1992 145 26 83 chr2 0 56 -250687798 - L1MA5 LINE L1 -3 6297 6239 1653 120 13 0 chr2 56 281 -250687573 - AluSq SINE Alu -85 228 1 1992 145 26 83 chr2 281 345 -250687509 - L1MA5 LINE L1 -61 6239 6173 423 0 0 0 chr2 345 392 -250687462 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1992 145 26 83 chr2 392 406 -250687448 - L1MA5 LINE L1 -127 6173 6160 1887 143 0 0 chr2 406 679 -250687175 - AluJb SINE Alu -28 284 12 1992 145 26 83 chr2 679 962 -250686892 - L1MA5 LINE L1 -140 6160 5902 1408 212 54 25 chr2 954 1282 -250686572 - L1M2 LINE L1 -4504 2345 2001 * 2186 72 0 0 chr2 1282 1545 -250686309 - AluY SINE Alu -48 263 1 1408 212 54 25 chr2 1545 1622 -250686232 - L1M2 LINE L1 -4848 2001 1928 780 195 0 0 chr2 1727 1855 -250685999 - FLAM_C SINE Alu -13 130 3 520 216 147 0 chr2 3471 3535 -250684319 - MER94 DNA DNA -1 133 80 2066 120 17 0 chr2 3535 3827 -250684027 - AluSx SINE Alu -15 297 1 520 216 147 0 chr2 3827 3878 -250683976 - MER94 DNA DNA -54 80 1 372 235 45 45 chr2 3884 4016 -250683838 + MIR3 SINE MIR 68 199 -9 31 0 0 0 chr2 8080 8111 -250679743 + AT_rich Low_complexity Low_complexity 1 31 0 196 321 46 18 chr2 8204 8313 -250679541 - L3b LINE CR1 -204 1379 1268 743 242 107 115 chr2 10223 10735 -250677119 + MLT1H LTR MaLR 42 549 0 2264 173 89 30 chr2 11097 11570 -250676284 + MLT1D LTR MaLR 5 505 0 377 270 59 26 chr2 11927 12079 -250675775 + MER67A LTR ERV1 387 543 0 1481 178 3 38 chr2 12760 13052 -250674802 - AluJo SINE Alu -18 294 13 273 322 16 16 chr2 13203 13324 -250674530 - MLT1H LTR MaLR -387 162 42 461 188 31 10 chr2 13659 13755 -250674099 + MER4A LTR ERV1 1 98 -566 1594 143 27 79 chr2 13755 14119 -250673735 + MER4A LTR ERV1 261 664 0 2696 118 3 6 chr2 15360 15725 -250672129 - THE1B LTR MaLR 0 364 1 11490 113 33 3 chr2 15725 17258 -250670596 - THE1B-int LTR MaLR 0 1580 1 2541 126 14 16 chr2 17258 17623 -250670231 - THE1B LTR MaLR 0 364 1 1844 135 0 82 chr2 18927 19246 -250668608 - MER4A LTR ERV1 0 664 372 264 263 197 0 chr2 19481 19618 -250668236 + MIR SINE MIR 32 195 -67 566 274 48 84 chr2 19894 20252 -250667602 - MLT1J1 LTR MaLR -37 409 65 286 309 40 24 chr2 21512 21638 -250666216 - L1ME3A LINE L1 -8 6162 6035 2071 231 57 19 chr2 21663 22186 -250665668 - MER90 LTR ERV1 0 614 72 200 295 90 41 chr2 23800 23922 -250663932 + MIR SINE MIR 20 147 -115 198 286 16 32 chr2 24001 24064 -250663790 + MIR3 SINE MIR 130 191 -17 197 275 0 0 chr2 24269 24309 -250663545 - L2 LINE L2 -14 3258 3219 * 239 313 153 14 chr2 24304 24448 -250663406 - MIR SINE MIR -93 169 6 1719 166 32 32 chr2 26067 26375 -250661479 + AluJo SINE Alu 1 308 -4 22 56 0 0 chr2 26456 26492 -250661362 + AT_rich Low_complexity Low_complexity 1 36 0 853 229 143 48 chr2 26493 26829 -250661025 - L1MC4 LINE L1 -437 7605 7238 1748 259 12 79 chr2 26831 27143 -250660711 - L1MC4a LINE L1 -803 7005 6674 1527 205 3 7 chr2 27143 27426 -250660428 + AluJo SINE Alu 1 282 -30 1748 259 12 79 chr2 27426 27533 -250660321 - L1MC4a LINE L1 -1134 6674 6635 342 0 0 0 chr2 27533 27571 -250660283 + (CA)n Simple_repeat Simple_repeat 2 39 0 1748 259 12 79 chr2 27571 27744 -250660110 - L1MC4a LINE L1 -1173 6635 6452 291 252 9 19 chr2 28247 28354 -250659500 + (TA)n Simple_repeat Simple_repeat 1 106 0 28 61 0 0 chr2 28412 28461 -250659393 + AT_rich Low_complexity Low_complexity 1 49 0 315 276 123 58 chr2 29005 29248 -250658606 + L1M4 LINE L1 2917 3175 -2971 880 228 106 26 chr2 29265 29577 -250658277 + L1M4 LINE L1 2142 2478 -3668 1652 138 0 0 chr2 29587 29826 -250658028 + L1P3 LINE L1 10 248 -6213 4742 131 58 99 chr2 29826 31256 -250656598 + pTR5 LTR ERV1 742 2433 -5 11163 107 15 14 chr2 31257 33063 -250654791 + L1P3 LINE L1 238 2041 -4420 3440 200 31 71 chr2 33063 34073 -250653781 + LTR5 LTR ERVK 1 969 0 11163 107 15 14 chr2 34073 34515 -250653339 + L1P3 LINE L1 2041 2499 -3962 22626 97 11 1 chr2 34515 38410 -250649444 + L1PA7 LINE L1 2254 6154 0 11163 107 15 14 chr2 38410 38444 -250649410 + L1P3 LINE L1 2499 2531 -3930 2023 61 4 8 chr2 38576 38838 -250649016 + AluY SINE Alu 34 294 -17 553 317 107 26 chr2 39186 39480 -250648374 - L2 LINE L2 -6 3307 3038 1628 122 35 8 chr2 39480 39735 -250648119 + AluSx SINE Alu 44 305 -7 553 317 107 26 chr2 39735 39959 -250647895 - L2 LINE L2 -275 3038 2742 24 53 0 0 chr2 40812 40850 -250647004 + AT_rich Low_complexity Low_complexity 1 38 0 349 350 106 0 chr2 41201 41381 -250646473 + MIR SINE MIR 49 247 -15 4491 172 86 19 chr2 41486 42520 -250645334 - L1MA4A LINE L1 -23 6982 5880 * 12065 197 19 11 chr2 42515 45098 -250642756 - L1MA4A LINE L1 -1221 5627 3022 10227 215 67 27 chr2 45426 46328 -250641526 - L1MA4A LINE L1 -3811 3037 2172 2103 121 3 0 chr2 46328 46618 -250641236 - AluSx SINE Alu -21 291 1 10227 215 67 27 chr2 46618 48437 -250639417 - L1MA4A LINE L1 -4676 2172 208 317 82 20 0 chr2 48689 48738 -250639116 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 26 0 0 0 chr2 49518 49544 -250638310 + AT_rich Low_complexity Low_complexity 1 26 0 226 296 101 16 chr2 49764 50011 -250637843 + L1ME4a LINE L1 5820 6087 -34 502 250 101 60 chr2 50508 50756 -250637098 - MIR SINE MIR 0 262 5 2315 103 0 0 chr2 51102 51402 -250636452 - AluSx SINE Alu -12 300 1 291 293 0 40 chr2 52047 52122 -250635732 + L2 LINE L2 3181 3252 -20 287 263 64 99 chr2 52543 52714 -250635140 - L3 LINE CR1 -350 1227 1063 2266 112 3 0 chr2 52906 53209 -250634645 + AluSx SINE Alu 1 304 -8 281 333 24 56 chr2 53224 53350 -250634504 + L2 LINE L2 3116 3237 -35 195 301 60 48 chr2 53516 53599 -250634255 - MIR SINE MIR -168 94 11 264 207 261 27 chr2 54790 54901 -250632953 + L2 LINE L2 3136 3272 0 2273 90 3 7 chr2 55311 55612 -250632242 + AluSc SINE Alu 1 300 -9 545 300 77 66 chr2 55723 56073 -250631781 - L2 LINE L2 -368 2946 2593 3759 227 55 2 chr2 56074 56923 -250630931 - MER45B DNA AcHobo -145 895 2 1543 208 5 49 chr2 56981 57191 -250630663 + Charlie4a DNA MER1_type 67 250 -1711 2060 111 7 24 chr2 57191 57489 -250630365 + AluSg SINE Alu 1 293 -17 1543 208 5 49 chr2 57489 57705 -250630149 + Charlie4a DNA MER1_type 250 474 -34 554 259 228 4 chr2 57724 57983 -250629871 - L2 LINE L2 -2959 355 39 318 218 45 115 chr2 58384 58457 -250629397 - HAL1 LINE L1 -1588 919 861 1939 117 28 14 chr2 58457 58748 -250629106 + AluSx SINE Alu 1 295 -17 318 218 45 115 chr2 58748 58830 -250629024 - HAL1 LINE L1 -1646 861 775 221 298 0 0 chr2 59532 59589 -250628265 + MER5B DNA MER1_type 122 178 0 492 229 144 8 chr2 60204 60322 -250627532 - MER94 DNA DNA 0 134 1 654 242 88 16 chr2 60660 60854 -250627000 - MIR SINE MIR -2 260 53 310 302 100 83 chr2 60954 61364 -250626490 - L2 LINE L2 -3 3269 2853 225 0 0 0 chr2 61470 61495 -250626359 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 335 252 93 0 chr2 64313 64420 -250623434 + MIR SINE MIR 100 216 -46 409 213 87 47 chr2 64442 64569 -250623285 - MIR SINE MIR -124 138 7 7411 54 5 13 chr2 65185 66662 -250621192 + SVA Other Other 1 1386 0 277 371 60 22 chr2 66778 67010 -250620844 - MIR SINE MIR -1 261 21 4387 189 9 40 chr2 67848 68848 -250619006 - L1 LINE L1 -1055 5091 4123 197 132 26 0 chr2 69017 69055 -250618799 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 573 270 20 14 chr2 69676 69824 -250618030 + MER5B DNA MER1_type 30 178 0 1921 169 3 3 chr2 69938 70246 -250617608 - AluJo SINE Alu -4 308 1 2148 103 3 0 chr2 71659 71941 -250615913 + AluSp SINE Alu 2 284 -29 1613 208 3 3 chr2 72110 72422 -250615432 + AluJb SINE Alu 1 312 0 336 222 247 31 chr2 72531 72693 -250615161 + L1ME3A LINE L1 5612 5808 -354 239 200 46 31 chr2 72722 72787 -250615067 - LTR43 LTR ERV1 -24 578 513 959 266 50 16 chr2 72875 73195 -250614659 - LTR43 LTR ERV1 -141 461 131 998 209 59 62 chr2 73276 73615 -250614239 + L1ME3A LINE L1 5825 6162 -8 3698 148 26 11 chr2 74109 74717 -250613137 + L1MC1 LINE L1 5709 6325 -8 2678 99 79 27 chr2 74718 75060 -250612794 + MSTA LTR MaLR 1 369 -59 1830 144 27 27 chr2 75060 75359 -250612495 + AluSx SINE Alu 1 299 -13 2678 99 79 27 chr2 75359 75421 -250612433 + MSTA LTR MaLR 369 426 -2 2454 208 73 7 chr2 76767 77333 -250610521 - L1MA9 LINE L1 -539 5773 5166 1922 181 20 75 chr2 77326 77834 -250610020 + L1MA9 LINE L1 5803 6282 -30 * 22 0 0 0 chr2 77834 77856 -250609998 + AT_rich Low_complexity Low_complexity 1 22 0 1157 218 20 110 chr2 77918 78317 -250609537 + MLT1A1 LTR MaLR 1 363 -2 2344 135 114 5 chr2 80626 81012 -250606842 - MSTA LTR MaLR 0 428 1 1931 73 0 8 chr2 81367 81614 -250606240 + AluY SINE Alu 54 298 -13 32 75 0 0 chr2 82008 82075 -250605779 + AT_rich Low_complexity Low_complexity 1 67 0 1804 87 0 0 chr2 82080 82310 -250605544 - PABL_A LTR ERV1 -430 230 1 10992 77 15 1 chr2 82310 83724 -250604130 - PABL_A-int LTR ERV1 0 5015 3583 198 208 188 0 chr2 83975 84023 -250603831 - L2 LINE L2 -249 3023 2967 270 247 0 55 chr2 84042 84115 -250603739 + L2 LINE L2 3242 3310 -3 312 291 81 12 chr2 84238 84410 -250603444 - L1MEc LINE L1 -4976 1587 1404 720 188 0 99 chr2 84478 84659 -250603195 + Tigger1 DNA MER2_type 1 163 -2255 * 1236 156 24 5 chr2 84641 84853 -250603001 + Tigger1 DNA MER2_type 2203 2418 0 7310 223 52 31 chr2 84853 84916 -250602938 - L1MEc LINE L1 -1913 4469 4409 2269 105 20 0 chr2 84916 85220 -250602634 - AluSp SINE Alu -3 310 1 7310 223 52 31 chr2 85220 85864 -250601990 - L1MEc LINE L1 -1973 4409 3780 192 77 0 0 chr2 85864 85890 -250601964 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 7310 223 52 31 chr2 85890 86784 -250601070 - L1MEc LINE L1 -2602 3780 2811 2187 170 31 0 chr2 86784 87137 -250600717 - THE1B LTR MaLR 0 364 1 7310 223 52 31 chr2 87137 87605 -250600249 - L1MEc LINE L1 -3571 2811 2354 2451 162 42 50 chr2 87609 88091 -250599763 + MER44D DNA MER2_type 4 481 -224 2371 136 48 112 chr2 88114 88778 -250599076 + MER4A LTR ERV1 1 465 0 1280 168 52 22 chr2 88780 89012 -250598842 + MER44D DNA MER2_type 479 589 -16 421 214 44 13 chr2 89016 89176 -250598678 - L1MEc LINE L1 -4018 2365 2202 671 91 10 20 chr2 89185 89284 -250598570 + MER4A LTR ERV1 1 98 -566 1649 103 45 91 chr2 89284 89646 -250598208 + MER4A LTR ERV1 261 664 0 328 255 41 0 chr2 89646 89744 -250598110 - L1MEc LINE L1 -4190 2194 2093 597 265 180 51 chr2 90523 90995 -250596859 - L1MEc LINE L1 -5381 991 459 538 166 32 35 chr2 91029 91184 -250596670 + MER51A LTR ERV1 1 154 -223 1631 174 46 10 chr2 91186 91490 -250596364 + MER51B LTR ERV1 63 377 0 330 242 74 34 chr2 91609 91758 -250596096 - HAL1b LINE L1 0 1348 1194 1210 65 130 0 chr2 92366 92535 -250595319 - LTR17 LTR ERV1 -2 778 588 898 85 0 0 chr2 92551 92669 -250595185 + AluY SINE Alu 187 304 -7 4898 67 0 3 chr2 92669 93269 -250594585 - LTR17 LTR ERV1 -182 598 1 2403 65 0 0 chr2 93269 93560 -250594294 - HERV17 LTR ERV1 0 8626 8336 303 98 0 0 chr2 93550 93591 -250594263 - HERV17 LTR ERV1 -1077 7549 7509 * 9680 47 10 0 chr2 93583 94731 -250593123 - HERV17 LTR ERV1 -2607 6019 4861 14584 45 4 3 chr2 94833 97002 -250590852 - HERV17 LTR ERV1 -4023 4603 2432 13791 70 17 26 chr2 97001 98835 -250589019 - HERV17 LTR ERV1 -6808 1818 1 * 6348 64 30 5 chr2 98835 99596 -250588258 - LTR17 LTR ERV1 0 780 1 218 340 53 0 chr2 100110 100204 -250587650 - L2 LINE L2 -262 3051 2953 1518 183 7 43 chr2 100827 101128 -250586726 + AluJb SINE Alu 1 290 -22 484 358 29 5 chr2 102674 102878 -250584976 + L3 LINE CR1 1261 1469 -108 7657 52 6 0 chr2 102962 104312 -250583542 + L1PA7 LINE L1 4793 6152 -2 208 308 91 28 chr2 105400 105543 -250582311 + MIR SINE MIR 36 187 -75 4364 192 56 10 chr2 106711 108046 -250579808 + L1MC2 LINE L1 4791 6170 -174 196 270 27 40 chr2 108747 108821 -250579033 + MIR3 SINE MIR 84 156 -52 32 0 0 0 chr2 108911 108943 -250578911 + AT_rich Low_complexity Low_complexity 1 32 0 378 61 0 0 chr2 109715 109764 -250578090 + (CA)n Simple_repeat Simple_repeat 2 50 0 2636 51 0 0 chr2 110276 110587 -250577267 + AluY SINE Alu 1 311 0 233 250 40 13 chr2 110740 110816 -250577038 - HsTC2 DNA Tc2 -1820 78 1 264 269 75 32 chr2 112932 113025 -250574829 + HAL1 LINE L1 806 902 -1605 450 219 0 0 chr2 113144 113249 -250574605 + (CATATA)n Simple_repeat Simple_repeat 2 106 0 713 136 19 0 chr2 113249 113352 -250574502 - AluSx SINE Alu -16 293 189 969 149 0 0 chr2 113352 113493 -250574361 - AluSx SINE Alu -172 141 1 22 0 0 0 chr2 113594 113616 -250574238 + AT_rich Low_complexity Low_complexity 1 22 0 1870 167 17 0 chr2 116057 116356 -250571498 + AluSx SINE Alu 1 304 -8 3196 103 38 0 chr2 117228 117324 -250570530 + L1PB1 LINE L1 5684 5775 -376 182 37 37 0 chr2 117324 117351 -250570503 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 324 0 0 0 chr2 117350 117386 -250570468 + (CA)n Simple_repeat Simple_repeat 2 37 0 3196 103 38 0 chr2 117351 117737 -250570117 + L1PB1 LINE L1 5775 6148 -3 637 307 32 42 chr2 118728 119158 -250568696 + LTR35 LTR ERV1 141 556 0 1559 256 22 24 chr2 119163 119577 -250568277 + LTR35-int LTR ERV1 5 417 -1369 1005 96 0 20 chr2 119585 119731 -250568123 + L1PA4 LINE L1 6012 6154 -1 5983 176 49 36 chr2 119812 121105 -250566749 + LTR57-int LTR ERVL 288 1596 -3747 * 6258 159 79 78 chr2 120157 122450 -250565404 + LTR35-int LTR ERV1 682 4183 -2148 625 135 76 189 chr2 122586 122771 -250565083 + LOR1-int LTR ERV1 3786 3949 -4171 367 93 30 81 chr2 122897 122997 -250564857 + LOR1-int LTR ERV1 4602 4682 -1264 1108 189 5 5 chr2 123001 123191 -250564663 + LOR1-int LTR ERV1 6908 7097 -1023 4043 153 59 22 chr2 123194 123480 -250564374 + MER49 LTR ERV1 1 275 -648 2619 127 16 0 chr2 123480 123849 -250564005 + THE1C LTR MaLR 1 375 0 4043 153 59 22 chr2 123849 124294 -250563560 + MER49 LTR ERV1 275 759 -164 365 282 71 81 chr2 124481 124852 -250563002 + LOR1-int LTR ERV1 4971 7466 -654 736 270 59 55 chr2 125043 125495 -250562359 + LTR35 LTR ERV1 88 556 0 23 0 0 0 chr2 125615 125638 -250562216 + AT_rich Low_complexity Low_complexity 1 23 0 1104 277 108 36 chr2 125792 126290 -250561564 + MLT1E LTR MaLR 52 585 -8 225 0 0 0 chr2 126294 126319 -250561535 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 481 234 70 88 chr2 126335 126562 -250561292 + L1MC4 LINE L1 7820 8042 0 2795 168 25 41 chr2 126677 127194 -250560660 - LTR22 LTR ERVK 0 509 1 819 115 0 0 chr2 127384 127514 -250560340 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 1607 210 49 3 chr2 127840 128187 -250559667 + MLT1A1 LTR MaLR 1 363 -2 331 313 146 18 chr2 128261 128536 -250559318 + L1MEd LINE L1 602 911 -5723 437 295 100 33 chr2 128825 129205 -250558649 + L1MEd LINE L1 1220 1716 -4971 415 323 46 5 chr2 129218 129413 -250558441 + L2 LINE L2 2636 2838 -476 516 253 133 28 chr2 129495 129744 -250558110 + L2 LINE L2 3039 3313 0 26 30 0 0 chr2 131058 131091 -250556763 + AT_rich Low_complexity Low_complexity 1 33 0 305 328 61 22 chr2 131297 131477 -250556377 - MIR SINE MIR -43 219 33 6387 102 48 1 chr2 132128 133055 -250554799 - Tigger1 DNA MER2_type -777 1641 672 605 203 47 20 chr2 133300 133448 -250554406 - L1MC2 LINE L1 -9 6335 6184 376 238 139 112 chr2 134146 134676 -250553178 + L1M2 LINE L1 455 1434 -5415 448 66 0 0 chr2 134886 134947 -250552907 + Alu SINE Alu 235 295 -14 284 62 0 21 chr2 135352 135400 -250552454 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 51 0 0 chr2 135618 135657 -250552197 + AT_rich Low_complexity Low_complexity 1 39 0 2252 248 95 11 chr2 135803 136509 -250551345 - L1ME1 LINE L1 -128 6107 5343 1109 213 49 0 chr2 136524 136787 -250551067 - L1MA4 LINE L1 -11 6289 6014 360 271 43 7 chr2 136883 137023 -250550831 - L1ME1 LINE L1 -5000 1396 1252 243 278 47 53 chr2 137103 137314 -250550540 - L1ME LINE L1 -4723 1278 778 475 310 90 29 chr2 137720 138097 -250549757 - L2 LINE L2 -662 2652 2253 21 0 0 0 chr2 138759 138780 -250549074 + AT_rich Low_complexity Low_complexity 1 21 0 1732 188 28 17 chr2 139330 139691 -250548163 + MLT1A1 LTR MaLR 1 365 0 263 28 28 0 chr2 140227 140263 -250547591 + (TAA)n Simple_repeat Simple_repeat 3 39 0 246 269 51 0 chr2 141120 141198 -250546656 - MIR SINE MIR -95 167 86 472 193 11 0 chr2 142486 142574 -250545280 + MER20 DNA MER1_type 129 217 -2 216 226 32 16 chr2 143215 143277 -250544577 - MIR SINE MIR -172 90 28 435 223 48 0 chr2 145221 145324 -250542530 - Charlie2 DNA MER1_type -892 1970 1863 376 365 68 4 chr2 145354 145617 -250542237 - Charlie2 DNA MER1_type -2502 280 1 325 286 20 34 chr2 146387 146534 -250541320 + L1MC4a LINE L1 5296 5440 -681 326 332 50 23 chr2 147255 147604 -250540250 + L1MC4a LINE L1 5531 5819 -302 21 0 0 0 chr2 147612 147633 -250540221 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 147934 147955 -250539899 + (TG)n Simple_repeat Simple_repeat 2 22 0 2878 10 0 0 chr2 149492 149798 -250538056 + AluYa5 SINE Alu 1 306 -5 1451 167 29 8 chr2 150574 150814 -250537040 - AluSx SINE Alu -28 284 40 22 35 0 0 chr2 151244 151273 -250536581 + AT_rich Low_complexity Low_complexity 1 29 0 240 149 0 0 chr2 151522 151569 -250536285 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 2387 70 0 0 chr2 152488 152788 -250535066 - L1PA6 LINE L1 0 6154 5855 234 269 160 9 chr2 152792 153004 -250534850 + L1ME4a LINE L1 5865 6108 -13 187 317 29 10 chr2 154506 154610 -250533244 - MIR SINE MIR 0 262 157 2315 90 10 3 chr2 154921 155221 -250532633 - AluSq SINE Alu -11 302 1 207 266 11 68 chr2 156146 156323 -250531531 + (CAGGG)n Simple_repeat Simple_repeat 1 167 0 272 250 64 70 chr2 156349 156509 -250531345 + MIR SINE MIR 58 216 -46 378 316 9 47 chr2 156509 156724 -250531130 + MIR SINE MIR 1 207 -55 1059 182 20 20 chr2 157623 157876 -250529978 + L1MA4 LINE L1 6044 6296 -4 326 220 180 20 chr2 158112 158304 -250529550 + LTR52 LTR ERVL 9 169 -252 378 0 0 0 chr2 158304 158346 -250529508 + (TG)n Simple_repeat Simple_repeat 1 42 0 326 220 180 20 chr2 158346 158398 -250529456 + LTR52 LTR ERVL 169 397 -24 586 231 118 18 chr2 159250 159419 -250528435 + MER105 DNA DNA 1 186 -18 6378 232 63 56 chr2 159756 162766 -250525088 + L1M4b LINE L1 15 3035 -3922 231 36 0 0 chr2 162766 162794 -250525060 + (CAA)n Simple_repeat Simple_repeat 2 29 0 6378 232 63 56 chr2 162794 163671 -250524183 + L1M4b LINE L1 3035 3904 -3053 359 221 132 29 chr2 163676 163812 -250524042 + LTR16A1 LTR ERVL 296 445 -12 222 196 22 0 chr2 163823 163869 -250523985 + MIR SINE MIR 70 116 -146 247 282 155 0 chr2 164297 164400 -250523454 + L1ME LINE L1 5532 5650 -471 21 36 0 0 chr2 164572 164600 -250523254 + AT_rich Low_complexity Low_complexity 1 28 0 285 300 17 33 chr2 165443 165563 -250522291 + MER20 DNA MER1_type 100 217 -2 973 149 6 6 chr2 165732 165907 -250521947 + L1MB2 LINE L1 5288 5462 -721 3651 159 88 45 chr2 165923 167302 -250520552 - pTR5 LTR ERV1 -23 1683 31 1118 227 28 18 chr2 167305 167587 -250520267 + L1MB2 LINE L1 5885 6169 -2 246 128 0 0 chr2 167796 167835 -250520019 + (T)n Simple_repeat Simple_repeat 1 39 0 1660 113 0 0 chr2 167843 168055 -250519799 - AluSg SINE Alu -98 212 1 245 270 261 0 chr2 170733 170848 -250517006 - L1M4 LINE L1 -5477 1157 1013 921 232 161 39 chr2 171339 171899 -250515955 - MER92B LTR ERV1 -8 628 1 217 266 101 0 chr2 175243 175322 -250512532 + L2 LINE L2 3210 3296 -17 200 341 103 48 chr2 175471 175597 -250512257 - L2 LINE L2 -3 3269 3137 213 315 46 8 chr2 176050 176180 -250511674 - MIR SINE MIR -119 143 9 279 236 88 54 chr2 177785 177933 -250509921 - L1MC4a LINE L1 -1424 6384 6232 1333 193 227 14 chr2 178016 178369 -250509485 + MSTA LTR MaLR 1 428 0 416 244 25 10 chr2 179009 179146 -250508708 - L1M4 LINE L1 -5924 710 14 2176 122 140 8 chr2 179541 179919 -250507935 + MSTA LTR MaLR 1 428 0 3688 112 11 53 chr2 180453 181061 -250506793 + MER4B LTR ERV1 1 583 -27 543 101 0 0 chr2 182619 182698 -250505156 + (GGAA)n Simple_repeat Simple_repeat 3 81 0 34467 55 11 14 chr2 182798 187064 -250500790 - HERV17 LTR ERV1 -4377 4249 1 6059 62 30 5 chr2 187064 187825 -250500029 - LTR17 LTR ERV1 0 780 1 1240 226 98 18 chr2 238018 238457 -250449397 + HERV3 LTR ERV1 3412 3960 -976 1587 229 60 86 chr2 238530 239028 -250448826 + HERV3 LTR ERV1 3605 4089 -782 2781 244 2 0 chr2 239128 239657 -250448197 + HERV3 LTR ERV1 1175 1704 -6722 1987 229 11 0 chr2 239756 240127 -250447727 + HERV3 LTR ERV1 1634 2008 -6418 1240 115 6 33 chr2 240127 240310 -250447544 + AluSc SINE Alu 1 178 -131 593 234 14 7 chr2 240411 240552 -250447302 - Tigger1 DNA MER2_type -2275 143 2 673 188 108 5 chr2 240565 240751 -250447103 - L1MCa LINE L1 -3950 2476 2272 752 158 68 15 chr2 240753 240886 -250446968 - AluJ SINE Alu -16 296 157 638 213 41 0 chr2 241014 241136 -250446718 - AluJ SINE Alu -140 172 46 995 175 62 42 chr2 241160 241401 -250446453 - L1MCa LINE L1 -4175 2251 2001 2017 141 0 10 chr2 241401 241699 -250446155 + AluY SINE Alu 1 295 -16 995 175 62 42 chr2 241699 241765 -250446089 - L1MCa LINE L1 -4425 2001 1938 316 26 0 136 chr2 241885 242076 -250445778 + (GGGAGA)n Simple_repeat Simple_repeat 1 165 0 268 261 34 23 chr2 246201 246289 -250441565 - MLT1J2 LTR MaLR 0 450 362 324 316 24 36 chr2 246389 246557 -250441297 - MLT1J1 LTR MaLR -241 205 40 208 146 0 24 chr2 248475 248516 -250439338 + (CCCCCA)n Simple_repeat Simple_repeat 1 40 0 181 191 43 0 chr2 248793 248840 -250439014 - MIR SINE MIR -66 142 94 485 216 27 20 chr2 249115 249258 -250438596 + MSTC LTR MaLR 20 162 -203 512 244 189 11 chr2 250383 250563 -250437291 + MER20 DNA MER1_type 1 212 -7 362 283 65 62 chr2 252316 252687 -250435167 + L2 LINE L2 2941 3312 -1 4198 213 23 13 chr2 252875 254140 -250433714 + L1MB3 LINE L1 4898 6181 -2 451 299 81 15 chr2 258765 259099 -250428755 - L2 LINE L2 -734 2580 2225 26 0 0 0 chr2 259667 259693 -250428161 + AT_rich Low_complexity Low_complexity 1 26 0 343 267 114 23 chr2 260406 260537 -250427317 + Charlie8 DNA MER1_type 14 156 -2261 25 0 0 0 chr2 260761 260786 -250427068 + AT_rich Low_complexity Low_complexity 1 25 0 1873 150 0 27 chr2 260983 261276 -250426578 + AluJb SINE Alu 1 285 -27 208 237 26 35 chr2 261325 261439 -250426415 + A-rich Low_complexity Low_complexity 3 115 0 296 162 68 14 chr2 261482 261556 -250426298 - MER116 DNA Mariner -2 78 1 762 240 55 87 chr2 261777 262124 -250425730 - MLT1A1 LTR MaLR 0 365 29 4585 188 46 23 chr2 262126 262841 -250425013 - L1 LINE L1 -841 5305 4608 1796 96 46 0 chr2 262841 263081 -250424773 - AluY SINE Alu -20 291 41 4585 188 46 23 chr2 263081 263201 -250424653 - L1 LINE L1 -1538 4608 4492 4987 60 3 8 chr2 263201 263830 -250424024 - L1PA8 LINE L1 -1 6171 5546 4585 188 46 23 chr2 263830 264024 -250423830 - L1 LINE L1 -1654 4492 4248 324 0 0 0 chr2 264024 264060 -250423794 + (TG)n Simple_repeat Simple_repeat 2 37 0 4585 188 46 23 chr2 264060 264096 -250423758 - L1 LINE L1 -1898 4248 4214 1512 161 59 3 chr2 264232 264554 -250423300 - L1 LINE L1 -2437 3709 3370 983 267 64 20 chr2 264563 264953 -250422901 - L1 LINE L1 -3090 3056 2650 185 229 82 0 chr2 265213 265274 -250422580 + MIR SINE MIR 47 112 -150 1554 199 7 34 chr2 266416 266712 -250421142 - AluJb SINE Alu -24 288 1 10643 93 68 11 chr2 267450 269476 -250418378 - L1PBa LINE L1 -3938 2925 634 1295 152 0 0 chr2 269476 269674 -250418180 - L1PBa LINE L1 -6663 200 3 261 83 0 0 chr2 270913 270949 -250416905 + (TA)n Simple_repeat Simple_repeat 1 36 0 470 228 179 55 chr2 271804 272062 -250415792 - MLT1H LTR MaLR 0 549 314 1277 239 38 11 chr2 272147 272591 -250415263 + L1ME2 LINE L1 2121 2576 -3570 5331 255 91 37 chr2 272600 274409 -250413445 + L1ME2 LINE L1 2835 4544 -1620 6107 23 0 10 chr2 274409 275116 -250412738 + L1PA3 LINE L1 5452 6151 -4 5331 255 91 37 chr2 275116 276363 -250411491 + L1ME2 LINE L1 4544 6064 -100 1333 241 95 28 chr2 276363 276836 -250411018 + MLT1D LTR MaLR 1 505 0 5331 255 91 37 chr2 276836 276905 -250410949 + L1ME2 LINE L1 6064 6128 -36 2525 117 14 3 chr2 277256 277616 -250410238 + THE1B LTR MaLR 1 364 0 9795 116 38 38 chr2 277616 279196 -250408658 + THE1B-int LTR MaLR 1 1580 0 2239 124 74 0 chr2 279196 279535 -250408319 + THE1B LTR MaLR 1 364 0 225 203 72 29 chr2 279671 279740 -250408114 + L1ME2 LINE L1 6057 6128 -36 21 57 0 0 chr2 279851 279886 -250407968 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 281586 281609 -250406245 + AT_rich Low_complexity Low_complexity 1 23 0 1171 125 0 0 chr2 281843 282003 -250405851 - AluSg/x SINE Alu -16 294 135 1169 284 51 19 chr2 282403 282928 -250404926 + HAL1 LINE L1 799 1340 -1167 298 287 81 23 chr2 283179 283353 -250404501 + HAL1 LINE L1 2019 2202 -305 995 251 95 10 chr2 283614 283909 -250403945 + MER82 DNA MER2_type 306 625 -28 513 209 98 20 chr2 284414 284567 -250403287 - L1MB5 LINE L1 0 6174 6010 569 278 17 26 chr2 284575 284805 -250403049 + HAL1 LINE L1 1019 1246 -1261 4550 204 73 75 chr2 284905 286459 -250401395 - L1M4 LINE L1 -848 5298 3749 242 299 0 31 chr2 287571 287668 -250400186 + CT-rich Low_complexity Low_complexity 3 96 0 1755 157 14 17 chr2 288860 289154 -250398700 + AluJo SINE Alu 2 294 -18 5132 163 31 31 chr2 289478 290192 -250397662 - L1MA8 LINE L1 -4 6287 5573 2139 125 0 0 chr2 290192 290489 -250397365 + AluSx SINE Alu 1 297 -15 5132 163 31 31 chr2 290489 291022 -250396832 - L1MA8 LINE L1 -717 5574 5042 2341 186 28 24 chr2 291023 291491 -250396363 + L1MA8 LINE L1 4567 5036 -1110 21 0 0 0 chr2 291499 291520 -250396334 + AT_rich Low_complexity Low_complexity 1 21 0 1025 190 22 0 chr2 291568 291747 -250396107 - AluJb SINE Alu -3 309 127 809 278 69 39 chr2 292199 292606 -250395248 + L1ME4a LINE L1 5502 5920 -201 198 171 0 0 chr2 292841 292882 -250394972 + (TTA)n Simple_repeat Simple_repeat 2 42 0 358 238 48 55 chr2 293483 293671 -250394183 - MLT1A2 LTR MaLR -181 209 7 3045 148 30 0 chr2 294242 294748 -250393106 - L1MA4A LINE L1 0 6303 5783 249 266 0 0 chr2 294748 294842 -250393012 + (TG)n Simple_repeat Simple_repeat 2 95 0 1063 156 14 46 chr2 294845 295063 -250392791 - L1MA4A LINE L1 -514 5789 5579 260 245 21 32 chr2 296262 296356 -250391498 + L1ME3A LINE L1 5348 5440 -681 2168 144 69 15 chr2 297377 297781 -250390073 + MSTA LTR MaLR 1 426 -2 256 343 35 47 chr2 299652 299993 -250387861 + L1ME3A LINE L1 5609 5945 -225 239 261 14 0 chr2 300345 300414 -250387440 - MER5A DNA MER1_type -84 105 36 227 270 0 0 chr2 300508 300571 -250387283 + L1P LINE L1 4940 5002 -1144 703 271 171 39 chr2 300776 301395 -250386459 + L1MC4a LINE L1 5267 5967 -1841 1512 233 30 30 chr2 301535 301995 -250385859 - MLT1C LTR MaLR -2 465 6 333 194 32 0 chr2 302070 302132 -250385722 - AluJ/FLAM SINE Alu -216 86 23 531 256 70 44 chr2 302719 302989 -250384865 - MER97a DNA MER1_type? -16 878 602 845 106 12 32 chr2 302991 303235 -250384619 + (TTTC)n Simple_repeat Simple_repeat 1 239 0 722 167 13 51 chr2 303263 303419 -250384435 - FRAM SINE Alu 0 176 27 721 246 99 9 chr2 303463 303695 -250384159 - MER97b DNA MER1_type? -780 273 21 276 30 0 0 chr2 304051 304084 -250383770 + (TTA)n Simple_repeat Simple_repeat 2 34 0 181 211 0 0 chr2 305994 306032 -250381822 - MIR SINE MIR -67 141 104 669 213 35 0 chr2 306157 306298 -250381556 + MER20 DNA MER1_type 5 150 -69 440 247 283 11 chr2 306303 306586 -250381268 - MER57A LTR ERV1 -2 401 42 198 407 12 0 chr2 307325 307406 -250380448 + L2 LINE L2 3187 3268 -4 1267 191 100 16 chr2 308598 308918 -250378936 + MLT2C1 LTR ERVL 3 349 -48 467 182 30 0 chr2 310227 310326 -250377528 - MLT2C1 LTR ERVL -295 102 1 444 206 178 14 chr2 312679 312825 -250375029 - MER21B LTR ERV1 -365 498 329 392 51 0 17 chr2 317545 317604 -250370250 + L1PA6 LINE L1 6097 6154 0 186 289 0 0 chr2 318100 318152 -250369702 + L2 LINE L2 3262 3313 0 26 0 0 0 chr2 319458 319484 -250368370 + AT_rich Low_complexity Low_complexity 1 26 0 3290 145 6 15 chr2 320157 320687 -250367167 - MER1A DNA MER1_type -2 525 1 1670 195 33 0 chr2 322396 322698 -250365156 - AluJo SINE Alu 0 312 1 2489 111 45 0 chr2 324734 325093 -250362761 - THE1C LTR MaLR 0 375 1 321 303 82 65 chr2 326132 326485 -250361369 + HAL1b LINE L1 324 682 -666 402 276 77 7 chr2 326946 327146 -250360708 + L1M4 LINE L1 4061 4274 -1872 2310 185 18 25 chr2 327173 327410 -250360444 - Tigger2 DNA MER2_type 0 2718 2484 2527 60 0 3 chr2 327410 327711 -250360143 + AluY SINE Alu 1 300 -11 2310 185 18 25 chr2 327711 327922 -250359932 - Tigger2 DNA MER2_type -234 2484 2273 450 159 0 0 chr2 327912 327981 -250359873 - Tigger2 DNA MER2_type -2649 69 1 * 425 337 101 45 chr2 328147 328681 -250359173 - L1MEd LINE L1 -5003 1116 553 2090 181 37 16 chr2 329219 329655 -250358199 + MER65A LTR ERV1 1 445 0 2610 64 0 0 chr2 334654 334965 -250352889 - AluY SINE Alu 0 311 1 210 359 41 14 chr2 335260 335405 -250352449 - MIR SINE MIR -27 235 87 27 0 0 0 chr2 337645 337672 -250350182 + AT_rich Low_complexity Low_complexity 1 27 0 339 286 97 10 chr2 339387 339583 -250348271 + L1MDa LINE L1 188 400 -6140 725 219 38 50 chr2 340176 340414 -250347440 + L1MDa LINE L1 1048 1282 -5261 721 241 66 38 chr2 340425 340744 -250347110 - L1MDa LINE L1 -4344 2196 1869 356 69 0 52 chr2 340766 340824 -250347030 + Alu SINE Alu 248 302 0 305 313 91 0 chr2 340869 340968 -250346886 + L1MDa LINE L1 2091 2198 -4342 1044 98 0 0 chr2 341068 341211 -250346643 - L1P4 LINE L1 -449 5719 5577 887 102 0 0 chr2 341214 341352 -250346502 + L1P4 LINE L1 5410 5547 -621 246 277 0 15 chr2 341770 341835 -250346019 + CT-rich Low_complexity Low_complexity 5 68 0 631 288 245 8 chr2 343194 343725 -250344129 + L2 LINE L2 1294 1950 -1364 386 298 0 10 chr2 345791 345895 -250341959 + (CGTG)n Simple_repeat Simple_repeat 1 103 0 351 286 0 0 chr2 345909 346087 -250341767 + (TG)n Simple_repeat Simple_repeat 1 178 0 320 280 126 14 chr2 346448 346591 -250341263 + MIR SINE MIR 104 262 0 2074 116 7 0 chr2 347018 347312 -250340542 + AluSq SINE Alu 4 299 -14 248 305 107 15 chr2 347415 347546 -250340308 - MIR SINE MIR -89 173 31 352 237 13 0 chr2 348968 349120 -250338734 + (TG)n Simple_repeat Simple_repeat 1 154 0 627 188 0 18 chr2 351291 351456 -250336398 + CT-rich Low_complexity Low_complexity 1 162 0 200 300 83 0 chr2 351621 351681 -250336173 - L2 LINE L2 0 3272 3208 356 69 0 52 chr2 352545 352603 -250335251 + Alu SINE Alu 248 302 0 1654 233 43 31 chr2 352648 353435 -250334419 + L1MD1 LINE L1 2091 2890 -3650 836 148 32 0 chr2 353435 353590 -250334264 + L1MB2 LINE L1 6009 6168 -3 1654 233 43 31 chr2 353590 353717 -250334137 + L1MD1 LINE L1 2890 3014 -3526 2828 128 12 16 chr2 353758 353924 -250333930 - MSTA LTR MaLR 0 428 263 2884 107 81 2 chr2 353924 354303 -250333551 + MLT2A2 LTR ERVL 1 418 -35 519 17 0 0 chr2 354303 354363 -250333491 + (TA)n Simple_repeat Simple_repeat 2 61 0 2884 107 81 2 chr2 354363 354403 -250333451 + MLT2A2 LTR ERVL 418 453 0 2828 128 12 16 chr2 354403 354666 -250333188 - MSTA LTR MaLR -165 263 1 1906 293 108 11 chr2 354666 356049 -250331805 + L1MD1 LINE L1 3050 4579 -1961 594 120 40 0 chr2 356049 356149 -250331705 + MLT1B LTR MaLR 1 104 -286 300 295 0 42 chr2 356178 356273 -250331581 - Tigger7 DNA MER2_type -8 2479 2389 * 1210 238 15 8 chr2 356271 356536 -250331318 - Tigger7 DNA MER2_type -466 267 1 * 1302 161 25 84 chr2 356536 356846 -250331008 + MLT1B LTR MaLR 100 390 0 2005 270 36 8 chr2 356846 357568 -250330286 + L1MD1 LINE L1 4575 5316 -1224 2040 237 63 38 chr2 357578 358511 -250329343 + L1MD1 LINE L1 5358 6390 -246 267 103 0 0 chr2 358511 358550 -250329304 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 2040 237 63 38 chr2 358550 358804 -250329050 + L1MD1 LINE L1 6390 6636 0 426 368 96 15 chr2 358965 359237 -250328617 + HAL1 LINE L1 32 325 -2182 475 256 144 6 chr2 359298 359458 -250328396 + MER5A DNA MER1_type 8 189 0 247 326 259 0 chr2 359554 359701 -250328153 - MER5A DNA MER1_type -1 188 4 414 286 36 0 chr2 359710 359850 -250328004 - MER5B DNA MER1_type -23 155 11 323 305 55 8 chr2 359851 359979 -250327875 + HAL1 LINE L1 476 609 -1898 228 300 90 0 chr2 361387 361487 -250326367 - LTR33A LTR ERVL -14 509 401 854 275 43 39 chr2 361770 362253 -250325601 - HAL1 LINE L1 -954 1553 1069 750 163 24 36 chr2 362259 362425 -250325429 + MER53 DNA DNA 1 164 -25 720 291 171 71 chr2 362430 363206 -250324648 - HAL1 LINE L1 -1399 1108 255 2232 121 129 5 chr2 363515 363896 -250323958 - MSTA LTR MaLR 0 428 1 2390 190 95 15 chr2 365631 366178 -250321676 + LTR59 LTR ERV1 1 591 -6 370 326 62 31 chr2 366826 367050 -250320804 - L3 LINE CR1 -730 847 617 225 188 42 0 chr2 367598 367646 -250320208 + MLT1I LTR MaLR 320 369 -40 221 321 107 13 chr2 368983 369142 -250318712 + MIR SINE MIR 21 194 -68 390 226 0 0 chr2 369337 369443 -250318411 + (TG)n Simple_repeat Simple_repeat 1 106 0 2650 214 97 6 chr2 369559 370196 -250317658 + MER44D DNA MER2_type 2 696 -9 192 306 0 0 chr2 370399 370448 -250317406 + L2 LINE L2 3261 3309 -4 183 129 0 0 chr2 370805 370836 -250317018 + (TCCA)n Simple_repeat Simple_repeat 3 33 0 530 115 36 24 chr2 370853 371018 -250316836 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 21 0 0 0 chr2 372629 372650 -250315204 + AT_rich Low_complexity Low_complexity 1 21 0 485 121 77 0 chr2 373047 373138 -250314716 - L1PA13 LINE L1 0 6163 6066 195 375 0 0 chr2 373631 373695 -250314159 + L2 LINE L2 3206 3269 -3 282 29 0 0 chr2 373775 373810 -250314044 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 292 319 113 12 chr2 375378 375538 -250312316 + MER5A DNA MER1_type 1 176 -13 296 336 64 0 chr2 375556 375681 -250312173 - L3 LINE CR1 -156 1421 1289 2443 174 54 19 chr2 377179 377645 -250310209 + MER49 LTR ERV1 441 922 -1 1019 285 67 86 chr2 379159 380355 -250307499 + L1MEc LINE L1 1309 2630 -3933 2278 212 19 24 chr2 380361 380542 -250307312 + L1 LINE L1 4695 4875 -1271 3418 82 14 0 chr2 380542 380980 -250306874 + MLT2A1 LTR ERVL 1 444 0 2278 212 19 24 chr2 380980 381373 -250306481 + L1 LINE L1 4875 5266 -880 1621 166 65 9 chr2 381473 381798 -250306056 - MER49 LTR ERV1 -580 343 1 198 103 0 0 chr2 382861 382890 -250304964 + (TG)n Simple_repeat Simple_repeat 1 29 0 183 361 24 0 chr2 384045 384128 -250303726 + MIR SINE MIR 26 110 -152 352 265 66 22 chr2 385857 385993 -250301861 - L1ME4a LINE L1 -5 6116 5975 245 304 173 20 chr2 386162 386520 -250301334 - L1ME4a LINE L1 -382 5739 5327 40 67 0 0 chr2 386520 386595 -250301259 + AT_rich Low_complexity Low_complexity 1 75 0 24 32 0 0 chr2 387236 387267 -250300587 + AT_rich Low_complexity Low_complexity 1 31 0 601 307 116 59 chr2 387366 387937 -250299917 + HAL1b LINE L1 567 902 -944 344 331 180 0 chr2 387938 388110 -250299744 + HAL1b LINE L1 939 1141 -705 702 260 83 56 chr2 388202 388541 -250299313 + L1M4 LINE L1 2932 3279 -2867 398 328 43 14 chr2 388773 389194 -250298660 + L1M4 LINE L1 4724 5156 -990 2962 253 59 30 chr2 389258 390347 -250297507 + L1MB7 LINE L1 382 1501 -5041 1260 216 88 15 chr2 390347 390676 -250297178 - MLT1A1 LTR MaLR -3 362 10 1626 241 50 8 chr2 390694 391076 -250296778 - MLT1A1-int LTR MaLR -8 1727 1330 418 174 0 0 chr2 391244 391313 -250296541 - MLT1A1-int LTR MaLR -988 747 679 2788 206 16 21 chr2 391445 392026 -250295828 - MLT1A1-int LTR MaLR -1078 657 80 621 247 70 0 chr2 392128 392314 -250295540 + L1MB7 LINE L1 5153 5351 -1293 1699 227 118 12 chr2 392328 392830 -250295024 + L1MB7 LINE L1 6055 6609 -73 4926 208 25 6 chr2 392875 393963 -250293891 + L1PA15 LINE L1 1281 2399 -4398 * 5045 164 37 25 chr2 393952 395681 -250292173 + L1PA15 LINE L1 5082 6816 0 276 125 0 54 chr2 395695 395751 -250292103 + L1MB8 LINE L1 6125 6177 -1 2089 108 0 0 chr2 395759 396047 -250291807 + AluSg SINE Alu 1 288 -22 454 197 57 16 chr2 396055 396177 -250291677 + L1MC4a LINE L1 5365 5491 -2317 1039 270 48 64 chr2 396294 396809 -250291045 + L1MC4a LINE L1 5481 5987 -1821 365 278 81 73 chr2 396987 397260 -250290594 + L1MC4a LINE L1 6166 6440 -1368 294 165 18 49 chr2 397876 398040 -250289814 + GA-rich Low_complexity Low_complexity 2 160 0 259 273 112 56 chr2 398892 399053 -250288801 - L2 LINE L2 -18 3295 3126 443 272 180 22 chr2 399163 399663 -250288191 - L2 LINE L2 -338 2976 2398 340 231 204 0 chr2 400035 400143 -250287711 - L2 LINE L2 -908 2406 2277 48 0 0 0 chr2 401303 401351 -250286503 + AT_rich Low_complexity Low_complexity 1 48 0 699 219 44 61 chr2 401916 402144 -250285710 - L1MC1 LINE L1 0 6333 6110 23 33 0 0 chr2 402517 402547 -250285307 + AT_rich Low_complexity Low_complexity 1 30 0 384 121 0 0 chr2 402572 402630 -250285224 - MADE1 DNA Mariner -2 78 21 185 367 52 29 chr2 404700 404910 -250282944 + L2 LINE L2 2107 2321 -993 184 235 62 49 chr2 407269 407350 -250280504 + L3b LINE CR1 1243 1324 -259 1180 203 37 37 chr2 410255 410365 -250277489 - L1MC2 LINE L1 -1 6343 6234 2270 92 0 0 chr2 410365 410668 -250277186 - AluY SINE Alu -8 303 1 1180 203 37 37 chr2 410668 410878 -250276976 - L1MC2 LINE L1 -109 6235 6023 * 3474 218 121 38 chr2 410875 411742 -250276112 - L1MCb LINE L1 -4509 2055 1261 2009 110 0 7 chr2 411742 412024 -250275830 + AluSx SINE Alu 1 280 -32 351 0 0 0 chr2 412026 412065 -250275789 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 3474 218 121 38 chr2 412065 412840 -250275014 - L1MCb LINE L1 -5303 1261 216 2579 128 5 3 chr2 412840 413214 -250274640 + THE1C LTR MaLR 1 375 0 3474 218 121 38 chr2 413214 413448 -250274406 - L1MCb LINE L1 -6348 216 3 2056 107 0 0 chr2 415314 415618 -250272236 - AluSg SINE Alu 0 304 1 203 402 20 10 chr2 415630 415732 -250272122 + MIR SINE MIR 18 120 -142 199 261 204 23 chr2 416217 416305 -250271549 + L2 LINE L2 3209 3312 -1 204 280 0 0 chr2 416415 416465 -250271389 + L2 LINE L2 3229 3278 -35 406 266 129 0 chr2 418012 418136 -250269718 - MIR SINE MIR -5 257 118 226 307 118 24 chr2 419404 419531 -250268323 - MIR3 SINE MIR -67 141 3 359 229 72 0 chr2 420424 420507 -250267347 + MER58B DNA MER1_type 237 325 -16 397 55 58 58 chr2 421990 422343 -250265511 + (TG)n Simple_repeat Simple_repeat 1 353 0 483 45 62 57 chr2 422419 422596 -250265258 + (TG)n Simple_repeat Simple_repeat 1 178 0 218 266 112 71 chr2 422981 423150 -250264704 + MIR SINE MIR 8 183 -79 710 307 82 46 chr2 425585 426378 -250261476 - L1MEc LINE L1 -3537 2678 1895 263 344 67 5 chr2 426413 426608 -250261246 - L1MEc LINE L1 -4596 1800 1594 181 43 0 0 chr2 429642 429665 -250258189 - MIR SINE MIR -117 145 123 233 220 20 0 chr2 431715 431765 -250256089 + L3 LINE CR1 1242 1292 -285 201 372 73 3 chr2 433289 433467 -250254387 + MIR SINE MIR 12 203 -59 8355 143 39 6 chr2 434475 434536 -250253318 + L1MA3 LINE L1 3622 3680 -2625 528 59 0 0 chr2 434536 434604 -250253250 + (GAA)n Simple_repeat Simple_repeat 2 69 0 8355 143 39 6 chr2 434604 437136 -250250718 + L1MA3 LINE L1 3680 6305 0 252 379 91 26 chr2 439057 439321 -250248533 - L2 LINE L2 -27 3245 2965 261 325 78 48 chr2 439619 439887 -250247967 - L2 LINE L2 -489 2825 2550 336 290 6 56 chr2 439922 440084 -250247770 - L1ME2 LINE L1 -9 6155 6002 * 621 333 47 15 chr2 440074 440162 -250247692 - L1M4 LINE L1 -2479 3667 3583 1682 184 42 0 chr2 440162 440450 -250247404 - AluJb SINE Alu -12 300 1 621 333 47 15 chr2 440450 440764 -250247090 - L1M4 LINE L1 -2563 3583 3252 * 2217 250 51 22 chr2 440746 441577 -250246277 - L1MC3 LINE L1 -749 5397 5170 699 284 59 6 chr2 441639 441977 -250245877 - L1MC3 LINE L1 -2661 3485 3130 620 144 68 7 chr2 441984 442130 -250245724 + L1MA7 LINE L1 6130 6284 -7 319 319 42 0 chr2 442135 442301 -250245553 + L1ME3A LINE L1 5107 5279 -867 693 302 99 29 chr2 442436 442993 -250244861 + L1ME3A LINE L1 5354 5949 -221 328 203 27 0 chr2 442994 443068 -250244786 + L1MA8 LINE L1 6209 6284 -7 2174 108 0 51 chr2 443109 443425 -250244429 - AluSg SINE Alu -10 300 1 373 303 128 0 chr2 444137 444325 -250243529 + MER58C DNA MER1_type 1 212 -3 379 314 78 31 chr2 444971 445264 -250242590 + L1MC/D LINE L1 5501 5807 -2001 209 233 0 0 chr2 448477 448520 -250239334 + (TA)n Simple_repeat Simple_repeat 1 43 0 242 280 86 0 chr2 449199 449292 -250238562 + MER3 DNA MER1_type 79 179 -30 232 337 53 63 chr2 450223 450413 -250237441 - MIR SINE MIR -50 212 25 184 146 24 49 chr2 450781 450822 -250237032 + MER5B DNA MER1_type 124 163 -15 228 69 92 11 chr2 451573 451660 -250236194 + (TG)n Simple_repeat Simple_repeat 2 95 0 2545 111 14 0 chr2 452537 452896 -250234958 + THE1B LTR MaLR 1 364 0 663 300 55 40 chr2 454626 455026 -250232828 + MLT2D LTR ERVL 9 414 0 1606 201 57 52 chr2 458352 458759 -250229095 + LTR2 LTR ERV1 41 449 0 225 0 0 0 chr2 462723 462748 -250225106 + (T)n Simple_repeat Simple_repeat 1 25 0 371 329 150 31 chr2 462848 463207 -250224647 - L1M4 LINE L1 -1097 5049 4648 684 287 59 53 chr2 463253 463374 -250224480 - L1M4 LINE L1 -1635 4511 4392 6207 58 17 18 chr2 463374 464155 -250223699 - LTR17 LTR ERV1 0 780 1 684 287 59 53 chr2 464155 464709 -250223145 - L1M4 LINE L1 -1754 4392 3832 531 276 104 21 chr2 464705 465089 -250222765 - L1M4 LINE L1 -3529 2617 2202 * 3251 110 69 6 chr2 465767 466248 -250221606 + MER9 LTR ERVK 1 511 0 185 371 0 0 chr2 467320 467382 -250220472 + L2 LINE L2 3005 3066 -206 23 0 0 0 chr2 469252 469275 -250218579 + AT_rich Low_complexity Low_complexity 1 23 0 972 124 0 0 chr2 470235 470364 -250217490 + AluSq/x SINE Alu 1 129 -183 416 296 85 0 chr2 472381 472570 -250215284 - MER92B LTR ERV1 -421 215 11 2773 141 20 50 chr2 472668 473229 -250214625 - Tigger3(Golem) DNA MER2_type -1 3028 2485 261 182 0 0 chr2 473330 473385 -250214469 + GA-rich Low_complexity Low_complexity 4 58 0 704 184 101 10 chr2 473475 473682 -250214172 - MER33 DNA MER1_type -48 276 51 2351 92 0 13 chr2 474192 474496 -250213358 + AluSx SINE Alu 1 300 -12 21 36 0 0 chr2 475850 475878 -250211976 + GC_rich Low_complexity Low_complexity 1 28 0 195 69 0 0 chr2 475904 475933 -250211921 + (CGGGG)n Simple_repeat Simple_repeat 5 33 0 409 247 54 75 chr2 479866 480052 -250207802 + MER58C DNA MER1_type 28 209 -6 591 129 0 0 chr2 480901 480986 -250206868 + AluSg/x SINE Alu 208 292 -18 303 288 55 43 chr2 481834 481997 -250205857 - L2 LINE L2 -491 2823 2659 288 295 98 16 chr2 482048 482292 -250205562 + L1M4 LINE L1 2994 3257 -2889 24 32 0 0 chr2 482357 482388 -250205466 + AT_rich Low_complexity Low_complexity 1 31 0 426 333 56 59 chr2 482545 482833 -250205021 + L1MEc LINE L1 2099 2385 -4011 439 253 120 71 chr2 483072 483440 -250204414 - L1 LINE L1 -3126 3020 2635 282 260 153 45 chr2 483605 483913 -250203941 + L1M4 LINE L1 3884 4224 -1922 460 346 93 12 chr2 483962 484219 -250203635 + L1M4 LINE L1 4483 4760 -1386 306 129 32 32 chr2 484473 484597 -250203257 + (TTAA)n Simple_repeat Simple_repeat 4 127 0 266 332 45 31 chr2 484751 485040 -250202814 + MER97c DNA MER1_type? 781 1073 -17 246 141 54 11 chr2 485217 485309 -250202545 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 350 137 99 19 chr2 485335 485496 -250202358 + (TAGA)n Simple_repeat Simple_repeat 2 175 0 195 119 34 34 chr2 485569 485628 -250202226 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 2054 156 6 22 chr2 488738 489059 -250198795 - MER1B DNA MER1_type -23 316 1 860 203 183 40 chr2 489059 489308 -250198546 - Tigger3(Golem) DNA MER2_type -2741 288 4 218 306 9 4 chr2 490453 490689 -250197165 + (CA)n Simple_repeat Simple_repeat 1 237 0 269 309 6 0 chr2 490741 490916 -250196938 + (CATA)n Simple_repeat Simple_repeat 2 177 0 434 263 6 0 chr2 490932 491092 -250196762 + (CA)n Simple_repeat Simple_repeat 2 162 0 307 250 14 0 chr2 492699 492771 -250195083 - MER69 DNA AcHobo 0 2526 2454 209 301 88 18 chr2 496509 496622 -250191232 - MIR SINE MIR -60 148 28 1378 139 8 36 chr2 496622 496874 -250190980 + AluJb SINE Alu 58 302 -10 340 270 63 8 chr2 497081 497207 -250190647 + MLT1I LTR MaLR 270 402 -7 864 206 73 5 chr2 501418 501636 -250186218 - L1MA5A LINE L1 -1 6296 6064 253 319 66 58 chr2 502277 502491 -250185363 - L1M4 LINE L1 -1548 4598 4387 2490 48 0 0 chr2 502491 502802 -250185052 + AluYa5 SINE Alu 1 311 0 253 319 66 58 chr2 502802 503039 -250184815 - L1M4 LINE L1 -1759 4387 4143 538 262 117 41 chr2 504425 504917 -250182937 - L1MDa LINE L1 -4511 2029 1543 745 283 125 69 chr2 505150 505758 -250182096 - L1MDa LINE L1 -5426 1104 463 197 305 84 21 chr2 505794 505889 -250181965 - MIR SINE MIR -91 171 71 2695 101 3 3 chr2 506200 506575 -250181279 + THE1C LTR MaLR 1 375 0 1567 234 39 8 chr2 507492 507856 -250179998 - MLT1B LTR MaLR -15 375 1 281 274 89 24 chr2 508033 508157 -250179697 + MIR SINE MIR 117 248 -14 1618 139 204 38 chr2 508355 508722 -250179132 + MSTA LTR MaLR 1 428 0 7593 171 40 67 chr2 508722 510417 -250177437 + THE1B-int LTR MaLR 1 1649 -2 1698 161 75 32 chr2 510425 510772 -250177082 + THE1B LTR MaLR 1 362 -2 198 0 0 0 chr2 511225 511247 -250176607 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 884 222 13 3 chr2 511679 511994 -250175860 - MSTD LTR MaLR 0 396 1 403 233 78 0 chr2 512519 512635 -250175219 + MLT1D LTR MaLR 381 505 0 1927 110 10 52 chr2 512759 513067 -250174787 + AluSg SINE Alu 1 295 -15 188 132 0 26 chr2 516398 516436 -250171418 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 432 285 75 5 chr2 516863 517063 -250170791 + MER20 DNA MER1_type 6 219 0 1832 143 62 20 chr2 517738 518095 -250169759 + THE1C LTR MaLR 1 372 -3 24 32 0 0 chr2 518976 519007 -250168847 + AT_rich Low_complexity Low_complexity 1 31 0 407 307 72 23 chr2 521147 521411 -250166443 - L1ME4a LINE L1 -295 5826 5550 241 272 48 0 chr2 521482 521607 -250166247 - L1ME4a LINE L1 -2350 5458 5328 235 200 36 0 chr2 521769 521824 -250166030 - LTR40b LTR ERVL -2 460 404 281 365 11 11 chr2 523573 523751 -250164103 + (CA)n Simple_repeat Simple_repeat 2 179 0 2206 92 0 7 chr2 523926 524229 -250163625 - AluSx SINE Alu -11 301 1 2718 208 69 60 chr2 525573 526328 -250161526 - L1MC1 LINE L1 -1 6332 5571 828 151 0 0 chr2 526328 526474 -250161380 + CT-rich Low_complexity Low_complexity 3 148 0 506 190 8 0 chr2 526968 527089 -250160765 + GA-rich Low_complexity Low_complexity 3 124 0 222 37 0 0 chr2 527688 527715 -250160139 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 430 301 47 21 chr2 528439 528828 -250159026 + L1MEc LINE L1 1371 1823 -753 737 240 179 28 chr2 529046 529371 -250158483 + MLT1B LTR MaLR 1 374 -16 205 162 0 101 chr2 529475 529574 -250158280 + A-rich Low_complexity Low_complexity 2 90 0 434 281 42 32 chr2 530066 530578 -250157276 - MLT1G1 LTR MaLR -2 593 2 187 246 33 0 chr2 531053 531114 -250156740 + L2 LINE L2 3028 3090 -223 228 193 53 0 chr2 531311 531368 -250156486 - MIR SINE MIR -79 183 124 555 273 88 10 chr2 531723 531917 -250155937 - L1PB4 LINE L1 -6 6150 5942 219 264 31 92 chr2 532446 532609 -250155245 - L2 LINE L2 -52 3261 3109 584 135 19 19 chr2 534355 534459 -250153395 + L1MA4 LINE L1 6197 6300 0 214 294 29 0 chr2 539172 539240 -250148614 + CT-rich Low_complexity Low_complexity 3 72 0 346 264 36 43 chr2 539453 539476 -250148378 - L1M4 LINE L1 -3619 2527 2505 2278 188 43 8 chr2 539476 539945 -250147909 - MER66B LTR ERV1 -1 485 1 346 264 36 43 chr2 539945 540061 -250147793 - L1M4 LINE L1 -3641 2505 2389 258 248 152 41 chr2 540108 540253 -250147601 - L1P LINE L1 -3839 2307 2147 44 20 0 0 chr2 540864 540915 -250146939 + AT_rich Low_complexity Low_complexity 1 51 0 717 224 108 108 chr2 540915 541163 -250146691 - L1MC5 LINE L1 -79 7882 7635 2175 128 0 0 chr2 541163 541459 -250146395 - AluSx SINE Alu -16 296 1 717 224 108 108 chr2 541459 541847 -250146007 - L1MC5 LINE L1 -325 7636 7246 26 50 0 0 chr2 542132 542172 -250145682 + AT_rich Low_complexity Low_complexity 1 40 0 1211 166 67 9 chr2 543025 543248 -250144606 + MER46A DNA MER2_type 1 236 0 1670 221 195 44 chr2 543536 544289 -250143565 - Charlie1a DNA MER1_type -34 1421 555 273 283 146 34 chr2 544385 544618 -250143236 - Charlie1a DNA MER1_type -1054 401 143 657 236 28 34 chr2 544674 544852 -250143002 - Charlie1a DNA MER1_type -1277 178 2 239 212 26 13 chr2 544883 544991 -250142863 - L1P LINE L1 -2364 3782 3672 308 268 132 64 chr2 545615 545880 -250141974 - L1MEc LINE L1 -3188 3376 3094 214 175 35 18 chr2 546469 546526 -250141328 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 361 296 103 57 chr2 546909 547277 -250140577 - L1MEc LINE L1 -4751 1994 1610 22 56 0 0 chr2 552715 552751 -250135103 + AT_rich Low_complexity Low_complexity 1 36 0 772 182 0 0 chr2 553847 553990 -250133864 + MER52A LTR ERV1 1613 1755 0 1818 164 125 3 chr2 554177 554536 -250133318 + MER57A LTR ERV1 1 403 0 3484 233 81 22 chr2 558138 559193 -250128661 - L1MC3 LINE L1 -166 7619 6503 2196 257 44 28 chr2 559181 559982 -250127872 - L1MCb LINE L1 -3034 3530 2717 * 1081 237 59 75 chr2 560008 560701 -250127153 - L1MCb LINE L1 -4849 1196 704 281 342 35 0 chr2 560758 560986 -250126868 + L1ME LINE L1 3340 3575 -2571 1198 94 0 0 chr2 560988 561148 -250126706 - L1PA7 LINE L1 -390 5764 5605 2959 60 5 21 chr2 561148 561546 -250126308 + L1PA7 LINE L1 5763 6158 0 896 282 119 31 chr2 561759 562642 -250125212 + L1ME LINE L1 3847 4807 -1339 589 190 0 0 chr2 562691 562812 -250125042 - L1PB1 LINE L1 -1588 4558 4438 * 5853 147 83 1 chr2 562808 563400 -250124454 + L1PB1 LINE L1 4553 5095 -1056 6075 71 84 14 chr2 563400 563474 -250124380 + L1PA8 LINE L1 5254 5321 -851 2343 92 0 38 chr2 563474 563611 -250124243 + AluSx SINE Alu 1 142 -170 3173 201 23 91 chr2 563611 564651 -250123203 - LTR5 LTR ERVK 0 969 1 2343 92 0 38 chr2 564651 564830 -250123024 + AluSx SINE Alu 142 305 -7 6075 71 84 14 chr2 564830 565610 -250122244 + L1PA8 LINE L1 5321 6168 -4 5853 147 83 1 chr2 565610 566471 -250121383 + L1PB1 LINE L1 5095 6143 -8 589 308 78 30 chr2 566834 567195 -250120659 + L1ME LINE L1 5276 5653 -509 242 285 85 8 chr2 567742 567872 -250119982 + L2 LINE L2 2154 2293 -1021 188 337 79 34 chr2 567985 568163 -250119691 + L2 LINE L2 3128 3313 0 1870 224 55 60 chr2 570247 570886 -250116968 - L1MB3 LINE L1 -14 6169 5534 303 286 7 82 chr2 571341 571488 -250116366 - L1M3 LINE L1 -586 5585 5450 1519 199 36 28 chr2 571593 571955 -250115899 + MLT1A1 LTR MaLR 1 365 0 298 333 27 0 chr2 572154 572265 -250115589 - L1MC5 LINE L1 -50 7911 7798 2264 261 72 42 chr2 572317 573392 -250114462 - L1M3 LINE L1 -2180 3966 2860 200 206 95 0 chr2 776065 776128 -249911726 - L2 LINE L2 -7 3306 3238 2565 37 0 0 chr2 776587 776885 -249910969 - AluY SINE Alu -13 298 1 300 203 40 0 chr2 776886 776960 -249910894 - MER69 DNA AcHobo -2370 156 80 27 0 0 0 chr2 777426 777453 -249910401 + AT_rich Low_complexity Low_complexity 1 27 0 663 168 19 0 chr2 777971 778078 -249909776 - FLAM_C SINE Alu -33 110 2 416 298 21 47 chr2 778726 778917 -249908937 + MER3 DNA MER1_type 24 209 0 335 323 168 0 chr2 778934 779089 -249908765 + MER5A DNA MER1_type 6 186 -3 212 306 72 39 chr2 780769 780949 -249906905 + L2 LINE L2 3083 3268 -4 204 289 0 19 chr2 780939 780991 -249906863 + MER5A DNA MER1_type 137 187 -2 * 1375 220 18 23 chr2 782165 782525 -249905329 - MLT1F LTR MaLR -81 461 15 477 335 24 0 chr2 782542 782706 -249905148 - MLT1F LTR MaLR -365 177 10 198 288 0 30 chr2 782801 782867 -249904987 - L2 LINE L2 -10 3262 3199 367 296 128 24 chr2 783101 783561 -249904293 - MLT1E LTR MaLR 0 593 13 948 149 0 0 chr2 783666 783807 -249904047 - FRAM SINE Alu -17 159 19 341 282 35 14 chr2 787236 787378 -249900476 + MIR3 SINE MIR 39 183 -25 311 174 149 8 chr2 787755 787876 -249899978 + L1M3 LINE L1 5707 5844 -339 398 318 26 75 chr2 788122 788209 -249899645 - L2 LINE L2 -61 3252 3162 2273 75 0 0 chr2 788209 788491 -249899363 - AluSp SINE Alu -23 290 9 398 318 26 75 chr2 788491 788752 -249899102 - L2 LINE L2 -151 3162 2921 2320 97 0 0 chr2 789001 789310 -249898544 - AluSx SINE Alu -3 309 1 2193 102 0 16 chr2 789489 789626 -249898228 + AluSx SINE Alu 1 139 -173 2112 98 0 29 chr2 789626 789933 -249897921 + AluSg SINE Alu 1 298 -12 2193 102 0 16 chr2 789933 790108 -249897746 + AluSx SINE Alu 139 308 -4 565 305 158 10 chr2 790115 790508 -249897346 - L2 LINE L2 -770 2544 2094 943 154 46 6 chr2 790954 791129 -249896725 - MER20 DNA MER1_type -1 218 37 939 223 79 48 chr2 791225 791580 -249896274 + MER69 DNA AcHobo 1919 2284 -242 2188 98 3 13 chr2 791587 791894 -249895960 + AluY SINE Alu 1 304 -7 313 91 0 106 chr2 791938 792004 -249895850 - L1MD1 LINE L1 0 6242 6184 3138 236 55 15 chr2 792011 792458 -249895396 - L1MD1 LINE L1 -86 6156 5728 1379 97 111 0 chr2 792458 792665 -249895189 - MER30 DNA MER1_type 0 230 1 3138 236 55 15 chr2 792665 792789 -249895065 - L1MD1 LINE L1 -514 5728 5610 2173 104 3 3 chr2 792789 793098 -249894756 - AluSc SINE Alu 0 309 1 3138 236 55 15 chr2 793098 793840 -249894014 - L1MD1 LINE L1 -632 5610 4789 2213 83 7 0 chr2 796029 796318 -249891536 - AluY SINE Alu -19 292 2 256 197 15 15 chr2 797356 797422 -249890432 + G-rich Low_complexity Low_complexity 2 67 0 337 349 54 12 chr2 798064 798230 -249889624 - L3 LINE CR1 -213 1364 1192 412 219 8 55 chr2 798361 798489 -249889365 + MLT1A2 LTR MaLR 19 140 -234 2264 103 0 3 chr2 798867 799178 -249888676 - AluSq SINE Alu -3 310 1 822 173 0 0 chr2 799970 800103 -249887751 + FLAM_C SINE Alu 1 133 0 1804 176 0 3 chr2 800787 800965 -249886889 - AluJo SINE Alu 0 312 134 2299 92 0 0 chr2 800965 801259 -249886595 - AluSq SINE Alu -19 294 1 1804 176 0 3 chr2 801259 801393 -249886461 - AluJo SINE Alu -178 134 1 382 277 54 81 chr2 802250 802510 -249885344 - HAL1 LINE L1 -953 1554 1302 381 248 0 0 chr2 803435 803548 -249884306 + (CA)n Simple_repeat Simple_repeat 1 113 0 189 0 0 0 chr2 803774 803795 -249884059 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 183 318 0 0 chr2 804534 804597 -249883257 - MIR SINE MIR -136 126 64 258 290 131 42 chr2 804636 804836 -249883018 + L1MC/D LINE L1 5600 5830 -1978 1797 155 17 3 chr2 804836 805132 -249882722 + AluJo SINE Alu 1 300 -12 258 290 131 42 chr2 805132 805190 -249882664 + L1MC/D LINE L1 5830 5881 -1927 301 283 5 81 chr2 805298 805496 -249882358 - L1MCa LINE L1 -4361 2065 1883 1314 224 50 42 chr2 805530 805888 -249881966 - MLT1A1 LTR MaLR -4 361 1 1291 131 143 20 chr2 806021 806273 -249881581 - AluJo SINE Alu -29 283 1 2318 100 0 0 chr2 806505 806814 -249881040 - AluSx SINE Alu -3 309 1 256 276 188 33 chr2 807209 807390 -249880464 - MIR SINE MIR -16 246 38 212 292 156 0 chr2 808605 808701 -249879153 - MIR SINE MIR -79 183 73 274 252 44 74 chr2 809239 809374 -249878480 - MIR SINE MIR -62 146 16 1089 0 0 0 chr2 810201 810322 -249877532 + (CA)n Simple_repeat Simple_repeat 1 121 0 183 42 0 0 chr2 810322 810346 -249877508 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 2393 208 60 19 chr2 811682 812102 -249875752 + MER6A DNA MER2_type -10 439 -426 2550 40 0 0 chr2 812102 812402 -249875452 + AluY SINE Alu 1 300 -11 2393 208 60 19 chr2 812402 812555 -249875299 + MER6A DNA MER2_type 439 584 -21 326 333 32 0 chr2 812696 812819 -249875035 - MIR SINE MIR -53 209 83 225 65 0 0 chr2 814309 814340 -249873514 + (TG)n Simple_repeat Simple_repeat 1 31 0 1501 205 59 38 chr2 815201 815733 -249872121 - LTR40a LTR ERVL 0 519 31 705 295 146 35 chr2 815887 816008 -249871846 + MLT1F LTR MaLR 1 107 -435 1893 180 40 30 chr2 816008 816436 -249871418 + MSTB1 LTR MaLR 1 432 0 705 295 146 35 chr2 816436 816802 -249871052 + MLT1F LTR MaLR 107 542 0 770 134 30 37 chr2 816803 816937 -249870917 + FLAM_A SINE Alu 1 133 0 1858 155 0 29 chr2 818478 818788 -249869066 + AluJb SINE Alu 1 301 -11 2267 172 46 0 chr2 819908 820321 -249867533 + MSTB1 LTR MaLR 1 432 0 1929 209 92 20 chr2 820394 820905 -249866949 - LTR10A LTR ERV1 -61 548 1 245 292 73 51 chr2 820936 821073 -249866781 + MIR SINE MIR 14 153 -109 1327 278 89 47 chr2 821644 822242 -249865612 - MLT1E2 LTR MaLR 0 626 4 374 219 42 25 chr2 822477 822596 -249865258 - L1MA4A LINE L1 -1 6302 6182 631 233 8 0 chr2 822632 822765 -249865089 + MER58 DNA MER1_type 116 249 -92 4079 96 28 7 chr2 822924 823487 -249864367 + L1PA11 LINE L1 5600 6174 0 716 249 79 0 chr2 823726 823903 -249863951 + MER3 DNA MER1_type 3 193 -16 1935 164 3 3 chr2 824493 824792 -249863062 + AluJo SINE Alu 1 299 -13 23 33 0 0 chr2 824902 824932 -249862922 + AT_rich Low_complexity Low_complexity 1 30 0 4155 73 15 0 chr2 825200 825745 -249862109 - L1PA10 LINE L1 0 6168 5616 1296 262 46 19 chr2 827196 827627 -249860227 - LTR47B LTR ERVL 0 443 1 659 208 82 76 chr2 828610 828927 -249858927 + MER5C DNA MER1_type 5 323 -1 2499 32 0 0 chr2 829211 829520 -249858334 - AluY SINE Alu 0 310 2 3911 198 51 1 chr2 830085 830449 -249857405 - L1MB8 LINE L1 0 6178 5833 1351 125 83 5 chr2 830449 830665 -249857189 + MER46A DNA MER2_type 2 234 -2 3911 198 51 1 chr2 830665 831110 -249856744 - L1MB8 LINE L1 -345 5833 5329 2654 58 52 14 chr2 831125 831487 -249856367 - L1PB1 LINE L1 -7 7563 7188 777 93 0 19 chr2 831503 831611 -249856243 - L1MA2 LINE L1 -9 6295 6190 10434 156 34 22 chr2 831613 831952 -249855902 - L1PB1 LINE L1 -502 7217 6884 1238 124 180 141 chr2 831952 832363 -249855491 - MSTA LTR MaLR -1 427 1 10434 156 34 22 chr2 832363 834468 -249853386 - L1PB1 LINE L1 -835 6884 4738 5101 193 47 6 chr2 835758 836974 -249850880 - L1PB1 LINE L1 -2826 4739 3462 210 71 0 0 chr2 836974 837002 -249850852 + (CCCCCT)n Simple_repeat Simple_repeat 3 30 0 324 303 66 9 chr2 837234 837445 -249850409 - L1MEd LINE L1 -5306 813 591 24 67 0 0 chr2 838742 838787 -249849067 + AT_rich Low_complexity Low_complexity 1 45 0 237 178 0 0 chr2 838880 838925 -249848929 + (TG)n Simple_repeat Simple_repeat 2 46 0 301 270 72 18 chr2 839166 839277 -249848577 + MIR SINE MIR 28 144 -118 460 296 35 7 chr2 839826 839968 -249847886 + Charlie8 DNA MER1_type 25 170 -2247 371 214 56 0 chr2 841598 841687 -249846167 + MIR SINE MIR 97 190 -72 416 54 36 0 chr2 842483 842539 -249845315 + L1P4 LINE L1 5423 5480 -685 2382 101 18 3 chr2 842549 842887 -249844967 - L1PA11 LINE L1 -2 6172 5830 3443 121 107 10 chr2 842887 843470 -249844384 - L1PA16 LINE L1 -67 6099 5460 3098 79 2 7 chr2 843469 843885 -249843969 + L1PA11 LINE L1 5467 5880 -294 * 286 270 149 29 chr2 843968 844142 -249843712 - L1ME LINE L1 -299 5822 5628 1528 142 130 15 chr2 844737 844998 -249842856 + AluJo SINE Alu 1 291 -21 299 280 0 30 chr2 845980 846080 -249841774 + L1ME LINE L1 5691 5787 -334 227 202 11 85 chr2 846130 846224 -249841630 + MIR SINE MIR 176 262 0 369 268 83 57 chr2 847288 847639 -249840215 - L1ME4a LINE L1 -21 6100 5741 270 295 54 0 chr2 847644 847756 -249840098 - L1ME4a LINE L1 -525 5596 5479 303 28 0 0 chr2 847930 847966 -249839888 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 590 263 205 16 chr2 848080 848392 -249839462 - L2 LINE L2 -9 3304 2934 274 265 0 0 chr2 848464 848532 -249839322 - L2 LINE L2 -681 2633 2566 661 276 167 13 chr2 848537 849077 -249838777 - L2 LINE L2 -1123 2191 1569 1205 162 31 13 chr2 849091 849319 -249838535 - L1MB7 LINE L1 -218 5966 5735 459 339 90 42 chr2 849576 850537 -249837317 + L2 LINE L2 2252 3272 0 4625 190 45 25 chr2 850688 851367 -249836487 - L1M1 LINE L1 -4065 1263 599 1920 156 0 32 chr2 851367 851675 -249836179 - AluJb SINE Alu -14 298 1 4625 190 45 25 chr2 851675 852379 -249835475 - L1M1 LINE L1 -4729 599 727 1448 132 32 0 chr2 852379 852599 -249835255 + MER30 DNA MER1_type 3 229 -1 4625 190 45 25 chr2 852599 852908 -249834946 - L1M1 LINE L1 -4600 728 426 577 292 85 30 chr2 852899 853135 -249834719 - L1M4b LINE L1 -6296 563 315 * 845 197 82 52 chr2 853158 853391 -249834463 - L1M4b LINE L1 -6610 249 10 294 313 17 17 chr2 853669 853784 -249834070 + L2 LINE L2 3188 3302 -11 189 277 43 0 chr2 853792 853839 -249834015 - L2 LINE L2 -87 3185 3137 2158 85 0 11 chr2 853850 854131 -249833723 + AluSq SINE Alu 36 313 0 22 56 0 0 chr2 854926 854962 -249832892 + AT_rich Low_complexity Low_complexity 1 36 0 380 279 72 86 chr2 855284 855728 -249832126 - L2 LINE L2 -5 3308 2871 468 51 0 0 chr2 857722 857781 -249830073 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2173 112 3 0 chr2 857781 858077 -249829777 - AluSx SINE Alu -15 297 1 2232 99 7 3 chr2 858081 858375 -249829479 - AluSx SINE Alu -17 295 1 1262 244 141 74 chr2 858726 858861 -249828993 - Charlie7 DNA MER1_type -1751 861 736 698 47 0 0 chr2 858861 858970 -249828884 - L1PA4 LINE L1 0 6155 6059 1262 244 141 74 chr2 858970 859134 -249828720 - Charlie7 DNA MER1_type -1876 736 584 5585 118 8 4 chr2 859134 860396 -249827458 - L1PA15 LINE L1 -2 6163 4868 1262 244 141 74 chr2 860396 860902 -249826952 - Charlie7 DNA MER1_type -2028 584 1 213 43 0 65 chr2 863687 863733 -249824121 + (TCCCG)n Simple_repeat Simple_repeat 2 44 0 724 264 120 15 chr2 865151 865477 -249822377 + MLT1B LTR MaLR 1 360 -30 279 262 90 25 chr2 865576 865698 -249822156 + MIR SINE MIR 14 143 -119 916 126 14 0 chr2 866385 866528 -249821326 - HSMAR2 DNA Mariner -419 883 739 2080 103 32 7 chr2 866558 866840 -249821014 - AluSg SINE Alu -4 306 18 4144 117 30 15 chr2 866849 867508 -249820346 + HSMAR2 DNA Mariner 633 1301 -1 404 235 12 29 chr2 867515 867685 -249820169 + (CATATA)n Simple_repeat Simple_repeat 2 168 0 188 256 12 0 chr2 867770 867856 -249819998 + (CATA)n Simple_repeat Simple_repeat 2 88 0 242 191 43 17 chr2 867874 867989 -249819865 + (CATA)n Simple_repeat Simple_repeat 3 120 0 217 228 0 63 chr2 868147 868305 -249819549 + (CATA)n Simple_repeat Simple_repeat 4 151 0 215 264 13 119 chr2 871384 871543 -249816311 - MIR3 SINE MIR -55 153 12 2308 120 0 16 chr2 871885 872202 -249815652 + AluSq SINE Alu 2 313 0 13125 202 48 53 chr2 872962 874948 -249812906 + L1MA9 LINE L1 1 1996 -4380 1980 171 89 30 chr2 874948 875352 -249812502 - MSTC LTR MaLR 0 428 1 13125 202 48 53 chr2 875352 875462 -249812392 + L1MA9 LINE L1 1996 2105 -4271 892 163 106 0 chr2 875462 875622 -249812232 - AluJo/FRAM SINE Alu -3 309 133 2318 95 27 0 chr2 875625 875920 -249811934 - AluSg SINE Alu -7 303 1 13125 202 48 53 chr2 875920 877891 -249809963 + L1MA9 LINE L1 2107 3789 -2587 2390 89 0 0 chr2 877891 878183 -249809671 + AluSx SINE Alu 1 292 -20 13125 202 48 53 chr2 878183 880054 -249807800 + L1MA9 LINE L1 3789 5668 -708 21 82 0 0 chr2 880630 880679 -249807175 + AT_rich Low_complexity Low_complexity 1 49 0 1408 192 25 0 chr2 880685 880971 -249806883 + L1MA9 LINE L1 5657 5949 -427 9767 39 1 183 chr2 881001 882715 -249805139 + SVA Other Other 2 1386 0 1274 247 51 0 chr2 882716 883108 -249804746 - HAL1 LINE L1 -800 1707 1296 304 296 15 67 chr2 883460 883595 -249804259 + L1ME LINE L1 5728 5855 -266 1603 123 36 36 chr2 883599 883852 -249804002 + AluSx SINE Alu 60 312 0 252 305 24 98 chr2 883902 884066 -249803788 - MIR SINE MIR -1 261 110 193 262 164 0 chr2 884111 884172 -249803682 - MIR SINE MIR -65 197 127 219 293 7 30 chr2 885641 885929 -249801925 + C-rich Low_complexity Low_complexity 1 281 0 307 129 86 0 chr2 886015 886085 -249801769 + MER45A DNA AcHobo 81 156 -22 29 0 0 0 chr2 886305 886334 -249801520 + AT_rich Low_complexity Low_complexity 1 29 0 221 246 0 31 chr2 886363 886428 -249801426 + MIR SINE MIR 81 143 -119 326 294 39 0 chr2 886554 886656 -249801198 - MIR3 SINE MIR -7 201 96 2161 125 6 10 chr2 887609 887921 -249799933 + AluSx SINE Alu 1 311 -1 211 204 0 56 chr2 887961 888015 -249799839 + GA-rich Low_complexity Low_complexity 6 56 0 285 273 39 0 chr2 888175 888252 -249799602 - L2 LINE L2 -2 3311 3232 242 0 61 0 chr2 888277 888310 -249799544 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 543 305 121 18 chr2 888576 888973 -249798881 - L2 LINE L2 -613 2701 2264 1852 159 27 3 chr2 889638 889933 -249797921 + AluJb SINE Alu 8 309 -3 343 182 71 50 chr2 890314 890413 -249797441 - L1MC5 LINE L1 -30 7931 7831 1623 163 4 4 chr2 890694 890952 -249796902 - AluJb SINE Alu -54 258 1 2357 95 0 0 chr2 890967 891271 -249796583 - AluY SINE Alu -7 304 1 223 315 194 6 chr2 891560 891725 -249796129 + MIR SINE MIR 55 250 -12 268 319 43 49 chr2 892028 892191 -249795663 - MIR3 SINE MIR -41 167 6 268 147 0 147 chr2 892937 892989 -249794865 + MER45A DNA AcHobo 71 110 -1471 2287 113 0 0 chr2 892989 893322 -249794532 + AluSq SINE Alu 1 313 0 268 147 0 147 chr2 893322 893344 -249794510 + MER45A DNA AcHobo 110 134 -44 2125 125 7 7 chr2 894588 894892 -249792962 + AluSx SINE Alu 1 304 -8 569 165 75 75 chr2 896689 896901 -249790953 - MER69 DNA AcHobo -3 2523 2312 3778 255 30 34 chr2 896925 897860 -249789994 + L1M4 LINE L1 3371 4308 -1838 2228 128 0 0 chr2 897860 898166 -249789688 + AluSx SINE Alu 1 306 -6 3778 255 30 34 chr2 898166 898382 -249789472 + L1M4 LINE L1 4308 4519 -1627 1907 153 27 10 chr2 898382 898683 -249789171 + AluJb SINE Alu 3 308 -4 3778 255 30 34 chr2 898683 898885 -249788969 + L1M4 LINE L1 4519 4720 -1426 3897 71 4 21 chr2 898929 899489 -249788365 + SVA Other Other 2 551 -835 634 146 73 0 chr2 899939 900049 -249787805 - LTR12 LTR ERV1 -234 480 363 559 149 0 141 chr2 900049 900197 -249787657 - pTR5 LTR ERV1 -570 1528 55 266 211 0 0 chr2 900201 900253 -249787601 - LTR30 LTR ERV1 -670 52 1 2313 94 3 3 chr2 900296 900594 -249787260 - AluY SINE Alu -13 298 1 683 232 26 0 chr2 901844 901999 -249785855 - L1M4 LINE L1 -2229 3917 3759 1478 235 57 2 chr2 902019 902474 -249785380 - L1M4 LINE L1 -2545 3601 3122 426 182 65 0 chr2 902796 902873 -249784981 + THE1B LTR MaLR 1 82 -282 2078 114 9 24 chr2 902879 903211 -249784643 + THE1B LTR MaLR 38 364 0 735 259 45 53 chr2 903220 903463 -249784391 - MIR SINE MIR -17 245 5 276 335 180 0 chr2 903524 903685 -249784169 + MIR SINE MIR 58 247 -15 518 302 124 24 chr2 904345 905137 -249782717 - L2 LINE L2 0 3272 2325 195 125 0 0 chr2 905169 905209 -249782645 + (TG)n Simple_repeat Simple_repeat 1 40 0 355 324 45 73 chr2 905226 905476 -249782378 - MIR SINE MIR -17 245 4 196 268 110 39 chr2 908943 909070 -249778784 + MIR SINE MIR 51 186 -76 195 278 130 19 chr2 910128 910236 -249777618 + MIR SINE MIR 16 135 -127 1564 196 43 3 chr2 910565 911146 -249776708 - MER67B LTR ERV1 -1 660 10 814 181 0 0 chr2 911374 911507 -249776347 + FLAM_C SINE Alu 1 133 0 3109 109 17 11 chr2 911622 912090 -249775764 - LTR3b LTR ERVK -29 471 1 21 36 0 0 chr2 913627 913655 -249774199 + AT_rich Low_complexity Low_complexity 1 28 0 1670 199 28 25 chr2 914694 915051 -249772803 - MLT1A1 LTR MaLR -7 358 1 31 26 0 0 chr2 916432 916470 -249771384 + AT_rich Low_complexity Low_complexity 1 38 0 1847 55 13 0 chr2 916470 916706 -249771148 - L1PA4 LINE L1 0 6155 5917 240 175 0 0 chr2 917933 917973 -249769881 - MER67B LTR ERV1 -621 40 1 266 196 228 22 chr2 918306 918398 -249769456 - L2 LINE L2 -19 3253 3143 207 379 48 0 chr2 918826 918929 -249768925 + MIR SINE MIR 81 188 -74 31 0 0 0 chr2 919267 919298 -249768556 + AT_rich Low_complexity Low_complexity 1 31 0 261 0 0 0 chr2 919748 919777 -249768077 + (A)n Simple_repeat Simple_repeat 1 29 0 4387 118 57 50 chr2 920464 921241 -249766613 + LTR1 LTR ERV1 1 782 -3 748 262 96 17 chr2 921324 921668 -249766186 - L1ME4a LINE L1 -251 5870 5500 1016 109 0 7 chr2 922672 922810 -249765044 + LTR1 LTR ERV1 648 784 -1 224 219 0 0 chr2 922893 922934 -249764920 + (CA)n Simple_repeat Simple_repeat 1 41 0 316 222 152 30 chr2 923439 923538 -249764316 - L2 LINE L2 0 3313 3203 516 294 123 11 chr2 923746 923933 -249763921 + MIR SINE MIR 55 262 0 3036 242 18 5 chr2 924231 924990 -249762864 + L1 LINE L1 2258 3026 -3120 1572 61 0 5 chr2 924991 925189 -249762665 + AluSq SINE Alu 1 197 -116 200 288 88 25 chr2 925257 925417 -249762437 - L2 LINE L2 -2007 1307 1138 213 39 0 0 chr2 926187 926213 -249761641 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1811 137 4 0 chr2 926219 926490 -249761364 - AluSq SINE Alu -41 272 1 994 158 11 16 chr2 926948 927131 -249760723 - AluJo SINE Alu -44 268 87 201 254 15 75 chr2 927805 927872 -249759982 - L2 LINE L2 -24 3289 3227 438 337 151 12 chr2 928912 929256 -249758598 - L2 LINE L2 -1 3312 2921 369 300 139 43 chr2 929317 929937 -249757917 - L2 LINE L2 -508 2806 2128 193 383 0 12 chr2 929964 930045 -249757809 + L2 LINE L2 3108 3187 -85 794 329 88 61 chr2 931541 932361 -249755493 - HAL1 LINE L1 -726 1781 940 322 327 64 0 chr2 932686 932842 -249755012 + MER5A DNA MER1_type 1 166 -23 250 303 0 11 chr2 936266 936444 -249751410 + (TG)n Simple_repeat Simple_repeat 1 176 0 309 333 20 0 chr2 936459 936558 -249751296 + (CATG)n Simple_repeat Simple_repeat 4 104 0 282 211 0 0 chr2 936561 936618 -249751236 + MER4-int LTR ERV1 1111 1167 -5431 302 264 73 0 chr2 936618 936728 -249751126 + (CATG)n Simple_repeat Simple_repeat 1 118 0 374 232 17 22 chr2 936732 936913 -249750941 + (TATG)n Simple_repeat Simple_repeat 1 180 0 308 287 0 11 chr2 936935 937116 -249750738 + (TATG)n Simple_repeat Simple_repeat 2 180 0 267 260 0 0 chr2 937205 937301 -249750553 + (TG)n Simple_repeat Simple_repeat 1 96 0 444 369 56 13 chr2 937649 937882 -249749972 + L2 LINE L2 997 1239 -2075 360 250 20 66 chr2 937882 938034 -249749820 - L1 LINE L1 -2342 3804 3660 1097 303 85 5 chr2 939393 939815 -249748039 + HsTC2 DNA Tc2 1 456 -1442 258 296 107 45 chr2 939836 940079 -249747775 - MLT1H LTR MaLR -20 529 272 246 200 100 93 chr2 940081 940221 -249747633 - MLT1H LTR MaLR -408 141 1 231 114 0 0 chr2 940230 940265 -249747589 + HsTC2 DNA Tc2 463 497 -1401 938 264 25 16 chr2 940365 940683 -249747171 + HsTC2 DNA Tc2 1573 1893 -5 4643 47 2 0 chr2 941503 942059 -249745795 + L1PA8 LINE L1 5612 6168 -4 216 97 0 0 chr2 942577 942608 -249745246 + (TG)n Simple_repeat Simple_repeat 1 31 0 2083 151 87 25 chr2 943584 943987 -249743867 - MSTA LTR MaLR 0 428 1 843 109 8 8 chr2 945770 945889 -249741965 + THE1B LTR MaLR 246 364 0 1062 201 99 48 chr2 945925 946239 -249741615 + L1MC4 LINE L1 7543 7872 -170 239 206 88 0 chr2 946248 946316 -249741538 + L1MC4 LINE L1 7835 7908 -134 185 231 0 0 chr2 946435 946474 -249741380 - L2 LINE L2 -1 3271 3233 576 240 35 85 chr2 946835 947093 -249740761 - L2 LINE L2 -5 3308 3064 393 102 0 0 chr2 947478 947537 -249740317 + (CA)n Simple_repeat Simple_repeat 1 59 0 1076 210 262 0 chr2 948061 948389 -249739465 + MER47B DNA MER2_type 1 414 -4 1979 146 0 0 chr2 949774 950076 -249737778 - AluSx SINE Alu -10 302 1 384 311 43 25 chr2 950850 951011 -249736843 + L2 LINE L2 3103 3266 -6 230 250 48 39 chr2 952664 952768 -249735086 - MER103 DNA DNA -39 127 23 29 60 0 0 chr2 954491 954541 -249733313 + AT_rich Low_complexity Low_complexity 1 50 0 180 196 98 20 chr2 954707 954758 -249733096 + L3 LINE CR1 1355 1409 -168 407 314 65 40 chr2 955474 955722 -249732132 - MLT1L LTR MaLR 0 615 362 2036 120 10 3 chr2 955966 956267 -249731587 - AluSq SINE Alu -10 303 1 333 281 105 91 chr2 956317 957230 -249730624 - L1M2 LINE L1 -5584 1265 340 552 334 116 59 chr2 957271 958730 -249729124 + L2 LINE L2 1472 3272 0 336 299 133 33 chr2 959080 959291 -249728563 + MLT1I LTR MaLR 37 268 -141 218 337 174 0 chr2 962615 962701 -249725153 + L2 LINE L2 3158 3258 -14 1475 185 16 33 chr2 962825 963128 -249724726 + AluJo SINE Alu 4 301 -11 502 290 36 36 chr2 963202 963395 -249724459 - L1MB3 LINE L1 -9 6174 5982 2252 87 0 3 chr2 963723 964023 -249723831 - AluY SINE Alu -12 299 1 192 135 0 0 chr2 964460 964497 -249723357 + (GGGAGA)n Simple_repeat Simple_repeat 4 40 0 230 256 24 32 chr2 965234 965359 -249722495 + L1MC4a LINE L1 5305 5428 -2380 22 80 0 0 chr2 965653 965703 -249722151 + AT_rich Low_complexity Low_complexity 1 50 0 201 121 0 0 chr2 965713 965746 -249722108 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 29 47 0 0 chr2 965801 965844 -249722010 + AT_rich Low_complexity Low_complexity 1 43 0 424 265 34 34 chr2 965853 966057 -249721797 + L1MC4a LINE L1 5729 5932 -1876 228 313 0 0 chr2 967323 967387 -249720467 + MIR SINE MIR 42 105 -103 304 244 105 27 chr2 967853 968007 -249719847 + MIR SINE MIR 88 262 0 405 155 10 19 chr2 969344 969447 -249718407 + CT-rich Low_complexity Low_complexity 3 104 0 1318 133 133 48 chr2 969447 969717 -249718137 - AluSx SINE Alu -19 293 1 2392 68 3 7 chr2 971392 971688 -249716166 + AluY SINE Alu 1 295 -16 22 35 0 0 chr2 973082 973111 -249714743 + AT_rich Low_complexity Low_complexity 1 29 0 2218 152 44 29 chr2 974459 974913 -249712941 - Charlie1a DNA MER1_type -356 1099 639 43795 35 21 1 chr2 974930 980960 -249706894 - L1PA3 LINE L1 0 6155 1 2203 244 41 14 chr2 980963 981550 -249706304 - Charlie1a DNA MER1_type -804 651 49 353 282 29 0 chr2 981550 981653 -249706201 - Charlie1a DNA MER1_type -1343 112 7 1114 219 11 6 chr2 983034 983332 -249704522 - MLT1A2 LTR MaLR -16 358 16 185 303 32 58 chr2 984623 984778 -249703076 + L2 LINE L2 3161 3311 -2 1145 165 176 24 chr2 986444 986699 -249701155 - AluJo SINE Alu -8 294 1 2195 110 0 20 chr2 987109 987410 -249700444 - AluSg SINE Alu -15 295 1 3070 236 91 30 chr2 988129 988961 -249698893 - L1ME1 LINE L1 0 6961 6182 1940 113 0 0 chr2 988961 989217 -249698637 - AluSc SINE Alu -17 292 37 3070 236 91 30 chr2 989217 990182 -249697672 - L1ME1 LINE L1 -779 6182 5050 21670 112 12 8 chr2 990189 993603 -249694251 - L1PA8A LINE L1 -12 6770 3371 261 0 0 0 chr2 993603 993632 -249694222 + (TA)n Simple_repeat Simple_repeat 1 29 0 2103 121 13 3 chr2 993632 993930 -249693924 - AluSg SINE Alu -9 301 1 21670 112 12 8 chr2 993930 994651 -249693203 - L1PA8A LINE L1 -3410 3372 2627 2100 172 31 21 chr2 994648 995208 -249692646 - L1PA8A LINE L1 -4559 2228 1668 * 5973 98 28 18 chr2 995201 996057 -249691797 - L1PA8A LINE L1 -5008 1203 339 1988 96 55 9 chr2 996112 996495 -249691359 - LTR7 LTR ERV1 0 450 1 3623 113 20 16 chr2 996495 997050 -249690804 - HERVH LTR ERV1 0 7713 7157 1659 122 16 0 chr2 997042 997296 -249690558 - HERVH LTR ERV1 -1696 6017 5760 * 5033 121 2 2 chr2 997292 998021 -249689833 - HERVH LTR ERV1 -3001 4712 3995 18715 143 9 27 chr2 998034 1001513 -249686341 - HERVH LTR ERV1 -3979 3734 1 2074 105 31 8 chr2 1001513 1001904 -249685950 - LTR7 LTR ERV1 0 450 1 1296 227 84 27 chr2 1001904 1002310 -249685544 - L1ME1 LINE L1 -1928 5013 4585 431 119 15 0 chr2 1002309 1002376 -249685478 - L1MD3 LINE L1 -1188 6807 6740 * 1751 192 48 0 chr2 1002404 1002758 -249685096 - L1MB7 LINE L1 -26 6158 5788 * 3321 229 54 25 chr2 1002755 1003336 -249684518 - L1ME1 LINE L1 -2569 4372 3809 2246 122 48 14 chr2 1003336 1003688 -249684166 + THE1B LTR MaLR 1 364 0 3321 229 54 25 chr2 1003688 1004211 -249683643 - L1ME1 LINE L1 -3132 3809 3236 322 234 35 21 chr2 1004196 1004341 -249683513 - L1ME1 LINE L1 -4617 2324 2178 * 445 282 20 63 chr2 1004363 1004436 -249683418 - L1ME1 LINE L1 -4888 1535 1460 854 256 42 0 chr2 1004436 1004651 -249683203 - MER58A DNA MER1_type 0 224 1 445 282 20 63 chr2 1004651 1004829 -249683025 - L1ME1 LINE L1 -4963 1460 1295 870 245 50 0 chr2 1004829 1005029 -249682825 - MER58A DNA MER1_type 0 224 15 1383 218 116 9 chr2 1005029 1005460 -249682394 - L1ME1 LINE L1 -5140 1283 807 855 307 115 23 chr2 1005497 1006054 -249681800 - L1ME1 LINE L1 -5755 668 61 257 167 17 50 chr2 1007082 1007142 -249680712 - MIR SINE MIR -121 141 84 514 111 0 20 chr2 1007441 1007540 -249680314 + (TCCC)n Simple_repeat Simple_repeat 2 98 0 1707 218 9 14 chr2 1011814 1012162 -249675692 - MER7A DNA MER2_type 0 346 3 215 360 9 9 chr2 1012288 1012399 -249675455 + MIR SINE MIR 34 144 -64 295 286 181 29 chr2 1013157 1013328 -249674526 - L3 LINE CR1 -319 1258 1062 2073 200 30 30 chr2 1013423 1013923 -249673931 - MLT1D LTR MaLR -2 503 4 2146 162 21 72 chr2 1014564 1015034 -249672820 - L1MC1 LINE L1 0 6333 5888 282 298 96 40 chr2 1015425 1015623 -249672231 - MIR SINE MIR -23 239 31 21 0 0 0 chr2 1016277 1016298 -249671556 + AT_rich Low_complexity Low_complexity 1 21 0 1913 167 0 0 chr2 1016314 1016607 -249671247 - AluJo SINE Alu -19 293 1 2288 190 36 73 chr2 1016647 1017144 -249670710 + L1MD3 LINE L1 7419 7892 -103 2490 57 0 0 chr2 1017144 1017440 -249670414 + AluY SINE Alu 1 296 -15 2288 190 36 73 chr2 1017440 1017531 -249670323 + L1MD3 LINE L1 7892 7985 -10 489 309 68 4 chr2 1017825 1018077 -249669777 - L2 LINE L2 -1332 1982 1715 337 154 0 0 chr2 1018254 1018306 -249669548 - MER20 DNA MER1_type 0 219 168 862 271 298 16 chr2 1018313 1019015 -249668839 - L2 LINE L2 -1696 1618 1115 279 0 0 0 chr2 1019015 1019046 -249668808 + (GA)n Simple_repeat Simple_repeat 2 32 0 862 271 298 16 chr2 1019046 1019319 -249668535 - L2 LINE L2 -2199 1115 368 313 261 11 23 chr2 1019330 1019418 -249668436 + L1ME LINE L1 5582 5668 -453 29 28 0 0 chr2 1019557 1019593 -249668261 + AT_rich Low_complexity Low_complexity 1 36 0 456 287 223 16 chr2 1021490 1021737 -249666117 + Tigger8 DNA MER2_type 29 326 -340 190 106 43 0 chr2 1021939 1021986 -249665868 + (TTATA)n Simple_repeat Simple_repeat 5 53 0 429 263 227 10 chr2 1022116 1022314 -249665540 - L2 LINE L2 0 3272 3032 181 252 133 22 chr2 1022498 1022633 -249665221 - MIR SINE MIR -52 210 61 441 249 64 77 chr2 1023168 1023503 -249664351 - MLT1J2 LTR MaLR -3 416 89 240 223 277 0 chr2 1025715 1025827 -249662027 + MIR SINE MIR 112 254 -8 327 388 25 0 chr2 1026366 1026487 -249661367 + MIR SINE MIR 22 145 -63 346 286 54 65 chr2 1026495 1026680 -249661174 - MIR3 SINE MIR -6 202 20 445 220 17 12 chr2 1026680 1026853 -249661001 + CT-rich Low_complexity Low_complexity 3 176 0 917 154 149 0 chr2 1026855 1027030 -249660824 - AluJo SINE Alu -25 287 87 21 0 0 0 chr2 1027171 1027192 -249660662 + AT_rich Low_complexity Low_complexity 1 21 0 2502 101 121 16 chr2 1028232 1028619 -249659235 + MSTA LTR MaLR 1 428 0 384 22 0 0 chr2 1028699 1028744 -249659110 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 80 0 0 chr2 1030440 1030490 -249657364 + AT_rich Low_complexity Low_complexity 1 50 0 195 343 0 30 chr2 1030739 1030806 -249657048 - L2 LINE L2 -71 3201 3137 577 253 90 50 chr2 1030938 1031436 -249656418 + L1MEc LINE L1 784 1301 -5095 299 304 164 29 chr2 1031592 1031872 -249655982 - L2 LINE L2 -1682 1632 1315 4226 95 20 4 chr2 1031943 1032488 -249655366 - MER41A LTR ERV1 0 554 1 657 196 40 20 chr2 1033761 1033909 -249653945 - L1M4c LINE L1 -4860 1786 1636 * 3779 226 15 33 chr2 1033897 1034779 -249653075 - L1M4c LINE L1 -5662 880 15 322 236 0 14 chr2 1035092 1035164 -249652690 + MER94 DNA DNA 1 71 -63 227 265 0 0 chr2 1035179 1035228 -249652626 + GA-rich Low_complexity Low_complexity 2 50 0 2078 127 7 0 chr2 1035296 1035596 -249652258 - AluSx SINE Alu -10 302 1 21 0 0 0 chr2 1035804 1035825 -249652029 + AT_rich Low_complexity Low_complexity 1 21 0 1883 223 79 28 chr2 1035874 1036483 -249651371 + MER114 LTR ERV 1 640 -8 649 264 137 42 chr2 1037483 1037986 -249649868 - L1MEc LINE L1 -5812 584 34 4797 88 45 37 chr2 1039461 1040142 -249647712 - LTR12 LTR ERV1 -1 687 1 2857 80 14 8 chr2 1040369 1040731 -249647123 - THE1B LTR MaLR 0 364 1 527 297 36 10 chr2 1041220 1041412 -249646442 + MER63A DNA MER1_type 14 210 0 189 195 0 0 chr2 1042226 1042267 -249645587 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 338 253 11 22 chr2 1042268 1042339 -249645515 + L1MC4 LINE L1 6613 6684 -1358 243 0 0 0 chr2 1042339 1042366 -249645488 + (TC)n Simple_repeat Simple_repeat 2 28 0 338 253 11 22 chr2 1042366 1042385 -249645469 + L1MC4 LINE L1 6684 6702 -1340 356 215 9 0 chr2 1042485 1042592 -249645262 + (TA)n Simple_repeat Simple_repeat 2 109 0 243 0 0 0 chr2 1042597 1042624 -249645230 + (TC)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr2 1042623 1042643 -249645211 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 225 0 0 0 chr2 1042642 1042667 -249645187 + (CA)n Simple_repeat Simple_repeat 2 26 0 320 229 9 0 chr2 1042749 1042858 -249644996 + (TA)n Simple_repeat Simple_repeat 2 111 0 252 170 0 0 chr2 1042928 1042981 -249644873 + (TA)n Simple_repeat Simple_repeat 2 54 0 2492 166 29 45 chr2 1042983 1043451 -249644403 - MLT2B3 LTR ERVL -35 510 58 1762 166 11 65 chr2 1043453 1043809 -249644045 + MER1B DNA MER1_type 1 337 -2 542 31 0 0 chr2 1043810 1043874 -249643980 - MLT2B3 LTR ERVL -490 64 1 498 276 56 23 chr2 1044479 1044693 -249643161 - Zaphod DNA AcHobo 0 4031 3811 1919 175 55 134 chr2 1044696 1045514 -249642340 - Zaphod DNA AcHobo -2756 1275 523 234 268 71 0 chr2 1045617 1045729 -249642125 - Zaphod DNA AcHobo -3719 312 193 320 276 126 0 chr2 1047015 1047142 -249640712 + MIR3 SINE MIR 4 146 -62 2679 191 85 77 chr2 1047236 1047955 -249639899 + LTR8A LTR ERV1 1 725 -2 1799 266 19 8 chr2 1048089 1048571 -249639283 - MER41E LTR ERV1 -5 507 21 1916 171 24 0 chr2 1048966 1049306 -249638548 - MER57A LTR ERV1 -48 355 8 2024 108 4 14 chr2 1050033 1050310 -249637544 + AluSp SINE Alu 1 274 -39 3788 183 57 1 chr2 1051190 1051895 -249635959 + Tigger2 DNA MER2_type 1 744 -1974 1616 127 20 0 chr2 1051962 1052214 -249635640 + Tigger2 DNA MER2_type 2462 2718 0 3495 118 19 6 chr2 1052273 1052789 -249635065 - MER1A DNA MER1_type -6 523 1 245 285 244 16 chr2 1052817 1053010 -249634844 + MIR SINE MIR 21 257 -5 626 202 0 9 chr2 1053163 1053277 -249634577 + L2 LINE L2 3197 3309 -4 25 51 0 0 chr2 1055631 1055670 -249632184 + AT_rich Low_complexity Low_complexity 1 39 0 497 234 109 85 chr2 1055987 1056254 -249631600 - L1ME1 LINE L1 -18 6148 5875 1340 250 76 7 chr2 1056377 1056813 -249631041 - MLT1C LTR MaLR -1 466 1 192 211 0 0 chr2 1057248 1057286 -249630568 + L3 LINE CR1 1514 1551 -26 270 300 118 18 chr2 1058071 1058181 -249629673 - L2 LINE L2 0 3313 3193 1437 37 0 0 chr2 1058191 1058352 -249629502 - L1PA3 LINE L1 -3 6152 5992 825 41 0 0 chr2 1058352 1058450 -249629404 + L1PA3 LINE L1 5899 5996 -159 1904 155 0 19 chr2 1058599 1058908 -249628946 - AluJo SINE Alu -9 303 1 383 178 82 0 chr2 1059194 1059267 -249628587 + MER3 DNA MER1_type 115 193 -16 212 193 36 133 chr2 1059444 1059527 -249628327 + L2 LINE L2 3117 3191 -81 247 326 74 0 chr2 1059588 1059683 -249628171 - L2 LINE L2 -22 3250 3149 620 318 108 43 chr2 1059807 1060464 -249627390 - L2 LINE L2 -338 2976 2277 259 182 0 18 chr2 1060500 1060555 -249627299 + Ricksha DNA DNA 815 868 -1178 2207 163 52 12 chr2 1060558 1060795 -249627059 - MLT1C LTR MaLR -27 440 179 2412 94 0 0 chr2 1060795 1061104 -249626750 - AluSg SINE Alu -1 309 1 2207 163 52 12 chr2 1061104 1061271 -249626583 - MLT1C LTR MaLR -288 179 20 694 234 119 22 chr2 1061288 1061514 -249626340 + MLT1A1 LTR MaLR 11 258 -107 865 173 12 19 chr2 1061525 1061687 -249626167 + MLT1A1 LTR MaLR 205 365 0 268 276 120 26 chr2 1061707 1061899 -249625955 - L2 LINE L2 -1087 2227 2018 1699 215 27 87 chr2 1063078 1063190 -249624664 - MLT2B3 LTR ERVL -2 552 435 3568 81 25 2 chr2 1063190 1063633 -249624221 + MLT2A2 LTR ERVL 1 453 0 1699 215 27 87 chr2 1063633 1064106 -249623748 - MLT2B3 LTR ERVL -119 435 2 1266 152 156 56 chr2 1064433 1064607 -249623247 + AluJo SINE Alu 1 213 -99 2212 152 48 28 chr2 1064607 1064962 -249622892 - THE1B LTR MaLR 0 364 3 1266 152 156 56 chr2 1064962 1065057 -249622797 + AluJo SINE Alu 213 297 -15 241 143 36 18 chr2 1065834 1065890 -249621964 - L1MC4 LINE L1 -1343 6699 6643 268 329 48 14 chr2 1066656 1066802 -249621052 + L2 LINE L2 2885 3035 -237 21 0 0 0 chr2 1066909 1066930 -249620924 + AT_rich Low_complexity Low_complexity 1 21 0 9607 116 17 6 chr2 1067866 1070245 -249617609 - L1PA11 LINE L1 -2 6172 3780 2384 106 0 73 chr2 1070245 1070643 -249617211 - L1PB1 LINE L1 0 6151 5783 7040 123 13 3 chr2 1070643 1071920 -249615934 - L1MA2 LINE L1 -26 6278 4992 6549 126 2 25 chr2 1071918 1073325 -249614529 - L1PB1 LINE L1 -3 7586 6212 * 1503 249 37 0 chr2 1073321 1073758 -249614096 - L1 LINE L1 -2794 4790 4338 * 10232 125 54 9 chr2 1073892 1076190 -249611664 - L1PBa LINE L1 -3714 3148 599 1309 131 10 0 chr2 1076164 1076362 -249611492 - L1PBa LINE L1 -6663 200 1 * 14662 205 23 28 chr2 1076373 1080531 -249607323 - L1PB1 LINE L1 -2361 5223 2 514 258 50 33 chr2 1081922 1082104 -249605750 - L1MC4 LINE L1 -1373 6669 6485 275 70 0 0 chr2 1083465 1083508 -249604346 + Alu SINE Alu 260 302 0 254 69 52 69 chr2 1083641 1083699 -249604155 + MLT1B LTR MaLR 1 57 -333 186 304 120 0 chr2 1084131 1084223 -249603631 - MIR SINE MIR -71 191 89 228 292 0 0 chr2 1085841 1085906 -249601948 + (CAATT)n Simple_repeat Simple_repeat 3 67 0 185 250 0 18 chr2 1087136 1087192 -249600662 + L2 LINE L2 3194 3248 -24 283 175 18 0 chr2 1087192 1087249 -249600605 - MLT1I LTR MaLR 0 409 352 769 276 44 4 chr2 1087296 1087521 -249600333 - MLT1I LTR MaLR -175 234 1 2086 74 0 0 chr2 1087894 1088164 -249599690 + AluY SINE Alu 39 308 -3 463 279 109 80 chr2 1089357 1089724 -249598130 + MLT1H1 LTR MaLR 100 484 -71 2181 108 0 7 chr2 1089724 1090030 -249597824 + AluSx SINE Alu 1 304 -8 463 279 109 80 chr2 1090030 1090102 -249597752 + MLT1H1 LTR MaLR 484 552 -3 867 87 17 29 chr2 1090873 1091046 -249596808 + (TTCCC)n Simple_repeat Simple_repeat 3 173 0 484 328 22 11 chr2 1091884 1092067 -249595787 - MIR SINE MIR -8 254 70 2489 110 17 80 chr2 1092095 1092212 -249595642 - L1MA4A LINE L1 -11 6292 6169 2380 64 0 10 chr2 1092212 1092525 -249595329 - AluY SINE Alu -1 310 1 2489 110 17 80 chr2 1092525 1092872 -249594982 - L1MA4A LINE L1 -134 6169 5857 608 162 0 51 chr2 1093079 1093122 -249594732 + L1MA3 LINE L1 6195 6239 -66 2439 120 28 11 chr2 1093122 1093480 -249594374 + THE1B LTR MaLR 1 364 0 608 162 0 51 chr2 1093480 1093553 -249594301 + L1MA3 LINE L1 6239 6305 0 265 320 22 10 chr2 1094666 1094800 -249593054 + MIR SINE MIR 85 218 -44 241 232 85 73 chr2 1094903 1094985 -249592869 + MIR SINE MIR 87 169 -93 1841 108 7 32 chr2 1095506 1095784 -249592070 + AluSx SINE Alu 3 273 -39 2319 81 0 0 chr2 1097202 1097511 -249590343 + AluY SINE Alu 1 309 -2 2054 100 19 19 chr2 1097800 1098111 -249589743 + AluSq SINE Alu 3 313 0 803 185 43 19 chr2 1098913 1099124 -249588730 + Charlie5 DNA MER1_type 2366 2581 -31 335 279 14 0 chr2 1099192 1099339 -249588515 + CT-rich Low_complexity Low_complexity 4 152 0 2725 83 11 0 chr2 1099578 1099929 -249587925 - THE1A LTR MaLR 0 355 1 12102 93 2 1 chr2 1099929 1101506 -249586348 - THE1A-int LTR MaLR 0 1580 1 2486 104 17 20 chr2 1101506 1101862 -249585992 - THE1A LTR MaLR 0 355 1 346 307 122 55 chr2 1101930 1102168 -249585686 - L2 LINE L2 0 3272 3019 249 327 36 27 chr2 1103207 1103317 -249584537 + L2 LINE L2 3157 3267 -5 2327 103 0 0 chr2 1103382 1103694 -249584160 - AluSx SINE Alu 0 312 1 204 276 105 0 chr2 1107041 1107117 -249580737 + MIR SINE MIR 138 221 -41 248 292 123 39 chr2 1107571 1107701 -249580153 + MIR3 SINE MIR 34 174 -34 227 261 203 0 chr2 1108355 1108424 -249579430 - MIR SINE MIR -63 145 63 197 304 36 0 chr2 1108917 1108973 -249578881 + L2 LINE L2 3248 3305 -8 372 311 0 19 chr2 1108973 1109079 -249578775 + MIR SINE MIR 42 145 -63 25 51 0 0 chr2 1109170 1109209 -249578645 + AT_rich Low_complexity Low_complexity 1 39 0 432 214 119 8 chr2 1109731 1109857 -249577997 + MIR SINE MIR 113 252 -10 220 273 15 15 chr2 1110005 1110071 -249577783 + L2 LINE L2 3202 3267 -5 2202 98 0 0 chr2 1110216 1110522 -249577332 - AluSc SINE Alu -3 306 1 381 258 25 58 chr2 1110551 1110671 -249577183 + L2 LINE L2 3134 3249 -23 329 207 224 35 chr2 1110913 1111029 -249576825 - L2 LINE L2 -15 3298 3161 395 288 85 30 chr2 1112287 1112523 -249575331 + HERV16 LTR ERVL 1241 1489 -3507 379 230 11 0 chr2 1112969 1113056 -249574798 - MER53 DNA DNA -2 187 100 269 146 104 0 chr2 1114388 1114436 -249573418 + Charlie3 DNA MER1_type 2645 2697 -13 295 178 14 14 chr2 1114490 1114563 -249573291 + GA-rich Low_complexity Low_complexity 4 76 0 982 264 162 57 chr2 1114777 1115033 -249572821 - HAL1 LINE L1 -1352 1155 927 1915 141 7 0 chr2 1115033 1115332 -249572522 - AluSx SINE Alu -11 301 1 982 264 162 57 chr2 1115332 1115743 -249572111 - HAL1 LINE L1 -1580 927 418 285 232 0 0 chr2 1115806 1115875 -249571979 + CT-rich Low_complexity Low_complexity 5 73 0 3629 121 19 4 chr2 1115926 1116440 -249571414 - MER1A DNA MER1_type -5 524 3 277 303 37 28 chr2 1116684 1116793 -249571061 - L1MC4 LINE L1 -140 7902 7793 1513 203 128 30 chr2 1116808 1117246 -249570608 - MLT1D LTR MaLR -4 501 21 1782 152 18 0 chr2 1117384 1117661 -249570193 + AluJb SINE Alu 13 294 -18 412 214 128 0 chr2 1117671 1117788 -249570066 - L1MC4 LINE L1 -386 7656 7525 1954 135 44 0 chr2 1118298 1118595 -249569259 - AluSx SINE Alu -2 310 1 245 240 13 13 chr2 1118669 1118744 -249569110 + (TA)n Simple_repeat Simple_repeat 2 76 0 1913 144 0 21 chr2 1119370 1119661 -249568193 - AluJo SINE Alu -10 302 18 282 116 0 0 chr2 1119883 1119926 -249567928 + (GGGGA)n Simple_repeat Simple_repeat 4 46 0 2140 98 55 33 chr2 1119976 1120343 -249567511 + THE1C LTR MaLR 1 375 0 208 328 25 34 chr2 1121011 1121130 -249566724 - MIR SINE MIR -121 141 24 244 325 51 8 chr2 1121672 1121789 -249566065 - MIR SINE MIR -90 172 51 591 134 47 20 chr2 1122894 1123246 -249564608 + (TG)n Simple_repeat Simple_repeat 1 361 0 499 180 28 17 chr2 1123261 1123439 -249564415 + (TG)n Simple_repeat Simple_repeat 1 180 0 666 124 47 9 chr2 1123472 1123811 -249564043 + (TG)n Simple_repeat Simple_repeat 1 352 0 410 117 32 11 chr2 1124086 1124180 -249563674 + (TG)n Simple_repeat Simple_repeat 1 96 0 872 196 119 35 chr2 1124189 1124507 -249563347 + MSTC LTR MaLR 42 421 -7 1102 240 50 89 chr2 1124714 1125273 -249562581 - MER89 LTR ERV1 -22 537 1 180 0 0 0 chr2 1125889 1125909 -249561945 + (TC)n Simple_repeat Simple_repeat 2 21 0 3774 157 21 97 chr2 1126845 1127056 -249560798 - MER54B LTR ERVL 0 793 568 1625 184 0 27 chr2 1127056 1127350 -249560504 - AluJb SINE Alu -26 286 1 3774 157 21 97 chr2 1127350 1127996 -249559858 - MER54B LTR ERVL -225 568 1 304 346 59 0 chr2 1130645 1130781 -249557073 - MIR SINE MIR -18 244 101 1775 194 22 27 chr2 1130853 1131220 -249556634 + MLT1A1 LTR MaLR 1 365 0 204 125 0 0 chr2 1131439 1131471 -249556383 + (CTG)n Simple_repeat Simple_repeat 2 33 0 243 216 39 0 chr2 1131586 1131637 -249556217 + CT-rich Low_complexity Low_complexity 3 55 0 257 287 151 6 chr2 1132448 1132571 -249555283 - MIR SINE MIR -61 147 30 259 279 67 39 chr2 1132650 1132754 -249555100 + MIR SINE MIR 48 154 -108 227 266 16 0 chr2 1134270 1134334 -249553520 - L2 LINE L2 -5 3267 3203 306 281 58 8 chr2 1134373 1134494 -249553360 + L1MEd LINE L1 54 180 -5939 552 231 140 52 chr2 1134814 1135122 -249552732 + L1MC4 LINE L1 7708 8042 0 655 331 84 22 chr2 1135125 1135493 -249552361 + L1MEd LINE L1 404 794 -5325 303 305 121 11 chr2 1136237 1136509 -249551345 + L1M4 LINE L1 3626 3927 -2219 531 269 87 107 chr2 1136657 1137264 -249550590 - MLT1G1 LTR MaLR 0 595 1 185 333 0 15 chr2 1137663 1137729 -249550125 - MIR SINE MIR -150 112 48 738 462 14 41 chr2 1138619 1138693 -249549161 + MER44D DNA MER2_type 1 76 -2415 180 0 0 0 chr2 1138693 1138713 -249549141 + (GA)n Simple_repeat Simple_repeat 1 20 0 738 462 14 41 chr2 1138713 1138928 -249548926 + MER44D DNA MER2_type 76 552 -57 241 248 173 51 chr2 1139014 1139228 -249548626 - L1MEc LINE L1 -1163 5052 4813 617 297 110 64 chr2 1139553 1140904 -249546950 - L1MEc LINE L1 -1672 4543 3255 2504 98 0 35 chr2 1140904 1140944 -249546910 - THE1B LTR MaLR 0 364 324 2252 95 6 38 chr2 1140944 1141260 -249546594 + AluY SINE Alu 1 306 -5 2504 98 0 35 chr2 1141260 1141596 -249546258 - THE1B LTR MaLR -40 324 1 10460 108 33 34 chr2 1141596 1143178 -249544676 - THE1B-int LTR MaLR 0 1580 1 2611 123 0 3 chr2 1143178 1143543 -249544311 - THE1B LTR MaLR 0 364 1 617 297 110 64 chr2 1143543 1143978 -249543876 - L1MEc LINE L1 -2959 3256 2673 4084 237 79 18 chr2 1144108 1145521 -249542333 - L1MC/D LINE L1 -743 5821 4424 592 183 46 8 chr2 1145565 1145696 -249542158 - L1 LINE L1 -1862 4284 4149 * 5910 126 28 22 chr2 1145694 1146921 -249540933 - L1P4 LINE L1 -587 5581 4364 3534 274 24 24 chr2 1146943 1148106 -249539748 - L1MC/D LINE L1 -4878 1167 5 965 222 4 12 chr2 1148120 1148372 -249539482 - L1MEc LINE L1 -3951 2445 2196 1559 93 0 0 chr2 1148407 1148600 -249539254 + AluSg1 SINE Alu 9 201 -108 227 148 37 0 chr2 1148700 1148754 -249539100 + C-rich Low_complexity Low_complexity 2 57 0 228 111 0 0 chr2 1149144 1149180 -249538674 + (T)n Simple_repeat Simple_repeat 1 36 0 22298 154 25 41 chr2 1150212 1151137 -249536717 - L1PB1 LINE L1 -1 6465 5527 2872 93 0 3 chr2 1151137 1151513 -249536341 - THE1C LTR MaLR 0 375 1 22298 154 25 41 chr2 1151513 1152306 -249535548 - L1PB1 LINE L1 -939 5527 4723 1841 126 18 22 chr2 1152306 1152584 -249535270 - AluSx SINE Alu 0 312 36 22298 154 25 41 chr2 1152584 1152646 -249535208 - L1PB1 LINE L1 -1743 4723 4662 6544 71 0 2 chr2 1152646 1154310 -249533544 - L1PA8A LINE L1 -3 6128 4477 5737 38 0 18 chr2 1154315 1155020 -249532834 - L1PA4 LINE L1 0 6155 5464 22298 154 25 41 chr2 1155020 1156212 -249531642 - L1PB1 LINE L1 -1808 4658 3448 234 0 0 0 chr2 1156212 1156238 -249531616 + (TA)n Simple_repeat Simple_repeat 2 27 0 22298 154 25 41 chr2 1156238 1159755 -249528099 - L1PB1 LINE L1 -3018 3448 1 4541 206 16 2 chr2 1159765 1160699 -249527155 - L1 LINE L1 -1773 4373 3427 336 270 138 7 chr2 1161958 1162110 -249525744 - MIR SINE MIR -79 183 12 215 342 63 54 chr2 1164525 1164747 -249523107 - L2 LINE L2 -125 3147 2924 3580 75 25 2 chr2 1166027 1166507 -249521347 + L1PA8 LINE L1 5682 6172 0 483 247 121 6 chr2 1167177 1167359 -249520495 + MIR SINE MIR 59 261 -1 281 250 218 16 chr2 1168141 1168393 -249519461 - L1ME4a LINE L1 -4 6117 5815 23 0 0 0 chr2 1168424 1168447 -249519407 + AT_rich Low_complexity Low_complexity 1 23 0 409 269 154 29 chr2 1168703 1168878 -249518976 - Charlie8 DNA MER1_type -2195 222 26 237 363 50 16 chr2 1169286 1169468 -249518386 - MIR SINE MIR -73 189 2 316 275 128 0 chr2 1170597 1170706 -249517148 - L2 LINE L2 -3 3310 3188 2367 92 7 3 chr2 1171045 1171348 -249516506 - AluSx SINE Alu -8 304 1 230 206 118 0 chr2 1173125 1173193 -249514661 - MIR3 SINE MIR -21 187 112 21 36 0 0 chr2 1173731 1173759 -249514095 + AT_rich Low_complexity Low_complexity 1 28 0 195 136 0 58 chr2 1173969 1174072 -249513782 + (TA)n Simple_repeat Simple_repeat 1 97 0 186 133 0 0 chr2 1174724 1174754 -249513100 + (T)n Simple_repeat Simple_repeat 1 30 0 187 221 0 88 chr2 1175902 1175970 -249511884 + MIR SINE MIR 109 170 -92 315 62 0 42 chr2 1177132 1177180 -249510674 + Alu SINE Alu 250 295 -6 1349 280 48 26 chr2 1177180 1177862 -249509992 - L1MEc LINE L1 -4222 2174 1478 1913 142 79 17 chr2 1178883 1179236 -249508618 + THE1C LTR MaLR 1 375 0 386 267 62 67 chr2 1180137 1180347 -249507507 - MLT1K LTR MaLR 0 588 380 256 250 0 112 chr2 1180373 1180489 -249507365 - L2 LINE L2 -18 3295 3193 1782 196 88 60 chr2 1180875 1181374 -249506480 - MLT2B1 LTR ERVL -3 517 5 330 317 81 16 chr2 1181375 1181561 -249506293 - MIR SINE MIR -25 237 40 201 250 26 13 chr2 1182822 1182898 -249504956 + CT-rich Low_complexity Low_complexity 3 79 0 215 237 278 18 chr2 1184013 1184182 -249503672 - MIR SINE MIR -20 242 30 299 310 8 0 chr2 1184825 1184954 -249502900 + (TG)n Simple_repeat Simple_repeat 2 131 0 423 322 0 0 chr2 1184973 1185153 -249502701 + (TG)n Simple_repeat Simple_repeat 1 180 0 2282 266 70 14 chr2 1185734 1186685 -249501169 - Charlie2 DNA MER1_type 0 2862 1858 464 284 64 36 chr2 1186705 1186955 -249500899 - Charlie2 DNA MER1_type -2560 302 46 497 287 18 24 chr2 1186962 1187129 -249500725 - MER5B DNA MER1_type -12 166 1 204 276 83 70 chr2 1188000 1188156 -249499698 + L2 LINE L2 3155 3312 -1 3064 196 16 13 chr2 1188574 1189208 -249498646 - L1MA4 LINE L1 -6 6294 5659 2019 144 42 31 chr2 1190334 1190694 -249497160 + THE1B LTR MaLR 1 364 0 392 215 0 0 chr2 1190867 1190960 -249496894 - L1MB8 LINE L1 -2 6176 6084 2130 222 45 8 chr2 1190972 1191463 -249496391 - L1MB4 LINE L1 -13 6167 5659 248 222 34 26 chr2 1191997 1192114 -249495740 + (TA)n Simple_repeat Simple_repeat 2 119 0 243 175 48 16 chr2 1192830 1192893 -249494961 + MIR SINE MIR 104 168 -94 306 290 128 39 chr2 1193634 1193975 -249493879 - L2 LINE L2 -183 3130 2705 183 311 123 0 chr2 1194004 1194110 -249493744 - L2 LINE L2 -703 2611 2493 809 263 10 0 chr2 1194160 1194354 -249493500 - MLT1A1 LTR MaLR 0 365 170 788 167 29 64 chr2 1194458 1194662 -249493192 - MLT1A1 LTR MaLR -176 198 2 1617 199 178 20 chr2 1196011 1196056 -249491798 - MLT2B2 LTR ERVL 0 515 478 240 35 0 0 chr2 1196056 1196085 -249491769 + (CA)n Simple_repeat Simple_repeat 2 30 0 1617 199 178 20 chr2 1196085 1196482 -249491372 - MLT2B2 LTR ERVL -37 478 3 2365 127 25 0 chr2 1196627 1196982 -249490872 - THE1B LTR MaLR 0 364 1 3893 75 26 0 chr2 1196982 1197478 -249490376 - THE1B-int LTR MaLR 0 1580 1072 4401 164 33 33 chr2 1197479 1198466 -249489388 - MER11C LTR ERVK 0 1071 1 6923 116 19 40 chr2 1198466 1199550 -249488304 - THE1B-int LTR MaLR -519 1061 1 2319 130 28 3 chr2 1199550 1199904 -249487950 - THE1B LTR MaLR 0 364 2 275 317 49 21 chr2 1199946 1200088 -249487766 - MIR3 SINE MIR -60 148 3 2095 118 180 114 chr2 1200382 1200950 -249486904 + LTR18B LTR ERVL 1 605 -9 267 317 50 17 chr2 1201039 1201159 -249486695 + MIR SINE MIR 22 145 -117 1642 183 49 24 chr2 1201616 1201944 -249485910 - MLT1A1 LTR MaLR -4 361 26 216 0 0 0 chr2 1203270 1203294 -249484560 + (T)n Simple_repeat Simple_repeat 1 24 0 219 336 37 15 chr2 1204052 1204186 -249483668 + MIR SINE MIR 16 152 -56 2529 116 3 0 chr2 1205592 1205946 -249481908 + THE1A LTR MaLR 1 355 0 1358 147 0 9 chr2 1207253 1207464 -249480390 - AluJb SINE Alu -20 292 84 326 253 110 24 chr2 1207662 1207806 -249480048 - MER5B DNA MER1_type -24 165 2 200 339 77 15 chr2 1208336 1208466 -249479388 - MIR3 SINE MIR -6 202 65 2228 148 36 17 chr2 1208620 1208977 -249478877 + THE1B LTR MaLR 1 364 0 182 193 35 70 chr2 1209451 1209508 -249478346 - MIR3 SINE MIR -54 154 100 1111 124 34 51 chr2 1209606 1209785 -249478069 - L1MA8 LINE L1 -10 6281 6104 2188 113 3 0 chr2 1209785 1210088 -249477766 + AluSx SINE Alu 1 304 0 1111 124 34 51 chr2 1210088 1210141 -249477713 - L1MA8 LINE L1 -187 6104 6052 307 286 0 0 chr2 1210183 1210260 -249477594 + MIR SINE MIR 173 249 -13 472 306 40 5 chr2 1210349 1210548 -249477306 - MIR SINE MIR -7 255 50 237 204 0 0 chr2 1211191 1211240 -249476614 - L3 LINE CR1 -180 1397 1349 21 0 0 0 chr2 1211582 1211603 -249476251 + AT_rich Low_complexity Low_complexity 1 21 0 255 232 29 14 chr2 1211703 1211772 -249476082 - MLT1I LTR MaLR -30 379 310 264 356 29 19 chr2 1211990 1212198 -249475656 - L1M4 LINE L1 -1333 4813 4604 4637 205 19 12 chr2 1212234 1213432 -249474422 - L1PA16 LINE L1 -722 5444 4232 4068 137 63 1 chr2 1213432 1214097 -249473757 + L1PA16 LINE L1 5452 6157 -9 39 0 0 0 chr2 1214507 1214546 -249473308 + AT_rich Low_complexity Low_complexity 1 39 0 273 183 0 0 chr2 1214802 1214862 -249472992 + (TA)n Simple_repeat Simple_repeat 2 61 0 467 322 91 10 chr2 1215093 1215487 -249472367 - HAL1 LINE L1 -855 1652 1227 468 286 36 96 chr2 1215509 1215925 -249471929 - L1MEd LINE L1 -5034 1085 695 217 358 37 19 chr2 1216629 1216791 -249471063 - L3 LINE CR1 -606 971 807 3598 137 18 0 chr2 1216957 1217469 -249470385 + MER1A DNA MER1_type 1 521 -8 276 331 108 7 chr2 1217623 1217771 -249470083 + MIR SINE MIR 49 211 -51 744 212 38 11 chr2 1218410 1218594 -249469260 + MER5A DNA MER1_type 1 189 0 215 205 0 0 chr2 1219412 1219451 -249468403 + GA-rich Low_complexity Low_complexity 1 39 0 211 317 98 55 chr2 1220879 1221043 -249466811 - MIR3 SINE MIR -32 176 6 242 222 14 28 chr2 1221741 1221813 -249466041 + CT-rich Low_complexity Low_complexity 2 72 0 203 200 0 40 chr2 1222432 1222482 -249465372 + C-rich Low_complexity Low_complexity 5 52 0 1123 293 43 5 chr2 1223044 1223484 -249464370 + MLT1C LTR MaLR 1 457 -10 2848 85 0 0 chr2 1223645 1224009 -249463845 + THE1B LTR MaLR 1 364 0 192 302 128 20 chr2 1224645 1224794 -249463060 + MIR3 SINE MIR 33 197 -11 236 221 143 0 chr2 1225262 1225339 -249462515 - MER5A DNA MER1_type -80 109 22 219 233 0 0 chr2 1227062 1227105 -249460749 + (CAT)n Simple_repeat Simple_repeat 3 45 0 227 255 0 0 chr2 1229314 1229365 -249458489 + PABL_B LTR ERV1 1 51 -616 272 336 96 64 chr2 1229403 1229715 -249458139 + PABL_A LTR ERV1 25 346 -314 820 229 36 32 chr2 1229886 1230139 -249457715 + PABL_B LTR ERV1 414 667 0 230 254 17 0 chr2 1230836 1230895 -249456959 + L3 LINE CR1 1515 1574 -3 771 170 7 22 chr2 1231612 1231747 -249456107 + FLAM_C SINE Alu 1 133 0 377 306 23 12 chr2 1231827 1232000 -249455854 - HAL1 LINE L1 -89 2418 2244 811 287 120 40 chr2 1232237 1233043 -249454811 - HAL1 LINE L1 -604 1903 1033 1319 119 39 153 chr2 1233047 1233407 -249454447 - L1MA4A LINE L1 0 6303 5985 900 216 42 0 chr2 1233670 1233860 -249453994 - MER58A DNA MER1_type -3 221 24 241 305 51 0 chr2 1233980 1234098 -249453756 - HAL1 LINE L1 -1777 730 607 277 344 2 11 chr2 1234207 1234318 -249453536 + MER5A DNA MER1_type 67 172 -6 226 277 161 15 chr2 1234879 1235016 -249452838 + MER110 LTR ERV1 307 463 -28 240 200 0 0 chr2 1236568 1236618 -249451236 + (TG)n Simple_repeat Simple_repeat 1 50 0 3268 84 34 2 chr2 1236876 1237314 -249450540 + MLT2A2 LTR ERVL 2 453 0 43778 78 13 4 chr2 1237314 1242918 -249444936 + HERVL-A2 LTR ERVL 1 5654 0 3094 97 26 29 chr2 1242918 1243329 -249444525 + MLT2A2 LTR ERVL 1 411 -42 198 0 0 0 chr2 1243329 1243351 -249444503 + (TA)n Simple_repeat Simple_repeat 2 23 0 375 23 0 0 chr2 1243357 1243401 -249444453 + (TC)n Simple_repeat Simple_repeat 1 44 0 3094 97 26 29 chr2 1243401 1243436 -249444418 + MLT2A2 LTR ERVL 416 453 0 1271 160 106 57 chr2 1243834 1244116 -249443738 - AluJo SINE Alu -16 296 1 489 279 132 11 chr2 1244623 1244813 -249443041 + MIR SINE MIR 50 262 0 1500 204 56 66 chr2 1245604 1245997 -249441857 + MLT1B LTR MaLR 1 389 -1 328 248 95 19 chr2 1246019 1246124 -249441730 - L1ME3A LINE L1 -223 5947 5835 1578 90 0 0 chr2 1248027 1248238 -249439616 - L1PA8 LINE L1 0 6172 5962 1841 122 38 94 chr2 1248972 1249027 -249438827 + THE1C LTR MaLR 1 58 -317 2373 94 7 0 chr2 1249027 1249335 -249438519 + AluSx SINE Alu 1 310 -2 1841 122 38 94 chr2 1249335 1249674 -249438180 + THE1C LTR MaLR 58 373 -2 299 132 0 19 chr2 1250195 1250248 -249437606 + THE1C LTR MaLR 124 175 -200 202 178 56 33 chr2 1250984 1251074 -249436780 + (TA)n Simple_repeat Simple_repeat 1 92 0 26 30 0 0 chr2 1251158 1251191 -249436663 + AT_rich Low_complexity Low_complexity 1 33 0 1124 110 12 18 chr2 1252198 1252361 -249435493 - AluJ SINE Alu -11 301 140 333 132 19 0 chr2 1252645 1252698 -249435156 + MSTA LTR MaLR 1 54 -374 239 185 0 37 chr2 1252714 1252768 -249435086 - AluJ SINE Alu -169 133 82 298 270 13 19 chr2 1252966 1253125 -249434729 + (TA)n Simple_repeat Simple_repeat 2 159 0 189 74 0 0 chr2 1253125 1253152 -249434702 + (GA)n Simple_repeat Simple_repeat 2 28 0 1771 126 0 39 chr2 1254122 1254332 -249433522 + Charlie3 DNA MER1_type 1 218 -2494 2735 93 11 13 chr2 1254332 1254708 -249433146 - THE1C LTR MaLR 0 375 1 1771 126 0 39 chr2 1254708 1254892 -249432962 + Charlie3 DNA MER1_type 218 2712 0 1399 204 37 74 chr2 1255309 1255712 -249432142 - MLT1B LTR MaLR -2 388 1 439 248 7 7 chr2 1255859 1256008 -249431846 + CT-rich Low_complexity Low_complexity 4 152 0 309 294 164 36 chr2 1256221 1256659 -249431195 + L1ME4a LINE L1 5448 5941 -180 200 83 0 28 chr2 1259047 1259083 -249428771 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 19646 55 1 1 chr2 1259083 1262289 -249425565 - L1PA5 LINE L1 -24 6130 2926 207 236 83 14 chr2 1263764 1263836 -249424018 + MIR SINE MIR 48 124 -138 288 250 14 19 chr2 1263844 1263998 -249423856 - MLT1J1 LTR MaLR -11 500 237 354 321 37 21 chr2 1264154 1264341 -249423513 - MLT1J2 LTR MaLR -254 196 7 208 356 22 0 chr2 1264350 1264440 -249423414 + MIR SINE MIR 166 257 -5 21 0 0 0 chr2 1264663 1264684 -249423170 + AT_rich Low_complexity Low_complexity 1 21 0 185 238 0 0 chr2 1264839 1264881 -249422973 + MIR SINE MIR 203 244 -18 1564 229 31 3 chr2 1266159 1266512 -249421342 - MLT1A1 LTR MaLR 0 365 3 2278 70 47 3 chr2 1266665 1266963 -249420891 + AluSq SINE Alu 1 311 -2 192 40 0 0 chr2 1267215 1267240 -249420614 + (CA)n Simple_repeat Simple_repeat 1 25 0 521 266 49 21 chr2 1267289 1267432 -249420422 - MIR SINE MIR -112 150 4 280 312 14 7 chr2 1267810 1267951 -249419903 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 258 273 65 79 chr2 1269768 1269907 -249417947 + MIR SINE MIR 8 144 -118 5809 143 5 4 chr2 1271475 1272395 -249415459 - L1MA5 LINE L1 0 6300 5380 339 65 0 0 chr2 1273001 1273047 -249414807 + (TG)n Simple_repeat Simple_repeat 2 47 0 269 362 7 33 chr2 1274949 1275101 -249412753 - MIR SINE MIR -113 149 2 292 335 58 29 chr2 1275197 1275370 -249412484 + MIR SINE MIR 4 181 -81 809 119 0 84 chr2 1278026 1278169 -249409685 - L1PB4 LINE L1 -1 6155 6025 1295 193 89 50 chr2 1279067 1279404 -249408450 + MLT1B LTR MaLR 4 353 -37 374 271 25 8 chr2 1279681 1279799 -249408055 - L1ME3 LINE L1 -135 6027 5908 1925 251 75 56 chr2 1279805 1279993 -249407861 - L1MEc LINE L1 -3609 2606 2423 2205 114 7 0 chr2 1279993 1280291 -249407563 - AluSx SINE Alu -12 300 1 1925 251 75 56 chr2 1280291 1281459 -249406395 - L1MEc LINE L1 -3792 2423 1265 31 0 0 0 chr2 1282652 1282683 -249405171 + AT_rich Low_complexity Low_complexity 1 31 0 603 196 227 54 chr2 1284138 1284501 -249403353 - MLT1C LTR MaLR 0 390 1 289 310 90 19 chr2 1286441 1286709 -249401145 - LTR16C LTR ERVL -18 473 187 246 128 0 0 chr2 1286997 1287036 -249400818 + (TG)n Simple_repeat Simple_repeat 2 40 0 384 305 148 24 chr2 1287106 1287316 -249400538 - MIR SINE MIR -7 255 20 230 288 0 15 chr2 1287956 1288022 -249399832 - MIR SINE MIR -176 86 22 333 235 6 41 chr2 1288365 1288535 -249399319 + GA-rich Low_complexity Low_complexity 4 167 0 505 303 109 45 chr2 1288539 1289007 -249398847 - L2 LINE L2 -1686 1628 1131 208 326 57 7 chr2 1289028 1289169 -249398685 - L2 LINE L2 -2879 435 288 243 114 0 89 chr2 1289215 1289294 -249398560 + (TAATG)n Simple_repeat Simple_repeat 4 75 0 1352 271 130 23 chr2 1289337 1289989 -249397865 - L2 LINE L2 -2381 933 212 437 194 121 40 chr2 1289997 1290121 -249397733 - MER45A DNA AcHobo -35 143 10 199 268 177 30 chr2 1290150 1290314 -249397540 - L2 LINE L2 -3091 223 36 536 144 25 8 chr2 1291237 1291355 -249396499 + CT-rich Low_complexity Low_complexity 3 122 0 225 284 211 16 chr2 1291359 1291553 -249396301 + L2 LINE L2 1607 1838 -1476 1399 262 203 41 chr2 1291653 1292203 -249395651 + L2 LINE L2 2054 2513 -800 1707 166 3 18 chr2 1292203 1292518 -249395336 - AluSx SINE Alu 0 313 3 1399 262 203 41 chr2 1292518 1292999 -249394855 + L2 LINE L2 2513 3287 -26 1992 72 103 0 chr2 1295089 1295382 -249392472 + AluSp SINE Alu 1 320 0 15668 113 82 4 chr2 1295488 1295500 -249392354 - L1P LINE L1 -2149 3997 3987 9439 93 9 2 chr2 1295500 1297542 -249390312 - L1PA7 LINE L1 -3 6466 4427 15668 113 82 4 chr2 1297542 1298885 -249388969 - L1P LINE L1 -2159 3987 2751 396 0 0 0 chr2 1298885 1298929 -249388925 + (TA)n Simple_repeat Simple_repeat 2 45 0 15668 113 82 4 chr2 1298929 1300082 -249387772 - L1P LINE L1 -3395 2751 1291 414 103 0 0 chr2 1300079 1300137 -249387717 - L1PA7 LINE L1 -6393 68 11 * 3516 197 22 3 chr2 1300127 1300838 -249387016 - L1MB1 LINE L1 -190 5978 5254 1208 214 23 7 chr2 1300843 1301142 -249386712 - L1MB1 LINE L1 -3045 3101 2798 1157 264 32 19 chr2 1301142 1301456 -249386398 + MLT1E LTR MaLR 276 593 0 239 265 15 15 chr2 1302501 1302569 -249385285 + MIR SINE MIR 82 149 -113 192 158 0 0 chr2 1303792 1303830 -249384024 + CT-rich Low_complexity Low_complexity 2 39 0 860 275 36 20 chr2 1303890 1304141 -249383713 + MIR SINE MIR 5 259 -3 348 24 0 0 chr2 1304844 1304885 -249382969 + (TG)n Simple_repeat Simple_repeat 2 42 0 1440 282 123 17 chr2 1305593 1306128 -249381726 - MLT1E LTR MaLR 0 593 2 234 241 41 123 chr2 1306391 1306561 -249381293 + L2 LINE L2 2926 3081 -191 359 247 0 7 chr2 1306606 1306760 -249381094 + (CTA)n Simple_repeat Simple_repeat 1 153 0 288 289 117 0 chr2 1306841 1306969 -249380885 - MIR SINE MIR -8 254 112 2054 118 52 17 chr2 1307053 1307400 -249380454 + L1MA5A LINE L1 5936 6294 -3 234 244 219 24 chr2 1307611 1307734 -249380120 + MIR SINE MIR 115 261 -1 256 263 98 44 chr2 1309486 1309802 -249378052 - L1ME LINE L1 -4085 2176 1844 281 183 92 0 chr2 1309808 1309928 -249377926 - L1M4 LINE L1 -1712 4434 4304 342 250 100 17 chr2 1310727 1310847 -249377007 - L1M4 LINE L1 -1898 4248 4119 * 1440 254 94 58 chr2 1310845 1312269 -249375585 - L1ME LINE L1 -4448 1813 323 2247 222 14 30 chr2 1312694 1313203 -249374651 + MLT1D LTR MaLR 5 505 0 24 0 0 0 chr2 1313657 1313681 -249374173 + AT_rich Low_complexity Low_complexity 1 24 0 241 257 175 33 chr2 1313827 1314010 -249373844 + MLT1J2 LTR MaLR 228 436 -10 752 197 48 69 chr2 1314424 1314612 -249373242 + MER20 DNA MER1_type 36 219 0 187 286 208 31 chr2 1318159 1318351 -249369503 + L2 LINE L2 3086 3311 -2 * 211 277 0 0 chr2 1318349 1318396 -249369458 - L2 LINE L2 -26 3246 3200 191 143 20 51 chr2 1318463 1318561 -249369293 + (TA)n Simple_repeat Simple_repeat 1 95 0 286 292 20 119 chr2 1318601 1318803 -249369051 + MIR SINE MIR 2 183 -79 1444 216 58 50 chr2 1319074 1319436 -249368418 + MLT1A1 LTR MaLR 1 365 0 2022 146 0 0 chr2 1319493 1319780 -249368074 + AluSx SINE Alu 1 287 -25 643 241 65 12 chr2 1319795 1319965 -249367889 + MER5A DNA MER1_type 11 189 0 391 287 130 28 chr2 1321559 1321775 -249366079 + MIR SINE MIR 20 257 -5 304 327 0 19 chr2 1321797 1321901 -249365953 + MIR SINE MIR 117 218 -44 391 191 154 29 chr2 1322151 1322287 -249365567 + L1ME4a LINE L1 5961 6113 -8 270 151 57 0 chr2 1322536 1322589 -249365265 + L2 LINE L2 3217 3272 0 305 276 48 129 chr2 1322959 1323463 -249364391 + L2 LINE L2 2810 3272 0 199 242 0 121 chr2 1323572 1323663 -249364191 - MIR SINE MIR -95 167 88 197 339 0 0 chr2 1324475 1324531 -249363323 - MIR SINE MIR -68 140 85 3202 31 3 5 chr2 1324644 1325034 -249362820 - L1PA4 LINE L1 -1 6154 5766 359 150 25 12 chr2 1325035 1325115 -249362739 - L1MB8 LINE L1 -1 6177 6097 4455 250 105 52 chr2 1325118 1326975 -249360879 - L1ME1 LINE L1 -150 6827 5071 309 64 21 0 chr2 1326975 1327022 -249360832 - MADE1 DNA Mariner -2 78 31 4455 250 105 52 chr2 1327022 1327053 -249360801 - L1ME1 LINE L1 -1906 5071 5043 304 18 196 0 chr2 1327053 1327109 -249360745 - MADE1 DNA Mariner -13 67 1 4455 250 105 52 chr2 1327109 1327940 -249359914 - L1ME1 LINE L1 -1934 5043 4258 2836 13 0 0 chr2 1327940 1328251 -249359603 - AluYa5 SINE Alu 0 311 1 4455 250 105 52 chr2 1328251 1328352 -249359502 - L1ME1 LINE L1 -2719 4258 4164 2784 19 0 0 chr2 1328352 1328664 -249359190 - AluYb8 SINE Alu -6 312 1 4455 250 105 52 chr2 1328664 1330101 -249357753 - L1ME1 LINE L1 -2813 4164 2069 944 252 53 55 chr2 1330115 1330871 -249356983 - L1ME1 LINE L1 -4900 1955 1215 274 316 128 15 chr2 1331118 1331314 -249356540 - L1ME1 LINE L1 -6613 246 29 681 13 0 0 chr2 1332458 1332536 -249355318 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 358 266 32 96 chr2 1333239 1333427 -249354427 - MIR SINE MIR -52 210 35 276 379 73 10 chr2 1333933 1334139 -249353715 + L2 LINE L2 2375 2593 -721 41 21 0 0 chr2 1334418 1334466 -249353388 + AT_rich Low_complexity Low_complexity 1 48 0 192 259 107 71 chr2 1334842 1334954 -249352900 - L3 LINE CR1 -1117 460 345 297 284 39 39 chr2 1335183 1335338 -249352516 - LTR33 LTR ERVL -22 499 345 583 300 82 8 chr2 1335338 1335581 -249352273 + L2 LINE L2 224 484 -2830 673 298 108 20 chr2 1335659 1336059 -249351795 + L3 LINE CR1 1111 1545 -32 340 191 24 0 chr2 1336158 1336242 -249351612 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 716 321 111 14 chr2 1336618 1336976 -249350878 + L2 LINE L2 2606 2995 -318 198 243 229 0 chr2 1337842 1337912 -249349942 + MIR SINE MIR 171 256 -6 41026 34 21 2 chr2 1338226 1344277 -249343577 + L1PA3 LINE L1 1 6171 0 215 244 0 0 chr2 1344874 1344915 -249342939 + MER5B DNA MER1_type 6 46 -132 219 125 0 0 chr2 1345119 1345159 -249342695 + (TG)n Simple_repeat Simple_repeat 2 41 0 215 198 129 52 chr2 1345290 1345356 -249342498 + MIR SINE MIR 121 180 -82 1713 178 22 73 chr2 1345356 1345767 -249342087 + MLT1B LTR MaLR 1 390 0 215 198 129 52 chr2 1345767 1345816 -249342038 + MIR SINE MIR 180 245 -17 34 72 0 0 chr2 1345869 1345938 -249341916 + AT_rich Low_complexity Low_complexity 1 69 0 4372 171 47 39 chr2 1346054 1347230 -249340624 - L1MC1 LINE L1 -23 6310 5125 262 270 20 30 chr2 1347254 1347354 -249340500 - MIR SINE MIR -25 237 139 3981 236 28 21 chr2 1347372 1348656 -249339198 - L1MC1 LINE L1 -1058 5088 3796 1828 162 41 22 chr2 1348661 1349128 -249338726 + MLT2A2 LTR ERVL 1 370 -83 894 111 62 0 chr2 1349128 1349272 -249338582 - LTR9-int LTR ERV1 -47 8872 8720 540 194 8 15 chr2 1349426 1349560 -249338294 - LTR9-int LTR ERV1 -2450 2565 2433 * 800 160 11 11 chr2 1349551 1349726 -249338128 - LTR9-int LTR ERV1 -3693 4123 3949 26621 171 41 46 chr2 1349730 1356691 -249331163 - LTR9-int LTR ERV1 -471 6947 22 3428 133 68 22 chr2 1356712 1357297 -249330557 - LTR9 LTR ERV1 0 612 1 1594 94 0 31 chr2 1357297 1357551 -249330303 + HERVL-A2 LTR ERVL 5409 5654 0 1954 170 56 33 chr2 1357551 1358078 -249329776 + MLT2A2 LTR ERVL 1 554 0 1103 279 42 5 chr2 1358078 1358505 -249329349 - L1MC1 LINE L1 -2351 3795 3353 23 33 0 0 chr2 1358839 1358869 -249328985 + AT_rich Low_complexity Low_complexity 1 30 0 185 116 0 47 chr2 1359083 1359126 -249328728 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 842 141 88 0 chr2 1359335 1359505 -249328349 + L1MB3 LINE L1 5998 6182 -1 2118 137 45 31 chr2 1359525 1359703 -249328151 + THE1B LTR MaLR 1 175 -189 2252 78 41 0 chr2 1359703 1359998 -249327856 + AluY SINE Alu 1 307 -4 2118 137 45 31 chr2 1359998 1360178 -249327676 + THE1B LTR MaLR 175 364 0 2302 99 0 40 chr2 1362543 1362866 -249324988 + AluSq SINE Alu 1 310 -3 555 262 47 58 chr2 1364917 1365089 -249322765 + MIR SINE MIR 27 196 -66 349 203 80 129 chr2 1365092 1365255 -249322599 - L2 LINE L2 0 3313 3159 321 109 0 0 chr2 1365259 1365314 -249322540 + (T)n Simple_repeat Simple_repeat 1 55 0 2240 78 0 0 chr2 1366092 1366421 -249321433 - AluY SINE Alu 0 329 1 277 136 30 76 chr2 1367206 1367272 -249320582 - HERV17 LTR ERV1 -6241 2385 2323 839 209 32 13 chr2 1369276 1369555 -249318299 + MLT1B LTR MaLR 5 360 -30 2091 154 36 39 chr2 1369564 1369927 -249317927 - THE1B LTR MaLR -2 362 1 280 249 90 57 chr2 1370814 1370991 -249316863 - L1ME3A LINE L1 -202 5968 5786 25 75 0 0 chr2 1371467 1371520 -249316334 + AT_rich Low_complexity Low_complexity 1 53 0 430 180 50 0 chr2 1372193 1372342 -249315512 + L1PBa LINE L1 1093 1394 -5469 * 4250 204 70 7 chr2 1372338 1373315 -249314539 - L1PBa LINE L1 -5820 1043 6 411 212 186 17 chr2 1374401 1374519 -249313335 + LTR40a LTR ERVL 1 138 -381 387 252 62 12 chr2 1374698 1374813 -249313041 + LTR40a LTR ERVL 251 414 -93 1886 157 165 11 chr2 1377875 1378245 -249309609 + MSTA LTR MaLR 1 427 -1 231 287 37 9 chr2 1378384 1378492 -249309362 + LTR67 LTR ERVL 444 554 -3 197 231 0 0 chr2 1378584 1378623 -249309231 + MIR SINE MIR 117 155 -107 1261 143 63 68 chr2 1379795 1380047 -249307807 - L1MA8 LINE L1 -422 5869 5619 479 135 0 0 chr2 1380047 1380121 -249307733 + L1MA7 LINE L1 6218 6291 0 1208 69 0 0 chr2 1381564 1381708 -249306146 + AluSp/q SINE Alu 161 304 -9 412 73 0 0 chr2 1381802 1381857 -249305997 - MLT2A2 LTR ERVL 0 453 399 763 98 14 43 chr2 1381857 1382229 -249305625 + (TA)n Simple_repeat Simple_repeat 1 361 0 2477 127 62 3 chr2 1382233 1382619 -249305235 - MLT2A2 LTR ERVL -44 409 1 2068 129 3 22 chr2 1382822 1383140 -249304714 + AluSx SINE Alu 1 312 0 219 324 0 14 chr2 1383362 1383436 -249304418 + A-rich Low_complexity Low_complexity 5 77 0 27 81 0 0 chr2 1383498 1383560 -249304294 + AT_rich Low_complexity Low_complexity 1 62 0 299 260 20 103 chr2 1383835 1383981 -249303873 - L2 LINE L2 0 3313 3180 2419 88 0 0 chr2 1384094 1384399 -249303455 - AluSc SINE Alu -4 305 1 183 167 0 0 chr2 1385938 1385980 -249301874 + GA-rich Low_complexity Low_complexity 2 43 0 787 176 0 0 chr2 1386115 1386240 -249301614 + AluJb SINE Alu 172 296 -16 391 300 29 19 chr2 1386357 1386567 -249301287 - HAL1 LINE L1 -282 2225 2014 21 71 0 0 chr2 1386633 1386675 -249301179 + AT_rich Low_complexity Low_complexity 1 42 0 346 220 18 28 chr2 1386772 1386881 -249300973 - L1MA9 LINE L1 -222 6090 5983 851 223 114 136 chr2 1387717 1387922 -249299932 - Charlie2 DNA MER1_type -51 2811 2603 2283 86 0 3 chr2 1387922 1388213 -249299641 + AluSx SINE Alu 1 290 -22 851 223 114 136 chr2 1388213 1389051 -249298803 - Charlie2 DNA MER1_type -259 2603 1791 620 179 32 0 chr2 1389067 1389190 -249298664 + L1MA4 LINE L1 6172 6298 -2 218 152 53 20 chr2 1389199 1389350 -249298504 + (TATAA)n Simple_repeat Simple_repeat 4 159 0 23 33 0 0 chr2 1389362 1389392 -249298462 + AT_rich Low_complexity Low_complexity 1 30 0 246 174 33 16 chr2 1389397 1389518 -249298336 + (TA)n Simple_repeat Simple_repeat 1 123 0 22 70 0 0 chr2 1389579 1389622 -249298232 + AT_rich Low_complexity Low_complexity 1 43 0 208 167 42 24 chr2 1389624 1389792 -249298062 + (TATAA)n Simple_repeat Simple_repeat 4 174 0 231 120 101 38 chr2 1389795 1389953 -249297901 + (TTATA)n Simple_repeat Simple_repeat 5 172 0 257 250 38 50 chr2 1390285 1390365 -249297489 + MER5A DNA MER1_type 106 184 -5 187 246 211 0 chr2 1390546 1390603 -249297251 + L2 LINE L2 3233 3301 -12 997 152 5 91 chr2 1390603 1390801 -249297053 + AluJo SINE Alu 84 264 -48 2321 70 13 20 chr2 1390868 1391170 -249296684 + AluSc SINE Alu 3 302 -7 315 0 0 0 chr2 1391736 1391771 -249296083 + (CA)n Simple_repeat Simple_repeat 2 36 0 763 216 0 8 chr2 1392481 1392615 -249295239 + FLAM_A SINE Alu 1 133 0 466 252 25 0 chr2 1392845 1392964 -249294890 - Charlie8 DNA MER1_type -2250 167 46 1809 158 127 82 chr2 1393387 1393850 -249294004 - MER74A LTR ERVL -60 498 15 23 0 0 0 chr2 1395148 1395171 -249292683 + GC_rich Low_complexity Low_complexity 1 23 0 236 53 26 0 chr2 1396173 1396211 -249291643 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1515 176 47 0 chr2 1396218 1396496 -249291358 - AluJo SINE Alu -21 291 1 304 231 15 0 chr2 1396498 1396563 -249291291 - MIR SINE MIR -106 102 37 2166 111 14 0 chr2 1397818 1398115 -249289739 + AluSx SINE Alu 1 301 -11 498 179 0 0 chr2 1398457 1398541 -249289313 + Alu SINE Alu 219 302 -9 1081 234 75 44 chr2 1398552 1398937 -249288917 + L1MC5 LINE L1 7521 7917 -44 2034 222 92 25 chr2 1398957 1399524 -249288330 + L1ME3A LINE L1 5554 6158 -12 30 0 0 0 chr2 1399524 1399554 -249288300 + AT_rich Low_complexity Low_complexity 1 30 0 1156 71 0 0 chr2 1399567 1399707 -249288147 + AluSq SINE Alu 33 172 -141 518 272 70 35 chr2 1400138 1400366 -249287488 - MIR SINE MIR -10 252 17 265 121 35 69 chr2 1401129 1401187 -249286667 - MLT1C LTR MaLR -411 56 1 966 191 0 0 chr2 1401790 1401947 -249285907 + FRAM SINE Alu 5 161 -5 1845 130 0 60 chr2 1403066 1403426 -249284428 - AluSx SINE Alu 0 342 1 2235 96 0 3 chr2 1403873 1404166 -249283688 - AluSx SINE Alu -3 309 18 2006 144 3 0 chr2 1404493 1404791 -249283063 - AluSx SINE Alu -13 299 1 297 281 111 79 chr2 1404808 1405162 -249282692 - L1MC4 LINE L1 -9 8033 7550 381 257 19 9 chr2 1405335 1405440 -249282414 - L1MC4 LINE L1 -1 8041 7936 286 250 95 27 chr2 1405445 1405593 -249282261 - L1MC4 LINE L1 -196 7846 7689 * 519 196 89 18 chr2 1405581 1405742 -249282112 - L1MC4 LINE L1 -385 7460 7254 341 252 53 73 chr2 1405747 1405824 -249282030 - L1MC4 LINE L1 -780 7262 7188 1850 166 0 13 chr2 1405824 1406126 -249281728 + AluJb SINE Alu 2 299 -13 341 252 53 73 chr2 1406126 1406199 -249281655 - L1MC4 LINE L1 -854 7188 7115 180 0 0 0 chr2 1406325 1406345 -249281509 + (A)n Simple_repeat Simple_repeat 1 20 0 1665 126 65 51 chr2 1406893 1407187 -249280667 - AluJb SINE Alu -14 298 1 239 143 102 0 chr2 1407736 1407785 -249280069 + L2 LINE L2 3248 3301 -12 2059 102 60 0 chr2 1408329 1408612 -249279242 + AluSx SINE Alu 1 300 -12 286 313 81 0 chr2 1408614 1408713 -249279141 - L2 LINE L2 -14 3299 3193 1058 184 40 0 chr2 1408951 1409179 -249278675 + L1MA4 LINE L1 6060 6296 -4 288 212 61 30 chr2 1409420 1409486 -249278368 + MIR SINE MIR 34 101 -107 284 299 118 16 chr2 1409514 1409641 -249278213 + MIR SINE MIR 93 232 -30 230 289 0 0 chr2 1410580 1410632 -249277222 + polypyrimidine Low_complexity Low_complexity 3 54 0 647 257 63 54 chr2 1410876 1411098 -249276756 + MER58A DNA MER1_type 1 224 0 351 314 102 44 chr2 1411109 1411335 -249276519 - L1MC4a LINE L1 -393 7415 7177 721 297 91 24 chr2 1411390 1411807 -249276047 - L1MC4 LINE L1 -881 7161 6717 22 0 0 0 chr2 1411966 1411988 -249275866 + AT_rich Low_complexity Low_complexity 1 22 0 391 203 183 110 chr2 1412326 1412572 -249275282 - LTR41 LTR ERVL -507 266 3 1303 274 90 37 chr2 1412576 1413312 -249274542 - L1MCc LINE L1 -4887 1536 935 1941 176 58 26 chr2 1413536 1413577 -249274277 - MLT2A2 LTR ERVL 0 554 516 450 0 0 0 chr2 1413577 1413627 -249274227 + (TA)n Simple_repeat Simple_repeat 2 51 0 1941 176 58 26 chr2 1413627 1414114 -249273740 - MLT2A2 LTR ERVL -38 516 1 1074 283 28 33 chr2 1414166 1414593 -249273261 - L1MCc LINE L1 -5985 438 14 392 386 48 21 chr2 1414595 1414932 -249272922 + L1MC/D LINE L1 5463 5808 -2000 594 278 7 0 chr2 1415207 1415351 -249272503 - MIR SINE MIR -51 211 67 183 139 0 0 chr2 1415660 1415696 -249272158 + (T)n Simple_repeat Simple_repeat 1 36 0 349 329 83 23 chr2 1415696 1415912 -249271942 - MLT1J LTR MaLR -247 264 36 2441 78 0 3 chr2 1416115 1416421 -249271433 - AluY SINE Alu -6 305 1 344 308 245 9 chr2 1416802 1417133 -249270721 - MLT1I LTR MaLR 0 409 1 30 45 0 0 chr2 1417150 1417194 -249270660 + AT_rich Low_complexity Low_complexity 1 44 0 283 313 46 28 chr2 1417984 1418201 -249269653 + LTR33 LTR ERVL 301 521 0 288 0 0 0 chr2 1418423 1418455 -249269399 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 241 238 109 30 chr2 1418693 1418794 -249269060 + LTR50 LTR ERVL 104 212 -583 635 261 188 12 chr2 1418797 1419142 -249268712 + LTR50 LTR ERVL 390 795 0 228 305 32 7 chr2 1421280 1421434 -249266420 - L1M4 LINE L1 -1456 4690 4533 1173 257 136 83 chr2 1421493 1421840 -249266014 - MLT1E3 LTR MaLR -2 622 230 1609 187 10 17 chr2 1421840 1422129 -249265725 - AluJo SINE Alu -25 287 1 1173 257 136 83 chr2 1422129 1422369 -249265485 - MLT1E3 LTR MaLR -394 230 4 2446 271 74 13 chr2 1422713 1423922 -249263932 + L1ME1 LINE L1 2583 3864 -2282 1623 228 19 71 chr2 1423931 1424449 -249263405 - MLT1D LTR MaLR -14 491 1 725 250 128 78 chr2 1424449 1424579 -249263275 + L1ME1 LINE L1 3860 3982 -2164 411 83 0 0 chr2 1424579 1424639 -249263215 + (CA)n Simple_repeat Simple_repeat 1 60 0 725 250 128 78 chr2 1424639 1425024 -249262830 + L1ME1 LINE L1 3982 4401 -1745 * 1659 256 34 34 chr2 1425022 1425902 -249261952 + L1ME1 LINE L1 4783 6103 -63 36 40 0 0 chr2 1425931 1425981 -249261873 + AT_rich Low_complexity Low_complexity 1 50 0 27 29 0 0 chr2 1426060 1426094 -249261760 + AT_rich Low_complexity Low_complexity 1 34 0 3642 221 20 7 chr2 1426248 1426960 -249260894 + MER44D DNA MER2_type 13 605 0 21 0 0 0 chr2 1426974 1426995 -249260859 + AT_rich Low_complexity Low_complexity 1 21 0 1527 116 0 22 chr2 1428268 1428492 -249259362 - AluSx SINE Alu -93 219 1 496 288 29 62 chr2 1428673 1428947 -249258907 - L2 LINE L2 -850 2464 2200 211 247 86 25 chr2 1429202 1429283 -249258571 - MIR SINE MIR -113 149 64 23 0 0 0 chr2 1429692 1429715 -249258139 + AT_rich Low_complexity Low_complexity 1 23 0 998 311 58 15 chr2 1430731 1431143 -249256711 + L2 LINE L2 2371 2800 -514 391 184 58 29 chr2 1431623 1431797 -249256057 + (TG)n Simple_repeat Simple_repeat 1 179 0 1412 123 21 16 chr2 1432056 1432299 -249255555 + L1MA6 LINE L1 6053 6296 -4 287 319 61 52 chr2 1432837 1433066 -249254788 + MLT1K LTR MaLR 340 570 -18 314 250 24 12 chr2 1434036 1434120 -249253734 - L2 LINE L2 -3 3310 3226 214 290 48 0 chr2 1434296 1434358 -249253496 + MIR SINE MIR 98 162 -100 39 0 0 0 chr2 1436189 1436228 -249251626 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 1436527 1436557 -249251297 + AT_rich Low_complexity Low_complexity 1 30 0 641 163 0 7 chr2 1437741 1437882 -249249972 + GA-rich Low_complexity Low_complexity 3 142 0 273 119 0 0 chr2 1437875 1437917 -249249937 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 * 772 151 0 27 chr2 1437952 1438137 -249249717 + GA-rich Low_complexity Low_complexity 1 180 0 821 180 16 5 chr2 1438160 1438566 -249249288 + GA-rich Low_complexity Low_complexity 1 410 0 204 194 0 0 chr2 1438579 1438615 -249249239 + GA-rich Low_complexity Low_complexity 3 38 0 476 279 86 96 chr2 1439049 1439444 -249248410 + HAL1 LINE L1 1119 1509 -998 266 197 197 70 chr2 1439504 1439599 -249248255 + MIR SINE MIR 105 225 -37 928 176 88 123 chr2 1439599 1439974 -249247880 - MLT1A1 LTR MaLR 0 365 4 266 197 197 70 chr2 1439974 1440007 -249247847 + MIR SINE MIR 225 252 -10 32 43 0 0 chr2 1440230 1440276 -249247578 + AT_rich Low_complexity Low_complexity 1 46 0 208 262 66 16 chr2 1440611 1440672 -249247182 - MIR SINE MIR -72 190 127 383 95 14 176 chr2 1440984 1441194 -249246660 + (TA)n Simple_repeat Simple_repeat 2 177 0 272 126 31 99 chr2 1441232 1441423 -249246431 + (TA)n Simple_repeat Simple_repeat 2 179 0 289 183 59 6 chr2 1441467 1441636 -249246218 + (TA)n Simple_repeat Simple_repeat 2 179 0 4134 150 37 6 chr2 1442245 1442966 -249244888 - MER49 LTR ERV1 -9 914 171 217 211 40 13 chr2 1442966 1443042 -249244812 + (TG)n Simple_repeat Simple_repeat 1 78 0 29 0 0 0 chr2 1443260 1443289 -249244565 + AT_rich Low_complexity Low_complexity 1 29 0 802 317 46 19 chr2 1444349 1444718 -249243136 - MLT1J LTR MaLR -20 491 113 2008 157 0 0 chr2 1445059 1445353 -249242501 - AluSg SINE Alu -16 294 1 2209 100 3 7 chr2 1445453 1445754 -249242100 + AluSx SINE Alu 1 300 -12 225 0 0 0 chr2 1445903 1445928 -249241926 + (A)n Simple_repeat Simple_repeat 1 25 0 2306 173 28 16 chr2 1446839 1447266 -249240588 + Tigger2a DNA MER2_type 3 434 0 715 140 0 0 chr2 1448211 1448318 -249239536 + AluSq/x SINE Alu 1 107 -205 22 0 0 0 chr2 1448357 1448379 -249239475 + AT_rich Low_complexity Low_complexity 1 22 0 1537 251 92 11 chr2 1448578 1449013 -249238841 + L1MDa LINE L1 3 472 -6068 638 191 0 20 chr2 1449090 1449237 -249238617 + L1MD1 LINE L1 6099 6242 0 363 108 0 77 chr2 1449379 1449444 -249238410 - MLT2B1 LTR ERVL -348 66 7 272 346 0 0 chr2 1450229 1450333 -249237521 + GA-rich Low_complexity Low_complexity 3 106 0 1063 267 18 7 chr2 1450931 1451204 -249236650 + L1M4c LINE L1 1 276 -6108 273 130 0 0 chr2 1451196 1451242 -249236612 + L1M4c LINE L1 1442 1487 -4897 * 27 29 0 0 chr2 1451327 1451361 -249236493 + AT_rich Low_complexity Low_complexity 1 34 0 214 191 0 0 chr2 1451485 1451527 -249236327 + A-rich Low_complexity Low_complexity 1 42 0 1057 259 73 79 chr2 1452245 1453786 -249234068 + L1MDa LINE L1 1128 2622 -3918 683 260 82 86 chr2 1453908 1453969 -249233885 + L1MDa LINE L1 2715 2775 -3765 1653 160 60 41 chr2 1453969 1454337 -249233517 + THE1C LTR MaLR 1 375 0 8592 153 18 43 chr2 1454339 1455957 -249231897 + THE1C-int LTR MaLR 3 1580 0 1490 167 53 61 chr2 1455957 1456335 -249231519 + THE1C LTR MaLR 1 375 0 683 260 82 86 chr2 1456335 1457022 -249230832 + L1MDa LINE L1 2775 3465 -3075 3607 146 30 8 chr2 1457022 1457678 -249230176 + L1MA8 LINE L1 5621 6291 0 683 260 82 86 chr2 1457678 1457909 -249229945 + L1MDa LINE L1 3465 3695 -2845 824 187 55 55 chr2 1457923 1458142 -249229712 - MER20 DNA MER1_type 0 219 1 668 311 28 21 chr2 1458242 1458367 -249229487 + L1MDa LINE L1 3820 3943 -2597 567 113 0 0 chr2 1458367 1458447 -249229407 - MADE1 DNA Mariner 0 80 1 668 311 28 21 chr2 1458447 1458710 -249229144 + L1MDa LINE L1 3943 4211 -2329 205 266 0 0 chr2 1458737 1458801 -249229053 + A-rich Low_complexity Low_complexity 1 64 0 1972 151 0 0 chr2 1458909 1459213 -249228641 + AluSx SINE Alu 6 309 -3 2222 109 3 0 chr2 1459219 1459522 -249228332 + AluSg SINE Alu 1 304 -6 27 29 0 0 chr2 1459658 1459692 -249228162 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 1459917 1459938 -249227916 + AT_rich Low_complexity Low_complexity 1 21 0 427 79 0 16 chr2 1459995 1460058 -249227796 - MADE1 DNA Mariner -18 62 1 271 258 44 38 chr2 1460074 1460233 -249227621 + L1MDa LINE L1 4894 5053 -1487 719 230 143 15 chr2 1460690 1460955 -249226899 - MER46C DNA MER2_type -39 299 1 655 182 64 51 chr2 1461146 1461356 -249226498 - MLT1B LTR MaLR 0 390 173 24 67 0 0 chr2 1461658 1461703 -249226151 + AT_rich Low_complexity Low_complexity 1 45 0 209 185 15 0 chr2 1461777 1461842 -249226012 + (TAG)n Simple_repeat Simple_repeat 3 68 0 693 288 45 0 chr2 1461844 1462042 -249225812 - MIR SINE MIR 0 262 56 234 169 0 84 chr2 1462388 1462459 -249225395 + MLT1H LTR MaLR 478 549 0 767 67 0 29 chr2 1462714 1462818 -249225036 + AluSg1 SINE Alu 1 101 -208 835 137 0 0 chr2 1463325 1463449 -249224405 + AluSg/x SINE Alu 154 277 -33 270 95 0 0 chr2 1463449 1463491 -249224363 + (CA)n Simple_repeat Simple_repeat 1 42 0 230 264 0 11 chr2 1464735 1464826 -249223028 + CT-rich Low_complexity Low_complexity 3 92 0 2175 116 0 3 chr2 1465192 1465512 -249222342 - AluSq SINE Alu 0 313 1 3136 213 50 3 chr2 1465560 1466254 -249221600 - MER44D DNA MER2_type -6 599 1 24 0 0 0 chr2 1469897 1469921 -249217933 + AT_rich Low_complexity Low_complexity 1 24 0 226 273 146 64 chr2 1471031 1471141 -249216713 - L2 LINE L2 -21 3251 3133 1853 100 93 4 chr2 1471793 1472093 -249215761 - AluSx SINE Alu 0 312 1 3289 114 16 0 chr2 1472125 1472632 -249215222 - L1PA13 LINE L1 -15 6148 5634 963 145 0 0 chr2 1472928 1473279 -249214575 + (TG)n Simple_repeat Simple_repeat 2 530 0 31 58 0 0 chr2 1473760 1473812 -249214042 + AT_rich Low_complexity Low_complexity 1 52 0 231 283 58 80 chr2 1474241 1474379 -249213475 - L2 LINE L2 -561 2753 2619 22 35 0 0 chr2 1475013 1475042 -249212812 + AT_rich Low_complexity Low_complexity 1 29 0 241 329 0 12 chr2 1476223 1476308 -249211546 + L2 LINE L2 3186 3269 -3 267 316 101 29 chr2 1476526 1476665 -249211189 - L2 LINE L2 0 3313 3165 351 180 0 0 chr2 1476703 1476764 -249211090 - Tigger5 DNA MER2_type 0 2323 2263 878 138 0 63 chr2 1476764 1476938 -249210916 + Tigger1 DNA MER2_type 1 163 -2255 * 1039 151 47 24 chr2 1476919 1477131 -249210723 + Tigger1 DNA MER2_type 2202 2418 0 1001 164 0 0 chr2 1477131 1477308 -249210546 - Tigger5 DNA MER2_type -59 2264 2088 328 180 16 0 chr2 1477332 1477393 -249210461 - Tigger5 DNA MER2_type -2261 62 1 364 317 145 6 chr2 1477594 1477938 -249209916 - L2 LINE L2 -376 2938 2547 192 358 15 60 chr2 1478318 1478452 -249209402 - L2 LINE L2 -265 3007 2880 224 122 24 0 chr2 1478592 1478633 -249209221 + (CA)n Simple_repeat Simple_repeat 1 42 0 391 282 79 54 chr2 1478634 1479044 -249208810 - MLT1L LTR MaLR -40 533 151 940 232 84 58 chr2 1479154 1479282 -249208572 + MLT1A2 LTR MaLR 6 129 -245 2444 61 0 3 chr2 1479282 1479575 -249208279 - AluY SINE Alu -19 292 1 940 232 84 58 chr2 1479575 1479791 -249208063 + MLT1A2 LTR MaLR 129 359 -15 336 266 148 0 chr2 1479930 1480058 -249207796 - MIR SINE MIR -12 250 104 1391 128 30 8 chr2 1480501 1480735 -249207119 + MSTB1 LTR MaLR 193 431 -1 185 393 28 9 chr2 1481579 1481686 -249206168 - MER5A DNA MER1_type -79 110 2 3437 57 40 2 chr2 1482606 1483060 -249204794 + L1PA8 LINE L1 5694 6164 -8 243 263 0 84 chr2 1483685 1483780 -249204074 + MER5A DNA MER1_type 55 141 -48 1935 301 133 50 chr2 1485998 1487407 -249200447 - L2 LINE L2 -545 2769 1244 1983 228 12 12 chr2 1487408 1487926 -249199928 - L1 LINE L1 -2302 3844 3327 409 109 0 0 chr2 1487926 1487990 -249199864 - L1 LINE L1 -3126 3020 2957 2138 128 26 64 chr2 1488004 1488504 -249199350 + L1PB4 LINE L1 5254 5734 -422 588 179 0 0 chr2 1488506 1488612 -249199242 + L1PB4 LINE L1 5835 5940 -216 845 168 0 0 chr2 1488629 1488748 -249199106 + FLAM_C SINE Alu 6 124 -19 839 234 0 10 chr2 1488764 1488956 -249198898 + L1PB4 LINE L1 5964 6153 -3 2113 127 0 3 chr2 1488966 1489266 -249198588 + AluSg SINE Alu 1 299 -11 323 221 15 0 chr2 1489266 1489334 -249198520 - L2 LINE L2 -2068 1246 1178 366 232 111 0 chr2 1489995 1490094 -249197760 + MIR SINE MIR 153 262 0 2185 96 6 13 chr2 1490342 1490655 -249197199 + AluY SINE Alu 1 311 0 10994 166 25 40 chr2 1492053 1495030 -249192824 + L1M1 LINE L1 22 3627 -3938 21791 130 14 77 chr2 1495039 1495439 -249192415 + L1P LINE L1 1 424 -5722 204 67 0 0 chr2 1495439 1495469 -249192385 + (TTG)n Simple_repeat Simple_repeat 2 31 0 21791 130 14 77 chr2 1495469 1499605 -249188249 + L1P LINE L1 424 4254 -1892 5867 66 19 0 chr2 1499605 1500370 -249187484 + L1PA7 LINE L1 5369 6153 -1 9409 205 12 4 chr2 1500370 1502502 -249185352 + L1M1 LINE L1 3641 5788 -1777 46 19 0 0 chr2 1502514 1502567 -249185287 + AT_rich Low_complexity Low_complexity 1 53 0 2681 71 14 6 chr2 1502725 1503090 -249184764 - L1PB1 LINE L1 -7 6144 5777 725 225 31 0 chr2 1503713 1503873 -249183981 - MER45A DNA AcHobo -10 168 4 341 340 95 16 chr2 1503874 1504247 -249183607 + ERVL LTR ERVL 4674 5114 -528 432 299 121 17 chr2 1504596 1504894 -249182960 + LTR16A LTR ERVL 16 344 -106 899 317 37 24 chr2 1505282 1506218 -249181636 - HERV16 LTR ERVL -2347 2649 1674 413 383 44 0 chr2 1506249 1506500 -249181354 - HERV16 LTR ERVL -3418 1578 1317 1653 163 73 12 chr2 1507259 1507602 -249180252 - MLT1A1 LTR MaLR 0 365 2 27 0 0 0 chr2 1509974 1510001 -249177853 + AT_rich Low_complexity Low_complexity 1 27 0 1061 268 34 54 chr2 1510022 1510556 -249177298 + MER119 DNA MER1_type 51 573 -10 1238 145 108 0 chr2 1511380 1511621 -249176233 + L1MC1 LINE L1 6065 6331 -2 187 250 0 0 chr2 1512591 1512631 -249175223 - MER5A DNA MER1_type -22 167 128 364 118 61 19 chr2 1512879 1513099 -249174755 + (TAGA)n Simple_repeat Simple_repeat 1 229 0 346 287 42 75 chr2 1513310 1513575 -249174279 + L1M4 LINE L1 3545 3800 -2346 1902 158 6 16 chr2 1513997 1514308 -249173546 - AluJb SINE Alu -3 309 2 302 289 29 0 chr2 1514313 1514417 -249173437 + HAL1b LINE L1 1241 1347 -1 452 315 164 6 chr2 1514446 1514770 -249173084 - L1ME4a LINE L1 -7 6114 5740 304 256 0 26 chr2 1515149 1515227 -249172627 + MIR SINE MIR 68 143 -119 2255 112 0 0 chr2 1516677 1516971 -249170883 + AluSg1 SINE Alu 1 294 -15 2433 102 120 5 chr2 1517063 1517446 -249170408 - MSTA LTR MaLR -1 427 1 218 357 48 0 chr2 1518210 1518294 -249169560 - L2 LINE L2 -94 3178 3091 5180 50 8 2 chr2 1518416 1518428 -249169426 - L1PA8 LINE L1 -5 6167 6157 279 0 0 0 chr2 1518428 1518459 -249169395 + (TA)n Simple_repeat Simple_repeat 1 31 0 5180 50 8 2 chr2 1518459 1519090 -249168764 - L1PA8 LINE L1 -15 6157 5520 245 202 44 79 chr2 1519112 1519226 -249168628 - L1ME4a LINE L1 -462 5659 5550 230 276 201 22 chr2 1519682 1519816 -249168038 + MIR SINE MIR 71 228 -34 669 136 149 19 chr2 1519876 1520030 -249167824 + MSTA LTR MaLR 224 397 -31 1928 152 10 3 chr2 1520083 1520379 -249167475 - AluSx SINE Alu -14 298 1 939 276 121 27 chr2 1520620 1521099 -249166755 - L1ME1 LINE L1 -50 6116 5593 737 247 13 31 chr2 1521097 1521324 -249166530 + L1MEc LINE L1 45 267 -6129 * 709 273 41 9 chr2 1521317 1521658 -249166196 + L1MEc LINE L1 2306 2657 -3558 * 296 229 84 0 chr2 1521666 1521749 -249166105 - L1M4 LINE L1 -3419 2727 2638 1973 266 35 38 chr2 1521761 1522599 -249165255 - MLT1D-int LTR MaLR -534 837 3 1945 136 14 33 chr2 1522605 1522966 -249164888 - THE1B LTR MaLR -10 354 1 2522 103 12 18 chr2 1522966 1523365 -249164489 - THE1B-int LTR MaLR 0 1580 1184 1657 238 41 19 chr2 1523374 1523858 -249163996 - MLT1D LTR MaLR -8 497 3 338 293 136 0 chr2 1524568 1524708 -249163146 - MIR SINE MIR -1 261 103 223 304 72 0 chr2 1525309 1525378 -249162476 + MIR SINE MIR 98 171 -91 21 71 0 0 chr2 1525661 1525703 -249162151 + AT_rich Low_complexity Low_complexity 1 42 0 2345 84 7 0 chr2 1526107 1526405 -249161449 + AluSg SINE Alu 6 305 -5 193 349 77 31 chr2 1526406 1526601 -249161253 - L2 LINE L2 -546 2768 2565 725 86 48 0 chr2 1526649 1526754 -249161100 + AluSg/x SINE Alu 189 298 -12 768 213 26 31 chr2 1527252 1527499 -249160355 - L1MA9 LINE L1 -6 6285 6042 26 0 0 0 chr2 1529498 1529524 -249158330 + AT_rich Low_complexity Low_complexity 1 26 0 2318 102 6 10 chr2 1529600 1529914 -249157940 - AluSq SINE Alu 0 313 1 681 216 14 56 chr2 1530345 1530558 -249157296 - MER3 DNA MER1_type -4 205 2 1804 27 5 0 chr2 1530812 1531031 -249156823 - L1PA4 LINE L1 -1 6154 5935 772 11 0 0 chr2 1531031 1531121 -249156733 + L1PA5 LINE L1 5795 5884 -270 202 204 0 23 chr2 1531283 1531327 -249156527 - L2 LINE L2 -4 3309 3267 180 0 0 0 chr2 1532036 1532056 -249155798 + (A)n Simple_repeat Simple_repeat 1 20 0 1802 158 3 34 chr2 1532593 1532915 -249154939 - AluJb SINE Alu 0 312 1 197 331 0 66 chr2 1532953 1533074 -249154780 - L2 LINE L2 -188 3125 3013 198 0 0 0 chr2 1533077 1533099 -249154755 + (GGAGA)n Simple_repeat Simple_repeat 5 26 0 2145 131 0 0 chr2 1533824 1534115 -249153739 - AluSx SINE Alu -21 291 1 1906 47 0 0 chr2 1534408 1534641 -249153213 - L1PA7 LINE L1 -3 6151 5919 321 314 83 70 chr2 1534732 1535118 -249152736 + L1 LINE L1 3850 4240 -1906 368 325 145 21 chr2 1535164 1535632 -249152222 + L1 LINE L1 4312 4837 -1309 1047 197 33 44 chr2 1535632 1535753 -249152101 - MLT1C LTR MaLR -3 464 343 1970 128 60 28 chr2 1535753 1536106 -249151748 + THE1B LTR MaLR 1 364 0 1047 197 33 44 chr2 1536106 1536258 -249151596 - MLT1C LTR MaLR -124 343 194 434 209 62 16 chr2 1536274 1536323 -249151531 - MLT1C LTR MaLR -332 135 90 1253 191 38 107 chr2 1536323 1536715 -249151139 + MLT1A1 LTR MaLR 1 365 0 434 209 62 16 chr2 1536715 1536794 -249151060 - MLT1C LTR MaLR -377 90 1 182 387 84 0 chr2 1537597 1537716 -249150138 - L3 LINE CR1 -101 1476 1348 183 129 0 0 chr2 1537983 1538014 -249149840 + (TG)n Simple_repeat Simple_repeat 2 32 0 314 255 113 19 chr2 1538323 1538429 -249149425 - MER63A DNA MER1_type -3 207 92 189 325 45 57 chr2 1538478 1538635 -249149219 - L3 LINE CR1 -523 1054 900 225 277 155 26 chr2 1538750 1538905 -249148949 - HAL1 LINE L1 0 2507 2333 1243 246 54 31 chr2 1538920 1539269 -249148585 + MLT1A2 LTR MaLR 18 374 0 2554 120 3 3 chr2 1539320 1539695 -249148159 - THE1C LTR MaLR 0 375 1 10074 121 32 7 chr2 1539695 1541236 -249146618 - THE1C-int LTR MaLR 0 1580 1 1217 134 19 14 chr2 1541236 1541452 -249146402 - THE1C LTR MaLR 0 375 159 478 321 67 30 chr2 1541453 1541721 -249146133 - HAL1 LINE L1 -1995 512 235 596 294 110 30 chr2 1541728 1542163 -249145691 - L2 LINE L2 -411 2903 2434 21 36 0 0 chr2 1543717 1543745 -249144109 + AT_rich Low_complexity Low_complexity 1 28 0 309 323 119 27 chr2 1543789 1544083 -249143771 + L1 LINE L1 4508 4828 -1318 362 251 6 0 chr2 1544771 1544950 -249142904 + CT-rich Low_complexity Low_complexity 1 180 0 1445 181 24 38 chr2 1545727 1546019 -249141835 + AluJb SINE Alu 6 293 -19 305 274 129 8 chr2 1546683 1546807 -249141047 + MIR3 SINE MIR 31 169 -39 32 43 0 0 chr2 1547501 1547547 -249140307 + AT_rich Low_complexity Low_complexity 1 46 0 492 386 58 11 chr2 1547682 1548115 -249139739 - L2 LINE L2 -2139 1175 723 209 268 24 37 chr2 1548161 1548243 -249139611 - L2 LINE L2 -1316 1998 1918 180 0 0 0 chr2 1549568 1549588 -249138266 + (T)n Simple_repeat Simple_repeat 1 20 0 279 277 193 0 chr2 1549807 1549926 -249137928 + MIR SINE MIR 86 227 -35 291 29 0 0 chr2 1549961 1549996 -249137858 + U2 snRNA snRNA 1 35 -153 757 221 16 5 chr2 1550718 1550908 -249136946 - MLT1A2 LTR MaLR -2 372 181 2149 96 4 0 chr2 1550932 1551204 -249136650 - AluY SINE Alu -13 298 26 497 191 133 0 chr2 1551355 1551460 -249136394 - MLT1A2 LTR MaLR -255 119 1 496 250 114 5 chr2 1552744 1552964 -249134890 - LTR50 LTR ERVL 0 795 552 1088 90 13 0 chr2 1552967 1553123 -249134731 + LTR19A LTR ERV1 288 445 -41 216 86 0 0 chr2 1553124 1553159 -249134695 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 379 246 210 6 chr2 1553241 1553401 -249134453 - LTR50 LTR ERVL -330 465 272 1223 243 144 68 chr2 1553401 1553805 -249134049 + MLT1F1 LTR MaLR 1 456 -111 2746 168 10 12 chr2 1553805 1554292 -249133562 - MER66B LTR ERV1 0 486 1 1223 243 144 68 chr2 1554292 1554414 -249133440 + MLT1F1 LTR MaLR 456 567 0 2166 249 62 32 chr2 1555127 1556204 -249131650 - L1M4 LINE L1 -1031 5115 4007 542 244 53 22 chr2 1556233 1556458 -249131396 + L1M4 LINE L1 4417 4648 -1498 200 139 13 114 chr2 1556741 1556820 -249131034 + A-rich Low_complexity Low_complexity 3 73 0 1605 274 76 32 chr2 1557543 1558410 -249129444 - L1ME3A LINE L1 -10 6160 5258 1429 206 107 28 chr2 1558512 1558601 -249129253 + MER70A LTR ERVL 49 130 -342 1982 119 88 23 chr2 1558601 1558953 -249128901 - THE1C LTR MaLR 0 375 1 1429 206 107 28 chr2 1558953 1559256 -249128598 + MER70A LTR ERVL 130 472 0 5562 177 32 37 chr2 1559263 1560285 -249127569 - L1MB1 LINE L1 -81 6087 5062 2456 86 0 0 chr2 1560285 1560586 -249127268 + AluY SINE Alu 1 301 -10 5562 177 32 37 chr2 1560586 1561729 -249126125 - L1MB1 LINE L1 -1106 5062 3928 198 355 12 70 chr2 1562338 1562510 -249125344 - L2 LINE L2 -182 3090 2929 907 185 67 6 chr2 1562729 1562907 -249124947 - MER5A DNA MER1_type 0 189 1 396 283 83 21 chr2 1563581 1563726 -249124128 + MIR SINE MIR 72 225 -37 1902 157 10 3 chr2 1563893 1564199 -249123655 - AluSx SINE Alu -4 308 1 237 246 79 44 chr2 1565513 1565627 -249122227 - MIR SINE MIR -5 257 140 198 301 14 27 chr2 1565670 1565743 -249122111 - MIR SINE MIR -121 141 70 21 0 0 0 chr2 1566219 1566240 -249121614 + AT_rich Low_complexity Low_complexity 1 21 0 277 260 85 8 chr2 1566390 1566509 -249121345 + MIR SINE MIR 57 186 -68 189 260 31 94 chr2 1568459 1568555 -249119299 - L2 LINE L2 -242 3030 2941 1142 258 35 29 chr2 1569173 1569549 -249118305 - L1ME3A LINE L1 -197 5973 5596 337 219 27 0 chr2 1569543 1569616 -249118238 + L1ME LINE L1 5573 5647 -519 * 1978 114 92 33 chr2 1569653 1570013 -249117841 - MSTA LTR MaLR -47 381 1 357 64 0 0 chr2 1570013 1570060 -249117794 + L1ME LINE L1 5643 5689 -477 784 344 61 44 chr2 1570060 1570198 -249117656 - L1MEc LINE L1 -4827 1569 1435 2421 117 17 6 chr2 1570198 1570558 -249117296 - THE1B LTR MaLR 0 364 1 784 344 61 44 chr2 1570558 1571174 -249116680 - L1MEc LINE L1 -4961 1435 802 219 277 91 130 chr2 1572176 1572584 -249115270 + L3 LINE CR1 1083 1474 -103 199 154 19 19 chr2 1573219 1573271 -249114583 + (TAA)n Simple_repeat Simple_repeat 3 54 0 287 340 47 0 chr2 1573363 1573469 -249114385 - MIR SINE MIR -67 141 31 196 269 156 54 chr2 1574491 1574677 -249113177 - MIR SINE MIR -26 236 32 214 403 8 8 chr2 1575139 1575263 -249112591 + MIR SINE MIR 25 148 -114 593 88 0 0 chr2 1576316 1576396 -249111458 + MADE1 DNA Mariner 1 80 0 230 200 0 33 chr2 1577774 1577834 -249110020 - L1MC4 LINE L1 -1339 6703 6646 1815 254 106 89 chr2 1578341 1579500 -249108354 + MER69B DNA AcHobo 8 1186 -40 878 286 119 11 chr2 1579641 1580018 -249107836 - LTR16C LTR ERVL 0 491 74 22 0 0 0 chr2 1580890 1580912 -249106942 + AT_rich Low_complexity Low_complexity 1 22 0 5058 41 3 3 chr2 1581257 1581872 -249105982 - L1PA5 LINE L1 -1 6153 5539 1005 67 0 7 chr2 1581872 1582007 -249105847 + L1P LINE L1 2221 2354 -3792 240 330 52 10 chr2 1582156 1582253 -249105601 + L2 LINE L2 3172 3272 0 198 0 0 0 chr2 1583005 1583027 -249104827 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 2319 105 13 0 chr2 1583336 1583641 -249104213 + AluSx SINE Alu 1 309 -3 378 146 31 52 chr2 1585390 1585486 -249102368 - MLT1K LTR MaLR -4 584 491 4657 219 38 36 chr2 1585507 1586728 -249101126 + L1PA16 LINE L1 4124 5346 -800 3548 29 0 0 chr2 1586724 1587138 -249100716 + L1PA5 LINE L1 5611 6024 -130 * 2738 166 144 11 chr2 1587242 1587798 -249100056 + L1PA16 LINE L1 5535 6164 -2 243 304 14 0 chr2 1588024 1588093 -249099761 - MLT1K LTR MaLR -387 201 132 2766 204 76 40 chr2 1588595 1589481 -249098373 - L1MDa LINE L1 -4018 2522 1605 914 317 3 26 chr2 1589520 1589861 -249097993 - L1MDa LINE L1 -6145 395 63 207 366 41 24 chr2 1590290 1590413 -249097441 + MIR SINE MIR 20 144 -118 33 43 0 0 chr2 1592370 1592417 -249095437 + AT_rich Low_complexity Low_complexity 1 47 0 232 97 56 14 chr2 1592440 1592512 -249095342 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 25 0 0 0 chr2 1592532 1592557 -249095297 + AT_rich Low_complexity Low_complexity 1 25 0 347 120 57 34 chr2 1592564 1592739 -249095115 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 41 36 0 0 chr2 1592748 1592803 -249095051 + AT_rich Low_complexity Low_complexity 1 55 0 1499 251 101 25 chr2 1593447 1594323 -249093531 - Charlie2a DNA MER1_type -1252 1610 632 2071 113 0 0 chr2 1594702 1595058 -249092796 + AluSx SINE Alu 1 356 0 1500 140 61 0 chr2 1595317 1595581 -249092273 - L1PA15 LINE L1 -6 6159 5880 276 111 0 0 chr2 1597277 1597322 -249090532 + (TG)n Simple_repeat Simple_repeat 1 45 0 217 303 118 17 chr2 1600349 1600468 -249087386 + MIR SINE MIR 21 151 -57 251 338 23 15 chr2 1600562 1600695 -249087159 + MIR SINE MIR 21 154 -108 286 292 15 8 chr2 1600841 1600971 -249086883 + (TA)n Simple_repeat Simple_repeat 2 132 0 27 81 0 0 chr2 1601721 1601783 -249086071 + AT_rich Low_complexity Low_complexity 1 62 0 486 288 22 84 chr2 1602819 1603045 -249084809 + MIR SINE MIR 30 241 -21 12816 214 64 26 chr2 1604605 1607283 -249080571 - L1MA8 LINE L1 -6 7245 4670 2144 101 7 3 chr2 1607283 1607615 -249080239 + AluSx SINE Alu 1 333 0 12816 214 64 26 chr2 1607615 1608119 -249079735 - L1MA8 LINE L1 -2581 4670 4186 231 36 0 0 chr2 1608119 1608147 -249079707 + (CA)n Simple_repeat Simple_repeat 2 29 0 12816 214 64 26 chr2 1608147 1609189 -249078665 - L1MA8 LINE L1 -3065 4186 3185 1516 189 11 25 chr2 1609189 1609474 -249078380 + AluJo SINE Alu 1 281 -31 297 0 0 0 chr2 1609482 1609515 -249078339 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 12816 214 64 26 chr2 1609515 1610749 -249077105 - L1MA8 LINE L1 -4072 3179 1782 2269 110 3 0 chr2 1610749 1611058 -249076796 - AluSg SINE Alu 0 310 1 12816 214 64 26 chr2 1611058 1611809 -249076045 - L1MA8 LINE L1 -5469 1782 1061 31 26 0 0 chr2 1612272 1612310 -249075544 + AT_rich Low_complexity Low_complexity 1 38 0 319 333 60 20 chr2 1613055 1613205 -249074649 - MIR SINE MIR -88 174 19 1352 287 100 22 chr2 1614855 1615357 -249072497 + MLT1F LTR MaLR 1 541 -1 1639 158 55 7 chr2 1615482 1615754 -249072100 + LTR32 LTR ERVL 21 305 -166 25 75 0 0 chr2 1615965 1616018 -249071836 + AT_rich Low_complexity Low_complexity 1 53 0 216 182 0 0 chr2 1616222 1616266 -249071588 + CT-rich Low_complexity Low_complexity 1 44 0 189 196 0 0 chr2 1616271 1616317 -249071537 + (TCCA)n Simple_repeat Simple_repeat 3 48 0 1744 198 78 16 chr2 1616469 1616852 -249071002 + MLT2C2 LTR ERVL 1 407 -57 509 145 0 0 chr2 1616894 1616970 -249070884 + HSMAR2 DNA Mariner 645 720 -582 1612 166 39 65 chr2 1616970 1617355 -249070499 - THE1C LTR MaLR 0 375 1 7002 194 115 4 chr2 1617355 1618839 -249069015 - THE1C-int LTR MaLR 0 1651 3 944 157 6 18 chr2 1618842 1619008 -249068846 - THE1C LTR MaLR -4 371 208 1370 214 25 4 chr2 1619008 1619288 -249068566 - MER101B-int LTR ERV1 -6045 286 1 249 223 43 75 chr2 1619942 1620036 -249067818 - MER101B LTR ERV1 -9 561 471 1140 165 38 104 chr2 1620137 1620453 -249067401 - MER101B LTR ERV1 -275 295 1 1846 143 49 0 chr2 1620500 1620787 -249067067 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr2 1620939 1620961 -249066893 + AT_rich Low_complexity Low_complexity 1 22 0 4859 152 19 14 chr2 1620965 1621795 -249066059 - L1PA16 LINE L1 -7 6159 5326 2782 205 8 2 chr2 1621798 1622393 -249065461 + L1P LINE L1 4698 5296 -858 21 82 0 0 chr2 1622393 1622442 -249065412 + AT_rich Low_complexity Low_complexity 1 49 0 184 344 11 44 chr2 1622623 1622713 -249065141 - L2 LINE L2 0 3272 3186 2377 100 0 0 chr2 1624661 1624962 -249062892 + AluSx SINE Alu 1 301 -11 43 76 0 0 chr2 1625028 1625120 -249062734 + AT_rich Low_complexity Low_complexity 1 92 0 308 173 73 100 chr2 1625294 1625404 -249062450 - MLT1F LTR MaLR -433 109 3 2744 132 144 33 chr2 1625594 1626134 -249061720 + MER4A LTR ERV1 1 600 0 29 28 0 0 chr2 1626304 1626340 -249061514 + AT_rich Low_complexity Low_complexity 1 36 0 1061 274 79 48 chr2 1626593 1627474 -249060380 - L1ME3 LINE L1 -2 6160 5239 33 25 0 0 chr2 1627564 1627604 -249060250 + AT_rich Low_complexity Low_complexity 1 40 0 11190 179 25 27 chr2 1627607 1627742 -249060112 - L1MA4 LINE L1 -24 7695 7561 1061 104 31 0 chr2 1627742 1627905 -249059949 - L1PA10 LINE L1 -2 6166 5999 11190 179 25 27 chr2 1627905 1628302 -249059552 - L1MA4 LINE L1 -158 7561 7164 2375 81 0 7 chr2 1628302 1628611 -249059243 - AluY SINE Alu -3 308 2 11190 179 25 27 chr2 1628611 1631368 -249056486 - L1MA4 LINE L1 -555 7164 4422 1532 178 79 34 chr2 1631371 1631782 -249056072 + THE1C LTR MaLR 1 375 0 985 198 18 0 chr2 1631782 1631999 -249055855 - L1MA4 LINE L1 -3142 4423 4203 1195 175 123 26 chr2 1631999 1632262 -249055592 - MSTA LTR MaLR 0 428 140 1697 102 159 8 chr2 1632262 1632603 -249055251 - LTR7 LTR ERV1 0 450 1 688 200 0 0 chr2 1632607 1632732 -249055122 - MSTA LTR MaLR -301 125 1 7518 213 49 5 chr2 1632734 1634309 -249053545 - MSTB-int LTR MaLR -5 1646 3 1921 189 83 8 chr2 1634311 1634707 -249053147 - MSTB LTR MaLR 0 426 1 8868 199 41 55 chr2 1634707 1635885 -249051969 - L1MA4 LINE L1 -3358 4207 3013 1584 188 3 20 chr2 1635885 1636178 -249051676 - AluJb SINE Alu -24 288 1 8868 199 41 55 chr2 1636178 1636376 -249051478 - L1MA4 LINE L1 -4552 3013 2814 279 0 0 0 chr2 1636376 1636407 -249051447 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8868 199 41 55 chr2 1636407 1638599 -249049255 - L1MA4 LINE L1 -4751 2814 12 1056 257 107 59 chr2 1638684 1639623 -249048231 - L1M4 LINE L1 -1053 5093 4110 320 242 33 33 chr2 1639686 1639777 -249048077 - L1MC4 LINE L1 -479 7563 7473 1316 285 79 31 chr2 1639993 1640909 -249046945 - L1M4 LINE L1 -1264 4951 3992 457 276 84 54 chr2 1640957 1641483 -249046371 - L1MEc LINE L1 -3630 2585 2086 21 0 0 0 chr2 1641729 1641750 -249046104 + AT_rich Low_complexity Low_complexity 1 21 0 1900 166 7 0 chr2 1642013 1642314 -249045540 + AluSx SINE Alu 1 303 -9 2123 119 3 19 chr2 1642450 1642761 -249045093 - AluSx SINE Alu -6 306 1 194 0 39 0 chr2 1643075 1643101 -249044753 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1680 231 44 20 chr2 1643215 1643666 -249044188 + MLT1C LTR MaLR 6 467 0 697 302 91 28 chr2 1644231 1644516 -249043338 + MLT1H1 LTR MaLR 1 303 -252 514 228 37 29 chr2 1644578 1644714 -249043140 + MER58B DNA MER1_type 204 340 -1 359 233 95 9 chr2 1644803 1644925 -249042929 + MLT1H1 LTR MaLR 433 554 -1 667 292 56 9 chr2 1645144 1645360 -249042494 - MIR SINE MIR -23 239 14 351 0 0 0 chr2 1645711 1645750 -249042104 + (TA)n Simple_repeat Simple_repeat 1 39 0 857 315 113 5 chr2 1645786 1646167 -249041687 - MER70B LTR ERVL -153 425 4 187 280 70 50 chr2 1647505 1647605 -249040249 + MIR SINE MIR 28 129 -133 2326 88 0 23 chr2 1647664 1647972 -249039882 + AluSx SINE Alu 1 301 -11 510 31 0 0 chr2 1648282 1648346 -249039508 + (TG)n Simple_repeat Simple_repeat 1 64 0 28 48 0 0 chr2 1648628 1648670 -249039184 + AT_rich Low_complexity Low_complexity 1 42 0 270 0 0 0 chr2 1649046 1649076 -249038778 + (TG)n Simple_repeat Simple_repeat 1 30 0 1526 171 45 48 chr2 1649210 1649520 -249038334 - AluJo SINE Alu -3 309 1 1881 221 97 34 chr2 1649665 1650250 -249037604 + MLT1E3 LTR MaLR 3 624 0 338 271 123 43 chr2 1651485 1651810 -249036044 - L1ME4a LINE L1 -106 6015 5665 2314 104 0 3 chr2 1652183 1652492 -249035362 - AluSc SINE Alu -1 308 1 399 184 0 0 chr2 1652551 1652638 -249035216 + CT-rich Low_complexity Low_complexity 4 90 0 1076 128 0 6 chr2 1652761 1652883 -249034971 + (TTC)n Simple_repeat Simple_repeat 1 300 0 1076 128 0 6 chr2 1652883 1653063 -249034791 + (TTC)n Simple_repeat Simple_repeat 1 179 0 911 171 23 27 chr2 1653275 1653484 -249034370 - L1PA8 LINE L1 -13 6142 5937 1716 154 3 43 chr2 1653484 1653783 -249034071 + Tigger4(Zombi) DNA MER2_type 1215 1501 -1230 4478 59 10 0 chr2 1653783 1654360 -249033494 - L1PA8A LINE L1 -186 5945 5363 442 200 45 18 chr2 1654790 1654900 -249032954 - LTR37B LTR ERV1 -159 309 197 449 326 20 31 chr2 1655392 1655588 -249032266 - MER63A DNA MER1_type -16 194 1 189 302 48 56 chr2 1655697 1655823 -249032031 - MER5A DNA MER1_type -35 154 30 * 235 286 0 0 chr2 1655780 1655836 -249032018 + MER5A DNA MER1_type 128 183 -6 315 71 0 0 chr2 1656299 1656341 -249031513 + (TG)n Simple_repeat Simple_repeat 2 43 0 185 35 69 0 chr2 1657579 1657608 -249030246 + A-rich Low_complexity Low_complexity 2 32 0 480 48 0 0 chr2 1658482 1658545 -249029309 + (TG)n Simple_repeat Simple_repeat 2 64 0 21 71 0 0 chr2 1659433 1659475 -249028379 + AT_rich Low_complexity Low_complexity 1 42 0 2582 27 7 3 chr2 1661257 1661558 -249026296 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 1661614 1661653 -249026201 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr2 1662193 1662230 -249025624 + AT_rich Low_complexity Low_complexity 1 37 0 1357 197 63 20 chr2 1662928 1663227 -249024627 - AluJb SINE Alu 0 312 1 285 242 34 22 chr2 1663410 1663470 -249024384 + (TA)n Simple_repeat Simple_repeat 1 59 -121 1260 149 10 0 chr2 1663470 1663678 -249024176 + MER6B DNA MER2_type 1 210 0 285 242 34 22 chr2 1663678 1663795 -249024059 + (TA)n Simple_repeat Simple_repeat 59 180 0 238 266 50 65 chr2 1663803 1663942 -249023912 - L1ME1 LINE L1 -102 6064 5928 256 331 87 29 chr2 1663944 1664116 -249023738 + L2 LINE L2 1773 1954 -1360 270 390 89 46 chr2 1664159 1664441 -249023413 + L2 LINE L2 2948 3241 -31 21 36 0 0 chr2 1665005 1665033 -249022821 + AT_rich Low_complexity Low_complexity 1 28 0 1125 230 71 43 chr2 1665868 1666289 -249021565 + MLT1D LTR MaLR 1 433 -72 184 316 51 0 chr2 1666323 1666402 -249021452 + MIR3 SINE MIR 83 165 -43 180 322 17 17 chr2 1666430 1666489 -249021365 - L2 LINE L2 -4 3309 3251 255 79 0 0 chr2 1666809 1666847 -249021007 + (TG)n Simple_repeat Simple_repeat 2 39 0 25 0 0 0 chr2 1667082 1667107 -249020747 + AT_rich Low_complexity Low_complexity 1 25 0 340 332 118 16 chr2 1667176 1667549 -249020305 + MLT1L LTR MaLR 131 541 -74 1084 269 274 18 chr2 1668029 1668851 -249019003 - L1MC4 LINE L1 -205 7837 6806 378 230 18 9 chr2 1668856 1668969 -249018885 - L1MA4 LINE L1 -209 6091 5978 * 655 249 54 80 chr2 1668961 1669334 -249018520 - L1MC4 LINE L1 -1222 6820 6458 203 286 22 0 chr2 1670219 1670310 -249017544 + (TG)n Simple_repeat Simple_repeat 1 93 0 1001 127 0 6 chr2 1670511 1670573 -249017281 + (GGA)n Simple_repeat Simple_repeat 1 241 0 1001 127 0 6 chr2 1670573 1670754 -249017100 + (GGA)n Simple_repeat Simple_repeat 1 180 0 211 339 97 0 chr2 1671520 1671644 -249016210 - L2 LINE L2 -9 3304 3169 260 26 128 0 chr2 1671765 1671843 -249016011 + (TA)n Simple_repeat Simple_repeat 1 88 0 200 132 0 26 chr2 1672213 1672251 -249015603 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 1873 166 27 48 chr2 1673227 1673787 -249014067 - MLT2A2 LTR ERVL 0 554 1 219 263 100 25 chr2 1673866 1673946 -249013908 - MIR SINE MIR -73 189 104 1462 196 85 24 chr2 1674278 1674619 -249013235 + MLT1A1 LTR MaLR 4 365 0 25 51 0 0 chr2 1675150 1675189 -249012665 + AT_rich Low_complexity Low_complexity 1 39 0 210 319 69 0 chr2 1675868 1675940 -249011914 + L2 LINE L2 2413 2489 -825 241 333 32 51 chr2 1676517 1676673 -249011181 + L2 LINE L2 2686 2838 -476 2220 133 30 25 chr2 1676907 1677269 -249010585 + THE1B LTR MaLR 1 364 0 259 355 44 24 chr2 1678608 1678827 -249009027 - MIR SINE MIR -26 236 17 1749 189 97 8 chr2 1678874 1679265 -249008589 - MSTA LTR MaLR 0 428 3 6613 203 107 15 chr2 1679267 1680779 -249007075 - MSTB-int LTR MaLR 0 1651 1 1949 194 65 5 chr2 1680779 1681181 -249006673 - MSTB LTR MaLR 0 426 1 1033 260 97 26 chr2 1681230 1681727 -249006127 - LTR10B LTR ERV1 0 547 16 2806 98 51 5 chr2 1682263 1682691 -249005163 + MLT2A2 LTR ERVL 1 448 -5 10254 109 4 12 chr2 1682694 1683063 -249004791 + THE1B-int LTR MaLR 5 375 -1205 1804 136 0 0 chr2 1683063 1683314 -249004540 - AluSc SINE Alu -9 300 50 10254 109 4 12 chr2 1683314 1684471 -249003383 + THE1B-int LTR MaLR 375 1519 -61 3097 99 18 14 chr2 1684472 1684914 -249002940 - MLT2A1 LTR ERVL 0 444 1 40172 87 10 2 chr2 1684915 1685348 -249002506 - HERVL-A1 LTR ERVL -1 5653 5225 236 53 26 0 chr2 1685348 1685386 -249002468 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 40172 87 10 2 chr2 1685386 1690562 -248997292 - HERVL-A1 LTR ERVL -429 5225 1 3095 101 9 11 chr2 1690562 1691007 -248996847 - MLT2A1 LTR ERVL 0 444 1 448 77 0 0 chr2 1691007 1691072 -248996782 + THE1B-int LTR MaLR 1516 1580 0 2088 132 51 28 chr2 1691072 1691428 -248996426 + THE1B LTR MaLR 1 364 0 255 287 77 56 chr2 1692355 1692498 -248995356 + MIR SINE MIR 117 262 0 24 67 0 0 chr2 1694090 1694135 -248993719 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 1694417 1694439 -248993415 + AT_rich Low_complexity Low_complexity 1 22 0 578 272 110 0 chr2 1694762 1695016 -248992838 - L1M4 LINE L1 -2804 3342 3061 228 306 52 31 chr2 1695072 1695265 -248992589 - L1M4 LINE L1 -3715 2431 2235 3624 185 13 46 chr2 1695287 1696185 -248991669 - L1MB3 LINE L1 -2 6181 5313 * 3664 218 63 46 chr2 1696184 1697296 -248990558 - L1MC3 LINE L1 -743 5403 5096 1869 179 0 10 chr2 1697296 1697609 -248990245 + AluJb SINE Alu 3 312 0 3664 218 63 46 chr2 1697609 1698411 -248989443 - L1MC3 LINE L1 -1050 5096 4309 1291 232 57 21 chr2 1698423 1698897 -248988957 - L1MC3 LINE L1 -2042 4104 3614 2207 85 4 0 chr2 1699003 1699329 -248988525 + AluY SINE Alu 1 327 0 376 309 49 19 chr2 1699337 1699499 -248988355 + MER5B DNA MER1_type 1 167 -11 2158 176 39 28 chr2 1701683 1702143 -248985711 + MLT1C LTR MaLR 1 465 -2 2345 244 64 26 chr2 1702359 1703228 -248984626 + L1ME2 LINE L1 5254 6155 -9 323 256 57 81 chr2 1703257 1703468 -248984386 + L1MC4 LINE L1 7829 8034 -8 491 231 144 5 chr2 1704339 1704534 -248983320 - L1MA9 LINE L1 -38 6274 6053 234 310 0 0 chr2 1705978 1706049 -248981805 + MLT1J LTR MaLR 229 299 -212 238 234 85 0 chr2 1706974 1707068 -248980786 + LTR33A LTR ERVL 408 509 -14 272 356 34 0 chr2 1708865 1708983 -248978871 + MIR SINE MIR 138 259 -3 1975 121 32 0 chr2 1709018 1709299 -248978555 - AluSc SINE Alu -4 305 16 250 340 19 19 chr2 1710669 1710775 -248977079 - MIR3 SINE MIR -88 120 15 259 364 93 0 chr2 1711030 1711170 -248976684 + MIR SINE MIR 108 260 -2 529 363 28 4 chr2 1711187 1711438 -248976416 - MIR SINE MIR 0 262 6 1526 273 99 56 chr2 1711902 1712761 -248975093 + L2 LINE L2 2153 3036 -277 1419 172 23 15 chr2 1712776 1713038 -248974816 - AluJb SINE Alu -48 264 1 628 238 166 14 chr2 1713242 1713465 -248974389 + MER69 DNA AcHobo 275 531 -695 543 265 99 7 chr2 1713575 1713726 -248974128 - MIR SINE MIR -89 173 9 296 291 72 11 chr2 1713818 1713978 -248973876 - MIR SINE MIR -63 199 32 243 133 0 0 chr2 1714893 1714938 -248972916 + (CAT)n Simple_repeat Simple_repeat 3 47 0 303 330 61 0 chr2 1717892 1718007 -248969847 - L2 LINE L2 -9 3263 3142 1634 136 42 33 chr2 1718918 1719440 -248968414 + MER50 LTR ERV1 1 729 -5 254 255 49 39 chr2 1721654 1721756 -248966098 - MIR SINE MIR -56 206 104 2117 174 58 7 chr2 1721831 1722278 -248965576 + L1MC2 LINE L1 5850 6319 -25 26 50 0 0 chr2 1722616 1722656 -248965198 + AT_rich Low_complexity Low_complexity 1 40 0 479 307 131 27 chr2 1723451 1723862 -248963992 + L1MCc LINE L1 799 1252 -5171 402 174 35 0 chr2 1723886 1723972 -248963882 + L1MCc LINE L1 2318 2657 -4285 986 273 96 25 chr2 1723977 1724933 -248962921 + L1ME1 LINE L1 1729 2697 -3518 565 241 12 48 chr2 1724933 1725099 -248962755 - FRAM SINE Alu -6 160 1 994 241 113 12 chr2 1725100 1725597 -248962257 + L1ME1 LINE L1 2916 3462 -2753 849 262 53 37 chr2 1725627 1726058 -248961796 + L1ME1 LINE L1 4143 4580 -1635 935 260 138 28 chr2 1726112 1726637 -248961217 + L1ME1 LINE L1 5327 5895 -340 237 33 0 0 chr2 1726652 1726682 -248961172 + (TA)n Simple_repeat Simple_repeat 2 31 0 530 269 54 16 chr2 1726836 1727022 -248960832 + L1ME1 LINE L1 5989 6181 -54 2291 105 3 0 chr2 1727075 1727381 -248960473 - AluSq SINE Alu -6 307 1 446 186 0 10 chr2 1728425 1728522 -248959332 + GA-rich Low_complexity Low_complexity 2 97 0 1460 196 49 63 chr2 1730538 1730966 -248956888 - L1MA8 LINE L1 -93 6198 5777 248 155 103 38 chr2 1730938 1731018 -248956836 + L1MA8 LINE L1 6207 6291 0 * 24 0 0 0 chr2 1731021 1731045 -248956809 + AT_rich Low_complexity Low_complexity 1 24 0 207 228 0 51 chr2 1731629 1731708 -248956146 + T-rich Low_complexity Low_complexity 1 75 0 225 213 0 0 chr2 1732375 1732422 -248955432 + LTR67 LTR ERVL 509 555 -2 252 0 0 0 chr2 1732794 1732822 -248955032 + (TG)n Simple_repeat Simple_repeat 1 28 0 514 268 205 0 chr2 1734102 1734307 -248953547 - MIR SINE MIR -1 261 15 560 313 131 55 chr2 1734380 1734799 -248953055 - MLT1K LTR MaLR -135 453 3 190 327 0 0 chr2 1736027 1736082 -248951772 - MIR SINE MIR -14 248 194 2198 201 13 19 chr2 1736295 1736763 -248951091 + MLT1C LTR MaLR 1 465 -2 22 0 0 0 chr2 1738733 1738755 -248949099 + AT_rich Low_complexity Low_complexity 1 22 0 560 267 56 0 chr2 1739520 1739681 -248948173 + MLT-int LTR MaLR 596 765 -970 258 215 0 0 chr2 1739727 1739792 -248948062 + MER89 LTR ERV1 30 94 -465 279 160 20 0 chr2 1739869 1739919 -248947935 - MER34 LTR ERV1 -491 51 1 252 259 62 36 chr2 1740436 1740548 -248947306 + MER117 DNA MER1_type 3 117 -80 295 322 82 14 chr2 1741399 1741691 -248946163 + L1MC3 LINE L1 3681 3992 -2154 277 257 18 9 chr2 1741715 1741828 -248946026 + (TA)n Simple_repeat Simple_repeat 1 114 0 455 264 96 44 chr2 1741869 1742119 -248945735 + L1MC3 LINE L1 4062 4324 -1822 1441 194 26 23 chr2 1742133 1742437 -248945417 - MLT1A1 LTR MaLR -7 358 54 245 263 18 0 chr2 1742437 1742494 -248945360 - MST-int LTR MaLR -540 1111 1054 2261 251 44 18 chr2 1742509 1743126 -248944728 - MLT1A1-int LTR MaLR -970 765 133 1392 143 20 29 chr2 1743126 1743295 -248944559 - MSTA LTR MaLR 0 428 260 2275 145 3 6 chr2 1743295 1743660 -248944194 + THE1B LTR MaLR 1 364 0 1392 143 20 29 chr2 1743660 1743734 -248944120 - MSTA LTR MaLR -168 260 187 886 152 20 51 chr2 1743794 1743991 -248943863 - MSTA LTR MaLR -237 191 1 765 160 15 0 chr2 1743995 1744126 -248943728 - MLT1A1-int LTR MaLR -1602 133 1 1772 174 32 12 chr2 1744127 1744467 -248943387 - MLT1A1 LTR MaLR 0 365 19 1637 210 38 0 chr2 1744942 1745289 -248942565 - MLT1A1 LTR MaLR -2 363 4 265 318 46 23 chr2 1745302 1745519 -248942335 + L1MC3 LINE L1 4379 4600 -1546 1183 261 57 46 chr2 1745674 1746362 -248941492 + L1MC3 LINE L1 5467 6146 -1664 186 43 0 0 chr2 1746362 1746385 -248941469 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1183 261 57 46 chr2 1746385 1747426 -248940428 + L1MC3 LINE L1 6146 7174 -636 1804 138 4 8 chr2 1747426 1747686 -248940168 + AluSq SINE Alu 1 259 -54 1183 261 57 46 chr2 1747686 1747699 -248940155 + L1MC3 LINE L1 7174 7185 -625 222 37 0 0 chr2 1747699 1747726 -248940128 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1183 261 57 46 chr2 1747726 1748381 -248939473 + L1MC3 LINE L1 7185 7800 -10 290 154 66 55 chr2 1748579 1748670 -248939184 + L1ME3A LINE L1 6071 6162 -8 1784 178 3 0 chr2 1748682 1748975 -248938879 + AluJb SINE Alu 3 296 -16 5143 40 11 2 chr2 1749355 1749985 -248937869 - L1PA5 LINE L1 -4 6150 5515 365 239 0 22 chr2 1750130 1750222 -248937632 + L1MC4 LINE L1 6614 6703 -1339 382 102 87 0 chr2 1750225 1750352 -248937502 + (TA)n Simple_repeat Simple_repeat 1 138 0 1496 70 4 48 chr2 1750528 1750539 -248937315 - L1PA11 LINE L1 0 6174 6164 2234 92 0 22 chr2 1750539 1750854 -248937000 - AluSp SINE Alu -2 311 4 1496 70 4 48 chr2 1750854 1751072 -248936782 - L1PA11 LINE L1 -10 6164 5955 587 153 38 0 chr2 1751661 1751780 -248936074 - MLT1D LTR MaLR 0 505 396 318 26 0 0 chr2 1752606 1752645 -248935209 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 330 21 0 chr2 1752718 1752812 -248935042 + L3 LINE CR1 790 885 -692 21 0 0 0 chr2 1753764 1753785 -248934069 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 1755088 1755113 -248932741 + AT_rich Low_complexity Low_complexity 1 25 0 252 0 0 0 chr2 1755382 1755410 -248932444 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 249 180 0 0 chr2 1755787 1755837 -248932017 + GA-rich Low_complexity Low_complexity 3 52 0 25 0 0 0 chr2 1756136 1756161 -248931693 + AT_rich Low_complexity Low_complexity 1 25 0 198 297 103 32 chr2 1757156 1757311 -248930543 + MIR SINE MIR 47 212 -50 234 0 0 0 chr2 1758775 1758801 -248929053 + (TG)n Simple_repeat Simple_repeat 1 26 0 251 263 13 40 chr2 1758807 1758883 -248928971 - MIR SINE MIR -115 147 74 443 296 100 71 chr2 1758933 1759213 -248928641 - L2 LINE L2 0 3313 3026 1387 253 31 14 chr2 1759563 1759986 -248927868 + MER63B DNA MER1_type 7 436 0 1508 43 5 0 chr2 1762358 1762546 -248925308 - AluY SINE Alu -4 307 119 29 0 0 0 chr2 1762656 1762685 -248925169 + AT_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr2 1763241 1763295 -248924559 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr2 1763317 1763345 -248924509 + AT_rich Low_complexity Low_complexity 1 28 0 191 402 12 12 chr2 1763437 1763519 -248924335 - MIR SINE MIR -161 101 20 3211 210 94 25 chr2 1763649 1764435 -248923419 - MER21B LTR ERV1 -11 852 13 193 320 154 0 chr2 1764439 1764517 -248923337 + L2 LINE L2 3164 3253 -19 3497 111 83 12 chr2 1764776 1765369 -248922485 - LTR24C LTR ERV1 0 635 1 5036 126 29 21 chr2 1765637 1766500 -248921354 - MER4D LTR ERV1 -2 870 1 2574 58 0 0 chr2 1766534 1766845 -248921009 + AluY SINE Alu 1 311 0 1404 277 25 11 chr2 1766911 1767355 -248920499 + Charlie1a DNA MER1_type 1 450 -1005 450 286 19 33 chr2 1767355 1767565 -248920289 + L1ME LINE L1 4574 4780 -1366 2904 143 24 24 chr2 1767597 1767717 -248920137 - MLT2A1 LTR ERVL 0 515 396 279 0 0 0 chr2 1767717 1767748 -248920106 + (TA)n Simple_repeat Simple_repeat 1 31 0 2904 143 24 24 chr2 1767748 1768134 -248919720 - MLT2A1 LTR ERVL -119 396 1 922 249 46 92 chr2 1768138 1768487 -248919367 - MLT1A2 LTR MaLR -21 353 21 904 178 51 0 chr2 1768505 1768662 -248919192 - MER72 LTR ERV1 -557 165 1 373 345 65 50 chr2 1768662 1768984 -248918870 + L1ME LINE L1 4966 5292 -854 240 254 17 0 chr2 1769041 1769100 -248918754 + GA-rich Low_complexity Low_complexity 1 60 0 297 341 75 26 chr2 1769139 1769523 -248918331 + L1ME LINE L1 5457 5859 -311 340 104 0 0 chr2 1769626 1769674 -248918180 - AluY SINE Alu -219 82 35 764 189 7 0 chr2 1769697 1769848 -248918006 - MLT1A2 LTR MaLR 0 390 237 182 387 32 8 chr2 1769962 1770086 -248917768 + MIR3 SINE MIR 14 140 -68 29 28 0 0 chr2 1770668 1770704 -248917150 + AT_rich Low_complexity Low_complexity 1 36 0 183 80 0 0 chr2 1770985 1771010 -248916844 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 363 271 66 36 chr2 1771031 1771197 -248916657 - L1ME LINE L1 -382 5739 5569 208 287 278 9 chr2 1771276 1771391 -248916463 + MER5A DNA MER1_type 44 189 0 346 303 10 0 chr2 1772079 1772178 -248915676 - MER5A DNA MER1_type -80 109 10 234 281 70 126 chr2 1772344 1772543 -248915311 + MIR SINE MIR 3 190 -72 2023 138 7 0 chr2 1774032 1774330 -248913524 + AluSx SINE Alu 2 301 -11 1870 118 47 4 chr2 1774808 1775087 -248912767 + AluSx SINE Alu 1 291 -21 464 254 114 55 chr2 1775104 1775162 -248912692 - MIR SINE MIR -2 260 207 252 86 0 0 chr2 1775162 1775197 -248912657 + (CA)n Simple_repeat Simple_repeat 2 36 0 464 254 114 55 chr2 1775197 1775374 -248912480 - MIR SINE MIR -55 207 11 28 0 0 0 chr2 1776512 1776540 -248911314 + AT_rich Low_complexity Low_complexity 1 28 0 185 298 48 0 chr2 1776696 1776780 -248911074 - L2 LINE L2 -2882 432 345 2272 256 44 50 chr2 1777381 1778039 -248909815 - L1MD3 LINE L1 -13 8400 7769 2812 6 0 10 chr2 1778039 1778352 -248909502 + AluY SINE Alu 1 310 -1 2272 256 44 50 chr2 1778352 1778540 -248909314 - L1MD3 LINE L1 -644 7769 7581 3351 138 27 0 chr2 1778543 1779265 -248908589 + L1P5 LINE L1 5053 5791 -360 219 114 0 0 chr2 1779271 1779306 -248908548 + (TA)n Simple_repeat Simple_repeat 2 36 0 263 104 0 21 chr2 1779309 1779357 -248908497 + L1P5 LINE L1 5784 5830 -321 2510 115 0 0 chr2 1779506 1779870 -248907984 + L1PB1 LINE L1 5788 6151 0 4379 248 75 43 chr2 1779877 1780002 -248907852 - L1MD3 LINE L1 -757 5807 5687 1382 213 10 30 chr2 1780002 1780298 -248907556 - AluJb SINE Alu -22 290 1 4379 248 75 43 chr2 1780298 1781601 -248906253 - L1MD3 LINE L1 -877 5687 6055 966 8 24 0 chr2 1781601 1781724 -248906130 + (TCTA)n Simple_repeat Simple_repeat 3 128 0 4379 248 75 43 chr2 1781724 1782451 -248905403 - L1MD3 LINE L1 -508 6056 5354 288 214 0 0 chr2 1782451 1782507 -248905347 - L1 LINE L1 -1329 5235 5180 25 31 0 0 chr2 1782523 1782555 -248905299 + AT_rich Low_complexity Low_complexity 1 32 0 6470 141 9 9 chr2 1782559 1783997 -248903857 - L1MA3 LINE L1 -1 7723 6287 * 9724 181 23 13 chr2 1783989 1785704 -248902150 - L1MA3 LINE L1 -5821 1744 13 4693 234 39 6 chr2 1785711 1786980 -248900874 - L1 LINE L1 -1364 6201 4892 285 200 0 17 chr2 1786978 1787038 -248900816 - L1M4c LINE L1 -6320 64 6 * 1405 291 43 33 chr2 1787023 1787833 -248900021 - L1MD3 LINE L1 -2181 4383 3566 238 125 18 36 chr2 1788469 1788525 -248899329 - L1MCc LINE L1 -6105 318 264 340 283 25 69 chr2 1788565 1788724 -248899130 - L1MD3 LINE L1 -5889 156 5 10287 90 5 16 chr2 1788969 1790745 -248897109 + L1P3 LINE L1 3875 5643 -511 298 38 0 113 chr2 1790744 1790797 -248897057 + L1PA7 LINE L1 6108 6154 0 * 391 244 41 32 chr2 1791861 1791984 -248895870 + MER5B DNA MER1_type 1 124 -54 375 23 0 0 chr2 1792109 1792153 -248895701 + (TG)n Simple_repeat Simple_repeat 1 44 0 1242 233 66 3 chr2 1792710 1793015 -248894839 + MLT1A1 LTR MaLR 1 324 -41 222 383 28 0 chr2 1793044 1793151 -248894703 + MIR SINE MIR 34 143 -65 202 307 93 21 chr2 1793346 1793486 -248894368 + L2 LINE L2 2671 2820 -494 355 333 32 43 chr2 1793532 1793718 -248894136 + MIR SINE MIR 8 191 -71 3073 223 55 43 chr2 1794199 1794889 -248892965 - L1MB5 LINE L1 -8 6166 5486 940 227 44 86 chr2 1794889 1795298 -248892556 - MSTD LTR MaLR 0 396 5 3073 223 55 43 chr2 1795298 1796305 -248891549 - L1MB5 LINE L1 -688 5486 4442 322 344 56 8 chr2 1798118 1798243 -248889611 + L2 LINE L2 3142 3272 0 312 262 76 81 chr2 1798315 1798525 -248889329 + L2 LINE L2 3101 3309 -4 453 293 6 17 chr2 1799684 1799865 -248887989 + C-rich Low_complexity Low_complexity 2 180 0 403 80 0 0 chr2 1800029 1800079 -248887775 - MER51B LTR ERV1 0 377 328 876 224 9 39 chr2 1800082 1800314 -248887540 - L1ME LINE L1 -370 6294 6070 523 272 76 31 chr2 1800320 1800544 -248887310 - MER2 DNA MER2_type -8 337 104 292 93 0 0 chr2 1800574 1800617 -248887237 + MADE1 DNA Mariner 38 80 0 486 217 47 9 chr2 1800626 1800732 -248887122 - MER2 DNA MER2_type -234 111 2 402 158 40 59 chr2 1800735 1800836 -248887018 - L1ME LINE L1 -610 6072 5974 725 141 0 8 chr2 1800836 1800964 -248886890 + (TTCC)n Simple_repeat Simple_repeat 3 129 0 3069 267 40 62 chr2 1800974 1802925 -248884929 - L1ME LINE L1 -743 5901 4067 607 291 36 40 chr2 1803009 1803484 -248884370 - L1ME LINE L1 -5195 1347 875 180 0 0 0 chr2 1803488 1803508 -248884346 + (TG)n Simple_repeat Simple_repeat 2 21 0 1923 178 15 3 chr2 1803508 1803850 -248884004 - MER7A DNA MER2_type -1 345 2 303 340 118 30 chr2 1803917 1804246 -248883608 - L1ME LINE L1 -5667 875 518 267 269 15 60 chr2 1804439 1804573 -248883281 - L1ME LINE L1 -6316 226 99 12859 160 43 11 chr2 1804827 1807171 -248880683 + Tigger1 DNA MER2_type 1 2418 0 284 326 11 42 chr2 1809061 1809201 -248878653 + MIR SINE MIR 2 139 -69 188 238 63 32 chr2 1809573 1809636 -248878218 + L3 LINE CR1 1479 1543 -34 246 280 140 11 chr2 1809661 1809754 -248878100 + L2 LINE L2 3199 3303 -10 457 139 40 0 chr2 1809984 1810085 -248877769 + (TATG)n Simple_repeat Simple_repeat 2 106 0 22 0 0 0 chr2 1810353 1810375 -248877479 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr2 1811054 1811077 -248876777 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1919 176 3 0 chr2 1811715 1812017 -248875837 - AluJb SINE Alu -9 303 1 873 103 5 43 chr2 1812454 1812639 -248875215 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 2328 97 0 3 chr2 1814364 1814673 -248873181 - AluSc SINE Alu -1 308 1 207 88 0 0 chr2 1814982 1815016 -248872838 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 233 254 0 0 chr2 1816178 1816237 -248871617 + MLT1K LTR MaLR 530 588 0 392 118 65 30 chr2 1816736 1816905 -248870949 + (TA)n Simple_repeat Simple_repeat 1 175 0 236 201 25 19 chr2 1816908 1817067 -248870787 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 3276 55 19 3 chr2 1817175 1817720 -248870134 - L1P2 LINE L1 -431 5723 5171 1333 203 103 29 chr2 1818599 1818939 -248868915 - MLT1A1 LTR MaLR 0 365 1 349 212 0 50 chr2 1819218 1819316 -248868538 - MIR SINE MIR -64 144 68 591 183 25 0 chr2 1819683 1819803 -248868051 + MER58B DNA MER1_type 219 341 0 245 321 119 8 chr2 1821346 1821480 -248866374 + L2 LINE L2 3164 3312 -1 22 0 0 0 chr2 1821489 1821511 -248866343 + AT_rich Low_complexity Low_complexity 1 22 0 2501 68 0 3 chr2 1821952 1822262 -248865592 - AluY SINE Alu -2 309 1 4168 29 0 0 chr2 1822490 1822979 -248864875 + L1PA4 LINE L1 5664 6152 -3 1804 223 10 83 chr2 1823175 1823762 -248864092 + MER52A LTR ERV1 1207 1750 -5 1438 247 5 27 chr2 1823767 1824136 -248863718 + MLT1A1 LTR MaLR 3 363 -2 428 239 0 0 chr2 1824917 1825009 -248862845 - MIR3 SINE MIR -14 194 103 353 376 65 0 chr2 1826103 1826273 -248861581 + MIR SINE MIR 9 189 -73 299 65 22 0 chr2 1826614 1826660 -248861194 + (TC)n Simple_repeat Simple_repeat 2 48 0 327 136 0 0 chr2 1826696 1826755 -248861099 + (TGGA)n Simple_repeat Simple_repeat 3 61 0 418 231 115 13 chr2 1827302 1827458 -248860396 - MLT1K LTR MaLR -32 556 385 1090 215 88 61 chr2 1827678 1827711 -248860143 - MLT2D LTR ERVL -6 408 377 297 0 0 0 chr2 1827711 1827744 -248860110 + (TG)n Simple_repeat Simple_repeat 1 33 0 1090 215 88 61 chr2 1827744 1827755 -248860099 - MLT2D LTR ERVL -37 377 368 186 43 0 0 chr2 1827755 1827778 -248860076 + (GA)n Simple_repeat Simple_repeat 2 24 0 1090 215 88 61 chr2 1827778 1828053 -248859801 - MLT2D LTR ERVL -46 368 72 1808 144 28 0 chr2 1828053 1828337 -248859517 - AluSg SINE Alu -12 298 7 1090 215 88 61 chr2 1828337 1828411 -248859443 - MLT2D LTR ERVL -342 72 2 207 139 0 0 chr2 1828523 1828559 -248859295 + (CA)n Simple_repeat Simple_repeat 2 37 0 221 237 0 13 chr2 1829205 1829281 -248858573 + GA-rich Low_complexity Low_complexity 3 77 0 233 272 224 8 chr2 1829646 1829771 -248858083 - MIR SINE MIR -11 251 100 396 0 0 0 chr2 1830188 1830232 -248857622 + (CA)n Simple_repeat Simple_repeat 2 45 0 246 136 0 0 chr2 1830847 1830891 -248856963 + (TG)n Simple_repeat Simple_repeat 1 44 0 226 250 190 40 chr2 1831743 1831843 -248856011 + L2 LINE L2 3158 3272 0 2038 127 3 0 chr2 1832059 1832363 -248855491 + AluSx SINE Alu 1 305 0 243 264 77 0 chr2 1832468 1832559 -248855295 + L1ME LINE L1 86 183 -5887 1790 262 90 43 chr2 1832696 1833784 -248854070 + L1M4 LINE L1 3696 4834 -1312 908 249 49 42 chr2 1833797 1834115 -248853739 + L1ME LINE L1 3975 4298 -1782 2612 46 0 0 chr2 1834115 1834417 -248853437 - AluY SINE Alu -9 302 1 908 249 49 42 chr2 1834417 1834527 -248853327 + L1ME LINE L1 4298 4406 -1674 337 265 90 11 chr2 1834511 1834779 -248853075 + L1ME LINE L1 4957 5245 -835 * 555 271 16 0 chr2 1834853 1835102 -248852752 + L1ME LINE L1 5259 5605 -450 1749 178 35 22 chr2 1835408 1835778 -248852076 - THE1C LTR MaLR 0 375 1 315 349 84 21 chr2 1835933 1836171 -248851683 - MIR SINE MIR -9 253 1 245 345 12 0 chr2 1836308 1836392 -248851462 - L3 LINE CR1 -346 1231 1147 24 0 0 0 chr2 1837443 1837467 -248850387 + AT_rich Low_complexity Low_complexity 1 24 0 187 240 20 20 chr2 1837806 1837856 -248849998 - MIR SINE MIR -63 199 150 6313 93 12 1 chr2 1838667 1839648 -248848206 + L1PA8 LINE L1 5175 6165 -7 240 301 108 0 chr2 1839765 1839858 -248847996 - MIR SINE MIR -35 227 125 199 317 131 7 chr2 1840086 1840231 -248847623 - MIR SINE MIR -37 225 63 33 0 0 0 chr2 1840981 1841014 -248846840 + AT_rich Low_complexity Low_complexity 1 33 0 390 42 0 0 chr2 1843998 1844046 -248843808 + (CAATT)n Simple_repeat Simple_repeat 2 49 0 40462 34 27 1 chr2 1844383 1850378 -248837476 + L1PA2 LINE L1 1 6154 -1 2187 139 0 0 chr2 1852473 1852774 -248835080 - AluSx SINE Alu -9 303 3 246 242 180 31 chr2 1853851 1853979 -248833875 - MIR SINE MIR 0 262 116 336 48 0 0 chr2 1854702 1854744 -248833110 + (TG)n Simple_repeat Simple_repeat 2 43 0 274 292 43 31 chr2 1857269 1857430 -248830424 - L1ME LINE L1 -312 5858 5696 227 272 124 50 chr2 1857436 1857638 -248830216 - LTR41 LTR ERVL -15 758 542 268 259 28 85 chr2 1857818 1858030 -248829824 - LTR41 LTR ERVL -573 200 1 307 303 18 9 chr2 1858073 1858182 -248829672 - L1ME LINE L1 -513 5651 5542 301 280 30 0 chr2 1858184 1858316 -248829538 - L1ME LINE L1 -708 5454 5319 596 254 154 50 chr2 1858351 1859125 -248828729 - L1ME LINE L1 -816 5330 4477 910 293 99 3 chr2 1859284 1859636 -248828218 + LTR53 LTR ERVL 1 386 -133 1304 204 17 3 chr2 1859647 1859941 -248827913 - L1P LINE L1 -964 5182 4885 180 26 53 26 chr2 1859947 1859985 -248827869 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1468 186 21 77 chr2 1860226 1860656 -248827198 + LTR52 LTR ERVL 13 418 -3 681 254 115 21 chr2 1860660 1860991 -248826863 - L1M4 LINE L1 -551 5633 5272 * 1081 222 50 81 chr2 1860972 1861372 -248826482 - L1M4 LINE L1 -789 5357 4973 1888 191 5 0 chr2 1861372 1861750 -248826104 - L1MB2 LINE L1 -2 6169 5790 1081 222 50 81 chr2 1861750 1861844 -248826010 - L1M4 LINE L1 -1173 4973 4878 350 273 7 56 chr2 1863061 1863204 -248824650 - L2 LINE L2 -203 3069 2934 225 397 94 21 chr2 1863247 1863481 -248824373 - L2 LINE L2 -459 2855 2605 227 287 66 37 chr2 1864116 1864252 -248823602 + MIR SINE MIR 122 261 -1 219 232 0 0 chr2 1864742 1864798 -248823056 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 1983 153 0 0 chr2 1865508 1865803 -248822051 - AluSx SINE Alu -15 297 3 380 273 105 14 chr2 1866931 1867074 -248820780 - L2 LINE L2 0 3313 3158 198 0 0 0 chr2 1867179 1867201 -248820653 + (TG)n Simple_repeat Simple_repeat 1 22 0 784 297 20 28 chr2 1867324 1867573 -248820281 - MIR SINE MIR -4 258 12 223 337 18 49 chr2 1868139 1868302 -248819552 + L2 LINE L2 2933 3090 -182 202 140 20 20 chr2 1868931 1868981 -248818873 + (TA)n Simple_repeat Simple_repeat 2 51 0 353 281 50 50 chr2 1868993 1869192 -248818662 - L1ME LINE L1 -360 5761 5563 22 88 0 0 chr2 1871567 1871624 -248816230 + AT_rich Low_complexity Low_complexity 1 57 0 330 253 53 67 chr2 1872375 1872676 -248815178 + L1MDa LINE L1 1324 1660 -5061 270 0 0 0 chr2 1872729 1872759 -248815095 + (CA)n Simple_repeat Simple_repeat 2 31 0 457 312 80 0 chr2 1873657 1873907 -248813947 + L1M4 LINE L1 1344 1613 -5246 889 247 91 51 chr2 1873930 1874359 -248813495 + L1M4 LINE L1 5633 6078 -879 821 205 12 89 chr2 1874382 1874640 -248813214 - LTR12 LTR ERV1 -239 475 238 7972 184 68 30 chr2 1875451 1877142 -248810712 + MER52A LTR ERV1 1 1755 0 207 200 0 0 chr2 1878164 1878204 -248809650 + MIR SINE MIR 185 224 -38 261 75 0 0 chr2 1878205 1878245 -248809609 + (GA)n Simple_repeat Simple_repeat 2 41 0 2325 100 3 0 chr2 1878421 1878721 -248809133 - AluSq SINE Alu -12 301 1 1755 211 0 0 chr2 1878951 1879302 -248808552 + L1P LINE L1 4410 4760 -1386 871 178 77 6 chr2 1879307 1879476 -248808378 - MLT1B LTR MaLR -202 188 8 275 274 264 0 chr2 1879566 1879672 -248808182 + L2 LINE L2 3180 3313 0 253 226 39 29 chr2 1880658 1880760 -248807094 + (CA)n Simple_repeat Simple_repeat 2 104 0 292 207 33 20 chr2 1880772 1880922 -248806932 + (CA)n Simple_repeat Simple_repeat 1 152 0 342 312 11 58 chr2 1880976 1881165 -248806689 + (CACG)n Simple_repeat Simple_repeat 1 180 0 * 442 261 6 30 chr2 1881045 1881210 -248806644 + (CA)n Simple_repeat Simple_repeat 1 161 0 319 333 0 0 chr2 1882615 1882723 -248805131 - MIR3 SINE MIR -8 200 93 235 185 15 31 chr2 1882872 1882937 -248804917 - MLT1E1 LTR MaLR -440 214 151 506 71 12 60 chr2 1882946 1883030 -248804824 - MADE1 DNA Mariner 0 80 1 378 61 0 0 chr2 1883148 1883197 -248804657 + (CA)n Simple_repeat Simple_repeat 2 50 0 403 333 15 0 chr2 1883569 1883701 -248804153 + L2 LINE L2 3136 3269 -3 584 327 118 34 chr2 1883842 1884208 -248803646 - L1MEc LINE L1 -4212 2184 1759 2242 92 0 0 chr2 1884208 1884492 -248803362 - AluSx SINE Alu -28 284 1 584 327 118 34 chr2 1884492 1884651 -248803203 - L1MEc LINE L1 -4637 1759 1615 196 393 25 16 chr2 1884924 1885046 -248802808 + MIR SINE MIR 76 198 -64 21 0 0 0 chr2 1886181 1886202 -248801652 + AT_rich Low_complexity Low_complexity 1 21 0 702 222 28 113 chr2 1886289 1886609 -248801245 + MLT1C LTR MaLR 34 326 -141 348 297 135 15 chr2 1886875 1887141 -248800713 - HAL1b LINE L1 -21 1327 1030 391 276 173 28 chr2 1887166 1887420 -248800434 - HAL1b LINE L1 -523 825 535 475 254 56 0 chr2 1887488 1887630 -248800224 - HAL1b LINE L1 -717 631 482 254 329 0 0 chr2 1887736 1887812 -248800042 + CT-rich Low_complexity Low_complexity 3 78 0 1347 238 16 53 chr2 1888041 1888378 -248799476 + MLT2D LTR ERVL 50 373 -41 330 26 0 0 chr2 1888378 1888417 -248799437 + (CA)n Simple_repeat Simple_repeat 2 40 0 1347 238 16 53 chr2 1888417 1888458 -248799396 + MLT2D LTR ERVL 373 414 0 272 325 40 32 chr2 1889964 1890090 -248797764 + MIR SINE MIR 100 226 -36 1696 200 74 32 chr2 1890108 1890488 -248797366 - MSTD LTR MaLR 0 396 1 1795 186 61 0 chr2 1890493 1890853 -248797001 + MSTC LTR MaLR 4 385 -43 1882 224 41 5 chr2 1890853 1891264 -248796590 - MSTB LTR MaLR 0 426 1 2284 199 68 11 chr2 1891272 1891744 -248796110 - MSTB-int LTR MaLR -15 1636 1138 11254 25 0 6 chr2 1891855 1894076 -248793778 + L1HS LINE L1 3951 6155 0 335 257 0 27 chr2 1894074 1894222 -248793632 + L1MC3 LINE L1 3252 3395 -2751 * 821 237 60 73 chr2 1894208 1894605 -248793249 + L1MC3 LINE L1 4877 5268 -878 3646 199 12 4 chr2 1894605 1895328 -248792526 + Tigger2 DNA MER2_type 1 729 -1989 1113 170 122 0 chr2 1895368 1895598 -248792256 + Tigger2 DNA MER2_type 2461 2718 0 9649 205 50 22 chr2 1895602 1896906 -248790948 + L1MC3 LINE L1 5271 6675 -1110 402 21 0 0 chr2 1896906 1896953 -248790901 + (TG)n Simple_repeat Simple_repeat 2 48 0 9649 205 50 22 chr2 1896953 1898080 -248789774 + L1MC3 LINE L1 6675 7769 -16 272 237 237 9 chr2 1898162 1898276 -248789578 + MIR SINE MIR 113 252 -10 253 215 152 0 chr2 1898279 1898358 -248789496 + MARNA DNA Mariner 133 223 -363 22 70 0 0 chr2 1898410 1898453 -248789401 + AT_rich Low_complexity Low_complexity 1 43 0 378 338 77 30 chr2 1898550 1898784 -248789070 + MIR SINE MIR 18 262 0 28 48 0 0 chr2 1898817 1898859 -248788995 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 1898979 1899003 -248788851 + AT_rich Low_complexity Low_complexity 1 24 0 219 88 0 0 chr2 1899859 1899893 -248787961 + (GA)n Simple_repeat Simple_repeat 1 34 0 30 0 0 0 chr2 1900477 1900507 -248787347 + AT_rich Low_complexity Low_complexity 1 30 0 1928 147 0 3 chr2 1901767 1902052 -248785802 + AluSx SINE Alu 1 284 -28 2933 202 37 7 chr2 1902192 1902787 -248785067 - MSTB-int LTR MaLR -1038 613 1 2124 181 43 17 chr2 1902787 1903202 -248784652 - MSTB LTR MaLR 0 426 1 328 71 0 0 chr2 1903202 1903244 -248784610 + MSTC LTR MaLR 381 422 -6 1551 167 30 79 chr2 1903267 1903406 -248784448 + MLT2A2 LTR ERVL 52 196 -358 2449 70 0 6 chr2 1903406 1903719 -248784135 + AluY SINE Alu 1 311 0 1551 167 30 79 chr2 1903719 1904091 -248783763 + MLT2A2 LTR ERVL 196 554 0 333 0 0 0 chr2 1906571 1906608 -248781246 + (TC)n Simple_repeat Simple_repeat 2 38 0 647 258 75 0 chr2 1906827 1907013 -248780841 + MER63A DNA MER1_type 3 202 -8 30 0 0 0 chr2 1907733 1907763 -248780091 + AT_rich Low_complexity Low_complexity 1 30 0 258 224 0 0 chr2 1908073 1908158 -248779696 + CT-rich Low_complexity Low_complexity 1 85 0 283 289 52 82 chr2 1908977 1909112 -248778742 - MIR SINE MIR -13 249 119 21 57 0 0 chr2 1909241 1909276 -248778578 + AT_rich Low_complexity Low_complexity 1 35 0 2276 123 0 0 chr2 1909681 1909989 -248777865 + AluSg SINE Alu 1 308 -2 226 220 147 37 chr2 1910079 1910188 -248777666 + MIR SINE MIR 107 227 -35 2064 127 0 3 chr2 1910936 1911236 -248776618 - AluSq SINE Alu 0 313 15 207 0 0 0 chr2 1911239 1911262 -248776592 + (T)n Simple_repeat Simple_repeat 1 23 0 182 37 37 0 chr2 1913596 1913623 -248774231 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 505 275 50 84 chr2 1913871 1914489 -248773365 - HAL1 LINE L1 -886 1621 1025 21 36 0 0 chr2 1914535 1914563 -248773291 + AT_rich Low_complexity Low_complexity 1 28 0 236 53 26 0 chr2 1915173 1915211 -248772643 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2049 70 0 77 chr2 1915214 1915514 -248772340 - AluY SINE Alu -34 277 1 2049 136 13 0 chr2 1915809 1916111 -248771743 + AluSx SINE Alu 3 308 -4 180 125 0 0 chr2 1916731 1916763 -248771091 + (CA)n Simple_repeat Simple_repeat 2 33 0 219 280 25 68 chr2 1916795 1916913 -248770941 - L2 LINE L2 -4 3309 3197 430 322 37 28 chr2 1918512 1918726 -248769128 - MIR SINE MIR -24 238 23 341 146 0 0 chr2 1919929 1919984 -248767870 + L1P5 LINE L1 5391 5445 -709 3451 55 2 0 chr2 1919993 1920427 -248767427 + L1PA5 LINE L1 5718 6152 -2 3334 188 120 5 chr2 1920438 1921206 -248766648 + L1MA8 LINE L1 5428 6283 -8 370 305 18 24 chr2 1921964 1922128 -248765726 - L1MD3 LINE L1 -5 7990 7828 330 67 317 0 chr2 1922767 1922827 -248765027 + MADE1 DNA Mariner 1 79 -1 181 278 0 0 chr2 1923402 1923438 -248764416 - L2 LINE L2 -16 3256 3221 432 248 58 7 chr2 1923520 1923657 -248764197 + L1M4 LINE L1 2436 2579 -3567 306 273 88 68 chr2 1924186 1924585 -248763269 + HAL1b LINE L1 68 474 -874 * 1846 284 89 30 chr2 1924582 1926106 -248761748 - L1MDa LINE L1 -1587 4819 3175 * 6099 218 37 14 chr2 1926102 1928158 -248759696 + L1MA4 LINE L1 4 2131 -4197 3445 83 0 0 chr2 1928158 1928602 -248759252 + MLT2A1 LTR ERVL 1 444 0 6099 218 37 14 chr2 1928602 1929244 -248758610 + L1MA4 LINE L1 2131 2756 -3572 5550 183 28 50 chr2 1929237 1930103 -248757751 + L1MA4 LINE L1 4061 4945 -1537 * 1949 117 25 3 chr2 1930103 1930463 -248757391 + AluSc SINE Alu 1 309 0 5550 183 28 50 chr2 1930463 1932018 -248755836 + L1MA4 LINE L1 4945 6425 -57 2281 87 0 3 chr2 1932018 1932305 -248755549 + AluY SINE Alu 3 288 -23 5550 183 28 50 chr2 1932305 1932356 -248755498 + L1MA4 LINE L1 6425 6476 -6 1231 266 85 23 chr2 1932391 1933053 -248754801 - L1MDa LINE L1 -3231 3175 2473 545 254 76 61 chr2 1933077 1933655 -248754199 - L1MDa LINE L1 -3984 2422 1836 307 214 0 95 chr2 1933661 1933787 -248754067 - L1MDa LINE L1 -4935 1471 1358 2084 74 0 0 chr2 1933787 1934057 -248753797 - L1PA6 LINE L1 0 6154 5885 502 308 44 54 chr2 1934094 1934591 -248753263 - L1MDa LINE L1 -5142 1267 776 2233 91 7 10 chr2 1936209 1936518 -248751336 - AluY SINE Alu -3 308 1 1390 210 35 11 chr2 1936523 1936809 -248751045 - AluJo SINE Alu -19 293 1 3923 262 64 48 chr2 1938593 1939483 -248748371 + L1MEc LINE L1 2078 2952 -3263 261 0 0 0 chr2 1939483 1939512 -248748342 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3923 262 64 48 chr2 1939512 1940845 -248747009 + L1MEc LINE L1 2952 4287 -1928 2335 278 55 43 chr2 1941207 1941321 -248746533 + L1MCb LINE L1 3 114 -5931 1528 166 50 68 chr2 1941321 1941701 -248746153 - THE1C LTR MaLR 0 375 3 2335 278 55 43 chr2 1941701 1942622 -248745232 + L1MCb LINE L1 114 1050 -4995 581 281 64 54 chr2 1942648 1943117 -248744737 + MER77 LTR ERV1 53 603 -2 271 190 25 25 chr2 1943284 1943363 -248744491 + L1MCb LINE L1 1057 1135 -5429 627 41 0 31 chr2 1943426 1943524 -248744330 + (TCTA)n Simple_repeat Simple_repeat 3 97 0 2371 249 34 35 chr2 1943549 1944638 -248743216 + L1MCb LINE L1 2384 3471 -3093 2487 42 3 10 chr2 1944638 1944945 -248742909 - AluY SINE Alu -6 305 1 2371 249 34 35 chr2 1944945 1945167 -248742687 + L1MCb LINE L1 3471 3692 -2872 31556 36 34 2 chr2 1945180 1949097 -248738757 + L1P LINE L1 1 4044 -2102 1986 116 20 10 chr2 1949197 1949490 -248738364 - AluSq SINE Alu -17 296 1 269 282 14 0 chr2 1949633 1949704 -248738150 + MIR SINE MIR 126 197 -65 329 202 23 132 chr2 1950668 1950797 -248737057 - MER5B DNA MER1_type -58 120 6 23 0 0 0 chr2 1953265 1953288 -248734566 + AT_rich Low_complexity Low_complexity 1 23 0 32 0 0 0 chr2 1953586 1953618 -248734236 + AT_rich Low_complexity Low_complexity 1 32 0 276 30 0 0 chr2 1953730 1953763 -248734091 + (TG)n Simple_repeat Simple_repeat 2 34 0 1242 218 72 50 chr2 1953802 1954164 -248733690 - MLT1A2 LTR MaLR -1 373 4 497 328 134 22 chr2 1954594 1954627 -248733227 - MLT1I LTR MaLR -2 407 379 1944 219 72 9 chr2 1954627 1955071 -248732783 - MER70A LTR ERVL 0 472 1 497 328 134 22 chr2 1955071 1955403 -248732451 - MLT1I LTR MaLR -30 379 1 453 323 111 49 chr2 1956686 1957073 -248730781 + L2 LINE L2 2504 2914 -400 367 315 49 27 chr2 1957153 1957337 -248730517 + L2 LINE L2 3122 3309 -4 23 0 0 0 chr2 1957826 1957849 -248730005 + AT_rich Low_complexity Low_complexity 1 23 0 289 322 21 10 chr2 1959216 1959318 -248728536 - MIR SINE MIR -66 142 40 189 242 145 0 chr2 1959445 1959507 -248728347 - MIR SINE MIR -105 103 33 2171 131 34 25 chr2 1959719 1960077 -248727777 - THE1B LTR MaLR -3 361 1 32 86 0 0 chr2 1960254 1960335 -248727519 + AT_rich Low_complexity Low_complexity 1 81 0 273 279 90 33 chr2 1961318 1961440 -248726414 - L2 LINE L2 -467 2847 2719 550 257 28 19 chr2 1961496 1961710 -248726144 - L1ME3 LINE L1 -2 6160 5945 339 247 12 0 chr2 1961725 1961806 -248726048 - L1ME3 LINE L1 -285 5885 5804 270 381 124 22 chr2 1961843 1962213 -248725641 - L2 LINE L2 -609 2705 2298 2893 59 0 5 chr2 1962744 1963133 -248724721 + L1PA7 LINE L1 5743 6129 -25 495 262 84 42 chr2 1963686 1963877 -248723977 - MLT1J2 LTR MaLR -251 199 1 315 0 0 0 chr2 1964236 1964271 -248723583 + (TG)n Simple_repeat Simple_repeat 2 36 0 199 133 44 0 chr2 1964325 1964370 -248723484 + CT-rich Low_complexity Low_complexity 2 48 0 2367 83 6 0 chr2 1965960 1966285 -248721569 + L1PA8 LINE L1 5843 6169 -3 2390 80 0 3 chr2 1966759 1967059 -248720795 + AluSc SINE Alu 1 299 -10 185 358 37 0 chr2 1968833 1968914 -248718940 + MIR SINE MIR 60 143 -119 474 163 0 0 chr2 1970008 1970100 -248717754 - MER53 DNA DNA -2 187 96 1809 239 38 50 chr2 1970212 1971119 -248716735 - L1M4 LINE L1 -2497 3649 2754 262 224 31 31 chr2 1971382 1971543 -248716311 + (TA)n Simple_repeat Simple_repeat 2 162 0 420 136 0 0 chr2 1972209 1972268 -248715586 - AluS SINE Alu -237 72 14 1822 175 14 0 chr2 1973043 1973340 -248714514 - AluJo SINE Alu -10 302 2 2636 20 0 3 chr2 1973975 1974274 -248713580 - AluY SINE Alu -13 298 1 285 51 0 0 chr2 1974543 1974582 -248713272 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 309 309 94 69 chr2 1974638 1975042 -248712812 + HAL1 LINE L1 770 1183 -1324 998 223 36 43 chr2 1975042 1975347 -248712507 + MLT1C LTR MaLR 1 303 -164 244 215 114 0 chr2 1975469 1975548 -248712306 + HAL1 LINE L1 1198 1285 -1222 403 253 114 6 chr2 1976683 1976841 -248711013 + MLT1J2 LTR MaLR 8 182 -268 345 238 30 40 chr2 1976840 1976941 -248710913 + MLT1J1 LTR MaLR 202 301 -145 * 329 236 46 78 chr2 1978998 1979201 -248708653 + MIR SINE MIR 44 247 -15 653 250 56 12 chr2 1979692 1980014 -248707840 - MSTD LTR MaLR -14 382 1 21 0 0 0 chr2 1980186 1980207 -248707647 + AT_rich Low_complexity Low_complexity 1 21 0 2172 85 0 11 chr2 1980735 1981017 -248706837 + AluSg SINE Alu 1 279 -31 565 100 0 0 chr2 1981481 1981561 -248706293 + MADE1 DNA Mariner 1 80 0 403 296 72 34 chr2 1981867 1982131 -248705723 + L2 LINE L2 737 1010 -2304 685 250 6 33 chr2 1982154 1982334 -248705520 - FAM SINE Alu 0 175 1 1048 329 68 68 chr2 1982342 1983355 -248704499 + L2 LINE L2 1747 2759 -555 240 377 32 13 chr2 1983955 1984109 -248703745 + L2 LINE L2 2797 2953 -361 21 0 0 0 chr2 1984109 1984130 -248703724 + AT_rich Low_complexity Low_complexity 1 21 0 325 153 14 56 chr2 1984267 1984339 -248703515 - MLT1G LTR MaLR -306 284 216 791 308 42 39 chr2 1984727 1985087 -248702767 - L2 LINE L2 -536 2778 2418 365 326 8 8 chr2 1985266 1985395 -248702459 + MER58A DNA MER1_type 4 132 0 238 267 33 0 chr2 1985404 1985464 -248702390 + MER58A DNA MER1_type 163 224 0 233 229 37 83 chr2 1986762 1986871 -248700983 + MLT1D LTR MaLR 6 109 -517 596 269 88 4 chr2 1986907 1987145 -248700709 + MLT1D LTR MaLR 180 437 -68 4385 237 36 23 chr2 1988143 1988232 -248699622 - Charlie1a DNA MER1_type -1319 1442 1356 2042 156 27 16 chr2 1988232 1988603 -248699251 - THE1C LTR MaLR 0 375 1 9264 134 30 41 chr2 1988603 1990198 -248697656 - THE1C-int LTR MaLR 0 1580 3 1382 201 88 28 chr2 1990200 1990554 -248697300 - THE1C LTR MaLR 0 375 1 4385 237 36 23 chr2 1990554 1991871 -248695983 - Charlie1a DNA MER1_type -1405 1356 13 264 204 32 65 chr2 1993850 1993943 -248693911 - MLT1J LTR MaLR -379 132 43 305 330 82 21 chr2 1994374 1994607 -248693247 + L1MEd LINE L1 563 809 -5310 191 259 0 12 chr2 1994730 1994811 -248693043 + (TA)n Simple_repeat Simple_repeat 1 80 0 342 246 54 42 chr2 1994871 1995038 -248692816 + L1MEd LINE L1 1014 1182 -4937 8386 29 0 0 chr2 1995235 1996268 -248691586 - L1PA3 LINE L1 -1236 4910 3878 7707 19 2 0 chr2 1996268 1997546 -248690308 + L1PA3 LINE L1 4918 6197 0 2323 78 0 0 chr2 1997651 1997933 -248689921 + AluSx SINE Alu 1 282 -30 2010 279 68 44 chr2 1998576 1999257 -248688597 + L1ME1 LINE L1 43 767 -5629 2497 71 0 3 chr2 1999257 1999568 -248688286 + AluY SINE Alu 1 310 -1 2010 279 68 44 chr2 1999568 2000093 -248687761 + L1ME1 LINE L1 767 1278 -5118 1781 181 0 7 chr2 2000100 2000403 -248687451 - AluSx SINE Alu -11 301 1 288 0 0 0 chr2 2000524 2000556 -248687298 + (A)n Simple_repeat Simple_repeat 1 32 0 1314 277 133 20 chr2 2000556 2002233 -248685621 + L1ME1 LINE L1 1624 3426 -2789 900 237 111 45 chr2 2002221 2002268 -248685586 + L1ME1 LINE L1 4525 4567 -1648 * 222 118 0 0 chr2 2002268 2002302 -248685552 + (CA)n Simple_repeat Simple_repeat 1 34 0 900 237 111 45 chr2 2002302 2002769 -248685085 + L1ME1 LINE L1 4567 5073 -1142 905 158 0 0 chr2 2002773 2002906 -248684948 + AluSq/x SINE Alu 1 133 -179 1592 266 46 59 chr2 2003010 2004157 -248683697 + L1ME1 LINE L1 5109 6230 -5 1866 168 0 7 chr2 2004296 2004594 -248683260 + AluJb SINE Alu 1 296 -16 216 0 0 0 chr2 2004598 2004622 -248683232 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 490 277 94 24 chr2 2004978 2005269 -248682585 + L1ME3A LINE L1 5616 5922 -256 2167 135 0 0 chr2 2005351 2005648 -248682206 + AluSx SINE Alu 1 297 -15 2669 39 0 0 chr2 2005870 2006175 -248681679 + AluY SINE Alu 1 305 -6 1516 218 120 30 chr2 2006464 2006956 -248680898 - MER68 LTR ERV1 -4 558 23 259 282 57 16 chr2 2007783 2007907 -248679947 - L1ME4a LINE L1 -47 6074 5946 234 174 0 0 chr2 2007929 2007975 -248679879 + (TA)n Simple_repeat Simple_repeat 1 46 0 195 162 0 0 chr2 2009086 2009123 -248678731 + (TATG)n Simple_repeat Simple_repeat 4 40 0 184 250 115 0 chr2 2009543 2009595 -248678259 + L2 LINE L2 3117 3174 -98 188 336 75 15 chr2 2010099 2010233 -248677621 - MIR3 SINE MIR -35 173 32 2223 106 3 0 chr2 2010486 2010779 -248677075 + AluSq SINE Alu 1 294 -19 416 394 33 21 chr2 2011165 2011500 -248676354 + L3 LINE CR1 1084 1422 -155 23 33 0 0 chr2 2012080 2012110 -248675744 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr2 2012761 2012800 -248675054 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 2013411 2013449 -248674405 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 2013725 2013749 -248674105 + AT_rich Low_complexity Low_complexity 1 24 0 2327 118 8 30 chr2 2014415 2014787 -248673067 - THE1B LTR MaLR 0 364 1 11439 100 8 11 chr2 2014787 2016372 -248671482 - THE1B-int LTR MaLR 0 1580 1 2277 120 19 25 chr2 2016372 2016738 -248671116 - THE1B LTR MaLR 0 364 1 1436 221 24 3 chr2 2017329 2017659 -248670195 + MER2 DNA MER2_type 1 337 -8 557 301 92 15 chr2 2017770 2017976 -248669878 - MIR SINE MIR -27 235 14 307 375 97 21 chr2 2018763 2019051 -248668803 - L2 LINE L2 -1 3271 2962 2324 120 19 6 chr2 2019384 2019743 -248668111 - THE1B LTR MaLR 0 364 1 1497 190 47 0 chr2 2020427 2020701 -248667153 - AluJb SINE Alu -24 288 2 21 0 0 0 chr2 2020766 2020787 -248667067 + AT_rich Low_complexity Low_complexity 1 21 0 1718 172 6 21 chr2 2021119 2021451 -248666403 + MLT1A1 LTR MaLR 33 359 -6 243 61 0 0 chr2 2022558 2022591 -248665263 + (TG)n Simple_repeat Simple_repeat 2 34 0 353 250 11 11 chr2 2023703 2023795 -248664059 + L2 LINE L2 3221 3312 -1 12762 160 19 10 chr2 2024782 2027144 -248660710 + Tigger1 DNA MER2_type 26 2410 -8 254 26 53 0 chr2 2028478 2028516 -248659338 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 195 290 129 16 chr2 2030261 2030385 -248657469 + MIR SINE MIR 107 244 -18 383 169 0 0 chr2 2031389 2031466 -248656388 - L1PA15 LINE L1 -2 6163 6087 2906 155 21 6 chr2 2031468 2031990 -248655864 - L1PA15 LINE L1 -187 5978 5449 869 185 25 35 chr2 2032901 2033101 -248654753 + MER20 DNA MER1_type 1 198 -21 24 0 0 0 chr2 2033554 2033578 -248654276 + AT_rich Low_complexity Low_complexity 1 24 0 492 357 61 5 chr2 2034410 2034623 -248653231 + L2 LINE L2 2891 3115 -198 204 40 0 0 chr2 2034632 2034657 -248653197 + (TTTAA)n Simple_repeat Simple_repeat 3 27 0 1289 152 17 35 chr2 2034657 2034879 -248652975 - AluJo SINE Alu -29 283 64 395 266 105 0 chr2 2035137 2035280 -248652574 - MIR SINE MIR -13 249 92 306 0 0 0 chr2 2035595 2035629 -248652225 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 333 19 0 chr2 2035668 2035722 -248652132 + MER5A DNA MER1_type 72 126 -63 2371 235 34 14 chr2 2037299 2037954 -248649900 + Charlie1a DNA MER1_type 1 668 -787 827 181 84 34 chr2 2037973 2038210 -248649644 + Charlie1a DNA MER1_type 856 1104 -351 1523 179 94 21 chr2 2038774 2038890 -248648964 + L1MA9 LINE L1 5717 5823 -489 1708 213 29 79 chr2 2038890 2039473 -248648381 - MLT2B3 LTR ERVL 0 554 1 1523 179 94 21 chr2 2039473 2039820 -248648034 + L1MA9 LINE L1 5823 6312 0 845 174 0 0 chr2 2039913 2040045 -248647809 - FRAM SINE Alu -24 152 21 1644 172 97 3 chr2 2043145 2043453 -248644401 - MER1B DNA MER1_type 0 337 1 198 294 0 0 chr2 2044086 2044137 -248643717 - L2 LINE L2 0 3313 3263 1991 153 3 10 chr2 2044233 2044547 -248643307 + AluSx SINE Alu 1 312 0 555 327 104 78 chr2 2044575 2045993 -248641861 - L2 LINE L2 -220 3093 1636 814 302 66 13 chr2 2046531 2046836 -248641018 + LTR16A LTR ERVL 120 440 -10 1073 256 55 23 chr2 2046837 2047236 -248640618 + MLT1C LTR MaLR 1 412 -55 321 384 12 16 chr2 2047425 2047680 -248640174 + ERVL LTR ERVL 4744 4997 -767 1817 186 0 0 chr2 2048037 2048333 -248639521 + AluSx SINE Alu 1 296 -16 1983 141 14 39 chr2 2049023 2049385 -248638469 - L1PA16 LINE L1 -9 6157 5805 277 169 3 0 chr2 2049390 2049454 -248638400 + L1PA16 LINE L1 5752 5801 -365 27 0 0 0 chr2 2049884 2049911 -248637943 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr2 2050188 2050213 -248637641 + AT_rich Low_complexity Low_complexity 1 25 0 832 237 83 28 chr2 2050500 2050863 -248636991 - LTR52 LTR ERVL -37 384 2 1755 158 177 11 chr2 2051236 2051603 -248636251 - MSTA LTR MaLR 0 428 1 284 331 19 0 chr2 2051731 2051885 -248635969 + L1MEc LINE L1 101 257 -6139 1790 266 63 49 chr2 2052727 2053792 -248634062 + L1M4 LINE L1 4174 5253 -893 21 0 0 0 chr2 2055078 2055099 -248632755 + AT_rich Low_complexity Low_complexity 1 21 0 232 297 11 22 chr2 2055393 2055484 -248632370 + L1MEc LINE L1 112 201 -6195 297 323 39 32 chr2 2055543 2055822 -248632032 + L1ME2 LINE L1 5874 6154 -10 22 0 0 0 chr2 2056036 2056058 -248631796 + AT_rich Low_complexity Low_complexity 1 22 0 318 275 23 69 chr2 2056624 2056683 -248631171 - L1MB7 LINE L1 0 6184 6124 2893 151 40 31 chr2 2056683 2057205 -248630649 + MER1A DNA MER1_type 1 527 0 318 275 23 69 chr2 2057205 2057276 -248630578 - L1MB7 LINE L1 -60 6124 6060 1447 216 47 38 chr2 2057312 2057674 -248630180 - L1MB8 LINE L1 -99 6079 5711 1300 199 3 101 chr2 2057674 2058010 -248629844 + AluJo SINE Alu 1 303 -9 1447 216 47 38 chr2 2058010 2058092 -248629762 - L1MB8 LINE L1 -467 5711 5631 1714 254 65 15 chr2 2058092 2058752 -248629102 - L1M4 LINE L1 -3224 2922 2230 232 271 62 70 chr2 2059114 2059243 -248628611 + L2 LINE L2 3164 3291 -22 411 318 83 28 chr2 2059266 2059665 -248628189 + L1 LINE L1 4207 4627 -1519 21 57 0 0 chr2 2059693 2059728 -248628126 + AT_rich Low_complexity Low_complexity 1 35 0 440 235 20 0 chr2 2059926 2060024 -248627830 + MER46A DNA MER2_type 47 146 -90 * 990 199 57 64 chr2 2060022 2060318 -248627536 + MER2 DNA MER2_type 51 344 -1 209 184 0 0 chr2 2061225 2061263 -248626591 - MIR SINE MIR -168 94 57 201 270 63 3 chr2 2061266 2061348 -248626506 - MIR SINE MIR -64 144 81 536 276 0 17 chr2 2061676 2061857 -248625997 + (CA)n Simple_repeat Simple_repeat 1 178 0 273 364 33 54 chr2 2062153 2062337 -248625517 + L2 LINE L2 3075 3254 -18 303 335 80 17 chr2 2062379 2062555 -248625299 + MIR SINE MIR 49 235 -27 233 321 18 113 chr2 2064781 2064949 -248622905 + MIR SINE MIR 23 174 -88 22 0 0 0 chr2 2067624 2067646 -248620208 + AT_rich Low_complexity Low_complexity 1 22 0 450 109 75 9 chr2 2067991 2068338 -248619516 + (TA)n Simple_repeat Simple_repeat 1 370 0 27 73 0 0 chr2 2068417 2068472 -248619382 + AT_rich Low_complexity Low_complexity 1 55 0 192 77 0 0 chr2 2068475 2068501 -248619353 + (CATA)n Simple_repeat Simple_repeat 2 27 0 268 304 96 64 chr2 2069679 2069804 -248618050 + MIR3 SINE MIR 6 134 -74 278 294 22 44 chr2 2069806 2069942 -248617912 + MER94 DNA DNA 1 133 -1 242 194 16 0 chr2 2070378 2070440 -248617414 + GA-rich Low_complexity Low_complexity 4 66 0 279 324 72 9 chr2 2070645 2070756 -248617098 + L2 LINE L2 3195 3312 -1 1572 133 8 0 chr2 2071204 2071452 -248616402 + L1PA13 LINE L1 5905 6154 -9 420 301 20 14 chr2 2071515 2071661 -248616193 - MIR SINE MIR 0 262 116 200 114 68 0 chr2 2073614 2073658 -248614196 + T-rich Low_complexity Low_complexity 1 47 0 236 97 65 0 chr2 2074333 2074395 -248613459 + (TA)n Simple_repeat Simple_repeat 1 66 0 207 381 114 11 chr2 2077578 2077754 -248610100 - L2 LINE L2 -433 2881 2688 25 0 0 0 chr2 2078137 2078162 -248609692 + AT_rich Low_complexity Low_complexity 1 25 0 396 40 0 0 chr2 2078521 2078571 -248609283 + (CA)n Simple_repeat Simple_repeat 1 50 0 218 384 0 0 chr2 2079600 2079699 -248608155 + (CA)n Simple_repeat Simple_repeat 2 100 0 308 304 0 22 chr2 2079716 2079808 -248608046 + L1MC4 LINE L1 6614 6703 -1339 21 36 0 0 chr2 2080175 2080203 -248607651 + AT_rich Low_complexity Low_complexity 1 28 0 223 163 41 0 chr2 2081623 2081672 -248606182 + A-rich Low_complexity Low_complexity 3 53 0 483 302 148 0 chr2 2081686 2081888 -248605966 - MIR SINE MIR -27 235 4 404 296 99 28 chr2 2082058 2082271 -248605583 + MIR SINE MIR 32 259 -3 1759 214 84 15 chr2 2082993 2083447 -248604407 - MER66B LTR ERV1 -1 485 1 873 67 0 8 chr2 2083553 2083673 -248604181 + L1PB1 LINE L1 6030 6148 -3 1342 187 45 11 chr2 2085090 2085443 -248602411 + MER50 LTR ERV1 94 458 -276 3033 168 96 30 chr2 2085443 2086596 -248601258 + pTR5 LTR ERV1 35 455 -259 1041 177 112 0 chr2 2086596 2086828 -248601026 + MER50 LTR ERV1 453 710 -24 22 35 0 0 chr2 2087173 2087202 -248600652 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr2 2088598 2088636 -248599218 + AT_rich Low_complexity Low_complexity 1 38 0 360 343 42 0 chr2 2088670 2088813 -248599041 + L1MC4 LINE L1 6768 6916 -1126 257 250 43 9 chr2 2088827 2088943 -248598911 + L1ME3A LINE L1 5993 6112 -58 369 0 0 0 chr2 2088961 2089002 -248598852 + (TG)n Simple_repeat Simple_repeat 2 42 0 349 238 131 52 chr2 2089059 2089311 -248598543 + L1MC4 LINE L1 6958 7229 -813 558 266 94 11 chr2 2089879 2090154 -248597700 + AluSx SINE Alu 5 302 0 1006 168 0 0 chr2 2090661 2090816 -248597038 - AluSg/x SINE Alu -3 307 153 2238 92 0 14 chr2 2091386 2091681 -248596173 + AluY SINE Alu 1 291 -20 1200 215 63 26 chr2 2092484 2092833 -248595021 + MLT1A1 LTR MaLR 1 362 -3 187 200 0 80 chr2 2093765 2093815 -248594039 + L3 LINE CR1 1188 1233 -344 322 285 45 63 chr2 2094552 2094807 -248593047 - MIR SINE MIR -13 249 1 923 140 6 0 chr2 2095428 2095599 -248592255 + (TG)n Simple_repeat Simple_repeat 2 173 0 1561 189 28 7 chr2 2095882 2096168 -248591686 + AluSx SINE Alu 1 292 -20 194 274 105 32 chr2 2096518 2096613 -248591241 + MIR SINE MIR 116 217 -45 206 235 0 44 chr2 2096726 2096794 -248591060 + GA-rich Low_complexity Low_complexity 4 68 0 263 299 90 68 chr2 2097287 2097464 -248590390 + MIR SINE MIR 22 202 -60 1645 161 84 0 chr2 2097560 2097846 -248590008 + AluSx SINE Alu 1 310 -2 573 248 183 43 chr2 2098071 2098486 -248589368 + L1MC4a LINE L1 7026 7498 -310 610 83 0 0 chr2 2098502 2098586 -248589268 + AluY SINE Alu 214 297 -14 22 94 0 0 chr2 2098786 2098850 -248589004 + AT_rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr2 2098966 2098996 -248588858 + AT_rich Low_complexity Low_complexity 1 30 0 31 44 0 0 chr2 2099247 2099292 -248588562 + AT_rich Low_complexity Low_complexity 1 45 0 1767 226 11 8 chr2 2099480 2099842 -248588012 - MLT1A1 LTR MaLR -2 363 1 195 286 67 84 chr2 2100084 2100203 -248587651 - L2 LINE L2 -1724 1590 1474 29 47 0 0 chr2 2100413 2100456 -248587398 + AT_rich Low_complexity Low_complexity 1 43 0 272 267 0 0 chr2 2100542 2100602 -248587252 + MSTC LTR MaLR 49 108 -320 274 317 10 0 chr2 2101863 2101964 -248585890 + MLT1J LTR MaLR 77 178 -333 1359 162 35 4 chr2 2102634 2102862 -248584992 + AluSg/x SINE Alu 73 307 -5 2334 85 7 0 chr2 2102940 2103234 -248584620 + AluSc SINE Alu 1 296 -13 1965 121 17 17 chr2 2103746 2104035 -248583819 + AluSx SINE Alu 1 289 -23 358 115 16 0 chr2 2104038 2104099 -248583755 - L1MB4 LINE L1 -28 6152 6091 2151 120 13 0 chr2 2104551 2104859 -248582995 - AluSp SINE Alu -1 312 1 3384 238 87 26 chr2 2104978 2105267 -248582587 + MER45B DNA AcHobo 1 271 -1310 2251 173 14 42 chr2 2105267 2105701 -248582153 - MSTB LTR MaLR -4 422 1 3384 238 87 26 chr2 2105701 2106392 -248581462 + MER45B DNA AcHobo 271 1040 0 845 261 28 21 chr2 2106589 2106880 -248580974 - L1PB3 LINE L1 -2986 3160 2868 5646 206 103 4 chr2 2106880 2108243 -248579611 + L1PB3 LINE L1 3186 4683 -1463 2009 173 55 107 chr2 2108233 2108444 -248579410 + L1PB3 LINE L1 5567 5788 -366 * 261 0 0 0 chr2 2108444 2108473 -248579381 + (TG)n Simple_repeat Simple_repeat 2 30 0 2009 173 55 107 chr2 2108473 2108545 -248579309 + L1PB3 LINE L1 5788 5862 -292 273 29 0 0 chr2 2108545 2108579 -248579275 + (TG)n Simple_repeat Simple_repeat 1 34 0 2009 173 55 107 chr2 2108579 2108900 -248578954 + L1PB3 LINE L1 5862 6140 -14 240 35 0 0 chr2 2109751 2109780 -248578074 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2155 86 0 0 chr2 2109782 2110061 -248577793 - AluY SINE Alu -32 279 1 195 368 35 49 chr2 2112495 2112639 -248575215 - MIR3 SINE MIR -52 156 15 21 0 0 0 chr2 2113732 2113753 -248574101 + AT_rich Low_complexity Low_complexity 1 21 0 236 244 41 32 chr2 2114897 2115020 -248572834 + (TG)n Simple_repeat Simple_repeat 1 124 0 2067 132 6 6 chr2 2115135 2115446 -248572408 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr2 2115542 2115565 -248572289 + AT_rich Low_complexity Low_complexity 1 23 0 2090 180 78 24 chr2 2116549 2116961 -248570893 + Tigger2a DNA MER2_type 1 434 0 1456 196 43 51 chr2 2117172 2117565 -248570289 - MLT1B LTR MaLR 0 390 1 245 109 62 0 chr2 2117622 2117686 -248570168 + (TG)n Simple_repeat Simple_repeat 2 69 0 240 190 6 49 chr2 2117834 2117997 -248569857 + (TG)n Simple_repeat Simple_repeat 1 156 0 401 219 31 31 chr2 2118037 2118197 -248569657 + (TG)n Simple_repeat Simple_repeat 2 161 0 312 294 51 110 chr2 2118301 2118469 -248569385 + L2 LINE L2 2736 2886 -428 2240 116 0 22 chr2 2118469 2118788 -248569066 - AluSx SINE Alu 0 312 1 312 294 51 110 chr2 2118788 2118874 -248568980 + L2 LINE L2 2886 2975 -339 288 130 0 0 chr2 2119105 2119151 -248568703 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 186 150 50 25 chr2 2119281 2119321 -248568533 + L2 LINE L2 2425 2465 -849 363 235 23 68 chr2 2119328 2119460 -248568394 + MER5B DNA MER1_type 23 148 -30 1882 130 7 0 chr2 2119508 2119784 -248568070 + MER61A LTR ERV1 65 342 -1 563 213 5 109 chr2 2120751 2120962 -248566892 - MER53 DNA DNA 0 189 1 1951 121 21 0 chr2 2121730 2122010 -248565844 + AluSx SINE Alu 1 286 -26 261 88 0 53 chr2 2125032 2125089 -248562765 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 3279 191 14 35 chr2 2125214 2125354 -248562500 + MER4D LTR ERV1 217 358 -545 2712 100 14 0 chr2 2125354 2125704 -248562150 + THE1A LTR MaLR 1 355 0 3279 191 14 35 chr2 2125704 2126255 -248561599 + MER4D LTR ERV1 358 894 -9 4364 114 116 130 chr2 2126835 2128260 -248559594 - pTR5 LTR ERV1 0 2438 743 2574 154 18 0 chr2 2128644 2129040 -248558814 + MER57A LTR ERV1 1 403 0 342 273 27 18 chr2 2129090 2129200 -248558654 + MIR3 SINE MIR 89 199 -9 309 264 213 7 chr2 2129411 2129591 -248558263 - MIR SINE MIR -6 256 38 204 254 0 34 chr2 2131130 2131189 -248556665 + GA-rich Low_complexity Low_complexity 2 58 0 259 272 43 11 chr2 2131473 2131565 -248556289 - L1ME LINE L1 -439 5682 5588 220 222 19 0 chr2 2131822 2131876 -248555978 + (CA)n Simple_repeat Simple_repeat 1 55 0 1978 173 80 0 chr2 2131901 2132213 -248555641 - MER1B DNA MER1_type 0 337 1 4303 307 116 28 chr2 2133066 2133276 -248554578 - L2 LINE L2 -615 2699 2509 185 0 40 0 chr2 2133276 2133301 -248554553 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4303 307 116 28 chr2 2133301 2134941 -248552913 - L2 LINE L2 -805 2509 632 2307 100 0 0 chr2 2134941 2135241 -248552613 + AluSc SINE Alu 1 300 -9 4303 307 116 28 chr2 2135241 2135534 -248552320 - L2 LINE L2 -2682 632 366 1429 237 52 43 chr2 2135578 2135641 -248552213 - MLT1C LTR MaLR -3 464 403 711 170 0 0 chr2 2135641 2135747 -248552107 + U6 snRNA snRNA 1 106 -1 1429 237 52 43 chr2 2135747 2136143 -248551711 - MLT1C LTR MaLR -64 403 1 2358 138 13 16 chr2 2136482 2136858 -248550996 - THE1C LTR MaLR 0 375 1 196 227 23 0 chr2 2136929 2136973 -248550881 - L2 LINE L2 -81 3191 3147 336 225 67 11 chr2 2137358 2137447 -248550407 - MLT1C LTR MaLR 0 467 374 3001 96 0 10 chr2 2138804 2139212 -248548642 + MLT2A1 LTR ERVL 1 404 -40 186 273 64 36 chr2 2139342 2139452 -248548402 + L2 LINE L2 2179 2291 -1023 244 337 23 12 chr2 2139992 2140078 -248547776 - MER5B DNA MER1_type -80 98 12 3409 114 7 0 chr2 2140124 2140573 -248547281 - MLT2A2 LTR ERVL -1 452 1 365 85 0 0 chr2 2141298 2141345 -248546509 - Alu SINE Alu -252 47 1 2551 118 0 3 chr2 2141603 2141958 -248545896 - THE1B LTR MaLR 0 364 11 262 308 34 51 chr2 2142460 2142577 -248545277 - MIR SINE MIR -100 162 48 449 386 55 48 chr2 2145937 2146336 -248541518 + L2 LINE L2 2870 3271 -1 837 183 109 45 chr2 2146667 2146869 -248540985 + MSTD LTR MaLR 1 215 -181 500 223 0 0 chr2 2146912 2147006 -248540848 + MSTD LTR MaLR 303 396 0 190 268 26 72 chr2 2147700 2147853 -248540001 + L2 LINE L2 2279 2424 -890 811 213 12 0 chr2 2148747 2148907 -248538947 + FRAM SINE Alu 1 159 -17 31 0 0 0 chr2 2149090 2149121 -248538733 + AT_rich Low_complexity Low_complexity 1 31 0 271 299 0 0 chr2 2149303 2149380 -248538474 + L1ME1 LINE L1 4522 4598 -1548 * 2744 261 31 27 chr2 2149376 2150731 -248537123 + L1ME1 LINE L1 4801 6162 -4 963 145 0 0 chr2 2150739 2150911 -248536943 + (TA)n Simple_repeat Simple_repeat 1 172 0 2049 151 53 34 chr2 2150935 2151292 -248536562 - THE1B LTR MaLR 0 364 1 5311 133 14 5 chr2 2351318 2352176 -248335678 + Tigger1 DNA MER2_type 1553 2418 0 195 237 0 0 chr2 2354129 2354167 -248333687 + L2 LINE L2 3211 3248 -24 272 250 13 26 chr2 2357421 2357497 -248330357 + MLT1J LTR MaLR 423 497 -14 2334 81 20 0 chr2 2362404 2362702 -248325152 - AluSq SINE Alu -9 304 1 207 0 50 50 chr2 2363241 2363281 -248324573 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 254 193 48 0 chr2 2363454 2363537 -248324317 + (CA)n Simple_repeat Simple_repeat 1 87 0 2699 58 0 0 chr2 2365045 2365356 -248322498 + AluY SINE Alu 1 311 0 263 292 23 29 chr2 2366225 2366396 -248321458 - L1ME4a LINE L1 -25 6096 5927 2155 115 16 3 chr2 2368144 2368448 -248319406 - AluSg SINE Alu -2 308 1 278 336 9 0 chr2 2371939 2372055 -248315799 + (CA)n Simple_repeat Simple_repeat 2 118 0 288 309 138 13 chr2 2372624 2372922 -248314932 + L2 LINE L2 2622 2956 -358 210 326 11 11 chr2 2373103 2373195 -248314659 + L2 LINE L2 3187 3278 -35 333 0 0 0 chr2 2374185 2374222 -248313632 + (TG)n Simple_repeat Simple_repeat 2 38 0 262 157 41 41 chr2 2376275 2376447 -248311407 + (CA)n Simple_repeat Simple_repeat 1 172 0 387 131 38 46 chr2 2376548 2376796 -248311058 + (CA)n Simple_repeat Simple_repeat 1 245 0 194 157 22 52 chr2 2377072 2377206 -248310648 + (CA)n Simple_repeat Simple_repeat 2 131 0 308 133 54 24 chr2 2377267 2377433 -248310421 + (CA)n Simple_repeat Simple_repeat 2 172 0 252 351 55 20 chr2 2377542 2377744 -248310110 + L2 LINE L2 1834 2042 -1272 594 0 0 0 chr2 2379282 2379348 -248308506 + (TC)n Simple_repeat Simple_repeat 2 67 0 246 394 42 13 chr2 2388133 2388369 -248299485 + L1MC4a LINE L1 5385 5627 -2181 1573 92 29 103 chr2 2388381 2388730 -248299124 + L1PA8 LINE L1 3104 3426 -2720 8211 93 6 3 chr2 2388730 2390730 -248297124 + L1PA8 LINE L1 4164 6166 -6 2011 123 14 0 chr2 2390813 2391089 -248296765 + AluSx SINE Alu 1 280 -32 207 0 0 0 chr2 2391089 2391112 -248296742 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 752 273 113 10 chr2 2391147 2391440 -248296414 + MER46C DNA MER2_type 1 323 -15 308 259 6 84 chr2 2391452 2391618 -248296236 + L1MC4a LINE L1 5713 5865 -1943 22 35 0 0 chr2 2391798 2391827 -248296027 + AT_rich Low_complexity Low_complexity 1 29 0 331 289 114 24 chr2 2392596 2392928 -248294926 + L1M4 LINE L1 2120 2481 -3665 1137 272 15 9 chr2 2393013 2393348 -248294506 - MER58B DNA MER1_type 0 341 5 562 304 39 5 chr2 2394383 2394587 -248293267 + Charlie8 DNA MER1_type 27 237 -2180 837 209 0 0 chr2 2395464 2395617 -248292237 - FRAM SINE Alu -12 164 12 229 262 159 37 chr2 2396540 2396647 -248291207 + MIR3 SINE MIR 39 158 -50 412 262 0 0 chr2 2399625 2399728 -248288126 + L1MB8 LINE L1 6076 6178 0 574 154 34 0 chr2 2400328 2400477 -248287377 + (TG)n Simple_repeat Simple_repeat 2 155 0 355 186 40 23 chr2 2400528 2400705 -248287149 + (TG)n Simple_repeat Simple_repeat 1 180 0 507 177 37 0 chr2 2400749 2400913 -248286941 + (TG)n Simple_repeat Simple_repeat 2 171 0 275 184 29 10 chr2 2400936 2401039 -248286815 + (TG)n Simple_repeat Simple_repeat 2 106 0 539 172 44 0 chr2 2401062 2401409 -248286445 + (TG)n Simple_repeat Simple_repeat 1 362 0 1992 121 32 24 chr2 2402360 2402700 -248285154 + MER61A LTR ERV1 1 343 0 2251 97 3 0 chr2 2403920 2404210 -248283644 + AluSq SINE Alu 1 291 -22 1508 139 15 120 chr2 2404362 2404686 -248283168 + AluJb SINE Alu 1 290 -12 196 294 134 8 chr2 2407077 2407196 -248280658 - MIR3 SINE MIR -54 154 21 471 317 87 0 chr2 2409504 2409687 -248278167 + MER58B DNA MER1_type 92 290 -51 227 231 192 46 chr2 2410408 2410538 -248277316 + MIR SINE MIR 113 261 -1 2232 124 0 3 chr2 2410763 2411062 -248276792 + AluSq SINE Alu 1 298 -15 207 0 0 0 chr2 2411911 2411934 -248275920 + (A)n Simple_repeat Simple_repeat 1 23 0 1119 72 0 0 chr2 2412225 2412377 -248275477 + L1PA8 LINE L1 6017 6168 -4 21 0 0 0 chr2 2412438 2412459 -248275395 + AT_rich Low_complexity Low_complexity 1 21 0 364 177 0 0 chr2 2415422 2415484 -248272370 + MLT1A2 LTR MaLR 4 65 -402 619 239 95 23 chr2 2417290 2417553 -248270301 + MER33 DNA MER1_type 43 324 0 527 233 47 31 chr2 2417689 2417882 -248269972 + L1ME LINE L1 815 1010 -5060 700 224 33 0 chr2 2418298 2418450 -248269404 + MER5A DNA MER1_type 33 189 0 234 307 24 87 chr2 2419785 2419912 -248267942 - MIR SINE MIR -57 151 33 240 271 0 57 chr2 2420374 2420444 -248267410 - MIR3 SINE MIR 0 208 143 2290 84 3 3 chr2 2420688 2420972 -248266882 + AluSq SINE Alu 1 284 -29 207 0 0 0 chr2 2420975 2420998 -248266856 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2334 111 0 0 chr2 2421315 2421622 -248266232 - AluSx SINE Alu -5 307 1 2006 106 0 4 chr2 2421885 2422150 -248265704 + AluSx SINE Alu 34 297 -15 1112 234 42 28 chr2 2422956 2423315 -248264539 + MLT1A1 LTR MaLR 2 365 0 1280 171 33 4 chr2 2423740 2423870 -248263984 - MER4A LTR ERV1 0 664 549 1949 91 12 4 chr2 2423870 2424161 -248263693 - AluSx SINE Alu 0 319 27 1280 171 33 4 chr2 2424161 2424278 -248263576 - MER4A LTR ERV1 -115 549 437 431 145 28 45 chr2 2425379 2425524 -248262330 - MER4A LTR ERV1 -203 461 261 601 141 0 10 chr2 2425524 2425623 -248262231 - MER4A LTR ERV1 -566 98 1 953 242 28 32 chr2 2430403 2430688 -248257166 + MLT1A2 LTR MaLR 62 345 -29 365 319 30 15 chr2 2430788 2430923 -248256931 - L1MC/D LINE L1 -2060 5748 5612 222 237 0 54 chr2 2431215 2431401 -248256453 + (CCA)n Simple_repeat Simple_repeat 2 177 0 410 214 0 33 chr2 2431437 2431619 -248256235 + (CCA)n Simple_repeat Simple_repeat 2 177 0 308 102 25 146 chr2 2431662 2432022 -248255832 + (CCCA)n Simple_repeat Simple_repeat 1 316 0 * 351 211 0 49 chr2 2431702 2432078 -248255776 + (CCA)n Simple_repeat Simple_repeat 1 357 0 345 194 0 54 chr2 2432193 2432379 -248255475 + (CCA)n Simple_repeat Simple_repeat 2 177 0 2347 88 3 3 chr2 2433446 2433743 -248254111 - AluSq SINE Alu -16 297 1 696 263 59 4 chr2 2435316 2435552 -248252302 - MER58 DNA MER1_type -2153 267 19 308 299 13 44 chr2 2436747 2436874 -248250980 + MIR SINE MIR 27 138 -124 2421 112 0 0 chr2 2436874 2437186 -248250668 + AluSx SINE Alu 1 312 0 308 299 13 44 chr2 2437186 2437256 -248250598 + MIR SINE MIR 138 209 -53 205 292 56 22 chr2 2437560 2437649 -248250205 - MIR3 SINE MIR -50 158 67 371 263 5 58 chr2 2438472 2438857 -248248997 + (CCAA)n Simple_repeat Simple_repeat 1 364 0 212 223 27 47 chr2 2438879 2439027 -248248827 + (CTACT)n Simple_repeat Simple_repeat 1 145 0 219 217 108 36 chr2 2439129 2439295 -248248559 + (CCCTA)n Simple_repeat Simple_repeat 1 178 0 365 102 17 0 chr2 2440535 2440594 -248247260 + (TG)n Simple_repeat Simple_repeat 1 60 0 715 201 5 9 chr2 2440596 2441152 -248246702 + GA-rich Low_complexity Low_complexity 1 554 0 255 169 46 15 chr2 2441181 2441246 -248246608 - MLT2D LTR ERVL -50 364 298 351 202 0 0 chr2 2441332 2441431 -248246423 + CT-rich Low_complexity Low_complexity 1 99 0 227 208 0 0 chr2 2441431 2441444 -248246410 + MLT2C2 LTR ERVL 408 420 -44 282 56 0 0 chr2 2441444 2441480 -248246374 + (CA)n Simple_repeat Simple_repeat 1 36 0 227 208 0 0 chr2 2441480 2441519 -248246335 + MLT2C2 LTR ERVL 419 460 -4 1216 220 11 11 chr2 2441631 2441917 -248245937 - MLT2D LTR ERVL -128 286 1 2121 46 85 0 chr2 2442274 2442557 -248245297 + AluY SINE Alu 1 305 0 297 295 101 22 chr2 2443130 2443269 -248244585 + MER105 DNA DNA 55 204 0 643 225 6 17 chr2 2443632 2443997 -248243857 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 806 209 3 15 chr2 2444020 2444434 -248243420 + (TGGA)n Simple_repeat Simple_repeat 1 408 0 3041 198 16 7 chr2 2445327 2446003 -248241851 - L1 LINE L1 -1242 4904 4223 7424 23 0 1 chr2 2446028 2447312 -248240542 + L1PA3 LINE L1 4873 6155 0 997 160 21 46 chr2 2447316 2447554 -248240300 - L1 LINE L1 -795 5351 5120 2029 148 3 10 chr2 2448652 2448957 -248238897 - AluJb SINE Alu -9 303 1 1402 275 100 29 chr2 2449140 2449689 -248238165 - MER82 DNA MER2_type -60 593 6 543 304 61 101 chr2 2450250 2450279 -248237575 + L1ME4a LINE L1 5589 5618 -503 1105 72 0 13 chr2 2450279 2450431 -248237423 + L1PB1 LINE L1 5995 6144 -7 543 304 61 101 chr2 2450431 2450944 -248236910 + L1ME4a LINE L1 5618 6109 -12 252 0 0 0 chr2 2451872 2451900 -248235954 + (CA)n Simple_repeat Simple_repeat 1 28 0 2710 261 124 55 chr2 2452735 2454177 -248233677 + L1MEc LINE L1 35 1628 -4768 2382 97 0 7 chr2 2454177 2454487 -248233367 + AluSx SINE Alu 1 308 -4 2710 261 124 55 chr2 2454487 2454846 -248233008 + L1MEc LINE L1 1628 1961 -4435 12052 136 60 17 chr2 2454846 2455306 -248232548 - Tigger1 DNA MER2_type -5 2413 1974 2283 121 0 0 chr2 2455306 2455611 -248232243 + AluSc SINE Alu 1 305 -4 12052 136 60 17 chr2 2455611 2457263 -248230591 - Tigger1 DNA MER2_type -444 1974 210 898 154 4 150 chr2 2457269 2457503 -248230351 + AluJo SINE Alu 13 212 -100 2335 98 3 0 chr2 2458258 2458554 -248229300 - AluSx SINE Alu -11 301 5 1933 143 10 3 chr2 2459272 2459566 -248228288 - AluSx SINE Alu -16 296 1 229 318 36 55 chr2 2461430 2461540 -248226314 + L2 LINE L2 3145 3252 -20 654 142 0 28 chr2 2464324 2464465 -248223389 + (GGA)n Simple_repeat Simple_repeat 1 137 0 218 382 0 0 chr2 2464486 2464651 -248223203 + G-rich Low_complexity Low_complexity 1 165 0 21 57 0 0 chr2 2464929 2464964 -248222890 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 2465228 2465249 -248222605 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 2465262 2465283 -248222571 + GC_rich Low_complexity Low_complexity 1 21 0 180 261 0 0 chr2 2465574 2465620 -248222234 - MIR SINE MIR -10 252 207 308 267 125 17 chr2 2466393 2466513 -248221341 - MLT1F1 LTR MaLR -264 303 171 607 299 95 79 chr2 2468721 2469406 -248218448 - MER21B LTR ERV1 -147 716 21 225 287 23 11 chr2 2469602 2469689 -248218165 + L2 LINE L2 2271 2358 -956 1005 207 50 1 chr2 2470879 2471121 -248216733 + MLT2C1 LTR ERVL 61 343 -54 195 250 0 0 chr2 2471121 2471205 -248216649 + (TCCA)n Simple_repeat Simple_repeat 2 85 0 226 297 0 0 chr2 2471205 2471269 -248216585 + CT-rich Low_complexity Low_complexity 1 64 0 745 209 0 0 chr2 2473117 2473246 -248214608 + FLAM_C SINE Alu 1 129 -4 1844 179 74 60 chr2 2473493 2473928 -248213926 + MER41B LTR ERV1 105 384 -94 2377 95 3 0 chr2 2473928 2474222 -248213632 - AluSx SINE Alu -17 295 1 1844 179 74 60 chr2 2474222 2474310 -248213544 + MER41B LTR ERV1 384 469 -9 31 0 0 0 chr2 2474403 2474434 -248213420 + AT_rich Low_complexity Low_complexity 1 31 0 219 301 42 49 chr2 2474441 2474584 -248213270 - MIR SINE MIR -75 187 46 252 277 145 0 chr2 2475290 2475373 -248212481 + MIR SINE MIR 52 146 -62 198 282 214 8 chr2 2477014 2477131 -248210723 - MER5A DNA MER1_type -23 166 26 252 205 0 108 chr2 2477138 2477221 -248210633 - MER66A LTR ERV1 -13 465 392 2418 96 0 0 chr2 2477256 2477568 -248210286 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 2477612 2477633 -248210221 + AT_rich Low_complexity Low_complexity 1 21 0 2186 109 7 3 chr2 2477642 2477964 -248209890 + AluSq SINE Alu 1 313 0 322 262 91 9 chr2 2478809 2478923 -248208931 + MIR SINE MIR 30 151 -63 3338 170 25 47 chr2 2479584 2480369 -248207485 - pTR5 LTR ERV1 -730 1708 743 726 82 0 0 chr2 2480369 2480466 -248207388 - MER4B LTR ERV1 -96 514 418 39671 64 9 3 chr2 2480469 2486544 -248201310 + L1PA5 LINE L1 11 6124 -30 653 144 8 44 chr2 2486544 2486745 -248201109 - MER4A LTR ERV1 -173 593 264 521 146 31 10 chr2 2486748 2486844 -248201010 - MER4A LTR ERV1 -566 98 1 337 313 45 8 chr2 2486845 2486979 -248200875 + MLT1C LTR MaLR 43 181 -286 573 211 0 64 chr2 2487957 2488113 -248199741 + MER77 LTR ERV1 62 207 -398 228 261 35 78 chr2 2488333 2488448 -248199406 - MER5A DNA MER1_type 0 189 80 272 303 18 37 chr2 2488820 2488954 -248198900 - MIR SINE MIR -53 155 24 1750 176 0 29 chr2 2489070 2489376 -248198478 + AluJo SINE Alu 1 297 -15 2413 53 3 3 chr2 2489388 2489699 -248198155 + AluY SINE Alu 1 311 0 968 189 6 0 chr2 2489699 2489858 -248197996 + AluJo/FRAM SINE Alu 135 294 -18 721 247 52 51 chr2 2491808 2492210 -248195644 - MER67C LTR ERV1 -1 709 119 1037 134 21 5 chr2 2494380 2494566 -248193288 - MER65A LTR ERV1 -4 441 253 1584 216 71 0 chr2 2494568 2494933 -248192921 + MER57A LTR ERV1 3 393 -10 1254 188 4 16 chr2 2494950 2495206 -248192648 - MER65A LTR ERV1 -189 256 4 3435 131 15 71 chr2 2495485 2495835 -248192019 - MER41B LTR ERV1 0 635 340 756 188 0 0 chr2 2495835 2495968 -248191886 + FLAM_C SINE Alu 1 133 0 3435 131 15 71 chr2 2495968 2496290 -248191564 - MER41B LTR ERV1 -295 340 1 2368 110 0 0 chr2 2496594 2496894 -248190960 - AluSx SINE Alu -12 300 1 2146 117 3 0 chr2 2497118 2497408 -248190446 - AluSg SINE Alu -19 291 1 366 247 99 99 chr2 2497659 2497983 -248189871 - MER34C LTR ERV1 -3 582 259 639 261 0 6 chr2 2498071 2498228 -248189626 - MER34C LTR ERV1 -385 200 45 1480 176 53 7 chr2 2498397 2498681 -248189173 + MER57A LTR ERV1 107 403 0 258 250 33 58 chr2 2499135 2499255 -248188599 - LTR23 LTR ERV1 0 437 321 31 0 0 0 chr2 2499358 2499389 -248188465 + AT_rich Low_complexity Low_complexity 1 31 0 484 45 0 15 chr2 2499389 2499456 -248188398 - L1PA4 LINE L1 -3 6152 6087 403 52 0 0 chr2 2499456 2499514 -248188340 + L1PA2 LINE L1 5989 6046 -109 1235 199 77 3 chr2 2499515 2499827 -248188027 - LTR56 LTR ERV1 -110 335 1 383 206 178 9 chr2 2499827 2499933 -248187921 + MER34C LTR ERV1 115 238 -347 361 182 63 6 chr2 2499973 2500192 -248187662 + (CAG)n Simple_repeat Simple_repeat 1 231 0 311 172 63 29 chr2 2500326 2500500 -248187354 + (CAG)n Simple_repeat Simple_repeat 1 180 0 316 190 58 23 chr2 2500704 2500878 -248186976 + (CAG)n Simple_repeat Simple_repeat 1 180 0 383 254 66 104 chr2 2501385 2501672 -248186182 + MER34C LTR ERV1 310 585 0 186 350 60 0 chr2 2502246 2502346 -248185508 + MIR SINE MIR 59 164 -98 1318 240 122 22 chr2 2502353 2502651 -248185203 + MER39 LTR ERV1 1 268 -439 1565 263 142 12 chr2 2502651 2503221 -248184633 - LTR48B LTR ERV1 0 644 1 1318 240 122 22 chr2 2503221 2503513 -248184341 + MER39 LTR ERV1 268 691 -16 557 254 117 0 chr2 2503517 2503714 -248184140 - MER31A LTR ERV1 -249 236 17 2098 115 3 0 chr2 2503793 2504089 -248183765 - AluSx SINE Alu -13 299 3 1549 266 72 13 chr2 2504565 2505092 -248182762 + MER89 LTR ERV1 1 558 -1 439 83 0 0 chr2 2506816 2506876 -248180978 - MER4C LTR ERV1 0 465 406 5183 114 31 9 chr2 2506877 2507223 -248180631 + MER4E LTR ERV1 1 338 -441 1988 123 10 7 chr2 2507223 2507531 -248180323 + AluSg SINE Alu 1 309 -1 5183 114 31 9 chr2 2507531 2507946 -248179908 + MER4E LTR ERV1 338 779 0 368 306 78 29 chr2 2507965 2508250 -248179604 - L1ME4a LINE L1 -225 5896 5549 183 129 0 0 chr2 2510451 2510482 -248177372 + (TA)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr2 2510709 2510734 -248177120 + AT_rich Low_complexity Low_complexity 1 25 0 195 114 0 0 chr2 2511959 2511994 -248175860 + (TG)n Simple_repeat Simple_repeat 2 36 0 2316 103 0 0 chr2 2513088 2513400 -248174454 + AluSx SINE Alu 1 312 0 681 266 153 35 chr2 2516459 2516741 -248171113 + MER58B DNA MER1_type 27 341 0 1928 46 13 0 chr2 2517781 2518020 -248169834 - AluY SINE Alu -69 242 1 180 356 82 7 chr2 2519966 2520101 -248167753 + L3b LINE CR1 1291 1435 -148 2221 110 40 35 chr2 2520223 2520595 -248167259 + THE1C LTR MaLR 1 374 -1 242 340 43 0 chr2 2521148 2521242 -248166612 + MIR SINE MIR 86 183 -79 1024 113 69 13 chr2 2573214 2573373 -248114481 - AluSx SINE Alu -16 296 129 421 121 24 12 chr2 2573373 2573456 -248114398 + CT-rich Low_complexity Low_complexity 1 84 0 925 114 15 8 chr2 2573456 2573588 -248114266 - AluSx SINE Alu -180 133 1 1426 164 0 5 chr2 2575109 2575323 -248112531 + AluJb SINE Alu 2 214 -98 234 150 0 0 chr2 2575355 2575395 -248112459 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 725 145 5 43 chr2 2575395 2575581 -248112273 + GA-rich Low_complexity Low_complexity 2 180 0 641 130 0 68 chr2 2575553 2575745 -248112109 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 * 619 175 9 38 chr2 2575707 2575947 -248111907 + GA-rich Low_complexity Low_complexity 1 232 0 * 735 159 6 28 chr2 2576876 2577058 -248110796 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 341 308 67 51 chr2 2577058 2577311 -248110543 - L1MEd LINE L1 -4903 1216 960 1017 43 12 24 chr2 2577334 2577498 -248110356 + (TCTA)n Simple_repeat Simple_repeat 3 164 0 1173 154 13 44 chr2 2578106 2578333 -248109521 - L1PB2 LINE L1 -8 6143 5924 396 92 67 17 chr2 2578390 2578510 -248109344 + (TCTA)n Simple_repeat Simple_repeat 4 129 0 227 342 70 27 chr2 2580326 2580513 -248107341 + L2 LINE L2 2905 3099 -173 323 305 24 54 chr2 2581096 2581263 -248106591 - MIR3 SINE MIR -15 193 32 735 158 38 0 chr2 2582013 2582146 -248105708 + L1PB4 LINE L1 6019 6156 0 405 206 109 0 chr2 2582555 2582647 -248105207 - Tigger1 DNA MER2_type 0 2418 2317 1159 206 25 4 chr2 2582649 2582925 -248104929 + L1MA4 LINE L1 6012 6293 -7 13293 138 42 4 chr2 2583144 2585345 -248102509 - Tigger1 DNA MER2_type -134 2284 1 278 297 71 34 chr2 2587353 2587619 -248100235 + L1ME4a LINE L1 5622 5897 -224 367 73 18 0 chr2 2587842 2587897 -248099957 - L1PB3 LINE L1 -3 6151 6096 361 189 301 35 chr2 2590250 2590393 -248097461 - MER5A DNA MER1_type -4 185 5 234 234 16 0 chr2 2590729 2590793 -248097061 + MLT1L LTR MaLR 550 614 -1 185 259 93 0 chr2 2593651 2593705 -248094149 - MIR SINE MIR -87 175 117 4532 176 26 6 chr2 2593795 2595566 -248092288 + L1PA16 LINE L1 4326 6166 0 22 56 0 0 chr2 2595890 2595926 -248091928 + AT_rich Low_complexity Low_complexity 1 36 0 2333 119 3 0 chr2 2596203 2596514 -248091340 - AluSx SINE Alu 0 312 1 627 351 39 0 chr2 2597899 2598204 -248089650 - MER58B DNA MER1_type 0 341 25 263 183 28 0 chr2 2598570 2598641 -248089213 + (CAGA)n Simple_repeat Simple_repeat 3 75 0 2365 64 0 0 chr2 2599054 2599350 -248088504 - AluY SINE Alu -15 296 1 294 184 105 26 chr2 2599402 2599478 -248088376 + L1PB4 LINE L1 6070 6151 -5 362 191 0 0 chr2 2600471 2600534 -248087320 - AluSx SINE Alu -5 297 235 1239 131 0 0 chr2 2600536 2600711 -248087143 - AluSx SINE Alu -137 175 1 25 0 0 0 chr2 2600894 2600919 -248086935 + AT_rich Low_complexity Low_complexity 1 25 0 419 243 30 65 chr2 2601229 2601398 -248086456 - MER5B DNA MER1_type -10 168 6 291 114 0 0 chr2 2602678 2602722 -248085132 + (TG)n Simple_repeat Simple_repeat 2 45 0 910 238 94 20 chr2 2602759 2603100 -248084754 - L1MD3 LINE L1 -8 7987 7622 1973 127 0 10 chr2 2603114 2603422 -248084432 - AluSx SINE Alu -7 305 1 839 128 6 70 chr2 2603480 2603549 -248084305 - AluSx SINE Alu -109 203 131 1915 68 0 12 chr2 2603549 2603797 -248084057 - AluY SINE Alu -16 295 51 839 128 6 70 chr2 2603797 2603883 -248083971 - AluSx SINE Alu -181 131 58 2098 99 7 0 chr2 2604110 2604403 -248083451 - AluSq SINE Alu -16 297 3 1705 144 0 75 chr2 2605547 2605668 -248082186 + AluJo SINE Alu 1 129 -183 180 0 0 0 chr2 2605668 2605688 -248082166 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1705 144 0 75 chr2 2605688 2605900 -248081954 + AluJo SINE Alu 129 309 -3 22 0 0 0 chr2 2607691 2607713 -248080141 + AT_rich Low_complexity Low_complexity 1 22 0 772 176 0 22 chr2 2607870 2608006 -248079848 - AluJb SINE Alu -11 301 169 329 379 38 17 chr2 2608007 2608242 -248079612 + L1ME4a LINE L1 5653 5892 -229 195 316 63 25 chr2 2608408 2608487 -248079367 + MIR SINE MIR 84 165 -97 22 35 0 0 chr2 2611380 2611409 -248076445 + AT_rich Low_complexity Low_complexity 1 29 0 2246 93 0 7 chr2 2612727 2613037 -248074817 + AluSg SINE Alu 3 310 0 182 333 76 31 chr2 2613287 2613641 -248074213 + L2 LINE L2 2257 2626 -688 297 284 115 34 chr2 2614302 2614451 -248073403 - MIR3 SINE MIR -51 157 44 434 216 128 24 chr2 2615600 2615725 -248072129 - MIR3 SINE MIR -26 182 45 207 226 19 0 chr2 2618085 2618138 -248069716 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 198 91 0 0 chr2 2618462 2618495 -248069359 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 1777 45 45 0 chr2 2618495 2618718 -248069136 - AluY SINE Alu -27 284 52 187 70 116 0 chr2 2619046 2619089 -248068765 + A-rich Low_complexity Low_complexity 3 50 0 242 215 13 38 chr2 2620162 2620241 -248067613 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 21 0 0 0 chr2 2620309 2620330 -248067524 + AT_rich Low_complexity Low_complexity 1 21 0 185 128 0 26 chr2 2622019 2622058 -248065796 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1738 139 85 0 chr2 2625309 2625590 -248062264 - AluSx SINE Alu -7 305 1 1670 154 49 0 chr2 2626706 2626991 -248060863 - AluJb SINE Alu -13 299 1 231 311 78 0 chr2 2628485 2628575 -248059279 - MIR3 SINE MIR -16 192 96 643 123 61 0 chr2 2629526 2629640 -248058214 - L1PA15 LINE L1 -7 6158 6038 625 281 144 22 chr2 2631238 2631598 -248056256 - L2 LINE L2 -62 3251 2848 398 249 67 61 chr2 2632508 2632673 -248055181 + MER3 DNA MER1_type 40 205 -4 2414 53 3 0 chr2 2632720 2633023 -248054831 - AluY SINE Alu -7 304 1 222 214 29 14 chr2 2633036 2633106 -248054748 + (TA)n Simple_repeat Simple_repeat 2 72 0 213 139 0 0 chr2 2633408 2633451 -248054403 + (TC)n Simple_repeat Simple_repeat 2 44 0 387 0 0 0 chr2 2633478 2633521 -248054333 + (CA)n Simple_repeat Simple_repeat 2 44 0 297 230 107 89 chr2 2634302 2634476 -248053378 - MIR SINE MIR -50 212 36 1996 126 0 13 chr2 2634671 2634973 -248052881 - AluSp SINE Alu -15 298 1 197 239 65 98 chr2 2637433 2637525 -248050329 + MIR SINE MIR 117 205 -57 311 326 61 15 chr2 2640386 2640518 -248047336 + L1MC4 LINE L1 6582 6719 -1323 * 326 300 0 55 chr2 2640455 2640565 -248047289 - L1MC4 LINE L1 -1340 6702 6599 234 62 0 0 chr2 2640910 2640942 -248046912 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 576 184 0 0 chr2 2641736 2641883 -248045971 + CT-rich Low_complexity Low_complexity 1 147 0 207 179 0 0 chr2 2641909 2641948 -248045906 + CT-rich Low_complexity Low_complexity 2 40 0 25 75 0 0 chr2 2642480 2642533 -248045321 + AT_rich Low_complexity Low_complexity 1 53 0 1333 87 108 0 chr2 2642852 2643047 -248044807 - L1PA5 LINE L1 0 6154 5939 243 250 66 26 chr2 2643524 2643600 -248044254 + L2 LINE L2 3235 3313 0 352 303 61 36 chr2 2644315 2644480 -248043374 + MIR SINE MIR 86 254 -8 3334 106 42 15 chr2 2644711 2645191 -248042663 + MER1A DNA MER1_type 37 529 0 353 267 95 9 chr2 2645240 2645356 -248042498 + MIR3 SINE MIR 69 194 -14 464 277 85 43 chr2 2648750 2648938 -248038916 - MIR SINE MIR -2 260 65 254 294 50 89 chr2 2648917 2649097 -248038757 + MIR SINE MIR 79 251 -11 * 182 122 0 41 chr2 2649255 2649304 -248038550 + (CAGAGA)n Simple_repeat Simple_repeat 5 51 0 218 226 16 0 chr2 2649356 2649418 -248038436 + (CAGAGA)n Simple_repeat Simple_repeat 3 65 0 191 360 10 10 chr2 2649565 2649665 -248038189 - L2 LINE L2 -600 2714 2615 200 290 81 0 chr2 2650377 2650439 -248037415 + MIR SINE MIR 82 148 -60 30 59 0 0 chr2 2650760 2650811 -248037043 + AT_rich Low_complexity Low_complexity 1 51 0 186 43 0 0 chr2 2651437 2651460 -248036394 + (TTCC)n Simple_repeat Simple_repeat 1 23 0 813 133 7 46 chr2 2652731 2652882 -248034972 + FRAM SINE Alu 22 166 -10 2394 83 0 6 chr2 2653125 2653439 -248034415 + AluSx SINE Alu 1 312 0 1004 112 0 0 chr2 2657123 2657257 -248030597 + AluSq/x SINE Alu 1 134 -178 2014 128 0 0 chr2 2657260 2657549 -248030305 + AluSx SINE Alu 3 291 -21 2186 98 0 0 chr2 2658036 2658332 -248029522 + AluSx SINE Alu 1 296 -16 295 366 9 18 chr2 2658562 2658674 -248029180 - MIR3 SINE MIR -52 156 46 1203 124 0 0 chr2 2659176 2659361 -248028493 + L1MA2 LINE L1 6120 6304 0 290 143 44 0 chr2 2661832 2661923 -248025931 + (TA)n Simple_repeat Simple_repeat 2 96 0 267 130 29 14 chr2 2661952 2662021 -248025833 + (TA)n Simple_repeat Simple_repeat 1 70 0 349 333 42 0 chr2 2662250 2662370 -248025484 - MIR SINE MIR -50 212 88 186 43 0 0 chr2 2663165 2663188 -248024666 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 358 306 20 61 chr2 2664172 2664368 -248023486 - L2 LINE L2 -208 3064 2877 195 380 0 0 chr2 2664931 2665010 -248022844 + MIR SINE MIR 172 250 -12 21 0 0 0 chr2 2665625 2665646 -248022208 + AT_rich Low_complexity Low_complexity 1 21 0 1252 181 104 4 chr2 2665913 2666173 -248021681 - AluJo SINE Alu -26 286 1 2397 73 0 0 chr2 2666182 2666485 -248021369 - AluY SINE Alu -8 303 1 221 240 20 0 chr2 2667759 2667809 -248020045 + L2 LINE L2 3222 3272 0 228 122 0 0 chr2 2668987 2669028 -248018826 + (T)n Simple_repeat Simple_repeat 1 41 0 232 316 124 28 chr2 2670239 2670416 -248017438 + MIR SINE MIR 42 235 -27 581 126 0 0 chr2 2670418 2670505 -248017349 - AluJ/FLAM SINE Alu -225 87 1 218 333 0 0 chr2 2671122 2671182 -248016672 + L2 LINE L2 3205 3264 -8 2219 101 3 3 chr2 2671391 2671699 -248016155 + AluSq SINE Alu 1 308 -5 183 375 0 39 chr2 2671994 2672098 -248015756 + L2 LINE L2 3195 3294 -19 276 350 21 0 chr2 2672194 2672291 -248015563 + MIR SINE MIR 13 111 -151 1080 195 107 7 chr2 2672983 2673255 -248014599 - AluJb SINE Alu -13 299 1 5128 87 13 1 chr2 2674257 2674933 -248012921 + LTR8 LTR ERV1 8 691 0 310 317 7 7 chr2 2675130 2675272 -248012582 - L1ME4a LINE L1 -224 5897 5756 25 0 0 0 chr2 2676430 2676455 -248011399 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 2676548 2676570 -248011284 + AT_rich Low_complexity Low_complexity 1 22 0 385 283 76 7 chr2 2678898 2679059 -248008795 + MIR SINE MIR 3 167 -66 212 83 0 28 chr2 2680564 2680600 -248007254 + (GAAAA)n Simple_repeat Simple_repeat 1 35 0 180 307 120 0 chr2 2680992 2681067 -248006787 - L2 LINE L2 -5 3267 3184 22 35 0 0 chr2 2681211 2681240 -248006614 + AT_rich Low_complexity Low_complexity 1 29 0 354 305 48 45 chr2 2682645 2683042 -248004812 - HAL1 LINE L1 -1047 1460 1063 261 327 106 0 chr2 2683254 2683367 -248004487 - MIR SINE MIR -79 183 59 273 323 62 73 chr2 2683620 2683880 -248003974 + MER112 DNA MER1_type 3 259 -1 1874 130 29 69 chr2 2684353 2684729 -248003125 + THE1C LTR MaLR 15 375 0 474 294 0 0 chr2 2685602 2685848 -248002006 + CT-rich Low_complexity Low_complexity 1 246 0 269 331 0 0 chr2 2685999 2686168 -248001686 + CT-rich Low_complexity Low_complexity 3 171 0 290 322 0 6 chr2 2686255 2686435 -248001419 + CT-rich Low_complexity Low_complexity 1 179 0 283 325 0 0 chr2 2686556 2686725 -248001129 + CT-rich Low_complexity Low_complexity 3 171 0 229 346 0 0 chr2 2686638 2686817 -248001037 + (CTTG)n Simple_repeat Simple_repeat 2 180 0 * 445 278 6 6 chr2 2687106 2687286 -248000568 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 244 329 0 0 chr2 2687264 2687506 -248000348 + (CATG)n Simple_repeat Simple_repeat 1 242 0 * 2794 209 86 38 chr2 2687602 2687912 -247999942 - L1MA9 LINE L1 -38 6274 5980 2032 138 0 0 chr2 2687912 2688217 -247999637 - AluSx SINE Alu -5 307 3 2794 209 86 38 chr2 2688217 2688388 -247999466 - L1MA9 LINE L1 -332 5980 5819 180 0 0 0 chr2 2688388 2688408 -247999446 + (TA)n Simple_repeat Simple_repeat 2 21 0 2794 209 86 38 chr2 2688408 2688696 -247999158 - L1MA9 LINE L1 -493 5819 5467 906 118 105 0 chr2 2688696 2688849 -247999005 - MER4C LTR ERV1 0 465 297 * 1246 116 0 5 chr2 2688842 2689031 -247998823 - MER4C LTR ERV1 -277 188 1 6334 201 19 39 chr2 2689032 2689067 -247998787 - L1MA9 LINE L1 -714 5469 5435 3109 165 100 27 chr2 2689067 2689744 -247998110 + LTR8A LTR ERV1 1 727 0 6334 201 19 39 chr2 2689744 2691410 -247996444 - L1MA9 LINE L1 -748 5435 3808 2238 207 57 117 chr2 2692070 2692450 -247995404 + L1MB8 LINE L1 4700 5101 -1077 2031 110 0 43 chr2 2692450 2692776 -247995078 + AluSx SINE Alu 1 312 0 2238 207 57 117 chr2 2692776 2693895 -247993959 + L1MB8 LINE L1 5101 6097 -81 2138 232 44 13 chr2 2693901 2694422 -247993432 + MER44D DNA MER2_type 9 600 -5 424 127 42 0 chr2 2694430 2694501 -247993353 + L1MB7 LINE L1 6101 6174 -10 234 336 91 11 chr2 2697380 2697654 -247990200 - L2 LINE L2 -4 3309 3014 381 102 0 0 chr2 2698976 2699035 -247988819 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 2613 105 8 3 chr2 2700381 2700742 -247987112 + THE1B LTR MaLR 2 364 0 1869 154 14 0 chr2 2701130 2701423 -247986431 - AluJb SINE Alu -15 297 1 2415 74 0 0 chr2 2702894 2703192 -247984662 + AluY SINE Alu 1 298 -13 939 158 7 0 chr2 2703833 2703985 -247983869 + MER50 LTR ERV1 452 604 -130 446 213 11 20 chr2 2705458 2705573 -247982281 - L1MA6 LINE L1 -147 6154 6042 235 298 193 9 chr2 2709996 2710110 -247977744 - L2 LINE L2 -1 3271 3137 2440 119 25 0 chr2 2710530 2710884 -247976970 - THE1B LTR MaLR 0 364 2 2109 104 0 0 chr2 2711361 2711658 -247976196 - AluY SINE Alu 0 312 16 246 291 39 39 chr2 2715273 2715376 -247972478 + MIR3 SINE MIR 13 115 -93 538 360 93 15 chr2 2717643 2718503 -247969351 + L2 LINE L2 2345 3272 -41 1979 140 10 0 chr2 2718644 2718944 -247968910 + AluSx SINE Alu 1 303 -9 227 350 26 43 chr2 2719077 2719194 -247968660 + L2 LINE L2 3072 3186 -86 960 174 0 0 chr2 2720417 2720572 -247967282 + FRAM SINE Alu 5 159 -7 23 33 0 0 chr2 2721956 2721986 -247965868 + AT_rich Low_complexity Low_complexity 1 30 0 1060 259 4 0 chr2 2723269 2723512 -247964342 + MER47B DNA MER2_type 175 418 0 389 335 71 8 chr2 2724149 2724388 -247963466 + L2 LINE L2 490 743 -2571 352 235 147 59 chr2 2727387 2727626 -247960228 - L1MC4a LINE L1 -165 5956 5695 249 316 89 48 chr2 2727631 2727799 -247960055 - MIR SINE MIR 0 262 88 229 217 142 9 chr2 2728094 2728200 -247959654 - L1MC4a LINE L1 -2408 5400 5281 422 312 0 32 chr2 2730569 2730694 -247957160 + MIR SINE MIR 10 130 -132 219 69 0 0 chr2 2730712 2730741 -247957113 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 2126 134 36 36 chr2 2730744 2731102 -247956752 + THE1B LTR MaLR 7 364 0 202 216 0 0 chr2 2731104 2731141 -247956713 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 247 220 60 70 chr2 2731141 2731241 -247956613 + MIR SINE MIR 152 250 -12 4028 195 69 24 chr2 2733039 2734590 -247953264 + L1MB3 LINE L1 4571 6177 -6 249 291 34 11 chr2 2735989 2736164 -247951690 + (AGATG)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr2 2736553 2736576 -247951278 + AT_rich Low_complexity Low_complexity 1 23 0 249 33 0 0 chr2 2737647 2737677 -247950177 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 1037 205 122 42 chr2 2738098 2738434 -247949420 - L1MD2 LINE L1 -10 6349 5987 3183 226 51 10 chr2 2738726 2739610 -247948244 - L1MD2 LINE L1 -324 6035 5120 311 313 12 38 chr2 2739624 2739784 -247948070 + L2 LINE L2 3158 3313 0 352 118 40 26 chr2 2741820 2741896 -247945958 + C-rich Low_complexity Low_complexity 2 78 0 403 192 10 10 chr2 2741915 2742014 -247945840 + CT-rich Low_complexity Low_complexity 1 99 0 24 67 0 0 chr2 2742103 2742148 -247945706 + AT_rich Low_complexity Low_complexity 1 45 0 879 292 134 60 chr2 2742976 2744626 -247943228 - HAL1 LINE L1 -3 2504 732 2230 132 0 0 chr2 2744717 2745028 -247942826 + AluSq SINE Alu 1 311 -2 1592 179 11 7 chr2 2746092 2746377 -247941477 + AluJb SINE Alu 21 306 -6 29 0 0 0 chr2 2746445 2746474 -247941380 + AT_rich Low_complexity Low_complexity 1 29 0 420 20 0 0 chr2 2746979 2747028 -247940826 + (CA)n Simple_repeat Simple_repeat 2 50 0 238 274 12 24 chr2 2747423 2747507 -247940347 - MIR SINE MIR -25 237 155 233 315 47 24 chr2 2747547 2747674 -247940180 + MIR SINE MIR 62 191 -71 437 303 106 31 chr2 2747997 2748610 -247939244 + L1ME LINE L1 4366 5024 -1122 562 205 131 0 chr2 2748622 2748744 -247939110 + FLAM_C SINE Alu 6 143 0 343 275 118 26 chr2 2748750 2749186 -247938668 + L1ME LINE L1 5030 5506 -656 2583 191 19 56 chr2 2750639 2750841 -247937013 - MER44D DNA MER2_type -1882 605 397 2187 102 3 3 chr2 2750841 2751121 -247936733 + AluSx SINE Alu 1 283 -29 189 0 0 0 chr2 2751121 2751142 -247936712 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 2187 102 3 3 chr2 2751142 2751156 -247936698 + AluSx SINE Alu 282 295 -17 2583 191 19 56 chr2 2751156 2751524 -247936330 - MER44D DNA MER2_type -2090 397 1 1201 200 136 4 chr2 2752085 2752350 -247935504 + AluJo SINE Alu 3 302 0 3319 87 20 0 chr2 2753450 2753909 -247933945 + L1PA13 LINE L1 5696 6163 0 2269 103 0 0 chr2 2753912 2754193 -247933661 + AluSp SINE Alu 1 281 -32 261 0 0 0 chr2 2754193 2754222 -247933632 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 362 216 0 9 chr2 2757686 2757797 -247930057 + (CA)n Simple_repeat Simple_repeat 2 111 0 508 238 39 33 chr2 2759002 2759183 -247928671 + MIR SINE MIR 22 203 -59 514 219 182 0 chr2 2759387 2759574 -247928280 + L1MC5 LINE L1 7008 7228 -733 938 246 56 58 chr2 2759724 2760002 -247927852 + L1MC5 LINE L1 7304 7583 -378 2046 97 29 14 chr2 2760002 2760303 -247927551 + AluSx SINE Alu 1 305 0 938 246 56 58 chr2 2760303 2760539 -247927315 + L1MC5 LINE L1 7583 7818 -143 2400 65 0 40 chr2 2762511 2762834 -247925020 + AluY SINE Alu 1 310 -1 30 45 0 0 chr2 2763089 2763133 -247924721 + AT_rich Low_complexity Low_complexity 1 44 0 435 149 0 0 chr2 2764356 2764430 -247923424 + (CA)n Simple_repeat Simple_repeat 1 74 0 311 204 66 72 chr2 2764493 2764660 -247923194 - L1MC4 LINE L1 -188 7854 7689 27 100 0 0 chr2 2764937 2765027 -247922827 + AT_rich Low_complexity Low_complexity 1 90 0 212 297 0 14 chr2 2765195 2765269 -247922585 + CT-rich Low_complexity Low_complexity 4 76 0 280 295 114 0 chr2 2765538 2765643 -247922211 + MIR SINE MIR 24 140 -122 269 266 75 0 chr2 2765950 2766044 -247921810 - L1MC4a LINE L1 -1910 5898 5798 190 328 74 16 chr2 2766165 2766287 -247921567 - MIR SINE MIR -5 257 129 21 0 0 0 chr2 2767058 2767079 -247920775 + AT_rich Low_complexity Low_complexity 1 21 0 307 294 103 38 chr2 2768061 2768245 -247919609 - MIR SINE MIR -29 233 38 555 278 57 10 chr2 2769391 2769600 -247918254 + MER58A DNA MER1_type 2 220 -4 198 103 0 0 chr2 2770683 2770712 -247917142 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2312 109 43 3 chr2 2772284 2772634 -247915220 + L1PA16 LINE L1 5793 6156 -10 368 82 16 0 chr2 2774151 2774212 -247913642 + (CA)n Simple_repeat Simple_repeat 2 63 0 24 103 0 0 chr2 2774252 2774339 -247913515 + AT_rich Low_complexity Low_complexity 1 87 0 22 70 0 0 chr2 2774675 2774718 -247913136 + AT_rich Low_complexity Low_complexity 1 43 0 1848 153 33 24 chr2 2776717 2777051 -247910803 - MER1B DNA MER1_type 0 337 1 340 273 80 33 chr2 2777231 2777381 -247910473 + MER103 DNA DNA 10 166 0 225 178 0 0 chr2 2777611 2777656 -247910198 + CT-rich Low_complexity Low_complexity 3 47 0 297 320 0 0 chr2 2779295 2779370 -247908484 + polypurine Low_complexity Low_complexity 3 77 0 497 99 0 0 chr2 2779470 2779541 -247908313 + L1P3 LINE L1 5384 5454 -700 265 127 0 111 chr2 2779532 2779595 -247908259 + L1MA8 LINE L1 6236 6291 0 * 366 290 55 45 chr2 2781143 2781343 -247906511 - L2 LINE L2 -534 2780 2579 205 316 11 0 chr2 2781398 2781493 -247906361 - L2 LINE L2 -939 2375 2280 223 353 88 0 chr2 2781772 2781908 -247905946 + L2 LINE L2 2211 2358 -956 1777 189 54 23 chr2 2781985 2782082 -247905772 - MLT1A1 LTR MaLR 0 365 272 1675 137 103 37 chr2 2782082 2782432 -247905422 + THE1C LTR MaLR 3 375 0 1777 189 54 23 chr2 2782432 2782688 -247905166 - MLT1A1 LTR MaLR -93 272 1 423 247 147 65 chr2 2784353 2784584 -247903270 - MIR SINE MIR 0 262 13 261 234 68 104 chr2 2785223 2785415 -247902439 + L1MB7 LINE L1 72 256 -6286 778 299 74 11 chr2 2785579 2785943 -247901911 + L1MB7 LINE L1 485 871 -5671 2433 267 49 39 chr2 2786130 2788261 -247899593 + L1MB7 LINE L1 946 3081 -3563 * 3218 219 29 54 chr2 2788249 2788337 -247899517 + L1MB7 LINE L1 4755 4844 -1838 1717 181 79 18 chr2 2788337 2788679 -247899175 + MLT1A1 LTR MaLR 3 365 0 3218 219 29 54 chr2 2788679 2789007 -247898847 + L1MB7 LINE L1 4844 5179 -1503 2421 76 0 22 chr2 2789007 2789324 -247898530 + AluY SINE Alu 1 310 -1 3218 219 29 54 chr2 2789324 2790334 -247897520 + L1MB7 LINE L1 5179 6140 -542 1417 208 7 13 chr2 2790357 2790665 -247897189 + L1MB7 LINE L1 6362 6667 -15 2241 89 0 11 chr2 2791203 2791523 -247896331 - AluSg SINE Alu 0 318 2 234 204 0 20 chr2 2793867 2793916 -247893938 + MLT1E LTR MaLR 113 160 -433 666 287 46 26 chr2 2793986 2794293 -247893561 + MLT1E LTR MaLR 281 593 0 280 281 12 12 chr2 2795113 2795195 -247892659 + L2 LINE L2 3187 3268 -4 240 357 25 25 chr2 2797387 2797583 -247890271 + MIR SINE MIR 44 239 -23 242 261 18 45 chr2 2799052 2799163 -247888691 - MIR3 SINE MIR -4 204 97 303 49 0 0 chr2 2799203 2799244 -247888610 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 194 278 0 37 chr2 2799291 2799345 -247888509 + MIR SINE MIR 66 117 -91 2152 252 63 18 chr2 2799544 2799729 -247888125 + MER82 DNA MER2_type 12 187 -466 14525 135 26 18 chr2 2799729 2802122 -247885732 - Tigger1 DNA MER2_type 0 2418 5 2152 252 63 18 chr2 2802122 2802550 -247885304 + MER82 DNA MER2_type 187 653 0 22 0 0 0 chr2 2802564 2802586 -247885268 + AT_rich Low_complexity Low_complexity 1 22 0 6003 42 0 0 chr2 2802913 2803643 -247884211 - L1PA5 LINE L1 -743 5403 4674 6452 41 1 4 chr2 2803643 2804403 -247883451 + L1PA5 LINE L1 5390 6151 -3 21 0 0 0 chr2 2805525 2805546 -247882308 + AT_rich Low_complexity Low_complexity 1 21 0 1825 176 58 6 chr2 2807253 2807600 -247880254 + MSTB LTR MaLR 2 366 -60 716 199 28 33 chr2 2807985 2808166 -247879688 + MER20 DNA MER1_type 7 186 -33 206 245 20 0 chr2 2810933 2810982 -247876872 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 791 183 4 0 chr2 2811003 2811273 -247876581 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 351 0 0 0 chr2 2812102 2812141 -247875713 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr2 2812398 2812426 -247875428 + AT_rich Low_complexity Low_complexity 1 28 0 1928 141 0 21 chr2 2815827 2816152 -247871702 + AluSx SINE Alu 1 319 0 226 292 60 77 chr2 2816469 2816637 -247871217 + MIR SINE MIR 81 245 -17 770 282 18 0 chr2 2816770 2816990 -247870864 + MER58A DNA MER1_type 1 224 0 441 0 0 0 chr2 2819373 2819422 -247868432 + (TA)n Simple_repeat Simple_repeat 1 49 0 306 287 39 39 chr2 2819819 2819948 -247867906 + L2 LINE L2 1744 1872 -1442 433 188 0 26 chr2 2820028 2820145 -247867709 + CT-rich Low_complexity Low_complexity 3 116 0 389 299 81 11 chr2 2820257 2820528 -247867326 - LTR16A LTR ERVL -16 434 145 221 311 19 9 chr2 2820703 2820809 -247867045 + L2 LINE L2 2229 2335 -979 223 277 40 30 chr2 2822084 2822185 -247865669 - MER5A DNA MER1_type -74 115 14 214 373 77 21 chr2 2823913 2824146 -247863708 + L2 LINE L2 3006 3251 -62 180 111 0 0 chr2 2824186 2824213 -247863641 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 452 232 48 16 chr2 2824748 2824873 -247862981 + L2 LINE L2 3185 3313 0 496 305 30 39 chr2 2826015 2826303 -247861551 + MLT1H1 LTR MaLR 12 297 -288 61 58 0 0 chr2 2827547 2827650 -247860204 + AT_rich Low_complexity Low_complexity 1 103 0 28 0 0 0 chr2 2829964 2829992 -247857862 + AT_rich Low_complexity Low_complexity 1 28 0 1898 98 4 23 chr2 2830706 2830970 -247856884 - AluSg SINE Alu -51 259 1 2312 90 0 13 chr2 2830972 2831273 -247856581 - AluSg SINE Alu -6 304 8 459 323 17 43 chr2 2831668 2831900 -247855954 + MIR SINE MIR 18 243 -19 360 0 0 0 chr2 2832333 2832373 -247855481 + (TG)n Simple_repeat Simple_repeat 1 40 0 180 0 0 0 chr2 2832372 2832392 -247855462 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 1029 213 153 67 chr2 2832743 2832887 -247854967 + MLT1D LTR MaLR 1 131 -374 2065 130 138 5 chr2 2832887 2833265 -247854589 + MSTA LTR MaLR 1 428 0 1029 213 153 67 chr2 2833265 2833585 -247854269 + MLT1D LTR MaLR 131 505 0 2266 113 0 0 chr2 2833795 2834095 -247853759 - AluSx SINE Alu -12 300 1 321 315 87 8 chr2 2834932 2835059 -247852795 + L2 LINE L2 3136 3272 0 1177 73 12 6 chr2 2836585 2836750 -247851104 - L1PA13 LINE L1 -4 6159 5994 318 281 132 12 chr2 2837348 2837515 -247850339 + MIR SINE MIR 20 206 -56 1821 139 10 23 chr2 2837648 2837951 -247849903 - AluSq SINE Alu -14 299 1 21 0 0 0 chr2 2838132 2838153 -247849701 + AT_rich Low_complexity Low_complexity 1 21 0 355 340 69 14 chr2 2838266 2838554 -247849300 + L1 LINE L1 4031 4334 -1812 239 296 0 20 chr2 2838857 2838955 -247848899 + L1 LINE L1 4741 4836 -1310 2659 40 0 0 chr2 2839124 2839421 -247848433 + AluY SINE Alu 1 297 -14 2254 110 3 3 chr2 2841404 2841705 -247846149 - AluSc SINE Alu -8 301 1 3941 60 12 6 chr2 2841746 2842249 -247845605 + L1PA8 LINE L1 5662 6167 -5 1271 182 121 49 chr2 2843947 2844294 -247843560 + MLT1A2 LTR MaLR 1 372 -2 2969 85 3 6 chr2 2844620 2844985 -247842869 + THE1B LTR MaLR 1 364 0 2064 62 4 0 chr2 2845391 2845650 -247842204 + L1PA8 LINE L1 5662 5921 -251 12122 31 2 4 chr2 2846227 2848353 -247839501 + L1PA3 LINE L1 4031 6155 0 2225 85 0 72 chr2 2848835 2849173 -247838681 + AluSx SINE Alu 1 312 0 2393 90 3 0 chr2 2849920 2850230 -247837624 - AluY SINE Alu 0 311 1 1047 125 0 0 chr2 2850230 2850366 -247837488 - AluSq/x SINE Alu -177 136 1 21 0 0 0 chr2 2850810 2850831 -247837023 + AT_rich Low_complexity Low_complexity 1 21 0 2234 112 0 0 chr2 2852188 2852483 -247835371 - AluSx SINE Alu -16 296 2 401 322 32 20 chr2 2902990 2903207 -247784647 - MIR SINE MIR -31 231 17 22 0 0 0 chr2 2904376 2904398 -247783456 + AT_rich Low_complexity Low_complexity 1 22 0 1063 188 58 21 chr2 2904523 2904763 -247783091 - AluJo SINE Alu -2 310 62 1847 157 0 40 chr2 2906515 2906840 -247781014 - AluJb SINE Alu 0 312 1 23 0 0 0 chr2 2906847 2906870 -247780984 + AT_rich Low_complexity Low_complexity 1 23 0 208 261 29 43 chr2 2908150 2908219 -247779635 + L2 LINE L2 3246 3313 0 711 192 0 0 chr2 2911061 2911708 -247776146 + (CAACC)n Simple_repeat Simple_repeat 1 647 0 2220 135 6 0 chr2 2911789 2912100 -247775754 - AluSp SINE Alu 0 313 1 247 329 13 0 chr2 2913246 2913325 -247774529 + MIR3 SINE MIR 81 160 -48 191 293 52 43 chr2 2913952 2914068 -247773786 + MIR SINE MIR 48 164 -98 1796 137 22 4 chr2 2915000 2915299 -247772555 + AluSq SINE Alu 1 304 0 180 0 0 0 chr2 2916260 2916280 -247771574 + (TG)n Simple_repeat Simple_repeat 1 20 0 1163 191 120 11 chr2 2916649 2916916 -247770938 + L1MB3 LINE L1 5695 5990 -193 306 206 43 33 chr2 2917005 2917097 -247770757 + GA-rich Low_complexity Low_complexity 4 96 0 196 264 0 0 chr2 2917485 2917538 -247770316 + L2 LINE L2 3261 3313 0 1372 176 58 6 chr2 2920810 2921089 -247766765 + MLT1D LTR MaLR 250 505 0 183 289 0 0 chr2 2921573 2921618 -247766236 - L2 LINE L2 -11 3302 3258 11861 187 20 9 chr2 2922001 2924502 -247763352 + L1MA2 LINE L1 3530 6055 -1510 6717 127 27 2 chr2 2924500 2925796 -247762058 + L1MA2 LINE L1 6399 7723 0 * 29 78 0 0 chr2 2925879 2925943 -247761911 + AT_rich Low_complexity Low_complexity 1 64 0 411 200 17 9 chr2 2926818 2926933 -247760921 + GA-rich Low_complexity Low_complexity 2 117 0 24 0 0 0 chr2 2927946 2927970 -247759884 + AT_rich Low_complexity Low_complexity 1 24 0 236 213 0 0 chr2 2928105 2928152 -247759702 + A-rich Low_complexity Low_complexity 1 47 0 324 248 59 20 chr2 2929508 2929609 -247758245 + MIR SINE MIR 158 262 0 779 263 42 9 chr2 2931329 2931546 -247756308 + MER58A DNA MER1_type 1 224 0 570 245 34 0 chr2 2932006 2932153 -247755701 - MER5A DNA MER1_type -32 157 6 507 101 0 14 chr2 2932384 2932453 -247755401 + Alu SINE Alu 6 73 -236 739 211 33 33 chr2 2932458 2932638 -247755216 + L1MA9 LINE L1 6004 6183 -129 345 40 0 40 chr2 2932629 2932679 -247755175 - L1HS LINE L1 -1715 4431 4384 * 8347 34 2 2 chr2 2932668 2934549 -247753305 + L1HS LINE L1 4432 6312 0 231 330 45 57 chr2 2934759 2934935 -247752919 + MIR SINE MIR 47 220 -42 355 248 53 53 chr2 2935158 2935291 -247752563 + MIR SINE MIR 60 192 -70 351 96 0 0 chr2 2936106 2936158 -247751696 + (TG)n Simple_repeat Simple_repeat 2 53 0 353 265 12 0 chr2 2937086 2937169 -247750685 + L2 LINE L2 3230 3313 0 290 83 0 42 chr2 2937314 2937383 -247750471 + Alu SINE Alu 249 301 0 2427 67 0 3 chr2 2937394 2937693 -247750161 + AluY SINE Alu 1 298 -13 196 75 25 25 chr2 2937899 2937939 -247749915 + (TA)n Simple_repeat Simple_repeat 2 41 0 387 103 17 0 chr2 2938891 2938949 -247748905 + L1PA5 LINE L1 6092 6150 -4 287 319 101 17 chr2 2939013 2939132 -247748722 - MIR3 SINE MIR -68 140 12 434 335 53 33 chr2 2939905 2940005 -247747849 + MIR SINE MIR 13 109 -153 1922 101 77 14 chr2 2940005 2940291 -247747563 - AluSq SINE Alu -9 304 1 434 335 53 33 chr2 2940291 2940435 -247747419 + MIR SINE MIR 109 262 0 239 301 147 15 chr2 2940633 2940769 -247747085 + MIR SINE MIR 84 237 -25 370 289 59 15 chr2 2941046 2941181 -247746673 - MIR SINE MIR -24 238 98 2416 117 33 22 chr2 2941614 2941974 -247745880 + THE1B LTR MaLR 1 364 0 261 283 50 0 chr2 2942295 2942414 -247745440 - MIR SINE MIR -61 147 21 190 257 115 35 chr2 2944251 2944364 -247743490 - MER5C DNA MER1_type -202 122 1 972 264 54 20 chr2 2944948 2945300 -247742554 + MLT1A1 LTR MaLR 2 365 0 568 241 41 6 chr2 2946556 2946726 -247741128 - MLT1B LTR MaLR -6 384 209 238 83 0 56 chr2 2946821 2946857 -247740997 - MLT1B LTR MaLR -356 34 1 517 274 148 16 chr2 2947598 2947971 -247739883 + L2 LINE L2 2244 2665 -649 1073 163 24 0 chr2 2949061 2949270 -247738584 + L1MA4 LINE L1 6081 6294 -6 383 200 0 11 chr2 2949278 2949368 -247738486 + GA-rich Low_complexity Low_complexity 3 91 0 396 0 0 0 chr2 2950186 2950230 -247737624 + (TG)n Simple_repeat Simple_repeat 1 44 0 2007 104 54 17 chr2 2951955 2952253 -247735601 - AluY SINE Alu -2 309 1 406 311 67 16 chr2 2953182 2953375 -247734479 - MIR SINE MIR -51 211 9 558 238 41 74 chr2 2953393 2953758 -247734096 - L1MC5 LINE L1 -35 7926 7574 239 253 13 0 chr2 2954363 2954442 -247733412 + GA-rich Low_complexity Low_complexity 1 80 0 544 161 8 15 chr2 2954465 2954595 -247733259 + GA-rich Low_complexity Low_complexity 4 132 0 292 264 56 16 chr2 2955516 2955641 -247732213 + MIR SINE MIR 89 218 -44 249 282 84 0 chr2 2955833 2955904 -247731950 - MIR3 SINE MIR -37 171 95 2314 113 50 14 chr2 2955984 2956346 -247731508 + THE1C LTR MaLR 1 375 0 309 350 122 0 chr2 2956726 2956906 -247730948 + L3 LINE CR1 1284 1485 -92 209 310 11 23 chr2 2957175 2957262 -247730592 + L2 LINE L2 3227 3312 -1 313 308 58 24 chr2 2957522 2957730 -247730124 + L1ME LINE L1 5590 5804 -317 2024 135 0 0 chr2 2957776 2958058 -247729796 + AluSx SINE Alu 1 282 -30 26 30 0 0 chr2 2958254 2958287 -247729567 + AT_rich Low_complexity Low_complexity 1 33 0 218 213 82 0 chr2 2958856 2958917 -247728937 + MIR SINE MIR 107 172 -90 2016 98 10 49 chr2 2959693 2959999 -247727855 - AluSc SINE Alu -15 294 1 2126 133 0 3 chr2 2960957 2961265 -247726589 - AluSg SINE Alu -3 307 1 234 116 0 0 chr2 2961930 2961973 -247725881 + (CA)n Simple_repeat Simple_repeat 2 44 0 1934 80 8 0 chr2 2962000 2962249 -247725605 + AluSp SINE Alu 43 293 -20 255 243 0 43 chr2 2962580 2962650 -247725204 + MIR3 SINE MIR 126 192 -16 406 315 118 0 chr2 2963111 2963314 -247724540 - MIR SINE MIR -28 234 8 794 192 83 33 chr2 2963478 2963718 -247724136 + Charlie5 DNA MER1_type 2334 2585 -27 449 253 59 24 chr2 2965669 2965839 -247722015 + MER5B DNA MER1_type 3 178 0 247 271 52 84 chr2 2969950 2970105 -247717749 + L3 LINE CR1 1426 1575 -2 978 107 0 0 chr2 2970511 2970688 -247717166 + (GA)n Simple_repeat Simple_repeat 2 178 0 637 159 0 12 chr2 2970689 2970859 -247716995 + GA-rich Low_complexity Low_complexity 2 169 0 236 240 10 0 chr2 2970875 2970975 -247716879 + GA-rich Low_complexity Low_complexity 2 102 0 2323 97 0 3 chr2 2973827 2974135 -247713719 - AluSc SINE Alu -2 307 1 218 266 16 0 chr2 2976177 2976259 -247711595 + (TCTCTG)n Simple_repeat Simple_repeat 1 83 0 185 304 38 0 chr2 2976390 2976469 -247711385 - L2 LINE L2 -7 3306 3225 21 0 0 0 chr2 2976509 2976530 -247711324 + AT_rich Low_complexity Low_complexity 1 21 0 1860 144 29 13 chr2 2976531 2976837 -247711017 + AluJo SINE Alu 1 311 -1 451 248 57 0 chr2 2979651 2979756 -247708098 - MER58A DNA MER1_type 0 114 4 711 173 74 20 chr2 2979876 2980078 -247707776 + MER33 DNA MER1_type 21 233 -91 1758 148 184 11 chr2 2980552 2980917 -247706937 - MSTA LTR MaLR 0 428 1 313 226 22 50 chr2 2982920 2983101 -247704753 + (CACTA)n Simple_repeat Simple_repeat 4 179 0 215 277 0 58 chr2 2983077 2983265 -247704589 + (CACTC)n Simple_repeat Simple_repeat 2 178 0 * 240 284 0 62 chr2 2983174 2983350 -247704504 + (CACTT)n Simple_repeat Simple_repeat 3 167 0 * 302 224 18 64 chr2 2983233 2983810 -247704044 + (CACTA)n Simple_repeat Simple_repeat 1 550 0 215 283 6 50 chr2 2984063 2984222 -247703632 + (CACTC)n Simple_repeat Simple_repeat 2 153 0 279 227 0 57 chr2 2984222 2984398 -247703456 + (CTATA)n Simple_repeat Simple_repeat 1 166 0 329 230 0 73 chr2 2984492 2984683 -247703171 + (CTACT)n Simple_repeat Simple_repeat 3 179 0 276 245 0 58 chr2 2984823 2985011 -247702843 + (CTATA)n Simple_repeat Simple_repeat 1 177 0 205 274 0 60 chr2 2985072 2985240 -247702614 + (CTTTA)n Simple_repeat Simple_repeat 5 162 0 394 218 0 52 chr2 2985292 2985466 -247702388 + (CACTA)n Simple_repeat Simple_repeat 3 167 0 1732 167 0 7 chr2 2987312 2987587 -247700267 + AluJb SINE Alu 1 273 -39 180 0 0 0 chr2 2989535 2989555 -247698299 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1067 117 0 0 chr2 2989555 2989700 -247698154 - L1PA10 LINE L1 -19 6149 6005 2253 131 0 0 chr2 2989700 2990035 -247697819 + L1P LINE L1 4681 5015 -1131 2086 133 0 22 chr2 2991784 2992100 -247695754 - AluY SINE Alu -2 309 1 26 74 0 0 chr2 2992573 2992627 -247695227 + AT_rich Low_complexity Low_complexity 1 54 0 192 77 0 0 chr2 2994736 2994762 -247693092 + (TA)n Simple_repeat Simple_repeat 2 27 0 277 301 18 9 chr2 3001850 3001963 -247685891 + GA-rich Low_complexity Low_complexity 1 114 0 24 0 0 0 chr2 3002804 3002828 -247685026 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 3003303 3003325 -247684529 + AT_rich Low_complexity Low_complexity 1 22 0 324 0 0 0 chr2 3006693 3006729 -247681125 + (CA)n Simple_repeat Simple_repeat 2 37 0 302 138 17 0 chr2 3007246 3007304 -247680550 + (TG)n Simple_repeat Simple_repeat 2 60 0 195 42 0 0 chr2 3008205 3008229 -247679625 + (TC)n Simple_repeat Simple_repeat 2 25 0 225 0 0 0 chr2 3008231 3008256 -247679598 + (CA)n Simple_repeat Simple_repeat 1 25 0 226 244 0 0 chr2 3008704 3008749 -247679105 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 192 97 0 0 chr2 3009640 3009671 -247678183 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1501 153 91 28 chr2 3010775 3011062 -247676792 + MER1B DNA MER1_type 35 339 0 26 0 0 0 chr2 3011422 3011448 -247676406 + AT_rich Low_complexity Low_complexity 1 26 0 248 375 0 0 chr2 3011800 3011888 -247675966 + LTR67 LTR ERVL 108 195 -362 753 209 0 0 chr2 3012775 3012909 -247674945 + FRAM SINE Alu 1 129 -47 3477 20 0 0 chr2 3012910 3013312 -247674542 + L1PA4 LINE L1 5752 6153 -2 753 209 0 0 chr2 3013823 3013957 -247673897 + FRAM SINE Alu 1 129 -47 3477 20 0 0 chr2 3013958 3014360 -247673494 + L1PA4 LINE L1 5752 6153 -2 536 34 11 67 chr2 3014439 3014528 -247673326 - L1PA3 LINE L1 -3 6152 6069 281 258 50 17 chr2 3016001 3016121 -247671733 + LTR67 LTR ERVL 434 557 0 306 256 202 8 chr2 3016724 3016853 -247671001 + MER5A DNA MER1_type 36 189 0 607 225 144 32 chr2 3016861 3017024 -247670830 - MER33 DNA MER1_type -2261 324 181 2209 104 3 0 chr2 3017024 3017321 -247670533 - AluSp SINE Alu -15 298 1 2118 122 3 0 chr2 3017321 3017609 -247670245 - AluSg SINE Alu -21 289 1 607 225 144 32 chr2 3017609 3017728 -247670126 - MER33 DNA MER1_type -2403 182 9 296 245 157 20 chr2 3018701 3018803 -247669051 - MIR3 SINE MIR -6 202 87 340 173 0 19 chr2 3018808 3018912 -247668942 + GA-rich Low_complexity Low_complexity 1 102 0 548 295 50 42 chr2 3021030 3021271 -247666583 + MIR SINE MIR 12 254 -8 1331 230 65 68 chr2 3021986 3022704 -247665150 - L1MC5 LINE L1 -697 7264 6542 2057 134 90 3 chr2 3022721 3023056 -247664798 - THE1B LTR MaLR 0 364 1 306 73 0 0 chr2 3023915 3023956 -247663898 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr2 3024851 3024873 -247662981 + AT_rich Low_complexity Low_complexity 1 22 0 36 53 0 0 chr2 3025063 3025120 -247662734 + AT_rich Low_complexity Low_complexity 1 57 0 342 309 26 26 chr2 3027045 3027197 -247660657 - MIR SINE MIR 0 262 111 1740 80 16 0 chr2 3027219 3027569 -247660285 - L1P3 LINE L1 -634 5520 5167 823 30 20 0 chr2 3027571 3027672 -247660182 + L1PA7 LINE L1 6050 6152 -2 25 31 0 0 chr2 3027892 3027924 -247659930 + AT_rich Low_complexity Low_complexity 1 32 0 1049 99 43 0 chr2 3028074 3028215 -247659639 + AluSg/x SINE Alu 154 300 -12 776 256 94 3 chr2 3028758 3029067 -247658787 + L1MD3 LINE L1 7659 7995 0 641 76 11 0 chr2 3029280 3029372 -247658482 + (TTTC)n Simple_repeat Simple_repeat 4 96 0 28 29 0 0 chr2 3029407 3029442 -247658412 + AT_rich Low_complexity Low_complexity 1 35 0 1964 222 0 22 chr2 3030069 3030568 -247657286 + L1PB4 LINE L1 2226 2713 -3433 200 59 29 0 chr2 3030583 3030617 -247657237 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1198 67 6 0 chr2 3030622 3030787 -247657067 - L1PA8A LINE L1 -28 6103 5938 10215 193 29 21 chr2 3030790 3034150 -247653704 + L1PB4 LINE L1 2703 6090 -66 273 172 0 0 chr2 3034202 3034260 -247653594 + L1PB4 LINE L1 6097 6154 -2 256 219 14 14 chr2 3034670 3034743 -247653111 - MLT2E LTR ERVL -525 103 31 616 277 27 31 chr2 3035439 3035663 -247652191 - MIR SINE MIR 0 262 40 3298 183 110 97 chr2 3035787 3036314 -247651540 - L1MC3 LINE L1 -60 7725 7206 248 220 30 40 chr2 3036314 3036414 -247651440 - MLT1F1 LTR MaLR -445 122 24 3298 183 110 97 chr2 3036414 3036454 -247651400 - L1MC3 LINE L1 -579 7206 7168 834 247 70 78 chr2 3036454 3036851 -247651003 + MSTD LTR MaLR 1 394 -2 3298 183 110 97 chr2 3036851 3037422 -247650432 - L1MC3 LINE L1 -617 7168 6499 1563 98 0 9 chr2 3038204 3038428 -247649426 - L1PA8 LINE L1 0 6172 5951 670 279 154 27 chr2 3039009 3039708 -247648146 + HAL1 LINE L1 841 1628 -879 239 0 32 0 chr2 3039719 3039750 -247648104 + (TAGA)n Simple_repeat Simple_repeat 4 35 0 768 311 107 36 chr2 3040205 3041010 -247646844 + HAL1 LINE L1 1646 2507 0 296 311 133 0 chr2 3041473 3041624 -247646230 - MLT1E2 LTR MaLR -144 482 312 623 261 39 93 chr2 3043243 3043599 -247644255 - MER46C DNA MER2_type 0 338 2 240 111 0 0 chr2 3043716 3043752 -247644102 + (CA)n Simple_repeat Simple_repeat 1 36 0 291 122 0 0 chr2 3044934 3044983 -247642871 + (TC)n Simple_repeat Simple_repeat 1 49 0 3128 178 85 15 chr2 3045297 3045531 -247642323 - L1MC1 LINE L1 0 6333 6117 2624 91 31 0 chr2 3045531 3045884 -247641970 + THE1B LTR MaLR 1 364 0 3128 178 85 15 chr2 3045884 3046319 -247641535 - L1MC1 LINE L1 -216 6117 5634 16782 83 4 12 chr2 3046888 3048835 -247639019 - L1PA7 LINE L1 0 6154 4250 1729 81 0 136 chr2 3048835 3049145 -247638709 - AluY SINE Alu 0 311 44 16782 83 4 12 chr2 3049145 3050297 -247637557 - L1PA7 LINE L1 -1904 4250 3090 16872 123 14 21 chr2 3050297 3053042 -247634812 - L1P LINE L1 -2823 3323 598 321 326 7 21 chr2 3053392 3053536 -247634318 - MIR SINE MIR -80 182 41 197 307 0 27 chr2 3053794 3053865 -247633989 + L2 LINE L2 2323 2391 -923 277 241 44 95 chr2 3053865 3054023 -247633831 + MER5A DNA MER1_type 1 150 -39 192 320 153 41 chr2 3054048 3054435 -247633419 + L2 LINE L2 2397 2826 -488 590 203 20 43 chr2 3054890 3055043 -247632811 + THE1C LTR MaLR 1 154 -262 9925 120 53 6 chr2 3055043 3056512 -247631342 + THE1C-int LTR MaLR 42 1579 -1 1706 144 88 31 chr2 3056515 3056868 -247630986 + THE1C LTR MaLR 3 375 0 710 280 77 63 chr2 3057765 3058554 -247629300 + L1M4 LINE L1 2972 3771 -2375 2168 169 40 33 chr2 3058586 3059132 -247628722 + MLT2A2 LTR ERVL 2 554 0 326 263 70 18 chr2 3059320 3059434 -247628420 + HAL1 LINE L1 22 141 -2366 381 302 35 12 chr2 3059615 3059787 -247628067 + HAL1 LINE L1 157 332 -2175 800 310 31 59 chr2 3059835 3060571 -247627283 + L2 LINE L2 2594 3310 -3 634 183 48 22 chr2 3060721 3060860 -247626994 - MLT1E1 LTR MaLR -6 637 406 518 364 113 7 chr2 3060947 3061400 -247626454 - L2 LINE L2 -527 2787 2287 186 337 123 16 chr2 3062185 3062372 -247625482 + L2 LINE L2 1876 2082 -1232 2155 89 13 23 chr2 3062425 3062750 -247625104 - AluY SINE Alu 0 322 1 834 300 77 73 chr2 3063095 3063324 -247624530 + L2 LINE L2 2287 2513 -800 3245 66 0 0 chr2 3063324 3063732 -247624122 - L1PA8 LINE L1 0 6172 5765 834 300 77 73 chr2 3063732 3064177 -247623677 + L2 LINE L2 2513 2955 -358 2423 156 46 2 chr2 3064177 3064587 -247623267 - MSTA LTR MaLR 0 428 1 6317 191 84 44 chr2 3064587 3066104 -247621750 - MSTA-int LTR MaLR 0 1580 3 2579 112 34 53 chr2 3066106 3066486 -247621368 - MSTA LTR MaLR 0 428 55 2271 95 0 46 chr2 3066486 3066811 -247621043 - AluSg SINE Alu 0 310 1 2579 112 34 53 chr2 3066811 3066866 -247620988 - MSTA LTR MaLR -373 55 1 834 300 77 73 chr2 3066866 3067189 -247620665 + L2 LINE L2 2955 3313 0 325 320 39 20 chr2 3067516 3067669 -247620185 + MIR3 SINE MIR 27 182 -26 234 297 138 21 chr2 3068685 3068830 -247619024 - L2 LINE L2 0 3272 3111 262 122 0 0 chr2 3069011 3069052 -247618802 + AluSx SINE Alu 1 41 -260 2060 118 0 0 chr2 3069052 3069324 -247618530 + AluSx SINE Alu 19 290 -22 2255 81 0 0 chr2 3069331 3069654 -247618200 + AluY SINE Alu 9 331 0 1618 150 4 33 chr2 3070281 3070555 -247617299 + AluJo SINE Alu 38 303 -9 1191 209 41 55 chr2 3070587 3070948 -247616906 + MSTB2 LTR MaLR 41 457 0 231 333 0 0 chr2 3072493 3072559 -247615295 - L1MCc LINE L1 -3407 3534 3469 1412 208 19 55 chr2 3072590 3072975 -247614879 - MLT1A2 LTR MaLR -2 465 1 1188 253 65 46 chr2 3073073 3073795 -247614059 - L1MCc LINE L1 -4891 1532 1184 2323 108 0 0 chr2 3073869 3074165 -247613689 - AluSx SINE Alu -16 296 1 239 322 43 9 chr2 3074211 3074326 -247613528 + L1P LINE L1 4099 4217 -1929 22 0 0 0 chr2 3076268 3076290 -247611564 + AT_rich Low_complexity Low_complexity 1 22 0 2289 106 140 11 chr2 3078040 3078419 -247609435 - MSTA LTR MaLR 0 428 1 194 298 113 32 chr2 3079432 3079556 -247608298 + L2 LINE L2 3139 3272 0 653 305 64 54 chr2 3079594 3080017 -247607837 - L2 LINE L2 -2 3311 2885 291 289 33 0 chr2 3080319 3080440 -247607414 + L1ME4a LINE L1 5769 5893 -228 376 332 88 45 chr2 3081366 3081854 -247606000 + HAL1 LINE L1 597 1105 -1402 423 304 175 31 chr2 3081925 3082532 -247605322 + HAL1 LINE L1 1450 2193 -314 1550 193 116 30 chr2 3082532 3082962 -247604892 + MLT1C LTR MaLR 1 467 0 423 304 175 31 chr2 3082962 3083124 -247604730 + HAL1 LINE L1 2193 2330 -177 313 285 39 31 chr2 3083230 3083360 -247604494 - MIR SINE MIR -34 228 98 1231 151 130 50 chr2 3083364 3083663 -247604191 - L1MA6 LINE L1 -366 5934 5612 182 317 17 0 chr2 3083663 3083723 -247604131 - MIR SINE MIR -188 74 14 180 179 0 0 chr2 3083887 3083926 -247603928 + (TG)n Simple_repeat Simple_repeat 1 39 0 264 122 0 0 chr2 3083978 3084019 -247603835 - MADE1 DNA Mariner -39 41 1 910 288 137 24 chr2 3084067 3084650 -247603204 + L1ME3A LINE L1 5522 6170 0 1311 155 132 78 chr2 3084724 3085020 -247602834 + AluJb SINE Alu 1 312 0 326 188 24 47 chr2 3085292 3085377 -247602477 + L1MA4 LINE L1 6211 6293 -7 286 343 10 0 chr2 3087228 3087330 -247600524 - L1MCc LINE L1 -5984 439 337 386 20 0 0 chr2 3088663 3088712 -247599142 - AluY SINE Alu 0 301 253 1144 66 66 0 chr2 3088712 3088864 -247598990 - AluSg/x SINE Alu -20 290 129 2322 95 0 10 chr2 3088882 3089187 -247598667 - AluSx SINE Alu -10 302 1 284 178 27 56 chr2 3089265 3089404 -247598450 + MSR1 Satellite Satellite 1 135 -25 1444 46 0 23 chr2 3089511 3089685 -247598169 - AluY SINE Alu -141 170 1 238 232 18 0 chr2 3089689 3089745 -247598109 + MER3 DNA MER1_type 153 209 0 291 230 0 52 chr2 3090299 3090473 -247597381 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 314 223 0 51 chr2 3090489 3090664 -247597190 + (CCCCAG)n Simple_repeat Simple_repeat 1 166 0 299 236 0 52 chr2 3090717 3090891 -247596963 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 281 119 24 0 chr2 3091033 3091075 -247596779 - AluJ/FLAM SINE Alu -239 63 21 2137 121 0 0 chr2 3091240 3091538 -247596316 + AluSq SINE Alu 1 298 -15 436 262 32 40 chr2 3092239 3092365 -247595489 - MIR3 SINE MIR -70 138 14 226 240 48 67 chr2 3093486 3093590 -247594264 - MSR1 Satellite Satellite 0 111 10 225 303 50 40 chr2 3093612 3093711 -247594143 - MSR1 Satellite Satellite -11 100 1 191 347 53 32 chr2 3094022 3094117 -247593737 + L2 LINE L2 3200 3296 -17 1990 125 3 3 chr2 3095177 3095488 -247592366 - AluJo SINE Alu -1 311 1 2347 59 0 3 chr2 3095795 3096098 -247591756 + AluSq SINE Alu 1 302 -11 1676 73 4 9 chr2 3096100 3096333 -247591521 + AluSg SINE Alu 1 232 -78 540 83 0 0 chr2 3096434 3096506 -247591348 + AluSg SINE Alu 230 301 -9 354 257 115 26 chr2 3096519 3096632 -247591222 - MIR SINE MIR -32 230 108 222 272 71 71 chr2 3096930 3097099 -247590755 + L2 LINE L2 2938 3106 -166 23 62 0 0 chr2 3099061 3099093 -247588761 + GC_rich Low_complexity Low_complexity 1 32 0 581 197 63 0 chr2 3099555 3099682 -247588172 - Charlie1 DNA MER1_type 0 2761 2627 597 237 103 5 chr2 3099684 3099878 -247587976 - Charlie1 DNA MER1_type -2547 214 2 285 98 0 0 chr2 3101856 3101897 -247585957 + (CA)n Simple_repeat Simple_repeat 2 42 0 1450 123 102 0 chr2 3102297 3102388 -247585466 + AluSx SINE Alu 25 105 -207 2012 90 7 0 chr2 3102388 3102665 -247585189 + AluSg SINE Alu 1 279 -31 279 0 0 0 chr2 3102668 3102699 -247585155 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1450 123 102 0 chr2 3102699 3102847 -247585007 + AluSx SINE Alu 106 293 -19 1000 185 158 68 chr2 3102864 3102998 -247584856 + AluJo SINE Alu 1 121 -181 2089 115 3 3 chr2 3102998 3103294 -247584560 + AluSg SINE Alu 1 296 -14 1000 185 158 68 chr2 3103294 3103424 -247584430 + AluJo SINE Alu 121 289 -13 1109 59 0 0 chr2 3103902 3104037 -247583817 + AluSq/x SINE Alu 1 135 -177 1599 134 59 66 chr2 3104037 3104342 -247583512 + AluSx SINE Alu 1 303 -9 2097 91 18 0 chr2 3104344 3104629 -247583225 + AluSq SINE Alu 2 291 -22 1274 138 153 15 chr2 3104648 3104909 -247582945 + AluJo SINE Alu 1 297 -15 347 275 22 11 chr2 3104909 3105000 -247582854 + MIR SINE MIR 59 150 -112 1886 156 0 0 chr2 3105146 3105434 -247582420 + AluJb SINE Alu 1 288 -24 577 248 76 109 chr2 3105547 3105849 -247582005 - L1ME LINE L1 -380 5790 5499 1731 187 74 19 chr2 3105864 3106227 -247581627 - MSTB1 LTR MaLR -6 426 44 3029 56 0 0 chr2 3106227 3106600 -247581254 - L1PA7 LINE L1 0 6154 5782 191 270 95 14 chr2 3106825 3106899 -247580955 - MIR SINE MIR -72 190 111 764 218 98 10 chr2 3107268 3107461 -247580393 - MIR SINE MIR -23 239 30 369 279 165 32 chr2 3107506 3107875 -247579979 - L2 LINE L2 -7 3265 2848 2561 48 0 0 chr2 3109790 3110101 -247577753 - AluY SINE Alu 0 311 1 227 330 50 0 chr2 3110445 3110545 -247577309 + L2 LINE L2 3202 3306 -7 1190 314 66 76 chr2 3112356 3112929 -247574925 - L1M4 LINE L1 -2053 4093 3533 228 111 0 0 chr2 3112929 3112965 -247574889 + (ATG)n Simple_repeat Simple_repeat 2 37 0 1190 314 66 76 chr2 3112965 3113362 -247574492 - L1M4 LINE L1 -2613 3533 3133 22 56 0 0 chr2 3113621 3113657 -247574197 + AT_rich Low_complexity Low_complexity 1 36 0 1040 236 25 22 chr2 3113750 3114068 -247573786 + L1 LINE L1 4304 4622 -1524 319 266 125 80 chr2 3114172 3114352 -247573502 - L1ME LINE L1 -357 5805 5604 1976 106 3 56 chr2 3114352 3114673 -247573181 - AluSg SINE Alu -6 304 1 319 266 125 80 chr2 3114673 3114804 -247573050 - L1ME LINE L1 -558 5604 5480 211 342 13 0 chr2 3115099 3115178 -247572676 + MIR SINE MIR 164 243 -19 22 0 0 0 chr2 3115312 3115334 -247572520 + AT_rich Low_complexity Low_complexity 1 22 0 624 227 51 60 chr2 3116133 3116349 -247571505 + MER20 DNA MER1_type 4 217 -2 433 351 29 40 chr2 3117550 3117929 -247569925 + ERVL LTR ERVL 4945 5319 -445 231 354 0 0 chr2 3118481 3118563 -247569291 + LTR16A LTR ERVL 319 400 -50 495 287 73 67 chr2 3118611 3118939 -247568915 + L1MC/D LINE L1 4039 4368 -1778 270 298 177 6 chr2 3118949 3119107 -247568747 - LTR33 LTR ERVL -8 513 329 429 363 46 31 chr2 3119488 3119813 -247568041 + L1MC/D LINE L1 4507 4836 -1310 719 269 48 35 chr2 3119900 3120127 -247567727 - MIR SINE MIR -7 255 26 25 65 0 0 chr2 3120193 3120239 -247567615 + AT_rich Low_complexity Low_complexity 1 46 0 482 310 25 10 chr2 3120448 3120645 -247567209 + L1MC/D LINE L1 5315 5514 -2294 589 281 45 45 chr2 3120722 3120943 -247566911 + L2 LINE L2 2650 2870 -444 702 245 119 42 chr2 3120971 3121257 -247566597 - L1ME3A LINE L1 -18 6152 5845 1243 191 36 50 chr2 3121861 3122164 -247565690 + AluJo SINE Alu 1 299 -3 5226 30 0 2 chr2 3122561 3123167 -247564687 - L1PA4 LINE L1 -1 6154 5550 1328 111 11 69 chr2 3123277 3123539 -247564315 - L1MA9 LINE L1 0 6312 6066 22 0 0 0 chr2 3123909 3123931 -247563923 + AT_rich Low_complexity Low_complexity 1 22 0 255 330 37 9 chr2 3124084 3124193 -247563661 + MIR SINE MIR 51 162 -100 4403 235 57 35 chr2 3124197 3124420 -247563434 + L1MB8 LINE L1 3722 3939 -2207 207 0 0 0 chr2 3124420 3124443 -247563411 + (TAA)n Simple_repeat Simple_repeat 1 23 0 4403 235 57 35 chr2 3124443 3125706 -247562148 + L1MB8 LINE L1 3939 5240 -906 2018 121 87 98 chr2 3125721 3126159 -247561695 - Tigger2a DNA MER2_type -1 433 1 1956 213 43 20 chr2 3126169 3126676 -247561178 + L1MB8 LINE L1 5293 5811 -367 384 237 34 17 chr2 3126762 3126880 -247560974 + L1MB8 LINE L1 6039 6158 -20 1618 238 8 6 chr2 3126880 3127237 -247560617 + MLT1A1 LTR MaLR 1 358 -7 18974 158 29 69 chr2 3127366 3127743 -247560111 - L1 LINE L1 -3789 3776 3386 189 94 0 0 chr2 3127743 3127775 -247560079 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 18974 158 29 69 chr2 3127775 3128791 -247559063 - L1 LINE L1 -4179 3386 2331 1895 116 25 3 chr2 3128791 3129075 -247558779 + AluSq SINE Alu 1 290 -23 18974 158 29 69 chr2 3129075 3130583 -247557271 - L1 LINE L1 -5234 2331 849 1422 127 19 0 chr2 3130583 3130796 -247557058 + AluSp SINE Alu 89 305 -8 18974 158 29 69 chr2 3130796 3131601 -247556253 - L1 LINE L1 -6716 849 13 777 333 59 100 chr2 3131602 3132411 -247555443 + L1ME3A LINE L1 5394 6169 -1 1101 304 127 22 chr2 3132698 3133484 -247554370 - L2 LINE L2 -665 2649 1781 217 213 21 0 chr2 3133511 3133558 -247554296 + L2 LINE L2 3266 3313 0 1135 175 0 0 chr2 3134253 3134459 -247553395 - AluJb SINE Alu -1 311 106 693 316 98 31 chr2 3134469 3134827 -247553027 + L1ME LINE L1 3369 3750 -2396 37 81 0 0 chr2 3134891 3134977 -247552877 + AT_rich Low_complexity Low_complexity 1 86 0 404 212 16 43 chr2 3135155 3135339 -247552515 + (TA)n Simple_repeat Simple_repeat 2 180 0 1846 261 97 56 chr2 3135358 3135947 -247551907 + L1ME LINE L1 3883 4446 -1700 2228 111 45 31 chr2 3135947 3136306 -247551548 - THE1B LTR MaLR 0 364 1 1846 261 97 56 chr2 3136306 3137153 -247550701 + L1ME LINE L1 4446 5378 -768 328 311 141 32 chr2 3137287 3137564 -247550290 + L1ME LINE L1 2133 2439 -3707 454 279 0 16 chr2 3137564 3137686 -247550168 + L1ME LINE L1 5640 5759 -411 905 257 117 18 chr2 3137907 3138249 -247549605 + L1ME LINE L1 5410 5785 -385 340 206 118 20 chr2 3138578 3138680 -247549174 - HAL1 LINE L1 -1423 1084 973 1384 31 12 0 chr2 3139264 3139426 -247548428 + L1PA5 LINE L1 5984 6147 -7 234 62 0 0 chr2 3140029 3140061 -247547793 + (TG)n Simple_repeat Simple_repeat 1 32 0 183 42 0 0 chr2 3140308 3140332 -247547522 + (TTTTTA)n Simple_repeat Simple_repeat 4 27 0 2133 118 0 17 chr2 3140683 3141044 -247546810 + AluSx SINE Alu 1 356 0 1614 205 69 40 chr2 3141178 3141627 -247546227 - MLT1C LTR MaLR -2 465 4 192 320 13 27 chr2 3142232 3142307 -247545547 - L2 LINE L2 -6 3307 3234 356 319 108 55 chr2 3142707 3143400 -247544454 - L1M4 LINE L1 -3218 2928 2199 4339 189 23 51 chr2 3144104 3144977 -247542877 + L1MA9 LINE L1 4940 5771 -541 270 0 0 0 chr2 3144977 3145007 -247542847 + (CA)n Simple_repeat Simple_repeat 1 30 0 4339 189 23 51 chr2 3145007 3145498 -247542356 + L1MA9 LINE L1 5771 6274 -38 428 289 62 57 chr2 3145872 3146242 -247541612 + LTR16A LTR ERVL 74 445 -5 647 320 42 14 chr2 3146248 3146532 -247541322 + HERV16 LTR ERVL 2 293 -4703 980 212 45 37 chr2 3146667 3146936 -247540918 - MLT1D LTR MaLR 0 505 235 572 324 52 0 chr2 3147103 3147316 -247540538 + HERV16 LTR ERVL 457 680 -4316 1769 312 64 18 chr2 3147420 3148691 -247539163 + HERV16 LTR ERVL 869 2293 -3072 396 0 0 0 chr2 3148691 3148735 -247539119 + (TA)n Simple_repeat Simple_repeat 2 45 0 1769 312 64 18 chr2 3148735 3148910 -247538944 + HERV16 LTR ERVL 2293 2458 -2907 618 142 9 9 chr2 3149010 3149116 -247538738 - MSTC LTR MaLR 0 428 323 12668 107 5 1 chr2 3149225 3150984 -247536870 - L1P3 LINE L1 -4676 1775 28 353 159 52 36 chr2 3150984 3151071 -247536783 - MSTB2 LTR MaLR -352 80 1 4444 210 50 1 chr2 3152163 3153143 -247534711 + L1MCa LINE L1 139 1166 -5260 3827 218 24 47 chr2 3153144 3153725 -247534129 + L1MB8 LINE L1 4597 5189 -989 330 24 0 0 chr2 3153725 3153766 -247534088 + L1PA4 LINE L1 6112 6152 -3 3827 218 24 47 chr2 3153766 3154703 -247533151 + L1MB8 LINE L1 5189 6011 -167 2216 78 0 0 chr2 3154703 3154971 -247532883 + AluY SINE Alu 29 296 -15 3827 218 24 47 chr2 3154971 3155121 -247532733 + L1MB8 LINE L1 6011 6163 -15 295 277 97 52 chr2 3155911 3156178 -247531676 - L2 LINE L2 -13 3300 3022 230 217 0 0 chr2 3156599 3156645 -247531209 + MER103 DNA DNA 9 54 -112 28 0 0 0 chr2 3156942 3156970 -247530884 + AT_rich Low_complexity Low_complexity 1 28 0 5222 0 81 0 chr2 3158059 3158302 -247529552 + L1MC2 LINE L1 5106 5325 -1019 5222 131 46 7 chr2 3158302 3159144 -247528710 + L1MC2 LINE L1 5461 6335 -9 5222 0 81 0 chr2 3159144 3159179 -247528675 + L1MC2 LINE L1 5325 6335 -9 435 342 89 3 chr2 3160666 3160982 -247526872 + HERV16 LTR ERVL 2844 3186 -2578 1186 311 69 56 chr2 3161505 3162423 -247525431 + ERVL LTR ERVL 4474 5403 -361 288 289 0 0 chr2 3162429 3162505 -247525349 + L1MC4 LINE L1 6628 6703 -1339 246 271 38 128 chr2 3163487 3163620 -247524234 + L2 LINE L2 3150 3270 -2 215 305 118 37 chr2 3163617 3163804 -247524050 + L2 LINE L2 2183 2384 -930 * 286 311 91 58 chr2 3164277 3164752 -247523102 + L2 LINE L2 2593 3084 -188 265 313 45 36 chr2 3166115 3166227 -247521627 - L2 LINE L2 -19 3253 3141 302 308 0 0 chr2 3166491 3166595 -247521259 + (CA)n Simple_repeat Simple_repeat 1 104 0 187 338 23 45 chr2 3167028 3167161 -247520693 - L2 LINE L2 -5 3267 3138 237 334 88 50 chr2 3167262 3167879 -247519975 - L2 LINE L2 -191 3081 2444 472 292 45 14 chr2 3167884 3168139 -247519715 + L1ME LINE L1 5329 5588 -574 241 258 34 45 chr2 3168398 3168487 -247519367 + L2 LINE L2 3172 3259 -54 198 71 0 0 chr2 3168505 3168533 -247519321 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 2596 116 28 0 chr2 3169770 3170124 -247517730 + THE1B LTR MaLR 1 364 0 265 293 123 0 chr2 3172322 3172428 -247515426 + L2 LINE L2 3185 3303 -10 1310 162 33 114 chr2 3172791 3173125 -247514729 - AluYb8 SINE Alu -9 309 3 782 158 7 34 chr2 3174979 3175125 -247512729 + L1PB4 LINE L1 6013 6154 -2 4005 256 81 36 chr2 3175153 3175724 -247512130 - L1ME LINE L1 -452 5648 5104 2242 127 0 0 chr2 3175724 3176032 -247511822 - AluSg SINE Alu -2 308 1 4005 256 81 36 chr2 3176032 3177756 -247510098 - L1ME LINE L1 -996 5104 3237 291 286 112 0 chr2 3177945 3178043 -247509811 - MER58 DNA MER1_type -93 122 14 362 291 82 43 chr2 3178078 3178494 -247509360 - L1ME LINE L1 -4137 2124 1693 26 98 0 0 chr2 3178499 3178581 -247509273 + AT_rich Low_complexity Low_complexity 1 82 0 1166 287 84 49 chr2 3178590 3179809 -247508045 - L1ME LINE L1 -4582 1679 378 228 135 0 0 chr2 3180079 3180116 -247507738 + (T)n Simple_repeat Simple_repeat 1 37 0 339 324 7 35 chr2 3180675 3180817 -247507037 - MER5A DNA MER1_type -22 167 30 282 247 74 0 chr2 3182313 3182394 -247505460 - L2 LINE L2 -7 3306 3220 333 0 0 0 chr2 3183560 3183597 -247504257 + (TG)n Simple_repeat Simple_repeat 1 37 0 2193 114 0 7 chr2 3184245 3184551 -247503303 - AluSx SINE Alu -8 304 1 1475 286 97 22 chr2 3184985 3186481 -247501373 - L1ME3A LINE L1 -5 6165 4782 2140 113 0 17 chr2 3186481 3186811 -247501043 - AluSx SINE Alu 0 312 1 3398 165 16 40 chr2 3186820 3187486 -247500368 - L1MA8 LINE L1 -17 6274 5625 1475 286 97 22 chr2 3187486 3187624 -247500230 - L1ME3A LINE L1 -1395 4775 4316 773 134 9 0 chr2 3188630 3188742 -247499112 - THE1B LTR MaLR -188 176 64 2640 107 3 0 chr2 3189584 3189947 -247497907 - THE1B LTR MaLR 0 364 1 197 286 29 14 chr2 3190848 3190918 -247496936 + MIR SINE MIR 21 91 -117 232 325 70 38 chr2 3191172 3191329 -247496525 + MIR SINE MIR 82 243 -19 324 264 8 32 chr2 3191461 3191586 -247496268 + (TATATG)n Simple_repeat Simple_repeat 4 125 0 1292 200 50 126 chr2 3191946 3192207 -247495647 + MLT2B1 LTR ERVL 1 280 -134 239 0 0 31 chr2 3192207 3192239 -247495615 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 1292 200 50 126 chr2 3192239 3192330 -247495524 + MLT2B1 LTR ERVL 280 192 -222 518 15 0 29 chr2 3192330 3192398 -247495456 + (TTTTC)n Simple_repeat Simple_repeat 2 67 0 1292 200 50 126 chr2 3192398 3192603 -247495251 + MLT2B1 LTR ERVL 191 410 -4 23 0 0 29 chr2 3193070 3193090 -247494764 + AT_rich Low_complexity Low_complexity 1 21 -12 1768 155 0 0 chr2 3193090 3193374 -247494480 - AluSg SINE Alu -26 284 1 23 0 0 29 chr2 3193374 3193387 -247494467 + AT_rich Low_complexity Low_complexity 21 33 0 207 69 0 0 chr2 3194218 3194247 -247493607 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 259 367 33 39 chr2 3194931 3195111 -247492743 - L2 LINE L2 0 3272 3094 2229 132 21 34 chr2 3196814 3197194 -247490660 + THE1C LTR MaLR 1 375 0 444 243 33 72 chr2 3197264 3197370 -247490484 - MLT1C LTR MaLR 0 467 358 2500 111 8 3 chr2 3197370 3197723 -247490131 - THE1A LTR MaLR 0 355 1 11399 106 9 5 chr2 3197723 3199297 -247488557 - THE1A-int LTR MaLR 0 1580 1 2580 94 8 3 chr2 3199299 3199650 -247488204 - THE1A LTR MaLR -2 353 1 444 243 33 72 chr2 3199650 3199691 -247488163 - MLT1C LTR MaLR -109 358 322 * 591 162 19 8 chr2 3199686 3199807 -247488047 - MLT1C LTR MaLR -252 138 16 427 213 44 46 chr2 3199981 3200120 -247487734 + L1ME3 LINE L1 6028 6162 0 202 351 57 53 chr2 3200335 3200600 -247487254 - L2 LINE L2 -1 3271 3006 483 221 0 0 chr2 3200686 3200813 -247487041 + (TG)n Simple_repeat Simple_repeat 2 128 0 204 217 67 33 chr2 3202155 3202215 -247485639 - MIR SINE MIR -78 184 123 2305 92 0 0 chr2 3203654 3203959 -247483895 - AluY SINE Alu -6 305 1 2348 113 158 0 chr2 3205223 3205654 -247482200 - LTR19A LTR ERV1 -4 482 1 224 209 75 45 chr2 3207498 3207565 -247480289 - L3 LINE CR1 -123 1454 1386 * 509 286 91 0 chr2 3207553 3207728 -247480126 + MIR SINE MIR 72 262 0 243 237 21 72 chr2 3207758 3207855 -247479999 - L3 LINE CR1 -205 1372 1281 2372 208 19 21 chr2 3207975 3208443 -247479411 - MLT2B1 LTR ERVL -2 518 52 1994 173 59 50 chr2 3208443 3208864 -247478990 - MSTB1 LTR MaLR -2 430 6 255 146 0 0 chr2 3208860 3208901 -247478953 - MLT2B1 LTR ERVL -456 59 19 * 220 312 117 85 chr2 3208906 3209342 -247478512 + L2 LINE L2 1563 2012 -1302 573 252 15 7 chr2 3209396 3209531 -247478323 - MLT1B LTR MaLR 0 390 255 587 322 150 38 chr2 3209992 3210385 -247477469 - L2 LINE L2 -444 2870 2522 1342 243 32 42 chr2 3210385 3210785 -247477069 + MSTD LTR MaLR 1 396 0 587 322 150 38 chr2 3210785 3211435 -247476419 - L2 LINE L2 -792 2522 1710 478 300 19 6 chr2 3211573 3211733 -247476121 + LTR16A LTR ERVL 105 266 -184 180 356 17 69 chr2 3212674 3212848 -247475006 + L2 LINE L2 3149 3313 0 1921 99 11 0 chr2 3214031 3214294 -247473560 - AluSx SINE Alu -5 307 42 201 243 0 0 chr2 3214465 3214502 -247473352 + MIR3 SINE MIR 120 156 -52 254 265 166 13 chr2 3215824 3215929 -247471925 - MIR SINE MIR -46 162 46 182 318 12 24 chr2 3217037 3217122 -247470732 + MIR SINE MIR 63 146 -116 214 282 130 92 chr2 3217812 3217943 -247469911 + MIR SINE MIR 53 188 -74 293 284 23 23 chr2 3219006 3219094 -247468760 + MER5A DNA MER1_type 22 109 -80 225 228 51 165 chr2 3220037 3220195 -247467659 + MIR SINE MIR 80 219 -43 201 196 0 0 chr2 3220472 3220518 -247467336 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 473 250 0 12 chr2 3220571 3220739 -247467115 + (TCCA)n Simple_repeat Simple_repeat 2 167 0 662 211 6 0 chr2 3220770 3220945 -247466909 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 610 248 8 0 chr2 3220994 3221263 -247466591 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 314 304 26 26 chr2 3221333 3221448 -247466406 + MIR3 SINE MIR 94 208 0 462 271 65 7 chr2 3221690 3221845 -247466009 - MIR SINE MIR -60 202 39 23 33 0 0 chr2 3222316 3222346 -247465508 + AT_rich Low_complexity Low_complexity 1 30 0 203 185 0 19 chr2 3222470 3222524 -247465330 + (CA)n Simple_repeat Simple_repeat 1 53 0 270 160 0 0 chr2 3222980 3223030 -247464824 + (CA)n Simple_repeat Simple_repeat 1 50 0 315 312 75 45 chr2 3225314 3225622 -247462232 + L2 LINE L2 1891 2207 -1107 293 358 8 8 chr2 3225942 3226065 -247461789 - MIR SINE MIR -67 141 19 1257 157 138 46 chr2 3229952 3230213 -247457641 - AluJb SINE Alu -25 287 3 2566 111 6 3 chr2 3230672 3231034 -247456820 + THE1B LTR MaLR 2 364 0 229 237 37 89 chr2 3231324 3231459 -247456395 + L1ME LINE L1 5618 5745 -376 358 311 94 32 chr2 3231719 3231996 -247455858 - L1ME LINE L1 -345 5776 5483 2484 242 41 28 chr2 3232110 3232816 -247455038 - L1ME1 LINE L1 -4 6162 5448 1957 123 3 3 chr2 3233392 3233701 -247454153 - AluSx SINE Alu 0 309 1 260 327 109 25 chr2 3234828 3235030 -247452824 - L3 LINE CR1 -348 1229 1011 192 40 0 0 chr2 3235624 3235649 -247452205 + (TCTG)n Simple_repeat Simple_repeat 3 27 0 180 0 0 0 chr2 3235672 3235692 -247452162 + (TCTG)n Simple_repeat Simple_repeat 4 23 0 216 0 0 0 chr2 3235786 3235810 -247452044 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 460 296 24 18 chr2 3236581 3236750 -247451104 + MER5A DNA MER1_type 8 177 -12 234 253 13 25 chr2 3237139 3237218 -247450636 + MER94 DNA DNA 1 78 -56 333 299 16 16 chr2 3237411 3237538 -247450316 + MER94 DNA DNA 1 127 -7 202 274 0 20 chr2 3239102 3239153 -247448701 + GA-rich Low_complexity Low_complexity 2 51 0 459 287 39 60 chr2 3240631 3240913 -247446941 - MLT1J LTR MaLR -235 276 1 188 267 50 0 chr2 3241169 3241229 -247446625 + MIR SINE MIR 53 115 -147 233 146 0 0 chr2 3241524 3241565 -247446289 - MSTB LTR MaLR 0 426 386 2097 76 8 0 chr2 3241567 3241830 -247446024 + AluSq SINE Alu 33 297 -16 321 305 195 0 chr2 3242686 3242804 -247445050 - MER5A DNA MER1_type -3 186 46 678 246 66 6 chr2 3242828 3243011 -247444843 + MER58C DNA MER1_type 21 214 -1 2344 97 3 0 chr2 3243142 3243265 -247444589 + AluSp SINE Alu 1 122 -191 577 0 27 0 chr2 3243265 3243338 -247444516 + (TAAAA)n Simple_repeat Simple_repeat 2 76 0 2344 97 3 0 chr2 3243338 3243513 -247444341 + AluSp SINE Alu 122 300 -13 271 183 29 19 chr2 3243616 3243720 -247444134 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 221 94 47 47 chr2 3243790 3243854 -247444000 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 1099 264 72 14 chr2 3243889 3244305 -247443549 - MER92C LTR ERV1 -8 546 107 289 296 173 37 chr2 3245980 3246142 -247441712 + MER5A DNA MER1_type 4 187 -2 180 274 65 48 chr2 3246844 3246906 -247440948 + MIR3 SINE MIR 107 169 -39 181 256 0 23 chr2 3247244 3247287 -247440567 + L2 LINE L2 3263 3304 -9 1429 178 71 32 chr2 3247474 3247853 -247440001 - Tigger2 DNA MER2_type 0 2718 4 2185 152 33 31 chr2 3247905 3248454 -247439400 - MLT2A2 LTR ERVL 0 554 1 249 98 0 0 chr2 3248844 3248885 -247438969 + (GCTG)n Simple_repeat Simple_repeat 4 44 0 323 319 17 9 chr2 3248948 3249064 -247438790 + MIR SINE MIR 82 198 -64 183 156 0 0 chr2 3250324 3250356 -247437498 + (ATGGTG)n Simple_repeat Simple_repeat 6 37 0 2068 116 141 0 chr2 3250536 3250906 -247436948 - MSTA LTR MaLR 0 428 7 8623 170 37 8 chr2 3250912 3252502 -247435352 - MSTA-int LTR MaLR -14 1637 1 2200 158 94 5 chr2 3252502 3252895 -247434959 - MSTA LTR MaLR 0 428 1 317 333 52 82 chr2 3252895 3253162 -247434692 - L1MEd LINE L1 -4097 2213 1955 5858 138 1 2 chr2 3253172 3254306 -247433548 + L1PA13 LINE L1 5024 6163 0 522 306 113 63 chr2 3254453 3255181 -247432673 - L1MEd LINE L1 -795 1695 928 37 62 0 0 chr2 3255181 3255246 -247432608 + AT_rich Low_complexity Low_complexity 1 65 0 1001 171 57 5 chr2 3255261 3255409 -247432445 - L1MA9 LINE L1 0 6312 6148 294 29 0 0 chr2 3255409 3255444 -247432410 + (TG)n Simple_repeat Simple_repeat 2 36 0 1001 171 57 5 chr2 3255444 3255505 -247432349 - L1MA9 LINE L1 -164 6148 6092 657 209 36 0 chr2 3255515 3255654 -247432200 - FRAM SINE Alu -32 144 1 2306 167 48 74 chr2 3255655 3256215 -247431639 - L1MA9 LINE L1 -201 6111 5567 306 301 195 16 chr2 3256220 3256466 -247431388 - L1MEd LINE L1 -5233 886 597 664 266 112 33 chr2 3257582 3257743 -247430111 - MLT1C LTR MaLR 0 467 320 1260 225 63 42 chr2 3257743 3258121 -247429733 + MLT1B LTR MaLR 5 390 0 664 266 112 33 chr2 3258121 3258364 -247429490 - MLT1C LTR MaLR -147 320 22 203 337 20 41 chr2 3258588 3258686 -247429168 + MIR3 SINE MIR 105 200 -8 193 290 32 32 chr2 3258914 3258976 -247428878 + L2 LINE L2 3232 3293 -20 641 261 78 78 chr2 3260045 3260428 -247427426 + MLT1C LTR MaLR 1 383 -84 325 336 38 0 chr2 3260689 3260820 -247427034 + MIR SINE MIR 118 253 -9 185 324 29 10 chr2 3260936 3261038 -247426816 - MIR SINE MIR -131 131 28 2247 110 10 10 chr2 3261346 3261656 -247426198 - AluSp SINE Alu -3 310 1 227 260 0 60 chr2 3262260 3262360 -247425494 + (CAGG)n Simple_repeat Simple_repeat 3 96 0 354 281 0 62 chr2 3262380 3262558 -247425296 + (CAGG)n Simple_repeat Simple_repeat 2 168 0 441 182 13 7 chr2 3263976 3264130 -247423724 + (CA)n Simple_repeat Simple_repeat 1 155 0 1052 247 115 20 chr2 3264161 3264517 -247423337 + MLT1B LTR MaLR 1 390 0 206 242 15 30 chr2 3265494 3265560 -247422294 + MIR SINE MIR 86 150 -58 197 208 0 130 chr2 3265561 3265638 -247422216 + MER5A DNA MER1_type 33 99 -90 296 333 199 20 chr2 3267094 3267497 -247420357 - L2 LINE L2 -13 3300 2826 252 258 32 11 chr2 3270676 3270769 -247417085 + C-rich Low_complexity Low_complexity 5 99 0 464 79 87 24 chr2 3271300 3271794 -247416060 + (CA)n Simple_repeat Simple_repeat 1 524 0 386 186 48 9 chr2 3271818 3272286 -247415568 + (CA)n Simple_repeat Simple_repeat 1 486 0 253 197 45 0 chr2 3272300 3272366 -247415488 + (CA)n Simple_repeat Simple_repeat 2 70 0 416 143 65 0 chr2 3272385 3272539 -247415315 + (CA)n Simple_repeat Simple_repeat 1 164 0 426 148 63 56 chr2 3272581 3273198 -247414656 + (ATGGTG)n Simple_repeat Simple_repeat 1 621 0 318 185 0 0 chr2 3274420 3274474 -247413380 - MER63 DNA MER1_type -24 1037 984 * 522 175 167 0 chr2 3274472 3274586 -247413268 - MER63 DNA MER1_type -302 760 2 240 281 89 44 chr2 3275193 3275328 -247412526 + L2 LINE L2 3132 3272 0 267 140 0 0 chr2 3275472 3275522 -247412332 + (GGGGA)n Simple_repeat Simple_repeat 2 51 0 261 0 0 0 chr2 3275771 3275800 -247412054 + (CA)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr2 3276986 3277014 -247410840 + AT_rich Low_complexity Low_complexity 1 28 0 222 347 0 0 chr2 3277023 3277095 -247410759 + (CATATA)n Simple_repeat Simple_repeat 6 77 0 697 248 72 33 chr2 3277265 3277572 -247410282 + L1MD2 LINE L1 4965 5283 -863 * 968 285 94 79 chr2 3277570 3277964 -247409890 + L1MD2 LINE L1 5560 5946 -413 2535 87 0 3 chr2 3277964 3278275 -247409579 - AluSx SINE Alu -2 310 1 968 285 94 79 chr2 3278275 3278655 -247409199 + L1MD2 LINE L1 5946 6346 -13 297 255 131 41 chr2 3280946 3281091 -247406763 - MER5B DNA MER1_type -18 160 3 263 259 108 86 chr2 3281113 3281252 -247406602 - MIR SINE MIR -112 150 9 1693 160 10 7 chr2 3282225 3282518 -247405336 + MER49 LTR ERV1 1 294 -629 6660 91 11 0 chr2 3282577 3283687 -247404167 + L1PA10 LINE L1 5046 6164 -4 1373 204 36 24 chr2 3283700 3284033 -247403821 + MER4D LTR ERV1 567 903 0 187 28 56 28 chr2 3285251 3285287 -247402567 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 281 290 133 10 chr2 3285491 3285614 -247402240 - MER5A DNA MER1_type -10 179 27 218 311 125 25 chr2 3285650 3285875 -247401979 + MIR SINE MIR 8 262 0 237 33 0 0 chr2 3286200 3286230 -247401624 + (TG)n Simple_repeat Simple_repeat 2 31 0 1889 181 0 7 chr2 3286452 3286756 -247401098 + AluJb SINE Alu 1 302 -10 230 71 0 0 chr2 3287610 3287638 -247400216 + LTR47A LTR ERVL 4 31 -421 1980 161 130 3 chr2 3287638 3288022 -247399832 + LTR47A LTR ERVL 4 436 -16 18749 168 60 13 chr2 3289330 3293110 -247394744 + L1M1 LINE L1 19 3619 -4105 1011 23 0 38 chr2 3293110 3293241 -247394613 - L1PA6 LINE L1 -7 6147 6022 18749 168 60 13 chr2 3293241 3294167 -247393687 + L1M1 LINE L1 3619 4500 -3224 2171 118 3 0 chr2 3294167 3294473 -247393381 + AluSq SINE Alu 1 307 -6 18749 168 60 13 chr2 3294473 3296420 -247391434 + L1M1 LINE L1 4500 6983 -741 445 241 19 86 chr2 3296443 3296550 -247391304 + MLT1F1 LTR MaLR 407 502 -65 2206 92 0 0 chr2 3296550 3296859 -247390995 - AluSg SINE Alu 0 309 1 445 241 19 86 chr2 3296859 3296912 -247390942 + MLT1F1 LTR MaLR 502 557 -10 353 275 84 41 chr2 3296935 3297156 -247390698 + MIR SINE MIR 20 249 -13 452 335 180 12 chr2 3297786 3298108 -247389746 + L3 LINE CR1 1114 1489 -88 297 310 90 21 chr2 3299752 3299897 -247387957 - MIR SINE MIR -52 210 56 665 256 61 22 chr2 3299930 3300110 -247387744 - MER5A DNA MER1_type -2 187 1 228 86 0 0 chr2 3300652 3300687 -247387167 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1783 195 14 24 chr2 3301525 3301895 -247385959 - MER47A DNA MER2_type 0 366 1 1492 151 3 56 chr2 3301902 3302034 -247385820 + MER2 DNA MER2_type 2 113 -232 1320 199 34 21 chr2 3302034 3302325 -247385529 - AluJb SINE Alu -17 295 1 1492 151 3 56 chr2 3302325 3302476 -247385378 + MER2 DNA MER2_type 113 270 -75 641 327 154 34 chr2 3302591 3303692 -247384162 + L2 LINE L2 1744 2977 -337 2300 106 0 0 chr2 3308064 3308375 -247379479 - AluSx SINE Alu -1 311 1 1357 276 52 30 chr2 3308597 3309057 -247378797 + MLT1J LTR MaLR 23 492 -19 245 300 132 41 chr2 3309082 3309302 -247378552 - L2 LINE L2 -129 3184 2945 378 0 0 0 chr2 3309934 3309976 -247377878 + (CA)n Simple_repeat Simple_repeat 1 42 0 1633 213 20 20 chr2 3309977 3310324 -247377530 + MER7A DNA MER2_type 2 346 0 2429 150 33 17 chr2 3312060 3312479 -247375375 + MSTA LTR MaLR 1 426 -2 410 293 61 50 chr2 3313200 3313296 -247374558 - MIR SINE MIR -19 243 149 2266 84 3 0 chr2 3313296 3313593 -247374261 - AluSp SINE Alu -14 299 2 410 293 61 50 chr2 3313593 3313694 -247374160 - MIR SINE MIR -113 149 44 641 311 48 32 chr2 3315121 3315369 -247372485 + MIR SINE MIR 8 259 -3 391 204 23 11 chr2 3315369 3315457 -247372397 + MLT1A1 LTR MaLR 1 89 -276 269 200 9 29 chr2 3315670 3315775 -247372079 + (TG)n Simple_repeat Simple_repeat 2 104 0 344 242 7 39 chr2 3315800 3316223 -247371631 + (TG)n Simple_repeat Simple_repeat 1 409 0 311 281 149 9 chr2 3317988 3318209 -247369645 + L1ME LINE L1 5097 5348 -798 249 310 120 37 chr2 3318215 3318515 -247369339 + L1ME LINE L1 5368 5692 -429 633 316 24 14 chr2 3318571 3318783 -247369071 - L2 LINE L2 0 3313 3100 237 189 117 99 chr2 3318958 3319069 -247368785 + L1ME4a LINE L1 5973 6085 -36 18364 62 10 17 chr2 3324098 3326420 -247361434 + HERVL LTR ERVL 3105 5410 -244 707 261 123 22 chr2 3326588 3327001 -247360853 - MLT1C LTR MaLR -12 455 1 2093 139 126 23 chr2 3327530 3327918 -247359936 + MSTA LTR MaLR 1 428 0 8332 157 26 51 chr2 3327920 3329539 -247358315 + MSTA-int LTR MaLR 3 1580 0 1604 162 184 11 chr2 3329539 3329904 -247357950 + MSTA LTR MaLR 1 428 0 392 267 18 0 chr2 3331801 3332266 -247355588 + (CA)n Simple_repeat Simple_repeat 1 473 0 233 274 171 17 chr2 3332697 3332814 -247355040 - MIR SINE MIR -5 257 123 201 312 17 0 chr2 3333558 3333651 -247354203 - MIR SINE MIR -56 152 58 401 313 72 6 chr2 3334053 3334219 -247353635 - MIR SINE MIR -33 229 53 3475 216 71 25 chr2 3334549 3335534 -247352320 + L1MC3 LINE L1 6748 7777 -8 2205 104 139 11 chr2 3335656 3336031 -247351823 + MSTA LTR MaLR 6 428 0 794 50 0 0 chr2 3337554 3337655 -247350199 + HERVL-A1 LTR ERVL 5554 5654 0 2575 106 20 40 chr2 3337656 3338108 -247349746 + MLT2A1 LTR ERVL 2 444 0 1901 135 46 0 chr2 3339219 3339501 -247348353 + AluSq SINE Alu 1 295 -18 1030 303 157 35 chr2 3340267 3341128 -247346726 - L2 LINE L2 -1627 1687 722 351 269 23 110 chr2 3341172 3341436 -247346418 - L2 LINE L2 -2764 550 310 2292 74 0 7 chr2 3343088 3343371 -247344483 - AluY SINE Alu -10 301 21 196 337 11 11 chr2 3343646 3343735 -247344119 - L3 LINE CR1 -144 1433 1345 416 298 51 28 chr2 3344277 3344455 -247343399 + MIR SINE MIR 61 242 -20 249 217 16 71 chr2 3345275 3345459 -247342395 + (CA)n Simple_repeat Simple_repeat 1 174 0 392 199 11 72 chr2 3345859 3346040 -247341814 + (CA)n Simple_repeat Simple_repeat 1 170 0 433 274 17 23 chr2 3346078 3346253 -247341601 + (CA)n Simple_repeat Simple_repeat 2 175 0 2263 121 0 3 chr2 3347888 3348194 -247339660 - AluSx SINE Alu -7 305 1 283 258 75 21 chr2 3348896 3348989 -247338865 + MIR SINE MIR 103 200 -62 260 310 34 54 chr2 3352265 3352562 -247335292 - L2 LINE L2 -78 3235 2945 2334 78 29 13 chr2 3352570 3352876 -247334978 + AluY SINE Alu 1 311 0 358 326 228 12 chr2 3352897 3353462 -247334392 - L2 LINE L2 -911 2403 1717 796 262 5 0 chr2 3353966 3354157 -247333697 + MLT1A1 LTR MaLR 172 363 -2 8427 178 30 46 chr2 3354244 3357263 -247330591 + L1MA8 LINE L1 3319 6286 -5 27 0 0 0 chr2 3357264 3357291 -247330563 + AT_rich Low_complexity Low_complexity 1 27 0 290 228 40 40 chr2 3358345 3358446 -247329408 - MER45 DNA AcHobo -1439 142 42 625 169 23 31 chr2 3359267 3359331 -247328523 + MER45A DNA AcHobo 42 105 -1476 2262 115 0 3 chr2 3359331 3359627 -247328227 - AluSq SINE Alu -18 295 1 625 169 23 31 chr2 3359627 3359692 -247328162 + MER45A DNA AcHobo 105 170 -8 233 338 15 0 chr2 3359712 3359780 -247328074 + MIR3 SINE MIR 103 171 -37 287 193 102 45 chr2 3360074 3360162 -247327692 + MIR SINE MIR 108 200 -62 2647 68 0 0 chr2 3360224 3360533 -247327321 - AluY SINE Alu -1 310 2 759 333 36 45 chr2 3360631 3361437 -247326417 + L1MEc LINE L1 388 1186 -5377 3892 181 74 9 chr2 3361438 3362392 -247325462 + L1MB3 LINE L1 5165 6182 -1 423 184 34 54 chr2 3362399 3362546 -247325308 + L1MEc LINE L1 1178 1321 -5242 317 333 78 29 chr2 3362576 3362780 -247325074 + L1MEc LINE L1 1277 1490 -4894 333 283 87 46 chr2 3363063 3363282 -247324572 + L1ME LINE L1 5558 5785 -336 1715 175 0 31 chr2 3363338 3363673 -247324181 - AluJb SINE Alu 0 326 1 207 0 0 0 chr2 3364251 3364274 -247323580 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 21 82 0 0 chr2 3364941 3364990 -247322864 + AT_rich Low_complexity Low_complexity 1 49 0 2621 257 26 57 chr2 3365170 3365237 -247322617 - MER63C DNA MER1_type -138 922 854 2149 125 7 3 chr2 3365237 3365534 -247322320 - AluSq SINE Alu -15 298 1 2621 257 26 57 chr2 3365534 3366189 -247321665 - MER63C DNA MER1_type -206 854 233 710 208 19 19 chr2 3366189 3366348 -247321506 - L1MC1 LINE L1 0 6333 6175 2621 257 26 57 chr2 3366348 3366571 -247321283 - MER63C DNA MER1_type -827 233 5 294 73 0 0 chr2 3366793 3366834 -247321020 + (TTGG)n Simple_repeat Simple_repeat 2 42 0 219 286 52 45 chr2 3366893 3367047 -247320807 + L2 LINE L2 2898 3052 -220 1698 264 146 26 chr2 3367686 3368014 -247319840 - L1ME3A LINE L1 -1 6169 5882 4277 101 28 2 chr2 3368014 3368657 -247319197 - MER4A LTR ERV1 -2 662 3 1698 264 146 26 chr2 3368657 3369181 -247318673 - L1ME3A LINE L1 -288 5882 5187 302 313 76 8 chr2 3369298 3369429 -247318425 - MIR SINE MIR -91 171 32 256 289 19 48 chr2 3369748 3369852 -247318002 - L2 LINE L2 -95 3218 3118 200 258 17 146 chr2 3369884 3370062 -247317792 - L2 LINE L2 -201 3071 2917 409 261 112 63 chr2 3370126 3370599 -247317255 + MLT1H LTR MaLR 4 540 -9 351 113 0 0 chr2 3370691 3370744 -247317110 + (T)n Simple_repeat Simple_repeat 1 53 0 205 324 0 0 chr2 3371061 3371135 -247316719 + (CCCA)n Simple_repeat Simple_repeat 2 75 0 1482 326 163 17 chr2 3371135 3372397 -247315457 + L2 LINE L2 1478 2923 -391 2647 71 0 0 chr2 3372397 3372707 -247315147 + AluY SINE Alu 1 310 -1 209 269 171 23 chr2 3373929 3374104 -247313750 + L2 LINE L2 3113 3313 0 241 267 58 12 chr2 3375430 3375516 -247312338 - MIR SINE MIR -68 140 51 267 143 0 0 chr2 3375656 3375698 -247312156 - 5S rRNA rRNA -79 42 1 410 177 13 0 chr2 3375962 3376041 -247311813 + MADE1 DNA Mariner 1 80 0 192 125 0 0 chr2 3376175 3376207 -247311647 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 231 173 0 0 chr2 3376370 3376422 -247311432 + (CA)n Simple_repeat Simple_repeat 1 52 0 227 143 41 0 chr2 3376552 3376601 -247311253 + A-rich Low_complexity Low_complexity 2 52 0 191 234 64 0 chr2 3378696 3378743 -247309111 - L2 LINE L2 -11 3302 3253 1617 182 23 28 chr2 3378792 3379144 -247308710 - L1MB2 LINE L1 0 6171 5822 355 194 0 0 chr2 3379151 3379223 -247308631 - L1MB2 LINE L1 -666 5517 5446 219 358 0 0 chr2 3380057 3380138 -247307716 + MIR SINE MIR 56 136 -72 23 0 0 0 chr2 3380894 3380917 -247306937 + AT_rich Low_complexity Low_complexity 1 23 0 267 342 43 0 chr2 3384684 3384801 -247303053 - MIR SINE MIR -108 154 33 2314 114 0 0 chr2 3385064 3385363 -247302491 - AluSg SINE Alu -11 299 1 421 208 37 34 chr2 3385562 3385884 -247301970 + (TG)n Simple_repeat Simple_repeat 1 323 0 1010 282 59 9 chr2 3386116 3386538 -247301316 - L1MB2 LINE L1 -1213 4933 4491 909 321 23 19 chr2 3386557 3387034 -247300820 - L1MB2 LINE L1 -2318 3828 3350 303 316 83 30 chr2 3387051 3387184 -247300670 - L1MB2 LINE L1 -3895 2251 2112 1118 279 113 33 chr2 3387196 3387683 -247300171 - LTR41 LTR ERVL -15 758 233 890 275 93 7 chr2 3387798 3388089 -247299765 - LTR41 LTR ERVL -457 316 1 2576 78 28 11 chr2 3388203 3388561 -247299293 - L1PA8 LINE L1 -13 6159 5796 544 324 105 42 chr2 3388845 3389342 -247298512 - L1MEc LINE L1 -4431 2150 1544 2057 126 7 0 chr2 3389342 3389651 -247298203 - AluSx SINE Alu -1 311 1 544 324 105 42 chr2 3389651 3389924 -247297930 - L1MEc LINE L1 -5037 1544 1290 1213 219 33 91 chr2 3390516 3390566 -247297288 + MLT1A2 LTR MaLR 1 52 -322 2211 102 0 7 chr2 3390566 3390869 -247296985 - AluSq SINE Alu 0 313 13 1213 219 33 91 chr2 3390869 3391215 -247296639 + MLT1A2 LTR MaLR 52 374 0 211 286 95 29 chr2 3393587 3393692 -247294162 + MIR3 SINE MIR 49 160 -48 23 0 0 0 chr2 3394006 3394029 -247293825 + AT_rich Low_complexity Low_complexity 1 23 0 317 235 88 0 chr2 3394029 3394131 -247293723 - L1MA9 LINE L1 -22 6290 6180 1700 205 57 8 chr2 3394137 3394415 -247293439 - L1MA9 LINE L1 -235 6077 5775 225 83 0 0 chr2 3394415 3394451 -247293403 + (TG)n Simple_repeat Simple_repeat 1 36 0 1700 205 57 8 chr2 3394451 3394542 -247293312 - L1MA9 LINE L1 -537 5775 5690 312 153 53 38 chr2 3395114 3395245 -247292609 + (AGTTG)n Simple_repeat Simple_repeat 3 135 0 1201 240 53 120 chr2 3395420 3396025 -247291829 - MLT1E1 LTR MaLR 0 637 92 189 340 20 30 chr2 3396308 3396408 -247291446 - MIR SINE MIR -62 146 48 2114 122 0 10 chr2 3396677 3396981 -247290873 - AluSx SINE Alu -9 303 3 279 322 0 11 chr2 3398413 3398500 -247289354 + MIR3 SINE MIR 117 202 -6 487 157 24 0 chr2 3398528 3398611 -247289243 - L1MB5 LINE L1 -12 6162 6078 1444 136 9 5 chr2 3400449 3400669 -247287185 + AluSq SINE Alu 71 291 -22 899 248 17 8 chr2 3401153 3401387 -247286467 + MLT1D LTR MaLR 7 242 -263 473 311 54 11 chr2 3402185 3402445 -247285409 - MER90 LTR ERV1 -210 404 134 216 200 0 0 chr2 3402844 3402909 -247284945 + GA-rich Low_complexity Low_complexity 2 66 0 184 79 48 48 chr2 3404298 3404361 -247283493 + (CAA)n Simple_repeat Simple_repeat 3 65 0 292 205 26 45 chr2 3404361 3404517 -247283337 + (CACAC)n Simple_repeat Simple_repeat 1 153 0 207 62 62 31 chr2 3404553 3404618 -247283236 + (CACAA)n Simple_repeat Simple_repeat 5 71 0 224 130 48 48 chr2 3404729 3404875 -247282979 + (CACAA)n Simple_repeat Simple_repeat 2 147 0 285 255 157 24 chr2 3405787 3406024 -247281830 + MLT1J1 LTR MaLR 19 296 -154 196 298 48 48 chr2 3406528 3406632 -247281222 + L2 LINE L2 3208 3311 -2 201 313 12 0 chr2 3407033 3407113 -247280741 - MIR SINE MIR 0 262 182 197 358 0 15 chr2 3407124 3407191 -247280663 - MIR SINE MIR -181 81 16 1519 197 122 22 chr2 3408190 3408550 -247279304 - MSTD LTR MaLR 0 396 1 852 108 7 40 chr2 3409787 3409935 -247277919 - FLAM_C SINE Alu 0 143 1 962 156 6 19 chr2 3410163 3410323 -247277531 + L1PA8A LINE L1 5971 6128 -3 1589 277 47 38 chr2 3410832 3411409 -247276445 + MLT1E LTR MaLR 10 591 -2 368 265 0 6 chr2 3413885 3414055 -247273799 + C-rich Low_complexity Low_complexity 4 172 0 294 138 50 12 chr2 3414058 3414138 -247273716 + CT-rich Low_complexity Low_complexity 3 85 0 2072 137 42 31 chr2 3414218 3414577 -247273277 + THE1B LTR MaLR 1 363 -1 250 242 30 0 chr2 3414941 3415007 -247272847 + L2 LINE L2 2987 3054 -218 191 244 22 0 chr2 3415073 3415118 -247272736 + L2 LINE L2 3223 3268 -4 375 289 97 50 chr2 3417115 3417496 -247270358 + HAL1 LINE L1 1 399 -2108 1057 222 31 13 chr2 3417837 3418062 -247269792 - MER101B LTR ERV1 -341 229 1 374 366 79 9 chr2 3418075 3418403 -247269451 + HAL1 LINE L1 491 841 -1666 461 205 252 0 chr2 3419147 3419264 -247268590 + MLT2D LTR ERVL 226 312 -102 198 0 0 0 chr2 3419264 3419286 -247268568 + (TC)n Simple_repeat Simple_repeat 1 22 0 461 205 252 0 chr2 3419286 3419319 -247268535 + MLT2D LTR ERVL 312 414 0 471 240 0 0 chr2 3420243 3420339 -247267515 - L1MA7 LINE L1 -186 6105 6010 629 183 41 41 chr2 3420342 3420511 -247267343 + L1MA7 LINE L1 6123 6291 0 198 209 47 0 chr2 3421131 3421174 -247266680 - MIR SINE MIR -111 151 107 249 326 38 15 chr2 3422566 3422698 -247265156 + L1ME LINE L1 5634 5768 -353 2303 102 0 6 chr2 3422935 3423249 -247264605 + AluSx SINE Alu 1 312 0 254 284 69 35 chr2 3423715 3423831 -247264023 + MIR3 SINE MIR 62 181 -27 193 231 123 15 chr2 3425147 3425212 -247262642 - MIR SINE MIR -118 144 73 216 0 0 0 chr2 3426706 3426730 -247261124 + (GGATG)n Simple_repeat Simple_repeat 3 26 0 306 287 189 14 chr2 3427260 3427403 -247260451 - MIR SINE MIR 0 262 95 774 244 114 36 chr2 3428805 3429112 -247258742 + MLT1D LTR MaLR 47 377 -128 192 195 0 24 chr2 3430018 3430059 -247257795 + MIR SINE MIR 33 72 -136 189 107 0 0 chr2 3430566 3430594 -247257260 + (TC)n Simple_repeat Simple_repeat 2 29 0 319 355 112 0 chr2 3432078 3432247 -247255607 - MIR SINE MIR -19 243 56 364 252 37 0 chr2 3432385 3432492 -247255362 + LTR33 LTR ERVL 101 211 -310 2188 92 3 0 chr2 3433744 3434038 -247253816 - AluSx SINE Alu -17 295 1 324 358 0 15 chr2 3435459 3435593 -247252261 - MER94 DNA DNA -2 132 1 222 343 59 20 chr2 3435875 3435977 -247251877 + L2 LINE L2 2948 3053 -219 227 375 36 27 chr2 3437769 3437881 -247249973 - L2 LINE L2 -18 3254 3142 360 0 0 0 chr2 3438083 3438123 -247249731 + (CA)n Simple_repeat Simple_repeat 1 40 0 234 0 0 0 chr2 3438122 3438148 -247249706 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 220 356 134 18 chr2 3438526 3439079 -247248775 + L2 LINE L2 2325 2941 -373 187 185 160 76 chr2 3439247 3439366 -247248488 + L2 LINE L2 3137 3265 -7 250 226 11 113 chr2 3439723 3439909 -247247945 + GA-rich Low_complexity Low_complexity 5 171 0 224 255 246 0 chr2 3441314 3441433 -247246421 - MIR SINE MIR -65 143 41 21 0 0 0 chr2 3441708 3441729 -247246125 + AT_rich Low_complexity Low_complexity 1 21 0 240 297 63 51 chr2 3442702 3442877 -247244977 - MIR SINE MIR -6 256 80 237 394 32 7 chr2 3443289 3443444 -247244410 - L2 LINE L2 -599 2715 2557 350 289 0 0 chr2 3443457 3443540 -247244314 + L2 LINE L2 3189 3271 -1 206 223 0 109 chr2 3443992 3444185 -247243669 + C-rich Low_complexity Low_complexity 5 176 0 218 230 0 102 chr2 3444387 3444583 -247243271 + C-rich Low_complexity Low_complexity 2 177 0 252 208 18 83 chr2 3444666 3444834 -247243020 + C-rich Low_complexity Low_complexity 2 158 0 741 230 73 0 chr2 3444968 3445133 -247242721 - MER5B DNA MER1_type -1 177 1 1611 235 40 6 chr2 3447003 3447356 -247240498 - MLT1A1 LTR MaLR 0 365 1 738 323 126 41 chr2 3447489 3448468 -247239386 + L2 LINE L2 206 1267 -2047 236 298 50 16 chr2 3448471 3448592 -247239262 + L2 LINE L2 1581 1705 -1609 625 197 16 0 chr2 3448739 3448866 -247238988 + L1MC2 LINE L1 6215 6343 -1 571 269 84 52 chr2 3449880 3450361 -247237493 - MLT1H1 LTR MaLR 0 555 62 1046 132 44 11 chr2 3450624 3450938 -247236916 + THE1C LTR MaLR 1 375 0 10524 126 17 14 chr2 3450938 3452513 -247235341 + THE1C-int LTR MaLR 1 1580 0 1065 127 78 11 chr2 3452513 3452817 -247235037 + THE1C LTR MaLR 1 375 0 242 292 67 0 chr2 3452863 3452952 -247234902 - LTR16A LTR ERVL -260 190 96 276 330 19 0 chr2 3453331 3453437 -247234417 - HERV16 LTR ERVL -3575 1421 1314 212 209 0 0 chr2 3454441 3454484 -247233370 - L3 LINE CR1 -124 1453 1411 318 301 66 22 chr2 3454582 3454765 -247233089 - LTR16A LTR ERVL -93 357 167 359 200 42 11 chr2 3454820 3454915 -247232939 + L1MD3 LINE L1 7898 7995 0 236 310 159 7 chr2 3455600 3455745 -247232109 + MIR SINE MIR 14 180 -82 1711 193 171 8 chr2 3456027 3456395 -247231459 + MSTA LTR MaLR 1 428 0 467 297 31 0 chr2 3458039 3458167 -247229687 + MIR3 SINE MIR 72 203 -5 943 233 43 4 chr2 3458461 3458693 -247229161 - MLT1E LTR MaLR -9 584 344 413 295 63 16 chr2 3458780 3458970 -247228884 - MLT1E LTR MaLR -394 199 1 320 300 131 31 chr2 3459051 3459471 -247228383 - L2 LINE L2 -365 2949 2488 188 228 88 35 chr2 3459858 3459915 -247227939 + L2 LINE L2 3206 3265 -7 1272 270 91 0 chr2 3462651 3462969 -247224885 + MER7A DNA MER2_type 1 345 -1 332 303 0 64 chr2 3466939 3467179 -247220675 + C-rich Low_complexity Low_complexity 1 224 0 307 77 19 0 chr2 3468779 3468831 -247219023 - AluSx SINE Alu 0 301 249 1181 135 65 0 chr2 3468831 3469016 -247218838 - AluSx SINE Alu -115 197 1 349 307 50 14 chr2 3469521 3469661 -247218193 + MIR SINE MIR 5 149 -113 2080 259 39 74 chr2 3470617 3471027 -247216827 + MER21B LTR ERV1 1 373 -490 2354 111 39 28 chr2 3471027 3471387 -247216467 - THE1B LTR MaLR 0 364 1 2080 259 39 74 chr2 3471387 3471742 -247216112 + MER21B LTR ERV1 373 739 -124 315 271 243 11 chr2 3472868 3473045 -247214809 - MIR SINE MIR 0 262 45 250 352 19 0 chr2 3475489 3475594 -247212260 + MIR SINE MIR 31 137 -71 2200 151 8 30 chr2 3476332 3476704 -247211150 - THE1B LTR MaLR 0 364 1 302 353 131 20 chr2 3476762 3477359 -247210495 + L2 LINE L2 2047 2709 -605 2297 220 59 108 chr2 3477563 3477648 -247210206 + L1MC4 LINE L1 6460 6548 -1447 2166 91 10 3 chr2 3477648 3477946 -247209908 + AluSq SINE Alu 1 300 -13 2297 220 59 108 chr2 3477946 3479167 -247208687 + L1MC4 LINE L1 6548 7757 -238 210 267 0 0 chr2 3481307 3481352 -247206502 + (TATG)n Simple_repeat Simple_repeat 1 45 0 640 308 125 70 chr2 3482372 3482440 -247205414 + L1MEc LINE L1 1353 1416 -4971 2382 59 3 7 chr2 3482440 3482744 -247205110 + AluY SINE Alu 1 303 -8 640 308 125 70 chr2 3482744 3483105 -247204749 + L1MEc LINE L1 1416 1756 -4631 2122 200 42 9 chr2 3483105 3483535 -247204319 + LTR56 LTR ERV1 1 444 -1 640 308 125 70 chr2 3483535 3484172 -247203682 + L1MEc LINE L1 1756 2479 -3908 367 313 101 54 chr2 3484360 3484638 -247203216 + L1MEc LINE L1 2666 2956 -3259 36 53 0 0 chr2 3484883 3484940 -247202914 + AT_rich Low_complexity Low_complexity 1 57 0 466 295 122 73 chr2 3484942 3485352 -247202502 + L1MEc LINE L1 2990 3419 -2796 255 280 40 0 chr2 3485352 3485427 -247202427 + Tigger6 DNA MER2_type 1 78 -1519 232 286 71 0 chr2 3486843 3486955 -247200899 + MLT1L LTR MaLR 163 282 -333 254 242 0 77 chr2 3487118 3487209 -247200645 - L1MC4 LINE L1 -1341 6701 6618 1106 128 6 17 chr2 3487232 3487412 -247200442 + AluSg/x SINE Alu 135 312 0 318 269 21 21 chr2 3487625 3487718 -247200136 - L1MC4 LINE L1 -2643 5399 5307 2224 86 0 10 chr2 3487725 3488027 -247199827 - AluY SINE Alu -12 299 1 42 65 0 0 chr2 3488210 3488287 -247199567 + AT_rich Low_complexity Low_complexity 1 77 0 185 164 0 36 chr2 3489110 3489165 -247198689 + (TTA)n Simple_repeat Simple_repeat 2 54 0 208 264 83 0 chr2 3489822 3489894 -247197960 + MIR SINE MIR 127 204 -58 2086 141 141 5 chr2 3489979 3490355 -247197499 - MSTA LTR MaLR 0 428 2 1381 272 87 90 chr2 3490409 3492091 -247195763 - HAL1 LINE L1 0 2507 830 309 169 0 0 chr2 3492102 3492161 -247195693 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 1966 184 46 90 chr2 3492161 3492661 -247195193 + MLT2B1 LTR ERVL 2 479 -41 218 202 40 40 chr2 3492661 3492758 -247195096 + (TA)n Simple_repeat Simple_repeat 2 101 -24 1231 168 26 17 chr2 3492758 3492990 -247194864 - MER46A DNA MER2_type 0 236 3 218 202 40 40 chr2 3492990 3493016 -247194838 + (TA)n Simple_repeat Simple_repeat 100 125 0 1391 59 0 0 chr2 3493069 3493239 -247194615 + LTR9 LTR ERV1 3 172 -440 395 229 4 88 chr2 3493241 3493454 -247194400 + L1MC4 LINE L1 6538 6646 -1139 393 269 0 23 chr2 3493440 3493572 -247194282 + L1MC4 LINE L1 6571 6646 -1139 * 359 281 0 44 chr2 3493527 3493641 -247194213 - L1MC4 LINE L1 -1323 6719 6611 * 374 271 21 10 chr2 3493595 3493691 -247194163 + L1MC4 LINE L1 6613 6709 -1333 358 259 8 76 chr2 3493625 3493756 -247194098 - L1MC4 LINE L1 -1333 6709 6588 * 342 273 0 30 chr2 3493737 3493836 -247194018 - L1MC4 LINE L1 -1333 6709 6614 * 217 214 0 0 chr2 3493852 3493928 -247193926 + (TG)n Simple_repeat Simple_repeat 1 76 0 258 61 0 0 chr2 3493938 3493971 -247193883 + MLT2C1 LTR ERVL 360 392 -5 224 167 21 0 chr2 3493980 3494028 -247193826 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 3544 151 28 12 chr2 3494149 3494751 -247193103 - LTR9 LTR ERV1 0 612 1 239 273 79 43 chr2 3495174 3495313 -247192541 - HAL1 LINE L1 -2363 144 1 1955 128 0 23 chr2 3495688 3495994 -247191860 - AluSx SINE Alu -13 299 1 249 294 98 21 chr2 3496990 3497133 -247190721 - MER103 DNA DNA -2 164 11 207 333 23 0 chr2 3497362 3497449 -247190405 + CT-rich Low_complexity Low_complexity 2 90 0 2011 123 13 13 chr2 3497600 3497910 -247189944 + L1PA13 LINE L1 5546 5855 -308 1261 229 14 8 chr2 3497898 3498269 -247189585 + L1MB7 LINE L1 2824 3196 -2950 * 5122 133 3 1 chr2 3498268 3499673 -247188181 + L1PA12 LINE L1 4577 5984 -184 2063 170 25 0 chr2 3499673 3500037 -247187817 - L1M4 LINE L1 -483 5701 5329 1366 73 28 0 chr2 3500043 3500221 -247187633 + L1PA12 LINE L1 5985 6167 -1 352 176 46 183 chr2 3500222 3500287 -247187567 + L1MB7 LINE L1 4303 4337 -1809 2675 92 20 52 chr2 3500287 3500731 -247187123 - L1PB1 LINE L1 -3 6148 5719 352 176 46 183 chr2 3500731 3500818 -247187036 + L1MB7 LINE L1 4337 4434 -1712 3786 197 33 19 chr2 3500842 3501855 -247185999 + L1MB7 LINE L1 5102 6126 -58 1136 231 45 6 chr2 3501869 3502181 -247185673 - L1MA9 LINE L1 -38 6274 5951 2652 179 5 0 chr2 3502189 3502635 -247185219 - L1PA16 LINE L1 -4 6162 5715 1597 77 9 18 chr2 3502735 3502957 -247184897 - L1P LINE L1 -5926 220 1 * 4933 215 66 25 chr2 3502956 3504713 -247183141 - L1MDa LINE L1 -4536 2004 21 452 298 116 30 chr2 3504739 3504937 -247182917 - MIR SINE MIR -43 219 5 201 344 73 21 chr2 3504934 3505030 -247182824 + L2 LINE L2 3207 3307 -6 * 1869 142 14 3 chr2 3505321 3505616 -247182238 + AluSx SINE Alu 1 298 -14 654 250 95 20 chr2 3505769 3505969 -247181885 + MIR SINE MIR 9 223 -39 3231 38 0 0 chr2 3505970 3506564 -247181290 - L1P2 LINE L1 -570 5584 4991 381 57 19 0 chr2 3506564 3506609 -247181245 + L1PA6 LINE L1 6096 6149 -5 2444 187 17 15 chr2 3507199 3507660 -247180194 - MLT1C LTR MaLR 0 467 6 1964 121 10 3 chr2 3512140 3512429 -247175425 + AluSq SINE Alu 2 292 -21 1014 153 178 4 chr2 3512442 3512597 -247175257 + L1MC2 LINE L1 6057 6184 -160 180 0 0 0 chr2 3512597 3512617 -247175237 + (TG)n Simple_repeat Simple_repeat 1 20 0 1014 153 178 4 chr2 3512617 3512697 -247175157 + L1MC2 LINE L1 6184 6333 -11 575 205 45 39 chr2 3513067 3513223 -247174631 - MLT1D LTR MaLR -335 170 14 303 333 88 13 chr2 3513483 3513642 -247174212 + MIR SINE MIR 92 262 0 619 294 58 20 chr2 3513786 3514078 -247173776 - L1MC4a LINE L1 -201 7607 7305 384 22 0 0 chr2 3516025 3516070 -247171784 + (TG)n Simple_repeat Simple_repeat 2 46 0 * 441 0 0 0 chr2 3516069 3516118 -247171736 + (TA)n Simple_repeat Simple_repeat 1 49 0 233 326 52 22 chr2 3516451 3516586 -247171268 - LTR16A1 LTR ERVL 0 457 319 234 0 0 0 chr2 3517038 3517064 -247170790 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 4915 42 2 0 chr2 3517792 3518370 -247169484 + L1PA5 LINE L1 5576 6154 0 2021 117 0 0 chr2 3519866 3520172 -247167682 + AluSx SINE Alu 1 306 0 287 287 116 31 chr2 3520208 3520337 -247167517 + MIR SINE MIR 1 140 -122 219 363 66 0 chr2 3520827 3520918 -247166936 - MIR SINE MIR -115 147 51 273 286 55 11 chr2 3523635 3523726 -247164128 + L2 LINE L2 3162 3256 -16 1515 265 94 21 chr2 3526992 3527509 -247160345 - MER82 DNA MER2_type 0 653 99 1491 232 78 5 chr2 3527509 3527854 -247160000 + MLT2D LTR ERVL 1 378 -36 342 0 0 0 chr2 3527854 3527892 -247159962 + (CA)n Simple_repeat Simple_repeat 2 39 0 1491 232 78 5 chr2 3527892 3527930 -247159924 + MLT2D LTR ERVL 378 412 -2 437 162 0 27 chr2 3527930 3528004 -247159850 - MER82 DNA MER2_type -552 101 30 189 169 102 34 chr2 3530881 3530940 -247156914 + MIR SINE MIR 91 153 -55 344 301 18 26 chr2 3531269 3531382 -247156472 + MIR SINE MIR 21 132 -76 503 227 120 7 chr2 3531507 3531657 -247156197 + MER58B DNA MER1_type 172 338 -3 215 233 0 14 chr2 3533306 3533379 -247154475 + GA-rich Low_complexity Low_complexity 1 72 0 680 179 6 28 chr2 3533397 3533576 -247154278 + GA-rich Low_complexity Low_complexity 1 175 0 332 295 93 27 chr2 3533894 3534077 -247153777 - MLT1J1 LTR MaLR -16 430 236 373 358 18 0 chr2 3534110 3534275 -247153579 - MLT1J2 LTR MaLR -279 171 4 2573 103 22 8 chr2 3534326 3534684 -247153170 + THE1B LTR MaLR 1 363 -1 13040 119 18 6 chr2 3535035 3537083 -247150771 - Tigger1 DNA MER2_type 0 2418 346 194 291 0 0 chr2 3537743 3537798 -247150056 - L2 LINE L2 -575 2739 2685 335 228 79 59 chr2 3539726 3539827 -247148027 - L1ME4a LINE L1 -12 6109 6007 347 350 55 14 chr2 3540431 3540648 -247147206 - MIR SINE MIR -15 247 22 280 229 16 0 chr2 3541715 3541776 -247146078 + L2 LINE L2 2998 3059 -213 188 323 0 0 chr2 3541944 3542006 -247145848 + L2 LINE L2 3187 3248 -24 233 353 8 8 chr2 3542021 3542140 -247145714 + MLT1E LTR MaLR 44 162 -431 244 233 41 0 chr2 3542174 3542247 -247145607 + MLT1E LTR MaLR 431 506 -87 215 324 65 88 chr2 3542463 3542633 -247145221 + MIR SINE MIR 1 166 -96 271 298 67 0 chr2 3542639 3542743 -247145111 - L2 LINE L2 -8 3264 3154 3592 14 0 10 chr2 3544224 3544668 -247143186 - L1PA2 LINE L1 0 6155 5747 4075 8 0 0 chr2 3544668 3545144 -247142710 + L1PA2 LINE L1 5279 5754 -401 248 318 131 0 chr2 3545707 3545814 -247142040 + MIR SINE MIR 33 153 -55 268 271 10 165 chr2 3546217 3546612 -247141242 - L2 LINE L2 -80 3233 2900 204 329 0 14 chr2 3546601 3546674 -247141180 + L2 LINE L2 3242 3313 0 * 2615 62 0 0 chr2 3546677 3546985 -247140869 - AluY SINE Alu -3 308 1 309 269 168 30 chr2 3547040 3547207 -247140647 - L2 LINE L2 -493 2821 2632 264 156 0 0 chr2 3547319 3547364 -247140490 + L1PA16 LINE L1 6121 6165 -1 5686 250 58 45 chr2 3547660 3548135 -247139719 + L1MB1 LINE L1 1182 1649 -4755 19332 45 0 1 chr2 3548135 3551286 -247136568 - L1PA5 LINE L1 -4 6150 3001 5686 250 58 45 chr2 3551286 3551427 -247136427 + L1MB1 LINE L1 1649 1787 -4617 180 0 0 0 chr2 3551427 3551447 -247136407 + (CA)n Simple_repeat Simple_repeat 1 20 0 5686 250 58 45 chr2 3551447 3553424 -247134430 + L1MB1 LINE L1 1787 3736 -2668 664 122 0 0 chr2 3553424 3553514 -247134340 + AluJ/FLAM SINE Alu 13 102 -210 676 200 0 16 chr2 3553521 3553646 -247134208 + FRAM SINE Alu 53 175 -1 5686 250 58 45 chr2 3553646 3556149 -247131705 + L1MB1 LINE L1 3741 6402 -2 3671 201 57 103 chr2 3556172 3556951 -247130903 - MLT1B-int LTR MaLR -125 1246 551 2722 123 0 5 chr2 3556951 3557359 -247130495 - L1PA13 LINE L1 0 6163 5758 3671 201 57 103 chr2 3557359 3557886 -247129968 - MLT1B-int LTR MaLR -820 551 1 1596 188 48 10 chr2 3557886 3558258 -247129596 - MLT1B LTR MaLR 0 467 1 509 239 5 0 chr2 3558272 3558495 -247129359 + (TG)n Simple_repeat Simple_repeat 1 224 0 190 366 46 7 chr2 3558522 3558675 -247129179 - L2 LINE L2 -1364 1950 1792 252 243 14 0 chr2 3559307 3559381 -247128473 + HAL1 LINE L1 2322 2396 -111 208 254 42 14 chr2 3560810 3560881 -247126973 + L3 LINE CR1 1349 1421 -156 214 356 57 26 chr2 3561295 3561489 -247126365 + L3 LINE CR1 1244 1443 -134 311 282 36 45 chr2 3561941 3562051 -247125803 + MIR SINE MIR 38 146 -62 425 315 56 28 chr2 3562620 3562798 -247125056 - MIR SINE MIR -6 256 74 780 271 199 14 chr2 3562906 3563323 -247124531 + MLT1D LTR MaLR 2 495 -10 295 302 232 23 chr2 3563383 3563853 -247124001 + L2 LINE L2 2172 2739 -575 743 203 96 12 chr2 3564209 3564517 -247123337 + MSTD LTR MaLR 6 395 -1 294 293 95 26 chr2 3564520 3564636 -247123218 + L2 LINE L2 3188 3311 -2 337 356 10 0 chr2 3564663 3564767 -247123087 - MIR SINE MIR -99 163 59 701 329 109 22 chr2 3565443 3565939 -247121915 - MLT1G LTR MaLR 0 590 52 1905 181 35 46 chr2 3566001 3566432 -247121422 - MSTC LTR MaLR 0 428 3 1320 198 32 0 chr2 3566458 3566741 -247121113 - MLT1B LTR MaLR -19 371 80 210 184 20 0 chr2 3570126 3570175 -247117679 + (CA)n Simple_repeat Simple_repeat 1 50 0 294 95 0 0 chr2 3572283 3572325 -247115529 + (GA)n Simple_repeat Simple_repeat 1 42 0 429 54 0 0 chr2 3572609 3572665 -247115189 + (TGGA)n Simple_repeat Simple_repeat 2 57 0 266 316 0 0 chr2 3572921 3573000 -247114854 + (CA)n Simple_repeat Simple_repeat 2 80 0 630 215 47 29 chr2 3574866 3575038 -247112816 + MLT1A1 LTR MaLR 1 175 -190 2225 207 38 47 chr2 3575070 3575646 -247112208 + MLT1A1-int LTR MaLR 142 712 -1023 407 206 19 77 chr2 3575845 3576000 -247111854 + MLT1A1-int LTR MaLR 973 1118 -617 * 1169 212 141 96 chr2 3575993 3576441 -247111413 + MLT1A1-int LTR MaLR 1268 1735 0 787 231 5 39 chr2 3576441 3576644 -247111210 + MLT1A1 LTR MaLR 1 196 -169 930 221 20 0 chr2 3576662 3576861 -247110993 + MLT1A1 LTR MaLR 161 363 -2 1856 118 82 25 chr2 3578140 3578495 -247109359 - THE1C LTR MaLR 0 375 1 420 72 40 59 chr2 3580895 3581047 -247106807 + (CA)n Simple_repeat Simple_repeat 2 150 0 201 184 48 39 chr2 3581050 3581153 -247106701 + (CACAC)n Simple_repeat Simple_repeat 4 107 0 268 103 52 31 chr2 3581156 3581253 -247106601 + (CA)n Simple_repeat Simple_repeat 1 99 0 207 213 0 21 chr2 3581463 3581510 -247106344 + CT-rich Low_complexity Low_complexity 1 46 0 412 198 16 59 chr2 3581661 3581935 -247105919 + GA-rich Low_complexity Low_complexity 1 262 0 200 237 68 0 chr2 3582259 3582318 -247105536 + CT-rich Low_complexity Low_complexity 4 66 0 192 354 21 10 chr2 3584195 3584291 -247103563 + L2 LINE L2 2666 2762 -552 835 249 40 57 chr2 3584540 3584894 -247102960 + MLT1B LTR MaLR 18 365 -25 577 205 22 6 chr2 3585166 3585697 -247102157 + (CA)n Simple_repeat Simple_repeat 1 539 0 254 159 0 79 chr2 3585697 3585760 -247102094 - MER4-int LTR ERV1 -5432 1166 1109 387 227 13 7 chr2 3585770 3585920 -247101934 + (CA)n Simple_repeat Simple_repeat 2 152 0 368 322 11 11 chr2 3585934 3586111 -247101743 + (CA)n Simple_repeat Simple_repeat 1 177 0 359 226 19 7 chr2 3586125 3586280 -247101574 + (CA)n Simple_repeat Simple_repeat 1 157 0 295 195 183 0 chr2 3588045 3588127 -247099727 + MIR SINE MIR 61 157 -105 188 233 67 50 chr2 3588080 3588140 -247099714 - L2 LINE L2 -1887 1427 1367 * 521 359 35 37 chr2 3588343 3588805 -247099049 + L2 LINE L2 2156 2616 -698 22 0 0 0 chr2 3588966 3588988 -247098866 + AT_rich Low_complexity Low_complexity 1 22 0 531 0 0 0 chr2 3589496 3589555 -247098299 + (TA)n Simple_repeat Simple_repeat 2 60 0 275 88 35 53 chr2 3589555 3589612 -247098242 + LTR33A LTR ERVL 450 505 -18 23 0 0 0 chr2 3590230 3590253 -247097601 + AT_rich Low_complexity Low_complexity 1 23 0 435 335 11 47 chr2 3590892 3591083 -247096771 + L1ME4a LINE L1 5731 5914 -207 260 300 47 0 chr2 3591093 3591243 -247096611 + L1ME4a LINE L1 5956 6112 -9 621 294 45 81 chr2 3591601 3592022 -247095832 + L2 LINE L2 2127 2532 -782 183 333 0 0 chr2 3592123 3592177 -247095677 - MIR SINE MIR -128 134 81 275 303 11 22 chr2 3593457 3593635 -247094219 + (TGAG)n Simple_repeat Simple_repeat 4 179 0 418 223 54 18 chr2 3596423 3596535 -247091319 - MIR3 SINE MIR 0 208 93 425 286 104 16 chr2 3596705 3596897 -247090957 - MIR SINE MIR -48 214 6 3686 122 23 28 chr2 3597085 3597685 -247090169 + MER4A LTR ERV1 1 597 -3 229 179 45 143 chr2 3598866 3598978 -247088876 - MLT1L LTR MaLR -220 395 295 550 238 41 8 chr2 3601218 3601340 -247086514 - MIR SINE MIR -70 192 67 340 262 0 36 chr2 3601417 3601501 -247086353 - MIR SINE MIR -29 233 153 1039 256 94 20 chr2 3601574 3601996 -247085858 + L1ME1 LINE L1 5717 6334 0 294 375 26 7 chr2 3602941 3603093 -247084761 - MIR SINE MIR -50 212 58 198 247 129 54 chr2 3603105 3603198 -247084656 - MIR SINE MIR -3 259 160 245 216 114 34 chr2 3603338 3603426 -247084428 + MLT1I LTR MaLR 114 208 -201 277 279 0 0 chr2 3604233 3604294 -247083560 + L2 LINE L2 3208 3268 -4 270 260 115 29 chr2 3605138 3605242 -247082612 + MLT1J2 LTR MaLR 291 403 -47 550 253 217 9 chr2 3605273 3605695 -247082159 + L2 LINE L2 2701 3217 -96 555 173 0 0 chr2 3605704 3605872 -247081982 + (TG)n Simple_repeat Simple_repeat 2 169 0 420 266 0 0 chr2 3605872 3605966 -247081888 + L2 LINE L2 3218 3311 -2 288 137 0 0 chr2 3606746 3606797 -247081057 + (T)n Simple_repeat Simple_repeat 1 51 0 260 239 28 0 chr2 3608147 3608218 -247079636 - L1MA6 LINE L1 -167 6133 6061 2731 186 227 70 chr2 3610638 3611518 -247076336 - LTR28 LTR ERV1 -2 1018 1 208 261 92 0 chr2 3612041 3612106 -247075748 - L2 LINE L2 -10 3303 3233 271 152 0 0 chr2 3614280 3614326 -247073528 + U6 snRNA snRNA 62 107 0 2171 123 3 0 chr2 3614507 3614800 -247073054 - AluSp SINE Alu -19 294 1 322 273 61 61 chr2 3615101 3615427 -247072427 - L1M4 LINE L1 -595 5583 5258 649 364 68 23 chr2 3615449 3616009 -247071845 - L1M4 LINE L1 -922 5224 4640 1691 182 17 14 chr2 3616010 3616307 -247071547 - AluJo SINE Alu -14 298 1 1091 151 47 0 chr2 3616320 3616532 -247071322 - L1M2 LINE L1 -647 5644 5423 805 211 0 0 chr2 3616527 3616693 -247071161 + L1M2 LINE L1 5628 5793 -507 * 437 187 0 37 chr2 3616693 3616880 -247070974 + (TA)n Simple_repeat Simple_repeat 1 180 0 196 194 0 28 chr2 3616891 3616963 -247070891 + (TA)n Simple_repeat Simple_repeat 1 70 0 303 129 57 71 chr2 3616964 3617034 -247070820 + L1MCa LINE L1 2000 2068 -4358 408 160 7 35 chr2 3617034 3617178 -247070676 + (TA)n Simple_repeat Simple_repeat 1 140 0 268 313 73 20 chr2 3617182 3617428 -247070426 + L1MC3 LINE L1 5750 6008 -1777 * 2229 128 39 25 chr2 3617214 3617645 -247070209 + L1MA8 LINE L1 5782 6218 -73 458 286 86 37 chr2 3617656 3617901 -247069953 - L1M4 LINE L1 -1503 4643 4387 1664 194 18 3 chr2 3617960 3618267 -247069587 + AluSx SINE Alu 1 311 0 571 314 62 47 chr2 3618278 3618419 -247069435 + MIR SINE MIR 1 149 -113 1826 189 36 3 chr2 3618419 3618752 -247069102 - MER7A DNA MER2_type -1 345 4 571 314 62 47 chr2 3618752 3618868 -247068986 + MIR SINE MIR 149 262 0 1774 236 17 48 chr2 3619533 3620015 -247067839 - MLT1C LTR MaLR 0 467 1 381 366 31 11 chr2 3620228 3620419 -247067435 - MIR SINE MIR -21 241 47 395 303 32 50 chr2 3623098 3623319 -247064535 - L2 LINE L2 -15 3298 3082 403 326 114 15 chr2 3623483 3623817 -247064037 - L2 LINE L2 -559 2755 2389 2595 163 19 26 chr2 3624086 3624440 -247063414 - MSTB LTR MaLR 0 426 74 2402 98 0 0 chr2 3624440 3624745 -247063109 - AluSg SINE Alu -5 305 1 2595 163 19 26 chr2 3624745 3624819 -247063035 - MSTB LTR MaLR -352 74 1 261 348 62 53 chr2 3625029 3625589 -247062265 + L2 LINE L2 2517 3082 -190 789 222 11 6 chr2 3626503 3626683 -247061171 - MLT1A1 LTR MaLR 0 365 185 1976 81 16 0 chr2 3626743 3626991 -247060863 + AluSp SINE Alu 44 295 -18 323 189 0 113 chr2 3627030 3627052 -247060802 - MLT1A1 LTR MaLR -334 94 71 2163 119 10 3 chr2 3627052 3627354 -247060500 - AluSg SINE Alu -6 304 1 323 189 0 113 chr2 3627354 3627437 -247060417 - MLT1A1 LTR MaLR -357 71 1 1437 278 123 24 chr2 3627626 3628339 -247059515 - L1MC4 LINE L1 -87 7955 7172 322 309 55 68 chr2 3628414 3628576 -247059278 - MIR SINE MIR -12 250 90 2325 171 15 22 chr2 3628576 3629033 -247058821 - MSTB2 LTR MaLR -3 454 1 322 309 55 68 chr2 3629033 3629090 -247058764 - MIR SINE MIR -172 90 34 32 0 0 0 chr2 3629667 3629699 -247058155 + AT_rich Low_complexity Low_complexity 1 32 0 2256 120 10 0 chr2 3630063 3630362 -247057492 + AluSx SINE Alu 1 302 -10 186 222 0 0 chr2 3631162 3631216 -247056638 + A-rich Low_complexity Low_complexity 1 54 0 1104 227 97 61 chr2 3631245 3631690 -247056164 + MER101 LTR ERV1 5 465 -9 378 299 28 57 chr2 3632204 3632402 -247055452 + L1MC4a LINE L1 5574 5590 -531 3948 171 25 14 chr2 3632402 3633116 -247054738 + MER72 LTR ERV1 1 722 0 378 299 28 57 chr2 3633116 3633269 -247054585 + L1MC4a LINE L1 5590 5746 -375 258 323 91 0 chr2 3633613 3633712 -247054142 - MIR SINE MIR -63 145 38 318 261 72 36 chr2 3635595 3635706 -247052148 + L2 LINE L2 3125 3239 -33 220 245 19 0 chr2 3635984 3636037 -247051817 + L2 LINE L2 3258 3311 -2 247 264 17 142 chr2 3636071 3636212 -247051642 + MIR SINE MIR 32 153 -66 321 265 15 0 chr2 3636296 3636364 -247051490 - L2 LINE L2 0 3313 3245 581 321 125 27 chr2 3636606 3636974 -247050880 - L2 LINE L2 -18 3254 2851 254 295 114 30 chr2 3638027 3638182 -247049672 + MIR SINE MIR 39 212 -50 2203 81 13 3 chr2 3638182 3638492 -247049362 + AluSq SINE Alu 1 313 0 254 295 114 30 chr2 3638492 3638533 -247049321 + MIR SINE MIR 212 248 -14 397 186 0 72 chr2 3639152 3639345 -247048509 + C-rich Low_complexity Low_complexity 2 180 0 467 272 35 0 chr2 3639362 3639535 -247048319 + C-rich Low_complexity Low_complexity 2 180 0 365 314 0 0 chr2 3639548 3639723 -247048131 + (CACCC)n Simple_repeat Simple_repeat 4 178 0 199 292 42 31 chr2 3640316 3640412 -247047442 - MIR3 SINE MIR -25 183 87 2033 113 0 0 chr2 3641152 3641434 -247046420 + AluSx SINE Alu 3 284 -28 770 240 134 55 chr2 3643145 3643511 -247044343 - MSTD LTR MaLR -1 395 1 306 304 21 29 chr2 3643544 3643696 -247044158 - MIR SINE MIR -67 141 3 2009 89 0 4 chr2 3643992 3644263 -247043591 + AluSc SINE Alu 25 294 -15 535 105 26 0 chr2 3645083 3645201 -247042653 + AluSg/x SINE Alu 201 320 0 27 29 0 0 chr2 3645874 3645908 -247041946 + AT_rich Low_complexity Low_complexity 1 34 0 315 285 36 67 chr2 3647251 3647416 -247040438 - L2 LINE L2 -1 3312 3153 352 339 23 8 chr2 3647519 3647649 -247040205 + L2 LINE L2 3137 3268 -4 4464 187 55 23 chr2 3647653 3648626 -247039228 - L1MA9 LINE L1 -38 6274 5270 2084 217 70 2 chr2 3648625 3649123 -247038731 + L1MA9 LINE L1 4728 5259 -887 * 2005 144 0 3 chr2 3649544 3649849 -247038005 - AluJb SINE Alu -6 306 3 181 371 86 19 chr2 3651208 3651464 -247036390 - L2 LINE L2 -457 2857 2585 474 224 63 29 chr2 3652721 3652895 -247034959 - MER104 DNA MER2_type 0 180 1 198 366 24 0 chr2 3653195 3653277 -247034577 + L2 LINE L2 3184 3267 -5 371 263 108 61 chr2 3654009 3654287 -247033567 + L1MC5 LINE L1 7626 7916 -45 2394 72 0 0 chr2 3654852 3655159 -247032695 + AluY SINE Alu 1 307 -4 325 265 8 98 chr2 3655175 3655307 -247032547 + L1ME4a LINE L1 5580 5699 -422 298 308 42 49 chr2 3655344 3655521 -247032333 + L1ME4a LINE L1 5784 5960 -161 2046 128 0 3 chr2 3655521 3655818 -247032036 + AluSg SINE Alu 3 298 -12 298 308 42 49 chr2 3655818 3655903 -247031951 + L1ME4a LINE L1 5960 6044 -77 4633 208 49 36 chr2 3655903 3657601 -247030253 - L1MC2 LINE L1 -8 6754 5038 1680 174 0 10 chr2 3657601 3657894 -247029960 + AluJo SINE Alu 10 299 -13 4633 208 49 36 chr2 3657894 3658046 -247029808 - L1MC2 LINE L1 -1724 5038 4890 4879 229 70 87 chr2 3658059 3658122 -247029732 - L1MC2 LINE L1 -2113 4451 4388 2061 164 44 29 chr2 3658122 3658506 -247029348 + MLT1B LTR MaLR 1 390 0 4879 229 70 87 chr2 3658506 3659154 -247028700 - L1MC2 LINE L1 -2176 4388 3731 216 0 0 0 chr2 3659154 3659178 -247028676 + (TC)n Simple_repeat Simple_repeat 2 25 0 4879 229 70 87 chr2 3659178 3659283 -247028571 - L1MC2 LINE L1 -2833 3731 3626 716 284 0 0 chr2 3659283 3659452 -247028402 + MER6B DNA MER2_type 2 170 -40 4879 229 70 87 chr2 3659452 3661156 -247026698 - L1MC2 LINE L1 -2938 3626 1787 2886 194 29 23 chr2 3661159 3661310 -247026544 - L1MC2 LINE L1 -4852 1193 1044 2597 115 3 13 chr2 3661310 3661685 -247026169 + THE1C LTR MaLR 1 371 -4 2886 194 29 23 chr2 3661685 3662555 -247025299 - L1MC2 LINE L1 -5001 1044 517 224 215 37 103 chr2 3663259 3663366 -247024488 - MIR SINE MIR -65 143 44 340 195 79 14 chr2 3663786 3663953 -247023901 - ORSL DNA AcHobo 0 275 67 297 274 0 0 chr2 3665130 3665225 -247022629 + (TG)n Simple_repeat Simple_repeat 2 96 0 26 30 0 0 chr2 3665471 3665504 -247022350 + AT_rich Low_complexity Low_complexity 1 33 0 231 114 0 0 chr2 3665591 3665626 -247022228 + (A)n Simple_repeat Simple_repeat 1 35 0 2090 143 55 62 chr2 3667207 3667640 -247020214 - Tigger2a DNA MER2_type -4 430 1 218 316 60 8 chr2 3667715 3667832 -247020022 - MIR3 SINE MIR -24 184 62 2066 132 0 0 chr2 3670084 3670373 -247017481 - AluSx SINE Alu -23 289 1 200 261 62 43 chr2 3671670 3671799 -247016055 - MIR SINE MIR -112 150 20 336 268 148 0 chr2 3672180 3672322 -247015532 + MER45C DNA AcHobo 1 163 -790 355 281 43 49 chr2 3672498 3672683 -247015171 + MER45C DNA AcHobo 461 644 -309 1306 234 38 0 chr2 3673032 3673348 -247014506 + MER45B DNA AcHobo 713 1040 0 965 266 126 42 chr2 3675215 3675669 -247012185 + HAL1 LINE L1 597 1088 -1419 2055 127 0 0 chr2 3675669 3675968 -247011886 + AluSx SINE Alu 1 299 -13 497 298 104 31 chr2 3675980 3676336 -247011518 + L1MCc LINE L1 24 405 -6018 1706 263 127 43 chr2 3676490 3677189 -247010665 + L1MCc LINE L1 807 1446 -5495 1626 174 17 3 chr2 3677189 3677477 -247010377 + AluJb SINE Alu 7 298 -14 1706 263 127 43 chr2 3677477 3678521 -247009333 + L1MCc LINE L1 1446 2720 -4221 266 71 0 24 chr2 3678521 3678563 -247009291 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1706 263 127 43 chr2 3678563 3678597 -247009257 + L1MCc LINE L1 2720 2750 -4191 486 221 25 16 chr2 3678622 3678744 -247009110 + L1ME3A LINE L1 196 318 -6245 332 291 114 48 chr2 3678761 3679115 -247008739 + MLT1J1 LTR MaLR 6 343 -103 491 155 78 6 chr2 3679724 3680053 -247007801 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 248 368 9 35 chr2 3680067 3680181 -247007673 + MIR SINE MIR 2 112 -150 209 255 10 112 chr2 3680527 3680625 -247007229 + L2 LINE L2 3223 3310 -3 201 332 189 37 chr2 3680657 3680874 -247006980 - L2 LINE L2 -2 3270 3021 278 273 91 82 chr2 3682751 3682971 -247004883 - MIR SINE MIR -6 256 35 218 336 92 8 chr2 3683631 3683750 -247004104 - L3 LINE CR1 -1022 555 427 26 0 0 0 chr2 3684004 3684030 -247003824 + AT_rich Low_complexity Low_complexity 1 26 0 396 59 0 0 chr2 3684689 3684740 -247003114 + (CA)n Simple_repeat Simple_repeat 2 52 0 282 123 0 0 chr2 3684854 3684911 -247002943 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 219 336 75 9 chr2 3684966 3685073 -247002781 - MIR SINE MIR -61 147 34 310 346 92 65 chr2 3685581 3686029 -247001825 + L1ME3A LINE L1 323 782 -5590 317 377 20 20 chr2 3686164 3686310 -247001544 + L1ME3A LINE L1 1196 1341 -5043 917 298 124 21 chr2 3686422 3686985 -247000869 - MLT1E1 LTR MaLR -29 625 5 1048 287 111 25 chr2 3686997 3688866 -246998988 + L1ME3A LINE L1 1575 3554 -2828 * 3791 179 33 33 chr2 3688858 3689565 -246998289 + L1MB7 LINE L1 5048 5756 -428 1771 151 141 26 chr2 3689565 3689949 -246997905 - MSTA LTR MaLR 0 428 1 3791 179 33 33 chr2 3689949 3690357 -246997497 + L1MB7 LINE L1 5756 6163 -21 2144 273 79 22 chr2 3690380 3691974 -246995880 + L1ME3A LINE L1 4727 6397 -9 1112 165 58 145 chr2 3692056 3692456 -246995398 - MLT1A1 LTR MaLR 0 365 1 236 356 34 62 chr2 3693955 3694101 -246993753 - L2 LINE L2 -5 3267 3126 21 0 0 0 chr2 3694584 3694605 -246993249 + AT_rich Low_complexity Low_complexity 1 21 0 2267 103 3 0 chr2 3694608 3694900 -246992954 + AluSq SINE Alu 1 293 -20 4946 121 56 39 chr2 3696046 3697687 -246990167 + L1PA16 LINE L1 4495 6166 0 354 277 46 8 chr2 3697742 3697872 -246989982 + MIR3 SINE MIR 74 208 0 40 37 0 0 chr2 3697877 3697931 -246989923 + AT_rich Low_complexity Low_complexity 1 54 0 598 287 59 1 chr2 3698208 3698397 -246989457 - MIR SINE MIR -50 212 15 302 372 78 35 chr2 3699754 3700125 -246987729 - L2 LINE L2 -603 2711 2325 1037 177 36 64 chr2 3700171 3700391 -246987463 + AluJo SINE Alu 68 281 -31 4052 145 21 39 chr2 3700395 3700522 -246987332 + L1MA7 LINE L1 5484 5612 -679 2130 122 0 44 chr2 3700522 3700841 -246987013 + AluSx SINE Alu 5 309 -3 4052 145 21 39 chr2 3700841 3701536 -246986318 + L1MA7 LINE L1 5612 6291 0 364 88 81 0 chr2 3701685 3701765 -246986089 - L1MB1 LINE L1 -1 6167 6098 5171 79 11 4 chr2 3701798 3702157 -246985697 - L1PB1 LINE L1 -2 6149 5794 414 0 0 0 chr2 3702157 3702203 -246985651 + (TG)n Simple_repeat Simple_repeat 2 47 0 5171 79 11 4 chr2 3702203 3702564 -246985290 - L1PB1 LINE L1 -357 5794 5424 368 323 40 7 chr2 3702703 3702916 -246984938 + MIR SINE MIR 5 222 -40 1026 220 112 67 chr2 3702917 3703372 -246984482 - MLT1H LTR MaLR -1 548 22 263 304 91 28 chr2 3704009 3704262 -246983592 + MLT1J LTR MaLR 236 504 -7 400 217 148 41 chr2 3704880 3705124 -246982730 + HAL1b LINE L1 726 995 -353 238 182 18 0 chr2 3705305 3705360 -246982494 - MLT2B1 LTR ERVL 0 520 465 183 80 0 0 chr2 3705364 3705389 -246982465 + (CATATA)n Simple_repeat Simple_repeat 2 26 0 768 215 133 7 chr2 3705446 3705803 -246982051 - MLT2B1 LTR ERVL -61 459 1 262 318 108 56 chr2 3706220 3706598 -246981256 + L2 LINE L2 2580 2977 -337 2316 99 0 3 chr2 3708841 3709135 -246978719 - AluSx SINE Alu -19 293 1 237 173 0 0 chr2 3709166 3709218 -246978636 - L1MB8 LINE L1 -14 6164 6113 * 5450 193 25 12 chr2 3709215 3710957 -246976897 + L1M2 LINE L1 4027 5787 -525 11533 179 49 23 chr2 3710960 3713434 -246974420 + L1P2 LINE L1 2253 4660 -1494 317 67 0 0 chr2 3713434 3713479 -246974375 + MADE1 DNA Mariner 1 45 -35 11533 179 49 23 chr2 3713479 3713754 -246974100 + L1P2 LINE L1 4660 4926 -1228 3339 46 0 5 chr2 3713754 3714171 -246973683 - L1PA5 LINE L1 -2 6152 5738 11533 179 49 23 chr2 3714171 3714765 -246973089 + L1PA5 LINE L1 4926 5733 -421 2974 152 26 8 chr2 3714743 3715520 -246972334 + L1PB4 LINE L1 4988 5774 -382 * 297 0 0 0 chr2 3715520 3715553 -246972301 + (TA)n Simple_repeat Simple_repeat 2 34 0 1230 160 27 114 chr2 3715867 3715963 -246971891 + L1PB4 LINE L1 5782 5885 -271 305 70 0 0 chr2 3715963 3716006 -246971848 + MADE1 DNA Mariner 35 77 -3 1230 160 27 114 chr2 3716006 3716284 -246971570 + L1PB4 LINE L1 5885 6156 0 2591 152 16 4 chr2 3716326 3717183 -246970671 + L1P4 LINE L1 4828 5692 -473 1740 175 10 0 chr2 3717186 3717478 -246970376 + AluJb SINE Alu 1 295 -17 882 172 0 0 chr2 3717698 3717867 -246969987 - L1MA5 LINE L1 0 7362 7194 4644 62 8 8 chr2 3717867 3718477 -246969377 + L1PA7 LINE L1 5543 6153 -1 410 173 0 0 chr2 3718479 3718560 -246969294 - L1MA5 LINE L1 -152 7210 7130 266 51 26 0 chr2 3718575 3718614 -246969240 - MADE1 DNA Mariner -40 40 1 4152 153 14 34 chr2 3718615 3719573 -246968281 - L1MA5 LINE L1 -234 7128 6207 436 50 0 200 chr2 3719573 3719673 -246968181 + MADE1 DNA Mariner 1 80 0 4152 153 14 34 chr2 3719673 3720248 -246967606 - L1MA5 LINE L1 -1155 6207 5622 1026 237 3 61 chr2 3720569 3720881 -246966973 - L1M2b LINE L1 -6915 294 1 412 222 18 66 chr2 3720974 3721141 -246966713 - L1MC4 LINE L1 -970 7072 6914 261 274 102 21 chr2 3721194 3721380 -246966474 - L1M4 LINE L1 -1817 4329 4129 249 119 0 0 chr2 3721511 3721553 -246966301 + (TC)n Simple_repeat Simple_repeat 1 42 0 458 247 100 20 chr2 3721565 3721816 -246966038 - L1M4 LINE L1 -2195 3951 3681 266 325 9 0 chr2 3722861 3722975 -246964879 - MER94 DNA DNA -19 115 1 227 271 76 34 chr2 3723314 3723432 -246964422 + MIR SINE MIR 106 228 -34 336 193 0 0 chr2 3724484 3724541 -246963313 - L2 LINE L2 -9 3304 3248 414 296 0 7 chr2 3724926 3725229 -246962625 + (CA)n Simple_repeat Simple_repeat 1 300 0 437 328 0 11 chr2 3725242 3725419 -246962435 + (CA)n Simple_repeat Simple_repeat 1 175 0 9261 195 48 29 chr2 3726289 3729100 -246958754 - L1MA5 LINE L1 -1603 5605 1810 2199 123 6 25 chr2 3729100 3729418 -246958436 + AluSx SINE Alu 1 312 0 9261 195 48 29 chr2 3729418 3730868 -246956986 - L1MA5 LINE L1 -5398 1810 390 2162 77 37 3 chr2 3930918 3931216 -246756638 + AluSx SINE Alu 1 308 -4 394 208 69 10 chr2 3931734 3931835 -246756019 - L1MC/D LINE L1 -2017 5768 5662 276 197 70 14 chr2 3931934 3932005 -246755849 + MER58C DNA MER1_type 127 201 -14 210 309 52 0 chr2 3933085 3933182 -246754672 + MIR SINE MIR 151 252 -10 243 267 0 69 chr2 3933383 3933499 -246754355 + G-rich Low_complexity Low_complexity 6 113 0 686 168 18 13 chr2 3934922 3935153 -246752701 + (CCCA)n Simple_repeat Simple_repeat 1 232 0 484 243 12 0 chr2 3935171 3935340 -246752514 + (TCCA)n Simple_repeat Simple_repeat 1 171 0 * 582 188 28 11 chr2 3935313 3935489 -246752365 + (CCCA)n Simple_repeat Simple_repeat 2 180 0 192 301 55 0 chr2 3940210 3940283 -246747571 - L2 LINE L2 -220 3052 2976 476 265 49 54 chr2 3942250 3942454 -246745400 - MIR SINE MIR -40 222 20 270 302 129 14 chr2 3947686 3947825 -246740029 - MIR SINE MIR -1 261 107 1315 213 33 26 chr2 3947986 3948291 -246739563 - MER44D DNA MER2_type -30 579 3 450 0 0 0 chr2 3948301 3948351 -246739503 + (TG)n Simple_repeat Simple_repeat 2 51 0 406 298 78 5 chr2 3948733 3948924 -246738930 + MIR SINE MIR 36 240 -22 205 216 83 49 chr2 3949195 3949309 -246738545 + MIR SINE MIR 11 139 -69 2205 104 0 0 chr2 3950690 3950988 -246736866 + AluSg SINE Alu 6 303 -7 357 323 110 16 chr2 3951428 3951714 -246736140 - L1ME LINE L1 -285 5836 5520 375 295 65 35 chr2 3952065 3952265 -246735589 - L2 LINE L2 -4 3309 3104 233 371 32 27 chr2 3952561 3952747 -246735107 - L2 LINE L2 -629 2685 2499 1737 141 0 14 chr2 3953316 3953593 -246734261 + AluSx SINE Alu 1 273 -39 1673 151 3 49 chr2 3955560 3955864 -246731990 + AluJo SINE Alu 1 290 -22 6698 196 160 9 chr2 3955912 3957544 -246730310 + L1PBa LINE L1 7 1884 -4979 3685 133 22 8 chr2 3957546 3958575 -246729279 + L1P5 LINE L1 4751 5794 -357 441 0 0 0 chr2 3958575 3958624 -246729230 + (TA)n Simple_repeat Simple_repeat 2 50 0 3685 133 22 8 chr2 3958624 3958651 -246729203 + L1P5 LINE L1 5794 5819 -332 2131 114 0 16 chr2 3960259 3960575 -246727279 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 3960575 3960596 -246727258 + AT_rich Low_complexity Low_complexity 1 21 0 1694 229 8 30 chr2 3961350 3961722 -246726132 + MLT1A1 LTR MaLR 1 364 -1 21 36 0 0 chr2 3962000 3962028 -246725826 + AT_rich Low_complexity Low_complexity 1 28 0 296 48 24 0 chr2 3962057 3962099 -246725755 + (TTTTA)n Simple_repeat Simple_repeat 1 43 0 231 114 0 0 chr2 3962100 3962135 -246725719 + (CGTTG)n Simple_repeat Simple_repeat 1 35 0 1928 150 0 0 chr2 3962137 3962424 -246725430 - AluSx SINE Alu -25 287 1 1433 176 3 102 chr2 3962689 3963013 -246724841 + AluJb SINE Alu 1 292 -20 393 136 0 0 chr2 3963649 3963715 -246724139 + (GGGA)n Simple_repeat Simple_repeat 1 66 0 210 240 0 20 chr2 3965970 3966020 -246721834 + CT-rich Low_complexity Low_complexity 6 54 0 2145 96 10 0 chr2 3967038 3967340 -246720514 - AluSp SINE Alu -8 305 1 1830 143 24 0 chr2 3968068 3968355 -246719499 - AluSx SINE Alu -16 296 3 1224 266 65 54 chr2 3968382 3968919 -246718935 - L1ME1 LINE L1 -35 6131 5589 23 0 0 0 chr2 3969360 3969383 -246718471 + AT_rich Low_complexity Low_complexity 1 23 0 293 285 81 16 chr2 3970550 3970673 -246717181 - MIR SINE MIR -107 155 25 1837 130 74 0 chr2 3970728 3971012 -246716842 + AluSx SINE Alu 1 305 -7 207 0 0 0 chr2 3973114 3973137 -246714717 + (A)n Simple_repeat Simple_repeat 1 23 0 282 344 33 0 chr2 3973349 3973471 -246714383 - L2 LINE L2 -5 3308 3183 390 338 24 29 chr2 3975019 3975226 -246712628 + MIR SINE MIR 51 256 -6 1443 103 15 15 chr2 3979226 3979429 -246708425 + AluSq SINE Alu 2 204 -109 242 311 25 43 chr2 3980217 3980378 -246707476 - MIR3 SINE MIR -3 205 48 1657 156 33 0 chr2 3982785 3983029 -246704825 + AluJb SINE Alu 13 264 -48 667 224 44 6 chr2 3985527 3985710 -246702144 - L1MC4a LINE L1 -1951 5857 5668 333 195 37 49 chr2 3986550 3986632 -246701222 - L1MC4 LINE L1 -1326 6716 6636 218 269 0 0 chr2 3986940 3986992 -246700862 + GA-rich Low_complexity Low_complexity 1 52 0 553 271 109 35 chr2 3987469 3987809 -246700045 - MLT1J1 LTR MaLR -2 444 80 528 325 92 14 chr2 3989007 3989520 -246698334 - HAL1 LINE L1 -988 1519 967 2380 71 0 20 chr2 3990905 3991232 -246696622 + AluY SINE Alu 1 321 0 196 244 233 11 chr2 3991255 3991345 -246696509 - MIR SINE MIR -133 129 20 396 233 0 69 chr2 3991392 3991581 -246696273 + (CACAC)n Simple_repeat Simple_repeat 2 177 0 391 257 5 59 chr2 3991619 3991806 -246696048 + (CACAC)n Simple_repeat Simple_repeat 2 178 0 191 150 25 25 chr2 3992509 3992549 -246695305 - L2 LINE L2 -6 3307 3268 1036 252 66 7 chr2 3992561 3992835 -246695019 + L1MD2 LINE L1 6060 6349 -10 567 265 117 47 chr2 3993795 3994154 -246693700 - MLT1J2 LTR MaLR 0 450 67 757 160 56 0 chr2 3994297 3994422 -246693432 + AluJb SINE Alu 2 133 -179 1870 164 16 3 chr2 3994438 3994742 -246693112 + AluJb SINE Alu 1 308 -4 282 315 40 20 chr2 3994912 3995061 -246692793 + L1ME LINE L1 333 484 -5912 1648 198 60 11 chr2 3995678 3996031 -246691823 - MLT1A2 LTR MaLR -4 370 1 862 270 35 76 chr2 3996038 3996138 -246691716 + L1ME LINE L1 793 896 -5513 1038 212 38 19 chr2 3996138 3996350 -246691504 - MER20 DNA MER1_type -3 216 1 862 270 35 76 chr2 3996350 3996853 -246691001 + L1ME LINE L1 896 1371 -5038 2313 256 44 13 chr2 3996856 3997621 -246690233 + L1M4 LINE L1 3500 4288 -1858 1409 221 143 20 chr2 3997623 3998111 -246689743 + L1M4 LINE L1 4769 5316 -830 829 191 114 0 chr2 3998109 3998329 -246689525 - L1PA16 LINE L1 -1 6165 5921 * 5078 159 36 22 chr2 4002910 4002974 -246684880 - L1MA9 LINE L1 -5 6307 6245 375 23 0 0 chr2 4002974 4003018 -246684836 + (TG)n Simple_repeat Simple_repeat 1 44 0 1770 190 0 0 chr2 4003018 4003297 -246684557 - AluJo SINE Alu -33 279 1 5078 159 36 22 chr2 4003297 4004444 -246683410 - L1MA9 LINE L1 -66 6246 5071 2402 119 34 8 chr2 4004446 4004800 -246683054 + THE1B LTR MaLR 1 363 -1 9426 114 59 45 chr2 4004801 4006359 -246681495 + THE1B-int LTR MaLR 1 1580 0 2169 137 35 30 chr2 4006359 4006732 -246681122 + THE1C LTR MaLR 1 375 0 7292 126 18 129 chr2 4006732 4008334 -246679520 - Tigger4(Zombi) DNA MER2_type -1304 1427 4 8643 186 39 14 chr2 4008337 4010307 -246677547 - L1MA9 LINE L1 -1231 4915 2897 471 256 93 69 chr2 4010785 4011206 -246676648 - L1ME4a LINE L1 -74 6047 5617 701 289 39 10 chr2 4011647 4011851 -246676003 - MER58A DNA MER1_type 0 224 15 213 154 0 0 chr2 4013169 4013208 -246674646 + (CA)n Simple_repeat Simple_repeat 1 39 0 895 243 38 0 chr2 4014494 4014704 -246673150 - MER20 DNA MER1_type 0 219 2 1007 214 43 12 chr2 4016589 4016846 -246671008 + MLT1B LTR MaLR 1 265 -125 889 179 11 11 chr2 4016889 4017068 -246670786 + MLT1B LTR MaLR 23 201 -189 485 268 94 24 chr2 4018341 4018595 -246669259 + HAL1 LINE L1 578 849 -1658 664 287 142 12 chr2 4018832 4019170 -246668684 + HAL1 LINE L1 1162 1543 -964 476 284 130 41 chr2 4019185 4019445 -246668409 + HAL1 LINE L1 1584 1874 -633 7136 92 34 9 chr2 4019445 4020390 -246667464 - LTR5 LTR ERVK -1 968 1 476 284 130 41 chr2 4020390 4020421 -246667433 + HAL1 LINE L1 1874 1901 -606 1262 220 116 25 chr2 4020588 4020984 -246666870 - MLT1C LTR MaLR 0 467 36 289 279 0 0 chr2 4021289 4021375 -246666479 + LTR67 LTR ERVL 468 553 -4 361 82 0 0 chr2 4021525 4021574 -246666280 - MADE1 DNA Mariner 0 80 32 490 284 28 11 chr2 4025019 4025195 -246662659 + (TG)n Simple_repeat Simple_repeat 1 179 0 407 220 28 34 chr2 4025233 4025566 -246662288 + (TATG)n Simple_repeat Simple_repeat 1 331 0 337 246 23 14 chr2 4025573 4025934 -246661920 + (TG)n Simple_repeat Simple_repeat 1 364 0 216 149 0 0 chr2 4026604 4026651 -246661203 + (A)n Simple_repeat Simple_repeat 1 47 0 2238 125 0 3 chr2 4026653 4026965 -246660889 + AluSx SINE Alu 1 311 -1 214 235 86 37 chr2 4027149 4027230 -246660624 - MIR SINE MIR -58 150 66 886 294 95 33 chr2 4027519 4028237 -246659617 + HAL1 LINE L1 597 1358 -1149 421 267 59 72 chr2 4028333 4028554 -246659300 + MIR SINE MIR 45 262 0 470 274 150 16 chr2 4028560 4028866 -246658988 + HAL1 LINE L1 1441 1787 -720 773 244 101 0 chr2 4029166 4029383 -246658471 + MIR SINE MIR 14 252 -10 720 225 62 72 chr2 4029732 4030125 -246657729 + LTR42 LTR ERVL 4 478 -17 2677 87 6 0 chr2 4030158 4030515 -246657339 - THE1B LTR MaLR -5 359 1 186 356 37 37 chr2 4030980 4031115 -246656739 + L2 LINE L2 3138 3272 0 209 189 0 0 chr2 4031117 4031154 -246656700 + (TGAG)n Simple_repeat Simple_repeat 1 37 0 263 266 156 18 chr2 4031229 4031338 -246656516 - L2 LINE L2 -1 3271 3148 565 348 74 40 chr2 4033102 4033479 -246654375 + HAL1 LINE L1 1039 1428 -1079 2303 123 0 0 chr2 4033482 4033791 -246654063 - AluSx SINE Alu -3 309 1 405 293 151 52 chr2 4033801 4034166 -246653688 + L1MC4a LINE L1 5766 6166 -1642 429 283 123 42 chr2 4034185 4034397 -246653457 - MLT1I LTR MaLR -66 343 115 1100 244 139 11 chr2 4034731 4035496 -246652358 + L1M4 LINE L1 1643 2527 -3855 871 243 17 0 chr2 4035505 4035686 -246652168 + MER8 DNA MER2_type 1 184 -55 2004 209 51 6 chr2 4035686 4036159 -246651695 + L1M4 LINE L1 4939 5432 -950 706 190 8 0 chr2 4036159 4036280 -246651574 + FLAM_C SINE Alu 9 130 -13 1716 197 0 10 chr2 4036284 4036578 -246651276 + AluJo SINE Alu 3 293 -19 1671 166 40 3 chr2 4036581 4036978 -246650876 + L1M4 LINE L1 5456 5865 -555 229 328 46 15 chr2 4036988 4037119 -246650735 + HAL1b LINE L1 387 521 -827 265 301 52 22 chr2 4037657 4037793 -246650061 + L1M4c LINE L1 3831 3970 -2412 1173 325 130 44 chr2 4037802 4038082 -246649772 + L1M4c LINE L1 4109 4364 -2018 282 29 0 0 chr2 4038082 4038117 -246649737 + (CA)n Simple_repeat Simple_repeat 2 36 0 1173 325 130 44 chr2 4038117 4038731 -246649123 + L1M4c LINE L1 4364 5080 -1302 1086 248 105 16 chr2 4038748 4039062 -246648792 + MER2 DNA MER2_type 1 342 -2 744 315 22 8 chr2 4039094 4039327 -246648527 + MIR SINE MIR 11 241 -21 222 307 0 50 chr2 4040013 4040114 -246647740 + (CACG)n Simple_repeat Simple_repeat 3 98 0 4151 154 37 47 chr2 4043570 4044564 -246643290 - MER11C LTR ERVK 0 1071 1 2463 39 3 3 chr2 4046989 4047272 -246640582 - AluY SINE Alu -28 283 1 467 312 40 6 chr2 4048084 4048257 -246639597 - MIR SINE MIR -26 236 58 334 274 150 65 chr2 4048769 4049109 -246638745 + MLT1E LTR MaLR 285 592 -1 273 270 108 9 chr2 4049194 4049305 -246638549 - MIR SINE MIR -59 149 28 654 228 206 9 chr2 4050429 4050648 -246637206 + MLT1L LTR MaLR 349 610 -5 497 298 44 39 chr2 4050750 4050955 -246636899 + MIR SINE MIR 47 252 -10 186 143 0 0 chr2 4051803 4051838 -246636016 + (CCCA)n Simple_repeat Simple_repeat 4 38 0 372 274 177 26 chr2 4052623 4052933 -246634921 + MARNA DNA Mariner 26 382 -204 837 274 95 3 chr2 4053715 4054094 -246633760 + L1MDa LINE L1 16 429 -6111 2243 201 52 17 chr2 4054329 4054847 -246633007 + L1MC1 LINE L1 5786 6321 -12 272 245 13 8 chr2 4055007 4055103 -246632751 - MLT1J2 LTR MaLR -309 141 70 323 158 11 116 chr2 4055226 4055292 -246632562 - L1PA15 LINE L1 -172 5993 5938 2336 86 3 29 chr2 4055292 4055606 -246632248 - AluSx SINE Alu -6 306 1 323 158 11 116 chr2 4055606 4055634 -246632220 - L1PA15 LINE L1 -227 5938 5909 948 153 25 0 chr2 4055642 4055805 -246632049 + L1PA15 LINE L1 5995 6161 -4 23 0 0 0 chr2 4055806 4055829 -246632025 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr2 4057998 4058042 -246629812 + AT_rich Low_complexity Low_complexity 1 44 0 2015 66 4 0 chr2 4058518 4058775 -246629079 - L1PA5 LINE L1 0 6154 5897 320 124 8 63 chr2 4059091 4059163 -246628691 + MLT1A2 LTR MaLR 1 67 -307 1578 222 18 0 chr2 4059166 4059499 -246628355 - MER47A DNA MER2_type 0 366 28 1210 198 62 21 chr2 4059516 4059804 -246628050 + MLT1A2 LTR MaLR 75 374 0 1637 126 20 0 chr2 4064535 4064782 -246623072 + MER1B DNA MER1_type 1 252 -87 293 259 77 21 chr2 4064898 4065041 -246622813 + ERVL LTR ERVL 2543 2693 -3071 569 210 109 0 chr2 4065081 4065219 -246622635 + MER58C DNA MER1_type 61 213 -2 365 314 26 0 chr2 4066264 4066420 -246621434 + ERVL LTR ERVL 3153 3312 -2342 358 154 15 70 chr2 4066552 4066900 -246620954 + (CTCA)n Simple_repeat Simple_repeat 1 328 0 431 329 7 0 chr2 4067164 4067319 -246620535 + ERVL LTR ERVL 3777 3932 -1832 255 145 197 40 chr2 4067594 4067637 -246620217 + LTR33A LTR ERVL 434 469 -54 15088 127 22 17 chr2 4067637 4070043 -246617811 - Tigger1 DNA MER2_type 0 2418 1 255 145 197 40 chr2 4070043 4070075 -246617779 + LTR33A LTR ERVL 469 521 -2 199 377 8 16 chr2 4070127 4070249 -246617605 - L2 LINE L2 -950 2364 2244 710 327 111 44 chr2 4070360 4071306 -246616548 + L1MEd LINE L1 79 1087 -5032 548 296 145 88 chr2 4071359 4072253 -246615601 + L1MEd LINE L1 1234 2178 -4132 564 89 0 0 chr2 4072406 4072485 -246615369 + (GGGA)n Simple_repeat Simple_repeat 3 81 0 2370 156 19 28 chr2 4073343 4073540 -246614314 + MSTB LTR MaLR 2 199 -227 1881 124 6 70 chr2 4073540 4073684 -246614170 + AluSx SINE Alu 3 155 -157 2290 108 0 0 chr2 4073684 4073989 -246613865 + AluSx SINE Alu 1 305 -7 1881 124 6 70 chr2 4073989 4074174 -246613680 + AluSx SINE Alu 155 311 -1 2370 156 19 28 chr2 4074174 4074405 -246613449 + MSTB LTR MaLR 199 426 0 7793 184 61 9 chr2 4074407 4075975 -246611879 + MSTB-int LTR MaLR 3 1651 0 2023 162 70 15 chr2 4075975 4076377 -246611477 + MSTB LTR MaLR 1 424 -2 209 289 64 80 chr2 4076810 4076997 -246610857 - MIR3 SINE MIR -17 191 8 259 320 150 10 chr2 4077281 4077481 -246610373 + MIR SINE MIR 32 259 -3 2298 124 0 0 chr2 4077681 4077987 -246609867 + AluSx SINE Alu 1 306 -6 2531 131 48 15 chr2 4078253 4078826 -246609028 + MER4E LTR ERV1 1 756 -10 2475 209 48 52 chr2 4079702 4080414 -246607440 + L1MD2 LINE L1 5650 6358 -1 2303 107 13 0 chr2 4080550 4080850 -246607004 - AluSx SINE Alu -4 308 5 237 351 0 11 chr2 4081168 4081262 -246606592 + (CA)n Simple_repeat Simple_repeat 2 94 0 247 316 94 0 chr2 4081769 4081886 -246605968 + L2 LINE L2 3140 3267 -5 243 0 0 0 chr2 4084290 4084317 -246603537 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 803 257 72 61 chr2 4085001 4085495 -246602359 + L1ME LINE L1 28 5189 -957 2284 105 0 0 chr2 4085582 4085868 -246601986 + AluSg SINE Alu 1 286 -24 393 75 0 0 chr2 4085871 4085924 -246601930 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 1202 234 49 28 chr2 4085941 4086384 -246601470 + L1ME LINE L1 5188 5638 -528 718 341 63 14 chr2 4086751 4087246 -246600608 + HERV16 LTR ERVL 1765 2283 -3481 716 347 63 6 chr2 4087319 4087682 -246600172 + HERV16 LTR ERVL 2357 2740 -2256 349 309 18 18 chr2 4087809 4087919 -246599935 + HERV16 LTR ERVL 2953 3062 -1934 428 336 77 6 chr2 4087980 4088343 -246599511 + HERV16 LTR ERVL 3143 3531 -1954 2153 164 59 82 chr2 4089224 4089784 -246598070 - L1MA8 LINE L1 -17 6274 5728 2214 62 29 0 chr2 4090056 4090356 -246597498 - AluSg SINE Alu 0 308 1 487 249 40 57 chr2 4091100 4091277 -246596577 - MIR3 SINE MIR -1 207 34 253 274 38 28 chr2 4092481 4092587 -246595267 + HERV16 LTR ERVL 2046 2152 -2844 313 163 35 47 chr2 4094487 4094573 -246593281 + MIR SINE MIR 60 144 -118 786 61 0 0 chr2 4096349 4096448 -246591406 - THE1A LTR MaLR -256 99 1 855 226 79 39 chr2 4096589 4096868 -246590986 - L1MB2 LINE L1 -53 6118 5829 926 170 0 0 chr2 4096948 4097089 -246590765 + AluJb SINE Alu 1 141 -171 2313 108 0 0 chr2 4097094 4097390 -246590464 + AluY SINE Alu 1 296 -15 2228 49 0 0 chr2 4097421 4097708 -246590146 + L1PA8 LINE L1 5885 6171 -1 1195 149 0 0 chr2 4097786 4097960 -246589894 + AluJb SINE Alu 129 302 -10 230 290 86 11 chr2 4097972 4098065 -246589789 - MLT1D LTR MaLR 0 505 406 * 889 251 146 25 chr2 4098060 4098466 -246589388 - MLT1E2 LTR MaLR -154 470 9 364 334 58 8 chr2 4098495 4098785 -246589069 - L2 LINE L2 -220 3052 2687 2940 197 20 6 chr2 4101034 4101685 -246586169 + L1MB3 LINE L1 5520 6179 -4 251 228 0 0 chr2 4102145 4102202 -246585652 + L1MB7 LINE L1 5350 5406 -764 233 186 0 0 chr2 4102237 4102280 -246585574 + L1MB7 LINE L1 5364 5406 -764 225 209 0 0 chr2 4102319 4102362 -246585492 + L1MB7 LINE L1 5364 5406 -764 1133 195 8 7 chr2 4102402 4102656 -246585198 + L1MB7 LINE L1 5363 5585 -599 2299 116 0 26 chr2 4102671 4102725 -246585129 - L1PB1 LINE L1 -2 6149 6095 2323 114 0 0 chr2 4102725 4103031 -246584823 - AluSx SINE Alu -6 306 1 2299 116 0 26 chr2 4103031 4103354 -246584500 - L1PB1 LINE L1 -56 6095 5782 419 234 43 21 chr2 4103354 4103439 -246584415 + L1MC4 LINE L1 6614 6703 -1339 1270 73 0 6 chr2 4103439 4103616 -246584238 - L1PB1 LINE L1 -359 5792 5617 * 1798 251 38 36 chr2 4103611 4104015 -246583839 + L1MB7 LINE L1 5591 5998 -186 1704 122 35 52 chr2 4104015 4104301 -246583553 + AluJb SINE Alu 6 286 -26 1798 251 38 36 chr2 4104301 4104477 -246583377 + L1MB7 LINE L1 5998 6172 -12 2246 93 0 0 chr2 4104514 4104793 -246583061 - AluSc SINE Alu -30 279 1 506 237 0 0 chr2 4105544 4105798 -246582056 + (CA)n Simple_repeat Simple_repeat 1 254 0 195 250 0 0 chr2 4105822 4105922 -246581932 + (CA)n Simple_repeat Simple_repeat 1 100 0 336 222 3 45 chr2 4105970 4106351 -246581503 + (CA)n Simple_repeat Simple_repeat 1 364 0 200 275 17 6 chr2 4106406 4106584 -246581270 + (CA)n Simple_repeat Simple_repeat 1 180 0 305 290 196 0 chr2 4107311 4107449 -246580405 - MIR SINE MIR -20 242 78 288 295 95 0 chr2 4109789 4109894 -246577960 + L2 LINE L2 3108 3222 -50 280 252 0 15 chr2 4111553 4111684 -246576170 + (CA)n Simple_repeat Simple_repeat 1 129 0 566 268 82 55 chr2 4112211 4112431 -246575423 + MIR SINE MIR 20 245 -17 353 336 34 0 chr2 4113911 4114060 -246573794 + MIR SINE MIR 58 211 -51 412 280 177 0 chr2 4114316 4114491 -246573363 + MIR SINE MIR 57 262 0 8801 101 4 4 chr2 4316166 4317449 -246370405 - L1P LINE L1 -1759 4387 3105 205 196 11 11 chr2 4317551 4317643 -246370211 + (CATTC)n Satellite Satellite 3 94 0 731 175 0 29 chr2 4317654 4318174 -246369680 + (CATTC)n Satellite Satellite 1 505 0 709 177 2 2 chr2 4318228 4318734 -246369120 + (CATTC)n Satellite Satellite 1 506 0 389 178 8 0 chr2 4318747 4318865 -246368989 + (CATTC)n Satellite Satellite 3 121 0 181 266 166 71 chr2 4319513 4319821 -246368033 - L3 LINE CR1 -246 1331 995 366 42 0 0 chr2 4319911 4319959 -246367895 + (CA)n Simple_repeat Simple_repeat 1 48 0 24 53 0 0 chr2 4319996 4320034 -246367820 + AT_rich Low_complexity Low_complexity 1 38 0 422 264 4 16 chr2 4320058 4320301 -246367553 - L1MA9 LINE L1 -38 6274 5989 228 67 0 0 chr2 4320448 4320478 -246367376 + (TA)n Simple_repeat Simple_repeat 2 31 0 2242 108 0 0 chr2 4321161 4321458 -246366396 + AluSg SINE Alu 6 302 -8 27 29 0 0 chr2 4321458 4321492 -246366362 + AT_rich Low_complexity Low_complexity 1 34 0 290 247 47 12 chr2 4321759 4321844 -246366010 + MIR SINE MIR 104 191 -71 415 217 12 12 chr2 4321855 4321938 -246365916 + MER30 DNA MER1_type 148 230 0 265 312 35 29 chr2 4321955 4322128 -246365726 + L1MEc LINE L1 1908 2081 -4315 763 216 161 6 chr2 4322288 4322609 -246365245 - Tigger6 DNA MER2_type 0 1597 1148 11792 153 32 5 chr2 4322653 4322986 -246364868 + Tigger1 DNA MER2_type 1 324 -2094 2183 125 143 8 chr2 4322986 4323363 -246364491 + MSTA LTR MaLR 1 428 0 11792 153 32 5 chr2 4323363 4325009 -246362845 + Tigger1 DNA MER2_type 324 2033 -385 3554 194 28 14 chr2 4325110 4326333 -246361521 - L1MA9 LINE L1 -432 5880 4636 1651 174 57 3 chr2 4326333 4326615 -246361239 + AluSp SINE Alu 1 297 -16 3554 194 28 14 chr2 4326615 4326743 -246361111 - L1MA9 LINE L1 -1676 4636 4511 293 0 27 0 chr2 4326745 4326782 -246361072 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 4582 17 0 0 chr2 4326782 4327304 -246360550 - L1PA2 LINE L1 -13 6142 5621 3081 15 0 0 chr2 4327304 4327691 -246360163 + L1PA2 LINE L1 5227 5613 -542 1227 183 28 37 chr2 4327687 4327882 -246359972 - L1MA9 LINE L1 -1624 4522 4330 * 2159 122 0 0 chr2 4327882 4328177 -246359677 + AluSx SINE Alu 11 305 -7 1227 183 28 37 chr2 4328177 4328303 -246359551 - L1MA9 LINE L1 -1816 4330 4204 368 241 127 16 chr2 4328511 4328756 -246359098 - L1M4 LINE L1 -3070 3076 2805 308 347 141 38 chr2 4329268 4329637 -246358217 - L2 LINE L2 -4 3268 2862 1711 164 66 101 chr2 4329847 4330273 -246357581 - MSTB LTR MaLR -15 411 1 359 352 73 24 chr2 4330859 4331106 -246356748 - L2 LINE L2 -468 2846 2588 1106 264 151 37 chr2 4331120 4331540 -246356314 + MLT2B1 LTR ERVL 3 482 -38 955 89 13 0 chr2 4331540 4331697 -246356157 + (TCTA)n Simple_repeat Simple_repeat 4 162 0 1106 264 151 37 chr2 4331697 4331741 -246356113 + MLT2B1 LTR ERVL 482 520 0 3531 176 42 90 chr2 4332094 4333365 -246354489 + L1PB3 LINE L1 4942 6154 0 2185 92 0 7 chr2 4334314 4334608 -246353246 + AluSc SINE Alu 1 292 -17 249 378 44 7 chr2 4335223 4335358 -246352496 + MIR SINE MIR 46 185 -77 206 62 31 0 chr2 4335554 4335586 -246352268 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 243 136 45 0 chr2 4335587 4335631 -246352223 - MER5B DNA MER1_type -132 46 1 327 280 64 45 chr2 4335659 4335816 -246352038 - MER105 DNA DNA -1 203 44 457 282 48 62 chr2 4335880 4336089 -246351765 + MER63A DNA MER1_type 2 207 -3 200 322 67 22 chr2 4336662 4336752 -246351102 + L3 LINE CR1 1169 1262 -315 432 294 32 24 chr2 4336854 4336980 -246350874 + L3 LINE CR1 1450 1576 -1 607 116 45 18 chr2 4337349 4337461 -246350393 + L1PB2 LINE L1 5677 5791 -360 254 160 13 53 chr2 4337573 4337648 -246350206 + (TA)n Simple_repeat Simple_repeat 1 72 0 2175 97 54 26 chr2 4337649 4337998 -246349856 + L1PB2 LINE L1 5789 6147 -4 1698 130 85 4 chr2 4338627 4338897 -246348957 - AluSx SINE Alu -12 300 9 315 273 0 0 chr2 4339354 4339431 -246348423 - L1MC4 LINE L1 -1350 6692 6616 27 29 0 0 chr2 4339464 4339498 -246348356 + AT_rich Low_complexity Low_complexity 1 34 0 184 344 16 88 chr2 4339561 4339686 -246348168 - MIR SINE MIR -59 149 34 24 32 0 0 chr2 4340329 4340360 -246347494 + AT_rich Low_complexity Low_complexity 1 31 0 207 315 82 86 chr2 4341629 4341896 -246345958 + L2 LINE L2 2228 2493 -821 229 316 158 8 chr2 4341962 4342095 -246345759 - MIR SINE MIR 0 262 110 234 354 85 0 chr2 4342287 4342369 -246345485 - L2 LINE L2 -12 3260 3172 27 0 0 0 chr2 4343928 4343955 -246343899 + AT_rich Low_complexity Low_complexity 1 27 0 6776 70 13 1 chr2 4344928 4346499 -246341355 - L1PA7 LINE L1 -4 6150 4564 16969 29 0 0 chr2 4346599 4349383 -246338471 + L1PA2 LINE L1 3372 6155 0 29 47 0 0 chr2 4349764 4349807 -246338047 + AT_rich Low_complexity Low_complexity 1 43 0 190 308 199 13 chr2 4350272 4350428 -246337426 + MIR SINE MIR 37 221 -41 220 363 12 0 chr2 4350664 4350744 -246337110 - L2 LINE L2 -212 3060 2980 1533 200 64 6 chr2 4352241 4352586 -246335268 + MLT2D LTR ERVL 1 365 -49 280 228 51 13 chr2 4353554 4353633 -246334221 + MIR SINE MIR 110 191 -71 944 270 58 70 chr2 4354149 4354649 -246333205 + MLT1L LTR MaLR 79 572 -43 792 253 13 17 chr2 4355134 4355367 -246332487 - MER72 LTR ERV1 -243 479 248 206 313 50 38 chr2 4357001 4357081 -246330773 - L2 LINE L2 -5 3267 3187 289 258 0 0 chr2 4357512 4357605 -246330249 - Charlie7 DNA MER1_type -1937 675 583 435 218 122 20 chr2 4357670 4357817 -246330037 - Charlie7 DNA MER1_type -2130 482 321 23 78 0 0 chr2 4357954 4358005 -246329849 + AT_rich Low_complexity Low_complexity 1 51 0 357 314 47 23 chr2 4358779 4358951 -246328903 + MIR SINE MIR 28 203 -59 875 254 6 0 chr2 4359698 4359879 -246327975 + MER5A DNA MER1_type 8 189 0 224 254 51 0 chr2 4360347 4360406 -246327448 - MIR SINE MIR -55 153 92 34 65 0 0 chr2 4360760 4360822 -246327032 + AT_rich Low_complexity Low_complexity 1 62 0 214 278 11 78 chr2 4360876 4360966 -246326888 + L2 LINE L2 3189 3272 0 1492 204 6 19 chr2 4362282 4362595 -246325259 - AluJb SINE Alu -1 311 3 255 247 78 26 chr2 4362635 4362712 -246325142 - MIR SINE MIR -179 83 3 255 321 46 30 chr2 4362834 4362965 -246324889 + MIR SINE MIR 99 231 -31 279 315 94 26 chr2 4365465 4365732 -246322122 - L1MEc LINE L1 -4579 1817 1533 675 212 0 0 chr2 4365753 4365871 -246321983 + FLAM_C SINE Alu 1 118 -15 319 270 86 40 chr2 4366016 4366190 -246321664 - L1M4 LINE L1 -2281 3865 3684 337 320 99 41 chr2 4366276 4366641 -246321213 - L1M4 LINE L1 -2642 3504 3119 289 289 41 38 chr2 4367154 4367420 -246320434 - L1M4 LINE L1 -3523 2623 2357 457 341 102 23 chr2 4369458 4369939 -246317915 - L1ME4a LINE L1 -24 6097 5579 1109 254 0 0 chr2 4370018 4370258 -246317596 + MLT1A1 LTR MaLR 125 364 -1 2131 155 111 5 chr2 4370413 4370800 -246317054 - MSTA LTR MaLR 0 428 1 8336 193 25 11 chr2 4370800 4372429 -246315425 - MSTA-int LTR MaLR 0 1651 1 1562 202 141 5 chr2 4372429 4372806 -246315048 - MSTA LTR MaLR 0 428 1 3523 278 49 43 chr2 4374363 4374423 -246313431 + L1M4 LINE L1 11 69 -6786 1572 206 0 3 chr2 4374423 4374735 -246313119 - AluJo SINE Alu 0 311 1 3523 278 49 43 chr2 4374735 4376423 -246311431 + L1M4 LINE L1 69 1792 -5063 1035 242 50 108 chr2 4376430 4377608 -246310246 + L1M4 LINE L1 2230 3265 -3692 1131 256 99 11 chr2 4377754 4377801 -246310053 + L1M4 LINE L1 3245 3286 -3671 4195 39 8 2 chr2 4377801 4378341 -246309513 + L1PA4 LINE L1 5621 6163 0 1131 256 99 11 chr2 4378341 4378816 -246309038 + L1M4 LINE L1 3286 3814 -3143 2727 225 19 0 chr2 4378879 4379391 -246308463 + L1P4 LINE L1 53 574 -6265 * 3594 228 50 27 chr2 4379380 4380536 -246307318 + L1P4 LINE L1 1849 3031 -3818 4035 203 48 14 chr2 4380536 4380805 -246307049 + L1P4 LINE L1 4935 5193 -1671 1825 176 80 5 chr2 4380805 4381203 -246306651 + MSTA LTR MaLR 1 428 0 4035 203 48 14 chr2 4381203 4382124 -246305730 + L1P4 LINE L1 5193 6163 -701 5011 148 17 1 chr2 4382224 4383057 -246304797 + L1PA16 LINE L1 5312 6157 -9 444 311 12 38 chr2 4383079 4383504 -246304350 + L1M4 LINE L1 3866 4279 -2678 2684 36 0 3 chr2 4383723 4384032 -246303822 - AluY SINE Alu -3 308 1 3987 20 0 0 chr2 4384423 4384881 -246302973 - L1PA3 LINE L1 0 6155 5698 5105 30 0 0 chr2 4384881 4385505 -246302349 + L1P LINE L1 4749 5372 -774 3297 137 32 35 chr2 4386068 4386668 -246301186 - Tigger1 DNA MER2_type 0 2418 1821 1585 85 89 4 chr2 4387535 4387781 -246300073 - L1PA11 LINE L1 -10 6164 5898 5661 156 60 9 chr2 4387781 4387896 -246299958 - Tigger1 DNA MER2_type -581 1837 1729 207 0 0 0 chr2 4387896 4387919 -246299935 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5661 156 60 9 chr2 4387919 4389504 -246298350 - Tigger1 DNA MER2_type -689 1729 1 1651 201 3 7 chr2 4389537 4389835 -246298019 - AluJo SINE Alu -15 297 1 565 278 91 13 chr2 4390131 4390361 -246297493 - MLT1D LTR MaLR 0 505 258 307 294 134 21 chr2 4390475 4390669 -246297185 - LTR33 LTR ERVL -1 520 305 808 219 18 0 chr2 4390849 4391013 -246296841 - FRAM SINE Alu -9 167 1 241 295 79 43 chr2 4393249 4393388 -246294466 + L2 LINE L2 3128 3271 -1 317 185 64 25 chr2 4393428 4393585 -246294269 + (TG)n Simple_repeat Simple_repeat 1 163 0 216 47 78 47 chr2 4393595 4393659 -246294195 + (GTGTG)n Simple_repeat Simple_repeat 4 69 0 482 131 48 51 chr2 4393715 4394008 -246293846 + (GTGTG)n Simple_repeat Simple_repeat 1 292 0 437 97 30 67 chr2 4394021 4394186 -246293668 + (GTGTG)n Simple_repeat Simple_repeat 1 159 0 1135 218 44 21 chr2 4394694 4395028 -246292826 - MLT1A1 LTR MaLR -6 359 3 3801 182 14 7 chr2 4395116 4395826 -246292028 - MER72 LTR ERV1 0 722 8 332 133 84 12 chr2 4396746 4396829 -246291025 - L1P LINE L1 -2914 3232 3144 21 36 0 0 chr2 4396963 4396991 -246290863 + AT_rich Low_complexity Low_complexity 1 28 0 435 294 91 67 chr2 4397301 4397879 -246289975 - L1MC4 LINE L1 0 8042 7311 670 217 88 17 chr2 4397901 4398223 -246289631 + MLT1C LTR MaLR 1 373 -94 228 135 19 58 chr2 4398227 4398279 -246289575 + MLT1C LTR MaLR 336 385 -5 2814 131 7 0 chr2 4398284 4398711 -246289143 + MER57B LTR ERV1 5 434 0 234 261 143 62 chr2 4398755 4398916 -246288938 - L1MC4a LINE L1 -470 7338 7165 687 291 82 12 chr2 4399183 4399513 -246288341 - L1MC4 LINE L1 -985 7057 6705 1878 114 0 84 chr2 4400077 4400420 -246287434 - AluSx SINE Alu 0 317 1 748 221 63 0 chr2 4402565 4402723 -246285131 - FAM SINE Alu -7 168 1 357 222 28 46 chr2 4403140 4403248 -246284606 + MIR3 SINE MIR 97 202 -6 284 330 31 10 chr2 4403398 4403495 -246284359 + L2 LINE L2 3188 3286 -27 403 323 64 30 chr2 4404114 4404380 -246283474 - L1MEc LINE L1 -1800 4415 4141 654 304 48 23 chr2 4404504 4405069 -246282785 - L1MEc LINE L1 -2708 3507 2929 631 297 42 0 chr2 4405091 4405256 -246282598 + MER5A DNA MER1_type 4 175 -14 276 340 55 12 chr2 4405357 4405610 -246282244 - L1MEc LINE L1 -3427 2788 2525 2872 229 74 6 chr2 4405640 4406705 -246281149 - L1MB8 LINE L1 -14 6164 5027 31 0 0 0 chr2 4406708 4406739 -246281115 + AT_rich Low_complexity Low_complexity 1 31 0 297 308 117 10 chr2 4406769 4407256 -246280598 - L1MB8 LINE L1 -3486 2660 2122 517 269 39 6 chr2 4407310 4407466 -246280388 - L1MEc LINE L1 -4670 1726 1566 30 77 0 0 chr2 4408875 4408940 -246278914 + AT_rich Low_complexity Low_complexity 1 65 0 355 258 106 26 chr2 4409300 4409451 -246278403 - L1MEc LINE L1 -4913 1292 1130 2684 98 8 11 chr2 4409463 4409839 -246278015 - THE1C LTR MaLR 0 375 1 6831 113 39 137 chr2 4409866 4410728 -246277126 - THE1C-int LTR MaLR -303 1277 607 412 126 0 105 chr2 4410728 4410823 -246277031 - L1PA10 LINE L1 0 6168 6084 6831 113 39 137 chr2 4410823 4411376 -246276478 - THE1C-int LTR MaLR -973 607 1 2390 133 30 11 chr2 4411376 4411744 -246276110 - THE1C LTR MaLR 0 375 1 385 274 73 66 chr2 4411985 4412244 -246275610 - L1MEc LINE L1 -5278 927 667 2421 178 24 2 chr2 4412398 4412815 -246275039 + MSTB LTR MaLR 1 426 0 1226 225 107 24 chr2 4413593 4413931 -246273923 + MLT1B LTR MaLR 1 366 -24 1106 226 13 57 chr2 4413939 4414240 -246273614 + MLT1A2 LTR MaLR 74 361 -13 2327 110 0 0 chr2 4414511 4414821 -246273033 - AluSx SINE Alu -2 310 1 606 315 36 9 chr2 4415014 4415233 -246272621 - MIR SINE MIR -32 230 6 276 77 0 0 chr2 4416432 4416471 -246271383 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 215 329 89 13 chr2 4418222 4418301 -246269553 + MIR SINE MIR 25 109 -153 272 309 9 27 chr2 4419598 4419708 -246268146 - MLT1F LTR MaLR -82 460 353 521 252 65 0 chr2 4419791 4419930 -246267924 + MSTD LTR MaLR 1 148 -217 668 178 17 0 chr2 4419961 4420079 -246267775 + MSTD LTR MaLR 265 384 -12 429 320 35 58 chr2 4420158 4420417 -246267437 + MIR SINE MIR 10 262 0 200 294 11 43 chr2 4421352 4421536 -246266318 + (CATG)n Simple_repeat Simple_repeat 1 178 0 188 229 42 0 chr2 4423646 4423694 -246264160 - MIR3 SINE MIR -39 169 120 198 103 0 0 chr2 4424109 4424138 -246263716 + (TC)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr2 4424191 4424226 -246263628 + (CA)n Simple_repeat Simple_repeat 2 36 0 1924 186 38 22 chr2 4424995 4425442 -246262412 - L1MA8 LINE L1 -6 6285 5832 2183 157 10 15 chr2 4425442 4425831 -246262023 + L1MA8 LINE L1 5450 5836 -476 1670 146 143 32 chr2 4425914 4426257 -246261597 + MSTA LTR MaLR 19 399 -29 288 0 0 0 chr2 4426257 4426289 -246261565 + (TTA)n Simple_repeat Simple_repeat 2 33 0 5279 91 5 11 chr2 4426289 4427040 -246260814 - L1PA8 LINE L1 -11 6161 5415 525 77 0 0 chr2 4427518 4427583 -246260271 - MER30B DNA MER1_type -125 65 1 342 0 0 0 chr2 4427763 4427801 -246260053 + (TA)n Simple_repeat Simple_repeat 2 39 0 182 292 0 0 chr2 4429841 4429889 -246257965 + L2 LINE L2 3210 3257 -15 1831 214 82 52 chr2 4430568 4430676 -246257178 - L1ME1 LINE L1 -237 5998 5895 1951 125 3 30 chr2 4430676 4430972 -246256882 - AluSx SINE Alu -7 305 18 1831 214 82 52 chr2 4430972 4431426 -246256428 - L1ME1 LINE L1 -340 5895 5456 1925 148 0 0 chr2 4431426 4431732 -246256122 - AluSx SINE Alu 0 306 1 1831 214 82 52 chr2 4431732 4432112 -246255742 - L1ME1 LINE L1 -779 5456 5012 1151 279 38 18 chr2 4432108 4432656 -246255198 - L1ME1 LINE L1 -1647 4568 4010 * 274 269 19 28 chr2 4433030 4433138 -246254716 - L1M4 LINE L1 -969 5177 5071 2831 274 66 37 chr2 4433399 4435183 -246252671 - L1ME1 LINE L1 -2309 3906 2063 315 49 0 0 chr2 4435183 4435224 -246252630 + (TG)n Simple_repeat Simple_repeat 2 42 0 2831 274 66 37 chr2 4435224 4436342 -246251512 - L1ME1 LINE L1 -4152 2063 979 358 324 41 82 chr2 4436364 4436805 -246251049 - L1ME1 LINE L1 -5453 943 521 184 185 37 0 chr2 4438422 4438476 -246249378 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 2239 108 3 0 chr2 4438815 4439112 -246248742 + AluSx SINE Alu 1 298 -14 465 342 129 32 chr2 4439413 4440243 -246247611 - L2 LINE L2 -653 2661 1752 286 278 35 28 chr2 4440371 4440515 -246247339 + L1MB8 LINE L1 93 237 -6622 305 301 65 75 chr2 4441002 4441188 -246246666 + L1MB8 LINE L1 1253 1436 -5511 1603 161 68 37 chr2 4441253 4441577 -246246277 + MER1B DNA MER1_type 4 337 0 1500 288 87 23 chr2 4441600 4442360 -246245494 + L1MB8 LINE L1 1380 2209 -4750 1805 167 7 10 chr2 4442360 4442660 -246245194 + AluJo SINE Alu 1 299 -13 1500 288 87 23 chr2 4442660 4442804 -246245050 + L1MB8 LINE L1 2209 2342 -4617 192 125 0 0 chr2 4442927 4442959 -246244895 + (CA)n Simple_repeat Simple_repeat 1 32 0 1497 270 80 32 chr2 4443100 4444372 -246243482 + L1MB8 LINE L1 2619 3927 -3030 * 1988 212 75 8 chr2 4444350 4444873 -246242981 + L1MB8 LINE L1 6197 6754 -235 1791 137 0 50 chr2 4444939 4445267 -246242587 - AluSq SINE Alu 0 313 1 2330 99 3 3 chr2 4446931 4447235 -246240619 + AluSp SINE Alu 1 304 -9 226 272 150 27 chr2 4447546 4447693 -246240161 + MIR SINE MIR 73 237 -25 342 247 139 38 chr2 4447977 4448135 -246239719 - MIR SINE MIR -42 220 47 1807 231 73 47 chr2 4448140 4448756 -246239098 + L1MC3 LINE L1 7153 7784 -1 2007 99 21 18 chr2 4449108 4449430 -246238424 + AluSg SINE Alu 1 323 0 857 161 61 11 chr2 4449533 4449713 -246238141 - L1MA8 LINE L1 -100 6191 6003 359 294 73 34 chr2 4450871 4451048 -246236806 - MIR SINE MIR 0 262 79 481 55 27 0 chr2 4451078 4451151 -246236703 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1268 219 91 17 chr2 4451210 4451561 -246236293 - MLT2C1 LTR ERVL -20 377 1 1653 210 3 0 chr2 4451839 4452130 -246235724 + AluJo SINE Alu 1 292 -20 306 314 0 0 chr2 4452135 4452221 -246235633 - L1MC4 LINE L1 -1343 6699 6614 204 200 0 0 chr2 4452225 4452270 -246235584 + (TA)n Simple_repeat Simple_repeat 1 45 0 1108 192 39 13 chr2 4452297 4452526 -246235328 - MER46A DNA MER2_type -1 235 1 2032 154 3 0 chr2 4452729 4453034 -246234820 + AluSq SINE Alu 1 306 -7 356 250 21 21 chr2 4453035 4453175 -246234679 - L1MC4 LINE L1 -1 8041 7902 248 245 0 0 chr2 4453176 4453229 -246234625 + (CATATA)n Simple_repeat Simple_repeat 5 57 0 239 214 0 0 chr2 4453229 4453285 -246234569 - L1MC4 LINE L1 -1339 6703 6648 472 248 18 69 chr2 4453318 4453550 -246234304 - L1MC4 LINE L1 -100 7708 7585 218 289 0 24 chr2 4455217 4455300 -246232554 + CT-rich Low_complexity Low_complexity 2 82 0 569 362 138 23 chr2 4455332 4455673 -246232181 - L2 LINE L2 -2064 1250 829 1307 137 64 0 chr2 4455673 4455892 -246231962 - L1PA11 LINE L1 -2 6172 5940 569 362 138 23 chr2 4455892 4456064 -246231790 - L2 LINE L2 -2485 829 678 1605 181 6 33 chr2 4456476 4456549 -246231305 - L1MC2 LINE L1 -16 6328 6255 2254 118 37 11 chr2 4456549 4456904 -246230950 + THE1B LTR MaLR 1 364 0 1605 181 6 33 chr2 4456904 4457162 -246230692 - L1MC2 LINE L1 -89 6255 6006 508 286 158 22 chr2 4457344 4457655 -246230199 + LTR16A LTR ERVL 93 445 -5 888 186 0 13 chr2 4458103 4458259 -246229595 - FRAM SINE Alu -17 159 6 300 191 0 44 chr2 4459649 4459785 -246228069 + (TA)n Simple_repeat Simple_repeat 2 131 0 1584 207 13 10 chr2 4462003 4462303 -246225551 + AluJb SINE Alu 1 301 -11 24 0 0 0 chr2 4462620 4462644 -246225210 + AT_rich Low_complexity Low_complexity 1 24 0 1944 152 39 17 chr2 4462671 4463027 -246224827 - THE1B LTR MaLR 0 364 1 1592 127 0 9 chr2 4463818 4464047 -246223807 - AluSg/x SINE Alu -8 302 76 888 258 24 0 chr2 4464539 4464748 -246223106 + MER20 DNA MER1_type 6 219 0 458 227 47 7 chr2 4465292 4465442 -246222412 + Charlie5 DNA MER1_type 2469 2624 0 306 0 0 0 chr2 4466074 4466108 -246221746 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 529 217 83 64 chr2 4466109 4466266 -246221588 + AluJb SINE Alu 136 295 -17 1645 121 22 0 chr2 4471025 4471256 -246216598 - AluSx SINE Alu -14 298 63 246 273 175 13 chr2 4472149 4472303 -246215551 - L1MC2 LINE L1 -2055 5753 5575 337 278 151 50 chr2 4472380 4472818 -246215036 + L1M4 LINE L1 3346 3863 -2283 2144 110 0 23 chr2 4472818 4473126 -246214728 + AluSg SINE Alu 1 301 -9 337 278 151 50 chr2 4473126 4473291 -246214563 + L1M4 LINE L1 3863 4010 -2136 224 209 0 0 chr2 4475144 4475187 -246212667 + GA-rich Low_complexity Low_complexity 1 43 0 2342 206 49 0 chr2 4475224 4475715 -246212139 - MLT2B2 LTR ERVL 0 515 1 180 125 0 0 chr2 4475939 4475971 -246211883 + (A)n Simple_repeat Simple_repeat 1 32 0 334 310 78 49 chr2 4476078 4476362 -246211492 - L1MC4a LINE L1 -1849 5959 5668 202 296 70 0 chr2 4476705 4476776 -246211078 - MIR SINE MIR -165 97 22 23 0 0 0 chr2 4477246 4477269 -246210585 + AT_rich Low_complexity Low_complexity 1 23 0 2385 96 0 0 chr2 4478427 4478729 -246209125 - AluSg SINE Alu -8 302 1 2088 150 0 0 chr2 4479835 4480135 -246207719 - AluSx SINE Alu -11 301 2 195 42 0 0 chr2 4481311 4481335 -246206519 + (T)n Simple_repeat Simple_repeat 1 24 0 336 209 77 44 chr2 4481564 4481655 -246206199 - L2 LINE L2 -20 3252 3159 227 360 12 12 chr2 4481825 4481911 -246205943 + L2 LINE L2 3227 3312 -1 206 327 72 39 chr2 4482200 4482408 -246205446 - L2 LINE L2 -1 3312 3098 488 205 60 30 chr2 4482731 4482897 -246204957 - MER58C DNA MER1_type -16 199 29 209 196 0 22 chr2 4482990 4483036 -246204818 + CT-rich Low_complexity Low_complexity 3 47 0 242 292 35 53 chr2 4483471 4483584 -246204270 + MIR SINE MIR 46 156 -106 4459 228 75 92 chr2 4484213 4487104 -246200750 + L1ME3A LINE L1 2194 5035 -1111 357 251 18 90 chr2 4487120 4487242 -246200612 + L1ME3A LINE L1 5772 5880 -290 1804 187 7 0 chr2 4487242 4487547 -246200307 + AluJb SINE Alu 1 307 -5 357 251 18 90 chr2 4487547 4487591 -246200263 + L1ME3A LINE L1 5880 5926 -244 556 228 122 6 chr2 4488216 4488396 -246199458 + MLT1J LTR MaLR 1 201 -310 244 252 205 39 chr2 4488711 4488838 -246199016 + MLT1J LTR MaLR 356 503 -8 426 307 95 35 chr2 4489464 4489780 -246198074 + LTR16C LTR ERVL 146 480 -11 27 0 0 0 chr2 4489813 4489840 -246198014 + AT_rich Low_complexity Low_complexity 1 27 0 189 309 81 24 chr2 4490192 4490315 -246197539 - MIR SINE MIR -14 248 119 2478 108 8 5 chr2 4490702 4491073 -246196781 - L1PA14 LINE L1 -3 6158 5787 283 315 72 9 chr2 4491086 4491197 -246196657 - MIR SINE MIR -60 148 31 200 208 0 38 chr2 4491365 4491418 -246196436 + CT-rich Low_complexity Low_complexity 4 54 0 221 307 94 45 chr2 4491638 4491882 -246195972 - L2 LINE L2 -354 2960 2705 192 356 87 67 chr2 4492282 4492535 -246195319 + L2 LINE L2 2953 3210 -62 306 294 61 81 chr2 4494231 4494428 -246193426 - MIR3 SINE MIR -9 199 7 28 0 0 0 chr2 4494436 4494464 -246193390 + AT_rich Low_complexity Low_complexity 1 28 0 202 283 0 0 chr2 4494614 4494674 -246193180 + (CATA)n Simple_repeat Simple_repeat 3 62 0 443 339 155 13 chr2 4494717 4495092 -246192762 - L3 LINE CR1 -112 1465 1038 351 0 0 0 chr2 4495196 4495235 -246192619 + (CA)n Simple_repeat Simple_repeat 2 40 0 182 262 107 0 chr2 4495429 4495513 -246192341 - L3 LINE CR1 -858 719 627 29 28 0 0 chr2 4495604 4495640 -246192214 + AT_rich Low_complexity Low_complexity 1 36 0 7904 94 0 0 chr2 4496153 4497246 -246190608 - L1P3 LINE L1 -4788 1673 581 6912 109 7 12 chr2 4497243 4498342 -246189512 + L1P LINE L1 1936 3029 -3117 * 2930 176 4 13 chr2 4498636 4499181 -246188673 - L1PA16 LINE L1 -10 6156 5617 2430 174 70 42 chr2 4499225 4499547 -246188307 - MLT2B3 LTR ERVL -8 546 202 207 0 0 0 chr2 4499547 4499570 -246188284 + (GA)n Simple_repeat Simple_repeat 2 24 0 2430 174 70 42 chr2 4499570 4499777 -246188077 - MLT2B3 LTR ERVL -352 202 2 3663 245 31 27 chr2 4499804 4501535 -246186319 + L1MB7 LINE L1 3997 5754 -430 559 77 26 0 chr2 4501535 4501613 -246186241 + MADE1 DNA Mariner 1 80 0 3663 245 31 27 chr2 4501613 4501946 -246185908 + L1MB7 LINE L1 5754 6084 -100 319 323 90 26 chr2 4502375 4502564 -246185290 + MIR SINE MIR 11 211 -51 419 291 99 6 chr2 4502728 4502910 -246184944 - LTR50 LTR ERVL -126 669 471 466 246 123 45 chr2 4502980 4503224 -246184630 - LTR50 LTR ERVL -532 263 1 1874 159 11 0 chr2 4503463 4503746 -246184108 + AluSx SINE Alu 1 286 -26 3914 157 24 10 chr2 4503995 4504708 -246183146 + MER50 LTR ERV1 1 723 -11 689 297 53 28 chr2 4504813 4505210 -246182644 + LTR16B LTR ERVL 37 443 -21 3384 200 67 4 chr2 4505261 4506037 -246181817 - L1MB8 LINE L1 -6 6172 5348 1403 147 0 32 chr2 4506073 4506291 -246181563 - AluSg/x SINE Alu -16 296 86 273 226 0 0 chr2 4506291 4506344 -246181510 - L1M4b LINE L1 -5898 961 909 471 218 0 10 chr2 4506353 4506454 -246181400 + Tigger2a DNA MER2_type 1 100 -334 2042 234 102 22 chr2 4506454 4507124 -246180730 - MER50 LTR ERV1 0 734 12 2105 149 6 3 chr2 4507128 4507478 -246180376 + Tigger2a DNA MER2_type 94 444 0 757 305 59 25 chr2 4507489 4507896 -246179958 - L1M4b LINE L1 -5968 891 471 444 282 169 23 chr2 4507934 4508200 -246179654 - L1M4b LINE L1 -6480 379 75 243 304 29 0 chr2 4508671 4508740 -246179114 - MIR3 SINE MIR -27 181 111 342 256 277 0 chr2 4508972 4509109 -246178745 + MER5B DNA MER1_type 1 175 -3 269 303 111 0 chr2 4509923 4510022 -246177832 - MIR SINE MIR -61 147 38 236 309 48 40 chr2 4510046 4510172 -246177682 + L2 LINE L2 3144 3270 -2 435 343 48 6 chr2 4510492 4510658 -246177196 + MER5B DNA MER1_type 6 178 0 758 154 155 2 chr2 4512653 4512876 -246174978 + L1MA9 LINE L1 6055 6312 0 2152 102 78 90 chr2 4512969 4513402 -246174452 + MSTA LTR MaLR 1 428 0 333 118 0 0 chr2 4513502 4513513 -246174341 + (TG)n Simple_repeat Simple_repeat 1 62 0 333 118 0 0 chr2 4513513 4513564 -246174290 + (TG)n Simple_repeat Simple_repeat 2 52 0 492 311 53 21 chr2 4514823 4515013 -246172841 - MIR SINE MIR -44 218 23 2576 162 80 53 chr2 4515135 4515722 -246172132 - MER6A DNA MER2_type 0 605 3 636 270 76 8 chr2 4515968 4516176 -246171678 - MIR SINE MIR -49 213 1 21 0 0 0 chr2 4516418 4516439 -246171415 + AT_rich Low_complexity Low_complexity 1 21 0 286 286 29 6 chr2 4517739 4517914 -246169940 + (TA)n Simple_repeat Simple_repeat 2 180 0 207 0 0 0 chr2 4518042 4518065 -246169789 + (A)n Simple_repeat Simple_repeat 1 23 0 2053 121 16 7 chr2 4518331 4518660 -246169194 + AluSx SINE Alu 1 312 0 328 299 142 0 chr2 4518757 4518891 -246168963 - MIR SINE MIR -5 257 105 223 200 17 17 chr2 4518916 4518976 -246168878 + T-rich Low_complexity Low_complexity 1 60 0 29 47 0 0 chr2 4519566 4519609 -246168245 + AT_rich Low_complexity Low_complexity 1 43 0 2593 40 0 0 chr2 4521392 4521689 -246166165 - AluY SINE Alu -14 297 1 351 107 40 0 chr2 4522418 4522493 -246165361 + (CA)n Simple_repeat Simple_repeat 2 79 0 213 39 0 0 chr2 4522993 4523019 -246164835 + (T)n Simple_repeat Simple_repeat 1 26 0 1165 225 40 25 chr2 4523093 4523418 -246164436 - MER93a LTR ERV1 -10 392 63 336 167 0 0 chr2 4523526 4523598 -246164256 + T-rich Low_complexity Low_complexity 1 72 0 241 466 8 0 chr2 4524210 4524328 -246163526 + L2 LINE L2 3141 3259 -13 33 25 0 0 chr2 4524721 4524761 -246163093 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 4524961 4524983 -246162871 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 4526203 4526225 -246161629 + AT_rich Low_complexity Low_complexity 1 22 0 2542 62 0 0 chr2 4526871 4527180 -246160674 - AluY SINE Alu -2 309 1 197 143 29 0 chr2 4527757 4527792 -246160062 + L2 LINE L2 3216 3251 -21 755 279 101 13 chr2 4527895 4528211 -246159643 - MLT1A1 LTR MaLR -2 363 20 317 248 8 0 chr2 4528460 4528589 -246159265 + (TG)n Simple_repeat Simple_repeat 1 130 0 180 217 0 0 chr2 4528631 4528677 -246159177 + (TG)n Simple_repeat Simple_repeat 1 46 0 25 0 0 0 chr2 4529544 4529569 -246158285 + AT_rich Low_complexity Low_complexity 1 25 0 190 360 73 40 chr2 4529613 4529763 -246158091 + MIR3 SINE MIR 22 176 -32 2729 229 30 30 chr2 4529938 4530775 -246157079 - L1MD1 LINE L1 -2 6240 5404 1187 186 11 30 chr2 4530777 4531041 -246156813 + MLT1B LTR MaLR 3 261 -129 710 109 0 10 chr2 4581043 4581144 -246106710 - AluS SINE Alu -212 101 2 514 271 65 28 chr2 4581217 4581431 -246106423 - MIR SINE MIR -1 261 40 1732 175 14 14 chr2 4581631 4581928 -246105926 - AluJb SINE Alu -15 297 1 2085 166 48 45 chr2 4583847 4584203 -246103651 + LTR18A LTR ERVL 1 357 0 2295 12 0 0 chr2 4584652 4584902 -246102952 + AluYa5 SINE Alu 62 311 0 181 125 42 28 chr2 4585150 4585222 -246102632 + (TA)n Simple_repeat Simple_repeat 1 73 0 229 165 39 10 chr2 4585266 4585369 -246102485 + (TA)n Simple_repeat Simple_repeat 2 107 0 28 0 0 0 chr2 4585444 4585472 -246102382 + AT_rich Low_complexity Low_complexity 1 28 0 222 121 0 121 chr2 4586666 4586724 -246101130 + L2 LINE L2 3222 3272 0 272 212 61 0 chr2 4586768 4586781 -246101073 + MER3 DNA MER1_type 32 48 -161 612 204 32 51 chr2 4586781 4586938 -246100916 - MER3 DNA MER1_type 0 209 56 3571 75 23 0 chr2 4588783 4589226 -246098628 - MLT2A2 LTR ERVL 0 453 1 37 76 0 0 chr2 4589373 4589452 -246098402 + AT_rich Low_complexity Low_complexity 1 79 0 190 205 26 0 chr2 4589462 4589540 -246098314 + (TA)n Simple_repeat Simple_repeat 2 81 0 34 0 0 0 chr2 4589540 4589574 -246098280 + AT_rich Low_complexity Low_complexity 1 34 0 504 171 29 6 chr2 4589613 4589788 -246098066 + (TA)n Simple_repeat Simple_repeat 1 179 0 2929 203 83 36 chr2 4591067 4591504 -246096350 - L1MB3 LINE L1 -28 6155 5740 2480 68 0 7 chr2 4591504 4591813 -246096041 + AluY SINE Alu 1 307 -4 309 51 0 0 chr2 4591815 4591854 -246096000 + (TA)n Simple_repeat Simple_repeat 1 39 0 2929 203 83 36 chr2 4591854 4592137 -246095717 - L1MB3 LINE L1 -443 5740 5398 411 336 61 40 chr2 4593814 4594052 -246093802 + L2 LINE L2 2447 2698 -616 1926 152 146 16 chr2 4594052 4594428 -246093426 + MSTA LTR MaLR 2 426 -2 411 336 61 40 chr2 4594428 4594585 -246093269 + L2 LINE L2 2698 2850 -464 284 323 108 36 chr2 4594579 4594830 -246093024 + L2 LINE L2 3045 3313 0 * 2461 56 10 0 chr2 4595566 4595872 -246091982 - AluY SINE Alu -2 309 1 312 270 0 63 chr2 4596217 4596328 -246091526 - MLT1J2 LTR MaLR -2 448 345 247 353 12 0 chr2 4596714 4596799 -246091055 + MIR3 SINE MIR 92 177 -31 832 244 0 28 chr2 4597169 4597382 -246090472 - MER58A DNA MER1_type -15 209 3 419 86 69 43 chr2 4597527 4597643 -246090211 + CT-rich Low_complexity Low_complexity 2 120 0 1012 155 0 0 chr2 4597651 4597799 -246090055 - AluSg/x SINE Alu -32 280 133 1281 188 68 12 chr2 4597799 4598106 -246089748 - L1MA8 LINE L1 -52 6239 5937 797 205 206 23 chr2 4598202 4598654 -246089200 - MLT1F1 LTR MaLR -6 561 1 1726 177 10 7 chr2 4600267 4600572 -246087282 - AluSx SINE Alu -6 306 1 1585 173 78 0 chr2 4600610 4600893 -246086961 + AluSg SINE Alu 1 305 -5 258 244 213 8 chr2 4601001 4601128 -246086726 + L2 LINE L2 3161 3313 0 331 239 0 80 chr2 4605283 4605371 -246082483 + L2 LINE L2 3224 3304 -9 1598 225 76 57 chr2 4605907 4606428 -246081426 + MLT2B3 LTR ERVL 1 487 -33 3591 178 60 33 chr2 4606653 4607417 -246080437 + LTR1 LTR ERV1 1 785 0 208 330 96 0 chr2 4607531 4607646 -246080208 - L2 LINE L2 0 3313 3188 327 336 57 0 chr2 4607949 4608089 -246079765 - MIR SINE MIR -65 197 50 369 43 0 0 chr2 4610378 4610425 -246077429 + (CA)n Simple_repeat Simple_repeat 2 48 0 605 238 119 61 chr2 4610427 4610788 -246077066 - Charlie4a DNA MER1_type -104 404 23 1177 106 29 114 chr2 4610810 4610973 -246076881 - MER30 DNA MER1_type 0 230 55 1985 155 0 16 chr2 4610973 4611290 -246076564 - AluSx SINE Alu 0 312 1 1177 106 29 114 chr2 4611290 4611351 -246076503 - MER30 DNA MER1_type -175 55 26 2788 121 0 0 chr2 4611351 4611715 -246076139 - THE1B LTR MaLR 0 364 1 1177 106 29 114 chr2 4611715 4611735 -246076119 - MER30 DNA MER1_type -204 26 6 208 289 0 33 chr2 4612027 4612117 -246075737 + (TA)n Simple_repeat Simple_repeat 2 88 0 233 268 101 67 chr2 4612318 4612527 -246075327 + L1ME LINE L1 5652 5867 -254 185 325 62 100 chr2 4614859 4615019 -246072835 + MIR3 SINE MIR 41 194 -14 24 0 0 0 chr2 4615030 4615054 -246072800 + AT_rich Low_complexity Low_complexity 1 24 0 306 351 48 30 chr2 4615251 4615416 -246072438 + L2 LINE L2 2762 2929 -385 232 292 108 46 chr2 4615633 4615805 -246072049 - MER5B DNA MER1_type -11 178 1 28 29 0 0 chr2 4618247 4618282 -246069572 + AT_rich Low_complexity Low_complexity 1 35 0 317 253 114 13 chr2 4619377 4619535 -246068319 - L1ME4a LINE L1 -157 5964 5791 212 256 268 18 chr2 4620309 4620477 -246067377 - MIR SINE MIR -39 223 14 208 237 85 0 chr2 4620808 4620867 -246066987 - L2 LINE L2 -50 3263 3200 2868 117 0 3 chr2 4622059 4622435 -246065419 - THE1C LTR MaLR 0 375 1 381 364 48 36 chr2 4623855 4624185 -246063669 + L1MEd LINE L1 530 863 -5256 524 318 53 26 chr2 4624356 4624885 -246062969 + L1MEd LINE L1 1053 1595 -4715 292 205 33 8 chr2 4624970 4625092 -246062762 + (TA)n Simple_repeat Simple_repeat 2 126 0 28 91 0 0 chr2 4625131 4625208 -246062646 + AT_rich Low_complexity Low_complexity 1 77 0 29 60 0 0 chr2 4625654 4625704 -246062150 + AT_rich Low_complexity Low_complexity 1 50 0 1002 215 27 32 chr2 4626581 4626800 -246061054 - MER20 DNA MER1_type -1 218 1 261 268 98 41 chr2 4627057 4627180 -246060674 + L2 LINE L2 3137 3266 -6 184 288 89 85 chr2 4628426 4628662 -246059192 + L2 LINE L2 3077 3313 0 2091 130 0 16 chr2 4629260 4629576 -246058278 + AluSx SINE Alu 1 311 -1 26 0 0 0 chr2 4630154 4630180 -246057674 + AT_rich Low_complexity Low_complexity 1 26 0 1187 193 121 43 chr2 4630260 4630594 -246057260 - MLT1A1 LTR MaLR -7 421 1 733 205 0 0 chr2 4630756 4630932 -246056922 - FLAM_C SINE Alu 0 176 1 1032 247 18 0 chr2 4631208 4631435 -246056419 - MLT1F1 LTR MaLR -7 560 330 252 212 47 35 chr2 4631555 4631640 -246056214 - MLT1F1 LTR MaLR -481 86 1 2240 91 14 0 chr2 4632274 4632570 -246055284 + AluSp SINE Alu 1 300 -13 387 298 13 33 chr2 4632705 4632856 -246054998 + GA-rich Low_complexity Low_complexity 1 148 0 23 33 0 0 chr2 4634426 4634456 -246053398 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr2 4634480 4634515 -246053339 + AT_rich Low_complexity Low_complexity 1 35 0 21 82 0 0 chr2 4634572 4634621 -246053233 + AT_rich Low_complexity Low_complexity 1 49 0 4060 232 113 40 chr2 4634918 4636202 -246051652 + Charlie1a DNA MER1_type 19 1396 -59 263 308 88 13 chr2 4636216 4636375 -246051479 - L2 LINE L2 -2009 1305 1135 2099 119 0 44 chr2 4637268 4637588 -246050266 - AluSx SINE Alu -6 306 1 21 36 0 0 chr2 4637860 4637888 -246049966 + AT_rich Low_complexity Low_complexity 1 28 0 333 82 0 0 chr2 4638597 4638646 -246049208 + (CA)n Simple_repeat Simple_repeat 2 50 0 216 268 42 38 chr2 4640336 4640421 -246047433 - MIR SINE MIR -68 140 53 2732 32 0 0 chr2 4640729 4641039 -246046815 - AluY SINE Alu 0 311 2 208 164 0 36 chr2 4642626 4642681 -246045173 + CT-rich Low_complexity Low_complexity 4 56 0 310 160 13 13 chr2 4642737 4642812 -246045042 + CT-rich Low_complexity Low_complexity 4 78 0 201 313 9 18 chr2 4643123 4643235 -246044619 + GA-rich Low_complexity Low_complexity 4 114 0 199 195 18 43 chr2 4643654 4643818 -246044036 + (TATAA)n Simple_repeat Simple_repeat 3 162 0 395 348 111 14 chr2 4644371 4644650 -246043204 - L3 LINE CR1 -25 1552 1247 793 164 0 0 chr2 4644651 4644767 -246043087 + FLAM_C SINE Alu 3 118 -15 452 126 11 0 chr2 4645076 4645163 -246042691 + (CA)n Simple_repeat Simple_repeat 1 88 0 249 326 41 10 chr2 4645510 4645608 -246042246 + MIR3 SINE MIR 62 162 -46 186 43 0 0 chr2 4646727 4646750 -246041104 + (GA)n Simple_repeat Simple_repeat 2 24 0 223 225 0 56 chr2 4649218 4649289 -246038565 + (TG)n Simple_repeat Simple_repeat 2 68 0 2483 74 3 10 chr2 4649460 4649769 -246038085 + AluSp SINE Alu 1 307 -6 217 259 46 46 chr2 4650552 4650660 -246037194 + MIR SINE MIR 112 219 -43 6469 96 15 14 chr2 4652286 4653652 -246034202 + L1PA12 LINE L1 4795 6168 0 1928 149 3 3 chr2 4654065 4654360 -246033494 + AluJo SINE Alu 1 295 -17 1942 91 88 0 chr2 4654511 4654785 -246033069 + AluSp SINE Alu 2 299 -14 947 253 83 41 chr2 4654845 4655138 -246032716 - MLT1E2 LTR MaLR -87 539 225 2339 163 49 5 chr2 4655138 4655548 -246032306 + MSTA LTR MaLR 1 428 0 947 253 83 41 chr2 4655548 4655641 -246032213 - MLT1E2 LTR MaLR -401 225 137 316 270 45 27 chr2 4656255 4656366 -246031488 + HAL1b LINE L1 621 733 -615 259 231 88 27 chr2 4656986 4657133 -246030721 + L1MDa LINE L1 2468 2623 -3917 2755 23 0 0 chr2 4657395 4657705 -246030149 + AluYa5 SINE Alu 1 310 -1 415 304 53 6 chr2 4658359 4658530 -246029324 - MIR SINE MIR -72 190 12 1026 262 75 75 chr2 4658533 4659422 -246028432 + MER45C DNA AcHobo 1 943 -10 390 305 0 0 chr2 4659511 4659616 -246028238 - L3 LINE CR1 -272 1305 1201 2295 118 0 0 chr2 4659857 4660170 -246027684 + AluSq SINE Alu 1 313 0 237 278 0 0 chr2 4661945 4662035 -246025819 + (TA)n Simple_repeat Simple_repeat 1 90 0 218 402 0 0 chr2 4662120 4662212 -246025642 - MIR3 SINE MIR -16 192 101 223 346 122 19 chr2 4663025 4663181 -246024673 - MIR SINE MIR -71 191 20 261 83 0 0 chr2 4663290 4663326 -246024528 + (T)n Simple_repeat Simple_repeat 1 36 0 234 62 0 0 chr2 4663810 4663842 -246024012 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 25 75 0 0 chr2 4664021 4664074 -246023780 + AT_rich Low_complexity Low_complexity 1 53 0 506 277 63 51 chr2 4664089 4664342 -246023512 + L2 LINE L2 3056 3311 -2 267 79 0 0 chr2 4664820 4664858 -246022996 + (TG)n Simple_repeat Simple_repeat 2 39 0 817 244 60 69 chr2 4666481 4666804 -246021050 - L2 LINE L2 -359 2913 2581 306 363 65 0 chr2 4667330 4667454 -246020400 - L2 LINE L2 0 3272 3141 1574 88 97 0 chr2 4668351 4668568 -246019286 + L1PA7 LINE L1 5917 6154 0 454 198 12 0 chr2 4669186 4669267 -246018587 - LTR16A1 LTR ERVL -2 455 374 330 311 83 0 chr2 4669452 4669632 -246018222 - LTR16A1 LTR ERVL -116 341 147 593 234 42 42 chr2 4670390 4670582 -246017272 + MLT1J1 LTR MaLR 18 209 -237 294 266 16 40 chr2 4670692 4670816 -246017038 - LTR33 LTR ERVL -2 519 399 670 320 32 41 chr2 4671291 4671632 -246016222 - L3 LINE CR1 -175 1402 1065 817 244 37 5 chr2 4671770 4671987 -246015867 - MER58A DNA MER1_type 0 224 1 412 212 18 44 chr2 4671998 4672111 -246015743 + MER5B DNA MER1_type 4 113 -65 946 224 103 33 chr2 4672114 4672221 -246015633 - L1MDa LINE L1 -6239 301 203 1669 171 23 10 chr2 4672221 4672526 -246015328 + AluJo SINE Alu 1 309 -3 946 224 103 33 chr2 4672526 4672690 -246015164 - L1MDa LINE L1 -6337 203 11 666 218 67 22 chr2 4673037 4673216 -246014638 + MER5A DNA MER1_type 3 189 0 487 301 0 28 chr2 4673268 4673411 -246014443 - MER5B DNA MER1_type -3 175 37 290 181 0 14 chr2 4673549 4673621 -246014233 + (TA)n Simple_repeat Simple_repeat 2 72 0 350 281 0 0 chr2 4673628 4673717 -246014137 - L1MC4 LINE L1 -1339 6703 6615 1791 198 147 2 chr2 4673728 4674143 -246013711 - MLT2B2 LTR ERVL -40 475 1 1298 79 0 6 chr2 4674605 4674783 -246013071 + L1PA5 LINE L1 5978 6154 0 259 329 61 13 chr2 4675243 4675474 -246012380 - HAL1 LINE L1 -2063 444 203 436 68 27 14 chr2 4675751 4675824 -246012030 + (GAAAA)n Simple_repeat Simple_repeat 2 75 0 282 73 0 0 chr2 4676050 4676091 -246011763 + (A)n Simple_repeat Simple_repeat 1 41 0 34 42 0 0 chr2 4676786 4676834 -246011020 + AT_rich Low_complexity Low_complexity 1 48 0 411 282 15 0 chr2 4677656 4677787 -246010067 + MER94 DNA DNA 1 133 -1 2072 137 5 67 chr2 4677898 4678285 -246009569 - THE1B LTR MaLR 0 364 2 409 98 49 16 chr2 4678635 4678758 -246009096 + (TA)n Simple_repeat Simple_repeat 1 127 0 657 64 70 18 chr2 4678772 4678943 -246008911 + (TA)n Simple_repeat Simple_repeat 1 180 0 2688 20 0 0 chr2 4680758 4681060 -246006794 - AluY SINE Alu -9 302 1 24 32 0 0 chr2 4682303 4682334 -246005520 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 4682861 4682884 -246004970 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 4686213 4686234 -246001620 + AT_rich Low_complexity Low_complexity 1 21 0 498 221 66 12 chr2 4686970 4687136 -246000718 + MER39 LTR ERV1 1 170 -372 453 206 39 58 chr2 4687117 4687272 -246000582 + MER39 LTR ERV1 357 508 -199 * 2411 72 0 0 chr2 4687315 4687607 -246000247 - AluY SINE Alu -19 292 1 306 194 0 97 chr2 4687636 4687729 -246000125 - AluJ/FLAM SINE Alu -217 85 2 1525 178 6 54 chr2 4687753 4688068 -245999786 - AluJo SINE Alu -12 300 1 257 397 7 14 chr2 4688578 4688724 -245999130 - L3 LINE CR1 -4 1573 1429 2242 188 60 34 chr2 4688727 4689263 -245998591 - MLT2B3 LTR ERVL -1 553 4 1779 159 48 7 chr2 4689278 4689568 -245998286 + AluJb SINE Alu 1 302 -10 5274 188 34 54 chr2 4689569 4690880 -245996974 - ERVL-B3 LTR ERVL -8 5756 4473 2288 170 5 2 chr2 4690856 4691257 -245996597 + ERVL LTR ERVL 4077 4478 -1286 * 1922 250 78 18 chr2 4691257 4691978 -245995876 - MLT-int LTR MaLR -59 1676 864 1381 190 23 50 chr2 4691983 4692325 -245995529 - MSTD LTR MaLR -63 333 1 266 342 102 16 chr2 4692352 4692539 -245995315 - L3 LINE CR1 -208 1369 1167 277 317 58 0 chr2 4693399 4693503 -245994351 + L2 LINE L2 3203 3312 -1 291 54 0 0 chr2 4693587 4693624 -245994230 + (TG)n Simple_repeat Simple_repeat 2 38 0 215 289 64 64 chr2 4695277 4695450 -245992404 - MIR SINE MIR 0 262 90 2297 98 0 10 chr2 4695476 4695783 -245992071 + AluSc SINE Alu 1 304 -5 1797 155 67 28 chr2 4696836 4697197 -245990657 + THE1C LTR MaLR 1 375 0 321 355 61 20 chr2 4697631 4697828 -245990026 + L1MC/D LINE L1 5540 5744 -2064 2642 42 0 0 chr2 4698594 4698905 -245988949 - AluY SINE Alu 0 311 1 521 184 64 0 chr2 4698911 4699020 -245988834 - MLT1A1 LTR MaLR -249 116 1 235 283 17 0 chr2 4699419 4699479 -245988375 - MIR SINE MIR -112 96 36 2496 67 0 0 chr2 4699663 4699962 -245987892 + AluY SINE Alu 1 299 -12 1831 156 54 0 chr2 4699994 4700328 -245987526 - THE1C LTR MaLR 0 375 24 2487 67 0 0 chr2 4700820 4701118 -245986736 + AluY SINE Alu 1 298 -13 2032 150 50 6 chr2 4701150 4701509 -245986345 - THE1C LTR MaLR 0 375 1 2671 38 0 6 chr2 4701799 4702112 -245985742 + AluY SINE Alu 1 311 0 394 298 88 23 chr2 4703310 4703481 -245984373 - L1ME3A LINE L1 -24 6146 5965 548 297 176 11 chr2 4703546 4704108 -245983746 - L1ME3A LINE L1 -211 5951 5297 554 272 92 87 chr2 4704318 4704409 -245983445 - L1ME3A LINE L1 -1310 4836 4747 2222 129 0 0 chr2 4704409 4704719 -245983135 - AluSg SINE Alu 0 310 1 554 272 92 87 chr2 4704719 4706781 -245981073 - L1ME3A LINE L1 -1399 4747 2674 334 223 16 8 chr2 4706797 4706918 -245980936 + CT-rich Low_complexity Low_complexity 3 124 0 494 274 72 33 chr2 4706943 4707333 -245980521 - L1ME3A LINE L1 -3528 2618 2214 348 211 0 0 chr2 4708036 4708112 -245979742 + (TA)n Simple_repeat Simple_repeat 1 76 0 239 79 26 0 chr2 4708111 4708149 -245979705 + (GA)n Simple_repeat Simple_repeat 2 40 0 * 1680 184 0 7 chr2 4708149 4708427 -245979427 - AluSx SINE Alu -30 282 7 28 79 0 0 chr2 4709303 4709366 -245978488 + AT_rich Low_complexity Low_complexity 1 63 0 225 0 0 0 chr2 4709570 4709595 -245978259 + (TG)n Simple_repeat Simple_repeat 1 25 0 1292 180 6 0 chr2 4710990 4711261 -245976593 - MER33 DNA MER1_type -58 266 1 536 282 44 44 chr2 4711839 4712045 -245975809 + MIR SINE MIR 41 246 -16 201 94 0 0 chr2 4712052 4712084 -245975770 + (TAG)n Simple_repeat Simple_repeat 1 32 0 228 143 0 0 chr2 4713080 4713122 -245974732 + (TC)n Simple_repeat Simple_repeat 2 43 0 2429 79 0 0 chr2 4713635 4713938 -245973916 + AluY SINE Alu 1 303 -8 252 169 102 0 chr2 4714115 4714174 -245973680 + MIR SINE MIR 87 151 -111 339 311 101 29 chr2 4714880 4715118 -245972736 + MIR SINE MIR 3 257 -5 554 352 67 15 chr2 4715679 4716082 -245971772 - L2 LINE L2 -444 2870 2447 2383 82 0 13 chr2 4717477 4717792 -245970062 - AluY SINE Alu 0 311 1 261 250 24 12 chr2 4718686 4718770 -245969084 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 843 130 15 21 chr2 4719803 4720140 -245967714 + (TG)n Simple_repeat Simple_repeat 1 334 0 1459 105 0 0 chr2 4720633 4720823 -245967031 + AluSg/x SINE Alu 110 299 -13 412 181 11 53 chr2 4724254 4724348 -245963506 + MLT1J2 LTR MaLR 361 450 0 316 260 27 0 chr2 4724424 4724574 -245963280 + (TA)n Simple_repeat Simple_repeat 2 155 0 300 237 26 0 chr2 4724679 4724852 -245963002 + (TA)n Simple_repeat Simple_repeat 1 177 0 202 429 18 39 chr2 4725380 4725475 -245962379 - L2 LINE L2 -70 3202 3106 1996 195 0 11 chr2 4725475 4725844 -245962010 - MLT1A1 LTR MaLR 0 365 1 202 429 18 39 chr2 4725844 4726028 -245961826 - L2 LINE L2 -166 3106 2929 228 35 0 0 chr2 4726925 4726954 -245960900 + (CA)n Simple_repeat Simple_repeat 2 30 0 496 304 81 20 chr2 4729509 4729824 -245958030 + L1ME LINE L1 5486 5820 -301 229 283 0 0 chr2 4730021 4730074 -245957780 + (CATA)n Simple_repeat Simple_repeat 2 54 0 351 306 99 84 chr2 4730418 4730807 -245957047 + L1ME4a LINE L1 5304 5686 -435 180 77 0 0 chr2 4730807 4730833 -245957021 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1658 180 3 28 chr2 4730836 4731125 -245956729 - AluJo SINE Alu -30 282 1 351 306 99 84 chr2 4731125 4731205 -245956649 + L1ME4a LINE L1 5687 5786 -335 332 276 163 23 chr2 4731243 4731464 -245956390 - MLT1J2 LTR MaLR -3 447 196 355 220 30 30 chr2 4732757 4732857 -245954997 + L1ME4a LINE L1 5955 6054 -67 2128 107 3 3 chr2 4733205 4733494 -245954360 + AluSx SINE Alu 3 291 -21 721 216 42 6 chr2 4733522 4733689 -245954165 + MSTD LTR MaLR 223 395 -1 384 252 172 7 chr2 4734798 4734949 -245952905 + MER117 DNA MER1_type 21 196 -1 2058 137 0 19 chr2 4735189 4735503 -245952351 - AluSx SINE Alu -4 308 1 634 339 29 4 chr2 4736480 4736754 -245951100 - L2 LINE L2 -1318 1996 1716 947 176 0 13 chr2 4739025 4739184 -245948670 + FRAM SINE Alu 1 157 -9 22 80 0 0 chr2 4741425 4741475 -245946379 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 4741504 4741526 -245946328 + AT_rich Low_complexity Low_complexity 1 22 0 1088 262 28 6 chr2 4741654 4741971 -245945883 - MER33 DNA MER1_type 0 324 1 325 299 60 22 chr2 4743803 4743937 -245943917 - MIR3 SINE MIR -59 149 11 231 347 51 10 chr2 4744064 4744210 -245943644 - MER5A DNA MER1_type -5 173 24 250 258 0 16 chr2 4744897 4744959 -245942895 - MLT1L LTR MaLR -111 504 444 430 302 58 0 chr2 4744959 4745098 -245942756 + MERVL LTR ERVL 4166 4312 -1173 1384 174 16 172 chr2 4745167 4745610 -245942244 + MLT1A2 LTR MaLR 1 374 0 256 140 0 0 chr2 4746018 4746068 -245941786 + L1MC4 LINE L1 6656 6705 -1337 257 109 22 0 chr2 4746068 4746114 -245941740 + (TA)n Simple_repeat Simple_repeat 2 48 0 2108 128 3 3 chr2 4746316 4746613 -245941241 + AluSx SINE Alu 9 305 -7 292 208 20 40 chr2 4747179 4747280 -245940574 + (TATG)n Simple_repeat Simple_repeat 2 100 0 185 156 0 22 chr2 4747295 4747340 -245940514 + (TG)n Simple_repeat Simple_repeat 1 44 0 210 71 0 0 chr2 4747511 4747539 -245940315 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 363 283 79 12 chr2 4748412 4748584 -245939270 + MIR SINE MIR 31 209 -53 185 308 66 22 chr2 4748725 4748816 -245939038 + MIR SINE MIR 70 164 -98 283 226 39 77 chr2 4749856 4750123 -245937731 + (CCCA)n Simple_repeat Simple_repeat 1 256 0 262 203 0 31 chr2 4750682 4750746 -245937108 + G-rich Low_complexity Low_complexity 4 65 0 27 0 0 0 chr2 4750836 4750863 -245936991 + AT_rich Low_complexity Low_complexity 1 27 0 683 224 12 12 chr2 4751020 4751154 -245936700 - MER5A DNA MER1_type -8 181 45 1594 222 101 9 chr2 4751154 4751582 -245936272 + MLT1C LTR MaLR 1 467 0 683 224 12 12 chr2 4751582 4751617 -245936237 - MER5A DNA MER1_type -143 46 12 1633 160 63 3 chr2 4751740 4752027 -245935827 + MER50 LTR ERV1 3 306 -428 1279 189 44 36 chr2 4752029 4752159 -245935695 + MER50 LTR ERV1 434 562 -172 2059 125 20 17 chr2 4752159 4752456 -245935398 - AluSx SINE Alu -12 300 3 1279 189 44 36 chr2 4752456 4752600 -245935254 + MER50 LTR ERV1 562 710 -24 227 287 0 69 chr2 4753013 4753100 -245934754 - MIR SINE MIR -109 99 19 2405 84 0 7 chr2 4753312 4753621 -245934233 + AluY SINE Alu 1 307 -4 219 204 20 0 chr2 4755630 4755679 -245932175 + (TA)n Simple_repeat Simple_repeat 2 51 0 309 183 54 0 chr2 4755750 4755843 -245932011 + (TA)n Simple_repeat Simple_repeat 2 99 0 197 236 36 36 chr2 4756004 4756059 -245931795 + MIR3 SINE MIR 126 180 -28 324 216 24 32 chr2 4757701 4757826 -245930028 + (TAGA)n Simple_repeat Simple_repeat 3 126 0 222 37 0 0 chr2 4758741 4758768 -245929086 + (TG)n Simple_repeat Simple_repeat 2 28 0 2439 80 3 3 chr2 4759004 4759315 -245928539 + AluY SINE Alu 1 311 0 193 215 89 51 chr2 4759422 4759501 -245928353 + MIR3 SINE MIR 106 187 -21 807 290 140 6 chr2 4759875 4760240 -245927614 + MLT1G1 LTR MaLR 86 499 -96 201 213 0 21 chr2 4760517 4760564 -245927290 + L2 LINE L2 3267 3312 -1 285 94 31 16 chr2 4761556 4761620 -245926234 + (TA)n Simple_repeat Simple_repeat 2 66 0 461 142 239 44 chr2 4761727 4761840 -245926014 + MLT1C LTR MaLR 2 136 -331 8950 182 35 9 chr2 4761841 4763247 -245924607 + L1MA3 LINE L1 21 1390 -6246 612 0 0 0 chr2 4763247 4763315 -245924539 + (GA)n Simple_repeat Simple_repeat 2 69 0 8950 182 35 9 chr2 4763315 4764727 -245923127 + L1MA3 LINE L1 1390 6893 -743 1096 203 8 38 chr2 4764730 4764996 -245922858 - AluJo SINE Alu -23 289 32 4628 119 80 10 chr2 4764996 4765772 -245922082 + L1MA3 LINE L1 6885 7714 -10 2256 99 0 7 chr2 4765804 4766108 -245921746 + AluSg1 SINE Alu 5 306 -3 1098 238 44 24 chr2 4766124 4766464 -245921390 + MLT1C LTR MaLR 121 467 0 348 320 26 48 chr2 4766486 4766717 -245921137 + MIR SINE MIR 13 238 -24 22 56 0 0 chr2 4767729 4767765 -245920089 + AT_rich Low_complexity Low_complexity 1 36 0 208 69 0 0 chr2 4769390 4769419 -245918435 - MIR SINE MIR -66 142 114 186 133 0 0 chr2 4770507 4770537 -245917317 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr2 4771401 4771429 -245916425 + AT_rich Low_complexity Low_complexity 1 28 0 2106 128 6 13 chr2 4771744 4772056 -245915798 - AluSg SINE Alu 0 310 1 464 264 22 55 chr2 4772418 4772600 -245915254 + MER69A DNA AcHobo 1 176 -1 25 0 0 0 chr2 4772801 4772826 -245915028 + AT_rich Low_complexity Low_complexity 1 25 0 2178 115 0 0 chr2 4773426 4773713 -245914141 - AluSg SINE Alu -23 287 1 1049 72 0 0 chr2 4774049 4774187 -245913667 + MLT2B1 LTR ERVL 1 138 -382 971 199 0 5 chr2 4774200 4774386 -245913468 + MLT2B2 LTR ERVL 329 513 -2 285 252 244 0 chr2 4775243 4775370 -245912484 + MIR SINE MIR 99 256 -6 263 271 14 14 chr2 4775417 4775487 -245912367 - MER5A DNA MER1_type -5 184 115 226 234 0 0 chr2 4775938 4775985 -245911869 + GA-rich Low_complexity Low_complexity 3 49 0 211 259 94 24 chr2 4775993 4776078 -245911776 + MIR SINE MIR 119 209 -53 2840 107 0 3 chr2 4776736 4777101 -245910753 + THE1B LTR MaLR 1 364 0 4240 139 26 2 chr2 4777365 4777983 -245909871 + MER41B LTR ERV1 1 633 -2 235 268 223 27 chr2 4778502 4778614 -245909240 + MER34 LTR ERV1 8 141 -401 * 237 220 121 44 chr2 4778602 4778693 -245909161 + MER34 LTR ERV1 76 173 -369 * 986 211 80 35 chr2 4778682 4778983 -245908871 + MER39 LTR ERV1 391 565 0 26 0 0 0 chr2 4779584 4779610 -245908244 + AT_rich Low_complexity Low_complexity 1 26 0 414 85 0 0 chr2 4780509 4780568 -245907286 + (GGA)n Simple_repeat Simple_repeat 2 60 0 223 221 48 10 chr2 4780986 4781090 -245906764 + (TA)n Simple_repeat Simple_repeat 1 108 0 28 29 0 0 chr2 4783900 4783935 -245903919 + AT_rich Low_complexity Low_complexity 1 35 0 1753 132 0 137 chr2 4784111 4784476 -245903378 + MER1B DNA MER1_type 25 339 0 260 228 55 41 chr2 4784510 4784655 -245903199 + (ATGTG)n Simple_repeat Simple_repeat 2 148 0 208 208 6 82 chr2 4784690 4784873 -245902981 + (TG)n Simple_repeat Simple_repeat 1 169 0 * 321 208 77 30 chr2 4784772 4784940 -245902914 + (TAGTG)n Simple_repeat Simple_repeat 5 180 0 307 238 71 18 chr2 4784966 4785134 -245902720 + (TAGTG)n Simple_repeat Simple_repeat 2 178 0 203 293 81 50 chr2 4786111 4786210 -245901644 - MIR SINE MIR -70 192 91 2294 103 3 0 chr2 4787426 4787726 -245900128 - AluSp SINE Alu -12 301 1 347 238 266 21 chr2 4787952 4788095 -245899759 - MLT1J LTR MaLR -333 178 1 5321 306 76 33 chr2 4789023 4789499 -245898355 - L2 LINE L2 -623 2691 2237 2121 106 7 0 chr2 4789499 4789781 -245898073 - AluSc SINE Alu -25 284 1 5321 306 76 33 chr2 4789781 4790738 -245897116 - L2 LINE L2 -1077 2237 1323 1420 205 13 30 chr2 4790738 4791036 -245896818 - AluJb SINE Alu -19 293 1 5321 306 76 33 chr2 4791036 4792020 -245895834 - L2 LINE L2 -1991 1323 159 2283 114 0 0 chr2 4792020 4792319 -245895535 - AluSg SINE Alu -11 299 1 5321 306 76 33 chr2 4792319 4792393 -245895461 - L2 LINE L2 -3155 159 90 33 0 0 0 chr2 4792506 4792539 -245895315 + AT_rich Low_complexity Low_complexity 1 33 0 2485 74 0 3 chr2 4792539 4792851 -245895003 - AluY SINE Alu 0 311 1 2286 121 0 3 chr2 4793117 4793431 -245894423 + AluSq SINE Alu 1 313 0 445 347 55 24 chr2 4793434 4793814 -245894040 + L1M4 LINE L1 3115 3499 -2647 668 308 242 8 chr2 4793858 4794135 -245893719 - L2 LINE L2 -561 2753 2542 2228 191 46 20 chr2 4794135 4794590 -245893264 - MLT1C LTR MaLR 0 467 1 668 308 242 8 chr2 4794590 4794832 -245893022 - L2 LINE L2 -772 2542 2112 293 381 7 0 chr2 4795128 4795267 -245892587 + L2 LINE L2 3133 3272 0 224 29 86 0 chr2 4795931 4795966 -245891888 + T-rich Low_complexity Low_complexity 4 41 0 2297 106 0 0 chr2 4796636 4796929 -245890925 + AluSx SINE Alu 5 297 -15 257 209 11 22 chr2 4796931 4797022 -245890832 + (TA)n Simple_repeat Simple_repeat 1 90 0 1973 137 0 0 chr2 4798055 4798332 -245889522 + AluSx SINE Alu 1 277 -35 220 26 26 26 chr2 4798336 4798374 -245889480 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 4800586 4800607 -245887247 + AT_rich Low_complexity Low_complexity 1 21 0 1851 152 10 3 chr2 4800607 4800896 -245886958 - AluSx SINE Alu -20 292 2 2156 108 3 13 chr2 4801363 4801670 -245886184 - AluY SINE Alu -7 304 1 603 236 99 6 chr2 4805302 4805484 -245882370 - MER3 DNA MER1_type -1 208 10 1861 137 4 0 chr2 4805775 4806045 -245881809 + AluSx SINE Alu 22 292 -20 203 333 0 0 chr2 4806079 4806139 -245881715 - L2 LINE L2 -16 3256 3197 469 228 123 49 chr2 4806148 4806310 -245881544 - MIR SINE MIR -19 243 70 1914 110 10 61 chr2 4806727 4807037 -245880817 - AluSx SINE Alu -13 299 6 278 0 0 51 chr2 4807037 4807076 -245880778 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1222 207 73 25 chr2 4807078 4807353 -245880501 - AluJb SINE Alu -24 288 1 1274 103 65 73 chr2 4807730 4807962 -245879892 + MER30 DNA MER1_type 1 230 0 2095 104 7 0 chr2 4808162 4808449 -245879405 - AluSx SINE Alu -23 289 1 207 339 28 0 chr2 4809518 4809627 -245878227 - MIR SINE MIR -56 206 95 1366 105 5 20 chr2 4809679 4809879 -245877975 + L1PA15 LINE L1 5962 6158 -7 409 136 0 0 chr2 4810812 4810878 -245876976 - Alu SINE Alu -5 306 241 3597 215 46 48 chr2 4811020 4812221 -245875633 + L1MD1 LINE L1 1147 2345 -4195 246 284 0 21 chr2 4812315 4812410 -245875444 + L1MD1 LINE L1 5493 5585 -955 849 110 0 0 chr2 4812412 4812539 -245875315 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 2020 164 0 0 chr2 4812545 4812856 -245874998 - AluSx SINE Alu -1 311 1 1822 195 88 17 chr2 4812870 4813516 -245874338 + L1MD1 LINE L1 5592 6333 -303 208 318 25 117 chr2 4813532 4813771 -245874083 + MIR SINE MIR 11 227 -35 214 338 105 48 chr2 4813797 4814380 -245873474 + L2 LINE L2 2362 2977 -337 339 25 0 0 chr2 4814780 4814820 -245873034 + (CA)n Simple_repeat Simple_repeat 2 41 0 2038 137 3 10 chr2 4814862 4815161 -245872693 - AluSx SINE Alu -15 297 1 634 263 0 0 chr2 4815339 4815491 -245872363 - L1MA10 LINE L1 -2 6332 6181 3862 176 45 32 chr2 4815508 4816203 -245871651 - MER44D DNA MER2_type 0 705 2 526 211 9 0 chr2 4816230 4816339 -245871515 - L1MB1 LINE L1 -9 6159 6050 25 0 0 0 chr2 4816372 4816397 -245871457 + AT_rich Low_complexity Low_complexity 1 25 0 243 348 121 9 chr2 4816748 4816876 -245870978 - MIR SINE MIR -61 147 13 1210 138 0 21 chr2 4817046 4817234 -245870620 - AluSx SINE Alu -128 184 1 309 327 159 22 chr2 4817238 4817608 -245870246 + L2 LINE L2 1989 2409 -905 183 42 0 0 chr2 4818381 4818405 -245869449 + (CATTC)n Simple_repeat Simple_repeat 1 24 0 249 311 0 0 chr2 4820215 4820289 -245867565 + tRNA-Ile-ATT tRNA tRNA 1 74 -3 182 247 260 0 chr2 4821120 4821193 -245866661 - MIR SINE MIR -51 211 120 23 0 0 0 chr2 4821444 4821467 -245866387 + AT_rich Low_complexity Low_complexity 1 23 0 203 122 24 24 chr2 4822237 4822278 -245865576 + A-rich Low_complexity Low_complexity 4 44 0 308 346 103 14 chr2 4822475 4822689 -245865165 + MIR SINE MIR 3 235 -27 780 187 45 90 chr2 4822708 4822976 -245864878 + MLT1A1 LTR MaLR 110 365 0 669 221 0 7 chr2 4823095 4823235 -245864619 + L1PB4 LINE L1 6018 6156 0 193 274 154 34 chr2 4823394 4823511 -245864343 + MIR3 SINE MIR 10 140 -68 575 225 62 0 chr2 4823702 4823831 -245864023 + MLT1A2 LTR MaLR 4 140 -234 2054 131 64 33 chr2 4823831 4824191 -245863663 + THE1C LTR MaLR 1 371 -4 9921 143 24 36 chr2 4824195 4825793 -245862061 + THE1C-int LTR MaLR 3 1580 0 1649 191 55 12 chr2 4825793 4826138 -245861716 + THE1C LTR MaLR 1 360 -15 810 222 54 42 chr2 4826150 4826389 -245861465 + MLT1A2 LTR MaLR 133 374 0 189 171 0 0 chr2 4827353 4827388 -245860466 + (TA)n Simple_repeat Simple_repeat 2 36 0 225 273 23 0 chr2 4827390 4827478 -245860376 - L1MC4 LINE L1 -1339 6703 6614 232 254 0 17 chr2 4827478 4827537 -245860317 + (TATG)n Simple_repeat Simple_repeat 2 59 0 243 270 0 0 chr2 4827537 4827626 -245860228 + L1MC4 LINE L1 6614 6702 -1340 231 277 153 7 chr2 4827716 4827853 -245860001 - MER103 DNA DNA -8 158 2 306 319 111 21 chr2 4827996 4828140 -245859714 - MER5A DNA MER1_type -31 158 2 211 327 29 39 chr2 4828955 4829059 -245858795 - MIR3 SINE MIR -35 173 71 352 285 69 14 chr2 4830687 4830831 -245857023 - MER5A DNA MER1_type -11 178 27 480 152 36 27 chr2 4830968 4831080 -245856774 - L1MB4 LINE L1 -1 6179 6067 2154 104 30 0 chr2 4831132 4831430 -245856424 - AluSg1 SINE Alu -2 307 1 2411 211 20 10 chr2 4831430 4831933 -245855921 - L1MB4 LINE L1 -106 6074 5567 299 318 8 8 chr2 4832561 4832693 -245855161 + (TGG)n Simple_repeat Simple_repeat 3 134 0 263 226 78 35 chr2 4833204 4833319 -245854535 + Charlie8 DNA MER1_type 73 192 -2225 372 315 6 22 chr2 4833737 4833918 -245853936 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 * 442 307 11 6 chr2 4833796 4833975 -245853879 + (CCA)n Simple_repeat Simple_repeat 1 180 0 268 346 13 0 chr2 4833937 4834093 -245853761 + (CACCAT)n Simple_repeat Simple_repeat 1 158 0 * 223 250 56 28 chr2 4834695 4834767 -245853087 + L2 LINE L2 3147 3220 -52 2494 59 0 0 chr2 4835682 4835985 -245851869 - AluY SINE Alu -8 303 1 211 189 0 0 chr2 4837387 4837424 -245850430 + (TG)n Simple_repeat Simple_repeat 2 38 0 2241 104 16 0 chr2 4837462 4837769 -245850085 - AluSq SINE Alu -1 312 1 2153 139 47 36 chr2 4838393 4838753 -245849101 - THE1B LTR MaLR 0 364 1 11988 106 13 8 chr2 4838753 4840325 -245847529 - THE1B-int LTR MaLR 0 1580 1 2207 126 47 49 chr2 4840325 4840690 -245847164 - THE1B LTR MaLR 0 364 1 212 253 13 0 chr2 4842300 4842375 -245845479 + (TA)n Simple_repeat Simple_repeat 1 76 0 2218 118 7 10 chr2 4842394 4842698 -245845156 - AluSx SINE Alu -9 303 1 22 0 0 0 chr2 4842949 4842971 -245844883 + AT_rich Low_complexity Low_complexity 1 22 0 403 171 19 0 chr2 4843763 4843868 -245843986 + (TG)n Simple_repeat Simple_repeat 2 108 0 218 205 53 41 chr2 4843923 4844094 -245843760 + (TG)n Simple_repeat Simple_repeat 1 173 0 289 117 33 0 chr2 4844138 4844198 -245843656 + (TG)n Simple_repeat Simple_repeat 2 63 0 309 266 182 13 chr2 4844781 4844935 -245842919 + L1ME3A LINE L1 5986 6165 -5 339 285 128 75 chr2 4845000 4845281 -245842573 + L1MB2 LINE L1 969 1264 -5585 180 341 71 0 chr2 4846005 4846090 -245841764 + L2 LINE L2 2710 2800 -514 228 214 0 0 chr2 4846104 4846160 -245841694 + (ATG)n Simple_repeat Simple_repeat 1 56 0 1915 158 0 0 chr2 4846215 4846506 -245841348 + AluSx SINE Alu 21 311 -1 357 223 204 32 chr2 4846510 4846667 -245841187 - MIR SINE MIR -63 199 16 202 304 152 27 chr2 4847068 4847180 -245840674 + L2 LINE L2 3187 3312 -1 2143 106 3 0 chr2 4850797 4851090 -245836764 + AluY SINE Alu 2 295 -16 760 245 70 84 chr2 4852288 4852697 -245835157 + MLT1I LTR MaLR 8 450 0 1814 138 7 24 chr2 4853888 4854225 -245833629 + AluSx SINE Alu 1 332 0 384 304 57 6 chr2 4854334 4854492 -245833362 - MIR SINE MIR -73 189 24 2199 104 0 36 chr2 4854672 4854980 -245832874 - AluSg SINE Alu -13 297 1 1427 237 113 7 chr2 4855021 4855456 -245832398 - L1ME2 LINE L1 -77 6087 5607 246 239 70 0 chr2 4855753 4855824 -245832030 - L1ME2 LINE L1 -673 5491 5416 1680 243 79 58 chr2 4855903 4856160 -245831694 - L1ME2 LINE L1 -742 5442 5192 2003 111 37 17 chr2 4856160 4856458 -245831396 - AluSx SINE Alu -8 304 1 1680 243 79 58 chr2 4856458 4857282 -245830572 - L1ME2 LINE L1 -992 5192 4321 11128 226 50 14 chr2 4857282 4857804 -245830050 + L1MB2 LINE L1 2557 3059 -3814 2204 120 0 0 chr2 4857804 4858103 -245829751 + AluSq SINE Alu 1 299 -14 11128 226 50 14 chr2 4858103 4860389 -245827465 + L1MB2 LINE L1 3059 5571 -1302 195 100 0 0 chr2 4860389 4860419 -245827435 + (CAGA)n Simple_repeat Simple_repeat 4 33 0 11128 226 50 14 chr2 4860419 4861500 -245826354 + L1MB2 LINE L1 5571 6612 -261 2536 254 80 38 chr2 4861503 4862114 -245825740 - L1ME2 LINE L1 -2413 3733 3149 181 0 33 33 chr2 4862114 4862144 -245825710 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2536 254 80 38 chr2 4862144 4862813 -245825041 - L1ME2 LINE L1 -2997 3149 2399 21 57 0 0 chr2 4863218 4863253 -245824601 + AT_rich Low_complexity Low_complexity 1 35 0 326 307 145 22 chr2 4863511 4863690 -245824164 + MIR3 SINE MIR 8 208 0 284 303 25 0 chr2 4863922 4864041 -245823813 - L1ME LINE L1 -304 5817 5696 2499 71 0 3 chr2 4864509 4864817 -245823037 + AluY SINE Alu 1 307 -4 502 275 67 42 chr2 4865358 4865598 -245822256 + MIR SINE MIR 4 249 -13 3480 187 108 28 chr2 4866175 4867300 -245820554 + L1MB7 LINE L1 4883 6103 -81 933 271 13 4 chr2 4867582 4867807 -245820047 + Charlie1 DNA MER1_type 1 227 -2534 636 234 0 0 chr2 4867801 4867942 -245819912 + Charlie1 DNA MER1_type 2620 2760 -1 * 198 300 0 71 chr2 4868165 4868235 -245819619 - L2 LINE L2 -55 3217 3153 187 372 44 22 chr2 4868446 4868583 -245819271 + L2 LINE L2 3132 3271 -1 462 153 0 90 chr2 4871251 4871362 -245816492 - MER53 DNA DNA 0 189 89 393 276 17 26 chr2 4872254 4872370 -245815484 + MIR SINE MIR 33 147 -61 21 57 0 0 chr2 4873777 4873812 -245814042 + AT_rich Low_complexity Low_complexity 1 35 0 258 105 0 0 chr2 4874821 4874859 -245812995 + (CA)n Simple_repeat Simple_repeat 1 38 0 243 0 0 0 chr2 4875702 4875729 -245812125 + (TG)n Simple_repeat Simple_repeat 1 27 0 245 281 37 49 chr2 4876924 4877006 -245810848 - MLT1K LTR MaLR -356 232 152 318 296 134 23 chr2 4877776 4877948 -245809906 - MIR SINE MIR -43 219 29 247 250 94 42 chr2 4878771 4878867 -245808987 - MIR SINE MIR -114 148 48 909 286 129 11 chr2 4878916 4879287 -245808567 + LTR16C LTR ERVL 69 483 -8 255 282 13 0 chr2 4879709 4879787 -245808067 - MER116 DNA Mariner 0 80 2 386 302 41 24 chr2 4879903 4880072 -245807782 + MIR SINE MIR 76 247 -15 195 356 82 22 chr2 4880557 4880592 -245807262 + MIR SINE MIR 49 80 -182 7009 152 43 13 chr2 4880592 4880840 -245807014 - Tigger3b DNA MER2_type -1797 1231 992 2031 134 0 0 chr2 4880840 4881297 -245806557 + AluSq SINE Alu 1 457 0 7009 152 43 13 chr2 4881297 4882243 -245805611 - Tigger3b DNA MER2_type -2036 992 1 195 356 82 22 chr2 4882243 4882342 -245805512 + MIR SINE MIR 80 191 -71 285 371 68 34 chr2 4882777 4883098 -245804756 + L2 LINE L2 2311 2642 -672 417 326 27 27 chr2 4883099 4883286 -245804568 - LTR16C LTR ERVL 0 491 305 1936 189 47 14 chr2 4883525 4883885 -245803969 - MSTD LTR MaLR 0 396 25 600 128 262 28 chr2 4884235 4884376 -245803478 - MER3 DNA MER1_type -6 203 30 479 279 38 25 chr2 4884422 4884580 -245803274 + MLT1H LTR MaLR 10 169 -380 485 274 0 16 chr2 4885493 4885617 -245802237 - MSTD LTR MaLR -78 318 197 217 239 0 0 chr2 4885691 4885737 -245802117 + MIR SINE MIR 89 134 -128 308 43 0 43 chr2 4886449 4886496 -245801358 + (TAA)n Simple_repeat Simple_repeat 2 46 0 429 293 99 42 chr2 4886912 4887103 -245800751 + MIR3 SINE MIR 1 202 -6 382 281 44 0 chr2 4887499 4887634 -245800220 - MIR3 SINE MIR -1 207 67 238 279 0 47 chr2 4888067 4888153 -245799701 + GA-rich Low_complexity Low_complexity 5 86 0 2384 64 0 0 chr2 4889239 4889581 -245798273 + AluY SINE Alu 1 342 0 256 272 87 11 chr2 4889724 4889816 -245798038 + MIR SINE MIR 91 189 -73 23 0 0 0 chr2 4890925 4890948 -245796906 + AT_rich Low_complexity Low_complexity 1 23 0 371 330 44 53 chr2 4891052 4891394 -245796460 - L2 LINE L2 -801 2513 2175 1337 219 34 70 chr2 4891512 4891811 -245796043 - MLT1A2 LTR MaLR 0 374 91 2123 182 79 89 chr2 4891811 4892371 -245795483 - MLT2B3 LTR ERVL 0 554 1 1337 219 34 70 chr2 4892371 4892459 -245795395 - MLT1A2 LTR MaLR -283 91 1 1699 219 102 2 chr2 4892965 4893385 -245794469 + MLT1C LTR MaLR 1 462 -5 1553 212 0 7 chr2 4893916 4894208 -245793646 - AluJb SINE Alu -22 290 1 531 218 69 75 chr2 4894386 4894429 -245793425 - MIR SINE MIR -8 254 212 264 77 0 0 chr2 4894429 4894468 -245793386 + (CA)n Simple_repeat Simple_repeat 2 40 0 531 218 69 75 chr2 4894468 4894526 -245793328 - MIR SINE MIR -50 212 155 2849 109 3 3 chr2 4894526 4894901 -245792953 + THE1C LTR MaLR 1 375 0 531 218 69 75 chr2 4894901 4894986 -245792868 - MIR SINE MIR -107 155 68 214 319 90 54 chr2 4895045 4895211 -245792643 - L2 LINE L2 -919 2395 2224 635 318 60 22 chr2 4895438 4896275 -245791579 + L1ME3 LINE L1 5036 5932 -230 2198 213 33 27 chr2 4896675 4896712 -245791142 - MLT2B1 LTR ERVL 0 520 485 243 0 0 0 chr2 4896712 4896739 -245791115 + (TG)n Simple_repeat Simple_repeat 2 28 0 2198 213 33 27 chr2 4896739 4897218 -245790636 - MLT2B1 LTR ERVL -35 485 1 356 290 0 0 chr2 4897702 4897802 -245790052 - MER91B DNA MER1_type -40 150 51 27 0 0 0 chr2 4899718 4899745 -245788109 + AT_rich Low_complexity Low_complexity 1 27 0 761 243 0 7 chr2 4900131 4900279 -245787575 + FRAM SINE Alu 4 150 -26 2407 82 0 13 chr2 4900281 4900585 -245787269 - AluSc SINE Alu -9 300 1 39 38 0 0 chr2 4900585 4900638 -245787216 + AT_rich Low_complexity Low_complexity 1 53 0 458 277 3 2 chr2 4902049 4902172 -245785682 - MLT1E2 LTR MaLR -202 424 262 894 289 53 73 chr2 4902221 4902594 -245785260 + HAL1 LINE L1 1054 1406 -1101 2277 111 0 16 chr2 4902594 4902909 -245784945 + AluSg SINE Alu 1 310 0 894 289 53 73 chr2 4902909 4903301 -245784553 + HAL1 LINE L1 1406 1804 -703 480 151 2 8 chr2 4904128 4904216 -245783638 + L1PB1 LINE L1 5698 5782 -369 419 147 39 0 chr2 4904235 4904337 -245783517 + (TA)n Simple_repeat Simple_repeat 1 106 0 2981 65 3 13 chr2 4904337 4904709 -245783145 + L1PB1 LINE L1 5782 6149 -2 2097 116 0 3 chr2 4905083 4905401 -245782453 - AluSq SINE Alu 0 317 1 2330 70 3 7 chr2 4905659 4905958 -245781896 + AluY SINE Alu 1 298 -13 2179 128 3 0 chr2 4956082 4956386 -245731468 + AluSx SINE Alu 1 305 -7 403 349 17 6 chr2 4956528 4956700 -245731154 + L2 LINE L2 2606 2779 -535 1932 135 0 0 chr2 4956757 4957024 -245730830 - AluSx SINE Alu -45 267 1 185 349 0 12 chr2 4958095 4958178 -245729676 - MIR SINE MIR -44 218 137 287 279 146 24 chr2 4958302 4958467 -245729387 + L1ME LINE L1 5420 5604 -560 2011 133 13 3 chr2 4958979 4959280 -245728574 - AluSp SINE Alu -5 308 5 995 209 33 113 chr2 4959564 4959961 -245727893 - MLT1A1 LTR MaLR 0 365 1 220 298 0 0 chr2 4959980 4960037 -245727817 - L3 LINE CR1 -1 1576 1520 289 330 30 88 chr2 4960166 4960463 -245727391 - L2 LINE L2 0 3272 2993 401 294 44 7 chr2 4960674 4960810 -245727044 + MIR3 SINE MIR 6 146 -62 412 264 65 75 chr2 4961490 4961691 -245726163 - MIR SINE MIR -34 228 30 360 43 0 0 chr2 4962330 4962376 -245725478 + (CA)n Simple_repeat Simple_repeat 1 46 0 354 287 25 0 chr2 4962407 4962529 -245725325 + MER112 DNA MER1_type 136 260 0 260 146 39 59 chr2 4962763 4963157 -245724697 + (TA)n Simple_repeat Simple_repeat 1 386 0 440 293 67 34 chr2 4963247 4963455 -245724399 + L2 LINE L2 3099 3313 0 184 50 100 0 chr2 4964601 4964641 -245723213 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 347 226 89 24 chr2 4965363 4965531 -245722323 - Looper DNA T2_type -10 1548 1370 * 557 264 6 0 chr2 4965524 4965687 -245722167 - Looper DNA T2_type -598 960 797 521 255 50 0 chr2 4965759 4965920 -245721934 - MER3 DNA MER1_type -20 189 21 550 195 8 0 chr2 4965930 4966048 -245721806 - L1MB1 LINE L1 -340 5828 5710 1762 138 138 9 chr2 4966089 4966438 -245721416 + MSTA LTR MaLR 2 395 -33 1929 161 0 25 chr2 4966440 4966756 -245721098 - AluJo SINE Alu -4 308 1 556 143 10 0 chr2 4966773 4966871 -245720983 - L1MA7 LINE L1 -304 5987 5889 855 299 92 9 chr2 4966880 4967208 -245720646 + LTR40a LTR ERVL 164 518 -1 1499 214 70 34 chr2 4967218 4967717 -245720137 - Looper DNA T2_type -989 569 53 1031 228 14 0 chr2 4968550 4968761 -245719093 - MER58A DNA MER1_type -9 215 2 2403 201 8 10 chr2 4969976 4970499 -245717355 - L1MB7 LINE L1 0 6184 5663 266 286 162 12 chr2 4970739 4970885 -245716969 + MIR SINE MIR 12 176 -86 479 222 43 43 chr2 4971412 4971574 -245716280 - MER20 DNA MER1_type -53 166 5 1264 291 106 39 chr2 4971588 4972614 -245715240 - L1MEc LINE L1 -4342 2054 921 3680 105 2 0 chr2 4972614 4973127 -245714727 - MER75 DNA T2_type 0 514 1 1264 291 106 39 chr2 4973127 4973404 -245714450 - L1MEc LINE L1 -5475 921 664 201 337 20 31 chr2 4973459 4973557 -245714297 - MER5B DNA MER1_type -77 101 5 1906 150 7 7 chr2 4973622 4973916 -245713938 + AluSx SINE Alu 1 294 -18 226 204 0 0 chr2 4974312 4974356 -245713498 - MER58 DNA MER1_type 0 2420 2377 326 297 64 18 chr2 4974356 4974575 -245713279 - L1MEc LINE L1 -6117 279 51 2003 167 6 6 chr2 4975375 4975711 -245712143 - MER1B DNA MER1_type -1 336 1 210 327 139 0 chr2 4975766 4975867 -245711987 - L2 LINE L2 -8 3264 3150 273 282 13 0 chr2 4976290 4976368 -245711486 + L2 LINE L2 3193 3271 -1 210 71 0 0 chr2 4977005 4977033 -245710821 + (T)n Simple_repeat Simple_repeat 1 28 0 695 255 145 33 chr2 4977808 4978263 -245709591 - HAL1 LINE L1 -125 2382 1877 578 240 125 72 chr2 4978316 4978620 -245709234 - HAL1 LINE L1 -714 1793 1474 1417 241 27 22 chr2 4979829 4980198 -245707656 + MLT1A2 LTR MaLR 1 371 -3 198 0 0 0 chr2 4981542 4981564 -245706290 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 996 233 72 43 chr2 4982261 4982609 -245705245 - MLT1C LTR MaLR -104 363 6 2337 104 0 7 chr2 4982663 4982972 -245704882 + AluSq SINE Alu 1 307 -6 871 270 131 18 chr2 4984019 4984522 -245703332 + L1ME4a LINE L1 5557 6116 -5 1864 151 0 7 chr2 4985173 4985458 -245702396 + AluSx SINE Alu 21 303 -9 22 35 0 0 chr2 4985523 4985552 -245702302 + AT_rich Low_complexity Low_complexity 1 29 0 1565 109 60 0 chr2 4985901 4986168 -245701686 + AluSc SINE Alu 1 283 -26 306 381 23 11 chr2 4987828 4988004 -245699850 + MIR3 SINE MIR 12 189 -19 275 271 42 25 chr2 4989624 4989742 -245698112 + MIR SINE MIR 96 215 -47 780 243 132 70 chr2 4990649 4991036 -245696818 - MLT2D LTR ERVL -2 412 2 1630 179 0 25 chr2 4991081 4991366 -245696488 + AluJo SINE Alu 35 312 0 447 297 92 41 chr2 4991815 4991957 -245695897 - MIR SINE MIR -23 239 83 2150 160 78 10 chr2 4991957 4992357 -245695497 - MSTA LTR MaLR 0 428 2 447 297 92 41 chr2 4992357 4992409 -245695445 - MIR SINE MIR -179 83 35 285 314 121 24 chr2 4992794 4993001 -245694853 + MLT1K LTR MaLR 326 552 -36 205 148 19 19 chr2 4993539 4993593 -245694261 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 255 40 40 20 chr2 4994269 4994319 -245693535 + (TA)n Simple_repeat Simple_repeat 2 52 0 1603 160 8 8 chr2 4995115 4995378 -245692476 + AluSx SINE Alu 48 310 -2 278 93 56 37 chr2 4995965 4996073 -245691781 + (TA)n Simple_repeat Simple_repeat 2 111 0 2162 148 0 0 chr2 4996734 4997039 -245690815 - AluSx SINE Alu -7 305 1 1833 133 35 0 chr2 4997232 4997538 -245690316 - AluSx SINE Alu 0 333 19 442 320 131 10 chr2 4998315 4998712 -245689142 - L2 LINE L2 -17 3296 2852 207 369 46 31 chr2 4998957 4999087 -245688767 - L2 LINE L2 0 3272 3141 2127 185 49 21 chr2 4999357 4999785 -245688069 + MLT1C LTR MaLR 28 467 0 283 314 163 33 chr2 5000851 5001182 -245686672 - MLT1I LTR MaLR -35 374 1 2288 108 3 3 chr2 5001239 5001546 -245686308 + AluSp SINE Alu 1 307 -6 193 313 50 0 chr2 5002496 5002576 -245685278 + MIR SINE MIR 46 129 -133 370 240 164 27 chr2 5002785 5002931 -245684923 + L1MC5 LINE L1 7746 7911 -50 235 330 139 0 chr2 5003428 5003543 -245684311 - MIR3 SINE MIR -63 145 15 285 316 0 21 chr2 5004100 5004195 -245683659 + L2 LINE L2 3175 3267 -5 279 161 0 0 chr2 5004351 5004407 -245683447 + (TG)n Simple_repeat Simple_repeat 1 56 0 609 263 60 23 chr2 5004517 5004734 -245683120 + MIR SINE MIR 13 237 -25 1592 157 39 14 chr2 5004822 5005102 -245682752 - AluJb SINE Alu -25 287 1 250 311 41 8 chr2 5006493 5006615 -245681239 - L1ME4a LINE L1 -6 6115 5990 1071 93 17 29 chr2 5006682 5006854 -245681000 - L1PA13 LINE L1 -1 6162 5993 786 256 40 4 chr2 5006892 5007119 -245680735 - MIR SINE MIR -21 241 7 23 33 0 0 chr2 5007523 5007553 -245680301 + AT_rich Low_complexity Low_complexity 1 30 0 279 287 172 0 chr2 5007658 5007780 -245680074 - L1MC4 LINE L1 -375 7667 7525 251 204 37 0 chr2 5008616 5008670 -245679184 - MIR SINE MIR -192 70 15 821 173 84 35 chr2 5010617 5010843 -245677011 + L1MB7 LINE L1 5947 6183 -1 2114 119 3 22 chr2 5010982 5011301 -245676553 - AluSp SINE Alu 0 313 1 7102 53 6 11 chr2 5012339 5013769 -245674085 + L1PA7 LINE L1 4727 6151 -3 2002 208 57 5 chr2 5013782 5014224 -245673630 + MLT1C LTR MaLR 3 467 0 244 48 48 0 chr2 5015433 5015475 -245672379 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 288 53 0 0 chr2 5015826 5015864 -245671990 + (TG)n Simple_repeat Simple_repeat 2 39 0 2020 140 10 13 chr2 5018132 5018439 -245669415 - AluSx SINE Alu -6 306 1 379 259 54 22 chr2 5020602 5020787 -245667067 + LTR16B LTR ERVL 187 377 -87 201 178 0 0 chr2 5023066 5023111 -245664743 - MER5A DNA MER1_type -22 167 123 1000 36 15 15 chr2 5023394 5023531 -245664323 + (GAAA)n Simple_repeat Simple_repeat 2 138 0 2849 13 0 0 chr2 5024244 5024552 -245663302 - AluYa5 SINE Alu -3 308 1 208 199 122 5 chr2 5025013 5025081 -245662773 + MIR SINE MIR 49 123 -85 2185 289 77 36 chr2 5026614 5027817 -245660037 + L2 LINE L2 1157 2408 -906 431 324 78 15 chr2 5028275 5028735 -245659119 + L2 LINE L2 2820 3308 -5 360 349 94 5 chr2 5029726 5029918 -245657936 + MIR SINE MIR 2 210 -52 241 301 211 36 chr2 5030098 5030377 -245657477 - L2 LINE L2 0 3272 2945 1936 178 108 11 chr2 5030428 5030861 -245656993 - L1MB3 LINE L1 -1 6182 5708 515 286 19 7 chr2 5030870 5031024 -245656830 + L2 LINE L2 3153 3308 -5 257 300 42 50 chr2 5031042 5031162 -245656692 - MIR SINE MIR -73 189 71 226 298 7 80 chr2 5031206 5031357 -245656497 + MIR SINE MIR 15 154 -108 213 289 24 12 chr2 5031558 5031641 -245656213 + MIR SINE MIR 62 145 -63 4447 152 26 1 chr2 5032359 5033076 -245654778 - L1PB4 LINE L1 -8 6148 5414 426 293 112 21 chr2 5034542 5034730 -245653124 - MIR SINE MIR -30 232 28 205 250 0 0 chr2 5034837 5034881 -245652973 - L2 LINE L2 -556 2758 2715 221 186 17 68 chr2 5035563 5035622 -245652232 - L2 LINE L2 -14 3258 3203 296 286 105 9 chr2 5035740 5035845 -245652009 + MIR SINE MIR 34 148 -114 210 284 82 75 chr2 5037682 5037816 -245650038 + MIR SINE MIR 48 182 -80 555 281 44 78 chr2 5037877 5038025 -245649829 - L2 LINE L2 -4 3309 3157 2078 115 14 0 chr2 5038025 5038311 -245649543 - AluSq SINE Alu -18 295 6 555 281 44 78 chr2 5038311 5038482 -245649372 - L2 LINE L2 -156 3157 3001 327 263 182 0 chr2 5039976 5040075 -245647779 + L2 LINE L2 3142 3258 -14 21 36 0 0 chr2 5040559 5040587 -245647267 + AT_rich Low_complexity Low_complexity 1 28 0 383 293 84 22 chr2 5040682 5040843 -245647011 + MIR3 SINE MIR 20 193 -15 1741 172 10 3 chr2 5041505 5041808 -245646046 - AluJb SINE Alu -5 307 3 2751 23 3 0 chr2 5041936 5042245 -245645609 - AluYa5 SINE Alu -1 310 1 1869 233 40 12 chr2 5042742 5043245 -245644609 + MER97a DNA MER1_type? 369 885 -9 238 299 122 20 chr2 5043569 5043716 -245644138 + MIR SINE MIR 74 235 -27 269 100 20 0 chr2 5043823 5043873 -245643981 + (TC)n Simple_repeat Simple_repeat 1 51 0 211 319 0 0 chr2 5043881 5043950 -245643904 + (CATA)n Simple_repeat Simple_repeat 3 71 0 261 153 82 0 chr2 5045008 5045064 -245642790 - MLT2B3 LTR ERVL 0 554 394 209 184 0 0 chr2 5045064 5045102 -245642752 + (CAGA)n Simple_repeat Simple_repeat 4 41 0 736 144 17 22 chr2 5045102 5045282 -245642572 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 2473 153 113 17 chr2 5045318 5045789 -245642065 - MLT2B3 LTR ERVL -38 516 1 299 272 72 32 chr2 5048526 5048651 -245639203 - L2 LINE L2 -1 3271 3142 341 327 48 48 chr2 5049919 5050170 -245637684 - L3 LINE CR1 -72 1505 1255 243 313 90 8 chr2 5050605 5050739 -245637115 - MIR SINE MIR -8 254 110 638 227 39 0 chr2 5052745 5052899 -245634955 + L1MD1 LINE L1 6083 6242 0 25 0 0 0 chr2 5053996 5054021 -245633833 + AT_rich Low_complexity Low_complexity 1 25 0 218 167 24 0 chr2 5054076 5054118 -245633736 - MIR SINE MIR -112 150 108 201 238 129 20 chr2 5054322 5054423 -245633431 - MIR SINE MIR -77 131 20 304 323 21 21 chr2 5054488 5054584 -245633270 + MIR SINE MIR 21 116 -92 24 0 0 0 chr2 5054768 5054792 -245633062 + AT_rich Low_complexity Low_complexity 1 24 0 3445 158 10 22 chr2 5054817 5054984 -245632870 - L1MA5 LINE L1 0 6300 6132 949 175 0 19 chr2 5054984 5055144 -245632710 + FRAM SINE Alu 1 157 -9 3445 158 10 22 chr2 5055144 5055601 -245632253 - L1MA5 LINE L1 -168 6132 5684 2338 197 3 37 chr2 5055601 5056146 -245631708 + L1MA5 LINE L1 5159 5664 -636 606 240 67 0 chr2 5056179 5056329 -245631525 - MER5A DNA MER1_type -29 160 1 384 88 0 0 chr2 5057364 5057421 -245630433 + (CA)n Simple_repeat Simple_repeat 1 57 0 352 284 0 0 chr2 5058486 5058567 -245629287 - L2 LINE L2 0 3313 3233 264 322 96 9 chr2 5058849 5058964 -245628890 + MIR SINE MIR 20 144 -118 313 287 111 28 chr2 5059200 5059416 -245628438 - HsTC2 DNA Tc2 -1020 878 645 2373 87 7 0 chr2 5059583 5059881 -245627973 + AluSc SINE Alu 2 301 -8 21 36 0 0 chr2 5060002 5060030 -245627824 + AT_rich Low_complexity Low_complexity 1 28 0 213 235 0 29 chr2 5060617 5060685 -245627169 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 242 293 49 0 chr2 5060965 5061047 -245626807 - HsTC2 DNA Tc2 -1329 569 484 * 264 247 13 13 chr2 5061040 5061117 -245626737 - HsTC2 DNA Tc2 -1597 301 225 1976 50 138 4 chr2 5061117 5061377 -245626477 - AluY SINE Alu -6 295 1 22 0 0 0 chr2 5062273 5062295 -245625559 + AT_rich Low_complexity Low_complexity 1 22 0 5015 181 17 13 chr2 5062304 5062684 -245625170 + Tigger3b DNA MER2_type 1 378 -2650 1916 117 50 7 chr2 5062684 5062991 -245624863 - AluSx SINE Alu 0 312 1 5015 181 17 13 chr2 5062991 5063678 -245624176 + Tigger3b DNA MER2_type 378 1231 0 1770 257 82 12 chr2 5063971 5064579 -245623275 - L1MD3 LINE L1 -2 7980 7150 1576 186 133 9 chr2 5064626 5064971 -245622883 - MLT1B LTR MaLR 0 390 3 201 171 24 0 chr2 5065869 5065910 -245621944 + (TG)n Simple_repeat Simple_repeat 2 43 0 311 279 91 61 chr2 5066418 5066615 -245621239 - L2 LINE L2 -4 3309 3107 785 225 108 95 chr2 5067108 5067451 -245620403 - MLT1H LTR MaLR -5 544 148 2082 116 0 26 chr2 5067451 5067753 -245620101 + AluSc SINE Alu 1 294 -15 785 225 108 95 chr2 5067753 5067889 -245619965 - MLT1H LTR MaLR -401 148 15 552 246 75 73 chr2 5068468 5068879 -245618975 + L1MEd LINE L1 823 1234 -4885 310 333 91 29 chr2 5068892 5069135 -245618719 + L1MEd LINE L1 1233 1490 -4639 2161 144 33 33 chr2 5069276 5069638 -245618216 - THE1B LTR MaLR 0 364 3 302 293 78 42 chr2 5071081 5071248 -245616606 + MIR SINE MIR 71 243 -19 285 294 37 37 chr2 5071282 5071391 -245616463 + L3 LINE CR1 1378 1486 -91 186 313 0 0 chr2 5071394 5071442 -245616412 + L2 LINE L2 3212 3259 -13 239 203 31 16 chr2 5071754 5071818 -245616036 - Charlie8 DNA MER1_type -2221 196 132 279 323 39 47 chr2 5072800 5072927 -245614927 + MIR SINE MIR 18 143 -119 341 172 0 0 chr2 5073553 5073611 -245614243 - L1PA16 LINE L1 -200 5966 5909 22 0 0 0 chr2 5074605 5074627 -245613227 + AT_rich Low_complexity Low_complexity 1 22 0 1494 162 4 4 chr2 5074641 5074870 -245612984 - AluSx SINE Alu -31 281 53 401 279 55 64 chr2 5075235 5075454 -245612400 - L2 LINE L2 -5 3308 3092 4683 109 8 5 chr2 5075753 5076392 -245611462 - L1PA10 LINE L1 -11 6157 5517 221 408 17 11 chr2 5076854 5077033 -245610821 + MIR SINE MIR 27 206 -56 212 348 0 0 chr2 5077150 5077219 -245610635 + L2 LINE L2 3204 3272 0 949 234 161 57 chr2 5077704 5078370 -245609484 - HAL1 LINE L1 -83 2424 1690 1039 258 119 34 chr2 5078460 5078729 -245609125 - HAL1 LINE L1 -647 1860 1537 2019 129 7 13 chr2 5078729 5079088 -245608766 + AluSx SINE Alu 1 312 0 1039 258 119 34 chr2 5079088 5079264 -245608590 - HAL1 LINE L1 -970 1537 1377 660 256 76 19 chr2 5079675 5079937 -245607917 - HAL1 LINE L1 -1119 1388 1112 589 302 109 13 chr2 5079963 5080274 -245607580 - HAL1 LINE L1 -1540 967 627 1182 238 32 18 chr2 5080475 5080757 -245607097 - HAL1 LINE L1 -2208 299 14 182 322 132 40 chr2 5080925 5081099 -245606755 - MIR SINE MIR 0 262 73 291 334 62 15 chr2 5081657 5081821 -245606033 + MIR SINE MIR 5 171 -37 32 0 0 0 chr2 5081868 5081900 -245605954 + AT_rich Low_complexity Low_complexity 1 32 0 532 330 84 44 chr2 5082054 5082471 -245605383 + L2 LINE L2 2204 2644 -670 2718 116 36 3 chr2 5082471 5082834 -245605020 + THE1C LTR MaLR 1 375 0 532 330 84 44 chr2 5082834 5082894 -245604960 + L2 LINE L2 2644 2700 -614 309 297 89 0 chr2 5083255 5083356 -245604498 + L2 LINE L2 3204 3313 0 203 224 20 0 chr2 5083431 5083480 -245604374 + (TAAA)n Simple_repeat Simple_repeat 1 50 0 305 89 0 0 chr2 5086406 5086451 -245601403 + AluSc SINE Alu 253 297 -2 2631 51 0 0 chr2 5086718 5087029 -245600825 - AluYa5 SINE Alu 0 311 1 228 347 0 21 chr2 5088041 5088136 -245599718 + MIR SINE MIR 24 116 -92 2380 85 3 0 chr2 5088219 5088526 -245599328 - AluY SINE Alu -3 308 1 2092 104 42 3 chr2 5089525 5089813 -245598041 + AluSx SINE Alu 2 300 -12 388 293 129 30 chr2 5090177 5090409 -245597445 + MLT1J2 LTR MaLR 48 302 -148 213 21 21 83 chr2 5090697 5090745 -245597109 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 446 235 18 12 chr2 5091023 5091189 -245596665 + GA-rich Low_complexity Low_complexity 1 167 0 291 343 71 7 chr2 5092389 5092529 -245595325 + MIR SINE MIR 20 168 -94 181 362 48 38 chr2 5092636 5092741 -245595113 - L2 LINE L2 -22 3250 3145 2301 52 38 17 chr2 5092948 5093238 -245594616 + AluY SINE Alu 1 296 -15 276 322 86 53 chr2 5093788 5093940 -245593914 - L2 LINE L2 -4 3268 3112 232 360 35 9 chr2 5094759 5094873 -245592981 - MIR SINE MIR -76 132 16 260 341 31 23 chr2 5096467 5096596 -245591258 - MER5B DNA MER1_type -44 134 5 2000 137 3 0 chr2 5096661 5096954 -245590900 + AluSx SINE Alu 1 294 -18 248 111 0 0 chr2 5099336 5099372 -245588482 - U2 snRNA snRNA -152 36 1 328 177 51 0 chr2 5099388 5099467 -245588387 - MIR SINE MIR -115 147 65 2289 75 0 4 chr2 5099471 5099819 -245588035 - AluY SINE Alu 0 347 1 291 54 0 0 chr2 5100593 5100630 -245587224 + (TATG)n Simple_repeat Simple_repeat 2 38 0 256 131 16 16 chr2 5101029 5101090 -245586764 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 793 337 38 27 chr2 5101103 5101673 -245586181 - L2 LINE L2 0 3313 2737 776 226 27 27 chr2 5101696 5101882 -245585972 + MLT2B1 LTR ERVL 1 186 -334 1912 197 33 3 chr2 5102057 5102423 -245585431 + MLT2B1 LTR ERVL 144 520 0 404 351 71 14 chr2 5102440 5102651 -245585203 - L2 LINE L2 -605 2709 2487 22 0 0 0 chr2 5103391 5103413 -245584441 + AT_rich Low_complexity Low_complexity 1 22 0 887 192 0 11 chr2 5103420 5103656 -245584198 - AluJb SINE Alu -17 295 1 276 30 0 0 chr2 5103674 5103707 -245584147 + (A)n Simple_repeat Simple_repeat 1 33 0 2152 297 158 22 chr2 5104046 5105238 -245582616 + L2 LINE L2 1933 3277 -36 2094 132 0 0 chr2 5105431 5105726 -245582128 - AluSx SINE Alu -17 295 1 21 57 0 0 chr2 5105829 5105864 -245581990 + AT_rich Low_complexity Low_complexity 1 35 0 22799 104 3 2 chr2 5105962 5109890 -245577964 - L1PA7 LINE L1 -4 6465 2541 1620 127 17 0 chr2 5109898 5110135 -245577719 - L1PA7 LINE L1 -6213 248 8 551 282 23 0 chr2 5110473 5110693 -245577161 - L1MEc LINE L1 -5466 930 706 467 366 51 15 chr2 5110709 5111040 -245576814 - L1MEc LINE L1 -5941 455 113 1034 204 194 142 chr2 5111048 5111828 -245576026 + MER52A LTR ERV1 667 1486 -269 433 252 16 16 chr2 5111822 5111949 -245575905 + MER52A LTR ERV1 1599 1725 -30 * 236 288 0 0 chr2 5112173 5112246 -245575608 - MER5A DNA MER1_type -113 76 4 231 351 14 0 chr2 5113071 5113145 -245574709 - L2 LINE L2 -206 3066 2992 362 343 30 18 chr2 5113159 5113325 -245574529 + MIR SINE MIR 42 209 -53 1499 227 41 78 chr2 5113337 5113822 -245574032 + MLT1C LTR MaLR 1 467 0 292 283 186 0 chr2 5115119 5115232 -245572622 - L2 LINE L2 -1 3312 3179 455 251 123 18 chr2 5115588 5115751 -245572103 + MIR SINE MIR 2 181 -81 246 358 13 20 chr2 5116468 5116619 -245571235 - MIR3 SINE MIR -4 204 55 228 304 33 22 chr2 5117251 5117343 -245570511 - MIR3 SINE MIR -3 205 113 194 294 0 0 chr2 5118591 5118642 -245569212 - MIR SINE MIR -65 143 93 195 352 62 52 chr2 5119785 5119978 -245567876 + MIR SINE MIR 20 214 -48 227 240 132 107 chr2 5120081 5120202 -245567652 + MIR SINE MIR 61 184 -78 393 239 97 13 chr2 5120239 5120394 -245567460 - MIR SINE MIR -14 248 81 1044 232 30 4 chr2 5122191 5122424 -245565430 + MLT1B LTR MaLR 152 390 0 2540 133 11 3 chr2 5122575 5122936 -245564918 - THE1B LTR MaLR 0 364 1 1254 272 32 3 chr2 5122972 5123343 -245564511 + L1ME2 LINE L1 3938 4319 -1827 888 262 40 15 chr2 5123395 5123723 -245564131 + L1ME2 LINE L1 4409 4744 -1402 1091 280 35 8 chr2 5123723 5124327 -245563527 + L1ME2 LINE L1 4996 5616 -550 1096 217 122 9 chr2 5124339 5124845 -245563009 - MLT1E1 LTR MaLR -14 640 1 1771 235 43 50 chr2 5124852 5125412 -245562442 + L1ME2 LINE L1 5617 6332 -2 223 344 86 6 chr2 5129252 5129415 -245558439 - L3 LINE CR1 -570 1007 832 313 255 0 85 chr2 5129452 5129558 -245558296 - MIR SINE MIR -7 255 159 328 292 101 17 chr2 5129955 5130133 -245557721 + MIR SINE MIR 8 200 -62 195 282 14 28 chr2 5130535 5130606 -245557248 + MIR SINE MIR 69 138 -124 6177 166 59 20 chr2 5131805 5132544 -245555310 + Tigger3b DNA MER2_type 1 805 -2223 1552 190 35 7 chr2 5132544 5132834 -245555020 + AluJb SINE Alu 1 298 -14 6177 166 59 20 chr2 5132834 5133278 -245554576 + Tigger3b DNA MER2_type 805 1230 -1 2544 38 0 0 chr2 5133671 5133961 -245553893 - AluY SINE Alu -21 290 1 323 311 0 0 chr2 5134009 5134099 -245553755 + L1MC4 LINE L1 6614 6703 -1339 237 183 50 0 chr2 5134116 5134176 -245553678 + L1MCa LINE L1 2006 2068 -4358 * 258 256 47 0 chr2 5134143 5134229 -245553625 - L1MC4 LINE L1 -1339 6703 6614 207 100 0 0 chr2 5134234 5134264 -245553590 + (TA)n Simple_repeat Simple_repeat 1 30 0 237 174 0 0 chr2 5134269 5134315 -245553539 - LTR66 LTR ERVL -171 439 394 234 191 0 0 chr2 5134277 5134324 -245553530 + LTR66 LTR ERVL 394 440 -170 * 236 131 16 66 chr2 5134348 5134409 -245553445 - LTR66 LTR ERVL -171 439 382 197 175 38 12 chr2 5134616 5134630 -245553224 + (TA)n Simple_repeat Simple_repeat 1 13 -69 1912 99 8 8 chr2 5134630 5134893 -245552961 + AluSc SINE Alu 35 297 -12 197 175 38 12 chr2 5134893 5134958 -245552896 + (TA)n Simple_repeat Simple_repeat 13 82 0 827 281 68 35 chr2 5137111 5137631 -245550223 + L1ME LINE L1 1071 1553 -4873 1148 248 73 29 chr2 5137665 5138241 -245549613 + L1ME LINE L1 5290 5889 -557 1899 201 70 27 chr2 5138241 5138685 -245549169 - MLT1C LTR MaLR 0 467 5 1148 248 73 29 chr2 5138685 5138723 -245549131 + L1ME LINE L1 5889 5924 -522 877 120 0 0 chr2 5139408 5139563 -245548291 + AluSp/q SINE Alu 168 322 0 6571 63 141 13 chr2 5139702 5140599 -245547255 - L1PA5 LINE L1 0 6154 5228 23274 54 3 0 chr2 5140702 5143630 -245544224 - L1P LINE L1 -818 5328 2391 230 175 79 48 chr2 5144855 5144918 -245542936 - MLT1G1 LTR MaLR -1 554 490 1403 72 0 15 chr2 5144924 5145119 -245542735 - AluY SINE Alu -13 298 107 338 250 126 18 chr2 5145120 5145473 -245542381 - MLT1G1 LTR MaLR -66 529 83 253 336 77 10 chr2 5145676 5145780 -245542074 - MIR3 SINE MIR -84 124 14 209 265 0 0 chr2 5146240 5146289 -245541565 - MIR SINE MIR -56 206 158 940 219 73 155 chr2 5146513 5146964 -245540890 + MLT2B1 LTR ERVL 1 414 0 23 78 0 0 chr2 5147857 5147908 -245539946 + AT_rich Low_complexity Low_complexity 1 51 0 21 82 0 0 chr2 5198933 5198982 -245488872 + AT_rich Low_complexity Low_complexity 1 49 0 2714 214 78 0 chr2 5198986 5199562 -245488292 + L1M2b LINE L1 184 804 -6405 3369 209 33 23 chr2 5199573 5200429 -245487425 + L1M2b LINE L1 1568 2431 -4778 309 286 118 8 chr2 5200785 5200904 -245486950 - MIR SINE MIR -6 256 125 2298 87 7 10 chr2 5200921 5201221 -245486633 + AluSq SINE Alu 1 299 -14 601 158 44 3 chr2 5201541 5201672 -245486182 - L1MA4 LINE L1 -143 6148 6015 601 214 71 0 chr2 5201673 5201813 -245486041 + L1MA4 LINE L1 6151 6300 0 219 366 62 22 chr2 5202397 5202624 -245485230 - MIR SINE MIR -6 256 21 229 278 135 32 chr2 5203707 5203833 -245484021 + L2 LINE L2 3112 3250 -22 4989 230 19 11 chr2 5205205 5206444 -245481410 + L1M1 LINE L1 480 2407 -5158 2048 160 16 34 chr2 5207802 5208190 -245479664 + L1MC1 LINE L1 5939 6319 -14 24 32 0 0 chr2 5208221 5208252 -245479602 + AT_rich Low_complexity Low_complexity 1 31 0 1541 209 39 7 chr2 5208256 5208538 -245479316 - AluJb SINE Alu -11 291 1 185 266 129 73 chr2 5208680 5208804 -245479050 + MIR3 SINE MIR 67 197 -11 876 204 72 19 chr2 5209175 5209521 -245478333 + MER4B-int LTR ERV1 1702 2960 -2362 * 1032 211 45 59 chr2 5209507 5210292 -245477562 + MER4B-int LTR ERV1 1546 2439 -4319 2568 48 3 10 chr2 5211070 5211383 -245476471 + AluY SINE Alu 1 311 0 280 278 43 81 chr2 5212023 5212140 -245475714 - LTR33 LTR ERVL -19 502 395 2520 192 108 27 chr2 5212140 5212610 -245475244 + MLT2B3 LTR ERVL 3 519 -35 477 34 0 0 chr2 5212610 5212669 -245475185 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2520 192 108 27 chr2 5212669 5212709 -245475145 + MLT2B3 LTR ERVL 519 554 0 280 278 43 81 chr2 5212709 5212800 -245475054 - LTR33 LTR ERVL -126 395 302 319 352 23 16 chr2 5213027 5213155 -245474699 - MIR SINE MIR -62 146 18 457 288 65 0 chr2 5213534 5213673 -245474181 - MIR3 SINE MIR -31 177 30 314 307 98 7 chr2 5213813 5213966 -245473888 + MER5A DNA MER1_type 17 183 -6 192 218 64 77 chr2 5214071 5214149 -245473705 - L2 LINE L2 -6 3307 3231 2747 13 7 0 chr2 5214417 5214721 -245473133 - AluYa5 SINE Alu -5 306 1 1983 146 27 0 chr2 5214933 5215234 -245472620 - AluSx SINE Alu -2 310 2 193 243 68 27 chr2 5215309 5215383 -245472471 - MIR SINE MIR -66 142 66 208 402 0 0 chr2 5215678 5215780 -245472074 - MIR SINE MIR -113 149 48 525 301 49 30 chr2 5215924 5216127 -245471727 - MLT1H LTR MaLR -226 323 117 885 137 53 69 chr2 5216229 5216420 -245471434 + THE1B LTR MaLR 183 364 0 4376 225 26 38 chr2 5216420 5217292 -245470562 + L1M2 LINE L1 2633 3481 -3367 1667 177 20 7 chr2 5217292 5217586 -245470268 + AluJb SINE Alu 1 298 -14 4376 225 26 38 chr2 5217586 5218251 -245469603 + L1M2 LINE L1 3481 4152 -2696 789 161 25 6 chr2 5218351 5218512 -245469342 + L1M2 LINE L1 2010 2173 -4676 225 0 0 0 chr2 5218512 5218537 -245469317 + (CA)n Simple_repeat Simple_repeat 2 26 0 732 206 14 0 chr2 5218539 5218680 -245469174 + L1M2 LINE L1 2495 2637 -4212 2099 115 58 60 chr2 5218680 5219045 -245468809 + THE1B LTR MaLR 1 364 0 10894 105 37 4 chr2 5219046 5220574 -245467280 + THE1B-int LTR MaLR 2 1580 0 1232 167 13 35 chr2 5220574 5220802 -245467052 + THE1B LTR MaLR 1 223 -152 1272 231 23 13 chr2 5221912 5222211 -245465643 - AluJb SINE Alu 0 302 1 315 0 0 0 chr2 5222647 5222682 -245465172 + (TG)n Simple_repeat Simple_repeat 2 36 0 2022 124 3 3 chr2 5222710 5223008 -245464846 - AluY SINE Alu -13 298 1 527 276 33 28 chr2 5223020 5223031 -245464823 - L1M3c LINE L1 -4846 1119 1110 2205 89 4 0 chr2 5223031 5223312 -245464542 - AluY SINE Alu -29 282 1 527 276 33 28 chr2 5223312 5223514 -245464340 - L1M3c LINE L1 -4855 1110 898 24 67 0 0 chr2 5223572 5223617 -245464237 + AT_rich Low_complexity Low_complexity 1 45 0 1782 165 118 48 chr2 5223757 5223799 -245464055 - MSTA LTR MaLR 0 428 390 2252 143 21 26 chr2 5223799 5224176 -245463678 + THE1C LTR MaLR 1 375 0 1782 165 118 48 chr2 5224176 5224533 -245463321 - MSTA LTR MaLR -38 390 1 2072 172 6 0 chr2 5224534 5224894 -245462960 - MSTA-int LTR MaLR -1 1650 1289 385 188 25 0 chr2 5224894 5224974 -245462880 - MSTA-int LTR MaLR -1523 128 47 236 208 112 80 chr2 5225646 5225771 -245462083 + MIR SINE MIR 65 193 -69 2837 207 28 5 chr2 5225828 5226407 -245461447 - MER6A DNA MER2_type -13 592 1 1764 180 49 27 chr2 5226867 5227234 -245460620 + THE1C LTR MaLR 1 375 0 180 0 0 0 chr2 5227996 5228016 -245459838 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1848 154 0 3 chr2 5228440 5228733 -245459121 - AluSg SINE Alu -10 300 9 188 353 67 34 chr2 5228923 5229042 -245458812 - MIR3 SINE MIR -83 125 3 3026 135 41 2 chr2 5229962 5230430 -245457424 - LTR19A LTR ERV1 0 486 1 2192 89 4 0 chr2 5231403 5231722 -245456132 + AluY SINE Alu 1 320 0 227 250 87 43 chr2 5232525 5232617 -245455237 + LTR16C LTR ERVL 394 489 -2 419 259 186 14 chr2 5232893 5233113 -245454741 + L1M4 LINE L1 4869 5126 -1020 319 189 0 14 chr2 5233111 5233185 -245454669 + L1ME2 LINE L1 6077 6149 -15 * 182 263 152 10 chr2 5233700 5233799 -245454055 + L2 LINE L2 3138 3250 -22 509 278 76 65 chr2 5237247 5237510 -245450344 - MLT1J LTR MaLR -244 267 2 195 235 0 0 chr2 5238578 5238629 -245449225 + (TG)n Simple_repeat Simple_repeat 2 52 0 342 0 0 0 chr2 5238751 5238789 -245449065 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 0 0 0 chr2 5239725 5239749 -245448105 + AT_rich Low_complexity Low_complexity 1 24 0 186 342 103 8 chr2 5242036 5242153 -245445701 + MIR SINE MIR 122 249 -13 236 281 70 0 chr2 5242340 5242397 -245445457 + MIR SINE MIR 66 126 -82 1698 206 28 0 chr2 5246118 5246574 -245441280 - MLT2B1 LTR ERVL 0 520 1 216 297 16 0 chr2 5247741 5247805 -245440049 - MIR SINE MIR -110 152 88 318 264 29 106 chr2 5249238 5249446 -245438408 + L1MEd LINE L1 332 523 -5596 396 0 0 0 chr2 5250087 5250131 -245437723 + (CA)n Simple_repeat Simple_repeat 2 45 0 228 35 0 0 chr2 5250970 5250999 -245436855 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2127 101 11 0 chr2 5251000 5251277 -245436577 - AluSp SINE Alu -33 280 1 247 348 90 45 chr2 5252886 5253130 -245434724 - L2 LINE L2 -27 3245 2991 211 336 53 30 chr2 5253111 5253242 -245434612 - L2 LINE L2 -456 2858 2725 * 223 273 70 39 chr2 5253529 5253657 -245434197 - L2 LINE L2 -935 2379 2248 645 194 7 0 chr2 5253936 5254080 -245433774 + L1MA9 LINE L1 6166 6310 -2 1772 187 13 7 chr2 5254102 5254412 -245433442 + AluJb SINE Alu 1 312 0 345 292 81 27 chr2 5255503 5255688 -245432166 - MIR SINE MIR -9 253 59 2804 16 0 10 chr2 5255948 5256261 -245431593 + AluYa5 SINE Alu 1 310 -1 1584 214 13 34 chr2 5256522 5256901 -245430953 - MLT1A2 LTR MaLR -2 372 2 609 258 171 15 chr2 5256974 5257238 -245430616 + MLT1G1 LTR MaLR 291 595 0 466 299 71 51 chr2 5257985 5258377 -245429477 + L2 LINE L2 2914 3313 0 237 132 0 0 chr2 5259128 5259166 -245428688 + (TA)n Simple_repeat Simple_repeat 1 38 0 1237 91 0 141 chr2 5260237 5260391 -245427463 + MER30 DNA MER1_type 5 114 -116 1578 42 0 5 chr2 5260391 5260582 -245427272 - L1PA5 LINE L1 0 6154 5965 1237 91 0 141 chr2 5260582 5260669 -245427185 + MER30 DNA MER1_type 114 212 -18 199 61 61 0 chr2 5261958 5261991 -245425863 + A-rich Low_complexity Low_complexity 3 37 0 232 244 51 0 chr2 5262290 5262368 -245425486 - L1 LINE L1 -1161 4985 4904 2128 145 0 0 chr2 5262520 5262817 -245425037 - AluSx SINE Alu -15 297 1 516 325 42 0 chr2 5263951 5264155 -245423699 + HERVL LTR ERVL 4103 4366 -1398 220 353 17 17 chr2 5264694 5264813 -245423041 - MIR SINE MIR -107 155 37 1107 81 0 27 chr2 5265565 5265617 -245422237 + (GAAA)n Simple_repeat Simple_repeat 1 230 0 1107 81 0 27 chr2 5265617 5265802 -245422052 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 426 302 94 5 chr2 5266209 5266401 -245421453 - MIR SINE MIR -6 256 48 238 234 16 0 chr2 5267476 5267540 -245420314 - L2 LINE L2 -527 2787 2723 332 312 82 12 chr2 5267710 5267880 -245419974 + L2 LINE L2 3117 3298 -15 305 260 67 90 chr2 5270568 5270791 -245417063 - L1ME4a LINE L1 -1 6120 5903 325 239 34 15 chr2 5271243 5271272 -245416582 - L1ME4a LINE L1 -850 5296 5269 369 0 0 0 chr2 5271272 5271313 -245416541 + (TG)n Simple_repeat Simple_repeat 2 42 0 325 239 34 15 chr2 5271313 5271420 -245416434 - L1ME4a LINE L1 -877 5269 5157 7159 45 3 1 chr2 5271475 5272930 -245414924 - L1PA6 LINE L1 0 6154 4682 257 222 0 0 chr2 5272943 5273006 -245414848 - L1ME4a LINE L1 -985 5161 5099 1827 122 0 0 chr2 5274183 5274421 -245413433 + AluSx SINE Alu 1 238 -74 1682 150 3 77 chr2 5274828 5275201 -245412653 - MER4A LTR ERV1 0 664 261 656 98 10 49 chr2 5275201 5275303 -245412551 - MER4A LTR ERV1 -566 98 1 23 0 0 0 chr2 5275747 5275770 -245412084 + AT_rich Low_complexity Low_complexity 1 23 0 2213 129 0 3 chr2 5275775 5276084 -245411770 + AluSq SINE Alu 3 310 -3 225 272 0 65 chr2 5276089 5276181 -245411673 - MER5A DNA MER1_type -50 139 54 1629 199 141 111 chr2 5276429 5277333 -245410521 - LTR1B LTR ERV1 0 1020 1 268 244 103 0 chr2 5278474 5278552 -245409302 - L2 LINE L2 -17 3255 3170 22 0 0 0 chr2 5278875 5278897 -245408957 + AT_rich Low_complexity Low_complexity 1 22 0 762 120 0 0 chr2 5278929 5279037 -245408817 - L1MA3 LINE L1 -2 6303 6196 200 118 29 0 chr2 5279374 5279408 -245408446 + (CATA)n Simple_repeat Simple_repeat 4 38 0 237 196 0 0 chr2 5279416 5279472 -245408382 + (CA)n Simple_repeat Simple_repeat 2 57 0 570 291 12 36 chr2 5280295 5280546 -245407308 + MIR SINE MIR 12 256 -6 1637 173 0 11 chr2 5281480 5281746 -245406108 + AluJb SINE Alu 1 263 -49 2216 103 3 17 chr2 5281845 5282145 -245405709 + AluSg SINE Alu 1 296 -14 376 227 100 0 chr2 5283146 5283256 -245404598 - MER58B DNA MER1_type 0 341 221 1404 250 72 42 chr2 5283522 5284134 -245403720 - Charlie7 DNA MER1_type -263 2349 1720 469 312 24 5 chr2 5284174 5284379 -245403475 - Charlie7 DNA MER1_type -2070 542 334 225 179 143 36 chr2 5284408 5284464 -245403390 + Tigger5 DNA MER2_type 1 62 -2261 * 1574 139 12 0 chr2 5284462 5284714 -245403140 + Tigger5 DNA MER2_type 2062 2316 -7 436 341 36 14 chr2 5284737 5285013 -245402841 - Charlie7 DNA MER1_type -2330 282 1 451 228 19 6 chr2 5285337 5285654 -245402200 + (TG)n Simple_repeat Simple_repeat 1 321 0 437 206 11 22 chr2 5285707 5285887 -245401967 + (TG)n Simple_repeat Simple_repeat 1 178 0 410 214 11 22 chr2 5285933 5286111 -245401743 + (TG)n Simple_repeat Simple_repeat 1 176 0 784 209 91 5 chr2 5287379 5287589 -245400265 + L1MB8 LINE L1 5945 6172 -6 243 0 0 0 chr2 5288305 5288332 -245399522 + (A)n Simple_repeat Simple_repeat 1 27 0 971 268 166 13 chr2 5288872 5289324 -245398530 + MLT1H LTR MaLR 4 524 -25 263 263 22 0 chr2 5289907 5289980 -245397874 + MIR SINE MIR 45 121 -87 366 297 79 42 chr2 5290604 5290769 -245397085 - MIR3 SINE MIR -10 198 28 2663 87 34 8 chr2 5291183 5291563 -245396291 + MLT2A1 LTR ERVL 1 390 -54 222 37 0 0 chr2 5291563 5291590 -245396264 + (TA)n Simple_repeat Simple_repeat 2 28 0 387 54 0 18 chr2 5291721 5291777 -245396077 - MLT2A2 LTR ERVL 0 453 399 249 650 0 13 chr2 5291777 5291934 -245395920 + (TA)n Simple_repeat Simple_repeat 2 156 0 326 58 19 19 chr2 5291963 5292015 -245395839 - MLT2A2 LTR ERVL -2 451 400 298 20 82 20 chr2 5292001 5292050 -245395804 + MLT2A1 LTR ERVL 393 444 0 * 417 278 82 64 chr2 5292249 5292893 -245394961 + L1MEd LINE L1 594 1249 -4870 934 271 41 39 chr2 5293109 5293544 -245394310 + L1ME1 LINE L1 5571 6006 -160 456 271 25 88 chr2 5293537 5293777 -245394077 + L1ME1 LINE L1 5895 6119 -47 * 1710 194 108 14 chr2 5293917 5294335 -245393519 - MSTB2 LTR MaLR 0 457 1 29 0 0 0 chr2 5294383 5294412 -245393442 + AT_rich Low_complexity Low_complexity 1 29 0 1567 207 78 58 chr2 5294506 5294671 -245393183 - L1M1 LINE L1 -738 5428 5268 261 0 0 0 chr2 5294671 5294700 -245393154 + (TG)n Simple_repeat Simple_repeat 2 30 0 189 0 0 0 chr2 5294699 5294720 -245393134 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 1567 207 78 58 chr2 5294700 5294720 -245393134 - L1M1 LINE L1 -898 5268 5250 1954 147 0 28 chr2 5294720 5295040 -245392814 - AluSx SINE Alu -1 311 1 1567 207 78 58 chr2 5295040 5295685 -245392169 - L1M1 LINE L1 -916 5250 4639 1027 307 19 5 chr2 5295686 5296057 -245391797 - L1MEc LINE L1 -5713 683 308 2579 87 8 46 chr2 5296271 5296661 -245391193 - THE1C LTR MaLR 0 375 1 214 300 14 14 chr2 5296679 5296749 -245391105 + GA-rich Low_complexity Low_complexity 2 71 0 350 226 0 36 chr2 5297314 5297398 -245390456 - MIR SINE MIR 0 262 182 5395 129 4 0 chr2 5297452 5297801 -245390053 - L1PB1 LINE L1 -3 6148 5802 261 0 0 0 chr2 5297801 5297830 -245390024 + (TA)n Simple_repeat Simple_repeat 1 29 0 5395 129 4 0 chr2 5297830 5298716 -245389138 - L1PB1 LINE L1 -349 5802 4898 245 269 76 50 chr2 5299105 5299224 -245388630 - MLT1K LTR MaLR -60 528 407 931 153 71 6 chr2 5299307 5299477 -245388377 - MLT1A1 LTR MaLR 0 365 185 206 203 0 17 chr2 5299851 5299910 -245387944 + CT-rich Low_complexity Low_complexity 1 58 0 33 0 0 0 chr2 5299964 5299997 -245387857 + AT_rich Low_complexity Low_complexity 1 33 0 1663 115 70 0 chr2 5301216 5301503 -245386351 - L1MA8 LINE L1 -5 6286 5980 231 133 0 0 chr2 5301540 5301585 -245386269 + (TG)n Simple_repeat Simple_repeat 2 46 0 390 308 84 42 chr2 5302301 5302658 -245385196 - L1ME4a LINE L1 -2 6119 5748 1446 201 35 6 chr2 5302817 5303160 -245384694 - L1MA8 LINE L1 -1 6290 5938 624 191 43 0 chr2 5303161 5303276 -245384578 - FLAM_C SINE Alu -10 133 14 2265 97 3 7 chr2 5303448 5303747 -245384107 - AluY SINE Alu -13 298 1 274 338 120 15 chr2 5303834 5303967 -245383887 + MIR SINE MIR 49 195 -67 226 309 59 0 chr2 5304005 5304073 -245383781 - MIR SINE MIR -101 161 90 233 293 53 67 chr2 5304669 5304819 -245383035 + L2 LINE L2 3111 3258 -55 295 282 113 81 chr2 5304943 5305191 -245382663 + MIR SINE MIR 1 256 -6 317 281 45 19 chr2 5305286 5305420 -245382434 + MLT1J2 LTR MaLR 6 142 -304 457 266 24 16 chr2 5305425 5305549 -245382305 - MER94 DNA DNA -9 125 1 366 239 84 42 chr2 5305671 5305813 -245382041 + MLT1J2 LTR MaLR 284 431 -19 21 0 0 0 chr2 5305979 5306000 -245381854 + AT_rich Low_complexity Low_complexity 1 21 0 1748 194 39 19 chr2 5306726 5307184 -245380670 + MLT2B1 LTR ERVL 1 513 -2 2029 116 39 0 chr2 5308506 5308790 -245379064 - AluSq SINE Alu -18 295 1 183 129 0 0 chr2 5308937 5308968 -245378886 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 783 196 21 11 chr2 5308973 5309162 -245378692 - L1MA3 LINE L1 -1 6304 6114 1117 40 34 17 chr2 5309296 5309320 -245378534 + (GAAA)n Simple_repeat Simple_repeat 1 202 0 1117 40 34 17 chr2 5309320 5309495 -245378359 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 2367 196 41 53 chr2 5310237 5310629 -245377225 - L1MC3 LINE L1 0 7785 7390 297 0 0 0 chr2 5310629 5310662 -245377192 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 4913 45 0 0 chr2 5310672 5311268 -245376586 - L1PA5 LINE L1 -3 6151 5556 2367 196 41 53 chr2 5311268 5311470 -245376384 - L1MC3 LINE L1 -404 7381 7187 2960 257 65 47 chr2 5311537 5313948 -245373906 - L1M4c LINE L1 -2427 3955 1442 193 252 30 8 chr2 5313983 5314114 -245373740 + (TA)n Simple_repeat Simple_repeat 1 134 0 1563 236 48 21 chr2 5314123 5314501 -245373353 - L1M3c LINE L1 -4516 1955 1457 2459 73 3 0 chr2 5314501 5314804 -245373050 - AluY SINE Alu -7 304 1 1563 236 48 21 chr2 5314804 5315006 -245372848 - L1M3c LINE L1 -5014 1457 1262 343 274 32 48 chr2 5315060 5315184 -245372670 - L1M4 LINE L1 -993 5153 5032 773 150 101 97 chr2 5315249 5315291 -245372563 - MSTA LTR MaLR 0 428 388 2089 141 21 26 chr2 5315291 5315668 -245372186 + THE1C LTR MaLR 1 375 0 773 150 101 97 chr2 5315668 5315832 -245372022 - MSTA LTR MaLR -40 388 221 1936 150 6 0 chr2 5315945 5316259 -245371595 - THE1C-int LTR MaLR -47 1604 1289 440 214 94 0 chr2 5316259 5316376 -245371478 - THE1C-int LTR MaLR -1523 128 1 1072 187 75 85 chr2 5316376 5316751 -245371103 - THE1C LTR MaLR 0 375 5 21 71 0 0 chr2 5316948 5316990 -245370864 + AT_rich Low_complexity Low_complexity 1 42 0 361 318 78 7 chr2 5320081 5320235 -245367619 - MIR SINE MIR -11 251 87 226 316 22 81 chr2 5322357 5322493 -245365361 - MIR SINE MIR -116 146 19 405 281 125 66 chr2 5322994 5323403 -245364451 - MLT1H LTR MaLR -2 547 115 229 235 37 26 chr2 5324124 5324264 -245363590 - L2 LINE L2 -3 3310 3116 367 257 62 49 chr2 5324363 5324507 -245363347 + MIR SINE MIR 61 206 -56 468 0 0 0 chr2 5324561 5324613 -245363241 + (TG)n Simple_repeat Simple_repeat 2 53 0 189 159 0 114 chr2 5325711 5325755 -245362099 - L2 LINE L2 -11 3261 3223 254 319 21 14 chr2 5325778 5325919 -245361935 - L1MA9 LINE L1 -38 6274 6133 1840 135 46 0 chr2 5327885 5328195 -245359659 - AluSx SINE Alu 0 312 1 933 127 8 0 chr2 5328379 5328513 -245359341 + AluSg/x SINE Alu 164 298 -14 1061 174 15 0 chr2 5328862 5329057 -245358797 + L1PB1 LINE L1 3 200 -6663 * 4014 117 16 12 chr2 5329049 5330208 -245357646 + L1PB1 LINE L1 625 1937 -4926 1413 216 63 23 chr2 5330341 5330689 -245357165 + LTR10A LTR ERV1 181 542 -67 7830 207 40 45 chr2 5330705 5332761 -245355093 + L1PB1 LINE L1 1932 3997 -2870 1720 77 0 14 chr2 5332761 5332981 -245354873 - AluY SINE Alu -15 296 80 7830 207 40 45 chr2 5332981 5333467 -245354387 + L1PB1 LINE L1 3997 4484 -2383 2233 102 0 7 chr2 5333467 5333762 -245354092 + AluSc SINE Alu 1 293 -16 7830 207 40 45 chr2 5333762 5335970 -245351884 + L1PB1 LINE L1 4484 6652 -215 247 284 75 0 chr2 5336269 5336336 -245351518 + L2 LINE L2 3200 3271 -1 2371 226 32 12 chr2 5336523 5336980 -245350874 + L1MA9 LINE L1 5701 6173 -139 198 71 0 0 chr2 5336980 5337008 -245350846 + (CA)n Simple_repeat Simple_repeat 1 28 0 2371 226 32 12 chr2 5337008 5337112 -245350742 + L1MA9 LINE L1 6173 6273 -39 221 365 25 45 chr2 5337830 5338030 -245349824 - MIR SINE MIR -14 248 53 2010 57 0 4 chr2 5339453 5339698 -245348156 - AluY SINE Alu -67 244 1 705 213 37 84 chr2 5339984 5340521 -245347333 - L1MC4 LINE L1 -6 8036 7373 219 267 33 0 chr2 5340757 5340817 -245347037 + L2 LINE L2 3230 3291 -22 385 355 48 35 chr2 5340909 5341140 -245346714 + L2 LINE L2 2851 3084 -188 2173 95 3 0 chr2 5343590 5343909 -245343945 + AluSx SINE Alu 1 320 0 1344 226 30 39 chr2 5345303 5345728 -245342126 + L1MC4 LINE L1 7634 8042 0 183 248 69 79 chr2 5348547 5348648 -245339206 - L3 LINE CR1 -641 936 837 249 274 108 49 chr2 5349903 5350005 -245337849 + MIR SINE MIR 26 133 -75 1610 78 10 5 chr2 5352027 5352259 -245335595 - AluSg/x SINE Alu 0 308 76 240 247 0 0 chr2 5352934 5353019 -245334835 + GA-rich Low_complexity Low_complexity 2 86 0 22 0 0 0 chr2 5353137 5353159 -245334695 + AT_rich Low_complexity Low_complexity 1 22 0 610 287 56 15 chr2 5353926 5354121 -245333733 + MLT1A2 LTR MaLR 1 203 -171 757 229 24 7 chr2 5354147 5354369 -245333485 + MLT1A2 LTR MaLR 154 372 -2 23 0 0 0 chr2 5354702 5354725 -245333129 + AT_rich Low_complexity Low_complexity 1 23 0 311 270 61 86 chr2 5354794 5354957 -245332897 - MIR SINE MIR -70 192 34 206 252 19 68 chr2 5357536 5357639 -245330215 + MIR SINE MIR 114 211 -51 203 269 58 0 chr2 5357909 5357961 -245329893 - MIR SINE MIR -60 148 94 309 285 199 8 chr2 5360575 5360731 -245327123 + MIR3 SINE MIR 2 192 -16 266 288 196 18 chr2 5360735 5360898 -245326956 + MIR SINE MIR 5 196 -66 846 156 7 0 chr2 5361787 5361928 -245325926 - L1MA8 LINE L1 -5 6286 6145 241 222 19 0 chr2 5362317 5362371 -245325483 + (TAA)n Simple_repeat Simple_repeat 1 55 0 259 274 0 0 chr2 5362457 5362519 -245325335 + MIR SINE MIR 184 245 -17 607 322 0 14 chr2 5362607 5362818 -245325036 - MIR SINE MIR -10 252 45 2232 190 21 73 chr2 5362820 5363668 -245324186 + L1MA9 LINE L1 4813 5630 -682 3944 128 67 38 chr2 5363784 5364474 -245323380 + L1MA9 LINE L1 5603 6312 0 398 364 57 43 chr2 5365502 5365942 -245321912 - L3 LINE CR1 -910 667 222 212 75 0 50 chr2 5366839 5366879 -245320975 + (TCCC)n Simple_repeat Simple_repeat 1 38 0 228 389 0 0 chr2 5369645 5369758 -245318096 + MER58 DNA MER1_type 169 281 -2139 * 293 265 0 0 chr2 5369750 5369818 -245318036 + MER58 DNA MER1_type 2353 2420 0 9526 183 26 2 chr2 5370166 5372721 -245315133 - L1PA13 LINE L1 0 7601 5016 1383 206 0 0 chr2 5372722 5373004 -245314850 - L1P LINE L1 -932 5214 4933 * 8941 238 31 37 chr2 5372994 5378559 -245309295 - L1PA13 LINE L1 -2586 4998 10 2288 90 0 34 chr2 5379006 5379328 -245308526 - AluY SINE Alu 0 311 1 285 328 34 62 chr2 5379723 5379900 -245307954 - HAL1 LINE L1 -2300 207 36 2805 115 0 6 chr2 5379910 5380276 -245307578 - THE1B LTR MaLR 0 364 1 209 308 96 48 chr2 5380611 5380715 -245307139 + MIR SINE MIR 39 147 -61 353 206 16 0 chr2 5381191 5381254 -245306600 + L1MC4 LINE L1 6832 6895 -1147 267 374 32 0 chr2 5381321 5381444 -245306410 + MIR SINE MIR 59 185 -77 180 0 0 0 chr2 5382571 5382591 -245305263 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 358 336 141 0 chr2 5383377 5383526 -245304328 - MIR SINE MIR -13 249 80 209 174 0 43 chr2 5384451 5384497 -245303357 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 23 0 0 0 chr2 5384604 5384627 -245303227 + AT_rich Low_complexity Low_complexity 1 23 0 250 391 65 0 chr2 5385288 5385426 -245302428 + L2 LINE L2 3123 3269 -3 765 330 19 4 chr2 5385614 5385872 -245301982 - MIR SINE MIR 0 262 1 253 305 52 45 chr2 5386264 5386418 -245301436 + MIR SINE MIR 66 220 -42 297 250 78 43 chr2 5387174 5387290 -245300564 + MIR3 SINE MIR 35 154 -54 33 56 0 0 chr2 5387560 5387614 -245300240 + AT_rich Low_complexity Low_complexity 1 54 0 228 279 65 58 chr2 5387745 5387899 -245299955 - MER104 DNA Tc2 -1 179 25 755 221 77 10 chr2 5389836 5390031 -245297823 - MER20 DNA MER1_type 0 219 12 185 300 43 0 chr2 5390089 5390159 -245297695 - MIR3 SINE MIR -7 201 129 211 348 63 25 chr2 5390194 5390352 -245297502 + L2 LINE L2 2679 2842 -472 229 367 0 20 chr2 5390458 5390556 -245297298 + L2 LINE L2 3162 3257 -56 2164 172 27 12 chr2 5391279 5391692 -245296162 - MSTB1 LTR MaLR -13 419 1 317 303 0 45 chr2 5391878 5392033 -245295821 + LTR16A1 LTR ERVL 300 447 -10 611 226 40 40 chr2 5392108 5392135 -245295719 - MER45A DNA AcHobo -1403 178 152 1686 179 82 9 chr2 5392135 5392475 -245295379 - MLT1A1 LTR MaLR 0 365 1 611 226 40 40 chr2 5392475 5392624 -245295230 - MER45A DNA AcHobo -1428 153 2 216 302 0 0 chr2 5392869 5392922 -245294932 + L2 LINE L2 3218 3270 -2 604 216 275 0 chr2 5394116 5394352 -245293502 - MLT1F1 LTR MaLR -2 540 240 286 229 16 0 chr2 5394385 5394507 -245293347 + GA-rich Low_complexity Low_complexity 1 124 0 617 175 104 27 chr2 5394536 5394719 -245293135 - MLT1F1 LTR MaLR -370 197 1 21 0 0 0 chr2 5396851 5396872 -245290982 + AT_rich Low_complexity Low_complexity 1 21 0 1643 204 45 60 chr2 5397382 5397852 -245290002 - MLT1C LTR MaLR -1 466 4 632 339 39 9 chr2 5398515 5398745 -245289109 - MIR SINE MIR -4 258 22 1905 104 20 30 chr2 5398745 5399042 -245288812 - AluSq SINE Alu -15 298 5 2141 89 3 78 chr2 5399286 5399669 -245288185 + MER4A LTR ERV1 1 354 -310 476 210 178 19 chr2 5399720 5399877 -245287977 + MER4C LTR ERV1 284 465 0 233 267 227 39 chr2 5399914 5400297 -245287557 - L2 LINE L2 -170 3143 2619 2305 119 117 8 chr2 5400297 5400683 -245287171 - MSTA LTR MaLR 0 428 1 233 267 227 39 chr2 5400683 5400741 -245287113 - L2 LINE L2 -694 2619 2573 608 286 0 19 chr2 5401301 5401462 -245286392 - MIR SINE MIR 0 262 105 475 287 90 27 chr2 5402439 5402662 -245285192 - L2 LINE L2 -3 3310 3074 239 122 122 0 chr2 5402672 5402721 -245285133 - MLT2B3 LTR ERVL 0 453 399 200 108 0 75 chr2 5402725 5402818 -245285036 + (TA)n Simple_repeat Simple_repeat 2 87 0 1812 215 23 64 chr2 5402822 5403363 -245284491 - MLT2B3 LTR ERVL -44 508 1 507 349 20 49 chr2 5403398 5403757 -245284097 - L2 LINE L2 -308 3005 2658 445 210 21 59 chr2 5403955 5404141 -245283713 + L1MB7 LINE L1 2025 2203 -4181 1557 179 58 14 chr2 5404148 5404439 -245283415 + AluJo SINE Alu 1 304 -8 550 86 32 0 chr2 5404450 5404543 -245283311 + GA-rich Low_complexity Low_complexity 1 96 0 373 245 211 0 chr2 5404654 5404963 -245282891 + L1MB7 LINE L1 3125 3507 -2875 311 200 31 0 chr2 5405077 5405142 -245282712 + L1MC4 LINE L1 6637 6703 -1339 192 234 0 0 chr2 5405143 5405190 -245282664 + (TATATG)n Simple_repeat Simple_repeat 4 50 0 347 250 0 22 chr2 5405190 5405282 -245282572 + L1MC4 LINE L1 6614 6703 -1339 246 32 0 0 chr2 5405288 5405319 -245282535 + (GA)n Simple_repeat Simple_repeat 2 32 0 1061 127 20 0 chr2 5405320 5405470 -245282384 - AluSg/x SINE Alu -39 273 121 4260 246 67 19 chr2 5405474 5406474 -245281380 + L1MB7 LINE L1 3789 4900 -1482 1911 126 4 11 chr2 5406474 5406765 -245281089 - AluSx SINE Alu 0 303 15 4260 246 67 19 chr2 5406765 5407405 -245280449 + L1MB7 LINE L1 4900 5508 -874 201 208 21 0 chr2 5407405 5407453 -245280401 + (TA)n Simple_repeat Simple_repeat 1 49 0 2028 210 52 43 chr2 5407526 5408160 -245279694 + L1MB7 LINE L1 5714 6353 -67 1192 253 51 16 chr2 5408255 5408627 -245279227 - MLT1E3 LTR MaLR -93 531 147 1812 62 8 4 chr2 5410164 5410405 -245277449 + L1PA6 LINE L1 5913 6154 0 360 293 69 26 chr2 5412354 5412470 -245275384 + MIR SINE MIR 19 139 -69 183 80 0 0 chr2 5413348 5413373 -245274481 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 1680 94 11 26 chr2 5414441 5414708 -245273146 + L1PA11 LINE L1 5891 6153 -21 1396 227 32 0 chr2 5414728 5415041 -245272813 - MLT1A1 LTR MaLR -42 323 1 1837 179 144 2 chr2 5415620 5416029 -245271825 + MLT1C LTR MaLR 1 467 0 256 330 134 18 chr2 5416608 5416832 -245271022 + MIR SINE MIR 12 261 -1 1823 137 23 0 chr2 5417906 5418205 -245269649 - THE1B LTR MaLR -5 359 54 244 197 30 15 chr2 5418385 5418451 -245269403 + L1PB1 LINE L1 5284 5350 -804 4295 111 16 17 chr2 5418564 5419255 -245268599 + L1PB1 LINE L1 5462 6151 0 558 284 95 46 chr2 5419312 5419639 -245268215 - HAL1b LINE L1 -393 955 613 312 302 28 9 chr2 5419653 5419759 -245268095 - HAL1b LINE L1 -797 551 444 21 71 0 0 chr2 5419820 5419862 -245267992 + AT_rich Low_complexity Low_complexity 1 42 0 509 262 16 49 chr2 5419879 5420123 -245267731 - HAL1b LINE L1 -768 580 345 253 262 0 0 chr2 5420124 5420185 -245267669 + CT-rich Low_complexity Low_complexity 2 62 0 21 36 0 0 chr2 5420285 5420313 -245267541 + AT_rich Low_complexity Low_complexity 1 28 0 469 312 67 19 chr2 5420781 5421107 -245266747 - L1MC/D LINE L1 -748 5398 5118 217 224 0 17 chr2 5421286 5421344 -245266510 + CT-rich Low_complexity Low_complexity 2 58 0 * 264 202 60 0 chr2 5421339 5421423 -245266431 + (TA)n Simple_repeat Simple_repeat 2 90 0 204 263 0 0 chr2 5421554 5421630 -245266224 + (TA)n Simple_repeat Simple_repeat 2 77 0 9615 156 48 10 chr2 5421632 5423425 -245264429 + Tigger2 DNA MER2_type 854 2715 -3 249 167 302 0 chr2 5524556 5524652 -245163202 - L1ME3A LINE L1 0 6170 6046 435 19 0 0 chr2 5524743 5524795 -245163059 + (TG)n Simple_repeat Simple_repeat 2 53 0 247 229 73 9 chr2 5524987 5525096 -245162758 - L1MC/D LINE L1 -1932 4214 4099 2871 232 41 24 chr2 5525105 5526638 -245161216 + L1MB7 LINE L1 4623 6179 -5 382 125 42 0 chr2 5526638 5526710 -245161144 + AluS SINE Alu 1 75 -228 854 188 0 6 chr2 5527505 5527686 -245160168 + (CA)n Simple_repeat Simple_repeat 1 180 0 298 259 54 60 chr2 5529016 5529182 -245158672 - LTR50 LTR ERVL -615 180 16 197 315 96 55 chr2 5529510 5529656 -245158198 - L2 LINE L2 -48 3224 3073 234 81 0 0 chr2 5529738 5529775 -245158079 + (T)n Simple_repeat Simple_repeat 1 37 0 190 328 118 0 chr2 5530196 5530315 -245157539 - MIR3 SINE MIR -43 165 33 2353 103 3 0 chr2 5530937 5531249 -245156605 - AluSq SINE Alu 0 313 1 317 321 128 66 chr2 5531540 5531963 -245155891 + L2 LINE L2 2811 3259 -13 239 191 0 29 chr2 5533785 5533793 -245154061 + (TA)n Simple_repeat Simple_repeat 1 8 -58 2341 149 20 43 chr2 5533793 5534236 -245153618 - Tigger2a DNA MER2_type 0 434 2 239 191 0 29 chr2 5534236 5534282 -245153572 + (TA)n Simple_repeat Simple_repeat 8 55 -11 1668 186 54 9 chr2 5534282 5534615 -245153239 + MER7A DNA MER2_type 1 346 0 239 191 0 29 chr2 5534615 5534627 -245153227 + (TA)n Simple_repeat Simple_repeat 55 66 0 341 253 51 34 chr2 5535317 5535523 -245152331 + L1M4 LINE L1 5218 5426 -744 10900 154 25 11 chr2 5535652 5537658 -245150196 + Tigger1 DNA MER2_type 1 2034 -384 320 102 0 0 chr2 5537743 5537792 -245150062 + Tigger1 DNA MER2_type 2044 2092 -326 441 78 62 0 chr2 5537793 5537857 -245149997 + Alu SINE Alu 222 289 -21 1659 178 34 0 chr2 5537859 5538185 -245149669 + Tigger1 DNA MER2_type 2080 2416 -2 896 235 49 57 chr2 5538513 5539044 -245148810 - L1PBb LINE L1 -4800 1403 781 26 0 0 0 chr2 5540120 5540146 -245147708 + AT_rich Low_complexity Low_complexity 1 26 0 741 167 52 52 chr2 5540700 5540874 -245146980 + MER58A DNA MER1_type 32 205 -19 219 273 80 87 chr2 5541348 5541498 -245146356 - MER5A DNA MER1_type -40 149 1 299 246 56 47 chr2 5543701 5543856 -245143998 + MIR SINE MIR 2 151 -57 2262 117 0 3 chr2 5544999 5545308 -245142546 + AluSc SINE Alu 1 308 -1 2465 55 0 13 chr2 5546273 5546585 -245141269 - AluY SINE Alu -3 308 1 345 135 58 19 chr2 5547069 5547173 -245140681 - Looper DNA T2_type -78 1480 1373 221 30 61 0 chr2 5547173 5547206 -245140648 + T-rich Low_complexity Low_complexity 1 35 0 2625 98 0 10 chr2 5547212 5547601 -245140253 - L1PA8A LINE L1 -28 6103 5719 * 3231 108 15 5 chr2 5547597 5548466 -245139388 + L1PA8A LINE L1 4848 5726 -405 297 0 0 0 chr2 5548466 5548499 -245139355 + (CA)n Simple_repeat Simple_repeat 2 34 0 3231 108 15 5 chr2 5548499 5548517 -245139337 + L1PA8A LINE L1 5726 5742 -389 1174 164 10 0 chr2 5548598 5548806 -245139048 - MER2 DNA MER2_type -134 211 2 631 266 77 10 chr2 5548828 5549125 -245138729 - Looper DNA T2_type -1241 317 1 516 248 51 0 chr2 5550207 5550344 -245137510 + HAL1 LINE L1 51 194 -2313 418 314 63 20 chr2 5550352 5550747 -245137107 + HAL1 LINE L1 1051 1462 -1045 813 270 46 42 chr2 5550867 5551344 -245136510 + HAL1 LINE L1 1902 2380 -127 2292 109 3 0 chr2 5551940 5552252 -245135602 - AluSp SINE Alu 0 313 1 39 50 0 0 chr2 5553269 5553329 -245134525 + AT_rich Low_complexity Low_complexity 1 60 0 23 68 0 0 chr2 5553411 5553455 -245134399 + AT_rich Low_complexity Low_complexity 1 44 0 598 222 6 35 chr2 5553518 5553711 -245134143 - L1 LINE L1 -2369 3777 3590 302 280 16 40 chr2 5554586 5554711 -245133143 - L1ME3A LINE L1 -3 6167 6046 2002 163 7 0 chr2 5554901 5555207 -245132647 - AluSx SINE Alu -4 308 1 4422 154 54 71 chr2 5555568 5556657 -245131197 + MER11C LTR ERVK 1 1071 0 1278 200 71 26 chr2 5557040 5557417 -245130437 - L1MC2 LINE L1 -2 7772 6148 1115 134 41 0 chr2 5557421 5557592 -245130262 - AluSg/x SINE Alu -1 311 134 2256 110 3 0 chr2 5557592 5557884 -245129970 - AluSp SINE Alu -15 298 6 3627 181 63 94 chr2 5557884 5559019 -245128835 - L1MC3 LINE L1 -380 7405 6306 256 325 144 8 chr2 5559319 5559454 -245128400 + MIR SINE MIR 11 159 -57 1520 178 90 26 chr2 5559469 5559812 -245128042 - MLT1A1 LTR MaLR 0 365 1 183 205 0 0 chr2 5561232 5561271 -245126583 + T-rich Low_complexity Low_complexity 1 39 0 854 190 13 0 chr2 5561716 5561874 -245125980 + FRAM SINE Alu 1 160 -6 219 241 35 58 chr2 5562029 5562116 -245125738 + MIR SINE MIR 56 140 -122 235 334 99 60 chr2 5562284 5562637 -245125217 - L2 LINE L2 0 3272 2906 27 29 0 0 chr2 5562922 5562956 -245124898 + AT_rich Low_complexity Low_complexity 1 34 0 251 270 11 45 chr2 5563495 5563673 -245124181 + (CTTAT)n Simple_repeat Simple_repeat 5 176 0 1273 208 0 4 chr2 5564031 5564303 -245123551 + AluJb SINE Alu 42 312 0 735 282 53 18 chr2 5564956 5565183 -245122671 + MIR SINE MIR 15 249 -13 234 305 184 29 chr2 5566085 5566259 -245121595 - MIR SINE MIR -61 201 1 1202 248 103 7 chr2 5567072 5567488 -245120366 - MLT1C LTR MaLR -6 461 6 189 0 0 0 chr2 5567635 5567656 -245120198 + (TGG)n Simple_repeat Simple_repeat 1 21 0 216 111 0 0 chr2 5567671 5567707 -245120147 + (TG)n Simple_repeat Simple_repeat 1 36 0 199 354 101 69 chr2 5568303 5568769 -245119085 + L2 LINE L2 417 897 -2417 484 139 0 0 chr2 5569041 5569113 -245118741 - AluS SINE Alu -13 297 226 29 28 0 0 chr2 5569302 5569338 -245118516 + AT_rich Low_complexity Low_complexity 1 36 0 269 186 14 0 chr2 5569441 5569511 -245118343 + (TATG)n Simple_repeat Simple_repeat 2 72 0 186 269 60 45 chr2 5570275 5570342 -245117512 - L2 LINE L2 0 3313 3246 237 139 0 0 chr2 5570589 5570632 -245117222 + (TA)n Simple_repeat Simple_repeat 2 44 0 225 218 23 23 chr2 5570635 5570722 -245117132 + L1MC4 LINE L1 6614 6700 -1342 310 256 49 0 chr2 5570726 5570808 -245117046 - L1MC4 LINE L1 -1340 6702 6617 307 262 71 0 chr2 5570759 5570843 -245117011 + L1MC4 LINE L1 6614 6703 -1339 * 497 297 95 54 chr2 5571133 5571692 -245116162 - L2 LINE L2 -13 3300 2702 1105 107 0 47 chr2 5571701 5571870 -245115984 - AluSg SINE Alu -30 282 122 201 74 0 0 chr2 5571873 5571900 -245115954 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1033 92 0 0 chr2 5571902 5572033 -245115821 - AluSg SINE Alu -179 131 1 1181 285 203 65 chr2 5572033 5573637 -245114217 - L2 LINE L2 -599 2715 891 881 289 90 18 chr2 5574619 5575120 -245112734 + L1MCc LINE L1 861 1397 -5026 532 300 73 45 chr2 5575124 5575618 -245112236 + L1MCc LINE L1 1406 1913 -5028 231 282 35 0 chr2 5575667 5575841 -245112013 + L1MCc LINE L1 2814 2993 -4129 336 117 36 108 chr2 5575900 5576011 -245111843 - L1MA9 LINE L1 -2 6310 6208 * 871 160 46 16 chr2 5576007 5576154 -245111700 + L1MA9 LINE L1 5632 5788 -524 204 40 0 0 chr2 5576154 5576179 -245111675 + (TG)n Simple_repeat Simple_repeat 2 26 0 871 160 46 16 chr2 5576179 5576225 -245111629 + L1MA9 LINE L1 5788 5831 -481 757 152 25 7 chr2 5576227 5576390 -245111464 + L1MA9 LINE L1 5775 5946 -243 3670 197 92 42 chr2 5576519 5576794 -245111060 + L1MC3 LINE L1 6591 6851 -934 189 0 0 0 chr2 5576794 5576815 -245111039 + (CA)n Simple_repeat Simple_repeat 1 21 0 3670 197 92 42 chr2 5576815 5576836 -245111018 + L1MC3 LINE L1 6851 6869 -916 3169 148 25 17 chr2 5576836 5577358 -245110496 + MER1A DNA MER1_type 2 527 0 3670 197 92 42 chr2 5577358 5578198 -245109656 + L1MC3 LINE L1 6869 7785 0 1667 260 59 47 chr2 5578217 5579261 -245108593 + L1MCc LINE L1 3167 4223 -2718 316 360 39 39 chr2 5579989 5580247 -245107607 + L2 LINE L2 2826 3083 -189 2488 64 0 0 chr2 5580551 5580849 -245107005 - AluY SINE Alu -13 298 1 25 0 0 0 chr2 5580949 5580974 -245106880 + AT_rich Low_complexity Low_complexity 1 25 0 810 330 216 19 chr2 5581020 5581315 -245106539 + L2 LINE L2 555 791 -2523 541 195 81 0 chr2 5581315 5581438 -245106416 - FLAM_A SINE Alu 0 133 1 810 330 216 19 chr2 5581438 5582590 -245105264 + L2 LINE L2 791 2287 -1027 392 335 90 75 chr2 5582817 5583273 -245104581 + L2 LINE L2 2851 3313 0 193 200 30 140 chr2 5583446 5583546 -245104308 - L2 LINE L2 -190 3082 2994 260 235 20 10 chr2 5583739 5583781 -245104073 + (TA)n Simple_repeat Simple_repeat 2 42 -58 2244 116 0 3 chr2 5583781 5584091 -245103763 + AluSg SINE Alu 1 309 -1 260 235 20 10 chr2 5584091 5584146 -245103708 + (TA)n Simple_repeat Simple_repeat 42 100 0 329 336 50 0 chr2 5585067 5585186 -245102668 - MIR3 SINE MIR -35 173 49 267 327 65 42 chr2 5585441 5585609 -245102245 + MER5A DNA MER1_type 17 188 -1 2253 104 3 0 chr2 5585811 5586108 -245101746 - AluSx SINE Alu -14 298 1 21 36 0 0 chr2 5586171 5586199 -245101655 + AT_rich Low_complexity Low_complexity 1 28 0 677 186 30 9 chr2 5587200 5587538 -245100316 + CT-rich Low_complexity Low_complexity 1 345 0 342 224 14 46 chr2 5587555 5587910 -245099944 + CT-rich Low_complexity Low_complexity 1 343 0 2288 109 3 0 chr2 5588664 5588976 -245098878 + AluSp SINE Alu 1 313 0 500 160 15 15 chr2 5590295 5590426 -245097428 + GA-rich Low_complexity Low_complexity 1 131 0 317 319 17 9 chr2 5590520 5590636 -245097218 + MIR3 SINE MIR 74 190 -18 967 263 134 26 chr2 5591184 5591534 -245096320 + MLT1B LTR MaLR 3 390 0 1545 123 53 53 chr2 5592587 5592905 -245094949 - THE1C LTR MaLR -57 318 1 28 29 0 0 chr2 5592945 5592980 -245094874 + AT_rich Low_complexity Low_complexity 1 35 0 197 139 23 0 chr2 5592980 5593023 -245094831 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 199 339 80 9 chr2 5594316 5594428 -245093426 + MIR SINE MIR 21 140 -68 190 356 67 34 chr2 5594585 5594734 -245093120 - MIR SINE MIR -95 167 14 242 330 11 0 chr2 5595326 5595417 -245092437 + MLT1I LTR MaLR 72 163 -246 217 280 60 40 chr2 5596482 5596582 -245091272 + MIR SINE MIR 20 121 -141 249 361 69 0 chr2 5596643 5596773 -245091081 - L2 LINE L2 0 3313 3175 238 261 0 0 chr2 5596785 5596831 -245091023 + L2 LINE L2 3209 3254 -18 223 221 174 0 chr2 5597254 5597340 -245090514 - MIR SINE MIR -71 191 91 288 324 15 7 chr2 5597391 5597527 -245090327 - LTR67 LTR ERVL -27 530 394 285 278 11 33 chr2 5599042 5599132 -245088722 + L2 LINE L2 3220 3307 -6 367 308 159 0 chr2 5599799 5599994 -245087860 - MIR SINE MIR -26 236 11 194 316 71 10 chr2 5600890 5600988 -245086866 - MIR SINE MIR -55 153 50 238 344 0 0 chr2 5601202 5601266 -245086588 + MIR SINE MIR 83 146 -62 1565 182 100 9 chr2 5601274 5601603 -245086251 - MLT1A1 LTR MaLR -6 359 1 1185 219 149 10 chr2 5601639 5601940 -245085914 - MER2 DNA MER2_type -1 343 1 21 0 0 0 chr2 5603313 5603334 -245084520 + AT_rich Low_complexity Low_complexity 1 21 0 291 266 21 0 chr2 5603350 5603444 -245084410 + MER3 DNA MER1_type 1 96 -113 1525 246 47 30 chr2 5603450 5603917 -245083937 + L1MA9 LINE L1 5798 6272 -40 300 240 52 10 chr2 5603925 5604021 -245083833 + MER3 DNA MER1_type 99 198 -11 3624 152 0 26 chr2 5604154 5604695 -245083159 + MER1A DNA MER1_type 1 527 0 234 318 106 20 chr2 5604720 5604965 -245082889 + HAL1b LINE L1 306 571 -777 231 226 70 26 chr2 5605027 5605142 -245082712 + HAL1b LINE L1 678 797 -551 30 59 0 0 chr2 5605455 5605506 -245082348 + AT_rich Low_complexity Low_complexity 1 51 0 23 54 0 0 chr2 5605513 5605550 -245082304 + AT_rich Low_complexity Low_complexity 1 37 0 1732 133 42 52 chr2 5606256 5606565 -245081289 + AluSx SINE Alu 1 306 -6 1727 199 21 57 chr2 5606627 5606820 -245081034 + MLT1A2 LTR MaLR 1 175 -199 357 43 0 0 chr2 5606820 5606867 -245080987 + (TC)n Simple_repeat Simple_repeat 2 48 0 1727 199 21 57 chr2 5606867 5607061 -245080793 + MLT1A2 LTR MaLR 175 374 0 306 362 54 0 chr2 5607078 5607227 -245080627 + L1MC4a LINE L1 4736 4892 -1254 1144 312 62 18 chr2 5607621 5608278 -245079576 + L1MC4a LINE L1 5256 5941 -1867 24 32 0 0 chr2 5608470 5608501 -245079353 + AT_rich Low_complexity Low_complexity 1 31 0 229 359 26 0 chr2 5608779 5608857 -245078997 + MIR SINE MIR 2 81 -181 389 261 7 0 chr2 5609902 5610055 -245077799 + (TG)n Simple_repeat Simple_repeat 2 155 0 1828 125 53 11 chr2 5610244 5610525 -245077329 + AluSx SINE Alu 1 293 -19 225 0 0 0 chr2 5610608 5610633 -245077221 + (TC)n Simple_repeat Simple_repeat 2 26 0 184 306 83 9 chr2 5611043 5611151 -245076703 + MIR SINE MIR 23 138 -124 397 282 75 27 chr2 5611178 5611379 -245076475 - MIR SINE MIR -27 235 25 182 239 22 0 chr2 5611553 5611599 -245076255 - L3b LINE CR1 -9 1574 1528 375 343 66 24 chr2 5611924 5612137 -245075717 - MIR SINE MIR -32 230 9 528 122 8 98 chr2 5612335 5612458 -245075396 - L1PB2 LINE L1 -4 6147 6036 296 290 90 80 chr2 5612576 5612732 -245075122 - MIR SINE MIR -2 260 100 1344 202 10 50 chr2 5612732 5613073 -245074781 + AluJb SINE Alu 1 312 0 296 290 90 80 chr2 5613073 5613116 -245074738 - MIR SINE MIR -162 100 59 3822 157 11 5 chr2 5613350 5613962 -245073892 - L1PA15 LINE L1 -2 6163 5548 28 0 0 0 chr2 5614001 5614029 -245073825 + AT_rich Low_complexity Low_complexity 1 28 0 1852 145 78 31 chr2 5615364 5615722 -245072132 + THE1C LTR MaLR 1 375 0 8726 127 115 3 chr2 5615724 5617138 -245070716 + THE1C-int LTR MaLR 3 1575 -5 1772 152 45 73 chr2 5617147 5617529 -245070325 + THE1C LTR MaLR 5 375 0 311 328 101 0 chr2 5617913 5618032 -245069822 - L2 LINE L2 -7 3306 3176 1507 189 10 34 chr2 5618070 5618366 -245069488 - AluJo SINE Alu -23 289 1 500 240 0 0 chr2 5619689 5619789 -245068065 + MER63 DNA MER1_type 27 752 -84 335 241 25 0 chr2 5619790 5619869 -245067985 + MER63 DNA MER1_type 980 1060 -2 481 270 16 0 chr2 5620471 5620597 -245067257 - L3b LINE CR1 -331 1252 1125 217 344 56 38 chr2 5620787 5620834 -245067020 - MIR3 SINE MIR -7 201 156 2504 67 0 3 chr2 5620834 5621146 -245066708 + AluY SINE Alu 1 311 0 217 344 56 38 chr2 5621146 5621258 -245066596 - MIR3 SINE MIR -52 156 39 186 280 54 21 chr2 5621384 5621477 -245066377 + L2 LINE L2 3206 3301 -12 236 62 0 0 chr2 5623985 5624017 -245063837 + HSMAR1 DNA Mariner 3 34 -1253 2294 95 0 20 chr2 5624188 5624493 -245063361 - AluSg SINE Alu -7 303 5 219 88 0 0 chr2 5626007 5626041 -245061813 + (GA)n Simple_repeat Simple_repeat 1 34 0 586 299 88 75 chr2 5626138 5626580 -245061274 + MLT1J2 LTR MaLR 1 448 -2 520 288 73 10 chr2 5626737 5626942 -245060912 - MIR SINE MIR -37 225 8 757 148 26 9 chr2 5627343 5627458 -245060396 + FLAM_C SINE Alu 12 128 -15 205 364 156 0 chr2 5627921 5628075 -245059779 - MIR SINE MIR -12 250 73 303 313 56 17 chr2 5628541 5628720 -245059134 + MIR SINE MIR 54 239 -23 33 43 0 0 chr2 5630812 5630859 -245056995 + AT_rich Low_complexity Low_complexity 1 47 0 2651 149 2 7 chr2 5632382 5632789 -245055065 + MSTA LTR MaLR 1 405 -23 1486 121 36 9 chr2 5632789 5633013 -245054841 - MER30 DNA MER1_type 0 230 1 224 227 0 0 chr2 5633044 5633088 -245054766 + (CATA)n Simple_repeat Simple_repeat 1 44 0 302 298 36 79 chr2 5633979 5634071 -245053783 - L1M4 LINE L1 -3775 2371 2277 2308 104 7 0 chr2 5634071 5634369 -245053485 - AluSp SINE Alu -13 300 1 302 298 36 79 chr2 5634369 5634528 -245053326 - L1M4 LINE L1 -3869 2277 2131 287 164 16 0 chr2 5635021 5635082 -245052772 + (TA)n Simple_repeat Simple_repeat 1 62 0 203 369 8 8 chr2 5638685 5638807 -245049047 + (TG)n Simple_repeat Simple_repeat 1 122 0 302 347 52 6 chr2 5639164 5639337 -245048517 + MIR3 SINE MIR 5 185 -23 516 186 12 0 chr2 5640326 5640412 -245047442 - FLAM_C SINE Alu -36 107 21 344 204 54 21 chr2 5640531 5640624 -245047230 - Charlie7 DNA MER1_type -2455 157 62 2204 109 6 13 chr2 5640810 5640943 -245046911 + AluSg SINE Alu 1 133 -177 2151 104 0 13 chr2 5640943 5641278 -245046576 + AluSx SINE Alu 3 312 0 2204 109 6 13 chr2 5641278 5641455 -245046399 + AluSg SINE Alu 133 309 -1 3109 123 12 6 chr2 5641576 5642057 -245045797 - L1PA13 LINE L1 -415 5746 5263 2736 125 39 2 chr2 5642057 5642453 -245045401 + L1PA13 LINE L1 5739 6160 -3 467 236 51 97 chr2 5642518 5642713 -245045141 - MIR SINE MIR -10 252 67 358 309 86 6 chr2 5643338 5643513 -245044341 + MIR SINE MIR 49 237 -25 185 163 0 82 chr2 5643903 5643952 -245043902 - L3b LINE CR1 -13 1570 1526 1718 212 57 5 chr2 5644091 5644459 -245043395 + MLT1B LTR MaLR 3 389 -1 185 323 83 53 chr2 5645016 5645149 -245042705 + MIR SINE MIR 117 253 -9 511 278 88 32 chr2 5646611 5646827 -245041027 - MIR SINE MIR -21 241 14 205 313 101 10 chr2 5647123 5647222 -245040632 + MIR SINE MIR 40 147 -115 242 379 0 0 chr2 5647367 5647462 -245040392 + MLT1G1 LTR MaLR 431 525 -70 1288 198 62 35 chr2 5647463 5647574 -245040280 + AluJo SINE Alu 4 110 -202 2261 134 19 43 chr2 5647574 5647947 -245039907 - THE1B LTR MaLR 0 364 1 1288 198 62 35 chr2 5647947 5648123 -245039731 + AluJo SINE Alu 110 299 -13 2156 117 19 3 chr2 5648403 5648728 -245039126 - Tigger3b DNA MER2_type -564 667 338 233 87 0 0 chr2 5648743 5648789 -245039065 - LTR66 LTR ERVL -171 439 394 239 211 9 28 chr2 5648797 5648906 -245038948 + (TA)n Simple_repeat Simple_repeat 2 108 0 565 158 0 10 chr2 5648906 5649007 -245038847 - Tigger3b DNA MER2_type -902 329 230 3069 196 59 6 chr2 5649907 5650570 -245037284 - L1MC2 LINE L1 0 6344 5647 21 0 0 0 chr2 5650668 5650689 -245037165 + AT_rich Low_complexity Low_complexity 1 21 0 710 191 111 5 chr2 5651220 5651409 -245036445 + L1MD3 LINE L1 6906 7114 -881 607 235 96 24 chr2 5651414 5651580 -245036274 + MER45A DNA AcHobo 1 178 0 376 323 16 8 chr2 5651592 5651719 -245036135 - MER5A DNA MER1_type -51 138 11 413 309 74 67 chr2 5652069 5652490 -245035364 + L1MEc LINE L1 2099 2500 -3715 1769 181 0 0 chr2 5652490 5652796 -245035058 + AluSx SINE Alu 1 306 0 413 309 74 67 chr2 5652796 5652965 -245034889 + L1MEc LINE L1 2500 2666 -3549 2442 125 43 14 chr2 5654238 5654590 -245033264 - THE1B LTR MaLR 0 364 3 12286 100 11 0 chr2 5654592 5656154 -245031700 - THE1B-int LTR MaLR 0 1580 2 2481 137 31 14 chr2 5656155 5656513 -245031341 - THE1B LTR MaLR 0 364 1 22 56 0 0 chr2 5656519 5656555 -245031299 + AT_rich Low_complexity Low_complexity 1 36 0 1897 146 13 23 chr2 5658518 5658820 -245029034 - AluJo SINE Alu -13 299 1 1981 139 4 0 chr2 5658866 5659186 -245028668 + AluSx SINE Alu 1 321 0 234 116 0 0 chr2 5661519 5661562 -245026292 + (T)n Simple_repeat Simple_repeat 1 43 0 323 275 44 0 chr2 5661861 5661952 -245025902 - MIR SINE MIR -62 146 52 317 301 82 35 chr2 5662179 5662495 -245025359 + L1ME LINE L1 5352 5682 -439 467 295 45 54 chr2 5662609 5662833 -245025021 + MIR SINE MIR 14 235 -27 235 188 104 0 chr2 5663266 5663314 -245024540 + L2 LINE L2 3256 3308 -5 1754 182 3 0 chr2 5663336 5663627 -245024227 + AluJb SINE Alu 12 303 -9 5029 68 0 0 chr2 5663753 5664343 -245023511 + LTR10C LTR ERV1 1 590 -1 1767 132 81 45 chr2 5664557 5664914 -245022940 - THE1C LTR MaLR 0 375 6 2080 120 3 30 chr2 5665443 5665742 -245022112 + AluSx SINE Alu 1 291 -21 10114 245 26 29 chr2 5666795 5666976 -245020878 + L1PA16 LINE L1 1983 2163 -4686 2037 151 3 0 chr2 5666976 5667288 -245020566 + AluSp SINE Alu 1 313 0 10114 245 26 29 chr2 5667288 5668742 -245019112 + L1PA16 LINE L1 2163 3620 -3229 2146 100 10 32 chr2 5668742 5669052 -245018802 + AluSq SINE Alu 1 303 -10 10114 245 26 29 chr2 5669052 5669768 -245018086 + L1PA16 LINE L1 3620 4337 -2512 261 0 0 0 chr2 5669768 5669797 -245018057 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 10114 245 26 29 chr2 5669797 5671608 -245016246 + L1PA16 LINE L1 4337 6033 -816 404 167 14 14 chr2 5671608 5671680 -245016174 + AluJ/FRAM SINE Alu 217 288 -24 23 0 0 0 chr2 5671680 5671703 -245016151 + AT_rich Low_complexity Low_complexity 1 23 0 2560 156 53 3 chr2 5671704 5672441 -245015413 + L1PA16 LINE L1 6025 6849 -20 22 70 0 0 chr2 5672664 5672707 -245015147 + AT_rich Low_complexity Low_complexity 1 43 0 300 346 88 16 chr2 5673926 5674108 -245013746 + L2 LINE L2 3078 3272 0 227 227 0 0 chr2 5674885 5674929 -245012925 - L3 LINE CR1 -7 1570 1527 2232 109 3 0 chr2 5675134 5675427 -245012427 - AluSg SINE Alu -16 294 1 243 281 92 59 chr2 5675467 5675620 -245012234 - MIR3 SINE MIR -48 160 3 626 276 119 16 chr2 5675678 5675921 -245011933 + MLT1J LTR MaLR 1 268 -243 339 65 0 0 chr2 5676100 5676146 -245011708 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 27671 82 8 5 chr2 5676146 5680733 -245007121 - L1PA6 LINE L1 -24 6130 1532 35016 85 4 12 chr2 5680867 5685794 -245002060 - L1P2 LINE L1 -683 5471 591 1437 228 83 41 chr2 5686034 5686469 -245001385 + MLT1C LTR MaLR 8 460 -7 2054 168 90 30 chr2 5686796 5687196 -245000658 - MSTA LTR MaLR -4 424 1 319 253 183 84 chr2 5687593 5687795 -245000059 + MLT1J LTR MaLR 129 350 -161 3416 66 49 5 chr2 5688058 5688483 -244999371 - MLT2A1 LTR ERVL 0 444 1 266 309 57 16 chr2 5688683 5688877 -244998977 + L1ME4a LINE L1 5714 5915 -206 1873 102 4 8 chr2 5688888 5689144 -244998710 - AluSp SINE Alu -19 294 40 373 246 58 108 chr2 5689637 5689962 -244997892 + MER5C DNA MER1_type 14 322 -2 240 293 198 17 chr2 5691286 5691402 -244996452 - MIR SINE MIR -75 187 51 319 329 89 25 chr2 5691796 5692200 -244995654 - LTR16A LTR ERVL -13 437 8 1169 108 104 68 chr2 5692614 5692699 -244995155 - MER30 DNA MER1_type 0 230 150 2117 125 3 3 chr2 5692699 5692995 -244994859 - AluSc SINE Alu -13 296 1 1169 108 104 68 chr2 5692995 5693131 -244994723 - MER30 DNA MER1_type -80 150 1 184 328 33 0 chr2 5694192 5694253 -244993601 - L2 LINE L2 0 3272 3210 196 372 36 15 chr2 5695004 5695141 -244992713 - MIR SINE MIR -85 177 38 519 289 17 6 chr2 5695378 5695551 -244992303 - MER5B DNA MER1_type -1 177 3 220 283 17 17 chr2 5695602 5695662 -244992192 - MER5A DNA MER1_type -16 173 114 482 369 45 61 chr2 5695913 5696385 -244991469 - L2 LINE L2 -1809 1505 1042 316 265 27 13 chr2 5696477 5696615 -244991239 + MLT1I LTR MaLR 73 181 -228 890 269 88 7 chr2 5697472 5697588 -244990266 + MLT1A2 LTR MaLR 42 147 -227 252 0 0 0 chr2 5697588 5697616 -244990238 + (TG)n Simple_repeat Simple_repeat 1 28 0 890 269 88 7 chr2 5697616 5697807 -244990047 + MLT1A2 LTR MaLR 147 374 0 218 114 0 23 chr2 5698709 5698753 -244989101 + (TC)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr2 5698753 5698775 -244989079 + (CA)n Simple_repeat Simple_repeat 1 22 0 393 264 155 29 chr2 5699849 5700050 -244987804 + MIR SINE MIR 3 213 -49 195 42 0 0 chr2 5700083 5700107 -244987747 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 801 31 0 0 chr2 5700108 5700204 -244987650 + (TCTA)n Simple_repeat Simple_repeat 4 99 0 302 67 22 0 chr2 5700493 5700538 -244987316 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 202 367 93 4 chr2 5700565 5700843 -244987011 + L3 LINE CR1 1128 1430 -147 438 318 42 42 chr2 5703120 5703356 -244984498 + MIR SINE MIR 21 256 -6 1320 88 0 0 chr2 5703718 5703888 -244983966 + AluY SINE Alu 126 295 -16 187 296 74 0 chr2 5704890 5704944 -244982910 - MER5B DNA MER1_type 0 178 121 38 22 0 0 chr2 5705387 5705432 -244982422 + AT_rich Low_complexity Low_complexity 1 45 0 2254 118 0 0 chr2 5705432 5705736 -244982118 + AluSc SINE Alu 3 306 -3 234 292 119 64 chr2 5706344 5706563 -244981291 + MIR SINE MIR 13 243 -19 793 219 39 0 chr2 5706835 5707040 -244980814 + L1MD2 LINE L1 5656 5868 -491 2299 95 0 0 chr2 5707984 5708290 -244979564 + AluY SINE Alu 1 306 -5 2079 90 62 3 chr2 5708326 5708615 -244979239 + AluSq SINE Alu 1 306 -7 394 274 15 22 chr2 5710158 5710293 -244977561 - MER94 DNA DNA 0 134 1 451 235 76 0 chr2 5710551 5710683 -244977171 - MER63 DNA MER1_type -276 786 19 12131 162 56 9 chr2 5711440 5713749 -244974105 - Tigger1 DNA MER2_type 0 2418 3 366 309 53 33 chr2 5713800 5714073 -244973781 - L1ME2 LINE L1 -4 6162 5879 1368 263 85 48 chr2 5714176 5714500 -244973354 - L1ME2 LINE L1 -277 5889 5578 2103 94 10 39 chr2 5714500 5714807 -244973047 - AluSg SINE Alu -11 299 2 1368 263 85 48 chr2 5714807 5716197 -244971657 - L1ME2 LINE L1 -588 5578 4124 26 0 0 0 chr2 5716215 5716241 -244971613 + AT_rich Low_complexity Low_complexity 1 26 0 293 274 105 0 chr2 5716241 5716365 -244971489 - L1ME2 LINE L1 -2210 3936 3800 22 70 0 0 chr2 5716394 5716437 -244971417 + AT_rich Low_complexity Low_complexity 1 43 0 29 60 0 0 chr2 5716842 5716892 -244970962 + AT_rich Low_complexity Low_complexity 1 50 0 442 177 14 34 chr2 5717489 5717636 -244970218 + CT-rich Low_complexity Low_complexity 1 144 0 820 126 6 27 chr2 5717636 5717819 -244970035 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 296 297 7 83 chr2 5718316 5718461 -244969393 + MIR SINE MIR 47 180 -82 408 348 45 8 chr2 5718534 5718781 -244969073 + LTR16A LTR ERVL 56 311 -139 237 65 0 0 chr2 5718786 5718817 -244969037 + (CTTG)n Simple_repeat Simple_repeat 2 32 0 1768 147 53 3 chr2 5718820 5719105 -244968749 - AluSx SINE Alu -13 299 1 212 186 17 0 chr2 5720111 5720170 -244967684 + CT-rich Low_complexity Low_complexity 1 60 0 2184 132 6 0 chr2 5720593 5720904 -244966950 + AluSq SINE Alu 1 313 0 979 232 31 37 chr2 5721322 5721649 -244966205 - L1MB8 LINE L1 0 6178 5854 184 360 0 0 chr2 5722298 5722348 -244965506 + L2 LINE L2 3206 3255 -17 501 135 0 0 chr2 5722351 5722440 -244965414 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 210 139 0 70 chr2 5722440 5722483 -244965371 + (GGGGA)n Simple_repeat Simple_repeat 5 44 0 186 208 0 0 chr2 5723045 5723093 -244964761 + (TA)n Simple_repeat Simple_repeat 1 48 0 189 234 31 62 chr2 5724021 5724085 -244963769 - L2 LINE L2 -11 3302 3241 444 330 62 20 chr2 5724122 5724339 -244963515 - MIR SINE MIR -1 261 37 3808 79 119 0 chr2 5726208 5726361 -244961493 - LTR66 LTR ERVL 0 610 477 327 113 0 0 chr2 5726361 5726423 -244961431 + (TA)n Simple_repeat Simple_repeat 2 63 0 3808 79 119 0 chr2 5726423 5726814 -244961040 - LTR66 LTR ERVL -133 477 1 27 0 0 0 chr2 5727655 5727682 -244960172 + AT_rich Low_complexity Low_complexity 1 27 0 226 294 43 22 chr2 5728021 5728113 -244959741 - MIR3 SINE MIR -6 202 109 27 29 0 0 chr2 5728476 5728510 -244959344 + AT_rich Low_complexity Low_complexity 1 34 0 1922 147 0 0 chr2 5729064 5729349 -244958505 + AluSg SINE Alu 1 285 -25 355 224 129 20 chr2 5729398 5729545 -244958309 + L1MDb LINE L1 1178 1340 -5069 5575 168 24 45 chr2 5731220 5732474 -244955380 - Tigger3b DNA MER2_type -3 1228 1 402 306 80 55 chr2 5733543 5733941 -244953913 + L2 LINE L2 1901 2308 -1006 895 229 89 50 chr2 5734287 5734645 -244953209 - MLT1A2 LTR MaLR -2 372 1 731 196 7 0 chr2 5735871 5736009 -244951845 - AluJb SINE Alu 0 312 174 2449 231 63 13 chr2 5736136 5736657 -244951197 - L1MB7 LINE L1 -101 6083 5590 2425 71 0 10 chr2 5736657 5736968 -244950886 - AluY SINE Alu -3 308 1 2449 231 63 13 chr2 5736968 5737695 -244950159 - L1MB7 LINE L1 -594 5590 4786 710 207 27 0 chr2 5737695 5737845 -244950009 - MLT1A1 LTR MaLR 0 365 212 1279 173 38 114 chr2 5738028 5738254 -244949600 + MLT1B LTR MaLR 1 182 -208 2060 139 0 3 chr2 5738254 5738557 -244949297 + AluSx SINE Alu 2 303 -9 1279 173 38 114 chr2 5738557 5738752 -244949102 + MLT1B LTR MaLR 182 390 0 713 179 20 4 chr2 5739271 5739527 -244948327 + (TG)n Simple_repeat Simple_repeat 1 260 0 2053 103 33 98 chr2 5742195 5742271 -244945583 - THE1B LTR MaLR 0 364 285 2075 127 14 0 chr2 5742271 5742562 -244945292 - AluSx SINE Alu -17 295 1 2053 103 33 98 chr2 5742562 5742874 -244944980 - THE1B LTR MaLR -79 285 1 265 286 53 85 chr2 5742967 5743134 -244944720 - MIR SINE MIR -27 235 73 1411 189 103 49 chr2 5743134 5743504 -244944350 - MLT1B LTR MaLR 0 390 1 265 286 53 85 chr2 5743504 5743525 -244944329 - MIR SINE MIR -189 73 53 213 298 53 0 chr2 5743738 5743795 -244944059 + MIR SINE MIR 1 60 -202 338 217 0 0 chr2 5743843 5743912 -244943942 - L2 LINE L2 -3 3310 3242 303 28 0 0 chr2 5745010 5745046 -244942808 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2567 50 0 0 chr2 5745049 5745350 -244942504 - AluY SINE Alu -10 301 1 697 150 36 7 chr2 5746270 5746410 -244941444 + L1PA15 LINE L1 6021 6164 -1 341 282 103 5 chr2 5746453 5746666 -244941188 + HAL1b LINE L1 260 493 -855 227 276 20 0 chr2 5746844 5746942 -244940912 + (TA)n Simple_repeat Simple_repeat 2 101 0 258 32 0 0 chr2 5746990 5747021 -244940833 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2165 100 11 0 chr2 5747023 5747302 -244940552 - AluSq SINE Alu -28 285 4 1863 182 42 25 chr2 5747347 5747697 -244940157 - L1PB4 LINE L1 0 6156 5796 234 62 0 0 chr2 5747697 5747729 -244940125 + (TG)n Simple_repeat Simple_repeat 2 33 0 1863 182 42 25 chr2 5747729 5747811 -244940043 - L1PB4 LINE L1 -360 5796 5717 225 65 0 0 chr2 5748520 5748551 -244939303 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 2223 116 0 7 chr2 5748620 5748930 -244938924 + AluSq SINE Alu 1 308 -5 259 337 37 37 chr2 5749225 5749412 -244938442 + MIR SINE MIR 71 257 -5 651 236 21 82 chr2 5751503 5751736 -244936118 + MLT1A1 LTR MaLR 1 219 -146 242 248 31 39 chr2 5753524 5753653 -244934201 - L1ME LINE L1 -202 5919 5792 231 88 0 0 chr2 5753674 5753708 -244934146 + (TG)n Simple_repeat Simple_repeat 2 35 0 531 299 55 10 chr2 5754188 5754397 -244933457 - MIR SINE MIR -29 233 17 383 37 0 19 chr2 5754614 5754668 -244933186 + (TG)n Simple_repeat Simple_repeat 2 54 0 2239 96 33 7 chr2 5755760 5756062 -244931792 + AluSg SINE Alu 1 310 0 254 231 0 0 chr2 5756208 5756273 -244931581 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 1682 166 39 34 chr2 5756420 5756776 -244931078 - MLT1A1 LTR MaLR -7 358 1 793 176 0 0 chr2 5756777 5756925 -244930929 - L1MB1 LINE L1 -17 6151 6004 411 183 0 0 chr2 5756988 5757070 -244930784 + AluJ/FRAM SINE Alu 222 303 -9 199 383 8 39 chr2 5757368 5757496 -244930358 + L2 LINE L2 3148 3271 -1 744 171 8 0 chr2 5758424 5758547 -244929307 + FLAM_C SINE Alu 2 125 -8 274 371 61 0 chr2 5758699 5758831 -244929023 + MIR SINE MIR 53 192 -70 231 170 0 0 chr2 5758902 5758949 -244928905 + (TG)n Simple_repeat Simple_repeat 1 47 0 467 308 48 14 chr2 5759376 5759522 -244928332 + MER5B DNA MER1_type 28 178 0 193 296 14 28 chr2 5759599 5759670 -244928184 + L2 LINE L2 3194 3263 -9 1143 281 132 14 chr2 5760065 5760582 -244927272 - L2 LINE L2 -575 2739 2162 401 283 121 38 chr2 5761300 5761646 -244926208 + LTR16A1 LTR ERVL 71 445 -12 2270 108 7 0 chr2 5761796 5762103 -244925751 + AluSg SINE Alu 1 309 -1 1768 177 29 13 chr2 5762897 5763280 -244924574 + MLT2B1 LTR ERVL 2 436 -79 184 57 29 29 chr2 5763287 5763322 -244924532 + (TTATA)n Simple_repeat Simple_repeat 5 39 0 21 71 0 0 chr2 5763754 5763796 -244924058 + AT_rich Low_complexity Low_complexity 1 42 0 268 385 39 26 chr2 5765686 5765842 -244922012 + MIR SINE MIR 15 172 -90 2238 169 26 28 chr2 5767029 5767456 -244920398 + MSTB LTR MaLR 1 426 0 1093 232 14 21 chr2 5767526 5767806 -244920048 + MLT1A1 LTR MaLR 1 278 -87 2314 106 0 0 chr2 5767932 5768234 -244919620 + AluSx SINE Alu 1 302 -10 461 268 176 0 chr2 5768245 5768387 -244919467 - MER96 DNA MER1_type? -1 174 8 508 296 36 13 chr2 5768760 5769067 -244918787 + L1M4 LINE L1 3387 3700 -2446 235 138 0 52 chr2 5769082 5769140 -244918714 + (TA)n Simple_repeat Simple_repeat 2 56 0 560 247 71 61 chr2 5769149 5769445 -244918409 + L1M4 LINE L1 3719 4017 -2129 1721 161 32 7 chr2 5769541 5769844 -244918010 - AluJb SINE Alu 0 310 1 1684 242 138 9 chr2 5769961 5770656 -244917198 + L1M4 LINE L1 4493 5277 -869 6208 186 17 5 chr2 5770664 5772494 -244915360 + L1P5 LINE L1 3823 5679 -472 275 257 67 0 chr2 5772789 5772894 -244914960 + MARNA DNA Mariner 461 572 -14 23 68 0 0 chr2 5773484 5773528 -244914326 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 5773992 5774022 -244913832 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 5774143 5774171 -244913683 + AT_rich Low_complexity Low_complexity 1 28 0 223 306 61 20 chr2 5774391 5774489 -244913365 - MIR SINE MIR -95 167 66 258 400 40 0 chr2 5776104 5776229 -244911625 - L2 LINE L2 -237 3035 2906 1270 187 239 16 chr2 5776293 5776673 -244911181 - MER31B LTR ERV1 -1 465 1 181 281 73 31 chr2 5776699 5776795 -244911059 - L2 LINE L2 -480 2834 2735 366 332 75 11 chr2 5777540 5777727 -244910127 + MIR SINE MIR 53 251 -11 212 175 25 0 chr2 5778550 5778590 -244909264 + CT-rich Low_complexity Low_complexity 1 41 0 210 208 75 0 chr2 5779310 5779363 -244908491 - MIR SINE MIR -142 120 64 194 333 25 37 chr2 5779399 5779480 -244908374 + MIR SINE MIR 63 142 -120 3779 113 53 14 chr2 5779712 5779939 -244907915 - L1MA3 LINE L1 0 6305 6088 269 68 23 0 chr2 5779939 5779983 -244907871 + (GTTTG)n Simple_repeat Simple_repeat 2 46 0 3779 113 53 14 chr2 5779983 5780393 -244907461 - L1MA3 LINE L1 -217 6088 5643 255 217 0 0 chr2 5780393 5780453 -244907401 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 787 115 3 0 chr2 5780456 5780588 -244907266 - L1MA3 LINE L1 -651 5649 5514 232 341 57 16 chr2 5781328 5781451 -244906403 + MIR SINE MIR 67 194 -68 1995 113 60 0 chr2 5781453 5781737 -244906117 + AluSx SINE Alu 1 301 -11 1494 190 10 14 chr2 5782017 5782306 -244905548 + AluJo SINE Alu 1 288 -24 30 45 0 0 chr2 5782306 5782350 -244905504 + AT_rich Low_complexity Low_complexity 1 44 0 204 264 138 11 chr2 5782482 5782569 -244905285 + L2 LINE L2 3174 3271 -1 186 103 0 0 chr2 5782619 5782648 -244905206 + (TG)n Simple_repeat Simple_repeat 2 30 0 2181 105 7 0 chr2 5782995 5783281 -244904573 + AluSx SINE Alu 1 288 -24 319 326 17 12 chr2 5784698 5784870 -244902984 - MLT1L LTR MaLR 0 615 443 323 258 75 0 chr2 5786445 5786538 -244901316 - MER45A DNA AcHobo -53 125 26 313 356 31 6 chr2 5786615 5786775 -244901079 + MIR SINE MIR 48 211 -51 2408 68 3 3 chr2 5787122 5787433 -244900421 + AluY SINE Alu 1 311 0 1637 161 39 86 chr2 5787451 5787835 -244900019 + MER47A DNA MER2_type 1 366 0 2129 110 0 0 chr2 5788623 5788931 -244898923 - AluY SINE Alu 0 308 1 183 328 16 64 chr2 5790030 5790155 -244897699 - L3 LINE CR1 -1 1576 1458 33 0 0 0 chr2 5792499 5792532 -244895322 + AT_rich Low_complexity Low_complexity 1 33 0 182 333 48 0 chr2 5792667 5792730 -244895124 - MIR SINE MIR -119 143 78 2418 238 67 12 chr2 5792976 5793573 -244894281 - LTR27 LTR ERV1 0 636 7 1652 171 14 73 chr2 5793746 5794115 -244893739 - MLT1B LTR MaLR 0 390 44 278 250 0 0 chr2 5794628 5794688 -244893166 + MIR SINE MIR 87 146 -62 279 314 69 10 chr2 5794820 5794922 -244892932 - MIR SINE MIR -48 214 107 23 0 0 0 chr2 5796725 5796748 -244891106 + AT_rich Low_complexity Low_complexity 1 23 0 199 338 0 15 chr2 5798491 5798559 -244889295 - MIR SINE MIR -76 186 120 294 274 96 37 chr2 5800882 5801017 -244886837 + MIR3 SINE MIR 63 205 -3 333 315 19 9 chr2 5801201 5801309 -244886545 + L2 LINE L2 3154 3262 -51 241 47 156 16 chr2 5801362 5801426 -244886428 + (TTAAA)n Simple_repeat Simple_repeat 4 76 0 327 191 0 32 chr2 5801726 5801852 -244886002 + GA-rich Low_complexity Low_complexity 3 124 0 1465 191 28 3 chr2 5801875 5802158 -244885696 + AluJo SINE Alu 9 298 -14 809 51 5 82 chr2 5802193 5802388 -244885466 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 276 163 0 50 chr2 5802372 5802452 -244885402 + GA-rich Low_complexity Low_complexity 3 78 0 * 480 191 40 0 chr2 5802600 5802726 -244885128 + GA-rich Low_complexity Low_complexity 4 134 0 2093 122 0 7 chr2 5802848 5803143 -244884711 + AluSx SINE Alu 1 293 -19 5816 245 31 37 chr2 5803545 5804664 -244883190 + L1M4 LINE L1 20 1524 -5121 2078 131 0 0 chr2 5804664 5804966 -244882888 + AluSx SINE Alu 1 302 0 5816 245 31 37 chr2 5804966 5805610 -244882244 + L1M4 LINE L1 1524 2171 -4474 4153 227 112 68 chr2 5805640 5807072 -244880782 + L1MDa LINE L1 35 1542 -4998 1969 172 143 8 chr2 5807072 5807449 -244880405 - MSTA LTR MaLR 0 428 1 4153 227 112 68 chr2 5807449 5807565 -244880289 + L1MDa LINE L1 1542 1651 -4889 2572 267 56 49 chr2 5807596 5809294 -244878560 - L1PA12 LINE L1 -5608 1973 1 343 167 61 0 chr2 5809393 5809459 -244878395 - L1MDa LINE L1 -6436 104 35 23 0 0 0 chr2 5811342 5811365 -244876489 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 5811635 5811657 -244876197 + AT_rich Low_complexity Low_complexity 1 22 0 657 298 38 78 chr2 5813071 5813417 -244874437 + MLT1H LTR MaLR 23 354 -195 4666 215 42 82 chr2 5815331 5816839 -244871015 - Charlie1a DNA MER1_type -1 1454 6 200 306 145 40 chr2 5817978 5818102 -244869752 + L2 LINE L2 3136 3272 0 2185 253 54 19 chr2 5818401 5818904 -244868950 - L1 LINE L1 -2580 3566 3082 2225 147 86 18 chr2 5818904 5819299 -244868555 - MSTB LTR MaLR -4 422 1 2185 253 54 19 chr2 5819299 5819796 -244868058 - L1 LINE L1 -3064 3082 2498 1681 239 121 63 chr2 5819793 5820380 -244867474 - L1M4b LINE L1 -6219 640 20 * 378 335 107 5 chr2 5822339 5822545 -244865309 + MIR SINE MIR 31 257 -5 705 73 0 0 chr2 5823237 5823333 -244864521 + (TA)n Simple_repeat Simple_repeat 2 97 0 234 0 0 0 chr2 5823573 5823599 -244864255 + (TA)n Simple_repeat Simple_repeat 2 27 0 387 317 42 7 chr2 5824556 5824698 -244863156 + MIR SINE MIR 7 153 -109 2249 110 3 7 chr2 5828248 5828557 -244859297 - AluSq SINE Alu -5 308 1 693 290 157 34 chr2 5830023 5830430 -244857424 - LTR16B LTR ERVL -1 463 7 2384 138 119 8 chr2 5832877 5833262 -244854592 - MSTA LTR MaLR 0 428 1 439 331 82 5 chr2 5833433 5833617 -244854237 - L2 LINE L2 -163 3109 2912 259 150 33 0 chr2 5833642 5833702 -244854152 + CT-rich Low_complexity Low_complexity 3 64 0 1910 197 110 22 chr2 5833710 5834212 -244853642 - LTR10B LTR ERV1 -1 546 1 270 253 179 0 chr2 5834342 5834437 -244853417 - MLT1D LTR MaLR 0 505 394 370 313 96 34 chr2 5834762 5835314 -244852540 - L1ME3A LINE L1 -239 5931 5346 27 29 0 0 chr2 5835492 5835526 -244852328 + AT_rich Low_complexity Low_complexity 1 34 0 426 302 101 28 chr2 5835554 5835842 -244852012 - L1ME3A LINE L1 -1108 5038 4730 2260 113 0 0 chr2 5835868 5836169 -244851685 - AluSq SINE Alu -12 301 1 227 286 160 45 chr2 5836266 5836467 -244851387 + MIR SINE MIR 36 256 -6 21 0 0 0 chr2 5836542 5836563 -244851291 + AT_rich Low_complexity Low_complexity 1 21 0 202 321 136 31 chr2 5837110 5837272 -244850582 - MIR SINE MIR -6 256 78 1401 208 71 75 chr2 5837275 5837742 -244850112 - MLT1C LTR MaLR -2 465 1 345 47 0 0 chr2 5837753 5837796 -244850058 + (TG)n Simple_repeat Simple_repeat 2 44 0 398 336 39 50 chr2 5837960 5838219 -244849635 + L3 LINE CR1 836 1091 -486 225 245 43 43 chr2 5838219 5838313 -244849541 - MLT1J1 LTR MaLR 0 446 353 1585 211 38 30 chr2 5838324 5838694 -244849160 + MLT1A2 LTR MaLR 2 374 0 2494 67 3 0 chr2 5840026 5840326 -244847528 - AluY SINE Alu -10 301 1 262 279 38 13 chr2 5840736 5840815 -244847039 - MLT1G LTR MaLR -503 87 7 954 151 0 0 chr2 5841089 5841241 -244846613 + L1PBa LINE L1 3 154 -6709 430 176 12 0 chr2 5841307 5841392 -244846462 + L1PBa LINE L1 856 941 -5922 7316 208 17 3 chr2 5841484 5843611 -244844243 + L1PBa LINE L1 177 1644 -5219 227 88 29 0 chr2 5843611 5843645 -244844209 + MSTA LTR MaLR 1 35 -393 203 274 96 59 chr2 5844121 5844256 -244843598 + MER5B DNA MER1_type 5 144 -34 286 214 87 29 chr2 5844141 5844244 -244843610 - MER5A DNA MER1_type -22 167 59 2321 100 0 0 chr2 5844469 5844770 -244843084 + AluSx SINE Alu 1 301 -11 2807 145 59 11 chr2 5846579 5847104 -244840750 + Tigger3(Golem) DNA MER2_type 2478 3027 -2 328 202 16 57 chr2 5847104 5847227 -244840627 - Charlie2 DNA MER1_type -507 2355 2238 523 297 72 14 chr2 5847323 5847532 -244840322 - Charlie2 DNA MER1_type -2614 248 28 1877 207 71 7 chr2 5848000 5848405 -244839449 + MLT2C2 LTR ERVL 3 534 -20 361 244 47 0 chr2 5848415 5848501 -244839353 - L1MC4 LINE L1 -1339 6703 6614 302 183 0 17 chr2 5848472 5848532 -244839322 - L1MCa LINE L1 -4362 2064 2006 * 401 326 102 5 chr2 5848589 5848785 -244839069 + MIR SINE MIR 23 237 -25 265 137 63 105 chr2 5849356 5849451 -244838403 + L2 LINE L2 3117 3207 -106 344 229 0 0 chr2 5849929 5849999 -244837855 + MIR SINE MIR 86 155 -107 286 174 0 10 chr2 5850007 5850076 -244837778 - MLT2D LTR ERVL -2 412 367 738 209 10 19 chr2 5850076 5850494 -244837360 + (CATATA)n Simple_repeat Simple_repeat 1 414 0 225 231 0 0 chr2 5850494 5850546 -244837308 - L1MC4 LINE L1 -1343 6699 6648 585 173 27 0 chr2 5850548 5850698 -244837156 + (CATATA)n Simple_repeat Simple_repeat 4 157 0 2088 189 16 7 chr2 5850698 5851080 -244836774 - MLT2D LTR ERVL -40 480 1 1191 231 19 68 chr2 5852611 5853087 -244834767 + L1MA9 LINE L1 5836 6282 -30 281 26 26 0 chr2 5853158 5853196 -244834658 + (CA)n Simple_repeat Simple_repeat 2 40 0 1189 282 61 22 chr2 5853772 5854261 -244833593 - MLT1H LTR MaLR -41 508 1 356 271 62 8 chr2 5854706 5854835 -244833019 - MLT1I LTR MaLR 0 409 274 598 215 66 0 chr2 5854935 5855056 -244832798 + FLAM_A SINE Alu 1 129 -4 180 366 43 0 chr2 5855720 5855813 -244832041 - MIR SINE MIR -59 203 107 256 196 0 0 chr2 5857239 5857285 -244830569 + L2 LINE L2 3261 3306 -7 290 326 120 23 chr2 5857300 5857611 -244830243 - L2 LINE L2 -2 3270 2871 183 266 0 0 chr2 5857621 5857685 -244830169 + (TTCA)n Simple_repeat Simple_repeat 3 66 0 3153 236 74 10 chr2 5857885 5859120 -244828734 + Charlie1a DNA MER1_type 1 1384 -71 537 275 80 40 chr2 5859388 5859463 -244828391 - MIR SINE MIR -29 233 162 2774 110 6 3 chr2 5859463 5859826 -244828028 + THE1B LTR MaLR 1 364 0 537 275 80 40 chr2 5859826 5859950 -244827904 - MIR SINE MIR -100 162 26 193 239 0 0 chr2 5860827 5860873 -244826981 + MER5A DNA MER1_type 122 167 -22 1376 231 21 43 chr2 5861722 5862095 -244825759 + MLT1A1 LTR MaLR 1 365 0 331 318 18 17 chr2 5862691 5862890 -244824964 - L1M4 LINE L1 -1044 5102 4903 339 254 114 71 chr2 5862933 5863284 -244824570 - L1M4 LINE L1 -1316 4830 4465 1031 145 6 0 chr2 5863320 5863486 -244824368 - AluSg/x SINE Alu -5 307 141 304 291 54 51 chr2 5863491 5863786 -244824068 - L1M4 LINE L1 -1730 4416 4121 851 179 118 5 chr2 5863787 5863999 -244823855 + MER44D DNA MER2_type 2 507 -102 2687 151 31 7 chr2 5863999 5864415 -244823439 - MSTA LTR MaLR -2 426 1 982 154 6 0 chr2 5864419 5864575 -244823279 + AluSg/x SINE Alu 145 301 -9 1715 131 95 0 chr2 5864781 5865064 -244822790 + AluSx SINE Alu 1 310 -2 283 146 45 22 chr2 5865699 5865788 -244822066 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 380 301 70 7 chr2 5866416 5866559 -244821295 + MER5B DNA MER1_type 1 152 -26 189 0 0 0 chr2 5866714 5866735 -244821119 + (T)n Simple_repeat Simple_repeat 1 21 0 207 243 29 0 chr2 5867218 5867288 -244820566 + (TA)n Simple_repeat Simple_repeat 2 73 0 241 321 89 0 chr2 5867477 5867589 -244820265 - MIR SINE MIR -70 192 71 356 47 0 0 chr2 5869162 5869205 -244818649 + (TG)n Simple_repeat Simple_repeat 2 44 0 210 338 15 0 chr2 5870069 5870137 -244817717 + MIR3 SINE MIR 137 205 -3 1026 194 10 5 chr2 5870261 5870457 -244817397 - MLT2C1 LTR ERVL -54 343 147 1297 214 143 31 chr2 5870460 5870816 -244817038 - MSTD LTR MaLR 0 396 1 1256 239 49 3 chr2 5870816 5871121 -244816733 - MSTD-int LTR MaLR 0 1735 1417 1547 163 71 37 chr2 5871121 5871447 -244816407 + THE1C LTR MaLR 1 337 -38 3467 249 114 37 chr2 5871565 5872756 -244815098 - MSTD-int LTR MaLR -369 1282 1 1463 236 87 47 chr2 5872756 5873137 -244814717 - MSTD LTR MaLR 0 396 1 877 140 7 0 chr2 5873137 5873280 -244814574 - MLT2C2 LTR ERVL -316 148 5 334 222 13 6 chr2 5874109 5874267 -244813587 + GA-rich Low_complexity Low_complexity 1 159 0 2158 130 0 0 chr2 5874526 5874833 -244813021 + AluSx SINE Alu 5 311 -1 636 269 47 96 chr2 5875150 5875537 -244812317 + LTR16B LTR ERVL 84 451 -13 477 278 28 0 chr2 5875543 5875651 -244812203 - MER81 DNA DNA -2 112 2 219 308 187 19 chr2 5876102 5876209 -244811645 - L2 LINE L2 -1 3271 3147 210 128 0 0 chr2 5876282 5876321 -244811533 + (TTA)n Simple_repeat Simple_repeat 3 41 0 224 399 35 35 chr2 5876353 5876556 -244811298 - L2 LINE L2 -244 3028 2826 1097 203 22 22 chr2 5876589 5876821 -244811033 + MLT1A1 LTR MaLR 1 232 -133 2011 184 49 0 chr2 5876827 5877175 -244810679 - MLT1A1 LTR MaLR 0 365 1 196 221 52 91 chr2 5878074 5878151 -244809703 - MIR SINE MIR -108 154 81 384 269 99 41 chr2 5878534 5878705 -244809149 + MLT1J2 LTR MaLR 270 450 0 275 360 124 22 chr2 5878719 5878994 -244808860 + L2 LINE L2 2571 2873 -441 2328 63 11 0 chr2 5879081 5879367 -244808487 - AluY SINE Alu -22 289 1 2895 200 107 74 chr2 5879367 5880288 -244807566 + MER63D DNA MER1_type 10 971 -90 1594 164 20 49 chr2 5880288 5880593 -244807261 + AluJb SINE Alu 1 296 -16 2895 200 107 74 chr2 5880593 5880685 -244807169 + MER63D DNA MER1_type 971 1059 -2 207 378 72 9 chr2 5880702 5880813 -244807041 + L2 LINE L2 2948 3065 -207 1637 234 121 59 chr2 5881510 5882189 -244805665 + MER50 LTR ERV1 14 734 0 245 414 21 21 chr2 5882514 5882705 -244805149 + MIR SINE MIR 47 237 -25 24 0 0 0 chr2 5882797 5882821 -244805033 + AT_rich Low_complexity Low_complexity 1 24 0 770 230 59 59 chr2 5882966 5883188 -244804666 + MIR SINE MIR 15 236 -26 2627 119 11 16 chr2 5883325 5883702 -244804152 - THE1C LTR MaLR 0 375 1 922 202 62 31 chr2 5884116 5884373 -244803481 + MER97a DNA MER1_type? 47 311 -583 3308 133 16 4 chr2 5884400 5884913 -244802941 - L1PA16 LINE L1 -140 6026 5508 9475 86 5 13 chr2 5885021 5886304 -244801550 - L1P3 LINE L1 -5188 1273 2 222 182 26 13 chr2 5886637 5886714 -244801140 + (TG)n Simple_repeat Simple_repeat 1 78 0 22 35 0 0 chr2 5887154 5887183 -244800671 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 5887227 5887249 -244800605 + AT_rich Low_complexity Low_complexity 1 22 0 726 155 17 28 chr2 5888269 5888450 -244799404 + GA-rich Low_complexity Low_complexity 2 180 0 22 35 0 0 chr2 5890505 5890534 -244797320 + AT_rich Low_complexity Low_complexity 1 29 0 1422 266 113 28 chr2 5891801 5892597 -244795257 + HAL1 LINE L1 1028 1891 -616 451 245 113 34 chr2 5893476 5893741 -244794113 - L1ME4a LINE L1 -219 5902 5617 255 237 55 48 chr2 5893892 5894011 -244793843 - L1ME4a LINE L1 -929 5404 5299 200 362 140 9 chr2 5894188 5894409 -244793445 + L2 LINE L2 2436 2685 -629 531 235 75 30 chr2 5894532 5894959 -244792895 + MLT1C LTR MaLR 6 467 0 3096 86 7 18 chr2 5895063 5895518 -244792336 - L1PA13 LINE L1 -4 6159 5710 204 233 0 0 chr2 5895995 5896038 -244791816 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 456 277 119 45 chr2 5896094 5896672 -244791182 - L1ME4a LINE L1 -238 5883 5263 802 165 170 6 chr2 5896745 5896927 -244790927 - Tigger5 DNA MER2_type 0 2323 2112 1040 257 55 3 chr2 5896932 5897224 -244790630 - Tigger5 DNA MER2_type -2016 307 1 1881 110 18 18 chr2 5901035 5901337 -244786517 - AluSg SINE Alu 0 302 1 2020 135 0 0 chr2 5901626 5901929 -244785925 - AluSx SINE Alu 0 303 1 28 0 0 0 chr2 5902497 5902525 -244785329 + AT_rich Low_complexity Low_complexity 1 28 0 851 151 20 0 chr2 5904512 5904664 -244783190 + MLT2D LTR ERVL 1 155 -259 229 143 143 18 chr2 5904731 5904787 -244783067 - MLT2C2 LTR ERVL -285 179 117 * 1005 209 34 34 chr2 5904751 5905019 -244782835 + MLT2D LTR ERVL 145 412 -2 1159 221 130 54 chr2 5905069 5905519 -244782335 + MLT2B1 LTR ERVL 1 492 -28 324 0 0 0 chr2 5905519 5905555 -244782299 + (CA)n Simple_repeat Simple_repeat 2 37 0 1159 221 130 54 chr2 5905555 5905587 -244782267 + MLT2B1 LTR ERVL 492 520 0 188 358 59 64 chr2 5905631 5905835 -244782019 - L2 LINE L2 -113 3159 2957 2438 152 11 2 chr2 5905969 5906410 -244781444 - L1PB4 LINE L1 -318 5838 5394 1475 163 50 50 chr2 5906715 5907040 -244780814 - AluJo SINE Alu 0 327 3 205 319 87 0 chr2 5908191 5908260 -244779594 + MER91C DNA MER1_type 48 122 -18 915 202 0 22 chr2 5908305 5908483 -244779371 + AluJb SINE Alu 127 300 -12 346 247 103 0 chr2 5909159 5909256 -244778598 - L2 LINE L2 -12 3260 3154 688 315 94 44 chr2 5910317 5911310 -244776544 - L2 LINE L2 -16 3297 2191 951 43 0 0 chr2 5911383 5911500 -244776354 + L1PA13 LINE L1 6041 6157 -6 1572 210 127 50 chr2 5911988 5912469 -244775385 + MLT2B1 LTR ERVL 1 518 -2 408 359 95 9 chr2 5915250 5915481 -244772373 + L1ME3A LINE L1 5549 5799 -2009 336 253 33 22 chr2 5916090 5916181 -244771673 - MIR SINE MIR -28 234 143 355 223 268 0 chr2 5916525 5916637 -244771217 - MIR SINE MIR -115 147 6 644 280 82 0 chr2 5916842 5917049 -244770805 + MER58A DNA MER1_type 1 224 0 319 115 0 0 chr2 5917573 5917625 -244770229 + MADE1 DNA Mariner 29 80 0 290 154 92 0 chr2 5918143 5918208 -244769646 + MER67A LTR ERV1 18 88 -455 1363 251 46 12 chr2 5918264 5918679 -244769175 + MER67A LTR ERV1 84 512 -31 257 303 50 10 chr2 5918804 5918903 -244768951 - MIR SINE MIR -59 203 101 345 390 39 18 chr2 5919332 5919614 -244768240 - L3 LINE CR1 -554 1023 736 456 289 70 18 chr2 5920344 5920686 -244767168 + L1M4 LINE L1 2201 2560 -3586 631 267 70 23 chr2 5920702 5920960 -244766894 + L1ME3A LINE L1 5859 6128 -42 625 316 201 5 chr2 5921159 5921533 -244766321 + L2 LINE L2 2867 3313 0 612 285 117 61 chr2 5922750 5923076 -244764778 + L2 LINE L2 2970 3313 0 26 0 0 0 chr2 5923166 5923192 -244764662 + AT_rich Low_complexity Low_complexity 1 26 0 276 280 75 19 chr2 5923265 5923372 -244764482 - MIR SINE MIR -142 120 8 420 37 0 0 chr2 5924046 5924100 -244763754 + (CA)n Simple_repeat Simple_repeat 2 55 0 375 368 0 0 chr2 5925094 5925219 -244762635 + MIR SINE MIR 22 146 -62 736 178 0 15 chr2 5925426 5925561 -244762293 + FLAM_C SINE Alu 1 133 0 497 156 33 25 chr2 5925566 5925688 -244762166 - MER53 DNA DNA -12 177 55 183 278 130 99 chr2 5926627 5926789 -244761065 + L3b LINE CR1 1337 1503 -80 228 364 78 31 chr2 5926835 5926964 -244760890 + MIR3 SINE MIR 11 145 -63 374 318 94 15 chr2 5927129 5927330 -244760524 + L3 LINE CR1 1361 1577 0 186 103 0 0 chr2 5927379 5927408 -244760446 + (TTTTTG)n Simple_repeat Simple_repeat 6 34 0 303 257 59 65 chr2 5927643 5927834 -244760020 + MIR SINE MIR 5 196 -65 183 80 0 0 chr2 5929468 5929493 -244758361 + (GA)n Simple_repeat Simple_repeat 2 26 0 182 344 0 0 chr2 5929678 5929742 -244758112 - MIR SINE MIR -129 133 70 612 169 92 23 chr2 5929745 5929875 -244757979 - MSTA LTR MaLR -234 141 3 322 345 31 16 chr2 5929896 5930215 -244757639 + L1M4 LINE L1 3834 4157 -1989 22 0 0 0 chr2 5930281 5930303 -244757551 + AT_rich Low_complexity Low_complexity 1 22 0 225 275 12 12 chr2 5930335 5930415 -244757439 - LTR33A LTR ERVL 0 523 444 575 297 40 18 chr2 5930419 5930695 -244757159 - MLT1C LTR MaLR 0 467 186 705 279 8 8 chr2 5930820 5931074 -244756780 - MLT1C LTR MaLR -213 254 1 25 0 0 0 chr2 5931475 5931500 -244756354 + AT_rich Low_complexity Low_complexity 1 25 0 264 329 32 4 chr2 5931649 5931895 -244755959 + L1ME3A LINE L1 5695 5947 -223 417 278 115 14 chr2 5933572 5933781 -244754073 - LTR16A LTR ERVL -14 436 207 767 285 119 34 chr2 5933860 5934576 -244753278 + HAL1 LINE L1 979 1755 -752 1649 162 72 57 chr2 5934648 5935067 -244752787 - MSTB1 LTR MaLR -5 427 3 274 262 38 93 chr2 5935156 5935446 -244752408 + HAL1 LINE L1 1936 2209 -298 445 216 93 37 chr2 5935768 5935930 -244751924 + MLT1D LTR MaLR 22 192 -313 816 168 120 29 chr2 5935976 5936184 -244751670 + MLT1D LTR MaLR 279 505 0 295 228 114 74 chr2 5936535 5936684 -244751170 + MIR SINE MIR 19 173 -89 1827 166 3 0 chr2 5937230 5937513 -244750341 - AluJb SINE Alu -23 289 6 484 285 15 0 chr2 5937710 5937847 -244750007 + L3 LINE CR1 1201 1339 -238 305 328 25 25 chr2 5938238 5938360 -244749494 - MER5A DNA MER1_type -12 177 56 216 200 0 0 chr2 5938610 5938660 -244749194 + (TG)n Simple_repeat Simple_repeat 2 51 0 1399 273 22 0 chr2 5938675 5939185 -244748669 + L1M4 LINE L1 2110 2630 -3516 397 169 34 59 chr2 5939360 5939478 -244748376 - LTR67 LTR ERVL 0 557 443 2485 46 0 0 chr2 5941006 5941312 -244746542 - L1PA2 LINE L1 -7 6148 5843 304 87 0 0 chr2 5941699 5941745 -244746109 + MADE1 DNA Mariner 5 50 -30 921 160 30 5 chr2 5941753 5942388 -244745466 + (TCTA)n Simple_repeat Simple_repeat 1 651 0 402 21 0 0 chr2 5942409 5942456 -244745398 + (TG)n Simple_repeat Simple_repeat 2 48 0 271 338 163 0 chr2 5943010 5943170 -244744684 + MIR SINE MIR 77 262 0 21 36 0 0 chr2 5943454 5943482 -244744372 + AT_rich Low_complexity Low_complexity 1 28 0 295 312 22 14 chr2 5943603 5943741 -244744113 + MLT1J2 LTR MaLR 46 184 -266 28 48 0 0 chr2 5945508 5945550 -244742304 + AT_rich Low_complexity Low_complexity 1 42 0 6197 119 67 2 chr2 5945892 5946989 -244740865 - L1PBa LINE L1 -4016 2847 1680 1274 103 0 0 chr2 5947089 5947263 -244740591 + AluY SINE Alu 138 311 0 1490 134 0 0 chr2 5947620 5947836 -244740018 - AluY SINE Alu -13 298 83 983 192 0 0 chr2 5949327 5949494 -244738360 - FRAM SINE Alu -9 167 1 329 371 102 15 chr2 5949840 5950045 -244737809 + MIR SINE MIR 40 262 0 274 328 123 0 chr2 5950528 5950650 -244737204 - MIR SINE MIR -76 186 50 228 238 0 48 chr2 5952090 5952153 -244735701 + GA-rich Low_complexity Low_complexity 3 62 0 6320 196 48 11 chr2 5952554 5953679 -244734175 + L1 LINE L1 3180 4377 -1769 659 289 24 14 chr2 5953679 5953887 -244733967 - MER6B DNA MER2_type 0 210 1 6320 196 48 11 chr2 5953887 5954268 -244733586 + L1 LINE L1 4377 4742 -1404 5338 253 100 58 chr2 5954280 5956393 -244731461 - L1MDa LINE L1 -4336 2204 3 23 68 0 0 chr2 5956598 5956642 -244731212 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr2 5957075 5957101 -244730753 + AT_rich Low_complexity Low_complexity 1 26 0 431 272 109 22 chr2 5957961 5958145 -244729709 - MIR SINE MIR -15 247 48 421 288 14 63 chr2 5959660 5959882 -244727972 - L2 LINE L2 0 3313 3103 582 159 0 65 chr2 5959909 5960016 -244727838 + AluSq/x SINE Alu 14 113 -199 1054 73 15 0 chr2 5960016 5960152 -244727702 - THE1C LTR MaLR 0 375 238 938 243 136 20 chr2 5960164 5960604 -244727250 - L1M4 LINE L1 -2098 4048 3558 1262 114 15 0 chr2 5960607 5960808 -244727046 - L1MA3 LINE L1 0 6305 6102 5017 210 29 66 chr2 5960809 5962601 -244725253 - L1 LINE L1 -827 6738 5115 2177 116 3 0 chr2 5962601 5962902 -244724952 + AluSp SINE Alu 3 304 -9 5017 210 29 66 chr2 5962902 5963208 -244724646 - L1 LINE L1 -2450 5115 4799 956 93 8 0 chr2 5963212 5963341 -244724513 - AluSc SINE Alu -15 294 165 850 219 60 17 chr2 5963341 5963643 -244724211 - L1 LINE L1 -2759 4806 4492 6883 75 1 4 chr2 5963772 5964997 -244722857 - L1PA7 LINE L1 -29 6125 4906 14251 183 36 9 chr2 5965002 5967552 -244720302 - L1 LINE L1 -4936 2629 11 452 284 21 76 chr2 5967643 5968172 -244719682 - L1M4 LINE L1 -2696 3450 2951 26 50 0 0 chr2 5968862 5968902 -244718952 + AT_rich Low_complexity Low_complexity 1 40 0 206 264 0 0 chr2 5969985 5970038 -244717816 + L2 LINE L2 3203 3255 -17 256 279 67 19 chr2 5971379 5971483 -244716371 - MIR SINE MIR -64 144 36 395 295 26 58 chr2 5971484 5971640 -244716214 + MIR SINE MIR 56 206 -56 241 418 112 16 chr2 5971743 5971992 -244715862 - L2 LINE L2 -40 3232 2960 1701 252 89 29 chr2 5972096 5972755 -244715099 - L1ME1 LINE L1 -114 6550 5852 194 193 18 0 chr2 5972755 5972812 -244715042 + (TA)n Simple_repeat Simple_repeat 1 58 0 1957 260 131 121 chr2 5972822 5973494 -244714360 - L1ME1 LINE L1 -797 5847 5183 696 213 0 0 chr2 5973494 5973616 -244714238 + FAM SINE Alu 21 142 -43 1957 260 131 121 chr2 5973616 5974873 -244712981 - L1ME1 LINE L1 -1461 5183 3778 1146 237 28 59 chr2 5974889 5975244 -244712610 + MLT1A1 LTR MaLR 1 344 -21 614 244 0 0 chr2 5975242 5975361 -244712493 - MLT1A1 LTR MaLR -246 119 1 * 1086 242 93 8 chr2 5975430 5975645 -244712209 - L1ME1 LINE L1 -2884 3760 3565 273 57 0 0 chr2 5975645 5975680 -244712174 + (TG)n Simple_repeat Simple_repeat 2 36 0 1086 242 93 8 chr2 5975680 5975968 -244711886 - L1ME1 LINE L1 -3079 3565 3214 297 227 78 50 chr2 5975984 5976125 -244711729 - L1ME1 LINE L1 -6381 161 17 189 74 0 0 chr2 5977038 5977065 -244710789 + (TAAAA)n Simple_repeat Simple_repeat 1 27 0 1025 213 115 20 chr2 5977387 5977640 -244710214 + AluJo SINE Alu 1 277 -35 1965 138 7 3 chr2 5977658 5977949 -244709905 + AluSx SINE Alu 1 292 -20 36 40 0 0 chr2 5977949 5977999 -244709855 + AT_rich Low_complexity Low_complexity 1 50 0 222 311 27 14 chr2 5979148 5979222 -244708632 - MIR SINE MIR -150 112 38 731 160 33 0 chr2 5979349 5979499 -244708355 + BC200 scRNA scRNA 1 155 -45 180 239 68 45 chr2 5980774 5980862 -244706992 - MIR SINE MIR -103 105 16 27 73 0 0 chr2 5980952 5981007 -244706847 + AT_rich Low_complexity Low_complexity 1 55 0 278 325 71 26 chr2 5982544 5982698 -244705156 + L2 LINE L2 2914 3074 -198 217 354 25 0 chr2 5984841 5984920 -244702934 - L2 LINE L2 -5 3267 3187 487 324 62 29 chr2 5985800 5986041 -244701813 - MIR SINE MIR -11 251 3 562 311 42 33 chr2 5987556 5987768 -244700086 + MIR SINE MIR 46 259 -3 234 373 49 95 chr2 5987890 5988153 -244699701 - L2 LINE L2 -6 3266 3016 258 256 35 35 chr2 5988754 5988840 -244699014 + L2 LINE L2 3002 3087 -185 21 0 0 0 chr2 5988938 5988959 -244698895 + AT_rich Low_complexity Low_complexity 1 21 0 297 211 203 24 chr2 5990193 5990316 -244697538 - MER5A DNA MER1_type -2 187 43 284 269 120 0 chr2 5991540 5991648 -244696206 + L1ME LINE L1 5561 5681 -440 267 294 65 0 chr2 5991932 5992024 -244695830 + MIR SINE MIR 124 221 -41 230 258 32 0 chr2 5992848 5992910 -244694944 + CT-rich Low_complexity Low_complexity 1 64 0 465 34 0 0 chr2 5993376 5993435 -244694419 + (TG)n Simple_repeat Simple_repeat 1 59 0 1896 149 0 34 chr2 5993546 5993868 -244693986 + AluSx SINE Alu 1 311 -1 5914 213 51 19 chr2 5994759 5995161 -244692693 + L1MC1 LINE L1 4005 4393 -1940 1597 231 72 20 chr2 5995161 5995508 -244692346 - MLT1A1 LTR MaLR 0 365 1 5914 213 51 19 chr2 5995508 5996193 -244691661 + L1MC1 LINE L1 4393 5055 -1278 2012 131 34 0 chr2 5996193 5996484 -244691370 - AluSx SINE Alu -11 301 1 5914 213 51 19 chr2 5996484 5997670 -244690184 + L1MC1 LINE L1 5055 6333 0 337 281 75 50 chr2 5998002 5998162 -244689692 + MIR SINE MIR 87 250 -12 1604 378 25 5 chr2 5998167 5998535 -244689319 + THE1C LTR MaLR 1 375 0 258 338 45 8 chr2 5999024 5999157 -244688697 - MIR SINE MIR -74 188 51 320 243 117 10 chr2 5999844 5999947 -244687907 + MIR SINE MIR 30 143 -65 198 0 0 0 chr2 6000415 6000437 -244687417 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 198 250 0 0 chr2 6001878 6001922 -244685932 - L3b LINE CR1 -8 1575 1532 246 309 24 67 chr2 6001923 6002088 -244685766 + MER117 DNA MER1_type 2 159 -38 314 228 32 65 chr2 6002210 6002333 -244685521 - MLT1F1 LTR MaLR -6 561 443 281 266 101 15 chr2 6002329 6002512 -244685342 - MLT1H1 LTR MaLR -325 230 1 * 186 302 0 0 chr2 6003007 6003060 -244684794 - MIR3 SINE MIR -43 165 113 1231 111 6 18 chr2 6003554 6003725 -244684129 + AluSq SINE Alu 12 180 -133 1264 67 0 0 chr2 6003826 6003976 -244683878 - AluSq/x SINE Alu -162 150 1 325 371 51 31 chr2 6004447 6004800 -244683054 + L3 LINE CR1 666 1025 -552 250 333 0 46 chr2 6004858 6004966 -244682888 + L3 LINE CR1 1155 1257 -320 191 36 36 0 chr2 6005732 6005760 -244682094 + (TG)n Simple_repeat Simple_repeat 1 29 0 331 343 43 60 chr2 6006229 6006462 -244681392 + L3 LINE CR1 1141 1369 -208 241 244 0 0 chr2 6007015 6007069 -244680785 - MIR SINE MIR -84 124 71 232 299 13 13 chr2 6007339 6007416 -244680438 + MLT1E LTR MaLR 209 285 -308 185 290 93 28 chr2 6007464 6007571 -244680283 - MIR SINE MIR -63 145 32 311 276 11 0 chr2 6007911 6007998 -244679856 - MIR SINE MIR -168 94 7 25 51 0 0 chr2 6008563 6008602 -244679252 + AT_rich Low_complexity Low_complexity 1 39 0 454 321 63 66 chr2 6008883 6009279 -244678575 + L2 LINE L2 2850 3244 -28 2183 210 8 32 chr2 6010325 6010796 -244677058 + MLT1C LTR MaLR 8 467 0 1207 205 101 14 chr2 6012141 6012419 -244675435 + MER58B DNA MER1_type 36 337 -4 28 29 0 0 chr2 6012656 6012691 -244675163 + AT_rich Low_complexity Low_complexity 1 35 0 1118 30 8 8 chr2 6012791 6012922 -244674932 - AluY SINE Alu -180 131 1 273 326 56 41 chr2 6013892 6014088 -244673766 + MIR SINE MIR 35 233 -29 350 350 64 6 chr2 6014117 6014274 -244673580 - MIR SINE MIR -77 185 20 480 285 158 13 chr2 6014281 6014439 -244673415 - MER5A DNA MER1_type 0 189 9 223 93 0 74 chr2 6014535 6014589 -244673265 + (GGAGAA)n Simple_repeat Simple_repeat 2 51 0 208 315 56 11 chr2 6014960 6015049 -244672805 + MIR SINE MIR 118 210 -52 2047 213 115 14 chr2 6015049 6015552 -244672302 - MLT2B3 LTR ERVL 0 554 1 652 264 40 40 chr2 6015674 6015914 -244671940 - MIR SINE MIR -11 251 16 1946 133 96 37 chr2 6016497 6016851 -244671003 - THE1C LTR MaLR 0 375 1 1797 187 41 44 chr2 6016966 6017330 -244670524 + MLT1A1 LTR MaLR 3 365 0 225 241 24 60 chr2 6018316 6018399 -244669455 - MIR3 SINE MIR -11 197 118 260 250 80 10 chr2 6018449 6018549 -244669305 + MIR SINE MIR 81 187 -75 232 311 10 48 chr2 6018547 6018650 -244669204 + L2 LINE L2 3215 3313 0 * 206 306 106 12 chr2 6018706 6018791 -244669063 - MIR3 SINE MIR -102 106 14 372 271 37 0 chr2 6019893 6020000 -244667854 + MER94 DNA DNA 19 129 -5 317 125 0 83 chr2 6020277 6020349 -244667505 + L1PA16 LINE L1 6095 6160 -6 207 0 0 0 chr2 6020668 6020691 -244667163 + (TG)n Simple_repeat Simple_repeat 1 23 0 1959 135 26 53 chr2 6020992 6021369 -244666485 - THE1C LTR MaLR -8 367 1 1361 212 50 32 chr2 6021386 6021763 -244666091 + L1MC4 LINE L1 7044 7427 -615 787 215 10 40 chr2 6021757 6021957 -244665897 - L1MC4 LINE L1 -961 7081 6888 * 287 276 48 0 chr2 6022075 6022180 -244665674 - MIR3 SINE MIR -9 199 90 252 86 0 0 chr2 6022981 6023016 -244664838 + (T)n Simple_repeat Simple_repeat 1 35 0 2300 103 0 0 chr2 6023834 6024135 -244663719 + AluY SINE Alu 1 301 -10 2977 96 8 0 chr2 6024267 6024663 -244663191 - MLT2A2 LTR ERVL -53 400 2 216 318 95 84 chr2 6025226 6025405 -244662449 - L2 LINE L2 -36 3236 3056 369 323 43 59 chr2 6025628 6025890 -244661964 + MIR SINE MIR 9 261 -1 41 58 0 0 chr2 6025978 6026047 -244661807 + AT_rich Low_complexity Low_complexity 1 69 0 215 339 64 53 chr2 6026732 6026897 -244660957 - MIR SINE MIR -75 133 8 236 231 0 0 chr2 6026962 6027014 -244660840 + L2 LINE L2 3262 3313 0 210 37 0 0 chr2 6028251 6028278 -244659576 + (TA)n Simple_repeat Simple_repeat 1 27 0 243 132 0 0 chr2 6028293 6028346 -244659508 - LTR66 LTR ERVL -169 441 389 401 0 20 0 chr2 6028874 6028923 -244658931 + (TG)n Simple_repeat Simple_repeat 2 51 0 212 260 80 30 chr2 6029361 6029461 -244658393 + MIR3 SINE MIR 93 197 -11 * 223 231 215 31 chr2 6029457 6029587 -244658267 - MIR SINE MIR -4 258 105 189 0 0 0 chr2 6030505 6030526 -244657328 + (TAA)n Simple_repeat Simple_repeat 2 22 0 28 0 0 0 chr2 6031151 6031179 -244656675 + AT_rich Low_complexity Low_complexity 1 28 0 876 245 20 0 chr2 6031205 6031401 -244656453 + L1ME1 LINE L1 5480 5679 -487 1188 153 0 10 chr2 6031405 6031607 -244656247 + L1PBa LINE L1 1 200 -6663 * 2673 123 33 16 chr2 6031581 6032067 -244655787 + L1PBa LINE L1 599 1135 -5728 10335 96 66 6 chr2 6032083 6033688 -244654166 + L1PBa LINE L1 1297 2996 -3866 875 212 16 11 chr2 6033688 6033877 -244653977 - LTR1 LTR ERV1 -593 192 3 14674 174 45 54 chr2 6033879 6036994 -244650860 - HUERS-P2 LTR ERV1 0 3088 2 2601 199 109 66 chr2 6036995 6037786 -244650068 - LTR1B LTR ERV1 0 826 2 5749 175 25 9 chr2 6037787 6039422 -244648432 + L1PB1 LINE L1 4132 5791 -360 207 143 57 29 chr2 6039437 6039542 -244648312 + (TA)n Simple_repeat Simple_repeat 1 108 0 470 45 45 30 chr2 6039580 6039634 -244648220 - L1PB1 LINE L1 -302 5849 5792 207 0 0 0 chr2 6039634 6039657 -244648197 + (TG)n Simple_repeat Simple_repeat 1 23 0 470 45 45 30 chr2 6039657 6039669 -244648185 - L1PB1 LINE L1 -359 5792 5782 455 127 70 14 chr2 6039686 6039951 -244647903 + (TA)n Simple_repeat Simple_repeat 1 250 -425 2908 63 11 8 chr2 6039951 6040315 -244647539 + L1PB1 LINE L1 5782 6146 -5 455 127 70 14 chr2 6040315 6040326 -244647528 + (TA)n Simple_repeat Simple_repeat 250 675 0 1347 249 95 19 chr2 6040332 6040805 -244647049 + L1ME1 LINE L1 5654 6162 -4 900 122 23 0 chr2 6040825 6040956 -244646898 + AluSx SINE Alu 1 134 -179 402 151 0 0 chr2 6040956 6041029 -244646825 + (TA)n Simple_repeat Simple_repeat 1 73 0 1089 141 0 40 chr2 6041032 6041209 -244646645 + AluSx SINE Alu 127 296 -16 249 33 0 0 chr2 6041894 6041924 -244645930 + (CA)n Simple_repeat Simple_repeat 1 30 0 215 288 38 0 chr2 6042226 6042306 -244645548 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 287 291 50 64 chr2 6042952 6043093 -244644761 + L2 LINE L2 3134 3272 0 382 298 33 33 chr2 6043841 6043962 -244643892 - L2 LINE L2 -9 3304 3184 885 289 43 10 chr2 6044259 6044560 -244643294 + L2 LINE L2 1911 2221 -1093 356 306 20 14 chr2 6044579 6044726 -244643128 + L1MEc LINE L1 67 214 -6182 740 288 49 46 chr2 6045237 6045433 -244642421 + L1MEc LINE L1 658 852 -5353 2108 123 10 3 chr2 6045433 6045734 -244642120 + AluSq SINE Alu 1 303 -10 740 288 49 46 chr2 6045734 6046146 -244641708 + L1MEc LINE L1 852 1220 -4985 3686 138 57 7 chr2 6046179 6046794 -244641060 - Tigger4(Zombi) DNA MER2_type 0 2731 2086 560 152 235 38 chr2 6046791 6046923 -244640931 - Tigger4(Zombi) DNA MER2_type -2571 160 3 * 213 167 21 21 chr2 6046923 6046971 -244640883 + (CA)n Simple_repeat Simple_repeat 1 48 0 666 278 91 53 chr2 6047074 6047215 -244640639 + L1MEc LINE L1 1506 1640 -4756 832 207 5 0 chr2 6047215 6047403 -244640451 + L1MD1 LINE L1 6054 6242 0 666 278 91 53 chr2 6047403 6047587 -244640267 + L1MEc LINE L1 1640 1815 -4581 2133 142 0 0 chr2 6047587 6047896 -244639958 + AluSx SINE Alu 1 309 -3 666 278 91 53 chr2 6047896 6048349 -244639505 + L1MEc LINE L1 1815 2315 -4081 3082 229 56 11 chr2 6048578 6049342 -244638512 + L1M4b LINE L1 555 1353 -5506 2232 108 0 0 chr2 6049346 6049634 -244638220 + AluSc SINE Alu 1 288 -21 213 241 0 0 chr2 6049636 6049690 -244638164 + (TA)n Simple_repeat Simple_repeat 1 54 0 291 117 83 0 chr2 6049691 6049751 -244638103 + L1M4b LINE L1 1357 1421 -5438 321 159 0 0 chr2 6049951 6050014 -244637840 + (TG)n Simple_repeat Simple_repeat 1 63 0 21 36 0 0 chr2 6050889 6050917 -244636937 + AT_rich Low_complexity Low_complexity 1 28 0 197 377 85 31 chr2 6051101 6051231 -244636623 - MIR3 SINE MIR -6 202 66 3041 285 105 23 chr2 6052266 6052385 -244635469 + L1MB7 LINE L1 6 114 -6845 1868 148 65 0 chr2 6052385 6052676 -244635178 - AluSx SINE Alu -2 310 1 3041 285 105 23 chr2 6052676 6054777 -244633077 + L1MB7 LINE L1 114 2405 -4554 206 260 0 0 chr2 6054845 6054895 -244632959 + (TA)n Simple_repeat Simple_repeat 2 51 0 355 325 0 0 chr2 6054961 6055075 -244632779 - L1M4b LINE L1 -5344 1515 1402 2239 244 89 36 chr2 6055179 6055699 -244632155 + L1MB7 LINE L1 2560 3051 -3906 352 81 16 16 chr2 6055699 6055761 -244632093 + (TA)n Simple_repeat Simple_repeat 1 62 0 2239 244 89 36 chr2 6055761 6056660 -244631194 + L1MB7 LINE L1 3051 3999 -2958 1157 181 43 27 chr2 6056667 6056966 -244630888 + L1MA7 LINE L1 5988 6291 0 5193 229 77 26 chr2 6056995 6058370 -244629484 + L1MB7 LINE L1 4016 5319 -1676 234 0 0 0 chr2 6058370 6058396 -244629458 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 240 100 0 0 chr2 6058395 6058435 -244629419 + (CA)n Simple_repeat Simple_repeat 1 40 0 5193 229 77 26 chr2 6058396 6059772 -244628082 + L1MB7 LINE L1 5319 6868 -127 3696 60 9 0 chr2 6059772 6060236 -244627618 - L1PA8 LINE L1 -4 6168 5701 358 196 0 0 chr2 6060236 6060328 -244627526 + L1MB8 LINE L1 6072 6163 -15 2091 155 63 24 chr2 6060574 6060987 -244626867 + MSTB1 LTR MaLR 4 432 0 24 0 0 0 chr2 6061429 6061453 -244626401 + AT_rich Low_complexity Low_complexity 1 24 0 198 314 65 46 chr2 6061802 6061955 -244625899 + MIR SINE MIR 81 236 -26 289 297 203 16 chr2 6062375 6062681 -244625173 - MLT1J1 LTR MaLR -24 422 60 207 0 0 0 chr2 6062939 6062962 -244624892 + (CA)n Simple_repeat Simple_repeat 2 24 0 216 0 0 0 chr2 6064555 6064579 -244623275 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 252 0 0 0 chr2 6064578 6064606 -244623248 + (CA)n Simple_repeat Simple_repeat 1 28 0 195 42 0 0 chr2 6064605 6064629 -244623225 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 23 0 0 0 chr2 6065211 6065234 -244622620 + AT_rich Low_complexity Low_complexity 1 23 0 2299 115 24 21 chr2 6066079 6066453 -244621401 + THE1C LTR MaLR 1 375 0 223 213 0 0 chr2 6068963 6069010 -244618844 + MER5B DNA MER1_type 130 176 -2 416 194 108 0 chr2 6069233 6069326 -244618528 + MER5A DNA MER1_type 4 106 -83 330 336 27 0 chr2 6069389 6069499 -244618355 + MER5B DNA MER1_type 1 113 -65 279 323 56 19 chr2 6072355 6072516 -244615338 + MIR SINE MIR 84 250 -12 * 769 318 25 8 chr2 6072460 6072705 -244615149 - MIR SINE MIR -6 256 8 1457 213 23 0 chr2 6073150 6073455 -244614399 - AluJo SINE Alu 0 312 1 261 375 83 0 chr2 6075553 6075673 -244612181 - L2 LINE L2 -1 3271 3142 521 305 46 6 chr2 6076301 6076475 -244611379 - MIR SINE MIR -16 246 66 366 263 37 26 chr2 6077268 6077458 -244610396 + LTR33A LTR ERVL 328 519 -4 1393 155 91 16 chr2 6077792 6078044 -244609810 - AluJb SINE Alu -16 296 26 351 278 0 0 chr2 6078683 6078755 -244609099 - MIR SINE MIR -92 116 45 671 258 42 24 chr2 6078848 6078910 -244608944 - MER58A DNA MER1_type -2203 217 158 2344 122 53 26 chr2 6078910 6079327 -244608527 - MSTA LTR MaLR 0 428 1 671 258 42 24 chr2 6079327 6079477 -244608377 - MER58A DNA MER1_type -2262 158 1 439 326 80 37 chr2 6079514 6079916 -244607938 - MLT1J LTR MaLR -57 454 36 191 111 0 0 chr2 6080176 6080203 -244607651 + MIR SINE MIR 118 144 -118 857 188 17 59 chr2 6081889 6082128 -244605726 + MSTB2 LTR MaLR 229 457 0 1094 197 55 108 chr2 6082174 6082555 -244605299 + MLT1A1 LTR MaLR 1 361 -4 253 364 29 29 chr2 6083266 6083406 -244604448 + MIR3 SINE MIR 16 155 -53 21 36 0 0 chr2 6083600 6083628 -244604226 + AT_rich Low_complexity Low_complexity 1 28 0 336 48 0 0 chr2 6083775 6083817 -244604037 + (GA)n Simple_repeat Simple_repeat 1 42 0 184 318 91 23 chr2 6086222 6086354 -244601500 - MIR SINE MIR -65 197 57 195 69 0 0 chr2 6087358 6087387 -244600467 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 203 316 93 14 chr2 6087514 6087653 -244600201 + L2 LINE L2 2672 2821 -493 31 44 0 0 chr2 6088330 6088375 -244599479 + AT_rich Low_complexity Low_complexity 1 45 0 359 318 25 30 chr2 6088992 6089126 -244598728 - L1ME LINE L1 -404 5717 5583 1949 189 18 10 chr2 6089126 6089513 -244598341 + MLT1B LTR MaLR 1 390 0 359 318 25 30 chr2 6089513 6089576 -244598278 - L1ME LINE L1 -538 5583 5521 1809 162 40 30 chr2 6090381 6090752 -244597102 + THE1C LTR MaLR 1 375 0 21 57 0 0 chr2 6090784 6090819 -244597035 + AT_rich Low_complexity Low_complexity 1 35 0 206 382 35 18 chr2 6091002 6091172 -244596682 + L2 LINE L2 2828 3000 -272 318 318 96 36 chr2 6091207 6091487 -244596367 + HAL1b LINE L1 527 823 -525 1659 223 11 6 chr2 6091552 6091915 -244595939 + MLT1A1 LTR MaLR 1 365 0 258 294 16 16 chr2 6092307 6092433 -244595421 + (TA)n Simple_repeat Simple_repeat 2 127 0 294 277 47 84 chr2 6093435 6093648 -244594206 + MIR SINE MIR 8 212 -50 1602 165 92 9 chr2 6093767 6094083 -244593771 + MER2 DNA MER2_type 2 343 -1 26 0 0 0 chr2 6094634 6094660 -244593194 + AT_rich Low_complexity Low_complexity 1 26 0 238 269 222 9 chr2 6094801 6094909 -244592945 + MIR SINE MIR 48 178 -84 22 56 0 0 chr2 6094917 6094953 -244592901 + AT_rich Low_complexity Low_complexity 1 36 0 4453 132 1 12 chr2 6094953 6095673 -244592181 - L1PA13 LINE L1 -5 6158 5447 265 315 96 92 chr2 6095892 6096194 -244591660 - L2 LINE L2 -9 3304 2998 852 230 0 0 chr2 6096194 6096355 -244591499 + FRAM SINE Alu 1 161 -5 265 315 96 92 chr2 6096355 6096532 -244591322 - L2 LINE L2 -315 2998 2823 197 403 32 13 chr2 6096572 6096726 -244591128 - L2 LINE L2 -602 2712 2556 2152 130 0 3 chr2 6097331 6097639 -244590215 + AluSx SINE Alu 6 312 0 4989 177 25 6 chr2 6098533 6099425 -244588429 + MER49 LTR ERV1 8 916 -7 213 65 0 0 chr2 6100009 6100040 -244587814 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 353 162 0 14 chr2 6100610 6100684 -244587170 + GA-rich Low_complexity Low_complexity 4 76 0 365 255 10 10 chr2 6100917 6101015 -244586839 - MIR SINE MIR -118 144 47 212 281 88 44 chr2 6101639 6101753 -244586101 - MIR SINE MIR -74 188 70 21 0 0 0 chr2 6102235 6102256 -244585598 + AT_rich Low_complexity Low_complexity 1 21 0 1207 182 0 85 chr2 6102299 6102557 -244585297 + AluJo SINE Alu 1 236 -76 447 176 22 11 chr2 6102659 6102750 -244585104 + MSTC LTR MaLR 337 428 0 21 36 0 0 chr2 6104716 6104744 -244583110 + AT_rich Low_complexity Low_complexity 1 28 0 320 290 8 40 chr2 6104769 6104893 -244582961 - MIR SINE MIR -109 153 34 214 292 42 25 chr2 6107265 6107385 -244580469 + MIR SINE MIR 21 142 -120 1668 235 15 50 chr2 6108030 6108553 -244579301 + MLT1D LTR MaLR 1 505 0 22 0 0 0 chr2 6108690 6108712 -244579142 + AT_rich Low_complexity Low_complexity 1 22 0 272 97 42 14 chr2 6109278 6109350 -244578504 + (TG)n Simple_repeat Simple_repeat 1 74 0 344 196 27 20 chr2 6109376 6109524 -244578330 + (TG)n Simple_repeat Simple_repeat 1 149 0 225 353 17 8 chr2 6112548 6112667 -244575187 - MER5B DNA MER1_type -5 173 54 30 0 0 0 chr2 6112690 6112720 -244575134 + AT_rich Low_complexity Low_complexity 1 30 0 653 224 22 49 chr2 6112781 6112964 -244574890 - MER58C DNA MER1_type 0 215 38 231 291 13 0 chr2 6113080 6113159 -244574695 + MIR3 SINE MIR 124 203 -5 257 217 87 0 chr2 6113317 6113386 -244574468 + MIR SINE MIR 118 192 -70 410 264 47 27 chr2 6113440 6113588 -244574266 + MIR SINE MIR 65 215 -47 253 318 76 23 chr2 6114765 6114897 -244572957 - MIR SINE MIR -119 143 5 389 183 20 33 chr2 6116799 6116952 -244570902 + CT-rich Low_complexity Low_complexity 3 153 0 1492 127 18 9 chr2 6116954 6117175 -244570679 - AluSc SINE Alu -3 306 81 1789 162 6 34 chr2 6117175 6117496 -244570358 - AluJb SINE Alu 0 312 1 300 296 57 0 chr2 6117542 6117630 -244570224 - MIR SINE MIR -79 183 91 257 254 167 7 chr2 6117654 6117792 -244570062 - MIR SINE MIR -3 259 100 1768 154 89 17 chr2 6119050 6119400 -244568454 - THE1C LTR MaLR 0 375 1 24 0 0 0 chr2 6119541 6119565 -244568289 + AT_rich Low_complexity Low_complexity 1 24 0 448 270 68 0 chr2 6119712 6119860 -244567994 + MIR SINE MIR 4 161 -101 1132 215 99 52 chr2 6119893 6120477 -244567377 - LTR48B LTR ERV1 0 644 1 2040 179 82 131 chr2 6120532 6121293 -244566561 - LTR8A LTR ERV1 -4 723 1 2313 161 67 7 chr2 6122010 6122414 -244565440 - MSTA LTR MaLR 0 428 1 2129 195 20 66 chr2 6122668 6123143 -244564711 + MLT2B1 LTR ERVL 1 496 -24 512 43 29 0 chr2 6123143 6123213 -244564641 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 2129 195 20 66 chr2 6123213 6123229 -244564625 + MLT2B1 LTR ERVL 496 468 -52 2424 123 22 6 chr2 6123229 6123587 -244564267 - THE1B LTR MaLR 0 364 1 2129 195 20 66 chr2 6123587 6123637 -244564217 + MLT2B1 LTR ERVL 467 518 -2 1934 152 22 26 chr2 6124570 6124924 -244562930 + MLT2A2 LTR ERVL 3 309 -144 1170 133 0 6 chr2 6125014 6125195 -244562659 + MLT2A2 LTR ERVL 274 453 0 2427 50 0 3 chr2 6126182 6126488 -244561366 + AluY SINE Alu 1 305 0 419 322 94 59 chr2 6126742 6127198 -244560656 - MLT1K LTR MaLR 0 588 117 2271 96 0 3 chr2 6128672 6128965 -244558889 - AluY SINE Alu -19 292 1 1923 67 8 4 chr2 6129602 6129855 -244557999 - L1PA7 LINE L1 0 6154 5901 267 264 33 0 chr2 6129877 6129968 -244557886 - MER5A DNA MER1_type -95 94 1 246 62 0 0 chr2 6130115 6130147 -244557707 + (A)n Simple_repeat Simple_repeat 1 32 0 376 200 109 0 chr2 6131328 6131438 -244556416 - MER20 DNA MER1_type -95 124 3 1295 132 80 0 chr2 6131444 6131657 -244556197 + MER30 DNA MER1_type 1 230 0 216 194 45 0 chr2 6131750 6131884 -244555970 + (TG)n Simple_repeat Simple_repeat 2 141 0 218 191 23 30 chr2 6131971 6132102 -244555752 + (TG)n Simple_repeat Simple_repeat 2 131 0 541 150 22 28 chr2 6132113 6132293 -244555561 + (TG)n Simple_repeat Simple_repeat 1 179 0 431 204 39 6 chr2 6132315 6132632 -244555222 + (TG)n Simple_repeat Simple_repeat 1 327 0 234 62 0 0 chr2 6133537 6133569 -244554285 + (TAA)n Simple_repeat Simple_repeat 1 32 0 201 156 0 0 chr2 6135074 6135106 -244552748 + CT-rich Low_complexity Low_complexity 2 33 0 33 0 0 0 chr2 6135545 6135578 -244552276 + AT_rich Low_complexity Low_complexity 1 33 0 440 281 31 40 chr2 6137675 6137920 -244549934 - MIR SINE MIR -15 247 4 2255 101 3 0 chr2 6138162 6138449 -244549405 + AluSc SINE Alu 1 288 -21 25 51 0 0 chr2 6139262 6139301 -244548553 + AT_rich Low_complexity Low_complexity 1 39 0 1958 133 3 7 chr2 6139351 6139636 -244548218 + MER1B DNA MER1_type 43 326 -13 3617 255 115 52 chr2 6139687 6141786 -244546068 - Charlie7 DNA MER1_type -139 2473 243 1845 185 25 33 chr2 6142140 6142507 -244545347 - MLT1A1 LTR MaLR 0 365 2 263 361 31 0 chr2 6143016 6143146 -244544708 - MIR SINE MIR -50 212 79 229 320 82 0 chr2 6143762 6143884 -244543970 + MIR SINE MIR 76 207 -55 183 190 40 20 chr2 6144518 6144618 -244543236 + (CA)n Simple_repeat Simple_repeat 1 102 0 386 218 45 0 chr2 6144638 6144794 -244543060 + (CA)n Simple_repeat Simple_repeat 1 163 0 185 158 132 0 chr2 6150565 6150603 -244537251 + MIR SINE MIR 81 123 -85 2387 134 8 21 chr2 6152493 6152873 -244534981 + THE1C LTR MaLR 1 375 0 205 284 142 45 chr2 6154685 6154819 -244533035 + L2 LINE L2 3166 3312 -1 228 325 13 0 chr2 6155795 6155872 -244531982 - MIR SINE MIR -108 154 77 199 220 7 50 chr2 6157034 6157175 -244530679 + GA-rich Low_complexity Low_complexity 2 136 0 243 285 146 8 chr2 6157692 6157815 -244530039 + L2 LINE L2 3132 3271 -1 229 301 12 0 chr2 6157984 6158067 -244529787 + MIR SINE MIR 111 194 -68 748 247 57 10 chr2 6158105 6158299 -244529555 - MLT1B LTR MaLR 0 467 265 329 281 9 9 chr2 6158299 6158413 -244529441 - MIR SINE MIR -132 130 17 794 196 87 4 chr2 6158484 6158709 -244529145 - MLT1B LTR MaLR -186 204 9 625 289 21 4 chr2 6158746 6158981 -244528873 + MIR SINE MIR 20 258 -4 352 242 77 0 chr2 6160577 6160668 -244527186 + MER63 DNA MER1_type 1 724 -112 567 203 99 81 chr2 6161067 6161289 -244526565 + HAL1 LINE L1 1 226 -2281 818 170 12 12 chr2 6161772 6162022 -244525832 + GA-rich Low_complexity Low_complexity 1 250 0 357 24 0 0 chr2 6162024 6162066 -244525788 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 825 241 137 52 chr2 6162067 6162491 -244525363 - MLT1C LTR MaLR -4 463 4 237 259 12 25 chr2 6162494 6162575 -244525279 + GA-rich Low_complexity Low_complexity 3 82 0 1843 219 73 7 chr2 6162685 6163137 -244524717 + L1MB2 LINE L1 5686 6167 -4 406 83 0 17 chr2 6163439 6163499 -244524355 - L1PA13 LINE L1 -846 5458 5400 5025 90 1 13 chr2 6163499 6164197 -244523657 + L1PA13 LINE L1 5470 6161 -2 198 260 26 52 chr2 6164963 6165040 -244522814 - MIR3 SINE MIR -39 169 95 210 37 0 0 chr2 6165320 6165347 -244522507 + (CAGAGA)n Simple_repeat Simple_repeat 4 30 0 209 270 126 50 chr2 6166066 6166225 -244521629 - MIR3 SINE MIR -22 186 16 226 304 194 42 chr2 6166728 6166919 -244520935 + MIR SINE MIR 30 249 -13 399 306 136 71 chr2 6167412 6167978 -244519876 + L1MC4a LINE L1 5265 5867 -1941 1868 81 20 6 chr2 6168653 6169043 -244518811 - MLT2A2 LTR ERVL 0 453 1 515 294 0 0 chr2 6170128 6170291 -244517563 + MIR SINE MIR 95 257 -5 219 333 28 28 chr2 6170313 6170421 -244517433 - MIR SINE MIR -64 144 37 483 332 62 7 chr2 6170730 6171004 -244516850 - L1ME LINE L1 -307 5814 5526 661 123 0 25 chr2 6171154 6171276 -244516578 + (GGAA)n Simple_repeat Simple_repeat 1 119 0 199 274 32 0 chr2 6171314 6171376 -244516478 + MIR SINE MIR 159 222 -40 191 343 81 6 chr2 6171876 6172048 -244515806 + L2 LINE L2 2981 3165 -148 2025 130 33 20 chr2 6172151 6172452 -244515402 - AluSq SINE Alu -8 305 1 2586 71 21 0 chr2 6172527 6172865 -244514989 + L1P3 LINE L1 5361 5705 -467 219 319 8 50 chr2 6172866 6172985 -244514869 + L2 LINE L2 3180 3293 -20 327 301 64 13 chr2 6174076 6174232 -244513622 - MIR SINE MIR -62 200 37 450 83 0 42 chr2 6174300 6174372 -244513482 + MADE1 DNA Mariner 10 78 -2 346 252 48 29 chr2 6174374 6174477 -244513377 - L2 LINE L2 -36 3277 3173 196 320 39 39 chr2 6174785 6174963 -244512891 - L2 LINE L2 -578 2736 2559 295 233 63 47 chr2 6175262 6175348 -244512506 - MIR3 SINE MIR -53 155 68 28 0 0 0 chr2 6175416 6175444 -244512410 + AT_rich Low_complexity Low_complexity 1 28 0 299 333 9 0 chr2 6176306 6176411 -244511443 + MIR3 SINE MIR 67 172 -36 2195 112 0 3 chr2 6176928 6177223 -244510631 + AluSc SINE Alu 1 294 -15 2332 95 0 20 chr2 6177893 6178198 -244509656 + AluSg SINE Alu 1 299 -11 192 252 9 17 chr2 6178516 6178631 -244509223 + GA-rich Low_complexity Low_complexity 4 117 0 401 205 53 76 chr2 6178635 6178806 -244509048 + HAL1 LINE L1 1011 1177 -1330 819 284 192 15 chr2 6178838 6179296 -244508558 + L1ME1 LINE L1 36 574 -5822 1225 265 86 52 chr2 6179314 6180465 -244507389 + L1ME1 LINE L1 1091 6230 -5 337 159 63 0 chr2 6181118 6181181 -244506673 - MLT1A2 LTR MaLR 0 390 324 586 228 124 0 chr2 6181191 6181336 -244506518 + FRAM SINE Alu 4 166 0 562 250 6 6 chr2 6181336 6181516 -244506338 + GA-rich Low_complexity Low_complexity 1 180 0 519 227 4 9 chr2 6181539 6181687 -244506167 - MLT1A2 LTR MaLR -56 372 192 750 219 21 42 chr2 6181737 6181929 -244505925 - MLT1A2 LTR MaLR -186 188 1 392 269 85 28 chr2 6182025 6182290 -244505564 - L1ME LINE L1 -4685 1576 1107 1594 223 77 12 chr2 6182305 6182736 -244505118 - MLT1C LTR MaLR 0 467 1 2111 273 82 26 chr2 6182736 6183889 -244503965 - L1ME LINE L1 -4846 1234 14 568 309 73 25 chr2 6184540 6184932 -244502922 - MLT1J LTR MaLR -45 466 13 279 0 0 0 chr2 6185289 6185320 -244502534 + (CA)n Simple_repeat Simple_repeat 2 32 0 359 318 0 0 chr2 6185321 6185428 -244502426 - MER5B DNA MER1_type -71 107 1 1027 142 0 0 chr2 6185832 6185987 -244501867 - AluSx SINE Alu -1 311 157 585 111 0 0 chr2 6185987 6186068 -244501786 - AluSx SINE Alu -231 82 2 1962 146 7 0 chr2 6186100 6186403 -244501451 + AluJb SINE Alu 1 305 0 313 176 110 11 chr2 6186487 6186578 -244501276 - MLT1J LTR MaLR -38 473 374 32544 218 19 16 chr2 6186613 6195039 -244492815 - HUERS-P3 LTR ERV1 -224 8695 259 484 138 11 53 chr2 6195043 6195137 -244492717 - HUERS-P3 LTR ERV1 -6905 91 2 4856 136 44 3 chr2 6195155 6195914 -244491940 - LTR25 LTR ERV1 0 794 1 191 256 0 23 chr2 6196959 6197002 -244490852 - MIR3 SINE MIR -24 184 143 563 290 43 0 chr2 6198413 6198575 -244489279 - MIR SINE MIR -2 260 92 591 318 23 9 chr2 6198747 6198964 -244488890 + MIR SINE MIR 5 224 -38 304 357 84 0 chr2 6199158 6199301 -244488553 + MIR SINE MIR 20 174 -88 214 302 83 0 chr2 6199399 6199495 -244488359 - MIR SINE MIR -76 132 29 35 63 0 0 chr2 6200058 6200121 -244487733 + AT_rich Low_complexity Low_complexity 1 63 0 2271 112 0 0 chr2 6201203 6201499 -244486355 - AluSx SINE Alu -16 296 1 2243 54 0 0 chr2 6201908 6202168 -244485686 + AluY SINE Alu 39 298 -13 260 270 74 61 chr2 6203042 6203205 -244484649 - MIR SINE MIR -59 203 39 1625 147 120 78 chr2 6203294 6203341 -244484513 + MSTA LTR MaLR 3 47 -381 610 88 0 0 chr2 6203341 6203421 -244484433 - MADE1 DNA Mariner 0 80 1 1625 147 120 78 chr2 6203421 6203782 -244484072 + MSTA LTR MaLR 47 428 0 223 297 20 68 chr2 6203941 6204089 -244483765 + L2 LINE L2 2560 2700 -614 810 289 31 33 chr2 6204223 6204794 -244483060 + L1ME3A LINE L1 5458 6157 -13 327 295 29 7 chr2 6205103 6205242 -244482612 - L1ME LINE L1 -351 5811 5670 1499 162 63 36 chr2 6205564 6205867 -244481987 - AluJo SINE Alu -1 311 1 2214 65 7 4 chr2 6205875 6206150 -244481704 - AluY SINE Alu -1 310 35 451 332 53 66 chr2 6206172 6206709 -244481145 + L2 LINE L2 2698 3241 -72 2251 140 79 15 chr2 6206709 6207051 -244480803 + THE1B LTR MaLR 1 364 0 12522 89 11 1 chr2 6207051 6208614 -244479240 + THE1B-int LTR MaLR 1 1579 -1 2368 117 73 15 chr2 6208617 6208959 -244478895 + THE1B LTR MaLR 3 364 0 451 332 53 66 chr2 6208959 6209037 -244478817 + L2 LINE L2 3242 3307 -6 280 157 88 69 chr2 6209082 6209184 -244478670 + MIR SINE MIR 60 163 -99 324 48 0 0 chr2 6209343 6209385 -244478469 + (CA)n Simple_repeat Simple_repeat 2 43 0 409 283 108 42 chr2 6210452 6210692 -244477162 - MIR SINE MIR 0 262 7 355 323 137 50 chr2 6211230 6211611 -244476243 + L2 LINE L2 2834 3247 -25 661 284 85 21 chr2 6212375 6212611 -244475243 - MIR SINE MIR -11 251 1 180 375 39 48 chr2 6212803 6212907 -244474947 - MIR SINE MIR -87 121 19 322 291 151 71 chr2 6213414 6214022 -244473832 - L1M2 LINE L1 -5480 1369 713 550 265 110 82 chr2 6214752 6215242 -244472612 + Tigger8 DNA MER2_type 63 566 -100 1784 203 12 50 chr2 6215419 6215823 -244472031 - MLT1B LTR MaLR 0 390 2 393 261 130 52 chr2 6216443 6216766 -244471088 + L1M3 LINE L1 3103 3444 -2702 615 314 51 46 chr2 6217203 6217595 -244470259 + MER68 LTR ERV1 156 549 -13 180 111 0 0 chr2 6217600 6217627 -244470227 + (CA)n Simple_repeat Simple_repeat 1 27 0 500 230 100 53 chr2 6217745 6217994 -244469860 + L1M3 LINE L1 5183 5440 -728 2545 188 46 0 chr2 6218022 6218475 -244469379 + MER101 LTR ERV1 1 474 0 1948 174 43 57 chr2 6219646 6220142 -244467712 + MER31-int LTR ERV1 815 3120 -3211 567 270 56 30 chr2 6220073 6220343 -244467511 + LTR57-int LTR ERVL 1234 1510 -3833 * 473 263 71 25 chr2 6220385 6220583 -244467271 + MER31-int LTR ERV1 1711 1917 -3019 1223 188 32 73 chr2 6220671 6221177 -244466677 + MER31-int LTR ERV1 2052 3835 -2428 901 143 20 51 chr2 6221321 6221517 -244466337 + MER31-int LTR ERV1 3541 3730 -2868 1288 201 98 81 chr2 6221597 6222177 -244465677 + MER31-int LTR ERV1 3287 3501 -1514 2732 150 11 23 chr2 6222177 6222610 -244465244 + MSTA LTR MaLR 1 428 0 1288 201 98 81 chr2 6222610 6223197 -244464657 + MER31-int LTR ERV1 3501 4077 -938 262 169 56 61 chr2 6223218 6223366 -244464488 + MER31-int LTR ERV1 5200 5397 -934 534 229 21 21 chr2 6223375 6223519 -244464335 + MER31-int LTR ERV1 4259 4402 -534 381 305 71 38 chr2 6224990 6225202 -244462652 - MIR SINE MIR -6 256 35 942 260 66 3 chr2 6227122 6227410 -244460444 - L1ME3A LINE L1 -2 6168 5863 204 310 150 0 chr2 6227442 6227542 -244460312 + L2 LINE L2 2541 2655 -659 204 315 14 27 chr2 6227988 6228061 -244459793 + L2 LINE L2 3201 3272 0 330 275 62 83 chr2 6228091 6228283 -244459571 + MIR SINE MIR 19 204 -58 30 45 0 0 chr2 6228298 6228342 -244459512 + AT_rich Low_complexity Low_complexity 1 44 0 4176 113 28 2 chr2 6228457 6229022 -244458832 - LTR19B LTR ERV1 0 580 1 53 0 0 0 chr2 6229051 6229104 -244458750 + AT_rich Low_complexity Low_complexity 1 53 0 267 224 24 88 chr2 6229519 6229644 -244458210 + MER94 DNA DNA 1 117 -17 331 331 63 0 chr2 6229684 6229826 -244458028 + MIR SINE MIR 46 196 -66 340 294 133 45 chr2 6230208 6230494 -244457360 + HAL1 LINE L1 593 903 -1604 1228 275 144 29 chr2 6230495 6231243 -244456611 + HAL1 LINE L1 928 1761 -746 253 141 109 43 chr2 6231335 6231427 -244456427 + LTR33A LTR ERVL 360 457 -66 231 316 59 59 chr2 6232104 6232240 -244455614 + MER5B DNA MER1_type 43 178 0 23 54 0 0 chr2 6233117 6233154 -244454700 + AT_rich Low_complexity Low_complexity 1 37 0 750 316 56 22 chr2 6233269 6233592 -244454262 - MER68 LTR ERV1 0 562 229 202 331 8 58 chr2 6236258 6236379 -244451475 - L2 LINE L2 -223 3049 2935 22 56 0 0 chr2 6239344 6239380 -244448474 + AT_rich Low_complexity Low_complexity 1 36 0 293 305 102 11 chr2 6239546 6239733 -244448121 + L1ME LINE L1 5518 5721 -400 2390 75 3 0 chr2 6239735 6240059 -244447795 + AluY SINE Alu 1 311 0 22 0 0 0 chr2 6240622 6240644 -244447210 + AT_rich Low_complexity Low_complexity 1 22 0 197 306 124 16 chr2 6240675 6240796 -244447058 - MIR SINE MIR -10 252 119 394 197 271 0 chr2 6240883 6241005 -244446849 - MER5A DNA MER1_type -7 182 28 1143 252 72 6 chr2 6241049 6241367 -244446487 + MER58B DNA MER1_type 2 340 -1 23 33 0 0 chr2 6241971 6242001 -244445853 + AT_rich Low_complexity Low_complexity 1 30 0 1387 188 90 10 chr2 6242708 6242996 -244444858 - AluJb SINE Alu -1 311 1 205 156 0 0 chr2 6243560 6243592 -244444262 + (CATG)n Simple_repeat Simple_repeat 3 34 0 2211 99 10 0 chr2 6245972 6246264 -244441590 + AluSg SINE Alu 6 300 -10 186 71 0 0 chr2 6246531 6246559 -244441295 + (CCA)n Simple_repeat Simple_repeat 2 29 0 206 196 18 18 chr2 6247019 6247075 -244440779 + (TATATG)n Simple_repeat Simple_repeat 1 56 0 20123 104 6 47 chr2 6247075 6252759 -244435095 - L1PA7 LINE L1 -12 6142 834 2234 129 0 0 chr2 6252759 6253069 -244434785 - AluSg SINE Alu 0 310 1 20123 104 6 47 chr2 6253069 6253860 -244433994 - L1PA7 LINE L1 -5320 834 12 310 230 111 0 chr2 6253983 6254118 -244433736 - L1ME4a LINE L1 0 6121 5972 495 0 0 0 chr2 6254391 6254446 -244433408 + (CA)n Simple_repeat Simple_repeat 2 56 0 1300 234 101 3 chr2 6254795 6255132 -244432722 - MLT1A2 LTR MaLR -4 370 1 198 187 103 14 chr2 6255816 6255881 -244431973 + MIR SINE MIR 82 214 -48 235 433 55 16 chr2 6256151 6256278 -244431576 - L2 LINE L2 -18 3254 3123 2443 117 6 6 chr2 6256463 6256813 -244431041 + L1PB1 LINE L1 5801 6150 -1 281 328 41 16 chr2 6257821 6257943 -244429911 - MIR SINE MIR -34 228 104 297 0 0 0 chr2 6258602 6258635 -244429219 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 269 13 0 chr2 6259038 6259116 -244428738 - LTR16A LTR ERVL 0 450 372 298 210 25 25 chr2 6259819 6259900 -244427954 - MLT1J1 LTR MaLR -2 444 364 255 367 0 0 chr2 6260372 6260451 -244427403 + MIR3 SINE MIR 109 187 -21 252 313 111 0 chr2 6260523 6260622 -244427232 - L2 LINE L2 -1 3271 3162 2809 143 22 13 chr2 6260772 6260860 -244426994 - MLT1C LTR MaLR 0 467 381 2475 157 80 46 chr2 6260860 6260900 -244426954 - MLT2B2 LTR ERVL 0 515 478 415 32 16 16 chr2 6260900 6260962 -244426892 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 2475 157 80 46 chr2 6260962 6261419 -244426435 - MLT2B2 LTR ERVL -37 478 1 2809 143 22 13 chr2 6261419 6261779 -244426075 - MLT1C LTR MaLR -86 381 15 2529 110 42 14 chr2 6262005 6262359 -244425495 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr2 6262675 6262696 -244425158 + AT_rich Low_complexity Low_complexity 1 21 0 2405 83 6 3 chr2 6262771 6263083 -244424771 - AluSp SINE Alu 0 313 1 197 194 0 0 chr2 6263516 6263552 -244424302 - MIR SINE MIR -9 253 218 810 238 0 0 chr2 6264551 6264719 -244423135 - AluJb SINE Alu -14 298 131 412 271 142 7 chr2 6264720 6264875 -244422979 - MIR SINE MIR -69 193 18 34 84 0 0 chr2 6265558 6265641 -244422213 + GC_rich Low_complexity Low_complexity 1 83 0 22 70 0 0 chr2 6265748 6265791 -244422063 + GC_rich Low_complexity Low_complexity 1 43 0 1507 172 46 14 chr2 6266048 6266333 -244421521 + AluJb SINE Alu 1 294 -18 306 0 0 0 chr2 6268596 6268630 -244419224 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 379 277 13 43 chr2 6269487 6269572 -244418282 + L1ME LINE L1 5510 5565 -556 1902 145 35 0 chr2 6269572 6269861 -244417993 - AluSx SINE Alu -13 299 1 379 277 13 43 chr2 6269861 6269932 -244417922 + L1ME LINE L1 5565 5637 -484 2330 217 39 41 chr2 6269961 6270621 -244417233 + L1M4c LINE L1 1238 1896 -4488 1535 103 0 0 chr2 6270627 6270821 -244417033 + AluSq SINE Alu 1 194 -119 22 0 0 0 chr2 6271598 6271620 -244416234 + AT_rich Low_complexity Low_complexity 1 22 0 2662 34 0 0 chr2 6271658 6271954 -244415900 - AluY SINE Alu -15 296 1 443 100 0 133 chr2 6272520 6272610 -244415244 + AluSg/x SINE Alu 218 295 -17 421 197 174 76 chr2 6273710 6273842 -244414012 - MER5A DNA MER1_type -32 157 13 221 314 128 0 chr2 6274181 6274267 -244413587 - MIR SINE MIR -64 144 48 3321 145 41 38 chr2 6274427 6274940 -244412914 - L1MB2 LINE L1 -270 5901 5384 2349 99 3 0 chr2 6274940 6275242 -244412612 - AluSg SINE Alu -7 303 1 3321 145 41 38 chr2 6275242 6275368 -244412486 - L1MB2 LINE L1 -787 5384 5260 835 172 90 0 chr2 6275368 6275513 -244412341 - AluJb SINE Alu -9 303 146 1658 158 0 28 chr2 6275520 6275805 -244412049 - AluJb SINE Alu -23 289 13 923 239 18 5 chr2 6275809 6276031 -244411823 - L1MB2 LINE L1 -871 5275 5051 1447 68 16 5 chr2 6276373 6276564 -244411290 + AluY SINE Alu 103 295 -16 1547 180 34 24 chr2 6277190 6277485 -244410369 + AluJo SINE Alu 1 298 -14 897 265 32 13 chr2 6277488 6277797 -244410057 + L1M4c LINE L1 2445 2759 -3623 1265 147 44 5 chr2 6278425 6278629 -244409225 + AluJb SINE Alu 1 212 -100 2228 112 3 0 chr2 6278629 6278925 -244408929 - AluSx SINE Alu -15 297 1 2107 125 3 3 chr2 6279544 6279841 -244408013 - AluSx SINE Alu -15 297 1 1246 204 91 18 chr2 6280484 6280759 -244407095 - AluJb SINE Alu -17 295 1 2109 86 47 0 chr2 6280898 6281176 -244406678 - AluSq SINE Alu -22 291 1 24 0 0 0 chr2 6281605 6281629 -244406225 + AT_rich Low_complexity Low_complexity 1 24 0 2144 96 20 20 chr2 6281931 6282232 -244405622 + AluSc SINE Alu 1 301 -8 1083 165 0 0 chr2 6282233 6282403 -244405451 + AluSg/x SINE Alu 135 304 -8 247 237 85 0 chr2 6282883 6282957 -244404897 + MLT1G LTR MaLR 223 311 -244 677 307 158 49 chr2 6283462 6283976 -244403878 + L3 LINE CR1 910 1479 -98 185 277 0 46 chr2 6284038 6284103 -244403751 + L3b LINE CR1 1522 1583 0 236 169 135 34 chr2 6284729 6284818 -244403036 - L1PA11 LINE L1 0 6174 6077 2066 197 163 27 chr2 6284820 6284922 -244402932 - Charlie1 DNA MER1_type -353 2408 2321 2323 103 3 6 chr2 6284922 6285234 -244402620 - AluSx SINE Alu -1 311 1 2066 197 163 27 chr2 6285234 6285426 -244402428 - Charlie1 DNA MER1_type -440 2321 2157 2150 140 3 3 chr2 6285426 6285733 -244402121 - AluSx SINE Alu -5 307 1 2066 197 163 27 chr2 6285733 6285932 -244401922 - Charlie1 DNA MER1_type -604 2157 1987 2073 122 10 16 chr2 6285932 6286243 -244401611 - AluSx SINE Alu -3 309 1 2066 197 163 27 chr2 6286243 6286421 -244401433 - Charlie1 DNA MER1_type -774 1987 1643 505 103 0 51 chr2 6286743 6286821 -244401033 - AluJo SINE Alu -17 295 222 771 166 0 58 chr2 6286891 6287030 -244400824 + FLAM_C SINE Alu 1 131 -2 2288 110 0 3 chr2 6287218 6287528 -244400326 - AluSc SINE Alu 0 309 1 1171 150 87 5 chr2 6287546 6287753 -244400101 - AluJo SINE Alu -88 224 1 259 154 0 0 chr2 6288296 6288335 -244399519 - Alu SINE Alu -261 39 1 314 262 267 11 chr2 6288570 6288748 -244399106 + MIR SINE MIR 4 228 -34 794 250 65 22 chr2 6288800 6289032 -244398822 + MIR SINE MIR 20 261 -1 867 173 0 0 chr2 6289121 6289254 -244398600 + FLAM_C SINE Alu 1 133 0 2230 95 3 0 chr2 6290606 6290891 -244396963 - AluSx SINE Alu -26 286 1 530 309 87 17 chr2 6291033 6291263 -244396591 + MIR SINE MIR 14 259 -3 207 282 42 0 chr2 6291411 6291482 -244396372 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 2263 118 0 0 chr2 6291858 6292164 -244395690 - AluSx SINE Alu -6 306 1 296 215 108 46 chr2 6294321 6294451 -244393403 + MIR SINE MIR 88 225 -37 2153 116 10 0 chr2 6294617 6294911 -244392943 - AluSg SINE Alu -13 297 1 40 67 0 0 chr2 6295002 6295077 -244392777 + AT_rich Low_complexity Low_complexity 1 75 0 2206 123 3 0 chr2 6295992 6296300 -244391554 - AluSx SINE Alu -3 309 1 192 97 0 0 chr2 6296860 6296891 -244390963 + (CAGAGA)n Simple_repeat Simple_repeat 1 31 0 2357 97 0 0 chr2 6296902 6297201 -244390653 - AluSg SINE Alu -11 299 1 1345 148 145 28 chr2 6297940 6298264 -244389590 + L1MB5 LINE L1 5813 6174 0 248 252 84 37 chr2 6298425 6298532 -244389322 - L2 LINE L2 -862 2452 2341 408 214 143 9 chr2 6298714 6298826 -244389028 - MER94 DNA DNA -1 133 7 206 319 0 14 chr2 6299054 6299123 -244388731 - L3 LINE CR1 -1 1576 1509 23 0 0 0 chr2 6300091 6300114 -244387740 + AT_rich Low_complexity Low_complexity 1 23 0 43 20 0 0 chr2 6300589 6300639 -244387215 + AT_rich Low_complexity Low_complexity 1 50 0 2505 86 0 0 chr2 6302126 6302439 -244385415 + AluSq SINE Alu 1 313 0 755 289 50 11 chr2 6302452 6302732 -244385122 + HAL1 LINE L1 1637 1927 -580 513 281 105 4 chr2 6302968 6303196 -244384658 + HAL1 LINE L1 2050 2300 -207 25 0 0 0 chr2 6303970 6303995 -244383859 + AT_rich Low_complexity Low_complexity 1 25 0 2479 84 0 3 chr2 6304489 6304799 -244383055 + AluY SINE Alu 1 309 -2 2099 100 3 17 chr2 6305804 6306093 -244381761 - AluSg SINE Alu -23 287 3 1233 154 43 39 chr2 6306159 6306393 -244381461 - AluJo SINE Alu -23 289 55 230 161 0 54 chr2 6307281 6307337 -244380517 - MER5B DNA MER1_type 0 178 126 2106 136 10 3 chr2 6307346 6307656 -244380198 + AluSx SINE Alu 1 312 0 564 242 62 36 chr2 6308250 6308444 -244379410 + MIR SINE MIR 63 261 -1 182 36 0 36 chr2 6309854 6309882 -244377972 + (CCCTG)n Simple_repeat Simple_repeat 4 30 0 2526 30 40 0 chr2 6310488 6310784 -244377070 + AluY SINE Alu 1 308 -3 253 281 92 30 chr2 6311421 6311585 -244376269 - L2 LINE L2 -467 2847 2674 207 333 10 30 chr2 6312874 6312973 -244374881 + MIR3 SINE MIR 78 174 -34 224 331 37 22 chr2 6313449 6313585 -244374269 - MIR SINE MIR -77 185 48 204 307 18 36 chr2 6313695 6313861 -244373993 - L2 LINE L2 -167 3105 2943 2527 77 0 0 chr2 6314619 6314930 -244372924 - AluY SINE Alu 0 311 1 718 223 99 21 chr2 6317636 6317869 -244369985 - MLT1C LTR MaLR -213 254 4 180 77 0 0 chr2 6317877 6317903 -244369951 + (CA)n Simple_repeat Simple_repeat 1 26 0 339 256 116 43 chr2 6317971 6318227 -244369627 - MLT1L LTR MaLR -7 608 235 276 246 25 68 chr2 6318600 6318718 -244369136 + L2 LINE L2 3156 3268 -4 1148 196 107 0 chr2 6319607 6319877 -244367977 + MER33 DNA MER1_type 5 303 -21 21 36 0 0 chr2 6321497 6321525 -244366329 + AT_rich Low_complexity Low_complexity 1 28 0 256 176 14 14 chr2 6322530 6322604 -244365250 + (TA)n Simple_repeat Simple_repeat 1 74 0 1942 163 0 7 chr2 6322605 6322900 -244364954 - AluJb SINE Alu -19 293 1 2189 247 40 16 chr2 6323687 6324420 -244363434 - L1M4 LINE L1 -3250 2896 2147 22 0 0 0 chr2 6325680 6325702 -244362152 + AT_rich Low_complexity Low_complexity 1 22 0 612 278 87 70 chr2 6325738 6326396 -244361458 - L1MC4a LINE L1 -1885 5923 5255 227 202 319 0 chr2 6326784 6326878 -244360976 + MIR SINE MIR 19 142 -120 580 289 100 39 chr2 6326975 6327415 -244360439 + L2 LINE L2 438 904 -2410 189 279 132 37 chr2 6327415 6327551 -244360303 + L2 LINE L2 2051 2199 -1115 208 291 35 64 chr2 6327898 6328039 -244359815 + L2 LINE L2 2435 2571 -743 287 283 168 29 chr2 6328134 6328307 -244359547 + L2 LINE L2 2960 3156 -157 245 233 0 23 chr2 6328307 6328393 -244359461 + (CATA)n Simple_repeat Simple_repeat 4 87 0 378 0 0 0 chr2 6328849 6328891 -244358963 + (TG)n Simple_repeat Simple_repeat 2 43 0 233 0 62 0 chr2 6330231 6330263 -244357591 + (TCCCC)n Simple_repeat Simple_repeat 2 35 0 2391 78 10 0 chr2 6330263 6330558 -244357296 - AluSq SINE Alu -15 298 1 4578 205 40 24 chr2 6330568 6332349 -244355505 - L1MB7 LINE L1 -1 6419 4619 394 290 120 4 chr2 6332342 6332618 -244355236 - L1MB7 LINE L1 -3898 2486 2179 * 196 247 124 21 chr2 6333452 6333549 -244354305 - L2 LINE L2 -4 3268 3162 428 273 132 18 chr2 6333702 6334131 -244353723 - L2 LINE L2 -219 3094 2615 1628 297 163 31 chr2 6334398 6334714 -244353140 - L2 LINE L2 -653 2661 2388 2200 112 0 0 chr2 6334714 6334999 -244352855 + AluSq SINE Alu 1 285 -28 1628 297 163 31 chr2 6334999 6336273 -244351581 - L2 LINE L2 -926 2388 861 195 42 0 0 chr2 6337007 6337031 -244350823 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2037 232 142 79 chr2 6338103 6339545 -244348309 + Charlie2a DNA MER1_type 1079 2611 -251 278 281 31 23 chr2 6339609 6339737 -244348117 + Charlie2a DNA MER1_type 2718 2846 -16 191 371 95 0 chr2 6340499 6340604 -244347250 - MIR SINE MIR -60 148 34 231 114 0 0 chr2 6341386 6341421 -244346433 + (TCCCC)n Simple_repeat Simple_repeat 4 38 0 25 0 0 0 chr2 6341833 6341858 -244345996 + AT_rich Low_complexity Low_complexity 1 25 0 213 171 24 0 chr2 6341939 6341980 -244345874 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1414 277 110 76 chr2 6342334 6345155 -244342699 - L1ME3 LINE L1 -290 5876 2892 2205 99 0 7 chr2 6345155 6345448 -244342406 + AluSq SINE Alu 1 291 -22 1414 277 110 76 chr2 6345448 6346128 -244341726 - L1ME3 LINE L1 -3274 2892 2237 1607 228 40 33 chr2 6351450 6351875 -244335979 - MSTC LTR MaLR 0 428 1 216 97 0 0 chr2 6352969 6353000 -244334854 + (TG)n Simple_repeat Simple_repeat 2 32 0 191 321 84 38 chr2 6353437 6353568 -244334286 - L2 LINE L2 -9 3263 3127 1521 223 66 85 chr2 6353938 6354562 -244333292 - LTR9 LTR ERV1 0 612 1 215 267 0 33 chr2 6355647 6355707 -244332147 + CT-rich Low_complexity Low_complexity 5 62 0 6899 31 8 0 chr2 6356187 6356991 -244330863 + L1PA3 LINE L1 5344 6153 -2 576 237 129 42 chr2 6359522 6359809 -244328045 + LTR16C LTR ERVL 180 491 0 194 271 0 0 chr2 6361129 6361177 -244326677 - MIR SINE MIR -37 225 178 1882 180 22 65 chr2 6361190 6361591 -244326263 + MLT1B LTR MaLR 1 384 -6 1650 153 65 48 chr2 6361603 6361772 -244326082 + MER46B DNA MER2_type 1 166 -2565 2137 94 10 0 chr2 6361772 6362071 -244325783 - AluY SINE Alu -9 302 1 1650 153 65 48 chr2 6362071 6362158 -244325696 + MER46B DNA MER2_type 166 143 -2588 2319 119 19 35 chr2 6362158 6362528 -244325326 + THE1B LTR MaLR 1 364 0 1650 153 65 48 chr2 6362528 6362622 -244325232 + MER46B DNA MER2_type 142 233 -3 338 285 51 7 chr2 6362625 6362762 -244325092 - MIR SINE MIR -108 154 12 646 247 58 49 chr2 6364949 6365192 -244322662 + MIR SINE MIR 15 259 -3 912 254 28 0 chr2 6365749 6365966 -244321888 + MER58A DNA MER1_type 2 224 0 603 226 161 30 chr2 6366308 6366538 -244321316 + MIR SINE MIR 3 262 0 24 0 0 0 chr2 6366845 6366869 -244320985 + AT_rich Low_complexity Low_complexity 1 24 0 2031 131 66 26 chr2 6367066 6367416 -244320438 - THE1B LTR MaLR 0 364 1 1672 174 0 10 chr2 6367552 6367851 -244320003 + AluJb SINE Alu 1 296 -16 1333 256 125 17 chr2 6367891 6368372 -244319482 - L1MC4a LINE L1 -1883 5925 5393 189 136 16 56 chr2 6368569 6368694 -244319160 + (TA)n Simple_repeat Simple_repeat 1 120 0 262 294 59 54 chr2 6368949 6369214 -244318640 - L1MC/D LINE L1 -446 5675 5444 267 356 8 0 chr2 6369215 6369333 -244318521 - MIR SINE MIR -57 151 33 400 267 50 69 chr2 6369702 6369904 -244317950 - L2 LINE L2 -5 3308 3111 338 326 45 2 chr2 6371716 6371835 -244316019 + MIR SINE MIR 38 157 -51 1603 164 60 38 chr2 6371836 6372201 -244315653 - THE1C LTR MaLR 0 375 3 9728 130 12 38 chr2 6372203 6373823 -244314031 - THE1C-int LTR MaLR 0 1580 3 1763 151 37 45 chr2 6373825 6374203 -244313651 - THE1C LTR MaLR 0 375 1 554 304 81 26 chr2 6375798 6376071 -244311783 + L2 LINE L2 2358 2645 -669 434 316 27 32 chr2 6376111 6376298 -244311556 + L2 LINE L2 3089 3274 -39 2324 90 0 3 chr2 6376302 6376613 -244311241 - AluSg SINE Alu 0 310 1 180 0 0 0 chr2 6377282 6377302 -244310552 + (T)n Simple_repeat Simple_repeat 1 20 0 2216 83 0 7 chr2 6377682 6377982 -244309872 - AluY SINE Alu -13 298 1 279 327 27 9 chr2 6378155 6378265 -244309589 - MIR SINE MIR -55 153 42 1751 210 87 2 chr2 6380176 6380591 -244307263 - L1MC3 LINE L1 -28 7757 7308 274 197 57 90 chr2 6380710 6380832 -244307022 - MLT1F1 LTR MaLR -437 130 13 3615 199 96 29 chr2 6380832 6381879 -244305975 - L1MC3 LINE L1 -710 7075 5893 639 217 71 11 chr2 6381894 6382078 -244305776 - L1MC1 LINE L1 -5 6328 6134 1098 205 29 29 chr2 6382085 6382358 -244305496 - MLT1A2 LTR MaLR -5 369 97 348 24 0 0 chr2 6382394 6382435 -244305419 + (CA)n Simple_repeat Simple_repeat 2 42 0 287 78 69 29 chr2 6382439 6382541 -244305313 + (TA)n Simple_repeat Simple_repeat 1 106 0 297 0 0 0 chr2 6382556 6382589 -244305265 + (CA)n Simple_repeat Simple_repeat 2 34 0 241 240 133 27 chr2 6382615 6382690 -244305164 - MLT1A2 LTR MaLR -304 86 4 2754 174 30 8 chr2 6382690 6383220 -244304634 - L1MC1 LINE L1 -196 6137 5590 397 272 30 53 chr2 6383561 6383730 -244304124 + MIR SINE MIR 67 231 -31 330 135 29 144 chr2 6383741 6383845 -244304009 - L1MC4 LINE L1 -1341 6981 1980 586 257 27 48 chr2 6384174 6384361 -244303493 - MER5A DNA MER1_type 0 189 7 208 274 50 69 chr2 6386019 6386130 -244301724 - MIR SINE MIR -97 111 2 2125 156 77 31 chr2 6387349 6387864 -244299990 - MLT2A2 LTR ERVL 0 554 1 328 263 135 0 chr2 6387877 6388010 -244299844 - MIR SINE MIR -14 248 98 1774 105 4 8 chr2 6388496 6388754 -244299100 + AluSc SINE Alu 39 295 -14 1684 174 43 40 chr2 6389684 6390099 -244297755 + L1MA9 LINE L1 5903 6311 -1 196 263 100 50 chr2 6390466 6390546 -244297308 + L2 LINE L2 3169 3252 -20 307 229 280 8 chr2 6391559 6391677 -244296177 + MIR SINE MIR 20 169 -93 205 151 38 0 chr2 6392810 6392863 -244294991 + (TA)n Simple_repeat Simple_repeat 2 56 0 2330 88 0 0 chr2 6393004 6393310 -244294544 + AluSq SINE Alu 1 306 -7 225 0 73 24 chr2 6393328 6393369 -244294485 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 1928 153 0 0 chr2 6393383 6393684 -244294170 + AluJo SINE Alu 3 303 -9 448 256 125 57 chr2 6393815 6393991 -244293863 + MIR SINE MIR 49 236 -26 206 294 147 71 chr2 6394227 6394465 -244293389 - L2 LINE L2 0 3272 3017 495 212 30 0 chr2 6394602 6394701 -244293153 + Tigger3b DNA MER2_type 1 102 -1129 * 4450 130 50 84 chr2 6394699 6395690 -244292164 + Tigger3b DNA MER2_type 274 1231 0 257 256 60 51 chr2 6395953 6396070 -244291784 + MIR3 SINE MIR 52 169 -39 292 358 73 0 chr2 6401954 6402077 -244285777 - L2 LINE L2 -20 3252 3121 291 316 52 29 chr2 6402200 6402336 -244285518 - MIR SINE MIR -113 149 11 555 283 46 5 chr2 6403138 6403357 -244284497 - L1MA9 LINE L1 -38 6274 6047 298 372 141 5 chr2 6403419 6403610 -244284244 + MIR SINE MIR 25 241 -21 192 343 15 0 chr2 6404244 6404311 -244283543 - MIR SINE MIR -1 261 194 224 307 107 60 chr2 6405137 6405287 -244282567 - MIR SINE MIR -13 249 93 412 313 79 18 chr2 6405886 6406116 -244281738 + MIR SINE MIR 13 252 -10 299 192 0 0 chr2 6406230 6406282 -244281572 + L2 LINE L2 3261 3312 -1 505 95 0 0 chr2 6408043 6408117 -244279737 + FLAM_A SINE Alu 69 142 0 192 97 0 0 chr2 6409289 6409320 -244278534 + (T)n Simple_repeat Simple_repeat 1 31 0 581 246 102 60 chr2 6410911 6411126 -244276728 + MER58A DNA MER1_type 1 224 0 261 254 17 0 chr2 6412838 6412897 -244274957 - L2 LINE L2 -18 3295 3236 275 210 16 0 chr2 6413967 6414029 -244273825 + Charlie8 DNA MER1_type 91 153 -2264 494 286 17 17 chr2 6414565 6414740 -244273114 + MARNA DNA Mariner 177 351 -235 191 393 0 11 chr2 6414748 6414837 -244273017 - MIR SINE MIR -8 254 167 377 281 12 69 chr2 6414944 6415104 -244272750 - MIR SINE MIR 0 262 112 201 250 0 0 chr2 6416180 6416240 -244271614 + T-rich Low_complexity Low_complexity 1 60 0 429 277 50 0 chr2 6416802 6416921 -244270933 - MLT1B LTR MaLR -2 388 264 2139 133 7 0 chr2 6417377 6417686 -244270168 + AluSx SINE Alu 1 311 -1 222 194 0 104 chr2 6420408 6420475 -244267379 + MER5B DNA MER1_type 109 168 -10 456 19 0 0 chr2 6422240 6422293 -244265561 + (TG)n Simple_repeat Simple_repeat 2 54 0 3499 121 13 26 chr2 6422633 6423164 -244264690 - MER1A DNA MER1_type 0 527 4 385 305 68 28 chr2 6423241 6423418 -244264436 - L2 LINE L2 -9 3304 3121 270 288 62 27 chr2 6423389 6423535 -244264319 - L2 LINE L2 -445 2869 2719 * 315 303 63 0 chr2 6423784 6423926 -244263928 - MER58A DNA MER1_type -31 193 43 528 193 37 9 chr2 6423926 6424035 -244263819 + L1MB8 LINE L1 6060 6171 -7 1443 214 49 45 chr2 6424382 6424831 -244263023 - MLT1C LTR MaLR -16 451 1 359 262 104 0 chr2 6425118 6425350 -244262504 - MLT1G1 LTR MaLR -12 583 236 688 90 0 0 chr2 6426179 6426268 -244261586 + AluSg/x SINE Alu 206 294 -15 237 213 133 0 chr2 6427396 6427471 -244260383 + MER112 DNA MER1_type 145 229 -31 182 306 94 12 chr2 6428820 6428905 -244258949 + MIR3 SINE MIR 110 201 -7 285 252 37 47 chr2 6429962 6430069 -244257785 - MIR3 SINE MIR -6 202 97 200 339 116 0 chr2 6430631 6430743 -244257111 + L2 LINE L2 3136 3260 -12 214 314 0 29 chr2 6430791 6430861 -244256993 + GA-rich Low_complexity Low_complexity 4 71 0 * 812 213 26 6 chr2 6430841 6431156 -244256698 + (TGGA)n Simple_repeat Simple_repeat 1 321 0 432 171 0 0 chr2 6431172 6431254 -244256600 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 767 154 15 12 chr2 6431276 6431545 -244256309 + (TGGA)n Simple_repeat Simple_repeat 1 270 0 758 148 11 33 chr2 6431563 6431746 -244256108 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 2399 101 0 0 chr2 6435063 6435370 -244252484 - AluSq SINE Alu -6 307 1 345 314 47 82 chr2 6437066 6437384 -244250470 - L2 LINE L2 -61 3211 2905 1701 209 64 9 chr2 6437484 6437920 -244249934 - MLT1C LTR MaLR -4 463 4 28 29 0 0 chr2 6439059 6439094 -244248760 + AT_rich Low_complexity Low_complexity 1 35 0 212 185 0 15 chr2 6439447 6439512 -244248342 + (TG)n Simple_repeat Simple_repeat 1 64 0 2322 92 45 0 chr2 6439517 6439852 -244248002 - THE1A LTR MaLR 0 355 6 194 295 253 24 chr2 6439961 6440127 -244247727 - MIR SINE MIR -19 243 40 263 306 34 54 chr2 6440558 6440705 -244247149 - MIR SINE MIR -76 186 43 215 333 66 68 chr2 6441097 6441463 -244246391 - L2 LINE L2 -13 3259 2895 204 296 19 0 chr2 6441465 6441519 -244246335 + L2 LINE L2 3259 3313 0 253 267 70 0 chr2 6441865 6441951 -244245903 + L3 LINE CR1 639 730 -847 2349 135 25 0 chr2 6442335 6442690 -244245164 + THE1B LTR MaLR 1 364 0 265 370 31 24 chr2 6443085 6443212 -244244642 - MIR SINE MIR -58 150 23 1667 108 0 0 chr2 6443807 6444019 -244243835 + AluSq SINE Alu 1 212 -101 291 312 88 35 chr2 6444522 6444692 -244243162 - MIR SINE MIR -71 191 13 216 0 0 0 chr2 6445039 6445063 -244242791 + (CA)n Simple_repeat Simple_repeat 2 25 0 445 227 62 0 chr2 6445375 6445472 -244242382 + MER5A DNA MER1_type 7 109 -80 891 260 149 6 chr2 6445510 6445845 -244242009 - MLT1E LTR MaLR 0 593 211 2348 135 75 96 chr2 6445913 6446504 -244241350 + LTR18B LTR ERVL 1 578 -36 213 121 0 0 chr2 6446528 6446561 -244241293 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 278 237 322 0 chr2 6446568 6446686 -244241168 - MLT1E LTR MaLR -435 158 3 353 237 0 0 chr2 6446766 6446842 -244241012 + MLT1A1 LTR MaLR 1 76 -289 823 178 76 11 chr2 6446875 6447060 -244240794 + MLT1A1 LTR MaLR 169 365 0 461 336 132 40 chr2 6447101 6447841 -244240013 + L2 LINE L2 1812 2619 -695 190 232 58 58 chr2 6447862 6447931 -244239923 - L3 LINE CR1 -329 1248 1180 216 288 17 0 chr2 6449476 6449535 -244238319 + L2 LINE L2 3248 3307 -6 279 275 72 51 chr2 6449622 6449760 -244238094 + MIR3 SINE MIR 2 142 -66 878 259 92 28 chr2 6450593 6451123 -244236731 - L1MC5 LINE L1 -47 7914 7351 2390 85 3 0 chr2 6451266 6451559 -244236295 + AluY SINE Alu 1 294 -17 235 300 29 0 chr2 6452342 6452412 -244235442 + CT-rich Low_complexity Low_complexity 6 77 0 729 275 81 95 chr2 6454135 6454651 -244233203 - MLT1H LTR MaLR 0 549 41 210 71 0 0 chr2 6454698 6454726 -244233128 + (A)n Simple_repeat Simple_repeat 1 28 0 375 330 107 23 chr2 6455558 6456036 -244231818 - L2 LINE L2 -912 2402 1885 1778 187 51 48 chr2 6456054 6456449 -244231405 - MSTD LTR MaLR 0 396 1 418 325 0 0 chr2 6457264 6457381 -244230473 - MIR SINE MIR -5 257 141 232 121 0 0 chr2 6457626 6457659 -244230195 + MER31B LTR ERV1 1 33 -433 428 258 10 33 chr2 6457661 6457827 -244230027 + MER31A-int LTR ERV1 3082 3768 -2178 * 8356 178 50 44 chr2 6457806 6458280 -244229574 + MER31A-int LTR ERV1 3102 3572 -1364 2457 81 0 0 chr2 6458280 6458587 -244229267 - AluY SINE Alu -4 307 1 8356 178 50 44 chr2 6458587 6459917 -244227937 + MER31A-int LTR ERV1 3572 4916 -20 2549 153 26 52 chr2 6459917 6460415 -244227439 + MER31A LTR ERV1 1 485 0 356 294 137 0 chr2 6461167 6461313 -244226541 - MIR SINE MIR -78 184 19 217 336 0 28 chr2 6461663 6461806 -244226048 + CT-rich Low_complexity Low_complexity 4 142 0 1224 180 0 14 chr2 6462369 6462586 -244225268 - AluJb SINE Alu -13 299 86 1532 192 44 101 chr2 6462681 6463133 -244224721 + MLT1C LTR MaLR 1 424 -43 2359 96 0 3 chr2 6463133 6463436 -244224418 - AluSx SINE Alu -10 302 1 1532 192 44 101 chr2 6463436 6463478 -244224376 + MLT1C LTR MaLR 424 467 0 284 332 73 32 chr2 6463629 6463849 -244224005 + MIR SINE MIR 21 249 -13 1019 240 40 49 chr2 6463902 6464231 -244223623 + MLT2C1 LTR ERVL 6 331 -66 861 182 6 0 chr2 6464292 6464457 -244223397 + MLT1C-int LTR MaLR 22 187 -1184 * 962 221 103 0 chr2 6464454 6464658 -244223196 + MLT1C-int LTR MaLR 341 565 -806 301 301 170 20 chr2 6464808 6464961 -244222893 + L2 LINE L2 3097 3272 0 256 346 110 39 chr2 6465240 6465575 -244222279 + L2 LINE L2 2826 3184 -88 306 235 37 12 chr2 6465620 6465701 -244222153 + MER91B DNA MER1_type 57 139 -51 374 256 0 0 chr2 6465860 6465946 -244221908 - MIR SINE MIR -1 261 176 190 280 147 0 chr2 6466241 6466316 -244221538 + L2 LINE L2 3193 3278 -35 331 303 49 33 chr2 6466826 6466948 -244220906 + L2 LINE L2 3134 3257 -15 442 176 0 20 chr2 6466954 6467056 -244220798 + GA-rich Low_complexity Low_complexity 1 100 0 629 246 154 71 chr2 6467248 6467586 -244220268 - MLT1G3 LTR MaLR -42 488 123 900 216 98 98 chr2 6467590 6467949 -244219905 + MSTC LTR MaLR 1 412 -16 3158 81 0 3 chr2 6468394 6468779 -244219075 - L1PA7 LINE L1 -13 6141 5758 225 217 0 0 chr2 6469314 6469360 -244218494 - L1ME LINE L1 -500 5621 5576 1209 196 56 49 chr2 6469450 6469756 -244218098 - MLT2B3 LTR ERVL 0 554 247 192 296 182 11 chr2 6470485 6470573 -244217281 - MIR SINE MIR -72 136 34 254 333 43 17 chr2 6472005 6472122 -244215732 - MIR SINE MIR -112 150 31 1553 205 32 46 chr2 6472217 6472587 -244215267 + MLT1A1 LTR MaLR 1 365 0 379 309 9 0 chr2 6473335 6473445 -244214409 + L2 LINE L2 3200 3310 -3 223 197 0 42 chr2 6473690 6473761 -244214093 + G-rich Low_complexity Low_complexity 2 69 0 1630 148 65 0 chr2 6475289 6475552 -244212302 + AluSx SINE Alu 1 280 -32 385 326 85 35 chr2 6477302 6477679 -244210175 + L1ME LINE L1 5429 5824 -297 420 229 14 25 chr2 6478069 6478210 -244209644 - MLT1G1 LTR MaLR -400 195 3 361 167 0 0 chr2 6478211 6478271 -244209583 - MER112 DNA MER1_type -193 67 8 303 257 112 26 chr2 6478623 6478775 -244209079 - L1ME LINE L1 -380 5741 5577 184 351 43 32 chr2 6479516 6479610 -244208244 - L2 LINE L2 -230 3042 2948 240 86 0 0 chr2 6481623 6481658 -244206196 + (CCTG)n Simple_repeat Simple_repeat 2 36 0 2168 261 93 53 chr2 6481983 6483215 -244204639 + L1ME2 LINE L1 3281 4684 -1462 353 83 0 0 chr2 6483215 6483263 -244204591 - MADE1 DNA Mariner 0 80 33 2168 261 93 53 chr2 6483263 6483373 -244204481 + L1ME2 LINE L1 4684 4788 -1358 1143 236 24 39 chr2 6483381 6483712 -244204142 + MER58B DNA MER1_type 1 326 -15 1388 267 65 49 chr2 6483727 6484882 -244202972 + L1ME2 LINE L1 4791 5921 -243 1605 102 56 0 chr2 6484882 6485098 -244202756 + MER30 DNA MER1_type 3 230 0 1388 267 65 49 chr2 6485098 6485207 -244202647 + L1ME2 LINE L1 5921 6027 -137 1108 205 120 83 chr2 6485421 6485796 -244202058 + MLT1B LTR MaLR 2 390 0 902 196 30 0 chr2 6485838 6486006 -244201848 - MER58B DNA MER1_type -1 340 168 2788 244 54 15 chr2 6486368 6487287 -244200567 + L1PA12 LINE L1 2254 3065 -4509 12496 233 17 37 chr2 6487288 6490797 -244197057 - L1P LINE L1 -1082 5064 1627 271 263 25 0 chr2 6491293 6491373 -244196481 + MER103 DNA DNA 7 88 -78 288 170 0 0 chr2 6492029 6492082 -244195772 + (TG)n Simple_repeat Simple_repeat 1 53 0 346 311 115 52 chr2 6492257 6492527 -244195327 + L1M2a LINE L1 1041 1327 -5841 319 324 29 0 chr2 6493524 6493626 -244194228 - MIR SINE MIR -62 200 96 1998 138 17 3 chr2 6494742 6495040 -244192814 + AluJb SINE Alu 1 302 -10 28 0 0 0 chr2 6495091 6495119 -244192735 + AT_rich Low_complexity Low_complexity 1 28 0 660 151 95 0 chr2 6495347 6495473 -244192381 - L1MA9 LINE L1 0 6312 6175 208 148 0 37 chr2 6495479 6495533 -244192321 + (TTCC)n Simple_repeat Simple_repeat 3 54 0 226 213 0 0 chr2 6495542 6495589 -244192265 - L1MA9 LINE L1 -147 6165 6119 369 149 0 0 chr2 6496259 6496326 -244191528 + (TG)n Simple_repeat Simple_repeat 1 67 0 4541 132 7 11 chr2 6496543 6497257 -244190597 + MER50 LTR ERV1 1 711 -23 323 309 152 25 chr2 6497274 6497630 -244190224 - L2 LINE L2 -696 2618 2218 2188 119 0 0 chr2 6498019 6498314 -244189540 - AluSx SINE Alu -17 295 1 3940 157 31 37 chr2 6498747 6499485 -244188369 - MER50 LTR ERV1 0 734 1 256 294 56 40 chr2 6499494 6499620 -244188234 - L2 LINE L2 -512 2802 2675 880 144 20 0 chr2 6500917 6501063 -244186791 - L1MA5A LINE L1 0 6297 6149 261 293 0 37 chr2 6501406 6501488 -244186366 + MIR SINE MIR 38 116 -92 2210 118 43 38 chr2 6501988 6502361 -244185493 + THE1C LTR MaLR 1 375 0 454 315 55 22 chr2 6502963 6503328 -244184526 - L1M4 LINE L1 -2164 3982 3606 188 65 0 32 chr2 6503336 6503367 -244184487 + (TCC)n Simple_repeat Simple_repeat 3 32 0 349 280 73 7 chr2 6503698 6503848 -244184006 - L1M4 LINE L1 -2922 3224 3065 219 311 104 55 chr2 6504381 6504476 -244183378 + MIR SINE MIR 57 146 -116 2185 131 0 0 chr2 6504476 6504782 -244183072 - AluSq SINE Alu -7 306 1 219 311 104 55 chr2 6504782 6504869 -244182985 + MIR SINE MIR 146 248 -14 238 247 0 71 chr2 6505088 6505173 -244182681 + T-rich Low_complexity Low_complexity 2 80 0 315 113 0 0 chr2 6505589 6505642 -244182212 + (TG)n Simple_repeat Simple_repeat 2 54 0 2156 126 70 17 chr2 6507083 6507439 -244180415 + THE1C LTR MaLR 1 375 0 1826 153 0 0 chr2 6507821 6508115 -244179739 + AluSx SINE Alu 22 315 0 212 318 115 27 chr2 6508165 6508313 -244179541 - MIR3 SINE MIR -45 163 3 350 333 60 18 chr2 6509678 6509846 -244178008 + MER5B DNA MER1_type 1 175 -3 332 250 20 60 chr2 6511214 6511314 -244176540 + MIR SINE MIR 50 145 -63 252 122 0 0 chr2 6511972 6512013 -244175841 + (TG)n Simple_repeat Simple_repeat 2 42 0 198 333 42 14 chr2 6513023 6513095 -244174759 + L2 LINE L2 3016 3089 -183 2278 84 0 37 chr2 6513120 6513442 -244174412 - AluSg SINE Alu 0 310 1 822 144 106 48 chr2 6513537 6513612 -244174242 + THE1C LTR MaLR 1 70 -305 2661 112 14 16 chr2 6513612 6513977 -244173877 + THE1B LTR MaLR 1 364 0 822 144 106 48 chr2 6513977 6514109 -244173745 + THE1C LTR MaLR 70 220 -155 366 23 0 0 chr2 6514583 6514626 -244173228 + (CA)n Simple_repeat Simple_repeat 1 43 0 1301 186 13 13 chr2 6514642 6514878 -244172976 + MER46A DNA MER2_type 1 236 0 495 239 117 35 chr2 6514988 6515218 -244172636 - HAL1 LINE L1 -10 2497 2249 760 318 64 41 chr2 6515305 6516013 -244171841 - HAL1 LINE L1 -533 1974 1251 361 233 0 33 chr2 6516034 6516124 -244171730 - HAL1 LINE L1 -1355 1152 1066 1321 247 98 43 chr2 6516184 6516654 -244171200 - MLT1D LTR MaLR -9 496 1 251 309 34 7 chr2 6516678 6516827 -244171027 - HAL1 LINE L1 -1189 1318 1166 1168 239 97 50 chr2 6516950 6517489 -244170365 - HAL1 LINE L1 -1313 1194 631 387 281 87 20 chr2 6518790 6518986 -244168868 - MIR SINE MIR -13 249 41 21 0 0 0 chr2 6519241 6519262 -244168592 + AT_rich Low_complexity Low_complexity 1 21 0 35 0 0 0 chr2 6520230 6520265 -244167589 + AT_rich Low_complexity Low_complexity 1 35 0 210 106 47 35 chr2 6520272 6520357 -244167497 + (TATAA)n Simple_repeat Simple_repeat 5 90 0 23 0 0 0 chr2 6520360 6520383 -244167471 + AT_rich Low_complexity Low_complexity 1 23 0 227 346 79 0 chr2 6521971 6522072 -244165782 - MIR SINE MIR -84 124 16 668 64 0 32 chr2 6522631 6522725 -244165129 - L1PA8 LINE L1 0 6172 6082 317 128 0 0 chr2 6522725 6522772 -244165082 - L1PA8 LINE L1 -44 6128 6082 345 85 0 0 chr2 6522772 6522819 -244165035 - L1PA8A LINE L1 -42 6089 6043 * 380 56 0 153 chr2 6522794 6522866 -244164988 - L1PA8 LINE L1 -30 6142 6082 353 64 0 0 chr2 6522866 6522913 -244164941 - L1PA8 LINE L1 -44 6128 6082 354 104 0 0 chr2 6522913 6522961 -244164893 - L1PA8 LINE L1 -44 6128 6081 377 43 0 0 chr2 6522961 6523007 -244164847 - L1PA8 LINE L1 -45 6127 6082 * 380 56 0 153 chr2 6522982 6523054 -244164800 - L1PA8 LINE L1 -30 6142 6082 329 110 0 151 chr2 6523029 6523102 -244164752 - L1PA8 LINE L1 -30 6142 6081 * 377 43 0 0 chr2 6523102 6523148 -244164706 - L1PA8 LINE L1 -45 6127 6082 367 69 0 153 chr2 6523123 6523195 -244164659 - L1PA8A LINE L1 -28 6103 6043 * 752 74 0 90 chr2 6523170 6523292 -244164562 - L1PA8 LINE L1 -30 6142 6032 382 339 32 27 chr2 6523514 6523700 -244164154 + MIR SINE MIR 50 236 -26 267 311 48 10 chr2 6524019 6524122 -244163732 - MIR SINE MIR -150 112 6 993 304 127 32 chr2 6524227 6524907 -244162947 + L2 LINE L2 2112 2855 -459 310 309 77 101 chr2 6525293 6525810 -244162044 + L2 LINE L2 2809 3313 0 298 217 158 33 chr2 6526940 6527060 -244160794 + L2 LINE L2 2235 2369 -945 366 309 144 45 chr2 6527745 6527946 -244159908 + L1MEd LINE L1 411 631 -5488 410 282 0 10 chr2 6528238 6528341 -244159513 - MER5A DNA MER1_type -79 110 9 563 247 20 13 chr2 6528375 6528525 -244159329 - MLT1E2 LTR MaLR -3 623 473 2605 138 4 5 chr2 6528619 6529068 -244158786 - L1P LINE L1 -1544 4602 4158 1880 253 109 20 chr2 6529077 6529790 -244158064 - L1ME1 LINE L1 -17 6149 5373 296 209 43 87 chr2 6529799 6529822 -244158032 - L1ME1 LINE L1 -846 5300 5278 2290 77 0 3 chr2 6529822 6530108 -244157746 + L1PA6 LINE L1 5870 6154 0 296 209 43 87 chr2 6530108 6530199 -244157655 - L1ME1 LINE L1 -868 5278 5191 * 8082 158 49 33 chr2 6530193 6530673 -244157181 + L1MCa LINE L1 69 540 -5886 1562 175 44 34 chr2 6530673 6530970 -244156884 - AluJo SINE Alu -12 300 1 8082 158 49 33 chr2 6530970 6531900 -244155954 + L1MCa LINE L1 540 1509 -4917 2494 146 41 7 chr2 6531900 6532311 -244155543 + MSTA LTR MaLR 1 425 -3 8082 158 49 33 chr2 6532311 6532451 -244155403 + L1MCa LINE L1 1509 1645 -4781 1213 268 51 28 chr2 6532456 6532949 -244154905 - L1ME1 LINE L1 -2362 3784 3281 400 167 14 0 chr2 6532956 6533028 -244154826 - 7SK RNA RNA 0 193 121 604 152 0 9 chr2 6533064 6533176 -244154678 - 7SK RNA RNA -68 125 15 6213 64 7 7 chr2 6533177 6534296 -244153558 + L1PA7 LINE L1 4918 6039 -115 1006 263 92 46 chr2 6534455 6534941 -244152913 - MLT1E LTR MaLR 0 593 103 569 194 0 0 chr2 6534927 6535020 -244152834 - MLT1E LTR MaLR -449 144 52 * 239 139 0 0 chr2 6535430 6535466 -244152388 + L1P LINE L1 5224 5259 -887 246 357 7 50 chr2 6536927 6537067 -244150787 - MIR SINE MIR -51 211 78 258 282 24 73 chr2 6537218 6537342 -244150512 - L2 LINE L2 -218 3054 2937 194 286 62 71 chr2 6537719 6537831 -244150023 - L2 LINE L2 -11 3302 3192 2446 74 0 0 chr2 6538561 6538857 -244148997 + AluSg SINE Alu 1 296 -14 2015 141 0 0 chr2 6539172 6539470 -244148384 - AluSx SINE Alu -14 298 1 2180 126 7 0 chr2 6539847 6540149 -244147705 - AluSq SINE Alu -9 304 1 1206 95 0 0 chr2 6540162 6540320 -244147534 - AluY SINE Alu -8 303 146 321 293 34 27 chr2 6540959 6541106 -244146748 - MLT1I LTR MaLR -2 407 260 911 188 73 5 chr2 6542669 6542861 -244144993 + MLT2C1 LTR ERVL 1 205 -192 798 226 68 30 chr2 6542842 6543076 -244144778 + MLT1C LTR MaLR 225 467 0 * 6047 264 77 23 chr2 6543630 6546128 -244141726 + L1MEc LINE L1 46 2644 -3571 2363 189 38 2 chr2 6547235 6547652 -244140202 - MSTB1 LTR MaLR 0 432 1 2530 149 28 28 chr2 6548215 6548643 -244139211 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr2 6550146 6550168 -244137686 + AT_rich Low_complexity Low_complexity 1 22 0 1265 221 164 45 chr2 6550183 6550706 -244137148 - L1MC2 LINE L1 0 7970 6186 281 218 30 69 chr2 6550706 6550807 -244137047 - MLT1I LTR MaLR -436 131 35 724 143 45 112 chr2 6550825 6551048 -244136806 - L1MC3 LINE L1 -706 7079 6872 204 40 0 0 chr2 6551058 6551083 -244136771 + (TATATG)n Simple_repeat Simple_repeat 4 28 0 246 32 0 0 chr2 6551089 6551120 -244136734 + (CA)n Simple_repeat Simple_repeat 2 32 0 1365 217 75 63 chr2 6551120 6551620 -244136234 - L1MC3 LINE L1 -1230 6555 6050 5677 176 118 101 chr2 6551657 6552247 -244135607 - L1MCa LINE L1 -4184 2242 1663 186 43 0 0 chr2 6552247 6552270 -244135584 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5677 176 118 101 chr2 6552270 6553633 -244134221 - L1MCa LINE L1 -4763 1663 256 314 292 34 0 chr2 6553730 6553819 -244134035 - L1MC4 LINE L1 -1339 6703 6612 418 168 15 23 chr2 6553820 6553951 -244133903 + (TA)n Simple_repeat Simple_repeat 1 130 0 1649 182 3 20 chr2 6553956 6554252 -244133602 - AluJb SINE Alu -21 291 1 252 395 8 8 chr2 6555271 6555405 -244132449 - MIR3 SINE MIR -38 170 37 385 314 108 10 chr2 6556262 6556456 -244131398 - MIR SINE MIR 0 262 50 300 198 42 18 chr2 6556848 6557015 -244130839 + (TAGA)n Simple_repeat Simple_repeat 3 173 0 466 140 20 0 chr2 6557177 6557277 -244130577 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 1890 153 10 0 chr2 6558017 6558325 -244129529 - AluSx SINE Alu -1 311 1 195 114 0 0 chr2 6558770 6558805 -244129049 + (CTTA)n Simple_repeat Simple_repeat 2 36 0 229 250 0 0 chr2 6559155 6559203 -244128651 - MIR SINE MIR -129 79 32 23 0 0 0 chr2 6559636 6559659 -244128195 + AT_rich Low_complexity Low_complexity 1 23 0 494 16 16 0 chr2 6562262 6562325 -244125529 + (TC)n Simple_repeat Simple_repeat 2 65 0 558 303 90 10 chr2 6562675 6562975 -244124879 + L2 LINE L2 1984 2307 -1007 198 244 22 0 chr2 6563262 6563307 -244124547 + MIR3 SINE MIR 135 180 -28 1107 233 51 10 chr2 6563436 6563732 -244124122 + MLT1C LTR MaLR 152 459 -8 290 321 18 28 chr2 6563741 6563850 -244124004 + L2 LINE L2 2344 2451 -863 506 340 36 57 chr2 6563954 6564289 -244123565 + L2 LINE L2 2986 3313 0 1371 101 48 18 chr2 6564936 6565163 -244122691 - L1MA8 LINE L1 -6 6285 6052 239 342 82 6 chr2 6565401 6565559 -244122295 - MIR SINE MIR -55 207 38 1720 185 44 15 chr2 6566082 6566366 -244121488 + MLT2B2 LTR ERVL 1 275 -279 207 0 0 0 chr2 6566366 6566389 -244121465 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1720 185 44 15 chr2 6566389 6566529 -244121325 + MLT2B2 LTR ERVL 275 410 -144 986 54 42 0 chr2 6566529 6566696 -244121158 + (TCTA)n Simple_repeat Simple_repeat 4 177 0 1720 185 44 15 chr2 6566696 6566714 -244121140 + MLT2B2 LTR ERVL 410 552 -2 1119 40 0 0 chr2 6567582 6567707 -244120147 + AluY SINE Alu 1 125 -186 9985 26 2 1 chr2 6567707 6569644 -244118210 + L1PA3 LINE L1 4230 6169 0 2143 123 0 19 chr2 6569659 6569968 -244117886 + AluSx SINE Alu 3 305 -7 319 186 0 17 chr2 6569978 6570037 -244117817 - LTR67 LTR ERVL -86 471 414 435 153 153 0 chr2 6570087 6570172 -244117682 - MER53 DNA DNA -91 98 1 252 246 15 0 chr2 6570385 6570450 -244117404 + L1ME LINE L1 5367 5432 -732 386 221 271 0 chr2 6570477 6570599 -244117255 + MIR SINE MIR 12 166 -96 2196 102 3 0 chr2 6570649 6570953 -244116901 - AluSp SINE Alu -3 310 6 377 260 21 10 chr2 6571028 6571124 -244116730 + L2 LINE L2 39 135 -3179 2730 167 28 28 chr2 6571151 6571695 -244116159 + L1MC3 LINE L1 7241 7784 -1 23 0 0 0 chr2 6571695 6571718 -244116136 + AT_rich Low_complexity Low_complexity 1 23 0 1595 62 0 0 chr2 6571718 6571910 -244115944 + AluY SINE Alu 118 309 -2 315 0 0 0 chr2 6571916 6571951 -244115903 + (TAA)n Simple_repeat Simple_repeat 2 36 0 349 267 139 0 chr2 6572842 6572943 -244114911 + MER5B DNA MER1_type 4 118 -60 948 182 61 22 chr2 6573404 6573635 -244114219 - LTR32 LTR ERVL 0 471 232 279 203 78 0 chr2 6573617 6573681 -244114173 - LTR32 LTR ERVL -400 71 3 * 334 257 83 0 chr2 6573687 6573796 -244114058 - L2 LINE L2 -79 3234 3117 794 192 46 0 chr2 6574244 6574395 -244113459 + MER97a DNA MER1_type? 19 176 -718 1345 101 0 0 chr2 6575149 6575317 -244112537 + AluSc SINE Alu 134 301 -8 912 336 126 19 chr2 6575455 6576140 -244111714 - ERVL LTR ERVL -284 5480 4723 206 328 48 40 chr2 6576709 6576834 -244111020 - MIR SINE MIR -59 203 78 279 243 57 0 chr2 6576958 6577028 -244110826 + MER91B DNA MER1_type 6 79 -111 301 179 18 0 chr2 6578104 6578160 -244109694 + MER91B DNA MER1_type 6 62 -128 204 313 51 21 chr2 6578854 6578990 -244108864 + MIR SINE MIR 3 135 -73 21 0 0 0 chr2 6579009 6579030 -244108824 + AT_rich Low_complexity Low_complexity 1 21 0 2258 104 44 41 chr2 6579473 6579839 -244108015 + THE1C LTR MaLR 5 371 -4 581 277 116 31 chr2 6580059 6580351 -244107503 + LTR33 LTR ERVL 205 521 0 1066 81 0 0 chr2 6580444 6580580 -244107274 + AluY SINE Alu 173 308 -3 351 239 0 0 chr2 6580797 6580927 -244106927 + (TG)n Simple_repeat Simple_repeat 2 131 0 579 239 3 0 chr2 6580949 6581306 -244106548 + (TG)n Simple_repeat Simple_repeat 1 358 0 252 305 162 0 chr2 6581956 6582110 -244105744 - MIR3 SINE MIR -9 199 21 1188 196 46 39 chr2 6584167 6584447 -244103407 + AluJo SINE Alu 1 282 -30 3242 190 137 112 chr2 6584517 6585036 -244102818 + L1MC3 LINE L1 6566 7070 -715 263 294 20 10 chr2 6585036 6585138 -244102716 + MLT1F1 LTR MaLR 29 131 -436 3242 190 137 112 chr2 6585138 6585696 -244102158 + L1MC3 LINE L1 7070 7774 -11 267 365 19 0 chr2 6585701 6585808 -244102046 - L2 LINE L2 -15 3298 3190 417 330 57 24 chr2 6586312 6586524 -244101330 + MIR SINE MIR 14 232 -30 477 0 0 0 chr2 6586735 6586788 -244101066 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 185 0 40 0 chr2 6586787 6586812 -244101042 + (TAA)n Simple_repeat Simple_repeat 2 27 0 * 1301 268 49 12 chr2 6587134 6587544 -244100310 + LTR16C LTR ERVL 67 491 0 3366 187 101 41 chr2 6587763 6588612 -244099242 - L1MA4 LINE L1 -1 6299 5400 1084 103 5 19 chr2 6589890 6590380 -244097474 + (TCCA)n Simple_repeat Simple_repeat 1 666 0 289 316 129 84 chr2 6591333 6591558 -244096296 - L2 LINE L2 -8 3264 3030 261 353 181 23 chr2 6591706 6591839 -244096015 - L2 LINE L2 -8 3264 3111 388 398 25 0 chr2 6592311 6592472 -244095382 - L2 LINE L2 -1 3271 3107 637 91 20 0 chr2 6594028 6594127 -244093727 - L1MA10 LINE L1 0 6334 6234 1695 161 0 28 chr2 6596335 6596649 -244091205 - AluJb SINE Alu 0 307 2 186 292 31 0 chr2 6597110 6597175 -244090679 - MIR SINE MIR -70 192 126 1721 184 5 89 chr2 6599590 6599779 -244088075 + MER57A LTR ERV1 1 134 -269 2071 143 23 52 chr2 6599779 6600164 -244087690 + THE1C LTR MaLR 1 374 -1 1721 184 5 89 chr2 6600164 6600414 -244087440 + MER57A LTR ERV1 134 403 0 242 240 125 87 chr2 6601260 6601582 -244086272 + L1ME4a LINE L1 5584 5927 -194 207 0 0 0 chr2 6601582 6601605 -244086249 + (TG)n Simple_repeat Simple_repeat 2 24 0 242 240 125 87 chr2 6601605 6601698 -244086156 + L1ME4a LINE L1 5927 6015 -106 22 35 0 0 chr2 6601755 6601784 -244086070 + AT_rich Low_complexity Low_complexity 1 29 0 393 276 91 73 chr2 6601866 6602154 -244085700 - L1MEd LINE L1 -4867 1252 971 1596 180 16 32 chr2 6602154 6602470 -244085384 - AluJo SINE Alu -1 311 1 393 276 91 73 chr2 6602470 6602743 -244085111 - L1MEd LINE L1 -5148 971 681 1807 236 31 8 chr2 6603391 6603776 -244084078 + MSTD LTR MaLR 1 394 -2 453 293 47 22 chr2 6603818 6604050 -244083804 + L1MC/D LINE L1 5584 5821 -1987 767 301 0 0 chr2 6604051 6604254 -244083600 + MER63A DNA MER1_type 1 203 -7 1625 147 0 96 chr2 6604384 6604698 -244083156 + AluJo SINE Alu 3 286 -26 24 32 0 0 chr2 6604966 6604997 -244082857 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 6605272 6605300 -244082554 + AT_rich Low_complexity Low_complexity 1 28 0 1613 202 71 49 chr2 6605306 6605672 -244082182 + MLT1A2 LTR MaLR 1 374 0 628 49 24 0 chr2 6607726 6607808 -244080046 - L1PA10 LINE L1 -8 6160 6077 242 35 0 0 chr2 6607809 6607838 -244080016 + L1PA10 LINE L1 6020 6048 -120 5657 273 47 66 chr2 6608146 6609229 -244078625 - L2 LINE L2 -405 2909 1806 315 0 0 0 chr2 6609229 6609264 -244078590 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1509 173 24 12 chr2 6609267 6609516 -244078338 - AluJb SINE Alu -30 282 31 564 195 0 0 chr2 6609516 6609598 -244078256 - AluJ/FLAM SINE Alu -228 84 3 5657 273 47 66 chr2 6609598 6609673 -244078181 - L2 LINE L2 -1509 1805 1730 1952 126 31 0 chr2 6609673 6609959 -244077895 + AluSx SINE Alu 17 311 -1 5657 273 47 66 chr2 6609959 6611057 -244076797 - L2 LINE L2 -1584 1730 612 223 385 62 26 chr2 6611220 6611412 -244076442 + L2 LINE L2 2652 2850 -464 326 303 92 17 chr2 6612169 6612288 -244075566 - MIR SINE MIR -60 148 21 180 0 0 0 chr2 6613273 6613293 -244074561 + (A)n Simple_repeat Simple_repeat 1 20 0 902 107 61 0 chr2 6613904 6614035 -244073819 + MER85 DNA T2_type 1 139 0 272 311 145 25 chr2 6615208 6615589 -244072265 + MLT1J LTR MaLR 35 509 -2 2133 171 97 13 chr2 6615981 6616374 -244071480 + MSTB LTR MaLR 1 426 0 1818 144 3 56 chr2 6616540 6616860 -244070994 + AluJb SINE Alu 1 303 -9 249 108 0 0 chr2 6616860 6616897 -244070957 + (TG)n Simple_repeat Simple_repeat 1 37 0 194 385 15 22 chr2 6617033 6617168 -244070686 - L2 LINE L2 -534 2780 2647 181 216 54 0 chr2 6618296 6618333 -244069521 + L2 LINE L2 3182 3220 -93 1820 214 23 3 chr2 6619370 6619721 -244068133 - MLT1A1 LTR MaLR -1 364 7 1634 174 59 3 chr2 6620474 6620762 -244067092 - AluJb SINE Alu -8 304 1 222 190 17 17 chr2 6620803 6620861 -244066993 + A-rich Low_complexity Low_complexity 5 62 0 533 277 34 0 chr2 6620872 6621020 -244066834 - MIR SINE MIR -108 154 2 240 143 0 0 chr2 6621755 6621797 -244066057 + (TA)n Simple_repeat Simple_repeat 1 42 0 56 16 0 0 chr2 6621844 6621907 -244065947 + AT_rich Low_complexity Low_complexity 1 63 0 1436 182 0 0 chr2 6622008 6622255 -244065599 - MER57A LTR ERV1 0 403 157 1872 149 10 7 chr2 6624651 6624939 -244062915 - AluSx SINE Alu -23 289 1 187 241 74 19 chr2 6625063 6625117 -244062737 + L2 LINE L2 3195 3251 -21 191 330 80 18 chr2 6625140 6625252 -244062602 - L2 LINE L2 -6 3307 3189 2153 135 0 0 chr2 6625537 6625834 -244062020 - AluSx SINE Alu -15 297 1 360 316 0 0 chr2 6625869 6625964 -244061890 + L2 LINE L2 3174 3268 -4 1975 193 51 22 chr2 6626028 6626442 -244061412 + MSTB LTR MaLR 1 426 0 308 159 0 16 chr2 6627232 6627295 -244060559 + (TG)n Simple_repeat Simple_repeat 2 63 0 268 278 144 0 chr2 6629237 6629334 -244058520 - MIR SINE MIR -75 187 77 1651 154 7 54 chr2 6629508 6629806 -244058048 + AluJo SINE Alu 5 288 -24 237 65 0 0 chr2 6629967 6629998 -244057856 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr2 6630019 6630040 -244057814 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 576 29 0 0 chr2 6630039 6630109 -244057745 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 192 40 0 0 chr2 6630132 6630157 -244057697 + (GA)n Simple_repeat Simple_repeat 2 26 0 22 35 0 0 chr2 6630201 6630230 -244057624 + AT_rich Low_complexity Low_complexity 1 29 0 234 282 26 13 chr2 6630903 6630981 -244056873 + MIR3 SINE MIR 100 178 -30 22 0 0 0 chr2 6631267 6631289 -244056565 + AT_rich Low_complexity Low_complexity 1 22 0 2281 96 0 7 chr2 6632231 6632532 -244055322 + AluY SINE Alu 1 299 -12 21 0 0 0 chr2 6634680 6634701 -244053153 + AT_rich Low_complexity Low_complexity 1 21 0 2270 118 0 0 chr2 6634858 6635162 -244052692 + AluSx SINE Alu 2 305 -7 207 125 0 0 chr2 6635924 6635964 -244051890 + (T)n Simple_repeat Simple_repeat 1 40 0 22 43 0 21 chr2 6635973 6636003 -244051851 + AT_rich Low_complexity Low_complexity 1 31 -15 2945 102 67 9 chr2 6636003 6636452 -244051402 - L1PB1 LINE L1 -3 6148 5674 22 43 0 21 chr2 6636452 6636468 -244051386 + AT_rich Low_complexity Low_complexity 31 46 0 2754 30 0 0 chr2 6636468 6636771 -244051083 - L1PA5 LINE L1 -11 6143 5841 235 293 57 19 chr2 6637315 6637421 -244050433 - L1MDa LINE L1 -4643 1897 1788 30 0 0 0 chr2 6637626 6637656 -244050198 + AT_rich Low_complexity Low_complexity 1 30 0 2901 194 55 5 chr2 6638464 6639042 -244048812 + MER82 DNA MER2_type 47 653 0 245 336 50 29 chr2 6639066 6639206 -244048648 + MIR3 SINE MIR 16 158 -50 7274 160 11 27 chr2 6639310 6639992 -244047862 - HSMAR2 DNA Mariner -2 1300 648 2113 128 3 0 chr2 6639992 6640290 -244047564 + AluSc SINE Alu 10 308 -1 7274 160 11 27 chr2 6640290 6640919 -244046935 - HSMAR2 DNA Mariner -654 648 10 312 227 40 13 chr2 6641409 6641484 -244046370 + MER5A DNA MER1_type 30 106 -83 402 312 26 21 chr2 6642101 6642290 -244045564 - MIR SINE MIR 0 262 73 442 286 23 15 chr2 6643344 6643477 -244044377 + MIR3 SINE MIR 75 208 0 317 304 62 0 chr2 6644842 6644954 -244042900 + MER34 LTR ERV1 1 119 -423 * 1477 265 78 13 chr2 6644943 6645407 -244042447 + LTR48B LTR ERV1 151 644 0 2289 175 144 45 chr2 6645810 6646388 -244041466 + LTR24C LTR ERV1 1 635 0 204 213 43 0 chr2 6647221 6647268 -244040586 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 241 251 5 0 chr2 6647844 6647924 -244039930 + MIR SINE MIR 97 178 -30 1678 190 14 3 chr2 6648272 6648562 -244039292 - AluJo SINE Alu -18 294 2 218 312 80 14 chr2 6648970 6649108 -244038746 + MIR SINE MIR 70 216 -46 215 288 68 0 chr2 6649212 6649285 -244038569 - MIR SINE MIR -95 167 90 13096 134 28 122 chr2 6649583 6652345 -244035509 + L1PA15-16 LINE L1 2 2502 -4347 1061 150 6 12 chr2 6652391 6652564 -244035290 + L1PA16 LINE L1 5993 6164 -2 1695 229 128 18 chr2 6652950 6653178 -244034676 - MLT1D LTR MaLR -1 504 303 2279 104 13 0 chr2 6653178 6653477 -244034377 - AluSx SINE Alu -9 303 1 1695 229 128 18 chr2 6653477 6653702 -244034152 - MLT1D LTR MaLR -202 303 1 205 153 17 34 chr2 6654407 6654466 -244033388 + CT-rich Low_complexity Low_complexity 2 59 0 202 352 44 0 chr2 6654533 6654624 -244033230 - L2 LINE L2 -1001 2313 2219 237 139 0 0 chr2 6654673 6654716 -244033138 + (CA)n Simple_repeat Simple_repeat 2 44 0 22 0 0 0 chr2 6655603 6655625 -244032229 + AT_rich Low_complexity Low_complexity 1 22 0 210 362 38 0 chr2 6656887 6656992 -244030862 + MIR SINE MIR 33 141 -67 827 269 0 0 chr2 6657474 6657667 -244030187 - MER58A DNA MER1_type -5 219 27 196 241 68 33 chr2 6659565 6659656 -244028198 + MIR SINE MIR 28 126 -82 1623 99 86 65 chr2 6659656 6659948 -244027906 - AluSq SINE Alu -6 307 10 196 241 68 33 chr2 6659948 6659966 -244027888 + MIR SINE MIR 126 142 -66 266 361 38 19 chr2 6660364 6660522 -244027332 + MIR SINE MIR 54 214 -48 267 250 0 0 chr2 6661040 6661140 -244026714 + (TG)n Simple_repeat Simple_repeat 1 100 0 439 238 129 41 chr2 6661902 6662119 -244025735 - MIR SINE MIR -11 251 22 214 266 78 104 chr2 6662750 6662904 -244024950 - MER5B DNA MER1_type -35 154 5 1838 178 0 3 chr2 6663010 6663303 -244024551 + AluJb SINE Alu 3 294 -18 369 215 65 9 chr2 6663480 6663599 -244024255 - MLT1I LTR MaLR 0 450 281 236 328 25 17 chr2 6663686 6663805 -244024049 - MLT1I LTR MaLR -289 260 141 627 157 6 93 chr2 6664274 6664401 -244023453 + L1MC2 LINE L1 6188 6298 -46 2325 115 0 0 chr2 6664401 6664705 -244023149 - AluSx SINE Alu -8 304 1 627 157 6 93 chr2 6664705 6664749 -244023105 + L1MC2 LINE L1 6298 6344 0 * 1893 248 148 58 chr2 6664745 6665651 -244022203 + L1MC4 LINE L1 6914 7918 -124 333 0 0 0 chr2 6665651 6665688 -244022166 + (CA)n Simple_repeat Simple_repeat 2 38 0 1893 248 148 58 chr2 6665688 6665771 -244022083 + L1MC4 LINE L1 7918 7992 -50 2108 130 0 0 chr2 6666806 6667106 -244020748 - AluSc SINE Alu -9 300 1 1882 233 137 37 chr2 6668489 6669141 -244018713 - L1ME1 LINE L1 -18 6148 5432 1736 188 3 10 chr2 6669336 6669640 -244018214 + AluJo SINE Alu 1 302 -10 2144 190 128 0 chr2 6669867 6670289 -244017565 + MLT2B2 LTR ERVL 1 476 -39 576 36 58 29 chr2 6670289 6670426 -244017428 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 356 100 50 20 chr2 6670438 6670538 -244017316 + (TCTA)n Simple_repeat Simple_repeat 3 105 0 22 0 0 0 chr2 6670624 6670646 -244017208 + AT_rich Low_complexity Low_complexity 1 22 0 2286 123 0 0 chr2 6671078 6671386 -244016468 - AluSg SINE Alu -2 308 1 24 32 0 0 chr2 6671947 6671978 -244015876 + AT_rich Low_complexity Low_complexity 1 31 0 287 113 19 0 chr2 6672301 6672354 -244015500 + CT-rich Low_complexity Low_complexity 1 54 0 390 57 0 0 chr2 6672620 6672673 -244015181 + (TG)n Simple_repeat Simple_repeat 2 54 0 613 287 22 67 chr2 6673562 6673830 -244014024 + MLT1I LTR MaLR 95 350 -59 851 239 29 19 chr2 6674119 6674328 -244013526 + MER58A DNA MER1_type 7 217 -7 248 344 11 11 chr2 6675681 6675771 -244012083 - L2 LINE L2 -78 3194 3105 2212 111 0 3 chr2 6676860 6677157 -244010697 + AluSg SINE Alu 11 306 -4 271 196 71 131 chr2 6677205 6677319 -244010535 - MIR3 SINE MIR -21 187 85 667 247 17 11 chr2 6677319 6677493 -244010361 - MER5B DNA MER1_type -3 175 1 271 196 71 131 chr2 6677493 6677546 -244010308 - MIR3 SINE MIR -123 85 30 1314 170 50 57 chr2 6678416 6678562 -244009292 + AluJo SINE Alu 1 146 -166 2473 57 3 3 chr2 6678562 6678860 -244008994 + AluY SINE Alu 1 298 -13 1314 170 50 57 chr2 6678860 6678996 -244008858 + AluJo SINE Alu 146 281 -31 1729 138 0 8 chr2 6679395 6679682 -244008172 + AluSg SINE Alu 29 313 0 1614 169 59 72 chr2 6679888 6680278 -244007576 - MLT1B LTR MaLR 0 390 6 2138 118 3 0 chr2 6680702 6680991 -244006863 + AluSx SINE Alu 5 294 -18 2117 111 0 3 chr2 6681825 6682123 -244005731 + AluSg SINE Alu 1 297 -13 397 193 67 8 chr2 6682161 6682280 -244005574 + L1MCa LINE L1 1293 1418 -5008 204 143 0 24 chr2 6682280 6682322 -244005532 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 26 64 0 0 chr2 6682472 6682519 -244005335 + AT_rich Low_complexity Low_complexity 1 47 0 24 53 0 0 chr2 6682544 6682582 -244005272 + AT_rich Low_complexity Low_complexity 1 38 0 581 194 8 23 chr2 6682810 6682939 -244004915 + MIR SINE MIR 105 231 -31 27 29 0 0 chr2 6684711 6684745 -244003109 + AT_rich Low_complexity Low_complexity 1 34 0 418 337 76 52 chr2 6686164 6686452 -244001402 - L2 LINE L2 0 3272 2978 311 273 27 9 chr2 6686525 6686635 -244001219 - MIR SINE MIR 0 262 151 335 359 132 23 chr2 6686636 6686856 -244000998 + L3 LINE CR1 1328 1571 -6 2271 153 42 30 chr2 6687327 6687875 -243999979 - MLT2A2 LTR ERVL 0 554 1 15874 90 13 3 chr2 6687875 6689962 -243997892 - HERVL-A2 LTR ERVL 0 5654 3548 406 211 65 103 chr2 6690717 6690902 -243996952 + MER104 DNA MER2_type 1 178 -2 281 365 76 54 chr2 6692532 6692902 -243994952 + L2 LINE L2 2895 3272 0 1987 250 63 33 chr2 6693804 6694976 -243992878 + L1ME1 LINE L1 4511 5724 -440 387 215 132 42 chr2 6694983 6695181 -243992673 + L1ME1 LINE L1 5965 6334 0 225 340 64 14 chr2 6695300 6695441 -243992413 + L2 LINE L2 3162 3309 -4 4184 189 22 28 chr2 6696736 6698071 -243989783 - L1MB3 LINE L1 -41 6142 4819 2202 212 40 16 chr2 6698274 6698718 -243989136 + MLT2B2 LTR ERVL 1 455 -60 951 57 19 19 chr2 6698718 6698877 -243988977 + (TCTA)n Simple_repeat Simple_repeat 2 160 0 325 335 40 50 chr2 6699791 6699991 -243987863 + MIR SINE MIR 47 244 -18 192 158 0 0 chr2 6700558 6700596 -243987258 + T-rich Low_complexity Low_complexity 1 38 0 2264 194 27 57 chr2 6703980 6704565 -243983289 - L1MC1 LINE L1 -75 6258 5739 1279 53 0 0 chr2 6704565 6704715 -243983139 - L1PA3 LINE L1 -3 6152 6003 2264 194 27 57 chr2 6704715 6705023 -243982831 - L1MC1 LINE L1 -594 5739 5423 207 283 0 0 chr2 6705471 6705517 -243982337 + (TTG)n Simple_repeat Simple_repeat 2 47 0 243 328 59 8 chr2 6705554 6705673 -243982181 + MIR SINE MIR 101 225 -37 429 310 35 10 chr2 6706026 6706229 -243981625 - MLT1L LTR MaLR 0 615 408 22 0 0 0 chr2 6706413 6706435 -243981419 + AT_rich Low_complexity Low_complexity 1 22 0 34 79 0 0 chr2 6706552 6706628 -243981226 + AT_rich Low_complexity Low_complexity 1 76 0 3621 197 48 17 chr2 6706998 6707766 -243980088 + L1MC1 LINE L1 5542 6333 0 2131 111 7 10 chr2 6708099 6708396 -243979458 - AluSq SINE Alu -17 296 1 403 281 65 41 chr2 6708630 6708876 -243978978 - L1MEc LINE L1 -3679 2536 2285 211 122 41 0 chr2 6709001 6709050 -243978804 + (TA)n Simple_repeat Simple_repeat 2 52 0 270 306 35 57 chr2 6709397 6709812 -243978042 - L1MEc LINE L1 -768 1808 1361 379 309 67 49 chr2 6709909 6710194 -243977660 - L1MEc LINE L1 -5046 1159 870 180 0 0 0 chr2 6710880 6710900 -243976954 + (CAAAAA)n Simple_repeat Simple_repeat 1 20 0 439 285 56 56 chr2 6711015 6711229 -243976625 + Charlie8 DNA MER1_type 1 214 -2203 5485 20 0 0 chr2 6711686 6712271 -243975583 - L1PA3 LINE L1 -5 6150 5566 252 317 111 20 chr2 6713915 6714137 -243973717 + MIR3 SINE MIR 4 251 -11 673 234 19 6 chr2 6714567 6714725 -243973129 - MER58B DNA MER1_type 0 341 182 834 226 34 15 chr2 6714727 6714931 -243972923 + MER20 DNA MER1_type 3 210 -9 596 167 123 14 chr2 6714932 6715070 -243972784 - MER58B DNA MER1_type -152 189 37 37 39 0 0 chr2 6718507 6718558 -243969296 + AT_rich Low_complexity Low_complexity 1 51 0 253 280 167 15 chr2 6718808 6718940 -243968914 + MIR SINE MIR 1 152 -110 266 239 69 54 chr2 6718948 6719078 -243968776 - LTR67 LTR ERVL 0 557 426 2360 146 34 3 chr2 6719393 6719777 -243968077 + MSTA LTR MaLR 33 428 0 268 208 0 38 chr2 6721060 6721113 -243966741 - MER58A DNA MER1_type 0 224 174 1393 158 50 68 chr2 6721121 6721224 -243966630 + AluJb SINE Alu 11 114 -199 2929 71 3 3 chr2 6721224 6721577 -243966277 + THE1A LTR MaLR 3 355 0 1393 158 50 68 chr2 6721577 6721781 -243966073 + AluJb SINE Alu 114 313 0 638 236 54 7 chr2 6721789 6721937 -243965917 - MER58A DNA MER1_type -33 191 37 2089 172 9 78 chr2 6722286 6722533 -243965321 + MSTD LTR MaLR 1 208 -188 420 55 0 0 chr2 6722533 6722588 -243965266 + (CA)n Simple_repeat Simple_repeat 1 55 0 2089 172 9 78 chr2 6722588 6722765 -243965089 + MSTD LTR MaLR 208 396 0 2570 120 13 13 chr2 6723087 6723461 -243964393 - THE1C LTR MaLR -1 374 1 1561 219 22 35 chr2 6723461 6723824 -243964030 - MLT1A1 LTR MaLR -4 361 1 269 323 121 0 chr2 6724678 6724777 -243963077 + L3 LINE CR1 1373 1483 -94 625 245 41 41 chr2 6725760 6725956 -243961898 + MIR SINE MIR 46 241 -21 202 250 0 0 chr2 6725973 6726017 -243961837 - L2 LINE L2 -5 3308 3265 521 165 0 10 chr2 6726305 6726408 -243961446 + GA-rich Low_complexity Low_complexity 3 104 0 239 192 13 51 chr2 6727738 6727816 -243960038 + L1MC4 LINE L1 6615 6689 -1353 508 253 86 38 chr2 6727844 6728136 -243959718 - HAL1b LINE L1 -214 1134 829 243 347 0 24 chr2 6728138 6728262 -243959592 - L2 LINE L2 -942 2372 2252 30 69 0 0 chr2 6728720 6728778 -243959076 + AT_rich Low_complexity Low_complexity 1 58 0 5921 19 17 1 chr2 6728903 6729551 -243958303 - SVA Other Other -3 1383 726 2436 120 11 14 chr2 6729575 6729942 -243957912 - L1MA2 LINE L1 0 6304 5939 1312 252 132 12 chr2 6730440 6730857 -243956997 - MLT1C LTR MaLR 0 467 1 2307 116 34 45 chr2 6731476 6731636 -243956218 + THE1C LTR MaLR 1 161 -214 1963 153 7 0 chr2 6731636 6731924 -243955930 - AluSq SINE Alu -23 290 1 2307 116 34 45 chr2 6731924 6732142 -243955712 + THE1C LTR MaLR 161 375 0 26 30 0 0 chr2 6732250 6732283 -243955571 + AT_rich Low_complexity Low_complexity 1 33 0 2200 110 7 0 chr2 6733999 6734123 -243953731 + AluSg SINE Alu 1 123 -187 462 18 0 0 chr2 6734123 6734178 -243953676 + (CA)n Simple_repeat Simple_repeat 2 56 0 2200 110 7 0 chr2 6734178 6734361 -243953493 + AluSg SINE Alu 123 310 0 181 297 55 22 chr2 6734681 6734772 -243953082 + MIR SINE MIR 116 209 -53 2110 111 7 3 chr2 6734815 6735103 -243952751 - AluSx SINE Alu -23 289 1 798 222 94 35 chr2 6736214 6736496 -243951358 - MER33 DNA MER1_type -30 294 1 477 365 103 6 chr2 6736576 6736928 -243950926 - L2 LINE L2 -219 3053 2667 189 154 0 0 chr2 6737072 6737111 -243950743 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 451 278 156 15 chr2 6737167 6737372 -243950482 - MIR SINE MIR -27 235 2 232 297 61 10 chr2 6737571 6737707 -243950147 - MIR SINE MIR -54 154 20 22 0 0 0 chr2 6737874 6737896 -243949958 + AT_rich Low_complexity Low_complexity 1 22 0 377 272 47 22 chr2 6738087 6738265 -243949589 + MIR SINE MIR 19 192 -59 256 293 109 23 chr2 6738434 6738608 -243949246 - MIR SINE MIR -55 207 19 542 254 48 12 chr2 6739269 6739434 -243948420 + MIR SINE MIR 28 198 -64 1016 205 89 13 chr2 6743095 6743408 -243944446 - MER33 DNA MER1_type -7 317 1 422 201 82 50 chr2 6744396 6744524 -243943330 - MER53 DNA DNA -25 164 29 1820 100 37 0 chr2 6744524 6744765 -243943089 - AluSx SINE Alu -20 292 43 422 201 82 50 chr2 6744765 6744795 -243943059 - MER53 DNA DNA -160 29 1 288 326 106 49 chr2 6744911 6745401 -243942453 - L2 LINE L2 -17 3296 2778 1959 169 28 11 chr2 6745860 6746099 -243941755 - MLT1B LTR MaLR 0 390 141 2085 113 0 61 chr2 6746099 6746425 -243941429 + AluSp SINE Alu 1 306 -7 1959 169 28 11 chr2 6746425 6746547 -243941307 - MLT1B LTR MaLR -249 141 23 1558 216 218 4 chr2 6749485 6749975 -243937879 - L1MB8 LINE L1 -1 6177 5583 234 0 0 0 chr2 6750322 6750348 -243937506 + (T)n Simple_repeat Simple_repeat 1 26 0 293 215 83 50 chr2 6751134 6751255 -243936599 - MER96B DNA MER1_type? -261 156 32 217 225 0 0 chr2 6751285 6751325 -243936529 + L2 LINE L2 3266 3305 -8 299 293 41 23 chr2 6751667 6751805 -243936049 + MIR SINE MIR 5 143 -68 231 358 0 33 chr2 6753320 6753440 -243934414 - MIR SINE MIR -114 148 33 240 35 0 0 chr2 6754994 6755023 -243932831 + (CA)n Simple_repeat Simple_repeat 2 30 0 1806 146 55 78 chr2 6755375 6755759 -243932095 + THE1C LTR MaLR 1 375 0 395 301 30 15 chr2 6755787 6755920 -243931934 - MIR SINE MIR -71 191 57 393 66 279 0 chr2 6756505 6756566 -243931288 + MADE1 DNA Mariner 3 80 0 2197 98 24 0 chr2 6756722 6757019 -243930835 + AluSg SINE Alu 1 304 -6 952 199 0 31 chr2 6757057 6757253 -243930601 + AluJo SINE Alu 120 309 -3 205 357 29 0 chr2 6757929 6757999 -243929855 + MIR SINE MIR 17 88 -120 1147 305 96 43 chr2 6758351 6758386 -243929468 + L1M4 LINE L1 2884 2916 -3230 2268 113 3 3 chr2 6758386 6758696 -243929158 + AluY SINE Alu 1 310 -1 1147 305 96 43 chr2 6758696 6760040 -243927814 + L1M4 LINE L1 2916 4335 -1811 22 35 0 0 chr2 6760122 6760151 -243927703 + AT_rich Low_complexity Low_complexity 1 29 0 226 244 136 97 chr2 6760497 6760776 -243927078 + L1ME3A LINE L1 5681 5970 -200 756 20 29 0 chr2 6760968 6761070 -243926784 + (TCTA)n Simple_repeat Simple_repeat 3 107 0 180 400 24 12 chr2 6763172 6763257 -243924597 - L2 LINE L2 -1 3271 3186 193 333 40 0 chr2 6763405 6763480 -243924374 + MIR SINE MIR 41 118 -90 238 315 54 50 chr2 6763675 6763975 -243923879 + L2 LINE L2 2858 3233 -39 437 263 112 16 chr2 6764643 6764829 -243923025 + MIR SINE MIR 45 250 -12 695 149 15 15 chr2 6765032 6765166 -243922688 + L1MB8 LINE L1 6044 6177 -1 187 352 193 0 chr2 6765347 6765492 -243922362 - L3 LINE CR1 -421 1156 984 241 366 77 11 chr2 6766265 6766448 -243921406 + MIR SINE MIR 62 256 -6 192 407 0 0 chr2 6766994 6767080 -243920774 + L2 LINE L2 3187 3272 0 190 299 43 17 chr2 6767603 6767720 -243920134 + MIR SINE MIR 27 146 -62 195 340 78 10 chr2 6768882 6768985 -243918869 - L2 LINE L2 -12 3260 3151 24 0 0 0 chr2 6770551 6770575 -243917279 + AT_rich Low_complexity Low_complexity 1 24 0 1523 234 45 52 chr2 6770713 6771178 -243916676 + MLT1C LTR MaLR 6 467 0 600 40 0 0 chr2 6771562 6771637 -243916217 + (TGG)n Simple_repeat Simple_repeat 2 76 0 950 265 71 58 chr2 6772374 6772702 -243915152 + MER77 LTR ERV1 281 673 -6 198 227 281 47 chr2 6772880 6773008 -243914846 + L2 LINE L2 3102 3259 -13 1268 206 27 108 chr2 6773130 6773537 -243914317 - MLT1A2 LTR MaLR 0 374 1 688 281 33 54 chr2 6774856 6775098 -243912756 + MIR SINE MIR 16 252 -10 3637 174 73 4 chr2 6775639 6776323 -243911531 + L1MB2 LINE L1 5439 6169 -2 223 362 122 31 chr2 6776340 6776594 -243911260 - L2 LINE L2 -61 3211 2935 555 191 19 0 chr2 6777419 6777581 -243910273 + GA-rich Low_complexity Low_complexity 2 166 0 406 275 74 11 chr2 6778010 6778080 -243909774 - MIR SINE MIR -16 246 182 2232 174 100 55 chr2 6778080 6778610 -243909244 + MLT2B3 LTR ERVL 1 554 0 406 275 74 11 chr2 6778610 6778728 -243909126 - MIR SINE MIR -80 182 46 2319 132 90 25 chr2 6778898 6779300 -243908554 + MSTA LTR MaLR 1 428 0 203 225 0 127 chr2 6779890 6779914 -243907940 - MER5A DNA MER1_type 0 189 164 2853 86 11 0 chr2 6779914 6780265 -243907589 - THE1A LTR MaLR 0 355 1 12201 96 5 10 chr2 6780265 6781853 -243906001 - THE1A-int LTR MaLR 0 1580 1 2818 91 11 0 chr2 6781853 6782204 -243905650 - THE1A LTR MaLR 0 355 1 203 225 0 127 chr2 6782204 6782248 -243905606 - MER5A DNA MER1_type -22 167 128 217 320 62 23 chr2 6782277 6782405 -243905449 + MER5A DNA MER1_type 55 187 -2 * 732 178 8 0 chr2 6782292 6782421 -243905433 - MER5A DNA MER1_type -59 130 1 395 242 6 19 chr2 6782745 6782902 -243904952 + (TA)n Simple_repeat Simple_repeat 1 155 0 210 353 118 0 chr2 6783400 6783519 -243904335 - L2 LINE L2 0 3313 3181 442 248 16 40 chr2 6783838 6783963 -243903891 - MER5A DNA MER1_type -64 125 4 368 255 101 13 chr2 6784563 6784712 -243903142 - LTR33 LTR ERVL -5 516 355 270 254 0 14 chr2 6785788 6785859 -243901995 + MIR SINE MIR 22 91 -117 1592 243 200 20 chr2 6786158 6786702 -243901152 - MLT1E1 LTR MaLR 0 654 13 5329 118 22 4 chr2 6787584 6788249 -243899605 - L1PA13 LINE L1 0 6163 5479 195 42 0 0 chr2 6788249 6788273 -243899581 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5329 118 22 4 chr2 6788273 6788411 -243899443 - L1PA13 LINE L1 -684 5479 5345 22 56 0 0 chr2 6789152 6789188 -243898666 + AT_rich Low_complexity Low_complexity 1 36 0 401 375 48 39 chr2 6789231 6789339 -243898515 - L2 LINE L2 -664 2650 2545 2223 107 7 3 chr2 6789339 6789648 -243898206 - AluSq SINE Alu -3 310 1 401 375 48 39 chr2 6789648 6789952 -243897902 - L2 LINE L2 -769 2545 2234 206 271 43 107 chr2 6790353 6790493 -243897361 + L2 LINE L2 2710 2840 -474 212 278 72 31 chr2 6790729 6790826 -243897028 - L2 LINE L2 -641 2673 2573 445 264 0 16 chr2 6790827 6790952 -243896902 - LTR67 LTR ERVL -2 555 433 189 322 252 9 chr2 6791799 6791914 -243895940 + MIR3 SINE MIR 46 188 -20 22 35 0 0 chr2 6792143 6792172 -243895682 + AT_rich Low_complexity Low_complexity 1 29 0 213 65 0 0 chr2 6793492 6793523 -243894331 + (CA)n Simple_repeat Simple_repeat 2 32 0 449 204 25 0 chr2 6794171 6794333 -243893521 + GA-rich Low_complexity Low_complexity 2 167 0 487 348 14 9 chr2 6796672 6796882 -243890972 + MIR SINE MIR 31 241 -21 1189 132 0 0 chr2 6797156 6797323 -243890531 + AluSg/x SINE Alu 131 297 -13 216 243 0 57 chr2 6798768 6798838 -243889016 + MIR SINE MIR 108 173 -89 300 262 138 28 chr2 6799148 6799293 -243888561 - MIR SINE MIR -70 192 32 208 284 27 54 chr2 6800603 6800677 -243887177 - MIR SINE MIR -59 149 78 222 298 18 0 chr2 6802149 6802206 -243885648 - MIR SINE MIR -59 149 92 188 292 106 18 chr2 6802644 6802757 -243885097 + MIR SINE MIR 85 207 -55 8057 213 48 37 chr2 6803131 6806986 -243880868 - L1MC1 LINE L1 0 6613 2801 2590 21 10 0 chr2 6806986 6807275 -243880579 - L1PA4 LINE L1 0 6155 5864 8057 213 48 37 chr2 6807275 6808785 -243879069 - L1MC1 LINE L1 -3812 2801 883 1702 197 43 70 chr2 6808785 6809226 -243878628 + MSTB1 LTR MaLR 4 432 0 8057 213 48 37 chr2 6809226 6810090 -243877764 - L1MC1 LINE L1 -5730 883 30 335 305 30 15 chr2 6810956 6811087 -243876767 - MIR SINE MIR -81 181 49 518 271 45 40 chr2 6813265 6813512 -243874342 + LTR16A LTR ERVL 203 450 0 183 331 96 45 chr2 6814088 6814266 -243873588 - L2 LINE L2 -512 2802 2616 198 0 0 0 chr2 6814677 6814699 -243873155 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 1266 184 53 26 chr2 6815046 6815312 -243872542 + AluJb SINE Alu 1 273 -39 316 325 88 18 chr2 6815799 6815913 -243871941 - MER5B DNA MER1_type -3 175 54 241 299 37 110 chr2 6815822 6815986 -243871868 + MER5A DNA MER1_type 38 189 0 * 2356 114 0 0 chr2 6816444 6816750 -243871104 + AluSp SINE Alu 1 306 -7 348 167 0 0 chr2 6816795 6816867 -243870987 + GA-rich Low_complexity Low_complexity 2 73 0 617 250 43 6 chr2 6816869 6817033 -243870821 + MIR SINE MIR 88 257 -5 300 329 71 52 chr2 6817065 6817530 -243870324 - L1MC4a LINE L1 -1914 5894 5421 227 173 19 0 chr2 6817767 6817819 -243870035 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 245 298 25 0 chr2 6817841 6817962 -243869892 + (TAGA)n Simple_repeat Simple_repeat 4 127 0 243 256 61 24 chr2 6818130 6818212 -243869642 + MIR SINE MIR 62 146 -62 258 295 40 0 chr2 6818311 6818410 -243869444 - MIR SINE MIR -88 120 47 22 35 0 0 chr2 6818648 6818677 -243869177 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 6819995 6820016 -243867838 + AT_rich Low_complexity Low_complexity 1 21 0 482 225 152 67 chr2 6820608 6821086 -243866768 + LTR50 LTR ERVL 9 605 -190 340 184 38 0 chr2 6821105 6821192 -243866662 + LTR50 LTR ERVL 435 795 0 647 262 50 54 chr2 6824359 6824657 -243863197 + MER102b DNA MER1_type 37 333 -8 305 222 69 56 chr2 6824949 6825093 -243862761 + L1M4 LINE L1 4129 4274 -1872 283 302 167 49 chr2 6825107 6825505 -243862349 - L2 LINE L2 0 3313 2779 711 281 84 39 chr2 6825608 6826024 -243861830 + LTR16A LTR ERVL 7 441 -9 709 292 112 4 chr2 6826164 6826397 -243861457 - L2 LINE L2 -987 2327 2070 378 329 42 42 chr2 6826428 6826741 -243861113 + L1ME3A LINE L1 5635 5947 -223 1885 139 14 0 chr2 6826876 6827189 -243860665 - AluSx SINE Alu 0 317 1 473 338 29 10 chr2 6827416 6827620 -243860234 - MIR SINE MIR -24 238 31 223 265 60 0 chr2 6827994 6828077 -243859777 - MIR3 SINE MIR -21 187 100 579 267 28 17 chr2 6828114 6828290 -243859564 - MER5B DNA MER1_type 0 178 1 1330 202 5 5 chr2 6828685 6828908 -243858946 - MER58A DNA MER1_type 0 224 2 2025 124 0 0 chr2 6830038 6830355 -243857499 + AluSx SINE Alu 16 332 0 408 336 36 54 chr2 6830680 6830957 -243856897 - L2 LINE L2 0 3272 3001 297 362 52 24 chr2 6833105 6833315 -243854539 + MIR SINE MIR 47 262 0 1735 145 69 0 chr2 6833358 6833648 -243854206 + THE1B LTR MaLR 1 310 -54 674 124 0 0 chr2 6833648 6833745 -243854109 + AluY SINE Alu 213 309 -2 566 69 0 0 chr2 6833748 6833820 -243854034 + THE1B LTR MaLR 293 364 0 198 91 0 0 chr2 6834460 6834493 -243853361 + (CA)n Simple_repeat Simple_repeat 1 33 0 1986 110 43 17 chr2 6835178 6835511 -243852343 - AluSc SINE Alu 0 341 1 442 258 11 84 chr2 6835543 6835721 -243852133 - MLT1J1 LTR MaLR -236 210 46 32 57 0 0 chr2 6836486 6836539 -243851315 + AT_rich Low_complexity Low_complexity 1 53 0 2028 130 0 13 chr2 6836953 6837253 -243850601 - AluSx SINE Alu -16 296 1 372 347 103 9 chr2 6837634 6837847 -243850007 - MIR SINE MIR -10 252 20 701 256 137 27 chr2 6838109 6838371 -243849483 - LTR40a LTR ERVL -120 399 109 345 309 112 15 chr2 6838618 6838958 -243848896 + L1ME4a LINE L1 5542 5914 -207 2071 98 0 17 chr2 6839414 6839746 -243848108 - AluY SINE Alu 0 327 1 196 341 93 37 chr2 6839909 6840155 -243847699 + L2 LINE L2 2834 3093 -179 927 209 82 19 chr2 6842956 6843162 -243844692 + MER20 DNA MER1_type 1 219 0 292 280 41 113 chr2 6843163 6843367 -243844487 - MIR SINE MIR -40 168 11 271 175 16 63 chr2 6844872 6844935 -243842919 - L2 LINE L2 -7 3265 3206 389 352 6 0 chr2 6845974 6846153 -243841701 + (TG)n Simple_repeat Simple_repeat 1 180 0 204 230 169 80 chr2 6847155 6847368 -243840486 + MIR SINE MIR 3 234 -28 23 54 0 0 chr2 6847659 6847696 -243840158 + AT_rich Low_complexity Low_complexity 1 37 0 534 211 0 10 chr2 6847829 6847933 -243839921 + MER63 DNA MER1_type 21 749 -313 1762 161 10 3 chr2 6849213 6849504 -243838350 - AluSx SINE Alu -19 293 1 244 135 0 0 chr2 6849504 6849541 -243838313 + MSTB LTR MaLR 386 422 -4 271 282 51 26 chr2 6849579 6849696 -243838158 - L1ME LINE L1 -409 5712 5593 192 236 55 0 chr2 6849952 6850007 -243837847 + L2 LINE L2 3254 3311 -2 1810 197 120 63 chr2 6850339 6850897 -243836957 - L1MD2 LINE L1 -10 6743 6154 1951 215 19 74 chr2 6850972 6851748 -243836106 - L1MD2 LINE L1 -488 6148 5402 6938 239 87 42 chr2 6852012 6853113 -243834741 - L1MD2 LINE L1 -1302 5238 4188 6452 103 24 1 chr2 6853113 6854096 -243833758 + L1PA10 LINE L1 5158 6163 -5 6938 239 87 42 chr2 6854096 6856353 -243831501 - L1MD2 LINE L1 -2352 4188 1626 2432 66 7 0 chr2 6856353 6856654 -243831200 + AluY SINE Alu 1 303 -8 6938 239 87 42 chr2 6856654 6857749 -243830105 - L1MD2 LINE L1 -4914 1626 582 207 0 0 0 chr2 6858359 6858382 -243829472 + (T)n Simple_repeat Simple_repeat 1 23 0 28 48 0 0 chr2 6858672 6858714 -243829140 + AT_rich Low_complexity Low_complexity 1 42 0 2431 69 0 0 chr2 6858947 6859235 -243828619 - AluY SINE Alu -12 299 12 365 283 75 100 chr2 6859243 6859632 -243828222 - MLT1J LTR MaLR -132 379 1 987 105 0 0 chr2 6859952 6860085 -243827769 - L1MA3 LINE L1 0 6305 6173 552 81 35 0 chr2 6860016 6860107 -243827747 - L1MA3 LINE L1 -63 6241 6134 2289 105 0 13 chr2 6862194 6862507 -243825347 + AluSg SINE Alu 1 309 -1 429 302 166 27 chr2 6862820 6863158 -243824696 + MLT1I LTR MaLR 19 403 -6 212 344 21 52 chr2 6863221 6863413 -243824441 - MIR SINE MIR -71 191 6 2459 77 0 0 chr2 6863613 6863924 -243823930 + AluY SINE Alu 1 311 0 2332 149 22 75 chr2 6866821 6867312 -243820542 + MLT1C LTR MaLR 1 465 -2 240 254 0 30 chr2 6869251 6869318 -243818536 + GA-rich Low_complexity Low_complexity 1 65 0 2190 105 3 35 chr2 6869769 6870084 -243817770 + AluSx SINE Alu 1 305 -7 323 236 25 70 chr2 6870477 6870634 -243817220 + L1M4 LINE L1 3077 3226 -2920 314 344 133 16 chr2 6870663 6871099 -243816755 + L1M4 LINE L1 4005 4491 -1655 257 255 213 58 chr2 6872027 6872215 -243815639 + L2 LINE L2 989 1205 -2109 10163 206 52 15 chr2 6872386 6873517 -243814337 + L1 LINE L1 2220 3308 -2838 1631 170 19 47 chr2 6873517 6873835 -243814019 + AluJb SINE Alu 1 309 -3 10163 206 52 15 chr2 6873835 6875202 -243812652 + L1 LINE L1 3308 4810 -1336 788 148 0 0 chr2 6875203 6875338 -243812516 + L1 LINE L1 3625 3759 -2387 227 205 0 0 chr2 6875357 6875396 -243812458 - AluJ/monomer SINE Alu -262 40 2 2959 220 59 7 chr2 6875398 6876140 -243811714 + L1MD2 LINE L1 5576 6356 -3 3211 264 105 27 chr2 6876169 6878074 -243809780 + L1ME1 LINE L1 2362 4410 -1805 2723 221 71 60 chr2 6878084 6878573 -243809281 + L1ME1 LINE L1 4805 5287 -948 195 42 0 0 chr2 6878573 6878597 -243809257 + (TA)n Simple_repeat Simple_repeat 2 25 0 2723 221 71 60 chr2 6878597 6879173 -243808681 + L1ME1 LINE L1 5287 5898 -337 2360 124 23 3 chr2 6879173 6879527 -243808327 + THE1B LTR MaLR 4 364 0 2723 221 71 60 chr2 6879527 6879861 -243807993 + L1ME1 LINE L1 5898 6227 -8 956 113 17 17 chr2 6879976 6880018 -243807836 + (GGAA)n Simple_repeat Simple_repeat 1 219 0 956 113 17 17 chr2 6880018 6880195 -243807659 + (GGAA)n Simple_repeat Simple_repeat 3 179 0 961 129 23 4 chr2 6880455 6880678 -243807176 + GA-rich Low_complexity Low_complexity 3 228 0 531 103 19 37 chr2 6880678 6880785 -243807069 + (GAAAA)n Simple_repeat Simple_repeat 4 108 0 221 320 0 27 chr2 6882247 6882322 -243805532 + L2 LINE L2 3190 3262 -10 212 234 0 0 chr2 6882380 6882427 -243805427 + (TG)n Simple_repeat Simple_repeat 2 48 0 506 257 33 26 chr2 6883194 6883346 -243804508 - MIR SINE MIR -46 216 64 23 33 0 0 chr2 6883367 6883397 -243804457 + AT_rich Low_complexity Low_complexity 1 30 0 808 282 32 70 chr2 6883803 6884215 -243803639 + L2 LINE L2 2915 3310 -3 2747 208 10 32 chr2 6884428 6884609 -243803245 + L1MC1 LINE L1 4982 5166 -1167 1991 109 40 0 chr2 6884609 6884885 -243802969 + AluSx SINE Alu 13 299 -13 2747 208 10 32 chr2 6884885 6885527 -243802327 + L1MC1 LINE L1 5166 5916 -417 630 331 71 21 chr2 6885528 6885857 -243801997 - MLT1G LTR MaLR -289 301 1 1271 266 35 36 chr2 6885982 6886368 -243801486 + L1M4 LINE L1 2971 3357 -2789 2242 89 0 20 chr2 6886368 6886672 -243801182 - AluY SINE Alu -13 298 1 1271 266 35 36 chr2 6886672 6886916 -243800938 + L1M4 LINE L1 3357 3600 -2546 305 221 0 11 chr2 6886916 6887011 -243800843 + (TA)n Simple_repeat Simple_repeat 1 94 0 818 94 109 0 chr2 6887012 6887140 -243800714 + AluY SINE Alu 39 180 -131 30 83 0 0 chr2 6887140 6887176 -243800678 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr2 6887235 6887260 -243800594 + AT_rich Low_complexity Low_complexity 1 25 0 261 0 0 0 chr2 6887272 6887301 -243800553 + (TA)n Simple_repeat Simple_repeat 1 29 0 841 227 14 5 chr2 6887359 6887566 -243800288 - L1ME1 LINE L1 -223 5943 5735 959 126 0 0 chr2 6887717 6887868 -243799986 + L1PA15 LINE L1 6011 6161 -4 262 89 18 18 chr2 6888987 6889043 -243798811 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 276 250 29 0 chr2 6889243 6889311 -243798543 - MIR SINE MIR -108 154 85 2037 183 22 79 chr2 6890427 6890920 -243796934 - MLT1C LTR MaLR 0 467 3 220 236 0 18 chr2 6891356 6891411 -243796443 + A-rich Low_complexity Low_complexity 2 55 0 184 183 300 0 chr2 6892015 6892075 -243795779 + L2 LINE L2 3204 3281 -32 195 100 0 0 chr2 6892142 6892172 -243795682 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 3076 176 64 3 chr2 6892313 6893084 -243794770 + L1M2 LINE L1 4673 5496 -743 494 170 7 35 chr2 6893226 6893367 -243794487 + GA-rich Low_complexity Low_complexity 2 138 0 402 299 75 31 chr2 6894901 6895185 -243792669 - L1MDa LINE L1 -3854 2686 2395 2269 171 15 20 chr2 6895582 6896066 -243791788 - Tigger2 DNA MER2_type 0 2718 2 881 158 23 0 chr2 6896400 6896577 -243791277 - L1MA7 LINE L1 0 6291 6111 243 384 31 40 chr2 6896935 6897159 -243790695 - L1MDa LINE L1 -5476 1054 833 315 0 0 0 chr2 6897502 6897537 -243790317 + (CA)n Simple_repeat Simple_repeat 2 36 0 231 125 0 0 chr2 6897537 6897577 -243790277 + (GA)n Simple_repeat Simple_repeat 1 40 0 475 245 21 75 chr2 6898137 6898325 -243789529 - MLT1J LTR MaLR -31 480 303 237 345 63 21 chr2 6898833 6898975 -243788879 + MIR SINE MIR 21 168 -94 203 314 144 0 chr2 6899449 6899567 -243788287 + L2 LINE L2 3179 3313 0 2012 147 3 0 chr2 6900869 6901162 -243786692 - AluSx SINE Alu -18 294 1 230 277 50 0 chr2 6901165 6901284 -243786570 - L1ME LINE L1 -230 5891 5767 1660 227 164 41 chr2 6901770 6902449 -243785405 + LTR41 LTR ERVL 1 762 -11 21 0 0 0 chr2 6902758 6902779 -243785075 + AT_rich Low_complexity Low_complexity 1 21 0 648 286 6 6 chr2 6902939 6903121 -243784733 + MER58A DNA MER1_type 43 224 0 329 350 127 0 chr2 6903247 6903467 -243784387 + MIR SINE MIR 2 249 -13 188 262 66 16 chr2 6903520 6903581 -243784273 - MIR SINE MIR -188 74 11 1413 211 156 70 chr2 6903827 6904429 -243783425 + MLT1E1 LTR MaLR 1 654 0 1894 262 44 30 chr2 6905092 6905702 -243782152 - MLT1E2 LTR MaLR -7 619 1 206 391 64 9 chr2 6906939 6907049 -243780805 + L2 LINE L2 3137 3252 -20 241 367 143 35 chr2 6909286 6909711 -243778143 - L2 LINE L2 -661 2653 2183 204 286 18 0 chr2 6910413 6910469 -243777385 + MER5A DNA MER1_type 9 65 -124 28 29 0 0 chr2 6910911 6910946 -243776908 + AT_rich Low_complexity Low_complexity 1 35 0 216 256 105 12 chr2 6912304 6912390 -243775464 - MIR SINE MIR -61 147 54 295 263 12 12 chr2 6913322 6913402 -243774452 - MIR3 SINE MIR -31 177 98 21 36 0 0 chr2 6914711 6914739 -243773115 + AT_rich Low_complexity Low_complexity 1 28 0 2437 88 3 3 chr2 6916018 6916325 -243771529 - AluSq SINE Alu -6 307 1 343 333 62 23 chr2 6916436 6916613 -243771241 + MIR SINE MIR 46 229 -33 588 197 79 17 chr2 6916809 6916987 -243770867 - MER53 DNA DNA 0 189 1 1938 145 26 57 chr2 6917527 6917913 -243769941 - THE1C LTR MaLR -1 374 1 2281 113 0 3 chr2 6918430 6918731 -243769123 + AluSx SINE Alu 1 300 -12 462 157 0 0 chr2 6919258 6919341 -243768513 + CT-rich Low_complexity Low_complexity 2 84 0 3041 82 42 5 chr2 6919430 6919858 -243767996 - MLT2A1 LTR ERVL 0 444 1 1552 232 132 5 chr2 6919885 6920333 -243767521 - MLT1D LTR MaLR 0 505 1 1821 161 3 25 chr2 6921089 6921405 -243766449 + AluSx SINE Alu 1 309 -3 438 215 27 102 chr2 6921661 6921847 -243766007 - MER69A DNA AcHobo 0 177 6 474 224 5 170 chr2 6921952 6922175 -243765679 + MER5A DNA MER1_type 1 186 -3 5541 62 19 27 chr2 6923089 6923861 -243763993 + MER4E LTR ERV1 1 766 0 1774 225 66 4 chr2 6925095 6925567 -243762287 - L1MC2 LINE L1 -18 6326 5826 2237 242 21 5 chr2 6925574 6926226 -243761628 - L1MC2 LINE L1 -943 5203 4541 351 100 43 0 chr2 6926237 6926307 -243761547 + (TA)n Simple_repeat Simple_repeat 2 74 0 448 104 0 0 chr2 6926365 6926432 -243761422 - L1PA5 LINE L1 -6 6148 6082 2000 24 8 0 chr2 6926432 6926679 -243761175 + L1P2 LINE L1 5369 5617 -537 * 5296 264 22 17 chr2 6926673 6928697 -243759157 - L1MC2 LINE L1 -1589 4557 2524 487 371 79 21 chr2 6929041 6929459 -243758395 - L2 LINE L2 -794 2520 2079 2702 101 15 2 chr2 6929986 6930383 -243757471 - L1MA1 LINE L1 -9 6293 5892 2155 261 69 28 chr2 6930509 6931637 -243756217 - L1ME1 LINE L1 -80 6086 4913 2105 121 3 13 chr2 6933089 6933403 -243754451 - AluY SINE Alu 0 311 1 416 317 194 30 chr2 6934756 6935188 -243752666 - L2 LINE L2 -7 3306 2804 2263 122 42 11 chr2 6935193 6935546 -243752308 - THE1B LTR MaLR 0 364 1 2795 161 73 19 chr2 6935654 6936299 -243751555 + L1MB3 LINE L1 5497 6176 -7 248 258 39 62 chr2 6936305 6936433 -243751421 - L2 LINE L2 -609 2705 2581 694 309 69 69 chr2 6936474 6936584 -243751270 - L2 LINE L2 -1504 1810 1701 207 0 0 0 chr2 6936584 6936607 -243751247 + (TG)n Simple_repeat Simple_repeat 1 23 0 694 309 69 69 chr2 6936607 6937078 -243750776 - L2 LINE L2 -1612 1702 1229 188 244 0 0 chr2 6937093 6937134 -243750720 - MIR SINE MIR -71 191 151 188 217 206 33 chr2 6937315 6937407 -243750447 - MIR SINE MIR -141 121 14 5290 160 10 15 chr2 6938334 6939501 -243748353 + L1MA4 LINE L1 5129 6289 -11 260 212 182 15 chr2 6939633 6939765 -243748089 + L1ME LINE L1 5492 5645 -476 295 250 0 0 chr2 6940172 6940240 -243747614 + MIR SINE MIR 176 243 -19 274 221 26 26 chr2 6940322 6940399 -243747455 + CT-rich Low_complexity Low_complexity 3 79 0 23 0 0 0 chr2 6941602 6941625 -243746229 + AT_rich Low_complexity Low_complexity 1 23 0 190 230 46 92 chr2 6941744 6941831 -243746023 + L2 LINE L2 3231 3313 0 201 356 53 53 chr2 6941911 6942043 -243745811 + L2 LINE L2 3137 3268 -4 1283 226 3 66 chr2 6943167 6943485 -243744369 + AluJb SINE Alu 14 311 -1 474 274 48 12 chr2 6943850 6944018 -243743836 + MLT1I LTR MaLR 201 374 -35 480 198 0 0 chr2 6944020 6944101 -243743753 - FLAM_A SINE Alu -36 106 26 1257 226 54 11 chr2 6944253 6944603 -243743251 - MLT1A1 LTR MaLR 0 365 1 349 309 147 6 chr2 6945308 6945507 -243742347 - MIR SINE MIR -11 251 27 3448 38 38 0 chr2 6945687 6946138 -243741716 + L1P LINE L1 4545 5012 -1134 7657 148 11 46 chr2 6947427 6948911 -243738943 - THE1C-int LTR MaLR -145 1435 4 1761 144 79 20 chr2 6948914 6949268 -243738586 - THE1C LTR MaLR 0 375 1 326 296 82 60 chr2 6949624 6949857 -243737997 + MIR SINE MIR 20 257 -5 1421 248 86 9 chr2 6949893 6950348 -243737506 - MLT1E2 LTR MaLR 0 626 137 182 269 31 125 chr2 6950512 6950672 -243737182 + MIR SINE MIR 68 212 -50 26 0 0 0 chr2 6950805 6950831 -243737023 + AT_rich Low_complexity Low_complexity 1 26 0 12878 167 56 10 chr2 6950832 6956789 -243731065 - L1PB1 LINE L1 -1 6866 636 994 183 5 0 chr2 6956791 6956988 -243730866 - L1PB1 LINE L1 -6663 200 3 184 315 0 19 chr2 6957525 6957579 -243730275 + MIR SINE MIR 23 75 -187 217 320 57 41 chr2 6957878 6958000 -243729854 - MIR SINE MIR -137 125 2 1379 246 47 27 chr2 6959335 6959783 -243728071 + LTR40b LTR ERVL 6 462 0 290 215 31 0 chr2 6959845 6959910 -243727944 + HERVL40 LTR ERVL 2830 2896 -2634 845 265 13 22 chr2 6961000 6961331 -243726523 + HERVL40 LTR ERVL 2779 5505 -25 1107 276 63 15 chr2 6961353 6961763 -243726091 + LTR40b LTR ERVL 1 430 -32 433 257 138 84 chr2 6961787 6962083 -243725771 + L2 LINE L2 2994 3305 -8 2238 119 0 0 chr2 6963581 6963875 -243723979 + AluSg SINE Alu 1 294 -16 312 296 136 12 chr2 6964130 6964299 -243723555 - L1ME2 LINE L1 -226 5938 5749 201 262 0 0 chr2 6966112 6966154 -243721700 + T-rich Low_complexity Low_complexity 3 44 0 662 311 19 0 chr2 6967138 6967350 -243720504 - MIR SINE MIR 0 262 47 364 355 11 26 chr2 6968325 6968514 -243719340 - MER5A DNA MER1_type -3 186 1 1385 259 25 57 chr2 6968968 6969701 -243718153 - L1M4 LINE L1 -2203 4179 3471 2111 132 0 0 chr2 6969880 6970168 -243717686 + AluSx SINE Alu 1 288 -24 26 30 0 0 chr2 6970193 6970226 -243717628 + AT_rich Low_complexity Low_complexity 1 33 0 334 246 165 50 chr2 6970226 6970455 -243717399 - L1ME LINE L1 -5477 593 329 186 43 0 0 chr2 6970455 6970478 -243717376 + (TTCTC)n Simple_repeat Simple_repeat 2 24 0 334 246 165 50 chr2 6970478 6970508 -243717346 - L1ME LINE L1 -5741 329 304 490 281 25 20 chr2 6970520 6970716 -243717138 - L1ME LINE L1 -5867 203 7 245 325 17 38 chr2 6970804 6971044 -243716810 - L1MEc LINE L1 -4781 1436 1202 1191 218 128 22 chr2 6971054 6971421 -243716433 + LTR52 LTR ERVL 1 406 -15 375 336 40 57 chr2 6971530 6972695 -243715159 - L1MEc LINE L1 -5176 1220 76 425 224 9 9 chr2 6973205 6973312 -243714542 + L1M4 LINE L1 4898 5004 -1142 224 308 112 65 chr2 6973463 6973632 -243714222 - L2 LINE L2 -158 3114 2938 248 230 143 0 chr2 6974567 6974693 -243713161 + L1ME4a LINE L1 5977 6120 -1 32 86 0 0 chr2 6974743 6974824 -243713030 + AT_rich Low_complexity Low_complexity 1 81 0 467 89 0 13 chr2 6975636 6975715 -243712139 + (GA)n Simple_repeat Simple_repeat 1 78 0 875 186 94 144 chr2 6975715 6976096 -243711758 - MLT1A1 LTR MaLR -3 362 1 218 200 0 20 chr2 6976096 6976146 -243711708 + GA-rich Low_complexity Low_complexity 1 49 0 1431 50 0 0 chr2 6976187 6976367 -243711487 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 243 88 0 0 chr2 6976367 6976401 -243711453 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 295 250 0 93 chr2 6977395 6977456 -243710398 - L2 LINE L2 -38 3275 3227 2074 169 25 0 chr2 6977456 6977810 -243710044 + THE1B LTR MaLR 2 364 0 295 250 0 93 chr2 6977810 6977856 -243709998 - L2 LINE L2 -86 3227 3178 206 337 11 11 chr2 6978215 6978310 -243709544 - L2 LINE L2 -571 2743 2649 1776 181 68 32 chr2 6978551 6978992 -243708862 - LTR2B LTR ERV1 0 490 34 955 322 123 4 chr2 6979374 6979828 -243708026 + L2 LINE L2 2208 2715 -599 21 36 0 0 chr2 6979829 6979857 -243707997 + AT_rich Low_complexity Low_complexity 1 28 0 301 349 90 42 chr2 6980265 6980454 -243707400 - L2 LINE L2 0 3272 3075 359 195 0 12 chr2 6981011 6981093 -243706761 - L1MA5 LINE L1 -6 6294 6214 1297 194 3 3 chr2 6981093 6981377 -243706477 + L1 LINE L1 4960 5243 -903 183 333 0 0 chr2 6982693 6982756 -243705098 + L2 LINE L2 3176 3238 -75 5290 66 25 29 chr2 6984427 6985196 -243702658 - MER4E LTR ERV1 0 766 1 561 240 5 163 chr2 6986107 6986328 -243701526 - MER5A DNA MER1_type -3 186 1 430 192 30 114 chr2 6986433 6986600 -243701254 + MER69A DNA AcHobo 6 158 -19 429 137 26 0 chr2 6986643 6986760 -243701094 + (TA)n Simple_repeat Simple_repeat 1 120 0 208 356 0 11 chr2 6987044 6987134 -243700720 + L2 LINE L2 3213 3301 -12 358 328 78 10 chr2 6987216 6987420 -243700434 - MIR SINE MIR -39 223 6 2328 105 3 0 chr2 6987457 6987761 -243700093 + AluSp SINE Alu 4 308 -5 525 142 35 0 chr2 6988739 6988908 -243698946 + (TA)n Simple_repeat Simple_repeat 2 176 0 35 0 0 0 chr2 6988911 6988946 -243698908 + AT_rich Low_complexity Low_complexity 1 35 0 192 300 125 33 chr2 6991146 6991266 -243696588 - L2 LINE L2 -4 3268 3138 23 0 0 0 chr2 6991467 6991490 -243696364 + AT_rich Low_complexity Low_complexity 1 23 0 225 191 0 0 chr2 6992065 6992107 -243695747 + (CA)n Simple_repeat Simple_repeat 2 43 0 1991 147 7 0 chr2 6992793 6993086 -243694768 - AluSx SINE Alu -17 295 1 730 242 28 22 chr2 6993175 6993357 -243694497 + MER5A DNA MER1_type 1 183 -6 472 139 13 0 chr2 6993995 6994074 -243693780 + MADE1 DNA Mariner 1 80 0 196 333 26 9 chr2 6994118 6994232 -243693622 - MIR3 SINE MIR -6 202 87 427 287 187 5 chr2 6994404 6994613 -243693241 - Charlie8 DNA MER1_type -2161 256 10 341 333 0 0 chr2 6994956 6995046 -243692808 - MER5B DNA MER1_type -25 153 64 21 0 0 0 chr2 6995846 6995867 -243691987 + AT_rich Low_complexity Low_complexity 1 21 0 721 315 58 46 chr2 6996210 6996626 -243691228 - L2 LINE L2 -804 2510 2090 225 180 0 0 chr2 6996639 6996689 -243691165 + (TA)n Simple_repeat Simple_repeat 2 51 0 194 284 149 0 chr2 6996692 6996826 -243691028 + L2 LINE L2 3098 3251 -62 1568 307 109 42 chr2 6996974 6998404 -243689450 + L1ME3A LINE L1 3806 5331 -815 252 347 10 15 chr2 6998437 6998633 -243689221 + L1P5 LINE L1 5378 5572 -584 442 321 141 17 chr2 6998647 6998946 -243688908 + L1ME3A LINE L1 5619 5954 -216 3085 129 18 60 chr2 6999355 6999905 -243687949 - MER1A DNA MER1_type 0 527 1 683 314 9 14 chr2 7000957 7001177 -243686677 + MIR SINE MIR 31 249 -13 228 35 0 0 chr2 7002396 7002425 -243685429 + (TG)n Simple_repeat Simple_repeat 1 29 0 2085 149 21 21 chr2 7002799 7003174 -243684680 - THE1C LTR MaLR 0 375 1 379 292 35 70 chr2 7003577 7003892 -243683962 - L1ME LINE L1 -335 5786 5483 258 150 0 0 chr2 7004602 7004642 -243683212 + L2 LINE L2 3255 3294 -19 1112 153 0 0 chr2 7005189 7005373 -243682481 - AluSg/x SINE Alu 0 314 131 295 266 53 72 chr2 7005527 7005734 -243682120 - MLT1I LTR MaLR -16 393 191 327 49 0 0 chr2 7006001 7006042 -243681812 + (TC)n Simple_repeat Simple_repeat 1 41 0 246 32 0 0 chr2 7006041 7006072 -243681782 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 2160 113 0 7 chr2 7006751 7007043 -243680811 + AluSg SINE Alu 1 290 -20 255 292 0 21 chr2 7007130 7007226 -243680628 - MLT1J LTR MaLR -145 366 273 228 300 11 11 chr2 7007287 7007377 -243680477 - MLT1L LTR MaLR -354 261 172 1861 131 34 14 chr2 7007405 7007696 -243680158 - AluJo SINE Alu -4 308 12 510 295 62 29 chr2 7007836 7008077 -243679777 + MIR SINE MIR 2 250 -12 376 319 223 15 chr2 7008435 7009021 -243678833 + L2 LINE L2 2593 3308 -5 276 335 63 13 chr2 7010155 7010313 -243677541 - MIR SINE MIR -75 187 22 647 143 9 9 chr2 7010448 7010560 -243677294 - AluSg/x SINE Alu -12 300 189 1235 178 36 112 chr2 7011356 7011749 -243676105 + MLT1A1 LTR MaLR 3 365 0 360 229 201 14 chr2 7011882 7012026 -243675828 + MIR SINE MIR 22 192 -70 208 361 0 10 chr2 7015681 7015778 -243672076 + L2 LINE L2 3168 3263 -50 522 284 36 105 chr2 7016035 7016397 -243671457 + MLT1I LTR MaLR 71 407 -2 227 315 120 9 chr2 7016747 7016855 -243670999 - L2 LINE L2 0 3313 3194 632 228 55 22 chr2 7016860 7017042 -243670812 + MER3 DNA MER1_type 1 141 -68 309 281 110 44 chr2 7017280 7017597 -243670257 - L2 LINE L2 -126 3187 2850 25 31 0 0 chr2 7017906 7017938 -243669916 + AT_rich Low_complexity Low_complexity 1 32 0 32 0 0 0 chr2 7018650 7018682 -243669172 + AT_rich Low_complexity Low_complexity 1 32 0 1609 196 7 4 chr2 7018684 7018965 -243668889 - AluJo SINE Alu -30 282 1 305 248 137 0 chr2 7020970 7021087 -243666767 + L2 LINE L2 2060 2192 -1122 839 287 90 61 chr2 7021196 7021240 -243666614 + L2 LINE L2 2575 2616 -697 1032 269 108 70 chr2 7021240 7021767 -243666087 + MLT1H LTR MaLR 1 547 -2 839 287 90 61 chr2 7021767 7022430 -243665424 + L2 LINE L2 2616 3313 0 2163 140 33 36 chr2 7022544 7022908 -243664946 - THE1B LTR MaLR -1 363 1 22 0 0 0 chr2 7023044 7023066 -243664788 + AT_rich Low_complexity Low_complexity 1 22 0 525 324 155 44 chr2 7023358 7024205 -243663649 + L3 LINE CR1 634 1574 -3 495 348 79 12 chr2 7024549 7024802 -243663052 + L3 LINE CR1 364 633 -944 382 279 82 123 chr2 7024961 7025061 -243662793 + L3 LINE CR1 931 1034 -543 2044 126 0 3 chr2 7025061 7025346 -243662508 + AluSc SINE Alu 1 284 -25 315 0 0 0 chr2 7025350 7025385 -243662469 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 382 279 82 123 chr2 7025385 7025620 -243662234 + L3 LINE CR1 1037 1257 -320 266 283 57 9 chr2 7027595 7027701 -243660153 - MIR SINE MIR -47 215 105 429 305 92 17 chr2 7027863 7028037 -243659817 - MIR SINE MIR -28 234 48 271 396 35 30 chr2 7029588 7029757 -243658097 + MIR3 SINE MIR 8 177 -31 248 323 32 0 chr2 7029970 7030063 -243657791 - MIR SINE MIR -76 186 91 230 252 50 59 chr2 7030388 7030507 -243657347 - MIR SINE MIR -29 233 116 328 278 56 76 chr2 7030661 7030963 -243656891 + MLT1I LTR MaLR 97 392 -17 27 22 0 22 chr2 7031190 7031211 -243656643 + AT_rich Low_complexity Low_complexity 1 21 -23 2205 97 7 0 chr2 7031211 7031500 -243656354 - AluSg SINE Alu -19 291 1 27 22 0 22 chr2 7031500 7031523 -243656331 + AT_rich Low_complexity Low_complexity 21 44 0 373 324 9 0 chr2 7032196 7032307 -243655547 + MER81 DNA DNA 3 114 0 364 273 23 0 chr2 7032602 7032690 -243655164 + MER5B DNA MER1_type 17 106 -72 184 308 0 0 chr2 7032747 7032799 -243655055 + MER5B DNA MER1_type 126 177 -1 2677 215 21 57 chr2 7033940 7034567 -243653287 + MER77 LTR ERV1 2 605 0 2130 149 41 3 chr2 7034592 7034934 -243652920 - THE1A LTR MaLR 0 355 1 12009 106 11 0 chr2 7034934 7036496 -243651358 - THE1A-int LTR MaLR 0 1580 1 2423 119 35 6 chr2 7036497 7036841 -243651013 - THE1A LTR MaLR -1 354 1 651 291 29 107 chr2 7037554 7038076 -243649778 + MER34 LTR ERV1 1 481 -61 1371 186 41 11 chr2 7038182 7038451 -243649403 - AluJb SINE Alu -24 288 12 2653 108 6 0 chr2 7038451 7038804 -243649050 - THE1A LTR MaLR 0 355 1 12322 95 10 1 chr2 7038804 7040368 -243647486 - THE1A-int LTR MaLR 0 1580 3 2544 108 35 3 chr2 7040370 7040714 -243647140 - THE1A LTR MaLR 0 355 1 1706 178 3 3 chr2 7041958 7042244 -243645610 - AluJb SINE Alu -11 301 16 198 288 51 0 chr2 7042444 7042503 -243645351 + L2 LINE L2 3252 3313 0 218 377 28 0 chr2 7043182 7043288 -243644566 - L2 LINE L2 -5 3308 3200 249 128 0 0 chr2 7043688 7043735 -243644119 + (TG)n Simple_repeat Simple_repeat 2 48 0 287 319 109 57 chr2 7044085 7044471 -243643383 - L2 LINE L2 -8 3305 2900 21 0 0 0 chr2 7045023 7045044 -243642810 + AT_rich Low_complexity Low_complexity 1 21 0 221 160 0 20 chr2 7045285 7045335 -243642519 + CT-rich Low_complexity Low_complexity 3 51 0 914 280 114 15 chr2 7045392 7046001 -243641853 - L1ME3A LINE L1 -226 5944 5262 2140 131 111 57 chr2 7046077 7046483 -243641371 - MSTA LTR MaLR 0 428 1 1562 226 30 117 chr2 7046870 7047709 -243640145 - L1ME3A LINE L1 -1483 4663 3898 4263 165 20 17 chr2 7047709 7048424 -243639430 + MER50 LTR ERV1 1 717 -17 659 251 53 5 chr2 7048429 7048636 -243639218 - L1ME3A LINE L1 -2254 3892 3676 691 213 38 6 chr2 7048637 7048797 -243639057 - LTR52 LTR ERVL -2 419 255 918 251 109 34 chr2 7048925 7049491 -243638363 - L1ME3A LINE L1 -2468 3678 3070 453 220 159 28 chr2 7050387 7050569 -243637285 - L1M4 LINE L1 -1479 4667 4462 304 302 163 6 chr2 7050680 7050852 -243637002 - L3 LINE CR1 -97 1480 1282 203 217 65 0 chr2 7051515 7051561 -243636293 - MIR SINE MIR -88 174 126 228 319 34 25 chr2 7051806 7051925 -243635929 - MIR SINE MIR -34 228 109 2195 172 40 27 chr2 7051925 7052468 -243635386 + MLT2A2 LTR ERVL 1 554 0 4020 154 53 80 chr2 7052566 7053370 -243634484 - LTR1 LTR ERV1 0 785 3 2145 156 21 32 chr2 7053682 7054061 -243633793 - THE1C LTR MaLR 0 375 1 246 235 73 0 chr2 7055993 7056061 -243631793 + MIR SINE MIR 19 91 -117 2807 95 8 0 chr2 7056136 7056495 -243631359 - THE1B LTR MaLR -2 362 1 1614 114 5 0 chr2 7057444 7057663 -243630191 + AluSq SINE Alu 78 297 -16 734 260 29 19 chr2 7058996 7059204 -243628650 - MER63A DNA MER1_type 0 210 1 387 0 0 0 chr2 7059498 7059541 -243628313 + (CA)n Simple_repeat Simple_repeat 1 43 0 27 29 0 0 chr2 7061682 7061716 -243626138 + AT_rich Low_complexity Low_complexity 1 34 0 2901 198 101 26 chr2 7062174 7062915 -243624939 + MER63D DNA MER1_type 1 797 -264 564 229 0 0 chr2 7062913 7063018 -243624836 + MER63D DNA MER1_type 956 1060 -2 * 213 39 0 0 chr2 7063740 7063766 -243624088 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 182 36 0 36 chr2 7064359 7064387 -243623467 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 198 299 42 49 chr2 7064577 7064721 -243623133 + MIR SINE MIR 20 162 -100 237 257 138 18 chr2 7065963 7066072 -243621782 + L3 LINE CR1 1406 1527 -50 218 235 20 0 chr2 7069035 7069086 -243618768 + CT-rich Low_complexity Low_complexity 3 54 0 363 314 109 46 chr2 7069871 7070009 -243617845 + MIR SINE MIR 7 160 -102 2209 106 27 7 chr2 7070009 7070310 -243617544 + AluSg SINE Alu 1 307 -3 363 314 109 46 chr2 7070310 7070346 -243617508 + MIR SINE MIR 160 192 -70 193 279 63 13 chr2 7070574 7070653 -243617201 + L2 LINE L2 2772 2854 -460 221 351 98 44 chr2 7070722 7070947 -243616907 + L2 LINE L2 3004 3240 -32 2270 121 0 0 chr2 7071016 7071321 -243616533 - AluSg SINE Alu -5 305 1 848 145 0 0 chr2 7071832 7072009 -243615845 + AluSg/x SINE Alu 166 310 0 380 336 23 0 chr2 7072009 7072137 -243615717 - L2 LINE L2 -620 2694 2564 1013 159 25 0 chr2 7072162 7072319 -243615535 - AluSg/x SINE Alu -14 298 138 1793 283 114 34 chr2 7072322 7073236 -243614618 - L2 LINE L2 -773 2541 1555 525 121 0 0 chr2 7073798 7073881 -243613973 + (TTTC)n Simple_repeat Simple_repeat 1 83 0 843 114 13 7 chr2 7073898 7074047 -243613807 + (TTCTC)n Simple_repeat Simple_repeat 5 154 0 1357 160 94 22 chr2 7074049 7074324 -243613530 - AluJo SINE Alu -17 295 1 252 143 45 36 chr2 7074506 7074618 -243613236 + (TA)n Simple_repeat Simple_repeat 1 113 0 252 317 108 17 chr2 7074634 7074754 -243613100 - MIR SINE MIR -112 150 20 26 50 0 0 chr2 7074921 7074961 -243612893 + AT_rich Low_complexity Low_complexity 1 40 0 210 273 0 0 chr2 7075378 7075433 -243612421 + (TA)n Simple_repeat Simple_repeat 2 56 0 1944 131 0 4 chr2 7075592 7075867 -243611987 - AluSx SINE Alu -38 274 1 237 65 0 0 chr2 7076434 7076465 -243611389 + (TG)n Simple_repeat Simple_repeat 2 32 0 251 170 0 0 chr2 7076628 7076675 -243611179 + L1ME LINE L1 98 144 -5926 190 158 0 26 chr2 7077000 7077038 -243610816 + MIR SINE MIR 112 148 -60 279 292 94 74 chr2 7078025 7078227 -243609627 - MIR3 SINE MIR -2 206 1 304 277 56 97 chr2 7078622 7078706 -243609148 - MIR SINE MIR -13 249 163 1572 207 53 68 chr2 7078706 7079102 -243608752 - MLT1B LTR MaLR 0 390 1 304 277 56 97 chr2 7079102 7079212 -243608642 - MIR SINE MIR -99 163 63 287 336 88 13 chr2 7080020 7080246 -243607608 + MIR SINE MIR 10 252 -10 1693 178 0 0 chr2 7080288 7080564 -243607290 + AluJo SINE Alu 31 306 -6 252 289 218 13 chr2 7081170 7081326 -243606528 - MIR SINE MIR -72 190 3 354 306 108 35 chr2 7081334 7081566 -243606288 - MIR SINE MIR 0 262 14 2261 135 42 8 chr2 7081566 7081943 -243605911 - MLT1B LTR MaLR 0 390 1 2170 105 3 22 chr2 7083479 7083794 -243604060 + AluSx SINE Alu 1 309 -3 1125 282 61 16 chr2 7084869 7085434 -243602420 + MER20B DNA MER1_type 10 643 -140 815 174 0 36 chr2 7085452 7085590 -243602264 + FLAM_C SINE Alu 1 133 0 329 321 95 54 chr2 7086072 7086440 -243601414 - L1ME LINE L1 -460 5702 5320 232 281 61 79 chr2 7087735 7087849 -243600005 - L2 LINE L2 -31 3282 3171 409 299 44 0 chr2 7088194 7088331 -243599523 - MIR3 SINE MIR -50 158 16 204 40 0 0 chr2 7088441 7088466 -243599388 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 190 269 128 13 chr2 7088576 7088654 -243599200 + L2 LINE L2 3147 3233 -39 821 277 139 30 chr2 7088770 7089239 -243598615 - LTR33A LTR ERVL 0 523 4 243 330 161 0 chr2 7089991 7090209 -243597645 - MIR SINE MIR -1 261 9 2366 86 201 5 chr2 7090435 7090809 -243597045 - LTR7 LTR ERV1 -3 447 1 360 307 97 38 chr2 7090825 7091063 -243596791 - MIR SINE MIR -9 253 2 219 337 142 30 chr2 7092590 7092759 -243595095 - MIR3 SINE MIR -11 197 10 546 157 9 52 chr2 7093199 7093314 -243594540 - MER3 DNA MER1_type -1 208 99 249 108 0 0 chr2 7093314 7093351 -243594503 + (T)n Simple_repeat Simple_repeat 1 37 0 6465 108 15 14 chr2 7093354 7094818 -243593036 - L1PA15 LINE L1 0 6165 4678 616 184 37 0 chr2 7094818 7094927 -243592927 - MER3 DNA MER1_type -96 113 1 216 331 66 54 chr2 7095099 7095265 -243592589 + L2 LINE L2 3098 3265 -7 1660 166 21 21 chr2 7095527 7095810 -243592044 + MER49 LTR ERV1 3 285 -638 1455 219 20 34 chr2 7095840 7096192 -243591662 + MER4D LTR ERV1 549 895 -8 400 181 52 26 chr2 7096855 7096971 -243590883 - LTR48 LTR ERV1 -48 739 621 1482 131 146 33 chr2 7096998 7097332 -243590522 - LTR49 LTR ERV1 -251 344 1 26 30 0 0 chr2 7097343 7097376 -243590478 + AT_rich Low_complexity Low_complexity 1 33 0 417 20 0 0 chr2 7099351 7099401 -243588453 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 804 240 16 87 chr2 7099495 7099737 -243588117 + AluJo SINE Alu 47 271 -41 664 241 48 28 chr2 7099786 7100083 -243587771 - L1M4 LINE L1 -2797 3349 3042 2544 58 0 0 chr2 7100083 7100391 -243587463 - AluY SINE Alu -3 308 1 664 241 48 28 chr2 7100391 7100445 -243587409 - L1M4 LINE L1 -3104 3042 2991 226 307 107 60 chr2 7100552 7100702 -243587152 + MIR SINE MIR 28 184 -78 385 274 109 57 chr2 7100915 7101145 -243586709 - MIR SINE MIR -9 253 12 265 273 75 68 chr2 7101936 7102097 -243585757 + MIR3 SINE MIR 3 164 -44 2191 109 7 0 chr2 7102553 7102846 -243585008 + AluSx SINE Alu 5 299 -13 1831 189 46 38 chr2 7103419 7103790 -243584064 + MLT1A2 LTR MaLR 1 374 0 3451 118 70 62 chr2 7104226 7104541 -243583313 - LTR29 LTR ERV1 0 622 298 2038 110 69 7 chr2 7104541 7104832 -243583022 - AluSq SINE Alu 0 313 5 3451 118 70 62 chr2 7104832 7105133 -243582721 - LTR29 LTR ERV1 -324 298 1 1643 210 52 9 chr2 7105305 7105653 -243582201 + MLT1A1 LTR MaLR 1 363 -2 664 271 66 6 chr2 7106306 7106472 -243581382 - AluJb SINE Alu 0 312 137 252 337 12 0 chr2 7106780 7106866 -243580988 + MIR SINE MIR 30 116 -92 2386 133 10 41 chr2 7107181 7107594 -243580260 + MER57A LTR ERV1 4 403 0 1863 116 0 8 chr2 7109129 7109387 -243578467 + AluSc SINE Alu 44 299 -10 25 65 0 0 chr2 7109812 7109858 -243577996 + AT_rich Low_complexity Low_complexity 1 46 0 585 237 95 25 chr2 7110045 7110266 -243577588 - L1MC4a LINE L1 -5 7803 6111 649 87 22 0 chr2 7110319 7110411 -243577443 - AluSc SINE Alu -7 302 209 228 35 0 0 chr2 7110443 7110472 -243577382 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 305 123 70 0 chr2 7110472 7110529 -243577325 - AluJ/FRAM SINE Alu -16 286 226 2135 82 7 21 chr2 7110896 7111187 -243576667 - AluSg SINE Alu -23 287 1 21 0 0 0 chr2 7111193 7111214 -243576640 + AT_rich Low_complexity Low_complexity 1 21 0 626 294 70 22 chr2 7111701 7111929 -243575925 - MIR SINE MIR -21 241 3 38 0 0 0 chr2 7112047 7112085 -243575769 + AT_rich Low_complexity Low_complexity 1 38 0 5840 32 5 0 chr2 7112085 7112736 -243575118 - L1PA5 LINE L1 -11 6143 5490 189 338 50 12 chr2 7113002 7113082 -243574772 - L2 LINE L2 -222 3050 2968 843 152 0 8 chr2 7113139 7113271 -243574583 - AluJb SINE Alu -181 131 1 2509 117 29 49 chr2 7113389 7113774 -243574080 + MER51B LTR ERV1 1 377 0 1814 153 28 93 chr2 7113988 7114387 -243573467 - THE1C LTR MaLR -2 373 1 306 164 0 0 chr2 7115145 7115200 -243572654 + T-rich Low_complexity Low_complexity 1 55 0 265 316 175 0 chr2 7115960 7116074 -243571780 + MIR3 SINE MIR 56 189 -19 3275 196 64 3 chr2 7116137 7116825 -243571029 - MER44D DNA MER2_type 0 605 4 1646 179 47 6 chr2 7117783 7118147 -243569707 + MLT1B LTR MaLR 1 379 -11 681 184 40 40 chr2 7118365 7118539 -243569315 + MER5B DNA MER1_type 5 178 0 218 32 32 0 chr2 7120243 7120274 -243567580 + (TG)n Simple_repeat Simple_repeat 2 33 0 226 254 0 0 chr2 7120407 7120462 -243567392 + (TA)n Simple_repeat Simple_repeat 1 55 0 2187 102 30 0 chr2 7120614 7120909 -243566945 + AluSx SINE Alu 1 304 -8 242 341 0 24 chr2 7120938 7121064 -243566790 + MIR SINE MIR 2 122 -86 1592 186 0 28 chr2 7121637 7121927 -243565927 + AluJo SINE Alu 1 282 -30 1265 202 4 0 chr2 7122046 7122279 -243565575 + MER46A DNA MER2_type 3 236 0 371 302 119 13 chr2 7122508 7122667 -243565187 - MIR SINE MIR -77 185 10 396 287 16 23 chr2 7123906 7124035 -243563819 - MIR SINE MIR -107 155 28 234 320 24 40 chr2 7124647 7124772 -243563082 + MIR SINE MIR 22 144 -118 250 322 70 35 chr2 7125084 7125199 -243562655 + MIR SINE MIR 62 180 -82 1211 256 77 35 chr2 7126596 7127131 -243560723 - MER77 LTR ERV1 -4 601 45 380 392 14 5 chr2 7127134 7127351 -243560503 + L2 LINE L2 2579 2797 -517 31 0 0 0 chr2 7127413 7127444 -243560410 + AT_rich Low_complexity Low_complexity 1 31 0 282 317 67 8 chr2 7127668 7127788 -243560066 + MIR SINE MIR 2 128 -134 2416 82 0 22 chr2 7127850 7128166 -243559688 - AluSg SINE Alu -1 309 1 272 338 0 0 chr2 7128194 7128271 -243559583 - L2 LINE L2 -38 3275 3199 190 300 17 17 chr2 7129051 7129111 -243558743 + MIR SINE MIR 8 67 -195 1031 171 17 11 chr2 7129507 7129688 -243558166 + AluJo SINE Alu 99 280 -32 257 0 30 0 chr2 7129863 7129896 -243557958 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 295 65 0 0 chr2 7130317 7130363 -243557491 - MADE1 DNA Mariner -34 46 1 206 338 0 0 chr2 7131426 7131494 -243556360 - L2 LINE L2 -216 3056 2989 260 373 127 19 chr2 7132957 7133169 -243554685 - MIR SINE MIR -8 254 20 184 53 53 26 chr2 7133184 7133222 -243554632 + T-rich Low_complexity Low_complexity 2 40 0 1327 164 52 36 chr2 7133299 7133604 -243554250 + THE1C LTR MaLR 66 375 0 189 415 0 0 chr2 7133667 7133720 -243554134 - L2 LINE L2 -99 3173 3121 280 294 53 29 chr2 7133731 7133901 -243553953 - L2 LINE L2 -1 3312 3139 5089 166 26 8 chr2 7134872 7135037 -243552817 - L1MA10 LINE L1 -1 6333 6172 306 50 0 0 chr2 7135037 7135077 -243552777 + (TG)n Simple_repeat Simple_repeat 2 41 0 5089 166 26 8 chr2 7135077 7135909 -243551945 - L1MA10 LINE L1 -162 6172 5318 1675 182 34 16 chr2 7135966 7136351 -243551503 + L1 LINE L1 4867 5258 -888 204 41 61 61 chr2 7136643 7136692 -243551162 + A-rich Low_complexity Low_complexity 1 49 0 333 241 0 13 chr2 7137868 7137947 -243549907 - MLT1I LTR MaLR -234 175 98 356 280 63 118 chr2 7138816 7139380 -243548474 + L2 LINE L2 2587 3054 -218 316 295 139 16 chr2 7139514 7139636 -243548218 + L2 LINE L2 3136 3272 0 186 43 0 0 chr2 7140454 7140477 -243547377 + (T)n Simple_repeat Simple_repeat 1 23 0 23 0 0 0 chr2 7140834 7140857 -243546997 + AT_rich Low_complexity Low_complexity 1 23 0 1307 177 83 36 chr2 7141283 7141560 -243546294 - AluJo SINE Alu -19 293 4 1606 171 44 83 chr2 7141776 7141916 -243545938 - MER57A LTR ERV1 0 403 259 2336 117 0 0 chr2 7141916 7142224 -243545630 + AluSx SINE Alu 1 308 -4 264 30 0 0 chr2 7142224 7142257 -243545597 + (GA)n Simple_repeat Simple_repeat 2 34 0 1606 171 44 83 chr2 7142257 7142525 -243545329 - MER57A LTR ERV1 -142 261 10 396 321 50 36 chr2 7143589 7143953 -243543901 + L1ME LINE L1 4104 4472 -1674 22 0 0 0 chr2 7144385 7144407 -243543447 + AT_rich Low_complexity Low_complexity 1 22 0 571 216 78 6 chr2 7144440 7144607 -243543247 + MER3 DNA MER1_type 31 209 0 380 277 115 74 chr2 7144689 7144985 -243542869 + L1ME LINE L1 5492 5799 -322 279 185 21 69 chr2 7145128 7145317 -243542537 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 24 0 0 0 chr2 7145798 7145822 -243542032 + AT_rich Low_complexity Low_complexity 1 24 0 764 212 0 0 chr2 7145822 7145954 -243541900 - FLAM_C SINE Alu -1 132 1 305 312 89 51 chr2 7146510 7146667 -243541187 - MIR3 SINE MIR -11 197 35 286 341 24 0 chr2 7147327 7147450 -243540404 + MLT-int LTR MaLR 423 548 -1187 280 218 7 127 chr2 7148059 7148201 -243539653 + MLT1E-int LTR MaLR 1032 1156 -215 226 237 13 40 chr2 7148767 7148781 -243539073 + MLT1G1 LTR MaLR 522 535 -60 2470 107 27 36 chr2 7148781 7149193 -243538661 + L1PA13 LINE L1 5752 6159 -4 226 237 13 40 chr2 7149193 7149254 -243538600 + MLT1G1 LTR MaLR 535 595 0 502 284 75 8 chr2 7149259 7149498 -243538356 + HAL1 LINE L1 1505 1759 -748 772 171 20 0 chr2 7149498 7149650 -243538204 + LTR49 LTR ERV1 1 155 -440 246 283 30 20 chr2 7150572 7150671 -243537183 - L2 LINE L2 -243 3070 2971 260 331 279 3 chr2 7150862 7151149 -243536705 + L2 LINE L2 2371 2736 -578 377 321 165 52 chr2 7151266 7152012 -243535842 - L2 LINE L2 0 3313 2480 379 263 83 3 chr2 7152743 7153054 -243534800 - L1MEc LINE L1 -1599 4616 4244 354 328 29 8 chr2 7153312 7153556 -243534298 - L1MEc LINE L1 -3138 3077 2829 323 329 62 44 chr2 7153665 7153939 -243533915 - L1MEc LINE L1 -3528 2687 2409 1268 288 98 34 chr2 7153988 7154541 -243533313 + MLT1E LTR MaLR 6 593 0 310 280 28 42 chr2 7154541 7154684 -243533170 - L1MEc LINE L1 -4051 2345 2205 337 242 114 15 chr2 7155399 7155531 -243532323 - L1MC5 LINE L1 -35 7926 7782 463 240 7 13 chr2 7156106 7156260 -243531594 - L1MB8 LINE L1 -2 6176 6024 1009 314 92 42 chr2 7156379 7156711 -243531143 - L1M4 LINE L1 -1712 4434 4120 2141 123 48 28 chr2 7156711 7157068 -243530786 - THE1B LTR MaLR 0 364 1 11120 109 4 5 chr2 7157068 7158650 -243529204 - THE1B-int LTR MaLR 0 1580 1 2159 121 51 28 chr2 7158650 7159006 -243528848 - THE1B LTR MaLR 0 364 1 1009 314 92 42 chr2 7159006 7159390 -243528464 - L1M4 LINE L1 -2025 4121 3680 24 0 0 0 chr2 7159676 7159700 -243528154 + AT_rich Low_complexity Low_complexity 1 24 0 228 277 27 45 chr2 7160098 7160210 -243527644 - L1M4 LINE L1 -1907 4239 4130 189 279 82 33 chr2 7160234 7160295 -243527559 - L2 LINE L2 -49 3223 3160 266 320 103 16 chr2 7160346 7160540 -243527314 + L2 LINE L2 3102 3312 -1 405 337 10 10 chr2 7160544 7160743 -243527111 + MER58A DNA MER1_type 4 202 -22 540 85 11 79 chr2 7161823 7162000 -243525854 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 200 136 51 17 chr2 7162003 7162062 -243525792 + (CA)n Simple_repeat Simple_repeat 1 61 0 233 299 21 25 chr2 7162076 7162218 -243525636 + CT-rich Low_complexity Low_complexity 4 236 0 237 306 0 0 chr2 7163215 7163277 -243524577 + C-rich Low_complexity Low_complexity 1 62 0 191 320 100 0 chr2 7163317 7163417 -243524437 + L2 LINE L2 2995 3104 -168 192 250 0 0 chr2 7163471 7163507 -243524347 + L2 LINE L2 3182 3217 -96 270 261 56 72 chr2 7163707 7163887 -243523967 + L2 LINE L2 3117 3293 -20 180 0 0 0 chr2 7163929 7163949 -243523905 + (GAAA)n Simple_repeat Simple_repeat 2 21 0 210 37 0 0 chr2 7164267 7164294 -243523560 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 764 174 114 0 chr2 7164669 7164836 -243523018 - MER5A DNA MER1_type -3 186 1 891 282 32 16 chr2 7165845 7166097 -243521757 + MIR SINE MIR 3 258 -4 299 276 35 43 chr2 7166265 7166381 -243521473 + MIR3 SINE MIR 13 127 -81 307 315 31 39 chr2 7166716 7166843 -243521011 + MIR SINE MIR 17 142 -66 23 33 0 0 chr2 7167969 7167999 -243519855 + AT_rich Low_complexity Low_complexity 1 30 0 2041 129 86 9 chr2 7168426 7168774 -243519080 + THE1C LTR MaLR 1 375 0 221 260 0 0 chr2 7168847 7168897 -243518957 + (TTCA)n Simple_repeat Simple_repeat 1 50 0 451 130 67 27 chr2 7170126 7170599 -243517255 + (TG)n Simple_repeat Simple_repeat 1 491 0 226 113 56 14 chr2 7170611 7170682 -243517172 + (TG)n Simple_repeat Simple_repeat 2 75 0 371 231 56 37 chr2 7170875 7170983 -243516871 - LTR41 LTR ERVL -6 767 658 282 139 0 0 chr2 7171632 7171675 -243516179 - LTR41 LTR ERVL -730 43 1 28 71 0 0 chr2 7171803 7171859 -243515995 + AT_rich Low_complexity Low_complexity 1 56 0 2160 146 47 16 chr2 7172054 7172418 -243515436 + THE1C LTR MaLR 1 375 0 2437 132 0 0 chr2 7172444 7172801 -243515053 + THE1C-int LTR MaLR 15 371 -1209 602 150 71 7 chr2 7172928 7173068 -243514786 + THE1C-int LTR MaLR 1432 1580 0 2015 145 67 20 chr2 7173068 7173426 -243514428 + THE1C LTR MaLR 1 375 0 750 313 55 19 chr2 7173440 7173747 -243514107 + L2 LINE L2 2996 3313 0 1415 226 92 15 chr2 7174235 7174572 -243513282 + MLT1A1 LTR MaLR 3 365 0 494 89 0 111 chr2 7175379 7175469 -243512385 + MADE1 DNA Mariner 1 80 0 387 0 0 0 chr2 7175920 7175963 -243511891 + (CA)n Simple_repeat Simple_repeat 2 44 0 1575 162 19 15 chr2 7177027 7177122 -243510732 + AluSx SINE Alu 40 133 -179 234 0 0 0 chr2 7177122 7177148 -243510706 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1575 162 19 15 chr2 7177148 7177317 -243510537 + AluSx SINE Alu 133 305 -7 894 213 55 8 chr2 7177343 7177578 -243510276 - Zaphod DNA AcHobo -78 3953 3708 2138 172 0 18 chr2 7178356 7178699 -243509155 - MER1B DNA MER1_type 0 337 1 343 232 54 98 chr2 7179008 7179142 -243508712 - L1MC4a LINE L1 -322 5848 5719 188 388 16 16 chr2 7179821 7179942 -243507912 - L2 LINE L2 -4 3309 3189 314 292 60 64 chr2 7180001 7180234 -243507620 - L1M4 LINE L1 -3771 2375 2144 1164 228 49 62 chr2 7180265 7180655 -243507199 - MLT2C1 LTR ERVL -2 395 11 767 287 50 41 chr2 7181224 7181642 -243506212 - HAL1b LINE L1 -704 644 223 2111 115 3 3 chr2 7181647 7181952 -243505902 - AluSq SINE Alu -8 305 1 335 303 42 50 chr2 7183212 7183473 -243504381 + MER112 DNA MER1_type 2 260 0 26 50 0 0 chr2 7183666 7183706 -243504148 + AT_rich Low_complexity Low_complexity 1 40 0 265 283 120 0 chr2 7183755 7183847 -243504007 - MIR SINE MIR -85 123 21 3189 104 26 0 chr2 7184083 7184504 -243503350 - MER57B LTR ERV1 -2 432 1 360 247 0 12 chr2 7185691 7185772 -243502082 + L2 LINE L2 3234 3313 0 2896 135 29 0 chr2 7185913 7186327 -243501527 + MSTA LTR MaLR 2 427 -1 1620 107 21 4 chr2 7186464 7186698 -243501156 - AluSq SINE Alu -10 303 66 43 35 0 0 chr2 7187085 7187142 -243500712 + AT_rich Low_complexity Low_complexity 1 57 0 478 282 139 49 chr2 7187214 7187854 -243500000 - L2 LINE L2 -16 3297 2593 324 70 0 0 chr2 7187872 7187915 -243499939 + (CA)n Simple_repeat Simple_repeat 2 44 0 1097 177 65 140 chr2 7189008 7189393 -243498461 - MLT1B LTR MaLR 0 390 35 2558 94 6 17 chr2 7189394 7189754 -243498100 + L1PB1 LINE L1 5796 6151 0 25 0 0 0 chr2 7190238 7190263 -243497591 + AT_rich Low_complexity Low_complexity 1 25 0 269 298 128 0 chr2 7190327 7190421 -243497433 - L2 LINE L2 -2 3270 3165 2043 141 3 10 chr2 7190583 7190895 -243496959 - AluJb SINE Alu -2 310 1 222 333 39 0 chr2 7191363 7191441 -243496413 + L2 LINE L2 2879 2959 -355 239 308 31 0 chr2 7191611 7191676 -243496178 + L2 LINE L2 3246 3312 -1 449 264 71 65 chr2 7191786 7192168 -243495686 + L1 LINE L1 2648 3031 -3115 335 259 75 91 chr2 7192197 7192746 -243495108 + L1 LINE L1 3256 3789 -2357 2130 128 0 0 chr2 7192746 7193042 -243494812 + AluSg SINE Alu 1 296 -14 335 259 75 91 chr2 7193042 7193231 -243494623 + L1 LINE L1 3789 3979 -2167 228 265 59 0 chr2 7194697 7194765 -243493089 + MIR SINE MIR 106 177 -85 213 318 15 0 chr2 7195065 7195131 -243492723 + L2 LINE L2 3201 3267 -5 1571 161 63 100 chr2 7196448 7196827 -243491027 + MLT1A1 LTR MaLR 1 365 0 309 308 83 6 chr2 7197673 7197842 -243490012 - MIR SINE MIR -11 251 70 960 246 107 49 chr2 7197989 7198420 -243489434 - MLT1C LTR MaLR -3 464 9 22 0 0 0 chr2 7198744 7198766 -243489088 + AT_rich Low_complexity Low_complexity 1 22 0 1093 258 77 67 chr2 7200490 7200926 -243486928 - L1ME2 LINE L1 -208 5956 5504 2039 143 0 10 chr2 7200926 7201233 -243486621 + AluSx SINE Alu 1 304 -8 1093 258 77 67 chr2 7201233 7201477 -243486377 - L1ME2 LINE L1 -660 5504 5264 947 345 112 31 chr2 7201480 7202568 -243485286 + L2 LINE L2 2100 3272 0 206 62 31 0 chr2 7202900 7202932 -243484922 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1836 190 11 17 chr2 7205297 7205655 -243482199 + MLT1A2 LTR MaLR 8 363 -11 216 304 88 35 chr2 7205725 7205896 -243481958 + MER5A DNA MER1_type 4 183 -6 530 283 98 50 chr2 7206037 7206334 -243481520 - MER110 LTR ERV1 -14 477 167 483 250 70 0 chr2 7206417 7206573 -243481281 - MER110A LTR ERV1 -298 170 4 1410 169 51 42 chr2 7207013 7207414 -243480440 - MSTB2 LTR MaLR -2 455 1 225 0 0 0 chr2 7208131 7208156 -243479698 + (T)n Simple_repeat Simple_repeat 1 25 0 281 297 110 35 chr2 7209229 7209278 -243478576 - MIR SINE MIR -59 203 159 1436 231 136 62 chr2 7209278 7209735 -243478119 + MLT2B1 LTR ERVL 1 497 -23 216 0 0 0 chr2 7209735 7209759 -243478095 + (TG)n Simple_repeat Simple_repeat 2 25 0 1436 231 136 62 chr2 7209759 7209785 -243478069 + MLT2B1 LTR ERVL 497 520 0 281 297 110 35 chr2 7209785 7209880 -243477974 - MIR SINE MIR -103 159 48 207 0 0 0 chr2 7210990 7211013 -243476841 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 207 100 0 0 chr2 7211631 7211661 -243476193 + (A)n Simple_repeat Simple_repeat 1 30 0 349 259 123 24 chr2 7211729 7211899 -243475955 + L1ME LINE L1 5416 5602 -562 2276 78 0 0 chr2 7211932 7212247 -243475607 - AluY SINE Alu 0 315 1 275 239 245 15 chr2 7212294 7212651 -243475203 - MLT1J2 LTR MaLR -4 442 1 3347 104 57 62 chr2 7212863 7213393 -243474461 - MER1A DNA MER1_type 0 527 1 1028 126 0 48 chr2 7213628 7213795 -243474059 - L1PA11 LINE L1 -1 6173 6015 3051 54 3 0 chr2 7213796 7214169 -243473685 + L1PA10 LINE L1 5484 5857 -311 717 251 39 11 chr2 7214320 7214499 -243473355 - MER5A DNA MER1_type -2 187 4 1041 229 4 25 chr2 7214547 7214792 -243473062 - MER63B DNA MER1_type -196 240 1 296 130 74 0 chr2 7215411 7215465 -243472389 + MIR SINE MIR 118 175 -87 355 263 95 37 chr2 7216484 7216674 -243471180 - MIR SINE MIR -42 220 20 792 249 9 33 chr2 7216978 7217191 -243470663 + L1ME1 LINE L1 5954 6161 -5 445 304 73 22 chr2 7217272 7217588 -243470266 - LTR33 LTR ERVL 0 521 190 275 309 120 6 chr2 7217797 7217972 -243469882 - LTR33 LTR ERVL -324 197 3 789 346 26 17 chr2 7218352 7218696 -243469158 + L2 LINE L2 2457 2803 -511 744 178 0 22 chr2 7218697 7218832 -243469022 - FLAM_A SINE Alu -5 137 6 615 236 27 0 chr2 7218893 7219071 -243468783 + L2 LINE L2 2828 3022 -291 348 24 0 0 chr2 7219298 7219339 -243468515 + (TG)n Simple_repeat Simple_repeat 2 42 0 796 189 18 6 chr2 7221776 7221940 -243465914 - LTR64 LTR ERVK -392 166 1 427 312 83 46 chr2 7223038 7223493 -243464361 - L1M4 LINE L1 -2875 3271 2800 823 232 32 48 chr2 7223618 7223868 -243463986 - MLT1E1 LTR MaLR -2 652 407 929 231 46 42 chr2 7223922 7224182 -243463672 - MLT1E1 LTR MaLR -389 265 5 350 223 36 45 chr2 7225511 7225844 -243462010 + L1MDa LINE L1 1125 1484 -5108 491 270 83 78 chr2 7225852 7226200 -243461654 + L1MDa LINE L1 1521 1922 -4777 2634 36 7 0 chr2 7226200 7226501 -243461353 + AluY SINE Alu 1 303 -8 491 270 83 78 chr2 7226501 7226721 -243461133 + L1MDa LINE L1 1922 2139 -4560 1856 270 116 41 chr2 7226754 7227085 -243460769 + L1M4 LINE L1 3587 3892 -2254 954 92 13 7 chr2 7227085 7227238 -243460616 + (GAAA)n Simple_repeat Simple_repeat 4 157 0 1856 270 116 41 chr2 7227238 7228404 -243459450 + L1M4 LINE L1 3892 5195 -951 374 328 47 0 chr2 7229456 7229625 -243458229 + MIR SINE MIR 25 200 -62 765 226 140 82 chr2 7229923 7230360 -243457494 + LTR37B LTR ERV1 7 468 0 2629 52 0 0 chr2 7230536 7230841 -243457013 - AluY SINE Alu -6 305 1 413 291 127 0 chr2 7232341 7232506 -243455348 + MIR SINE MIR 67 252 -10 298 285 176 57 chr2 7234165 7234267 -243453587 - L2 LINE L2 -73 3240 3152 2160 110 0 10 chr2 7234267 7234566 -243453288 + AluSg SINE Alu 9 304 -6 298 285 176 57 chr2 7234566 7234832 -243453022 - L2 LINE L2 -161 3152 2828 1045 293 140 55 chr2 7234966 7235346 -243452508 - L2 LINE L2 -710 2604 2258 1203 149 23 28 chr2 7235346 7235560 -243452294 + L1MC1 LINE L1 6121 6333 0 1045 293 140 55 chr2 7235560 7235930 -243451924 - L2 LINE L2 -1056 2258 1790 309 289 114 0 chr2 7236102 7236216 -243451638 - L2 LINE L2 -723 2591 2465 223 291 0 0 chr2 7236217 7236272 -243451582 - L2 LINE L2 -1529 1785 1731 1415 153 0 0 chr2 7236277 7236499 -243451355 + AluJo SINE Alu 91 312 0 290 274 189 11 chr2 7236508 7236683 -243451171 - L2 LINE L2 -1638 1676 1471 234 219 0 0 chr2 7236729 7236793 -243451061 + (TGGA)n Simple_repeat Simple_repeat 3 66 0 230 335 134 12 chr2 7237516 7237680 -243450174 + MIR SINE MIR 54 237 -25 1677 87 55 0 chr2 7237681 7237899 -243449955 - MER30 DNA MER1_type 0 230 1 420 274 126 49 chr2 7238334 7238659 -243449195 + LTR52 LTR ERVL 2 351 -70 180 0 0 0 chr2 7238771 7238791 -243449063 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 193 365 56 9 chr2 7239031 7239138 -243448716 + L2 LINE L2 3167 3278 -35 198 71 0 0 chr2 7239212 7239240 -243448614 + (TG)n Simple_repeat Simple_repeat 1 28 0 261 0 0 0 chr2 7239294 7239323 -243448531 + (CA)n Simple_repeat Simple_repeat 2 30 0 326 286 0 0 chr2 7239489 7239566 -243448288 + MIR SINE MIR 71 147 -115 496 327 112 11 chr2 7239856 7240125 -243447729 + MLT2F LTR ERVL 269 564 -99 597 276 164 15 chr2 7240684 7241014 -243446840 + MLT2F LTR ERVL 24 402 -261 261 0 0 0 chr2 7242056 7242085 -243445769 + (TG)n Simple_repeat Simple_repeat 2 30 0 692 276 107 31 chr2 7242537 7242846 -243445008 + MLT1C LTR MaLR 3 344 -123 263 293 0 27 chr2 7242846 7242921 -243444933 - L2 LINE L2 -36 3277 3205 207 0 0 0 chr2 7243026 7243049 -243444805 + (TA)n Simple_repeat Simple_repeat 1 23 0 3773 49 0 7 chr2 7244071 7244522 -243443332 - LTR7 LTR ERV1 -2 448 1 2676 75 45 0 chr2 7244522 7244897 -243442957 - HERVH LTR ERV1 0 7713 7322 1337 142 18 9 chr2 7244895 7245113 -243442741 - HERVH LTR ERV1 -1894 5819 5600 * 4134 142 31 2 chr2 7245114 7245757 -243442097 - HERVH LTR ERV1 -2564 5149 4488 3136 125 37 6 chr2 7245759 7246246 -243441608 - HERVH LTR ERV1 -3720 3993 3492 977 120 7 0 chr2 7246236 7246386 -243441468 - HERVH LTR ERV1 -4423 3290 3140 * 16955 101 20 19 chr2 7246380 7248926 -243438928 - HERVH LTR ERV1 -4726 2987 437 991 85 42 78 chr2 7248927 7249182 -243438672 - HERVH LTR ERV1 -7093 620 437 4478 89 5 6 chr2 7249183 7249804 -243438050 - HERVH LTR ERV1 -7093 620 1 3663 55 4 11 chr2 7249806 7250257 -243437597 - LTR7 LTR ERV1 -2 448 1 493 296 90 48 chr2 7250400 7250824 -243437030 + LTR16A LTR ERVL 1 442 -8 267 307 59 52 chr2 7251022 7251175 -243436679 + L2 LINE L2 3160 3313 0 231 253 69 35 chr2 7251955 7252042 -243435812 + MER5A DNA MER1_type 97 186 -3 266 248 90 60 chr2 7253776 7253909 -243433945 + L2 LINE L2 3136 3272 0 213 330 98 0 chr2 7254350 7254462 -243433392 + L3b LINE CR1 1121 1243 -340 506 280 78 56 chr2 7254467 7254570 -243433284 - MIR SINE MIR 0 262 163 1704 197 7 102 chr2 7254570 7255001 -243432853 + MLT1B LTR MaLR 1 390 0 506 280 78 56 chr2 7255001 7255129 -243432725 - MIR SINE MIR -99 163 26 2084 143 74 34 chr2 7255184 7255534 -243432320 + THE1B LTR MaLR 1 364 0 294 235 78 86 chr2 7256132 7256375 -243431479 - L1MC4 LINE L1 -878 7164 6924 468 293 8 0 chr2 7256407 7256540 -243431314 - MER58A DNA MER1_type -44 180 47 423 0 0 0 chr2 7257125 7257172 -243430682 + (TG)n Simple_repeat Simple_repeat 2 48 0 371 356 58 5 chr2 7257246 7257437 -243430417 + MIR SINE MIR 21 221 -41 194 289 44 104 chr2 7257561 7257696 -243430158 - MIR SINE MIR -113 149 23 226 261 171 0 chr2 7258277 7258365 -243429489 + L2 LINE L2 3169 3271 -1 488 43 159 0 chr2 7259779 7259848 -243428006 - MADE1 DNA Mariner 0 80 1 536 220 184 54 chr2 7260043 7260355 -243427499 - MLT1J2 LTR MaLR -10 440 44 377 290 48 0 chr2 7261531 7261655 -243426199 + MER94 DNA DNA 5 134 0 22 0 0 0 chr2 7262055 7262077 -243425777 + AT_rich Low_complexity Low_complexity 1 22 0 233 268 87 22 chr2 7262105 7262288 -243425566 - L1M4 LINE L1 -1006 5140 4946 337 315 124 19 chr2 7262368 7262635 -243425219 - L1M4 LINE L1 -1323 4823 4529 1223 277 36 6 chr2 7262637 7262969 -243424885 + L1M4 LINE L1 1 342 -6200 298 175 186 21 chr2 7262961 7263058 -243424796 + L1M4 LINE L1 1745 1857 -4789 * 483 298 71 60 chr2 7263412 7263975 -243423879 - L1M4 LINE L1 -1922 4224 3656 281 214 0 11 chr2 7264150 7264239 -243423615 + (TA)n Simple_repeat Simple_repeat 1 88 0 389 304 56 60 chr2 7264638 7264673 -243423181 - L1MEd LINE L1 -4949 1170 1136 1955 153 0 10 chr2 7264673 7264980 -243422874 - AluSx SINE Alu -8 304 1 389 304 56 60 chr2 7264980 7265210 -243422644 - L1MEd LINE L1 -4983 1136 906 204 273 0 0 chr2 7265251 7265295 -243422559 + (TA)n Simple_repeat Simple_repeat 2 45 0 3560 139 59 13 chr2 7265295 7265571 -243422283 + MER39B LTR ERV1 3 265 -388 2067 134 80 14 chr2 7265571 7265922 -243421932 + THE1C LTR MaLR 1 374 -1 3560 139 59 13 chr2 7265922 7266240 -243421614 + MER39B LTR ERV1 265 624 -29 2178 73 6 94 chr2 7268153 7268481 -243419373 + AluSx SINE Alu 1 299 -13 187 367 46 0 chr2 7268578 7268687 -243419167 - MIR SINE MIR -32 230 117 468 212 22 4 chr2 7269248 7269484 -243418370 + GA-rich Low_complexity Low_complexity 1 240 0 1851 161 33 3 chr2 7270088 7270213 -243417641 + AluSx SINE Alu 2 122 -190 212 0 36 0 chr2 7270213 7270241 -243417613 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1851 161 33 3 chr2 7270241 7270414 -243417440 + AluSx SINE Alu 122 309 -3 220 213 43 0 chr2 7271350 7271397 -243416457 - MIR SINE MIR -132 130 82 191 283 22 0 chr2 7271882 7271928 -243415926 - MIR3 SINE MIR -16 192 146 1605 248 102 40 chr2 7272340 7273526 -243414328 + L1ME3A LINE L1 4884 6166 -4 204 40 0 0 chr2 7276179 7276204 -243411650 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 250 245 60 73 chr2 7277167 7277332 -243410522 - MIR3 SINE MIR -11 197 36 288 0 0 0 chr2 7277848 7277880 -243409974 + (T)n Simple_repeat Simple_repeat 1 32 0 470 364 65 14 chr2 7277973 7278190 -243409664 - MIR SINE MIR -15 247 20 352 376 129 0 chr2 7279027 7279237 -243408617 + L2 LINE L2 2488 2724 -590 876 305 57 55 chr2 7279406 7280059 -243407795 + L1MC4a LINE L1 5254 5907 -1901 292 149 15 15 chr2 7280067 7280134 -243407720 + (TA)n Simple_repeat Simple_repeat 2 68 0 306 132 0 0 chr2 7280286 7280339 -243407515 + (TG)n Simple_repeat Simple_repeat 2 54 0 264 326 76 5 chr2 7280350 7280534 -243407320 - L2 LINE L2 -1506 1808 1612 2290 116 129 13 chr2 7280816 7281195 -243406659 - MSTA LTR MaLR -5 423 1 260 239 0 0 chr2 7281283 7281350 -243406504 - HERV16 LTR ERVL -83 4913 4847 360 192 27 0 chr2 7281769 7281842 -243406012 - LTR16B LTR ERVL -389 75 1 4840 221 32 7 chr2 7281985 7282999 -243404855 + MER45B DNA AcHobo 1 1040 0 1967 194 22 8 chr2 7283548 7283908 -243403946 - MLT1A1 LTR MaLR 0 365 1 2317 73 0 0 chr2 7284425 7284765 -243403089 + AluY SINE Alu 1 311 0 2214 139 0 0 chr2 7286277 7286587 -243401267 - AluSx SINE Alu -2 310 1 197 206 48 48 chr2 7286978 7287041 -243400813 + L2 LINE L2 3158 3220 -93 277 301 48 19 chr2 7287141 7287244 -243400610 + L2 LINE L2 3155 3260 -12 609 330 33 0 chr2 7288217 7288432 -243399422 + MIR SINE MIR 20 241 -21 181 337 42 60 chr2 7288511 7288677 -243399177 + MIR3 SINE MIR 37 199 -9 215 59 0 29 chr2 7288994 7289028 -243398826 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 1912 208 45 75 chr2 7289088 7289645 -243398209 - MLT1F LTR MaLR -2 540 1 290 269 41 69 chr2 7289723 7289868 -243397986 - L2 LINE L2 -853 2461 2321 1379 316 80 47 chr2 7290126 7290610 -243397244 + L2 LINE L2 2209 2676 -637 2216 90 37 7 chr2 7290610 7290910 -243396944 - AluSg SINE Alu -1 309 1 1379 316 80 47 chr2 7290910 7291488 -243396366 + L2 LINE L2 2676 3313 0 245 252 25 109 chr2 7291825 7291944 -243395910 + L2 LINE L2 3190 3298 -15 319 295 38 0 chr2 7292104 7292209 -243395645 + L1P LINE L1 3656 3764 -2382 203 243 0 0 chr2 7292210 7292247 -243395607 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 236 34 22 chr2 7292254 7292343 -243395511 + L1MC4 LINE L1 6616 6705 -1337 * 237 165 94 47 chr2 7292322 7292407 -243395447 - L1MC4 LINE L1 -1340 6702 6614 380 184 23 0 chr2 7292411 7292498 -243395356 + (CATATA)n Simple_repeat Simple_repeat 6 94 0 761 244 27 44 chr2 7292584 7292872 -243394982 + L1M4 LINE L1 4079 4360 -1786 2878 215 108 82 chr2 7293112 7293623 -243394231 + L1MC3 LINE L1 6593 7089 -696 381 243 0 0 chr2 7293623 7293697 -243394157 + MLT1F1 LTR MaLR 50 123 -444 2878 215 108 82 chr2 7293697 7294260 -243393594 + L1MC3 LINE L1 7089 7770 -15 2035 198 8 6 chr2 7294305 7294669 -243393185 - MLT1A1 LTR MaLR 0 365 1 431 322 63 51 chr2 7294682 7295317 -243392537 + L1MB3 LINE L1 3512 4154 -1992 685 207 95 12 chr2 7295345 7295514 -243392340 + MER5A DNA MER1_type 1 183 -6 361 252 92 30 chr2 7295520 7295651 -243392203 + LTR16A1 LTR ERVL 1 139 -318 843 184 13 0 chr2 7295689 7295841 -243392013 + MER2 DNA MER2_type 17 170 -175 * 965 211 48 55 chr2 7295839 7296128 -243391726 + LTR16A1 LTR ERVL 171 457 0 500 295 49 11 chr2 7296218 7296401 -243391453 - MIR SINE MIR -1 261 72 23 68 0 0 chr2 7296477 7296521 -243391333 + AT_rich Low_complexity Low_complexity 1 44 0 344 279 38 100 chr2 7296894 7297234 -243390620 + MLT1I LTR MaLR 91 409 0 996 234 114 32 chr2 7297361 7297677 -243390177 + MER2 DNA MER2_type 2 343 -2 335 291 57 60 chr2 7297690 7297890 -243389964 + L1MB3 LINE L1 5039 5239 -907 216 111 0 0 chr2 7297890 7297926 -243389928 + (CA)n Simple_repeat Simple_repeat 1 36 0 335 291 57 60 chr2 7297926 7298058 -243389796 + L1MB3 LINE L1 5239 5370 -776 557 282 87 17 chr2 7298228 7298523 -243389331 + L1ME4a LINE L1 5613 5883 -238 428 295 77 22 chr2 7299507 7299690 -243388164 - MIR SINE MIR -58 204 12 186 43 0 0 chr2 7299915 7299938 -243387916 + (TG)n Simple_repeat Simple_repeat 1 23 0 1982 104 33 0 chr2 7300201 7300496 -243387358 + AluSg SINE Alu 1 304 0 239 256 35 47 chr2 7302987 7303073 -243384781 + MIR SINE MIR 137 221 -41 2629 132 5 3 chr2 7303170 7303542 -243384312 + THE1C LTR MaLR 1 373 -2 3500 171 53 0 chr2 7303645 7304271 -243383583 + L1MB3 LINE L1 5523 6181 -2 294 293 0 12 chr2 7305122 7305204 -243382650 + MIR SINE MIR 2 82 -180 2868 152 26 4 chr2 7306387 7306842 -243381012 - L1PA15 LINE L1 0 6165 5701 23 0 0 0 chr2 7308508 7308531 -243379323 + AT_rich Low_complexity Low_complexity 1 23 0 1230 89 157 0 chr2 7309162 7309313 -243378541 + MLT2A1 LTR ERVL 224 412 -32 806 30 10 0 chr2 7309313 7309414 -243378440 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 1230 89 157 0 chr2 7309414 7309453 -243378401 + MLT2A1 LTR ERVL 412 444 0 279 0 0 0 chr2 7309925 7309956 -243377898 + (CAT)n Simple_repeat Simple_repeat 3 33 0 813 290 97 37 chr2 7309989 7310444 -243377410 - MLT1L LTR MaLR -46 569 88 475 204 350 19 chr2 7310888 7311001 -243376853 - MER63A DNA MER1_type -1479 209 135 396 0 0 0 chr2 7311001 7311045 -243376809 + (CA)n Simple_repeat Simple_repeat 2 45 0 475 204 350 19 chr2 7311045 7311088 -243376766 - MER63A DNA MER1_type -1553 135 1 217 368 135 11 chr2 7311281 7311466 -243376388 - L2 LINE L2 -235 3037 2830 1583 212 41 13 chr2 7311622 7312155 -243375699 + MER92B LTR ERV1 15 636 0 368 123 0 15 chr2 7312948 7313013 -243374841 + (TTCC)n Simple_repeat Simple_repeat 3 66 0 412 142 115 108 chr2 7313344 7313492 -243374362 + MER53 DNA DNA 1 149 -40 267 31 0 0 chr2 7313848 7313880 -243373974 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 180 152 0 0 chr2 7316074 7316107 -243371747 + GA-rich Low_complexity Low_complexity 1 33 0 513 323 90 32 chr2 7317082 7317426 -243370428 - L2 LINE L2 -44 3269 2906 257 314 48 40 chr2 7320290 7320414 -243367440 + MIR SINE MIR 20 144 -118 250 339 46 26 chr2 7320970 7321165 -243366689 - L2 LINE L2 -653 2661 2463 901 231 74 0 chr2 7322972 7323214 -243364640 + MIR SINE MIR 1 260 -2 215 266 38 13 chr2 7325819 7325898 -243361956 + MIR SINE MIR 111 191 -71 537 164 116 156 chr2 7327390 7327564 -243360290 + MER20 DNA MER1_type 1 166 -53 285 98 0 0 chr2 7327564 7327605 -243360249 + (CA)n Simple_repeat Simple_repeat 1 41 0 537 164 116 156 chr2 7327605 7327655 -243360199 + MER20 DNA MER1_type 166 216 -3 282 358 5 27 chr2 7327668 7327855 -243359999 + MIR SINE MIR 46 228 -34 203 241 37 0 chr2 7327852 7327906 -243359948 + L2 LINE L2 3211 3266 -6 * 449 205 49 25 chr2 7328685 7328807 -243359047 + L1ME4a LINE L1 5997 6121 0 284 289 31 21 chr2 7329254 7329351 -243358503 + MIR SINE MIR 44 141 -67 2208 114 0 22 chr2 7331862 7332179 -243355675 + AluSg SINE Alu 1 310 0 199 380 53 9 chr2 7333075 7333188 -243354666 + MIR SINE MIR 36 153 -109 21 0 0 0 chr2 7334315 7334336 -243353518 + AT_rich Low_complexity Low_complexity 1 21 0 2201 135 112 0 chr2 7334934 7335319 -243352535 - MSTA LTR MaLR 0 428 1 213 302 0 0 chr2 7335439 7335492 -243352362 - MIR SINE MIR -163 99 47 218 220 9 147 chr2 7336824 7336884 -243350970 + MER5A DNA MER1_type 16 56 -133 2134 133 0 0 chr2 7336884 7337192 -243350662 + AluSx SINE Alu 3 310 -2 218 220 9 147 chr2 7337192 7337240 -243350614 + MER5A DNA MER1_type 56 109 -80 619 185 106 7 chr2 7337247 7337398 -243350456 - MER5B DNA MER1_type -12 166 1 327 265 68 0 chr2 7337552 7337684 -243350170 + MIR SINE MIR 60 200 -62 1594 158 105 31 chr2 7339044 7339367 -243348487 + MER7A DNA MER2_type 2 346 0 501 271 52 35 chr2 7339828 7340057 -243347797 - LTR67 LTR ERVL 0 557 325 280 379 26 13 chr2 7340653 7340806 -243347048 - MIR3 SINE MIR -38 170 16 748 212 67 56 chr2 7342722 7343049 -243344805 - LTR37B LTR ERV1 -7 461 91 22 0 0 0 chr2 7343639 7343661 -243344193 + AT_rich Low_complexity Low_complexity 1 22 0 1893 110 77 44 chr2 7343711 7344074 -243343780 + THE1C LTR MaLR 1 375 0 261 83 0 0 chr2 7345806 7345842 -243342012 + (CA)n Simple_repeat Simple_repeat 1 36 0 198 340 21 11 chr2 7346811 7346905 -243340949 + MIR SINE MIR 60 154 -108 1104 238 79 0 chr2 7348575 7348840 -243339014 - MER58B DNA MER1_type 0 341 56 232 213 13 27 chr2 7349003 7349078 -243338776 + (TGAA)n Simple_repeat Simple_repeat 1 74 0 208 341 145 15 chr2 7350578 7350776 -243337078 + MIR3 SINE MIR 21 241 -21 1201 118 82 282 chr2 7350776 7351311 -243336543 - MSTA LTR MaLR 0 428 1 4172 146 50 21 chr2 7351499 7352262 -243335592 + LTR1 LTR ERV1 1 785 0 247 361 62 0 chr2 7352964 7353094 -243334760 - MIR SINE MIR -105 157 20 3528 176 30 11 chr2 7353095 7353849 -243334005 + L1MA9 LINE L1 4242 5010 -1136 5163 190 18 9 chr2 7354089 7354863 -243332991 + L1MA9 LINE L1 5002 5768 -544 222 37 0 0 chr2 7354863 7354890 -243332964 + (CA)n Simple_repeat Simple_repeat 2 28 0 5163 190 18 9 chr2 7354890 7355153 -243332701 + L1MA9 LINE L1 5768 6027 -285 1480 196 28 39 chr2 7355153 7355489 -243332365 + AluJo SINE Alu 1 333 0 5163 190 18 9 chr2 7355489 7355749 -243332105 + L1MA9 LINE L1 6027 6311 -1 204 325 165 21 chr2 7356345 7356733 -243331121 + L2 LINE L2 2454 2897 -417 254 265 29 0 chr2 7356733 7356801 -243331053 + CT-rich Low_complexity Low_complexity 2 71 0 190 357 56 32 chr2 7356832 7357081 -243330773 + L2 LINE L2 2945 3199 -73 315 294 43 37 chr2 7357271 7357434 -243330420 + MIR SINE MIR 35 198 -64 1673 190 73 38 chr2 7357784 7358163 -243329691 - MLT1C LTR MaLR 0 467 72 1320 219 76 28 chr2 7358163 7358520 -243329334 + MLT1A2 LTR MaLR 1 374 0 1673 190 73 38 chr2 7358520 7358535 -243329319 - MLT1C LTR MaLR -395 72 59 3575 70 4 7 chr2 7358542 7358996 -243328858 + MLT2A2 LTR ERVL 1 453 0 192 296 0 0 chr2 7360061 7360115 -243327739 - L2 LINE L2 0 3272 3219 365 265 11 99 chr2 7360182 7360363 -243327491 + MIR SINE MIR 62 226 -36 290 68 0 23 chr2 7360466 7360510 -243327344 - MADE1 DNA Mariner -37 43 1 198 0 0 0 chr2 7361014 7361036 -243326818 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 232 326 32 0 chr2 7361772 7361867 -243325987 + MIR SINE MIR 43 140 -68 221 281 37 49 chr2 7363984 7364066 -243323788 - L2 LINE L2 0 3272 3192 505 299 23 37 chr2 7364733 7364976 -243322878 + MIR SINE MIR 18 253 -9 1214 254 100 33 chr2 7365231 7365697 -243322157 - MER21B LTR ERV1 -97 834 294 374 212 0 0 chr2 7365770 7365836 -243322018 - MER21B LTR ERV1 -785 78 13 277 284 110 19 chr2 7368119 7368274 -243319580 - MLT1L LTR MaLR -10 605 437 457 286 58 15 chr2 7368649 7368862 -243318992 - MIR SINE MIR -22 240 18 219 333 108 8 chr2 7369052 7369172 -243318682 - MIR3 SINE MIR -21 187 56 2506 57 3 0 chr2 7369229 7369527 -243318327 + AluY SINE Alu 1 299 -12 235 301 115 9 chr2 7369802 7369915 -243317939 + MIR SINE MIR 88 212 -50 270 316 54 65 chr2 7370623 7370791 -243317063 + MIR3 SINE MIR 16 181 -27 1169 42 0 0 chr2 7370792 7370934 -243316920 + L1PA5 LINE L1 6013 6154 0 318 282 0 0 chr2 7371553 7371695 -243316159 + (CA)n Simple_repeat Simple_repeat 2 143 0 413 282 30 39 chr2 7372557 7372716 -243315138 - MIR SINE MIR -63 145 23 1426 212 43 54 chr2 7373051 7373219 -243314635 + MLT1A2 LTR MaLR 1 169 -205 2037 125 7 0 chr2 7373219 7373523 -243314331 + AluSq SINE Alu 1 306 -7 1426 212 43 54 chr2 7373523 7373726 -243314128 + MLT1A2 LTR MaLR 169 368 -6 275 247 26 39 chr2 7373860 7373937 -243313917 - MER58B DNA MER1_type 0 341 266 255 314 120 31 chr2 7374573 7374764 -243313090 - MIR SINE MIR -6 256 49 213 132 0 0 chr2 7375338 7375376 -243312478 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 300 273 7 chr2 7376257 7376407 -243311447 - MIR SINE MIR -41 221 32 1309 166 12 104 chr2 7376513 7376695 -243311159 - AluJo SINE Alu -2 310 113 243 0 0 0 chr2 7376695 7376722 -243311132 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2692 16 0 0 chr2 7376724 7377030 -243310824 - AluYb8 SINE Alu -12 306 1 1309 166 12 104 chr2 7377030 7377181 -243310673 - AluJo SINE Alu -200 112 5 37 62 0 0 chr2 7377530 7377595 -243310259 + AT_rich Low_complexity Low_complexity 1 65 0 320 230 0 10 chr2 7377896 7377996 -243309858 + CT-rich Low_complexity Low_complexity 2 100 0 1495 217 40 40 chr2 7378249 7378623 -243309231 + MLT1A2 LTR MaLR 1 374 0 696 342 44 44 chr2 7378689 7379125 -243308729 + L2 LINE L2 2836 3271 -1 759 244 72 29 chr2 7379156 7379687 -243308167 - MLT1E1 LTR MaLR -2 652 1 334 353 30 18 chr2 7379772 7379939 -243307915 + MIR SINE MIR 65 233 -29 183 42 0 0 chr2 7380138 7380162 -243307692 + (A)n Simple_repeat Simple_repeat 1 24 0 1052 248 9 0 chr2 7381536 7381758 -243306096 - MLT1A1 LTR MaLR 0 365 142 1230 203 130 20 chr2 7382561 7382906 -243304948 - MLT1B LTR MaLR -4 386 4 333 321 125 22 chr2 7383523 7383747 -243304107 + LTR16A LTR ERVL 115 361 -89 952 330 54 39 chr2 7384635 7385207 -243302647 + HERV16 LTR ERVL 991 1571 -3425 1028 291 44 47 chr2 7385396 7386245 -243301609 + L1M4 LINE L1 2131 2976 -3170 1171 89 0 56 chr2 7386280 7386438 -243301416 - L1PB1 LINE L1 -207 5944 5796 207 0 0 0 chr2 7386438 7386461 -243301393 + (CA)n Simple_repeat Simple_repeat 2 24 0 1171 89 0 56 chr2 7386461 7386481 -243301373 - L1PB1 LINE L1 -355 5796 5776 393 107 47 33 chr2 7386494 7386644 -243301210 + (TA)n Simple_repeat Simple_repeat 1 152 0 253 57 23 68 chr2 7386679 7386767 -243301087 + (TA)n Simple_repeat Simple_repeat 2 85 0 2047 88 35 0 chr2 7386771 7387056 -243300798 - L1PB1 LINE L1 -360 5791 5497 380 349 50 43 chr2 7387129 7387387 -243300467 + L2 LINE L2 3005 3264 -8 412 274 11 86 chr2 7388009 7388184 -243299670 - MIR3 SINE MIR -27 181 20 204 40 0 0 chr2 7388762 7388787 -243299067 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 278 358 50 11 chr2 7389853 7390032 -243297822 + MIR3 SINE MIR 14 199 -9 510 203 0 0 chr2 7390917 7391035 -243296819 + (TG)n Simple_repeat Simple_repeat 1 118 0 548 302 131 34 chr2 7392186 7392454 -243295400 - MER115 DNA AcHobo -398 295 2 228 182 0 0 chr2 7393844 7393888 -243293966 + MIR SINE MIR 84 127 -135 2266 114 76 15 chr2 7394330 7394673 -243293181 + THE1B LTR MaLR 1 364 0 258 95 0 0 chr2 7395094 7395136 -243292718 + (TG)n Simple_repeat Simple_repeat 2 43 0 235 316 68 34 chr2 7396203 7396380 -243291474 - MIR SINE MIR -77 185 3 466 257 56 78 chr2 7398643 7399111 -243288743 + MLT1F1 LTR MaLR 17 537 -5 231 317 39 65 chr2 7401125 7401299 -243286555 + MIR SINE MIR 5 171 -62 184 293 35 0 chr2 7401961 7402019 -243285835 - L2 LINE L2 -18 3254 3195 672 295 78 4 chr2 7402781 7403025 -243284829 - MLT1C LTR MaLR -2 465 204 1398 141 90 31 chr2 7403513 7403618 -243284236 + AluSp SINE Alu 10 107 -206 2145 88 3 26 chr2 7403618 7403923 -243283931 + AluY SINE Alu 1 298 -13 1398 141 90 31 chr2 7403923 7404073 -243283781 + AluSp SINE Alu 107 280 -33 22 0 0 0 chr2 7404093 7404115 -243283739 + AT_rich Low_complexity Low_complexity 1 22 0 410 318 218 45 chr2 7404425 7404938 -243282916 + L1MC4a LINE L1 5255 5856 -1952 557 365 44 6 chr2 7404963 7405284 -243282570 - MLT1J1 LTR MaLR -43 403 71 396 141 125 0 chr2 7405861 7405925 -243281929 - FRAM/FAM SINE Alu -95 71 1 509 225 73 22 chr2 7406389 7406533 -243281321 - MLT1J2 LTR MaLR -289 161 18 200 173 39 58 chr2 7406656 7406708 -243281146 + GA-rich Low_complexity Low_complexity 4 54 0 248 130 22 0 chr2 7407037 7407083 -243280771 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 2411 120 40 0 chr2 7408305 7408654 -243279200 - THE1B LTR MaLR -1 363 1 251 298 28 61 chr2 7408868 7409044 -243278810 + MIR SINE MIR 34 206 -2 33 56 0 0 chr2 7409053 7409107 -243278747 + AT_rich Low_complexity Low_complexity 1 54 0 248 270 50 20 chr2 7409229 7409329 -243278525 + MIR SINE MIR 18 120 -142 226 260 30 80 chr2 7409333 7409433 -243278421 + MIR SINE MIR 89 183 -79 239 294 198 23 chr2 7411809 7411986 -243275868 - L2 LINE L2 -4 3309 3102 3698 30 0 0 chr2 7412158 7412588 -243275266 - L1PA2 LINE L1 0 6155 5726 4184 11 0 0 chr2 7412588 7413089 -243274765 + L1PA2 LINE L1 5221 5721 -434 350 161 23 35 chr2 7413318 7413405 -243274449 + L1MEc LINE L1 2232 2317 -4079 360 282 15 8 chr2 7413476 7413607 -243274247 + L1MCc LINE L1 27 158 -6265 308 294 147 49 chr2 7413708 7413973 -243273881 + L1MCc LINE L1 298 588 -5835 403 195 25 93 chr2 7414099 7414217 -243273637 + L1MCc LINE L1 818 927 -5496 1477 231 46 3 chr2 7414917 7415246 -243272608 + MLT1A1 LTR MaLR 1 343 -22 250 184 41 0 chr2 7415246 7415295 -243272559 + MLT1A1 LTR MaLR 315 365 0 190 292 22 56 chr2 7415844 7415933 -243271921 + MIR3 SINE MIR 89 174 -34 1095 332 125 29 chr2 7415936 7417253 -243270601 + L2 LINE L2 1830 3272 0 335 326 88 21 chr2 7417294 7417487 -243270367 + MIR3 SINE MIR 2 207 -1 1047 166 42 0 chr2 7417919 7418112 -243269742 + MER3 DNA MER1_type 9 209 0 2202 160 35 38 chr2 7418711 7419257 -243268597 + MLT2A2 LTR ERVL 1 551 -3 414 0 0 0 chr2 7419257 7419303 -243268551 + (CA)n Simple_repeat Simple_repeat 2 47 0 249 159 0 0 chr2 7421475 7421519 -243266335 + (TA)n Simple_repeat Simple_repeat 1 44 0 204 135 0 0 chr2 7421518 7421555 -243266299 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 531 252 38 26 chr2 7421560 7421787 -243266067 - L1MD3 LINE L1 -1359 6683 6443 1121 123 0 0 chr2 7421868 7422030 -243265824 + MLT2B2 LTR ERVL 2 163 -352 2088 140 143 11 chr2 7422176 7422554 -243265300 + MSTA LTR MaLR 1 428 0 27 81 0 0 chr2 7422805 7422867 -243264987 + AT_rich Low_complexity Low_complexity 1 62 0 2936 194 22 2 chr2 7423339 7423849 -243264005 - MLT2B1 LTR ERVL 0 520 1 1574 243 102 49 chr2 7423945 7424533 -243263321 + L1MC4 LINE L1 6468 7086 -956 1106 280 98 22 chr2 7424664 7425071 -243262783 + L1MC4 LINE L1 7464 7901 -141 230 216 0 0 chr2 7425075 7425126 -243262728 + L1MC4 LINE L1 7990 8040 -2 2236 105 6 10 chr2 7427004 7427317 -243260537 + AluSx SINE Alu 1 312 0 4195 195 20 5 chr2 7427456 7429009 -243258845 - L1MA9 LINE L1 -14 6298 4536 287 220 0 0 chr2 7429021 7429080 -243258774 - L1MA9 LINE L1 -2494 3652 3594 1364 248 28 55 chr2 7429246 7429645 -243258209 - MLT1E LTR MaLR 0 593 206 216 111 0 0 chr2 7429674 7429710 -243258144 + (TG)n Simple_repeat Simple_repeat 2 37 0 239 213 0 0 chr2 7429710 7429757 -243258097 - MLT1E LTR MaLR -491 163 117 340 239 0 54 chr2 7430343 7430435 -243257419 + L2 LINE L2 3186 3272 0 235 291 0 0 chr2 7431101 7431156 -243256698 + CT-rich Low_complexity Low_complexity 2 56 0 382 296 113 31 chr2 7431222 7431381 -243256473 + MIR3 SINE MIR 5 176 -32 361 299 54 65 chr2 7432137 7432321 -243255533 - MIR SINE MIR -56 206 25 1569 233 55 17 chr2 7432767 7433187 -243254667 + MER63B DNA MER1_type 1 436 0 2224 273 137 30 chr2 7433934 7434931 -243252923 - HAL1 LINE L1 -7 2500 1397 197 267 0 0 chr2 7435040 7435085 -243252769 + MIR SINE MIR 107 151 -111 369 183 0 0 chr2 7435223 7435294 -243252560 - AluJ/FRAM SINE Alu 0 302 232 2410 308 67 25 chr2 7435314 7435936 -243251918 - HAL1 LINE L1 -1189 1318 724 2363 127 36 28 chr2 7435936 7436297 -243251557 - THE1B LTR MaLR 0 364 1 2410 308 67 25 chr2 7436297 7436937 -243250917 - HAL1 LINE L1 -1783 724 3 1648 200 7 0 chr2 7437189 7437499 -243250355 + AluJo SINE Alu 1 312 0 2219 104 0 20 chr2 7437558 7437857 -243249997 + AluSc SINE Alu 1 293 -16 216 0 0 0 chr2 7437951 7437975 -243249879 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 1252 188 31 100 chr2 7438437 7438593 -243249261 + MLT1B LTR MaLR 21 186 -204 1916 133 20 20 chr2 7438593 7438894 -243248960 + AluSg SINE Alu 1 301 -9 1252 188 31 100 chr2 7438894 7439126 -243248728 + MLT1B LTR MaLR 186 382 -8 549 278 80 6 chr2 7440137 7440313 -243247541 + Charlie1 DNA MER1_type 1 189 -2572 2203 93 33 0 chr2 7440375 7440676 -243247178 + AluY SINE Alu 1 311 0 249 98 0 157 chr2 7440676 7440727 -243247127 - U6 snRNA snRNA -1 106 64 473 278 15 0 chr2 7440727 7440860 -243246994 + Charlie1 DNA MER1_type 2626 2760 -1 21 36 0 0 chr2 7441406 7441434 -243246420 + AT_rich Low_complexity Low_complexity 1 28 0 1535 184 0 21 chr2 7441548 7441831 -243246023 - AluJo SINE Alu -33 279 3 21 0 0 0 chr2 7442182 7442203 -243245651 + AT_rich Low_complexity Low_complexity 1 21 0 305 216 53 88 chr2 7442405 7442576 -243245278 + L1ME4a LINE L1 5260 5424 -2384 311 288 194 0 chr2 7442792 7442931 -243244923 + MIR SINE MIR 84 249 -13 342 0 0 0 chr2 7442948 7442986 -243244868 + (TG)n Simple_repeat Simple_repeat 1 38 0 261 0 0 0 chr2 7442985 7443014 -243244840 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 1956 118 0 15 chr2 7443019 7443291 -243244563 - AluSx SINE Alu -44 268 1 228 67 0 0 chr2 7444707 7444737 -243243117 + (T)n Simple_repeat Simple_repeat 1 30 0 694 263 99 65 chr2 7445841 7446396 -243241458 + L1ME4a LINE L1 5524 6097 -24 2203 101 3 10 chr2 7446671 7446969 -243240885 + AluSx SINE Alu 1 296 -16 1741 169 3 3 chr2 7447293 7447583 -243240271 + AluJb SINE Alu 7 296 -16 2503 131 28 17 chr2 7448286 7448646 -243239208 - THE1B LTR MaLR 0 364 1 2576 47 3 31 chr2 7448761 7449079 -243238775 - AluY SINE Alu -2 309 1 626 266 7 26 chr2 7449212 7449366 -243238488 + MER45A DNA AcHobo 3 153 -25 1653 262 43 15 chr2 7450790 7451404 -243236450 - L1MD3 LINE L1 -10 7985 7258 256 50 75 0 chr2 7451411 7451451 -243236403 - L1MA2 LINE L1 0 6304 6262 314 105 88 0 chr2 7451453 7451510 -243236344 + L1MA2 LINE L1 6225 6286 -18 755 284 74 40 chr2 7451539 7451995 -243235859 - L1ME1 LINE L1 -264 5902 5407 364 298 34 58 chr2 7452698 7452906 -243234948 + MIR SINE MIR 59 261 -1 2099 66 7 42 chr2 7452938 7453224 -243234630 + AluSp SINE Alu 1 276 -37 321 339 54 0 chr2 7453410 7453540 -243234314 + L2 LINE L2 3133 3269 -3 199 269 19 0 chr2 7455386 7455438 -243232416 + L2 LINE L2 3242 3294 -19 235 349 42 12 chr2 7455475 7455641 -243232213 - MIR SINE MIR -4 258 88 297 0 0 0 chr2 7455682 7455715 -243232139 + (CA)n Simple_repeat Simple_repeat 2 34 0 2228 114 3 0 chr2 7455794 7456091 -243231763 - AluSx SINE Alu -14 298 1 182 312 101 43 chr2 7456330 7456468 -243231386 - L2 LINE L2 0 3272 3127 3755 160 13 61 chr2 7456601 7457016 -243230838 - L1MA10 LINE L1 -3 6331 5967 1846 177 0 16 chr2 7457016 7457333 -243230521 - AluJb SINE Alu 0 312 1 3755 160 13 61 chr2 7457333 7457673 -243230181 - L1MA10 LINE L1 -367 5967 5612 310 121 30 0 chr2 7458320 7458386 -243229468 + CT-rich Low_complexity Low_complexity 2 69 0 378 42 0 0 chr2 7458388 7458436 -243229418 + (CA)n Simple_repeat Simple_repeat 1 48 0 250 270 176 0 chr2 7461531 7461605 -243226249 + L2 LINE L2 3186 3272 0 254 296 12 0 chr2 7461605 7461686 -243226168 + (TGAA)n Simple_repeat Simple_repeat 2 83 0 624 328 129 13 chr2 7461749 7462353 -243225501 + L2 LINE L2 2141 2814 -500 285 284 119 34 chr2 7462425 7462601 -243225253 + L2 LINE L2 2890 3080 -192 514 106 0 32 chr2 7463272 7463288 -243224566 + (GAAA)n Simple_repeat Simple_repeat 2 17 -75 1132 189 242 4 chr2 7463288 7463532 -243224322 + AluJb SINE Alu 1 302 0 514 106 0 32 chr2 7463532 7463609 -243224245 + (GAAA)n Simple_repeat Simple_repeat 17 92 0 281 328 53 8 chr2 7463891 7464022 -243223832 - MIR3 SINE MIR -61 147 11 2212 105 0 16 chr2 7464204 7464508 -243223346 - AluSx SINE Alu -13 299 1 675 234 34 34 chr2 7464963 7465170 -243222684 + L1ME LINE L1 5516 5719 -402 227 57 29 0 chr2 7465430 7465465 -243222389 + L1ME4a LINE L1 6085 6120 -1 198 304 76 13 chr2 7466522 7466601 -243221253 - MER5A DNA MER1_type -51 138 55 1258 316 113 14 chr2 7466777 7467432 -243220422 + L3 LINE CR1 615 1334 -243 216 328 59 51 chr2 7467479 7467735 -243220119 + L2 LINE L2 2844 3101 -171 215 204 0 0 chr2 7467855 7467899 -243219955 + GA-rich Low_complexity Low_complexity 1 44 0 3816 185 36 30 chr2 7468633 7469476 -243218378 + L1MB7 LINE L1 5337 6184 0 298 336 22 52 chr2 7471356 7471490 -243216364 - L2 LINE L2 -4 3268 3139 362 271 114 43 chr2 7472002 7472283 -243215571 - L1M4 LINE L1 -1771 4375 4075 24 53 0 0 chr2 7472651 7472689 -243215165 + AT_rich Low_complexity Low_complexity 1 38 0 191 416 112 0 chr2 7472695 7472820 -243215034 + L2 LINE L2 3134 3272 0 2644 197 18 9 chr2 7475540 7476089 -243211765 + MER89 LTR ERV1 4 557 -2 245 297 27 0 chr2 7476971 7477045 -243210809 + CT-rich Low_complexity Low_complexity 1 76 0 502 277 15 8 chr2 7477439 7477569 -243210285 + MER94 DNA DNA 3 133 -1 4119 112 30 11 chr2 7478398 7479021 -243208833 + MER41B LTR ERV1 1 635 0 2978 215 88 110 chr2 7479959 7481213 -243206641 + MER69B DNA AcHobo 1 1226 0 687 251 52 11 chr2 7481827 7482018 -243205836 - MLT2B1 LTR ERVL -3 517 319 1796 202 17 17 chr2 7482036 7482397 -243205457 + MLT1A2 LTR MaLR 14 374 0 1283 212 7 15 chr2 7482467 7482736 -243205118 - MLT2B1 LTR ERVL -253 267 1 1640 209 33 22 chr2 7482970 7483338 -243204516 - MLT1A2 LTR MaLR 0 374 3 13669 139 36 46 chr2 7483551 7485859 -243201995 + Tigger1 DNA MER2_type 14 2297 -121 1910 115 70 0 chr2 7485859 7486129 -243201725 + AluSx SINE Alu 9 297 -15 13669 139 36 46 chr2 7486129 7486250 -243201604 + Tigger1 DNA MER2_type 2297 2418 0 196 284 75 0 chr2 7486658 7486725 -243201129 + MIR3 SINE MIR 114 185 -23 186 380 70 6 chr2 7488087 7488258 -243199596 - MIR SINE MIR -80 182 1 2065 92 4 0 chr2 7488540 7488801 -243199053 + AluSq SINE Alu 36 297 -16 194 62 31 0 chr2 7489026 7489058 -243198796 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 309 174 0 0 chr2 7490211 7490280 -243197574 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 208 298 83 24 chr2 7490299 7490383 -243197471 - MIR SINE MIR -70 192 104 333 322 65 37 chr2 7494455 7494669 -243193185 - MIR SINE MIR -11 251 32 2910 19 0 0 chr2 7495284 7495601 -243192253 - AluYb8 SINE Alu -1 317 1 530 223 30 81 chr2 7495650 7495786 -243192068 - MER112 DNA MER1_type -7 253 128 885 241 39 0 chr2 7495786 7495993 -243191861 + MER20 DNA MER1_type 4 218 -1 530 223 30 81 chr2 7495993 7496053 -243191801 - MER112 DNA MER1_type -132 128 67 228 35 0 0 chr2 7496173 7496202 -243191652 + (CA)n Simple_repeat Simple_repeat 2 30 0 249 213 0 80 chr2 7496538 7496613 -243191241 - MIR SINE MIR -78 184 116 303 244 24 0 chr2 7497836 7497918 -243189936 + L2 LINE L2 3133 3216 -56 209 195 0 0 chr2 7498004 7498045 -243189809 + L2 LINE L2 3265 3305 -8 229 169 28 84 chr2 7498098 7498169 -243189685 + L2 LINE L2 3201 3267 -5 32499 31 4 0 chr2 7498706 7503319 -243184535 + L1PA3 LINE L1 1527 6155 0 472 147 13 0 chr2 7503571 7503646 -243184208 - MER58 DNA MER1_type 0 2420 2345 259 175 18 53 chr2 7503674 7503731 -243184123 - MER58 DNA MER1_type -157 58 4 218 288 0 0 chr2 7504270 7504329 -243183525 + MIR SINE MIR 71 129 -133 21 0 0 0 chr2 7505151 7505172 -243182682 + AT_rich Low_complexity Low_complexity 1 21 0 183 271 35 35 chr2 7505177 7505262 -243182592 - MIR SINE MIR -102 160 76 294 29 0 0 chr2 7505462 7505497 -243182357 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr2 7506762 7506784 -243181070 + AT_rich Low_complexity Low_complexity 1 22 0 1673 167 27 27 chr2 7507487 7507787 -243180067 + AluJo SINE Alu 1 300 -12 380 301 92 10 chr2 7508111 7508307 -243179547 + MIR SINE MIR 13 224 -38 449 283 7 0 chr2 7508395 7508540 -243179314 - MER117 DNA MER1_type -47 150 5 410 286 8 0 chr2 7509402 7509521 -243178333 + MIR SINE MIR 114 233 -29 1403 137 24 9 chr2 7509892 7510319 -243177535 + LTR54 LTR ERV1 2 510 0 397 175 19 0 chr2 7510322 7510425 -243177429 + (CA)n Simple_repeat Simple_repeat 2 106 0 662 277 59 4 chr2 7510966 7511204 -243176650 + MIR SINE MIR 3 253 -9 1079 137 0 120 chr2 7511278 7511512 -243176342 + L1MB5 LINE L1 5963 6168 -6 185 196 20 0 chr2 7511515 7511566 -243176288 + GA-rich Low_complexity Low_complexity 1 52 0 214 279 0 15 chr2 7512141 7512209 -243175645 + A-rich Low_complexity Low_complexity 2 68 0 226 205 72 48 chr2 7513929 7514012 -243173842 - L3 LINE CR1 -1 1576 1492 182 332 45 65 chr2 7514526 7514725 -243173129 - L2 LINE L2 -18 3254 3060 2096 128 155 13 chr2 7516723 7517098 -243170756 - MSTA LTR MaLR 0 428 1 22 0 0 0 chr2 7517263 7517285 -243170569 + AT_rich Low_complexity Low_complexity 1 22 0 267 303 0 13 chr2 7518317 7518393 -243169461 - MIR SINE MIR -26 236 162 297 129 32 32 chr2 7518396 7518458 -243169396 - MLT2B1 LTR ERVL 0 520 459 232 271 12 24 chr2 7518458 7518543 -243169311 - L1MC4 LINE L1 -1345 6697 6614 491 270 6 0 chr2 7518544 7518718 -243169136 + (TA)n Simple_repeat Simple_repeat 1 175 0 342 0 0 0 chr2 7518749 7518787 -243169067 + (TG)n Simple_repeat Simple_repeat 2 39 0 233 196 39 0 chr2 7518788 7518839 -243169015 + MLT2B1 LTR ERVL 468 520 0 242 271 59 0 chr2 7519026 7519111 -243168743 - L1MC4 LINE L1 -1339 6703 6614 244 160 40 0 chr2 7519150 7519200 -243168654 + MLT2B1 LTR ERVL 464 515 -5 288 253 0 13 chr2 7519205 7519284 -243168570 + MIR SINE MIR 159 236 -26 2410 150 7 6 chr2 7519327 7519711 -243168143 - MLT2D LTR ERVL -40 480 1 366 327 32 6 chr2 7519711 7519867 -243167987 - MIR SINE MIR -99 163 4 186 236 0 0 chr2 7520161 7520216 -243167638 + (TG)n Simple_repeat Simple_repeat 1 55 0 361 347 40 6 chr2 7520385 7520561 -243167293 + MIR SINE MIR 47 228 -34 1913 147 10 10 chr2 7520698 7520990 -243166864 + AluSx SINE Alu 1 292 -20 251 340 65 50 chr2 7521823 7522410 -243165444 - L2 LINE L2 -25 3247 2654 2222 218 23 14 chr2 7522411 7522893 -243164961 + L1MB5 LINE L1 5663 6139 -41 2162 86 0 7 chr2 7522893 7523171 -243164683 + AluY SINE Alu 1 276 -35 270 0 0 0 chr2 7523176 7523206 -243164648 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2222 218 23 14 chr2 7523206 7523246 -243164608 + L1MB5 LINE L1 6142 6180 0 597 270 110 5 chr2 7523548 7523748 -243164106 - Charlie8 DNA MER1_type -2193 224 4 1163 263 71 30 chr2 7524237 7524728 -243163126 - LTR53 LTR ERVL -8 511 1 500 280 54 18 chr2 7525100 7525268 -243162586 - MIR SINE MIR -61 201 28 252 0 0 0 chr2 7525557 7525585 -243162269 + (TA)n Simple_repeat Simple_repeat 2 29 0 310 277 69 10 chr2 7526498 7526599 -243161255 + MIR SINE MIR 112 218 -44 2431 134 22 3 chr2 7526616 7526973 -243160881 + THE1B LTR MaLR 1 364 0 688 265 23 55 chr2 7527019 7527276 -243160578 - MIR SINE MIR 0 262 14 387 247 11 0 chr2 7527332 7527425 -243160429 - MIR SINE MIR -74 188 95 691 224 21 0 chr2 7527502 7527645 -243160209 + MIR SINE MIR 20 165 -97 186 43 0 0 chr2 7527678 7527701 -243160153 + (TAA)n Simple_repeat Simple_repeat 2 24 0 284 205 137 43 chr2 7527754 7527871 -243159983 + MER5A DNA MER1_type 9 136 -53 244 340 21 0 chr2 7528441 7528538 -243159316 - MER5A DNA MER1_type -5 184 86 2147 178 63 25 chr2 7528540 7528803 -243159051 - MLT1C LTR MaLR -1 466 178 348 24 0 0 chr2 7528803 7528844 -243159010 + (TG)n Simple_repeat Simple_repeat 2 42 0 2147 178 63 25 chr2 7528844 7529023 -243158831 - MLT1C LTR MaLR -289 178 7 191 59 0 59 chr2 7529392 7529426 -243158428 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 360 0 0 0 chr2 7532860 7532900 -243154954 + (CA)n Simple_repeat Simple_repeat 1 40 0 2443 53 0 16 chr2 7532929 7533232 -243154622 - AluY SINE Alu -13 298 1 21 0 0 0 chr2 7533290 7533311 -243154543 + AT_rich Low_complexity Low_complexity 1 21 0 1176 137 0 0 chr2 7534329 7534497 -243153357 - AluSg/x SINE Alu -8 304 137 2275 114 3 0 chr2 7534791 7535099 -243152755 - AluSp SINE Alu -4 309 1 425 87 159 0 chr2 7537098 7537167 -243150687 + MADE1 DNA Mariner 1 80 0 862 165 0 0 chr2 7537819 7537952 -243149902 + FLAM_C SINE Alu 6 138 -5 2208 106 3 3 chr2 7538579 7538881 -243148973 - AluSp SINE Alu -11 302 1 350 274 21 17 chr2 7539368 7539567 -243148287 - L1ME4a LINE L1 -188 5933 5698 376 369 122 4 chr2 7539695 7539950 -243147904 - L3 LINE CR1 -864 713 429 206 62 31 0 chr2 7540102 7540134 -243147720 + (GAAAA)n Simple_repeat Simple_repeat 1 33 0 207 265 0 29 chr2 7540987 7541055 -243146799 - MIR SINE MIR 0 262 197 2067 132 35 6 chr2 7541059 7541370 -243146484 - MER2 DNA MER2_type -5 340 21 644 265 24 12 chr2 7541379 7541545 -243146309 - MIR SINE MIR -88 174 7 196 260 73 52 chr2 7541621 7541717 -243146137 - MIR SINE MIR -163 99 2 245 302 137 40 chr2 7542838 7542903 -243144951 - MIR SINE MIR 0 262 205 321 26 0 0 chr2 7542903 7542941 -243144913 + (TG)n Simple_repeat Simple_repeat 2 39 0 245 302 137 40 chr2 7542941 7543082 -243144772 - MIR SINE MIR -57 205 39 229 326 102 17 chr2 7544887 7545023 -243142831 + MIR3 SINE MIR 35 189 -19 364 322 66 61 chr2 7545220 7545677 -243142177 + L1M4 LINE L1 4818 5276 -870 6939 208 69 44 chr2 7545701 7547638 -243140216 + L1MDa LINE L1 311 2295 -4245 302 212 0 212 chr2 7547674 7547810 -243140044 + L1MDa LINE L1 2956 3029 -3511 2529 83 0 0 chr2 7547810 7548123 -243139731 - AluSq SINE Alu 0 313 1 302 212 0 212 chr2 7548123 7548208 -243139646 + L1MDa LINE L1 3029 3130 -3410 265 107 18 36 chr2 7548210 7548266 -243139588 + (GAAA)n Simple_repeat Simple_repeat 3 57 0 1808 289 47 7 chr2 7548279 7548996 -243138858 + L1MDa LINE L1 3134 3879 -2661 711 242 50 0 chr2 7549026 7549187 -243138667 + L1MD1 LINE L1 6055 6223 -19 618 265 52 45 chr2 7549364 7549768 -243138086 + L1MEc LINE L1 801 1207 -5356 1033 164 61 5 chr2 7549780 7549994 -243137860 + AluJb SINE Alu 86 311 -1 262 304 44 0 chr2 7550023 7550158 -243137696 + L1MEc LINE L1 1246 1386 -5177 1596 263 72 63 chr2 7550175 7550305 -243137549 + L1MEc LINE L1 1334 1461 -4921 1507 164 33 18 chr2 7550305 7550580 -243137274 + AluSq SINE Alu 23 301 -12 1596 263 72 63 chr2 7550580 7551693 -243136161 + L1MEc LINE L1 1461 2701 -3681 30611 33 0 1 chr2 7551699 7556078 -243131776 + L1PA4 LINE L1 1777 6152 -3 3827 231 42 35 chr2 7556093 7557345 -243130509 + L1MEc LINE L1 2709 3969 -2413 192 158 0 0 chr2 7557606 7557644 -243130210 + (CA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 7557855 7557876 -243129978 + AT_rich Low_complexity Low_complexity 1 21 0 182 203 108 54 chr2 7558027 7558101 -243129753 + MIR SINE MIR 112 189 -73 2153 74 15 4 chr2 7558134 7558405 -243129449 - AluSc SINE Alu -7 302 29 735 285 45 4 chr2 7558502 7558748 -243129106 + MIR SINE MIR 3 258 -4 409 317 94 6 chr2 7559251 7559431 -243128423 + MIR SINE MIR 53 248 -14 25 0 0 0 chr2 7559884 7559909 -243127945 + AT_rich Low_complexity Low_complexity 1 25 0 1008 72 0 226 chr2 7560006 7560227 -243127627 - Charlie3 DNA MER1_type -8 2702 2532 321 322 72 90 chr2 7560275 7560620 -243127234 - L1MEd LINE L1 -5769 350 12 23 0 0 0 chr2 7560640 7560663 -243127191 + AT_rich Low_complexity Low_complexity 1 23 0 281 233 189 83 chr2 7560877 7561057 -243126797 - MLT1J LTR MaLR -189 322 124 280 271 90 14 chr2 7561620 7561764 -243126090 - HAL1b LINE L1 -511 837 683 298 236 36 0 chr2 7561764 7561874 -243125980 + CT-rich Low_complexity Low_complexity 4 117 0 340 330 52 16 chr2 7562031 7562225 -243125629 - HAL1b LINE L1 -801 547 347 355 223 18 0 chr2 7562751 7562863 -243124991 + (TA)n Simple_repeat Simple_repeat 2 115 0 198 143 0 0 chr2 7564391 7564426 -243123428 + (CA)n Simple_repeat Simple_repeat 2 36 0 207 360 12 0 chr2 7564426 7564512 -243123342 + L3 LINE CR1 1335 1421 -156 948 122 23 0 chr2 7565746 7565918 -243121936 + CT-rich Low_complexity Low_complexity 4 179 0 282 29 0 0 chr2 7566057 7566092 -243121762 + (TG)n Simple_repeat Simple_repeat 1 35 0 182 265 20 0 chr2 7566499 7566548 -243121306 - L2 LINE L2 -1 3312 3263 180 0 0 0 chr2 7566751 7566771 -243121083 + (A)n Simple_repeat Simple_repeat 1 20 0 274 178 68 14 chr2 7566908 7566981 -243120873 + MER116 DNA Mariner 2 78 -2 824 234 10 39 chr2 7569337 7569542 -243118312 + MER58A DNA MER1_type 21 219 -5 249 312 104 40 chr2 7569784 7569986 -243117868 - L3 LINE CR1 -26 1551 1337 304 370 7 22 chr2 7570370 7570505 -243117349 + MIR3 SINE MIR 10 142 -66 224 277 71 36 chr2 7571150 7571262 -243116592 + MER5A DNA MER1_type 10 125 -64 2132 117 176 16 chr2 7571329 7571698 -243116156 - MSTA LTR MaLR 0 428 1 1007 167 0 0 chr2 7571913 7572069 -243115785 + AluSg/x SINE Alu 135 290 -20 312 307 97 40 chr2 7572079 7572307 -243115547 - L2 LINE L2 -924 2390 2150 185 116 0 47 chr2 7572294 7572337 -243115517 + (GAGAA)n Simple_repeat Simple_repeat 5 45 0 * 1969 201 52 0 chr2 7574126 7574530 -243113324 - MLT1C LTR MaLR -9 458 34 189 154 0 0 chr2 7574533 7574572 -243113282 + T-rich Low_complexity Low_complexity 1 39 0 244 366 20 0 chr2 7574612 7574713 -243113141 - L2 LINE L2 -28 3244 3142 376 278 148 61 chr2 7575329 7575559 -243112295 + MIR SINE MIR 5 254 -8 205 323 15 0 chr2 7575638 7575703 -243112151 + L2 LINE L2 3207 3272 0 2689 148 38 68 chr2 7576485 7576671 -243111183 - L1MA4 LINE L1 -8 6292 6102 1905 141 11 7 chr2 7576671 7576955 -243110899 + AluSx SINE Alu 1 285 -27 2689 148 38 68 chr2 7576955 7576968 -243110886 - L1MA4 LINE L1 -198 6102 6090 288 0 0 0 chr2 7576968 7577000 -243110854 + (TA)n Simple_repeat Simple_repeat 1 32 0 2689 148 38 68 chr2 7577000 7577359 -243110495 - L1MA4 LINE L1 -210 6090 5750 289 289 0 0 chr2 7578417 7578500 -243109354 + MIR SINE MIR 172 254 -8 1798 188 61 54 chr2 7578566 7579264 -243108590 + L1ME4a LINE L1 2074 2755 -3785 1047 161 11 0 chr2 7579266 7579440 -243108414 + AluSg/x SINE Alu 137 312 0 6933 231 91 47 chr2 7579440 7582618 -243105236 + L1ME4a LINE L1 2746 6066 -687 537 95 24 0 chr2 7582626 7582710 -243105144 + L1MD2 LINE L1 6272 6357 -2 222 272 27 95 chr2 7582753 7582900 -243104954 + L2 LINE L2 3168 3304 -9 426 313 97 14 chr2 7583187 7583404 -243104450 - MIR SINE MIR 0 262 28 1780 188 0 0 chr2 7583523 7583836 -243104018 - AluJb SINE Alu 0 313 1 2111 115 26 10 chr2 7584250 7584554 -243103300 + AluSq SINE Alu 1 309 -4 450 287 8 0 chr2 7586957 7587079 -243100775 + MER94 DNA DNA 7 129 -5 320 260 7 55 chr2 7588315 7588461 -243099393 + L1ME4a LINE L1 6362 6500 -15 843 159 0 0 chr2 7589792 7589924 -243097930 + FLAM_C SINE Alu 2 133 0 225 231 51 51 chr2 7590219 7590297 -243097557 + MIR SINE MIR 111 188 -74 33 66 0 0 chr2 7590411 7590472 -243097382 + AT_rich Low_complexity Low_complexity 1 61 0 195 129 0 0 chr2 7590904 7590935 -243096919 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 183 184 20 20 chr2 7591191 7591240 -243096614 + MIR SINE MIR 25 73 -135 1302 171 80 47 chr2 7592263 7592562 -243095292 + AluJo SINE Alu 4 312 0 1320 219 67 31 chr2 7593829 7594189 -243093665 - MLT1B LTR MaLR -2 388 14 189 242 0 15 chr2 7594736 7594802 -243093052 - L2 LINE L2 -3 3269 3205 314 245 0 57 chr2 7595270 7595400 -243092454 + MIR SINE MIR 85 205 -57 280 284 159 28 chr2 7595502 7595678 -243092176 + MIR SINE MIR 21 219 -43 1931 173 80 30 chr2 7596090 7596504 -243091350 - MLT2D LTR ERVL 0 534 1 334 278 31 0 chr2 7596504 7596601 -243091253 + L2 LINE L2 3172 3271 -1 227 313 117 0 chr2 7597274 7597402 -243090452 - MIR3 SINE MIR -24 184 42 2946 198 37 7 chr2 7598922 7599537 -243088317 - MER99 DNA DNA -3 825 192 38 22 0 0 chr2 7600171 7600216 -243087638 + AT_rich Low_complexity Low_complexity 1 45 0 482 272 0 0 chr2 7600216 7600319 -243087535 - MER99 DNA DNA -724 104 2 353 283 126 31 chr2 7600861 7601084 -243086770 - LTR16A LTR ERVL -1 449 206 1603 181 54 7 chr2 7601243 7601541 -243086313 - AluJo SINE Alu 0 312 1 1223 248 97 16 chr2 7602903 7603456 -243084398 + L1MEc LINE L1 2202 2770 -3445 743 343 65 14 chr2 7603456 7604022 -243083832 - L1MEc LINE L1 -5754 642 48 560 269 22 0 chr2 7604307 7604441 -243083413 + MLT1J1 LTR MaLR 2 138 -308 2394 103 0 0 chr2 7604763 7605065 -243082789 - AluSx SINE Alu -10 302 1 283 286 60 0 chr2 7605471 7605555 -243082299 + LTR50 LTR ERVL 1 89 -706 1708 188 3 13 chr2 7607083 7607397 -243080457 + AluJb SINE Alu 1 311 -1 2277 163 143 13 chr2 7608025 7608544 -243079310 + LTR49 LTR ERV1 1 653 0 2028 246 51 22 chr2 7609064 7609609 -243078245 - MER119 DNA MER1_type -5 578 18 296 278 122 0 chr2 7609668 7609783 -243078071 + MIR SINE MIR 43 171 -37 271 296 44 37 chr2 7609903 7610038 -243077816 - MER5A DNA MER1_type -36 153 18 394 290 82 30 chr2 7611459 7611612 -243076242 - MIR SINE MIR -13 249 79 1967 132 31 0 chr2 7611612 7611899 -243075955 - AluY SINE Alu -15 296 1 394 290 82 30 chr2 7611899 7611976 -243075878 - MIR SINE MIR -183 79 7 1863 149 3 10 chr2 7612005 7612293 -243075561 + AluSx SINE Alu 1 286 -26 1128 184 130 27 chr2 7614574 7614873 -243072981 + MLT1C LTR MaLR 1 330 -137 687 241 0 14 chr2 7615044 7615185 -243072669 + MLT1C LTR MaLR 329 467 0 188 234 0 0 chr2 7616525 7616572 -243071282 - L2 LINE L2 -5 3308 3262 305 221 207 21 chr2 7616861 7617006 -243070848 + MIR SINE MIR 76 247 -15 2563 98 16 19 chr2 7617519 7617895 -243069959 + THE1C LTR MaLR 1 375 0 209 293 73 16 chr2 7619831 7619954 -243067900 + L2 LINE L2 3184 3313 0 23 54 0 0 chr2 7621064 7621101 -243066753 + AT_rich Low_complexity Low_complexity 1 37 0 203 388 0 0 chr2 7621515 7621595 -243066259 + L2 LINE L2 3190 3269 -3 2048 134 30 35 chr2 7621665 7622031 -243065823 + THE1B LTR MaLR 1 364 0 237 291 27 18 chr2 7623067 7623177 -243064677 - MER87 LTR ERV1 -32 509 399 195 364 34 17 chr2 7623549 7623667 -243064187 + MIR3 SINE MIR 4 123 -85 561 294 93 4 chr2 7623910 7624179 -243063675 - L1MCb LINE L1 -5163 882 590 26 0 0 0 chr2 7624313 7624339 -243063515 + AT_rich Low_complexity Low_complexity 1 26 0 321 335 34 28 chr2 7624518 7624694 -243063160 + MER5B DNA MER1_type 2 178 0 196 346 19 0 chr2 7624705 7624809 -243063045 + MER5A DNA MER1_type 4 109 -80 1343 229 15 76 chr2 7624879 7625285 -243062569 - MLT1B LTR MaLR -9 381 1 5307 98 35 4 chr2 7625438 7626189 -243061665 + MER4E LTR ERV1 1 774 -5 2003 114 4 0 chr2 7627188 7627491 -243060363 - AluSx SINE Alu 0 304 1 2037 108 10 25 chr2 7628105 7628419 -243059435 + AluSp SINE Alu 1 309 -4 204 322 77 7 chr2 7629018 7629161 -243058693 - MIR SINE MIR -62 200 48 264 317 12 0 chr2 7630069 7630151 -243057703 - MIR SINE MIR -107 155 73 663 153 0 0 chr2 7630261 7630392 -243057462 + (TAG)n Simple_repeat Simple_repeat 2 132 0 427 206 125 22 chr2 7630393 7630529 -243057325 - MIR SINE MIR -1 261 112 21 0 0 0 chr2 7632170 7632191 -243055663 + AT_rich Low_complexity Low_complexity 1 21 0 2106 96 4 0 chr2 7633748 7634062 -243053792 + AluSx SINE Alu 1 315 0 456 311 38 16 chr2 7634454 7634637 -243053217 + MIR SINE MIR 8 194 -68 213 94 0 0 chr2 7635135 7635167 -243052687 + (TCC)n Simple_repeat Simple_repeat 2 33 0 214 308 77 10 chr2 7635433 7635537 -243052317 - MIR SINE MIR -50 212 102 187 216 0 78 chr2 7636213 7636264 -243051590 - L2 LINE L2 -6 3307 3261 598 219 139 0 chr2 7638898 7639049 -243048805 + MIR SINE MIR 47 218 -44 1337 225 8 0 chr2 7640622 7640871 -243046983 + MLT1C LTR MaLR 207 457 -10 274 227 13 27 chr2 7640929 7641004 -243046850 + Charlie7 DNA MER1_type 29 102 -2510 23 68 0 0 chr2 7641108 7641152 -243046702 + AT_rich Low_complexity Low_complexity 1 44 0 2012 137 0 0 chr2 7641234 7641534 -243046320 + AluSq SINE Alu 11 310 -3 479 309 124 18 chr2 7642271 7642488 -243045366 + MIR SINE MIR 12 251 -11 2174 282 129 18 chr2 7643401 7644274 -243043580 + L2 LINE L2 1576 2545 -769 15569 123 27 5 chr2 7644344 7646704 -243041150 - Tigger1 DNA MER2_type -6 2412 1 304 240 62 121 chr2 7646839 7647294 -243040560 - L1MCc LINE L1 -4892 1531 1300 2396 97 77 3 chr2 7647425 7647764 -243040090 + THE1B LTR MaLR 1 364 0 294 333 140 0 chr2 7648101 7648215 -243039639 + MIR SINE MIR 97 226 -36 418 326 80 29 chr2 7649994 7650169 -243037685 - MIR3 SINE MIR -5 203 20 204 221 143 52 chr2 7650470 7650624 -243037230 - MIR3 SINE MIR -34 174 7 351 304 52 26 chr2 7650652 7650767 -243037087 - L2 LINE L2 -4 3309 3192 519 261 56 6 chr2 7651230 7651391 -243036463 - MER5B DNA MER1_type -8 170 2 2113 98 44 3 chr2 7651494 7651791 -243036063 + AluSq SINE Alu 1 309 -4 1028 119 68 6 chr2 7651852 7652029 -243035825 + MER53 DNA DNA 2 189 0 2017 140 7 0 chr2 7652223 7652531 -243035323 - AluSx SINE Alu -2 310 1 240 210 84 119 chr2 7652608 7652751 -243035103 - MIR SINE MIR -40 222 85 1205 199 66 6 chr2 7653635 7654073 -243033781 - MLT2B1 LTR ERVL 0 515 1 205 238 0 0 chr2 7654319 7654361 -243033493 + (CACG)n Simple_repeat Simple_repeat 4 45 0 2118 101 20 7 chr2 7654822 7655119 -243032735 - AluSx SINE Alu -11 301 1 245 360 141 27 chr2 7655442 7655853 -243032001 + L2 LINE L2 2851 3308 -5 279 0 0 0 chr2 7656213 7656244 -243031610 + (CACAA)n Simple_repeat Simple_repeat 4 34 0 2310 84 3 3 chr2 7656863 7657171 -243030683 - AluSp SINE Alu -5 308 1 295 268 14 0 chr2 7657171 7657242 -243030612 - MER5A DNA MER1_type -112 77 6 533 278 36 29 chr2 7660147 7660424 -243027430 + L1ME3A LINE L1 3803 4081 -2065 1970 153 38 46 chr2 7660426 7660793 -243027061 - THE1B LTR MaLR 0 364 1 364 327 36 0 chr2 7660836 7660946 -243026908 + MIR SINE MIR 16 129 -133 1699 182 90 54 chr2 7660952 7661396 -243026458 + MER31B LTR ERV1 7 466 0 511 260 0 0 chr2 7661403 7661530 -243026324 + MIR SINE MIR 136 262 0 21 0 0 0 chr2 7661608 7661629 -243026225 + AT_rich Low_complexity Low_complexity 1 21 0 1951 111 18 0 chr2 7661674 7661977 -243025877 + AluSp SINE Alu 1 308 0 328 293 79 0 chr2 7662058 7662273 -243025581 + L1ME3A LINE L1 4388 4619 -1527 237 233 58 39 chr2 7662323 7662426 -243025428 + L1ME3A LINE L1 4733 4837 -1309 357 281 80 76 chr2 7662457 7662681 -243025173 - MIR SINE MIR -4 258 34 233 179 0 0 chr2 7662984 7663023 -243024831 + L1ME3A LINE L1 5670 5708 -413 335 299 103 8 chr2 7663036 7663153 -243024701 + L1ME3A LINE L1 5743 5870 -300 1912 156 0 0 chr2 7663454 7663761 -243024093 + AluSx SINE Alu 1 307 -5 1212 302 160 43 chr2 7663770 7664320 -243023534 - L2 LINE L2 -633 2681 2197 2149 182 31 43 chr2 7664320 7664831 -243023023 + MLT1D LTR MaLR 1 505 0 1212 302 160 43 chr2 7664831 7665256 -243022598 - L2 LINE L2 -1117 2197 1592 432 336 32 19 chr2 7665340 7665584 -243022270 - LTR16A LTR ERVL -184 266 17 180 111 0 0 chr2 7665835 7665862 -243021992 + (GGGAA)n Simple_repeat Simple_repeat 2 28 0 194 348 29 0 chr2 7665921 7665990 -243021864 + MIR SINE MIR 64 134 -128 198 0 0 0 chr2 7666735 7666757 -243021097 + (TC)n Simple_repeat Simple_repeat 1 22 0 252 200 42 83 chr2 7667430 7667550 -243020304 + L1M4 LINE L1 2302 2416 -3730 195 42 0 0 chr2 7667583 7667607 -243020247 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 710 296 73 52 chr2 7667750 7667761 -243020093 - LTR16A LTR ERVL -59 398 389 2360 120 3 55 chr2 7667761 7668145 -243019709 + THE1B LTR MaLR 1 364 0 710 296 73 52 chr2 7668145 7668499 -243019355 - LTR16A LTR ERVL -68 389 16 654 352 43 26 chr2 7668647 7669229 -243018625 - HERV16 LTR ERVL -381 5383 4792 990 317 85 38 chr2 7669347 7670184 -243017670 - HERV16 LTR ERVL -879 4606 3718 1108 350 72 3 chr2 7670687 7671218 -243016636 - HERV16 LTR ERVL -1905 3091 2617 1167 291 81 31 chr2 7671421 7672285 -243015569 - HERV16 LTR ERVL -2381 2615 1715 1170 307 124 22 chr2 7672335 7673135 -243014719 - HERV16 LTR ERVL -3420 1576 818 753 77 19 0 chr2 7673167 7673271 -243014583 - AluY SINE Alu -9 302 197 284 315 63 9 chr2 7673295 7673406 -243014448 - HERV16 LTR ERVL -4347 649 533 278 277 0 0 chr2 7673474 7673539 -243014315 - HERV16 LTR ERVL -4570 426 362 768 264 30 26 chr2 7673733 7673964 -243013890 - LTR16A LTR ERVL -13 437 206 186 43 0 0 chr2 7674332 7674355 -243013499 + (TTG)n Simple_repeat Simple_repeat 2 24 0 763 162 0 0 chr2 7674364 7674481 -243013373 - FLAM_C SINE Alu -16 117 1 487 172 11 11 chr2 7674566 7674659 -243013195 - AluJ/FLAM SINE Alu -218 94 2 215 185 77 0 chr2 7675226 7675291 -243012563 + L2 LINE L2 3168 3237 -35 506 272 30 18 chr2 7676112 7676281 -243011573 + MIR SINE MIR 53 223 -39 187 359 23 23 chr2 7676462 7676593 -243011261 + MIR3 SINE MIR 51 181 -27 269 355 9 9 chr2 7677374 7677484 -243010370 + MIR3 SINE MIR 69 178 -30 1789 84 44 0 chr2 7678860 7679085 -243008769 + AluSq SINE Alu 1 235 -78 213 382 73 0 chr2 7679099 7679235 -243008619 + MIR3 SINE MIR 16 161 -47 237 343 114 14 chr2 7680093 7680233 -243007621 + L2 LINE L2 3118 3271 -1 193 222 206 0 chr2 7680275 7680338 -243007516 - L2 LINE L2 0 3272 3197 1027 206 40 0 chr2 7681033 7681261 -243006593 + MIR SINE MIR 25 261 -1 21 0 0 0 chr2 7681269 7681290 -243006564 + AT_rich Low_complexity Low_complexity 1 21 0 1622 197 49 42 chr2 7682921 7683307 -243004547 + MER63B DNA MER1_type 43 431 -5 221 342 28 0 chr2 7683848 7683994 -243003860 + MIR SINE MIR 15 146 -62 525 228 93 25 chr2 7684230 7684392 -243003462 + MER58B DNA MER1_type 169 341 0 191 287 42 77 chr2 7684785 7684917 -243002937 + MIR SINE MIR 36 169 -39 258 328 69 46 chr2 7684926 7685057 -243002797 - MER5A DNA MER1_type -22 167 34 435 19 0 0 chr2 7685210 7685262 -243002592 + (CA)n Simple_repeat Simple_repeat 2 53 0 219 238 0 49 chr2 7685966 7686043 -243001811 + CT-rich Low_complexity Low_complexity 1 116 0 185 288 188 29 chr2 7687035 7687205 -243000649 + MIR SINE MIR 34 230 -32 221 361 97 7 chr2 7687511 7687666 -243000188 - MIR3 SINE MIR -21 187 19 290 304 105 21 chr2 7687681 7687872 -242999982 + MIR SINE MIR 8 214 -48 222 284 231 12 chr2 7688721 7688890 -242998964 - MIR SINE MIR 0 262 57 1889 40 0 5 chr2 7689203 7689427 -242998427 - AluY SINE Alu -87 224 2 311 350 29 15 chr2 7689575 7689712 -242998142 - MER5A DNA MER1_type -48 141 3 354 23 0 0 chr2 7690089 7690132 -242997722 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2307 75 0 39 chr2 7690138 7690444 -242997410 - AluY SINE Alu -17 294 1 618 253 54 5 chr2 7691778 7691964 -242995890 + MIR SINE MIR 21 215 -47 242 324 15 0 chr2 7692376 7692444 -242995410 - L2 LINE L2 -219 3053 2985 2321 110 0 0 chr2 7693121 7693430 -242994424 + AluSc SINE Alu 1 309 0 368 271 65 0 chr2 7694029 7694136 -242993718 + MIR SINE MIR 119 232 -30 2189 110 0 43 chr2 7694171 7694498 -242993356 - AluSq SINE Alu 0 313 1 2383 92 7 0 chr2 7694909 7695212 -242992642 - AluSp SINE Alu -7 306 2 27 0 0 0 chr2 7695221 7695248 -242992606 + AT_rich Low_complexity Low_complexity 1 27 0 572 222 105 99 chr2 7696259 7696517 -242991337 + L1ME LINE L1 5504 5763 -407 481 168 19 0 chr2 7696592 7696699 -242991155 + (TA)n Simple_repeat Simple_repeat 1 109 0 2272 305 36 29 chr2 7696718 7697606 -242990248 + L1ME3A LINE L1 105 1224 -5635 897 239 81 10 chr2 7697864 7698161 -242989693 + L1ME3A LINE L1 1851 2168 -4791 * 1561 160 39 11 chr2 7698151 7698432 -242989422 + L1P LINE L1 3443 3731 -2415 3193 224 44 15 chr2 7698455 7699948 -242987906 + L1ME3A LINE L1 5425 6970 -11 1040 223 100 73 chr2 7701240 7701679 -242986175 - MLT2B1 LTR ERVL 0 520 70 927 108 31 0 chr2 7701681 7701810 -242986044 + AluSq/x SINE Alu 1 133 -179 383 183 14 0 chr2 7701819 7701890 -242985964 - MLT2B1 LTR ERVL -440 75 4 2268 111 0 0 chr2 7702437 7702734 -242985120 - AluSq SINE Alu -16 297 1 1299 206 104 41 chr2 7702823 7703188 -242984666 + MLT1B LTR MaLR 3 390 0 2288 109 0 10 chr2 7704045 7704357 -242983497 + AluSc SINE Alu 1 309 0 343 324 9 18 chr2 7704792 7704903 -242982951 - MIR SINE MIR -69 139 30 210 154 0 0 chr2 7705454 7705493 -242982361 + T-rich Low_complexity Low_complexity 3 41 0 2200 125 0 0 chr2 7706029 7706325 -242981529 - AluSx SINE Alu -16 296 1 504 224 33 26 chr2 7706347 7706499 -242981355 - MIR SINE MIR 0 262 110 283 23 23 0 chr2 7707231 7707275 -242980579 - L1MA3 LINE L1 0 6305 6261 1068 242 148 24 chr2 7707407 7707746 -242980108 + MLT1F LTR MaLR 133 513 -29 26 50 0 0 chr2 7707901 7707941 -242979913 + AT_rich Low_complexity Low_complexity 1 40 0 765 229 48 19 chr2 7707975 7708185 -242979669 + AluJo SINE Alu 5 220 -92 325 278 56 89 chr2 7708256 7708416 -242979438 + MER46C DNA MER2_type 7 156 -182 1934 104 4 0 chr2 7708416 7708665 -242979189 + AluSp SINE Alu 2 251 -62 325 278 56 89 chr2 7708665 7708774 -242979080 + MER46C DNA MER2_type 156 267 -71 1457 123 21 8 chr2 7708799 7709034 -242978820 + AluY SINE Alu 5 242 -69 402 316 0 0 chr2 7709262 7709433 -242978421 + A-rich Low_complexity Low_complexity 1 171 0 303 260 0 39 chr2 7709537 7709641 -242978213 - MIR SINE MIR -57 151 52 520 271 51 38 chr2 7709694 7709898 -242977956 + MIR SINE MIR 3 209 -53 2207 118 0 29 chr2 7710591 7710905 -242976949 + AluSx SINE Alu 1 305 -7 2157 112 3 13 chr2 7710918 7711222 -242976632 + AluSq SINE Alu 1 301 -12 1525 141 12 8 chr2 7711293 7711534 -242976320 + AluSq SINE Alu 1 242 -71 461 314 107 0 chr2 7711761 7711930 -242975924 + L1MC/D LINE L1 5525 5711 -2097 1005 209 29 9 chr2 7712014 7712224 -242975630 + AluJo SINE Alu 81 294 -18 1881 140 25 0 chr2 7712380 7712658 -242975196 + AluSx SINE Alu 1 285 -27 268 24 24 24 chr2 7712665 7712707 -242975147 + (TAAAA)n Simple_repeat Simple_repeat 4 45 0 254 289 7 94 chr2 7713006 7713155 -242974699 + MIR3 SINE MIR 59 194 -14 2354 98 0 0 chr2 7713431 7713727 -242974127 + AluY SINE Alu 1 296 -15 1176 187 52 38 chr2 7713828 7714095 -242973759 + AluJo SINE Alu 1 271 -41 268 284 0 11 chr2 7714454 7714542 -242973312 + CT-rich Low_complexity Low_complexity 3 89 0 1853 166 0 16 chr2 7714862 7715169 -242972685 - AluSx SINE Alu -6 306 5 1912 169 3 10 chr2 7715275 7715589 -242972265 - AluJb SINE Alu 0 312 1 185 284 20 59 chr2 7715609 7715711 -242972143 + L2 LINE L2 3139 3236 -36 372 43 0 0 chr2 7715713 7715759 -242972095 + (TGAA)n Simple_repeat Simple_repeat 2 47 0 198 217 33 24 chr2 7715869 7715963 -242971891 + MIR SINE MIR 85 181 -27 741 225 69 32 chr2 7716231 7716333 -242971521 - L1MB5 LINE L1 0 6174 6077 1714 166 0 34 chr2 7716333 7716629 -242971225 - AluJo SINE Alu -26 286 1 741 225 69 32 chr2 7716629 7716744 -242971110 - L1MB5 LINE L1 -97 6077 5949 1970 141 0 26 chr2 7716963 7717268 -242970586 - AluSx SINE Alu -15 297 1 276 100 0 0 chr2 7717330 7717370 -242970484 + (TC)n Simple_repeat Simple_repeat 1 40 0 1705 103 0 9 chr2 7717659 7717891 -242969963 + MER30 DNA MER1_type 1 230 0 1797 147 29 4 chr2 7718217 7718496 -242969358 - AluJo SINE Alu -18 294 9 2402 104 0 0 chr2 7718581 7718890 -242968964 + AluSx SINE Alu 1 309 -3 1583 155 0 4 chr2 7718990 7719229 -242968625 + AluJb SINE Alu 59 296 -16 303 223 39 77 chr2 7720001 7720131 -242967723 - L1MC5 LINE L1 -836 7125 7001 2145 130 3 0 chr2 7720132 7720431 -242967423 + AluSx SINE Alu 1 300 -12 270 113 9 209 chr2 7720648 7720750 -242967104 - L1ME1 LINE L1 -2 6176 6089 475 105 17 244 chr2 7720760 7720836 -242967018 - L1MA5A LINE L1 0 6297 6280 1767 172 3 0 chr2 7720836 7721121 -242966733 - AluJo SINE Alu -26 286 1 475 105 17 244 chr2 7721121 7721216 -242966638 - L1MA5A LINE L1 -17 6280 6165 662 127 9 0 chr2 7721240 7721350 -242966504 - L1MA5A LINE L1 -116 6181 6071 472 189 35 154 chr2 7721351 7721503 -242966351 - L1ME1 LINE L1 -59 6107 5983 2184 120 0 10 chr2 7721503 7721803 -242966051 - AluSx SINE Alu -15 297 1 472 189 35 154 chr2 7721803 7721851 -242966003 - L1ME1 LINE L1 -183 5983 5931 1243 167 26 0 chr2 7721863 7722096 -242965758 - AluSx SINE Alu -16 296 58 301 360 34 6 chr2 7722944 7723119 -242964735 + MIR SINE MIR 16 195 -67 3070 70 19 2 chr2 7723128 7723542 -242964312 + L1PA10 LINE L1 5743 6163 -5 24 0 0 0 chr2 7723618 7723642 -242964212 + AT_rich Low_complexity Low_complexity 1 24 0 621 167 79 0 chr2 7724868 7724982 -242962872 - Charlie1 DNA MER1_type -1 2760 2638 201 342 95 37 chr2 7725241 7725431 -242962423 - MIR SINE MIR -39 223 23 305 278 103 0 chr2 7725701 7725798 -242962056 + L2 LINE L2 3158 3264 -8 202 150 25 0 chr2 7725809 7725849 -242962005 + (TA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 7725857 7725886 -242961968 + AT_rich Low_complexity Low_complexity 1 29 0 292 244 154 41 chr2 7726887 7727010 -242960844 - L2 LINE L2 -1 3312 3176 271 373 54 54 chr2 7727099 7727378 -242960476 - L2 LINE L2 -340 2974 2696 22 35 0 0 chr2 7728257 7728286 -242959568 + AT_rich Low_complexity Low_complexity 1 29 0 183 298 0 18 chr2 7728801 7728858 -242958996 - MIR SINE MIR -126 136 81 1267 265 84 62 chr2 7729052 7729190 -242958664 + MLT1H1 LTR MaLR 2 135 -420 736 209 62 0 chr2 7729190 7729367 -242958487 - MER53 DNA DNA -1 188 1 1267 265 84 62 chr2 7729367 7729714 -242958140 + MLT1H1 LTR MaLR 135 498 -57 1802 135 14 0 chr2 7729714 7729995 -242957859 + AluSc SINE Alu 1 285 -24 1079 116 7 0 chr2 7730033 7730180 -242957674 + THE1B LTR MaLR 1 148 -216 1816 150 3 3 chr2 7730641 7730935 -242956919 + AluJb SINE Alu 1 294 -18 2562 35 0 0 chr2 7731200 7731510 -242956344 + AluY SINE Alu 1 310 -1 261 0 0 0 chr2 7732599 7732628 -242955226 + (CA)n Simple_repeat Simple_repeat 1 29 0 270 0 0 0 chr2 7732704 7732734 -242955120 + (A)n Simple_repeat Simple_repeat 1 30 0 2760 115 24 21 chr2 7733877 7734302 -242953552 + MSTB LTR MaLR 1 426 0 222 313 15 0 chr2 7734932 7734999 -242952855 - MIR SINE MIR -63 145 78 252 325 150 35 chr2 7735531 7735731 -242952123 + MIR SINE MIR 34 256 -6 325 0 44 0 chr2 7736069 7736114 -242951740 + (CA)n Simple_repeat Simple_repeat 1 47 0 213 262 87 39 chr2 7736123 7736226 -242951628 + L3 LINE CR1 355 462 -1115 274 173 74 62 chr2 7736258 7736339 -242951515 - MIR SINE MIR -81 181 100 184 231 77 90 chr2 7736542 7736620 -242951234 - MIR SINE MIR -165 97 21 216 253 0 76 chr2 7738119 7738198 -242949656 - L2 LINE L2 0 3313 3241 1065 241 119 71 chr2 7739059 7739553 -242948301 + MLT1K LTR MaLR 70 587 -1 228 220 17 0 chr2 7740099 7740158 -242947696 + MER69 DNA AcHobo 22 81 -96 1065 259 69 13 chr2 7740609 7740984 -242946870 + MER69 DNA AcHobo 2094 2489 -37 1919 154 62 11 chr2 7742451 7742808 -242945046 - THE1C LTR MaLR 0 375 1 319 333 124 7 chr2 7743205 7743358 -242944496 - MIR SINE MIR -57 205 35 283 323 40 16 chr2 7743841 7743965 -242943889 + L3 LINE CR1 1385 1511 -66 1912 146 3 0 chr2 7744288 7744589 -242943265 + AluJb SINE Alu 1 302 -10 326 258 50 42 chr2 7745677 7745797 -242942057 - MIR SINE MIR -52 210 90 247 311 13 10 chr2 7745931 7746093 -242941761 - MIR SINE MIR -1 261 48 208 305 95 38 chr2 7746426 7746531 -242941323 + MER5B DNA MER1_type 54 164 -14 249 293 207 21 chr2 7746574 7746714 -242941140 + MER5A DNA MER1_type 4 169 -20 476 240 147 8 chr2 7747189 7747318 -242940536 + MIR SINE MIR 72 218 -44 180 0 0 0 chr2 7747364 7747384 -242940470 + (CA)n Simple_repeat Simple_repeat 1 20 0 297 198 58 12 chr2 7747451 7747537 -242940317 + L1ME4a LINE L1 6030 6119 -2 255 328 15 21 chr2 7747655 7747813 -242940041 + MIR SINE MIR 58 212 -50 230 154 26 0 chr2 7749099 7749138 -242938716 + MLT1I LTR MaLR 98 137 -272 569 273 97 6 chr2 7750975 7751151 -242936703 - MIR SINE MIR -55 207 16 673 296 71 4 chr2 7752786 7753012 -242934842 - MIR SINE MIR 0 262 22 223 198 49 111 chr2 7754296 7754377 -242933477 + MIR SINE MIR 111 186 -76 312 262 98 25 chr2 7754702 7754824 -242933030 + MER115 DNA AcHobo 100 230 -463 638 237 100 52 chr2 7754936 7755185 -242932669 + MER115 DNA AcHobo 426 686 -7 195 100 0 0 chr2 7755385 7755415 -242932439 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 354 230 97 26 chr2 7755415 7755528 -242932326 - L2 LINE L2 -13 3300 3180 23 0 0 0 chr2 7756139 7756162 -242931692 + AT_rich Low_complexity Low_complexity 1 23 0 1252 138 0 0 chr2 7756600 7756803 -242931051 + L1MA5 LINE L1 6097 6299 -1 700 236 44 58 chr2 7758413 7758638 -242929216 + MIR SINE MIR 31 252 -10 586 130 130 0 chr2 7759000 7759138 -242928716 + THE1B LTR MaLR 209 364 0 267 111 0 0 chr2 7759142 7759178 -242928676 + MLT1G LTR MaLR 555 590 0 1903 211 74 18 chr2 7759920 7760365 -242927489 + MLT1D LTR MaLR 36 505 0 504 324 89 12 chr2 7760377 7760624 -242927230 + L2 LINE L2 2671 2936 -378 270 307 64 21 chr2 7760624 7760819 -242927035 + MLT1J2 LTR MaLR 1 207 -239 205 293 49 37 chr2 7760889 7760971 -242926883 - L2 LINE L2 -620 2694 2612 860 245 28 36 chr2 7761009 7761262 -242926592 - MIR SINE MIR -10 252 2 2342 118 21 16 chr2 7761749 7762122 -242925732 - THE1C LTR MaLR 0 375 1 192 278 31 31 chr2 7762768 7762865 -242924989 + L2 LINE L2 2912 3008 -305 449 290 69 0 chr2 7762878 7763023 -242924831 - MIR SINE MIR -74 188 34 280 267 58 0 chr2 7763225 7763311 -242924543 - MER5A DNA MER1_type -77 112 22 509 206 109 23 chr2 7763365 7763540 -242924314 - LTR33 LTR ERVL -3 518 329 453 250 180 0 chr2 7765280 7765408 -242922446 - MIR SINE MIR -1 261 111 1926 125 21 14 chr2 7767040 7767329 -242920525 + AluSx SINE Alu 1 291 -21 306 170 0 0 chr2 7767337 7767384 -242920470 + MLT1G-int LTR MaLR 1684 1730 -5 1071 181 169 68 chr2 7767452 7767777 -242920077 - MLT1A1 LTR MaLR -7 358 1 2232 76 79 9 chr2 7768218 7768547 -242919307 + L1PB2 LINE L1 5799 6150 -1 506 284 43 38 chr2 7769428 7769544 -242918310 - L1ME4a LINE L1 -44 6077 5963 393 75 0 0 chr2 7769544 7769597 -242918257 + (CA)n Simple_repeat Simple_repeat 2 54 0 506 284 43 38 chr2 7769597 7769871 -242917983 - L1ME4a LINE L1 -158 5963 5685 240 35 0 0 chr2 7770834 7770863 -242916991 + (GGGGA)n Simple_repeat Simple_repeat 5 33 0 752 199 0 11 chr2 7770998 7771179 -242916675 + G-rich Low_complexity Low_complexity 2 180 0 201 195 0 0 chr2 7771177 7771218 -242916636 + GA-rich Low_complexity Low_complexity 1 41 0 * 310 207 14 83 chr2 7771328 7771473 -242916381 - MER103 DNA DNA 0 166 32 463 154 0 26 chr2 7771643 7771721 -242916133 + MER63 DNA MER1_type 42 743 -319 229 300 131 23 chr2 7772195 7772325 -242915529 - L2 LINE L2 -219 3053 2910 1478 211 42 20 chr2 7772920 7773275 -242914579 - MLT1A1 LTR MaLR -2 363 1 768 266 105 101 chr2 7774413 7774927 -242912927 + MLT1G LTR MaLR 18 581 -9 1437 194 24 78 chr2 7775440 7775852 -242912002 - MLT1B LTR MaLR 0 390 1 534 239 56 0 chr2 7775871 7776013 -242911841 + MLT1C LTR MaLR 317 466 -1 206 256 12 73 chr2 7776154 7776236 -242911618 + GA-rich Low_complexity Low_complexity 2 78 0 525 299 32 87 chr2 7776806 7777163 -242910691 - L2 LINE L2 -887 2427 2101 1517 252 24 37 chr2 7777163 7777674 -242910180 + MLT1D LTR MaLR 1 504 -1 525 299 32 87 chr2 7777674 7777785 -242910069 - L2 LINE L2 -1213 2101 1985 309 377 8 8 chr2 7777938 7778060 -242909794 + MIR3 SINE MIR 69 190 -18 488 125 0 12 chr2 7780257 7780337 -242907517 - L1MA5 LINE L1 -125 6175 6097 23 0 0 0 chr2 7780775 7780798 -242907056 + AT_rich Low_complexity Low_complexity 1 23 0 1580 112 20 24 chr2 7781425 7781676 -242906178 - MSTB LTR MaLR -176 250 1 875 254 94 94 chr2 7783111 7783151 -242904703 - MLT1H1 LTR MaLR 0 555 516 2546 100 19 6 chr2 7783151 7783510 -242904344 - THE1B LTR MaLR 0 364 1 875 254 94 94 chr2 7783510 7783548 -242904306 - MLT1H1 LTR MaLR -39 516 479 1804 135 14 0 chr2 7783548 7783829 -242904025 - AluSc SINE Alu -24 285 1 875 254 94 94 chr2 7783829 7784163 -242903691 - MLT1H1 LTR MaLR -75 480 142 1867 155 0 13 chr2 7784479 7784788 -242903066 + AluSx SINE Alu 1 305 -7 463 157 67 94 chr2 7785063 7785237 -242902617 - L1MA8 LINE L1 -3 6288 6120 2049 124 3 7 chr2 7785279 7785586 -242902268 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr2 7785625 7785648 -242902206 + AT_rich Low_complexity Low_complexity 1 23 0 877 183 89 10 chr2 7786083 7786389 -242901465 + L1MC/D LINE L1 5122 5446 -760 272 321 46 18 chr2 7786504 7786613 -242901241 + HAL1b LINE L1 800 911 -437 471 97 0 0 chr2 7787421 7787483 -242900371 - Alu SINE Alu -255 63 2 1865 129 41 7 chr2 7787589 7787884 -242899970 + AluSx SINE Alu 3 307 -5 1241 226 79 8 chr2 7788042 7788409 -242899445 - LTR37A LTR ERV1 0 426 34 7177 58 1 0 chr2 7788526 7789747 -242898107 + L1PA7 LINE L1 4957 6178 0 1946 114 3 10 chr2 7791814 7792103 -242895751 - AluSx SINE Alu -25 287 1 1434 191 3 3 chr2 7793394 7793697 -242894157 - AluSg SINE Alu -7 303 1 1122 314 46 24 chr2 7793701 7794242 -242893612 - L2 LINE L2 -541 2773 2221 267 318 61 21 chr2 7794280 7794436 -242893418 - MIR SINE MIR -62 146 9 429 122 0 0 chr2 7794616 7794690 -242893164 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 214 282 51 0 chr2 7795125 7795206 -242892648 - MIR SINE MIR -42 166 79 1012 127 10 35 chr2 7795218 7795643 -242892211 + (GGATG)n Simple_repeat Simple_repeat 1 591 0 231 146 0 0 chr2 7797060 7797101 -242890753 + (T)n Simple_repeat Simple_repeat 1 41 0 180 268 0 0 chr2 7797161 7797202 -242890652 + MIR3 SINE MIR 168 208 0 1822 153 10 3 chr2 7798202 7798510 -242889344 - AluSx SINE Alu -2 310 1 196 298 119 0 chr2 7798716 7798800 -242889054 + L2 LINE L2 3171 3264 -8 428 333 91 15 chr2 7799259 7799457 -242888397 + MIR SINE MIR 39 251 -11 210 320 87 10 chr2 7799983 7800086 -242887768 - L2 LINE L2 -4 3268 3158 332 329 73 81 chr2 7800199 7800543 -242887311 + L2 LINE L2 2932 3272 0 648 259 165 35 chr2 7800828 7800928 -242886926 + L1 LINE L1 3527 3613 -2533 1481 187 20 13 chr2 7800928 7801227 -242886627 - AluJb SINE Alu -11 301 1 648 259 165 35 chr2 7801227 7801496 -242886358 + L1 LINE L1 3613 3944 -2202 22 35 0 0 chr2 7801627 7801656 -242886198 + AT_rich Low_complexity Low_complexity 1 29 0 367 310 141 46 chr2 7801707 7801991 -242885863 + L1 LINE L1 4025 4335 -1811 1833 152 0 3 chr2 7802112 7802416 -242885438 + AluSx SINE Alu 1 303 0 23 0 0 0 chr2 7802619 7802642 -242885212 + AT_rich Low_complexity Low_complexity 1 23 0 276 296 87 36 chr2 7802866 7803062 -242884792 - L2 LINE L2 -212 3060 2855 262 232 0 0 chr2 7803142 7803198 -242884656 + MER4-int LTR ERV1 1107 1162 -5436 615 259 0 0 chr2 7803198 7803748 -242884106 + (TG)n Simple_repeat Simple_repeat 1 550 0 370 346 82 27 chr2 7803774 7804150 -242883704 - L2 LINE L2 -593 2721 2325 188 327 131 13 chr2 7804737 7804890 -242882964 - MIR SINE MIR -57 205 35 260 331 40 16 chr2 7805373 7805497 -242882357 + L3 LINE CR1 1385 1511 -66 1919 146 3 0 chr2 7805820 7806122 -242881732 + AluJb SINE Alu 1 303 -9 231 254 136 80 chr2 7807181 7807394 -242880460 - MIR SINE MIR -25 237 13 208 305 95 38 chr2 7807963 7808068 -242879786 + MER5B DNA MER1_type 54 164 -14 219 317 19 29 chr2 7808111 7808215 -242879639 + MER5A DNA MER1_type 4 106 -83 290 275 18 46 chr2 7809097 7809206 -242878648 + MIR SINE MIR 37 142 -66 324 350 0 0 chr2 7809454 7809557 -242878297 + CT-rich Low_complexity Low_complexity 4 106 0 1993 142 0 0 chr2 7809664 7809966 -242877888 + AluSx SINE Alu 1 302 -10 555 16 0 0 chr2 7809973 7810037 -242877817 + (GGAA)n Simple_repeat Simple_repeat 4 67 0 21 57 0 0 chr2 7811178 7811213 -242876641 + AT_rich Low_complexity Low_complexity 1 35 0 609 160 111 50 chr2 7811214 7811395 -242876459 + MER20 DNA MER1_type 1 192 -27 2067 125 0 0 chr2 7815402 7815699 -242872155 + AluSg SINE Alu 1 297 -13 404 236 6 0 chr2 7816216 7816394 -242871460 + CT-rich Low_complexity Low_complexity 2 180 0 542 307 53 5 chr2 7816809 7816998 -242870856 - MIR SINE MIR -1 261 64 1992 133 0 0 chr2 7817160 7817460 -242870394 + AluSx SINE Alu 1 300 -12 249 195 13 52 chr2 7819498 7819575 -242868279 - MLT1J LTR MaLR -11 604 429 535 288 112 15 chr2 7820422 7820627 -242867227 - MIR SINE MIR -10 252 28 309 150 17 0 chr2 7820974 7821034 -242866820 + MER96B DNA MER1_type? 50 110 -307 976 119 3 226 chr2 7821047 7821384 -242866470 - L1MA4 LINE L1 -9 6291 6030 493 72 0 12 chr2 7821415 7821498 -242866356 + MER96B DNA MER1_type? 97 178 -239 2193 153 75 0 chr2 7821596 7821994 -242865860 - MSTA LTR MaLR 0 428 1 329 295 0 0 chr2 7823376 7823471 -242864383 + (CA)n Simple_repeat Simple_repeat 2 96 0 223 247 0 90 chr2 7823577 7823755 -242864099 + (CCCCAA)n Simple_repeat Simple_repeat 6 167 0 242 304 78 35 chr2 7824933 7825048 -242862806 + L2 LINE L2 3186 3305 -8 408 238 57 78 chr2 7825331 7825454 -242862400 - L1ME4a LINE L1 0 6121 6002 1828 162 26 18 chr2 7825454 7825793 -242862061 - MER2 DNA MER2_type 0 344 3 408 238 57 78 chr2 7825793 7825862 -242861992 - L1ME4a LINE L1 -119 6002 5933 242 235 37 25 chr2 7825885 7825966 -242861888 + GA-rich Low_complexity Low_complexity 4 85 0 2332 71 0 0 chr2 7825991 7826285 -242861569 + AluY SINE Alu 2 295 -16 860 318 50 33 chr2 7826440 7827087 -242860767 - L1MC4a LINE L1 -489 5677 5254 480 289 114 48 chr2 7827435 7827847 -242860007 - L1MC4a LINE L1 -1374 4772 4334 193 324 59 0 chr2 7828800 7828868 -242858986 - MIR SINE MIR -6 256 185 426 208 77 54 chr2 7828900 7829030 -242858824 + Zaphod DNA AcHobo 24 156 -3875 1630 205 89 27 chr2 7829037 7829486 -242858368 + MLT1D LTR MaLR 1 477 -28 2118 244 92 34 chr2 7829516 7830300 -242857554 + Zaphod DNA AcHobo 161 989 -3042 765 184 40 17 chr2 7830301 7830475 -242857379 + Zaphod DNA AcHobo 3597 3774 -257 2057 116 7 10 chr2 7830782 7831092 -242856762 - AluSx SINE Alu -3 309 1 493 293 84 27 chr2 7831351 7831576 -242856278 + MIR SINE MIR 12 249 -13 256 245 174 52 chr2 7831652 7831807 -242856047 + MER5A DNA MER1_type 13 186 -3 513 269 40 23 chr2 7831814 7831989 -242855865 + MER5B DNA MER1_type 1 178 0 892 182 109 28 chr2 7832026 7832180 -242855674 + ORSL DNA AcHobo 9 192 -83 5560 48 6 0 chr2 7832180 7832853 -242855001 - L1PA7 LINE L1 -5 6149 5473 892 182 109 28 chr2 7832853 7832945 -242854909 + ORSL DNA AcHobo 192 275 0 198 217 0 36 chr2 7833047 7833130 -242854724 + GA-rich Low_complexity Low_complexity 3 82 0 27 0 0 0 chr2 7833601 7833628 -242854226 + AT_rich Low_complexity Low_complexity 1 27 0 291 268 0 0 chr2 7834509 7834580 -242853274 + GA-rich Low_complexity Low_complexity 3 73 0 1883 307 73 44 chr2 7835182 7835765 -242852089 + ERVL LTR ERVL 74 639 -4357 3276 133 82 0 chr2 7835765 7836252 -242851602 + MER1A DNA MER1_type 1 527 0 1883 307 73 44 chr2 7836252 7836774 -242851080 + ERVL LTR ERVL 639 1211 -3785 1094 304 92 27 chr2 7837121 7837941 -242849913 + ERVL LTR ERVL 1709 2631 -2691 348 305 106 69 chr2 7838128 7838436 -242849418 + ERVL LTR ERVL 4355 4687 -1077 1848 112 0 121 chr2 7838436 7838776 -242849078 + AluSx SINE Alu 1 299 -3 348 305 106 69 chr2 7838776 7838929 -242848925 + ERVL LTR ERVL 4687 4833 -931 294 286 84 59 chr2 7838967 7839240 -242848614 + ERVL LTR ERVL 4980 5259 -505 683 328 37 61 chr2 7839929 7840411 -242847443 + L1MEd LINE L1 811 1259 -1248 185 299 26 65 chr2 7841099 7841176 -242846678 - L2 LINE L2 -223 3049 2976 424 282 103 20 chr2 7841516 7841711 -242846143 + MIR SINE MIR 48 258 -4 1831 146 14 0 chr2 7843360 7843674 -242844180 - AluSx SINE Alu 0 312 1 340 301 9 9 chr2 7843982 7844095 -242843759 + MER94 DNA DNA 1 113 -21 185 62 0 31 chr2 7844535 7844567 -242843287 + (TA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr2 7844898 7844919 -242842935 + AT_rich Low_complexity Low_complexity 1 21 0 1662 165 7 14 chr2 7844919 7845216 -242842638 + AluJb SINE Alu 1 295 -17 249 315 87 47 chr2 7846775 7846902 -242840952 + L2 LINE L2 3141 3272 0 444 258 44 85 chr2 7848426 7848570 -242839284 + L1ME4a LINE L1 5530 5661 -460 2269 97 3 0 chr2 7848570 7848880 -242838974 + AluSp SINE Alu 1 311 -2 444 258 44 85 chr2 7848880 7848983 -242838871 + L1ME4a LINE L1 5661 5767 -354 4188 80 11 25 chr2 7849057 7849619 -242838235 - MER41A LTR ERV1 0 554 1 402 366 24 0 chr2 7849628 7849792 -242838062 + MIR SINE MIR 83 250 -12 339 232 89 0 chr2 7849980 7850092 -242837762 + L1ME4a LINE L1 5991 6112 -9 241 269 0 0 chr2 7850136 7850188 -242837666 - L3 LINE CR1 -7 1570 1519 335 277 32 11 chr2 7850336 7850430 -242837424 + L2 LINE L2 3173 3268 -4 3751 142 48 2 chr2 7850585 7851192 -242836662 + MER41B LTR ERV1 1 635 0 717 237 19 13 chr2 7852452 7852608 -242835246 - MER5B DNA MER1_type -21 157 1 350 311 68 0 chr2 7853042 7853145 -242834709 - L2 LINE L2 -46 3226 3117 2747 133 166 0 chr2 7853438 7853890 -242833964 - MER1A DNA MER1_type -1 528 2 316 296 86 49 chr2 7854490 7854652 -242833202 - MIR3 SINE MIR -11 197 30 711 276 70 0 chr2 7857307 7857506 -242830348 - MIR SINE MIR -36 226 14 402 21 0 0 chr2 7860153 7860200 -242827654 + (CATA)n Simple_repeat Simple_repeat 1 47 0 473 276 21 91 chr2 7860879 7861122 -242826732 + HAL1 LINE L1 1034 1259 -1248 570 277 70 18 chr2 7861151 7861436 -242826418 + HAL1 LINE L1 1374 1673 -834 566 192 54 15 chr2 7861465 7861595 -242826259 - MIR SINE MIR -20 242 108 2256 87 0 7 chr2 7862015 7862325 -242825529 + AluY SINE Alu 1 308 -3 22 88 0 0 chr2 7862405 7862462 -242825392 + AT_rich Low_complexity Low_complexity 1 57 0 303 248 111 26 chr2 7862489 7862606 -242825248 + HAL1b LINE L1 746 872 -476 1100 173 82 8 chr2 7862634 7862965 -242824889 + L1MC/D LINE L1 5097 5446 -760 272 321 46 18 chr2 7863080 7863189 -242824665 + HAL1b LINE L1 800 911 -437 922 214 66 26 chr2 7863876 7864180 -242823674 - MER33 DNA MER1_type 0 324 9 410 318 88 7 chr2 7864448 7864596 -242823258 + MIR SINE MIR 88 247 -15 2653 10 0 0 chr2 7866237 7866533 -242821321 - AluYb8 SINE Alu -2 316 21 319 333 111 0 chr2 7866695 7866830 -242821024 + L2 LINE L2 3121 3270 -2 2188 114 0 0 chr2 7868300 7868606 -242819248 - AluSx SINE Alu -6 306 1 440 300 36 0 chr2 7868608 7868748 -242819106 - MIR SINE MIR -70 192 48 200 274 219 14 chr2 7869645 7869791 -242818063 + MIR SINE MIR 87 262 0 198 290 87 0 chr2 7870000 7870069 -242817785 - MIR SINE MIR -136 126 52 323 320 66 39 chr2 7870869 7871050 -242816804 - MIR SINE MIR -57 205 20 433 188 10 30 chr2 7871803 7871904 -242815950 - MIR3 SINE MIR -7 201 103 212 320 30 40 chr2 7872592 7872692 -242815162 + MIR SINE MIR 45 143 -65 335 333 79 12 chr2 7873779 7873944 -242813910 + L1MB4 LINE L1 4637 4812 -1334 242 266 11 21 chr2 7874011 7874105 -242813749 + L1MB4 LINE L1 4918 5010 -1136 2459 218 3 59 chr2 7874319 7874581 -242813273 + L1MB4 LINE L1 5570 5845 -335 2373 57 0 63 chr2 7874581 7874913 -242812941 + AluY SINE Alu 1 311 0 2459 218 3 59 chr2 7874913 7875289 -242812565 + L1MB4 LINE L1 5845 6174 -6 1554 202 31 17 chr2 7875289 7875646 -242812208 + L1MB7 LINE L1 5814 6175 -9 920 291 137 18 chr2 7875664 7876283 -242811571 + L1ME3A LINE L1 5263 5955 -215 1281 124 30 0 chr2 7876491 7876692 -242811162 + L1PA10 LINE L1 5962 6168 0 2200 91 18 3 chr2 7877883 7878168 -242809686 - AluSx SINE Alu -14 298 10 298 154 0 0 chr2 7878753 7878805 -242809049 + MADE1 DNA Mariner 29 80 0 754 138 0 36 chr2 7878867 7879005 -242808849 - FLAM_C SINE Alu 0 133 1 528 122 0 0 chr2 7879446 7879528 -242808326 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 246 255 94 54 chr2 7881314 7881463 -242806391 - MLT1K LTR MaLR -13 575 421 217 260 77 96 chr2 7881646 7881750 -242806104 - MER5A DNA MER1_type -84 105 4 332 287 0 23 chr2 7881761 7881848 -242806006 - MIR SINE MIR -165 97 13 312 27 0 0 chr2 7883530 7883567 -242804287 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 296 283 137 47 chr2 7884909 7885121 -242802733 + MLT1L LTR MaLR 2 232 -383 35 0 0 0 chr2 7885832 7885867 -242801987 + AT_rich Low_complexity Low_complexity 1 35 0 682 324 29 11 chr2 7885882 7886154 -242801700 + MLT1L LTR MaLR 6 282 -333 400 177 76 0 chr2 7886293 7886372 -242801482 - MLT1J1 LTR MaLR -123 323 239 542 195 37 0 chr2 7886587 7886721 -242801133 - MLT1J1 LTR MaLR -277 173 25 * 547 229 30 8 chr2 7886718 7886849 -242801005 - MER45A DNA AcHobo -30 148 15 578 111 30 0 chr2 7887664 7887763 -242800091 + (ATGGTG)n Simple_repeat Simple_repeat 4 105 0 336 276 143 0 chr2 7888213 7888318 -242799536 - MIR SINE MIR -20 242 123 1787 125 86 44 chr2 7888535 7888895 -242798959 - THE1C LTR MaLR 0 375 1 315 325 24 24 chr2 7889096 7889265 -242798589 - L1ME4a LINE L1 -18 6103 5935 928 258 26 45 chr2 7889336 7889758 -242798096 - L1ME4a LINE L1 -161 5960 5547 2363 163 7 17 chr2 7891253 7891718 -242796136 - L1MB1 LINE L1 0 6168 5709 201 320 53 0 chr2 7891719 7891794 -242796060 - MIR SINE MIR -110 152 74 348 301 5 88 chr2 7892051 7892093 -242795761 - MER5B DNA MER1_type -1 177 133 2281 43 75 7 chr2 7892093 7892375 -242795479 - AluY SINE Alu -10 301 1 348 301 5 88 chr2 7892375 7892525 -242795329 - MER5B DNA MER1_type -45 133 1 338 271 47 0 chr2 7894315 7894422 -242793432 - MIR SINE MIR -48 214 103 507 211 141 14 chr2 7894662 7894804 -242793050 + MER3 DNA MER1_type 36 195 -14 411 246 42 0 chr2 7897123 7897241 -242790613 - MIR SINE MIR -62 146 24 2384 75 0 13 chr2 7897927 7898232 -242789622 - AluY SINE Alu -10 301 1 180 111 0 0 chr2 7899056 7899083 -242788771 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 979 238 125 35 chr2 7899360 7899785 -242788069 - MLT1C LTR MaLR -3 464 2 257 349 8 31 chr2 7902058 7902187 -242785667 - L3 LINE CR1 -63 1514 1389 229 280 32 32 chr2 7902259 7902352 -242785502 - MIR SINE MIR -74 188 96 216 318 59 35 chr2 7902438 7902608 -242785246 - L3 LINE CR1 -183 1394 1221 2729 131 20 4 chr2 7902732 7903189 -242784665 - L1PA16 LINE L1 0 6166 5703 299 274 228 23 chr2 7903844 7904059 -242783795 + MIR SINE MIR 1 259 -3 496 318 112 9 chr2 7904468 7904701 -242783153 + MIR SINE MIR 3 259 -3 185 91 0 30 chr2 7905520 7905553 -242782301 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 434 317 54 24 chr2 7906360 7906527 -242781327 - MIR SINE MIR -70 192 21 501 269 52 68 chr2 7906539 7906978 -242780876 + L1ME4a LINE L1 5520 5951 -170 381 246 36 14 chr2 7907131 7907269 -242780585 + L1ME4a LINE L1 5965 6105 -16 1433 130 5 0 chr2 7907281 7907488 -242780366 - AluSp SINE Alu -3 310 103 2120 142 52 37 chr2 7908835 7909379 -242778475 + MLT2A2 LTR ERVL 1 554 0 1521 166 18 3 chr2 7909750 7910033 -242777821 - MLT1B LTR MaLR -8 382 96 26 30 0 0 chr2 7910055 7910088 -242777766 + AT_rich Low_complexity Low_complexity 1 33 0 1980 42 98 0 chr2 7910159 7910424 -242777430 - L1PA5 LINE L1 -7 6147 5857 241 246 53 0 chr2 7910424 7910481 -242777373 - MLT1B LTR MaLR -330 60 1 211 347 0 11 chr2 7910712 7910807 -242777047 + MIR SINE MIR 71 164 -98 2389 167 5 14 chr2 7911162 7911594 -242776260 + MSTA LTR MaLR 1 428 0 219 286 0 32 chr2 7911992 7912055 -242775799 + MIR SINE MIR 196 256 -6 363 284 17 57 chr2 7913152 7913306 -242774548 - MIR SINE MIR -14 248 100 2225 143 59 7 chr2 7913306 7913713 -242774141 + MSTA LTR MaLR 1 428 0 363 284 17 57 chr2 7913713 7913734 -242774120 - MIR SINE MIR -162 100 80 465 168 184 0 chr2 7914912 7915037 -242772817 + LTR16C LTR ERVL 228 375 -116 1108 211 81 88 chr2 7915085 7915178 -242772676 + MLT1C LTR MaLR 16 108 -359 2400 85 48 20 chr2 7915178 7915532 -242772322 - THE1B LTR MaLR 0 364 1 1108 211 81 88 chr2 7915532 7915883 -242771971 + MLT1C LTR MaLR 108 457 -10 409 175 97 35 chr2 7915892 7916006 -242771848 + LTR16C LTR ERVL 371 491 0 233 306 28 0 chr2 7916602 7916674 -242771180 + MIR3 SINE MIR 112 185 -23 191 333 76 49 chr2 7916717 7916861 -242770993 + MIR SINE MIR 109 256 -6 1159 201 30 91 chr2 7917552 7917950 -242769904 - MLT1A2 LTR MaLR 0 374 1 191 286 107 27 chr2 7918129 7918241 -242769613 - MIR SINE MIR -33 229 109 2222 123 3 0 chr2 7918252 7918552 -242769302 + AluSx SINE Alu 1 301 -11 468 353 105 0 chr2 7919405 7919595 -242768259 + MIR SINE MIR 53 262 0 235 264 132 9 chr2 7920174 7920280 -242767574 - MIR SINE MIR -65 197 79 218 81 27 0 chr2 7921018 7921055 -242766799 + (TCC)n Simple_repeat Simple_repeat 1 38 0 255 303 84 21 chr2 7921382 7921524 -242766330 + MIR SINE MIR 77 227 -35 187 328 17 0 chr2 7921844 7921902 -242765952 + L2 LINE L2 3245 3303 -10 313 236 0 0 chr2 7921918 7921990 -242765864 - MIR SINE MIR -138 124 53 487 246 46 130 chr2 7922339 7922419 -242765435 - MIR SINE MIR -2 260 175 1978 130 7 3 chr2 7922419 7922704 -242765150 + AluSx SINE Alu 6 291 -21 225 0 0 0 chr2 7922704 7922729 -242765125 + (TA)n Simple_repeat Simple_repeat 2 26 0 487 246 46 130 chr2 7922729 7922931 -242764923 - MIR SINE MIR -85 177 1 475 290 12 25 chr2 7923772 7923934 -242763920 - MER63 DNA MER1_type -276 786 1 201 133 0 0 chr2 7924178 7924208 -242763646 + MIR SINE MIR 117 146 -62 304 123 18 18 chr2 7925190 7925247 -242762607 + LTR33A LTR ERVL 447 503 -20 284 260 39 13 chr2 7926741 7926818 -242761036 + LTR67 LTR ERVL 99 177 -380 664 284 46 15 chr2 7926945 7927206 -242760648 + MLT1L LTR MaLR 347 615 0 312 343 84 17 chr2 7927234 7927412 -242760442 - L1MC4a LINE L1 -1878 5930 5741 422 261 92 15 chr2 7928583 7928713 -242759141 - MIR3 SINE MIR -16 192 53 419 308 39 19 chr2 7928737 7928893 -242758961 - MIR SINE MIR -70 192 34 2504 198 98 100 chr2 7929088 7929142 -242758712 + L1MC3 LINE L1 6840 6893 -892 1684 154 0 27 chr2 7929142 7929448 -242758406 + AluJo SINE Alu 14 299 -13 2504 198 98 100 chr2 7929448 7929662 -242758192 + L1MC3 LINE L1 6893 7106 -679 282 200 0 17 chr2 7929662 7929722 -242758132 + MLT1C LTR MaLR 50 108 -459 2504 198 98 100 chr2 7929722 7930328 -242757526 + L1MC3 LINE L1 7106 7784 -1 411 314 59 12 chr2 7930365 7930534 -242757320 + MER5B DNA MER1_type 2 178 0 213 161 286 0 chr2 7931551 7931607 -242756247 - MIR SINE MIR -121 141 70 453 158 0 0 chr2 7931844 7931920 -242755934 + L1MB3 LINE L1 6101 6176 -7 380 123 14 0 chr2 7933653 7933726 -242754128 + (CA)n Simple_repeat Simple_repeat 1 74 0 192 270 139 74 chr2 7934676 7934891 -242752963 + L2 LINE L2 2437 2665 -649 431 228 18 78 chr2 7935254 7935421 -242752433 + MIR SINE MIR 96 252 -10 2238 113 0 0 chr2 7935615 7935916 -242751938 - AluSq SINE Alu -8 305 5 235 308 0 0 chr2 7936399 7936575 -242751279 + GA-rich Low_complexity Low_complexity 1 176 0 2899 206 113 10 chr2 7936591 7937305 -242750549 + Charlie1a DNA MER1_type 109 896 -559 289 179 0 36 chr2 7937787 7937871 -242749983 - L1MA7 LINE L1 -147 6144 6064 850 105 15 0 chr2 7937871 7937997 -242749857 + L1MA7 LINE L1 6157 6291 0 733 220 77 0 chr2 7938372 7938554 -242749300 + MLT1C LTR MaLR 270 465 -2 406 293 0 0 chr2 7938568 7938667 -242749187 - MIR SINE MIR -107 155 57 255 301 221 15 chr2 7938912 7939111 -242748743 + MIR SINE MIR 22 261 -1 180 380 60 0 chr2 7940896 7940996 -242746858 - MIR SINE MIR -59 203 98 299 309 131 36 chr2 7941130 7941382 -242746472 - L3b LINE CR1 -164 1419 1144 236 306 13 19 chr2 7943411 7943568 -242744286 + CT-rich Low_complexity Low_complexity 2 157 0 250 311 68 0 chr2 7945914 7946017 -242741837 - L2 LINE L2 -214 3058 2949 195 152 0 0 chr2 7946492 7946525 -242741329 - MIR SINE MIR -117 145 113 181 277 15 0 chr2 7947587 7947652 -242740202 + L2 LINE L2 2703 2768 -546 495 243 97 5 chr2 7947666 7947851 -242740003 - MIR SINE MIR -15 247 46 348 254 107 57 chr2 7949642 7949819 -242738035 - MIR SINE MIR -55 207 22 363 195 13 0 chr2 7950952 7951029 -242736825 + MIR SINE MIR 66 143 -119 548 208 104 69 chr2 7951582 7951755 -242736099 + MER63A DNA MER1_type 3 181 -29 456 221 82 76 chr2 7951893 7952051 -242735803 + MIR SINE MIR 17 175 -87 304 346 121 27 chr2 7952131 7953107 -242734747 + L2 LINE L2 1675 2742 -572 411 258 93 7 chr2 7953551 7953702 -242734152 - MER20B DNA MER1_type -604 179 16 338 273 99 16 chr2 7953710 7953831 -242734023 + L2 LINE L2 3142 3272 0 2071 158 92 8 chr2 7954778 7955171 -242732683 + MSTB LTR MaLR 1 426 0 916 278 14 0 chr2 7955365 7955588 -242732266 - MIR SINE MIR -25 237 12 860 273 96 35 chr2 7955603 7956095 -242731759 - MLT1F1 LTR MaLR 0 567 1 3689 217 30 30 chr2 7958044 7958274 -242729580 - Charlie1 DNA MER1_type 0 2761 2532 2246 101 0 3 chr2 7958274 7958582 -242729272 - AluSx SINE Alu -1 311 5 3689 217 30 30 chr2 7958582 7959296 -242728558 - Charlie1 DNA MER1_type -228 2533 1817 397 253 37 34 chr2 7959808 7959958 -242727896 + MIR3 SINE MIR 21 172 -36 2446 208 50 11 chr2 7960275 7960833 -242727021 + MLT1G LTR MaLR 11 590 0 574 321 102 56 chr2 7960849 7961838 -242726016 + L1ME2 LINE L1 4954 7750 -211 322 269 21 78 chr2 7962179 7962320 -242725534 + MER69A DNA AcHobo 28 160 -17 1770 271 39 58 chr2 7962992 7963711 -242724143 + L1M3c LINE L1 1 705 -5436 646 207 8 32 chr2 7963707 7963945 -242723909 + L1M3c LINE L1 1341 1661 -4550 * 464 177 0 0 chr2 7963946 7964025 -242723829 - Tigger5 DNA MER2_type 0 2323 2245 * 1212 211 4 22 chr2 7964019 7964251 -242723603 - Tigger5 DNA MER2_type -2095 228 1 1541 263 99 9 chr2 7964256 7964665 -242723189 + L1M4c LINE L1 1436 1807 -4575 1988 125 0 0 chr2 7964665 7964978 -242722876 - AluSg SINE Alu 0 313 1 1541 263 99 9 chr2 7964978 7965747 -242722107 + L1M4c LINE L1 1807 2760 -3622 1564 104 5 0 chr2 7965747 7965959 -242721895 - AluSq SINE Alu -19 294 82 1541 263 99 9 chr2 7965959 7966078 -242721776 + L1M4c LINE L1 2760 2867 -3515 1946 167 48 17 chr2 7966078 7966285 -242721569 + L1MA9 LINE L1 5105 5304 -1008 7833 21 0 0 chr2 7966285 7967205 -242720649 - L1PA4 LINE L1 -11 6144 5224 1946 167 48 17 chr2 7967205 7967789 -242720065 + L1MA9 LINE L1 5304 6136 -176 1946 139 52 12 chr2 7967789 7968134 -242719720 + L1MA9 LINE L1 5954 6312 0 1946 167 48 17 chr2 7968134 7968317 -242719537 + L1MA9 LINE L1 6136 6312 0 2268 84 0 7 chr2 7968416 7968714 -242719140 - AluY SINE Alu -15 296 1 594 264 6 12 chr2 7968739 7968902 -242718952 + L1MA10 LINE L1 6159 6320 -14 626 315 56 24 chr2 7970025 7970435 -242717419 + L1ME4a LINE L1 5699 6121 0 220 315 33 22 chr2 7972675 7972767 -242715087 - MIR SINE MIR -82 180 88 385 210 217 7 chr2 7972994 7973137 -242714717 - MER5A DNA MER1_type -10 179 7 224 346 13 0 chr2 7973358 7973436 -242714418 + L2 LINE L2 3227 3305 -8 1964 192 32 24 chr2 7973731 7974142 -242713712 + MLT2D LTR ERVL 1 414 0 210 233 0 0 chr2 7974493 7974553 -242713301 + GA-rich Low_complexity Low_complexity 2 61 0 307 70 0 0 chr2 7976708 7976751 -242711103 - AluSp/q SINE Alu -8 295 253 205 286 223 0 chr2 7977203 7977315 -242710539 + L2 LINE L2 3136 3272 0 289 250 0 0 chr2 7977512 7977572 -242710282 + L2 LINE L2 2999 3058 -214 194 207 17 0 chr2 7977699 7977757 -242710097 + (CA)n Simple_repeat Simple_repeat 1 59 0 184 319 28 14 chr2 7977961 7978033 -242709821 - MIR SINE MIR -169 93 21 556 281 22 43 chr2 7978246 7978431 -242709423 + MIR SINE MIR 23 203 -59 331 284 99 23 chr2 7978496 7978673 -242709181 - MIR SINE MIR -28 234 43 293 235 113 17 chr2 7979428 7979543 -242708311 - MIR3 SINE MIR -78 130 5 429 242 32 20 chr2 7981255 7981600 -242706254 + (CA)n Simple_repeat Simple_repeat 1 349 0 373 274 0 11 chr2 7981895 7981990 -242705864 + MIR SINE MIR 58 151 -57 380 325 29 10 chr2 7982384 7982590 -242705264 - L1MC4a LINE L1 -1929 5879 5670 269 324 58 29 chr2 7982923 7983096 -242704758 + MIR SINE MIR 33 210 -52 297 190 113 64 chr2 7983662 7983802 -242704052 + MIR SINE MIR 41 192 -68 387 274 46 4 chr2 7985263 7985422 -242702432 - MIR3 SINE MIR 0 262 51 424 239 8 51 chr2 7985433 7985550 -242702304 + L2 LINE L2 3201 3312 -1 293 315 46 39 chr2 7987198 7987328 -242700526 + MIR3 SINE MIR 78 208 0 202 307 0 45 chr2 7988464 7988552 -242699302 - L2 LINE L2 -10 3262 3179 486 289 13 33 chr2 7989851 7990003 -242697851 + MIR SINE MIR 28 176 -86 615 259 7 0 chr2 7990079 7990214 -242697640 + MIR SINE MIR 16 151 -111 427 209 51 82 chr2 7990215 7990373 -242697481 + L1MB4 LINE L1 6022 6174 -6 338 232 11 11 chr2 7990364 7990459 -242697395 + L1MB8 LINE L1 6078 6172 -6 * 373 256 0 60 chr2 7990473 7990606 -242697248 + MIR SINE MIR 137 261 -1 377 349 23 11 chr2 7990619 7990721 -242697133 - MIR SINE MIR -60 202 96 2268 47 34 24 chr2 7990721 7991018 -242696836 - AluY SINE Alu -11 300 1 377 349 23 11 chr2 7991018 7991090 -242696764 - MIR SINE MIR -166 96 26 235 280 178 0 chr2 7993137 7993244 -242694610 - MIR SINE MIR -91 171 46 340 319 60 0 chr2 7993635 7993751 -242694103 - MIR SINE MIR -111 151 29 2233 97 7 0 chr2 7994357 7994655 -242693199 + AluSc SINE Alu 1 300 -9 189 192 14 27 chr2 7994689 7994762 -242693092 + (TA)n Simple_repeat Simple_repeat 1 72 0 242 137 59 0 chr2 7994776 7994827 -242693027 + G-rich Low_complexity Low_complexity 3 56 0 769 97 0 82 chr2 7994828 7995024 -242692830 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 378 123 66 8 chr2 7995134 7995256 -242692598 + (TG)n Simple_repeat Simple_repeat 1 129 0 203 149 0 21 chr2 7995310 7995357 -242692497 + (TG)n Simple_repeat Simple_repeat 1 46 0 215 305 48 9 chr2 7995750 7995855 -242691999 + MIR SINE MIR 20 128 -134 2212 114 0 0 chr2 7996312 7996618 -242691236 + AluSx SINE Alu 1 306 -6 237 346 31 8 chr2 7998996 7999126 -242688728 + L1ME4a LINE L1 5518 5650 -2158 2581 122 32 30 chr2 7999127 7999562 -242688292 + L1PA10 LINE L1 5732 6167 -1 317 360 48 0 chr2 7999563 7999688 -242688166 + L1ME4a LINE L1 5726 5856 -265 393 250 92 0 chr2 7999928 8000124 -242687730 + L1ME4a LINE L1 5728 5941 -180 24 67 0 0 chr2 8000124 8000169 -242687685 + AT_rich Low_complexity Low_complexity 1 45 0 1887 188 37 39 chr2 8000238 8000843 -242687011 + L1MB7 LINE L1 5015 5674 -510 2477 191 23 29 chr2 8001294 8001381 -242686473 + L1MB7 LINE L1 5652 5738 -446 1967 133 3 7 chr2 8001381 8001690 -242686164 + AluSx SINE Alu 1 308 -4 2477 191 23 29 chr2 8001690 8002119 -242685735 + L1MB7 LINE L1 5738 6165 -19 6105 147 78 31 chr2 8002142 8002474 -242685380 + Tigger3b DNA MER2_type 1 316 -2712 2234 94 0 0 chr2 8002474 8002773 -242685081 - AluSx SINE Alu -13 299 1 6105 147 78 31 chr2 8002773 8003283 -242684571 + Tigger3b DNA MER2_type 316 917 -2111 236 30 30 0 chr2 8003283 8003316 -242684538 + (CTCA)n Simple_repeat Simple_repeat 1 34 0 6105 147 78 31 chr2 8003316 8003646 -242684208 + Tigger3b DNA MER2_type 917 1230 -1 283 352 28 28 chr2 8004609 8004754 -242683100 - L3 LINE CR1 -198 1379 1235 290 301 60 15 chr2 8005246 8005379 -242682475 + MIR3 SINE MIR 58 196 -12 278 311 73 34 chr2 8006505 8006617 -242681237 - MIR SINE MIR -57 205 82 1157 254 88 31 chr2 8006617 8006971 -242680883 - MLT1A2 LTR MaLR 0 374 1 278 311 73 34 chr2 8006971 8007035 -242680819 - MIR SINE MIR -180 82 22 395 36 36 0 chr2 8007036 8007092 -242680762 + (CTACT)n Simple_repeat Simple_repeat 4 61 0 187 339 71 24 chr2 8008451 8008578 -242679276 - MIR SINE MIR -27 235 103 2610 113 6 6 chr2 8008587 8008951 -242678903 - THE1B LTR MaLR 0 364 1 250 307 39 31 chr2 8009786 8009913 -242677941 - MIR3 SINE MIR -16 192 65 1810 189 16 18 chr2 8009942 8010120 -242677734 + MLT1B LTR MaLR 1 178 -212 1627 192 0 26 chr2 8010120 8010432 -242677422 + AluJb SINE Alu 1 304 -8 1810 189 16 18 chr2 8010432 8010634 -242677220 + MLT1B LTR MaLR 178 380 -10 2172 109 0 7 chr2 8011048 8011350 -242676504 - AluSq SINE Alu -13 300 1 542 292 120 5 chr2 8011540 8011749 -242676105 + MIR SINE MIR 5 237 -25 559 266 67 37 chr2 8012339 8012665 -242675189 + MLT1J2 LTR MaLR 64 403 -6 184 219 205 26 chr2 8013003 8013154 -242674700 - L2 LINE L2 -1224 2090 1913 283 342 37 62 chr2 8015804 8015905 -242671949 + HAL1 LINE L1 8 110 -2397 779 228 59 30 chr2 8015905 8016107 -242671747 - MER3 DNA MER1_type -1 208 1 283 342 37 62 chr2 8016107 8016248 -242671606 + HAL1 LINE L1 110 244 -2263 299 312 23 69 chr2 8016251 8016424 -242671430 - MER115 DNA AcHobo -4 689 525 1205 216 24 80 chr2 8016426 8016838 -242671016 - MLT1B LTR MaLR 0 390 2 1055 251 129 34 chr2 8016840 8017219 -242670635 - MER115 DNA AcHobo -168 525 111 229 341 12 0 chr2 8017284 8017369 -242670485 + HAL1 LINE L1 235 320 -2187 1946 267 66 22 chr2 8017399 8017983 -242669871 + HAL1 LINE L1 418 974 -1533 252 0 0 0 chr2 8017983 8018011 -242669843 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1946 267 66 22 chr2 8018011 8018655 -242669199 + HAL1 LINE L1 974 1739 -768 447 35 0 0 chr2 8018741 8018798 -242669056 + (TG)n Simple_repeat Simple_repeat 2 58 0 287 167 0 0 chr2 8018812 8018854 -242669000 - MER41B-int LTR ERV1 -5904 42 1 962 105 13 7 chr2 8018854 8019007 -242668847 - MER41B LTR ERV1 0 635 482 1741 108 105 21 chr2 8019544 8019830 -242668024 + AluSx SINE Alu 3 312 0 208 369 35 35 chr2 8020062 8020203 -242667651 - MIR3 SINE MIR -16 192 52 289 250 117 17 chr2 8020331 8020451 -242667403 + L2 LINE L2 1303 1434 -1880 321 47 0 0 chr2 8020657 8020700 -242667154 + (CA)n Simple_repeat Simple_repeat 2 44 0 324 261 82 89 chr2 8021206 8021486 -242666368 + L2 LINE L2 2839 3116 -156 337 282 85 82 chr2 8023154 8023448 -242664406 - L2 LINE L2 -108 3205 2911 274 209 14 0 chr2 8024538 8024677 -242663177 + (TG)n Simple_repeat Simple_repeat 1 141 0 319 165 0 21 chr2 8024744 8024841 -242663013 + (TG)n Simple_repeat Simple_repeat 1 95 0 237 65 0 0 chr2 8024842 8024873 -242662981 + (GGGAGA)n Simple_repeat Simple_repeat 3 33 0 914 160 0 41 chr2 8026733 8026902 -242660952 + AluJb SINE Alu 135 296 -16 448 292 39 28 chr2 8027433 8027588 -242660266 + MIR SINE MIR 15 171 -57 1107 160 62 29 chr2 8029807 8030153 -242657701 - MLT1D LTR MaLR -103 402 1 274 261 23 11 chr2 8031256 8031344 -242656510 + MIR SINE MIR 58 146 -116 1301 218 92 23 chr2 8032561 8032997 -242654857 - MLT1C LTR MaLR 0 467 2 1947 160 7 0 chr2 8033240 8033533 -242654321 - AluJo SINE Alu -17 295 1 26 64 0 0 chr2 8033593 8033640 -242654214 + AT_rich Low_complexity Low_complexity 1 47 0 359 302 39 23 chr2 8033758 8033972 -242653882 + MIR SINE MIR 5 228 -34 226 165 92 0 chr2 8035472 8035581 -242652273 + (TA)n Simple_repeat Simple_repeat 2 120 0 436 213 24 6 chr2 8035584 8035753 -242652101 + GA-rich Low_complexity Low_complexity 1 172 0 1232 155 24 0 chr2 8038624 8038837 -242649017 + MER20 DNA MER1_type 1 218 -1 509 138 0 0 chr2 8041680 8041760 -242646094 - MLT2B1 LTR ERVL -440 80 1 324 247 21 21 chr2 8042018 8042111 -242645743 + MER115 DNA AcHobo 7 99 -594 1807 184 49 16 chr2 8042130 8042499 -242645355 + MLT1B LTR MaLR 2 382 -8 552 278 108 0 chr2 8042522 8042734 -242645120 + MER115 DNA AcHobo 132 366 -327 22 0 0 0 chr2 8043355 8043377 -242644477 + GC_rich Low_complexity Low_complexity 1 22 0 948 217 27 5 chr2 8043791 8044012 -242643842 + MER52C-int LTR ERV1 2501 2726 -2491 675 201 28 14 chr2 8044058 8044202 -242643652 + MER52C-int LTR ERV1 4545 4690 -1256 293 119 0 0 chr2 8044207 8044249 -242643605 + MER52C-int LTR ERV1 5976 6017 -1188 453 107 57 4 chr2 8044253 8044391 -242643463 + MER52C-int LTR ERV1 6892 7091 0 3560 187 171 19 chr2 8044934 8045865 -242641989 + MER52C LTR ERV1 49 1278 0 233 260 110 0 chr2 8046315 8046415 -242641439 + MLT1H1 LTR MaLR 30 140 -415 282 191 51 6 chr2 8046994 8047151 -242640703 + (TA)n Simple_repeat Simple_repeat 2 165 0 321 287 25 57 chr2 8047182 8047304 -242640550 + L1MC4 LINE L1 6586 6703 -1339 318 261 23 23 chr2 8047306 8047394 -242640460 + L1MCa LINE L1 1980 2067 -4359 186 200 42 21 chr2 8047394 8047489 -242640365 + (TA)n Simple_repeat Simple_repeat 1 97 0 327 318 24 0 chr2 8047494 8047579 -242640275 - L1MC4 LINE L1 -1340 6702 6616 306 315 0 22 chr2 8047612 8047704 -242640150 + L1MC4 LINE L1 6614 6703 -1339 220 221 16 49 chr2 8047704 8047826 -242640028 + (TATATG)n Simple_repeat Simple_repeat 6 123 0 304 253 69 35 chr2 8047826 8047913 -242639941 - L1MC4 LINE L1 -1339 6703 6614 240 209 60 0 chr2 8047914 8047981 -242639873 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 216 0 0 0 chr2 8047981 8048005 -242639849 + (CA)n Simple_repeat Simple_repeat 1 24 0 646 163 42 95 chr2 8049075 8049219 -242638635 + MER96B DNA MER1_type? 1 134 -283 2773 115 29 2 chr2 8049219 8049663 -242638191 + L1PA16 LINE L1 5708 6163 -3 646 163 42 95 chr2 8049663 8049708 -242638146 + MER96B DNA MER1_type? 134 180 -237 1647 163 54 76 chr2 8049816 8050028 -242637826 - MSTB1 LTR MaLR 0 432 232 1970 157 3 0 chr2 8050028 8050328 -242637526 + AluJb SINE Alu 2 302 -10 1647 163 54 76 chr2 8050328 8050525 -242637329 - MSTB1 LTR MaLR -200 232 32 198 306 0 47 chr2 8052180 8052265 -242635589 + MIR SINE MIR 148 228 -34 1796 176 14 3 chr2 8052360 8052650 -242635204 + AluJo SINE Alu 1 293 -19 188 258 113 41 chr2 8052969 8053066 -242634788 - L3 LINE CR1 -106 1471 1368 1781 145 7 56 chr2 8054424 8054727 -242633127 + AluJo SINE Alu 1 288 -24 236 221 81 23 chr2 8054868 8054954 -242632900 - L2 LINE L2 0 3313 3223 207 69 0 0 chr2 8055003 8055032 -242632822 + (CCCCCA)n Simple_repeat Simple_repeat 4 32 0 629 197 55 0 chr2 8056339 8056466 -242631388 + FRAM SINE Alu 21 154 -22 183 350 57 0 chr2 8057578 8057701 -242630153 - MER5A DNA MER1_type -35 154 25 208 321 97 42 chr2 8057891 8058128 -242629726 - L2 LINE L2 -195 3077 2828 2426 82 0 0 chr2 8058457 8058749 -242629105 - AluSg SINE Alu -18 292 1 982 144 0 0 chr2 8059969 8060115 -242627739 - AluSg/x SINE Alu -8 302 157 225 296 12 25 chr2 8061060 8061141 -242626713 - MER5A DNA MER1_type 0 189 110 2014 117 23 47 chr2 8061142 8061526 -242626328 - THE1C LTR MaLR 0 375 1 190 291 46 106 chr2 8061557 8061708 -242626146 - MER5A DNA MER1_type -1 188 47 922 161 0 13 chr2 8062261 8062416 -242625438 + FRAM SINE Alu 24 176 0 2406 69 0 23 chr2 8062728 8063033 -242624821 + AluY SINE Alu 1 298 -13 1508 115 28 45 chr2 8063312 8063555 -242624299 + L1MB3 LINE L1 5892 6138 -45 1800 101 97 4 chr2 8063555 8063813 -242624041 + AluSg SINE Alu 1 282 -28 279 0 0 0 chr2 8063813 8063844 -242624010 + (CA)n Simple_repeat Simple_repeat 2 32 0 1508 115 28 45 chr2 8063844 8063887 -242623967 + L1MB3 LINE L1 6136 6174 -9 471 286 101 45 chr2 8064666 8065137 -242622717 - L1ME3A LINE L1 -217 5953 5450 1059 306 66 21 chr2 8065233 8065700 -242622154 + L2 LINE L2 2826 3313 0 1050 167 5 5 chr2 8065703 8066368 -242621486 + (TGGA)n Simple_repeat Simple_repeat 1 665 0 514 193 17 25 chr2 8067091 8067210 -242620644 + MLT1J1 LTR MaLR 3 120 -326 819 148 11 82 chr2 8067211 8067394 -242620460 + MER20 DNA MER1_type 1 170 -49 559 295 122 24 chr2 8067510 8067805 -242620049 + MLT1J2 LTR MaLR 113 436 -14 259 180 110 70 chr2 8068303 8068403 -242619451 - MER53 DNA DNA -84 105 2 329 273 123 27 chr2 8068405 8068592 -242619262 - MIR SINE MIR -13 249 45 277 376 23 23 chr2 8068932 8069105 -242618749 + MIR SINE MIR 18 190 -72 2005 145 16 10 chr2 8070008 8070139 -242617715 + AluJb SINE Alu 1 130 -182 1909 158 14 3 chr2 8070139 8070431 -242617423 + AluJb SINE Alu 1 295 -17 2005 145 16 10 chr2 8070431 8070602 -242617252 + AluJb SINE Alu 130 305 -7 332 248 101 48 chr2 8070889 8071083 -242616771 - MLT1G LTR MaLR -175 420 216 4144 189 81 69 chr2 8071085 8072631 -242615223 + L1MDa LINE L1 324 2126 -4414 1562 125 21 127 chr2 8072663 8073040 -242614814 + MER1B DNA MER1_type 1 337 0 441 249 71 24 chr2 8073157 8073326 -242614528 + MER5A DNA MER1_type 7 183 -6 232 309 0 64 chr2 8076397 8076507 -242611347 + C-rich Low_complexity Low_complexity 3 105 0 267 31 0 0 chr2 8076761 8076793 -242611061 + (CCG)n Simple_repeat Simple_repeat 2 33 0 399 297 0 14 chr2 8079428 8079573 -242608281 + C-rich Low_complexity Low_complexity 2 144 0 225 0 0 0 chr2 8080525 8080550 -242607304 + (A)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr2 8081881 8081904 -242605950 + AT_rich Low_complexity Low_complexity 1 23 0 529 243 101 106 chr2 8084118 8084622 -242603232 - L1 LINE L1 -1995 4151 3639 1897 121 29 0 chr2 8085093 8085373 -242602481 + AluJb SINE Alu 1 288 -24 26 30 0 0 chr2 8085374 8085407 -242602447 + AT_rich Low_complexity Low_complexity 1 33 0 1620 308 67 40 chr2 8085492 8086471 -242601383 + L1MEd LINE L1 112 1117 -5002 1747 134 10 23 chr2 8086605 8086904 -242600950 - AluJb SINE Alu -17 295 1 1965 277 71 13 chr2 8086916 8087664 -242600190 + L1MC4a LINE L1 5279 6069 -1739 1641 143 3 28 chr2 8087804 8088090 -242599764 + AluSx SINE Alu 1 279 -33 322 281 45 0 chr2 8088105 8088194 -242599660 - L1MC5 LINE L1 -861 7100 7008 961 290 86 28 chr2 8088292 8088836 -242599018 + L1MC4a LINE L1 6199 6774 -1034 333 259 46 15 chr2 8088864 8088995 -242598859 + L1MC5 LINE L1 6957 7091 -870 302 319 91 55 chr2 8089228 8089535 -242598319 + L1MC5 LINE L1 7249 7566 -395 243 0 0 0 chr2 8089549 8089576 -242598278 + (T)n Simple_repeat Simple_repeat 1 27 0 269 224 10 71 chr2 8089655 8089753 -242598101 + L1MC5 LINE L1 7711 7802 -159 359 309 95 8 chr2 8090907 8091033 -242596821 - L2 LINE L2 0 3272 3136 397 237 200 4 chr2 8091413 8091658 -242596196 + LTR50 LTR ERVL 502 794 -1 405 300 0 0 chr2 8091799 8091959 -242595895 + G-rich Low_complexity Low_complexity 1 160 0 315 142 122 0 chr2 8092060 8092208 -242595646 + (GGATG)n Simple_repeat Simple_repeat 2 167 0 311 164 41 0 chr2 8092211 8092284 -242595570 + GA-rich Low_complexity Low_complexity 1 76 0 1903 138 0 0 chr2 8092762 8093079 -242594775 + AluSx SINE Alu 1 317 0 694 301 109 12 chr2 8093402 8093731 -242594123 - L1MC/D LINE L1 -2073 5735 5375 222 62 0 0 chr2 8093745 8093777 -242594077 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 273 237 30 69 chr2 8094226 8094357 -242593497 - L1MC4a LINE L1 -1634 6174 6049 768 197 72 0 chr2 8094407 8094559 -242593295 + AluJb SINE Alu 136 298 -14 210 304 124 19 chr2 8094711 8094872 -242592982 + L3 LINE CR1 1320 1497 -80 1506 108 0 0 chr2 8095516 8095719 -242592135 + AluSx SINE Alu 1 203 -109 1087 172 10 25 chr2 8095720 8095924 -242591930 + MLT1B LTR MaLR 189 389 -1 237 65 0 0 chr2 8096087 8096118 -242591736 + (CA)n Simple_repeat Simple_repeat 1 31 0 22 56 0 0 chr2 8096975 8097011 -242590843 + AT_rich Low_complexity Low_complexity 1 36 0 328 104 30 0 chr2 8098950 8099017 -242588837 + (TG)n Simple_repeat Simple_repeat 1 69 0 328 128 46 18 chr2 8099064 8099173 -242588681 + (TG)n Simple_repeat Simple_repeat 1 112 0 436 122 68 7 chr2 8099200 8099347 -242588507 + (TG)n Simple_repeat Simple_repeat 1 156 0 336 278 61 26 chr2 8099547 8099662 -242588192 - L2 LINE L2 -474 2840 2722 534 113 0 0 chr2 8099869 8099949 -242587905 + MADE1 DNA Mariner 1 80 0 1881 113 72 0 chr2 8100359 8100650 -242587204 - AluSx SINE Alu 0 312 1 2269 97 3 0 chr2 8100930 8101238 -242586616 + AluSp SINE Alu 1 309 -4 1651 148 56 14 chr2 8101306 8101590 -242586264 + AluJo SINE Alu 1 296 -16 1587 223 122 26 chr2 8102248 8102709 -242585145 + MLT1D LTR MaLR 1 505 0 1584 195 127 3 chr2 8103131 8103286 -242584568 - MSTD LTR MaLR -2 394 260 2204 113 159 5 chr2 8103286 8103657 -242584197 + MSTA LTR MaLR 1 428 0 1584 195 127 3 chr2 8103657 8103839 -242584015 - MSTD LTR MaLR -136 260 15 358 283 30 0 chr2 8103886 8103985 -242583869 + L2 LINE L2 3212 3313 0 274 316 29 76 chr2 8103985 8104156 -242583698 + L3 LINE CR1 1404 1566 -11 450 0 0 0 chr2 8104591 8104641 -242583213 + (TG)n Simple_repeat Simple_repeat 2 51 0 572 129 0 86 chr2 8104655 8104771 -242583083 - AluJ SINE Alu 0 312 207 927 136 0 7 chr2 8104771 8104911 -242582943 - AluJ SINE Alu -169 143 5 436 174 250 45 chr2 8104920 8105052 -242582802 - MLT1F LTR MaLR -383 159 1 216 176 44 0 chr2 8105671 8105739 -242582115 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 2173 53 0 0 chr2 8105832 8106097 -242581757 - AluY SINE Alu -16 295 31 395 271 68 23 chr2 8107540 8107671 -242580183 + MLT1G3 LTR MaLR 26 162 -433 1678 148 5 77 chr2 8107671 8108043 -242579811 - MER4A LTR ERV1 0 664 261 640 128 20 10 chr2 8108040 8108142 -242579712 - MER4A LTR ERV1 -561 103 1 * 561 266 80 73 chr2 8108154 8108572 -242579282 + MLT1G3 LTR MaLR 92 560 -7 1987 204 99 159 chr2 8108620 8108697 -242579157 - Charlie2a DNA MER1_type -6 2856 2776 5096 84 0 15 chr2 8108697 8109367 -242578487 - PABL_A LTR ERV1 0 660 1 1987 204 99 159 chr2 8109367 8110569 -242577285 - Charlie2a DNA MER1_type -86 2776 1673 1939 122 6 34 chr2 8110569 8110889 -242576965 + AluSx SINE Alu 1 311 -1 1987 204 99 159 chr2 8110889 8111066 -242576788 - Charlie2a DNA MER1_type -1189 1673 1487 460 282 222 0 chr2 8111189 8111405 -242576449 - Charlie2a DNA MER1_type -2239 623 360 896 301 132 36 chr2 8111826 8112654 -242575200 - HAL1 LINE L1 0 2507 1601 2549 171 11 18 chr2 8112673 8113128 -242574726 + LOR1b LTR ERV1 10 461 0 2126 265 85 75 chr2 8113129 8113248 -242574606 - HAL1 LINE L1 -913 1594 1478 2007 123 0 3 chr2 8113248 8113563 -242574291 - AluSx SINE Alu 0 314 1 2126 265 85 75 chr2 8113563 8114932 -242572922 - HAL1 LINE L1 -1029 1478 90 415 256 76 33 chr2 8117713 8117924 -242569930 + L1ME3A LINE L1 5727 5946 -224 2316 65 3 0 chr2 8117939 8118230 -242569624 + AluSg SINE Alu 5 296 -14 2374 116 42 11 chr2 8118289 8118642 -242569212 + THE1B LTR MaLR 1 364 0 2019 105 0 36 chr2 8118698 8119002 -242568852 - AluSx SINE Alu -19 293 1 1498 244 31 0 chr2 8119089 8119449 -242568405 - ERVL LTR ERVL -4525 1239 869 1374 241 26 42 chr2 8119545 8119969 -242567885 - MLT2B1 LTR ERVL -103 417 1 1658 156 42 10 chr2 8120054 8120343 -242567511 + AluJo SINE Alu 1 298 -14 23 54 0 0 chr2 8120742 8120779 -242567075 + AT_rich Low_complexity Low_complexity 1 37 0 2637 101 11 16 chr2 8121008 8121385 -242566469 + THE1C LTR MaLR 1 375 0 993 226 68 87 chr2 8121874 8122289 -242565565 - L1M4 LINE L1 -1022 5124 4718 36 40 0 0 chr2 8122390 8122440 -242565414 + AT_rich Low_complexity Low_complexity 1 50 0 295 250 24 12 chr2 8122541 8122625 -242565229 + L2 LINE L2 1471 1555 -1759 2671 170 19 46 chr2 8122703 8123187 -242564667 + MLT2B2 LTR ERVL 1 472 -43 201 74 0 0 chr2 8123187 8123214 -242564640 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2671 170 19 46 chr2 8123214 8123246 -242564608 + MLT2B2 LTR ERVL 472 503 -12 21 57 0 0 chr2 8123337 8123372 -242564482 + AT_rich Low_complexity Low_complexity 1 35 0 1632 168 0 14 chr2 8123378 8123669 -242564185 - AluJo SINE Alu -15 297 11 1109 123 12 0 chr2 8124432 8124602 -242563252 + AluSg/x SINE Alu 135 306 -4 193 329 13 26 chr2 8124773 8124849 -242563005 + MIR3 SINE MIR 125 199 -9 351 44 0 0 chr2 8125307 8125352 -242562502 + (CA)n Simple_repeat Simple_repeat 2 46 0 277 343 73 32 chr2 8125721 8125908 -242561946 + MIR SINE MIR 14 206 -56 * 567 291 35 0 chr2 8125907 8126048 -242561806 + MIR SINE MIR 97 242 -20 24 53 0 0 chr2 8126247 8126285 -242561569 + AT_rich Low_complexity Low_complexity 1 38 0 225 65 0 0 chr2 8126698 8126729 -242561125 + (ATG)n Simple_repeat Simple_repeat 2 32 0 857 226 106 10 chr2 8126822 8127030 -242560824 + MIR SINE MIR 17 244 -18 308 252 92 25 chr2 8127273 8127392 -242560462 - MER104 DNA Tc2 -49 131 5 22 0 0 0 chr2 8127722 8127744 -242560110 + AT_rich Low_complexity Low_complexity 1 22 0 521 176 0 11 chr2 8127866 8127957 -242559897 + FRAM SINE Alu 38 127 -49 403 195 172 94 chr2 8128218 8128474 -242559380 + MLT1J2 LTR MaLR 2 277 -173 293 248 77 3 chr2 8128522 8128621 -242559233 + MLT1J2 LTR MaLR 345 444 -2 876 131 0 8 chr2 8129068 8129198 -242558656 - FLAM_A SINE Alu -4 129 1 1994 119 3 0 chr2 8129377 8129662 -242558192 - AluSx SINE Alu -24 288 3 1773 161 0 17 chr2 8129750 8130048 -242557806 - AluJb SINE Alu -19 293 1 1627 192 77 0 chr2 8131648 8131971 -242555883 - MER7A DNA MER2_type 0 346 1 1645 132 73 11 chr2 8133177 8133481 -242554373 + AluJo SINE Alu 1 312 0 21 0 0 0 chr2 8137111 8137132 -242550722 + AT_rich Low_complexity Low_complexity 1 21 0 800 197 8 0 chr2 8137380 8137512 -242550342 - FLAM_A SINE Alu 0 133 1 246 255 88 74 chr2 8138241 8138457 -242549397 + L2 LINE L2 3030 3248 -65 1134 192 148 36 chr2 8139132 8139491 -242548363 - MER31B LTR ERV1 -43 423 25 24 32 0 0 chr2 8139631 8139662 -242548192 + AT_rich Low_complexity Low_complexity 1 31 0 2177 121 0 3 chr2 8140366 8140673 -242547181 + AluSx SINE Alu 1 306 -6 483 145 38 0 chr2 8143010 8143106 -242544748 - L1MB8 LINE L1 -275 5899 5798 3564 206 75 11 chr2 8143211 8144065 -242543789 + L1MC4a LINE L1 6900 7808 0 1946 128 6 55 chr2 8146402 8146730 -242541124 + AluSx SINE Alu 1 312 0 1064 181 108 23 chr2 8147245 8147505 -242540349 - AluJo SINE Alu -20 292 11 310 239 163 0 chr2 8147845 8147937 -242539917 + L2 LINE L2 3203 3309 -4 238 247 161 0 chr2 8148571 8148664 -242539190 - MIR SINE MIR -76 186 79 217 195 35 23 chr2 8149170 8149257 -242538597 + (TTATA)n Simple_repeat Simple_repeat 5 92 0 1071 269 143 18 chr2 8150018 8150416 -242537438 - L2 LINE L2 -18 3295 2848 3373 135 67 24 chr2 8150759 8151344 -242536510 + MER4B LTR ERV1 1 610 0 459 33 33 0 chr2 8152354 8152414 -242535440 + AluY SINE Alu 2 63 -247 24 32 0 0 chr2 8152515 8152546 -242535308 + AT_rich Low_complexity Low_complexity 1 31 0 264 319 61 25 chr2 8153758 8153921 -242533933 + L2 LINE L2 2905 3073 -240 1778 286 161 21 chr2 8154235 8155263 -242532591 + L2 LINE L2 191 1362 -1952 278 271 84 60 chr2 8156302 8156553 -242531301 - L2 LINE L2 -920 2394 2138 254 309 40 46 chr2 8156553 8156705 -242531149 + L2 LINE L2 3132 3282 -31 182 233 209 23 chr2 8156736 8156865 -242530989 - L2 LINE L2 -1232 2082 1930 220 186 0 93 chr2 8156995 8157092 -242530762 + GA-rich Low_complexity Low_complexity 5 92 0 2288 92 17 0 chr2 8158466 8158758 -242529096 + AluSx SINE Alu 1 297 -15 316 180 0 0 chr2 8159282 8159343 -242528511 - L1ME4a LINE L1 -1 6120 6060 21 0 0 0 chr2 8159394 8159415 -242528439 + AT_rich Low_complexity Low_complexity 1 21 0 2101 141 0 0 chr2 8159415 8159721 -242528133 + AluSx SINE Alu 1 306 -6 1100 169 0 0 chr2 8160252 8160435 -242527419 - AluJb SINE Alu -10 302 120 410 289 86 119 chr2 8160746 8161720 -242526134 + L2 LINE L2 880 1821 -1493 2098 104 0 0 chr2 8161753 8162058 -242525796 + AluSx SINE Alu 5 309 0 209 262 12 83 chr2 8162082 8162166 -242525688 + L2 LINE L2 1938 2015 -1299 892 226 34 26 chr2 8162176 8162410 -242525444 + MER106A DNA MER1_type 1 236 0 490 265 149 16 chr2 8162412 8162733 -242525121 - L1MC5 LINE L1 -99 7862 7499 1671 121 148 4 chr2 8163051 8163307 -242524547 - AluJb SINE Alu -5 297 5 495 353 154 12 chr2 8163386 8163990 -242523864 + L2 LINE L2 2167 2856 -458 344 348 167 30 chr2 8164019 8164324 -242523530 + L2 LINE L2 2926 3272 0 2136 86 17 7 chr2 8165986 8166276 -242521578 + AluSq SINE Alu 1 293 -20 352 43 0 0 chr2 8166460 8166507 -242521347 - AluY SINE Alu -3 297 251 2365 86 0 10 chr2 8166573 8166875 -242520979 - AluSq SINE Alu -14 299 1 231 133 0 0 chr2 8166914 8166959 -242520895 + (T)n Simple_repeat Simple_repeat 1 45 0 198 0 0 0 chr2 8166988 8167010 -242520844 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr2 8168312 8168333 -242519521 + AT_rich Low_complexity Low_complexity 1 21 0 188 132 151 38 chr2 8168764 8168817 -242519037 - MIR SINE MIR -24 238 180 21 0 0 0 chr2 8170913 8170934 -242516920 + AT_rich Low_complexity Low_complexity 1 21 0 2245 80 0 30 chr2 8170939 8171238 -242516616 + AluSg1 SINE Alu 1 290 -19 379 186 46 56 chr2 8171860 8171983 -242515871 + L1ME LINE L1 5479 5595 -571 230 248 113 68 chr2 8171991 8172124 -242515730 + L1MC4 LINE L1 7903 8041 -1 21 0 0 0 chr2 8174080 8174101 -242513753 + AT_rich Low_complexity Low_complexity 1 21 0 1315 172 0 5 chr2 8176044 8176265 -242511589 + AluJb SINE Alu 85 304 -8 447 290 189 64 chr2 8177387 8177638 -242510216 - L2 LINE L2 -337 2977 2759 1902 124 57 0 chr2 8177638 8177921 -242509933 - AluJb SINE Alu -13 299 1 447 290 189 64 chr2 8177921 8178669 -242509185 - L2 LINE L2 -555 2759 1853 25 0 0 0 chr2 8181923 8181948 -242505906 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 8182761 8182784 -242505070 + AT_rich Low_complexity Low_complexity 1 23 0 208 379 32 0 chr2 8183284 8183379 -242504475 - MIR SINE MIR -69 139 42 252 0 0 0 chr2 8184303 8184331 -242503523 + (CA)n Simple_repeat Simple_repeat 2 29 0 971 108 0 0 chr2 8184537 8184667 -242503187 - AluSg/x SINE Alu -4 308 179 292 327 9 47 chr2 8184729 8184836 -242503018 - MIR SINE MIR -82 126 24 1468 163 21 21 chr2 8185368 8185650 -242502204 - AluJo SINE Alu -30 282 1 1838 143 17 24 chr2 8187306 8187600 -242500254 - AluJb SINE Alu -20 292 1 1705 163 0 14 chr2 8188609 8188885 -242498969 - AluJo SINE Alu -40 272 1 257 339 46 9 chr2 8189078 8189187 -242498667 + L2 LINE L2 3190 3302 -11 21 36 0 0 chr2 8189204 8189232 -242498622 + AT_rich Low_complexity Low_complexity 1 28 0 474 312 75 0 chr2 8191045 8191231 -242496623 + MLT1J LTR MaLR 3 202 -309 452 269 35 29 chr2 8191222 8191393 -242496461 + MLT1J LTR MaLR 340 511 0 * 28 0 0 0 chr2 8191570 8191598 -242496256 + AT_rich Low_complexity Low_complexity 1 28 0 223 304 106 43 chr2 8191791 8191952 -242495902 - MIR SINE MIR -46 216 46 818 266 71 9 chr2 8192555 8192781 -242495073 + MIR SINE MIR 23 262 0 244 200 29 29 chr2 8192971 8193041 -242494813 + GA-rich Low_complexity Low_complexity 4 73 0 771 281 154 7 chr2 8193817 8194318 -242493536 - L2 LINE L2 0 3313 2734 25 31 0 0 chr2 8195629 8195661 -242492193 + AT_rich Low_complexity Low_complexity 1 32 0 450 261 69 0 chr2 8195974 8196104 -242491750 - L2 LINE L2 -15 3298 3160 354 282 115 6 chr2 8196143 8196317 -242491537 + L1ME LINE L1 5586 5778 -343 1647 112 0 60 chr2 8196397 8196647 -242491207 + AluSq SINE Alu 1 235 -78 225 0 0 0 chr2 8196654 8196679 -242491175 + (A)n Simple_repeat Simple_repeat 1 25 0 265 155 0 71 chr2 8196718 8196802 -242491052 + L1ME4a LINE L1 6044 6121 0 2966 136 39 0 chr2 8197449 8197965 -242489889 + Tigger4(Zombi) DNA MER2_type 2196 2731 0 2768 182 56 2 chr2 8198349 8198882 -242488972 + MER68 LTR ERV1 1 562 0 795 67 55 0 chr2 8200047 8200178 -242487676 - LTR12 LTR ERV1 -21 693 270 4644 107 44 92 chr2 8200179 8201156 -242486698 - pTR5 LTR ERV1 -1 2605 1520 3162 95 4 32 chr2 8201153 8201370 -242486484 - HERV9 LTR ERV1 -164 8235 8013 * 2511 62 0 7 chr2 8201370 8201674 -242486180 + AluY SINE Alu 1 302 -9 3162 95 4 32 chr2 8201674 8201950 -242485904 - HERV9 LTR ERV1 -386 8013 7756 1818 182 154 50 chr2 8201944 8202742 -242485112 - Harlequin LTR ERV1 -5176 1720 840 * 27955 90 5 8 chr2 8202743 8207763 -242480091 - Harlequin LTR ERV1 -1994 444 43 4787 80 50 134 chr2 8207763 8208665 -242479189 - LTR12 LTR ERV1 0 826 1 1944 133 32 19 chr2 8209380 8209688 -242478166 - AluSx SINE Alu 0 312 1 2153 143 3 0 chr2 8209718 8210025 -242477829 - AluJb SINE Alu -4 308 1 407 329 62 21 chr2 8210025 8210265 -242477589 - L1M4 LINE L1 -1599 4547 4298 972 73 0 7 chr2 8210875 8211011 -242476843 + L1PA6 LINE L1 5799 5933 -221 207 114 0 0 chr2 8213871 8213906 -242473948 + (T)n Simple_repeat Simple_repeat 1 35 0 1747 112 4 0 chr2 8214392 8214624 -242473230 - AluSx SINE Alu -79 233 1 1568 196 18 3 chr2 8214650 8214936 -242472918 - AluJb SINE Alu -22 290 1 24 0 0 0 chr2 8214936 8214960 -242472894 + AT_rich Low_complexity Low_complexity 1 24 0 249 250 33 43 chr2 8215159 8215251 -242472603 - MIR SINE MIR -123 139 49 291 200 0 0 chr2 8215618 8215673 -242472181 - MER116 DNA Mariner -9 71 17 734 227 76 23 chr2 8215759 8216023 -242471831 + L1ME1 LINE L1 5723 6000 -166 552 228 20 0 chr2 8216054 8216203 -242471651 + L1MA10 LINE L1 6181 6332 -2 21 0 0 0 chr2 8216607 8216628 -242471226 + AT_rich Low_complexity Low_complexity 1 21 0 473 320 47 78 chr2 8217813 8218132 -242469722 + L2 LINE L2 2963 3271 -1 3401 219 58 12 chr2 8218246 8219114 -242468740 - L1M4 LINE L1 -1136 5010 4093 1576 196 38 35 chr2 8219114 8219487 -242468367 - MLT1A2 LTR MaLR 0 374 1 3401 219 58 12 chr2 8219487 8219568 -242468286 - L1M4 LINE L1 -2053 4093 4017 2330 101 0 0 chr2 8220477 8220783 -242467071 - AluSq SINE Alu -7 306 1 981 230 4 4 chr2 8221093 8221371 -242466483 - L1M4 LINE L1 -2909 3237 2960 403 272 99 8 chr2 8222441 8222628 -242465226 - MIR SINE MIR -19 243 38 2520 67 0 6 chr2 8225076 8225388 -242462466 + AluY SINE Alu 1 310 -1 285 245 38 57 chr2 8225880 8225902 -242461952 + MIR SINE MIR 159 180 -82 1252 124 129 0 chr2 8225902 8226111 -242461743 - MER46A DNA MER2_type 0 236 1 285 245 38 57 chr2 8226111 8226194 -242461660 + MIR SINE MIR 180 262 0 204 220 40 0 chr2 8226202 8226252 -242461602 + L2 LINE L2 3261 3312 -1 3827 132 3 2 chr2 8226414 8227021 -242460833 + L1PB3 LINE L1 5545 6152 -2 200 267 173 40 chr2 8227205 8227280 -242460574 - L2 LINE L2 -6 3266 3182 195 342 127 50 chr2 8227412 8227775 -242460079 - L2 LINE L2 -1 3312 2922 986 199 6 0 chr2 8228317 8228488 -242459366 - FAM SINE Alu -3 172 1 903 271 104 56 chr2 8228531 8229270 -242458584 + L2 LINE L2 2545 3313 0 22 56 0 0 chr2 8229873 8229909 -242457945 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 8231481 8231503 -242456351 + AT_rich Low_complexity Low_complexity 1 22 0 1773 172 0 7 chr2 8232742 8233033 -242454821 + AluJo SINE Alu 1 289 -23 23 33 0 0 chr2 8233033 8233063 -242454791 + AT_rich Low_complexity Low_complexity 1 30 0 252 137 0 0 chr2 8234299 8234350 -242453504 + (TA)n Simple_repeat Simple_repeat 1 51 0 2156 121 7 0 chr2 8234814 8235112 -242452742 + AluSx SINE Alu 1 300 -12 732 195 0 8 chr2 8236115 8236238 -242451616 - FLAM_A SINE Alu -11 122 1 2809 3 0 0 chr2 8236387 8236689 -242451165 + AluYa5 SINE Alu 1 302 -9 715 223 42 0 chr2 8237152 8237345 -242450509 - MER20 DNA MER1_type -2 217 17 337 264 114 36 chr2 8237376 8237543 -242450311 - L2 LINE L2 -78 3235 3056 * 2714 291 128 31 chr2 8237538 8239200 -242448654 - L2 LINE L2 -448 2866 1043 2215 119 3 0 chr2 8240259 8240561 -242447293 - AluSx SINE Alu -9 303 1 361 287 144 23 chr2 8240565 8240739 -242447115 + L2 LINE L2 2823 3017 -296 3409 279 106 28 chr2 8240757 8240814 -242447040 - L2 LINE L2 -38 3275 3224 2225 94 30 0 chr2 8240814 8241113 -242446741 + AluSg SINE Alu 2 309 -1 3409 279 106 28 chr2 8241113 8241161 -242446693 - L2 LINE L2 -89 3224 3181 200 59 29 0 chr2 8241161 8241195 -242446659 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3409 279 106 28 chr2 8241195 8242609 -242445245 - L2 LINE L2 -132 3181 1637 384 257 46 28 chr2 8242678 8242787 -242445067 + L2 LINE L2 3203 3313 0 25 51 0 0 chr2 8243156 8243195 -242444659 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 8243300 8243330 -242444524 + AT_rich Low_complexity Low_complexity 1 30 0 1606 174 18 21 chr2 8244106 8244388 -242443466 - AluJo SINE Alu -31 281 1 226 224 134 30 chr2 8245138 8245205 -242442649 + MER5B DNA MER1_type 2 75 -103 210 331 90 8 chr2 8246756 8246889 -242440965 - MIR SINE MIR -33 229 86 252 191 0 73 chr2 8247206 8247274 -242440580 + L1MC1 LINE L1 7 69 -6357 8376 197 63 29 chr2 8247274 8247295 -242440559 + L1MC1 LINE L1 2001 2020 -4593 352 51 34 0 chr2 8247295 8247354 -242440500 + (TG)n Simple_repeat Simple_repeat 2 62 0 8376 197 63 29 chr2 8247354 8248628 -242439226 + L1MC1 LINE L1 2020 3249 -3364 1935 145 30 3 chr2 8248628 8248932 -242438922 + AluJb SINE Alu 1 312 0 8376 197 63 29 chr2 8248932 8249700 -242438154 + L1MC1 LINE L1 3249 3989 -2624 2204 112 3 13 chr2 8249700 8250003 -242437851 + AluSq SINE Alu 1 300 -13 8376 197 63 29 chr2 8250003 8252371 -242435483 + L1MC1 LINE L1 3989 6593 -20 198 103 0 0 chr2 8252380 8252409 -242435445 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1699 187 14 0 chr2 8254372 8254661 -242433193 - AluJb SINE Alu -19 293 1 241 240 264 8 chr2 8255064 8255193 -242432661 + MER103 DNA DNA 1 162 -4 2298 91 3 3 chr2 8255267 8255564 -242432290 - AluSq SINE Alu -16 297 1 24 0 0 0 chr2 8256165 8256189 -242431665 + AT_rich Low_complexity Low_complexity 1 24 0 2379 65 0 10 chr2 8256279 8256585 -242431269 - AluY SINE Alu -8 303 1 239 186 47 0 chr2 8258355 8258398 -242429456 + MER57A LTR ERV1 295 339 -64 597 173 43 81 chr2 8258464 8258649 -242429205 - MER104 DNA MER2_type -1 179 2 500 305 98 42 chr2 8258979 8259477 -242428377 + L1MC/D LINE L1 4859 5384 -762 542 259 141 15 chr2 8259509 8259788 -242428066 + L1MC/D LINE L1 5364 5664 -457 261 191 162 0 chr2 8259851 8259919 -242427935 + L1MC/D LINE L1 5678 5756 -2052 23 33 0 0 chr2 8260164 8260194 -242427660 + AT_rich Low_complexity Low_complexity 1 30 0 1631 155 53 8 chr2 8260221 8260485 -242427369 + AluJo SINE Alu 1 276 -36 1539 165 8 4 chr2 8260485 8260734 -242427120 - AluJb SINE Alu -62 250 1 433 198 10 30 chr2 8263411 8263512 -242424342 - AluJo SINE Alu -162 150 52 206 293 17 0 chr2 8264219 8264277 -242423577 + MIR SINE MIR 85 143 -65 923 183 6 23 chr2 8264879 8265054 -242422800 - FRAM SINE Alu -5 171 1 1125 321 130 19 chr2 8267077 8267240 -242420614 - L2 LINE L2 -37 3276 3132 1926 144 3 10 chr2 8267240 8267531 -242420323 + AluJb SINE Alu 1 289 -23 1125 321 130 19 chr2 8267531 8268275 -242419579 - L2 LINE L2 -181 3132 2251 722 197 8 0 chr2 8269345 8269472 -242418382 + FLAM_C SINE Alu 1 128 -5 25 65 0 0 chr2 8270233 8270279 -242417575 + AT_rich Low_complexity Low_complexity 1 46 0 2663 218 59 26 chr2 8270387 8271081 -242416773 - MER21B LTR ERV1 -49 814 98 226 225 11 101 chr2 8271200 8271289 -242416565 - MER21B LTR ERV1 -766 97 17 1635 191 38 0 chr2 8271296 8271611 -242416243 + MER7A DNA MER2_type 21 345 -1 25 0 0 0 chr2 8272001 8272026 -242415828 + AT_rich Low_complexity Low_complexity 1 25 0 1985 138 7 7 chr2 8272209 8272498 -242415356 - AluSx SINE Alu -23 289 1 327 271 97 32 chr2 8272669 8272824 -242415030 - MIR SINE MIR -48 214 50 856 171 14 47 chr2 8273010 8273221 -242414633 + MER3 DNA MER1_type 1 204 -5 2059 149 0 7 chr2 8273460 8273762 -242414092 + AluSx SINE Alu 4 303 -9 2150 113 0 14 chr2 8274618 8274938 -242412916 - AluSx SINE Alu 0 312 1 45 34 0 0 chr2 8275084 8275143 -242412711 + AT_rich Low_complexity Low_complexity 1 59 0 2307 92 7 0 chr2 8276121 8276416 -242411438 + AluSx SINE Alu 1 297 -15 489 228 0 35 chr2 8276580 8276725 -242411129 - L1ME3 LINE L1 -1 6161 6022 24 67 0 0 chr2 8277156 8277201 -242410653 + AT_rich Low_complexity Low_complexity 1 45 0 251 111 0 22 chr2 8277437 8277482 -242410372 + (GGAA)n Simple_repeat Simple_repeat 4 47 0 2280 97 0 16 chr2 8278547 8278857 -242408997 + AluSg SINE Alu 1 305 -5 1589 192 65 107 chr2 8279204 8279897 -242407957 + L1MC4a LINE L1 6840 7503 -305 2047 147 13 0 chr2 8280024 8280331 -242407523 + AluJb SINE Alu 1 311 -1 1865 128 0 4 chr2 8280331 8280596 -242407258 + AluSx SINE Alu 41 304 -8 503 351 26 22 chr2 8281179 8281410 -242406444 + MIR SINE MIR 5 236 -26 23 33 0 0 chr2 8282118 8282148 -242405706 + AT_rich Low_complexity Low_complexity 1 30 0 2178 107 3 3 chr2 8284447 8284738 -242403116 + AluSx SINE Alu 1 291 -21 266 248 198 66 chr2 8285195 8285316 -242402538 + L2 LINE L2 3136 3272 0 209 138 100 12 chr2 8286025 8286105 -242401749 + (TATAA)n Simple_repeat Simple_repeat 4 90 0 316 284 156 28 chr2 8286356 8286606 -242401248 + MLT1J LTR MaLR 230 511 0 434 226 57 124 chr2 8287138 8287245 -242400609 + MARNA DNA Mariner 88 201 -385 1851 142 16 32 chr2 8287245 8287554 -242400300 + AluJb SINE Alu 1 304 -8 434 226 57 124 chr2 8287554 8287760 -242400094 + MARNA DNA Mariner 201 380 -206 1594 164 82 0 chr2 8287877 8288158 -242399696 - AluJo SINE Alu -8 304 1 21 0 0 0 chr2 8288338 8288359 -242399495 + AT_rich Low_complexity Low_complexity 1 21 0 185 333 83 30 chr2 8288997 8289129 -242398725 + MIR SINE MIR 124 262 0 1753 168 7 3 chr2 8289305 8289608 -242398246 + AluJb SINE Alu 2 305 -7 2869 153 12 36 chr2 8289616 8289996 -242397858 + L1MB2 LINE L1 5681 6048 -123 2086 127 3 3 chr2 8289996 8290296 -242397558 + AluSx SINE Alu 1 300 -12 2869 153 12 36 chr2 8290296 8290417 -242397437 + L1MB2 LINE L1 6048 6170 -1 197 116 0 47 chr2 8290468 8290511 -242397343 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 2198 79 20 17 chr2 8290710 8291002 -242396852 + AluY SINE Alu 2 294 -17 2354 90 7 0 chr2 8291232 8291542 -242396312 + AluSp SINE Alu 1 312 -1 191 135 27 0 chr2 8291830 8291867 -242395987 + L2 LINE L2 3273 3310 -3 899 224 65 53 chr2 8292249 8292570 -242395284 + L2 LINE L2 2333 2657 -657 1000 99 46 7 chr2 8292574 8292726 -242395128 + L1MA7 LINE L1 6128 6285 -6 708 233 45 11 chr2 8292738 8292914 -242394940 - MER5A DNA MER1_type -6 183 2 439 324 97 29 chr2 8292914 8293396 -242394458 + L2 LINE L2 2709 3225 -88 869 236 68 8 chr2 8293402 8293639 -242394215 + L1ME1 LINE L1 4923 5173 -973 1068 261 40 40 chr2 8293651 8293976 -242393878 + MLT1-int LTR MaLR 1046 1370 -1 1046 243 41 4 chr2 8293976 8294231 -242393623 + L1ME1 LINE L1 5895 6159 -7 290 174 0 0 chr2 8294245 8294291 -242393563 + LTR56 LTR ERV1 349 394 -51 365 230 290 14 chr2 8294304 8294656 -242393198 + L1ME4a LINE L1 5601 6049 -72 246 222 97 14 chr2 8295076 8295148 -242392706 - MLT1K LTR MaLR 0 588 511 2243 118 0 0 chr2 8295326 8295622 -242392232 - AluJb SINE Alu -16 296 1 204 340 10 10 chr2 8295851 8295954 -242391900 + L2 LINE L2 2594 2696 -618 1530 167 19 55 chr2 8296361 8296673 -242391181 - L1MA4 LINE L1 -3 6297 5997 198 283 50 0 chr2 8296730 8296790 -242391064 + MIR SINE MIR 197 259 -3 23 78 0 0 chr2 8296909 8296960 -242390894 + AT_rich Low_complexity Low_complexity 1 51 0 350 365 54 12 chr2 8296961 8297128 -242390726 + L2 LINE L2 3098 3271 -1 451 296 66 28 chr2 8297636 8297849 -242390005 + L2 LINE L2 2673 2893 -421 * 617 248 57 108 chr2 8297844 8298159 -242389695 + L2 LINE L2 3014 3312 -1 242 0 61 0 chr2 8298269 8298302 -242389552 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1757 156 3 27 chr2 8298309 8298610 -242389244 - AluJo SINE Alu -18 294 1 198 324 28 0 chr2 8298631 8298702 -242389152 + L2 LINE L2 3223 3295 -18 699 82 0 10 chr2 8299046 8299144 -242388710 + AluJb SINE Alu 209 305 -7 559 242 24 30 chr2 8299883 8300048 -242387806 - MER5A DNA MER1_type 0 189 26 203 308 51 13 chr2 8300202 8300280 -242387574 + MER5A DNA MER1_type 70 150 -39 180 121 15 61 chr2 8301126 8301192 -242386662 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 1672 139 3 86 chr2 8301640 8301967 -242385887 + AluJo SINE Alu 5 306 0 2592 117 5 8 chr2 8302129 8302505 -242385349 - THE1C LTR MaLR 0 375 1 1794 160 37 7 chr2 8303154 8303454 -242384400 - AluSx SINE Alu -3 309 1 620 240 117 0 chr2 8303653 8303830 -242384024 + MLT1J2 LTR MaLR 244 398 -11 197 214 48 0 chr2 8304539 8304581 -242383273 - L2 LINE L2 -50 3222 3179 384 260 60 72 chr2 8307050 8307291 -242380563 + MLT1G1 LTR MaLR 1 237 -312 228 286 0 0 chr2 8307365 8307421 -242380433 + GA-rich Low_complexity Low_complexity 2 57 0 289 254 16 95 chr2 8307579 8307705 -242380149 + MLT1J2 LTR MaLR 451 566 -29 362 303 99 24 chr2 8308375 8308586 -242379268 + MLT1J-int LTR MaLR 1141 1367 -4 2579 143 43 17 chr2 8308675 8309096 -242378758 + MSTB1 LTR MaLR 1 432 0 265 273 0 15 chr2 8309103 8309169 -242378685 + MLT1J LTR MaLR 64 128 -427 6330 153 48 5 chr2 8309173 8309451 -242378403 + L1PB1 LINE L1 3868 4133 -2018 1082 47 24 12 chr2 8309451 8309621 -242378233 + (GAAA)n Simple_repeat Simple_repeat 3 174 0 6330 153 48 5 chr2 8309621 8311450 -242376404 + L1PB1 LINE L1 4133 6069 -82 385 161 0 0 chr2 8311522 8311584 -242376270 - MER63 DNA MER1_type -756 305 244 269 277 53 0 chr2 8311524 8311618 -242376236 + MER63 DNA MER1_type 426 524 -536 * 884 219 51 30 chr2 8311660 8311897 -242375957 - MER63 DNA MER1_type -815 246 5 * 1136 161 86 48 chr2 8311887 8312135 -242375719 + MER33 DNA MER1_type 10 272 -2313 2361 107 7 0 chr2 8312135 8312443 -242375411 - AluSx SINE Alu -2 310 1 1136 161 86 48 chr2 8312443 8312486 -242375368 + MER33 DNA MER1_type 272 312 -12 506 247 96 18 chr2 8312541 8312707 -242375147 + MLT1J LTR MaLR 231 409 -102 207 0 0 0 chr2 8312736 8312759 -242375095 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 228 300 43 0 chr2 8313038 8313108 -242374746 + MIR SINE MIR 74 146 -116 390 286 64 82 chr2 8313309 8313529 -242374325 + MLT1L LTR MaLR 389 604 -11 3074 226 83 11 chr2 8314074 8315386 -242372468 + L1ME2 LINE L1 4705 6106 -58 1118 198 60 52 chr2 8315553 8315821 -242372033 - Tigger1 DNA MER2_type -2141 277 8 4331 208 79 31 chr2 8315967 8316962 -242370892 - L1MB7 LINE L1 -10 6174 5227 1632 163 10 42 chr2 8316962 8317268 -242370586 - AluJo SINE Alu -14 298 3 4331 208 79 31 chr2 8317268 8318127 -242369727 - L1MB7 LINE L1 -957 5227 4246 2639 251 156 25 chr2 8318116 8319683 -242368171 - L1M4c LINE L1 -3950 2875 966 * 1104 225 136 108 chr2 8320164 8320865 -242366989 + LTR8A LTR ERV1 1 720 -7 465 233 25 63 chr2 8320893 8321052 -242366802 - L1M4c LINE L1 -6320 222 70 283 274 82 0 chr2 8322870 8322943 -242364911 - L2 LINE L2 -57 3215 3137 589 170 156 21 chr2 8322987 8323128 -242364726 + MER104 DNA Tc2 18 177 -3 557 251 114 0 chr2 8323130 8323297 -242364557 - MIR SINE MIR -63 199 14 952 182 0 28 chr2 8323316 8323492 -242364362 - AluJb SINE Alu 0 312 142 243 282 94 0 chr2 8324092 8324177 -242363677 - MIR SINE MIR -7 255 163 2876 133 27 0 chr2 8325035 8325449 -242362405 - MSTA LTR MaLR -3 425 1 1920 192 113 21 chr2 8325677 8326156 -242361698 - Charlie1b DNA MER1_type 0 523 1 366 80 0 0 chr2 8326521 8326571 -242361283 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 1833 166 0 3 chr2 8326571 8326855 -242360999 - AluJb SINE Alu -29 283 1 675 118 0 0 chr2 8326876 8326969 -242360885 - L1P4 LINE L1 -469 5705 5613 3996 45 68 0 chr2 8326973 8327490 -242360364 + LTR30 LTR ERV1 1 552 -170 3461 16 3 0 chr2 8327490 8327876 -242359978 - L1PA4 LINE L1 -208 5947 5561 1700 45 0 0 chr2 8327876 8328078 -242359776 + L1PA4 LINE L1 5952 6153 -2 1390 78 6 0 chr2 8328078 8328257 -242359597 + LTR30 LTR ERV1 543 722 0 3672 77 14 115 chr2 8328257 8328545 -242359309 - L1PA8A LINE L1 -499 5632 5316 440 103 0 0 chr2 8328545 8328603 -242359251 - MSTA LTR MaLR -95 333 276 3672 77 14 115 chr2 8328603 8329171 -242358683 - L1PA8A LINE L1 -815 5316 4770 368 255 101 90 chr2 8329817 8330005 -242357849 + MIR SINE MIR 56 245 -17 1441 190 30 7 chr2 8330569 8330838 -242357016 - AluJo SINE Alu -30 282 8 284 327 9 47 chr2 8333304 8333411 -242354443 - MIR SINE MIR -82 126 24 267 279 29 0 chr2 8333741 8333809 -242354045 + L2 LINE L2 3153 3222 -50 2099 99 7 20 chr2 8334112 8334406 -242353448 + AluSg SINE Alu 21 310 0 222 37 0 0 chr2 8334414 8334441 -242353413 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 467 248 14 43 chr2 8335364 8335505 -242352349 - L2 LINE L2 0 3272 3136 2302 106 0 3 chr2 8337872 8338183 -242349671 - AluSx SINE Alu -2 310 1 744 100 27 0 chr2 8338998 8339108 -242348746 + MER3 DNA MER1_type 1 113 -96 1050 98 92 0 chr2 8339110 8339263 -242348591 + AluSg/x SINE Alu 139 305 -7 417 214 102 10 chr2 8339263 8339361 -242348493 + MER3 DNA MER1_type 103 209 0 197 257 139 0 chr2 8340025 8340126 -242347728 + L2 LINE L2 2230 2344 -970 * 251 300 29 0 chr2 8340124 8340194 -242347660 - L2 LINE L2 0 3313 3242 812 239 25 5 chr2 8340402 8340599 -242347255 + MER20 DNA MER1_type 1 201 -18 2197 113 0 3 chr2 8341460 8341753 -242346101 - AluSg SINE Alu -18 292 1 324 0 0 0 chr2 8342239 8342275 -242345579 + (CA)n Simple_repeat Simple_repeat 2 37 0 321 275 107 20 chr2 8342925 8343074 -242344780 + MIR SINE MIR 101 262 0 417 320 64 0 chr2 8343461 8343586 -242344268 - L2 LINE L2 -1 3271 3139 450 344 0 7 chr2 8343779 8343933 -242343921 - MIR SINE MIR -109 153 1 9436 136 25 11 chr2 8344058 8345682 -242342172 + Tigger1 DNA MER2_type 1 1647 -771 435 52 0 0 chr2 8345866 8345924 -242341930 + (TA)n Simple_repeat Simple_repeat 2 59 0 1317 164 36 73 chr2 8345924 8346198 -242341656 - AluJb SINE Alu -2 310 47 25 0 0 0 chr2 8346206 8346231 -242341623 + AT_rich Low_complexity Low_complexity 1 25 0 2378 91 3 0 chr2 8346432 8346728 -242341126 - AluSp SINE Alu -16 297 1 593 223 152 40 chr2 8346815 8347039 -242340815 - LTR50 LTR ERVL -356 439 191 189 0 0 0 chr2 8347220 8347241 -242340613 + (A)n Simple_repeat Simple_repeat 1 21 0 416 301 124 16 chr2 8347704 8347890 -242339964 - MIR3 SINE MIR -1 207 2 334 277 187 24 chr2 8348144 8348310 -242339544 - MIR SINE MIR -50 212 20 776 204 15 91 chr2 8349375 8349704 -242338150 + L1MC4 LINE L1 7738 8041 -1 358 250 36 18 chr2 8349997 8350109 -242337745 + MIR SINE MIR 31 144 -118 2219 106 10 0 chr2 8350232 8350525 -242337329 - AluSx SINE Alu -16 296 1 195 218 0 0 chr2 8351248 8351303 -242336551 + GA-rich Low_complexity Low_complexity 3 57 0 1127 157 41 83 chr2 8351939 8352181 -242335673 + AluJb SINE Alu 79 310 -2 408 55 0 0 chr2 8352183 8352238 -242335616 + (TA)n Simple_repeat Simple_repeat 1 55 0 279 282 56 51 chr2 8352544 8352760 -242335094 - L1MEd LINE L1 -4881 1238 1022 29 28 0 0 chr2 8352905 8352941 -242334913 + AT_rich Low_complexity Low_complexity 1 36 0 1887 143 14 0 chr2 8353381 8353702 -242334152 + AluSx SINE Alu 1 325 0 1294 251 256 3 chr2 8353782 8354416 -242333438 - LTR50 LTR ERVL -1 794 1 1469 174 14 56 chr2 8354635 8354922 -242332932 + AluJo SINE Alu 1 275 -37 560 119 50 0 chr2 8354959 8355060 -242332794 + L1MC4a LINE L1 6890 6995 -813 1714 176 41 13 chr2 8355190 8355581 -242332273 - LTR52 LTR ERVL -9 412 11 2046 160 21 0 chr2 8355601 8355976 -242331878 + MLT1B LTR MaLR 1 383 -7 2188 121 3 3 chr2 8356687 8356992 -242330862 + AluSx SINE Alu 6 310 -2 270 293 98 12 chr2 8356998 8357080 -242330774 + MIR SINE MIR 20 108 -154 2289 102 10 0 chr2 8357260 8357553 -242330301 - AluSp SINE Alu -17 296 1 21 36 0 0 chr2 8357559 8357587 -242330267 + AT_rich Low_complexity Low_complexity 1 28 0 468 239 118 31 chr2 8358619 8358987 -242328867 - L1ME LINE L1 -528 5593 5175 225 132 0 26 chr2 8359698 8359736 -242328118 + MER3 DNA MER1_type 46 82 -127 513 225 17 0 chr2 8360179 8360299 -242327555 + MER33 DNA MER1_type 1 122 -202 283 329 50 56 chr2 8360355 8360516 -242327338 - MER5A DNA MER1_type -12 177 18 586 298 116 6 chr2 8360614 8360976 -242326878 + L1ME3 LINE L1 5428 5829 -333 747 256 53 112 chr2 8361519 8361925 -242325929 - L1MC4 LINE L1 -561 7481 7130 437 90 15 0 chr2 8361925 8361992 -242325862 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 747 256 53 112 chr2 8361992 8362265 -242325589 - L1MC4 LINE L1 -912 7130 6842 2177 174 133 2 chr2 8362435 8362888 -242324966 - MLT2B2 LTR ERVL -3 512 1 694 254 181 14 chr2 8362900 8363370 -242324484 - MLT1H LTR MaLR -5 550 8 1252 108 0 0 chr2 8364210 8364367 -242323487 + AluSq SINE Alu 1 157 -156 1445 88 83 5 chr2 8364367 8364584 -242323270 + L1PB1 LINE L1 5918 6151 0 23 0 0 0 chr2 8364584 8364607 -242323247 + AT_rich Low_complexity Low_complexity 1 23 0 4450 135 5 23 chr2 8364626 8365405 -242322449 + L1PB4 LINE L1 5378 6142 -14 396 0 0 0 chr2 8365776 8365820 -242322034 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 602 176 57 100 chr2 8367361 8367571 -242320283 - MER3 DNA MER1_type -8 201 1 2193 112 3 0 chr2 8368382 8368687 -242319167 + AluSq SINE Alu 1 306 -7 615 297 108 0 chr2 8369060 8369282 -242318572 - MIR SINE MIR -12 250 5 2055 134 0 3 chr2 8369309 8369636 -242318218 - AluSx SINE Alu 0 312 1 214 158 53 35 chr2 8370203 8370260 -242317594 + C-rich Low_complexity Low_complexity 1 58 0 22 99 0 0 chr2 8370369 8370440 -242317414 + GC_rich Low_complexity Low_complexity 1 71 0 517 246 222 10 chr2 8371180 8371387 -242316467 - MIR SINE MIR -3 259 9 544 97 0 0 chr2 8372114 8372186 -242315668 + AluJ/FRAM SINE Alu 222 293 -19 2090 113 17 13 chr2 8372188 8372489 -242315365 + AluSx SINE Alu 1 302 -10 225 0 0 0 chr2 8372503 8372528 -242315326 + (GA)n Simple_repeat Simple_repeat 2 26 0 728 278 86 17 chr2 8372591 8372825 -242315029 + MIR SINE MIR 3 252 -10 2249 188 34 34 chr2 8372828 8372893 -242314961 - MLT2B1 LTR ERVL -8 512 448 481 75 12 12 chr2 8372893 8372973 -242314881 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 2249 188 34 34 chr2 8372973 8373413 -242314441 - MLT2B1 LTR ERVL -71 449 7 198 189 0 0 chr2 8373701 8373738 -242314116 - MIR SINE MIR -10 252 216 443 285 27 43 chr2 8373873 8374039 -242313815 + MIR SINE MIR 19 180 -66 217 262 110 84 chr2 8374611 8374802 -242313052 + MIR3 SINE MIR 5 200 -8 538 229 260 10 chr2 8376294 8376486 -242311368 + MIR SINE MIR 22 261 -1 186 174 0 0 chr2 8376491 8376537 -242311317 + (CAT)n Simple_repeat Simple_repeat 3 48 0 1502 106 5 0 chr2 8376614 8376831 -242311023 + L1PA10 LINE L1 5949 6166 -2 374 351 27 21 chr2 8377594 8377782 -242310072 + MER5A DNA MER1_type 1 189 0 922 243 65 90 chr2 8378456 8378565 -242309289 - HAL1 LINE L1 -31 2476 2366 2053 108 19 54 chr2 8378565 8378881 -242308973 - AluSx SINE Alu -7 305 1 922 243 65 90 chr2 8378881 8379281 -242308573 - HAL1 LINE L1 -141 2366 1980 338 351 31 4 chr2 8379391 8379619 -242308235 - HAL1 LINE L1 -510 1997 1764 457 180 39 47 chr2 8379794 8379922 -242307932 + MER106A DNA MER1_type 108 234 -2 1333 214 88 30 chr2 8380176 8380675 -242307179 - HAL1 LINE L1 -910 1597 1070 2315 116 0 19 chr2 8381127 8381445 -242306409 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 8381728 8381750 -242306104 + AT_rich Low_complexity Low_complexity 1 22 0 363 193 36 12 chr2 8382953 8383036 -242304818 - L2 LINE L2 0 3313 3229 27 62 0 0 chr2 8383520 8383568 -242304286 + AT_rich Low_complexity Low_complexity 1 48 0 709 45 0 0 chr2 8383890 8383978 -242303876 + L1PA5 LINE L1 11 98 -6048 * 24800 49 3 1 chr2 8383976 8389493 -242298361 + L1PA5 LINE L1 623 6154 0 363 233 126 37 chr2 8389608 8389823 -242298031 + L1MC/D LINE L1 5311 5544 -2264 765 293 120 13 chr2 8390058 8390509 -242297345 + MLT1L LTR MaLR 24 522 -93 207 275 0 58 chr2 8391670 8391739 -242296115 - L2 LINE L2 -66 3206 3142 16468 187 52 17 chr2 8391878 8393007 -242294847 - L1PA15-16 LINE L1 -948 5901 4813 2282 82 0 0 chr2 8393007 8393315 -242294539 - AluY SINE Alu 0 308 1 16468 187 52 17 chr2 8393315 8393796 -242294058 - L1PA15-16 LINE L1 -2036 4813 4350 2175 135 0 0 chr2 8393796 8394093 -242293761 - AluSx SINE Alu -15 297 1 16468 187 52 17 chr2 8394093 8398208 -242289646 - L1PA15-16 LINE L1 -2499 4350 10 3140 126 23 6 chr2 8398224 8398741 -242289113 + Tigger1 DNA MER2_type 1893 2418 0 1728 180 27 23 chr2 8399005 8399305 -242288549 + AluJo SINE Alu 1 301 -11 347 220 86 59 chr2 8399619 8399805 -242288049 + L1MC5 LINE L1 7717 7907 -54 1970 174 0 3 chr2 8402038 8402349 -242285505 - AluJb SINE Alu -2 310 1 199 204 0 23 chr2 8402873 8402917 -242284937 - L2 LINE L2 0 3272 3230 226 246 87 14 chr2 8403328 8403397 -242284457 + MER5A DNA MER1_type 63 136 -53 327 328 82 16 chr2 8403729 8404144 -242283710 + L1ME LINE L1 5308 5706 -415 265 342 0 8 chr2 8404328 8404445 -242283409 + LTR16B LTR ERVL 1 116 -348 365 208 13 0 chr2 8404712 8404789 -242283065 - MIR SINE MIR -47 215 138 246 156 0 0 chr2 8405235 8405280 -242282574 + (CA)n Simple_repeat Simple_repeat 1 45 0 207 0 0 0 chr2 8407036 8407059 -242280795 + (CA)n Simple_repeat Simple_repeat 1 23 0 374 222 51 34 chr2 8407062 8407179 -242280675 + HAL1 LINE L1 795 913 -1594 1619 224 69 93 chr2 8407380 8407521 -242280333 + HAL1 LINE L1 971 1114 -1393 2207 105 0 7 chr2 8407521 8407816 -242280038 + AluSp SINE Alu 3 295 -18 1619 224 69 93 chr2 8407816 8408044 -242279810 + HAL1 LINE L1 1114 1346 -1161 2108 121 0 23 chr2 8408044 8408349 -242279505 + AluSx SINE Alu 1 298 -14 1619 224 69 93 chr2 8408349 8408493 -242279361 + HAL1 LINE L1 1346 1492 -1015 2396 57 3 3 chr2 8408493 8408789 -242279065 + AluY SINE Alu 1 296 -15 1619 224 69 93 chr2 8408789 8409152 -242278702 + HAL1 LINE L1 1492 1828 -679 304 309 36 63 chr2 8409292 8409515 -242278339 + HAL1 LINE L1 1849 2065 -442 237 245 49 0 chr2 8409540 8409642 -242278212 + HAL1 LINE L1 2068 2174 -333 4677 157 30 50 chr2 8409662 8410540 -242277314 + L1MB7 LINE L1 4901 5740 -444 2535 109 3 8 chr2 8410540 8410906 -242276948 - THE1B LTR MaLR 0 364 1 4677 157 30 50 chr2 8410906 8411330 -242276524 + L1MB7 LINE L1 5740 6171 -13 42829 36 0 0 chr2 8411350 8417515 -242270339 + L1PA4 LINE L1 4 6169 0 2408 81 3 0 chr2 8417517 8417812 -242270042 + AluSg SINE Alu 1 296 -14 374 291 108 24 chr2 8417812 8418107 -242269747 + HAL1 LINE L1 2187 2506 -1 429 293 73 24 chr2 8418424 8418629 -242269225 + MIR SINE MIR 37 251 -11 226 318 106 65 chr2 8419017 8419234 -242268620 + MIR SINE MIR 31 256 -6 1576 172 11 8 chr2 8419660 8419921 -242267933 - AluJb SINE Alu -44 268 7 345 267 151 5 chr2 8419953 8420187 -242267667 - L1ME2 LINE L1 -248 5914 5650 626 246 5 5 chr2 8420188 8420375 -242267479 - Charlie1 DNA MER1_type 0 2761 2575 629 292 5 10 chr2 8420381 8420598 -242267256 - L1ME2 LINE L1 -567 5599 5405 1808 134 33 24 chr2 8420810 8421139 -242266715 + MER1B DNA MER1_type 8 339 0 318 238 86 29 chr2 8421247 8421352 -242266502 + MIR SINE MIR 107 217 -45 491 206 44 56 chr2 8421356 8421516 -242266338 + L1MC4a LINE L1 5775 5932 -1876 360 0 0 0 chr2 8421538 8421578 -242266276 + (TA)n Simple_repeat Simple_repeat 2 41 0 2104 261 71 50 chr2 8421596 8421654 -242266200 + L1MC4a LINE L1 6104 6159 -1649 180 77 0 0 chr2 8421654 8421680 -242266174 + (TTAAA)n Simple_repeat Simple_repeat 3 28 0 2104 261 71 50 chr2 8421680 8422650 -242265204 + L1MC4a LINE L1 6159 7154 -654 295 276 152 21 chr2 8422726 8422868 -242264986 - MIR SINE MIR -62 146 15 22 0 0 0 chr2 8423507 8423529 -242264325 + AT_rich Low_complexity Low_complexity 1 22 0 2764 142 11 2 chr2 8423727 8424177 -242263677 - L1PA16 LINE L1 -1 6165 5712 2170 93 11 0 chr2 8424648 8424968 -242262886 - AluSg1 SINE Alu 0 323 1 1662 152 74 0 chr2 8425224 8425493 -242262361 - AluJb SINE Alu -23 289 1 322 333 139 6 chr2 8425524 8425689 -242262165 - MIR SINE MIR -38 224 38 208 269 0 0 chr2 8426413 8426465 -242261389 + L2 LINE L2 3262 3313 0 23 33 0 0 chr2 8428050 8428080 -242259774 + AT_rich Low_complexity Low_complexity 1 30 0 1191 222 18 45 chr2 8429504 8429901 -242257953 + L1ME1 LINE L1 5776 6161 -5 26 0 0 0 chr2 8429905 8429931 -242257923 + AT_rich Low_complexity Low_complexity 1 26 0 252 174 29 72 chr2 8430203 8430272 -242257582 - MIR3 SINE MIR -28 180 115 * 770 334 153 14 chr2 8430268 8431150 -242256704 + L2 LINE L2 2170 3179 -134 1623 100 4 8 chr2 8431291 8431532 -242256322 + L1PA8 LINE L1 5931 6170 -2 433 226 0 10 chr2 8431584 8431686 -242256168 + U13 snRNA snRNA 1 101 -3 305 264 94 19 chr2 8432150 8432256 -242255598 + L2 LINE L2 3189 3302 -11 251 294 118 8 chr2 8433045 8433164 -242254690 + MIR SINE MIR 55 186 -76 3496 152 73 6 chr2 8433356 8434045 -242253809 + L1MB8 LINE L1 5442 6176 -2 228 316 0 13 chr2 8434334 8434413 -242253441 + GA-rich Low_complexity Low_complexity 1 78 0 291 346 42 42 chr2 8434643 8434860 -242252994 + MIR SINE MIR 34 250 -12 525 194 0 11 chr2 8435393 8435486 -242252368 - L2 LINE L2 0 3272 3181 723 266 46 8 chr2 8435992 8436233 -242251621 + L1M4 LINE L1 3384 3633 -2513 947 236 98 0 chr2 8436237 8436513 -242251341 + L1MC4 LINE L1 7596 7898 -144 22 56 0 0 chr2 8436546 8436582 -242251272 + AT_rich Low_complexity Low_complexity 1 36 0 1525 148 67 78 chr2 8436718 8437091 -242250763 + L1MB2 LINE L1 5793 6161 -10 781 287 92 47 chr2 8438078 8438569 -242249285 + L2 LINE L2 2228 2740 -574 2008 178 18 50 chr2 8438582 8438983 -242248871 + L1MC3 LINE L1 7138 7525 -260 1809 144 46 7 chr2 8438983 8439267 -242248587 + AluJb SINE Alu 1 295 -17 2008 178 18 50 chr2 8439267 8439309 -242248545 + L1MC3 LINE L1 7525 7567 -218 1538 167 23 87 chr2 8439310 8439702 -242248152 + MLT1A2 LTR MaLR 3 505 0 1113 159 14 14 chr2 8439709 8439929 -242247925 + L1MC3 LINE L1 7566 7785 0 442 176 0 69 chr2 8440060 8440162 -242247692 + L1ME2 LINE L1 6069 6163 -1 393 279 33 25 chr2 8440197 8440319 -242247535 - MLT1G3 LTR MaLR -27 568 446 * 728 258 36 0 chr2 8440297 8440464 -242247390 - MLT1G3 LTR MaLR -187 343 171 338 252 47 16 chr2 8440521 8440648 -242247206 + L1ME4a LINE L1 5991 6121 0 261 327 44 25 chr2 8440663 8440822 -242247032 - Tigger8 DNA MER2_type -2 664 503 555 307 135 17 chr2 8441886 8442300 -242245554 - Tigger8 DNA MER2_type -162 504 42 224 374 0 26 chr2 8442418 8442533 -242245321 + L3 LINE CR1 1366 1477 -100 187 239 45 114 chr2 8442645 8442733 -242245121 - MIR SINE MIR -170 92 11 22 0 0 0 chr2 8443022 8443044 -242244810 + AT_rich Low_complexity Low_complexity 1 22 0 306 282 122 32 chr2 8444220 8444376 -242243478 - L3 LINE CR1 -384 1193 1024 481 264 37 62 chr2 8444454 8444696 -242243158 + MER102b DNA MER1_type 97 332 -9 763 173 0 36 chr2 8444986 8445125 -242242729 - FLAM_C SINE Alu -8 135 2 300 237 13 0 chr2 8446693 8446769 -242241085 - MIR SINE MIR -119 143 67 241 175 0 0 chr2 8447815 8447855 -242239999 + L1M2 LINE L1 5600 5639 -661 329 50 0 0 chr2 8447855 8447895 -242239959 + AluSc SINE Alu 216 255 -44 2582 50 0 3 chr2 8448280 8448580 -242239274 - AluY SINE Alu -12 299 1 251 350 0 20 chr2 8448709 8448809 -242239045 - MER5A DNA MER1_type -85 104 7 196 260 0 0 chr2 8448911 8448961 -242238893 - L2 LINE L2 -1444 1870 1821 604 249 135 54 chr2 8449186 8449535 -242238319 + LTR33 LTR ERVL 144 520 -1 417 236 67 61 chr2 8450349 8450514 -242237340 - MIR SINE MIR -52 210 45 187 231 154 0 chr2 8451164 8451229 -242236625 + MIR SINE MIR 123 197 -65 941 168 14 0 chr2 8453246 8453389 -242234465 - Tigger3b DNA MER2_type 0 1231 1087 4520 136 75 41 chr2 8453394 8454240 -242233614 - Tigger3b DNA MER2_type -357 874 1 1697 170 16 31 chr2 8456026 8456343 -242231511 + AluJo SINE Alu 1 312 0 931 102 5 43 chr2 8456344 8456530 -242231324 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 811 131 32 20 chr2 8456516 8456768 -242231086 + GA-rich Low_complexity Low_complexity 1 255 0 * 28 29 0 0 chr2 8457427 8457462 -242230392 + AT_rich Low_complexity Low_complexity 1 35 0 2923 176 54 48 chr2 8458323 8459029 -242228825 - MER67C LTR ERV1 0 710 1 353 225 22 0 chr2 8459383 8459472 -242228382 - HsTC2 DNA Tc2 -2 1896 1806 2620 200 89 21 chr2 8459501 8460627 -242227227 - L1M3c LINE L1 -4805 1336 3 10605 158 76 48 chr2 8460709 8461298 -242226556 - L1MC3 LINE L1 0 7785 7214 308 284 0 0 chr2 8461298 8461379 -242226475 - MLT1F1 LTR MaLR -442 125 45 10605 158 76 48 chr2 8461379 8462937 -242224917 - L1MC3 LINE L1 -571 7214 5497 611 272 122 68 chr2 8462937 8463404 -242224450 - LTR67 LTR ERVL -34 523 32 444 264 121 37 chr2 8463436 8463784 -242224070 + L1ME4a LINE L1 5699 6075 -46 21 0 0 0 chr2 8463789 8463810 -242224044 + AT_rich Low_complexity Low_complexity 1 21 0 1963 149 10 3 chr2 8463819 8464115 -242223739 + AluSx SINE Alu 1 298 -14 948 292 40 47 chr2 8464354 8464827 -242223027 - MLT1J LTR MaLR -9 502 33 564 195 81 0 chr2 8464827 8464950 -242222904 + FLAM_A SINE Alu 1 133 0 644 106 0 10 chr2 8464955 8465059 -242222795 + (GGAA)n Simple_repeat Simple_repeat 3 105 0 228 311 39 19 chr2 8465079 8465182 -242222672 - MER5B DNA MER1_type 0 178 74 1734 145 31 102 chr2 8465594 8466014 -242221840 + MLT1B LTR MaLR 1 390 0 640 202 9 0 chr2 8466135 8466249 -242221605 - MER31B LTR ERV1 -351 115 1 2223 119 7 0 chr2 8466997 8467300 -242220554 - AluSq SINE Alu -8 305 1 279 250 71 120 chr2 8467303 8467487 -242220367 - MER5B DNA MER1_type -3 175 1 421 296 0 0 chr2 8467487 8467595 -242220259 - MIR3 SINE MIR -48 160 53 650 156 266 0 chr2 8467845 8467999 -242219855 + L1PA16 LINE L1 5963 6157 -9 1926 137 50 7 chr2 8468041 8468341 -242219513 + AluSq SINE Alu 1 313 0 3061 161 78 24 chr2 8469029 8469661 -242218193 + MER39 LTR ERV1 1 707 0 2106 116 184 68 chr2 8469736 8470145 -242217709 + LTR54 LTR ERV1 1 470 -40 1618 184 0 49 chr2 8470145 8470449 -242217405 + AluJb SINE Alu 3 291 -21 2106 116 184 68 chr2 8470449 8470496 -242217358 + LTR54 LTR ERV1 470 510 0 1248 157 5 18 chr2 8472021 8472238 -242215616 + AluJo SINE Alu 85 298 -14 2299 97 0 26 chr2 8472318 8472627 -242215227 + AluSc SINE Alu 1 301 -8 2130 123 13 7 chr2 8472689 8472990 -242214864 + AluSx SINE Alu 1 303 -9 417 133 0 0 chr2 8473307 8473367 -242214487 + AluS SINE Alu 2 61 -257 189 271 93 19 chr2 8473382 8473489 -242214365 + MIR3 SINE MIR 87 201 -7 274 241 17 129 chr2 8473659 8473716 -242214138 + L3 LINE CR1 1282 1321 -256 1944 147 3 0 chr2 8473716 8474009 -242213845 + AluJb SINE Alu 1 294 -18 274 241 17 129 chr2 8474009 8474067 -242213787 + L3 LINE CR1 1321 1384 -193 530 293 72 14 chr2 8474107 8474329 -242213525 - MIR SINE MIR -26 236 2 246 277 15 0 chr2 8474357 8474422 -242213432 - L1MEc LINE L1 -5026 1370 1305 2634 64 0 0 chr2 8474486 8474797 -242213057 + AluY SINE Alu 1 311 0 630 263 84 49 chr2 8475209 8475547 -242212307 - L1MEc LINE L1 -4932 1273 932 2584 196 12 24 chr2 8475547 8476058 -242211796 - MLT1D LTR MaLR 0 505 1 630 263 84 49 chr2 8476058 8476133 -242211721 - L1MEc LINE L1 -5273 932 861 515 320 44 58 chr2 8476574 8476918 -242210936 - L2 LINE L2 -6 3266 2928 1597 142 0 28 chr2 8478617 8478870 -242208984 - AluJb SINE Alu -9 303 58 1873 152 3 3 chr2 8479814 8480103 -242207751 + AluJb SINE Alu 1 289 -23 409 278 44 58 chr2 8481125 8481330 -242206524 - MIR SINE MIR -2 260 59 1026 193 111 50 chr2 8481332 8481612 -242206242 - L1ME3A LINE L1 -1 6169 5873 1080 240 130 22 chr2 8481614 8482068 -242205786 - L1ME3A LINE L1 -1155 4991 4489 1667 149 0 0 chr2 8482068 8482323 -242205531 - AluSx SINE Alu -2 310 56 2286 257 89 40 chr2 8482423 8482494 -242205360 - L1ME3A LINE L1 -2576 3570 3504 2241 102 0 0 chr2 8482494 8482804 -242205050 - AluSg SINE Alu 0 310 1 2286 257 89 40 chr2 8482804 8482954 -242204900 - L1ME3A LINE L1 -2642 3504 3363 2580 61 0 13 chr2 8482954 8483267 -242204587 - AluY SINE Alu -2 309 1 2286 257 89 40 chr2 8483267 8483518 -242204336 - L1ME3A LINE L1 -2783 3363 3126 1217 152 46 112 chr2 8483518 8483693 -242204161 - AluSq SINE Alu -9 304 158 207 0 0 0 chr2 8483693 8483716 -242204138 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1217 152 46 112 chr2 8483716 8483863 -242203991 - AluSq SINE Alu -155 158 3 2286 257 89 40 chr2 8483863 8484596 -242203258 - L1ME3A LINE L1 -3020 3126 2303 608 192 8 0 chr2 8484644 8484774 -242203080 - L1M4 LINE L1 -2154 3992 3862 203 286 62 54 chr2 8484809 8484921 -242202933 - L2 LINE L2 0 3272 3160 981 146 19 13 chr2 8485391 8485726 -242202128 + FRAM SINE Alu 1 332 0 205 237 0 0 chr2 8485726 8485764 -242202090 + polypurine Low_complexity Low_complexity 3 40 0 2370 90 0 0 chr2 8486918 8487206 -242200648 + AluSx SINE Alu 1 288 -24 189 196 0 0 chr2 8487810 8487856 -242199998 + (CCA)n Simple_repeat Simple_repeat 2 47 0 660 192 0 17 chr2 8489714 8489886 -242197968 + (TG)n Simple_repeat Simple_repeat 2 170 0 245 263 219 53 chr2 8490115 8490229 -242197625 - L2 LINE L2 0 3272 3140 259 324 36 27 chr2 8491443 8491554 -242196300 - MIR SINE MIR -70 192 81 2035 151 20 0 chr2 8492312 8492610 -242195244 + AluJb SINE Alu 2 305 -7 2295 122 0 0 chr2 8493348 8493642 -242194212 + AluSx SINE Alu 1 294 -18 407 247 77 71 chr2 8494016 8494186 -242193668 - MIR SINE MIR -61 201 31 672 325 40 4 chr2 8494441 8494693 -242193161 + MIR SINE MIR 1 261 -1 2116 180 62 5 chr2 8494778 8495211 -242192643 - MER65C LTR ERV1 -2 459 2 2406 96 0 0 chr2 8496782 8497085 -242190769 + AluSx SINE Alu 1 303 -9 414 262 51 98 chr2 8497799 8498013 -242189841 + MIR SINE MIR 3 206 -56 284 235 15 15 chr2 8498789 8498852 -242189002 - MIR SINE MIR -36 226 164 450 289 94 25 chr2 8498852 8499076 -242188778 + MIR SINE MIR 3 239 -23 189 264 125 14 chr2 8499094 8499166 -242188688 - MIR SINE MIR -123 139 60 701 293 173 17 chr2 8500923 8501340 -242186514 + L1ME3A LINE L1 5433 5914 -256 2088 154 0 0 chr2 8501435 8501741 -242186113 + AluJb SINE Alu 1 306 -6 1835 103 107 11 chr2 8503600 8503897 -242183957 + AluSx SINE Alu 2 312 0 579 299 83 25 chr2 8503909 8504150 -242183704 + MIR SINE MIR 8 262 0 389 319 187 20 chr2 8504815 8505413 -242182441 + L2 LINE L2 2034 2731 -583 237 243 0 0 chr2 8505497 8505604 -242182250 + CT-rich Low_complexity Low_complexity 4 110 0 222 273 210 49 chr2 8506830 8506882 -242180972 + MIR SINE MIR 96 138 -124 2268 97 60 31 chr2 8506882 8507234 -242180620 + THE1B LTR MaLR 3 364 0 222 273 210 49 chr2 8507234 8507324 -242180530 + MIR SINE MIR 138 261 -1 1091 203 37 67 chr2 8507397 8507670 -242180184 + L1ME2 LINE L1 5643 5907 -257 1848 184 23 3 chr2 8507670 8507975 -242179879 - AluJb SINE Alu -1 311 1 1091 203 37 67 chr2 8507975 8508048 -242179806 + L1ME2 LINE L1 5907 5981 -183 396 338 29 0 chr2 8508302 8508438 -242179416 - MIR SINE MIR -10 252 113 381 227 58 138 chr2 8509098 8509184 -242178670 - L1ME LINE L1 -429 5692 5601 1952 171 0 0 chr2 8509184 8509489 -242178365 - AluJo SINE Alu -2 310 6 381 227 58 138 chr2 8509489 8509627 -242178227 - L1ME LINE L1 -520 5601 5486 2230 99 0 7 chr2 8509816 8510108 -242177746 - AluY SINE Alu -21 290 1 201 176 0 0 chr2 8510223 8510257 -242177597 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 580 273 64 11 chr2 8510345 8510532 -242177322 - MIR SINE MIR -28 234 38 441 286 67 0 chr2 8510579 8510698 -242177156 + MIR SINE MIR 23 149 -113 2294 105 3 0 chr2 8510887 8511191 -242176663 + AluSq SINE Alu 1 305 -8 2018 137 6 26 chr2 8511712 8512025 -242175829 - AluJo SINE Alu -5 307 1 353 203 0 14 chr2 8512583 8512652 -242175202 + MIR3 SINE MIR 89 156 -52 1698 228 13 51 chr2 8512991 8513499 -242174355 - L1PA16 LINE L1 -1 6165 5706 2145 147 0 3 chr2 8513516 8513823 -242174031 + AluSx SINE Alu 1 306 -6 515 242 204 8 chr2 8513984 8514224 -242173630 - L1ME3A LINE L1 -219 5951 5665 1898 185 0 0 chr2 8515552 8515854 -242172000 + AluJb SINE Alu 6 307 -5 2295 100 0 38 chr2 8515909 8516229 -242171625 + AluSq SINE Alu 1 308 -5 189 74 0 0 chr2 8516255 8516282 -242171572 + (CA)n Simple_repeat Simple_repeat 2 28 0 1121 158 30 0 chr2 8516620 8516823 -242171031 + MER2 DNA MER2_type 3 211 -134 1792 141 11 0 chr2 8516833 8517096 -242170758 - AluJb SINE Alu -5 307 42 186 43 0 0 chr2 8517889 8517912 -242169942 + (A)n Simple_repeat Simple_repeat 1 23 0 284 152 0 0 chr2 8517933 8517979 -242169875 - L2 LINE L2 0 3313 3268 214 278 178 0 chr2 8518842 8518932 -242168922 - L2 LINE L2 -1 3312 3207 2076 128 0 16 chr2 8519245 8519550 -242168304 - AluSx SINE Alu -12 300 1 28 0 0 0 chr2 8519907 8519935 -242167919 + AT_rich Low_complexity Low_complexity 1 28 0 783 133 0 0 chr2 8519935 8520040 -242167814 - FLAM_C SINE Alu -25 118 14 1297 266 64 21 chr2 8520062 8520498 -242167356 - MLT1F LTR MaLR 0 542 88 1062 182 9 78 chr2 8520498 8520729 -242167125 - AluJo SINE Alu -22 290 76 1930 203 19 7 chr2 8520739 8521158 -242166696 - L1MB4 LINE L1 -4 6176 5753 245 293 0 40 chr2 8521159 8521258 -242166596 - MLT1F LTR MaLR -444 98 4 237 337 105 0 chr2 8521286 8521381 -242166473 + L2 LINE L2 3186 3290 -23 286 197 15 45 chr2 8521543 8521609 -242166245 - MIR3 SINE MIR -18 190 127 547 218 0 8 chr2 8521619 8521743 -242166111 - MLT1C LTR MaLR -8 459 337 942 194 90 18 chr2 8521769 8522067 -242165787 - MLT1C LTR MaLR -155 412 85 257 189 0 0 chr2 8522084 8522137 -242165717 - Alu SINE Alu 0 308 256 204 313 109 0 chr2 8522719 8522847 -242165007 - L2 LINE L2 -274 2998 2857 889 214 92 56 chr2 8523433 8523792 -242164062 - L1MD2 LINE L1 -1 6358 5987 180 0 0 0 chr2 8523800 8523820 -242164034 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 401 24 0 176 chr2 8523820 8523858 -242163996 - MER41A LTR ERV1 -89 465 448 2220 94 37 13 chr2 8523858 8524157 -242163697 + AluSx SINE Alu 3 308 -4 401 24 0 176 chr2 8524157 8524198 -242163656 - MER41A LTR ERV1 -106 448 401 2089 206 20 15 chr2 8524203 8524660 -242163194 - L1MD2 LINE L1 -465 5894 5436 28 0 0 0 chr2 8526672 8526700 -242161154 + GC_rich Low_complexity Low_complexity 1 28 0 245 197 15 15 chr2 8527181 8527247 -242160607 + (CCG)n Simple_repeat Simple_repeat 3 68 0 30 97 0 0 chr2 8527269 8527362 -242160492 + GC_rich Low_complexity Low_complexity 1 93 0 183 108 216 0 chr2 8527605 8527642 -242160212 + MIR SINE MIR 210 254 -8 856 115 122 22 chr2 8527789 8527928 -242159926 - AluJb SINE Alu -159 153 1 3289 200 33 26 chr2 8528242 8528839 -242159015 + MER44D DNA MER2_type 1 477 -2010 1927 153 27 0 chr2 8528839 8529139 -242158715 + AluJb SINE Alu 1 308 -4 3289 200 33 26 chr2 8529139 8529261 -242158593 + MER44D DNA MER2_type 477 597 -8 981 192 52 5 chr2 8529460 8529653 -242158201 + AluJb SINE Alu 96 297 -15 247 240 93 0 chr2 8529803 8529878 -242157976 + MIR SINE MIR 113 194 -68 586 259 58 0 chr2 8530170 8530344 -242157510 + L1ME LINE L1 3850 4033 -2113 2510 80 0 0 chr2 8530593 8530893 -242156961 - AluY SINE Alu -11 300 1 418 121 0 0 chr2 8530894 8530960 -242156894 - MSTC LTR MaLR -66 362 297 343 108 15 62 chr2 8530941 8531006 -242156848 - MSTC LTR MaLR -366 62 1 * 426 315 70 38 chr2 8531032 8531195 -242156659 + L1ME4a LINE L1 5696 5869 -252 2159 97 34 27 chr2 8531195 8531493 -242156361 - AluSq SINE Alu -13 300 1 426 315 70 38 chr2 8531493 8531542 -242156312 + L1ME4a LINE L1 5869 5915 -206 2331 97 7 3 chr2 8532075 8532384 -242155470 - AluSg SINE Alu 0 310 1 277 282 42 6 chr2 8532386 8532550 -242155304 - LTR16C LTR ERVL -50 428 271 320 311 29 10 chr2 8532689 8532792 -242155062 + L1ME LINE L1 4960 5064 -1082 546 288 55 20 chr2 8532838 8533176 -242154678 + L1ME LINE L1 5293 5645 -476 2125 125 0 3 chr2 8533322 8533610 -242154244 - AluSx SINE Alu -25 287 1 898 82 0 0 chr2 8533619 8533729 -242154125 - AluSg/x SINE Alu -5 304 195 2744 26 0 3 chr2 8534266 8534571 -242153283 + AluY SINE Alu 1 304 -7 2259 89 43 6 chr2 8534574 8534924 -242152930 + L1MA3 LINE L1 5943 6305 0 236 204 204 19 chr2 8535544 8535652 -242152202 - MER3 DNA MER1_type 0 209 82 883 149 105 88 chr2 8535947 8536242 -242151612 + MER58D DNA MER1_type 4 303 -83 195 42 0 0 chr2 8536370 8536394 -242151460 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 2578 47 3 3 chr2 8536617 8536918 -242150936 - AluY SINE Alu -10 301 1 1793 146 30 4 chr2 8536986 8537253 -242150601 - AluSx SINE Alu -38 274 1 22 0 0 0 chr2 8537595 8537617 -242150237 + AT_rich Low_complexity Low_complexity 1 22 0 211 305 211 21 chr2 8539319 8539414 -242148440 - L2 LINE L2 -5 3267 3155 288 253 64 56 chr2 8539417 8539586 -242148268 - MIR SINE MIR -62 146 19 241 309 44 69 chr2 8540353 8540557 -242147297 + MIR3 SINE MIR 10 208 0 268 270 63 56 chr2 8540978 8541104 -242146750 - MIR3 SINE MIR -67 141 15 364 271 27 38 chr2 8541967 8542100 -242145754 + MIR SINE MIR 50 179 -59 271 246 16 0 chr2 8542301 8542362 -242145492 + L2 LINE L2 3208 3269 -3 2502 53 0 0 chr2 8543099 8543407 -242144447 - AluY SINE Alu 0 308 1 1634 173 30 23 chr2 8544017 8544317 -242143537 + AluSg SINE Alu 1 302 -8 231 236 14 42 chr2 8545026 8545098 -242142756 + MIR SINE MIR 37 106 -102 464 239 29 51 chr2 8545757 8545895 -242141959 + L2 LINE L2 3167 3301 -12 237 241 0 17 chr2 8545843 8545901 -242141953 + MIR SINE MIR 206 262 0 * 183 320 77 13 chr2 8546064 8546142 -242141712 + MIR SINE MIR 31 113 -95 1697 145 54 30 chr2 8546287 8546584 -242141270 - AluJb SINE Alu -8 304 1 1591 192 24 3 chr2 8546844 8547135 -242140719 - AluJo SINE Alu -15 297 1 328 305 250 6 chr2 8547572 8547736 -242140118 + MIR SINE MIR 47 250 -12 1887 113 8 0 chr2 8547969 8548226 -242139628 - AluSx SINE Alu -53 259 1 466 272 63 19 chr2 8548341 8548499 -242139355 - MLT1J2 LTR MaLR -284 166 2 545 247 97 53 chr2 8548499 8548726 -242139128 + L2 LINE L2 3045 3281 -32 183 80 0 0 chr2 8549064 8549089 -242138765 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 22 88 0 0 chr2 8549236 8549293 -242138561 + AT_rich Low_complexity Low_complexity 1 57 0 313 242 57 117 chr2 8549301 8549397 -242138457 + L1MC5 LINE L1 7688 7788 -173 2067 120 0 46 chr2 8549397 8549688 -242138166 + AluSq SINE Alu 5 281 -32 231 36 0 0 chr2 8549688 8549716 -242138138 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2067 120 0 46 chr2 8549716 8549748 -242138106 + AluSq SINE Alu 281 313 0 313 242 57 117 chr2 8549748 8549915 -242137939 + L1MC5 LINE L1 7788 7935 -26 372 343 12 58 chr2 8550241 8550357 -242137497 - MIR3 SINE MIR -14 194 87 2277 115 3 10 chr2 8550357 8550669 -242137185 + AluSx SINE Alu 1 310 -2 372 343 12 58 chr2 8550669 8550724 -242137130 - MIR3 SINE MIR -121 87 31 1895 150 20 3 chr2 8551086 8551380 -242136474 - AluJb SINE Alu -13 299 1 442 316 102 45 chr2 8551398 8551642 -242136212 - MIR SINE MIR -4 258 1 213 108 0 0 chr2 8552147 8552184 -242135670 + (CA)n Simple_repeat Simple_repeat 1 37 0 2098 205 75 0 chr2 8552318 8552801 -242135053 + L1MB7 LINE L1 5657 6175 -9 341 253 175 32 chr2 8553022 8553176 -242134678 + MIR SINE MIR 27 202 -60 512 247 26 74 chr2 8553571 8553761 -242134093 - MIR SINE MIR -76 186 6 707 206 65 35 chr2 8553865 8554035 -242133819 - MER45A DNA AcHobo 0 178 4 522 103 0 23 chr2 8554699 8554786 -242133068 + MLT1C LTR MaLR 3 87 -380 295 137 0 0 chr2 8554999 8555050 -242132804 + Alu SINE Alu 246 296 -5 286 279 51 0 chr2 8556931 8557010 -242130844 - MIR SINE MIR -84 178 96 275 293 49 24 chr2 8558150 8558273 -242129581 + MIR SINE MIR 86 211 -51 822 133 0 8 chr2 8558817 8558937 -242128917 - FLAM_A SINE Alu -12 121 3 546 237 201 16 chr2 8559179 8559373 -242128481 - MIR SINE MIR -5 257 28 1868 175 3 0 chr2 8560700 8561015 -242126839 + AluSx SINE Alu 1 316 0 2363 98 0 0 chr2 8561808 8562104 -242125750 + AluSc SINE Alu 1 296 -13 633 275 55 22 chr2 8562170 8562352 -242125502 - MIR SINE MIR -1 261 74 355 267 48 0 chr2 8563213 8563318 -242124536 + MIR SINE MIR 56 165 -97 412 259 6 6 chr2 8563803 8563929 -242123925 - MIR SINE MIR -66 142 46 479 241 99 0 chr2 8564605 8564746 -242123108 + MLT1F1 LTR MaLR 411 565 -2 2366 94 0 3 chr2 8564901 8565199 -242122655 + AluSx SINE Alu 1 297 -15 2233 107 23 3 chr2 8565972 8566271 -242121583 + AluSp SINE Alu 1 305 -8 261 83 0 0 chr2 8566271 8566307 -242121547 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 690 253 116 58 chr2 8567477 8567927 -242119927 + MLT1J LTR MaLR 28 503 -8 387 329 36 7 chr2 8567980 8568117 -242119737 - MIR3 SINE MIR -10 198 58 460 230 112 37 chr2 8568129 8568169 -242119685 + LTR33 LTR ERVL 16 52 -469 2046 109 31 7 chr2 8568169 8568462 -242119392 - AluSg1 SINE Alu -9 300 1 460 230 112 37 chr2 8568462 8568582 -242119272 + LTR33 LTR ERVL 52 188 -333 518 191 118 7 chr2 8569333 8569469 -242118385 - MER63 DNA MER1_type -53 783 7 217 333 53 0 chr2 8569537 8569612 -242118242 - MER5A DNA MER1_type -1 188 110 614 215 0 6 chr2 8569870 8570042 -242117812 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 1023 81 0 0 chr2 8570157 8570281 -242117573 + AluSg/x SINE Alu 182 305 -7 322 218 24 135 chr2 8570464 8570634 -242117220 + LTR67 LTR ERVL 5 155 -402 462 246 42 7 chr2 8570794 8570936 -242116918 + LTR67 LTR ERVL 386 532 -25 2284 108 0 10 chr2 8571114 8571419 -242116435 + AluSg SINE Alu 3 304 -6 330 286 40 32 chr2 8571432 8571558 -242116296 - MER5A DNA MER1_type -19 170 44 329 234 175 44 chr2 8571436 8571573 -242116281 + MER5A DNA MER1_type 35 189 0 * 275 199 109 33 chr2 8571915 8572046 -242115808 - LTR33A LTR ERVL -287 234 69 227 306 122 0 chr2 8572165 8572263 -242115591 - MIR SINE MIR -69 139 30 412 230 11 46 chr2 8572693 8572780 -242115074 - MIR3 SINE MIR -54 154 71 598 111 0 0 chr2 8573114 8573204 -242114650 - MER41A LTR ERV1 0 554 465 4603 91 11 20 chr2 8574283 8574924 -242112930 - MER41B LTR ERV1 0 635 1 303 225 42 0 chr2 8575083 8575154 -242112700 + MER105 DNA DNA 1 74 -130 257 246 48 16 chr2 8575179 8575305 -242112549 + (CATA)n Simple_repeat Simple_repeat 2 131 0 680 269 52 70 chr2 8575308 8575646 -242112208 - LTR16A LTR ERVL -48 402 70 3266 160 17 91 chr2 8575646 8576391 -242111463 + LTR8 LTR ERV1 1 690 -1 680 269 52 70 chr2 8576391 8576439 -242111415 - LTR16A LTR ERVL -380 70 23 2444 193 77 50 chr2 8576462 8576821 -242111033 + L1ME1 LINE L1 4614 4962 -1184 748 157 0 25 chr2 8576821 8576966 -242110888 - FLAM_C SINE Alu 0 142 1 2444 193 77 50 chr2 8576966 8577366 -242110488 + L1ME1 LINE L1 4962 5396 -750 1712 199 10 16 chr2 8577360 8577746 -242110108 + L1ME1 LINE L1 5615 5998 -168 * 2172 130 0 3 chr2 8577859 8578160 -242109694 + AluSx SINE Alu 1 300 -12 2308 91 10 7 chr2 8578160 8578467 -242109387 + AluSg1 SINE Alu 1 308 -1 1639 188 57 39 chr2 8578621 8579004 -242108850 - MLT1B LTR MaLR 0 390 1 236 245 19 19 chr2 8579046 8579099 -242108755 + MIR SINE MIR 23 75 -133 341 229 73 68 chr2 8579134 8579326 -242108528 + MER117 DNA MER1_type 2 194 -3 2149 129 0 10 chr2 8579573 8579876 -242107978 + AluSx SINE Alu 1 300 -12 342 234 53 0 chr2 8579944 8580038 -242107816 - MER20 DNA MER1_type -57 162 64 400 173 146 45 chr2 8580399 8580509 -242107345 + MIR SINE MIR 29 149 -113 288 212 8 127 chr2 8580514 8580583 -242107271 + MLT1J LTR MaLR 1 53 -458 1924 156 0 0 chr2 8580583 8580913 -242106941 - AluSx SINE Alu 0 330 1 288 212 8 127 chr2 8580913 8580960 -242106894 + MLT1J LTR MaLR 53 104 -407 536 254 110 76 chr2 8580974 8581265 -242106589 + MLT1J LTR MaLR 205 505 -6 23 0 0 0 chr2 8581405 8581428 -242106426 + AT_rich Low_complexity Low_complexity 1 23 0 185 288 125 0 chr2 8581772 8581852 -242106002 - MIR SINE MIR -52 210 121 534 305 6 0 chr2 8581987 8582154 -242105700 - MER119 DNA MER1_type -290 293 126 23 33 0 0 chr2 8582261 8582291 -242105563 + AT_rich Low_complexity Low_complexity 1 30 0 676 152 27 18 chr2 8582291 8582403 -242105451 - FLAM_A SINE Alu -18 124 12 313 247 25 0 chr2 8582412 8582493 -242105361 - MER119 DNA MER1_type -496 87 5 2303 105 0 3 chr2 8582736 8583041 -242104813 - AluSq SINE Alu -9 304 1 524 216 0 8 chr2 8583113 8583247 -242104607 + (TG)n Simple_repeat Simple_repeat 2 134 0 1004 187 44 4 chr2 8583391 8583642 -242104212 + L1 LINE L1 4247 4507 -1639 422 314 24 8 chr2 8583720 8583844 -242104010 + HAL1 LINE L1 1255 1380 -1127 2201 126 0 3 chr2 8583849 8584150 -242103704 + AluSx SINE Alu 3 302 -10 427 169 79 11 chr2 8584253 8584342 -242103512 - LTR54 LTR ERV1 -373 137 43 341 163 174 0 chr2 8584343 8584435 -242103419 + HAL1 LINE L1 2097 2204 -303 472 214 0 0 chr2 8584454 8584543 -242103311 - LTR49 LTR ERV1 0 595 507 534 138 0 0 chr2 8584553 8584633 -242103221 + FLAM SINE Alu 42 121 -22 2106 121 29 10 chr2 8584657 8584963 -242102891 - AluSx SINE Alu 0 312 1 708 264 110 35 chr2 8585006 8585113 -242102741 - LTR48B LTR ERV1 -150 494 397 3500 128 56 0 chr2 8585113 8585612 -242102242 - MER1A DNA MER1_type 0 527 1 708 264 110 35 chr2 8585612 8585822 -242102032 - LTR48B LTR ERV1 -247 397 153 4550 57 37 11 chr2 8585822 8586838 -242101016 - MER11A LTR ERVK 0 1266 1 443 75 0 50 chr2 8586838 8586917 -242100937 - LTR48B LTR ERV1 -486 158 84 365 226 34 124 chr2 8587076 8587168 -242100686 + HAL1 LINE L1 2260 2359 -148 2063 155 0 0 chr2 8587168 8587458 -242100396 + AluJb SINE Alu 1 290 -22 365 226 34 124 chr2 8587458 8587631 -242100223 + HAL1 LINE L1 2359 2501 -6 2246 131 3 0 chr2 8587692 8587997 -242099857 + AluSx SINE Alu 1 306 -6 1093 261 65 21 chr2 8588137 8588462 -242099392 + MER58B DNA MER1_type 1 339 -2 463 325 33 0 chr2 8588495 8588646 -242099208 + MIR SINE MIR 51 206 -56 2527 80 0 0 chr2 8588997 8589299 -242098555 + AluSq SINE Alu 1 302 -11 242 254 58 56 chr2 8590043 8590215 -242097639 - MIR SINE MIR -62 146 17 354 23 0 0 chr2 8590822 8590865 -242096989 + (CA)n Simple_repeat Simple_repeat 2 44 0 423 279 11 49 chr2 8591926 8592109 -242095745 + (TATG)n Simple_repeat Simple_repeat 3 178 0 2127 135 7 0 chr2 8592731 8593035 -242094819 + AluSx SINE Alu 1 306 -6 709 265 109 73 chr2 8593071 8593512 -242094342 + L1MC4 LINE L1 7444 7900 -142 534 295 51 6 chr2 8593848 8594004 -242093850 + MIR SINE MIR 26 188 -74 300 239 0 28 chr2 8594067 8594149 -242093705 - MER5A DNA MER1_type -23 166 76 426 311 48 6 chr2 8594179 8594346 -242093508 + L2 LINE L2 2881 3054 -218 389 266 42 63 chr2 8594484 8594627 -242093227 - MIR SINE MIR -102 160 21 2348 93 7 3 chr2 8594714 8595016 -242092838 - AluSx SINE Alu -9 303 1 198 283 19 0 chr2 8596101 8596154 -242091700 + L2 LINE L2 2156 2209 -1105 2414 86 0 16 chr2 8596177 8596491 -242091363 + AluSx SINE Alu 1 309 -3 509 21 62 10 chr2 8596574 8596670 -242091184 + (CA)n Simple_repeat Simple_repeat 1 101 0 3857 96 26 100 chr2 8596670 8597387 -242090467 - MER4A LTR ERV1 0 664 1 240 35 0 0 chr2 8597387 8597416 -242090438 + (CA)n Simple_repeat Simple_repeat 2 30 0 330 313 104 21 chr2 8597662 8597806 -242090048 + MIR SINE MIR 22 177 -85 592 254 53 30 chr2 8597927 8598096 -242089758 + MIR SINE MIR 68 240 -22 183 300 169 53 chr2 8598755 8599092 -242088762 + L2 LINE L2 2213 2588 -726 238 191 0 0 chr2 8599130 8599177 -242088677 + MER58B DNA MER1_type 295 341 0 245 303 134 39 chr2 8599608 8599915 -242087939 - L1ME3A LINE L1 -223 5947 5612 255 247 92 53 chr2 8600001 8600163 -242087691 - L1ME3A LINE L1 -704 5452 5319 277 171 43 29 chr2 8600263 8600333 -242087521 - Charlie4 DNA MER1_type -1879 82 12 27 29 0 0 chr2 8600404 8600438 -242087416 + AT_rich Low_complexity Low_complexity 1 34 0 2043 103 19 39 chr2 8600974 8601145 -242086709 - AluJb SINE Alu -8 304 140 2386 108 0 0 chr2 8601145 8601452 -242086402 - AluSx SINE Alu -5 307 1 2043 103 19 39 chr2 8601452 8601590 -242086264 - AluJb SINE Alu -172 140 1 399 278 202 15 chr2 8601605 8601803 -242086051 - MIR SINE MIR -8 254 20 2468 75 0 3 chr2 8602299 8602605 -242085249 - AluY SINE Alu -6 305 1 201 264 99 11 chr2 8602652 8602743 -242085111 - MIR SINE MIR -12 250 152 358 202 58 18 chr2 8603309 8603437 -242084417 + MIR3 SINE MIR 60 196 -12 360 296 139 12 chr2 8604011 8604183 -242083671 + MIR3 SINE MIR 15 208 0 4596 173 54 22 chr2 8604401 8606001 -242081853 - L1MB7 LINE L1 -25 6159 4503 659 143 0 0 chr2 8606001 8606106 -242081748 - AluSg/x SINE Alu 0 309 205 280 156 0 6 chr2 8606106 8606165 -242081689 - Alu SINE Alu -263 40 1 1227 218 29 35 chr2 8606165 8606479 -242081375 - L1MB7 LINE L1 -1664 4482 4169 2292 48 44 24 chr2 8606479 8606773 -242081081 - AluY SINE Alu -5 306 7 1227 218 29 35 chr2 8606773 8606802 -242081052 - L1MB7 LINE L1 -1977 4169 4141 217 306 148 0 chr2 8609014 8609122 -242078732 + L2 LINE L2 3142 3265 -7 239 204 41 0 chr2 8609450 8609499 -242078355 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 544 191 89 64 chr2 8609762 8609919 -242077935 + MER58C DNA MER1_type 43 203 -12 221 250 0 0 chr2 8611177 8611221 -242076633 + L3 LINE CR1 1532 1575 -2 218 308 63 25 chr2 8612235 8612368 -242075486 - MIR SINE MIR -65 143 18 502 326 39 11 chr2 8617218 8617396 -242070458 + L2 LINE L2 3130 3312 -1 309 283 18 53 chr2 8618276 8618389 -242069465 + MIR SINE MIR 12 120 -142 * 672 216 88 66 chr2 8618388 8618521 -242069333 - MIR SINE MIR -5 257 115 2460 96 0 0 chr2 8618521 8618824 -242069030 + AluSx SINE Alu 1 303 -9 672 216 88 66 chr2 8618824 8618917 -242068937 - MIR SINE MIR -147 115 26 276 322 67 31 chr2 8618865 8619089 -242068765 + MIR SINE MIR 7 242 -20 * 715 231 15 5 chr2 8620589 8620788 -242067066 + MER20 DNA MER1_type 19 219 0 21 0 0 0 chr2 8621319 8621340 -242066514 + AT_rich Low_complexity Low_complexity 1 21 0 205 184 0 0 chr2 8621358 8621396 -242066458 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1641 146 4 4 chr2 8622012 8622266 -242065588 + AluJo SINE Alu 1 254 -58 216 359 35 78 chr2 8622335 8622416 -242065438 - L2 LINE L2 -538 2776 2693 2413 90 3 13 chr2 8622416 8622728 -242065126 + AluSg SINE Alu 1 309 -1 216 359 35 78 chr2 8622728 8622877 -242064977 - L2 LINE L2 -621 2693 2556 1229 160 9 5 chr2 8622912 8623124 -242064730 - MER4E LTR ERV1 0 779 567 * 1718 141 63 30 chr2 8623118 8623451 -242064403 - MER4B LTR ERV1 -266 344 1 268 158 368 11 chr2 8623456 8623551 -242064303 - MIR SINE MIR -66 196 68 529 193 28 0 chr2 8624583 8624692 -242063162 - MIR SINE MIR -129 133 22 2166 123 41 0 chr2 8625813 8626155 -242061699 + THE1B LTR MaLR 2 357 -7 264 273 10 30 chr2 8626220 8626319 -242061535 + MLT1K LTR MaLR 492 588 0 241 263 14 111 chr2 8627049 8627106 -242060748 + MIR SINE MIR 11 56 -152 1676 192 0 10 chr2 8627106 8627414 -242060440 - AluJo SINE Alu -7 305 1 241 263 14 111 chr2 8627414 8627477 -242060377 + MIR SINE MIR 56 124 -84 872 159 0 0 chr2 8627644 8627776 -242060078 + AluJo SINE Alu 2 133 -169 2392 89 86 9 chr2 8627790 8628128 -242059726 + THE1B LTR MaLR 1 364 0 858 160 0 75 chr2 8628130 8628276 -242059578 + AluJo SINE Alu 140 261 -174 1079 73 11 17 chr2 8628276 8628454 -242059400 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 858 160 0 75 chr2 8628454 8628617 -242059237 + AluJo SINE Alu 261 435 0 255 266 152 0 chr2 8629860 8629939 -242057915 + MIR SINE MIR 57 147 -61 2043 139 3 19 chr2 8629958 8630268 -242057586 + AluSx SINE Alu 1 305 -7 194 244 24 0 chr2 8630277 8630318 -242057536 + MIR SINE MIR 218 259 -3 2313 71 3 3 chr2 8630872 8631187 -242056667 + AluY SINE Alu 1 315 0 1935 146 3 54 chr2 8631194 8631510 -242056344 + AluSx SINE Alu 1 300 -12 2382 105 0 3 chr2 8631754 8632067 -242055787 + AluSx SINE Alu 1 312 0 1576 175 91 4 chr2 8632123 8632397 -242055457 + AluJb SINE Alu 1 298 -14 190 333 63 16 chr2 8633170 8633296 -242054558 + MIR SINE MIR 120 251 -11 242 71 0 24 chr2 8633298 8633340 -242054514 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 459 258 42 72 chr2 8633648 8633815 -242054039 - MER91B DNA MER1_type -11 179 18 1886 158 14 0 chr2 8633860 8634152 -242053702 + AluJo SINE Alu 1 296 -16 436 296 206 7 chr2 8634700 8635001 -242052853 + L2 LINE L2 2912 3272 0 459 316 56 71 chr2 8635083 8635476 -242052378 - L2 LINE L2 -508 2806 2420 2462 73 3 0 chr2 8636832 8637132 -242050722 - AluY SINE Alu -10 301 1 2103 137 20 7 chr2 8637140 8637440 -242050414 - AluJb SINE Alu -8 304 1 206 265 20 0 chr2 8638235 8638284 -242049570 + L2 LINE L2 3194 3243 -29 639 39 0 0 chr2 8638666 8638744 -242049110 + (TC)n Simple_repeat Simple_repeat 1 78 0 4946 108 3 3 chr2 8638995 8639682 -242048172 - L1PA10 LINE L1 -1 6167 5481 2150 128 10 6 chr2 8639682 8639994 -242047860 - AluSp SINE Alu 0 313 1 2091 131 3 10 chr2 8640082 8640388 -242047466 - AluSq SINE Alu -7 306 3 245 285 61 144 chr2 8640432 8640695 -242047159 - MIR SINE MIR -2 260 20 1746 157 51 40 chr2 8640765 8640824 -242047030 - L1MB8 LINE L1 -9 6169 6112 1671 194 3 7 chr2 8640824 8641134 -242046720 + AluJo SINE Alu 1 309 -3 1746 157 51 40 chr2 8641134 8641449 -242046405 - L1MB8 LINE L1 -66 6112 5791 2510 169 38 0 chr2 8641450 8641893 -242045961 + MLT1C LTR MaLR 3 462 -5 2852 149 45 79 chr2 8641893 8642208 -242045646 - L1MB8 LINE L1 -401 5783 5459 2263 117 42 28 chr2 8642208 8642419 -242045435 - THE1B LTR MaLR 0 364 144 1860 140 0 13 chr2 8642419 8642727 -242045127 + AluSc SINE Alu 1 304 -5 2263 117 42 28 chr2 8642727 8642874 -242044980 - THE1B LTR MaLR -220 144 1 2852 149 45 79 chr2 8642874 8643114 -242044740 - L1MB8 LINE L1 -725 5459 5262 2120 114 0 16 chr2 8643114 8643431 -242044423 + AluJb SINE Alu 1 312 0 2852 149 45 79 chr2 8643431 8643560 -242044294 - L1MB8 LINE L1 -922 5262 5130 281 300 9 55 chr2 8643587 8643697 -242044157 + L2 LINE L2 2642 2746 -568 574 40 0 0 chr2 8643713 8643787 -242044067 + AluJb SINE Alu 209 282 -30 281 26 0 26 chr2 8643790 8643829 -242044025 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 991 284 81 45 chr2 8643861 8644344 -242043510 + L2 LINE L2 2812 3311 -2 442 267 240 0 chr2 8644550 8644696 -242043158 - MER5A DNA MER1_type 0 189 9 328 266 55 37 chr2 8645042 8645151 -242042703 - L2 LINE L2 -4 3309 3199 240 377 51 0 chr2 8645519 8645657 -242042197 - L2 LINE L2 -238 3034 2890 1260 204 96 16 chr2 8645767 8646081 -242041773 - MER58B DNA MER1_type -2 339 1 2615 177 33 124 chr2 8646643 8646976 -242040878 + MER63C DNA MER1_type 1 226 -834 2739 13 3 0 chr2 8646976 8647289 -242040565 + AluYb8 SINE Alu 1 314 -4 2615 177 33 124 chr2 8647289 8647718 -242040136 + MER63C DNA MER1_type 226 693 -237 344 256 13 0 chr2 8647724 8647802 -242040052 + MER63C DNA MER1_type 853 931 0 2480 58 0 0 chr2 8648203 8648513 -242039341 - AluY SINE Alu -1 310 1 228 107 18 36 chr2 8649069 8649125 -242038729 + (TTCTCC)n Simple_repeat Simple_repeat 5 59 0 21 0 0 0 chr2 8649125 8649146 -242038708 + AT_rich Low_complexity Low_complexity 1 21 0 1081 183 47 21 chr2 8649146 8649381 -242038473 - MER46C DNA MER2_type 0 338 98 212 245 0 0 chr2 8650729 8650778 -242037076 + CT-rich Low_complexity Low_complexity 3 51 0 201 304 52 61 chr2 8650923 8651038 -242036816 + MIR SINE MIR 23 136 -126 25 75 0 0 chr2 8651325 8651378 -242036476 + GC_rich Low_complexity Low_complexity 1 53 0 1529 77 5 0 chr2 8651534 8651729 -242036125 + AluSp SINE Alu 104 299 -14 214 200 0 0 chr2 8651927 8651967 -242035887 + T-rich Low_complexity Low_complexity 1 40 0 249 382 49 16 chr2 8652698 8652821 -242035033 - L2 LINE L2 -21 3251 3125 197 254 127 0 chr2 8653123 8653178 -242034676 + L2 LINE L2 2433 2494 -820 404 130 101 0 chr2 8653257 8653326 -242034528 - Charlie5 DNA MER1_type -2527 85 10 265 180 20 0 chr2 8653347 8653397 -242034457 + MER5A DNA MER1_type 42 92 -97 443 265 119 13 chr2 8653463 8653614 -242034240 - MER5B DNA MER1_type -11 167 1 * 1059 263 95 39 chr2 8653614 8654246 -242033608 - L2 LINE L2 -141 3172 2496 2160 108 0 6 chr2 8654783 8655097 -242032757 - AluSx SINE Alu 0 312 1 186 351 52 0 chr2 8655241 8655318 -242032536 - L2 LINE L2 -1 3312 3232 189 0 0 0 chr2 8655335 8655356 -242032498 + (A)n Simple_repeat Simple_repeat 1 21 0 726 202 74 15 chr2 8655429 8655543 -242032311 - Charlie4 DNA MER1_type -7 1954 1848 1415 166 109 22 chr2 8655543 8655863 -242031991 - MER7A DNA MER2_type 0 346 1 726 202 74 15 chr2 8655863 8655951 -242031903 - Charlie4 DNA MER1_type -113 1848 1740 180 0 0 0 chr2 8705955 8705975 -241981879 + (A)n Simple_repeat Simple_repeat 1 20 0 1760 146 42 17 chr2 8706605 8706892 -241980962 - AluJb SINE Alu -18 294 1 291 253 30 64 chr2 8707128 8707229 -241980625 + MIR SINE MIR 9 107 -101 2084 170 15 15 chr2 8707229 8707618 -241980236 + MLT1B LTR MaLR 1 389 -1 291 253 30 64 chr2 8707618 8707634 -241980220 + MIR SINE MIR 107 122 -86 561 221 69 35 chr2 8707783 8707928 -241979926 + MLT1E3 LTR MaLR 473 622 -2 2311 91 3 0 chr2 8708375 8708661 -241979193 + AluSp SINE Alu 1 287 -26 1669 175 27 3 chr2 8709633 8709925 -241977929 - AluJo SINE Alu 0 312 14 198 0 0 0 chr2 8710033 8710055 -241977799 + (T)n Simple_repeat Simple_repeat 1 22 0 2362 102 0 3 chr2 8710196 8710501 -241977353 - AluSg SINE Alu -6 304 1 209 228 0 35 chr2 8711181 8711238 -241976616 + C-rich Low_complexity Low_complexity 2 56 0 2029 125 10 29 chr2 8711507 8711818 -241976036 + AluSq SINE Alu 1 305 -8 223 253 46 46 chr2 8712101 8712188 -241975666 + L2 LINE L2 3167 3253 -19 491 249 166 16 chr2 8712212 8712405 -241975449 + MIR SINE MIR 4 225 -37 2323 113 0 0 chr2 8712507 8712808 -241975046 + AluSx SINE Alu 1 301 -11 1424 140 0 18 chr2 8713370 8713592 -241974262 + AluSg/x SINE Alu 74 291 -19 627 169 115 8 chr2 8713595 8713725 -241974129 - FAM SINE Alu -34 151 8 2271 149 95 2 chr2 8713735 8714158 -241973696 - L1MC1 LINE L1 -179 6154 5693 2418 93 10 0 chr2 8714162 8714472 -241973382 + AluSq SINE Alu 1 313 0 1723 124 30 65 chr2 8714475 8714647 -241973207 - L1MC1 LINE L1 -752 5592 5436 698 191 0 16 chr2 8714647 8714773 -241973081 - FLAM_A SINE Alu -9 124 1 1723 124 30 65 chr2 8714773 8714939 -241972915 - L1MC1 LINE L1 -908 5436 5266 28 0 0 0 chr2 8714943 8714971 -241972883 + AT_rich Low_complexity Low_complexity 1 28 0 857 137 0 8 chr2 8714971 8715095 -241972759 - AluJb SINE Alu -189 123 1 251 245 0 0 chr2 8715095 8715164 -241972690 - L1MC1 LINE L1 -870 5276 5208 1806 132 0 28 chr2 8715202 8715490 -241972364 + AluSx SINE Alu 31 310 -2 385 287 131 48 chr2 8715499 8715966 -241971888 + MLT1L LTR MaLR 6 615 0 832 247 133 7 chr2 8715969 8716277 -241971577 + HAL1 LINE L1 1423 1769 -738 189 0 0 0 chr2 8716964 8716985 -241970869 + (A)n Simple_repeat Simple_repeat 1 21 0 2044 131 0 3 chr2 8717459 8717781 -241970073 + AluSx SINE Alu 1 321 0 2011 128 6 39 chr2 8717889 8718201 -241969653 + AluSx SINE Alu 1 302 -10 929 164 30 0 chr2 8718517 8718682 -241969172 - AluJb SINE Alu -14 298 129 282 270 33 53 chr2 8719418 8719570 -241968284 - MER5B DNA MER1_type 0 178 30 2196 96 0 3 chr2 8720085 8720378 -241967476 - AluSx SINE Alu 0 312 21 811 166 13 19 chr2 8721057 8721081 -241966773 - AluJb SINE Alu -20 292 269 1767 170 70 23 chr2 8721081 8721511 -241966343 - LTR7 LTR ERV1 0 450 1 811 166 13 19 chr2 8721511 8721643 -241966211 - AluJb SINE Alu -43 269 137 292 80 40 40 chr2 8722029 8722079 -241965775 - L1MC5 LINE L1 -172 7789 7740 202 250 198 10 chr2 8722167 8722263 -241965591 - MIR SINE MIR -112 150 37 244 295 139 29 chr2 8724027 8724308 -241963546 + L1ME4a LINE L1 5282 5593 -528 2303 104 16 0 chr2 8724504 8724812 -241963042 - AluSq SINE Alu 0 313 1 521 265 56 38 chr2 8724884 8724946 -241962908 + L1ME4a LINE L1 5812 5871 -250 1336 162 116 8 chr2 8724946 8725205 -241962649 + AluJo SINE Alu 1 287 -25 521 265 56 38 chr2 8725205 8725429 -241962425 + L1ME4a LINE L1 5871 6103 -18 447 275 111 19 chr2 8725497 8725704 -241962150 - MIR SINE MIR -17 245 20 685 217 0 8 chr2 8726571 8726700 -241961154 + MER8 DNA MER2_type 112 239 0 2256 94 13 3 chr2 8726733 8727032 -241960822 - AluSx SINE Alu -8 304 3 497 283 53 0 chr2 8727211 8727363 -241960491 - MIR SINE MIR -84 178 19 955 158 22 27 chr2 8727963 8728146 -241959708 - AluJo SINE Alu -24 288 107 938 276 79 3 chr2 8729707 8730076 -241957778 + L1ME1 LINE L1 5550 5946 -220 1865 113 68 0 chr2 8730078 8730343 -241957511 + AluSx SINE Alu 1 283 -29 201 190 139 63 chr2 8731122 8731201 -241956653 - MIR3 SINE MIR -22 186 102 2203 120 0 3 chr2 8731252 8731552 -241956302 + AluSq SINE Alu 1 299 -14 1831 154 0 34 chr2 8731656 8731954 -241955900 + AluJo SINE Alu 1 288 -24 414 0 0 0 chr2 8732495 8732541 -241955313 + (TG)n Simple_repeat Simple_repeat 1 46 0 1101 175 159 36 chr2 8732566 8732817 -241955037 - AluJo SINE Alu -30 282 1 2456 76 3 0 chr2 8734378 8734682 -241953172 + AluSg SINE Alu 1 305 -5 1637 188 20 10 chr2 8734691 8734984 -241952870 + AluJb SINE Alu 1 296 -16 2155 109 3 16 chr2 8734984 8735296 -241952558 + AluSc SINE Alu 1 308 -1 2150 112 14 3 chr2 8735305 8735601 -241952253 + AluSc SINE Alu 2 300 -9 22 0 0 0 chr2 8736240 8736262 -241951592 + AT_rich Low_complexity Low_complexity 1 22 0 252 0 0 0 chr2 8736562 8736590 -241951264 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 263 216 49 59 chr2 8736863 8736965 -241950889 + L1MC4a LINE L1 5802 5902 -1906 23 0 0 0 chr2 8738362 8738385 -241949469 + AT_rich Low_complexity Low_complexity 1 23 0 998 133 96 21 chr2 8738407 8738595 -241949259 + Tigger2a DNA MER2_type 1 202 -232 948 172 17 22 chr2 8738595 8738775 -241949079 - AluJo SINE Alu -13 299 121 1205 117 40 85 chr2 8738775 8738941 -241948913 + Tigger2a DNA MER2_type 209 362 -2356 1376 177 89 7 chr2 8738941 8739212 -241948642 + AluJo SINE Alu 1 293 -19 1205 117 40 85 chr2 8739212 8739292 -241948562 + Tigger2a DNA MER2_type 362 444 0 1129 147 0 0 chr2 8739874 8740037 -241947817 + AluSg/x SINE Alu 135 297 -13 2000 134 0 3 chr2 8741234 8741539 -241946315 + AluSx SINE Alu 1 304 0 30 69 0 0 chr2 8741690 8741748 -241946106 + AT_rich Low_complexity Low_complexity 1 58 0 1740 129 4 0 chr2 8741761 8742001 -241945853 + AluSx SINE Alu 1 241 -71 252 0 0 0 chr2 8742004 8742032 -241945822 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 365 261 59 17 chr2 8742976 8743095 -241944759 - L2 LINE L2 0 3313 3190 3349 160 75 60 chr2 8743401 8743888 -241943966 + L1MB7 LINE L1 5378 5856 -328 2165 121 0 3 chr2 8743888 8744186 -241943668 + AluSx SINE Alu 1 297 -15 3349 160 75 60 chr2 8744186 8744410 -241943444 + L1MB7 LINE L1 5856 6075 -109 1905 118 29 4 chr2 8744410 8744689 -241943165 + AluSx SINE Alu 2 287 -25 207 0 0 0 chr2 8744690 8744713 -241943141 + (CA)n Simple_repeat Simple_repeat 2 24 0 3349 160 75 60 chr2 8744713 8744784 -241943070 + L1MB7 LINE L1 6074 6175 -9 315 311 107 0 chr2 8744841 8744944 -241942910 - L3 LINE CR1 -3 1574 1461 309 296 165 11 chr2 8745015 8745191 -241942663 + MIR SINE MIR 2 204 -58 517 290 36 44 chr2 8745314 8745562 -241942292 + L1MC4 LINE L1 7657 7902 -140 2110 138 0 0 chr2 8745675 8745973 -241941881 - AluSx SINE Alu -9 303 6 1060 104 0 0 chr2 8746006 8746140 -241941714 + AluSg SINE Alu 1 134 -176 2219 114 0 0 chr2 8746140 8746438 -241941416 + AluSx SINE Alu 1 298 -14 1501 183 13 50 chr2 8746536 8746837 -241941017 + AluJo SINE Alu 1 290 -22 658 183 0 0 chr2 8746962 8747066 -241940788 - U13 snRNA snRNA 0 104 1 1578 175 7 54 chr2 8747209 8747506 -241940348 - AluJo SINE Alu -29 283 1 2148 130 0 0 chr2 8747629 8747922 -241939932 + AluSg SINE Alu 1 293 -17 2218 110 3 0 chr2 8747987 8748286 -241939568 + AluSc SINE Alu 1 300 -9 236 238 183 55 chr2 8748340 8748504 -241939350 + MLT1J1 LTR MaLR 23 207 -239 291 200 158 11 chr2 8748539 8748634 -241939220 + MLT1J2 LTR MaLR 305 413 -37 2033 131 0 7 chr2 8748807 8749105 -241938749 + AluSc SINE Alu 1 296 -13 1091 138 0 0 chr2 8749105 8749280 -241938574 + AluSg/x SINE Alu 132 306 0 359 257 6 80 chr2 8749306 8749481 -241938373 + L1ME4a LINE L1 5851 6012 -109 26 0 0 0 chr2 8750650 8750676 -241937178 + AT_rich Low_complexity Low_complexity 1 26 0 193 270 0 0 chr2 8751913 8751950 -241935904 - L2 LINE L2 -18 3254 3218 * 417 290 18 38 chr2 8751938 8752094 -241935760 - MIR SINE MIR -62 146 12 2112 87 45 0 chr2 8752171 8752458 -241935396 + AluY SINE Alu 1 300 -11 883 73 0 33 chr2 8752596 8752747 -241935107 + (GGGGA)n Simple_repeat Simple_repeat 4 149 0 2394 72 0 26 chr2 8753830 8754134 -241933720 - AluY SINE Alu -15 296 1 324 312 163 16 chr2 8754451 8754651 -241933203 + MIR SINE MIR 4 230 -32 449 263 85 0 chr2 8754994 8755112 -241932742 + MIR SINE MIR 2 129 -133 1088 265 66 55 chr2 8755290 8755940 -241931914 + L1MC4a LINE L1 5175 5403 -743 2236 124 0 3 chr2 8756000 8756314 -241931540 + AluSq SINE Alu 1 313 0 1984 137 17 3 chr2 8756477 8756777 -241931077 + AluSx SINE Alu 1 304 -8 850 178 8 0 chr2 8756977 8757106 -241930748 + FLAM_C SINE Alu 1 130 -3 1936 140 16 13 chr2 8757408 8757716 -241930138 - AluSx SINE Alu -3 309 1 1927 151 84 6 chr2 8758408 8758765 -241929089 + L1MA4 LINE L1 5915 6299 -1 263 274 0 0 chr2 8758845 8758907 -241928947 + HAL1 LINE L1 578 639 -1868 1862 113 60 0 chr2 8758976 8759242 -241928612 + AluSx SINE Alu 1 282 -30 2178 94 3 7 chr2 8759263 8759560 -241928294 + AluSc SINE Alu 1 296 -13 956 231 16 0 chr2 8759815 8760001 -241927853 + MER5A DNA MER1_type 1 189 0 2208 113 3 3 chr2 8760005 8760307 -241927547 + AluSq SINE Alu 1 302 -11 373 327 47 57 chr2 8760327 8760530 -241927324 + L1ME4a LINE L1 5653 5854 -267 1939 149 0 13 chr2 8760530 8760838 -241927016 + AluJo SINE Alu 1 304 -8 373 327 47 57 chr2 8760838 8760931 -241926923 + L1ME4a LINE L1 5854 5946 -175 1898 129 11 4 chr2 8761431 8761710 -241926144 - AluSc SINE Alu -14 295 15 229 175 0 62 chr2 8761818 8761898 -241925956 + T-rich Low_complexity Low_complexity 3 77 0 248 263 150 0 chr2 8761976 8762056 -241925798 - L2 LINE L2 -6 3307 3216 1768 152 0 61 chr2 8762484 8762813 -241925041 + AluJo SINE Alu 1 309 -3 1647 130 8 16 chr2 8762813 8763066 -241924788 + AluSx SINE Alu 46 296 -16 230 309 32 11 chr2 8763068 8763162 -241924692 - L2 LINE L2 -620 2694 2599 2159 112 0 13 chr2 8763807 8764110 -241923744 + AluSg SINE Alu 1 299 -11 1735 147 51 17 chr2 8764242 8764535 -241923319 - AluJb SINE Alu -9 303 1 2247 117 3 0 chr2 8765153 8765461 -241922393 - AluSx SINE Alu -3 309 1 1994 113 10 52 chr2 8765493 8765802 -241922052 + AluSx SINE Alu 1 296 -16 209 258 371 0 chr2 8765809 8765906 -241921948 - L2 LINE L2 -960 2354 2222 2344 120 78 12 chr2 8766030 8766190 -241921664 - Tigger4(Zombi) DNA MER2_type 0 2731 2583 2441 60 0 0 chr2 8766190 8766474 -241921380 - AluY SINE Alu -27 284 1 2344 120 78 12 chr2 8766474 8766721 -241921133 - Tigger4(Zombi) DNA MER2_type -148 2583 2297 397 134 224 0 chr2 8766723 8766790 -241921064 - Tigger4(Zombi) DNA MER2_type -2647 84 3 226 97 97 97 chr2 8767551 8767623 -241920231 + Charlie2b DNA MER1_type 1365 1436 -1346 2424 89 0 3 chr2 8768107 8768421 -241919433 + AluSp SINE Alu 1 313 0 2265 92 0 3 chr2 8768497 8768790 -241919064 + AluSg SINE Alu 1 292 -18 427 274 101 48 chr2 8771307 8771515 -241916339 + MIR SINE MIR 6 224 -38 283 253 44 22 chr2 8771895 8771986 -241915868 + MIR SINE MIR 55 147 -61 1605 181 32 0 chr2 8772248 8772525 -241915329 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 8772561 8772857 -241914997 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 8773098 8773270 -241914584 - FAM SINE Alu 0 175 1 1668 171 46 0 chr2 8773281 8773562 -241914292 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 8773657 8773893 -241913961 - Tigger3(Golem) DNA MER2_type -8 3021 2761 2325 105 0 0 chr2 8774035 8774339 -241913515 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 8774794 8774818 -241913036 + AT_rich Low_complexity Low_complexity 1 24 0 2253 97 6 39 chr2 8775163 8775338 -241912516 - AluSx SINE Alu 0 302 140 2121 125 7 10 chr2 8775338 8775505 -241912349 - AluSx SINE Alu -9 303 136 2130 115 0 7 chr2 8775505 8775800 -241912054 - AluSg SINE Alu -17 293 1 2121 125 7 10 chr2 8775800 8775936 -241911918 - AluSx SINE Alu -176 136 1 2253 97 6 39 chr2 8775936 8776071 -241911783 - AluSx SINE Alu -162 140 2 2422 79 3 16 chr2 8776287 8776604 -241911250 + AluSq SINE Alu 1 313 0 1817 166 46 0 chr2 8776859 8777184 -241910670 + MER47A DNA MER2_type 27 366 0 189 0 0 0 chr2 8778852 8778873 -241908981 + (CATA)n Simple_repeat Simple_repeat 4 24 0 1706 167 13 29 chr2 8778922 8779233 -241908621 + AluJo SINE Alu 1 306 -6 290 259 80 45 chr2 8779380 8779492 -241908362 + L3 LINE CR1 1238 1353 -224 2306 100 3 0 chr2 8781785 8782086 -241905768 + AluSq SINE Alu 1 302 -11 1563 173 26 48 chr2 8782122 8782434 -241905420 + AluJo SINE Alu 1 305 -7 1981 120 7 0 chr2 8782607 8782883 -241904971 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 8782883 8782905 -241904949 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 8785091 8785426 -241902428 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 8785457 8785559 -241902295 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 8785740 8786046 -241901808 + AluSg SINE Alu 1 306 -4 380 252 56 0 chr2 8786101 8786208 -241901646 + MIR SINE MIR 149 261 -1 1943 85 114 7 chr2 8786533 8786805 -241901049 - AluSg SINE Alu -9 301 1 1522 148 13 62 chr2 8786849 8787154 -241900700 + AluJo SINE Alu 15 304 -8 40 37 0 0 chr2 8787166 8787220 -241900634 + AT_rich Low_complexity Low_complexity 1 54 0 180 0 0 0 chr2 8787220 8787240 -241900614 + (CA)n Simple_repeat Simple_repeat 2 21 0 255 61 0 0 chr2 8787273 8787306 -241900548 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 36 0 0 chr2 8787548 8787576 -241900278 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 8788610 8788646 -241899208 + AT_rich Low_complexity Low_complexity 1 36 0 2086 129 24 0 chr2 8788719 8789014 -241898840 + AluSq SINE Alu 1 302 -11 780 165 44 25 chr2 8789997 8790155 -241897699 - AluSg/x SINE Alu -13 296 136 412 238 0 0 chr2 8790154 8790238 -241897616 - FRAM/FAM SINE Alu -92 84 1 * 2101 87 50 3 chr2 8790660 8790959 -241896895 + AluSq SINE Alu 1 313 0 2146 83 6 92 chr2 8791085 8791412 -241896442 - AluSq SINE Alu -14 299 1 2171 117 7 0 chr2 8791429 8791737 -241896117 - AluSx SINE Alu -1 311 2 417 273 43 50 chr2 8792781 8792920 -241894934 + MIR SINE MIR 2 139 -123 279 265 53 53 chr2 8793333 8793465 -241894389 + MIR SINE MIR 16 147 -61 1605 181 32 0 chr2 8793727 8794004 -241893850 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 8794040 8794336 -241893518 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 8794577 8794749 -241893105 - FAM SINE Alu 0 175 1 1724 164 46 0 chr2 8794760 8795041 -241892813 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 8795136 8795372 -241892482 - Tigger3(Golem) DNA MER2_type -8 3021 2761 2325 105 0 0 chr2 8795514 8795818 -241892036 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 8796273 8796297 -241891557 + AT_rich Low_complexity Low_complexity 1 24 0 1990 98 59 0 chr2 8796640 8796927 -241890927 - AluSx SINE Alu -8 304 1 4249 146 38 122 chr2 8796971 8797378 -241890476 - MER21A LTR ERV1 -6 925 485 2179 108 27 0 chr2 8797378 8797673 -241890181 + AluSx SINE Alu 1 303 -9 4249 146 38 122 chr2 8797673 8798262 -241889592 - MER21A LTR ERV1 -446 485 13 1894 125 7 4 chr2 8798670 8798983 -241888871 - AluSq SINE Alu 0 314 1 2317 98 0 3 chr2 8799205 8799500 -241888354 - AluSq SINE Alu -14 299 6 1601 175 0 52 chr2 8799834 8799989 -241887865 - AluJo SINE Alu -24 288 153 2463 80 0 0 chr2 8799989 8800288 -241887566 - AluSg SINE Alu -11 299 1 1601 175 0 52 chr2 8800288 8800418 -241887436 - AluJo SINE Alu -159 153 18 286 218 154 13 chr2 8801164 8801242 -241886612 + L2 LINE L2 3184 3272 0 702 158 79 20 chr2 8801902 8802054 -241885800 + MER3 DNA MER1_type 1 161 -48 586 307 20 0 chr2 8802054 8802256 -241885598 + L1MB7 LINE L1 5970 6175 -9 339 232 11 21 chr2 8802326 8802421 -241885433 + L1MC5 LINE L1 7824 7917 -44 297 125 0 0 chr2 8802450 8802490 -241885364 + MER3 DNA MER1_type 160 199 -10 1845 166 27 0 chr2 8802665 8802960 -241884894 + AluJb SINE Alu 6 308 -4 27 0 0 0 chr2 8803136 8803163 -241884691 + AT_rich Low_complexity Low_complexity 1 27 0 2044 100 7 43 chr2 8803165 8803464 -241884390 - AluSx SINE Alu -24 288 1 1629 81 5 0 chr2 8804008 8804206 -241883648 + AluSc SINE Alu 1 199 -110 2306 100 3 0 chr2 8806450 8806751 -241881103 + AluSq SINE Alu 1 302 -11 1450 182 28 48 chr2 8806787 8807078 -241880776 + AluJo SINE Alu 1 285 -27 1981 120 7 0 chr2 8807270 8807546 -241880308 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 8807546 8807568 -241880286 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 8809754 8810089 -241877765 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 8810120 8810222 -241877632 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 8810403 8810709 -241877145 + AluSg SINE Alu 1 306 -4 391 243 56 0 chr2 8810764 8810871 -241876983 + MIR SINE MIR 149 261 -1 180 0 0 0 chr2 8811196 8811216 -241876638 + (T)n Simple_repeat Simple_repeat 1 20 0 1711 66 0 0 chr2 8811268 8811466 -241876388 - AluSc SINE Alu -109 200 3 997 124 0 0 chr2 8811591 8811720 -241876134 - FLAM_C SINE Alu 0 133 5 1888 152 0 20 chr2 8812272 8812568 -241875286 - AluSx SINE Alu -22 290 1 815 161 101 8 chr2 8812577 8812756 -241875098 - L1MD3 LINE L1 0 7995 7834 2193 112 7 0 chr2 8812756 8813052 -241874802 - AluSx SINE Alu -14 298 1 815 161 101 8 chr2 8813052 8813079 -241874775 - L1MD3 LINE L1 -161 7834 7562 1587 124 98 23 chr2 8813100 8813366 -241874488 + AluJo SINE Alu 1 286 -26 792 170 146 24 chr2 8813383 8813595 -241874259 - L1MB5 LINE L1 -2 6172 5935 461 148 44 23 chr2 8813567 8813656 -241874198 - L1MD3 LINE L1 -201 7794 7621 * 1827 121 4 0 chr2 8813689 8813938 -241873916 + AluSx SINE Alu 1 250 -62 1780 174 56 25 chr2 8814406 8814798 -241873056 + MLT1C LTR MaLR 12 415 -52 1799 137 6 37 chr2 8814817 8815139 -241872715 - AluJb SINE Alu 0 312 1 708 145 120 0 chr2 8816631 8816748 -241871106 + FLAM_C SINE Alu 1 131 -2 247 300 22 22 chr2 8816764 8816854 -241871000 + L1MB7 LINE L1 5558 5647 -474 2357 86 0 22 chr2 8816975 8817289 -241870565 - AluSq SINE Alu -6 307 1 247 264 57 89 chr2 8818520 8818800 -241869054 - L1M4 LINE L1 -644 5534 5264 374 279 107 62 chr2 8819034 8819278 -241868576 - L1M4 LINE L1 -3638 2508 2254 3772 172 41 20 chr2 8819294 8819999 -241867855 - L1MB8 LINE L1 0 6178 5459 2507 62 0 3 chr2 8820178 8820482 -241867372 + AluY SINE Alu 1 303 -8 231 114 0 0 chr2 8820750 8820785 -241867069 + (A)n Simple_repeat Simple_repeat 1 35 0 736 219 12 19 chr2 8820802 8820962 -241866892 + MER5A DNA MER1_type 28 186 -3 213 342 26 51 chr2 8821042 8821159 -241866695 - L2 LINE L2 -10 3262 3149 1698 171 3 13 chr2 8821548 8821852 -241866002 + AluJo SINE Alu 1 301 -11 234 311 185 44 chr2 8821854 8822337 -241865517 - L2 LINE L2 0 3313 2760 1947 123 7 20 chr2 8822951 8823251 -241864603 - AluSx SINE Alu -16 296 1 386 69 103 0 chr2 8827944 8828002 -241859852 - MADE1 DNA Mariner -15 65 2 1737 161 94 16 chr2 8828908 8829280 -241858574 + L1MB3 LINE L1 5773 6173 -10 1727 169 42 0 chr2 8829303 8829587 -241858267 + AluJo SINE Alu 1 296 -16 1750 178 44 0 chr2 8829587 8829908 -241857946 + L1MB7 LINE L1 5827 6161 -23 1297 188 26 48 chr2 8830151 8830460 -241857394 - AluJb SINE Alu -10 302 1 649 190 0 0 chr2 8831108 8831224 -241856630 + AluSg/x SINE Alu 194 309 0 35 0 0 0 chr2 8831234 8831269 -241856585 + AT_rich Low_complexity Low_complexity 1 35 0 625 203 79 57 chr2 8832592 8832769 -241855085 + Charlie1b DNA MER1_type 11 191 -332 225 88 88 0 chr2 8832825 8832859 -241854995 + Charlie1b DNA MER1_type 487 523 0 1653 197 100 39 chr2 8833245 8833357 -241854497 - L1ME2 LINE L1 0 6164 6060 4025 58 8 0 chr2 8833357 8833842 -241854012 + L1PA7 LINE L1 5666 6154 0 1653 197 100 39 chr2 8833842 8834241 -241853613 - L1ME2 LINE L1 -104 6060 5622 305 226 78 17 chr2 8834263 8834378 -241853476 - L1MC5 LINE L1 -52 7909 7788 257 261 225 42 chr2 8834900 8835042 -241852812 + L1ME LINE L1 5493 5660 -461 2185 99 7 0 chr2 8835138 8835446 -241852408 + AluSp SINE Alu 1 310 0 1815 144 46 0 chr2 8835633 8835917 -241851937 + AluJb SINE Alu 1 297 -15 664 212 51 78 chr2 8836138 8836355 -241851499 - MER20 DNA MER1_type 0 219 9 2103 110 14 7 chr2 8836398 8836690 -241851164 - AluSx SINE Alu -18 294 1 1394 107 0 5 chr2 8836735 8836922 -241850932 + AluSg/x SINE Alu 111 296 -16 669 279 109 5 chr2 8837202 8837403 -241850451 + MIR SINE MIR 37 258 -4 295 314 145 6 chr2 8837407 8837566 -241850288 - MIR SINE MIR -72 190 10 2160 95 17 7 chr2 8838083 8838377 -241849477 - AluSx SINE Alu -15 297 1 670 198 33 0 chr2 8839203 8839324 -241848530 + FLAM_C SINE Alu 9 133 -10 349 257 57 86 chr2 8839602 8839777 -241848077 + L2 LINE L2 3122 3291 -22 28 0 0 0 chr2 8842099 8842127 -241845727 + GC_rich Low_complexity Low_complexity 1 28 0 1226 22 0 0 chr2 8842281 8842419 -241845435 - L1PA5 LINE L1 -271 5883 5746 2237 94 19 7 chr2 8842490 8842799 -241845055 - AluSq SINE Alu 0 313 1 1755 108 44 4 chr2 8843474 8843724 -241844130 + AluSx SINE Alu 18 277 -35 252 0 0 0 chr2 8843728 8843756 -241844098 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 576 247 149 39 chr2 8844122 8844721 -241843133 + L1MEd LINE L1 991 1641 -4488 496 197 171 0 chr2 8845080 8845203 -241842651 + MIR SINE MIR 103 245 -17 2153 97 3 0 chr2 8845306 8845596 -241842258 - AluSp SINE Alu -22 291 1 21 0 0 0 chr2 8845601 8845622 -241842232 + AT_rich Low_complexity Low_complexity 1 21 0 1804 127 11 7 chr2 8846468 8846752 -241841102 - AluSx SINE Alu -23 289 5 198 355 79 62 chr2 8846838 8847193 -241840661 + L2 LINE L2 2460 2820 -494 718 57 67 9 chr2 8850054 8850159 -241837695 + HY1 scRNA scRNA 1 111 -1 184 264 287 0 chr2 8850599 8850686 -241837168 + MIR SINE MIR 20 131 -131 863 196 99 22 chr2 8850861 8851719 -241836135 + L1M3 LINE L1 4765 5763 -420 180 0 0 0 chr2 8851740 8851760 -241836094 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 863 152 96 63 chr2 8851892 8852162 -241835692 + L1MB3 LINE L1 5108 5386 -760 2116 154 112 49 chr2 8852180 8852418 -241835436 + L1MB3 LINE L1 5495 5717 -457 2177 73 0 7 chr2 8852418 8852726 -241835128 - AluY SINE Alu 0 306 1 2116 154 112 49 chr2 8852726 8853104 -241834750 + L1MB3 LINE L1 5717 6173 -1 1614 158 43 4 chr2 8853126 8853405 -241834449 + AluJo SINE Alu 6 295 -17 30 59 0 0 chr2 8853730 8853781 -241834073 + GC_rich Low_complexity Low_complexity 1 51 0 251 206 48 32 chr2 8854710 8854773 -241833081 + L2 LINE L2 3202 3265 -7 2032 99 0 18 chr2 8854838 8855120 -241832734 - AluSq SINE Alu -36 277 1 2270 86 3 0 chr2 8855331 8855634 -241832220 - AluSc SINE Alu -5 304 1 1381 168 97 8 chr2 8855635 8855903 -241831951 - AluJo SINE Alu -19 293 2 528 259 30 15 chr2 8855904 8855936 -241831918 - Charlie2 DNA MER1_type -34 2828 2798 2157 88 3 0 chr2 8855936 8856230 -241831624 + AluY SINE Alu 1 295 -16 528 259 30 15 chr2 8856230 8856394 -241831460 - Charlie2 DNA MER1_type -64 2798 2629 1065 188 156 71 chr2 8856395 8856859 -241830995 + MLT1F LTR MaLR 2 576 -17 2510 50 0 0 chr2 8857483 8857780 -241830074 - AluSc SINE Alu -10 299 3 952 124 0 0 chr2 8857905 8858034 -241829820 - FLAM_C SINE Alu 0 133 5 1792 156 0 20 chr2 8858580 8858882 -241828972 - AluSx SINE Alu -16 296 1 788 168 94 5 chr2 8858891 8859070 -241828784 - L1MD3 LINE L1 0 7995 7833 2089 110 3 0 chr2 8859070 8859361 -241828493 - AluSx SINE Alu -14 298 7 788 168 94 5 chr2 8859361 8859393 -241828461 - L1MD3 LINE L1 -162 7833 7562 1495 124 98 23 chr2 8859414 8859680 -241828174 + AluJo SINE Alu 1 286 -26 807 174 141 24 chr2 8859697 8859910 -241827944 - L1MB5 LINE L1 -2 6172 5935 470 133 44 23 chr2 8859882 8859971 -241827883 - L1MD3 LINE L1 -201 7794 7621 * 1784 120 0 0 chr2 8860004 8860254 -241827600 + AluSx SINE Alu 1 250 -62 1796 208 52 22 chr2 8860722 8861140 -241826714 + MLT1C LTR MaLR 12 563 -63 1708 143 6 22 chr2 8861140 8861455 -241826399 - AluJb SINE Alu -2 310 1 1796 208 52 22 chr2 8861455 8861521 -241826333 + MLT1C LTR MaLR 563 626 0 314 125 21 0 chr2 8861744 8861792 -241826062 - MLT1B LTR MaLR -63 327 279 1851 143 3 13 chr2 8861946 8862109 -241825745 - AluJb SINE Alu -15 297 137 2024 89 6 70 chr2 8862109 8862424 -241825430 - AluSx SINE Alu -17 295 1 1851 143 3 13 chr2 8862424 8862560 -241825294 - AluJb SINE Alu -175 137 1 1992 127 6 22 chr2 8863388 8863521 -241824333 + AluSx SINE Alu 1 135 -177 2096 102 17 0 chr2 8863521 8863816 -241824038 + AluSp SINE Alu 1 300 -13 1992 127 6 22 chr2 8863816 8863997 -241823857 + AluSx SINE Alu 135 310 -2 1748 128 25 75 chr2 8864001 8864322 -241823532 + AluJb SINE Alu 1 305 -7 984 213 126 12 chr2 8864628 8864882 -241822972 - AluSg1 SINE Alu -14 295 13 2298 81 0 7 chr2 8865182 8865490 -241822364 + AluY SINE Alu 1 306 -5 870 148 0 0 chr2 8865499 8865641 -241822213 + FLAM_C SINE Alu 1 142 -1 281 227 172 78 chr2 8865971 8866099 -241821755 - MIR3 SINE MIR -45 163 24 846 169 0 0 chr2 8866166 8866296 -241821558 - FLAM_C SINE Alu -3 130 1 1544 174 27 13 chr2 8866304 8866603 -241821251 - AluJo SINE Alu -9 303 1 1758 171 14 0 chr2 8866907 8867200 -241820654 + AluJb SINE Alu 1 297 -15 2184 94 0 3 chr2 8867204 8867503 -241820351 + AluSx SINE Alu 1 298 -14 191 36 36 0 chr2 8867509 8867537 -241820317 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 314 256 64 40 chr2 8867825 8867950 -241819904 - LTR67 LTR ERVL -2 555 428 1841 81 49 0 chr2 8868557 8868803 -241819051 - AluSg SINE Alu -14 296 39 648 125 0 0 chr2 8868803 8868891 -241818963 - AluSg/x SINE Alu -22 288 201 232 198 427 0 chr2 8868892 8868988 -241818866 + MIR SINE MIR 56 192 -70 232 233 0 0 chr2 8869066 8869109 -241818745 + L2 LINE L2 3264 3306 -7 1969 122 7 3 chr2 8869143 8869446 -241818408 - AluSx SINE Alu -8 304 1 2283 97 0 0 chr2 8869562 8869871 -241817983 + AluSg SINE Alu 1 309 -1 206 279 0 0 chr2 8869908 8869951 -241817903 - L2 LINE L2 -7 3306 3264 265 235 345 8 chr2 8870029 8870148 -241817706 - MIR SINE MIR -70 192 34 839 134 25 45 chr2 8871351 8871508 -241816346 - FAM SINE Alu -14 171 18 548 113 94 57 chr2 8871595 8871701 -241816153 + MER5A DNA MER1_type 1 110 -79 193 333 32 0 chr2 8872219 8872282 -241815572 + L2 LINE L2 3249 3313 0 2334 90 0 0 chr2 8872317 8872618 -241815236 - AluSx SINE Alu -9 303 3 801 151 0 0 chr2 8872853 8872972 -241814882 + FLAM_C SINE Alu 1 119 -24 1911 92 55 14 chr2 8873389 8873682 -241814172 - AluSq SINE Alu -6 307 3 2276 89 7 0 chr2 8873755 8874057 -241813797 - AluSg SINE Alu -6 304 1 2140 110 7 0 chr2 8874074 8874382 -241813472 - AluSx SINE Alu -1 311 2 309 245 57 99 chr2 8875149 8875341 -241812513 - L1MEd LINE L1 -5933 186 3 2193 100 0 3 chr2 8875466 8875775 -241812079 + AluY SINE Alu 1 308 -3 1988 117 7 32 chr2 8875972 8876281 -241811573 + AluSg SINE Alu 2 302 -8 2190 88 10 0 chr2 8876298 8876595 -241811259 + AluSg SINE Alu 1 300 -10 1358 113 0 0 chr2 8876741 8876936 -241810918 + AluSg/x SINE Alu 92 286 -24 310 255 43 11 chr2 8876947 8877041 -241810813 + L1MC4a LINE L1 5376 5472 -2336 198 0 0 0 chr2 8877041 8877063 -241810791 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 841 130 23 0 chr2 8877063 8877194 -241810660 - AluSq/x SINE Alu -178 134 1 314 249 37 21 chr2 8877207 8877322 -241810532 + L1MC4a LINE L1 5475 5591 -530 430 285 75 31 chr2 8877345 8877573 -241810281 + L1MC4a LINE L1 5705 5942 -1866 1822 145 3 6 chr2 8877616 8877927 -241809927 + AluSx SINE Alu 1 310 -2 1727 161 17 7 chr2 8878046 8878344 -241809510 + AluJb SINE Alu 5 305 -7 232 149 106 0 chr2 8878521 8878568 -241809286 - L2 LINE L2 -5 3308 3257 755 278 0 0 chr2 8878699 8878872 -241808982 + MER8 DNA MER2_type 5 177 -62 328 200 46 0 chr2 8878901 8878966 -241808888 + MER8 DNA MER2_type 172 239 0 26 0 0 0 chr2 8879277 8879303 -241808551 + AT_rich Low_complexity Low_complexity 1 26 0 659 208 129 102 chr2 8879354 8879540 -241808314 + MER20B DNA MER1_type 83 262 -521 1807 148 3 10 chr2 8879540 8879837 -241808017 - AluSx SINE Alu -17 295 1 659 208 129 102 chr2 8879837 8879903 -241807951 + MER20B DNA MER1_type 262 347 -436 1979 128 0 16 chr2 8879903 8880207 -241807647 + AluSx SINE Alu 1 299 -13 659 208 129 102 chr2 8880207 8880247 -241807607 + MER20B DNA MER1_type 347 384 -399 328 243 7 81 chr2 8880564 8880700 -241807154 + FLAM_C SINE Alu 8 133 0 288 0 0 0 chr2 8880720 8880752 -241807102 + (T)n Simple_repeat Simple_repeat 1 32 0 1214 164 74 4 chr2 8880758 8880989 -241806865 + AluJo SINE Alu 6 252 -60 1449 190 45 3 chr2 8881147 8881437 -241806417 - AluJo SINE Alu -10 302 1 1950 123 7 13 chr2 8881634 8881934 -241805920 + AluSx SINE Alu 1 298 -14 2045 107 10 23 chr2 8882093 8882402 -241805452 - AluSq SINE Alu -8 305 1 14032 129 35 26 chr2 8882495 8882847 -241805007 - Tigger1 DNA MER2_type -18 2400 2053 2258 100 7 0 chr2 8882847 8883157 -241804697 - AluSp SINE Alu -1 312 1 14032 129 35 26 chr2 8883157 8885183 -241802671 - Tigger1 DNA MER2_type -365 2053 1 928 89 16 0 chr2 8885450 8885573 -241802281 + AluSp SINE Alu 1 125 -188 28 0 0 0 chr2 8886278 8886306 -241801548 + GC_rich Low_complexity Low_complexity 1 28 0 27 92 0 0 chr2 8886530 8886606 -241801248 + GC_rich Low_complexity Low_complexity 1 76 0 186 186 23 23 chr2 8888690 8888733 -241799121 + MIR SINE MIR 85 127 -135 911 247 20 51 chr2 8888958 8889213 -241798641 - MIR SINE MIR -3 259 13 375 305 93 55 chr2 8889464 8889601 -241798253 + MIR SINE MIR 15 160 -102 1732 160 3 7 chr2 8889601 8889889 -241797965 + AluJb SINE Alu 1 287 -25 375 305 93 55 chr2 8889889 8889990 -241797864 + MIR SINE MIR 160 256 -6 1135 226 47 68 chr2 8890506 8890629 -241797225 + MLT2C2 LTR ERVL 2 126 -338 2215 109 0 0 chr2 8890629 8890932 -241796922 - AluSx SINE Alu -9 303 1 1135 226 47 68 chr2 8890932 8891237 -241796617 + MLT2C2 LTR ERVL 126 421 -43 2097 121 0 3 chr2 8891326 8891624 -241796230 - AluSx SINE Alu -15 297 1 210 37 0 0 chr2 8891720 8891747 -241796107 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 214 340 123 9 chr2 8891789 8891895 -241795959 - MIR SINE MIR -108 154 37 313 262 78 10 chr2 8892589 8892692 -241795162 - L2 LINE L2 -4 3309 3200 814 209 47 29 chr2 8893807 8893979 -241793875 + MIR SINE MIR 8 182 -80 267 340 77 57 chr2 8894027 8894377 -241793477 + L2 LINE L2 2916 3272 0 726 241 63 130 chr2 8895519 8896088 -241791766 - LTR67 LTR ERVL -8 549 19 236 242 253 33 chr2 8896432 8896523 -241791331 - L2 LINE L2 0 3272 3162 186 322 111 30 chr2 8896557 8896756 -241791098 - L2 LINE L2 -264 3049 2835 2368 81 3 3 chr2 8896780 8897078 -241790776 + AluSg SINE Alu 1 298 -12 894 135 0 8 chr2 8897160 8897293 -241790561 - FLAM_C SINE Alu -1 132 1 1300 139 17 13 chr2 8897387 8897617 -241790237 - L1MB3 LINE L1 -2 6181 5951 2376 116 0 0 chr2 8897854 8898165 -241789689 - AluSx SINE Alu -1 311 1 501 264 184 20 chr2 8898524 8898725 -241789129 + MIR SINE MIR 23 256 -6 2454 87 0 0 chr2 8898807 8899117 -241788737 - AluY SINE Alu -1 310 1 1170 46 0 0 chr2 8899120 8899251 -241788603 - AluY SINE Alu -179 132 2 243 292 15 15 chr2 8900273 8900338 -241787516 + L2 LINE L2 3237 3301 -12 2613 56 0 0 chr2 8901697 8901999 -241785855 + AluY SINE Alu 1 302 -9 260 240 56 64 chr2 8902306 8902431 -241785423 + L2 LINE L2 3137 3260 -12 385 306 68 88 chr2 8902841 8903250 -241784604 - L2 LINE L2 -46 3226 2826 449 290 16 24 chr2 8903448 8903572 -241784282 - MIR SINE MIR -63 145 23 320 333 26 0 chr2 8904395 8904509 -241783345 + MIR SINE MIR 4 120 -142 21 0 0 0 chr2 8904509 8904530 -241783324 + AT_rich Low_complexity Low_complexity 1 21 0 502 186 41 10 chr2 8904551 8904648 -241783206 + MER33 DNA MER1_type 10 109 -215 470 290 101 63 chr2 8904882 8905120 -241782734 + MIR SINE MIR 16 262 0 251 259 0 0 chr2 8905360 8905414 -241782440 - LTR33 LTR ERVL -358 163 110 1303 133 282 0 chr2 8905414 8905655 -241782199 + AluSg1 SINE Alu 1 309 0 2374 119 0 0 chr2 8905672 8905984 -241781870 + AluSx SINE Alu 1 312 0 326 243 19 19 chr2 8905984 8906084 -241781770 - LTR33 LTR ERVL -398 123 21 564 332 21 0 chr2 8906103 8906290 -241781564 + MIR3 SINE MIR 5 195 -13 1594 177 141 52 chr2 8906298 8906783 -241781071 + L1MB7 LINE L1 5359 5889 -295 7117 58 9 1 chr2 8906794 8907688 -241780166 + L1PA5 LINE L1 5254 6154 0 436 289 31 0 chr2 8907780 8907939 -241779915 + LTR33 LTR ERVL 304 467 -54 1188 141 3 0 chr2 8907985 8908370 -241779484 + (TCCA)n Simple_repeat Simple_repeat 1 386 0 213 205 0 0 chr2 8908383 8908422 -241779432 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 220 267 95 103 chr2 8908459 8908575 -241779279 - L2 LINE L2 -8 3264 3150 222 118 0 0 chr2 8908620 8908654 -241779200 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 321 282 70 5 chr2 8909661 8909826 -241778028 + MIR SINE MIR 16 191 -63 191 286 143 0 chr2 8909895 8909951 -241777903 + MIR SINE MIR 87 150 -58 186 43 0 0 chr2 8910390 8910413 -241777441 + (CAGCC)n Simple_repeat Simple_repeat 1 23 0 270 250 45 0 chr2 8910477 8910565 -241777289 + CT-rich Low_complexity Low_complexity 4 95 0 635 253 125 108 chr2 8910645 8910847 -241777007 + L3 LINE CR1 1083 1280 -297 1906 134 10 7 chr2 8910847 8911137 -241776717 + AluSx SINE Alu 1 291 -21 635 253 125 108 chr2 8911137 8911405 -241776449 + L3 LINE CR1 1280 1561 -16 2284 117 3 3 chr2 8911861 8912169 -241775685 + AluSg SINE Alu 1 308 -2 1728 145 89 3 chr2 8912496 8912778 -241775076 + AluSx SINE Alu 1 306 -6 640 197 50 67 chr2 8913992 8914231 -241773623 - L1MC5 LINE L1 -64 7897 7663 1784 148 42 0 chr2 8914282 8914545 -241773309 - AluJo SINE Alu -38 274 1 414 283 47 57 chr2 8914545 8914837 -241773017 - L1MC5 LINE L1 -305 7656 7366 440 256 34 68 chr2 8915007 8915051 -241772803 + LTR16C LTR ERVL 167 211 -280 1974 149 3 3 chr2 8915051 8915371 -241772483 + AluJb SINE Alu 1 312 0 2294 110 0 0 chr2 8915379 8915665 -241772189 + AluSx SINE Alu 1 287 -20 192 40 0 0 chr2 8915665 8915690 -241772164 + (CA)n Simple_repeat Simple_repeat 2 26 0 440 256 34 68 chr2 8915695 8915817 -241772037 + LTR16C LTR ERVL 218 336 -155 23 0 0 0 chr2 8915832 8915855 -241771999 + AT_rich Low_complexity Low_complexity 1 23 0 361 261 104 8 chr2 8915917 8916051 -241771803 + LTR16C LTR ERVL 345 491 0 183 188 0 0 chr2 8916643 8916691 -241771163 + (TG)n Simple_repeat Simple_repeat 2 49 0 253 324 36 36 chr2 8916879 8916990 -241770864 + MIR SINE MIR 41 151 -111 3535 116 118 19 chr2 8917173 8917273 -241770581 + L1MC1 LINE L1 5587 5676 -657 2221 108 3 16 chr2 8917273 8917578 -241770276 + AluSx SINE Alu 1 301 -11 3535 116 118 19 chr2 8917578 8918149 -241769705 + L1MC1 LINE L1 5676 6324 -9 1880 155 14 0 chr2 8918204 8918488 -241769366 - AluJo SINE Alu -12 300 13 871 181 115 29 chr2 8918899 8919142 -241768712 - LTR45B LTR ERV1 0 489 226 2101 111 10 7 chr2 8919154 8919452 -241768402 + AluSq SINE Alu 1 299 -14 249 200 0 0 chr2 8919516 8919571 -241768283 - LTR45B LTR ERV1 -306 183 129 356 96 0 0 chr2 8919611 8919663 -241768191 - LTR45B LTR ERV1 -361 128 77 232 259 86 0 chr2 8919782 8919840 -241768014 + MIR SINE MIR 88 150 -112 325 285 65 32 chr2 8919911 8920034 -241767820 + MIR3 SINE MIR 71 197 -11 240 362 11 11 chr2 8920040 8920134 -241767720 + MER5A DNA MER1_type 7 100 -89 186 302 39 116 chr2 8920263 8920392 -241767462 + L2 LINE L2 2606 2724 -590 836 281 117 12 chr2 8920724 8921300 -241766554 - L1ME LINE L1 -357 5813 5175 186 43 0 0 chr2 8922216 8922239 -241765615 + (TG)n Simple_repeat Simple_repeat 2 24 0 2281 92 7 3 chr2 8922481 8922775 -241765079 + AluSx SINE Alu 1 295 -17 411 214 296 0 chr2 8923028 8923234 -241764620 + L2 LINE L2 2509 2775 -539 189 273 23 0 chr2 8923427 8923471 -241764383 + L2 LINE L2 3265 3309 -4 2261 98 0 0 chr2 8923555 8923840 -241764014 - AluSx SINE Alu -27 285 1 376 260 107 30 chr2 8924289 8924458 -241763396 - MIR SINE MIR 0 262 81 649 318 77 14 chr2 8924477 8924895 -241762959 + LTR16B LTR ERVL 21 464 0 325 259 129 14 chr2 8924917 8925064 -241762790 + MLT1J LTR MaLR 10 173 -338 359 132 0 29 chr2 8925191 8925259 -241762595 - L1M4 LINE L1 -914 5232 5167 2149 152 0 0 chr2 8925259 8925556 -241762298 + AluSx SINE Alu 1 297 -15 1355 153 80 90 chr2 8925605 8925906 -241761948 + AluJo SINE Alu 1 298 -14 265 232 0 61 chr2 8926078 8926160 -241761694 - MIR SINE MIR -116 92 16 1346 43 0 0 chr2 8926445 8926629 -241761225 + L1PA4 LINE L1 5983 6166 0 546 176 235 0 chr2 8927074 8927227 -241760627 - MER53 DNA DNA 0 189 1 198 323 125 67 chr2 8928231 8928544 -241759310 + L2 LINE L2 2921 3251 -21 937 189 13 13 chr2 8928801 8928960 -241758894 - FRAM SINE Alu -15 161 3 1922 134 38 3 chr2 8928974 8929264 -241758590 - AluSx SINE Alu -12 300 1 571 295 112 69 chr2 8929313 8929446 -241758408 - L1ME4a LINE L1 -296 5825 5699 2348 100 0 13 chr2 8929446 8929756 -241758098 - AluSx SINE Alu -6 306 1 571 295 112 69 chr2 8929756 8930168 -241757686 - L1ME4a LINE L1 -422 5699 5234 384 77 0 0 chr2 8930168 8930220 -241757634 + (TA)n Simple_repeat Simple_repeat 1 52 0 571 295 112 69 chr2 8930220 8930337 -241757517 - L1ME4a LINE L1 -887 5234 5124 24 0 0 0 chr2 8930441 8930465 -241757389 + AT_rich Low_complexity Low_complexity 1 24 0 316 274 234 51 chr2 8930777 8931131 -241756723 + L2 LINE L2 2853 3271 -1 344 282 86 58 chr2 8931587 8931761 -241756093 + MIR SINE MIR 34 212 -50 784 164 0 0 chr2 8932018 8932140 -241755714 + FLAM_C SINE Alu 1 122 -21 237 33 0 0 chr2 8932140 8932170 -241755684 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 590 11 34 11 chr2 8932197 8932285 -241755569 + (CA)n Simple_repeat Simple_repeat 1 90 0 386 287 108 46 chr2 8932450 8932595 -241755259 + L1ME4a LINE L1 5211 5346 -816 2258 112 0 7 chr2 8932595 8932891 -241754963 + AluSx SINE Alu 1 294 -18 386 287 108 46 chr2 8932891 8933003 -241754851 + L1ME4a LINE L1 5346 5485 -677 2017 123 10 30 chr2 8933020 8933320 -241754534 + AluJo SINE Alu 1 294 -18 258 248 111 46 chr2 8933323 8933476 -241754378 + L1ME4a LINE L1 5579 5741 -380 236 233 67 42 chr2 8933576 8933696 -241754158 + L1ME4a LINE L1 5974 6096 -25 2317 86 14 0 chr2 8934300 8934591 -241753263 - AluSx SINE Alu -17 295 1 2294 112 3 10 chr2 8935120 8935434 -241752420 + AluSx SINE Alu 1 312 0 2320 69 7 33 chr2 8935502 8935808 -241752046 + AluY SINE Alu 1 298 -13 1886 114 0 8 chr2 8936958 8937260 -241750594 + AluSx SINE Alu 30 312 0 2244 112 0 3 chr2 8938188 8938492 -241749362 - AluSx SINE Alu -9 303 1 2400 107 0 3 chr2 8939683 8939993 -241747861 - AluSg SINE Alu -1 309 1 193 292 79 11 chr2 8940495 8940584 -241747270 - L2 LINE L2 -556 2758 2664 415 277 150 58 chr2 8942619 8942829 -241745025 - L1ME4a LINE L1 -66 6055 5815 2445 87 0 0 chr2 8942829 8943127 -241744727 + AluSx SINE Alu 1 298 -14 415 277 150 58 chr2 8943127 8943176 -241744678 - L1ME4a LINE L1 -306 5815 5772 1837 159 0 21 chr2 8943441 8943724 -241744130 + AluJb SINE Alu 6 282 -30 512 30 15 0 chr2 8944152 8944218 -241743636 + (TTCA)n Simple_repeat Simple_repeat 4 70 0 347 267 0 0 chr2 8944512 8944587 -241743267 - MIR3 SINE MIR -51 157 83 255 180 66 0 chr2 8944614 8944675 -241743179 + GA-rich Low_complexity Low_complexity 2 66 0 252 320 107 27 chr2 8944921 8945071 -241742783 - L2 LINE L2 -29 3243 3082 3260 149 15 11 chr2 8945353 8945882 -241741972 + LTR26B LTR ERV1 1 531 0 480 313 0 0 chr2 8945970 8946101 -241741753 + MIR SINE MIR 111 241 -21 223 320 13 0 chr2 8946214 8946292 -241741562 - MIR SINE MIR -86 122 44 510 202 23 54 chr2 8946554 8946683 -241741171 + MER5A DNA MER1_type 12 136 -53 232 311 58 0 chr2 8946944 8947047 -241740807 - L2 LINE L2 -229 3043 2935 1023 240 43 0 chr2 8947085 8947318 -241740536 - MER115 DNA AcHobo 0 693 451 244 261 261 43 chr2 8947359 8947497 -241740357 - MER115 DNA AcHobo -308 385 218 508 195 29 98 chr2 8947692 8947866 -241739988 - L1M4 LINE L1 -1559 4587 4426 194 290 188 51 chr2 8947871 8948009 -241739845 - MIR SINE MIR -56 206 50 425 309 54 6 chr2 8948217 8948385 -241739469 + MER5B DNA MER1_type 1 176 -2 1806 139 0 22 chr2 8948505 8948779 -241739075 - AluJo SINE Alu -44 268 1 305 238 49 112 chr2 8948780 8948923 -241738931 + MIR SINE MIR 21 154 -108 762 230 227 16 chr2 8948929 8949299 -241738555 + MLT1H1 LTR MaLR 46 493 -62 185 311 44 82 chr2 8949592 8949727 -241738127 - L2 LINE L2 -21 3251 3122 1087 130 43 24 chr2 8949731 8949938 -241737916 + L1PA15 LINE L1 5942 6152 -13 365 252 63 0 chr2 8950781 8950908 -241736946 + MIR SINE MIR 25 159 -103 1870 127 92 11 chr2 8950908 8951255 -241736599 - THE1C LTR MaLR 0 375 1 2053 152 28 6 chr2 8951359 8951714 -241736140 + MLT1A1 LTR MaLR 3 365 0 1660 159 65 23 chr2 8952230 8952538 -241735316 - MLT1A1 LTR MaLR 0 365 45 1236 157 77 21 chr2 8952538 8952896 -241734958 + LTR47A LTR ERVL 1 452 0 318 85 0 21 chr2 8952899 8952946 -241734908 - MLT1A1 LTR MaLR -328 46 1 349 346 48 5 chr2 8952997 8953185 -241734669 - MIR SINE MIR -17 245 50 1861 158 13 17 chr2 8953351 8953649 -241734205 + AluJb SINE Alu 1 297 -15 2295 79 9 32 chr2 8954067 8954382 -241733472 + AluSx SINE Alu 1 308 -4 180 125 0 0 chr2 8954426 8954458 -241733396 + (CA)n Simple_repeat Simple_repeat 1 32 0 2069 153 3 3 chr2 8954615 8954923 -241732931 - AluJb SINE Alu -4 308 1 3657 208 68 19 chr2 8954952 8955645 -241732209 + Charlie1a DNA MER1_type 5 755 -2006 2335 105 0 3 chr2 8955645 8955950 -241731904 - AluSq SINE Alu -9 304 1 3657 208 68 19 chr2 8955950 8956175 -241731679 + Charlie1a DNA MER1_type 755 968 -487 2008 111 61 0 chr2 8956176 8956455 -241731399 - AluSq SINE Alu -17 296 1 891 169 144 88 chr2 8956461 8956650 -241731204 + Charlie1a DNA MER1_type 1077 1254 -1507 1733 165 0 4 chr2 8956650 8956917 -241730937 - AluJb SINE Alu -45 267 2 891 169 144 88 chr2 8956917 8957081 -241730773 + Charlie1a DNA MER1_type 1254 1450 -5 247 298 177 44 chr2 8957454 8957568 -241730286 + MER5A DNA MER1_type 11 153 -36 2087 114 7 36 chr2 8957568 8957875 -241729979 + AluSx SINE Alu 1 298 -14 247 298 177 44 chr2 8957875 8957918 -241729936 + MER5A DNA MER1_type 153 189 0 1980 147 39 74 chr2 8958243 8958781 -241729073 - MER51A LTR ERV1 0 640 1 776 334 98 14 chr2 8959029 8959787 -241728067 + L1MEc LINE L1 1000 1820 -4576 325 339 58 36 chr2 8959905 8960129 -241727725 + L1MEc LINE L1 1940 2168 -4047 845 222 6 11 chr2 8960135 8960311 -241727543 + FAM SINE Alu 1 175 0 289 234 170 34 chr2 8960329 8960363 -241727491 - L1MC5 LINE L1 -36 7925 7897 1456 202 6 42 chr2 8960363 8960675 -241727179 + AluJo SINE Alu 1 301 -11 289 234 170 34 chr2 8960675 8960875 -241726979 - L1MC5 LINE L1 -64 7897 7659 422 299 77 58 chr2 8960875 8960934 -241726920 + L1MEc LINE L1 2181 2237 -3978 2140 140 10 0 chr2 8960934 8961242 -241726612 - AluSx SINE Alu -1 311 1 422 299 77 58 chr2 8961242 8961389 -241726465 + L1MEc LINE L1 2237 2391 -3824 1349 142 124 11 chr2 8961502 8961769 -241726085 - AluJo SINE Alu 0 312 16 1811 68 5 5 chr2 8962052 8962271 -241725583 + AluSp SINE Alu 1 219 -94 827 98 0 49 chr2 8962271 8962393 -241725461 + AluSp/q SINE Alu 188 303 -10 210 37 0 0 chr2 8963079 8963106 -241724748 + (CA)n Simple_repeat Simple_repeat 2 28 0 294 114 0 0 chr2 8963351 8963395 -241724459 + U5 snRNA snRNA 8 51 -65 278 169 264 0 chr2 8963559 8963673 -241724181 + MIR SINE MIR 104 261 -1 2390 97 13 0 chr2 8964088 8964396 -241723458 - AluSx SINE Alu 0 312 1 191 260 26 39 chr2 8965388 8965465 -241722389 + MIR3 SINE MIR 128 203 -5 180 231 0 0 chr2 8965858 8965897 -241721957 + MIR SINE MIR 91 129 -79 2288 110 0 10 chr2 8966566 8966875 -241720979 - AluSx SINE Alu -6 306 1 1414 147 107 20 chr2 8967478 8967730 -241720124 - AluJb SINE Alu -6 306 33 2043 93 41 10 chr2 8967786 8968077 -241719777 - AluSq SINE Alu -13 300 1 2283 157 95 17 chr2 8968197 8968618 -241719236 - LTR32 LTR ERVL -6 465 12 1887 290 53 25 chr2 8968630 8969303 -241718551 - HAL1 LINE L1 -310 2197 1497 2046 143 20 3 chr2 8969303 8969604 -241718250 + AluSx SINE Alu 1 306 -6 1887 290 53 25 chr2 8969604 8969727 -241718127 - HAL1 LINE L1 -1010 1497 1379 1090 285 124 14 chr2 8969760 8970266 -241717588 - HAL1 LINE L1 -1832 675 114 240 224 0 0 chr2 8970266 8970333 -241717521 + (TG)n Simple_repeat Simple_repeat 1 67 0 252 265 88 0 chr2 8970333 8970401 -241717453 - HAL1 LINE L1 -2421 86 13 345 243 21 104 chr2 8970981 8971045 -241716809 - MIR3 SINE MIR 0 208 140 280 81 0 0 chr2 8971045 8971082 -241716772 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 2124 90 25 11 chr2 8971084 8971361 -241716493 - AluSq SINE Alu -32 281 1 345 243 21 104 chr2 8971361 8971437 -241716417 - MIR3 SINE MIR -69 139 77 554 261 79 14 chr2 8972229 8972444 -241715410 - L1M4 LINE L1 -1131 5015 4787 322 312 105 75 chr2 8972654 8972949 -241714905 + L2 LINE L2 2883 3186 -86 547 264 156 26 chr2 8973024 8973255 -241714599 - MIR SINE MIR 0 262 2 188 311 29 39 chr2 8973998 8974101 -241713753 + MIR SINE MIR 27 128 -134 2478 78 3 0 chr2 8974462 8974769 -241713085 + AluY SINE Alu 1 308 -3 2624 102 3 0 chr2 8975449 8975812 -241712042 + THE1B LTR MaLR 1 364 0 331 236 121 98 chr2 8975832 8976006 -241711848 - MER20B DNA MER1_type -604 179 2 1906 97 89 4 chr2 8976024 8976315 -241711539 + AluSc SINE Alu 1 313 0 273 182 125 23 chr2 8976346 8976434 -241711420 - L2 LINE L2 -14 3299 3203 2340 170 22 10 chr2 8977149 8977211 -241710643 - MSTB LTR MaLR -4 422 362 1847 115 11 11 chr2 8977211 8977472 -241710382 + AluSg SINE Alu 38 298 -12 2340 170 22 10 chr2 8977472 8977821 -241710033 - MSTB LTR MaLR -64 362 6 2336 92 3 13 chr2 8977821 8978126 -241709728 + AluSq SINE Alu 1 302 -11 854 29 20 0 chr2 8978820 8978922 -241708932 + AluY SINE Alu 208 311 0 2207 118 0 3 chr2 8980605 8980902 -241706952 - AluSx SINE Alu -3 309 14 251 169 0 51 chr2 8981346 8981405 -241706449 + L1MB2 LINE L1 6095 6150 -21 311 309 71 0 chr2 8981407 8981491 -241706363 + L1MC4 LINE L1 6614 6703 -1339 1880 123 42 11 chr2 8981618 8981902 -241705952 + AluSx SINE Alu 1 293 -19 2212 125 3 0 chr2 8982649 8982946 -241704908 + AluSx SINE Alu 3 300 -12 2236 86 0 4 chr2 8983691 8983970 -241703884 - AluSq SINE Alu -11 302 25 251 275 84 61 chr2 8984438 8984531 -241703323 - MIR SINE MIR -96 166 68 2388 155 19 19 chr2 8984531 8984963 -241702891 - MSTB1 LTR MaLR 0 432 1 251 275 84 61 chr2 8984963 8985000 -241702854 - MIR SINE MIR -194 68 33 779 201 0 0 chr2 8985534 8985678 -241702176 + U4 snRNA snRNA 1 144 -1 1149 123 0 0 chr2 8985929 8985953 -241701901 + (TGGG)n Simple_repeat Simple_repeat 1 203 0 1149 123 0 0 chr2 8985953 8986132 -241701722 + (TGGG)n Simple_repeat Simple_repeat 2 180 0 496 31 0 0 chr2 8986764 8986829 -241701025 + AluY SINE Alu 2 66 -244 180 77 0 0 chr2 8986848 8986874 -241700980 + (A)n Simple_repeat Simple_repeat 1 26 0 388 280 49 42 chr2 8987256 8987399 -241700455 + MIR SINE MIR 38 181 -81 1401 282 54 9 chr2 8987466 8987927 -241699927 + MLT1L LTR MaLR 58 539 -76 665 216 70 75 chr2 8987941 8988196 -241699658 + MIR SINE MIR 16 262 0 224 272 0 65 chr2 8988483 8988652 -241699202 + G-rich Low_complexity Low_complexity 2 159 0 2012 129 26 7 chr2 8989513 8989815 -241698039 - AluSx SINE Alu -4 308 1 2691 49 0 0 chr2 8990282 8990587 -241697267 - AluY SINE Alu -6 305 1 560 271 98 5 chr2 8990678 8990892 -241696962 + L1MEd LINE L1 594 827 -5292 1863 164 6 31 chr2 8990908 8991226 -241696628 - AluJb SINE Alu -2 310 1 26 30 0 0 chr2 8991237 8991270 -241696584 + AT_rich Low_complexity Low_complexity 1 33 0 544 270 103 68 chr2 8991285 8992137 -241695717 + L1MEd LINE L1 852 1673 -4637 1974 143 28 0 chr2 8992137 8992424 -241695430 + AluJb SINE Alu 1 295 -17 544 270 103 68 chr2 8992424 8992601 -241695253 + L1MEd LINE L1 1673 1842 -4468 2087 144 0 0 chr2 8992601 8992899 -241694955 - AluSx SINE Alu -14 298 1 544 270 103 68 chr2 8992899 8993295 -241694559 + L1MEd LINE L1 1842 2345 -3965 24 0 0 0 chr2 8993379 8993403 -241694451 + AT_rich Low_complexity Low_complexity 1 24 0 333 316 67 84 chr2 8993756 8994113 -241693741 - L2 LINE L2 -20 3252 2902 684 187 169 21 chr2 8994821 8995188 -241692666 + LTR48 LTR ERV1 362 706 -1 1347 175 34 7 chr2 8995189 8995458 -241692396 - L1MB4 LINE L1 -317 5863 5588 475 157 122 68 chr2 8995627 8995774 -241692080 + MLT1B LTR MaLR 1 155 -235 360 194 15 0 chr2 8995777 8995844 -241692010 + MLT1B LTR MaLR 303 370 -4 241 333 62 14 chr2 8996815 8996959 -241690895 - MIR3 SINE MIR -23 185 35 478 335 12 0 chr2 8997021 8997194 -241690660 + (TCTCTG)n Simple_repeat Simple_repeat 5 179 0 251 366 0 0 chr2 8997582 8997694 -241690160 + (CA)n Simple_repeat Simple_repeat 1 112 0 211 316 0 0 chr2 8997761 8997840 -241690014 + (CA)n Simple_repeat Simple_repeat 1 79 0 236 347 62 0 chr2 8998561 8998705 -241689149 - MLT1H1 LTR MaLR -335 220 68 1036 183 27 76 chr2 8998747 8999010 -241688844 + MLT1D LTR MaLR 256 505 0 887 231 113 48 chr2 8999913 9000224 -241687630 - MER58B DNA MER1_type -1 340 10 254 231 62 0 chr2 9000248 9000313 -241687541 - MER81 DNA DNA 0 114 46 282 308 19 19 chr2 9000967 9001071 -241686783 + MIR3 SINE MIR 53 156 -52 2350 58 19 22 chr2 9001103 9001416 -241686438 - AluSx SINE Alu 0 312 1 10862 128 32 35 chr2 9001936 9002765 -241685089 + Tigger1 DNA MER2_type 23 854 -1564 1902 118 186 14 chr2 9002765 9003130 -241684724 - MSTA LTR MaLR 0 428 1 10862 128 32 35 chr2 9003130 9004010 -241683844 + Tigger1 DNA MER2_type 854 1727 -691 1683 187 29 0 chr2 9004010 9004320 -241683534 + L1PA16 LINE L1 5848 6166 0 10862 128 32 35 chr2 9004320 9004501 -241683353 + Tigger1 DNA MER2_type 1727 1907 -511 1270 124 6 0 chr2 9004504 9004682 -241683172 - AluSx SINE Alu -133 179 1 923 147 35 56 chr2 9004685 9004883 -241682971 + Tigger1 DNA MER2_type 2225 2418 0 255 213 0 0 chr2 9005394 9005441 -241682413 + U2 snRNA snRNA 1 47 -141 1723 164 0 14 chr2 9005538 9005824 -241682030 + AluJo SINE Alu 1 282 -30 2254 95 0 0 chr2 9005875 9006169 -241681685 - AluSx SINE Alu -18 294 1 2066 88 7 11 chr2 9006718 9007044 -241680810 - AluSp SINE Alu 0 325 1 199 196 22 0 chr2 9007266 9007312 -241680542 + MIR SINE MIR 47 93 -169 474 78 0 117 chr2 9007332 9007373 -241680481 - MER53 DNA DNA -5 184 140 2028 123 3 0 chr2 9007373 9007675 -241680179 + AluSx SINE Alu 1 303 -9 474 78 0 117 chr2 9007675 9007736 -241680118 - MER53 DNA DNA -49 140 94 2137 122 0 3 chr2 9007864 9008175 -241679679 + AluSq SINE Alu 1 310 -3 853 218 132 0 chr2 9008262 9008459 -241679395 - MER58A DNA MER1_type -1 223 1 398 329 43 69 chr2 9009133 9009316 -241678538 - L2 LINE L2 -29 3284 3109 2635 166 25 52 chr2 9009316 9009839 -241678015 + LTR54 LTR ERV1 2 510 0 398 329 43 69 chr2 9009839 9009932 -241677922 - L2 LINE L2 -204 3109 3015 243 304 108 0 chr2 9010001 9010103 -241677751 - LTR33A LTR ERVL 0 523 411 2246 119 0 0 chr2 9010107 9010419 -241677435 + AluSq SINE Alu 1 312 -1 397 295 12 21 chr2 9010668 9010840 -241677014 + L1ME LINE L1 5263 5428 -749 1042 125 82 86 chr2 9010849 9010890 -241676964 - MLT2B3 LTR ERVL 0 554 514 1959 166 17 39 chr2 9010890 9011246 -241676608 + MER7A DNA MER2_type 1 346 0 1042 125 82 86 chr2 9011246 9011436 -241676418 - MLT2B3 LTR ERVL -40 514 324 198 313 0 73 chr2 9011614 9011710 -241676144 + MIR SINE MIR 172 260 -2 273 318 11 0 chr2 9011778 9011866 -241675988 + L2 LINE L2 3183 3271 -1 229 264 41 58 chr2 9012113 9012234 -241675620 + L2 LINE L2 1580 1698 -1616 457 270 8 0 chr2 9012248 9012374 -241675480 + L2 LINE L2 2246 2372 -942 184 208 69 14 chr2 9012439 9012511 -241675343 + L2 LINE L2 2837 2912 -402 386 336 8 0 chr2 9012597 9012722 -241675132 + L1ME LINE L1 5596 5721 -449 854 267 44 4 chr2 9012893 9013144 -241674710 + MIR SINE MIR 2 262 0 330 244 61 0 chr2 9013231 9013313 -241674541 + MIR SINE MIR 96 182 -80 472 225 17 33 chr2 9013460 9013580 -241674274 - MIR3 SINE MIR -8 200 83 609 115 10 39 chr2 9013803 9013907 -241673947 + L1MA10 LINE L1 6234 6334 0 1201 40 20 0 chr2 9013915 9014103 -241673751 + L1PA2 LINE L1 6002 6155 0 197 329 264 0 chr2 9014166 9014306 -241673548 - MIR SINE MIR -10 252 76 1888 116 36 7 chr2 9014390 9014693 -241673161 + AluJb SINE Alu 1 312 0 285 307 73 13 chr2 9014972 9015122 -241672732 - MIR3 SINE MIR -7 201 43 653 238 54 18 chr2 9015182 9015350 -241672504 + MER5B DNA MER1_type 5 178 0 2380 83 0 0 chr2 9015459 9015761 -241672093 - AluSx SINE Alu -10 302 1 330 329 37 30 chr2 9016050 9016214 -241671640 - MIR SINE MIR -78 184 20 276 270 167 24 chr2 9016998 9017124 -241670730 + MIR3 SINE MIR 18 161 -47 262 358 58 0 chr2 9017122 9017242 -241670612 + MIR3 SINE MIR 69 195 -13 * 1206 58 0 0 chr2 9018575 9018730 -241669124 + (TTCCC)n Simple_repeat Simple_repeat 3 157 0 2148 92 7 29 chr2 9020014 9020320 -241667534 + AluSx SINE Alu 1 299 -13 1143 138 0 11 chr2 9021620 9021801 -241666053 - AluSp SINE Alu -1 312 134 2112 100 38 0 chr2 9021802 9022092 -241665762 - AluSq SINE Alu -10 303 3 1203 170 55 103 chr2 9022106 9022126 -241665728 + MLT1B LTR MaLR 1 20 -370 2190 178 3 11 chr2 9022126 9022492 -241665362 + MLT1A1 LTR MaLR 1 363 -2 1203 170 55 103 chr2 9022492 9022800 -241665054 + MLT1B LTR MaLR 20 313 -77 1021 172 91 5 chr2 9022826 9023047 -241664807 + MLT2C2 LTR ERVL 215 454 -10 212 0 0 35 chr2 9023731 9023760 -241664094 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 183 279 162 0 chr2 9023803 9023871 -241663983 + L2 LINE L2 2716 2794 -520 185 193 0 18 chr2 9027624 9027681 -241660173 + (CA)n Simple_repeat Simple_repeat 2 57 0 2090 84 39 0 chr2 9028340 9028624 -241659230 + AluSc SINE Alu 1 295 -14 1957 123 3 0 chr2 9028770 9029081 -241658773 - AluSx SINE Alu 0 312 1 961 267 90 15 chr2 9029402 9029814 -241658040 + MLT1C LTR MaLR 7 449 -18 2239 116 0 0 chr2 9030603 9030971 -241656883 + AluSq SINE Alu 1 368 0 231 114 0 0 chr2 9034155 9034190 -241653664 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 411 21 0 0 chr2 9034327 9034375 -241653479 + (TG)n Simple_repeat Simple_repeat 1 48 0 186 71 0 0 chr2 9034377 9034405 -241653449 + (GA)n Simple_repeat Simple_repeat 2 29 0 1672 98 0 45 chr2 9034418 9034663 -241653191 - AluSq SINE Alu -79 234 1 1622 188 24 3 chr2 9034856 9035148 -241652706 - AluJb SINE Alu -14 298 1 2075 95 0 7 chr2 9035231 9035515 -241652339 + AluSq SINE Alu 1 282 -31 1333 225 186 19 chr2 9035515 9035987 -241651867 + L1ME3A LINE L1 5592 6142 -28 410 256 47 16 chr2 9036080 9036209 -241651645 + MLT1J2 LTR MaLR 253 385 -65 198 103 0 0 chr2 9036244 9036273 -241651581 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 847 235 57 4 chr2 9036406 9036653 -241651201 + L1MC4a LINE L1 5804 6063 -1745 584 167 28 0 chr2 9036877 9036985 -241650869 - L1MB5 LINE L1 -249 5925 5815 2048 134 0 0 chr2 9037200 9037491 -241650363 - AluSp SINE Alu -22 291 1 1559 248 62 12 chr2 9037612 9038044 -241649810 + MLT1C LTR MaLR 6 459 -8 701 304 45 20 chr2 9038119 9038366 -241649488 + MIR SINE MIR 9 261 -1 367 322 122 6 chr2 9039517 9039697 -241648157 + MIR SINE MIR 35 235 -27 675 179 0 7 chr2 9039701 9039877 -241647977 - AluJo SINE Alu -91 221 14 1175 240 118 48 chr2 9040246 9040704 -241647150 - MLT1F1 LTR MaLR -8 559 70 826 199 33 50 chr2 9041214 9041294 -241646560 - MER45A DNA AcHobo -1403 178 98 1803 157 7 13 chr2 9041294 9041593 -241646261 + AluJb SINE Alu 1 297 -15 826 199 33 50 chr2 9041593 9041693 -241646161 - MER45A DNA AcHobo -1483 98 1 234 0 0 0 chr2 9042065 9042091 -241645763 + (TATG)n Simple_repeat Simple_repeat 3 28 0 747 203 38 0 chr2 9042093 9042226 -241645628 - FRAM SINE Alu -30 146 9 249 111 205 94 chr2 9042228 9042261 -241645593 + Charlie4 DNA MER1_type 1825 1853 -108 1507 205 93 37 chr2 9042261 9042636 -241645218 + MSTD LTR MaLR 1 396 0 249 111 205 94 chr2 9042636 9042719 -241645135 + Charlie4 DNA MER1_type 1853 1954 -7 296 309 91 30 chr2 9043102 9043267 -241644587 - MIR SINE MIR -33 229 55 211 369 99 19 chr2 9043538 9043953 -241643901 - L2 LINE L2 -411 2903 2456 916 231 39 21 chr2 9044431 9044665 -241643189 + MIR SINE MIR 12 249 -13 222 200 0 0 chr2 9044634 9044684 -241643170 + L2 LINE L2 3264 3313 0 * 249 283 0 0 chr2 9044892 9044952 -241642902 + L2 LINE L2 2999 3058 -214 237 339 73 0 chr2 9045814 9045938 -241641916 + L2 LINE L2 2393 2525 -789 884 236 15 0 chr2 9045940 9046135 -241641719 + MER20 DNA MER1_type 1 198 -21 328 290 186 41 chr2 9046153 9046320 -241641534 + L2 LINE L2 2519 2660 -653 2265 102 0 10 chr2 9046320 9046633 -241641221 - AluSg SINE Alu 0 310 1 328 290 186 41 chr2 9046633 9046918 -241640936 + L2 LINE L2 2660 3043 -270 243 0 0 0 chr2 9047640 9047667 -241640187 + (CA)n Simple_repeat Simple_repeat 2 28 0 460 236 73 37 chr2 9048577 9048784 -241639070 + L1PA8A LINE L1 5384 5597 -569 340 232 189 0 chr2 9048811 9049047 -241638807 + L1ME2 LINE L1 5894 6331 -3 386 312 115 35 chr2 9049346 9049686 -241638168 + L2 LINE L2 2892 3258 -14 2522 147 22 15 chr2 9049716 9049760 -241638094 + MLT1C LTR MaLR 1 43 -424 2225 169 8 13 chr2 9049760 9050150 -241637704 + MLT1B LTR MaLR 3 390 0 2522 147 22 15 chr2 9050150 9050567 -241637287 + MLT1C LTR MaLR 43 465 -2 202 358 32 0 chr2 9051317 9051412 -241636442 - L3 LINE CR1 -46 1531 1434 2453 150 55 5 chr2 9052735 9053174 -241634680 - MER65C LTR ERV1 0 461 1 393 292 134 61 chr2 9054247 9054641 -241633213 - L2 LINE L2 -18 3254 2832 525 135 31 0 chr2 9054681 9054777 -241633077 - L1MC2 LINE L1 -3 6341 6243 283 167 19 0 chr2 9054777 9054831 -241633023 - L1MC1 LINE L1 -131 6202 6148 244 270 40 50 chr2 9054967 9055067 -241632787 + L2 LINE L2 3155 3253 -19 347 285 0 35 chr2 9055068 9055212 -241632642 + GA-rich Low_complexity Low_complexity 3 141 0 262 340 59 20 chr2 9055218 9055371 -241632483 - L2 LINE L2 -592 2722 2564 702 287 48 5 chr2 9057249 9057437 -241630417 + MER91A DNA MER1_type 1 196 0 560 317 32 32 chr2 9058018 9058239 -241629615 + L3 LINE CR1 538 758 -819 193 305 220 44 chr2 9059251 9059592 -241628262 + L3 LINE CR1 1091 1491 -86 302 359 0 0 chr2 9060153 9060270 -241627584 + (CA)n Simple_repeat Simple_repeat 1 117 0 180 282 105 32 chr2 9060270 9060394 -241627460 - L2 LINE L2 -176 3096 2964 200 284 109 38 chr2 9060573 9060784 -241627070 + L2 LINE L2 2560 2785 -529 271 140 263 0 chr2 9060850 9060907 -241626947 + Tigger2 DNA MER2_type 1 72 -2646 2126 146 39 62 chr2 9060929 9061282 -241626572 + Tigger2 DNA MER2_type 2296 2639 -79 1898 157 0 7 chr2 9061282 9061575 -241626279 - AluJo SINE Alu -16 296 6 2126 146 39 62 chr2 9061575 9061654 -241626200 + Tigger2 DNA MER2_type 2639 2718 0 443 260 35 65 chr2 9061668 9061837 -241626017 - MIR SINE MIR -79 183 20 245 230 115 44 chr2 9061849 9061962 -241625892 - MER5A DNA MER1_type -2 187 67 284 309 43 64 chr2 9064212 9064400 -241623454 + MIR SINE MIR 8 191 -71 181 214 176 61 chr2 9064410 9064541 -241623313 - L2 LINE L2 -4 3268 3123 460 303 37 21 chr2 9064714 9064902 -241622952 - MIR SINE MIR -70 192 2 254 252 41 57 chr2 9065334 9065457 -241622397 + MIR3 SINE MIR 10 130 -78 243 0 0 0 chr2 9066158 9066185 -241621669 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 232 313 125 39 chr2 9066185 9066393 -241621461 - L2 LINE L2 -17 3255 3030 300 195 52 13 chr2 9066465 9066542 -241621312 - MIR SINE MIR -60 148 69 214 286 187 0 chr2 9067923 9068014 -241619840 - MIR SINE MIR -66 196 89 1898 174 52 17 chr2 9068062 9068469 -241619385 - MLT1C LTR MaLR -44 423 3 307 283 71 20 chr2 9068832 9068931 -241618923 + MIR SINE MIR 42 145 -117 1865 128 0 7 chr2 9069131 9069405 -241618449 + AluSx SINE Alu 39 310 -2 183 337 61 10 chr2 9069767 9069865 -241617989 + MIR SINE MIR 34 136 -72 298 219 176 34 chr2 9070592 9070711 -241617143 + MIR3 SINE MIR 4 139 -69 1059 96 6 11 chr2 9071027 9071205 -241616649 + (TGGA)n Simple_repeat Simple_repeat 4 180 0 2051 117 36 0 chr2 9071386 9071667 -241616187 + AluSg SINE Alu 1 291 -19 265 268 0 0 chr2 9071676 9071758 -241616096 - L1 LINE L1 -2763 3383 3302 717 203 62 0 chr2 9071806 9071934 -241615920 - FRAM SINE Alu -41 135 1 325 241 36 0 chr2 9071935 9072018 -241615836 - L1 LINE L1 -2884 3262 3177 2030 105 0 0 chr2 9072037 9072294 -241615560 + AluSx SINE Alu 1 257 -55 597 205 0 8 chr2 9072294 9072405 -241615449 - AluSq/x SINE Alu -194 118 9 300 242 121 0 chr2 9072432 9072523 -241615331 - L1 LINE L1 -2978 3168 3067 737 301 60 25 chr2 9072533 9072815 -241615039 + L2 LINE L2 3021 3312 -1 689 123 61 0 chr2 9072893 9073007 -241614847 - FLAM_C SINE Alu -20 123 3 214 277 161 9 chr2 9073029 9073141 -241614713 - MIR3 SINE MIR -69 139 11 1846 150 3 26 chr2 9074186 9074493 -241613361 - AluJo SINE Alu -12 300 1 340 242 33 44 chr2 9074744 9074835 -241613019 + L2 LINE L2 3183 3272 0 2243 108 3 3 chr2 9075736 9076033 -241611821 + AluSx SINE Alu 1 297 -15 202 267 208 10 chr2 9076166 9076267 -241611587 - MIR3 SINE MIR -85 123 3 452 178 0 11 chr2 9076549 9076639 -241611215 + L1MEc LINE L1 35 123 -6273 566 289 73 34 chr2 9076646 9077027 -241610827 - Charlie1a DNA MER1_type -964 491 96 281 214 155 0 chr2 9077792 9077876 -241609978 - L1ME4a LINE L1 -3 6118 6022 301 296 78 0 chr2 9077973 9078088 -241609766 - L1ME4a LINE L1 -280 5841 5718 2343 100 3 0 chr2 9078420 9078719 -241609135 + AluSp SINE Alu 1 300 -13 219 238 88 25 chr2 9079159 9079239 -241608615 - L2 LINE L2 -2 3311 3227 21 0 0 0 chr2 9080042 9080063 -241607791 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 9080063 9080092 -241607762 + (TG)n Simple_repeat Simple_repeat 2 30 0 190 271 21 0 chr2 9080340 9080388 -241607466 + MIR SINE MIR 101 149 -113 200 347 14 0 chr2 9080851 9080923 -241606931 + MIR SINE MIR 161 233 -29 916 207 35 0 chr2 9082117 9082291 -241605563 - MER5A DNA MER1_type 0 189 10 1957 159 0 0 chr2 9082532 9082827 -241605027 - AluSx SINE Alu -17 295 1 303 301 147 44 chr2 9083307 9083443 -241604411 + MIR SINE MIR 25 174 -88 1879 165 26 3 chr2 9083493 9083796 -241604058 - AluJb SINE Alu -2 310 1 285 333 93 13 chr2 9083830 9083980 -241603874 + MIR3 SINE MIR 30 191 -17 381 115 0 0 chr2 9084079 9084131 -241603723 + MER5A DNA MER1_type 138 189 0 29 28 0 0 chr2 9084755 9084791 -241603063 + AT_rich Low_complexity Low_complexity 1 36 0 184 268 0 0 chr2 9084828 9084869 -241602985 + L2 LINE L2 3007 3047 -225 2391 99 0 6 chr2 9085016 9085330 -241602524 - AluSq SINE Alu -1 312 1 1898 127 19 61 chr2 9085356 9085444 -241602410 - MER47A DNA MER2_type -1957 366 276 1870 149 7 21 chr2 9085444 9085732 -241602122 + AluJo SINE Alu 13 296 -16 1898 127 19 61 chr2 9085732 9086005 -241601849 - MER47A DNA MER2_type -2047 276 20 281 267 110 27 chr2 9087072 9087218 -241600636 - L2 LINE L2 -188 3125 2968 254 211 239 55 chr2 9087215 9087324 -241600530 + MER5A DNA MER1_type 61 189 0 * 1748 189 116 193 chr2 9087324 9087596 -241600258 - L2 LINE L2 -702 2612 2320 1734 150 44 78 chr2 9087596 9087982 -241599872 - THE1C LTR MaLR -2 373 1 10039 115 19 46 chr2 9087982 9089422 -241598432 - THE1C-int LTR MaLR 0 1580 189 1951 161 7 3 chr2 9089422 9089721 -241598133 - AluSx SINE Alu -12 300 1 10039 115 19 46 chr2 9089721 9089903 -241597951 - THE1C-int LTR MaLR -1391 189 3 1978 126 60 30 chr2 9089905 9090269 -241597585 - THE1C LTR MaLR 0 375 1 1748 189 116 193 chr2 9090269 9090377 -241597477 - L2 LINE L2 -994 2320 2205 664 193 0 7 chr2 9090377 9090517 -241597337 - MER104 DNA Tc2 -7 173 35 1748 189 116 193 chr2 9090517 9090994 -241596860 - L2 LINE L2 -1109 2205 1688 42371 42 4 1 chr2 9090998 9097126 -241590728 + L1PA4 LINE L1 2 6149 -6 796 237 67 22 chr2 9097126 9097396 -241590458 - L2 LINE L2 -1612 1702 1421 193 299 16 118 chr2 9098488 9098615 -241589239 - MIR3 SINE MIR -16 192 79 237 47 0 70 chr2 9099232 9099275 -241588579 + (TTTTG)n Simple_repeat Simple_repeat 2 180 0 2201 111 4 0 chr2 9099275 9099555 -241588299 - AluSg SINE Alu -29 281 1 595 144 0 0 chr2 9099754 9099844 -241588010 + AluSg/x SINE Alu 206 295 -17 35 88 0 0 chr2 9099994 9100085 -241587769 + AT_rich Low_complexity Low_complexity 1 91 0 1613 170 14 14 chr2 9100172 9100460 -241587394 + AluJb SINE Alu 9 296 -16 1201 231 128 79 chr2 9100490 9101034 -241586820 - HAL1 LINE L1 -110 2397 1814 2298 94 0 10 chr2 9101034 9101341 -241586513 - AluY SINE Alu -7 304 1 1201 231 128 79 chr2 9101341 9101455 -241586399 - HAL1 LINE L1 -693 1814 1707 2405 251 84 46 chr2 9101499 9102005 -241585849 - HAL1 LINE L1 -1604 903 349 2201 113 3 0 chr2 9102005 9102305 -241585549 + AluY SINE Alu 1 301 -10 2405 251 84 46 chr2 9102305 9102668 -241585186 - HAL1 LINE L1 -2158 349 1 408 184 8 5 chr2 9102764 9102896 -241584958 - MER5A DNA MER1_type 0 189 1 381 296 81 6 chr2 9102924 9103096 -241584758 - L1ME LINE L1 -317 5804 5620 499 228 101 7 chr2 9103114 9103263 -241584591 - L2 LINE L2 -32 3281 3119 1994 274 72 32 chr2 9103327 9104040 -241583814 + L2 LINE L2 2120 2860 -454 486 86 0 14 chr2 9104054 9104124 -241583730 - THE1B LTR MaLR -53 311 243 846 231 156 60 chr2 9104160 9104403 -241583451 + L2 LINE L2 2871 3089 -224 751 173 16 0 chr2 9104403 9104530 -241583324 - FLAM_A SINE Alu -4 129 1 846 231 156 60 chr2 9104530 9104689 -241583165 + L2 LINE L2 3089 3312 -1 2116 112 20 20 chr2 9104918 9105223 -241582631 - AluSx SINE Alu -7 305 1 2532 113 6 6 chr2 9105367 9105731 -241582123 - THE1B LTR MaLR 0 364 1 194 286 162 32 chr2 9106133 9106287 -241581567 + MIR SINE MIR 89 262 0 1006 232 46 13 chr2 9106636 9106873 -241580981 + MIR SINE MIR 18 262 0 1066 299 84 32 chr2 9107089 9107615 -241580239 + L2 LINE L2 2174 2726 -588 218 189 0 19 chr2 9107780 9107833 -241580021 + CT-rich Low_complexity Low_complexity 1 52 0 771 224 13 13 chr2 9108018 9108174 -241579680 + MER5A DNA MER1_type 6 161 -28 644 166 14 90 chr2 9108202 9108347 -241579507 - AluJo SINE Alu -178 134 1 205 205 0 0 chr2 9108347 9108386 -241579468 + MER5A DNA MER1_type 151 189 0 847 300 84 33 chr2 9108606 9108759 -241579095 - L2 LINE L2 -2 3311 3167 366 83 250 0 chr2 9108759 9108819 -241579035 - MADE1 DNA Mariner -3 77 3 847 300 84 33 chr2 9108819 9108996 -241578858 - L2 LINE L2 -146 3167 3000 2572 200 33 13 chr2 9108996 9109535 -241578319 - MER44D DNA MER2_type 0 605 1 847 300 84 33 chr2 9109535 9109719 -241578135 - L2 LINE L2 -313 3000 2776 584 182 53 28 chr2 9109720 9109870 -241577984 - L1ME2 LINE L1 0 6165 6020 694 221 121 26 chr2 9109888 9110122 -241577732 - L2 LINE L2 -550 2764 2505 185 306 94 24 chr2 9110122 9110207 -241577647 - MER5C DNA MER1_type 0 324 234 225 0 0 0 chr2 9110386 9110411 -241577443 + (T)n Simple_repeat Simple_repeat 1 25 0 2051 125 7 14 chr2 9111011 9111307 -241576547 + AluSx SINE Alu 1 294 -18 701 258 44 18 chr2 9111478 9111703 -241576151 + L2 LINE L2 3083 3313 0 2108 79 23 0 chr2 9112069 9112335 -241575519 - AluSg SINE Alu -16 294 23 353 286 0 0 chr2 9112336 9112413 -241575441 - FLAM_A SINE Alu -50 83 7 21 0 0 0 chr2 9112908 9112929 -241574925 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 9113062 9113083 -241574771 + AT_rich Low_complexity Low_complexity 1 21 0 4774 172 29 14 chr2 9113841 9114728 -241573126 - MER52A LTR ERV1 0 1755 881 358 198 0 99 chr2 9114726 9114847 -241573007 + MER52A LTR ERV1 125 233 -1522 * 262 316 51 35 chr2 9115115 9115316 -241572538 + MIR SINE MIR 32 230 -32 407 291 29 0 chr2 9115897 9116000 -241571854 - MIR3 SINE MIR -6 202 97 180 197 56 70 chr2 9115998 9116069 -241571785 + MIR SINE MIR 141 210 -52 * 289 119 0 0 chr2 9116255 9116297 -241571557 - tRNA-Cys-TGC tRNA tRNA -31 44 3 2355 83 0 0 chr2 9116744 9117034 -241570820 + AluSc SINE Alu 1 290 -19 1585 217 70 9 chr2 9117276 9117793 -241570061 - L1MEc LINE L1 -3563 2652 2141 1071 179 21 56 chr2 9117795 9118029 -241569825 - AluJo SINE Alu 0 312 87 4802 258 92 24 chr2 9118029 9118750 -241569104 - L1MEc LINE L1 -4248 2148 1478 2292 103 6 3 chr2 9118750 9119062 -241568792 - AluSq SINE Alu 0 313 1 4802 258 92 24 chr2 9119062 9120320 -241567534 - L1MEc LINE L1 -4918 1478 34 3608 144 104 17 chr2 9120577 9120733 -241567121 - L1MA7 LINE L1 -2 6289 6148 2255 94 0 3 chr2 9120733 9121031 -241566823 - AluSp SINE Alu -16 297 1 3608 144 104 17 chr2 9121031 9121058 -241566796 - L1MA7 LINE L1 -143 6148 6125 4235 168 56 92 chr2 9121058 9122334 -241565520 + Tigger3b DNA MER2_type 1 1230 -1 3608 144 104 17 chr2 9122334 9122900 -241564954 - L1MA7 LINE L1 -166 6125 5474 499 203 4 144 chr2 9123058 9123294 -241564560 - L1MC4 LINE L1 -3 8039 7837 492 247 43 19 chr2 9123331 9123493 -241564361 + L1ME3A LINE L1 5721 5886 -276 1021 128 7 7 chr2 9123502 9123651 -241564203 + AluJb SINE Alu 137 285 -27 302 338 85 52 chr2 9123653 9123925 -241563929 + L1ME3A LINE L1 5860 6140 -30 2079 126 0 3 chr2 9125182 9125476 -241562378 + AluJb SINE Alu 6 298 -14 207 0 0 0 chr2 9125773 9125796 -241562058 + (T)n Simple_repeat Simple_repeat 1 23 0 198 0 0 0 chr2 9126580 9126602 -241561252 + (A)n Simple_repeat Simple_repeat 1 22 0 488 272 83 18 chr2 9128138 9128307 -241559547 - MER5A DNA MER1_type -1 188 9 2146 154 25 18 chr2 9128950 9129347 -241558507 - L1MB3 LINE L1 0 6183 5784 961 185 100 0 chr2 9129420 9129620 -241558234 - L1MB3 LINE L1 -392 5791 5572 314 255 121 25 chr2 9129626 9129783 -241558071 - L1ME4a LINE L1 -1 6120 5949 261 315 27 27 chr2 9129787 9129933 -241557921 - L1ME4a LINE L1 -196 5925 5780 362 276 105 13 chr2 9129934 9130086 -241557768 + L1ME4a LINE L1 5738 5903 -218 363 314 189 30 chr2 9130146 9130211 -241557643 - L2 LINE L2 -561 2753 2700 1931 167 0 6 chr2 9130211 9130522 -241557332 + AluJb SINE Alu 1 309 -3 363 314 189 30 chr2 9130522 9130863 -241556991 - L2 LINE L2 -614 2700 2282 339 250 76 8 chr2 9130900 9131032 -241556822 + L1ME4a LINE L1 5974 6114 -7 292 225 0 50 chr2 9131047 9131144 -241556710 + L1ME4a LINE L1 5692 5771 -350 21 36 0 0 chr2 9131214 9131242 -241556612 + AT_rich Low_complexity Low_complexity 1 28 0 1927 235 56 43 chr2 9132197 9132802 -241555052 - L1ME3A LINE L1 0 6170 5558 2193 64 7 4 chr2 9133039 9133343 -241554511 - AluY SINE Alu 0 305 1 4348 116 49 1 chr2 9134070 9134745 -241553109 - L1PA15 LINE L1 0 6165 5459 24 0 0 0 chr2 9135810 9135834 -241552020 + AT_rich Low_complexity Low_complexity 1 24 0 283 284 71 0 chr2 9136683 9136810 -241551044 + L1ME4a LINE L1 5968 6103 -18 1714 177 0 37 chr2 9136846 9137145 -241550709 - AluJo SINE Alu -24 288 1 212 260 39 39 chr2 9137785 9137862 -241549992 - MIR SINE MIR -166 96 20 2444 80 0 6 chr2 9137991 9138304 -241549550 - AluY SINE Alu 0 311 1 293 191 0 0 chr2 9138549 9138596 -241549258 + L2 LINE L2 3218 3264 -8 238 240 0 0 chr2 9138884 9138934 -241548920 + L2 LINE L2 3263 3312 -1 189 229 47 151 chr2 9139318 9139576 -241548278 - L2 LINE L2 -230 3042 2812 1010 224 18 23 chr2 9139653 9139872 -241547982 - MIR SINE MIR -40 222 5 396 203 98 41 chr2 9140080 9140203 -241547651 - MIR SINE MIR -63 145 28 224 266 8 113 chr2 9141822 9141946 -241545908 + L2 LINE L2 2926 3036 -236 269 282 14 0 chr2 9142095 9142166 -241545688 + MIR SINE MIR 183 254 -8 284 301 32 41 chr2 9142179 9142302 -241545552 + L2 LINE L2 3151 3272 0 213 373 0 0 chr2 9142460 9142519 -241545335 + L3 LINE CR1 1504 1562 -15 196 293 69 0 chr2 9142664 9142722 -241545132 - MIR SINE MIR -59 149 88 535 175 0 0 chr2 9143363 9143460 -241544394 - L1MD3 LINE L1 -158 7837 7741 328 263 25 24 chr2 9143741 9143855 -241543999 + MIR SINE MIR 9 130 -78 282 109 91 0 chr2 9145123 9145178 -241542676 - L1MC/D LINE L1 -780 5462 5403 2856 212 111 11 chr2 9145192 9146181 -241541673 + L1ME1 LINE L1 5072 6158 -8 2226 98 6 28 chr2 9146786 9147103 -241540751 - AluSp SINE Alu -3 310 1 223 296 56 0 chr2 9147418 9147472 -241540382 - L2 LINE L2 -13 3300 3244 219 330 97 10 chr2 9147600 9147703 -241540151 - L2 LINE L2 -2 3270 3159 191 236 135 67 chr2 9147705 9147748 -241540106 - MIR3 SINE MIR -105 103 64 2758 10 0 0 chr2 9147748 9148047 -241539807 + AluYa5 SINE Alu 1 299 -12 191 236 135 67 chr2 9148047 9148092 -241539762 - MIR3 SINE MIR -144 64 9 467 228 0 78 chr2 9149377 9149557 -241538297 - L1MD3 LINE L1 -70 7925 7548 1577 242 82 50 chr2 9150081 9150717 -241537137 - L1MC4 LINE L1 -162 7880 7225 1869 149 4 4 chr2 9151074 9151349 -241536505 - AluJo SINE Alu -37 275 1 201 250 175 25 chr2 9151843 9151923 -241535931 + MIR3 SINE MIR 76 167 -41 315 345 61 20 chr2 9152045 9152193 -241535661 + MIR SINE MIR 12 165 -97 * 1463 224 49 75 chr2 9152188 9152776 -241535078 + L2 LINE L2 2726 3313 0 236 198 229 62 chr2 9152780 9152876 -241534978 + MIR SINE MIR 151 262 0 2085 120 24 0 chr2 9152922 9153214 -241534640 + AluSx SINE Alu 3 301 -11 2474 68 3 3 chr2 9153354 9153650 -241534204 + AluSp SINE Alu 1 296 -17 35 24 0 0 chr2 9155052 9155094 -241532760 + AT_rich Low_complexity Low_complexity 1 42 0 2409 72 7 0 chr2 9155117 9155409 -241532445 + AluY SINE Alu 1 294 -17 301 207 207 12 chr2 9155411 9155493 -241532361 - MIR SINE MIR -100 162 65 204 191 0 32 chr2 9155494 9155557 -241532297 + T-rich Low_complexity Low_complexity 1 61 0 236 380 0 25 chr2 9155995 9156158 -241531696 + (CCCG)n Simple_repeat Simple_repeat 2 160 0 383 333 0 27 chr2 9156192 9156375 -241531479 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 * 495 314 0 30 chr2 9156351 9157147 -241530707 + (CCCG)n Simple_repeat Simple_repeat 1 771 0 191 277 0 21 chr2 9157692 9157739 -241530115 - MIR SINE MIR -144 64 19 2316 104 0 13 chr2 9158538 9158837 -241529017 + AluSq SINE Alu 2 296 -17 555 313 61 39 chr2 9159302 9159714 -241528140 + L1MEc LINE L1 778 1198 -5940 862 208 66 4 chr2 9159870 9160093 -241527761 - L1ME1 LINE L1 0 6178 5948 492 286 46 14 chr2 9160117 9160378 -241527476 + L1MEc LINE L1 1331 1467 -5392 2228 113 0 0 chr2 9160378 9160670 -241527184 + AluSx SINE Alu 1 292 -20 492 286 46 14 chr2 9160670 9160697 -241527157 + L1MEc LINE L1 1467 1492 -5367 2228 118 7 0 chr2 9161058 9161345 -241526509 - AluSx SINE Alu -23 289 1 676 298 106 12 chr2 9161520 9161842 -241526012 - L1ME1 LINE L1 -234 5887 5536 201 279 0 40 chr2 9162687 9162990 -241524864 + (CGGG)n Simple_repeat Simple_repeat 1 290 0 426 317 0 28 chr2 9163148 9163328 -241524526 + (CGGG)n Simple_repeat Simple_repeat 4 178 0 360 344 0 32 chr2 9163343 9163529 -241524325 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 289 333 0 32 chr2 9163604 9163790 -241524064 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 440 324 0 27 chr2 9163993 9164178 -241523676 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 279 359 0 28 chr2 9164278 9164459 -241523395 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 383 352 0 29 chr2 9164783 9165249 -241522605 + (CGGG)n Simple_repeat Simple_repeat 1 452 0 439 323 0 28 chr2 9165278 9165649 -241522205 + (CGGG)n Simple_repeat Simple_repeat 1 360 0 308 344 0 27 chr2 9165672 9165855 -241521999 + (TGGG)n Simple_repeat Simple_repeat 1 178 0 240 356 0 28 chr2 9165824 9166004 -241521850 + (CGGG)n Simple_repeat Simple_repeat 2 176 0 * 348 297 0 30 chr2 9166120 9166285 -241521569 + (CCCG)n Simple_repeat Simple_repeat 2 161 0 390 306 0 38 chr2 9166312 9166495 -241521359 + (CCCG)n Simple_repeat Simple_repeat 1 176 0 394 340 0 30 chr2 9166550 9167360 -241520494 + (CCCG)n Simple_repeat Simple_repeat 1 785 0 477 297 0 32 chr2 9167378 9167563 -241520291 + (CCCG)n Simple_repeat Simple_repeat 2 180 0 763 239 78 58 chr2 9168974 9169334 -241518520 - L1ME2 LINE L1 -9 6155 5789 3160 244 53 41 chr2 9169334 9170363 -241517491 + L1MC4 LINE L1 227 1268 -5274 1286 165 134 15 chr2 9170611 9170732 -241517122 + AluJo SINE Alu 1 106 -206 321 26 0 0 chr2 9170732 9170770 -241517084 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1286 165 134 15 chr2 9170770 9170909 -241516945 + AluJo SINE Alu 106 292 -20 659 229 42 49 chr2 9171380 9171668 -241516186 + pTR5 LTR ERV1 743 1028 -1410 4685 104 20 40 chr2 9171851 9172553 -241515301 + LTR12 LTR ERV1 1 688 0 1129 223 34 10 chr2 9172600 9172956 -241514898 - ERVL-B2 LTR ERVL -5288 366 6 688 140 171 49 chr2 9172967 9173131 -241514723 - MLT2B2 LTR ERVL -12 503 320 340 193 181 0 chr2 9173165 9173248 -241514606 - LTR33 LTR ERVL -422 99 2 329 238 49 25 chr2 9173319 9173441 -241514413 - LTR33 LTR ERVL 0 521 397 474 305 5 63 chr2 9173708 9173931 -241513923 - L2 LINE L2 -27 3286 3077 849 289 48 38 chr2 9173934 9174328 -241513526 - ERVL LTR ERVL -2795 2969 2572 581 288 81 0 chr2 9174612 9174772 -241513082 - L2 LINE L2 -544 2770 2598 243 320 72 0 chr2 9174958 9175055 -241512799 - L2 LINE L2 -6 3266 3163 27 0 0 0 chr2 9176681 9176708 -241511146 + AT_rich Low_complexity Low_complexity 1 27 0 692 276 35 43 chr2 9177571 9177803 -241510051 + MIR SINE MIR 33 262 0 1764 188 0 7 chr2 9177844 9178132 -241509722 + AluJo SINE Alu 13 298 -14 207 170 43 0 chr2 9178234 9178281 -241509573 + A-rich Low_complexity Low_complexity 4 52 0 413 188 1 79 chr2 9179208 9179318 -241508536 + L1MC4 LINE L1 2206 7201 -1339 287 646 0 0 chr2 9179326 9179504 -241508350 + (TA)n Simple_repeat Simple_repeat 2 179 0 216 0 0 0 chr2 9179504 9179528 -241508326 + (CA)n Simple_repeat Simple_repeat 1 24 0 2381 81 13 3 chr2 9180103 9180412 -241507442 - AluSx SINE Alu 0 312 1 502 281 79 35 chr2 9180586 9180814 -241507040 + L2 LINE L2 3072 3309 -4 267 300 108 23 chr2 9182181 9182311 -241505543 - MIR3 SINE MIR -46 162 22 1829 140 48 24 chr2 9182350 9182642 -241505212 - AluJb SINE Alu -13 299 1 378 0 0 0 chr2 9184053 9184095 -241503759 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1050 182 0 0 chr2 9184095 9184271 -241503583 + FRAM SINE Alu 1 174 -2 448 189 56 0 chr2 9184399 9184489 -241503365 + L1MC4 LINE L1 7472 7566 -974 1426 241 110 3 chr2 9184490 9185072 -241502782 + L1MC4 LINE L1 7713 8398 -142 272 180 0 0 chr2 9185073 9185123 -241502731 + L1MC4 LINE L1 8481 8530 -10 189 0 0 0 chr2 9185130 9185151 -241502703 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 651 306 5 5 chr2 9185376 9185575 -241502279 + MER58A DNA MER1_type 26 224 0 21 0 0 0 chr2 9186402 9186423 -241501431 + AT_rich Low_complexity Low_complexity 1 21 0 2380 90 3 7 chr2 9187955 9188256 -241499598 + AluSq SINE Alu 1 300 -13 2147 114 13 7 chr2 9188556 9188854 -241499000 + AluSx SINE Alu 1 300 -12 963 281 97 45 chr2 9189530 9190017 -241497837 + L1MEc LINE L1 37 548 -5848 475 177 104 10 chr2 9190203 9190299 -241497555 - AluSg1 SINE Alu -201 108 4 778 263 7 58 chr2 9190303 9190332 -241497522 + L1M4 LINE L1 3545 3574 -2572 1954 157 10 13 chr2 9190332 9190645 -241497209 + AluSx SINE Alu 1 312 0 778 263 7 58 chr2 9190645 9190923 -241496931 + L1M4 LINE L1 3574 3836 -2310 1473 185 49 28 chr2 9190926 9191212 -241496642 + AluJb SINE Alu 21 312 0 1289 275 56 26 chr2 9191256 9191398 -241496456 + L1M4 LINE L1 4752 4888 -1270 1930 149 3 23 chr2 9191398 9191700 -241496154 - AluSx SINE Alu -2 310 15 1289 275 56 26 chr2 9191700 9191985 -241495869 + L1M4 LINE L1 4888 5211 -947 1758 170 20 7 chr2 9191985 9192285 -241495569 + AluJo SINE Alu 1 304 -8 1289 275 56 26 chr2 9192285 9192497 -241495357 + L1M4 LINE L1 5211 5415 -743 294 227 6 3 chr2 9192498 9192563 -241495291 + AluJ/monomer SINE Alu 1 53 -250 * 830 135 0 23 chr2 9192562 9192695 -241495159 + THE1B LTR MaLR 235 364 0 792 221 181 18 chr2 9192699 9193025 -241494829 - L2 LINE L2 -1734 1580 1202 1725 249 94 50 chr2 9193046 9193512 -241494342 - Charlie7 DNA MER1_type -838 1774 1261 2653 50 0 0 chr2 9193512 9193815 -241494039 - AluY SINE Alu -8 303 1 1725 249 94 50 chr2 9193815 9194106 -241493748 - Charlie7 DNA MER1_type -1351 1261 984 2413 101 3 0 chr2 9194340 9194647 -241493207 + AluSx SINE Alu 1 308 -4 268 299 234 16 chr2 9195276 9195460 -241492394 - MIR SINE MIR 0 262 39 6722 117 26 15 chr2 9195894 9196767 -241491087 - L1MA2 LINE L1 0 6304 5442 2151 109 3 16 chr2 9196767 9197092 -241490762 - AluSc SINE Alu 0 309 1 6722 117 26 15 chr2 9197092 9198152 -241489702 - L1MA2 LINE L1 -862 5442 4342 2344 112 0 0 chr2 9198246 9198550 -241489304 - AluSx SINE Alu -8 304 1 23 33 0 0 chr2 9198602 9198632 -241489222 + AT_rich Low_complexity Low_complexity 1 30 0 2182 271 205 12 chr2 9198701 9199819 -241488035 - L2 LINE L2 -519 2795 1463 444 283 58 52 chr2 9199989 9200180 -241487674 + MIR SINE MIR 21 212 -50 265 294 92 8 chr2 9200791 9200910 -241486944 - MIR SINE MIR -64 144 16 980 78 0 0 chr2 9201243 9201559 -241486295 + AluSg SINE Alu 1 316 0 565 266 126 61 chr2 9201559 9202081 -241485773 + HAL1 LINE L1 1723 2278 -229 180 174 130 0 chr2 9202128 9202174 -241485680 + L2 LINE L2 2191 2242 -1072 1489 231 89 4 chr2 9202369 9202871 -241484983 - L1ME1 LINE L1 -11 6155 5567 512 183 16 0 chr2 9202871 9202997 -241484857 + CT-rich Low_complexity Low_complexity 3 130 0 1837 127 6 74 chr2 9203016 9203339 -241484515 - AluJo SINE Alu -6 306 6 3065 204 55 40 chr2 9203346 9203634 -241484220 - L1ME1 LINE L1 -585 5581 5299 2254 114 10 0 chr2 9203634 9203933 -241483921 - AluSx SINE Alu -10 302 1 3065 204 55 40 chr2 9203933 9204563 -241483291 - L1ME1 LINE L1 -867 5299 4637 733 179 7 57 chr2 9204563 9204703 -241483151 - FLAM_C SINE Alu 0 133 1 3065 204 55 40 chr2 9204703 9204930 -241482924 - L1ME1 LINE L1 -1529 4637 4415 204 40 0 0 chr2 9204942 9204967 -241482887 + (TG)n Simple_repeat Simple_repeat 1 25 0 285 75 0 0 chr2 9204967 9205007 -241482847 + (GA)n Simple_repeat Simple_repeat 2 41 0 2393 110 0 0 chr2 9205559 9205869 -241481985 + AluSg SINE Alu 1 310 0 22 35 0 0 chr2 9205892 9205921 -241481933 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 9206261 9206282 -241481572 + AT_rich Low_complexity Low_complexity 1 21 0 265 253 42 21 chr2 9207075 9207170 -241480684 - MIR SINE MIR -60 148 52 303 28 0 0 chr2 9207600 9207636 -241480218 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 2031 102 47 0 chr2 9207639 9207914 -241479940 - AluSq SINE Alu -25 288 1 2530 88 0 0 chr2 9207969 9208277 -241479577 - AluSx SINE Alu -4 308 1 323 280 50 0 chr2 9208500 9208600 -241479254 + MIR SINE MIR 117 221 -41 2264 108 0 22 chr2 9208692 9209006 -241478848 + AluSx SINE Alu 1 307 -5 205 292 124 18 chr2 9209127 9209240 -241478614 + MIR3 SINE MIR 69 193 -15 847 136 73 12 chr2 9209694 9209864 -241477990 - MSTC LTR MaLR -229 167 2 1378 137 5 0 chr2 9209915 9210119 -241477735 + MER2 DNA MER2_type 2 206 -139 1617 176 10 19 chr2 9210133 9210440 -241477414 - AluSx SINE Alu -8 304 1 34 34 0 17 chr2 9210440 9210468 -241477386 + AT_rich Low_complexity Low_complexity 1 28 -30 2405 86 0 3 chr2 9210468 9210771 -241477083 + AluSq SINE Alu 7 308 -5 34 34 0 17 chr2 9210771 9210801 -241477053 + AT_rich Low_complexity Low_complexity 28 58 0 256 208 57 0 chr2 9210801 9210854 -241477000 + MER2 DNA MER2_type 266 321 -24 220 385 99 0 chr2 9211060 9211273 -241476581 - MIR SINE MIR -13 249 16 204 139 0 47 chr2 9211276 9211319 -241476535 + (CCCCCG)n Simple_repeat Simple_repeat 2 42 0 873 88 0 61 chr2 9212085 9212214 -241475640 + FRAM SINE Alu 36 157 -155 2933 16 0 0 chr2 9212214 9212532 -241475322 + AluYb8 SINE Alu 1 318 0 873 88 0 61 chr2 9212532 9212549 -241475305 + FRAM SINE Alu 157 173 -3 315 123 92 15 chr2 9212589 9212654 -241475200 + MLT1C LTR MaLR 181 250 -217 2112 125 17 0 chr2 9212832 9213121 -241474733 - AluSg SINE Alu -16 294 1 766 231 43 70 chr2 9213225 9213792 -241474062 - L1MC5 LINE L1 -30 7931 7331 1955 90 128 0 chr2 9213803 9214069 -241473785 + AluSx SINE Alu 1 300 -12 256 140 0 70 chr2 9214072 9214129 -241473725 - L1MC5 LINE L1 -610 7351 7299 * 39028 73 17 10 chr2 9214121 9216390 -241471464 - L1PA6 LINE L1 -2 6152 3901 288 0 0 0 chr2 9216390 9216422 -241471432 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2265 82 0 0 chr2 9216424 9216705 -241471149 - AluY SINE Alu -30 281 1 39028 73 17 10 chr2 9216705 9220532 -241467322 - L1PA6 LINE L1 -2253 3901 12 255 250 0 83 chr2 9221527 9221635 -241466219 + L1P LINE L1 4951 5049 -1097 296 291 112 24 chr2 9221703 9221788 -241466066 + L1ME1 LINE L1 5255 5331 -2477 2646 56 0 0 chr2 9221788 9222094 -241465760 + AluY SINE Alu 1 306 -5 296 291 112 24 chr2 9222094 9222214 -241465640 + L1ME1 LINE L1 5331 5478 -2330 769 288 98 31 chr2 9222268 9222879 -241464975 - L2 LINE L2 0 3313 2656 1869 155 26 3 chr2 9222973 9223277 -241464577 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 9223286 9223307 -241464547 + AT_rich Low_complexity Low_complexity 1 21 0 2429 55 17 0 chr2 9223312 9223603 -241464251 - AluY SINE Alu -15 296 1 791 164 0 22 chr2 9223848 9223982 -241463872 - FLAM_C SINE Alu -2 131 1 1399 181 8 17 chr2 9223982 9224274 -241463580 + L1ME1 LINE L1 5575 5856 -312 690 178 55 7 chr2 9225039 9225185 -241462669 + MER5A DNA MER1_type 1 153 -36 2072 126 0 10 chr2 9225803 9226097 -241461757 + AluSx SINE Alu 5 295 -17 186 71 0 0 chr2 9228047 9228075 -241459779 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 362 293 149 14 chr2 9228669 9228884 -241458970 - MIR SINE MIR -4 258 15 205 356 30 10 chr2 9229447 9229548 -241458306 + L2 LINE L2 2900 3002 -270 2298 81 0 33 chr2 9230357 9230664 -241457190 + AluSx SINE Alu 1 297 -15 1239 259 72 98 chr2 9231835 9232502 -241455352 + L1MEc LINE L1 142 791 -5605 1980 134 24 3 chr2 9233331 9233621 -241454233 + AluSx SINE Alu 1 296 -16 1430 185 4 8 chr2 9233630 9233879 -241453975 + AluJb SINE Alu 35 282 -30 1985 123 3 3 chr2 9233886 9234193 -241453661 + AluSx SINE Alu 1 307 0 1863 158 7 20 chr2 9235521 9235824 -241452030 - AluJb SINE Alu -13 299 1 2212 87 10 27 chr2 9236430 9236729 -241451125 - AluSq SINE Alu -19 294 1 664 191 107 6 chr2 9237884 9238052 -241449802 + MER5A DNA MER1_type 1 185 -4 395 204 31 122 chr2 9238064 9238260 -241449594 - MER5B DNA MER1_type 0 178 1 560 236 185 34 chr2 9238951 9239129 -241448725 - MER58A DNA MER1_type -15 209 5 1613 139 93 14 chr2 9241090 9241370 -241446484 + AluJo SINE Alu 1 302 -10 1287 89 48 0 chr2 9241431 9241599 -241446255 - AluSg/x SINE Alu -9 303 128 2332 92 0 0 chr2 9241601 9241895 -241445959 - AluSq SINE Alu -19 294 1 2363 99 36 30 chr2 9242411 9242773 -241445081 + THE1B LTR MaLR 1 364 0 2163 112 0 7 chr2 9242981 9243275 -241444579 + AluSx SINE Alu 1 292 -20 425 189 57 9 chr2 9244574 9244680 -241443174 - MIR SINE MIR -74 188 78 2090 128 0 28 chr2 9244686 9245006 -241442848 - AluSq SINE Alu -2 311 1 236 287 11 32 chr2 9246407 9246501 -241441353 - MIR3 SINE MIR -115 93 2 2569 53 0 3 chr2 9250458 9250758 -241437096 + AluY SINE Alu 1 299 -12 194 211 0 26 chr2 9251311 9251349 -241436505 + L2 LINE L2 3211 3247 -25 260 95 0 0 chr2 9252665 9252707 -241435147 + L1MA5 LINE L1 6255 6296 -4 2125 112 0 13 chr2 9254179 9254484 -241433370 - AluSx SINE Alu -11 301 1 274 304 81 31 chr2 9254804 9255014 -241432840 - MIR SINE MIR 0 262 44 395 340 33 0 chr2 9255473 9255626 -241432228 - MIR3 SINE MIR -7 201 44 995 169 22 38 chr2 9257234 9257417 -241430437 + MER58A DNA MER1_type 44 223 -1 185 216 81 0 chr2 9257757 9257794 -241430060 - MIR3 SINE MIR -30 178 139 675 255 192 5 chr2 9259877 9260085 -241427769 + MIR SINE MIR 16 262 0 2289 96 0 0 chr2 9260131 9260443 -241427411 - AluSq SINE Alu -1 312 1 226 252 81 27 chr2 9260856 9260967 -241426887 + L1MC5 LINE L1 7791 7907 -54 1675 146 7 29 chr2 9262129 9262437 -241425417 + AluJb SINE Alu 11 311 -1 2239 78 0 7 chr2 9262891 9263186 -241424668 + AluSc SINE Alu 1 293 -16 1532 188 40 13 chr2 9263309 9263612 -241424242 + AluJo SINE Alu 1 311 -1 1068 148 13 91 chr2 9264062 9264292 -241423562 - AluJb SINE Alu -18 294 83 303 271 19 0 chr2 9264374 9264481 -241423373 + L1MC4 LINE L1 7934 8042 0 306 220 114 53 chr2 9267872 9268004 -241419850 - L1MD3 LINE L1 0 7995 7856 24 32 0 0 chr2 9268628 9268659 -241419195 + GC_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 9268703 9268727 -241419127 + GC_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr2 9269065 9269095 -241418759 + GC_rich Low_complexity Low_complexity 1 30 0 235 301 5 54 chr2 9269229 9269415 -241418439 + C-rich Low_complexity Low_complexity 4 180 0 25 0 0 0 chr2 9269692 9269717 -241418137 + GC_rich Low_complexity Low_complexity 1 25 0 208 265 163 10 chr2 9269822 9269920 -241417934 - L2 LINE L2 -43 3270 3158 1832 247 166 31 chr2 9269964 9270823 -241417031 - L2 LINE L2 -338 2976 2002 2243 106 0 0 chr2 9271040 9271351 -241416503 - AluSx SINE Alu -1 311 1 280 244 56 0 chr2 9271379 9271469 -241416385 - MER113 DNA MER1_type? -420 101 7 459 293 110 62 chr2 9271662 9271952 -241415902 + L2 LINE L2 2966 3269 -3 1660 159 37 10 chr2 9272290 9272460 -241415394 - AluJb SINE Alu -8 304 121 192 77 0 0 chr2 9272460 9272486 -241415368 + (TG)n Simple_repeat Simple_repeat 2 27 0 1660 159 37 10 chr2 9272486 9272611 -241415243 - AluJb SINE Alu -191 121 1 2147 103 7 0 chr2 9272694 9272994 -241414860 + AluSx SINE Alu 2 303 -9 615 272 94 89 chr2 9273072 9273501 -241414353 - L1MC4a LINE L1 -1760 6048 5613 2035 122 0 0 chr2 9273501 9273797 -241414057 - AluSq SINE Alu -9 304 9 615 272 94 89 chr2 9273797 9274039 -241413815 - L1MC4a LINE L1 -2195 5613 5374 346 301 0 0 chr2 9274225 9274308 -241413546 + MIR SINE MIR 31 113 -95 188 270 167 16 chr2 9274354 9274480 -241413374 + L2 LINE L2 2955 3099 -173 325 236 176 23 chr2 9275017 9275188 -241412666 + MIR SINE MIR 34 231 -31 231 367 37 18 chr2 9275228 9275337 -241412517 + L2 LINE L2 3141 3251 -21 405 322 87 7 chr2 9275404 9275553 -241412301 - MIR SINE MIR -57 205 45 203 358 46 18 chr2 9326150 9326259 -241361595 - MER5A DNA MER1_type -30 159 48 298 297 0 0 chr2 9326304 9326378 -241361476 - MER5B DNA MER1_type 0 178 105 180 0 0 0 chr2 9326894 9326914 -241360940 + (T)n Simple_repeat Simple_repeat 1 20 0 2222 84 30 0 chr2 9327087 9327383 -241360471 + AluSq SINE Alu 1 305 -8 355 280 37 112 chr2 9327818 9328032 -241359822 + L1MEd LINE L1 867 1064 -5055 487 195 46 0 chr2 9328412 9328499 -241359355 + 7SLRNA srpRNA srpRNA 1 91 -229 1488 173 14 25 chr2 9329688 9329972 -241357882 + AluJo SINE Alu 11 291 -21 309 316 65 7 chr2 9330099 9330254 -241357600 + MLT1K LTR MaLR 357 520 -68 241 319 64 0 chr2 9330307 9330401 -241357453 - MIR SINE MIR -68 194 95 1904 131 7 13 chr2 9331188 9331358 -241356496 - AluSx SINE Alu -9 303 134 2222 97 3 0 chr2 9331358 9331657 -241356197 - AluSp SINE Alu -13 300 1 1904 131 7 13 chr2 9331657 9331791 -241356063 - AluSx SINE Alu -178 134 1 242 311 59 17 chr2 9331834 9331953 -241355901 + MIR SINE MIR 73 196 -66 549 241 45 75 chr2 9331973 9332016 -241355838 - L1MB8 LINE L1 -27 6151 6108 2136 106 7 0 chr2 9332016 9332308 -241355546 + AluSx SINE Alu 1 294 -18 549 241 45 75 chr2 9332308 9332463 -241355391 - L1MB8 LINE L1 -70 6108 5959 814 216 154 10 chr2 9333062 9333157 -241354697 + MER58 DNA MER1_type 1 81 -260 2268 87 3 6 chr2 9333157 9333468 -241354386 + AluY SINE Alu 1 310 -1 814 216 154 10 chr2 9333468 9333580 -241354274 + MER58 DNA MER1_type 81 238 -103 199 346 59 10 chr2 9334379 9334480 -241353374 + MIR3 SINE MIR 13 118 -90 207 0 0 0 chr2 9334968 9334991 -241352863 + (CTGGGG)n Simple_repeat Simple_repeat 2 24 0 374 289 209 13 chr2 9335001 9335606 -241352248 - L2 LINE L2 -9 3304 2564 2119 98 0 0 chr2 9336053 9336363 -241351491 - AluY SINE Alu 0 311 1 493 291 126 54 chr2 9336372 9336722 -241351132 + L2 LINE L2 2896 3270 -2 2247 79 10 0 chr2 9336865 9337156 -241350698 - AluSc SINE Alu -15 294 1 224 175 16 32 chr2 9338244 9338307 -241349547 + GA-rich Low_complexity Low_complexity 1 62 0 260 313 0 49 chr2 9338588 9338732 -241349122 + MER112 DNA MER1_type 118 254 -6 440 286 16 8 chr2 9339335 9339461 -241348393 - MIR SINE MIR -121 141 15 349 274 20 20 chr2 9339529 9339631 -241348223 + MER5B DNA MER1_type 77 178 0 2134 105 13 0 chr2 9340137 9340441 -241347413 - AluSc SINE Alu -1 308 1 1495 144 83 11 chr2 9340465 9340754 -241347100 - AluJo SINE Alu 0 308 1 474 222 0 0 chr2 9340765 9340846 -241347008 - AluJ/FLAM SINE Alu -228 84 4 903 281 106 59 chr2 9341017 9341053 -241346801 - HAL1b LINE L1 -461 887 854 2236 113 3 0 chr2 9341053 9341364 -241346490 + AluSx SINE Alu 1 312 0 903 281 106 59 chr2 9341364 9342111 -241345743 - HAL1b LINE L1 -494 854 67 2132 117 0 0 chr2 9342320 9342619 -241345235 - AluSx SINE Alu -13 299 1 888 129 0 0 chr2 9343222 9343354 -241344500 + AluSq/x SINE Alu 1 132 -181 2206 97 3 0 chr2 9343356 9343655 -241344199 + AluY SINE Alu 1 300 -11 2453 232 68 55 chr2 9343716 9344007 -241343847 - L1ME1 LINE L1 -5 6161 5875 2222 88 7 3 chr2 9344007 9344303 -241343551 - AluSq SINE Alu -16 297 1 2453 232 68 55 chr2 9344303 9344486 -241343368 - L1ME1 LINE L1 -291 5875 5696 2091 106 3 13 chr2 9344486 9344788 -241343066 - AluSg SINE Alu -11 299 1 2453 232 68 55 chr2 9344788 9345128 -241342726 - L1ME1 LINE L1 -470 5696 5322 2322 90 0 0 chr2 9345128 9345438 -241342416 - AluY SINE Alu -1 310 1 2453 232 68 55 chr2 9345438 9345663 -241342191 - L1ME1 LINE L1 -844 5322 5101 1889 154 20 0 chr2 9345667 9345973 -241341881 - AluSx SINE Alu 0 312 1 1182 148 118 4 chr2 9346003 9346240 -241341614 + L1M2 LINE L1 5509 5772 -540 2044 129 0 7 chr2 9346240 9346534 -241341320 + AluSx SINE Alu 1 292 -20 323 208 57 9 chr2 9346559 9346665 -241341189 - L1ME1 LINE L1 -1095 5051 4941 1045 196 30 4 chr2 9347021 9347256 -241340598 + L1MB4 LINE L1 5940 6180 0 2014 101 0 80 chr2 9347382 9347708 -241340146 + AluSx SINE Alu 1 300 -12 2373 66 3 3 chr2 9347879 9348184 -241339670 - AluSp SINE Alu -6 307 3 1396 74 133 0 chr2 9349327 9349530 -241338324 + MER30 DNA MER1_type 1 230 0 186 43 0 0 chr2 9349829 9349852 -241338002 + (ATTG)n Simple_repeat Simple_repeat 1 23 0 1566 149 18 21 chr2 9349853 9350134 -241337720 - AluJb SINE Alu -32 280 1 2410 73 0 6 chr2 9350203 9350520 -241337334 - AluYb8 SINE Alu -3 315 1 1113 263 77 27 chr2 9350527 9350968 -241336886 - L1ME3A LINE L1 -6 6164 5702 189 178 0 0 chr2 9351139 9351184 -241336670 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 341 338 47 27 chr2 9351228 9351376 -241336478 - MIR SINE MIR -15 247 97 262 267 130 8 chr2 9351366 9351497 -241336357 + MIR SINE MIR 96 242 -20 * 190 261 43 0 chr2 9351532 9351578 -241336276 - MIR SINE MIR -174 88 41 306 232 14 0 chr2 9352812 9352881 -241334973 + MER103 DNA DNA 17 86 -80 1851 146 34 3 chr2 9354253 9354548 -241333306 - AluJb SINE Alu -8 304 1 381 206 0 0 chr2 9354786 9354888 -241332966 + (CA)n Simple_repeat Simple_repeat 1 102 0 270 311 61 2 chr2 9354965 9355084 -241332770 - MIR SINE MIR -56 152 28 286 276 92 10 chr2 9355558 9355656 -241332198 + MIR SINE MIR 11 116 -146 367 266 37 0 chr2 9355890 9355999 -241331855 + MIR3 SINE MIR 44 156 -52 344 136 15 30 chr2 9356684 9356750 -241331104 + MIR SINE MIR 81 145 -63 279 314 99 8 chr2 9356996 9357117 -241330737 + MIR SINE MIR 28 159 -103 417 190 0 0 chr2 9357192 9357292 -241330562 + (TG)n Simple_repeat Simple_repeat 1 100 0 436 262 160 27 chr2 9357402 9357627 -241330227 + MIR SINE MIR 8 262 0 1541 154 4 0 chr2 9358200 9358440 -241329414 - AluJb SINE Alu -71 241 1 218 329 150 7 chr2 9358857 9358997 -241328857 + L3 LINE CR1 1138 1297 -280 288 289 168 13 chr2 9359739 9359888 -241327966 - MIR SINE MIR -70 192 21 264 333 23 0 chr2 9360354 9360441 -241327413 + L2 LINE L2 3182 3270 -2 1091 160 14 89 chr2 9361241 9361522 -241326332 + MER31A LTR ERV1 216 475 -10 1867 139 13 30 chr2 9362164 9362467 -241325387 - AluJb SINE Alu -14 298 1 330 328 39 8 chr2 9364978 9365106 -241322748 - L2 LINE L2 -2 3311 3180 213 260 32 99 chr2 9365286 9365464 -241322390 + MIR SINE MIR 7 162 -46 640 217 14 0 chr2 9365942 9366085 -241321769 - MER45A DNA AcHobo -31 147 3 639 238 67 6 chr2 9366227 9366391 -241321463 + MIR SINE MIR 23 196 -66 925 240 93 13 chr2 9367155 9367468 -241320386 + MLT1A2 LTR MaLR 3 340 -34 1778 147 40 17 chr2 9367780 9368080 -241319774 + AluJo SINE Alu 1 307 -5 262 239 11 11 chr2 9368254 9368267 -241319587 - L1MA10 LINE L1 -1 6333 6321 1603 227 37 64 chr2 9368267 9368554 -241319300 - L1ME3 LINE L1 -4 6158 5865 3188 147 18 72 chr2 9368554 9368789 -241319065 - L1MB3 LINE L1 -7 6176 5930 1953 124 3 29 chr2 9368789 9369095 -241318759 - AluSx SINE Alu -14 298 1 3188 147 18 72 chr2 9369095 9369460 -241318394 - L1MB3 LINE L1 -253 5930 5613 2343 66 3 0 chr2 9369460 9369748 -241318106 - AluSp SINE Alu -15 298 10 3188 147 18 72 chr2 9369748 9369813 -241318041 - L1MB3 LINE L1 -570 5613 5546 1603 227 37 64 chr2 9369813 9370115 -241317739 - L1ME3 LINE L1 -297 5865 5585 2089 121 0 0 chr2 9370153 9370482 -241317372 + AluSx SINE Alu 1 329 0 927 266 84 12 chr2 9370546 9370881 -241316973 - L1MD2 LINE L1 -2 6357 5999 270 136 0 0 chr2 9370883 9370927 -241316927 + (TCCC)n Simple_repeat Simple_repeat 3 46 0 1176 143 0 0 chr2 9370939 9371107 -241316747 - AluSx SINE Alu -140 172 5 2366 54 0 17 chr2 9371111 9371409 -241316445 - AluY SINE Alu -12 299 7 2179 127 0 0 chr2 9371413 9371712 -241316142 - AluSx SINE Alu -13 299 1 1268 236 58 42 chr2 9371742 9371899 -241315955 - L1MD2 LINE L1 -365 5994 5841 2129 184 17 0 chr2 9371899 9372258 -241315596 + MLT1A1 LTR MaLR 1 365 0 1268 236 58 42 chr2 9372258 9372340 -241315514 - L1MD2 LINE L1 -518 5841 5762 2149 107 7 0 chr2 9372340 9372640 -241315214 - AluSx SINE Alu -10 302 1 1268 236 58 42 chr2 9372640 9372781 -241315073 - L1MD2 LINE L1 -597 5762 5607 284 218 0 0 chr2 9372791 9372846 -241315008 - Tigger5 DNA MER2_type 0 2323 2269 545 176 0 4 chr2 9372850 9372990 -241314864 - Tigger5 DNA MER2_type -2129 194 3 210 37 0 0 chr2 9373943 9373970 -241313884 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2041 121 3 0 chr2 9373974 9374256 -241313598 - AluSx SINE Alu -29 283 1 561 245 41 0 chr2 9374330 9374477 -241313377 - MIR SINE MIR -43 219 67 570 220 86 116 chr2 9374519 9374735 -241313119 - L1M4 LINE L1 -2884 3262 3025 242 114 0 0 chr2 9374735 9374770 -241313084 - Alu SINE Alu -207 95 61 570 220 86 116 chr2 9374770 9374891 -241312963 - L1M4 LINE L1 -3121 3025 2902 1925 153 0 6 chr2 9374942 9375255 -241312599 - AluJo SINE Alu -1 311 1 1460 130 0 49 chr2 9375320 9375593 -241312261 + AluSg/x SINE Alu 74 310 0 338 163 12 75 chr2 9375612 9375692 -241312162 + MLT1D LTR MaLR 393 505 0 696 161 0 9 chr2 9375730 9375842 -241312012 + FLAM_A SINE Alu 25 135 -7 1830 157 27 3 chr2 9376085 9376384 -241311470 + AluJo SINE Alu 1 306 -6 614 133 0 14 chr2 9376757 9376997 -241310857 + AluSx SINE Alu 1 292 -18 2398 70 0 13 chr2 9376997 9377310 -241310544 + AluY SINE Alu 1 309 -2 306 200 8 144 chr2 9377583 9377708 -241310146 - MER81 DNA DNA 0 114 7 240 291 58 0 chr2 9377963 9378049 -241309805 - MIR3 SINE MIR -27 181 91 200 292 14 56 chr2 9378078 9378150 -241309704 + MIR3 SINE MIR 4 72 -136 255 150 0 0 chr2 9378425 9378485 -241309369 + (GA)n Simple_repeat Simple_repeat 2 61 0 205 262 12 48 chr2 9378892 9378976 -241308878 + C-rich Low_complexity Low_complexity 1 81 0 335 282 0 13 chr2 9379335 9379413 -241308441 + MIR3 SINE MIR 81 157 -51 1533 72 0 43 chr2 9379436 9379644 -241308210 - AluSc SINE Alu -110 199 1 328 313 87 33 chr2 9379795 9379945 -241307909 + MIR SINE MIR 105 262 0 200 275 110 11 chr2 9380813 9380904 -241306950 + MIR SINE MIR 85 184 -78 889 196 16 37 chr2 9381070 9381259 -241306595 + MER5A DNA MER1_type 5 189 0 1254 226 36 33 chr2 9381434 9381796 -241306058 - MLT1B LTR MaLR -11 379 17 212 378 124 28 chr2 9382139 9382356 -241305498 - MIR SINE MIR -5 257 20 287 336 80 0 chr2 9382831 9382956 -241304898 + MIR SINE MIR 79 213 -49 327 330 52 0 chr2 9382985 9383082 -241304772 + L2 LINE L2 3159 3260 -12 844 142 17 17 chr2 9383120 9383296 -241304558 + (ATGGTG)n Simple_repeat Simple_repeat 1 176 0 954 157 0 0 chr2 9383305 9383483 -241304371 + (TGG)n Simple_repeat Simple_repeat 3 180 0 704 148 11 28 chr2 9383501 9383677 -241304177 + (ATGGTG)n Simple_repeat Simple_repeat 1 173 0 725 184 0 17 chr2 9383711 9383885 -241303969 + (ATGGTG)n Simple_repeat Simple_repeat 3 173 0 487 209 0 37 chr2 9383922 9384085 -241303769 + (ATGGTG)n Simple_repeat Simple_repeat 4 160 0 251 245 10 71 chr2 9384435 9384533 -241303321 + MIR SINE MIR 29 120 -142 267 314 81 0 chr2 9386348 9386472 -241301382 + LTR33 LTR ERVL 45 178 -343 288 336 33 0 chr2 9386588 9386710 -241301144 + LTR33 LTR ERVL 344 469 -52 191 261 76 43 chr2 9388057 9388149 -241299705 + MIR SINE MIR 43 137 -71 185 336 9 56 chr2 9388694 9388801 -241299053 - L2 LINE L2 -252 3020 2919 204 287 117 21 chr2 9390338 9390432 -241297422 + MIR SINE MIR 102 204 -58 1322 165 4 17 chr2 9391595 9391832 -241296022 - AluJb SINE Alu -15 297 64 1414 168 10 1 chr2 9391832 9392230 -241295624 - LTR19A LTR ERV1 -6 480 1 857 134 6 0 chr2 9392230 9392406 -241295448 - HERVFH19I LTR ERV1 0 7719 4796 * 7905 178 50 42 chr2 9392405 9392689 -241295165 - HERVFH19I LTR ERV1 -283 5417 5137 2477 71 3 0 chr2 9392689 9392999 -241294855 + AluY SINE Alu 1 311 0 7905 178 50 42 chr2 9392999 9393032 -241294822 - HERVFH19I LTR ERV1 -563 5137 5106 2044 131 3 0 chr2 9393032 9393322 -241294532 - AluSq SINE Alu -22 291 1 7905 178 50 42 chr2 9393322 9394054 -241293800 - HERVFH19I LTR ERV1 -594 5106 4382 2202 118 0 6 chr2 9394054 9394368 -241293486 + AluSx SINE Alu 1 312 0 7905 178 50 42 chr2 9394368 9395511 -241292343 - HERVFH19I LTR ERV1 -1318 4382 2865 2739 116 98 0 chr2 9395570 9396011 -241291843 - LTR19A LTR ERV1 0 486 3 486 149 0 0 chr2 9396013 9396087 -241291767 - AluJ/FLAM SINE Alu -238 74 1 670 240 36 26 chr2 9396463 9396655 -241291199 + MIR SINE MIR 14 207 -55 2080 108 0 7 chr2 9396658 9396946 -241290908 + AluSg SINE Alu 1 286 -24 237 33 0 0 chr2 9396946 9396976 -241290878 + (CATA)n Simple_repeat Simple_repeat 2 31 0 233 216 21 52 chr2 9397214 9397311 -241290543 + LTR67 LTR ERVL 442 535 -22 406 324 29 0 chr2 9397442 9397581 -241290273 - L2 LINE L2 -181 3091 2949 2106 125 0 3 chr2 9398869 9399182 -241288672 - AluSx SINE Alu 0 312 1 2093 77 0 0 chr2 9399191 9399452 -241288402 + AluY SINE Alu 38 298 -13 508 256 54 22 chr2 9399452 9399675 -241288179 + L1ME2 LINE L1 5598 5827 -337 310 300 147 10 chr2 9399682 9400164 -241287690 + L1MEc LINE L1 1150 1720 -856 664 357 108 18 chr2 9400233 9401145 -241286709 + L2 LINE L2 2313 3313 0 183 289 0 0 chr2 9401891 9401936 -241285918 + L2 LINE L2 2260 2304 -1010 2026 156 0 6 chr2 9402233 9402547 -241285307 - AluSx SINE Alu 0 312 1 399 127 0 0 chr2 9402765 9402828 -241285026 + (TG)n Simple_repeat Simple_repeat 2 64 0 183 389 49 14 chr2 9403289 9403433 -241284421 + L2 LINE L2 3082 3230 -42 1549 180 171 3 chr2 9403915 9404231 -241283623 + MLT1A2 LTR MaLR 3 371 -3 1427 260 101 10 chr2 9404233 9404638 -241283216 + L1ME3A LINE L1 4929 5296 -866 1992 147 0 0 chr2 9404638 9404937 -241282917 + AluSx SINE Alu 1 299 -13 1427 260 101 10 chr2 9404937 9405104 -241282750 + L1ME3A LINE L1 5296 5446 -716 2892 143 20 29 chr2 9405104 9405593 -241282261 + MER66B LTR ERV1 2 486 0 1427 260 101 10 chr2 9405593 9405864 -241281990 + L1ME3A LINE L1 5446 5853 -309 1834 166 13 0 chr2 9405923 9406231 -241281623 + AluJb SINE Alu 1 312 0 515 182 42 7 chr2 9406233 9406376 -241281478 + GA-rich Low_complexity Low_complexity 3 150 0 202 74 0 0 chr2 9406386 9406413 -241281441 + (GAAAA)n Simple_repeat Simple_repeat 1 27 0 2118 128 0 3 chr2 9406427 9406733 -241281121 + AluJb SINE Alu 1 305 -7 334 241 147 9 chr2 9406737 9406853 -241281001 + L1ME3A LINE L1 5976 6107 -63 495 83 48 36 chr2 9406859 9406928 -241280926 + LTR5 LTR ERVK 1 73 -896 2124 77 4 4 chr2 9406928 9407202 -241280652 - AluSp SINE Alu -39 274 1 495 83 48 36 chr2 9407202 9407216 -241280638 + LTR5 LTR ERVK 73 85 -884 383 21 0 0 chr2 9407216 9407264 -241280590 + AluSp/q SINE Alu 218 265 -38 595 88 0 0 chr2 9407264 9407344 -241280510 - LTR5 LTR ERVK -889 80 1 523 215 67 0 chr2 9407346 9407495 -241280359 - MER97a DNA MER1_type? -221 673 515 262 268 0 24 chr2 9407661 9407743 -241280111 - MER115 DNA AcHobo -613 80 1 1683 142 49 17 chr2 9408084 9408372 -241279482 - AluJo SINE Alu -9 303 7 205 324 59 0 chr2 9408793 9408861 -241278993 + MIR SINE MIR 81 152 -110 711 248 12 6 chr2 9409024 9409185 -241278669 + MER103 DNA DNA 3 164 -2 224 59 29 0 chr2 9409189 9409223 -241278631 + (TG)n Simple_repeat Simple_repeat 1 35 0 742 74 44 15 chr2 9409240 9409375 -241278479 + GA-rich Low_complexity Low_complexity 2 140 0 494 321 77 6 chr2 9411815 9411983 -241275871 - MIR SINE MIR -48 214 35 824 243 74 42 chr2 9412074 9412411 -241275443 + MLT1A1 LTR MaLR 1 348 -17 443 258 121 0 chr2 9412436 9412560 -241275294 - MIR SINE MIR -102 160 22 2502 51 0 13 chr2 9412729 9413041 -241274813 - AluY SINE Alu -3 308 1 3251 178 22 46 chr2 9413535 9414292 -241273562 + L1MB3 LINE L1 5417 6155 -28 3993 87 20 14 chr2 9415907 9416458 -241271396 + MER41A LTR ERV1 1 554 0 1362 211 111 75 chr2 9417854 9418234 -241269620 + MLT1C LTR MaLR 1 401 -66 1890 98 62 0 chr2 9418234 9418510 -241269344 - AluSx SINE Alu -19 293 1 1362 211 111 75 chr2 9418510 9418580 -241269274 + MLT1C LTR MaLR 401 467 0 520 242 43 12 chr2 9419885 9420046 -241267808 - MLT1F LTR MaLR -7 535 370 1488 154 68 39 chr2 9420209 9420489 -241267365 + AluJo SINE Alu 2 289 -23 2334 70 13 3 chr2 9420949 9421250 -241266604 - AluY SINE Alu -7 304 1 580 293 55 6 chr2 9421718 9421882 -241265972 + MER5B DNA MER1_type 2 173 -5 1790 161 3 3 chr2 9423260 9423552 -241264302 - AluJb SINE Alu -20 292 1 435 276 69 35 chr2 9423710 9423913 -241263941 + MLT1J2 LTR MaLR 240 449 -1 251 253 63 63 chr2 9423917 9424012 -241263842 + MIR SINE MIR 162 256 -6 293 251 30 133 chr2 9424214 9424274 -241263580 - MLT1K LTR MaLR 0 588 523 2136 112 0 28 chr2 9424274 9424596 -241263258 + AluSq SINE Alu 1 313 0 293 251 30 133 chr2 9424596 9424738 -241263116 - MLT1K LTR MaLR -65 523 407 319 322 202 8 chr2 9425244 9425502 -241262352 + L3 LINE CR1 1163 1470 -107 2113 89 0 92 chr2 9425999 9426337 -241261517 + AluSc SINE Alu 3 309 0 378 280 0 0 chr2 9426381 9426513 -241261341 + (TG)n Simple_repeat Simple_repeat 1 132 0 228 257 0 0 chr2 9426516 9426629 -241261225 + (TGAG)n Simple_repeat Simple_repeat 4 116 0 389 222 20 6 chr2 9426662 9427010 -241260844 + (TG)n Simple_repeat Simple_repeat 1 353 0 285 262 30 30 chr2 9427010 9427174 -241260680 + (TGAG)n Simple_repeat Simple_repeat 3 166 0 215 326 116 0 chr2 9428382 9428511 -241259343 + MIR SINE MIR 104 247 -15 391 304 9 7 chr2 9428532 9428659 -241259195 + MIR SINE MIR 16 138 -70 180 295 95 11 chr2 9428993 9429088 -241258766 - MIR SINE MIR -63 145 43 299 313 50 0 chr2 9431641 9431740 -241256114 - MIR3 SINE MIR -42 166 63 1825 162 14 0 chr2 9431927 9432217 -241255637 - AluJb SINE Alu -18 294 1 304 293 41 41 chr2 9435160 9435283 -241252571 + MIR3 SINE MIR 64 186 -22 256 344 0 22 chr2 9435972 9436062 -241251792 + MIR SINE MIR 174 261 -1 189 242 97 0 chr2 9436793 9436855 -241250999 - MIR SINE MIR -87 121 54 394 335 147 12 chr2 9436939 9437382 -241250472 + L2 LINE L2 2551 3053 -260 1870 261 60 7 chr2 9437492 9438027 -241249827 - L1MD1 LINE L1 -86 6262 5709 1280 344 203 19 chr2 9438028 9439538 -241248316 - L2 LINE L2 -605 2709 922 1407 164 23 34 chr2 9439550 9439813 -241248041 + AluJb SINE Alu 15 274 -38 306 263 20 10 chr2 9439838 9439937 -241247917 + L1MEd LINE L1 46 145 -5974 830 296 47 58 chr2 9440157 9440818 -241247036 + L1MEd LINE L1 602 1255 -4864 29 60 0 0 chr2 9440882 9440932 -241246922 + AT_rich Low_complexity Low_complexity 1 50 0 564 42 0 0 chr2 9440940 9441011 -241246843 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 502 256 31 6 chr2 9441162 9441322 -241246532 + L1ME LINE L1 5389 5552 -610 6656 216 31 29 chr2 9441339 9441472 -241246382 - L1MD1 LINE L1 -769 5377 5246 2108 111 3 7 chr2 9441472 9441770 -241246084 + AluSg SINE Alu 14 310 0 6656 216 31 29 chr2 9441770 9443592 -241244262 - L1MD1 LINE L1 -900 5246 3419 352 336 0 0 chr2 9443611 9443742 -241244112 - L2 LINE L2 -2382 932 802 247 390 138 8 chr2 9443751 9444005 -241243849 + L2 LINE L2 2978 3264 -8 551 225 61 56 chr2 9444022 9444235 -241243619 - HAL1 LINE L1 -695 1812 1599 416 326 14 35 chr2 9444241 9444385 -241243469 - HAL1 LINE L1 -977 1530 1390 238 146 0 83 chr2 9444397 9444445 -241243409 - MER5A DNA MER1_type 0 189 146 230 98 0 49 chr2 9444448 9444489 -241243365 - MER5A DNA MER1_type -150 39 1 367 293 65 78 chr2 9444514 9444808 -241243046 - L1MC5 LINE L1 -199 7762 7473 1581 193 16 16 chr2 9444808 9445148 -241242706 - AluJo SINE Alu 0 342 3 797 254 119 28 chr2 9445159 9445596 -241242258 - HAL1 LINE L1 -1253 1254 778 191 146 24 0 chr2 9445596 9445637 -241242217 + (TG)n Simple_repeat Simple_repeat 1 42 0 231 250 36 88 chr2 9445640 9445832 -241242022 - HAL1 LINE L1 -1723 784 603 347 269 82 106 chr2 9445880 9446136 -241241718 - HAL1 LINE L1 -1987 520 271 2309 93 3 3 chr2 9446220 9446533 -241241321 - AluSq SINE Alu 0 313 1 332 225 0 0 chr2 9447766 9447837 -241240017 - MER53 DNA DNA -2 187 117 306 209 77 0 chr2 9447777 9447868 -241239986 + MER53 DNA DNA 24 121 -68 * 342 279 42 21 chr2 9448503 9448657 -241239197 - MIR SINE MIR -63 145 3 261 57 0 0 chr2 9450586 9450621 -241237233 + (CA)n Simple_repeat Simple_repeat 1 35 0 199 195 0 0 chr2 9451976 9452017 -241235837 - L2 LINE L2 0 3313 3273 242 305 34 68 chr2 9452035 9452153 -241235701 + MER81 DNA DNA 1 114 0 2309 105 0 0 chr2 9452256 9452562 -241235292 - AluSx SINE Alu -6 306 1 338 322 57 48 chr2 9453017 9453244 -241234610 - MIR SINE MIR -3 259 31 1451 113 0 0 chr2 9453919 9454123 -241233731 + AluSg/x SINE Alu 107 310 0 2439 149 29 0 chr2 9454415 9454824 -241233030 - MSTC LTR MaLR 0 428 8 2045 142 7 0 chr2 9454918 9455221 -241232633 - AluSx SINE Alu -7 305 1 853 295 101 47 chr2 9455555 9455982 -241231872 - MLT1J2 LTR MaLR 0 450 1 241 319 43 0 chr2 9456222 9456316 -241231538 - L2 LINE L2 -528 2786 2689 3957 45 0 14 chr2 9456782 9457269 -241230585 + L1PA5 LINE L1 5675 6154 0 1400 245 69 39 chr2 9458049 9458539 -241229315 - MLT1D LTR MaLR 0 505 1 187 284 45 0 chr2 9459131 9459198 -241228656 + MIR SINE MIR 78 147 -61 691 185 8 31 chr2 9459652 9459782 -241228072 + AluJo/FLAM SINE Alu 2 128 -174 1531 135 64 70 chr2 9459784 9460096 -241227758 + AluJb SINE Alu 3 312 0 1958 194 62 36 chr2 9461782 9462169 -241225685 + Charlie1b DNA MER1_type 1 405 -2356 2069 138 0 3 chr2 9462169 9462481 -241225373 - AluSq SINE Alu -1 312 2 1958 194 62 36 chr2 9462481 9462597 -241225257 + Charlie1b DNA MER1_type 405 517 -6 392 305 24 42 chr2 9462674 9462841 -241225013 + MIR SINE MIR 29 192 -70 361 258 32 0 chr2 9463415 9463508 -241224346 + MIR3 SINE MIR 61 156 -52 1807 160 7 3 chr2 9464375 9464669 -241223185 + AluJb SINE Alu 1 295 -17 218 267 11 0 chr2 9464755 9464845 -241223009 + (CA)n Simple_repeat Simple_repeat 2 92 0 528 254 0 0 chr2 9464865 9465042 -241222812 + (CA)n Simple_repeat Simple_repeat 1 177 0 1652 202 67 0 chr2 9465610 9465973 -241221881 + MLT1B LTR MaLR 1 466 -1 184 208 42 21 chr2 9466100 9466148 -241221706 + L2 LINE L2 3223 3271 -1 2190 104 0 0 chr2 9466149 9466446 -241221408 - AluSx SINE Alu -13 299 3 1346 268 107 16 chr2 9466880 9467377 -241220477 + MLT1F LTR MaLR 1 542 0 1645 159 10 7 chr2 9467447 9467736 -241220118 - AluJb SINE Alu -16 296 7 2029 67 50 18 chr2 9467944 9468227 -241219627 + AluY SINE Alu 1 292 -19 3849 108 45 69 chr2 9468445 9468979 -241218875 - MER41B LTR ERV1 0 635 118 2188 80 7 0 chr2 9468979 9469268 -241218586 + AluSc SINE Alu 19 309 0 3849 108 45 69 chr2 9469268 9469384 -241218470 - MER41B LTR ERV1 -517 118 1 209 229 83 0 chr2 9470001 9470049 -241217805 - L2 LINE L2 -1 3271 3220 254 373 49 35 chr2 9470538 9470822 -241217032 - L2 LINE L2 -736 2578 2291 233 330 33 0 chr2 9471768 9471859 -241215995 - MLT1J LTR MaLR -92 419 326 334 252 163 0 chr2 9471862 9471985 -241215869 - MLT1J2 LTR MaLR -307 143 1 207 404 60 6 chr2 9472188 9472354 -241215500 - L2 LINE L2 -1855 1459 1285 321 318 79 39 chr2 9472446 9472726 -241215128 - L2 LINE L2 -2361 953 663 589 266 87 0 chr2 9473012 9473196 -241214658 + MIR SINE MIR 14 213 -49 206 83 56 0 chr2 9473584 9473620 -241214234 + T-rich Low_complexity Low_complexity 2 39 0 2223 114 0 0 chr2 9473635 9473933 -241213921 + AluSx SINE Alu 1 298 -14 1901 127 3 24 chr2 9473933 9474224 -241213630 - AluSx SINE Alu -27 285 1 455 48 16 0 chr2 9474230 9474292 -241213562 + (TTTTC)n Simple_repeat Simple_repeat 3 65 0 861 211 6 34 chr2 9474304 9474479 -241213375 - AluJo SINE Alu -141 171 2 225 0 0 0 chr2 9474493 9474518 -241213336 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1777 113 0 4 chr2 9474518 9474765 -241213089 - AluSx SINE Alu -66 246 1 1559 160 82 17 chr2 9477027 9477320 -241210534 + AluJo SINE Alu 1 312 0 182 323 48 0 chr2 9478334 9478396 -241209458 - MIR SINE MIR -63 145 81 205 296 31 41 chr2 9478626 9478753 -241209101 - MIR3 SINE MIR -52 156 68 315 267 75 25 chr2 9480599 9480719 -241207135 - L2 LINE L2 -1 3312 3187 736 220 23 0 chr2 9480825 9480998 -241206856 + MER96B DNA MER1_type? 1 177 -240 1581 161 68 0 chr2 9481397 9481677 -241206177 - AluJb SINE Alu -13 299 1 906 169 9 87 chr2 9481687 9481918 -241205936 - L1MB8 LINE L1 -3 6175 5963 914 270 88 47 chr2 9482141 9482504 -241205350 + MLT1J LTR MaLR 33 410 -101 657 266 8 55 chr2 9482535 9482772 -241205082 - L1ME1 LINE L1 -5 6161 5936 250 290 21 11 chr2 9482777 9482870 -241204984 + MLT1J LTR MaLR 414 507 -4 340 295 90 7 chr2 9482966 9483278 -241204576 - LTR16A LTR ERVL -12 438 45 22 35 0 0 chr2 9484170 9484199 -241203655 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 9484257 9484280 -241203574 + AT_rich Low_complexity Low_complexity 1 23 0 394 242 10 39 chr2 9484446 9484549 -241203305 - L1MC4 LINE L1 -1339 6983 1995 387 284 23 0 chr2 9484500 9484588 -241203266 + L1MC4 LINE L1 6614 6703 -1339 * 310 357 0 0 chr2 9484551 9484635 -241203219 - L1MC4 LINE L1 -1342 6700 6617 * 369 318 0 0 chr2 9484601 9484689 -241203165 + L1MC4 LINE L1 6615 6702 -1340 360 322 0 0 chr2 9484637 9484724 -241203130 - L1MC4 LINE L1 -1342 6700 6614 * 266 230 23 0 chr2 9484756 9484843 -241203011 + L1MC4 LINE L1 6614 6702 -1340 306 194 0 0 chr2 9484843 9484905 -241202949 + (CA)n Simple_repeat Simple_repeat 1 62 0 1888 139 7 0 chr2 9484915 9485203 -241202651 - AluSq SINE Alu -23 290 1 669 297 107 30 chr2 9485233 9485800 -241202054 - L1ME3A LINE L1 -247 5923 5308 1509 186 4 0 chr2 9485874 9486137 -241201717 + AluJo SINE Alu 37 300 -12 3900 179 27 27 chr2 9486284 9487469 -241200385 - L1MB7 LINE L1 -54 6130 4928 716 165 0 0 chr2 9487472 9487581 -241200273 + AluSp/q SINE Alu 190 298 -15 995 176 5 10 chr2 9487592 9487785 -241200069 - L1MB7 LINE L1 -1215 4931 4740 1018 157 35 0 chr2 9487852 9488024 -241199830 + MER5A DNA MER1_type 1 178 -11 993 156 85 5 chr2 9488044 9488255 -241199599 + MER33 DNA MER1_type 2 229 -95 3033 136 2 6 chr2 9488730 9489208 -241198646 - MER41B LTR ERV1 0 635 160 1261 91 6 0 chr2 9489370 9489546 -241198308 - MER41B LTR ERV1 -458 177 1 1897 121 0 11 chr2 9490047 9490327 -241197527 - AluJb SINE Alu -17 295 19 240 35 0 0 chr2 9490331 9490360 -241197494 + (T)n Simple_repeat Simple_repeat 1 29 0 180 300 60 30 chr2 9490372 9490472 -241197382 - MIR SINE MIR -64 198 96 1247 211 67 58 chr2 9490777 9491123 -241196731 - MLT1A2 LTR MaLR 0 374 26 208 351 75 11 chr2 9491813 9491907 -241195947 + MIR SINE MIR 47 146 -62 2851 184 13 0 chr2 9491963 9492518 -241195336 + L1MB3 LINE L1 4596 5157 -989 2037 98 0 0 chr2 9492545 9492872 -241194982 + AluSx SINE Alu 6 332 0 2408 149 16 24 chr2 9492872 9493325 -241194529 + L1MB3 LINE L1 5495 6172 -11 919 144 17 22 chr2 9493325 9493497 -241194357 + L1MB3 LINE L1 6005 6183 0 2408 149 16 24 chr2 9493497 9493509 -241194345 + L1MB3 LINE L1 6172 6183 0 1826 194 121 16 chr2 9493599 9494022 -241193832 + MLT1C LTR MaLR 1 467 0 501 291 22 6 chr2 9494576 9494758 -241193096 + MLT1J2 LTR MaLR 1 185 -265 26 64 0 0 chr2 9495711 9495758 -241192096 + GC_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr2 9495958 9495987 -241191867 + GC_rich Low_complexity Low_complexity 1 29 0 245 197 0 42 chr2 9495999 9496070 -241191784 + C-rich Low_complexity Low_complexity 6 73 0 23 0 0 0 chr2 9496094 9496117 -241191737 + GC_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr2 9496278 9496321 -241191533 + GC_rich Low_complexity Low_complexity 1 43 0 198 304 14 0 chr2 9496981 9497050 -241190804 + MIR SINE MIR 77 146 -62 22 0 0 0 chr2 9498410 9498432 -241189422 + AT_rich Low_complexity Low_complexity 1 22 0 633 259 68 18 chr2 9501454 9501674 -241186180 - L1MB7 LINE L1 -18 6166 5936 231 61 0 0 chr2 9502066 9502099 -241185755 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 577 219 42 8 chr2 9502111 9502230 -241185624 + FLAM_A SINE Alu 1 123 -10 1860 164 3 0 chr2 9502231 9502518 -241185336 - AluJo SINE Alu -19 293 6 195 267 65 40 chr2 9502528 9502647 -241185207 - MIR SINE MIR -67 141 23 811 188 2 14 chr2 9504945 9505468 -241182386 + (CAT)n Simple_repeat Simple_repeat 1 516 0 873 148 11 6 chr2 9505488 9505664 -241182190 + (CAT)n Simple_repeat Simple_repeat 1 177 0 835 169 0 22 chr2 9505640 9505824 -241182030 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 * 815 202 0 7 chr2 9505809 9506120 -241181734 + (CAT)n Simple_repeat Simple_repeat 1 308 0 * 263 258 56 45 chr2 9506846 9506935 -241180919 + MIR3 SINE MIR 103 192 -16 2389 88 0 10 chr2 9507040 9507345 -241180509 + AluSg SINE Alu 1 302 -8 2616 40 0 7 chr2 9508199 9508499 -241179355 + AluY SINE Alu 1 298 -13 398 255 103 14 chr2 9508547 9508692 -241179162 + L1ME4a LINE L1 5964 6121 0 2201 108 0 0 chr2 9508920 9509208 -241178646 + AluSx SINE Alu 7 294 -18 2177 137 0 0 chr2 9510607 9510907 -241176947 - AluSx SINE Alu -12 300 1 281 315 36 36 chr2 9510907 9511008 -241176846 - L2 LINE L2 -15 3298 3195 279 0 0 0 chr2 9512760 9512791 -241175063 + (GGGTG)n Simple_repeat Simple_repeat 4 34 0 264 59 0 0 chr2 9512921 9512955 -241174899 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 2167 101 156 6 chr2 9513442 9513807 -241174047 + MSTA LTR MaLR 2 421 -7 264 59 0 0 chr2 9513926 9513960 -241173894 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 249 291 95 76 chr2 9513963 9514173 -241173681 - L2 LINE L2 -27 3286 3073 2605 122 26 0 chr2 9514175 9514592 -241173262 - MSTA LTR MaLR 0 428 1 2420 172 13 37 chr2 9514642 9515183 -241172671 - L1MB7 LINE L1 -14 6170 5643 1707 208 0 0 chr2 9515200 9515512 -241172342 - AluJo SINE Alu 0 312 1 438 261 45 15 chr2 9515513 9515647 -241172207 - L2 LINE L2 -241 3072 2935 665 264 159 85 chr2 9515747 9516100 -241171754 + MLT1J LTR MaLR 234 508 -3 430 230 8 71 chr2 9516912 9517038 -241170816 - L2 LINE L2 0 3313 3196 223 264 72 56 chr2 9517567 9517692 -241170162 + MIR SINE MIR 32 158 -104 2382 90 3 34 chr2 9518000 9518322 -241169532 - AluSx SINE Alu 0 312 1 480 119 0 151 chr2 9518341 9518467 -241169387 - FRAM SINE Alu -18 158 52 223 311 151 8 chr2 9518528 9518647 -241169207 - MIR SINE MIR -66 196 61 385 311 78 36 chr2 9520596 9520789 -241167065 + MIR SINE MIR 50 250 -12 442 263 8 17 chr2 9521376 9521494 -241166360 - MIR SINE MIR -63 145 29 211 208 75 0 chr2 9521484 9521537 -241166317 + L2 LINE L2 3206 3262 -10 * 1694 181 36 5 chr2 9521541 9521993 -241165861 + MLT2B2 LTR ERVL 1 519 -1 30 0 0 0 chr2 9522161 9522191 -241165663 + AT_rich Low_complexity Low_complexity 1 30 0 732 140 9 0 chr2 9522196 9522310 -241165544 - FLAM_C SINE Alu -20 123 9 1280 246 82 19 chr2 9522392 9522855 -241164999 + MLT1D LTR MaLR 1 492 -13 1519 196 48 16 chr2 9523602 9523975 -241163879 - MLT1B LTR MaLR 0 390 6 890 253 145 15 chr2 9525759 9526159 -241161695 - MER31B LTR ERV1 -5 461 10 1526 194 16 44 chr2 9527393 9527500 -241160354 + AluJo SINE Alu 3 111 -201 189 0 0 0 chr2 9527500 9527521 -241160333 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1526 194 16 44 chr2 9527521 9527732 -241160122 + AluJo SINE Alu 111 312 0 353 224 94 151 chr2 9527737 9527885 -241159969 - L1ME2 LINE L1 -240 5924 5794 1958 134 29 0 chr2 9527885 9528162 -241159692 - AluJb SINE Alu -22 290 6 353 224 94 151 chr2 9528162 9528258 -241159596 - L1ME2 LINE L1 -370 5794 5694 1412 194 168 60 chr2 9528274 9528789 -241159065 + MLT1F1 LTR MaLR 1 566 -1 535 297 34 32 chr2 9528822 9529142 -241158712 - L1ME2 LINE L1 -517 5645 5326 248 263 15 36 chr2 9529399 9529536 -241158318 - L1ME2 LINE L1 -770 5376 5243 385 307 199 0 chr2 9529539 9529705 -241158149 - L1ME4a LINE L1 -218 5903 5705 969 257 34 81 chr2 9529705 9529928 -241157926 - MLT1I LTR MaLR 0 409 210 1777 176 0 26 chr2 9529928 9530241 -241157613 - AluJo SINE Alu -6 306 2 969 257 34 81 chr2 9530241 9530402 -241157452 - MLT1I LTR MaLR -199 210 43 281 281 61 53 chr2 9530728 9530842 -241157012 - MIR SINE MIR -71 191 77 1077 203 17 17 chr2 9531271 9531508 -241156346 + L1MB7 LINE L1 5894 6130 -54 348 294 59 10 chr2 9531587 9531689 -241156165 + MIR SINE MIR 75 181 -81 377 263 0 10 chr2 9532072 9532171 -241155683 - MIR SINE MIR 0 262 165 236 219 16 16 chr2 9532282 9532346 -241155508 + L1MC5 LINE L1 7844 7907 -54 1195 115 0 0 chr2 9532352 9532509 -241155345 - AluSg/x SINE Alu -22 290 134 1580 103 58 137 chr2 9532509 9532838 -241155016 - AluYb8 SINE Alu -15 303 1 346 178 28 9 chr2 9532873 9532951 -241154903 - MIR SINE MIR -84 178 100 263 316 41 10 chr2 9533380 9533478 -241154376 + MIR SINE MIR 66 166 -96 266 294 64 9 chr2 9533755 9533864 -241153990 - MIR SINE MIR -130 132 18 1838 144 36 4 chr2 9534387 9534664 -241153190 + AluJb SINE Alu 21 306 -6 1410 172 24 58 chr2 9535065 9535381 -241152473 + AluJo SINE Alu 1 306 0 239 244 51 0 chr2 9535771 9535849 -241152005 - L2 LINE L2 -329 2984 2903 404 169 12 36 chr2 9537882 9538048 -241149806 + (TCTCTG)n Simple_repeat Simple_repeat 6 167 0 420 228 0 0 chr2 9538087 9538258 -241149596 + CT-rich Low_complexity Low_complexity 2 172 0 390 162 34 34 chr2 9538231 9538410 -241149444 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 * 404 239 115 8 chr2 9538486 9538616 -241149238 + MIR SINE MIR 62 205 -57 2026 146 14 0 chr2 9538654 9538942 -241148912 - AluJo SINE Alu -16 296 5 337 185 115 62 chr2 9538977 9539107 -241148747 - L1ME4a LINE L1 -3 6118 5982 209 129 0 48 chr2 9539188 9539250 -241148604 + (TG)n Simple_repeat Simple_repeat 1 59 0 2377 104 3 0 chr2 9541359 9541666 -241146188 + AluSx SINE Alu 3 310 -2 1853 166 0 48 chr2 9541671 9541984 -241145870 + AluJo SINE Alu 1 298 -14 2617 59 13 0 chr2 9542616 9542922 -241144932 + AluY SINE Alu 2 311 0 1864 132 75 4 chr2 9543509 9543789 -241144065 - AluJo SINE Alu -12 300 1 4035 155 46 9 chr2 9543789 9544665 -241143189 + L1MB8 LINE L1 5152 6058 -120 2002 162 0 3 chr2 9544665 9544974 -241142880 + AluJo SINE Alu 1 308 -4 2114 113 14 0 chr2 9545086 9545369 -241142485 - AluSx SINE Alu -2 310 24 274 333 0 11 chr2 9546295 9546382 -241141472 + MIR SINE MIR 60 145 -63 1895 135 26 26 chr2 9546747 9547051 -241140803 - AluJb SINE Alu -8 304 1 327 179 51 26 chr2 9547053 9547131 -241140723 + MER58 DNA MER1_type 174 253 -2167 303 255 103 49 chr2 9547245 9547449 -241140405 - L3 LINE CR1 -102 1475 1261 208 398 92 4 chr2 9548102 9548353 -241139501 - L2 LINE L2 -8 3264 2992 2950 6 0 0 chr2 9548359 9548670 -241139184 + AluYa5 SINE Alu 1 311 0 287 268 89 73 chr2 9549285 9549408 -241138446 - MIR SINE MIR -65 197 73 268 295 181 7 chr2 9549670 9549819 -241138035 - MIR SINE MIR -59 203 29 1450 132 5 0 chr2 9550107 9550312 -241137542 + AluJo SINE Alu 87 292 -20 288 235 4 12 chr2 9551450 9551532 -241136322 - FLAM SINE Alu -5 128 74 3132 142 55 110 chr2 9551536 9552366 -241135488 + LTR1 LTR ERV1 1 785 0 1993 111 31 14 chr2 9553607 9553896 -241133958 - AluSx SINE Alu -18 294 1 198 0 0 0 chr2 9554450 9554472 -241133382 + (GA)n Simple_repeat Simple_repeat 2 23 0 1973 151 31 0 chr2 9554906 9555197 -241132657 - AluSq SINE Alu -13 300 1 603 185 51 36 chr2 9555200 9555384 -241132470 - MIR SINE MIR -65 197 10 234 254 0 0 chr2 9556096 9556151 -241131703 - MIR SINE MIR -76 132 78 950 203 0 0 chr2 9556174 9556332 -241131522 + AluJb SINE Alu 147 304 -8 516 252 27 27 chr2 9556779 9556926 -241130928 + MER5A DNA MER1_type 38 184 -5 277 293 75 9 chr2 9556937 9557043 -241130811 + MIR SINE MIR 35 147 -115 1975 141 3 3 chr2 9557776 9558074 -241129780 - AluJb SINE Alu -14 298 1 2258 89 3 6 chr2 9559412 9559725 -241128129 - AluSx SINE Alu 0 312 1 1371 143 48 0 chr2 9560468 9560704 -241127150 - AluJo SINE Alu 0 310 65 330 268 0 0 chr2 9561070 9561193 -241126661 + (TG)n Simple_repeat Simple_repeat 2 124 0 526 268 6 3 chr2 9561266 9561580 -241126274 + (TG)n Simple_repeat Simple_repeat 1 315 0 273 290 187 0 chr2 9563993 9564100 -241123754 + MIR3 SINE MIR 33 159 -49 368 360 39 22 chr2 9565544 9565722 -241122132 - L2 LINE L2 -18 3254 3074 321 304 98 79 chr2 9568256 9568470 -241119384 - L1ME4a LINE L1 -30 6091 5874 558 335 66 12 chr2 9568748 9568990 -241118864 + MIR SINE MIR 2 256 -6 2169 145 124 0 chr2 9569083 9569462 -241118392 + MSTB LTR MaLR 1 426 0 364 188 124 0 chr2 9569507 9569624 -241118230 + L1ME1 LINE L1 6053 6184 0 2055 126 14 3 chr2 9569633 9569926 -241117928 - AluSx SINE Alu -16 296 1 309 249 29 58 chr2 9570026 9570244 -241117610 + (TATTG)n Simple_repeat Simple_repeat 1 211 0 225 0 0 0 chr2 9571413 9571438 -241116416 + (T)n Simple_repeat Simple_repeat 1 25 0 1007 275 41 9 chr2 9571581 9571923 -241115931 - MLT1A2 LTR MaLR -17 357 5 278 261 169 32 chr2 9571984 9572233 -241115621 - L1ME4a LINE L1 -8 6113 5831 1015 96 0 7 chr2 9572235 9572371 -241115483 + AluSq/x SINE Alu 1 135 -178 297 369 167 30 chr2 9572684 9573020 -241114834 + L3 LINE CR1 493 874 -703 688 288 73 67 chr2 9573818 9574134 -241113720 + L2 LINE L2 2954 3271 -1 4939 152 63 30 chr2 9574894 9575788 -241112066 + L1MC1 LINE L1 5411 6333 0 1806 142 4 0 chr2 9576280 9576555 -241111299 + AluJo SINE Alu 1 276 -36 2030 126 0 0 chr2 9576562 9576848 -241111006 - AluSx SINE Alu -22 290 5 210 71 0 0 chr2 9576867 9576895 -241110959 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1009 164 36 76 chr2 9576935 9577160 -241110694 - MER20 DNA MER1_type -2 217 2 219 36 0 0 chr2 9577206 9577234 -241110620 + (CA)n Simple_repeat Simple_repeat 2 29 0 278 290 238 28 chr2 9577661 9577947 -241109907 - L2 LINE L2 -30 3242 2897 2084 80 76 0 chr2 9578029 9578304 -241109550 + AluSc SINE Alu 1 296 -13 186 271 212 42 chr2 9578506 9578624 -241109230 + MER5A DNA MER1_type 17 154 -35 246 289 106 0 chr2 9580958 9581062 -241106792 + MIR3 SINE MIR 47 161 -47 204 40 0 0 chr2 9581066 9581091 -241106763 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 1001 220 119 42 chr2 9582010 9582189 -241105665 + MLT1A2 LTR MaLR 1 165 -209 3231 150 10 2 chr2 9582189 9582668 -241105186 + MER66B LTR ERV1 1 483 -3 1001 220 119 42 chr2 9582668 9582824 -241105030 + MLT1A2 LTR MaLR 165 362 -12 744 298 59 12 chr2 9582829 9583168 -241104686 - L1ME3A LINE L1 -258 5912 5558 1071 186 70 64 chr2 9584613 9584941 -241102913 - L1MB7 LINE L1 0 6184 5855 2091 98 0 7 chr2 9584951 9585237 -241102617 - AluSg1 SINE Alu -25 284 1 1730 168 7 0 chr2 9585238 9585530 -241102324 - AluJo SINE Alu -18 294 1 494 238 79 0 chr2 9585530 9585694 -241102160 - L1M4 LINE L1 -2561 3585 3409 798 258 58 48 chr2 9585732 9585997 -241101857 - MIR SINE MIR 0 262 1 246 269 156 50 chr2 9586586 9586727 -241101127 - MIR3 SINE MIR -19 189 34 1749 189 0 0 chr2 9587024 9587331 -241100523 + AluJo SINE Alu 3 309 -3 1035 234 58 23 chr2 9587691 9587981 -241099873 + L1MC1 LINE L1 6013 6316 -17 1840 171 7 3 chr2 9587981 9588286 -241099568 - AluJb SINE Alu -6 306 1 1035 234 58 23 chr2 9588286 9588303 -241099551 + L1MC1 LINE L1 6316 6331 -2 414 0 0 0 chr2 9588303 9588349 -241099505 + (CA)n Simple_repeat Simple_repeat 2 47 0 322 193 174 28 chr2 9588545 9588654 -241099200 - L2 LINE L2 -3 3269 3145 562 266 23 60 chr2 9588872 9589090 -241098764 + MIR SINE MIR 21 226 -36 1431 84 0 0 chr2 9592398 9592796 -241095058 + (CCA)n Simple_repeat Simple_repeat 1 398 0 458 327 199 6 chr2 9593053 9593414 -241094440 - L2 LINE L2 -20 3293 2863 306 148 0 0 chr2 9593933 9593987 -241093867 + (CA)n Simple_repeat Simple_repeat 1 54 0 215 234 0 0 chr2 9594834 9594881 -241092973 - L2 LINE L2 -10 3262 3216 2294 81 10 0 chr2 9595081 9595389 -241092465 - AluSx SINE Alu -1 311 1 244 369 117 0 chr2 9595434 9595545 -241092309 + L2 LINE L2 3139 3262 -10 26 30 0 0 chr2 9596430 9596463 -241091391 + AT_rich Low_complexity Low_complexity 1 33 0 193 340 19 19 chr2 9596483 9596589 -241091265 - MIR3 SINE MIR -21 187 82 450 0 0 0 chr2 9596644 9596694 -241091160 + (TG)n Simple_repeat Simple_repeat 1 50 0 2043 108 4 0 chr2 9596694 9596972 -241090882 - AluSx SINE Alu -33 279 1 382 263 78 62 chr2 9598234 9598413 -241089441 - MIR SINE MIR -56 206 25 237 191 0 48 chr2 9600578 9600641 -241087213 - L2 LINE L2 -12 3260 3201 568 284 214 23 chr2 9600645 9600987 -241086867 - L2 LINE L2 -3 3310 2904 262 360 80 28 chr2 9601013 9601263 -241086591 - L2 LINE L2 -96 3176 2914 1236 199 40 46 chr2 9602081 9602407 -241085447 - MER33 DNA MER1_type 0 324 1 2085 115 10 10 chr2 9602967 9603279 -241084575 - AluSx SINE Alu 0 312 1 279 190 0 0 chr2 9603593 9603651 -241084203 + T-rich Low_complexity Low_complexity 1 58 0 389 310 155 34 chr2 9604954 9605193 -241082661 - HAL1 LINE L1 -1837 670 403 799 288 35 63 chr2 9605215 9605390 -241082464 - MLT1J2 LTR MaLR -2 448 270 764 262 15 34 chr2 9605390 9605596 -241082258 + MER105 DNA DNA 1 202 -2 799 288 35 63 chr2 9605596 9605847 -241082007 - MLT1J2 LTR MaLR -180 270 34 186 276 40 40 chr2 9605886 9605962 -241081892 + L2 LINE L2 204 279 -3035 198 262 0 0 chr2 9607218 9607260 -241080594 + MIR SINE MIR 35 76 -186 1785 163 15 66 chr2 9607474 9607867 -241079987 - MLT1B LTR MaLR -17 373 1 329 150 175 0 chr2 9609377 9609457 -241078397 - MLT1C LTR MaLR -369 98 5 567 140 20 20 chr2 9609715 9609815 -241078039 + FLAM_C SINE Alu 34 133 -10 2275 106 0 0 chr2 9610270 9610573 -241077281 + AluSq SINE Alu 1 303 -10 262 296 28 0 chr2 9610674 9610782 -241077072 - L1MC4a LINE L1 -1869 5939 5829 314 290 76 0 chr2 9610796 9610927 -241076927 - L1MC4a LINE L1 -2084 5724 5584 1616 186 21 0 chr2 9610961 9611246 -241076608 + AluJo SINE Alu 13 303 -9 1784 131 42 48 chr2 9611324 9611448 -241076406 + AluSx SINE Alu 1 124 -188 228 35 0 0 chr2 9611448 9611477 -241076377 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1784 131 42 48 chr2 9611477 9611664 -241076190 + AluSx SINE Alu 124 310 -2 2237 112 0 3 chr2 9612117 9612431 -241075423 + AluSq SINE Alu 1 313 0 1419 171 91 25 chr2 9613399 9613685 -241074169 - AluSq SINE Alu -8 305 1 245 328 172 0 chr2 9613804 9613938 -241073916 - MIR SINE MIR -2 260 104 2033 129 10 0 chr2 9613953 9614247 -241073607 - AluSx SINE Alu -15 297 1 1881 161 3 0 chr2 9614621 9614920 -241072934 + AluJo SINE Alu 13 312 0 384 329 97 35 chr2 9615773 9616001 -241071853 - L1ME3 LINE L1 -1 6161 5920 241 298 53 10 chr2 9616439 9616558 -241071296 + MIR SINE MIR 38 159 -66 2474 53 0 3 chr2 9617000 9617300 -241070554 + AluY SINE Alu 1 299 -12 199 267 218 10 chr2 9617600 9617701 -241070153 + MIR SINE MIR 141 262 0 236 341 34 0 chr2 9618765 9618853 -241069001 - MIR SINE MIR -78 184 94 753 186 0 0 chr2 9621318 9621447 -241066407 - FLAM_A SINE Alu 0 133 5 232 214 36 0 chr2 9622357 9622413 -241065441 - MLT2A2 LTR ERVL -3 450 393 801 196 0 0 chr2 9622414 9622681 -241065173 + (TGGA)n Simple_repeat Simple_repeat 1 267 0 975 147 0 0 chr2 9622700 9622877 -241064977 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 825 176 0 0 chr2 9622893 9623069 -241064785 + (TGGA)n Simple_repeat Simple_repeat 4 179 0 1053 206 142 55 chr2 9623077 9623513 -241064341 - MLT2B1 LTR ERVL -46 474 1 2284 89 13 0 chr2 9623812 9624114 -241063740 + AluY SINE Alu 1 306 -5 186 185 222 0 chr2 9624232 9624286 -241063568 - L3 LINE CR1 -408 1169 1104 287 309 37 0 chr2 9624612 9624693 -241063161 - L3 LINE CR1 -533 1044 961 511 299 86 8 chr2 9624731 9624969 -241062885 - MIR SINE MIR 0 262 15 187 93 47 0 chr2 9626359 9626402 -241061452 + (TG)n Simple_repeat Simple_repeat 1 45 0 310 162 54 24 chr2 9626421 9626721 -241061133 + (TG)n Simple_repeat Simple_repeat 1 309 0 330 118 45 56 chr2 9626755 9626933 -241060921 + (TG)n Simple_repeat Simple_repeat 1 176 0 200 220 50 10 chr2 9627607 9627707 -241060147 + (TG)n Simple_repeat Simple_repeat 1 104 0 293 245 11 43 chr2 9628512 9628606 -241059248 + MER53 DNA DNA 4 94 -95 * 419 248 38 0 chr2 9628526 9628631 -241059223 - MER53 DNA DNA -4 185 77 322 233 103 9 chr2 9629428 9629544 -241058310 + MIR3 SINE MIR 15 141 -67 236 337 45 28 chr2 9630651 9630829 -241057025 - L1MC4a LINE L1 -1838 5970 5790 353 258 212 23 chr2 9630891 9631151 -241056703 - L1MC4a LINE L1 -2140 5668 5324 1991 126 14 7 chr2 9631151 9631444 -241056410 + AluSx SINE Alu 1 295 -17 353 258 212 23 chr2 9631444 9631532 -241056322 - L1MC4a LINE L1 -2484 5324 5254 212 275 18 83 chr2 9631681 9631790 -241056064 + MER5A DNA MER1_type 70 171 -18 235 288 88 0 chr2 9631707 9631787 -241056067 - MER5B DNA MER1_type -70 108 22 1731 167 31 0 chr2 9634149 9634436 -241053418 - AluJb SINE Alu -16 296 1 2023 108 7 7 chr2 9635900 9636188 -241051666 - AluJb SINE Alu -12 300 13 2083 98 0 0 chr2 9638827 9639101 -241048753 - AluSx SINE Alu -15 297 24 2283 75 3 23 chr2 9639321 9639628 -241048226 - AluSp SINE Alu -12 301 1 21 82 0 0 chr2 9640169 9640218 -241047636 + AT_rich Low_complexity Low_complexity 1 49 0 27 49 0 0 chr2 9641229 9641270 -241046584 + GC_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 9641389 9641410 -241046444 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 9641473 9641500 -241046354 + GC_rich Low_complexity Low_complexity 1 27 0 26 93 0 0 chr2 9641613 9641688 -241046166 + GC_rich Low_complexity Low_complexity 1 75 0 278 128 26 26 chr2 9641744 9641822 -241046032 + (CCCCG)n Simple_repeat Simple_repeat 4 81 0 22 0 0 0 chr2 9641871 9641893 -241045961 + GC_rich Low_complexity Low_complexity 1 22 0 366 244 12 0 chr2 9642769 9642851 -241045003 + MIR SINE MIR 42 124 -84 189 121 0 0 chr2 9642962 9642995 -241044859 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2170 116 13 0 chr2 9644024 9644325 -241043529 - AluSx SINE Alu -7 305 1 357 328 37 8 chr2 9644480 9644614 -241043240 + MIR3 SINE MIR 65 202 -6 186 43 0 0 chr2 9644770 9644793 -241043061 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2021 112 0 0 chr2 9644801 9645077 -241042777 - AluSx SINE Alu -36 276 1 663 322 25 12 chr2 9645381 9645704 -241042150 + MARNA DNA Mariner 231 557 -29 2115 116 0 13 chr2 9645883 9646186 -241041668 - AluSx SINE Alu -13 299 1 258 262 68 19 chr2 9647412 9647515 -241040339 - L2 LINE L2 -25 3247 3140 183 100 0 0 chr2 9648161 9648191 -241039663 + (GGGAGA)n Simple_repeat Simple_repeat 3 32 0 427 301 75 0 chr2 9648481 9648667 -241039187 - MLT1L LTR MaLR -52 563 364 576 182 115 24 chr2 9648884 9649049 -241038805 + MLT1C LTR MaLR 1 180 -210 1382 161 4 37 chr2 9649049 9649292 -241038562 + AluJo SINE Alu 1 235 -77 1026 217 64 4 chr2 9649313 9649562 -241038292 + MLT1C LTR MaLR 199 462 -5 357 195 164 23 chr2 9649788 9649916 -241037938 + MLT1G LTR MaLR 443 588 -2 463 283 193 0 chr2 9650031 9650197 -241037657 + MIR SINE MIR 17 214 -48 2010 223 63 92 chr2 9650204 9650261 -241037593 - MER97a DNA MER1_type? -11 883 826 3156 77 36 32 chr2 9650261 9650703 -241037151 - MLT2A1 LTR ERVL 0 444 1 2010 223 63 92 chr2 9650703 9651552 -241036302 - MER97a DNA MER1_type? -68 826 3 2270 79 3 7 chr2 9651884 9652187 -241035667 + AluY SINE Alu 1 302 -9 2040 134 7 0 chr2 9653054 9653353 -241034501 - AluSx SINE Alu -9 303 3 798 227 0 45 chr2 9654568 9654686 -241033168 + MER3 DNA MER1_type 21 128 -81 2307 99 3 0 chr2 9654686 9654990 -241032864 - AluSq SINE Alu -8 305 1 798 227 0 45 chr2 9654990 9655069 -241032785 + MER3 DNA MER1_type 128 209 0 506 303 11 43 chr2 9655813 9655998 -241031856 + MIR3 SINE MIR 15 193 -15 571 265 46 7 chr2 9656215 9656366 -241031488 + MIR SINE MIR 20 176 -86 1043 113 0 0 chr2 9656434 9656575 -241031279 + AluJb SINE Alu 1 141 -171 189 0 0 0 chr2 9656593 9656614 -241031240 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1597 139 44 26 chr2 9656632 9656905 -241030949 + AluJo SINE Alu 5 282 -30 459 78 0 0 chr2 9656999 9657063 -241030791 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 883 143 88 42 chr2 9657162 9657379 -241030475 - L1MC2 LINE L1 -9 6335 6109 1428 149 0 69 chr2 9657390 9657666 -241030188 - AluJb SINE Alu -6 306 50 421 293 38 25 chr2 9657891 9658048 -241029806 + MER5B DNA MER1_type 11 169 -9 186 273 94 55 chr2 9658083 9658149 -241029705 + MER5B DNA MER1_type 36 98 -80 2052 121 17 0 chr2 9658149 9658447 -241029407 - AluSx SINE Alu -8 304 2 2656 50 0 0 chr2 9658457 9658754 -241029100 - AluY SINE Alu -14 297 1 186 273 94 55 chr2 9658754 9658804 -241029050 + MER5B DNA MER1_type 106 168 -10 1910 155 20 0 chr2 9659368 9659665 -241028189 + AluJo SINE Alu 1 303 -9 715 118 0 152 chr2 9660921 9660954 -241026900 - L1MB5 LINE L1 -10 6164 6128 225 0 0 0 chr2 9660954 9660979 -241026875 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2100 127 0 0 chr2 9660979 9661262 -241026592 - AluSx SINE Alu -29 283 1 715 118 0 152 chr2 9661262 9661291 -241026563 - L1MB5 LINE L1 -45 6129 6097 2336 74 3 0 chr2 9661291 9661597 -241026257 + AluSp SINE Alu 1 307 0 715 118 0 152 chr2 9661597 9661708 -241026146 - L1MB5 LINE L1 -77 6097 6014 1936 149 3 14 chr2 9661756 9662051 -241025803 - AluJo SINE Alu -20 292 1 491 229 186 32 chr2 9663685 9663873 -241023981 - MIR SINE MIR -17 245 29 468 258 94 52 chr2 9664215 9664428 -241023426 + MIR SINE MIR 20 241 -21 649 244 34 11 chr2 9664720 9664896 -241022958 + MIR SINE MIR 36 215 -47 23 54 0 0 chr2 9665055 9665092 -241022762 + AT_rich Low_complexity Low_complexity 1 37 0 204 316 25 0 chr2 9665167 9665246 -241022608 - MIR SINE MIR -29 233 153 1900 161 3 7 chr2 9665922 9666227 -241021627 - AluJb SINE Alu -8 304 1 2729 40 0 0 chr2 9667070 9667372 -241020482 - AluY SINE Alu -9 302 1 704 103 154 0 chr2 9667673 9667790 -241020064 - AluJb SINE Alu -176 136 2 188 290 14 0 chr2 9668368 9668437 -241019417 - MIR SINE MIR -61 147 78 517 127 59 3 chr2 9669854 9670074 -241017780 + AluSx SINE Alu 1 308 -4 608 246 24 12 chr2 9670232 9670399 -241017455 + MER20 DNA MER1_type 36 204 -15 261 98 0 0 chr2 9670470 9670511 -241017343 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 245 300 71 41 chr2 9670565 9670735 -241017119 - L2 LINE L2 -101 3171 2997 254 300 25 0 chr2 9671748 9671828 -241016026 + L2 LINE L2 2997 3078 -194 330 298 141 16 chr2 9672998 9673189 -241014665 - MIR SINE MIR 0 262 48 1058 189 0 0 chr2 9673260 9673424 -241014430 - AluJo SINE Alu -14 298 135 318 50 0 0 chr2 9673425 9673465 -241014389 + (TTTTC)n Simple_repeat Simple_repeat 1 40 0 374 183 0 12 chr2 9673476 9673558 -241014296 + CT-rich Low_complexity Low_complexity 2 82 0 366 357 138 19 chr2 9673558 9673981 -241013873 - HAL1 LINE L1 -1206 1301 881 637 197 7 7 chr2 9673982 9674134 -241013720 + CT-rich Low_complexity Low_complexity 1 152 0 333 177 76 13 chr2 9674134 9674213 -241013641 - AluJo SINE Alu -169 133 50 187 98 0 49 chr2 9674224 9674265 -241013589 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 530 228 49 0 chr2 9674267 9674390 -241013464 - AluJo SINE Alu -173 129 1 421 304 30 0 chr2 9674786 9674921 -241012933 + MLT1H LTR MaLR 406 544 -5 2987 241 70 14 chr2 9675367 9676126 -241011728 - MER21B LTR ERV1 -44 819 19 267 238 60 12 chr2 9676124 9676208 -241011646 - MER21B LTR ERV1 -757 106 19 * 373 186 10 98 chr2 9676207 9676309 -241011545 - MER21B LTR ERV1 -758 105 13 448 297 145 56 chr2 9676729 9677248 -241010606 - L1ME4a LINE L1 -104 6017 5401 2320 122 0 0 chr2 9677248 9677560 -241010294 + AluSx SINE Alu 1 312 0 448 297 145 56 chr2 9677560 9677723 -241010131 - L1ME4a LINE L1 -720 5401 5254 390 314 66 39 chr2 9678023 9678281 -241009573 - L1ME4a LINE L1 -1276 4870 4606 694 167 0 9 chr2 9678292 9678406 -241009448 + FLAM_C SINE Alu 14 126 -17 43 20 0 0 chr2 9678417 9678467 -241009387 + AT_rich Low_complexity Low_complexity 1 50 0 494 297 100 46 chr2 9678467 9679138 -241008716 - L1ME4a LINE L1 -1526 4620 3914 315 0 0 0 chr2 9679151 9679186 -241008668 + (TG)n Simple_repeat Simple_repeat 1 35 0 308 209 185 61 chr2 9679356 9679653 -241008201 + L1ME4a LINE L1 5788 6121 0 377 294 14 25 chr2 9679950 9680124 -241007730 + MIR SINE MIR 17 188 -60 917 263 58 11 chr2 9681793 9682158 -241005696 - HAL1 LINE L1 -1126 1381 1000 247 279 93 66 chr2 9682262 9682393 -241005461 - HAL1 LINE L1 -1651 856 717 2726 36 0 7 chr2 9682393 9682700 -241005154 - AluY SINE Alu -6 305 1 247 279 93 66 chr2 9682700 9682751 -241005103 - HAL1 LINE L1 -1790 717 669 2214 128 0 6 chr2 9683698 9684011 -241003843 - AluSx SINE Alu -1 311 1 273 324 46 17 chr2 9684356 9684529 -241003325 + L3 LINE CR1 1056 1233 -344 2741 205 13 8 chr2 9684546 9685160 -241002694 + L1MB7 LINE L1 4465 5081 -1065 1485 114 5 0 chr2 9685188 9685381 -241002473 + AluSq SINE Alu 1 194 -119 2415 162 54 2 chr2 9685420 9685901 -241001953 + L1MB7 LINE L1 5660 6165 -19 2362 108 0 3 chr2 9686050 9686355 -241001499 + AluSq SINE Alu 1 304 -9 380 290 30 77 chr2 9686375 9686544 -241001310 + L3 LINE CR1 1415 1575 -2 345 227 0 52 chr2 9687427 9687524 -241000330 - MIR SINE MIR -78 130 39 910 140 11 11 chr2 9688137 9688316 -240999538 + CT-rich Low_complexity Low_complexity 2 180 0 223 147 0 0 chr2 9688316 9688350 -240999504 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 1071 261 70 6 chr2 9688352 9688666 -240999188 - L1ME LINE L1 -357 5807 5474 2090 102 7 21 chr2 9689442 9689754 -240998100 - AluSx SINE Alu 0 309 2 307 247 34 0 chr2 9690343 9690432 -240997422 - L1MC5 LINE L1 -62 7899 7808 822 157 0 15 chr2 9690586 9690720 -240997134 + FLAM_C SINE Alu 1 132 -1 447 285 99 17 chr2 9690772 9690944 -240996910 - MIR SINE MIR -15 247 62 21 36 0 0 chr2 9691200 9691228 -240996626 + GC_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr2 9691727 9691754 -240996100 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 2213 137 0 0 chr2 9691773 9692080 -240995774 + AluSx SINE Alu 1 307 -5 315 254 0 0 chr2 9692115 9692182 -240995672 - MIR SINE MIR -106 156 90 360 233 78 0 chr2 9692193 9692283 -240995571 - MER91A DNA MER1_type -11 185 89 384 262 37 9 chr2 9692759 9692866 -240994988 + L3 LINE CR1 1377 1486 -91 593 269 88 0 chr2 9693727 9693898 -240993956 + MIR SINE MIR 77 262 0 325 234 72 36 chr2 9696908 9697019 -240990835 + MIR SINE MIR 65 179 -83 2239 114 10 0 chr2 9697245 9697551 -240990303 + AluSg SINE Alu 1 309 -1 230 312 18 37 chr2 9697940 9698049 -240989805 + MIR3 SINE MIR 93 199 -9 196 259 37 0 chr2 9699173 9699227 -240988627 + MER5A DNA MER1_type 60 115 -74 1917 123 0 49 chr2 9699278 9699586 -240988268 + AluSx SINE Alu 1 293 -19 520 303 135 14 chr2 9700724 9701021 -240986833 + L1ME4a LINE L1 5534 5866 -255 1701 110 0 9 chr2 9701022 9701250 -240986604 - AluJb SINE Alu -15 297 72 7386 210 60 34 chr2 9701250 9702137 -240985717 + L1ME1 LINE L1 3439 4301 -1865 1846 178 3 3 chr2 9702137 9702441 -240985413 + AluJb SINE Alu 1 304 -8 7386 210 60 34 chr2 9702441 9704193 -240983661 + L1ME1 LINE L1 4301 6160 -6 339 281 0 73 chr2 9705147 9705311 -240982543 + L1ME4a LINE L1 5967 6118 -3 387 0 0 0 chr2 9705315 9705358 -240982496 + (GA)n Simple_repeat Simple_repeat 1 43 0 252 0 0 0 chr2 9705357 9705385 -240982469 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 463 216 114 17 chr2 9705703 9705917 -240981937 - L1ME3 LINE L1 -9 6161 5902 268 213 0 43 chr2 9705920 9706108 -240981746 + (TA)n Simple_repeat Simple_repeat 1 180 0 217 203 0 41 chr2 9706120 9706243 -240981611 + (TA)n Simple_repeat Simple_repeat 2 119 0 794 300 92 13 chr2 9706262 9706642 -240981212 - L1ME3 LINE L1 -254 5916 5507 2282 105 10 0 chr2 9706835 9707141 -240980713 + AluSx SINE Alu 1 309 -3 425 270 93 39 chr2 9707679 9707883 -240979971 + MIR SINE MIR 45 259 -3 209 300 120 27 chr2 9708385 9708535 -240979319 + MIR3 SINE MIR 7 170 -38 1193 284 40 55 chr2 9709061 9709632 -240978222 - L1MEd LINE L1 -4869 1250 691 2352 112 0 3 chr2 9709632 9709936 -240977918 - AluSc SINE Alu -6 303 1 1193 284 40 55 chr2 9709936 9710218 -240977636 - L1MEd LINE L1 -5428 691 406 613 286 133 49 chr2 9710600 9710985 -240976869 - MLT1L LTR MaLR 0 615 199 769 64 54 25 chr2 9711278 9711593 -240976261 + (CA)n Simple_repeat Simple_repeat 1 324 0 643 76 64 18 chr2 9711606 9711777 -240976077 + (CA)n Simple_repeat Simple_repeat 2 180 0 462 119 63 13 chr2 9711809 9711968 -240975886 + (CA)n Simple_repeat Simple_repeat 2 168 0 441 334 85 23 chr2 9712624 9712946 -240974908 + L2 LINE L2 2931 3312 -1 303 287 45 38 chr2 9712973 9713130 -240974724 + L1ME4a LINE L1 5830 5987 -134 1666 196 17 26 chr2 9713666 9714013 -240973841 - MLT1A2 LTR MaLR -7 367 24 180 0 0 0 chr2 9714336 9714356 -240973498 + (GGGA)n Simple_repeat Simple_repeat 2 21 0 365 285 46 31 chr2 9714554 9714684 -240973170 + MLT1B LTR MaLR 235 366 -24 291 279 95 7 chr2 9715554 9715701 -240972153 + (CCCCG)n Simple_repeat Simple_repeat 5 164 0 367 247 137 47 chr2 9716831 9717086 -240970768 - MLT1D LTR MaLR -144 361 84 244 250 22 76 chr2 9717792 9717884 -240969970 + MIR3 SINE MIR 101 187 -21 1178 143 46 6 chr2 9717901 9718277 -240969577 - MSTB LTR MaLR 0 426 1 253 346 59 7 chr2 9718281 9718417 -240969437 - MIR SINE MIR -12 250 108 233 276 75 0 chr2 9719436 9719549 -240968305 - MIR SINE MIR -69 139 30 2378 83 3 0 chr2 9720154 9720456 -240967398 - AluSx SINE Alu -9 303 1 580 237 52 65 chr2 9720547 9720779 -240967075 + MIR SINE MIR 23 251 -11 1571 256 81 5 chr2 9720855 9721276 -240966578 - MLT1J LTR MaLR -58 453 1 2058 112 7 0 chr2 9721331 9721625 -240966229 - AluY SINE Alu -15 296 1 2288 54 3 45 chr2 9721634 9721947 -240965907 - AluY SINE Alu -11 300 1 1750 120 6 70 chr2 9722236 9722552 -240965302 + AluJb SINE Alu 1 296 -16 318 298 118 45 chr2 9722555 9722800 -240965054 + L1ME4a LINE L1 5812 6074 -47 2205 81 3 10 chr2 9723096 9723391 -240964463 - AluSq SINE Alu -16 297 5 1872 140 20 3 chr2 9723396 9723689 -240964165 - AluSx SINE Alu -14 298 1 237 222 0 0 chr2 9723980 9724025 -240963829 + MIR3 SINE MIR 112 156 -52 471 189 0 115 chr2 9724494 9724616 -240963238 + FLAM_A SINE Alu 1 108 -34 2250 103 3 0 chr2 9724757 9725068 -240962786 + AluSq SINE Alu 1 312 -1 1853 208 84 18 chr2 9725337 9725775 -240962079 + MLT1C LTR MaLR 1 467 0 482 319 65 10 chr2 9725929 9726199 -240961655 - ERVL LTR ERVL -1974 3550 3210 2055 139 0 0 chr2 9726535 9726844 -240961010 - AluSx SINE Alu -2 310 2 441 237 65 53 chr2 9728444 9728613 -240959241 + MIR SINE MIR 20 190 -72 308 299 331 0 chr2 9728654 9728811 -240959043 - MIR SINE MIR -48 214 6 240 298 32 48 chr2 9729093 9729217 -240958637 - MIR SINE MIR -68 194 73 220 226 16 16 chr2 9729923 9729985 -240957869 - MER5B DNA MER1_type -110 68 7 1700 78 5 0 chr2 9730467 9730686 -240957168 + AluSg/x SINE Alu 80 299 -11 2212 101 0 7 chr2 9731310 9731618 -240956236 + AluSq SINE Alu 1 306 -7 1619 158 13 43 chr2 9732027 9732331 -240955523 + AluJo SINE Alu 1 295 -17 369 209 6 122 chr2 9732377 9732549 -240955305 + Charlie7 DNA MER1_type 317 468 -2144 2076 257 64 43 chr2 9732566 9733282 -240954572 + MER21B LTR ERV1 22 752 -111 3418 236 111 90 chr2 9733315 9733640 -240954214 + Charlie7 DNA MER1_type 523 840 -1772 2137 99 6 16 chr2 9733640 9733953 -240953901 - AluY SINE Alu -1 310 1 3418 236 111 90 chr2 9733953 9733975 -240953879 + Charlie7 DNA MER1_type 840 860 -1752 1808 136 7 20 chr2 9733975 9734276 -240953578 - AluJo SINE Alu -15 297 1 3418 236 111 90 chr2 9734276 9734656 -240953198 + Charlie7 DNA MER1_type 860 1231 -1381 2633 39 0 0 chr2 9734656 9734967 -240952887 + AluY SINE Alu 1 311 0 3418 236 111 90 chr2 9734967 9735609 -240952245 + Charlie7 DNA MER1_type 1231 1858 -754 2198 96 7 13 chr2 9735609 9735912 -240951942 - AluSx SINE Alu -11 301 1 3418 236 111 90 chr2 9735912 9736485 -240951369 + Charlie7 DNA MER1_type 1858 2512 -100 2067 114 0 13 chr2 9736485 9736804 -240951050 + AluSg SINE Alu 1 310 0 3418 236 111 90 chr2 9736804 9736838 -240951016 + Charlie7 DNA MER1_type 2512 2544 -68 2251 78 7 3 chr2 9736848 9737156 -240950698 + AluYb8 SINE Alu 2 310 -8 967 303 149 15 chr2 9737181 9737689 -240950165 + MLT1H1 LTR MaLR 26 555 0 649 139 18 96 chr2 9737787 9737820 -240950034 - L1MB3 LINE L1 -2 6181 6147 2232 97 0 3 chr2 9737820 9738119 -240949735 + AluSx SINE Alu 1 298 -14 359 21 21 0 chr2 9738123 9738171 -240949683 + (CA)n Simple_repeat Simple_repeat 2 50 0 649 139 18 96 chr2 9738171 9738298 -240949556 - L1MB3 LINE L1 -39 6144 6029 1050 84 0 14 chr2 9738301 9738444 -240949410 + AluSq/x SINE Alu 1 141 -171 2087 121 6 10 chr2 9738444 9738758 -240949096 + AluSq SINE Alu 1 313 0 963 170 37 54 chr2 9738758 9738970 -240948884 - L1MB3 LINE L1 -144 6039 5830 1823 137 9 44 chr2 9738970 9739139 -240948715 - AluSx SINE Alu -8 304 150 606 63 0 0 chr2 9739139 9739218 -240948636 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 1823 137 9 44 chr2 9739218 9739363 -240948491 - AluSx SINE Alu -162 150 1 963 170 37 54 chr2 9739363 9739391 -240948463 - L1MB3 LINE L1 -353 5830 5803 2009 128 7 0 chr2 9739391 9739687 -240948167 + AluSx SINE Alu 1 298 -14 190 344 133 31 chr2 9739942 9740198 -240947656 + L2 LINE L2 2991 3272 0 185 338 39 13 chr2 9740323 9740400 -240947454 + MIR SINE MIR 32 110 -152 2015 188 114 53 chr2 9740526 9741015 -240946839 + MLT2B1 LTR ERVL 2 520 0 389 256 120 23 chr2 9742615 9742748 -240945106 - MLT1J LTR MaLR -219 292 147 3663 153 52 48 chr2 9744174 9744299 -240943555 + MER50 LTR ERV1 1 124 -610 2090 117 16 0 chr2 9744299 9744606 -240943248 + AluSx SINE Alu 1 312 0 3663 153 52 48 chr2 9744606 9745210 -240942644 + MER50 LTR ERV1 124 733 -1 264 77 0 0 chr2 9745276 9745315 -240942539 + (TC)n Simple_repeat Simple_repeat 1 39 0 693 170 67 0 chr2 9745522 9745657 -240942197 - MLT1C LTR MaLR 0 467 324 2148 98 10 3 chr2 9746636 9746933 -240940921 + AluSq SINE Alu 1 299 -14 1213 253 10 3 chr2 9746933 9747237 -240940617 + L1MB4 LINE L1 5598 5903 -277 1257 189 70 5 chr2 9747570 9747858 -240939996 + L1MB3 LINE L1 5833 6141 -42 2428 75 3 0 chr2 9747860 9748166 -240939688 + AluSp SINE Alu 1 307 -6 1202 237 48 0 chr2 9749263 9749575 -240938279 - L1MC3 LINE L1 0 7785 7459 182 282 0 0 chr2 9749576 9749615 -240938239 + L2 LINE L2 3139 3177 -95 742 258 32 53 chr2 9749982 9750265 -240937589 + MLT1C LTR MaLR 189 465 -2 462 270 88 7 chr2 9750276 9750424 -240937430 - L2 LINE L2 0 3313 3154 2075 128 0 0 chr2 9750432 9750736 -240937118 + AluSx SINE Alu 3 306 -6 237 222 32 63 chr2 9751504 9751567 -240936287 - L2 LINE L2 0 3272 3212 262 262 68 0 chr2 9752284 9752387 -240935467 - MIR SINE MIR -131 131 22 343 258 37 47 chr2 9753111 9753304 -240934550 - MIR SINE MIR -56 206 14 180 259 37 12 chr2 9753595 9753676 -240934178 + L2 LINE L2 2860 2942 -371 560 171 199 0 chr2 9753680 9753826 -240934028 + MER5A DNA MER1_type 1 175 -14 294 288 75 7 chr2 9753828 9753974 -240933880 + L2 LINE L2 2953 3108 -205 2175 109 3 7 chr2 9755861 9756165 -240931689 - AluSq SINE Alu -10 303 1 321 268 101 57 chr2 9756487 9756715 -240931139 - MER112 DNA MER1_type -6 254 17 996 75 0 0 chr2 9756723 9756857 -240930997 + AluSg/x SINE Alu 176 309 -3 2202 107 7 7 chr2 9756861 9757169 -240930685 + AluSc SINE Alu 2 309 0 2138 121 3 6 chr2 9757228 9757541 -240930313 + AluSx SINE Alu 1 312 0 512 244 71 56 chr2 9757706 9757903 -240929951 + L2 LINE L2 1381 1580 -1734 382 249 116 35 chr2 9757943 9758116 -240929738 + MER53 DNA DNA 3 189 0 * 1283 199 106 23 chr2 9758116 9758506 -240929348 + MLT1F LTR MaLR 104 542 0 719 264 147 15 chr2 9758516 9758842 -240929012 + L2 LINE L2 1590 1958 -1356 405 272 12 74 chr2 9758843 9759005 -240928849 - L2 LINE L2 -2 3311 3160 370 267 93 25 chr2 9759014 9759175 -240928679 + L1MC5 LINE L1 7730 7901 -60 608 292 51 4 chr2 9759275 9759544 -240928310 - L2 LINE L2 -298 3015 2726 1094 236 8 4 chr2 9759571 9759830 -240928024 + AluJo SINE Alu 21 280 -32 408 326 36 41 chr2 9759860 9760056 -240927798 + L2 LINE L2 2334 2528 -786 2473 100 0 0 chr2 9760564 9760875 -240926979 + AluSx SINE Alu 1 311 -1 605 274 54 0 chr2 9760889 9761057 -240926797 + L1PB4 LINE L1 5966 6142 -14 443 216 48 84 chr2 9761129 9761296 -240926558 + L1MC4a LINE L1 5764 5924 -1884 1706 92 0 0 chr2 9761439 9761656 -240926198 - AluY SINE Alu 0 311 95 617 41 0 0 chr2 9761656 9761729 -240926125 + AluY SINE Alu 27 99 -212 374 284 106 29 chr2 9762538 9762746 -240925108 - MIR SINE MIR -31 231 8 298 276 14 48 chr2 9763393 9763538 -240924316 + GA-rich Low_complexity Low_complexity 4 143 0 636 183 58 8 chr2 9763785 9763905 -240923949 - FLAM_A SINE Alu -8 134 9 1075 182 43 34 chr2 9764102 9764275 -240923579 - MER46A DNA MER2_type -2495 236 59 2027 152 139 16 chr2 9764275 9764656 -240923198 + MSTA LTR MaLR 1 428 0 1075 182 43 34 chr2 9764656 9764691 -240923163 - MER46A DNA MER2_type -2672 59 26 2365 89 0 0 chr2 9766387 9766680 -240921174 - AluSc SINE Alu -16 293 1 185 415 13 21 chr2 9766960 9767194 -240920660 + L2 LINE L2 2505 2736 -578 239 319 34 50 chr2 9767243 9767362 -240920492 + L2 LINE L2 3073 3189 -83 2345 98 0 0 chr2 9767554 9767851 -240920003 + AluY SINE Alu 1 297 -14 4132 173 40 12 chr2 9769244 9770066 -240917788 + L1MB7 LINE L1 5321 6165 -19 262 281 99 23 chr2 9772462 9772633 -240915221 - MIR SINE MIR -46 216 33 570 43 0 0 chr2 9772902 9772972 -240914882 + MER41B LTR ERV1 478 547 -88 252 250 31 0 chr2 9773528 9773592 -240914262 + C-rich Low_complexity Low_complexity 4 69 0 22 0 0 0 chr2 9774161 9774183 -240913671 + AT_rich Low_complexity Low_complexity 1 22 0 405 321 132 5 chr2 9774334 9774524 -240913330 + L1MB8 LINE L1 5448 5661 -2147 1678 153 29 4 chr2 9774733 9775014 -240912840 + AluJo SINE Alu 1 288 -24 243 261 87 33 chr2 9775478 9775570 -240912284 + L2 LINE L2 3158 3254 -18 190 381 137 6 chr2 9776522 9776837 -240911017 + L2 LINE L2 2127 2482 -832 284 329 0 12 chr2 9778323 9778408 -240909446 - L2 LINE L2 -9 3304 3221 2848 179 38 30 chr2 9778500 9778809 -240909045 + L1MB8 LINE L1 5509 5814 -364 2027 140 49 6 chr2 9778809 9779137 -240908717 + MER2 DNA MER2_type 2 343 -1 2848 179 38 30 chr2 9779137 9779459 -240908395 + L1MB8 LINE L1 5814 6145 -33 254 224 0 0 chr2 9779462 9779511 -240908343 + L1MB8 LINE L1 6097 6145 -33 251 224 0 0 chr2 9779514 9779563 -240908291 + L1MB8 LINE L1 6097 6145 -33 424 209 0 0 chr2 9779566 9779652 -240908202 + L1MB7 LINE L1 6099 6184 0 413 152 30 0 chr2 9779703 9779769 -240908085 + Tigger2 DNA MER2_type 2 69 -2649 * 1903 146 56 11 chr2 9779755 9780111 -240907743 + Tigger2 DNA MER2_type 2270 2641 -77 1137 120 0 0 chr2 9780232 9780465 -240907389 + (TA)n Simple_repeat Simple_repeat 1 233 0 2307 88 0 7 chr2 9780465 9780759 -240907095 - AluSc SINE Alu -17 292 1 380 209 0 0 chr2 9780759 9780826 -240907028 + Tigger2 DNA MER2_type 2651 2717 -1 1098 121 143 27 chr2 9781396 9781620 -240906234 - L1MB3 LINE L1 0 6183 5934 227 97 0 0 chr2 9781950 9781981 -240905873 + L1ME3 LINE L1 6124 6154 -8 1724 131 39 18 chr2 9783305 9783587 -240904267 - AluJo SINE Alu -15 297 10 216 218 0 0 chr2 9784778 9784869 -240902985 + GA-rich Low_complexity Low_complexity 1 91 0 1758 149 21 4 chr2 9784912 9785226 -240902628 + AluJb SINE Alu 1 312 0 22 56 0 0 chr2 9785831 9785867 -240901987 + AT_rich Low_complexity Low_complexity 1 36 0 2394 75 3 7 chr2 9786318 9786626 -240901228 - AluSg SINE Alu -3 307 1 618 255 57 0 chr2 9786678 9786835 -240901019 + HAL1 LINE L1 1 166 -2341 392 290 181 36 chr2 9787028 9787249 -240900605 + HAL1 LINE L1 599 851 -1656 574 249 90 37 chr2 9787371 9787560 -240900294 - HAL1 LINE L1 -761 1746 1548 1007 276 117 8 chr2 9787576 9787897 -240899957 + HAL1 LINE L1 1771 2142 -365 1626 164 31 31 chr2 9787897 9788190 -240899664 + AluJo SINE Alu 1 293 -19 1007 276 117 8 chr2 9788190 9788252 -240899602 + HAL1 LINE L1 2142 2196 -311 230 133 0 22 chr2 9788310 9788355 -240899499 + (GA)n Simple_repeat Simple_repeat 2 45 0 347 280 43 0 chr2 9788355 9788448 -240899406 + HAL1 LINE L1 2334 2430 -77 1567 131 85 4 chr2 9788505 9788764 -240899090 - AluJb SINE Alu -10 302 23 2072 122 0 0 chr2 9788772 9789080 -240898774 - AluSx SINE Alu 0 321 14 24 85 0 0 chr2 9789150 9789209 -240898645 + AT_rich Low_complexity Low_complexity 1 59 0 3589 109 40 32 chr2 9789378 9789901 -240897953 - MER1A DNA MER1_type 0 527 1 191 279 29 15 chr2 9790083 9790151 -240897703 + L2 LINE L2 3245 3313 0 872 163 6 25 chr2 9790162 9790322 -240897532 - FRAM SINE Alu -19 157 1 3143 230 86 32 chr2 9791209 9792214 -240895640 + Tigger6a DNA MER2_type 2 1060 -23 281 324 29 10 chr2 9792978 9793080 -240894774 - MIR3 SINE MIR -54 154 51 324 225 90 9 chr2 9793600 9793711 -240894143 + L1ME4a LINE L1 5735 5854 -267 319 297 74 20 chr2 9793792 9793940 -240893914 + L1ME4a LINE L1 5966 6121 0 2337 92 0 3 chr2 9794246 9794552 -240893302 - AluY SINE Alu -6 305 1 1703 162 18 7 chr2 9794726 9795004 -240892850 + AluJb SINE Alu 7 287 -25 409 196 322 19 chr2 9795153 9795539 -240892315 + LTR50 LTR ERVL 136 736 -59 2169 128 40 15 chr2 9797123 9797452 -240890402 - MER1B DNA MER1_type 0 337 1 752 159 46 26 chr2 9798023 9798174 -240889680 - MER103 DNA DNA -1 165 12 697 295 14 5 chr2 9798198 9798408 -240889446 - MIR SINE MIR -45 217 6 623 213 104 97 chr2 9799320 9799531 -240888323 + MIR SINE MIR 3 216 -46 1774 154 59 0 chr2 9799531 9799817 -240888037 + AluSx SINE Alu 1 303 -9 623 213 104 97 chr2 9799817 9799865 -240887989 + MIR SINE MIR 216 262 0 234 0 0 0 chr2 9800939 9800965 -240886889 + (TTA)n Simple_repeat Simple_repeat 2 27 0 505 200 0 0 chr2 9800965 9801045 -240886809 - FLAM SINE Alu -22 121 42 1220 151 5 15 chr2 9801164 9801370 -240886484 + L1MA8 LINE L1 6083 6286 -5 2242 75 0 42 chr2 9802494 9802801 -240885053 + AluY SINE Alu 1 294 -17 476 210 51 80 chr2 9803003 9803141 -240884713 + L2 LINE L2 3176 3309 -4 537 200 183 8 chr2 9804160 9804280 -240883574 - FLAM_A SINE Alu -1 141 1 1672 149 12 81 chr2 9804690 9804822 -240883032 + AluJo SINE Alu 1 140 -172 2212 107 3 22 chr2 9804822 9805139 -240882715 + AluSx SINE Alu 1 311 -1 1672 149 12 81 chr2 9805139 9805341 -240882513 + AluJo SINE Alu 140 312 0 2014 113 0 4 chr2 9805697 9805971 -240881883 - AluSx SINE Alu -18 294 22 868 162 125 97 chr2 9805997 9806213 -240881641 + AluJo SINE Alu 84 305 -7 210 150 0 0 chr2 9807061 9807101 -240880753 + (TAA)n Simple_repeat Simple_repeat 2 41 0 2221 115 0 0 chr2 9807153 9807448 -240880406 - AluSx SINE Alu -17 295 1 463 155 28 0 chr2 9807510 9807581 -240880273 - AluJ/FRAM SINE Alu -20 292 220 741 261 48 69 chr2 9807592 9807926 -240879928 - MER46C DNA MER2_type -11 327 1 258 260 55 0 chr2 9808758 9808831 -240879023 + HAL1 LINE L1 57 133 -2374 245 248 48 166 chr2 9809017 9809348 -240878506 + HAL1 LINE L1 424 715 -1792 2324 89 30 0 chr2 9809406 9809708 -240878146 - AluSx SINE Alu -1 311 1 2033 154 0 0 chr2 9809738 9810037 -240877817 - AluJb SINE Alu -13 299 1 380 277 236 54 chr2 9810109 9810499 -240877355 - L2 LINE L2 0 3313 2853 1217 223 65 60 chr2 9810523 9810890 -240876964 + L1M4 LINE L1 799 1167 -5375 * 1346 206 122 19 chr2 9810887 9811228 -240876626 + L1MB7 LINE L1 5725 6118 -66 930 140 0 22 chr2 9811228 9811364 -240876490 - FLAM_A SINE Alu 0 133 1 1346 206 122 19 chr2 9811364 9811439 -240876415 + L1MB7 LINE L1 6118 6184 0 339 257 53 82 chr2 9811455 9811661 -240876193 - L1MC4 LINE L1 -404 7638 7439 234 81 0 0 chr2 9812317 9812354 -240875500 + (TATG)n Simple_repeat Simple_repeat 1 37 0 1752 132 17 38 chr2 9812354 9812641 -240875213 - AluJo SINE Alu -31 281 1 1779 172 10 3 chr2 9813979 9814282 -240873572 - AluSx SINE Alu -7 305 1 1862 178 0 0 chr2 9814504 9814802 -240873052 + AluJo SINE Alu 5 302 -10 1027 173 32 5 chr2 9815103 9815288 -240872566 - MER3 DNA MER1_type 0 209 20 254 269 0 0 chr2 9815368 9815435 -240872419 + L1ME4a LINE L1 5753 5819 -1989 220 376 94 0 chr2 9816314 9816463 -240871391 + L2 LINE L2 2681 2843 -471 190 337 157 56 chr2 9816565 9816871 -240870983 + L2 LINE L2 2933 3269 -3 817 150 1 45 chr2 9816975 9817150 -240870704 + L1MC1 LINE L1 5398 5558 -615 * 829 206 36 10 chr2 9817149 9817343 -240870511 - HAL1 LINE L1 -651 1856 1658 1128 31 0 0 chr2 9817362 9817490 -240870364 - SVA Other Other 0 1386 1259 400 138 0 0 chr2 9817491 9817549 -240870305 + Alu SINE Alu 236 293 -19 235 298 85 59 chr2 9817555 9817860 -240869994 + HAL1 LINE L1 1860 2172 -335 4316 173 32 5 chr2 9817863 9818621 -240869233 + L1MC1 LINE L1 5544 6321 -12 1829 153 10 32 chr2 9819080 9819394 -240868460 + AluJo SINE Alu 1 307 -5 398 277 10 10 chr2 9819444 9819545 -240868309 - L2 LINE L2 -25 3288 3188 2261 75 0 7 chr2 9820597 9820917 -240866937 + AluY SINE Alu 16 311 0 907 136 40 40 chr2 9820929 9821105 -240866749 + L1PA16 LINE L1 5991 6166 0 21 0 0 0 chr2 9821105 9821126 -240866728 + AT_rich Low_complexity Low_complexity 1 21 0 856 201 69 0 chr2 9821981 9822170 -240865684 - MER105 DNA DNA 0 204 3 22 0 0 0 chr2 9822555 9822577 -240865277 + AT_rich Low_complexity Low_complexity 1 22 0 280 261 134 8 chr2 9822656 9822790 -240865064 + L1ME4a LINE L1 5969 6119 -2 992 202 5 11 chr2 9823089 9823277 -240864577 - AluJo SINE Alu -125 187 1 409 322 35 14 chr2 9823406 9823549 -240864305 - MIR SINE MIR -111 151 6 459 289 72 0 chr2 9823550 9823619 -240864235 + MIR3 SINE MIR 34 97 -111 2328 98 0 10 chr2 9823619 9823926 -240863928 + AluY SINE Alu 1 304 -7 459 289 72 0 chr2 9823926 9824008 -240863846 + MIR3 SINE MIR 97 196 -12 2088 80 8 0 chr2 9824906 9825169 -240862685 - AluSp SINE Alu -15 298 34 473 261 33 20 chr2 9825333 9825486 -240862368 - L2 LINE L2 0 3313 3159 881 176 14 0 chr2 9825491 9825639 -240862215 - MER58A DNA MER1_type -36 188 39 820 189 47 115 chr2 9825660 9825998 -240861856 + LTR37A LTR ERV1 40 354 -72 37 0 0 0 chr2 9826001 9826038 -240861816 + AT_rich Low_complexity Low_complexity 1 37 0 801 160 0 8 chr2 9826038 9826157 -240861697 - FLAM_C SINE Alu -15 118 1 318 244 0 0 chr2 9826157 9826239 -240861615 + LTR37A LTR ERV1 345 426 0 570 192 106 0 chr2 9826432 9826536 -240861318 - FLAM_A SINE Alu -20 122 8 32 86 0 0 chr2 9826578 9826659 -240861195 + AT_rich Low_complexity Low_complexity 1 81 0 344 250 0 0 chr2 9826902 9826966 -240860888 - L2 LINE L2 -548 2766 2703 204 40 0 0 chr2 9826978 9827003 -240860851 + (TG)n Simple_repeat Simple_repeat 2 26 0 27 39 0 19 chr2 9827003 9827027 -240860827 + AT_rich Low_complexity Low_complexity 1 24 -27 1879 159 0 10 chr2 9827027 9827316 -240860538 - AluJo SINE Alu -26 286 1 27 39 0 19 chr2 9827316 9827343 -240860511 + AT_rich Low_complexity Low_complexity 24 51 0 1348 268 101 87 chr2 9827344 9828088 -240859766 - L2 LINE L2 -619 2695 1942 1647 152 77 46 chr2 9828158 9828507 -240859347 - MER46B DNA MER2_type 0 236 2 222 283 9 142 chr2 9828854 9828960 -240858894 + L2 LINE L2 3144 3235 -37 1793 147 24 10 chr2 9829083 9829376 -240858478 - AluSx SINE Alu -15 297 1 1666 144 0 118 chr2 9829476 9829815 -240858039 + AluJo SINE Alu 1 299 -3 1931 153 44 0 chr2 9830108 9830402 -240857452 + AluSx SINE Alu 1 307 -5 1740 164 3 14 chr2 9831188 9831474 -240856380 + AluJo SINE Alu 1 283 -29 495 87 0 0 chr2 9831482 9831551 -240856303 + (CGTAA)n Simple_repeat Simple_repeat 3 71 0 2302 100 0 10 chr2 9831672 9831981 -240855873 - AluSg SINE Alu -4 306 1 2269 126 0 0 chr2 9831981 9832291 -240855563 - AluSx SINE Alu -2 310 1 2281 79 0 0 chr2 9832329 9832609 -240855245 + AluY SINE Alu 1 280 -31 207 0 0 0 chr2 9833029 9833052 -240854802 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 987 89 8 0 chr2 9834104 9834227 -240853627 + AluSq/x SINE Alu 14 137 -175 2119 87 15 84 chr2 9834227 9834559 -240853295 + AluSq SINE Alu 1 309 -4 245 324 65 0 chr2 9834802 9834910 -240852944 + L2 LINE L2 2383 2497 -817 234 330 175 19 chr2 9835547 9835753 -240852101 + L2 LINE L2 2593 2830 -484 1911 142 13 7 chr2 9837156 9837458 -240850396 + AluSx SINE Alu 1 304 -8 314 299 110 13 chr2 9838261 9838415 -240849439 - MIR SINE MIR -47 215 47 2331 74 14 3 chr2 9838721 9839017 -240848837 - AluY SINE Alu -12 299 1 339 25 0 0 chr2 9839117 9839157 -240848697 + (CA)n Simple_repeat Simple_repeat 2 41 0 603 171 314 44 chr2 9840518 9840770 -240847084 + MER5C DNA MER1_type 5 324 0 219 280 0 54 chr2 9841145 9841238 -240846616 - MER5B DNA MER1_type -76 102 15 180 292 21 62 chr2 9841152 9841248 -240846606 + MER5A DNA MER1_type 94 185 -4 * 487 261 32 37 chr2 9841949 9842137 -240845717 + L1MC4 LINE L1 7492 7678 -364 263 345 12 30 chr2 9842332 9842500 -240845354 + L1MC4 LINE L1 7860 8024 -18 2389 97 3 0 chr2 9842500 9842808 -240845046 - AluSx SINE Alu -3 309 1 1491 201 18 41 chr2 9842874 9843217 -240844637 - MER58B DNA MER1_type 0 341 7 1466 169 27 37 chr2 9843358 9843654 -240844200 - AluJo SINE Alu -19 293 1 924 182 25 0 chr2 9843801 9843960 -240843894 + FRAM SINE Alu 1 162 -14 1203 170 166 0 chr2 9844538 9844815 -240843039 - MER33 DNA MER1_type 0 324 2 2513 68 0 0 chr2 9845148 9845456 -240842398 + AluSg SINE Alu 1 308 -2 279 320 0 40 chr2 9845461 9845561 -240842293 + MIR SINE MIR 20 115 -147 204 158 0 0 chr2 9845575 9845613 -240842241 + A-rich Low_complexity Low_complexity 1 38 0 2194 118 3 0 chr2 9846102 9846399 -240841455 + AluSx SINE Alu 1 298 -14 190 394 20 10 chr2 9846400 9846499 -240841355 - MER5A DNA MER1_type -54 135 36 283 192 39 0 chr2 9847918 9847970 -240839884 - MIR SINE MIR -63 145 92 1950 140 13 3 chr2 9848116 9848423 -240839431 + AluSx SINE Alu 1 310 -2 342 88 99 11 chr2 9848423 9848514 -240839340 + GA-rich Low_complexity Low_complexity 2 100 0 2057 117 14 0 chr2 9850225 9850515 -240837339 + AluSx SINE Alu 1 294 -18 251 185 56 0 chr2 9851351 9851405 -240836449 - L2 LINE L2 -1 3312 3256 * 323 304 20 10 chr2 9851402 9851504 -240836350 - L2 LINE L2 -3172 142 40 277 289 109 45 chr2 9851772 9851928 -240835926 + MER103 DNA DNA 1 166 0 1047 148 0 6 chr2 9851984 9852146 -240835708 + AluJo SINE Alu 1 161 -151 1601 162 3 56 chr2 9852583 9852886 -240834968 + AluJb SINE Alu 1 287 -25 2033 123 3 7 chr2 9853514 9853806 -240834048 - AluSx SINE Alu -21 291 1 202 270 0 0 chr2 9854099 9854173 -240833681 + A-rich Low_complexity Low_complexity 1 74 0 2297 106 3 0 chr2 9854262 9854563 -240833291 - AluSp SINE Alu -11 302 1 2175 116 3 0 chr2 9854565 9854859 -240832995 - AluSx SINE Alu -17 295 1 28 0 0 0 chr2 9855053 9855081 -240832773 + AT_rich Low_complexity Low_complexity 1 28 0 522 220 61 8 chr2 9855327 9855459 -240832395 + MIR SINE MIR 124 262 0 430 245 19 0 chr2 9855601 9855707 -240832147 + L1ME4a LINE L1 5562 5669 -452 2205 118 3 3 chr2 9856273 9856570 -240831284 + AluSx SINE Alu 1 297 -15 404 247 0 0 chr2 9856631 9856724 -240831130 + L1MC4 LINE L1 7805 7897 -145 2442 56 3 7 chr2 9856857 9857161 -240830693 + AluY SINE Alu 1 303 -8 1018 130 18 18 chr2 9857161 9857330 -240830524 + AluSg/x SINE Alu 132 300 -10 1927 92 78 0 chr2 9857337 9857608 -240830246 + AluSq SINE Alu 1 292 -21 1422 184 25 0 chr2 9857745 9858023 -240829831 - AluJo SINE Alu -27 285 1 185 267 0 67 chr2 9858706 9858781 -240829073 + L2 LINE L2 825 894 -2420 2363 137 9 0 chr2 9859078 9859428 -240828426 - L1PA16 LINE L1 -10 6156 5804 250 147 120 13 chr2 9859461 9859536 -240828318 + L1ME4a LINE L1 5732 5814 -1994 1939 104 85 0 chr2 9859542 9859812 -240828042 - AluSx SINE Alu -19 293 1 438 246 77 8 chr2 9860861 9860991 -240826863 + MIR SINE MIR 112 250 -12 23 0 0 0 chr2 9861015 9861038 -240826816 + AT_rich Low_complexity Low_complexity 1 23 0 618 250 85 0 chr2 9861175 9861339 -240826515 + MIR SINE MIR 57 234 -28 30 0 0 0 chr2 9861966 9861996 -240825858 + AT_rich Low_complexity Low_complexity 1 30 0 442 192 178 14 chr2 9862174 9862268 -240825586 + L1ME4a LINE L1 5930 6007 -114 1367 171 65 52 chr2 9862268 9862577 -240825277 - AluSq SINE Alu 0 313 1 442 192 178 14 chr2 9862577 9862628 -240825226 + L1ME4a LINE L1 6007 6099 -22 188 100 25 0 chr2 9862630 9862670 -240825184 + (TA)n Simple_repeat Simple_repeat 2 42 0 468 77 0 0 chr2 9862670 9862735 -240825119 + (CA)n Simple_repeat Simple_repeat 2 66 0 2263 85 0 4 chr2 9862799 9863118 -240824736 + AluSc SINE Alu 1 318 0 831 176 0 0 chr2 9863119 9863244 -240824610 + FLAM_C SINE Alu 1 125 -8 220 51 26 26 chr2 9863624 9863641 -240824213 + (CAAAA)n Simple_repeat Simple_repeat 2 18 -22 2259 118 0 6 chr2 9863641 9863955 -240823899 + AluSx SINE Alu 1 312 0 220 51 26 26 chr2 9863955 9863976 -240823878 + (CAAAA)n Simple_repeat Simple_repeat 17 40 0 201 74 0 0 chr2 9864588 9864615 -240823239 + (T)n Simple_repeat Simple_repeat 1 27 0 2306 106 3 3 chr2 9865234 9865546 -240822308 + AluSp SINE Alu 1 312 -1 1919 164 0 3 chr2 9865899 9866192 -240821662 + AluSx SINE Alu 1 292 -20 1120 165 0 35 chr2 9867238 9867438 -240820416 + AluJb SINE Alu 120 312 0 1126 180 77 77 chr2 9867578 9867746 -240820108 + MLT1E2 LTR MaLR 10 176 -450 2185 109 3 0 chr2 9867746 9868052 -240819802 + AluSg SINE Alu 1 307 0 1126 180 77 77 chr2 9868052 9868110 -240819744 + MLT1E2 LTR MaLR 176 232 -394 1768 181 19 10 chr2 9868110 9868419 -240819435 + AluJo SINE Alu 1 312 0 1126 180 77 77 chr2 9868419 9868619 -240819235 + MLT1E2 LTR MaLR 232 436 -190 562 224 131 27 chr2 9868715 9868898 -240818956 + MLT1E2 LTR MaLR 422 623 -3 525 283 107 29 chr2 9869277 9869736 -240818118 + L1MC4a LINE L1 5394 5817 -304 2366 112 0 0 chr2 9869821 9870126 -240817728 - AluSx SINE Alu -7 305 1 2170 130 0 0 chr2 9870128 9870427 -240817427 - AluSx SINE Alu -13 299 1 2041 145 0 19 chr2 9870643 9870961 -240816893 - AluJb SINE Alu 0 312 1 279 0 0 0 chr2 9871028 9871059 -240816795 + (TG)n Simple_repeat Simple_repeat 2 32 0 198 323 96 55 chr2 9872297 9872517 -240815337 + MIR SINE MIR 22 250 -12 970 195 59 0 chr2 9872521 9872742 -240815112 + MSTB LTR MaLR 1 234 -192 467 144 103 10 chr2 9872962 9873059 -240814795 - MER5A DNA MER1_type -83 106 1 363 272 57 7 chr2 9873434 9873595 -240814259 + MIR SINE MIR 14 184 -62 293 296 82 41 chr2 9874774 9874970 -240812884 + L2 LINE L2 2997 3200 -72 261 98 0 0 chr2 9874998 9875039 -240812815 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 579 246 24 12 chr2 9875110 9875277 -240812577 - MER20 DNA MER1_type -15 204 36 27 29 0 0 chr2 9875663 9875697 -240812157 + AT_rich Low_complexity Low_complexity 1 34 0 379 238 0 10 chr2 9875725 9875826 -240812028 - FLAM_C SINE Alu -7 126 27 1933 108 17 21 chr2 9876001 9876289 -240811565 - AluSg SINE Alu -23 287 1 1071 84 7 14 chr2 9876289 9876431 -240811423 - AluSq/x SINE Alu -172 141 1 652 139 18 96 chr2 9876434 9876561 -240811293 + L1MB3 LINE L1 6029 6164 -19 359 21 21 0 chr2 9876561 9876609 -240811245 + (TG)n Simple_repeat Simple_repeat 2 50 0 2213 101 10 7 chr2 9876613 9876910 -240810944 - AluSx SINE Alu -14 298 1 652 139 18 96 chr2 9876910 9876943 -240810911 + L1MB3 LINE L1 6167 6181 -2 612 237 40 48 chr2 9877042 9877291 -240810563 - MLT1H1 LTR MaLR 0 555 309 395 310 96 13 chr2 9877320 9877550 -240810304 - MLT1H1 LTR MaLR -319 276 33 1721 126 13 32 chr2 9877582 9877891 -240809963 - AluY SINE Alu -8 303 1 625 149 17 74 chr2 9878310 9878485 -240809369 + AluJb SINE Alu 131 295 -17 368 209 6 122 chr2 9878532 9878704 -240809150 + Charlie7 DNA MER1_type 317 468 -2144 1859 250 67 46 chr2 9878721 9879437 -240808417 + MER21B LTR ERV1 22 752 -111 329 289 30 68 chr2 9879474 9879737 -240808117 + Charlie7 DNA MER1_type 527 779 -1833 237 118 29 73 chr2 9880359 9880427 -240807427 - FLAM SINE Alu -25 108 44 238 254 63 0 chr2 9880937 9881000 -240806854 - MIR3 SINE MIR -30 178 112 2004 127 28 3 chr2 9881289 9881580 -240806274 + AluSx SINE Alu 1 298 -14 2449 80 3 10 chr2 9881585 9881896 -240805958 + AluSq SINE Alu 5 313 0 1869 120 6 70 chr2 9882443 9882759 -240805095 - AluJb SINE Alu -16 296 1 2469 50 6 44 chr2 9883048 9883368 -240804486 + AluY SINE Alu 1 308 -3 2176 112 7 0 chr2 9883379 9883673 -240804181 + AluY SINE Alu 1 296 -15 1470 254 81 5 chr2 9883728 9884149 -240803705 + MLT1J LTR MaLR 1 453 -58 225 239 28 113 chr2 9884225 9884367 -240803487 - MIR SINE MIR -11 251 122 358 252 47 19 chr2 9885018 9885125 -240802729 + L3 LINE CR1 1377 1486 -91 628 241 171 0 chr2 9885968 9886155 -240801699 + MIR SINE MIR 44 262 0 340 243 72 36 chr2 9889163 9889274 -240798580 + MIR SINE MIR 65 179 -83 2096 112 14 0 chr2 9889500 9889795 -240798059 + AluSg SINE Alu 1 299 -11 2337 98 0 7 chr2 9890417 9890723 -240797131 + AluSq SINE Alu 1 304 -9 839 169 0 8 chr2 9891134 9891264 -240796590 + FLAM_C SINE Alu 1 129 -14 262 67 44 0 chr2 9891370 9891415 -240796439 + GA-rich Low_complexity Low_complexity 1 47 0 470 149 44 70 chr2 9891417 9891450 -240796404 + MER3 DNA MER1_type 98 130 -79 1123 175 171 52 chr2 9891450 9891585 -240796269 - AluJo SINE Alu 0 302 184 2391 100 3 0 chr2 9891585 9891885 -240795969 - AluSp SINE Alu -12 301 1 1123 175 171 52 chr2 9891885 9892018 -240795836 - AluJo SINE Alu -118 184 2 470 149 44 70 chr2 9892018 9892098 -240795756 + MER3 DNA MER1_type 130 208 -1 244 229 0 0 chr2 9892058 9892106 -240795748 - MER3 DNA MER1_type -121 88 41 * 1818 165 7 11 chr2 9892618 9892903 -240794951 + AluJo SINE Alu 8 291 -21 180 0 0 0 chr2 9892981 9893001 -240794853 + (TG)n Simple_repeat Simple_repeat 1 20 0 582 290 67 40 chr2 9893519 9893743 -240794111 + MIR SINE MIR 13 242 -20 250 203 195 0 chr2 9894030 9894148 -240793706 + L1ME LINE L1 5711 5851 -270 337 239 159 11 chr2 9894154 9894242 -240793612 + AluSg SINE Alu 24 124 -176 2293 104 0 0 chr2 9894276 9894574 -240793280 - AluSx SINE Alu -14 298 1 1275 148 0 5 chr2 9894719 9894915 -240792939 - AluJb SINE Alu -1 311 117 284 127 0 0 chr2 9894927 9894982 -240792872 - Alu SINE Alu -1 300 246 1789 123 0 4 chr2 9894989 9895241 -240792613 + AluSx SINE Alu 62 312 0 768 193 7 7 chr2 9895992 9896137 -240791717 + MER45A DNA AcHobo 34 178 0 375 375 106 27 chr2 9896230 9896606 -240791248 - L2 LINE L2 -458 2856 2451 1401 242 35 33 chr2 9896717 9896897 -240790957 + L1M4 LINE L1 4521 4699 -1447 2390 93 0 3 chr2 9896897 9897208 -240790646 + AluSx SINE Alu 1 310 -2 1401 242 35 33 chr2 9897208 9897510 -240790344 + L1M4 LINE L1 4699 5004 -1142 1226 153 5 63 chr2 9897510 9897732 -240790122 + AluSx SINE Alu 1 209 -103 2090 119 10 26 chr2 9897832 9898143 -240789711 + AluSq SINE Alu 1 306 -7 1630 184 7 7 chr2 9898153 9898431 -240789423 + AluJo SINE Alu 23 300 -12 993 250 12 19 chr2 9898439 9898537 -240789317 + L1MC4a LINE L1 6513 6610 -1198 186 43 0 0 chr2 9898537 9898560 -240789294 + (GA)n Simple_repeat Simple_repeat 2 24 0 993 250 12 19 chr2 9898560 9898717 -240789137 + L1MC4a LINE L1 6610 6766 -1042 318 145 0 105 chr2 9898886 9898944 -240788910 + L1MC4 LINE L1 7975 8025 -17 2142 151 0 3 chr2 9898944 9899256 -240788598 + AluJb SINE Alu 1 311 -1 318 145 0 105 chr2 9899256 9899273 -240788581 + L1MC4 LINE L1 8025 8042 0 600 254 159 6 chr2 9899391 9899718 -240788136 + L2 LINE L2 143 519 -2795 624 206 84 0 chr2 9899760 9899918 -240787936 + MER3 DNA MER1_type 1 123 -86 1861 167 17 3 chr2 9899935 9900234 -240787620 - AluJb SINE Alu -9 303 1 938 178 0 30 chr2 9900245 9900414 -240787440 - AluJb SINE Alu -25 287 124 1525 184 3 63 chr2 9900577 9900911 -240786943 - AluJo SINE Alu 0 312 1 235 30 0 0 chr2 9900913 9900946 -240786908 - L1PA12 LINE L1 -2 6166 6134 829 152 0 15 chr2 9900946 9901078 -240786776 + FLAM_C SINE Alu 1 130 -3 186 259 56 19 chr2 9901095 9901149 -240786705 - L3 LINE CR1 -1194 383 328 2020 146 13 0 chr2 9901311 9901612 -240786242 - AluJb SINE Alu -7 305 1 1917 155 14 0 chr2 9902055 9902346 -240785508 + AluJb SINE Alu 1 295 -17 2417 84 3 3 chr2 9902351 9902650 -240785204 + AluSp SINE Alu 1 299 -14 2138 143 0 0 chr2 9902888 9903181 -240784673 + AluSx SINE Alu 1 293 -19 1753 161 7 4 chr2 9903450 9903730 -240784124 - AluJb SINE Alu -31 281 1 368 289 48 54 chr2 9903730 9903896 -240783958 + L1ME4a LINE L1 5912 6076 -45 1565 124 5 0 chr2 9903897 9904107 -240783747 + AluSx SINE Alu 58 268 -44 2491 78 7 0 chr2 9904218 9904524 -240783330 + AluSc SINE Alu 1 308 -1 181 243 216 27 chr2 9905960 9906034 -240781820 + L2 LINE L2 3185 3272 0 296 316 74 26 chr2 9906041 9906231 -240781623 - MIR3 SINE MIR -7 201 3 1235 179 0 5 chr2 9906415 9906627 -240781227 + AluJb SINE Alu 87 297 -15 418 154 39 62 chr2 9906630 9906707 -240781147 + Charlie5 DNA MER1_type 2494 2568 -56 2132 119 0 10 chr2 9906707 9907000 -240780854 - AluSx SINE Alu -22 290 1 418 154 39 62 chr2 9907000 9907052 -240780802 + Charlie5 DNA MER1_type 2568 2620 -4 1668 139 56 40 chr2 9907113 9907416 -240780438 - AluJo SINE Alu -4 308 1 207 228 254 18 chr2 9907418 9907532 -240780322 + MER5A DNA MER1_type 47 187 -2 * 511 208 10 0 chr2 9907440 9907536 -240780318 - MER5A DNA MER1_type -80 109 13 963 213 11 0 chr2 9907566 9907749 -240780105 - MER5A DNA MER1_type -4 185 1 753 272 117 29 chr2 9908011 9908353 -240779501 - L1M4 LINE L1 -2882 3264 2893 1328 171 0 9 chr2 9908356 9908567 -240779287 - AluJo SINE Alu -94 218 10 208 130 0 65 chr2 9908597 9908643 -240779211 + (TTTTTG)n Simple_repeat Simple_repeat 5 47 0 582 100 12 0 chr2 9908661 9908741 -240779113 + AluJ/FLAM SINE Alu 2 82 -230 1057 138 66 0 chr2 9908848 9909029 -240778825 + AluY SINE Alu 119 311 0 356 333 53 15 chr2 9909043 9909175 -240778679 - L1M4 LINE L1 -3372 2774 2638 2039 130 10 13 chr2 9909270 9909571 -240778283 - AluSx SINE Alu -12 300 1 186 354 80 18 chr2 9909705 9909818 -240778036 - MIR SINE MIR -71 137 18 496 268 89 94 chr2 9910262 9910636 -240777218 + L2 LINE L2 2312 2684 -630 1867 74 0 4 chr2 9910636 9910889 -240776965 + AluSp SINE Alu 57 308 0 496 268 89 94 chr2 9910889 9911140 -240776714 + L2 LINE L2 2684 2935 -379 2136 105 48 7 chr2 9911398 9911693 -240776161 + AluSx SINE Alu 1 307 -5 278 273 11 11 chr2 9911698 9911786 -240776068 - L1ME LINE L1 -476 5645 5558 267 242 11 21 chr2 9911856 9911951 -240775903 - L1ME LINE L1 -2379 5429 5336 2336 97 0 3 chr2 9912267 9912567 -240775287 - AluSx SINE Alu -13 299 1 200 189 38 19 chr2 9913264 9913317 -240774537 + MIR SINE MIR 85 138 -124 447 68 0 0 chr2 9913453 9913512 -240774342 + (TTCC)n Simple_repeat Simple_repeat 1 59 0 2037 118 4 0 chr2 9913512 9913784 -240774070 - AluSx SINE Alu -33 279 7 727 175 241 0 chr2 9914703 9914836 -240773018 - AluJo SINE Alu -18 294 194 195 69 0 0 chr2 9914836 9914865 -240772989 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 727 175 241 0 chr2 9914865 9914897 -240772957 - AluJo SINE Alu -118 194 89 1970 121 0 48 chr2 9915066 9915380 -240772474 + AluSg SINE Alu 1 299 -11 2253 113 17 0 chr2 9915383 9915683 -240772171 + AluSp SINE Alu 1 305 -8 1159 124 12 0 chr2 9915687 9915856 -240771998 + FRAM SINE Alu 1 170 -6 1200 204 98 14 chr2 9915857 9916284 -240771570 + L1ME3A LINE L1 5200 5667 -503 2380 110 0 0 chr2 9916287 9916595 -240771259 + AluSg SINE Alu 1 308 -2 816 164 8 8 chr2 9916635 9916763 -240771091 + FAM SINE Alu 6 133 -52 28 0 0 0 chr2 9916767 9916795 -240771059 + AT_rich Low_complexity Low_complexity 1 28 0 2203 126 7 3 chr2 9916806 9917116 -240770738 + AluSp SINE Alu 3 313 0 685 245 137 90 chr2 9917118 9917587 -240770267 + L1ME3A LINE L1 5652 6142 -28 2270 115 0 0 chr2 9917620 9917915 -240769939 - AluSq SINE Alu -18 295 1 1512 155 73 43 chr2 9917915 9918233 -240769621 - L1MC1 LINE L1 -8 6325 5995 2065 97 0 0 chr2 9918253 9918532 -240769322 - AluSx SINE Alu 0 301 23 219 319 43 77 chr2 9919108 9919230 -240768624 + L2 LINE L2 2891 3016 -297 2302 122 0 0 chr2 9919230 9919534 -240768320 + AluSq SINE Alu 1 304 -9 219 319 43 77 chr2 9919534 9919616 -240768238 + L2 LINE L2 3016 3099 -214 641 165 55 16 chr2 9919616 9919743 -240768111 - FLAM_C SINE Alu -1 132 1 219 319 43 77 chr2 9919743 9919913 -240767941 + L2 LINE L2 3099 3253 -60 1245 176 173 4 chr2 9920310 9920565 -240767289 + AluSx SINE Alu 1 298 -14 185 94 31 0 chr2 9921027 9921059 -240766795 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 2349 96 3 10 chr2 9922050 9922364 -240765490 + AluSx SINE Alu 1 312 0 2087 104 8 0 chr2 9922724 9922992 -240764862 + AluSx SINE Alu 22 291 -21 988 102 0 0 chr2 9923008 9923163 -240764691 + AluSg/x SINE Alu 157 311 0 379 257 95 0 chr2 9923244 9923349 -240764505 + MIR SINE MIR 32 146 -62 259 366 0 0 chr2 9923881 9923974 -240763880 - MIR SINE MIR -73 189 97 395 300 147 21 chr2 9925001 9925191 -240762663 + L1ME4a LINE L1 5880 6093 -28 2113 150 0 10 chr2 9925461 9925639 -240762215 - AluSx SINE Alu -1 311 136 2614 43 0 3 chr2 9925639 9925938 -240761916 - AluY SINE Alu -13 298 1 2113 150 0 10 chr2 9925938 9926073 -240761781 - AluSx SINE Alu -176 136 1 240 59 0 0 chr2 9926151 9926185 -240761669 + (GTTTG)n Simple_repeat Simple_repeat 5 38 0 2276 95 14 0 chr2 9926186 9926482 -240761372 - AluSp SINE Alu -12 301 2 367 285 39 31 chr2 9926683 9926813 -240761041 + MIR3 SINE MIR 15 145 -63 28 79 0 0 chr2 9928196 9928259 -240759595 + GC_rich Low_complexity Low_complexity 1 63 0 2548 59 3 3 chr2 9930089 9930392 -240757462 + AluY SINE Alu 1 303 -8 1497 77 0 0 chr2 9930413 9930594 -240757260 - AluSx SINE Alu -131 181 1 700 139 0 9 chr2 9931157 9931265 -240756589 + AluSq/x SINE Alu 27 133 -179 2194 103 7 3 chr2 9931269 9931569 -240756285 + AluSp SINE Alu 1 301 -12 568 204 10 0 chr2 9932403 9932506 -240755348 + FLAM_A SINE Alu 2 105 -37 309 109 0 0 chr2 9932506 9932552 -240755302 + (TCCC)n Simple_repeat Simple_repeat 1 46 0 2067 135 0 3 chr2 9932552 9932841 -240755013 - AluSx SINE Alu -24 288 1 1114 196 0 20 chr2 9932844 9933043 -240754811 + AluJo SINE Alu 105 299 -13 1619 117 0 22 chr2 9933087 9933317 -240754537 + AluSq SINE Alu 1 225 -88 494 189 42 0 chr2 9933417 9933512 -240754342 + AluSg/x SINE Alu 209 307 -3 476 61 122 0 chr2 9933517 9933615 -240754239 + GA-rich Low_complexity Low_complexity 4 113 0 243 279 177 0 chr2 9933696 9933775 -240754079 + MIR SINE MIR 58 150 -112 2069 229 49 20 chr2 9934197 9934805 -240753049 + L1ME2 LINE L1 5519 6144 -20 262 268 17 82 chr2 9934863 9935094 -240752760 + L1MC4 LINE L1 7826 8041 -1 2055 143 3 3 chr2 9935610 9935910 -240751944 - AluJb SINE Alu -12 300 1 2179 118 7 0 chr2 9936006 9936293 -240751561 - AluSg SINE Alu -21 289 1 1598 225 80 19 chr2 9936717 9937144 -240750710 + LTR40c LTR ERVL 1 453 -12 2381 75 20 10 chr2 9937207 9937502 -240750352 + AluSp SINE Alu 1 298 -15 792 189 0 0 chr2 9937510 9937642 -240750212 + FLAM_C SINE Alu 2 133 0 713 247 11 29 chr2 9938037 9938211 -240749643 - FRAM SINE Alu -7 169 1 1701 93 97 69 chr2 9938449 9938738 -240749116 + AluSg SINE Alu 1 297 -13 2178 253 127 45 chr2 9938909 9939002 -240748852 - L2 LINE L2 -4 3309 3225 1539 168 54 27 chr2 9939002 9939300 -240748554 + AluJb SINE Alu 1 306 -6 2178 253 127 45 chr2 9939300 9940269 -240747585 - L2 LINE L2 -88 3225 2164 287 315 130 0 chr2 9940276 9940384 -240747470 + L3 LINE CR1 989 1110 -467 1410 296 124 42 chr2 9940420 9940887 -240746967 + L2 LINE L2 1835 2262 -1051 1788 93 42 0 chr2 9940887 9941124 -240746730 + AluSc SINE Alu 1 247 -62 1410 296 124 42 chr2 9941124 9942012 -240745842 + L2 LINE L2 2262 3312 -1 496 299 132 37 chr2 9941999 9942324 -240745530 + L3 LINE CR1 1133 1488 -89 * 185 274 0 39 chr2 9942344 9942395 -240745459 + MIR SINE MIR 78 126 -82 255 339 156 0 chr2 9942527 9942636 -240745218 + L2 LINE L2 3177 3302 -11 2533 65 0 7 chr2 9943342 9943651 -240744203 + AluSx SINE Alu 1 307 -5 2502 81 0 0 chr2 9943864 9944171 -240743683 + AluSx SINE Alu 1 307 -5 181 255 20 20 chr2 9944540 9944591 -240743263 + L2 LINE L2 3248 3298 -15 1673 187 26 10 chr2 9944752 9945057 -240742797 + 7SLRNA srpRNA srpRNA 5 314 -6 945 226 88 9 chr2 9945057 9945274 -240742580 + MIR SINE MIR 22 255 -7 908 136 97 24 chr2 9945343 9945549 -240742305 - L1MB8 LINE L1 -1 6177 5957 825 205 58 0 chr2 9945578 9945734 -240742120 - AluJo SINE Alu -39 273 109 930 157 0 7 chr2 9945736 9945883 -240741971 - MER46A DNA MER2_type -90 146 1 384 115 4 4 chr2 9945885 9945941 -240741913 - MLT1A1 LTR MaLR -216 158 99 2377 97 0 3 chr2 9945941 9946251 -240741603 + AluSg SINE Alu 1 309 -1 2233 125 0 0 chr2 9946259 9946556 -240741298 + AluSq SINE Alu 1 297 -16 2135 105 0 74 chr2 9946556 9946880 -240740974 + AluSc SINE Alu 1 300 -9 300 259 56 37 chr2 9946975 9947083 -240740771 + MIR SINE MIR 151 260 -2 1516 168 7 45 chr2 9947376 9947504 -240740350 + AluJo SINE Alu 13 144 -168 2228 102 13 7 chr2 9947504 9947834 -240740020 + AluSq SINE Alu 1 332 0 1516 168 7 45 chr2 9947834 9947995 -240739859 + AluJo SINE Alu 144 293 -19 327 103 17 35 chr2 9947995 9948053 -240739801 + U7 snRNA snRNA 7 63 0 235 307 11 23 chr2 9948064 9948152 -240739702 - L1ME LINE L1 -527 5594 5508 2529 77 0 6 chr2 9948461 9948772 -240739082 - AluSc SINE Alu 0 309 1 2199 108 30 7 chr2 9948836 9949141 -240738713 - AluSq SINE Alu -1 312 1 1980 180 33 19 chr2 9949147 9949162 -240738692 - L1MB3 LINE L1 -37 6146 6133 2057 110 50 0 chr2 9949162 9949444 -240738410 - AluSx SINE Alu -16 296 1 1980 180 33 19 chr2 9949444 9949851 -240738003 - L1MB3 LINE L1 -50 6133 5718 1722 121 0 0 chr2 9949879 9950103 -240737751 - AluSx SINE Alu -88 224 1 2090 139 3 3 chr2 9950130 9950513 -240737341 - AluSc SINE Alu 0 383 1 1596 241 53 80 chr2 9950731 9950790 -240737064 - L1MC4 LINE L1 -2 8040 7981 2339 113 3 0 chr2 9950790 9951100 -240736754 + AluSp SINE Alu 1 311 -2 1596 241 53 80 chr2 9951100 9951382 -240736472 - L1MC4 LINE L1 -61 7981 7693 771 187 0 22 chr2 9951382 9951516 -240736338 + FLAM_A SINE Alu 1 131 -2 1596 241 53 80 chr2 9951516 9951653 -240736201 - L1MC4 LINE L1 -349 7693 7554 1859 124 3 107 chr2 9951653 9951999 -240735855 - AluY SINE Alu -1 310 1 1596 241 53 80 chr2 9951999 9952232 -240735622 - L1MC4 LINE L1 -488 7554 7346 392 159 62 53 chr2 9952242 9952355 -240735499 - L1ME2 LINE L1 0 6164 6051 191 347 92 10 chr2 9952514 9952612 -240735242 + MIR SINE MIR 45 150 -58 2303 111 3 3 chr2 9952651 9952957 -240734897 + AluSq SINE Alu 1 306 -7 25 51 0 0 chr2 9952975 9953014 -240734840 + AT_rich Low_complexity Low_complexity 1 39 0 880 156 0 0 chr2 9953016 9953144 -240734710 + FLAM_C SINE Alu 1 128 -5 816 248 64 67 chr2 9953164 9953507 -240734347 + L1ME4a LINE L1 5311 5652 -469 396 316 158 34 chr2 9953576 9953842 -240734012 + L1ME4a LINE L1 5634 5906 -215 2104 141 3 0 chr2 9954044 9954349 -240733505 + AluJb SINE Alu 7 312 0 345 218 64 0 chr2 9954462 9954540 -240733314 - L2 LINE L2 0 3272 3190 304 253 181 0 chr2 9954630 9954713 -240733141 + L2 LINE L2 3189 3286 -27 189 245 0 57 chr2 9954761 9954814 -240733040 + L2 LINE L2 3263 3312 -1 236 240 125 60 chr2 9954829 9955029 -240732825 - LTR33 LTR ERVL -6 515 303 220 161 57 218 chr2 9955183 9955307 -240732547 - MIR SINE MIR -86 176 73 405 248 110 9 chr2 9955460 9955569 -240732285 + MIR SINE MIR 93 212 -50 898 143 0 0 chr2 9955629 9955755 -240732099 + AluJ SINE Alu 1 126 -176 684 183 8 38 chr2 9955763 9955894 -240731960 + AluJ SINE Alu 183 309 -3 275 293 63 103 chr2 9956421 9956517 -240731337 - MIR SINE MIR -75 187 100 2374 115 0 0 chr2 9956517 9956829 -240731025 + AluSx SINE Alu 1 312 0 275 293 63 103 chr2 9956829 9956906 -240730948 - MIR SINE MIR -162 100 21 906 271 35 48 chr2 9957033 9957336 -240730518 - L1ME4a LINE L1 -208 5913 5615 2323 73 3 20 chr2 9957336 9957637 -240730217 - AluSc SINE Alu -13 296 1 906 271 35 48 chr2 9957637 9957731 -240730123 - L1ME4a LINE L1 -506 5615 5521 2184 127 10 0 chr2 9958022 9958329 -240729525 - AluSx SINE Alu -2 310 1 2198 74 7 21 chr2 9958346 9958680 -240729174 - AluY SINE Alu 0 330 1 1484 161 48 48 chr2 9958688 9958832 -240729022 - AluJo SINE Alu -21 291 148 2154 85 3 62 chr2 9958832 9959139 -240728715 - AluSp SINE Alu -24 289 1 1484 161 48 48 chr2 9959139 9959285 -240728569 - AluJo SINE Alu -163 149 1 2218 110 0 13 chr2 9959884 9960185 -240727669 + AluSx SINE Alu 7 303 -9 924 152 226 17 chr2 9960188 9960243 -240727611 + Tigger3(Golem) DNA MER2_type 2761 2803 -235 2180 100 11 0 chr2 9960243 9960545 -240727309 + AluSq SINE Alu 2 306 0 924 152 226 17 chr2 9960545 9960718 -240727136 + Tigger3(Golem) DNA MER2_type 2803 3038 0 21 82 0 0 chr2 9960731 9960780 -240727074 + AT_rich Low_complexity Low_complexity 1 49 0 1359 233 10 0 chr2 9960808 9961117 -240726737 - AluSq SINE Alu -1 312 1 2242 99 13 0 chr2 9961261 9961564 -240726290 - AluSx SINE Alu -5 307 1 729 183 0 0 chr2 9962731 9962851 -240725003 + FAM SINE Alu 40 159 -26 234 0 0 0 chr2 9962851 9962877 -240724977 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2193 104 7 19 chr2 9962909 9963217 -240724637 - AluSc SINE Alu -5 304 1 336 70 0 0 chr2 9963946 9963989 -240723865 + Alu SINE Alu 1 43 -259 331 330 26 9 chr2 9964084 9964199 -240723655 - MIR SINE MIR -144 118 2 204 111 0 0 chr2 9964266 9964302 -240723552 + (T)n Simple_repeat Simple_repeat 1 36 0 23 33 0 0 chr2 9964303 9964333 -240723521 + AT_rich Low_complexity Low_complexity 1 30 0 2043 102 17 3 chr2 9964342 9964636 -240723218 + AluSx SINE Alu 1 298 -14 196 309 186 0 chr2 9964842 9964939 -240722915 - L2 LINE L2 -14 3258 3144 345 264 44 0 chr2 9965209 9965300 -240722554 - L2 LINE L2 -17 3255 3161 568 215 164 94 chr2 9965794 9966050 -240721804 - MLT1B LTR MaLR 0 390 117 222 159 23 0 chr2 9966314 9966358 -240721496 + MIR SINE MIR 111 155 -107 2208 101 0 0 chr2 9966382 9966678 -240721176 - AluSg SINE Alu -13 297 2 2089 104 0 23 chr2 9968922 9969221 -240718633 + AluSg SINE Alu 1 292 -18 368 288 16 76 chr2 9970560 9970734 -240717120 - MIR SINE MIR -40 168 2 21 36 0 0 chr2 9970827 9970855 -240716999 + AT_rich Low_complexity Low_complexity 1 28 0 312 173 0 0 chr2 9970857 9970909 -240716945 + L1MD2 LINE L1 6183 6234 -125 323 209 0 114 chr2 9970914 9971115 -240716739 + (TATAG)n Simple_repeat Simple_repeat 3 180 0 456 192 48 0 chr2 9971163 9971267 -240716587 + L1MD2 LINE L1 6251 6359 0 21 0 0 0 chr2 9971357 9971378 -240716476 + AT_rich Low_complexity Low_complexity 1 21 0 1875 153 0 7 chr2 9971381 9971682 -240716172 - AluSx SINE Alu 0 312 14 2193 113 0 0 chr2 9971689 9971990 -240715864 - AluSx SINE Alu -11 301 1 57 61 0 0 chr2 9971994 9972093 -240715761 + AT_rich Low_complexity Low_complexity 1 99 0 263 277 45 45 chr2 9972280 9972392 -240715462 + MER63 DNA MER1_type 682 793 -268 209 318 238 14 chr2 9973432 9973655 -240714199 + L3 LINE CR1 1200 1472 -105 2013 132 13 0 chr2 9973655 9973959 -240713895 + AluSx SINE Alu 1 308 -4 2187 96 3 0 chr2 9974349 9974641 -240713213 + AluSp SINE Alu 1 293 -20 229 294 47 35 chr2 9975053 9975138 -240712716 - L2 LINE L2 -33 3239 3154 339 225 232 0 chr2 9976373 9976511 -240711343 - MIR SINE MIR -12 250 81 2153 115 0 0 chr2 9977617 9977912 -240709942 - AluSx SINE Alu -17 295 1 200 242 116 32 chr2 9979539 9979634 -240708220 - MIR SINE MIR -52 210 108 201 213 0 0 chr2 9980496 9980543 -240707311 + (TG)n Simple_repeat Simple_repeat 1 47 0 1832 115 17 20 chr2 9982453 9982748 -240705106 - AluSq SINE Alu -14 299 6 2041 121 3 16 chr2 9985278 9985591 -240702263 - AluSq SINE Alu -4 309 1 282 56 0 0 chr2 9985611 9985647 -240702207 + (TA)n Simple_repeat Simple_repeat 2 37 0 1549 111 9 0 chr2 9985664 9985890 -240701964 + AluSq SINE Alu 79 306 -7 2189 81 7 7 chr2 9986932 9987227 -240700627 - AluSx SINE Alu -16 296 2 1090 100 0 19 chr2 9987507 9987667 -240700187 + AluSg/x SINE Alu 130 286 -24 1215 101 0 17 chr2 9988021 9988199 -240699655 + AluSg/x SINE Alu 130 304 -6 1024 121 54 24 chr2 9989139 9989246 -240698608 + AluSx SINE Alu 21 136 -176 2264 103 0 10 chr2 9989246 9989556 -240698298 + AluSc SINE Alu 1 307 -2 1024 121 54 24 chr2 9989556 9989614 -240698240 + AluSx SINE Alu 136 191 -121 1574 156 48 4 chr2 9992418 9992688 -240695166 - AluSx SINE Alu -18 294 13 638 87 109 0 chr2 9992788 9992880 -240694974 + AluSx SINE Alu 181 282 -30 253 208 0 0 chr2 9993530 9993578 -240694276 - MER91 DNA MER1_type 0 190 143 2210 115 0 3 chr2 9994350 9994663 -240693191 + AluSx SINE Alu 1 312 0 1411 98 0 5 chr2 9994940 9995134 -240692720 + AluSq SINE Alu 1 193 -120 194 260 40 0 chr2 9995788 9995838 -240692016 + MIR SINE MIR 31 82 -180 495 213 125 7 chr2 9995894 9995975 -240691879 + MIR SINE MIR 111 181 -81 231 61 0 0 chr2 9995975 9996008 -240691846 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 495 213 125 7 chr2 9996008 9996062 -240691792 + MIR SINE MIR 181 262 0 1967 117 32 0 chr2 9996548 9996831 -240691023 - AluSx SINE Alu -12 300 9 1404 159 13 0 chr2 9997418 9997657 -240690197 - AluJb SINE Alu -13 299 58 1696 178 0 7 chr2 9997704 9998013 -240689841 - AluSx SINE Alu 0 307 1 762 151 0 0 chr2 9999970 10000089 -240687765 - AluSx SINE Alu 0 310 192 1060 113 0 0 chr2 10000090 10000231 -240687623 - AluSx SINE Alu -171 141 1 1750 127 7 7 chr2 10000721 10000996 -240686858 + AluSx SINE Alu 9 283 -29 23 33 0 0 chr2 10001335 10001365 -240686489 + GC_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 10001570 10001596 -240686258 + GC_rich Low_complexity Low_complexity 1 26 0 257 254 55 55 chr2 10002135 10002245 -240685609 + MER69 DNA AcHobo 32 141 -2385 700 177 8 0 chr2 10002263 10002387 -240685467 - FRAM SINE Alu -54 122 1 1405 108 0 0 chr2 10002395 10002589 -240685265 - AluSp SINE Alu -13 300 107 1470 103 0 0 chr2 10002589 10002784 -240685070 - AluSp SINE Alu -118 195 1 282 222 48 0 chr2 10002785 10002848 -240685006 + MER69 DNA AcHobo 132 197 -1029 180 225 0 0 chr2 10002965 10003005 -240684849 - L2 LINE L2 -227 3045 3006 1289 171 3 71 chr2 10004187 10004244 -240683610 - L1MB4 LINE L1 0 6180 6121 371 150 17 0 chr2 10004244 10004304 -240683550 - U7 snRNA snRNA 0 63 3 2142 98 10 3 chr2 10004308 10004604 -240683250 - AluSx SINE Alu -14 298 1 1289 171 3 71 chr2 10004604 10004831 -240683023 - L1MB4 LINE L1 -62 6118 5911 2194 99 3 13 chr2 10004831 10005145 -240682709 - AluSq SINE Alu -2 311 1 1289 171 3 71 chr2 10005145 10005163 -240682691 - L1MB4 LINE L1 -269 5911 5893 435 289 4 83 chr2 10005192 10005458 -240682396 - L1MC4 LINE L1 -371 7671 7427 265 272 102 39 chr2 10006463 10006669 -240681185 + MLT1J1 LTR MaLR 228 446 0 2260 174 33 8 chr2 10006883 10006926 -240680928 - L1MB3 LINE L1 -12 6159 6119 1838 140 7 20 chr2 10006926 10007226 -240680628 - AluJb SINE Alu -16 296 1 2260 174 33 8 chr2 10007226 10007241 -240680613 - L1MB3 LINE L1 -52 6119 6106 1888 126 7 11 chr2 10007241 10007582 -240680272 - AluSp SINE Alu 0 340 1 2260 174 33 8 chr2 10007582 10007996 -240679858 - L1MB3 LINE L1 -65 6106 5711 1779 219 82 13 chr2 10008255 10008706 -240679148 + LTR65 LTR ERV1 167 648 -21 294 284 42 21 chr2 10008723 10008818 -240679036 - MIR SINE MIR -60 202 106 1507 243 43 102 chr2 10008828 10009478 -240678376 - LTR9 LTR ERV1 0 612 1 479 259 98 51 chr2 10009490 10009726 -240678128 - MLT1G1 LTR MaLR -163 432 186 270 263 25 12 chr2 10009753 10009833 -240678021 - MLT1G1 LTR MaLR -500 90 10 240 353 111 24 chr2 10009848 10010137 -240677717 + L2 LINE L2 2959 3272 0 1903 158 3 0 chr2 10010391 10010683 -240677171 - AluJb SINE Alu -19 293 1 22 0 0 0 chr2 10010694 10010716 -240677138 + AT_rich Low_complexity Low_complexity 1 22 0 1883 138 25 0 chr2 10010716 10010998 -240676856 - AluJb SINE Alu -23 289 1 207 0 0 0 chr2 10011008 10011031 -240676823 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2335 62 0 0 chr2 10011033 10011321 -240676533 - AluY SINE Alu -23 288 1 366 299 120 37 chr2 10012230 10012447 -240675407 + L2 LINE L2 2396 2630 -684 1063 323 41 31 chr2 10012471 10012889 -240674965 + LTR16A LTR ERVL 1 422 -28 370 358 74 6 chr2 10012923 10013085 -240674769 + LTR16A LTR ERVL 16 188 -262 251 231 0 0 chr2 10013181 10013233 -240674621 + MLT1K LTR MaLR 177 228 -360 470 315 165 9 chr2 10013263 10013584 -240674270 + MLT1K LTR MaLR 184 554 -34 2915 127 36 18 chr2 10013615 10014116 -240673738 + MLT2A1 LTR ERVL 1 519 -1 3392 185 28 6 chr2 10014218 10015071 -240672783 + L1MB8 LINE L1 5117 5992 -186 534 132 0 97 chr2 10015080 10015128 -240672726 + L1MB8 LINE L1 6073 6105 -73 2265 103 10 0 chr2 10015128 10015419 -240672435 - AluSq SINE Alu -19 294 1 534 132 0 97 chr2 10015419 10015484 -240672370 + L1MB8 LINE L1 6105 6175 -3 409 274 207 58 chr2 10015488 10015839 -240672015 + L2 LINE L2 2735 3189 -124 2176 117 3 0 chr2 10015839 10016122 -240671732 - AluSx SINE Alu -28 284 1 409 274 207 58 chr2 10016122 10016263 -240671591 + L2 LINE L2 3189 3308 -5 2247 129 0 0 chr2 10016301 10016596 -240671258 + AluSx SINE Alu 1 295 -17 22 0 0 0 chr2 10016657 10016679 -240671175 + AT_rich Low_complexity Low_complexity 1 22 0 1814 143 26 32 chr2 10016695 10017037 -240670817 - L1MC1 LINE L1 -6 6327 5988 230 269 19 0 chr2 10018403 10018455 -240669399 + L2 LINE L2 2577 2629 -685 269 132 0 19 chr2 10018468 10018521 -240669333 - L1MA3 LINE L1 0 6305 6254 303 276 198 39 chr2 10018760 10019043 -240668811 + L2 LINE L2 2944 3271 -1 184 204 41 0 chr2 10020662 10020711 -240667143 - L2 LINE L2 -37 3235 3185 611 63 0 0 chr2 10020720 10020799 -240667055 + AluJ/FRAM SINE Alu 227 305 -7 417 265 10 10 chr2 10020806 10020904 -240666950 - L2 LINE L2 -4 3309 3212 550 270 74 14 chr2 10020922 10021137 -240666717 + L1ME3A LINE L1 5610 5837 -333 546 91 0 0 chr2 10023458 10023535 -240664319 + (TTCC)n Simple_repeat Simple_repeat 1 77 0 2193 107 10 3 chr2 10023536 10023826 -240664028 - AluSx SINE Alu -19 293 2 2297 88 3 7 chr2 10024529 10024825 -240663029 + AluSx SINE Alu 1 295 -17 763 178 0 0 chr2 10025115 10025271 -240662583 - FLAM_C SINE Alu 0 157 2 661 199 125 18 chr2 10025310 10025528 -240662326 - L1MB7 LINE L1 0 6168 5933 576 256 63 49 chr2 10026253 10026476 -240661378 - MIR SINE MIR -13 249 24 234 0 0 0 chr2 10026658 10026684 -240661170 + (TG)n Simple_repeat Simple_repeat 1 26 0 354 232 152 56 chr2 10027064 10027189 -240660665 - L2 LINE L2 0 3313 3177 1640 184 122 6 chr2 10027992 10028319 -240659535 - MLT1A1 LTR MaLR 0 365 1 195 294 0 0 chr2 10028736 10028787 -240659067 - MIR SINE MIR -6 256 206 291 238 159 72 chr2 10029462 10029565 -240658289 - LTR50 LTR ERVL 0 795 702 1207 207 194 20 chr2 10029565 10029961 -240657893 + MLT1C LTR MaLR 1 465 -2 291 238 159 72 chr2 10029961 10030147 -240657707 - LTR50 LTR ERVL -93 702 481 198 0 0 0 chr2 10030237 10030259 -240657595 + (GA)n Simple_repeat Simple_repeat 2 23 0 670 186 22 71 chr2 10030396 10030579 -240657275 - LTR41 LTR ERVL -599 174 1 247 348 160 8 chr2 10030769 10030894 -240656960 - MIR SINE MIR -71 137 11 548 252 39 32 chr2 10031647 10031703 -240656151 - MIR SINE MIR -7 255 201 2246 119 0 10 chr2 10031703 10032015 -240655839 - AluSq SINE Alu -4 309 1 548 252 39 32 chr2 10032015 10032113 -240655741 - MIR SINE MIR -61 201 100 185 0 0 39 chr2 10032585 10032611 -240655243 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 224 279 44 15 chr2 10032696 10032764 -240655090 - MIR SINE MIR -171 91 22 331 271 44 117 chr2 10033008 10033325 -240654529 - L2 LINE L2 -346 2968 2675 2239 120 0 0 chr2 10033490 10033791 -240654063 - AluSx SINE Alu -11 301 1 769 276 113 16 chr2 10033848 10034226 -240653628 - L1MC4a LINE L1 -296 5825 5524 317 198 22 0 chr2 10034688 10034779 -240653075 - MER96 DNA MER1_type? -82 93 1 181 276 58 11 chr2 10036871 10036958 -240650896 - MIR3 SINE MIR -103 105 15 220 231 77 77 chr2 10037142 10037220 -240650634 - MIR SINE MIR -16 246 169 298 268 99 42 chr2 10037703 10037845 -240650009 + MIR SINE MIR 47 196 -66 2396 117 120 5 chr2 10037985 10038369 -240649485 - MSTA LTR MaLR 0 428 1 441 134 0 37 chr2 10038369 10038451 -240649403 - MSTA-int LTR MaLR 0 1580 1502 2270 102 0 0 chr2 10038451 10038744 -240649110 - AluSx SINE Alu -19 293 1 533 237 10 110 chr2 10038796 10038873 -240648981 + MER34 LTR ERV1 281 364 -178 4590 97 4 39 chr2 10038873 10039276 -240648578 + MER4A LTR ERV1 1 416 -248 1971 164 0 3 chr2 10039276 10039587 -240648267 + AluJb SINE Alu 1 310 -2 4590 97 4 39 chr2 10039587 10039730 -240648124 + MER4A LTR ERV1 416 521 -143 2323 101 0 7 chr2 10039730 10040026 -240647828 + AluSx SINE Alu 1 294 -18 4590 97 4 39 chr2 10040026 10040166 -240647688 + MER4A LTR ERV1 521 664 0 533 237 10 110 chr2 10040166 10040379 -240647475 + MER34 LTR ERV1 364 542 0 1609 175 26 0 chr2 10040379 10040682 -240647172 - L1MB3 LINE L1 -74 6109 5799 336 200 100 12 chr2 10040682 10040762 -240647092 + MER21B LTR ERV1 1 87 -776 2764 256 46 8 chr2 10040786 10041544 -240646310 + MER21B LTR ERV1 19 805 -58 2509 162 11 62 chr2 10041570 10042127 -240645727 - L1MB3 LINE L1 -371 5812 5287 2353 93 7 0 chr2 10042758 10043060 -240644794 - AluSp SINE Alu -9 304 1 820 233 112 43 chr2 10043205 10043579 -240644275 + MER110A LTR ERV1 39 438 -30 448 228 81 47 chr2 10044351 10044500 -240643354 + MIR SINE MIR 20 173 -89 493 205 0 0 chr2 10046213 10046296 -240641558 - AluJ/FLAM SINE Alu -228 84 2 2436 87 0 0 chr2 10046363 10046662 -240641192 + AluSg SINE Alu 1 299 -11 618 227 28 0 chr2 10046895 10047036 -240640818 - MER58A DNA MER1_type -44 180 36 215 297 72 45 chr2 10047261 10047372 -240640482 - MIR SINE MIR -30 232 119 2476 58 27 0 chr2 10047777 10048069 -240639785 - AluY SINE Alu -11 300 1 819 168 0 0 chr2 10048117 10048242 -240639612 + FLAM_A SINE Alu 18 142 0 203 252 107 48 chr2 10048611 10048714 -240639140 - MIR SINE MIR -59 203 95 2242 119 3 3 chr2 10049619 10049931 -240637923 + AluSx SINE Alu 1 312 0 2015 116 38 20 chr2 10050013 10050306 -240637548 + AluSx SINE Alu 1 298 -14 184 308 221 29 chr2 10050435 10050539 -240637315 + MER5A DNA MER1_type 65 188 -1 * 193 222 44 0 chr2 10050539 10050581 -240637273 - MIR3 SINE MIR -52 156 113 203 268 18 0 chr2 10050725 10050781 -240637073 + GA-rich Low_complexity Low_complexity 4 60 0 274 215 118 0 chr2 10050887 10050989 -240636865 - L1ME LINE L1 -306 5856 5743 373 253 120 19 chr2 10051044 10051202 -240636652 - MIR SINE MIR -27 235 62 204 97 0 0 chr2 10051620 10051651 -240636203 + (A)n Simple_repeat Simple_repeat 1 31 0 1132 224 88 58 chr2 10051689 10051935 -240635919 + Charlie4a DNA MER1_type 37 274 -1687 1391 171 0 0 chr2 10051935 10052169 -240635685 + MER46A DNA MER2_type 3 236 0 1132 224 88 58 chr2 10052169 10052297 -240635557 + Charlie4a DNA MER1_type 274 430 -1531 1612 185 9 64 chr2 10052297 10052627 -240635227 - AluJb SINE Alu 0 312 1 1132 224 88 58 chr2 10052627 10052703 -240635151 + Charlie4a DNA MER1_type 430 502 -6 1810 167 11 0 chr2 10052719 10053001 -240634853 + AluJb SINE Alu 7 291 -21 314 304 80 9 chr2 10054604 10054716 -240633138 - MIR SINE MIR -38 224 105 187 150 25 25 chr2 10054826 10054866 -240632988 + L2 LINE L2 3176 3215 -98 2478 80 3 0 chr2 10054873 10055173 -240632681 - AluSp SINE Alu -12 301 1 383 200 12 0 chr2 10055486 10055566 -240632288 + Tigger3(Golem) DNA MER2_type 28 108 -2921 * 506 131 39 108 chr2 10055558 10055620 -240632234 + Tigger3(Golem) DNA MER2_type 2279 2329 -700 2581 62 0 0 chr2 10055620 10055924 -240631930 - AluY SINE Alu -7 304 1 506 131 39 108 chr2 10055924 10055991 -240631863 + Tigger3(Golem) DNA MER2_type 2329 2399 -630 6021 25 5 0 chr2 10055992 10056739 -240631115 - L1P LINE L1 -1097 5049 4299 7451 15 42 0 chr2 10056739 10057754 -240630100 + L1PA2 LINE L1 5104 6155 0 454 132 49 56 chr2 10057756 10057802 -240630052 + Tigger3(Golem) DNA MER2_type 2381 2426 -603 1951 130 23 23 chr2 10057802 10058109 -240629745 + AluJo SINE Alu 1 307 -5 454 132 49 56 chr2 10058109 10058206 -240629648 + Tigger3(Golem) DNA MER2_type 2426 2523 -506 640 199 7 41 chr2 10058212 10058358 -240629496 + FLAM_C SINE Alu 3 143 0 229 135 19 0 chr2 10058359 10058411 -240629443 + Tigger3(Golem) DNA MER2_type 2515 2567 -462 1616 142 45 7 chr2 10058416 10058704 -240629150 + Tigger3(Golem) DNA MER2_type 2683 2981 -48 1638 148 79 11 chr2 10058928 10059206 -240628648 - AluJo SINE Alu -15 297 1 226 286 0 0 chr2 10059246 10059316 -240628538 - L1M4 LINE L1 -2225 3921 3852 216 293 157 36 chr2 10059515 10059655 -240628199 - MIR SINE MIR -42 220 64 276 281 47 47 chr2 10059798 10059926 -240627928 - L2 LINE L2 -523 2791 2664 224 274 271 31 chr2 10059986 10060344 -240627510 - L2 LINE L2 -1343 1971 1528 961 162 203 22 chr2 10060433 10060542 -240627312 + MER33 DNA MER1_type 5 93 -2492 2071 102 60 0 chr2 10060542 10060825 -240627029 - AluSx SINE Alu -12 300 1 961 162 203 22 chr2 10060825 10060986 -240626868 + MER33 DNA MER1_type 93 324 0 1200 137 188 74 chr2 10061111 10061382 -240626472 + AluJb SINE Alu 1 302 0 545 297 120 0 chr2 10061832 10062007 -240625847 - MIR SINE MIR -28 234 39 1372 187 126 0 chr2 10062965 10063227 -240624627 + AluJo SINE Alu 2 296 -6 520 160 36 75 chr2 10063227 10063395 -240624459 - MIR SINE MIR -60 202 47 2247 76 21 7 chr2 10063635 10063926 -240623928 - AluSp SINE Alu -18 295 1 23 33 0 0 chr2 10064292 10064322 -240623532 + GC_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 10064527 10064553 -240623301 + GC_rich Low_complexity Low_complexity 1 26 0 291 198 83 62 chr2 10065061 10065157 -240622697 + MIR SINE MIR 89 186 -76 2162 124 3 7 chr2 10065157 10065463 -240622391 + AluSq SINE Alu 1 305 -8 306 264 100 27 chr2 10065475 10065585 -240622269 + L1MCa LINE L1 1431 1548 -4878 209 227 0 27 chr2 10065580 10065655 -240622199 + CT-rich Low_complexity Low_complexity 3 75 0 * 181 0 0 0 chr2 10065727 10065747 -240622107 + (TTTTG)n Simple_repeat Simple_repeat 2 180 0 2073 105 0 44 chr2 10065747 10066043 -240621811 - AluSx SINE Alu -1 302 1 923 130 0 15 chr2 10066063 10066194 -240621660 - AluJb SINE Alu -183 129 1 1053 309 55 28 chr2 10066199 10067023 -240620831 - L1M4 LINE L1 -964 5182 4337 817 142 0 17 chr2 10067053 10067173 -240620681 - FLAM_C SINE Alu -25 118 1 634 208 0 0 chr2 10067221 10067327 -240620527 + AluJb SINE Alu 190 295 -17 714 239 95 104 chr2 10067352 10067775 -240620079 + L1ME3A LINE L1 5533 5951 -219 2485 204 29 18 chr2 10068119 10068663 -240619191 + MER44D DNA MER2_type 1 605 0 320 307 112 13 chr2 10069207 10069384 -240618470 - MIR SINE MIR -56 152 3 539 246 119 42 chr2 10069507 10069743 -240618111 + MLT1L LTR MaLR 42 295 -320 238 244 87 61 chr2 10070285 10070400 -240617454 + MLT1L LTR MaLR 178 295 -320 860 260 132 3 chr2 10072501 10072828 -240615026 - MLT1B LTR MaLR -1 389 21 252 254 0 0 chr2 10073290 10073345 -240614509 + (TG)n Simple_repeat Simple_repeat 1 55 0 347 345 62 7 chr2 10075395 10075540 -240612314 + MIR3 SINE MIR 41 193 -15 413 297 22 7 chr2 10075589 10075740 -240612114 + MIR SINE MIR 37 188 -57 687 291 23 0 chr2 10075912 10076087 -240611767 + MER91A DNA MER1_type 1 179 -17 276 278 0 0 chr2 10076139 10076193 -240611661 + MER91A DNA MER1_type 134 187 -3 452 320 88 24 chr2 10076599 10076930 -240610924 - LTR16A LTR ERVL 0 450 99 23 0 0 0 chr2 10077003 10077026 -240610828 + AT_rich Low_complexity Low_complexity 1 23 0 252 211 74 42 chr2 10078226 10078321 -240609533 - MIR SINE MIR -95 113 16 1184 201 132 3 chr2 10078674 10078977 -240608877 + L1MC1 LINE L1 5992 6333 0 326 287 80 0 chr2 10078996 10079146 -240608708 - MER112 DNA MER1_type -11 249 88 193 184 0 0 chr2 10079192 10079230 -240608624 - MIR SINE MIR -125 137 100 193 177 51 165 chr2 10079564 10079623 -240608231 - L2 LINE L2 0 3313 3264 186 43 0 0 chr2 10079623 10079646 -240608208 + (CA)n Simple_repeat Simple_repeat 1 23 0 193 177 51 165 chr2 10079646 10079665 -240608189 - L2 LINE L2 -49 3264 3244 1680 242 82 11 chr2 10080030 10080554 -240607300 - MER74B LTR ERVL -59 563 3 2022 190 73 7 chr2 10081347 10081784 -240606070 + MLT1C LTR MaLR 2 467 0 2073 113 3 7 chr2 10081807 10082100 -240605754 - AluSg SINE Alu -14 296 5 267 159 0 0 chr2 10082100 10082144 -240605710 - Alu SINE Alu -255 44 1 197 304 0 36 chr2 10082152 10082208 -240605646 + MIR SINE MIR 105 152 -56 215 383 12 0 chr2 10082568 10082649 -240605205 - L2 LINE L2 -31 3241 3160 448 274 20 26 chr2 10082774 10082927 -240604927 + MER3 DNA MER1_type 1 152 -57 1256 199 78 57 chr2 10082928 10083217 -240604637 - L1MB8 LINE L1 -9 6169 5887 198 0 0 0 chr2 10083217 10083239 -240604615 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2040 110 32 0 chr2 10083240 10083521 -240604333 - AluSx SINE Alu -22 290 1 1256 199 78 57 chr2 10083521 10083616 -240604238 - L1MB8 LINE L1 -290 5888 5775 29 0 0 0 chr2 10085589 10085618 -240602236 + AT_rich Low_complexity Low_complexity 1 29 0 2345 83 7 0 chr2 10085746 10086046 -240601808 - AluSg SINE Alu -7 303 2 488 285 107 47 chr2 10086286 10086669 -240601185 - MLT1K LTR MaLR -40 548 143 2313 102 57 25 chr2 10086696 10087049 -240600805 + THE1B LTR MaLR 1 364 0 462 264 51 13 chr2 10087458 10087617 -240600237 - MIR SINE MIR -56 152 38 385 309 40 0 chr2 10087738 10087864 -240599990 + L3 LINE CR1 1419 1549 -28 2081 218 78 18 chr2 10088385 10089010 -240598844 - L1MB8 LINE L1 -751 5395 4733 1141 223 14 44 chr2 10089013 10089377 -240598477 - L1MB8 LINE L1 -2391 3755 3403 328 333 51 17 chr2 10089438 10089555 -240598299 + L2 LINE L2 3146 3266 -6 414 294 138 33 chr2 10089680 10090071 -240597783 + L1MC/D LINE L1 5349 5780 -2028 2061 199 185 16 chr2 10090208 10090766 -240597088 + MLT1E1 LTR MaLR 1 652 -2 240 267 19 57 chr2 10091371 10091476 -240596378 - MIR SINE MIR -54 208 108 234 243 27 0 chr2 10091663 10091737 -240596117 + G-rich Low_complexity Low_complexity 5 80 0 5423 34 2 0 chr2 10091811 10092403 -240595451 - SVA Other Other 0 1386 794 1864 164 3 26 chr2 10093047 10093359 -240594495 + AluJb SINE Alu 5 309 -3 321 100 0 0 chr2 10093359 10093409 -240594445 + (CA)n Simple_repeat Simple_repeat 2 51 0 1093 240 75 9 chr2 10093440 10093773 -240594081 - MER90 LTR ERV1 -1 613 259 490 319 43 11 chr2 10094974 10095162 -240592692 + MIR SINE MIR 16 209 -53 194 345 35 26 chr2 10095202 10095315 -240592539 + L3 LINE CR1 1109 1222 -355 1146 244 47 22 chr2 10096267 10096454 -240591400 - MLT1B LTR MaLR -17 373 192 2212 85 52 36 chr2 10096454 10096760 -240591094 - AluSx SINE Alu -1 311 1 1146 244 47 22 chr2 10096760 10096936 -240590918 - MLT1B LTR MaLR -198 192 1 571 281 45 11 chr2 10096961 10097182 -240590672 + MIR SINE MIR 17 244 -18 293 368 105 13 chr2 10097518 10097670 -240590184 - L2 LINE L2 -14 3258 3093 210 231 0 0 chr2 10097740 10097792 -240590062 - MIR SINE MIR -91 117 66 192 338 22 37 chr2 10098710 10098846 -240589008 + MIR3 SINE MIR 30 163 -45 411 325 110 0 chr2 10098889 10099043 -240588811 + MIR SINE MIR 35 205 -57 1525 237 47 24 chr2 10099093 10099545 -240588309 + MLT1C LTR MaLR 6 467 0 713 271 22 118 chr2 10100025 10100745 -240587109 - L1M4 LINE L1 -4012 3126 2476 189 0 0 0 chr2 10101018 10101039 -240586815 + (A)n Simple_repeat Simple_repeat 1 21 0 2086 116 0 0 chr2 10101046 10101313 -240586541 - AluSg SINE Alu -43 267 1 2534 196 84 55 chr2 10101321 10102566 -240585288 - L1M4 LINE L1 -4532 2425 961 301 275 9 37 chr2 10102585 10102694 -240585160 - L2 LINE L2 0 3272 3167 216 0 0 0 chr2 10103080 10103104 -240584750 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 204 267 10 89 chr2 10103164 10103265 -240584589 - L3 LINE CR1 -896 681 589 2176 133 3 3 chr2 10104019 10104327 -240583527 - AluSx SINE Alu -4 308 1 823 230 0 0 chr2 10104331 10104509 -240583345 - L1M4 LINE L1 -5886 973 796 1529 226 36 67 chr2 10104524 10104971 -240582883 - L1M4 LINE L1 -6422 437 5 2327 106 0 0 chr2 10105112 10105404 -240582450 - AluSp SINE Alu -21 292 1 2225 121 3 0 chr2 10105404 10105701 -240582153 - AluSx SINE Alu -14 298 1 259 217 0 0 chr2 10105782 10105839 -240582015 + MIR SINE MIR 95 143 -65 408 328 54 47 chr2 10105843 10106160 -240581694 + MLT1J LTR MaLR 43 361 -150 1833 195 0 3 chr2 10106179 10106492 -240581362 - AluJo SINE Alu 0 312 1 573 252 8 0 chr2 10106493 10106624 -240581230 + L1ME3 LINE L1 6031 6162 0 199 321 0 0 chr2 10106827 10106883 -240580971 + L2 LINE L2 3214 3269 -3 225 315 0 0 chr2 10107622 10107676 -240580178 - MIR SINE MIR -68 140 87 180 247 149 39 chr2 10107891 10108045 -240579809 - L2 LINE L2 -275 2997 2827 584 212 92 26 chr2 10108498 10108868 -240578986 - MLT1C LTR MaLR -6 461 54 3255 150 51 23 chr2 10108868 10109499 -240578355 + MER51A LTR ERV1 1 640 0 257 179 54 36 chr2 10109499 10109554 -240578300 - MLT1C LTR MaLR -410 57 2 320 324 105 0 chr2 10110266 10110371 -240577483 + MIR SINE MIR 49 164 -98 1637 255 38 24 chr2 10110722 10111246 -240576608 - L1ME1 LINE L1 -2 6176 5664 1453 80 35 0 chr2 10111246 10111445 -240576409 - L1PA10 LINE L1 -5 6163 5958 1637 255 38 24 chr2 10111445 10111497 -240576357 - L1ME1 LINE L1 -514 5664 5614 1228 61 0 0 chr2 10111505 10111653 -240576201 - AluSp/q SINE Alu -8 305 158 182 200 0 29 chr2 10112327 10112362 -240575492 - MIR SINE MIR -7 255 222 221 324 0 15 chr2 10112419 10112487 -240575367 - MIR SINE MIR -166 96 30 848 218 0 6 chr2 10114532 10114711 -240573143 - MLT1B LTR MaLR -1 389 212 1520 173 114 13 chr2 10114728 10115122 -240572732 - LTR48 LTR ERV1 -30 757 324 2311 121 3 0 chr2 10115611 10115916 -240571938 - AluSx SINE Alu -3 309 4 588 246 15 0 chr2 10115928 10116062 -240571792 - MLT1B LTR MaLR -238 136 1 180 239 43 0 chr2 10116127 10116173 -240571681 - MIR SINE MIR -60 148 101 664 234 102 51 chr2 10116370 10116626 -240571228 - MER46C DNA MER2_type -26 312 44 2328 111 0 9 chr2 10117526 10117842 -240570012 - AluSq SINE Alu 0 313 1 235 154 0 0 chr2 10118082 10118121 -240569733 - HAL1 LINE L1 -1837 670 632 579 187 129 19 chr2 10118148 10118303 -240569551 - MLT1C LTR MaLR -295 172 1 2424 90 8 8 chr2 10118385 10118740 -240569114 - THE1A LTR MaLR 0 355 1 3026 213 236 35 chr2 10120174 10121154 -240566700 - MLT-int LTR MaLR -382 1353 177 3118 164 16 41 chr2 10121344 10121978 -240565876 + LTR35 LTR ERV1 1 618 0 22 36 0 55 chr2 10122567 10122622 -240565232 + GC_rich Low_complexity Low_complexity 1 52 0 229 200 18 0 chr2 10122771 10122826 -240565028 + (CGG)n Simple_repeat Simple_repeat 1 56 0 296 162 321 23 chr2 10124973 10125102 -240562752 - MIR SINE MIR -62 146 18 377 281 175 6 chr2 10125429 10125589 -240562265 + MIR SINE MIR 73 259 -3 210 299 155 0 chr2 10125893 10125990 -240561864 + MIR3 SINE MIR 89 200 -8 542 190 0 66 chr2 10126899 10127020 -240560834 + MER5B DNA MER1_type 6 118 -60 463 116 0 0 chr2 10127023 10127092 -240560762 - AluJ/FRAM SINE Alu -14 298 230 506 243 169 0 chr2 10127093 10127241 -240560613 - MER5A DNA MER1_type -7 182 10 795 209 28 11 chr2 10127258 10127435 -240560419 + MER58 DNA MER1_type 3 182 -2238 317 355 8 16 chr2 10127457 10127581 -240560273 - L2 LINE L2 -232 3040 2918 189 0 0 0 chr2 10128143 10128164 -240559690 + (TG)n Simple_repeat Simple_repeat 2 22 0 411 316 35 6 chr2 10128197 10128368 -240559486 - MIR SINE MIR -39 223 48 264 149 0 0 chr2 10131113 10131160 -240556694 + (TG)n Simple_repeat Simple_repeat 1 47 0 271 315 46 9 chr2 10131644 10131752 -240556102 + L2 LINE L2 3197 3308 -5 297 280 21 11 chr2 10134002 10134095 -240553759 - L2 LINE L2 -17 3296 3203 260 258 0 0 chr2 10135230 10135296 -240552558 + L2 LINE L2 3026 3091 -181 982 172 18 57 chr2 10136390 10136617 -240551237 - MER20 DNA MER1_type 0 219 2 233 299 25 11 chr2 10136828 10136927 -240550927 - MIR SINE MIR -63 145 50 1582 193 70 10 chr2 10136937 10137320 -240550534 + L1MB8 LINE L1 5771 6176 -2 192 125 0 0 chr2 10137320 10137352 -240550502 + (CA)n Simple_repeat Simple_repeat 1 32 0 558 232 26 57 chr2 10137496 10137690 -240550164 - MER5A DNA MER1_type -1 188 1 917 173 19 0 chr2 10137770 10137926 -240549928 + FRAM SINE Alu 1 159 -7 475 331 7 47 chr2 10138069 10138152 -240549702 - L1M4 LINE L1 -2149 3997 3912 2229 119 0 3 chr2 10138152 10138454 -240549400 - AluSx SINE Alu -1 311 11 475 331 7 47 chr2 10138454 10138793 -240549061 - L1M4 LINE L1 -2234 3912 3592 459 308 146 48 chr2 10138844 10139316 -240548538 + L2 LINE L2 2797 3312 -1 225 207 0 0 chr2 10139688 10139746 -240548108 - HAL1 LINE L1 -341 2166 2109 551 311 186 29 chr2 10139957 10140548 -240547306 - HAL1 LINE L1 -593 1914 1231 11396 118 8 7 chr2 10140679 10142649 -240545205 - L1P LINE L1 -1967 4179 2201 2215 116 0 0 chr2 10142649 10142953 -240544901 - AluSx SINE Alu 0 304 1 11396 118 8 7 chr2 10142953 10143046 -240544808 - L1P LINE L1 -3945 2201 2110 2605 199 15 2 chr2 10143210 10143798 -240544056 + L1M4 LINE L1 4103 4698 -1448 2120 119 10 13 chr2 10144150 10144462 -240543392 + AluY SINE Alu 1 311 0 2359 96 10 10 chr2 10146839 10147152 -240540702 - AluSq SINE Alu 0 313 1 226 276 26 13 chr2 10147783 10147859 -240539995 + MIR3 SINE MIR 124 200 -8 2041 135 0 10 chr2 10148609 10148905 -240538949 - AluSp SINE Alu -20 293 1 317 43 21 0 chr2 10149680 10149727 -240538127 + (CA)n Simple_repeat Simple_repeat 2 49 0 215 340 53 0 chr2 10149743 10149837 -240538017 - L2 LINE L2 0 3272 3174 216 299 15 0 chr2 10150075 10150142 -240537712 + L2 LINE L2 3205 3272 0 186 43 0 0 chr2 10151370 10151393 -240536461 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 9279 14 0 0 chr2 10152151 10154055 -240533799 - L1HS LINE L1 0 6155 4251 313 313 95 28 chr2 10154415 10154594 -240533260 + MIR SINE MIR 18 208 -54 279 93 0 0 chr2 10155297 10155340 -240532514 + L2 LINE L2 3270 3312 -1 237 221 0 0 chr2 10156973 10157041 -240530813 + (TG)n Simple_repeat Simple_repeat 1 68 0 711 199 19 78 chr2 10157152 10157358 -240530496 - MLT1C LTR MaLR -270 197 4 214 289 39 0 chr2 10157920 10158048 -240529806 + L2 LINE L2 2827 2959 -354 20277 46 49 3 chr2 10158468 10161122 -240526732 + L1P LINE L1 1 2778 -3368 2665 105 12 0 chr2 10161342 10161741 -240526113 - L1PB3 LINE L1 -168 5986 5583 1258 206 4 13 chr2 10161743 10161971 -240525883 + AluJb SINE Alu 1 226 -86 765 87 8 16 chr2 10162053 10162179 -240525675 + (GAAA)n Simple_repeat Simple_repeat 2 126 0 13998 208 9 12 chr2 10162179 10166000 -240521854 - L1PB3 LINE L1 -562 5592 1711 536 213 52 0 chr2 10166007 10166143 -240521711 + L1MB8 LINE L1 6028 6170 -8 296 210 16 0 chr2 10167301 10167363 -240520491 - MER103 DNA DNA -87 79 17 684 236 14 48 chr2 10167695 10167903 -240519951 + MER112 DNA MER1_type 28 228 -32 293 264 148 22 chr2 10167929 10168111 -240519743 - Charlie8 DNA MER1_type -2135 282 78 2072 106 3 61 chr2 10168126 10168455 -240519399 + AluSg SINE Alu 1 310 0 480 288 119 30 chr2 10169185 10169525 -240518329 - MLT1J LTR MaLR -5 610 136 249 163 0 0 chr2 10169583 10169632 -240518222 + A-rich Low_complexity Low_complexity 1 49 0 281 372 121 4 chr2 10169786 10170025 -240517829 - L2 LINE L2 -796 2518 2252 228 278 69 0 chr2 10170251 10170323 -240517531 + Charlie7 DNA MER1_type 5 81 -2531 1737 223 76 5 chr2 10170329 10170750 -240517104 - MLT1C LTR MaLR 0 467 17 1891 122 60 43 chr2 10172096 10172464 -240515390 + THE1C LTR MaLR 2 375 0 1767 221 37 16 chr2 10173497 10173932 -240513922 - L1MB5 LINE L1 0 6174 5731 180 254 68 17 chr2 10175037 10175096 -240512758 + L2 LINE L2 3210 3271 -1 368 277 154 10 chr2 10175852 10176047 -240511807 + MER2 DNA MER2_type 123 345 0 378 363 12 0 chr2 10176069 10176237 -240511617 + (TGAG)n Simple_repeat Simple_repeat 2 171 0 327 186 29 14 chr2 10176687 10176757 -240511097 + MIR SINE MIR 80 150 -112 203 314 102 0 chr2 10176980 10177098 -240510756 - L2 LINE L2 -1 3271 3142 2235 115 118 10 chr2 10177259 10177642 -240510212 - MSTA LTR MaLR -4 424 1 7865 161 47 37 chr2 10177642 10179205 -240508649 - MSTA-int LTR MaLR 0 1580 3 1854 147 155 11 chr2 10179207 10179581 -240508273 - MSTA LTR MaLR 0 428 1 3376 195 15 9 chr2 10179825 10180492 -240507362 + LTR51 LTR ERV1 1 671 0 334 299 190 11 chr2 10180522 10180696 -240507158 - MIR SINE MIR -57 205 1 245 0 0 166 chr2 10181833 10182183 -240505671 + (GTGTG)n Simple_repeat Simple_repeat 1 291 0 304 338 94 25 chr2 10182239 10182440 -240505414 - MIR SINE MIR -27 235 21 482 253 37 19 chr2 10182747 10182909 -240504945 + LTR16C LTR ERVL 76 240 -251 182 211 100 78 chr2 10183464 10183554 -240504300 + MIR SINE MIR 41 132 -76 193 308 161 15 chr2 10183857 10183987 -240503867 + L2 LINE L2 3122 3270 -2 910 118 0 0 chr2 10185048 10185192 -240502662 - L1MA2 LINE L1 0 6304 6161 1481 196 99 6 chr2 10185861 10186193 -240501661 + MLT1A2 LTR MaLR 1 363 -11 288 261 193 8 chr2 10186296 10186415 -240501439 + MIR SINE MIR 48 188 -74 1866 146 13 49 chr2 10186631 10186939 -240500915 - AluSx SINE Alu -15 297 1 30 45 0 0 chr2 10187125 10187169 -240500685 + AT_rich Low_complexity Low_complexity 1 44 0 553 355 55 4 chr2 10187173 10187429 -240500425 + L1ME LINE L1 4981 5249 -897 698 296 86 26 chr2 10187445 10187641 -240500213 + L1ME LINE L1 5265 5448 -673 2282 87 14 3 chr2 10187641 10187929 -240499925 + AluSc SINE Alu 1 291 -18 698 296 86 26 chr2 10187929 10188184 -240499670 + L1ME LINE L1 5448 5743 -378 25 0 0 0 chr2 10188335 10188360 -240499494 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 10188485 10188514 -240499340 + AT_rich Low_complexity Low_complexity 1 29 0 199 278 0 0 chr2 10189926 10189980 -240497874 - MIR SINE MIR -68 140 87 503 225 155 0 chr2 10190499 10190641 -240497213 + MER45A DNA AcHobo 3 166 -12 2699 178 12 21 chr2 10190684 10191264 -240496590 - L1MB7 LINE L1 -17 6167 5593 317 205 72 12 chr2 10191266 10191349 -240496505 - MER50 LTR ERV1 -130 604 517 1696 172 25 0 chr2 10191388 10191707 -240496147 - L1MB7 LINE L1 -572 5608 5282 922 206 57 8 chr2 10192576 10192824 -240495030 + LTR16C LTR ERVL 232 491 0 3431 52 4 4 chr2 10193947 10194404 -240493450 - L1PA7 LINE L1 0 6154 5698 362 244 41 57 chr2 10194563 10194629 -240493225 - MIR SINE MIR -36 226 161 2049 187 65 9 chr2 10194629 10195089 -240492765 - MER66B LTR ERV1 0 486 1 362 244 41 57 chr2 10195089 10195145 -240492709 - MIR SINE MIR -101 161 106 273 252 111 37 chr2 10196068 10196203 -240491651 - HAL1b LINE L1 -10 1338 1194 224 323 79 16 chr2 10198084 10198211 -240489643 - MIR3 SINE MIR -61 147 13 719 183 7 0 chr2 10198654 10198950 -240488904 + (TGGA)n Simple_repeat Simple_repeat 1 298 0 1650 127 77 82 chr2 10199001 10199336 -240488518 + THE1C LTR MaLR 1 335 -40 2219 88 21 0 chr2 10199336 10199518 -240488336 - AluY SINE Alu 0 311 119 297 0 0 0 chr2 10199518 10199551 -240488303 + (TG)n Simple_repeat Simple_repeat 2 34 0 2219 88 21 0 chr2 10199551 10199653 -240488201 - AluY SINE Alu -192 119 21 1650 127 77 82 chr2 10199653 10199694 -240488160 + THE1C LTR MaLR 335 375 0 192 351 0 63 chr2 10200660 10200771 -240487083 - MIR SINE MIR -87 121 18 248 189 0 0 chr2 10201451 10201504 -240486350 - MIR SINE MIR -86 122 70 201 272 29 68 chr2 10201792 10201895 -240485959 - MIR SINE MIR -52 210 112 1921 209 55 24 chr2 10203610 10204064 -240483790 - L1MDa LINE L1 -6058 482 15 330 194 0 0 chr2 10204351 10204423 -240483431 + GA-rich Low_complexity Low_complexity 2 73 0 192 387 65 0 chr2 10207763 10207887 -240479967 - MIR SINE MIR -6 256 125 1020 258 127 39 chr2 10208786 10209223 -240478631 + MLT1D LTR MaLR 1 481 -24 213 94 0 0 chr2 10209223 10209255 -240478599 + (TTAGGG)n Simple_repeat Simple_repeat 4 35 0 1020 258 127 39 chr2 10209255 10209274 -240478580 + MLT1D LTR MaLR 481 497 -8 503 305 13 7 chr2 10209376 10209527 -240478327 - MIR SINE MIR -98 164 13 301 293 109 46 chr2 10209563 10209737 -240478117 + L1ME4a LINE L1 5707 5891 -230 244 330 30 0 chr2 10209962 10210062 -240477792 + MIR SINE MIR 105 207 -55 1247 33 0 0 chr2 10210363 10210557 -240477297 + L1PA3 LINE L1 5994 6187 0 1089 76 0 0 chr2 10211394 10211539 -240476315 - L1P2 LINE L1 -427 5727 5583 1072 62 0 0 chr2 10211539 10211674 -240476180 + L1PA5 LINE L1 6010 6154 0 315 85 0 0 chr2 10212086 10212133 -240475721 + MADE1 DNA Mariner 34 80 0 38 75 0 0 chr2 10212161 10212241 -240475613 + AT_rich Low_complexity Low_complexity 1 80 0 345 220 11 22 chr2 10212319 10212410 -240475444 + L1MC5 LINE L1 7824 7913 -48 3051 87 9 9 chr2 10213654 10214103 -240473751 + L1PA13 LINE L1 5709 6157 -6 1936 190 94 14 chr2 10214143 10214580 -240473274 + MER70A LTR ERVL 1 472 0 2193 133 0 16 chr2 10214672 10214988 -240472866 + AluSx SINE Alu 1 311 -1 258 32 0 0 chr2 10215607 10215638 -240472216 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2171 142 3 0 chr2 10215648 10215951 -240471903 - AluSx SINE Alu -8 304 1 2358 125 39 14 chr2 10215957 10216373 -240471481 + MSTA LTR MaLR 1 426 -2 908 267 28 16 chr2 10216459 10216710 -240471144 + MIR SINE MIR 8 261 -1 271 296 0 0 chr2 10217083 10217164 -240470690 + MIR SINE MIR 50 130 -132 519 272 47 11 chr2 10217970 10218161 -240469693 + L1M4 LINE L1 4774 4971 -1175 1965 176 3 0 chr2 10219021 10219328 -240468526 - AluJb SINE Alu 0 312 5 294 298 70 26 chr2 10219328 10219442 -240468412 - MIR SINE MIR -113 149 31 279 331 31 23 chr2 10220229 10220359 -240467495 + MIR SINE MIR 11 141 -121 285 125 0 0 chr2 10220378 10220426 -240467428 - MSTA LTR MaLR -36 392 345 293 257 55 28 chr2 10220562 10220671 -240467183 + MIR SINE MIR 81 192 -70 1500 153 163 10 chr2 10220800 10221101 -240466753 - MSTA LTR MaLR -70 358 12 328 310 103 35 chr2 10222006 10222151 -240465703 - L2 LINE L2 -1 3312 3158 1749 125 15 0 chr2 10222905 10223169 -240464685 - MSTC LTR MaLR 0 428 161 2240 226 66 32 chr2 10223172 10223854 -240464000 + MER72 LTR ERV1 5 709 -13 302 138 0 31 chr2 10223854 10223919 -240463935 + MER49 LTR ERV1 861 923 0 755 166 76 0 chr2 10223920 10224065 -240463789 - MSTC LTR MaLR -272 156 1 209 196 157 0 chr2 10224443 10224494 -240463360 - L2 LINE L2 0 3272 3214 2493 164 39 2 chr2 10224574 10224983 -240462871 - MSTB LTR MaLR -2 424 1 2559 152 21 8 chr2 10225405 10225860 -240461994 - LTR45B LTR ERV1 -19 512 7 204 300 79 45 chr2 10225959 10226147 -240461707 - MIR SINE MIR -69 193 2 180 0 0 0 chr2 10227079 10227099 -240460755 + (A)n Simple_repeat Simple_repeat 1 20 0 183 162 0 0 chr2 10227537 10227574 -240460280 + GA-rich Low_complexity Low_complexity 2 38 0 398 283 41 0 chr2 10228857 10229002 -240458852 - LTR67 LTR ERVL -7 550 400 430 253 11 0 chr2 10229474 10229569 -240458285 - MER5A DNA MER1_type -93 96 1 313 276 106 64 chr2 10229797 10230080 -240457774 - HAL1 LINE L1 -648 1859 1565 1202 188 49 93 chr2 10230085 10230393 -240457461 - MLT1D LTR MaLR -93 412 125 2333 75 31 0 chr2 10230393 10230685 -240457169 - AluY SINE Alu -10 301 1 1202 188 49 93 chr2 10230685 10230786 -240457068 - MLT1D LTR MaLR -380 125 21 2207 113 0 0 chr2 10230837 10231156 -240456698 - AluSx SINE Alu 0 319 1 192 77 0 0 chr2 10232058 10232084 -240455770 + (CAA)n Simple_repeat Simple_repeat 2 27 0 407 233 20 64 chr2 10232168 10232370 -240455484 - HAL1 LINE L1 -957 1550 1358 2206 134 0 0 chr2 10232474 10232779 -240455075 + AluSx SINE Alu 1 305 -7 927 309 99 41 chr2 10232919 10234253 -240453601 - L1ME3A LINE L1 -204 5966 4485 1526 201 4 14 chr2 10234253 10234557 -240453297 - AluJo SINE Alu 0 307 7 927 309 99 41 chr2 10234557 10235243 -240452611 - L1ME3A LINE L1 -1685 4485 3840 2895 237 47 21 chr2 10235679 10236427 -240451427 + L1M4 LINE L1 8 774 -5768 2743 186 80 7 chr2 10236424 10237036 -240450818 + L1MB7 LINE L1 5383 6039 -145 * 883 116 98 23 chr2 10237070 10237243 -240450611 - L1PB3 LINE L1 0 6154 5969 610 285 36 5 chr2 10237923 10238116 -240449738 - MIR SINE MIR -32 230 32 394 292 0 18 chr2 10240142 10240255 -240447599 - MIR SINE MIR -118 144 34 615 222 84 67 chr2 10241264 10241383 -240446471 - LTR37A LTR ERV1 -25 401 285 411 38 0 0 chr2 10241383 10241436 -240446418 + (TG)n Simple_repeat Simple_repeat 1 53 0 615 222 84 67 chr2 10241436 10241672 -240446182 - LTR37A LTR ERV1 -141 285 40 225 65 0 0 chr2 10241691 10241722 -240446132 + (TATG)n Simple_repeat Simple_repeat 2 32 0 2101 117 74 14 chr2 10241765 10242117 -240445737 - THE1C LTR MaLR -2 373 1 674 245 136 19 chr2 10242540 10242797 -240445057 - L2 LINE L2 0 3313 3027 707 277 60 16 chr2 10242856 10243105 -240444749 + Zaphod DNA AcHobo 3740 3999 -32 646 246 33 15 chr2 10244579 10244807 -240443047 + MER106B DNA MER1_type 1 1059 0 797 239 164 109 chr2 10244894 10245760 -240442094 - L2 LINE L2 0 3313 2417 793 294 58 55 chr2 10246424 10246822 -240441032 + HAL1 LINE L1 775 1173 -1334 3011 94 34 0 chr2 10246835 10247249 -240440605 - MSTA LTR MaLR 0 428 1 731 145 53 30 chr2 10247417 10247548 -240440306 - AluJo SINE Alu -178 134 1 351 368 96 18 chr2 10247652 10247872 -240439982 + HAL1b LINE L1 410 646 -702 1867 137 13 23 chr2 10247994 10248293 -240439561 + AluSx SINE Alu 1 296 -16 307 294 0 10 chr2 10248683 10248785 -240439069 + MIR SINE MIR 152 252 -10 231 247 39 52 chr2 10248948 10249025 -240438829 + L1ME4a LINE L1 5781 5856 -265 318 26 0 0 chr2 10249112 10249151 -240438703 + (CA)n Simple_repeat Simple_repeat 2 40 0 333 261 51 58 chr2 10249155 10249293 -240438561 + L1ME4a LINE L1 5984 6120 -1 300 400 20 0 chr2 10250950 10251100 -240436754 - MIR3 SINE MIR -8 200 48 255 328 172 0 chr2 10251392 10251508 -240436346 - L2 LINE L2 -4 3268 3133 279 357 60 43 chr2 10253001 10253186 -240434668 - L2 LINE L2 -5 3267 3080 856 191 36 0 chr2 10253411 10253579 -240434275 + MER5B DNA MER1_type 4 177 -1 378 250 19 37 chr2 10254107 10254215 -240433639 - MIR SINE MIR -113 149 44 226 204 0 0 chr2 10255246 10255295 -240432559 + L1MD3 LINE L1 6726 6774 -1221 1104 173 124 77 chr2 10255299 10255536 -240432318 + L1MD3 LINE L1 6846 7071 -915 252 234 31 0 chr2 10255536 10255600 -240432254 + MLT1F1 LTR MaLR 44 109 -458 1104 173 124 77 chr2 10255600 10255898 -240431956 + L1MD3 LINE L1 7071 7683 -303 709 135 18 0 chr2 10255888 10255999 -240431855 + L1M3 LINE L1 5567 5679 -501 * 186 299 168 9 chr2 10256341 10256448 -240431406 + L2 LINE L2 3146 3269 -3 317 317 123 18 chr2 10256530 10256757 -240431097 - MIR SINE MIR 0 262 12 220 250 28 65 chr2 10256850 10256958 -240430896 - L2 LINE L2 -1 3271 3168 2357 143 64 7 chr2 10257657 10258062 -240429792 + MSTA LTR MaLR 1 428 0 3588 156 0 0 chr2 10258333 10258860 -240428994 - MER1A DNA MER1_type 0 527 1 283 261 180 18 chr2 10258992 10259103 -240428751 - MIR SINE MIR -82 180 52 1984 214 23 19 chr2 10259136 10259612 -240428242 + L1MD2 LINE L1 5880 6357 -2 1941 138 7 3 chr2 10259732 10260021 -240427833 - AluJb SINE Alu -22 290 1 963 134 0 8 chr2 10260507 10260641 -240427213 + AluSx SINE Alu 1 133 -179 371 230 11 69 chr2 10260659 10260817 -240427037 - L1MC4 LINE L1 -1334 6708 6610 370 253 11 33 chr2 10260740 10260831 -240427023 + L1MC4 LINE L1 6615 6703 -1339 * 1152 127 0 0 chr2 10260834 10260992 -240426862 + AluSx SINE Alu 136 293 -19 210 250 0 0 chr2 10261021 10261077 -240426777 + (TATG)n Simple_repeat Simple_repeat 2 57 0 354 358 113 26 chr2 10261140 10261369 -240426485 + MIR SINE MIR 12 260 -2 404 285 84 45 chr2 10261458 10261637 -240426217 + MIR SINE MIR 6 191 -71 460 264 0 11 chr2 10262056 10262238 -240425616 + (TG)n Simple_repeat Simple_repeat 1 180 0 299 345 35 22 chr2 10262764 10262996 -240424858 + L1 LINE L1 3588 3822 -2324 209 326 113 43 chr2 10263591 10263732 -240424122 + MIR SINE MIR 57 207 -55 414 39 0 0 chr2 10264336 10264388 -240423466 + (CA)n Simple_repeat Simple_repeat 1 52 0 261 163 0 0 chr2 10264416 10264465 -240423389 + (TG)n Simple_repeat Simple_repeat 2 50 0 1814 118 8 0 chr2 10264567 10264812 -240423042 + AluSx SINE Alu 1 247 -65 319 280 100 25 chr2 10265042 10265242 -240422612 - L2 LINE L2 -244 3028 2814 309 291 39 69 chr2 10265827 10265992 -240421862 - MIR3 SINE MIR -6 202 43 2330 119 0 0 chr2 10265992 10266295 -240421559 + AluSx SINE Alu 1 303 -9 309 291 39 69 chr2 10266295 10266332 -240421522 - MIR3 SINE MIR -165 43 6 2408 99 0 0 chr2 10266570 10266873 -240420981 + AluSg SINE Alu 1 303 -7 241 364 8 15 chr2 10266890 10267022 -240420832 - MLT1L LTR MaLR -138 477 347 240 238 16 0 chr2 10267049 10267112 -240420742 - MLT1L LTR MaLR -384 231 168 507 245 113 25 chr2 10268353 10268635 -240419219 + MER115 DNA AcHobo 35 341 -352 629 278 85 5 chr2 10268707 10268919 -240418935 + MER115 DNA AcHobo 465 693 0 2202 109 0 0 chr2 10269523 10269825 -240418029 + AluSx SINE Alu 1 302 -10 302 376 58 19 chr2 10269894 10270099 -240417755 - MIR SINE MIR -14 248 36 340 292 9 0 chr2 10271337 10271450 -240416404 + L1MC4a LINE L1 2705 2818 -3328 281 285 82 40 chr2 10271498 10271815 -240416039 - LTR16A LTR ERVL 0 450 43 2162 270 88 21 chr2 10271894 10273391 -240414463 + L1MC4a LINE L1 4456 5399 -747 759 210 37 1 chr2 10273846 10274038 -240413816 + L1MC5 LINE L1 6637 6804 -1157 * 2825 152 21 6 chr2 10274033 10274559 -240413295 + L1M4c LINE L1 806 1339 -5045 1174 152 19 5 chr2 10274557 10274768 -240413086 + L1M4c LINE L1 2029 2242 -4142 * 5401 245 41 34 chr2 10274764 10275603 -240412251 - L1M4 LINE L1 -1265 4881 4049 6517 83 19 1 chr2 10275603 10277047 -240410807 + L1PA10 LINE L1 4731 6163 -5 5401 245 41 34 chr2 10277047 10277810 -240410044 - L1M4 LINE L1 -2097 4049 3261 1218 127 41 0 chr2 10277810 10278030 -240409824 - L1MA8 LINE L1 -5 6286 6058 5401 245 41 34 chr2 10278030 10278344 -240409510 - L1M4 LINE L1 -2885 3261 2951 303 244 69 38 chr2 10278522 10278653 -240409201 - L1M4 LINE L1 -3539 2607 2473 796 208 45 0 chr2 10278722 10278876 -240408978 - MLT1E1 LTR MaLR -23 631 471 314 68 45 0 chr2 10278869 10278913 -240408941 - MLT1E1 LTR MaLR -607 47 2 * 384 160 70 60 chr2 10278916 10279016 -240408838 - LTR16C LTR ERVL -28 463 363 336 288 131 25 chr2 10279227 10279387 -240408467 + MIR3 SINE MIR 29 205 -3 3951 30 0 8 chr2 10280008 10280478 -240407376 - L1PA4 LINE L1 0 6155 5690 383 326 89 16 chr2 10280501 10280884 -240406970 + LTR16B LTR ERVL 38 448 -16 1704 298 98 62 chr2 10281207 10281645 -240406209 + HERV16 LTR ERVL 495 916 -4080 1383 192 166 16 chr2 10281645 10282078 -240405776 - LTR54B LTR ERV1 0 498 1 1704 298 98 62 chr2 10282078 10283238 -240404616 + HERV16 LTR ERVL 916 2149 -2847 189 0 0 0 chr2 10284235 10284256 -240403598 + (T)n Simple_repeat Simple_repeat 1 21 0 2504 214 17 3 chr2 10284458 10285046 -240402808 - L1M4 LINE L1 -1448 4698 4103 314 319 83 36 chr2 10285210 10285303 -240402551 + L1M4 LINE L1 2110 2197 -3949 2018 117 3 0 chr2 10285303 10285606 -240402248 + AluSx SINE Alu 1 304 0 314 319 83 36 chr2 10285606 10286182 -240401672 + L1M4 LINE L1 2197 2812 -3334 1928 128 16 0 chr2 10286186 10286516 -240401338 + AluSx SINE Alu 1 335 0 1150 140 6 0 chr2 10287792 10287970 -240399884 + FRAM SINE Alu 1 176 0 1584 163 74 41 chr2 10288271 10288634 -240399220 + THE1C LTR MaLR 1 375 0 1922 121 3 10 chr2 10288665 10288971 -240398883 - AluSx SINE Alu -8 304 1 250 362 24 16 chr2 10289151 10289278 -240398576 - L2 LINE L2 -14 3299 3172 819 215 136 68 chr2 10289671 10289721 -240398133 - MLT2D LTR ERVL 0 414 369 420 20 0 0 chr2 10289721 10289770 -240398084 + (CA)n Simple_repeat Simple_repeat 2 50 0 327 49 0 0 chr2 10289773 10289814 -240398040 + (GA)n Simple_repeat Simple_repeat 2 42 0 819 215 136 68 chr2 10289814 10290141 -240397713 - MLT2D LTR ERVL -46 368 7 2091 126 0 0 chr2 10290299 10290601 -240397253 - AluSx SINE Alu -6 306 5 1919 130 7 3 chr2 10290775 10291075 -240396779 + AluSx SINE Alu 1 301 -11 249 215 15 62 chr2 10291394 10291459 -240396395 + MIR SINE MIR 52 113 -149 2100 96 0 0 chr2 10291507 10291787 -240396067 + AluSx SINE Alu 1 280 -32 289 206 46 15 chr2 10291787 10291918 -240395936 + GA-rich Low_complexity Low_complexity 4 138 0 239 167 0 24 chr2 10292262 10292304 -240395550 + L2 LINE L2 3254 3294 -19 2064 106 3 0 chr2 10292817 10293201 -240394653 - AluSx SINE Alu 0 385 1 2362 51 0 32 chr2 10294053 10294367 -240393487 + AluY SINE Alu 1 304 -7 1686 219 21 5 chr2 10294369 10294744 -240393110 - L1MB4 LINE L1 -22 6158 5778 203 296 102 45 chr2 10295295 10295471 -240392383 - MIR3 SINE MIR -10 198 13 2286 58 54 0 chr2 10295726 10296021 -240391833 + AluY SINE Alu 1 311 0 1223 275 72 27 chr2 10297079 10297566 -240390288 - MLT1J LTR MaLR -2 509 1 330 261 74 1 chr2 10297848 10297889 -240389965 - LTR16A1 LTR ERVL -2 455 418 1850 129 10 10 chr2 10297889 10298184 -240389670 - AluJo SINE Alu -17 295 1 330 261 74 1 chr2 10298184 10298368 -240389486 - LTR16A1 LTR ERVL -39 418 190 248 250 45 34 chr2 10299370 10299458 -240388396 + L1MC/D LINE L1 5827 5915 -1893 231 125 0 0 chr2 10299504 10299544 -240388310 + (TG)n Simple_repeat Simple_repeat 1 40 0 4095 132 7 65 chr2 10299860 10300594 -240387260 + LTR8 LTR ERV1 1 691 0 757 208 10 78 chr2 10300911 10301103 -240386751 - L1MC4a LINE L1 -1030 6778 6600 409 126 69 58 chr2 10301122 10301296 -240386558 + (TCTA)n Simple_repeat Simple_repeat 3 178 0 1458 171 79 11 chr2 10301349 10301661 -240386193 - MER61B LTR ERV1 0 425 1 438 194 65 24 chr2 10301666 10301790 -240386064 - L1MC4 LINE L1 -1467 6575 6447 807 43 17 77 chr2 10301943 10302060 -240385794 - LTR17 LTR ERV1 -488 292 183 191 103 26 0 chr2 10302207 10302246 -240385608 + (TATAA)n Simple_repeat Simple_repeat 5 44 0 22 0 0 0 chr2 10302246 10302268 -240385586 + AT_rich Low_complexity Low_complexity 1 22 0 1881 104 23 40 chr2 10302269 10302568 -240385286 - AluSx SINE Alu -18 294 1 1101 184 27 93 chr2 10302571 10302903 -240384951 + L1MB7 LINE L1 5853 6162 -22 180 0 0 0 chr2 10303270 10303290 -240384564 + (A)n Simple_repeat Simple_repeat 1 20 0 334 335 68 27 chr2 10304667 10304930 -240382924 - MLT1L LTR MaLR -171 444 171 212 346 25 0 chr2 10305224 10305305 -240382549 + L2 LINE L2 3104 3186 -86 1257 239 101 47 chr2 10305364 10305904 -240381950 - L2 LINE L2 -21 3292 2709 686 122 19 0 chr2 10305907 10306014 -240381840 - AluSg/x SINE Alu -5 305 197 225 297 14 0 chr2 10306114 10306188 -240381666 - L1MC4 LINE L1 -630 7412 7338 423 206 112 158 chr2 10306208 10306335 -240381519 - L1MC4 LINE L1 -796 7246 7115 2268 83 7 0 chr2 10306335 10306636 -240381218 + AluSq SINE Alu 1 303 -10 423 206 112 158 chr2 10306636 10306920 -240380934 - L1MC4 LINE L1 -927 7115 6854 2236 87 3 7 chr2 10306952 10307251 -240380603 + AluSp SINE Alu 1 298 -15 247 283 76 11 chr2 10308145 10308237 -240379617 + L2 LINE L2 3216 3313 0 1425 181 71 0 chr2 10308266 10308398 -240379456 + AluJo SINE Alu 1 122 -190 2024 94 7 7 chr2 10308398 10308705 -240379149 + AluSp SINE Alu 1 313 0 1425 181 71 0 chr2 10308705 10308853 -240379001 + AluJo SINE Alu 122 301 -11 264 88 53 0 chr2 10309789 10309846 -240378008 + CT-rich Low_complexity Low_complexity 1 60 0 278 293 40 0 chr2 10309846 10309921 -240377933 - L2 LINE L2 -1 3312 3235 1133 179 0 0 chr2 10310308 10310509 -240377345 - L1M3 LINE L1 -1002 5144 4944 2104 157 46 14 chr2 10310517 10311027 -240376827 + L1M3 LINE L1 5157 5685 -483 3087 193 28 14 chr2 10311140 10312296 -240375558 - L1MB7 LINE L1 -317 5867 4697 311 220 59 25 chr2 10312296 10312414 -240375440 + MER65B LTR ERV1 1 122 -409 2099 110 10 0 chr2 10312510 10312818 -240375036 - AluY SINE Alu 0 311 1 252 275 22 33 chr2 10313885 10313976 -240373878 - MIR3 SINE MIR -15 193 104 264 289 132 8 chr2 10313978 10314099 -240373755 + MIR SINE MIR 23 158 -104 2060 133 0 0 chr2 10315020 10315321 -240372533 + AluSx SINE Alu 1 301 -11 441 54 0 0 chr2 10315379 10315435 -240372419 + (TGGGGG)n Simple_repeat Simple_repeat 1 56 0 428 230 151 7 chr2 10315474 10315612 -240372242 + MIR SINE MIR 7 164 -98 767 196 10 85 chr2 10315612 10315728 -240372126 + MER5A DNA MER1_type 1 97 -92 648 216 132 0 chr2 10315728 10315895 -240371959 - MER53 DNA DNA 0 189 1 767 196 10 85 chr2 10315895 10315977 -240371877 + MER5A DNA MER1_type 97 184 -5 199 281 31 0 chr2 10317223 10317287 -240370567 + MIR SINE MIR 43 108 -100 1142 115 4 9 chr2 10317478 10317703 -240370151 + (GGAA)n Simple_repeat Simple_repeat 2 225 0 973 144 6 6 chr2 10317708 10317888 -240369966 + GA-rich Low_complexity Low_complexity 1 180 0 760 104 0 43 chr2 10318037 10318319 -240369535 + (TTCC)n Simple_repeat Simple_repeat 1 269 0 349 309 71 18 chr2 10318419 10318587 -240369267 - L3 LINE CR1 -241 1336 1160 886 53 0 0 chr2 10319248 10319362 -240368492 - AluY SINE Alu -11 300 187 468 279 111 38 chr2 10319362 10319639 -240368215 - L1MEc LINE L1 -3670 2545 2281 367 242 43 93 chr2 10319791 10319828 -240368026 - L1MC/D LINE L1 -2027 5781 5744 2298 80 3 7 chr2 10319828 10320130 -240367724 - AluSq SINE Alu -12 301 1 367 242 43 93 chr2 10320130 10320253 -240367601 - L1MC/D LINE L1 -2064 5744 5629 990 252 65 37 chr2 10320268 10320627 -240367227 + MLT1G3 LTR MaLR 1 336 -194 2329 205 69 0 chr2 10320691 10321183 -240366671 + MER68 LTR ERV1 36 561 -1 343 300 106 24 chr2 10321292 10321462 -240366392 + L1ME LINE L1 5604 5787 -334 808 136 30 8 chr2 10321506 10321638 -240366216 + FRAM SINE Alu 18 152 -24 1945 128 4 0 chr2 10321699 10322007 -240365847 + AluSx SINE Alu 1 309 0 255 185 46 0 chr2 10322812 10322877 -240364977 - MIR SINE MIR -108 100 33 317 197 39 110 chr2 10323052 10323179 -240364675 - L1MC4 LINE L1 -1 8041 7924 22 35 0 0 chr2 10323220 10323249 -240364605 + AT_rich Low_complexity Low_complexity 1 29 0 2220 102 0 10 chr2 10323258 10323562 -240364292 + AluSx SINE Alu 1 301 -11 969 189 71 20 chr2 10324098 10324294 -240363560 + MIR SINE MIR 1 206 -56 222 269 84 50 chr2 10324390 10324509 -240363345 + MIR SINE MIR 22 144 -64 546 273 105 56 chr2 10324638 10324924 -240362930 - MLT1J2 LTR MaLR -114 336 37 996 267 55 46 chr2 10325020 10325064 -240362790 + MLT1D LTR MaLR 158 200 -305 1571 192 0 45 chr2 10325064 10325192 -240362662 + AluJo SINE Alu 19 151 -161 2060 125 3 3 chr2 10325192 10325495 -240362359 + AluSp SINE Alu 1 303 -10 1571 192 0 45 chr2 10325495 10325674 -240362180 + AluJo SINE Alu 151 312 0 996 267 55 46 chr2 10325674 10325974 -240361880 + MLT1D LTR MaLR 200 505 0 351 254 114 0 chr2 10325982 10326096 -240361758 - MIR SINE MIR -127 135 9 1266 226 59 98 chr2 10326910 10327433 -240360421 - L1ME3A LINE L1 -4 6166 5664 1721 138 62 7 chr2 10327473 10327763 -240360091 + AluJb SINE Alu 1 306 -6 2383 85 0 0 chr2 10328187 10328493 -240359361 - AluSp SINE Alu -7 306 1 702 149 79 0 chr2 10328661 10328775 -240359079 - FLAM_C SINE Alu -19 124 2 1167 144 6 0 chr2 10329491 10329671 -240358183 + FRAM SINE Alu 1 176 0 1648 163 74 41 chr2 10329972 10330335 -240357519 + THE1C LTR MaLR 1 375 0 1892 142 7 3 chr2 10330366 10330669 -240357185 - AluSx SINE Alu -8 304 1 264 77 0 0 chr2 10330696 10330735 -240357119 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 191 114 29 0 chr2 10330738 10330773 -240357081 + A-rich Low_complexity Low_complexity 2 37 0 443 317 93 0 chr2 10330897 10331058 -240356796 + MIR SINE MIR 80 255 -7 332 349 15 8 chr2 10331841 10331973 -240355881 + MIR SINE MIR 78 210 -52 244 209 60 30 chr2 10332523 10332590 -240355264 - L2 LINE L2 -58 3255 3187 255 317 72 6 chr2 10335149 10335316 -240352538 - LTR16A LTR ERVL -152 298 121 363 181 14 0 chr2 10336165 10336237 -240351617 - MLT1J2 LTR MaLR -394 73 1 * 622 242 121 26 chr2 10336237 10336508 -240351346 + LTR16A LTR ERVL 154 450 0 2245 97 10 0 chr2 10337862 10338161 -240349693 + AluSx SINE Alu 1 302 -10 1402 161 47 67 chr2 10338237 10338536 -240349318 + AluJo SINE Alu 1 293 -19 2078 117 10 0 chr2 10338602 10338893 -240348961 - AluSg SINE Alu -16 294 1 212 237 0 0 chr2 10339092 10339130 -240348724 + polypurine Low_complexity Low_complexity 3 40 0 464 304 25 0 chr2 10339422 10339583 -240348271 + L1MEd LINE L1 4 168 -5951 1396 282 74 11 chr2 10339594 10340041 -240347813 + L1MEd LINE L1 206 680 -5439 2104 129 0 7 chr2 10340066 10340375 -240347479 + AluSx SINE Alu 1 307 -5 571 197 19 163 chr2 10340377 10340431 -240347423 - MIR SINE MIR -10 252 192 2182 117 3 0 chr2 10340431 10340740 -240347114 + AluSq SINE Alu 1 310 -3 571 197 19 163 chr2 10340740 10340949 -240346905 - MIR SINE MIR -70 192 27 233 270 24 75 chr2 10340992 10341151 -240346703 + L1MEd LINE L1 780 915 -5204 1129 158 6 0 chr2 10341151 10341322 -240346532 + FAM SINE Alu 1 172 -3 233 270 24 75 chr2 10341322 10341495 -240346359 + L1MEd LINE L1 915 1095 -5024 2322 97 0 0 chr2 10341496 10341804 -240346050 + AluSc SINE Alu 1 308 -1 270 304 59 59 chr2 10341887 10342331 -240345523 + L1MEd LINE L1 1231 1674 -4455 2194 108 7 0 chr2 10342620 10342925 -240344929 + AluSx SINE Alu 1 307 -5 262 375 155 0 chr2 10342947 10343115 -240344739 - L2 LINE L2 -464 2850 2657 193 274 0 0 chr2 10343391 10343442 -240344412 + L2 LINE L2 3262 3312 -1 297 345 96 10 chr2 10344510 10344707 -240343147 + MIR SINE MIR 20 233 -29 2299 94 0 3 chr2 10345031 10345338 -240342516 - AluSq SINE Alu -7 306 1 2933 54 6 0 chr2 10345338 10345689 -240342165 - THE1A LTR MaLR -2 353 1 300 285 15 85 chr2 10345750 10345813 -240342041 + MIR SINE MIR 102 153 -109 1433 217 64 87 chr2 10345813 10346342 -240341512 - MLT2B1 LTR ERVL 0 520 4 300 285 15 85 chr2 10346342 10346408 -240341446 + MIR SINE MIR 153 222 -40 1769 167 3 10 chr2 10346560 10346866 -240340988 + AluJo SINE Alu 1 304 -8 2200 109 3 0 chr2 10346866 10347168 -240340686 + AluSx SINE Alu 1 303 -9 227 308 185 0 chr2 10347992 10348122 -240339732 - L3 LINE CR1 -2 1575 1422 464 273 116 12 chr2 10348315 10348487 -240339367 + MIR SINE MIR 28 217 -45 3966 97 39 2 chr2 10349140 10349674 -240338180 - MER41A LTR ERV1 0 554 1 293 210 86 25 chr2 10350166 10350247 -240337607 - MIR SINE MIR 0 262 177 404 247 78 48 chr2 10352327 10352493 -240335361 + MIR SINE MIR 21 191 -71 1901 134 0 20 chr2 10352529 10352828 -240335026 - AluSx SINE Alu -19 293 1 2455 192 22 2 chr2 10352886 10353344 -240334510 + MLT1C LTR MaLR 1 467 0 1611 164 24 7 chr2 10353410 10353702 -240334152 + AluJo SINE Alu 1 297 -15 261 246 0 15 chr2 10353705 10353770 -240334084 - MIR SINE MIR -124 84 21 1571 167 4 4 chr2 10353811 10354068 -240333786 + AluJo SINE Alu 1 257 -55 298 120 0 0 chr2 10354193 10354243 -240333611 + AluJo SINE Alu 249 298 -4 1925 82 86 0 chr2 10354283 10354551 -240333303 - AluSq SINE Alu -16 297 7 335 283 88 2 chr2 10355095 10355233 -240332621 + MIR SINE MIR 36 182 -61 3113 172 27 98 chr2 10355713 10356296 -240331558 + LTR8 LTR ERV1 1 521 -170 1924 107 7 14 chr2 10356296 10356576 -240331278 + AluSx SINE Alu 5 284 -28 207 0 0 0 chr2 10356576 10356599 -240331255 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 3113 172 27 98 chr2 10356607 10356767 -240331087 + LTR8 LTR ERV1 521 691 0 4016 78 73 84 chr2 10356881 10357551 -240330303 - MER4A LTR ERV1 -1 663 1 2252 91 3 0 chr2 10357596 10357894 -240329960 + AluSx SINE Alu 3 301 -11 2024 113 23 7 chr2 10357987 10358287 -240329567 + AluSg SINE Alu 1 305 -5 274 181 38 114 chr2 10358430 10358475 -240329379 - L1MC4 LINE L1 -433 7609 7562 1618 184 0 46 chr2 10358475 10358801 -240329053 - AluJb SINE Alu 0 312 2 274 181 38 114 chr2 10358801 10358860 -240328994 - L1MC4 LINE L1 -480 7562 7513 210 139 28 46 chr2 10358966 10359074 -240328780 + (CGGGG)n Simple_repeat Simple_repeat 2 107 0 266 96 19 58 chr2 10359705 10359757 -240328097 + MIR3 SINE MIR 108 157 -51 1026 129 165 52 chr2 10359767 10360039 -240327815 - LTR48 LTR ERV1 -484 303 1 1991 99 12 46 chr2 10361873 10362018 -240325836 + AluSx SINE Alu 1 149 -163 2382 61 0 0 chr2 10362018 10362311 -240325543 + AluY SINE Alu 1 293 -18 1991 99 12 46 chr2 10362311 10362488 -240325366 + AluSx SINE Alu 149 312 0 225 289 0 62 chr2 10362646 10362743 -240325111 + MIR3 SINE MIR 111 201 -7 180 0 0 0 chr2 10364437 10364457 -240323397 + (A)n Simple_repeat Simple_repeat 1 20 0 1157 126 8 89 chr2 10364900 10365146 -240322708 - AluJo SINE Alu 0 312 87 1632 194 0 7 chr2 10365162 10365456 -240322398 - AluJo SINE Alu -20 292 1 220 269 134 0 chr2 10365687 10365754 -240322100 + MIR SINE MIR 113 188 -74 1176 93 11 6 chr2 10366229 10366441 -240321413 - AluY SINE Alu 0 312 100 2203 64 4 0 chr2 10366696 10367007 -240320847 - AluY SINE Alu 0 312 1 874 217 0 38 chr2 10367059 10367243 -240320611 + AluJo SINE Alu 2 178 -134 443 158 0 0 chr2 10367244 10367320 -240320534 - MER53 DNA DNA -113 76 1 275 292 4 17 chr2 10367570 10367708 -240320146 - MIR SINE MIR -43 219 85 186 71 0 0 chr2 10368420 10368448 -240319406 + (TA)n Simple_repeat Simple_repeat 2 29 0 2063 84 0 119 chr2 10368448 10368637 -240319217 - AluSp SINE Alu -8 295 85 9741 41 8 103 chr2 10368637 10370111 -240317743 - SVA Other Other 0 1386 53 180 0 0 0 chr2 10370111 10370131 -240317723 + (GGGAGA)n Simple_repeat Simple_repeat 3 22 0 2063 84 0 119 chr2 10370131 10370275 -240317579 - AluSp SINE Alu -216 87 1 566 168 0 99 chr2 10370657 10370715 -240317139 - MER53 DNA DNA -44 145 83 1978 108 3 17 chr2 10370715 10371011 -240316843 + AluSx SINE Alu 6 297 -15 566 168 0 99 chr2 10371011 10371113 -240316741 - MER53 DNA DNA -106 83 1 2236 100 7 0 chr2 10371268 10371567 -240316287 + AluSx SINE Alu 5 305 -7 2300 70 7 17 chr2 10372100 10372398 -240315456 + AluY SINE Alu 1 295 -16 322 331 0 0 chr2 10373102 10373259 -240314595 + C-rich Low_complexity Low_complexity 1 157 0 2396 70 0 7 chr2 10373648 10373946 -240313908 - AluY SINE Alu -15 296 1 1244 148 148 61 chr2 10374805 10374955 -240312899 - AluJo SINE Alu -11 301 165 2353 84 0 0 chr2 10374955 10375241 -240312613 - AluSx SINE Alu -26 286 1 1244 148 148 61 chr2 10375241 10375367 -240312487 - AluJo SINE Alu -147 165 1 432 164 218 0 chr2 10375368 10375478 -240312376 - L1 LINE L1 -780 5366 5233 271 274 27 14 chr2 10375952 10376025 -240311829 + MIR3 SINE MIR 90 163 -45 2215 107 0 10 chr2 10376034 10376334 -240311520 - AluSg SINE Alu -13 297 1 1706 95 0 17 chr2 10376568 10376823 -240311031 - AluSx SINE Alu 0 307 57 26 30 0 0 chr2 10376912 10376945 -240310909 + AT_rich Low_complexity Low_complexity 1 33 0 2431 82 0 0 chr2 10378290 10378594 -240309260 - AluSx SINE Alu -8 304 1 2832 0 0 0 chr2 10378604 10378906 -240308948 - AluYa5 SINE Alu -9 302 1 26 0 0 0 chr2 10379043 10379069 -240308785 + AT_rich Low_complexity Low_complexity 1 26 0 2062 122 10 0 chr2 10379256 10379552 -240308302 + AluSx SINE Alu 1 299 -13 492 238 109 12 chr2 10381319 10381489 -240306365 - MIR SINE MIR -47 215 33 30 0 0 0 chr2 10381856 10381886 -240305968 + AT_rich Low_complexity Low_complexity 1 30 0 261 0 0 0 chr2 10383260 10383289 -240304565 + (TA)n Simple_repeat Simple_repeat 2 30 0 30 45 0 0 chr2 10383385 10383429 -240304425 + AT_rich Low_complexity Low_complexity 1 44 0 2203 110 3 0 chr2 10383710 10384011 -240303843 - AluSx SINE Alu -10 302 1 240 143 0 0 chr2 10385031 10385073 -240302781 + (TA)n Simple_repeat Simple_repeat 1 42 0 225 132 0 0 chr2 10386771 10386809 -240301045 + (CAT)n Simple_repeat Simple_repeat 1 38 0 190 212 0 0 chr2 10387056 10387089 -240300765 - L3 LINE CR1 -310 1267 1235 2291 95 0 7 chr2 10387525 10387858 -240299996 + AluSq SINE Alu 1 313 0 272 271 212 33 chr2 10387989 10388140 -240299714 - MER5A DNA MER1_type -11 178 1 1220 205 86 4 chr2 10389248 10389492 -240298362 + Tigger7 DNA MER2_type 1 264 -2223 554 165 10 21 chr2 10389495 10389592 -240298262 + Tigger7 DNA MER2_type 2392 2487 0 2410 78 3 0 chr2 10390182 10390488 -240297366 - AluSx SINE Alu -5 307 1 2252 58 7 4 chr2 10390692 10390970 -240296884 - AluY SINE Alu 0 311 33 956 177 0 6 chr2 10390980 10391144 -240296710 + AluSg/x SINE Alu 149 311 -1 292 350 37 37 chr2 10391560 10391777 -240296077 - L3 LINE CR1 -286 1291 1075 1718 142 0 44 chr2 10391778 10392096 -240295758 + AluJo SINE Alu 1 305 0 22 0 0 0 chr2 10392439 10392461 -240295393 + AT_rich Low_complexity Low_complexity 1 22 0 1108 181 24 0 chr2 10393758 10393963 -240293891 - MER6B DNA MER2_type 0 210 1 26 64 0 0 chr2 10396574 10396621 -240291233 + AT_rich Low_complexity Low_complexity 1 47 0 189 0 0 0 chr2 10396986 10397007 -240290847 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 31 44 0 0 chr2 10397164 10397209 -240290645 + AT_rich Low_complexity Low_complexity 1 45 0 2075 149 0 0 chr2 10397584 10397893 -240289961 - AluSx SINE Alu -3 309 1 318 317 90 0 chr2 10398099 10398244 -240289610 - MIR SINE MIR 0 262 105 31 44 0 0 chr2 10399786 10399831 -240288023 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 10400013 10400035 -240287819 + AT_rich Low_complexity Low_complexity 1 22 0 2111 95 3 71 chr2 10400957 10401283 -240286571 - AluSx SINE Alu -8 304 1 1634 165 0 55 chr2 10401382 10401710 -240286144 - AluJb SINE Alu -2 310 1 339 289 161 55 chr2 10401822 10402191 -240285663 - L1M3 LINE L1 -400 5783 5373 236 325 0 0 chr2 10402238 10402321 -240285533 - L1M3 LINE L1 -852 5294 5212 267 302 87 12 chr2 10402340 10402512 -240285342 - L1M3 LINE L1 -1075 5071 4887 294 216 91 23 chr2 10403289 10403377 -240284477 - L2 LINE L2 0 3313 3220 810 218 60 30 chr2 10404253 10404487 -240283367 + Charlie1 DNA MER1_type 2 242 -2519 394 206 0 11 chr2 10404470 10404562 -240283292 + Charlie1 DNA MER1_type 2622 2712 -49 * 23 0 0 0 chr2 10404562 10404585 -240283269 + AT_rich Low_complexity Low_complexity 1 23 0 2428 59 3 0 chr2 10404585 10404875 -240282979 - AluY SINE Alu -19 292 2 267 95 0 48 chr2 10404880 10404922 -240282932 + Charlie1 DNA MER1_type 2703 2742 -19 466 243 70 61 chr2 10405019 10405208 -240282646 + L1ME3A LINE L1 5977 6169 -1 320 316 86 0 chr2 10405365 10405517 -240282337 + L1ME4a LINE L1 5861 6025 -96 769 289 85 61 chr2 10406472 10407129 -240280725 - HAL1 LINE L1 -1091 1416 744 200 345 48 36 chr2 10407757 10407841 -240280013 + L2 LINE L2 3157 3241 -31 2093 136 0 0 chr2 10407907 10408202 -240279652 + AluSq SINE Alu 1 295 -18 210 245 0 0 chr2 10408782 10408831 -240279023 + (TAG)n Simple_repeat Simple_repeat 1 49 0 490 315 55 15 chr2 10408856 10409056 -240278798 - MIR SINE MIR -54 208 1 684 270 25 0 chr2 10409167 10409330 -240278524 - FAM SINE Alu -4 171 5 44 75 0 0 chr2 10410119 10410212 -240277642 + AT_rich Low_complexity Low_complexity 1 93 0 2057 137 19 3 chr2 10410666 10410973 -240276881 - AluSx SINE Alu 0 312 1 744 235 155 0 chr2 10411288 10411501 -240276353 + MIR SINE MIR 14 259 -3 242 213 43 32 chr2 10411607 10411701 -240276153 + L1ME4a LINE L1 6021 6115 -6 504 222 117 37 chr2 10411959 10412121 -240275733 - MIR SINE MIR -46 216 42 1795 149 0 67 chr2 10412405 10412721 -240275133 - AluJo SINE Alu -17 295 1 971 182 6 6 chr2 10413988 10414153 -240273701 - AluJb SINE Alu -15 297 133 616 341 127 25 chr2 10416775 10417428 -240270426 + L2 LINE L2 2167 2886 -428 902 135 0 118 chr2 10420296 10420474 -240267380 - AluSg/x SINE Alu -19 291 135 1124 102 0 107 chr2 10420490 10420686 -240267168 - AluSg/x SINE Alu -1 311 137 2341 104 0 0 chr2 10420704 10421012 -240266842 - AluSg1 SINE Alu -1 308 1 22 35 0 0 chr2 10421038 10421067 -240266787 + AT_rich Low_complexity Low_complexity 1 29 0 333 335 47 34 chr2 10421844 10422031 -240265823 - MIR SINE MIR -50 212 20 23 54 0 0 chr2 10422237 10422274 -240265580 + AT_rich Low_complexity Low_complexity 1 37 0 1880 127 0 41 chr2 10423207 10423499 -240264355 + AluSx SINE Alu 1 280 -32 186 71 0 0 chr2 10423499 10423527 -240264327 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 490 131 155 0 chr2 10423639 10423723 -240264131 - FRAM SINE Alu -13 163 67 1548 181 71 0 chr2 10423858 10424006 -240263848 - AluJo SINE Alu -11 301 165 2146 91 7 7 chr2 10424006 10424313 -240263541 - AluSp SINE Alu 0 313 1 1548 181 71 0 chr2 10424313 10424445 -240263409 - AluJo SINE Alu -147 165 1 237 283 76 11 chr2 10424474 10424566 -240263288 - L2 LINE L2 0 3313 3216 21 57 0 0 chr2 10425414 10425449 -240262405 + AT_rich Low_complexity Low_complexity 1 35 0 27 0 0 0 chr2 10426197 10426224 -240261630 + AT_rich Low_complexity Low_complexity 1 27 0 247 333 154 0 chr2 10427332 10427494 -240260360 + L1ME LINE L1 5533 5719 -402 300 307 10 53 chr2 10427523 10427654 -240260200 - MIR3 SINE MIR -8 200 72 21 0 0 0 chr2 10428720 10428741 -240259113 + AT_rich Low_complexity Low_complexity 1 21 0 556 238 92 6 chr2 10428859 10429023 -240258831 - MER3 DNA MER1_type -4 205 28 278 250 129 40 chr2 10429056 10429180 -240258674 - MIR SINE MIR -55 153 19 53 49 0 0 chr2 10429421 10429502 -240258352 + AT_rich Low_complexity Low_complexity 1 81 0 563 177 80 0 chr2 10429517 10429630 -240258224 - FLAM_A SINE Alu -11 122 1 1913 169 7 3 chr2 10430630 10430938 -240256916 + AluJb SINE Alu 1 309 -3 195 114 0 0 chr2 10432763 10432798 -240255056 + (CA)n Simple_repeat Simple_repeat 2 36 0 1955 255 24 38 chr2 10433376 10434402 -240253452 + L1MC4 LINE L1 5975 7009 -1033 195 393 28 28 chr2 10434516 10434694 -240253160 - L2 LINE L2 -461 2853 2676 2130 118 3 34 chr2 10435185 10435507 -240252347 - AluSx SINE Alu 0 312 1 572 248 85 0 chr2 10435932 10436085 -240251769 - MER58C DNA MER1_type -6 209 44 1916 146 0 17 chr2 10436126 10436428 -240251426 - AluSx SINE Alu -15 297 1 323 286 150 0 chr2 10436782 10436915 -240250939 + L1ME LINE L1 5258 5410 -949 1830 171 3 3 chr2 10436931 10437229 -240250625 + AluJo SINE Alu 1 298 -14 267 325 96 30 chr2 10437307 10437673 -240250181 + L1ME LINE L1 5440 5810 -311 731 122 0 0 chr2 10437987 10438094 -240249760 + U6 snRNA snRNA 1 107 0 208 27 54 27 chr2 10438103 10438140 -240249714 + (TAAAAA)n Simple_repeat Simple_repeat 1 38 0 2279 101 0 3 chr2 10440870 10441168 -240246686 + AluSq SINE Alu 3 299 -14 291 172 69 0 chr2 10441365 10441423 -240246431 + Alu SINE Alu 224 285 -16 238 134 0 61 chr2 10441436 10441518 -240246336 + (GGA)n Simple_repeat Simple_repeat 3 79 0 2122 112 7 3 chr2 10442095 10442400 -240245454 + AluSg SINE Alu 1 306 -4 1072 132 19 13 chr2 10442443 10442602 -240245252 + FRAM SINE Alu 1 156 -20 25 0 0 0 chr2 10442604 10442629 -240245225 + AT_rich Low_complexity Low_complexity 1 25 0 2259 99 3 3 chr2 10443579 10443882 -240243972 - AluSg SINE Alu -7 303 1 1516 203 62 10 chr2 10444932 10445106 -240242748 - L1MB8 LINE L1 -1 6177 6004 773 246 229 8 chr2 10445106 10445464 -240242390 - L1MC3 LINE L1 -1801 5984 5548 353 212 41 82 chr2 10446460 10446606 -240241248 + MIR3 SINE MIR 15 154 -54 405 0 0 0 chr2 10447047 10447092 -240240762 + (CA)n Simple_repeat Simple_repeat 1 45 0 336 305 110 21 chr2 10448202 10448466 -240239388 - L2 LINE L2 -264 3049 2687 2339 186 87 25 chr2 10448468 10448858 -240238996 - L1MB1 LINE L1 -101 6067 5626 2102 151 107 8 chr2 10448858 10449054 -240238800 - MSTB LTR MaLR -4 422 247 186 71 0 0 chr2 10449054 10449082 -240238772 + (CAGAGA)n Simple_repeat Simple_repeat 2 29 0 2102 151 107 8 chr2 10449082 10449268 -240238586 - MSTB LTR MaLR -179 247 2 2339 186 87 25 chr2 10449268 10449478 -240238376 - L1MB1 LINE L1 -542 5626 5430 1519 115 0 0 chr2 10449478 10449698 -240238156 - AluSg/x SINE Alu 0 301 82 802 149 11 92 chr2 10449707 10449881 -240237973 - FRAM SINE Alu -7 169 10 1542 174 7 5 chr2 10449890 10450344 -240237510 - L1MB1 LINE L1 -727 5441 4933 452 141 0 0 chr2 10450342 10450420 -240237434 + L1 LINE L1 5159 5236 -910 * 219 298 58 29 chr2 10450492 10450596 -240237258 - L2 LINE L2 -939 2375 2269 844 158 30 0 chr2 10450660 10450824 -240237030 + L1MB7 LINE L1 5997 6165 -19 325 206 14 0 chr2 10451056 10451129 -240236725 - Charlie5 DNA MER1_type -27 2585 2512 2260 120 0 3 chr2 10451139 10451447 -240236407 + AluSx SINE Alu 1 307 -5 253 301 118 16 chr2 10451519 10451705 -240236149 + L1MEd LINE L1 1022 1226 -4893 * 907 243 125 75 chr2 10451701 10451882 -240235972 + HAL1 LINE L1 1692 1863 -644 2508 62 3 0 chr2 10451882 10452191 -240235663 - AluY SINE Alu 0 311 2 907 243 125 75 chr2 10452191 10452591 -240235263 + HAL1 LINE L1 1863 2320 -187 2632 106 21 35 chr2 10452591 10452956 -240234898 + MSTA LTR MaLR 2 362 -66 2391 93 0 0 chr2 10452956 10453266 -240234588 - AluSx SINE Alu -2 310 1 2632 106 21 35 chr2 10453266 10453333 -240234521 + MSTA LTR MaLR 362 428 0 907 243 125 75 chr2 10453333 10453495 -240234359 + HAL1 LINE L1 2320 2473 -34 2323 116 0 0 chr2 10453853 10454154 -240233700 + AluSx SINE Alu 1 301 -11 2303 67 7 17 chr2 10454154 10454452 -240233402 + AluY SINE Alu 1 295 -16 2109 135 0 0 chr2 10455016 10455313 -240232541 - AluSx SINE Alu -15 297 1 368 277 80 0 chr2 10455419 10455556 -240232298 - L2 LINE L2 0 3313 3166 * 863 246 304 25 chr2 10455552 10455984 -240231870 + L2 LINE L2 1876 2186 -1128 2392 98 3 0 chr2 10455984 10456290 -240231564 - AluSc SINE Alu -2 307 1 863 246 304 25 chr2 10456290 10456496 -240231358 + L2 LINE L2 2186 2692 -622 2255 101 0 7 chr2 10456747 10457043 -240230811 - AluSg SINE Alu -16 294 1 3284 175 52 110 chr2 10457402 10458325 -240229529 + L1MC/D LINE L1 3887 4863 -1470 1858 167 0 7 chr2 10458325 10458630 -240229224 + AluJo SINE Alu 1 303 -9 3284 175 52 110 chr2 10458630 10459241 -240228613 + L1MC/D LINE L1 4863 5508 -825 2168 99 17 3 chr2 10459241 10459533 -240228321 + AluSx SINE Alu 1 296 -16 2802 22 0 3 chr2 10459535 10459854 -240228000 + AluYb8 SINE Alu 1 318 0 3284 175 52 110 chr2 10459854 10460311 -240227543 + L1MC/D LINE L1 5509 5792 -541 887 173 71 74 chr2 10460434 10460643 -240227211 - L1MC2 LINE L1 -176 6168 5959 3116 127 12 0 chr2 10460643 10461130 -240226724 - L1PB1 LINE L1 -13 6138 5646 887 173 71 74 chr2 10461130 10461243 -240226611 - L1MC2 LINE L1 -385 5959 5847 3404 143 51 22 chr2 10461249 10461904 -240225950 - L1MA8 LINE L1 0 6291 5614 2133 128 0 3 chr2 10461904 10462209 -240225645 - AluSx SINE Alu -8 304 1 3404 143 51 22 chr2 10462209 10462238 -240225616 - L1MA8 LINE L1 -677 5614 5587 2808 211 14 24 chr2 10462238 10463285 -240224569 + L1MCa LINE L1 2191 3227 -3199 253 115 39 19 chr2 10463478 10463530 -240224324 - MLT1A1 LTR MaLR -312 53 1 327 270 40 24 chr2 10463545 10463776 -240224078 - L1 LINE L1 -1155 4991 4757 486 286 38 54 chr2 10463783 10464098 -240223756 - L1MEc LINE L1 -5014 1382 1073 * 551 231 48 16 chr2 10464095 10464281 -240223573 - L1ME1 LINE L1 -274 5892 5701 1489 243 23 0 chr2 10464514 10464901 -240222953 - L1MB7 LINE L1 -2 6182 5787 1539 252 94 73 chr2 10464901 10465624 -240222230 + MER21B LTR ERV1 1 738 -125 985 224 127 26 chr2 10465632 10465988 -240221866 - L1MB7 LINE L1 -376 5786 5402 2787 205 20 29 chr2 10465994 10466471 -240221383 - L1MB7 LINE L1 -904 5242 4773 1615 169 11 7 chr2 10466471 10466743 -240221111 - AluJo SINE Alu -39 273 1 2787 205 20 29 chr2 10466743 10467032 -240220822 - L1MB7 LINE L1 -1373 4773 4483 332 22 22 0 chr2 10467054 10467099 -240220755 + (CA)n Simple_repeat Simple_repeat 2 47 0 1964 101 4 14 chr2 10467238 10467516 -240220338 - AluSx SINE Alu -37 275 1 311 235 101 27 chr2 10467619 10467768 -240220086 - HAL1 LINE L1 -920 1587 1428 2233 116 0 13 chr2 10468140 10468443 -240219411 - AluSq SINE Alu -14 299 1 294 210 0 0 chr2 10468477 10468539 -240219315 + MLT1A1 LTR MaLR 108 169 -221 677 236 40 0 chr2 10469049 10469223 -240218631 + MLT1A1 LTR MaLR 170 350 -15 276 280 0 0 chr2 10469760 10469853 -240218001 + LTR58 LTR ERV1 350 442 -237 537 201 62 7 chr2 10469952 10470096 -240217758 + LTR35 LTR ERV1 467 618 0 397 208 247 6 chr2 10470154 10470332 -240217522 + L1MC4 LINE L1 7559 7779 -263 700 188 130 39 chr2 10470332 10470540 -240217314 + Cheshire DNA MER1_type 1803 2029 -391 2050 158 98 15 chr2 10470540 10471006 -240216848 + L1MC3 LINE L1 6249 6316 -17 1675 179 77 3 chr2 10471007 10471386 -240216468 + Cheshire DNA MER1_type 2014 2420 0 440 165 9 35 chr2 10471388 10471503 -240216351 + L1MC5 LINE L1 7806 7917 -44 1642 173 26 29 chr2 10471533 10471839 -240216015 + AluJo SINE Alu 1 305 -7 263 266 15 38 chr2 10471899 10472105 -240215749 + L1MC5 LINE L1 3580 3779 -2367 68 24 0 0 chr2 10472259 10472341 -240215513 + AT_rich Low_complexity Low_complexity 1 82 0 527 313 36 27 chr2 10472353 10472688 -240215166 + L1MC5 LINE L1 5354 5691 -2117 297 218 142 120 chr2 10472763 10472988 -240214866 + L1MC5 LINE L1 6828 7057 -904 628 232 35 51 chr2 10473100 10473354 -240214500 + L1MC5 LINE L1 7169 7418 -543 2095 206 27 29 chr2 10473858 10474381 -240213473 + L1MB7 LINE L1 5595 6116 -68 918 219 158 50 chr2 10474891 10475348 -240212506 + Charlie7 DNA MER1_type 2090 2595 -17 2332 96 0 3 chr2 10475533 10475835 -240212019 + AluSq SINE Alu 2 302 -11 1333 97 11 5 chr2 10475957 10476142 -240211712 - AluSq SINE Alu -127 186 1 233 297 36 9 chr2 10476209 10476320 -240211534 + L2 LINE L2 2624 2737 -577 952 103 82 0 chr2 10476345 10476491 -240211363 - AluSg/x SINE Alu -1 311 154 1424 181 15 39 chr2 10476616 10476953 -240210901 + MER33 DNA MER1_type 1 319 -5 22 0 0 0 chr2 10477103 10477125 -240210729 + AT_rich Low_complexity Low_complexity 1 22 0 3140 252 99 68 chr2 10477388 10478839 -240209015 + L2 LINE L2 1426 2922 -392 1429 217 39 39 chr2 10479018 10479130 -240208724 + L1MC4 LINE L1 6528 6639 -1403 2245 108 0 10 chr2 10479130 10479436 -240208418 + AluSx SINE Alu 1 303 -9 1429 217 39 39 chr2 10479436 10479481 -240208373 + L1MC4 LINE L1 6639 6683 -1359 306 0 0 0 chr2 10479481 10479515 -240208339 + (CA)n Simple_repeat Simple_repeat 2 35 0 1429 217 39 39 chr2 10479515 10479743 -240208111 + L1MC4 LINE L1 6682 6914 -1128 597 193 62 0 chr2 10479777 10479922 -240207932 + L1MD3 LINE L1 7834 7987 -8 530 170 38 0 chr2 10479927 10480033 -240207821 + L1MC4 LINE L1 6898 7007 -1035 * 734 202 118 11 chr2 10480010 10480188 -240207666 + L1MC4 LINE L1 7525 7721 -321 622 267 163 48 chr2 10480239 10480613 -240207241 + L2 LINE L2 2897 3313 0 2354 84 0 0 chr2 10481350 10481648 -240206206 - AluSc SINE Alu -11 298 1 866 158 13 19 chr2 10481743 10481901 -240205953 - MER2 DNA MER2_type -1 344 188 1187 174 0 0 chr2 10483226 10483422 -240204432 - MER2 DNA MER2_type -149 196 1 1794 167 40 22 chr2 10483723 10484094 -240203760 + L1MC1 LINE L1 5956 6333 0 473 318 64 98 chr2 10484317 10484490 -240203364 - L3 LINE CR1 -761 816 639 2438 83 3 0 chr2 10484490 10484792 -240203062 + AluSp SINE Alu 1 303 -10 473 318 64 98 chr2 10484792 10485065 -240202789 - L3 LINE CR1 -938 639 390 1756 175 7 3 chr2 10485065 10485362 -240202492 + AluJb SINE Alu 11 308 -4 473 318 64 98 chr2 10485362 10485462 -240202392 - L3 LINE CR1 -1187 390 288 248 233 276 17 chr2 10485861 10485977 -240201877 - MIR3 SINE MIR -21 187 42 22 70 0 0 chr2 10486186 10486229 -240201625 + AT_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr2 10487051 10487087 -240200767 + AT_rich Low_complexity Low_complexity 1 36 0 318 127 113 0 chr2 10487751 10487822 -240200032 + L1ME4a LINE L1 6042 6120 -1 272 262 58 81 chr2 10487916 10488088 -240199766 - MIR SINE MIR -46 216 49 785 164 0 0 chr2 10488303 10488425 -240199429 + FLAM_A SINE Alu 4 125 -8 203 193 18 18 chr2 10488733 10488790 -240199064 + (CA)n Simple_repeat Simple_repeat 1 57 0 737 158 0 0 chr2 10489828 10489942 -240197912 + FLAM_A SINE Alu 2 115 -18 2166 99 0 3 chr2 10490777 10491070 -240196784 + AluSx SINE Alu 1 292 -20 846 288 90 54 chr2 10491231 10491599 -240196255 - L2 LINE L2 -1062 2252 1872 433 301 52 42 chr2 10491808 10492001 -240195853 - MIR SINE MIR -11 251 57 21 57 0 0 chr2 10492037 10492072 -240195782 + AT_rich Low_complexity Low_complexity 1 35 0 1830 137 158 12 chr2 10492272 10492614 -240195240 + MSTA LTR MaLR 1 392 -36 189 298 88 35 chr2 10492661 10492718 -240195136 + MIR SINE MIR 16 75 -133 206 295 167 0 chr2 10492744 10492822 -240195032 - L2 LINE L2 -1356 1958 1868 184 218 127 55 chr2 10492835 10492890 -240194964 + MIR SINE MIR 83 141 -67 322 123 14 123 chr2 10492997 10493070 -240194784 + MER96B DNA MER1_type? 168 232 -185 * 918 166 91 58 chr2 10493069 10493310 -240194544 + MER96B DNA MER1_type? 169 417 0 2422 57 3 13 chr2 10493386 10493687 -240194167 + AluY SINE Alu 1 298 -13 211 167 0 42 chr2 10493694 10493742 -240194112 + GA-rich Low_complexity Low_complexity 2 47 0 1930 131 0 36 chr2 10494293 10494598 -240193256 - AluSx SINE Alu -18 294 1 2208 106 0 0 chr2 10495184 10495476 -240192378 + AluSx SINE Alu 1 292 -20 685 0 24 0 chr2 10495476 10495561 -240192293 + (GA)n Simple_repeat Simple_repeat 2 88 0 225 338 28 0 chr2 10496527 10496672 -240191182 + L1ME3A LINE L1 5689 5837 -284 234 266 278 6 chr2 10497086 10497259 -240190595 - L1M4 LINE L1 -1538 4608 4389 496 237 89 7 chr2 10497479 10497614 -240190240 + L1ME3A LINE L1 5993 6138 -32 2175 114 20 0 chr2 10497703 10498002 -240189852 + AluSx SINE Alu 1 305 -7 2335 80 0 23 chr2 10498496 10498798 -240189056 + AluSg SINE Alu 1 295 -15 1764 92 8 16 chr2 10499772 10500021 -240187833 - AluSq SINE Alu -16 297 51 1726 169 51 3 chr2 10500211 10500506 -240187348 + AluJb SINE Alu 1 309 -3 203 182 0 0 chr2 10502267 10502300 -240185554 + (CA)n Simple_repeat Simple_repeat 1 33 0 1296 166 42 33 chr2 10502394 10502731 -240185123 + Charlie1 DNA MER1_type 2303 2642 -119 1002 215 38 57 chr2 10502783 10503150 -240184704 - L1ME1 LINE L1 -5 6161 5802 2935 156 73 14 chr2 10503181 10503808 -240184046 + L1MC2 LINE L1 5670 6333 -11 23 0 0 0 chr2 10503955 10503978 -240183876 + AT_rich Low_complexity Low_complexity 1 23 0 227 224 104 15 chr2 10504539 10504606 -240183248 + L1MC/D LINE L1 5732 5804 -529 222 258 0 32 chr2 10505619 10505681 -240182173 - L2 LINE L2 -86 3227 3168 26 30 0 0 chr2 10505945 10505978 -240181876 + AT_rich Low_complexity Low_complexity 1 33 0 776 193 58 18 chr2 10506400 10506571 -240181283 + MER3 DNA MER1_type 32 209 0 21 36 0 0 chr2 10506693 10506721 -240181133 + AT_rich Low_complexity Low_complexity 1 28 0 258 340 158 14 chr2 10507833 10508042 -240179812 + MIR SINE MIR 3 241 -21 333 0 0 0 chr2 10508089 10508126 -240179728 + (TA)n Simple_repeat Simple_repeat 2 38 0 11423 37 11 1 chr2 10508128 10510290 -240177564 - L1PA5 LINE L1 0 6154 3976 411 308 107 16 chr2 10510398 10510701 -240177153 - MLT1J LTR MaLR -2 509 137 831 228 120 48 chr2 10511142 10511476 -240176378 + L1MEc LINE L1 73 430 -5966 704 217 100 11 chr2 10511513 10511693 -240176161 + L1MEc LINE L1 504 699 -5697 1952 131 7 7 chr2 10511694 10511985 -240175869 - AluSg SINE Alu -18 292 2 243 135 0 0 chr2 10511985 10512022 -240175832 + Alu SINE Alu 36 72 -228 1999 145 0 45 chr2 10512346 10512705 -240175149 + MLT1B LTR MaLR 2 344 -46 251 103 0 0 chr2 10512771 10512810 -240175044 + L1MA8 LINE L1 6234 6272 -19 28 29 0 0 chr2 10512887 10512922 -240174932 + AT_rich Low_complexity Low_complexity 1 35 0 273 306 111 9 chr2 10513733 10513841 -240174013 + MIR SINE MIR 19 137 -71 2088 170 31 12 chr2 10514184 10514601 -240173253 - L1MC1 LINE L1 0 6333 5909 1807 108 16 49 chr2 10514601 10514667 -240173187 + L1MC1 LINE L1 5608 5675 -658 2082 78 37 0 chr2 10514667 10514966 -240172888 + AluSc SINE Alu 1 309 0 1807 108 16 49 chr2 10514966 10515197 -240172657 + L1MC1 LINE L1 5675 5898 -435 191 80 0 0 chr2 10515253 10515278 -240172576 + L2 LINE L2 3217 3241 -31 725 203 83 95 chr2 10515625 10515867 -240171987 - MER8 DNA MER2_type 0 239 1 1118 331 172 43 chr2 10516065 10518086 -240169768 - L2 LINE L2 -437 2877 596 1726 174 4 0 chr2 10518100 10518375 -240169479 - AluJb SINE Alu -36 276 1 200 233 55 68 chr2 10518759 10518832 -240169022 - L2 LINE L2 -1 3271 3200 3710 36 0 0 chr2 10519146 10519586 -240168268 + L1PA3 LINE L1 5709 6148 -7 524 116 42 53 chr2 10521109 10521204 -240166650 + AluSg/x SINE Alu 199 292 -17 790 63 5 68 chr2 10521247 10521438 -240166416 + (GGA)n Simple_repeat Simple_repeat 2 180 0 237 65 0 0 chr2 10521672 10521703 -240166151 + (A)n Simple_repeat Simple_repeat 1 31 0 2227 105 0 7 chr2 10521858 10522153 -240165701 - AluSc SINE Alu -16 293 1 642 71 0 0 chr2 10522167 10522252 -240165602 - L1PA5 LINE L1 -2 6152 6068 272 322 74 16 chr2 10523325 10523446 -240164408 + L2 LINE L2 3180 3307 -6 1330 224 116 77 chr2 10523477 10524301 -240163553 + L2 LINE L2 2288 3313 0 596 203 129 25 chr2 10524299 10524462 -240163392 - MIR SINE MIR -13 249 70 * 6746 53 10 24 chr2 10524462 10525085 -240162769 + L1PA7 LINE L1 4983 5583 -571 1920 118 0 0 chr2 10525085 10525348 -240162506 + AluSx SINE Alu 1 263 -49 6746 53 10 24 chr2 10525348 10525893 -240161961 + L1PA7 LINE L1 5583 6134 -20 405 0 0 0 chr2 10525896 10525941 -240161913 + (TAA)n Simple_repeat Simple_repeat 3 47 0 764 291 81 73 chr2 10526138 10526682 -240161172 + L2 LINE L2 2768 3313 0 314 307 48 24 chr2 10527086 10527252 -240160602 + L1MEc LINE L1 44 213 -6183 874 123 23 0 chr2 10527569 10527699 -240160155 + FLAM_C SINE Alu 1 133 0 2498 63 0 0 chr2 10527893 10528195 -240159659 + AluY SINE Alu 1 302 -9 593 236 58 71 chr2 10528284 10528593 -240159261 + L1MEc LINE L1 667 971 -5234 2348 95 0 28 chr2 10528595 10528912 -240158942 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr2 10529117 10529138 -240158716 + AT_rich Low_complexity Low_complexity 1 21 0 2062 116 148 19 chr2 10529138 10529517 -240158337 + MSTA LTR MaLR 1 428 0 690 284 84 6 chr2 10529536 10529856 -240157998 + L1MEc LINE L1 2280 2624 -3591 321 266 78 47 chr2 10531062 10531190 -240156664 + L2 LINE L2 3182 3313 0 509 261 49 8 chr2 10532408 10532587 -240155267 + MIR SINE MIR 30 213 -49 2331 106 0 0 chr2 10533122 10533424 -240154430 + AluSx SINE Alu 1 302 -10 286 307 175 53 chr2 10534461 10534494 -240153360 + MIR SINE MIR 1 29 -233 2174 105 0 26 chr2 10534494 10534799 -240153055 + AluSg SINE Alu 2 298 -12 286 307 175 53 chr2 10534799 10534993 -240152861 + MIR SINE MIR 29 256 -6 330 297 7 41 chr2 10535167 10535312 -240152542 + L1ME4a LINE L1 5927 6066 -55 2288 95 48 28 chr2 10535385 10535742 -240152112 + THE1B LTR MaLR 1 364 0 33 43 0 0 chr2 10535825 10535872 -240151982 + AT_rich Low_complexity Low_complexity 1 47 0 198 0 0 0 chr2 10536608 10536630 -240151224 + (CA)n Simple_repeat Simple_repeat 1 22 0 1031 292 92 44 chr2 10537242 10537763 -240150091 - L2 LINE L2 -715 2599 2054 686 299 25 29 chr2 10537904 10538148 -240149706 + MIR SINE MIR 20 262 0 726 208 0 50 chr2 10538784 10538943 -240148911 + AluJo SINE Alu 16 166 -146 1892 129 58 0 chr2 10538943 10539252 -240148602 - Tigger3(Golem) DNA MER2_type -636 2393 2067 728 184 0 98 chr2 10539248 10539411 -240148443 - Tigger3(Golem) DNA MER2_type -2882 147 1 * 280 264 136 50 chr2 10540201 10540341 -240147513 - MIR SINE MIR -57 205 54 191 91 0 45 chr2 10540466 10540510 -240147344 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 500 77 0 0 chr2 10540658 10540723 -240147131 - AluY SINE Alu -12 299 235 1249 111 0 11 chr2 10540723 10540903 -240146951 - AluY SINE Alu -133 178 1 2113 224 31 4 chr2 10540931 10541409 -240146445 + L1MCa LINE L1 27 517 -5909 214 171 0 0 chr2 10541423 10541464 -240146390 + (TG)n Simple_repeat Simple_repeat 2 42 0 315 0 0 0 chr2 10541479 10541514 -240146340 + (TG)n Simple_repeat Simple_repeat 2 36 0 3086 159 70 45 chr2 10541529 10542185 -240145669 - L1M4c LINE L1 -4776 1608 929 2068 128 3 0 chr2 10542185 10542482 -240145372 + AluSx SINE Alu 1 298 -14 3086 159 70 45 chr2 10542482 10542596 -240145258 - L1M4c LINE L1 -5455 929 819 1688 183 0 11 chr2 10542723 10543008 -240144846 - AluJb SINE Alu -30 282 1 6207 175 90 57 chr2 10543009 10544594 -240143260 - L1MCa LINE L1 -4763 1663 27 2451 41 24 0 chr2 10544700 10544991 -240142863 + AluY SINE Alu 1 298 -13 6234 207 56 64 chr2 10545099 10545552 -240142302 + L1MCa LINE L1 1688 2143 -4283 2051 121 35 0 chr2 10545552 10545842 -240142012 + AluSx SINE Alu 1 300 -12 6234 207 56 64 chr2 10545842 10546775 -240141079 + L1MCa LINE L1 2143 3082 -3344 969 81 0 0 chr2 10546775 10546898 -240140956 + AluY SINE Alu 174 296 -15 6234 207 56 64 chr2 10546898 10547237 -240140617 + L1MCa LINE L1 3082 3422 -3004 225 0 0 0 chr2 10547237 10547262 -240140592 + (CAA)n Simple_repeat Simple_repeat 3 27 0 6234 207 56 64 chr2 10547262 10547756 -240140098 + L1MCa LINE L1 3422 3919 -2507 1661 152 42 30 chr2 10547756 10547929 -240139925 - MER44D DNA MER2_type -1882 609 440 2314 93 0 0 chr2 10547929 10548231 -240139623 + AluSq SINE Alu 1 302 -11 1661 152 42 30 chr2 10548231 10548392 -240139462 - MER44D DNA MER2_type -2051 440 1 6234 207 56 64 chr2 10548392 10548650 -240139204 + L1MCa LINE L1 3919 4178 -2248 2271 105 0 3 chr2 10548650 10548955 -240138899 - AluSx SINE Alu -8 304 1 6234 207 56 64 chr2 10548955 10549605 -240138249 + L1MCa LINE L1 4178 4911 -1515 1350 179 37 7 chr2 10549608 10549904 -240137950 + L1MCa LINE L1 1900 2204 -4222 722 163 18 54 chr2 10549921 10550087 -240137767 - L1MC2 LINE L1 -10 6334 6175 2194 97 0 39 chr2 10601110 10601420 -240086434 + AluSq SINE Alu 1 298 -15 279 291 120 49 chr2 10601505 10601650 -240086204 + MIR SINE MIR 3 153 -58 2441 42 0 3 chr2 10601752 10602070 -240085784 + AluY SINE Alu 1 317 0 2293 108 3 0 chr2 10604154 10604459 -240083395 + AluSx SINE Alu 6 311 -1 300 233 138 0 chr2 10604549 10604665 -240083189 + MIR3 SINE MIR 48 179 -29 2281 102 0 0 chr2 10605097 10605409 -240082445 + AluSq SINE Alu 1 312 0 1326 139 10 19 chr2 10606276 10606485 -240081369 - AluJo SINE Alu -105 207 1 350 69 17 0 chr2 10606595 10606653 -240081201 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 846 240 0 62 chr2 10606776 10607001 -240080853 + MIR SINE MIR 21 231 -31 354 305 85 0 chr2 10607129 10607166 -240080688 + L2 LINE L2 3143 3175 -97 1188 195 145 11 chr2 10607166 10607428 -240080426 - AluJo SINE Alu -4 298 2 354 305 85 0 chr2 10607428 10607508 -240080346 + L2 LINE L2 3175 3270 -2 466 276 119 27 chr2 10607605 10607790 -240080064 - MIR SINE MIR -12 250 49 2214 121 0 13 chr2 10608304 10608611 -240079243 + AluSx SINE Alu 1 303 -9 216 0 0 0 chr2 10608611 10608635 -240079219 + (TA)n Simple_repeat Simple_repeat 2 25 0 557 181 69 0 chr2 10609034 10609150 -240078704 + MER3 DNA MER1_type 7 130 -79 206 54 0 54 chr2 10609150 10609187 -240078667 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 843 152 0 0 chr2 10609265 10609403 -240078451 + MLT1A1 LTR MaLR 1 138 -227 * 2034 149 109 92 chr2 10609402 10610018 -240077836 + MER4A LTR ERV1 37 662 -2 2043 149 41 70 chr2 10610029 10610569 -240077285 - MLT2A2 LTR ERVL 0 554 1 943 121 45 38 chr2 10610572 10610729 -240077125 + MLT1A1 LTR MaLR 208 365 0 510 243 19 0 chr2 10610730 10610837 -240077017 + MER5A DNA MER1_type 1 109 -80 219 139 28 0 chr2 10610869 10610905 -240076949 - MIR3 SINE MIR -50 158 122 539 135 15 2 chr2 10611032 10611125 -240076729 - MSTD LTR MaLR -54 413 244 682 151 0 0 chr2 10611132 10611238 -240076616 - MSTD LTR MaLR -290 106 1 315 95 11 7 chr2 10611663 10611718 -240076136 + AluJo SINE Alu 1 44 -255 231 301 81 62 chr2 10611718 10612027 -240075827 - L2 LINE L2 -1743 1571 1257 187 254 186 0 chr2 10612197 10612256 -240075598 - MIR3 SINE MIR -11 197 128 1894 127 3 7 chr2 10612256 10612548 -240075306 - MSTA LTR MaLR 0 428 138 846 141 15 0 chr2 10612687 10612822 -240075032 - MSTA LTR MaLR -291 137 1 253 295 42 11 chr2 10612824 10612919 -240074935 - MIR SINE MIR -78 130 33 197 321 0 0 chr2 10613074 10613127 -240074727 + MIR SINE MIR 95 147 -61 209 222 0 0 chr2 10613791 10613836 -240074018 + T-rich Low_complexity Low_complexity 1 45 0 311 364 128 5 chr2 10614084 10614271 -240073583 + L2 LINE L2 2862 3071 -201 2237 109 0 10 chr2 10614760 10615062 -240072792 - AluSc SINE Alu -10 299 1 1797 140 0 15 chr2 10615233 10615504 -240072350 + AluJo SINE Alu 26 292 -20 796 294 126 26 chr2 10615850 10616130 -240071724 - L1MC4a LINE L1 -1638 6170 5919 2276 121 7 0 chr2 10616130 10616437 -240071417 - AluSq SINE Alu -4 309 1 796 294 126 26 chr2 10616437 10616727 -240071127 - L1MC4a LINE L1 -1889 5919 5543 1792 164 3 35 chr2 10617029 10617346 -240070508 + AluJo SINE Alu 1 307 -5 1604 157 23 134 chr2 10618255 10618469 -240069385 + MLT1B LTR MaLR 1 143 -247 2178 125 0 3 chr2 10618469 10618765 -240069089 + AluSx SINE Alu 1 295 -17 1604 157 23 134 chr2 10618765 10618989 -240068865 + MLT1B LTR MaLR 143 390 0 234 0 0 0 chr2 10619345 10619371 -240068483 + (TG)n Simple_repeat Simple_repeat 1 26 0 762 152 0 23 chr2 10620215 10620347 -240067507 + FLAM_C SINE Alu 5 133 0 263 224 40 0 chr2 10620375 10620451 -240067403 + MER58 DNA MER1_type 2342 2420 0 479 273 120 0 chr2 10620668 10620851 -240067003 + L1ME3 LINE L1 5687 5891 -271 203 229 0 0 chr2 10621489 10621524 -240066330 + polypurine Low_complexity Low_complexity 2 36 0 1992 127 60 0 chr2 10622769 10623053 -240064801 - AluSq SINE Alu -12 301 1 314 169 31 0 chr2 10623110 10623175 -240064679 - L1MD3 LINE L1 -1016 6979 6913 335 274 123 19 chr2 10623356 10623462 -240064392 - MIR SINE MIR -112 150 34 245 314 39 0 chr2 10623875 10623977 -240063877 + MIR SINE MIR 128 233 -29 699 101 0 0 chr2 10624184 10624283 -240063571 - L1MB5 LINE L1 -7 6167 6069 316 282 141 0 chr2 10624470 10624555 -240063299 - L2 LINE L2 -4 3309 3213 228 305 124 38 chr2 10625569 10625674 -240062180 + L2 LINE L2 2992 3105 -167 229 279 115 49 chr2 10625956 10626078 -240061776 - L2 LINE L2 -9 3304 3175 268 359 60 28 chr2 10626284 10626501 -240061353 - MIR SINE MIR -30 232 9 354 258 92 58 chr2 10626875 10626995 -240060859 + L2 LINE L2 3141 3264 -8 284 178 14 0 chr2 10626995 10627068 -240060786 + (TCCA)n Simple_repeat Simple_repeat 2 75 0 824 162 6 0 chr2 10627106 10627273 -240060581 + (TCCA)n Simple_repeat Simple_repeat 4 171 0 333 0 0 0 chr2 10628392 10628429 -240059425 + (TG)n Simple_repeat Simple_repeat 1 37 0 520 168 112 0 chr2 10629478 10629585 -240058269 + 5S rRNA rRNA 2 120 -1 2211 43 0 18 chr2 10629731 10630010 -240057844 - AluY SINE Alu -14 297 24 2246 85 10 7 chr2 10630898 10631203 -240056651 + AluY SINE Alu 2 307 -4 2173 103 3 3 chr2 10631524 10631836 -240056018 - AluSq SINE Alu -1 312 1 231 317 17 0 chr2 10631861 10631921 -240055933 + L2 LINE L2 3141 3201 -71 1613 174 0 4 chr2 10631935 10632216 -240055638 + AluJb SINE Alu 1 280 -32 784 262 30 47 chr2 10632239 10632333 -240055521 - MIR SINE MIR -13 249 155 1578 229 92 79 chr2 10632333 10632950 -240054904 - MLT1E2 LTR MaLR -1 625 1 784 262 30 47 chr2 10632950 10633088 -240054766 - MIR SINE MIR -107 155 21 1681 184 0 7 chr2 10633181 10633490 -240054364 - AluJo SINE Alu -5 307 1 1006 93 0 7 chr2 10634315 10634455 -240053399 - MER85 DNA T2_type 0 139 1 3213 96 6 17 chr2 10635013 10635480 -240052374 + L1PA13 LINE L1 5702 6163 0 222 150 0 0 chr2 10636112 10636152 -240051702 + (CA)n Simple_repeat Simple_repeat 1 40 0 398 249 104 57 chr2 10636819 10637078 -240050776 + MLT1J LTR MaLR 1 269 -242 2070 119 27 0 chr2 10637303 10637598 -240050256 + AluSx SINE Alu 1 303 -9 391 329 43 7 chr2 10638383 10638523 -240049331 + MIR SINE MIR 3 147 -115 1214 214 43 46 chr2 10638590 10638637 -240049217 - HAL1 LINE L1 -87 2420 2374 2047 120 0 7 chr2 10638637 10638938 -240048916 - AluSx SINE Alu -13 299 1 1214 214 43 46 chr2 10638938 10639283 -240048571 - HAL1 LINE L1 -133 2374 2029 304 318 95 8 chr2 10639717 10639843 -240048011 - L2 LINE L2 0 3272 3136 822 172 15 0 chr2 10640579 10640713 -240047141 - FAM SINE Alu -16 169 34 1164 279 68 31 chr2 10641390 10641968 -240045886 + L1ME3A LINE L1 5353 5951 -219 288 186 204 115 chr2 10642039 10642122 -240045732 + MER5A DNA MER1_type 55 153 -36 1773 148 0 14 chr2 10642122 10642442 -240045412 - AluJb SINE Alu 0 316 1 288 186 204 115 chr2 10642442 10642470 -240045384 + MER5A DNA MER1_type 153 177 -12 932 75 15 0 chr2 10642534 10642667 -240045187 + AluSc SINE Alu 166 300 -9 259 148 68 34 chr2 10643524 10643612 -240044242 - L1ME4a LINE L1 -8 6113 6023 42 20 0 0 chr2 10643616 10643665 -240044189 + AT_rich Low_complexity Low_complexity 1 49 0 1865 137 3 0 chr2 10643665 10643950 -240043904 - AluSx SINE Alu -26 286 1 380 93 0 0 chr2 10643964 10644018 -240043836 - L1ME4a LINE L1 -109 6012 5959 502 281 102 12 chr2 10644926 10645093 -240042761 - MIR SINE MIR -14 248 67 195 100 0 0 chr2 10645111 10645141 -240042713 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 649 239 37 50 chr2 10645405 10645623 -240042231 - MIR SINE MIR -33 229 15 557 333 50 74 chr2 10646776 10647292 -240040562 - HAL1 LINE L1 -1519 988 485 234 0 0 0 chr2 10647464 10647490 -240040364 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 27 0 0 0 chr2 10647657 10647684 -240040170 + AT_rich Low_complexity Low_complexity 1 27 0 267 338 68 87 chr2 10648033 10648299 -240039555 - L2 LINE L2 -12 3260 3000 1930 134 3 3 chr2 10649035 10649342 -240038512 - AluSq SINE Alu -6 307 1 885 214 92 0 chr2 10649449 10649655 -240038199 - MIR SINE MIR -30 232 8 217 112 72 16 chr2 10649723 10649848 -240038006 + (TA)n Simple_repeat Simple_repeat 1 132 0 735 12 0 0 chr2 10650689 10650773 -240037081 + (TTTC)n Simple_repeat Simple_repeat 1 84 0 239 188 0 31 chr2 10650773 10650837 -240037017 + CT-rich Low_complexity Low_complexity 4 65 0 * 298 170 18 27 chr2 10650831 10650943 -240036911 + (CTTG)n Simple_repeat Simple_repeat 2 112 0 * 371 183 14 42 chr2 10650938 10651080 -240036774 + CT-rich Low_complexity Low_complexity 5 142 0 193 116 23 23 chr2 10651122 10651165 -240036689 + CT-rich Low_complexity Low_complexity 4 46 0 524 243 6 0 chr2 10651499 10651668 -240036186 + (TG)n Simple_repeat Simple_repeat 1 170 0 423 0 0 0 chr2 10652013 10652060 -240035794 + (TG)n Simple_repeat Simple_repeat 1 47 0 812 124 0 8 chr2 10652805 10652934 -240034920 + FLAM_A SINE Alu 13 140 -2 759 154 16 0 chr2 10652956 10653079 -240034775 + FRAM SINE Alu 1 117 -59 2007 69 62 0 chr2 10653164 10653452 -240034402 - AluY SINE Alu -5 306 1 225 0 0 0 chr2 10653563 10653588 -240034266 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 1932 140 0 3 chr2 10653601 10653893 -240033961 - AluSx SINE Alu -15 297 7 696 195 49 0 chr2 10654651 10654774 -240033080 - FLAM_C SINE Alu -13 130 2 254 188 21 0 chr2 10654881 10654929 -240032925 + AluY SINE Alu 119 167 -134 2095 113 0 0 chr2 10654929 10655220 -240032634 + AluSq SINE Alu 19 309 -4 436 351 71 24 chr2 10655264 10655560 -240032294 - L1ME4a LINE L1 -147 5974 5665 197 356 59 42 chr2 10655718 10655836 -240032018 + L2 LINE L2 3170 3289 -24 396 244 41 86 chr2 10655943 10656140 -240031714 - L1MC5 LINE L1 -33 7928 7741 231 338 52 13 chr2 10656242 10656396 -240031458 + MIR3 SINE MIR 32 191 -17 769 214 39 6 chr2 10656427 10656605 -240031249 + MER5A DNA MER1_type 3 186 -3 2130 120 0 0 chr2 10656834 10657134 -240030720 + AluSq SINE Alu 1 300 -13 503 225 101 7 chr2 10657259 10657397 -240030457 + L2 LINE L2 3161 3311 -2 1854 118 19 45 chr2 10657496 10657809 -240030045 + AluSg SINE Alu 1 305 -5 248 319 217 12 chr2 10658065 10658231 -240029623 - MIR SINE MIR -1 261 62 293 162 47 54 chr2 10658231 10658379 -240029475 + (TTATA)n Simple_repeat Simple_repeat 1 147 0 3736 171 14 43 chr2 10658383 10658874 -240028980 - L1MB7 LINE L1 -26 6158 5695 2216 100 0 0 chr2 10658874 10659174 -240028680 - AluSx SINE Alu -12 300 1 3736 171 14 43 chr2 10659174 10659442 -240028412 - L1MB7 LINE L1 -489 5695 5421 276 327 163 0 chr2 10659892 10660045 -240027809 + MIR SINE MIR 77 254 -8 325 239 0 0 chr2 10661456 10661523 -240026331 - MER6 DNA MER2_type 0 865 799 256 122 24 0 chr2 10661529 10661568 -240026286 + MER6 DNA MER2_type 738 777 -88 2176 104 27 99 chr2 10661568 10661933 -240025921 - MER1B DNA MER1_type 0 339 1 214 333 12 25 chr2 10662056 10662137 -240025717 - L2 LINE L2 -1 3271 3192 350 299 17 8 chr2 10662350 10662467 -240025387 - MIR SINE MIR -80 182 65 465 284 136 0 chr2 10662644 10662799 -240025055 + MER5A DNA MER1_type 14 189 0 524 261 118 33 chr2 10662986 10663197 -240024657 + MIR SINE MIR 14 242 -20 248 291 197 0 chr2 10663542 10663669 -240024185 - MIR SINE MIR -12 250 99 318 203 14 0 chr2 10663669 10663738 -240024116 - MER116 DNA Mariner -1 79 10 927 246 22 18 chr2 10663863 10664087 -240023767 - MIR SINE MIR -35 227 3 184 268 134 12 chr2 10664278 10664360 -240023494 - MIR SINE MIR -117 145 54 999 169 75 0 chr2 10664981 10665182 -240022672 - L1MD1 LINE L1 -1 6241 6026 550 151 0 0 chr2 10665185 10665271 -240022583 - FRAM SINE Alu -16 160 75 842 129 0 0 chr2 10665298 10665422 -240022432 - FLAM_C SINE Alu -19 124 1 4035 175 22 21 chr2 10665427 10666308 -240021546 - L1MD1 LINE L1 -206 6036 5152 746 112 0 0 chr2 10666309 10666416 -240021438 - AluJb SINE Alu 0 312 206 1075 199 46 42 chr2 10666417 10666723 -240021131 - L1MD1 LINE L1 -974 5172 4866 275 271 164 7 chr2 10667964 10668104 -240019750 - L1ME4a LINE L1 -16 6105 5944 1829 96 13 80 chr2 10668313 10668485 -240019369 - AluSx SINE Alu -18 294 149 2160 104 10 0 chr2 10668485 10668784 -240019070 - AluSx SINE Alu -10 302 1 1829 96 13 80 chr2 10668784 10668913 -240018941 - AluSx SINE Alu -163 149 13 2083 111 0 0 chr2 10669730 10670019 -240017835 - AluSx SINE Alu -23 289 1 2376 84 0 0 chr2 10670231 10670542 -240017312 - AluSq SINE Alu -2 311 1 1738 172 0 3 chr2 10670545 10670847 -240017007 - AluJb SINE Alu -11 301 1 305 341 98 12 chr2 10671140 10671304 -240016550 - MIR SINE MIR -65 197 20 617 297 96 33 chr2 10671679 10672043 -240015811 - L1ME4a LINE L1 -339 5827 5441 2034 222 51 27 chr2 10672175 10672702 -240015152 - MER44D DNA MER2_type 0 605 11 1733 194 144 2 chr2 10672718 10673121 -240014733 - L1MB7 LINE L1 -16 6168 5709 193 303 110 46 chr2 10673149 10673258 -240014596 - MIR SINE MIR -9 253 138 2055 114 7 0 chr2 10673265 10673555 -240014299 - AluSx SINE Alu -19 293 2 22 35 0 0 chr2 10673842 10673871 -240013983 + AT_rich Low_complexity Low_complexity 1 29 0 1655 164 3 17 chr2 10673886 10674185 -240013669 + AluJo SINE Alu 1 295 -17 304 315 111 0 chr2 10674389 10674497 -240013357 - L2 LINE L2 -1 3312 3193 2098 85 18 0 chr2 10675462 10675744 -240012110 + AluSx SINE Alu 11 297 -15 2688 39 3 3 chr2 10677188 10677499 -240010355 - AluY SINE Alu 0 311 1 1391 247 44 43 chr2 10677587 10677888 -240009966 - L1MC5 LINE L1 -46 7915 7616 2101 187 6 3 chr2 10677888 10678252 -240009602 + MLT1A1 LTR MaLR 1 365 0 1391 247 44 43 chr2 10678252 10678558 -240009296 - L1MC5 LINE L1 -345 7616 7307 770 243 11 5 chr2 10678716 10678901 -240008953 - L1MC5 LINE L1 -733 7228 7043 360 203 24 17 chr2 10679010 10679187 -240008667 + CT-rich Low_complexity Low_complexity 1 178 0 497 209 0 14 chr2 10679204 10679343 -240008511 + CT-rich Low_complexity Low_complexity 2 138 0 1886 179 7 0 chr2 10679343 10679650 -240008204 - AluJo SINE Alu -3 309 1 198 0 0 0 chr2 10680095 10680117 -240007737 + (T)n Simple_repeat Simple_repeat 1 22 0 221 327 151 62 chr2 10682067 10682425 -240005429 + L2 LINE L2 2809 3198 -74 764 244 106 5 chr2 10683684 10683901 -240003953 - MIR SINE MIR -13 249 11 2123 96 7 4 chr2 10684503 10684811 -240003043 - AluY SINE Alu 0 309 1 2220 116 3 0 chr2 10685107 10685409 -240002445 - AluSx SINE Alu -9 303 1 1860 86 19 4 chr2 10685471 10685727 -240002127 - AluSq SINE Alu -53 260 1 472 275 47 7 chr2 10685969 10686118 -240001736 + MIR SINE MIR 82 236 -26 2401 97 3 0 chr2 10686191 10686501 -240001353 + AluSx SINE Alu 1 311 -1 2222 104 10 0 chr2 10687239 10687538 -240000316 - AluSx SINE Alu -10 302 1 317 260 67 80 chr2 10687593 10687743 -240000111 + MIR SINE MIR 50 197 -65 256 229 57 51 chr2 10688017 10688192 -239999662 - HAL1 LINE L1 -121 2386 2211 1834 152 24 3 chr2 10688195 10688485 -239999369 + AluJo SINE Alu 1 296 -16 339 261 0 0 chr2 10688554 10688688 -239999166 + (CA)n Simple_repeat Simple_repeat 1 134 0 250 230 0 40 chr2 10688690 10688764 -239999090 - HAL1 LINE L1 -285 2222 2152 1778 241 161 14 chr2 10688810 10689547 -239998307 - HAL1 LINE L1 -485 2022 1177 956 244 243 54 chr2 10689882 10690232 -239997622 - HAL1 LINE L1 -1324 1183 900 2173 119 10 3 chr2 10690232 10690543 -239997311 + AluSq SINE Alu 1 313 0 956 244 243 54 chr2 10690543 10691187 -239996667 - HAL1 LINE L1 -1607 900 1 384 248 19 9 chr2 10691553 10691658 -239996196 + HAL1 LINE L1 742 847 -1660 528 58 0 0 chr2 10692002 10692071 -239995783 + tRNA-Glu-GAG tRNA tRNA 7 75 0 231 279 24 55 chr2 10692326 10692439 -239995415 - MIR SINE MIR -41 167 57 231 283 20 50 chr2 10692771 10692870 -239994984 + MIR3 SINE MIR 83 178 -30 2692 20 3 0 chr2 10693024 10693321 -239994533 + AluY SINE Alu 1 298 -13 1542 146 120 18 chr2 10693525 10693800 -239994054 + AluJb SINE Alu 1 303 -9 388 287 52 32 chr2 10695225 10695594 -239992260 + L1M4 LINE L1 2853 3228 -2918 339 281 60 126 chr2 10695601 10695848 -239992006 + L1ME4a LINE L1 5745 5958 -163 1645 173 55 14 chr2 10695848 10696194 -239991660 + L1MB8 LINE L1 5819 6178 0 339 281 60 126 chr2 10696194 10696344 -239991510 + L1ME4a LINE L1 5958 6116 -5 197 338 54 0 chr2 10700320 10700394 -239987460 + L3 LINE CR1 1023 1100 -477 546 326 28 11 chr2 10700398 10700576 -239987278 - MIR3 SINE MIR -12 196 16 2340 116 0 0 chr2 10700713 10701014 -239986840 + AluSq SINE Alu 1 301 -12 465 35 0 0 chr2 10701488 10701545 -239986309 + U2 snRNA snRNA 1 57 -131 2476 79 0 3 chr2 10701656 10701959 -239985895 - AluSq SINE Alu -11 302 1 891 78 0 0 chr2 10701959 10702074 -239985780 - 5S rRNA rRNA -6 115 1 283 336 21 28 chr2 10702148 10702291 -239985563 + MIR SINE MIR 2 143 -119 190 208 42 21 chr2 10702313 10702361 -239985493 - L2 LINE L2 -7 3306 3258 239 300 189 14 chr2 10702415 10702581 -239985273 + MIR SINE MIR 2 197 -56 2444 92 7 0 chr2 10703263 10703567 -239984287 - AluSx SINE Alu -6 306 1 329 313 23 46 chr2 10703843 10703974 -239983880 + MIR SINE MIR 16 143 -65 247 167 24 0 chr2 10704004 10704046 -239983808 - L2 LINE L2 -13 3300 3258 507 249 34 91 chr2 10704230 10704495 -239983359 - L2 LINE L2 -188 3084 2835 725 150 24 16 chr2 10704693 10704820 -239983034 + FLAM_A SINE Alu 1 128 -5 2141 157 36 14 chr2 10705047 10705403 -239982451 - THE1B LTR MaLR 0 364 1 320 294 119 0 chr2 10705408 10705517 -239982337 + MIR SINE MIR 27 148 -114 2048 135 7 0 chr2 10706329 10706610 -239981244 - AluSx SINE Alu -29 283 1 2105 120 0 3 chr2 10707398 10707718 -239980136 - AluSx SINE Alu 0 319 1 333 250 150 8 chr2 10707720 10707840 -239980014 - MIR SINE MIR -97 165 29 199 314 209 0 chr2 10708112 10708217 -239979637 + MIR3 SINE MIR 30 156 -52 213 299 113 0 chr2 10709750 10709847 -239978007 - L2 LINE L2 -188 3084 2977 373 311 254 0 chr2 10709871 10710064 -239977790 - MIR SINE MIR 0 262 21 840 242 44 54 chr2 10710270 10710420 -239977434 - L1MC5 LINE L1 -114 7847 7697 2068 135 27 0 chr2 10710420 10710716 -239977138 + AluSq SINE Alu 1 304 -9 840 242 44 54 chr2 10710716 10710970 -239976884 - L1MC5 LINE L1 -264 7697 7447 185 356 38 38 chr2 10710993 10711125 -239976729 - L2 LINE L2 -590 2724 2593 2453 64 0 3 chr2 10712006 10712304 -239975550 - AluY SINE Alu -14 297 1 222 321 37 79 chr2 10712779 10712969 -239974885 - MIR3 SINE MIR -7 201 20 441 287 19 93 chr2 10713095 10713311 -239974543 + MIR SINE MIR 49 248 -14 263 286 124 5 chr2 10713329 10713441 -239974413 - MIR SINE MIR -68 140 20 1555 131 0 14 chr2 10716397 10716618 -239971236 + AluSq SINE Alu 83 300 -13 2103 113 3 0 chr2 10717047 10717360 -239970494 + AluSx SINE Alu 1 314 0 746 230 78 10 chr2 10717452 10717656 -239970198 + MER20 DNA MER1_type 2 219 0 227 324 14 0 chr2 10718063 10718134 -239969720 - L2 LINE L2 -5 3267 3196 226 361 30 24 chr2 10719087 10719256 -239968598 - MIR SINE MIR -34 228 59 510 323 25 6 chr2 10719592 10719750 -239968104 + MIR SINE MIR 38 198 -64 837 265 36 9 chr2 10719769 10719988 -239967866 - MIR SINE MIR -24 238 14 2620 116 8 0 chr2 10720191 10720552 -239967302 - THE1B LTR MaLR 0 364 1 216 292 0 0 chr2 10720710 10720823 -239967031 + (TG)n Simple_repeat Simple_repeat 2 114 0 302 333 175 6 chr2 10721447 10721630 -239966224 + MIR SINE MIR 15 228 -34 239 284 168 0 chr2 10721688 10721783 -239966071 - L2 LINE L2 -256 3057 2947 350 258 54 0 chr2 10722010 10722103 -239965751 - MIR3 SINE MIR -7 201 104 248 320 41 67 chr2 10723829 10723871 -239963983 - MER5A DNA MER1_type 0 189 147 2326 99 3 0 chr2 10723871 10724164 -239963690 + AluSq SINE Alu 1 294 -19 248 320 41 67 chr2 10724164 10724315 -239963539 - MER5A DNA MER1_type -42 147 1 521 309 30 24 chr2 10724324 10724492 -239963362 - MER5B DNA MER1_type -2 176 8 208 238 0 0 chr2 10724828 10724870 -239962984 + (ATG)n Simple_repeat Simple_repeat 1 42 0 996 36 0 0 chr2 10725008 10725118 -239962736 + 7SLRNA srpRNA srpRNA 91 200 -120 204 216 0 0 chr2 10725484 10725535 -239962319 + (TG)n Simple_repeat Simple_repeat 2 52 0 374 359 43 17 chr2 10725543 10725777 -239962077 + L3 LINE CR1 1336 1575 -2 238 301 124 9 chr2 10726334 10726447 -239961407 - L2 LINE L2 -1 3271 3146 267 252 50 101 chr2 10727539 10727698 -239960156 + MER5A DNA MER1_type 3 153 -36 432 0 0 0 chr2 10727840 10727888 -239959966 + (CA)n Simple_repeat Simple_repeat 2 49 0 252 356 11 0 chr2 10727947 10728037 -239959817 - MIR SINE MIR -122 140 50 2239 110 3 10 chr2 10728089 10728389 -239959465 + AluSx SINE Alu 1 298 -14 241 233 151 27 chr2 10728587 10728660 -239959194 + MIR3 SINE MIR 81 162 -46 494 289 263 25 chr2 10729279 10730315 -239957539 - L2 LINE L2 -15 3298 2013 488 307 151 9 chr2 10730553 10730872 -239956982 + L2 LINE L2 2854 3217 -96 419 305 175 7 chr2 10731002 10731294 -239956560 - L2 LINE L2 -1297 2017 1677 183 291 157 37 chr2 10731372 10731506 -239956348 - MIR SINE MIR -64 198 49 291 316 107 43 chr2 10731573 10731807 -239956047 + L1ME LINE L1 5341 5589 -532 222 37 0 0 chr2 10732322 10732349 -239955505 + (T)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr2 10732474 10732497 -239955357 + AT_rich Low_complexity Low_complexity 1 23 0 1888 115 70 4 chr2 10733638 10733908 -239953946 - AluJb SINE Alu -24 288 1 315 299 73 15 chr2 10733909 10734046 -239953808 - L2 LINE L2 0 3313 3169 1873 149 3 24 chr2 10734152 10734448 -239953406 - AluJo SINE Alu -21 291 2 2344 120 0 0 chr2 10734493 10734794 -239953060 - AluSx SINE Alu -11 301 1 2352 91 0 7 chr2 10734824 10735133 -239952721 - AluY SINE Alu -4 307 1 29 0 0 0 chr2 10735133 10735162 -239952692 + AT_rich Low_complexity Low_complexity 1 29 0 332 340 137 0 chr2 10735196 10735349 -239952505 - MIR SINE MIR -19 243 70 207 292 52 117 chr2 10735898 10736206 -239951648 + L2 LINE L2 2977 3264 -8 281 330 44 0 chr2 10738231 10738322 -239949532 - MIR SINE MIR -61 147 53 218 314 14 0 chr2 10738700 10738770 -239949084 + L2 LINE L2 3201 3271 -1 304 281 42 99 chr2 10739156 10739348 -239948506 - MIR3 SINE MIR -24 184 4 1349 111 0 0 chr2 10739469 10739649 -239948205 - AluY SINE Alu -2 309 130 2667 49 0 3 chr2 10739651 10739959 -239947895 - AluY SINE Alu -4 307 1 497 276 99 58 chr2 10741813 10742056 -239945798 - MIR SINE MIR -4 258 6 691 318 17 9 chr2 10743045 10743278 -239944576 - MIR SINE MIR -12 250 16 327 268 49 0 chr2 10743291 10743373 -239944481 - MIR SINE MIR -62 146 61 256 355 103 0 chr2 10743584 10743691 -239944163 + MER103 DNA DNA 2 119 -47 726 326 26 0 chr2 10743942 10744175 -239943679 - MIR SINE MIR -22 240 2 184 296 19 0 chr2 10744251 10744305 -239943549 + MIR SINE MIR 87 141 -67 660 286 162 0 chr2 10744376 10744586 -239943268 + MIR SINE MIR 17 260 -2 426 262 19 9 chr2 10744736 10744843 -239943011 - MIR3 SINE MIR -32 176 69 294 29 0 0 chr2 10745281 10745316 -239942538 + (T)n Simple_repeat Simple_repeat 1 35 0 2389 104 0 0 chr2 10745365 10745663 -239942191 - AluSg SINE Alu -12 298 1 2580 219 68 18 chr2 10745730 10746184 -239941670 - L1ME1 LINE L1 -134 6101 5602 1183 210 17 17 chr2 10746184 10746422 -239941432 + MER8 DNA MER2_type 2 239 0 2580 219 68 18 chr2 10746422 10746632 -239941222 - L1ME1 LINE L1 -633 5602 5404 693 241 14 0 chr2 10746624 10746876 -239940978 - L1ME1 LINE L1 -3712 2503 2240 * 2275 100 0 0 chr2 10746898 10747220 -239940634 - AluSc SINE Alu 0 322 1 1272 186 73 0 chr2 10747259 10747479 -239940375 - AluJo SINE Alu -48 264 29 366 222 0 0 chr2 10747484 10747565 -239940289 - L1ME1 LINE L1 -5250 1146 1066 304 231 0 0 chr2 10747695 10747747 -239940107 - L1MC4 LINE L1 -1339 6703 6652 409 228 53 32 chr2 10747752 10747895 -239939959 - L1MC4 LINE L1 -1339 6983 1932 355 171 26 13 chr2 10747953 10748029 -239939825 - MLT1K LTR MaLR -2 586 510 3565 228 70 16 chr2 10748388 10749376 -239938478 - L1ME1 LINE L1 -5321 1075 35 1689 122 0 17 chr2 10749441 10749711 -239938143 - AluSx SINE Alu 0 322 57 285 180 0 0 chr2 10750593 10750643 -239937211 - L2 LINE L2 -2 3311 3262 1679 174 28 0 chr2 10751511 10751793 -239936061 - AluJo SINE Alu -12 300 11 242 188 0 0 chr2 10751949 10751997 -239935857 + L2 LINE L2 3247 3294 -19 2391 94 0 0 chr2 10752110 10752408 -239935446 + AluSx SINE Alu 1 298 -14 204 322 66 13 chr2 10752889 10753041 -239934813 + MER91B DNA MER1_type 27 186 -4 446 317 0 25 chr2 10753548 10753709 -239934145 - MIR SINE MIR -3 259 103 405 306 0 41 chr2 10754295 10754324 -239933530 - MIR SINE MIR -72 190 161 2378 103 0 0 chr2 10754324 10754625 -239933229 - AluSx SINE Alu -11 301 1 405 306 0 41 chr2 10754625 10754742 -239933112 - MIR SINE MIR -101 161 50 180 0 0 0 chr2 10754749 10754769 -239933085 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2208 54 0 0 chr2 10754771 10755030 -239932824 - AluY SINE Alu -21 290 32 220 171 0 0 chr2 10756151 10756192 -239931662 + MIR SINE MIR 107 147 -115 494 330 63 33 chr2 10759753 10760070 -239927784 - L1MC/D LINE L1 -743 5403 5188 2375 82 0 0 chr2 10760169 10760462 -239927392 - AluSc SINE Alu -4 305 13 216 268 122 0 chr2 10762206 10762288 -239925566 + MIR SINE MIR 124 215 -47 2056 145 0 0 chr2 10762291 10762580 -239925274 - AluSx SINE Alu -23 289 1 6145 154 50 18 chr2 10763269 10763808 -239924046 + Tigger3b DNA MER2_type 2 523 -2505 2215 109 6 40 chr2 10763808 10764129 -239923725 + AluSx SINE Alu 1 310 -2 6145 154 50 18 chr2 10764129 10764538 -239923316 + Tigger3b DNA MER2_type 523 918 -2110 2479 92 0 0 chr2 10764538 10764844 -239923010 - AluSq SINE Alu -7 306 1 6145 154 50 18 chr2 10764844 10764915 -239922939 + Tigger3b DNA MER2_type 918 985 -2043 1363 89 84 5 chr2 10764915 10765128 -239922726 - MER30 DNA MER1_type 0 230 1 6145 154 50 18 chr2 10765128 10765299 -239922555 + Tigger3b DNA MER2_type 985 1231 0 1999 122 47 36 chr2 10765992 10766352 -239921502 - THE1B LTR MaLR 0 364 1 2367 119 0 0 chr2 10766505 10766815 -239921039 + AluSx SINE Alu 1 310 -2 188 318 0 0 chr2 10767584 10767628 -239920226 - L2 LINE L2 -8 3305 3262 256 220 0 17 chr2 10767778 10767837 -239920017 - L2 LINE L2 -19 3294 3237 311 227 15 0 chr2 10769602 10769668 -239918186 + MIR SINE MIR 110 176 -86 426 326 63 27 chr2 10770445 10770666 -239917188 + MIR SINE MIR 24 252 -10 524 281 12 24 chr2 10770722 10770889 -239916965 - L1MC5 LINE L1 -68 7893 7729 1261 247 162 5 chr2 10771676 10772089 -239915765 - MLT1H LTR MaLR -71 478 1 2285 119 3 0 chr2 10772527 10772837 -239915017 - AluSx SINE Alu -1 311 1 2559 62 0 7 chr2 10773480 10773788 -239914066 + AluY SINE Alu 1 306 -5 376 297 108 18 chr2 10773829 10774051 -239913803 - L1ME3A LINE L1 -18 6152 5911 247 306 171 9 chr2 10774053 10774164 -239913690 + MIR SINE MIR 114 242 -20 294 306 33 33 chr2 10774974 10775095 -239912759 + MIR SINE MIR 20 140 -122 422 256 0 0 chr2 10776913 10776999 -239910855 + G-rich Low_complexity Low_complexity 89 174 0 618 245 0 0 chr2 10776999 10777302 -239910552 + (CAGAGA)n Simple_repeat Simple_repeat 1 303 0 546 227 109 32 chr2 10978105 10978310 -239709544 - MIR SINE MIR -1 261 44 6651 92 16 16 chr2 10978881 10979965 -239707889 + SVA Other Other 433 1360 -26 661 11 0 23 chr2 10979965 10980053 -239707801 + (GAAA)n Simple_repeat Simple_repeat 4 89 0 255 315 56 19 chr2 10980053 10980161 -239707693 + MIR3 SINE MIR 74 185 -23 222 278 130 9 chr2 10980257 10980365 -239707489 - MIR3 SINE MIR -31 177 57 3083 160 25 27 chr2 10980688 10981289 -239706565 + L1MB2 LINE L1 5444 6043 -128 493 111 0 0 chr2 10981289 10981358 -239706496 + L1MB3 LINE L1 6107 6178 -5 312 236 109 86 chr2 10981573 10981643 -239706211 + L1ME4a LINE L1 5840 5907 -214 2453 77 3 3 chr2 10981643 10981953 -239705901 - AluY SINE Alu -1 310 1 312 236 109 86 chr2 10981953 10982056 -239705798 + L1ME4a LINE L1 5907 6017 -104 233 292 45 11 chr2 10982257 10982346 -239705508 + L3 LINE CR1 1483 1574 -3 619 255 71 38 chr2 10982725 10982909 -239704945 + MIR SINE MIR 1 190 -72 1706 89 114 8 chr2 10983947 10984183 -239703671 - AluSq SINE Alu -48 265 5 188 307 79 50 chr2 10984371 10984472 -239703382 + L2 LINE L2 3137 3240 -32 188 179 89 18 chr2 10984507 10984563 -239703291 + MIR SINE MIR 85 144 -64 494 267 67 39 chr2 10985029 10985209 -239702645 + MIR SINE MIR 49 233 -29 252 356 23 0 chr2 10985294 10985381 -239702473 + MIR SINE MIR 58 146 -116 2057 125 0 0 chr2 10985531 10985862 -239701992 - AluSx SINE Alu 0 331 1 2294 206 62 16 chr2 10987095 10987673 -239700181 - MER21B LTR ERV1 -58 805 201 352 149 9 167 chr2 10987895 10988009 -239699845 - MER21B LTR ERV1 -767 96 1 270 307 104 50 chr2 10988196 10988398 -239699456 - L2 LINE L2 -1047 2267 2055 180 0 0 0 chr2 10989182 10989202 -239698652 + (GTGTG)n Simple_repeat Simple_repeat 1 20 0 202 206 0 0 chr2 10989622 10989656 -239698198 + polypyrimidine Low_complexity Low_complexity 1 34 0 679 305 93 14 chr2 10989656 10990020 -239697834 - L1ME LINE L1 -392 5729 5337 355 276 55 24 chr2 10990917 10991044 -239696810 + MIR SINE MIR 3 133 -129 498 240 116 45 chr2 10991680 10992033 -239695821 + MLT1I LTR MaLR 3 407 -2 2066 119 3 48 chr2 10992128 10992438 -239695416 - AluSq SINE Alu -17 296 1 493 330 36 26 chr2 10992619 10992813 -239695041 - MIR SINE MIR -21 241 46 1664 143 87 3 chr2 10992909 10993195 -239694659 + AluJo SINE Alu 1 310 -2 291 323 108 54 chr2 10993196 10993419 -239694435 + L2 LINE L2 3036 3270 -2 1042 255 19 19 chr2 10993467 10993726 -239694128 + MIR SINE MIR 1 259 -3 295 268 175 0 chr2 10993854 10993951 -239693903 + MIR3 SINE MIR 2 115 -93 311 285 143 36 chr2 10995589 10996025 -239691829 - L1MC/D LINE L1 -315 5806 5317 2844 0 0 0 chr2 10996048 10996345 -239691509 - AluYa5 SINE Alu -14 297 1 221 333 0 27 chr2 10998383 10998458 -239689396 - MIR SINE MIR -120 88 16 2530 43 33 7 chr2 10998580 10998880 -239688974 - AluY SINE Alu -3 308 1 2291 103 0 0 chr2 10999334 10999634 -239688220 - AluY SINE Alu -11 300 1 1987 112 38 45 chr2 10999990 11000304 -239687550 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 11000942 11000967 -239686887 + GC_rich Low_complexity Low_complexity 1 25 0 217 73 24 24 chr2 11001099 11001140 -239686714 + (CGGGGG)n Simple_repeat Simple_repeat 1 41 0 622 313 66 28 chr2 11001762 11001978 -239685876 - L2 LINE L2 -235 3037 2831 1889 165 0 3 chr2 11001978 11002269 -239685585 - AluJo SINE Alu -22 290 1 622 313 66 28 chr2 11002269 11002515 -239685339 - L2 LINE L2 -441 2831 2480 276 279 13 13 chr2 11004511 11004590 -239683264 - L2 LINE L2 -44 3228 3150 220 209 224 0 chr2 11005310 11005377 -239682477 - MIR3 SINE MIR -21 187 106 805 144 14 7 chr2 11005377 11005516 -239682338 - MER7A DNA MER2_type -208 138 1 262 250 201 61 chr2 11005544 11005708 -239682146 + MIR SINE MIR 15 201 -61 272 61 0 0 chr2 11005802 11005840 -239682014 + FLAM_A SINE Alu 66 99 -34 535 105 35 35 chr2 11005840 11005855 -239681999 - AluJb SINE Alu -165 147 133 1590 86 5 0 chr2 11005855 11006082 -239681772 - AluY SINE Alu 0 311 84 535 105 35 35 chr2 11006082 11006151 -239681703 - AluJb SINE Alu -178 134 62 1831 158 0 11 chr2 11006945 11007268 -239680586 - AluSx SINE Alu 0 348 29 2785 176 4 23 chr2 11007284 11007801 -239680053 + MLT2B2 LTR ERVL 1 507 -8 1426 234 20 8 chr2 11007845 11008242 -239679612 - L1MEc LINE L1 -5455 941 540 461 203 155 35 chr2 11008248 11008480 -239679374 - MLT1F1 LTR MaLR -13 554 295 481 195 44 18 chr2 11009400 11009513 -239678341 - MER45A DNA AcHobo -4 174 59 232 236 146 24 chr2 11009557 11009680 -239678174 + L2 LINE L2 2953 3090 -182 384 308 112 83 chr2 11009938 11010404 -239677450 - L2 LINE L2 -181 3091 2580 1848 142 7 37 chr2 11010404 11010699 -239677155 + AluJb SINE Alu 3 288 -24 384 308 112 83 chr2 11010699 11011080 -239676774 - L2 LINE L2 -692 2580 2211 25 0 0 0 chr2 11011159 11011184 -239676670 + AT_rich Low_complexity Low_complexity 1 25 0 1899 186 96 26 chr2 11011345 11011682 -239676172 - MLT1D LTR MaLR -2 503 124 2505 83 39 30 chr2 11011682 11012043 -239675811 + THE1B LTR MaLR 1 364 0 1899 186 96 26 chr2 11012043 11012163 -239675691 - MLT1D LTR MaLR -381 124 14 1717 179 93 75 chr2 11012621 11012957 -239674897 + MLT2B1 LTR ERVL 1 350 -170 2332 113 3 3 chr2 11012957 11013267 -239674587 - AluSq SINE Alu -3 310 1 1717 179 93 75 chr2 11013267 11013433 -239674421 + MLT2B1 LTR ERVL 350 512 -8 248 289 16 66 chr2 11013577 11013698 -239674156 - MER5B DNA MER1_type -59 119 5 603 231 6 58 chr2 11014525 11014681 -239673173 - MER5A DNA MER1_type 0 189 42 184 250 119 24 chr2 11014694 11014778 -239673076 - MIR3 SINE MIR -27 181 90 203 310 56 0 chr2 11015807 11015878 -239671976 + MIR SINE MIR 174 248 -14 2540 137 3 3 chr2 11016044 11016408 -239671446 + THE1B LTR MaLR 1 364 0 1964 135 10 3 chr2 11017114 11017402 -239670452 + AluSx SINE Alu 1 290 -22 706 228 204 0 chr2 11017406 11017617 -239670237 - MIR SINE MIR 0 262 9 222 208 132 0 chr2 11017781 11017834 -239670020 + L2 LINE L2 3213 3272 0 1066 83 0 0 chr2 11017900 11018032 -239669822 + AluY SINE Alu 1 132 -179 536 15 0 0 chr2 11018035 11018101 -239669753 - L1PA5 LINE L1 -1962 4184 4119 10146 30 5 2 chr2 11018101 11020069 -239667785 + L1PA5 LINE L1 4169 6143 -11 225 140 70 0 chr2 11020082 11020139 -239667715 + A-rich Low_complexity Low_complexity 4 64 0 1322 103 6 0 chr2 11020261 11020436 -239667418 + AluY SINE Alu 119 294 -17 1537 124 62 4 chr2 11020499 11020756 -239667098 - Tigger3(Golem) DNA MER2_type 0 3029 2758 254 290 94 43 chr2 11022264 11022609 -239665245 - L2 LINE L2 -227 3086 2718 370 314 179 40 chr2 11022638 11022650 -239665204 - L2 LINE L2 -775 2539 2530 1718 139 45 35 chr2 11022650 11022938 -239664916 + AluJo SINE Alu 1 291 -21 370 314 179 40 chr2 11022938 11023148 -239664706 - L2 LINE L2 -784 2530 2286 235 331 41 0 chr2 11023171 11023292 -239664562 - L2 LINE L2 -1459 1855 1730 248 263 25 0 chr2 11023409 11023489 -239664365 - L1MC4 LINE L1 0 8042 7961 767 334 168 18 chr2 11023504 11024498 -239663356 - L2 LINE L2 -1612 1702 560 389 279 155 23 chr2 11024700 11024848 -239663006 + MIR SINE MIR 14 202 -60 2684 135 31 2 chr2 11024848 11025262 -239662592 - MSTB LTR MaLR 0 426 1 389 279 155 23 chr2 11025262 11025332 -239662522 + MIR SINE MIR 202 261 -1 2384 144 0 6 chr2 11025539 11025878 -239661976 - MER1B DNA MER1_type 0 337 1 1359 192 39 88 chr2 11026302 11026575 -239661279 + MLT1B LTR MaLR 4 252 -138 2115 119 68 34 chr2 11026575 11026638 -239661216 - THE1B LTR MaLR 0 364 305 1918 121 13 64 chr2 11026638 11026952 -239660902 + AluSx SINE Alu 1 298 -14 2115 119 68 34 chr2 11026952 11027240 -239660614 - THE1B LTR MaLR -59 305 1 1359 192 39 88 chr2 11027240 11027373 -239660481 + MLT1B LTR MaLR 252 390 0 229 260 0 41 chr2 11027475 11027548 -239660306 + L2 LINE L2 3015 3084 -188 530 236 39 48 chr2 11027726 11027934 -239659920 + L2 LINE L2 3108 3313 0 291 256 22 0 chr2 11028672 11028762 -239659092 + MIR SINE MIR 60 151 -111 182 225 0 0 chr2 11028789 11028829 -239659025 + MIR SINE MIR 216 255 -7 297 0 0 0 chr2 11029799 11029832 -239658022 + (TG)n Simple_repeat Simple_repeat 2 34 0 256 172 35 0 chr2 11030702 11030760 -239657094 + MIR SINE MIR 89 148 -114 291 157 0 0 chr2 11031136 11031187 -239656667 + T-rich Low_complexity Low_complexity 1 51 0 562 339 25 29 chr2 11031977 11032254 -239655600 + HERVL LTR ERVL 4739 5014 -640 2226 122 23 0 chr2 11032254 11032557 -239655297 + AluSx SINE Alu 1 310 -2 920 223 110 43 chr2 11033101 11033446 -239654408 + LTR16A1 LTR ERVL 90 457 0 1572 199 41 33 chr2 11033894 11034116 -239653738 - MLT1A1 LTR MaLR 0 365 137 1927 141 44 44 chr2 11034116 11034479 -239653375 + THE1B LTR MaLR 1 363 -1 1572 199 41 33 chr2 11034479 11034618 -239653236 - MLT1A1 LTR MaLR -228 137 1 395 271 132 0 chr2 11034825 11034969 -239652885 - MIR SINE MIR -11 251 89 1004 215 121 69 chr2 11035016 11035421 -239652433 - MLT1H LTR MaLR 0 549 124 393 207 122 63 chr2 11035560 11035831 -239652023 - L1ME4a LINE L1 -23 6098 5812 2363 83 0 0 chr2 11036765 11037055 -239650799 + AluY SINE Alu 1 290 -21 202 214 14 57 chr2 11037750 11037820 -239650034 + GA-rich Low_complexity Low_complexity 1 67 0 2435 72 3 0 chr2 11038370 11038677 -239649177 + AluYa5 SINE Alu 1 308 -3 184 312 43 36 chr2 11039579 11039717 -239648137 + L2 LINE L2 2684 2822 -492 2678 209 149 66 chr2 11040081 11041217 -239646637 - L1MC4a LINE L1 -155 7653 6424 320 182 0 30 chr2 11041217 11041283 -239646571 - MER2 DNA MER2_type 0 345 282 * 337 203 13 38 chr2 11041256 11041335 -239646519 - MER8 DNA MER2_type -60 179 103 587 272 48 37 chr2 11041356 11041624 -239646230 - L1MC3 LINE L1 -1454 6331 6061 809 217 81 72 chr2 11041633 11041787 -239646067 - L1MCc LINE L1 -4034 3088 2937 1634 165 36 11 chr2 11041787 11042066 -239645788 - AluJb SINE Alu -26 286 1 809 217 81 72 chr2 11042066 11042257 -239645597 - L1MCc LINE L1 -4185 2937 2740 * 1653 93 4 0 chr2 11042244 11042480 -239645374 - L1P LINE L1 -846 5300 5064 1843 53 4 29 chr2 11042480 11042724 -239645130 + L1PA8 LINE L1 5934 6171 -1 327 320 92 7 chr2 11042726 11042879 -239644975 - L1MCc LINE L1 -4366 2756 2591 901 254 5 20 chr2 11042881 11043082 -239644772 + MER58A DNA MER1_type 3 200 -24 335 180 26 203 chr2 11043086 11043397 -239644457 - L1MCc LINE L1 -4870 2102 1826 1323 227 80 75 chr2 11043435 11044432 -239643422 - L1MCc LINE L1 -4914 1509 821 6814 63 10 27 chr2 11044467 11045509 -239642345 - L1PA8 LINE L1 -16 6156 5111 830 244 29 29 chr2 11045517 11045763 -239642091 - Charlie4 DNA MER1_type -1698 263 18 283 223 54 95 chr2 11045861 11046009 -239641845 + MIR SINE MIR 110 251 -11 276 30 0 0 chr2 11046270 11046303 -239641551 + (TC)n Simple_repeat Simple_repeat 2 34 0 216 67 0 0 chr2 11046302 11046332 -239641522 + (TG)n Simple_repeat Simple_repeat 1 30 0 * 2113 123 14 0 chr2 11046890 11047182 -239640672 - AluSx SINE Alu -16 296 1 345 312 9 9 chr2 11047318 11047427 -239640427 - MIR SINE MIR -81 127 19 2442 186 53 28 chr2 11047759 11048301 -239639553 - MER67C LTR ERV1 -153 557 2 2481 86 0 0 chr2 11048400 11048701 -239639153 + AluSx SINE Alu 1 301 -11 1623 186 46 25 chr2 11049618 11049984 -239637870 - MLT1A2 LTR MaLR 0 374 1 7460 45 3 1 chr2 11050472 11051786 -239636068 + L1PA7 LINE L1 4838 6154 0 1034 233 137 22 chr2 11051873 11052319 -239635535 + L1MEc LINE L1 36 532 -5864 462 264 66 47 chr2 11052346 11052604 -239635250 + MLT1F1 LTR MaLR 16 278 -289 335 158 20 48 chr2 11052959 11053105 -239634749 + C-rich Low_complexity Low_complexity 3 144 0 614 305 88 44 chr2 11053182 11053681 -239634173 + LTR33 LTR ERVL 1 521 0 225 325 13 0 chr2 11053793 11053870 -239633984 - L3 LINE CR1 -440 1137 1060 1965 204 71 14 chr2 11053870 11054379 -239633475 - MER67A LTR ERV1 0 543 6 268 328 25 17 chr2 11054735 11054854 -239633000 + CT-rich Low_complexity Low_complexity 5 124 0 327 288 27 18 chr2 11056275 11056386 -239631468 + MIR SINE MIR 36 147 -61 196 317 0 0 chr2 11056562 11056622 -239631232 - MIR3 SINE MIR -5 203 144 183 286 43 29 chr2 11056692 11056762 -239631092 + MIR SINE MIR 72 142 -66 2054 136 3 3 chr2 11056932 11057249 -239630605 - AluSg SINE Alu 0 310 3 198 295 267 23 chr2 11057272 11057489 -239630365 - L3 LINE CR1 -222 1355 1086 1975 69 8 2 chr2 11057510 11057775 -239630079 - L1MC/D LINE L1 -598 5556 5320 180 333 0 0 chr2 11058216 11058264 -239629590 + MIR SINE MIR 84 131 -77 2137 118 0 20 chr2 11058272 11058578 -239629276 - AluY SINE Alu -11 300 1 491 237 129 46 chr2 11058939 11059133 -239628721 - MIR SINE MIR -1 261 52 44678 43 5 2 chr2 11059305 11065446 -239622408 - L1PA4 LINE L1 0 6155 1 2222 127 3 0 chr2 11065449 11065757 -239622097 - AluSc SINE Alu 0 309 1 297 0 0 0 chr2 11066066 11066099 -239621755 + (TG)n Simple_repeat Simple_repeat 2 34 0 37 62 0 0 chr2 11066232 11066297 -239621557 + AT_rich Low_complexity Low_complexity 1 65 0 294 314 81 33 chr2 11066997 11067207 -239620647 + HAL1b LINE L1 310 529 -819 189 315 16 55 chr2 11067813 11067940 -239619914 + MIR SINE MIR 138 259 -3 269 309 34 40 chr2 11068510 11068659 -239619195 + MIR SINE MIR 38 185 -77 367 292 33 30 chr2 11068972 11069162 -239618692 + MIR SINE MIR 27 212 -50 1297 164 72 23 chr2 11069265 11069569 -239618285 + LTR37A LTR ERV1 87 405 -21 432 0 0 0 chr2 11070258 11070306 -239617548 + (CA)n Simple_repeat Simple_repeat 1 48 0 2018 183 19 19 chr2 11070410 11070777 -239617077 + MLT2D LTR ERVL 3 369 -45 343 239 0 83 chr2 11072633 11072742 -239615112 - MER5B DNA MER1_type -78 100 1 606 163 34 88 chr2 11073025 11073127 -239614727 - L1MA7 LINE L1 -58 6233 6138 1906 147 0 11 chr2 11073127 11073434 -239614420 + AluSx SINE Alu 1 304 0 606 163 34 88 chr2 11073434 11073476 -239614378 - L1MA7 LINE L1 -153 6138 6095 261 183 0 61 chr2 11073479 11073561 -239614293 + L1MA8 LINE L1 6211 6287 -4 724 285 64 26 chr2 11074674 11074872 -239612982 - L2 LINE L2 -1313 2001 1812 1702 205 36 0 chr2 11074872 11075203 -239612651 + MER2 DNA MER2_type 1 343 -1 724 285 64 26 chr2 11075203 11075425 -239612429 - L2 LINE L2 -1502 1812 1565 182 194 15 0 chr2 11075708 11075775 -239612079 + (CA)n Simple_repeat Simple_repeat 2 69 0 340 263 105 60 chr2 11075802 11076068 -239611786 + HAL1 LINE L1 777 1054 -1453 360 331 115 41 chr2 11076074 11076412 -239611442 + HAL1 LINE L1 1750 2112 -395 435 263 71 53 chr2 11076429 11076695 -239611159 + HAL1 LINE L1 2235 2505 -2 219 329 0 13 chr2 11076725 11076801 -239611053 + GA-rich Low_complexity Low_complexity 2 76 0 750 306 34 0 chr2 11077264 11077529 -239610325 + L2 LINE L2 2137 2410 -904 389 296 129 34 chr2 11077597 11077830 -239610024 + L2 LINE L2 2991 3245 -68 309 290 74 31 chr2 11077909 11078172 -239609682 - MLT1I LTR MaLR -69 381 64 293 323 86 0 chr2 11079014 11079107 -239608747 + MIR SINE MIR 57 157 -105 2214 121 0 22 chr2 11079302 11079617 -239608237 + AluSg SINE Alu 1 308 -2 266 349 92 13 chr2 11079817 11079969 -239607885 + Tigger8 DNA MER2_type 1 164 -502 1943 120 62 17 chr2 11081136 11081427 -239606427 - AluSx SINE Alu -8 304 1 23 33 0 0 chr2 11081507 11081537 -239606317 + AT_rich Low_complexity Low_complexity 1 30 0 195 146 0 0 chr2 11082367 11082408 -239605446 + (CA)n Simple_repeat Simple_repeat 1 41 0 706 212 88 6 chr2 11082730 11082900 -239604954 - MER5A DNA MER1_type -3 186 3 1068 144 11 29 chr2 11083450 11083624 -239604230 + FRAM SINE Alu 1 162 -14 2340 95 0 13 chr2 11083732 11084037 -239603817 - AluSq SINE Alu -12 301 1 661 99 0 0 chr2 11086043 11086134 -239601720 - AluSg/x SINE Alu -6 306 216 21 0 0 0 chr2 11086143 11086164 -239601690 + AT_rich Low_complexity Low_complexity 1 21 0 582 296 94 22 chr2 11088348 11088571 -239599283 + MIR SINE MIR 6 244 -18 199 273 195 47 chr2 11088601 11088729 -239599125 + MIR3 SINE MIR 13 159 -49 181 284 42 42 chr2 11089700 11089795 -239598059 - L3 LINE CR1 -5 1572 1478 1714 110 138 37 chr2 11089853 11090107 -239597747 + THE1B LTR MaLR 1 297 -67 2148 114 3 62 chr2 11090107 11090432 -239597422 - AluSx SINE Alu -6 306 1 1714 110 138 37 chr2 11090432 11090503 -239597351 + THE1B LTR MaLR 297 359 -5 2370 92 0 0 chr2 11091053 11091346 -239596508 - AluSx SINE Alu -19 293 1 276 262 12 24 chr2 11092470 11092554 -239595300 + MIR3 SINE MIR 110 192 -16 1269 267 125 71 chr2 11093493 11093639 -239594215 + L1MC4a LINE L1 3600 3737 -2409 285 29 0 0 chr2 11093639 11093673 -239594181 + (TG)n Simple_repeat Simple_repeat 2 35 0 1269 267 125 71 chr2 11093673 11094748 -239593106 + L1MC4a LINE L1 3737 4915 -1231 2417 70 6 16 chr2 11094748 11095061 -239592793 - AluY SINE Alu -1 310 1 1269 267 125 71 chr2 11095061 11095292 -239592562 + L1MC4a LINE L1 4915 5132 -1014 3382 54 0 5 chr2 11095532 11095961 -239591893 + L1PA8 LINE L1 5746 6172 0 228 272 20 82 chr2 11097028 11097175 -239590679 - L2 LINE L2 -225 3047 2910 859 336 34 26 chr2 11097571 11098065 -239589789 + L2 LINE L2 1733 2230 -1084 2354 105 3 0 chr2 11098115 11098421 -239589433 - AluSx SINE Alu -5 307 1 301 229 12 0 chr2 11098445 11098528 -239589326 + Charlie5 DNA MER1_type 2354 2437 -175 447 161 18 18 chr2 11098671 11098783 -239589071 + Charlie5 DNA MER1_type 2385 2496 -116 1103 275 91 63 chr2 11098783 11099852 -239588002 + L2 LINE L2 2209 3313 0 2501 80 0 0 chr2 11100047 11100349 -239587505 - AluSc SINE Alu -7 302 1 265 280 97 0 chr2 11101318 11101411 -239586443 - MER20 DNA MER1_type -80 139 38 187 238 191 48 chr2 11101873 11101957 -239585897 + L2 LINE L2 3180 3275 -38 447 275 48 53 chr2 11102041 11102230 -239585624 - MIR3 SINE MIR -7 201 14 2381 85 3 0 chr2 11102338 11102631 -239585223 + AluSq SINE Alu 1 294 -19 2156 119 10 0 chr2 11103167 11103462 -239584392 - AluSx SINE Alu -14 298 1 23 0 0 0 chr2 11104525 11104548 -239583306 + AT_rich Low_complexity Low_complexity 1 23 0 709 282 8 103 chr2 11104749 11105118 -239582736 + L1MC4a LINE L1 5497 5830 -1978 755 141 0 41 chr2 11105471 11105592 -239582262 - FLAM_A SINE Alu -14 128 13 260 358 83 0 chr2 11105651 11105771 -239582083 + L2 LINE L2 3143 3272 0 207 355 50 8 chr2 11106212 11106333 -239581521 + MIR SINE MIR 79 204 -58 5616 120 10 24 chr2 11110136 11111058 -239576796 - L1MA4 LINE L1 0 6300 5392 958 208 26 9 chr2 11111056 11111282 -239576572 + L1MA4 LINE L1 5136 5365 -781 * 1383 152 9 0 chr2 11111443 11111654 -239576200 + AluSg/x SINE Alu 83 295 -15 242 314 73 58 chr2 11112148 11112285 -239575569 + MIR3 SINE MIR 11 149 -59 323 151 163 35 chr2 11112400 11112486 -239575368 + MIR3 SINE MIR 109 205 -3 1500 118 47 40 chr2 11113803 11114125 -239573729 - THE1C LTR MaLR 0 375 52 2470 107 24 8 chr2 11114232 11114607 -239573247 - THE1C-int LTR MaLR -16 1564 1184 321 203 116 0 chr2 11114792 11114861 -239572993 - MIR SINE MIR -103 159 83 256 332 0 13 chr2 11115136 11115242 -239572612 - MIR SINE MIR -89 119 17 262 348 80 50 chr2 11116312 11116513 -239571341 - MIR SINE MIR -4 258 52 442 299 138 0 chr2 11117185 11117359 -239570495 + MIR SINE MIR 41 238 -24 288 330 54 43 chr2 11118162 11118347 -239569507 - L2 LINE L2 -10 3303 3117 635 337 209 16 chr2 11118448 11119275 -239568579 - L2 LINE L2 -351 2963 1977 1905 156 7 0 chr2 11119413 11119702 -239568152 + AluSx SINE Alu 3 293 -19 317 283 71 15 chr2 11120848 11121046 -239566808 + L1M4 LINE L1 4628 4836 -1310 448 265 83 17 chr2 11121171 11121352 -239566502 + MLT1L LTR MaLR 39 231 -384 226 283 170 0 chr2 11121465 11121571 -239566283 + MLT1L LTR MaLR 485 608 -7 301 322 96 29 chr2 11121719 11121927 -239565927 + L1M4 LINE L1 5040 5261 -885 325 269 113 38 chr2 11122029 11122189 -239565665 + L1MEd LINE L1 546 717 -5402 594 256 0 0 chr2 11122189 11122510 -239565344 + (CA)n Simple_repeat Simple_repeat 1 321 0 2323 82 13 0 chr2 11123808 11124111 -239563743 - AluY SINE Alu -4 307 1 644 132 25 0 chr2 11124181 11124302 -239563552 - L1MB4 LINE L1 0 6180 6057 383 308 107 0 chr2 11124590 11124759 -239563095 + MIR SINE MIR 24 210 -52 2366 96 3 0 chr2 11127018 11127320 -239560534 - AluSx SINE Alu -9 303 1 227 296 41 51 chr2 11128000 11128098 -239559756 + MIR3 SINE MIR 103 199 -9 368 186 14 0 chr2 11128860 11128930 -239558924 + L1ME3A LINE L1 5788 5858 -312 667 203 65 55 chr2 11128931 11129148 -239558706 + L1ME3A LINE L1 5942 6160 -10 216 97 0 0 chr2 11129630 11129661 -239558193 + (CTCA)n Simple_repeat Simple_repeat 1 31 0 525 277 110 7 chr2 11129939 11130158 -239557696 - MIR SINE MIR -10 252 16 2207 100 0 0 chr2 11130593 11130892 -239556962 + AluSx SINE Alu 1 299 -13 807 265 62 0 chr2 11133046 11133257 -239554597 - MER58A DNA MER1_type 0 224 1 319 173 34 45 chr2 11134765 11134944 -239552910 + (TA)n Simple_repeat Simple_repeat 1 177 0 1368 189 9 39 chr2 11135552 11135885 -239551969 + MER33 DNA MER1_type 1 323 -1 535 209 43 35 chr2 11136213 11136416 -239551438 - MER106A DNA MER1_type 0 236 3 3418 119 50 4 chr2 11138479 11138982 -239548872 + MER1A DNA MER1_type 2 527 0 3795 175 43 59 chr2 11141043 11141352 -239546502 + L1MB8 LINE L1 5036 5348 -830 204 40 0 0 chr2 11141352 11141377 -239546477 + (CA)n Simple_repeat Simple_repeat 2 26 0 3795 175 43 59 chr2 11141377 11141809 -239546045 + L1MB8 LINE L1 5348 5742 -436 2431 68 0 0 chr2 11141809 11142119 -239545735 - AluY SINE Alu -1 310 1 3795 175 43 59 chr2 11142119 11142548 -239545306 + L1MB8 LINE L1 5742 6176 -2 420 110 0 132 chr2 11143244 11143335 -239544519 - MADE1 DNA Mariner -1 79 1 335 326 65 0 chr2 11143337 11143475 -239544379 - MIR3 SINE MIR -29 179 33 1162 243 127 57 chr2 11143655 11143739 -239544115 + MLT1G1 LTR MaLR 1 78 -515 3118 182 102 5 chr2 11143739 11143976 -239543878 + MER72 LTR ERV1 5 217 -505 278 0 54 0 chr2 11143976 11144013 -239543841 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3118 182 102 5 chr2 11144013 11144429 -239543425 + MER72 LTR ERV1 217 722 0 1162 243 127 57 chr2 11144429 11144882 -239542972 + MLT1G1 LTR MaLR 78 588 -5 204 250 100 25 chr2 11146231 11146327 -239541527 - L2 LINE L2 -56 3257 3149 1529 170 22 7 chr2 11146327 11146598 -239541256 + AluJb SINE Alu 1 275 -37 204 250 100 25 chr2 11146598 11146621 -239541233 - L2 LINE L2 -164 3149 3129 234 0 0 0 chr2 11146669 11146695 -239541159 + (TA)n Simple_repeat Simple_repeat 1 26 0 299 164 77 87 chr2 11197129 11197233 -239490621 + MIR SINE MIR 124 226 -36 225 317 43 61 chr2 11197305 11197535 -239490319 + MIR SINE MIR 27 252 -10 1304 174 9 0 chr2 11197648 11197861 -239489993 - AluJb SINE Alu -12 300 86 1397 159 145 64 chr2 11198006 11198365 -239489489 - MLT1B LTR MaLR 0 390 3 784 174 39 13 chr2 11198433 11198588 -239489266 + MLT1B LTR MaLR 232 390 0 2000 149 0 7 chr2 11201528 11201829 -239486025 - AluSg SINE Alu -11 299 1 309 233 44 0 chr2 11201931 11202021 -239485833 + LTR50 LTR ERVL 702 795 0 604 275 17 26 chr2 11202038 11202271 -239485583 - L1M4 LINE L1 -3705 2441 2211 24 0 0 0 chr2 11203216 11203240 -239484614 + AT_rich Low_complexity Low_complexity 1 24 0 423 261 156 0 chr2 11203600 11203762 -239484092 + MIR SINE MIR 7 192 -70 3247 141 125 29 chr2 11203944 11204598 -239483256 + LTR62 LTR ERVK 1 717 -2 634 274 34 26 chr2 11206320 11206554 -239481300 + MIR SINE MIR 21 256 -6 257 342 46 7 chr2 11207280 11207432 -239480422 - MIR SINE MIR -6 256 99 283 204 177 53 chr2 11207727 11207953 -239479901 + L2 LINE L2 2383 2636 -678 1614 218 32 41 chr2 11207968 11208409 -239479445 + MER101 LTR ERV1 11 447 -27 934 252 147 42 chr2 11208506 11208934 -239478920 - L2 LINE L2 0 3313 2841 290 274 105 48 chr2 11209009 11209133 -239478721 - MIR SINE MIR -51 211 81 408 274 22 7 chr2 11209441 11209576 -239478278 - MIR3 SINE MIR -26 182 46 979 220 56 60 chr2 11209755 11210197 -239477657 + MLT1D LTR MaLR 3 498 -7 390 255 183 0 chr2 11211361 11211509 -239476345 + MIR SINE MIR 75 248 -14 208 214 0 0 chr2 11211573 11211615 -239476239 - MIR SINE MIR -103 159 118 1727 182 63 17 chr2 11212154 11212501 -239475353 + MLT1B LTR MaLR 28 390 0 387 283 40 7 chr2 11212536 11212688 -239475166 + MIR SINE MIR 106 262 0 2377 107 0 7 chr2 11213437 11213746 -239474108 - AluSx SINE Alu -5 307 1 218 95 24 0 chr2 11214910 11214952 -239472902 + (TG)n Simple_repeat Simple_repeat 2 44 0 2193 165 22 3 chr2 11214957 11215315 -239472539 - MLT1A1 LTR MaLR 0 365 1 847 112 12 18 chr2 11215378 11215547 -239472307 + (TAGA)n Simple_repeat Simple_repeat 4 171 0 228 275 11 44 chr2 11216369 11216460 -239471394 - MER103 DNA DNA -59 107 20 309 239 92 18 chr2 11216639 11216748 -239471106 + MIR SINE MIR 74 190 -72 2271 208 50 13 chr2 11217913 11218451 -239469403 + MER74A LTR ERVL 1 558 0 221 309 73 41 chr2 11219061 11219281 -239468573 + L2 LINE L2 1325 1551 -1763 1836 164 7 10 chr2 11219429 11219727 -239468127 + AluSx SINE Alu 1 297 -15 231 243 63 27 chr2 11220553 11220664 -239467190 + L1ME LINE L1 5746 5860 -261 1404 187 159 6 chr2 11220673 11220988 -239466866 + MLT1A1 LTR MaLR 3 365 0 182 211 53 0 chr2 11221207 11221245 -239466609 - L2 LINE L2 -23 3249 3210 188 167 296 0 chr2 11221411 11221465 -239466389 - L2 LINE L2 -3 3310 3241 2072 115 81 16 chr2 11221511 11221832 -239466022 + MER61A LTR ERV1 2 343 0 535 198 86 19 chr2 11222139 11222301 -239465553 - MIR SINE MIR -50 212 40 2172 98 7 0 chr2 11222301 11222578 -239465276 + AluSq SINE Alu 24 302 -11 184 333 0 49 chr2 11222653 11222734 -239465120 - MIR SINE MIR -147 115 39 222 247 86 0 chr2 11222823 11222904 -239464950 - MIR SINE MIR -13 249 162 1359 123 4 25 chr2 11223667 11223902 -239463952 - AluY SINE Alu -81 230 1 451 258 58 21 chr2 11223998 11224188 -239463666 + L2 LINE L2 3081 3277 -36 488 250 277 57 chr2 11224424 11224760 -239463094 + MLT1H LTR MaLR 123 532 -17 222 300 40 20 chr2 11224862 11224962 -239462892 - MIR SINE MIR -5 257 156 573 227 60 100 chr2 11225012 11225263 -239462591 + MIR SINE MIR 13 253 -9 337 271 98 8 chr2 11225300 11225433 -239462421 - MIR SINE MIR -48 214 70 2027 126 10 3 chr2 11225439 11225732 -239462122 + AluSx SINE Alu 1 295 -17 746 158 0 8 chr2 11225615 11225735 -239462119 + AluSg/x SINE Alu 180 298 -14 323 333 98 0 chr2 11226514 11226646 -239461208 + L2 LINE L2 3122 3266 -6 583 235 15 0 chr2 11228436 11228568 -239459286 - ERVL LTR ERVL -3592 2172 2039 399 211 22 0 chr2 11228570 11228660 -239459194 - ERVL LTR ERVL -3640 2124 2033 * 4993 241 25 5 chr2 11228659 11229764 -239458090 - ERVL LTR ERVL -3642 2122 996 1194 212 126 62 chr2 11230081 11230453 -239457401 - MSTD LTR MaLR 0 396 1 1917 204 15 33 chr2 11230572 11230969 -239456885 - MLT1B LTR MaLR 0 390 1 301 344 70 16 chr2 11231475 11231661 -239456193 - MIR SINE MIR -47 215 20 1738 164 21 11 chr2 11232183 11232469 -239455385 - AluJo SINE Alu -23 289 1 355 239 142 81 chr2 11233014 11233211 -239454643 + MER3 DNA MER1_type 1 209 0 * 571 242 99 37 chr2 11233062 11233223 -239454631 - MER3 DNA MER1_type -3 206 36 365 347 34 82 chr2 11233860 11234154 -239453700 - L2 LINE L2 -1 3271 2992 560 256 28 40 chr2 11234363 11234539 -239453315 - MER77 LTR ERV1 -35 570 397 216 225 0 0 chr2 11234549 11234589 -239453265 + T-rich Low_complexity Low_complexity 1 40 0 2276 105 3 13 chr2 11234592 11234907 -239452947 - AluSx SINE Alu 0 312 1 1122 231 19 115 chr2 11234915 11235334 -239452520 - MER77 LTR ERV1 -217 388 10 295 154 154 39 chr2 11235355 11235433 -239452421 - L1M4 LINE L1 -1498 4648 4562 877 132 69 6 chr2 11235464 11235623 -239452231 - AluSx SINE Alu -20 289 121 921 145 0 0 chr2 11235738 11235869 -239451985 - AluSx SINE Alu -181 131 1 2221 114 7 0 chr2 11235943 11236232 -239451622 - AluSx SINE Alu -21 291 1 250 258 56 11 chr2 11236383 11236472 -239451382 - L1M4 LINE L1 -1828 4318 4226 1760 215 134 5 chr2 11236477 11236918 -239450936 - MLT1D LTR MaLR -2 503 6 413 283 85 46 chr2 11236920 11237227 -239450627 - L1M4 LINE L1 -1916 4230 3912 226 234 99 18 chr2 11237335 11237446 -239450408 - MLT1H1 LTR MaLR -124 431 312 323 262 37 80 chr2 11239098 11239224 -239448630 + MER5A DNA MER1_type 4 121 -68 2009 141 7 3 chr2 11239224 11239522 -239448332 - AluJb SINE Alu -13 299 1 323 262 37 80 chr2 11239522 11239582 -239448272 + MER5A DNA MER1_type 121 182 -7 2238 145 90 0 chr2 11240154 11240533 -239447321 - MLT2C2 LTR ERVL -51 413 1 2677 39 0 3 chr2 11240631 11240941 -239446913 + AluY SINE Alu 1 309 -2 463 200 85 54 chr2 11241804 11241934 -239445920 - MIR SINE MIR -50 212 79 1759 168 3 29 chr2 11242131 11242441 -239445413 + AluJb SINE Alu 1 302 -10 531 248 12 56 chr2 11242903 11243064 -239444790 - MER63A DNA MER1_type 0 210 57 3265 67 11 61 chr2 11243216 11243500 -239444354 - L1PB1 LINE L1 -4 6147 5893 2179 89 0 24 chr2 11243500 11243793 -239444061 + AluSx SINE Alu 1 286 -26 3265 67 11 61 chr2 11243793 11243969 -239443885 - L1PB1 LINE L1 -258 5893 5710 2278 93 0 10 chr2 11244056 11244356 -239443498 + AluY SINE Alu 1 297 -14 226 363 116 14 chr2 11244546 11244692 -239443162 + L2 LINE L2 3107 3267 -5 434 264 10 1 chr2 11245271 11245381 -239442473 + MIR SINE MIR 35 143 -67 315 336 66 8 chr2 11246083 11246205 -239441649 - MIR SINE MIR -113 149 21 209 338 0 26 chr2 11246218 11246295 -239441559 + MIR SINE MIR 108 182 -80 301 257 230 9 chr2 11246743 11246856 -239440998 + MIR SINE MIR 69 206 -56 283 247 0 24 chr2 11248276 11248361 -239439493 + L2 LINE L2 2983 3065 -207 283 316 140 0 chr2 11248655 11248769 -239439085 + L2 LINE L2 3138 3267 -5 583 261 46 7 chr2 11248814 11248967 -239438887 + MIR SINE MIR 31 189 -73 405 307 189 17 chr2 11249606 11249844 -239438010 - L3 LINE CR1 -139 1438 1160 293 297 26 87 chr2 11250393 11250622 -239437232 - L3 LINE CR1 -567 1010 796 400 233 157 19 chr2 11251307 11251466 -239436388 - MIR SINE MIR -1 261 81 405 302 39 44 chr2 11251523 11251705 -239436149 - MIR3 SINE MIR -9 199 19 2005 189 17 3 chr2 11252057 11252407 -239435447 - THE1A LTR MaLR 0 355 1 195 273 18 0 chr2 11252797 11252852 -239435002 - MIR SINE MIR -56 206 151 2276 69 0 21 chr2 11253330 11253651 -239434203 + AluY SINE Alu 1 315 0 2202 163 26 16 chr2 11254506 11254892 -239432962 - MLT1B LTR MaLR 0 390 1 3799 210 28 67 chr2 11254893 11256199 -239431655 - MLT1B-int LTR MaLR -1 1370 2 265 88 0 0 chr2 11256200 11256234 -239431620 - MLT2D LTR ERVL 0 520 487 * 417 143 0 0 chr2 11256231 11256294 -239431560 + Tigger2 DNA MER2_type 7 69 -2649 267 105 0 0 chr2 11256292 11256330 -239431524 + Tigger2 DNA MER2_type 2280 2317 -401 * 1026 206 31 5 chr2 11256349 11256543 -239431311 - MLT2D LTR ERVL -94 320 122 2681 140 7 74 chr2 11257735 11257807 -239430047 - MSTB LTR MaLR 0 426 351 2349 75 3 35 chr2 11257807 11258126 -239429728 + AluY SINE Alu 1 309 -2 2681 140 7 74 chr2 11258126 11258510 -239429344 - MSTB LTR MaLR -75 351 1 228 208 125 28 chr2 11258787 11258859 -239428995 + L2 LINE L2 2992 3070 -202 243 0 0 0 chr2 11259315 11259342 -239428512 + (A)n Simple_repeat Simple_repeat 1 27 0 349 268 31 0 chr2 11259521 11259618 -239428236 - MIR SINE MIR -155 107 8 * 371 340 70 51 chr2 11259585 11260000 -239427854 + L2 LINE L2 2247 2669 -645 553 157 0 0 chr2 11260092 11260175 -239427679 + AluSg/x SINE Alu 217 299 -11 2453 88 0 0 chr2 11260179 11260486 -239427368 + AluY SINE Alu 1 307 -4 343 315 195 25 chr2 11260530 11260730 -239427124 + MIR SINE MIR 20 253 -9 2202 120 0 0 chr2 11261060 11261359 -239426495 + AluSx SINE Alu 1 299 -13 3160 144 44 4 chr2 11261396 11261874 -239425980 - LOR1a LTR ERV1 0 497 1 569 301 47 10 chr2 11262150 11262343 -239425511 - MIR SINE MIR 0 262 63 285 165 21 134 chr2 11262415 11262512 -239425342 + MER112 DNA MER1_type 2 87 -173 1936 168 0 0 chr2 11262515 11262812 -239425042 - AluJb SINE Alu -15 297 1 404 254 62 72 chr2 11264384 11264430 -239423424 - MIR SINE MIR -69 193 148 2443 130 24 11 chr2 11264430 11264799 -239423055 - THE1C LTR MaLR -1 374 1 404 254 62 72 chr2 11264799 11264945 -239422909 - MIR SINE MIR -114 148 3 2347 122 30 73 chr2 11264959 11265320 -239422534 - L1MA5A LINE L1 -5 6292 5954 2026 150 0 0 chr2 11265320 11265633 -239422221 - AluSq SINE Alu 0 313 1 2347 122 30 73 chr2 11265633 11265738 -239422116 - L1MA5A LINE L1 -343 5954 5846 2880 226 91 8 chr2 11266017 11267230 -239420624 + L1ME2 LINE L1 4666 5998 -166 2326 157 76 40 chr2 11267230 11267675 -239420179 + LOR1b LTR ERV1 1 461 0 2880 226 91 8 chr2 11267675 11267844 -239420010 + L1ME2 LINE L1 5998 6151 -13 1387 255 103 18 chr2 11267857 11268594 -239419260 + L1ME3A LINE L1 5152 5949 -221 2131 100 40 3 chr2 11268814 11269114 -239418740 - AluSx SINE Alu -1 311 1 385 220 44 13 chr2 11269754 11269913 -239417941 + (TA)n Simple_repeat Simple_repeat 1 164 0 207 176 78 39 chr2 11271034 11271046 -239416808 + MIR SINE MIR 85 95 -113 2633 88 30 11 chr2 11271046 11271410 -239416444 - THE1C LTR MaLR -4 371 1 207 176 78 39 chr2 11271410 11271448 -239416406 + MIR SINE MIR 95 137 -71 279 258 194 0 chr2 11271454 11271547 -239416307 - L2 LINE L2 -5 3308 3198 2717 142 60 39 chr2 11271547 11272033 -239415821 - LOR1a LTR ERV1 0 497 2 190 228 132 70 chr2 11272166 11272280 -239415574 + MIR SINE MIR 142 262 0 445 252 0 32 chr2 11272414 11272537 -239415317 - MER5A DNA MER1_type -39 150 32 22 56 0 0 chr2 11274051 11274087 -239413767 + AT_rich Low_complexity Low_complexity 1 36 0 333 255 185 32 chr2 11274143 11274300 -239413554 - MIR SINE MIR -62 200 20 198 309 217 0 chr2 11274619 11274849 -239413005 - L2 LINE L2 -533 2781 2502 352 319 77 11 chr2 11275784 11275966 -239411888 + MIR SINE MIR 19 212 -50 222 310 69 0 chr2 11276121 11276179 -239411675 - L2 LINE L2 -1 3271 3210 6904 147 43 6 chr2 11276754 11278624 -239409230 + L1PA11 LINE L1 4263 6174 0 2344 141 14 3 chr2 11278624 11278971 -239408883 + L1PA15 LINE L1 5797 6147 -18 264 88 0 0 chr2 11279023 11279057 -239408797 - U2 snRNA snRNA -154 34 1 477 237 15 38 chr2 11279367 11279498 -239408356 - L1M2c LINE L1 -4652 2137 2010 580 204 81 65 chr2 11281465 11281651 -239406203 - MER53 DNA DNA 0 189 1 237 328 60 0 chr2 11282696 11282812 -239405042 - MIR SINE MIR -139 123 1 2185 119 3 0 chr2 11283036 11283338 -239404516 + AluSx SINE Alu 1 303 -9 819 242 119 40 chr2 11283417 11283578 -239404276 - MLT1J2 LTR MaLR -115 335 188 1154 296 50 39 chr2 11283578 11284020 -239403834 + LTR16A LTR ERVL 1 447 -3 819 242 119 40 chr2 11284020 11284135 -239403719 - MLT1J2 LTR MaLR -262 188 37 582 296 23 68 chr2 11285167 11285228 -239402626 + MIR SINE MIR 10 72 -190 2074 106 7 0 chr2 11285228 11285511 -239402343 + AluSg SINE Alu 1 285 -25 216 0 0 0 chr2 11285511 11285535 -239402319 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 582 296 23 68 chr2 11285535 11285736 -239402118 + MIR SINE MIR 70 261 -1 204 247 164 0 chr2 11286325 11286398 -239401456 + MIR SINE MIR 105 189 -73 21 0 0 0 chr2 11286937 11286958 -239400896 + AT_rich Low_complexity Low_complexity 1 21 0 200 265 66 78 chr2 11287054 11287220 -239400634 - L3 LINE CR1 -75 1502 1339 241 260 104 10 chr2 11288103 11288199 -239399655 + MIR SINE MIR 61 165 -97 458 279 75 7 chr2 11288710 11288857 -239398997 + MIR SINE MIR 30 186 -76 1136 252 43 41 chr2 11289026 11289371 -239398483 - L1ME3A LINE L1 -5 6165 5820 461 258 37 14 chr2 11289820 11289969 -239397885 + MIR SINE MIR 56 200 -36 8323 215 37 20 chr2 11290015 11291448 -239396406 + L1MA4A LINE L1 85 1492 -5356 2108 129 3 3 chr2 11291448 11291758 -239396096 + AluSg SINE Alu 1 310 0 8323 215 37 20 chr2 11291758 11294916 -239392938 + L1MA4A LINE L1 1492 5570 -1278 1591 124 6 95 chr2 11294919 11295276 -239392578 - MER4A LTR ERV1 0 664 261 627 134 0 10 chr2 11295276 11295373 -239392481 - MER4A LTR ERV1 -566 98 3 2749 130 26 70 chr2 11295374 11296280 -239391574 + L1MA4A LINE L1 5569 6434 -571 1856 120 38 17 chr2 11296280 11296567 -239391287 + L1MA4A LINE L1 6698 6994 -11 189 313 157 17 chr2 11296921 11297036 -239390818 - MIR3 SINE MIR -68 140 10 216 167 0 0 chr2 11297070 11297106 -239390748 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 415 277 202 16 chr2 11297119 11297372 -239390482 - L2 LINE L2 -12 3301 3002 269 320 59 30 chr2 11298037 11298178 -239389676 + MIR SINE MIR 16 161 -64 2313 105 0 0 chr2 11298301 11298595 -239389259 + AluSx SINE Alu 1 294 -18 204 40 0 0 chr2 11298636 11298661 -239389193 + (TGG)n Simple_repeat Simple_repeat 1 25 0 337 73 0 0 chr2 11299033 11299074 -239388780 + Alu SINE Alu 13 53 -247 896 104 149 0 chr2 11299075 11299209 -239388645 + AluSg/x SINE Alu 144 297 -13 2758 255 75 14 chr2 11299421 11299694 -239388160 + L1M4 LINE L1 3480 3735 -2411 2015 125 3 20 chr2 11299694 11299990 -239387864 + AluSx SINE Alu 1 291 -21 2758 255 75 14 chr2 11299990 11300623 -239387231 + L1M4 LINE L1 3735 4441 -1705 384 224 47 0 chr2 11300654 11300739 -239387115 - MER58C DNA MER1_type -1 214 126 183 80 0 0 chr2 11300740 11300765 -239387089 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 284 309 37 0 chr2 11300773 11300854 -239387000 - MER58C DNA MER1_type -131 84 1 2688 236 32 6 chr2 11300857 11301572 -239386282 + L1M4 LINE L1 4439 5172 -974 943 221 5 5 chr2 11302053 11302257 -239385597 + L1ME3A LINE L1 4666 4869 -1277 200 304 18 0 chr2 11302326 11302382 -239385472 + L2 LINE L2 3200 3256 -16 2552 48 3 0 chr2 11302391 11302685 -239385169 + AluY SINE Alu 1 295 -16 366 23 0 0 chr2 11302696 11302739 -239385115 + (TGGA)n Simple_repeat Simple_repeat 2 44 0 226 310 216 0 chr2 11303240 11303356 -239384498 - MIR SINE MIR -73 189 49 313 301 54 62 chr2 11304251 11304397 -239383457 + MIR SINE MIR 47 198 -64 1330 137 124 29 chr2 11305150 11305487 -239382367 - MSTA LTR MaLR 0 375 1 369 286 40 16 chr2 11305527 11305653 -239382201 - MIR SINE MIR -114 148 20 2422 181 56 11 chr2 11305677 11306142 -239381712 - MER66B LTR ERV1 0 486 1 2077 138 16 0 chr2 11306608 11306913 -239380941 + AluSx SINE Alu 1 310 -2 184 258 52 122 chr2 11308553 11308766 -239379088 + L2 LINE L2 2831 3028 -244 548 219 34 41 chr2 11308902 11309096 -239378758 + MIR SINE MIR 14 205 -57 882 298 103 21 chr2 11309145 11309556 -239378298 + L1ME3A LINE L1 5119 5495 -675 1120 183 0 0 chr2 11309556 11309731 -239378123 - FAM SINE Alu 0 175 1 882 298 103 21 chr2 11309731 11310036 -239377818 + L1ME3A LINE L1 5495 5894 -276 236 283 38 4 chr2 11310524 11310626 -239377228 + MIR SINE MIR 82 188 -20 2006 128 0 27 chr2 11312160 11312457 -239375397 - AluSx SINE Alu -19 293 5 1292 194 86 119 chr2 11312633 11313061 -239374793 - MLT2D LTR ERVL 0 414 1 355 349 78 5 chr2 11313727 11313919 -239373935 + MIR SINE MIR 21 226 -36 184 325 32 51 chr2 11314744 11314901 -239372953 + L2 LINE L2 2154 2307 -1007 195 233 47 0 chr2 11315089 11315132 -239372722 + MIR SINE MIR 30 74 -134 197 317 33 17 chr2 11315219 11315287 -239372567 - MIR SINE MIR -22 240 168 3159 119 9 0 chr2 11315287 11315714 -239372140 + MER57B LTR ERV1 1 431 -3 197 317 33 17 chr2 11315714 11315765 -239372089 - MIR SINE MIR -94 168 119 185 256 64 39 chr2 11315777 11315855 -239371999 + MIR SINE MIR 158 237 -25 729 307 21 17 chr2 11317281 11317464 -239370390 + MIR SINE MIR 2 188 -74 3588 133 0 2 chr2 11317464 11317962 -239369892 + LOR1a LTR ERV1 1 497 0 729 307 21 17 chr2 11317962 11318016 -239369838 + MIR SINE MIR 188 240 -22 2109 106 32 16 chr2 11319737 11320048 -239367806 + THE1C LTR MaLR 1 316 -59 499 73 59 0 chr2 11323178 11323246 -239364608 + THE1C LTR MaLR 304 375 0 187 250 217 0 chr2 11323460 11323520 -239364334 - MIR3 SINE MIR -22 186 114 21 57 0 0 chr2 11323638 11323673 -239364181 + AT_rich Low_complexity Low_complexity 1 35 0 224 326 0 22 chr2 11323799 11323891 -239363963 - MIR SINE MIR -122 140 51 4111 184 28 73 chr2 11324245 11325190 -239362664 - L1MB7 LINE L1 -6 6178 5191 507 33 0 0 chr2 11325190 11325251 -239362603 + (CA)n Simple_repeat Simple_repeat 2 62 0 4111 184 28 73 chr2 11325251 11325594 -239362260 - L1MB7 LINE L1 -993 5191 4967 2004 117 46 0 chr2 11325594 11325877 -239361977 - AluY SINE Alu -15 296 1 4111 184 28 73 chr2 11325877 11326004 -239361850 - L1MB7 LINE L1 -1217 4967 4836 299 324 63 42 chr2 11326390 11326674 -239361180 + L1MC/D LINE L1 5353 5642 -2166 22 35 0 0 chr2 11326946 11326975 -239360879 + AT_rich Low_complexity Low_complexity 1 29 0 2575 71 0 0 chr2 11327252 11327560 -239360294 + AluY SINE Alu 1 308 -3 3980 169 18 35 chr2 11327794 11328573 -239359281 - L1MB3 LINE L1 -1 6182 5417 1717 255 22 13 chr2 11330124 11330587 -239357267 + MLT1C LTR MaLR 1 467 0 414 294 8 0 chr2 11333052 11333171 -239354683 - MIR SINE MIR -108 154 35 192 242 65 0 chr2 11334454 11334516 -239353338 + MIR SINE MIR 108 173 -89 226 188 0 21 chr2 11334817 11334865 -239352989 + (TA)n Simple_repeat Simple_repeat 1 47 0 199 269 19 67 chr2 11334877 11334937 -239352917 + MIR SINE MIR 164 218 -44 1834 192 14 11 chr2 11334937 11335301 -239352553 - MLT1A1 LTR MaLR 0 365 1 199 269 19 67 chr2 11335301 11335344 -239352510 + MIR SINE MIR 218 262 0 1172 44 0 7 chr2 11336205 11336342 -239351512 - AluY SINE Alu -175 136 1 2141 204 54 78 chr2 11336352 11336478 -239351376 - L1ME1 LINE L1 -5 6161 6034 885 117 0 0 chr2 11336478 11336606 -239351248 + L1PA10 LINE L1 6031 6158 -10 2141 204 54 78 chr2 11336606 11337110 -239350744 - L1ME1 LINE L1 -132 6034 5546 3442 176 47 43 chr2 11337119 11337864 -239349990 - L1MD1 LINE L1 0 6242 5495 189 0 0 0 chr2 11339269 11339290 -239348564 + (A)n Simple_repeat Simple_repeat 1 21 0 515 295 57 5 chr2 11339770 11339980 -239347874 - MIR SINE MIR -3 259 39 297 306 49 22 chr2 11340602 11340785 -239347069 + L2 LINE L2 2311 2498 -816 1017 249 9 0 chr2 11341053 11341282 -239346572 - MIR SINE MIR -10 252 22 319 185 126 89 chr2 11341361 11341496 -239346358 - MIR SINE MIR -83 179 40 271 336 25 16 chr2 11341602 11341724 -239346130 - MIR3 SINE MIR -3 205 83 203 0 37 0 chr2 11341871 11341898 -239345956 + (TC)n Simple_repeat Simple_repeat 1 28 0 1897 253 55 28 chr2 11343153 11343918 -239343936 - L1ME3 LINE L1 -42 6120 5292 265 250 14 0 chr2 11343916 11343988 -239343866 + L1M LINE L1 5323 5395 -769 * 739 311 86 17 chr2 11344639 11344990 -239342864 + MLT1I LTR MaLR 1 375 -34 292 274 163 26 chr2 11346150 11346303 -239341551 - Charlie8 DNA MER1_type -2201 216 43 650 284 135 48 chr2 11346638 11347125 -239340729 + L2 LINE L2 2216 2659 -654 192 111 0 0 chr2 11347125 11347161 -239340693 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 650 284 135 48 chr2 11347161 11347671 -239340183 + L2 LINE L2 2659 3297 -16 2320 145 31 3 chr2 11347671 11348063 -239339791 - MER57A LTR ERV1 0 403 1 650 284 135 48 chr2 11348063 11348081 -239339773 + L2 LINE L2 3297 3312 -1 1752 220 128 15 chr2 11348188 11348642 -239339212 + MLT1D LTR MaLR 1 505 0 2027 56 16 0 chr2 11348803 11349055 -239338799 + AluY SINE Alu 50 305 -6 188 325 0 38 chr2 11349257 11349337 -239338517 - MIR SINE MIR -138 124 48 246 284 55 31 chr2 11350176 11350303 -239337551 + L2 LINE L2 3141 3270 -2 21 71 0 0 chr2 11350495 11350537 -239337317 + AT_rich Low_complexity Low_complexity 1 42 0 345 290 80 23 chr2 11350572 11350748 -239337106 - MIR SINE MIR -57 205 20 219 283 0 0 chr2 11350756 11350816 -239337038 + CT-rich Low_complexity Low_complexity 2 61 0 392 254 90 25 chr2 11352036 11352158 -239335696 - LTR16C LTR ERVL -10 481 352 546 203 32 8 chr2 11352165 11352288 -239335566 + MER45B DNA AcHobo 3 128 -912 1479 201 60 6 chr2 11352291 11352605 -239335249 + MER45B DNA AcHobo 710 1040 0 583 266 35 18 chr2 11352608 11352777 -239335077 - LTR16C LTR ERVL -141 350 179 951 276 108 26 chr2 11353129 11353517 -239334337 - MLT1E2 LTR MaLR -2 624 205 2502 187 71 2 chr2 11353557 11354049 -239333805 - L1MB5 LINE L1 -8 6166 5641 526 219 270 0 chr2 11354054 11354191 -239333663 - MLT1E2 LTR MaLR -442 184 11 379 253 12 0 chr2 11354647 11354730 -239333124 + L2 LINE L2 3186 3269 -3 290 233 44 33 chr2 11356583 11356673 -239331181 + L2 LINE L2 2655 2745 -569 632 207 67 28 chr2 11356773 11356952 -239330902 + MER53 DNA DNA 2 187 -2 406 355 72 41 chr2 11356956 11357345 -239330509 + L2 LINE L2 2871 3271 -1 305 342 63 0 chr2 11358851 11359009 -239328845 - MIR SINE MIR -22 240 73 280 335 30 35 chr2 11359211 11359408 -239328446 + MIR SINE MIR 28 223 -39 1367 167 77 126 chr2 11361029 11361520 -239326334 + MLT1C LTR MaLR 1 467 0 247 306 71 0 chr2 11362236 11362321 -239325533 + L2 LINE L2 3172 3262 -10 451 257 66 0 chr2 11362784 11362936 -239324918 + MIR SINE MIR 87 248 -14 263 224 17 0 chr2 11362958 11363016 -239324838 - MIR SINE MIR -113 95 37 2718 88 14 11 chr2 11363163 11363526 -239324328 + THE1B LTR MaLR 1 364 0 326 301 73 1 chr2 11363526 11363660 -239324194 - MIR SINE MIR -62 146 31 288 221 0 67 chr2 11364003 11364107 -239323747 - L2 LINE L2 -61 3252 3156 2233 116 0 0 chr2 11364468 11364760 -239323094 - AluSc SINE Alu -16 293 2 356 298 43 14 chr2 11364998 11365140 -239322714 - MIR3 SINE MIR -65 143 15 479 282 160 0 chr2 11365612 11365793 -239322061 - MIR SINE MIR -6 256 47 2060 135 3 0 chr2 11366025 11366314 -239321540 - AluSx SINE Alu -21 291 2 2080 122 3 20 chr2 11367229 11367533 -239320321 - AluSx SINE Alu -13 299 1 1120 183 77 37 chr2 11368190 11368620 -239319234 - MLT1B LTR MaLR -16 451 1 522 263 0 0 chr2 11368620 11368730 -239319124 - MER69A DNA AcHobo -67 110 1 186 43 0 0 chr2 11368952 11368975 -239318879 + (CCA)n Simple_repeat Simple_repeat 1 23 0 196 292 14 0 chr2 11369183 11369255 -239318599 - MIR SINE MIR -70 138 66 193 308 92 17 chr2 11370338 11370458 -239317396 + MIR SINE MIR 127 255 -7 384 295 69 17 chr2 11370766 11370939 -239316915 + MIR SINE MIR 56 237 -25 209 182 0 0 chr2 11370956 11370989 -239316865 + (ATG)n Simple_repeat Simple_repeat 2 34 0 711 230 59 11 chr2 11371095 11371282 -239316572 + AluJo SINE Alu 116 311 -1 188 373 7 14 chr2 11371980 11372122 -239315732 - MIR SINE MIR -71 191 51 216 270 302 25 chr2 11372411 11372570 -239315284 + MIR SINE MIR 12 214 -48 281 306 0 0 chr2 11373276 11373348 -239314506 - L2 LINE L2 0 3272 3201 253 146 0 0 chr2 11373382 11373423 -239314431 - L2 LINE L2 -19 3294 3254 289 119 0 0 chr2 11373640 11373682 -239314172 - 5S rRNA rRNA -79 42 1 28 0 0 0 chr2 11374041 11374069 -239313785 + AT_rich Low_complexity Low_complexity 1 28 0 192 158 232 49 chr2 11374393 11374475 -239313379 + L2 LINE L2 3169 3265 -7 2297 97 0 7 chr2 11374831 11375129 -239312725 - AluY SINE Alu -13 298 3 209 372 41 28 chr2 11375136 11375281 -239312573 + L2 LINE L2 3119 3265 -7 1964 180 18 13 chr2 11375576 11375960 -239311894 + MLT2D LTR ERVL 1 482 -38 387 144 48 20 chr2 11375960 11376106 -239311748 + (TCTA)n Simple_repeat Simple_repeat 4 153 0 258 56 0 0 chr2 11376106 11376142 -239311712 + (TC)n Simple_repeat Simple_repeat 1 36 0 434 312 81 60 chr2 11376386 11376819 -239311035 + LTR16A1 LTR ERVL 16 457 0 186 273 23 0 chr2 11376828 11376872 -239310982 + L2 LINE L2 3216 3260 -12 2379 87 3 0 chr2 11376940 11377238 -239310616 - AluSc SINE Alu -10 299 1 2068 122 3 20 chr2 11377673 11377977 -239309877 + AluSx SINE Alu 1 299 -13 2039 135 3 0 chr2 11378892 11379181 -239308673 + AluSx SINE Alu 2 291 -21 532 291 137 4 chr2 11379377 11379594 -239308260 + MIR SINE MIR 15 256 -6 394 298 43 14 chr2 11380066 11380208 -239307646 + MIR3 SINE MIR 15 162 -65 2217 116 0 0 chr2 11380446 11380738 -239307116 + AluSc SINE Alu 2 293 -16 318 221 0 67 chr2 11381099 11381203 -239306651 + L2 LINE L2 3156 3252 -61 361 301 73 1 chr2 11381546 11381680 -239306174 + MIR SINE MIR 31 172 -62 2862 88 14 11 chr2 11381680 11382043 -239305811 - THE1B LTR MaLR 0 364 1 285 224 17 0 chr2 11382190 11382248 -239305606 + MIR SINE MIR 37 95 -113 513 286 134 0 chr2 11382270 11382487 -239305367 - MIR SINE MIR -14 248 3 183 268 0 36 chr2 11382495 11382551 -239305303 + MIR3 SINE MIR 105 158 -50 259 305 86 9 chr2 11382879 11382984 -239304870 - L2 LINE L2 -4 3268 3156 1500 159 77 126 chr2 11383687 11384178 -239303676 - MLT1C LTR MaLR 0 467 1 202 311 11 98 chr2 11384674 11384857 -239302997 - MIR SINE MIR -74 188 22 327 275 17 97 chr2 11385800 11386031 -239301823 - MIR SINE MIR -39 223 19 352 330 81 32 chr2 11386136 11386357 -239301497 + MIR SINE MIR 9 240 -22 520 349 121 35 chr2 11387863 11388256 -239299598 - L2 LINE L2 -1 3271 2913 654 196 73 34 chr2 11388256 11388435 -239299419 - MER53 DNA DNA -2 187 2 520 349 121 35 chr2 11388435 11388768 -239299086 - L2 LINE L2 -359 2913 2485 408 253 12 0 chr2 11390477 11390560 -239297294 - L2 LINE L2 -3 3269 3186 529 219 270 0 chr2 11391016 11391153 -239296701 + MLT1E2 LTR MaLR 11 184 -442 2518 187 71 2 chr2 11391158 11391650 -239296204 + L1MB5 LINE L1 5641 6166 -8 954 276 108 26 chr2 11391690 11392078 -239295776 + MLT1E2 LTR MaLR 205 624 -2 544 278 35 18 chr2 11392430 11392599 -239295255 + LTR16C LTR ERVL 179 350 -141 1503 201 60 6 chr2 11392602 11392916 -239294938 - MER45B DNA AcHobo 0 1040 710 544 203 32 8 chr2 11392919 11393042 -239294812 - MER45B DNA AcHobo -912 128 3 387 254 90 25 chr2 11393049 11393171 -239294683 + LTR16C LTR ERVL 352 481 -10 219 283 0 0 chr2 11394391 11394451 -239293403 + GA-rich Low_complexity Low_complexity 2 61 0 395 290 80 23 chr2 11394459 11394635 -239293219 + MIR SINE MIR 20 205 -57 21 71 0 0 chr2 11394670 11394712 -239293142 + AT_rich Low_complexity Low_complexity 1 42 0 288 284 55 31 chr2 11394904 11395031 -239292823 - L2 LINE L2 -2 3270 3141 210 325 0 38 chr2 11395869 11395949 -239291905 + MIR SINE MIR 48 124 -138 2672 36 0 3 chr2 11396151 11396458 -239291396 - AluY SINE Alu -5 306 1 2174 204 54 78 chr2 11396468 11396594 -239291260 - L1ME1 LINE L1 -5 6161 6034 930 117 0 0 chr2 11396594 11396722 -239291132 + L1PA10 LINE L1 6031 6158 -10 2174 204 54 78 chr2 11396722 11397226 -239290628 - L1ME1 LINE L1 -132 6034 5546 3464 176 47 43 chr2 11397235 11397980 -239289874 - L1MD1 LINE L1 0 6242 5495 189 0 0 0 chr2 11399385 11399406 -239288448 + (A)n Simple_repeat Simple_repeat 1 21 0 578 295 57 5 chr2 11399886 11400096 -239287758 - MIR SINE MIR -3 259 39 347 306 49 22 chr2 11400718 11400901 -239286953 + L2 LINE L2 2311 2498 -816 1090 249 9 0 chr2 11401169 11401398 -239286456 - MIR SINE MIR -10 252 22 360 185 126 89 chr2 11401477 11401612 -239286242 - MIR SINE MIR -83 179 40 307 336 25 16 chr2 11401718 11401840 -239286014 - MIR3 SINE MIR -3 205 83 203 0 37 0 chr2 11401987 11402014 -239285840 + (TC)n Simple_repeat Simple_repeat 1 28 0 1958 253 55 28 chr2 11403269 11404034 -239283820 - L1ME3 LINE L1 -42 6120 5292 269 250 14 0 chr2 11404032 11404104 -239283750 + L1M LINE L1 5323 5395 -769 * 744 311 86 17 chr2 11404755 11405106 -239282748 + MLT1I LTR MaLR 1 375 -34 299 274 163 26 chr2 11406266 11406419 -239281435 - Charlie8 DNA MER1_type -2190 227 54 850 284 135 48 chr2 11406754 11407241 -239280613 + L2 LINE L2 2216 2659 -654 192 111 0 0 chr2 11407241 11407277 -239280577 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 850 284 135 48 chr2 11407277 11407787 -239280067 + L2 LINE L2 2659 3297 -16 2446 145 31 3 chr2 11407787 11408179 -239279675 - MER57A LTR ERV1 0 403 1 850 284 135 48 chr2 11408179 11408197 -239279657 + L2 LINE L2 3297 3312 -1 1743 220 128 15 chr2 11408305 11408759 -239279095 + MLT1D LTR MaLR 1 505 0 2032 58 16 0 chr2 11408920 11409178 -239278676 + AluY SINE Alu 50 311 0 204 338 59 0 chr2 11409184 11409252 -239278602 + L2 LINE L2 3196 3267 -5 1622 152 27 0 chr2 11410052 11410315 -239277539 + AluJb SINE Alu 9 278 -34 276 30 0 0 chr2 11410320 11410353 -239277501 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 2104 88 36 0 chr2 11410520 11410829 -239277025 + AluSx SINE Alu 1 319 0 4352 128 14 2 chr2 11411757 11412384 -239275470 + MER41B LTR ERV1 1 635 0 184 364 99 13 chr2 11412722 11412873 -239274981 - MIR SINE MIR -50 212 49 2327 108 0 0 chr2 11412943 11413249 -239274605 - AluSq SINE Alu -5 308 3 22 0 0 0 chr2 11413256 11413278 -239274576 + AT_rich Low_complexity Low_complexity 1 22 0 1969 154 0 0 chr2 11413921 11414214 -239273640 + AluSx SINE Alu 1 293 -19 323 259 98 76 chr2 11414420 11414656 -239273198 - L1ME4a LINE L1 -51 6070 5830 207 240 0 52 chr2 11414656 11414681 -239273173 + (TA)n Simple_repeat Simple_repeat 1 26 -65 1851 161 7 3 chr2 11414681 11414979 -239272875 - AluSx SINE Alu -13 299 1 207 240 0 52 chr2 11414979 11415004 -239272850 + (TA)n Simple_repeat Simple_repeat 26 51 -40 2301 170 2 38 chr2 11415004 11415422 -239272432 + MER57A LTR ERV1 1 403 0 207 240 0 52 chr2 11415422 11415466 -239272388 + (TA)n Simple_repeat Simple_repeat 51 91 0 226 275 122 8 chr2 11415470 11415601 -239272253 - L1ME4a LINE L1 -1989 5819 5674 2530 164 143 2 chr2 11415623 11416079 -239271775 - MLT2B1 LTR ERVL 0 520 1 281 202 191 12 chr2 11416079 11416163 -239271691 - L1ME4a LINE L1 -462 5659 5561 985 287 54 58 chr2 11417096 11417817 -239270037 - L2 LINE L2 -11 3302 2587 239 277 79 20 chr2 11417932 11418033 -239269821 - MIR SINE MIR -136 126 20 378 325 96 25 chr2 11418340 11418537 -239269317 - MIR SINE MIR -2 260 50 2389 70 0 3 chr2 11420300 11420600 -239267254 - AluY SINE Alu -12 299 1 295 192 0 0 chr2 11421177 11421229 -239266625 + MIR SINE MIR 130 181 -81 21 0 0 0 chr2 11422833 11422854 -239265000 + AT_rich Low_complexity Low_complexity 1 21 0 197 234 47 0 chr2 11423510 11423574 -239264280 + MIR SINE MIR 84 150 -112 2311 100 20 0 chr2 11423725 11424025 -239263829 + AluSc SINE Alu 1 306 -3 366 335 47 82 chr2 11424259 11424578 -239263276 - L2 LINE L2 0 3272 2965 210 259 0 37 chr2 11425287 11425341 -239262513 - L2 LINE L2 -12 3301 3250 * 333 295 29 0 chr2 11425330 11425435 -239262419 - MIR SINE MIR -99 163 56 332 306 12 23 chr2 11426625 11426798 -239261056 + (TATG)n Simple_repeat Simple_repeat 3 173 0 294 188 6 50 chr2 11426813 11426973 -239260881 + (TA)n Simple_repeat Simple_repeat 1 153 0 419 266 9 9 chr2 11426986 11427099 -239260755 + (TATG)n Simple_repeat Simple_repeat 2 114 0 336 200 0 0 chr2 11427143 11427213 -239260641 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 248 261 0 31 chr2 11428083 11428148 -239259706 + MIR SINE MIR 127 189 -73 197 83 28 0 chr2 11429130 11429166 -239258688 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 207 252 27 90 chr2 11429174 11429285 -239258569 - L2 LINE L2 -20 3252 3149 * 216 221 29 0 chr2 11429281 11429349 -239258505 + MIR SINE MIR 147 216 -46 1560 182 3 20 chr2 11429352 11429648 -239258206 - AluJo SINE Alu -7 305 15 195 186 0 0 chr2 11430499 11430542 -239257312 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 755 189 124 0 chr2 11430948 11431086 -239256768 - L1MA9 LINE L1 0 6312 6148 288 0 0 0 chr2 11431086 11431118 -239256736 + (TG)n Simple_repeat Simple_repeat 1 32 0 755 189 124 0 chr2 11431118 11431148 -239256706 - L1MA9 LINE L1 -164 6148 6123 258 293 160 9 chr2 11431148 11431254 -239256600 - MIR3 SINE MIR -42 166 45 840 274 112 6 chr2 11432476 11432816 -239255038 - L1MC4 LINE L1 -197 7845 7470 963 232 82 44 chr2 11432819 11433243 -239254611 - MER45C DNA AcHobo 0 953 441 269 238 40 40 chr2 11433289 11433390 -239254464 - MIR3 SINE MIR -12 196 96 2305 122 0 0 chr2 11433950 11434261 -239253593 + AluSp SINE Alu 1 311 -2 259 346 60 22 chr2 11434975 11435157 -239252697 + L2 LINE L2 3082 3270 -2 302 258 32 11 chr2 11435490 11435583 -239252271 + L2 LINE L2 2942 3036 -236 378 310 113 31 chr2 11435587 11435816 -239252038 - MIR SINE MIR 0 262 15 190 125 0 0 chr2 11435813 11435845 -239252009 + L2 LINE L2 371 402 -2912 * 2231 102 0 16 chr2 11436868 11437183 -239250671 + AluSq SINE Alu 1 310 -3 389 259 15 53 chr2 11437191 11437322 -239250532 + MIR SINE MIR 71 196 -66 261 315 67 11 chr2 11437370 11437459 -239250395 + MIR3 SINE MIR 10 103 -105 902 175 0 110 chr2 11437657 11437885 -239249969 - MLT1B LTR MaLR -187 203 1 195 114 0 0 chr2 11438843 11438878 -239248976 + (A)n Simple_repeat Simple_repeat 1 35 0 356 272 123 0 chr2 11440421 11440535 -239247319 + MIR SINE MIR 25 152 -110 620 275 69 15 chr2 11440810 11441149 -239246705 - L2 LINE L2 -250 3063 2709 282 303 61 15 chr2 11441463 11441595 -239246259 - L2 LINE L2 -38 3234 3097 368 308 68 0 chr2 11442106 11442223 -239245631 - L2 LINE L2 -3 3269 3145 306 344 46 33 chr2 11442242 11442393 -239245461 + L3 LINE CR1 1269 1421 -156 2642 53 0 0 chr2 11443631 11443935 -239243919 - AluY SINE Alu -7 304 1 206 292 0 0 chr2 11444114 11444162 -239243692 + MIR SINE MIR 51 98 -164 180 0 0 0 chr2 11444995 11445015 -239242839 + (A)n Simple_repeat Simple_repeat 1 20 0 296 280 147 42 chr2 11445121 11445264 -239242590 - MIR3 SINE MIR -21 187 30 1711 164 34 24 chr2 11445874 11446166 -239241688 - AluSx SINE Alu -17 295 1 412 249 22 88 chr2 11446330 11446511 -239241343 - MER5B DNA MER1_type -6 172 4 691 196 12 6 chr2 11446887 11447050 -239240804 + L1MA7 LINE L1 6117 6280 -11 198 271 0 0 chr2 11447218 11447266 -239240588 + L2 LINE L2 3266 3313 0 220 330 186 0 chr2 11447713 11447928 -239239926 + L2 LINE L2 2279 2533 -781 180 0 0 0 chr2 11447932 11447952 -239239902 + (T)n Simple_repeat Simple_repeat 1 20 0 287 378 10 31 chr2 11449088 11449281 -239238573 - MER5A DNA MER1_type 0 189 1 242 290 57 53 chr2 11450545 11450790 -239237064 - L2 LINE L2 -188 3084 2839 276 296 103 78 chr2 11450906 11451382 -239236472 + L2 LINE L2 2383 2870 -444 265 300 0 0 chr2 11451602 11451672 -239236182 + L2 LINE L2 3244 3313 0 331 151 0 0 chr2 11451688 11451741 -239236113 - MLT2A2 LTR ERVL 0 453 401 288 229 0 0 chr2 11451744 11451827 -239236027 + (TA)n Simple_repeat Simple_repeat 1 83 0 311 244 47 0 chr2 11451836 11451922 -239235932 - L1MC4 LINE L1 -1339 6703 6614 449 258 0 8 chr2 11451928 11452458 -239235396 + (TA)n Simple_repeat Simple_repeat 1 525 0 323 202 0 91 chr2 11452462 11452561 -239235293 - L1MC4 LINE L1 -1339 6703 6614 240 130 0 0 chr2 11452573 11452619 -239235235 + (TA)n Simple_repeat Simple_repeat 2 47 0 2601 82 69 11 chr2 11452623 11452999 -239234855 - MLT2A1 LTR ERVL -46 398 1 1001 172 18 0 chr2 11453593 11453762 -239234092 + AluSg/x SINE Alu 128 299 -13 533 281 18 6 chr2 11454899 11455066 -239232788 + MER5B DNA MER1_type 6 174 -4 395 290 10 0 chr2 11455120 11455220 -239232634 - MER5A DNA MER1_type -80 109 9 1383 132 168 16 chr2 11455636 11455886 -239231968 - LTR18B LTR ERVL 0 614 327 1603 187 25 16 chr2 11456289 11456610 -239231244 + MLT1A1 LTR MaLR 24 347 -18 252 0 0 0 chr2 11457748 11457776 -239230078 + (TG)n Simple_repeat Simple_repeat 2 29 0 181 250 62 16 chr2 11458472 11458536 -239229318 - MIR SINE MIR -69 139 73 213 108 0 0 chr2 11458675 11458712 -239229142 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 1914 291 197 31 chr2 11458876 11460240 -239227614 + L2 LINE L2 115 1738 -1576 267 31 0 0 chr2 11460240 11460272 -239227582 + (CA)n Simple_repeat Simple_repeat 2 33 0 1914 291 197 31 chr2 11460272 11460368 -239227486 + L2 LINE L2 1738 1817 -1497 416 221 83 66 chr2 11460598 11460779 -239227075 - MLT1J1 LTR MaLR -241 205 22 326 232 0 49 chr2 11460772 11460854 -239227000 + MLT1J2 LTR MaLR 373 450 0 * 182 188 0 21 chr2 11461362 11461410 -239226444 + GA-rich Low_complexity Low_complexity 3 49 0 2210 304 96 23 chr2 11461567 11462932 -239224922 + L2 LINE L2 1842 3312 -1 6791 69 7 20 chr2 11463309 11465068 -239222786 - L1PA7 LINE L1 0 6154 4404 24971 109 13 19 chr2 11465068 11468818 -239219036 - L1PA7 LINE L1 -2408 3738 11 321 68 0 0 chr2 11469118 11469162 -239218692 + (TG)n Simple_repeat Simple_repeat 2 45 0 382 241 141 11 chr2 11469861 11470052 -239217802 + MIR SINE MIR 47 262 0 255 31 0 0 chr2 11470622 11470654 -239217200 + (TG)n Simple_repeat Simple_repeat 1 32 0 1918 222 181 62 chr2 11475213 11475938 -239211916 - MER21B LTR ERV1 -52 811 1 2287 121 0 0 chr2 11476464 11476770 -239211084 - AluSx SINE Alu -6 306 1 2189 100 14 3 chr2 11478144 11478433 -239209421 - AluSg SINE Alu -18 292 1 441 0 0 0 chr2 11479441 11479490 -239208364 + (TG)n Simple_repeat Simple_repeat 2 50 0 306 275 25 17 chr2 11479498 11479618 -239208236 - MER5A DNA MER1_type -34 155 35 352 301 52 20 chr2 11479710 11479863 -239207991 + L2 LINE L2 2924 3081 -232 285 271 121 7 chr2 11481331 11481471 -239206383 + MIR SINE MIR 69 224 -38 2368 97 3 0 chr2 11481499 11481807 -239206047 + AluY SINE Alu 1 309 -2 753 328 104 7 chr2 11481952 11482367 -239205487 + HAL1 LINE L1 4 458 -2049 434 71 0 62 chr2 11482369 11482482 -239205372 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 251 137 0 20 chr2 11482476 11482527 -239205327 + (TCTA)n Simple_repeat Simple_repeat 2 51 0 * 1249 62 6 6 chr2 11482528 11482705 -239205149 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 964 129 20 0 chr2 11482707 11482854 -239205000 - AluJo SINE Alu -7 305 156 659 146 10 0 chr2 11482854 11482957 -239204897 - AluJo SINE Alu -207 105 2 5574 169 42 18 chr2 11483095 11483566 -239204288 - L1MC1 LINE L1 -7 6326 5868 1580 118 5 0 chr2 11483566 11483787 -239204067 - AluSg/x SINE Alu -7 305 84 5574 169 42 18 chr2 11483787 11484443 -239203411 - L1MC1 LINE L1 -465 5868 5172 2474 81 0 3 chr2 11486495 11486802 -239201052 - AluSc SINE Alu -1 308 3 4737 237 83 57 chr2 11486826 11489806 -239198048 - L1MB8 LINE L1 -1 6988 3931 350 287 46 9 chr2 11490203 11490407 -239197447 - L1MB8 LINE L1 -6298 557 92 261 0 0 0 chr2 11491130 11491159 -239196695 + (TG)n Simple_repeat Simple_repeat 2 30 0 197 128 21 0 chr2 11491483 11491530 -239196324 + (CA)n Simple_repeat Simple_repeat 1 48 0 399 148 52 7 chr2 11491552 11491707 -239196147 + (CA)n Simple_repeat Simple_repeat 2 163 0 364 139 57 8 chr2 11491727 11491849 -239196005 + (CA)n Simple_repeat Simple_repeat 2 129 0 183 214 24 0 chr2 11492544 11492586 -239195268 - L2 LINE L2 -4 3309 3267 256 341 12 0 chr2 11493904 11493986 -239193868 - L2 LINE L2 -8 3264 3182 237 297 99 39 chr2 11494210 11494392 -239193462 - MIR SINE MIR -4 258 66 21 0 0 0 chr2 11494603 11494624 -239193230 + AT_rich Low_complexity Low_complexity 1 21 0 1407 167 13 99 chr2 11495046 11495310 -239192544 + AluJb SINE Alu 3 238 -74 3461 64 21 0 chr2 11495310 11495745 -239192109 - MLT2A1 LTR ERVL 0 444 1 1407 167 13 99 chr2 11495745 11495792 -239192062 + AluJb SINE Alu 238 287 -25 22 0 0 0 chr2 11496085 11496107 -239191747 + AT_rich Low_complexity Low_complexity 1 22 0 303 326 77 11 chr2 11496109 11496290 -239191564 + MIR SINE MIR 20 212 -50 285 336 38 0 chr2 11498012 11498143 -239189711 + MIR SINE MIR 121 256 -6 468 178 68 42 chr2 11499746 11499864 -239187990 + MER69 DNA AcHobo 6 126 -2400 924 186 67 74 chr2 11500130 11500303 -239187551 - MER21B LTR ERV1 -128 735 563 1755 114 41 131 chr2 11500303 11500715 -239187139 - THE1C LTR MaLR 0 375 1 924 186 67 74 chr2 11500715 11500810 -239187044 - MER21B LTR ERV1 -300 563 469 1403 194 20 14 chr2 11501662 11501955 -239185899 - L1MD1 LINE L1 0 6242 5948 355 148 0 0 chr2 11501964 11502025 -239185829 - L1MD1 LINE L1 -538 5704 5644 296 244 11 0 chr2 11502473 11502563 -239185291 + CT-rich Low_complexity Low_complexity 2 92 0 601 122 35 29 chr2 11502594 11502766 -239185088 + (TCTA)n Simple_repeat Simple_repeat 4 176 0 312 19 37 37 chr2 11502819 11502873 -239184981 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 213 241 0 0 chr2 11503317 11503371 -239184483 + CT-rich Low_complexity Low_complexity 2 55 0 265 147 15 29 chr2 11503402 11503470 -239184384 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 669 70 21 65 chr2 11503485 11503671 -239184183 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 601 276 18 18 chr2 11504226 11504443 -239183411 - L1ME3 LINE L1 -2 6160 5944 263 363 14 7 chr2 11504709 11504855 -239182999 - MIR3 SINE MIR -3 205 59 2346 168 8 3 chr2 11504955 11505343 -239182511 + MLT1B LTR MaLR 1 390 0 610 244 21 73 chr2 11505396 11505630 -239182224 - MIR SINE MIR -11 251 30 396 328 0 8 chr2 11508348 11508479 -239179375 + MIR SINE MIR 20 149 -113 662 293 52 4 chr2 11508724 11508953 -239178901 - MIR SINE MIR -22 240 1 204 40 0 0 chr2 11509327 11509352 -239178502 + (A)n Simple_repeat Simple_repeat 1 25 0 202 200 0 0 chr2 11509631 11509671 -239178183 + (TG)n Simple_repeat Simple_repeat 1 40 0 1319 232 21 26 chr2 11509920 11510260 -239177594 + MER46C DNA MER2_type 1 338 0 307 295 62 8 chr2 11510264 11510393 -239177461 - MIR SINE MIR -70 192 57 298 242 63 32 chr2 11510553 11510648 -239177206 + MER5A DNA MER1_type 9 106 -83 944 182 13 89 chr2 11511121 11511357 -239176497 - MER20 DNA MER1_type -1 218 1 423 223 140 70 chr2 11512786 11513086 -239174768 + MER5C DNA MER1_type 1 321 -3 1545 173 24 0 chr2 11513724 11513978 -239173876 + AluJo SINE Alu 36 295 -17 534 216 46 33 chr2 11514058 11514211 -239173643 + MIR SINE MIR 68 222 -40 865 261 29 86 chr2 11514503 11514981 -239172873 - L2 LINE L2 -2 3311 2861 1374 170 25 4 chr2 11515536 11515813 -239172041 + L1MA8 LINE L1 6006 6288 -3 387 277 34 0 chr2 11516170 11516289 -239171565 - MIR SINE MIR -56 152 30 215 327 40 30 chr2 11516461 11516562 -239171292 - L2 LINE L2 -32 3240 3139 440 291 43 52 chr2 11517363 11517597 -239170257 - MLT1J1 LTR MaLR -13 498 202 650 268 81 55 chr2 11517830 11518215 -239169639 + MLT1J LTR MaLR 114 508 -3 881 219 15 5 chr2 11518328 11518524 -239169330 - MER58A DNA MER1_type 0 224 27 1441 200 0 32 chr2 11518847 11519132 -239168722 + AluJb SINE Alu 1 276 -36 2164 104 14 3 chr2 11520825 11521114 -239166740 - AluSg SINE Alu -18 292 1 279 0 0 0 chr2 11522088 11522119 -239165735 + (CA)n Simple_repeat Simple_repeat 2 32 0 320 293 46 9 chr2 11522845 11523049 -239164805 + L1M4 LINE L1 92 557 -6298 418 333 35 7 chr2 11525196 11525337 -239162517 + MIR SINE MIR 20 164 -98 727 293 52 4 chr2 11525572 11525801 -239162053 - MIR SINE MIR -22 240 1 344 287 106 60 chr2 11527158 11527572 -239160282 - L1M4 LINE L1 -2374 3772 3340 399 291 0 18 chr2 11527738 11527848 -239160006 + L2 LINE L2 3201 3308 -5 2319 102 0 0 chr2 11529575 11529880 -239157974 - AluY SINE Alu -6 305 1 325 271 121 7 chr2 11529908 11530048 -239157806 - MIR SINE MIR -38 224 69 180 227 76 61 chr2 11530452 11530518 -239157336 - L2 LINE L2 -67 3246 3180 865 306 81 13 chr2 11532082 11532552 -239155302 + L1ME3A LINE L1 5334 5835 -335 318 157 0 0 chr2 11533164 11533214 -239154640 - MLT1A1 LTR MaLR 0 365 316 1775 183 30 11 chr2 11533214 11533575 -239154279 - MER73 LTR ERVL 0 644 277 1554 154 10 29 chr2 11533604 11533910 -239153944 - MER73 LTR ERVL -344 300 1 1112 209 67 47 chr2 11533910 11534207 -239153647 - MLT1A1 LTR MaLR -45 320 18 257 354 12 0 chr2 11535181 11535263 -239152591 - L2 LINE L2 -8 3264 3182 295 291 99 39 chr2 11535488 11535670 -239152184 - MIR SINE MIR -4 258 66 21 0 0 0 chr2 11535881 11535902 -239151952 + AT_rich Low_complexity Low_complexity 1 21 0 1942 128 0 73 chr2 11536328 11536656 -239151198 + AluSx SINE Alu 7 310 -2 1469 226 7 7 chr2 11537722 11538023 -239149831 - AluJb SINE Alu -1 301 1 3290 167 29 10 chr2 11538047 11538563 -239149291 + MER1A DNA MER1_type 1 526 -1 279 79 0 0 chr2 11538626 11538664 -239149190 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2027 112 3 18 chr2 11538666 11538951 -239148903 - AluSx SINE Alu -31 281 1 285 51 0 0 chr2 11538968 11539007 -239148847 + (TA)n Simple_repeat Simple_repeat 1 39 0 1222 67 6 6 chr2 11540760 11540939 -239146915 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 929 136 20 0 chr2 11540941 11541088 -239146766 - AluJo SINE Alu -7 305 156 702 146 10 0 chr2 11541088 11541191 -239146663 - AluJo SINE Alu -207 105 2 2344 168 86 17 chr2 11541329 11541804 -239146050 - L1MC1 LINE L1 -7 6326 5819 1363 152 5 0 chr2 11541804 11542021 -239145833 - AluSg/x SINE Alu -11 299 82 3072 197 12 3 chr2 11542021 11542676 -239145178 - L1MC1 LINE L1 -501 5832 5172 8105 139 104 35 chr2 11544594 11546064 -239141790 - THE1C-int LTR MaLR -9 1571 1 2325 154 11 16 chr2 11546064 11546441 -239141413 - THE1C LTR MaLR 0 375 1 702 260 116 0 chr2 11546551 11546886 -239140968 - L1MEc LINE L1 -5285 1111 738 505 303 31 65 chr2 11546978 11547361 -239140493 - L1MEc LINE L1 -5918 478 109 400 263 9 26 chr2 11547356 11547470 -239140384 + L1ME1 LINE L1 6060 6330 -4 * 237 257 162 54 chr2 11547527 11547749 -239140105 + L1M4 LINE L1 4740 4985 -1161 490 118 0 0 chr2 11547780 11547848 -239140006 - AluS SINE Alu -240 69 2 1913 219 180 63 chr2 11552646 11553372 -239134482 - MER21B LTR ERV1 -52 811 1 2243 124 0 0 chr2 11553898 11554204 -239133650 - AluSx SINE Alu -6 306 1 196 279 62 47 chr2 11555263 11555392 -239132462 + MER5C DNA MER1_type 21 151 -173 450 291 43 52 chr2 11555408 11555642 -239132212 - MLT1J1 LTR MaLR -13 498 202 674 270 75 49 chr2 11555875 11556260 -239131594 + MLT1J LTR MaLR 114 508 -3 1132 187 5 5 chr2 11556373 11556571 -239131283 - MER58A DNA MER1_type 0 224 27 1784 139 0 28 chr2 11556894 11557181 -239130673 + AluJb SINE Alu 1 279 -33 181 370 30 10 chr2 11557402 11557502 -239130352 + MIR SINE MIR 93 194 -68 399 291 0 18 chr2 11560007 11560117 -239127737 - L2 LINE L2 -5 3308 3201 296 287 109 63 chr2 11560283 11560697 -239127157 + L1M4 LINE L1 3340 3772 -2374 2612 151 17 2 chr2 11561505 11561923 -239125931 - L1MB1 LINE L1 0 6168 5745 563 105 35 0 chr2 11561923 11562009 -239125845 + L1M3 LINE L1 5402 5490 -844 1305 170 74 22 chr2 11562011 11562345 -239125509 + MSTD LTR MaLR 1 396 0 1337 155 8 45 chr2 11562345 11562590 -239125264 + L1M3 LINE L1 5498 5733 -601 246 327 63 20 chr2 11562690 11562789 -239125065 + MIR SINE MIR 61 164 -44 203 270 27 40 chr2 11563989 11564063 -239123791 + MIR SINE MIR 117 189 -73 2481 137 8 14 chr2 11564949 11565315 -239122539 - THE1B LTR MaLR 0 364 1 1797 264 106 11 chr2 11565435 11565962 -239121892 - MLT1E LTR MaLR -7 586 10 202 356 74 18 chr2 11566087 11566250 -239121604 + L2 LINE L2 2590 2761 -553 24 0 0 0 chr2 11566807 11566831 -239121023 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr2 11567836 11567861 -239119993 + (A)n Simple_repeat Simple_repeat 1 25 0 229 175 0 48 chr2 11568336 11568379 -239119475 + (TTCA)n Simple_repeat Simple_repeat 1 42 -18 907 217 56 0 chr2 11568379 11568577 -239119277 + MER3 DNA MER1_type 1 209 0 229 175 0 48 chr2 11568577 11568596 -239119258 + (TTCA)n Simple_repeat Simple_repeat 42 60 0 25 0 0 0 chr2 11568809 11568834 -239119020 + AT_rich Low_complexity Low_complexity 1 25 0 318 26 0 0 chr2 11570320 11570359 -239117495 + (TG)n Simple_repeat Simple_repeat 2 40 0 238 320 39 0 chr2 11570574 11570677 -239117177 + L3b LINE CR1 1241 1347 -236 268 276 33 98 chr2 11570745 11571020 -239116834 - L2 LINE L2 -187 3085 2829 2592 110 123 5 chr2 11573168 11573551 -239114303 + MSTA LTR MaLR 1 428 0 2466 88 0 0 chr2 11573861 11574169 -239113685 - AluSc SINE Alu -1 308 1 2294 139 55 31 chr2 11574688 11575106 -239112748 + MSTA LTR MaLR 1 428 0 188 316 98 60 chr2 11575118 11575251 -239112603 + L2 LINE L2 3127 3264 -8 254 207 0 0 chr2 11575368 11575426 -239112428 + L1MC4 LINE L1 6647 6704 -1338 333 215 15 0 chr2 11575620 11575685 -239112169 + L2 LINE L2 3193 3258 -55 391 202 55 55 chr2 11576261 11576444 -239111410 + L1MC5 LINE L1 7624 7806 -155 234 322 28 18 chr2 11576615 11576748 -239111106 - MIR3 SINE MIR -42 166 45 753 135 21 64 chr2 11576997 11577136 -239110718 + LTR39 LTR ERV1 2 134 -649 3562 139 214 13 chr2 11577136 11577906 -239109948 + MER21A LTR ERV1 1 925 -6 622 93 10 0 chr2 11577915 11578012 -239109842 + LTR39 LTR ERV1 133 230 -553 3701 153 21 40 chr2 11578015 11578740 -239109114 + MER50 LTR ERV1 1 711 -23 2746 184 12 38 chr2 11578778 11578985 -239108869 + LTR39 LTR ERV1 223 434 -349 2242 114 3 0 chr2 11578985 11579284 -239108570 - AluSx SINE Alu -12 300 1 2746 184 12 38 chr2 11579284 11579652 -239108202 + LTR39 LTR ERV1 434 783 0 2324 226 41 18 chr2 11581102 11581709 -239106145 + MLT1E2 LTR MaLR 1 621 -5 991 113 0 0 chr2 11581794 11581935 -239105919 + AluSc SINE Alu 168 308 -1 311 354 39 50 chr2 11582673 11582854 -239105000 - L1MEc LINE L1 -6024 372 194 1877 166 3 3 chr2 11582859 11583160 -239104694 - AluJb SINE Alu -3 309 9 3171 140 34 6 chr2 11583190 11583697 -239104157 + MER1A DNA MER1_type 1 521 -8 315 71 0 0 chr2 11583769 11583811 -239104043 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 2022 112 3 18 chr2 11583813 11584098 -239103756 - AluSx SINE Alu -31 281 1 363 23 0 0 chr2 11584114 11584158 -239103696 + (TA)n Simple_repeat Simple_repeat 1 44 0 1894 144 0 72 chr2 11586488 11586821 -239101033 - AluSx SINE Alu -2 310 2 1385 188 44 44 chr2 11586860 11587180 -239100674 + MLT1A1 LTR MaLR 1 320 -45 1440 149 10 36 chr2 11587180 11587488 -239100366 + MER73 LTR ERVL 1 300 -344 1653 177 28 11 chr2 11587517 11587879 -239099975 + MER73 LTR ERVL 277 644 0 292 157 0 0 chr2 11587879 11587929 -239099925 + MLT1A1 LTR MaLR 316 365 0 942 297 56 18 chr2 11588566 11589434 -239098420 - L1ME LINE L1 -354 5808 4906 355 263 9 26 chr2 11589629 11589743 -239098111 - L1ME1 LINE L1 -4 6330 6060 * 425 311 34 48 chr2 11589738 11590031 -239097823 + L1MEc LINE L1 109 397 -5999 572 260 116 0 chr2 11590213 11590548 -239097306 + L1MEc LINE L1 738 1111 -5285 2169 151 11 16 chr2 11590658 11591035 -239096819 + THE1C LTR MaLR 1 375 0 7565 138 105 35 chr2 11591035 11592507 -239095347 + THE1C-int LTR MaLR 1 1574 -6 2023 168 16 16 chr2 11592513 11592888 -239094966 + THE1C LTR MaLR 1 375 0 2254 131 8 37 chr2 11593226 11593601 -239094253 - THE1B LTR MaLR 0 364 1 182 288 34 85 chr2 11593958 11594011 -239093843 + MIR SINE MIR 21 75 -187 2023 154 10 46 chr2 11594011 11594400 -239093454 + THE1C LTR MaLR 1 375 0 182 288 34 85 chr2 11594400 11594464 -239093390 + MIR SINE MIR 75 132 -130 2011 164 0 0 chr2 11595268 11595566 -239092288 - AluSx SINE Alu -14 298 1 23 78 0 0 chr2 11595914 11595965 -239091889 + AT_rich Low_complexity Low_complexity 1 51 0 306 209 23 23 chr2 11596187 11596273 -239091581 - MLT1J2 LTR MaLR -2 448 363 1317 203 137 34 chr2 11597260 11597704 -239090150 - L1MC5 LINE L1 -499 7462 6973 348 24 0 0 chr2 11598079 11598120 -239089734 + (GA)n Simple_repeat Simple_repeat 2 42 0 526 312 17 0 chr2 11598137 11598310 -239089544 - MLT1J2 LTR MaLR -274 176 1 281 182 82 39 chr2 11599605 11599718 -239088136 - MLT1J2 LTR MaLR -2 444 336 792 190 40 6 chr2 11599919 11600093 -239087761 + MER3 DNA MER1_type 1 180 -29 1574 70 8 66 chr2 11600388 11600632 -239087222 + MER30 DNA MER1_type 1 230 0 2213 126 0 13 chr2 11601690 11601999 -239085855 - AluSx SINE Alu -7 305 1 184 265 78 59 chr2 11602712 11602814 -239085040 + MIR SINE MIR 33 136 -72 226 345 103 0 chr2 11603671 11603787 -239084067 + L1MC/D LINE L1 5518 5645 -2163 411 56 0 0 chr2 11603934 11603988 -239083866 + (TG)n Simple_repeat Simple_repeat 2 55 0 349 305 85 61 chr2 11603991 11604237 -239083617 + L3 LINE CR1 923 1174 -403 1599 190 13 13 chr2 11604798 11605103 -239082751 + AluJo SINE Alu 1 305 -7 1215 246 40 70 chr2 11605119 11605549 -239082305 + MLT1J LTR MaLR 95 511 0 258 247 35 0 chr2 11605994 11606079 -239081775 - HAL1 LINE L1 -343 2164 2077 568 371 96 19 chr2 11606379 11606743 -239081111 - HAL1 LINE L1 -581 1926 1535 645 306 27 27 chr2 11607463 11607724 -239080130 + MIR SINE MIR 2 262 0 1312 243 41 17 chr2 11608162 11608578 -239079276 + MER31A LTR ERV1 56 481 -4 30 27 0 0 chr2 11609089 11609126 -239078728 + AT_rich Low_complexity Low_complexity 1 37 0 341 226 108 0 chr2 11610049 11610151 -239077703 + L2 LINE L2 1906 2018 -1296 202 330 115 35 chr2 11610175 11610436 -239077418 + L2 LINE L2 2157 2438 -876 225 206 0 0 chr2 11610823 11610886 -239076968 - L1MB8 LINE L1 -237 5941 5879 2435 171 5 18 chr2 11610954 11611394 -239076460 - Tigger2a DNA MER2_type 0 434 1 320 344 73 9 chr2 11611426 11611743 -239076111 - L1MB8 LINE L1 -335 5835 5499 2873 241 70 35 chr2 11611747 11613227 -239074627 - L1MEc LINE L1 -3125 3004 1513 833 110 123 7 chr2 11613232 11613387 -239074467 - LTR47A LTR ERVL -6 446 274 272 191 0 32 chr2 11613648 11613711 -239074143 - L1MEc LINE L1 -4764 1367 1307 587 281 63 24 chr2 11613790 11614043 -239073811 - LTR16C LTR ERVL -36 455 193 792 236 73 20 chr2 11614489 11614887 -239072967 - L1MEc LINE L1 -2962 3167 2749 258 305 36 6 chr2 11614870 11615037 -239072817 - HAL1 LINE L1 -1221 1286 1115 * 270 279 60 60 chr2 11615462 11615645 -239072209 - L1MEc LINE L1 -5638 481 299 279 0 0 0 chr2 11615784 11615815 -239072039 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 360 277 26 52 chr2 11615851 11616006 -239071848 - L1MEc LINE L1 -5966 153 3 342 294 159 23 chr2 11616212 11616426 -239071428 - MIR SINE MIR -11 251 9 1409 136 11 11 chr2 11616895 11617159 -239070695 + L1MA9 LINE L1 6043 6306 -6 195 100 0 0 chr2 11617160 11617190 -239070664 + (TA)n Simple_repeat Simple_repeat 2 31 0 1501 209 47 70 chr2 11618250 11618301 -239069553 + MLT1A1 LTR MaLR 1 52 -313 2329 100 3 3 chr2 11618301 11618612 -239069242 + AluSp SINE Alu 1 311 -2 1501 209 47 70 chr2 11618612 11618943 -239068911 + MLT1A1 LTR MaLR 52 365 0 2327 118 0 0 chr2 11619441 11619747 -239068107 - AluSq SINE Alu -7 306 1 2104 105 0 52 chr2 11619751 11620057 -239067797 - AluSc SINE Alu -19 290 1 275 188 0 0 chr2 11620106 11620170 -239067684 + MER53 DNA DNA 98 161 -28 * 295 242 11 0 chr2 11620113 11620204 -239067650 - MER53 DNA DNA -94 95 4 362 303 28 9 chr2 11620271 11620380 -239067474 + MIR SINE MIR 40 150 -112 498 299 140 43 chr2 11620429 11620449 -239067405 + MLT1J2 LTR MaLR 44 61 -389 2091 145 22 27 chr2 11620449 11620815 -239067039 + THE1B LTR MaLR 1 364 0 498 299 140 43 chr2 11620815 11621056 -239066798 + MLT1J2 LTR MaLR 61 354 -96 207 0 0 0 chr2 11621056 11621079 -239066775 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 498 299 140 43 chr2 11621079 11621187 -239066667 + MLT1J2 LTR MaLR 354 450 0 818 204 0 12 chr2 11621983 11622155 -239065699 - MLT1B LTR MaLR 0 467 298 21 0 0 0 chr2 11622231 11622252 -239065602 + AT_rich Low_complexity Low_complexity 1 21 0 677 188 18 100 chr2 11622252 11622422 -239065432 - FRAM SINE Alu -21 155 1 904 146 58 6 chr2 11622423 11622594 -239065260 - MLT1B LTR MaLR -210 180 1 417 180 0 0 chr2 11623088 11623177 -239064677 + (TA)n Simple_repeat Simple_repeat 1 89 0 52 17 0 0 chr2 11623177 11623236 -239064618 + AT_rich Low_complexity Low_complexity 1 59 0 721 197 0 0 chr2 11623237 11623359 -239064495 - FLAM_C SINE Alu -11 122 1 281 247 12 0 chr2 11623811 11623892 -239063962 + MLT1J1 LTR MaLR 364 445 -1 452 256 65 33 chr2 11624132 11624328 -239063526 - MIR3 SINE MIR 0 208 1 536 282 13 6 chr2 11624409 11624565 -239063289 + MIR SINE MIR 54 210 -52 233 393 12 24 chr2 11625101 11625269 -239062585 - MIR SINE MIR -50 212 47 355 184 70 0 chr2 11626025 11626139 -239061715 - MER69 DNA AcHobo -91 2435 2314 640 287 84 24 chr2 11626184 11626435 -239061419 + L2 LINE L2 3045 3310 -3 309 321 60 36 chr2 11626690 11626858 -239060996 + L2 LINE L2 2118 2289 -1025 261 263 53 11 chr2 11627838 11627933 -239059921 + HAL1b LINE L1 669 767 -581 758 265 78 81 chr2 11628218 11628322 -239059532 + L1MC4a LINE L1 5266 5369 -2439 1849 165 13 3 chr2 11628322 11628625 -239059229 + AluJb SINE Alu 1 306 -6 758 265 78 81 chr2 11628625 11629185 -239058669 + L1MC4a LINE L1 5369 5928 -1880 200 304 104 44 chr2 11629256 11629391 -239058463 - MIR3 SINE MIR -65 143 1 199 378 76 43 chr2 11629391 11629678 -239058176 - L2 LINE L2 -47 3225 2929 249 83 0 0 chr2 11629678 11629714 -239058140 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 826 341 106 20 chr2 11629714 11630316 -239057538 - L2 LINE L2 -6 3307 2600 1940 92 30 4 chr2 11630316 11630578 -239057276 + AluSq SINE Alu 36 304 -9 826 341 106 20 chr2 11630578 11630825 -239057029 - L2 LINE L2 -713 2600 2376 25 0 0 0 chr2 11631008 11631033 -239056821 + AT_rich Low_complexity Low_complexity 1 25 0 442 256 41 58 chr2 11631040 11631212 -239056642 - MIR SINE MIR -73 189 21 185 180 20 0 chr2 11631236 11631286 -239056568 + CT-rich Low_complexity Low_complexity 1 51 0 1077 210 53 3 chr2 11631311 11631639 -239056215 - MER33 DNA MER1_type -19 305 1 2059 165 71 15 chr2 11631730 11632137 -239055717 - MSTB1 LTR MaLR 0 432 3 560 239 11 64 chr2 11633206 11633394 -239054460 + MER5B DNA MER1_type 1 178 0 542 209 15 0 chr2 11633502 11633636 -239054218 - Charlie1 DNA MER1_type 0 2761 2626 3550 166 27 11 chr2 11633677 11634334 -239053520 - MSTA-int LTR MaLR -983 668 1 2601 167 7 0 chr2 11634334 11634759 -239053095 - MSTA LTR MaLR 0 428 1 26 0 0 0 chr2 11635830 11635856 -239051998 + AT_rich Low_complexity Low_complexity 1 26 0 1827 151 0 14 chr2 11635856 11636147 -239051707 - AluSx SINE Alu -25 287 1 289 247 93 41 chr2 11636154 11636251 -239051603 + MIR SINE MIR 74 175 -87 200 274 48 0 chr2 11636632 11636694 -239051160 - MIR SINE MIR -117 145 81 1156 80 0 12 chr2 11636847 11637010 -239050844 - L1PA7 LINE L1 0 6154 5994 24 0 0 0 chr2 11637303 11637327 -239050527 + AT_rich Low_complexity Low_complexity 1 24 0 1729 168 30 0 chr2 11637606 11637945 -239049909 - MLT1B LTR MaLR 0 390 42 339 263 34 69 chr2 11638087 11638262 -239049592 + L1ME LINE L1 1030 1198 -5174 293 273 81 41 chr2 11638266 11638758 -239049096 + L1ME LINE L1 1101 1589 -4793 278 270 74 20 chr2 11638887 11639035 -239048819 - L1MC4a LINE L1 -1799 6009 5854 804 287 61 48 chr2 11639575 11640479 -239047375 - L1MEc LINE L1 -4602 2223 1148 458 405 25 25 chr2 11640928 11641325 -239046529 - L1MEc LINE L1 -5857 968 572 331 292 77 32 chr2 11641410 11641787 -239046067 + L1ME LINE L1 2346 2739 -3643 * 1228 260 53 80 chr2 11641786 11642410 -239045444 - L1MEc LINE L1 -5931 611 5 676 267 39 41 chr2 11642953 11643541 -239044313 - L1MEc LINE L1 -2974 3376 2708 300 221 123 26 chr2 11643780 11643934 -239043920 - L1MEc LINE L1 -4093 2438 2270 538 315 110 67 chr2 11644156 11644591 -239043263 - L1MEc LINE L1 -4581 1950 1497 238 258 31 10 chr2 11644596 11644693 -239043161 - L1ME LINE L1 -4553 1728 1630 420 288 57 36 chr2 11644696 11644934 -239042920 - L1ME LINE L1 -5009 1345 1115 2534 59 0 0 chr2 11644934 11645238 -239042616 + AluY SINE Alu 3 306 -5 420 288 57 36 chr2 11645238 11645277 -239042577 - L1ME LINE L1 -5239 1115 1078 1433 183 14 57 chr2 11645984 11646333 -239041521 + MLT1A1 LTR MaLR 1 334 -31 311 266 88 24 chr2 11647819 11647974 -239039880 - MIR SINE MIR -63 145 27 280 259 137 61 chr2 11648547 11648744 -239039110 - MIR SINE MIR -11 251 40 2354 101 0 0 chr2 11648745 11649051 -239038803 - AluSx SINE Alu -6 306 1 1952 138 51 28 chr2 11649075 11649431 -239038423 + THE1B LTR MaLR 1 364 0 206 328 0 0 chr2 11650491 11650549 -239037305 + L2 LINE L2 3215 3272 0 277 322 37 39 chr2 11650933 11651238 -239036616 - L2 LINE L2 -238 3034 2670 307 378 35 21 chr2 11652129 11652272 -239035582 - L2 LINE L2 -1 3271 3127 932 240 137 35 chr2 11652283 11652875 -239034979 - Charlie7 DNA MER1_type 0 2612 1961 4105 208 52 18 chr2 11652890 11653036 -239034818 + L1MB5 LINE L1 4108 4248 -1926 195 42 0 0 chr2 11653036 11653060 -239034794 + (CA)n Simple_repeat Simple_repeat 1 24 0 4105 208 52 18 chr2 11653060 11654906 -239032948 + L1MB5 LINE L1 4248 6167 -7 3953 198 56 6 chr2 11654906 11655885 -239031969 + MER45R DNA AcHobo 551 1578 -3 2656 187 19 67 chr2 11656288 11656931 -239030923 - LTR9 LTR ERV1 0 612 1 294 315 109 36 chr2 11657767 11657932 -239029922 + MIR SINE MIR 86 262 0 252 308 49 53 chr2 11658639 11658816 -239029038 + MIR SINE MIR 16 190 -57 1934 116 87 0 chr2 11659943 11660218 -239027636 - AluSx SINE Alu -13 299 1 623 327 137 27 chr2 11660218 11660692 -239027162 - L1MDa LINE L1 -4449 2091 1566 290 348 78 16 chr2 11661339 11661595 -239026259 - L2 LINE L2 -812 2502 2231 1192 183 5 5 chr2 11661774 11662021 -239025833 + AluJb SINE Alu 81 327 0 305 333 8 15 chr2 11662067 11662199 -239025655 + MIR3 SINE MIR 71 201 -7 4869 61 8 2 chr2 11662432 11663054 -239024800 + L1PA7 LINE L1 5527 6152 -2 314 331 101 22 chr2 11663372 11663511 -239024343 + L2 LINE L2 3122 3271 -1 419 345 46 11 chr2 11664738 11664912 -239022942 + MIR SINE MIR 47 226 -36 302 205 13 77 chr2 11664914 11664992 -239022862 - MIR3 SINE MIR -42 166 94 236 312 66 9 chr2 11665043 11665151 -239022703 - MIR SINE MIR -110 98 22 218 277 90 77 chr2 11665473 11665628 -239022226 + MIR SINE MIR 48 204 -58 254 308 39 0 chr2 11665844 11665922 -239021932 + MIR SINE MIR 118 198 -64 222 309 52 21 chr2 11667431 11667528 -239020326 + MIR SINE MIR 72 171 -91 198 258 200 71 chr2 11668051 11668206 -239019648 + MIR SINE MIR 88 262 0 22 0 0 0 chr2 11668571 11668593 -239019261 + AT_rich Low_complexity Low_complexity 1 22 0 2220 136 21 104 chr2 11669513 11669984 -239017870 - MSTB1 LTR MaLR 0 432 1 408 311 25 0 chr2 11670373 11670492 -239017362 - L2 LINE L2 -15 3298 3177 188 344 115 8 chr2 11670567 11670689 -239017165 + L2 LINE L2 2627 2761 -553 363 300 67 29 chr2 11671542 11671752 -239016102 - L2 LINE L2 -371 2943 2726 230 366 0 9 chr2 11672223 11672335 -239015519 - MER91C DNA MER1_type 0 140 30 182 245 151 0 chr2 11672734 11672787 -239015067 + L2 LINE L2 3161 3221 -51 279 0 0 0 chr2 11672876 11672907 -239014947 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 220 307 80 13 chr2 11673668 11673743 -239014111 - L2 LINE L2 -27 3245 3166 4740 162 29 46 chr2 11673856 11674743 -239013111 + MER4D LTR ERV1 1 872 0 218 231 77 0 chr2 11674756 11674808 -239013046 + MIR SINE MIR 93 148 -60 465 125 0 0 chr2 11676010 11676082 -239011772 - L1P LINE L1 -747 5409 5338 4926 121 23 6 chr2 11676083 11676811 -239011043 + L1PA16 LINE L1 5426 6166 0 1699 187 59 44 chr2 11676811 11677191 -239010663 + Charlie1 DNA MER1_type 2149 2540 -221 2337 54 4 0 chr2 11677191 11677495 -239010359 + AluY SINE Alu 2 306 0 1699 187 59 44 chr2 11677495 11677588 -239010266 + Charlie1 DNA MER1_type 2540 2630 -131 306 344 52 28 chr2 11677791 11678154 -239009700 - HAL1b LINE L1 -809 539 168 260 280 129 8 chr2 11680305 11680437 -239007417 + MIR3 SINE MIR 40 187 -21 316 350 55 31 chr2 11680578 11680741 -239007113 + L2 LINE L2 3096 3262 -10 272 297 0 14 chr2 11680993 11681067 -239006787 - L2 LINE L2 0 3272 3200 1975 153 3 0 chr2 11681637 11681937 -239005917 - AluJb SINE Alu -11 301 1 182 216 27 0 chr2 11682125 11682162 -239005692 + MIR SINE MIR 85 122 -140 1629 201 23 50 chr2 11684837 11685221 -239002633 - MLT1A2 LTR MaLR 0 374 1 1513 161 50 101 chr2 11685294 11685672 -239002182 + MLT1A1 LTR MaLR 5 363 -2 410 280 62 101 chr2 11686493 11686685 -239001169 - L2 LINE L2 0 3272 3074 3383 187 94 13 chr2 11686685 11687358 -239000496 - LTR8A LTR ERV1 0 727 1 410 280 62 101 chr2 11687358 11687899 -238999955 - L2 LINE L2 -198 3074 2551 319 309 99 25 chr2 11689098 11689341 -238998513 + MIR SINE MIR 2 262 0 214 338 14 14 chr2 11689865 11689939 -238997915 + MIR SINE MIR 21 94 -114 237 65 0 0 chr2 11690710 11690741 -238997113 + (A)n Simple_repeat Simple_repeat 1 31 0 183 421 33 8 chr2 11691635 11691756 -238996098 - L2 LINE L2 -1 3271 3148 265 381 24 0 chr2 11692140 11692266 -238995588 - L2 LINE L2 -212 3060 2932 290 241 213 21 chr2 11692847 11692988 -238994866 + MIR3 SINE MIR 36 203 -5 197 347 165 0 chr2 11693077 11693198 -238994656 - MIR SINE MIR -16 246 106 1088 232 66 74 chr2 11693769 11694149 -238993705 - MLT1B LTR MaLR -4 386 10 447 289 39 56 chr2 11694249 11694350 -238993504 + MER5B DNA MER1_type 2 103 -75 2051 151 74 57 chr2 11694350 11694389 -238993465 - MLT2D LTR ERVL 0 414 377 384 22 0 0 chr2 11694389 11694434 -238993420 + (TG)n Simple_repeat Simple_repeat 2 46 0 2051 151 74 57 chr2 11694434 11694798 -238993056 - MLT2D LTR ERVL -37 377 4 447 289 39 56 chr2 11694798 11694810 -238993044 + MER5B DNA MER1_type 103 114 -64 2187 117 0 16 chr2 11694810 11695119 -238992735 - AluSx SINE Alu -8 304 1 447 289 39 56 chr2 11695119 11695184 -238992670 + MER5B DNA MER1_type 114 178 0 366 198 76 151 chr2 11695310 11695482 -238992372 - MER5B DNA MER1_type -3 175 17 183 125 75 25 chr2 11696343 11696383 -238991471 - MIR SINE MIR -185 77 36 498 218 0 0 chr2 11696416 11696572 -238991282 + (CA)n Simple_repeat Simple_repeat 2 157 0 291 324 65 74 chr2 11696574 11697019 -238990835 - L2 LINE L2 -13 3259 2819 2363 105 0 0 chr2 11697353 11697657 -238990197 + AluSx SINE Alu 1 304 -8 194 429 14 23 chr2 11697704 11697923 -238989931 + L2 LINE L2 2867 3083 -189 2169 173 52 26 chr2 11698246 11698667 -238989187 + MSTB1 LTR MaLR 1 432 0 1881 176 0 0 chr2 11699107 11699402 -238988452 + AluJo SINE Alu 1 295 -17 424 275 101 7 chr2 11700397 11700546 -238987308 - MLT1L LTR MaLR -123 492 330 7073 97 34 3 chr2 11701317 11702347 -238985507 + L1MA1 LINE L1 5238 6298 -4 2374 78 7 0 chr2 11702840 11703136 -238984718 + AluY SINE Alu 1 298 -13 311 263 150 15 chr2 11703143 11703276 -238984578 - MIR3 SINE MIR -28 180 30 1833 156 17 0 chr2 11703604 11703771 -238984083 - AluSx SINE Alu -12 300 124 279 0 0 0 chr2 11703771 11703802 -238984052 + (TG)n Simple_repeat Simple_repeat 2 32 0 1833 156 17 0 chr2 11703802 11703929 -238983925 - AluSx SINE Alu -188 124 1 355 313 53 0 chr2 11704079 11704210 -238983644 - MIR SINE MIR -37 225 88 1137 245 66 78 chr2 11706647 11707071 -238980783 + MLT1H LTR MaLR 3 421 -128 357 330 38 16 chr2 11707173 11707358 -238980496 - L2 LINE L2 -477 2837 2649 437 269 31 51 chr2 11708623 11708809 -238979045 - MIR SINE MIR -78 130 3 184 254 84 28 chr2 11708815 11708886 -238978968 - MIR3 SINE MIR -53 155 81 551 234 16 0 chr2 11709663 11709787 -238978067 - MER45A DNA AcHobo 0 178 53 367 343 12 35 chr2 11709994 11710166 -238977688 - MIR3 SINE MIR -37 171 4 273 323 129 46 chr2 11711132 11711349 -238976505 + L2 LINE L2 2185 2419 -895 515 289 109 0 chr2 11711558 11711714 -238976140 - MIR SINE MIR -84 178 6 1907 197 7 61 chr2 11711715 11712126 -238975728 + MLT1B LTR MaLR 2 390 0 201 245 0 0 chr2 11712834 11712883 -238974971 + (TGAA)n Simple_repeat Simple_repeat 3 51 0 267 248 50 50 chr2 11712905 11713026 -238974828 - LTR67 LTR ERVL -8 549 429 1360 209 26 11 chr2 11713862 11714135 -238973719 - AluJo SINE Alu -30 282 6 258 300 17 0 chr2 11714549 11714654 -238973200 + MIR SINE MIR 59 166 -64 1427 194 101 44 chr2 11714673 11715039 -238972815 - L1MB2 LINE L1 0 6171 5785 * 1450 215 34 11 chr2 11715037 11715419 -238972435 - L1M4c LINE L1 -3987 2397 2007 941 178 7 0 chr2 11715447 11715599 -238972255 - FRAM SINE Alu -30 146 1 455 230 0 58 chr2 11715609 11715748 -238972106 - L1M4c LINE L1 -4479 1905 1775 23 33 0 0 chr2 11715759 11715789 -238972065 + AT_rich Low_complexity Low_complexity 1 30 0 3411 11 0 0 chr2 11716149 11716526 -238971328 - L1HS LINE L1 -2 6153 5777 4526 21 0 0 chr2 11716526 11717049 -238970805 + L1P LINE L1 4245 4767 -1379 292 283 61 10 chr2 11717682 11717781 -238970073 + MIR SINE MIR 44 147 -61 2861 142 12 25 chr2 11718930 11719415 -238968439 + L1MA5 LINE L1 5812 6290 -10 251 336 185 14 chr2 11719576 11719722 -238968132 - MIR SINE MIR -64 144 22 200 323 95 13 chr2 11720229 11720387 -238967467 + MIR SINE MIR 86 256 -6 227 327 89 71 chr2 11720602 11720770 -238967084 - MIR SINE MIR -75 187 17 266 320 76 33 chr2 11723477 11723628 -238964226 + MIR3 SINE MIR 1 162 -66 240 278 106 33 chr2 11724056 11724207 -238963647 + MIR SINE MIR 48 209 -53 204 349 48 60 chr2 11724877 11724960 -238962894 - L2 LINE L2 -29 3243 3162 * 348 372 31 21 chr2 11724955 11725146 -238962708 - L2 LINE L2 -568 2746 2554 635 295 74 9 chr2 11725177 11725394 -238962460 - MIR SINE MIR -14 248 18 944 268 15 7 chr2 11725799 11726068 -238961786 - L1ME LINE L1 -505 5661 5391 5179 123 80 5 chr2 11726078 11726924 -238960930 - Tigger1 DNA MER2_type -1508 910 1 605 260 85 0 chr2 11726924 11727170 -238960684 - L1ME LINE L1 -1513 4633 4367 304 295 0 13 chr2 11727622 11727700 -238960154 + MIR SINE MIR 52 128 -80 633 299 120 4 chr2 11727815 11728049 -238959805 - MIR SINE MIR 0 262 2 248 186 0 17 chr2 11728079 11728138 -238959716 + L1MCa LINE L1 2006 2063 -4363 212 189 0 0 chr2 11728187 11728224 -238959630 + (TA)n Simple_repeat Simple_repeat 1 37 0 235 291 149 30 chr2 11729853 11729987 -238957867 - MIR3 SINE MIR -17 191 42 1949 119 46 3 chr2 11729995 11730280 -238957574 + AluSx SINE Alu 1 297 -15 2897 6 0 0 chr2 11730464 11730775 -238957079 + AluYb8 SINE Alu 3 313 -5 761 185 1 10 chr2 11731094 11731240 -238956614 + MLT1C LTR MaLR 337 466 -1 261 346 6 27 chr2 11731450 11731622 -238956232 - MIR SINE MIR -64 198 35 383 328 143 51 chr2 11732097 11732260 -238955594 - L3 LINE CR1 -3 1574 1427 1909 128 35 0 chr2 11732260 11732542 -238955312 - AluSx SINE Alu -20 292 1 383 328 143 51 chr2 11732542 11732671 -238955183 - L3 LINE CR1 -150 1427 1255 189 107 0 0 chr2 11732731 11732759 -238955095 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 287 276 16 81 chr2 11732793 11732840 -238955014 - MIR SINE MIR 0 262 214 1835 205 65 75 chr2 11732840 11733396 -238954458 + MLT2B3 LTR ERVL 1 550 -4 287 276 16 81 chr2 11733396 11733471 -238954383 - MIR SINE MIR -48 214 148 232 305 65 52 chr2 11734605 11734870 -238952984 - L2 LINE L2 -92 3180 2860 1160 307 132 11 chr2 11735256 11735725 -238952129 - MLT1G LTR MaLR -55 535 10 1302 270 81 41 chr2 11736791 11737358 -238950496 - MLT1G LTR MaLR 0 590 1 474 291 174 34 chr2 11737373 11737844 -238950010 - L2 LINE L2 -901 2413 1877 21 89 0 0 chr2 11737859 11737915 -238949939 + AT_rich Low_complexity Low_complexity 1 56 0 220 292 21 62 chr2 11738143 11738239 -238949615 + L2 LINE L2 1038 1129 -2185 353 316 76 0 chr2 11738265 11738423 -238949431 + L2 LINE L2 1256 1425 -1889 416 260 79 0 chr2 11739349 11739476 -238948378 + L2 LINE L2 3169 3305 -8 3233 155 38 2 chr2 11740162 11740736 -238947118 + LTR49 LTR ERV1 1 595 0 24 32 0 0 chr2 11741062 11741093 -238946761 + AT_rich Low_complexity Low_complexity 1 31 0 379 149 68 27 chr2 11741427 11741501 -238946353 - LTR29 LTR ERV1 -115 503 404 343 150 0 0 chr2 11742458 11742518 -238945336 - L1PA16 LINE L1 -10 6156 6097 29 28 0 0 chr2 11743669 11743705 -238944149 + AT_rich Low_complexity Low_complexity 1 36 0 536 207 174 117 chr2 11743892 11744284 -238943570 - LTR50 LTR ERVL -324 471 58 195 129 0 0 chr2 11744429 11744460 -238943394 + (A)n Simple_repeat Simple_repeat 1 31 0 696 277 51 45 chr2 11744805 11745141 -238942713 - L1MC4 LINE L1 -571 7471 7134 1842 196 92 37 chr2 11745141 11745596 -238942258 + MLT2B1 LTR ERVL 1 480 -40 491 85 51 40 chr2 11745624 11745801 -238942053 + (TA)n Simple_repeat Simple_repeat 2 180 0 258 122 52 26 chr2 11745813 11745928 -238941926 + (TA)n Simple_repeat Simple_repeat 2 119 0 268 163 0 0 chr2 11745928 11745977 -238941877 + MLT2B1 LTR ERVL 464 512 -8 360 273 37 12 chr2 11745998 11746159 -238941695 - L1MC4 LINE L1 -937 7105 6941 671 299 85 16 chr2 11746803 11747357 -238940497 - L1MC4 LINE L1 -977 6831 6277 1333 187 93 22 chr2 11747503 11747771 -238940083 + AluJb SINE Alu 3 289 -23 215 226 151 54 chr2 11748079 11748172 -238939682 + MIR SINE MIR 96 197 -65 402 270 68 75 chr2 11750167 11750460 -238937394 - MLT1I LTR MaLR -22 387 97 1269 227 14 50 chr2 11750472 11750833 -238937021 + MLT2C1 LTR ERVL 50 397 0 24 32 0 0 chr2 11751000 11751031 -238936823 + AT_rich Low_complexity Low_complexity 1 31 0 252 288 0 25 chr2 11751090 11751170 -238936684 - L1ME3A LINE L1 -73 6097 6020 183 271 186 25 chr2 11751451 11751569 -238936285 - MIR SINE MIR -30 232 96 192 125 0 0 chr2 11752002 11752034 -238935820 + (TC)n Simple_repeat Simple_repeat 1 32 0 189 196 0 0 chr2 11752033 11752079 -238935775 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 348 246 15 41 chr2 11752153 11752348 -238935506 - L1MC5 LINE L1 -271 7690 7501 564 267 0 0 chr2 11752362 11752493 -238935361 - MER3 DNA MER1_type -78 131 1 2000 104 0 0 chr2 11752563 11752842 -238935012 + L1PA8 LINE L1 5887 6165 -7 1777 255 35 50 chr2 11752939 11753679 -238934175 - L1MC4 LINE L1 -544 7498 6770 182 119 34 34 chr2 11754193 11754252 -238933602 + (TA)n Simple_repeat Simple_repeat 1 59 0 312 108 50 42 chr2 11754267 11754387 -238933467 + (TA)n Simple_repeat Simple_repeat 1 121 0 2089 62 0 0 chr2 11754445 11754718 -238933136 + AluY SINE Alu 39 311 0 352 316 64 32 chr2 11754999 11755186 -238932668 - HsTC2 DNA Tc2 -1007 891 699 308 328 138 11 chr2 11755212 11755401 -238932453 - L1ME1 LINE L1 -5 6161 5949 259 229 0 0 chr2 11755415 11755476 -238932378 - L1ME1 LINE L1 -272 5894 5834 2760 83 11 8 chr2 11755760 11756134 -238931720 + THE1C LTR MaLR 1 375 0 314 241 9 36 chr2 11756192 11756304 -238931550 + L1ME4a LINE L1 5741 5849 -272 368 266 84 0 chr2 11756325 11756479 -238931375 + L1ME4a LINE L1 5944 6110 -11 3865 44 0 0 chr2 11756932 11757411 -238930443 + L1P LINE L1 4742 5220 -926 31 0 0 0 chr2 11757840 11757871 -238929983 + AT_rich Low_complexity Low_complexity 1 31 0 1074 275 121 20 chr2 11758703 11759201 -238928653 - MLT1H LTR MaLR 0 549 2 2345 51 7 0 chr2 11759315 11759609 -238928245 + L1PA6 LINE L1 5847 6142 -12 294 146 18 0 chr2 11759648 11759703 -238928151 + MSTA LTR MaLR 373 428 0 4004 238 11 31 chr2 11760025 11761276 -238926578 - L1 LINE L1 -2979 3167 1937 1230 102 20 11 chr2 11761438 11761647 -238926207 + MLT2A2 LTR ERVL 293 453 0 1226 248 58 31 chr2 11761649 11762026 -238925828 - L1ME LINE L1 -3362 2718 2322 1734 167 27 46 chr2 11762026 11762398 -238925456 - MLT1A1 LTR MaLR 0 365 1 1226 248 58 31 chr2 11762398 11762533 -238925321 - L1ME LINE L1 -3758 2322 2192 657 153 0 0 chr2 11762535 11762633 -238925221 - Tigger3(Golem) DNA MER2_type -2 3027 2930 * 2919 158 55 8 chr2 11762624 11763135 -238924719 - Tigger3b DNA MER2_type -696 535 1 1855 274 77 80 chr2 11763144 11764331 -238923523 - L1ME LINE L1 -4052 2209 970 231 36 0 0 chr2 11764331 11764359 -238923495 + (TC)n Simple_repeat Simple_repeat 2 29 0 1855 274 77 80 chr2 11764359 11765322 -238922532 - L1ME LINE L1 -5291 970 6 292 348 100 24 chr2 11765448 11765827 -238922027 - L2 LINE L2 -641 2673 2266 212 167 0 0 chr2 11767007 11767043 -238920811 + (TATG)n Simple_repeat Simple_repeat 2 37 0 558 281 30 90 chr2 11767048 11767315 -238920539 - MIR SINE MIR -10 252 2 24 0 0 0 chr2 11767494 11767518 -238920336 + AT_rich Low_complexity Low_complexity 1 24 0 594 299 48 24 chr2 11767718 11768196 -238919658 + MLT1H1 LTR MaLR 1 587 -8 494 187 29 14 chr2 11768274 11768413 -238919441 - MER69 DNA AcHobo -9 2517 2377 1346 225 126 6 chr2 11768672 11769006 -238918848 + MLT1A2 LTR MaLR 1 374 0 351 276 11 0 chr2 11769083 11769170 -238918684 + GA-rich Low_complexity Low_complexity 3 90 0 1421 216 35 37 chr2 11769404 11769779 -238918075 - MLT1A2 LTR MaLR 0 374 1 225 159 0 0 chr2 11770370 11770414 -238917440 + GA-rich Low_complexity Low_complexity 1 44 0 1309 241 108 50 chr2 11770420 11771206 -238916648 - L1MEc LINE L1 -3961 3161 2330 941 75 37 8 chr2 11771206 11771340 -238916514 + MSTB1 LTR MaLR 295 432 0 481 313 69 41 chr2 11771343 11771663 -238916191 - L1MEc LINE L1 -5335 1088 760 955 257 89 60 chr2 11771835 11772305 -238915549 - L1MEc LINE L1 -5923 500 17 387 141 0 0 chr2 11772365 11772429 -238915425 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 240 225 43 130 chr2 11772483 11772621 -238915233 - MIR SINE MIR -2 260 135 228 313 46 61 chr2 11772778 11772909 -238914945 - MIR SINE MIR -58 150 22 22 56 0 0 chr2 11773137 11773173 -238914681 + AT_rich Low_complexity Low_complexity 1 36 0 242 243 43 29 chr2 11773742 11773812 -238914042 + MIR SINE MIR 60 130 -78 195 42 0 0 chr2 11774077 11774101 -238913753 + (TTA)n Simple_repeat Simple_repeat 1 24 0 513 274 59 41 chr2 11775357 11775576 -238912278 - MIR SINE MIR -27 235 13 1270 194 43 25 chr2 11776486 11776810 -238911044 - L1ME LINE L1 -368 5796 5467 2030 134 64 19 chr2 11776913 11777272 -238910582 + THE1C LTR MaLR 1 375 0 9768 121 31 38 chr2 11777272 11778863 -238908991 + THE1C-int LTR MaLR 1 1580 0 2111 129 64 14 chr2 11778865 11779222 -238908632 + THE1C LTR MaLR 1 375 0 480 291 92 5 chr2 11779299 11779495 -238908359 + MIR SINE MIR 37 249 -13 243 308 0 22 chr2 11780047 11780138 -238907716 + CT-rich Low_complexity Low_complexity 2 90 0 240 35 0 0 chr2 11780144 11780173 -238907681 + (CA)n Simple_repeat Simple_repeat 2 30 0 252 0 0 0 chr2 11780474 11780502 -238907352 + (GA)n Simple_repeat Simple_repeat 1 28 0 293 231 71 108 chr2 11780523 11780671 -238907183 + MIR SINE MIR 31 170 -92 207 0 0 0 chr2 11780671 11780694 -238907160 + (TATG)n Simple_repeat Simple_repeat 2 24 0 293 231 71 108 chr2 11780694 11780757 -238907097 + MIR SINE MIR 170 234 -28 1372 185 59 72 chr2 11780789 11781178 -238906676 + MLT1B LTR MaLR 3 386 -4 1449 127 5 0 chr2 11781451 11781670 -238906184 - MSTA LTR MaLR -10 418 199 1988 157 65 35 chr2 11781670 11782185 -238905669 - MLT2A2 LTR ERVL 0 554 3 1093 128 96 5 chr2 11782186 11782373 -238905481 - MSTA LTR MaLR -224 204 1 196 311 76 30 chr2 11783015 11783147 -238904707 + MIR SINE MIR 119 256 -6 231 217 35 35 chr2 11783246 11783311 -238904543 + MIR SINE MIR 86 143 -65 22 80 0 0 chr2 11784081 11784131 -238903723 + AT_rich Low_complexity Low_complexity 1 50 0 334 323 60 23 chr2 11784289 11784506 -238903348 + MLT1H LTR MaLR 84 308 -241 1699 204 64 3 chr2 11784656 11785000 -238902854 + MLT1A1 LTR MaLR 1 365 0 2481 84 3 3 chr2 11785775 11786108 -238901746 - L1PA8A LINE L1 -4 6127 5795 36883 41 24 2 chr2 11786426 11791723 -238896131 - L1PA3 LINE L1 -226 5929 513 2933 20 9 0 chr2 11791823 11792223 -238895631 + L1PA2 LINE L1 5808 6210 0 854 90 0 0 chr2 11792246 11792368 -238895486 + L1PA7 LINE L1 5814 5935 -219 2404 80 0 3 chr2 11792405 11792704 -238895150 - AluY SINE Alu -13 298 1 438 314 128 19 chr2 11792725 11793103 -238894751 - L1M4 LINE L1 -2153 3993 3577 504 72 0 0 chr2 11793468 11793537 -238894317 + (TC)n Simple_repeat Simple_repeat 1 69 0 344 369 118 27 chr2 11794001 11794649 -238893205 - L1MEd LINE L1 -744 1746 948 27 0 0 0 chr2 11795799 11795826 -238892028 + AT_rich Low_complexity Low_complexity 1 27 0 1371 233 76 35 chr2 11796515 11797055 -238890799 + HsTC2a DNA Tc2 145 706 -38 181 257 27 54 chr2 11797122 11797196 -238890658 - L2 LINE L2 -4 3268 3197 21 0 0 0 chr2 11797931 11797952 -238889902 + AT_rich Low_complexity Low_complexity 1 21 0 348 24 0 0 chr2 11798200 11798241 -238889613 + (CA)n Simple_repeat Simple_repeat 2 42 0 3288 54 14 0 chr2 11798373 11798818 -238889036 - L1P LINE L1 -5691 455 5 1235 56 0 0 chr2 11798818 11798980 -238888874 - L1PA7 LINE L1 -324 5830 5669 1483 104 0 9 chr2 11798980 11799196 -238888658 + L1PA7 LINE L1 5932 6151 -3 985 181 84 13 chr2 11799299 11799602 -238888252 + MER33 DNA MER1_type 1 318 -6 347 335 101 18 chr2 11799611 11799889 -238887965 + L1MC/D LINE L1 4133 4433 -1713 28 79 0 0 chr2 11799961 11800024 -238887830 + AT_rich Low_complexity Low_complexity 1 63 0 22 35 0 0 chr2 11800413 11800442 -238887412 + AT_rich Low_complexity Low_complexity 1 29 0 338 318 22 45 chr2 11800448 11800938 -238886916 + L1MC/D LINE L1 5037 5514 -650 257 326 0 101 chr2 11800957 11801095 -238886759 - MER5B DNA MER1_type -49 129 6 509 336 79 40 chr2 11801335 11801846 -238886008 + L1 LINE L1 3838 4379 -1767 2147 116 7 10 chr2 11801846 11802147 -238885707 - AluSx SINE Alu -12 300 1 509 336 79 40 chr2 11802147 11802257 -238885597 + L1 LINE L1 4379 4483 -1663 274 235 70 20 chr2 11803551 11803652 -238884202 + MIR SINE MIR 95 200 -58 806 292 132 37 chr2 11804012 11804467 -238883387 - L3 LINE CR1 -1 1576 1079 23 33 0 0 chr2 11805969 11805999 -238881855 + AT_rich Low_complexity Low_complexity 1 30 0 769 307 40 33 chr2 11806906 11807235 -238880619 - MLT1J2 LTR MaLR -118 332 2 56 16 0 0 chr2 11809717 11809780 -238878074 + AT_rich Low_complexity Low_complexity 1 63 0 377 317 8 16 chr2 11809828 11809951 -238877903 - MIR SINE MIR -66 142 21 476 204 186 66 chr2 11810019 11810186 -238877668 - MER5A DNA MER1_type -1 188 2 242 317 30 10 chr2 11811575 11811676 -238876178 - MIR SINE MIR -102 160 58 2362 108 0 0 chr2 11812082 11812388 -238875466 + AluSx SINE Alu 1 306 -6 186 400 50 0 chr2 11812685 11812805 -238875049 - MIR SINE MIR -90 172 47 252 0 0 0 chr2 11814186 11814214 -238873640 + (CA)n Simple_repeat Simple_repeat 1 28 0 295 323 173 27 chr2 11814296 11814556 -238873298 - L2 LINE L2 -42 3230 2933 433 147 0 13 chr2 11815384 11815459 -238872395 + L1M2 LINE L1 5691 5764 -548 21 36 0 0 chr2 11815612 11815640 -238872214 + AT_rich Low_complexity Low_complexity 1 28 0 320 339 95 23 chr2 11816044 11816265 -238871589 + MIR SINE MIR 5 241 -21 352 284 39 0 chr2 11818005 11818107 -238869747 + MIR SINE MIR 47 152 -110 334 141 125 0 chr2 11819383 11819447 -238868407 + LTR33A LTR ERVL 448 519 -4 323 229 8 38 chr2 11819569 11819700 -238868154 + (TA)n Simple_repeat Simple_repeat 1 127 0 292 302 117 45 chr2 11819746 11819968 -238867886 - L2 LINE L2 -452 2862 2625 2456 258 66 6 chr2 11820508 11821201 -238866653 + MER69 DNA AcHobo 1 735 -1791 1032 241 114 5 chr2 11821213 11821590 -238866264 + MER69 DNA AcHobo 1840 2257 -269 239 254 63 0 chr2 11821816 11821879 -238865975 - MIR SINE MIR 0 262 196 275 308 25 42 chr2 11822093 11822213 -238865641 + MIR SINE MIR 8 125 -137 271 368 85 46 chr2 11822518 11822847 -238865007 + L2 LINE L2 2832 3173 -99 2621 40 0 0 chr2 11822847 11823150 -238864704 - AluY SINE Alu -8 303 1 8722 107 11 1 chr2 11823404 11824672 -238863182 - HSMAR1 DNA Mariner -1 1286 6 698 257 103 24 chr2 11824820 11825073 -238862781 - MLT1B LTR MaLR -15 375 103 615 246 7 0 chr2 11825077 11825219 -238862635 + L1PB4 LINE L1 6013 6155 -1 508 129 119 30 chr2 11825228 11825329 -238862525 - MLT1B LTR MaLR -280 110 1 366 331 147 11 chr2 11826791 11826975 -238860879 + MIR SINE MIR 23 231 -31 365 356 47 5 chr2 11827302 11827493 -238860361 + MIR SINE MIR 32 230 -32 235 314 164 21 chr2 11827811 11827951 -238859903 + MIR SINE MIR 29 188 -74 3887 97 15 2 chr2 11828391 11828938 -238858916 - MER41A LTR ERV1 0 554 1 201 175 0 0 chr2 11829194 11829234 -238858620 + CT-rich Low_complexity Low_complexity 2 41 0 228 240 0 40 chr2 11829542 11829617 -238858237 + MLT1G LTR MaLR 517 588 -2 241 243 14 14 chr2 11829624 11829694 -238858160 + MLT1G-int LTR MaLR 6 75 -1296 471 335 23 16 chr2 11829762 11830066 -238857788 + MLT1G-int LTR MaLR 270 575 -796 1383 214 4 71 chr2 11830672 11831027 -238856827 - L1 LINE L1 -758 5388 5072 2165 137 3 0 chr2 11831027 11831334 -238856520 - AluSx SINE Alu -4 308 1 1383 214 4 71 chr2 11831334 11831455 -238856399 - L1 LINE L1 -1074 5072 4944 663 214 46 31 chr2 11831636 11831832 -238856022 - L1 LINE L1 -1218 4928 4730 4084 177 39 32 chr2 11831848 11832764 -238855090 + L1MA10 LINE L1 5411 6333 -1 245 280 75 11 chr2 11833204 11833297 -238854557 + MLT1F LTR MaLR 52 150 -445 440 215 97 48 chr2 11833393 11833618 -238854236 + MLT1F LTR MaLR 331 590 0 180 0 0 0 chr2 11834426 11834446 -238853408 + (A)n Simple_repeat Simple_repeat 1 20 0 182 114 0 29 chr2 11834971 11835006 -238852848 + (GGAGAA)n Simple_repeat Simple_repeat 4 37 0 24 32 0 0 chr2 11835153 11835184 -238852670 + AT_rich Low_complexity Low_complexity 1 31 0 372 340 71 20 chr2 11835596 11835793 -238852061 + MIR SINE MIR 56 262 0 565 266 73 48 chr2 11835827 11836226 -238851628 + HAL1b LINE L1 374 782 -566 250 247 23 6 chr2 11837610 11837784 -238850070 + (TA)n Simple_repeat Simple_repeat 1 177 0 237 208 56 0 chr2 11838264 11838336 -238849518 + L1ME LINE L1 512 587 -5483 2485 201 32 10 chr2 11838527 11839118 -238848736 + L1MB7 LINE L1 5576 6179 -5 361 295 69 107 chr2 11839121 11839338 -238848516 + L1ME3A LINE L1 4601 4825 -1321 1994 97 7 29 chr2 11839338 11839616 -238848238 + AluY SINE Alu 27 298 -13 361 295 69 107 chr2 11839616 11840063 -238847791 + L1ME3A LINE L1 4825 5240 -906 426 261 81 6 chr2 11840331 11840492 -238847362 - L1M4 LINE L1 -2830 3316 3144 1774 89 0 8 chr2 11840492 11840727 -238847127 - AluY SINE Alu 0 311 79 2424 108 68 21 chr2 11840727 11841154 -238846700 + LTR7 LTR ERV1 1 447 -3 19055 93 6 29 chr2 11841157 11844223 -238843631 + HERVH LTR ERV1 1 2995 -4718 827 136 27 0 chr2 11844202 11844349 -238843505 + HERVH LTR ERV1 3140 3290 -4423 * 3220 112 4 2 chr2 11844339 11844840 -238843014 + HERVH LTR ERV1 3492 3993 -3720 3527 135 71 22 chr2 11844842 11845473 -238842381 + HERVH LTR ERV1 4488 5149 -2564 1288 115 53 0 chr2 11845474 11845683 -238842171 + HERVH LTR ERV1 5600 5819 -1894 2238 94 51 3 chr2 11845683 11846055 -238841799 + HERVH LTR ERV1 7324 7713 0 2528 104 60 21 chr2 11846055 11846486 -238841368 + LTR7 LTR ERV1 1 448 -2 573 145 0 0 chr2 11846488 11846571 -238841283 - AluY SINE Alu -227 83 1 1069 281 45 70 chr2 11846651 11846941 -238840913 + L1ME3A LINE L1 5294 5590 -580 2149 106 0 0 chr2 11846941 11847245 -238840609 + AluSc SINE Alu 1 304 0 1069 281 45 70 chr2 11847245 11847843 -238840011 + L1ME3A LINE L1 5590 6157 -13 208 323 0 0 chr2 11849469 11849531 -238838323 + MIR SINE MIR 83 144 -64 183 286 39 26 chr2 11850527 11850604 -238837250 - L2 LINE L2 0 3272 3195 217 192 20 25 chr2 11850633 11850838 -238837016 + (TA)n Simple_repeat Simple_repeat 1 203 0 884 233 147 8 chr2 11850841 11851152 -238836702 - MLT2B1 LTR ERVL -21 533 137 187 398 19 19 chr2 11851566 11851674 -238836180 + MIR SINE MIR 36 143 -65 24 0 0 0 chr2 11851726 11851750 -238836104 + AT_rich Low_complexity Low_complexity 1 24 0 6665 67 10 1 chr2 11851906 11852915 -238834939 + L1PA7 LINE L1 5025 6150 -4 328 332 133 5 chr2 11853153 11853341 -238834513 - MIR SINE MIR -10 252 42 1923 201 15 20 chr2 11853593 11853991 -238833863 - MSTD LTR MaLR 0 396 1 299 263 0 19 chr2 11854305 11854475 -238833379 + L1MDb LINE L1 1413 1617 -5071 6151 92 20 1 chr2 11854518 11855822 -238832032 + L1PA10 LINE L1 4834 6151 -17 289 307 57 12 chr2 11855822 11856043 -238831811 + L1MDb LINE L1 1449 1673 -4869 210 379 61 0 chr2 11857713 11857779 -238830075 + L2 LINE L2 3111 3180 -92 205 250 7 157 chr2 11858418 11858558 -238829296 + L2 LINE L2 3138 3256 -16 937 291 14 36 chr2 11858899 11859257 -238828597 + MLT1J2 LTR MaLR 25 374 -76 181 362 53 0 chr2 11859843 11859937 -238827917 + L3 LINE CR1 1425 1523 -54 415 314 59 18 chr2 11860072 11860292 -238827562 + MIR SINE MIR 2 230 -32 869 211 6 0 chr2 11860512 11860668 -238827186 + FAM SINE Alu 1 157 -18 361 323 51 0 chr2 11860871 11861029 -238826825 - MIR SINE MIR -4 258 93 249 288 0 72 chr2 11861789 11861900 -238825954 + MIR SINE MIR 37 139 -69 199 325 125 42 chr2 11862492 11862612 -238825242 + MIR3 SINE MIR 1 130 -78 296 154 0 0 chr2 11862792 11862844 -238825010 - L1MB8 LINE L1 -10 6168 6117 2017 134 0 25 chr2 11864307 11864627 -238823227 + AluSx SINE Alu 1 312 0 405 209 12 12 chr2 11865470 11865556 -238822298 - MER81 DNA DNA 0 114 29 666 329 133 22 chr2 11865566 11866055 -238821799 + L2 LINE L2 2211 2753 -561 276 149 0 0 chr2 11866474 11866521 -238821333 + (TC)n Simple_repeat Simple_repeat 2 48 0 380 288 84 20 chr2 11866661 11867053 -238820801 - L1MC4 LINE L1 0 8042 7506 2826 74 33 3 chr2 11867306 11867697 -238820157 + MLT2A1 LTR ERVL 1 403 -41 319 154 39 10 chr2 11867714 11867818 -238820036 + (TA)n Simple_repeat Simple_repeat 1 107 0 23 0 0 0 chr2 11867818 11867841 -238820013 + AT_rich Low_complexity Low_complexity 1 23 0 279 116 0 0 chr2 11867861 11867904 -238819950 + MLT2A1 LTR ERVL 402 444 0 481 281 14 22 chr2 11868103 11868242 -238819612 + L2 LINE L2 3168 3305 -8 294 29 0 0 chr2 11869381 11869416 -238818438 + (TC)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 11869535 11869556 -238818298 + AT_rich Low_complexity Low_complexity 1 21 0 201 184 36 25 chr2 11869588 11869878 -238817976 + (TA)n Simple_repeat Simple_repeat 1 293 0 210 205 68 8 chr2 11869924 11870041 -238817813 + (TA)n Simple_repeat Simple_repeat 2 125 0 187 154 19 19 chr2 11870088 11870140 -238817714 + (TA)n Simple_repeat Simple_repeat 2 53 0 1128 239 112 29 chr2 11870193 11870540 -238817314 - MLT2B1 LTR ERVL -137 383 8 184 375 0 0 chr2 11871005 11871069 -238816785 + MIR SINE MIR 78 141 -67 3410 8 0 0 chr2 11871741 11872126 -238815728 - L1PA2 LINE L1 0 6155 5771 4272 20 0 0 chr2 11872126 11872766 -238815088 + L1PA2 LINE L1 5134 5773 -382 1365 212 39 69 chr2 11873186 11873677 -238814177 - L1MA10 LINE L1 -3 6331 5856 395 227 35 93 chr2 11874005 11874131 -238813723 + MER96B DNA MER1_type? 1 116 -301 1812 132 62 14 chr2 11874131 11874419 -238813435 + AluSx SINE Alu 1 302 -10 395 227 35 93 chr2 11874419 11874464 -238813390 + MER96B DNA MER1_type? 116 162 -255 199 330 68 48 chr2 11874929 11875032 -238812822 - L2 LINE L2 -14 3258 3154 206 323 86 21 chr2 11876070 11876163 -238811691 - L2 LINE L2 -32 3240 3142 261 119 0 0 chr2 11877302 11877344 -238810510 + (TTCC)n Simple_repeat Simple_repeat 4 45 0 1925 128 18 4 chr2 11877353 11877634 -238810220 + AluSx SINE Alu 27 311 -1 259 294 87 22 chr2 11877767 11877859 -238809995 - L2 LINE L2 -188 3084 2987 280 298 170 18 chr2 11878517 11878688 -238809166 - MIR SINE MIR 0 262 66 245 334 114 64 chr2 11879346 11879705 -238808149 + L2 LINE L2 2887 3263 -9 288 0 0 0 chr2 11880070 11880102 -238807752 + (TG)n Simple_repeat Simple_repeat 2 33 0 2070 210 56 94 chr2 11880504 11881215 -238806639 + Charlie1a DNA MER1_type 1 684 -771 615 134 4 195 chr2 11881235 11881432 -238806422 - Charlie1 DNA MER1_type -375 2386 2238 1953 112 0 94 chr2 11881432 11881763 -238806091 - AluSx SINE Alu -12 300 1 615 134 4 195 chr2 11881763 11881796 -238806058 - Charlie1 DNA MER1_type -523 2238 2200 1350 202 30 16 chr2 11881796 11882168 -238805686 + Charlie1 DNA MER1_type 2385 2761 0 484 312 50 45 chr2 11882498 11882700 -238805154 + MIR3 SINE MIR 1 203 -5 376 325 234 0 chr2 11882805 11883002 -238804852 + MIR SINE MIR 10 252 -10 504 333 73 0 chr2 11883019 11883169 -238804685 + L2 LINE L2 3112 3272 0 217 273 76 0 chr2 11883788 11883854 -238804000 - MIR SINE MIR -87 175 105 470 282 20 20 chr2 11884211 11884360 -238803494 - L2 LINE L2 0 3313 3165 21 0 0 0 chr2 11884690 11884711 -238803143 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 11884890 11884914 -238802940 + AT_rich Low_complexity Low_complexity 1 24 0 400 326 61 11 chr2 11885049 11885230 -238802624 - L1ME4a LINE L1 -195 5926 5737 22 56 0 0 chr2 11885276 11885312 -238802542 + AT_rich Low_complexity Low_complexity 1 36 0 261 0 0 0 chr2 11885411 11885440 -238802414 + (A)n Simple_repeat Simple_repeat 1 29 0 365 298 132 29 chr2 11885852 11886057 -238801797 - MIR SINE MIR 0 262 37 475 330 30 51 chr2 11886376 11886612 -238801242 + MIR SINE MIR 5 235 -27 32 57 0 0 chr2 11887611 11887664 -238800190 + AT_rich Low_complexity Low_complexity 1 53 0 868 244 113 41 chr2 11888041 11888158 -238799696 + L1ME1 LINE L1 2201 2308 -3838 2145 123 27 0 chr2 11888158 11888458 -238799396 + AluSg SINE Alu 1 308 -2 868 244 113 41 chr2 11888458 11888781 -238799073 + L1ME1 LINE L1 2308 2692 -3454 1493 116 0 22 chr2 11888781 11889006 -238798848 - AluSg/x SINE Alu -8 304 85 868 244 113 41 chr2 11889006 11889122 -238798732 + L1ME1 LINE L1 2692 2798 -3348 1711 173 15 64 chr2 11889122 11889527 -238798327 - MLT1B LTR MaLR 0 390 6 2815 275 76 52 chr2 11889538 11889746 -238798108 + L1ME1 LINE L1 2801 3002 -3144 2817 13 0 0 chr2 11889746 11890057 -238797797 + AluY SINE Alu 1 311 0 2815 275 76 52 chr2 11890057 11892046 -238795808 + L1ME1 LINE L1 3002 5081 -1065 2770 102 0 0 chr2 11892046 11892410 -238795444 + THE1B LTR MaLR 1 364 0 2815 275 76 52 chr2 11892410 11892641 -238795213 + L1ME1 LINE L1 5081 5305 -841 1940 148 3 25 chr2 11892643 11892961 -238794893 + AluJb SINE Alu 1 311 -1 1075 261 106 9 chr2 11893017 11893165 -238794689 + L1ME1 LINE L1 5323 5455 -904 261 0 0 0 chr2 11893165 11893194 -238794660 + (CA)n Simple_repeat Simple_repeat 2 30 0 1075 261 106 9 chr2 11893194 11893470 -238794384 + L1ME1 LINE L1 5455 5788 -571 1118 236 60 3 chr2 11893470 11893771 -238794083 - MLT1D LTR MaLR -187 318 1 999 241 14 81 chr2 11893772 11893930 -238793924 + L1ME1 LINE L1 5782 5904 -262 2128 131 10 0 chr2 11893930 11894228 -238793626 - AluSp SINE Alu -12 301 1 999 241 14 81 chr2 11894228 11894426 -238793428 + L1ME1 LINE L1 5904 6114 -52 205 171 0 53 chr2 11894520 11894596 -238793258 + (TCTA)n Simple_repeat Simple_repeat 4 75 0 741 128 13 20 chr2 11894618 11894767 -238793087 + (TCTA)n Simple_repeat Simple_repeat 3 150 0 234 358 57 0 chr2 11895438 11895561 -238792293 - MIR SINE MIR -21 241 112 191 313 72 0 chr2 11895575 11895658 -238792196 + MIR SINE MIR 99 187 -75 2358 130 22 0 chr2 11895687 11896042 -238791812 - THE1B LTR MaLR 0 364 2 1534 179 58 0 chr2 11896633 11896924 -238790930 + AluJo SINE Alu 1 308 -4 448 196 11 0 chr2 11897068 11897160 -238790694 - FLAM_C SINE Alu -3 140 48 693 73 0 0 chr2 11897214 11897310 -238790544 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 1663 160 0 60 chr2 11897320 11897638 -238790216 + AluJo SINE Alu 14 312 0 190 54 27 27 chr2 11897638 11897675 -238790179 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 573 199 18 6 chr2 11897699 11897865 -238789989 + GA-rich Low_complexity Low_complexity 2 169 0 2337 50 0 3 chr2 11897897 11898215 -238789639 + AluY SINE Alu 1 317 0 384 152 0 0 chr2 11898559 11898625 -238789229 + (TG)n Simple_repeat Simple_repeat 2 67 0 1298 213 21 15 chr2 11898680 11899009 -238788845 + L1MD3 LINE L1 7665 7995 0 251 272 87 10 chr2 11899161 11899264 -238788590 - L1ME LINE L1 -485 6134 6024 291 298 29 39 chr2 11899775 11899879 -238787975 + MIR SINE MIR 40 142 -120 1504 284 154 34 chr2 11900225 11901095 -238786759 - L1M4c LINE L1 -2735 3909 2847 1588 156 107 26 chr2 11901095 11901271 -238786583 + THE1C LTR MaLR 1 161 -214 531 56 0 0 chr2 11901271 11901342 -238786512 + (TC)n Simple_repeat Simple_repeat 1 71 0 1588 156 107 26 chr2 11901342 11901512 -238786342 + THE1C LTR MaLR 161 375 0 1504 284 154 34 chr2 11901512 11901864 -238785990 - L1M4c LINE L1 -3797 2847 2539 326 274 75 0 chr2 11901882 11901988 -238785866 - L1M4c LINE L1 -4163 2483 2370 2988 240 73 28 chr2 11902006 11902131 -238785723 - L1M4c LINE L1 -4432 2393 2275 2434 65 0 16 chr2 11902131 11902441 -238785413 + AluY SINE Alu 1 305 -6 2988 240 73 28 chr2 11902441 11903798 -238784056 - L1M4c LINE L1 -4550 2275 684 1097 246 41 52 chr2 11903799 11904161 -238783693 - L1M4c LINE L1 -5937 605 248 1267 230 4 25 chr2 11904169 11904447 -238783407 - AluJb SINE Alu -7 305 34 4940 206 29 39 chr2 11904454 11905492 -238782362 + L1MC3 LINE L1 5716 6763 -1022 2267 93 0 10 chr2 11905492 11905794 -238782060 - AluSc SINE Alu -10 299 1 4940 206 29 39 chr2 11905794 11905922 -238781932 + L1MC3 LINE L1 6763 6891 -894 351 0 0 0 chr2 11905922 11905961 -238781893 + (CA)n Simple_repeat Simple_repeat 2 40 0 4940 206 29 39 chr2 11905961 11906160 -238781694 + L1MC3 LINE L1 6891 7068 -717 238 315 140 0 chr2 11907543 11907686 -238780168 - MIR SINE MIR -6 256 94 639 7 107 0 chr2 11908399 11908539 -238779315 + (TA)n Simple_repeat Simple_repeat 1 155 0 196 100 20 20 chr2 11908541 11908591 -238779263 + (TATAA)n Simple_repeat Simple_repeat 5 54 0 330 227 0 52 chr2 11908591 11908688 -238779166 + L1MC4 LINE L1 6612 6703 -1339 273 348 61 35 chr2 11908879 11909109 -238778745 - MIR SINE MIR -6 256 21 2284 77 3 29 chr2 11909868 11910179 -238777675 + AluY SINE Alu 9 311 0 1236 211 44 73 chr2 11910242 11910655 -238777199 - MLT2D LTR ERVL -13 401 1 210 71 0 0 chr2 11911300 11911328 -238776526 + (A)n Simple_repeat Simple_repeat 1 28 0 387 0 0 0 chr2 11911653 11911696 -238776158 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 270 0 0 0 chr2 11911971 11912001 -238775853 + (A)n Simple_repeat Simple_repeat 1 30 0 43 35 0 0 chr2 11913273 11913330 -238774524 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr2 11913384 11913405 -238774449 + AT_rich Low_complexity Low_complexity 1 21 0 211 244 0 39 chr2 11913417 11913495 -238774359 + (CATATA)n Simple_repeat Simple_repeat 5 79 0 244 374 30 0 chr2 11913599 11913698 -238774156 - L2 LINE L2 0 3272 3171 23 0 0 0 chr2 11914956 11914979 -238772875 + AT_rich Low_complexity Low_complexity 1 23 0 321 304 0 43 chr2 11915015 11915130 -238772724 - L2 LINE L2 -32 3281 3172 206 308 13 26 chr2 11915354 11915432 -238772422 - MER91A DNA MER1_type -111 85 9 302 376 38 11 chr2 11915513 11915699 -238772155 - L2 LINE L2 -281 3032 2842 182 325 38 0 chr2 11915902 11915982 -238771872 - MIR3 SINE MIR 0 208 126 218 284 0 26 chr2 11915990 11916106 -238771748 + (TA)n Simple_repeat Simple_repeat 2 114 0 3737 92 28 9 chr2 11916400 11916973 -238770881 - L1PB1 LINE L1 -158 5993 5410 910 140 0 0 chr2 11916975 11917125 -238770729 + L1PB1 LINE L1 6002 6151 0 1217 153 101 37 chr2 11917137 11917436 -238770418 - MLT1A1 LTR MaLR -39 357 9 2361 71 0 14 chr2 11917923 11918220 -238769634 - AluY SINE Alu -18 293 1 417 316 130 32 chr2 11918820 11919289 -238768565 + L1M3b LINE L1 629 1143 -5138 25 0 0 0 chr2 11919410 11919435 -238768419 + AT_rich Low_complexity Low_complexity 1 25 0 26 50 0 0 chr2 11919764 11919804 -238768050 + AT_rich Low_complexity Low_complexity 1 40 0 2075 112 14 17 chr2 11921194 11921488 -238766366 - AluSx SINE Alu -19 293 1 183 281 195 0 chr2 11921513 11921595 -238766259 - L2 LINE L2 -36 3277 3180 336 267 92 112 chr2 11921889 11922095 -238765759 - MLT1I LTR MaLR -1 408 207 1338 202 7 109 chr2 11922358 11922769 -238765085 - MLT1A2 LTR MaLR 0 374 6 339 372 39 13 chr2 11925150 11925381 -238762473 + MIR SINE MIR 9 245 -17 292 333 35 26 chr2 11926025 11926139 -238761715 - MIR SINE MIR -147 115 1 209 409 0 11 chr2 11926332 11926425 -238761429 + MER5A DNA MER1_type 74 165 -24 330 290 0 11 chr2 11926647 11926740 -238761114 - L1MC4 LINE L1 -1337 6705 6614 216 0 0 0 chr2 11926742 11926766 -238761088 + (GA)n Simple_repeat Simple_repeat 2 25 0 253 294 80 74 chr2 11926892 11927218 -238760636 - L1MC4 LINE L1 -1906 5902 5575 327 49 0 0 chr2 11927420 11927461 -238760393 + (CA)n Simple_repeat Simple_repeat 2 42 0 260 331 22 29 chr2 11927462 11927601 -238760253 + (CATG)n Simple_repeat Simple_repeat 2 139 0 23 33 0 0 chr2 11927632 11927662 -238760192 + AT_rich Low_complexity Low_complexity 1 30 0 870 305 29 34 chr2 11927843 11928194 -238759660 + L1MC4a LINE L1 5592 5940 -1868 221 202 22 22 chr2 11928232 11928321 -238759533 + (TA)n Simple_repeat Simple_repeat 1 89 0 233 302 0 0 chr2 11929170 11929233 -238758621 + T-rich Low_complexity Low_complexity 3 65 0 309 233 33 67 chr2 11930636 11930756 -238757098 + L1ME4a LINE L1 5937 6052 -69 255 301 15 30 chr2 11931708 11931841 -238756013 + L1ME4a LINE L1 5310 5440 -681 566 282 173 27 chr2 11931957 11932443 -238755411 + L1ME4a LINE L1 5546 6102 -19 1698 174 10 13 chr2 11932444 11932754 -238755100 + AluJo SINE Alu 3 311 -1 386 284 43 26 chr2 11932946 11933062 -238754792 - MIR3 SINE MIR -86 122 5 2328 63 6 44 chr2 11933247 11933563 -238754291 + AluY SINE Alu 1 304 -7 519 236 10 28 chr2 11934024 11934313 -238753541 + CT-rich Low_complexity Low_complexity 1 283 0 222 323 32 43 chr2 11934395 11934488 -238753366 + MIR SINE MIR 21 112 -150 192 277 0 62 chr2 11934492 11934557 -238753297 - L2 LINE L2 0 3272 3212 1068 252 91 31 chr2 11934820 11935173 -238752681 + HsTC2 DNA Tc2 1 374 -1524 588 210 93 25 chr2 11935170 11935332 -238752522 + HsTC2 DNA Tc2 1277 1625 -273 * 236 323 177 0 chr2 11935382 11935512 -238752342 + MIR SINE MIR 37 189 -73 366 335 61 12 chr2 11936497 11936661 -238751193 + MIR SINE MIR 35 206 -56 211 329 51 29 chr2 11936809 11936946 -238750908 + MIR3 SINE MIR 3 142 -66 486 0 0 0 chr2 11938640 11938694 -238749160 + (CA)n Simple_repeat Simple_repeat 2 55 0 26 0 0 0 chr2 11938877 11938903 -238748951 + AT_rich Low_complexity Low_complexity 1 26 0 204 340 38 28 chr2 11939337 11939443 -238748411 + MIR SINE MIR 66 172 -90 3096 151 2 11 chr2 11940029 11940500 -238747354 + MLT1C LTR MaLR 1 467 0 4628 171 53 10 chr2 11940699 11941491 -238746363 - LTR1B LTR ERV1 0 826 1 551 273 40 42 chr2 11941756 11942031 -238745823 + L2 LINE L2 2956 3291 -22 3552 39 0 2 chr2 11942042 11942448 -238745406 + L1PA4 LINE L1 5746 6150 -5 2399 90 3 0 chr2 11942823 11943133 -238744721 + AluSp SINE Alu 1 311 -2 988 212 0 10 chr2 11943159 11943352 -238744502 - MER3 DNA MER1_type 0 209 19 341 254 60 103 chr2 11943952 11944137 -238743717 - MLT1J1 LTR MaLR -28 418 242 230 253 177 0 chr2 11944184 11944263 -238743591 - MLT1J1 LTR MaLR -285 161 69 1489 204 20 67 chr2 11944923 11945281 -238742573 - MER58B DNA MER1_type 0 341 1 342 278 61 37 chr2 11945864 11946069 -238741785 - HAL1b LINE L1 0 6121 5922 1831 117 3 60 chr2 11946069 11946369 -238741485 - AluSq SINE Alu -19 294 12 342 278 61 37 chr2 11946369 11946507 -238741347 - HAL1b LINE L1 -199 5922 1242 332 308 87 0 chr2 11946545 11946649 -238741205 - L2 LINE L2 -5 3308 3196 265 349 54 8 chr2 11946651 11946780 -238741074 - L2 LINE L2 -25 3247 3113 186 348 58 0 chr2 11947528 11947597 -238740257 - L3 LINE CR1 -677 900 828 269 214 0 0 chr2 11948685 11948741 -238739113 - MLT2B2 LTR ERVL 0 520 465 271 263 0 42 chr2 11948749 11948844 -238739010 + L1MC4 LINE L1 6614 6704 -1338 1698 195 20 26 chr2 11948862 11949294 -238738560 - MLT2B2 LTR ERVL -40 480 8 579 279 62 0 chr2 11949344 11949505 -238738349 - MIR SINE MIR -15 247 77 652 221 99 9 chr2 11949505 11949783 -238738071 + LTR50 LTR ERVL 1 344 -451 888 224 100 17 chr2 11949814 11950104 -238737750 + LTR50 LTR ERVL 482 795 0 929 203 0 0 chr2 11950246 11950404 -238737450 - AluJb SINE Alu -23 289 132 705 276 24 0 chr2 11950715 11950885 -238736969 - MIR3 SINE MIR -4 204 31 730 212 6 17 chr2 11951121 11951300 -238736554 - MER96B DNA MER1_type? -238 179 3 225 333 27 13 chr2 11951521 11951596 -238736258 + MIR SINE MIR 13 88 -174 207 237 175 21 chr2 11951707 11951804 -238736050 + MIR SINE MIR 110 221 -41 1709 176 17 10 chr2 11952219 11952521 -238735333 + AluJo SINE Alu 1 304 -8 1554 276 78 26 chr2 11952605 11953165 -238734689 + MLT1E LTR MaLR 1 591 -2 791 106 29 0 chr2 11953169 11953273 -238734581 + U6 snRNA snRNA 1 107 0 3370 80 17 4 chr2 11953273 11953758 -238734096 + L1PA8A LINE L1 5227 5716 -415 756 113 0 0 chr2 11953865 11953980 -238733874 - L1PA7 LINE L1 -108 6046 5932 * 1324 56 0 0 chr2 11953974 11954136 -238733718 + L1PA7 LINE L1 5669 5830 -324 27814 39 38 3 chr2 11954136 11957559 -238730295 + L1P LINE L1 5 3549 -2597 1965 262 74 48 chr2 11957679 11958385 -238729469 + HERV16 LTR ERVL 733 1456 -3540 1635 303 43 28 chr2 11958565 11959235 -238728619 + HERV16 LTR ERVL 2220 2899 -2097 610 291 106 0 chr2 11959241 11959440 -238728414 - MLT1D LTR MaLR 0 505 286 814 274 21 60 chr2 11959454 11959885 -238727969 + HERV16 LTR ERVL 3011 3468 -2296 1225 318 84 13 chr2 11961015 11961707 -238726147 + HAL1 LINE L1 1523 2263 -244 1569 228 21 12 chr2 11963871 11964204 -238723650 + MER58B DNA MER1_type 5 340 -1 622 239 61 0 chr2 11964234 11964414 -238723440 - L1MC4a LINE L1 -1498 6310 6120 1506 105 5 0 chr2 11964415 11964634 -238723220 - MER6 DNA MER2_type -27 838 619 1353 230 129 24 chr2 11964723 11965249 -238722605 - MLT1E1 LTR MaLR 0 654 1 2004 268 37 16 chr2 11965435 11965943 -238721911 + LTR40a LTR ERVL 1 519 0 2777 191 25 36 chr2 11966118 11966668 -238721186 + MER44D DNA MER2_type 7 605 0 234 0 0 0 chr2 11967379 11967405 -238720449 + (TG)n Simple_repeat Simple_repeat 1 26 0 211 366 32 0 chr2 11967622 11967715 -238720139 + MIR3 SINE MIR 105 200 -8 2659 120 8 5 chr2 11969612 11969986 -238717868 - THE1C LTR MaLR 0 375 1 562 299 51 0 chr2 11970264 11970401 -238717453 - MER45A DNA AcHobo -1 177 34 216 294 35 24 chr2 11971332 11971417 -238716437 - MIR SINE MIR -97 165 80 319 294 31 69 chr2 11973138 11973298 -238714556 - MIR SINE MIR -96 166 13 515 239 28 57 chr2 11973744 11973920 -238713934 - MER5B DNA MER1_type -2 176 6 203 62 62 0 chr2 11975790 11975822 -238712032 - MIR SINE MIR -105 157 124 2171 125 0 0 chr2 11975979 11976274 -238711580 + AluSg SINE Alu 1 295 -15 2143 170 10 47 chr2 11976537 11976942 -238710912 + MLT1B LTR MaLR 1 390 0 243 214 205 68 chr2 11977254 11977343 -238710511 + MIR SINE MIR 124 234 -28 8435 142 15 10 chr2 11977343 11978636 -238709218 + HSMAR2 DNA Mariner 3 1301 -1 243 214 205 68 chr2 11978636 11978663 -238709191 + MIR SINE MIR 234 256 -6 1953 177 106 32 chr2 11978736 11978928 -238708926 - MLT1C LTR MaLR 0 467 291 2486 176 54 77 chr2 11978928 11979554 -238708300 + LTR9 LTR ERV1 1 612 0 1953 177 106 32 chr2 11979554 11979796 -238708058 - MLT1C LTR MaLR -176 291 1 650 230 20 20 chr2 11979970 11980122 -238707732 + MER5B DNA MER1_type 27 178 0 185 159 23 0 chr2 11980680 11980724 -238707130 + CT-rich Low_complexity Low_complexity 1 45 0 413 293 47 60 chr2 11980968 11981118 -238706736 - MIR3 SINE MIR -41 167 20 366 214 88 159 chr2 11981485 11981667 -238706187 - MER5B DNA MER1_type 0 178 21 218 339 123 12 chr2 11981750 11982001 -238705853 - L2 LINE L2 -792 2522 2244 262 375 69 7 chr2 11983193 11983337 -238704517 + MIR SINE MIR 38 190 -72 22 56 0 0 chr2 11984559 11984595 -238703259 + AT_rich Low_complexity Low_complexity 1 36 0 217 321 47 38 chr2 11984701 11984807 -238703047 + MIR SINE MIR 25 131 -77 310 305 83 49 chr2 11984911 11985236 -238702618 + MARNA DNA Mariner 43 378 -208 186 394 51 15 chr2 11985337 11985474 -238702380 - MIR SINE MIR -4 258 117 4440 235 91 102 chr2 11986115 11987043 -238700811 + L1ME1 LINE L1 52 989 -5407 2205 65 4 4 chr2 11987043 11987322 -238700532 + AluY SINE Alu 1 279 -32 4440 235 91 102 chr2 11987322 11987362 -238700492 + L1ME1 LINE L1 989 1028 -5368 704 103 43 9 chr2 11987362 11987478 -238700376 + AluSg/x SINE Alu 182 301 -8 4440 235 91 102 chr2 11987478 11988891 -238698963 + L1ME1 LINE L1 1028 2520 -3876 2924 241 67 22 chr2 11988889 11990551 -238697303 + L1ME1 LINE L1 4492 6215 -20 * 274 305 58 94 chr2 11991479 11991787 -238696067 - L2 LINE L2 -9 3263 2967 216 97 0 0 chr2 11991789 11991820 -238696034 + (A)n Simple_repeat Simple_repeat 1 31 0 2698 202 6 14 chr2 11992076 11992566 -238695288 - MER66B LTR ERV1 0 486 1 198 354 40 0 chr2 11993350 11993449 -238694405 + MIR SINE MIR 148 250 -12 24 0 0 0 chr2 11993700 11993724 -238694130 + AT_rich Low_complexity Low_complexity 1 24 0 2373 124 33 33 chr2 11994030 11994394 -238693460 - THE1B LTR MaLR 0 364 1 255 321 0 12 chr2 11994901 11994985 -238692869 - MIR SINE MIR -133 129 47 21 0 0 0 chr2 11995053 11995074 -238692780 + AT_rich Low_complexity Low_complexity 1 21 0 629 266 77 65 chr2 11995405 11995799 -238692055 + MLT1H LTR MaLR 16 421 -128 268 328 22 39 chr2 11996203 11996337 -238691517 + MIR SINE MIR 22 152 -64 499 271 28 44 chr2 11996826 11997007 -238690847 + HsTC2 DNA Tc2 1 178 -1720 355 203 10 173 chr2 11997009 11997211 -238690643 + HsTC2 DNA Tc2 1732 1900 0 382 304 102 42 chr2 11997723 11998104 -238689750 + LTR33A LTR ERVL 53 456 -67 297 328 33 16 chr2 11998487 11998609 -238689245 - MIR SINE MIR -76 186 63 2194 94 12 44 chr2 11998680 11999000 -238688854 + AluSx SINE Alu 1 310 -2 289 314 58 0 chr2 11999155 11999276 -238688578 + L2 LINE L2 3186 3313 0 260 287 8 74 chr2 11999365 11999487 -238688367 - L2 LINE L2 0 3272 3159 299 82 55 0 chr2 11999963 12000036 -238687818 + (TA)n Simple_repeat Simple_repeat 1 77 0 51 0 0 0 chr2 12000036 12000087 -238687767 + AT_rich Low_complexity Low_complexity 1 51 0 360 293 0 0 chr2 12000365 12000440 -238687414 - MIR SINE MIR -64 144 70 390 269 123 38 chr2 12001428 12001640 -238686214 + MIR SINE MIR 20 249 -13 1075 124 0 31 chr2 12001911 12002072 -238685782 - MER4E LTR ERV1 0 766 611 * 2176 104 16 7 chr2 12002067 12002376 -238685478 - MER4E LTR ERV1 -466 313 2 214 183 169 42 chr2 12002399 12002470 -238685384 - MIR SINE MIR -136 126 47 360 0 0 0 chr2 12003400 12003440 -238684414 + (TG)n Simple_repeat Simple_repeat 2 41 0 351 257 26 10 chr2 12003489 12003608 -238684246 + MIR SINE MIR 28 149 -59 940 208 33 9 chr2 12003614 12003826 -238684028 + LTR8A LTR ERV1 1 217 -510 3632 62 0 7 chr2 12003826 12004277 -238683577 + LTR7 LTR ERV1 1 448 -2 20488 88 59 50 chr2 12004279 12007541 -238680313 + HERVH LTR ERV1 1 3290 -4423 3308 124 8 6 chr2 12007531 12008032 -238679822 + HERVH LTR ERV1 3492 3993 -3720 * 4242 153 3 1 chr2 12008034 12008695 -238679159 + HERVH LTR ERV1 4488 5149 -2564 1389 134 18 5 chr2 12008696 12008913 -238678941 + HERVH LTR ERV1 5600 5819 -1894 * 2696 58 45 13 chr2 12008911 12009291 -238678563 + HERVH LTR ERV1 7322 7713 0 3567 59 0 22 chr2 12009291 12009749 -238678105 + LTR7 LTR ERV1 1 448 -2 1800 178 100 57 chr2 12009759 12010249 -238677605 + LTR8A LTR ERV1 214 724 -3 4464 101 0 0 chr2 12010604 12011158 -238676696 - MER41A LTR ERV1 0 554 1 2278 95 10 0 chr2 12012705 12012999 -238674855 + AluSc SINE Alu 1 297 -12 207 277 114 72 chr2 12014832 12014998 -238672856 - MIR SINE MIR -71 191 19 1768 127 0 16 chr2 12015105 12015357 -238672497 - AluSx SINE Alu -16 296 49 312 337 95 12 chr2 12015429 12015598 -238672256 + MIR3 SINE MIR 22 204 -4 2039 114 0 36 chr2 12016013 12016321 -238671533 - AluSx SINE Alu -13 299 3 240 250 88 38 chr2 12016762 12016842 -238671012 - L2 LINE L2 -51 3262 3179 546 313 109 37 chr2 12016937 12017231 -238670623 - MLT1I LTR MaLR -13 396 82 294 251 64 22 chr2 12018005 12018121 -238669733 + MIR SINE MIR 29 153 -55 242 175 0 0 chr2 12018165 12018205 -238669649 - MLT2D LTR ERVL -8 389 350 207 294 0 0 chr2 12018205 12018256 -238669598 + (TATG)n Simple_repeat Simple_repeat 3 53 0 1632 198 24 45 chr2 12018273 12018647 -238669207 - MLT2D LTR ERVL -48 366 1 215 208 42 0 chr2 12018647 12018695 -238669159 + GA-rich Low_complexity Low_complexity 1 50 0 1825 143 0 0 chr2 12019664 12019930 -238667924 + AluSx SINE Alu 1 266 -46 2328 124 31 6 chr2 12021341 12021695 -238666159 - THE1B LTR MaLR 0 364 2 29 47 0 0 chr2 12023157 12023200 -238664654 + AT_rich Low_complexity Low_complexity 1 43 0 183 185 46 46 chr2 12023345 12023410 -238664444 + MIR3 SINE MIR 99 163 -45 2300 119 73 14 chr2 12023716 12024060 -238663794 - THE1B LTR MaLR 0 364 1 230 230 92 35 chr2 12024438 12024525 -238663329 - L2 LINE L2 -27 3245 3154 221 380 72 6 chr2 12025005 12025171 -238662683 + MIR SINE MIR 57 233 -29 305 329 80 0 chr2 12025999 12026136 -238661718 + L2 LINE L2 3109 3256 -16 181 260 20 20 chr2 12026158 12026208 -238661646 - L2 LINE L2 -14 3258 3209 543 317 28 36 chr2 12026717 12027080 -238660774 - LTR16B LTR ERVL 0 464 105 298 262 6 81 chr2 12027752 12027924 -238659930 + L2 LINE L2 3155 3313 0 279 309 81 0 chr2 12027928 12028064 -238659790 - MIR SINE MIR -79 183 37 279 284 0 0 chr2 12028213 12028294 -238659560 - MIR SINE MIR -70 192 112 335 245 65 19 chr2 12028349 12028504 -238659350 + L2 LINE L2 2942 3103 -210 2299 86 7 13 chr2 12028702 12029005 -238658849 - AluSg SINE Alu 0 310 10 363 347 47 0 chr2 12029146 12029316 -238658538 - L3b LINE CR1 -98 1485 1308 224 331 97 8 chr2 12029482 12029606 -238658248 + MIR SINE MIR 48 182 -80 1456 181 60 11 chr2 12029672 12029777 -238658077 + AluJo SINE Alu 11 109 -203 294 29 0 0 chr2 12029777 12029812 -238658042 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1456 181 60 11 chr2 12029812 12029988 -238657866 + AluJo SINE Alu 109 306 -6 242 188 153 24 chr2 12030607 12030692 -238657162 - MIR SINE MIR -67 141 46 * 475 273 70 32 chr2 12030689 12030876 -238656978 + MIR SINE MIR 69 262 0 250 274 150 26 chr2 12030884 12030997 -238656857 - MIR SINE MIR -62 146 20 1989 159 3 0 chr2 12031044 12031353 -238656501 + AluJb SINE Alu 3 312 0 210 310 0 14 chr2 12031487 12031558 -238656296 + MER5A DNA MER1_type 47 116 -73 24 67 0 0 chr2 12031854 12031899 -238655955 + AT_rich Low_complexity Low_complexity 1 45 0 274 240 52 21 chr2 12031901 12031997 -238655857 - Charlie7 DNA MER1_type -2511 101 3 2257 124 3 0 chr2 12032481 12032788 -238655066 + AluSx SINE Alu 1 308 -4 266 269 19 46 chr2 12033141 12033249 -238654605 + MIR SINE MIR 85 189 -73 365 339 75 54 chr2 12033507 12033796 -238654058 - L2 LINE L2 -5 3267 2966 2067 128 3 0 chr2 12033796 12034093 -238653761 + AluSg SINE Alu 1 298 -12 365 339 75 54 chr2 12034093 12034192 -238653662 - L2 LINE L2 -306 2966 2871 280 272 25 0 chr2 12034219 12034300 -238653554 - L2 LINE L2 -546 2768 2686 243 262 166 28 chr2 12034340 12034485 -238653369 - MER5B DNA MER1_type 0 178 14 656 234 28 41 chr2 12034689 12034907 -238652947 + MLT1C LTR MaLR 253 467 0 204 125 0 0 chr2 12035463 12035495 -238652359 + (GA)n Simple_repeat Simple_repeat 2 33 0 270 306 0 0 chr2 12035495 12035580 -238652274 + (TG)n Simple_repeat Simple_repeat 2 86 0 462 365 25 8 chr2 12035750 12035994 -238651860 + MIR SINE MIR 1 248 -14 272 289 105 59 chr2 12036805 12036957 -238650897 - MIR SINE MIR -70 192 34 395 338 40 22 chr2 12037171 12037396 -238650458 - L3 LINE CR1 -372 1205 977 207 0 0 0 chr2 12037549 12037572 -238650282 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1692 145 8 4 chr2 12037575 12037830 -238650024 - AluSx SINE Alu -31 281 26 273 244 33 11 chr2 12038354 12038444 -238649410 + MIR SINE MIR 37 128 -134 1120 229 190 44 chr2 12038699 12039135 -238648719 + MLT1D LTR MaLR 1 500 -5 283 311 10 0 chr2 12039169 12039253 -238648601 - MIR SINE MIR -78 130 42 194 382 29 15 chr2 12039647 12039783 -238648071 + MIR3 SINE MIR 45 182 -26 215 333 13 0 chr2 12040475 12040550 -238647304 - MIR SINE MIR -68 140 65 24 32 0 0 chr2 12040667 12040698 -238647156 + AT_rich Low_complexity Low_complexity 1 31 0 192 336 148 0 chr2 12041330 12041452 -238646402 - MIR3 SINE MIR -5 203 64 1947 139 37 6 chr2 12043527 12043879 -238643975 - L1MD1 LINE L1 0 6242 5880 242 269 19 10 chr2 12043880 12043984 -238643870 - L1M4 LINE L1 -1778 4368 4264 980 199 26 26 chr2 12044031 12044262 -238643592 - L1M4 LINE L1 -1888 4258 4028 188 352 46 19 chr2 12044603 12044711 -238643143 - MIR SINE MIR -71 191 81 191 340 130 0 chr2 12044905 12045005 -238642849 + L2 LINE L2 3158 3270 -2 284 320 78 24 chr2 12045146 12045366 -238642488 + MIR SINE MIR 19 248 -14 1708 171 7 21 chr2 12045376 12045663 -238642191 + AluJo SINE Alu 1 283 -29 21 0 0 0 chr2 12046949 12046970 -238640884 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 12046981 12047002 -238640852 + AT_rich Low_complexity Low_complexity 1 21 0 357 219 61 0 chr2 12048017 12048099 -238639755 - MER94 DNA DNA -47 87 1 228 157 39 0 chr2 12048629 12048680 -238639174 - MER5A DNA MER1_type -64 125 73 256 208 66 66 chr2 12049196 12049302 -238638552 - MIR SINE MIR -46 216 111 417 95 0 0 chr2 12049628 12049691 -238638163 + (TG)n Simple_repeat Simple_repeat 1 63 0 414 0 0 0 chr2 12049701 12049747 -238638107 + (TA)n Simple_repeat Simple_repeat 1 46 0 180 0 0 0 chr2 12049945 12049965 -238637889 + (GA)n Simple_repeat Simple_repeat 1 20 0 212 288 225 9 chr2 12051502 12051613 -238636241 + MIR SINE MIR 47 181 -81 538 279 42 42 chr2 12052247 12052484 -238635370 + MIR SINE MIR 13 249 -13 739 253 81 33 chr2 12053742 12054015 -238633839 + L2 LINE L2 3027 3312 -1 459 194 0 0 chr2 12054019 12054122 -238633732 + GA-rich Low_complexity Low_complexity 2 104 0 509 251 34 40 chr2 12054405 12054580 -238633274 - MIR SINE MIR -10 252 79 202 330 73 9 chr2 12054631 12054740 -238633114 + MIR SINE MIR 37 152 -56 237 240 188 0 chr2 12055143 12055247 -238632607 + L2 LINE L2 2921 3059 -254 261 349 8 47 chr2 12055339 12055468 -238632386 + L2 LINE L2 3134 3257 -15 197 191 24 0 chr2 12056623 12056665 -238631189 - L2 LINE L2 -14 3258 3216 225 278 89 0 chr2 12056765 12056855 -238630999 + L2 LINE L2 2968 3065 -207 322 369 0 0 chr2 12056962 12057065 -238630789 + L2 LINE L2 3133 3235 -37 238 318 42 48 chr2 12057080 12057269 -238630585 - MLT1J2 LTR MaLR 0 450 263 2306 113 48 22 chr2 12057614 12057969 -238629885 - THE1B LTR MaLR 0 364 1 2329 90 20 0 chr2 12058723 12059022 -238628832 - AluSc SINE Alu -3 306 2 455 299 28 49 chr2 12059141 12059425 -238628429 - L2 LINE L2 -443 2871 2594 215 253 0 11 chr2 12059974 12060065 -238627789 + GA-rich Low_complexity Low_complexity 4 93 0 256 242 67 107 chr2 12060229 12060407 -238627447 + LTR33A LTR ERVL 25 195 -328 459 259 36 7 chr2 12060492 12060631 -238627223 + LTR33A LTR ERVL 365 507 -16 195 300 48 88 chr2 12061673 12061900 -238625954 + L2 LINE L2 2967 3184 -88 191 35 0 35 chr2 12062169 12062198 -238625656 + (TCC)n Simple_repeat Simple_repeat 3 30 0 258 296 53 38 chr2 12062470 12062602 -238625252 + MIR SINE MIR 65 198 -64 2160 182 26 19 chr2 12062671 12063089 -238624765 + MLT1C LTR MaLR 21 441 -26 315 247 37 25 chr2 12063368 12063449 -238624405 - MER5B DNA MER1_type -79 99 18 201 93 56 56 chr2 12063883 12063937 -238623917 + A-rich Low_complexity Low_complexity 4 57 0 180 295 0 13 chr2 12064080 12064158 -238623696 + L2 LINE L2 2884 2960 -353 2258 89 89 0 chr2 12065174 12065498 -238622356 - MER4C LTR ERV1 -5 460 108 467 298 57 24 chr2 12066541 12066789 -238621065 + MIR SINE MIR 2 257 -5 4331 162 47 10 chr2 12067328 12068755 -238619099 + L1MA6 LINE L1 4640 6120 -180 399 226 220 21 chr2 12068812 12068998 -238618856 + MIR SINE MIR 24 246 -16 1008 237 86 4 chr2 12069439 12069696 -238618158 - MLT1C LTR MaLR 0 467 190 1107 158 11 0 chr2 12069696 12069880 -238617974 - MLT1-int LTR MaLR -1185 186 1 1586 154 30 129 chr2 12069880 12069920 -238617934 - MLT2C1 LTR ERVL 0 397 355 351 0 0 0 chr2 12069920 12069959 -238617895 + (TG)n Simple_repeat Simple_repeat 1 39 0 1586 154 30 129 chr2 12069959 12070119 -238617735 - MLT2C1 LTR ERVL -42 355 181 2410 78 0 3 chr2 12070119 12070426 -238617428 - AluY SINE Alu -5 306 1 1586 154 30 129 chr2 12070426 12070665 -238617189 - MLT2C1 LTR ERVL -216 181 1 201 281 61 49 chr2 12070746 12070828 -238617026 + MIR3 SINE MIR 125 207 -1 369 306 122 6 chr2 12071504 12071684 -238616170 + MIR SINE MIR 7 207 -55 425 243 103 76 chr2 12071781 12072057 -238615797 + MLT1H LTR MaLR 1 314 -235 243 295 51 0 chr2 12072117 12072195 -238615659 + MLT1H LTR MaLR 454 535 -14 288 0 0 0 chr2 12073706 12073738 -238614116 + (TG)n Simple_repeat Simple_repeat 2 33 0 342 228 80 68 chr2 12073932 12074094 -238613760 - MER114 LTR ERV -27 621 458 657 250 60 5 chr2 12074107 12074323 -238613531 - MER114 LTR ERV -420 228 1 387 350 93 9 chr2 12075958 12076184 -238611670 - MIR SINE MIR -16 246 2 208 261 0 0 chr2 12076718 12076764 -238611090 - L2 LINE L2 -5 3267 3222 283 145 0 53 chr2 12076871 12076947 -238610907 + (GGAGAA)n Simple_repeat Simple_repeat 5 76 0 218 179 18 0 chr2 12077219 12077275 -238610579 + (TGAA)n Simple_repeat Simple_repeat 1 57 0 397 263 104 45 chr2 12077549 12077770 -238610084 - MLT1L LTR MaLR -206 409 73 281 308 188 0 chr2 12078215 12078348 -238609506 - MIR SINE MIR -19 243 86 186 359 58 29 chr2 12078829 12078932 -238608922 - L2 LINE L2 -8 3264 3159 729 273 95 71 chr2 12079027 12079533 -238608321 + LTR33 LTR ERVL 1 518 -3 296 257 155 20 chr2 12079534 12079682 -238608172 - MIR3 SINE MIR -15 193 26 180 259 111 0 chr2 12080671 12080725 -238607129 + MIR SINE MIR 88 147 -61 761 306 52 33 chr2 12081304 12081804 -238606050 - MLT1H1 LTR MaLR -13 536 1 281 254 0 0 chr2 12081952 12082007 -238605847 + L2 LINE L2 3236 3290 -23 281 318 23 0 chr2 12082399 12082487 -238605367 - L2 LINE L2 0 3272 3183 1518 207 83 115 chr2 12082747 12083181 -238604673 + MLT1E LTR MaLR 148 593 0 217 292 124 68 chr2 12083392 12083553 -238604301 + L2 LINE L2 2866 3035 -237 261 128 0 0 chr2 12083597 12083644 -238604210 + (TA)n Simple_repeat Simple_repeat 1 47 0 338 260 70 10 chr2 12083644 12083744 -238604110 - L1MC4 LINE L1 -1323 6719 6614 * 398 194 0 82 chr2 12083669 12083767 -238604087 + L1MC4 LINE L1 6614 6703 -1339 345 198 27 90 chr2 12083774 12083867 -238603987 + L1MC4 LINE L1 6613 6699 -1343 471 113 0 0 chr2 12083867 12083938 -238603916 + (CA)n Simple_repeat Simple_repeat 2 72 0 345 198 27 90 chr2 12083938 12083955 -238603899 + L1MC4 LINE L1 6699 6716 -1326 1454 198 52 38 chr2 12084173 12084541 -238603313 + MLT1B LTR MaLR 1 373 -17 1333 133 90 0 chr2 12084630 12084841 -238603013 + MER30 DNA MER1_type 1 230 0 210 316 61 44 chr2 12084896 12085010 -238602844 + MIR SINE MIR 97 212 -50 880 220 24 24 chr2 12085080 12085330 -238602524 - MER96B DNA MER1_type? -167 250 1 235 220 34 0 chr2 12085884 12085926 -238601928 + GA-rich Low_complexity Low_complexity 4 50 -14 1972 201 49 82 chr2 12085926 12086498 -238601356 - MLT2B3 LTR ERVL -1 553 1 235 220 34 0 chr2 12086498 12086514 -238601340 + GA-rich Low_complexity Low_complexity 50 64 0 454 308 63 0 chr2 12086590 12086749 -238601105 - MIR SINE MIR -49 213 45 250 310 70 51 chr2 12087495 12087653 -238600201 + MIR SINE MIR 76 236 -26 231 305 78 35 chr2 12087857 12087998 -238599856 - MIR SINE MIR -95 167 21 206 216 0 0 chr2 12088429 12088466 -238599388 + (CAAG)n Simple_repeat Simple_repeat 2 38 0 534 172 0 0 chr2 12088959 12089058 -238598796 + (CA)n Simple_repeat Simple_repeat 2 100 0 312 231 130 19 chr2 12089069 12089177 -238598677 + MIR SINE MIR 69 188 -74 2027 163 28 0 chr2 12090139 12090494 -238597360 + MLT1A1 LTR MaLR 1 365 0 210 260 135 31 chr2 12090496 12090592 -238597262 - MER91C DNA MER1_type -30 110 5 224 306 16 0 chr2 12090774 12090836 -238597018 + L2 LINE L2 3209 3271 -1 2212 96 0 0 chr2 12091188 12091480 -238596374 - AluSc SINE Alu -17 292 1 274 398 128 0 chr2 12091480 12091691 -238596163 - MIR SINE MIR -18 244 7 317 253 121 0 chr2 12092274 12092365 -238595489 + L2 LINE L2 3200 3301 -12 408 313 53 65 chr2 12092385 12092631 -238595223 + L2 LINE L2 3022 3264 -8 280 296 25 75 chr2 12092636 12092803 -238595051 - MIR SINE MIR -60 148 32 257 167 49 108 chr2 12093141 12093243 -238594611 - MER94 DNA DNA -25 109 14 23 0 0 0 chr2 12094140 12094163 -238593691 + GC_rich Low_complexity Low_complexity 1 23 0 252 143 13 78 chr2 12094318 12094395 -238593459 + G-rich Low_complexity Low_complexity 2 73 0 306 346 31 8 chr2 12099512 12099639 -238588215 - MIR3 SINE MIR -49 159 30 335 271 122 0 chr2 12100138 12100245 -238587609 + MIR3 SINE MIR 40 159 -49 470 292 49 7 chr2 12100473 12100617 -238587237 - MIR SINE MIR -50 212 63 328 268 85 37 chr2 12101616 12101780 -238586074 - L2 LINE L2 -208 3064 2893 181 344 42 21 chr2 12103401 12103497 -238584357 - MIR3 SINE MIR -34 174 77 383 313 112 1 chr2 12104598 12104742 -238583112 + MIR SINE MIR 46 197 -65 504 259 127 25 chr2 12105556 12105753 -238582101 + MIR SINE MIR 34 250 -12 215 320 27 13 chr2 12107377 12107452 -238580402 + MIR SINE MIR 187 262 0 575 254 46 8 chr2 12107510 12107640 -238580214 - L2 LINE L2 -2 3311 3177 471 269 174 6 chr2 12107704 12107871 -238579983 - MIR SINE MIR -62 200 6 181 0 33 33 chr2 12108087 12108117 -238579737 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 342 250 90 10 chr2 12108487 12108587 -238579267 - L2 LINE L2 -2 3311 3204 231 349 132 9 chr2 12109053 12109159 -238578695 - MIR3 SINE MIR -52 156 38 536 253 8 20 chr2 12110606 12110760 -238577094 + MIR SINE MIR 22 150 -58 251 294 88 67 chr2 12110919 12111157 -238576697 + MIR SINE MIR 20 262 0 232 297 33 22 chr2 12111211 12111302 -238576552 - MIR3 SINE MIR -6 202 111 207 296 20 10 chr2 12111848 12111946 -238575908 - L2 LINE L2 -297 3016 2918 232 360 9 26 chr2 12112140 12112254 -238575600 + L2 LINE L2 3154 3265 -7 196 273 47 47 chr2 12112473 12112601 -238575253 - MIR SINE MIR -61 147 20 216 321 56 37 chr2 12112991 12113153 -238574701 + MIR SINE MIR 69 233 -29 240 328 0 0 chr2 12114147 12114205 -238573649 - L2 LINE L2 -23 3290 3233 359 299 19 116 chr2 12115191 12115246 -238572608 - MIR3 SINE MIR -2 206 147 551 124 21 10 chr2 12115246 12115343 -238572511 + L1MB3 LINE L1 6076 6173 -10 359 299 19 116 chr2 12115343 12115494 -238572360 - MIR3 SINE MIR -61 147 20 1875 124 53 0 chr2 12116752 12117034 -238570820 - AluSg SINE Alu -13 297 1 428 283 72 33 chr2 12117150 12117330 -238570524 + MIR SINE MIR 4 190 -72 207 247 148 62 chr2 12117428 12117509 -238570345 + MIR SINE MIR 46 133 -129 400 245 35 84 chr2 12117553 12117696 -238570158 + L2 LINE L2 3134 3269 -3 296 294 96 40 chr2 12120414 12120591 -238567263 - MIR SINE MIR -69 193 7 188 302 65 99 chr2 12120929 12121161 -238566693 - L2 LINE L2 -125 3147 2924 236 211 19 19 chr2 12121357 12121409 -238566445 + L2 LINE L2 3209 3260 -12 1928 202 19 22 chr2 12122260 12122626 -238565228 + MLT1A1 LTR MaLR 1 365 0 310 341 66 0 chr2 12123240 12123391 -238564463 - MIR SINE MIR -68 140 34 1649 210 16 25 chr2 12123697 12124063 -238563791 - MLT1A1 LTR MaLR -2 363 1 474 264 16 24 chr2 12124080 12124205 -238563649 + MIR SINE MIR 19 142 -66 324 146 36 0 chr2 12124754 12124809 -238563045 + MLT1C LTR MaLR 1 57 -410 846 129 14 7 chr2 12124809 12124948 -238562906 - MLT1A1 LTR MaLR -225 140 1 251 329 13 13 chr2 12124965 12125041 -238562813 + MIR SINE MIR 19 94 -114 1497 218 62 14 chr2 12125047 12125401 -238562453 + MLT1C LTR MaLR 66 436 -31 327 270 30 10 chr2 12126146 12126246 -238561608 - L1MA10 LINE L1 -7 6327 6226 * 563 284 84 8 chr2 12126239 12126396 -238561458 - L1M4 LINE L1 -1818 4397 4214 189 0 0 0 chr2 12126396 12126417 -238561437 + (TTA)n Simple_repeat Simple_repeat 2 22 0 563 284 84 8 chr2 12126417 12126498 -238561356 - L1M4 LINE L1 -2001 4214 4141 * 2371 233 56 26 chr2 12126482 12127413 -238560441 - L1MEc LINE L1 -3540 2675 1765 3056 305 44 26 chr2 12127519 12128701 -238559153 - ERVL LTR ERVL -2129 2867 1665 755 313 39 58 chr2 12128708 12129171 -238558683 - ERVL LTR ERVL -3520 1476 1023 1451 224 52 75 chr2 12129180 12129685 -238558169 - MLT1D LTR MaLR 0 505 13 1999 148 42 36 chr2 12129869 12130226 -238557628 + MER47A DNA MER2_type 1 359 -7 482 309 18 6 chr2 12130265 12130430 -238557424 - ERVL LTR ERVL -3720 2044 1878 342 68 0 0 chr2 12130553 12130597 -238557257 - MADE1 DNA Mariner 0 80 37 398 333 69 32 chr2 12130605 12130851 -238557003 - ERVL LTR ERVL -4327 669 415 1215 209 146 16 chr2 12130860 12131175 -238556679 + MLT1A1 LTR MaLR 10 365 0 699 316 45 11 chr2 12131274 12131540 -238556314 - ERVL LTR ERVL -4711 285 11 255 277 12 24 chr2 12132770 12132853 -238555001 - MIR3 SINE MIR -27 181 100 218 232 49 37 chr2 12132915 12132997 -238554857 + L2 LINE L2 3189 3271 -1 211 355 69 28 chr2 12134035 12134193 -238553661 + MIR3 SINE MIR 3 164 -66 201 143 0 29 chr2 12134814 12134849 -238553005 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 281 359 114 40 chr2 12134870 12135221 -238552633 - L2 LINE L2 -3 3269 2893 1784 160 21 30 chr2 12136008 12136345 -238551509 + MLT1A1 LTR MaLR 32 365 0 437 311 15 7 chr2 12136347 12136482 -238551372 + MIR SINE MIR 16 151 -111 531 257 66 7 chr2 12137070 12137222 -238550632 - MIR3 SINE MIR -12 196 36 306 289 11 67 chr2 12137452 12137542 -238550312 - L2 LINE L2 -42 3230 3146 517 315 65 53 chr2 12137798 12138119 -238549735 - MLT1K LTR MaLR -126 462 138 242 371 13 38 chr2 12139104 12139263 -238548591 + MIR3 SINE MIR 33 187 -21 222 279 82 40 chr2 12139903 12140079 -238547775 - MIR SINE MIR -66 142 11 303 192 0 0 chr2 12140964 12141016 -238546838 + MER53 DNA DNA 1 52 -137 284 364 8 8 chr2 12141106 12141224 -238546630 - MIR SINE MIR -125 137 20 390 195 54 81 chr2 12141346 12141495 -238546359 + MER104 DNA Tc2 1 145 -35 416 261 30 3 chr2 12142569 12142701 -238545153 - MIR SINE MIR -63 145 20 467 250 75 33 chr2 12143101 12143262 -238544592 + MIR SINE MIR 5 173 -63 182 320 111 107 chr2 12143239 12143464 -238544390 + L2 LINE L2 3023 3248 -24 * 362 288 38 11 chr2 12143802 12143944 -238543910 - MIR SINE MIR -64 144 18 328 254 73 34 chr2 12144675 12144830 -238543024 - MIR SINE MIR -42 220 59 238 285 35 36 chr2 12144851 12144960 -238542894 - MIR SINE MIR -102 106 3 201 169 15 62 chr2 12145183 12145248 -238542606 + CT-rich Low_complexity Low_complexity 3 64 0 357 287 105 0 chr2 12145668 12145811 -238542043 + MIR3 SINE MIR 24 181 -27 322 337 21 0 chr2 12146707 12146802 -238541052 + L3 LINE CR1 1467 1563 -14 233 119 24 0 chr2 12146892 12146934 -238540920 + CT-rich Low_complexity Low_complexity 2 44 0 421 199 7 40 chr2 12147007 12147158 -238540696 + GA-rich Low_complexity Low_complexity 2 147 0 267 268 14 0 chr2 12147186 12147257 -238540597 + GA-rich Low_complexity Low_complexity 3 74 0 231 313 0 50 chr2 12148800 12148880 -238538974 + MIR3 SINE MIR 15 90 -118 211 266 78 16 chr2 12148897 12148961 -238538893 - MIR SINE MIR -90 172 105 505 321 96 44 chr2 12149228 12149487 -238538367 - L2 LINE L2 -17 3296 3052 1872 121 92 0 chr2 12149487 12149759 -238538095 + AluSx SINE Alu 1 297 -15 505 321 96 44 chr2 12149759 12150099 -238537755 - L2 LINE L2 -261 3052 2643 2036 131 0 0 chr2 12150099 12150414 -238537440 + AluSx SINE Alu 1 315 0 505 321 96 44 chr2 12150414 12150498 -238537356 - L2 LINE L2 -670 2643 2565 1629 138 4 11 chr2 12150606 12150874 -238536980 + L1MA4 LINE L1 6035 6300 0 418 303 114 0 chr2 12152547 12152722 -238535132 + MIR SINE MIR 53 247 -15 368 292 41 18 chr2 12153416 12153590 -238534264 + MIR SINE MIR 2 174 -63 473 264 63 29 chr2 12154278 12154452 -238533402 + MER5A DNA MER1_type 7 186 -3 2115 146 50 19 chr2 12154911 12155275 -238532579 + THE1C LTR MaLR 1 375 0 23 33 0 0 chr2 12155531 12155561 -238532293 + AT_rich Low_complexity Low_complexity 1 30 0 415 265 118 12 chr2 12156506 12156676 -238531178 - MIR SINE MIR -56 206 19 866 281 121 25 chr2 12156695 12157143 -238530711 - MLT1H LTR MaLR -19 530 40 21 0 0 0 chr2 12157343 12157364 -238530490 + AT_rich Low_complexity Low_complexity 1 21 0 404 305 116 56 chr2 12157408 12157939 -238529915 + L2 LINE L2 2684 3271 -1 1058 97 0 0 chr2 12157966 12158110 -238529744 - L1PA4 LINE L1 -2 6153 6010 971 65 29 1 chr2 12158110 12158256 -238529598 + L1PA4 LINE L1 5923 6079 -86 203 295 42 32 chr2 12158602 12158697 -238529157 - L2 LINE L2 -2691 623 528 362 279 11 49 chr2 12158744 12158990 -238528864 + (TATATG)n Simple_repeat Simple_repeat 1 236 0 205 312 43 0 chr2 12159037 12159130 -238528724 + (TATATG)n Simple_repeat Simple_repeat 5 101 0 304 325 44 12 chr2 12159435 12159595 -238528259 + MIR3 SINE MIR 32 196 -12 236 269 138 39 chr2 12159909 12160039 -238527815 + MIR SINE MIR 50 192 -70 1689 216 74 9 chr2 12160498 12160960 -238526894 + Charlie4a DNA MER1_type 17 508 0 401 264 214 16 chr2 12161265 12161447 -238526407 - MIR SINE MIR -2 260 43 30 0 0 0 chr2 12162232 12162262 -238525592 + AT_rich Low_complexity Low_complexity 1 30 0 2372 127 33 25 chr2 12162340 12162701 -238525153 - THE1B LTR MaLR 0 364 1 11272 104 6 36 chr2 12162701 12164329 -238523525 - THE1B-int LTR MaLR 0 1580 2 2101 147 42 31 chr2 12164330 12164690 -238523164 - THE1B LTR MaLR 0 364 1 432 312 26 13 chr2 12164912 12165066 -238522788 - MIR SINE MIR -71 191 36 447 308 69 20 chr2 12165732 12165952 -238521902 + MIR SINE MIR 15 242 -20 203 329 25 0 chr2 12166210 12166289 -238521565 - L2 LINE L2 -7 3265 3185 550 320 90 46 chr2 12166861 12166954 -238520900 - HAL1b LINE L1 -631 717 630 7860 32 0 4 chr2 12166954 12167930 -238519924 - L1PA4 LINE L1 -2 6153 5176 550 320 90 46 chr2 12167930 12168270 -238519584 - HAL1b LINE L1 -718 630 265 21 36 0 0 chr2 12168823 12168851 -238519003 + AT_rich Low_complexity Low_complexity 1 28 0 577 347 98 33 chr2 12168899 12170070 -238517784 + L1M4 LINE L1 4151 5403 -743 399 113 12 88 chr2 12170149 12170229 -238517625 + MER58B DNA MER1_type 259 332 -9 6967 52 16 2 chr2 12170239 12171340 -238516514 + L1PA7 LINE L1 5036 6148 -6 2132 117 0 3 chr2 12171506 12171806 -238516048 - AluSg SINE Alu -11 299 1 22 35 0 0 chr2 12171821 12171850 -238516004 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 12171918 12171939 -238515915 + AT_rich Low_complexity Low_complexity 1 21 0 2138 117 0 13 chr2 12172328 12172627 -238515227 - AluSx SINE Alu -17 295 1 1833 139 0 24 chr2 12173106 12173401 -238514453 + AluSg SINE Alu 17 304 -6 251 313 114 15 chr2 12173619 12173750 -238514104 + L2 LINE L2 3168 3311 -2 352 290 178 0 chr2 12173851 12174020 -238513834 + MIR SINE MIR 56 254 -8 538 333 21 12 chr2 12174981 12175221 -238512633 - MIR SINE MIR -13 249 8 213 231 0 31 chr2 12176543 12176608 -238511246 + GA-rich Low_complexity Low_complexity 4 66 0 460 284 129 19 chr2 12177084 12177140 -238510714 - MER5A DNA MER1_type -14 175 127 5225 132 34 2 chr2 12177140 12177517 -238510337 + L1PA13 LINE L1 4313 4677 -1486 336 18 53 18 chr2 12177517 12177574 -238510280 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 5225 132 34 2 chr2 12177574 12178556 -238509298 + L1PA13 LINE L1 4677 5723 -440 306 0 0 0 chr2 12178556 12178590 -238509264 + (CA)n Simple_repeat Simple_repeat 2 35 0 5225 132 34 2 chr2 12178590 12179042 -238508812 + L1PA13 LINE L1 5723 6159 -4 460 284 129 19 chr2 12179042 12179140 -238508714 - MER5A DNA MER1_type -62 127 4 2934 138 6 26 chr2 12179252 12179751 -238508103 + LOR1a LTR ERV1 1 489 -8 283 369 103 34 chr2 12180228 12180461 -238507393 - L2 LINE L2 -208 3064 2816 203 170 0 19 chr2 12180857 12180910 -238506944 + (TA)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr2 12181079 12181100 -238506754 + AT_rich Low_complexity Low_complexity 1 21 0 2233 83 24 3 chr2 12183164 12183454 -238504400 + AluY SINE Alu 1 296 -15 432 357 40 12 chr2 12183469 12183721 -238504133 + L3 LINE CR1 1301 1559 -18 183 297 66 66 chr2 12184306 12184397 -238503457 + MIR SINE MIR 57 147 -115 266 278 52 43 chr2 12184737 12184852 -238503002 + MIR3 SINE MIR 81 196 -12 219 329 26 0 chr2 12185542 12185618 -238502236 + MIR SINE MIR 63 140 -122 250 397 45 13 chr2 12186488 12186712 -238501142 + MIR SINE MIR 21 251 -11 192 179 0 0 chr2 12186722 12186761 -238501093 + (TTA)n Simple_repeat Simple_repeat 3 41 0 247 313 0 0 chr2 12187458 12187541 -238500313 + GA-rich Low_complexity Low_complexity 2 84 0 3417 217 54 10 chr2 12188654 12189545 -238498309 + MER63C DNA MER1_type 1 930 0 397 157 29 0 chr2 12189634 12189704 -238498150 - MER7A DNA MER2_type -25 311 240 2031 219 68 39 chr2 12189747 12190447 -238497407 + L1ME1 LINE L1 5176 5889 -277 6020 125 91 13 chr2 12190457 12191598 -238496256 + Tigger3b DNA MER2_type 2 1231 0 534 202 0 26 chr2 12191606 12191720 -238496134 - MER7A DNA MER2_type -237 109 1 278 200 14 0 chr2 12191720 12191790 -238496064 + L1ME2 LINE L1 5908 5978 -186 2591 67 0 0 chr2 12191790 12192102 -238495752 + AluSq SINE Alu 1 312 -1 2221 84 3 24 chr2 12192149 12192466 -238495388 - AluSp SINE Alu 0 313 6 228 313 23 69 chr2 12193176 12193339 -238494515 + MIR SINE MIR 23 174 -63 22 0 0 0 chr2 12194239 12194261 -238493593 + AT_rich Low_complexity Low_complexity 1 22 0 1605 237 29 26 chr2 12194698 12195150 -238492704 + MLT1C LTR MaLR 2 454 -13 439 171 19 0 chr2 12195851 12195956 -238491898 + CT-rich Low_complexity Low_complexity 2 108 0 480 297 33 2 chr2 12196226 12196404 -238491450 - MIR SINE MIR -65 197 16 243 0 0 0 chr2 12196983 12197010 -238490844 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 442 275 94 52 chr2 12197994 12198227 -238489627 - MIR SINE MIR 0 262 20 237 167 0 37 chr2 12198962 12199016 -238488838 + CT-rich Low_complexity Low_complexity 3 54 0 195 373 0 0 chr2 12199086 12199158 -238488696 - MIR SINE MIR -66 142 71 3078 164 43 11 chr2 12200267 12200862 -238486992 - MER6A DNA MER2_type -13 592 -11 291 256 134 43 chr2 12201397 12201561 -238486293 + MIR3 SINE MIR 3 181 -27 210 86 0 103 chr2 12203068 12203126 -238484728 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 445 287 153 0 chr2 12204002 12204159 -238483695 - MER5A DNA MER1_type -5 184 4 255 376 30 51 chr2 12204161 12204358 -238483496 + MIR3 SINE MIR 16 208 0 2181 170 17 10 chr2 12204527 12204945 -238482909 + L1M2 LINE L1 5344 5764 -527 3715 115 89 74 chr2 12204946 12205719 -238482135 - LTR1 LTR ERV1 0 785 1 2533 43 0 7 chr2 12205790 12206095 -238481759 + AluY SINE Alu 1 303 -8 236 292 112 11 chr2 12206746 12206835 -238481019 + L2 LINE L2 3170 3267 -5 206 326 76 21 chr2 12207981 12208125 -238479729 - MIR SINE MIR -77 185 34 285 349 70 6 chr2 12208750 12208922 -238478932 + MIR SINE MIR 80 262 0 204 319 250 17 chr2 12209135 12209251 -238478603 + L2 LINE L2 3123 3265 -7 * 213 296 286 10 chr2 12209248 12209346 -238478508 + L2 LINE L2 3128 3252 -20 241 316 0 0 chr2 12209439 12209496 -238478358 + MIR SINE MIR 28 84 -124 599 316 123 30 chr2 12209669 12210074 -238477780 + L2 LINE L2 2871 3313 0 258 317 0 0 chr2 12210593 12210653 -238477201 + MIR3 SINE MIR 125 184 -24 353 306 73 48 chr2 12211104 12211310 -238476544 + MIR SINE MIR 20 230 -32 870 190 31 20 chr2 12212418 12212541 -238475313 + MER3 DNA MER1_type 9 136 -73 2037 118 10 0 chr2 12212541 12212830 -238475024 - AluSx SINE Alu -20 292 1 870 190 31 20 chr2 12212830 12212901 -238474953 + MER3 DNA MER1_type 136 205 -4 1047 273 39 56 chr2 12213167 12213722 -238474132 + MLT1G3 LTR MaLR 1 485 -45 288 0 0 0 chr2 12213722 12213754 -238474100 + (TG)n Simple_repeat Simple_repeat 1 32 0 1047 273 39 56 chr2 12213754 12213800 -238474054 + MLT1G3 LTR MaLR 485 530 0 224 305 12 12 chr2 12214187 12214269 -238473585 + MIR SINE MIR 99 180 -82 2064 100 33 10 chr2 12215535 12215836 -238472018 - AluY SINE Alu -3 308 1 2436 77 0 26 chr2 12216320 12216630 -238471224 + AluSp SINE Alu 1 302 -11 279 351 131 16 chr2 12216634 12216825 -238471029 - MIR SINE MIR -13 249 37 2022 234 66 38 chr2 12216913 12217515 -238470339 + MLT1E2 LTR MaLR 8 626 0 180 125 0 0 chr2 12217532 12217564 -238470290 + (TG)n Simple_repeat Simple_repeat 2 33 0 273 409 22 0 chr2 12218252 12218389 -238469465 - L2 LINE L2 -31 3241 3102 2197 114 0 0 chr2 12218830 12219111 -238468743 + AluSc SINE Alu 1 281 -28 262 0 0 0 chr2 12219111 12219140 -238468714 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 335 223 21 34 chr2 12220243 12220362 -238467492 - LTR33A LTR ERVL -16 779 389 3024 175 19 7 chr2 12220364 12220902 -238466952 + L1MC/D LINE L1 5276 5819 -514 3388 147 10 34 chr2 12220902 12221145 -238466709 + L1MC1 LINE L1 5757 6004 -329 2394 76 13 0 chr2 12221145 12221448 -238466406 + AluSg SINE Alu 1 307 -3 3388 147 10 34 chr2 12221448 12221788 -238466066 + L1MC1 LINE L1 6004 6328 -5 256 252 103 52 chr2 12222151 12222306 -238465548 - LTR50 LTR ERVL -614 181 19 235 329 92 48 chr2 12222410 12222638 -238465216 - MIR SINE MIR -5 257 20 410 326 93 33 chr2 12223803 12224018 -238463836 - MIR SINE MIR -6 256 29 1960 165 17 31 chr2 12224818 12225169 -238462685 - MER7A DNA MER2_type -1 345 2 1183 191 58 95 chr2 12226405 12226529 -238461325 + MSTD LTR MaLR 60 187 -209 1565 155 0 54 chr2 12226529 12226807 -238461047 - AluSx SINE Alu -11 301 39 1183 191 58 95 chr2 12226807 12227028 -238460826 + MSTD LTR MaLR 187 392 -4 195 293 76 88 chr2 12227051 12227300 -238460554 - L2 LINE L2 -38 3275 3030 329 376 20 36 chr2 12227523 12227773 -238460081 - L2 LINE L2 -570 2744 2499 764 301 53 4 chr2 12228151 12228278 -238459576 + MIR SINE MIR 4 123 -139 4818 98 71 8 chr2 12228278 12228994 -238458860 + L1MA1 LINE L1 5542 6302 0 764 301 53 4 chr2 12228994 12229112 -238458742 + MIR SINE MIR 123 261 -1 305 295 13 0 chr2 12229209 12229287 -238458567 + L2 LINE L2 3234 3312 -1 2428 68 3 3 chr2 12229456 12229750 -238458104 - AluSq SINE Alu -15 298 5 8044 133 42 107 chr2 12230301 12232117 -238455737 - pTR5 LTR ERV1 -1 2437 741 297 0 0 0 chr2 12233173 12233206 -238454648 + (CA)n Simple_repeat Simple_repeat 2 34 0 266 190 52 0 chr2 12233275 12233333 -238454521 - MLT1K LTR MaLR -5 583 523 617 343 102 26 chr2 12233600 12234023 -238453831 - MLT1K LTR MaLR -131 457 3 276 367 48 37 chr2 12234078 12234266 -238453588 + L2 LINE L2 2898 3087 -185 192 222 0 0 chr2 12234399 12234435 -238453419 - L2 LINE L2 -12 3301 3266 243 88 0 0 chr2 12234458 12234492 -238453362 + (TG)n Simple_repeat Simple_repeat 1 34 0 254 265 36 12 chr2 12234504 12234587 -238453267 - MIR3 SINE MIR -6 202 118 248 175 16 0 chr2 12234798 12234861 -238452993 + CT-rich Low_complexity Low_complexity 2 65 0 251 340 154 26 chr2 12235577 12236111 -238451743 - L2 LINE L2 -37 3276 2662 1048 263 56 91 chr2 12236149 12236458 -238451396 + MLT1F1 LTR MaLR 67 352 -215 2217 149 37 21 chr2 12236458 12236840 -238451014 - MLT1B LTR MaLR -2 388 1 1048 263 56 91 chr2 12236840 12237047 -238450807 + MLT1F1 LTR MaLR 352 565 -2 1454 244 13 21 chr2 12237050 12237544 -238450310 + MLT1F-int LTR MaLR 1 606 -765 3436 148 0 0 chr2 12237745 12238231 -238449623 - MER66B LTR ERV1 0 486 1 296 331 62 38 chr2 12238275 12238435 -238449419 + MLT1F-int LTR MaLR 693 856 -515 320 286 135 0 chr2 12238856 12238982 -238448872 + MLT1F-int LTR MaLR 1227 1369 -2 1231 217 72 136 chr2 12238988 12239458 -238448396 + MLT1F LTR MaLR 5 433 -109 2305 77 0 51 chr2 12239458 12239771 -238448083 - AluY SINE Alu -14 297 1 1231 217 72 136 chr2 12239771 12239872 -238447982 + MLT1F LTR MaLR 433 539 -3 218 245 0 20 chr2 12239873 12239922 -238447932 - L2 LINE L2 -644 2670 2623 714 261 48 24 chr2 12240324 12240661 -238447193 - L1M4 LINE L1 -2815 3331 2987 1863 252 62 22 chr2 12240661 12241213 -238446641 + MER76 LTR ERV 1 574 -114 783 97 0 9 chr2 12241231 12241345 -238446509 + LOR1a LTR ERV1 1 113 -384 2442 66 0 3 chr2 12241900 12242205 -238445649 + AluYa5 SINE Alu 1 304 -7 24 32 0 0 chr2 12242417 12242448 -238445406 + AT_rich Low_complexity Low_complexity 1 31 0 1185 244 86 44 chr2 12242587 12243063 -238444791 - LTR33 LTR ERVL -25 496 1 1067 181 10 5 chr2 12243280 12243473 -238444381 + MER50 LTR ERV1 1 194 -540 2028 129 0 0 chr2 12243629 12243916 -238443938 + AluSx SINE Alu 1 287 -25 433 263 61 37 chr2 12244257 12244546 -238443308 + L1ME3A LINE L1 2725 3079 -3067 3696 209 6 0 chr2 12244546 12245244 -238442610 + L1MB8 LINE L1 5475 6176 -2 433 263 61 37 chr2 12245244 12245337 -238442517 + L1ME3A LINE L1 3079 3168 -2978 311 322 0 0 chr2 12245476 12245566 -238442288 + L1MC4 LINE L1 6614 6703 -1339 6154 97 6 0 chr2 12245572 12246621 -238441233 - L1PA8A LINE L1 -18 6113 5037 797 155 6 98 chr2 12246632 12246806 -238441048 - MER58A DNA MER1_type -10 214 57 230 183 167 0 chr2 12246829 12246889 -238440965 - Charlie8 DNA MER1_type -2347 70 1 313 200 21 84 chr2 12246925 12247020 -238440834 - MER58A DNA MER1_type -18 89 1 * 607 207 0 16 chr2 12247020 12247139 -238440715 + MER105 DNA DNA 46 162 -42 905 277 96 54 chr2 12247256 12247923 -238439931 + L1ME3A LINE L1 3257 3958 -2188 2271 90 0 0 chr2 12247923 12248223 -238439631 + AluY SINE Alu 2 301 -10 905 277 96 54 chr2 12248223 12248277 -238439577 + L1ME3A LINE L1 3958 4008 -2138 381 326 6 6 chr2 12248371 12248549 -238439305 + L1ME3A LINE L1 5773 5950 -220 317 303 53 86 chr2 12248816 12249060 -238438794 + MLT1L LTR MaLR 352 587 -28 264 301 24 49 chr2 12249602 12249725 -238438129 - MIR SINE MIR -100 162 43 488 187 22 22 chr2 12249787 12249926 -238437928 + CT-rich Low_complexity Low_complexity 2 140 0 555 204 95 7 chr2 12250482 12250629 -238437225 - MER5A DNA MER1_type -26 163 4 673 192 68 14 chr2 12250635 12250781 -238437073 + MER105 DNA DNA 49 202 -2 383 298 274 4 chr2 12250787 12251032 -238436822 + L2 LINE L2 2248 2558 -756 348 254 234 43 chr2 12251070 12251351 -238436503 + L2 LINE L2 2724 3036 -277 812 159 0 0 chr2 12251413 12251539 -238436315 - FLAM_C SINE Alu -7 136 11 505 278 63 10 chr2 12251550 12251755 -238436099 + L2 LINE L2 3098 3313 0 227 239 0 70 chr2 12252558 12252629 -238435225 - MIR3 SINE MIR -32 176 111 534 262 52 6 chr2 12253567 12253739 -238434115 + MLT1H LTR MaLR 1 180 -369 256 297 22 0 chr2 12253832 12253923 -238433931 + MER117 DNA MER1_type 5 97 -100 686 256 68 34 chr2 12254225 12254491 -238433363 + Charlie2b DNA MER1_type 5 279 -2503 290 311 107 0 chr2 12254527 12254630 -238433224 + Charlie2b DNA MER1_type 559 672 -2110 255 211 0 18 chr2 12254636 12254693 -238433161 + CT-rich Low_complexity Low_complexity 2 57 0 26 0 0 0 chr2 12254738 12254764 -238433090 + AT_rich Low_complexity Low_complexity 1 26 0 245 200 27 40 chr2 12254897 12254972 -238432882 + Charlie2b DNA MER1_type 2637 2710 -72 732 274 11 6 chr2 12254985 12255179 -238432675 + MLT1F LTR MaLR 1 244 -351 2110 132 3 3 chr2 12255909 12256213 -238431641 + AluSx SINE Alu 1 304 -8 192 311 28 5 chr2 12256582 12256657 -238431197 - MIR SINE MIR -110 98 19 1517 197 17 24 chr2 12256713 12257007 -238430847 - AluJo SINE Alu -20 292 1 212 289 157 0 chr2 12258072 12258193 -238429661 - MIR SINE MIR -12 250 111 615 324 57 5 chr2 12258444 12258654 -238429200 - MIR SINE MIR -37 225 5 1218 270 99 42 chr2 12258938 12259412 -238428442 + MLT1D LTR MaLR 5 505 0 1883 233 20 15 chr2 12259673 12260077 -238427777 - MLT2D LTR ERVL -8 406 1 180 287 58 35 chr2 12260868 12260955 -238426899 + MIR SINE MIR 26 114 -148 482 130 120 30 chr2 12260964 12261064 -238426790 - ORSL DNA AcHobo -8 267 159 38 96 0 0 chr2 12261081 12261196 -238426658 + AT_rich Low_complexity Low_complexity 1 115 0 267 220 0 17 chr2 12261245 12261304 -238426550 + MLT1B LTR MaLR 114 171 -219 321 254 100 23 chr2 12261337 12261467 -238426387 - ORSL DNA AcHobo -135 140 1 191 195 73 0 chr2 12261468 12261509 -238426345 + MIR3 SINE MIR 111 154 -54 287 313 65 52 chr2 12261646 12261876 -238425978 + MIR SINE MIR 17 249 -13 1722 207 41 34 chr2 12262206 12262593 -238425261 + MLT1B LTR MaLR 1 390 0 187 330 64 32 chr2 12263303 12263397 -238424457 + MIR SINE MIR 42 138 -70 222 287 104 96 chr2 12264100 12264330 -238423524 + L2 LINE L2 3040 3271 -1 753 267 95 4 chr2 12264786 12265018 -238422836 + MIR SINE MIR 10 262 0 334 338 40 26 chr2 12265629 12265780 -238422074 + MIR3 SINE MIR 39 191 -17 939 223 51 0 chr2 12265819 12266016 -238421838 + MER3 DNA MER1_type 3 209 0 267 348 26 19 chr2 12266298 12266453 -238421401 + L2 LINE L2 3158 3313 0 254 314 48 19 chr2 12266451 12266556 -238421298 - L2 LINE L2 -4 3268 3161 * 237 372 73 15 chr2 12266752 12266889 -238420965 + L2 LINE L2 3121 3265 -7 618 166 11 160 chr2 12266998 12267185 -238420669 + MLT1D LTR MaLR 8 166 -339 1178 198 23 163 chr2 12267286 12267721 -238420133 + MLT2D LTR ERVL 5 395 -19 352 136 39 19 chr2 12267722 12267825 -238420029 + (TCTA)n Simple_repeat Simple_repeat 3 107 0 1061 157 25 44 chr2 12267833 12268037 -238419817 + Tigger2 DNA MER2_type 11 210 -2508 824 163 34 7 chr2 12268036 12268183 -238419671 + Tigger2 DNA MER2_type 2554 2704 -14 * 373 109 0 0 chr2 12268187 12268242 -238419612 + MLT2C1 LTR ERVL 349 397 0 644 240 174 5 chr2 12268242 12268438 -238419416 + MLT1D LTR MaLR 277 505 0 204 40 0 0 chr2 12269093 12269118 -238418736 + (TTC)n Simple_repeat Simple_repeat 2 26 0 1487 194 37 7 chr2 12269123 12269396 -238418458 - AluJo SINE Alu -31 281 1 2332 154 19 26 chr2 12269566 12269995 -238417859 - MSTC LTR MaLR 0 428 3 489 350 25 10 chr2 12270003 12270206 -238417648 - MIR SINE MIR -18 244 39 202 118 29 0 chr2 12271183 12271217 -238416637 + CT-rich Low_complexity Low_complexity 5 39 0 1643 238 85 48 chr2 12271234 12271903 -238415951 - L1MD2 LINE L1 -13 6329 5636 774 295 116 34 chr2 12271907 12272588 -238415266 - L1MD2 LINE L1 -2639 3490 2754 858 210 49 10 chr2 12272597 12272802 -238415052 - L1MC/D LINE L1 -553 5689 5477 277 291 200 0 chr2 12273357 12273467 -238414387 - MER91A DNA MER1_type 0 196 65 713 277 90 93 chr2 12273968 12274073 -238413781 - L1MD2 LINE L1 -4882 1237 1133 2416 90 3 0 chr2 12274073 12274374 -238413480 - AluSg SINE Alu -8 302 1 713 277 90 93 chr2 12274374 12274386 -238413468 - L1MD2 LINE L1 -4986 1133 1122 2181 140 0 0 chr2 12274386 12274693 -238413161 - AluSx SINE Alu 0 312 6 713 277 90 93 chr2 12274693 12275227 -238412627 - L1MD2 LINE L1 -4997 1122 587 1036 83 0 0 chr2 12275292 12275424 -238412430 - AluY SINE Alu -17 294 163 358 388 65 4 chr2 12275445 12275677 -238412177 - L1MD2 LINE L1 -5721 398 153 1995 104 34 83 chr2 12276384 12276711 -238411143 - AluSq SINE Alu -2 311 1 834 138 26 0 chr2 12276711 12276863 -238410991 + MER50 LTR ERV1 566 721 -13 1827 126 41 0 chr2 12277041 12277347 -238410507 + AluSx SINE Alu 1 317 0 248 255 160 13 chr2 12277612 12277843 -238410011 - L1MEd LINE L1 -4887 1232 968 249 275 29 0 chr2 12278984 12279053 -238408801 - MIR SINE MIR -109 153 83 347 341 58 23 chr2 12280161 12280334 -238407520 - MIR3 SINE MIR -12 196 18 728 221 111 0 chr2 12280454 12280653 -238407201 + MER96B DNA MER1_type? 197 417 0 1011 197 26 22 chr2 12281404 12281673 -238406181 - MER58B DNA MER1_type -10 331 62 228 234 0 0 chr2 12281980 12282044 -238405810 + T-rich Low_complexity Low_complexity 1 64 0 408 71 0 0 chr2 12282713 12282769 -238405085 + (TG)n Simple_repeat Simple_repeat 2 57 0 230 292 56 0 chr2 12283338 12283410 -238404444 - MIR SINE MIR -28 234 159 257 200 18 0 chr2 12283422 12283477 -238404377 + MIR SINE MIR 13 68 -194 963 237 157 59 chr2 12283522 12283982 -238403872 + MLT1D LTR MaLR 1 505 0 340 267 0 0 chr2 12283982 12284068 -238403786 + MIR SINE MIR 163 248 -14 424 281 96 37 chr2 12284583 12285152 -238402702 + L1MEc LINE L1 1478 2085 -4874 600 185 29 6 chr2 12285238 12285411 -238402443 + GA-rich Low_complexity Low_complexity 2 178 0 203 213 0 21 chr2 12285454 12285501 -238402353 + A-rich Low_complexity Low_complexity 1 46 0 634 276 71 51 chr2 12285502 12285568 -238402286 + L1MEc LINE L1 2321 2384 -4754 2188 141 0 0 chr2 12285568 12285873 -238401981 + AluY SINE Alu 1 305 -6 634 276 71 51 chr2 12285873 12286296 -238401558 + L1MEc LINE L1 2384 2820 -4318 329 153 59 0 chr2 12286501 12286586 -238401268 + L1MEc LINE L1 3712 3801 -3156 2352 152 5 5 chr2 12286666 12287068 -238400786 - LOR1a LTR ERV1 -2 495 94 713 179 49 31 chr2 12287433 12287656 -238400198 - AluY SINE Alu -84 227 1 2184 97 14 3 chr2 12287685 12287975 -238399879 + AluY SINE Alu 1 293 -18 1855 238 99 34 chr2 12288002 12288590 -238399264 - MLT1E2 LTR MaLR 0 626 1 207 96 58 0 chr2 12289223 12289275 -238398579 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 227 352 48 38 chr2 12289757 12289862 -238397992 + MIR SINE MIR 80 185 -77 259 274 73 37 chr2 12291079 12291243 -238396611 + L1ME LINE L1 5406 5575 -546 216 0 0 0 chr2 12291490 12291514 -238396340 + (A)n Simple_repeat Simple_repeat 1 24 0 47 33 0 0 chr2 12291963 12292024 -238395830 + AT_rich Low_complexity Low_complexity 1 61 0 265 406 31 16 chr2 12292491 12292619 -238395235 - L2 LINE L2 -28 3244 3115 299 313 18 6 chr2 12293301 12293464 -238394390 + (TGAA)n Simple_repeat Simple_repeat 3 167 0 1706 125 0 99 chr2 12294081 12294385 -238393469 - AluSx SINE Alu -3 309 36 322 395 17 31 chr2 12295168 12295457 -238392397 + L3 LINE CR1 1267 1551 -26 26 0 0 0 chr2 12297174 12297200 -238390654 + AT_rich Low_complexity Low_complexity 1 26 0 530 216 0 97 chr2 12297871 12297999 -238389855 + MER5B DNA MER1_type 1 109 -69 2931 113 9 19 chr2 12297999 12298460 -238389394 - L1PA10 LINE L1 -4 6164 5709 530 216 0 97 chr2 12298460 12298507 -238389347 + MER5B DNA MER1_type 109 159 -19 200 406 100 29 chr2 12299379 12299660 -238388194 - L2 LINE L2 -31 3241 2941 269 293 24 67 chr2 12300101 12300265 -238387589 - L1MEd LINE L1 -5643 476 320 210 150 0 0 chr2 12300388 12300428 -238387426 + (CA)n Simple_repeat Simple_repeat 2 41 0 242 227 15 15 chr2 12300484 12300550 -238387304 - MLT1G1 LTR MaLR 0 595 530 2302 106 3 6 chr2 12301275 12301586 -238386268 + AluSx SINE Alu 1 310 -2 1079 248 95 47 chr2 12301755 12302198 -238385656 + MLT1L LTR MaLR 104 567 -48 41 0 0 0 chr2 12302827 12302868 -238384986 + AT_rich Low_complexity Low_complexity 1 41 0 223 236 9 28 chr2 12303094 12303200 -238384654 + A-rich Low_complexity Low_complexity 4 107 0 182 268 18 18 chr2 12303292 12303348 -238384506 + L2 LINE L2 2995 3050 -222 2578 45 0 7 chr2 12303407 12303716 -238384138 - AluY SINE Alu -4 307 1 1947 165 74 20 chr2 12303763 12304168 -238383686 - MSTA LTR MaLR -1 427 1 1119 197 23 40 chr2 12304246 12304718 -238383136 - pTR5 LTR ERV1 -1189 1249 741 955 236 25 0 chr2 12304801 12305004 -238382850 + MER58A DNA MER1_type 2 209 -15 3782 9 0 0 chr2 12305007 12305453 -238382401 + L1HS LINE L1 5710 6155 0 25 0 0 0 chr2 12305453 12305478 -238382376 + AT_rich Low_complexity Low_complexity 1 25 0 240 59 0 0 chr2 12305495 12305529 -238382325 + (A)n Simple_repeat Simple_repeat 1 34 0 251 404 0 34 chr2 12305573 12305719 -238382135 + L2 LINE L2 3084 3224 -48 451 320 26 7 chr2 12305767 12305920 -238381934 - MIR3 SINE MIR -38 170 15 211 376 64 18 chr2 12307302 12307411 -238380443 + L2 LINE L2 3118 3231 -41 303 274 36 0 chr2 12308610 12308694 -238379160 - MIR SINE MIR -122 140 54 304 191 0 0 chr2 12309152 12309199 -238378655 - L2 LINE L2 -21 3251 3205 351 330 16 69 chr2 12309338 12309542 -238378312 - MIR SINE MIR -45 217 18 314 273 78 23 chr2 12309716 12309844 -238378010 - L1ME4a LINE L1 -115 6006 5872 1701 218 76 44 chr2 12309846 12310396 -238377458 - MLT1E2 LTR MaLR -2 624 57 351 259 74 0 chr2 12310466 12310574 -238377280 - L2 LINE L2 -9 3304 3189 340 275 206 5 chr2 12310621 12310839 -238377015 - L1ME4a LINE L1 -299 5822 5561 22 0 0 0 chr2 12311258 12311280 -238376574 + AT_rich Low_complexity Low_complexity 1 22 0 239 276 0 0 chr2 12313170 12313228 -238374626 + (TG)n Simple_repeat Simple_repeat 1 58 0 610 311 27 32 chr2 12313913 12314132 -238373722 - MIR SINE MIR -19 243 26 324 0 0 0 chr2 12314185 12314221 -238373633 + (CA)n Simple_repeat Simple_repeat 2 37 0 227 244 23 12 chr2 12314704 12314790 -238373064 - L1 LINE L1 -1110 5036 4950 304 281 116 66 chr2 12314973 12315215 -238372639 - L1 LINE L1 -3228 2918 2665 191 36 36 0 chr2 12315610 12315638 -238372216 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1923 127 0 24 chr2 12315641 12315932 -238371922 - AluSx SINE Alu -28 284 1 1256 303 78 16 chr2 12315975 12317392 -238370462 - L1ME3 LINE L1 -81 6081 4570 367 310 92 15 chr2 12317406 12317677 -238370177 - L1ME3 LINE L1 -1749 4397 4106 307 279 109 57 chr2 12317981 12318228 -238369626 + L1ME4a LINE L1 5825 6084 -37 2088 122 3 3 chr2 12319508 12319804 -238368050 + AluSx SINE Alu 1 296 -16 1920 156 68 11 chr2 12319917 12320270 -238367584 - THE1C LTR MaLR -2 373 1 261 351 45 19 chr2 12320817 12320971 -238366883 - MIR SINE MIR -84 178 21 433 176 12 0 chr2 12321658 12321743 -238366111 - L1PA16 LINE L1 -5 6161 6076 243 235 17 9 chr2 12323423 12323538 -238364316 + CT-rich Low_complexity Low_complexity 1 116 0 24 77 0 0 chr2 12324312 12324364 -238363490 + AT_rich Low_complexity Low_complexity 1 52 0 1827 132 3 64 chr2 12325192 12325518 -238362336 - AluY SINE Alu -5 306 1 368 355 87 19 chr2 12328423 12328663 -238359191 + MIR SINE MIR 2 256 -6 393 22 0 0 chr2 12329258 12329304 -238358550 + (CA)n Simple_repeat Simple_repeat 1 46 0 191 181 14 0 chr2 12329310 12329382 -238358472 + CT-rich Low_complexity Low_complexity 2 74 0 1227 212 20 7 chr2 12329881 12330173 -238357681 - L1MA8 LINE L1 -2 6289 5994 202 265 29 29 chr2 12330214 12330282 -238357572 - L2 LINE L2 -25 3288 3221 543 238 126 7 chr2 12331507 12331650 -238356204 - MLT1J LTR MaLR -328 183 24 641 290 61 49 chr2 12331823 12332398 -238355456 + L1M4 LINE L1 3808 4389 -1757 23 0 0 0 chr2 12332665 12332688 -238355166 + AT_rich Low_complexity Low_complexity 1 23 0 2090 128 75 20 chr2 12332719 12333064 -238354790 + THE1B LTR MaLR 1 364 0 2970 123 0 19 chr2 12334181 12334567 -238353287 - L1PA15 LINE L1 -4 6161 5769 180 0 0 0 chr2 12334567 12334587 -238353267 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2093 93 11 0 chr2 12334587 12334865 -238352989 - AluY SINE Alu -30 281 1 2970 123 0 19 chr2 12334865 12334940 -238352914 - L1PA15 LINE L1 -394 5771 5708 602 303 95 36 chr2 12335026 12335578 -238352276 - L1MCa LINE L1 -5826 669 34 264 59 0 0 chr2 12336029 12336063 -238351791 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 215 361 76 13 chr2 12336130 12336288 -238351566 - MIR SINE MIR -64 198 31 258 237 17 0 chr2 12336823 12336882 -238350972 + L3 LINE CR1 1313 1372 -205 3321 236 44 29 chr2 12337015 12338345 -238349509 - L1M4c LINE L1 -4480 2166 817 264 222 0 0 chr2 12338345 12338417 -238349437 + A-rich Low_complexity Low_complexity 1 72 0 455 285 32 0 chr2 12338438 12338561 -238349293 - L1M4c LINE L1 -5804 738 612 1398 224 49 29 chr2 12338570 12338919 -238348935 + MLT1A1 LTR MaLR 10 365 0 292 339 66 19 chr2 12338929 12339186 -238348668 - L1M4c LINE L1 -5936 606 338 1826 179 39 18 chr2 12339645 12340028 -238347826 + MLT1B LTR MaLR 1 467 0 978 302 109 10 chr2 12340195 12340691 -238347163 + HAL1 LINE L1 202 746 -1761 345 247 0 0 chr2 12340694 12340771 -238347083 - MER105 DNA DNA -8 196 120 363 222 40 10 chr2 12340819 12340918 -238346936 - MER105 DNA DNA -98 106 5 1947 269 62 31 chr2 12340947 12341851 -238346003 + HAL1 LINE L1 788 1719 -788 24 32 0 0 chr2 12342018 12342049 -238345805 + AT_rich Low_complexity Low_complexity 1 31 0 181 309 55 0 chr2 12342132 12342187 -238345667 + MIR SINE MIR 73 130 -78 194 262 0 0 chr2 12342627 12342669 -238345185 + L2 LINE L2 3219 3260 -12 548 340 60 28 chr2 12343442 12343727 -238344127 - L3 LINE CR1 -48 1529 1236 283 250 42 14 chr2 12344540 12344612 -238343242 + MIR SINE MIR 21 94 -114 573 313 63 35 chr2 12345597 12345964 -238341890 + LTR33 LTR ERVL 90 466 -55 474 291 128 0 chr2 12346064 12346142 -238341712 + MIR SINE MIR 28 95 -167 523 75 12 12 chr2 12346142 12346222 -238341632 + MADE1 DNA Mariner 1 80 0 474 291 128 0 chr2 12346222 12346322 -238341532 + MIR SINE MIR 95 229 -33 204 320 51 13 chr2 12346989 12347067 -238340787 + MIR SINE MIR 80 160 -102 2131 116 3 7 chr2 12347185 12347479 -238340375 - AluSp SINE Alu -14 299 7 26 30 0 0 chr2 12347604 12347637 -238340217 + AT_rich Low_complexity Low_complexity 1 33 0 452 264 74 7 chr2 12347748 12347896 -238339958 - MIR SINE MIR -15 247 90 1744 179 72 19 chr2 12347901 12348295 -238339559 + MLT1D LTR MaLR 6 503 -2 270 309 0 100 chr2 12348297 12348407 -238339447 - MIR SINE MIR -155 107 9 1055 235 129 62 chr2 12348530 12348991 -238338863 + MLT1H LTR MaLR 14 547 -2 447 311 87 13 chr2 12349147 12349356 -238338498 - MIR SINE MIR -31 231 12 2404 114 17 3 chr2 12350088 12350438 -238337416 - THE1A LTR MaLR 0 355 1 11139 101 23 1 chr2 12350438 12351985 -238335869 - THE1A-int LTR MaLR 0 1580 1 479 196 74 12 chr2 12352195 12352313 -238335541 + MER20B DNA MER1_type 36 159 -60 5208 209 65 41 chr2 12352400 12353744 -238334110 + L1MC3 LINE L1 5530 6912 -873 1789 155 0 31 chr2 12353744 12354063 -238333791 + AluSx SINE Alu 1 310 0 5208 209 65 41 chr2 12354063 12354136 -238333718 + L1MC3 LINE L1 6912 6982 -803 29 60 0 0 chr2 12354169 12354219 -238333635 + AT_rich Low_complexity Low_complexity 1 50 0 311 183 24 24 chr2 12354267 12354349 -238333505 + L1MC3 LINE L1 7014 7095 -690 281 237 32 32 chr2 12354349 12354442 -238333412 + MLT1F1 LTR MaLR 33 125 -442 1384 191 28 7 chr2 12354448 12354882 -238332972 + L1MC3 LINE L1 7197 7757 -28 207 0 0 0 chr2 12354882 12354905 -238332949 + (TC)n Simple_repeat Simple_repeat 2 24 0 275 229 24 0 chr2 12354905 12354988 -238332866 - L1MC4 LINE L1 -1341 6701 6617 1163 279 53 36 chr2 12355159 12355721 -238332133 + MER20B DNA MER1_type 211 782 -1 337 347 90 0 chr2 12355937 12356159 -238331695 + MLT1J2 LTR MaLR 209 450 0 259 333 101 12 chr2 12356161 12356329 -238331525 + MIR SINE MIR 56 238 -24 198 0 0 0 chr2 12357968 12357990 -238329864 + (TGAA)n Simple_repeat Simple_repeat 2 23 0 191 337 54 22 chr2 12358809 12358901 -238328953 + L2 LINE L2 3171 3265 -7 1367 217 39 22 chr2 12359230 12359589 -238328265 - MLT1A1 LTR MaLR 0 365 1 240 272 0 86 chr2 12360249 12360330 -238327524 + MIR SINE MIR 67 140 -68 1810 169 46 25 chr2 12360758 12361125 -238326729 + THE1C LTR MaLR 1 375 0 298 267 112 0 chr2 12361960 12362076 -238325778 + L3 LINE CR1 1289 1417 -160 300 308 33 0 chr2 12362349 12362440 -238325414 + L2 LINE L2 2264 2357 -957 598 221 55 0 chr2 12362443 12362570 -238325284 + L1PB4 LINE L1 6022 6155 -1 191 36 36 0 chr2 12362573 12362601 -238325253 + (GA)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr2 12363107 12363133 -238324721 + (TG)n Simple_repeat Simple_repeat 1 26 0 23 68 0 0 chr2 12363213 12363257 -238324597 + AT_rich Low_complexity Low_complexity 1 44 0 1201 259 84 30 chr2 12363765 12364285 -238323569 + MLT1E LTR MaLR 1 593 0 493 283 28 14 chr2 12364979 12365104 -238322750 - L2 LINE L2 -5 3308 3179 2060 127 34 45 chr2 12365104 12365483 -238322371 - THE1C LTR MaLR 0 375 1 493 283 28 14 chr2 12365483 12365502 -238322352 - L2 LINE L2 -134 3179 3162 732 276 44 27 chr2 12366743 12367036 -238320818 - MER20B DNA MER1_type -288 495 198 2258 61 20 20 chr2 12367231 12367528 -238320326 - AluY SINE Alu -14 297 1 27 49 0 0 chr2 12367607 12367648 -238320206 + AT_rich Low_complexity Low_complexity 1 41 0 1418 222 11 3 chr2 12367648 12367932 -238319922 - AluJo SINE Alu -16 286 1 1213 93 114 41 chr2 12367937 12368183 -238319671 - L1MA8 LINE L1 -3 6288 6025 14264 143 17 8 chr2 12368506 12370902 -238316952 + Tigger1 DNA MER2_type 1 2417 -1 1367 132 30 8 chr2 12371122 12371357 -238316497 - L1MA9 LINE L1 -1 6311 6072 1165 313 79 34 chr2 12371837 12371894 -238315960 - LTR16C LTR ERVL 0 491 438 1552 195 45 25 chr2 12371894 12372248 -238315606 - MLT1A1 LTR MaLR 0 365 5 1165 313 79 34 chr2 12372248 12372659 -238315195 - LTR16C LTR ERVL -53 438 2 25 31 0 0 chr2 12374260 12374292 -238313562 + AT_rich Low_complexity Low_complexity 1 32 0 352 306 47 12 chr2 12374541 12374711 -238313143 + MIR SINE MIR 79 254 -8 234 341 0 11 chr2 12374717 12374805 -238313049 + CT-rich Low_complexity Low_complexity 1 87 0 1934 93 0 8 chr2 12374838 12375107 -238312747 + AluSc SINE Alu 37 303 0 206 347 112 0 chr2 12375143 12375241 -238312613 - L2 LINE L2 -12 3301 3193 * 209 355 73 0 chr2 12375208 12375332 -238312522 + MIR SINE MIR 95 227 -35 261 163 0 0 chr2 12375725 12375774 -238312080 + (TG)n Simple_repeat Simple_repeat 2 50 0 725 133 0 0 chr2 12376102 12376207 -238311647 - MSTA LTR MaLR -323 105 1 260 173 0 0 chr2 12376757 12376809 -238311045 + L1MC4 LINE L1 6652 6703 -1339 327 164 0 0 chr2 12376809 12376870 -238310984 + (CATA)n Simple_repeat Simple_repeat 4 64 0 201 341 0 0 chr2 12376884 12376966 -238310888 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 552 309 106 29 chr2 12377013 12377427 -238310427 - MLT1J1 LTR MaLR 0 446 1 1510 156 66 43 chr2 12377693 12377994 -238309860 + AluSg SINE Alu 1 308 -2 25 31 0 0 chr2 12379040 12379072 -238308782 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 12379540 12379561 -238308293 + AT_rich Low_complexity Low_complexity 1 21 0 269 358 16 16 chr2 12379902 12380025 -238307829 - L2 LINE L2 -554 2760 2638 209 198 210 25 chr2 12382268 12382349 -238305505 - MIR SINE MIR -70 138 43 190 270 34 67 chr2 12382384 12382473 -238305381 - L2 LINE L2 -8 3264 3179 315 154 10 48 chr2 12383261 12383365 -238304489 + A-rich Low_complexity Low_complexity 1 100 0 321 281 7 44 chr2 12383379 12383514 -238304340 + L2 LINE L2 2829 2958 -355 332 273 18 92 chr2 12383537 12383764 -238304090 + L2 LINE L2 3077 3286 -27 346 321 25 56 chr2 12384221 12384417 -238303437 + MIR3 SINE MIR 13 202 -6 198 0 0 0 chr2 12385692 12385714 -238302140 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 181 306 97 45 chr2 12386357 12386491 -238301363 - MIR SINE MIR -113 149 9 318 253 0 0 chr2 12387370 12387445 -238300409 + L1MC4 LINE L1 6629 6703 -1339 272 200 14 0 chr2 12387536 12387606 -238300248 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 382 313 67 0 chr2 12388224 12388358 -238299496 + MIR SINE MIR 103 245 -17 221 146 21 0 chr2 12388371 12388419 -238299435 + (CA)n Simple_repeat Simple_repeat 1 49 0 207 0 0 0 chr2 12388712 12388735 -238299119 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 5439 149 8 42 chr2 12389156 12389888 -238297966 - L1MA4A LINE L1 -14 6289 5603 1914 126 3 50 chr2 12389888 12390205 -238297649 + AluSx SINE Alu 9 310 -2 5439 149 8 42 chr2 12390205 12390544 -238297310 - L1MA4A LINE L1 -700 5603 5254 265 274 12 24 chr2 12390643 12390727 -238297127 + MLT1L LTR MaLR 3 85 -530 306 284 55 0 chr2 12391302 12391429 -238296425 - MIR SINE MIR -56 206 73 321 336 36 14 chr2 12391498 12391769 -238296085 + L2 LINE L2 2766 3083 -189 193 364 34 11 chr2 12391852 12391940 -238295914 + MER5A DNA MER1_type 82 171 -18 485 301 38 25 chr2 12394086 12394569 -238293285 + L1MCc LINE L1 652 1301 -5125 374 261 87 26 chr2 12394580 12394756 -238293098 + L1MCc LINE L1 1345 1677 -4930 225 297 65 13 chr2 12394756 12394911 -238292943 + L1MCa LINE L1 1464 1626 -4800 14932 154 33 15 chr2 12394975 12397644 -238290210 + Tigger2 DNA MER2_type 1 2718 0 198 236 0 0 chr2 12397705 12397760 -238290094 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 418 269 83 19 chr2 12397771 12397987 -238289867 + L1ME2 LINE L1 5254 5483 -679 379 312 19 26 chr2 12397991 12398145 -238289709 + LTR52 LTR ERVL 132 284 -137 1790 254 62 29 chr2 12398171 12398856 -238288998 + L1ME2 LINE L1 5442 6157 -7 788 232 121 10 chr2 12400151 12400349 -238287505 - MER58A DNA MER1_type -2 222 3 185 341 57 0 chr2 12400912 12401000 -238286854 + L2 LINE L2 2307 2399 -915 468 223 14 93 chr2 12401275 12401362 -238286492 + MLT1H LTR MaLR 53 127 -422 2075 106 0 48 chr2 12401362 12401673 -238286181 - AluSx SINE Alu -12 300 5 468 223 14 93 chr2 12401673 12401724 -238286130 + MLT1H LTR MaLR 127 180 -369 468 173 15 25 chr2 12401724 12401920 -238285934 + GA-rich Low_complexity Low_complexity 1 194 0 1354 197 27 17 chr2 12402075 12402370 -238285484 - AluJo SINE Alu 0 312 15 22 0 0 0 chr2 12402992 12403014 -238284840 + AT_rich Low_complexity Low_complexity 1 22 0 237 338 119 6 chr2 12403296 12403456 -238284398 - MIR SINE MIR 0 262 85 1115 185 49 131 chr2 12404727 12405122 -238282732 - MLT1A1 LTR MaLR -1 456 1 181 280 80 0 chr2 12405512 12405562 -238282292 - MIR SINE MIR -64 144 91 2014 137 0 35 chr2 12405780 12406095 -238281759 + AluSx SINE Alu 1 304 -8 378 101 0 17 chr2 12406114 12406181 -238281673 - AluSp SINE Alu -9 293 242 461 103 0 134 chr2 12406181 12406278 -238281576 - AluSp SINE Alu -160 153 70 272 321 141 21 chr2 12406975 12407265 -238280589 - L2 LINE L2 -675 2639 2315 337 211 43 31 chr2 12407342 12407503 -238280351 + (TA)n Simple_repeat Simple_repeat 2 164 0 264 66 50 94 chr2 12407608 12407789 -238280065 + (TATAA)n Simple_repeat Simple_repeat 4 176 0 434 79 92 6 chr2 12408248 12408412 -238279442 + (TA)n Simple_repeat Simple_repeat 2 179 0 61 15 0 0 chr2 12408412 12408480 -238279374 + AT_rich Low_complexity Low_complexity 1 68 0 2003 269 93 55 chr2 12409115 12411300 -238276554 + L1ME3 LINE L1 2925 5201 -945 2464 69 3 0 chr2 12411300 12411603 -238276251 + AluY SINE Alu 1 304 -7 2003 269 93 55 chr2 12411603 12411676 -238276178 + L1ME3 LINE L1 5201 5270 -876 180 245 0 0 chr2 12411687 12411740 -238276114 + (TA)n Simple_repeat Simple_repeat 1 53 0 27 29 0 0 chr2 12411756 12411790 -238276064 + AT_rich Low_complexity Low_complexity 1 34 0 1302 261 125 39 chr2 12411842 12412597 -238275257 + L1ME3 LINE L1 5267 6100 -70 995 90 0 0 chr2 12412597 12412731 -238275123 + L1PA10 LINE L1 6031 6164 -4 1302 261 125 39 chr2 12412731 12412801 -238275053 + L1ME3 LINE L1 6100 6163 -7 195 328 103 46 chr2 12412806 12413135 -238274719 - L2 LINE L2 -1300 2014 1667 389 52 0 52 chr2 12413159 12413217 -238274637 - MLT2A1 LTR ERVL 0 453 399 224 233 0 0 chr2 12413233 12413276 -238274578 + (CATATA)n Simple_repeat Simple_repeat 2 44 0 2473 93 77 8 chr2 12413277 12413653 -238274201 - MLT2A1 LTR ERVL -40 404 3 58 13 0 13 chr2 12414967 12414992 -238272862 + AT_rich Low_complexity Low_complexity 1 25 -50 2024 122 7 3 chr2 12414992 12415280 -238272574 + AluSp SINE Alu 1 289 -24 58 13 0 13 chr2 12415280 12415330 -238272524 + AT_rich Low_complexity Low_complexity 25 75 0 294 318 95 0 chr2 12416108 12416234 -238271620 + MIR SINE MIR 49 186 -76 426 235 29 0 chr2 12416774 12416876 -238270978 - L1MB8 LINE L1 -200 5978 5874 2566 231 45 6 chr2 12416905 12417602 -238270252 - L1MB8 LINE L1 -1049 5097 4374 24296 178 17 23 chr2 12417602 12418717 -238269137 + L1PA12 LINE L1 8 1129 -6440 183 42 0 0 chr2 12418717 12418741 -238269113 + (CAA)n Simple_repeat Simple_repeat 1 24 0 24296 178 17 23 chr2 12418741 12419705 -238268149 + L1PA12 LINE L1 1129 2098 -5471 2357 93 7 0 chr2 12419705 12420006 -238267848 - AluSq SINE Alu -4 309 7 24296 178 17 23 chr2 12420006 12421807 -238266047 + L1PA12 LINE L1 2098 3909 -3660 207 0 0 0 chr2 12421807 12421830 -238266024 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 24296 178 17 23 chr2 12421830 12423788 -238264066 + L1PA12 LINE L1 3909 7112 -457 307 255 168 37 chr2 12424780 12424941 -238262913 + MIR SINE MIR 49 230 -32 1911 154 3 3 chr2 12425169 12425461 -238262393 + AluSx SINE Alu 8 299 -13 350 321 64 32 chr2 12426443 12426575 -238261279 + L1ME3 LINE L1 3718 3844 -2302 2063 159 27 30 chr2 12426575 12426940 -238260914 - THE1B LTR MaLR 0 364 1 350 321 64 32 chr2 12426940 12427215 -238260639 + L1ME3 LINE L1 3844 4138 -2008 21 0 0 0 chr2 12427218 12427239 -238260615 + AT_rich Low_complexity Low_complexity 1 21 0 488 310 125 53 chr2 12427276 12427957 -238259897 + L1ME3 LINE L1 4205 4964 -1182 414 0 0 0 chr2 12427961 12428007 -238259847 + (CA)n Simple_repeat Simple_repeat 2 47 0 319 291 119 64 chr2 12428010 12428337 -238259517 + L1ME3 LINE L1 5002 5346 -800 394 264 53 120 chr2 12428363 12428871 -238258983 + L1ME3 LINE L1 5381 5854 -308 2296 86 0 0 chr2 12429284 12429574 -238258280 - AluSc SINE Alu -19 290 1 1097 235 87 26 chr2 12431062 12431522 -238256332 - Charlie2 DNA MER1_type -47 2815 2328 664 222 79 0 chr2 12431708 12431924 -238255930 - Charlie2a DNA MER1_type -1851 1011 779 283 91 400 0 chr2 12431927 12431982 -238255872 - MADE1 DNA Mariner -3 77 1 2182 132 83 5 chr2 12432050 12432436 -238255418 + MSTA LTR MaLR 1 416 -12 359 256 16 31 chr2 12432448 12432577 -238255277 - Charlie2a DNA MER1_type -2271 591 465 732 112 0 0 chr2 12433090 12433197 -238254657 + AluSg SINE Alu 1 107 -203 2330 95 0 0 chr2 12433214 12433520 -238254334 + AluY SINE Alu 1 306 -5 221 298 87 19 chr2 12433694 12433798 -238254056 - L2 LINE L2 -41 3231 3121 274 313 0 26 chr2 12435374 12435509 -238252345 + MIR3 SINE MIR 3 176 -32 22 0 0 0 chr2 12435597 12435619 -238252235 + AT_rich Low_complexity Low_complexity 1 22 0 336 303 35 35 chr2 12435772 12435917 -238251937 - L2 LINE L2 -1 3312 3168 1631 214 70 20 chr2 12436119 12436559 -238251295 - MLT1C LTR MaLR 0 467 6 322 278 76 49 chr2 12437694 12437838 -238250016 - MER91A DNA MER1_type -29 167 20 271 296 134 0 chr2 12438113 12438255 -238249599 + MIR SINE MIR 48 208 -54 2527 68 0 0 chr2 12438746 12439070 -238248784 + L1PA5 LINE L1 5831 6154 0 2141 199 83 6 chr2 12439846 12440338 -238247516 + L1MD2 LINE L1 5428 5957 -402 7215 170 38 6 chr2 12440384 12442782 -238245072 - L1MA4 LINE L1 -11 6289 3811 186 43 0 0 chr2 12493577 12493600 -238194254 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 302 167 0 0 chr2 12493604 12493658 -238194196 - L1MA6 LINE L1 -13 6287 6234 3483 213 21 18 chr2 12493660 12494684 -238193170 - L1MA6 LINE L1 -248 6052 5017 * 5178 144 53 19 chr2 12494681 12495597 -238192257 - THE1C-int LTR MaLR -632 948 1 1363 145 84 95 chr2 12495597 12495976 -238191878 - THE1C LTR MaLR 0 375 1 1736 278 44 29 chr2 12495976 12496494 -238191360 - L1M3b LINE L1 -5755 526 1 2056 126 48 28 chr2 12496588 12496945 -238190909 + THE1B LTR MaLR 1 364 0 21 82 0 0 chr2 12497049 12497098 -238190756 + AT_rich Low_complexity Low_complexity 1 49 0 1200 214 58 79 chr2 12497280 12497462 -238190392 - MLT1A2 LTR MaLR 0 374 190 366 23 0 0 chr2 12497462 12497505 -238190349 + (TG)n Simple_repeat Simple_repeat 1 43 0 1200 214 58 79 chr2 12497505 12497700 -238190154 - MLT1A2 LTR MaLR -184 190 5 2290 229 4 17 chr2 12498178 12498654 -238189200 - MER70A LTR ERVL -2 470 1 187 273 189 38 chr2 12499200 12499332 -238188522 + MIR3 SINE MIR 42 193 -15 216 250 18 0 chr2 12499652 12499708 -238188146 + (CACCC)n Simple_repeat Simple_repeat 1 57 0 183 314 86 71 chr2 12499751 12499961 -238187893 + MIR SINE MIR 50 262 0 256 145 16 16 chr2 12501316 12501378 -238186476 + (TA)n Simple_repeat Simple_repeat 2 63 0 304 297 75 82 chr2 12501409 12502052 -238185802 - L1MC/D LINE L1 -470 5651 5266 1330 181 140 16 chr2 12502377 12502742 -238185112 + MER65A LTR ERV1 23 432 -13 596 337 70 22 chr2 12502783 12503338 -238184516 - L1MC/D LINE L1 -1249 4897 4316 735 226 132 116 chr2 12504183 12504699 -238183155 + MLT1F1 LTR MaLR 3 567 0 663 296 47 19 chr2 12505156 12505369 -238182485 + MER58A DNA MER1_type 4 222 -2 362 343 63 38 chr2 12505705 12506020 -238181834 - MLT1H LTR MaLR -198 351 29 2200 143 19 11 chr2 12507389 12507761 -238180093 + THE1C LTR MaLR 1 375 0 332 317 41 0 chr2 12508067 12508190 -238179664 - MIR SINE MIR -48 214 87 938 244 15 29 chr2 12508595 12508869 -238178985 - MLT1C LTR MaLR -194 273 4 185 388 0 15 chr2 12508901 12508968 -238178886 + L3b LINE CR1 1501 1566 -17 249 83 0 0 chr2 12509349 12509385 -238178469 + (TG)n Simple_repeat Simple_repeat 2 37 0 263 390 94 0 chr2 12509811 12509970 -238177884 - MIR SINE MIR -44 218 45 396 40 0 0 chr2 12510069 12510119 -238177735 + (TG)n Simple_repeat Simple_repeat 1 50 0 791 263 87 76 chr2 12510436 12510941 -238176913 - MLT2B3 LTR ERVL -20 534 21 1312 246 25 17 chr2 12510941 12511303 -238176551 + MLT1A1 LTR MaLR 1 365 0 791 263 87 76 chr2 12511303 12511325 -238176529 - MLT2B3 LTR ERVL -533 21 1 425 248 55 0 chr2 12513010 12513119 -238174735 + MIR SINE MIR 89 203 -59 407 76 51 38 chr2 12513119 12513198 -238174656 + L1MB7 LINE L1 6104 6183 -1 180 0 0 0 chr2 12513893 12513913 -238173941 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2327 67 0 7 chr2 12514485 12514802 -238173052 + AluY SINE Alu 3 311 0 236 336 69 0 chr2 12514887 12515018 -238172836 - MIR SINE MIR -42 220 81 199 166 178 0 chr2 12515276 12515332 -238172522 - MIR SINE MIR -65 143 84 333 82 0 0 chr2 12515431 12515480 -238172374 + (TATAG)n Simple_repeat Simple_repeat 2 50 0 1120 300 58 33 chr2 12516155 12516851 -238171003 + HAL1 LINE L1 1482 2194 -313 316 216 5 146 chr2 12516852 12517037 -238170817 + HAL1 LINE L1 2324 2482 -25 26 64 0 0 chr2 12518267 12518314 -238169540 + AT_rich Low_complexity Low_complexity 1 47 0 180 323 20 50 chr2 12518644 12518743 -238169111 - MIR SINE MIR -92 116 21 1337 228 0 0 chr2 12518926 12519194 -238168660 + MLT1A1 LTR MaLR 1 268 -97 4328 82 39 3 chr2 12519505 12520129 -238167725 - L1P LINE L1 -1726 4420 3775 187 306 97 0 chr2 12520292 12520354 -238167500 - L2 LINE L2 -89 3183 3116 1805 156 26 0 chr2 12520362 12520664 -238167190 + AluSx SINE Alu 1 310 -2 700 198 0 11 chr2 12520992 12521174 -238166680 + GA-rich Low_complexity Low_complexity 1 180 0 266 333 68 14 chr2 12524872 12525094 -238162760 + L1ME LINE L1 4553 4786 -1360 1872 155 137 11 chr2 12525277 12525657 -238162197 + MSTA LTR MaLR 1 428 0 8619 156 16 36 chr2 12525659 12527266 -238160588 + MSTA-int LTR MaLR 3 1576 -4 1976 146 125 18 chr2 12527270 12527655 -238160199 + MSTA LTR MaLR 1 426 -2 2513 181 42 9 chr2 12527743 12528284 -238159570 - L1PB4 LINE L1 0 6156 5598 378 372 41 11 chr2 12528402 12528770 -238159084 + L1ME LINE L1 5258 5636 -526 451 366 71 17 chr2 12528805 12529100 -238158754 - L2 LINE L2 -8 3305 2995 826 300 63 101 chr2 12529138 12530024 -238157830 - L2 LINE L2 -420 2894 2042 31 88 0 0 chr2 12530502 12530582 -238157272 + AT_rich Low_complexity Low_complexity 1 80 0 2215 198 15 22 chr2 12530735 12531195 -238156659 + MSTB2 LTR MaLR 1 457 0 2488 205 71 79 chr2 12531195 12531969 -238155885 + MSTB2-int LTR MaLR 2 769 -882 1028 208 0 0 chr2 12531969 12532166 -238155688 + MLT1A1 LTR MaLR 261 457 0 229 320 95 0 chr2 12532391 12532538 -238155316 + L1ME LINE L1 5651 5811 -310 40 37 0 0 chr2 12532592 12532646 -238155208 + AT_rich Low_complexity Low_complexity 1 54 0 840 182 72 8 chr2 12533219 12533455 -238154399 - MER33 DNA MER1_type -19 305 55 1621 189 34 10 chr2 12533523 12533820 -238154034 - AluJb SINE Alu -8 304 1 264 235 44 81 chr2 12533821 12533957 -238153897 - MER104 DNA Tc2 -42 138 8 342 333 60 51 chr2 12534159 12534393 -238153461 - MLT1K LTR MaLR -234 354 119 326 279 0 74 chr2 12536251 12536373 -238151481 + MER74B LTR ERVL 70 182 -440 272 24 0 48 chr2 12536381 12536423 -238151431 + (TTA)n Simple_repeat Simple_repeat 3 42 0 7016 40 0 11 chr2 12536423 12537284 -238150570 - L1PA5 LINE L1 -18 6136 5285 366 285 44 44 chr2 12537287 12537424 -238150430 + MER74B LTR ERVL 380 516 -106 25 0 0 0 chr2 12537576 12537601 -238150253 + AT_rich Low_complexity Low_complexity 1 25 0 297 241 46 11 chr2 12537874 12537961 -238149893 + MLT1J2 LTR MaLR 66 155 -295 1690 252 65 55 chr2 12538166 12539109 -238148745 - L1MC5 LINE L1 -55 7906 6955 1529 246 56 27 chr2 12539318 12539797 -238148057 - L1MC5 LINE L1 -2007 5801 5309 28 29 0 0 chr2 12540188 12540223 -238147631 + AT_rich Low_complexity Low_complexity 1 35 0 2132 183 44 12 chr2 12541334 12541739 -238146115 - MER47B DNA MER2_type 0 418 1 2626 38 0 10 chr2 12542127 12542441 -238145413 - AluY SINE Alu 0 311 1 29 28 0 0 chr2 12542441 12542477 -238145377 + AT_rich Low_complexity Low_complexity 1 36 0 387 231 56 50 chr2 12542530 12542690 -238145164 - L1MC5 LINE L1 -1465 4681 4521 277 276 172 5 chr2 12542781 12542984 -238144870 + L1M4 LINE L1 3515 3751 -2395 593 156 0 0 chr2 12542984 12543074 -238144780 + 7SLRNA srpRNA srpRNA 213 302 -18 198 0 0 0 chr2 12543074 12543096 -238144758 + (TAA)n Simple_repeat Simple_repeat 2 23 0 271 261 93 35 chr2 12543104 12543414 -238144440 + L1M4 LINE L1 3760 4087 -2059 745 249 31 55 chr2 12543442 12543823 -238144031 + L1M4 LINE L1 4222 4593 -1553 191 233 23 0 chr2 12544628 12544671 -238143183 + MER5A DNA MER1_type 111 154 -35 23 33 0 0 chr2 12544671 12544701 -238143153 + AT_rich Low_complexity Low_complexity 1 30 0 269 321 42 71 chr2 12545191 12545359 -238142495 - MIR3 SINE MIR -43 165 3 186 43 0 0 chr2 12545648 12545671 -238142183 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 428 135 34 0 chr2 12545674 12545763 -238142091 - L1MA7 LINE L1 -2 6289 6198 411 83 0 0 chr2 12546399 12546459 -238141395 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 619 337 108 28 chr2 12546459 12547589 -238140265 + L1ME3A LINE L1 4143 5392 -770 2207 120 0 0 chr2 12547589 12547889 -238139965 - AluSq SINE Alu -13 300 1 619 337 108 28 chr2 12547889 12547986 -238139868 + L1ME3A LINE L1 5392 5480 -682 245 353 73 10 chr2 12548156 12548445 -238139409 + L1ME3A LINE L1 5645 5951 -219 180 0 0 0 chr2 12550256 12550276 -238137578 + (TTAA)n Simple_repeat Simple_repeat 4 23 0 772 293 67 62 chr2 12550305 12550906 -238136948 - L2 LINE L2 0 3313 2723 180 174 0 87 chr2 12551517 12551563 -238136291 - MIR SINE MIR -10 252 211 1395 201 119 49 chr2 12553310 12553782 -238134072 - MLT1D LTR MaLR 0 505 1 435 282 28 93 chr2 12554171 12554462 -238133392 - L2 LINE L2 -79 3234 2963 230 288 76 30 chr2 12555485 12555551 -238132303 + L2 LINE L2 3197 3265 -48 313 350 21 21 chr2 12556090 12556233 -238131621 - MIR SINE MIR -100 162 20 204 260 57 8 chr2 12556760 12556852 -238131002 - MIR SINE MIR -62 146 52 2148 109 20 0 chr2 12557099 12557403 -238130451 + AluSp SINE Alu 1 310 -3 301 369 95 5 chr2 12557666 12557888 -238129966 + MIR SINE MIR 6 247 -15 289 351 16 16 chr2 12558081 12558323 -238129531 + L1MEc LINE L1 36 277 -6119 1955 125 4 0 chr2 12558724 12558996 -238128858 + AluSx SINE Alu 3 275 -37 235 0 0 54 chr2 12559000 12559037 -238128817 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 479 234 24 102 chr2 12559222 12559556 -238128298 + L1MEc LINE L1 825 1132 -5073 1331 150 87 113 chr2 12559777 12560237 -238127617 - LTR7 LTR ERV1 -2 448 1 2362 95 48 13 chr2 12560237 12560616 -238127238 - HERVH LTR ERV1 0 7713 7322 1391 123 18 14 chr2 12560614 12560833 -238127021 - HERVH LTR ERV1 -1894 5819 5600 * 2422 143 38 0 chr2 12560834 12561227 -238126627 - HERVH LTR ERV1 -2564 5149 4742 1138 137 16 0 chr2 12561276 12561466 -238126388 - HERVH LTR ERV1 -4726 2987 2795 * 1685 100 59 0 chr2 12561464 12561703 -238126151 - HERVH LTR ERV1 -2973 4740 4488 3239 122 8 6 chr2 12561705 12562206 -238125648 - HERVH LTR ERV1 -3720 3993 3492 947 133 7 0 chr2 12562196 12562346 -238125508 - HERVH LTR ERV1 -4423 3290 3140 * 19960 102 21 5 chr2 12562340 12565280 -238122574 - HERVH LTR ERV1 -4726 2987 1 1272 145 95 124 chr2 12565282 12565743 -238122111 - LTR7 LTR ERV1 -2 448 1 233 0 62 0 chr2 12566413 12566445 -238121409 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1395 244 7 3 chr2 12566728 12567023 -238120831 + MLT2B1 LTR ERVL 1 296 -224 193 236 214 22 chr2 12567105 12567194 -238120660 - MIR SINE MIR -85 177 72 4032 297 78 49 chr2 12568528 12570351 -238117503 - L1ME2 LINE L1 -304 6655 4887 252 100 183 0 chr2 12570351 12570411 -238117443 + LTR52 LTR ERVL 19 89 -332 4032 297 78 49 chr2 12570411 12571240 -238116614 - L1ME2 LINE L1 -2072 4887 4084 2110 210 92 76 chr2 12571240 12572053 -238115801 - LTR1B LTR ERV1 0 826 1 4032 297 78 49 chr2 12572053 12572528 -238115326 - L1ME2 LINE L1 -2875 4084 3624 1799 161 58 19 chr2 12572528 12572889 -238114965 - THE1C LTR MaLR 0 375 1 9126 131 38 40 chr2 12572889 12574472 -238113382 - THE1C-int LTR MaLR 0 1580 2 1893 140 80 11 chr2 12574473 12574824 -238113030 - THE1C LTR MaLR 0 375 1 4032 297 78 49 chr2 12574824 12575187 -238112667 - L1ME2 LINE L1 -3334 3625 2998 927 279 49 21 chr2 12575188 12575615 -238112239 - L1ME2 LINE L1 -4125 2997 2559 320 218 50 30 chr2 12575797 12575898 -238111956 - L1ME2 LINE L1 -5159 1264 1162 624 342 47 4 chr2 12576542 12576776 -238111078 - HERVL40 LTR ERVL -1738 3792 3549 424 303 60 60 chr2 12578020 12578334 -238109520 - REP3 LTR ERV -54 508 195 1303 271 86 14 chr2 12578789 12579287 -238108567 - MLT1E1 LTR MaLR -114 540 7 318 298 19 10 chr2 12579699 12579803 -238108051 + MIR3 SINE MIR 89 193 -15 339 360 30 35 chr2 12580686 12580886 -238106968 + MIR SINE MIR 49 247 -15 229 286 21 83 chr2 12580979 12581171 -238106683 - REP3 LTR ERV -218 344 165 643 345 84 35 chr2 12582465 12583169 -238104685 + HAL1b LINE L1 62 799 -549 261 392 40 8 chr2 12583403 12583528 -238104326 + MER5A DNA MER1_type 52 180 -9 833 231 0 0 chr2 12584132 12584292 -238103562 + AluJb SINE Alu 129 288 -24 999 203 5 15 chr2 12585408 12585610 -238102244 - AluJo SINE Alu -19 293 94 201 311 58 29 chr2 12586690 12586793 -238101061 - L2 LINE L2 -160 3112 3007 366 42 0 0 chr2 12586861 12586909 -238100945 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1355 48 0 0 chr2 12586921 12587088 -238100766 - L1PA4 LINE L1 -8 6147 5981 428 245 20 10 chr2 12587131 12587229 -238100625 - MER81 DNA DNA -1 113 15 734 232 80 77 chr2 12587258 12587620 -238100234 - MLT1F1 LTR MaLR -140 427 65 1793 155 3 23 chr2 12587850 12588153 -238099701 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr2 12588308 12588330 -238099524 + AT_rich Low_complexity Low_complexity 1 22 0 1206 186 122 32 chr2 12588749 12589060 -238098794 - MER44D DNA MER2_type 0 609 1 590 243 59 76 chr2 12589265 12589602 -238098252 + MER57A LTR ERV1 103 403 0 244 300 0 0 chr2 12589932 12590002 -238097852 - MIR SINE MIR -114 148 79 224 291 78 15 chr2 12590857 12590980 -238096874 - MIR SINE MIR -63 145 34 22 56 0 0 chr2 12591604 12591640 -238096214 + AT_rich Low_complexity Low_complexity 1 36 0 207 0 0 0 chr2 12592134 12592157 -238095697 + (TG)n Simple_repeat Simple_repeat 2 24 0 190 372 64 0 chr2 12593017 12593111 -238094743 + L2 LINE L2 2175 2274 -1040 1432 108 78 13 chr2 12593241 12593473 -238094381 - L1PA13 LINE L1 -3 6160 5914 212 197 0 30 chr2 12594850 12594916 -238092938 + (TGAA)n Simple_repeat Simple_repeat 2 65 0 431 293 98 76 chr2 12597103 12597552 -238090302 + L1ME LINE L1 536 1015 -5055 1929 161 16 16 chr2 12597552 12597925 -238089929 - THE1C LTR MaLR -2 373 1 431 293 98 76 chr2 12597925 12598061 -238089793 + L1ME LINE L1 1015 1146 -4924 2188 113 0 10 chr2 12598465 12598775 -238089079 + AluSx SINE Alu 1 307 -5 496 242 11 68 chr2 12598865 12599055 -238088799 + L1MA9 LINE L1 6093 6271 -41 226 309 72 28 chr2 12599167 12599348 -238088506 + L1ME LINE L1 2312 2500 -3580 920 140 7 33 chr2 12599377 12599527 -238088327 + Tigger3(Golem) DNA MER2_type 2886 3031 0 1034 292 71 38 chr2 12599536 12600378 -238087476 - L1M4 LINE L1 -778 5368 4499 340 301 99 40 chr2 12600420 12600825 -238087029 - L1M4 LINE L1 -1838 4308 3880 2400 117 96 0 chr2 12600856 12601240 -238086614 + MSTA LTR MaLR 1 421 -7 8824 178 36 13 chr2 12601248 12602671 -238085183 + MSTA-int LTR MaLR 2 1469 -182 1993 129 0 7 chr2 12602671 12602994 -238084860 + AluSx SINE Alu 1 321 0 8824 178 36 13 chr2 12602994 12603177 -238084677 + MSTA-int LTR MaLR 1469 1646 -5 1873 157 144 5 chr2 12603183 12603558 -238084296 + MSTA LTR MaLR 1 427 -1 251 276 43 26 chr2 12603770 12603886 -238083968 - L1M4 LINE L1 -2532 3614 3497 245 330 18 18 chr2 12604034 12604143 -238083711 - MER81 DNA DNA -5 109 1 22 0 0 0 chr2 12604255 12604277 -238083577 + AT_rich Low_complexity Low_complexity 1 22 0 227 309 41 0 chr2 12604411 12604508 -238083346 + HAL1b LINE L1 261 361 -987 374 300 122 15 chr2 12604522 12604792 -238083062 + L1ME4a LINE L1 4549 4847 -1299 1068 267 92 101 chr2 12604859 12606099 -238081755 + L1MC4 LINE L1 6809 8037 -5 372 287 38 73 chr2 12606291 12606504 -238081350 + L1ME4a LINE L1 5629 5829 -333 12729 150 59 4 chr2 12606504 12608797 -238079057 + Tigger1 DNA MER2_type 1 2418 0 372 287 38 73 chr2 12608797 12608900 -238078954 + L1ME4a LINE L1 5829 5934 -228 772 273 64 93 chr2 12609142 12609788 -238078066 + MLT1G LTR MaLR 4 590 0 2124 142 14 19 chr2 12610149 12610515 -238077339 - THE1B LTR MaLR 0 364 1 11089 112 10 2 chr2 12610517 12612079 -238075775 - THE1B-int LTR MaLR -5 1575 1 2166 148 3 27 chr2 12612079 12612452 -238075402 - THE1B LTR MaLR 0 364 1 31 88 0 0 chr2 12612643 12612723 -238075131 + AT_rich Low_complexity Low_complexity 1 80 0 31 0 0 0 chr2 12612817 12612848 -238075006 + AT_rich Low_complexity Low_complexity 1 31 0 243 277 39 23 chr2 12612987 12613117 -238074737 + L1ME4a LINE L1 5969 6100 -21 1523 143 4 4 chr2 12613179 12613431 -238074423 - AluSq SINE Alu 0 307 56 483 309 43 35 chr2 12613555 12613811 -238074043 - MIR SINE MIR 0 262 5 246 291 93 23 chr2 12613818 12613904 -238073950 + L2 LINE L2 3220 3311 -2 1929 172 48 54 chr2 12614669 12615310 -238072544 + Tigger3(Golem) DNA MER2_type 1 3027 -2 327 96 0 0 chr2 12616615 12616667 -238071187 + (CA)n Simple_repeat Simple_repeat 2 53 0 413 328 95 12 chr2 12616858 12617099 -238070755 + MIR SINE MIR 2 262 0 198 0 0 0 chr2 12619393 12619415 -238068439 + (T)n Simple_repeat Simple_repeat 1 22 0 198 0 0 0 chr2 12620434 12620456 -238067398 + (T)n Simple_repeat Simple_repeat 1 22 0 417 54 0 0 chr2 12621029 12621085 -238066769 + (CA)n Simple_repeat Simple_repeat 2 57 0 437 275 30 8 chr2 12621137 12621268 -238066586 + MIR SINE MIR 11 144 -118 569 81 79 3 chr2 12622084 12622408 -238065446 + (TA)n Simple_repeat Simple_repeat 1 348 0 234 346 13 13 chr2 12623446 12623524 -238064330 - MER5A DNA MER1_type -104 85 8 229 0 83 0 chr2 12624075 12624111 -238063743 + T-rich Low_complexity Low_complexity 2 40 0 909 166 0 0 chr2 12624113 12624258 -238063596 - AluJb SINE Alu -31 281 137 274 254 0 17 chr2 12624263 12624322 -238063532 - AluS SINE Alu -241 61 4 624 14 0 0 chr2 12624502 12624575 -238063279 + (CA)n Simple_repeat Simple_repeat 1 73 0 1464 218 124 47 chr2 12624621 12625345 -238062509 - LTR1B LTR ERV1 0 826 7 553 333 27 18 chr2 12626158 12626383 -238061471 + MIR SINE MIR 8 234 -28 187 371 82 44 chr2 12627013 12627307 -238060547 - L2 LINE L2 -607 2707 2403 188 135 27 0 chr2 12627878 12627915 -238059939 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 317 269 70 39 chr2 12628237 12628393 -238059461 - L1MC4a LINE L1 -1878 5930 5770 310 224 41 15 chr2 12628675 12628874 -238058980 + L1ME LINE L1 5265 5505 -661 476 281 27 32 chr2 12628874 12629095 -238058759 + L1MC4 LINE L1 6824 7043 -999 2084 84 29 3 chr2 12629366 12629676 -238058178 + L1PA13 LINE L1 5846 6163 0 612 234 122 70 chr2 12629769 12630135 -238057719 + MLT1D LTR MaLR 27 419 -48 409 261 141 29 chr2 12630338 12630644 -238057210 + L1M4 LINE L1 3635 3974 -2172 382 22 0 0 chr2 12631305 12631351 -238056503 - MADE1 DNA Mariner -34 46 1 331 315 82 14 chr2 12631400 12631546 -238056308 - MLT1K LTR MaLR -371 217 62 289 298 36 41 chr2 12632164 12632287 -238055567 - MIR SINE MIR -37 171 49 553 289 0 0 chr2 12632291 12632419 -238055435 - Tigger1 DNA MER2_type 0 2418 2291 3650 150 38 42 chr2 12632520 12632814 -238055040 - Tigger1 DNA MER2_type -671 1747 1453 7226 33 0 0 chr2 12632814 12634021 -238053833 - L1PA4 LINE L1 -1 6154 4989 3650 150 38 42 chr2 12634021 12634378 -238053476 - Tigger1 DNA MER2_type -965 1453 1097 2398 122 14 3 chr2 12634378 12634738 -238053116 - THE1B LTR MaLR 0 364 1 3650 150 38 42 chr2 12634738 12634767 -238053087 - Tigger1 DNA MER2_type -1321 1097 1069 3692 110 30 11 chr2 12634775 12635287 -238052567 - L1PA11 LINE L1 0 6174 5648 2106 142 19 27 chr2 12635287 12635654 -238052200 - THE1B LTR MaLR 0 364 1 3692 110 30 11 chr2 12635654 12635712 -238052142 - L1PA11 LINE L1 -526 5648 5593 4738 180 46 8 chr2 12635712 12636596 -238051258 - Tigger1 DNA MER2_type -1500 918 1 217 219 0 0 chr2 12636906 12636947 -238050907 + (TG)n Simple_repeat Simple_repeat 2 42 0 25 0 0 0 chr2 12637230 12637255 -238050599 + AT_rich Low_complexity Low_complexity 1 25 0 313 228 13 0 chr2 12638774 12638853 -238049001 - MER116 DNA Mariner 0 80 1 415 277 66 52 chr2 12639832 12640079 -238047775 + MIR SINE MIR 5 249 -13 341 286 16 87 chr2 12640490 12640675 -238047179 + MIR SINE MIR 49 220 -42 202 301 30 66 chr2 12640865 12641031 -238046823 - L2 LINE L2 -44 3269 3110 386 234 43 58 chr2 12641180 12641368 -238046486 - MER53 DNA DNA -3 186 2 336 303 38 54 chr2 12641386 12641571 -238046283 + MIR3 SINE MIR 15 196 -12 2229 105 0 7 chr2 12641736 12642042 -238045812 - AluSx SINE Alu -8 304 1 22 0 0 0 chr2 12642258 12642280 -238045574 + AT_rich Low_complexity Low_complexity 1 22 0 987 260 110 7 chr2 12643271 12643571 -238044283 + MER58B DNA MER1_type 11 341 0 260 342 140 0 chr2 12644298 12644412 -238043442 - MIR SINE MIR -118 144 15 2180 260 112 27 chr2 12645564 12647900 -238039954 - L1ME1 LINE L1 -64 6913 4323 300 262 43 43 chr2 12647985 12648149 -238039705 - L1ME1 LINE L1 -2744 4213 4050 343 293 137 51 chr2 12648249 12648505 -238039349 - L1ME1 LINE L1 -6563 296 19 327 366 58 25 chr2 12648901 12649177 -238038677 + MLT1J LTR MaLR 97 381 -130 686 297 20 60 chr2 12650316 12650565 -238037289 + MIR SINE MIR 3 241 -21 279 0 0 0 chr2 12650968 12650999 -238036855 + (CA)n Simple_repeat Simple_repeat 1 31 0 21 36 0 0 chr2 12651932 12651960 -238035894 + AT_rich Low_complexity Low_complexity 1 28 0 227 386 96 56 chr2 12652265 12652589 -238035265 + L2 LINE L2 2917 3253 -19 303 333 200 21 chr2 12652887 12653127 -238034727 + L3 LINE CR1 1246 1528 -49 4651 194 93 17 chr2 12653948 12655298 -238032556 - L1MC1 LINE L1 -14 6319 4865 187 150 33 0 chr2 12655306 12655366 -238032488 + (TA)n Simple_repeat Simple_repeat 1 62 0 258 122 0 0 chr2 12655369 12655410 -238032444 - Alu SINE Alu -12 288 248 41 48 0 0 chr2 12655410 12655472 -238032382 + AT_rich Low_complexity Low_complexity 1 62 0 585 234 7 13 chr2 12655493 12655647 -238032207 - L1MC1 LINE L1 -1304 4842 4690 201 359 0 26 chr2 12655927 12656044 -238031810 + CT-rich Low_complexity Low_complexity 3 116 0 636 335 72 3 chr2 12656115 12656422 -238031432 + LTR16A LTR ERVL 123 450 0 1962 326 57 23 chr2 12656517 12657521 -238030333 + HERV16 LTR ERVL 114 1151 -3845 819 295 36 13 chr2 12657568 12657873 -238029981 + L1MEc LINE L1 108 419 -5977 346 319 22 0 chr2 12657931 12658066 -238029788 + L1MEc LINE L1 1936 2073 -4323 423 293 140 22 chr2 12658657 12658879 -238028975 + MIR SINE MIR 5 252 -10 25 0 0 0 chr2 12659297 12659322 -238028532 + AT_rich Low_complexity Low_complexity 1 25 0 401 234 22 135 chr2 12659360 12659672 -238028182 + L1MC4 LINE L1 7763 8039 -3 711 288 29 4 chr2 12660355 12660633 -238027221 - L1MEc LINE L1 -5487 909 625 607 342 27 45 chr2 12660654 12661028 -238026826 - L1MEc LINE L1 -5992 404 38 604 309 141 49 chr2 12661035 12661482 -238026372 + L2 LINE L2 2108 2595 -719 380 343 131 21 chr2 12661484 12662030 -238025824 + L2 LINE L2 2707 3313 0 2273 81 7 3 chr2 12662106 12662402 -238025452 + AluSq SINE Alu 1 297 -16 258 32 0 0 chr2 12662408 12662439 -238025415 + (TA)n Simple_repeat Simple_repeat 2 32 0 36 0 0 0 chr2 12662621 12662657 -238025197 + AT_rich Low_complexity Low_complexity 1 36 0 2954 170 113 0 chr2 12662668 12663269 -238024585 + LTR51 LTR ERV1 3 671 0 2091 167 5 11 chr2 12663901 12664278 -238023576 + THE1C LTR MaLR 1 375 0 357 287 85 8 chr2 12664408 12664537 -238023317 + MIR SINE MIR 110 248 -14 315 0 0 0 chr2 12664547 12664582 -238023272 + (TG)n Simple_repeat Simple_repeat 2 36 0 341 277 34 8 chr2 12664961 12665080 -238022774 - L2 LINE L2 0 3313 3192 21 0 0 0 chr2 12665263 12665284 -238022570 + AT_rich Low_complexity Low_complexity 1 21 0 241 316 165 8 chr2 12666494 12666627 -238021227 - L2 LINE L2 0 3313 3160 2018 249 55 32 chr2 12666645 12667881 -238019973 - L1ME2 LINE L1 -169 5995 4735 212 57 0 29 chr2 12667953 12667988 -238019866 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 13492 26 2 1 chr2 12667988 12670336 -238017518 - L1PA3 LINE L1 -24 6131 3782 938 267 62 31 chr2 12670341 12670629 -238017225 - MLT1E LTR MaLR -296 297 1 25 0 0 0 chr2 12670903 12670928 -238016926 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 12670945 12670974 -238016880 + AT_rich Low_complexity Low_complexity 1 29 0 279 0 0 0 chr2 12671906 12671937 -238015917 + (CA)n Simple_repeat Simple_repeat 2 32 0 438 79 0 0 chr2 12672154 12672217 -238015637 + (TG)n Simple_repeat Simple_repeat 2 64 0 1606 204 28 6 chr2 12672226 12672583 -238015271 - MLT1A1 LTR MaLR 0 365 1 1776 167 10 10 chr2 12673911 12674223 -238013631 - AluJo SINE Alu 0 312 1 485 243 0 0 chr2 12674489 12674600 -238013254 - L1MA9 LINE L1 -24 6288 6178 222 327 89 23 chr2 12675237 12675451 -238012403 - L2 LINE L2 -385 2929 2702 672 231 0 0 chr2 12675873 12676007 -238011847 + AluJo SINE Alu 1 134 -178 404 317 96 46 chr2 12676215 12676518 -238011336 - HERV16 LTR ERVL -4064 932 615 2275 104 0 0 chr2 12676552 12676859 -238010995 - AluSx SINE Alu -5 307 1 623 305 98 50 chr2 12677389 12677786 -238010068 - LTR16A LTR ERVL -4 446 31 22 56 0 0 chr2 12677931 12677967 -238009887 + AT_rich Low_complexity Low_complexity 1 36 0 975 140 6 12 chr2 12678370 12678534 -238009320 + L1PA10 LINE L1 6006 6168 0 292 378 55 8 chr2 12679048 12679175 -238008679 - L2 LINE L2 -22 3250 3118 27 29 0 0 chr2 12679816 12679850 -238008004 + AT_rich Low_complexity Low_complexity 1 34 0 582 297 18 32 chr2 12679965 12680184 -238007670 + L2 LINE L2 2270 2485 -829 2610 186 38 39 chr2 12681649 12682284 -238005570 - LTR27 LTR ERV1 0 636 3 307 364 91 0 chr2 12682360 12682525 -238005329 + MIR SINE MIR 9 188 -74 180 283 21 103 chr2 12683300 12683445 -238004409 + L2 LINE L2 3171 3303 -10 32 57 0 0 chr2 12683769 12683822 -238004032 + AT_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr2 12683934 12683969 -238003885 + AT_rich Low_complexity Low_complexity 1 35 0 430 190 17 0 chr2 12683991 12684107 -238003747 + (TA)n Simple_repeat Simple_repeat 1 118 0 23 0 0 0 chr2 12684363 12684386 -238003468 + AT_rich Low_complexity Low_complexity 1 23 0 314 45 23 0 chr2 12684471 12684515 -238003339 + (CA)n Simple_repeat Simple_repeat 2 46 0 589 294 24 48 chr2 12684673 12685003 -238002851 - MER90 LTR ERV1 0 575 254 750 166 13 0 chr2 12685003 12685217 -238002637 - L1P LINE L1 -743 5403 5203 180 0 0 0 chr2 12685217 12685237 -238002617 + (TC)n Simple_repeat Simple_repeat 1 20 0 1008 124 0 0 chr2 12685238 12685416 -238002438 + (TA)n Simple_repeat Simple_repeat 2 179 0 389 198 0 62 chr2 12685448 12685544 -238002310 - L1MC4 LINE L1 -1339 6703 6614 2589 221 7 5 chr2 12685573 12686170 -238001684 - L1P LINE L1 -970 5176 4579 4001 175 16 1 chr2 12686171 12686907 -238000947 + L1PA16 LINE L1 5411 6157 -9 180 152 0 0 chr2 12686953 12686986 -238000868 + (TG)n Simple_repeat Simple_repeat 2 34 0 1036 246 33 30 chr2 12687096 12687397 -238000457 - MER90 LTR ERV1 -311 303 2 252 235 62 37 chr2 12687712 12687793 -238000061 - MER21B LTR ERV1 -271 592 510 1152 132 3 11 chr2 12687900 12688855 -237998999 - HSATII Satellite Satellite 0 947 1 879 125 25 23 chr2 12688894 12689275 -237998579 - HSATII Satellite Satellite -63 381 1 888 139 14 8 chr2 12689381 12690564 -237997290 - HSATII Satellite Satellite -22 1189 1 24 0 0 0 chr2 12690814 12690838 -237997016 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 12690953 12690988 -237996866 + AT_rich Low_complexity Low_complexity 1 35 0 430 190 17 0 chr2 12691010 12691126 -237996728 + (TA)n Simple_repeat Simple_repeat 1 118 0 314 45 23 0 chr2 12691490 12691534 -237996320 + (CA)n Simple_repeat Simple_repeat 2 46 0 654 226 31 0 chr2 12694410 12694561 -237993293 + MLT1B LTR MaLR 3 158 -232 1181 159 50 43 chr2 12694561 12694819 -237993035 - THE1C LTR MaLR 0 375 116 473 303 48 5 chr2 12694929 12695117 -237992737 + MLT1B LTR MaLR 208 403 -64 221 167 21 0 chr2 12695135 12695183 -237992671 + MER5C DNA MER1_type 270 318 -6 368 291 119 8 chr2 12695658 12695792 -237992062 - MIR SINE MIR -99 163 15 372 125 0 0 chr2 12696622 12696686 -237991168 - HSATII Satellite Satellite -106 64 1 1172 118 8 10 chr2 12696711 12698661 -237989193 - HSATII Satellite Satellite -1 1946 1 1248 116 11 3 chr2 12698676 12699531 -237988323 - HSATII Satellite Satellite -99 861 1 958 121 16 18 chr2 12699562 12700942 -237986912 - HSATII Satellite Satellite -5 1376 1 1131 122 8 8 chr2 12700962 12703317 -237984537 - HSATII Satellite Satellite 0 2354 1 1017 122 6 9 chr2 12703454 12704530 -237983324 - HSATII Satellite Satellite -40 1072 1 1000 102 14 21 chr2 12704561 12704979 -237982875 - HSATII Satellite Satellite 0 415 1 1002 128 14 15 chr2 12705005 12706249 -237981605 - HSATII Satellite Satellite 0 1243 1 1001 122 4 12 chr2 12706365 12707455 -237980399 - HSATII Satellite Satellite -1 1080 1 975 108 18 25 chr2 12707490 12708197 -237979657 - HSATII Satellite Satellite -1 701 1 628 320 61 16 chr2 12708670 12708917 -237978937 + MIR SINE MIR 2 259 -3 458 319 94 19 chr2 12709421 12709888 -237977966 - L1MCa LINE L1 -5145 1281 780 346 365 7 34 chr2 12710210 12710358 -237977496 + MIR SINE MIR 29 172 -90 253 330 50 10 chr2 12711352 12711452 -237976402 - MIR SINE MIR -111 151 48 333 23 0 0 chr2 12712108 12712152 -237975702 - L1PA3 LINE L1 0 6155 6112 197 328 86 26 chr2 12712176 12712292 -237975562 + MIR SINE MIR 20 142 -66 853 271 18 5 chr2 12712345 12712566 -237975288 + MER58A DNA MER1_type 1 224 0 335 233 0 0 chr2 12712578 12712651 -237975203 - MIR SINE MIR -67 195 123 1828 153 19 0 chr2 12712751 12713059 -237974795 - THE1C-int LTR MaLR -1264 316 3 1739 188 32 24 chr2 12713061 12713433 -237974421 - THE1C LTR MaLR 0 375 1 5300 130 33 17 chr2 12713434 12714485 -237973369 + L1M1 LINE L1 2696 3763 -3802 262 207 0 37 chr2 12714485 12714567 -237973287 + (TA)n Simple_repeat Simple_repeat 1 79 0 180 395 37 12 chr2 12714884 12714965 -237972889 + L2 LINE L2 3168 3250 -22 22 0 0 0 chr2 12715563 12715585 -237972269 + AT_rich Low_complexity Low_complexity 1 22 0 219 36 0 0 chr2 12715910 12715938 -237971916 + (TA)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr2 12716505 12716526 -237971328 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 12717188 12717213 -237970641 + AT_rich Low_complexity Low_complexity 1 25 0 220 364 57 0 chr2 12717385 12717473 -237970381 + L2 LINE L2 3171 3263 -9 322 304 39 10 chr2 12718370 12718472 -237969382 + MIR SINE MIR 25 129 -79 359 326 21 14 chr2 12718723 12718864 -237968990 - MLT-int LTR MaLR -1212 523 382 376 195 33 60 chr2 12719066 12719201 -237968653 - MLT1H1 LTR MaLR -24 531 423 274 296 42 78 chr2 12719388 12719585 -237968269 - MLT1H1 LTR MaLR -361 194 1 10418 186 25 10 chr2 12719774 12721720 -237966134 + L1M1 LINE L1 725 2698 -4867 1857 155 41 30 chr2 12721721 12722088 -237965766 - THE1C LTR MaLR -2 373 3 2594 113 0 13 chr2 12722090 12722470 -237965384 - THE1C-int LTR MaLR 0 1580 1206 356 306 57 8 chr2 12722949 12723073 -237964781 + L2 LINE L2 3141 3270 -2 279 0 0 0 chr2 12723913 12723944 -237963910 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 299 15 15 chr2 12724180 12724247 -237963607 - L2 LINE L2 -5 3308 3242 289 402 26 39 chr2 12724738 12724972 -237962882 - L2 LINE L2 -556 2758 2528 1080 224 55 22 chr2 12725763 12726035 -237961819 - MLT2D LTR ERVL -133 281 1 220 312 64 48 chr2 12727153 12727278 -237960576 - MIR SINE MIR -71 191 65 220 125 18 18 chr2 12727327 12727383 -237960471 + (TA)n Simple_repeat Simple_repeat 2 57 0 1297 212 0 60 chr2 12727398 12727700 -237960154 - AluJb SINE Alu -28 284 1 881 338 65 32 chr2 12728113 12728711 -237959143 - ERVL LTR ERVL -1050 4714 4097 227 58 87 51 chr2 12728841 12728979 -237958875 + (TA)n Simple_repeat Simple_repeat 1 143 0 422 52 31 94 chr2 12728993 12729185 -237958669 + (TA)n Simple_repeat Simple_repeat 1 180 0 254 284 0 0 chr2 12729193 12729281 -237958573 + L1MC4 LINE L1 6616 6703 -1339 235 283 0 22 chr2 12729255 12729347 -237958507 - L1MC4 LINE L1 -1339 6703 6614 * 198 209 0 0 chr2 12729347 12729390 -237958464 + (TA)n Simple_repeat Simple_repeat 2 44 0 227 337 0 0 chr2 12729391 12729480 -237958374 - L1MC4 LINE L1 -1339 6703 6615 219 139 0 0 chr2 12729483 12729519 -237958335 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 317 315 0 0 chr2 12729519 12729608 -237958246 + L1MC4 LINE L1 6615 6703 -1339 311 297 11 0 chr2 12729528 12729619 -237958235 - L1MC4 LINE L1 -1339 6703 6612 * 265 34 85 0 chr2 12729657 12729716 -237958138 + (ATATG)n Simple_repeat Simple_repeat 1 64 0 291 151 40 40 chr2 12729803 12729955 -237957899 + (TA)n Simple_repeat Simple_repeat 2 153 0 5586 223 38 31 chr2 12729960 12730762 -237957092 + L1 LINE L1 2341 3136 -3010 5502 68 3 9 chr2 12730762 12731496 -237956358 + L1PA8 LINE L1 5437 6172 0 5586 223 38 31 chr2 12731496 12732859 -237954995 + L1 LINE L1 3136 4437 -1709 357 135 0 124 chr2 12733321 12733410 -237954444 - MADE1 DNA Mariner 0 80 3 1845 146 0 64 chr2 12733923 12734252 -237953602 - AluSx SINE Alu -2 310 3 25 51 0 0 chr2 12734392 12734431 -237953423 + AT_rich Low_complexity Low_complexity 1 39 0 27 0 0 0 chr2 12734524 12734551 -237953303 + AT_rich Low_complexity Low_complexity 1 27 0 208 260 90 10 chr2 12735537 12735637 -237952217 + MIR3 SINE MIR 98 205 -3 1586 166 3 46 chr2 12735683 12735985 -237951869 + AluJo SINE Alu 7 295 -17 1665 172 33 44 chr2 12736256 12736622 -237951232 - THE1C LTR MaLR 0 375 14 815 243 80 24 chr2 12736748 12737123 -237950731 - MER114 LTR ERV -30 618 223 2410 129 18 36 chr2 12737265 12737708 -237950146 + L1MA2 LINE L1 5859 6293 -11 29 0 0 0 chr2 12737712 12737741 -237950113 + AT_rich Low_complexity Low_complexity 1 29 0 3843 247 59 21 chr2 12737754 12739796 -237948058 - L1MC/D LINE L1 -743 5403 3684 5056 156 50 4 chr2 12739798 12740713 -237947141 - L1MA7 LINE L1 -1 6290 5334 1299 176 88 6 chr2 12740707 12741025 -237946829 + L1MA3 LINE L1 4121 4464 -1682 * 644 184 37 18 chr2 12741841 12742004 -237945850 - L1MA8 LINE L1 -10 6281 6116 22 35 0 0 chr2 12742929 12742958 -237944896 + AT_rich Low_complexity Low_complexity 1 29 0 4085 207 15 15 chr2 12743537 12744339 -237943515 + L1PA16 LINE L1 12 813 -6752 * 5641 152 22 4 chr2 12744336 12745653 -237942201 + L1MA3 LINE L1 4788 6153 -152 5126 179 41 7 chr2 12746083 12748062 -237939792 + L1PA16 LINE L1 5544 7584 -1 254 310 26 0 chr2 12748133 12748246 -237939608 - L2 LINE L2 -630 2684 2569 497 276 41 14 chr2 12748737 12748882 -237938972 + L2 LINE L2 3165 3313 0 423 0 0 0 chr2 12750040 12750087 -237937767 + (TATAA)n Simple_repeat Simple_repeat 3 49 0 463 11 55 83 chr2 12750144 12750515 -237937339 + (TA)n Simple_repeat Simple_repeat 1 360 0 412 198 40 34 chr2 12750518 12750695 -237937159 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 1220 188 4 0 chr2 12750990 12751219 -237936635 + L1P LINE L1 4452 4681 -1465 * 5603 162 22 9 chr2 12751191 12752426 -237935428 + L1MA7 LINE L1 5039 6291 0 353 265 82 55 chr2 12752635 12753046 -237934808 + L1 LINE L1 4059 4482 -1664 1291 259 94 23 chr2 12753361 12754208 -237933646 + L1MDa LINE L1 2394 3305 -3235 2527 233 44 16 chr2 12754323 12755057 -237932797 + L1MB2 LINE L1 4181 4934 -1212 2552 40 7 3 chr2 12756796 12757100 -237930754 - AluY SINE Alu -6 305 1 199 307 134 29 chr2 12757475 12757713 -237930141 - L3 LINE CR1 -177 1400 1138 238 274 137 42 chr2 12758204 12758372 -237929482 + MIR SINE MIR 53 236 -26 243 327 13 61 chr2 12758982 12759148 -237928706 + MIR SINE MIR 50 206 -56 279 79 0 0 chr2 12759412 12759450 -237928404 + (CA)n Simple_repeat Simple_repeat 2 39 0 894 305 4 0 chr2 12759455 12759688 -237928166 + L1ME1 LINE L1 108 341 -6055 618 189 30 0 chr2 12759716 12759848 -237928006 + L1MB2 LINE L1 5666 5801 -382 67 55 0 0 chr2 12759849 12759958 -237927896 + AT_rich Low_complexity Low_complexity 1 109 0 1387 153 38 103 chr2 12759961 12760387 -237927467 + L1MB2 LINE L1 5783 6180 -3 3291 256 66 51 chr2 12760545 12762775 -237925079 + L1ME1 LINE L1 3971 6230 -5 488 282 134 32 chr2 12763980 12764569 -237923285 + L1M4 LINE L1 3713 4361 -1785 348 284 43 49 chr2 12764582 12764744 -237923110 + L1M4 LINE L1 4688 4848 -1298 29 70 0 0 chr2 12764836 12764893 -237922961 + AT_rich Low_complexity Low_complexity 1 57 0 5894 94 15 70 chr2 12764955 12765937 -237921917 - L1PA13 LINE L1 -5 6158 5250 1715 195 0 3 chr2 12765937 12766250 -237921604 - AluSx SINE Alu 0 312 1 5894 94 15 70 chr2 12766250 12766819 -237921035 - L1PA13 LINE L1 -913 5250 4651 323 343 39 6 chr2 12767133 12767311 -237920543 + L1ME LINE L1 4745 4928 -1218 555 246 88 36 chr2 12767629 12767934 -237919920 + L1ME LINE L1 5301 5621 -549 358 283 40 52 chr2 12768451 12768624 -237919230 - HERV16 LTR ERVL -959 4805 4635 1737 197 18 91 chr2 12768657 12768965 -237918889 + MER31B LTR ERV1 5 265 -201 2081 120 55 0 chr2 12768965 12769257 -237918597 - AluSg SINE Alu -2 308 1 1737 197 18 91 chr2 12769257 12769445 -237918409 + MER31B LTR ERV1 265 465 -1 279 105 0 0 chr2 12770245 12770283 -237917571 - L1MC3 LINE L1 -1305 6480 6443 24 0 0 0 chr2 12770360 12770384 -237917470 + AT_rich Low_complexity Low_complexity 1 24 0 245 286 178 16 chr2 12770733 12770918 -237916936 + HAL1b LINE L1 339 553 -795 292 300 80 27 chr2 12771610 12771760 -237916094 + MIR SINE MIR 68 225 -37 1496 322 55 25 chr2 12771938 12772479 -237915375 - HERV16 LTR ERVL -2023 2973 2450 264 59 0 0 chr2 12772479 12772513 -237915341 + (TG)n Simple_repeat Simple_repeat 1 34 0 1496 322 55 25 chr2 12772513 12773810 -237914044 - HERV16 LTR ERVL -2546 2450 962 1887 300 81 28 chr2 12773888 12774689 -237913165 - HERV16 LTR ERVL -4150 846 3 881 249 56 56 chr2 12774751 12775125 -237912729 - MLT1A2 LTR MaLR 0 374 1 286 288 0 0 chr2 12775201 12775267 -237912587 - LTR16A LTR ERVL -321 129 64 744 312 38 16 chr2 12775297 12775611 -237912243 + LTR16A LTR ERVL 120 440 -10 31 44 0 0 chr2 12775635 12775680 -237912174 + AT_rich Low_complexity Low_complexity 1 45 0 363 140 11 65 chr2 12775703 12775796 -237912058 + L1MA5 LINE L1 6213 6300 0 21 36 0 0 chr2 12776267 12776295 -237911559 + AT_rich Low_complexity Low_complexity 1 28 0 537 304 71 29 chr2 12776593 12776833 -237911021 + MIR SINE MIR 2 251 -11 196 398 34 0 chr2 12777054 12777142 -237910712 - MIR SINE MIR -112 150 60 180 0 0 0 chr2 12777946 12777966 -237909888 + (TTG)n Simple_repeat Simple_repeat 2 21 0 324 261 80 0 chr2 12779054 12779142 -237908712 - L1MC4 LINE L1 -1334 6708 6614 318 229 0 62 chr2 12779108 12779204 -237908650 + L1MC4 LINE L1 6614 6703 -1339 * 23236 176 22 22 chr2 12779955 12780672 -237907182 + L1PA10 LINE L1 1 716 -5767 192 40 0 0 chr2 12780672 12780697 -237907157 + (CACAG)n Simple_repeat Simple_repeat 1 25 0 23236 176 22 22 chr2 12780697 12786423 -237901431 + L1PA10 LINE L1 716 6471 -12 3896 132 45 74 chr2 12786588 12787914 -237899940 + pTR5 LTR ERV1 168 2295 -143 256 307 9 163 chr2 12788533 12788748 -237899106 - MER91A DNA MER1_type -1 195 14 228 86 0 0 chr2 12788903 12788938 -237898916 + (CA)n Simple_repeat Simple_repeat 2 36 0 2244 114 0 0 chr2 12788977 12789276 -237898578 - AluSx SINE Alu -11 301 3 983 378 17 19 chr2 12791220 12791807 -237896047 + L1PA16 LINE L1 788 1373 -6201 310 347 0 0 chr2 12791948 12792046 -237895808 + L1PA16 LINE L1 2085 2182 -5399 11807 224 61 14 chr2 12792352 12796561 -237891293 + L1PA16 LINE L1 2252 6769 -835 1485 181 51 40 chr2 12796561 12796932 -237890922 - THE1C LTR MaLR 0 375 1 11807 224 61 14 chr2 12796932 12797810 -237890044 + L1PA16 LINE L1 6769 7604 0 572 276 131 22 chr2 12798267 12798730 -237889124 - MLT1E1 LTR MaLR -1 653 5 237 295 74 66 chr2 12799318 12799459 -237888395 + HAL1 LINE L1 750 888 -1619 324 0 0 0 chr2 12799459 12799495 -237888359 + (TAA)n Simple_repeat Simple_repeat 2 37 0 237 295 74 66 chr2 12799495 12799719 -237888135 + HAL1 LINE L1 888 1118 -1389 449 251 151 59 chr2 12799779 12800137 -237887717 + HAL1b LINE L1 417 807 -541 2038 98 42 3 chr2 12800649 12800935 -237886919 - AluSx SINE Alu -13 299 3 686 171 17 0 chr2 12802062 12802179 -237885675 + FRAM SINE Alu 43 161 -15 4170 168 58 10 chr2 12803178 12804046 -237883808 + L1MC1 LINE L1 5425 6333 0 1033 147 0 43 chr2 12804468 12804652 -237883202 - Tigger2a DNA MER2_type -258 176 1 353 297 67 61 chr2 12804674 12806366 -237881488 + L1ME3A LINE L1 3780 5544 -618 3931 195 53 20 chr2 12806367 12807606 -237880248 + L1MB4 LINE L1 4903 6180 0 306 264 124 0 chr2 12807641 12807762 -237880092 + L1ME3A LINE L1 5561 5696 -474 431 276 103 5 chr2 12807781 12807995 -237879859 + L1ME3A LINE L1 5755 5989 -181 1745 179 30 0 chr2 12808684 12808980 -237878874 + AluJb SINE Alu 3 307 -5 2707 251 24 93 chr2 12808980 12810118 -237877736 - L1P LINE L1 -4028 2118 1060 * 3699 164 94 15 chr2 12810112 12810838 -237877016 + L1PA8 LINE L1 5390 6172 0 22 0 0 0 chr2 12810937 12810959 -237876895 + AT_rich Low_complexity Low_complexity 1 22 0 2046 131 0 10 chr2 12811126 12811417 -237876437 - AluSx SINE Alu -24 288 1 182 340 61 7 chr2 12812657 12812804 -237875050 + MIR SINE MIR 51 205 -57 30 83 0 0 chr2 12813557 12813629 -237874225 + AT_rich Low_complexity Low_complexity 1 72 0 1846 189 87 13 chr2 13013810 13014270 -237673584 + LTR54B LTR ERV1 1 494 -4 281 298 0 10 chr2 13014645 13014749 -237673105 + MER57-int LTR ERV1 389 491 -7046 397 188 6 0 chr2 13014828 13014959 -237672895 + L1PA3 LINE L1 5938 6070 -85 300 228 0 0 chr2 13015157 13015271 -237672583 + C-rich Low_complexity Low_complexity 1 114 0 279 289 9 18 chr2 13015447 13015561 -237672293 + MLT1H LTR MaLR 433 545 -4 346 308 30 8 chr2 13015564 13015697 -237672157 + MER69 DNA AcHobo 299 434 -792 1380 105 0 16 chr2 13015715 13015847 -237672007 + AluSg SINE Alu 3 133 -177 1804 140 19 51 chr2 13015847 13016161 -237671693 + AluSx SINE Alu 1 304 -8 1380 105 0 16 chr2 13016161 13016219 -237671635 + AluSg SINE Alu 133 190 -120 234 0 0 0 chr2 13016272 13016298 -237671556 + (GA)n Simple_repeat Simple_repeat 1 26 0 1784 265 88 43 chr2 13016308 13017252 -237670602 + L1MEc LINE L1 394 1379 -5017 264 293 66 19 chr2 13017465 13017677 -237670177 + L1MEc LINE L1 829 1050 -5346 2377 127 13 8 chr2 13017812 13018198 -237669656 - Harlequin LTR ERV1 -6508 388 1 1546 168 88 131 chr2 13018198 13018710 -237669144 - LTR2B LTR ERV1 0 490 1 425 222 76 41 chr2 13018920 13019091 -237668763 + L1M4 LINE L1 4744 4920 -1226 982 234 65 0 chr2 13019124 13019431 -237668423 + L1M4 LINE L1 4973 5299 -847 315 350 20 20 chr2 13019483 13019729 -237668125 + L1ME1 LINE L1 5898 6143 -23 25 65 0 0 chr2 13019730 13019776 -237668078 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr2 13019789 13019810 -237668044 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 13019999 13020024 -237667830 + AT_rich Low_complexity Low_complexity 1 25 0 1571 258 92 53 chr2 13020362 13020526 -237667328 + L1ME1 LINE L1 4936 5092 -1074 273 75 0 0 chr2 13020526 13020566 -237667288 + (CA)n Simple_repeat Simple_repeat 1 40 0 1571 258 92 53 chr2 13020566 13020893 -237666961 + L1ME1 LINE L1 5092 5405 -761 1076 222 125 44 chr2 13020893 13021325 -237666529 - MLT1C LTR MaLR 0 467 1 1571 258 92 53 chr2 13021325 13021893 -237665961 + L1ME1 LINE L1 5405 6026 -140 182 234 0 43 chr2 13021954 13022001 -237665853 + L3 LINE CR1 652 696 -881 1872 145 26 40 chr2 13022931 13023311 -237664543 + THE1C LTR MaLR 1 375 0 257 318 11 11 chr2 13024939 13025027 -237662827 + MIR SINE MIR 61 148 -114 256 316 105 0 chr2 13025211 13025306 -237662548 + MIR SINE MIR 126 230 -32 203 265 59 15 chr2 13025989 13026057 -237661797 + MER5B DNA MER1_type 5 75 -103 1553 106 0 55 chr2 13027243 13027479 -237660375 + AluSq SINE Alu 78 300 -13 1756 179 69 45 chr2 13027694 13028112 -237659742 - MSTC LTR MaLR 0 428 1 22 0 0 0 chr2 13028659 13028681 -237659173 + AT_rich Low_complexity Low_complexity 1 22 0 316 237 0 0 chr2 13028712 13028771 -237659083 + MER20 DNA MER1_type 1 59 -160 637 226 45 0 chr2 13028813 13028968 -237658886 + MER20 DNA MER1_type 55 216 -3 293 261 70 63 chr2 13028984 13029126 -237658728 - MIR SINE MIR -59 203 61 289 93 37 0 chr2 13029226 13029280 -237658574 + (TA)n Simple_repeat Simple_repeat 1 56 0 549 284 10 18 chr2 13029284 13029447 -237658407 - MLT2B1 LTR ERVL -87 433 228 1749 154 53 56 chr2 13029455 13029646 -237658208 - THE1C LTR MaLR 0 375 184 1646 151 102 37 chr2 13029646 13029998 -237657856 + THE1C LTR MaLR 1 375 0 1749 154 53 56 chr2 13029998 13030182 -237657672 - THE1C LTR MaLR -191 184 1 226 226 57 0 chr2 13030182 13030232 -237657622 - MLT2B1 LTR ERVL -288 232 180 480 176 88 0 chr2 13030517 13030619 -237657235 - MER20 DNA MER1_type -32 187 77 390 281 21 0 chr2 13030620 13030716 -237657138 - HERV16 LTR ERVL -4845 151 54 213 159 23 0 chr2 13031253 13031297 -237656557 + (TA)n Simple_repeat Simple_repeat 2 46 0 21 36 0 0 chr2 13032803 13032831 -237655023 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 13032936 13032959 -237654895 + (TA)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr2 13033042 13033063 -237654791 + AT_rich Low_complexity Low_complexity 1 21 0 201 329 43 0 chr2 13033431 13033501 -237654353 + L2 LINE L2 3198 3270 -2 42 20 0 0 chr2 13034032 13034081 -237653773 + AT_rich Low_complexity Low_complexity 1 49 0 1713 210 71 14 chr2 13034795 13035219 -237652635 - L1MB4 LINE L1 -2 6178 5731 1105 78 1 106 chr2 13035223 13035422 -237652432 - L1PA11 LINE L1 -2 6172 5992 476 371 30 5 chr2 13035426 13035628 -237652226 + L2 LINE L2 1820 2026 -1288 655 186 8 8 chr2 13036976 13037100 -237650754 - L1MD2 LINE L1 -24 6335 6212 249 299 0 11 chr2 13037597 13037684 -237650170 - L1MEd LINE L1 -4871 1248 1163 1518 166 11 70 chr2 13037887 13038242 -237649612 - L1MA9 LINE L1 0 6312 5979 435 312 59 11 chr2 13038394 13038580 -237649274 + L2 LINE L2 3119 3313 0 406 129 100 0 chr2 13040108 13040178 -237647676 - MADE1 DNA Mariner -2 78 2 189 107 0 0 chr2 13040256 13040284 -237647570 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2155 95 0 0 chr2 13040316 13040620 -237647234 + L1PA13 LINE L1 5857 6160 -3 412 386 12 12 chr2 13040725 13040971 -237646883 + MIR SINE MIR 6 251 -11 203 295 0 16 chr2 13042042 13042103 -237645751 + (CATA)n Simple_repeat Simple_repeat 3 62 0 551 268 95 25 chr2 13042623 13042866 -237644988 - L1ME1 LINE L1 -4 6162 5903 764 165 30 0 chr2 13042872 13043005 -237644849 + MER2 DNA MER2_type 6 142 -203 411 234 24 69 chr2 13043005 13043149 -237644705 - L1ME1 LINE L1 -552 5614 5476 228 197 40 26 chr2 13043403 13043479 -237644375 - L1ME2 LINE L1 -1 6163 6087 780 301 53 40 chr2 13043483 13043623 -237644231 - L1MEc LINE L1 -3279 2936 2799 1987 152 0 3 chr2 13043623 13043925 -237643929 - AluJb SINE Alu -8 304 4 780 301 53 40 chr2 13043925 13044391 -237643463 - L1MEc LINE L1 -3416 2799 2322 354 121 30 0 chr2 13044432 13044498 -237643356 + LTR60 LTR ERV1 1 68 -518 928 224 44 59 chr2 13044740 13044771 -237643083 + LTR43 LTR ERV1 190 220 -382 2156 104 7 7 chr2 13044771 13045080 -237642774 + AluSc SINE Alu 1 309 0 928 224 44 59 chr2 13045080 13045320 -237642534 + LTR43 LTR ERV1 220 457 -145 947 272 80 49 chr2 13045537 13046033 -237641821 - L1MEc LINE L1 -4092 2304 1825 2109 112 0 0 chr2 13046033 13046320 -237641534 + AluSx SINE Alu 1 287 -25 207 88 0 0 chr2 13046323 13046357 -237641497 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 947 272 80 49 chr2 13046357 13046813 -237641041 - L1MEc LINE L1 -4572 1824 1265 597 239 70 37 chr2 13047154 13047397 -237640457 + MER57-int LTR ERV1 1710 1960 -2976 * 2612 233 71 17 chr2 13047394 13048323 -237639531 + MER57-int LTR ERV1 3294 4529 -407 3422 257 14 16 chr2 13048332 13049165 -237638689 + MER57-int LTR ERV1 6312 7143 -394 1340 224 100 20 chr2 13049166 13049626 -237638228 + LTR54B LTR ERV1 1 497 -1 1499 143 109 34 chr2 13050521 13050870 -237636984 - THE1C LTR MaLR 0 375 1 409 274 130 43 chr2 13051971 13052201 -237635653 - MIR SINE MIR -1 261 12 183 368 26 13 chr2 13052328 13052404 -237635450 - MIR3 SINE MIR -117 91 15 192 40 0 0 chr2 13052439 13052464 -237635390 + (CA)n Simple_repeat Simple_repeat 2 26 0 25 31 0 0 chr2 13052731 13052763 -237635091 + AT_rich Low_complexity Low_complexity 1 32 0 201 211 0 0 chr2 13052785 13052837 -237635017 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 447 19 0 0 chr2 13052854 13052906 -237634948 + (CA)n Simple_repeat Simple_repeat 1 52 0 200 350 126 42 chr2 13052992 13053135 -237634719 + MIR SINE MIR 20 174 -88 330 204 20 0 chr2 13053182 13053280 -237634574 + (TA)n Simple_repeat Simple_repeat 2 101 0 357 169 48 6 chr2 13053337 13053503 -237634351 + (TA)n Simple_repeat Simple_repeat 2 174 0 1914 134 24 0 chr2 13053789 13054079 -237633775 + AluSx SINE Alu 1 297 -15 333 118 0 0 chr2 13054364 13054415 -237633439 + (CA)n Simple_repeat Simple_repeat 2 52 0 1645 85 4 0 chr2 13054523 13054758 -237633096 - L1MA2 LINE L1 0 6304 6069 561 88 0 0 chr2 13054759 13054839 -237633015 - L1MA1 LINE L1 -81 6221 6142 8926 104 16 9 chr2 13054971 13056242 -237631612 + HSMAR1 DNA Mariner 4 1284 -3 225 0 0 0 chr2 13056242 13056267 -237631587 + (TA)n Simple_repeat Simple_repeat 2 26 0 210 235 29 59 chr2 13056689 13056757 -237631097 + MIR SINE MIR 186 251 -11 193 269 15 30 chr2 13056985 13057052 -237630802 + L2 LINE L2 3203 3268 -4 233 356 30 20 chr2 13057116 13057217 -237630637 + MIR3 SINE MIR 91 192 -16 389 295 126 63 chr2 13057669 13058082 -237629772 - MLT1H LTR MaLR -4 545 107 291 332 15 49 chr2 13058155 13058420 -237629434 - HAL1 LINE L1 -504 2003 1748 271 279 43 101 chr2 13058758 13058966 -237628888 + LTR67 LTR ERVL 362 557 0 1118 186 59 116 chr2 13059070 13059348 -237628506 - MLT1A1 LTR MaLR 0 365 114 2045 129 50 19 chr2 13059348 13059712 -237628142 + THE1C LTR MaLR 1 375 0 1118 186 59 116 chr2 13059712 13059820 -237628034 - MLT1A1 LTR MaLR -251 114 1 851 292 133 49 chr2 13059847 13060875 -237626979 - HAL1 LINE L1 -883 1624 510 304 341 39 55 chr2 13060998 13061180 -237626674 - HAL1 LINE L1 -2324 183 5 1523 258 72 44 chr2 13062037 13062603 -237625251 - MER119 DNA MER1_type -1 582 1 221 382 22 29 chr2 13062691 13062827 -237625027 - MIR3 SINE MIR -3 205 71 22 35 0 0 chr2 13063336 13063365 -237624489 + AT_rich Low_complexity Low_complexity 1 29 0 250 275 123 43 chr2 13064341 13064479 -237623375 - Charlie8 DNA MER1_type -2153 264 116 201 74 0 0 chr2 13064590 13064617 -237623237 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1030 223 33 110 chr2 13065692 13066196 -237621658 + LTR8A LTR ERV1 55 586 -105 306 73 0 0 chr2 13066197 13066206 -237621648 + (TG)n Simple_repeat Simple_repeat 1 50 0 306 73 0 0 chr2 13066206 13066247 -237621607 + (TG)n Simple_repeat Simple_repeat 2 42 0 192 40 0 0 chr2 13067412 13067437 -237620417 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 3765 35 2 2 chr2 13068926 13069382 -237618472 - L1PA3 LINE L1 -3 6152 5697 214 239 0 0 chr2 13070652 13070698 -237617156 + MIR SINE MIR 95 140 -122 262 376 18 0 chr2 13070824 13070933 -237616921 - MIR3 SINE MIR -15 193 83 1917 140 88 37 chr2 13072366 13072773 -237615081 - LTR23 LTR ERV1 -9 428 1 497 226 26 9 chr2 13072873 13072988 -237614866 - LTR23-int LTR ERV1 -223 4900 4784 6554 155 83 10 chr2 13072998 13074261 -237613593 - LTR49-int LTR ERV1 -657 5674 4320 215 61 30 0 chr2 13074286 13074319 -237613535 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1486 168 35 80 chr2 13074319 13074693 -237613161 - LTR49-int LTR ERV1 -4417 1914 1558 1546 200 43 130 chr2 13074818 13075488 -237612366 - LTR9 LTR ERV1 0 612 1 2078 164 50 9 chr2 13076298 13076718 -237611136 - LTR23 LTR ERV1 0 437 1 22 35 0 0 chr2 13076989 13077018 -237610836 + AT_rich Low_complexity Low_complexity 1 29 0 1324 184 92 48 chr2 13077074 13077432 -237610422 - MLT1A2 LTR MaLR 0 374 1 198 396 36 27 chr2 13077686 13077797 -237610057 - MIR SINE MIR -63 145 34 396 0 0 0 chr2 13078392 13078436 -237609418 + (CA)n Simple_repeat Simple_repeat 1 44 0 592 241 45 11 chr2 13078609 13078780 -237609074 + MLT1H LTR MaLR 1 153 -396 1829 206 84 24 chr2 13078850 13079312 -237608542 - LTR2B LTR ERV1 0 490 1 41047 66 14 21 chr2 13079312 13084822 -237603032 - Harlequin LTR ERV1 0 6896 1426 186 43 0 0 chr2 13084822 13084845 -237603009 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 41047 66 14 21 chr2 13084845 13084872 -237602982 - Harlequin LTR ERV1 -5470 1426 1400 6054 255 60 38 chr2 13084988 13087079 -237600775 - L1MD2 LINE L1 -159 6460 4264 2076 177 67 0 chr2 13087079 13087480 -237600374 - MSTA LTR MaLR 0 428 1 6054 255 60 38 chr2 13087480 13089120 -237598734 - L1MD2 LINE L1 -2355 4264 2661 428 173 0 0 chr2 13089465 13089540 -237598314 + MSTD LTR MaLR 322 396 0 1149 273 14 39 chr2 13089540 13090024 -237597830 - L1MD2 LINE L1 -5861 548 20 283 340 116 7 chr2 13092617 13092764 -237595090 + MIR SINE MIR 68 230 -32 21 0 0 0 chr2 13093136 13093157 -237594697 + AT_rich Low_complexity Low_complexity 1 21 0 1761 186 3 0 chr2 13093573 13093864 -237593990 - AluJo SINE Alu -11 301 10 3581 263 20 25 chr2 13094407 13095261 -237592593 + L1MC3 LINE L1 2 848 -5359 1965 111 0 88 chr2 13095261 13095602 -237592252 + AluSx SINE Alu 1 311 -1 3581 263 20 25 chr2 13095602 13096109 -237591745 + L1MC3 LINE L1 848 1356 -4851 1812 232 112 48 chr2 13096110 13097343 -237590511 + L1MC3 LINE L1 1605 2825 -3739 4239 239 66 53 chr2 13097479 13098768 -237589086 + L1MC3 LINE L1 2792 4063 -2501 273 57 0 0 chr2 13098768 13098803 -237589051 + (TG)n Simple_repeat Simple_repeat 2 36 0 4239 239 66 53 chr2 13098803 13101505 -237586349 + L1MC3 LINE L1 4063 5790 -774 1108 215 19 8 chr2 13101662 13101927 -237585927 + L1MC3 LINE L1 7928 8195 -8 21 0 0 0 chr2 13103594 13103615 -237584239 + AT_rich Low_complexity Low_complexity 1 21 0 487 274 52 24 chr2 13105888 13106100 -237581754 - HAL1 LINE L1 0 2507 2290 378 366 32 32 chr2 13106220 13106471 -237581383 - MIR SINE MIR 0 262 12 1546 144 4 0 chr2 13106477 13106713 -237581141 + AluSq SINE Alu 1 237 -76 431 279 0 33 chr2 13107884 13108006 -237579848 - LTR49-int LTR ERV1 -3773 2558 2441 243 0 0 0 chr2 13108151 13108178 -237579676 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 7537 28 0 0 chr2 13108178 13109466 -237578388 - L1PA3 LINE L1 -13 6142 4854 1085 243 6 61 chr2 13110768 13111097 -237576757 - LTR40b LTR ERVL 0 462 152 381 345 39 57 chr2 13111207 13111436 -237576418 - L1MEd LINE L1 -5640 479 255 23 0 0 0 chr2 13111524 13111547 -237576307 + AT_rich Low_complexity Low_complexity 1 23 0 1968 203 31 14 chr2 13111661 13112080 -237575774 - MSTB LTR MaLR 0 426 1 189 404 72 18 chr2 13112107 13112273 -237575581 + L2 LINE L2 2872 3046 -226 213 253 25 0 chr2 13112376 13112455 -237575399 + (TAA)n Simple_repeat Simple_repeat 3 83 0 201 381 79 5 chr2 13112481 13112670 -237575184 - MIR SINE MIR -37 225 23 24 0 0 0 chr2 13112693 13112717 -237575137 + AT_rich Low_complexity Low_complexity 1 24 0 212 250 33 0 chr2 13113272 13113332 -237574522 + A-rich Low_complexity Low_complexity 4 65 0 225 305 84 15 chr2 13115588 13115719 -237572135 - MIR SINE MIR 0 262 123 5507 219 36 62 chr2 13117190 13119503 -237568351 + L1MC2 LINE L1 3510 5729 -615 2028 134 3 0 chr2 13119503 13119802 -237568052 + AluSx SINE Alu 1 300 -12 5507 219 36 62 chr2 13119802 13120393 -237567461 + L1MC2 LINE L1 5729 6334 -10 333 0 0 0 chr2 13120393 13120430 -237567424 + (A)n Simple_repeat Simple_repeat 1 37 0 4780 173 39 19 chr2 13123028 13123928 -237563926 + L1MA8 LINE L1 5304 6184 -107 13472 152 22 13 chr2 13123928 13124440 -237563414 - Tigger1 DNA MER2_type 0 2418 1912 1635 196 3 0 chr2 13124440 13124736 -237563118 - AluJo SINE Alu -15 297 1 13472 152 22 13 chr2 13124736 13125776 -237562078 - Tigger1 DNA MER2_type -506 1912 882 198 0 0 0 chr2 13125776 13125798 -237562056 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 2199 89 3 3 chr2 13125800 13126091 -237561763 - AluSp SINE Alu -22 291 1 13472 152 22 13 chr2 13126091 13126932 -237560922 - Tigger1 DNA MER2_type -1536 882 1 4780 173 39 19 chr2 13126932 13126998 -237560856 + L1MA8 LINE L1 6184 6290 -1 276 235 88 10 chr2 13127050 13127152 -237560702 + L1MA9 LINE L1 6116 6225 -87 208 317 10 20 chr2 13127388 13127489 -237560365 - MIR3 SINE MIR -104 104 5 252 272 28 84 chr2 13128775 13128915 -237558939 - MIR SINE MIR -65 143 18 933 268 65 74 chr2 13129054 13129513 -237558341 - MER77 LTR ERV1 -6 599 145 388 271 18 47 chr2 13129498 13129668 -237558186 - MER77 LTR ERV1 -360 245 81 * 2051 186 59 12 chr2 13129711 13130120 -237557734 - MSTA LTR MaLR 0 428 1 518 287 64 5 chr2 13131329 13131531 -237556323 + LTR50 LTR ERVL 11 224 -571 405 305 136 53 chr2 13131528 13131830 -237556024 + LTR50 LTR ERVL 356 682 -113 * 1966 269 23 44 chr2 13132507 13133116 -237554738 + L1M3e LINE L1 466 1061 -6428 3339 237 73 35 chr2 13133161 13134397 -237553457 + L1M3e LINE L1 2008 3196 -4369 1961 136 0 3 chr2 13134397 13134691 -237553163 + AluSc SINE Alu 1 293 -16 3339 237 73 35 chr2 13134691 13135754 -237552100 + L1M3e LINE L1 3196 4405 -3160 539 234 58 47 chr2 13135761 13136035 -237551819 - MER114 LTR ERV -133 515 239 249 298 0 32 chr2 13136095 13136189 -237551665 - MER114 LTR ERV -505 143 53 22 35 0 0 chr2 13136275 13136304 -237551550 + AT_rich Low_complexity Low_complexity 1 29 0 2123 122 0 3 chr2 13136408 13136711 -237551143 - AluSq SINE Alu -11 302 1 416 336 65 70 chr2 13137278 13137694 -237550160 + L1M3e LINE L1 1596 2009 -5477 539 229 0 0 chr2 13137857 13137966 -237549888 - AluJb SINE Alu -203 109 1 521 226 92 0 chr2 13137966 13138130 -237549724 + L1M3e LINE L1 4286 4464 -3101 * 3117 11 0 0 chr2 13138126 13138485 -237549369 - L1PA2 LINE L1 -543 5612 5254 4828 18 0 2 chr2 13138492 13139055 -237548799 + L1PA2 LINE L1 5591 6152 -3 1252 284 26 11 chr2 13139067 13139610 -237548244 + L1M3e LINE L1 4447 4997 -2568 3192 175 42 36 chr2 13139616 13140314 -237547540 + L1MB2 LINE L1 5442 6143 -28 216 67 0 0 chr2 13141935 13141965 -237545889 + (TG)n Simple_repeat Simple_repeat 1 30 0 290 327 48 54 chr2 13142077 13142245 -237545609 - MIR SINE MIR -11 251 85 306 0 0 0 chr2 13142598 13142632 -237545222 + (TG)n Simple_repeat Simple_repeat 2 35 0 847 394 15 0 chr2 13142769 13143170 -237544684 + L2 LINE L2 2438 2844 -470 340 292 44 74 chr2 13143309 13143684 -237544170 + MLT1H1 LTR MaLR 75 506 -49 29 0 0 0 chr2 13143907 13143936 -237543918 + AT_rich Low_complexity Low_complexity 1 29 0 237 365 36 36 chr2 13144858 13145025 -237542829 - MIR SINE MIR -11 251 85 826 263 55 41 chr2 13145208 13145501 -237542353 + L2 LINE L2 2009 2305 -1009 488 326 127 25 chr2 13145517 13145753 -237542101 - LTR16B LTR ERVL -196 268 9 821 297 120 24 chr2 13145761 13146135 -237541719 + L2 LINE L2 2567 2976 -338 205 298 71 77 chr2 13146319 13146487 -237541367 + MIR SINE MIR 25 191 -71 358 114 29 14 chr2 13146841 13146911 -237540943 + CT-rich Low_complexity Low_complexity 3 73 0 1299 152 65 115 chr2 13146921 13147243 -237540611 - AluJb SINE Alu -3 309 4 424 300 92 21 chr2 13148669 13148909 -237538945 + L1MEd LINE L1 27 283 -5836 21 71 0 0 chr2 13149072 13149114 -237538740 + AT_rich Low_complexity Low_complexity 1 42 0 329 289 72 58 chr2 13149688 13149896 -237537958 + MIR SINE MIR 8 218 -44 272 300 75 47 chr2 13150180 13150373 -237537481 - MIR SINE MIR -41 221 19 349 41 20 0 chr2 13150628 13150677 -237537177 - MADE1 DNA Mariner 0 80 31 367 80 0 0 chr2 13150719 13150769 -237537085 + MADE1 DNA Mariner 31 80 0 370 298 41 0 chr2 13150801 13150922 -237536932 - L1MC4 LINE L1 -442 7600 7475 332 115 0 82 chr2 13151188 13151249 -237536605 - MLT2D LTR ERVL 0 414 369 378 224 22 34 chr2 13151256 13151435 -237536419 + (TA)n Simple_repeat Simple_repeat 1 177 0 7456 31 16 0 chr2 13151487 13152480 -237535374 - L1PA4 LINE L1 -3 6152 5156 1832 126 25 7 chr2 13152492 13152777 -237535077 + AluSx SINE Alu 6 295 -17 1015 247 45 17 chr2 13152898 13153190 -237534664 - MLT2D LTR ERVL -114 300 1 1286 24 24 18 chr2 13153532 13153698 -237534156 + L1PA4 LINE L1 5987 6153 -2 1132 234 86 24 chr2 13153933 13154271 -237533583 + MLT2D LTR ERVL 1 359 -55 775 98 40 6 chr2 13154291 13154464 -237533390 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 245 103 0 26 chr2 13154498 13154537 -237533317 + MLT2D LTR ERVL 360 397 0 1042 313 113 44 chr2 13156864 13157609 -237530245 + L2 LINE L2 10 805 -2509 21 36 0 0 chr2 13158154 13158182 -237529672 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 13158420 13158442 -237529412 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr2 13158637 13158670 -237529184 + AT_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr2 13159581 13159626 -237528228 + AT_rich Low_complexity Low_complexity 1 45 0 537 238 7 33 chr2 13159626 13159777 -237528077 - L1MC3 LINE L1 -56 7729 7583 302 132 38 19 chr2 13159772 13159825 -237528029 - L1MC3 LINE L1 -585 7200 7147 * 437 299 16 16 chr2 13159824 13160008 -237527846 + L1M4 LINE L1 2499 2682 -3464 535 228 4 97 chr2 13160137 13160374 -237527480 - L1MCb LINE L1 -3261 3303 3089 420 288 0 14 chr2 13160420 13160559 -237527295 - L1MCb LINE L1 -3629 2935 2799 4634 243 21 45 chr2 13160626 13160749 -237527105 - L1PA13 LINE L1 -2709 4088 3964 1939 156 0 0 chr2 13160749 13161057 -237526797 - AluSg SINE Alu -2 308 1 4634 243 21 45 chr2 13161057 13163485 -237524369 - L1PA13 LINE L1 -2833 3964 1371 774 298 0 14 chr2 13163978 13164193 -237523661 - L1PA13 LINE L1 -6575 212 1 2918 259 60 27 chr2 13164197 13165678 -237522176 - L1MCb LINE L1 -4259 2306 363 2409 117 5 19 chr2 13165678 13166047 -237521807 - THE1B LTR MaLR 0 364 1 2918 259 60 27 chr2 13166047 13166422 -237521432 - L1MCb LINE L1 -6202 363 2 24 0 0 0 chr2 13166507 13166531 -237521323 + AT_rich Low_complexity Low_complexity 1 24 0 360 0 0 0 chr2 13166791 13166831 -237521023 + (CA)n Simple_repeat Simple_repeat 2 41 0 297 0 0 0 chr2 13167173 13167206 -237520648 + (TG)n Simple_repeat Simple_repeat 2 34 0 598 268 46 26 chr2 13167266 13167460 -237520394 + MER20 DNA MER1_type 1 198 -21 1075 292 87 22 chr2 13168489 13168951 -237518903 + L1ME1 LINE L1 21 512 -5911 665 286 26 40 chr2 13169269 13169542 -237518312 + L1ME1 LINE L1 970 1238 -5185 498 307 61 44 chr2 13169580 13170249 -237517605 + L1ME1 LINE L1 1367 2217 -4724 313 294 159 19 chr2 13170261 13170570 -237517284 + L1ME1 LINE L1 2382 2733 -4389 599 274 89 23 chr2 13170714 13171068 -237516786 + L1ME1 LINE L1 2904 3248 -3693 2331 57 7 3 chr2 13171068 13171366 -237516488 - AluY SINE Alu -12 299 1 599 274 89 23 chr2 13171366 13171426 -237516428 + L1ME1 LINE L1 3248 3303 -3638 1756 252 70 51 chr2 13171433 13172981 -237514873 + L1ME1 LINE L1 5178 6750 -211 29 90 0 0 chr2 13173751 13173829 -237514025 + AT_rich Low_complexity Low_complexity 1 78 0 386 118 0 26 chr2 13175991 13176067 -237511787 + (TTCCC)n Simple_repeat Simple_repeat 1 74 0 1915 129 10 26 chr2 13176067 13176369 -237511485 - AluSx SINE Alu -15 297 1 2029 147 39 0 chr2 13177168 13177502 -237510352 - MER7A DNA MER2_type 0 346 2 22 0 0 0 chr2 13178006 13178028 -237509826 + AT_rich Low_complexity Low_complexity 1 22 0 344 291 129 43 chr2 13178849 13179059 -237508795 + HAL1 LINE L1 1425 1652 -855 28 29 0 0 chr2 13179276 13179311 -237508543 + AT_rich Low_complexity Low_complexity 1 35 0 321 332 89 59 chr2 13179526 13179797 -237508057 + L2 LINE L2 3031 3309 -4 228 237 0 52 chr2 13179898 13179995 -237507859 + A-rich Low_complexity Low_complexity 6 97 0 944 271 66 11 chr2 13180010 13180360 -237507494 + L1MCb LINE L1 36 404 -5641 633 194 129 16 chr2 13180371 13180645 -237507209 + L1MC3 LINE L1 5180 5481 -761 333 51 67 67 chr2 13180723 13180901 -237506953 + (TA)n Simple_repeat Simple_repeat 2 179 0 523 23 35 23 chr2 13181018 13181105 -237506749 + (TA)n Simple_repeat Simple_repeat 1 88 0 4525 220 27 15 chr2 13181106 13181450 -237506404 + L1MC3 LINE L1 5488 5827 -1958 4009 57 0 6 chr2 13181450 13181960 -237505894 + L1PA6 LINE L1 5648 6154 0 4525 220 27 15 chr2 13181960 13182733 -237505121 + L1MC3 LINE L1 5827 6618 -1167 498 147 0 0 chr2 13183399 13183474 -237504380 + AluSg/x SINE Alu 211 285 -27 507 331 39 33 chr2 13183535 13183953 -237503901 + L1MC/D LINE L1 5317 5744 -506 23 0 0 0 chr2 13184187 13184210 -237503644 + AT_rich Low_complexity Low_complexity 1 23 0 5355 162 21 26 chr2 13184212 13184790 -237503064 - L1MA4 LINE L1 -9 6291 5712 2211 73 4 0 chr2 13184790 13185064 -237502790 + AluY SINE Alu 21 295 -16 5355 162 21 26 chr2 13185064 13186194 -237501660 - L1MA4 LINE L1 -588 5712 4386 21 89 0 0 chr2 13186203 13186259 -237501595 + AT_rich Low_complexity Low_complexity 1 56 0 198 138 58 11 chr2 13186260 13186347 -237501507 + (TATAA)n Simple_repeat Simple_repeat 2 92 0 38 51 0 0 chr2 13186351 13186410 -237501444 + AT_rich Low_complexity Low_complexity 1 59 0 3322 156 36 21 chr2 13186410 13187040 -237500814 - L1MA4 LINE L1 -1754 4392 3753 852 167 5 31 chr2 13187060 13187282 -237500572 + SVA Other Other 461 676 -710 751 201 34 130 chr2 13187421 13187701 -237500153 + MLT1A1 LTR MaLR 74 321 -44 1654 158 49 38 chr2 13187701 13188069 -237499785 + THE1C LTR MaLR 4 375 0 751 201 34 130 chr2 13188069 13188111 -237499743 + MLT1A1 LTR MaLR 321 365 0 1498 189 50 15 chr2 13188116 13188455 -237499399 + L1MC3 LINE L1 7411 7761 -24 4253 255 65 21 chr2 13189283 13190084 -237497770 + L1MDa LINE L1 510 1400 -5140 3921 61 0 0 chr2 13190084 13190577 -237497277 + L1PA5 LINE L1 5662 6154 0 4253 255 65 21 chr2 13190577 13191181 -237496673 + L1MDa LINE L1 1400 1976 -4564 1537 190 3 10 chr2 13191210 13191395 -237496459 - AluY SINE Alu 0 311 127 303 28 0 0 chr2 13191395 13191431 -237496423 + (TG)n Simple_repeat Simple_repeat 1 36 0 1537 190 3 10 chr2 13191431 13191545 -237496309 - AluY SINE Alu -184 127 14 2037 224 75 45 chr2 13191652 13192016 -237495838 + L1MD2 LINE L1 1614 1965 -4575 2345 78 16 0 chr2 13192016 13192197 -237495657 - AluY SINE Alu 0 311 121 369 0 0 0 chr2 13192197 13192238 -237495616 + (TG)n Simple_repeat Simple_repeat 2 42 0 2345 78 16 0 chr2 13192238 13192362 -237495492 - AluY SINE Alu -190 121 1 2037 224 75 45 chr2 13192362 13192780 -237495074 + L1MD2 LINE L1 1965 2420 -4120 1702 187 9 3 chr2 13192791 13193128 -237494726 - L1P LINE L1 -1352 4794 4456 4833 180 13 33 chr2 13193129 13193577 -237494277 + L1PA16 LINE L1 4924 5380 -786 2274 74 6 19 chr2 13193577 13193888 -237493966 + AluY SINE Alu 1 307 -4 4833 180 13 33 chr2 13193888 13194697 -237493157 + L1PA16 LINE L1 5380 6166 0 21 0 0 0 chr2 13194724 13194745 -237493109 + AT_rich Low_complexity Low_complexity 1 21 0 1287 261 92 5 chr2 13194757 13195442 -237492412 + L1MD2 LINE L1 2453 3204 -3336 258 250 0 42 chr2 13195442 13195514 -237492340 + AluYa8 SINE Alu 116 184 -116 4634 252 72 60 chr2 13195519 13197243 -237490611 + L1MD2 LINE L1 3540 5242 -1511 1520 229 37 0 chr2 13197243 13197593 -237490261 + MLT1A1 LTR MaLR 3 365 0 4634 252 72 60 chr2 13197593 13198614 -237489240 + L1MD2 LINE L1 5242 6249 -504 252 77 0 0 chr2 13198614 13198653 -237489201 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 3729 16 0 5 chr2 13198656 13199086 -237488768 - L1PA3 LINE L1 -15 6140 5713 4634 252 72 60 chr2 13199086 13199468 -237488386 + L1MD2 LINE L1 6250 6732 -21 1683 241 21 58 chr2 13199694 13200213 -237487641 + MLT1D LTR MaLR 6 505 0 284 224 9 93 chr2 13201156 13201263 -237486591 + MLT1J2 LTR MaLR 350 447 -3 194 253 72 12 chr2 13201266 13201349 -237486505 - L2 LINE L2 -1081 2233 2146 21 57 0 0 chr2 13201948 13201983 -237485871 + AT_rich Low_complexity Low_complexity 1 35 0 182 371 131 11 chr2 13202831 13203006 -237484848 - MIR SINE MIR -10 252 57 3890 224 50 15 chr2 13203928 13205400 -237482454 + L1MC2 LINE L1 4593 6120 -224 30 45 0 0 chr2 13205615 13205659 -237482195 + AT_rich Low_complexity Low_complexity 1 44 0 7080 35 0 1 chr2 13205677 13206535 -237481319 - L1PA4 LINE L1 -4 6151 5295 * 14074 25 1 0 chr2 13206530 13208205 -237479649 + L1PA4 LINE L1 3620 5295 -851 23 0 0 0 chr2 13208212 13208235 -237479619 + AT_rich Low_complexity Low_complexity 1 23 0 2204 95 3 0 chr2 13208849 13209143 -237478711 + AluSx SINE Alu 1 295 -17 269 262 184 0 chr2 13209285 13209388 -237478466 + L2 LINE L2 3187 3308 -5 2868 215 5 67 chr2 13209817 13210553 -237477301 - LTR8 LTR ERV1 0 691 1 901 261 5 9 chr2 13212848 13213059 -237474795 - LTR28 LTR ERV1 -324 696 487 235 47 0 47 chr2 13213060 13213103 -237474751 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 7255 31 16 2 chr2 13213103 13214450 -237473404 - L1PA3 LINE L1 -24 6131 4765 786 247 187 28 chr2 13214473 13214827 -237473027 - LTR28 LTR ERV1 -649 371 1 1469 162 23 5 chr2 13214830 13215150 -237472704 - LTR28-int LTR ERV1 -4 7087 4918 8026 150 45 6 chr2 13215151 13216468 -237471386 + THE1C-int LTR MaLR 212 1579 -1 1883 143 67 17 chr2 13216470 13216827 -237471027 + THE1C LTR MaLR 1 375 0 13636 160 36 25 chr2 13216827 13220652 -237467202 - MER52-int LTR ERV1 -524 5422 632 393 204 0 45 chr2 13220673 13220761 -237467093 - MER52-int LTR ERV1 -885 3995 3912 4272 211 27 70 chr2 13220771 13221945 -237465909 - MER52-int LTR ERV1 -440 4777 548 535 189 104 67 chr2 13221942 13222106 -237465748 - MER52-int LTR ERV1 -6516 575 406 * 544 269 96 56 chr2 13222093 13222342 -237465512 - MER52-int LTR ERV1 -6832 259 1 875 278 23 23 chr2 13222390 13222653 -237465201 - LTR28 LTR ERV1 -316 704 442 573 208 13 47 chr2 13222789 13222938 -237464916 - LTR28 LTR ERV1 -874 146 3 248 252 141 0 chr2 13223162 13223243 -237464611 - MIR SINE MIR -94 114 35 1856 40 0 0 chr2 13225977 13226200 -237461654 - L1PA4 LINE L1 -13 6142 5920 197 379 115 21 chr2 13226626 13226861 -237460993 + MIR SINE MIR 5 261 -1 239 203 125 16 chr2 13227613 13227677 -237460177 + L2 LINE L2 3015 3085 -187 1483 276 82 19 chr2 13228220 13228765 -237459089 - L1ME3 LINE L1 -6 6156 5566 1610 182 13 23 chr2 13228765 13229072 -237458782 + AluJb SINE Alu 1 304 -8 1483 276 82 19 chr2 13229072 13229152 -237458702 - L1ME3 LINE L1 -596 5566 5492 427 214 55 41 chr2 13229229 13229374 -237458480 - L1ME1 LINE L1 -18 6148 6002 11999 245 32 14 chr2 13229376 13234192 -237453662 - L1PA16 LINE L1 -285 7319 2449 243 0 0 0 chr2 13234192 13234219 -237453635 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 11999 245 32 14 chr2 13234219 13234495 -237453359 - L1PA16 LINE L1 -5155 2449 2179 373 274 0 0 chr2 13234622 13234728 -237453126 - L1ME3 LINE L1 -885 5474 5369 24 32 0 0 chr2 13235054 13235085 -237452769 + AT_rich Low_complexity Low_complexity 1 31 0 3349 187 16 14 chr2 13236520 13237214 -237450640 + L1P LINE L1 3219 3913 -2233 202 297 184 43 chr2 13237323 13237508 -237450346 - MIR SINE MIR -3 259 49 485 266 29 29 chr2 13237718 13237891 -237449963 - L2 LINE L2 0 3313 3141 1477 299 72 46 chr2 13237935 13239195 -237448659 + L1MCc LINE L1 -498 727 -5689 1662 236 27 42 chr2 13239195 13239669 -237448185 + MLT1C LTR MaLR 1 467 0 1477 299 72 46 chr2 13239669 13239947 -237447907 + L1MCc LINE L1 727 996 -5420 420 20 0 0 chr2 13239947 13239996 -237447858 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 1477 299 72 46 chr2 13239996 13240025 -237447829 + L1MCc LINE L1 996 1433 -4983 23 54 0 0 chr2 13240034 13240071 -237447783 + AT_rich Low_complexity Low_complexity 1 37 0 428 234 61 8 chr2 13240243 13240403 -237447451 + L1MCc LINE L1 1710 1825 -4601 4807 154 9 4 chr2 13240403 13241669 -237446185 - L1PA16 LINE L1 -3 6163 4873 2892 226 56 5 chr2 13241691 13242260 -237445594 - L1P LINE L1 -1158 4988 4370 192 77 0 0 chr2 13242260 13242286 -237445568 + (TG)n Simple_repeat Simple_repeat 2 27 0 2892 226 56 5 chr2 13242286 13242472 -237445382 - L1P LINE L1 -1776 4370 4195 704 298 91 14 chr2 13242466 13242980 -237444874 + L1MCc LINE L1 1928 2481 -4126 * 328 284 31 53 chr2 13243001 13243226 -237444628 + L1MCc LINE L1 2727 2946 -3480 1652 192 7 10 chr2 13243330 13243622 -237444232 - AluJb SINE Alu -12 300 10 2280 143 6 19 chr2 13243622 13243987 -237443867 - THE1B LTR MaLR -2 362 3 9083 119 107 2 chr2 13243989 13245419 -237442435 - THE1B-int LTR MaLR 0 1580 1 2055 139 21 48 chr2 13245419 13245793 -237442061 - THE1B LTR MaLR 0 364 1 745 261 62 12 chr2 13245809 13246134 -237441720 + L1MCc LINE L1 3031 3371 -3055 735 228 54 0 chr2 13246134 13246301 -237441553 + LTR47A LTR ERVL 277 452 0 266 302 79 22 chr2 13246317 13246456 -237441398 + LTR47A-int LTR ERVL 15 161 -5182 470 236 6 67 chr2 13246643 13246808 -237441046 + HERV17 LTR ERV1 2131 2285 -2595 2291 249 62 23 chr2 13246832 13247530 -237440324 - MER50 LTR ERV1 0 734 10 775 256 26 64 chr2 13247537 13247909 -237439945 + HERV17 LTR ERV1 1948 2397 -3549 440 211 85 13 chr2 13247907 13248020 -237439834 + HERV17 LTR ERV1 2538 2911 -3352 * 538 191 176 15 chr2 13248029 13248165 -237439689 + MER34C LTR ERV1 160 317 -268 273 103 0 0 chr2 13248165 13248204 -237439650 + HERV17 LTR ERV1 1197 1235 -3888 2714 143 41 12 chr2 13248223 13248740 -237439114 + HERV17 LTR ERV1 1072 1603 -6213 404 148 49 12 chr2 13248740 13248821 -237439033 + MER4A LTR ERV1 1 84 -580 547 186 9 3 chr2 13248821 13248935 -237438919 - LTR10E LTR ERV1 0 590 402 2406 204 80 95 chr2 13248967 13249894 -237437960 + HERV17 LTR ERV1 26 938 -5711 1165 124 81 15 chr2 13249887 13250294 -237437560 + HERV17 LTR ERV1 709 2694 -3955 * 711 287 0 6 chr2 13250285 13250466 -237437388 + HERV17 LTR ERV1 3138 3317 -4468 * 4038 158 32 41 chr2 13250446 13251504 -237436350 + HERV17 LTR ERV1 956 3447 -3202 328 244 171 0 chr2 13251509 13251591 -237436263 - LTR8 LTR ERV1 -438 253 158 2196 79 47 0 chr2 13251591 13251931 -237435923 + MER57-int LTR ERV1 1810 2165 -4731 2505 173 10 5 chr2 13252024 13252561 -237435293 + MER57-int LTR ERV1 2567 4823 -1826 3346 206 0 5 chr2 13252571 13253158 -237434696 + MER57-int LTR ERV1 3376 3959 -2937 2200 162 17 33 chr2 13253317 13253872 -237433982 + LTR10E LTR ERV1 1 602 0 785 156 5 64 chr2 13253891 13254102 -237433752 + MER4A LTR ERV1 261 517 -147 2245 125 91 24 chr2 13254104 13254145 -237433709 + MER57-int LTR ERV1 1791 1828 -5988 3207 80 2 2 chr2 13254145 13254572 -237433282 - LTR3 LTR ERVK -2 427 1 2245 125 91 24 chr2 13254572 13255025 -237432829 + MER57-int LTR ERV1 1828 2318 -5498 3463 123 45 72 chr2 13255026 13255718 -237432136 + MER57-int LTR ERV1 2868 3540 -4276 2439 191 28 2 chr2 13255719 13256149 -237431705 - LTR8 LTR ERV1 -250 441 1 11520 139 30 73 chr2 13256149 13257286 -237430568 + MER57-int LTR ERV1 3073 4258 -3160 1758 118 50 4 chr2 13257286 13257571 -237430283 + AluSx SINE Alu 11 307 0 11520 139 30 73 chr2 13257571 13258349 -237429505 + MER57-int LTR ERV1 4258 4866 -2552 2153 132 3 0 chr2 13258349 13258659 -237429195 + AluSp SINE Alu 1 311 -2 11520 139 30 73 chr2 13258659 13259148 -237428706 + MER57-int LTR ERV1 4866 5375 -2043 3932 118 38 12 chr2 13259147 13259874 -237427980 + MER57-int LTR ERV1 5249 6223 -1593 * 381 93 0 0 chr2 13259979 13260033 -237427821 + (TG)n Simple_repeat Simple_repeat 1 54 0 341 363 45 5 chr2 13260488 13260689 -237427165 - MIR SINE MIR -3 259 51 2072 128 0 24 chr2 13261500 13261798 -237426056 - AluSx SINE Alu -21 291 1 21 0 0 0 chr2 13262403 13262424 -237425430 + AT_rich Low_complexity Low_complexity 1 21 0 190 328 0 0 chr2 13262763 13262824 -237425030 + MIR SINE MIR 172 232 -30 234 275 50 12 chr2 13263310 13263390 -237424464 + MIR SINE MIR 132 214 -48 2581 118 3 0 chr2 13263449 13263812 -237424042 + THE1B LTR MaLR 1 364 0 27 73 0 0 chr2 13264950 13265005 -237422849 + AT_rich Low_complexity Low_complexity 1 55 0 237 180 62 47 chr2 13265154 13265282 -237422572 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 * 344 182 85 0 chr2 13265234 13265399 -237422455 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 347 182 45 28 chr2 13265293 13265469 -237422385 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 32 0 0 0 chr2 13265469 13265501 -237422353 + AT_rich Low_complexity Low_complexity 1 32 0 259 234 29 29 chr2 13265504 13265675 -237422179 + (TTATA)n Simple_repeat Simple_repeat 5 175 0 * 360 207 59 6 chr2 13265664 13265833 -237422021 + (TA)n Simple_repeat Simple_repeat 2 179 0 296 289 50 69 chr2 13265924 13266083 -237421771 + MIR SINE MIR 36 191 -71 238 291 64 73 chr2 13266415 13266525 -237421329 - L2 LINE L2 0 3272 3164 351 44 0 0 chr2 13268716 13268761 -237419093 + (CA)n Simple_repeat Simple_repeat 2 46 0 2386 74 3 13 chr2 13268932 13269243 -237418611 + AluY SINE Alu 3 310 -1 283 294 20 0 chr2 13269443 13269545 -237418309 + L1MCb LINE L1 1 104 -5941 617 230 24 38 chr2 13269563 13269776 -237418078 + L1MCb LINE L1 1560 1769 -4795 654 250 11 44 chr2 13269781 13269961 -237417893 - MIR SINE MIR -87 175 2 280 226 145 0 chr2 13270864 13270926 -237416928 + MER69 DNA AcHobo 4 74 -2452 787 279 9 9 chr2 13271022 13271237 -237416617 + MER20 DNA MER1_type 1 215 -4 1899 123 44 82 chr2 13271283 13271673 -237416181 + THE1C LTR MaLR 1 375 0 21 36 0 0 chr2 13271931 13271959 -237415895 + AT_rich Low_complexity Low_complexity 1 28 0 333 47 0 0 chr2 13273061 13273104 -237414750 + (TG)n Simple_repeat Simple_repeat 2 44 0 183 348 99 51 chr2 13274878 13275211 -237412643 + L3b LINE CR1 1104 1452 -131 745 154 0 0 chr2 13276347 13276470 -237411384 - AluSc SINE Alu -22 287 165 995 268 100 12 chr2 13277147 13277487 -237410367 + MLT1B LTR MaLR 1 370 -20 886 81 81 0 chr2 13277670 13277794 -237410060 + MER85 DNA T2_type 1 134 -5 251 221 63 16 chr2 13278261 13278388 -237409466 + (CATATA)n Simple_repeat Simple_repeat 5 137 0 23 0 0 0 chr2 13278478 13278501 -237409353 + AT_rich Low_complexity Low_complexity 1 23 0 202 371 77 21 chr2 13279369 13279512 -237408342 + MIR SINE MIR 91 241 -21 1044 181 160 0 chr2 13280160 13280398 -237407456 + MLT2D LTR ERVL 1 276 -138 1190 216 0 0 chr2 13280398 13280625 -237407229 + ERVL-D LTR ERVL 882 1108 -4656 5477 162 38 22 chr2 13280649 13281676 -237406178 + ERVL-D LTR ERVL 4715 5757 -7 983 137 0 0 chr2 13281676 13281822 -237406032 + MLT2D LTR ERVL 1 146 -268 1298 176 117 0 chr2 13281823 13282062 -237405792 - MLT1A1 LTR MaLR 0 365 99 182 355 45 32 chr2 13283336 13283491 -237404363 - L2 LINE L2 -179 3093 2937 28 48 0 0 chr2 13284215 13284257 -237403597 + AT_rich Low_complexity Low_complexity 1 42 0 2172 78 3 7 chr2 13285122 13285467 -237402387 - AluY SINE Alu 0 344 1 220 281 0 0 chr2 13286373 13286430 -237401424 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 192 238 0 0 chr2 13286434 13286497 -237401357 + (TG)n Simple_repeat Simple_repeat 2 64 0 24 32 0 0 chr2 13286644 13286675 -237401179 + AT_rich Low_complexity Low_complexity 1 31 0 874 153 0 0 chr2 13286889 13287020 -237400834 - FLAM_C SINE Alu -2 131 1 1637 210 21 0 chr2 13287138 13287472 -237400382 - MER58B DNA MER1_type 0 341 1 1038 197 14 10 chr2 13288147 13288355 -237399499 + MER2 DNA MER2_type 3 211 -134 34 0 0 0 chr2 13288656 13288690 -237399164 + AT_rich Low_complexity Low_complexity 1 34 0 29 28 0 0 chr2 13288744 13288780 -237399074 + AT_rich Low_complexity Low_complexity 1 36 0 23 54 0 0 chr2 13289408 13289445 -237398409 + AT_rich Low_complexity Low_complexity 1 37 0 7437 34 2 0 chr2 13289803 13291016 -237396838 - L1PA4 LINE L1 0 6155 4941 10629 37 8 1 chr2 13291016 13292334 -237395520 + L1P LINE L1 2935 4262 -1884 2458 143 61 15 chr2 13292502 13292671 -237395183 + LTR1B LTR ERV1 1 161 -665 2042 153 30 33 chr2 13292671 13293036 -237394818 - THE1B LTR MaLR 0 364 1 2458 143 61 15 chr2 13293036 13293613 -237394241 + LTR1B LTR ERV1 161 826 0 216 0 0 0 chr2 13294037 13294061 -237393793 + (TG)n Simple_repeat Simple_repeat 2 25 0 230 360 10 10 chr2 13294176 13294276 -237393578 + MLT1L LTR MaLR 432 531 -84 21 0 0 0 chr2 13296870 13296891 -237390963 + AT_rich Low_complexity Low_complexity 1 21 0 454 317 124 16 chr2 13296969 13297218 -237390636 + MER110-int LTR ERV1 159 434 -4213 255 164 60 30 chr2 13298977 13299044 -237388810 - MADE1 DNA Mariner -11 69 1 253 125 0 0 chr2 13300363 13300403 -237387451 - Alu SINE Alu -10 291 252 * 453 197 6 142 chr2 13300398 13300581 -237387273 - MER99 DNA DNA -478 350 193 1648 206 9 24 chr2 13300895 13301234 -237386620 - MLT1A1 LTR MaLR -13 352 19 353 259 89 51 chr2 13301241 13301399 -237386455 + MIR SINE MIR 91 254 -8 21 0 0 0 chr2 13301912 13301933 -237385921 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 13302151 13302180 -237385674 + AT_rich Low_complexity Low_complexity 1 29 0 650 248 100 19 chr2 13302242 13302452 -237385402 - MER89 LTR ERV1 -5 554 328 2974 151 41 12 chr2 13302456 13303042 -237384812 + MER4B LTR ERV1 1 769 -10 443 247 45 0 chr2 13303051 13303259 -237384595 - MER89 LTR ERV1 -233 326 11 22 80 0 0 chr2 13303395 13303445 -237384409 + AT_rich Low_complexity Low_complexity 1 50 0 3568 168 39 16 chr2 13303678 13304388 -237383466 - LTR8A LTR ERV1 0 727 1 42507 36 24 1 chr2 13304607 13310621 -237377233 - L1PA3 LINE L1 0 6155 1 197 126 87 10 chr2 13310967 13311070 -237376784 + (TA)n Simple_repeat Simple_repeat 1 111 0 287 347 57 0 chr2 13311103 13311227 -237376627 - L2 LINE L2 -2 3270 3140 1851 163 39 33 chr2 13311227 13311589 -237376265 + THE1B LTR MaLR 1 364 0 11009 117 10 0 chr2 13311589 13313153 -237374701 + THE1B-int LTR MaLR 1 1580 0 1643 181 47 33 chr2 13313153 13313512 -237374342 + THE1B LTR MaLR 1 364 0 436 146 101 0 chr2 13313541 13313630 -237374224 + MER4A LTR ERV1 1 98 -566 1788 107 161 83 chr2 13313630 13314003 -237373851 + MER4A LTR ERV1 261 662 -2 2477 121 72 34 chr2 13314008 13314555 -237373299 + MER4A-int LTR ERV1 1 612 -5986 385 143 0 43 chr2 13314549 13314619 -237373235 + MER4A-int LTR ERV1 733 799 -5799 * 311 137 0 0 chr2 13314689 13314740 -237373114 + MER4A-int LTR ERV1 836 886 -5712 * 1129 93 164 52 chr2 13314738 13315043 -237372811 + MER4A-int LTR ERV1 518 749 -4266 3908 97 55 21 chr2 13315075 13315745 -237372109 + MER4A-int LTR ERV1 1803 2495 -4103 1248 184 57 4 chr2 13315745 13315989 -237371865 - LTR8 LTR ERV1 -434 257 1 1159 133 0 9 chr2 13315989 13316207 -237371647 + MER4A-int LTR ERV1 2737 2952 -3646 22160 121 11 17 chr2 13316216 13321218 -237366636 + L1P3 LINE L1 10 5041 -1420 7306 28 1 0 chr2 13321218 13322116 -237365738 + L1PA3 LINE L1 5283 6183 0 375 208 0 0 chr2 13322116 13322188 -237365666 + MER4A-int LTR ERV1 2150 2221 -4537 215 59 0 29 chr2 13322193 13322227 -237365627 + (TA)n Simple_repeat Simple_repeat 2 34 0 6114 127 41 17 chr2 13322257 13323336 -237364518 + MER4A-int LTR ERV1 3921 5025 -1573 5588 117 63 38 chr2 13323338 13324355 -237363499 + MER4A-int LTR ERV1 5557 6598 0 453 167 89 0 chr2 13324356 13324446 -237363408 + MER4A LTR ERV1 1 98 -566 1552 133 42 75 chr2 13324446 13324803 -237363051 + MER4A LTR ERV1 261 664 0 288 337 98 10 chr2 13325722 13325915 -237361939 + MIR SINE MIR 53 262 0 1183 251 85 6 chr2 13326549 13326879 -237360975 - MLT1A2 LTR MaLR 0 374 19 21 0 0 0 chr2 13327176 13327197 -237360657 + AT_rich Low_complexity Low_complexity 1 21 0 621 272 42 33 chr2 13327582 13327795 -237360059 + MIR SINE MIR 2 216 -46 365 330 115 18 chr2 13327818 13328036 -237359818 - L2 LINE L2 -70 3243 3005 222 267 42 91 chr2 13328043 13328208 -237359646 - L2 LINE L2 -520 2794 2638 322 214 179 0 chr2 13328560 13328644 -237359210 - L1MD2 LINE L1 -55 6304 6206 352 300 0 18 chr2 13328655 13328765 -237359089 - L1MD2 LINE L1 -214 6145 6038 891 213 51 94 chr2 13328775 13328880 -237358974 - L1M4 LINE L1 -3136 3010 2902 1103 210 90 26 chr2 13328880 13329223 -237358631 - MLT1A1 LTR MaLR 0 365 1 891 213 51 94 chr2 13329223 13329488 -237358366 - L1M4 LINE L1 -3244 2902 2656 495 271 135 35 chr2 13331200 13331488 -237356366 - MER110A LTR ERV1 -81 387 71 246 155 31 216 chr2 13332234 13332331 -237355523 - MLT1E2 LTR MaLR -537 89 11 2268 79 0 16 chr2 13332472 13332788 -237355066 - AluY SINE Alu 0 311 1 640 302 67 62 chr2 13332841 13333349 -237354505 + L1ME LINE L1 20 533 -5537 240 111 0 0 chr2 13333349 13333385 -237354469 + (CAT)n Simple_repeat Simple_repeat 2 37 0 640 302 67 62 chr2 13333385 13333443 -237354411 + L1ME LINE L1 533 589 -5481 1985 112 0 11 chr2 13333517 13333846 -237354008 + AluSx SINE Alu 1 326 0 1455 287 22 6 chr2 13334101 13334589 -237353265 + L1M4 LINE L1 3330 3825 -2321 919 244 128 24 chr2 13334666 13335251 -237352603 + L1ME LINE L1 2562 3207 -2873 1119 273 70 52 chr2 13335258 13336015 -237351839 + L1ME1 LINE L1 2785 3555 -2525 1030 266 105 6 chr2 13336017 13336340 -237351514 + L1ME1 LINE L1 3702 4056 -2024 1372 273 31 33 chr2 13336446 13336995 -237350859 + L1ME1 LINE L1 5550 6097 -3 2096 253 68 19 chr2 13339400 13340334 -237347520 + MER45B DNA AcHobo 33 1040 0 1175 240 0 91 chr2 13340330 13340672 -237347182 + MER77 LTR ERV1 1 311 -294 * 840 231 16 0 chr2 13340658 13340840 -237347014 + MER77 LTR ERV1 421 605 0 * 662 200 53 129 chr2 13340996 13341336 -237346518 - L1M4 LINE L1 -869 5513 5200 450 127 0 0 chr2 13341338 13341409 -237346445 + (TCC)n Simple_repeat Simple_repeat 3 73 0 800 245 51 15 chr2 13342324 13342520 -237345334 + L1MDa LINE L1 75 277 -6263 260 247 0 27 chr2 13342523 13342596 -237345258 + A-rich Low_complexity Low_complexity 2 72 0 9521 189 57 61 chr2 13342626 13342814 -237345040 - L1M4 LINE L1 -3899 2485 2298 1820 99 88 0 chr2 13342814 13343077 -237344777 - AluSq SINE Alu -13 300 15 362 62 0 0 chr2 13343077 13343125 -237344729 - Alu SINE Alu -254 48 1 9521 189 57 61 chr2 13343125 13345360 -237342494 - L1M4 LINE L1 -4084 2300 24 1752 91 4 8 chr2 13345437 13345678 -237342176 - AluSg/x SINE Alu -7 305 66 444 290 19 26 chr2 13345807 13345962 -237341892 + MIR SINE MIR 103 256 -6 462 287 20 20 chr2 13346236 13346480 -237341374 + L1MDa LINE L1 2188 2431 -4111 2187 65 0 49 chr2 13346782 13347089 -237340765 - AluY SINE Alu -19 292 1 284 188 0 0 chr2 13347691 13347739 -237340115 - LTR22A LTR ERVK 0 458 411 216 162 27 0 chr2 13348570 13348607 -237339247 - L2 LINE L2 -9 3304 3267 219 387 45 67 chr2 13348989 13349614 -237338240 - L2 LINE L2 -458 2856 2246 1522 191 33 60 chr2 13350731 13351097 -237336757 - MLT1B LTR MaLR 0 390 35 364 148 2 68 chr2 13351200 13351289 -237336565 + Alu SINE Alu 234 302 0 194 301 84 48 chr2 13352342 13352425 -237335429 + L2 LINE L2 3228 3313 0 185 280 80 50 chr2 13353113 13353213 -237334641 + L2 LINE L2 2753 2855 -459 2186 108 0 0 chr2 13353346 13353642 -237334212 - AluSp SINE Alu -11 302 7 186 43 0 0 chr2 13354003 13354026 -237333828 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr2 13354492 13354513 -237333341 + AT_rich Low_complexity Low_complexity 1 21 0 4297 156 38 7 chr2 13355149 13355914 -237331940 - Tigger3(Golem) DNA MER2_type -1 3028 2240 514 257 28 0 chr2 13355912 13356021 -237331833 - Tigger3(Golem) DNA MER2_type -2917 112 1 * 22 35 0 0 chr2 13356114 13356143 -237331711 + AT_rich Low_complexity Low_complexity 1 29 0 405 155 0 56 chr2 13358654 13358725 -237329129 - AluJ/FRAM SINE Alu -20 292 226 189 340 116 14 chr2 13358749 13358896 -237328958 - L2 LINE L2 -977 2337 2176 32 43 0 0 chr2 13359103 13359149 -237328705 + AT_rich Low_complexity Low_complexity 1 46 0 2658 259 83 12 chr2 13359540 13360114 -237327740 + L1MC1 LINE L1 4431 4963 -1370 2034 94 14 0 chr2 13360114 13360400 -237327454 + AluY SINE Alu 1 290 -21 2658 259 83 12 chr2 13360400 13361488 -237326366 + L1MC1 LINE L1 4963 6272 -61 2118 268 37 51 chr2 13361591 13363351 -237324503 + L1M4c LINE L1 23 1924 -4460 1517 210 35 24 chr2 13363524 13363895 -237323959 - MLT1-int LTR MaLR -45 1326 952 311 379 21 7 chr2 13364086 13364231 -237323623 + MIR SINE MIR 8 154 -108 258 336 62 34 chr2 13364764 13364910 -237322944 + MIR SINE MIR 20 169 -93 1021 249 62 24 chr2 13366407 13366744 -237321110 - L1MD2 LINE L1 -19 6340 5991 249 159 0 0 chr2 13366761 13366805 -237321049 - L1M4 LINE L1 -1588 4558 4515 11528 175 25 20 chr2 13366839 13367119 -237320735 - L1 LINE L1 -2646 4919 4642 2068 117 0 0 chr2 13367119 13367410 -237320444 - AluSc SINE Alu -18 291 1 11528 175 25 20 chr2 13367410 13370375 -237317479 - L1 LINE L1 -2923 4642 1688 30 45 0 0 chr2 13370491 13370535 -237317319 + AT_rich Low_complexity Low_complexity 1 44 0 184 375 0 11 chr2 13370977 13371065 -237316789 - MIR SINE MIR -122 140 54 1905 147 0 3 chr2 13371164 13371456 -237316398 + AluSq SINE Alu 2 292 -21 957 120 0 0 chr2 13371476 13371609 -237316245 + AluSg/x SINE Alu 169 301 -11 714 129 0 4 chr2 13373173 13373288 -237314566 - LTR12 LTR ERV1 0 714 175 306 263 20 10 chr2 13373290 13373389 -237314465 - LTR30 LTR ERV1 -79 643 544 579 213 155 24 chr2 13373389 13373596 -237314258 - LTR12 LTR ERV1 -437 277 44 227 209 0 0 chr2 13373596 13373639 -237314215 - LTR30 LTR ERV1 -679 43 1 367 307 49 79 chr2 13373714 13374180 -237313674 + L2 LINE L2 1938 2389 -925 223 350 56 49 chr2 13374203 13374346 -237313508 + L2 LINE L2 2551 2694 -620 1037 201 23 9 chr2 13374409 13374628 -237313226 + MLT1C LTR MaLR 3 224 -243 730 176 34 128 chr2 13374650 13374782 -237313072 + MER2 DNA MER2_type 8 116 -229 1852 125 3 26 chr2 13374782 13375085 -237312769 - AluSx SINE Alu -16 296 1 730 176 34 128 chr2 13375085 13375156 -237312698 + MER2 DNA MER2_type 116 192 -153 679 234 160 5 chr2 13375200 13375388 -237312466 + MLT1C LTR MaLR 250 466 -1 24 0 0 0 chr2 13377457 13377481 -237310373 + AT_rich Low_complexity Low_complexity 1 24 0 315 288 144 8 chr2 13377704 13377829 -237310025 + MIR SINE MIR 121 262 0 229 331 141 0 chr2 13378628 13378749 -237309105 - L2 LINE L2 -4 3309 3172 9162 31 1 1 chr2 13378793 13379896 -237307958 - L1PA3 LINE L1 -1909 4237 3135 9767 25 1 0 chr2 13379896 13381832 -237306022 + L1PA3 LINE L1 4223 6162 0 29 94 0 0 chr2 13381873 13381958 -237305896 + AT_rich Low_complexity Low_complexity 1 85 0 219 129 0 48 chr2 13384039 13384101 -237303753 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 989 208 11 0 chr2 13384231 13384414 -237303440 - MER5A DNA MER1_type -3 186 2 1627 181 178 6 chr2 13384567 13384932 -237302922 + MSTA LTR MaLR 1 428 0 216 287 69 23 chr2 13384963 13385050 -237302804 + MIR3 SINE MIR 64 154 -54 22 0 0 0 chr2 13385423 13385445 -237302409 + AT_rich Low_complexity Low_complexity 1 22 0 422 306 37 50 chr2 13385479 13385721 -237302133 + L2 LINE L2 3075 3313 0 225 0 0 0 chr2 13385807 13385832 -237302022 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 385 275 80 55 chr2 13386268 13386468 -237301386 + MIR SINE MIR 56 260 -2 208 333 16 0 chr2 13387301 13387364 -237300490 - L2 LINE L2 -3 3310 3247 1118 204 0 27 chr2 13387369 13387589 -237300265 - MER20 DNA MER1_type -5 214 1 246 351 38 15 chr2 13387801 13387932 -237299922 - MIR SINE MIR -6 256 123 1863 137 7 0 chr2 13387966 13388271 -237299583 + AluSg SINE Alu 1 307 0 22 0 0 0 chr2 13389383 13389405 -237298449 + AT_rich Low_complexity Low_complexity 1 22 0 195 309 16 81 chr2 13389530 13389653 -237298201 - L2 LINE L2 -209 3063 2949 369 320 109 0 chr2 13389793 13389968 -237297886 - MIR SINE MIR -27 235 42 1149 86 0 0 chr2 13390543 13391109 -237296745 + (TA)n Simple_repeat Simple_repeat 1 566 0 231 61 0 0 chr2 13391301 13391334 -237296520 + (TA)n Simple_repeat Simple_repeat 1 33 0 229 44 89 0 chr2 13391462 13391507 -237296347 + (TTATA)n Simple_repeat Simple_repeat 1 49 0 501 52 67 22 chr2 13391643 13391778 -237296076 + (TA)n Simple_repeat Simple_repeat 2 142 0 181 390 7 58 chr2 13391839 13391993 -237295861 + L2 LINE L2 2948 3093 -179 1344 213 49 47 chr2 13392142 13392577 -237295277 + MLT2D LTR ERVL 1 464 0 23 0 0 0 chr2 13392581 13392604 -237295250 + AT_rich Low_complexity Low_complexity 1 23 0 413 257 83 9 chr2 13392848 13392957 -237294897 + MIR SINE MIR 33 149 -59 324 0 0 0 chr2 13394000 13394036 -237293818 + (TTA)n Simple_repeat Simple_repeat 3 38 0 1511 165 37 77 chr2 13394219 13394681 -237293173 - MER67C LTR ERV1 -100 414 1 27 29 0 0 chr2 13394797 13394831 -237293023 + AT_rich Low_complexity Low_complexity 1 34 0 430 314 30 24 chr2 13395290 13395459 -237292395 - MIR SINE MIR -28 234 65 189 0 0 0 chr2 13395819 13395840 -237292014 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 22 56 0 0 chr2 13396096 13396132 -237291722 + AT_rich Low_complexity Low_complexity 1 36 0 213 328 33 66 chr2 13396136 13396258 -237291596 + MIR3 SINE MIR 67 184 -24 342 0 0 0 chr2 13396411 13396449 -237291405 + (TA)n Simple_repeat Simple_repeat 2 39 0 1330 197 66 138 chr2 13396501 13397003 -237290851 + MLT1E2 LTR MaLR 36 501 -125 247 240 37 51 chr2 13397025 13397127 -237290727 - MIR SINE MIR -56 206 106 514 204 9 4 chr2 13397171 13397285 -237290569 + MLT1D LTR MaLR 358 505 0 3688 151 27 3 chr2 13397325 13397955 -237289899 + L1PA13 LINE L1 5513 6157 -6 185 348 0 29 chr2 13398042 13398111 -237289743 + L2 LINE L2 3179 3245 -68 24 0 0 0 chr2 13399197 13399221 -237288633 + AT_rich Low_complexity Low_complexity 1 24 0 1512 162 16 67 chr2 13399560 13399874 -237287980 - AluJo SINE Alu -14 298 1 353 362 74 28 chr2 13399926 13400385 -237287469 - L1MEc LINE L1 -4789 1607 1128 198 236 0 0 chr2 13400394 13400449 -237287405 + (CATA)n Simple_repeat Simple_repeat 2 56 0 24 0 0 0 chr2 13400577 13400601 -237287253 + AT_rich Low_complexity Low_complexity 1 24 0 301 111 254 0 chr2 13401025 13401088 -237286766 + MADE1 DNA Mariner 2 80 0 254 295 92 30 chr2 13401168 13401473 -237286381 + L1ME3A LINE L1 4919 5242 -904 679 233 90 29 chr2 13401512 13401757 -237286097 + L1ME3A LINE L1 5898 6157 -13 217 221 26 13 chr2 13401905 13401982 -237285872 + (TA)n Simple_repeat Simple_repeat 1 78 0 446 79 13 26 chr2 13402244 13402320 -237285534 - L1PA11 LINE L1 -2749 3397 3323 * 11559 138 25 1 chr2 13402310 13405025 -237282829 + L1PA11 LINE L1 3399 6174 0 444 290 19 26 chr2 13405700 13405855 -237281999 + MIR SINE MIR 103 256 -6 23 0 0 0 chr2 13406221 13406244 -237281610 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 13406670 13406700 -237281154 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr2 13406721 13406756 -237281098 + AT_rich Low_complexity Low_complexity 1 35 0 638 254 63 54 chr2 13407110 13407444 -237280410 + L1M4 LINE L1 2637 2973 -3173 204 206 0 0 chr2 13409087 13409121 -237278733 + (TTG)n Simple_repeat Simple_repeat 2 35 0 659 185 7 44 chr2 13409344 13409479 -237278375 - FLAM_C SINE Alu -3 130 1 2055 132 63 17 chr2 13409560 13409908 -237277946 + THE1B LTR MaLR 1 364 0 201 322 51 94 chr2 13409975 13410230 -237277624 + L2 LINE L2 2685 2928 -386 387 222 85 59 chr2 13410647 13410800 -237277054 + L1MEc LINE L1 43 199 -6197 546 113 0 0 chr2 13411013 13411093 -237276761 + MADE1 DNA Mariner 1 80 0 212 280 0 0 chr2 13411673 13411723 -237276131 - L2 LINE L2 -15 3298 3249 651 141 7 40 chr2 13411754 13411903 -237275951 + L1MA9 LINE L1 6169 6312 0 555 286 93 88 chr2 13411923 13412310 -237275544 - LTR41 LTR ERVL -6 767 375 368 282 27 18 chr2 13412310 13412420 -237275434 - MER81 DNA DNA 0 114 4 555 286 93 88 chr2 13412420 13412580 -237275274 - LTR41 LTR ERVL -398 375 217 430 290 47 31 chr2 13413563 13413756 -237274098 - MIR SINE MIR -15 247 52 353 299 51 16 chr2 13414116 13414370 -237273484 + L1ME LINE L1 5562 5824 -297 5674 143 13 7 chr2 13414411 13415599 -237272255 + L1PB1 LINE L1 4956 6149 -2 258 272 39 10 chr2 13415710 13415813 -237272041 - MER5C DNA MER1_type -1 323 218 222 234 287 0 chr2 13415839 13415933 -237271921 - MER5C DNA MER1_type -200 124 4 359 254 146 0 chr2 13416654 13416764 -237271090 + MLT1H1 LTR MaLR 37 162 -393 2589 183 19 10 chr2 13416881 13417362 -237270492 - LTR45B LTR ERV1 0 489 5 222 363 101 50 chr2 13417471 13418270 -237269584 + L2 LINE L2 2206 3053 -219 617 209 105 0 chr2 13418514 13418735 -237269119 + L1M4 LINE L1 5122 5363 -802 271 240 0 0 chr2 13418750 13418800 -237269054 - L1M4b LINE L1 -6797 62 13 205 182 45 0 chr2 13418984 13419028 -237268826 + T-rich Low_complexity Low_complexity 2 47 0 405 276 22 77 chr2 13419732 13419913 -237267941 - MIR SINE MIR -13 249 79 25 0 0 0 chr2 13421205 13421230 -237266624 + AT_rich Low_complexity Low_complexity 1 25 0 809 168 0 0 chr2 13421230 13421373 -237266481 - L1MA4 LINE L1 -9 6291 6149 1364 48 0 5 chr2 13421373 13421586 -237266268 - L1P3 LINE L1 -715 5439 5228 5240 53 12 0 chr2 13421586 13422245 -237265609 + L1PA8 LINE L1 5502 6172 0 8200 178 25 41 chr2 13422253 13424457 -237263397 + L1M1 LINE L1 16 2859 -4706 2302 138 3 3 chr2 13424448 13424817 -237263037 + L1MA3 LINE L1 5484 5852 -453 * 1133 122 5 70 chr2 13424811 13424987 -237262867 - L1M1 LINE L1 -487 5813 5652 * 2140 153 3 27 chr2 13424987 13425360 -237262494 - THE1B LTR MaLR 0 364 1 1133 122 5 70 chr2 13425360 13425396 -237262458 - L1M1 LINE L1 -648 5652 5615 462 327 48 24 chr2 13425515 13425763 -237262091 - MIR SINE MIR -1 261 8 1847 162 3 3 chr2 13426215 13426524 -237261330 + AluSx SINE Alu 1 309 -3 24 53 0 0 chr2 13427250 13427288 -237260566 + AT_rich Low_complexity Low_complexity 1 38 0 2206 81 3 17 chr2 13427820 13428118 -237259736 + AluY SINE Alu 1 294 -17 383 139 28 14 chr2 13428537 13428609 -237259245 - L1MB1 LINE L1 -1 6167 6095 777 133 0 21 chr2 13428609 13428752 -237259102 - L1MB1 LINE L1 -3 6165 6026 202 316 51 0 chr2 13429307 13429405 -237258449 - MIR SINE MIR -47 215 113 295 326 0 11 chr2 13430027 13430119 -237257735 - MLT1I LTR MaLR -305 104 14 956 300 58 40 chr2 13430409 13430963 -237256891 - L1ME LINE L1 -5380 690 127 297 231 42 106 chr2 13431454 13431762 -237256092 - MER110A LTR ERV1 -104 364 39 249 267 171 48 chr2 13434390 13434536 -237253318 + MIR SINE MIR 58 221 -41 1606 210 3 31 chr2 13434925 13435278 -237252576 + MER2 DNA MER2_type 2 344 0 385 244 8 34 chr2 13435750 13435869 -237251985 + MLT1K LTR MaLR 463 578 -10 2142 109 3 0 chr2 13436095 13436388 -237251466 + AluSx SINE Alu 1 294 -18 226 287 197 8 chr2 13436901 13437023 -237250831 - L2 LINE L2 -7 3306 3162 254 335 34 34 chr2 13438782 13439021 -237248833 + L1MEc LINE L1 692 930 -5466 7603 30 0 0 chr2 13439034 13440355 -237247499 + L1PA3 LINE L1 4875 6195 0 272 274 73 50 chr2 13440425 13440742 -237247112 + L1MEc LINE L1 952 1275 -4940 296 131 0 48 chr2 13440799 13440883 -237246971 + (TC)n Simple_repeat Simple_repeat 1 80 0 21 0 0 0 chr2 13442362 13442383 -237245471 + AT_rich Low_complexity Low_complexity 1 21 0 1159 269 180 27 chr2 13443217 13443767 -237244087 - MER76 LTR ERV -54 634 1 208 294 11 167 chr2 13444387 13444567 -237243287 - MIR SINE MIR -43 219 68 21 0 0 0 chr2 13444937 13444958 -237242896 + AT_rich Low_complexity Low_complexity 1 21 0 246 200 50 17 chr2 13445421 13445481 -237242373 + MIR SINE MIR 135 196 -66 3009 79 49 14 chr2 13445534 13445574 -237242280 - MLT2A1 LTR ERVL 0 444 407 252 59 0 0 chr2 13445574 13445608 -237242246 + (TA)n Simple_repeat Simple_repeat 2 35 0 3009 79 49 14 chr2 13445608 13445996 -237241858 - MLT2A1 LTR ERVL -37 407 1 228 352 134 32 chr2 13446567 13446911 -237240943 + L2 LINE L2 2444 2822 -492 2015 131 13 0 chr2 13447637 13447935 -237239919 + AluSx SINE Alu 6 307 -5 296 261 155 70 chr2 13450857 13450999 -237236855 + L2 LINE L2 3158 3311 -2 280 304 130 22 chr2 13451070 13451254 -237236600 + L2 LINE L2 1396 1599 -1715 241 306 82 53 chr2 13452142 13452312 -237235542 - MIR SINE MIR -18 244 70 1425 123 20 20 chr2 13452471 13452724 -237235130 - L1MA5A LINE L1 -2 6295 6043 26 93 0 0 chr2 13453131 13453206 -237234648 + AT_rich Low_complexity Low_complexity 1 75 0 2016 125 0 16 chr2 13453342 13453669 -237234185 + AluSx SINE Alu 1 322 0 264 207 46 23 chr2 13453847 13453934 -237233920 - L1MB7 LINE L1 -9 6175 6087 329 235 82 0 chr2 13454156 13454254 -237233600 - MIR SINE MIR -46 216 111 13763 179 37 24 chr2 13454300 13454443 -237233411 + L1MA3 LINE L1 18 158 -7566 5839 18 0 0 chr2 13454443 13455115 -237232739 + L1PA3 LINE L1 5481 6152 -3 13763 179 37 24 chr2 13455115 13462151 -237225703 + L1MA3 LINE L1 158 7724 0 677 316 179 12 chr2 13462313 13462816 -237225038 + L2 LINE L2 1777 2363 -951 195 162 0 0 chr2 13463008 13463045 -237224809 + CT-rich Low_complexity Low_complexity 2 38 0 238 281 74 66 chr2 13463320 13463441 -237224413 + L2 LINE L2 2362 2483 -831 1759 140 4 7 chr2 13463445 13463717 -237224137 - AluSx SINE Alu -6 306 36 2023 150 0 0 chr2 13463724 13464064 -237223790 - L1MA5 LINE L1 -2 6940 6601 742 182 0 27 chr2 13464064 13464212 -237223642 - L1MA5 LINE L1 -873 5915 5772 * 4377 227 55 30 chr2 13464211 13465632 -237222222 - L1MA5 LINE L1 -2488 4300 2844 2540 231 210 41 chr2 13465649 13467010 -237220844 - L1MA5 LINE L1 -3991 2798 1212 1683 304 55 25 chr2 13467100 13467734 -237220120 - L1MA5 LINE L1 -6132 657 5 251 374 103 33 chr2 13467793 13468478 -237219376 + L2 LINE L2 2554 3287 -26 9941 124 34 6 chr2 13468482 13468940 -237218914 + THE1C-int LTR MaLR 2 446 -1134 2011 133 3 0 chr2 13468940 13469234 -237218620 + AluSg SINE Alu 1 295 -15 9941 124 34 6 chr2 13469234 13470311 -237217543 + THE1C-int LTR MaLR 446 1580 0 1629 138 57 81 chr2 13470311 13470695 -237217159 + THE1C LTR MaLR 1 375 0 1113 205 12 101 chr2 13471092 13471428 -237216426 + MLT1E3 LTR MaLR 319 624 0 24 0 0 0 chr2 13471545 13471569 -237216285 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 13472023 13472044 -237215810 + AT_rich Low_complexity Low_complexity 1 21 0 351 78 0 0 chr2 13472592 13472643 -237215211 + (TG)n Simple_repeat Simple_repeat 1 51 0 273 296 0 0 chr2 13472820 13472901 -237214953 + MLT1A2 LTR MaLR 7 87 -287 * 352 148 0 0 chr2 13472899 13472953 -237214901 + MLT1A2 LTR MaLR 321 374 0 475 303 88 8 chr2 13473450 13473701 -237214153 - HAL1 LINE L1 -5 2502 2232 642 260 68 41 chr2 13473860 13474079 -237213775 - MIR SINE MIR -36 226 2 335 296 132 6 chr2 13474113 13474272 -237213582 - HAL1 LINE L1 -475 2032 1854 332 378 58 18 chr2 13474409 13474634 -237213220 - HAL1 LINE L1 -1594 913 680 587 271 28 11 chr2 13474766 13474943 -237212911 - MLT1A1 LTR MaLR 0 365 186 1548 256 59 18 chr2 13475125 13475750 -237212104 - L1M4 LINE L1 -1214 4932 4282 210 176 0 0 chr2 13475860 13475894 -237211960 + T-rich Low_complexity Low_complexity 1 34 0 376 198 22 44 chr2 13475894 13476076 -237211778 - L1M4 LINE L1 -2884 3262 3085 788 349 30 0 chr2 13476211 13476512 -237211342 - L2 LINE L2 -988 2326 2017 310 356 33 58 chr2 13476540 13476815 -237211039 + MLT1H1 LTR MaLR 31 298 -257 195 100 0 0 chr2 13476818 13476848 -237211006 + (TG)n Simple_repeat Simple_repeat 1 30 0 380 287 25 0 chr2 13476964 13477086 -237210768 - L1MEd LINE L1 -5993 126 2 251 289 70 9 chr2 13477097 13477211 -237210643 + MIR SINE MIR 87 207 -55 236 381 12 0 chr2 13478381 13478465 -237209389 - MIR SINE MIR -140 122 38 219 125 0 0 chr2 13478627 13478667 -237209187 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 35 0 0 chr2 13479374 13479403 -237208451 + AT_rich Low_complexity Low_complexity 1 29 0 431 83 0 0 chr2 13479997 13480057 -237207797 + L1PBa LINE L1 1276 1335 -5528 219 288 64 56 chr2 13480246 13480371 -237207483 + MIR SINE MIR 31 156 -106 332 304 177 41 chr2 13480395 13480813 -237207041 - MLT1H LTR MaLR -2 547 73 215 253 107 0 chr2 13481463 13481538 -237206316 + MIR SINE MIR 47 129 -133 1177 158 113 25 chr2 13481597 13481837 -237206017 + MSTA LTR MaLR 1 261 -167 3023 40 3 3 chr2 13481837 13482208 -237205646 + L1PA3 LINE L1 4104 4474 -1672 7534 31 39 1 chr2 13482308 13483951 -237203903 + L1PA3 LINE L1 4472 6152 -3 971 121 145 0 chr2 13483981 13484147 -237203707 + MSTA LTR MaLR 239 428 0 2490 284 24 25 chr2 13484547 13485372 -237202482 + L1MB7 LINE L1 54 877 -5665 2394 244 29 39 chr2 13485371 13486228 -237201626 + L1MB7 LINE L1 4640 5488 -1156 * 283 215 46 15 chr2 13486228 13486358 -237201496 + (TTAAA)n Simple_repeat Simple_repeat 1 134 0 3516 196 51 6 chr2 13486358 13487266 -237200588 + L1MB7 LINE L1 5724 6674 -8 324 339 9 0 chr2 13487769 13487881 -237199973 + L2 LINE L2 2167 2279 -1035 181 217 0 43 chr2 13488628 13488674 -237199180 + MIR SINE MIR 152 195 -67 28 71 0 0 chr2 13490528 13490584 -237197270 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr2 13491077 13491100 -237196754 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 13491670 13491695 -237196159 + AT_rich Low_complexity Low_complexity 1 25 0 666 111 0 10 chr2 13491710 13491809 -237196045 + MER4A LTR ERV1 1 98 -566 2341 114 2 96 chr2 13491809 13492255 -237195599 + MER4A LTR ERV1 261 664 0 248 325 88 31 chr2 13492426 13492586 -237195268 + MIR SINE MIR 13 181 -81 1771 174 18 0 chr2 13492596 13492929 -237194925 + L1MA4 LINE L1 5936 6274 -26 466 347 6 6 chr2 13493503 13493676 -237194178 - MER5B DNA MER1_type 0 178 6 2603 130 9 25 chr2 13493876 13494314 -237193540 + MER57B LTR ERV1 1 431 -3 4087 155 24 6 chr2 13494317 13494980 -237192874 + MER57B-int LTR ERV1 1 675 -6862 * 4164 174 49 15 chr2 13494974 13496327 -237191527 + MER57B-int LTR ERV1 288 1775 -4171 1114 101 10 8 chr2 13496314 13496487 -237191367 + MER57B-int LTR ERV1 1503 2017 -3929 * 254 91 68 0 chr2 13496463 13496507 -237191347 + MER57B-int LTR ERV1 2167 2213 -3733 * 14317 167 91 61 chr2 13496495 13498217 -237189637 + MER57B-int LTR ERV1 3336 5005 -2532 2189 90 0 13 chr2 13498217 13498518 -237189336 + AluSg SINE Alu 14 310 0 14317 167 91 61 chr2 13498518 13500501 -237187353 + MER57B-int LTR ERV1 5005 7151 -386 706 118 31 31 chr2 13500501 13500628 -237187226 + LTR54B LTR ERV1 5 131 -367 1436 121 121 0 chr2 13500628 13500859 -237186995 + MER57B-int LTR ERV1 7279 7537 0 2756 105 16 23 chr2 13500859 13501296 -237186558 + MER57B LTR ERV1 1 434 0 32 43 0 0 chr2 13501445 13501491 -237186363 + AT_rich Low_complexity Low_complexity 1 46 0 777 212 6 24 chr2 13501495 13501665 -237186189 + AluJo SINE Alu 5 171 -141 379 326 98 19 chr2 13501730 13502180 -237185674 - MLT2E LTR ERVL -74 554 42 433 280 83 38 chr2 13502257 13503210 -237184644 + L1ME3A LINE L1 5072 6090 -80 1933 49 23 102 chr2 13503300 13503630 -237184224 + AluY SINE Alu 1 306 0 244 307 88 18 chr2 13503855 13503969 -237183885 + L2 LINE L2 3015 3136 -177 775 257 5 0 chr2 13503989 13504176 -237183678 + Tigger6a DNA MER2_type 2 189 -894 * 2226 213 46 28 chr2 13504169 13504751 -237183103 + Tigger6a DNA MER2_type 425 1017 -66 985 331 110 49 chr2 13504941 13505721 -237182133 - L2 LINE L2 -431 2883 2031 5004 24 0 3 chr2 13505721 13506309 -237181545 + L1PA3 LINE L1 5570 6155 0 985 331 110 49 chr2 13506309 13506502 -237181352 - L2 LINE L2 -1283 2031 1851 330 224 8 24 chr2 13506510 13506635 -237181219 - L1MEc LINE L1 -4130 2266 2144 1801 203 129 27 chr2 13506636 13507154 -237180700 - L1MC3 LINE L1 -16 7769 7199 1243 254 40 55 chr2 13507142 13507689 -237180165 - L1M4 LINE L1 -1143 5003 4465 * 383 83 97 42 chr2 13507980 13508052 -237179802 + L1PB4 LINE L1 6074 6149 -7 22 0 0 0 chr2 13508270 13508292 -237179562 + AT_rich Low_complexity Low_complexity 1 22 0 193 300 60 40 chr2 13508433 13508533 -237179321 + MIR SINE MIR 10 111 -151 1743 261 63 54 chr2 13508917 13509352 -237178502 - L1ME1 LINE L1 -2 6164 5718 252 0 0 0 chr2 13509352 13509380 -237178474 + (TG)n Simple_repeat Simple_repeat 2 29 0 1743 261 63 54 chr2 13509380 13509706 -237178148 - L1ME1 LINE L1 -448 5718 5396 501 283 94 5 chr2 13509812 13510035 -237177819 - L1ME1 LINE L1 -748 5398 5156 687 206 70 45 chr2 13510040 13510102 -237177752 - L1ME1 LINE L1 -1435 4711 4652 1211 254 56 58 chr2 13510102 13510606 -237177248 - MLT1D LTR MaLR -2 503 1 687 206 70 45 chr2 13510606 13510829 -237177025 - L1ME1 LINE L1 -1494 4652 4419 215 260 0 41 chr2 13511225 13511298 -237176556 + CT-rich Low_complexity Low_complexity 4 73 0 22 99 0 0 chr2 13512918 13512989 -237174865 + AT_rich Low_complexity Low_complexity 1 71 0 21 36 0 0 chr2 13513097 13513125 -237174729 + AT_rich Low_complexity Low_complexity 1 28 0 203 375 23 16 chr2 13514735 13514863 -237172991 - L3 LINE CR1 -105 1472 1344 2378 58 0 55 chr2 13515191 13515516 -237172338 - AluY SINE Alu -4 307 1 21 0 0 0 chr2 13517222 13517243 -237170611 + AT_rich Low_complexity Low_complexity 1 21 0 203 311 9 9 chr2 13517274 13517380 -237170474 + (TA)n Simple_repeat Simple_repeat 2 107 0 234 211 0 0 chr2 13517380 13517432 -237170422 - L1MC4 LINE L1 -1339 6703 6652 193 355 27 0 chr2 13517499 13517609 -237170245 - MIR SINE MIR -110 152 40 4200 187 38 68 chr2 13518222 13518576 -237169278 - L1 LINE L1 -1055 5091 4728 7431 35 0 0 chr2 13518576 13519676 -237168178 - L1PA3 LINE L1 0 6155 5093 4200 187 38 68 chr2 13519676 13519972 -237167882 - L1 LINE L1 -1418 4728 4425 1882 156 7 3 chr2 13519972 13520279 -237167575 - AluSx SINE Alu 0 312 5 4200 187 38 68 chr2 13520279 13520758 -237167096 - L1 LINE L1 -1721 4425 3995 545 144 10 0 chr2 13520886 13520990 -237166864 + (CA)n Simple_repeat Simple_repeat 1 105 0 224 363 118 15 chr2 13521294 13521429 -237166425 + L2 LINE L2 3165 3313 0 29 0 0 0 chr2 13521575 13521604 -237166250 + AT_rich Low_complexity Low_complexity 1 29 0 217 281 31 0 chr2 13522212 13522276 -237165578 + MIR SINE MIR 76 141 -121 396 0 0 0 chr2 13522327 13522371 -237165483 + (CA)n Simple_repeat Simple_repeat 2 45 0 1657 195 10 0 chr2 13522384 13522691 -237165163 + AluJb SINE Alu 1 310 -2 6657 18 0 0 chr2 13523601 13524365 -237163489 - L1PA4 LINE L1 -8 6147 5384 5692 29 0 1 chr2 13524363 13525055 -237162799 + L1PA4 LINE L1 4704 5394 -752 * 240 315 0 22 chr2 13525454 13525546 -237162308 + GA-rich Low_complexity Low_complexity 3 92 0 2183 142 6 6 chr2 13526316 13526676 -237161178 + MER46B DNA MER2_type 2 236 0 226 264 73 36 chr2 13527325 13527435 -237160419 - MER103 DNA DNA -10 156 43 1606 199 3 7 chr2 13527443 13527735 -237160119 - AluJo SINE Alu -18 294 4 22 0 0 0 chr2 13528507 13528529 -237159325 + AT_rich Low_complexity Low_complexity 1 22 0 235 266 81 73 chr2 13529212 13529336 -237158518 - MIR SINE MIR -64 144 20 227 225 0 38 chr2 13529370 13529450 -237158404 + CT-rich Low_complexity Low_complexity 2 78 0 4256 160 16 27 chr2 13529477 13529807 -237158047 + L1PB4 LINE L1 5363 5695 -461 2115 110 3 0 chr2 13529807 13530107 -237157747 + AluSg SINE Alu 1 301 -9 4256 160 16 27 chr2 13530107 13530578 -237157276 + L1PB4 LINE L1 5695 6155 -1 2125 116 0 0 chr2 13530586 13530878 -237156976 + AluSx SINE Alu 1 292 -20 1316 273 113 20 chr2 13530895 13531716 -237156138 - L1MEc LINE L1 -3131 3084 2148 198 0 0 0 chr2 13531716 13531738 -237156116 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1316 273 113 20 chr2 13531738 13532055 -237155799 - L1MEc LINE L1 -4067 2148 1862 362 175 62 0 chr2 13532073 13532153 -237155701 - L1MB4 LINE L1 0 6180 6096 1068 153 0 0 chr2 13532268 13532454 -237155400 - AluSq SINE Alu 0 314 129 26 88 0 0 chr2 13533023 13533091 -237154763 + AT_rich Low_complexity Low_complexity 1 68 0 260 312 0 32 chr2 13533616 13533709 -237154145 + MIR3 SINE MIR 67 156 -52 6394 220 41 20 chr2 13533968 13536925 -237150929 - L1MA4 LINE L1 -6 7713 4658 1766 236 42 33 chr2 13536931 13537752 -237150102 - L1MA4 LINE L1 -3726 3839 3015 842 265 58 22 chr2 13537736 13538147 -237149707 - L1MEc LINE L1 -2786 3429 3004 * 4064 198 20 70 chr2 13538162 13539079 -237148775 + L1MA9 LINE L1 4874 5690 -622 336 24 0 0 chr2 13539079 13539120 -237148734 + (CA)n Simple_repeat Simple_repeat 2 42 0 4064 198 20 70 chr2 13539120 13539714 -237148140 + L1MA9 LINE L1 5690 6312 0 34 0 0 0 chr2 13539718 13539752 -237148102 + AT_rich Low_complexity Low_complexity 1 34 0 789 307 83 30 chr2 13539756 13540458 -237147396 - L1MEc LINE L1 -4591 1805 1041 2274 105 0 0 chr2 13540458 13540763 -237147091 - AluSx SINE Alu -7 305 1 789 307 83 30 chr2 13540763 13540982 -237146872 - L1MEc LINE L1 -5355 1041 835 386 367 52 39 chr2 13541070 13541528 -237146326 - L1MEc LINE L1 -5711 685 222 28 0 0 0 chr2 13541718 13541746 -237146108 + AT_rich Low_complexity Low_complexity 1 28 0 227 299 188 0 chr2 13542303 13542420 -237145434 + MIR SINE MIR 35 173 -89 2368 72 0 0 chr2 13543317 13543623 -237144231 - AluY SINE Alu -5 306 1 198 320 39 68 chr2 13544391 13544494 -237143360 + MIR3 SINE MIR 15 114 -94 2297 44 17 7 chr2 13544529 13544823 -237143031 + AluY SINE Alu 1 297 -14 239 305 145 15 chr2 13545133 13545264 -237142590 - L2 LINE L2 -8 3305 3158 332 319 0 0 chr2 13545273 13545364 -237142490 + L1MC4 LINE L1 6613 6703 -1339 * 359 289 0 0 chr2 13545284 13545374 -237142480 - L1MC4 LINE L1 -1339 6703 6614 696 269 152 63 chr2 13545392 13545546 -237142308 - L2 LINE L2 -134 3179 3040 1819 112 29 4 chr2 13545546 13545822 -237142032 - AluSx SINE Alu -17 295 13 696 269 152 63 chr2 13545822 13546225 -237141629 - L2 LINE L2 -273 3040 2608 422 319 70 14 chr2 13547349 13547562 -237140292 - MLT1G LTR MaLR -12 578 354 359 297 17 80 chr2 13547840 13548015 -237139839 - L2 LINE L2 -4 3309 3146 744 337 239 22 chr2 13548134 13549272 -237138582 - L2 LINE L2 -339 2975 1591 2163 102 6 6 chr2 13549469 13549782 -237138072 + AluSp SINE Alu 1 313 0 438 126 133 106 chr2 13550141 13550292 -237137562 - L1MA4 LINE L1 0 6300 6146 24 0 0 70 chr2 13550919 13550962 -237136892 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr2 13550991 13551019 -237136835 + AT_rich Low_complexity Low_complexity 1 28 0 229 307 0 0 chr2 13551032 13551120 -237136734 - L1M4 LINE L1 -1439 4707 4620 654 285 35 59 chr2 13551704 13551960 -237135894 + MIR SINE MIR 13 262 0 24 0 0 0 chr2 13553870 13553894 -237133960 + AT_rich Low_complexity Low_complexity 1 24 0 795 225 221 28 chr2 13553912 13554072 -237133782 + L1MC5 LINE L1 6693 6821 -1140 1968 110 7 21 chr2 13554072 13554363 -237133491 + AluSq SINE Alu 1 287 -26 795 225 221 28 chr2 13554363 13554660 -237133194 + L1MC5 LINE L1 6821 7238 -723 255 114 0 0 chr2 13557627 13557671 -237130183 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 405 181 0 0 chr2 13557930 13558013 -237129841 - AluJ/FRAM SINE Alu -9 303 221 1884 156 33 33 chr2 13559283 13559617 -237128237 - MER1B DNA MER1_type -5 334 1 399 284 24 8 chr2 13559867 13559994 -237127860 - HsTC2 DNA Tc2 0 1900 1772 453 284 27 7 chr2 13560159 13560307 -237127547 - HsTC2 DNA Tc2 -217 1681 1531 474 315 0 0 chr2 13560511 13560638 -237127216 - HsTC2 DNA Tc2 -1750 148 22 21 0 0 0 chr2 13560993 13561014 -237126840 + AT_rich Low_complexity Low_complexity 1 21 0 607 194 45 8 chr2 13561233 13561367 -237126487 - MIR SINE MIR 0 262 124 232 375 14 28 chr2 13561459 13561603 -237126251 + MIR SINE MIR 3 144 -118 3586 280 103 14 chr2 13561609 13562032 -237125822 + L1PB1 LINE L1 5 389 -5752 216 0 0 0 chr2 13562032 13562056 -237125798 + (GA)n Simple_repeat Simple_repeat 2 25 0 3586 280 103 14 chr2 13562056 13562887 -237124967 + L1PB1 LINE L1 389 1371 -4770 406 280 59 72 chr2 13562889 13563048 -237124806 + FAM SINE Alu 1 149 -26 353 254 0 9 chr2 13563062 13563172 -237124682 + L1PB1 LINE L1 1391 1499 -4642 2374 138 14 0 chr2 13563174 13563530 -237124324 - THE1B LTR MaLR 0 364 4 9319 120 66 12 chr2 13563533 13565032 -237122822 - THE1B-int LTR MaLR 0 1580 1 2316 127 25 6 chr2 13565034 13565389 -237122465 - THE1B LTR MaLR -2 362 1 499 230 62 82 chr2 13565411 13565592 -237122262 + L1PB1 LINE L1 1504 1670 -4519 * 5072 219 11 12 chr2 13565588 13566809 -237121045 - L1PB1 LINE L1 -1871 4339 3121 * 5299 171 22 32 chr2 13566805 13567060 -237120794 + L1PB1 LINE L1 4359 4615 -1600 1868 148 67 17 chr2 13567060 13567417 -237120437 + THE1C LTR MaLR 1 375 0 5299 171 22 32 chr2 13567417 13569039 -237118815 + L1PB1 LINE L1 4615 6215 0 1552 262 81 46 chr2 13569105 13569328 -237118526 + L1MA9 LINE L1 2690 2904 -4661 999 196 5 0 chr2 13569328 13569542 -237118312 + L1MA4 LINE L1 6077 6291 -9 1552 262 81 46 chr2 13569542 13570442 -237117412 + L1MA9 LINE L1 2904 3848 -3717 4629 62 13 0 chr2 13570449 13571047 -237116807 + L1PA7 LINE L1 5548 6153 -1 9696 210 38 57 chr2 13571437 13572825 -237115029 + L1MA9 LINE L1 3842 5256 -2475 273 235 0 0 chr2 13572825 13572876 -237114978 + MLT1A1 LTR MaLR 52 102 -263 9696 210 38 57 chr2 13572876 13574758 -237113096 + L1MA9 LINE L1 5256 7090 -641 2196 204 51 8 chr2 13574774 13575096 -237112758 + L1MA9 LINE L1 7195 7549 -182 240 35 0 0 chr2 13575096 13575125 -237112729 + (TA)n Simple_repeat Simple_repeat 1 29 0 2196 204 51 8 chr2 13575125 13575316 -237112538 + L1MA9 LINE L1 7549 7730 -1 282 257 54 49 chr2 13575484 13575616 -237112238 + MIR SINE MIR 19 151 -77 227 267 22 22 chr2 13577432 13577522 -237110332 - L1MC4 LINE L1 -1339 6703 6614 291 314 31 38 chr2 13577757 13577916 -237109938 + MIR SINE MIR 104 261 -1 21 0 0 0 chr2 13577921 13577942 -237109912 + AT_rich Low_complexity Low_complexity 1 21 0 514 212 76 15 chr2 13578337 13578473 -237109381 + L1ME1 LINE L1 5783 5906 -260 1524 228 0 3 chr2 13578486 13578793 -237109061 + MLT1A1 LTR MaLR 60 365 0 805 236 25 21 chr2 13578794 13579031 -237108823 + L1ME1 LINE L1 5913 6150 -16 335 235 12 148 chr2 13579447 13579609 -237108245 - MIR SINE MIR -103 159 20 724 301 125 21 chr2 13580135 13580471 -237107383 + MER45C DNA AcHobo 4 374 -579 375 237 13 0 chr2 13580614 13580690 -237107164 + MER45C DNA AcHobo 877 953 0 22 0 0 0 chr2 13581199 13581221 -237106633 + AT_rich Low_complexity Low_complexity 1 22 0 382 162 0 0 chr2 13581224 13581298 -237106556 - L1MA5 LINE L1 0 6300 6227 319 137 0 0 chr2 13581312 13581363 -237106491 + L1MA5 LINE L1 6035 6085 -215 722 290 35 5 chr2 13581413 13581613 -237106241 - MIR SINE MIR -37 225 20 4859 162 23 59 chr2 13581693 13582803 -237105051 - MER11C LTR ERVK 0 1071 1 1088 142 64 37 chr2 13582803 13583021 -237104833 + LTR51 LTR ERV1 8 231 -440 475 275 99 28 chr2 13583086 13583297 -237104557 - MIR SINE MIR -13 249 24 431 287 82 0 chr2 13583408 13583530 -237104324 - MER63 DNA MER1_type -78 758 1 630 101 0 0 chr2 13583726 13583835 -237104019 + (G)n Simple_repeat Simple_repeat 1 109 0 223 269 10 29 chr2 13583835 13583939 -237103915 + G-rich Low_complexity Low_complexity 1 102 0 1944 213 161 41 chr2 13584201 13584882 -237102972 - LTR1B LTR ERV1 -75 751 1 21 57 0 0 chr2 13585175 13585210 -237102644 + AT_rich Low_complexity Low_complexity 1 35 0 3021 68 3 3 chr2 13585270 13585652 -237102202 - MLT2A1 LTR ERVL -62 382 1 633 247 80 65 chr2 13585756 13586080 -237101774 + L1ME1 LINE L1 3794 4122 -2024 5783 32 0 1 chr2 13586080 13586766 -237101088 + L1PA3 LINE L1 5468 6152 -3 359 242 189 14 chr2 13586829 13587110 -237100744 + L1ME1 LINE L1 4114 4443 -1703 * 443 190 74 25 chr2 13587094 13587215 -237100639 + L1MA9 LINE L1 6161 6287 -25 * 516 261 40 76 chr2 13587213 13587438 -237100416 + L1ME1 LINE L1 4422 4633 -1513 1799 108 3 35 chr2 13587438 13587752 -237100102 + AluSx SINE Alu 4 307 -5 516 261 40 76 chr2 13587752 13587855 -237099999 + L1ME1 LINE L1 4633 4738 -1408 1305 284 38 30 chr2 13587881 13588701 -237099153 + L1ME1 LINE L1 5004 5843 -323 413 314 223 18 chr2 13588930 13589548 -237098306 - L2 LINE L2 -767 2547 1803 245 314 70 29 chr2 13590537 13590709 -237097145 - MIR SINE MIR -47 215 37 201 293 0 0 chr2 13591013 13591071 -237096783 + (TGAA)n Simple_repeat Simple_repeat 4 61 0 1523 139 0 0 chr2 13592171 13592401 -237095453 - AluSq SINE Alu -83 230 1 184 372 89 26 chr2 13592430 13592621 -237095233 + L2 LINE L2 2470 2672 -642 215 318 187 0 chr2 13593010 13593117 -237094737 + L2 LINE L2 2915 3041 -272 363 240 67 95 chr2 13593119 13593298 -237094556 - MLT1E2 LTR MaLR -238 267 91 311 189 32 63 chr2 13593309 13593404 -237094450 - L1MC4 LINE L1 -1339 6703 6612 296 18 0 70 chr2 13593404 13593461 -237094393 + (TA)n Simple_repeat Simple_repeat 2 54 0 350 194 0 122 chr2 13593479 13593577 -237094277 - MLT1E2 LTR MaLR -540 86 1 697 209 0 0 chr2 13593626 13593741 -237094113 - FLAM_A SINE Alu -18 115 1 191 146 24 0 chr2 13593769 13593810 -237094044 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 1071 233 124 18 chr2 13594396 13594791 -237093063 + L1ME LINE L1 323 759 -5311 611 221 0 27 chr2 13594862 13595011 -237092843 - L1 LINE L1 -1455 4691 4547 1516 246 72 17 chr2 13597351 13597770 -237090084 - MLT1F LTR MaLR -30 512 71 549 94 250 0 chr2 13597790 13597886 -237089968 - THE1B-int LTR MaLR -1460 120 1 2045 120 50 36 chr2 13597894 13598251 -237089603 - THE1B LTR MaLR 0 364 3 261 319 0 0 chr2 13598253 13598325 -237089529 - MLT1F LTR MaLR -467 75 4 5320 72 7 1 chr2 13598531 13599240 -237088614 + L1PA7 LINE L1 5424 6136 -18 180 351 61 8 chr2 13600663 13600794 -237087060 - MIR3 SINE MIR -34 174 37 4045 203 30 18 chr2 13601460 13602757 -237085097 - L1MB8 LINE L1 -6 6172 4858 36 62 0 0 chr2 13602917 13602981 -237084873 + AT_rich Low_complexity Low_complexity 1 64 0 501 188 30 0 chr2 13603489 13603590 -237084264 + MLT1J LTR MaLR 72 175 -336 213 39 0 0 chr2 13603699 13603725 -237084129 + (GA)n Simple_repeat Simple_repeat 1 26 0 485 222 40 16 chr2 13603725 13603851 -237084003 + L1MC4 LINE L1 7913 8041 -1 1764 288 83 19 chr2 13603955 13604151 -237083703 - L1MC4a LINE L1 -7 7801 7619 2077 109 0 50 chr2 13604151 13604472 -237083382 - AluSx SINE Alu -5 307 3 1764 288 83 19 chr2 13604472 13605078 -237082776 - L1MC4a LINE L1 -189 7619 6947 29 28 0 0 chr2 13606307 13606343 -237081511 + AT_rich Low_complexity Low_complexity 1 36 0 210 196 20 0 chr2 13606666 13606717 -237081137 + T-rich Low_complexity Low_complexity 3 54 0 1816 136 47 17 chr2 13606930 13607231 -237080623 + AluSx SINE Alu 3 312 0 22 0 0 0 chr2 13607349 13607371 -237080483 + AT_rich Low_complexity Low_complexity 1 22 0 257 346 165 16 chr2 13608496 13608739 -237079115 + L2 LINE L2 1168 1446 -1868 428 246 331 0 chr2 13608808 13608950 -237078904 - MER5A DNA MER1_type 0 189 1 452 346 61 65 chr2 13609134 13609951 -237077903 + L2 LINE L2 1758 2571 -743 751 316 101 72 chr2 13610066 13610777 -237077077 - L1MEd LINE L1 -4890 1229 493 2211 105 0 3 chr2 13610777 13611081 -237076773 + AluSg SINE Alu 1 303 -7 751 316 101 72 chr2 13611081 13611132 -237076722 - L1MEd LINE L1 -5626 493 445 260 357 0 0 chr2 13611200 13611284 -237076570 + L2 LINE L2 3227 3310 -3 454 66 13 13 chr2 13611860 13611936 -237075918 + (TA)n Simple_repeat Simple_repeat 1 76 0 800 263 216 11 chr2 13612303 13612664 -237075190 - LTR33A LTR ERVL 0 523 89 256 91 0 36 chr2 13613255 13613310 -237074544 + (TA)n Simple_repeat Simple_repeat 1 53 0 2079 162 25 133 chr2 13613436 13614065 -237073789 - L1MC3 LINE L1 0 7785 7225 515 238 0 0 chr2 13614068 13614190 -237073664 - L1MC3 LINE L1 -693 7092 6971 34 0 0 0 chr2 13614191 13614225 -237073629 + AT_rich Low_complexity Low_complexity 1 34 0 264 266 81 16 chr2 13614236 13614360 -237073494 - L1ME LINE L1 -435 5686 5555 212 291 158 9 chr2 13615478 13615588 -237072266 + MIR SINE MIR 30 154 -54 203 254 32 16 chr2 13617191 13617254 -237070600 + MIR SINE MIR 91 154 -108 186 87 65 0 chr2 13617624 13617670 -237070184 + (TA)n Simple_repeat Simple_repeat 1 49 0 22 0 0 0 chr2 13619099 13619121 -237068733 + AT_rich Low_complexity Low_complexity 1 22 0 1622 123 54 19 chr2 13619259 13619520 -237068334 - AluSx SINE Alu -18 294 25 1305 284 38 30 chr2 13619679 13620499 -237067355 - L1ME1 LINE L1 -323 5777 4938 518 252 46 82 chr2 13620525 13620628 -237067226 - L1ME1 LINE L1 -1408 4672 4567 2110 115 0 3 chr2 13620628 13620933 -237066921 - AluSx SINE Alu -5 307 4 518 252 46 82 chr2 13620933 13621158 -237066696 - L1ME1 LINE L1 -1513 4567 4356 443 190 74 25 chr2 13621156 13621277 -237066577 - L1MA9 LINE L1 -25 6287 6161 * 359 242 189 14 chr2 13621261 13621542 -237066312 - L1ME1 LINE L1 -1703 4377 4048 * 5813 32 0 0 chr2 13621605 13622290 -237065564 - L1PA3 LINE L1 -3 6152 5468 645 246 80 65 chr2 13622289 13622614 -237065240 - L1ME1 LINE L1 -2023 4057 3728 3021 68 3 3 chr2 13622718 13623100 -237064754 + MLT2A1 LTR ERVL 1 382 -62 1221 305 60 56 chr2 13623100 13624782 -237063072 - L1ME1 LINE L1 -4485 1776 57 900 256 98 14 chr2 13624832 13625179 -237062675 - L1M4 LINE L1 -1745 4401 4026 438 254 113 11 chr2 13625163 13625340 -237062514 - L1MEc LINE L1 -3696 2519 2325 * 1443 285 42 63 chr2 13625390 13626523 -237061331 - L1MEc LINE L1 -4842 1554 445 7383 164 18 11 chr2 13626547 13627179 -237060675 + HSMAR2 DNA Mariner 2 628 -674 1223 113 24 38 chr2 13627179 13627392 -237060462 - L1PA15 LINE L1 -3 6162 5953 7383 164 18 11 chr2 13627392 13628050 -237059804 + HSMAR2 DNA Mariner 628 1301 -1 869 176 11 27 chr2 13628094 13628282 -237059572 - L1MA7 LINE L1 -178 6113 5929 692 124 55 7 chr2 13628282 13628419 -237059435 + L1MA7 LINE L1 6132 6283 -8 1854 151 7 7 chr2 13629363 13629684 -237058170 + AluSx SINE Alu 2 312 0 207 167 0 0 chr2 13629915 13629951 -237057903 - MER5B DNA MER1_type -8 170 135 514 304 27 41 chr2 13630209 13630429 -237057425 + MIR SINE MIR 2 218 -44 2208 212 47 8 chr2 13630984 13631512 -237056342 + L1MB8 LINE L1 5624 6172 -6 347 298 48 0 chr2 13631744 13631868 -237055986 - MLT1G1 LTR MaLR 0 595 466 289 310 0 11 chr2 13632568 13632655 -237055199 + L2 LINE L2 3228 3313 0 321 15 75 15 chr2 13632752 13632819 -237055035 + (TA)n Simple_repeat Simple_repeat 2 72 0 803 244 157 37 chr2 13632870 13633247 -237054607 - MSTB LTR MaLR -4 422 1 183 156 0 0 chr2 13633937 13633969 -237053885 + (TATATG)n Simple_repeat Simple_repeat 6 37 0 4537 119 9 4 chr2 13634012 13634703 -237053151 + L1PA10 LINE L1 4730 6162 -1 4537 110 11 0 chr2 13634703 13635360 -237052494 + L1PA10 LINE L1 5504 6167 -1 593 264 53 94 chr2 13635362 13635817 -237052037 + L1MEc LINE L1 1533 1968 -4428 444 303 57 84 chr2 13635882 13636358 -237051496 + L1MEc LINE L1 1749 2211 -4185 267 217 0 0 chr2 13636367 13636427 -237051427 + (CATA)n Simple_repeat Simple_repeat 2 61 0 1786 250 36 7 chr2 13636548 13637107 -237050747 + L1MB8 LINE L1 4477 5051 -1095 301 192 6 84 chr2 13637128 13637295 -237050559 + (TA)n Simple_repeat Simple_repeat 1 154 0 3191 216 44 22 chr2 13637345 13637937 -237049917 + L1MB8 LINE L1 5126 5753 -425 1559 183 3 7 chr2 13637937 13638270 -237049584 + AluJb SINE Alu 1 332 0 3191 216 44 22 chr2 13638270 13638671 -237049183 + L1MB8 LINE L1 5753 6144 -34 377 222 68 17 chr2 13638684 13638801 -237049053 + L1M4 LINE L1 5616 5738 -440 261 86 0 0 chr2 13638802 13638837 -237049017 + AluSp SINE Alu 136 170 -133 574 263 75 22 chr2 13638852 13639116 -237048738 - L1M4 LINE L1 -432 5742 5468 232 414 39 0 chr2 13639216 13639320 -237048534 - L2 LINE L2 -4 3268 3161 1123 219 19 4 chr2 13641157 13641422 -237046432 - L1MB8 LINE L1 -191 5987 5719 22 0 0 0 chr2 13641583 13641605 -237046249 + AT_rich Low_complexity Low_complexity 1 22 0 313 24 24 0 chr2 13642179 13642220 -237045634 + MADE1 DNA Mariner 2 43 -37 496 302 64 42 chr2 13642250 13642515 -237045339 + MLT1K LTR MaLR 306 576 -12 28 48 0 0 chr2 13643057 13643099 -237044755 + AT_rich Low_complexity Low_complexity 1 42 0 235 267 0 27 chr2 13643181 13643256 -237044598 + (TATG)n Simple_repeat Simple_repeat 4 76 0 465 231 41 0 chr2 13643288 13643409 -237044445 + L1ME1 LINE L1 6016 6141 -25 181 281 188 10 chr2 13643902 13643998 -237043856 + MIR SINE MIR 133 245 -17 * 269 286 0 44 chr2 13643996 13644087 -237043767 - MIR SINE MIR -115 147 61 1954 132 0 0 chr2 13644477 13644795 -237043059 + AluSg SINE Alu 3 320 0 181 196 36 0 chr2 13644873 13644929 -237042925 + CT-rich Low_complexity Low_complexity 4 61 0 214 215 31 54 chr2 13645395 13645525 -237042329 + (TAAA)n Simple_repeat Simple_repeat 2 128 0 25 65 0 0 chr2 13645567 13645613 -237042241 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr2 13646510 13646545 -237041309 + AT_rich Low_complexity Low_complexity 1 35 0 30 0 0 0 chr2 13646620 13646650 -237041204 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 13646669 13646691 -237041163 + AT_rich Low_complexity Low_complexity 1 22 0 1435 179 195 8 chr2 13647226 13647605 -237040249 + LTR47A LTR ERVL 1 450 -2 991 140 7 0 chr2 13647943 13648086 -237039768 + AluSq SINE Alu 145 288 -25 584 273 82 62 chr2 13648652 13648908 -237038946 - MIR SINE MIR 0 262 2 2467 66 0 0 chr2 13649047 13649352 -237038502 - AluY SINE Alu -6 305 1 474 270 112 18 chr2 13649554 13649750 -237038104 + MLT1H1 LTR MaLR 32 213 -329 318 289 44 14 chr2 13650061 13650330 -237037524 - L1MCa LINE L1 -4938 1669 1194 426 264 26 80 chr2 13650716 13651027 -237036827 - HAL1b LINE L1 -45 1303 1010 22 35 0 0 chr2 13651048 13651077 -237036777 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 13651230 13651251 -237036603 + AT_rich Low_complexity Low_complexity 1 21 0 1822 110 0 0 chr2 13651308 13651563 -237036291 - AluSx SINE Alu 0 312 58 225 0 0 0 chr2 13651597 13651622 -237036232 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 181 244 0 0 chr2 13652089 13652130 -237035724 - L2 LINE L2 -9 3304 3264 275 140 34 39 chr2 13653984 13654163 -237033691 + (TA)n Simple_repeat Simple_repeat 2 179 0 243 184 29 39 chr2 13654176 13654279 -237033575 + (TA)n Simple_repeat Simple_repeat 2 103 0 478 212 29 29 chr2 13654546 13654683 -237033171 + L1M4b LINE L1 1353 1489 -5370 409 243 129 124 chr2 13654726 13655113 -237032741 - MLT2B1 LTR ERVL 0 520 132 228 207 43 129 chr2 13655242 13655382 -237032472 + L2 LINE L2 3088 3215 -98 1325 170 0 5 chr2 13655413 13655637 -237032217 - AluJo SINE Alu -5 307 85 266 369 0 0 chr2 13655641 13655725 -237032129 + L2 LINE L2 3189 3272 0 285 75 0 0 chr2 13656214 13656254 -237031600 + (TG)n Simple_repeat Simple_repeat 1 40 0 254 372 32 0 chr2 13657663 13657757 -237030097 - MIR SINE MIR -145 117 21 234 333 155 0 chr2 13658408 13658537 -237029317 + MIR3 SINE MIR 43 191 -17 728 272 5 0 chr2 13658586 13658788 -237029066 + MER3 DNA MER1_type 2 204 -5 229 316 158 11 chr2 13658899 13658994 -237028860 + MIR3 SINE MIR 9 117 -91 569 306 70 8 chr2 13659033 13659275 -237028579 + L1M4 LINE L1 9 265 -6277 15011 144 16 101 chr2 13659481 13662882 -237024972 + L1PA7 LINE L1 12 3122 -3024 11894 90 5 0 chr2 13662882 13662947 -237024907 + L1PA7 LINE L1 3606 3669 -2485 354 23 0 0 chr2 13662947 13662990 -237024864 + (CA)n Simple_repeat Simple_repeat 2 44 0 11894 90 5 0 chr2 13662990 13665407 -237022447 + L1PA7 LINE L1 3669 6151 -3 24 0 0 0 chr2 13665407 13665431 -237022423 + AT_rich Low_complexity Low_complexity 1 24 0 1169 274 3 8 chr2 13665533 13665906 -237021948 + L1M4 LINE L1 2635 3005 -3639 * 1778 203 104 10 chr2 13665902 13666410 -237021444 + L1M4 LINE L1 829 1384 -5158 1178 137 16 143 chr2 13666422 13666737 -237021117 + L1MA9 LINE L1 6038 6312 0 1773 246 40 71 chr2 13666781 13667357 -237020497 + L1M4 LINE L1 2539 3131 -3513 183 80 0 0 chr2 13667357 13667382 -237020472 + (TG)n Simple_repeat Simple_repeat 2 26 0 1773 246 40 71 chr2 13667382 13667847 -237020007 + L1M4 LINE L1 3131 3545 -3099 2174 106 0 10 chr2 13667847 13668150 -237019704 - AluSc SINE Alu -5 304 5 1773 246 40 71 chr2 13668150 13668192 -237019662 + L1M4 LINE L1 3545 3587 -3057 474 387 11 7 chr2 13668192 13668453 -237019401 - L2 LINE L2 -301 3012 2753 2076 207 20 4 chr2 13668945 13669438 -237018416 - L1 LINE L1 -2205 3941 3441 * 2438 220 7 19 chr2 13669428 13669968 -237017886 + L1MA9 LINE L1 5630 6163 -149 854 239 37 0 chr2 13669976 13670164 -237017690 + AluJo SINE Alu 95 289 -23 622 205 35 19 chr2 13670168 13670483 -237017371 + GA-rich Low_complexity Low_complexity 1 320 0 312 250 0 0 chr2 13670502 13670578 -237017276 + L1MA10 LINE L1 6183 6258 -76 485 291 7 27 chr2 13671138 13671286 -237016568 + MIR SINE MIR 7 151 -111 25 51 0 0 chr2 13671311 13671350 -237016504 + AT_rich Low_complexity Low_complexity 1 39 0 2157 81 0 3 chr2 13671651 13671971 -237015883 - AluY SINE Alu 0 319 1 23 0 0 0 chr2 13672703 13672726 -237015128 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 13673069 13673093 -237014761 + AT_rich Low_complexity Low_complexity 1 24 0 236 317 18 72 chr2 13674105 13674272 -237013582 + MIR SINE MIR 82 239 -23 2243 93 0 22 chr2 13674288 13674601 -237013253 - AluSc SINE Alu -3 306 1 237 211 141 0 chr2 13674942 13675013 -237012841 + L1P1 LINE L1 5617 5697 -458 310 293 47 13 chr2 13675128 13675356 -237012498 + L1MC4a LINE L1 5712 5950 -171 22 0 0 0 chr2 13676137 13676159 -237011695 + AT_rich Low_complexity Low_complexity 1 22 0 221 301 14 0 chr2 13676295 13676368 -237011486 + MIR SINE MIR 189 262 0 6047 78 1 2 chr2 13676868 13677661 -237010193 + L1P LINE L1 3 794 -5352 43267 41 4 3 chr2 13677822 13683963 -237003891 + L1PA4 LINE L1 8 6152 -3 24 53 0 0 chr2 13684908 13684946 -237002908 + AT_rich Low_complexity Low_complexity 1 38 0 205 293 20 61 chr2 13685307 13685406 -237002448 - MIR3 SINE MIR -21 187 93 487 229 62 22 chr2 13685557 13685736 -237002118 - L1MD3 LINE L1 -1 7994 7809 1065 211 21 0 chr2 13685738 13685980 -237001874 + L1MB5 LINE L1 5928 6174 0 262 355 70 40 chr2 13686002 13686374 -237001480 - L2 LINE L2 -688 2626 2244 1831 167 128 13 chr2 13686666 13687050 -237000804 + MSTA LTR MaLR 1 428 0 233 261 63 54 chr2 13687521 13687632 -237000222 + L1ME LINE L1 4532 4643 -1503 373 296 101 77 chr2 13687849 13688142 -236999712 + L1ME LINE L1 4782 5094 -1052 2224 105 0 16 chr2 13688142 13688457 -236999397 - AluSq SINE Alu -3 310 1 373 296 101 77 chr2 13688457 13688669 -236999185 + L1ME LINE L1 5094 5299 -847 262 289 63 19 chr2 13688729 13688888 -236998966 + L1ME LINE L1 5621 5786 -335 24 53 0 0 chr2 13688905 13688943 -236998911 + AT_rich Low_complexity Low_complexity 1 38 0 266 356 0 0 chr2 13689062 13689208 -236998646 + (TA)n Simple_repeat Simple_repeat 1 146 0 368 296 106 53 chr2 13689624 13689831 -236998023 + L1M4 LINE L1 3635 3860 -2286 2351 83 0 0 chr2 13689831 13690133 -236997721 + AluY SINE Alu 1 302 -9 368 296 106 53 chr2 13690133 13690189 -236997665 + L1M4 LINE L1 3860 3912 -2234 343 311 22 11 chr2 13690770 13690950 -236996904 + L1MEd LINE L1 903 1084 -5035 26 0 0 0 chr2 13691241 13691267 -236996587 + AT_rich Low_complexity Low_complexity 1 26 0 272 315 28 6 chr2 13692574 13692755 -236995099 + L1M4 LINE L1 3759 3943 -2203 393 333 51 46 chr2 13693720 13693957 -236993897 + L3 LINE CR1 609 846 -731 2625 33 0 0 chr2 13694429 13694732 -236993122 - AluY SINE Alu -8 303 1 1162 37 0 0 chr2 13694733 13694867 -236992987 - AluY SINE Alu -177 134 1 22 0 0 0 chr2 13695945 13695967 -236991887 + AT_rich Low_complexity Low_complexity 1 22 0 294 357 29 19 chr2 13695980 13696190 -236991664 + MIR SINE MIR 35 246 -16 22 0 0 0 chr2 13696413 13696435 -236991419 + AT_rich Low_complexity Low_complexity 1 22 0 349 165 23 65 chr2 13696874 13697003 -236990851 - MER2 DNA MER2_type -136 209 22 1077 277 39 10 chr2 13697133 13697440 -236990414 + LTR53 LTR ERVL 194 509 -10 196 268 85 49 chr2 13698350 13698432 -236989422 - L2 LINE L2 -2 3311 3227 243 0 0 0 chr2 13699783 13699810 -236988044 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 2169 130 0 0 chr2 13700364 13700671 -236987183 - AluSc SINE Alu -2 307 1 452 283 22 60 chr2 13701356 13701540 -236986314 + MER8 DNA MER2_type 1 177 -62 383 162 14 27 chr2 13701573 13701647 -236986207 - Tigger2 DNA MER2_type -2645 73 1 319 136 2 2 chr2 13701685 13701736 -236986118 + Alu SINE Alu 2 46 -256 1484 205 10 13 chr2 13701946 13702248 -236985606 - AluJb SINE Alu -11 301 1 186 366 14 0 chr2 13702521 13702592 -236985262 + MIR SINE MIR 64 135 -127 206 301 221 28 chr2 13703300 13703513 -236984341 - MIR SINE MIR -6 256 3 261 305 53 33 chr2 13703576 13703727 -236984127 + MIR SINE MIR 109 262 0 200 300 90 10 chr2 13705101 13705201 -236982653 + MIR SINE MIR 91 198 -64 26 30 0 0 chr2 13705201 13705234 -236982620 + AT_rich Low_complexity Low_complexity 1 33 0 414 131 51 51 chr2 13705349 13705669 -236982185 + (TTAAA)n Simple_repeat Simple_repeat 1 320 0 347 187 66 18 chr2 13705600 13705766 -236982088 + (TTTAA)n Simple_repeat Simple_repeat 1 174 0 * 1491 218 26 12 chr2 13705832 13706171 -236981683 + MLT1A1 LTR MaLR 6 349 -16 1549 141 146 68 chr2 13706171 13706568 -236981286 - MSTA LTR MaLR 0 428 1 2033 167 55 40 chr2 13706661 13707081 -236980773 - MSTB LTR MaLR 0 426 1 180 278 37 74 chr2 13708671 13708779 -236979075 + L2 LINE L2 3160 3263 -9 186 318 0 0 chr2 13709773 13709836 -236978018 + MIR SINE MIR 62 124 -84 228 317 85 55 chr2 13710294 13710458 -236977396 + MIR SINE MIR 87 255 -7 30 0 0 0 chr2 13710593 13710623 -236977231 + AT_rich Low_complexity Low_complexity 1 30 0 767 195 0 16 chr2 13710859 13711044 -236976810 + L1MA7 LINE L1 6109 6290 -1 1338 205 114 40 chr2 13711577 13711928 -236975926 + MLT1B LTR MaLR 4 380 -10 2292 114 42 28 chr2 13711994 13712353 -236975501 - THE1B LTR MaLR 0 364 1 650 219 11 3 chr2 13713090 13713433 -236974421 + GA-rich Low_complexity Low_complexity 1 346 0 305 232 28 46 chr2 13713551 13713659 -236974195 - MLT1H1 LTR MaLR -2 540 448 266 277 10 29 chr2 13713841 13713944 -236973910 - MLT1I LTR MaLR -260 175 70 2066 181 7 20 chr2 13714322 13714726 -236973128 + Tigger1 DNA MER2_type 1 399 -2019 21 0 0 0 chr2 13715831 13715852 -236972002 + AT_rich Low_complexity Low_complexity 1 21 0 210 279 68 104 chr2 13716353 13716392 -236971462 - MIR SINE MIR -51 157 118 6435 25 1 0 chr2 13716392 13717144 -236970710 + L1PA3 LINE L1 5401 6153 -2 210 279 68 104 chr2 13717144 13717283 -236970571 - MIR SINE MIR -90 118 16 256 224 24 71 chr2 13717554 13717614 -236970240 - MIR SINE MIR -3 259 203 1274 232 54 77 chr2 13717614 13718131 -236969723 + MLT1D LTR MaLR 1 505 0 256 224 24 71 chr2 13718131 13718155 -236969699 - MIR SINE MIR -59 203 179 222 274 0 16 chr2 13718155 13718217 -236969637 - MIR SINE MIR -198 64 4 250 328 50 8 chr2 13718907 13719026 -236968828 + L1ME4a LINE L1 5483 5606 -515 303 264 129 31 chr2 13719612 13719775 -236968079 + L1ME4a LINE L1 5927 6105 -16 2271 131 37 0 chr2 13721348 13721699 -236966155 + THE1B LTR MaLR 1 364 0 192 333 36 36 chr2 13721735 13721873 -236965981 + MIR SINE MIR 20 157 -105 2420 153 11 52 chr2 13722079 13722537 -236965317 - Tigger2 DNA MER2_type 0 2718 2280 387 203 0 0 chr2 13722535 13722604 -236965250 - Tigger2 DNA MER2_type -2649 69 1 * 450 251 82 55 chr2 13722651 13722906 -236964948 - L1MC4 LINE L1 -32 8010 7749 24 32 0 0 chr2 13722965 13722996 -236964858 + AT_rich Low_complexity Low_complexity 1 31 0 325 308 97 26 chr2 13723006 13723233 -236964621 - L1MC4 LINE L1 -462 7580 7338 768 97 0 18 chr2 13723235 13723349 -236964505 + FRAM SINE Alu 60 171 -5 338 278 166 22 chr2 13724243 13724466 -236963388 + L2 LINE L2 2108 2362 -952 297 377 45 0 chr2 13728096 13728250 -236959604 - MIR3 SINE MIR -3 205 45 242 328 98 25 chr2 13728552 13728674 -236959180 + MIR SINE MIR 17 147 -61 209 306 157 0 chr2 13728694 13728815 -236959039 - MIR SINE MIR 0 262 123 760 293 45 4 chr2 13728838 13729084 -236958770 + MIR SINE MIR 2 257 -5 778 257 71 7 chr2 13729418 13729698 -236958156 + L1MC4 LINE L1 7381 7678 -364 1826 155 0 20 chr2 13729953 13730249 -236957605 + AluSx SINE Alu 1 290 -22 1791 231 20 39 chr2 13730363 13730874 -236956980 - MLT1D LTR MaLR -4 501 1 226 327 36 45 chr2 13731085 13731135 -236956719 + L2 LINE L2 3157 3206 -66 1534 238 79 25 chr2 13731135 13731614 -236956240 + MLT1D LTR MaLR 1 505 0 226 327 36 45 chr2 13731614 13731673 -236956181 + L2 LINE L2 3206 3265 -7 256 250 0 0 chr2 13731675 13731727 -236956127 + GA-rich Low_complexity Low_complexity 4 55 0 1109 165 6 0 chr2 13733386 13733568 -236954286 + Tigger1 DNA MER2_type 2236 2418 0 2193 61 27 24 chr2 13734383 13734680 -236953174 + AluY SINE Alu 1 298 -13 256 272 12 12 chr2 13735758 13735839 -236952015 + (TATATG)n Simple_repeat Simple_repeat 3 83 0 317 266 85 32 chr2 13735919 13736013 -236951841 + L2 LINE L2 3199 3297 -16 1326 254 87 33 chr2 13736182 13736905 -236950949 + L1M4 LINE L1 2402 3163 -2983 950 202 21 0 chr2 13736926 13737114 -236950740 + MLT1C LTR MaLR 276 467 0 314 296 0 0 chr2 13738492 13738590 -236949264 - MLT1-int LTR MaLR -1268 103 6 23 0 0 0 chr2 13739050 13739073 -236948781 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 13739388 13739414 -236948440 + AT_rich Low_complexity Low_complexity 1 26 0 297 0 0 0 chr2 13739470 13739503 -236948351 + (CA)n Simple_repeat Simple_repeat 2 34 0 2505 254 63 6 chr2 13739610 13740247 -236947607 + ERVL LTR ERVL 52 724 -5040 272 284 12 0 chr2 13740256 13740337 -236947517 - MLT1E LTR MaLR -452 141 60 6174 203 20 19 chr2 13740337 13741738 -236946116 - L1P LINE L1 -1679 4467 3065 777 215 50 20 chr2 13741774 13741974 -236945880 - MER3 DNA MER1_type 0 209 4 254 202 281 0 chr2 13742690 13742779 -236945075 + MIR SINE MIR 3 116 -146 2371 78 3 10 chr2 13742792 13743101 -236944753 + AluY SINE Alu 1 307 -4 237 254 0 0 chr2 13743221 13743280 -236944574 + (TTA)n Simple_repeat Simple_repeat 2 60 0 665 320 71 43 chr2 13743708 13744102 -236943752 + MLT1J LTR MaLR 1 405 -106 25 31 0 0 chr2 13744571 13744603 -236943251 + AT_rich Low_complexity Low_complexity 1 32 0 201 290 29 0 chr2 13744677 13744746 -236943108 + (TG)n Simple_repeat Simple_repeat 2 72 0 1129 224 76 7 chr2 13744767 13745070 -236942784 - MER2 DNA MER2_type -1 344 21 350 239 74 103 chr2 13745135 13745378 -236942476 - MER106B DNA MER1_type 0 1059 1 21 36 0 0 chr2 13745896 13745924 -236941930 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 13746295 13746323 -236941531 + AT_rich Low_complexity Low_complexity 1 28 0 291 343 17 35 chr2 13746456 13746628 -236941226 - MIR SINE MIR -74 188 20 284 347 62 34 chr2 13746782 13746958 -236940896 - MIR3 SINE MIR -9 199 19 1463 35 0 0 chr2 13747115 13747289 -236940565 + L1PA3 LINE L1 5978 6151 -4 1595 148 9 99 chr2 13747838 13748182 -236939672 + AluSp SINE Alu 1 313 0 23 68 0 0 chr2 13748183 13748227 -236939627 + AT_rich Low_complexity Low_complexity 1 44 0 1811 144 14 0 chr2 13748777 13749054 -236938800 - AluSp SINE Alu -30 283 3 985 194 0 30 chr2 13749064 13749265 -236938589 + MER3 DNA MER1_type 14 208 -1 365 318 5 78 chr2 13749576 13749768 -236938086 - MIR3 SINE MIR -1 207 30 204 67 0 0 chr2 13750986 13751016 -236936838 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 259 183 0 50 chr2 13752000 13752060 -236935794 - MLT2D LTR ERVL -2 518 462 335 169 14 0 chr2 13752083 13752154 -236935700 + GA-rich Low_complexity Low_complexity 1 72 0 1495 225 25 3 chr2 13752158 13752473 -236935381 - MLT2D LTR ERVL -89 325 4 323 350 62 46 chr2 13753115 13753355 -236934499 - L2 LINE L2 -830 2484 2241 520 293 27 0 chr2 13753860 13754007 -236933847 - MIR SINE MIR -46 216 66 21 36 0 0 chr2 13754292 13754320 -236933534 + AT_rich Low_complexity Low_complexity 1 28 0 9684 50 2 2 chr2 13755459 13756691 -236931163 - L1P LINE L1 -1089 5057 3825 7192 50 3 2 chr2 13756691 13757679 -236930175 + L1PA5 LINE L1 5166 6154 0 31 0 0 0 chr2 13757714 13757745 -236930109 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 13757754 13757778 -236930076 + AT_rich Low_complexity Low_complexity 1 24 0 1036 228 65 45 chr2 13757907 13758263 -236929591 - MLT1A1 LTR MaLR 0 365 3 216 360 171 17 chr2 13758356 13758531 -236929323 - L3 LINE CR1 -69 1508 1307 21 0 0 0 chr2 13758650 13758671 -236929183 + AT_rich Low_complexity Low_complexity 1 21 0 1224 276 123 31 chr2 13759131 13759765 -236928089 + L1M4 LINE L1 1106 1797 -4587 2121 135 36 14 chr2 13759869 13760225 -236927629 - THE1B LTR MaLR 0 364 1 3606 124 83 26 chr2 13760687 13761347 -236926507 - L1PA16 LINE L1 0 6166 5469 385 286 20 27 chr2 13763580 13763727 -236924127 - MIR SINE MIR -25 237 92 259 311 82 37 chr2 13764102 13764237 -236923617 + MIR SINE MIR 53 193 -69 457 355 70 4 chr2 13765366 13765608 -236922246 + MIR SINE MIR 2 259 -3 242 274 78 17 chr2 13765836 13766015 -236921839 - L1M4 LINE L1 -3568 2578 2389 541 277 10 20 chr2 13766048 13766250 -236921604 + L1M4 LINE L1 2961 3160 -3222 * 1003 279 132 25 chr2 13766244 13766826 -236921028 + L1M4 LINE L1 4549 5190 -1192 185 386 10 10 chr2 13767323 13767424 -236920430 + MIR SINE MIR 75 175 -87 581 294 111 67 chr2 13770184 13770528 -236917326 - L2 LINE L2 -3 3310 2952 345 144 39 39 chr2 13771260 13771413 -236916441 + (TA)n Simple_repeat Simple_repeat 2 154 0 339 280 84 71 chr2 13771694 13772286 -236915568 + L1M4 LINE L1 4456 5055 -1091 6644 54 0 53 chr2 13772347 13773365 -236914489 + L1PA6 LINE L1 5214 6181 0 438 319 92 8 chr2 13773420 13773777 -236914077 - L1ME4a LINE L1 -153 5968 5582 378 322 64 25 chr2 13775283 13775519 -236912335 - L1ME LINE L1 -303 5818 5574 243 0 0 0 chr2 13776597 13776624 -236911230 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1347 94 89 52 chr2 13777067 13777280 -236910574 - AluSq SINE Alu -18 295 75 384 216 162 48 chr2 13777346 13777513 -236910341 - L2 LINE L2 0 3313 3128 454 257 65 14 chr2 13777725 13777877 -236909977 + MIR SINE MIR 30 187 -66 425 309 28 46 chr2 13778266 13778483 -236909371 - MIR SINE MIR -3 259 47 516 242 11 54 chr2 13778731 13778917 -236908937 + MER96B DNA MER1_type? 1 178 -239 237 193 193 0 chr2 13778973 13779030 -236908824 - MER58A DNA MER1_type -31 76 9 3711 193 167 62 chr2 13779696 13780907 -236906947 + MER52A LTR ERV1 240 1512 -65 292 138 17 35 chr2 13780902 13780960 -236906894 + MER52C LTR ERV1 1222 1278 0 * 352 192 19 0 chr2 13781112 13781216 -236906638 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 244 279 59 73 chr2 13782990 13783194 -236904660 + LTR67 LTR ERVL 357 557 0 310 234 52 0 chr2 13783690 13783767 -236904087 - MER94 DNA DNA -53 81 1 351 0 0 0 chr2 13784035 13784074 -236903780 + (CA)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr2 13784770 13784792 -236903062 + AT_rich Low_complexity Low_complexity 1 22 0 327 309 24 16 chr2 13785950 13786076 -236901778 - MIR SINE MIR -27 235 109 424 294 120 40 chr2 13786077 13786352 -236901502 + L2 LINE L2 3017 3313 0 390 345 48 62 chr2 13787098 13787388 -236900466 + L2 LINE L2 2987 3272 0 2236 105 3 19 chr2 13788636 13788951 -236898903 - AluSp SINE Alu -3 310 1 212 307 71 39 chr2 13789319 13789446 -236898408 - L2 LINE L2 -1 3312 3182 22 0 0 0 chr2 13789687 13789709 -236898145 + AT_rich Low_complexity Low_complexity 1 22 0 255 273 235 16 chr2 13789945 13790128 -236897726 + LTR16C LTR ERVL 236 458 -33 1011 315 36 8 chr2 13790503 13790868 -236896986 - LTR16A LTR ERVL 0 450 76 285 284 43 26 chr2 13791390 13791506 -236896348 + L2 LINE L2 2945 3062 -251 254 277 188 9 chr2 13791743 13791855 -236895999 + L2 LINE L2 3134 3265 -7 623 284 98 58 chr2 13793318 13793646 -236894208 - LTR67 LTR ERVL -10 547 207 220 109 18 36 chr2 13793880 13793935 -236893919 + (TCTCC)n Simple_repeat Simple_repeat 3 56 0 22 35 0 0 chr2 13795053 13795082 -236892772 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr2 13795610 13795654 -236892200 + AT_rich Low_complexity Low_complexity 1 44 0 1718 253 89 81 chr2 13795756 13795980 -236891874 + L1MC4 LINE L1 5706 5927 -1754 1169 265 95 55 chr2 13795980 13796547 -236891307 - MLT1E LTR MaLR 0 593 4 1718 253 89 81 chr2 13796547 13796601 -236891253 + L1MC4 LINE L1 5927 5979 -1702 336 64 0 0 chr2 13796601 13796648 -236891206 + (CA)n Simple_repeat Simple_repeat 1 47 0 1718 253 89 81 chr2 13796648 13797291 -236890563 + L1MC4 LINE L1 5979 6615 -1066 2354 93 0 0 chr2 13797291 13797601 -236890253 - AluY SINE Alu -1 310 1 1718 253 89 81 chr2 13797601 13798871 -236888983 + L1MC4 LINE L1 6615 7681 0 483 87 0 0 chr2 13799884 13799953 -236887901 + (GGAA)n Simple_repeat Simple_repeat 4 72 0 225 213 120 0 chr2 13799956 13800031 -236887823 + L1MC4a LINE L1 7724 7807 -1 237 234 0 0 chr2 13800187 13800234 -236887620 + GA-rich Low_complexity Low_complexity 1 47 0 299 253 114 44 chr2 13800452 13800610 -236887244 + HAL1 LINE L1 1501 1669 -838 1565 199 107 135 chr2 13801200 13802170 -236885684 + LTR1B LTR ERV1 1 1020 0 234 294 65 22 chr2 13802201 13802293 -236885561 + L2 LINE L2 3137 3232 -40 2041 49 7 6 chr2 13802646 13802933 -236884921 - L1PA3 LINE L1 -248 5907 5660 2103 65 4 0 chr2 13802935 13803211 -236884643 + L1PA3 LINE L1 5879 6155 0 386 293 68 14 chr2 13803621 13803768 -236884086 - MIR SINE MIR -13 249 95 189 351 95 7 chr2 13805235 13805383 -236882471 + MIR SINE MIR 30 190 -72 2665 3 3 0 chr2 13806796 13807085 -236880769 + AluYa5 SINE Alu 1 290 -21 1175 111 5 50 chr2 13807188 13807386 -236880468 - L1PA12 LINE L1 -292 5876 5688 5160 203 14 8 chr2 13807396 13808796 -236879058 - L1PA12 LINE L1 -564 5601 4193 1180 147 0 0 chr2 13808800 13808977 -236878877 + THE1B LTR MaLR 1 177 -187 308 343 105 37 chr2 13809005 13809358 -236878496 - L1MC/D LINE L1 -444 5798 5422 286 238 131 79 chr2 13809786 13810000 -236877854 - L3 LINE CR1 -175 1402 1178 535 323 53 8 chr2 13811497 13811760 -236876094 - LTR16A1 LTR ERVL -11 446 172 234 331 49 25 chr2 13811923 13812086 -236875768 - MIR3 SINE MIR -5 203 37 2652 178 4 13 chr2 13812506 13812967 -236874887 - LTR32 LTR ERVL 0 471 15 215 379 35 17 chr2 13813530 13813646 -236874208 + L3 LINE CR1 1230 1347 -230 2023 145 85 18 chr2 13813672 13814073 -236873781 + MSTA LTR MaLR 1 428 0 21 0 0 0 chr2 13815475 13815496 -236872358 + AT_rich Low_complexity Low_complexity 1 21 0 1415 273 18 32 chr2 13815830 13816614 -236871240 + L1ME2 LINE L1 2999 3746 -2400 1298 221 158 9 chr2 13816647 13816969 -236870885 + MSTB LTR MaLR 1 370 -56 1111 60 7 0 chr2 13816984 13817133 -236870721 - L1PA4 LINE L1 -3 6152 6003 462 73 59 0 chr2 13817162 13817230 -236870624 + MSTB LTR MaLR 357 428 0 949 212 174 22 chr2 13817231 13817553 -236870301 + L1ME2 LINE L1 3785 4171 -1975 267 31 0 0 chr2 13817553 13817585 -236870269 + (TAA)n Simple_repeat Simple_repeat 2 33 0 949 212 174 22 chr2 13817585 13817630 -236870224 + L1ME2 LINE L1 4171 4208 -1938 1482 241 104 32 chr2 13817634 13818164 -236869690 + L1ME2 LINE L1 5586 6153 -11 2218 79 13 13 chr2 13818463 13818768 -236869086 + AluY SINE Alu 1 305 -6 288 384 30 45 chr2 13819181 13819379 -236868475 - MIR3 SINE MIR -6 202 8 333 0 0 0 chr2 13819434 13819471 -236868383 + (CA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr2 13819971 13819992 -236867862 + AT_rich Low_complexity Low_complexity 1 21 0 208 0 0 59 chr2 13820386 13820420 -236867434 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 3306 214 29 42 chr2 13822498 13823320 -236864534 + MER52A LTR ERV1 232 1736 -19 508 238 86 13 chr2 13823335 13823486 -236864368 - MLT1H LTR MaLR -375 174 13 210 293 24 0 chr2 13824296 13824378 -236863476 + (TTCA)n Simple_repeat Simple_repeat 4 87 0 25 0 0 0 chr2 13824645 13824670 -236863184 + AT_rich Low_complexity Low_complexity 1 25 0 6890 97 10 5 chr2 13824950 13826759 -236861095 + L1PA7 LINE L1 4350 6152 -2 480 202 190 11 chr2 13826919 13827163 -236860691 - L1ME2 LINE L1 -203 6030 5712 306 179 16 4 chr2 13827166 13827255 -236860599 - L1P4 LINE L1 -693 5473 5382 1970 252 67 46 chr2 13827271 13828034 -236859820 - L1ME2 LINE L1 -721 5514 4727 735 239 12 12 chr2 13828034 13828201 -236859653 + FAM SINE Alu 2 168 -7 1970 252 67 46 chr2 13828201 13828629 -236859225 - L1ME2 LINE L1 -1508 4727 4310 1234 117 9 72 chr2 13828632 13828855 -236858999 - AluSq SINE Alu 0 313 105 2307 252 65 72 chr2 13828857 13829065 -236858789 - L1ME2 LINE L1 -1932 4283 4075 2250 111 0 0 chr2 13829065 13829372 -236858482 - AluSx SINE Alu -5 307 1 2307 252 65 72 chr2 13829372 13829964 -236857890 - L1ME2 LINE L1 -2140 4075 3480 1881 161 3 0 chr2 13829964 13830262 -236857592 - AluJo SINE Alu -11 301 3 2307 252 65 72 chr2 13830262 13830541 -236857313 - L1ME2 LINE L1 -2735 3480 3201 387 41 0 0 chr2 13830541 13830590 -236857264 + (CA)n Simple_repeat Simple_repeat 2 50 0 1997 176 42 33 chr2 13830600 13831026 -236856828 + Tigger2a DNA MER2_type 2 431 -3 441 0 0 0 chr2 13831029 13831078 -236856776 + (TG)n Simple_repeat Simple_repeat 2 50 0 2307 252 65 72 chr2 13831078 13831457 -236856397 - L1ME2 LINE L1 -3025 3190 2818 975 288 48 6 chr2 13831463 13832084 -236855770 - L1ME2 LINE L1 -3622 2593 1989 944 273 107 38 chr2 13832128 13832948 -236854906 - L1ME2 LINE L1 -4485 1911 1035 2051 193 82 66 chr2 13832961 13833750 -236854104 - MER52A LTR ERV1 -810 945 1 2255 109 0 7 chr2 13834084 13834387 -236853467 - AluSg SINE Alu -9 301 1 245 319 0 28 chr2 13835971 13836043 -236851811 + MIR SINE MIR 51 120 -142 21 36 0 0 chr2 13836162 13836190 -236851664 + AT_rich Low_complexity Low_complexity 1 28 0 522 266 110 12 chr2 13836540 13836713 -236851141 - L2 LINE L2 0 3313 3124 4591 200 23 7 chr2 13837103 13838127 -236849727 + L1 LINE L1 3278 4318 -1828 1966 165 67 20 chr2 13840550 13840955 -236846899 - MSTA LTR MaLR 0 428 5 774 302 36 4 chr2 13840984 13841236 -236846618 + MIR SINE MIR 1 260 -2 643 206 65 13 chr2 13842338 13842493 -236845361 - MIR SINE MIR -37 225 63 248 131 81 19 chr2 13843584 13843744 -236844110 + (TA)n Simple_repeat Simple_repeat 2 171 0 181 191 52 7 chr2 13843755 13843891 -236843963 + (TA)n Simple_repeat Simple_repeat 2 143 0 217 350 106 34 chr2 13844072 13844309 -236843545 - L2 LINE L2 -204 3068 2815 1156 235 26 53 chr2 13845073 13845528 -236842326 - L1MDa LINE L1 -2105 4435 3993 571 233 101 13 chr2 13845561 13845720 -236842134 - FRAM SINE Alu 0 40 1 398 276 114 20 chr2 13845865 13846111 -236841743 - L1MDa LINE L1 -4009 2531 2263 257 258 104 112 chr2 13847119 13847308 -236840546 + LTR41 LTR ERVL 510 698 -75 1550 103 9 5 chr2 13847308 13847522 -236840332 - AluSc SINE Alu -12 297 83 257 258 104 112 chr2 13847522 13847592 -236840262 + LTR41 LTR ERVL 698 767 -6 3082 94 61 2 chr2 13847988 13848447 -236839407 - LTR19A LTR ERV1 0 486 1 1632 143 4 16 chr2 13849002 13849253 -236838601 + AluSx SINE Alu 50 297 -15 284 296 42 22 chr2 13849718 13849823 -236838031 + MIR SINE MIR 39 143 -76 348 24 0 0 chr2 13850536 13850577 -236837277 + (CA)n Simple_repeat Simple_repeat 1 41 0 496 290 105 0 chr2 13850683 13850893 -236836961 + MIR SINE MIR 17 252 -10 539 114 0 11 chr2 13852489 13852577 -236835277 + Tigger2 DNA MER2_type 2399 2485 -233 235 194 81 0 chr2 13852578 13852640 -236835214 - L1MA4 LINE L1 -5 6295 6229 518 200 30 0 chr2 13852640 13852740 -236835114 - U6 snRNA snRNA 0 107 5 738 158 70 6 chr2 13852744 13852915 -236834939 + Tigger2 DNA MER2_type 2473 2654 -64 971 150 0 0 chr2 13852920 13853073 -236834781 - L1PA13 LINE L1 -20 6143 5991 234 191 0 24 chr2 13853080 13853122 -236834732 + Tigger2 DNA MER2_type 2667 2707 -11 1468 246 30 15 chr2 13853791 13854070 -236833784 + MER63B DNA MER1_type 1 289 -773 2201 115 7 0 chr2 13854070 13854374 -236833480 - AluSq SINE Alu -7 306 1 1468 246 30 15 chr2 13854374 13854501 -236833353 + MER63B DNA MER1_type 289 413 -23 4861 148 19 6 chr2 13855068 13856924 -236830930 - L1PA15 LINE L1 -7 6158 4261 381 338 22 22 chr2 13856945 13857081 -236830773 - MIR3 SINE MIR -15 193 58 2024 128 0 10 chr2 13857180 13857478 -236830376 - AluSc SINE Alu -14 295 1 350 317 14 41 chr2 13858750 13858895 -236828959 + L2 LINE L2 3173 3313 0 341 93 35 35 chr2 13858900 13858986 -236828868 + (TATATG)n Simple_repeat Simple_repeat 2 87 0 2158 128 3 10 chr2 13860150 13860462 -236827392 - AluSx SINE Alu -2 310 1 297 284 35 52 chr2 13860600 13860716 -236827138 + L2 LINE L2 3158 3271 -1 2127 143 0 0 chr2 13861065 13861373 -236826481 + AluSx SINE Alu 1 308 -4 258 321 22 44 chr2 13862796 13862933 -236824921 - L2 LINE L2 -213 3059 2926 282 318 88 7 chr2 13863472 13863620 -236824234 - MIR SINE MIR -68 194 35 1983 123 0 14 chr2 13864263 13864592 -236823262 + AluSx SINE Alu 1 325 0 224 246 94 70 chr2 13864620 13864791 -236823063 - MIR SINE MIR 0 262 88 244 314 0 0 chr2 13864871 13864941 -236822913 + MIR SINE MIR 85 154 -108 383 201 2 116 chr2 13865639 13865684 -236822170 + MSTC LTR MaLR 5 54 -342 2094 108 3 29 chr2 13865684 13865990 -236821864 + AluSq SINE Alu 1 298 -15 383 201 2 116 chr2 13865990 13866057 -236821797 + MSTC LTR MaLR 54 110 -286 200 355 78 27 chr2 13867092 13867348 -236820506 + L2 LINE L2 2951 3219 -94 182 272 74 62 chr2 13867367 13867448 -236820406 - MIR3 SINE MIR -17 191 110 259 377 44 6 chr2 13867728 13867887 -236819967 - MIR SINE MIR -12 250 86 248 300 75 17 chr2 13868600 13868720 -236819134 + MIR SINE MIR 81 207 -55 478 196 98 12 chr2 13868720 13868883 -236818971 - Charlie5 DNA MER1_type 0 2624 2448 186 43 0 0 chr2 13869322 13869345 -236818509 + (T)n Simple_repeat Simple_repeat 1 23 0 22 35 0 0 chr2 13869955 13869984 -236817870 + AT_rich Low_complexity Low_complexity 1 29 0 331 276 12 0 chr2 13870011 13870181 -236817673 + (TA)n Simple_repeat Simple_repeat 2 173 0 189 259 99 61 chr2 13870315 13870446 -236817408 + L2 LINE L2 2948 3083 -189 557 216 37 6 chr2 13870491 13870653 -236817201 - HsTC2 DNA Tc2 0 1900 1734 278 319 114 30 chr2 13870657 13870823 -236817031 - HsTC2 DNA Tc2 -1718 180 1 199 273 0 65 chr2 13871038 13871115 -236816739 + L2 LINE L2 3242 3313 0 711 164 40 109 chr2 13871958 13872159 -236815695 + MER5A DNA MER1_type 3 189 0 399 210 11 177 chr2 13872957 13873138 -236814716 + MER63 DNA MER1_type 7 783 -53 425 221 49 0 chr2 13873435 13873557 -236814297 + L1 LINE L1 4109 4236 -1910 204 109 36 18 chr2 13873629 13873684 -236814170 + (TA)n Simple_repeat Simple_repeat 1 56 0 3161 203 27 19 chr2 13873694 13874443 -236813411 + L1 LINE L1 4211 4965 -1181 658 212 0 0 chr2 13874444 13874562 -236813292 + Tigger7 DNA MER2_type 1 118 -615 466 261 119 54 chr2 13874846 13875325 -236812529 + MER34B LTR ERV1 6 565 0 306 211 11 84 chr2 13875326 13875421 -236812433 - MIR SINE MIR -101 161 74 6408 122 26 5 chr2 13875492 13876553 -236811301 + L1PBa LINE L1 1392 2475 -4388 363 44 0 0 chr2 13877258 13877303 -236810551 + (CA)n Simple_repeat Simple_repeat 2 46 0 361 350 145 14 chr2 13877531 13877882 -236809972 - L2 LINE L2 -1882 1432 1036 2807 246 48 14 chr2 13878042 13879014 -236808840 + L1MDa LINE L1 2546 3547 -2993 7089 45 7 6 chr2 13880623 13882272 -236805582 + L1PA4 LINE L1 4504 6155 0 1675 176 54 8 chr2 13882272 13882634 -236805220 + L1PB4 LINE L1 5769 6155 -1 610 338 107 13 chr2 13882638 13883023 -236804831 - ERVL LTR ERVL -948 4816 4396 22 0 0 0 chr2 13883228 13883250 -236804604 + AT_rich Low_complexity Low_complexity 1 22 0 307 312 175 7 chr2 13883450 13883604 -236804250 - LTR16C LTR ERVL -127 364 185 991 162 30 5 chr2 13883674 13883872 -236803982 - MER57B LTR ERV1 0 434 232 411 171 0 0 chr2 13885521 13885626 -236802228 + G-rich Low_complexity Low_complexity 1 105 0 280 304 33 0 chr2 13886553 13886645 -236801209 + MIR SINE MIR 109 203 -59 27 29 0 0 chr2 13886790 13886824 -236801030 + AT_rich Low_complexity Low_complexity 1 34 0 1742 237 86 0 chr2 13887720 13888176 -236799678 - MLT1D LTR MaLR -8 497 3 227 269 62 48 chr2 13888574 13888719 -236799135 + L2 LINE L2 2966 3112 -160 1582 209 94 30 chr2 13889240 13889708 -236798146 - Charlie1b DNA MER1_type -24 499 2 218 260 41 55 chr2 13890666 13890739 -236797115 - L2 LINE L2 -224 3048 2977 21 36 0 0 chr2 13891368 13891396 -236796458 + AT_rich Low_complexity Low_complexity 1 28 0 1360 124 0 0 chr2 13891396 13891606 -236796248 - L1MA1 LINE L1 0 6302 6093 638 217 121 24 chr2 13891871 13892037 -236795817 - MER101B LTR ERV1 -386 184 3 1612 200 113 45 chr2 13892865 13893472 -236794382 + LTR48B LTR ERV1 1 707 0 4111 196 66 39 chr2 13893492 13893686 -236794168 + L1MC3 LINE L1 6655 6842 -943 276 30 0 0 chr2 13893686 13893719 -236794135 + (GA)n Simple_repeat Simple_repeat 1 33 0 4111 196 66 39 chr2 13893719 13894122 -236793732 + L1MC3 LINE L1 6842 7232 -553 1206 209 90 11 chr2 13894122 13894399 -236793455 + AluJo SINE Alu 1 299 -3 4111 196 66 39 chr2 13894399 13894813 -236793041 + L1MC3 LINE L1 7232 7695 -90 373 215 0 0 chr2 13895922 13895987 -236791867 - AluJb SINE Alu -3 299 235 881 157 0 20 chr2 13895987 13896134 -236791720 - AluJb SINE Alu -168 144 1 1060 174 10 0 chr2 13896208 13896404 -236791450 + L1PBa LINE L1 3 200 -6663 755 144 0 0 chr2 13896406 13896524 -236791330 + L1PBa LINE L1 636 753 -6110 * 2537 100 22 0 chr2 13896513 13896883 -236790971 + L1PBa LINE L1 2309 2686 -4177 1091 217 13 0 chr2 13896986 13897216 -236790638 + L1MC1 LINE L1 6101 6333 0 230 284 60 0 chr2 13897993 13898060 -236789794 - L2 LINE L2 -35 3237 3167 1761 170 71 152 chr2 13898163 13898953 -236788901 + LTR8A LTR ERV1 2 727 0 21 0 0 0 chr2 13899442 13899463 -236788391 + AT_rich Low_complexity Low_complexity 1 21 0 4628 20 11 0 chr2 13901211 13901758 -236786096 + L1PA4 LINE L1 5601 6153 -2 198 278 22 56 chr2 13902123 13902213 -236785641 - MIR SINE MIR -123 139 53 192 294 106 0 chr2 13903206 13903291 -236784563 + MIR3 SINE MIR 90 183 -25 377 185 0 0 chr2 13904515 13904596 -236783258 - L1MB7 LINE L1 0 6184 6104 * 3054 236 7 15 chr2 13904593 13905319 -236782535 - L1MB8 LINE L1 -27 6151 5432 274 315 20 54 chr2 13905406 13905555 -236782299 + L1MC5 LINE L1 7751 7894 -67 307 304 33 0 chr2 13906494 13906586 -236781268 - MIR SINE MIR -83 125 31 2367 175 45 7 chr2 13906986 13907431 -236780423 + MLT1C LTR MaLR 4 465 -2 2021 141 0 3 chr2 13907747 13908045 -236779809 - AluSx SINE Alu -15 297 1 324 346 154 34 chr2 13908237 13908529 -236779325 - L3 LINE CR1 -852 725 399 210 338 13 13 chr2 13909811 13909888 -236777966 + MIR SINE MIR 47 123 -139 291 104 0 0 chr2 13909907 13909955 -236777899 + (TG)n Simple_repeat Simple_repeat 2 49 0 1484 165 11 15 chr2 13909999 13910271 -236777583 + AluJb SINE Alu 40 310 -2 240 368 75 11 chr2 13910427 13910601 -236777253 - MER5A DNA MER1_type -3 186 2 525 184 19 0 chr2 13912402 13912505 -236775349 + MER58 DNA MER1_type 2310 2414 -6 1042 206 12 74 chr2 13913106 13913363 -236774491 - MLT1A1 LTR MaLR -124 241 1 272 100 0 20 chr2 13913501 13913551 -236774303 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1064 163 0 16 chr2 13913559 13913749 -236774105 - AluYa5 SINE Alu -19 292 106 954 89 51 25 chr2 13913857 13914015 -236773839 + L1PA5 LINE L1 5932 6093 -61 406 267 41 0 chr2 13914032 13914178 -236773676 + (TATATG)n Simple_repeat Simple_repeat 3 154 0 728 54 0 0 chr2 13914181 13914274 -236773580 + L1PA5 LINE L1 6058 6150 -4 225 132 40 53 chr2 13914521 13914597 -236773257 + (TA)n Simple_repeat Simple_repeat 2 76 0 383 224 0 0 chr2 13914636 13914703 -236773151 - ORSL DNA AcHobo -208 67 1 204 395 12 0 chr2 13914710 13914796 -236773058 + L2 LINE L2 2967 3053 -219 321 208 0 0 chr2 13915441 13915518 -236772336 + (TA)n Simple_repeat Simple_repeat 1 77 0 333 222 17 131 chr2 13917324 13917385 -236770469 + MER69A DNA AcHobo 1 67 -2459 1723 119 119 0 chr2 13917385 13917653 -236770201 - AluSg SINE Alu 0 300 1 333 222 17 131 chr2 13917653 13917767 -236770087 + MER69A DNA AcHobo 67 156 -21 268 355 91 69 chr2 13917886 13918067 -236769787 + L2 LINE L2 2837 3013 -259 1995 115 20 14 chr2 13918067 13918363 -236769491 + AluSx SINE Alu 1 298 -14 268 355 91 69 chr2 13918363 13918589 -236769265 + L2 LINE L2 3013 3253 -19 380 314 29 58 chr2 13919105 13919242 -236768612 - L2 LINE L2 -7 3265 3133 2411 144 30 37 chr2 13919300 13919731 -236768123 - MSTC LTR MaLR 0 428 1 257 305 150 18 chr2 13919817 13919984 -236767870 - L2 LINE L2 -523 2791 2603 369 329 111 5 chr2 13920779 13920986 -236766868 + MIR SINE MIR 17 245 -17 337 316 34 26 chr2 13922287 13922404 -236765450 + MER5B DNA MER1_type 1 118 -60 387 232 19 13 chr2 13922506 13922661 -236765193 + (TATATG)n Simple_repeat Simple_repeat 3 158 0 2336 140 40 55 chr2 13922673 13923167 -236764687 + L1MA9 LINE L1 5821 6307 -5 189 195 0 0 chr2 13923195 13923236 -236764618 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 1162 190 37 48 chr2 13923237 13923505 -236764349 - L1MD2 LINE L1 -43 6316 6052 263 368 66 33 chr2 13924386 13924489 -236763365 - L2 LINE L2 0 3272 3161 2475 104 69 46 chr2 13924489 13924879 -236762975 + MLT2A1 LTR ERVL 1 403 -41 309 51 0 0 chr2 13924879 13924918 -236762936 + (TG)n Simple_repeat Simple_repeat 2 40 0 2475 104 69 46 chr2 13924918 13924961 -236762893 + MLT2A1 LTR ERVL 403 444 0 263 368 66 33 chr2 13924961 13925009 -236762845 - L2 LINE L2 -111 3161 3116 215 264 24 16 chr2 13925749 13925874 -236761980 + (TTA)n Simple_repeat Simple_repeat 3 128 0 232 271 83 31 chr2 13925964 13926060 -236761794 - MIR SINE MIR -66 142 42 186 143 0 0 chr2 13926393 13926428 -236761426 + (CA)n Simple_repeat Simple_repeat 2 36 0 326 359 51 18 chr2 13926538 13926697 -236761157 + MIR SINE MIR 25 194 -68 2355 69 10 0 chr2 13926697 13926987 -236760867 + AluSc SINE Alu 1 293 -16 326 359 51 18 chr2 13926987 13927044 -236760810 + MIR SINE MIR 194 248 -14 226 122 41 20 chr2 13927475 13927524 -236760330 + GA-rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr2 13927901 13927930 -236759924 + AT_rich Low_complexity Low_complexity 1 29 0 512 262 125 12 chr2 13928002 13928170 -236759684 - MER5A DNA MER1_type -2 187 1 2218 108 0 3 chr2 13928357 13928654 -236759200 + AluSc SINE Alu 1 296 -13 206 367 0 0 chr2 13929276 13929336 -236758518 + MIR SINE MIR 87 146 -62 24 32 0 0 chr2 13930397 13930428 -236757426 + AT_rich Low_complexity Low_complexity 1 31 0 275 281 34 0 chr2 13930715 13930804 -236757050 + MIR3 SINE MIR 111 202 -6 373 295 58 43 chr2 13931262 13931401 -236756453 - MIR3 SINE MIR -47 161 21 197 359 51 0 chr2 13932865 13932943 -236754911 + MIR3 SINE MIR 79 160 -48 262 360 36 0 chr2 13933147 13933258 -236754596 - L2 LINE L2 0 3272 3158 232 313 32 114 chr2 13933632 13933878 -236753976 - L2 LINE L2 -491 2823 2598 239 256 47 35 chr2 13934674 13934760 -236753094 + L3 LINE CR1 1348 1434 -143 2543 91 3 11 chr2 13934769 13935130 -236752724 - L1PA8 LINE L1 0 6172 5815 226 307 95 44 chr2 13935152 13935289 -236752565 + MIR SINE MIR 50 193 -69 345 304 156 49 chr2 13936770 13937218 -236750636 - L2 LINE L2 -632 2682 2187 1828 182 3 3 chr2 13937994 13938302 -236749552 - AluJb SINE Alu -4 308 1 191 328 35 26 chr2 13938533 13938649 -236749205 + MIR3 SINE MIR 63 179 -29 218 277 60 12 chr2 13939633 13939716 -236748138 + MIR SINE MIR 17 103 -105 1775 158 3 11 chr2 13941048 13941372 -236746482 + AluSx SINE Alu 1 322 0 186 375 80 9 chr2 13941901 13942013 -236745841 + L2 LINE L2 3116 3235 -37 246 128 0 0 chr2 13942205 13942244 -236745610 + (GGATG)n Simple_repeat Simple_repeat 1 39 0 344 296 0 0 chr2 13942315 13942403 -236745451 - MIR SINE MIR -23 239 152 4305 205 103 16 chr2 13942456 13943730 -236744124 - Charlie1a DNA MER1_type -48 1407 24 286 290 100 10 chr2 13943755 13943855 -236743999 - MIR SINE MIR -120 142 34 1243 292 112 72 chr2 13944389 13945536 -236742318 + L2 LINE L2 1571 2762 -552 441 306 169 31 chr2 13945587 13945943 -236741911 + L2 LINE L2 2888 3292 -21 1943 133 3 7 chr2 13946061 13946347 -236741507 + AluSx SINE Alu 1 285 -27 10133 184 12 7 chr2 13946565 13949895 -236737959 + L1PB1 LINE L1 2803 6149 -2 341 319 0 0 chr2 13949920 13950011 -236737843 - MIR SINE MIR -170 92 2 401 304 37 51 chr2 13950363 13950464 -236737390 - MIR SINE MIR -1 261 160 1935 168 123 8 chr2 13950464 13950846 -236737008 - MSTA LTR MaLR 0 428 3 401 304 37 51 chr2 13950846 13950958 -236736896 - MIR SINE MIR -102 160 51 211 373 48 24 chr2 13950980 13951106 -236736748 - L2 LINE L2 -257 3015 2887 2444 144 67 8 chr2 13951218 13951620 -236736234 + MSTA LTR MaLR 3 428 0 21 57 0 0 chr2 13952263 13952298 -236735556 + AT_rich Low_complexity Low_complexity 1 35 0 2181 134 0 6 chr2 13952358 13952671 -236735183 + AluSx SINE Alu 1 311 -1 181 362 0 0 chr2 13952673 13952731 -236735123 - MIR SINE MIR -162 100 43 533 290 70 11 chr2 13953842 13954028 -236733826 - MIR SINE MIR -15 247 51 723 209 55 0 chr2 13954228 13954391 -236733463 - L1PA16 LINE L1 -4 6162 5991 327 265 56 31 chr2 13954715 13954877 -236732977 + MLT1C LTR MaLR 302 467 0 270 81 0 0 chr2 13955266 13955303 -236732551 + (CA)n Simple_repeat Simple_repeat 2 38 0 2031 149 49 0 chr2 13955849 13956199 -236731655 + L1MC1 LINE L1 5459 5825 -508 2066 153 8 6 chr2 13956317 13956676 -236731178 + L1PA13 LINE L1 5788 6147 -16 25 0 0 0 chr2 13956680 13956705 -236731149 + AT_rich Low_complexity Low_complexity 1 25 0 557 191 71 0 chr2 13956760 13956886 -236730968 - MER45A DNA AcHobo 0 178 44 276 351 77 62 chr2 13956953 13957212 -236730642 + L2 LINE L2 3006 3268 -4 23 0 0 0 chr2 13957334 13957357 -236730497 + AT_rich Low_complexity Low_complexity 1 23 0 189 390 52 19 chr2 13958055 13958209 -236729645 - MER5A DNA MER1_type -7 182 24 7185 103 9 22 chr2 13958560 13959645 -236728209 - MER11C LTR ERVK 0 1071 1 313 273 80 0 chr2 13959851 13959939 -236727915 + L2 LINE L2 3219 3313 0 484 316 85 16 chr2 13959988 13960295 -236727559 - LTR16A LTR ERVL -8 442 115 3852 164 10 13 chr2 13960642 13961355 -236726499 - MER50 LTR ERV1 -23 711 1 201 143 0 0 chr2 13964947 13964982 -236722872 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 210 194 0 0 chr2 13965372 13965434 -236722420 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 591 157 86 60 chr2 13965573 13965756 -236722098 + MLT1B LTR MaLR 8 180 -194 1520 155 26 3 chr2 13966719 13967023 -236720831 - L1MA1 LINE L1 -58 6244 5934 1048 170 12 69 chr2 13967307 13967432 -236720422 + MER96B DNA MER1_type? 3 109 -308 2380 90 7 0 chr2 13967432 13967731 -236720123 + AluSq SINE Alu 1 301 -12 1048 170 12 69 chr2 13967731 13967852 -236720002 + MER96B DNA MER1_type? 109 235 -182 283 361 80 53 chr2 13970401 13970664 -236717190 - L2 LINE L2 -576 2738 2469 1361 209 46 19 chr2 13971014 13971469 -236716385 + MLT2A2 LTR ERVL 2 475 -40 388 89 33 22 chr2 13971469 13971559 -236716295 + (TA)n Simple_repeat Simple_repeat 2 92 0 331 111 0 0 chr2 13971559 13971613 -236716241 + MLT2A2 LTR ERVL 400 453 0 184 348 43 31 chr2 13971651 13971812 -236716042 + L2 LINE L2 2796 2958 -356 2770 256 23 56 chr2 13972100 13973388 -236714466 - L1M2 LINE L1 -2805 3577 2329 2541 223 57 16 chr2 13973404 13974126 -236713728 + L1M2 LINE L1 3571 4329 -2053 2149 85 17 0 chr2 13974126 13974419 -236713435 + AluY SINE Alu 1 298 -13 2541 223 57 16 chr2 13974419 13974489 -236713365 + L1M2 LINE L1 4329 4395 -1987 1301 169 66 42 chr2 13974617 13974961 -236712893 + Tigger7 DNA MER2_type 129 2431 -56 6474 194 127 29 chr2 13974961 13976560 -236711294 + MER52A LTR ERV1 1 1755 0 253 267 17 0 chr2 13976560 13976618 -236711236 + Tigger7 DNA MER2_type 2428 2486 -1 2373 192 27 10 chr2 13976621 13977426 -236710428 + L1M2 LINE L1 5203 6022 -526 353 344 23 0 chr2 13977988 13978116 -236709738 - L2 LINE L2 0 3313 3183 847 167 48 0 chr2 13979285 13979471 -236708383 + L1MA4A LINE L1 6098 6292 -11 198 407 11 0 chr2 13979588 13979679 -236708175 - MIR SINE MIR -77 131 40 13878 181 27 19 chr2 13979987 13982177 -236705677 + L1PA14 LINE L1 2049 4280 -1881 423 0 0 0 chr2 13982177 13982224 -236705630 + (TG)n Simple_repeat Simple_repeat 2 48 0 13878 181 27 19 chr2 13982224 13984122 -236703732 + L1PA14 LINE L1 4280 6161 0 360 64 0 0 chr2 13984163 13984210 -236703644 + (TG)n Simple_repeat Simple_repeat 2 48 0 262 281 110 12 chr2 13984283 13984365 -236703489 + MIR SINE MIR 30 119 -89 555 201 140 49 chr2 13985024 13985188 -236702666 + AluJb SINE Alu 134 312 0 277 195 11 23 chr2 13985196 13985283 -236702571 + GA-rich Low_complexity Low_complexity 5 90 0 1260 126 0 11 chr2 13987032 13987206 -236700648 - AluSg/x SINE Alu -9 303 132 507 247 135 28 chr2 13987214 13987392 -236700462 - ERVL LTR ERVL -691 5073 4877 2437 191 55 3 chr2 13987433 13987582 -236700272 + L1 LINE L1 4000 4140 -2006 216 0 0 0 chr2 13987582 13987606 -236700248 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 2437 191 55 3 chr2 13987606 13988033 -236699821 + L1 LINE L1 4140 4606 -1540 1071 239 71 13 chr2 13988057 13988430 -236699424 + L1 LINE L1 4950 5347 -799 180 0 0 0 chr2 13988430 13988450 -236699404 + (CTTG)n Simple_repeat Simple_repeat 2 21 0 1591 175 17 10 chr2 13988456 13988856 -236698998 - AluJo SINE Alu 0 407 6 2281 158 16 13 chr2 13988859 13989306 -236698548 + L1P5 LINE L1 5338 5785 -371 2050 85 17 30 chr2 13989306 13989601 -236698253 + AluY SINE Alu 1 291 -20 3631 26 2 0 chr2 13989606 13990058 -236697796 + L1P LINE L1 3424 3876 -2270 277 264 18 18 chr2 13990158 13990268 -236697586 - ERVL LTR ERVL -1676 4088 3979 406 299 62 42 chr2 13990540 13991637 -236696217 + L1ME LINE L1 4370 5494 -670 495 193 35 0 chr2 13992551 13992696 -236695158 + GA-rich Low_complexity Low_complexity 1 150 0 252 198 25 12 chr2 13994022 13994103 -236693751 + CT-rich Low_complexity Low_complexity 1 82 0 925 213 88 0 chr2 13994115 13994331 -236693523 - MLT1D LTR MaLR -270 235 1 2068 215 86 35 chr2 13994331 13995108 -236692746 + L1MDa LINE L1 1686 2502 -4038 2020 178 0 0 chr2 13995137 13995446 -236692408 + AluSx SINE Alu 1 309 -3 1650 191 0 51 chr2 13995575 13995890 -236691964 - AluJo SINE Alu -13 299 1 311 276 24 47 chr2 13996010 13996137 -236691717 - MIR SINE MIR -112 150 27 246 341 57 51 chr2 13997095 13997271 -236690583 + MIR3 SINE MIR 30 206 -2 309 333 24 16 chr2 13997574 13997697 -236690157 - MIR3 SINE MIR -83 125 2 203 327 82 9 chr2 13998680 13998790 -236689064 + MIR SINE MIR 33 150 -58 503 341 17 17 chr2 14000022 14000201 -236687653 + MIR SINE MIR 2 180 -82 295 289 248 8 chr2 14000224 14000345 -236687509 + L3 LINE CR1 1411 1560 -17 335 250 36 91 chr2 14000491 14000717 -236687137 + MIR SINE MIR 10 216 -46 1051 157 47 51 chr2 14002229 14002271 -236685583 + MER92B LTR ERV1 1 42 -594 2067 117 14 51 chr2 14002271 14002621 -236685233 + MER1B DNA MER1_type 1 337 0 1051 157 47 51 chr2 14002621 14002813 -236685041 + MER92B LTR ERV1 42 234 -402 461 178 47 0 chr2 14002819 14002926 -236684928 + MER92B LTR ERV1 525 636 0 190 321 124 37 chr2 14003586 14003804 -236684050 + MIR SINE MIR 20 256 -6 320 243 209 10 chr2 14004309 14004515 -236683339 + L1MC4 LINE L1 6459 6705 -1337 213 293 10 10 chr2 14004557 14004656 -236683198 + (TA)n Simple_repeat Simple_repeat 1 99 0 1850 260 54 11 chr2 14004657 14005300 -236682554 + L1MC4 LINE L1 6654 7324 -718 1549 217 42 17 chr2 14005310 14005715 -236682139 - LTR52 LTR ERVL -2 419 5 3409 258 32 21 chr2 14005720 14006709 -236681145 - LTR52-int LTR ERVL -1 3555 2328 1973 189 80 133 chr2 14006729 14007525 -236680329 - LTR28 LTR ERV1 0 1020 119 296 199 92 61 chr2 14007540 14007671 -236680183 - MER61B LTR ERV1 -290 135 1 880 221 0 44 chr2 14007671 14007897 -236679957 - LTR52-int LTR ERVL -1130 2426 2211 488 273 28 0 chr2 14007913 14008056 -236679798 + LTR52 LTR ERVL 259 405 -16 1478 233 68 68 chr2 14008069 14008777 -236679077 + L1MC4 LINE L1 7328 8035 -7 1479 247 100 18 chr2 14009019 14009794 -236678060 + L1ME3 LINE L1 5254 6118 -44 2195 115 3 0 chr2 14009897 14010193 -236677661 + AluSq SINE Alu 1 297 -16 7422 45 0 0 chr2 14011109 14012026 -236675828 + L1PA5 LINE L1 5235 6151 -3 328 294 89 44 chr2 14012032 14012212 -236675642 + L2 LINE L2 2619 2806 -508 4986 183 23 12 chr2 14013725 14015241 -236672613 + L1MA9 LINE L1 4784 6312 0 2503 139 10 17 chr2 14016108 14016524 -236671330 - MSTB LTR MaLR -10 405 5 1807 191 32 30 chr2 14016547 14017102 -236670752 + MLT2A2 LTR ERVL 3 554 0 5539 185 53 26 chr2 14017108 14018711 -236669143 - MLT1A1-int LTR MaLR -19 1632 6 202 329 12 12 chr2 14018797 14018882 -236668972 + MIR SINE MIR 53 137 -125 3697 208 32 11 chr2 14018917 14019901 -236667953 - Charlie1a DNA MER1_type 0 1455 372 1442 207 138 12 chr2 14019901 14020307 -236667547 + MER119 DNA MER1_type 1 457 -126 * 3797 149 42 8 chr2 14020284 14021022 -236666832 + Tigger3(Golem) DNA MER2_type 2266 3028 -1 1325 232 68 11 chr2 14021143 14021497 -236666357 - Charlie1a DNA MER1_type -1077 378 5 207 0 0 0 chr2 14021746 14021769 -236666085 + (T)n Simple_repeat Simple_repeat 1 23 0 1134 347 15 15 chr2 14022756 14023301 -236664553 - ERVL LTR ERVL -516 5248 4704 296 205 39 128 chr2 14023471 14023627 -236664227 - MLT1A1 LTR MaLR 0 396 255 577 200 63 117 chr2 14023686 14023891 -236663963 - MLT1A1 LTR MaLR -171 194 1 2625 245 113 78 chr2 14023891 14025145 -236662709 - MLT1A1-int LTR MaLR 0 1651 383 2161 126 3 3 chr2 14025145 14025447 -236662407 - AluSg SINE Alu -8 302 1 2625 245 113 78 chr2 14025447 14025842 -236662012 - MLT1A1-int LTR MaLR -1268 383 3 836 236 10 10 chr2 14025843 14026038 -236661816 - MLT1A1 LTR MaLR 0 365 171 893 182 25 45 chr2 14026053 14026251 -236661603 - MLT1A1 LTR MaLR -171 194 1 1438 188 177 24 chr2 14026356 14026787 -236661067 + MER66A LTR ERV1 97 474 -4 1372 235 92 40 chr2 14026795 14027319 -236660535 + MER66A-int LTR ERV1 1 551 -6125 7625 229 27 20 chr2 14027420 14030039 -236657815 + MER66A-int LTR ERV1 737 3120 -3211 436 236 0 18 chr2 14030017 14030127 -236657727 + MER66A-int LTR ERV1 3337 3444 -3232 * 394 273 9 0 chr2 14030065 14030175 -236657679 + LTR57-int LTR ERVL 1319 1429 -3914 * 1805 214 30 90 chr2 14030177 14030912 -236656942 + MER66A-int LTR ERV1 3744 4434 -2242 1482 228 0 0 chr2 14030927 14031234 -236656620 + AluJb SINE Alu 1 307 0 275 241 76 25 chr2 14031235 14031314 -236656540 + MER4B LTR ERV1 79 161 -449 386 225 58 58 chr2 14031315 14031453 -236656401 + MER66A-int LTR ERV1 5915 6052 -1704 2459 171 5 2 chr2 14031454 14031880 -236655974 + MER66A-int LTR ERV1 6250 6676 0 1473 196 72 56 chr2 14031917 14032369 -236655485 + MER66A LTR ERV1 97 478 0 669 333 44 43 chr2 14032997 14033355 -236654499 - HERVL LTR ERVL -1796 3702 3346 1157 240 66 6 chr2 14033355 14033672 -236654182 - MER58B DNA MER1_type -4 337 2 669 333 44 43 chr2 14033672 14034079 -236653775 - HERVL LTR ERVL -2152 3346 2939 282 266 48 8 chr2 14034199 14034323 -236653531 - L1ME3 LINE L1 -11 6151 6023 310 238 79 0 chr2 14034389 14034490 -236653364 - L1ME3 LINE L1 -272 5890 5782 2053 146 0 7 chr2 14034672 14034980 -236652874 + AluSq SINE Alu 1 306 -7 23 0 0 0 chr2 14035248 14035271 -236652583 + AT_rich Low_complexity Low_complexity 1 23 0 475 312 13 51 chr2 14135778 14135935 -236551919 + MIR3 SINE MIR 27 177 -31 1352 220 60 26 chr2 14136166 14136250 -236551604 + MLT1A1 LTR MaLR 1 81 -284 1603 67 0 14 chr2 14136250 14136459 -236551395 + AluY SINE Alu 105 310 -1 1352 220 60 26 chr2 14136459 14136724 -236551130 + MLT1A1 LTR MaLR 81 362 -3 549 263 130 8 chr2 14140033 14140196 -236547658 + MIR SINE MIR 3 182 -80 391 247 38 38 chr2 14141405 14141563 -236546291 + L1ME4a LINE L1 5725 5882 -239 263 318 130 21 chr2 14142221 14142413 -236545441 - MIR SINE MIR 0 262 50 948 190 63 0 chr2 14142700 14142874 -236544980 - L1PB4 LINE L1 0 6156 5972 222 239 128 9 chr2 14143055 14143164 -236544690 - MIR SINE MIR -15 247 126 624 303 83 37 chr2 14143237 14143804 -236544050 + L1ME4a LINE L1 5512 6104 -17 282 73 0 0 chr2 14144867 14144908 -236542946 + (TC)n Simple_repeat Simple_repeat 2 42 0 2086 229 29 44 chr2 14145036 14145561 -236542293 + MLT2B3 LTR ERVL 1 517 -37 407 188 0 35 chr2 14145563 14145648 -236542206 + MLT2A1 LTR ERVL 361 442 -2 226 261 54 0 chr2 14145919 14146011 -236541843 + GA-rich Low_complexity Low_complexity 3 99 0 853 192 0 0 chr2 14146469 14146599 -236541255 - FRAM SINE Alu -38 138 9 277 312 81 102 chr2 14147497 14147607 -236540247 + MIR3 SINE MIR 17 123 -85 1173 203 74 7 chr2 14147607 14147903 -236539951 + MER33 DNA MER1_type 5 320 -4 277 312 81 102 chr2 14147903 14147978 -236539876 + MIR3 SINE MIR 123 198 -10 250 312 9 46 chr2 14148920 14149029 -236538825 - MER20B DNA MER1_type -642 141 37 269 287 8 74 chr2 14149886 14150008 -236537846 - MIR3 SINE MIR -36 172 59 2940 112 44 34 chr2 14150347 14150852 -236537002 + MLT2A1 LTR ERVL 1 519 -1 1785 157 13 0 chr2 14151627 14151927 -236535927 - L1MB1 LINE L1 -122 6046 5743 622 149 70 0 chr2 14151927 14152031 -236535823 + L1MB1 LINE L1 6047 6168 0 267 229 16 0 chr2 14152051 14152112 -236535742 + MIR SINE MIR 198 259 -3 2197 120 3 0 chr2 14152141 14152441 -236535413 + AluSq SINE Alu 1 301 -12 841 209 18 0 chr2 14152965 14153128 -236534726 + FRAM SINE Alu 1 166 0 23 0 0 0 chr2 14153168 14153191 -236534663 + AT_rich Low_complexity Low_complexity 1 23 0 324 224 88 20 chr2 14153217 14153364 -236534490 + L1MDb LINE L1 1194 1350 -5059 426 223 47 47 chr2 14153403 14153551 -236534303 + L1M4 LINE L1 4203 4350 -1796 216 342 90 34 chr2 14153757 14153991 -236533863 + L2 LINE L2 2989 3235 -37 268 278 56 68 chr2 14154311 14154473 -236533381 + MIR SINE MIR 89 248 -14 2321 67 0 41 chr2 14154554 14154869 -236532985 + AluY SINE Alu 1 302 -9 1088 141 6 0 chr2 14154879 14155049 -236532805 + AluSg/x SINE Alu 142 312 0 456 227 45 9 chr2 14156971 14157081 -236530773 - MLT1I LTR MaLR 0 409 296 1404 213 59 0 chr2 14157625 14157898 -236529956 - AluSx SINE Alu -23 289 1 23 0 0 0 chr2 14158773 14158796 -236529058 + AT_rich Low_complexity Low_complexity 1 23 0 420 147 0 0 chr2 14159333 14159408 -236528446 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 253 293 54 27 chr2 14159681 14159828 -236528026 - L1ME3A LINE L1 -15 6155 6005 363 284 0 20 chr2 14160398 14160500 -236527354 - MIR3 SINE MIR -26 182 83 2114 136 3 0 chr2 14160969 14161278 -236526576 - AluSx SINE Alu -2 310 1 1514 166 147 3 chr2 14161658 14161971 -236525883 + MER46B DNA MER2_type 1 233 -3 399 344 22 28 chr2 14161984 14162164 -236525690 - MIR3 SINE MIR -15 193 15 215 167 24 0 chr2 14162292 14162334 -236525520 + MIR SINE MIR 108 150 -112 220 277 46 0 chr2 14162415 14162480 -236525374 + MIR SINE MIR 81 148 -114 420 313 8 15 chr2 14163780 14163914 -236523940 - MER5B DNA MER1_type -42 136 4 205 146 42 0 chr2 14164138 14164186 -236523668 + (TA)n Simple_repeat Simple_repeat 2 51 0 287 268 12 12 chr2 14165249 14165331 -236522523 - MLT1I LTR MaLR -6 403 322 267 224 95 82 chr2 14165500 14165647 -236522207 - MLT1J2 LTR MaLR -301 149 1 180 328 78 16 chr2 14165682 14165746 -236522108 - L2 LINE L2 -229 3084 3017 206 316 45 51 chr2 14166002 14166179 -236521675 + L2 LINE L2 2435 2610 -704 744 168 41 77 chr2 14166190 14166386 -236521468 + MLT1A2 LTR MaLR 13 201 -164 2212 141 29 6 chr2 14166396 14166743 -236521111 - THE1A LTR MaLR 0 355 1 2266 69 14 0 chr2 14166743 14167033 -236520821 - THE1A-int LTR MaLR 0 1580 1287 775 218 26 0 chr2 14167033 14167189 -236520665 + MLT1A2 LTR MaLR 215 374 0 280 321 115 48 chr2 14167368 14167698 -236520156 + L2 LINE L2 2916 3267 -5 1812 106 0 109 chr2 14167881 14168202 -236519652 + AluSc SINE Alu 3 288 -21 647 338 14 0 chr2 14168207 14168417 -236519437 - MIR SINE MIR -8 254 42 706 339 77 50 chr2 14169083 14169473 -236518381 - L2 LINE L2 0 3272 2894 2079 123 0 0 chr2 14169473 14169791 -236518063 + AluSx SINE Alu 1 318 0 706 339 77 50 chr2 14169791 14171058 -236516796 - L2 LINE L2 -378 2894 1496 191 327 67 19 chr2 14171217 14171321 -236516533 + MIR3 SINE MIR 4 112 -96 442 291 16 16 chr2 14171528 14171655 -236516199 - MER5A DNA MER1_type -23 166 40 1119 234 58 69 chr2 14172944 14173393 -236514461 - MLT1J2 LTR MaLR 0 450 7 603 272 113 25 chr2 14174057 14174296 -236513558 - MIR SINE MIR 0 262 3 223 303 0 30 chr2 14175365 14175431 -236512423 + MIR SINE MIR 82 145 -63 183 156 0 0 chr2 14176718 14176750 -236511104 + (CGGAG)n Simple_repeat Simple_repeat 1 32 0 212 158 0 0 chr2 14177226 14177264 -236510590 + (CA)n Simple_repeat Simple_repeat 2 39 0 189 107 0 0 chr2 14180138 14180166 -236507688 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 189 0 0 0 chr2 14181505 14181526 -236506328 + (A)n Simple_repeat Simple_repeat 1 21 0 237 224 0 0 chr2 14182245 14182303 -236505551 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 225 0 0 0 chr2 14182469 14182494 -236505360 + (CA)n Simple_repeat Simple_repeat 2 26 0 673 154 51 82 chr2 14184280 14184475 -236503379 + MER53 DNA DNA 1 189 0 195 357 116 21 chr2 14184974 14185243 -236502611 + L2 LINE L2 2760 3047 -225 226 384 26 20 chr2 14189244 14189395 -236498459 - MIR SINE MIR -79 183 32 1425 202 91 20 chr2 14190834 14191175 -236496679 + MLT1A1 LTR MaLR 1 365 0 1718 223 84 12 chr2 14191622 14192110 -236495744 - Charlie1b DNA MER1_type 0 523 1 1972 184 17 6 chr2 14193122 14193475 -236494379 + MLT1A1 LTR MaLR 2 358 -7 600 318 23 10 chr2 14193964 14194266 -236493588 - L1ME4a LINE L1 -218 5903 5598 736 299 36 21 chr2 14194771 14195158 -236492696 - L1ME LINE L1 -530 5574 5189 1816 117 4 0 chr2 14195381 14195657 -236492197 + AluY SINE Alu 34 310 0 473 265 89 63 chr2 14195877 14196233 -236491621 - L1ME LINE L1 -1094 4986 4606 620 305 5 5 chr2 14196243 14196443 -236491411 - L1ME LINE L1 -1979 4101 3902 1884 266 77 7 chr2 14196448 14197046 -236490808 + L1ME3A LINE L1 5446 6085 -85 27 29 0 0 chr2 14197046 14197080 -236490774 + AT_rich Low_complexity Low_complexity 1 34 0 346 341 14 7 chr2 14197200 14197338 -236490516 + MIR3 SINE MIR 59 197 -11 1435 219 42 28 chr2 14197567 14197927 -236489927 - MLT1A1 LTR MaLR 0 365 1 585 289 107 39 chr2 14198250 14198614 -236489240 + MLT1J LTR MaLR 123 511 0 796 278 92 48 chr2 14199296 14199667 -236488187 - L2 LINE L2 -7 3306 2920 218 256 0 0 chr2 14200188 14200227 -236487627 - L2 LINE L2 -33 3239 3201 279 294 179 32 chr2 14200374 14200592 -236487262 + MIR SINE MIR 13 262 0 345 238 12 0 chr2 14200759 14200843 -236487011 - HsTC2 DNA Tc2 -1808 90 6 733 258 129 7 chr2 14201232 14201980 -236485874 - L1ME LINE L1 -3242 2838 1923 920 304 86 54 chr2 14201990 14203574 -236484280 - L1ME LINE L1 -4376 1885 3 263 295 71 45 chr2 14203583 14203695 -236484159 + MER5B DNA MER1_type 41 155 -23 27 0 0 0 chr2 14204236 14204263 -236483591 + AT_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr2 14204449 14204483 -236483371 + AT_rich Low_complexity Low_complexity 1 34 0 327 25 0 0 chr2 14205245 14205285 -236482569 + (TG)n Simple_repeat Simple_repeat 2 41 0 2782 40 0 0 chr2 14205456 14205806 -236482048 - L1PA2 LINE L1 -838 5308 4959 7552 9 2 0 chr2 14205806 14206663 -236481191 + L1PA2 LINE L1 5295 6155 0 311 258 43 86 chr2 14207667 14207853 -236480001 - L1ME LINE L1 -532 5589 5412 27 62 0 0 chr2 14207892 14207940 -236479914 + AT_rich Low_complexity Low_complexity 1 48 0 252 122 0 0 chr2 14207940 14207981 -236479873 + (TA)n Simple_repeat Simple_repeat 2 42 0 958 155 7 7 chr2 14207982 14208137 -236479717 - AluSg/x SINE Alu -21 291 137 246 164 0 0 chr2 14208310 14208365 -236479489 + (TA)n Simple_repeat Simple_repeat 1 55 0 321 345 20 14 chr2 14208542 14208690 -236479164 - LTR67 LTR ERVL -1 556 408 1009 264 28 12 chr2 14208952 14209206 -236478648 - MIR SINE MIR -1 261 4 180 74 0 0 chr2 14209408 14209435 -236478419 + L2 LINE L2 3287 3313 0 560 259 52 60 chr2 14209491 14209723 -236478131 + LTR33 LTR ERVL 1 230 -291 456 235 0 26 chr2 14209832 14209947 -236477907 + LTR33 LTR ERVL 385 496 -25 31 0 0 0 chr2 14210106 14210137 -236477717 + AT_rich Low_complexity Low_complexity 1 31 0 566 292 84 100 chr2 14210157 14211050 -236476804 - L1ME LINE L1 -1605 4541 3660 407 284 140 54 chr2 14213109 14213574 -236474280 - MLT1H LTR MaLR -15 534 30 317 372 100 46 chr2 14213967 14214206 -236473648 + L2 LINE L2 3021 3272 0 309 265 25 86 chr2 14214377 14214539 -236473315 + MIR3 SINE MIR 51 202 -6 501 314 47 21 chr2 14216347 14216538 -236471316 + MIR3 SINE MIR 1 196 -12 516 263 137 21 chr2 14216585 14216775 -236471079 - MIR SINE MIR -23 239 28 273 299 95 8 chr2 14216868 14216998 -236470856 - MIR3 SINE MIR -44 164 21 320 287 77 21 chr2 14217355 14217498 -236470356 - MIR3 SINE MIR -9 199 49 2201 125 3 0 chr2 14217519 14217830 -236470024 - AluSx SINE Alu 0 312 1 278 221 79 142 chr2 14217903 14217955 -236469899 - MLT1I LTR MaLR -141 268 214 2222 181 37 22 chr2 14217955 14218413 -236469441 + MLT1C LTR MaLR 3 467 0 278 221 79 142 chr2 14218413 14218550 -236469304 - MLT1I LTR MaLR -195 214 91 21 0 0 0 chr2 14218922 14218943 -236468911 + AT_rich Low_complexity Low_complexity 1 21 0 600 162 18 9 chr2 14219303 14219414 -236468440 + MER81 DNA DNA 1 112 -2 371 252 37 0 chr2 14219515 14219622 -236468232 + MER81 DNA DNA 1 111 -3 569 216 40 8 chr2 14219636 14219761 -236468093 - MIR SINE MIR -63 145 17 229 387 0 9 chr2 14220227 14220338 -236467516 + MIR SINE MIR 33 142 -66 231 331 39 45 chr2 14220447 14220601 -236467253 + MIR SINE MIR 26 178 -84 195 42 0 0 chr2 14220808 14220832 -236467022 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 30 0 0 0 chr2 14220888 14220918 -236466936 + AT_rich Low_complexity Low_complexity 1 30 0 455 274 77 69 chr2 14220954 14221228 -236466626 - MLT1J LTR MaLR 0 511 236 265 254 30 0 chr2 14221552 14221619 -236466235 - MLT1L LTR MaLR -546 69 1 22 35 0 0 chr2 14221900 14221929 -236465925 + AT_rich Low_complexity Low_complexity 1 29 0 21 89 0 0 chr2 14222083 14222139 -236465715 + AT_rich Low_complexity Low_complexity 1 56 0 248 240 150 10 chr2 14223615 14223715 -236464139 - MIR SINE MIR -73 189 76 1466 66 0 0 chr2 14223767 14223981 -236463873 + L1PA8 LINE L1 5966 6179 0 1558 333 107 17 chr2 14224859 14225824 -236462030 + L2 LINE L2 417 1468 -1846 2192 162 38 23 chr2 14226013 14226052 -236461802 - MLT2A2 LTR ERVL 0 554 517 495 0 0 0 chr2 14226052 14226107 -236461747 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 2192 162 38 23 chr2 14226107 14226602 -236461252 - MLT2A2 LTR ERVL -37 517 1 1937 327 85 75 chr2 14226603 14227852 -236460002 + L2 LINE L2 1527 2788 -526 1919 145 0 0 chr2 14228369 14228699 -236459155 + AluSx SINE Alu 1 330 0 242 318 16 0 chr2 14228838 14228901 -236458953 + L2 LINE L2 3123 3186 -86 2367 227 39 6 chr2 14229901 14230417 -236457437 - MER87 LTR ERV1 -6 535 3 381 22 0 0 chr2 14230488 14230534 -236457320 + (CA)n Simple_repeat Simple_repeat 2 47 0 461 328 4 43 chr2 14230775 14231007 -236456847 - L1MEc LINE L1 -5676 720 498 656 285 8 42 chr2 14231142 14231402 -236456452 - L1MEc LINE L1 -6090 306 56 213 361 12 0 chr2 14232047 14232130 -236455724 - MIR SINE MIR -74 134 51 348 340 52 36 chr2 14232616 14232810 -236455044 + L3 LINE CR1 1247 1443 -134 6144 29 4 1 chr2 14233006 14233739 -236454115 + L1PA4 LINE L1 5417 6151 -4 22 0 0 0 chr2 14233959 14233981 -236453873 + AT_rich Low_complexity Low_complexity 1 22 0 6855 69 159 28 chr2 14234741 14235860 -236451994 - MER11A LTR ERVK 0 1266 1 190 377 149 11 chr2 14237285 14237460 -236450394 + L2 LINE L2 2958 3156 -116 190 200 36 73 chr2 14237516 14237571 -236450283 - L2 LINE L2 -1 3271 3219 * 341 339 35 9 chr2 14237562 14237677 -236450177 + L2 LINE L2 3151 3268 -4 309 51 0 0 chr2 14238251 14238290 -236449564 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr2 14238420 14238455 -236449399 + AT_rich Low_complexity Low_complexity 1 35 0 303 44 0 0 chr2 14238948 14238993 -236448861 + L1PA3 LINE L1 6111 6155 0 1743 198 83 30 chr2 14239695 14240155 -236447699 - MLT1D LTR MaLR 0 505 22 530 298 192 0 chr2 14240223 14240431 -236447423 - MIR SINE MIR -2 260 13 309 26 0 0 chr2 14241315 14241353 -236446501 + (CA)n Simple_repeat Simple_repeat 2 39 0 230 239 194 0 chr2 14241523 14241590 -236446264 + MIR SINE MIR 36 115 -93 228 333 21 43 chr2 14241714 14241807 -236446047 + L2 LINE L2 3181 3271 -1 2179 169 48 0 chr2 14242443 14242821 -236445033 + MSTD LTR MaLR 1 396 0 497 263 50 53 chr2 14243173 14243435 -236444419 + MIR SINE MIR 2 262 0 22 0 0 0 chr2 14243569 14243591 -236444263 + AT_rich Low_complexity Low_complexity 1 22 0 198 350 150 0 chr2 14244221 14244301 -236443553 - L2 LINE L2 -47 3225 3134 936 209 121 85 chr2 14244390 14244777 -236443077 - MER57A LTR ERV1 0 403 3 348 286 157 31 chr2 14244853 14245108 -236442746 - L2 LINE L2 -337 2977 2691 402 325 32 0 chr2 14245443 14245597 -236442257 + MIR SINE MIR 101 259 -3 603 329 76 4 chr2 14245660 14245897 -236441957 - MIR SINE MIR -5 257 4 219 227 76 15 chr2 14245897 14245962 -236441892 + MIR SINE MIR 63 131 -77 286 296 56 24 chr2 14245962 14246087 -236441767 + MLT1J2 LTR MaLR 32 160 -290 989 284 30 62 chr2 14246266 14246868 -236440986 + HsTC2a DNA Tc2 1 583 -161 1017 304 61 39 chr2 14246868 14247512 -236440342 + L1ME LINE L1 5 662 -5408 192 288 17 17 chr2 14247553 14247612 -236440242 + MIR SINE MIR 76 134 -128 25 0 0 0 chr2 14247616 14247641 -236440213 + AT_rich Low_complexity Low_complexity 1 25 0 216 310 69 88 chr2 14248254 14248470 -236439384 + MIR SINE MIR 1 212 -50 204 125 0 0 chr2 14248885 14248917 -236438937 + (T)n Simple_repeat Simple_repeat 1 32 0 1490 213 89 9 chr2 14249533 14249961 -236437893 - MLT1C LTR MaLR 0 467 6 397 248 88 22 chr2 14250730 14250867 -236436987 - MIR SINE MIR 0 262 117 289 217 0 17 chr2 14251055 14251115 -236436739 + MIR SINE MIR 95 153 -109 336 347 60 40 chr2 14251672 14251822 -236436032 - MIR3 SINE MIR -11 197 45 823 198 89 10 chr2 14251858 14252060 -236435794 - MER20 DNA MER1_type 0 219 2 400 301 38 107 chr2 14252355 14252644 -236435210 + L2 LINE L2 2996 3264 -8 2018 161 46 10 chr2 14252685 14253228 -236434626 - L1M2 LINE L1 -743 5403 4971 3652 127 37 97 chr2 14253245 14253364 -236434490 + L1MA6 LINE L1 5536 5661 -639 2456 86 0 6 chr2 14253364 14253677 -236434177 + AluY SINE Alu 1 311 0 3652 127 37 97 chr2 14253677 14253893 -236433961 + L1MA6 LINE L1 5661 5888 -412 275 143 20 0 chr2 14253893 14253977 -236433877 - AluS SINE Alu 0 315 231 3652 127 37 97 chr2 14253977 14254405 -236433449 + L1MA6 LINE L1 5888 6300 0 1252 145 208 25 chr2 14254933 14255195 -236432659 + AluSx SINE Alu 1 306 0 187 311 202 25 chr2 14257327 14257446 -236430408 - MIR SINE MIR -102 160 21 219 386 90 7 chr2 14258214 14258359 -236429495 - L2 LINE L2 -333 2980 2824 1061 221 28 0 chr2 14259216 14259433 -236428421 - MER58A DNA MER1_type 0 224 2 375 295 48 42 chr2 14260030 14260196 -236427658 + MIR SINE MIR 68 234 -28 225 298 116 25 chr2 14260630 14260751 -236427103 + MIR3 SINE MIR 38 169 -39 522 284 96 23 chr2 14261067 14261285 -236426569 + MIR SINE MIR 25 258 -4 199 314 29 29 chr2 14261777 14261847 -236426007 - L2 LINE L2 -3 3269 3200 1870 124 56 25 chr2 14262040 14262395 -236425459 + THE1C LTR MaLR 10 375 0 286 377 27 0 chr2 14263234 14263380 -236424474 + L3 LINE CR1 1236 1385 -192 213 154 0 0 chr2 14263687 14263726 -236424128 + CT-rich Low_complexity Low_complexity 2 40 0 339 113 0 0 chr2 14263726 14263779 -236424075 + (CA)n Simple_repeat Simple_repeat 1 53 0 2055 131 0 13 chr2 14263942 14264247 -236423607 + AluSx SINE Alu 1 301 -11 510 197 15 36 chr2 14264686 14264823 -236423031 + LTR45 LTR ERV1 391 524 -1 257 291 241 25 chr2 14264943 14265146 -236422708 - MIR SINE MIR -14 248 2 24 32 0 0 chr2 14265626 14265657 -236422197 + AT_rich Low_complexity Low_complexity 1 31 0 213 355 120 22 chr2 14265927 14266110 -236421744 + MIR SINE MIR 49 249 -13 723 260 57 16 chr2 14266228 14266420 -236421434 - MIR SINE MIR -44 218 19 942 222 23 36 chr2 14266447 14266668 -236421186 + MER20 DNA MER1_type 1 218 -1 312 342 46 46 chr2 14267163 14267315 -236420539 - MIR3 SINE MIR -49 159 8 494 266 72 22 chr2 14268618 14268757 -236419097 - MIR3 SINE MIR -49 159 14 371 60 0 0 chr2 14269076 14269126 -236418728 - L1PA6 LINE L1 -7 6147 6098 1803 197 36 23 chr2 14269732 14270123 -236417731 - MSTD LTR MaLR 0 396 1 338 331 35 55 chr2 14270204 14270349 -236417505 + MIR SINE MIR 15 156 -52 1840 174 83 25 chr2 14271446 14271854 -236416000 + MSTB1 LTR MaLR 1 432 0 244 250 48 77 chr2 14272218 14272322 -236415532 - L2 LINE L2 0 3313 3213 282 347 8 0 chr2 14272926 14273047 -236414807 + LTR16B LTR ERVL 4 125 -339 388 171 184 32 chr2 14273084 14273242 -236414612 + MER96B DNA MER1_type? 49 230 -187 640 296 81 3 chr2 14273247 14273544 -236414310 + LTR16B LTR ERVL 145 464 0 213 39 0 0 chr2 14273770 14273796 -236414058 + (TATG)n Simple_repeat Simple_repeat 2 27 0 490 315 91 14 chr2 14276954 14277173 -236410681 - MIR SINE MIR -7 255 20 2014 170 29 10 chr2 14277294 14277677 -236410177 - MLT1B LTR MaLR 0 390 1 305 205 28 159 chr2 14278352 14278635 -236409219 + MLT1J LTR MaLR 128 373 -138 2040 116 41 0 chr2 14278899 14279193 -236408661 + AluSc SINE Alu 1 306 -3 451 274 6 45 chr2 14279465 14279622 -236408232 - L2 LINE L2 -1 3312 3162 210 261 0 0 chr2 14279625 14279671 -236408183 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 201 239 128 83 chr2 14279728 14279837 -236408017 + MIR3 SINE MIR 92 205 -3 183 352 14 14 chr2 14280086 14280157 -236407697 + L2 LINE L2 3223 3293 -20 279 0 0 0 chr2 14280167 14280198 -236407656 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1272 241 65 6 chr2 14282133 14282485 -236405369 + MLT1C LTR MaLR 95 467 0 440 281 50 7 chr2 14283571 14283710 -236404144 + MIR SINE MIR 116 260 -2 197 176 0 20 chr2 14283728 14283779 -236404075 + GA-rich Low_complexity Low_complexity 1 50 0 2117 204 30 42 chr2 14284052 14284558 -236403296 + MLT1D LTR MaLR 3 502 -3 608 270 131 18 chr2 14285913 14286135 -236401719 + MIR SINE MIR 4 250 -12 279 285 114 32 chr2 14286137 14286260 -236401594 + MIR SINE MIR 34 140 -68 222 276 145 0 chr2 14287493 14287569 -236400285 - L2 LINE L2 -38 3234 3148 231 342 25 8 chr2 14287716 14287836 -236400018 - MLT1L LTR MaLR -2 613 492 477 0 0 0 chr2 14288070 14288123 -236399731 + (TGGA)n Simple_repeat Simple_repeat 4 56 0 246 284 168 0 chr2 14289041 14289136 -236398718 - MIR3 SINE MIR -12 196 86 391 293 5 7 chr2 14289619 14290308 -236397546 + (CA)n Simple_repeat Simple_repeat 1 687 0 540 322 0 0 chr2 14290359 14290874 -236396980 + (CA)n Simple_repeat Simple_repeat 1 515 0 530 282 0 6 chr2 14290899 14291080 -236396774 + (CA)n Simple_repeat Simple_repeat 1 180 0 435 247 121 24 chr2 14291551 14291717 -236396137 - MIR SINE MIR -13 249 68 1134 8 0 0 chr2 14291774 14291895 -236395959 - L1PA3 LINE L1 0 6155 6035 4451 16 0 0 chr2 14291895 14292390 -236395464 + L1PA3 LINE L1 5474 5968 -187 233 281 0 18 chr2 14292407 14292464 -236395390 - L2 LINE L2 -230 3042 2987 220 338 14 29 chr2 14292905 14293044 -236394810 + L2 LINE L2 2599 2735 -579 369 310 44 9 chr2 14294095 14294208 -236393646 - L2 LINE L2 -17 3296 3180 203 225 225 50 chr2 14294608 14294647 -236393207 - MIR SINE MIR -109 153 122 261 0 0 0 chr2 14294647 14294676 -236393178 + (GA)n Simple_repeat Simple_repeat 2 30 0 203 225 225 50 chr2 14294676 14294716 -236393138 - MIR SINE MIR -140 122 60 184 303 78 49 chr2 14294995 14295137 -236392717 + MIR SINE MIR 111 256 -6 214 290 43 14 chr2 14295161 14295230 -236392624 - MIR SINE MIR -68 140 70 311 299 0 0 chr2 14295620 14295687 -236392167 - L2 LINE L2 -16 3256 3190 180 384 60 20 chr2 14295690 14295841 -236392013 + L2 LINE L2 3092 3248 -24 439 280 60 33 chr2 14296100 14296282 -236391572 - MIR SINE MIR -29 233 47 654 243 161 23 chr2 14296486 14296704 -236391150 + MIR SINE MIR 4 251 -11 437 308 48 7 chr2 14296713 14296859 -236390995 - MIR SINE MIR -26 236 85 983 235 145 0 chr2 14297577 14297866 -236389988 - L1ME1 LINE L1 -1 6165 5835 208 300 138 23 chr2 14297868 14297998 -236389856 - MER5B DNA MER1_type 0 178 34 6522 158 38 0 chr2 14297998 14299250 -236388604 + L1MC1 LINE L1 5043 6331 -2 503 289 56 6 chr2 14299302 14299503 -236388351 - MIR SINE MIR -46 216 8 1426 134 0 18 chr2 14300090 14300313 -236387541 - L1PB1 LINE L1 -191 5960 5742 1689 205 51 56 chr2 14300779 14301247 -236386607 - MLT1C LTR MaLR 0 467 2 363 291 27 9 chr2 14302133 14302243 -236385611 + L2 LINE L2 2677 2788 -526 438 200 50 0 chr2 14302464 14302544 -236385310 + MER96 DNA MER1_type? 1 84 -91 296 220 0 0 chr2 14302539 14302598 -236385256 - MER96 DNA MER1_type? -114 61 3 * 247 327 27 18 chr2 14302878 14302988 -236384866 - L2 LINE L2 -227 3045 2935 504 123 37 18 chr2 14303946 14304109 -236383745 + (TA)n Simple_repeat Simple_repeat 1 166 0 24 53 0 0 chr2 14304117 14304155 -236383699 + AT_rich Low_complexity Low_complexity 1 38 0 296 157 52 179 chr2 14304215 14304349 -236383505 - MER112 DNA MER1_type -7 253 137 288 0 0 0 chr2 14304379 14304411 -236383443 + (TG)n Simple_repeat Simple_repeat 1 32 0 348 317 84 18 chr2 14304519 14304686 -236383168 + MIR SINE MIR 20 197 -65 526 264 67 11 chr2 14304688 14304866 -236382988 + MIR SINE MIR 9 196 -66 214 233 128 83 chr2 14305566 14305699 -236382155 - MER5A DNA MER1_type -6 183 45 192 230 44 115 chr2 14305743 14305856 -236381998 + MIR SINE MIR 95 199 -63 441 216 193 0 chr2 14306945 14307097 -236380757 - MER5A DNA MER1_type 0 189 4 448 253 53 47 chr2 14307118 14307288 -236380566 + MER5B DNA MER1_type 1 171 -7 335 267 139 18 chr2 14307835 14308000 -236379854 + MIR3 SINE MIR 3 187 -21 471 245 41 24 chr2 14308151 14308354 -236379500 + MLT1J LTR MaLR 11 282 -331 2179 124 0 0 chr2 14308702 14309008 -236378846 + AluSx SINE Alu 1 306 -6 259 286 190 47 chr2 14310848 14311190 -236376664 + L2 LINE L2 2586 2976 -338 273 288 122 22 chr2 14311313 14311452 -236376402 + MIR SINE MIR 47 199 -63 1208 111 28 17 chr2 14311596 14311776 -236376078 - L1PA16 LINE L1 -5 6161 5980 250 378 25 34 chr2 14312323 14312442 -236375412 + L2 LINE L2 3150 3267 -5 180 374 55 22 chr2 14312548 14312639 -236375215 - MIR SINE MIR -133 129 36 265 330 9 0 chr2 14315393 14315508 -236372346 + (CATATA)n Simple_repeat Simple_repeat 2 117 0 27 0 0 0 chr2 14317137 14317164 -236370690 + AT_rich Low_complexity Low_complexity 1 27 0 199 313 67 15 chr2 14317214 14317348 -236370506 - L2 LINE L2 -1277 2037 1897 511 295 92 33 chr2 14317471 14317742 -236370112 - MLT1I LTR MaLR 0 409 123 181 356 114 23 chr2 14317811 14317943 -236369911 + L2 LINE L2 3117 3260 -12 209 294 174 22 chr2 14318244 14318336 -236369518 - MIR3 SINE MIR -8 200 95 21 0 0 0 chr2 14318568 14318589 -236369265 + AT_rich Low_complexity Low_complexity 1 21 0 395 290 26 52 chr2 14318911 14319066 -236368788 - MIR3 SINE MIR -49 159 9 248 296 82 0 chr2 14319640 14319738 -236368116 + MIR SINE MIR 47 152 -110 23 0 0 0 chr2 14320508 14320531 -236367323 + AT_rich Low_complexity Low_complexity 1 23 0 2181 112 0 0 chr2 14320531 14320816 -236367038 - AluSx SINE Alu -27 285 1 22 35 0 0 chr2 14321090 14321119 -236366735 + AT_rich Low_complexity Low_complexity 1 29 0 218 179 36 54 chr2 14321193 14321249 -236366605 - MIR3 SINE MIR -48 160 106 605 264 75 38 chr2 14321323 14321535 -236366319 - MIR SINE MIR -14 248 29 890 279 154 13 chr2 14322680 14323317 -236364537 + L2 LINE L2 2574 3313 0 234 278 100 0 chr2 14323550 14323640 -236364214 + MIR SINE MIR 76 174 -88 207 271 0 17 chr2 14324359 14324418 -236363436 + GA-rich Low_complexity Low_complexity 3 60 0 6011 108 2 1 chr2 14325717 14326569 -236361285 + L1PA13 LINE L1 5310 6162 -1 3347 31 5 8 chr2 14326767 14327154 -236360700 - L1PA3 LINE L1 -5 6150 5765 36922 38 2 2 chr2 14327254 14333193 -236354661 - L1PA3 LINE L1 -218 5937 9 294 326 152 30 chr2 14333472 14333604 -236354250 + L2 LINE L2 3125 3272 0 399 272 253 20 chr2 14333708 14333910 -236353944 - MIR SINE MIR -11 251 3 401 277 35 21 chr2 14333911 14334052 -236353802 + MIR3 SINE MIR 61 203 -5 2089 106 0 88 chr2 14334365 14334559 -236353295 - AluSp SINE Alu -11 302 147 2375 100 3 0 chr2 14334559 14334870 -236352984 - AluSp SINE Alu -1 312 1 2089 106 0 88 chr2 14334870 14335006 -236352848 - AluSp SINE Alu -166 147 1 1977 131 0 7 chr2 14335237 14335560 -236352294 + AluSg SINE Alu 1 321 0 376 230 0 0 chr2 14335609 14335683 -236352171 + L1MDb LINE L1 481 554 -5855 761 206 5 42 chr2 14335733 14335922 -236351932 + L1MDb LINE L1 653 834 -5575 1731 229 32 8 chr2 14335928 14336330 -236351524 - MER47B DNA MER2_type 0 418 7 1020 148 0 51 chr2 14336369 14336585 -236351269 + L1MDb LINE L1 871 1075 -5334 1067 188 54 122 chr2 14336585 14337003 -236350851 + MLT1B LTR MaLR 1 457 0 1892 234 95 33 chr2 14337003 14337831 -236350023 + L1MDb LINE L1 1048 1927 -4479 310 164 327 9 chr2 14337908 14338018 -236349836 + MER4C LTR ERV1 302 446 -19 22 0 0 0 chr2 14339516 14339538 -236348316 + AT_rich Low_complexity Low_complexity 1 22 0 311 282 145 0 chr2 14340637 14340754 -236347100 + MIR SINE MIR 64 197 -65 1586 287 66 43 chr2 14340991 14341851 -236346003 + L1MC4 LINE L1 7160 8039 -3 235 293 0 0 chr2 14341855 14341913 -236345941 - MIR3 SINE MIR -27 181 124 8276 35 3 0 chr2 14342190 14343247 -236344607 - L1P LINE L1 -3504 2642 1583 24 32 0 0 chr2 14343646 14343677 -236344177 + AT_rich Low_complexity Low_complexity 1 31 0 2962 221 66 48 chr2 14343681 14344731 -236343123 - L1ME1 LINE L1 -5 6230 5128 685 198 8 143 chr2 14344731 14344983 -236342871 - MER20 DNA MER1_type -1 218 1 2962 221 66 48 chr2 14344983 14345672 -236342182 - L1ME1 LINE L1 -1107 5128 4453 914 238 135 76 chr2 14345672 14345950 -236341904 + LTR28 LTR ERV1 1 261 -1494 1616 58 4 86 chr2 14345950 14346207 -236341647 + AluY SINE Alu 73 308 -3 914 238 135 76 chr2 14346207 14346948 -236340906 + LTR28 LTR ERV1 261 1742 -13 4557 265 52 25 chr2 14346964 14349266 -236338588 - L1ME1 LINE L1 -1767 4448 2091 1846 121 91 26 chr2 14349266 14349605 -236338249 + THE1B LTR MaLR 2 362 -2 4557 265 52 25 chr2 14349605 14350144 -236337710 - L1ME1 LINE L1 -4124 2091 1568 219 88 0 0 chr2 14350297 14350331 -236337523 + (GTTTG)n Simple_repeat Simple_repeat 5 38 0 1057 227 122 29 chr2 14350334 14350890 -236336964 - L1ME1 LINE L1 -5096 1300 693 * 5896 25 0 1 chr2 14350885 14351629 -236336225 - L1P LINE L1 -770 5376 4634 4471 14 4 0 chr2 14351629 14352137 -236335717 + L1PA2 LINE L1 5642 6155 0 1698 266 65 21 chr2 14352149 14352710 -236335144 - L1ME1 LINE L1 -5693 703 110 2207 117 0 7 chr2 14352710 14353034 -236334820 - AluSx SINE Alu 0 312 1 1698 266 65 21 chr2 14353034 14353099 -236334755 - L1ME1 LINE L1 -6286 110 49 2824 220 27 10 chr2 14353132 14353758 -236334096 - MER82 DNA MER2_type -15 638 2 300 310 54 16 chr2 14354092 14354221 -236333633 - L2 LINE L2 -1 3271 3138 328 304 30 129 chr2 14354381 14354746 -236333108 - L2 LINE L2 -411 2903 2575 214 354 97 65 chr2 14354775 14355083 -236332771 + L2 LINE L2 2869 3186 -86 999 140 43 38 chr2 14355132 14355318 -236332536 - MER5A DNA MER1_type 0 189 3 207 255 0 0 chr2 14355400 14355447 -236332407 + (TG)n Simple_repeat Simple_repeat 2 48 0 381 22 0 0 chr2 14356525 14356571 -236331283 + (TG)n Simple_repeat Simple_repeat 2 47 0 198 338 189 25 chr2 14356778 14356979 -236330875 + MIR SINE MIR 9 242 -20 180 77 0 0 chr2 14356987 14357013 -236330841 + (TC)n Simple_repeat Simple_repeat 1 26 0 342 227 91 65 chr2 14357216 14357370 -236330484 - MIR SINE MIR -71 191 34 2077 111 88 20 chr2 14357426 14357767 -236330087 + THE1B LTR MaLR 1 364 0 9452 112 14 10 chr2 14357767 14359244 -236328610 + THE1B-int LTR MaLR 1 1483 -97 407 110 0 24 chr2 14359344 14359426 -236328428 + THE1B-int LTR MaLR 1499 1578 -2 2216 106 66 23 chr2 14359428 14359777 -236328077 + THE1B LTR MaLR 1 364 0 392 285 124 27 chr2 14359781 14359967 -236327887 + MIR SINE MIR 46 249 -13 1832 177 0 7 chr2 14360300 14360599 -236327255 + AluJo SINE Alu 1 297 -15 743 253 109 30 chr2 14360625 14360827 -236327027 + MER20 DNA MER1_type 1 218 -1 190 333 8 34 chr2 14360852 14360969 -236326885 - L2 LINE L2 -649 2665 2552 377 310 58 35 chr2 14361269 14361440 -236326414 - MLT1G1 LTR MaLR -206 389 215 2097 127 116 10 chr2 14361963 14362350 -236325504 + MSTA LTR MaLR 1 428 0 8109 151 26 52 chr2 14362352 14363967 -236323887 + MSTA-int LTR MaLR 3 1575 -5 1942 176 99 8 chr2 14363969 14364361 -236323493 + MSTA LTR MaLR 1 428 0 587 323 126 39 chr2 14364723 14365333 -236322521 + L2 LINE L2 2137 2799 -515 2205 147 12 0 chr2 14365333 14365666 -236322188 + MER1B DNA MER1_type 1 337 0 248 376 50 21 chr2 14366590 14366731 -236321123 + L2 LINE L2 3123 3267 -5 351 378 11 32 chr2 14366976 14367164 -236320690 + MIR3 SINE MIR 18 201 -7 389 322 72 5 chr2 14367539 14367724 -236320130 - MIR SINE MIR -56 206 6 757 282 30 71 chr2 14368042 14368407 -236319447 + L2 LINE L2 2918 3267 -5 5968 102 4 5 chr2 14368839 14369847 -236318007 + L1MA1 LINE L1 5146 6152 -150 2371 65 16 0 chr2 14370091 14370397 -236317457 - AluY SINE Alu 0 311 1 2060 110 0 69 chr2 14370903 14371222 -236316632 + AluSg SINE Alu 1 297 -13 205 235 47 82 chr2 14371730 14371815 -236316039 - MIR3 SINE MIR -43 165 84 226 324 42 0 chr2 14372142 14372213 -236315641 - MIR SINE MIR -188 74 1 354 324 14 40 chr2 14372579 14372727 -236315127 - MIR3 SINE MIR -23 185 42 288 328 41 33 chr2 14373286 14373408 -236314446 - MIR SINE MIR -116 146 24 433 262 200 0 chr2 14373697 14373842 -236314012 + MER5A DNA MER1_type 6 179 -10 285 371 56 64 chr2 14374743 14375120 -236312734 - L2 LINE L2 0 3272 2899 382 156 2 39 chr2 14375204 14375299 -236312555 + MLT1F1 LTR MaLR 465 567 0 * 449 185 44 67 chr2 14375299 14375433 -236312421 + MER69 DNA AcHobo 15 145 -2381 410 160 11 0 chr2 14375432 14375526 -236312328 + MER69 DNA AcHobo 2336 2430 -96 * 439 169 0 0 chr2 14376627 14376704 -236311150 - L1MB1 LINE L1 -609 5725 5649 2181 166 48 0 chr2 14376708 14377124 -236310730 + L1MB1 LINE L1 5733 6168 0 864 310 71 33 chr2 14377227 14378025 -236309829 - L2 LINE L2 0 3313 2438 254 333 13 0 chr2 14379020 14379098 -236308756 + MER5B DNA MER1_type 3 81 -97 420 272 116 87 chr2 14379104 14379656 -236308198 - MLT1L LTR MaLR -7 608 41 216 254 52 155 chr2 14379867 14379998 -236307856 - MER91A DNA MER1_type -22 174 68 798 233 111 0 chr2 14379998 14380187 -236307667 + MER63A DNA MER1_type 1 210 0 216 254 52 155 chr2 14380187 14380248 -236307606 - MER91A DNA MER1_type -128 68 2 21 0 0 0 chr2 14380522 14380543 -236307311 + AT_rich Low_complexity Low_complexity 1 21 0 495 400 4 16 chr2 14380809 14381064 -236306790 + MIR SINE MIR 3 254 -8 259 182 26 26 chr2 14381436 14381513 -236306341 + (TTTG)n Simple_repeat Simple_repeat 2 78 0 463 197 76 4 chr2 14381923 14382085 -236305769 - MER20 DNA MER1_type -1 218 1 289 314 76 0 chr2 14382091 14382196 -236305658 - MIR SINE MIR -84 178 66 306 229 144 78 chr2 14382551 14382704 -236305150 + MIR SINE MIR 87 249 -13 474 298 62 31 chr2 14382860 14383021 -236304833 + MIR3 SINE MIR 19 184 -24 13023 23 9 1 chr2 14384356 14385987 -236301867 + L1PA2 LINE L1 3402 5044 -1102 4197 13 0 0 chr2 14386087 14386561 -236301293 + L1PA2 LINE L1 5675 6148 -7 913 188 35 23 chr2 14386571 14386832 -236301022 + L1M1 LINE L1 2897 3160 -2986 * 11259 179 32 60 chr2 14386829 14388552 -236299302 + L1MA3 LINE L1 10 1638 -5927 222 37 0 0 chr2 14388552 14388579 -236299275 + (GA)n Simple_repeat Simple_repeat 2 28 0 11259 179 32 60 chr2 14388579 14389456 -236298398 + L1MA3 LINE L1 1638 2538 -5027 6297 143 22 12 chr2 14389446 14391580 -236296274 + L1MA3 LINE L1 5575 7724 0 * 5235 158 34 23 chr2 14391564 14392832 -236295022 + L1M1 LINE L1 4250 5540 -743 * 736 217 12 37 chr2 14392940 14393100 -236294754 + MIR SINE MIR 42 198 -64 1966 185 6 0 chr2 14393100 14393446 -236294408 - MER7A DNA MER2_type 0 346 1 736 217 12 37 chr2 14393446 14393484 -236294370 + MIR SINE MIR 198 235 -27 228 67 0 0 chr2 14393899 14393929 -236293925 + (A)n Simple_repeat Simple_repeat 1 30 0 255 160 40 0 chr2 14394320 14394370 -236293484 - L2 LINE L2 0 3313 3262 395 383 32 34 chr2 14394573 14394983 -236292871 - L2 LINE L2 -353 2961 2553 2299 198 42 14 chr2 14395027 14395105 -236292749 - LTR53 LTR ERVL 0 519 445 2089 108 68 34 chr2 14395105 14395457 -236292397 - THE1B LTR MaLR 0 364 1 2299 198 42 14 chr2 14395457 14395877 -236291977 - LTR53 LTR ERVL -74 445 7 295 162 15 29 chr2 14396171 14396239 -236291615 + MLT1H LTR MaLR 483 549 0 3114 184 4 25 chr2 14396460 14397145 -236290709 + L1MA4 LINE L1 5629 6299 -1 2002 113 73 0 chr2 14398286 14398560 -236289294 - AluSg SINE Alu -16 294 1 455 303 45 86 chr2 14398607 14398851 -236289003 + MIR SINE MIR 23 256 -6 515 269 42 12 chr2 14398866 14399033 -236288821 - MLT1J2 LTR MaLR -2 448 277 1303 196 53 94 chr2 14399364 14399833 -236288021 - LTR7 LTR ERV1 0 450 1 282 299 38 87 chr2 14399888 14400072 -236287782 - MIR3 SINE MIR -12 196 22 2330 109 0 13 chr2 14400180 14400493 -236287361 + AluSg SINE Alu 1 309 -1 309 275 50 55 chr2 14400605 14400787 -236287067 + MIR SINE MIR 53 233 -29 872 278 25 16 chr2 14400801 14401046 -236286808 + MIR SINE MIR 16 262 0 272 256 0 45 chr2 14401252 14401334 -236286520 + MIR SINE MIR 73 150 -58 220 270 157 82 chr2 14401921 14401953 -236285901 - MIR SINE MIR -72 190 162 186 43 0 0 chr2 14401953 14401976 -236285878 + (TTA)n Simple_repeat Simple_repeat 2 24 0 220 270 157 82 chr2 14401976 14402102 -236285752 - MIR SINE MIR -100 162 20 205 382 44 22 chr2 14402663 14402799 -236285055 - MIR3 SINE MIR -63 145 7 390 346 47 16 chr2 14404184 14404385 -236283469 - MIR SINE MIR -14 248 4 484 312 40 24 chr2 14405395 14405642 -236282212 + LTR16C LTR ERVL 146 396 -95 2139 271 42 54 chr2 14406093 14407381 -236280473 + L1MEc LINE L1 18 1289 -5107 464 298 24 0 chr2 14407495 14407700 -236280154 + L1MEc LINE L1 1623 1832 -4564 1076 228 118 56 chr2 14407719 14408565 -236279289 + L1MEc LINE L1 1869 2761 -3454 323 97 0 9 chr2 14408577 14408643 -236279211 - AluSg/x SINE Alu -77 225 176 713 143 29 58 chr2 14408643 14408809 -236279045 - LTR12 LTR ERV1 -108 606 379 3835 121 56 44 chr2 14408810 14409486 -236278368 - LTR12 LTR ERV1 -4 684 1 277 171 0 0 chr2 14409488 14409529 -236278325 - AluSg/x SINE Alu -128 172 132 752 170 0 15 chr2 14409529 14409664 -236278190 - AluJo/FLAM SINE Alu -169 133 1 1445 238 165 66 chr2 14409664 14410492 -236277362 + L1MEc LINE L1 2745 3489 -2726 2359 69 0 50 chr2 14410492 14410810 -236277044 + AluY SINE Alu 1 302 -9 1445 238 165 66 chr2 14410810 14411468 -236276386 + L1MEc LINE L1 3489 4379 -1836 2103 113 10 3 chr2 14411487 14411779 -236276075 + AluSg SINE Alu 1 294 -16 24 0 0 0 chr2 14411809 14411833 -236276021 + AT_rich Low_complexity Low_complexity 1 24 0 1515 279 64 61 chr2 14411884 14412708 -236275146 - HERV16 LTR ERVL -2318 2678 1852 2377 325 98 14 chr2 14412925 14414330 -236273524 - HERV16 LTR ERVL -3471 1525 2 707 331 43 12 chr2 14414330 14414729 -236273125 - LTR16A LTR ERVL -18 432 22 452 128 73 64 chr2 14414770 14414879 -236272975 - L1MC1 LINE L1 0 6333 6224 3140 151 13 4 chr2 14414987 14415542 -236272312 - L1MC1 LINE L1 -100 6233 5674 334 296 105 71 chr2 14416884 14417316 -236270538 + HAL1b LINE L1 49 506 -842 2141 180 6 53 chr2 14417316 14417788 -236270066 + L1PA16 LINE L1 5716 6165 -1 334 296 105 71 chr2 14417788 14417906 -236269948 + HAL1b LINE L1 506 618 -730 944 205 83 5 chr2 14417907 14418112 -236269742 + MER58A DNA MER1_type 3 223 -1 203 304 0 0 chr2 14419828 14419874 -236267980 + MIR SINE MIR 31 76 -132 1479 170 38 42 chr2 14419962 14420264 -236267590 + AluJb SINE Alu 19 319 0 2036 297 123 27 chr2 14420834 14422306 -236265548 - L2 LINE L2 0 3313 1716 213 342 145 38 chr2 14422443 14422835 -236265019 + L2 LINE L2 2804 3237 -35 2205 112 14 0 chr2 14423377 14423671 -236264183 + AluSx SINE Alu 1 298 -14 2183 116 0 0 chr2 14424460 14424768 -236263086 - AluSx SINE Alu 0 308 1 422 214 22 0 chr2 14424972 14425061 -236262793 - ORSL DNA AcHobo -184 91 1 186 357 67 0 chr2 14426029 14426126 -236261728 + MIR3 SINE MIR 51 154 -54 2137 116 0 23 chr2 14426873 14427201 -236260653 + AluSq SINE Alu 1 313 0 317 324 76 30 chr2 14427841 14428070 -236259784 - MIR SINE MIR -13 249 10 208 295 90 66 chr2 14428236 14428358 -236259496 + MIR SINE MIR 19 143 -65 700 310 60 62 chr2 14429180 14429709 -236258145 - L1 LINE L1 -2216 3930 3403 692 253 87 33 chr2 14429751 14430083 -236257771 - L1 LINE L1 -2835 3311 2962 421 360 7 7 chr2 14430120 14430273 -236257581 + LTR33 LTR ERVL 28 180 -341 508 219 171 6 chr2 14430387 14430551 -236257303 + LTR33 LTR ERVL 331 521 0 1613 239 67 82 chr2 14430684 14431332 -236256522 + HAL1 LINE L1 1639 2272 -235 2236 95 7 3 chr2 14431332 14431627 -236256227 + AluSc SINE Alu 1 296 -13 1613 239 67 82 chr2 14431627 14431855 -236255999 + HAL1 LINE L1 2272 2502 -5 475 193 129 12 chr2 14431869 14432012 -236255842 + L1PB4 LINE L1 5028 5196 -950 2373 63 0 31 chr2 14432012 14432329 -236255525 + AluY SINE Alu 1 307 -4 475 193 129 12 chr2 14432329 14432356 -236255498 + L1PB4 LINE L1 5196 5218 -928 * 854 247 5 5 chr2 14432344 14432567 -236255287 + L1PB4 LINE L1 5934 6156 0 497 228 15 44 chr2 14433631 14433767 -236254087 - MIR SINE MIR -61 147 16 249 324 104 39 chr2 14434712 14434894 -236252960 + MIR SINE MIR 32 225 -37 1920 147 8 62 chr2 14435159 14435527 -236252327 + THE1A LTR MaLR 1 348 -7 542 257 96 38 chr2 14435617 14435917 -236251937 - MLT1H1 LTR MaLR -129 420 63 193 245 19 38 chr2 14437763 14437816 -236250038 + L2 LINE L2 3188 3239 -33 * 292 225 0 28 chr2 14437812 14437883 -236249971 - MIR SINE MIR 0 262 194 2012 153 0 0 chr2 14438795 14439096 -236248758 - AluSx SINE Alu -11 301 1 1070 217 18 32 chr2 14440265 14440635 -236247219 - MLT2B3 LTR ERVL 0 554 193 196 295 39 26 chr2 14440823 14440901 -236246953 - MIR SINE MIR -17 245 167 2404 58 7 0 chr2 14440901 14441192 -236246662 + AluY SINE Alu 1 293 -18 977 173 40 4 chr2 14441212 14441410 -236246444 - MLT2B3 LTR ERVL -320 200 2 225 184 0 0 chr2 14441439 14441477 -236246377 + L2 LINE L2 3235 3272 0 226 317 73 0 chr2 14442130 14442212 -236245642 + L2 LINE L2 3159 3246 -26 360 218 0 0 chr2 14442223 14442310 -236245544 + (CAG)n Simple_repeat Simple_repeat 2 88 0 395 231 109 101 chr2 14442322 14442560 -236245294 - MIR SINE MIR -3 259 20 221 308 243 0 chr2 14443932 14444039 -236243815 + MIR3 SINE MIR 30 162 -46 617 210 32 0 chr2 14444074 14444198 -236243656 + MER5A DNA MER1_type 1 128 -61 2409 78 7 0 chr2 14444211 14444518 -236243336 + AluY SINE Alu 1 309 -2 195 274 0 0 chr2 14444970 14445021 -236242833 - L3 LINE CR1 -3 1574 1524 * 419 319 42 18 chr2 14445012 14445178 -236242676 - MER5B DNA MER1_type -7 171 2 2351 62 41 0 chr2 14445178 14445469 -236242385 + AluY SINE Alu 1 303 -8 207 0 0 0 chr2 14445494 14445517 -236242337 + (A)n Simple_repeat Simple_repeat 1 23 0 207 291 76 13 chr2 14446377 14446456 -236241398 - MIR SINE MIR -131 131 48 181 286 130 13 chr2 14446470 14446547 -236241307 + MIR3 SINE MIR 112 197 -11 247 307 229 7 chr2 14447626 14447779 -236240075 + MIR SINE MIR 2 188 -74 472 164 0 14 chr2 14448002 14448075 -236239779 - AluS SINE Alu -237 73 2 1298 136 9 33 chr2 14448076 14448289 -236239565 + THE1B LTR MaLR 157 364 0 203 269 103 0 chr2 14448289 14448367 -236239487 + MIR SINE MIR 104 189 -73 380 318 20 26 chr2 14448386 14448537 -236239317 + MIR3 SINE MIR 48 197 -11 2106 242 115 13 chr2 14449290 14449828 -236238026 - MLT1E LTR MaLR 0 593 1 284 299 134 0 chr2 14450415 14450512 -236237342 - L2 LINE L2 -1 3312 3203 321 356 29 11 chr2 14450876 14451050 -236236804 - L2 LINE L2 -541 2773 2597 11851 132 13 8 chr2 14451371 14453187 -236234667 - Tigger1 DNA MER2_type -7 2411 586 3379 141 28 6 chr2 14453474 14454012 -236233842 - Tigger1 DNA MER2_type -1797 621 72 266 338 0 0 chr2 14454749 14454817 -236233037 + MIR3 SINE MIR 93 160 -48 786 265 37 0 chr2 14454904 14455093 -236232761 - MLT1B LTR MaLR -7 383 188 1037 118 59 18 chr2 14455234 14455403 -236232451 - MLT1B LTR MaLR -214 176 1 2416 77 0 0 chr2 14455539 14455836 -236232018 + AluY SINE Alu 1 297 -14 245 155 17 0 chr2 14455838 14455896 -236231958 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 302 368 32 0 chr2 14456112 14456237 -236231617 - L2 LINE L2 -2 3270 3142 347 329 46 46 chr2 14458787 14459024 -236228830 - L2 LINE L2 -836 2478 2242 1448 283 129 51 chr2 14459044 14460976 -236226878 - L1ME3 LINE L1 -15 6950 4849 537 316 59 7 chr2 14461085 14461373 -236226481 - L1ME3 LINE L1 -2426 4515 4213 355 272 56 56 chr2 14461462 14461730 -236226124 - L1ME3 LINE L1 -4546 2576 2309 516 287 127 61 chr2 14461748 14462206 -236225648 - L1ME3 LINE L1 -4866 2065 1632 253 187 116 116 chr2 14462208 14462363 -236225491 - L1ME3 LINE L1 -4962 1461 1307 8974 201 26 16 chr2 14462766 14467199 -236220655 + L1M3f LINE L1 3 4476 -1852 * 21393 160 31 15 chr2 14467198 14467275 -236220579 + L1M1 LINE L1 15 89 -7476 249 57 0 0 chr2 14467275 14467310 -236220544 + (CA)n Simple_repeat Simple_repeat 2 36 0 21393 160 31 15 chr2 14467310 14470829 -236217025 + L1M1 LINE L1 89 3693 -3872 2441 92 0 0 chr2 14470829 14471133 -236216721 + AluY SINE Alu 1 304 -7 21393 160 31 15 chr2 14471133 14471792 -236216062 + L1M1 LINE L1 3693 4340 -3225 26268 42 42 3 chr2 14471792 14475066 -236212788 + L1P LINE L1 1 3399 -2747 389 335 57 5 chr2 14475469 14475663 -236212191 + MIR SINE MIR 27 230 -32 226 304 18 0 chr2 14475696 14475752 -236212102 - L2 LINE L2 -15 3257 3201 866 250 73 88 chr2 14475755 14475974 -236211880 + L1MC4a LINE L1 5380 5601 -2207 5610 87 3 30 chr2 14475974 14476733 -236211121 - L1PA10 LINE L1 -12 6156 5419 866 250 73 88 chr2 14476733 14477045 -236210809 + L1MC4a LINE L1 5601 5903 -1905 801 167 42 0 chr2 14477441 14477585 -236210269 - MLT1A1 LTR MaLR 0 365 216 198 103 0 0 chr2 14477632 14477661 -236210193 + (CTTG)n Simple_repeat Simple_repeat 4 32 0 805 115 0 20 chr2 14477662 14477810 -236210044 + (TTTC)n Simple_repeat Simple_repeat 3 147 0 1377 219 54 3 chr2 14477832 14478306 -236209548 - AluJb SINE Alu 0 489 1 669 233 7 0 chr2 14478312 14478458 -236209396 - MLT1A1 LTR MaLR -218 147 1 2847 242 119 104 chr2 14478470 14479803 -236208051 - MLT1A1-int LTR MaLR -14 1357 5 434 266 40 24 chr2 14480615 14480739 -236207115 - MIR3 SINE MIR -21 187 62 1070 121 153 11 chr2 14481075 14481265 -236206589 + MER20 DNA MER1_type 1 217 -2 207 260 135 21 chr2 14482194 14482290 -236205564 + MIR SINE MIR 30 136 -72 224 354 158 16 chr2 14482856 14482983 -236204871 - L2 LINE L2 0 3272 3128 516 316 146 29 chr2 14482991 14483512 -236204342 - L2 LINE L2 -42 3271 2694 237 333 145 31 chr2 14483597 14483756 -236204098 - MER5B DNA MER1_type -1 177 1 370 297 76 49 chr2 14483893 14484524 -236203330 + L1M4 LINE L1 3689 4325 -1821 524 264 69 86 chr2 14484617 14485094 -236202760 + L1M4 LINE L1 4398 4866 -1280 7633 181 24 8 chr2 14485312 14485493 -236202361 + L1P LINE L1 3740 3917 -2229 2906 9 0 0 chr2 14485493 14485810 -236202044 - AluYb8 SINE Alu -1 317 1 7633 181 24 8 chr2 14485810 14487190 -236200664 + L1P LINE L1 3917 5326 -820 238 160 0 60 chr2 14487464 14487514 -236200340 + MIR SINE MIR 126 172 -90 2306 89 0 0 chr2 14488271 14488578 -236199276 + AluSg SINE Alu 1 307 0 2496 103 6 0 chr2 14489107 14489456 -236198398 + L1PA8A LINE L1 5763 6113 -18 207 0 0 0 chr2 14489460 14489483 -236198371 + (TAA)n Simple_repeat Simple_repeat 2 24 0 204 363 25 6 chr2 14489644 14489747 -236198107 - MIR SINE MIR -87 121 19 21 57 0 0 chr2 14490443 14490478 -236197376 + AT_rich Low_complexity Low_complexity 1 35 0 232 306 82 20 chr2 14490929 14491076 -236196778 + L2 LINE L2 2907 3062 -210 232 353 53 30 chr2 14491174 14491307 -236196547 + L2 LINE L2 3118 3253 -19 367 362 14 14 chr2 14491635 14491773 -236196081 - L3 LINE CR1 -7 1570 1433 2075 208 70 25 chr2 14491798 14492356 -236195498 + MLT1E2 LTR MaLR 37 619 -7 546 275 114 0 chr2 14492360 14492553 -236195301 - L3 LINE CR1 -122 1455 1241 378 283 7 14 chr2 14492969 14493107 -236194747 + L1MEc LINE L1 44 180 -6216 375 376 5 9 chr2 14493192 14493402 -236194452 + L1MEc LINE L1 196 404 -5992 468 347 42 62 chr2 14493483 14493606 -236194248 + L1MEc LINE L1 543 667 -5729 1208 234 86 27 chr2 14493606 14494047 -236193807 + MLT1C LTR MaLR 1 467 0 468 347 42 62 chr2 14494047 14494326 -236193528 + L1MEc LINE L1 667 937 -5459 200 373 0 17 chr2 14494503 14494562 -236193292 + MIR SINE MIR 46 103 -159 241 164 104 45 chr2 14494687 14494754 -236193100 + MLT1K LTR MaLR 179 249 -339 364 213 13 0 chr2 14495685 14495760 -236192094 - MIR SINE MIR -69 139 64 180 214 0 89 chr2 14496265 14496321 -236191533 + L3 LINE CR1 1214 1264 -313 502 291 135 13 chr2 14496444 14496674 -236191180 - MIR SINE MIR 0 262 5 312 321 47 74 chr2 14497250 14497440 -236190414 + HAL1 LINE L1 370 554 -1953 1428 261 98 40 chr2 14497592 14498513 -236189341 + HAL1 LINE L1 738 1711 -796 313 289 120 67 chr2 14498601 14498826 -236189028 + MLT1J2 LTR MaLR 56 292 -158 681 304 106 37 chr2 14498965 14499455 -236188399 + MLT1H1 LTR MaLR 32 555 0 244 290 154 44 chr2 14499469 14499904 -236187950 + HAL1 LINE L1 1720 2202 -305 657 296 82 10 chr2 14500060 14500266 -236187588 + MIR SINE MIR 20 240 -22 316 361 42 0 chr2 14500465 14500584 -236187270 + MIR SINE MIR 121 244 -18 299 287 197 28 chr2 14500633 14500887 -236186967 + L3b LINE CR1 1165 1461 -122 184 299 0 15 chr2 14501104 14501171 -236186683 + L3b LINE CR1 1165 1230 -353 27 0 0 0 chr2 14503953 14503980 -236183874 + AT_rich Low_complexity Low_complexity 1 27 0 199 180 20 60 chr2 14504526 14504576 -236183278 - MIR3 SINE MIR -2 206 159 291 54 0 0 chr2 14506321 14506358 -236181496 + (TG)n Simple_repeat Simple_repeat 2 38 0 1733 93 0 24 chr2 14506376 14506624 -236181230 + AluSx SINE Alu 64 305 -7 278 312 113 30 chr2 14506764 14507101 -236180753 + L1ME4a LINE L1 5699 6063 -58 1990 118 0 36 chr2 14507168 14507472 -236180382 + AluSx SINE Alu 1 293 -19 690 181 8 15 chr2 14507668 14507801 -236180053 - FLAM_A SINE Alu -1 132 1 197 149 85 21 chr2 14508213 14508260 -236179594 - MIR SINE MIR -114 94 45 32 0 0 0 chr2 14508292 14508324 -236179530 + AT_rich Low_complexity Low_complexity 1 32 0 627 223 38 13 chr2 14508561 14508718 -236179136 + MER5B DNA MER1_type 4 164 -14 477 157 293 14 chr2 14508723 14508863 -236178991 + MER5A DNA MER1_type 11 189 0 337 281 74 8 chr2 14509432 14509553 -236178301 - MER94 DNA DNA -1 133 5 371 281 55 43 chr2 14510135 14510299 -236177555 - MIR SINE MIR -12 250 85 22 0 0 0 chr2 14510840 14510862 -236176992 + AT_rich Low_complexity Low_complexity 1 22 0 186 340 46 59 chr2 14510896 14511049 -236176805 - L2 LINE L2 -11 3261 3111 211 367 54 34 chr2 14511102 14511249 -236176605 + L2 LINE L2 3123 3272 0 330 252 48 19 chr2 14511993 14512096 -236175758 - MER5A DNA MER1_type -21 168 63 2358 54 0 0 chr2 14512098 14512393 -236175461 - L1PA4 LINE L1 -1 6154 5860 249 59 0 0 chr2 14512393 14512427 -236175427 + L1PA4 LINE L1 5830 5863 -291 646 204 116 0 chr2 14512767 14512914 -236174940 - FAM SINE Alu -10 165 2 478 341 38 19 chr2 14513264 14513475 -236174379 - MIR SINE MIR -7 255 41 1124 136 16 62 chr2 14514129 14514371 -236173483 + L1PA14 LINE L1 5930 6160 -1 1607 186 42 8 chr2 14514509 14514870 -236172984 - L1MA9 LINE L1 -1 6311 5939 2130 135 122 13 chr2 14516410 14516796 -236171058 + MSTA LTR MaLR 1 428 0 202 359 51 26 chr2 14516833 14516950 -236170904 + MIR SINE MIR 34 153 -109 238 359 81 20 chr2 14517855 14518053 -236169801 - MIR SINE MIR -20 242 33 182 118 29 0 chr2 14518308 14518342 -236169512 + (TA)n Simple_repeat Simple_repeat 1 35 0 1439 104 5 5 chr2 14518662 14518883 -236168971 - pTR5 LTR ERV1 -2046 392 172 294 214 31 20 chr2 14518886 14518984 -236168870 - LTR30 LTR ERV1 -80 642 544 4659 129 95 67 chr2 14518984 14520136 -236167718 - pTR5 LTR ERV1 -413 2025 743 410 329 154 8 chr2 14520387 14520627 -236167227 - L2 LINE L2 0 3313 3039 1407 201 7 34 chr2 14521547 14521845 -236166009 - AluJb SINE Alu -21 291 2 1124 197 12 8 chr2 14522156 14522400 -236165454 - L1MB1 LINE L1 -1 6167 5923 219 250 40 26 chr2 14522525 14522601 -236165253 - MIR SINE MIR -95 113 37 319 347 78 4 chr2 14523239 14523484 -236164370 + L1ME LINE L1 5556 5818 -303 461 291 63 13 chr2 14524830 14524988 -236162866 + MIR SINE MIR 20 185 -77 28 0 0 0 chr2 14525841 14525869 -236161985 + AT_rich Low_complexity Low_complexity 1 28 0 322 301 44 64 chr2 14525919 14526112 -236161742 - MIR SINE MIR -60 202 12 351 65 0 0 chr2 14526637 14526683 -236161171 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 384 181 0 0 chr2 14526674 14526757 -236161097 + (TA)n Simple_repeat Simple_repeat 1 83 0 22 0 0 0 chr2 14527329 14527351 -236160503 + AT_rich Low_complexity Low_complexity 1 22 0 273 327 46 33 chr2 14527761 14527914 -236159940 - MIR SINE MIR -96 166 12 13601 195 27 33 chr2 14528455 14529899 -236157955 + L1MA5A LINE L1 1045 2496 -4443 2067 129 3 3 chr2 14529899 14530194 -236157660 - AluSx SINE Alu -17 295 1 13601 195 27 33 chr2 14530194 14530539 -236157315 + L1MA5A LINE L1 2496 2842 -4097 1840 164 7 7 chr2 14530539 14530826 -236157028 + AluSx SINE Alu 1 287 -25 13601 195 27 33 chr2 14530826 14533091 -236154763 + L1MA5A LINE L1 2842 5119 -1820 1820 143 97 32 chr2 14533091 14533433 -236154421 - THE1B LTR MaLR 0 364 1 13601 195 27 33 chr2 14533433 14533885 -236153969 + L1MA5A LINE L1 5119 5572 -1367 1230 102 23 0 chr2 14533885 14534061 -236153793 - L1MA2 LINE L1 0 6304 6125 13601 195 27 33 chr2 14534061 14535475 -236152379 + L1MA5A LINE L1 5572 6937 -2 1665 213 25 17 chr2 14536650 14537012 -236150842 + MLT1A1 LTR MaLR 1 365 0 333 338 66 7 chr2 14537039 14537175 -236150679 - MIR SINE MIR -116 146 3 241 326 103 87 chr2 14537929 14537987 -236149867 - L2 LINE L2 -10 3262 3206 2067 120 0 23 chr2 14537987 14538287 -236149567 + AluSx SINE Alu 1 293 -19 241 326 103 87 chr2 14538287 14538412 -236149442 - L2 LINE L2 -66 3206 3076 194 320 72 52 chr2 14538497 14538594 -236149260 - L2 LINE L2 -202 3070 2972 321 191 58 164 chr2 14538944 14539133 -236148721 - LTR16A LTR ERVL -2 448 280 206 313 152 0 chr2 14539226 14539325 -236148529 + MIR SINE MIR 139 252 -10 480 274 176 49 chr2 14539501 14539870 -236147984 + L2 LINE L2 2291 2706 -608 23 54 0 0 chr2 14539884 14539921 -236147933 + AT_rich Low_complexity Low_complexity 1 37 0 551 292 73 61 chr2 14540169 14540844 -236147010 - L1ME2 LINE L1 -217 5947 5265 4864 118 22 20 chr2 14540996 14541762 -236146092 - L1PA15 LINE L1 0 6165 5398 1910 303 47 47 chr2 14541868 14542570 -236145284 + MER57-int LTR ERV1 6233 6937 -600 2138 119 0 7 chr2 14542570 14542872 -236144982 - AluSx SINE Alu -8 304 5 1910 303 47 47 chr2 14542872 14543081 -236144773 + MER57-int LTR ERV1 6936 7144 -393 804 187 215 124 chr2 14543081 14543455 -236144399 + MER57B LTR ERV1 1 403 0 648 241 126 0 chr2 14544089 14544263 -236143591 + L3 LINE CR1 1264 1459 -118 302 331 105 8 chr2 14544433 14544557 -236143297 + MIR SINE MIR 46 181 -81 192 250 33 33 chr2 14545974 14546034 -236141820 + L2 LINE L2 3242 3301 -12 1668 212 66 20 chr2 14547118 14547467 -236140387 - MLT1A1 LTR MaLR 0 365 1 412 321 73 0 chr2 14548473 14548638 -236139216 + MIR SINE MIR 8 184 -78 195 300 0 0 chr2 14549129 14549169 -236138685 - MIR SINE MIR -163 99 60 2028 148 45 35 chr2 14550131 14550508 -236137346 + L1MB2 LINE L1 5779 6159 -12 336 102 0 0 chr2 14550510 14550559 -236137295 + (CA)n Simple_repeat Simple_repeat 1 49 0 354 335 57 0 chr2 14550575 14550733 -236137121 + MIR SINE MIR 20 186 -76 296 345 57 11 chr2 14550778 14550955 -236136899 - L2 LINE L2 -504 2810 2626 191 278 37 0 chr2 14551330 14551384 -236136470 + MIR3 SINE MIR 144 199 -9 320 275 91 27 chr2 14551803 14551943 -236135911 + MIR SINE MIR 7 151 -61 325 258 0 94 chr2 14554168 14554296 -236133558 - MER5B DNA MER1_type -62 116 1 2355 94 0 3 chr2 14554524 14554823 -236133031 - AluSx SINE Alu -14 298 1 285 232 21 84 chr2 14555055 14555150 -236132704 + MIR SINE MIR 18 106 -156 210 204 23 0 chr2 14555168 14555212 -236132642 - MIR SINE MIR -109 153 109 365 253 12 0 chr2 14555721 14555804 -236132050 + MIR3 SINE MIR 90 173 -35 233 298 128 66 chr2 14557196 14557427 -236130427 - MIR3 SINE MIR -10 252 4 386 318 106 23 chr2 14558288 14558505 -236129349 - MIR SINE MIR -27 235 1 2172 108 10 3 chr2 14559349 14559654 -236128200 - AluSq SINE Alu -6 307 1 192 326 20 0 chr2 14559667 14559716 -236128138 + L2 LINE L2 3129 3178 -94 483 232 42 28 chr2 14560369 14560511 -236127343 + L2 LINE L2 3166 3309 -4 343 309 112 78 chr2 14562121 14562367 -236125487 - L1ME4a LINE L1 -225 5896 5660 2172 169 37 5 chr2 14562367 14562745 -236125109 + MLT1B LTR MaLR 1 390 0 343 309 112 78 chr2 14562745 14563026 -236124828 - L1ME4a LINE L1 -461 5660 5351 372 293 176 24 chr2 14563560 14563765 -236124089 + MIR SINE MIR 20 255 -7 348 265 37 22 chr2 14565051 14565187 -236122667 + L3 LINE CR1 1223 1360 -217 330 239 261 23 chr2 14565438 14565568 -236122286 + MIR SINE MIR 8 168 -94 2280 77 30 0 chr2 14565691 14565991 -236121863 - AluY SINE Alu -2 309 1 1346 222 121 27 chr2 14566994 14567185 -236120669 + L1MD2 LINE L1 5914 6086 -273 231 36 0 0 chr2 14567185 14567213 -236120641 + (CA)n Simple_repeat Simple_repeat 2 29 0 1346 222 121 27 chr2 14567213 14567293 -236120561 + L1MD2 LINE L1 6086 6157 -202 1176 151 84 36 chr2 14567293 14567518 -236120336 - MER46A DNA MER2_type 0 236 1 1346 222 121 27 chr2 14567518 14567650 -236120204 + L1MD2 LINE L1 6157 6356 -3 240 174 0 70 chr2 14568912 14568998 -236118856 + (TATATG)n Simple_repeat Simple_repeat 2 81 0 228 322 11 23 chr2 14569460 14569547 -236118307 + L2 LINE L2 3182 3267 -5 305 301 14 27 chr2 14569982 14570128 -236117726 - L1ME4a LINE L1 -209 5912 5769 639 179 138 0 chr2 14571390 14571535 -236116319 + MER3 DNA MER1_type 40 204 -5 191 347 194 10 chr2 14571549 14571647 -236116207 + L2 LINE L2 2909 3024 -248 279 232 62 54 chr2 14573008 14573120 -236114734 - MIR SINE MIR -54 208 96 266 304 25 0 chr2 14574310 14574389 -236113465 - MIR3 SINE MIR -46 162 82 3271 144 22 38 chr2 14574936 14575470 -236112384 - MER1A DNA MER1_type -1 526 1 203 328 85 21 chr2 14575833 14576022 -236111832 + MIR SINE MIR 31 231 -31 240 227 160 0 chr2 14576794 14576869 -236110985 - L1MC4 LINE L1 -1341 6701 6615 242 194 16 0 chr2 14576873 14576935 -236110919 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 266 227 20 193 chr2 14577832 14577982 -236109872 + MIR SINE MIR 20 143 -119 222 118 0 0 chr2 14578104 14578138 -236109716 + (TTA)n Simple_repeat Simple_repeat 2 35 0 201 356 37 15 chr2 14579652 14579787 -236108067 + MER5A DNA MER1_type 17 154 -35 512 269 72 14 chr2 14580410 14580618 -236107236 + MIR SINE MIR 2 221 -41 22 35 0 0 chr2 14581199 14581228 -236106626 + AT_rich Low_complexity Low_complexity 1 29 0 287 262 148 49 chr2 14582278 14582400 -236105454 - MIR SINE MIR -71 191 58 1008 260 54 80 chr2 14582572 14583057 -236104797 + L2 LINE L2 2841 3312 -1 213 39 0 0 chr2 14583076 14583102 -236104752 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 27 29 0 0 chr2 14583109 14583143 -236104711 + AT_rich Low_complexity Low_complexity 1 34 0 767 320 28 49 chr2 14584534 14584818 -236103036 + L1MDb LINE L1 138 415 -6128 2235 220 99 27 chr2 14584823 14585522 -236102332 + L1MDb LINE L1 1531 2279 -4261 795 251 52 21 chr2 14585526 14585853 -236102001 + L1M4 LINE L1 4080 4416 -1730 634 211 58 2 chr2 14585866 14586065 -236101789 + MSTC LTR MaLR 1 210 -186 685 151 196 22 chr2 14586066 14586245 -236101609 + L1MD2 LINE L1 5870 6079 -280 3884 165 10 14 chr2 14586245 14586959 -236100895 + MER50 LTR ERV1 1 711 -23 1406 173 14 14 chr2 14586959 14587243 -236100611 + L1MD2 LINE L1 6075 6358 -1 251 306 74 46 chr2 14588061 14588169 -236099685 + MIR SINE MIR 65 175 -87 2409 76 0 3 chr2 14589571 14589872 -236097982 + AluY SINE Alu 1 300 -11 291 344 65 19 chr2 14590422 14590576 -236097278 + MIR SINE MIR 100 260 -2 1878 157 41 3 chr2 14590623 14590917 -236096937 - AluJb SINE Alu -7 305 1 240 233 0 0 chr2 14592244 14592287 -236095567 + MIR SINE MIR 206 248 -14 2144 96 7 0 chr2 14593239 14593564 -236094290 - AluSp SINE Alu 0 327 1 382 254 94 43 chr2 14593688 14593826 -236094028 + MIR SINE MIR 40 184 -78 355 316 68 23 chr2 14593961 14594138 -236093716 + MIR SINE MIR 66 250 -12 957 209 145 59 chr2 14594448 14594573 -236093281 + L1MC4a LINE L1 6138 6251 -1557 570 71 0 0 chr2 14594573 14594657 -236093197 + (TG)n Simple_repeat Simple_repeat 1 84 0 957 209 145 59 chr2 14594657 14594703 -236093151 + L1MC4a LINE L1 6251 6292 -1516 1652 190 16 10 chr2 14594703 14595013 -236092841 + AluJo SINE Alu 1 312 0 957 209 145 59 chr2 14595013 14595246 -236092608 + L1MC4a LINE L1 6292 6578 -1230 3917 66 2 0 chr2 14595246 14595748 -236092106 + L1PA5 LINE L1 5652 6154 0 2350 120 20 32 chr2 14595784 14596335 -236091519 + L1MA2 LINE L1 3207 3749 -3816 1315 225 68 6 chr2 14596335 14596673 -236091181 + THE1B LTR MaLR 6 364 0 8673 138 38 43 chr2 14596675 14598261 -236089593 + THE1C-int LTR MaLR 3 1580 0 1628 168 85 26 chr2 14598263 14598615 -236089239 + THE1C LTR MaLR 3 375 0 3347 223 52 15 chr2 14598626 14598801 -236089053 + L1MA2 LINE L1 3769 3936 -3629 2115 122 47 39 chr2 14598801 14599162 -236088692 - THE1B LTR MaLR 0 364 1 3347 223 52 15 chr2 14599162 14600250 -236087604 + L1MA2 LINE L1 3936 5140 -2425 * 6537 134 10 2 chr2 14600246 14602003 -236085851 + L1MA2 LINE L1 5955 7723 0 368 243 114 4 chr2 14602026 14602236 -236085618 + L1MD3 LINE L1 7559 7985 0 268 349 77 0 chr2 14602924 14603119 -236084735 + L2 LINE L2 2610 2819 -495 2355 104 41 16 chr2 14603300 14603665 -236084189 + THE1C LTR MaLR 1 374 -1 500 272 66 0 chr2 14603769 14603905 -236083949 - MIR SINE MIR -51 211 67 254 354 0 0 chr2 14603934 14604013 -236083841 + L2 LINE L2 3186 3264 -8 212 371 34 34 chr2 14604291 14604380 -236083474 + MIR SINE MIR 3 91 -171 190 210 290 16 chr2 14604853 14604915 -236082939 + MIR SINE MIR 23 101 -107 212 306 97 93 chr2 14604966 14605182 -236082672 - L2 LINE L2 -94 3219 3003 * 324 333 0 18 chr2 14605173 14605287 -236082567 + MIR3 SINE MIR 93 204 -4 189 336 63 35 chr2 14606468 14606611 -236081243 - MIR3 SINE MIR -46 162 16 21 0 0 0 chr2 14608621 14608642 -236079212 + AT_rich Low_complexity Low_complexity 1 21 0 2004 119 13 23 chr2 14609151 14609454 -236078400 - AluSx SINE Alu -12 300 1 6141 64 6 73 chr2 14610048 14611019 -236076835 - SVA Other Other 0 1386 481 182 308 0 15 chr2 14612062 14612127 -236075727 + MIR SINE MIR 186 249 -13 601 307 4 57 chr2 14612621 14612865 -236074989 + MIR SINE MIR 18 248 -14 312 252 135 1 chr2 14613403 14613503 -236074351 - MIR SINE MIR -93 115 3 227 316 53 0 chr2 14613975 14614108 -236073746 + L1MC4 LINE L1 7898 8037 -5 2033 99 0 0 chr2 14614309 14614571 -236073283 + AluSc SINE Alu 35 296 -13 569 209 223 0 chr2 14616664 14616812 -236071042 + MER5A DNA MER1_type 9 189 0 354 229 82 16 chr2 14616873 14616995 -236070859 + MIR SINE MIR 107 236 -26 1762 179 39 6 chr2 14617519 14617876 -236069978 - L1MA6 LINE L1 -1877 4269 3901 * 5265 157 37 25 chr2 14617874 14619786 -236068068 + L1MA6 LINE L1 4276 6236 -64 2327 113 3 0 chr2 14619786 14620097 -236067757 + AluSx SINE Alu 1 312 0 5265 157 37 25 chr2 14620097 14620163 -236067691 + L1MA6 LINE L1 6236 6300 0 2203 120 3 3 chr2 14620226 14620535 -236067319 + AluSq SINE Alu 1 309 -4 189 0 0 0 chr2 14621120 14621141 -236066713 + (A)n Simple_repeat Simple_repeat 1 21 0 242 355 118 18 chr2 14621616 14621895 -236065959 + L2 LINE L2 2936 3242 -30 325 277 50 0 chr2 14622165 14622266 -236065588 + MIR SINE MIR 46 151 -111 405 174 91 50 chr2 14623606 14623727 -236064127 - MIR SINE MIR -7 255 130 321 313 116 45 chr2 14625611 14625835 -236062019 + MIR SINE MIR 12 251 -11 558 272 119 25 chr2 14625870 14626072 -236061782 - MIR SINE MIR -1 261 41 605 230 72 34 chr2 14626284 14626549 -236061305 + L1MC5 LINE L1 7611 7885 -76 181 197 0 99 chr2 14626571 14626642 -236061212 - MIR SINE MIR -82 180 117 1653 128 135 4 chr2 14627008 14627282 -236060572 + AluJb SINE Alu 1 310 -2 37 81 0 0 chr2 14627323 14627409 -236060445 + AT_rich Low_complexity Low_complexity 1 86 0 1186 95 0 24 chr2 14628287 14628498 -236059356 - AluSg/x SINE Alu 0 335 127 2359 76 0 7 chr2 14628498 14628801 -236059053 - AluSg SINE Alu -9 301 1 386 356 53 22 chr2 14629718 14630038 -236057816 + L1ME4a LINE L1 5630 5959 -162 255 61 0 0 chr2 14630096 14630129 -236057725 + (TG)n Simple_repeat Simple_repeat 2 34 0 212 161 0 18 chr2 14630129 14630147 -236057707 + (TA)n Simple_repeat Simple_repeat 2 19 -37 1165 162 83 5 chr2 14630147 14630363 -236057491 - MER46A DNA MER2_type -3 233 1 212 161 0 18 chr2 14630363 14630400 -236057454 + (TA)n Simple_repeat Simple_repeat 19 56 0 183 80 0 0 chr2 14630416 14630441 -236057413 + (CATATA)n Simple_repeat Simple_repeat 6 30 0 21 36 0 0 chr2 14630619 14630647 -236057207 + AT_rich Low_complexity Low_complexity 1 28 0 2020 81 0 50 chr2 14631065 14631362 -236056492 + AluY SINE Alu 19 300 -11 239 339 39 31 chr2 14631658 14631785 -236056069 - MIR SINE MIR -60 148 21 446 301 142 19 chr2 14632203 14632412 -236055442 + MIR SINE MIR 10 248 -14 198 323 48 16 chr2 14632541 14632665 -236055189 + L2 LINE L2 2776 2903 -411 690 201 14 0 chr2 14633739 14633878 -236053976 + L2 LINE L2 2501 2641 -673 392 297 117 34 chr2 14633929 14634168 -236053686 + MLT1J1 LTR MaLR 65 323 -123 572 266 123 30 chr2 14635815 14636233 -236051621 + L2 LINE L2 2677 3128 -185 205 327 18 0 chr2 14636263 14636318 -236051536 + L2 LINE L2 3230 3285 -28 564 77 0 0 chr2 14636326 14636404 -236051450 + (TGGA)n Simple_repeat Simple_repeat 1 78 0 685 253 10 21 chr2 14636515 14636709 -236051145 - MER58C DNA MER1_type -23 192 1 387 374 37 41 chr2 14636938 14637184 -236050670 + L2 LINE L2 3027 3271 -1 350 283 68 118 chr2 14637477 14637859 -236049995 - L2 LINE L2 -1 3271 2909 406 151 0 0 chr2 14637878 14637951 -236049903 - MER41B LTR ERV1 -1 634 562 2567 116 50 0 chr2 14637951 14638390 -236049464 + L1PA7 LINE L1 1976 2436 -3710 303 163 0 0 chr2 14638407 14638487 -236049367 + (TA)n Simple_repeat Simple_repeat 1 80 0 20594 77 8 0 chr2 14638525 14642196 -236045658 + L1PA7 LINE L1 2480 6154 0 3108 101 30 0 chr2 14642207 14642672 -236045182 - MER41A LTR ERV1 -75 479 1 2399 87 3 0 chr2 14642944 14643255 -236044599 + AluSp SINE Alu 2 313 0 471 341 82 39 chr2 14643490 14643795 -236044059 - L2 LINE L2 -14 3258 2941 944 240 93 20 chr2 14644219 14644519 -236043335 + Charlie2 DNA MER1_type 1 322 -2460 2967 158 128 11 chr2 14644535 14645168 -236042686 + LTR8A LTR ERV1 2 708 -19 245 179 0 36 chr2 14645201 14645257 -236042597 + Charlie2 DNA MER1_type 1878 1931 -931 7517 184 31 12 chr2 14645288 14645630 -236042224 - L1PB1 LINE L1 -9 6142 5808 207 0 0 0 chr2 14645630 14645653 -236042201 + (TG)n Simple_repeat Simple_repeat 1 23 0 7517 184 31 12 chr2 14645653 14647020 -236040834 - L1PB1 LINE L1 -343 5808 4354 180 0 0 0 chr2 14647020 14647040 -236040814 + (TTA)n Simple_repeat Simple_repeat 2 21 0 7517 184 31 12 chr2 14647040 14648116 -236039738 - L1PB1 LINE L1 -1797 4354 3301 1915 127 22 0 chr2 14648123 14648399 -236039455 - AluSx SINE Alu -10 302 21 1209 216 60 24 chr2 14648399 14648769 -236039085 + Charlie2 DNA MER1_type 1916 2298 -564 4519 59 26 17 chr2 14648780 14649808 -236038046 + MER11A LTR ERVK 1 1266 0 238 250 168 53 chr2 14649808 14650008 -236037846 + Charlie2 DNA MER1_type 2308 2531 -331 1393 207 90 18 chr2 14650008 14650490 -236037364 + MER67B LTR ERV1 1 418 -243 436 233 38 18 chr2 14650461 14650692 -236037162 + MER67A LTR ERV1 273 543 0 * 522 189 161 23 chr2 14650714 14650931 -236036923 + Charlie2 DNA MER1_type 2555 2801 -61 291 330 45 27 chr2 14650999 14651111 -236036743 + MER5A DNA MER1_type 7 120 -69 279 116 0 0 chr2 14651468 14651511 -236036343 + MER112 DNA MER1_type 1 43 -217 407 298 61 17 chr2 14652982 14653163 -236034691 + MLT1K LTR MaLR 383 571 -17 181 331 169 0 chr2 14653207 14653331 -236034523 - MIR3 SINE MIR -62 146 2 835 181 0 0 chr2 14653878 14654011 -236033843 - AluJb SINE Alu -23 289 157 724 152 0 0 chr2 14654013 14654118 -236033736 - AluSq/x SINE Alu -206 107 3 225 355 59 33 chr2 14654122 14654274 -236033580 + L2 LINE L2 2688 2843 -471 350 337 84 17 chr2 14655339 14655517 -236032337 + MIR SINE MIR 12 201 -61 1940 121 95 14 chr2 14656666 14657013 -236030841 + THE1C LTR MaLR 1 375 0 388 241 0 46 chr2 14657087 14657195 -236030659 + L2 LINE L2 1245 1347 -1967 250 329 24 0 chr2 14657195 14657280 -236030574 + L2 LINE L2 1499 1585 -1729 26 0 0 0 chr2 14657298 14657324 -236030530 + AT_rich Low_complexity Low_complexity 1 26 0 681 321 60 0 chr2 14657395 14657647 -236030207 + L2 LINE L2 2069 2335 -979 414 89 89 54 chr2 14657649 14657761 -236030093 - L1MD3 LINE L1 -1 7994 7879 223 369 83 0 chr2 14657932 14658016 -236029838 + L2 LINE L2 3145 3235 -37 22 0 0 0 chr2 14658427 14658449 -236029405 + AT_rich Low_complexity Low_complexity 1 22 0 514 236 208 5 chr2 14659099 14659315 -236028539 + Charlie5 DNA MER1_type 2364 2623 0 23 0 0 0 chr2 14660061 14660084 -236027770 + AT_rich Low_complexity Low_complexity 1 23 0 3664 175 64 9 chr2 14660165 14660902 -236026952 + Charlie1 DNA MER1_type 1851 2643 -118 1905 118 56 7 chr2 14660902 14661189 -236026665 - AluSc SINE Alu -8 301 1 3664 175 64 9 chr2 14661189 14661309 -236026545 + Charlie1 DNA MER1_type 2643 2755 -6 354 285 181 7 chr2 14664204 14664348 -236023506 + MIR SINE MIR 1 169 -93 226 301 12 48 chr2 14664412 14664495 -236023359 - MIR SINE MIR -175 87 8 2194 91 7 24 chr2 14664520 14664818 -236023036 + AluY SINE Alu 1 293 -18 2067 128 0 55 chr2 14665482 14665809 -236022045 - AluSx SINE Alu -3 309 1 328 283 19 19 chr2 14666698 14666814 -236021040 + MIR SINE MIR 40 154 -70 467 374 28 0 chr2 14667294 14667473 -236020381 + MIR3 SINE MIR 16 199 -9 268 397 11 35 chr2 14669128 14669302 -236018552 + L2 LINE L2 3096 3265 -7 207 289 0 0 chr2 14669329 14669374 -236018480 - L2 LINE L2 -23 3249 3205 185 309 18 0 chr2 14669982 14670037 -236017817 - MIR SINE MIR -64 144 89 233 216 10 69 chr2 14671057 14671159 -236016695 + GA-rich Low_complexity Low_complexity 3 98 0 323 220 212 0 chr2 14671204 14671322 -236016532 - MIR SINE MIR -64 198 56 285 330 113 22 chr2 14672257 14672442 -236015412 - MIR SINE MIR 0 262 61 522 277 181 70 chr2 14673513 14673906 -236013948 + L2 LINE L2 2839 3269 -3 2570 98 13 16 chr2 14674028 14674404 -236013450 + THE1C LTR MaLR 1 375 0 305 327 102 29 chr2 14674414 14674619 -236013235 - MIR SINE MIR -38 224 5 328 349 8 23 chr2 14675046 14675175 -236012679 - MIR SINE MIR -111 151 25 920 330 63 67 chr2 14675989 14676383 -236011471 + L2 LINE L2 1947 2341 -931 2162 109 0 23 chr2 14676383 14676686 -236011168 - AluSx SINE Alu -16 296 1 920 330 63 67 chr2 14676686 14677625 -236010229 + L2 LINE L2 2341 3272 0 720 166 41 59 chr2 14678130 14678299 -236009555 + MER20 DNA MER1_type 1 166 -53 322 333 105 18 chr2 14678895 14679066 -236008788 - L2 LINE L2 -2 3270 3085 472 216 60 65 chr2 14679565 14679750 -236008104 - MER58C DNA MER1_type 0 215 32 1419 198 38 42 chr2 14679791 14679905 -236007949 - AluJo SINE Alu 0 312 199 183 80 0 0 chr2 14679905 14679930 -236007924 + (CCCA)n Simple_repeat Simple_repeat 2 26 0 1419 198 38 42 chr2 14679930 14680128 -236007726 - AluJo SINE Alu -113 199 1 2130 129 7 3 chr2 14680442 14680745 -236007109 + AluSc SINE Alu 1 304 -5 474 154 46 0 chr2 14680745 14680875 -236006979 + GA-rich Low_complexity Low_complexity 2 137 0 305 312 214 0 chr2 14681322 14681476 -236006378 + MIR3 SINE MIR 19 205 -3 707 267 42 33 chr2 14681918 14682158 -236005696 + MIR SINE MIR 14 255 -7 1890 134 0 50 chr2 14682709 14683007 -236004847 - AluSx SINE Alu -25 287 5 347 356 141 20 chr2 14684759 14685065 -236002789 - L2 LINE L2 -1 3271 2929 433 299 66 6 chr2 14686145 14686312 -236001542 + MIR SINE MIR 73 249 -13 247 333 111 21 chr2 14686510 14686654 -236001200 + MIR SINE MIR 26 182 -80 219 333 83 0 chr2 14686871 14686955 -236000899 + MIR3 SINE MIR 104 194 -14 1717 142 60 11 chr2 14686983 14687280 -236000574 + AluSx SINE Alu 1 310 0 1370 159 4 37 chr2 14687322 14687599 -236000255 + AluJo SINE Alu 48 316 0 253 309 114 57 chr2 14687815 14687990 -235999864 - MIR SINE MIR -59 203 19 1840 148 143 13 chr2 14688081 14688460 -235999394 + MSTA LTR MaLR 1 428 0 231 61 0 0 chr2 14688583 14688616 -235999238 + (TG)n Simple_repeat Simple_repeat 2 34 0 755 160 0 30 chr2 14688785 14688916 -235998938 + FLAM_C SINE Alu 1 127 -16 554 151 123 84 chr2 14692116 14692295 -235995559 - MER21A LTR ERV1 0 931 746 277 267 12 12 chr2 14692293 14692379 -235995475 - MLT2A2 LTR ERVL -175 278 193 * 187 317 0 87 chr2 14692428 14692532 -235995322 - L2 LINE L2 -164 3108 3014 261 365 33 43 chr2 14692656 14692867 -235994987 - L2 LINE L2 -556 2758 2550 2040 171 35 29 chr2 14693383 14693934 -235993920 + MLT2A2 LTR ERVL 1 554 0 1963 146 58 22 chr2 14694794 14695156 -235992698 + THE1C LTR MaLR 1 375 0 2668 129 21 5 chr2 14695156 14695638 -235992216 + THE1C-int LTR MaLR 1 486 -1150 1300 102 5 15 chr2 14695647 14695844 -235992010 + THE1C-int LTR MaLR 1386 1580 0 1833 134 62 56 chr2 14695844 14696176 -235991678 + THE1C LTR MaLR 1 337 -38 2299 91 20 0 chr2 14696176 14696473 -235991381 - AluSq SINE Alu -10 303 1 1833 134 62 56 chr2 14696473 14696513 -235991341 + THE1C LTR MaLR 337 375 0 2080 24 0 0 chr2 14699368 14699618 -235988236 - L1P LINE L1 -1976 4170 3921 1186 0 0 0 chr2 14699618 14699780 -235988074 + L1PA3 LINE L1 6014 6176 0 516 254 90 25 chr2 14701393 14701637 -235986217 + MER74B LTR ERVL 363 622 0 1001 172 78 16 chr2 14701782 14702038 -235985816 - MER46C DNA MER2_type -39 299 28 1488 210 7 23 chr2 14702993 14703303 -235984551 - AluJo SINE Alu -7 305 1 25 75 0 0 chr2 14703980 14704033 -235983821 + AT_rich Low_complexity Low_complexity 1 53 0 363 250 19 28 chr2 14704279 14704387 -235983467 - L1MC/D LINE L1 -2124 5684 5578 582 244 54 66 chr2 14704732 14704798 -235983056 + L1ME LINE L1 39 104 -5966 1936 151 0 22 chr2 14704798 14705117 -235982737 + AluSx SINE Alu 1 312 0 582 244 54 66 chr2 14705117 14705308 -235982546 + L1ME LINE L1 104 293 -5777 1359 228 84 39 chr2 14705343 14705878 -235981976 + L1ME2 LINE L1 5579 6137 -27 25 0 0 0 chr2 14706824 14706849 -235981005 + AT_rich Low_complexity Low_complexity 1 25 0 35634 87 8 8 chr2 14706981 14713158 -235974696 + L1PA6 LINE L1 11 6154 0 21 36 0 0 chr2 14713689 14713717 -235974137 + AT_rich Low_complexity Low_complexity 1 28 0 1377 181 4 20 chr2 14714311 14714608 -235973246 + AluJo SINE Alu 37 329 0 191 349 0 0 chr2 14714671 14714734 -235973120 - MER5B DNA MER1_type -113 65 3 204 269 0 0 chr2 14714889 14714941 -235972913 - MIR SINE MIR -111 151 100 374 324 79 79 chr2 14715132 14715450 -235972404 + L2 LINE L2 2925 3242 -30 2082 148 14 6 chr2 14715905 14716256 -235971598 - Tigger1 DNA MER2_type 0 2418 2065 * 5172 129 22 4 chr2 14716237 14717066 -235970788 - Tigger1 DNA MER2_type -1571 847 4 337 283 128 41 chr2 14717728 14717947 -235969907 + MLT1J LTR MaLR 102 339 -172 251 313 0 20 chr2 14719041 14719140 -235968714 + GA-rich Low_complexity Low_complexity 4 100 0 999 296 152 17 chr2 14719995 14720790 -235967064 + L2 LINE L2 2402 3313 0 24 32 0 0 chr2 14721854 14721885 -235965969 + AT_rich Low_complexity Low_complexity 1 31 0 2266 234 16 45 chr2 14722478 14723123 -235964731 + MLT1E2 LTR MaLR 1 626 0 21 107 0 0 chr2 14723337 14723421 -235964433 + AT_rich Low_complexity Low_complexity 1 84 0 293 327 201 28 chr2 14724044 14724298 -235963556 - L2 LINE L2 -452 2862 2565 406 266 85 40 chr2 14724707 14724884 -235962970 - MIR SINE MIR -1 261 77 2419 74 3 0 chr2 14724912 14725209 -235962645 - AluY SINE Alu -8 303 6 349 327 31 19 chr2 14725320 14725479 -235962375 - L1ME4a LINE L1 0 6121 5961 840 215 54 0 chr2 14725549 14725754 -235962100 - L1ME3A LINE L1 -85 6085 5870 709 158 0 24 chr2 14725798 14725925 -235961929 + FLAM_C SINE Alu 18 141 -2 1558 244 78 10 chr2 14725934 14726619 -235961235 - L1ME3A LINE L1 -355 5815 5086 1047 179 28 32 chr2 14726620 14726838 -235961016 + AluJo SINE Alu 85 301 -11 222 301 68 29 chr2 14726968 14727071 -235960783 + L2 LINE L2 3146 3252 -61 2003 131 7 0 chr2 14727178 14727469 -235960385 + AluSg SINE Alu 1 293 -17 746 195 0 0 chr2 14727724 14727852 -235960002 + AluJo SINE Alu 7 134 -178 33 56 0 0 chr2 14727854 14727908 -235959946 + AT_rich Low_complexity Low_complexity 1 54 0 650 200 131 0 chr2 14727908 14728017 -235959837 + AluJo SINE Alu 144 278 -34 1222 88 0 6 chr2 14728017 14728188 -235959666 + L1PB1 LINE L1 5980 6149 -2 650 200 131 0 chr2 14728188 14728223 -235959631 + AluJo SINE Alu 278 307 -5 405 39 0 0 chr2 14729387 14729438 -235958416 + (CA)n Simple_repeat Simple_repeat 2 52 0 1783 163 0 17 chr2 14729454 14729748 -235958106 + AluJo SINE Alu 1 289 -23 253 378 51 10 chr2 14729980 14730078 -235957776 - L2 LINE L2 -30 3242 3141 2451 267 88 77 chr2 14730218 14731708 -235956146 - L2 LINE L2 0 3313 1812 1844 176 0 14 chr2 14731830 14732166 -235955688 + AluSx SINE Alu 1 312 0 25 0 0 0 chr2 14732319 14732344 -235955510 + AT_rich Low_complexity Low_complexity 1 25 0 281 262 58 58 chr2 14732901 14733010 -235954844 + L1ME4a LINE L1 5672 5780 -341 247 75 0 38 chr2 14733010 14733063 -235954791 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 281 262 58 58 chr2 14733063 14733228 -235954626 + L1ME4a LINE L1 5779 5946 -175 32 43 0 0 chr2 14733401 14733447 -235954407 + AT_rich Low_complexity Low_complexity 1 46 0 228 224 17 0 chr2 14734331 14734389 -235953465 - L1ME3A LINE L1 -1158 4988 4930 921 196 41 78 chr2 14734452 14734955 -235952899 + L1M4 LINE L1 5009 5482 -696 13247 107 10 4 chr2 14734978 14737859 -235949995 + L1PA8A LINE L1 3230 6122 -9 1281 203 47 17 chr2 14737863 14738159 -235949695 + L1M4 LINE L1 5474 5778 -406 250 222 0 0 chr2 14740309 14740363 -235947491 + MER3 DNA MER1_type 37 90 -119 * 436 125 0 0 chr2 14740326 14740398 -235947456 - MER3 DNA MER1_type -6 203 132 837 159 30 0 chr2 14740398 14740530 -235947324 + AluSq/x SINE Alu 1 136 -177 644 247 7 27 chr2 14740530 14740680 -235947174 - MER3 DNA MER1_type -62 147 1 25 0 0 0 chr2 14740816 14740841 -235947013 + AT_rich Low_complexity Low_complexity 1 25 0 1156 276 73 83 chr2 14741405 14742121 -235945733 + L1ME3A LINE L1 5301 6008 -162 1922 135 14 3 chr2 14742121 14742410 -235945444 + AluSx SINE Alu 1 292 -20 1156 276 73 83 chr2 14742410 14742557 -235945297 + L1ME3A LINE L1 6008 6155 -15 306 0 0 0 chr2 14742597 14742631 -235945223 + (CA)n Simple_repeat Simple_repeat 1 34 0 3688 176 20 16 chr2 14743038 14743744 -235944110 - MER50 LTR ERV1 -23 711 3 206 234 21 0 chr2 14744847 14744894 -235942960 + MIR SINE MIR 144 191 -71 1655 196 31 54 chr2 14745609 14746001 -235941853 - MER31-int LTR ERV1 -1965 5572 5190 1189 190 48 48 chr2 14745989 14746152 -235941702 - MER31-int LTR ERV1 -1885 3051 2889 * 864 178 70 19 chr2 14746152 14746309 -235941545 - FRAM SINE Alu 0 166 2 1189 190 48 48 chr2 14746309 14746476 -235941378 - MER31-int LTR ERV1 -2046 2890 2721 1663 164 86 17 chr2 14746477 14746769 -235941085 + AluJb SINE Alu 1 312 0 651 243 30 78 chr2 14746783 14746816 -235941038 - MER31-int LTR ERV1 -2205 2731 2698 2066 159 86 21 chr2 14746816 14747188 -235940666 - MSTD LTR MaLR 0 396 1 651 243 30 78 chr2 14747188 14747422 -235940432 - MER31-int LTR ERV1 -2238 2698 2477 762 233 14 33 chr2 14747428 14747638 -235940216 - MER31-int LTR ERV1 -2561 2562 2357 361 378 46 26 chr2 14747694 14747996 -235939858 + L2 LINE L2 2919 3226 -46 2436 77 6 6 chr2 14748615 14748927 -235938927 - AluSp SINE Alu -1 312 1 372 341 24 6 chr2 14749024 14749188 -235938666 - L3 LINE CR1 -179 1398 1232 833 283 60 0 chr2 14749922 14750155 -235937699 - MIR SINE MIR -3 259 13 296 323 81 10 chr2 14750165 14750264 -235937590 + L2 LINE L2 3202 3307 -6 784 214 52 6 chr2 14750347 14750520 -235937334 - MER5A DNA MER1_type -2 187 7 351 78 0 0 chr2 14750804 14750855 -235936999 + (CA)n Simple_repeat Simple_repeat 2 52 0 224 222 67 4 chr2 14751484 14751549 -235936305 - MIR SINE MIR -135 73 4 254 288 68 34 chr2 14751653 14751771 -235936083 + L2 LINE L2 3185 3306 -7 3275 77 70 0 chr2 14752128 14752170 -235935684 - MLT2A1 LTR ERVL 0 444 406 253 61 20 20 chr2 14752170 14752219 -235935635 + (TA)n Simple_repeat Simple_repeat 2 50 0 3275 77 70 0 chr2 14752219 14752591 -235935263 - MLT2A1 LTR ERVL -38 406 1 184 240 147 0 chr2 14752626 14752701 -235935153 + L3 LINE CR1 1253 1338 -239 336 284 119 45 chr2 14752868 14753044 -235934810 + MIR SINE MIR 8 196 -66 216 0 0 0 chr2 14754534 14754558 -235933296 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 259 279 50 83 chr2 14754726 14754928 -235932926 + MIR SINE MIR 23 217 -45 268 243 9 9 chr2 14755016 14755123 -235932731 + GA-rich Low_complexity Low_complexity 2 108 0 292 312 117 32 chr2 14755651 14755805 -235932049 - MIR SINE MIR -48 214 48 1821 245 85 35 chr2 14755832 14756374 -235931480 - MLT1G1 LTR MaLR -25 570 2 278 50 25 0 chr2 14756704 14756744 -235931110 + (CA)n Simple_repeat Simple_repeat 1 41 0 952 145 50 13 chr2 14758302 14758461 -235929393 + FRAM SINE Alu 1 162 -14 1450 196 68 27 chr2 14758992 14759201 -235928653 - MLT1A1 LTR MaLR -14 351 121 2063 123 63 36 chr2 14759201 14759566 -235928288 - THE1C LTR MaLR 0 375 1 1450 196 68 27 chr2 14759566 14759693 -235928161 - MLT1A1 LTR MaLR -244 121 1 917 239 43 10 chr2 14759694 14759903 -235927951 + MER58A DNA MER1_type 1 216 -8 1524 81 72 32 chr2 14760250 14760471 -235927383 - MER30 DNA MER1_type 0 230 1 216 67 0 0 chr2 14761756 14761786 -235926068 + (GA)n Simple_repeat Simple_repeat 1 30 0 1566 208 14 20 chr2 14761786 14762142 -235925712 - MLT1A1 LTR MaLR -1 364 11 294 29 0 0 chr2 14762151 14762186 -235925668 + (GA)n Simple_repeat Simple_repeat 2 36 0 299 286 65 129 chr2 14762710 14763122 -235924732 + L2 LINE L2 2866 3251 -21 4216 121 35 33 chr2 14763478 14764170 -235923684 - L1MC1 LINE L1 -5 6328 5636 2134 168 94 8 chr2 14764173 14764567 -235923287 + MSTA LTR MaLR 1 428 0 379 0 0 0 chr2 14764596 14764640 -235923214 + L1PA3 LINE L1 6109 6152 -3 265 300 11 11 chr2 14764757 14764847 -235923007 - MIR SINE MIR -125 137 48 29 0 0 0 chr2 14765027 14765056 -235922798 + AT_rich Low_complexity Low_complexity 1 29 0 283 219 207 0 chr2 14765301 14765383 -235922471 - Charlie7 DNA MER1_type -2513 99 1 216 325 151 0 chr2 14765557 14765723 -235922131 + MIR SINE MIR 2 192 -70 1626 199 93 30 chr2 14765891 14766311 -235921543 + L1MB5 LINE L1 5711 6159 -15 1166 213 106 10 chr2 14767815 14768116 -235919738 - MER46C DNA MER2_type -8 330 1 694 212 179 0 chr2 14769040 14769191 -235918663 - MER45A DNA AcHobo 0 178 1 478 332 62 5 chr2 14769257 14769465 -235918389 + MIR SINE MIR 36 255 -7 771 214 33 33 chr2 14769617 14769832 -235918022 + LTR16C LTR ERVL 190 404 -87 2561 175 19 9 chr2 14769838 14770260 -235917594 - MSTB LTR MaLR 0 426 1 7054 195 41 33 chr2 14770260 14770656 -235917198 - MLT1A1-int LTR MaLR 0 1651 1260 2735 161 26 0 chr2 14770656 14771073 -235916781 + MSTA LTR MaLR 1 428 0 7054 195 41 33 chr2 14771073 14772375 -235915479 - MLT1A1-int LTR MaLR -391 1260 4 2461 120 35 107 chr2 14772379 14772838 -235915016 - MSTB LTR MaLR 0 426 1 231 167 0 0 chr2 14772848 14772890 -235914964 + LTR16C LTR ERVL 449 490 -1 2248 120 31 111 chr2 14773639 14774089 -235913765 + MSTB LTR MaLR 1 414 -12 1867 209 10 33 chr2 14774229 14774716 -235913138 - Charlie4a DNA MER1_type -7 501 26 263 331 40 54 chr2 14775632 14775780 -235912074 + MIR SINE MIR 42 187 -75 442 273 84 21 chr2 14775848 14775991 -235911863 + MIR SINE MIR 92 243 -19 2121 83 9 94 chr2 14776600 14776939 -235910915 + AluSq SINE Alu 1 310 -3 923 233 125 66 chr2 14777321 14777849 -235910005 - MLT1H1 LTR MaLR -4 622 2 360 281 34 20 chr2 14778541 14778687 -235909167 - MER103 DNA DNA -3 163 16 1263 189 120 49 chr2 14779611 14779805 -235908049 + MLT1B LTR MaLR 1 180 -210 216 0 0 0 chr2 14779805 14779829 -235908025 + (TC)n Simple_repeat Simple_repeat 2 25 0 1263 189 120 49 chr2 14779829 14779983 -235907871 + MLT1B LTR MaLR 180 374 -16 1405 205 7 40 chr2 14780431 14780728 -235907126 + AluJo SINE Alu 5 291 -21 21 0 0 0 chr2 14780729 14780750 -235907104 + AT_rich Low_complexity Low_complexity 1 21 0 285 165 10 136 chr2 14781286 14781389 -235906465 - HAL1 LINE L1 -112 2395 2306 228 279 58 53 chr2 14781399 14781589 -235906265 - L1ME3A LINE L1 -11 6159 5969 1448 232 161 76 chr2 14781607 14781689 -235906165 - L1MC5 LINE L1 -368 7593 7519 2274 167 21 5 chr2 14781689 14782072 -235905782 + MLT1B LTR MaLR 1 389 -1 1448 232 161 76 chr2 14782072 14782876 -235904978 - L1MC5 LINE L1 -442 7519 6582 378 0 0 0 chr2 14782876 14782918 -235904936 + (CA)n Simple_repeat Simple_repeat 2 43 0 1448 232 161 76 chr2 14782918 14783035 -235904819 - L1MC5 LINE L1 -1379 6582 6476 265 299 127 28 chr2 14783190 14783474 -235904380 - HAL1b LINE L1 -511 837 526 302 330 27 66 chr2 14783641 14783899 -235903955 - HAL1b LINE L1 -1046 302 55 263 187 44 0 chr2 14784279 14784370 -235903484 + (TATAA)n Simple_repeat Simple_repeat 3 97 0 328 278 68 12 chr2 14785015 14785177 -235902677 - HAL1 LINE L1 -164 2343 2173 684 255 132 38 chr2 14785337 14785678 -235902176 - HAL1 LINE L1 -1606 901 529 304 325 181 48 chr2 14785966 14786280 -235901574 - HAL1 LINE L1 -2135 372 17 1812 168 20 20 chr2 14786378 14786735 -235901119 + MLT1A1 LTR MaLR 4 360 -5 413 324 111 5 chr2 14787785 14787992 -235899862 + MIR SINE MIR 2 230 -32 2379 213 44 21 chr2 14787992 14788560 -235899294 + L1ME1 LINE L1 5581 6161 -5 249 128 0 0 chr2 14788586 14788625 -235899229 + MIR SINE MIR 218 256 -6 1397 200 23 58 chr2 14788789 14789134 -235898720 - MLT1B LTR MaLR 0 390 58 1118 298 45 13 chr2 14789157 14789539 -235898315 + LTR16C LTR ERVL 98 491 0 183 371 21 10 chr2 14789622 14789719 -235898135 - L2 LINE L2 -190 3082 2985 339 113 0 0 chr2 14789753 14789815 -235898039 + (GA)n Simple_repeat Simple_repeat 1 62 0 386 259 75 20 chr2 14790612 14790759 -235897095 + L3 LINE CR1 610 764 -813 3876 64 0 4 chr2 14790831 14791287 -235896567 - L1PA7 LINE L1 -13 6141 5688 3070 67 12 7 chr2 14791290 14791694 -235896160 + L1PA7 LINE L1 5254 5659 -495 302 283 81 0 chr2 14791769 14791868 -235895986 + L2 LINE L2 3202 3308 -5 2539 132 22 0 chr2 14791888 14792244 -235895610 - THE1B LTR MaLR 0 364 1 275 319 121 0 chr2 14792585 14792701 -235895153 - L2 LINE L2 -1 3271 3142 183 246 53 18 chr2 14792746 14792803 -235895051 + L2 LINE L2 3255 3313 0 279 206 83 33 chr2 14792826 14792921 -235894933 - MER5A DNA MER1_type -59 119 30 639 117 0 0 chr2 14793158 14793261 -235894593 + (TTCC)n Simple_repeat Simple_repeat 4 106 0 182 163 265 0 chr2 14793754 14793803 -235894051 + L2 LINE L2 3248 3309 -4 22 56 0 0 chr2 14794687 14794723 -235893131 + AT_rich Low_complexity Low_complexity 1 36 0 3963 220 117 31 chr2 14794779 14796055 -235891799 - Charlie7 DNA MER1_type -79 2533 1148 257 302 73 0 chr2 14796078 14796174 -235891680 - MER91C DNA MER1_type -23 117 15 606 251 40 60 chr2 14796181 14796432 -235891422 - Charlie7 DNA MER1_type -1462 1150 905 378 287 66 12 chr2 14796532 14796699 -235891155 - Charlie7 DNA MER1_type -2371 241 66 238 290 65 9 chr2 14796805 14796912 -235890942 - L1ME4a LINE L1 -6 6115 6003 1887 122 33 0 chr2 14796943 14797214 -235890640 - AluSg SINE Alu -30 280 1 264 167 0 0 chr2 14797235 14797283 -235890571 + (TG)n Simple_repeat Simple_repeat 1 48 0 966 264 5 0 chr2 14797312 14797505 -235890349 - MER58A DNA MER1_type -29 195 2 430 102 88 0 chr2 14797508 14797655 -235890199 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 403 57 119 16 chr2 14797663 14797967 -235889887 + (TA)n Simple_repeat Simple_repeat 1 335 0 * 695 85 45 28 chr2 14797944 14798120 -235889734 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 653 75 58 23 chr2 14798148 14798321 -235889533 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 251 182 227 0 chr2 14798339 14798405 -235889449 - MIR SINE MIR 0 262 182 1415 188 26 32 chr2 14798447 14798796 -235889058 + MLT1A1 LTR MaLR 20 428 0 497 223 120 65 chr2 14799018 14799202 -235888652 + LTR16C LTR ERVL 147 340 -151 2249 135 33 33 chr2 14800652 14801016 -235886838 + THE1B LTR MaLR 1 364 0 752 236 140 14 chr2 14802443 14802735 -235885119 - L1ME4a LINE L1 -252 5869 5541 2220 120 0 0 chr2 14802806 14803105 -235884749 - AluSx SINE Alu -13 299 1 1246 181 33 8 chr2 14804171 14804406 -235883448 - Tigger2a DNA MER2_type -2274 434 191 2205 132 0 0 chr2 14804406 14804717 -235883137 + AluSx SINE Alu 1 311 -1 1182 142 0 21 chr2 14804755 14804945 -235882909 - Tigger2a DNA MER2_type -225 209 24 473 217 151 60 chr2 14806158 14806191 -235881663 + Charlie8 DNA MER1_type 45 74 -256 2451 85 0 3 chr2 14806191 14806496 -235881358 + AluSg SINE Alu 1 304 -6 473 217 151 60 chr2 14806496 14806628 -235881226 + Charlie8 DNA MER1_type 74 225 -105 448 262 95 48 chr2 14806699 14806867 -235880987 + MIR3 SINE MIR 26 201 -7 820 165 8 0 chr2 14806958 14807091 -235880763 + AluJo SINE Alu 1 134 -178 196 343 205 24 chr2 14807387 14807553 -235880301 + MIR3 SINE MIR 13 208 0 197 297 16 31 chr2 14808352 14808416 -235879438 + L2 LINE L2 3210 3272 0 1230 243 101 42 chr2 14808943 14808981 -235878873 - MLT2B1 LTR ERVL 0 520 486 309 26 0 0 chr2 14808981 14809019 -235878835 + (TG)n Simple_repeat Simple_repeat 2 39 0 1230 243 101 42 chr2 14809019 14809436 -235878418 - MLT2B1 LTR ERVL -34 486 38 335 62 21 0 chr2 14809436 14809484 -235878370 - MER52C LTR ERV1 0 1278 1230 4712 200 93 15 chr2 14809489 14810647 -235877207 - MER52A LTR ERV1 -243 1512 202 319 190 0 0 chr2 14811244 14811302 -235876552 - MER52A LTR ERV1 -1697 58 1 243 191 0 0 chr2 14811302 14811342 -235876512 - MLT2B1 LTR ERVL -373 41 2 1859 124 9 53 chr2 14811876 14812198 -235875656 + AluJb SINE Alu 1 308 -4 396 320 48 52 chr2 14812199 14812430 -235875424 - MIR SINE MIR -12 250 21 377 335 72 0 chr2 14813321 14813488 -235874366 + MIR SINE MIR 48 226 -36 400 308 0 0 chr2 14813852 14813956 -235873898 + L2 LINE L2 3210 3313 0 596 288 68 27 chr2 14814134 14814353 -235873501 - MIR SINE MIR -2 260 33 1827 264 62 14 chr2 14815240 14815759 -235872095 + MLT1H1 LTR MaLR 12 555 0 297 360 22 11 chr2 14816846 14817024 -235870830 - MIR SINE MIR -64 198 19 285 207 74 58 chr2 14817402 14817523 -235870331 + L1ME4a LINE L1 5967 6089 -32 248 333 86 8 chr2 14817937 14818054 -235869800 + L2 LINE L2 2654 2779 -535 197 341 29 58 chr2 14818081 14818254 -235869600 + L2 LINE L2 2881 3048 -224 2449 100 0 0 chr2 14818257 14818566 -235869288 + AluSg SINE Alu 1 309 -1 368 303 49 21 chr2 14818680 14818822 -235869032 + L2 LINE L2 3122 3267 -5 2093 114 94 28 chr2 14818856 14819208 -235868646 + THE1C LTR MaLR 1 375 0 255 61 0 0 chr2 14820445 14820478 -235867376 + (TG)n Simple_repeat Simple_repeat 2 34 0 564 274 169 37 chr2 14820527 14820958 -235866896 - LTR33 LTR ERVL -8 513 26 385 281 118 58 chr2 14820981 14821395 -235866459 - L1MD2 LINE L1 -324 5845 5365 213 216 11 34 chr2 14821581 14821669 -235866185 + (TTATA)n Simple_repeat Simple_repeat 2 87 0 726 141 0 0 chr2 14821786 14821914 -235865940 + (TTCC)n Simple_repeat Simple_repeat 1 128 0 292 308 91 35 chr2 14821921 14822207 -235865647 - L1MD2 LINE L1 -1134 5012 4711 266 260 47 53 chr2 14822377 14822546 -235865308 + L1ME3A LINE L1 5757 5927 -242 2315 102 10 0 chr2 14822735 14823038 -235864816 - AluSq SINE Alu -3 310 5 1615 164 26 10 chr2 14823088 14823392 -235864462 - AluJb SINE Alu -3 309 1 321 284 95 35 chr2 14823708 14824211 -235863643 + L1ME LINE L1 5127 5669 -452 693 223 129 45 chr2 14824548 14824597 -235863257 - MER20 DNA MER1_type 0 219 176 2277 97 0 0 chr2 14824597 14824895 -235862959 - AluSg SINE Alu -12 298 1 693 223 129 45 chr2 14824895 14825047 -235862807 - MER20 DNA MER1_type -43 176 1 407 224 17 43 chr2 14825096 14825212 -235862642 - MLT1G1 LTR MaLR -482 113 1 396 269 21 0 chr2 14825212 14825305 -235862549 + MIR3 SINE MIR 62 156 -52 2572 154 46 2 chr2 14827033 14827443 -235860411 + MSTC LTR MaLR 1 428 0 205 200 0 22 chr2 14827568 14827613 -235860241 + (CTA)n Simple_repeat Simple_repeat 3 46 0 319 277 40 79 chr2 14827960 14828137 -235859717 - MIR SINE MIR -65 197 28 2123 141 35 3 chr2 14828394 14828734 -235859120 - L1MB1 LINE L1 0 6168 5818 813 131 0 0 chr2 14828739 14828869 -235858985 + (TCTCC)n Simple_repeat Simple_repeat 2 131 0 1663 182 0 67 chr2 14828869 14829198 -235858656 - AluJb SINE Alu -5 307 1 9034 165 37 81 chr2 14829198 14831443 -235856411 - L1MB1 LINE L1 -481 5831 3752 219 69 0 0 chr2 14831443 14831472 -235856382 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 9034 165 37 81 chr2 14831472 14832105 -235855749 - L1MB1 LINE L1 -2560 3752 3093 316 260 89 41 chr2 14832103 14832226 -235855628 + L1 LINE L1 2536 2664 -3482 * 1997 153 15 73 chr2 14832314 14832726 -235855128 - MLT1B LTR MaLR 0 390 3 238 322 0 0 chr2 14833033 14833092 -235854762 - L2 LINE L2 -13 3259 3201 230 317 60 30 chr2 14834779 14834962 -235852892 - MIR SINE MIR -6 256 20 446 280 14 21 chr2 14835421 14835564 -235852290 - MIR SINE MIR -65 197 56 320 336 53 0 chr2 14836090 14836203 -235851651 - MIR SINE MIR -112 150 32 294 50 0 0 chr2 14836251 14836291 -235851563 + (T)n Simple_repeat Simple_repeat 1 40 0 375 276 372 0 chr2 14836379 14836578 -235851276 - L3 LINE CR1 -182 1395 1123 222 254 15 45 chr2 14836904 14836971 -235850883 - L2 LINE L2 -5 3267 3203 1301 141 13 53 chr2 14837830 14838057 -235849797 - MER20 DNA MER1_type -1 218 1 1832 105 0 8 chr2 14838095 14838352 -235849502 - L1PB1 LINE L1 -459 5692 5438 3093 124 22 0 chr2 14838352 14838795 -235849059 + L1PB1 LINE L1 5675 6143 -8 2291 97 6 3 chr2 14839109 14839420 -235848434 + AluSx SINE Alu 1 312 0 875 281 62 11 chr2 14839834 14840161 -235847693 - L1MC4 LINE L1 -100 7708 7472 472 260 60 13 chr2 14840369 14840519 -235847335 - L1MC4 LINE L1 -1422 6620 6464 227 271 96 66 chr2 14840931 14841097 -235846757 + L2 LINE L2 1933 2103 -1211 410 246 79 8 chr2 14841219 14841345 -235846509 + MER103 DNA DNA 31 165 -1 331 294 119 0 chr2 14841668 14841811 -235846043 + MIR SINE MIR 50 209 -53 187 300 43 0 chr2 14841839 14841909 -235845945 - MIR SINE MIR -103 105 33 466 296 64 10 chr2 14841915 14842119 -235845735 + MIR SINE MIR 36 251 -11 396 241 145 28 chr2 14842757 14842902 -235844952 - MIR3 SINE MIR -30 178 17 1666 209 67 34 chr2 14843015 14843609 -235844245 - Charlie2 DNA MER1_type -25 2837 2224 544 299 23 73 chr2 14843678 14843939 -235843915 - Charlie2 DNA MER1_type -2533 249 2 255 378 51 47 chr2 14844121 14844396 -235843458 - L2 LINE L2 -49 3223 2948 448 279 58 41 chr2 14844657 14844829 -235843025 - MIR SINE MIR -74 188 14 288 246 0 14 chr2 14845123 14845192 -235842662 - L2 LINE L2 0 3313 3246 264 271 136 12 chr2 14845362 14845535 -235842319 - MIR SINE MIR -68 140 2 693 223 80 27 chr2 14845703 14845891 -235841963 + MER46C DNA MER2_type 139 336 -2 308 189 14 0 chr2 14845913 14845987 -235841867 + GA-rich Low_complexity Low_complexity 1 75 0 337 336 9 9 chr2 14846144 14846254 -235841600 - MIR SINE MIR -69 139 30 216 309 114 60 chr2 14847175 14847473 -235840381 + L2 LINE L2 2954 3267 -5 269 254 18 55 chr2 14848113 14848223 -235839631 + L2 LINE L2 3201 3306 -7 659 252 73 23 chr2 14848244 14848462 -235839392 - MIR SINE MIR -12 250 22 24 0 0 0 chr2 14849615 14849639 -235838215 + AT_rich Low_complexity Low_complexity 1 24 0 332 237 154 19 chr2 14850001 14850157 -235837697 + L1MCc LINE L1 24 200 -6223 1798 178 22 3 chr2 14850346 14850666 -235837188 + L1M2 LINE L1 5474 5799 -513 228 266 242 23 chr2 14850948 14851076 -235836778 + L2 LINE L2 3096 3251 -21 508 225 0 39 chr2 14851922 14852051 -235835803 - L1M4 LINE L1 -1145 5001 4878 2121 105 0 3 chr2 14852069 14852375 -235835479 + AluSx SINE Alu 1 305 0 3504 199 20 18 chr2 14852377 14853142 -235834712 - L1MB8 LINE L1 -16 6162 5397 521 308 0 64 chr2 14853144 14853316 -235834538 + FRAM SINE Alu 1 161 -15 2955 273 96 18 chr2 14853352 14853510 -235834344 - L1MB8 LINE L1 -746 5400 5256 1765 205 54 25 chr2 14853510 14853915 -235833939 - LTR52 LTR ERVL -3 418 2 2955 273 96 18 chr2 14853915 14855120 -235832734 - L1MB8 LINE L1 -890 5256 3897 1120 208 39 17 chr2 14855120 14855351 -235832503 - MER8 DNA MER2_type 0 239 4 2955 273 96 18 chr2 14855351 14855468 -235832386 - L1MB8 LINE L1 -2249 3897 3791 1503 239 66 18 chr2 14855468 14855908 -235831946 - MLT1C LTR MaLR 0 467 7 3502 256 48 33 chr2 14855914 14857281 -235830573 - L1MB8 LINE L1 -2351 3795 2409 1940 216 108 21 chr2 14857277 14857860 -235829994 - L1MEc LINE L1 -5223 1173 540 * 1871 209 12 0 chr2 14857863 14858208 -235829646 - MER68 LTR ERV1 -42 520 172 359 167 0 0 chr2 14858213 14858279 -235829575 - Charlie2 DNA MER1_type -912 1950 1885 713 198 30 42 chr2 14858281 14858448 -235829406 - MER58B DNA MER1_type 0 341 177 2133 142 3 0 chr2 14858448 14858759 -235829095 - AluSx SINE Alu 0 312 1 512 303 75 31 chr2 14859062 14859356 -235828498 - Charlie2 DNA MER1_type -2547 315 9 1732 141 53 11 chr2 14859672 14859955 -235827899 + AluSx SINE Alu 1 295 -17 467 214 0 0 chr2 14859990 14860079 -235827775 + MIR SINE MIR 101 189 -73 1885 183 102 10 chr2 14860101 14860494 -235827360 - MSTB1 LTR MaLR 0 432 4 579 278 7 0 chr2 14861189 14861340 -235826514 + MIR SINE MIR 111 262 0 259 274 12 60 chr2 14861335 14861419 -235826435 - L2 LINE L2 -2 3270 3191 * 192 304 38 121 chr2 14861904 14862193 -235825661 - L2 LINE L2 -202 3070 2806 344 285 16 32 chr2 14862547 14862670 -235825184 - MIR SINE MIR -63 145 25 436 295 115 16 chr2 14863360 14863543 -235824311 - MIR3 SINE MIR -5 203 3 264 340 10 10 chr2 14863773 14863873 -235823981 + MIR SINE MIR 32 131 -131 288 0 0 0 chr2 14864435 14864467 -235823387 + (CA)n Simple_repeat Simple_repeat 2 33 0 1355 174 24 96 chr2 14864551 14864884 -235822970 - MLT1B LTR MaLR -76 314 6 2671 112 11 11 chr2 14864884 14865259 -235822595 + THE1C LTR MaLR 1 375 0 9918 127 38 44 chr2 14865259 14866848 -235821006 + THE1C-int LTR MaLR 1 1580 0 2671 111 16 8 chr2 14866851 14867220 -235820634 + THE1C LTR MaLR 4 375 0 234 327 118 68 chr2 14868581 14868979 -235818875 + L2 LINE L2 2854 3271 -1 304 326 51 7 chr2 14869956 14870094 -235817760 + MIR SINE MIR 119 262 0 782 186 45 0 chr2 14871189 14871366 -235816488 - L1MA4 LINE L1 -3 6479 6295 2490 127 0 3 chr2 14871366 14871710 -235816144 + L1PB1 LINE L1 5789 6134 -17 2505 152 2 73 chr2 14871722 14872214 -235815640 - L1MA4 LINE L1 -178 6304 5848 * 8647 219 45 57 chr2 14872210 14875328 -235812526 - L1MA4 LINE L1 -743 5585 2544 6435 188 41 20 chr2 14875301 14875668 -235812186 - L1MA4 LINE L1 -4073 1255 897 * 1989 130 32 0 chr2 14875668 14875945 -235811909 - AluSx SINE Alu -26 286 1 6435 188 41 20 chr2 14875945 14877171 -235810683 - L1MA4 LINE L1 -4431 897 1 300 316 96 0 chr2 14877211 14877395 -235810459 + MIR SINE MIR 32 237 -25 2565 39 0 16 chr2 14877411 14877723 -235810131 - AluY SINE Alu -3 308 2 21 0 0 0 chr2 14877942 14877963 -235809891 + AT_rich Low_complexity Low_complexity 1 21 0 332 330 85 0 chr2 14878004 14878110 -235809744 + MIR SINE MIR 33 147 -61 2876 141 26 5 chr2 14879097 14879516 -235808338 - MSTA LTR MaLR 0 428 1 311 300 40 0 chr2 14879592 14879692 -235808162 + MIR3 SINE MIR 65 168 -40 280 269 21 32 chr2 14880664 14880757 -235807097 + L2 LINE L2 3192 3283 -30 497 329 79 22 chr2 14880956 14881233 -235806621 + L3 LINE CR1 1065 1357 -220 1214 148 124 5 chr2 14881245 14881462 -235806392 - MSTA LTR MaLR -50 378 136 226 290 43 0 chr2 14882245 14882314 -235805540 + MIR SINE MIR 23 94 -168 218 349 125 20 chr2 14883246 14883398 -235804456 + MIR SINE MIR 25 192 -70 367 235 160 45 chr2 14883521 14883592 -235804262 - MIR SINE MIR 0 262 201 2154 110 10 7 chr2 14883592 14883893 -235803961 - AluSg SINE Alu -8 302 1 367 235 160 45 chr2 14883893 14883982 -235803872 - MIR SINE MIR -61 201 124 2539 186 36 36 chr2 14883982 14884454 -235803400 + MER70A LTR ERVL 1 472 0 367 235 160 45 chr2 14884454 14884492 -235803362 - MIR SINE MIR -138 124 40 702 306 56 48 chr2 14886344 14887109 -235800745 + HAL1 LINE L1 998 1768 -739 382 288 38 76 chr2 14887281 14887465 -235800389 + HAL1b LINE L1 754 930 -418 519 315 25 49 chr2 14888501 14888704 -235799150 + MIR3 SINE MIR 6 203 -5 184 344 56 0 chr2 14889126 14889216 -235798638 + MIR3 SINE MIR 69 163 -45 * 238 230 194 71 chr2 14889198 14889326 -235798528 + MIR SINE MIR 17 158 -60 2002 153 172 3 chr2 14891652 14892018 -235795836 - MSTA LTR MaLR 0 428 1 2221 96 3 0 chr2 14892155 14892458 -235795396 + AluSx SINE Alu 1 304 0 226 345 86 7 chr2 14892577 14892716 -235795138 + MER5A DNA MER1_type 1 150 -39 4409 168 37 41 chr2 14893905 14894524 -235793330 + L1MB3 LINE L1 5276 5893 -290 1935 169 11 101 chr2 14894524 14894979 -235792875 - MLT2D LTR ERVL 0 414 1 4409 168 37 41 chr2 14894979 14895268 -235792586 + L1MB3 LINE L1 5893 6181 -2 251 284 257 0 chr2 14895623 14895771 -235792083 + MER5A DNA MER1_type 4 189 0 262 236 47 66 chr2 14896123 14896229 -235791625 - MIR SINE MIR -64 198 95 283 296 61 10 chr2 14896831 14896929 -235790925 - L2 LINE L2 0 3272 3170 223 273 0 0 chr2 14897080 14897124 -235790730 - MIR SINE MIR -127 81 38 747 226 38 85 chr2 14897788 14898023 -235789831 + MER58A DNA MER1_type 1 224 0 189 147 0 0 chr2 14898989 14899023 -235788831 + (GAAAA)n Simple_repeat Simple_repeat 5 38 0 321 253 152 10 chr2 14900524 14900623 -235787231 + MIR SINE MIR 81 193 -69 418 317 21 7 chr2 14901640 14901782 -235786072 - MIR SINE MIR -70 192 49 2369 230 69 84 chr2 14901929 14902447 -235785407 + MER69B DNA AcHobo 100 603 -1923 1935 144 7 7 chr2 14902447 14902752 -235785102 + AluSg SINE Alu 1 305 -5 2369 230 69 84 chr2 14902752 14903056 -235784798 + MER69B DNA AcHobo 603 910 -316 1143 271 76 87 chr2 14904548 14905264 -235782590 + L1ME3A LINE L1 5301 6008 -162 1922 135 14 3 chr2 14905264 14905553 -235782301 + AluSx SINE Alu 1 292 -20 1143 271 76 87 chr2 14905553 14905700 -235782154 + L1ME3A LINE L1 6008 6155 -15 306 0 0 0 chr2 14905740 14905774 -235782080 + (CA)n Simple_repeat Simple_repeat 1 34 0 3688 176 20 16 chr2 14906181 14906887 -235780967 - MER50 LTR ERV1 -23 711 3 206 234 21 0 chr2 14907991 14908038 -235779816 + MIR SINE MIR 144 191 -71 2228 190 69 9 chr2 14908555 14908992 -235778862 + MER31B LTR ERV1 4 466 0 234 0 0 0 chr2 14909190 14909216 -235778638 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2480 148 59 5 chr2 14909381 14909787 -235778067 + MSTA LTR MaLR 1 428 0 21 0 0 0 chr2 14909839 14909860 -235777994 + AT_rich Low_complexity Low_complexity 1 21 0 974 192 36 60 chr2 14910757 14911059 -235776795 + MER31A LTR ERV1 1 295 -190 854 159 62 11 chr2 14911144 14911320 -235776534 + MER93b LTR ERV1 189 373 0 413 109 0 0 chr2 14911320 14911375 -235776479 + MER31A LTR ERV1 360 414 -71 542 112 31 71 chr2 14911397 14911495 -235776359 - AluJb SINE Alu -179 133 40 2520 169 36 89 chr2 14911654 14912259 -235775595 + LTR35 LTR ERV1 1 573 -45 276 269 0 15 chr2 14912259 14912320 -235775534 + (TG)n Simple_repeat Simple_repeat 2 62 0 1581 214 0 0 chr2 14912320 14912614 -235775240 - AluJo SINE Alu -18 294 1 28 71 0 0 chr2 14913427 14913483 -235774371 + AT_rich Low_complexity Low_complexity 1 56 0 228 283 151 28 chr2 14913595 14913701 -235774153 + L2 LINE L2 3175 3293 -20 3058 137 28 8 chr2 14913704 14914200 -235773654 - Tigger3(Golem) DNA MER2_type -1 3028 2523 560 192 0 92 chr2 14914223 14914343 -235773511 - FRAM SINE Alu -31 145 37 212 314 57 0 chr2 14914443 14914513 -235773341 + L2 LINE L2 3145 3218 -54 6381 40 7 56 chr2 14914975 14915896 -235771958 + SVA Other Other 534 1386 0 790 285 71 38 chr2 14916451 14916687 -235771167 + L2 LINE L2 2910 3164 -149 2110 142 11 62 chr2 14916687 14917061 -235770793 - THE1A LTR MaLR 0 355 1 790 285 71 38 chr2 14917061 14917192 -235770662 + L2 LINE L2 3164 3289 -24 257 299 159 28 chr2 14917249 14917356 -235770498 + MIR SINE MIR 24 144 -64 324 188 0 0 chr2 14917585 14917654 -235770200 + GA-rich Low_complexity Low_complexity 2 70 0 332 290 114 19 chr2 14917696 14917958 -235769896 + L1M4c LINE L1 1309 1595 -4789 1938 140 3 10 chr2 14917958 14918251 -235769603 + AluSg SINE Alu 1 291 -19 1282 254 109 31 chr2 14918266 14919109 -235768745 + L1M4c LINE L1 2893 3971 -2411 2150 117 3 0 chr2 14919674 14919973 -235767881 + AluSx SINE Alu 1 300 -12 329 333 15 15 chr2 14921445 14921577 -235766277 - L2 LINE L2 -23 3290 3159 2095 118 0 3 chr2 14921587 14921876 -235765978 + AluSx SINE Alu 1 288 -24 627 251 80 25 chr2 14922282 14922481 -235765373 - MIR SINE MIR 0 262 53 210 383 25 0 chr2 14922572 14922653 -235765201 - L2 LINE L2 -682 2632 2550 1640 174 11 7 chr2 14922674 14922999 -235764855 + AluJb SINE Alu 1 326 0 1918 134 6 35 chr2 14923098 14923412 -235764442 + AluJo SINE Alu 1 305 -7 271 234 13 0 chr2 14923569 14923646 -235764208 + MIR SINE MIR 183 260 -2 2263 123 0 0 chr2 14923803 14924112 -235763742 - AluSx SINE Alu -1 311 3 210 369 18 27 chr2 14924254 14924365 -235763489 + L2 LINE L2 3155 3264 -8 21 0 0 0 chr2 14924586 14924607 -235763247 + AT_rich Low_complexity Low_complexity 1 21 0 307 265 0 0 chr2 14925033 14925113 -235762741 - MER5A DNA MER1_type -49 140 50 22 35 0 0 chr2 14925284 14925313 -235762541 + AT_rich Low_complexity Low_complexity 1 29 0 396 303 158 13 chr2 14925315 14925549 -235762305 + L1ME4a LINE L1 5548 5815 -306 1281 162 4 40 chr2 14925550 14925778 -235762076 + Tigger2a DNA MER2_type 2 221 -213 2133 65 0 43 chr2 14926021 14926299 -235761555 - AluSc SINE Alu -12 297 32 21 57 0 0 chr2 14926771 14926806 -235761048 + AT_rich Low_complexity Low_complexity 1 35 0 948 175 0 0 chr2 14926911 14927135 -235760719 + CT-rich Low_complexity Low_complexity 1 224 0 279 291 45 37 chr2 14927658 14927792 -235760062 + L1MEd LINE L1 43 177 -5942 481 281 55 47 chr2 14927845 14928223 -235759631 + L1MEd LINE L1 269 784 -5335 1116 185 12 0 chr2 14928332 14928505 -235759349 + FAM SINE Alu 1 175 0 206 133 0 44 chr2 14929298 14929343 -235758511 + (CATA)n Simple_repeat Simple_repeat 2 44 0 225 263 102 8 chr2 14930580 14930698 -235757156 + L1ME4a LINE L1 5980 6108 -13 476 83 0 0 chr2 14931299 14931359 -235756495 - MER1B DNA MER1_type 0 339 280 * 1348 173 0 0 chr2 14931355 14931557 -235756297 - MER1B DNA MER1_type -95 202 1 261 182 0 0 chr2 14931641 14931696 -235756158 + (TA)n Simple_repeat Simple_repeat 1 55 0 1848 144 37 17 chr2 14932017 14932315 -235755539 + AluJo SINE Alu 4 307 -5 235 300 100 36 chr2 14932783 14932893 -235754961 - L2 LINE L2 -5 3267 3151 337 261 0 0 chr2 14933392 14933461 -235754393 + L2 LINE L2 3240 3308 -5 191 59 0 29 chr2 14933472 14933506 -235754348 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 314 289 149 25 chr2 14933702 14933823 -235754031 + L2 LINE L2 3108 3243 -29 206 283 57 104 chr2 14934696 14934802 -235753052 + MIR SINE MIR 59 159 -103 188 333 107 28 chr2 14934903 14935080 -235752774 - L2 LINE L2 -163 3109 2919 1282 165 95 126 chr2 14935107 14935519 -235752335 - MER83 LTR ERV1 0 448 50 593 186 0 26 chr2 14935518 14935631 -235752223 - MER83 LTR ERV1 -338 110 1 * 192 77 0 0 chr2 14935730 14935756 -235752098 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 1156 250 88 59 chr2 14935932 14936494 -235751360 + L2 LINE L2 2727 3311 -2 1440 191 89 0 chr2 14936994 14937276 -235750578 - AluJb SINE Alu -5 307 1 476 295 8 0 chr2 14937764 14937893 -235749961 + MER94 DNA DNA 5 134 0 455 265 105 108 chr2 14938167 14938473 -235749381 + MLT1K LTR MaLR 242 546 -42 1046 160 0 0 chr2 14938603 14938759 -235749095 - AluJ SINE Alu -23 289 134 218 314 265 0 chr2 14938925 14939027 -235748827 - MIR SINE MIR -114 148 20 810 141 0 63 chr2 14939305 14939447 -235748407 - AluJ SINE Alu -169 133 1 186 43 0 0 chr2 14939592 14939615 -235748239 + (CAT)n Simple_repeat Simple_repeat 1 23 0 186 247 52 78 chr2 14939671 14939748 -235748106 - MIR SINE MIR -125 137 63 2243 92 0 33 chr2 14940012 14940318 -235747536 + AluSx SINE Alu 1 296 -16 23 33 0 0 chr2 14940630 14940660 -235747194 + AT_rich Low_complexity Low_complexity 1 30 0 2353 87 0 3 chr2 14941019 14941318 -235746536 + AluSq SINE Alu 1 298 -15 227 301 68 8 chr2 14941467 14941600 -235746254 + L1MC4 LINE L1 7899 8039 -3 2383 71 0 3 chr2 14941886 14942182 -235745672 - AluY SINE Alu -16 295 1 1160 174 4 51 chr2 14942282 14942517 -235745337 + AluJo SINE Alu 85 308 -4 286 303 90 6 chr2 14942579 14942757 -235745097 - L1MEd LINE L1 -5015 1104 912 851 283 123 13 chr2 14942835 14942940 -235744914 - L1MEd LINE L1 -5290 829 737 306 0 0 0 chr2 14942940 14942974 -235744880 + (TG)n Simple_repeat Simple_repeat 2 35 0 851 283 123 13 chr2 14942974 14943250 -235744604 - L1MEd LINE L1 -5382 737 406 271 380 0 9 chr2 14944966 14945074 -235742780 + MIR SINE MIR 26 132 -130 460 169 36 0 chr2 14945119 14945185 -235742669 + MER67A LTR ERV1 15 83 -460 1771 211 118 47 chr2 14945185 14945776 -235742078 + MER67B LTR ERV1 1 633 -28 235 339 8 62 chr2 14945900 14946030 -235741824 + MER5A DNA MER1_type 15 137 -52 1993 143 3 13 chr2 14946053 14946360 -235741494 - AluSx SINE Alu -8 304 1 2157 220 10 44 chr2 14946627 14947146 -235740708 + LTR31 LTR ERV1 104 604 -15 3272 64 59 7 chr2 14947291 14947712 -235740142 - MLT2A1 LTR ERVL 0 444 2 267 186 0 51 chr2 14947743 14947802 -235740052 + MLT1H1 LTR MaLR 53 108 -447 1551 212 70 68 chr2 14948199 14948295 -235739559 + MER49 LTR ERV1 4 98 -825 2163 99 0 3 chr2 14948295 14948599 -235739255 + AluSx SINE Alu 1 303 0 1551 212 70 68 chr2 14948599 14949120 -235738734 + MER49 LTR ERV1 98 806 -117 1687 148 83 0 chr2 14949120 14949275 -235738579 - AluJb SINE Alu -12 300 159 221 0 0 33 chr2 14949275 14949305 -235738549 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1687 148 83 0 chr2 14949305 14949426 -235738428 - AluJb SINE Alu -153 159 1 1551 212 70 68 chr2 14949426 14949545 -235738309 + MER49 LTR ERV1 806 923 0 288 295 92 35 chr2 14949825 14949895 -235737959 + L2 LINE L2 1637 1702 -1612 1744 169 10 10 chr2 14949895 14950197 -235737657 + AluJo SINE Alu 1 302 -10 288 295 92 35 chr2 14950197 14950353 -235737501 + L2 LINE L2 1702 1876 -1438 408 268 197 0 chr2 14950544 14950686 -235737168 + MER5A DNA MER1_type 17 186 -3 267 328 151 65 chr2 14950686 14951267 -235736587 + L2 LINE L2 2126 2761 -553 795 183 30 71 chr2 14951267 14951464 -235736390 + MER5A DNA MER1_type 1 189 0 267 328 151 65 chr2 14951464 14951479 -235736375 + L2 LINE L2 2761 2773 -541 2082 207 131 20 chr2 14951601 14952089 -235735765 + MLT1F LTR MaLR 1 542 0 485 318 15 108 chr2 14952096 14952495 -235735359 + L2 LINE L2 2907 3268 -4 249 121 0 0 chr2 14952638 14952671 -235735183 + MLT1G1 LTR MaLR 1 33 -562 4520 139 20 20 chr2 14952671 14953402 -235734452 + ERVL-D LTR ERVL 4724 5454 -310 281 176 29 0 chr2 14953407 14953475 -235734379 + (TATG)n Simple_repeat Simple_repeat 3 72 0 896 147 0 15 chr2 14953523 14953659 -235734195 - AluJo SINE Alu -178 134 1 1778 128 30 23 chr2 14953659 14953964 -235733890 + ERVL-D LTR ERVL 5447 5753 -11 1946 159 18 95 chr2 14953968 14954039 -235733815 + MLT2D LTR ERVL 1 76 -338 2188 110 7 13 chr2 14954039 14954347 -235733507 + AluSq SINE Alu 1 306 -7 1946 159 18 95 chr2 14954347 14954401 -235733453 + MLT2D LTR ERVL 76 133 -281 1755 150 11 25 chr2 14954401 14954687 -235733167 + AluJb SINE Alu 11 292 -20 1946 159 18 95 chr2 14954687 14955001 -235732853 + MLT2D LTR ERVL 133 407 -7 1864 163 3 3 chr2 14955058 14955352 -235732502 + AluJo SINE Alu 3 296 -16 783 260 218 25 chr2 14955360 14955796 -235732058 + MLT1G3 LTR MaLR 1 595 0 2022 237 35 51 chr2 14956942 14957490 -235730364 + MLT1F LTR MaLR 1 539 -3 1648 264 57 22 chr2 14957497 14957952 -235729902 - MLT1J LTR MaLR -2 509 39 1118 261 89 44 chr2 14958087 14958615 -235729239 + MLT1H1 LTR MaLR 3 554 -1 200 361 59 30 chr2 14958617 14958786 -235729068 - L2 LINE L2 -295 2977 2804 1465 179 13 42 chr2 14959898 14960008 -235727846 - AluJb SINE Alu -14 298 186 1848 73 0 45 chr2 14960008 14960255 -235727599 + AluY SINE Alu 60 295 -16 1465 179 13 42 chr2 14960255 14960451 -235727403 - AluJb SINE Alu -126 186 1 1287 199 61 101 chr2 14960495 14960871 -235726983 + MLT1A1 LTR MaLR 1 361 -4 2318 80 0 3 chr2 14961205 14961491 -235726363 - AluSx SINE Alu -27 285 1 588 131 180 0 chr2 14961513 14961635 -235726219 - L1MB7 LINE L1 0 6184 6041 1830 153 14 4 chr2 14963002 14963283 -235724571 - AluJo SINE Alu -28 284 1 216 211 11 158 chr2 14963422 14963517 -235724337 + MER91C DNA MER1_type 30 110 -30 995 241 36 5 chr2 14963600 14963824 -235724030 - MIR SINE MIR -26 236 6 942 124 0 0 chr2 14963825 14963962 -235723892 - AluSg/x SINE Alu -9 303 167 2306 80 10 0 chr2 14963970 14964147 -235723707 - AluSg SINE Alu -5 305 122 279 0 0 0 chr2 14964147 14964178 -235723676 + (TG)n Simple_repeat Simple_repeat 2 32 0 2306 80 10 0 chr2 14964178 14964302 -235723552 - AluSg SINE Alu -188 122 1 299 265 83 61 chr2 14964405 14964537 -235723317 + MIR SINE MIR 51 185 -77 1855 101 0 4 chr2 14966168 14966416 -235721438 - AluSx SINE Alu -32 280 34 2203 107 10 10 chr2 14967023 14967331 -235720523 + AluY SINE Alu 2 309 -2 497 259 145 6 chr2 14968039 14968246 -235719608 - MIR SINE MIR -24 238 6 1788 168 3 7 chr2 14969105 14969402 -235718452 - AluJo SINE Alu -4 308 13 22 0 0 0 chr2 14971335 14971357 -235716497 + AT_rich Low_complexity Low_complexity 1 22 0 497 365 109 8 chr2 14971601 14971996 -235715858 + L3 LINE CR1 1098 1532 -45 2179 95 0 47 chr2 14972497 14972840 -235715014 - AluSx SINE Alu 0 312 1 291 276 125 30 chr2 14973070 14973302 -235714552 + L1 LINE L1 4763 5016 -1130 3063 181 41 5 chr2 14973400 14973964 -235713890 - MER21B-int LTR ERV1 -2914 3844 3261 912 54 0 0 chr2 14973964 14974075 -235713779 - AluY SINE Alu 0 311 201 1418 193 16 0 chr2 14974078 14974321 -235713533 - MER21B-int LTR ERV1 -3944 247 1 302 256 24 12 chr2 14974371 14974453 -235713401 - MER21B LTR ERV1 -54 809 727 1995 173 106 3 chr2 14974525 14974894 -235712960 - MER21B LTR ERV1 -128 735 329 1943 119 12 44 chr2 14975919 14976238 -235711616 - AluSx SINE Alu -3 309 1 1097 305 72 4 chr2 14977852 14978443 -235709411 - L2 LINE L2 -9 3304 2659 1571 249 150 43 chr2 14978445 14979159 -235708695 - L2 LINE L2 -1121 2193 1404 933 233 89 21 chr2 14979713 14979949 -235707905 - MIR SINE MIR 0 262 11 795 190 6 62 chr2 14980047 14980226 -235707628 - FRAM SINE Alu -14 162 1 1462 183 119 4 chr2 14980814 14981082 -235706772 - AluJb SINE Alu -13 299 1 489 114 14 142 chr2 14981416 14981474 -235706380 - L1MB5 LINE L1 0 6174 6138 2122 114 7 3 chr2 14981474 14981771 -235706083 + AluSx SINE Alu 1 298 -14 489 114 14 142 chr2 14981771 14981846 -235706008 - L1MB5 LINE L1 -36 6138 6055 909 196 35 23 chr2 14981897 14982070 -235705784 - FAM SINE Alu 0 175 1 187 380 42 0 chr2 14982178 14982249 -235705605 - L2 LINE L2 -6 3307 3234 201 234 19 131 chr2 14983010 14983117 -235704737 + MER5A DNA MER1_type 46 140 -49 1717 181 16 0 chr2 14983155 14983458 -235704396 - AluJo SINE Alu -4 308 1 1127 198 54 7 chr2 14983458 14983736 -235704118 - L1M4 LINE L1 -948 5198 4908 6709 60 9 42 chr2 14984109 14985414 -235702440 - SVA Other Other -520 1386 432 5817 75 27 18 chr2 14985428 14986282 -235701572 - SVA Other Other -520 866 5 25 0 0 0 chr2 14986406 14986431 -235701423 + AT_rich Low_complexity Low_complexity 1 25 0 1969 108 63 7 chr2 14987061 14987348 -235700506 - AluSq SINE Alu -10 303 1 827 211 128 40 chr2 14987682 14988026 -235699828 + MLT1A1 LTR MaLR 1 396 0 311 227 30 0 chr2 14988661 14988727 -235699127 + L2 LINE L2 3227 3294 -19 207 0 0 0 chr2 14989112 14989135 -235698719 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1946 112 18 0 chr2 14989138 14989290 -235698564 - AluSx SINE Alu -30 282 121 225 0 0 0 chr2 14989290 14989315 -235698539 + (TG)n Simple_repeat Simple_repeat 2 26 0 1946 112 18 0 chr2 14989315 14989439 -235698415 - AluSx SINE Alu -191 121 1 520 238 69 48 chr2 14989453 14989642 -235698212 - MIR SINE MIR 0 262 70 268 307 92 26 chr2 14989781 14989934 -235697920 + MIR SINE MIR 100 262 0 494 218 123 52 chr2 14989971 14990182 -235697672 - MIR SINE MIR -4 258 33 21 0 0 0 chr2 14990330 14990351 -235697503 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 14990701 14990739 -235697115 + AT_rich Low_complexity Low_complexity 1 38 0 1508 179 61 7 chr2 14991552 14991848 -235696006 - MER52A LTR ERV1 0 1755 1444 * 2222 204 131 14 chr2 14991834 14992339 -235695515 - MER52A LTR ERV1 -990 765 202 268 247 72 10 chr2 14992684 14992781 -235695073 - MER52A LTR ERV1 -1652 103 1 254 229 71 0 chr2 14993228 14993298 -235694556 - MIR SINE MIR -112 150 76 23 0 0 0 chr2 14993380 14993403 -235694451 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 14994030 14994060 -235693794 + AT_rich Low_complexity Low_complexity 1 30 0 1982 120 20 23 chr2 14994534 14994833 -235693021 - AluSq SINE Alu -15 298 1 2176 135 0 3 chr2 14994877 14995181 -235692673 - AluSx SINE Alu -9 303 1 1054 110 30 0 chr2 14995378 14995542 -235692312 - L1MB3 LINE L1 -1 6182 6014 565 235 80 44 chr2 14997305 14997530 -235690324 + L1M4 LINE L1 2174 2407 -3739 2227 104 116 0 chr2 14997599 14997935 -235689919 - THE1C LTR MaLR 0 375 1 2331 220 103 37 chr2 14997942 14998668 -235689186 + L1ME2 LINE L1 5381 6154 -10 350 206 71 52 chr2 15002367 15002522 -235685332 - L1MC4 LINE L1 -2 8040 7883 24 67 0 0 chr2 15003814 15003859 -235683995 + AT_rich Low_complexity Low_complexity 1 45 0 1829 132 0 63 chr2 15004775 15005130 -235682724 - AluJb SINE Alu 0 312 1 300 299 123 13 chr2 15005625 15005779 -235682075 - MIR3 SINE MIR -17 191 21 285 262 0 0 chr2 15006169 15006230 -235681624 + MLT1J LTR MaLR 148 208 -303 977 191 0 11 chr2 15007095 15007278 -235680576 - AluJb SINE Alu -1 311 131 342 335 132 0 chr2 15007773 15007955 -235679899 - L1ME LINE L1 -391 5730 5525 297 265 10 39 chr2 15008837 15008939 -235678915 - MER5A DNA MER1_type -90 99 1 611 228 111 19 chr2 15009113 15009275 -235678579 - MER5B DNA MER1_type -1 177 1 264 257 50 50 chr2 15009526 15009627 -235678227 - MARNA DNA Mariner -73 513 413 709 285 40 5 chr2 15011834 15012065 -235675789 - MIR SINE MIR 0 262 24 212 226 0 38 chr2 15012251 15012304 -235675550 - MIR SINE MIR -55 153 103 2194 130 0 6 chr2 15012327 15012642 -235675212 - AluSq SINE Alu 0 313 1 2006 153 0 13 chr2 15012769 15013083 -235674771 - AluJo SINE Alu -2 310 1 1024 220 29 4 chr2 15014460 15014705 -235673149 + L1M4 LINE L1 2479 2729 -3417 1868 201 7 14 chr2 15014708 15015145 -235672709 + L1M4 LINE L1 2813 3246 -2900 274 281 0 12 chr2 15015146 15015228 -235672626 - MIR SINE MIR -150 112 32 377 265 52 22 chr2 15015237 15015373 -235672481 + L2 LINE L2 3132 3271 -1 257 202 67 45 chr2 15016976 15017065 -235670789 - MLT1J LTR MaLR -5 506 416 767 267 34 103 chr2 15017112 15017557 -235670297 - MLT1J LTR MaLR -93 418 5 351 290 99 59 chr2 15017634 15017906 -235669948 - L2 LINE L2 0 3272 2990 859 248 191 51 chr2 15018061 15018578 -235669276 - MLT1K LTR MaLR 0 615 2 273 289 67 30 chr2 15018621 15018756 -235669098 - MIR3 SINE MIR -68 140 1 1366 159 133 30 chr2 15018883 15019153 -235668701 + AluJb SINE Alu 1 298 -14 2372 95 0 0 chr2 15019620 15019924 -235667930 - AluSx SINE Alu -8 304 1 2688 172 42 0 chr2 15019954 15020455 -235667399 + L1MB3 LINE L1 5622 6143 -40 2257 112 0 3 chr2 15020455 15020760 -235667094 - AluSx SINE Alu -8 304 1 537 118 12 0 chr2 15021093 15021178 -235666676 + L1MB8 LINE L1 6087 6172 -6 1609 184 8 15 chr2 15021517 15021784 -235666070 + AluJb SINE Alu 2 266 -46 838 26 26 52 chr2 15021811 15021965 -235665889 + (GGAA)n Simple_repeat Simple_repeat 3 152 0 1012 161 0 0 chr2 15022469 15022624 -235665230 + AluSg/x SINE Alu 134 288 -24 377 319 73 39 chr2 15023500 15023732 -235664122 - L3 LINE CR1 -352 1225 986 2006 141 10 7 chr2 15024752 15025049 -235662805 - AluSx SINE Alu -14 298 1 2495 70 0 22 chr2 15025049 15025365 -235662489 - AluY SINE Alu -2 309 1 23 0 0 0 chr2 15025375 15025398 -235662456 + AT_rich Low_complexity Low_complexity 1 23 0 368 295 38 24 chr2 15025940 15026134 -235661720 - MIR SINE MIR -58 150 3 257 311 107 0 chr2 15026606 15026728 -235661126 + MIR SINE MIR 47 181 -81 250 366 18 6 chr2 15028868 15029032 -235658822 - L2 LINE L2 -559 2755 2590 396 272 0 10 chr2 15029234 15029337 -235658517 + MER5A DNA MER1_type 60 161 -28 196 292 133 9 chr2 15029404 15029517 -235658337 + L2 LINE L2 3144 3270 -2 716 253 50 0 chr2 15030274 15030472 -235657382 - MER3 DNA MER1_type 0 209 2 1971 126 0 14 chr2 15030639 15030955 -235656899 + AluY SINE Alu 1 312 0 418 218 18 55 chr2 15031529 15031639 -235656215 - LTR67 LTR ERVL -449 108 3 1006 336 22 24 chr2 15031752 15032293 -235655561 + L2 LINE L2 2317 2856 -458 207 333 57 38 chr2 15032342 15032501 -235655353 + L2 LINE L2 2916 3077 -195 497 298 37 37 chr2 15032717 15032932 -235654922 + MIR SINE MIR 47 261 -1 974 250 28 20 chr2 15033112 15033364 -235654490 - MIR SINE MIR -8 254 1 776 263 18 28 chr2 15034164 15034381 -235653473 - MIR SINE MIR -41 221 7 2275 80 0 10 chr2 15036280 15036569 -235651285 - AluY SINE Alu -11 300 15 2373 205 104 4 chr2 15037001 15037548 -235650306 + L1MB5 LINE L1 5573 6174 0 398 229 83 10 chr2 15040063 15040159 -235647695 - L2 LINE L2 0 3272 3170 197 179 71 18 chr2 15040158 15040214 -235647640 + MIR SINE MIR 199 257 -5 * 213 392 40 20 chr2 15041442 15041641 -235646213 - L2 LINE L2 -244 3028 2826 207 0 0 0 chr2 15043072 15043095 -235644759 + (T)n Simple_repeat Simple_repeat 1 23 0 2437 82 0 13 chr2 15043113 15043428 -235644426 - AluY SINE Alu 0 311 1 2610 148 19 2 chr2 15043430 15043897 -235643957 - L1M3 LINE L1 -345 5823 5349 309 286 67 9 chr2 15043898 15044003 -235643851 - MIR3 SINE MIR -88 120 10 276 277 40 113 chr2 15044552 15044729 -235643125 + MIR SINE MIR 5 168 -40 207 218 18 73 chr2 15044751 15044806 -235643048 - L2 LINE L2 -17 3255 3204 1737 209 72 59 chr2 15044897 15044943 -235642911 + MLT1F LTR MaLR 1 45 -497 2349 100 3 0 chr2 15044943 15045243 -235642611 - AluSp SINE Alu -12 301 1 1737 209 72 59 chr2 15045243 15045722 -235642132 + MLT1F LTR MaLR 45 533 -9 271 311 52 37 chr2 15046760 15046895 -235640959 + MIR SINE MIR 35 171 -91 1409 192 32 3 chr2 15047390 15047702 -235640152 + L1MB8 LINE L1 5852 6172 -6 262 284 53 11 chr2 15047815 15047910 -235639944 - MIR3 SINE MIR -50 158 60 397 305 29 29 chr2 15048276 15048450 -235639404 - MIR3 SINE MIR -23 185 12 312 298 153 15 chr2 15048855 15048986 -235638868 + MIR SINE MIR 44 192 -70 2079 127 7 0 chr2 15049290 15049582 -235638272 - AluSq SINE Alu -19 294 1 2260 107 24 0 chr2 15050029 15050327 -235637527 + AluSx SINE Alu 1 305 -7 280 328 40 56 chr2 15050547 15050672 -235637182 - MIR SINE MIR -66 142 20 936 160 33 144 chr2 15051211 15051517 -235636337 + LTR35 LTR ERV1 296 567 -51 225 226 0 0 chr2 15051517 15051570 -235636284 + (TG)n Simple_repeat Simple_repeat 1 53 0 1613 214 0 0 chr2 15051584 15051878 -235635976 - AluJo SINE Alu -18 294 1 28 71 0 0 chr2 15052691 15052747 -235635107 + AT_rich Low_complexity Low_complexity 1 56 0 235 283 151 28 chr2 15052859 15052965 -235634889 + L2 LINE L2 3175 3293 -20 2804 137 28 8 chr2 15052968 15053464 -235634390 - Tigger3b DNA MER2_type 0 1231 726 1379 216 0 51 chr2 15053487 15053783 -235634071 - AluJo SINE Alu -31 281 1 2447 148 81 6 chr2 15053794 15054313 -235633541 - Tigger3b DNA MER2_type -656 575 18 2227 122 0 0 chr2 15054364 15054667 -235633187 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr2 15054800 15054821 -235633033 + AT_rich Low_complexity Low_complexity 1 21 0 2376 101 0 16 chr2 15054830 15055148 -235632706 + AluSp SINE Alu 1 313 0 1621 154 0 93 chr2 15055329 15055653 -235632201 + AluJo SINE Alu 1 294 -8 499 225 141 31 chr2 15055876 15056067 -235631787 + MLT2C1 LTR ERVL 13 224 -173 853 139 0 53 chr2 15056074 15056225 -235631629 + FLAM_C SINE Alu 1 143 0 234 273 8 61 chr2 15056318 15056450 -235631404 + MLT2C1 LTR ERVL 336 460 -4 1501 193 30 10 chr2 15056966 15057267 -235630587 + MLT1F1 LTR MaLR 85 391 -176 377 289 65 107 chr2 15057262 15057384 -235630470 + MLT1G LTR MaLR 52 178 -377 * 2282 94 7 0 chr2 15057384 15057681 -235630173 + AluSp SINE Alu 1 299 -14 377 289 65 107 chr2 15057681 15058084 -235629770 + MLT1G LTR MaLR 178 555 0 288 281 161 45 chr2 15058528 15058707 -235629147 - MIR SINE MIR -51 211 14 291 290 113 61 chr2 15059051 15059282 -235628572 + MIR SINE MIR 14 256 -6 337 113 62 1 chr2 15059525 15059609 -235628245 + Alu SINE Alu 242 290 -12 549 216 134 47 chr2 15060584 15060755 -235627099 - MIR SINE MIR -29 233 48 237 261 23 11 chr2 15060945 15061033 -235626821 - L1MC4 LINE L1 -14 8028 7940 280 227 9 18 chr2 15061107 15061217 -235626637 + (CATATA)n Simple_repeat Simple_repeat 2 110 0 475 189 0 0 chr2 15061221 15061316 -235626538 - L1MC4 LINE L1 -126 7916 7822 2372 101 0 0 chr2 15061325 15061631 -235626223 - AluSg SINE Alu -4 306 1 316 294 39 20 chr2 15061852 15062005 -235625849 + MLT1I LTR MaLR 93 248 -161 186 133 0 0 chr2 15062940 15062970 -235624884 + (CA)n Simple_repeat Simple_repeat 2 31 0 674 205 25 56 chr2 15063271 15063432 -235624422 + MIR SINE MIR 17 172 -90 1693 156 7 18 chr2 15063442 15063724 -235624130 - AluJb SINE Alu -27 285 7 2654 89 18 8 chr2 15063724 15064117 -235623737 + THE1C-int LTR MaLR 1184 1580 0 1822 143 54 40 chr2 15064117 15064487 -235623367 + THE1C LTR MaLR 1 375 0 222 250 200 0 chr2 15064490 15064570 -235623284 + MIR SINE MIR 163 258 -4 249 316 113 38 chr2 15064647 15064780 -235623074 - MIR SINE MIR -81 181 39 433 236 161 35 chr2 15065061 15065235 -235622619 - MIR SINE MIR -1 261 66 1809 185 0 0 chr2 15066478 15066764 -235621090 - AluJb SINE Alu -26 286 1 21 0 0 0 chr2 15067525 15067546 -235620308 + AT_rich Low_complexity Low_complexity 1 21 0 369 275 47 62 chr2 15067927 15068120 -235619734 - MIR SINE MIR -5 257 68 265 323 116 12 chr2 15068834 15069085 -235618769 + L1MC4a LINE L1 5633 5909 -1899 428 304 111 37 chr2 15070053 15070431 -235617423 + L1MB5 LINE L1 4976 5381 -765 236 239 0 0 chr2 15070521 15070567 -235617287 + L1MB5 LINE L1 5589 5634 -2174 731 239 86 14 chr2 15070585 15070794 -235617060 - MIR SINE MIR -37 225 2 2233 140 0 19 chr2 15071585 15071957 -235615897 - MER47A DNA MER2_type -1 365 1 25 31 0 0 chr2 15072070 15072102 -235615752 + AT_rich Low_complexity Low_complexity 1 32 0 632 151 0 0 chr2 15073072 15073178 -235614676 + L1MB5 LINE L1 6069 6174 0 21 36 0 0 chr2 15073226 15073254 -235614600 + AT_rich Low_complexity Low_complexity 1 28 0 734 167 45 15 chr2 15073381 15073513 -235614341 - AluJo SINE Alu -176 136 1 28 86 0 0 chr2 15073639 15073709 -235614145 + AT_rich Low_complexity Low_complexity 1 70 0 28 0 0 0 chr2 15074459 15074487 -235613367 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 15074617 15074647 -235613207 + AT_rich Low_complexity Low_complexity 1 30 0 236 365 48 7 chr2 15075417 15075562 -235612292 - L2 LINE L2 -3 3310 3160 304 316 110 37 chr2 15075622 15076020 -235611834 - L2 LINE L2 -250 3022 2596 21 36 0 0 chr2 15076299 15076327 -235611527 + AT_rich Low_complexity Low_complexity 1 28 0 243 305 11 74 chr2 15077374 15077469 -235610385 + MIR SINE MIR 51 139 -69 209 385 33 11 chr2 15079380 15079471 -235608383 - L2 LINE L2 -187 3085 2993 249 306 93 0 chr2 15079706 15079814 -235608040 + L2 LINE L2 2219 2336 -978 2095 82 45 0 chr2 15080217 15080484 -235607370 - AluY SINE Alu -16 295 17 1853 159 0 10 chr2 15080772 15081068 -235606786 - AluJb SINE Alu -19 293 1 566 261 37 5 chr2 15081192 15081410 -235606444 - L1M4 LINE L1 -1538 4608 4384 1786 237 16 20 chr2 15081535 15082084 -235605770 + L1ME3A LINE L1 5416 5962 -208 557 263 17 17 chr2 15082328 15082503 -235605351 + LTR16C LTR ERVL 287 461 -30 207 238 0 24 chr2 15082637 15082679 -235605175 - MIR SINE MIR -137 71 31 227 233 233 0 chr2 15082776 15082879 -235604975 + L1ME2 LINE L1 53 179 -6217 542 125 0 0 chr2 15082891 15082971 -235604883 - AluJ/FRAM SINE Alu -11 301 222 960 278 147 8 chr2 15082971 15083461 -235604393 + L1ME2 LINE L1 191 748 -5648 * 1213 250 32 22 chr2 15083458 15083862 -235603992 + L1MA9 LINE L1 5867 6274 -38 915 249 71 85 chr2 15083881 15083966 -235603888 + L1ME2 LINE L1 738 823 -5573 2280 87 14 3 chr2 15083966 15084255 -235603599 + AluSg SINE Alu 1 292 -18 915 249 71 85 chr2 15084255 15085410 -235602444 + L1ME2 LINE L1 823 1960 -4436 1648 224 73 29 chr2 15085477 15087086 -235600768 + L1ME2 LINE L1 4282 6063 -170 510 233 23 40 chr2 15087122 15087296 -235600558 + L1MA10 LINE L1 6004 6333 -1 24 0 0 0 chr2 15087305 15087329 -235600525 + AT_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr2 15088927 15088967 -235598887 + AT_rich Low_complexity Low_complexity 1 40 0 347 274 335 6 chr2 15089183 15089362 -235598492 - MIR SINE MIR -6 256 19 25 0 0 0 chr2 15090476 15090501 -235597353 + AT_rich Low_complexity Low_complexity 1 25 0 198 71 0 0 chr2 15091224 15091252 -235596602 + (TG)n Simple_repeat Simple_repeat 2 29 0 1652 159 51 4 chr2 15091254 15091564 -235596290 - AluJo SINE Alu 0 323 1 961 268 208 34 chr2 15092759 15093771 -235594083 + HAL1 LINE L1 1243 2430 -77 324 221 19 91 chr2 15093877 15094031 -235593823 - L1MC4 LINE L1 -408 7634 7492 320 292 31 0 chr2 15094012 15094108 -235593746 - L1MC5 LINE L1 -550 7411 7313 * 471 289 93 32 chr2 15094094 15094405 -235593449 - L1MC4a LINE L1 -393 7415 7086 244 230 27 27 chr2 15094499 15094573 -235593281 + GA-rich Low_complexity Low_complexity 2 75 0 289 289 0 13 chr2 15094577 15094653 -235593201 - MIR3 SINE MIR -49 159 85 231 325 0 0 chr2 15096076 15096153 -235591701 + MIR SINE MIR 124 200 -62 1872 133 32 52 chr2 15096495 15096842 -235591012 - MER2 DNA MER2_type -1 343 4 324 0 0 0 chr2 15096998 15097034 -235590820 + (TG)n Simple_repeat Simple_repeat 2 37 0 900 144 0 0 chr2 15097042 15097174 -235590680 - FLAM_C SINE Alu -1 132 1 863 255 19 14 chr2 15097183 15097391 -235590463 - MIR SINE MIR -25 237 29 2198 122 0 6 chr2 15097634 15097946 -235589908 - AluSx SINE Alu -2 310 1 1430 272 67 34 chr2 15098857 15100254 -235587600 + L1MC/D LINE L1 4278 5734 -787 324 202 157 0 chr2 15100279 15100368 -235587486 + MER3 DNA MER1_type 107 209 0 229 250 11 33 chr2 15100718 15100810 -235587044 + L1ME LINE L1 5410 5499 -671 1979 186 110 22 chr2 15100876 15101338 -235586516 - MLT1D LTR MaLR -2 503 1 282 315 38 33 chr2 15101615 15101799 -235586055 - L1MCa LINE L1 -746 1744 1407 455 320 110 14 chr2 15101800 15102019 -235585835 + MIR SINE MIR 2 241 -21 733 159 0 16 chr2 15102023 15102149 -235585705 + FLAM_C SINE Alu 1 124 -19 367 366 41 5 chr2 15102209 15102403 -235585451 - L1MCa LINE L1 -4797 1513 1313 943 296 102 66 chr2 15102449 15103322 -235584532 - L1MCa LINE L1 -4903 1216 313 398 326 40 43 chr2 15104367 15104643 -235583211 - L1MCa LINE L1 -5831 288 14 1017 298 69 6 chr2 15105304 15105666 -235582188 + MLT1I LTR MaLR 25 409 0 1840 209 28 43 chr2 15105839 15106371 -235581483 + MER65B LTR ERV1 1 524 -7 384 376 110 19 chr2 15106396 15106715 -235581139 - L2 LINE L2 0 3272 2925 188 396 38 0 chr2 15106775 15106934 -235580920 - L2 LINE L2 -463 2851 2687 286 297 92 46 chr2 15107462 15107657 -235580197 - L3 LINE CR1 -10 1567 1364 2405 86 0 0 chr2 15107796 15108097 -235579757 + AluSx SINE Alu 1 301 -11 615 297 36 10 chr2 15108193 15108388 -235579466 + MIR SINE MIR 8 207 -55 216 0 0 0 chr2 15109219 15109243 -235578611 + (GA)n Simple_repeat Simple_repeat 2 25 0 2298 101 0 7 chr2 15109655 15109963 -235577891 + AluSx SINE Alu 1 306 -6 195 230 0 150 chr2 15111251 15111351 -235576503 + L2 LINE L2 3223 3307 -6 265 299 133 77 chr2 15111566 15111971 -235575883 - L2 LINE L2 -14 3258 2831 225 0 0 0 chr2 15112469 15112494 -235575360 + (TG)n Simple_repeat Simple_repeat 2 26 0 246 81 0 0 chr2 15112523 15112560 -235575294 + (TG)n Simple_repeat Simple_repeat 2 38 0 774 214 7 7 chr2 15112561 15112715 -235575139 - FAM SINE Alu -17 158 5 2260 107 0 3 chr2 15112845 15113145 -235574709 - AluY SINE Alu -12 299 1 2853 159 56 16 chr2 15114952 15115524 -235572330 - L1MC1 LINE L1 -6 6327 5733 603 176 114 0 chr2 15115529 15115660 -235572194 + L1MC2 LINE L1 6189 6334 -10 225 231 119 90 chr2 15116228 15116362 -235571492 + MIR3 SINE MIR 41 178 -30 34 0 0 0 chr2 15116605 15116639 -235571215 + AT_rich Low_complexity Low_complexity 1 34 0 236 393 8 33 chr2 15116836 15116958 -235570896 - MIR3 SINE MIR -75 133 15 208 239 0 0 chr2 15117665 15117711 -235570143 + (CAGAGA)n Simple_repeat Simple_repeat 3 48 0 272 292 35 35 chr2 15117889 15118033 -235569821 + MER5B DNA MER1_type 29 172 -6 197 281 171 91 chr2 15118421 15118631 -235569223 + MIR SINE MIR 19 245 -17 181 305 76 47 chr2 15118936 15119172 -235568682 + L2 LINE L2 1935 2177 -1137 532 320 75 9 chr2 15119250 15119478 -235568376 - HAL1 LINE L1 -880 1627 1385 580 275 101 27 chr2 15119488 15119935 -235567919 - HAL1 LINE L1 -1173 1334 855 359 294 122 20 chr2 15119937 15120182 -235567672 - HAL1 LINE L1 -1708 799 530 915 172 43 48 chr2 15121287 15121496 -235566358 + MER3 DNA MER1_type 2 209 0 1277 188 0 52 chr2 15121581 15121831 -235566023 + AluJo SINE Alu 1 237 -75 2167 114 17 0 chr2 15121895 15122192 -235565662 + AluY SINE Alu 1 302 -9 258 243 43 0 chr2 15122318 15122388 -235565466 + MIR3 SINE MIR 133 205 -3 188 324 0 15 chr2 15122622 15122690 -235565164 - L2 LINE L2 -526 2788 2722 204 125 0 0 chr2 15123495 15123527 -235564327 + (ATG)n Simple_repeat Simple_repeat 2 33 0 620 299 60 20 chr2 15123578 15123829 -235564025 - MIR SINE MIR 0 262 2 1976 138 7 7 chr2 15123942 15124240 -235563614 - AluSx SINE Alu -14 298 1 422 328 15 8 chr2 15124577 15124708 -235563146 + L2 LINE L2 3182 3313 0 760 284 34 21 chr2 15126295 15126531 -235561323 + MIR SINE MIR 10 248 -14 1356 157 12 94 chr2 15126948 15127267 -235560587 + AluJo SINE Alu 1 293 -19 203 206 49 39 chr2 15127346 15127448 -235560406 + (CAAGA)n Simple_repeat Simple_repeat 5 107 0 815 228 86 39 chr2 15128543 15128775 -235559079 - MIR SINE MIR -10 252 10 252 276 14 145 chr2 15129814 15129959 -235557895 + L2 LINE L2 3040 3165 -107 219 296 0 28 chr2 15130030 15130101 -235557753 + (TGGA)n Simple_repeat Simple_repeat 4 72 0 540 234 24 0 chr2 15130336 15130460 -235557394 + FLAM_A SINE Alu 1 127 -6 21 0 0 0 chr2 15130886 15130907 -235556947 + AT_rich Low_complexity Low_complexity 1 21 0 1503 266 49 67 chr2 15131538 15132147 -235555707 + L1MEc LINE L1 11 605 -5791 2234 86 3 25 chr2 15132147 15132462 -235555392 + AluY SINE Alu 1 308 -3 1503 266 49 67 chr2 15132462 15132612 -235555242 + L1MEc LINE L1 605 756 -5640 44111 37 1 4 chr2 15132634 15138801 -235549053 + L1PA3 LINE L1 2 6154 -1 2339 247 74 43 chr2 15138826 15140167 -235547687 + L1MEc LINE L1 758 2219 -4177 302 253 21 77 chr2 15140227 15140421 -235547433 + L1MEc LINE L1 2178 2360 -4036 572 266 148 5 chr2 15140573 15140776 -235547078 + L1ME3A LINE L1 5937 6168 -2 1135 199 77 106 chr2 15140921 15141297 -235546557 - MLT1A1 LTR MaLR 0 365 1 228 227 162 3 chr2 15141540 15141621 -235546233 - MIR SINE MIR -56 152 72 32 0 0 0 chr2 15142354 15142386 -235545468 + AT_rich Low_complexity Low_complexity 1 32 0 195 306 16 16 chr2 15143518 15143580 -235544274 + L2 LINE L2 2998 3059 -213 309 109 0 0 chr2 15144158 15144204 -235543650 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 1594 183 7 4 chr2 15144205 15144484 -235543370 - AluJo SINE Alu -32 280 1 1485 161 45 3 chr2 15145112 15145403 -235542451 + L1MB2 LINE L1 5855 6157 -14 2393 52 24 0 chr2 15145451 15145738 -235542116 + AluY SINE Alu 5 298 -13 2441 83 0 0 chr2 15146904 15147206 -235540648 - AluSc SINE Alu -3 306 5 558 126 27 45 chr2 15147480 15147591 -235540263 + L1MD3 LINE L1 7730 7838 -157 2342 78 10 0 chr2 15148043 15148336 -235539518 - AluSx SINE Alu -16 296 1 437 248 44 0 chr2 15148507 15148620 -235539234 + L1MD3 LINE L1 7838 7955 -40 596 243 71 12 chr2 15148711 15148880 -235538974 - MIR SINE MIR 0 262 84 431 256 34 8 chr2 15149591 15149708 -235538146 - L2 LINE L2 0 3313 3194 680 254 68 42 chr2 15149720 15149984 -235537870 - L2 LINE L2 0 3313 3043 513 286 136 14 chr2 15149998 15150278 -235537576 - L2 LINE L2 -144 3169 2856 2294 167 49 5 chr2 15151451 15151859 -235535995 + MSTB LTR MaLR 1 426 0 2186 82 53 0 chr2 15152630 15152912 -235534942 - AluY SINE Alu -14 297 1 201 287 357 6 chr2 15153029 15153186 -235534668 + MIR SINE MIR 50 261 -1 27 29 0 0 chr2 15154224 15154258 -235533596 + AT_rich Low_complexity Low_complexity 1 34 0 404 223 65 50 chr2 15155318 15155457 -235532397 - L2 LINE L2 0 3313 3173 259 270 0 139 chr2 15155597 15155712 -235532142 + L2 LINE L2 3174 3272 0 353 289 155 56 chr2 15155740 15156114 -235531740 - L2 LINE L2 -907 2407 1997 1707 192 0 3 chr2 15156124 15156416 -235531438 + AluJo SINE Alu 1 291 -21 534 319 111 28 chr2 15156417 15156887 -235530967 + L2 LINE L2 725 1233 -2081 533 236 70 79 chr2 15156893 15157236 -235530618 + L1MC5 LINE L1 7556 7895 -66 910 290 112 39 chr2 15157280 15157869 -235529985 + L2 LINE L2 1218 1849 -1465 426 274 105 26 chr2 15158051 15158204 -235529650 + MIR SINE MIR 6 170 -92 366 266 62 0 chr2 15158278 15158391 -235529463 - L2 LINE L2 -5 3308 3189 180 353 163 41 chr2 15158445 15158666 -235529188 + L2 LINE L2 3021 3268 -4 27 29 0 0 chr2 15158934 15158968 -235528886 + AT_rich Low_complexity Low_complexity 1 34 0 1886 173 3 0 chr2 15159790 15160085 -235527769 + AluJb SINE Alu 2 297 -15 2420 50 0 0 chr2 15162231 15162548 -235525306 - L1P LINE L1 -2891 3255 2939 4680 54 0 3 chr2 15162548 15163133 -235524721 + L1PA5 LINE L1 5565 6152 -2 462 271 9 0 chr2 15163579 15163686 -235524168 - L2 LINE L2 -2 3311 3204 1397 120 0 10 chr2 15163906 15164114 -235523740 + AluSq SINE Alu 96 301 -12 1351 236 52 35 chr2 15164750 15165118 -235522736 + MLT1A2 LTR MaLR 1 374 0 438 220 207 7 chr2 15165215 15165365 -235522489 + LTR41 LTR ERVL 8 187 -586 387 276 91 47 chr2 15165809 15166063 -235521791 + LTR41 LTR ERVL 503 767 -6 2075 113 3 0 chr2 15167680 15167994 -235519860 - AluSx SINE Alu 0 315 1 22 80 0 0 chr2 15169060 15169110 -235518744 + AT_rich Low_complexity Low_complexity 1 50 0 2135 114 24 0 chr2 15169574 15169872 -235517982 + AluSg SINE Alu 1 305 -5 2071 96 35 0 chr2 15170402 15170684 -235517170 - AluSx SINE Alu -19 293 2 239 139 0 0 chr2 15170921 15170964 -235516890 - L1ME4a LINE L1 -1 6120 6078 204 228 152 25 chr2 15172970 15173049 -235514805 + L2 LINE L2 3184 3272 0 1708 197 3 3 chr2 15173192 15173496 -235514358 + AluJo SINE Alu 1 304 -8 27 0 0 0 chr2 15173561 15173588 -235514266 + AT_rich Low_complexity Low_complexity 1 27 0 2586 188 12 2 chr2 15173951 15174447 -235513407 - L1MB5 LINE L1 -8 6166 5666 241 213 0 0 chr2 15174700 15174747 -235513107 + MER39 LTR ERV1 1 47 -660 2119 130 76 80 chr2 15174799 15175283 -235512571 + MER39 LTR ERV1 1 554 -153 1672 146 52 4 chr2 15175283 15175551 -235512303 - AluJb SINE Alu -31 281 1 2119 130 76 80 chr2 15175551 15175705 -235512149 + MER39 LTR ERV1 554 707 0 657 142 0 9 chr2 15175952 15176058 -235511796 + MER39 LTR ERV1 598 702 -5 262 321 160 0 chr2 15176298 15176404 -235511450 - L2 LINE L2 -2 3270 3148 861 70 86 0 chr2 15177565 15177693 -235510161 - MER85 DNA T2_type 0 139 1 21 0 0 0 chr2 15178415 15178436 -235509418 + AT_rich Low_complexity Low_complexity 1 21 0 182 345 0 18 chr2 15178669 15178724 -235509130 + MIR SINE MIR 54 107 -155 993 220 72 5 chr2 15180487 15180710 -235507144 + MER8 DNA MER2_type 2 239 0 224 295 13 0 chr2 15182606 15182684 -235505170 + GA-rich Low_complexity Low_complexity 2 80 0 379 279 74 0 chr2 15183086 15183208 -235504646 + Charlie8 DNA MER1_type 136 266 -2151 301 254 0 0 chr2 15183289 15183352 -235504502 + Charlie8 DNA MER1_type 2343 2405 -12 275 357 39 31 chr2 15183760 15183889 -235503965 - MIR3 SINE MIR -53 155 26 27 29 0 0 chr2 15184171 15184205 -235503649 + AT_rich Low_complexity Low_complexity 1 34 0 1011 225 76 86 chr2 15184217 15184588 -235503266 + MER39 LTR ERV1 1 536 -171 2539 71 0 0 chr2 15184588 15184899 -235502955 + AluY SINE Alu 1 311 0 1011 225 76 86 chr2 15184899 15185070 -235502784 + MER39 LTR ERV1 536 707 0 410 220 85 51 chr2 15185246 15185423 -235502431 - L1MC5 LINE L1 -64 7897 7715 1945 148 0 14 chr2 15185595 15185892 -235501962 - AluJb SINE Alu -17 295 3 1802 155 57 35 chr2 15186068 15186435 -235501419 + THE1C LTR MaLR 1 375 0 2075 139 3 0 chr2 15186519 15186820 -235501034 + AluSx SINE Alu 1 302 -10 2036 116 23 0 chr2 15186956 15187257 -235500597 - AluSx SINE Alu -4 308 1 335 323 32 38 chr2 15187382 15187540 -235500314 + MIR SINE MIR 57 213 -49 387 203 138 89 chr2 15188374 15188665 -235499189 + L1MC5 LINE L1 7223 7527 -434 3206 191 46 10 chr2 15188876 15189207 -235498647 + L1MB8 LINE L1 5444 5762 -416 378 91 0 0 chr2 15189207 15189262 -235498592 + (CA)n Simple_repeat Simple_repeat 2 56 0 3206 191 46 10 chr2 15189262 15189631 -235498223 + L1MB8 LINE L1 5762 6169 -9 343 216 10 10 chr2 15189711 15189813 -235498041 + GA-rich Low_complexity Low_complexity 4 105 0 885 340 135 36 chr2 15189881 15190872 -235496982 - L2 LINE L2 -29 3284 2196 24 0 0 70 chr2 15191471 15191514 -235496340 + AT_rich Low_complexity Low_complexity 1 40 0 4577 88 22 12 chr2 15191558 15191717 -235496137 + L1PA13 LINE L1 5482 5638 -525 1552 118 226 47 chr2 15191717 15191880 -235495974 + MSTA LTR MaLR 1 133 -295 192 40 0 0 chr2 15191880 15191905 -235495949 + (TC)n Simple_repeat Simple_repeat 1 25 0 1552 118 226 47 chr2 15191905 15192063 -235495791 + MSTA LTR MaLR 133 261 -167 2074 138 10 3 chr2 15192063 15192361 -235495493 - AluSx SINE Alu -12 300 1 1552 118 226 47 chr2 15192361 15192401 -235495453 + MSTA LTR MaLR 261 428 0 4577 88 22 12 chr2 15192401 15192908 -235494946 + L1PA13 LINE L1 5638 6155 -8 323 236 22 79 chr2 15192749 15192927 -235494927 + L1PA2 LINE L1 5988 6155 0 379 228 0 142 chr2 15193476 15193603 -235494251 - L2 LINE L2 -7 3306 3198 342 0 0 0 chr2 15193636 15193674 -235494180 + (CA)n Simple_repeat Simple_repeat 1 38 0 2255 58 51 7 chr2 15193787 15194079 -235493775 + AluY SINE Alu 1 305 -6 1958 106 73 0 chr2 15194153 15194428 -235493426 + AluY SINE Alu 1 295 -16 899 10 0 0 chr2 15194718 15194818 -235493036 - AluYa5/8 SINE Alu -7 303 204 1095 155 0 0 chr2 15194902 15195063 -235492791 - AluJb SINE Alu -18 294 134 5406 129 36 26 chr2 15195484 15196423 -235491431 - Tigger3b DNA MER2_type 0 1231 284 319 231 0 15 chr2 15196423 15196488 -235491366 - MER2 DNA MER2_type 0 345 282 * 442 287 0 0 chr2 15196463 15196557 -235491297 - MER8 DNA MER2_type -60 179 86 239 256 16 74 chr2 15197072 15197193 -235490661 - L1ME3 LINE L1 -8 6154 6041 1302 165 30 0 chr2 15197842 15198079 -235489775 + L1M4 LINE L1 5485 5728 -446 202 318 0 11 chr2 15199167 15199255 -235488599 + A-rich Low_complexity Low_complexity 4 90 0 480 285 66 41 chr2 15199395 15199788 -235488066 + HAL1b LINE L1 231 633 -715 1451 252 150 4 chr2 15200022 15200474 -235487380 - L2 LINE L2 -1405 1909 1392 196 240 0 20 chr2 15200677 15200727 -235487127 - MIR SINE MIR -55 207 159 542 179 5 122 chr2 15201657 15201853 -235486001 - L1MC4 LINE L1 -4 8038 7866 1739 103 4 0 chr2 15201855 15202089 -235485765 + AluSq SINE Alu 1 235 -78 217 211 18 18 chr2 15202405 15202462 -235485392 + MIR SINE MIR 98 154 -108 2394 73 0 0 chr2 15202992 15203281 -235484573 - AluSg SINE Alu -21 289 1 311 306 150 17 chr2 15203347 15203527 -235484327 + MLT1I LTR MaLR 3 206 -203 248 243 108 0 chr2 15203753 15203827 -235484027 + L2 LINE L2 3232 3313 0 578 249 76 35 chr2 15203870 15204067 -235483787 + MIR SINE MIR 48 252 -10 1844 187 70 41 chr2 15205545 15206004 -235481850 + MLT1D LTR MaLR 1 472 -33 288 263 17 25 chr2 15206615 15206733 -235481121 + L1MC5 LINE L1 7329 7445 -516 1566 194 10 17 chr2 15206840 15207129 -235480725 + AluJo SINE Alu 1 287 -25 1041 207 37 43 chr2 15207140 15207439 -235480415 + L1MC5 LINE L1 7617 7913 -48 34 84 0 0 chr2 15207771 15207854 -235480000 + AT_rich Low_complexity Low_complexity 1 83 0 231 287 81 11 chr2 15208275 15208362 -235479492 - L2 LINE L2 -23 3249 3157 530 146 125 0 chr2 15208496 15208592 -235479262 + AluJb SINE Alu 81 188 -124 368 179 51 0 chr2 15208592 15208670 -235479184 + AluS SINE Alu 221 302 0 320 267 109 63 chr2 15209215 15209436 -235478418 + L1ME LINE L1 4466 4696 -1450 2032 109 3 3 chr2 15209594 15209877 -235477977 + AluSx SINE Alu 21 303 -9 230 239 132 13 chr2 15209877 15210036 -235477818 + L1ME LINE L1 5212 5389 -757 227 284 31 0 chr2 15210085 15210157 -235477697 + L1ME LINE L1 5521 5586 -535 970 97 0 19 chr2 15210270 15210424 -235477430 - L1PA15 LINE L1 -1 6164 6014 1129 203 166 66 chr2 15210758 15211138 -235476716 - Tigger5 DNA MER2_type 0 2323 1 2281 115 25 27 chr2 15211804 15212169 -235475685 - THE1B LTR MaLR 0 364 1 1604 144 20 52 chr2 15212563 15212869 -235474985 - AluJb SINE Alu -7 305 10 463 143 13 0 chr2 15212876 15212953 -235474901 - MER5A DNA MER1_type -111 78 1 1544 212 0 14 chr2 15213253 15213550 -235474304 + AluJb SINE Alu 1 293 -19 1180 195 113 13 chr2 15213645 15213947 -235473907 - MER58B DNA MER1_type -1 340 9 245 337 163 12 chr2 15213986 15214152 -235473702 + MIR SINE MIR 66 256 -6 214 367 31 20 chr2 15214205 15214303 -235473551 - L2 LINE L2 -27 3245 3147 607 219 0 31 chr2 15214565 15214693 -235473161 - L2 LINE L2 -1 3312 3189 194 306 59 24 chr2 15214740 15214825 -235473029 - L2 LINE L2 0 3272 3185 982 207 32 18 chr2 15214899 15215116 -235472738 + MER58A DNA MER1_type 1 220 -4 442 359 141 23 chr2 15215118 15215773 -235472081 - L2 LINE L2 -433 2881 2150 1173 151 80 0 chr2 15215843 15216082 -235471772 - Tigger2 DNA MER2_type 0 2718 2461 1833 123 14 11 chr2 15216113 15216398 -235471456 - Tigger2 DNA MER2_type -1940 778 493 2229 140 9 3 chr2 15216398 15216740 -235471114 - MER2 DNA MER2_type 0 344 1 2006 142 0 0 chr2 15216765 15217079 -235470775 + AluSx SINE Alu 1 314 0 264 266 11 53 chr2 15217899 15217993 -235469861 + MER5B DNA MER1_type 89 178 0 367 318 8 32 chr2 15218490 15218616 -235469238 - MIR SINE MIR -70 138 16 21 0 0 0 chr2 15218616 15218637 -235469217 + AT_rich Low_complexity Low_complexity 1 21 0 253 236 0 0 chr2 15218657 15218712 -235469142 + L1MB7 LINE L1 6070 6124 -60 243 346 0 0 chr2 15220219 15220323 -235467531 + A-rich Low_complexity Low_complexity 1 104 0 206 267 56 67 chr2 15220374 15220464 -235467390 - L2 LINE L2 -41 3231 3143 1217 243 13 71 chr2 15220481 15220860 -235466994 - MLT1A1 LTR MaLR -8 357 1 373 174 41 6 chr2 15221474 15221646 -235466208 + (TA)n Simple_repeat Simple_repeat 1 178 0 2138 116 3 0 chr2 15221719 15222013 -235465841 + AluSx SINE Alu 1 295 -17 244 229 0 0 chr2 15222014 15222075 -235465779 + L1MC4 LINE L1 6652 6712 -1330 1792 162 26 0 chr2 15222351 15222654 -235465200 + AluJb SINE Alu 1 311 -1 28 0 0 0 chr2 15223186 15223214 -235464640 + AT_rich Low_complexity Low_complexity 1 28 0 253 257 71 7 chr2 15223460 15223600 -235464254 + L1MEd LINE L1 893 1041 -5078 1826 248 75 40 chr2 15223769 15224500 -235463354 + HAL1 LINE L1 1151 1907 -600 313 180 0 0 chr2 15224502 15224552 -235463302 + 5S rRNA rRNA 2 51 -70 282 225 54 18 chr2 15224592 15224703 -235463151 + HAL1 LINE L1 1954 2068 -439 1084 266 88 23 chr2 15224722 15225211 -235462643 + L2 LINE L2 2784 3313 0 482 270 74 47 chr2 15225293 15225344 -235462510 + HAL1 LINE L1 2108 2156 -351 2555 60 0 0 chr2 15225344 15225644 -235462210 + AluY SINE Alu 4 303 -8 482 270 74 47 chr2 15225644 15225888 -235461966 + HAL1 LINE L1 2156 2411 -96 23 54 0 0 chr2 15225943 15225980 -235461874 + AT_rich Low_complexity Low_complexity 1 37 0 1268 271 95 26 chr2 15226040 15226703 -235461151 + L1ME3 LINE L1 5258 5966 -196 483 18 0 0 chr2 15226807 15226863 -235460991 + (TG)n Simple_repeat Simple_repeat 2 57 0 256 276 213 8 chr2 15227309 15227436 -235460418 - MIR SINE MIR -6 256 104 2597 231 30 26 chr2 15227812 15228275 -235459579 + L1ME2 LINE L1 5429 5898 -266 1709 170 57 33 chr2 15228275 15228373 -235459481 + MER2 DNA MER2_type 1 95 -249 2181 112 0 3 chr2 15228373 15228720 -235459134 + AluY SINE Alu 1 311 0 1709 170 57 33 chr2 15228720 15228957 -235458897 + MER2 DNA MER2_type 95 344 0 2597 231 30 26 chr2 15228957 15229216 -235458638 + L1ME2 LINE L1 5898 6154 -10 331 320 84 39 chr2 15229255 15229458 -235458396 + L1MC4 LINE L1 7829 8040 -2 709 256 34 94 chr2 15230246 15230629 -235457225 + MER34 LTR ERV1 1 360 -182 342 233 9 8 chr2 15230629 15230857 -235456997 + AluJo SINE Alu 1 297 -5 564 200 37 63 chr2 15230859 15231049 -235456805 + MER34 LTR ERV1 353 537 -5 909 194 36 16 chr2 15231092 15231339 -235456515 + MER33 DNA MER1_type 45 296 -28 614 190 15 103 chr2 15231533 15231728 -235456126 + MER5B DNA MER1_type 1 178 0 255 103 0 0 chr2 15232991 15233030 -235454824 + (CA)n Simple_repeat Simple_repeat 2 40 0 235 303 79 0 chr2 15233127 15233203 -235454651 - L2 LINE L2 -1882 1432 1351 259 346 99 49 chr2 15233460 15233784 -235454070 + L2 LINE L2 2523 2862 -452 2334 97 3 6 chr2 15233846 15234157 -235453697 - AluSx SINE Alu -2 310 1 244 293 186 55 chr2 15234166 15234419 -235453435 + L2 LINE L2 2933 3218 -54 300 226 39 122 chr2 15234688 15234869 -235452985 + L1MC4 LINE L1 7864 8029 -13 349 206 71 52 chr2 15238326 15238481 -235449373 - L1MC4 LINE L1 -2 8040 7883 24 67 0 0 chr2 15239773 15239818 -235448036 + AT_rich Low_complexity Low_complexity 1 45 0 1829 129 0 63 chr2 15240734 15241093 -235446761 - AluJb SINE Alu 0 312 1 354 303 121 12 chr2 15241588 15241753 -235446101 - MIR3 SINE MIR -17 191 9 275 262 0 0 chr2 15242132 15242193 -235445661 + MLT1J LTR MaLR 148 208 -303 975 200 0 0 chr2 15243058 15243238 -235444616 - AluJb SINE Alu -2 310 131 226 235 20 0 chr2 15243324 15243375 -235444479 - L1ME4a LINE L1 -92 6029 5978 326 349 125 0 chr2 15243733 15243925 -235443929 - L1ME4a LINE L1 -391 5730 5515 343 255 10 39 chr2 15244797 15244899 -235442955 - MER5A DNA MER1_type -90 99 1 637 228 111 19 chr2 15245073 15245235 -235442619 - MER5B DNA MER1_type -1 177 1 240 257 50 50 chr2 15245486 15245587 -235442267 - MARNA DNA Mariner -73 513 413 803 276 49 11 chr2 15247794 15248049 -235439805 - MIR SINE MIR 0 262 3 241 206 29 73 chr2 15248211 15248279 -235439575 - MIR SINE MIR -55 153 89 2228 130 0 6 chr2 15248287 15248602 -235439252 - AluSq SINE Alu 0 313 1 2069 150 0 13 chr2 15248729 15249043 -235438811 - AluJo SINE Alu -2 310 1 199 284 68 14 chr2 15249942 15250016 -235437838 + L2 LINE L2 3187 3264 -8 981 224 29 4 chr2 15250420 15250665 -235437189 + L1M4 LINE L1 2479 2729 -3417 1791 208 7 14 chr2 15250668 15251105 -235436749 + L1M4 LINE L1 2813 3246 -2900 307 281 0 12 chr2 15251106 15251188 -235436666 - MIR SINE MIR -150 112 32 435 265 52 22 chr2 15251197 15251333 -235436521 + L2 LINE L2 3132 3271 -1 228 202 67 45 chr2 15252936 15253025 -235434829 - MLT1J LTR MaLR -5 506 416 673 269 34 99 chr2 15253079 15253522 -235434332 - MLT1J LTR MaLR -93 418 5 450 290 99 59 chr2 15253599 15253871 -235433983 - L2 LINE L2 0 3272 2990 745 246 194 52 chr2 15254039 15254543 -235433311 - MLT1K LTR MaLR -11 577 2 328 289 67 30 chr2 15254586 15254721 -235433133 - MIR3 SINE MIR -68 140 1 1389 159 133 30 chr2 15254848 15255118 -235432736 + AluJb SINE Alu 1 298 -14 2382 96 0 0 chr2 15255585 15255888 -235431966 - AluSx SINE Alu -9 303 1 2582 170 42 0 chr2 15255918 15256419 -235431435 + L1MB3 LINE L1 5622 6143 -40 2283 112 0 3 chr2 15256419 15256724 -235431130 - AluSx SINE Alu -8 304 1 521 118 12 0 chr2 15257056 15257141 -235430713 + L1MB8 LINE L1 6087 6172 -6 1633 184 8 15 chr2 15257480 15257747 -235430107 + AluJb SINE Alu 2 266 -46 838 26 26 52 chr2 15257774 15257928 -235429926 + (GGAA)n Simple_repeat Simple_repeat 3 152 0 1025 161 0 0 chr2 15258432 15258587 -235429267 + AluSg/x SINE Alu 132 286 -24 493 293 138 39 chr2 15259413 15259696 -235428158 - L3 LINE CR1 -281 1296 986 2011 149 10 7 chr2 15260711 15261013 -235426841 - AluSx SINE Alu -9 303 1 2474 73 0 22 chr2 15261013 15261326 -235426528 - AluY SINE Alu -5 306 1 23 0 0 0 chr2 15261336 15261359 -235426495 + AT_rich Low_complexity Low_complexity 1 23 0 448 307 81 20 chr2 15261857 15262095 -235425759 - MIR SINE MIR -9 253 3 320 312 122 21 chr2 15262550 15262739 -235425115 + MIR SINE MIR 34 241 -21 325 366 18 6 chr2 15264826 15264990 -235422864 - L2 LINE L2 -559 2755 2590 436 296 2 15 chr2 15265148 15265323 -235422531 + MER5A DNA MER1_type 7 178 0 248 274 142 18 chr2 15265362 15265475 -235422379 + L2 LINE L2 3144 3270 -2 746 248 50 0 chr2 15266234 15266432 -235421422 - MER3 DNA MER1_type 0 209 2 2002 123 0 14 chr2 15266599 15266915 -235420939 + AluY SINE Alu 1 312 0 393 218 18 55 chr2 15267489 15267599 -235420255 - LTR67 LTR ERVL -449 108 3 1193 340 45 56 chr2 15267631 15268626 -235419228 + L2 LINE L2 2242 3225 -47 606 297 37 37 chr2 15268650 15268892 -235418962 + MIR SINE MIR 20 261 -1 1063 254 28 20 chr2 15269072 15269324 -235418530 - MIR SINE MIR -8 254 1 422 249 67 83 chr2 15269424 15269617 -235418237 + L1ME4a LINE L1 5930 6119 -2 861 258 18 28 chr2 15270130 15270347 -235417507 - MIR SINE MIR -41 221 7 225 342 88 44 chr2 15270865 15270979 -235416875 - L3b LINE CR1 -24 1559 1441 2294 82 0 10 chr2 15272243 15272535 -235415319 - AluY SINE Alu -8 303 15 180 282 56 28 chr2 15272750 15272821 -235415033 + MIR SINE MIR 118 190 -72 2211 207 104 4 chr2 15272967 15273514 -235414340 + L1MB5 LINE L1 5573 6174 0 214 341 76 8 chr2 15275645 15275806 -235412048 - MIR SINE MIR -50 212 40 440 218 99 10 chr2 15276028 15276129 -235411725 - L2 LINE L2 0 3313 3204 224 179 71 18 chr2 15276123 15276179 -235411675 + MIR SINE MIR 199 257 -5 * 193 392 40 20 chr2 15277407 15277606 -235410248 - L2 LINE L2 -244 3028 2826 207 0 0 0 chr2 15279037 15279060 -235408794 + (T)n Simple_repeat Simple_repeat 1 23 0 2487 82 0 13 chr2 15279078 15279393 -235408461 - AluY SINE Alu 0 311 1 2674 148 19 2 chr2 15279395 15279862 -235407992 - L1M3 LINE L1 -345 5823 5349 311 286 67 9 chr2 15279863 15279968 -235407886 - MIR3 SINE MIR -88 120 10 286 277 40 113 chr2 15280517 15280694 -235407160 + MIR SINE MIR 5 168 -40 212 232 18 36 chr2 15280715 15280771 -235407083 - L2 LINE L2 -14 3299 3245 1855 207 72 59 chr2 15280862 15280908 -235406946 + MLT1F LTR MaLR 1 45 -497 2382 100 3 0 chr2 15280908 15281208 -235406646 - AluSp SINE Alu -12 301 1 1855 207 72 59 chr2 15281208 15281687 -235406167 + MLT1F LTR MaLR 45 533 -9 196 330 17 42 chr2 15282335 15282453 -235405401 - L2 LINE L2 -477 2837 2723 296 311 52 37 chr2 15282725 15282860 -235404994 + MIR SINE MIR 35 171 -91 1506 192 32 3 chr2 15283355 15283667 -235404187 + L1MB8 LINE L1 5852 6172 -6 287 294 49 10 chr2 15283773 15283875 -235403979 - MIR3 SINE MIR -43 165 60 437 305 29 29 chr2 15284241 15284415 -235403439 - MIR3 SINE MIR -23 185 12 333 307 158 8 chr2 15284824 15284951 -235402903 + MIR SINE MIR 47 192 -70 2110 127 7 0 chr2 15285255 15285547 -235402307 - AluSq SINE Alu -19 294 1 2293 107 24 0 chr2 15285994 15286292 -235401562 + AluSx SINE Alu 1 305 -7 286 328 40 56 chr2 15286512 15286637 -235401217 - MIR SINE MIR -66 142 20 840 250 29 41 chr2 15287233 15287477 -235400377 + MIR SINE MIR 22 262 0 1981 66 0 59 chr2 15287723 15288056 -235399798 + L1PA7 LINE L1 5867 6182 0 355 278 8 24 chr2 15288170 15288296 -235399558 + MLT1I LTR MaLR 25 148 -261 619 255 98 0 chr2 15288347 15288500 -235399354 - MER58B DNA MER1_type 0 341 174 418 211 17 51 chr2 15288512 15288634 -235399220 + MER3 DNA MER1_type 6 2335 0 560 245 92 0 chr2 15288645 15288808 -235399046 + MLT1I LTR MaLR 232 409 0 315 372 11 21 chr2 15288808 15288996 -235398858 + L2 LINE L2 2864 3049 -223 5825 59 22 16 chr2 15289068 15290282 -235397572 - SVA Other Other -520 1047 1 2044 178 51 12 chr2 15291229 15291639 -235396215 + MSTB1 LTR MaLR 7 432 0 26 50 0 0 chr2 15293009 15293049 -235394805 + AT_rich Low_complexity Low_complexity 1 40 0 270 305 51 11 chr2 15293510 15293627 -235394227 + MIR SINE MIR 74 193 -42 279 244 100 0 chr2 15293654 15293744 -235394110 - L2 LINE L2 -264 3008 2910 787 207 7 0 chr2 15294593 15294738 -235393116 - MLT1G1 LTR MaLR 0 595 450 2191 75 0 0 chr2 15294775 15295041 -235392813 + AluY SINE Alu 33 298 -13 1113 223 9 0 chr2 15295175 15295395 -235392459 - AluJo SINE Alu 0 312 91 500 326 36 36 chr2 15295410 15295717 -235392137 - MLT1G1-int LTR MaLR -821 550 244 793 280 206 3 chr2 15295798 15296094 -235391760 - MLT1G1 LTR MaLR 0 595 240 351 226 274 0 chr2 15296134 15296258 -235391596 - MLT1G1 LTR MaLR -437 158 1 341 154 0 0 chr2 15296304 15296356 -235391498 + Alu SINE Alu 1 52 -247 * 636 243 26 7 chr2 15296317 15296469 -235391385 + MLT1E3 LTR MaLR 464 618 -6 875 248 28 83 chr2 15296470 15296857 -235390997 - MLT1B LTR MaLR -2 388 23 310 378 24 19 chr2 15297285 15297494 -235390360 - MIR SINE MIR -36 226 17 183 319 44 11 chr2 15298333 15298424 -235389430 - L2 LINE L2 -42 3230 3137 208 325 72 0 chr2 15298578 15298661 -235389193 - MIR SINE MIR -78 184 96 2388 79 0 13 chr2 15299414 15299719 -235388135 + AluSx SINE Alu 6 306 -6 1021 284 107 28 chr2 15300076 15300498 -235387356 - MER115 DNA AcHobo -238 455 1 232 196 107 0 chr2 15300718 15300774 -235387080 + MIR SINE MIR 68 129 -133 182 295 51 13 chr2 15301739 15301817 -235386037 + MIR SINE MIR 148 228 -34 602 196 0 0 chr2 15302256 15302358 -235385496 + FLAM_A SINE Alu 20 121 -21 362 62 297 0 chr2 15302662 15302771 -235385083 + AluSc SINE Alu 196 323 0 2332 172 21 13 chr2 15302786 15303263 -235384591 + L1MC1 LINE L1 5840 6320 -13 249 338 70 7 chr2 15303828 15303970 -235383884 - L2 LINE L2 -1 3312 3162 215 348 11 0 chr2 15304221 15304310 -235383544 - L2 LINE L2 -489 2825 2736 351 65 0 0 chr2 15304854 15304900 -235382954 + (TG)n Simple_repeat Simple_repeat 2 47 0 1467 110 18 5 chr2 15305074 15305292 -235382562 - pTR5 LTR ERV1 -2046 392 172 258 296 10 0 chr2 15305295 15305393 -235382461 - LTR30 LTR ERV1 -80 642 544 4520 112 26 35 chr2 15305397 15306476 -235381378 - pTR5 LTR ERV1 -417 2021 743 1645 132 8 0 chr2 15306580 15306831 -235381023 - L1PB3 LINE L1 -9 6145 5893 37 0 0 0 chr2 15306837 15306874 -235380980 + AT_rich Low_complexity Low_complexity 1 37 0 2145 70 3 54 chr2 15307074 15307423 -235380431 + AluY SINE Alu 1 334 0 209 310 28 0 chr2 15308330 15308401 -235379453 - MIR SINE MIR -89 119 47 487 276 23 35 chr2 15308429 15308603 -235379251 + MLT1L LTR MaLR 28 199 -416 5478 90 6 1 chr2 15308603 15309380 -235378474 - L1PA8 LINE L1 -14 6158 5378 1115 221 62 96 chr2 15309399 15309816 -235378038 + MLT1L LTR MaLR 196 598 -17 321 277 86 106 chr2 15309856 15310195 -235377659 + L2 LINE L2 2927 3258 -14 269 230 195 0 chr2 15310523 15310610 -235377244 + MIR SINE MIR 42 145 -63 4267 116 45 17 chr2 15310663 15311354 -235376500 - MER50 LTR ERV1 -24 710 1 940 194 6 6 chr2 15311497 15311667 -235376187 - FRAM SINE Alu -11 165 1 2171 207 62 40 chr2 15311721 15312210 -235375644 + MER74A LTR ERVL 16 519 -39 2563 87 3 8 chr2 15312210 15312567 -235375287 - THE1A LTR MaLR 0 355 1 2171 207 62 40 chr2 15312567 15312608 -235375246 + MER74A LTR ERVL 519 558 0 185 374 136 4 chr2 15314190 15314463 -235373391 + L2 LINE L2 2446 2754 -560 2061 212 26 11 chr2 15314625 15315078 -235372776 - MLT1C LTR MaLR -7 460 1 423 299 88 0 chr2 15315215 15315352 -235372502 + L2 LINE L2 3124 3272 0 191 306 108 25 chr2 15315422 15315579 -235372275 + L2 LINE L2 2623 2792 -522 260 265 60 0 chr2 15315590 15315673 -235372181 + L1ME LINE L1 5756 5843 -278 2378 160 29 47 chr2 15315689 15316139 -235371715 - MLT2B2 LTR ERVL -73 442 1 1998 216 58 11 chr2 15316407 15316869 -235370985 + MLT1E2 LTR MaLR 143 626 0 1830 161 48 7 chr2 15316884 15317176 -235370678 - AluJb SINE Alu -8 304 1 229 280 30 113 chr2 15317483 15317651 -235370203 - MIR SINE MIR -74 188 35 248 200 15 15 chr2 15319887 15319952 -235367902 - MLT2B2 LTR ERVL 0 515 451 2955 3 0 0 chr2 15320012 15320321 -235367533 - AluYa5 SINE Alu -2 309 1 195 365 19 9 chr2 15320729 15320836 -235367018 - L2 LINE L2 -286 2986 2879 2551 37 44 0 chr2 15321155 15321450 -235366404 + AluY SINE Alu 1 308 -3 309 312 38 32 chr2 15321485 15321642 -235366212 - L2 LINE L2 -814 2500 2343 365 320 124 36 chr2 15322515 15322903 -235364951 - L1ME3 LINE L1 -296 5866 5445 388 286 40 8 chr2 15323027 15323153 -235364701 - MIR SINE MIR -2 260 131 316 282 53 30 chr2 15323615 15323746 -235364108 + LTR67 LTR ERVL 424 557 0 1790 142 126 0 chr2 15323974 15324292 -235363562 - THE1B LTR MaLR -2 362 5 1890 175 7 0 chr2 15324409 15324717 -235363137 - AluJo SINE Alu -2 310 1 258 286 61 10 chr2 15324959 15325057 -235362797 + L2 LINE L2 3136 3238 -34 317 339 69 0 chr2 15325201 15325331 -235362523 - L2 LINE L2 -13 3259 3121 279 323 24 24 chr2 15325556 15325683 -235362171 - L2 LINE L2 -14 3258 3132 1896 157 10 0 chr2 15325690 15325990 -235361864 - AluJo SINE Alu -9 303 1 181 185 37 93 chr2 15326087 15326141 -235361713 - L2 LINE L2 0 3313 3263 269 368 125 32 chr2 15327033 15327313 -235360541 - L2 LINE L2 -49 3223 2918 529 315 208 16 chr2 15328564 15329117 -235358737 - L3 LINE CR1 -16 1561 903 314 279 48 108 chr2 15329417 15329470 -235358384 - L3 LINE CR1 -1083 494 439 2008 151 0 3 chr2 15329470 15329787 -235358067 - AluSx SINE Alu 0 312 1 314 279 48 108 chr2 15329787 15329984 -235357870 - L3 LINE CR1 -1138 439 259 1675 140 81 31 chr2 15330041 15330398 -235357456 + THE1C LTR MaLR 1 375 0 402 266 37 0 chr2 15330672 15330781 -235357073 + MER94 DNA DNA 1 113 -21 192 232 7 162 chr2 15331229 15331371 -235356483 - MIR3 SINE MIR -3 205 86 219 361 31 8 chr2 15331844 15332013 -235355841 + MIR SINE MIR 88 262 0 684 201 88 34 chr2 15332031 15332235 -235355619 - MER20 DNA MER1_type -3 216 2 305 300 107 27 chr2 15332274 15332424 -235355430 + MIR SINE MIR 6 167 -95 2426 64 0 3 chr2 15332706 15333002 -235354852 - AluY SINE Alu -14 297 3 290 270 133 0 chr2 15333123 15333272 -235354582 - MIR SINE MIR -65 143 23 218 297 8 51 chr2 15333338 15333368 -235354486 + GA-rich Low_complexity Low_complexity 5 35 -82 2004 172 21 3 chr2 15333368 15333751 -235354103 - MLT1B LTR MaLR 0 390 1 218 297 8 51 chr2 15333751 15333838 -235354016 + GA-rich Low_complexity Low_complexity 35 117 0 210 257 29 0 chr2 15334443 15334513 -235353341 - MIR SINE MIR -56 152 81 1260 243 23 32 chr2 15334998 15335344 -235352510 - MLT1C LTR MaLR 0 467 125 425 310 103 59 chr2 15336313 15336414 -235351440 - L2 LINE L2 -2 3311 3216 2361 87 7 0 chr2 15336414 15336703 -235351151 + AluSc SINE Alu 3 293 -16 425 310 103 59 chr2 15336703 15336940 -235350914 - L2 LINE L2 -97 3216 2958 1352 57 119 0 chr2 15337033 15337227 -235350627 + MER30 DNA MER1_type 14 230 0 303 261 34 0 chr2 15338254 15338342 -235349512 - MIR SINE MIR -71 137 47 186 305 17 85 chr2 15338654 15338831 -235349023 + L3 LINE CR1 774 938 -639 936 120 8 15 chr2 15338835 15338968 -235348886 - AluSq/x SINE Alu -181 132 1 521 338 71 11 chr2 15338984 15339253 -235348601 + L3 LINE CR1 938 1222 -355 189 356 81 0 chr2 15339352 15339439 -235348415 + L3 LINE CR1 1417 1510 -67 611 215 246 0 chr2 15339454 15339649 -235348205 - MIR SINE MIR 0 262 20 180 311 14 40 chr2 15339645 15339719 -235348135 + L3 LINE CR1 1504 1575 -2 * 252 286 51 0 chr2 15340537 15340635 -235347219 + L2 LINE L2 2946 3048 -224 201 74 0 0 chr2 15341444 15341471 -235346383 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 188 286 0 20 chr2 15341862 15341911 -235345943 - MIR SINE MIR -89 173 126 2171 104 27 7 chr2 15342240 15342537 -235345317 - AluSg SINE Alu -7 303 1 425 273 43 2 chr2 15343082 15343281 -235344573 - MIR SINE MIR -7 255 5 235 323 177 25 chr2 15344016 15344174 -235343680 - MIR SINE MIR -15 247 66 444 317 51 40 chr2 15344619 15344945 -235342909 + L2 LINE L2 2555 2886 -428 303 260 0 13 chr2 15345001 15345078 -235342776 + L2 LINE L2 2894 2969 -303 208 0 0 0 chr2 15345446 15345469 -235342385 + (TTTA)n Simple_repeat Simple_repeat 2 108 0 1872 139 18 4 chr2 15345469 15345749 -235342105 - AluSx SINE Alu -28 284 1 247 319 11 43 chr2 15345763 15345857 -235341997 - MIR SINE MIR -164 98 8 498 244 208 25 chr2 15346422 15346696 -235341158 + MLT1J2 LTR MaLR 1 324 -126 395 253 12 0 chr2 15346714 15346797 -235341057 + L2 LINE L2 3189 3272 0 181 307 188 0 chr2 15346827 15346928 -235340926 - MIR SINE MIR -72 190 71 269 320 34 54 chr2 15347088 15347235 -235340619 + MER5A DNA MER1_type 18 161 -28 * 426 340 27 7 chr2 15347109 15347259 -235340595 - MER5B DNA MER1_type -22 156 4 602 293 44 0 chr2 15347271 15347452 -235340402 + MIR SINE MIR 20 208 -54 981 261 80 3 chr2 15347780 15348094 -235339760 - L1MD2 LINE L1 -205 6154 5817 1038 93 7 0 chr2 15348100 15348240 -235339614 - AluSg/x SINE Alu -2 310 170 1790 218 107 6 chr2 15348242 15348710 -235339144 - L1ME1 LINE L1 -340 5826 5312 2498 241 43 30 chr2 15348731 15349700 -235338154 - L1ME1 LINE L1 -5 6095 5109 1270 233 167 12 chr2 15349704 15350124 -235337730 - L1MD2 LINE L1 -10 6349 5865 562 117 47 39 chr2 15350130 15350258 -235337596 - L1MDa LINE L1 -3922 2618 2490 * 1267 170 26 26 chr2 15350241 15350552 -235337302 - L1MDa LINE L1 -4375 2165 1855 * 2070 237 94 16 chr2 15350551 15351047 -235336807 - L1ME1 LINE L1 -1054 5026 4570 1036 203 85 42 chr2 15351047 15351377 -235336477 + MER2 DNA MER2_type 1 344 0 2070 237 94 16 chr2 15351377 15351712 -235336142 - L1ME1 LINE L1 -1510 4570 3977 895 201 6 0 chr2 15351712 15351876 -235335978 - MLT1E LTR MaLR 0 593 429 255 191 0 0 chr2 15351876 15351918 -235335936 + AluSp SINE Alu 136 177 -126 1731 191 26 0 chr2 15351998 15352302 -235335552 - AluJo SINE Alu 0 312 1 4044 246 20 25 chr2 15352304 15353631 -235334223 - L1ME1 LINE L1 -2299 3781 2462 300 253 42 42 chr2 15353624 15353719 -235334135 - L1ME1 LINE L1 -5970 100 6 * 198 345 95 0 chr2 15354285 15354401 -235333453 - MIR3 SINE MIR -69 139 13 751 295 0 20 chr2 15354810 15355010 -235332844 - MIR SINE MIR 0 262 67 511 308 133 56 chr2 15355657 15355979 -235331875 + L2 LINE L2 2926 3272 0 341 256 53 6 chr2 15356193 15356324 -235331530 - MIR SINE MIR -9 199 58 277 224 0 66 chr2 15357601 15357677 -235330177 - MIR SINE MIR -100 108 38 290 241 36 24 chr2 15357714 15357797 -235330057 + MIR3 SINE MIR 110 193 -15 297 235 139 12 chr2 15358004 15358122 -235329732 + MIR SINE MIR 54 182 -68 411 277 62 15 chr2 15358479 15358609 -235329245 - MIR SINE MIR -70 192 57 194 321 36 0 chr2 15358820 15358876 -235328978 - L2 LINE L2 0 3272 3215 525 270 56 42 chr2 15359538 15359753 -235328101 + MIR SINE MIR 13 230 -32 400 323 214 5 chr2 15359893 15360085 -235327769 - L3 LINE CR1 -8 1569 1338 251 333 82 0 chr2 15360448 15360605 -235327249 + MIR SINE MIR 1 171 -37 285 159 159 0 chr2 15362318 15362381 -235325473 + L1MC1 LINE L1 6259 6331 -2 424 329 7 0 chr2 15362484 15362621 -235325233 + MIR SINE MIR 109 246 -16 185 354 31 31 chr2 15363743 15363873 -235323981 - MIR3 SINE MIR -76 132 3 257 298 85 21 chr2 15364399 15364493 -235323361 + MIR3 SINE MIR 60 159 -49 194 343 125 28 chr2 15364661 15364877 -235322977 - L2 LINE L2 -337 2977 2741 186 189 0 0 chr2 15364901 15364938 -235322916 + (TAA)n Simple_repeat Simple_repeat 2 38 0 1122 198 28 32 chr2 15364970 15365222 -235322632 + MLT1A1 LTR MaLR 115 365 0 237 245 98 98 chr2 15365486 15365690 -235322164 + L2 LINE L2 2507 2710 -604 3687 160 26 75 chr2 15365692 15366565 -235321289 + L1MB5 LINE L1 5344 6174 0 1197 271 89 19 chr2 15366623 15367188 -235320666 + L2 LINE L2 2703 3313 0 226 284 0 15 chr2 15367321 15367388 -235320466 + MIR SINE MIR 173 238 -24 1767 181 10 44 chr2 15367552 15367939 -235319915 + MLT1B LTR MaLR 6 379 -11 266 0 29 0 chr2 15368487 15368521 -235319333 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1493 218 68 2 chr2 15368574 15368969 -235318885 + MER97a DNA MER1_type? 243 663 -231 1635 142 84 18 chr2 15368969 15369244 -235318610 - AluJb SINE Alu -13 299 7 381 226 43 34 chr2 15369250 15369309 -235318545 + MER97b DNA MER1_type? 725 782 -271 627 149 0 26 chr2 15369309 15369423 -235318431 + L1MA3 LINE L1 6195 6305 0 381 226 43 34 chr2 15369423 15369532 -235318322 + MER97b DNA MER1_type? 782 1051 -2 294 357 24 0 chr2 15369748 15369874 -235317980 + MIR3 SINE MIR 52 180 -28 272 294 106 44 chr2 15371010 15371190 -235316664 - MIR SINE MIR -33 229 39 2508 112 3 32 chr2 15371278 15371653 -235316201 + THE1B LTR MaLR 1 364 0 363 283 30 41 chr2 15372306 15372487 -235315367 - MIR SINE MIR -63 145 16 381 272 169 42 chr2 15373120 15373333 -235314521 + MIR SINE MIR 12 251 -11 391 229 77 77 chr2 15373458 15373628 -235314226 - MIR3 SINE MIR -32 176 7 221 245 230 0 chr2 15373716 15373826 -235314028 + MIR SINE MIR 45 190 -56 477 318 35 12 chr2 15373993 15374166 -235313688 + MIR3 SINE MIR 15 191 -17 201 333 28 9 chr2 15375377 15375485 -235312369 + MIR SINE MIR 38 147 -61 187 295 172 0 chr2 15376168 15376290 -235311564 + MIR3 SINE MIR 10 152 -56 259 341 91 0 chr2 15376364 15376496 -235311358 + MIR SINE MIR 48 191 -71 2262 101 0 46 chr2 15376584 15376911 -235310943 + AluSq SINE Alu 1 312 -1 182 254 141 45 chr2 15376967 15377144 -235310710 + L2 LINE L2 2760 2953 -361 304 235 15 0 chr2 15377170 15377238 -235310616 + MER81 DNA DNA 26 94 -20 396 248 31 16 chr2 15377339 15377468 -235310386 + L2 LINE L2 3102 3232 -81 277 306 149 15 chr2 15377490 15377624 -235310230 - MIR SINE MIR -77 185 34 211 315 43 11 chr2 15377652 15377744 -235310110 + L2 LINE L2 3219 3313 0 464 302 23 17 chr2 15378535 15378707 -235309147 - MIR SINE MIR -43 219 47 279 244 61 12 chr2 15378780 15378862 -235308992 - MIR3 SINE MIR -21 187 102 212 317 77 0 chr2 15381274 15381378 -235306476 + MIR3 SINE MIR 82 193 -15 1193 249 12 15 chr2 15382092 15382429 -235305425 + L1ME2 LINE L1 5820 6155 -9 1939 179 97 2 chr2 15382442 15382873 -235304981 + L1MB8 LINE L1 5707 6178 0 225 273 168 28 chr2 15383099 15383242 -235304612 + MIR SINE MIR 97 259 -3 * 229 328 26 35 chr2 15383232 15383348 -235304506 - MIR SINE MIR -102 160 46 1951 162 14 14 chr2 15383615 15383655 -235304199 + MLT1A1 LTR MaLR 1 40 -325 7539 38 2 0 chr2 15383655 15385007 -235302847 - L1PA4 LINE L1 0 6155 4803 1951 162 14 14 chr2 15385007 15385331 -235302523 + MLT1A1 LTR MaLR 39 365 0 2145 161 36 0 chr2 15386197 15386588 -235301266 - L1MB3 LINE L1 -10 6173 5769 197 298 35 0 chr2 15386610 15386667 -235301187 - L2 LINE L2 -31 3282 3224 2104 127 0 0 chr2 15387350 15387683 -235300171 - AluSx SINE Alu 0 333 1 1808 176 3 3 chr2 15388040 15388342 -235299512 + AluJo SINE Alu 5 306 -6 1936 154 3 0 chr2 15388397 15388716 -235299138 - AluSx SINE Alu 0 320 1 726 133 4 16 chr2 15390140 15390397 -235297457 + (TG)n Simple_repeat Simple_repeat 1 254 0 265 273 91 30 chr2 15390737 15390836 -235297018 - L2 LINE L2 0 3313 3209 352 254 54 39 chr2 15391918 15392048 -235295806 - L3 LINE CR1 -47 1530 1399 499 196 92 49 chr2 15392271 15392456 -235295398 - MIR3 SINE MIR -57 151 7 505 282 107 29 chr2 15395210 15395416 -235292438 - MIR SINE MIR -20 242 21 494 322 65 15 chr2 15395384 15395583 -235292271 + MIR SINE MIR 37 245 -17 * 812 253 93 4 chr2 15395733 15395800 -235292054 - MIR SINE MIR -5 257 197 2175 124 0 0 chr2 15395800 15396098 -235291756 - AluSx SINE Alu -14 298 1 812 253 93 4 chr2 15396098 15396255 -235291599 - MIR SINE MIR -65 197 13 445 248 28 28 chr2 15396286 15396431 -235291423 + L2 LINE L2 3169 3313 0 673 117 36 0 chr2 15396822 15396959 -235290895 + (TCCA)n Simple_repeat Simple_repeat 3 144 0 633 149 37 0 chr2 15396987 15397148 -235290706 + (TCCA)n Simple_repeat Simple_repeat 4 170 0 29 0 0 0 chr2 15448233 15448262 -235239592 + AT_rich Low_complexity Low_complexity 1 29 0 221 165 108 108 chr2 15448546 15448629 -235239225 - MIR SINE MIR -63 145 66 2179 106 7 0 chr2 15449159 15449460 -235238394 - AluSp SINE Alu -10 303 1 2167 98 3 16 chr2 15450279 15450586 -235237268 + AluSx SINE Alu 1 303 -9 306 0 0 0 chr2 15450714 15450748 -235237106 + (TA)n Simple_repeat Simple_repeat 1 34 0 247 237 0 144 chr2 15451978 15452053 -235235801 - L3 LINE CR1 -16 1561 1507 2033 189 45 13 chr2 15452053 15452502 -235235352 - MLT1C LTR MaLR -1 466 4 247 237 0 144 chr2 15452502 15452544 -235235310 - L3 LINE CR1 -70 1507 1461 318 318 0 0 chr2 15452631 15452719 -235235135 - L2 LINE L2 -1 3312 3225 376 247 0 0 chr2 15452878 15452959 -235234895 + MER94 DNA DNA 2 82 -52 184 276 43 69 chr2 15452979 15453095 -235234759 - L3 LINE CR1 -386 1191 1079 267 322 54 13 chr2 15454780 15454929 -235232925 - MIR3 SINE MIR -43 165 11 1483 153 58 0 chr2 15455293 15455534 -235232320 + AluSq SINE Alu 1 255 -58 1636 171 10 3 chr2 15455576 15455868 -235231986 - AluJo SINE Alu -18 294 1 191 315 39 46 chr2 15456043 15456173 -235231681 - MIR SINE MIR -57 205 77 220 309 85 11 chr2 15456190 15456284 -235231570 - MIR SINE MIR -26 236 136 1008 259 36 68 chr2 15456294 15456870 -235230984 + L1MC4a LINE L1 4637 5194 -952 7265 53 2 1 chr2 15456928 15457926 -235229928 + L1PA6 LINE L1 5158 6154 0 287 257 0 0 chr2 15457951 15458025 -235229829 + L1MC4a LINE L1 5368 5441 -733 39 0 0 0 chr2 15458036 15458075 -235229779 + AT_rich Low_complexity Low_complexity 1 39 0 873 283 99 27 chr2 15458075 15458487 -235229367 + L1ME3 LINE L1 5374 5834 -328 1954 93 62 0 chr2 15458487 15458777 -235229077 + AluSx SINE Alu 1 308 -4 873 283 99 27 chr2 15458777 15458887 -235228967 + L1ME3 LINE L1 5834 5935 -227 322 279 50 35 chr2 15459067 15459268 -235228586 + L1MC4a LINE L1 5683 5886 -1922 237 265 137 51 chr2 15460187 15460304 -235227550 + L2 LINE L2 3129 3255 -17 269 279 38 0 chr2 15460392 15460471 -235227383 + ORSL DNA AcHobo 1 82 -193 2019 113 24 3 chr2 15460471 15460764 -235227090 + AluSx SINE Alu 1 299 -13 234 216 39 0 chr2 15460764 15460815 -235227039 + ORSL DNA AcHobo 221 273 -2 2263 107 0 0 chr2 15461081 15461390 -235226464 - AluSx SINE Alu -3 309 1 243 372 110 28 chr2 15461414 15461704 -235226150 - L2 LINE L2 -784 2530 2217 2020 141 0 0 chr2 15462353 15462652 -235225202 + AluSx SINE Alu 1 299 -13 1935 132 4 0 chr2 15462669 15462977 -235224877 + AluSx SINE Alu 1 309 0 708 349 48 14 chr2 15462979 15463274 -235224580 - L3 LINE CR1 -21 1556 1252 2138 115 0 7 chr2 15463435 15463739 -235224115 + AluSg SINE Alu 1 302 -8 630 226 194 5 chr2 15464027 15464213 -235223641 + MIR SINE MIR 30 250 -12 2059 101 21 3 chr2 15464675 15464961 -235222893 - AluSx SINE Alu -21 291 1 386 318 40 0 chr2 15465628 15465754 -235222100 + MIR3 SINE MIR 72 202 -6 1781 139 0 7 chr2 15466320 15466608 -235221246 + AluJb SINE Alu 26 311 -1 2251 91 7 3 chr2 15467180 15467487 -235220367 - AluSc SINE Alu -1 308 1 1336 265 79 36 chr2 15467852 15468483 -235219371 + HAL1 LINE L1 1083 1740 -767 1999 186 28 0 chr2 15468507 15468862 -235218992 - MLT1A1 LTR MaLR 0 365 1 944 288 43 29 chr2 15468928 15469234 -235218620 - MLT1I LTR MaLR -57 352 57 504 296 84 47 chr2 15469264 15469670 -235218184 + HAL1 LINE L1 1823 2243 -264 1618 171 7 30 chr2 15469782 15470086 -235217768 + AluJo SINE Alu 1 297 -15 369 267 68 62 chr2 15470873 15470910 -235216944 + L1ME4a LINE L1 5762 5797 -324 2247 99 0 0 chr2 15470910 15471212 -235216642 - AluSx SINE Alu -9 303 2 369 267 68 62 chr2 15471212 15471320 -235216534 + L1ME4a LINE L1 5797 5908 -213 513 264 16 8 chr2 15471476 15471597 -235216257 + MIR3 SINE MIR 38 159 -49 2174 73 0 3 chr2 15472375 15472662 -235215192 + AluY SINE Alu 1 286 -25 216 0 0 0 chr2 15472662 15472686 -235215168 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 2196 67 17 3 chr2 15472888 15473188 -235214666 - AluY SINE Alu -7 304 1 201 273 15 15 chr2 15474120 15474186 -235213668 + L3 LINE CR1 878 943 -634 630 277 184 0 chr2 15475061 15475267 -235212587 - MIR SINE MIR -4 258 15 245 322 136 47 chr2 15475741 15475955 -235211899 + MIR SINE MIR 25 257 -5 523 291 30 0 chr2 15476015 15476180 -235211674 - L3 LINE CR1 -228 1349 1180 396 364 63 31 chr2 15477085 15477404 -235210450 + L3b LINE CR1 1179 1507 -76 374 203 38 0 chr2 15477849 15477928 -235209926 + Tigger3(Golem) DNA MER2_type 1 82 -2947 * 1167 155 91 94 chr2 15477926 15477955 -235209899 + Tigger3(Golem) DNA MER2_type 2722 2750 -279 1895 152 0 0 chr2 15477955 15478245 -235209609 - AluSx SINE Alu -22 290 1 1167 155 91 94 chr2 15478245 15478290 -235209564 + Tigger3(Golem) DNA MER2_type 2750 2794 -235 2070 68 0 90 chr2 15478290 15478657 -235209197 - AluSg SINE Alu 0 339 1 183 42 0 0 chr2 15478658 15478682 -235209172 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2069 98 3 3 chr2 15478682 15478968 -235208886 - AluSq SINE Alu -27 286 1 1167 155 91 94 chr2 15478968 15479197 -235208657 + Tigger3(Golem) DNA MER2_type 2792 3029 0 222 283 0 0 chr2 15479197 15479257 -235208597 + (TATG)n Simple_repeat Simple_repeat 3 62 0 2467 226 66 21 chr2 15479279 15479842 -235208012 + MER82 DNA MER2_type 7 594 -59 811 179 19 12 chr2 15479844 15480006 -235207848 - AluSp SINE Alu -16 297 135 272 254 16 0 chr2 15480006 15480069 -235207785 + MER82 DNA MER2_type 589 652 -1 264 161 37 0 chr2 15480523 15480604 -235207250 + (TG)n Simple_repeat Simple_repeat 1 84 0 896 291 42 0 chr2 15480660 15480901 -235206953 + MIR SINE MIR 12 262 0 705 160 120 4 chr2 15481514 15481739 -235206115 + AluSx SINE Alu 5 255 -57 198 128 0 0 chr2 15481764 15481803 -235206051 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 835 260 70 45 chr2 15481828 15482344 -235205510 + HAL1 LINE L1 1978 2506 -1 918 151 7 0 chr2 15483157 15483303 -235204551 - AluSg/x SINE Alu -26 286 140 217 200 44 0 chr2 15483333 15483378 -235204476 + CT-rich Low_complexity Low_complexity 3 49 0 24 0 0 0 chr2 15483378 15483402 -235204452 + AT_rich Low_complexity Low_complexity 1 24 0 524 294 80 33 chr2 15483457 15483732 -235204122 - L2 LINE L2 -101 3212 2925 301 263 128 38 chr2 15483823 15483956 -235203898 - LTR16A LTR ERVL -10 440 296 798 264 68 28 chr2 15483970 15484296 -235203558 - HERV16 LTR ERVL -4468 528 190 521 319 72 50 chr2 15484472 15484559 -235203295 - LTR16A LTR ERVL -30 420 336 2176 116 0 0 chr2 15484559 15484869 -235202985 + AluSx SINE Alu 2 311 -1 521 319 72 50 chr2 15484869 15485101 -235202753 - LTR16A LTR ERVL -114 336 94 2193 116 3 0 chr2 15485634 15485945 -235201909 + AluSx SINE Alu 1 312 0 631 160 15 2 chr2 15485972 15486234 -235201620 + AluSx SINE Alu 1 308 -1 198 175 100 0 chr2 15486443 15486483 -235201371 - L2 LINE L2 -11 3261 3218 611 243 79 21 chr2 15487247 15487436 -235200418 + MIR SINE MIR 12 211 -51 245 325 145 75 chr2 15487792 15487846 -235200008 + L2 LINE L2 2485 2534 -780 1925 133 0 3 chr2 15487846 15488169 -235199685 - AluSx SINE Alu 0 322 1 245 325 145 75 chr2 15488169 15488368 -235199486 + L2 LINE L2 2534 2757 -557 217 329 12 37 chr2 15488568 15488650 -235199204 - L2 LINE L2 0 3313 3234 345 87 0 0 chr2 15488767 15488813 -235199041 - Alu SINE Alu -262 46 1 246 160 0 20 chr2 15488876 15488926 -235198928 - L2 LINE L2 -1 3312 3264 1855 141 0 35 chr2 15489225 15489537 -235198317 + AluSx SINE Alu 1 301 -11 602 186 0 0 chr2 15489878 15489980 -235197874 + MLT1I LTR MaLR 308 409 0 275 272 123 41 chr2 15490859 15490999 -235196855 - MIR SINE MIR -68 140 23 2024 121 6 19 chr2 15491498 15491813 -235196041 + AluSx SINE Alu 1 311 -1 1716 91 43 0 chr2 15492029 15492283 -235195571 + AluSx SINE Alu 1 265 -47 27 0 0 0 chr2 15492287 15492314 -235195540 + AT_rich Low_complexity Low_complexity 1 27 0 1033 145 19 39 chr2 15493770 15493804 -235194050 + AluSg/x SINE Alu 106 139 -173 2117 124 0 0 chr2 15493804 15494103 -235193751 + AluSx SINE Alu 1 299 -13 1033 145 19 39 chr2 15494103 15494275 -235193579 + AluSg/x SINE Alu 139 308 -4 443 286 133 32 chr2 15494331 15495026 -235192828 - L1ME4a LINE L1 -113 6008 5219 1969 133 0 7 chr2 15495276 15495576 -235192278 - AluJb SINE Alu -14 298 1 200 111 28 0 chr2 15495665 15495701 -235192153 + (TG)n Simple_repeat Simple_repeat 2 38 0 1143 195 180 0 chr2 15495934 15496206 -235191648 - MSTD LTR MaLR 0 396 76 3253 129 23 4 chr2 15496289 15496776 -235191078 + MER41E LTR ERV1 1 496 -16 397 200 12 12 chr2 15496767 15496847 -235191007 - MSTD LTR MaLR -316 80 1 * 216 237 301 11 chr2 15497118 15497211 -235190643 - MIR SINE MIR -73 135 16 274 274 27 0 chr2 15498345 15498418 -235189436 - MIR SINE MIR -87 175 101 216 135 0 0 chr2 15502263 15502300 -235185554 + (T)n Simple_repeat Simple_repeat 1 37 0 534 270 220 10 chr2 15503509 15503709 -235184145 - MIR SINE MIR -1 261 20 231 167 0 0 chr2 15503781 15503823 -235184031 + (TA)n Simple_repeat Simple_repeat 2 43 0 2153 103 0 0 chr2 15503829 15504131 -235183723 - AluSq SINE Alu -11 302 1 203 175 0 0 chr2 15504322 15504362 -235183492 + GA-rich Low_complexity Low_complexity 3 42 0 193 287 53 43 chr2 15505955 15506049 -235181805 - MIR SINE MIR -87 175 81 206 292 92 0 chr2 15506549 15506614 -235181240 + L3 LINE CR1 1265 1335 -242 231 273 45 34 chr2 15506788 15506876 -235180978 - MIR SINE MIR -60 148 60 2060 117 0 7 chr2 15506911 15507210 -235180644 - AluSc SINE Alu -12 297 1 212 353 69 0 chr2 15508639 15508741 -235179113 + L2 LINE L2 3146 3254 -18 261 254 123 14 chr2 15509257 15509395 -235178459 + L1ME1 LINE L1 3006 3158 -2988 621 122 8 15 chr2 15509395 15509633 -235178221 + AluSx SINE Alu 19 306 -6 6853 215 43 82 chr2 15509639 15509731 -235178123 + L1ME1 LINE L1 3170 3264 -2902 2419 180 13 15 chr2 15509731 15510193 -235177661 + MER65C LTR ERV1 1 461 0 6853 215 43 82 chr2 15510193 15511634 -235176220 + L1ME1 LINE L1 3264 4760 -1406 2036 122 10 10 chr2 15511634 15511946 -235175908 + AluSx SINE Alu 1 312 0 6853 215 43 82 chr2 15511946 15512488 -235175366 + L1ME1 LINE L1 4760 5322 -844 1449 181 61 20 chr2 15512488 15512781 -235175073 + AluJo SINE Alu 1 305 -7 6853 215 43 82 chr2 15512781 15513173 -235174681 + L1ME1 LINE L1 5322 5728 -438 2379 113 25 22 chr2 15513173 15513536 -235174318 + THE1B LTR MaLR 1 364 0 6853 215 43 82 chr2 15513536 15513573 -235174281 + L1ME1 LINE L1 5728 5765 -401 2233 111 0 0 chr2 15513573 15513880 -235173974 + AluSx SINE Alu 1 307 -5 6853 215 43 82 chr2 15513880 15514124 -235173730 + L1ME1 LINE L1 5765 6017 -149 2389 81 3 0 chr2 15514124 15514432 -235173422 + AluSp SINE Alu 5 313 0 6853 215 43 82 chr2 15514432 15514494 -235173360 + L1ME1 LINE L1 6017 6080 -86 602 217 9 0 chr2 15514494 15514609 -235173245 + FLAM_A SINE Alu 1 116 -17 266 85 0 21 chr2 15514618 15514665 -235173189 + (TA)n Simple_repeat Simple_repeat 1 46 0 6853 215 43 82 chr2 15514665 15514728 -235173126 + L1ME1 LINE L1 6088 5929 -237 2076 115 26 0 chr2 15514728 15515033 -235172821 + AluSq SINE Alu 1 313 0 6853 215 43 82 chr2 15515033 15515126 -235172728 + L1ME1 LINE L1 5928 6023 -143 2064 114 0 0 chr2 15515126 15515423 -235172431 + AluSx SINE Alu 1 297 -15 659 200 19 19 chr2 15515434 15515589 -235172265 + L1MA10 LINE L1 6180 6334 0 267 299 60 22 chr2 15515639 15515773 -235172081 + HAL1 LINE L1 1810 1948 -559 2083 102 7 0 chr2 15515798 15516081 -235171773 + AluSx SINE Alu 1 285 -27 836 283 133 54 chr2 15516481 15517242 -235170612 + L2 LINE L2 1863 2683 -631 1985 141 0 0 chr2 15517498 15517802 -235170052 - AluSx SINE Alu -8 304 1 461 281 20 48 chr2 15517855 15518001 -235169853 + MIR3 SINE MIR 4 145 -63 25 0 0 0 chr2 15518610 15518635 -235169219 + AT_rich Low_complexity Low_complexity 1 25 0 373 254 125 49 chr2 15518989 15519253 -235168601 + HAL1 LINE L1 2220 2503 -4 742 129 17 46 chr2 15519260 15519500 -235168354 + GA-rich Low_complexity Low_complexity 1 233 0 2076 119 10 0 chr2 15519650 15519952 -235167902 + AluSp SINE Alu 1 305 -8 611 271 88 41 chr2 15520548 15520832 -235167022 + L1MC4a LINE L1 5706 6010 -1798 1328 133 24 139 chr2 15520832 15521169 -235166685 + AluSx SINE Alu 1 298 -4 611 271 88 41 chr2 15521169 15521224 -235166630 + L1MC4a LINE L1 6010 6061 -1747 595 304 120 69 chr2 15521227 15521717 -235166137 + L1MC4a LINE L1 6082 6596 -1212 279 191 0 0 chr2 15521717 15521780 -235166074 + GA-rich Low_complexity Low_complexity 1 63 0 242 182 45 0 chr2 15521783 15521827 -235166027 + L1MC4 LINE L1 6697 6742 -1300 1771 42 9 0 chr2 15521827 15522041 -235165813 + L1PA3 LINE L1 5937 6152 -3 1874 220 32 131 chr2 15522099 15522824 -235165030 + L1MC5 LINE L1 6669 7230 -731 453 81 0 0 chr2 15522824 15522886 -235164968 + (TGGA)n Simple_repeat Simple_repeat 3 64 0 1874 220 32 131 chr2 15522886 15523358 -235164496 + L1MC5 LINE L1 7230 7747 -214 426 197 28 0 chr2 15523489 15523560 -235164294 + MER81 DNA DNA 5 77 -37 1495 194 51 0 chr2 15523563 15523856 -235163998 + AluJb SINE Alu 1 308 -4 505 299 138 31 chr2 15523872 15524257 -235163597 + L1MC/D LINE L1 5353 5778 -2030 1736 145 0 53 chr2 15524258 15524561 -235163293 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr2 15524566 15524588 -235163266 + AT_rich Low_complexity Low_complexity 1 22 0 325 236 97 0 chr2 15524725 15524797 -235163057 - MER58 DNA MER1_type 0 2420 2342 283 323 96 25 chr2 15524788 15524986 -235162868 + MLT1J2 LTR MaLR 116 327 -123 * 1479 164 141 0 chr2 15525065 15525321 -235162533 + AluJo SINE Alu 2 293 -9 231 286 31 61 chr2 15525563 15525661 -235162193 - MIR SINE MIR -75 187 93 263 307 46 38 chr2 15526071 15526231 -235161623 + MIR SINE MIR 30 188 -57 1141 231 108 91 chr2 15526477 15526574 -235161280 + MLT1G1 LTR MaLR 1 95 -500 2066 123 0 0 chr2 15526574 15526874 -235160980 + AluSq SINE Alu 1 300 -13 1141 231 108 91 chr2 15526874 15527361 -235160493 + MLT1G1 LTR MaLR 95 595 0 381 295 102 55 chr2 15527556 15527922 -235159932 - L2 LINE L2 0 3272 2864 2084 116 0 10 chr2 15527922 15528233 -235159621 + AluSx SINE Alu 1 308 -4 381 295 102 55 chr2 15528233 15528374 -235159480 - L2 LINE L2 -408 2864 2731 432 0 0 0 chr2 15528668 15528716 -235159138 + (CA)n Simple_repeat Simple_repeat 1 48 0 243 88 0 0 chr2 15529208 15529242 -235158612 + (CA)n Simple_repeat Simple_repeat 1 34 0 288 100 125 75 chr2 15530035 15530115 -235157739 + MER5A DNA MER1_type 9 92 -97 205 186 68 34 chr2 15530645 15530704 -235157150 - MIR SINE MIR -70 192 132 455 309 67 6 chr2 15531882 15532047 -235155807 - MIR SINE MIR -80 182 8 1841 157 0 10 chr2 15532502 15532815 -235155039 + AluSx SINE Alu 2 311 -1 3037 150 2 43 chr2 15532969 15533550 -235154304 + L1MB3 LINE L1 5613 6169 -14 437 226 104 0 chr2 15533600 15533715 -235154139 - MIR SINE MIR -66 142 16 236 311 37 30 chr2 15533843 15533978 -235153876 + MIR3 SINE MIR 66 201 -7 198 0 0 0 chr2 15534447 15534469 -235153385 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 809 249 117 36 chr2 15534678 15535181 -235152673 - L1ME4a LINE L1 0 6121 5578 180 263 128 98 chr2 15535350 15535483 -235152371 + MIR3 SINE MIR 5 141 -67 588 222 54 76 chr2 15536489 15536674 -235151180 + HAL1 LINE L1 25 205 -2302 230 252 119 84 chr2 15536864 15536883 -235150971 + HAL1 LINE L1 1301 1318 -1189 486 0 0 0 chr2 15536883 15536937 -235150917 + (TA)n Simple_repeat Simple_repeat 2 55 0 1460 171 0 8 chr2 15536937 15537189 -235150665 - AluJb SINE Alu -26 286 37 230 252 119 84 chr2 15537189 15537311 -235150543 + HAL1 LINE L1 1317 1448 -1059 203 54 81 0 chr2 15537323 15537360 -235150494 + T-rich Low_complexity Low_complexity 3 42 0 794 207 59 17 chr2 15537375 15537612 -235150242 + HAL1 LINE L1 1508 1754 -753 4674 231 67 109 chr2 15537631 15538239 -235149615 + L1MEc LINE L1 66 698 -5698 950 129 8 0 chr2 15538239 15538371 -235149483 + FLAM_C SINE Alu 1 133 0 4674 231 67 109 chr2 15538371 15538561 -235149293 + L1MEc LINE L1 698 895 -5501 1722 157 3 23 chr2 15538561 15538867 -235148987 + AluSx SINE Alu 1 300 -12 4674 231 67 109 chr2 15538867 15539207 -235148647 + L1MEc LINE L1 895 1248 -5148 295 274 23 3 chr2 15539207 15539323 -235148531 + MLT1F1 LTR MaLR 30 147 -420 4674 231 67 109 chr2 15539323 15539375 -235148479 + L1MEc LINE L1 1248 1301 -5095 1901 140 3 0 chr2 15539375 15539667 -235148187 + AluSx SINE Alu 1 293 -19 4674 231 67 109 chr2 15539667 15540665 -235147189 + L1MEc LINE L1 1301 2274 -4122 437 287 32 43 chr2 15540670 15540858 -235146996 + MLT1F1 LTR MaLR 1 186 -356 225 132 0 0 chr2 15540858 15540896 -235146958 + (TC)n Simple_repeat Simple_repeat 2 39 0 212 119 0 24 chr2 15540917 15540959 -235146895 + (TC)n Simple_repeat Simple_repeat 2 42 0 962 216 118 15 chr2 15540959 15541276 -235146578 + MLT1F1 LTR MaLR 184 567 0 3674 146 41 65 chr2 15541327 15541635 -235146219 + L1MB4 LINE L1 5444 5758 -422 1903 117 0 4 chr2 15541635 15541908 -235145946 + AluSx SINE Alu 21 292 -20 3674 146 41 65 chr2 15541908 15542066 -235145788 + L1MB4 LINE L1 5758 5918 -262 2147 113 3 3 chr2 15542066 15542375 -235145479 + AluSg1 SINE Alu 1 309 0 3674 146 41 65 chr2 15542375 15542662 -235145192 + L1MB4 LINE L1 5918 6180 0 538 259 102 25 chr2 15542660 15542934 -235144920 + L1MEc LINE L1 2262 2556 -3659 * 1922 127 0 10 chr2 15542935 15543226 -235144628 + AluSx SINE Alu 1 288 -24 533 196 0 0 chr2 15543255 15543357 -235144497 + U13 snRNA snRNA 1 102 -2 22 0 0 0 chr2 15543366 15543388 -235144466 + AT_rich Low_complexity Low_complexity 1 22 0 1694 212 20 36 chr2 15543388 15543671 -235144183 + L1MEc LINE L1 2546 2821 -3394 2054 128 0 0 chr2 15543671 15543969 -235143885 - AluSx SINE Alu -14 298 1 1694 212 20 36 chr2 15543969 15544129 -235143725 + L1MEc LINE L1 2821 2982 -3233 4104 150 93 50 chr2 15544494 15545436 -235142418 - THE1C-int LTR MaLR -597 983 1 2505 112 11 16 chr2 15545436 15545812 -235142042 - THE1C LTR MaLR 0 375 2 2785 237 38 3 chr2 15545813 15546396 -235141458 + MER82 DNA MER2_type 45 647 -6 1959 141 3 3 chr2 15546732 15547031 -235140823 + AluSx SINE Alu 1 299 -13 482 318 103 20 chr2 15548839 15549034 -235138820 - MIR SINE MIR -15 247 37 185 289 58 0 chr2 15549657 15549709 -235138145 + L2 LINE L2 3217 3271 -1 612 167 0 0 chr2 15549763 15549865 -235137989 + MER81 DNA DNA 7 108 -6 271 333 72 56 chr2 15549872 15550061 -235137793 - L2 LINE L2 -21 3251 3067 1516 51 0 0 chr2 15550061 15550238 -235137616 - AluY SINE Alu -14 297 121 271 333 72 56 chr2 15550238 15550480 -235137374 - L2 LINE L2 -205 3067 2813 330 211 0 0 chr2 15550589 15550646 -235137208 - L2 LINE L2 -1 3271 3215 460 211 238 7 chr2 15552125 15552272 -235135582 + MER5A DNA MER1_type 9 189 0 680 222 0 81 chr2 15552280 15552465 -235135389 + MER5B DNA MER1_type 1 170 -8 582 278 22 120 chr2 15552642 15552868 -235134986 + L2 LINE L2 2981 3167 -105 1958 88 4 0 chr2 15552868 15553117 -235134737 - AluSc SINE Alu -45 264 15 582 278 22 120 chr2 15553117 15553214 -235134640 + L2 LINE L2 3167 3272 0 206 333 43 0 chr2 15553221 15553290 -235134564 - L2 LINE L2 -64 3249 3178 380 243 18 36 chr2 15556143 15556254 -235131600 + L3 LINE CR1 1312 1420 -157 204 256 0 0 chr2 15556272 15556311 -235131543 - L2 LINE L2 -20 3293 3255 391 285 73 29 chr2 15556336 15556473 -235131381 - MIR3 SINE MIR -63 145 3 934 207 122 89 chr2 15556486 15556878 -235130976 - MLT1G1 LTR MaLR -98 497 93 2062 145 58 32 chr2 15557079 15557615 -235130239 - MLT2A2 LTR ERVL 0 554 3 199 364 82 0 chr2 15557620 15557730 -235130124 - L2 LINE L2 -575 2739 2621 289 319 64 0 chr2 15558342 15558436 -235129418 - MLT1G1 LTR MaLR -489 106 7 1587 230 49 37 chr2 15558523 15558592 -235129262 - MER119 DNA MER1_type -38 545 478 216 0 0 0 chr2 15558592 15558616 -235129238 + (TA)n Simple_repeat Simple_repeat 1 24 0 1587 230 49 37 chr2 15558616 15558983 -235128871 - MER119 DNA MER1_type -105 478 71 2185 130 10 0 chr2 15558983 15559291 -235128563 + AluSq SINE Alu 1 311 -2 1587 230 49 37 chr2 15559291 15559363 -235128491 - MER119 DNA MER1_type -512 71 1 2390 103 0 0 chr2 15559808 15560109 -235127745 + AluSx SINE Alu 2 302 -10 2767 128 25 11 chr2 15561276 15561395 -235126459 - L1PA16 LINE L1 0 6166 6050 2589 44 0 0 chr2 15561395 15561691 -235126163 - AluY SINE Alu -15 296 1 2767 128 25 11 chr2 15561691 15562016 -235125838 - L1PA16 LINE L1 -116 6050 5716 201 125 125 0 chr2 15562021 15562061 -235125793 - MIR SINE MIR -62 146 102 2117 127 0 0 chr2 15563220 15563526 -235124328 - AluSq SINE Alu 0 306 1 200 139 0 23 chr2 15563815 15563858 -235123996 + (TCC)n Simple_repeat Simple_repeat 1 42 0 234 108 0 0 chr2 15563912 15563949 -235123905 - MIR SINE MIR -67 141 105 191 397 25 0 chr2 15564150 15564271 -235123583 + MIR SINE MIR 114 237 -25 1116 236 63 0 chr2 15564305 15564542 -235123312 + MIR SINE MIR 10 261 -1 1408 179 103 19 chr2 15564693 15564956 -235122898 + AluJo SINE Alu 1 285 -27 280 333 99 58 chr2 15565034 15565346 -235122508 - L2 LINE L2 -6 3266 2942 281 338 63 46 chr2 15566110 15566357 -235121497 + MIR3 SINE MIR 5 253 -9 299 299 112 19 chr2 15566452 15566559 -235121295 - L2 LINE L2 0 3272 3156 2537 107 13 16 chr2 15566796 15567170 -235120684 - THE1C LTR MaLR -2 373 1 4359 131 33 11 chr2 15567170 15567903 -235119951 - THE1C-int LTR MaLR 0 1580 832 193 315 55 0 chr2 15568612 15568685 -235119169 - MIR3 SINE MIR -9 199 123 1755 186 9 25 chr2 15568719 15569042 -235118812 - 7SLRNA srpRNA srpRNA -1 319 2 671 226 66 104 chr2 15569079 15569367 -235118487 - L2 LINE L2 0 3313 3037 2422 105 0 0 chr2 15569492 15569798 -235118056 + AluSg SINE Alu 1 306 -4 238 290 41 94 chr2 15569875 15569902 -235117952 + MIR SINE MIR 8 35 -227 2226 110 0 7 chr2 15569902 15570194 -235117660 + AluSx SINE Alu 1 290 -22 238 290 41 94 chr2 15570194 15570228 -235117626 + MIR SINE MIR 35 69 -193 2455 84 3 0 chr2 15570228 15570527 -235117327 + AluSp SINE Alu 1 300 -13 238 290 41 94 chr2 15570527 15570656 -235117198 + MIR SINE MIR 69 186 -76 1668 179 11 7 chr2 15570656 15570941 -235116913 - AluJb SINE Alu -26 286 1 238 290 41 94 chr2 15570941 15570993 -235116861 + MIR SINE MIR 186 239 -23 298 305 63 42 chr2 15571773 15571935 -235115919 + MIR3 SINE MIR 20 187 -21 1740 201 0 79 chr2 15572011 15572172 -235115682 + MSTD LTR MaLR 3 175 -221 4991 96 39 0 chr2 15572172 15572837 -235115017 + LTR8 LTR ERV1 1 691 0 1740 201 0 79 chr2 15572837 15573021 -235114833 + MSTD LTR MaLR 175 310 -86 2465 87 3 0 chr2 15573021 15573333 -235114521 + AluSp SINE Alu 1 313 0 1740 201 0 79 chr2 15573333 15573414 -235114440 + MSTD LTR MaLR 310 396 0 337 316 66 0 chr2 15573419 15573555 -235114299 + MIR SINE MIR 47 191 -71 205 281 31 0 chr2 15573749 15573813 -235114041 + L2 LINE L2 3246 3311 -2 274 165 72 124 chr2 15574780 15574840 -235113014 - MER81 DNA DNA 0 114 59 2228 114 3 0 chr2 15574840 15575147 -235112707 + AluSx SINE Alu 1 308 -4 274 165 72 124 chr2 15575147 15575183 -235112671 - MER81 DNA DNA -55 59 23 2321 100 3 0 chr2 15575749 15576060 -235111794 + AluSx SINE Alu 1 312 0 2222 108 3 0 chr2 15576941 15577259 -235110595 + AluSq SINE Alu 1 319 0 878 210 0 31 chr2 15578250 15578408 -235109446 + AluSg/x SINE Alu 120 272 -38 19988 51 3 1 chr2 15578408 15581679 -235106175 + L1PA5 LINE L1 2875 6149 -5 878 210 0 31 chr2 15581679 15581715 -235106139 + AluSg/x SINE Alu 272 308 -2 317 161 81 0 chr2 15581739 15581801 -235106053 + MER5B DNA MER1_type 109 175 -3 285 362 43 5 chr2 15581829 15582014 -235105840 + L2 LINE L2 2275 2466 -848 432 263 206 19 chr2 15582504 15582713 -235105141 + MIR SINE MIR 7 254 -8 2024 139 0 23 chr2 15582716 15583018 -235104836 - AluJb SINE Alu -17 295 1 24 0 0 0 chr2 15583024 15583048 -235104806 + AT_rich Low_complexity Low_complexity 1 24 0 239 263 124 15 chr2 15583278 15583415 -235104439 + MIR SINE MIR 45 196 -66 185 281 70 0 chr2 15583477 15583534 -235104320 - MIR SINE MIR -65 197 137 1593 212 107 21 chr2 15584320 15584750 -235103104 - MLT1C LTR MaLR 0 467 1 2604 51 0 0 chr2 15584770 15585066 -235102788 - AluY SINE Alu -15 296 1 334 293 70 38 chr2 15585069 15585226 -235102628 - L2 LINE L2 -10 3262 3101 2128 144 0 6 chr2 15585541 15585854 -235102000 - AluSx SINE Alu -1 311 1 234 274 169 31 chr2 15587063 15587214 -235100640 + MIR SINE MIR 1 156 -65 5537 135 37 47 chr2 15587286 15588053 -235099801 - Tigger1 DNA MER2_type -1406 1012 256 2537 81 10 0 chr2 15588053 15588363 -235099491 + AluSq SINE Alu 1 313 0 5537 135 37 47 chr2 15588363 15588616 -235099238 - Tigger1 DNA MER2_type -2162 256 2 269 317 29 19 chr2 15589384 15589488 -235098366 + MIR SINE MIR 30 134 -74 1701 194 10 0 chr2 15589710 15590004 -235097850 + AluJb SINE Alu 1 297 -15 208 348 104 26 chr2 15590644 15590759 -235097095 + MIR3 SINE MIR 7 130 -78 2082 148 3 0 chr2 15590763 15591073 -235096781 - AluSx SINE Alu -1 311 1 346 231 29 29 chr2 15591333 15591437 -235096417 + MIR SINE MIR 49 152 -110 840 180 0 103 chr2 15592564 15592641 -235095213 - MER3 DNA MER1_type 0 209 126 2145 131 28 47 chr2 15592641 15592905 -235094949 + L1MB4 LINE L1 5758 6012 -168 1229 83 193 0 chr2 15592905 15593097 -235094757 - MER30 DNA MER1_type 0 230 2 2145 131 28 47 chr2 15593097 15593261 -235094593 + L1MB4 LINE L1 6012 6178 -2 840 180 0 103 chr2 15593261 15593416 -235094438 - MER3 DNA MER1_type -83 126 1 446 259 40 75 chr2 15594602 15594776 -235093078 - MIR3 SINE MIR -5 203 36 1737 129 4 0 chr2 15594847 15595088 -235092766 - AluSq SINE Alu -14 299 58 1768 101 8 8 chr2 15595089 15595327 -235092527 - AluSx SINE Alu -74 238 1 29 28 0 0 chr2 15595416 15595452 -235092402 + AT_rich Low_complexity Low_complexity 1 36 0 2470 87 0 0 chr2 15595462 15595760 -235092094 + AluY SINE Alu 1 298 -13 360 328 86 11 chr2 15595797 15595983 -235091871 + MIR SINE MIR 20 219 -43 313 297 34 23 chr2 15596226 15596374 -235091480 + MIR SINE MIR 1 144 -67 2313 107 7 0 chr2 15596576 15596875 -235090979 - AluSx SINE Alu -11 301 1 231 297 57 97 chr2 15597186 15597361 -235090493 - L3 LINE CR1 -14 1563 1396 227 100 0 25 chr2 15597386 15597426 -235090428 + (TTTTC)n Simple_repeat Simple_repeat 3 41 0 825 189 0 0 chr2 15597431 15597563 -235090291 - FLAM_C SINE Alu -1 132 1 1983 157 0 13 chr2 15597567 15597880 -235089974 - AluJb SINE Alu -1 311 3 866 253 64 40 chr2 15597962 15598232 -235089622 - MIR SINE MIR 0 262 9 2303 116 3 0 chr2 15598728 15599039 -235088815 - AluSx SINE Alu 0 312 1 261 0 0 0 chr2 15599112 15599141 -235088713 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2245 90 7 0 chr2 15599143 15599422 -235088432 - AluSq SINE Alu -31 282 2 181 208 19 75 chr2 15599741 15599794 -235088060 + L2 LINE L2 3241 3290 -23 209 56 0 56 chr2 15601997 15602033 -235085821 + (TCTCCC)n Simple_repeat Simple_repeat 4 37 0 198 270 0 0 chr2 15602059 15602133 -235085721 + (TG)n Simple_repeat Simple_repeat 1 74 0 529 197 0 22 chr2 15603111 15603294 -235084560 + (TG)n Simple_repeat Simple_repeat 2 180 0 540 204 0 0 chr2 15603322 15603498 -235084356 + (TG)n Simple_repeat Simple_repeat 2 177 0 605 193 0 6 chr2 15603515 15603696 -235084158 + (TG)n Simple_repeat Simple_repeat 1 180 0 537 217 0 0 chr2 15603707 15603887 -235083967 + (TG)n Simple_repeat Simple_repeat 1 180 0 1947 132 0 0 chr2 15604782 15605054 -235082800 - AluSq SINE Alu -24 289 18 479 314 52 13 chr2 15605079 15605232 -235082622 - MIR SINE MIR -12 250 92 2242 91 13 17 chr2 15605865 15606163 -235081691 - AluSx SINE Alu -15 297 1 339 267 104 7 chr2 15606251 15606386 -235081468 + MIR3 SINE MIR 54 201 -7 918 127 0 0 chr2 15606883 15607041 -235080813 + (CA)n Simple_repeat Simple_repeat 1 158 0 2394 96 0 0 chr2 15607063 15607364 -235080490 + AluSg SINE Alu 1 301 -9 339 277 32 0 chr2 15607692 15607786 -235080068 - MIR3 SINE MIR -5 203 107 1549 219 58 11 chr2 15608357 15608704 -235079150 + MLT1A1 LTR MaLR 1 363 -2 2201 118 0 3 chr2 15608708 15609014 -235078840 - AluSx SINE Alu -7 305 1 281 293 0 13 chr2 15609041 15609116 -235078738 - MIR SINE MIR -63 145 72 296 268 60 104 chr2 15609465 15609648 -235078206 + MIR SINE MIR 77 251 -11 2342 107 0 0 chr2 15609990 15610290 -235077564 - AluSx SINE Alu -10 302 3 339 236 0 14 chr2 15610317 15610389 -235077465 + MIR SINE MIR 79 149 -113 963 114 0 0 chr2 15610542 15610673 -235077181 - FLAM_C SINE Alu -2 131 1 213 39 0 0 chr2 15610812 15610838 -235077016 + (GA)n Simple_repeat Simple_repeat 1 26 0 428 247 120 27 chr2 15610839 15610989 -235076865 + MIR SINE MIR 8 171 -91 312 302 0 0 chr2 15611468 15611554 -235076300 + MIR3 SINE MIR 114 199 -9 933 159 7 7 chr2 15611874 15612102 -235075752 + CT-rich Low_complexity Low_complexity 1 228 -339 2362 103 0 13 chr2 15612102 15612413 -235075441 - AluSp SINE Alu -6 307 1 933 159 7 7 chr2 15612413 15612441 -235075413 + CT-rich Low_complexity Low_complexity 227 567 0 2063 154 10 0 chr2 15612441 15612747 -235075107 - AluSx SINE Alu -3 309 1 360 152 0 0 chr2 15612906 15612972 -235074882 + GA-rich Low_complexity Low_complexity 1 66 0 2005 113 0 0 chr2 15613083 15613348 -235074506 + AluSx SINE Alu 5 269 -43 189 0 0 0 chr2 15613375 15613396 -235074458 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 181 343 55 14 chr2 15613722 15613795 -235074059 - L2 LINE L2 -39 3274 3199 294 361 68 8 chr2 15614000 15614133 -235073721 + L2 LINE L2 3124 3264 -8 253 287 93 46 chr2 15614135 15614243 -235073611 - MIR SINE MIR -75 133 21 721 134 29 29 chr2 15614409 15614581 -235073273 + CT-rich Low_complexity Low_complexity 3 174 0 747 180 0 180 chr2 15614651 15614901 -235072953 - AluSp SINE Alu -107 206 2 1755 123 8 0 chr2 15614954 15615198 -235072656 + AluSx SINE Alu 53 298 -14 252 345 88 9 chr2 15615343 15615456 -235072398 - MIR3 SINE MIR -43 165 44 369 43 0 0 chr2 15615471 15615518 -235072336 + (CA)n Simple_repeat Simple_repeat 2 48 0 354 271 47 0 chr2 15616202 15616309 -235071545 - MIR SINE MIR -59 203 92 262 258 237 0 chr2 15616599 15616692 -235071162 + L2 LINE L2 3158 3272 0 * 326 299 95 47 chr2 15616681 15616892 -235070962 - L2 LINE L2 -15 3257 3037 276 256 98 112 chr2 15616866 15617143 -235070711 + L3 LINE CR1 1268 1540 -37 * 2214 126 7 0 chr2 15617172 15617481 -235070373 - AluSp SINE Alu 0 313 3 189 276 0 17 chr2 15618054 15618112 -235069742 - MIR SINE MIR -67 141 85 227 288 0 27 chr2 15618401 15618474 -235069380 - L2 LINE L2 -215 3057 2987 408 269 30 0 chr2 15618482 15618754 -235069100 + (TCCA)n Simple_repeat Simple_repeat 1 280 0 231 224 28 0 chr2 15618774 15618881 -235068973 + (TCCA)n Simple_repeat Simple_repeat 1 110 0 301 225 33 0 chr2 15618896 15619047 -235068807 + (TCCA)n Simple_repeat Simple_repeat 1 156 0 398 258 67 8 chr2 15619102 15619222 -235068632 - MIR SINE MIR -16 246 120 217 360 96 45 chr2 15619314 15619628 -235068226 + L2 LINE L2 2622 2951 -363 1830 194 35 30 chr2 15620201 15620573 -235067281 + MLT1A2 LTR MaLR 1 374 0 229 336 77 0 chr2 15620996 15621100 -235066754 + MIR SINE MIR 33 144 -64 736 205 0 0 chr2 15621406 15621528 -235066326 + AluJo SINE Alu 2 123 -189 186 133 0 0 chr2 15621529 15621559 -235066295 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 1068 193 5 0 chr2 15621570 15621757 -235066097 + AluJo SINE Alu 118 305 -7 222 152 0 65 chr2 15622207 15622253 -235065601 + MIR SINE MIR 210 252 -10 * 300 136 0 0 chr2 15622225 15622269 -235065585 + L2 LINE L2 3270 3313 0 208 143 29 0 chr2 15622715 15622750 -235065104 + GA-rich Low_complexity Low_complexity 1 36 0 369 142 39 39 chr2 15622761 15622916 -235064938 + (CAGAGA)n Simple_repeat Simple_repeat 2 156 0 213 320 48 63 chr2 15623914 15624120 -235063734 + L2 LINE L2 2637 2839 -475 1499 165 8 8 chr2 15625654 15625902 -235061952 + AluJo SINE Alu 33 280 -32 369 306 98 6 chr2 15626078 15626251 -235061603 + MIR SINE MIR 74 262 0 352 199 114 121 chr2 15626648 15626814 -235061040 + MIR SINE MIR 19 183 -79 522 57 0 0 chr2 15627139 15627209 -235060645 + (TTTC)n Simple_repeat Simple_repeat 4 73 0 244 145 0 48 chr2 15627212 15627274 -235060580 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 1186 77 6 17 chr2 15627274 15627455 -235060399 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1921 151 4 0 chr2 15627456 15627734 -235060120 - AluSx SINE Alu -33 279 1 422 268 183 0 chr2 15627980 15628133 -235059721 + MER5A DNA MER1_type 9 189 0 384 226 9 52 chr2 15628937 15629052 -235058802 - Charlie2 DNA MER1_type -2634 148 39 432 288 30 15 chr2 15629081 15629213 -235058641 - MIR SINE MIR -20 242 109 231 152 38 25 chr2 15629581 15629660 -235058194 + CT-rich Low_complexity Low_complexity 2 81 0 252 305 0 0 chr2 15630064 15630123 -235057731 + L2 LINE L2 3209 3267 -5 2232 125 3 6 chr2 15630349 15630662 -235057192 + AluSx SINE Alu 1 312 0 250 296 148 0 chr2 15630679 15630794 -235057060 + MIR SINE MIR 2 133 -129 221 305 86 19 chr2 15631000 15631105 -235056749 - MIR SINE MIR -74 134 23 274 377 31 8 chr2 15631168 15631298 -235056556 + MIR3 SINE MIR 70 202 -6 261 264 25 83 chr2 15631439 15631560 -235056294 + L2 LINE L2 3151 3264 -8 805 257 8 9 chr2 15631771 15631986 -235055868 - MIR SINE MIR -6 256 42 433 229 53 23 chr2 15631974 15632105 -235055749 - MIR SINE MIR -19 243 109 * 576 200 15 37 chr2 15632184 15632319 -235055535 + MIR SINE MIR 19 150 -112 21 0 0 0 chr2 15632775 15632796 -235055058 + AT_rich Low_complexity Low_complexity 1 21 0 187 336 8 69 chr2 15633040 15633171 -235054683 - L2 LINE L2 -5 3308 3186 190 266 125 0 chr2 15633240 15633304 -235054550 + MIR SINE MIR 84 155 -107 945 248 81 0 chr2 15633307 15633529 -235054325 + MIR SINE MIR 2 241 -21 207 280 65 19 chr2 15633550 15633657 -235054197 + MIR SINE MIR 148 259 -3 623 259 24 6 chr2 15633739 15633909 -235053945 + MER5B DNA MER1_type 3 175 -3 1918 132 63 0 chr2 15633953 15634240 -235053614 - AluSx SINE Alu -7 305 1 729 295 106 73 chr2 15634313 15635033 -235052821 - L2 LINE L2 -9 3304 2499 2193 126 19 43 chr2 15635033 15635406 -235052448 - THE1B LTR MaLR 0 364 1 729 295 106 73 chr2 15635406 15635736 -235052118 - L2 LINE L2 -814 2499 2181 321 336 0 8 chr2 15636192 15636311 -235051543 + MIR3 SINE MIR 70 187 -21 379 239 68 34 chr2 15636759 15636876 -235050978 - L1MC5 LINE L1 -910 7051 6931 308 242 105 52 chr2 15636843 15636905 -235050949 - L1MC4 LINE L1 -969 7073 7016 * 2148 128 23 0 chr2 15636905 15637210 -235050644 - AluSx SINE Alu 0 312 1 308 242 105 52 chr2 15637210 15637235 -235050619 - L1MC4 LINE L1 -1026 7016 6994 1910 109 0 8 chr2 15637235 15637492 -235050362 - AluSg SINE Alu -6 304 50 308 242 105 52 chr2 15637492 15637556 -235050298 - L1MC4 LINE L1 -1048 6994 6913 420 250 158 8 chr2 15637561 15637681 -235050173 - MIR SINE MIR -71 191 54 246 309 136 0 chr2 15637940 15638050 -235049804 - L2 LINE L2 -239 3033 2909 24 32 0 0 chr2 15638402 15638433 -235049421 + AT_rich Low_complexity Low_complexity 1 31 0 245 250 147 22 chr2 15638469 15638605 -235049249 + L1ME4a LINE L1 5636 5788 -333 1862 177 7 0 chr2 15638682 15638992 -235048862 - AluJb SINE Alu 0 312 1 300 196 196 38 chr2 15639109 15639242 -235048612 + L1ME4a LINE L1 5967 6120 -1 243 333 57 57 chr2 15640718 15640877 -235046977 - L2 LINE L2 -2 3270 3112 217 323 118 11 chr2 15641439 15641532 -235046322 - L2 LINE L2 -1 3271 3169 740 161 25 0 chr2 15641717 15641835 -235046019 - FLAM_C SINE Alu -11 122 2 1976 140 0 7 chr2 15642053 15642353 -235045501 - AluSx SINE Alu -14 298 1 2356 110 0 0 chr2 15642563 15642872 -235044982 - AluSx SINE Alu -3 309 1 218 157 20 20 chr2 15643888 15643939 -235043915 + (GAGTG)n Simple_repeat Simple_repeat 1 51 0 191 271 157 0 chr2 15643992 15644062 -235043792 + MIR3 SINE MIR 127 207 -1 614 329 69 0 chr2 15644080 15644369 -235043485 + L1ME4a LINE L1 5566 5874 -247 1914 147 35 0 chr2 15644572 15644857 -235042997 + AluJb SINE Alu 11 305 -7 296 273 127 33 chr2 15646841 15646991 -235040863 - MIR3 SINE MIR -29 179 16 297 208 26 11 chr2 15848641 15848750 -234839104 - AluJ/monomer SINE Alu -256 46 2 2285 82 0 10 chr2 15848980 15849284 -234838570 - AluSx SINE Alu -11 301 1 231 197 28 70 chr2 15849692 15849763 -234838091 + MIR SINE MIR 54 122 -86 310 239 18 64 chr2 15850269 15850378 -234837476 + MIR SINE MIR 43 146 -116 2266 91 0 3 chr2 15850388 15850697 -234837157 - AluSg SINE Alu -2 308 1 202 274 0 0 chr2 15850887 15850938 -234836916 + (TG)n Simple_repeat Simple_repeat 1 51 0 499 325 69 35 chr2 15851288 15851722 -234836132 + L1ME4a LINE L1 5293 5754 -367 1704 147 63 0 chr2 15851722 15852007 -234835847 + AluSx SINE Alu 6 308 -4 499 325 69 35 chr2 15852007 15852169 -234835685 + L1ME4a LINE L1 5754 5909 -212 665 314 114 29 chr2 15853615 15853696 -234834158 + L2 LINE L2 2521 2594 -719 1968 176 52 6 chr2 15853696 15854043 -234833811 + MLT1A1 LTR MaLR 1 363 -2 665 314 114 29 chr2 15854043 15854439 -234833415 + L2 LINE L2 2594 3046 -267 1864 126 0 0 chr2 15854547 15854816 -234833038 + AluSx SINE Alu 2 270 -42 1697 132 0 45 chr2 15855133 15855267 -234832587 + AluJo SINE Alu 9 147 -163 2095 118 14 0 chr2 15855267 15855563 -234832291 + AluSq SINE Alu 2 301 -12 1697 132 0 45 chr2 15855563 15855743 -234832111 + AluJo SINE Alu 147 310 0 216 319 29 14 chr2 15855777 15855846 -234832008 - MIR3 SINE MIR -126 82 13 22 0 0 0 chr2 15855915 15855937 -234831917 + AT_rich Low_complexity Low_complexity 1 22 0 261 247 47 24 chr2 15856881 15856966 -234830888 - MIR SINE MIR -80 128 42 1571 120 12 4 chr2 15858055 15858297 -234829557 + AluJo SINE Alu 63 306 -6 283 335 42 42 chr2 15858730 15858897 -234828957 + MIR3 SINE MIR 33 199 -9 617 212 66 100 chr2 15859297 15859556 -234828298 - MIR SINE MIR 0 262 13 210 346 56 0 chr2 15859708 15859815 -234828039 - L2 LINE L2 0 3272 3160 248 281 16 0 chr2 15859821 15859885 -234827969 - L3 LINE CR1 -174 1403 1339 345 234 37 19 chr2 15859900 15860007 -234827847 + MER94 DNA DNA 18 126 -8 243 306 48 20 chr2 15860051 15860198 -234827656 - L3 LINE CR1 -298 1279 1129 220 328 164 35 chr2 15860602 15860919 -234826935 - L2 LINE L2 -88 3184 2827 208 297 178 10 chr2 15861622 15861723 -234826131 + MIR SINE MIR 40 157 -105 206 325 65 13 chr2 15861725 15861802 -234826052 + MIR SINE MIR 117 197 -65 303 316 85 17 chr2 15862106 15862283 -234825571 + L2 LINE L2 2708 2896 -418 313 260 80 20 chr2 15862745 15862845 -234825009 - MIR SINE MIR -93 169 64 543 256 16 8 chr2 15863831 15863960 -234823894 - MIR SINE MIR -113 149 20 305 336 67 0 chr2 15864226 15864345 -234823509 + L2 LINE L2 3146 3272 0 281 244 139 29 chr2 15865082 15865254 -234822600 + L1ME LINE L1 5592 5782 -339 1963 139 0 0 chr2 15865328 15865629 -234822225 - AluSq SINE Alu -12 301 1 358 219 55 202 chr2 15865831 15866178 -234821676 - L2 LINE L2 -20 3252 2957 2066 115 20 0 chr2 15866521 15866825 -234821029 - AluSg SINE Alu 0 310 1 408 333 213 30 chr2 15866929 15867247 -234820607 - L2 LINE L2 -415 2899 2641 1738 165 0 32 chr2 15867247 15867556 -234820298 + AluJo SINE Alu 1 299 -13 408 333 213 30 chr2 15867556 15868176 -234819678 - L2 LINE L2 -673 2641 1789 1389 205 106 54 chr2 15868483 15868927 -234818927 - MLT1C LTR MaLR 0 467 1 180 0 0 0 chr2 15869612 15869632 -234818222 + (TTGG)n Simple_repeat Simple_repeat 1 20 0 880 153 0 0 chr2 15869634 15869765 -234818089 - FRAM SINE Alu -23 153 23 213 39 0 0 chr2 15870317 15870343 -234817511 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 251 114 23 0 chr2 15870363 15870407 -234817447 + CT-rich Low_complexity Low_complexity 4 48 0 226 250 196 11 chr2 15870651 15870743 -234817111 + MIR SINE MIR 20 128 -80 211 217 0 22 chr2 15870847 15870893 -234816961 + L2 LINE L2 3265 3309 -4 2221 67 7 0 chr2 15871332 15871645 -234816209 + AluSp SINE Alu 1 315 0 222 150 0 0 chr2 15871666 15871706 -234816148 + (TTCCC)n Simple_repeat Simple_repeat 2 41 0 374 274 196 17 chr2 15872277 15872456 -234815398 + MIR SINE MIR 49 259 -3 2155 125 0 3 chr2 15874016 15874329 -234813525 - AluSx SINE Alu 0 312 1 2269 57 0 0 chr2 15874356 15874688 -234813166 - AluY SINE Alu 0 332 1 1651 187 0 10 chr2 15875384 15875689 -234812165 - AluJb SINE Alu -10 302 1 843 134 15 22 chr2 15876768 15876902 -234810952 + FLAM_C SINE Alu 1 133 0 4017 196 18 54 chr2 15876946 15877584 -234810270 - L1MB5 LINE L1 -36 6138 5479 2125 110 3 10 chr2 15877584 15877894 -234809960 - AluSq SINE Alu -3 310 3 4017 196 18 54 chr2 15877894 15878109 -234809745 - L1MB5 LINE L1 -695 5479 5258 1770 162 7 0 chr2 15878109 15878399 -234809455 - AluSx SINE Alu -20 292 1 4017 196 18 54 chr2 15878399 15878749 -234809105 - L1MB5 LINE L1 -916 5258 4964 622 264 38 50 chr2 15879138 15879399 -234808455 - MER46C DNA MER2_type -1 337 80 1175 142 16 129 chr2 15879433 15879743 -234808111 - AluJb SINE Alu -14 298 24 939 159 0 2 chr2 15879751 15879990 -234807864 - AluJb SINE Alu -8 304 22 261 0 0 0 chr2 15880006 15880035 -234807819 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2064 107 0 0 chr2 15880036 15880316 -234807538 - AluSx SINE Alu -32 280 1 231 169 73 140 chr2 15882337 15882515 -234805339 - L2 LINE L2 -190 3082 2917 317 206 21 202 chr2 15882570 15882636 -234805218 - L1MC4 LINE L1 0 8042 7966 2105 112 7 0 chr2 15882636 15882930 -234804924 - AluSx SINE Alu -16 296 1 317 206 21 202 chr2 15882930 15883106 -234804748 - L1MC4 LINE L1 -76 7966 7844 478 304 37 19 chr2 15883281 15883442 -234804412 - MIR SINE MIR -77 185 22 2005 125 3 28 chr2 15883446 15883766 -234804088 - AluSx SINE Alu 0 312 1 2025 132 0 3 chr2 15883768 15884072 -234803782 - AluSx SINE Alu -8 304 2 354 234 69 86 chr2 15884404 15884579 -234803275 + MIR SINE MIR 61 232 -30 475 262 39 0 chr2 15884810 15884913 -234802941 + L2 LINE L2 3199 3305 -8 2175 101 0 0 chr2 15884921 15885208 -234802646 + AluSq SINE Alu 8 294 -19 573 285 93 36 chr2 15885455 15885530 -234802324 - MLT1I LTR MaLR 0 409 340 1396 195 3 25 chr2 15885530 15885848 -234802006 + AluJo SINE Alu 2 312 0 573 285 93 36 chr2 15885848 15886074 -234801780 - MLT1I LTR MaLR -69 340 91 221 276 112 0 chr2 15886240 15886338 -234801516 - MIR3 SINE MIR -2 206 98 861 173 0 0 chr2 15886429 15886579 -234801275 + FRAM SINE Alu 12 161 -15 221 323 85 80 chr2 15886667 15886868 -234800986 - L2 LINE L2 -40 3232 3031 296 314 29 44 chr2 15887185 15887366 -234800488 - MIR SINE MIR -67 141 3 224 228 18 18 chr2 15887481 15887538 -234800316 + L2 LINE L2 3256 3312 -1 2140 121 0 0 chr2 15887657 15887964 -234799890 - AluY SINE Alu -4 307 1 247 336 84 17 chr2 15888020 15888139 -234799715 + MIR SINE MIR 49 175 -87 234 311 219 12 chr2 15888254 15888418 -234799436 + MIR SINE MIR 6 203 -59 235 208 0 0 chr2 15888830 15888883 -234798971 - MER91A DNA MER1_type -143 53 1 381 330 32 80 chr2 15889970 15890370 -234797484 - L2 LINE L2 -19 3253 2873 204 172 31 31 chr2 15890612 15890676 -234797178 + A-rich Low_complexity Low_complexity 6 69 0 2183 113 0 0 chr2 15890681 15890981 -234796873 + AluSx SINE Alu 1 300 -12 1030 215 14 14 chr2 15891241 15891460 -234796394 + MER20 DNA MER1_type 1 219 0 730 192 96 59 chr2 15891568 15891823 -234796031 + MLT1A2 LTR MaLR 1 351 -23 325 102 70 173 chr2 15892826 15892980 -234794874 - MLT1L LTR MaLR 0 577 449 375 225 23 78 chr2 15893314 15893443 -234794411 - MLT1L LTR MaLR -350 265 144 274 188 10 125 chr2 15894276 15894372 -234793482 - MER69 DNA AcHobo -13 2513 2429 1694 204 80 0 chr2 15894377 15894742 -234793112 + MLT2D LTR ERVL 1 444 -20 518 187 0 27 chr2 15894742 15894995 -234792859 + CT-rich Low_complexity Low_complexity 1 246 0 234 295 26 0 chr2 15895054 15895132 -234792722 - MER69 DNA AcHobo -97 80 1 1101 217 66 37 chr2 15897518 15897911 -234789943 + MLT1C LTR MaLR 8 467 0 23 0 0 0 chr2 15898225 15898248 -234789606 + AT_rich Low_complexity Low_complexity 1 23 0 2701 200 65 42 chr2 15898856 15899567 -234788287 - LTR8A LTR ERV1 0 727 1 1459 260 46 8 chr2 15899622 15900126 -234787728 + LTR28 LTR ERV1 1 1232 -131 336 284 37 0 chr2 15900730 15900811 -234787043 - MLT1G LTR MaLR -195 395 312 202 299 58 35 chr2 15901597 15901684 -234786170 + L2 LINE L2 2976 3064 -208 1261 206 8 4 chr2 15901800 15902053 -234785801 - AluJo SINE Alu -58 254 1 490 282 31 57 chr2 15902468 15902695 -234785159 - L2 LINE L2 -865 2449 2229 481 280 150 5 chr2 15902757 15902950 -234784904 + MLT1J LTR MaLR 89 309 -202 1945 224 35 23 chr2 15902958 15903475 -234784379 - MER39 LTR ERV1 0 707 5 2577 108 14 11 chr2 15903600 15903970 -234783884 - THE1C LTR MaLR -4 371 1 35 24 0 0 chr2 15903984 15904026 -234783828 + AT_rich Low_complexity Low_complexity 1 42 0 3335 191 25 47 chr2 15904029 15904853 -234783001 - L1MD2 LINE L1 -384 5975 5176 1734 150 38 0 chr2 15904853 15905146 -234782708 - AluSx SINE Alu -8 304 1 3335 191 25 47 chr2 15905146 15905229 -234782625 - L1MD2 LINE L1 -1183 5176 5093 289 301 157 30 chr2 15905613 15905779 -234782075 - L2 LINE L2 -6 3307 3121 423 232 27 72 chr2 15905893 15906059 -234781795 + MER45A DNA AcHobo 1 145 -33 1878 191 3 11 chr2 15906465 15906816 -234781038 + MER7A DNA MER2_type 1 346 0 252 282 0 51 chr2 15906845 15906923 -234780931 - MIR SINE MIR -118 144 71 300 250 133 8 chr2 15907700 15907828 -234780026 - MIR SINE MIR -100 162 19 281 302 23 12 chr2 15908808 15908894 -234778960 - MIR SINE MIR -118 144 58 231 321 131 0 chr2 15908905 15908989 -234778865 + MIR3 SINE MIR 62 156 -52 320 348 62 0 chr2 15909146 15909258 -234778596 - L2 LINE L2 -18 3254 3136 2098 92 27 0 chr2 15909276 15909570 -234778284 + AluSq SINE Alu 1 302 -11 1436 154 91 18 chr2 15909583 15909869 -234777985 + AluJo SINE Alu 4 310 -2 240 226 118 43 chr2 15909929 15910022 -234777832 + MIR SINE MIR 76 175 -87 601 240 34 28 chr2 15910307 15910486 -234777368 + MIR SINE MIR 13 192 -70 221 234 21 0 chr2 15910614 15910661 -234777193 + C-rich Low_complexity Low_complexity 2 49 0 563 219 35 0 chr2 15910821 15910935 -234776919 + MIR SINE MIR 75 192 -70 1968 117 0 59 chr2 15911303 15911627 -234776227 + AluSg SINE Alu 1 305 -5 255 264 68 96 chr2 15911649 15911742 -234776112 - MIR SINE MIR 0 262 168 1752 166 0 31 chr2 15911742 15911922 -234775932 - AluJo SINE Alu -2 310 143 2209 81 3 7 chr2 15911922 15912230 -234775624 - AluY SINE Alu -4 307 1 1752 166 0 31 chr2 15912230 15912369 -234775485 - AluJo SINE Alu -169 143 1 255 264 68 96 chr2 15912369 15912525 -234775329 - MIR SINE MIR -94 168 20 436 315 72 52 chr2 15913711 15914016 -234773838 + L2 LINE L2 2920 3230 -42 547 211 163 15 chr2 15914040 15914328 -234773526 - MLT1J2 LTR MaLR -22 424 71 222 260 0 0 chr2 15914366 15914416 -234773438 + L3 LINE CR1 1346 1395 -182 215 296 102 87 chr2 15915614 15915802 -234772052 - L2 LINE L2 0 3272 3082 285 306 33 16 chr2 15915802 15915923 -234771931 + MIR3 SINE MIR 3 125 -83 374 196 118 10 chr2 15916072 15916174 -234771680 - MIR3 SINE MIR -31 177 65 370 251 48 78 chr2 15917536 15917625 -234770229 - MER112 DNA MER1_type -7 253 170 2014 136 0 0 chr2 15917625 15917933 -234769921 + AluSx SINE Alu 1 308 -4 370 251 48 78 chr2 15917933 15918010 -234769844 - MER112 DNA MER1_type -90 170 92 263 313 61 9 chr2 15918156 15918271 -234769583 + MIR SINE MIR 89 209 -53 482 284 0 0 chr2 15919362 15919478 -234768376 - MIR SINE MIR -10 252 137 544 219 19 45 chr2 15919510 15919665 -234768189 + MER63 DNA MER1_type 1 777 -59 337 322 41 33 chr2 15919698 15919819 -234768035 - MIR SINE MIR -84 124 3 330 87 0 0 chr2 15919932 15919978 -234767876 + (CACCC)n Simple_repeat Simple_repeat 2 47 0 190 359 57 19 chr2 15920507 15920613 -234767241 - L2 LINE L2 0 3272 3163 * 250 365 112 17 chr2 15920612 15920790 -234767064 + L2 LINE L2 2865 3059 -213 263 310 26 35 chr2 15921244 15921357 -234766497 - MIR3 SINE MIR -9 199 88 363 244 0 106 chr2 15921663 15921786 -234766068 - MER94 DNA DNA -5 129 20 25793 24 0 7 chr2 15921853 15925679 -234762175 - L1PA3 LINE L1 0 6155 2351 12800 46 79 5 chr2 15925679 15927311 -234760543 - L1P LINE L1 -4389 1757 1 1994 128 0 16 chr2 15928322 15928627 -234759227 + AluJb SINE Alu 13 312 0 735 154 0 0 chr2 15928798 15928934 -234758920 + (TCCA)n Simple_repeat Simple_repeat 2 137 0 291 267 95 26 chr2 15928934 15929050 -234758804 - L2 LINE L2 0 3272 3149 1801 163 3 0 chr2 15929312 15929606 -234758248 - AluJb SINE Alu -17 295 1 359 246 52 52 chr2 15929606 15929740 -234758114 + MIR SINE MIR 91 224 -38 211 288 45 0 chr2 15929748 15929814 -234758040 - L2 LINE L2 0 3272 3204 417 271 111 60 chr2 15929958 15930157 -234757697 - MIR SINE MIR -3 259 51 399 214 201 17 chr2 15930544 15930677 -234757177 - FLAM_A SINE Alu -5 128 3 438 20 0 0 chr2 15931251 15931302 -234756552 + (CAG)n Simple_repeat Simple_repeat 1 51 0 228 163 0 0 chr2 15931302 15931345 -234756509 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 383 234 77 163 chr2 15931438 15931647 -234756207 + MER91A DNA MER1_type 1 191 -5 2102 224 8 3 chr2 15932031 15932423 -234755431 - MER70A LTR ERVL 0 472 79 1163 166 9 18 chr2 15932425 15932642 -234755212 - AluJo SINE Alu -14 298 84 422 299 11 48 chr2 15932714 15932901 -234754953 - L2 LINE L2 -3 3310 3131 189 255 78 0 chr2 15933842 15933893 -234753961 - L2 LINE L2 -1 3271 3217 180 301 63 77 chr2 15933997 15934140 -234753714 - L2 LINE L2 -161 3111 2971 232 217 29 58 chr2 15934648 15934717 -234753137 + MIR3 SINE MIR 119 185 -23 230 294 59 25 chr2 15934901 15935020 -234752834 - MIR SINE MIR -68 140 18 211 343 110 23 chr2 15936701 15936920 -234750934 - MIR SINE MIR -16 246 9 225 333 30 20 chr2 15937403 15937502 -234750352 - MIR SINE MIR -22 240 141 2453 198 11 19 chr2 15937872 15938346 -234749508 + MER82 DNA MER2_type 1 470 -183 853 143 0 7 chr2 15938350 15938490 -234749364 + FLAM_C SINE Alu 1 139 -4 565 311 67 0 chr2 15938492 15938672 -234749182 + MER82 DNA MER2_type 447 638 -15 234 0 0 0 chr2 15939799 15939825 -234748029 + (T)n Simple_repeat Simple_repeat 1 26 0 246 295 86 19 chr2 15940270 15940375 -234747479 + MIR SINE MIR 24 135 -73 258 284 27 0 chr2 15941639 15941713 -234746141 - MIR3 SINE MIR -21 187 112 283 287 47 33 chr2 15942061 15942211 -234745643 + MIR3 SINE MIR 20 171 -37 1014 254 35 19 chr2 15943027 15943283 -234744571 - MIR SINE MIR 0 262 3 346 302 149 27 chr2 15944525 15944747 -234743107 - MIR SINE MIR 0 262 14 383 294 118 18 chr2 15945672 15945842 -234742012 + MIR SINE MIR 72 258 -4 4202 160 24 21 chr2 15945882 15946602 -234741252 + MER72 LTR ERV1 1 722 0 2816 242 15 23 chr2 15946764 15947208 -234740646 + MER82 DNA MER2_type 5 444 -209 9310 112 6 0 chr2 15947208 15948487 -234739367 + HSMAR1 DNA Mariner 1 1287 0 2816 242 15 23 chr2 15948487 15948696 -234739158 + MER82 DNA MER2_type 444 653 0 187 350 92 6 chr2 15948758 15948921 -234738933 - L2 LINE L2 -1903 1411 1235 189 0 0 0 chr2 15949134 15949155 -234738699 + (A)n Simple_repeat Simple_repeat 1 21 0 497 276 147 0 chr2 15949536 15949692 -234738162 + MER5A DNA MER1_type 10 188 -1 974 239 96 96 chr2 15950529 15951465 -234736389 - L1ME4a LINE L1 -12 6109 5170 2032 154 0 0 chr2 15953236 15953541 -234734313 + AluSx SINE Alu 1 305 -7 312 256 65 53 chr2 15955948 15956220 -234731634 - L1ME LINE L1 -551 5570 5297 388 299 46 31 chr2 15956598 15956792 -234731062 + MER117 DNA MER1_type 1 197 0 261 271 139 33 chr2 15956814 15956936 -234730918 - MIR3 SINE MIR -52 156 22 218 180 20 20 chr2 15957421 15957471 -234730383 + (TTAA)n Simple_repeat Simple_repeat 2 51 0 288 327 71 9 chr2 15957705 15957818 -234730036 - L2 LINE L2 -13 3259 3140 2295 115 0 3 chr2 15957839 15958153 -234729701 + AluSq SINE Alu 1 313 0 461 113 0 0 chr2 15958188 15958250 -234729604 - L1PA16 LINE L1 -95 6071 6010 394 116 130 0 chr2 15958250 15958315 -234729539 + L1PA16 LINE L1 6078 6155 -11 1783 174 3 3 chr2 15958377 15958670 -234729184 - AluJb SINE Alu -16 296 4 326 180 16 0 chr2 15958710 15958771 -234729083 - MER2 DNA MER2_type -16 329 268 1146 168 14 5 chr2 15958798 15959007 -234728847 - MER2 DNA MER2_type -134 211 1 546 236 93 33 chr2 15959737 15959919 -234727935 + MIR SINE MIR 68 260 -2 262 309 21 10 chr2 15960005 15960102 -234727752 + MIR3 SINE MIR 99 196 -12 4012 190 62 23 chr2 15960323 15961143 -234726711 + MER21B LTR ERV1 1 852 -11 38 51 0 0 chr2 15961606 15961665 -234726189 + AT_rich Low_complexity Low_complexity 1 59 0 284 264 118 56 chr2 15961682 15961826 -234726028 - MIR SINE MIR -18 244 92 250 271 17 0 chr2 15962500 15962559 -234725295 + C-rich Low_complexity Low_complexity 1 60 0 224 325 174 58 chr2 15962559 15962972 -234724882 - L2 LINE L2 -5 3267 2807 327 318 82 15 chr2 15963668 15963863 -234723991 - MIR SINE MIR -26 236 29 186 296 19 19 chr2 15963926 15963980 -234723874 + MIR SINE MIR 17 70 -192 186 289 72 41 chr2 15964010 15964107 -234723747 + MIR SINE MIR 163 262 0 417 247 112 18 chr2 15964728 15964898 -234722956 - MIR SINE MIR -71 191 6 1847 180 7 0 chr2 15965440 15965740 -234722114 - AluJb SINE Alu -10 302 1 387 0 0 0 chr2 15965743 15965786 -234722068 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 2152 91 4 4 chr2 15965790 15966066 -234721788 - AluSx SINE Alu -24 288 13 859 243 0 20 chr2 15966135 15966337 -234721517 + MER3 DNA MER1_type 12 209 0 26 30 0 0 chr2 15967338 15967371 -234720483 + AT_rich Low_complexity Low_complexity 1 33 0 1128 206 0 0 chr2 15967912 15968101 -234719753 + MER5A DNA MER1_type 1 189 0 2171 121 7 0 chr2 15968136 15968433 -234719421 + AluSx SINE Alu 1 299 -13 215 355 125 34 chr2 15968439 15968760 -234719094 - L2 LINE L2 -568 2746 2397 2220 117 10 0 chr2 15969271 15969578 -234718276 - AluSx SINE Alu -2 310 1 362 280 17 42 chr2 15969578 15969685 -234718169 - MIR3 SINE MIR -10 198 93 543 323 12 36 chr2 15969801 15970052 -234717802 - MIR SINE MIR -17 245 1 345 306 127 52 chr2 15970180 15970353 -234717501 + L2 LINE L2 3077 3262 -10 2333 107 7 0 chr2 15970373 15970683 -234717171 + AluSx SINE Alu 1 312 0 206 260 87 58 chr2 15970715 15970819 -234717035 + L2 LINE L2 3166 3272 0 342 134 0 97 chr2 15970826 15970896 -234716958 + AluS SINE Alu 2 57 -246 302 350 71 7 chr2 15971366 15971506 -234716348 - MIR SINE MIR -94 168 20 426 287 116 12 chr2 15972696 15972860 -234714994 - MIR SINE MIR -19 243 63 2298 74 0 23 chr2 15972868 15973201 -234714653 - AluSg SINE Alu 0 310 1 359 299 28 9 chr2 15973504 15973611 -234714243 + MIR3 SINE MIR 82 190 -18 2085 115 24 3 chr2 15975940 15976228 -234711626 - AluSq SINE Alu -17 296 3 187 31 62 0 chr2 15976435 15976467 -234711387 + T-rich Low_complexity Low_complexity 2 35 0 568 210 153 45 chr2 15976571 15976728 -234711126 + MER5A DNA MER1_type 16 189 0 269 290 84 30 chr2 15977314 15977445 -234710409 - MIR SINE MIR 0 262 125 183 167 24 24 chr2 15978383 15978425 -234709429 - L2 LINE L2 -5 3308 3267 945 230 140 4 chr2 15978646 15978911 -234708943 + MLT1D LTR MaLR 205 505 0 258 288 131 25 chr2 15979172 15979332 -234708522 - L2 LINE L2 -173 3099 2923 203 380 44 32 chr2 15979397 15979555 -234708299 - L2 LINE L2 -498 2816 2657 248 397 47 34 chr2 15979812 15980109 -234707745 + L3 LINE CR1 49 349 -1228 210 37 0 0 chr2 15980940 15980967 -234706887 + (CA)n Simple_repeat Simple_repeat 1 27 0 3111 199 98 32 chr2 15982035 15982177 -234705677 - MER21B LTR ERV1 -2 861 730 204 40 0 0 chr2 15982177 15982202 -234705652 + (CAATT)n Simple_repeat Simple_repeat 2 26 0 3111 199 98 32 chr2 15982202 15982784 -234705070 - MER21B LTR ERV1 -133 730 89 346 405 16 5 chr2 15984179 15984364 -234703490 + MIR SINE MIR 24 210 -52 198 271 106 24 chr2 15984334 15984419 -234703435 + L2 LINE L2 2766 2857 -457 * 194 98 78 20 chr2 15984624 15984726 -234703128 + (TA)n Simple_repeat Simple_repeat 2 109 0 477 34 0 0 chr2 15985107 15985166 -234702688 + (CA)n Simple_repeat Simple_repeat 2 60 0 3625 191 12 21 chr2 15986846 15987046 -234700808 - L1MC2 LINE L1 -2 7764 7564 2378 85 0 0 chr2 15987046 15987340 -234700514 - AluSg SINE Alu -16 294 1 3625 191 12 21 chr2 15987340 15987885 -234699969 - L1MC2 LINE L1 -202 7564 6137 241 325 78 95 chr2 15988104 15988516 -234699338 + L2 LINE L2 2825 3229 -43 539 241 69 0 chr2 15989425 15989541 -234698313 + L1ME4a LINE L1 5519 5642 -479 2681 212 100 111 chr2 15989560 15990597 -234697257 - L1MC5 LINE L1 -33 7928 6883 1962 163 165 11 chr2 15990597 15991033 -234696821 + MLT1D LTR MaLR 3 505 0 2681 212 100 111 chr2 15991033 15991462 -234696392 - L1MC5 LINE L1 -1078 6883 6451 285 98 0 0 chr2 15991468 15991509 -234696345 + (TA)n Simple_repeat Simple_repeat 1 41 0 260 184 0 0 chr2 15991583 15991661 -234696193 - Alu SINE Alu 0 323 246 796 304 73 72 chr2 15991685 15992383 -234695471 - L1M4 LINE L1 -1723 4423 3722 893 200 65 0 chr2 15992383 15992538 -234695316 - FAM SINE Alu -10 165 1 796 304 73 72 chr2 15992538 15992937 -234694917 - L1M4 LINE L1 -2424 3722 3325 284 289 167 4 chr2 15993083 15993322 -234694532 + L1ME4a LINE L1 5733 6010 -111 264 269 0 15 chr2 15993558 15993625 -234694229 + CT-rich Low_complexity Low_complexity 4 69 0 199 266 239 18 chr2 15993700 15993809 -234694045 - L2 LINE L2 -1 3312 3180 689 214 65 13 chr2 15993844 15993998 -234693856 + MER5A DNA MER1_type 2 163 -26 1488 228 21 9 chr2 15994015 15994340 -234693514 - MER58B DNA MER1_type -1 340 12 681 246 146 80 chr2 15994352 15994778 -234693076 - L3 LINE CR1 -174 1403 950 653 322 118 42 chr2 15994957 15996199 -234691655 + L2 LINE L2 1973 3313 0 228 305 195 0 chr2 15996225 15996307 -234691547 + L2 LINE L2 3159 3256 -16 249 274 14 0 chr2 15996324 15996397 -234691457 + (TGAA)n Simple_repeat Simple_repeat 3 76 0 185 252 46 130 chr2 15996928 15997059 -234690795 - L2 LINE L2 -13 3300 3181 186 133 0 0 chr2 15997953 15997983 -234689871 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 266 343 34 46 chr2 15998961 15999136 -234688718 - MIR SINE MIR -55 207 35 2290 99 0 13 chr2 15999387 15999700 -234688154 + AluY SINE Alu 1 309 -2 3897 189 21 4 chr2 15999795 16000511 -234687343 - L1MB2 LINE L1 -1 6170 5443 3169 244 75 45 chr2 16000873 16002039 -234685815 + L1ME1 LINE L1 3975 5228 -938 2099 132 3 28 chr2 16002039 16002357 -234685497 - AluSx SINE Alu -2 310 1 3169 244 75 45 chr2 16002357 16003320 -234684534 + L1ME1 LINE L1 5228 6161 -5 213 320 90 62 chr2 16003556 16003734 -234684120 + MIR3 SINE MIR 9 191 -17 22 0 0 0 chr2 16003762 16003784 -234684070 + AT_rich Low_complexity Low_complexity 1 22 0 1595 280 114 34 chr2 16004806 16005375 -234682479 - L2 LINE L2 -3 3310 2788 1162 234 167 34 chr2 16005375 16005819 -234682035 - MLT1D LTR MaLR -2 503 1 1595 280 114 34 chr2 16005819 16006401 -234681453 - L2 LINE L2 -525 2788 2057 847 197 80 5 chr2 16007643 16007831 -234680023 - MER20 DNA MER1_type -17 202 1 449 289 24 6 chr2 16007839 16008005 -234679849 + MER5A DNA MER1_type 1 169 -20 343 245 10 29 chr2 16008040 16008142 -234679712 + MER5B DNA MER1_type 18 117 -61 343 162 162 66 chr2 16009132 16009268 -234678586 + LTR50 LTR ERVL 1 149 -646 427 263 149 69 chr2 16009394 16009770 -234678084 + LTR33A LTR ERVL 292 523 0 257 354 71 9 chr2 16009785 16009997 -234677857 - L2 LINE L2 -222 3050 2826 250 330 10 0 chr2 16010161 16010258 -234677596 - L2 LINE L2 -572 2742 2645 200 274 110 0 chr2 16010328 16010401 -234677453 + MIR3 SINE MIR 78 158 -50 2134 97 10 35 chr2 16012083 16012374 -234675480 + AluSq SINE Alu 1 285 -28 180 97 0 0 chr2 16012374 16012405 -234675449 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 2134 97 10 35 chr2 16012405 16012423 -234675431 + AluSq SINE Alu 285 302 -11 300 221 44 15 chr2 16013351 16013419 -234674435 + MIR SINE MIR 84 153 -109 506 316 5 38 chr2 16013620 16013829 -234674025 - MIR SINE MIR -59 203 2 208 362 73 59 chr2 16014705 16014878 -234672976 + L2 LINE L2 2539 2708 -606 1485 173 64 0 chr2 16014878 16015157 -234672697 - AluJb SINE Alu 0 314 20 208 362 73 59 chr2 16015157 16015322 -234672532 + L2 LINE L2 2708 2883 -431 209 359 54 0 chr2 16015594 16015686 -234672168 + L2 LINE L2 3208 3304 -9 258 81 0 0 chr2 16015850 16015887 -234671967 + (TG)n Simple_repeat Simple_repeat 1 37 0 183 273 30 0 chr2 16017697 16017763 -234670091 - MIR3 SINE MIR -41 167 100 198 170 21 21 chr2 16019386 16019433 -234668421 + MIR SINE MIR 86 132 -130 207 0 0 0 chr2 16019487 16019510 -234668344 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2241 108 0 0 chr2 16019521 16019808 -234668046 - AluSx SINE Alu -25 287 1 283 256 85 0 chr2 16020185 16020335 -234667519 + MIR SINE MIR 30 194 -58 1394 107 56 5 chr2 16020475 16020691 -234667163 + MER30 DNA MER1_type 1 227 -3 334 299 8 0 chr2 16022511 16022628 -234665226 - MIR SINE MIR -58 150 33 265 266 6 6 chr2 16023974 16024151 -234663703 + (CATA)n Simple_repeat Simple_repeat 2 178 0 422 286 0 20 chr2 16024153 16024300 -234663554 + (CA)n Simple_repeat Simple_repeat 1 144 0 375 247 0 0 chr2 16024318 16024476 -234663378 + (CA)n Simple_repeat Simple_repeat 1 158 0 22 0 0 0 chr2 16025391 16025413 -234662441 + AT_rich Low_complexity Low_complexity 1 22 0 2481 44 40 0 chr2 16025753 16026051 -234661803 - AluY SINE Alu -1 310 1 814 288 107 36 chr2 16026491 16026904 -234660950 + LTR16A LTR ERVL 4 445 -5 215 59 0 29 chr2 16027338 16027372 -234660482 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 254 289 191 29 chr2 16028259 16028432 -234659422 - MIR3 SINE MIR -3 205 5 3496 126 55 17 chr2 16029072 16029651 -234658203 + MER7C DNA MER2_type 2 602 0 10525 186 39 4 chr2 16029682 16032284 -234655570 + L1MA4A LINE L1 923 3615 -3233 8983 128 6 0 chr2 16032290 16033565 -234654289 + HSMAR1 DNA Mariner 1 1282 -5 10777 172 46 9 chr2 16033570 16034433 -234653421 + L1MA4A LINE L1 3622 4452 -2553 213 39 0 0 chr2 16034433 16034459 -234653395 + (TA)n Simple_repeat Simple_repeat 2 27 0 10777 172 46 9 chr2 16034459 16036860 -234650994 + L1MA4A LINE L1 4452 6997 -8 22 35 0 0 chr2 16036861 16036890 -234650964 + AT_rich Low_complexity Low_complexity 1 29 0 2046 117 10 10 chr2 16036978 16037276 -234650578 + AluSc SINE Alu 3 300 -9 1639 256 157 39 chr2 16037476 16038239 -234649615 - HAL1 LINE L1 -1653 854 2 3210 185 24 26 chr2 16039621 16040041 -234647813 + L1MB3 LINE L1 5497 5917 -266 2139 141 0 0 chr2 16040041 16040345 -234647509 - AluSx SINE Alu -7 305 2 3210 185 24 26 chr2 16040345 16040579 -234647275 + L1MB3 LINE L1 5917 6150 -33 1408 164 13 4 chr2 16040579 16040838 -234647016 + AluJb SINE Alu 50 310 0 272 71 0 0 chr2 16040838 16040880 -234646974 + L1MB4 LINE L1 6139 6180 0 788 191 62 11 chr2 16041598 16041776 -234646078 - MER5A DNA MER1_type 0 189 3 1460 144 104 15 chr2 16042047 16042317 -234645537 + MSTA LTR MaLR 2 295 -133 9530 148 14 22 chr2 16042352 16042854 -234645000 + MSTA-int LTR MaLR 5 510 -1070 207 0 0 0 chr2 16042854 16042877 -234644977 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9530 148 14 22 chr2 16042877 16043957 -234643897 + MSTA-int LTR MaLR 510 1574 -6 1558 180 196 14 chr2 16043963 16044325 -234643529 + MSTA LTR MaLR 1 428 0 2517 87 0 0 chr2 16045000 16045309 -234642545 - AluY SINE Alu -2 309 1 495 311 39 14 chr2 16045540 16045828 -234642026 - L1ME3A LINE L1 -154 5967 5678 443 274 100 66 chr2 16045868 16046419 -234641435 - L1 LINE L1 -1273 4873 4343 2336 103 0 6 chr2 16046419 16046730 -234641124 - AluSq SINE Alu -3 310 2 443 274 100 66 chr2 16046730 16047070 -234640784 - L1 LINE L1 -1803 4343 3943 2261 114 0 0 chr2 16047070 16047376 -234640478 + AluSg SINE Alu 1 306 -4 443 274 100 66 chr2 16047376 16047404 -234640450 - L1 LINE L1 -2203 3943 3917 602 268 150 38 chr2 16047419 16048254 -234639600 - L1 LINE L1 -2479 3667 2740 1901 166 0 22 chr2 16048293 16048606 -234639248 - AluJo SINE Alu -2 310 5 369 298 70 0 chr2 16048915 16049073 -234638781 - L1 LINE L1 -3537 2609 2441 2167 113 0 0 chr2 16049304 16049611 -234638243 - AluSx SINE Alu 0 307 1 21 57 0 0 chr2 16049700 16049735 -234638119 + AT_rich Low_complexity Low_complexity 1 35 0 889 105 0 15 chr2 16049807 16049940 -234637914 + L1PB1 LINE L1 6020 6150 -1 273 86 52 0 chr2 16049947 16050005 -234637849 + (TA)n Simple_repeat Simple_repeat 2 62 0 394 318 78 31 chr2 16050211 16050425 -234637429 - HAL1 LINE L1 -833 1674 1471 2015 88 3 88 chr2 16050425 16050733 -234637121 + AluY SINE Alu 1 282 -29 331 70 0 0 chr2 16050690 16050733 -234637121 + Alu SINE Alu 239 335 0 454 19 0 0 chr2 16050733 16050787 -234637067 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 394 318 78 31 chr2 16050787 16050958 -234636896 - HAL1 LINE L1 -1035 1472 1270 186 43 0 0 chr2 16050992 16051015 -234636839 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2162 107 7 0 chr2 16051017 16051297 -234636557 - AluSp SINE Alu -31 282 1 339 343 28 28 chr2 16051946 16052089 -234635765 + MIR3 SINE MIR 44 186 -22 627 254 50 28 chr2 16053342 16053553 -234634301 - MER20B DNA MER1_type 0 219 1 272 275 61 84 chr2 16053825 16053956 -234633898 + L2 LINE L2 3145 3272 0 275 209 275 0 chr2 16054225 16054316 -234633538 - MER96 DNA MER1_type? -9 166 51 394 297 78 8 chr2 16054361 16054489 -234633365 - MIR SINE MIR -110 152 16 333 267 20 0 chr2 16054500 16054601 -234633253 + MER5C DNA MER1_type 26 128 -196 185 205 103 26 chr2 16054654 16054732 -234633122 + MER5C DNA MER1_type 241 324 0 22 56 0 0 chr2 16054850 16054886 -234632968 + AT_rich Low_complexity Low_complexity 1 36 0 262 191 118 88 chr2 16055108 16055244 -234632610 - L1ME LINE L1 -291 5879 5740 393 224 31 10 chr2 16055248 16055346 -234632508 + LTR41 LTR ERVL 2 101 -672 958 223 125 105 chr2 16055499 16055908 -234631946 + LTR41 LTR ERVL 351 767 -6 500 287 121 24 chr2 16055917 16056770 -234631084 - L1ME LINE L1 -425 5739 4802 617 297 94 5 chr2 16056856 16057068 -234630786 - MIR SINE MIR -31 231 1 522 304 130 4 chr2 16057364 16057587 -234630267 + MIR SINE MIR 2 249 -13 697 264 24 6 chr2 16058286 16058453 -234629401 - MIR SINE MIR -8 254 85 377 274 11 0 chr2 16060724 16060819 -234627035 + MER94 DNA DNA 39 134 0 26 88 0 0 chr2 16061119 16061187 -234626667 + AT_rich Low_complexity Low_complexity 1 68 0 383 293 0 32 chr2 16061341 16061485 -234626369 - L1M4 LINE L1 -1091 5055 4916 757 277 106 43 chr2 16061726 16062452 -234625402 - L1M4 LINE L1 -1404 4742 3971 1559 181 20 3 chr2 16062513 16062811 -234625043 - L1MA4 LINE L1 -20 6280 5978 230 204 20 0 chr2 16062954 16063003 -234624851 + (TATG)n Simple_repeat Simple_repeat 2 51 0 3891 226 167 37 chr2 16063117 16064477 -234623377 - L1MD3 LINE L1 0 7995 6459 1977 139 7 3 chr2 16064630 16064918 -234622936 - AluJb SINE Alu -23 289 1 418 294 14 28 chr2 16065546 16065689 -234622165 + CT-rich Low_complexity Low_complexity 4 144 0 492 297 73 10 chr2 16065692 16065884 -234621970 + MIR SINE MIR 47 250 -12 1825 193 20 50 chr2 16066718 16067118 -234620736 - MLT1B LTR MaLR 0 390 3 246 293 233 13 chr2 16068357 16068507 -234619347 + MIR SINE MIR 15 197 -65 334 282 9 18 chr2 16068513 16068623 -234619231 + MIR SINE MIR 56 164 -98 228 222 139 83 chr2 16068655 16068763 -234619091 + MIR SINE MIR 149 262 0 1249 196 80 3 chr2 16069134 16069260 -234618594 + MER33 DNA MER1_type 1 116 -2469 1826 171 13 3 chr2 16069260 16069564 -234618290 + AluJo SINE Alu 1 307 -5 1249 196 80 3 chr2 16069564 16069738 -234618116 + MER33 DNA MER1_type 116 324 0 286 270 44 80 chr2 16069986 16070123 -234617731 + L2 LINE L2 2919 3050 -222 2141 132 0 28 chr2 16070700 16071019 -234616835 - AluSx SINE Alu -2 310 1 302 324 48 28 chr2 16071504 16071649 -234616205 + HAL1 LINE L1 1287 1434 -1073 2296 105 0 0 chr2 16071736 16072030 -234615824 - AluSq SINE Alu -17 296 3 361 322 25 89 chr2 16072224 16072709 -234615145 + L1ME LINE L1 5316 5769 -352 32 67 0 0 chr2 16072711 16072771 -234615083 + AT_rich Low_complexity Low_complexity 1 60 0 1646 264 90 40 chr2 16073008 16073956 -234613898 - L2 LINE L2 0 3313 2305 2375 111 18 12 chr2 16074198 16074531 -234613323 - L1PA10 LINE L1 -4 6164 5830 509 257 78 5 chr2 16074531 16074749 -234613105 - L1M4 LINE L1 -2753 3393 3160 242 244 64 26 chr2 16074761 16074839 -234613015 + MIR SINE MIR 170 250 -12 271 197 14 56 chr2 16075322 16075393 -234612461 + MER91 DNA MER1_type 73 140 0 643 266 121 8 chr2 16075671 16076043 -234611811 + L1ME4a LINE L1 5705 6118 -3 227 353 134 10 chr2 16076647 16076848 -234611006 + MIR SINE MIR 14 239 -23 363 331 135 0 chr2 16077516 16077694 -234610160 - MIR SINE MIR -16 246 45 189 74 0 0 chr2 16078569 16078596 -234609258 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 215 263 58 73 chr2 16078598 16078735 -234609119 + MIR3 SINE MIR 10 144 -64 317 299 98 17 chr2 16079259 16079433 -234608421 - MER5A DNA MER1_type -1 188 1 187 238 225 0 chr2 16079461 16079541 -234608313 - MIR3 SINE MIR -8 200 103 1510 193 25 0 chr2 16079923 16080198 -234607656 + AluJo SINE Alu 11 292 -20 2174 107 10 3 chr2 16080200 16080498 -234607356 + AluSq SINE Alu 1 300 -13 228 348 115 20 chr2 16080686 16080991 -234606863 + L2 LINE L2 1615 1948 -1366 201 261 60 82 chr2 16080979 16081113 -234606741 + MIR SINE MIR 120 250 -12 * 363 169 0 0 chr2 16081600 16081671 -234606183 + (TG)n Simple_repeat Simple_repeat 1 71 0 275 258 75 21 chr2 16082066 16082159 -234605695 + MIR SINE MIR 50 147 -61 297 307 86 14 chr2 16082173 16082313 -234605541 - L2 LINE L2 -1 3271 3122 405 300 175 41 chr2 16082334 16082901 -234604953 - L2 LINE L2 -823 2491 1849 816 65 0 0 chr2 16083019 16083126 -234604728 + (TTCC)n Simple_repeat Simple_repeat 1 107 0 4606 88 0 5 chr2 16083126 16083725 -234604129 - L1PB1 LINE L1 -13 6138 5543 244 184 0 26 chr2 16087089 16087165 -234600689 + (CA)n Simple_repeat Simple_repeat 2 75 0 441 136 36 28 chr2 16087592 16087851 -234600003 + (CA)n Simple_repeat Simple_repeat 1 261 0 264 115 80 0 chr2 16087915 16088028 -234599826 + (CA)n Simple_repeat Simple_repeat 2 123 0 328 114 57 40 chr2 16088063 16088239 -234599615 + (CA)n Simple_repeat Simple_repeat 2 180 0 504 102 73 0 chr2 16088303 16088556 -234599298 + (CA)n Simple_repeat Simple_repeat 1 271 0 282 124 74 0 chr2 16088572 16088693 -234599161 + (CA)n Simple_repeat Simple_repeat 2 131 0 246 214 51 10 chr2 16088705 16088803 -234599051 + (CA)n Simple_repeat Simple_repeat 1 102 0 248 0 31 0 chr2 16088869 16088901 -234598953 + (CA)n Simple_repeat Simple_repeat 2 34 0 454 230 24 24 chr2 16089135 16089300 -234598554 + (CA)n Simple_repeat Simple_repeat 1 165 0 319 231 57 46 chr2 16089665 16089774 -234598080 + MIR SINE MIR 42 150 -62 22 0 0 0 chr2 16089851 16089873 -234597981 + AT_rich Low_complexity Low_complexity 1 22 0 212 245 0 0 chr2 16090013 16090062 -234597792 + T-rich Low_complexity Low_complexity 1 49 0 288 267 0 13 chr2 16090691 16090766 -234597088 + L2 LINE L2 3198 3271 -1 2272 113 3 0 chr2 16092711 16093020 -234594834 + AluSg SINE Alu 1 310 0 221 208 52 31 chr2 16093477 16093573 -234594281 - L3b LINE CR1 -207 1376 1279 339 217 22 28 chr2 16094027 16094207 -234593647 + (TA)n Simple_repeat Simple_repeat 2 180 0 333 274 219 0 chr2 16094262 16094426 -234593428 - MIR SINE MIR -56 206 7 1368 77 0 0 chr2 16094553 16094723 -234593131 + AluY SINE Alu 130 299 -12 301 226 147 10 chr2 16094853 16094955 -234592899 - L2 LINE L2 -2 3311 3196 379 229 42 2 chr2 16095595 16095710 -234592144 - MIR SINE MIR -62 146 37 237 286 0 0 chr2 16096104 16096167 -234591687 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 247 361 57 25 chr2 16096173 16096331 -234591523 - L2 LINE L2 0 3272 3110 204 313 109 47 chr2 16097142 16097531 -234590323 - L2 LINE L2 -238 3034 2606 266 301 124 9 chr2 16098588 16098701 -234589153 - MIR3 SINE MIR -41 167 42 2061 144 102 3 chr2 16098811 16099164 -234588690 - MLT1B LTR MaLR -2 388 1 300 287 70 38 chr2 16099298 16099455 -234588399 - MIR SINE MIR -49 213 52 203 147 29 0 chr2 16101121 16101155 -234586699 + L2 LINE L2 3255 3289 -24 352 268 130 7 chr2 16101307 16101445 -234586409 + MIR SINE MIR 104 258 -4 231 359 35 47 chr2 16103306 16103476 -234584378 - MIR SINE MIR -70 192 25 210 220 0 0 chr2 16103561 16103620 -234584234 + (CAT)n Simple_repeat Simple_repeat 1 59 0 867 183 0 0 chr2 16103669 16103849 -234584005 + (CAT)n Simple_repeat Simple_repeat 1 180 0 559 71 24 0 chr2 16104363 16104447 -234583407 - L1PB2 LINE L1 -3 6148 6063 857 244 62 0 chr2 16104601 16104810 -234583044 + MER58A DNA MER1_type 3 224 0 2853 253 107 75 chr2 16104816 16105474 -234582380 + L2 LINE L2 1486 2122 -1191 915 203 184 44 chr2 16105474 16105794 -234582060 - MLT1A1 LTR MaLR 0 365 1 2853 253 107 75 chr2 16105794 16106911 -234580943 + L2 LINE L2 2122 3313 0 302 352 49 6 chr2 16107426 16107588 -234580266 + MIR SINE MIR 23 191 -71 180 278 151 48 chr2 16108001 16108127 -234579727 - MIR3 SINE MIR -68 140 2 2367 85 7 3 chr2 16108186 16108493 -234579361 + AluSq SINE Alu 1 308 -5 820 174 29 17 chr2 16108538 16108710 -234579144 + MLT1A1 LTR MaLR 3 176 -189 2854 178 11 15 chr2 16108930 16109465 -234578389 - L1MA6 LINE L1 -6 6294 5762 387 225 83 138 chr2 16109470 16109638 -234578216 - L2 LINE L2 -7 3306 3163 1926 148 7 0 chr2 16109638 16109922 -234577932 + AluSx SINE Alu 1 286 -26 387 225 83 138 chr2 16109922 16110078 -234577776 - L2 LINE L2 -150 3163 3000 21 36 0 0 chr2 16110078 16110106 -234577748 + AT_rich Low_complexity Low_complexity 1 28 0 253 331 41 8 chr2 16110224 16110345 -234577509 - L3 LINE CR1 -142 1435 1311 806 262 99 60 chr2 16110345 16110727 -234577127 + MLT1J2 LTR MaLR 1 397 -53 223 241 17 17 chr2 16111043 16111101 -234576753 + L2 LINE L2 3215 3272 0 2586 44 0 19 chr2 16112921 16113238 -234574616 - AluY SINE Alu 0 311 1 185 116 43 101 chr2 16113291 16113360 -234574494 - L2 LINE L2 -95 3218 3154 432 323 80 67 chr2 16113708 16114338 -234573516 - L2 LINE L2 -39 3233 2542 480 321 96 65 chr2 16114338 16115102 -234572752 + L1M4 LINE L1 4134 4920 -1226 194 308 93 9 chr2 16116759 16116866 -234570988 - MIR SINE MIR -13 249 134 579 246 153 5 chr2 16117677 16117880 -234569974 - MLT1L LTR MaLR -339 276 44 256 324 0 0 chr2 16118168 16118239 -234569615 - MIR SINE MIR -132 130 60 1618 229 106 1 chr2 16118291 16118752 -234569102 - MLT1F1 LTR MaLR 0 542 1 273 341 64 70 chr2 16121902 16122260 -234565594 - L2 LINE L2 0 3272 2917 400 228 343 14 chr2 16122577 16122796 -234565058 - MER5C DNA MER1_type -2 322 32 256 335 130 31 chr2 16123488 16123716 -234564138 + L2 LINE L2 2077 2281 -1033 2327 195 71 25 chr2 16123716 16124197 -234563657 + MLT1D LTR MaLR 3 505 0 256 335 130 31 chr2 16124197 16124353 -234563501 + L2 LINE L2 2281 2499 -815 183 288 68 14 chr2 16124376 16124449 -234563405 + L2 LINE L2 2764 2840 -474 318 313 102 54 chr2 16124529 16124823 -234563031 + L2 LINE L2 2956 3263 -9 363 245 43 0 chr2 16125060 16125154 -234562700 - MIR SINE MIR 0 262 165 646 252 7 0 chr2 16125244 16125383 -234562471 - MIR SINE MIR -120 142 3 266 323 100 8 chr2 16125451 16125581 -234562273 - L2 LINE L2 0 3313 3172 252 366 29 23 chr2 16126251 16126423 -234561431 + MIR SINE MIR 47 219 -43 223 178 0 0 chr2 16126527 16126572 -234561282 - L2 LINE L2 0 3313 3269 225 269 32 65 chr2 16127122 16127215 -234560639 + MIR SINE MIR 118 207 -55 1548 187 92 38 chr2 16127245 16127614 -234560240 - MLT1B LTR MaLR -1 389 1 1286 265 98 70 chr2 16129304 16129604 -234558250 - HAL1 LINE L1 -21 2486 2196 834 244 60 5 chr2 16129604 16129805 -234558049 + MER58C DNA MER1_type 3 214 -1 1286 265 98 70 chr2 16129805 16130443 -234557411 - HAL1 LINE L1 -311 2196 1522 404 351 176 28 chr2 16130546 16130933 -234556921 - HAL1 LINE L1 -1757 750 307 195 266 153 95 chr2 16131249 16131490 -234556364 - L2 LINE L2 -4 3268 3014 469 299 48 39 chr2 16131735 16131966 -234555888 - MIR SINE MIR -25 237 5 268 310 136 11 chr2 16133065 16133249 -234554605 - MIR SINE MIR -16 246 40 207 0 0 0 chr2 16134010 16134033 -234553821 + (TA)n Simple_repeat Simple_repeat 1 23 0 2103 123 0 13 chr2 16134034 16134342 -234553512 + AluSx SINE Alu 1 304 -8 24 0 0 0 chr2 16134469 16134493 -234553361 + AT_rich Low_complexity Low_complexity 1 24 0 399 294 94 71 chr2 16135290 16135630 -234552224 + L2 LINE L2 2907 3254 -18 255 323 10 0 chr2 16135815 16135914 -234551940 - MER117 DNA MER1_type -96 101 2 323 265 7 143 chr2 16136739 16136886 -234550968 - MER91C DNA MER1_type -13 127 1 27 62 0 0 chr2 16137101 16137149 -234550705 + AT_rich Low_complexity Low_complexity 1 48 0 1179 242 5 96 chr2 16137234 16137631 -234550223 - MLT1A2 LTR MaLR -13 361 1 506 288 50 3 chr2 16137678 16137882 -234549972 + MLT1F1 LTR MaLR 7 285 -282 354 259 83 102 chr2 16138172 16138485 -234549369 + MLT1F-int LTR MaLR 1028 1334 -37 1842 248 100 22 chr2 16138500 16139000 -234548854 + MLT1F LTR MaLR 4 542 0 304 305 49 37 chr2 16139083 16139247 -234548607 + MIR3 SINE MIR 24 189 -19 454 234 27 98 chr2 16139524 16139661 -234548193 + MIR SINE MIR 42 164 -98 1725 155 67 67 chr2 16139661 16139993 -234547861 + THE1C LTR MaLR 1 335 -40 2236 125 3 0 chr2 16139993 16140297 -234547557 - AluSq SINE Alu -8 305 1 1725 155 67 67 chr2 16140297 16140339 -234547515 + THE1C LTR MaLR 334 375 0 454 234 27 98 chr2 16140339 16140385 -234547469 + MIR SINE MIR 164 212 -50 203 286 92 107 chr2 16140848 16141054 -234546800 + L2 LINE L2 2994 3196 -76 2847 10 0 0 chr2 16141088 16141395 -234546459 - AluYa5 SINE Alu -4 307 1 222 191 0 0 chr2 16141429 16141476 -234546378 + GA-rich Low_complexity Low_complexity 2 48 0 263 272 136 0 chr2 16141591 16141672 -234546182 - MIR SINE MIR -105 157 66 2950 41 0 9 chr2 16142194 16142536 -234545318 - L1PA5 LINE L1 -2 6152 5814 355 333 41 10 chr2 16142562 16142757 -234545097 + L2 LINE L2 2148 2348 -966 185 318 71 12 chr2 16142916 16143001 -234544853 - MIR SINE MIR -79 129 40 208 235 0 0 chr2 16143256 16143307 -234544547 + (CAA)n Simple_repeat Simple_repeat 1 51 0 243 0 0 0 chr2 16144047 16144074 -234543780 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 187 247 63 134 chr2 16144397 16144620 -234543234 + MIR SINE MIR 47 253 -9 278 264 103 70 chr2 16144756 16144929 -234542925 + MLT1J LTR MaLR 1 156 -294 556 145 0 103 chr2 16145050 16145159 -234542695 + MLT1J LTR MaLR 339 458 -53 2100 110 0 0 chr2 16145159 16145471 -234542383 + AluY SINE Alu 1 312 0 1998 134 20 0 chr2 16145474 16145772 -234542082 + AluSq SINE Alu 1 304 -9 556 145 0 103 chr2 16145772 16145802 -234542052 + MLT1J LTR MaLR 460 468 -43 338 308 51 8 chr2 16146365 16146482 -234541372 - L2 LINE L2 -1 3312 3191 189 273 68 0 chr2 16146546 16146590 -234541264 - L2 LINE L2 -75 3197 3151 233 366 99 30 chr2 16147765 16147896 -234539958 + L2 LINE L2 2600 2739 -575 293 338 51 13 chr2 16148558 16148715 -234539139 - MIR SINE MIR -65 197 35 240 269 30 30 chr2 16148715 16148782 -234539072 + L2 LINE L2 3232 3298 -15 472 287 100 32 chr2 16148884 16149382 -234538472 - L1ME4a LINE L1 -70 6051 5520 887 260 79 62 chr2 16149513 16149987 -234537867 - L1ME LINE L1 -549 5684 5192 2204 121 0 3 chr2 16149987 16150284 -234537570 + AluSc SINE Alu 1 296 -13 887 260 79 62 chr2 16150284 16150428 -234537426 - L1ME LINE L1 -1041 5192 5052 * 1166 270 31 47 chr2 16150426 16151097 -234536757 - L1MEc LINE L1 -3467 2748 2116 3089 260 56 55 chr2 16151135 16151260 -234536594 - L1MEc LINE L1 -4451 1945 1822 1672 174 24 17 chr2 16151260 16151553 -234536301 - AluJb SINE Alu -17 295 1 3089 260 56 55 chr2 16151553 16152353 -234535501 - L1MEc LINE L1 -4574 1822 1024 1822 134 76 10 chr2 16152353 16152644 -234535210 - AluSg SINE Alu 0 310 1 3089 260 56 55 chr2 16152644 16153605 -234534249 - L1MEc LINE L1 -5372 1024 37 242 271 0 0 chr2 16153606 16153665 -234534189 + MER5B DNA MER1_type 115 173 -5 323 303 86 45 chr2 16153679 16153904 -234533950 - L1ME4a LINE L1 -639 5482 5271 1683 172 72 19 chr2 16153906 16154226 -234533628 - MER44D DNA MER2_type 0 609 3 1888 156 175 80 chr2 16154693 16154775 -234533079 - MLT2B1 LTR ERVL 0 520 447 316 21 62 0 chr2 16154775 16154823 -234533031 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 1888 156 175 80 chr2 16154823 16155215 -234532639 - MLT2B1 LTR ERVL -73 447 1 497 243 41 93 chr2 16155611 16155879 -234531975 - L1MCb LINE L1 -5471 574 321 373 328 8 15 chr2 16157551 16157682 -234530172 + MIR SINE MIR 17 146 -62 201 247 43 0 chr2 16159079 16159146 -234528708 - MIR SINE MIR -80 182 113 207 373 0 13 chr2 16159260 16159335 -234528519 + MIR3 SINE MIR 15 88 -120 406 338 63 34 chr2 16159400 16159669 -234528185 + L2 LINE L2 2608 2884 -430 206 329 0 55 chr2 16159995 16160068 -234527786 + L2 LINE L2 3245 3313 0 395 237 44 0 chr2 16161035 16161149 -234526705 + MIR SINE MIR 61 179 -83 377 276 41 0 chr2 16161347 16161445 -234526409 - MER94 DNA DNA -32 102 1 215 248 214 17 chr2 16162229 16162346 -234525508 + MIR3 SINE MIR 62 201 -7 264 240 177 0 chr2 16162514 16162610 -234525244 + L2 LINE L2 3201 3313 0 402 206 14 0 chr2 16162835 16162908 -234524946 + MER2 DNA MER2_type 1 74 -271 5297 140 18 13 chr2 16163732 16164568 -234523286 + L1MC1 LINE L1 5494 6333 0 248 296 169 12 chr2 16165865 16166037 -234521817 - MIR SINE MIR -4 258 60 2358 181 91 44 chr2 16166120 16166555 -234521299 + MLT2B1 LTR ERVL 1 463 -57 279 114 0 0 chr2 16166555 16166599 -234521255 + (TG)n Simple_repeat Simple_repeat 1 44 0 2358 181 91 44 chr2 16166599 16166660 -234521194 + MLT2B1 LTR ERVL 463 520 0 2304 107 7 0 chr2 16166927 16167236 -234520618 + AluSx SINE Alu 1 311 -1 213 355 71 12 chr2 16167689 16167858 -234519996 - MIR SINE MIR 0 262 84 209 303 56 63 chr2 16168591 16168733 -234519121 + MIR SINE MIR 52 192 -70 1909 204 52 12 chr2 16169200 16169601 -234518253 - MSTB LTR MaLR -2 424 8 2117 258 65 21 chr2 16170466 16171141 -234516713 - MER20B DNA MER1_type -14 769 65 370 254 29 43 chr2 16173203 16173341 -234514513 - L1ME LINE L1 -393 5728 5593 308 334 116 36 chr2 16174743 16175083 -234512771 + L2 LINE L2 2624 2997 -275 2008 135 28 0 chr2 16175521 16175810 -234512044 - AluSx SINE Alu -15 297 1 184 261 22 0 chr2 16177372 16177418 -234510436 + L2 LINE L2 3267 3313 0 202 352 0 11 chr2 16177665 16177753 -234510101 + L3 LINE CR1 1289 1375 -202 1932 271 110 27 chr2 16177787 16178495 -234509359 + LTR41 LTR ERVL 1 767 -6 27 29 0 0 chr2 16178828 16178862 -234508992 + AT_rich Low_complexity Low_complexity 1 34 0 493 273 182 16 chr2 16178873 16179060 -234508794 - MIR SINE MIR -16 246 29 268 357 77 58 chr2 16179788 16180113 -234507741 + L2 LINE L2 2942 3272 0 343 368 7 0 chr2 16180148 16180284 -234507570 + MIR3 SINE MIR 72 208 0 2076 150 16 0 chr2 16180901 16181273 -234506581 - AluSx SINE Alu 0 377 1 326 227 30 0 chr2 16181656 16181722 -234506132 - MIR SINE MIR -68 140 73 21 0 0 0 chr2 16182191 16182212 -234505642 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr2 16182962 16183002 -234504852 + AT_rich Low_complexity Low_complexity 1 40 0 315 274 55 62 chr2 16183083 16183229 -234504625 - HAL1 LINE L1 -740 1767 1623 610 249 67 79 chr2 16183245 16183324 -234504530 - HAL1 LINE L1 -976 1531 1453 195 42 0 0 chr2 16183324 16183348 -234504506 + (TC)n Simple_repeat Simple_repeat 1 24 0 610 249 67 79 chr2 16183348 16183482 -234504372 - HAL1 LINE L1 -1054 1453 1319 2034 73 0 22 chr2 16183482 16183754 -234504100 + AluY SINE Alu 1 266 -45 610 249 67 79 chr2 16183754 16184046 -234503808 - HAL1 LINE L1 -1188 1319 1031 22 70 0 0 chr2 16184063 16184106 -234503748 + AT_rich Low_complexity Low_complexity 1 43 0 1292 199 81 75 chr2 16185048 16185420 -234502434 - MLT1A2 LTR MaLR 0 374 1 6830 87 19 0 chr2 16185471 16186595 -234501259 + L1PA14 LINE L1 5023 6159 -2 22 0 0 0 chr2 16186705 16186727 -234501127 + AT_rich Low_complexity Low_complexity 1 22 0 267 300 153 40 chr2 16187772 16187922 -234499932 - MIR3 SINE MIR -23 185 19 1204 256 52 59 chr2 16187953 16188411 -234499443 + L2 LINE L2 2804 3258 -55 281 317 48 75 chr2 16189259 16189445 -234498409 + MIR3 SINE MIR 25 205 -3 183 355 32 0 chr2 16189793 16189886 -234497968 + L2 LINE L2 2942 3037 -235 330 265 151 52 chr2 16191197 16191333 -234496521 - MIR3 SINE MIR -53 155 4 327 298 115 25 chr2 16191413 16191648 -234496206 - LTR33 LTR ERVL -67 454 199 470 233 17 0 chr2 16191681 16191801 -234496053 - LTR33 LTR ERVL -387 134 13 5039 94 5 6 chr2 16192059 16192727 -234495127 - L1PA13 LINE L1 -2 6161 5495 890 276 124 49 chr2 16193836 16194597 -234493257 + L2 LINE L2 2448 3313 0 198 246 70 18 chr2 16194788 16194845 -234493009 + MIR SINE MIR 107 166 -96 247 270 0 0 chr2 16195236 16195299 -234492555 + MIR SINE MIR 161 223 -39 414 335 62 22 chr2 16195861 16196085 -234491769 - MIR SINE MIR -10 252 20 227 308 62 0 chr2 16196331 16196396 -234491458 + MIR3 SINE MIR 116 184 -24 1728 176 43 54 chr2 16196745 16197114 -234490740 - MLT1A1 LTR MaLR 0 365 1 2744 208 75 61 chr2 16197575 16198492 -234489362 - MER63C DNA MER1_type 0 930 1 328 303 55 35 chr2 16199133 16199278 -234488576 - MIR SINE MIR -16 246 99 1917 139 17 7 chr2 16199278 16199579 -234488275 - AluSx SINE Alu -8 304 1 197 154 0 90 chr2 16249983 16250054 -234437800 + MIR SINE MIR 96 142 -66 226 358 28 45 chr2 16250660 16250805 -234437049 + MIR SINE MIR 7 150 -112 1214 277 107 2 chr2 16250805 16251198 -234436656 - MER57B LTR ERV1 0 434 1 226 358 28 45 chr2 16251198 16251228 -234436626 + MIR SINE MIR 150 179 -83 1635 142 52 10 chr2 16251541 16251830 -234436024 - AluSx SINE Alu -11 301 1 186 43 0 0 chr2 16251960 16251983 -234435871 + (CAAT)n Simple_repeat Simple_repeat 3 25 0 21 36 0 0 chr2 16252547 16252575 -234435279 + GC_rich Low_complexity Low_complexity 1 28 0 3421 96 19 74 chr2 16252625 16254286 -234433568 + SVA Other Other 393 1077 -309 236 68 0 45 chr2 16254799 16254843 -234433011 + (CAAAAA)n Simple_repeat Simple_repeat 4 45 0 185 196 78 0 chr2 16255517 16255568 -234432286 - L3 LINE CR1 -1239 338 284 3260 85 16 5 chr2 16255595 16256032 -234431822 - MLT2A1 LTR ERVL 0 444 3 1276 220 10 0 chr2 16256034 16256330 -234431524 - HERVL-A1 LTR ERVL 0 5654 5356 678 311 135 50 chr2 16256528 16257241 -234430613 - L1 LINE L1 -2368 3778 3006 499 266 40 28 chr2 16257614 16257791 -234430063 + MLT1A2 LTR MaLR 1 179 -195 21 0 0 0 chr2 16257882 16257903 -234429951 + GC_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 16257956 16257981 -234429873 + GC_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 16258033 16258054 -234429800 + GC_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 16258082 16258105 -234429749 + GC_rich Low_complexity Low_complexity 1 23 0 296 29 0 0 chr2 16258217 16258251 -234429603 + (G)n Simple_repeat Simple_repeat 1 34 0 412 197 0 22 chr2 16258546 16258683 -234429171 + CT-rich Low_complexity Low_complexity 1 134 0 1626 158 217 17 chr2 16259611 16260016 -234427838 - MER51A LTR ERV1 -148 486 1 210 118 0 0 chr2 16260402 16260436 -234427418 + (TG)n Simple_repeat Simple_repeat 1 34 0 1895 119 58 7 chr2 16261047 16261324 -234426530 - AluSx SINE Alu -20 292 2 622 286 112 24 chr2 16261327 16261847 -234426007 - L2 LINE L2 -161 3152 2596 219 344 31 47 chr2 16263580 16263708 -234424146 + MIR3 SINE MIR 44 169 -39 2069 125 3 26 chr2 16265594 16265897 -234421957 - AluSx SINE Alu -16 296 1 354 333 36 18 chr2 16266567 16266735 -234421119 + MIR SINE MIR 79 249 -13 204 352 0 28 chr2 16267383 16267454 -234420400 + MIR SINE MIR 60 128 -80 305 241 0 0 chr2 16267467 16267525 -234420329 + L2 LINE L2 2917 2974 -340 296 282 51 0 chr2 16267662 16267740 -234420114 + L2 LINE L2 3230 3311 -2 * 446 368 90 16 chr2 16267731 16268052 -234419802 - L3 LINE CR1 -317 1260 916 447 317 68 16 chr2 16268094 16268343 -234419511 - MIR SINE MIR 0 262 1 182 276 41 92 chr2 16268541 16268639 -234419215 - MIR3 SINE MIR -5 203 111 360 0 0 0 chr2 16268898 16268938 -234418916 + (TA)n Simple_repeat Simple_repeat 2 41 0 192 286 157 14 chr2 16268988 16269058 -234418796 + L2 LINE L2 3155 3234 -38 2217 102 0 23 chr2 16269078 16269382 -234418472 + AluSc SINE Alu 1 297 -12 222 198 49 0 chr2 16270332 16270413 -234417441 + GA-rich Low_complexity Low_complexity 4 88 0 2513 126 3 3 chr2 16270789 16271153 -234416701 + THE1B LTR MaLR 1 364 0 250 304 59 39 chr2 16271444 16271546 -234416308 - MIR SINE MIR -2 260 157 409 203 326 14 chr2 16273118 16273256 -234414598 + MER5A DNA MER1_type 9 189 0 198 333 0 0 chr2 16273460 16273517 -234414337 - MIR SINE MIR -17 245 189 211 239 55 92 chr2 16273575 16273684 -234414170 + MIR3 SINE MIR 104 208 0 645 306 6 0 chr2 16274736 16274919 -234412935 - MIR SINE MIR 0 262 79 259 248 248 8 chr2 16275832 16275957 -234411897 - MIR3 SINE MIR -21 187 33 232 364 0 0 chr2 16276718 16276784 -234411070 + L3 LINE CR1 1399 1464 -113 284 291 136 0 chr2 16276971 16277081 -234410773 + MIR3 SINE MIR 14 138 -70 317 225 11 0 chr2 16277265 16277354 -234410500 + (CATA)n Simple_repeat Simple_repeat 3 92 0 240 157 0 20 chr2 16277360 16277411 -234410443 + LTR66 LTR ERVL 390 439 -171 451 302 68 64 chr2 16277872 16278167 -234409687 + L2 LINE L2 2974 3269 -3 379 289 82 86 chr2 16278866 16279181 -234408673 + L2 LINE L2 2957 3270 -2 738 297 103 62 chr2 16279563 16280031 -234407823 + L2 LINE L2 2827 3313 0 402 325 30 54 chr2 16280575 16280778 -234407076 - MIR SINE MIR -60 202 5 457 278 69 35 chr2 16282105 16282278 -234405576 - MIR3 SINE MIR 0 208 30 186 43 0 0 chr2 16282606 16282629 -234405225 + (TC)n Simple_repeat Simple_repeat 2 24 0 281 309 118 18 chr2 16284967 16285077 -234402777 - MIR SINE MIR -57 151 31 941 277 22 0 chr2 16285413 16285644 -234402210 - MIR SINE MIR 0 262 27 297 314 151 5 chr2 16286170 16286355 -234401499 - MIR SINE MIR 0 262 51 632 250 0 0 chr2 16286573 16286705 -234401149 + MER94 DNA DNA 1 132 -2 454 314 54 54 chr2 16288063 16288321 -234399533 - MIR SINE MIR -1 261 4 251 250 29 128 chr2 16289014 16289186 -234398668 + MIR SINE MIR 46 201 -61 215 298 183 29 chr2 16289595 16289699 -234398155 + MIR SINE MIR 113 232 -30 206 196 18 54 chr2 16290105 16290161 -234397693 + MIR3 SINE MIR 11 64 -144 301 283 9 38 chr2 16290380 16290486 -234397368 + MIR SINE MIR 33 136 -72 1101 148 188 64 chr2 16291407 16291680 -234396174 - AluSg SINE Alu 0 305 2 349 344 101 16 chr2 16291685 16291874 -234395980 + L2 LINE L2 2594 2798 -516 187 409 32 0 chr2 16291910 16292003 -234395851 - MIR3 SINE MIR -102 106 11 275 265 48 0 chr2 16292192 16292275 -234395579 - MIR SINE MIR -71 191 105 197 311 19 19 chr2 16292298 16292401 -234395453 + L2 LINE L2 2248 2350 -964 819 228 10 35 chr2 16292748 16292950 -234394904 - MER63A DNA MER1_type -13 197 1 387 245 113 6 chr2 16292966 16293093 -234394761 + MIR SINE MIR 24 160 -68 707 186 96 51 chr2 16293112 16293289 -234394565 + MER20 DNA MER1_type 35 219 0 231 343 15 0 chr2 16293445 16293512 -234394342 + L2 LINE L2 3204 3271 -1 245 391 22 17 chr2 16294434 16294613 -234393241 - MIR3 SINE MIR -16 192 13 1191 170 0 5 chr2 16294812 16295000 -234392854 + AluJb SINE Alu 120 306 -6 1645 201 19 35 chr2 16295249 16295618 -234392236 + MLT1A1 LTR MaLR 3 365 0 371 272 69 9 chr2 16295787 16295922 -234391932 - MIR3 SINE MIR -38 170 15 184 279 40 100 chr2 16296320 16296621 -234391233 - L2 LINE L2 -146 3126 2844 246 244 79 71 chr2 16296825 16296952 -234390902 + MIR SINE MIR 70 197 -65 23 33 0 0 chr2 16297961 16297991 -234389863 + AT_rich Low_complexity Low_complexity 1 30 0 2476 276 138 12 chr2 16299831 16300954 -234386900 + L2 LINE L2 1901 3153 -160 310 266 130 34 chr2 16300963 16301170 -234386684 - L1MCa LINE L1 -4305 2121 1895 348 216 0 54 chr2 16301176 16301250 -234386604 + L2 LINE L2 3244 3313 0 254 235 118 15 chr2 16301896 16301964 -234385890 + L2 LINE L2 3193 3267 -5 301 383 52 7 chr2 16302082 16302236 -234385618 + MIR SINE MIR 90 250 -12 313 357 48 18 chr2 16303347 16303515 -234384339 + MIR SINE MIR 90 262 0 227 288 0 30 chr2 16304103 16304169 -234383685 + MIR3 SINE MIR 104 167 -41 2207 196 58 58 chr2 16304615 16305135 -234382719 + MLT2B1 LTR ERVL 1 520 0 496 35 0 0 chr2 16305135 16305192 -234382662 - ERVL LTR ERVL -3207 2557 2501 351 322 21 70 chr2 16305573 16305846 -234382008 + L2 LINE L2 2795 3064 -249 703 207 7 8 chr2 16305998 16306151 -234381703 - MIR SINE MIR -49 213 63 229 316 34 60 chr2 16306728 16306845 -234381009 - L2 LINE L2 -11 3302 3189 1102 209 88 4 chr2 16307002 16307275 -234380579 - MER2 DNA MER2_type -1 344 49 349 296 0 18 chr2 16307594 16307763 -234380091 + (CAGTA)n Simple_repeat Simple_repeat 3 168 0 385 278 73 69 chr2 16307896 16308184 -234379670 + MLT1I LTR MaLR 98 386 -23 250 335 63 31 chr2 16311034 16311225 -234376629 - L2 LINE L2 -24 3248 3052 * 1437 229 64 60 chr2 16311210 16311709 -234376145 + L2 LINE L2 2813 3313 0 23 33 0 0 chr2 16312485 16312515 -234375339 + AT_rich Low_complexity Low_complexity 1 30 0 191 324 77 77 chr2 16312563 16312785 -234375069 + MIR SINE MIR 32 253 -9 436 282 58 6 chr2 16313310 16313466 -234374388 - MIR3 SINE MIR -29 179 16 283 245 6 6 chr2 16314165 16314324 -234373530 + (CA)n Simple_repeat Simple_repeat 2 160 0 208 173 0 19 chr2 16315459 16315511 -234372343 + T-rich Low_complexity Low_complexity 2 52 0 519 218 57 0 chr2 16315687 16315811 -234372043 - MER46C DNA MER2_type -1 337 207 357 193 136 11 chr2 16315875 16315963 -234371891 - MER46C DNA MER2_type -233 105 7 279 252 179 53 chr2 16316399 16316550 -234371304 - MIR SINE MIR -61 201 32 348 167 20 39 chr2 16316654 16316756 -234371098 + T-rich Low_complexity Low_complexity 1 100 0 423 303 1 16 chr2 16317250 16317399 -234370455 + MIR SINE MIR 6 151 -62 286 267 44 22 chr2 16318172 16318262 -234369592 - MIR3 SINE MIR -6 202 111 322 222 171 34 chr2 16318524 16318641 -234369213 + L2 LINE L2 3138 3270 -2 1737 148 30 0 chr2 16319027 16319297 -234368557 + AluJb SINE Alu 27 304 -8 448 275 77 2 chr2 16319764 16319918 -234367936 + MIR SINE MIR 28 187 -62 381 352 105 18 chr2 16320326 16320545 -234367309 - MIR SINE MIR -24 238 1 255 356 67 48 chr2 16320801 16321009 -234366845 + L2 LINE L2 3061 3272 0 259 235 63 0 chr2 16321255 16321329 -234366525 - MIR SINE MIR -56 152 86 429 279 57 0 chr2 16321982 16322104 -234365750 + MIR SINE MIR 84 212 -50 314 182 0 81 chr2 16323675 16323853 -234364001 + (CCCCG)n Simple_repeat Simple_repeat 1 163 0 318 67 0 0 chr2 16323870 16323915 -234363939 + (CCCCG)n Simple_repeat Simple_repeat 5 49 0 25 51 0 0 chr2 16323917 16323956 -234363898 + GC_rich Low_complexity Low_complexity 1 39 0 2248 107 0 3 chr2 16325077 16325376 -234362478 - AluSg SINE Alu -9 301 4 411 21 0 0 chr2 16325450 16325498 -234362356 + (CA)n Simple_repeat Simple_repeat 2 49 0 276 331 183 0 chr2 16327005 16327147 -234360707 + MIR SINE MIR 19 186 -76 183 42 0 0 chr2 16327192 16327216 -234360638 + (TG)n Simple_repeat Simple_repeat 1 24 0 268 378 21 34 chr2 16327714 16327947 -234359907 + L2 LINE L2 2864 3093 -179 3211 198 30 24 chr2 16328013 16328363 -234359491 + MER82 DNA MER2_type 1 358 -295 2154 107 0 7 chr2 16328363 16328653 -234359201 - AluSc SINE Alu -21 288 1 3211 198 30 24 chr2 16328653 16328929 -234358925 + MER82 DNA MER2_type 358 631 -22 318 347 7 67 chr2 16328944 16329094 -234358760 + L2 LINE L2 3132 3272 0 265 341 15 44 chr2 16329545 16329680 -234358174 + MIR SINE MIR 46 176 -86 229 204 0 0 chr2 16329678 16329722 -234358132 - L2 LINE L2 -5 3308 3265 * 2858 132 9 21 chr2 16329793 16330225 -234357629 - MSTA LTR MaLR -1 427 1 213 264 110 33 chr2 16330661 16330752 -234357102 - MIR SINE MIR -79 129 32 23 33 0 0 chr2 16331101 16331131 -234356723 + AT_rich Low_complexity Low_complexity 1 30 0 396 344 152 23 chr2 16331257 16331652 -234356202 + L2 LINE L2 2522 2967 -347 636 221 27 17 chr2 16332600 16332772 -234355082 - MIR3 SINE MIR -11 197 23 283 329 53 48 chr2 16333026 16333233 -234354621 + MIR SINE MIR 12 219 -43 221 56 0 28 chr2 16333352 16333388 -234354466 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 307 206 118 14 chr2 16333904 16334053 -234353801 + MLT1J2 LTR MaLR 25 182 -227 403 279 78 60 chr2 16334380 16335080 -234352774 - L1ME LINE L1 -552 5601 4889 285 86 0 0 chr2 16335224 16335259 -234352595 - U2 snRNA snRNA -153 35 1 186 219 21 10 chr2 16335324 16335420 -234352434 + (TA)n Simple_repeat Simple_repeat 2 98 0 738 302 61 44 chr2 16335523 16335817 -234352037 - L1ME LINE L1 -1618 4511 4223 958 287 5 0 chr2 16335817 16336040 -234351814 + MER58A DNA MER1_type 1 224 0 738 302 61 44 chr2 16336040 16336467 -234351387 - L1ME LINE L1 -1906 4223 3778 343 323 115 79 chr2 16336522 16336867 -234350987 - L1ME LINE L1 -5357 762 431 1907 144 13 17 chr2 16336867 16337166 -234350688 - AluSx SINE Alu -14 298 1 343 323 115 79 chr2 16337166 16337517 -234350337 - L1ME LINE L1 -5688 431 41 371 245 38 9 chr2 16338870 16338976 -234348878 + MIR SINE MIR 25 133 -75 201 303 13 0 chr2 16339361 16339437 -234348417 + L3 LINE CR1 1301 1377 -200 6650 37 0 3 chr2 16339544 16340294 -234347560 - L1PA4 LINE L1 0 6155 5408 263 85 21 0 chr2 16342621 16342668 -234345186 + (CA)n Simple_repeat Simple_repeat 1 48 0 982 177 0 0 chr2 16342792 16342950 -234344904 + AluJb SINE Alu 133 290 -22 862 106 7 7 chr2 16343650 16343792 -234344062 + (TTTC)n Simple_repeat Simple_repeat 4 145 0 222 91 0 0 chr2 16345685 16345718 -234342136 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 199 308 13 51 chr2 16345830 16345908 -234341946 + L3 LINE CR1 1392 1466 -111 303 267 174 31 chr2 16346120 16346281 -234341573 - MER20 DNA MER1_type -1 218 35 223 318 91 31 chr2 16346634 16346764 -234341090 + MIR SINE MIR 34 171 -68 2334 92 0 0 chr2 16346831 16347125 -234340729 + AluY SINE Alu 1 294 -17 1960 225 86 45 chr2 16347294 16347890 -234339964 - MLT1E2 LTR MaLR -6 620 1 271 336 38 38 chr2 16348115 16348353 -234339501 + HAL1 LINE L1 1423 1660 -847 22 56 0 0 chr2 16348544 16348580 -234339274 + AT_rich Low_complexity Low_complexity 1 36 0 348 303 38 57 chr2 16349095 16349306 -234338548 + L1M4 LINE L1 2328 2534 -3612 302 51 0 0 chr2 16349910 16349949 -234337905 + L1ME3A LINE L1 6124 6162 -8 22 0 0 0 chr2 16350370 16350392 -234337462 + AT_rich Low_complexity Low_complexity 1 22 0 305 47 23 0 chr2 16350702 16350745 -234337109 + (CA)n Simple_repeat Simple_repeat 1 44 0 302 294 130 23 chr2 16351341 16351603 -234336251 + L1M4 LINE L1 4400 4689 -1457 351 289 123 22 chr2 16352621 16352898 -234334956 - L1M4 LINE L1 -2634 3512 3208 22 0 0 0 chr2 16352908 16352930 -234334924 + AT_rich Low_complexity Low_complexity 1 22 0 7003 164 16 24 chr2 16352946 16354003 -234333851 - L1PB3 LINE L1 0 6154 5090 2792 102 3 0 chr2 16354003 16354357 -234333497 + THE1A LTR MaLR 1 355 0 7003 164 16 24 chr2 16354357 16354733 -234333121 - L1PB3 LINE L1 -1064 5090 4712 2433 138 25 3 chr2 16354733 16355089 -234332765 + THE1B LTR MaLR 1 364 0 7003 164 16 24 chr2 16355089 16356096 -234331758 - L1PB3 LINE L1 -1442 4712 3750 23 0 0 0 chr2 16356176 16356199 -234331655 + AT_rich Low_complexity Low_complexity 1 23 0 3252 117 10 10 chr2 16356245 16356748 -234331106 + L1PB3 LINE L1 5278 5780 -371 396 0 0 0 chr2 16356748 16356792 -234331062 + (TA)n Simple_repeat Simple_repeat 2 45 0 2435 147 3 13 chr2 16356841 16357216 -234330638 + L1PB3 LINE L1 5782 6152 -2 2220 90 10 7 chr2 16357562 16357861 -234329993 - AluSg SINE Alu -10 300 1 202 351 0 13 chr2 16358271 16358348 -234329506 - L2 LINE L2 -1 3312 3237 185 322 123 72 chr2 16358483 16358620 -234329234 - L2 LINE L2 -443 2871 2742 1371 255 30 14 chr2 16358620 16358988 -234328866 - MLT1A2 LTR MaLR 0 374 1 185 322 123 72 chr2 16358988 16359282 -234328572 - L2 LINE L2 -572 2742 2418 338 279 92 71 chr2 16359359 16359793 -234328061 + L1M4 LINE L1 3044 3486 -2660 1883 278 42 47 chr2 16360744 16361883 -234325971 - L1M4 LINE L1 -1094 5052 3920 290 304 0 0 chr2 16363959 16364038 -234323816 - MIR3 SINE MIR -25 183 105 1340 198 232 11 chr2 16364295 16364644 -234323210 - MSTB LTR MaLR 0 426 1 1957 219 58 30 chr2 16365033 16365553 -234322301 - MER74A LTR ERVL -22 600 2 193 286 65 0 chr2 16366024 16366101 -234321753 + MIR SINE MIR 109 190 -72 2040 151 0 0 chr2 16366839 16367151 -234320703 - AluSx SINE Alu 0 312 1 23 0 0 0 chr2 16367363 16367386 -234320468 + AT_rich Low_complexity Low_complexity 1 23 0 2227 143 13 41 chr2 16367407 16367800 -234320054 - MLT1B LTR MaLR -8 382 1 225 243 68 14 chr2 16367807 16367881 -234319973 - MLT1H LTR MaLR -6 543 466 611 232 80 71 chr2 16367988 16368390 -234319464 + MLT1G1 LTR MaLR 107 528 -2 1302 311 140 27 chr2 16368400 16369351 -234318503 - L2 LINE L2 -287 3026 1974 521 255 122 32 chr2 16369502 16369690 -234318164 + MIR SINE MIR 45 249 -13 814 296 12 28 chr2 16369981 16370234 -234317620 + MIR SINE MIR 14 262 0 335 313 35 21 chr2 16370221 16370365 -234317489 + L3 LINE CR1 1431 1576 -1 * 317 295 45 0 chr2 16370686 16370798 -234317056 + MIR SINE MIR 98 214 -48 653 178 6 64 chr2 16371729 16371886 -234315968 - L1MA7 LINE L1 -23 6268 6121 285 281 11 0 chr2 16372412 16372501 -234315353 + (TG)n Simple_repeat Simple_repeat 1 90 0 1112 212 91 74 chr2 16373848 16374268 -234313586 - LTR16A LTR ERVL -7 443 17 205 195 13 13 chr2 16374462 16374539 -234313315 + (TG)n Simple_repeat Simple_repeat 1 77 0 232 313 0 15 chr2 16375832 16375899 -234311955 - L2 LINE L2 -215 3057 2992 197 231 215 25 chr2 16376373 16376494 -234311360 + MIR3 SINE MIR 60 203 -5 216 0 0 0 chr2 16376502 16376526 -234311328 + (A)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr2 16376845 16376868 -234310986 + AT_rich Low_complexity Low_complexity 1 23 0 355 269 58 42 chr2 16377382 16377511 -234310343 + MIR SINE MIR 37 166 -62 5495 143 30 1 chr2 16377760 16378647 -234309207 - L1PA16 LINE L1 0 6166 5254 2087 129 190 11 chr2 16378709 16379072 -234308782 - MSTA LTR MaLR 0 428 1 299 189 306 9 chr2 16379652 16379763 -234308091 - MIR SINE MIR -66 196 53 2370 102 0 0 chr2 16379775 16380080 -234307774 + AluSc SINE Alu 1 305 -4 226 325 25 0 chr2 16380544 16380624 -234307230 + L2 LINE L2 2716 2797 -517 327 386 25 0 chr2 16380698 16380861 -234306993 - LTR16C LTR ERVL -254 237 71 22 35 0 0 chr2 16381720 16381749 -234306105 + AT_rich Low_complexity Low_complexity 1 29 0 252 86 0 0 chr2 16382706 16382741 -234305113 + (TG)n Simple_repeat Simple_repeat 2 36 0 489 321 82 52 chr2 16383466 16383796 -234304058 + L2 LINE L2 2932 3271 -1 288 331 51 22 chr2 16383952 16384095 -234303759 - MIR SINE MIR -63 145 9 258 176 0 0 chr2 16384499 16384550 -234303304 + CT-rich Low_complexity Low_complexity 2 52 0 235 321 25 12 chr2 16384710 16384791 -234303063 + MIR SINE MIR 33 114 -94 283 366 36 0 chr2 16384821 16384933 -234302921 + L2 LINE L2 3121 3236 -36 2089 135 76 22 chr2 16385942 16386298 -234301556 + THE1C LTR MaLR 1 375 0 714 274 70 57 chr2 16388735 16389136 -234298718 - L1ME3 LINE L1 -213 5949 5544 2100 139 0 0 chr2 16389162 16389488 -234298366 - AluSx SINE Alu 0 330 5 363 44 0 0 chr2 16389571 16389616 -234298238 + (CA)n Simple_repeat Simple_repeat 2 46 0 585 266 110 86 chr2 16389931 16390502 -234297352 - L1MEd LINE L1 -4971 1148 564 226 269 106 28 chr2 16390921 16391062 -234296792 - L1MEd LINE L1 -5962 157 6 199 247 273 13 chr2 16391085 16391235 -234296619 + L2 LINE L2 3124 3312 -1 415 241 63 90 chr2 16391993 16392200 -234295654 + MIR3 SINE MIR 2 207 -1 197 258 121 32 chr2 16392771 16392895 -234294959 - L2 LINE L2 0 3313 3179 1030 201 50 65 chr2 16392897 16393176 -234294678 + ORSL DNA AcHobo 1 275 0 192 403 0 22 chr2 16394016 16394155 -234293699 + L2 LINE L2 2896 3031 -241 744 308 49 59 chr2 16395170 16395595 -234292259 - L2 LINE L2 -1 3312 2892 469 328 40 13 chr2 16395593 16395762 -234292092 - MIR SINE MIR -62 146 2 * 2382 200 29 2 chr2 16396846 16397261 -234290593 - MSTB LTR MaLR 0 426 1 877 261 58 0 chr2 16397834 16398060 -234289794 - MIR SINE MIR -8 254 16 405 281 41 8 chr2 16398075 16398196 -234289658 - MIR SINE MIR -59 149 25 598 279 42 6 chr2 16398365 16398530 -234289324 - MER5B DNA MER1_type 0 178 8 1363 176 35 24 chr2 16398810 16399099 -234288755 - MLT1A1 LTR MaLR -15 350 59 282 157 0 0 chr2 16399103 16399154 -234288700 + MLT1A2 LTR MaLR 56 106 -268 1190 210 71 118 chr2 16400957 16401137 -234286717 + MLT1C LTR MaLR 1 188 -279 2090 131 0 19 chr2 16401137 16401451 -234286403 + AluSc SINE Alu 1 308 -1 1190 210 71 118 chr2 16401451 16401760 -234286094 + MLT1C LTR MaLR 188 467 0 278 363 42 32 chr2 16402732 16402922 -234284932 - MIR SINE MIR -11 251 60 182 284 105 42 chr2 16403868 16403963 -234283891 + L2 LINE L2 358 458 -2856 511 254 150 22 chr2 16403970 16404337 -234283517 + LTR16A1 LTR ERVL 1 457 0 389 227 9 0 chr2 16404549 16404659 -234283195 + CT-rich Low_complexity Low_complexity 1 111 0 298 316 156 30 chr2 16404666 16405103 -234282751 + L2 LINE L2 967 1458 -1856 268 22 22 43 chr2 16405152 16405198 -234282656 + (CAAAAA)n Simple_repeat Simple_repeat 1 45 0 193 417 7 0 chr2 16405789 16405928 -234281926 + L2 LINE L2 2271 2410 -904 3387 78 16 0 chr2 16405948 16406383 -234281471 - MLT2A1 LTR ERVL 0 444 3 44245 76 13 1 chr2 16406385 16411970 -234275884 - HERVL-A1 LTR ERVL 0 5654 1 3322 84 9 9 chr2 16411970 16412409 -234275445 - MLT2A1 LTR ERVL 0 444 6 486 215 179 36 chr2 16412414 16412609 -234275245 + MLT1D LTR MaLR 16 238 -267 233 250 65 109 chr2 16413020 16413204 -234274650 - MIR3 SINE MIR 0 208 33 441 328 16 11 chr2 16415561 16415747 -234272107 - MIR3 SINE MIR -14 194 8 25 0 0 0 chr2 16415775 16415800 -234272054 + AT_rich Low_complexity Low_complexity 1 25 0 401 282 99 65 chr2 16416013 16416524 -234271330 - L2 LINE L2 -84 3229 2691 431 298 65 28 chr2 16416761 16416976 -234270878 + MIR SINE MIR 40 262 0 301 274 52 26 chr2 16417894 16418047 -234269807 + MIR SINE MIR 9 165 -97 2166 97 0 0 chr2 16418142 16418465 -234269389 + AluSg SINE Alu 1 323 0 299 257 47 41 chr2 16418761 16418932 -234268922 + L2 LINE L2 2514 2685 -629 895 112 8 8 chr2 16419519 16419653 -234268201 + L1MA4A LINE L1 5656 5789 -514 200 125 50 0 chr2 16419694 16419734 -234268120 + (TATATG)n Simple_repeat Simple_repeat 3 44 0 2824 151 44 4 chr2 16419751 16420248 -234267606 + L1MA4A LINE L1 5783 6299 -4 23 0 0 0 chr2 16420697 16420720 -234267134 + AT_rich Low_complexity Low_complexity 1 23 0 22 94 0 0 chr2 16420876 16420940 -234266914 + AT_rich Low_complexity Low_complexity 1 64 0 2837 146 162 9 chr2 16421733 16422283 -234265571 - MER51A LTR ERV1 0 634 1 213 154 0 0 chr2 16422669 16422708 -234265146 + (TG)n Simple_repeat Simple_repeat 2 40 0 254 282 0 0 chr2 16424405 16424476 -234263378 + L1MC/D LINE L1 5813 5883 -1925 366 328 35 11 chr2 16424594 16424768 -234263086 - L1ME LINE L1 -420 5701 5524 1855 236 65 35 chr2 16424883 16425403 -234262451 + MLT1E LTR MaLR 57 592 -1 321 311 33 38 chr2 16425962 16426145 -234261709 - LTR37B LTR ERV1 -270 198 17 264 243 9 103 chr2 16426998 16427105 -234260749 - MLT1H LTR MaLR 0 549 453 906 186 88 5 chr2 16427263 16427478 -234260376 - MLT1H LTR MaLR -316 233 1 365 275 11 0 chr2 16427526 16427617 -234260237 + MER82 DNA MER2_type 2 93 -560 1828 244 20 24 chr2 16428100 16428555 -234259299 + MER82 DNA MER2_type 201 653 0 277 293 28 0 chr2 16429496 16429602 -234258252 + L2 LINE L2 3153 3261 -11 216 228 0 0 chr2 16429617 16429674 -234258180 + GA-rich Low_complexity Low_complexity 1 57 0 188 178 22 178 chr2 16429817 16429907 -234257947 + MER5A DNA MER1_type 113 188 -1 266 184 40 40 chr2 16430390 16430466 -234257388 + Charlie7 DNA MER1_type 47 122 -2490 914 239 95 35 chr2 16430500 16430960 -234256894 + L2 LINE L2 2573 3061 -252 223 348 67 0 chr2 16431632 16431767 -234256087 - MIR SINE MIR -15 247 104 389 257 20 0 chr2 16432154 16432255 -234255599 - MER5A DNA MER1_type -77 112 10 609 148 95 143 chr2 16432279 16432468 -234255386 + MER58C DNA MER1_type 36 215 0 492 249 22 61 chr2 16433656 16433837 -234254017 - MIR SINE MIR -76 186 13 401 303 48 45 chr2 16434136 16434466 -234253388 + L1ME4a LINE L1 5569 5899 -222 1633 148 61 25 chr2 16434467 16434744 -234253110 + AluJo SINE Alu 1 287 -25 23 54 0 0 chr2 16434946 16434983 -234252871 + AT_rich Low_complexity Low_complexity 1 37 0 453 76 0 0 chr2 16435376 16435442 -234252412 + (TG)n Simple_repeat Simple_repeat 1 66 0 417 323 129 5 chr2 16436078 16436295 -234251559 - MIR SINE MIR -3 259 16 1708 231 17 3 chr2 16437357 16437717 -234250137 + MLT1A1 LTR MaLR 1 365 0 334 243 299 55 chr2 16437893 16438332 -234249522 + MLT1H1 LTR MaLR 1 552 -3 2254 101 59 34 chr2 16438362 16438717 -234249137 + THE1B LTR MaLR 1 364 0 265 258 30 15 chr2 16438804 16438870 -234248984 + MIR SINE MIR 37 103 -159 614 245 77 63 chr2 16439680 16439966 -234247888 + L2 LINE L2 3022 3311 -2 233 271 115 16 chr2 16440003 16440125 -234247729 + L2 LINE L2 3136 3269 -3 254 341 146 8 chr2 16440406 16440529 -234247325 + L2 LINE L2 3133 3272 0 1153 280 79 30 chr2 16440851 16441380 -234246474 + MLT1H1 LTR MaLR 1 555 0 1128 221 119 14 chr2 16442010 16442313 -234245541 + MLT1D LTR MaLR 32 390 -115 2440 143 2 10 chr2 16442315 16442708 -234245146 + MLT1B LTR MaLR 1 390 0 224 280 0 90 chr2 16442816 16442916 -234244938 + MIR SINE MIR 28 118 -144 2075 143 0 3 chr2 16443657 16443964 -234243890 - AluSx SINE Alu -6 306 1 1976 151 0 10 chr2 16443967 16444266 -234243588 - AluSx SINE Alu -16 296 1 370 333 0 25 chr2 16445217 16445379 -234242475 + GA-rich Low_complexity Low_complexity 4 161 0 21 36 0 0 chr2 16445498 16445526 -234242328 + AT_rich Low_complexity Low_complexity 1 28 0 246 267 264 17 chr2 16445736 16446024 -234241830 - L2 LINE L2 -86 3186 2828 224 269 10 67 chr2 16446320 16446424 -234241430 + MIR3 SINE MIR 96 193 -15 889 195 0 13 chr2 16446939 16447098 -234240756 - FRAM SINE Alu -19 157 1 255 252 81 36 chr2 16447360 16447471 -234240383 - MIR SINE MIR -30 232 117 360 159 0 0 chr2 16447945 16448008 -234239846 - MER31B LTR ERV1 0 466 404 2429 143 14 45 chr2 16448023 16448444 -234239410 + MER72 LTR ERV1 311 718 -4 192 375 39 16 chr2 16448535 16448663 -234239191 - MIR3 SINE MIR -64 144 14 1596 179 186 13 chr2 16448703 16448874 -234238980 + MER31B LTR ERV1 1 141 -325 2620 144 28 19 chr2 16448874 16449298 -234238556 - MSTA LTR MaLR 0 428 1 1596 179 186 13 chr2 16449298 16449523 -234238331 + MER31B LTR ERV1 141 466 0 489 188 42 0 chr2 16449545 16449640 -234238214 - MER72 LTR ERV1 -434 288 190 2242 113 3 0 chr2 16449640 16449942 -234237912 - THE1C LTR MaLR 0 375 73 2702 86 60 21 chr2 16449944 16450375 -234237479 - LTR7 LTR ERV1 -2 448 1 2621 94 43 33 chr2 16450375 16450969 -234236885 - HERVH LTR ERV1 0 7713 5600 4316 151 3 1 chr2 16450970 16451631 -234236223 - HERVH LTR ERV1 -2564 5149 4488 3468 104 6 0 chr2 16451633 16452124 -234235730 - HERVH LTR ERV1 -3720 3993 3500 890 149 20 0 chr2 16452123 16452271 -234235583 - HERVH LTR ERV1 -4423 3290 3140 * 20470 92 17 17 chr2 16452265 16455269 -234232585 - HERVH LTR ERV1 -4726 2987 1 2706 90 58 21 chr2 16455271 16455703 -234232151 - LTR7 LTR ERV1 -2 448 1 580 138 0 11 chr2 16455703 16455780 -234232074 - THE1C LTR MaLR -297 78 1 710 190 41 56 chr2 16455780 16455975 -234231879 - MER72 LTR ERV1 -528 194 3 602 252 35 0 chr2 16456031 16456174 -234231680 + MIR SINE MIR 7 154 -108 303 328 40 24 chr2 16456837 16456931 -234230923 + MIR SINE MIR 53 151 -111 1036 249 120 15 chr2 16456931 16457324 -234230530 - MER57B LTR ERV1 0 434 1 303 328 40 24 chr2 16457324 16457354 -234230500 + MIR SINE MIR 151 179 -83 1723 146 42 3 chr2 16457667 16457955 -234229899 - AluSx SINE Alu -11 301 3 276 338 186 8 chr2 16458027 16458290 -234229564 - L3 LINE CR1 -997 580 271 552 226 47 94 chr2 16458871 16459105 -234228749 + MER39 LTR ERV1 271 493 -214 29 28 0 0 chr2 16459697 16459733 -234228121 + AT_rich Low_complexity Low_complexity 1 36 0 955 112 13 0 chr2 16459745 16459897 -234227957 + MER11B LTR ERVK 1060 1213 -23 2397 40 28 31 chr2 16459971 16460296 -234227558 - LTR17 LTR ERV1 -456 324 1 998 47 0 0 chr2 16460296 16460423 -234227431 - HERV17 LTR ERV1 0 8626 8500 1544 159 116 29 chr2 16460569 16460845 -234227009 + AluJb SINE Alu 5 304 -8 2918 229 31 3 chr2 16460900 16461668 -234226186 - L1M3 LINE L1 -1053 5093 4304 680 191 6 67 chr2 16461663 16461784 -234226070 + L1M3 LINE L1 5086 5213 -933 * 2240 120 42 25 chr2 16461784 16462141 -234225713 - THE1B LTR MaLR -1 363 1 11773 93 10 0 chr2 16462141 16463705 -234224149 - THE1B-int LTR MaLR 0 1580 2 1928 135 93 9 chr2 16463706 16464040 -234223814 - THE1B LTR MaLR 0 364 3 680 191 6 67 chr2 16464040 16464093 -234223761 + L1M3 LINE L1 5211 5252 -894 2539 135 21 63 chr2 16464153 16464724 -234223130 + L1M3 LINE L1 5256 5802 -366 1007 319 42 33 chr2 16464752 16465590 -234222264 + L1MEc LINE L1 1266 2110 -4286 1579 311 9 33 chr2 16465592 16466171 -234221683 + L1ME1 LINE L1 35 599 -5797 1224 265 67 0 chr2 16466172 16466666 -234221188 + L1ME1 LINE L1 647 1173 -5223 578 275 0 30 chr2 16466688 16466950 -234220904 + L1ME1 LINE L1 2141 2394 -4002 2660 235 34 16 chr2 16467105 16467851 -234220003 + L1ME1 LINE L1 5472 6230 -5 32 26 0 0 chr2 16468840 16468879 -234218975 + AT_rich Low_complexity Low_complexity 1 39 0 614 245 13 0 chr2 16469189 16469348 -234218506 - L1ME2 LINE L1 -125 6039 5879 223 135 19 19 chr2 16469395 16469447 -234218407 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 1519 183 67 0 chr2 16469449 16469717 -234218137 - AluJb SINE Alu -26 286 1 1070 259 135 11 chr2 16469717 16470426 -234217428 - L1ME2 LINE L1 -275 5891 5092 269 237 97 9 chr2 16470491 16470605 -234217249 - L1MA7 LINE L1 -7 6284 6161 325 345 112 4 chr2 16470857 16471089 -234216765 - L1ME LINE L1 -597 5565 5309 1847 184 91 17 chr2 16471236 16471699 -234216155 - MLT1D LTR MaLR -7 498 2 2062 112 75 26 chr2 16472022 16472369 -234215485 - THE1B LTR MaLR 0 364 1 2980 199 28 18 chr2 16472388 16473071 -234214783 - MER54A LTR ERVL -7 894 15 641 387 58 17 chr2 16473483 16473845 -234214009 + L2 LINE L2 161 537 -2777 232 224 0 20 chr2 16473914 16473963 -234213891 + C-rich Low_complexity Low_complexity 1 48 0 1365 315 61 54 chr2 16474007 16475042 -234212812 + L2 LINE L2 2272 3308 -5 321 293 33 50 chr2 16475068 16475249 -234212605 - L1ME LINE L1 -871 5275 5098 423 326 143 9 chr2 16475487 16475717 -234212137 - MIR SINE MIR 0 262 2 264 289 148 44 chr2 16475734 16475869 -234211985 + MIR SINE MIR 52 200 -62 352 326 90 34 chr2 16476355 16476588 -234211266 - L3 LINE CR1 -40 1537 1292 258 203 39 23 chr2 16476588 16476706 -234211148 + (TA)n Simple_repeat Simple_repeat 2 124 -7 207 0 0 0 chr2 16476706 16476729 -234211125 + (CA)n Simple_repeat Simple_repeat 2 24 0 258 203 39 23 chr2 16476729 16476738 -234211116 + (TA)n Simple_repeat Simple_repeat 124 131 0 300 280 247 27 chr2 16476751 16476789 -234211065 - L3 LINE CR1 -291 1286 1258 1232 195 121 76 chr2 16476789 16477276 -234210578 + LTR54 LTR ERV1 1 509 -1 300 280 247 27 chr2 16477276 16477423 -234210431 - L3 LINE CR1 -319 1258 1060 6241 51 4 0 chr2 16477453 16478259 -234209595 - L1PA7 LINE L1 0 6154 5346 475 309 58 16 chr2 16479320 16479511 -234208343 + MIR SINE MIR 4 202 -60 389 304 104 0 chr2 16479550 16479665 -234208189 - MER91B DNA MER1_type -44 146 20 22 0 0 0 chr2 16480066 16480088 -234207766 + AT_rich Low_complexity Low_complexity 1 22 0 719 322 142 34 chr2 16480227 16481089 -234206765 + L2 LINE L2 2377 3313 0 2399 180 9 5 chr2 16481135 16481584 -234206270 - LOR1b LTR ERV1 -10 451 1 28 61 0 0 chr2 16481851 16481900 -234205954 + AT_rich Low_complexity Low_complexity 1 49 0 454 203 17 0 chr2 16482161 16482279 -234205575 + CT-rich Low_complexity Low_complexity 2 121 0 13945 142 22 20 chr2 16482724 16484722 -234203132 - Tigger1 DNA MER2_type 0 2418 410 1277 161 203 0 chr2 16484722 16484988 -234202866 - AluSp SINE Alu 0 314 1 13945 142 22 20 chr2 16484988 16485400 -234202454 - Tigger1 DNA MER2_type -2008 410 1 323 302 9 19 chr2 16486490 16486596 -234201258 + MIR3 SINE MIR 50 154 -54 23 33 0 0 chr2 16487227 16487257 -234200597 + AT_rich Low_complexity Low_complexity 1 30 0 410 231 30 41 chr2 16487275 16487444 -234200410 - L1MC5 LINE L1 -76 7885 7719 234 174 0 0 chr2 16487513 16487559 -234200295 + (TA)n Simple_repeat Simple_repeat 1 46 0 339 235 0 0 chr2 16487631 16487716 -234200138 + MER53 DNA DNA 97 181 -8 1170 213 46 72 chr2 16487746 16488315 -234199539 - L1MC5 LINE L1 -299 7662 7109 29 28 0 0 chr2 16488344 16488380 -234199474 + AT_rich Low_complexity Low_complexity 1 36 0 485 324 163 28 chr2 16488538 16488961 -234198893 - L1MC4a LINE L1 -1633 6175 5696 40 21 0 0 chr2 16489324 16489371 -234198483 + AT_rich Low_complexity Low_complexity 1 47 0 30 0 0 0 chr2 16490239 16490269 -234197585 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr2 16490369 16490389 -234197465 + (T)n Simple_repeat Simple_repeat 1 20 0 1959 104 3 13 chr2 16490589 16490898 -234196956 + MSTA-int LTR MaLR 1275 1580 0 1746 150 200 11 chr2 16490898 16491258 -234196596 + MSTA LTR MaLR 1 428 0 368 327 0 0 chr2 16491264 16491374 -234196480 + MER81 DNA DNA 5 114 0 202 374 42 24 chr2 16492260 16492426 -234195428 + MIR3 SINE MIR 40 208 0 1789 166 28 0 chr2 16492791 16493081 -234194773 - AluJb SINE Alu -14 298 1 265 246 31 0 chr2 16493636 16493701 -234194153 + MSTC LTR MaLR 6 72 -356 715 312 39 13 chr2 16493701 16493932 -234193922 - MIR SINE MIR -23 239 3 249 139 0 0 chr2 16494740 16494783 -234193071 + (TTCCC)n Simple_repeat Simple_repeat 3 45 0 339 338 70 6 chr2 16495343 16495500 -234192354 + L1MEc LINE L1 36 202 -6194 385 251 59 39 chr2 16495528 16495731 -234192123 + L1ME2 LINE L1 5949 6155 -9 1584 169 33 4 chr2 16498088 16498403 -234189451 + AluJb SINE Alu 1 323 0 192 239 0 0 chr2 16498460 16498506 -234189348 + MIR SINE MIR 66 111 -97 402 294 132 35 chr2 16499226 16499515 -234188339 + L2 LINE L2 2083 2399 -915 360 0 0 0 chr2 16500071 16500111 -234187743 + (CA)n Simple_repeat Simple_repeat 1 40 0 210 91 0 0 chr2 16501227 16501260 -234186594 + (TATG)n Simple_repeat Simple_repeat 2 34 0 2312 81 0 0 chr2 16501267 16501574 -234186280 - L1PA8A LINE L1 -18 6113 5807 2223 116 0 3 chr2 16501885 16502216 -234185638 + AluSg SINE Alu 1 330 0 1652 179 47 0 chr2 16502833 16503112 -234184742 + AluJb SINE Alu 13 304 -8 340 315 108 21 chr2 16503304 16503620 -234184234 + L2 LINE L2 1840 2243 -1071 185 372 58 45 chr2 16503685 16503841 -234184013 + L2 LINE L2 2394 2551 -763 223 191 44 44 chr2 16504013 16504081 -234183773 + (TAAAG)n Simple_repeat Simple_repeat 5 72 0 221 317 12 24 chr2 16504520 16504602 -234183252 + L2 LINE L2 3227 3307 -6 348 246 56 56 chr2 16505040 16505182 -234182672 + HERVL40 LTR ERVL 3642 3783 -1747 2095 141 0 3 chr2 16505184 16505496 -234182358 - AluSq SINE Alu 0 313 3 1717 246 28 43 chr2 16505497 16505582 -234182272 + HERVL40 LTR ERVL 3769 3854 -1676 1236 153 161 15 chr2 16505582 16505843 -234182011 - AluJo SINE Alu -3 299 1 1717 246 28 43 chr2 16505843 16506290 -234181564 + HERVL40 LTR ERVL 3854 4293 -1237 705 304 21 12 chr2 16506286 16506529 -234181325 + HERVL40 LTR ERVL 4427 4671 -859 * 1254 59 5 48 chr2 16506930 16507117 -234180737 - L1PA11 LINE L1 -2 6172 5994 963 225 15 59 chr2 16507645 16507976 -234179878 + HERVL40 LTR ERVL 2803 5522 -8 1241 267 65 29 chr2 16507988 16508434 -234179420 + LTR40b LTR ERVL 1 462 0 451 357 30 30 chr2 16508616 16508885 -234178969 - L3 LINE CR1 -242 1335 1067 1108 187 24 125 chr2 16509100 16509469 -234178385 + MLT1C LTR MaLR 59 390 0 1261 188 110 99 chr2 16509475 16509845 -234178009 - MLT1D LTR MaLR 0 505 127 1971 154 7 0 chr2 16509845 16510138 -234177716 - AluSx SINE Alu -17 295 1 1261 188 110 99 chr2 16510138 16510241 -234177613 - MLT1D LTR MaLR -378 127 27 383 122 51 0 chr2 16510250 16510348 -234177506 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 229 294 49 29 chr2 16510774 16510876 -234176978 - L2 LINE L2 -32 3240 3137 329 258 371 0 chr2 16511569 16511728 -234176126 + MIR SINE MIR 4 221 -41 1021 252 35 46 chr2 16512403 16512903 -234174951 + PABL_B LTR ERV1 2 647 -20 304 308 53 81 chr2 16513150 16513397 -234174457 - L1M2a LINE L1 -6585 583 344 318 265 22 38 chr2 16514349 16514534 -234173320 - HAL1b LINE L1 -526 822 641 272 310 94 25 chr2 16514531 16514776 -234173078 - HAL1b LINE L1 -1004 344 83 * 497 249 20 43 chr2 16514937 16515159 -234172695 - L1ME LINE L1 -478 5686 5471 4666 180 29 3 chr2 16515164 16516667 -234171187 - L1PA16 LINE L1 0 6166 4628 2412 135 5 13 chr2 16516728 16517106 -234170748 + THE1C LTR MaLR 1 375 0 6151 61 2 44 chr2 16517203 16518352 -234169502 - L1PA7 LINE L1 -4 6150 4969 192 152 0 0 chr2 16519883 16519916 -234167938 + (CA)n Simple_repeat Simple_repeat 2 34 0 2325 91 3 0 chr2 16520813 16521109 -234166745 - AluSp SINE Alu -16 297 1 187 145 133 72 chr2 16522259 16522342 -234165512 - MIR SINE MIR -30 232 145 840 228 0 12 chr2 16522368 16522535 -234165319 + FRAM SINE Alu 2 166 -10 205 317 195 24 chr2 16522617 16522781 -234165073 + L3 LINE CR1 1375 1566 -11 311 271 42 0 chr2 16523132 16523250 -234164604 - L1ME4a LINE L1 -7 6114 5992 1322 196 99 35 chr2 16523325 16523455 -234164399 - Charlie1 DNA MER1_type -5 2756 2636 2149 59 44 0 chr2 16523455 16523767 -234164087 - AluY SINE Alu 0 324 1 1322 196 99 35 chr2 16523767 16524058 -234163796 - Charlie1 DNA MER1_type -125 2636 2307 707 210 6 54 chr2 16524064 16524110 -234163744 - Charlie1 DNA MER1_type -2602 159 112 2214 128 0 0 chr2 16524110 16524414 -234163440 + AluSg SINE Alu 1 304 -6 707 210 6 54 chr2 16524414 16524534 -234163320 - Charlie1 DNA MER1_type -2649 112 1 503 322 113 27 chr2 16524608 16524981 -234162873 - L1ME4a LINE L1 -339 5782 5378 1771 183 3 0 chr2 16525070 16525355 -234162499 - AluJb SINE Alu -25 287 2 1855 194 30 89 chr2 16525447 16525943 -234161911 - MLT1C LTR MaLR 0 467 1 225 264 107 50 chr2 16526138 16526259 -234161595 - MIR SINE MIR -50 212 85 312 263 117 23 chr2 16527015 16527186 -234160668 + L1ME3A LINE L1 5762 5948 -222 209 221 135 77 chr2 16527527 16527631 -234160223 - L2 LINE L2 -26 3287 3178 186 333 0 0 chr2 16527671 16527719 -234160135 + L2 LINE L2 2589 2636 -678 219 292 42 41 chr2 16527861 16528050 -234159804 + L2 LINE L2 2791 2970 -302 598 226 52 94 chr2 16531159 16531487 -234156367 + LTR37A LTR ERV1 111 424 -2 4525 134 10 34 chr2 16532272 16532733 -234155121 + L1PB4 LINE L1 5346 5780 -376 279 0 0 0 chr2 16532733 16532764 -234155090 + (CA)n Simple_repeat Simple_repeat 2 32 0 4525 134 10 34 chr2 16532764 16533133 -234154721 + L1PB4 LINE L1 5780 6156 0 248 322 56 22 chr2 16533167 16533257 -234154597 - L3 LINE CR1 -206 1371 1279 213 65 0 0 chr2 16533973 16534004 -234153850 + (TTA)n Simple_repeat Simple_repeat 3 33 0 13919 23 2 0 chr2 16534004 16536388 -234151466 - L1PA3 LINE L1 -18 6137 3750 9284 27 0 8 chr2 16536388 16537599 -234150255 + L1PA3 LINE L1 2555 3755 -2391 3422 129 27 15 chr2 16537670 16538191 -234149663 - MER1A DNA MER1_type 0 527 1 410 317 55 18 chr2 16539552 16539716 -234148138 - MIR SINE MIR -72 190 21 229 286 61 0 chr2 16541054 16541152 -234146702 - L1ME4a LINE L1 -26 6095 5992 271 206 130 54 chr2 16541166 16541258 -234146596 - L2 LINE L2 -17 3296 3198 553 259 85 21 chr2 16542288 16542477 -234145377 - MIR SINE MIR -15 247 47 481 211 16 0 chr2 16542686 16542814 -234145040 + CT-rich Low_complexity Low_complexity 3 132 0 537 187 32 8 chr2 16544294 16544417 -234143437 - L1MB7 LINE L1 0 6184 6059 3692 231 51 83 chr2 16544434 16544992 -234142862 - L1M4 LINE L1 -1876 4270 3696 2384 79 0 0 chr2 16544992 16545284 -234142570 + AluSp SINE Alu 1 292 -21 3692 231 51 83 chr2 16545284 16546136 -234141718 - L1M4 LINE L1 -2450 3696 2819 832 81 0 0 chr2 16546136 16546247 -234141607 - AluY SINE Alu -1 310 200 3692 231 51 83 chr2 16546247 16546605 -234141249 - L1M4 LINE L1 -3327 2819 2451 274 339 73 23 chr2 16546724 16546901 -234140953 - MIR SINE MIR -27 235 50 271 331 45 64 chr2 16547200 16547357 -234140497 + MIR SINE MIR 1 154 -108 397 214 151 31 chr2 16547626 16547785 -234140069 - L1M4 LINE L1 -2946 3200 3023 436 88 0 0 chr2 16547790 16547858 -234139996 - L1MA3 LINE L1 0 6305 6238 16267 103 9 15 chr2 16548176 16548905 -234138949 + Charlie3 DNA MER1_type 46 778 -1928 2076 147 13 32 chr2 16548905 16549285 -234138569 + THE1C LTR MaLR 1 373 -2 16267 103 9 15 chr2 16549285 16550991 -234136863 + Charlie3 DNA MER1_type 778 2467 -239 408 65 0 32 chr2 16550989 16551051 -234136803 + Charlie3 DNA MER1_type 2653 2712 0 * 339 354 10 29 chr2 16551445 16551651 -234136203 + L1MEd LINE L1 871 1072 -5047 1820 180 0 3 chr2 16551925 16552236 -234135618 - AluJo SINE Alu -2 310 1 325 256 53 23 chr2 16552375 16552508 -234135346 + HAL1 LINE L1 1500 1636 -871 221 224 15 15 chr2 16552651 16552718 -234135136 + A-rich Low_complexity Low_complexity 3 69 0 25 75 0 0 chr2 16553038 16553091 -234134763 + AT_rich Low_complexity Low_complexity 1 53 0 24 0 0 0 chr2 16553494 16553518 -234134336 + AT_rich Low_complexity Low_complexity 1 24 0 462 309 111 36 chr2 16553597 16553904 -234133950 + L1M4 LINE L1 4034 4363 -1783 309 289 27 52 chr2 16553981 16554215 -234133639 + L1M4 LINE L1 4640 4867 -1279 558 278 69 0 chr2 16554756 16554929 -234132925 + MER45B DNA AcHobo 153 337 -703 2371 175 39 0 chr2 16554931 16555422 -234132432 + MER45B DNA AcHobo 520 1029 -11 2053 146 0 31 chr2 16555776 16556098 -234131756 - AluSx SINE Alu 0 312 1 26 0 0 0 chr2 16556338 16556364 -234131490 + AT_rich Low_complexity Low_complexity 1 26 0 760 95 0 95 chr2 16556365 16556502 -234131352 - FLAM_C SINE Alu 0 143 20 27 0 0 0 chr2 16556531 16556558 -234131296 + AT_rich Low_complexity Low_complexity 1 27 0 737 86 0 243 chr2 16558446 16558668 -234129186 - MLT2A1 LTR ERVL 0 444 277 1057 86 33 0 chr2 16558669 16558820 -234129034 - LTR1 LTR ERV1 -196 589 434 2696 134 25 16 chr2 16558895 16559344 -234128510 + HUERS-P2 LTR ERV1 2631 3083 -5 3776 150 42 70 chr2 16559391 16560199 -234127655 + LTR1 LTR ERV1 1 785 0 1197 99 0 0 chr2 16560201 16560372 -234127482 - HERVL-A1 LTR ERVL -2313 3341 3171 1073 81 7 0 chr2 16560369 16560518 -234127336 + HERVL LTR ERVL 1708 1857 -3797 * 22539 85 12 7 chr2 16560514 16563246 -234124608 - HERVL-A1 LTR ERVL -2486 3168 452 240 35 0 0 chr2 16563246 16563275 -234124579 + (TA)n Simple_repeat Simple_repeat 2 30 0 1543 23 0 0 chr2 16563276 16563452 -234124402 - L1PA5 LINE L1 -11 6143 5968 22539 85 12 7 chr2 16563452 16563868 -234123986 - HERVL-A1 LTR ERVL -5201 453 1 3330 73 35 0 chr2 16563868 16564295 -234123559 - MLT2A1 LTR ERVL 0 444 3 23 33 0 0 chr2 16564450 16564480 -234123374 + AT_rich Low_complexity Low_complexity 1 30 0 2033 112 47 0 chr2 16564825 16565103 -234122751 + AluSx SINE Alu 1 291 -21 319 231 103 0 chr2 16565322 16565400 -234122454 - L2 LINE L2 -36 3277 3192 2095 124 7 0 chr2 16565424 16565734 -234122120 + AluSg SINE Alu 1 312 0 957 233 19 20 chr2 16566155 16566432 -234121422 - MLT2D LTR ERVL -72 342 66 22 35 0 0 chr2 16566501 16566530 -234121324 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 16566592 16566614 -234121240 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr2 16566631 16566670 -234121184 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 16567094 16567115 -234120739 + AT_rich Low_complexity Low_complexity 1 21 0 2118 92 0 14 chr2 16567215 16567497 -234120357 + AluY SINE Alu 1 278 -33 374 315 159 19 chr2 16567586 16567894 -234119960 + L1ME LINE L1 5386 5736 -434 1983 173 12 26 chr2 16567968 16568390 -234119464 - Tigger2a DNA MER2_type -7 427 12 1879 153 45 11 chr2 16568445 16568798 -234119056 - L1PB4 LINE L1 -2 6154 5790 27 0 0 0 chr2 16569109 16569136 -234118718 + AT_rich Low_complexity Low_complexity 1 27 0 2136 137 50 6 chr2 16569742 16570101 -234117753 - THE1C LTR MaLR 0 375 1 279 224 0 13 chr2 16570112 16570188 -234117666 - MLT1J LTR MaLR -10 501 427 27979 73 16 6 chr2 16570215 16574025 -234113829 + HERVL-A2 LTR ERVL 1808 5654 0 739 79 26 0 chr2 16574025 16574139 -234113715 + MLT2A2 LTR ERVL 1 117 -336 916 113 60 0 chr2 16574139 16574290 -234113564 + MLT2A1 LTR ERVL 285 444 0 744 271 5 0 chr2 16574421 16574613 -234113241 - MLT1J LTR MaLR -318 193 1 26 0 0 0 chr2 16575130 16575156 -234112698 + AT_rich Low_complexity Low_complexity 1 26 0 213 39 0 0 chr2 16575183 16575209 -234112645 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 680 178 0 68 chr2 16575209 16575355 -234112499 + MER2 DNA MER2_type 1 136 -209 236 48 0 214 chr2 16575375 16575459 -234112395 - L1MA2 LINE L1 0 6304 6239 486 75 88 0 chr2 16575459 16575539 -234112315 + L1MA1 LINE L1 6081 6167 -135 950 123 18 24 chr2 16575539 16575709 -234112145 + MER2 DNA MER2_type 122 290 -55 21 0 0 0 chr2 16575891 16575912 -234111942 + AT_rich Low_complexity Low_complexity 1 21 0 2501 50 3 3 chr2 16576687 16576987 -234110867 + AluY SINE Alu 1 300 -11 21 36 0 0 chr2 16577479 16577507 -234110347 + AT_rich Low_complexity Low_complexity 1 28 0 251 193 35 0 chr2 16578128 16578185 -234109669 + GA-rich Low_complexity Low_complexity 3 61 0 257 408 8 8 chr2 16579159 16579279 -234108575 - MIR SINE MIR -66 142 23 258 275 208 20 chr2 16579877 16580026 -234107828 + L2 LINE L2 3112 3288 -25 230 228 41 76 chr2 16580428 16580494 -234107360 + MER65B LTR ERV1 2 69 -462 1975 124 112 6 chr2 16580494 16580833 -234107021 + THE1C LTR MaLR 1 375 0 230 228 41 76 chr2 16580833 16580911 -234106943 + MER65B LTR ERV1 69 141 -390 21 0 0 0 chr2 16581271 16581292 -234106562 + AT_rich Low_complexity Low_complexity 1 21 0 277 322 31 46 chr2 16581725 16581986 -234105868 + MER65A LTR ERV1 187 443 -2 226 150 0 0 chr2 16581994 16582034 -234105820 + LTR67 LTR ERVL 497 536 -21 27 29 0 0 chr2 16582499 16582533 -234105321 + AT_rich Low_complexity Low_complexity 1 34 0 311 288 12 0 chr2 16583111 16583191 -234104663 + MIR3 SINE MIR 112 192 -16 250 368 128 32 chr2 16583383 16583914 -234103940 - L2 LINE L2 -154 3118 2535 3073 137 16 11 chr2 16584096 16584660 -234103194 - L1PBa LINE L1 -4829 2034 1468 257 372 37 34 chr2 16585215 16585511 -234102343 + L1MEc LINE L1 137 433 -5963 629 258 40 33 chr2 16585774 16586224 -234101630 + L1MEc LINE L1 670 4266 -1949 884 191 21 2 chr2 16586438 16586653 -234101201 - L1MA8 LINE L1 -361 5939 5724 1605 161 62 4 chr2 16587002 16587276 -234100578 + AluJo SINE Alu 1 290 -22 264 57 0 0 chr2 16588276 16588311 -234099543 + MADE1 DNA Mariner 46 80 0 552 284 110 21 chr2 16588735 16588971 -234098883 - MIR SINE MIR -3 259 3 3891 138 30 28 chr2 16589015 16589725 -234098129 - MER50 LTR ERV1 -23 711 1 189 289 0 0 chr2 16590302 16590347 -234097507 - L3 LINE CR1 -9 1568 1524 379 368 42 10 chr2 16591061 16591254 -234096600 + MIR SINE MIR 1 199 -63 571 135 129 31 chr2 16592830 16592993 -234094861 - MER53 DNA DNA -1 188 10 930 223 45 18 chr2 16593103 16593323 -234094531 + MIR SINE MIR 31 256 -6 327 301 34 91 chr2 16594051 16594260 -234093594 + MIR SINE MIR 10 206 -56 478 150 24 24 chr2 16595157 16595284 -234092570 + GA-rich Low_complexity Low_complexity 4 130 0 22 35 0 0 chr2 16597838 16597867 -234089987 + AT_rich Low_complexity Low_complexity 1 29 0 595 197 98 0 chr2 16597916 16598038 -234089816 + AluJo SINE Alu 1 134 -178 26 30 0 0 chr2 16598039 16598072 -234089782 + AT_rich Low_complexity Low_complexity 1 33 0 284 193 0 35 chr2 16598593 16598650 -234089204 + MIR3 SINE MIR 127 181 -27 240 167 0 0 chr2 16598765 16598813 -234089041 + (TGGA)n Simple_repeat Simple_repeat 4 51 0 1564 198 46 48 chr2 16598961 16599128 -234088726 + MLT2D LTR ERVL 1 167 -247 1902 169 36 3 chr2 16599128 16599460 -234088394 + MER61A LTR ERV1 1 343 0 1564 198 46 48 chr2 16599460 16599707 -234088147 + MLT2D LTR ERVL 167 414 0 203 333 26 0 chr2 16600228 16600306 -234087548 + L2 LINE L2 3234 3313 0 209 325 162 0 chr2 16601154 16601271 -234086583 - MIR SINE MIR -65 197 62 228 398 26 18 chr2 16601355 16601468 -234086386 + L2 LINE L2 3138 3251 -21 874 300 108 27 chr2 16601880 16602115 -234085739 + L2 LINE L2 2905 3182 -131 210 71 0 0 chr2 16602115 16602143 -234085711 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 874 300 108 27 chr2 16602143 16602277 -234085577 + L2 LINE L2 3182 3304 -9 260 236 0 14 chr2 16602370 16602442 -234085412 + LTR66 LTR ERVL 368 438 -172 221 350 0 48 chr2 16652948 16653051 -234034803 + MIR SINE MIR 33 130 -78 354 156 0 0 chr2 16654116 16654180 -234033674 + (CA)n Simple_repeat Simple_repeat 2 65 0 316 250 0 0 chr2 16654211 16654283 -234033571 - MIR SINE MIR -106 156 85 704 234 40 54 chr2 16654679 16654901 -234032953 - MER20 DNA MER1_type 0 219 1 1489 158 23 4 chr2 16655246 16655512 -234032342 + MSTA LTR MaLR 1 271 -157 199 238 12 24 chr2 16655636 16655720 -234032134 + G-rich Low_complexity Low_complexity 6 88 0 201 349 0 12 chr2 16655721 16655807 -234032047 + GA-rich Low_complexity Low_complexity 2 86 0 453 181 75 30 chr2 16655916 16656049 -234031805 + MSTA LTR MaLR 290 428 0 442 311 221 23 chr2 16656473 16656570 -234031284 - L2 LINE L2 -135 3178 3102 1002 79 0 7 chr2 16656570 16656710 -234031144 - MER85 DNA T2_type 0 139 1 442 311 221 23 chr2 16656710 16657141 -234030713 - L2 LINE L2 -211 3102 2543 353 353 86 11 chr2 16657890 16658077 -234029777 - L1ME3A LINE L1 -8 6162 5962 1017 249 24 90 chr2 16658176 16658685 -234029169 - L1MC5 LINE L1 -452 7509 7035 929 213 206 22 chr2 16660079 16660351 -234027503 + MSTD LTR MaLR 1 322 -74 1245 159 171 27 chr2 16660365 16660619 -234027235 + MSTA LTR MaLR 1 306 -69 2410 118 21 16 chr2 16660619 16660992 -234026862 + THE1C LTR MaLR 1 375 0 1245 159 171 27 chr2 16660992 16661074 -234026780 + MSTA LTR MaLR 306 375 0 1272 301 91 60 chr2 16661074 16662486 -234025368 - L2 LINE L2 -32 3281 1820 510 165 173 45 chr2 16662833 16662966 -234024888 + MER3 DNA MER1_type 60 209 0 413 226 60 0 chr2 16662966 16663007 -234024847 - MER3 DNA MER1_type -162 47 2 188 257 95 68 chr2 16663850 16663924 -234023930 - MIR3 SINE MIR -50 158 83 276 331 53 38 chr2 16664390 16664523 -234023331 - L2 LINE L2 -4 3268 3134 294 240 140 10 chr2 16664662 16664762 -234023092 + LTR50 LTR ERVL 104 216 -579 267 185 56 0 chr2 16664788 16664842 -234023012 + LTR50 LTR ERVL 328 384 -411 25 31 0 0 chr2 16664981 16665013 -234022841 + AT_rich Low_complexity Low_complexity 1 32 0 279 304 13 0 chr2 16665097 16665176 -234022678 + ERVL LTR ERVL 580 659 -5105 2182 98 0 44 chr2 16665177 16665493 -234022361 - AluSg SINE Alu -8 302 1 406 325 79 25 chr2 16665620 16665900 -234021954 + ERVL LTR ERVL 856 1150 -4614 858 188 24 6 chr2 16665921 16666086 -234021768 + MLT1D LTR MaLR 338 505 0 242 252 96 35 chr2 16666499 16666614 -234021240 - L2 LINE L2 -227 3086 2965 1949 158 3 0 chr2 16667170 16667480 -234020374 + AluSq SINE Alu 3 313 0 1760 192 0 19 chr2 16668294 16668601 -234019253 + AluJb SINE Alu 1 301 -11 1705 164 4 0 chr2 16668699 16668968 -234018886 + AluSq SINE Alu 1 270 -43 392 196 17 73 chr2 16668975 16669154 -234018700 + (CACCC)n Simple_repeat Simple_repeat 3 171 0 293 306 115 32 chr2 16669877 16670034 -234017820 + MIR SINE MIR 93 262 0 1872 188 35 35 chr2 16670898 16671446 -234016408 + MLT2A2 LTR ERVL 3 554 0 21 0 0 0 chr2 16671465 16671486 -234016368 + AT_rich Low_complexity Low_complexity 1 21 0 2129 197 38 20 chr2 16671533 16672040 -234015814 - L1MB7 LINE L1 -7 6177 5662 775 243 19 34 chr2 16672036 16672304 -234015550 - L1MB7 LINE L1 -1612 4534 4271 * 443 270 9 0 chr2 16672308 16672423 -234015431 - L1MB7 LINE L1 -2234 3912 3797 208 278 10 0 chr2 16672522 16672619 -234015235 + (TA)n Simple_repeat Simple_repeat 2 99 0 2370 279 105 23 chr2 16672688 16673240 -234014614 - L1MB7 LINE L1 -2416 3730 3225 2376 87 0 7 chr2 16673240 16673550 -234014304 - AluSx SINE Alu -4 308 1 2370 279 105 23 chr2 16673550 16674168 -234013686 - L1MB7 LINE L1 -2921 3225 2442 258 81 0 0 chr2 16674168 16674205 -234013649 + (TG)n Simple_repeat Simple_repeat 2 38 0 2370 279 105 23 chr2 16674205 16674318 -234013536 - L1MB7 LINE L1 -3704 2442 2340 * 4164 234 72 77 chr2 16674317 16675763 -234012091 - L1M4c LINE L1 -4146 2679 1228 2154 106 0 3 chr2 16675763 16676082 -234011772 - AluSx SINE Alu 0 318 1 4164 234 72 77 chr2 16676082 16676208 -234011646 - L1M4c LINE L1 -5597 1228 1103 231 88 0 0 chr2 16676208 16676242 -234011612 + (TTG)n Simple_repeat Simple_repeat 3 36 0 4164 234 72 77 chr2 16676242 16677173 -234010681 - L1M4c LINE L1 -5722 1103 17 21 36 0 0 chr2 16677187 16677215 -234010639 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 16679376 16679397 -234008457 + AT_rich Low_complexity Low_complexity 1 21 0 12851 176 36 15 chr2 16679756 16679922 -234007932 - L1MA3 LINE L1 -11 7713 7552 2128 123 0 0 chr2 16679922 16680214 -234007640 + AluSg SINE Alu 3 294 -16 12851 176 36 15 chr2 16680214 16683812 -234004042 - L1MA3 LINE L1 -172 7552 3866 451 87 43 0 chr2 16683795 16683864 -234003990 - L1MA3 LINE L1 -3927 3638 3567 * 10792 186 78 31 chr2 16683866 16685498 -234002356 - L1MA3 LINE L1 -4099 3466 2012 7904 97 11 17 chr2 16685498 16687478 -234000376 - L1PA8 LINE L1 0 6172 4198 10792 186 78 31 chr2 16687478 16688956 -233998898 - L1MA3 LINE L1 -5553 2012 605 260 273 67 79 chr2 16689074 16689239 -233998615 + MER103 DNA DNA 3 165 -1 385 336 24 8 chr2 16689725 16689850 -233998004 + MIR SINE MIR 34 160 -102 1554 178 14 14 chr2 16690490 16690777 -233997077 + AluJo SINE Alu 1 287 -25 253 262 85 61 chr2 16691973 16692137 -233995717 - L2 LINE L2 -37 3276 3109 262 338 83 7 chr2 16692446 16692591 -233995263 - MLT1L LTR MaLR -392 223 68 218 306 106 12 chr2 16692599 16692684 -233995170 - L2 LINE L2 -266 3047 2955 306 271 35 0 chr2 16692695 16692780 -233995074 - MIR SINE MIR -8 254 167 1000 139 6 0 chr2 16692782 16692940 -233994914 - MLT2D LTR ERVL -246 168 10 1288 315 192 28 chr2 16693040 16694293 -233993561 + L2 LINE L2 931 2389 -925 271 287 13 70 chr2 16694428 16694585 -233993269 - Charlie8 DNA MER1_type -2182 235 88 1668 197 14 40 chr2 16694808 16695178 -233992676 - MLT1A1 LTR MaLR 0 365 6 12648 149 29 33 chr2 16695549 16697594 -233990260 + Tigger1 DNA MER2_type 1 2051 -367 1483 195 44 0 chr2 16697594 16697891 -233989963 + AluJb SINE Alu 3 312 0 12648 149 29 33 chr2 16697891 16698100 -233989754 + Tigger1 DNA MER2_type 2051 2249 -169 2142 116 7 0 chr2 16698100 16698392 -233989462 + AluSx SINE Alu 1 294 -18 12648 149 29 33 chr2 16698392 16698562 -233989292 + Tigger1 DNA MER2_type 2249 2418 0 1625 205 22 11 chr2 16698708 16699074 -233988780 - L1MB1 LINE L1 -349 5819 5450 1301 173 88 10 chr2 16699071 16699378 -233988476 + L1MB1 LINE L1 5852 6139 -50 * 1175 158 37 20 chr2 16699778 16700024 -233987830 + L1MA10 LINE L1 6082 6331 -3 302 262 161 36 chr2 16701343 16701511 -233986343 - MIR SINE MIR -54 208 20 239 259 222 19 chr2 16701545 16701653 -233986201 + MIR3 SINE MIR 73 202 -6 1630 213 124 7 chr2 16701695 16702098 -233985756 - LTR40a LTR ERVL 0 519 70 225 334 158 42 chr2 16702236 16702834 -233985020 - L2 LINE L2 -23 3249 2581 26 0 0 0 chr2 16702834 16702860 -233984994 + AT_rich Low_complexity Low_complexity 1 26 0 652 264 50 88 chr2 16703002 16703263 -233984591 + MIR SINE MIR 12 262 0 26 0 0 0 chr2 16703403 16703429 -233984425 + AT_rich Low_complexity Low_complexity 1 26 0 5067 134 10 11 chr2 16703429 16704232 -233983622 - L1PA15 LINE L1 -3 6162 5361 182 268 54 0 chr2 16704620 16704676 -233983178 + MIR SINE MIR 74 132 -130 278 177 42 42 chr2 16705850 16705946 -233981908 - L1M4 LINE L1 -410 5774 5679 3355 221 32 28 chr2 16706172 16707057 -233980797 - L1M3 LINE L1 -705 5473 4577 1876 141 40 45 chr2 16707057 16707434 -233980420 - THE1C LTR MaLR 0 375 1 3355 221 32 28 chr2 16707434 16707655 -233980199 - L1M3 LINE L1 -1601 4577 4358 * 6689 204 17 22 chr2 16707653 16707705 -233980149 - L1MC1 LINE L1 -1 6332 6281 2376 21 11 4 chr2 16707705 16707985 -233979869 + AluY SINE Alu 17 298 -13 6689 204 17 22 chr2 16707985 16708941 -233978913 - L1MC1 LINE L1 -52 6281 5321 486 160 59 0 chr2 16708941 16709060 -233978794 - L1MA5 LINE L1 -4 6296 6171 6689 204 17 22 chr2 16709060 16710952 -233976902 - L1MC1 LINE L1 -1012 5321 3443 4126 206 28 10 chr2 16710955 16711277 -233976577 - L1M4 LINE L1 -377 6299 5984 4037 142 14 1 chr2 16711277 16711945 -233975909 - L1PA15 LINE L1 -6 6159 5484 1569 36 20 0 chr2 16711951 16712147 -233975707 - L1PA4 LINE L1 0 6155 5956 4126 206 28 10 chr2 16712147 16713119 -233974735 - L1M4 LINE L1 -696 5980 4974 966 227 4 19 chr2 16713123 16713379 -233974475 + L1P LINE L1 4202 4453 -1693 10400 164 22 9 chr2 16713392 16715225 -233972629 - Tigger1 DNA MER2_type -562 1856 1 4951 258 78 52 chr2 16715230 16718387 -233969467 - L1M4c LINE L1 -3291 3353 1 21 0 0 0 chr2 16719063 16719084 -233968770 + AT_rich Low_complexity Low_complexity 1 21 0 197 216 0 0 chr2 16719663 16719700 -233968154 + L3 LINE CR1 1535 1571 -6 2169 128 7 0 chr2 16719816 16720113 -233967741 - AluSx SINE Alu -11 301 3 9204 134 33 14 chr2 16720113 16721598 -233966256 - THE1C-int LTR MaLR -67 1513 1 1108 122 70 52 chr2 16721604 16721833 -233966021 - THE1C LTR MaLR -5 370 138 313 219 0 0 chr2 16721834 16721898 -233965956 - L1PB4 LINE L1 -55 6101 6038 238 359 132 0 chr2 16721900 16722067 -233965787 + L2 LINE L2 2860 3048 -265 1123 312 147 35 chr2 16722386 16722869 -233964985 + L2 LINE L2 1797 2225 -1088 2132 145 3 0 chr2 16722869 16723173 -233964681 - AluSx SINE Alu -7 305 1 1123 312 147 35 chr2 16723173 16724041 -233963813 + L2 LINE L2 2225 3313 0 359 282 145 0 chr2 16724501 16724618 -233963236 - L2 LINE L2 0 3313 3180 1097 306 63 27 chr2 16724657 16725102 -233962752 - L2 LINE L2 0 3313 2853 408 326 94 56 chr2 16725118 16725458 -233962396 + L2 LINE L2 2820 3172 -100 180 183 14 28 chr2 16725492 16725563 -233962291 + GA-rich Low_complexity Low_complexity 2 71 0 358 153 0 47 chr2 16726099 16726184 -233961670 - L1PA11 LINE L1 0 6174 6094 2201 95 3 0 chr2 16727361 16727657 -233960197 - AluY SINE Alu -14 297 1 564 304 91 42 chr2 16728355 16729223 -233958631 + L1MC4a LINE L1 4109 5019 -1127 2071 251 118 42 chr2 16729429 16729813 -233958041 + L1MC4a LINE L1 5254 5608 -2200 2283 109 0 0 chr2 16729813 16730124 -233957730 + AluSq SINE Alu 1 311 -2 2071 251 118 42 chr2 16730124 16730680 -233957174 + L1MC4a LINE L1 5608 6265 -1543 415 335 28 6 chr2 16731038 16731214 -233956640 + MIR SINE MIR 14 193 -69 241 348 26 0 chr2 16731268 16731383 -233956471 + L2 LINE L2 3196 3313 0 271 454 27 6 chr2 16732527 16732710 -233955144 + MIR3 SINE MIR 5 191 -17 439 234 28 48 chr2 16732753 16732898 -233954956 - MIR3 SINE MIR -48 160 19 22 70 0 0 chr2 16733033 16733076 -233954778 + AT_rich Low_complexity Low_complexity 1 43 0 347 274 34 26 chr2 16733182 16733299 -233954555 + MIR SINE MIR 109 226 -36 196 211 0 19 chr2 16733314 16733366 -233954488 - MIR SINE MIR -107 155 105 379 364 29 12 chr2 16733448 16733621 -233954233 + MIR SINE MIR 13 188 -74 2151 133 96 20 chr2 16734281 16734679 -233953175 - MSTA LTR MaLR 0 428 1 291 332 216 29 chr2 16735073 16735383 -233952471 + L3 LINE CR1 438 805 -772 658 256 6 0 chr2 16735583 16735755 -233952099 + MER119 DNA MER1_type 106 278 -305 239 323 0 0 chr2 16736139 16736201 -233951653 + L2 LINE L2 2914 2975 -339 2546 172 32 8 chr2 16736241 16736335 -233951519 - L1MC2 LINE L1 -296 6037 5947 1808 161 39 0 chr2 16736335 16736665 -233951189 - L1MC2 LINE L1 -5 6339 5997 2546 172 32 8 chr2 16736665 16737129 -233950725 - L1MC2 LINE L1 -386 5947 5464 199 205 0 0 chr2 16738165 16738204 -233949650 + MIR SINE MIR 66 104 -104 260 353 23 23 chr2 16739307 16739440 -233948414 - MIR3 SINE MIR -11 197 65 222 37 0 0 chr2 16739685 16739712 -233948142 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 296 350 29 21 chr2 16740586 16740726 -233947128 - MIR SINE MIR -108 154 14 1476 196 16 57 chr2 16741276 16741664 -233946190 + MLT1A2 LTR MaLR 1 372 -2 1637 180 9 25 chr2 16742521 16742838 -233945016 - AluJo SINE Alu 0 312 1 637 225 107 24 chr2 16743943 16744232 -233943622 + HsTC2 DNA Tc2 1584 1896 -2 346 333 96 10 chr2 16744367 16744658 -233943196 + L1 LINE L1 3623 3938 -2208 377 315 150 31 chr2 16745017 16745277 -233942577 - L2 LINE L2 0 3313 3023 235 273 65 42 chr2 16745321 16745537 -233942317 + L1 LINE L1 4342 4562 -1584 1833 174 14 20 chr2 16745554 16745898 -233941956 + MER61A LTR ERV1 2 343 0 266 343 27 20 chr2 16745981 16746127 -233941727 - L2 LINE L2 -924 2390 2244 323 182 13 0 chr2 16748137 16748214 -233939640 + GA-rich Low_complexity Low_complexity 3 80 0 192 400 0 0 chr2 16748703 16748768 -233939086 - MIR SINE MIR -106 102 38 32 0 0 0 chr2 16748941 16748973 -233938881 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr2 16749227 16749253 -233938601 + AT_rich Low_complexity Low_complexity 1 26 0 1140 276 19 91 chr2 16749774 16750235 -233937619 + L1ME LINE L1 132 559 -5837 391 280 86 33 chr2 16750403 16750832 -233937022 + L1ME LINE L1 3597 4048 -2167 1137 176 30 29 chr2 16750855 16751267 -233936587 - MLT1D LTR MaLR 0 505 6 216 0 0 0 chr2 16751303 16751327 -233936527 + (TC)n Simple_repeat Simple_repeat 2 25 0 218 103 0 26 chr2 16751327 16751366 -233936488 + (TA)n Simple_repeat Simple_repeat 2 39 0 439 309 101 42 chr2 16751414 16751889 -233935965 + L1ME LINE L1 4168 4670 -1545 1922 152 3 0 chr2 16752177 16752473 -233935381 + AluSx SINE Alu 1 297 -15 27 0 0 0 chr2 16752734 16752761 -233935093 + AT_rich Low_complexity Low_complexity 1 27 0 315 257 30 10 chr2 16752921 16753022 -233934832 + L1MC5 LINE L1 7808 7910 -51 2356 90 3 0 chr2 16753680 16753980 -233933874 - AluSc SINE Alu -8 301 1 329 252 40 80 chr2 16754245 16754337 -233933517 + L1ME LINE L1 5333 5418 -2459 7493 31 2 0 chr2 16754337 16755425 -233932429 + L1PA3 LINE L1 5066 6155 0 329 252 40 80 chr2 16755425 16755483 -233932371 + L1ME LINE L1 5418 5477 -2400 265 269 23 8 chr2 16755702 16755832 -233932022 + L1ME LINE L1 5763 5894 -296 344 240 210 0 chr2 16756208 16756308 -233931546 - L2 LINE L2 -8 3305 3185 21 36 0 0 chr2 16756810 16756838 -233931016 + AT_rich Low_complexity Low_complexity 1 28 0 530 282 84 15 chr2 16757816 16758089 -233929765 - L1ME3A LINE L1 -104 6066 5775 1722 189 93 31 chr2 16758089 16758617 -233929237 - MLT2A2 LTR ERVL 0 554 1 9164 124 42 47 chr2 16758618 16760207 -233927647 + THE1B-int LTR MaLR 1 1580 0 2582 102 14 11 chr2 16760207 16760570 -233927284 + THE1B LTR MaLR 1 364 0 845 262 58 9 chr2 16760570 16761031 -233926823 - L1ME3A LINE L1 -391 5779 5266 1704 221 20 6 chr2 16761163 16761520 -233926334 + MLT1A2 LTR MaLR 2 363 -11 2421 225 19 21 chr2 16761531 16762157 -233925697 + MLT1A2-int LTR MaLR 1 625 -1110 1881 226 11 20 chr2 16762583 16763021 -233924833 + MLT1A2-int LTR MaLR 1302 1735 0 1321 191 55 76 chr2 16763021 16763403 -233924451 + MLT1A2 LTR MaLR 1 374 0 287 238 228 0 chr2 16763524 16763625 -233924229 - MER5C DNA MER1_type -200 124 1 1029 184 35 4 chr2 16763679 16763935 -233923919 - Charlie5 DNA MER1_type -87 2525 2262 280 158 26 66 chr2 16763943 16764019 -233923835 - Charlie5 DNA MER1_type -2513 99 27 719 138 0 21 chr2 16764020 16764165 -233923689 + L1P LINE L1 4600 4741 -1405 222 345 34 14 chr2 16764665 16764813 -233923041 + MIR SINE MIR 99 249 -13 2082 146 3 0 chr2 16766041 16766350 -233921504 - AluSg SINE Alu 0 310 1 2570 119 3 11 chr2 16766672 16767049 -233920805 + THE1C LTR MaLR 2 375 0 9454 136 24 31 chr2 16767049 16768641 -233919213 + THE1C-int LTR MaLR 1 1580 0 2156 93 10 13 chr2 16768641 16768952 -233918902 + THE1C LTR MaLR 1 310 -65 1158 171 4 80 chr2 16768945 16769220 -233918634 - MER7A DNA MER2_type -94 252 1 * 236 294 28 28 chr2 16769220 16769329 -233918525 - MIR SINE MIR -2 260 152 348 301 187 0 chr2 16769337 16769460 -233918394 - MER5A DNA MER1_type -8 181 36 430 317 0 28 chr2 16769477 16769619 -233918235 - MIR SINE MIR -90 172 35 511 343 42 13 chr2 16770273 16770512 -233917342 - MIR SINE MIR -5 257 12 2249 100 10 3 chr2 16771354 16771654 -233916200 - AluSq SINE Alu -11 302 1 21 0 0 0 chr2 16771946 16771967 -233915887 + AT_rich Low_complexity Low_complexity 1 21 0 234 378 36 69 chr2 16772924 16773493 -233914361 + L2 LINE L2 2660 3271 -1 215 186 23 0 chr2 16774578 16774621 -233913233 + A-rich Low_complexity Low_complexity 3 46 0 24 67 0 0 chr2 16774741 16774786 -233913068 + AT_rich Low_complexity Low_complexity 1 45 0 1915 149 48 107 chr2 16774957 16775453 -233912401 + MLT1C LTR MaLR 1 467 0 5682 149 21 12 chr2 16775453 16776480 -233911374 - Tigger1 DNA MER2_type -2 2416 1380 1084 128 55 66 chr2 16776470 16776512 -233911342 - Tigger1 DNA MER2_type -2164 254 213 * 1567 189 50 4 chr2 16776512 16776816 -233911038 + AluJb SINE Alu 1 317 0 1084 128 55 66 chr2 16776816 16777028 -233910826 - Tigger1 DNA MER2_type -2205 213 1 641 239 19 19 chr2 16777439 16777502 -233910352 - MER20 DNA MER1_type 0 219 157 549 0 0 0 chr2 16777502 16777563 -233910291 + (CA)n Simple_repeat Simple_repeat 1 61 0 641 239 19 19 chr2 16777563 16777658 -233910196 - MER20 DNA MER1_type -61 158 61 1438 184 125 33 chr2 16777947 16778468 -233909386 - MLT2A2 LTR ERVL 0 554 1 346 272 144 17 chr2 16780243 16780416 -233907438 - MIR SINE MIR -60 202 8 202 351 11 21 chr2 16780564 16780658 -233907196 - MIR SINE MIR -156 106 14 1374 179 120 99 chr2 16780722 16781117 -233906737 + MLT2B1 LTR ERVL 1 409 -111 2264 100 7 0 chr2 16781117 16781408 -233906446 + AluSp SINE Alu 1 293 -20 1374 179 120 99 chr2 16781408 16781487 -233906367 + MLT2B1 LTR ERVL 409 485 -35 2519 137 11 48 chr2 16781597 16782036 -233905818 + MSTB LTR MaLR 4 426 0 288 0 0 0 chr2 16782057 16782089 -233905765 + (CA)n Simple_repeat Simple_repeat 1 32 0 3471 248 58 72 chr2 16782736 16785213 -233902641 - L1ME1 LINE L1 -3 6163 3730 1449 59 5 0 chr2 16785213 16785400 -233902454 - L1PA5 LINE L1 0 6154 5967 3471 248 58 72 chr2 16785400 16785916 -233901938 - L1ME1 LINE L1 -2436 3730 3208 1563 127 17 4 chr2 16785932 16786168 -233901686 - AluSx SINE Alu -12 300 62 300 213 43 0 chr2 16786168 16786252 -233901602 - L1M4 LINE L1 -1416 4730 4640 533 114 0 0 chr2 16786255 16786334 -233901520 - AluSx SINE Alu -233 79 1 728 319 16 40 chr2 16786524 16786775 -233901079 + MIR SINE MIR 16 260 -2 213 94 0 0 chr2 16786986 16787018 -233900836 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1973 129 7 0 chr2 16787022 16787301 -233900553 - AluSx SINE Alu -31 281 1 2370 268 107 24 chr2 16789089 16789409 -233898445 - L2 LINE L2 -26 3287 2995 1675 184 33 6 chr2 16789409 16789746 -233898108 + L1PA16 LINE L1 5821 6166 0 2370 268 107 24 chr2 16789746 16790486 -233897368 - L2 LINE L2 -318 2995 2151 421 181 101 14 chr2 16790548 16790686 -233897168 - MER5C DNA MER1_type -48 276 127 1195 106 35 26 chr2 16791218 16791445 -233896409 - L1MA9 LINE L1 0 6312 6084 479 227 8 34 chr2 16791681 16791800 -233896054 - MER5C DNA MER1_type -196 128 13 452 270 203 22 chr2 16791899 16792121 -233895733 - L2 LINE L2 -1162 2152 1891 195 42 0 0 chr2 16792574 16792598 -233895256 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2277 115 0 3 chr2 16792605 16792961 -233894893 - AluSx SINE Alu 0 355 1 209 319 125 0 chr2 16795055 16795127 -233892727 - L2 LINE L2 -5 3267 3187 544 309 126 50 chr2 16795885 16796490 -233891364 - L2 LINE L2 -440 2874 2224 25 0 0 0 chr2 16797650 16797675 -233890179 + AT_rich Low_complexity Low_complexity 1 25 0 787 135 11 34 chr2 16798282 16798460 -233889394 - L1MA8 LINE L1 0 6291 6118 1737 223 6 11 chr2 16799438 16799801 -233888053 - MLT1A1 LTR MaLR -2 363 3 362 296 72 0 chr2 16800128 16800253 -233887601 + L2 LINE L2 3180 3313 0 633 324 28 47 chr2 16800773 16801026 -233886828 - MIR SINE MIR 0 262 15 380 254 192 6 chr2 16801945 16802122 -233885732 - L1MC5 LINE L1 -728 7233 7024 279 265 60 0 chr2 16802932 16803015 -233884839 + MIR SINE MIR 123 210 -52 298 175 32 0 chr2 16803736 16803799 -233884055 - MER94 DNA DNA -45 89 25 396 167 0 0 chr2 16804443 16804515 -233883339 + (CA)n Simple_repeat Simple_repeat 1 72 0 613 295 5 36 chr2 16804800 16804993 -233882861 + MER20 DNA MER1_type 28 214 -5 333 329 68 81 chr2 16805398 16805967 -233881887 + L1MC4a LINE L1 6119 6680 -1128 353 286 48 5 chr2 16806199 16806388 -233881466 + L1M4 LINE L1 2320 2516 -3630 1889 253 52 11 chr2 16806538 16807254 -233880600 - L1M4 LINE L1 -1857 4289 3545 319 274 0 0 chr2 16807292 16807387 -233880467 - L1M4 LINE L1 -2740 3406 3312 207 0 0 0 chr2 16807731 16807754 -233880100 + (TAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr2 16808390 16808411 -233879443 + AT_rich Low_complexity Low_complexity 1 21 0 245 220 34 0 chr2 16808430 16808489 -233879365 - L1ME LINE L1 -280 5841 5781 1645 96 42 27 chr2 16810596 16810857 -233876997 + AluY SINE Alu 36 300 -11 473 369 5 0 chr2 16810952 16811139 -233876715 + MIR SINE MIR 65 252 -10 826 145 24 92 chr2 16811497 16811704 -233876150 - 7SK RNA RNA 0 193 1 3471 123 63 22 chr2 16811808 16812395 -233875459 - LTR36 LTR ERV1 0 611 1 421 343 45 0 chr2 16813151 16813329 -233874525 + MIR SINE MIR 23 208 -54 318 243 0 0 chr2 16813371 16813441 -233874413 + MIR SINE MIR 81 150 -112 284 333 36 30 chr2 16813937 16814102 -233873752 + L2 LINE L2 2208 2373 -941 381 282 19 45 chr2 16814425 16814603 -233873251 + MIR SINE MIR 42 208 -54 569 326 84 45 chr2 16814671 16815230 -233872624 + L2 LINE L2 1465 2045 -1269 256 185 46 0 chr2 16815886 16815951 -233871903 - L1ME1 LINE L1 -7 6954 6887 1466 230 21 12 chr2 16816003 16816338 -233871516 - L1ME1 LINE L1 -79 6882 6545 1148 248 25 89 chr2 16816357 16816874 -233870980 + MLT1D LTR MaLR 22 505 0 1118 241 136 50 chr2 16816874 16817331 -233870523 - L1ME1 LINE L1 -410 6551 6056 1417 220 46 76 chr2 16817333 16817910 -233869944 - MLT1E3 LTR MaLR -2 622 1 1358 228 21 75 chr2 16817910 16818379 -233869475 - L1ME1 LINE L1 -881 6060 5617 300 252 84 7 chr2 16818374 16818517 -233869337 + L1M4 LINE L1 2836 2989 -3157 * 1745 32 0 0 chr2 16818586 16818802 -233869052 - L1PA4 LINE L1 -914 5232 5017 7018 34 19 35 chr2 16818802 16819747 -233868107 + L1PA4 LINE L1 5223 6152 -3 2929 272 76 26 chr2 16819794 16821206 -233866648 + L1M4 LINE L1 3073 4554 -1592 300 250 42 0 chr2 16821203 16821299 -233866555 - L1ME1 LINE L1 -3663 3278 3179 * 1317 276 64 29 chr2 16821403 16822032 -233865822 + MER49 LTR ERV1 94 923 0 1097 282 65 45 chr2 16822033 16822215 -233865639 - L1ME1 LINE L1 -4136 2986 2809 2526 71 0 3 chr2 16822215 16822524 -233865330 - AluY SINE Alu -3 308 1 1097 282 65 45 chr2 16822524 16823100 -233864754 - L1ME1 LINE L1 -4313 2809 2213 381 186 24 0 chr2 16823102 16823226 -233864628 + (TA)n Simple_repeat Simple_repeat 1 127 0 1213 241 47 39 chr2 16823260 16824025 -233863829 - L1ME1 LINE L1 -4891 1532 1218 388 297 113 21 chr2 16824112 16824439 -233863415 - L1ME1 LINE L1 -6056 367 11 27 49 0 0 chr2 16825512 16825553 -233862301 + AT_rich Low_complexity Low_complexity 1 41 0 236 169 15 46 chr2 16826067 16826132 -233861722 - HAL1b LINE L1 -535 813 751 1931 151 3 0 chr2 16826854 16827165 -233860689 + AluSx SINE Alu 1 312 0 941 193 22 37 chr2 16827417 16827793 -233860061 - MER4C LTR ERV1 0 695 149 646 152 12 109 chr2 16827868 16827948 -233859906 - MER4C LTR ERV1 -316 149 92 202 28 28 28 chr2 16827948 16827984 -233859870 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 646 152 12 109 chr2 16827984 16828068 -233859786 - MER4C LTR ERV1 -373 92 1 576 246 80 6 chr2 16828297 16828472 -233859382 + L1MCa LINE L1 7 194 -6232 758 187 97 87 chr2 16828472 16828782 -233859072 - LTR48 LTR ERV1 0 787 475 2486 138 44 50 chr2 16828915 16829415 -233858439 + L1MC2 LINE L1 5833 6329 -15 2853 254 107 44 chr2 16829541 16831729 -233856125 + L1M4 LINE L1 2262 4619 -1527 1455 141 52 19 chr2 16831743 16832013 -233855841 - Tigger7 DNA MER2_type -1 2486 2208 370 250 12 0 chr2 16832016 16832096 -233855758 - Tigger7 DNA MER2_type -380 170 90 2563 126 40 75 chr2 16832102 16832449 -233855405 - L1PA16 LINE L1 -9 6157 5830 426 39 0 0 chr2 16832449 16832501 -233855353 + (TG)n Simple_repeat Simple_repeat 2 53 0 2563 126 40 75 chr2 16832501 16832647 -233855207 - L1PA16 LINE L1 -336 5830 5681 815 214 21 31 chr2 16832652 16832844 -233855010 + L1P LINE L1 4833 5022 -1124 582 162 9 9 chr2 16832845 16832950 -233854904 - Tigger7 DNA MER2_type -2374 113 9 1247 271 40 4 chr2 16832961 16833414 -233854440 + L1M4 LINE L1 4639 5107 -1039 299 294 50 25 chr2 16833601 16833720 -233854134 - L2 LINE L2 0 3313 3192 2093 93 20 3 chr2 16835320 16835620 -233852234 - AluSq SINE Alu -8 305 1 310 316 115 0 chr2 16837046 16837185 -233850669 - MIR SINE MIR -6 256 102 401 382 51 0 chr2 16837576 16837754 -233850100 - L2 LINE L2 0 3272 3086 231 181 24 24 chr2 16839074 16839157 -233848697 + (TATATG)n Simple_repeat Simple_repeat 4 86 0 2270 104 0 0 chr2 16839835 16840134 -233847720 - AluSx SINE Alu -13 299 1 3130 112 73 20 chr2 16840331 16840821 -233847033 - MER1A DNA MER1_type -13 516 1 27 62 0 0 chr2 16840949 16840997 -233846857 + AT_rich Low_complexity Low_complexity 1 48 0 269 253 0 13 chr2 16841046 16841121 -233846733 + (TG)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr2 16841143 16841171 -233846683 + AT_rich Low_complexity Low_complexity 1 28 0 7152 49 5 2 chr2 16841191 16842174 -233845680 + L1PA5 LINE L1 5163 6148 -6 285 314 95 0 chr2 16842422 16842527 -233845327 + MIR SINE MIR 128 242 -20 2263 82 0 0 chr2 16842677 16842970 -233844884 + AluY SINE Alu 2 294 -17 1966 131 3 14 chr2 16843851 16843981 -233843873 + AluSx SINE Alu 1 131 -181 423 0 0 0 chr2 16843981 16844028 -233843826 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 1966 131 3 14 chr2 16844028 16844188 -233843666 + AluSx SINE Alu 131 288 -24 223 323 108 0 chr2 16844458 16844551 -233843303 + L2 LINE L2 3170 3272 0 385 313 21 28 chr2 16844599 16844743 -233843111 - MIR3 SINE MIR 0 208 66 203 350 50 12 chr2 16845018 16845098 -233842756 - MIR SINE MIR -109 99 17 2371 80 7 0 chr2 16845142 16845443 -233842411 + AluSc SINE Alu 1 303 -6 282 292 92 17 chr2 16845597 16845717 -233842137 - L2 LINE L2 -1 3312 3184 554 304 70 10 chr2 16850441 16850642 -233837212 - MIR SINE MIR -41 221 9 274 250 125 25 chr2 16850958 16851038 -233836816 + L2 LINE L2 3185 3272 0 23 0 0 0 chr2 16851411 16851434 -233836420 + AT_rich Low_complexity Low_complexity 1 23 0 399 336 93 22 chr2 16851932 16852158 -233835696 - MIR SINE MIR -2 260 19 1848 221 100 18 chr2 16852632 16853294 -233834560 - L1M4 LINE L1 -2896 3250 2535 755 219 6 0 chr2 16853303 16853472 -233834382 - L1MB7 LINE L1 -19 6165 5996 5773 55 25 1 chr2 16853821 16854555 -233833299 - L1PA7 LINE L1 -3 6151 5401 355 318 121 20 chr2 16855064 16855262 -233832592 - L3b LINE CR1 -227 1356 1139 185 356 58 0 chr2 16855359 16855446 -233832408 - MIR SINE MIR -122 140 49 700 207 29 23 chr2 16855446 16855620 -233832234 + MER5B DNA MER1_type 4 178 0 3678 164 17 5 chr2 16855626 16856286 -233831568 + L1PA13 LINE L1 4486 5153 -993 4967 125 6 31 chr2 16856317 16857151 -233830703 + L1PA13 LINE L1 5347 6159 -4 402 238 158 67 chr2 16857166 16857330 -233830524 - MER5A DNA MER1_type -1 188 10 679 297 8 1 chr2 16857349 16857526 -233830328 + MER5B DNA MER1_type 1 189 0 387 355 20 0 chr2 16857741 16857893 -233829961 + L3 LINE CR1 1255 1409 -168 870 289 76 65 chr2 16857966 16858664 -233829190 + L2 LINE L2 2457 3172 -141 522 279 8 0 chr2 16858653 16858775 -233829079 - L2 LINE L2 0 3313 3191 * 290 278 42 68 chr2 16858779 16858939 -233828915 + L2 LINE L2 3128 3309 0 27 0 0 0 chr2 16858939 16858966 -233828888 + AT_rich Low_complexity Low_complexity 1 27 0 584 233 92 18 chr2 16859098 16859200 -233828654 + MER5A DNA MER1_type 10 130 -59 998 179 0 18 chr2 16859200 16859368 -233828486 - FAM SINE Alu -9 166 2 584 233 92 18 chr2 16859368 16859428 -233828426 + MER5A DNA MER1_type 130 184 -5 208 246 46 0 chr2 16859435 16859500 -233828354 - MIR3 SINE MIR -51 157 90 404 305 73 13 chr2 16860525 16860676 -233827178 + MIR SINE MIR 12 171 -91 205 284 90 0 chr2 16861182 16861249 -233826605 + MER5B DNA MER1_type 86 158 -20 583 340 47 13 chr2 16861799 16862034 -233825820 - MIR SINE MIR 0 262 20 201 229 0 0 chr2 16862306 16862354 -233825500 + CT-rich Low_complexity Low_complexity 4 51 0 334 353 191 13 chr2 16862436 16862739 -233825115 + L2 LINE L2 2897 3253 -19 2172 162 45 38 chr2 16863773 16864198 -233823656 - MSTA LTR MaLR 0 428 1 337 339 48 58 chr2 16864203 16864392 -233823462 + L2 LINE L2 3125 3311 -2 216 77 51 51 chr2 16864415 16864454 -233823400 - MIR SINE MIR -106 156 118 186 369 0 0 chr2 16865204 16865269 -233822585 - L2 LINE L2 -62 3210 3146 214 322 0 0 chr2 16865913 16865972 -233821882 - L2 LINE L2 -51 3221 3163 484 321 71 19 chr2 16866168 16866380 -233821474 - MIR SINE MIR -28 234 12 664 200 36 6 chr2 16867656 16867821 -233820033 + L1ME3 LINE L1 5786 5955 -207 204 263 145 0 chr2 16867912 16867988 -233819866 + L2 LINE L2 2935 3021 -251 2451 71 0 0 chr2 16868170 16868466 -233819388 - AluY SINE Alu -15 296 1 221 333 83 0 chr2 16869351 16869447 -233818407 + MIR SINE MIR 51 133 -75 449 312 91 74 chr2 16870193 16870546 -233817308 - L2 LINE L2 0 3272 2914 4607 181 25 22 chr2 16871437 16872408 -233815446 + L1MA9 LINE L1 5339 6312 0 1155 273 52 9 chr2 16873096 16873594 -233814260 + MER69 DNA AcHobo 8 568 -658 745 236 239 14 chr2 16873582 16874009 -233813845 + MER69 DNA AcHobo 2000 2522 -4 * 200 301 12 36 chr2 16875235 16875318 -233812536 + MIR SINE MIR 54 134 -74 448 201 65 26 chr2 16875472 16875626 -233812228 - MER103 DNA DNA -4 162 3 438 88 0 0 chr2 16876311 16876379 -233811475 + (TGGA)n Simple_repeat Simple_repeat 2 69 0 191 284 30 0 chr2 16876599 16876666 -233811188 - L2 LINE L2 -73 3240 3172 300 363 79 46 chr2 16877366 16877735 -233810119 - L2 LINE L2 -663 2651 2271 260 324 19 0 chr2 16877829 16877934 -233809920 - MIR SINE MIR -10 252 146 651 270 157 22 chr2 16877941 16878171 -233809683 + MIR SINE MIR 2 262 0 260 291 10 29 chr2 16878151 16878254 -233809600 - MIR SINE MIR -93 169 69 * 233 386 26 33 chr2 16879445 16879598 -233808256 + MIR3 SINE MIR 52 203 -5 251 0 59 0 chr2 16880174 16880208 -233807646 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2238 109 0 0 chr2 16880289 16880591 -233807263 + AluSx SINE Alu 3 304 -8 190 256 0 0 chr2 16880761 16880804 -233807050 + L2 LINE L2 3262 3304 -9 2800 143 86 46 chr2 16881731 16882429 -233805425 + pTR5 LTR ERV1 741 1466 -972 4160 112 108 101 chr2 16882851 16884238 -233803616 + pTR5 LTR ERV1 66 2438 0 306 339 188 14 chr2 16884475 16884805 -233803049 + L2 LINE L2 2716 3090 -182 21 57 0 0 chr2 16885841 16885876 -233801978 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr2 16886976 16887013 -233800841 + AT_rich Low_complexity Low_complexity 1 37 0 195 364 64 69 chr2 16889519 16889956 -233797898 - L2 LINE L2 -14 3258 2824 546 153 14 10 chr2 16889998 16890291 -233797563 + (TA)n Simple_repeat Simple_repeat 1 294 0 343 37 19 19 chr2 16891758 16891812 -233796042 + (TG)n Simple_repeat Simple_repeat 2 55 0 316 183 19 77 chr2 16891815 16891919 -233795935 - LTR50 LTR ERVL -3 792 695 445 211 46 11 chr2 16892187 16892296 -233795558 - MLT1E1 LTR MaLR -128 509 347 345 246 140 9 chr2 16892326 16892440 -233795414 - MLT1E1 LTR MaLR -349 277 149 1856 194 7 65 chr2 16892548 16892966 -233794888 - MSTD LTR MaLR -2 394 1 908 205 82 61 chr2 16893582 16893875 -233793979 + MLT1E2 LTR MaLR 1 299 -327 652 243 24 12 chr2 16893897 16894066 -233793788 + MLT1E2 LTR MaLR 402 572 -52 1532 121 8 4 chr2 16894066 16894315 -233793539 - L1PA6 LINE L1 0 6154 5905 5241 48 3 12 chr2 16894419 16895426 -233792428 - L1PA6 LINE L1 -245 5909 4912 254 173 0 120 chr2 16895428 16895503 -233792351 + MLT1E2 LTR MaLR 559 624 0 219 88 0 0 chr2 16895640 16895674 -233792180 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 290 359 23 16 chr2 16896605 16896733 -233791121 + MIR SINE MIR 12 140 -122 280 303 22 34 chr2 16897038 16897127 -233790727 + L2 LINE L2 3185 3272 0 528 239 50 70 chr2 16897718 16897919 -233789935 - MLT1D LTR MaLR -286 219 23 2394 251 45 20 chr2 16897957 16898761 -233789093 + L1ME3A LINE L1 3611 4434 -1712 11903 200 45 20 chr2 16898800 16899567 -233788287 - L1MA9 LINE L1 -256 7077 6330 198 0 0 0 chr2 16899567 16899589 -233788265 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 11903 200 45 20 chr2 16899589 16899818 -233788036 - L1MA9 LINE L1 -1003 6330 6108 2583 40 0 0 chr2 16899818 16900117 -233787737 + AluY SINE Alu 1 299 -12 11903 200 45 20 chr2 16900117 16902835 -233785019 - L1MA9 LINE L1 -1225 6108 3275 1857 222 78 50 chr2 16902828 16903157 -233784697 - L1MA9 LINE L1 -4517 2581 2262 * 1748 185 13 0 chr2 16903157 16903459 -233784395 - AluJb SINE Alu -6 306 1 1857 222 78 50 chr2 16903459 16903482 -233784372 - L1MA9 LINE L1 -4836 2262 2241 2191 102 10 3 chr2 16903482 16903776 -233784078 - AluSg SINE Alu -14 296 1 1857 222 78 50 chr2 16903776 16904051 -233783803 - L1MA9 LINE L1 -4857 2241 1975 261 0 0 0 chr2 16904051 16904080 -233783774 + (TG)n Simple_repeat Simple_repeat 2 30 0 1857 222 78 50 chr2 16904080 16904385 -233783469 - L1MA9 LINE L1 -5123 1975 1675 300 264 55 142 chr2 16904505 16904816 -233783038 - L1MA9 LINE L1 -5552 1616 1333 238 349 6 40 chr2 16905021 16905196 -233782658 - L1MA9 LINE L1 -5967 1131 963 1761 221 18 37 chr2 16905204 16905715 -233782139 + L1ME3A LINE L1 4862 5362 -784 2014 268 25 2 chr2 16905716 16906287 -233781567 + L1ME1 LINE L1 5578 6161 -5 260 70 23 0 chr2 16906444 16906487 -233781367 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 687 148 35 0 chr2 16906487 16906602 -233781252 - AluSp/q SINE Alu -32 281 163 1420 131 4 48 chr2 16906604 16906833 -233781021 - AluSp SINE Alu -94 219 1 1381 287 123 21 chr2 16906871 16907614 -233780240 + L1ME3A LINE L1 5347 6164 -6 24 53 0 0 chr2 16908148 16908186 -233779668 + AT_rich Low_complexity Low_complexity 1 38 0 330 295 84 0 chr2 16908692 16908787 -233779067 + L2 LINE L2 3208 3310 -3 184 268 18 0 chr2 16910231 16910287 -233777567 - MIR SINE MIR 0 262 206 1549 195 7 24 chr2 16910776 16911068 -233776786 + AluJo SINE Alu 1 287 -25 26 0 0 0 chr2 16911070 16911096 -233776758 + AT_rich Low_complexity Low_complexity 1 26 0 187 279 23 0 chr2 16912277 16912320 -233775534 + L2 LINE L2 3210 3253 -19 205 279 114 57 chr2 16912563 16912721 -233775133 - MIR3 SINE MIR -6 202 36 30 0 0 0 chr2 16913418 16913448 -233774406 + AT_rich Low_complexity Low_complexity 1 30 0 2972 97 4 21 chr2 16913449 16913914 -233773940 - L1MA3 LINE L1 -1 6304 5848 252 0 0 0 chr2 16914454 16914482 -233773372 + (A)n Simple_repeat Simple_repeat 1 28 0 279 0 0 0 chr2 16915088 16915119 -233772735 + (GA)n Simple_repeat Simple_repeat 2 32 0 1606 170 12 87 chr2 16915849 16916184 -233771670 + AluJb SINE Alu 1 310 -2 269 260 0 10 chr2 16916211 16916311 -233771543 + GA-rich Low_complexity Low_complexity 1 99 0 414 294 77 28 chr2 16917557 16917635 -233770219 + MLT1I LTR MaLR 63 136 -273 2519 118 37 55 chr2 16917635 16918069 -233769785 - MSTA LTR MaLR -2 426 1 414 294 77 28 chr2 16918069 16918238 -233769616 + MLT1I LTR MaLR 136 322 -87 2091 137 23 3 chr2 16918246 16918552 -233769302 - AluSx SINE Alu 0 312 1 302 342 27 27 chr2 16919227 16919338 -233768516 + L2 LINE L2 3162 3272 0 310 306 136 14 chr2 16920009 16920156 -233767698 + MIR SINE MIR 36 200 -62 2285 119 26 98 chr2 16921371 16921832 -233766022 + MSTA LTR MaLR 1 428 0 280 258 55 9 chr2 16921925 16922034 -233765820 + MIR SINE MIR 37 155 -66 4896 117 24 10 chr2 16922458 16923267 -233764587 + L1PA15 LINE L1 5346 6165 0 329 209 93 71 chr2 16923273 16923455 -233764399 + L1M4 LINE L1 4614 4799 -1347 447 276 30 15 chr2 16924882 16925016 -233762838 + MIR SINE MIR 126 261 -1 21 0 0 0 chr2 16925055 16925076 -233762778 + AT_rich Low_complexity Low_complexity 1 21 0 601 285 150 74 chr2 16925944 16927315 -233760539 + L1MDa LINE L1 897 2254 -841 756 231 12 0 chr2 16927472 16927645 -233760209 + LTR55 LTR ERV 4 178 -370 2064 192 50 8 chr2 16927725 16928240 -233759614 - L1 LINE L1 -1855 4291 3755 343 357 64 11 chr2 16928870 16929136 -233758718 + L1ME LINE L1 4722 5001 -1145 54 62 0 0 chr2 16929272 16929368 -233758486 + AT_rich Low_complexity Low_complexity 1 96 0 265 284 131 17 chr2 16929390 16929626 -233758228 + L1ME LINE L1 5542 5804 -317 2353 70 10 16 chr2 16929840 16930153 -233757701 - AluYa5 SINE Alu 0 311 1 472 208 47 9 chr2 16930526 16930632 -233757222 - MER81 DNA DNA -2 112 3 384 259 103 14 chr2 16931066 16931223 -233756631 - MIR SINE MIR -54 208 41 22 0 0 0 chr2 16931484 16931506 -233756348 + AT_rich Low_complexity Low_complexity 1 22 0 191 362 0 0 chr2 16932060 16932118 -233755736 - L2 LINE L2 -220 3052 2995 306 0 0 0 chr2 16933685 16933719 -233754135 + (A)n Simple_repeat Simple_repeat 1 34 0 279 0 0 0 chr2 16934324 16934355 -233753499 + (GA)n Simple_repeat Simple_repeat 2 32 0 342 127 32 0 chr2 16935300 16935363 -233752491 + MER53 DNA DNA 124 188 -1 311 318 47 0 chr2 16935628 16935757 -233752097 + MIR SINE MIR 64 198 -64 187 277 0 46 chr2 16935833 16935898 -233751956 + L2 LINE L2 3252 3313 0 2225 120 0 7 chr2 16936184 16936492 -233751362 + AluSq SINE Alu 1 306 -7 223 234 32 117 chr2 16936594 16936688 -233751166 + L2 LINE L2 3226 3311 -2 231 209 0 0 chr2 16936691 16936734 -233751120 - MIR SINE MIR 0 262 220 507 292 81 89 chr2 16936741 16937286 -233750568 + L2 LINE L2 2738 3272 0 276 327 161 47 chr2 16939160 16939564 -233748290 + L2 LINE L2 2336 2785 -529 372 71 0 0 chr2 16940134 16940190 -233747664 + (TC)n Simple_repeat Simple_repeat 2 57 0 258 56 0 0 chr2 16940190 16940226 -233747628 + (CA)n Simple_repeat Simple_repeat 1 36 0 201 290 16 16 chr2 16941177 16941239 -233746615 - MIR SINE MIR -5 257 196 465 133 0 0 chr2 16941241 16941316 -233746538 + (CA)n Simple_repeat Simple_repeat 2 76 0 328 319 0 0 chr2 16941329 16941423 -233746431 - MIR SINE MIR -73 189 96 363 347 102 27 chr2 16941980 16942429 -233745425 + L2 LINE L2 1491 1973 -1341 258 294 0 0 chr2 16942504 16942572 -233745282 - L2 LINE L2 -1 3312 3245 2065 120 7 7 chr2 16942754 16943053 -233744801 - AluSx SINE Alu -13 299 1 538 143 11 0 chr2 16943229 16943320 -233744534 + L1PB1 LINE L1 5691 5782 -369 2485 117 5 3 chr2 16944351 16944728 -233743126 + L1PB1 LINE L1 5769 6146 -5 442 329 41 62 chr2 16944807 16945302 -233742552 - L2 LINE L2 -226 3046 2555 189 0 0 0 chr2 16946229 16946250 -233741604 + (TTA)n Simple_repeat Simple_repeat 1 21 0 881 159 29 58 chr2 16947872 16948080 -233739774 + MLT1A1 LTR MaLR 1 202 -163 393 233 117 0 chr2 16948105 16948208 -233739646 - MER45 DNA AcHobo -61 117 3 228 326 28 85 chr2 16948344 16948485 -233739369 + MIR3 SINE MIR 3 135 -73 216 333 12 12 chr2 16948477 16948561 -233739293 + MER5A DNA MER1_type 85 168 -21 * 237 250 18 0 chr2 16948510 16948566 -233739288 - MER5B DNA MER1_type -105 73 17 3952 145 38 16 chr2 16949080 16949810 -233738044 - L1MC1 LINE L1 0 6333 5588 618 294 42 32 chr2 16949834 16950413 -233737441 - L1ME LINE L1 -358 5804 5218 351 282 125 32 chr2 16950446 16950694 -233737160 - L1ME LINE L1 -1119 5027 4757 946 152 28 128 chr2 16950751 16951001 -233736853 - L1MC1 LINE L1 -87 6246 6022 358 244 12 0 chr2 16951003 16951089 -233736765 + Charlie5 DNA MER1_type 15 101 -2511 833 267 96 81 chr2 16951263 16951941 -233735913 - L1ME LINE L1 -2749 3397 2710 2653 99 7 24 chr2 16952033 16952458 -233735396 - MER11C LTR ERVK 0 1071 654 1540 202 67 21 chr2 16952570 16952946 -233734908 - MER52A LTR ERV1 -1362 393 1 238 255 20 10 chr2 16953967 16954069 -233733785 + L1MEc LINE L1 829 931 -5465 24 0 0 0 chr2 16954301 16954325 -233733529 + AT_rich Low_complexity Low_complexity 1 24 0 416 305 138 34 chr2 16954963 16955232 -233732622 - MLT1J1 LTR MaLR -23 423 127 643 162 0 0 chr2 16955658 16955763 -233732091 + AluSg/x SINE Alu 197 301 -11 247 209 174 0 chr2 16956096 16956211 -233731643 - L1ME LINE L1 -220 5901 5767 244 235 0 44 chr2 16956263 16956331 -233731523 - MIR SINE MIR -67 195 131 852 286 11 34 chr2 16958418 16958680 -233729174 + MIR SINE MIR 2 257 -5 270 347 27 48 chr2 16959080 16959227 -233728627 - MIR3 SINE MIR -7 201 58 2013 147 7 0 chr2 16959239 16959655 -233728199 + L1PA15 LINE L1 5392 5981 -184 441 310 28 0 chr2 16959719 16959864 -233727990 - L2 LINE L2 0 3313 3165 1292 153 0 5 chr2 16959915 16960124 -233727730 + L1PA15 LINE L1 5955 6162 -3 278 294 18 28 chr2 16961762 16961871 -233725983 + MIR SINE MIR 155 262 0 1437 296 120 27 chr2 16963453 16963600 -233724254 - L2 LINE L2 -10 3303 3171 2662 191 2 23 chr2 16963600 16964072 -233723782 - MER88 LTR ERVL 0 464 3 1437 296 120 27 chr2 16964072 16964839 -233723015 - L2 LINE L2 -142 3171 2302 286 298 128 46 chr2 16965184 16965402 -233722452 - L2 LINE L2 -58 3214 2979 239 292 108 15 chr2 16965917 16966047 -233721807 + L2 LINE L2 2851 2992 -280 2096 123 3 0 chr2 16966257 16966549 -233721305 + AluSq SINE Alu 17 309 -4 482 282 70 40 chr2 16967304 16967531 -233720323 - MIR SINE MIR -8 254 21 625 286 17 0 chr2 16968520 16968698 -233719156 - MIR SINE MIR -10 252 72 1535 114 5 9 chr2 16968703 16968922 -233718932 + MER30 DNA MER1_type 13 230 0 361 302 130 47 chr2 16968924 16969153 -233718701 - HAL1 LINE L1 -1148 1359 1098 735 226 0 0 chr2 16969153 16969268 -233718586 - FLAM_A SINE Alu -18 115 1 361 302 130 47 chr2 16969268 16969339 -233718515 - HAL1 LINE L1 -1409 1098 1034 219 171 0 0 chr2 16969650 16969685 -233718169 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 1834 187 15 80 chr2 16970369 16970780 -233717074 - MLT1B LTR MaLR -6 384 1 516 270 119 11 chr2 16970780 16970965 -233716889 - L2 LINE L2 -1008 2306 2102 188 143 0 0 chr2 16971481 16971509 -233716345 - L2 LINE L2 -5 3267 3240 236 315 41 14 chr2 16971711 16971784 -233716070 + L3b LINE CR1 1507 1581 -2 2117 112 10 3 chr2 16973425 16973721 -233714133 - AluSq SINE Alu -15 298 1 456 309 7 0 chr2 16974145 16974297 -233713557 - LTR16B LTR ERVL -303 161 9 216 328 124 48 chr2 16975195 16975509 -233712345 - L2 LINE L2 -23 3249 2912 523 256 88 37 chr2 16976015 16976100 -233711754 + L1M4 LINE L1 2944 3023 -3123 2015 126 28 0 chr2 16976100 16976385 -233711469 + AluSx SINE Alu 1 293 -19 523 256 88 37 chr2 16976385 16976572 -233711282 + L1M4 LINE L1 3023 3230 -2916 1073 270 76 5 chr2 16976634 16977042 -233710812 + L1M4 LINE L1 3364 3800 -2346 204 133 50 0 chr2 16977095 16977155 -233710699 + (TA)n Simple_repeat Simple_repeat 2 64 0 625 247 108 71 chr2 16977358 16977844 -233710010 + MLT1F LTR MaLR 44 538 -4 256 303 42 34 chr2 16978644 16978763 -233709091 + L2 LINE L2 3160 3279 -34 324 338 93 36 chr2 16978854 16978993 -233708861 + L2 LINE L2 3124 3270 -2 271 312 124 25 chr2 16979159 16979320 -233708534 - MIR SINE MIR -50 212 35 193 270 22 34 chr2 16979397 16979486 -233708368 + MIR SINE MIR 78 165 -97 58 87 0 0 chr2 16979501 16979650 -233708204 + AT_rich Low_complexity Low_complexity 1 149 0 388 323 55 0 chr2 16980566 16980693 -233707161 - MIR SINE MIR -109 153 20 258 322 59 0 chr2 16981055 16981173 -233706681 - MIR3 SINE MIR -26 182 58 491 210 0 10 chr2 16981213 16981313 -233706541 + MER94 DNA DNA 2 100 -34 739 259 44 35 chr2 16981380 16981608 -233706246 - MIR SINE MIR -21 241 12 195 250 132 0 chr2 16981766 16981842 -233706012 + MIR3 SINE MIR 98 183 -25 333 362 80 0 chr2 16982004 16982167 -233705687 - MIR SINE MIR -82 180 5 1652 195 0 16 chr2 16985966 16986273 -233701581 + AluJo SINE Alu 1 302 -10 2196 100 0 0 chr2 16986337 16986653 -233701201 - AluSg SINE Alu 0 316 1 495 251 82 41 chr2 16986974 16987145 -233700709 - MER5B DNA MER1_type 0 178 1 759 279 5 15 chr2 16988325 16988526 -233699328 + MER58A DNA MER1_type 1 199 -25 246 364 46 13 chr2 16989460 16989611 -233698243 + MIR SINE MIR 77 232 -30 2127 111 16 16 chr2 16989752 16990058 -233697796 - AluSp SINE Alu -7 306 1 869 235 98 125 chr2 16990142 16990712 -233697142 - MLT1H1 LTR MaLR 0 555 1 462 305 69 20 chr2 16991073 16991276 -233696578 - MIR SINE MIR -30 232 20 352 176 20 0 chr2 16992219 16992321 -233695533 + (CA)n Simple_repeat Simple_repeat 2 105 0 419 217 66 38 chr2 16992608 16992714 -233695140 - MER103 DNA DNA -53 113 5 300 235 154 22 chr2 16992953 16993089 -233694765 - MIR3 SINE MIR -21 187 34 2968 75 6 3 chr2 16993638 16993999 -233693855 - THE1B LTR MaLR 0 364 3 196 310 86 0 chr2 16995732 16995790 -233692064 - L3 LINE CR1 -12 1565 1503 674 235 12 53 chr2 16995809 16995979 -233691875 + MER45A DNA AcHobo 16 178 0 203 133 0 0 chr2 16996141 16996171 -233691683 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 531 243 107 6 chr2 16996600 16996769 -233691085 - MIR SINE MIR -2 260 75 507 357 38 13 chr2 16996856 16997091 -233690763 - L3 LINE CR1 -87 1490 1250 438 311 0 25 chr2 16997263 16997382 -233690472 - MIR SINE MIR -133 129 14 24 0 0 0 chr2 16997932 16997956 -233689898 + AT_rich Low_complexity Low_complexity 1 24 0 633 299 61 34 chr2 17001038 17001366 -233686488 - MLT1K LTR MaLR -8 580 244 1450 182 48 4 chr2 17001699 17001968 -233685886 + MLT2B1 LTR ERVL 1 281 -239 332 297 18 45 chr2 17002069 17002180 -233685674 - L3 LINE CR1 -840 737 630 742 170 57 19 chr2 17002214 17002373 -233685481 + MLT2B2 LTR ERVL 332 496 -19 206 265 33 26 chr2 17002551 17002702 -233685152 + (CACCC)n Simple_repeat Simple_repeat 5 156 0 272 246 55 82 chr2 17002917 17003027 -233684827 + L2 LINE L2 3203 3309 -4 346 358 128 20 chr2 17003033 17003477 -233684377 - L3 LINE CR1 -814 763 272 519 327 43 14 chr2 17003795 17004006 -233683848 - MIR SINE MIR 0 262 46 208 295 196 18 chr2 17004418 17004530 -233683324 + L2 LINE L2 3140 3271 -1 330 191 107 12 chr2 17005562 17005646 -233682208 - MER81 DNA DNA -3 111 20 324 168 76 0 chr2 17005996 17006127 -233681727 + (TA)n Simple_repeat Simple_repeat 1 141 0 646 338 100 30 chr2 17006441 17006963 -233680891 - L2 LINE L2 0 3313 2761 6161 177 47 29 chr2 17006978 17007699 -233680155 - L1MC3 LINE L1 -6 7779 7024 183 100 0 0 chr2 17007699 17007729 -233680125 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 6161 177 47 29 chr2 17007729 17008251 -233679603 - L1MC3 LINE L1 -761 7024 6513 294 36 455 0 chr2 17008300 17008355 -233679499 - MADE1 DNA Mariner 0 80 1 5033 222 16 9 chr2 17008377 17009473 -233678381 - L1MC3 LINE L1 -1238 6547 5445 555 315 79 21 chr2 17009699 17009978 -233677876 - MER102b DNA MER1_type 0 341 47 437 320 132 30 chr2 17010056 17010390 -233677464 - L2 LINE L2 -568 2746 2379 516 312 3 4 chr2 17010392 17010557 -233677297 - MIR SINE MIR -15 193 30 1932 176 90 9 chr2 17011612 17012044 -233675810 - MLT1C LTR MaLR 0 467 1 252 0 0 0 chr2 17012591 17012619 -233675235 + (TC)n Simple_repeat Simple_repeat 1 28 0 2107 159 63 0 chr2 17014012 17014363 -233673491 + MER83C LTR ERV1 1 373 0 267 302 108 23 chr2 17015037 17015166 -233672688 + MIR SINE MIR 2 141 -121 223 293 17 0 chr2 17015232 17015290 -233672564 + L2 LINE L2 3233 3291 -22 721 266 112 17 chr2 17015440 17015673 -233672181 + MIR SINE MIR 8 262 0 265 149 43 0 chr2 17015988 17016035 -233671819 - L2 LINE L2 0 3313 3265 1170 203 159 22 chr2 17017076 17017441 -233670413 - Tigger5 DNA MER2_type 0 2323 4 308 216 182 0 chr2 17017557 17017645 -233670209 + MER5A DNA MER1_type 83 186 -3 364 244 35 0 chr2 17017741 17017827 -233670027 - L2 LINE L2 -2044 1270 1182 556 159 10 3 chr2 17017827 17017946 -233669908 + MLT1D LTR MaLR 350 505 0 494 291 119 0 chr2 17017989 17018199 -233669655 + MLT1J2 LTR MaLR 198 432 -18 1648 158 31 58 chr2 17020101 17020482 -233667372 + MLT1B LTR MaLR 20 390 0 218 278 28 14 chr2 17020825 17020897 -233666957 + L2 LINE L2 3240 3312 -1 239 412 76 0 chr2 17020961 17021092 -233666762 - L2 LINE L2 -5 3267 3127 788 136 0 14 chr2 17071697 17071837 -233616017 + L1MA4 LINE L1 6159 6296 -4 180 293 147 13 chr2 17071997 17072072 -233615782 + L2 LINE L2 3187 3271 -1 197 333 106 0 chr2 17072205 17072346 -233615508 + L2 LINE L2 2898 3053 -219 6944 114 16 19 chr2 17073063 17074766 -233613088 - L1MA3 LINE L1 0 6305 4605 298 283 57 38 chr2 17074826 17074932 -233612922 - MIR3 SINE MIR -41 167 60 361 312 39 54 chr2 17076217 17076422 -233611432 - L2 LINE L2 0 3313 3112 190 254 79 16 chr2 17076574 17076637 -233611217 + L2 LINE L2 2969 3035 -237 999 70 0 0 chr2 17077631 17077760 -233610094 - L1PBa LINE L1 -6728 135 7 2714 23 0 0 chr2 17077760 17078064 -233609790 - AluYa5 SINE Alu -7 304 1 262 275 64 9 chr2 17078558 17078667 -233609187 - MIR SINE MIR -78 130 16 304 316 65 36 chr2 17079171 17079310 -233608544 + L2 LINE L2 3125 3267 -5 26 30 0 0 chr2 17079521 17079554 -233608300 + AT_rich Low_complexity Low_complexity 1 33 0 335 348 76 8 chr2 17080246 17080364 -233607490 - MIR SINE MIR -59 149 24 485 259 265 6 chr2 17081657 17081827 -233606027 - MIR SINE MIR -33 229 16 239 182 0 0 chr2 17081949 17081993 -233605861 + MIR SINE MIR 109 152 -110 455 305 93 43 chr2 17082089 17082391 -233605463 + HERVL LTR ERVL 2448 2764 -2890 258 288 68 0 chr2 17085190 17085263 -233602591 + MIR SINE MIR 46 123 -139 212 196 0 43 chr2 17086113 17086159 -233601695 - MIR SINE MIR 0 262 219 186 306 124 33 chr2 17086673 17086794 -233601060 - MIR SINE MIR -116 146 15 360 309 59 25 chr2 17088018 17088254 -233599600 + L1MC5 LINE L1 4360 4603 -1543 648 240 0 0 chr2 17088255 17088434 -233599420 + (TA)n Simple_repeat Simple_repeat 2 180 0 250 289 0 0 chr2 17088441 17088531 -233599323 - L1MC4 LINE L1 -1339 6703 6614 25 0 0 0 chr2 17088575 17088600 -233599254 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr2 17088622 17088644 -233599210 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2377 112 27 3 chr2 17088697 17089063 -233598791 + THE1C LTR MaLR 1 375 0 6991 182 128 62 chr2 17089063 17090536 -233597318 + THE1C-int LTR MaLR 1 1571 -9 2193 134 21 21 chr2 17090546 17090919 -233596935 + THE1C LTR MaLR 3 375 0 1324 191 0 0 chr2 17090922 17091174 -233596680 - L1 LINE L1 -1799 4347 4096 * 5889 162 7 4 chr2 17091166 17092867 -233594987 + L1PB1 LINE L1 4437 6146 -5 33 25 0 0 chr2 17092874 17092914 -233594940 + AT_rich Low_complexity Low_complexity 1 40 0 1707 99 63 0 chr2 17092914 17093200 -233594654 + L1PA14 LINE L1 5884 6185 0 1784 271 58 38 chr2 17093299 17094013 -233593841 + L1MC5 LINE L1 4762 5066 -1080 2207 99 7 13 chr2 17094013 17094316 -233593538 - AluSx SINE Alu -11 301 1 1784 271 58 38 chr2 17094316 17094662 -233593192 + L1MC5 LINE L1 5066 5403 -743 1089 245 82 68 chr2 17094940 17095515 -233592339 + L1MC5 LINE L1 6637 7219 -742 284 164 194 0 chr2 17095706 17095773 -233592081 + MER116 DNA Mariner 1 80 0 541 256 70 58 chr2 17095778 17096247 -233591607 + L1MC5 LINE L1 7357 7831 -130 1248 258 101 90 chr2 17097050 17097292 -233590562 + MLT1E LTR MaLR 1 239 -354 2820 148 6 48 chr2 17097292 17097787 -233590067 + MER101 LTR ERV1 1 474 0 1248 258 101 90 chr2 17097787 17098080 -233589774 + MLT1E LTR MaLR 239 542 -51 224 370 0 0 chr2 17098426 17098499 -233589355 - L2 LINE L2 0 3272 3200 234 136 0 0 chr2 17098733 17098777 -233589077 + (A)n Simple_repeat Simple_repeat 1 44 0 29 70 0 0 chr2 17099193 17099250 -233588604 + AT_rich Low_complexity Low_complexity 1 57 0 315 273 184 24 chr2 17099660 17100030 -233587824 - L1M4 LINE L1 -2535 3611 3183 4645 209 40 10 chr2 17100267 17100981 -233586873 - L1 LINE L1 -2546 3600 2836 2064 148 0 6 chr2 17100981 17101292 -233586562 - AluSq SINE Alu -4 309 1 4645 209 40 10 chr2 17101292 17101738 -233586116 - L1 LINE L1 -3310 2836 2405 8541 169 19 16 chr2 17101752 17104431 -233583423 + L1MA5A LINE L1 3595 6280 -17 249 302 112 39 chr2 17104461 17104792 -233583062 - L1M4 LINE L1 -3385 2761 2407 1888 152 19 45 chr2 17104884 17105258 -233582596 + THE1B LTR MaLR 1 364 0 11406 108 10 1 chr2 17105258 17106823 -233581031 + THE1B-int LTR MaLR 1 1579 -1 1881 152 16 51 chr2 17106825 17107200 -233580654 + THE1B LTR MaLR 3 364 0 272 256 60 15 chr2 17107201 17107334 -233580520 - L1M4 LINE L1 -3861 2285 2147 1524 193 0 40 chr2 17107616 17107938 -233579916 - AluJb SINE Alu -3 309 1 889 274 129 11 chr2 17107993 17108373 -233579481 + LTR16B LTR ERVL 38 462 -2 2256 116 48 22 chr2 17109644 17109999 -233577855 + THE1B LTR MaLR 1 364 0 334 302 88 25 chr2 17110154 17110313 -233577541 - L1M4 LINE L1 -786 5360 5192 189 308 13 26 chr2 17110434 17110512 -233577342 + MIR SINE MIR 30 106 -102 269 333 54 0 chr2 17110626 17110719 -233577135 - MIR SINE MIR -142 120 23 337 292 108 0 chr2 17111102 17111232 -233576622 - MIR SINE MIR -14 248 105 236 300 121 66 chr2 17112595 17112868 -233574986 + L2 LINE L2 2447 2734 -580 313 319 65 36 chr2 17112900 17113038 -233574816 + MER5A DNA MER1_type 1 142 -47 557 299 110 39 chr2 17113428 17113709 -233574145 + L1MEd LINE L1 425 725 -5394 1605 235 27 64 chr2 17113811 17114372 -233573482 + L1MC5 LINE L1 6695 7234 -727 848 228 97 20 chr2 17114392 17114732 -233573122 + L1MC5 LINE L1 7250 7524 -437 1402 182 119 62 chr2 17114732 17115101 -233572753 - MLT1B LTR MaLR 0 390 1 2160 187 24 22 chr2 17115115 17115532 -233572322 - MLT1B-int LTR MaLR -15 1356 939 388 253 21 0 chr2 17115548 17115643 -233572211 - MLT1B LTR MaLR -291 99 3 316 262 90 0 chr2 17115643 17115765 -233572089 + L1MC5 LINE L1 7516 7648 -313 5643 135 28 8 chr2 17115791 17116753 -233571101 + L1MA5 LINE L1 5316 6296 -4 557 224 88 18 chr2 17116774 17117002 -233570852 + L1MC5 LINE L1 7683 7926 -35 253 301 18 0 chr2 17117159 17117272 -233570582 + L1ME3A LINE L1 4537 4651 -1495 282 143 0 0 chr2 17117333 17117382 -233570472 + (GAA)n Simple_repeat Simple_repeat 2 50 0 424 313 107 8 chr2 17117398 17117660 -233570194 + L1ME3A LINE L1 4712 4999 -1147 5880 318 82 14 chr2 17117770 17119251 -233568603 + L2 LINE L2 92 1790 -1524 180 0 0 0 chr2 17119251 17119271 -233568583 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5880 318 82 14 chr2 17119271 17120110 -233567744 + L2 LINE L2 1790 2570 -744 1609 218 56 127 chr2 17120113 17120860 -233566994 - LTR8A LTR ERV1 0 727 34 760 250 154 11 chr2 17120948 17121355 -233566499 + L2 LINE L2 2754 3235 -78 25 108 0 0 chr2 17121419 17121521 -233566333 + AT_rich Low_complexity Low_complexity 1 102 0 1044 282 52 63 chr2 17121648 17122170 -233565684 + L1ME3A LINE L1 5333 5848 -322 309 300 150 22 chr2 17123292 17123550 -233564304 + L2 LINE L2 2791 3084 -188 218 216 14 0 chr2 17125442 17125516 -233562338 + (TA)n Simple_repeat Simple_repeat 2 76 0 899 152 28 0 chr2 17128832 17129017 -233558837 - AluSc SINE Alu 0 320 132 2048 88 35 0 chr2 17129017 17129301 -233558553 - AluY SINE Alu -17 294 1 585 264 159 42 chr2 17131230 17131768 -233556086 + L1ME4a LINE L1 5373 5955 -166 346 270 9 61 chr2 17131833 17131948 -233555906 - L2 LINE L2 -47 3266 3158 334 218 52 15 chr2 17132231 17132334 -233555520 + MIR SINE MIR 42 153 -68 489 342 35 5 chr2 17132474 17132673 -233555181 - MIR SINE MIR 0 262 58 230 299 23 23 chr2 17133088 17133175 -233554679 + MIR SINE MIR 38 124 -84 282 106 0 0 chr2 17133390 17133437 -233554417 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 35 0 0 chr2 17134097 17134126 -233553728 + AT_rich Low_complexity Low_complexity 1 29 0 182 217 87 0 chr2 17134372 17134418 -233553436 + MIR SINE MIR 122 171 -91 1666 169 180 96 chr2 17134560 17135153 -233552701 + L1ME2 LINE L1 5344 5986 -178 396 280 69 52 chr2 17135337 17135759 -233552095 - L1 LINE L1 -3045 3101 2673 484 304 77 0 chr2 17136082 17136289 -233551565 + Charlie8 DNA MER1_type 1570 1792 -625 533 230 44 88 chr2 17137912 17138138 -233549716 - L2 LINE L2 -1 3312 3097 2175 110 3 0 chr2 17138653 17138944 -233548910 + AluSq SINE Alu 1 292 -21 1824 186 39 14 chr2 17139271 17139686 -233548168 - L1PBa LINE L1 -5834 1029 605 1395 246 99 8 chr2 17139699 17140195 -233547659 - L1PBa LINE L1 -6316 547 7 2035 246 74 49 chr2 17140205 17140573 -233547281 + L1M4 LINE L1 3504 3861 -2285 1527 177 9 40 chr2 17140573 17140895 -233546959 + AluJo SINE Alu 1 312 0 2035 246 74 49 chr2 17140895 17141360 -233546494 + L1M4 LINE L1 3861 4358 -1788 769 313 18 3 chr2 17141533 17141859 -233545995 + L1ME3A LINE L1 2669 2999 -3147 22 0 0 0 chr2 17142118 17142140 -233545714 + AT_rich Low_complexity Low_complexity 1 22 0 1165 241 90 115 chr2 17142234 17143300 -233544554 + L1ME3A LINE L1 4013 5051 -1095 297 0 0 0 chr2 17143476 17143509 -233544345 + (CA)n Simple_repeat Simple_repeat 2 34 0 251 308 8 8 chr2 17143509 17143626 -233544228 + L1ME3A LINE L1 5321 5437 -727 2774 177 4 2 chr2 17143631 17144133 -233543721 + L1PA8 LINE L1 1 503 -5372 25958 143 10 20 chr2 17144161 17149890 -233537964 + L1PA8 LINE L1 797 6476 -11 755 275 112 25 chr2 17149871 17150308 -233537546 + L1ME3A LINE L1 5416 5890 -280 * 1006 261 57 63 chr2 17150335 17150739 -233537115 - MER45C DNA AcHobo -502 451 1 890 255 34 40 chr2 17150805 17151103 -233536751 + L1MC4 LINE L1 6810 7105 -937 272 247 0 12 chr2 17151171 17151252 -233536602 + L1MC5 LINE L1 7002 7081 -880 513 320 76 0 chr2 17151343 17151568 -233536286 + L1MC4 LINE L1 7189 7430 -612 366 266 83 18 chr2 17151552 17151770 -233536084 + L1MC5 LINE L1 7252 7483 -478 * 284 270 184 9 chr2 17151849 17152062 -233535792 + L1MC4 LINE L1 7648 8025 -17 2221 194 41 59 chr2 17154283 17154398 -233533456 - MER54A LTR ERVL 0 644 528 1392 40 0 60 chr2 17154398 17154598 -233533256 + L1PA6 LINE L1 5967 6154 0 2221 194 41 59 chr2 17154598 17154637 -233533217 - MER54A LTR ERVL -116 528 490 8194 75 2 4 chr2 17154637 17155710 -233532144 - MER11C LTR ERVK 0 1071 1 2221 194 41 59 chr2 17155710 17156419 -233531435 - MER54A LTR ERVL -154 490 1 1270 256 109 41 chr2 17156483 17156951 -233530903 + MLT1D LTR MaLR 6 505 0 390 261 27 60 chr2 17157037 17157221 -233530633 - MER5B DNA MER1_type 0 178 1 296 223 330 10 chr2 17157241 17157344 -233530510 + L2 LINE L2 3137 3272 0 1330 264 89 33 chr2 17157492 17157976 -233529878 - MLT1J LTR MaLR 0 511 1 188 300 0 0 chr2 17158075 17158125 -233529729 - L2 LINE L2 -259 3054 3005 194 253 103 46 chr2 17158863 17158950 -233528904 - MIR SINE MIR -7 255 164 229 331 84 28 chr2 17159717 17159859 -233527995 + L2 LINE L2 2905 3054 -218 282 278 83 30 chr2 17160267 17160400 -233527454 - L2 LINE L2 -171 3142 3003 21 36 0 0 chr2 17160938 17160966 -233526888 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr2 17162711 17162753 -233525101 + AT_rich Low_complexity Low_complexity 1 42 0 5235 72 0 16 chr2 17162770 17163480 -233524374 - L1PA7 LINE L1 -1668 4478 3780 6702 74 1 0 chr2 17163484 17165157 -233522697 + L1PA7 LINE L1 4466 6143 -11 438 207 0 26 chr2 17165251 17165367 -233522487 - HAL1 LINE L1 -105 2402 2290 6438 176 65 12 chr2 17165469 17167038 -233520816 - L1M1 LINE L1 -4065 1263 2 2765 178 41 6 chr2 17167049 17167589 -233520265 - L1 LINE L1 -1957 4189 3631 23 33 0 0 chr2 17167595 17167625 -233520229 + AT_rich Low_complexity Low_complexity 1 30 0 307 274 71 0 chr2 17167630 17167743 -233520111 - HAL1 LINE L1 -865 1642 1522 523 290 44 1 chr2 17167878 17168035 -233519819 + MIR SINE MIR 8 172 -36 21 0 0 0 chr2 17169152 17169173 -233518681 + AT_rich Low_complexity Low_complexity 1 21 0 2507 222 83 32 chr2 17169617 17170365 -233517489 - L1MB7 LINE L1 -10 6174 5389 183 345 160 8 chr2 17170383 17170502 -233517352 - MIR SINE MIR -56 152 16 25 31 0 0 chr2 17170544 17170576 -233517278 + AT_rich Low_complexity Low_complexity 1 32 0 207 191 0 43 chr2 17170729 17170776 -233517078 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 323 356 44 7 chr2 17172369 17172504 -233515350 + MIR3 SINE MIR 9 148 -60 240 355 77 69 chr2 17172516 17172907 -233514947 - LTR16C LTR ERVL -12 479 86 1284 141 5 0 chr2 17173087 17173296 -233514558 + L1PB3 LINE L1 5954 6160 -345 977 111 6 22 chr2 17173296 17173476 -233514378 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 1284 141 5 0 chr2 17173476 17173638 -233514216 + L1PB3 LINE L1 6160 6505 0 371 260 39 78 chr2 17173728 17173811 -233514043 - MIR SINE MIR -87 175 99 878 216 72 29 chr2 17173811 17174019 -233513835 - MER20 DNA MER1_type -2 217 1 371 260 39 78 chr2 17174019 17174089 -233513765 - MIR SINE MIR -163 99 28 204 91 61 0 chr2 17174320 17174353 -233513501 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 403 306 80 86 chr2 17174362 17174699 -233513155 - L2 LINE L2 -2 3270 2936 288 344 23 31 chr2 17175798 17175926 -233511928 + MER5A DNA MER1_type 63 189 0 1499 289 98 14 chr2 17177079 17177939 -233509915 - L2 LINE L2 -5 3308 2377 689 270 90 17 chr2 17179185 17179257 -233508597 - MIR SINE MIR -7 255 190 1444 87 73 23 chr2 17179257 17179476 -233508378 - MER30 DNA MER1_type 0 230 1 689 270 90 17 chr2 17179476 17179636 -233508218 - MIR SINE MIR -72 190 6 1887 157 0 3 chr2 17180156 17180456 -233507398 + AluJo SINE Alu 13 311 -1 294 326 79 28 chr2 17180960 17181175 -233506679 - MIR SINE MIR -34 228 3 1672 172 48 43 chr2 17182286 17182658 -233505196 - THE1C LTR MaLR -1 374 1 407 305 92 62 chr2 17183451 17183756 -233504098 + HAL1 LINE L1 812 1125 -1382 12789 86 37 2 chr2 17183999 17186507 -233501347 - L1PA7 LINE L1 -3 6151 3437 345 298 14 20 chr2 17186710 17186872 -233500982 + L1M4c LINE L1 1549 1913 -830 470 277 31 13 chr2 17186872 17187031 -233500823 - MLT1K LTR MaLR -8 580 419 409 257 45 56 chr2 17187902 17188081 -233499773 - MER5B DNA MER1_type -1 177 1 6433 32 0 4 chr2 17189009 17189783 -233498071 - L1PA4 LINE L1 -3 6152 5382 6172 278 94 16 chr2 17190281 17192527 -233495327 + L2 LINE L2 299 2718 -596 925 252 47 50 chr2 17192526 17192844 -233495010 + L2 LINE L2 2991 3307 -6 * 39 68 0 0 chr2 17192888 17192962 -233494892 + AT_rich Low_complexity Low_complexity 1 74 0 286 369 40 0 chr2 17193001 17193150 -233494704 - MIR SINE MIR -2 260 106 21 0 0 0 chr2 17193891 17193912 -233493942 + AT_rich Low_complexity Low_complexity 1 21 0 1044 146 39 10 chr2 17194132 17194338 -233493516 - L1PA13 LINE L1 -2 6161 5950 1126 124 6 0 chr2 17194446 17194615 -233493239 - L1PA13 LINE L1 -382 5779 5610 23 0 0 0 chr2 17195084 17195107 -233492747 + AT_rich Low_complexity Low_complexity 1 23 0 288 155 0 107 chr2 17195774 17195858 -233491996 + L1MB4 LINE L1 6106 6180 0 201 306 0 0 chr2 17196182 17196231 -233491623 - MIR SINE MIR -24 238 190 2182 162 50 29 chr2 17197714 17198195 -233489659 + L1MC2 LINE L1 5852 6342 -2 576 288 131 4 chr2 17199907 17200136 -233487718 + MIR SINE MIR 2 259 -3 26 0 0 0 chr2 17201152 17201178 -233486676 + AT_rich Low_complexity Low_complexity 1 26 0 1960 281 139 8 chr2 17201824 17202748 -233485106 - L2 LINE L2 -10 3303 2256 467 284 86 25 chr2 17204353 17204515 -233483339 - MIR SINE MIR -16 246 75 385 283 33 8 chr2 17204535 17204655 -233483199 - L2 LINE L2 0 3313 3191 2100 91 7 11 chr2 17205018 17205336 -233482518 + AluSq SINE Alu 1 317 0 234 215 187 56 chr2 17205372 17205479 -233482375 + L2 LINE L2 3192 3312 -1 308 253 13 13 chr2 17205637 17205712 -233482142 + MIR3 SINE MIR 85 159 -49 356 237 254 34 chr2 17206287 17206464 -233481390 - MIR SINE MIR -10 252 37 23 33 0 0 chr2 17207122 17207152 -233480702 + AT_rich Low_complexity Low_complexity 1 30 0 2274 87 7 0 chr2 17208478 17208778 -233479076 - AluY SINE Alu -9 302 1 200 143 18 71 chr2 17208938 17208994 -233478860 + L2 LINE L2 2294 2346 -968 1992 110 0 33 chr2 17209721 17210022 -233477832 + AluSg SINE Alu 1 291 -19 259 202 11 43 chr2 17213783 17213877 -233473977 + (CCCCG)n Simple_repeat Simple_repeat 5 95 0 229 289 138 58 chr2 17216124 17216349 -233471505 + L2 LINE L2 3015 3257 -56 22 0 0 0 chr2 17216806 17216828 -233471026 + AT_rich Low_complexity Low_complexity 1 22 0 275 382 65 58 chr2 17217030 17217595 -233470259 + L2 LINE L2 2398 2966 -348 535 286 74 30 chr2 17218218 17218449 -233469405 + MIR SINE MIR 3 243 -19 790 197 32 92 chr2 17218490 17218708 -233469146 - MER63A DNA MER1_type -3 207 3 201 289 0 0 chr2 17219197 17219242 -233468612 - L2 LINE L2 -19 3253 3209 447 330 81 73 chr2 17219483 17219744 -233468110 - L2 LINE L2 -5 3267 3005 213 411 28 0 chr2 17219893 17220000 -233467854 + L2 LINE L2 3177 3286 -27 276 224 141 0 chr2 17222380 17222465 -233465389 + L1ME3A LINE L1 6046 6142 -28 295 256 11 33 chr2 17222479 17222569 -233465285 + GA-rich Low_complexity Low_complexity 2 89 0 1629 171 7 10 chr2 17223806 17224104 -233463750 + AluJb SINE Alu 6 302 -10 22 56 0 0 chr2 17224384 17224420 -233463434 + AT_rich Low_complexity Low_complexity 1 36 0 36 23 0 0 chr2 17224489 17224532 -233463322 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr2 17224609 17224644 -233463210 + AT_rich Low_complexity Low_complexity 1 35 0 1190 157 5 20 chr2 17225651 17225855 -233461999 + AluJb SINE Alu 112 312 0 286 47 47 0 chr2 17226715 17226758 -233461096 + L1MC1 LINE L1 6288 6332 -1 419 276 20 20 chr2 17227138 17227251 -233460603 - MIR SINE MIR -59 149 37 207 200 57 29 chr2 17227331 17227401 -233460453 - L3b LINE CR1 -189 1394 1323 1305 229 35 10 chr2 17227406 17227716 -233460138 - MLT1C LTR MaLR -6 461 144 344 119 0 17 chr2 17227713 17227772 -233460082 + FLAM_A SINE Alu 74 131 -2 * 240 35 0 0 chr2 17227943 17227972 -233459882 + (TAGA)n Simple_repeat Simple_repeat 1 29 0 601 324 68 30 chr2 17228331 17228757 -233459097 + L2 LINE L2 2148 2589 -725 1385 188 0 4 chr2 17228895 17229129 -233458725 + AluJo SINE Alu 24 256 -56 224 371 51 35 chr2 17230367 17230699 -233457155 - L2 LINE L2 -221 3051 2709 327 368 64 42 chr2 17230732 17231091 -233456763 - L2 LINE L2 -703 2611 2245 216 0 0 0 chr2 17231176 17231200 -233456654 + (A)n Simple_repeat Simple_repeat 1 24 0 1906 138 0 24 chr2 17232288 17232584 -233455270 + AluJo SINE Alu 11 299 -13 21 0 0 0 chr2 17234223 17234244 -233453610 + GC_rich Low_complexity Low_complexity 1 21 0 238 313 113 26 chr2 17234776 17234891 -233452963 + L2 LINE L2 3185 3309 -4 23 0 0 0 chr2 17236084 17236107 -233451747 + AT_rich Low_complexity Low_complexity 1 23 0 359 232 11 32 chr2 17238056 17238151 -233449703 - MIR3 SINE MIR -3 205 113 321 305 0 0 chr2 17239053 17239135 -233448719 + CT-rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr2 17240556 17240584 -233447270 + AT_rich Low_complexity Low_complexity 1 28 0 268 307 217 12 chr2 17242408 17242574 -233445280 + MIR SINE MIR 59 258 -4 275 269 120 9 chr2 17242726 17242834 -233445020 - L2 LINE L2 -19 3294 3175 186 287 98 16 chr2 17243721 17243843 -233444011 + MIR SINE MIR 101 232 -30 193 115 19 39 chr2 17244609 17244661 -233443193 + (CATA)n Simple_repeat Simple_repeat 4 54 0 260 236 81 73 chr2 17245150 17245325 -233442529 + MIR SINE MIR 16 184 -64 180 0 0 0 chr2 17247137 17247157 -233440697 + (A)n Simple_repeat Simple_repeat 1 20 0 2548 43 0 10 chr2 17247160 17247465 -233440389 + AluY SINE Alu 3 304 -7 392 332 50 20 chr2 17247465 17247663 -233440191 - MIR SINE MIR -25 237 34 25 0 0 0 chr2 17247690 17247715 -233440139 + AT_rich Low_complexity Low_complexity 1 25 0 389 216 94 41 chr2 17247732 17248046 -233439808 - L1MC5 LINE L1 -71 7890 7528 233 294 106 50 chr2 17248118 17248278 -233439576 + MIR SINE MIR 84 252 -10 268 288 15 0 chr2 17248289 17248355 -233439499 + GA-rich Low_complexity Low_complexity 2 68 0 209 333 39 0 chr2 17248772 17248850 -233439004 + MIR3 SINE MIR 85 165 -43 467 340 86 5 chr2 17248866 17249063 -233438791 + MIR SINE MIR 2 214 -48 255 143 131 12 chr2 17249953 17250037 -233437817 - L1ME4a LINE L1 -4 6117 6024 404 302 115 21 chr2 17250106 17250341 -233437513 - L1ME4a LINE L1 -225 5896 5640 220 204 0 0 chr2 17250704 17250748 -233437106 + (CAT)n Simple_repeat Simple_repeat 2 45 0 261 411 40 0 chr2 17251088 17251212 -233436642 - L2 LINE L2 -2 3270 3142 259 399 21 0 chr2 17251731 17251874 -233435980 + MIR SINE MIR 117 262 0 201 344 41 25 chr2 17251929 17252051 -233435803 + L2 LINE L2 3189 3312 -1 512 235 132 29 chr2 17252291 17252501 -233435353 - MIR SINE MIR -10 252 14 469 241 157 31 chr2 17252567 17252758 -233435096 - L2 LINE L2 0 3313 3099 201 259 52 0 chr2 17253554 17253612 -233434242 + MIR SINE MIR 129 189 -73 431 277 72 39 chr2 17253728 17253907 -233433947 - MIR SINE MIR -57 205 18 222 150 0 0 chr2 17253925 17253965 -233433889 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1445 211 143 46 chr2 17254110 17254564 -233433290 - MLT1J LTR MaLR -10 501 4 358 306 41 20 chr2 17254731 17254878 -233432976 + MIR3 SINE MIR 36 185 -23 204 40 0 0 chr2 17255439 17255464 -233432390 + (TA)n Simple_repeat Simple_repeat 2 26 0 537 314 77 41 chr2 17255574 17255918 -233431936 + L1M4 LINE L1 4696 5059 -1087 506 356 85 36 chr2 17256295 17256930 -233430924 - L2 LINE L2 -14 3258 2594 22 70 0 0 chr2 17257439 17257482 -233430372 + AT_rich Low_complexity Low_complexity 1 43 0 253 208 57 75 chr2 17258432 17258538 -233429316 - MIR SINE MIR -50 212 109 1342 80 0 0 chr2 17258823 17258985 -233428869 + AluSc SINE Alu 132 293 -16 22 0 0 0 chr2 17259927 17259949 -233427905 + AT_rich Low_complexity Low_complexity 1 22 0 2324 105 30 21 chr2 17260991 17261363 -233426491 + THE1C LTR MaLR 1 375 0 612 277 85 26 chr2 17261363 17261975 -233425879 - L1ME LINE L1 -357 5805 5131 351 289 87 14 chr2 17262043 17262261 -233425593 - L1ME LINE L1 -1172 4974 4741 28 29 0 0 chr2 17262454 17262489 -233425365 + AT_rich Low_complexity Low_complexity 1 35 0 225 259 27 36 chr2 17262664 17262776 -233425078 - HAL1 LINE L1 -385 2122 2012 2361 100 0 0 chr2 17262883 17263183 -233424671 + AluSx SINE Alu 5 304 -8 453 291 141 9 chr2 17263219 17263439 -233424415 - HAL1 LINE L1 -604 1903 1655 5790 155 46 12 chr2 17263465 17265241 -233422613 - L1MA8 LINE L1 -156 7554 5593 910 229 0 0 chr2 17265254 17265455 -233422399 - L1MA8 LINE L1 -4553 3012 2812 2511 71 0 3 chr2 17265624 17265933 -233421921 + AluSg SINE Alu 1 308 -2 237 276 124 48 chr2 17265972 17266077 -233421777 - MIR SINE MIR -76 132 20 929 125 8 0 chr2 17266331 17266459 -233421395 + AluJb SINE Alu 1 129 -183 212 98 0 49 chr2 17266460 17266501 -233421353 + (GAAAA)n Simple_repeat Simple_repeat 5 43 0 1162 128 0 0 chr2 17266520 17266684 -233421170 + AluJb SINE Alu 129 292 -20 501 279 134 0 chr2 17268428 17268600 -233419254 - MIR SINE MIR -24 238 44 325 295 25 25 chr2 17268822 17268944 -233418910 + L3 LINE CR1 1148 1269 -308 307 284 0 0 chr2 17268944 17269039 -233418815 + L1M4 LINE L1 4774 4868 -1278 1654 133 149 0 chr2 17269262 17269563 -233418291 + MER7A DNA MER2_type 3 346 0 21 0 0 0 chr2 17270027 17270048 -233417806 + AT_rich Low_complexity Low_complexity 1 21 0 1042 207 0 20 chr2 17270772 17270970 -233416884 - AluJb SINE Alu -32 280 87 405 284 73 19 chr2 17271191 17271506 -233416348 - L1MEd LINE L1 -865 1625 1277 2160 132 3 0 chr2 17271511 17271821 -233416033 + AluSx SINE Alu 2 312 0 35 0 0 0 chr2 17271821 17271856 -233415998 + AT_rich Low_complexity Low_complexity 1 35 0 471 231 12 24 chr2 17272010 17272179 -233415675 - L1MEd LINE L1 -4991 1128 962 391 303 66 0 chr2 17273087 17273239 -233414615 - MIR SINE MIR -13 249 88 1753 130 70 0 chr2 17273249 17273519 -233414335 + AluSg1 SINE Alu 1 289 -20 324 340 46 41 chr2 17273865 17274059 -233413795 - MIR3 SINE MIR -8 200 6 264 343 102 19 chr2 17274364 17274580 -233413274 + L2 LINE L2 2628 2861 -453 230 301 125 7 chr2 17274734 17274870 -233412984 + L2 LINE L2 3161 3312 -1 234 342 40 0 chr2 17275110 17275186 -233412668 + MIR SINE MIR 36 114 -148 192 152 0 0 chr2 17275266 17275299 -233412555 + CT-rich Low_complexity Low_complexity 2 34 0 439 224 47 0 chr2 17275634 17275741 -233412113 + MER94 DNA DNA 7 118 -16 1018 263 79 67 chr2 17275755 17276234 -233411620 + L2 LINE L2 2825 3309 -4 2297 70 10 3 chr2 17276748 17277049 -233410805 - AluY SINE Alu -5 306 4 339 278 10 10 chr2 17277221 17277318 -233410536 - MIR SINE MIR -67 141 45 212 254 34 0 chr2 17277661 17277720 -233410134 + MIR SINE MIR 99 159 -103 338 289 10 10 chr2 17278158 17278255 -233409599 + MIR SINE MIR 45 141 -67 237 235 134 8 chr2 17278500 17278619 -233409235 - L1ME4a LINE L1 -3 6118 5985 351 239 31 63 chr2 17279027 17279247 -233408607 - L1ME4a LINE L1 -298 5823 5637 867 305 81 44 chr2 17279834 17280448 -233407406 - L2 LINE L2 -410 2904 2268 539 335 53 8 chr2 17281665 17281910 -233405944 - MIR SINE MIR 0 262 7 301 287 78 35 chr2 17282562 17282677 -233405177 + MIR3 SINE MIR 73 192 -16 182 336 33 33 chr2 17283652 17283774 -233404080 - L2 LINE L2 -220 3052 2931 441 0 0 0 chr2 17284209 17284258 -233403596 + (CA)n Simple_repeat Simple_repeat 2 50 0 251 275 27 101 chr2 17284435 17284584 -233403270 - L2 LINE L2 -636 2678 2541 * 363 300 12 0 chr2 17284556 17284691 -233403163 + MIR SINE MIR 34 169 -67 531 250 22 7 chr2 17285166 17285302 -233402552 - MIR3 SINE MIR -9 199 62 212 345 177 0 chr2 17285475 17285588 -233402266 - L2 LINE L2 -1 3271 3139 455 320 156 44 chr2 17285749 17286383 -233401471 - L2 LINE L2 0 3272 2567 308 337 0 20 chr2 17286860 17286958 -233400896 + MIR SINE MIR 28 123 -139 209 122 0 24 chr2 17287844 17287885 -233399969 + (TTA)n Simple_repeat Simple_repeat 3 42 0 290 328 34 8 chr2 17287995 17288114 -233399740 - MIR SINE MIR -82 180 59 267 152 0 0 chr2 17289486 17289532 -233398322 + T-rich Low_complexity Low_complexity 1 46 0 650 250 127 9 chr2 17289998 17290226 -233397628 + L1ME3A LINE L1 5584 5838 -332 240 254 71 63 chr2 17291760 17291886 -233395968 - MIR3 SINE MIR -81 127 1 181 327 0 36 chr2 17291886 17291975 -233395879 + L2 LINE L2 2644 2728 -586 224 242 16 0 chr2 17292042 17292104 -233395750 + L2 LINE L2 3207 3269 -3 187 178 0 67 chr2 17292174 17292219 -233395635 - L2 LINE L2 -90 3182 3141 1350 139 28 12 chr2 17292423 17292675 -233395179 + MLT1B LTR MaLR 1 256 -134 254 277 10 30 chr2 17292763 17292864 -233394990 - L1ME LINE L1 -333 5837 5739 659 140 18 0 chr2 17292864 17292978 -233394876 + MLT1B LTR MaLR 275 390 0 189 333 53 0 chr2 17293635 17293710 -233394144 + MIR SINE MIR 74 152 -110 24 32 0 0 chr2 17345386 17345417 -233342437 + AT_rich Low_complexity Low_complexity 1 31 0 259 277 45 54 chr2 17346038 17346150 -233341704 + MER5B DNA MER1_type 2 112 -66 551 292 40 101 chr2 17346369 17346923 -233340931 - MLT1F1 LTR MaLR -35 520 1 237 279 0 15 chr2 17347210 17347278 -233340576 + (TA)n Simple_repeat Simple_repeat 2 68 0 433 280 118 65 chr2 17347586 17348120 -233339734 + MLT1L LTR MaLR 3 492 -19 340 204 65 43 chr2 17348242 17348335 -233339519 + L1MA6 LINE L1 6203 6297 -3 237 304 51 29 chr2 17350138 17350243 -233337611 - MER5A DNA MER1_type -61 128 11 198 255 11 85 chr2 17350341 17350435 -233337419 - L2 LINE L2 0 3272 3186 225 0 0 0 chr2 17350459 17350484 -233337370 + (CAGTG)n Simple_repeat Simple_repeat 1 25 0 293 221 123 41 chr2 17350977 17351099 -233336755 + MIR3 SINE MIR 46 177 -31 180 223 87 107 chr2 17351545 17351648 -233336206 - L2 LINE L2 -218 3054 2954 238 263 0 74 chr2 17352657 17352752 -233335102 - MIR3 SINE MIR -17 191 104 1939 154 3 3 chr2 17352779 17353071 -233334783 + AluSx SINE Alu 3 294 -18 231 214 0 0 chr2 17353427 17353469 -233334385 + (CA)n Simple_repeat Simple_repeat 1 42 0 2107 289 180 12 chr2 17353634 17354762 -233333092 - L2 LINE L2 -261 3052 1735 1757 176 17 0 chr2 17355482 17355777 -233332077 - AluJb SINE Alu -12 300 1 256 311 172 0 chr2 17355871 17356051 -233331803 - L2 LINE L2 -1210 2104 1894 211 269 144 19 chr2 17356776 17356880 -233330974 + L2 LINE L2 777 893 -2421 285 272 193 0 chr2 17357470 17357584 -233330270 + L2 LINE L2 2397 2532 -782 2305 100 3 13 chr2 17357832 17358142 -233329712 - AluSq SINE Alu -6 307 1 270 250 143 0 chr2 17358379 17358463 -233329391 + MIR SINE MIR 96 191 -71 2468 71 0 0 chr2 17359158 17359454 -233328400 - AluSg SINE Alu -14 296 1 25 51 0 0 chr2 17359549 17359588 -233328266 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 17360281 17360319 -233327535 + AT_rich Low_complexity Low_complexity 1 38 0 430 205 154 77 chr2 17360547 17360703 -233327151 - MER5A DNA MER1_type -12 177 10 430 253 101 0 chr2 17360832 17360931 -233326923 + Charlie1 DNA MER1_type 3 111 -2650 534 135 10 52 chr2 17361033 17361129 -233326725 + FRAM SINE Alu 55 146 -30 658 75 9 9 chr2 17361134 17361241 -233326613 + (CA)n Simple_repeat Simple_repeat 2 108 0 2231 104 16 3 chr2 17361884 17362192 -233325662 + AluSx SINE Alu 1 312 0 1082 157 15 35 chr2 17363261 17363458 -233324396 - MER20 DNA MER1_type -3 216 24 210 333 69 40 chr2 17363656 17363830 -233324024 + MIR SINE MIR 63 241 -21 2140 147 125 2 chr2 17364041 17364464 -233323390 - L1MD1 LINE L1 0 6242 5768 2371 245 34 42 chr2 17364464 17364729 -233323125 - L1M4 LINE L1 -1473 4673 4407 5178 138 37 8 chr2 17364729 17365623 -233322231 - L1MC1 LINE L1 0 6333 5414 2371 245 34 42 chr2 17365623 17366281 -233321573 - L1M4 LINE L1 -1739 4407 3758 354 199 23 26 chr2 17366313 17366405 -233321449 - MER2 DNA MER2_type -149 90 2 1216 277 68 9 chr2 17366407 17366977 -233320877 - L1M4 LINE L1 -2377 3769 3166 786 200 0 7 chr2 17367444 17367589 -233320265 + MLT1D LTR MaLR 312 455 -50 427 219 24 65 chr2 17368286 17368409 -233319445 + L1MDa LINE L1 409 526 -6014 694 247 59 18 chr2 17368418 17368631 -233319223 + L1MDa LINE L1 420 776 -5764 334 145 118 13 chr2 17368734 17368805 -233319049 - Charlie1 DNA MER1_type -56 2705 2626 2298 113 7 0 chr2 17368805 17369115 -233318739 - AluSx SINE Alu 0 312 1 468 170 41 72 chr2 17369119 17369313 -233318541 - Charlie1 DNA MER1_type -2519 242 55 1992 188 94 30 chr2 17369595 17370064 -233317790 - MLT1D LTR MaLR 0 505 7 512 255 71 42 chr2 17370117 17370329 -233317525 - MIR SINE MIR 0 262 45 372 355 12 30 chr2 17370538 17370704 -233317150 - MIR SINE MIR -80 182 20 313 254 14 0 chr2 17371214 17371285 -233316569 - L2 LINE L2 0 3313 3242 223 327 24 54 chr2 17371721 17371889 -233315965 - L2 LINE L2 -555 2759 2597 587 80 36 27 chr2 17372645 17372757 -233315097 + CT-rich Low_complexity Low_complexity 4 116 0 2067 148 0 3 chr2 17372759 17373064 -233314790 - AluSx SINE Alu -3 309 6 1502 181 36 53 chr2 17373071 17373374 -233314480 - AluJo SINE Alu -14 298 1 1943 97 60 0 chr2 17373677 17374060 -233313794 + AluSx SINE Alu 1 399 0 2083 183 45 0 chr2 17374080 17374484 -233313370 - MER61C LTR ERV1 0 434 13 2462 72 0 3 chr2 17374833 17375138 -233312716 + AluY SINE Alu 1 304 -7 266 290 38 2 chr2 17375684 17375791 -233312063 + MIR SINE MIR 33 143 -65 1542 210 39 71 chr2 17375801 17376311 -233311543 + MLT1D LTR MaLR 1 494 -11 2046 108 32 49 chr2 17376377 17376746 -233311108 + THE1B LTR MaLR 2 364 0 207 0 0 0 chr2 17377286 17377309 -233310545 + (T)n Simple_repeat Simple_repeat 1 23 0 1558 115 0 63 chr2 17377311 17377564 -233310290 - AluSx SINE Alu -75 237 1 2575 183 84 47 chr2 17378796 17379497 -233308357 - LTR8A LTR ERV1 0 727 1 200 292 160 14 chr2 17380660 17380804 -233307050 + MIR SINE MIR 28 192 -70 747 274 160 49 chr2 17381693 17382284 -233305570 + L2 LINE L2 2381 3107 -206 2103 97 0 14 chr2 17382284 17382603 -233305251 + AluSx SINE Alu 1 315 0 747 274 160 49 chr2 17382603 17382836 -233305018 + L2 LINE L2 3107 3313 0 195 238 24 0 chr2 17386038 17386080 -233301774 + L2 LINE L2 3261 3303 -10 1540 213 7 10 chr2 17386747 17387048 -233300806 + AluJo SINE Alu 1 300 -12 2015 157 0 6 chr2 17387617 17387930 -233299924 + AluSx SINE Alu 2 312 0 275 321 37 0 chr2 17387940 17388021 -233299833 + MIR SINE MIR 2 85 -177 245 351 78 10 chr2 17388133 17388338 -233299516 - MARNA DNA Mariner -194 392 174 193 410 142 0 chr2 17388436 17388570 -233299284 - L2 LINE L2 -12 3260 3108 42 65 0 0 chr2 17388579 17388656 -233299198 + AT_rich Low_complexity Low_complexity 1 77 0 242 248 143 19 chr2 17388714 17388819 -233299035 - L2 LINE L2 -249 3064 2947 246 360 105 36 chr2 17388866 17389811 -233298043 - L2 LINE L2 -493 2821 1812 318 267 67 42 chr2 17389811 17389976 -233297878 - MIR SINE MIR 0 262 94 1291 150 0 57 chr2 17390917 17391144 -233296710 - AluJb SINE Alu -20 292 79 1365 247 138 43 chr2 17391601 17392666 -233295188 - L1ME3 LINE L1 -47 6375 5211 2418 85 3 10 chr2 17392694 17393000 -233294854 - AluSp SINE Alu -9 304 1 2343 259 82 29 chr2 17393164 17395342 -233292512 - L1ME3 LINE L1 -2968 3438 1137 250 159 87 0 chr2 17395544 17395613 -233292241 - L1MA10 LINE L1 -2 6332 6258 * 2310 227 18 18 chr2 17395608 17396283 -233291571 - L1M4 LINE L1 -1426 4720 4046 2008 147 0 43 chr2 17397617 17397943 -233289911 + AluJo SINE Alu 1 312 0 228 278 49 14 chr2 17398178 17398322 -233289532 + L1ME4a LINE L1 5970 6118 -3 1214 175 100 65 chr2 17398610 17399039 -233288815 - L1MC4 LINE L1 -884 7158 6715 743 141 0 8 chr2 17399388 17399509 -233288345 - Tigger1 DNA MER2_type -3 2415 2296 9777 124 25 5 chr2 17399511 17401098 -233286756 - Tigger1 DNA MER2_type -800 1618 1 326 179 39 13 chr2 17401192 17401270 -233286584 + L1MEc LINE L1 56 135 -6261 740 100 67 0 chr2 17401280 17401400 -233286454 - Tigger1 DNA MER2_type -665 1753 1626 1126 263 22 3 chr2 17401601 17401913 -233285941 + L1MEc LINE L1 383 700 -5696 454 222 111 26 chr2 17402287 17402404 -233285450 - L2 LINE L2 0 3313 3187 224 361 116 7 chr2 17402479 17402634 -233285220 + L3 LINE CR1 1401 1572 -5 1884 169 3 10 chr2 17403673 17403963 -233283891 + AluJo SINE Alu 1 288 -24 189 0 0 0 chr2 17403966 17403987 -233283867 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 385 292 96 55 chr2 17404160 17404451 -233283403 + HAL1 LINE L1 1076 1378 -1129 499 270 100 104 chr2 17404654 17405146 -233282708 + L1MC4a LINE L1 4906 5395 -751 1216 153 0 100 chr2 17405289 17405325 -233282529 + Tigger4(Zombi) DNA MER2_type 1 39 -2692 1968 133 0 20 chr2 17405325 17405618 -233282236 + AluSx SINE Alu 1 287 -25 1216 153 0 100 chr2 17405618 17405830 -233282024 + Tigger4(Zombi) DNA MER2_type 39 224 -2507 2254 101 90 3 chr2 17405852 17406219 -233281635 + Tigger4(Zombi) DNA MER2_type 2333 2731 0 1328 220 92 96 chr2 17406219 17407056 -233280798 + L1MC4a LINE L1 5528 6361 -1447 1114 273 102 39 chr2 17407090 17407551 -233280303 + L1MC4a LINE L1 6430 6919 -889 952 149 0 0 chr2 17407560 17407708 -233280146 + AluJb SINE Alu 147 294 -18 1168 265 38 36 chr2 17407959 17408431 -233279423 + L1MC4 LINE L1 7068 7540 -502 583 191 20 14 chr2 17408521 17408668 -233279186 + L1MC4 LINE L1 7757 7904 -138 1081 134 45 25 chr2 17408760 17408961 -233278893 + MER2 DNA MER2_type 2 206 -139 7057 32 28 2 chr2 17409071 17410604 -233277250 + L1PA4 LINE L1 4599 6155 0 2298 128 77 26 chr2 17410610 17410622 -233277232 + L1MA4A LINE L1 5814 5824 -479 2221 121 0 13 chr2 17410622 17410936 -233276918 + AluSq SINE Alu 1 310 -3 2298 128 77 26 chr2 17410936 17411352 -233276502 + L1MA4A LINE L1 5824 6264 -39 458 312 42 8 chr2 17411494 17411635 -233276219 - MIR SINE MIR -46 162 21 363 310 90 26 chr2 17411654 17411809 -233276045 - L1ME LINE L1 -578 5543 5379 452 234 60 54 chr2 17413824 17414008 -233273846 + L1MEc LINE L1 2032 2216 -4180 293 264 13 110 chr2 17414013 17414168 -233273686 + L1MB7 LINE L1 4034 4173 -1973 314 231 126 35 chr2 17414275 17414418 -233273436 + L1MB7 LINE L1 4249 4404 -1742 3585 171 97 0 chr2 17414427 17415234 -233272620 + L1MB7 LINE L1 5258 6142 -42 1825 192 103 25 chr2 17415325 17416639 -233271215 - L1MDa LINE L1 -3642 2898 1438 2029 113 10 14 chr2 17417708 17418035 -233269819 + AluSq SINE Alu 1 313 0 380 311 0 10 chr2 17418131 17418234 -233269620 + L2 LINE L2 3200 3301 -12 1338 222 109 17 chr2 17419191 17419539 -233268315 + Charlie1b DNA MER1_type 1 406 -2355 2063 119 47 39 chr2 17419539 17419900 -233267954 + THE1B LTR MaLR 1 364 0 1338 222 109 17 chr2 17419900 17420029 -233267825 + Charlie1b DNA MER1_type 406 522 -1 21 0 0 0 chr2 17420093 17420114 -233267740 + AT_rich Low_complexity Low_complexity 1 21 0 1416 134 29 12 chr2 17420481 17420727 -233267127 + Tigger2a DNA MER2_type 2 251 -183 1121 138 53 0 chr2 17420793 17420981 -233266873 + Tigger2a DNA MER2_type 234 431 -3 430 186 153 8 chr2 17421550 17421674 -233266180 + MER104 DNA Tc2 1 142 -38 2233 112 0 16 chr2 17421933 17422247 -233265607 + AluSx SINE Alu 1 309 -3 1775 173 31 0 chr2 17422253 17422542 -233265312 + AluSx SINE Alu 1 298 -14 577 249 133 25 chr2 17422855 17423096 -233264758 + L2 LINE L2 3046 3312 -1 258 232 14 0 chr2 17424912 17424981 -233262873 + (TA)n Simple_repeat Simple_repeat 1 70 0 970 229 28 47 chr2 17425053 17425306 -233262548 - MIR SINE MIR -13 249 2 222 297 44 11 chr2 17425933 17426024 -233261830 + MIR3 SINE MIR 64 157 -51 421 344 44 27 chr2 17426029 17426212 -233261642 - MER5A DNA MER1_type -2 187 2 301 320 64 84 chr2 17426678 17426928 -233260926 - L2 LINE L2 -24 3248 3004 211 274 14 27 chr2 17427208 17427281 -233260573 + CT-rich Low_complexity Low_complexity 1 72 0 184 318 123 45 chr2 17427339 17427493 -233260361 - MIR3 SINE MIR -28 180 15 290 185 10 205 chr2 17427765 17427907 -233259947 + MIR SINE MIR 38 151 -100 267 194 14 83 chr2 17428805 17428877 -233258977 - MIR3 SINE MIR -26 182 116 2151 141 0 0 chr2 17428986 17429283 -233258571 + AluSx SINE Alu 1 297 -15 2253 118 0 3 chr2 17429285 17429598 -233258256 + AluSx SINE Alu 1 312 0 2049 127 11 0 chr2 17430093 17430429 -233257425 + AluSx SINE Alu 1 339 0 1877 163 46 3 chr2 17430803 17431152 -233256702 - MLT1A1 LTR MaLR -1 364 1 219 333 11 0 chr2 17432653 17432746 -233255108 + MIR SINE MIR 50 143 -119 1054 197 97 13 chr2 17433548 17433776 -233254078 - MIR SINE MIR 0 262 16 376 293 29 29 chr2 17433923 17434097 -233253757 + MIR SINE MIR 9 182 -80 488 249 227 18 chr2 17434463 17434793 -233253061 + MLT1L LTR MaLR 208 606 -9 200 298 25 50 chr2 17434849 17434970 -233252884 + MIR SINE MIR 74 191 -71 291 291 0 13 chr2 17435129 17435208 -233252646 + MIR3 SINE MIR 117 194 -14 243 137 78 39 chr2 17435297 17435348 -233252506 + L2 LINE L2 3160 3212 -60 201 147 0 0 chr2 17436613 17436647 -233251207 + (CATA)n Simple_repeat Simple_repeat 3 36 0 544 264 65 0 chr2 17436960 17437115 -233250739 - MLT1J LTR MaLR -342 169 5 313 373 121 20 chr2 17437841 17438147 -233249707 - L2 LINE L2 0 3272 2936 752 301 13 4 chr2 17438730 17438975 -233248879 - MIR SINE MIR 0 262 18 283 277 125 0 chr2 17438954 17439066 -233248788 + MIR SINE MIR 59 184 -78 * 1787 158 13 28 chr2 17439686 17440003 -233247851 - AluSx SINE Alu 0 312 1 216 255 20 0 chr2 17441267 17441318 -233246536 - L3 LINE CR1 -5 1572 1521 207 176 0 0 chr2 17441432 17441466 -233246388 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 2239 99 0 10 chr2 17442999 17443302 -233244552 + AluSg SINE Alu 1 300 -10 1732 178 7 13 chr2 17443309 17443618 -233244236 + AluJb SINE Alu 1 307 -5 180 158 0 0 chr2 17443955 17443993 -233243861 + (TATAA)n Simple_repeat Simple_repeat 4 41 0 331 358 12 18 chr2 17444174 17444339 -233243515 - L2 LINE L2 -176 3096 2933 535 263 8 0 chr2 17444678 17444811 -233243043 - MER58B DNA MER1_type -2 339 206 186 336 44 44 chr2 17444947 17445060 -233242794 - L2 LINE L2 -3 3310 3198 238 191 0 0 chr2 17445669 17445711 -233242143 + L1M4b LINE L1 2 43 -6816 632 136 0 0 chr2 17445714 17445817 -233242037 + L1MB8 LINE L1 6075 6177 -1 278 219 0 0 chr2 17446456 17446520 -233241334 - MER116 DNA Mariner -15 65 2 1770 81 0 0 chr2 17447309 17447518 -233240336 - AluSc SINE Alu -15 294 86 22 0 0 0 chr2 17447530 17447552 -233240302 + AT_rich Low_complexity Low_complexity 1 22 0 465 318 194 53 chr2 17447633 17449436 -233238418 + L2 LINE L2 1220 3270 -2 28 29 0 0 chr2 17449714 17449749 -233238105 + AT_rich Low_complexity Low_complexity 1 35 0 2014 162 0 0 chr2 17451421 17451724 -233236130 + AluSx SINE Alu 7 309 -3 308 320 30 0 chr2 17452435 17452535 -233235319 + MIR3 SINE MIR 4 106 -102 2966 88 4 77 chr2 17452725 17453203 -233234651 + MLT2A1 LTR ERVL 2 444 0 1936 145 7 0 chr2 17453763 17454045 -233233809 + AluJb SINE Alu 1 284 -28 634 124 0 50 chr2 17454050 17454171 -233233683 + FLAM_C SINE Alu 28 142 -1 855 167 107 38 chr2 17454323 17454363 -233233491 - MER33 DNA MER1_type -2261 324 288 2042 142 0 3 chr2 17454363 17454659 -233233195 - AluSx SINE Alu -17 295 1 855 167 107 38 chr2 17454659 17454881 -233232973 - MER33 DNA MER1_type -2297 288 44 224 338 22 37 chr2 17455014 17455150 -233232704 + L3 LINE CR1 1329 1462 -115 562 190 69 9 chr2 17455429 17455545 -233232309 - MER3 DNA MER1_type -72 137 15 329 367 30 30 chr2 17455642 17455811 -233232043 + MIR3 SINE MIR 3 171 -37 2316 82 0 41 chr2 17456210 17456525 -233231329 - AluSq SINE Alu -11 302 1 2335 102 0 0 chr2 17458028 17458333 -233229521 + AluSx SINE Alu 1 305 -7 882 161 42 7 chr2 17459017 17459229 -233228625 + L1MD3 LINE L1 7577 7995 0 376 100 0 33 chr2 17460008 17460068 -233227786 - MER5B DNA MER1_type -120 58 1 2276 115 3 0 chr2 17460338 17460642 -233227212 - AluSx SINE Alu -7 305 1 1571 155 41 31 chr2 17462204 17462494 -233225360 + AluSx SINE Alu 1 293 -19 37 0 0 0 chr2 17462518 17462555 -233225299 + AT_rich Low_complexity Low_complexity 1 37 0 1481 163 21 4 chr2 17464321 17464560 -233223294 - AluJo SINE Alu -69 243 1 418 227 154 9 chr2 17464577 17464687 -233223167 + L2 LINE L2 3187 3312 -1 802 212 39 59 chr2 17464838 17464974 -233222880 + AluJo SINE Alu 1 133 -179 2091 156 0 0 chr2 17464974 17465275 -233222579 + AluSx SINE Alu 1 301 -11 802 212 39 59 chr2 17465275 17465341 -233222513 + AluJo SINE Alu 133 199 -113 2255 183 4 73 chr2 17465512 17466081 -233221773 - LTR27 LTR ERV1 -139 497 2 357 308 8 15 chr2 17466213 17466346 -233221508 + L1ME4a LINE L1 4491 4622 -1524 2364 101 0 7 chr2 17466581 17466889 -233220965 - AluSg SINE Alu -4 306 1 323 260 53 53 chr2 17467472 17467622 -233220232 + L1ME4a LINE L1 5764 5913 -208 207 0 0 0 chr2 17467687 17467710 -233220144 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1723 133 68 0 chr2 17467714 17467978 -233219876 - AluSx SINE Alu -30 282 1 252 256 174 0 chr2 17467979 17468065 -233219789 + L2 LINE L2 3212 3312 -1 2251 106 6 13 chr2 17468096 17468408 -233219446 - AluSg SINE Alu 0 310 1 1806 148 0 80 chr2 17468683 17468797 -233219057 + AluSx SINE Alu 3 125 -187 2589 103 59 0 chr2 17468797 17469137 -233218717 - THE1B LTR MaLR -4 360 1 1806 148 0 80 chr2 17469137 17469346 -233218508 + AluSx SINE Alu 125 300 -12 198 289 0 0 chr2 17469402 17469447 -233218407 - L2 LINE L2 -6 3307 3263 893 178 14 0 chr2 17470034 17470180 -233217674 + MER45A DNA AcHobo 31 178 0 237 211 0 0 chr2 17470755 17470807 -233217047 + (CA)n Simple_repeat Simple_repeat 2 53 0 448 259 154 19 chr2 17471354 17471516 -233216338 + MIR SINE MIR 23 206 -56 1129 185 48 81 chr2 17472297 17472632 -233215222 + MER33 DNA MER1_type 1 324 0 355 271 16 49 chr2 17472705 17472827 -233215027 - MIR3 SINE MIR -2 206 89 193 259 123 0 chr2 17473446 17473527 -233214327 + MER5A DNA MER1_type 16 106 -83 221 263 62 50 chr2 17473574 17473654 -233214200 + L2 LINE L2 3166 3246 -26 872 252 48 0 chr2 17473964 17474174 -233213680 + MIR SINE MIR 38 257 -5 327 306 69 7 chr2 17474219 17474363 -233213491 - MIR3 SINE MIR -6 202 50 2232 120 0 13 chr2 17475776 17476092 -233211762 + AluSx SINE Alu 1 312 0 238 317 0 73 chr2 17476093 17476216 -233211638 - MIR SINE MIR -135 127 14 1818 78 47 0 chr2 17476506 17476763 -233211091 - L1MA5 LINE L1 0 6300 6032 241 293 6 52 chr2 17477492 17477666 -233210188 + (CAGAGA)n Simple_repeat Simple_repeat 3 168 0 288 365 16 24 chr2 17477793 17477919 -233209935 - MIR3 SINE MIR 0 208 84 2455 77 0 0 chr2 17478119 17478417 -233209437 - AluY SINE Alu -13 298 1 503 275 23 15 chr2 17479334 17479465 -233208389 - L2 LINE L2 0 3272 3141 199 294 71 12 chr2 17480378 17480463 -233207391 + MIR SINE MIR 20 109 -153 315 218 92 11 chr2 17481919 17482006 -233205848 + L2 LINE L2 3179 3272 0 345 294 74 49 chr2 17482227 17482390 -233205464 + MIR SINE MIR 38 204 -58 180 200 0 0 chr2 17482391 17482431 -233205423 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 431 143 24 12 chr2 17483839 17483923 -233203931 + MLT1G1 LTR MaLR 511 595 0 275 337 117 17 chr2 17485879 17486289 -233201565 + L2 LINE L2 2841 3291 -22 305 330 85 5 chr2 17486323 17486511 -233201343 - MLT1K LTR MaLR -346 242 40 1820 218 185 2 chr2 17487004 17487523 -233200331 - MER90 LTR ERV1 0 614 1 579 280 35 43 chr2 17487576 17487922 -233199932 - L1MEc LINE L1 -5515 881 539 1078 287 33 24 chr2 17487987 17488409 -233199445 - L2 LINE L2 -1135 2179 1754 377 278 53 27 chr2 17488578 17488868 -233198986 - L1MEc LINE L1 -5986 410 100 1566 217 110 35 chr2 17489676 17490186 -233197668 - L1MB7 LINE L1 0 6184 5627 283 333 15 15 chr2 17490465 17490597 -233197257 + L2 LINE L2 2343 2474 -840 351 305 102 0 chr2 17490823 17490941 -233196913 - L2 LINE L2 -5 3308 3179 414 0 0 0 chr2 17491415 17491461 -233196393 + (CA)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr2 17492158 17492179 -233195675 + AT_rich Low_complexity Low_complexity 1 21 0 721 206 120 11 chr2 17492677 17492861 -233194993 + MER3 DNA MER1_type 1 204 -5 224 263 32 53 chr2 17493271 17493366 -233194488 - L2 LINE L2 0 3313 3221 729 217 46 57 chr2 17494080 17494582 -233193272 - MLT1G LTR MaLR -4 538 1 330 266 69 113 chr2 17494601 17494936 -233192918 - MLT1G-int LTR MaLR -24 1347 1028 300 363 14 7 chr2 17495508 17495654 -233192200 - MLT1G-int LTR MaLR -832 539 393 575 278 115 44 chr2 17495845 17496375 -233191479 - MLT1G LTR MaLR -4 551 1 1785 152 28 3 chr2 17496709 17496999 -233190855 - AluSx SINE Alu -15 297 1 1423 113 100 80 chr2 17497467 17497768 -233190086 + MER2 DNA MER2_type 25 331 -14 213 329 13 13 chr2 17497772 17497848 -233190006 - MIR SINE MIR -108 154 79 248 197 0 79 chr2 17497989 17498065 -233189789 - Charlie7 DNA MER1_type -2505 107 38 24 0 0 0 chr2 17499436 17499460 -233188394 + GC_rich Low_complexity Low_complexity 1 24 0 321 345 111 34 chr2 17500549 17500784 -233187070 + L2 LINE L2 3010 3262 -10 21 36 0 0 chr2 17500826 17500854 -233187000 + AT_rich Low_complexity Low_complexity 1 28 0 255 308 33 22 chr2 17501464 17501555 -233186299 - MIR SINE MIR -148 114 23 803 129 14 43 chr2 17501908 17502048 -233185806 - AluSq/x SINE Alu -177 136 1 421 270 80 21 chr2 17503374 17503583 -233184271 - L1ME LINE L1 -346 5816 5591 1068 148 0 0 chr2 17504030 17504192 -233183662 + AluSg/x SINE Alu 137 298 -14 281 266 138 0 chr2 17505570 17505664 -233182190 + L2 LINE L2 2212 2318 -996 632 340 98 3 chr2 17505665 17505962 -233181892 + L2 LINE L2 2429 2753 -561 2285 97 0 7 chr2 17505962 17506260 -233181594 + AluSg SINE Alu 1 296 -14 1962 137 14 3 chr2 17506271 17506564 -233181290 + AluJb SINE Alu 1 296 -16 298 328 79 23 chr2 17507040 17507217 -233180637 + MIR SINE MIR 32 218 -44 23 78 0 0 chr2 17507390 17507441 -233180413 + AT_rich Low_complexity Low_complexity 1 51 0 2373 75 0 25 chr2 17507510 17507829 -233180025 - AluY SINE Alu 0 311 1 367 303 133 40 chr2 17507847 17508170 -233179684 - L1ME4a LINE L1 -178 5943 5591 268 258 142 19 chr2 17508283 17508438 -233179416 - L1ME4a LINE L1 -2381 5427 5254 495 183 186 71 chr2 17509791 17510086 -233177768 - L1MC5 LINE L1 -30 7931 7603 257 280 90 20 chr2 17510437 17510537 -233177317 + MIR SINE MIR 156 262 0 420 286 26 7 chr2 17510672 17510826 -233177028 + L1ME LINE L1 5616 5772 -349 22 0 0 0 chr2 17511267 17511289 -233176565 + AT_rich Low_complexity Low_complexity 1 22 0 2139 130 0 7 chr2 17511493 17511792 -233176062 - AluSx SINE Alu -15 297 1 240 283 113 19 chr2 17513881 17514040 -233173814 - L1MC/D LINE L1 -1903 5905 5732 23 33 0 0 chr2 17514271 17514301 -233173553 + AT_rich Low_complexity Low_complexity 1 30 0 1026 183 0 0 chr2 17514342 17514506 -233173348 - AluJ SINE Alu -12 300 137 29 60 0 0 chr2 17514517 17514567 -233173287 + AT_rich Low_complexity Low_complexity 1 50 0 945 128 23 0 chr2 17514567 17514700 -233173154 - AluJ SINE Alu -176 136 1 22 0 0 0 chr2 17515117 17515139 -233172715 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr2 17515556 17515597 -233172257 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 17516072 17516094 -233171760 + AT_rich Low_complexity Low_complexity 1 22 0 219 69 0 0 chr2 17516220 17516249 -233171605 + (TA)n Simple_repeat Simple_repeat 1 29 0 227 121 0 0 chr2 17516769 17516802 -233171052 + L2 LINE L2 3231 3263 -9 27 49 0 0 chr2 17517230 17517271 -233170583 + AT_rich Low_complexity Low_complexity 1 41 0 192 250 77 0 chr2 17517803 17517855 -233169999 - L2 LINE L2 -4 3309 3254 227 278 165 30 chr2 17518237 17518370 -233169484 + L3 LINE CR1 1396 1546 -31 315 299 193 25 chr2 17518948 17519145 -233168709 + MIR SINE MIR 20 249 -13 431 277 186 0 chr2 17519218 17519438 -233168416 - MIR SINE MIR 0 262 2 22 0 0 0 chr2 17519570 17519592 -233168262 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 17520346 17520374 -233167480 + AT_rich Low_complexity Low_complexity 1 28 0 1977 226 153 38 chr2 17520905 17521180 -233166674 + L1MC4 LINE L1 7200 7442 -600 1605 156 85 14 chr2 17521180 17521463 -233166391 + AluSx SINE Alu 5 307 -5 1977 226 153 38 chr2 17521463 17521951 -233165903 + L1MC4 LINE L1 7442 8040 -2 254 289 153 11 chr2 17521965 17522155 -233165699 + HAL1 LINE L1 1475 1691 -816 1621 168 32 7 chr2 17522167 17522452 -233165402 + AluSx SINE Alu 1 292 -20 25 65 0 0 chr2 17522598 17522644 -233165210 + AT_rich Low_complexity Low_complexity 1 46 0 338 272 98 28 chr2 17522768 17523167 -233164687 + L1M4 LINE L1 2271 2703 -3679 271 286 0 10 chr2 17523439 17523537 -233164317 - L1MC4 LINE L1 -1332 6710 6614 227 239 22 43 chr2 17523463 17523555 -233164299 + L1MC4 LINE L1 6614 6703 -1339 * 228 292 0 62 chr2 17523561 17523657 -233164197 + L1MC4 LINE L1 6614 6703 -1339 254 239 22 43 chr2 17523677 17523769 -233164085 + L1MC4 LINE L1 6614 6703 -1339 21 0 0 0 chr2 17523973 17523994 -233163860 + AT_rich Low_complexity Low_complexity 1 21 0 2093 116 3 7 chr2 17524252 17524544 -233163310 - AluSx SINE Alu -21 291 1 2143 92 6 64 chr2 17524927 17525241 -233162613 - AluSq SINE Alu -17 296 1 586 223 63 57 chr2 17528217 17528371 -233159483 + L1M4 LINE L1 4401 4558 -1824 1876 162 10 7 chr2 17528371 17528680 -233159174 - AluSx SINE Alu -2 310 1 586 223 63 57 chr2 17528680 17528700 -233159154 + L1M4 LINE L1 4558 4576 -1806 3441 182 75 15 chr2 17528702 17529917 -233157937 + L1M4 LINE L1 4731 6016 -404 2294 155 3 0 chr2 17530207 17530543 -233157311 + MER1B DNA MER1_type 1 337 0 1863 114 29 39 chr2 17530934 17531242 -233156612 + AluSx SINE Alu 1 305 -7 271 159 0 0 chr2 17531419 17531463 -233156391 - L2 LINE L2 -36 3236 3193 350 253 36 0 chr2 17531864 17531947 -233155907 - MIR SINE MIR -86 122 37 212 235 59 0 chr2 17531975 17532026 -233155828 + L2 LINE L2 2994 3047 -266 370 253 111 0 chr2 17532066 17532165 -233155689 + L2 LINE L2 3166 3275 -38 222 224 20 0 chr2 17532551 17532600 -233155254 - L2 LINE L2 0 3272 3223 405 333 106 40 chr2 17532718 17532972 -233154882 + L2 LINE L2 2979 3254 -18 2062 116 31 0 chr2 17532972 17533264 -233154590 + AluSq SINE Alu 1 301 -12 405 333 106 40 chr2 17533264 17533282 -233154572 + L2 LINE L2 3254 3269 -3 507 248 113 50 chr2 17534781 17534855 -233152999 - MIR SINE MIR -11 251 183 2313 101 0 0 chr2 17534855 17535152 -233152702 + AluSx SINE Alu 1 297 -15 507 248 113 50 chr2 17535152 17535309 -233152545 - MIR SINE MIR -79 183 6 2346 63 0 3 chr2 17535544 17535869 -233151985 + AluSp SINE Alu 1 324 0 650 294 147 27 chr2 17536219 17536872 -233150982 + L2 LINE L2 2580 3313 0 366 331 56 17 chr2 17538460 17538638 -233149216 - MIR SINE MIR -76 186 2 296 278 173 8 chr2 17539152 17539285 -233148569 - MIR SINE MIR -66 196 42 236 233 82 0 chr2 17540650 17540723 -233147131 + L2 LINE L2 3180 3258 -55 290 253 32 21 chr2 17540957 17541052 -233146802 - MER5A DNA MER1_type -5 184 89 219 114 0 0 chr2 17541314 17541349 -233146505 + (T)n Simple_repeat Simple_repeat 1 35 0 197 360 81 0 chr2 17541950 17542036 -233145818 + L2 LINE L2 2978 3070 -202 5192 31 2 25 chr2 17542128 17542733 -233145121 + L1PA5 LINE L1 5562 6152 -2 721 141 82 12 chr2 17542733 17542903 -233144951 - MER33 DNA MER1_type -19 344 163 610 220 35 14 chr2 17542962 17543103 -233144751 - MER33 DNA MER1_type -180 144 1 2225 116 0 3 chr2 17543275 17543577 -233144277 + AluSx SINE Alu 3 303 -9 353 273 10 0 chr2 17544442 17544541 -233143313 + MIR SINE MIR 76 175 -87 231 114 0 0 chr2 17545203 17545238 -233142616 + (GGGGA)n Simple_repeat Simple_repeat 2 36 0 268 282 34 60 chr2 17545836 17545953 -233141901 + MIR SINE MIR 67 180 -82 4486 117 19 56 chr2 17546610 17547327 -233140527 + LTR8 LTR ERV1 1 691 0 225 185 15 185 chr2 17547331 17547391 -233140463 + MER5A DNA MER1_type 76 104 -85 2223 99 0 0 chr2 17547391 17547683 -233140171 - AluSg1 SINE Alu -16 293 2 225 185 15 185 chr2 17547683 17547752 -233140102 + MER5A DNA MER1_type 104 183 -6 209 267 0 0 chr2 17548091 17548136 -233139718 + CT-rich Low_complexity Low_complexity 3 47 0 537 327 52 14 chr2 17548328 17548539 -233139315 - MIR SINE MIR -9 253 35 609 297 104 18 chr2 17548715 17549221 -233138633 - L1ME4a LINE L1 -278 5843 5269 2100 128 3 3 chr2 17550906 17551210 -233136644 - AluSx SINE Alu -8 304 1 419 250 62 44 chr2 17551528 17551688 -233136166 + MIR SINE MIR 79 241 -21 370 274 16 48 chr2 17552018 17552142 -233135712 + MIR SINE MIR 29 148 -114 1887 153 0 52 chr2 17552145 17552472 -233135382 + AluJb SINE Alu 1 310 -2 195 139 0 0 chr2 17552705 17552741 -233135113 + (CA)n Simple_repeat Simple_repeat 2 37 0 713 215 130 35 chr2 17553054 17553254 -233134600 + MIR SINE MIR 12 230 -32 1768 184 81 35 chr2 17553279 17553675 -233134179 + MLT2B1 LTR ERVL 2 415 -105 408 40 0 0 chr2 17553678 17553728 -233134126 + (TCCA)n Simple_repeat Simple_repeat 3 52 0 1717 138 4 54 chr2 17554142 17554440 -233133414 + AluJb SINE Alu 22 305 0 240 167 0 0 chr2 17554674 17554710 -233133144 - MER91 DNA MER1_type 0 140 105 262 333 67 0 chr2 17554754 17554874 -233132980 + L2 LINE L2 3166 3293 -20 197 304 0 0 chr2 17555094 17555150 -233132704 - L2 LINE L2 -208 3064 3009 238 352 89 33 chr2 17555252 17555465 -233132389 + MIR SINE MIR 28 252 -10 21 0 0 0 chr2 17555881 17555902 -233131952 + AT_rich Low_complexity Low_complexity 1 21 0 262 317 49 0 chr2 17555928 17556010 -233131844 - MIR SINE MIR -62 146 61 802 226 6 11 chr2 17556111 17556288 -233131566 - MER97a DNA MER1_type? -717 177 2 2309 100 3 0 chr2 17556457 17556756 -233131098 - AluSc SINE Alu -9 300 1 304 319 64 38 chr2 17556835 17556992 -233130862 - MIR SINE MIR -90 172 12 248 218 323 0 chr2 17557083 17557213 -233130641 + MER91 DNA MER1_type 1 186 -4 304 253 11 42 chr2 17557805 17557900 -233129954 + MIR SINE MIR 19 110 -98 1799 159 54 0 chr2 17558101 17558397 -233129457 + AluSx SINE Alu 1 312 0 234 338 0 0 chr2 17559304 17559384 -233128470 + MIR SINE MIR 63 142 -120 6020 102 6 15 chr2 17559440 17560328 -233127526 + L1PB3 LINE L1 5275 6154 0 235 340 40 10 chr2 17561251 17561351 -233126503 - MIR SINE MIR -81 181 79 289 226 179 12 chr2 17563880 17563964 -233123890 - MIR SINE MIR -83 179 82 492 302 99 36 chr2 17564002 17564508 -233123346 - L1ME LINE L1 -322 5799 5262 2111 97 28 53 chr2 17564549 17564909 -233122945 - L1MA4A LINE L1 0 6303 5953 1220 126 69 0 chr2 17564917 17565092 -233122762 - AluJo SINE Alu -39 273 87 830 80 0 9 chr2 17565092 17565204 -233122650 - L1MA4A LINE L1 -330 5973 5863 876 170 14 0 chr2 17565583 17565724 -233122130 - BC200 scRNA scRNA -56 144 2 1661 183 18 0 chr2 17565993 17566277 -233121577 - AluJb SINE Alu -23 289 1 246 304 174 0 chr2 17567404 17567519 -233120335 + L2 LINE L2 3179 3313 0 2091 142 3 0 chr2 17568100 17568409 -233119445 + AluSx SINE Alu 1 310 -2 2244 93 6 16 chr2 17568622 17568934 -233118920 - AluY SINE Alu -2 309 1 279 54 0 0 chr2 17569557 17569594 -233118260 + (TA)n Simple_repeat Simple_repeat 2 38 0 243 0 0 0 chr2 17569594 17569621 -233118233 + (TG)n Simple_repeat Simple_repeat 1 27 0 1857 161 4 0 chr2 17569621 17569901 -233117953 - AluSx SINE Alu -31 281 1 1539 202 17 0 chr2 17570483 17570770 -233117084 + AluJo SINE Alu 1 292 -20 226 348 11 0 chr2 17571430 17571519 -233116335 + (TG)n Simple_repeat Simple_repeat 2 91 0 314 129 0 16 chr2 17571903 17571965 -233115889 - L1MA4A LINE L1 -295 6008 5948 241 242 0 16 chr2 17572221 17572283 -233115571 - MIR SINE MIR -51 211 151 4657 26 0 0 chr2 17573786 17574315 -233113539 + L1PA5 LINE L1 5626 6154 0 324 0 0 0 chr2 17574315 17574351 -233113503 + (TA)n Simple_repeat Simple_repeat 2 37 0 22 0 0 0 chr2 17575012 17575034 -233112820 + AT_rich Low_complexity Low_complexity 1 22 0 1747 216 43 54 chr2 17575444 17575906 -233111948 - MLT2C2 LTR ERVL -7 457 1 262 140 0 0 chr2 17576042 17576092 -233111762 + Alu SINE Alu 251 300 0 718 122 8 8 chr2 17576714 17576845 -233111009 + (TCCA)n Simple_repeat Simple_repeat 1 131 0 23 0 0 0 chr2 17577123 17577146 -233110708 + AT_rich Low_complexity Low_complexity 1 23 0 6122 125 10 28 chr2 17577166 17577531 -233110323 - L1PB1 LINE L1 0 6867 6497 471 60 0 0 chr2 17577531 17577598 -233110256 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 6122 125 10 28 chr2 17577598 17578514 -233109340 - L1PB1 LINE L1 -370 6497 5614 652 38 0 0 chr2 17578514 17578594 -233109260 + L1PA5 LINE L1 5990 6069 -85 1022 150 22 33 chr2 17578811 17578838 -233109016 - AluJ SINE Alu -12 300 274 2661 104 0 29 chr2 17578838 17579170 -233108684 + THE1B LTR MaLR 1 322 -42 2468 73 0 3 chr2 17579170 17579471 -233108383 - AluY SINE Alu -11 300 1 2661 104 0 29 chr2 17579471 17579513 -233108341 + THE1B LTR MaLR 322 364 0 1022 150 22 33 chr2 17579513 17579665 -233108189 - AluJ SINE Alu -38 274 123 225 0 0 0 chr2 17580049 17580074 -233107780 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2097 132 0 0 chr2 17580325 17580606 -233107248 - AluJb SINE Alu -31 281 1 781 122 17 0 chr2 17580616 17580731 -233107123 - AluJ SINE Alu -182 130 14 1939 145 20 7 chr2 17581673 17581970 -233105884 - AluSx SINE Alu -8 304 4 1281 170 134 48 chr2 17582180 17582516 -233105338 - MLT1A1 LTR MaLR 0 365 1 1742 174 0 17 chr2 17582793 17583091 -233104763 - AluJo SINE Alu -18 294 2 1532 230 8 37 chr2 17583362 17583736 -233104118 + MLT1A1 LTR MaLR 3 365 0 2367 87 67 17 chr2 17583891 17584248 -233103606 - THE1C LTR MaLR 0 375 1 300 241 65 9 chr2 17584847 17584955 -233102899 - MIR SINE MIR -80 182 69 187 269 45 0 chr2 17586315 17586382 -233101472 + MIR SINE MIR 122 191 -71 923 274 150 32 chr2 17587073 17587726 -233100128 + L1MEd LINE L1 496 1225 -4894 396 0 0 0 chr2 17587994 17588038 -233099816 + (TA)n Simple_repeat Simple_repeat 1 44 0 13503 184 81 6 chr2 17588040 17590828 -233097026 - L1PB1 LINE L1 -1241 5621 3043 183 42 0 0 chr2 17590828 17590852 -233097002 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 13503 184 81 6 chr2 17590852 17593290 -233094564 - L1PB1 LINE L1 -3819 3043 6 234 0 0 0 chr2 17593305 17593331 -233094523 + (T)n Simple_repeat Simple_repeat 1 26 0 24 0 0 0 chr2 17594364 17594388 -233093466 + AT_rich Low_complexity Low_complexity 1 24 0 286 354 51 15 chr2 17595095 17595397 -233092457 - L2 LINE L2 -222 3050 2702 1743 160 16 35 chr2 17595399 17595717 -233092137 - AluJo SINE Alu 0 312 1 684 304 44 15 chr2 17596152 17596425 -233091429 - MLT1J LTR MaLR -148 363 83 483 292 0 0 chr2 17596432 17596545 -233091309 + MER81 DNA DNA 2 114 0 2205 119 3 0 chr2 17596855 17597149 -233090705 - AluSx SINE Alu -17 295 1 299 323 91 70 chr2 17597153 17597438 -233090416 - L2 LINE L2 -5 3267 2977 211 244 268 16 chr2 17597934 17598061 -233089793 - MIR3 SINE MIR -5 203 45 2017 164 0 0 chr2 17598094 17598406 -233089448 - AluJb SINE Alu 0 312 1 21 0 0 0 chr2 17601667 17601688 -233086166 + GC_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr2 17601751 17601793 -233086061 + GC_rich Low_complexity Low_complexity 1 42 0 231 88 0 0 chr2 17601844 17601878 -233085976 + (CCCCG)n Simple_repeat Simple_repeat 5 38 0 28 29 0 0 chr2 17601954 17601989 -233085865 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 17603966 17603987 -233083867 + AT_rich Low_complexity Low_complexity 1 21 0 371 270 0 10 chr2 17604254 17604354 -233083500 - MIR SINE MIR -2 260 162 706 231 65 19 chr2 17604736 17604952 -233082902 - MIR SINE MIR -8 254 29 1498 106 0 0 chr2 17606691 17606890 -233080964 + AluSc SINE Alu 86 284 -25 195 42 0 0 chr2 17606895 17606919 -233080935 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 318 252 9 26 chr2 17606924 17607039 -233080815 - MIR SINE MIR -1 261 149 22 0 0 0 chr2 17607040 17607062 -233080792 + AT_rich Low_complexity Low_complexity 1 22 0 560 222 144 0 chr2 17607200 17607380 -233080474 + MIR SINE MIR 47 252 -10 217 280 80 0 chr2 17607842 17607917 -233079937 - L2 LINE L2 -53 3219 3139 2258 104 0 17 chr2 17608153 17608450 -233079404 - AluSx SINE Alu -20 292 1 825 241 35 18 chr2 17608538 17608766 -233079088 - MIR SINE MIR -1 261 30 240 295 265 0 chr2 17609073 17609273 -233078581 - L2 LINE L2 -829 2485 2233 538 273 92 55 chr2 17609355 17609681 -233078173 + MER102b DNA MER1_type 2 339 -2 369 0 0 0 chr2 17609995 17610036 -233077818 + (TG)n Simple_repeat Simple_repeat 2 42 0 516 247 5 76 chr2 17610854 17611077 -233076777 - L2 LINE L2 0 3313 3107 180 0 0 0 chr2 17611108 17611128 -233076726 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 43416 55 1 0 chr2 17611128 17617257 -233070597 - L1PA5 LINE L1 -11 6143 11 696 254 93 18 chr2 17617282 17617637 -233070217 - L2 LINE L2 -243 3070 2684 1568 365 22 20 chr2 17617638 17618128 -233069726 - Charlie4a DNA MER1_type -1 507 17 227 246 193 29 chr2 17619192 17619363 -233068491 - L1ME4a LINE L1 -21 6100 5902 550 323 35 13 chr2 17619424 17619656 -233068198 + MIR SINE MIR 2 238 -24 714 274 103 4 chr2 17619665 17619924 -233067930 - L1MB8 LINE L1 -297 5824 5558 24 0 0 0 chr2 17620795 17620819 -233067035 + AT_rich Low_complexity Low_complexity 1 24 0 1049 200 9 36 chr2 17621422 17621647 -233066207 + MER20 DNA MER1_type 1 219 0 399 291 133 14 chr2 17623193 17623403 -233064451 + MIR SINE MIR 28 262 0 287 122 27 27 chr2 17623996 17624070 -233063784 + GA-rich Low_complexity Low_complexity 3 76 0 270 267 128 0 chr2 17624379 17624465 -233063389 + L2 LINE L2 3168 3264 -8 428 330 59 14 chr2 17625910 17626131 -233061723 + Charlie8 DNA MER1_type 4 234 -2183 699 309 85 65 chr2 17627608 17628442 -233059412 + L1MEd LINE L1 13 863 -5256 1811 169 0 29 chr2 17629469 17629777 -233058077 + AluJo SINE Alu 1 299 -13 274 275 22 22 chr2 17630305 17630396 -233057458 + MLT1K LTR MaLR 190 280 -308 370 270 157 0 chr2 17631978 17632156 -233055698 + MIR SINE MIR 57 262 0 2490 138 16 47 chr2 17633666 17633707 -233054147 + MER57B LTR ERV1 1 42 -392 2204 110 0 0 chr2 17633707 17633998 -233053856 - AluSg SINE Alu -17 293 3 2490 138 16 47 chr2 17633998 17634404 -233053450 + MER57B LTR ERV1 42 434 0 210 295 26 0 chr2 17634674 17634752 -233053102 - MIR SINE MIR -170 92 13 194 308 48 48 chr2 17634780 17634884 -233052970 + L2 LINE L2 3169 3272 0 325 268 79 37 chr2 17634892 17635056 -233052798 - MIR SINE MIR -27 235 65 182 91 30 0 chr2 17635818 17635851 -233052003 + GA-rich Low_complexity Low_complexity 2 35 0 233 167 0 67 chr2 17635861 17635921 -233051933 + (CAGAGA)n Simple_repeat Simple_repeat 6 61 0 670 187 71 33 chr2 17636314 17636496 -233051358 - MER53 DNA DNA 0 189 1 186 133 0 0 chr2 17636541 17636571 -233051283 + (TA)n Simple_repeat Simple_repeat 2 31 0 285 29 0 0 chr2 17636962 17636996 -233050858 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 293 317 33 17 chr2 17637767 17637887 -233049967 + MIR SINE MIR 21 142 -66 2162 124 0 7 chr2 17637893 17638199 -233049655 - AluJo SINE Alu -8 304 1 326 183 28 0 chr2 17638555 17638626 -233049228 + L1ME4a LINE L1 5974 6046 -75 5677 145 21 7 chr2 17640900 17641998 -233045856 - L1PA16 LINE L1 -3 6163 5051 1964 176 29 11 chr2 17642098 17642478 -233045376 - L1PA16 LINE L1 -37 6129 5743 800 255 19 14 chr2 17642605 17642821 -233045033 - MER58B DNA MER1_type -3 338 122 3349 103 10 12 chr2 17642826 17642874 -233044980 - L1PB2 LINE L1 -2 6149 6102 2602 91 10 58 chr2 17642874 17643268 -233044586 + THE1C LTR MaLR 1 375 0 3349 103 10 12 chr2 17643268 17643706 -233044148 - L1PB2 LINE L1 -49 6102 5664 237 274 0 0 chr2 17644348 17644399 -233043455 + polypyrimidine Low_complexity Low_complexity 3 53 0 655 215 11 11 chr2 17644399 17644576 -233043278 + CT-rich Low_complexity Low_complexity 2 178 0 198 0 0 0 chr2 17644578 17644600 -233043254 + (TTTTC)n Simple_repeat Simple_repeat 4 25 0 1752 178 4 0 chr2 17644600 17644875 -233042979 - AluJo SINE Alu -35 277 2 933 226 43 0 chr2 17645186 17645372 -233042482 + MER63A DNA MER1_type 1 194 -16 2270 124 32 5 chr2 17645524 17645904 -233041950 - L1PA16 LINE L1 -9 6157 5768 1637 151 191 38 chr2 17645968 17646360 -233041494 + LTR47A LTR ERVL 1 452 0 415 90 0 45 chr2 17646597 17646664 -233041190 + MLT1A1 LTR MaLR 2 65 -300 2283 112 0 3 chr2 17646687 17646992 -233040862 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr2 17648266 17648286 -233039568 + (ATG)n Simple_repeat Simple_repeat 3 22 0 804 145 0 0 chr2 17648700 17648845 -233039009 + (TGGA)n Simple_repeat Simple_repeat 3 147 0 306 245 10 59 chr2 17650040 17650142 -233037712 + L1MEd LINE L1 485 581 -5538 183 186 47 0 chr2 17650440 17650483 -233037371 + L2 LINE L2 3143 3187 -85 1336 191 135 28 chr2 17652202 17652527 -233035327 - MLT1A1 LTR MaLR 0 365 6 2683 39 0 0 chr2 17652549 17652854 -233035000 - AluY SINE Alu -6 305 1 2360 110 0 0 chr2 17653026 17653335 -233034519 - AluSg SINE Alu -1 309 1 212 302 31 10 chr2 17653690 17653786 -233034068 + L2 LINE L2 3192 3289 -24 972 276 56 43 chr2 17654724 17655170 -233032684 - MLT1J LTR MaLR -59 452 1 233 243 19 87 chr2 17655257 17655360 -233032494 + L2 LINE L2 3146 3241 -31 197 327 127 0 chr2 17655358 17655468 -233032386 - MIR3 SINE MIR -52 156 33 * 1405 256 18 36 chr2 17655961 17656411 -233031443 - LTR53 LTR ERVL 0 519 78 244 154 205 26 chr2 17656474 17656552 -233031302 - MIR SINE MIR -108 154 63 289 310 32 10 chr2 17656598 17656717 -233031137 - MIR SINE MIR -64 144 16 2119 113 3 10 chr2 17657557 17657858 -233029996 + AluSx SINE Alu 1 299 -13 198 71 0 0 chr2 17657912 17657940 -233029914 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 633 209 0 22 chr2 17658887 17659069 -233028785 + CT-rich Low_complexity Low_complexity 1 178 0 190 287 103 35 chr2 17660250 17660337 -233027517 - MIR SINE MIR -97 111 19 196 296 148 9 chr2 17661751 17661859 -233025995 + MIR SINE MIR 66 188 -74 265 268 24 12 chr2 17661866 17661948 -233025906 - L2 LINE L2 0 3272 3190 917 224 108 76 chr2 17662018 17662319 -233025535 - L1MC5 LINE L1 -35 7926 7636 1829 156 167 16 chr2 17662319 17662691 -233025163 - MSTA LTR MaLR 0 428 1 917 224 108 76 chr2 17662691 17663164 -233024690 - L1MC5 LINE L1 -325 7636 7127 26 0 0 0 chr2 17663178 17663204 -233024650 + AT_rich Low_complexity Low_complexity 1 26 0 644 143 0 0 chr2 17663210 17663301 -233024553 - FLAM_C SINE Alu -25 118 28 4759 232 78 28 chr2 17663309 17665902 -233021952 - L1MB8 LINE L1 0 6178 3406 2073 114 14 68 chr2 17665902 17666253 -233021601 + MER4B LTR ERV1 1 332 -278 2198 126 56 8 chr2 17666259 17666617 -233021237 - THE1C LTR MaLR 0 375 1 9124 118 7 50 chr2 17666617 17668255 -233019599 - THE1C-int LTR MaLR 0 1580 8 1979 155 62 6 chr2 17668263 17668617 -233019237 - THE1C LTR MaLR -1 374 1 1751 140 13 35 chr2 17668617 17668925 -233018929 + MER4E LTR ERV1 431 779 0 590 236 56 38 chr2 17668927 17669071 -233018783 - L1MB8 LINE L1 -2739 3407 3267 1724 156 0 18 chr2 17669071 17669354 -233018500 - AluSx SINE Alu -2 310 33 590 236 56 38 chr2 17669354 17669497 -233018357 - L1MB8 LINE L1 -2879 3267 3115 2359 123 103 5 chr2 17670029 17670419 -233017435 - MSTA LTR MaLR 0 428 1 252 301 36 24 chr2 17670593 17670676 -233017178 + MIR SINE MIR 12 95 -167 185 224 17 0 chr2 17674864 17674922 -233012932 + (TAA)n Simple_repeat Simple_repeat 1 59 0 461 239 91 35 chr2 17674933 17675120 -233012734 - MIR SINE MIR -63 145 3 209 139 0 0 chr2 17676260 17676296 -233011558 - L2 LINE L2 -221 3051 3016 280 253 0 13 chr2 17676824 17676899 -233010955 + MER116 DNA Mariner 6 79 -1 2557 136 64 5 chr2 17677709 17678113 -233009741 + MSTA LTR MaLR 1 428 0 325 222 0 48 chr2 17678163 17678330 -233009524 + CT-rich Low_complexity Low_complexity 1 159 0 850 233 45 29 chr2 17678331 17678640 -233009214 - L1MC5 LINE L1 -30 7931 7618 250 365 36 16 chr2 17678832 17679024 -233008830 - L3b LINE CR1 -211 1372 1177 1827 216 92 15 chr2 17679142 17679610 -233008244 - MLT1D LTR MaLR -1 504 1 638 281 106 0 chr2 17679685 17679902 -233007952 + MIR SINE MIR 11 250 -12 225 296 14 92 chr2 17680260 17680286 -233007568 + MIR SINE MIR 22 48 -214 2131 119 3 3 chr2 17680286 17680571 -233007283 - AluSx SINE Alu -27 285 1 225 296 14 92 chr2 17680571 17680686 -233007168 + MIR SINE MIR 48 152 -110 191 307 51 88 chr2 17682353 17682490 -233005364 - L2 LINE L2 -1 3271 3140 515 255 54 13 chr2 17682523 17682672 -233005182 + MIR SINE MIR 20 174 -88 630 202 22 165 chr2 17683390 17683662 -233004192 - MIR SINE MIR -26 236 4 620 239 48 32 chr2 17683968 17684156 -233003698 - LTR40b LTR ERVL 0 462 272 2113 146 0 3 chr2 17684248 17684557 -233003297 + AluSx SINE Alu 1 308 -4 219 36 0 0 chr2 17684809 17684837 -233003017 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 289 318 68 7 chr2 17685670 17685818 -233002036 - MIR SINE MIR -78 184 28 309 247 0 26 chr2 17686296 17686373 -233001481 - L2 LINE L2 -2 3270 3196 722 289 74 25 chr2 17786577 17786930 -232900924 + MLT1K LTR MaLR 217 586 -2 438 159 307 0 chr2 17787172 17787260 -232900594 - FLAM_C SINE Alu -17 126 12 432 143 0 0 chr2 17787336 17787420 -232900434 + (TG)n Simple_repeat Simple_repeat 1 84 0 216 319 0 44 chr2 17787426 17787517 -232900337 + MIR SINE MIR 156 242 -20 189 0 0 0 chr2 17787693 17787714 -232900140 + (TA)n Simple_repeat Simple_repeat 1 21 0 3593 130 19 4 chr2 17787991 17788514 -232899340 + THE1B-int LTR MaLR 1044 1574 -6 2187 137 76 15 chr2 17788519 17788862 -232898992 + THE1B LTR MaLR 1 364 0 200 280 0 0 chr2 17790101 17790151 -232897703 + GA-rich Low_complexity Low_complexity 3 52 0 189 270 0 0 chr2 17790245 17790334 -232897520 + GA-rich Low_complexity Low_complexity 3 91 0 2322 250 53 5 chr2 17790515 17791154 -232896700 - MST-int LTR MaLR -955 696 27 355 287 37 7 chr2 17791151 17791287 -232896567 + THE1-int LTR MaLR 466 605 -975 * 595 253 50 11 chr2 17791291 17791473 -232896381 - MSTA LTR MaLR -162 266 78 568 241 195 29 chr2 17791480 17791721 -232896133 + MST-int LTR MaLR 976 1256 -395 235 111 56 56 chr2 17791709 17791763 -232896091 - MST-int LTR MaLR -616 1035 982 * 305 184 87 78 chr2 17791842 17791945 -232895909 - MSTA LTR MaLR -324 104 1 1319 210 30 42 chr2 17791945 17792278 -232895576 - MSTA-int LTR MaLR 0 1651 1323 315 267 109 0 chr2 17792283 17792384 -232895470 - MSTA LTR MaLR -257 171 60 430 237 21 0 chr2 17792433 17792530 -232895324 - MSTA LTR MaLR -329 99 1 3862 226 70 38 chr2 17792530 17793621 -232894233 - MSTA-int LTR MaLR 0 1651 526 720 127 97 0 chr2 17793724 17793742 -232894112 - L1P LINE L1 -3673 2473 2458 324 0 0 0 chr2 17793742 17793778 -232894076 + (TA)n Simple_repeat Simple_repeat 1 36 0 720 127 97 0 chr2 17793778 17793893 -232893961 - L1P LINE L1 -3688 2458 2327 7131 66 6 7 chr2 17793893 17795295 -232892559 + L1PA7 LINE L1 4743 6150 -4 405 345 31 27 chr2 17795981 17796204 -232891650 - MLT1K LTR MaLR -363 225 2 348 294 161 0 chr2 17796405 17796548 -232891306 + MIR SINE MIR 24 191 -17 408 167 59 78 chr2 17796688 17796790 -232891064 - MLT1D LTR MaLR -151 354 255 2277 148 40 36 chr2 17796836 17797385 -232890469 + MLT2A2 LTR ERVL 1 554 0 1007 180 26 11 chr2 17797406 17797595 -232890259 - MLT1D LTR MaLR -313 192 1 183 358 49 0 chr2 17797916 17797997 -232889857 + MIR3 SINE MIR 105 189 -19 223 255 0 0 chr2 17798168 17798219 -232889635 + CT-rich Low_complexity Low_complexity 1 51 0 1235 131 75 5 chr2 17798592 17798806 -232889048 + L1PB4 LINE L1 5670 5898 -258 243 291 25 13 chr2 17798840 17798919 -232888935 - MIR SINE MIR -112 150 71 306 290 97 51 chr2 17798944 17799120 -232888734 + MIR3 SINE MIR 23 206 -2 214 250 0 0 chr2 17799498 17799542 -232888312 + (CA)n Simple_repeat Simple_repeat 1 44 0 1393 193 163 12 chr2 17799907 17800238 -232887616 - MLT1C LTR MaLR 0 467 87 1461 119 9 5 chr2 17800238 17800448 -232887406 + MSTA LTR MaLR 1 211 -217 1192 187 62 53 chr2 17800860 17801181 -232886673 + MER33 DNA MER1_type 1 324 0 186 241 66 102 chr2 17801584 17801721 -232886133 + L2 LINE L2 2956 3087 -185 565 301 102 0 chr2 17802194 17802305 -232885549 + L1ME4a LINE L1 5522 5620 -501 2420 43 7 4 chr2 17802305 17802586 -232885268 - AluY SINE Alu -3 308 27 565 301 102 0 chr2 17802586 17802730 -232885124 + L1ME4a LINE L1 5620 5803 -318 240 122 0 0 chr2 17802954 17802995 -232884859 + (TA)n Simple_repeat Simple_repeat 1 41 0 300 263 98 8 chr2 17803034 17803167 -232884687 + L1ME4a LINE L1 5966 6110 -11 937 215 11 0 chr2 17803778 17803964 -232883890 + MER5A DNA MER1_type 1 188 -1 225 280 13 27 chr2 17803964 17804034 -232883820 + MIR SINE MIR 76 144 -64 2465 143 60 38 chr2 17804363 17804782 -232883072 + MSTC LTR MaLR 1 428 0 182 389 80 18 chr2 17805020 17805133 -232882721 - L2 LINE L2 -17 3255 3136 1202 281 135 32 chr2 17806176 17806709 -232881145 - MLT2E LTR ERVL -14 614 27 333 273 124 29 chr2 17806711 17806953 -232880901 + HAL1 LINE L1 1213 1477 -1030 273 320 177 31 chr2 17807010 17807304 -232880550 + HAL1 LINE L1 1560 1896 -611 21 57 0 0 chr2 17807628 17807663 -232880191 + AT_rich Low_complexity Low_complexity 1 35 0 810 214 41 38 chr2 17808076 17808343 -232879511 + L1MC4 LINE L1 7775 8042 0 209 257 20 20 chr2 17808530 17808631 -232879223 + (TA)n Simple_repeat Simple_repeat 1 101 0 21593 119 9 13 chr2 17808994 17812266 -232875588 + L1P LINE L1 11 3269 -2877 391 329 66 28 chr2 17813138 17813351 -232874503 - MIR SINE MIR -20 242 22 275 188 12 141 chr2 17813574 17813659 -232874195 + L1MEd LINE L1 4 77 -6042 219 146 0 0 chr2 17813660 17813701 -232874153 + (GA)n Simple_repeat Simple_repeat 2 42 0 348 24 0 0 chr2 17813820 17813841 -232874013 + (CA)n Simple_repeat Simple_repeat 1 62 0 348 24 0 0 chr2 17813841 17813882 -232873972 + (CA)n Simple_repeat Simple_repeat 2 42 0 1851 176 23 38 chr2 17813882 17814229 -232873625 + MER2 DNA MER2_type 3 344 0 2273 105 0 0 chr2 17814460 17814756 -232873098 - AluSx SINE Alu -16 296 1 2138 106 7 20 chr2 17814759 17815061 -232872793 - AluSx SINE Alu -14 298 1 396 0 0 0 chr2 17815581 17815625 -232872229 + (TG)n Simple_repeat Simple_repeat 1 44 0 2117 106 0 3 chr2 17817556 17817840 -232870014 + AluSx SINE Alu 1 283 -29 240 163 0 0 chr2 17817849 17817892 -232869962 + GA-rich Low_complexity Low_complexity 2 44 0 22 56 0 0 chr2 17818427 17818463 -232869391 + AT_rich Low_complexity Low_complexity 1 36 0 216 0 0 0 chr2 17818530 17818554 -232869300 + (A)n Simple_repeat Simple_repeat 1 24 0 213 362 0 32 chr2 17819530 17819624 -232868230 - MIR SINE MIR -152 110 20 565 366 12 12 chr2 17819943 17820194 -232867660 + MIR SINE MIR 11 261 -1 1213 177 13 4 chr2 17821653 17821879 -232865975 + L1MC1 LINE L1 6100 6327 -6 28 0 0 0 chr2 17821897 17821925 -232865929 + AT_rich Low_complexity Low_complexity 1 28 0 183 186 0 0 chr2 17822764 17822807 -232865047 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 209 190 190 52 chr2 17822848 17822906 -232864948 - L2 LINE L2 -7 3265 3200 2072 109 40 3 chr2 17822911 17823240 -232864614 - THE1A LTR MaLR 0 355 15 11769 98 3 0 chr2 17823242 17824817 -232863037 - THE1A-int LTR MaLR 0 1580 1 2243 123 26 9 chr2 17824817 17825166 -232862688 - THE1A LTR MaLR 0 355 1 247 299 28 47 chr2 17825307 17825414 -232862440 - L2 LINE L2 -213 3059 2955 365 316 44 0 chr2 17825488 17825602 -232862252 - MIR SINE MIR -60 148 30 276 260 63 47 chr2 17827103 17827230 -232860624 + MIR SINE MIR 89 217 -45 334 317 81 0 chr2 17828271 17828394 -232859460 + MIR3 SINE MIR 38 170 -38 283 175 48 0 chr2 17828931 17828994 -232858860 + MIR SINE MIR 81 146 -62 637 262 84 5 chr2 17829237 17829428 -232858426 - MIR SINE MIR 0 262 57 272 309 99 31 chr2 17830147 17830309 -232857545 - MIR SINE MIR -56 206 34 279 157 0 0 chr2 17830791 17830842 -232857012 + (TG)n Simple_repeat Simple_repeat 2 52 0 186 333 62 0 chr2 17830880 17830961 -232856893 + L2 LINE L2 3154 3239 -33 1928 148 10 0 chr2 17831452 17831742 -232856112 + AluSx SINE Alu 1 293 -19 183 347 94 41 chr2 17831877 17832047 -232855807 - L2 LINE L2 -210 3062 2884 206 229 43 0 chr2 17832968 17833038 -232854816 + (TA)n Simple_repeat Simple_repeat 2 74 0 502 128 13 0 chr2 17833086 17833164 -232854690 - LTR8 LTR ERV1 0 691 613 11817 77 13 1 chr2 17833968 17835688 -232852166 + L1P LINE L1 3250 4990 -1156 2319 103 18 49 chr2 17836503 17836890 -232850964 - THE1C LTR MaLR 0 375 1 1544 187 19 28 chr2 17837274 17837633 -232850221 - MLT1A1 LTR MaLR 0 365 10 181 270 124 22 chr2 17837833 17837922 -232849932 - MIR3 SINE MIR -100 108 11 281 322 43 9 chr2 17840059 17840174 -232847680 - MIR3 SINE MIR -12 196 78 288 371 112 20 chr2 17840570 17840767 -232847087 + L2 LINE L2 3058 3272 0 219 139 0 0 chr2 17841189 17841225 -232846629 + (A)n Simple_repeat Simple_repeat 1 36 0 490 285 34 39 chr2 17842963 17843170 -232844684 - LTR33 LTR ERVL -308 213 8 325 315 42 24 chr2 17844605 17844770 -232843084 + MIR SINE MIR 47 214 -48 597 319 169 36 chr2 17844941 17845027 -232842827 - L2 LINE L2 -439 2875 2802 2080 119 3 10 chr2 17845027 17845322 -232842532 - AluSx SINE Alu -19 293 1 597 319 169 36 chr2 17845322 17845733 -232842121 - L2 LINE L2 -512 2802 2312 368 250 97 110 chr2 17845893 17846201 -232841653 - MLT1K LTR MaLR -14 574 271 336 244 126 31 chr2 17847740 17847867 -232839987 + L1MC/D LINE L1 5328 5466 -893 21 0 0 0 chr2 17847926 17847947 -232839907 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 17848079 17848114 -232839740 + AT_rich Low_complexity Low_complexity 1 35 0 261 305 38 29 chr2 17848891 17848996 -232838858 + MIR SINE MIR 36 141 -67 1957 102 19 75 chr2 17849008 17849114 -232838740 + L1MA3 LINE L1 5954 6064 -241 2002 108 56 0 chr2 17849114 17849229 -232838625 + AluY SINE Alu 1 108 -203 2198 54 0 4 chr2 17849229 17849487 -232838367 + AluY SINE Alu 48 304 -7 2002 108 56 0 chr2 17849487 17849657 -232838197 + AluY SINE Alu 108 302 -9 1957 102 19 75 chr2 17849657 17849923 -232837931 + L1MA3 LINE L1 6064 6305 0 29 98 0 0 chr2 17850853 17850945 -232836909 + AT_rich Low_complexity Low_complexity 1 92 0 5721 114 13 0 chr2 17851189 17852112 -232835742 - L1PB1 LINE L1 -4 6147 5215 1816 182 3 0 chr2 17852510 17852806 -232835048 + AluJo SINE Alu 1 297 -15 438 288 50 46 chr2 17854026 17854266 -232833588 - MLT1K LTR MaLR -254 334 94 2045 161 33 14 chr2 17854394 17854815 -232833039 + L1MA7 LINE L1 5859 6287 -4 211 267 17 17 chr2 17855227 17855287 -232832567 + L2 LINE L2 2667 2726 -588 230 337 69 10 chr2 17855429 17855530 -232832324 + L2 LINE L2 2965 3071 -201 299 296 121 30 chr2 17855948 17856080 -232831774 + MIR3 SINE MIR 3 146 -62 1314 295 58 66 chr2 17856130 17856907 -232830947 - L3 LINE CR1 0 1577 807 606 331 79 19 chr2 17857269 17857586 -232830268 - L3 LINE CR1 -758 819 484 283 315 26 153 chr2 17857613 17857921 -232829933 - L2 LINE L2 -39 3233 2965 1556 207 7 17 chr2 17860269 17860569 -232827285 - AluJo SINE Alu -15 297 1 187 318 186 34 chr2 17861085 17861472 -232826382 + L2 LINE L2 1981 2426 -888 198 0 0 0 chr2 17861561 17861583 -232826271 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 6905 58 27 5 chr2 17861583 17862540 -232825314 - L1PA6 LINE L1 -11 6143 5178 312 91 0 0 chr2 17862542 17862586 -232825268 + (T)n Simple_repeat Simple_repeat 1 44 0 331 123 82 0 chr2 17862691 17862764 -232825090 + (TATAA)n Simple_repeat Simple_repeat 1 79 0 467 33 33 88 chr2 17862764 17862945 -232824909 + (TA)n Simple_repeat Simple_repeat 2 172 0 212 88 35 70 chr2 17862954 17863011 -232824843 + (TATAG)n Simple_repeat Simple_repeat 1 55 0 344 112 0 96 chr2 17863013 17863210 -232824644 + (TA)n Simple_repeat Simple_repeat 1 178 0 305 99 0 104 chr2 17863249 17863431 -232824423 + (TA)n Simple_repeat Simple_repeat 1 163 0 398 133 49 42 chr2 17863459 17863725 -232824129 + (TA)n Simple_repeat Simple_repeat 1 268 0 209 108 27 0 chr2 17863736 17863773 -232824081 + (CATA)n Simple_repeat Simple_repeat 4 41 0 328 258 94 30 chr2 17864779 17864879 -232822975 + MIR SINE MIR 39 143 -86 240 278 122 42 chr2 17865381 17865523 -232822331 - MIR SINE MIR -69 139 37 26 30 0 0 chr2 17866322 17866355 -232821499 + AT_rich Low_complexity Low_complexity 1 33 0 3572 218 45 18 chr2 17866497 17867315 -232820539 + MER21B LTR ERV1 15 854 -9 294 95 0 0 chr2 17868793 17868835 -232819019 + (TC)n Simple_repeat Simple_repeat 1 42 0 1234 182 33 28 chr2 17869453 17869816 -232818038 + MER31A LTR ERV1 8 485 0 2357 260 106 18 chr2 17870983 17871481 -232816373 - MER69B DNA AcHobo -1300 1226 773 7001 75 10 1 chr2 17871481 17873199 -232814655 - L1PA7 LINE L1 0 6154 4429 2357 260 106 18 chr2 17873199 17873680 -232814174 - MER69B DNA AcHobo -1753 773 152 335 247 87 13 chr2 17873670 17873820 -232814034 + MER69B DNA AcHobo 766 926 -300 * 2265 117 10 0 chr2 17873885 17874194 -232813660 - AluSx SINE Alu 0 312 1 431 271 25 8 chr2 17874200 17874322 -232813532 - MER69B DNA AcHobo -1085 141 18 2143 67 0 11 chr2 17874555 17874824 -232813030 - AluY SINE Alu -18 293 28 181 250 179 45 chr2 17875419 17875531 -232812323 - MIR SINE MIR 0 262 136 529 301 99 38 chr2 17875867 17876262 -232811592 + L1MEd LINE L1 595 1013 -5106 257 61 0 0 chr2 17876485 17876518 -232811336 - U2 snRNA snRNA -155 33 1 806 229 133 9 chr2 17877681 17877899 -232809955 - MIR SINE MIR -10 252 8 410 363 41 24 chr2 17878442 17878737 -232809117 + L2 LINE L2 2456 2755 -559 25 0 0 0 chr2 17878753 17878778 -232809076 + AT_rich Low_complexity Low_complexity 1 25 0 2521 100 17 0 chr2 17878862 17879211 -232808643 - THE1A LTR MaLR 0 355 1 960 227 32 0 chr2 17879517 17879733 -232808121 + MER58A DNA MER1_type 1 223 -1 25932 107 12 35 chr2 17880469 17885448 -232802406 + L1P3 LINE L1 5 4995 -1466 524 259 18 35 chr2 17886096 17886266 -232801588 + MIR3 SINE MIR 18 184 -24 185 171 0 29 chr2 17886419 17886454 -232801400 + L2 LINE L2 3224 3257 -15 2161 115 7 0 chr2 17886520 17886808 -232801046 + AluY SINE Alu 1 290 -21 2656 105 6 0 chr2 17887049 17887410 -232800444 + THE1B LTR MaLR 2 364 0 239 154 31 15 chr2 17887495 17887560 -232800294 + (TA)n Simple_repeat Simple_repeat 1 66 0 21 57 0 0 chr2 17887698 17887733 -232800121 + AT_rich Low_complexity Low_complexity 1 35 0 280 281 49 12 chr2 17888471 17888553 -232799301 - MIR SINE MIR -90 172 88 21 0 0 0 chr2 17889411 17889432 -232798422 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 17890533 17890554 -232797300 + AT_rich Low_complexity Low_complexity 1 21 0 1729 213 43 47 chr2 17890677 17891205 -232796649 + L1MEd LINE L1 1153 1680 -4449 1887 147 55 33 chr2 17891205 17891572 -232796282 + THE1C LTR MaLR 1 375 0 1729 213 43 47 chr2 17891572 17891645 -232796209 + L1MEd LINE L1 1680 1752 -4377 913 231 28 69 chr2 17891662 17891980 -232795874 - MLT1B LTR MaLR -11 379 75 1752 186 30 8 chr2 17891980 17892341 -232795513 - Tigger2 DNA MER2_type -1 2717 2349 1015 190 26 0 chr2 17892340 17892566 -232795288 - Tigger2 DNA MER2_type -2486 232 1 * 365 154 0 15 chr2 17892572 17892637 -232795217 - MLT1B LTR MaLR -310 64 1 837 213 73 47 chr2 17892650 17893035 -232794819 + L1MEd LINE L1 1801 2195 -3934 2302 189 37 9 chr2 17893360 17893820 -232794034 + MLT2B2 LTR ERVL 1 473 -42 3904 147 28 6 chr2 17893820 17894492 -232793362 - HSMAR2 DNA Mariner -1 1301 615 2931 200 196 32 chr2 17894751 17895731 -232792123 + MER52A LTR ERV1 56 1196 -559 397 171 0 0 chr2 17895725 17895795 -232792059 + MER52A LTR ERV1 1686 1755 0 * 3200 130 50 20 chr2 17895796 17896396 -232791458 - HSMAR2 DNA Mariner -683 619 2 378 0 0 0 chr2 17896396 17896438 -232791416 + (TG)n Simple_repeat Simple_repeat 2 43 0 276 361 0 0 chr2 17897075 17897158 -232790696 + MIR SINE MIR 38 120 -88 234 0 0 0 chr2 17897795 17897821 -232790033 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 611 189 0 0 chr2 17897832 17897943 -232789911 - FLAM_C SINE Alu -32 111 1 365 260 5 10 chr2 17898546 17898645 -232789209 - MIR SINE MIR -39 169 66 1454 182 14 47 chr2 17898881 17899178 -232788676 - AluJo SINE Alu -25 287 1 1620 206 4 4 chr2 17899247 17899523 -232788331 + AluJb SINE Alu 3 278 -34 255 61 0 0 chr2 17899523 17899556 -232788298 + (CA)n Simple_repeat Simple_repeat 2 34 0 190 244 259 8 chr2 17899685 17899816 -232788038 + L2 LINE L2 3008 3171 -142 2022 153 66 33 chr2 17899817 17900356 -232787498 + MLT2A2 LTR ERVL 1 554 0 487 258 8 16 chr2 17900358 17900482 -232787372 + L2 LINE L2 3189 3311 -2 629 321 30 28 chr2 17901188 17901514 -232786340 + MLT1G LTR MaLR 1 287 -303 894 147 0 7 chr2 17903420 17903556 -232784298 - AluJo SINE Alu -177 135 1 21 0 0 0 chr2 17903722 17903743 -232784111 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 17905041 17905063 -232782791 + AT_rich Low_complexity Low_complexity 1 22 0 1678 153 7 29 chr2 17905148 17905429 -232782425 + AluSx SINE Alu 1 275 -37 327 282 89 0 chr2 17905499 17905623 -232782231 - L2 LINE L2 0 3272 3138 2168 89 3 14 chr2 17906034 17906325 -232781529 - AluY SINE Alu -23 288 1 279 319 66 60 chr2 17906325 17906507 -232781347 + MER5A DNA MER1_type 1 183 -6 287 353 52 44 chr2 17906360 17906496 -232781358 - MER5B DNA MER1_type -24 154 18 1058 218 62 64 chr2 17907438 17907906 -232779948 - LTR37B LTR ERV1 0 468 2 650 199 37 118 chr2 17908091 17908369 -232779485 - MER31-int LTR ERV1 -881 4055 3841 244 154 31 31 chr2 17908385 17908450 -232779404 + LTR37B LTR ERV1 154 218 -250 2281 171 14 0 chr2 17909686 17910119 -232777735 + L1MB7 LINE L1 5746 6184 0 442 181 67 9 chr2 17910126 17910231 -232777623 + Tigger6 DNA MER2_type 1392 1502 -95 804 160 0 15 chr2 17910589 17910720 -232777134 - FLAM_C SINE Alu -4 129 1 211 226 12 83 chr2 17911635 17911676 -232776178 + GA-rich Low_complexity Low_complexity 2 44 -35 2064 171 34 14 chr2 17911676 17912033 -232775821 - THE1B LTR MaLR 0 364 1 11711 92 4 4 chr2 17912033 17913613 -232774241 - THE1B-int LTR MaLR 0 1580 2 2043 168 34 14 chr2 17913614 17913971 -232773883 - THE1B LTR MaLR 0 364 1 211 226 12 83 chr2 17913971 17914010 -232773844 + GA-rich Low_complexity Low_complexity 42 79 0 36 53 0 0 chr2 17914103 17914160 -232773694 + AT_rich Low_complexity Low_complexity 1 57 0 334 173 49 0 chr2 17914172 17914253 -232773601 + MER61E LTR ERV1 1 85 -484 514 237 60 35 chr2 17914505 17914855 -232772999 + MER52A LTR ERV1 334 1232 -32 1524 150 62 91 chr2 17915106 17915492 -232772362 + THE1C LTR MaLR 1 375 0 651 217 66 50 chr2 17916774 17916972 -232770882 - MER3 DNA MER1_type 0 209 9 2178 182 14 43 chr2 17918225 17918664 -232769190 + MSTB LTR MaLR 1 426 0 494 243 20 64 chr2 17918689 17918891 -232768963 - LTR65 LTR ERV1 -476 193 1 679 300 76 17 chr2 17918923 17919160 -232768694 - MIR SINE MIR -10 252 2 381 109 0 0 chr2 17919424 17919488 -232768366 + (TTTA)n Simple_repeat Simple_repeat 1 64 0 676 133 19 0 chr2 17919488 17919593 -232768261 - AluY SINE Alu -32 279 173 190 278 167 40 chr2 17920985 17921111 -232766743 + MER5B DNA MER1_type 37 178 0 21 36 0 0 chr2 17921533 17921561 -232766293 + AT_rich Low_complexity Low_complexity 1 28 0 235 318 62 40 chr2 17922237 17922511 -232765343 - L1ME LINE L1 -390 5731 5452 229 125 0 0 chr2 17922575 17922615 -232765239 - L1ME LINE L1 -1009 5350 5311 291 98 0 0 chr2 17923452 17923493 -232764361 - MSTA LTR MaLR 0 428 388 2132 124 13 3 chr2 17923493 17923799 -232764055 + AluSg SINE Alu 1 309 -1 555 132 0 0 chr2 17923801 17923892 -232763962 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 2052 140 45 24 chr2 17923907 17924285 -232763569 - MSTA LTR MaLR -42 386 1 1164 265 124 12 chr2 17924452 17924879 -232762975 - MLT1E LTR MaLR -18 575 101 469 324 29 29 chr2 17924973 17925214 -232762640 + L2 LINE L2 3073 3313 0 1827 118 28 42 chr2 17925733 17926020 -232761834 + AluSc SINE Alu 24 306 -3 1781 140 22 11 chr2 17926391 17926669 -232761185 + AluSq SINE Alu 1 281 -32 545 287 54 0 chr2 17927147 17927276 -232760578 + L2 LINE L2 3137 3272 0 188 241 114 13 chr2 17927431 17927510 -232760344 + L2 LINE L2 2926 3012 -260 373 316 63 28 chr2 17927862 17928179 -232759675 - L1ME LINE L1 -350 5820 5493 22 70 0 0 chr2 17928285 17928328 -232759526 + AT_rich Low_complexity Low_complexity 1 43 0 774 259 92 0 chr2 17928601 17928829 -232759025 + MIR SINE MIR 1 249 -13 180 359 23 31 chr2 17928897 17929025 -232758829 + L2 LINE L2 3173 3299 -14 401 340 20 0 chr2 17929799 17929946 -232757908 - LTR16A LTR ERVL -100 350 201 21 0 0 0 chr2 17930208 17930229 -232757625 + AT_rich Low_complexity Low_complexity 1 21 0 2228 118 0 6 chr2 17930368 17930682 -232757172 + AluSx SINE Alu 1 312 0 644 270 118 48 chr2 17930717 17930772 -232757082 + HAL1 LINE L1 1243 1293 -1214 2300 114 0 0 chr2 17930772 17931080 -232756774 + AluSg SINE Alu 1 308 -2 644 270 118 48 chr2 17931080 17931543 -232756311 + HAL1 LINE L1 1293 1797 -710 373 279 66 47 chr2 17931865 17932086 -232755768 + HAL1b LINE L1 746 2378 -129 266 257 92 0 chr2 17932131 17932240 -232755614 + HAL1 LINE L1 2243 2361 -146 237 117 50 0 chr2 17932399 17932459 -232755395 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 213 350 70 20 chr2 17932631 17932731 -232755123 - L2 LINE L2 -11 3261 3157 983 281 56 20 chr2 17933079 17933474 -232754380 - MLT1I LTR MaLR 0 409 1 271 373 57 6 chr2 17935056 17935214 -232752640 + MIR SINE MIR 97 262 0 21 0 0 0 chr2 17935692 17935713 -232752141 + AT_rich Low_complexity Low_complexity 1 21 0 3883 229 25 18 chr2 17935803 17936900 -232750954 - L1PA15 LINE L1 -2129 4017 2914 2189 230 270 58 chr2 17936895 17937039 -232750815 + L1PA15 LINE L1 3986 4098 -2067 * 1813 165 7 0 chr2 17937039 17937312 -232750542 - AluSx SINE Alu -37 275 1 2189 230 270 58 chr2 17937312 17938390 -232749464 + L1PA15 LINE L1 4098 5485 -680 1848 164 19 34 chr2 17938399 17938778 -232749076 - THE1C LTR MaLR -2 373 1 5322 129 66 22 chr2 17938778 17939754 -232748100 - THE1C-int LTR MaLR 0 1580 563 398 143 0 14 chr2 17939854 17939924 -232747930 - THE1C-int LTR MaLR -1509 71 3 2072 143 27 19 chr2 17939928 17940298 -232747556 - THE1C LTR MaLR -2 373 1 4149 130 6 25 chr2 17940298 17940990 -232746864 + L1PA15 LINE L1 5481 6159 -6 22 0 0 0 chr2 17941377 17941399 -232746455 + AT_rich Low_complexity Low_complexity 1 22 0 1742 176 27 45 chr2 17941409 17941824 -232746030 + L1M4 LINE L1 5172 5572 -612 2558 75 0 0 chr2 17941824 17942132 -232745722 + AluY SINE Alu 1 308 -3 1742 176 27 45 chr2 17942132 17942310 -232745544 + L1M4 LINE L1 5572 5752 -432 666 241 47 11 chr2 17942313 17942504 -232745350 + MER3 DNA MER1_type 11 208 -1 344 322 91 83 chr2 17942608 17942981 -232744873 - L2 LINE L2 -3 3269 2894 1997 223 68 38 chr2 17943077 17943713 -232744141 - L1MC4 LINE L1 -605 7437 6783 180 289 92 13 chr2 17946039 17946115 -232741739 + L2 LINE L2 2670 2751 -563 255 95 238 48 chr2 17946291 17946354 -232741500 - MADE1 DNA Mariner -2 78 4 557 116 11 63 chr2 17946903 17947093 -232740761 + (TA)n Simple_repeat Simple_repeat 1 180 0 246 303 148 45 chr2 17948167 17948322 -232739532 + L3 LINE CR1 1274 1444 -133 200 159 0 23 chr2 17948739 17948783 -232739071 + (TA)n Simple_repeat Simple_repeat 2 44 0 1711 196 0 13 chr2 17949143 17949444 -232738410 - AluJo SINE Alu -15 297 1 228 385 11 0 chr2 17951217 17951308 -232736546 - MIR SINE MIR -87 121 30 38 75 0 0 chr2 17953050 17953130 -232734724 + AT_rich Low_complexity Low_complexity 1 80 0 326 213 193 100 chr2 17953847 17954086 -232733768 + L3 LINE CR1 1191 1451 -126 270 328 49 86 chr2 17955483 17955809 -232732045 - L2 LINE L2 -52 3220 2907 249 289 159 50 chr2 17956027 17956266 -232731588 - L2 LINE L2 -739 2575 2311 5008 161 57 20 chr2 17956314 17956398 -232731456 - L1MC1 LINE L1 -11 6322 6243 2201 117 47 33 chr2 17956398 17956757 -232731097 + THE1B LTR MaLR 1 364 0 5008 161 57 20 chr2 17956757 17957769 -232730085 - L1MC1 LINE L1 -90 6243 5186 2383 168 37 63 chr2 17957832 17958433 -232729421 - L1MD3 LINE L1 -8 7987 7403 309 185 46 0 chr2 17958435 17958500 -232729354 - MLT1F1 LTR MaLR -445 122 55 2209 145 80 10 chr2 17958765 17959165 -232728689 + MSTA LTR MaLR 1 428 0 324 379 86 0 chr2 17961759 17961899 -232725955 - L2 LINE L2 -5 3267 3116 217 321 73 9 chr2 17962101 17962210 -232725644 - MIR SINE MIR -122 140 25 300 242 95 0 chr2 17962915 17963010 -232724844 + MIR SINE MIR 76 179 -83 7085 40 24 0 chr2 17963743 17965206 -232722648 + L1PA5 LINE L1 4668 6151 -3 201 417 52 0 chr2 17965265 17965380 -232722474 - L2 LINE L2 -460 2854 2734 623 299 42 17 chr2 17965475 17965716 -232722138 + MIR SINE MIR 12 258 -4 265 429 40 0 chr2 17965864 17965990 -232721864 - L2 LINE L2 -176 3096 2966 2039 130 10 0 chr2 17967569 17967870 -232719984 + AluY SINE Alu 1 304 -7 449 254 129 26 chr2 17967874 17968067 -232719787 + MIR SINE MIR 49 261 -1 323 317 122 44 chr2 17969016 17969287 -232718567 - L2 LINE L2 -63 3209 2918 207 336 58 19 chr2 17969433 17969537 -232718317 - L2 LINE L2 -178 3094 2987 254 287 155 39 chr2 17970204 17970333 -232717521 + L2 LINE L2 3129 3272 0 247 159 130 43 chr2 17970399 17970468 -232717386 - MIR3 SINE MIR -23 185 111 878 222 18 114 chr2 17970594 17970937 -232716917 + L2 LINE L2 3003 3312 -1 1517 138 82 8 chr2 17971060 17971339 -232716515 + MSTA LTR MaLR 113 428 0 280 305 54 29 chr2 17971347 17971586 -232716268 - L1ME LINE L1 -284 5837 5593 403 369 39 39 chr2 17972132 17972441 -232715413 + L2 LINE L2 2534 2842 -472 442 253 0 10 chr2 17972907 17973006 -232714848 + MIR3 SINE MIR 87 184 -24 314 264 23 23 chr2 17973025 17973112 -232714742 - L2 LINE L2 -6 3307 3221 2086 314 121 34 chr2 17973265 17974794 -232713060 - L2 LINE L2 -367 2947 1286 337 344 36 40 chr2 17975584 17975808 -232712046 + L2 LINE L2 2829 3051 -221 183 250 0 0 chr2 17976959 17976991 -232710863 - MIR SINE MIR -144 64 33 221 188 83 0 chr2 17978353 17978401 -232709453 - MER91C DNA MER1_type -53 87 36 330 389 79 26 chr2 17978520 17978911 -232708943 + L2 LINE L2 2065 2476 -838 333 172 104 45 chr2 17979680 17979814 -232708040 - LTR19A LTR ERV1 -3 483 342 227 333 12 12 chr2 17980081 17980162 -232707692 + MIR SINE MIR 9 89 -173 1046 219 30 0 chr2 17980492 17980693 -232707161 - MER63A DNA MER1_type -3 207 1 860 292 109 5 chr2 17980698 17981082 -232706772 - MLT1J2 LTR MaLR -24 426 3 415 290 49 38 chr2 17981082 17981265 -232706589 - MIR SINE MIR -19 243 59 590 283 76 52 chr2 17982685 17982975 -232704879 - MLT1J1 LTR MaLR -107 339 43 578 304 6 0 chr2 17985632 17985790 -232702064 - MIR SINE MIR -34 228 70 217 277 188 0 chr2 17985860 17985961 -232701893 + MIR SINE MIR 132 251 -11 1370 231 101 90 chr2 17986263 17987029 -232700825 + LTR41 LTR ERVL 3 523 0 293 264 42 0 chr2 17988644 17988716 -232699138 - MIR SINE MIR -134 128 54 275 26 51 0 chr2 17989688 17989727 -232698127 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 22 0 0 0 chr2 17990180 17990202 -232697652 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr2 17990763 17990812 -232697042 + AT_rich Low_complexity Low_complexity 1 49 0 2063 108 30 7 chr2 17991009 17991306 -232696548 + AluSg SINE Alu 1 304 -6 450 323 132 25 chr2 17991321 17991640 -232696214 - L1ME4a LINE L1 -237 5884 5532 518 319 90 18 chr2 17992873 17993152 -232694702 + L1MEd LINE L1 938 1236 -4883 237 219 104 10 chr2 17993160 17993256 -232694598 + L1MEd LINE L1 1238 1342 -4787 233 152 22 0 chr2 17993289 17993335 -232694519 + L1 LINE L1 4027 4073 -2073 1214 234 8 14 chr2 17993436 17993799 -232694055 + L1 LINE L1 4299 4659 -1487 * 2812 187 44 16 chr2 17993775 17994443 -232693411 - L1M1 LINE L1 -743 5403 4778 378 0 0 0 chr2 17994443 17994485 -232693369 + (TG)n Simple_repeat Simple_repeat 2 43 0 2812 187 44 16 chr2 17994485 17994585 -232693269 - L1M1 LINE L1 -1368 4778 4682 3977 145 35 4 chr2 17994585 17995307 -232692547 + L1MA4 LINE L1 5557 6300 0 262 119 34 0 chr2 17995312 17995371 -232692483 + L1MB4 LINE L1 6120 6180 0 351 0 0 0 chr2 17995948 17995987 -232691867 + (TA)n Simple_repeat Simple_repeat 2 40 0 392 213 42 75 chr2 17996288 17996584 -232691270 + MLT1H LTR MaLR 216 549 0 38 22 0 0 chr2 17997091 17997136 -232690718 + AT_rich Low_complexity Low_complexity 1 45 0 337 197 53 0 chr2 17997632 17997708 -232690146 - MLT1J2 LTR MaLR -370 80 1 183 80 0 0 chr2 17998222 17998247 -232689607 + (TG)n Simple_repeat Simple_repeat 2 26 0 309 365 47 0 chr2 17998321 17998428 -232689426 - L2 LINE L2 -20 3252 3141 2225 168 5 15 chr2 17998875 17999269 -232688585 - MLT1B LTR MaLR 0 390 1 459 261 103 18 chr2 17999384 17999648 -232688206 - L2 LINE L2 -544 2770 2437 293 266 32 21 chr2 17999658 17999752 -232688102 + MIR SINE MIR 56 150 -112 2459 58 0 26 chr2 18000342 18000650 -232687204 + AluY SINE Alu 1 300 -11 240 295 114 19 chr2 18001958 18002063 -232685791 - MIR SINE MIR -74 134 20 387 83 0 0 chr2 18002514 18002574 -232685280 + (TG)n Simple_repeat Simple_repeat 2 61 0 350 267 93 24 chr2 18002598 18002762 -232685092 - MIR SINE MIR -55 153 22 760 224 59 59 chr2 18003357 18003576 -232684278 + MER20 DNA MER1_type 1 219 0 304 311 98 8 chr2 18005785 18005917 -232681937 + MIR SINE MIR 82 225 -37 241 200 40 0 chr2 18006720 18006770 -232681084 - MIR SINE MIR -80 128 77 260 246 146 36 chr2 18007726 18007836 -232680018 - L2 LINE L2 0 3272 3151 791 241 127 4 chr2 18008507 18008735 -232679119 + MIR SINE MIR 7 262 0 392 285 0 41 chr2 18008961 18009084 -232678770 + MLT1F LTR MaLR 187 304 -286 445 224 6 117 chr2 18009159 18009338 -232678516 + MLT1F LTR MaLR 384 542 0 261 372 43 18 chr2 18010603 18010767 -232677087 + MIR SINE MIR 20 187 -75 2517 92 16 9 chr2 18011307 18011694 -232676160 - L1PA11 LINE L1 -21 6153 5766 355 263 43 50 chr2 18011732 18011916 -232675938 - MIR SINE MIR -46 216 37 319 261 252 8 chr2 18012195 18012314 -232675540 + MIR SINE MIR 50 197 -65 218 386 48 24 chr2 18012337 18012547 -232675307 + L2 LINE L2 3008 3222 -91 262 244 78 44 chr2 18012586 18012676 -232675178 + MER91C DNA MER1_type 48 140 0 193 375 163 12 chr2 18013262 18013422 -232674432 - L2 LINE L2 -1 3271 3088 2036 123 23 0 chr2 18014210 18014511 -232673343 - AluSx SINE Alu -4 308 1 1701 214 19 19 chr2 18015868 18016242 -232671612 + MLT1A2 LTR MaLR 1 374 0 722 205 8 8 chr2 18018017 18018263 -232669591 + CT-rich Low_complexity Low_complexity 1 246 0 258 156 0 0 chr2 18018279 18018324 -232669530 + (CCA)n Simple_repeat Simple_repeat 1 45 0 370 300 53 24 chr2 18019905 18020075 -232667779 - MIR SINE MIR -46 216 42 333 0 0 0 chr2 18020721 18020758 -232667096 + (CA)n Simple_repeat Simple_repeat 1 37 0 32 26 0 0 chr2 18023071 18023110 -232664744 + AT_rich Low_complexity Low_complexity 1 39 0 2068 138 39 30 chr2 18023115 18023476 -232664378 + THE1B LTR MaLR 1 364 0 1565 187 0 26 chr2 18024390 18024700 -232663154 - AluJo SINE Alu -10 302 1 7224 121 29 14 chr2 18024832 18026220 -232661634 + L1P3 LINE L1 12 1428 -4718 647 237 73 6 chr2 18026674 18026851 -232661003 - MER5A DNA MER1_type 0 189 1 8270 157 9 10 chr2 18027089 18028801 -232659053 - L1PA13 LINE L1 -2 6161 4443 2466 11 60 0 chr2 18028801 18029085 -232658769 + AluY SINE Alu 1 301 -10 8270 157 9 10 chr2 18029085 18029693 -232658161 - L1PA13 LINE L1 -1720 4443 3836 323 237 11 21 chr2 18029754 18029847 -232658007 + L2 LINE L2 3222 3313 0 1925 161 6 3 chr2 18031965 18032276 -232655578 - AluSx SINE Alu 0 312 1 27 29 0 0 chr2 18032819 18032853 -232655001 + AT_rich Low_complexity Low_complexity 1 34 0 787 169 58 9 chr2 18033101 18033326 -232654528 - MER113 DNA MER1_type? -278 243 8 367 297 149 7 chr2 18033509 18033657 -232654197 - MIR SINE MIR -44 218 50 224 0 0 61 chr2 18033733 18033766 -232654088 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2698 171 3 91 chr2 18034675 18035282 -232652572 - MLT2B3 LTR ERVL 0 554 1 2097 138 75 0 chr2 18035750 18036126 -232651728 - L1PA16 LINE L1 -4 6162 5759 212 298 0 0 chr2 18036392 18036439 -232651415 - MIR SINE MIR -63 145 99 1205 173 195 12 chr2 18036564 18036887 -232650967 - MLT1B LTR MaLR -1 389 8 297 313 159 30 chr2 18036965 18037198 -232650656 - L2 LINE L2 0 3272 3010 180 111 0 0 chr2 18037724 18037751 -232650103 + (CA)n Simple_repeat Simple_repeat 1 27 0 30 0 0 0 chr2 18037764 18037794 -232650060 + AT_rich Low_complexity Low_complexity 1 30 0 276 200 17 0 chr2 18038034 18038094 -232649760 + L1ME LINE L1 5533 5593 -528 1619 274 97 13 chr2 18038238 18039095 -232648759 - L1MEc LINE L1 -2661 3554 2626 642 316 30 27 chr2 18039163 18039603 -232648251 - L1MEc LINE L1 -5919 477 37 342 286 46 14 chr2 18039609 18039826 -232648028 - L1MCa LINE L1 -3795 2631 2408 229 239 83 83 chr2 18040016 18040234 -232647620 - L1MEd LINE L1 -5109 1010 793 503 316 106 43 chr2 18040557 18041254 -232646600 - L1MEd LINE L1 -5328 791 2 183 42 0 0 chr2 18041667 18041691 -232646163 + (T)n Simple_repeat Simple_repeat 1 24 0 1933 108 11 126 chr2 18041733 18042114 -232645740 - MER1B DNA MER1_type 0 337 1 229 323 8 24 chr2 18042134 18042145 -232645709 + (CATATA)n Simple_repeat Simple_repeat 2 12 -114 905 227 27 32 chr2 18042145 18042365 -232645489 - MER20 DNA MER1_type 0 219 1 229 323 8 24 chr2 18042365 18042480 -232645374 + (CATATA)n Simple_repeat Simple_repeat 12 126 0 502 228 2 23 chr2 18042550 18042683 -232645171 - MIR SINE MIR -71 137 59 725 349 60 17 chr2 18043022 18043450 -232644404 + LTR16A LTR ERVL 4 443 -7 22 56 0 0 chr2 18044463 18044499 -232643355 + AT_rich Low_complexity Low_complexity 1 36 0 428 291 47 17 chr2 18044507 18044741 -232643113 - L1MEc LINE L1 -1888 4327 4087 1224 264 161 14 chr2 18044887 18045407 -232642447 + MLT1E2 LTR MaLR 30 626 0 373 316 64 28 chr2 18045408 18045832 -232642022 - L1MEc LINE L1 -2282 3933 3495 698 200 19 0 chr2 18045905 18046060 -232641794 + L1MB1 LINE L1 6011 6168 0 293 283 117 8 chr2 18046060 18046180 -232641674 - MLT1J LTR MaLR -45 466 334 3879 207 113 126 chr2 18046180 18046668 -232641186 - L1MCa LINE L1 -4213 2213 1721 2344 77 0 7 chr2 18046668 18046968 -232640886 + AluY SINE Alu 1 298 -13 3879 207 113 126 chr2 18046968 18047562 -232640292 - L1MCa LINE L1 -4705 1721 1121 8010 125 11 28 chr2 18047562 18048884 -232638970 - HSMAR2 DNA Mariner -1 1301 2 3879 207 113 126 chr2 18048884 18050021 -232637833 - L1MCa LINE L1 -5305 1121 20 1810 261 55 17 chr2 18050025 18050895 -232636959 - L1MEc LINE L1 -4079 2317 1415 453 204 0 0 chr2 18050895 18050983 -232636871 - MER47B DNA MER2_type 0 418 331 947 249 0 0 chr2 18050984 18051193 -232636661 + MER2 DNA MER2_type 2 210 -135 1380 226 20 10 chr2 18051287 18051593 -232636261 - MER47B DNA MER2_type -103 315 7 693 189 20 0 chr2 18053178 18053326 -232634528 - L1MA10 LINE L1 -9 6325 6175 222 156 0 0 chr2 18053537 18053582 -232634272 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 181 339 81 0 chr2 18054477 18054539 -232633315 - L2 LINE L2 -38 3234 3168 201 197 0 0 chr2 18054800 18054861 -232632993 + A-rich Low_complexity Low_complexity 1 61 0 1153 282 56 13 chr2 18055494 18056043 -232631811 + L1MCa LINE L1 1493 2255 -4352 1713 205 5 30 chr2 18056049 18056419 -232631435 - MLT1A1 LTR MaLR -4 361 1 329 91 0 0 chr2 18056906 18056961 -232630893 - L1MA4A LINE L1 -1 6302 6248 1282 159 8 4 chr2 18056968 18057207 -232630647 + LTR1 LTR ERV1 12 251 -534 * 2505 132 63 89 chr2 18057188 18057803 -232630051 + LTR1 LTR ERV1 187 785 0 1373 156 30 7 chr2 18057803 18058073 -232629781 - L1MA4A LINE L1 -46 6257 5982 206 310 23 69 chr2 18058953 18059040 -232628814 - L2 LINE L2 -33 3280 3198 368 325 65 46 chr2 18059850 18060219 -232627635 + L2 LINE L2 2511 2886 -428 305 371 40 0 chr2 18060461 18060585 -232627269 + MIR SINE MIR 108 236 -26 229 293 37 0 chr2 18060677 18060759 -232627095 + L2 LINE L2 3229 3313 0 186 43 0 0 chr2 18060849 18060872 -232626982 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 462 279 8 8 chr2 18061619 18061741 -232626113 - MIR SINE MIR -126 136 15 2196 130 0 0 chr2 18063145 18063438 -232624416 + AluSx SINE Alu 1 293 -19 189 0 0 0 chr2 18063453 18063474 -232624380 + (GA)n Simple_repeat Simple_repeat 2 22 0 469 310 35 23 chr2 18063509 18063680 -232624174 - MIR SINE MIR -70 192 20 586 302 36 9 chr2 18064650 18064872 -232622982 + MIR SINE MIR 21 248 -14 205 256 22 139 chr2 18064921 18065058 -232622796 + L2 LINE L2 2976 3096 -176 219 254 227 9 chr2 18065070 18065180 -232622674 - L2 LINE L2 0 3272 3139 272 213 9 65 chr2 18065276 18065384 -232622470 + T-rich Low_complexity Low_complexity 4 105 0 201 147 0 0 chr2 18065400 18065434 -232622420 + (TC)n Simple_repeat Simple_repeat 1 34 0 228 333 0 24 chr2 18065466 18065550 -232622304 - L2 LINE L2 -219 3053 2972 257 321 86 68 chr2 18065576 18065971 -232621883 - L2 LINE L2 -353 2961 2560 1686 300 173 15 chr2 18066248 18067243 -232620611 - L2 LINE L2 -175 3138 1985 434 236 16 47 chr2 18068300 18068427 -232619427 + LTR67 LTR ERVL 405 527 -30 334 301 11 0 chr2 18068596 18068689 -232619165 + L1MC4 LINE L1 6631 6724 -1318 230 271 45 77 chr2 18069001 18069116 -232618738 + HAL1b LINE L1 431 541 -807 2305 103 0 0 chr2 18069116 18069416 -232618438 - AluSx SINE Alu -12 300 1 230 271 45 77 chr2 18069416 18069455 -232618399 + HAL1b LINE L1 541 580 -768 434 258 58 53 chr2 18069686 18070016 -232617838 + L1M4 LINE L1 4103 4437 -1709 900 106 8 0 chr2 18070016 18070148 -232617706 + L1PA7 LINE L1 6019 6151 -3 434 258 58 53 chr2 18070148 18070197 -232617657 + L1M4 LINE L1 4437 4484 -1662 282 373 180 8 chr2 18070339 18070583 -232617271 + L2 LINE L2 2967 3252 -20 2676 97 23 0 chr2 18070930 18071321 -232616533 + L1PA13 LINE L1 5764 6163 0 597 134 0 0 chr2 18071663 18071760 -232616094 - L1PB1 LINE L1 -8 6143 6047 384 298 149 6 chr2 18072098 18072279 -232615575 + MIR SINE MIR 56 262 0 434 218 10 59 chr2 18072402 18072503 -232615351 + L2 LINE L2 3194 3289 -24 1809 240 96 1 chr2 18072807 18073495 -232614359 + L1M4 LINE L1 2282 3034 -3112 407 271 48 60 chr2 18073487 18073756 -232614098 - L1MC4a LINE L1 -1655 6153 5888 * 200 29 114 0 chr2 18074555 18074590 -232613264 + (TTAAA)n Simple_repeat Simple_repeat 2 40 0 491 267 102 26 chr2 18074692 18074933 -232612921 + MIR SINE MIR 3 262 0 221 329 95 37 chr2 18075144 18075439 -232612415 + L2 LINE L2 1908 2219 -1095 591 309 64 27 chr2 18075442 18075630 -232612224 + MER91A DNA MER1_type 1 195 -1 229 325 102 37 chr2 18075685 18075931 -232611923 + L2 LINE L2 2249 2510 -804 739 277 146 9 chr2 18075943 18076286 -232611568 + LTR16A LTR ERVL 18 407 -43 595 347 60 24 chr2 18076934 18077317 -232610537 - L1MDa LINE L1 -2206 4334 3938 418 134 0 0 chr2 18077479 18077546 -232610308 + L1PA11 LINE L1 6096 6162 -12 3045 64 5 0 chr2 18077549 18077940 -232609914 + L1PA5 LINE L1 5762 6154 0 385 290 83 19 chr2 18078084 18078498 -232609356 - L1MDa LINE L1 -2897 3643 3175 4138 80 11 0 chr2 18078498 18079045 -232608809 - MER41A LTR ERV1 0 554 2 385 290 83 19 chr2 18079045 18079260 -232608594 - L1MDa LINE L1 -3365 3175 2975 3989 128 44 19 chr2 18079404 18080153 -232607701 - Tigger3(Golem) DNA MER2_type -1 3028 2261 347 200 15 0 chr2 18080155 18080220 -232607634 - Tigger3(Golem) DNA MER2_type -2949 80 15 416 233 79 73 chr2 18080311 18080582 -232607272 - L1MDa LINE L1 -3829 2724 2453 200 347 0 0 chr2 18081186 18081235 -232606619 + L2 LINE L2 3242 3290 -23 254 364 102 0 chr2 18081295 18081413 -232606441 + MIR SINE MIR 18 147 -61 210 91 0 0 chr2 18081455 18081488 -232606366 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 306 329 49 53 chr2 18082779 18083004 -232604850 - L1MC4a LINE L1 -1882 5926 5703 21 0 0 0 chr2 18083134 18083155 -232604699 + AT_rich Low_complexity Low_complexity 1 21 0 382 337 35 43 chr2 18083359 18083614 -232604240 + MIR SINE MIR 4 256 -6 231 114 0 0 chr2 18083614 18083649 -232604205 + (CAT)n Simple_repeat Simple_repeat 2 36 0 488 308 102 84 chr2 18086736 18087070 -232600784 - L2 LINE L2 -1 3271 2932 187 375 0 0 chr2 18087259 18087307 -232600547 - L2 LINE L2 -24 3289 3242 751 298 52 22 chr2 18088041 18088403 -232599451 + L1MEc LINE L1 27 399 -5997 575 203 68 17 chr2 18088409 18088586 -232599268 + L1MB5 LINE L1 5140 5325 -821 2387 186 10 0 chr2 18088591 18089091 -232598763 - L1P LINE L1 -869 5277 4773 2917 188 32 140 chr2 18089394 18090448 -232597406 + MER52A LTR ERV1 379 1303 -452 1697 197 0 3 chr2 18090451 18090745 -232597109 + AluJo SINE Alu 1 293 -19 580 253 49 8 chr2 18090748 18091037 -232596817 - MLT1E-int LTR MaLR -920 451 1 1868 244 69 52 chr2 18091040 18091619 -232596235 - MLT1E LTR MaLR -3 590 2 446 246 106 0 chr2 18091624 18091766 -232596088 + MIR SINE MIR 50 206 -56 1811 194 59 14 chr2 18092068 18092506 -232595348 + L1MB5 LINE L1 5717 6174 0 396 330 55 61 chr2 18093107 18093582 -232594272 + MLT1K LTR MaLR 92 563 -25 385 261 15 8 chr2 18093698 18093832 -232594022 + (CTA)n Simple_repeat Simple_repeat 1 135 0 246 62 0 0 chr2 18097404 18097436 -232590418 + (CA)n Simple_repeat Simple_repeat 1 32 0 369 269 147 61 chr2 18097904 18098250 -232589604 + L2 LINE L2 2031 2406 -908 404 293 24 24 chr2 18098902 18099025 -232588829 - L2 LINE L2 -1 3271 3149 464 335 126 5 chr2 18099157 18099363 -232588491 - MIR SINE MIR -29 233 3 1834 87 0 0 chr2 18099458 18099687 -232588167 + AluSg SINE Alu 1 229 -81 353 274 189 13 chr2 18100510 18100663 -232587191 - MIR SINE MIR -59 203 24 30 27 0 0 chr2 18101118 18101155 -232586699 + AT_rich Low_complexity Low_complexity 1 37 0 2634 33 3 0 chr2 18101206 18101511 -232586343 - AluY SINE Alu -5 306 1 332 279 29 19 chr2 18101956 18102060 -232585794 + MIR SINE MIR 124 228 -34 183 269 86 43 chr2 18102332 18102425 -232585429 + MIR SINE MIR 47 143 -119 33 73 0 0 chr2 18102535 18102603 -232585251 + AT_rich Low_complexity Low_complexity 1 68 0 381 279 103 7 chr2 18103737 18103873 -232583981 - MLT1J2 LTR MaLR -21 429 281 237 230 97 44 chr2 18103984 18104097 -232583757 - MLT1J1 LTR MaLR -323 123 5 1947 244 64 43 chr2 18104420 18105001 -232582853 - MLT1E LTR MaLR 0 593 1 235 275 33 11 chr2 18105264 18105355 -232582499 + MIR3 SINE MIR 74 166 -42 1084 235 155 13 chr2 18106542 18106830 -232581024 - MLT1D LTR MaLR 0 505 151 504 79 13 13 chr2 18106830 18106906 -232580948 + MADE1 DNA Mariner 1 76 -4 1084 235 155 13 chr2 18106906 18106991 -232580863 - MLT1D LTR MaLR -354 151 79 181 327 0 0 chr2 18107116 18107168 -232580686 - L2 LINE L2 -2 3270 3219 3831 150 37 23 chr2 18107172 18107873 -232579981 + MER50 LTR ERV1 1 711 -23 1143 318 52 33 chr2 18108506 18109312 -232578542 + L2 LINE L2 2489 3313 0 955 186 0 30 chr2 18109344 18109511 -232578343 - AluJo SINE Alu -26 286 125 285 128 0 0 chr2 18109511 18109558 -232578296 + (TA)n Simple_repeat Simple_repeat 2 48 0 701 189 8 8 chr2 18109558 18109685 -232578169 - AluJo SINE Alu -183 129 3 362 245 107 60 chr2 18110449 18110747 -232577107 - L1ME4a LINE L1 -224 5897 5586 25 95 0 0 chr2 18111023 18111097 -232576757 + AT_rich Low_complexity Low_complexity 1 74 0 21 36 0 0 chr2 18111288 18111316 -232576538 + AT_rich Low_complexity Low_complexity 1 28 0 446 326 71 55 chr2 18111316 18111751 -232576103 - L1MC/D LINE L1 -2046 5762 5321 254 382 61 0 chr2 18112012 18112143 -232575711 - L2 LINE L2 -459 2855 2717 1361 191 127 0 chr2 18114226 18114478 -232573376 - AluJb SINE Alu -17 285 2 731 246 107 9 chr2 18114481 18114783 -232573071 - MER57A LTR ERV1 -21 382 27 1367 221 39 22 chr2 18114814 18115171 -232572683 + MLT1A1 LTR MaLR 1 363 -2 232 217 17 75 chr2 18115193 18115313 -232572541 - MER104 DNA Tc2 -64 116 4 234 383 25 0 chr2 18115316 18115397 -232572457 - MIR SINE MIR -156 106 24 202 328 125 16 chr2 18116239 18116367 -232571487 + MIR3 SINE MIR 60 201 -7 216 316 22 73 chr2 18118194 18118330 -232569524 - L2 LINE L2 -3 3310 3182 566 345 98 24 chr2 18119332 18120117 -232567737 + L1MC4a LINE L1 4987 5756 -365 262 221 0 47 chr2 18120191 18120277 -232567577 + L1ME4a LINE L1 5935 6016 -105 30 69 0 0 chr2 18120296 18120354 -232567500 + AT_rich Low_complexity Low_complexity 1 58 0 197 208 0 19 chr2 18120430 18120483 -232567371 + GA-rich Low_complexity Low_complexity 1 52 0 1420 233 73 35 chr2 18120542 18121005 -232566849 - MER74B LTR ERVL -59 563 83 1844 128 0 28 chr2 18123171 18123460 -232564394 - L1PA16 LINE L1 -305 5861 5581 * 2999 178 21 4 chr2 18123458 18124330 -232563524 + L1PA16 LINE L1 4721 5603 -563 1744 188 6 3 chr2 18124322 18124651 -232563203 - L1MB1 LINE L1 -239 5950 5621 * 1111 157 26 0 chr2 18124651 18124836 -232563018 + L1MA10 LINE L1 6128 6323 -11 928 214 63 0 chr2 18124839 18125045 -232562809 - Charlie4 DNA MER1_type -1726 235 17 367 319 34 8 chr2 18125672 18125791 -232562063 + L2 LINE L2 3146 3267 -5 582 257 46 0 chr2 18125917 18126069 -232561785 + MIR SINE MIR 84 242 -20 1293 197 10 38 chr2 18126614 18126903 -232560951 + AluJo SINE Alu 1 281 -31 186 103 0 0 chr2 18126907 18126936 -232560918 + (TTG)n Simple_repeat Simple_repeat 2 30 0 248 328 32 64 chr2 18127950 18128075 -232559779 + MIR SINE MIR 3 124 -84 1154 262 38 65 chr2 18128075 18128552 -232559302 + LTR16B LTR ERVL 1 464 0 326 269 87 111 chr2 18128571 18128987 -232558867 + MLT1K LTR MaLR 16 421 -167 581 285 128 21 chr2 18132349 18132683 -232555171 - MLT1I LTR MaLR -19 390 15 255 276 0 23 chr2 18133613 18133700 -232554154 - MLT1I LTR MaLR -15 394 310 181 211 308 0 chr2 18133852 18133904 -232553950 - MIR SINE MIR -147 115 48 358 327 200 0 chr2 18134011 18134161 -232553693 - MER5A DNA MER1_type -1 188 9 21 0 0 0 chr2 18134285 18134306 -232553548 + AT_rich Low_complexity Low_complexity 1 21 0 24533 84 6 7 chr2 18134616 18138804 -232549050 - L1PA7 LINE L1 -1 6153 1970 801 203 98 19 chr2 18188804 18189129 -232498725 - MLT1E3 LTR MaLR -220 404 93 306 370 42 16 chr2 18189663 18189852 -232498002 + MIR SINE MIR 19 212 -50 472 270 17 35 chr2 18189909 18190083 -232497771 + MLT1H LTR MaLR 73 243 -306 2037 128 44 33 chr2 18190411 18190771 -232497083 - THE1B LTR MaLR 0 364 1 240 349 0 28 chr2 18191299 18191408 -232496446 + MIR SINE MIR 111 216 -46 496 265 153 0 chr2 18192464 18192653 -232495201 + MIR SINE MIR 30 247 -15 437 328 113 28 chr2 18193406 18193583 -232494271 + L2 LINE L2 3080 3271 -1 199 333 13 0 chr2 18193862 18193937 -232493917 + L2 LINE L2 2335 2410 -904 1511 274 113 29 chr2 18194334 18194741 -232493113 - L1MC4 LINE L1 -51 7991 7620 1946 144 34 7 chr2 18194741 18195033 -232492821 - AluJb SINE Alu -12 300 1 1511 274 113 29 chr2 18195033 18195787 -232492067 - L1MC4 LINE L1 -422 7620 6629 393 22 0 0 chr2 18195787 18195833 -232492021 + (CA)n Simple_repeat Simple_repeat 2 47 0 1511 274 113 29 chr2 18195833 18195918 -232491936 - L1MC4 LINE L1 -1413 6629 6553 186 111 56 0 chr2 18196405 18196441 -232491413 + L2 LINE L2 3234 3271 -1 311 305 182 5 chr2 18196614 18196801 -232491053 - MIR SINE MIR -11 251 32 2323 88 3 7 chr2 18197072 18197369 -232490485 + AluSx SINE Alu 1 296 -16 440 254 167 0 chr2 18197388 18197502 -232490352 - MIR3 SINE MIR -73 135 3 211 214 60 107 chr2 18197562 18197646 -232490208 - L2 LINE L2 -5 3308 3229 368 171 114 86 chr2 18198902 18199042 -232488812 - MIR SINE MIR -65 197 54 244 320 40 0 chr2 18200122 18200197 -232487657 + L2 LINE L2 3186 3263 -9 1605 307 95 40 chr2 18200241 18201137 -232486717 + L2 LINE L2 1925 2869 -445 784 130 29 120 chr2 18201613 18201821 -232486033 + MER53 DNA DNA 1 189 0 300 180 0 16 chr2 18202183 18202244 -232485610 - L1ME4a LINE L1 -4 6117 6058 274 216 49 39 chr2 18203790 18203892 -232483962 - MER69 DNA AcHobo -42 2484 2382 2077 171 18 5 chr2 18204294 18204674 -232483180 + MLT1B LTR MaLR 6 390 0 315 367 57 19 chr2 18205280 18205438 -232482416 + L2 LINE L2 3081 3244 -28 389 323 37 43 chr2 18205549 18205710 -232482144 - L2 LINE L2 -2 3270 3111 2742 158 8 11 chr2 18205866 18206334 -232481520 - MLT1C LTR MaLR 0 467 1 260 398 0 16 chr2 18206797 18206925 -232480929 + MER115 DNA AcHobo 158 283 -410 1587 220 40 118 chr2 18207237 18207838 -232480016 + MLT2B3 LTR ERVL 1 554 0 304 352 44 31 chr2 18208243 18208402 -232479452 + MER5A DNA MER1_type 29 189 0 1473 81 0 24 chr2 18208405 18208614 -232479240 - L1PA11 LINE L1 -2 6172 5969 1024 138 64 0 chr2 18208927 18209145 -232478709 + L1MA8 LINE L1 6057 6288 -3 551 230 81 6 chr2 18209589 18209750 -232478104 + MLT1B LTR MaLR 3 175 -215 9881 30 1 1 chr2 18209792 18211742 -232476112 - L1PA4 LINE L1 -8 6147 4197 880 210 20 0 chr2 18211816 18212011 -232475843 + MLT1B LTR MaLR 192 390 0 1149 232 16 0 chr2 18212094 18212340 -232475514 - MLT1E1 LTR MaLR 0 654 405 552 192 53 34 chr2 18212385 18212587 -232475267 - MLT1E1 LTR MaLR -394 260 1 407 344 75 0 chr2 18213304 18213464 -232474390 + L2 LINE L2 3100 3271 -1 2537 50 0 7 chr2 18214045 18214342 -232473512 - AluY SINE Alu -14 297 3 356 324 110 40 chr2 18215124 18215297 -232472557 - MIR3 SINE MIR -21 187 3 218 234 340 0 chr2 18215771 18215865 -232471989 - L2 LINE L2 -2 3270 3145 599 300 39 26 chr2 18216710 18216940 -232470914 - MIR SINE MIR -23 239 7 26 0 0 0 chr2 18216975 18217001 -232470853 + AT_rich Low_complexity Low_complexity 1 26 0 239 323 0 0 chr2 18217126 18217188 -232470666 + L3 LINE CR1 1511 1572 -5 421 288 14 7 chr2 18217362 18217498 -232470356 + MIR SINE MIR 31 144 -64 450 329 96 12 chr2 18217736 18217903 -232469951 - MIR3 SINE MIR -11 197 17 406 253 163 12 chr2 18218119 18218285 -232469569 + MIR SINE MIR 71 261 -1 686 176 8 8 chr2 18218886 18219046 -232468808 + AluJb SINE Alu 160 319 0 221 290 16 0 chr2 18219820 18219882 -232467972 + GA-rich Low_complexity Low_complexity 4 66 0 1797 173 84 11 chr2 18220671 18221040 -232466814 + MSTD LTR MaLR 1 396 0 283 328 86 8 chr2 18221169 18221297 -232466557 - L2 LINE L2 -3 3310 3173 312 354 42 14 chr2 18221306 18221450 -232466404 + MIR SINE MIR 45 192 -70 210 289 0 0 chr2 18221551 18221596 -232466258 + MIR SINE MIR 51 95 -167 383 83 17 0 chr2 18221620 18221680 -232466174 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 902 225 20 10 chr2 18221743 18221943 -232465911 - MER58A DNA MER1_type -18 206 5 185 284 23 34 chr2 18221961 18222049 -232465805 - L2 LINE L2 -86 3227 3141 23 33 0 0 chr2 18223032 18223062 -232464792 + AT_rich Low_complexity Low_complexity 1 30 0 189 175 0 0 chr2 18223084 18223124 -232464730 + (TA)n Simple_repeat Simple_repeat 1 40 0 478 287 25 13 chr2 18223142 18223299 -232464555 - MIR SINE MIR -72 190 32 2276 127 0 6 chr2 18223370 18223724 -232464130 - L1PB1 LINE L1 -1 6150 5799 847 245 148 30 chr2 18224347 18224779 -232463075 + L2 LINE L2 2831 3313 0 402 356 91 68 chr2 18225069 18225510 -232462344 - L2 LINE L2 0 3272 2822 2329 118 19 22 chr2 18225610 18225975 -232461879 + THE1B LTR MaLR 1 364 0 3925 84 61 77 chr2 18225975 18226667 -232461187 + THE1B-int LTR MaLR 1 681 -899 * 4299 131 35 6 chr2 18226664 18228058 -232459796 - L1PA11 LINE L1 -256 5918 4495 1148 141 4 70 chr2 18228090 18228207 -232459647 - L1PA12 LINE L1 -1547 6037 5945 2364 87 3 19 chr2 18228207 18228517 -232459337 - AluSg SINE Alu -5 305 1 1148 141 4 70 chr2 18228517 18228655 -232459199 - L1PA12 LINE L1 -1639 5945 5799 732 23 0 0 chr2 18228757 18228843 -232459011 + (TA)n Simple_repeat Simple_repeat 2 87 0 9154 203 14 16 chr2 18228857 18231060 -232456794 - L1PA12 LINE L1 -2763 4821 2622 2092 147 61 33 chr2 18231061 18231577 -232456277 + MLT2A2 LTR ERVL 1 554 0 6971 217 21 31 chr2 18231579 18231747 -232456107 - L1PA12 LINE L1 -4952 2632 2464 2488 54 0 7 chr2 18231747 18232045 -232455809 - AluY SINE Alu -15 296 1 6971 217 21 31 chr2 18232045 18233739 -232454115 - L1PA12 LINE L1 -5120 2464 1 492 242 42 81 chr2 18234876 18235161 -232452693 + L1M4 LINE L1 1525 1798 -4586 881 246 187 13 chr2 18235244 18235769 -232452085 + L1M4 LINE L1 2473 3088 -3294 195 161 32 32 chr2 18235774 18235836 -232452018 + GA-rich Low_complexity Low_complexity 3 64 0 681 235 85 54 chr2 18235837 18236190 -232451664 + L1M4 LINE L1 4929 5292 -1090 237 306 28 0 chr2 18236226 18236298 -232451556 - L2 LINE L2 -688 2626 2553 453 227 9 27 chr2 18236586 18236696 -232451158 + MIR SINE MIR 113 220 -42 972 163 0 7 chr2 18237276 18237429 -232450425 - FRAM SINE Alu -30 146 1 368 339 70 0 chr2 18238028 18238199 -232449655 - MIR SINE MIR -75 187 5 2394 80 0 3 chr2 18238910 18239212 -232448642 + AluY SINE Alu 1 301 -10 233 329 110 97 chr2 18239230 18239458 -232448396 - L2 LINE L2 -4 3268 3038 420 176 0 0 chr2 18239594 18239662 -232448192 + MIR SINE MIR 84 151 -111 246 231 96 96 chr2 18240126 18240230 -232447624 + MIR SINE MIR 138 241 -21 267 276 0 0 chr2 18242178 18242254 -232445600 + (TA)n Simple_repeat Simple_repeat 2 77 0 213 211 0 35 chr2 18243106 18243163 -232444691 + A-rich Low_complexity Low_complexity 6 60 0 266 253 67 27 chr2 18243297 18243372 -232444482 - L2 LINE L2 -8 3264 3187 422 271 46 20 chr2 18244273 18244424 -232443430 + MIR3 SINE MIR 30 184 -24 231 309 40 59 chr2 18245355 18245507 -232442347 + L2 LINE L2 3165 3313 0 183 184 0 0 chr2 18246051 18246089 -232441765 + (TG)n Simple_repeat Simple_repeat 1 38 0 2204 82 0 3 chr2 18246296 18246610 -232441244 + AluSg SINE Alu 1 313 0 28 0 0 0 chr2 18247249 18247277 -232440577 + AT_rich Low_complexity Low_complexity 1 28 0 206 382 53 0 chr2 18247635 18247711 -232440143 + L2 LINE L2 3132 3211 -61 431 325 133 21 chr2 18247890 18248124 -232439730 - MIR SINE MIR 0 262 3 314 257 0 14 chr2 18248936 18249006 -232438848 + MIR3 SINE MIR 117 185 -23 452 255 0 0 chr2 18249091 18249197 -232438657 + MIR SINE MIR 49 154 -108 1604 240 21 30 chr2 18249359 18249830 -232438024 - MLT1C LTR MaLR 0 467 1 237 196 36 0 chr2 18250938 18250994 -232436860 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 23 0 0 0 chr2 18251014 18251037 -232436817 + AT_rich Low_complexity Low_complexity 1 23 0 276 283 10 20 chr2 18251253 18251352 -232436502 + CT-rich Low_complexity Low_complexity 3 100 0 272 197 51 8 chr2 18251384 18251501 -232436353 + GA-rich Low_complexity Low_complexity 5 126 0 261 364 34 17 chr2 18251896 18252014 -232435840 + MIR3 SINE MIR 4 123 -85 2414 77 0 3 chr2 18253327 18253627 -232434227 + AluY SINE Alu 1 299 -12 185 81 0 54 chr2 18253816 18253853 -232434001 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 247 414 40 0 chr2 18253988 18254087 -232433767 - L2 LINE L2 -48 3224 3122 278 339 18 18 chr2 18254744 18254856 -232432998 + MIR SINE MIR 24 135 -73 363 121 0 0 chr2 18255065 18255123 -232432731 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 205 204 41 0 chr2 18256305 18256354 -232431500 + (TG)n Simple_repeat Simple_repeat 2 52 0 448 289 102 21 chr2 18257128 18257315 -232430539 + MIR SINE MIR 46 247 -15 342 289 183 0 chr2 18257553 18257788 -232430066 - HsTC2 DNA Tc2 -1010 888 611 2001 86 50 11 chr2 18258036 18258316 -232429538 - AluY SINE Alu -20 291 1 351 121 0 48 chr2 18258616 18258699 -232429155 + L1MA6 LINE L1 6220 6298 -2 2233 162 11 37 chr2 18258865 18259329 -232428525 - Tigger2 DNA MER2_type 0 2718 2267 326 194 15 0 chr2 18259313 18259380 -232428474 - Tigger2 DNA MER2_type -2649 69 2 * 335 299 37 9 chr2 18259575 18259682 -232428172 + MIR SINE MIR 32 141 -121 2311 111 30 25 chr2 18260332 18260694 -232427160 + THE1B LTR MaLR 1 364 0 6513 226 55 61 chr2 18262037 18263010 -232424844 - L1PB3 LINE L1 -2 7571 6594 1981 115 3 21 chr2 18263010 18263336 -232424518 - AluY SINE Alu 0 321 1 6513 226 55 61 chr2 18263336 18264967 -232422887 - L1PB3 LINE L1 -979 6594 4955 2234 37 0 0 chr2 18264967 18265239 -232422615 + L1PA4 LINE L1 5878 6149 -6 6513 226 55 61 chr2 18265239 18267615 -232420239 - L1PB3 LINE L1 -2618 4955 3628 2077 70 0 4 chr2 18267615 18267872 -232419982 - AluY SINE Alu -16 295 40 6513 226 55 61 chr2 18267872 18270778 -232417076 - L1PB3 LINE L1 -3945 3628 706 193 223 85 64 chr2 18270837 18270931 -232416923 + MIR SINE MIR 148 243 -19 24 67 0 0 chr2 18271327 18271372 -232416482 + AT_rich Low_complexity Low_complexity 1 45 0 272 328 95 53 chr2 18272182 18272371 -232415483 - MIR SINE MIR -16 246 50 2695 102 5 3 chr2 18272904 18273278 -232414576 + THE1C LTR MaLR 1 375 0 1393 280 170 61 chr2 18273744 18275267 -232412587 - L2 LINE L2 0 3313 1638 207 0 0 0 chr2 18276493 18276516 -232411338 + (T)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr2 18277155 18277176 -232410678 + AT_rich Low_complexity Low_complexity 1 21 0 260 274 186 0 chr2 18277914 18278027 -232409827 - MIR SINE MIR 0 262 129 2218 204 16 45 chr2 18278175 18278661 -232409193 + MER70A LTR ERVL 1 472 0 1899 118 7 3 chr2 18278843 18279131 -232408723 - AluSc SINE Alu 0 309 21 467 344 62 0 chr2 18279526 18279718 -232408136 + MIR SINE MIR 59 262 0 982 178 0 14 chr2 18280061 18280272 -232407582 + L1M4 LINE L1 5451 5657 -511 3222 214 32 10 chr2 18280280 18280976 -232406878 - L1PB3 LINE L1 -6845 720 10 242 256 98 0 chr2 18281658 18281740 -232406114 - MIR3 SINE MIR -10 198 109 233 352 132 0 chr2 18281759 18281850 -232406004 + L2 LINE L2 3146 3248 -24 216 300 0 0 chr2 18282252 18282302 -232405552 + (TG)n Simple_repeat Simple_repeat 2 51 0 487 179 74 99 chr2 18283112 18283274 -232404580 + Charlie8 DNA MER1_type 1 158 -2259 1255 231 141 53 chr2 18283382 18283814 -232404040 + MER21B LTR ERV1 12 481 -382 2072 184 88 7 chr2 18283815 18284493 -232403361 + L1MA9 LINE L1 4786 5506 -743 783 242 11 0 chr2 18284495 18284673 -232403181 + L1MA9 LINE L1 5599 5778 -534 213 39 0 0 chr2 18284684 18284710 -232403144 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 43423 44 4 1 chr2 18284710 18290849 -232397005 - L1PA4 LINE L1 0 6155 3 1373 167 53 111 chr2 18290863 18290879 -232396975 + L1MA9 LINE L1 5811 5826 -486 2107 101 21 3 chr2 18290879 18291167 -232396687 + AluSc SINE Alu 1 293 -16 1373 167 53 111 chr2 18291167 18291600 -232396254 + L1MA9 LINE L1 5826 6234 -78 705 198 12 17 chr2 18291561 18291733 -232396121 - L1M2 LINE L1 -582 5730 5560 * 30 59 0 0 chr2 18291849 18291900 -232395954 + AT_rich Low_complexity Low_complexity 1 51 0 996 239 46 31 chr2 18291923 18292183 -232395671 + MER21B LTR ERV1 472 735 -128 2552 193 52 4 chr2 18292186 18292684 -232395170 + Tigger7 DNA MER2_type 1 522 -211 497 202 11 0 chr2 18292684 18292773 -232395081 + Tigger7 DNA MER2_type 2398 2487 0 336 292 165 49 chr2 18293290 18293756 -232394098 - L1ME4a LINE L1 -77 6044 5525 414 238 102 20 chr2 18293820 18293967 -232393887 - MIR SINE MIR -50 212 54 204 366 54 9 chr2 18294003 18294115 -232393739 - MIR SINE MIR -73 135 19 213 121 0 0 chr2 18294189 18294222 -232393632 + (TG)n Simple_repeat Simple_repeat 2 34 0 3557 258 114 28 chr2 18296891 18298484 -232389370 + HAL1 LINE L1 84 1813 -694 2495 157 59 0 chr2 18298555 18298981 -232388873 - LTR47A LTR ERVL -1 451 1 445 277 158 32 chr2 18298982 18299260 -232388594 + MLT1J2 LTR MaLR 77 389 -61 1379 281 96 20 chr2 18299305 18299949 -232387905 + HAL1 LINE L1 1815 2507 0 2395 249 38 4 chr2 18301785 18302702 -232385152 - L1M LINE L1 -767 5379 2479 1777 208 102 71 chr2 18302702 18303309 -232384545 - MLT1E2 LTR MaLR 0 626 1 766 218 93 19 chr2 18303480 18303987 -232383867 - L1MDb LINE L1 -3667 2739 2200 7272 134 31 55 chr2 18303989 18305317 -232382537 - HSMAR2 DNA Mariner -1 1301 6 3322 231 55 20 chr2 18305320 18306748 -232381106 - L1MDb LINE L1 -4211 2195 716 254 33 0 0 chr2 18307122 18307152 -232380702 - THE1B LTR MaLR -2 362 333 2372 101 24 6 chr2 18307350 18307686 -232380168 - THE1B LTR MaLR -22 342 1 1497 171 111 62 chr2 18308143 18308581 -232379273 + LTR56 LTR ERV1 1 436 -1 411 304 0 0 chr2 18308600 18308712 -232379142 - L1MDb LINE L1 -6276 133 22 285 271 64 7 chr2 18308809 18308949 -232378905 - L1ME4a LINE L1 -13 6108 5961 1040 159 88 100 chr2 18309249 18309588 -232378266 + LTR49 LTR ERV1 3 337 -258 799 193 0 53 chr2 18309717 18309904 -232377950 - FRAM SINE Alu 0 176 1 267 31 0 0 chr2 18310632 18310664 -232377190 + (ATG)n Simple_repeat Simple_repeat 1 32 0 222 337 0 47 chr2 18312074 18312160 -232375694 - L2 LINE L2 0 3313 3232 258 299 85 60 chr2 18312452 18312653 -232375201 - L2 LINE L2 0 3272 3067 250 338 46 22 chr2 18313108 18313276 -232374578 - MIR SINE MIR -57 205 32 255 326 54 16 chr2 18313491 18313620 -232374234 + MIR SINE MIR 39 172 -90 251 122 20 0 chr2 18314177 18314226 -232373628 + (CA)n Simple_repeat Simple_repeat 1 50 0 351 243 0 0 chr2 18314768 18314838 -232373016 + L2 LINE L2 3200 3269 -44 366 350 11 28 chr2 18315558 18315735 -232372119 - L1ME4a LINE L1 -201 5920 5747 1403 143 5 0 chr2 18316187 18316411 -232371443 + L1MB3 LINE L1 5545 5769 -414 1706 171 35 9 chr2 18316449 18316789 -232371065 + L1MB3 LINE L1 5759 6107 -76 1578 96 14 0 chr2 18317225 18317445 -232370409 + MLT2A2 LTR ERVL 1 223 -230 622 71 0 0 chr2 18317445 18317530 -232370324 + MLT2A2 LTR ERVL 369 453 0 216 97 0 0 chr2 18318721 18318752 -232369102 + (TA)n Simple_repeat Simple_repeat 2 32 0 2170 134 0 0 chr2 18319072 18319370 -232368484 - AluSx SINE Alu -14 298 1 3817 143 68 52 chr2 18319580 18320394 -232367460 + L1MA9 LINE L1 5473 6299 -13 203 219 82 82 chr2 18320944 18321017 -232366837 + MIR SINE MIR 28 100 -162 22 35 0 0 chr2 18321286 18321315 -232366539 + AT_rich Low_complexity Low_complexity 1 29 0 357 281 28 40 chr2 18321994 18322245 -232365609 - HAL1b LINE L1 -79 2428 793 1801 163 52 0 chr2 18322288 18322576 -232365278 + AluSx SINE Alu 4 306 -6 1757 181 10 3 chr2 18322580 18322883 -232364971 + AluJb SINE Alu 1 305 -7 333 181 32 11 chr2 18322890 18322984 -232364870 + GA-rich Low_complexity Low_complexity 1 96 0 2062 150 12 0 chr2 18323020 18323353 -232364501 + MER1B DNA MER1_type 1 337 0 527 293 14 0 chr2 18323519 18323666 -232364188 + MIR SINE MIR 82 230 -32 1638 193 49 21 chr2 18324040 18324470 -232363384 - L1PB4 LINE L1 -824 5322 4881 4601 132 8 56 chr2 18324470 18325359 -232362495 + L1PB4 LINE L1 5308 6153 -3 311 310 11 0 chr2 18325736 18325823 -232362031 + L1M4b LINE L1 1360 1447 -5412 369 346 0 10 chr2 18326120 18326471 -232361383 + L1M4b LINE L1 1926 2278 -4679 13239 83 8 8 chr2 18326471 18328474 -232359380 + L1PA7 LINE L1 3532 5553 -601 8211 72 8 4 chr2 18328474 18329541 -232358313 + MER11C LTR ERVK 1 1071 0 13239 83 8 8 chr2 18329541 18330141 -232357713 + L1PA7 LINE L1 5552 6151 -3 369 346 0 10 chr2 18330141 18330268 -232357586 + L1M4b LINE L1 2278 2408 -4549 313 211 53 0 chr2 18330367 18330462 -232357392 + MLT1I LTR MaLR 304 403 -6 576 235 174 0 chr2 18330603 18330735 -232357119 - MER5A DNA MER1_type -6 183 29 1439 299 63 32 chr2 18331049 18332185 -232355669 - L1MEd LINE L1 -953 1537 268 1678 182 28 25 chr2 18332279 18332641 -232355213 + MLT1A1 LTR MaLR 1 363 -2 577 323 53 8 chr2 18334169 18334421 -232353433 + MIR SINE MIR 5 262 0 198 325 162 52 chr2 18336203 18336394 -232351460 - MIR SINE MIR -31 231 20 233 279 19 87 chr2 18336826 18336930 -232350924 + MIR3 SINE MIR 67 163 -45 206 274 0 107 chr2 18337001 18337085 -232350769 - L2 LINE L2 -5 3308 3234 285 209 60 0 chr2 18337164 18337231 -232350623 - MLT1I LTR MaLR -8 401 331 354 245 86 26 chr2 18337409 18337560 -232350294 - MLT1J2 LTR MaLR -290 160 1 820 176 6 42 chr2 18338005 18338170 -232349684 - FRAM SINE Alu -7 159 1 22 0 0 0 chr2 18338261 18338283 -232349571 + AT_rich Low_complexity Low_complexity 1 22 0 2571 219 22 2 chr2 18338292 18338882 -232348972 - L1ME1 LINE L1 -6 6160 5559 223 278 221 11 chr2 18339049 18339172 -232348682 + MIR SINE MIR 29 183 -65 * 581 273 118 46 chr2 18339171 18339409 -232348445 + MIR SINE MIR 8 262 0 2264 121 0 6 chr2 18339484 18339798 -232348056 + AluSx SINE Alu 1 312 0 664 227 8 0 chr2 18339934 18340062 -232347792 + FLAM_A SINE Alu 1 129 -4 438 254 0 0 chr2 18340638 18340756 -232347098 - L1MC4 LINE L1 -1 8041 7924 519 251 18 31 chr2 18340795 18341022 -232346832 - L1MC4 LINE L1 -128 7914 7691 663 258 99 44 chr2 18341031 18341290 -232346564 - L1MC4a LINE L1 -1279 6529 6235 1824 83 4 11 chr2 18341290 18341554 -232346300 - L1PA8 LINE L1 0 6172 5911 663 258 99 44 chr2 18341554 18341729 -232346125 - L1MC4a LINE L1 -1573 6235 6071 207 222 33 22 chr2 18342740 18342830 -232345024 + (TA)n Simple_repeat Simple_repeat 2 92 0 329 342 57 16 chr2 18443775 18443968 -232243886 - L2 LINE L2 -234 3038 2838 2173 178 73 9 chr2 18444385 18444824 -232243030 + MLT1C LTR MaLR 1 467 0 24 32 0 0 chr2 18445124 18445155 -232242699 + AT_rich Low_complexity Low_complexity 1 31 0 191 167 42 28 chr2 18445395 18445467 -232242387 + GA-rich Low_complexity Low_complexity 3 75 0 333 0 0 0 chr2 18447528 18447565 -232240289 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr2 18447665 18447693 -232240161 + AT_rich Low_complexity Low_complexity 1 28 0 777 154 27 58 chr2 18447903 18447930 -232239924 + L1MA7 LINE L1 6108 6134 -157 1796 158 0 17 chr2 18447930 18448228 -232239626 - AluJb SINE Alu -19 293 1 777 154 27 58 chr2 18448228 18448388 -232239466 + L1MA7 LINE L1 6134 6289 -2 22 0 0 0 chr2 18448602 18448624 -232239230 + AT_rich Low_complexity Low_complexity 1 22 0 2003 127 68 14 chr2 18448680 18449035 -232238819 + THE1C LTR MaLR 2 375 0 311 304 20 0 chr2 18451489 18451591 -232236263 - MLT1J2 LTR MaLR 0 450 347 215 313 31 0 chr2 18451594 18451658 -232236196 + (CATG)n Simple_repeat Simple_repeat 2 67 0 293 263 113 0 chr2 18451670 18451750 -232236104 - MLT1J1 LTR MaLR -117 329 241 507 228 52 15 chr2 18451751 18451887 -232235967 - MLT1J2 LTR MaLR -240 210 70 453 220 0 119 chr2 18452119 18452278 -232235576 - MIR SINE MIR -2 260 121 366 298 71 34 chr2 18452420 18453235 -232234619 - L1MEd LINE L1 -2920 3209 2365 783 166 0 190 chr2 18453280 18453564 -232234290 + L1M4 LINE L1 4868 5097 -1049 633 259 32 37 chr2 18453602 18453791 -232234063 + MER58A DNA MER1_type 34 221 -3 349 335 66 19 chr2 18453844 18454101 -232233753 - HAL1 LINE L1 -753 1754 1486 232 306 24 16 chr2 18454364 18454488 -232233366 - L1MEd LINE L1 -5129 990 866 276 303 28 62 chr2 18455775 18456099 -232231755 + HAL1 LINE L1 2001 2313 -194 436 252 9 9 chr2 18456276 18456391 -232231463 + L1PA16 LINE L1 6046 6160 -6 8246 84 2 0 chr2 18456398 18457519 -232230335 - L1P LINE L1 -1833 4313 3191 7057 62 0 0 chr2 18457520 18458620 -232229234 + L1PA7 LINE L1 5037 6148 -6 856 276 30 8 chr2 18458652 18458920 -232228934 - MER97b DNA MER1_type? -533 520 247 76 61 0 0 chr2 18458930 18459062 -232228792 + AT_rich Low_complexity Low_complexity 1 132 0 26 30 0 0 chr2 18459111 18459144 -232228710 + AT_rich Low_complexity Low_complexity 1 33 0 643 207 78 47 chr2 18459193 18459386 -232228468 - MER97c DNA MER1_type? -836 254 56 6861 157 24 9 chr2 18461475 18462687 -232225167 - Tigger3b DNA MER2_type -1 1230 1 200 282 186 16 chr2 18463271 18463395 -232224459 - MIR SINE MIR -53 209 65 317 306 22 0 chr2 18464567 18464747 -232223107 + L1ME4a LINE L1 5691 5874 -247 6745 65 2 4 chr2 18464760 18466041 -232221813 - L1PA7 LINE L1 0 6154 4865 6443 95 0 0 chr2 18466041 18466928 -232220926 + L1PA7 LINE L1 3976 4862 -1284 1154 283 16 10 chr2 18466976 18467284 -232220570 + HsTC2a DNA Tc2 10 319 -425 2819 255 41 18 chr2 18467286 18468259 -232219595 + L1M4 LINE L1 4044 5039 -1107 1847 188 33 0 chr2 18469592 18469928 -232217926 + MER7A DNA MER2_type 1 345 -1 21 0 0 0 chr2 18469963 18469984 -232217870 + AT_rich Low_complexity Low_complexity 1 21 0 219 36 0 0 chr2 18470110 18470138 -232217716 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2414 40 0 30 chr2 18470140 18470444 -232217410 - AluY SINE Alu -16 295 1 22 0 0 0 chr2 18470450 18470472 -232217382 + AT_rich Low_complexity Low_complexity 1 22 0 2308 69 0 3 chr2 18470518 18470809 -232217045 - AluY SINE Alu -21 290 1 26 30 0 0 chr2 18470817 18470850 -232217004 + AT_rich Low_complexity Low_complexity 1 33 0 2270 163 75 5 chr2 18472217 18472617 -232215237 - MSTA LTR MaLR 0 428 1 349 246 183 0 chr2 18472622 18472764 -232215090 - MIR SINE MIR -2 260 93 381 301 145 62 chr2 18472908 18473363 -232214491 - L1ME4a LINE L1 -56 6065 5573 26 0 0 0 chr2 18473741 18473767 -232214087 + AT_rich Low_complexity Low_complexity 1 26 0 32 0 0 0 chr2 18473903 18473935 -232213919 + AT_rich Low_complexity Low_complexity 1 32 0 23 68 0 0 chr2 18474069 18474113 -232213741 + AT_rich Low_complexity Low_complexity 1 44 0 202 182 0 0 chr2 18474363 18474396 -232213458 + (TG)n Simple_repeat Simple_repeat 2 34 0 2551 52 7 0 chr2 18474973 18475278 -232212576 - AluY SINE Alu -4 307 1 22 56 0 0 chr2 18475493 18475529 -232212325 + AT_rich Low_complexity Low_complexity 1 36 0 27 65 0 26 chr2 18475615 18475637 -232212217 + AT_rich Low_complexity Low_complexity 1 22 -53 1493 96 36 0 chr2 18475637 18475856 -232211998 + L1PA10 LINE L1 5942 6168 0 27 65 0 26 chr2 18475856 18475910 -232211944 + AT_rich Low_complexity Low_complexity 22 75 0 2010 108 54 0 chr2 18476110 18476387 -232211467 + AluSg SINE Alu 1 292 -18 233 92 58 23 chr2 18476387 18476474 -232211380 + (TTATA)n Simple_repeat Simple_repeat 5 94 0 241 306 52 43 chr2 18477151 18477475 -232210379 + L1MC4a LINE L1 5268 5594 -2214 372 328 34 60 chr2 18477498 18477733 -232210121 + L1MC4a LINE L1 5682 5910 -1898 2186 128 0 0 chr2 18477735 18478040 -232209814 - AluSq SINE Alu -8 305 1 28 71 0 0 chr2 18478262 18478318 -232209536 + AT_rich Low_complexity Low_complexity 1 56 0 282 206 0 0 chr2 18478630 18478698 -232209156 + (ATG)n Simple_repeat Simple_repeat 3 70 0 8132 138 24 15 chr2 18479248 18480643 -232207211 + Tigger1 DNA MER2_type 95 1501 -917 2302 140 3 0 chr2 18480643 18481022 -232206832 - Tigger1 DNA MER2_type -356 2062 1683 764 202 104 0 chr2 18481231 18481414 -232206440 - MER105 DNA DNA -1 203 2 264 282 10 10 chr2 18481451 18481554 -232206300 + MLT1L LTR MaLR 513 615 0 3111 236 66 34 chr2 18482162 18482867 -232204987 + L1ME1 LINE L1 4099 4780 -1386 1990 112 31 14 chr2 18482867 18482986 -232204868 + AluSc SINE Alu 1 116 -193 207 0 0 0 chr2 18482986 18483009 -232204845 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1990 112 31 14 chr2 18483009 18483175 -232204679 + AluSc SINE Alu 116 291 -18 3111 236 66 34 chr2 18483175 18484438 -232203416 + L1ME1 LINE L1 4780 6120 -46 180 158 0 0 chr2 18484903 18484941 -232202913 + (TA)n Simple_repeat Simple_repeat 2 39 0 288 0 0 0 chr2 18484943 18484975 -232202879 + (TC)n Simple_repeat Simple_repeat 2 33 0 225 0 0 0 chr2 18484974 18484999 -232202855 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 1392 183 28 41 chr2 18485535 18485913 -232201941 + MLT1C LTR MaLR 3 442 -25 742 239 144 1 chr2 18486284 18486587 -232201267 - MER57A LTR ERV1 -12 391 69 2360 99 7 0 chr2 18486589 18486893 -232200961 - AluSg SINE Alu -4 306 1 1500 93 13 49 chr2 18486893 18487118 -232200736 - AluSq SINE Alu -14 299 83 411 364 8 0 chr2 18487511 18487640 -232200214 - L2 LINE L2 0 3272 3143 1147 187 60 4 chr2 18488849 18489117 -232198737 + L1MC3 LINE L1 7476 7758 -27 1627 156 39 0 chr2 18490245 18490502 -232197352 - AluJb SINE Alu -45 267 1 10639 203 12 17 chr2 18490996 18494456 -232193398 + L1PB3 LINE L1 2712 6154 0 688 245 75 43 chr2 18494490 18494866 -232192988 + L1MC4 LINE L1 7654 8041 -1 417 287 161 31 chr2 18494933 18495288 -232192566 + L1ME4a LINE L1 5535 5935 -186 192 77 0 0 chr2 18495379 18495405 -232192449 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1060 154 0 6 chr2 18497904 18498066 -232189788 + FRAM SINE Alu 1 160 -16 2234 113 7 3 chr2 18499574 18499875 -232187979 - AluSq SINE Alu -11 302 1 183 205 0 0 chr2 18500112 18500151 -232187703 + CT-rich Low_complexity Low_complexity 2 40 0 213 311 16 0 chr2 18500866 18500927 -232186927 - MER91B DNA MER1_type -119 71 10 253 333 22 0 chr2 18500937 18501027 -232186827 - MIR3 SINE MIR -3 205 114 2311 84 0 0 chr2 18501221 18501508 -232186346 + AluSc SINE Alu 1 287 -22 441 286 70 60 chr2 18501828 18502013 -232185841 + MIR3 SINE MIR 13 199 -9 183 42 0 0 chr2 18502963 18502987 -232184867 + (GA)n Simple_repeat Simple_repeat 2 25 0 256 286 78 0 chr2 18503489 18503566 -232184288 + MIR3 SINE MIR 78 160 -48 410 218 96 102 chr2 18503568 18503765 -232184089 - MER102b DNA MER1_type -1 340 145 1039 229 175 16 chr2 18503775 18504163 -232183691 - MLT2B2 LTR ERVL -65 450 1 1508 234 58 42 chr2 18504185 18504667 -232183187 + MLT1E2 LTR MaLR 135 624 -2 227 251 6 75 chr2 18504979 18505085 -232182769 - MIR SINE MIR -52 156 88 264 248 30 69 chr2 18505209 18505310 -232182544 - MIR SINE MIR -102 160 64 202 283 0 17 chr2 18506162 18506222 -232181632 + L3 LINE CR1 1518 1576 -1 1035 257 84 42 chr2 18506590 18506956 -232180898 + MLT1E LTR MaLR 1 385 -208 401 63 21 179 chr2 18506956 18507020 -232180834 - MADE1 DNA Mariner 0 80 34 2381 72 0 3 chr2 18507020 18507311 -232180543 - AluY SINE Alu -11 300 11 401 63 21 179 chr2 18507311 18507341 -232180513 - MADE1 DNA Mariner -46 34 1 1035 257 84 42 chr2 18507341 18507559 -232180295 + MLT1E LTR MaLR 385 592 -1 250 326 138 0 chr2 18508225 18508363 -232179491 - MIR3 SINE MIR -19 189 33 237 313 9 18 chr2 18508973 18509085 -232178769 + GA-rich Low_complexity Low_complexity 5 115 0 220 302 24 63 chr2 18510324 18510450 -232177404 + MIR SINE MIR 61 181 -81 218 209 0 0 chr2 18510565 18510608 -232177246 + L2 LINE L2 3263 3305 -8 222 318 24 24 chr2 18511316 18511401 -232176453 + L2 LINE L2 2897 2981 -291 196 339 17 0 chr2 18511416 18511475 -232176379 + L2 LINE L2 3116 3175 -97 926 182 86 0 chr2 18511563 18511750 -232176104 + MER3 DNA MER1_type 7 209 0 312 160 0 0 chr2 18511707 18511757 -232176097 - MER3 DNA MER1_type -119 90 41 * 238 329 12 0 chr2 18512648 18512730 -232175124 - MIR SINE MIR -72 136 54 * 389 305 108 15 chr2 18512718 18512921 -232174933 - L3 LINE CR1 -925 652 431 223 356 91 30 chr2 18515591 18515723 -232172131 - MIR3 SINE MIR -63 145 6 259 219 19 38 chr2 18516441 18516546 -232171308 + (TA)n Simple_repeat Simple_repeat 2 104 0 205 346 79 64 chr2 18517199 18517479 -232170375 - L2 LINE L2 -53 3219 2936 427 316 120 44 chr2 18519364 18519589 -232168265 - MIR SINE MIR -13 249 8 335 253 33 22 chr2 18521226 18521317 -232166537 + MIR SINE MIR 49 140 -68 215 208 38 38 chr2 18521347 18521400 -232166454 - MER5A DNA MER1_type -74 115 63 269 260 0 13 chr2 18521695 18521772 -232166082 - MLT1J2 LTR MaLR -14 436 361 2276 99 0 13 chr2 18522044 18522358 -232165496 + AluY SINE Alu 1 310 -1 186 43 0 0 chr2 18523060 18523083 -232164771 + (GA)n Simple_repeat Simple_repeat 1 23 0 196 237 34 0 chr2 18523293 18523352 -232164502 - L2 LINE L2 -528 2786 2726 450 312 59 10 chr2 18523451 18523653 -232164201 + MLT1J LTR MaLR 3 214 -297 754 253 0 22 chr2 18523756 18523981 -232163873 - L1M4 LINE L1 -1239 4907 4688 409 231 49 107 chr2 18523983 18524226 -232163628 + MER112 DNA MER1_type 25 253 -7 324 307 49 19 chr2 18524542 18524714 -232163140 - MIR SINE MIR -55 207 30 557 194 34 27 chr2 18524879 18525040 -232162814 + MLT1J LTR MaLR 295 511 0 30084 103 16 22 chr2 18526747 18529293 -232158561 + L1PA7 LINE L1 5 2564 -3905 239 0 0 31 chr2 18529293 18529325 -232158529 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 30084 103 16 22 chr2 18529325 18533139 -232154715 + L1PA7 LINE L1 2564 6398 -71 203 61 30 0 chr2 18533139 18533172 -232154682 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 30084 103 16 22 chr2 18533172 18533183 -232154671 + L1PA7 LINE L1 6398 6408 -61 2269 108 23 0 chr2 18533183 18533489 -232154365 + AluSp SINE Alu 1 313 0 766 247 81 9 chr2 18533496 18533649 -232154205 - L1MD2 LINE L1 -55 6304 6129 * 300 53 0 0 chr2 18533649 18533687 -232154167 + (TG)n Simple_repeat Simple_repeat 2 39 0 766 247 81 9 chr2 18533687 18533756 -232154098 - L1MD2 LINE L1 -230 6129 6066 186 342 108 32 chr2 18534824 18534982 -232152872 + L2 LINE L2 2890 3059 -213 386 352 40 5 chr2 18535750 18535949 -232151905 - MIR SINE MIR -1 261 56 710 234 114 26 chr2 18538346 18538516 -232149338 - MIR SINE MIR -8 254 58 2130 161 72 15 chr2 18538516 18538919 -232148935 - MSTB LTR MaLR 0 426 1 710 234 114 26 chr2 18538919 18538975 -232148879 - MIR SINE MIR -204 58 8 313 301 59 65 chr2 18539029 18539215 -232148639 - L3 LINE CR1 -146 1431 1247 443 266 96 0 chr2 18539399 18539628 -232148226 + L1ME4a LINE L1 5675 5925 -196 372 197 239 0 chr2 18540104 18540221 -232147633 + MER53 DNA DNA 38 182 -7 2406 85 7 0 chr2 18540549 18540855 -232146999 + AluY SINE Alu 4 311 0 226 259 304 0 chr2 18541592 18541704 -232146150 - MIR SINE MIR -109 153 8 310 344 90 33 chr2 18541848 18542092 -232145762 - L2 LINE L2 -631 2683 2426 236 227 45 80 chr2 18544025 18544113 -232143741 - L2 LINE L2 0 3313 3229 872 338 83 28 chr2 18544325 18545000 -232142854 - L2 LINE L2 -376 2938 2227 194 233 0 23 chr2 18545298 18545341 -232142513 + L2 LINE L2 3222 3263 -9 292 247 0 12 chr2 18545385 18545466 -232142388 + L3 LINE CR1 1444 1523 -54 236 308 164 27 chr2 18545754 18545900 -232141954 + MIR3 SINE MIR 41 206 -2 233 265 91 83 chr2 18546036 18546168 -232141686 - MIR SINE MIR -109 153 21 263 279 0 0 chr2 18547067 18547135 -232140719 + HERVL LTR ERVL 4778 4845 -809 264 276 40 13 chr2 18547934 18548010 -232139844 + L2 LINE L2 3191 3268 -4 231 227 7 40 chr2 18548013 18548163 -232139691 + GA-rich Low_complexity Low_complexity 4 148 0 1026 142 0 17 chr2 18548315 18548603 -232139251 + (GGAA)n Simple_repeat Simple_repeat 4 284 0 398 355 33 0 chr2 18549616 18549768 -232138086 + MIR3 SINE MIR 29 185 -23 2310 97 3 0 chr2 18550461 18550761 -232137093 - AluSg SINE Alu -9 301 1 911 20 0 0 chr2 18550770 18550919 -232136935 - AluYb8 SINE Alu 0 336 188 471 135 0 0 chr2 18552320 18552394 -232135460 + LTR32 LTR ERVL 15 88 -383 1217 157 12 44 chr2 18552409 18552657 -232135197 + LTR32 LTR ERVL 232 471 0 500 353 45 0 chr2 18553208 18553409 -232134445 + MIR SINE MIR 50 259 -3 225 238 30 38 chr2 18554559 18554651 -232133203 - MIR SINE MIR -59 149 52 32 75 0 0 chr2 18554786 18554853 -232133001 + AT_rich Low_complexity Low_complexity 1 67 0 30 0 0 0 chr2 18555234 18555264 -232132590 + AT_rich Low_complexity Low_complexity 1 30 0 393 225 136 78 chr2 18555430 18555621 -232132233 - MIR SINE MIR -11 251 50 273 151 0 0 chr2 18558055 18558108 -232129746 + (CA)n Simple_repeat Simple_repeat 2 54 0 564 237 96 6 chr2 18558630 18558807 -232129047 - MER3 DNA MER1_type -2 207 15 252 296 38 75 chr2 18559531 18559690 -232128164 + MIR SINE MIR 54 206 -56 242 368 39 26 chr2 18560597 18560752 -232127102 + MIR SINE MIR 20 176 -86 215 319 0 0 chr2 18562165 18562237 -232125617 + L2 LINE L2 3242 3313 0 3092 188 79 17 chr2 18562521 18563302 -232124552 + L1MB2 LINE L1 5340 6169 -2 21 0 0 0 chr2 18563329 18563350 -232124504 + AT_rich Low_complexity Low_complexity 1 21 0 1931 142 25 0 chr2 18563575 18563872 -232123982 - AluSx SINE Alu 0 306 3 228 208 228 10 chr2 18563912 18564013 -232123841 - L1ME LINE L1 -425 5696 5574 35 0 0 0 chr2 18564402 18564437 -232123417 + AT_rich Low_complexity Low_complexity 1 35 0 547 256 71 50 chr2 18564660 18564898 -232122956 - MIR SINE MIR -18 244 2 686 291 14 38 chr2 18565522 18565732 -232122122 - MIR SINE MIR -45 217 13 194 103 0 26 chr2 18566456 18566495 -232121359 + (TAAAAA)n Simple_repeat Simple_repeat 4 41 0 687 196 78 7 chr2 18568331 18568484 -232119370 - MER96 DNA MER1_type? 0 175 12 272 389 51 5 chr2 18572954 18573170 -232114684 + L2 LINE L2 2631 2856 -458 405 313 17 0 chr2 18573304 18573419 -232114435 + L2 LINE L2 3143 3259 -13 330 304 50 44 chr2 18573442 18573623 -232114231 + L2 LINE L2 3118 3299 -14 646 254 85 10 chr2 18573747 18573948 -232113906 + MER58A DNA MER1_type 4 219 -5 352 306 25 0 chr2 18573960 18574081 -232113773 + MIR SINE MIR 138 261 -1 291 309 27 9 chr2 18574290 18574400 -232113454 - MIR SINE MIR -103 159 48 771 298 78 35 chr2 18574575 18575062 -232112792 + L1ME3 LINE L1 5369 5876 -286 23 0 0 0 chr2 18575353 18575376 -232112478 + AT_rich Low_complexity Low_complexity 1 23 0 193 430 37 9 chr2 18575395 18575502 -232112352 - L2 LINE L2 -22 3250 3141 468 0 0 0 chr2 18577238 18577290 -232110564 + (TG)n Simple_repeat Simple_repeat 2 53 0 748 298 25 44 chr2 18578988 18579304 -232108550 + L2 LINE L2 2991 3300 -13 438 211 26 9 chr2 18579325 18579439 -232108415 - MER97b DNA MER1_type? 0 1053 938 30 59 0 0 chr2 18579463 18579514 -232108340 + AT_rich Low_complexity Low_complexity 1 51 0 664 198 101 48 chr2 18579650 18579898 -232107956 - MER97b DNA MER1_type? -194 859 599 255 61 0 0 chr2 18579900 18579933 -232107921 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 6243 208 22 14 chr2 18579994 18581473 -232106381 + L1P LINE L1 3862 5352 -794 566 274 11 40 chr2 18681897 18682072 -232005782 - MER5B DNA MER1_type -8 170 1 190 242 0 91 chr2 18682655 18682721 -232005133 - L2 LINE L2 -3 3269 3210 308 224 71 59 chr2 18683300 18683385 -232004469 + MIR SINE MIR 75 160 -102 1166 196 5 27 chr2 18683757 18683812 -232004042 + MLT1D LTR MaLR 287 342 -163 2377 133 19 30 chr2 18683812 18684180 -232003674 + THE1B LTR MaLR 1 364 0 1166 196 5 27 chr2 18684180 18684348 -232003506 + MLT1D LTR MaLR 342 505 0 189 107 0 0 chr2 18684509 18684537 -232003317 + (TAA)n Simple_repeat Simple_repeat 3 30 0 284 173 25 25 chr2 18685327 18685408 -232002446 + (TA)n Simple_repeat Simple_repeat 2 82 0 4205 159 28 44 chr2 18685632 18686021 -232001833 - L1MC3 LINE L1 0 7785 7391 2472 181 24 2 chr2 18686021 18686440 -232001414 + MSTA LTR MaLR 1 428 0 4205 159 28 44 chr2 18686440 18686917 -232000937 - L1MC3 LINE L1 -394 7391 6954 4470 271 71 60 chr2 18688570 18690968 -231996886 + HAL1 LINE L1 47 2470 -37 583 279 153 13 chr2 18690982 18691211 -231996643 + MIR SINE MIR 2 262 0 206 302 48 0 chr2 18692017 18692080 -231995774 + MIR SINE MIR 60 125 -83 339 271 83 42 chr2 18692124 18692268 -231995586 - MIR3 SINE MIR -58 150 1 2355 106 116 64 chr2 18693103 18693510 -231994344 - MSTA LTR MaLR 0 428 1 290 289 158 26 chr2 18693863 18693977 -231993877 + L2 LINE L2 3134 3262 -10 254 258 16 0 chr2 18695419 18695481 -231992373 + MIR SINE MIR 69 131 -131 255 303 94 82 chr2 18695497 18696217 -231991637 - L2 LINE L2 -252 3020 2295 1261 216 149 11 chr2 18696217 18696565 -231991289 - MSTD LTR MaLR 0 396 1 276 303 49 42 chr2 18696581 18696723 -231991131 - L2 LINE L2 -1044 2270 2128 1658 237 169 4 chr2 18696952 18697467 -231990387 - L1MD3 LINE L1 0 7995 7396 304 149 0 184 chr2 18697467 18697554 -231990300 - MLT1F1 LTR MaLR -448 119 49 2222 123 53 39 chr2 18697979 18698338 -231989516 + THE1B LTR MaLR 1 364 0 364 331 51 0 chr2 18698593 18698750 -231989104 + MIR3 SINE MIR 1 165 -43 593 200 164 18 chr2 18702344 18702509 -231985345 - MER5A DNA MER1_type 0 189 1 333 0 0 0 chr2 18703340 18703377 -231984477 + (TG)n Simple_repeat Simple_repeat 1 37 0 1310 165 25 38 chr2 18703503 18703848 -231984006 - MER33 DNA MER1_type 0 324 6 219 253 51 51 chr2 18704465 18704544 -231983310 + L2 LINE L2 3235 3313 0 1812 66 0 0 chr2 18705432 18705658 -231982196 + L1PA8 LINE L1 5912 6137 -35 404 289 82 0 chr2 18705659 18705853 -231982001 - L1MEc LINE L1 -3637 2578 2369 1198 267 113 61 chr2 18705926 18706067 -231981787 - L1MEc LINE L1 -3951 2445 2313 1572 201 0 17 chr2 18706067 18706360 -231981494 - AluJo SINE Alu -8 304 17 1198 267 113 61 chr2 18706360 18706723 -231981131 - L1MEc LINE L1 -4083 2313 1970 3293 195 11 7 chr2 18706723 18707283 -231980571 - MER68 LTR ERV1 0 562 1 1198 267 113 61 chr2 18707283 18707771 -231980083 - L1MEc LINE L1 -4426 1970 1401 355 183 0 0 chr2 18707908 18707968 -231979886 + MER20 DNA MER1_type 160 219 0 293 283 132 43 chr2 18708006 18708377 -231979477 - L1MEc LINE L1 -5204 1192 789 245 259 56 19 chr2 18708918 18709026 -231978828 + MER65B LTR ERV1 1 112 -419 1849 115 80 3 chr2 18709432 18709720 -231978134 - AluSx SINE Alu -2 310 1 22 0 0 0 chr2 18710441 18710463 -231977391 + AT_rich Low_complexity Low_complexity 1 22 0 239 295 45 18 chr2 18711082 18711194 -231976660 + MIR3 SINE MIR 69 183 -25 1814 168 0 3 chr2 18712078 18712363 -231975491 + AluJb SINE Alu 5 288 -24 2167 140 71 10 chr2 18712460 18712853 -231975001 + MER31A LTR ERV1 63 479 -6 1977 142 3 36 chr2 18712859 18713189 -231974665 + MER1B DNA MER1_type 21 339 0 296 320 103 21 chr2 18713190 18713287 -231974567 - MIR SINE MIR -130 132 28 237 33 0 0 chr2 18713387 18713417 -231974437 + (CA)n Simple_repeat Simple_repeat 1 30 0 391 254 35 0 chr2 18714797 18714911 -231972943 - LTR33 LTR ERVL -5 516 399 1815 92 17 4 chr2 18714919 18715158 -231972696 + AluSp SINE Alu 1 242 -71 419 289 9 0 chr2 18715204 18715318 -231972536 - LTR33 LTR ERVL -304 217 103 289 336 65 0 chr2 18715412 18715519 -231972335 - MIR SINE MIR -72 190 77 1807 54 35 139 chr2 18716133 18716449 -231971405 - AluY SINE Alu 0 311 29 543 203 40 62 chr2 18716496 18716673 -231971181 + MER104 DNA Tc2 8 180 0 2077 170 5 61 chr2 18717462 18717873 -231969981 - MLT1B LTR MaLR -2 388 1 264 332 66 43 chr2 18718811 18719112 -231968742 + L2 LINE L2 2554 2861 -453 180 256 39 116 chr2 18719168 18719297 -231968557 - MER5A DNA MER1_type -35 154 36 1287 0 0 0 chr2 18720611 18720749 -231967105 - AluYa5/8 SINE Alu -8 303 166 886 276 181 43 chr2 18720922 18721429 -231966425 - MLT1G1 LTR MaLR -3 592 16 1238 274 97 54 chr2 18721429 18722127 -231965727 - HAL1 LINE L1 -1728 779 52 408 319 104 22 chr2 18722172 18722354 -231965500 - L3 LINE CR1 -374 1203 1007 250 300 117 17 chr2 18722581 18722701 -231965153 + MER5A DNA MER1_type 9 140 -49 484 283 177 32 chr2 18725598 18726005 -231961849 + L2 LINE L2 2835 3300 -13 269 214 80 107 chr2 18726596 18726708 -231961146 + MER58A DNA MER1_type 1 109 -115 228 329 40 13 chr2 18726756 18726832 -231961022 + MIR3 SINE MIR 6 83 -125 804 236 19 0 chr2 18726836 18726993 -231960861 + MER58A DNA MER1_type 40 199 -25 2662 114 7 42 chr2 18727308 18727712 -231960142 + MLT1B LTR MaLR 1 390 0 395 281 118 0 chr2 18729959 18730094 -231957760 + L2 LINE L2 3163 3313 0 2653 129 21 21 chr2 18730196 18730621 -231957233 - MSTC LTR MaLR 0 428 4 262 287 126 0 chr2 18731009 18731096 -231956758 - MIR SINE MIR -108 154 57 2243 106 3 7 chr2 18731421 18731724 -231956130 + AluSx SINE Alu 1 302 -10 814 175 83 70 chr2 18733638 18733952 -231953902 - L1MA10 LINE L1 0 6334 6017 5601 111 7 0 chr2 18734052 18735073 -231952781 - L1PA11 LINE L1 -100 6074 5049 545 304 54 38 chr2 18735264 18735504 -231952350 + L3 LINE CR1 1104 1347 -230 587 172 166 0 chr2 18735795 18735964 -231951890 + MER5C DNA MER1_type 128 324 0 27 29 0 0 chr2 18736100 18736134 -231951720 + AT_rich Low_complexity Low_complexity 1 34 0 710 311 43 48 chr2 18736201 18736596 -231951258 + L3 LINE CR1 1128 1520 -57 1766 133 4 8 chr2 18736824 18737079 -231950775 - AluSx SINE Alu -54 258 5 1787 109 0 0 chr2 18737080 18737345 -231950509 - L1P4 LINE L1 -484 5681 5417 1058 123 36 36 chr2 18737345 18737530 -231950324 + L1MA9 LINE L1 6118 6312 0 391 307 86 7 chr2 18737716 18737856 -231949998 - L2 LINE L2 0 3313 3163 270 81 0 0 chr2 18737876 18737913 -231949941 + (TG)n Simple_repeat Simple_repeat 1 37 0 232 215 0 31 chr2 18739390 18739455 -231948399 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 2551 174 47 40 chr2 18739637 18739718 -231948136 - L1MA9 LINE L1 0 6312 6233 207 0 0 0 chr2 18739718 18739741 -231948113 + (TA)n Simple_repeat Simple_repeat 2 24 0 2551 174 47 40 chr2 18739741 18740186 -231947668 - L1MA9 LINE L1 -79 6233 5779 338 0 24 0 chr2 18740186 18740228 -231947626 + (CA)n Simple_repeat Simple_repeat 1 43 0 2551 174 47 40 chr2 18740228 18740292 -231947562 - L1MA9 LINE L1 -533 5779 5717 218 353 111 30 chr2 18740335 18740703 -231947151 - L2 LINE L2 -559 2755 2358 464 230 236 6 chr2 18740714 18740875 -231946979 - MIR SINE MIR -1 261 64 227 278 103 31 chr2 18741153 18741250 -231946604 - L2 LINE L2 -13 3300 3197 836 210 106 0 chr2 18742928 18743133 -231944721 - MIR SINE MIR -3 259 35 188 331 143 19 chr2 18743496 18743650 -231944204 + MIR3 SINE MIR 36 208 0 1822 184 35 30 chr2 18743713 18744260 -231943594 - MLT2A2 LTR ERVL 0 554 1 237 346 98 45 chr2 18744652 18744785 -231943069 + MIR3 SINE MIR 21 160 -48 2109 93 61 0 chr2 18746212 18746492 -231941362 + AluY SINE Alu 1 297 -14 266 143 18 0 chr2 18746762 18746818 -231941036 + L1MA8 LINE L1 6232 6288 -3 25 51 0 0 chr2 18747135 18747174 -231940680 + AT_rich Low_complexity Low_complexity 1 39 0 2026 139 27 3 chr2 18747181 18747518 -231940336 - MER7A DNA MER2_type -1 345 3 279 247 0 0 chr2 18747858 18747931 -231939923 + (CATA)n Simple_repeat Simple_repeat 4 76 0 532 289 89 31 chr2 18748062 18748287 -231939567 + MIR SINE MIR 12 249 -13 218 240 98 32 chr2 18750571 18750686 -231937168 + MIR3 SINE MIR 1 122 -110 354 322 115 6 chr2 18752335 18752509 -231935345 - MIR SINE MIR -48 214 22 199 70 23 23 chr2 18752510 18752553 -231935301 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 28341 101 8 12 chr2 18752568 18753241 -231934613 - L1PA7 LINE L1 0 6154 5479 2242 86 0 30 chr2 18753241 18753543 -231934311 - AluY SINE Alu -18 293 1 28341 101 8 12 chr2 18753543 18758208 -231929646 - L1PA7 LINE L1 -675 5479 845 2301 100 0 0 chr2 18758212 18758511 -231929343 - AluY SINE Alu -12 299 1 188 330 60 20 chr2 18758782 18758882 -231928972 + L2 LINE L2 3150 3253 -19 266 221 116 47 chr2 18759484 18759570 -231928284 + L2 LINE L2 3162 3253 -19 1875 194 145 24 chr2 18759853 18760431 -231927423 + L1MC4 LINE L1 7376 8023 -19 576 274 114 13 chr2 18760484 18760721 -231927133 + MIR SINE MIR 2 262 0 363 323 75 10 chr2 18760784 18760985 -231926869 - MIR SINE MIR -11 251 38 342 305 114 96 chr2 18763046 18763318 -231924536 + L2 LINE L2 2993 3269 -3 237 108 0 0 chr2 18764618 18764655 -231923199 + (CA)n Simple_repeat Simple_repeat 1 37 0 249 211 0 0 chr2 18767123 18767180 -231920674 + (TG)n Simple_repeat Simple_repeat 2 58 0 216 0 0 0 chr2 18767430 18767454 -231920400 + (GA)n Simple_repeat Simple_repeat 2 25 0 885 115 15 0 chr2 18768732 18768862 -231918992 + AluSg/x SINE Alu 179 310 -2 236 192 0 58 chr2 18768896 18768948 -231918906 - MER81 DNA DNA -65 49 1 356 299 98 18 chr2 18769252 18769416 -231918438 + MIR SINE MIR 2 178 -84 2082 132 0 7 chr2 18769471 18769767 -231918087 + AluSc SINE Alu 1 294 -15 207 100 0 0 chr2 18771279 18771309 -231916545 + (TG)n Simple_repeat Simple_repeat 1 30 0 205 195 0 24 chr2 18771309 18771350 -231916504 + (CATA)n Simple_repeat Simple_repeat 1 40 0 180 111 0 0 chr2 18772682 18772709 -231915145 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 355 24 0 0 chr2 18773127 18773169 -231914685 - THE1B LTR MaLR 0 364 323 2862 50 3 8 chr2 18773220 18773580 -231914274 - L1PA7 LINE L1 -2 6152 5795 2279 91 9 26 chr2 18773726 18774067 -231913787 - THE1B LTR MaLR -29 335 1 283 219 84 67 chr2 18774274 18774393 -231913461 - MIR SINE MIR -130 132 12 695 256 12 12 chr2 18774523 18774691 -231913163 + MER5B DNA MER1_type 8 175 -3 210 298 18 0 chr2 18774720 18774777 -231913077 + MIR SINE MIR 24 81 -127 257 235 20 0 chr2 18775035 18775086 -231912768 + L2 LINE L2 3221 3272 0 308 299 130 13 chr2 18776271 18776425 -231911429 - MIR SINE MIR -4 258 87 314 206 58 90 chr2 18777419 18777574 -231910280 - L1M4 LINE L1 -3864 2282 2133 23 68 0 0 chr2 18778234 18778278 -231909576 + AT_rich Low_complexity Low_complexity 1 44 0 384 364 28 7 chr2 18778335 18778478 -231909376 + MER5A DNA MER1_type 43 188 -1 500 274 94 21 chr2 18778756 18778990 -231908864 + MIR SINE MIR 6 256 -6 366 271 172 0 chr2 18779886 18780008 -231907846 + MIR3 SINE MIR 4 146 -62 207 235 0 20 chr2 18780108 18780159 -231907695 + L2 LINE L2 3264 3313 0 378 303 46 13 chr2 18780194 18780346 -231907508 + L2 LINE L2 3116 3272 0 282 172 82 41 chr2 18780637 18780759 -231907095 - L1ME4a LINE L1 -2 6119 5993 369 231 102 9 chr2 18780766 18780874 -231906980 - HAL1b LINE L1 -251 1097 980 280 277 209 34 chr2 18781309 18781457 -231906397 - MIR SINE MIR -25 237 64 491 286 50 19 chr2 18781514 18781675 -231906179 - MIR3 SINE MIR -23 185 20 180 267 95 48 chr2 18783128 18783233 -231904621 + MIR3 SINE MIR 91 200 -8 184 277 21 0 chr2 18783252 18783299 -231904555 - L3 LINE CR1 -12 1565 1518 1010 241 93 59 chr2 18783303 18783830 -231904024 - MLT1H LTR MaLR -4 545 1 395 306 62 0 chr2 18785036 18785180 -231902674 - MIR3 SINE MIR -2 206 54 180 325 84 24 chr2 18787293 18787376 -231900478 - MIR SINE MIR -76 132 45 210 239 60 60 chr2 18787966 18788033 -231899821 - L2 LINE L2 -216 3056 2425 273 328 77 31 chr2 18788873 18789068 -231898786 + L2 LINE L2 2553 2756 -558 250 308 38 32 chr2 18789336 18789521 -231898333 + MLT1J2 LTR MaLR 265 450 0 564 236 40 80 chr2 18790092 18790342 -231897512 + MIR SINE MIR 4 243 -19 6598 104 125 54 chr2 18790345 18791539 -231896315 - MER52C LTR ERV1 0 1278 1 295 274 59 0 chr2 18791900 18792002 -231895852 - MIR3 SINE MIR -8 200 93 814 288 49 10 chr2 18792041 18792448 -231895406 + L1ME4a LINE L1 5518 5940 -181 1980 141 35 0 chr2 18792558 18792842 -231895012 - AluSx SINE Alu -18 294 1 590 271 66 11 chr2 18793070 18793251 -231894603 + MIR SINE MIR 20 210 -52 978 194 188 53 chr2 18793252 18793532 -231894322 - MSTC LTR MaLR 0 428 83 2775 96 3 5 chr2 18793532 18793908 -231893946 + THE1C LTR MaLR 1 375 0 978 194 188 53 chr2 18793908 18794004 -231893850 - MSTC LTR MaLR -345 83 1 201 226 0 0 chr2 18794588 18794641 -231893213 + (TA)n Simple_repeat Simple_repeat 2 54 0 285 217 15 13 chr2 18794797 18794871 -231892983 - MER5A DNA MER1_type -44 145 61 384 353 30 8 chr2 18795402 18795535 -231892319 - MIR SINE MIR -125 137 2 30 27 0 0 chr2 18797736 18797773 -231890081 + AT_rich Low_complexity Low_complexity 1 37 0 305 250 0 0 chr2 18799106 18799174 -231888680 + MIR SINE MIR 80 147 -115 251 313 94 23 chr2 18799464 18799592 -231888262 + L2 LINE L2 3136 3272 0 792 306 16 4 chr2 18799772 18800025 -231887829 - MIR SINE MIR -4 258 5 256 358 11 11 chr2 18800912 18801007 -231886847 - MIR SINE MIR -76 132 38 1288 197 10 33 chr2 18801187 18801486 -231886368 - L1MB7 LINE L1 -16 6168 5877 1196 136 90 3 chr2 18801491 18801792 -231886062 - L1PBa LINE L1 -4241 2622 2296 321 65 0 0 chr2 18801959 18802005 -231885849 - L1MB7 LINE L1 -262 5922 5877 * 10179 108 119 18 chr2 18801995 18803821 -231884033 - L1PBa LINE L1 -4219 2644 634 1157 138 10 0 chr2 18803821 18804017 -231883837 - L1PBa LINE L1 -6663 200 3 4693 245 55 26 chr2 18804030 18806486 -231881368 - L1M4 LINE L1 -2143 4239 1619 559 249 30 6 chr2 18806465 18806630 -231881224 - L1MB8 LINE L1 -6 6408 6240 * 1334 261 53 69 chr2 18806809 18807414 -231880440 + MLT1G LTR MaLR 1 590 0 807 203 31 6 chr2 18807416 18807579 -231880275 + MIR SINE MIR 87 253 -9 277 197 15 61 chr2 18808736 18808802 -231879052 + L2 LINE L2 3210 3272 0 293 363 73 50 chr2 18809320 18809848 -231878006 - L2 LINE L2 0 3272 2736 260 312 0 0 chr2 18811360 18811437 -231876417 + MIR SINE MIR 79 155 -107 189 154 0 0 chr2 18812134 18812173 -231875681 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr2 18813161 18813183 -231874671 + AT_rich Low_complexity Low_complexity 1 22 0 807 164 6 38 chr2 18813501 18813684 -231874170 - L1MA9 LINE L1 0 6312 6136 928 180 60 0 chr2 18813685 18813902 -231873952 - L1MA9 LINE L1 -484 5828 5599 180 0 0 0 chr2 18815221 18815241 -231872613 + (TGAA)n Simple_repeat Simple_repeat 4 23 0 183 42 0 0 chr2 18815293 18815317 -231872537 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1034 330 102 45 chr2 18815323 18816343 -231871511 - L2 LINE L2 -13 3259 2175 375 149 0 0 chr2 18816486 18816560 -231871294 + (TG)n Simple_repeat Simple_repeat 2 75 0 285 314 57 9 chr2 18817969 18818074 -231869780 - L2 LINE L2 -25 3247 3138 4967 123 44 4 chr2 18818207 18819821 -231868033 - L1PA16 LINE L1 -2 6164 4531 450 324 80 27 chr2 18819935 18820160 -231867694 + L3 LINE CR1 1297 1533 -44 466 345 100 43 chr2 18821786 18822578 -231865276 - L2 LINE L2 -468 2846 2010 387 288 207 18 chr2 18822608 18823185 -231864669 + L2 LINE L2 2475 3142 -171 306 250 48 12 chr2 18823196 18823280 -231864574 - MIR SINE MIR -21 241 155 277 220 195 0 chr2 18823281 18823399 -231864455 - MLT2E LTR ERVL 0 628 488 366 289 35 28 chr2 18823492 18823634 -231864220 - MLT2E LTR ERVL -456 172 30 474 300 27 7 chr2 18823681 18823831 -231864023 - MIR SINE MIR -105 157 5 219 320 0 0 chr2 18823876 18823926 -231863928 + L2 LINE L2 3203 3252 -20 1021 158 0 6 chr2 18824058 18824241 -231863613 + L1PB1 LINE L1 3 184 -6679 * 13826 187 20 11 chr2 18824227 18825746 -231862108 + L1PB1 LINE L1 1894 3398 -3469 2163 139 3 0 chr2 18825746 18826056 -231861798 + AluSq SINE Alu 1 311 -2 13826 187 20 11 chr2 18826056 18829415 -231858439 + L1PB1 LINE L1 3398 6867 0 1261 253 41 41 chr2 18829785 18830365 -231857489 - L1ME3 LINE L1 -19 6143 5476 677 213 33 81 chr2 18830568 18830779 -231857075 - L1ME2 LINE L1 -8 6156 5956 185 296 19 0 chr2 18831388 18831442 -231856412 + MIR SINE MIR 85 139 -69 43212 38 27 1 chr2 18832372 18837641 -231850213 - L1P LINE L1 -743 5403 2 192 200 0 0 chr2 18837726 18837766 -231850088 + CT-rich Low_complexity Low_complexity 2 41 0 363 265 81 0 chr2 18838470 18838606 -231849248 + MIR SINE MIR 101 247 -15 1413 110 0 55 chr2 18839091 18839310 -231848544 + AluSq SINE Alu 1 207 -106 317 62 21 0 chr2 18839337 18839385 -231848469 + (TG)n Simple_repeat Simple_repeat 2 50 0 395 250 189 14 chr2 18839580 18839728 -231848126 - MIR SINE MIR -19 243 70 625 250 45 17 chr2 18840405 18840581 -231847273 - MIR SINE MIR -76 186 6 1377 223 63 17 chr2 18840769 18841119 -231846735 + MLT1A2 LTR MaLR 1 593 0 190 293 85 49 chr2 18841141 18841223 -231846631 + L2 LINE L2 3186 3270 -43 322 297 36 86 chr2 18841883 18842186 -231845668 - L3 LINE CR1 -45 1532 1245 272 246 72 0 chr2 18842246 18842315 -231845539 + MER91B DNA MER1_type 3 76 -114 204 324 183 23 chr2 18842393 18842612 -231845242 - L3 LINE CR1 -342 1235 982 269 373 65 0 chr2 18842777 18842930 -231844924 + L2 LINE L2 3104 3266 -6 2540 56 0 37 chr2 18846525 18846847 -231841007 - AluY SINE Alu -1 310 1 412 330 54 27 chr2 18847157 18847378 -231840476 + MIR SINE MIR 20 246 -16 2362 88 7 10 chr2 18847400 18847708 -231840146 - AluSp SINE Alu -6 307 1 186 43 0 0 chr2 18847822 18847845 -231840009 + (TG)n Simple_repeat Simple_repeat 2 24 0 208 277 62 27 chr2 18848587 18848699 -231839155 + MIR SINE MIR 73 188 -74 385 278 25 56 chr2 18848817 18848979 -231838875 - MIR3 SINE MIR -17 191 35 2436 268 96 18 chr2 18849594 18850839 -231837015 - L1MEc LINE L1 -1730 4485 3143 314 284 128 35 chr2 18850835 18850976 -231836878 - L1MEc LINE L1 -4719 1677 1524 * 803 333 25 11 chr2 18850987 18851347 -231836507 + HERVL LTR ERVL 3903 4267 -1387 556 279 60 60 chr2 18851564 18851833 -231836021 + LTR33 LTR ERVL 1 269 -252 303 291 47 0 chr2 18851915 18852001 -231835853 + LTR33 LTR ERVL 298 387 -134 359 238 0 49 chr2 18852195 18852317 -231835537 - MIR SINE MIR -28 234 119 775 256 74 9 chr2 18852418 18852648 -231835206 + MIR SINE MIR 7 251 -11 288 0 0 0 chr2 18854307 18854339 -231833515 + (TC)n Simple_repeat Simple_repeat 2 33 0 261 0 0 0 chr2 18854361 18854390 -231833464 + (GA)n Simple_repeat Simple_repeat 2 30 0 2121 113 3 36 chr2 18854434 18854743 -231833111 + AluSx SINE Alu 1 299 -13 324 0 0 0 chr2 18857163 18857199 -231830655 + (TG)n Simple_repeat Simple_repeat 2 37 0 5757 118 0 14 chr2 18857685 18859454 -231828400 - L1PA13 LINE L1 0 6163 4398 403 292 7 21 chr2 18861072 18861232 -231826622 + MIR SINE MIR 24 141 -67 965 137 0 7 chr2 18861547 18861700 -231826154 - L1MB1 LINE L1 -291 5898 5747 2036 151 19 35 chr2 18861700 18862070 -231825784 + L1MA9 LINE L1 5947 6312 0 182 340 111 30 chr2 18862230 18862374 -231825480 + L2 LINE L2 3032 3204 -109 15927 127 8 0 chr2 18862374 18863428 -231824426 + L1PA8 LINE L1 2954 3998 -2174 2369 85 0 38 chr2 18863428 18863747 -231824107 + AluY SINE Alu 1 307 -4 15927 127 8 0 chr2 18863747 18865921 -231821933 + L1PA8 LINE L1 3998 6167 -5 182 340 111 30 chr2 18865921 18866011 -231821843 + L2 LINE L2 3204 3285 -28 1728 165 3 26 chr2 18866748 18867051 -231820803 - AluJo SINE Alu -16 296 1 501 309 124 24 chr2 18867193 18867523 -231820331 - LTR33 LTR ERVL -57 464 102 237 341 38 15 chr2 18868372 18868504 -231819350 - MIR3 SINE MIR -15 193 59 835 321 21 0 chr2 18868906 18869149 -231818705 - MIR SINE MIR 0 262 15 934 169 27 126 chr2 18869285 18869546 -231818308 + L1PA15 LINE L1 5931 6165 0 485 242 44 50 chr2 18869947 18870129 -231817725 + MIR3 SINE MIR 16 196 -12 271 292 31 54 chr2 18870752 18870882 -231816972 - MIR SINE MIR -64 144 18 2100 161 8 40 chr2 18870927 18871281 -231816573 - MER61A LTR ERV1 0 343 1 525 276 63 23 chr2 18871731 18871905 -231815949 + MIR SINE MIR 2 182 -80 801 64 0 0 chr2 18871955 18872049 -231815805 + AluSc SINE Alu 2 95 -214 1388 105 21 0 chr2 18872188 18872378 -231815476 + AluSg/x SINE Alu 97 290 -20 237 146 24 61 chr2 18873263 18873299 -231814555 + (CATA)n Simple_repeat Simple_repeat 1 37 -388 2564 65 0 31 chr2 18873299 18873621 -231814233 + AluSq SINE Alu 1 312 -1 237 146 24 61 chr2 18873621 18873705 -231814149 + (CATA)n Simple_repeat Simple_repeat 37 425 0 5581 164 17 25 chr2 18873771 18875321 -231812533 - L1MA4 LINE L1 0 6300 4766 741 299 105 30 chr2 18875409 18876010 -231811844 - L1MC4a LINE L1 -1901 5907 5262 380 274 10 10 chr2 18876174 18876276 -231811578 - MER5A DNA MER1_type -79 110 9 570 267 83 24 chr2 18877103 18877345 -231810509 + MLT1J1 LTR MaLR 1 250 -200 236 306 83 0 chr2 18879048 18879156 -231808698 - L2 LINE L2 0 3313 3197 598 313 28 0 chr2 18881518 18881697 -231806157 + MIR SINE MIR 78 261 -1 3942 151 39 0 chr2 18881728 18882364 -231805490 - L1MC1 LINE L1 -1 6332 5672 7872 30 4 0 chr2 18882980 18884208 -231803646 - L1PA4 LINE L1 -4 6151 4917 2380 45 0 0 chr2 18884210 18884499 -231803355 + L1PA4 LINE L1 4605 4893 -1253 216 318 0 71 chr2 18884950 18885076 -231802778 + MIR3 SINE MIR 63 179 -29 6090 119 6 4 chr2 18885147 18886065 -231801789 - L1PB2 LINE L1 0 6151 5232 186 241 111 65 chr2 18886783 18886891 -231800963 - MIR SINE MIR -51 211 99 212 257 14 68 chr2 18887721 18887795 -231800059 - MIR SINE MIR -104 158 89 207 0 0 0 chr2 18888156 18888179 -231799675 + (T)n Simple_repeat Simple_repeat 1 23 0 226 237 26 26 chr2 18888396 18888472 -231799382 - L2 LINE L2 -4 3268 3193 6351 48 10 11 chr2 18888649 18889315 -231798539 - L1PA7 LINE L1 -2 6152 5486 2204 93 0 35 chr2 18889315 18889626 -231798228 - AluY SINE Alu -11 300 1 6351 48 10 11 chr2 18889626 18889748 -231798106 - L1PA7 LINE L1 -668 5486 5365 1125 92 30 0 chr2 18889746 18889910 -231797944 + L1PA7 LINE L1 5208 5376 -770 * 195 316 161 35 chr2 18890023 18890365 -231797489 - L2 LINE L2 -825 2489 2105 186 133 0 0 chr2 18891365 18891395 -231796459 + (ATGGTG)n Simple_repeat Simple_repeat 6 35 0 305 214 29 57 chr2 18893417 18893487 -231794367 + MLT1K LTR MaLR 179 246 -342 509 265 174 10 chr2 18894216 18894412 -231793442 - MIR SINE MIR -25 237 10 26 0 0 0 chr2 18894419 18894445 -231793409 + AT_rich Low_complexity Low_complexity 1 26 0 404 169 0 26 chr2 18894901 18894978 -231792876 + L1MA6 LINE L1 6226 6300 0 25 0 0 0 chr2 18894994 18895019 -231792835 + AT_rich Low_complexity Low_complexity 1 25 0 357 285 97 21 chr2 18896279 18896423 -231791431 - MIR3 SINE MIR -13 195 41 2046 141 3 0 chr2 18897471 18897770 -231790084 + AluSx SINE Alu 1 300 -12 396 259 107 8 chr2 18897829 18897960 -231789894 - MLT1H LTR MaLR 0 549 406 180 0 0 0 chr2 18897991 18898011 -231789843 + (TC)n Simple_repeat Simple_repeat 2 21 0 * 450 0 0 0 chr2 18898010 18898060 -231789794 + (TG)n Simple_repeat Simple_repeat 1 50 0 433 227 0 0 chr2 18898131 18898219 -231789635 - MLT1H LTR MaLR -381 168 81 1924 186 194 16 chr2 18899635 18900064 -231787790 - MLT1D LTR MaLR 0 505 1 432 190 5 9 chr2 18900195 18900302 -231787552 + L1MA9 LINE L1 6187 6291 0 2036 42 0 8 chr2 18901507 18901747 -231786107 + L1PA4 LINE L1 5917 6154 -1 510 220 62 14 chr2 18902629 18902784 -231785070 - MER5A DNA MER1_type -8 170 5 2144 129 0 25 chr2 18903198 18903516 -231784338 + AluSx SINE Alu 2 311 -1 218 327 45 36 chr2 18903699 18903809 -231784045 - L2 LINE L2 -4 3268 3158 298 252 157 34 chr2 18906571 18906718 -231781136 - MIR3 SINE MIR -4 204 40 486 49 0 0 chr2 18907261 18907322 -231780532 + (TG)n Simple_repeat Simple_repeat 1 61 0 183 345 103 9 chr2 18909164 18909280 -231778574 - L2 LINE L2 0 3272 3146 426 213 11 21 chr2 18909467 18909561 -231778293 + MER96 DNA MER1_type? 1 93 -82 255 262 145 14 chr2 18909592 18909737 -231778117 + MIR SINE MIR 98 261 -1 515 275 84 48 chr2 18909881 18910132 -231777722 + MIR SINE MIR 3 262 0 2190 116 17 0 chr2 18910385 18910686 -231777168 + AluSq SINE Alu 1 306 -7 31 68 0 0 chr2 18910712 18910771 -231777083 + AT_rich Low_complexity Low_complexity 1 59 0 647 136 19 39 chr2 18910793 18910896 -231776958 - FLAM_A SINE Alu -21 121 21 315 71 0 0 chr2 18911642 18911684 -231776170 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 2189 125 7 0 chr2 18912796 18913099 -231774755 - AluSx SINE Alu -7 305 1 373 234 65 19 chr2 18913269 18913376 -231774478 - MIR SINE MIR -148 114 3 602 307 120 26 chr2 18913601 18914093 -231773761 + L1ME4a LINE L1 5582 6119 -2 347 291 0 0 chr2 18915564 18915667 -231772187 + MIR SINE MIR 137 239 -23 208 344 16 0 chr2 18916834 18916898 -231770956 - L2 LINE L2 -82 3190 3126 309 283 133 9 chr2 18917737 18917850 -231770004 - MIR SINE MIR -14 248 122 384 281 82 15 chr2 18919782 18919917 -231767937 - MIR3 SINE MIR -34 174 31 21 36 0 0 chr2 18920286 18920314 -231767540 + AT_rich Low_complexity Low_complexity 1 28 0 540 179 47 0 chr2 18920376 18920482 -231767372 - MLT1H LTR MaLR -2 547 437 887 280 58 18 chr2 18920550 18920825 -231767029 - MLT1H LTR MaLR -252 297 12 453 279 7 14 chr2 18921577 18921717 -231766137 + MIR SINE MIR 118 256 -6 336 64 0 0 chr2 18922607 18922654 -231765200 + (CA)n Simple_repeat Simple_repeat 2 48 0 1983 269 30 31 chr2 18924089 18924666 -231763188 + MLT1E LTR MaLR 9 584 -9 993 226 34 64 chr2 18924667 18924711 -231763143 - MLT2C2 LTR ERVL 0 464 420 357 24 0 0 chr2 18924711 18924753 -231763101 + (CA)n Simple_repeat Simple_repeat 2 43 0 993 226 34 64 chr2 18924753 18925130 -231762724 - MLT2C2 LTR ERVL -44 420 1 210 37 0 0 chr2 18926186 18926213 -231761641 + (GA)n Simple_repeat Simple_repeat 2 28 0 2123 113 7 0 chr2 18927615 18927934 -231759920 + AluSq SINE Alu 2 313 0 696 277 30 20 chr2 18928185 18928387 -231759467 + MIR SINE MIR 49 252 -10 187 212 40 121 chr2 18929792 18929891 -231757963 - L2 LINE L2 -215 3057 2967 354 281 23 39 chr2 18930563 18930691 -231757163 - MIR SINE MIR -65 143 18 245 319 85 0 chr2 18930735 18930829 -231757025 - MIR SINE MIR -92 170 69 559 50 4 1 chr2 18930829 18930911 -231756943 - MSTA LTR MaLR 0 428 357 10455 40 4 1 chr2 18930911 18932253 -231755601 - L1PA5 LINE L1 -962 5184 3839 7594 29 5 1 chr2 18932253 18933214 -231754640 + L1PA5 LINE L1 5198 6154 0 1536 145 108 65 chr2 18933214 18933566 -231754288 - MSTA LTR MaLR -59 369 3 218 343 0 15 chr2 18933566 18933633 -231754221 - MIR SINE MIR -187 75 10 349 316 150 32 chr2 18933658 18933905 -231753949 + L3 LINE CR1 1290 1565 -12 25 31 0 0 chr2 18935004 18935036 -231752818 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 18935224 18935263 -231752591 + AT_rich Low_complexity Low_complexity 1 39 0 187 264 0 19 chr2 18935949 18936002 -231751852 - L2 LINE L2 -1 3312 3261 304 273 65 65 chr2 18936042 18936181 -231751673 + MIR SINE MIR 110 248 -14 1986 146 3 3 chr2 18936492 18936780 -231751074 - AluJb SINE Alu -6 306 19 356 333 0 90 chr2 18936877 18937078 -231750776 - L2 LINE L2 -1 3271 3089 233 318 39 39 chr2 18941898 18942027 -231745827 + MLT1L LTR MaLR 148 276 -339 31 44 0 0 chr2 18942440 18942485 -231745369 + AT_rich Low_complexity Low_complexity 1 45 0 4318 30 4 4 chr2 18942485 18943010 -231744844 - L1PA2 LINE L1 0 6155 5631 194 323 92 67 chr2 18943672 18943836 -231744018 - L2 LINE L2 -9 3304 3137 715 229 19 0 chr2 18943997 18944154 -231743700 + Tigger4(Zombi) DNA MER2_type 1 160 -2571 * 3077 125 12 14 chr2 18944152 18944663 -231743191 + Tigger4(Zombi) DNA MER2_type 2222 2731 0 2024 256 52 20 chr2 18944663 18945222 -231742632 - MLT1G1 LTR MaLR -16 579 3 4466 230 15 19 chr2 18945223 18946621 -231741233 - L1M4 LINE L1 -1947 4199 2807 324 326 35 18 chr2 18947332 18947468 -231740386 - MIR SINE MIR -57 151 11 21 36 0 0 chr2 18947813 18947841 -231740013 + AT_rich Low_complexity Low_complexity 1 28 0 656 298 78 81 chr2 18950352 18951044 -231736810 - L1M4 LINE L1 -1014 5132 4443 529 275 26 10 chr2 18951161 18951354 -231736500 - LTR33 LTR ERVL 0 521 326 322 211 53 0 chr2 18951537 18951613 -231736241 - LTR33 LTR ERVL -435 86 7 227 316 62 42 chr2 18951627 18951915 -231735939 - L1M4 LINE L1 -1868 4278 3985 27 49 0 0 chr2 18952046 18952087 -231735767 + AT_rich Low_complexity Low_complexity 1 41 0 276 362 47 24 chr2 18952422 18952549 -231735305 + L2 LINE L2 3184 3313 0 636 304 57 17 chr2 18953462 18953692 -231734162 - MIR SINE MIR -4 258 20 304 316 94 8 chr2 18953826 18953943 -231733911 + L2 LINE L2 3146 3272 0 225 0 0 0 chr2 18954086 18954111 -231733743 + (T)n Simple_repeat Simple_repeat 1 25 0 376 346 74 84 chr2 18956075 18956384 -231731470 - L2 LINE L2 0 3272 2967 3699 251 62 17 chr2 18956465 18957846 -231730008 + L1M4 LINE L1 2798 4240 -1906 1066 168 5 0 chr2 18957869 18958066 -231729788 + L1PB3 LINE L1 3 200 -6663 13185 163 59 26 chr2 18958066 18964086 -231723768 + L1PB3 LINE L1 634 6870 0 2634 153 30 32 chr2 18964164 18964732 -231723122 + L1MC2 LINE L1 5762 6328 -16 273 321 8 61 chr2 18964970 18965101 -231722753 + MIR3 SINE MIR 9 132 -76 1057 196 28 49 chr2 18965156 18965483 -231722371 + MER33 DNA MER1_type 1 320 -4 222 37 0 0 chr2 18966566 18966593 -231721261 + (CA)n Simple_repeat Simple_repeat 2 28 0 468 310 30 84 chr2 18966834 18967131 -231720723 + L2 LINE L2 2992 3272 0 21 0 0 0 chr2 18967989 18968010 -231719844 + AT_rich Low_complexity Low_complexity 1 21 0 189 286 20 0 chr2 18968320 18968369 -231719485 + MER5A DNA MER1_type 4 53 -136 292 316 187 0 chr2 18969345 18969500 -231718354 + MIR SINE MIR 36 219 -43 21 71 0 0 chr2 18970424 18970466 -231717388 + AT_rich Low_complexity Low_complexity 1 42 0 371 195 8 59 chr2 18970755 18970873 -231716981 - L1MA9 LINE L1 -38 6274 6163 537 209 17 28 chr2 18971784 18971921 -231715933 + MSTC LTR MaLR 1 134 -231 2822 92 97 0 chr2 18971921 18972293 -231715561 + MLT2A2 LTR ERVL 3 420 -33 249 33 0 0 chr2 18972293 18972323 -231715531 + (TA)n Simple_repeat Simple_repeat 2 31 0 2822 92 97 0 chr2 18972323 18972361 -231715493 + MLT2A2 LTR ERVL 420 453 0 537 209 17 28 chr2 18972361 18972380 -231715474 + MSTC LTR MaLR 134 152 -213 1332 122 4 4 chr2 18972380 18972610 -231715244 + L1MA4 LINE L1 5835 6064 -236 1447 194 8 0 chr2 18972623 18972875 -231714979 + AluJb SINE Alu 13 266 -46 240 35 0 0 chr2 18972881 18972910 -231714944 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1355 139 0 4 chr2 18972911 18973163 -231714691 + L1MA4 LINE L1 6050 6300 0 481 184 28 9 chr2 18973290 18973399 -231714455 + MSTC LTR MaLR 280 390 -6 517 290 101 53 chr2 18974557 18975143 -231712711 - L1ME3A LINE L1 -264 5906 5293 316 360 46 10 chr2 18975153 18975350 -231712504 - L1ME3A LINE L1 -876 5270 5067 20688 30 4 0 chr2 18975829 18979094 -231708760 - L1PA3 LINE L1 -3 6152 2878 17802 37 0 2 chr2 18979095 18981613 -231706241 + L1PA3 LINE L1 374 2884 -3262 4601 181 23 20 chr2 18981746 18983327 -231704527 + L1MA9 LINE L1 4696 6274 -38 188 269 134 60 chr2 18983842 18983976 -231703878 - L2 LINE L2 -160 3112 2969 403 336 16 55 chr2 18984821 18985187 -231702667 - MLT1I LTR MaLR -18 391 40 270 313 148 13 chr2 18985293 18985523 -231702331 + MIR SINE MIR 2 262 0 224 296 70 0 chr2 18985866 18985937 -231701917 + MIR SINE MIR 39 114 -94 421 208 0 50 chr2 18986451 18986610 -231701244 + L1M4 LINE L1 5176 5326 -820 311 232 37 46 chr2 18986675 18986833 -231701021 + L1MB1 LINE L1 5272 5436 -726 539 204 17 99 chr2 18986866 18986964 -231700890 + Tigger2 DNA MER2_type 2543 2621 -87 826 146 8 0 chr2 18986964 18987094 -231700760 + FLAM_C SINE Alu 3 133 0 539 204 17 99 chr2 18987094 18987176 -231700678 + Tigger2 DNA MER2_type 2621 2708 0 384 252 19 0 chr2 18987176 18987283 -231700571 + L1ME1 LINE L1 6053 6161 -5 1673 149 69 0 chr2 18987529 18987805 -231700049 - AluJb SINE Alu -12 300 6 6930 179 52 36 chr2 18987810 18989721 -231698133 - L1MC3 LINE L1 -743 5403 4941 307 227 60 60 chr2 18989730 18989880 -231697974 - L1M4 LINE L1 -812 5334 5185 378 300 52 70 chr2 18989977 18990360 -231697494 - L1M4 LINE L1 -978 5168 4793 2298 173 9 19 chr2 18990475 18990938 -231696916 + L1MB1 LINE L1 5559 6016 -152 2264 93 3 51 chr2 18990938 18991313 -231696541 + MER4A LTR ERV1 1 357 -307 1975 142 13 28 chr2 18991285 18991438 -231696416 + MER4A LTR ERV1 176 330 -334 * 2386 166 51 5 chr2 18991438 18991847 -231696007 + MSTA LTR MaLR 1 428 0 8924 175 22 19 chr2 18991847 18993493 -231694361 + MSTA-int LTR MaLR 1 1651 0 2552 128 54 7 chr2 18993493 18993900 -231693954 + MSTA LTR MaLR 1 426 -2 1975 142 13 28 chr2 18993900 18994129 -231693725 + MER4A LTR ERV1 327 664 0 500 142 228 0 chr2 18994129 18994256 -231693598 + L1MB1 LINE L1 6013 6168 0 353 273 143 33 chr2 18994275 18994473 -231693381 - L1M4 LINE L1 -1511 4635 4460 490 9 103 0 chr2 18994473 18994580 -231693274 + (TA)n Simple_repeat Simple_repeat 2 119 0 353 273 143 33 chr2 18994580 18994865 -231692989 - L1M4 LINE L1 -1686 4460 4099 1918 314 113 10 chr2 18995137 18995945 -231691909 - L2 LINE L2 -2389 925 35 315 208 0 83 chr2 18996326 18996422 -231691432 - L1P LINE L1 -2471 3675 3588 714 293 118 48 chr2 18996551 18997069 -231690785 - L1M4 LINE L1 -2644 3502 2949 276 97 39 48 chr2 18997254 18997357 -231690497 + (TA)n Simple_repeat Simple_repeat 2 103 0 196 263 137 11 chr2 18997729 18997824 -231690030 + MIR SINE MIR 124 230 -32 536 0 16 0 chr2 18997920 18997984 -231689870 + (ATATG)n Simple_repeat Simple_repeat 3 67 0 1846 133 105 12 chr2 18997987 18998319 -231689535 + THE1B LTR MaLR 2 364 0 1984 134 13 35 chr2 18998576 18998889 -231688965 - AluSx SINE Alu -6 306 1 423 0 0 0 chr2 19000725 19000772 -231687082 + (TG)n Simple_repeat Simple_repeat 1 47 0 2122 89 6 86 chr2 19003032 19003357 -231684497 - AluSc SINE Alu -10 299 1 362 281 21 0 chr2 19003448 19003544 -231684310 - L1MC4 LINE L1 -1339 6703 6606 305 211 119 9 chr2 19004040 19004149 -231683705 + MER103 DNA DNA 46 166 0 24 0 0 0 chr2 19004312 19004336 -231683518 + AT_rich Low_complexity Low_complexity 1 24 0 288 53 0 0 chr2 19004404 19004442 -231683412 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 486 312 39 13 chr2 19005259 19005413 -231682441 - MIR SINE MIR -98 164 7 529 266 60 64 chr2 19006102 19006163 -231681691 + MIR SINE MIR 12 72 -190 1817 156 0 33 chr2 19006163 19006465 -231681389 - AluSx SINE Alu -20 292 1 529 266 60 64 chr2 19006465 19006621 -231681233 + MIR SINE MIR 72 228 -34 400 280 92 19 chr2 19007255 19007488 -231680366 - L1MC4 LINE L1 -786 5360 5189 383 282 123 43 chr2 19007721 19007940 -231679914 - L1M4 LINE L1 -3201 2945 2690 2566 218 30 32 chr2 19007940 19008565 -231679289 - MLT1E3 LTR MaLR 0 624 1 383 282 123 43 chr2 19008565 19008671 -231679183 - L1M4 LINE L1 -3456 2690 2594 235 111 19 19 chr2 19008809 19008863 -231678991 + (TA)n Simple_repeat Simple_repeat 2 55 0 214 191 24 0 chr2 19009083 19009125 -231678729 + CT-rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr2 19009142 19009163 -231678691 + (CA)n Simple_repeat Simple_repeat 2 22 0 244 284 84 21 chr2 19009254 19009349 -231678505 + L2 LINE L2 3211 3311 -2 31 44 0 0 chr2 19009449 19009494 -231678360 + AT_rich Low_complexity Low_complexity 1 45 0 580 261 27 49 chr2 19009524 19009708 -231678146 + L2 LINE L2 2564 2743 -571 225 290 16 0 chr2 19009741 19009803 -231678051 - MER94 DNA DNA -2 132 70 187 360 41 29 chr2 19010756 19010928 -231676926 - L2 LINE L2 -173 3099 2926 296 377 33 25 chr2 19011447 19011569 -231676285 + MIR3 SINE MIR 3 125 -83 381 22 0 0 chr2 19012482 19012528 -231675326 + (TG)n Simple_repeat Simple_repeat 1 46 0 456 67 0 0 chr2 19012763 19012823 -231675031 + (CA)n Simple_repeat Simple_repeat 2 61 0 667 173 53 0 chr2 19014316 19014466 -231673388 - L1MA8 LINE L1 -2 6289 6132 207 418 28 14 chr2 19016227 19016368 -231671486 + L2 LINE L2 3128 3270 -2 249 83 0 0 chr2 19017678 19017714 -231670140 + (TC)n Simple_repeat Simple_repeat 2 37 0 21 36 0 0 chr2 19018064 19018092 -231669762 + AT_rich Low_complexity Low_complexity 1 28 0 236 320 53 0 chr2 19018401 19018476 -231669378 - MIR3 SINE MIR -19 189 111 842 152 71 49 chr2 19018479 19018663 -231669191 + MLT1D LTR MaLR 1 188 -317 369 331 51 0 chr2 19020371 19020528 -231667326 - MIR3 SINE MIR -43 165 1 2051 123 53 39 chr2 19020783 19021142 -231666712 - THE1B LTR MaLR 0 364 1 271 149 0 184 chr2 19021567 19021654 -231666200 + MLT1F1 LTR MaLR 49 119 -448 1418 237 169 4 chr2 19021654 19022169 -231665685 + L1MD3 LINE L1 7396 7995 0 274 311 66 42 chr2 19022373 19022540 -231665314 + L2 LINE L2 2100 2270 -1044 1109 218 146 11 chr2 19022556 19022905 -231664949 + MSTD LTR MaLR 1 396 0 279 307 93 80 chr2 19022905 19023641 -231664213 + L2 LINE L2 2295 3037 -235 250 258 16 0 chr2 19023641 19023703 -231664151 - MIR SINE MIR -131 131 69 292 289 158 26 chr2 19025145 19025259 -231662595 - L2 LINE L2 -10 3262 3134 2173 106 116 64 chr2 19025612 19026019 -231661835 + MSTA LTR MaLR 1 428 0 344 271 83 42 chr2 19026855 19026999 -231660855 + MIR3 SINE MIR 1 150 -58 209 302 48 0 chr2 19027043 19027106 -231660748 - MIR SINE MIR -83 125 60 594 279 153 13 chr2 19027913 19028142 -231659712 - MIR SINE MIR 0 262 2 3586 273 70 60 chr2 19028156 19030555 -231657299 - HAL1 LINE L1 -37 2470 47 4059 159 28 44 chr2 19032208 19032685 -231655169 + L1MC3 LINE L1 6954 7391 -394 2279 181 24 2 chr2 19032685 19033104 -231654750 - MSTA LTR MaLR 0 428 1 4059 159 28 44 chr2 19033104 19033493 -231654361 + L1MC3 LINE L1 7391 7785 0 284 173 25 25 chr2 19033717 19033798 -231654056 + (TA)n Simple_repeat Simple_repeat 2 82 0 189 107 0 0 chr2 19034588 19034616 -231653238 + (TTA)n Simple_repeat Simple_repeat 3 30 0 1138 196 5 27 chr2 19034777 19034945 -231652909 - MLT1D LTR MaLR 0 505 342 2202 133 19 30 chr2 19034945 19035313 -231652541 - THE1B LTR MaLR 0 364 1 1138 196 5 27 chr2 19035313 19035368 -231652486 - MLT1D LTR MaLR -163 342 287 308 281 94 0 chr2 19035740 19035836 -231652018 - MIR SINE MIR -102 160 56 191 242 0 91 chr2 19036405 19036471 -231651383 + L2 LINE L2 3210 3269 -3 567 274 11 40 chr2 19037054 19037229 -231650625 + MER5B DNA MER1_type 1 170 -8 850 187 22 0 chr2 19037780 19037919 -231649935 - MER5A DNA MER1_type -47 142 1 2109 92 0 25 chr2 19038035 19038317 -231649537 - AluSx SINE Alu -1 311 37 1998 118 45 0 chr2 19039548 19039835 -231648019 + AluSx SINE Alu 1 300 -12 25 51 0 0 chr2 19040101 19040140 -231647714 + AT_rich Low_complexity Low_complexity 1 39 0 913 290 50 30 chr2 19042312 19043046 -231644808 + L1MDb LINE L1 1117 2008 -4579 22 35 0 0 chr2 19043190 19043219 -231644635 + AT_rich Low_complexity Low_complexity 1 29 0 929 169 0 0 chr2 19043565 19043707 -231644147 + AluSg/x SINE Alu 135 276 -34 225 0 0 0 chr2 19043709 19043734 -231644120 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1070 269 18 66 chr2 19043734 19044291 -231643563 + L1MDb LINE L1 2553 3082 -3324 634 200 64 0 chr2 19044293 19044418 -231643436 + FLAM_C SINE Alu 3 135 -8 1220 279 84 25 chr2 19044420 19045174 -231642680 + L1MDb LINE L1 3070 3867 -2539 2135 258 81 30 chr2 19045488 19046447 -231641407 + L1MDb LINE L1 3916 4923 -1483 973 142 74 16 chr2 19046465 19046655 -231641199 - L1MC3 LINE L1 0 7785 7585 471 266 19 44 chr2 19046669 19046827 -231641027 + L1MDb LINE L1 4965 5118 -1288 317 250 83 45 chr2 19047070 19047202 -231640652 - L1MEd LINE L1 -1333 1157 967 416 339 44 39 chr2 19047641 19048004 -231639850 + L1MEc LINE L1 34 398 -5998 1683 208 34 12 chr2 19048004 19048356 -231639498 - MLT1A1 LTR MaLR 0 365 4 330 250 0 37 chr2 19048452 19048560 -231639294 + L1MEc LINE L1 462 565 -5831 241 302 146 19 chr2 19048949 19049154 -231638700 + MIR SINE MIR 32 262 0 201 208 38 19 chr2 19049181 19049234 -231638620 + L2 LINE L2 3205 3258 -14 228 330 21 0 chr2 19049283 19049377 -231638477 + MIR SINE MIR 37 132 -76 29 0 0 0 chr2 19050409 19050438 -231637416 + AT_rich Low_complexity Low_complexity 1 29 0 675 111 52 31 chr2 19050542 19050854 -231637000 + GA-rich Low_complexity Low_complexity 1 318 0 515 292 90 35 chr2 19051681 19052192 -231635662 + L1M4 LINE L1 3417 3955 -2191 371 283 105 55 chr2 19052426 19052714 -231635140 - L1MDa LINE L1 -1527 4553 4281 1490 206 25 55 chr2 19052714 19053078 -231634776 - MLT1B LTR MaLR -4 386 33 231 36 0 0 chr2 19053078 19053106 -231634748 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1490 206 25 55 chr2 19053106 19053139 -231634715 - MLT1B LTR MaLR -357 33 1 371 283 105 55 chr2 19053139 19053376 -231634478 - L1MDa LINE L1 -1799 4281 4002 2681 33 0 0 chr2 19053535 19053836 -231634018 + AluY SINE Alu 1 301 -10 276 270 0 0 chr2 19055123 19055197 -231632657 - L1MDa LINE L1 -2193 3887 3814 354 289 80 47 chr2 19055233 19055447 -231632407 - L1MDa LINE L1 -2826 3254 3049 7535 34 0 0 chr2 19055447 19056687 -231631167 - L1PA4 LINE L1 -1 6154 4915 354 289 80 47 chr2 19056687 19057200 -231630654 - L1MDa LINE L1 -3031 3049 2503 386 245 39 0 chr2 19057249 19057351 -231630503 - L1MDa LINE L1 -4840 1240 1135 1208 201 62 45 chr2 19057359 19057778 -231630076 - L1MDa LINE L1 -5014 1056 631 230 225 0 38 chr2 19058529 19058609 -231629245 + L1MC5 LINE L1 7831 7907 -54 22 0 0 0 chr2 19058615 19058637 -231629217 + AT_rich Low_complexity Low_complexity 1 22 0 293 199 99 153 chr2 19058704 19058835 -231629019 + MIR SINE MIR 7 130 -132 269 269 15 0 chr2 19058836 19058903 -231628951 + CT-rich Low_complexity Low_complexity 3 70 0 263 306 30 97 chr2 19059255 19059302 -231628552 + L2 LINE L2 3134 3183 -89 1882 159 3 13 chr2 19059302 19059610 -231628244 + AluJo SINE Alu 1 305 -7 263 306 30 97 chr2 19059610 19059696 -231628158 + L2 LINE L2 3183 3258 -14 186 309 49 81 chr2 19059702 19059825 -231628029 + MIR SINE MIR 110 228 -34 1954 118 48 3 chr2 19060019 19060308 -231627546 - AluSg SINE Alu -8 302 1 2458 78 3 0 chr2 19060630 19060939 -231626915 + AluY SINE Alu 1 310 -1 1172 189 9 30 chr2 19062273 19062506 -231625348 - AluJo SINE Alu -3 309 82 32 0 0 0 chr2 19065147 19065179 -231622675 + AT_rich Low_complexity Low_complexity 1 32 0 463 323 31 31 chr2 19065272 19065467 -231622387 - MIR SINE MIR -66 196 2 1914 201 31 72 chr2 19065548 19066035 -231621819 + MLT1D LTR MaLR 3 469 -36 273 302 52 48 chr2 19066476 19066939 -231620915 + L1M4 LINE L1 4390 4854 -1292 337 301 26 21 chr2 19067029 19067222 -231620632 + L1M4 LINE L1 4860 5053 -1093 21 36 0 0 chr2 19067333 19067361 -231620493 + AT_rich Low_complexity Low_complexity 1 28 0 307 324 46 83 chr2 19067431 19067672 -231620182 - HAL1b LINE L1 -1005 343 112 32 43 0 0 chr2 19068649 19068695 -231619159 + AT_rich Low_complexity Low_complexity 1 46 0 396 284 67 120 chr2 19069016 19069524 -231618330 + LTR67 LTR ERVL 36 516 -41 716 155 20 147 chr2 19069737 19069989 -231617865 + L1MB8 LINE L1 5901 6120 -58 4937 94 12 1 chr2 19070004 19070696 -231617158 - L1PA13 LINE L1 -23 6140 5442 702 112 105 21 chr2 19070724 19070867 -231616987 + MER53 DNA DNA 35 189 0 592 241 21 7 chr2 19071323 19071464 -231616390 - MLT1G1 LTR MaLR -447 148 6 313 254 80 51 chr2 19072120 19072396 -231615458 + L1MC/D LINE L1 4042 4325 -1821 315 359 41 38 chr2 19072493 19072783 -231615071 + L1MC/D LINE L1 4411 4701 -1445 307 348 59 23 chr2 19072865 19073086 -231614768 + L1MC/D LINE L1 4824 5052 -1094 1243 245 22 34 chr2 19073378 19073786 -231614068 + L1MC/D LINE L1 5265 5642 -2166 227 101 29 58 chr2 19075202 19075271 -231612583 + (TA)n Simple_repeat Simple_repeat 1 67 0 2290 111 0 0 chr2 19075653 19075960 -231611894 + AluSg SINE Alu 1 307 -3 21 36 0 0 chr2 19076194 19076222 -231611632 + AT_rich Low_complexity Low_complexity 1 28 0 213 39 0 0 chr2 19076271 19076297 -231611557 + (TATAA)n Simple_repeat Simple_repeat 3 28 0 211 140 40 0 chr2 19076377 19076427 -231611427 + (ATATG)n Simple_repeat Simple_repeat 3 54 0 330 381 47 53 chr2 19076655 19076954 -231610900 + L1MEd LINE L1 274 570 -5549 43036 50 2 0 chr2 19076964 19083096 -231604758 + L1PA4 LINE L1 11 6154 -1 992 258 53 78 chr2 19083240 19083674 -231604180 + MLT2C2 LTR ERVL 1 423 -41 7277 134 54 17 chr2 19083675 19084880 -231602974 + HSMAR2 DNA Mariner 46 1295 -7 237 132 0 0 chr2 19084880 19084918 -231602936 + (CA)n Simple_repeat Simple_repeat 2 39 0 297 130 0 0 chr2 19084918 19084964 -231602890 + MLT2C2 LTR ERVL 465 510 -10 891 244 71 19 chr2 19085585 19086092 -231601762 + L1ME LINE L1 5003 5533 -631 1343 282 157 27 chr2 19086115 19086700 -231601154 + MLT2F LTR ERVL 1 661 -2 870 179 21 137 chr2 19086734 19086968 -231600886 + Zaphod DNA AcHobo 331 537 -3494 359 301 0 0 chr2 19087596 19087689 -231600165 + MIR3 SINE MIR 113 205 -3 407 301 92 12 chr2 19088691 19088864 -231598990 + MIR3 SINE MIR 15 201 -7 1830 231 90 27 chr2 19090848 19091337 -231596517 + MLT2B1 LTR ERVL 1 520 0 1354 167 40 117 chr2 19091822 19092217 -231595637 + MLT1A1 LTR MaLR 1 365 0 9055 206 10 26 chr2 19092217 19093976 -231593878 + MLT1A1-int LTR MaLR 1 1730 -5 275 77 0 26 chr2 19093982 19094021 -231593833 + MLT1A1 LTR MaLR 1 38 -327 212 128 0 43 chr2 19094022 19094069 -231593785 + (GGAGAA)n Simple_repeat Simple_repeat 6 50 0 589 283 120 77 chr2 19095050 19095400 -231592454 - L2 LINE L2 -10 3262 2898 656 241 54 49 chr2 19096343 19096719 -231591135 - LTR50 LTR ERVL 0 601 326 553 263 58 0 chr2 19096781 19096918 -231590936 - LTR50 LTR ERVL -650 145 1 387 297 35 43 chr2 19097065 19097263 -231590591 - MIR SINE MIR -44 218 19 295 257 99 20 chr2 19098667 19098768 -231589086 + MIR3 SINE MIR 93 201 -7 383 225 67 11 chr2 19099754 19099843 -231588011 - MER5A DNA MER1_type -92 97 4 416 321 48 30 chr2 19099854 19100019 -231587835 + MIR SINE MIR 18 185 -77 545 294 12 29 chr2 19101351 19101521 -231586333 + MER5A DNA MER1_type 2 168 -21 207 0 0 0 chr2 19103607 19103630 -231584224 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 225 94 0 0 chr2 19104437 19104469 -231583385 + (TG)n Simple_repeat Simple_repeat 2 33 0 229 200 0 75 chr2 19108324 19108404 -231579450 + G-rich Low_complexity Low_complexity 3 76 0 315 0 0 0 chr2 19112643 19112678 -231575176 + (TG)n Simple_repeat Simple_repeat 1 35 0 535 161 127 0 chr2 19114217 19114335 -231573519 + MER3 DNA MER1_type 77 209 0 203 158 0 26 chr2 19115234 19115272 -231572582 + C-rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 19115538 19115566 -231572288 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 19118736 19118758 -231569096 + (CCCCG)n Simple_repeat Simple_repeat 5 26 0 215 250 83 37 chr2 19119644 19119752 -231568102 + MIR SINE MIR 91 203 -59 1535 181 3 14 chr2 19120298 19120585 -231567269 - AluJb SINE Alu -28 284 1 3235 21 0 0 chr2 19121510 19121886 -231565968 + L1P LINE L1 4900 5275 -871 211 177 32 0 chr2 19121991 19122053 -231565801 + (TA)n Simple_repeat Simple_repeat 2 65 0 21 0 0 0 chr2 19122268 19122289 -231565565 + AT_rich Low_complexity Low_complexity 1 21 0 431 174 54 0 chr2 19122816 19122908 -231564946 - L1MDa LINE L1 -4865 1675 1579 461 289 134 16 chr2 19122996 19123384 -231564470 - L1MC4 LINE L1 -9 8033 7600 795 162 281 21 chr2 19123390 19123625 -231564229 - L1MD2 LINE L1 -3 6356 6061 6012 181 107 47 chr2 19123635 19124209 -231563645 - L1MDa LINE L1 -4244 2296 1758 2003 118 7 0 chr2 19124209 19124497 -231563357 - AluSq SINE Alu -23 290 1 6012 181 107 47 chr2 19124497 19125537 -231562317 - L1MDa LINE L1 -4782 1758 586 282 312 56 11 chr2 19126397 19126532 -231561322 + MIR SINE MIR 28 164 -63 410 294 40 22 chr2 19128106 19128315 -231559539 - MIR SINE MIR -4 258 2 652 306 89 28 chr2 19130432 19130651 -231557203 - L1ME4a LINE L1 0 6121 5917 1957 117 0 3 chr2 19130651 19130961 -231556893 + AluSx SINE Alu 1 309 0 652 306 89 28 chr2 19130961 19131057 -231556797 - L1ME4a LINE L1 -204 5917 5828 2015 207 83 43 chr2 19131057 19131657 -231556197 - MLT1E3 LTR MaLR 0 624 1 652 306 89 28 chr2 19131657 19131729 -231556125 - L1ME4a LINE L1 -293 5828 5706 262 234 108 18 chr2 19131732 19131843 -231556011 - L1P5 LINE L1 -702 5449 5329 469 241 125 0 chr2 19131921 19132033 -231555821 - FLAM_C SINE Alu -17 126 1 542 295 121 32 chr2 19132388 19132761 -231555093 - L1ME4a LINE L1 -1320 4826 4421 1309 238 65 12 chr2 19132786 19132882 -231554972 - L1MC4 LINE L1 -137 7905 7816 2243 123 0 7 chr2 19132882 19133192 -231554662 + AluSx SINE Alu 2 309 -3 1309 238 65 12 chr2 19133192 19133494 -231554360 - L1MC4 LINE L1 -226 7816 7486 721 286 43 18 chr2 19133547 19133802 -231554052 - MIR SINE MIR -1 261 2 201 263 26 40 chr2 19133888 19133964 -231553890 + MIR SINE MIR 59 133 -129 * 327 243 144 36 chr2 19133953 19134064 -231553790 - L2 LINE L2 0 3313 3191 297 304 74 0 chr2 19134068 19134203 -231553651 + MIR SINE MIR 117 261 -1 249 33 0 0 chr2 19135713 19135743 -231552111 + (TG)n Simple_repeat Simple_repeat 1 30 0 224 77 26 0 chr2 19135746 19135785 -231552069 + (TA)n Simple_repeat Simple_repeat 2 41 0 399 73 0 0 chr2 19136856 19136911 -231550943 + (TG)n Simple_repeat Simple_repeat 2 56 0 187 324 15 0 chr2 19137064 19137132 -231550722 + MIR SINE MIR 73 141 -121 22 80 0 0 chr2 19137132 19137182 -231550672 + AT_rich Low_complexity Low_complexity 1 50 0 256 277 92 59 chr2 19137182 19137301 -231550553 + MIR SINE MIR 140 262 0 281 254 17 0 chr2 19138280 19138339 -231549515 - L2 LINE L2 0 3272 3213 595 282 41 6 chr2 19138358 19138528 -231549326 + L2 LINE L2 2592 2767 -547 * 1039 301 82 10 chr2 19138522 19138904 -231548950 - L2 LINE L2 -724 2590 2178 543 56 37 19 chr2 19138904 19139011 -231548843 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 448 305 7 26 chr2 19139040 19139191 -231548663 - L2 LINE L2 -1405 1909 1762 236 252 61 69 chr2 19139448 19139579 -231548275 - MIR SINE MIR -1 261 132 23 0 0 0 chr2 19140656 19140679 -231547175 + AT_rich Low_complexity Low_complexity 1 23 0 236 300 29 0 chr2 19140988 19141058 -231546796 + CT-rich Low_complexity Low_complexity 1 72 0 35 0 0 0 chr2 19141058 19141093 -231546761 + AT_rich Low_complexity Low_complexity 1 35 0 333 0 0 0 chr2 19141298 19141335 -231546519 + (TG)n Simple_repeat Simple_repeat 2 38 0 548 210 94 0 chr2 19141408 19141546 -231546308 + MIR SINE MIR 47 197 -65 201 175 0 0 chr2 19142804 19142844 -231545010 + CT-rich Low_complexity Low_complexity 2 41 0 239 293 34 57 chr2 19142910 19143068 -231544786 - MIR SINE MIR -34 174 23 * 321 340 10 10 chr2 19143010 19143113 -231544741 + MIR SINE MIR 10 112 -150 2039 170 8 6 chr2 19143237 19143601 -231544253 + MLT1A1 LTR MaLR 1 365 0 308 259 132 26 chr2 19143601 19143905 -231543949 - L1ME LINE L1 -488 5674 5341 2237 101 3 3 chr2 19145421 19145729 -231542125 - AluY SINE Alu -3 308 1 207 0 0 0 chr2 19146343 19146366 -231541488 + (TTG)n Simple_repeat Simple_repeat 2 24 0 534 238 122 24 chr2 19146378 19146542 -231541312 - MER5A DNA MER1_type 0 189 10 36 40 0 0 chr2 19148266 19148316 -231539538 + AT_rich Low_complexity Low_complexity 1 50 0 482 301 85 42 chr2 19148394 19148972 -231538882 + L1MC/D LINE L1 4243 4845 -1301 671 327 99 22 chr2 19149026 19149530 -231538324 + L1MC/D LINE L1 4836 5378 -768 1730 199 14 9 chr2 19149530 19149951 -231537903 + L1PB3 LINE L1 4753 5175 -971 1698 160 0 4 chr2 19149955 19150218 -231537636 + AluSx SINE Alu 13 274 -38 4621 147 38 2 chr2 19150219 19151027 -231536827 + L1PB3 LINE L1 5317 6153 -1 354 312 127 35 chr2 19151161 19151476 -231536378 + L1MC/D LINE L1 5417 5760 -536 622 92 0 0 chr2 19152991 19153078 -231534776 - L1P LINE L1 -6049 97 11 518 288 30 0 chr2 19153642 19153774 -231534080 - MIR SINE MIR -70 192 57 1026 163 16 22 chr2 19154628 19154812 -231533042 - AluJb SINE Alu -8 304 122 40579 34 23 1 chr2 19155205 19161228 -231526626 - L1PA2 LINE L1 -2 6153 2 195 204 0 0 chr2 19161313 19161357 -231526497 + CT-rich Low_complexity Low_complexity 2 45 0 377 265 81 0 chr2 19162055 19162191 -231525663 + MIR SINE MIR 101 247 -15 1410 110 0 55 chr2 19162674 19162893 -231524961 + AluSq SINE Alu 1 207 -106 348 64 0 0 chr2 19162920 19162967 -231524887 + (TG)n Simple_repeat Simple_repeat 2 48 0 398 289 162 12 chr2 19163161 19163334 -231524520 - MIR SINE MIR -19 243 45 626 250 45 17 chr2 19163986 19164162 -231523692 - MIR SINE MIR -76 186 6 1236 223 63 17 chr2 19164350 19164700 -231523154 + MLT1A2 LTR MaLR 1 654 0 193 293 85 49 chr2 19164722 19164804 -231523050 + L2 LINE L2 3186 3270 -43 323 294 40 89 chr2 19165464 19165767 -231522087 - L3 LINE CR1 -45 1532 1245 271 246 72 0 chr2 19165827 19165896 -231521958 + MER91B DNA MER1_type 3 76 -114 231 324 183 23 chr2 19165974 19166193 -231521661 - L3 LINE CR1 -342 1235 982 290 373 63 0 chr2 19166353 19166511 -231521343 + L2 LINE L2 3099 3266 -6 2498 53 3 34 chr2 19170105 19170425 -231517429 - AluY SINE Alu -1 310 1 371 291 35 47 chr2 19170735 19170907 -231516947 + MIR SINE MIR 20 189 -73 2396 84 7 10 chr2 19170972 19171280 -231516574 - AluSp SINE Alu -6 307 1 186 43 0 0 chr2 19171394 19171417 -231516437 + (TG)n Simple_repeat Simple_repeat 2 24 0 221 292 72 26 chr2 19172118 19172279 -231515575 + MIR SINE MIR 20 188 -62 393 278 25 56 chr2 19172397 19172559 -231515295 - MIR3 SINE MIR -17 191 35 1950 268 96 18 chr2 19173174 19174419 -231513435 - L1MEc LINE L1 -1730 4485 3143 267 284 128 35 chr2 19174415 19174556 -231513298 - L1MEc LINE L1 -4719 1677 1524 * 685 353 19 6 chr2 19174567 19174927 -231512927 + HERVL LTR ERVL 3903 4267 -1387 482 279 60 60 chr2 19175144 19175413 -231512441 + LTR33 LTR ERVL 1 269 -252 276 291 47 0 chr2 19175495 19175581 -231512273 + LTR33 LTR ERVL 298 387 -134 373 238 0 49 chr2 19175775 19175897 -231511957 - MIR SINE MIR -28 234 119 783 256 74 9 chr2 19175998 19176228 -231511626 + MIR SINE MIR 7 251 -11 306 0 0 0 chr2 19177887 19177921 -231509933 + (TC)n Simple_repeat Simple_repeat 2 35 0 288 0 0 0 chr2 19177945 19177977 -231509877 + (GA)n Simple_repeat Simple_repeat 2 33 0 1865 127 13 37 chr2 19178024 19178324 -231509530 + AluSx SINE Alu 5 297 -15 180 311 123 0 chr2 19178372 19178478 -231509376 - L2 LINE L2 0 3313 3195 1399 147 43 0 chr2 19180223 19180463 -231507391 - L1MA9 LINE L1 -268 6044 5791 270 0 0 0 chr2 19180463 19180493 -231507361 + (TG)n Simple_repeat Simple_repeat 1 30 0 1399 147 43 0 chr2 19180493 19180510 -231507344 - L1MA9 LINE L1 -521 5791 5776 344 39 0 20 chr2 19180580 19180631 -231507223 + (TA)n Simple_repeat Simple_repeat 2 51 0 1447 171 33 0 chr2 19180644 19180918 -231506936 - L1MA9 LINE L1 -538 5774 5492 570 138 24 42 chr2 19180931 19181199 -231506655 + (TA)n Simple_repeat Simple_repeat 1 263 0 227 267 0 22 chr2 19181225 19181315 -231506539 + L1MC4 LINE L1 6616 6703 -1339 * 286 258 0 0 chr2 19181313 19181402 -231506452 - L1MC4 LINE L1 -1339 6703 6615 383 207 23 17 chr2 19181405 19181579 -231506275 + (TA)n Simple_repeat Simple_repeat 1 175 0 200 117 50 17 chr2 19181606 19181666 -231506188 + (TA)n Simple_repeat Simple_repeat 1 62 0 5066 177 26 5 chr2 19181701 19182901 -231504953 - L1MA9 LINE L1 -694 5474 4255 351 243 62 97 chr2 19184101 19184245 -231503609 + MIR SINE MIR 63 201 -61 25 51 0 0 chr2 19184257 19184296 -231503558 + AT_rich Low_complexity Low_complexity 1 39 0 402 194 0 0 chr2 19184325 19184392 -231503462 - AluJ/FRAM SINE Alu -27 285 219 344 175 0 0 chr2 19184481 19184538 -231503316 - AluS SINE Alu -243 57 1 363 161 0 0 chr2 19184730 19184792 -231503062 + MER3 DNA MER1_type 12 73 -136 222 37 0 0 chr2 19185957 19185984 -231501870 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 206 365 26 17 chr2 19186259 19186374 -231501480 + MIR SINE MIR 23 138 -124 234 167 0 0 chr2 19186536 19186572 -231501282 + MIR SINE MIR 219 254 -8 180 0 0 0 chr2 19188145 19188165 -231499689 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 310 288 140 54 chr2 19188486 19188708 -231499146 + L2 LINE L2 2824 3064 -208 200 246 35 0 chr2 19190060 19190117 -231497737 + GA-rich Low_complexity Low_complexity 2 60 0 219 261 116 93 chr2 19191341 19191609 -231496245 + L2 LINE L2 2999 3272 0 463 306 99 60 chr2 19191854 19192236 -231495618 - L2 LINE L2 -48 3224 2828 572 281 60 16 chr2 19192761 19193010 -231494844 + MIR SINE MIR 3 262 0 522 254 119 15 chr2 19193045 19193246 -231494608 - MIR SINE MIR 0 262 41 338 310 35 9 chr2 19193281 19193397 -231494457 - MIR3 SINE MIR -7 201 83 1843 111 22 15 chr2 19193431 19193701 -231494153 + AluSg SINE Alu 16 287 -23 295 318 36 24 chr2 19194266 19194433 -231493421 + MIR SINE MIR 30 200 -62 201 293 19 66 chr2 19194485 19194591 -231493263 + L2 LINE L2 2957 3057 -215 209 352 34 0 chr2 19195367 19195455 -231492399 - MIR SINE MIR -55 207 117 180 254 0 51 chr2 19195460 19195519 -231492335 - MIR3 SINE MIR -141 67 12 328 267 67 44 chr2 19195830 19195965 -231491889 - MIR3 SINE MIR -21 187 50 596 205 31 0 chr2 19196143 19196304 -231491550 - L1ME1 LINE L1 -292 5943 5778 * 3883 253 154 25 chr2 19196302 19198157 -231489697 - L1ME1 LINE L1 -4264 2132 40 23 68 0 0 chr2 19198983 19199027 -231488827 + AT_rich Low_complexity Low_complexity 1 44 0 531 194 102 0 chr2 19199662 19199760 -231488094 - FLAM_A SINE Alu -34 108 1 2404 145 44 0 chr2 19199832 19200240 -231487614 + MSTA LTR MaLR 3 428 0 1072 232 32 0 chr2 19200240 19200524 -231487330 - L1MEc LINE L1 -3368 3573 3281 403 288 33 41 chr2 19200551 19200822 -231487032 - L1MEc LINE L1 -5042 2080 1812 713 216 157 37 chr2 19200842 19201193 -231486661 - L1MEc LINE L1 -4888 1535 1143 470 197 66 53 chr2 19201192 19201344 -231486510 - L1MEc LINE L1 -6251 172 19 * 221 98 24 0 chr2 19201346 19201387 -231486467 + (CTATT)n Simple_repeat Simple_repeat 1 42 0 22 35 0 0 chr2 19201631 19201660 -231486194 + AT_rich Low_complexity Low_complexity 1 29 0 2613 107 28 26 chr2 19202212 19202634 -231485220 - MSTA LTR MaLR 0 428 6 186 43 0 0 chr2 19202634 19202657 -231485197 + (A)n Simple_repeat Simple_repeat 1 23 0 369 326 86 21 chr2 19203914 19204193 -231483661 + MARNA DNA Mariner 77 373 -213 342 181 96 0 chr2 19204724 19204807 -231483047 - MER97a DNA MER1_type? 0 894 804 1697 207 56 11 chr2 19204861 19205306 -231482548 - MER97a DNA MER1_type? -170 724 260 1059 188 95 67 chr2 19205304 19205650 -231482204 - MER97a DNA MER1_type? -535 359 4 * 590 314 120 20 chr2 19206198 19206555 -231481299 + HAL1 LINE L1 798 1190 -1317 189 296 19 0 chr2 19207444 19207498 -231480356 - MIR SINE MIR -69 139 85 202 220 0 51 chr2 19209081 19209140 -231478714 + CT-rich Low_complexity Low_complexity 1 56 0 199 288 70 48 chr2 19210060 19210289 -231477565 + L2 LINE L2 2032 2265 -1049 397 275 124 50 chr2 19210437 19210655 -231477199 + MIR SINE MIR 20 253 -9 1914 126 11 0 chr2 19211277 19211589 -231476265 + AluSx SINE Alu 1 315 0 399 340 7 7 chr2 19212771 19212918 -231474936 + MIR SINE MIR 3 149 -113 1766 109 9 103 chr2 19212978 19213298 -231474556 - AluY SINE Alu -21 290 1 2067 240 96 94 chr2 19213584 19215283 -231472571 + L1MDa LINE L1 52 1754 -4786 1394 158 35 8 chr2 19215310 19215558 -231472296 - MSTB1 LTR MaLR 0 432 178 4202 74 22 36 chr2 19215558 19216702 -231471152 - MER11A LTR ERVK 0 1266 1 1085 128 0 6 chr2 19216702 19216865 -231470989 - MSTB1 LTR MaLR -248 178 17 481 150 0 0 chr2 19216879 19216979 -231470875 + L1MDa LINE L1 2005 2104 -4436 1397 206 110 0 chr2 19217050 19217331 -231470523 + AluJb SINE Alu 1 312 0 238 175 0 32 chr2 19217423 19217486 -231470368 - L1MC4 LINE L1 -1339 6703 6643 * 290 200 33 0 chr2 19217453 19217543 -231470311 + L1MDa LINE L1 2323 2415 -4125 * 12896 158 76 11 chr2 19217533 19221891 -231465963 + L1PB1 LINE L1 453 5163 -1699 216 0 0 0 chr2 19221891 19221915 -231465939 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 12896 158 76 11 chr2 19221915 19222398 -231465456 + L1PB1 LINE L1 5163 5613 -1249 1955 109 138 9 chr2 19222399 19222423 -231465431 + L1PB1 LINE L1 6473 6493 -374 360 0 0 0 chr2 19222423 19222463 -231465391 + (CA)n Simple_repeat Simple_repeat 2 41 0 1955 109 138 9 chr2 19222463 19222787 -231465067 + L1PB1 LINE L1 6493 6866 -1 783 141 7 27 chr2 19222943 19223092 -231464762 + L1MA10 LINE L1 6186 6331 -3 1127 181 54 10 chr2 19223101 19223526 -231464328 + L1MDa LINE L1 2393 2835 -3705 923 168 20 35 chr2 19223651 19223848 -231464006 - L1MD3 LINE L1 -710 7285 7092 893 259 91 53 chr2 19223862 19224368 -231463486 - L1MD3 LINE L1 -1988 5820 5296 2556 121 77 22 chr2 19224716 19225199 -231462655 - L1MA8 LINE L1 0 6291 5779 195 42 0 0 chr2 19225199 19225223 -231462631 + (CA)n Simple_repeat Simple_repeat 2 25 0 2556 121 77 22 chr2 19225223 19225235 -231462619 - L1MA8 LINE L1 -512 5779 5769 878 293 9 19 chr2 19225235 19225552 -231462302 + HsTC2b DNA Tc2 34 347 -568 763 215 45 19 chr2 19225623 19225888 -231461966 + HsTC2b DNA Tc2 644 915 -3 361 274 40 8 chr2 19226202 19226326 -231461528 + L1M2b LINE L1 1588 1715 -5494 * 8002 210 36 26 chr2 19226316 19229736 -231458118 + L1M2 LINE L1 789 4244 -2604 335 280 4 17 chr2 19229773 19229894 -231457960 - MLT1I LTR MaLR -208 203 80 796 251 66 29 chr2 19230886 19231017 -231456837 + MER45C DNA AcHobo 14 139 -814 2150 167 82 18 chr2 19231017 19231455 -231456399 + MLT1C LTR MaLR 1 466 -1 796 251 66 29 chr2 19231455 19231566 -231456288 + MER45C DNA AcHobo 139 265 -688 709 223 154 0 chr2 19231636 19231824 -231456030 + MER45C DNA AcHobo 730 946 -7 194 271 140 47 chr2 19233545 19233652 -231454202 - L2 LINE L2 -5 3308 3192 923 298 188 17 chr2 19234219 19235217 -231452637 + L2 LINE L2 2140 3313 0 543 291 20 5 chr2 19235494 19235690 -231452164 - MIR SINE MIR 0 262 64 255 244 89 65 chr2 19235722 19235845 -231452009 + MLT1K LTR MaLR 378 503 -85 237 33 0 0 chr2 19237113 19237143 -231450711 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 734 86 0 0 chr2 19237553 19237658 -231450196 + AluSp/q SINE Alu 207 311 -2 23 0 0 0 chr2 19238976 19238999 -231448855 + AT_rich Low_complexity Low_complexity 1 23 0 333 341 29 59 chr2 19239083 19239356 -231448498 - L2 LINE L2 -2072 1242 978 292 240 115 44 chr2 19239456 19239639 -231448215 - L1ME4a LINE L1 -74 6047 5852 307 287 45 7 chr2 19239671 19239811 -231448043 - MIR SINE MIR -62 146 16 303 282 94 18 chr2 19240442 19240612 -231447242 - MIR SINE MIR -4 258 76 253 302 35 0 chr2 19240931 19241017 -231446837 - MIR3 SINE MIR -6 202 114 2165 128 0 0 chr2 19241218 19241508 -231446346 + AluSx SINE Alu 2 291 -21 195 42 0 0 chr2 19241511 19241535 -231446319 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 457 310 52 54 chr2 19242116 19242539 -231445315 - L2 LINE L2 -1905 1409 912 21 0 0 0 chr2 19243364 19243385 -231444469 + AT_rich Low_complexity Low_complexity 1 21 0 204 308 63 56 chr2 19243519 19243662 -231444192 - MIR SINE MIR -117 145 2 1931 203 57 5 chr2 19245105 19245543 -231442311 + L1MD3 LINE L1 7535 7995 0 403 278 66 54 chr2 19245783 19246042 -231441812 - MIR SINE MIR 0 262 1 198 286 29 14 chr2 19246072 19246142 -231441712 - L2 LINE L2 -24 3248 3178 270 264 9 57 chr2 19246166 19246272 -231441582 - MIR SINE MIR -66 196 96 515 56 99 0 chr2 19246958 19247029 -231440825 + MADE1 DNA Mariner 1 78 -2 192 77 0 0 chr2 19247168 19247194 -231440660 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 243 326 61 99 chr2 19247195 19247508 -231440346 - L2 LINE L2 -15 3257 2957 2302 104 0 0 chr2 19248642 19248940 -231438914 - AluY SINE Alu -13 298 1 230 196 28 75 chr2 19250663 19250770 -231437084 + GA-rich Low_complexity Low_complexity 2 103 0 448 256 100 18 chr2 19251685 19251844 -231436010 + MER5B DNA MER1_type 15 175 -3 221 290 178 0 chr2 19252425 19252532 -231435322 + MIR3 SINE MIR 81 206 -2 219 276 38 29 chr2 19252658 19252763 -231435091 - MIR SINE MIR -109 153 48 235 340 55 63 chr2 19254791 19255029 -231432825 - L2 LINE L2 -3 3269 3034 1470 215 90 54 chr2 19255059 19255505 -231432349 + MLT1C LTR MaLR 6 467 0 274 227 68 34 chr2 19255797 19255885 -231431969 + MLT1K LTR MaLR 142 232 -356 635 161 108 0 chr2 19256372 19256511 -231431343 - MSTC LTR MaLR -244 152 1 6379 235 67 44 chr2 19256511 19256855 -231430999 - MSTD-int LTR MaLR 0 1735 1401 1831 96 69 38 chr2 19256855 19257146 -231430708 - AluSx SINE Alu -8 304 5 6379 235 67 44 chr2 19257146 19258495 -231429359 - MSTD-int LTR MaLR -334 1401 2 1622 192 70 44 chr2 19258497 19258883 -231428971 - MSTD LTR MaLR 0 396 1 333 277 0 64 chr2 19259324 19259465 -231428389 + MIR SINE MIR 86 217 -45 2334 168 33 12 chr2 19260659 19261082 -231426772 + MSTB1 LTR MaLR 1 432 0 415 287 7 21 chr2 19261199 19261342 -231426512 - MIR SINE MIR -54 208 68 2319 105 0 0 chr2 19262236 19262531 -231425323 + AluSp SINE Alu 1 295 -18 225 390 50 7 chr2 19262713 19262854 -231425000 - L3b LINE CR1 -87 1496 1350 39 0 0 0 chr2 19262964 19263003 -231424851 + AT_rich Low_complexity Low_complexity 1 39 0 2170 143 0 83 chr2 19263015 19263413 -231424441 - MLT1A1 LTR MaLR 0 365 1 254 262 82 83 chr2 19263804 19263966 -231423888 - L1ME LINE L1 -426 5744 5583 2332 98 10 0 chr2 19263966 19264271 -231423583 - AluSq SINE Alu -5 308 1 254 262 82 83 chr2 19264271 19264432 -231423422 - L1ME LINE L1 -587 5583 5349 472 298 53 21 chr2 19264462 19264744 -231423110 - L1ME LINE L1 -805 5341 5051 183 297 47 16 chr2 19264900 19264964 -231422890 + MIR SINE MIR 111 176 -86 213 292 15 0 chr2 19266827 19266892 -231420962 + MIR SINE MIR 2 67 -195 2307 120 0 0 chr2 19266998 19267307 -231420547 + AluSx SINE Alu 1 309 -3 24 0 0 0 chr2 19268551 19268575 -231419279 + AT_rich Low_complexity Low_complexity 1 24 0 1394 197 15 4 chr2 19268682 19268951 -231418903 + L1MC1 LINE L1 6061 6332 -1 285 167 0 0 chr2 19269257 19269311 -231418543 + T-rich Low_complexity Low_complexity 1 54 0 952 295 77 19 chr2 19271912 19272224 -231415630 - MER115 DNA AcHobo -329 364 35 316 304 29 0 chr2 19272291 19272393 -231415461 + MIR SINE MIR 35 139 -123 1104 161 32 37 chr2 19273593 19273811 -231414043 - MER20 DNA MER1_type -2 217 1 393 317 34 47 chr2 19274006 19274224 -231413630 - MIR SINE MIR -31 231 11 293 0 0 26 chr2 19275396 19275434 -231412420 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 578 247 47 12 chr2 19276075 19276245 -231411609 + MIR3 SINE MIR 33 208 0 426 85 0 0 chr2 19277034 19277093 -231410761 + (TTA)n Simple_repeat Simple_repeat 2 60 0 261 0 0 0 chr2 19277793 19277822 -231410032 + (TC)n Simple_repeat Simple_repeat 1 29 0 200 360 73 0 chr2 19279890 19280026 -231407828 + L2 LINE L2 2609 2754 -560 237 316 20 46 chr2 19280127 19280279 -231407575 + L2 LINE L2 2895 3042 -230 * 1463 280 245 55 chr2 19280265 19281939 -231405915 + L2 LINE L2 316 2433 -881 288 0 0 0 chr2 19281939 19281971 -231405883 + (CA)n Simple_repeat Simple_repeat 1 32 0 1463 280 245 55 chr2 19281971 19282294 -231405560 + L2 LINE L2 2433 2693 -621 188 0 74 0 chr2 19282294 19282321 -231405533 + (TATATG)n Simple_repeat Simple_repeat 3 31 0 3106 123 10 26 chr2 19282331 19282826 -231405028 - L1MC1 LINE L1 -420 5913 5427 528 302 28 74 chr2 19282827 19283215 -231404639 + L2 LINE L2 2688 3055 -258 559 205 80 113 chr2 19283958 19284197 -231403657 - MER112 DNA MER1_type -13 247 17 299 341 96 15 chr2 19284418 19284553 -231403301 + MIR3 SINE MIR 31 176 -32 1765 181 13 7 chr2 19284812 19285122 -231402732 - AluJb SINE Alu 0 312 1 2293 114 0 19 chr2 19285327 19285644 -231402210 - AluY SINE Alu 0 311 1 533 315 94 16 chr2 19287075 19287329 -231400525 - L3 LINE CR1 -175 1402 1129 1996 188 48 0 chr2 19288972 19289344 -231398510 + MLT1B LTR MaLR 1 390 0 481 312 39 24 chr2 19289504 19289709 -231398145 - MIR SINE MIR -34 228 21 197 254 79 16 chr2 19290055 19290118 -231397736 + MIR3 SINE MIR 135 201 -7 789 171 11 11 chr2 19290543 19290719 -231397135 + G-rich Low_complexity Low_complexity 4 179 0 587 199 13 32 chr2 19290737 19290991 -231396863 + G-rich Low_complexity Low_complexity 1 249 0 312 158 0 0 chr2 19290991 19291048 -231396806 + GA-rich Low_complexity Low_complexity 1 57 0 340 292 168 0 chr2 19291420 19291533 -231396321 + L2 LINE L2 3182 3313 0 2196 139 0 0 chr2 19291991 19292294 -231395560 + AluSx SINE Alu 7 309 -3 577 158 0 0 chr2 19292620 19292715 -231395139 - L1MC3 LINE L1 -492 7293 7199 292 272 43 0 chr2 19292715 19292807 -231395047 - MLT1F1 LTR MaLR -437 130 35 423 136 37 0 chr2 19292807 19292888 -231394966 - L1MC3 LINE L1 -688 7097 7014 2823 179 48 16 chr2 19292892 19293473 -231394381 - L1MC3 LINE L1 -820 6965 6366 1137 272 46 12 chr2 19293476 19293799 -231394055 - MER45C DNA AcHobo -140 813 480 896 204 47 5 chr2 19293796 19293987 -231393867 - MER45C DNA AcHobo -754 199 1 * 359 220 21 99 chr2 19294515 19294681 -231393173 + MIR SINE MIR 97 255 -7 181 307 0 40 chr2 19295588 19295663 -231392191 - L2 LINE L2 -20 3252 3181 645 292 0 0 chr2 19295729 19295897 -231391957 - MIR SINE MIR -14 248 81 857 253 101 34 chr2 19295897 19296285 -231391569 - LTR16B LTR ERVL 0 464 51 227 222 12 123 chr2 19296348 19296429 -231391425 - MIR SINE MIR -187 75 4 388 365 47 28 chr2 19296618 19296832 -231391022 - L2 LINE L2 -89 3183 2966 242 214 0 18 chr2 19296904 19296960 -231390894 - L2 LINE L2 -339 2974 2920 23 0 0 0 chr2 19297682 19297705 -231390149 + AT_rich Low_complexity Low_complexity 1 23 0 266 160 60 0 chr2 19297783 19297833 -231390021 - MLT1G1 LTR MaLR -182 413 361 917 252 20 31 chr2 19297876 19298130 -231389724 - MLT1G1 LTR MaLR -342 253 3 461 275 182 22 chr2 19298811 19299080 -231388774 + MLT1K LTR MaLR 277 588 0 1043 266 68 64 chr2 19300458 19300925 -231386929 - L2 LINE L2 -4 3309 2841 186 298 0 0 chr2 19301904 19301951 -231385903 + MIR SINE MIR 98 144 -64 537 272 90 23 chr2 19302786 19303111 -231384743 + MLT1I LTR MaLR 4 406 -3 423 315 23 15 chr2 19304024 19304154 -231383700 + MIR3 SINE MIR 78 208 0 219 146 0 0 chr2 19304255 19304296 -231383558 + (CA)n Simple_repeat Simple_repeat 2 42 0 186 43 0 0 chr2 19304795 19304818 -231383036 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 * 198 0 0 0 chr2 19304817 19304839 -231383015 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 333 0 0 0 chr2 19304838 19304875 -231382979 + (CA)n Simple_repeat Simple_repeat 1 37 0 329 327 50 0 chr2 19305682 19305783 -231382071 + MIR SINE MIR 40 145 -63 2411 134 0 30 chr2 19306473 19306875 -231380979 + MLT1B LTR MaLR 1 390 0 398 292 46 0 chr2 19306913 19307043 -231380811 - MIR3 SINE MIR -8 200 65 1838 149 27 7 chr2 19307880 19308175 -231379679 - AluSx SINE Alu -11 301 1 912 355 112 23 chr2 19309974 19310726 -231377128 + L1M4 LINE L1 3705 4523 -1623 180 276 0 69 chr2 19310825 19310883 -231376971 + L3 LINE CR1 1413 1466 -111 21 36 0 0 chr2 19311282 19311310 -231376544 + AT_rich Low_complexity Low_complexity 1 28 0 547 221 0 47 chr2 19311525 19311652 -231376202 + L2 LINE L2 3193 3313 0 310 293 162 39 chr2 19311659 19311918 -231375936 - L1M4 LINE L1 -786 5360 5070 425 331 15 15 chr2 19312809 19312939 -231374915 - MIR SINE MIR -121 141 12 474 248 19 0 chr2 19312941 19313046 -231374808 - MER81 DNA DNA 0 114 8 1234 174 70 52 chr2 19313047 19313402 -231374452 - MSTA LTR MaLR -2 426 3 201 94 0 0 chr2 19313474 19313506 -231374348 + (TC)n Simple_repeat Simple_repeat 2 33 0 465 295 31 81 chr2 19314754 19315012 -231372842 - MIR SINE MIR 0 262 18 240 35 0 0 chr2 19316435 19316464 -231371390 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2156 146 3 0 chr2 19317124 19317433 -231370421 - AluJb SINE Alu -2 310 1 1545 216 60 6 chr2 19317615 19317966 -231369888 + MLT1C LTR MaLR 95 464 -3 755 232 179 25 chr2 19317993 19318273 -231369581 + L2 LINE L2 2031 2353 -961 253 263 66 0 chr2 19318417 19318493 -231369361 - L2 LINE L2 -39 3233 3153 1305 263 24 29 chr2 19321258 19321537 -231366317 + L2 LINE L2 2164 2442 -872 1888 138 29 109 chr2 19321537 19321985 -231365869 + MLT2D LTR ERVL 1 412 -2 1305 263 24 29 chr2 19321985 19322124 -231365730 + L2 LINE L2 2442 2580 -734 1178 140 0 22 chr2 19322131 19322310 -231365544 + AluJb SINE Alu 136 310 -2 328 330 92 16 chr2 19322323 19322508 -231365346 + L2 LINE L2 3085 3283 -30 1624 219 23 6 chr2 19322510 19322862 -231364992 - MLT1A1 LTR MaLR -7 358 1 607 208 158 35 chr2 19323950 19324152 -231363702 - MIR SINE MIR -5 257 31 335 297 185 49 chr2 19324242 19324632 -231363222 + L2 LINE L2 2871 3313 0 346 280 8 8 chr2 19324844 19324962 -231362892 + Charlie5 DNA MER1_type 7 124 -2488 2077 113 25 6 chr2 19324973 19325335 -231362519 + Charlie5 DNA MER1_type 2245 2613 0 2383 131 44 109 chr2 19325777 19326280 -231361574 + MER101 LTR ERV1 4 473 -1 24 0 0 0 chr2 19326621 19326645 -231361209 + AT_rich Low_complexity Low_complexity 1 24 0 1980 192 21 45 chr2 19327253 19327722 -231360132 + MLT1D LTR MaLR 1 458 -47 444 232 92 14 chr2 19328120 19328262 -231359592 - MIR3 SINE MIR -31 177 25 275 235 0 15 chr2 19329663 19329731 -231358123 - MIR SINE MIR -16 246 180 718 214 15 82 chr2 19329751 19329947 -231357907 - MER5A DNA MER1_type -6 183 1 434 298 71 40 chr2 19329970 19330195 -231357659 - MIR SINE MIR -26 236 5 1031 235 70 9 chr2 19330819 19331049 -231356805 - MIR SINE MIR -17 245 2 246 200 29 0 chr2 19331113 19331183 -231356671 + (TAG)n Simple_repeat Simple_repeat 2 73 0 373 339 6 0 chr2 19331212 19331389 -231356465 + (TAG)n Simple_repeat Simple_repeat 2 179 0 222 225 0 0 chr2 19331423 19331503 -231356351 + (TAG)n Simple_repeat Simple_repeat 3 82 0 725 341 28 4 chr2 19331608 19331857 -231355997 + MIR SINE MIR 1 255 -7 538 290 56 28 chr2 19332835 19333049 -231354805 - MIR SINE MIR -6 256 37 288 346 74 52 chr2 19333335 19333566 -231354288 - L2 LINE L2 -470 2844 2609 741 117 0 0 chr2 19335415 19335552 -231352302 + (GGAA)n Simple_repeat Simple_repeat 3 139 0 1817 100 76 17 chr2 19337611 19337900 -231349954 - AluSx SINE Alu -6 306 1 180 345 0 17 chr2 19338018 19338076 -231349778 - MIR SINE MIR -6 256 200 459 326 22 11 chr2 19340246 19340424 -231347430 + MIR3 SINE MIR 22 201 -7 226 250 50 0 chr2 19340598 19340678 -231347176 + L1MC4 LINE L1 6617 6700 -1342 276 30 0 0 chr2 19340683 19340716 -231347138 + (TG)n Simple_repeat Simple_repeat 1 33 0 183 323 0 0 chr2 19340811 19340873 -231346981 + L2 LINE L2 2996 3057 -215 498 259 63 11 chr2 19341129 19341318 -231346536 + L1ME2 LINE L1 4943 5141 -1005 1097 142 18 60 chr2 19341319 19341537 -231346317 + AluJb SINE Alu 86 294 -18 3060 236 41 22 chr2 19341549 19342519 -231345335 + L1ME2 LINE L1 5162 6156 -8 240 329 25 0 chr2 19342549 19342628 -231345226 - L2 LINE L2 -4 3309 3229 378 0 0 0 chr2 19342706 19342748 -231345106 + (CA)n Simple_repeat Simple_repeat 1 42 0 541 303 91 0 chr2 19343624 19343822 -231344032 + MIR SINE MIR 46 261 -1 282 382 40 10 chr2 19344010 19344209 -231343645 - MIR SINE MIR -39 223 19 410 351 50 45 chr2 19344886 19345328 -231342526 - L2 LINE L2 0 3272 2829 1085 194 41 0 chr2 19345432 19345628 -231342226 - MER3 DNA MER1_type -5 204 1 315 0 0 0 chr2 19346908 19346943 -231340911 + (TG)n Simple_repeat Simple_repeat 2 36 0 207 0 0 0 chr2 19347823 19347846 -231340008 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 249 325 26 0 chr2 19349401 19349478 -231338376 - MIR SINE MIR -16 246 168 627 194 58 52 chr2 19349592 19349783 -231338071 - MER112 DNA MER1_type -3 257 66 673 302 60 65 chr2 19351451 19351802 -231336052 - L2 LINE L2 -2 3270 2922 576 367 84 19 chr2 19354202 19354888 -231332966 - L2 LINE L2 -176 3096 2363 429 204 0 11 chr2 19356557 19356645 -231331209 + MLT1C LTR MaLR 381 467 0 396 298 35 0 chr2 19358674 19358788 -231329066 - MIR SINE MIR -35 227 110 399 314 15 31 chr2 19358859 19358990 -231328864 - MIR3 SINE MIR -6 202 73 2082 124 3 0 chr2 19359877 19360183 -231327671 + AluSc SINE Alu 1 307 -2 208 271 21 0 chr2 19360325 19360373 -231327481 + L2 LINE L2 3250 3298 -15 1286 243 93 33 chr2 19360390 19360789 -231327065 + MLT1J2 LTR MaLR 3 425 -25 1983 117 43 0 chr2 19361976 19362275 -231325579 + AluSx SINE Alu 1 312 0 184 206 29 200 chr2 19362326 19362496 -231325358 + MIR SINE MIR 56 196 -66 192 135 0 0 chr2 19362772 19362809 -231325045 + (TG)n Simple_repeat Simple_repeat 1 37 0 192 333 18 105 chr2 19362900 19363014 -231324840 - L2 LINE L2 -182 3090 2987 227 39 0 0 chr2 19365799 19365825 -231322029 + AluY SINE Alu 11 36 -264 633 141 0 0 chr2 19365825 19365917 -231321937 + AluSg/x SINE Alu 206 297 -13 308 272 154 6 chr2 19365918 19366080 -231321774 + L1M4 LINE L1 2435 2620 -3526 1018 169 4 37 chr2 19366276 19366519 -231321335 + L1M4 LINE L1 2645 2879 -3267 1510 204 64 52 chr2 19366528 19366968 -231320886 - L1MA9 LINE L1 -37 6275 5831 * 1676 232 99 3 chr2 19366964 19367538 -231320316 + L1M4 LINE L1 2840 3468 -2678 2389 202 32 4 chr2 19367550 19368011 -231319843 + L1MB5 LINE L1 3 476 -6373 426 103 0 0 chr2 19368072 19368130 -231319724 - Alu SINE Alu -259 59 2 7371 206 30 15 chr2 19368215 19370696 -231317158 + L1MB5 LINE L1 4177 6694 -182 465 19 0 0 chr2 19370731 19370785 -231317069 + (TG)n Simple_repeat Simple_repeat 2 55 0 201 121 0 0 chr2 19370799 19370832 -231317022 + (TA)n Simple_repeat Simple_repeat 1 33 0 1971 149 30 41 chr2 19370838 19370983 -231316871 - MLT2D LTR ERVL -50 364 219 1821 157 24 42 chr2 19370983 19371365 -231316489 - THE1C LTR MaLR 0 375 1 1971 149 30 41 chr2 19371365 19371587 -231316267 - MLT2D LTR ERVL -195 219 1 569 240 47 47 chr2 19371587 19371617 -231316237 + L1MB5 LINE L1 6698 6727 -149 2502 175 33 4 chr2 19371617 19372069 -231315785 - MLT1C LTR MaLR -2 465 1 569 240 47 47 chr2 19372069 19372209 -231315645 + L1MB5 LINE L1 6726 6868 -8 1770 154 14 0 chr2 19372762 19373055 -231314799 + AluSx SINE Alu 3 299 -13 190 397 0 0 chr2 19373291 19373369 -231314485 - MER5C DNA MER1_type -245 79 2 1239 238 134 2 chr2 19373535 19373938 -231313916 + L1ME3A LINE L1 5710 6165 -5 437 195 73 0 chr2 19374619 19374701 -231313153 + MER91C DNA MER1_type 1 88 -52 420 20 0 0 chr2 19374717 19374766 -231313088 + (TC)n Simple_repeat Simple_repeat 1 49 0 183 235 47 47 chr2 19376514 19376525 -231311329 + MER5A DNA MER1_type 6 16 -173 282 250 79 85 chr2 19376525 19376666 -231311188 - MER5B DNA MER1_type -2 187 16 202 243 100 43 chr2 19377431 19377501 -231310353 + L2 LINE L2 3168 3241 -31 1255 298 100 49 chr2 19379548 19380555 -231307299 - L2 LINE L2 0 3272 2213 293 297 123 14 chr2 19380685 19380946 -231306908 + L2 LINE L2 2720 3002 -270 337 299 41 14 chr2 19381723 19381870 -231305984 + L2 LINE L2 2825 2975 -338 2433 92 14 20 chr2 19382384 19382741 -231305113 + THE1A LTR MaLR 1 355 0 9271 96 34 1 chr2 19382741 19383986 -231303868 + THE1A-int LTR MaLR 1 1286 -294 354 81 46 23 chr2 19384342 19384429 -231303425 + (CA)n Simple_repeat Simple_repeat 2 90 0 827 62 9 26 chr2 19384455 19384568 -231303286 + THE1B LTR MaLR 1 111 -253 394 135 49 34 chr2 19384569 19384897 -231302957 + (CA)n Simple_repeat Simple_repeat 1 333 0 436 240 40 16 chr2 19385307 19385432 -231302422 + MIR SINE MIR 19 146 -62 333 0 0 0 chr2 19385785 19385822 -231302032 + (CA)n Simple_repeat Simple_repeat 2 38 0 390 337 57 73 chr2 19386726 19387026 -231300828 - L2 LINE L2 -20 3252 2958 2010 143 3 26 chr2 19388673 19388980 -231298874 + AluJo SINE Alu 2 301 -11 510 250 18 0 chr2 19390728 19390840 -231297014 - MER81 DNA DNA 0 114 1 2052 108 6 71 chr2 19391356 19391681 -231296173 - AluY SINE Alu -5 306 3 1979 210 40 62 chr2 19391880 19392460 -231295394 - L1MD3 LINE L1 -1 7994 7428 1356 195 4 12 chr2 19392743 19392984 -231294870 - MER8 DNA MER2_type 0 239 1 1924 116 58 69 chr2 19393019 19393398 -231294456 - THE1C LTR MaLR 0 375 1 489 333 18 12 chr2 19393912 19394083 -231293771 - MIR3 SINE MIR -21 187 16 2282 105 0 0 chr2 19395234 19395530 -231292324 + AluSg SINE Alu 1 296 -14 279 292 159 18 chr2 19397281 19397394 -231290460 + L2 LINE L2 3181 3309 -4 417 356 37 6 chr2 19398071 19398234 -231289620 + MIR SINE MIR 9 176 -86 193 336 18 45 chr2 19398405 19398515 -231289339 + L2 LINE L2 3008 3114 -158 495 286 148 5 chr2 19400096 19400306 -231287548 - MIR SINE MIR -14 248 9 264 239 109 11 chr2 19401118 19401210 -231286644 + MIR SINE MIR 35 135 -127 401 253 121 31 chr2 19401215 19401453 -231286401 - MIR SINE MIR 0 262 2 528 286 100 29 chr2 19402405 19402615 -231285239 - MIR SINE MIR -29 233 9 485 279 126 0 chr2 19403080 19403263 -231284591 + LTR33 LTR ERVL 3 208 -313 309 209 116 47 chr2 19403343 19403472 -231284382 + LTR33 LTR ERVL 384 521 0 241 264 11 58 chr2 19404036 19404123 -231283731 - MIR SINE MIR -94 114 32 1645 192 0 31 chr2 19404236 19404554 -231283300 + AluJo SINE Alu 1 308 -4 307 341 66 43 chr2 19405373 19405631 -231282223 - L3 LINE CR1 -9 1568 1305 716 263 158 15 chr2 19405702 19406044 -231281810 - L2 LINE L2 0 3313 2923 2297 122 0 3 chr2 19406187 19406491 -231281363 - AluSx SINE Alu -9 303 1 183 237 0 0 chr2 19407063 19407101 -231280753 + L3 LINE CR1 865 902 -675 468 310 141 17 chr2 19408191 19408481 -231279373 - L2 LINE L2 -77 3195 2870 226 228 18 0 chr2 19408876 19408933 -231278921 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 203 136 45 0 chr2 19408937 19408981 -231278873 + GA-rich Low_complexity Low_complexity 3 48 0 286 366 21 21 chr2 19409954 19410096 -231277758 + MIR3 SINE MIR 2 143 -65 219 69 0 0 chr2 19410688 19410717 -231277137 + (A)n Simple_repeat Simple_repeat 1 29 0 288 333 33 17 chr2 19411713 19411833 -231276021 + L3 LINE CR1 1271 1392 -185 252 196 0 0 chr2 19412479 19412525 -231275329 - MIR SINE MIR -115 147 102 280 278 60 76 chr2 19413432 19413605 -231274249 - MIR SINE MIR -68 140 22 23 0 0 0 chr2 19413756 19413779 -231274075 + AT_rich Low_complexity Low_complexity 1 23 0 268 241 211 15 chr2 19414262 19414395 -231273459 + MIR SINE MIR 100 258 -4 187 330 134 0 chr2 19414977 19415074 -231272780 - L2 LINE L2 -18 3254 3145 315 347 97 19 chr2 19416455 19416671 -231271183 + L2 LINE L2 3000 3232 -40 435 38 0 0 chr2 19416688 19416741 -231271113 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 372 22 0 0 chr2 19417529 19417574 -231270280 + (TC)n Simple_repeat Simple_repeat 1 45 0 413 302 11 2 chr2 19418149 19418260 -231269594 + MIR SINE MIR 5 116 -92 252 0 0 0 chr2 19418303 19418331 -231269523 + (TG)n Simple_repeat Simple_repeat 2 29 0 1172 297 53 10 chr2 19418333 19418919 -231268935 - L1MC4a LINE L1 -1899 5909 5299 946 306 40 55 chr2 19419303 19419908 -231267946 - ERVL LTR ERVL -4091 1673 1078 266 214 0 0 chr2 19420753 19420809 -231267045 - LTR33A LTR ERVL 0 523 468 1904 162 58 56 chr2 19421555 19421968 -231265886 - MLT2D LTR ERVL 0 414 1 203 281 101 76 chr2 19421970 19422208 -231265646 + L2 LINE L2 3029 3272 0 2577 60 0 13 chr2 19422326 19422640 -231265214 - AluY SINE Alu -1 310 1 189 234 0 78 chr2 19423535 19423599 -231264255 + MIR SINE MIR 66 124 -138 405 136 0 0 chr2 19424888 19424954 -231262900 + (TTTA)n Simple_repeat Simple_repeat 1 66 0 21 57 0 0 chr2 19425480 19425515 -231262339 + AT_rich Low_complexity Low_complexity 1 35 0 1504 169 43 66 chr2 19425524 19425825 -231262029 + AluSq SINE Alu 1 294 -19 728 260 80 72 chr2 19425848 19426225 -231261629 - MLT1I LTR MaLR -2 407 28 309 210 0 0 chr2 19426262 19426324 -231261530 + MER94 DNA DNA 8 69 -65 2398 92 0 3 chr2 19426436 19426742 -231261112 + AluSx SINE Alu 1 305 -7 1001 139 29 0 chr2 19426797 19426970 -231260884 + L1PA16 LINE L1 5958 6135 -31 318 353 8 8 chr2 19427265 19427384 -231260470 + MIR3 SINE MIR 13 131 -77 348 133 0 0 chr2 19428121 19428181 -231259673 + (CA)n Simple_repeat Simple_repeat 1 60 0 192 188 188 25 chr2 19428921 19429001 -231258853 - MIR SINE MIR -68 140 48 199 260 156 0 chr2 19429113 19429209 -231258645 + MIR SINE MIR 145 255 -7 3481 49 2 2 chr2 19429294 19429725 -231258129 + L1PA5 LINE L1 5724 6154 0 824 175 28 7 chr2 19430930 19431073 -231256781 + FRAM SINE Alu 1 146 -30 199 192 19 39 chr2 19431091 19431143 -231256711 - L3 LINE CR1 -15 1562 1512 188 181 111 83 chr2 19431221 19431293 -231256561 - L3 LINE CR1 -185 1392 1319 434 237 0 0 chr2 19433374 19433467 -231254387 - MER45A DNA AcHobo 0 178 86 263 329 102 29 chr2 19434131 19434268 -231253586 + MIR3 SINE MIR 55 201 -7 575 224 158 0 chr2 19434900 19435052 -231252802 + MER5A DNA MER1_type 14 189 0 778 230 63 0 chr2 19435062 19435236 -231252618 + MER5A DNA MER1_type 4 188 -1 313 326 244 0 chr2 19436001 19436136 -231251718 - MIR3 SINE MIR -9 199 32 205 347 27 53 chr2 19440498 19440648 -231247206 - MIR3 SINE MIR -62 146 1 1973 113 69 36 chr2 19441213 19441576 -231246278 - THE1C LTR MaLR 0 375 1 2435 126 28 14 chr2 19442947 19443305 -231244549 + THE1B LTR MaLR 1 363 -1 1744 168 7 0 chr2 19445562 19445842 -231242012 - AluJo SINE Alu -20 292 11 2301 109 7 0 chr2 19445861 19446164 -231241690 - AluSq SINE Alu -8 305 1 865 191 42 0 chr2 19446173 19446341 -231241513 - AluSg/x SINE Alu -17 295 121 750 107 10 0 chr2 19446496 19446599 -231241255 - AluSq/x SINE Alu -209 104 1 200 241 37 19 chr2 19446775 19446829 -231241025 + MIR SINE MIR 35 89 -119 3567 91 91 0 chr2 19447916 19448489 -231239365 + LTR24C LTR ERV1 10 634 -1 2438 102 0 0 chr2 19449725 19450030 -231237824 - AluSx SINE Alu -7 305 1 2931 112 90 56 chr2 19452327 19452815 -231235039 - L1MA6 LINE L1 0 6300 5785 261 0 0 0 chr2 19452815 19452844 -231235010 + (TG)n Simple_repeat Simple_repeat 2 30 0 2931 112 90 56 chr2 19452844 19452979 -231234875 - L1MA6 LINE L1 -515 5785 5656 354 278 102 29 chr2 19455419 19455624 -231232230 - L1ME LINE L1 -353 5768 5549 1122 217 86 50 chr2 19456056 19456475 -231231379 + MLT1C LTR MaLR 34 467 0 214 308 168 37 chr2 19456476 19456583 -231231271 - MIR SINE MIR -61 147 27 301 294 87 11 chr2 19456695 19456787 -231231067 + MIR SINE MIR 24 122 -86 2204 121 0 0 chr2 19457089 19457386 -231230468 - AluSx SINE Alu -15 297 1 401 220 30 0 chr2 19457463 19457563 -231230291 + Charlie5 DNA MER1_type 7 109 -2503 1861 147 0 34 chr2 19457571 19457887 -231229967 + AluJb SINE Alu 1 306 0 1156 134 71 45 chr2 19457974 19458242 -231229612 + Charlie5 DNA MER1_type 2270 2544 -68 249 224 0 30 chr2 19458243 19458310 -231229544 + MIR SINE MIR 71 135 -73 200 333 37 0 chr2 19459204 19459285 -231228569 - MIR SINE MIR -161 101 18 2157 103 0 4 chr2 19459303 19459634 -231228220 + AluSx SINE Alu 5 334 0 1819 132 186 14 chr2 19460368 19460733 -231227121 + MSTA LTR MaLR 1 428 0 204 327 53 9 chr2 19461007 19461120 -231226734 - MIR3 SINE MIR -25 183 66 701 172 5 115 chr2 19461179 19461371 -231226483 + MLT1C LTR MaLR 23 193 -274 266 242 0 0 chr2 19461394 19461456 -231226398 + MLT1C LTR MaLR 329 390 0 251 281 44 9 chr2 19462766 19462880 -231224974 - L2 LINE L2 -212 3060 2943 204 257 0 0 chr2 19464025 19464095 -231223759 + (TG)n Simple_repeat Simple_repeat 1 70 0 458 297 61 40 chr2 19467564 19467809 -231220045 + L1ME LINE L1 5265 5509 -612 1647 254 79 10 chr2 19467965 19468571 -231219283 + MER114 LTR ERV 1 648 0 10512 112 25 3 chr2 19469088 19470526 -231217328 - Tigger1 DNA MER2_type 0 2418 941 2758 135 48 25 chr2 19470526 19471001 -231216853 + MER66B LTR ERV1 1 486 0 10512 112 25 3 chr2 19471001 19471150 -231216704 - Tigger1 DNA MER2_type -1477 941 797 784 286 36 18 chr2 19471236 19471624 -231216230 + L1MEc LINE L1 1987 2381 -4015 5737 249 72 15 chr2 19472342 19474403 -231213451 + L1MEc LINE L1 2322 4500 -1715 1117 281 130 52 chr2 19474533 19474771 -231213083 - L2 LINE L2 -4 3309 3091 1853 154 0 24 chr2 19474771 19475063 -231212791 - AluJo SINE Alu -27 285 1 1117 281 130 52 chr2 19475063 19475660 -231212194 - L2 LINE L2 -222 3091 2361 2405 89 0 3 chr2 19475660 19475962 -231211892 + AluY SINE Alu 1 301 -10 1117 281 130 52 chr2 19475962 19476116 -231211738 - L2 LINE L2 -952 2361 2220 276 206 0 16 chr2 19476120 19476183 -231211671 + MER94 DNA DNA 1 62 -72 532 280 148 22 chr2 19476237 19476508 -231211346 - L2 LINE L2 -1081 2233 1929 1825 161 3 7 chr2 19476699 19476991 -231210863 + AluSx SINE Alu 5 295 -17 8088 20 0 0 chr2 19477022 19477988 -231209866 - L1P LINE L1 -1177 4969 4004 7916 19 0 0 chr2 19477988 19478958 -231208896 + L1PA2 LINE L1 5186 6155 0 938 238 50 21 chr2 19478998 19479238 -231208616 - MIR SINE MIR 0 262 16 1993 128 180 11 chr2 19479428 19479794 -231208060 - MSTA LTR MaLR 0 428 1 544 284 103 46 chr2 19480096 19480621 -231207233 - L1ME LINE L1 -302 5819 5265 566 335 80 84 chr2 19481729 19483152 -231204702 + L2 LINE L2 360 1776 -1538 368 240 109 22 chr2 19483412 19483595 -231204259 - L1MC5 LINE L1 -418 7543 7345 1591 210 164 48 chr2 19483595 19484296 -231203558 - L1MC5 LINE L1 -520 7441 6660 1059 297 89 81 chr2 19484302 19485380 -231202474 + L2 LINE L2 1793 2879 -435 388 313 46 8 chr2 19485705 19485836 -231202018 - MIR3 SINE MIR -27 181 46 247 279 29 29 chr2 19486451 19486555 -231201299 - LTR16A1 LTR ERVL -2 455 352 226 214 0 0 chr2 19487301 19487343 -231200511 + L2 LINE L2 3272 3313 0 231 218 23 11 chr2 19487357 19487444 -231200410 + GA-rich Low_complexity Low_complexity 1 88 0 * 493 94 24 12 chr2 19487443 19487528 -231200326 + (GGGAA)n Simple_repeat Simple_repeat 2 87 0 1406 263 44 44 chr2 19487547 19488045 -231199809 - MLT1K LTR MaLR -81 507 10 439 296 74 72 chr2 19488672 19489156 -231198698 + MLT1K LTR MaLR 88 572 -16 256 339 77 23 chr2 19489636 19489766 -231198088 - MIR3 SINE MIR -71 137 1 1612 217 23 45 chr2 19490399 19490869 -231196985 - MLT1C LTR MaLR -7 460 1 580 226 274 5 chr2 19491116 19491328 -231196526 - L2 LINE L2 0 3313 3045 316 239 186 18 chr2 19491446 19491613 -231196241 - L2 LINE L2 -620 2694 2500 2285 101 0 19 chr2 19492435 19492751 -231195103 + AluSg SINE Alu 1 310 0 2119 109 41 22 chr2 19492831 19493199 -231194655 - THE1C LTR MaLR 0 375 1 1300 185 88 69 chr2 19493245 19493678 -231194176 - LTR37B LTR ERV1 -21 447 7 460 91 81 20 chr2 19494928 19495027 -231192827 + L1MB8 LINE L1 6074 6178 0 1512 138 0 5 chr2 19495050 19495267 -231192587 + AluJb SINE Alu 86 301 -11 193 171 98 0 chr2 19496919 19496960 -231190894 + MIR SINE MIR 211 255 -7 562 274 111 0 chr2 19497327 19497561 -231190293 + L1MC4 LINE L1 7783 8042 0 24 0 0 0 chr2 19497624 19497648 -231190206 + AT_rich Low_complexity Low_complexity 1 24 0 238 203 14 29 chr2 19500544 19500613 -231187241 + (TA)n Simple_repeat Simple_repeat 1 68 0 193 125 31 0 chr2 19500840 19500872 -231186982 - MIR SINE MIR -63 145 113 404 220 79 37 chr2 19501591 19501805 -231186049 + L1MC5 LINE L1 7246 7468 -493 365 314 96 29 chr2 19503687 19503967 -231183887 + L1 LINE L1 4721 5019 -1127 1522 110 18 9 chr2 19504258 19504486 -231183368 + AluSq SINE Alu 1 230 -83 869 148 7 0 chr2 19504486 19504621 -231183233 - AluJb SINE Alu -176 136 1 197 386 0 0 chr2 19504639 19504709 -231183145 - L2 LINE L2 -405 2908 2839 546 174 174 0 chr2 19504755 19504945 -231182909 - Charlie4a DNA MER1_type -4 504 282 1420 219 56 23 chr2 19504945 19505288 -231182566 + L1MB2 LINE L1 3100 3465 -2681 2158 108 35 57 chr2 19505288 19505660 -231182194 - THE1B LTR MaLR 0 364 1 1420 219 56 23 chr2 19505660 19505800 -231182054 + L1MB2 LINE L1 3465 3599 -2547 * 3994 186 48 30 chr2 19505788 19505928 -231181926 + L1MB2 LINE L1 4241 4377 -1794 2120 130 3 22 chr2 19505928 19506244 -231181610 + AluSx SINE Alu 1 310 -2 3994 186 48 30 chr2 19506244 19507751 -231180103 + L1MB2 LINE L1 4377 5856 -315 459 0 0 0 chr2 19507751 19507802 -231180052 + (TGG)n Simple_repeat Simple_repeat 1 51 0 3994 186 48 30 chr2 19507802 19507879 -231179975 + L1MB2 LINE L1 5856 5930 -241 846 195 6 18 chr2 19507879 19508043 -231179811 + FRAM SINE Alu 1 162 -4 3994 186 48 30 chr2 19508043 19508100 -231179754 + L1MB2 LINE L1 5930 6170 -1 574 248 141 30 chr2 19508346 19508645 -231179209 + L1M4 LINE L1 3854 4185 -1961 479 251 56 5 chr2 19508703 19508898 -231178956 + L1M4 LINE L1 4656 4860 -1286 486 202 84 0 chr2 19508967 19509086 -231178768 + HAL1b LINE L1 965 1093 -255 2811 206 67 0 chr2 19509105 19509766 -231178088 - L1ME1 LINE L1 -29 6137 5433 1908 125 0 0 chr2 19509834 19510098 -231177756 - AluSg SINE Alu -10 300 37 314 190 99 33 chr2 19510113 19510234 -231177620 + HAL1b LINE L1 965 1093 -255 2510 63 0 13 chr2 19510312 19510627 -231177227 - AluY SINE Alu 0 311 1 1341 36 12 0 chr2 19515791 19515956 -231171898 + L1PA7 LINE L1 5982 6148 -6 22 70 0 0 chr2 19515962 19516005 -231171849 + AT_rich Low_complexity Low_complexity 1 43 0 29 28 0 0 chr2 19516476 19516512 -231171342 + AT_rich Low_complexity Low_complexity 1 36 0 382 77 0 0 chr2 19516663 19516715 -231171139 + L1MA4A LINE L1 5899 5950 -353 593 125 0 0 chr2 19516715 19516803 -231171051 + AluY SINE Alu 212 299 -12 3032 133 30 0 chr2 19516811 19517313 -231170541 + L1PA7 LINE L1 3 519 -5942 19393 111 16 41 chr2 19517415 19518469 -231169385 - L1P3 LINE L1 -2275 4186 3108 2517 80 0 3 chr2 19518469 19518780 -231169074 - AluY SINE Alu -1 310 1 19393 111 16 41 chr2 19518780 19521716 -231166138 - L1P3 LINE L1 -3353 3108 217 26688 81 7 7 chr2 19521816 19523279 -231164575 + L1PA7 LINE L1 1693 3155 -3314 2496 84 0 3 chr2 19523279 19523590 -231164264 + AluY SINE Alu 1 310 -1 26688 81 7 7 chr2 19523590 19526906 -231160948 + L1PA7 LINE L1 3155 6467 -2 3823 96 0 4 chr2 19526927 19527440 -231160414 + MER9 LTR ERVK 1 511 0 20498 70 8 7 chr2 19527440 19528466 -231159388 + HERVK9 LTR ERVK 1 1024 -4892 2395 65 0 0 chr2 19528466 19528757 -231159097 + AluY SINE Alu 1 291 -20 20498 70 8 7 chr2 19528757 19530512 -231157342 + HERVK9 LTR ERVK 1024 2786 -3130 1810 43 0 0 chr2 19530512 19530743 -231157111 + HERVK9 LTR ERVK 3711 3941 -1975 * 7499 80 4 9 chr2 19530742 19531801 -231156053 + HERVK9 LTR ERVK 4582 5634 -282 2167 71 0 0 chr2 19531897 19532179 -231155675 + HERVK9 LTR ERVK 5635 5916 0 3867 76 2 8 chr2 19532179 19532693 -231155161 + MER9 LTR ERVK 1 511 0 459 227 34 102 chr2 19532882 19532991 -231154863 - MIR SINE MIR -1 261 167 2412 77 0 3 chr2 19532991 19533288 -231154566 - AluY SINE Alu -15 296 1 459 227 34 102 chr2 19533288 19533354 -231154500 - MIR SINE MIR -95 167 98 26 0 0 0 chr2 19533425 19533451 -231154403 + AT_rich Low_complexity Low_complexity 1 26 0 347 253 52 71 chr2 19533924 19534078 -231153776 + L1ME4a LINE L1 5959 6109 -12 271 162 54 0 chr2 19534205 19534279 -231153575 + (TA)n Simple_repeat Simple_repeat 2 79 0 828 201 7 13 chr2 19534862 19535016 -231152838 - FRAM SINE Alu -10 156 4 21 0 0 0 chr2 19535023 19535044 -231152810 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 19537001 19537023 -231150831 + AT_rich Low_complexity Low_complexity 1 22 0 450 0 0 0 chr2 19538205 19538255 -231149599 + (CCA)n Simple_repeat Simple_repeat 3 52 0 382 292 104 5 chr2 19538482 19538684 -231149170 - L1ME4a LINE L1 -83 6038 5817 28 79 0 0 chr2 19538684 19538747 -231149107 + AT_rich Low_complexity Low_complexity 1 63 0 328 178 33 33 chr2 19539311 19539401 -231148453 - L1MC5 LINE L1 -181 7780 7691 25 31 0 0 chr2 19539483 19539515 -231148339 + AT_rich Low_complexity Low_complexity 1 32 0 430 224 0 24 chr2 19540572 19540657 -231147197 - L2 LINE L2 0 3313 3231 1519 180 50 44 chr2 19540723 19541085 -231146769 + MLT1A1 LTR MaLR 2 365 0 1100 191 39 14 chr2 19543224 19543506 -231144348 + HAL1b LINE L1 527 815 -533 286 230 201 14 chr2 19543556 19543695 -231144159 + HAL1b LINE L1 895 1059 -289 422 213 91 70 chr2 19543705 19543935 -231143919 + HAL1b LINE L1 1091 1325 -23 210 333 16 0 chr2 19543981 19544044 -231143810 - L2 LINE L2 -8 3264 3201 24 32 0 0 chr2 19544167 19544198 -231143656 + AT_rich Low_complexity Low_complexity 1 31 0 1542 156 10 46 chr2 19544251 19544553 -231143301 + AluJb SINE Alu 1 291 -21 1654 177 54 49 chr2 19544742 19545148 -231142706 + LTR52 LTR ERVL 2 409 -12 342 251 59 148 chr2 19545605 19545876 -231141978 - MIR SINE MIR -14 248 2 516 238 118 48 chr2 19546071 19546386 -231141468 - L1MC5 LINE L1 -20 7941 7605 1885 194 40 40 chr2 19547183 19547652 -231140202 + Charlie7 DNA MER1_type 266 734 -1878 318 186 150 0 chr2 19547661 19547774 -231140080 + Charlie7 DNA MER1_type 2440 2569 -43 646 208 16 0 chr2 19552154 19552279 -231135575 - FLAM_A SINE Alu -6 127 1 25 51 0 0 chr2 19552286 19552325 -231135529 + AT_rich Low_complexity Low_complexity 1 39 0 364 231 105 91 chr2 19552489 19552632 -231135222 - L2 LINE L2 0 3313 3169 903 180 6 6 chr2 19552806 19552973 -231134881 + L1MD2 LINE L1 5834 6000 -359 1074 96 0 0 chr2 19552974 19553120 -231134734 + AluSg/x SINE Alu 165 310 -2 609 234 106 51 chr2 19553138 19553373 -231134481 + L1MD2 LINE L1 6112 6359 0 765 337 139 47 chr2 19553490 19553656 -231134198 - L2 LINE L2 -541 2773 2624 1051 205 0 28 chr2 19553656 19553871 -231133983 - MER3 DNA MER1_type 0 209 1 765 337 139 47 chr2 19553871 19554697 -231133157 - L2 LINE L2 -690 2624 1690 285 299 46 11 chr2 19554775 19554862 -231132992 + L2 LINE L2 3174 3263 -9 289 375 56 7 chr2 19554909 19555080 -231132774 + MIR SINE MIR 16 192 -58 1395 135 4 18 chr2 19556195 19556424 -231131430 - L1PB4 LINE L1 -5 6151 5926 300 227 383 0 chr2 19556425 19556553 -231131301 + MIR SINE MIR 85 261 -1 184 316 92 13 chr2 19556554 19556630 -231131224 - MIR SINE MIR -106 156 75 1195 0 0 0 chr2 19556960 19557093 -231130761 - AluYa5/8 SINE Alu -5 306 174 24 77 0 0 chr2 19557840 19557892 -231129962 + AT_rich Low_complexity Low_complexity 1 52 0 287 268 14 0 chr2 19558191 19558262 -231129592 - MIR3 SINE MIR -4 204 133 2706 152 41 10 chr2 19558339 19559110 -231128744 + L1M4 LINE L1 4976 5777 -407 2080 87 4 4 chr2 19559153 19559428 -231128426 - AluSc SINE Alu -34 275 1 340 303 0 0 chr2 19559620 19559709 -231128145 - MIR SINE MIR -94 168 80 573 258 94 82 chr2 19560561 19560794 -231127060 + MIR SINE MIR 12 247 -15 2493 30 10 0 chr2 19560797 19561095 -231126759 - AluY SINE Alu -10 301 1 825 223 135 9 chr2 19561113 19561328 -231126526 - MIR SINE MIR -9 253 12 2167 115 0 0 chr2 19561733 19562029 -231125825 - AluSx SINE Alu -16 296 1 229 328 148 39 chr2 19562419 19562547 -231125307 + L2 LINE L2 2917 3058 -214 253 292 0 0 chr2 19562568 19562633 -231125221 + L2 LINE L2 3248 3312 -1 269 294 29 0 chr2 19562691 19562759 -231125095 + L2 LINE L2 3203 3272 0 402 231 211 14 chr2 19562796 19562943 -231124911 - L2 LINE L2 -1 3271 3096 192 179 0 0 chr2 19563640 19563679 -231124175 + (TA)n Simple_repeat Simple_repeat 2 40 0 486 269 23 0 chr2 19564493 19564623 -231123231 + MER94 DNA DNA 1 133 -1 8922 105 8 7 chr2 19565084 19566384 -231121470 + HSMAR2 DNA Mariner 1 1301 -1 288 131 16 16 chr2 19566847 19566908 -231120946 + L1MA2 LINE L1 6244 6304 0 25 83 0 0 chr2 19566929 19566989 -231120865 + AT_rich Low_complexity Low_complexity 1 60 0 5144 227 120 74 chr2 19567057 19567898 -231119956 - HAL1 LINE L1 0 2507 1705 1949 95 4 0 chr2 19567898 19568191 -231119663 - AluSx SINE Alu 0 323 30 5144 227 120 74 chr2 19568191 19568548 -231119306 - HAL1 LINE L1 -802 1705 1366 1955 115 0 0 chr2 19568548 19568826 -231119028 - AluSx SINE Alu 0 312 35 5144 227 120 74 chr2 19568826 19569108 -231118746 - HAL1 LINE L1 -1141 1366 1098 2148 103 10 0 chr2 19569108 19569399 -231118455 - AluSx SINE Alu -18 294 1 5144 227 120 74 chr2 19569399 19570306 -231117548 - HAL1 LINE L1 -1409 1098 9 259 321 61 36 chr2 19571498 19571663 -231116191 - HAL1 LINE L1 -1 2506 2338 52 41 0 0 chr2 19571727 19571800 -231116054 + AT_rich Low_complexity Low_complexity 1 73 0 3158 162 131 111 chr2 19571880 19572475 -231115379 - L1MC3 LINE L1 -1 7784 7069 249 215 86 65 chr2 19572475 19572568 -231115286 - MLT1F1 LTR MaLR -442 125 31 3158 162 131 111 chr2 19572568 19572881 -231114973 - L1MC3 LINE L1 -716 7069 6764 1428 241 116 19 chr2 19573007 19573472 -231114382 + LTR33 LTR ERVL 1 510 -11 2441 67 0 0 chr2 19573924 19574222 -231113632 - AluY SINE Alu -13 298 1 525 194 91 24 chr2 19574297 19574462 -231113392 - MER104 DNA MER2_type -1 179 4 35 41 0 0 chr2 19575185 19575234 -231112620 + AT_rich Low_complexity Low_complexity 1 49 0 1205 224 142 17 chr2 19575425 19575777 -231112077 + MSTD LTR MaLR 1 396 0 418 298 92 9 chr2 19576000 19576218 -231111636 - MIR SINE MIR -6 256 21 26 30 0 0 chr2 19576882 19576915 -231110939 + AT_rich Low_complexity Low_complexity 1 33 0 26 0 0 0 chr2 19577151 19577177 -231110677 + AT_rich Low_complexity Low_complexity 1 26 0 32 57 0 0 chr2 19577529 19577582 -231110272 + AT_rich Low_complexity Low_complexity 1 53 0 1832 141 35 0 chr2 19578001 19578285 -231109569 + AluJb SINE Alu 1 294 -18 2233 98 3 0 chr2 19578304 19578609 -231109245 + AluY SINE Alu 1 306 -5 193 315 141 34 chr2 19578926 19579075 -231108779 + MIR SINE MIR 55 219 -43 22 35 0 0 chr2 19579529 19579558 -231108296 + AT_rich Low_complexity Low_complexity 1 29 0 232 186 23 0 chr2 19579956 19579999 -231107855 - L2 LINE L2 0 3313 3270 1039 320 107 85 chr2 19580022 19580596 -231107258 + L2 LINE L2 1314 1874 -1398 656 137 0 17 chr2 19580596 19580713 -231107141 + L1PB4 LINE L1 6041 6155 -1 565 123 0 0 chr2 19580720 19580801 -231107053 + MLT1B LTR MaLR 260 340 -50 1039 320 107 85 chr2 19580801 19580997 -231106857 + L2 LINE L2 1879 2069 -1203 1714 177 0 39 chr2 19580997 19581307 -231106547 - AluJo SINE Alu -14 298 1 1039 320 107 85 chr2 19581307 19582352 -231105502 + L2 LINE L2 2069 3271 -1 336 24 0 0 chr2 19582355 19582396 -231105458 + (CA)n Simple_repeat Simple_repeat 2 42 0 25 31 0 0 chr2 19582413 19582445 -231105409 + AT_rich Low_complexity Low_complexity 1 32 0 233 98 24 0 chr2 19583293 19583334 -231104520 + (TTTC)n Simple_repeat Simple_repeat 4 45 0 306 0 0 0 chr2 19583948 19583982 -231103872 + (CA)n Simple_repeat Simple_repeat 2 35 0 419 309 32 0 chr2 19584366 19584489 -231103365 - L2 LINE L2 0 3272 3146 1030 139 58 97 chr2 19585466 19585698 -231102156 - L1MC4 LINE L1 -190 7852 7629 1709 188 0 3 chr2 19585698 19585991 -231101863 - AluJo SINE Alu -18 294 3 1030 139 58 97 chr2 19585991 19586017 -231101837 - L1MC4 LINE L1 -413 7629 7604 2045 135 77 0 chr2 19586186 19586526 -231101328 + MER47A DNA MER2_type 1 366 0 791 343 34 66 chr2 19587104 19587646 -231100208 - L2 LINE L2 0 3272 2734 402 21 0 0 chr2 19588177 19588224 -231099630 + (TA)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr2 19589755 19589775 -231098079 + (A)n Simple_repeat Simple_repeat 1 20 0 2224 102 0 40 chr2 19589776 19590100 -231097754 + AluSx SINE Alu 1 311 -1 940 287 200 35 chr2 19590105 19590791 -231097063 - L2 LINE L2 -622 2692 1894 825 272 59 25 chr2 19590985 19591309 -231096545 + L1ME4a LINE L1 5539 5873 -248 197 300 38 38 chr2 19591337 19591417 -231096437 + L2 LINE L2 3234 3313 0 2480 75 0 3 chr2 19591716 19592021 -231095833 + AluY SINE Alu 1 304 -7 219 229 0 0 chr2 19592045 19592106 -231095748 + (TA)n Simple_repeat Simple_repeat 2 62 0 550 263 175 18 chr2 19592238 19592455 -231095399 + MIR SINE MIR 9 259 -3 529 256 167 0 chr2 19592480 19592636 -231095218 + MER5A DNA MER1_type 2 183 -6 239 310 21 84 chr2 19592641 19592783 -231095071 - MIR SINE MIR -26 182 49 404 64 0 0 chr2 19596435 19596482 -231091372 + Alu SINE Alu 17 63 -255 584 273 142 14 chr2 19597636 19597911 -231089943 - Charlie2 DNA MER1_type -2471 311 2 297 202 30 40 chr2 19598779 19598878 -231088976 + L1MC5 LINE L1 7832 7929 -32 1956 152 0 10 chr2 19598969 19599278 -231088576 + AluJo SINE Alu 1 306 -6 2233 125 0 0 chr2 19599333 19599645 -231088209 + AluSx SINE Alu 1 312 0 702 153 129 6 chr2 19600392 19600503 -231087351 + L1MB3 LINE L1 4385 4524 -1622 186 71 0 0 chr2 19600503 19600531 -231087323 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 702 153 129 6 chr2 19600531 19600582 -231087272 + L1MB3 LINE L1 4524 4567 -1579 250 196 289 0 chr2 19600580 19600677 -231087177 + L1MB3 LINE L1 5382 5506 -656 * 1294 142 33 0 chr2 19600839 19601050 -231086804 + L1MB3 LINE L1 5966 6183 0 186 200 133 76 chr2 19601096 19601201 -231086653 - L2 LINE L2 -479 2835 2725 219 69 0 0 chr2 19601926 19601955 -231085899 + (CA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 30 chr2 19602619 19602636 -231085218 + AT_rich Low_complexity Low_complexity 1 18 -14 1987 155 3 3 chr2 19602636 19602939 -231084915 + AluJb SINE Alu 1 303 -9 22 0 0 30 chr2 19602939 19602954 -231084900 + AT_rich Low_complexity Low_complexity 18 32 0 481 175 117 33 chr2 19603020 19603140 -231084714 + MIR SINE MIR 1 130 -132 201 333 16 0 chr2 19603163 19603226 -231084628 + L2 LINE L2 3233 3296 -17 216 0 0 0 chr2 19603789 19603813 -231084041 + (A)n Simple_repeat Simple_repeat 1 24 0 201 261 148 23 chr2 19605071 19605159 -231082695 - MIR3 SINE MIR 0 208 110 2648 183 71 23 chr2 19605261 19605836 -231082018 - L1MC4a LINE L1 0 7808 7206 279 0 0 0 chr2 19606324 19606355 -231081499 + (CA)n Simple_repeat Simple_repeat 2 32 0 330 326 118 0 chr2 19606369 19606513 -231081341 + MIR3 SINE MIR 19 179 -29 1364 197 42 28 chr2 19606780 19607064 -231080790 - AluJo SINE Alu -24 288 1 223 244 0 0 chr2 19609738 19609779 -231078075 + (CACG)n Simple_repeat Simple_repeat 3 43 0 2368 71 31 0 chr2 19611091 19611385 -231076469 + AluY SINE Alu 1 303 -8 2294 82 0 3 chr2 19611403 19611694 -231076160 + AluSq SINE Alu 3 292 -21 239 296 93 28 chr2 19611834 19611942 -231075912 - L2 LINE L2 0 3313 3199 2229 120 0 0 chr2 19612119 19612418 -231075436 - AluSx SINE Alu -13 299 1 403 209 180 22 chr2 19612791 19612934 -231074920 - MIR SINE MIR -64 144 25 1856 156 3 13 chr2 19613100 19613402 -231074452 + AluJo SINE Alu 3 301 -11 2981 67 0 0 chr2 19613448 19613804 -231074050 + L1PA8 LINE L1 5806 6161 -11 2391 132 25 35 chr2 19613820 19614223 -231073631 + MER4E LTR ERV1 340 738 -28 2119 194 72 33 chr2 19614522 19615007 -231072847 + MLT1D LTR MaLR 1 504 -1 232 250 130 22 chr2 19616333 19616425 -231071429 + MIR SINE MIR 30 131 -77 25 0 0 0 chr2 19616755 19616780 -231071074 + GC_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr2 19616850 19616881 -231070973 + GC_rich Low_complexity Low_complexity 1 31 0 244 353 108 24 chr2 19617558 19617725 -231070129 - L2 LINE L2 -100 3172 2992 2039 171 28 7 chr2 19617809 19618214 -231069640 + L1MB3 LINE L1 5681 6087 -64 471 246 11 94 chr2 19618335 19618390 -231069464 + LTR67 LTR ERVL 2 60 -497 3228 143 11 46 chr2 19618390 19618929 -231068925 - MLT2B1 LTR ERVL 0 520 1 471 246 11 94 chr2 19618929 19619064 -231068790 + LTR67 LTR ERVL 60 176 -381 445 285 28 28 chr2 19619060 19619204 -231068650 + LTR67 LTR ERVL 337 480 -77 * 414 218 135 53 chr2 19619204 19619374 -231068480 + MER91B DNA MER1_type 2 185 -5 1757 167 0 61 chr2 19619399 19619729 -231068125 - AluJo SINE Alu -2 310 1 21 0 0 0 chr2 19620348 19620369 -231067485 + AT_rich Low_complexity Low_complexity 1 21 0 285 257 316 27 chr2 19620558 19620745 -231067109 - MLT1J LTR MaLR -172 339 99 30 0 0 0 chr2 19621340 19621370 -231066484 + AT_rich Low_complexity Low_complexity 1 30 0 1790 157 21 11 chr2 19621373 19621654 -231066200 + AluJo SINE Alu 1 284 -28 337 241 25 135 chr2 19622160 19622260 -231065594 + MER112 DNA MER1_type 8 67 -193 2009 103 3 51 chr2 19622260 19622571 -231065283 - AluY SINE Alu -15 296 1 337 241 25 135 chr2 19622571 19622715 -231065139 + MER112 DNA MER1_type 67 225 -35 190 333 0 15 chr2 19622858 19622924 -231064930 + L2 LINE L2 3188 3252 -61 894 259 92 14 chr2 19623414 19623708 -231064146 - MLT1I LTR MaLR -2 407 91 311 246 48 24 chr2 19624356 19624482 -231063372 - MER5A DNA MER1_type 0 189 61 2582 124 22 0 chr2 19624487 19624843 -231063011 - THE1B LTR MaLR 0 364 1 11415 110 7 33 chr2 19624843 19626464 -231061390 - THE1B-int LTR MaLR 0 1580 2 2562 124 22 0 chr2 19626484 19626840 -231061014 - THE1B LTR MaLR 0 364 1 910 265 152 7 chr2 19627425 19627859 -231059995 - L1ME4a LINE L1 -1 6120 5624 211 368 60 40 chr2 19627896 19628198 -231059656 + L2 LINE L2 2179 2486 -828 1402 256 30 57 chr2 19628323 19628720 -231059134 + L1MEc LINE L1 1262 1641 -4755 2077 88 0 0 chr2 19628720 19628980 -231058874 - AluSg SINE Alu -16 294 35 1402 256 30 57 chr2 19628980 19629145 -231058709 + L1MEc LINE L1 1641 1809 -4587 855 243 28 0 chr2 19629174 19629355 -231058499 + AluJo SINE Alu 115 300 -12 2116 183 34 105 chr2 19629523 19629914 -231057940 + MER44D DNA MER2_type 4 396 -2091 8083 29 5 0 chr2 19629914 19631258 -231056596 + L1PA3 LINE L1 4808 6155 0 2116 183 34 105 chr2 19631258 19631455 -231056399 + MER44D DNA MER2_type 396 605 0 319 335 26 42 chr2 19631618 19631809 -231056045 - MIR SINE MIR -64 198 11 1228 135 96 0 chr2 19632442 19632650 -231055204 - L1PA15-16 LINE L1 -4222 2627 2400 940 138 0 0 chr2 19632650 19632780 -231055074 - AluSq/x SINE Alu -183 130 1 8531 160 45 33 chr2 19632783 19634341 -231053513 + L1PA15 LINE L1 3473 5011 -1154 2490 121 81 8 chr2 19634341 19634738 -231053116 - MSTA LTR MaLR -2 426 1 8531 160 45 33 chr2 19634738 19635038 -231052816 + L1PA15 LINE L1 5011 5306 -859 203 0 37 0 chr2 19635038 19635065 -231052789 + (CAA)n Simple_repeat Simple_repeat 2 29 0 8531 160 45 33 chr2 19635065 19635083 -231052771 + L1PA15 LINE L1 5306 5322 -843 2221 116 0 3 chr2 19635083 19635385 -231052469 + AluSx SINE Alu 1 301 -11 8531 160 45 33 chr2 19635385 19636185 -231051669 + L1PA15 LINE L1 5322 6165 0 1989 173 9 9 chr2 19636332 19636667 -231051187 + MER2 DNA MER2_type 1 335 -10 192 271 51 0 chr2 19639767 19639826 -231048028 - L2 LINE L2 -4 3309 3248 290 279 13 0 chr2 19640640 19640719 -231047135 + L2 LINE L2 3193 3272 0 26 0 0 0 chr2 19641841 19641867 -231045987 + AT_rich Low_complexity Low_complexity 1 26 0 1814 126 4 0 chr2 19642578 19642825 -231045029 - AluSx SINE Alu -12 300 53 682 229 0 0 chr2 19642852 19642974 -231044880 + FLAM_C SINE Alu 5 126 -17 2127 123 14 0 chr2 19643076 19643368 -231044486 - AluSx SINE Alu -15 297 2 1153 213 161 0 chr2 19643624 19643873 -231043981 + AluJo SINE Alu 1 289 -13 21 36 0 0 chr2 19643874 19643902 -231043952 + AT_rich Low_complexity Low_complexity 1 28 0 2177 84 38 3 chr2 19643926 19644213 -231043641 + AluSp SINE Alu 1 297 -16 788 203 0 0 chr2 19644213 19644351 -231043503 - MLT1A1 LTR MaLR -227 138 1 1636 190 64 0 chr2 19644666 19644993 -231042861 + MER7A DNA MER2_type 1 346 0 30 45 0 0 chr2 19645334 19645378 -231042476 + AT_rich Low_complexity Low_complexity 1 44 0 180 344 21 10 chr2 19645482 19645578 -231042276 - L3 LINE CR1 -5 1572 1476 279 79 0 0 chr2 19645670 19645708 -231042146 + (TG)n Simple_repeat Simple_repeat 1 38 0 1788 154 4 4 chr2 19645710 19645989 -231041865 - AluSx SINE Alu -33 279 1 453 320 190 23 chr2 19646016 19646286 -231041568 - L3 LINE CR1 -291 1286 1062 843 174 0 0 chr2 19646286 19646418 -231041436 - FLAM_C SINE Alu -1 132 1 453 320 190 23 chr2 19646418 19646722 -231041132 - L3 LINE CR1 -515 1062 616 187 352 71 36 chr2 19646792 19647045 -231040809 - L3 LINE CR1 -1131 446 185 1002 81 0 0 chr2 19647106 19647230 -231040624 - AluSg/x SINE Alu -25 287 164 960 136 0 0 chr2 19647231 19647363 -231040491 - AluSg/x SINE Alu -17 295 164 2205 116 3 3 chr2 19647365 19647667 -231040187 - AluSx SINE Alu -10 302 1 428 303 81 11 chr2 19647857 19648042 -231039812 - MIR SINE MIR -6 256 59 554 156 73 18 chr2 19648651 19648760 -231039094 + FLAM_A SINE Alu 17 131 -11 840 153 0 0 chr2 19649071 19649195 -231038659 - FLAM_C SINE Alu -18 125 2 898 161 87 0 chr2 19649472 19649633 -231038221 + FAM SINE Alu 1 175 0 2774 45 0 23 chr2 19650161 19650514 -231037340 + L1PA6 LINE L1 5808 6152 -2 904 152 0 36 chr2 19650648 19650813 -231037041 - AluJb SINE Alu -21 291 133 575 112 49 0 chr2 19650813 19650956 -231036898 + (TA)n Simple_repeat Simple_repeat 2 151 0 802 99 54 0 chr2 19650959 19651070 -231036784 - AluJb SINE Alu -187 125 9 2329 93 3 3 chr2 19651260 19651561 -231036293 + AluSc SINE Alu 1 301 -8 2825 19 0 0 chr2 19651561 19651869 -231035985 + AluYb8 SINE Alu 1 308 -10 334 225 19 2 chr2 19651915 19652015 -231035839 + L1MC5 LINE L1 7832 8041 -1 220 234 78 0 chr2 19652045 19652109 -231035745 - L2 LINE L2 -307 2965 2897 218 307 53 18 chr2 19653932 19654046 -231033808 - L2 LINE L2 -1903 1411 1294 707 196 68 41 chr2 19656669 19656888 -231030966 + LTR37A LTR ERV1 200 424 -2 227 279 16 0 chr2 19657025 19657086 -231030768 + L2 LINE L2 3160 3221 -92 294 268 198 6 chr2 19657262 19657419 -231030435 - MIR SINE MIR -25 237 51 612 216 12 54 chr2 19657427 19657594 -231030260 - MER5B DNA MER1_type 0 178 19 2571 68 0 3 chr2 19657678 19657985 -231029869 + AluSp SINE Alu 1 306 -7 1891 136 22 44 chr2 19658141 19658458 -231029396 + LTR32 LTR ERVL 22 331 -140 753 163 6 84 chr2 19658559 19658725 -231029129 + LTR32 LTR ERVL 319 471 0 251 281 98 34 chr2 19659175 19659410 -231028444 + L2 LINE L2 1917 2166 -1148 652 103 0 0 chr2 19659448 19659535 -231028319 - MSTA LTR MaLR 0 428 342 1752 169 23 7 chr2 19659562 19659863 -231027991 + AluSx SINE Alu 1 306 -6 2470 241 97 21 chr2 19659911 19660998 -231026856 + HAL1 LINE L1 673 1881 -626 1311 246 80 44 chr2 19661043 19661632 -231026222 + HAL1 LINE L1 1690 2299 -208 4139 135 19 56 chr2 19661634 19662405 -231025449 + L1MA5 LINE L1 5558 6300 0 352 196 21 0 chr2 19662425 19662499 -231025355 + AluJ/FLAM SINE Alu 2 63 -239 * 4306 163 30 57 chr2 19662493 19663527 -231024327 + Charlie1 DNA MER1_type 1755 2760 -1 846 136 0 0 chr2 19663686 19663804 -231024050 - FLAM_C SINE Alu -25 118 1 2148 156 40 3 chr2 19663831 19664177 -231023677 - MLT1A1 LTR MaLR -6 359 1 206 238 0 0 chr2 19664250 19664292 -231023562 + MIR SINE MIR 108 149 -113 705 239 48 0 chr2 19665040 19665207 -231022647 - MLT1C LTR MaLR 0 467 293 2479 90 8 8 chr2 19665224 19665578 -231022276 - L1PA11 LINE L1 0 6174 5821 361 228 51 0 chr2 19665856 19665935 -231021919 - MLT1A1 LTR MaLR 0 365 283 255 125 0 0 chr2 19667277 19667317 -231020537 + (A)n Simple_repeat Simple_repeat 1 40 0 2284 92 89 15 chr2 19667358 19667696 -231020158 + THE1B LTR MaLR 2 364 0 528 16 0 0 chr2 19668131 19668192 -231019662 + (TATG)n Simple_repeat Simple_repeat 2 62 0 836 72 0 0 chr2 19668192 19668289 -231019565 - AluSc SINE Alu -27 282 186 429 292 20 55 chr2 19668326 19668528 -231019326 + MIR3 SINE MIR 4 198 -10 958 236 71 63 chr2 19668953 19669347 -231018507 + MLT2C1 LTR ERVL 1 397 0 2875 220 70 16 chr2 19671127 19671801 -231016053 - L1ME1 LINE L1 -5 6161 5444 2610 91 89 5 chr2 19671801 19672196 -231015658 + MSTA LTR MaLR 1 428 0 2875 220 70 16 chr2 19672196 19672253 -231015601 - L1ME1 LINE L1 -722 5444 5391 407 172 141 10 chr2 19672362 19672461 -231015393 + L1MC4a LINE L1 5669 5780 -2028 1347 213 60 81 chr2 19672463 19672932 -231014922 - MLT2C2 LTR ERVL 0 464 6 2379 106 0 0 chr2 19672937 19673240 -231014614 + AluSc SINE Alu 1 303 -6 2030 128 0 3 chr2 19673247 19673571 -231014283 + AluSg SINE Alu 1 323 0 324 209 29 101 chr2 19673585 19673625 -231014229 + L1MC4a LINE L1 5791 5832 -1976 2288 102 3 0 chr2 19673625 19673919 -231013935 + AluSx SINE Alu 2 296 -16 324 209 29 101 chr2 19673919 19674017 -231013837 + L1MC4a LINE L1 5832 5919 -1889 22 0 0 0 chr2 19674017 19674039 -231013815 + AT_rich Low_complexity Low_complexity 1 22 0 2918 116 24 0 chr2 19674039 19674462 -231013392 - MER7C DNA MER2_type 0 602 170 985 72 14 29 chr2 19674462 19674601 -231013253 - MER1B DNA MER1_type 0 339 203 1528 143 0 0 chr2 19674634 19674850 -231013004 - MER1B DNA MER1_type -81 216 1 760 193 93 0 chr2 19674850 19675000 -231012854 - MER7C DNA MER2_type -425 177 14 2020 108 0 94 chr2 19675060 19675402 -231012452 + AluSg SINE Alu 1 310 0 1818 163 10 27 chr2 19676883 19677183 -231010671 + AluJo SINE Alu 1 295 -17 390 239 91 34 chr2 19677385 19677594 -231010260 + L2 LINE L2 2435 2655 -659 378 185 23 123 chr2 19677983 19678113 -231009741 + LTR4 LTR ERV1 1 117 -479 661 251 14 28 chr2 19678393 19678608 -231009246 + LTR4 LTR ERV1 385 596 0 588 263 0 0 chr2 19678883 19678997 -231008857 + MER81 DNA DNA 1 114 0 365 250 46 61 chr2 19679926 19680090 -231007764 + L1M4 LINE L1 2197 2350 -3796 1902 162 0 3 chr2 19680090 19680380 -231007474 - AluJo SINE Alu -23 289 1 365 250 46 61 chr2 19680380 19680509 -231007345 + L1M4 LINE L1 2350 2479 -3667 2291 225 50 16 chr2 19681603 19682105 -231005749 + LTR40a LTR ERVL 1 519 0 182 277 0 0 chr2 19682176 19682223 -231005631 + L2 LINE L2 3214 3260 -12 192 256 144 40 chr2 19684993 19685118 -231002736 - MIR SINE MIR -56 206 69 275 183 140 85 chr2 19685532 19685595 -231002259 - LTR33 LTR ERVL -53 468 410 665 137 9 142 chr2 19685595 19685743 -231002111 + MER53 DNA DNA 4 117 -72 2409 85 0 3 chr2 19685743 19686038 -231001816 + AluSp SINE Alu 1 294 -19 665 137 9 142 chr2 19686038 19686101 -231001753 + MER53 DNA DNA 117 187 -2 275 183 140 85 chr2 19686101 19686201 -231001653 - LTR33 LTR ERVL -111 410 296 776 215 112 18 chr2 19686345 19686602 -231001252 + MSTD LTR MaLR 1 339 -57 726 132 0 0 chr2 19686607 19686713 -231001141 - AluSg/x SINE Alu -1 311 206 2594 108 58 23 chr2 19686713 19687148 -231000706 + LTR7 LTR ERV1 1 450 0 14333 111 11 19 chr2 19687170 19690458 -230997396 + HERVH LTR ERV1 4 3736 -3977 6317 126 25 4 chr2 19690451 19691454 -230996400 + HERVH LTR ERV1 3962 4992 -2287 * 2617 90 34 15 chr2 19691433 19691843 -230996011 + HERVH LTR ERV1 7296 7713 0 * 2360 113 55 25 chr2 19691843 19692278 -230995576 + LTR7 LTR ERV1 1 448 -2 1492 130 5 0 chr2 19692280 19692488 -230995366 - AluSq SINE Alu -104 209 1 446 116 0 0 chr2 19692489 19692558 -230995296 + MSTD LTR MaLR 328 396 0 241 237 172 43 chr2 19692558 19692651 -230995203 - LTR33 LTR ERVL -416 105 1 263 386 18 0 chr2 19692921 19693035 -230994819 - MIR3 SINE MIR -9 199 84 2169 120 47 3 chr2 19693752 19694111 -230993743 + LTR8A LTR ERV1 1 375 -352 23 0 0 0 chr2 19694706 19694729 -230993125 + AT_rich Low_complexity Low_complexity 1 23 0 309 141 13 26 chr2 19695146 19695224 -230992630 + GA-rich Low_complexity Low_complexity 4 80 0 235 263 62 94 chr2 19696423 19696583 -230991271 + MER91A DNA MER1_type 40 194 -2 248 297 40 0 chr2 19697369 19697443 -230990411 + MLT1L LTR MaLR 114 190 -425 180 374 10 10 chr2 19698632 19698731 -230989123 - L2 LINE L2 -206 3066 2968 1075 271 61 44 chr2 19698954 19699430 -230988424 - HAL1 LINE L1 -135 2372 1889 1973 193 92 22 chr2 19699441 19699949 -230987905 - HAL1 LINE L1 -693 1814 1271 278 300 56 0 chr2 19700316 19700406 -230987448 + MIR3 SINE MIR 113 207 -1 1794 179 0 3 chr2 19700964 19701249 -230986605 + AluJo SINE Alu 1 284 -28 2666 51 0 3 chr2 19701348 19701660 -230986194 + AluY SINE Alu 1 311 0 1133 191 106 34 chr2 19702702 19702844 -230985010 - Charlie1b DNA MER1_type -2272 489 359 2201 103 12 38 chr2 19702844 19703163 -230984691 - AluSx SINE Alu -1 311 1 1133 191 106 34 chr2 19703163 19703398 -230984456 - Charlie1b DNA MER1_type -2402 359 85 296 272 33 33 chr2 19703438 19703530 -230984324 - Charlie1b DNA MER1_type -431 92 1 2457 79 0 31 chr2 19703555 19703873 -230983981 + AluSq SINE Alu 4 311 -2 270 0 0 0 chr2 19703963 19703993 -230983861 + (T)n Simple_repeat Simple_repeat 1 30 0 758 215 112 18 chr2 19704782 19705039 -230982815 + MSTD LTR MaLR 1 339 -57 1941 135 16 38 chr2 19705044 19705362 -230982492 - AluSx SINE Alu -1 311 1 903 185 86 22 chr2 19705365 19705597 -230982257 - Charlie1b DNA MER1_type -192 331 85 296 272 33 33 chr2 19705637 19705729 -230982125 - Charlie1b DNA MER1_type -431 92 1 2457 79 0 31 chr2 19705754 19706072 -230981782 + AluSq SINE Alu 4 311 -2 270 0 0 0 chr2 19706162 19706192 -230981662 + (T)n Simple_repeat Simple_repeat 1 30 0 388 259 118 18 chr2 19706895 19707065 -230980789 + MIR SINE MIR 28 214 -48 219 222 51 86 chr2 19707065 19707182 -230980672 + MIR SINE MIR 26 138 -70 * 1071 264 49 30 chr2 19707156 19707752 -230980102 + L2 LINE L2 2518 3124 -189 302 306 35 0 chr2 19707802 19707887 -230979967 + MIR3 SINE MIR 114 201 -7 269 264 56 0 chr2 19708170 19708242 -230979612 + Charlie1 DNA MER1_type 1 76 -2685 184 302 146 0 chr2 19708259 19708355 -230979499 + L2 LINE L2 2596 2705 -609 374 153 133 0 chr2 19708467 19708565 -230979289 - MER65A LTR ERV1 0 445 335 * 482 206 9 0 chr2 19708537 19708644 -230979210 + MER65A LTR ERV1 338 445 0 1486 127 6 106 chr2 19708661 19708723 -230979131 - MER65A LTR ERV1 -154 291 224 1790 155 49 11 chr2 19708723 19709007 -230978847 + AluJo SINE Alu 1 295 -17 818 54 18 0 chr2 19709007 19709118 -230978736 + (GGAGAA)n Simple_repeat Simple_repeat 3 115 0 1486 127 6 106 chr2 19709118 19709376 -230978478 - MER65A LTR ERV1 -219 226 2 4106 190 69 1 chr2 19709377 19710247 -230977607 - MER65A-int LTR ERV1 0 4871 3943 2249 113 7 0 chr2 19710442 19710742 -230977112 - AluSx SINE Alu -10 302 1 180 304 98 22 chr2 19710839 19710931 -230976923 + MIR SINE MIR 64 162 -100 2955 126 310 11 chr2 19712345 19712981 -230974873 - LTR12 LTR ERV1 0 826 1 702 173 48 129 chr2 19713163 19713434 -230974420 - pTR5 LTR ERV1 -1447 991 743 2219 114 0 3 chr2 19713526 19713832 -230974022 + AluY SINE Alu 1 305 -6 1849 150 40 7 chr2 19714400 19714700 -230973154 + AluJb SINE Alu 1 310 -2 2341 87 0 37 chr2 19714706 19715027 -230972827 + AluY SINE Alu 1 309 -2 1063 259 17 4 chr2 19715588 19715820 -230972034 + MIR SINE MIR 28 262 0 334 357 30 6 chr2 19715910 19716078 -230971776 - MIR SINE MIR -62 200 29 2274 82 3 54 chr2 19716202 19716519 -230971335 - AluSg SINE Alu -9 301 1 1509 233 159 30 chr2 19716679 19717206 -230970648 - MLT1G1 LTR MaLR 0 595 1 358 203 203 63 chr2 19718505 19718571 -230969283 - MIR SINE MIR 0 262 207 2202 110 0 0 chr2 19718571 19718879 -230968975 - AluSq SINE Alu 0 308 1 358 203 203 63 chr2 19718879 19718954 -230968900 - MIR SINE MIR -55 207 100 601 157 28 0 chr2 19719470 19719578 -230968276 + MIR SINE MIR 41 151 -111 213 241 69 17 chr2 19720247 19720305 -230967549 - MIR SINE MIR -70 192 132 215 191 24 0 chr2 19722855 19722897 -230964957 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 707 225 16 0 chr2 19722899 19723153 -230964701 + (CATA)n Simple_repeat Simple_repeat 1 258 0 261 140 0 35 chr2 19723153 19723210 -230964644 - MER4-int LTR ERV1 -5433 1165 1111 267 244 0 0 chr2 19723210 19723288 -230964566 + (CA)n Simple_repeat Simple_repeat 2 79 0 1627 170 89 23 chr2 19723389 19723736 -230964118 + MLT1B LTR MaLR 1 370 -20 245 172 0 65 chr2 19724188 19724281 -230963573 + GA-rich Low_complexity Low_complexity 2 88 0 460 160 0 93 chr2 19724297 19724491 -230963363 + GA-rich Low_complexity Low_complexity 3 178 0 245 284 66 112 chr2 19725657 19725827 -230962027 + L2 LINE L2 1553 1729 -1585 2277 95 3 3 chr2 19725827 19726112 -230961742 + AluSx SINE Alu 1 285 -27 300 111 0 0 chr2 19726112 19726157 -230961697 + (CA)n Simple_repeat Simple_repeat 2 46 0 245 284 66 112 chr2 19726157 19726333 -230961521 + L2 LINE L2 1727 1884 -1430 1566 165 39 11 chr2 19726338 19726585 -230961269 + AluJo SINE Alu 30 286 -26 672 77 0 0 chr2 19726585 19726676 -230961178 + (GGAA)n Simple_repeat Simple_repeat 2 92 0 1566 165 39 11 chr2 19726676 19726688 -230961166 + AluJo SINE Alu 286 296 -16 356 95 16 16 chr2 19726692 19726735 -230961119 + AluS SINE Alu 2 44 -259 310 91 0 0 chr2 19726735 19726779 -230961075 + Alu SINE Alu 1 44 -257 2357 114 0 0 chr2 19726779 19727087 -230960767 + AluSg SINE Alu 1 308 -2 349 187 11 22 chr2 19727087 19727178 -230960676 + GA-rich Low_complexity Low_complexity 1 90 0 1348 322 122 12 chr2 19727180 19727932 -230959922 + L2 LINE L2 1878 2743 -571 2331 106 0 0 chr2 19727932 19728225 -230959629 - AluSx SINE Alu -19 293 1 1348 322 122 12 chr2 19728225 19728359 -230959495 + L2 LINE L2 2743 2861 -453 485 356 13 43 chr2 19728434 19728737 -230959117 + L2 LINE L2 2977 3270 -2 260 297 39 50 chr2 19728846 19729028 -230958826 - L2 LINE L2 -165 3107 2928 1326 173 107 15 chr2 19729756 19730027 -230957827 - AluJo SINE Alu -6 296 1 1871 162 29 19 chr2 19730081 19730390 -230957464 - AluJo SINE Alu 0 312 1 703 296 62 65 chr2 19730428 19730861 -230956993 - MLT1K LTR MaLR -60 528 97 638 270 86 95 chr2 19731627 19731800 -230956054 + MLT1H LTR MaLR 3 176 -370 1929 182 0 3 chr2 19731800 19732107 -230955747 + AluJo SINE Alu 1 306 -6 638 270 86 95 chr2 19732107 19732449 -230955405 + MLT1H LTR MaLR 176 542 -4 181 246 246 0 chr2 19733161 19733218 -230954636 - L2 LINE L2 -1 3271 3201 181 264 28 28 chr2 19733383 19733455 -230954399 - MIR SINE MIR -9 253 182 21 36 0 0 chr2 19733478 19733506 -230954348 + AT_rich Low_complexity Low_complexity 1 28 0 1847 158 3 54 chr2 19733811 19734127 -230953727 + AluSx SINE Alu 1 300 -12 555 272 17 56 chr2 19734165 19734397 -230953457 - L1MC/D LINE L1 -1994 5814 5592 736 152 15 8 chr2 19734421 19734553 -230953301 - AluJb SINE Alu -178 134 2 206 207 45 18 chr2 19734740 19734851 -230953003 + (TA)n Simple_repeat Simple_repeat 1 114 0 561 274 36 32 chr2 19734929 19735148 -230952706 + MLT1K LTR MaLR 363 582 -6 196 310 14 0 chr2 19735152 19735223 -230952631 - MIR SINE MIR -175 87 16 297 0 0 0 chr2 19735748 19735781 -230952073 + (TG)n Simple_repeat Simple_repeat 2 34 0 207 307 188 33 chr2 19736027 19736330 -230951524 + L2 LINE L2 2567 2916 -398 1898 199 68 33 chr2 19736336 19736823 -230951031 - MLT1D LTR MaLR -1 504 1 218 270 79 32 chr2 19736866 19736929 -230950925 + MER91A DNA MER1_type 123 188 -8 243 282 55 80 chr2 19736934 19737097 -230950757 + L2 LINE L2 2954 3112 -160 998 271 66 3 chr2 19737482 19737847 -230950007 + HAL1 LINE L1 4 391 -2116 405 295 78 6 chr2 19737961 19738127 -230949727 + HAL1 LINE L1 605 782 -1725 1269 232 54 37 chr2 19738138 19738209 -230949645 + HAL1 LINE L1 1033 1101 -1406 2850 105 19 0 chr2 19738209 19738629 -230949225 - MSTA LTR MaLR 0 428 1 1269 232 54 37 chr2 19738629 19739229 -230948625 + HAL1 LINE L1 1101 1818 -689 1141 144 6 0 chr2 19739682 19739849 -230948005 + AluSg/x SINE Alu 129 296 -16 476 293 25 6 chr2 19739982 19740139 -230947715 + L1ME3A LINE L1 6010 6169 -1 256 250 29 0 chr2 19740937 19741005 -230946849 - LTR67 LTR ERVL -431 126 57 1844 112 108 7 chr2 19741511 19741789 -230946065 - AluSx SINE Alu -6 306 1 371 266 65 53 chr2 19742910 19743079 -230944775 - MIR3 SINE MIR -21 187 17 261 307 11 11 chr2 19743573 19743661 -230944193 + MIR SINE MIR 28 115 -147 999 291 35 38 chr2 19743961 19744384 -230943470 + L1ME1 LINE L1 5740 6161 -5 378 234 9 37 chr2 19745143 19745250 -230942604 - MLT1K LTR MaLR -31 557 454 276 293 10 10 chr2 19745258 19745357 -230942497 + CT-rich Low_complexity Low_complexity 2 100 0 225 317 58 8 chr2 19746793 19746913 -230940941 - MIR SINE MIR -61 147 22 302 239 68 0 chr2 19747791 19747879 -230939975 - MIR3 SINE MIR -8 200 107 561 170 113 50 chr2 19748388 19748529 -230939325 + MER5A DNA MER1_type 40 189 0 398 298 33 8 chr2 19749006 19749127 -230938727 + MER91A DNA MER1_type 3 126 -70 268 299 43 8 chr2 19749962 19750079 -230937775 - L1ME4a LINE L1 -38 6083 5963 798 197 11 38 chr2 19752675 19752858 -230934996 + MER5B DNA MER1_type 1 178 0 225 364 63 38 chr2 19752987 19753226 -230934628 + L2 LINE L2 2974 3218 -54 201 74 0 0 chr2 19753369 19753396 -230934458 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 2099 157 12 30 chr2 19753540 19753804 -230934050 + L1MB7 LINE L1 5751 6005 -179 2242 101 0 36 chr2 19753804 19754111 -230933743 - AluSx SINE Alu -16 296 1 2099 157 12 30 chr2 19754111 19754272 -230933582 + L1MB7 LINE L1 6005 6168 -16 314 242 15 91 chr2 19754314 19754446 -230933408 - MER5A DNA MER1_type -5 184 63 519 275 22 55 chr2 19755372 19755590 -230932264 - MIR SINE MIR -6 256 42 254 329 71 0 chr2 19755865 19756020 -230931834 + L2 LINE L2 2797 2962 -352 411 237 132 0 chr2 19756058 19756172 -230931682 + L2 LINE L2 3185 3313 0 326 292 189 11 chr2 19756186 19756446 -230931408 + L2 LINE L2 3008 3313 0 21 0 0 0 chr2 19757600 19757621 -230930233 + AT_rich Low_complexity Low_complexity 1 21 0 4319 163 21 51 chr2 19757736 19758139 -230929715 - L1MB4 LINE L1 -11 6169 5755 234 0 0 0 chr2 19758139 19758165 -230929689 + (TA)n Simple_repeat Simple_repeat 1 26 0 4319 163 21 51 chr2 19758165 19758642 -230929212 - L1MB4 LINE L1 -425 5755 5318 2151 131 10 0 chr2 19758642 19758947 -230928907 - AluSx SINE Alu -3 309 2 4319 163 21 51 chr2 19758947 19759089 -230928765 - L1MB4 LINE L1 -862 5318 5173 937 274 151 9 chr2 19759342 19759780 -230928074 - L2 LINE L2 -1 3312 2813 2067 145 95 25 chr2 19759786 19760186 -230927668 + MSTA LTR MaLR 1 428 0 1659 183 4 25 chr2 19760230 19760509 -230927345 + AluJo SINE Alu 1 273 -39 616 138 0 0 chr2 19760509 19760603 -230927251 + AluJb SINE Alu 203 296 -16 825 298 147 25 chr2 19760675 19761246 -230926608 - L2 LINE L2 -675 2639 1999 251 54 27 0 chr2 19761340 19761377 -230926477 + (TC)n Simple_repeat Simple_repeat 1 38 0 2145 141 3 0 chr2 19761377 19761674 -230926180 - AluSx SINE Alu -14 298 1 471 231 75 12 chr2 19762227 19762387 -230925467 - L2 LINE L2 -1313 2001 1832 813 191 96 50 chr2 19762401 19762621 -230925233 - MIR SINE MIR 0 262 33 196 273 0 0 chr2 19762618 19762662 -230925192 - L2 LINE L2 -1510 1804 1761 * 1383 230 31 49 chr2 19762662 19763053 -230924801 - MLT1J1 LTR MaLR 0 446 63 834 309 90 17 chr2 19763140 19763674 -230924180 - L2 LINE L2 -1554 1760 1188 960 300 76 15 chr2 19763734 19764346 -230923508 - L1ME3 LINE L1 -336 5826 5152 1845 172 21 0 chr2 19764346 19764631 -230923223 - AluJo SINE Alu -15 297 7 960 300 76 15 chr2 19764631 19764812 -230923042 - L1ME3 LINE L1 -1010 5152 4983 * 4701 176 42 32 chr2 19764779 19766310 -230921544 - L1MD1 LINE L1 0 6242 4688 266 330 72 21 chr2 19766340 19766673 -230921181 - L1MB4 LINE L1 -1063 5083 4734 1038 171 0 0 chr2 19766806 19766964 -230920890 - AluJb SINE Alu -18 294 137 1027 242 45 14 chr2 19766967 19767256 -230920598 + MER93a LTR ERV1 101 398 -4 2015 134 10 3 chr2 19767262 19767552 -230920302 - AluSx SINE Alu -20 292 1 415 303 81 10 chr2 19767555 19767951 -230919903 - L1MB4 LINE L1 -1397 4749 4326 451 210 36 90 chr2 19769050 19769217 -230918637 - MER113 DNA MER1_type? -4 517 360 2232 108 3 0 chr2 19769348 19769635 -230918219 + AluSx SINE Alu 1 288 -24 323 211 39 29 chr2 19769672 19769776 -230918078 - MER113 DNA MER1_type? -408 113 9 237 264 11 11 chr2 19769784 19769871 -230917983 + MIR SINE MIR 167 253 -9 775 173 27 22 chr2 19769905 19770090 -230917764 + MER53 DNA DNA 4 189 0 344 107 77 18 chr2 19770719 19770888 -230916966 + (CA)n Simple_repeat Simple_repeat 1 179 0 * 469 67 62 56 chr2 19770847 19771026 -230916828 + (CACAC)n Simple_repeat Simple_repeat 1 180 0 204 109 65 0 chr2 19771029 19771075 -230916779 + (CA)n Simple_repeat Simple_repeat 2 50 0 407 226 46 111 chr2 19771222 19771439 -230916415 + L1MC5 LINE L1 7717 7919 -42 636 179 26 100 chr2 19771494 19771684 -230916170 + MER20 DNA MER1_type 1 176 -43 355 99 50 55 chr2 19771833 19772014 -230915840 + (CA)n Simple_repeat Simple_repeat 1 180 0 324 109 17 74 chr2 19772023 19772198 -230915656 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 366 96 61 17 chr2 19772229 19772344 -230915510 + (CA)n Simple_repeat Simple_repeat 2 121 0 508 142 59 6 chr2 19772362 19772531 -230915323 + (CA)n Simple_repeat Simple_repeat 1 178 0 360 0 0 0 chr2 19773212 19773252 -230914602 + (TG)n Simple_repeat Simple_repeat 2 41 0 987 170 13 0 chr2 19773296 19773449 -230914405 - FRAM SINE Alu -21 155 1 227 318 83 38 chr2 19775470 19775602 -230912252 - L2 LINE L2 -9 3263 3126 1125 263 104 51 chr2 19776086 19776647 -230911207 - MLT1G LTR MaLR -8 582 2 393 248 23 31 chr2 19777510 19777639 -230910215 + MER63 DNA MER1_type 933 1060 0 208 290 101 14 chr2 19777706 19777775 -230910079 - MIR SINE MIR -177 85 11 188 310 56 0 chr2 19777953 19778024 -230909830 - MIR SINE MIR -92 116 42 1020 220 0 0 chr2 19778247 19778456 -230909398 - MER3 DNA MER1_type 0 209 1 285 233 129 43 chr2 19779676 19779792 -230908062 + L2 LINE L2 3187 3312 -1 315 184 92 11 chr2 19781089 19781176 -230906678 - MER94 DNA DNA -14 120 27 396 133 27 27 chr2 19781181 19781256 -230906598 + L1MC5 LINE L1 7625 7699 -262 2150 118 7 7 chr2 19781269 19781573 -230906281 + AluSx SINE Alu 1 304 -8 1666 165 4 0 chr2 19781580 19781828 -230906026 + 7SLRNA srpRNA srpRNA 1 249 -71 879 132 6 12 chr2 19831898 19832065 -230855789 + (TTCC)n Simple_repeat Simple_repeat 4 169 0 3418 186 28 9 chr2 19832065 19832747 -230855107 - L1MC2 LINE L1 -8 6336 5642 596 183 67 0 chr2 19832747 19832867 -230854987 - L1MB2 LINE L1 -263 5908 5781 2602 199 97 6 chr2 19832896 19833790 -230854064 - L1MB2 LINE L1 -499 5672 4692 486 272 121 80 chr2 19833791 19833892 -230853962 - L1MB2 LINE L1 -2654 3492 3397 1691 167 0 29 chr2 19833892 19834203 -230853651 + AluJb SINE Alu 1 302 -10 486 272 121 80 chr2 19834203 19834560 -230853294 - L1MB2 LINE L1 -2749 3397 3001 718 171 8 0 chr2 19834651 19834768 -230853086 + FLAM_C SINE Alu 6 123 -20 226 267 23 12 chr2 19834871 19834957 -230852897 - L1MB2 LINE L1 -3328 2818 2732 2312 84 0 0 chr2 19836734 19837042 -230850812 + AluSg SINE Alu 1 308 -2 537 137 53 69 chr2 19837329 19837460 -230850394 + MER53 DNA DNA 1 129 -60 21 82 0 0 chr2 19837871 19837920 -230849934 + GC_rich Low_complexity Low_complexity 1 49 0 679 102 86 47 chr2 19838090 19838218 -230849636 - FLAM_C SINE Alu 0 133 1 206 191 0 176 chr2 19838942 19838975 -230848879 + L2 LINE L2 3240 3257 -56 2152 84 0 42 chr2 19838975 19839285 -230848569 + AluSx SINE Alu 1 297 -15 206 191 0 176 chr2 19839285 19839319 -230848535 + L2 LINE L2 3257 3295 -18 1805 180 0 7 chr2 19839535 19839840 -230848014 + AluJb SINE Alu 1 293 -19 2229 91 0 14 chr2 19840481 19840652 -230847202 - AluSx SINE Alu 0 304 137 2078 123 10 10 chr2 19840652 19840953 -230846901 - AluSp SINE Alu -12 301 1 2229 91 0 14 chr2 19840953 19841089 -230846765 - AluSx SINE Alu -167 137 1 348 296 171 22 chr2 19841570 19841773 -230846081 - MIR SINE MIR -32 230 12 360 150 17 0 chr2 19841814 19841874 -230845980 - U7 snRNA snRNA -2 61 1 481 211 49 28 chr2 19842147 19842289 -230845565 + L1ME3A LINE L1 5989 6133 -37 1745 164 27 0 chr2 19842387 19842686 -230845168 + AluJb SINE Alu 1 307 -5 2156 121 0 3 chr2 19843358 19843663 -230844191 + AluSg SINE Alu 1 304 -6 721 214 0 0 chr2 19843673 19843804 -230844050 + FLAM_C SINE Alu 1 131 -2 21 36 0 0 chr2 19845767 19845795 -230842059 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 19846550 19846575 -230841279 + AT_rich Low_complexity Low_complexity 1 25 0 343 256 173 15 chr2 19847467 19847600 -230840254 + L1ME LINE L1 5621 5774 -347 983 204 57 9 chr2 19847683 19847913 -230839941 + AluJb SINE Alu 62 302 -10 1219 135 163 28 chr2 19848320 19848602 -230839252 - MER2 DNA MER2_type -25 320 1 1571 184 15 0 chr2 19848700 19848967 -230838887 - AluJb SINE Alu -20 292 22 720 212 0 0 chr2 19848999 19849131 -230838723 - FLAM_C SINE Alu -1 132 1 1742 162 26 19 chr2 19849636 19849945 -230837909 - AluJb SINE Alu -1 311 1 26 0 0 0 chr2 19851725 19851751 -230836103 + AT_rich Low_complexity Low_complexity 1 26 0 2140 110 16 10 chr2 19852250 19852560 -230835294 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 19853262 19853283 -230834571 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 19853672 19853711 -230834143 + AT_rich Low_complexity Low_complexity 1 39 0 2876 16 0 0 chr2 19854137 19854453 -230833401 - AluYb8 SINE Alu -2 316 1 3945 186 32 33 chr2 19854778 19855743 -230832111 - L1MB4 LINE L1 -36 6144 5176 5130 147 101 64 chr2 19856407 19856595 -230831259 + Tigger3b DNA MER2_type 1 181 -2847 2367 96 0 10 chr2 19856595 19856909 -230830945 + AluSx SINE Alu 1 311 -1 5130 147 101 64 chr2 19856909 19857435 -230830419 + Tigger3b DNA MER2_type 181 686 -2342 930 188 0 0 chr2 19857435 19857584 -230830270 + FRAM SINE Alu 1 149 -17 5130 147 101 64 chr2 19857584 19858055 -230829799 + Tigger3b DNA MER2_type 686 1231 0 29 28 0 0 chr2 19859500 19859536 -230828318 + AT_rich Low_complexity Low_complexity 1 36 0 2465 87 0 0 chr2 19859543 19859853 -230828001 + AluSg SINE Alu 1 310 0 270 0 0 0 chr2 19859854 19859884 -230827970 + (TA)n Simple_repeat Simple_repeat 2 31 0 1557 95 9 18 chr2 19860530 19860751 -230827103 + AluSg/x SINE Alu 79 297 -15 1800 147 0 46 chr2 19861646 19861932 -230825922 + AluJb SINE Alu 1 272 -40 182 36 0 36 chr2 19861932 19861960 -230825894 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1800 147 0 46 chr2 19861960 19862000 -230825854 + AluJb SINE Alu 272 312 0 954 244 102 83 chr2 19862179 19862513 -230825341 + L1MC4 LINE L1 7520 7869 -173 2192 96 7 14 chr2 19862513 19862806 -230825048 - AluSx SINE Alu -15 297 7 954 244 102 83 chr2 19862806 19862979 -230824875 + L1MC4 LINE L1 7869 8037 -5 324 310 0 26 chr2 19863341 19863457 -230824397 + MER8 DNA MER2_type 27 139 -100 22 35 0 0 chr2 19863731 19863760 -230824094 + AT_rich Low_complexity Low_complexity 1 29 0 2001 138 0 20 chr2 19863824 19864129 -230823725 + AluSx SINE Alu 9 307 -5 341 279 106 0 chr2 19864420 19864524 -230823330 - MIR SINE MIR -78 184 70 34 0 0 0 chr2 19864666 19864700 -230823154 + AT_rich Low_complexity Low_complexity 1 34 0 2208 73 0 4 chr2 19864700 19864972 -230822882 - AluY SINE Alu -25 286 16 1899 158 0 7 chr2 19866799 19867091 -230820763 - AluSx SINE Alu -13 299 10 2074 109 7 0 chr2 19867365 19867641 -230820213 + AluSx SINE Alu 3 280 -32 375 78 0 0 chr2 19867642 19867693 -230820161 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 237 316 51 25 chr2 19867731 19867810 -230820044 + MIR SINE MIR 35 115 -147 1272 275 68 13 chr2 19867839 19868380 -230819474 - L1M4 LINE L1 -1166 4980 4410 232 271 132 23 chr2 19868676 19868805 -230819049 - MER20B DNA MER1_type -604 179 37 230 323 132 7 chr2 19869502 19869630 -230818224 + MIR SINE MIR 1 139 -69 1310 204 85 66 chr2 19870819 19871406 -230816448 + L1MC5 LINE L1 6975 7572 -389 23 0 0 0 chr2 19871451 19871474 -230816380 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr2 19873287 19873327 -230814527 + AT_rich Low_complexity Low_complexity 1 40 0 241 184 0 20 chr2 19873991 19874040 -230813814 + (CATA)n Simple_repeat Simple_repeat 3 50 0 847 203 35 25 chr2 19879575 19879777 -230808077 - MER105 DNA DNA 0 204 1 1378 182 8 8 chr2 19879868 19880104 -230807750 - AluJo SINE Alu -38 274 39 202 284 245 49 chr2 19880658 19880964 -230806890 + L2 LINE L2 2484 2849 -465 817 312 108 29 chr2 19881119 19881906 -230805948 - L2 LINE L2 0 3313 2412 590 241 64 35 chr2 19881993 19882366 -230805488 - L1M4 LINE L1 -2853 3293 2910 286 143 0 0 chr2 19882372 19882414 -230805440 + 5S rRNA rRNA 1 42 -79 561 171 48 0 chr2 19883112 19883217 -230804637 + FLAM_C SINE Alu 21 130 -13 294 317 108 52 chr2 19883253 19883502 -230804352 - L2 LINE L2 -815 2499 2237 1080 110 6 43 chr2 19884497 19884660 -230803194 + AluSg SINE Alu 1 157 -153 25 0 0 0 chr2 19886557 19886582 -230801272 + AT_rich Low_complexity Low_complexity 1 25 0 221 176 0 20 chr2 19887065 19887116 -230800738 + CT-rich Low_complexity Low_complexity 2 51 0 1665 122 12 8 chr2 19887858 19888105 -230799749 - AluSx SINE Alu -21 291 44 2114 93 18 4 chr2 19888135 19888445 -230799409 + AluSp SINE Alu 1 314 0 1960 148 20 3 chr2 19888915 19889218 -230798636 + AluSx SINE Alu 3 310 -2 632 161 31 19 chr2 19891241 19891402 -230796452 + Charlie5 DNA MER1_type 2423 2585 -27 2599 37 0 0 chr2 19891700 19891996 -230795858 + AluY SINE Alu 1 296 -15 364 203 40 3 chr2 19892402 19892526 -230795328 - AluJ/monomer SINE Alu -246 54 1 191 245 306 20 chr2 19893298 19893396 -230794458 + MIR SINE MIR 74 199 -63 241 378 99 13 chr2 19893569 19893720 -230794134 - L2 LINE L2 -55 3217 3054 243 139 0 0 chr2 19894066 19894073 -230793781 + (TAA)n Simple_repeat Simple_repeat 2 8 -36 1636 102 125 16 chr2 19894073 19894329 -230793525 + AluSg SINE Alu 1 284 -26 243 139 0 0 chr2 19894329 19894364 -230793490 + (TAA)n Simple_repeat Simple_repeat 7 44 0 2470 143 57 30 chr2 19894426 19894867 -230792987 + MER21A LTR ERV1 459 911 -20 1969 144 0 11 chr2 19894869 19895154 -230792700 + AluSx SINE Alu 1 282 -30 433 104 15 0 chr2 19895301 19895368 -230792486 - MER4E LTR ERV1 -5 761 694 * 1597 136 95 74 chr2 19895360 19895639 -230792215 - MER4B LTR ERV1 -235 375 85 2426 68 3 0 chr2 19895639 19895935 -230791919 - AluSp SINE Alu -16 297 1 1597 136 95 74 chr2 19895935 19896022 -230791832 - MER4B LTR ERV1 -525 85 1 3136 135 40 54 chr2 19896149 19896757 -230791097 + MER4A LTR ERV1 2 600 0 1765 155 35 7 chr2 19897081 19897365 -230790489 - AluJb SINE Alu -20 292 1 304 279 136 75 chr2 19897366 19897566 -230790288 - L1MC/D LINE L1 -297 5824 5638 561 215 15 39 chr2 19897566 19897696 -230790158 - FLAM_A SINE Alu -6 127 1 304 279 136 75 chr2 19897696 19897854 -230790000 - L1MC/D LINE L1 -483 5638 5449 25 31 0 0 chr2 19897854 19897886 -230789968 + AT_rich Low_complexity Low_complexity 1 32 0 237 276 31 10 chr2 19898393 19898491 -230789363 + MER72 LTR ERV1 377 476 -246 633 193 49 50 chr2 19898499 19898731 -230789123 + LTR45B LTR ERV1 302 525 0 409 147 53 13 chr2 19898798 19898873 -230788981 + AluJb SINE Alu 190 267 -45 370 276 55 8 chr2 19898948 19899075 -230788779 - L1MC/D LINE L1 -1526 4620 4488 864 245 117 11 chr2 19899879 19900144 -230787710 + MER58B DNA MER1_type 46 338 -3 655 233 89 30 chr2 19900160 19900430 -230787424 + MER33 DNA MER1_type 29 314 -10 1699 147 84 7 chr2 19900689 19900975 -230786879 + AluJb SINE Alu 1 308 -4 299 276 32 8 chr2 19901067 19901190 -230786664 + L1M4 LINE L1 3719 3844 -2302 399 300 120 42 chr2 19901250 19901425 -230786429 + L1M4 LINE L1 4360 4520 -1626 1682 140 57 4 chr2 19901425 19901729 -230786125 + AluJb SINE Alu 1 312 0 399 300 120 42 chr2 19901729 19901960 -230785894 + L1M4 LINE L1 4520 4798 -1348 1956 128 10 0 chr2 19902091 19902387 -230785467 - AluSx SINE Alu -7 305 7 2059 116 7 7 chr2 19902418 19902721 -230785133 + AluSx SINE Alu 1 303 -9 381 222 19 28 chr2 19902914 19903022 -230784832 + L1MD1 LINE L1 6079 6185 -57 219 315 137 0 chr2 19904668 19904741 -230783113 + MIR3 SINE MIR 85 167 -41 5452 70 14 3 chr2 19908054 19908787 -230779067 + L1P LINE L1 4490 5230 -916 1667 184 13 23 chr2 19909037 19909347 -230778507 + AluJb SINE Alu 1 307 -5 1650 173 11 11 chr2 19909347 19909625 -230778229 + AluJb SINE Alu 1 278 -34 215 30 0 30 chr2 19909640 19909673 -230778181 + (TAAAA)n Simple_repeat Simple_repeat 3 34 0 25 75 0 0 chr2 19909836 19909889 -230777965 + AT_rich Low_complexity Low_complexity 1 53 0 590 177 16 32 chr2 19910544 19910668 -230777186 - FLAM_C SINE Alu -2 141 20 255 364 66 13 chr2 19910668 19910819 -230777035 - L2 LINE L2 -239 3033 2875 855 184 0 0 chr2 19911165 19911306 -230776548 + AluJb SINE Alu 1 141 -171 228 130 0 0 chr2 19911323 19911369 -230776485 + (A)n Simple_repeat Simple_repeat 1 46 0 22 56 0 0 chr2 19911983 19912019 -230775835 + AT_rich Low_complexity Low_complexity 1 36 0 1273 165 89 58 chr2 19912112 19912237 -230775617 + AluJo SINE Alu 1 121 -191 1980 138 7 0 chr2 19912237 19912534 -230775320 + AluSx SINE Alu 1 299 -13 1273 165 89 58 chr2 19912534 19912699 -230775155 + AluJo SINE Alu 121 300 -12 3980 122 51 7 chr2 19913031 19913703 -230774151 - L1PA15 LINE L1 0 6165 5465 727 171 47 0 chr2 19913806 19913935 -230773919 + AluJo SINE Alu 1 135 -177 2002 100 62 0 chr2 19915472 19915761 -230772093 + AluSg1 SINE Alu 1 307 -2 34 84 0 0 chr2 19916021 19916104 -230771750 + AT_rich Low_complexity Low_complexity 1 83 0 1195 95 6 0 chr2 19916641 19916799 -230771055 + AluSc SINE Alu 148 306 -3 498 254 51 0 chr2 19917623 19917741 -230770113 + MER94 DNA DNA 11 134 0 1068 154 24 107 chr2 19917797 19918050 -230769804 + AluJo SINE Alu 5 236 -76 1455 193 0 0 chr2 19918052 19918317 -230769537 + AluJo SINE Alu 46 310 -2 394 176 49 40 chr2 19918535 19918653 -230769201 + MIR SINE MIR 41 158 -50 2318 106 0 0 chr2 19918653 19918955 -230768899 + AluY SINE Alu 1 302 -9 193 372 0 43 chr2 19919218 19919312 -230768542 - MIR3 SINE MIR -110 98 9 270 0 0 0 chr2 19919395 19919425 -230768429 + (A)n Simple_repeat Simple_repeat 1 30 0 183 279 82 0 chr2 19919697 19919758 -230768096 - MIR SINE MIR -108 100 35 24 0 0 0 chr2 19920985 19921009 -230766845 + AT_rich Low_complexity Low_complexity 1 24 0 2441 70 0 0 chr2 19921108 19921407 -230766447 - AluY SINE Alu -12 299 1 1645 263 86 54 chr2 19923088 19923539 -230764315 + L1ME LINE L1 92 527 -5543 1918 148 24 7 chr2 19923539 19923837 -230764017 + AluSx SINE Alu 1 303 -9 1645 263 86 54 chr2 19923837 19924294 -230763560 + L1ME LINE L1 527 1029 -5041 236 215 0 46 chr2 19924308 19924373 -230763481 - MER65C LTR ERV1 -7 454 393 1934 154 3 10 chr2 19924380 19924679 -230763175 + AluJb SINE Alu 5 301 -11 1149 169 0 31 chr2 19924727 19924952 -230762902 + AluJb SINE Alu 95 312 0 1287 214 110 27 chr2 19924955 19925329 -230762525 - MER65C LTR ERV1 -56 405 1 670 275 74 30 chr2 19925329 19925736 -230762118 + L1ME LINE L1 1079 1503 -4758 2889 205 117 33 chr2 19925742 19926493 -230761361 + MER21B LTR ERV1 1 814 -49 332 123 70 0 chr2 19926540 19926597 -230761257 + MER21B-int LTR ERV1 2 62 -4129 1514 188 97 18 chr2 19926751 19927091 -230760763 + MER21B-int LTR ERV1 146 512 -3679 261 139 0 0 chr2 19927103 19927146 -230760708 + (A)n Simple_repeat Simple_repeat 1 43 0 1448 210 41 7 chr2 19927347 19927642 -230760212 - MER58B DNA MER1_type -36 305 1 360 0 0 0 chr2 19927769 19927809 -230760045 + (TG)n Simple_repeat Simple_repeat 2 41 0 1396 174 106 4 chr2 19928740 19929030 -230758824 + AluJo SINE Alu 3 319 0 720 179 0 0 chr2 19929117 19929229 -230758625 + AluJ SINE Alu 1 112 -200 2234 148 61 5 chr2 19929230 19929607 -230758247 + MSTA LTR MaLR 2 399 -29 1144 155 0 52 chr2 19929613 19929806 -230758048 + AluJ SINE Alu 107 289 -23 24 0 0 0 chr2 19929806 19929830 -230758024 + AT_rich Low_complexity Low_complexity 1 24 0 1608 150 92 7 chr2 19930438 19930711 -230757143 - AluJo SINE Alu -16 296 1 1773 171 16 13 chr2 19931664 19931974 -230755880 - AluJb SINE Alu -1 311 1 1534 149 12 90 chr2 19932004 19932168 -230755686 - AluJb SINE Alu -16 296 121 279 0 0 0 chr2 19932168 19932199 -230755655 + (TG)n Simple_repeat Simple_repeat 2 32 0 1534 149 12 90 chr2 19932199 19932235 -230755619 - AluJb SINE Alu -191 121 84 486 0 0 0 chr2 19932235 19932289 -230755565 + (TG)n Simple_repeat Simple_repeat 1 54 0 1534 149 12 90 chr2 19932289 19932408 -230755446 - AluJb SINE Alu -228 84 1 181 296 0 0 chr2 19933069 19933113 -230754741 - L2 LINE L2 -224 3048 3005 230 343 149 17 chr2 19933330 19933505 -230754349 - MIR SINE MIR 0 262 65 2295 97 0 3 chr2 19933606 19933904 -230753950 + AluSx SINE Alu 6 302 -10 21 36 0 0 chr2 19934540 19934568 -230753286 + AT_rich Low_complexity Low_complexity 1 28 0 424 269 84 8 chr2 19934726 19934845 -230753009 + FLAM_A SINE Alu 6 133 0 1991 128 3 47 chr2 19935084 19935404 -230752450 + AluSx SINE Alu 1 306 -6 370 259 45 53 chr2 19935602 19936004 -230751850 - Charlie2 DNA MER1_type -2215 567 2 314 227 49 119 chr2 19936005 19936190 -230751664 + MER5B DNA MER1_type 6 177 -1 324 271 36 2 chr2 19936292 19936434 -230751420 + MIR SINE MIR 37 205 -57 674 181 0 9 chr2 19936524 19936640 -230751214 + AluJ SINE Alu 3 117 -195 238 350 30 0 chr2 19936693 19936793 -230751061 + L1MC/D LINE L1 5614 5716 -2092 2159 122 3 0 chr2 19937334 19937645 -230750209 + AluSx SINE Alu 1 312 0 651 184 142 0 chr2 19938465 19938606 -230749248 - AluJo SINE Alu -31 281 121 819 203 0 0 chr2 19938720 19938863 -230748991 + AluJ SINE Alu 123 265 -47 306 98 78 0 chr2 19938863 19938914 -230748940 + AluJ SINE Alu 241 295 -7 23 54 0 0 chr2 19938919 19938956 -230748898 + AT_rich Low_complexity Low_complexity 1 37 0 1241 202 0 91 chr2 19939110 19939407 -230748447 + AluJb SINE Alu 5 274 -38 1601 165 0 0 chr2 19939535 19939825 -230748029 - AluJb SINE Alu 0 319 30 2334 87 0 3 chr2 19940187 19940499 -230747355 + AluY SINE Alu 1 311 0 1671 143 6 78 chr2 19940569 19940891 -230746963 - AluJo SINE Alu -9 303 5 2155 90 7 0 chr2 19941078 19941366 -230746488 + AluSq SINE Alu 1 290 -23 748 178 0 8 chr2 19943532 19943653 -230744201 + FLAM_C SINE Alu 6 127 -185 216 0 0 0 chr2 19943653 19943677 -230744177 + (TAA)n Simple_repeat Simple_repeat 1 24 0 1535 132 27 27 chr2 19944134 19944430 -230743424 + AluJb SINE Alu 1 296 -16 21 36 0 0 chr2 19945857 19945885 -230741969 + GC_rich Low_complexity Low_complexity 1 28 0 224 130 22 0 chr2 19946211 19946257 -230741597 + CT-rich Low_complexity Low_complexity 1 47 0 26 30 0 0 chr2 19946429 19946462 -230741392 + GC_rich Low_complexity Low_complexity 1 33 0 333 244 24 12 chr2 19947279 19947361 -230740493 + L2 LINE L2 3134 3216 -56 268 326 152 37 chr2 19947421 19947881 -230739973 + L2 LINE L2 2247 2759 -555 254 138 123 15 chr2 19948321 19948386 -230739468 + MLT1K LTR MaLR 513 584 -4 216 309 62 0 chr2 19948408 19948489 -230739365 - MIR SINE MIR -13 249 164 808 228 0 41 chr2 19948490 19948661 -230739193 + MER45A DNA AcHobo 1 164 -14 423 244 9 0 chr2 19948687 19948802 -230739052 + MER103 DNA DNA 49 164 -2 552 219 175 7 chr2 19949104 19949241 -230738613 + MER5A DNA MER1_type 29 188 -1 363 274 35 35 chr2 19949243 19949356 -230738498 + MLT1L LTR MaLR 151 263 -352 759 209 0 78 chr2 19949618 19949762 -230738092 - MER5B DNA MER1_type 0 178 51 2349 80 0 0 chr2 19949762 19950089 -230737765 + AluSq SINE Alu 1 313 0 759 209 0 78 chr2 19950089 19950135 -230737719 - MER5B DNA MER1_type -127 51 3 799 153 0 8 chr2 19950287 19950418 -230737436 + AluJo SINE Alu 5 134 -178 396 236 130 75 chr2 19950459 19950752 -230737102 - HAL1b LINE L1 -71 1277 969 405 0 0 0 chr2 19950752 19950797 -230737057 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 454 228 57 49 chr2 19950809 19950932 -230736922 - FRAM SINE Alu -49 127 4 396 213 132 114 chr2 19950934 19951055 -230736799 - HAL1b LINE L1 -365 983 866 2240 92 0 0 chr2 19951055 19951347 -230736507 + AluSg SINE Alu 2 293 -17 396 213 132 114 chr2 19951347 19951558 -230736296 - HAL1b LINE L1 -482 866 645 417 263 135 19 chr2 19951578 19951734 -230736120 - MLT1H LTR MaLR 0 549 376 790 215 134 11 chr2 19951782 19951968 -230735886 - MLT1H LTR MaLR -268 281 73 1642 173 10 13 chr2 19952034 19952347 -230735507 + AluJb SINE Alu 1 312 0 1368 150 120 15 chr2 19952438 19952704 -230735150 + AluJo SINE Alu 1 294 -18 362 192 77 13 chr2 19952716 19952794 -230735060 + LTR50 LTR ERVL 85 167 -628 962 90 0 0 chr2 19952840 19952973 -230734881 + AluSp SINE Alu 1 133 -180 315 111 25 12 chr2 19952978 19953059 -230734795 + (TA)n Simple_repeat Simple_repeat 2 83 0 1212 109 29 0 chr2 19953059 19953233 -230734621 + AluSp SINE Alu 123 301 -12 1256 237 139 31 chr2 19953314 19953766 -230734088 + LTR50 LTR ERVL 295 795 0 578 150 63 8 chr2 19953951 19954078 -230733776 - L1MB8 LINE L1 -1 6177 6044 265 235 0 0 chr2 19954106 19954157 -230733697 - MER66A LTR ERV1 -138 340 290 2249 75 3 38 chr2 19954182 19954501 -230733353 - AluY SINE Alu -3 308 1 1409 197 68 4 chr2 19954502 19954781 -230733073 - AluJb SINE Alu -5 297 1 923 204 5 16 chr2 19954783 19954974 -230732880 - L1MB8 LINE L1 -126 6052 5864 834 144 0 27 chr2 19954974 19955120 -230732734 - FLAM_C SINE Alu 0 143 2 1190 154 18 14 chr2 19955123 19955344 -230732510 - L1MB8 LINE L1 -306 5878 5657 1883 127 0 7 chr2 19955717 19956000 -230731854 + AluJb SINE Alu 1 281 -31 2031 136 10 0 chr2 19956387 19956689 -230731165 + AluSq SINE Alu 1 305 -8 1836 136 121 82 chr2 19957018 19957051 -230730803 - MSTA LTR MaLR -8 420 390 2037 128 3 6 chr2 19957051 19957363 -230730491 + AluSx SINE Alu 1 311 -1 1836 136 121 82 chr2 19957363 19957733 -230730121 - MSTA LTR MaLR -38 390 1 2264 112 0 0 chr2 19957917 19958229 -230729625 + AluSx SINE Alu 1 312 0 813 157 0 22 chr2 19958437 19958571 -230729283 + FLAM_A SINE Alu 1 131 -2 720 133 92 0 chr2 19958730 19958850 -230729004 + FLAM_C SINE Alu 3 133 0 2138 99 14 0 chr2 19959408 19959700 -230728154 + AluSx SINE Alu 1 296 -16 2022 135 0 7 chr2 19959721 19960024 -230727830 + AluJb SINE Alu 1 301 -11 1515 217 0 0 chr2 19960404 19960685 -230727169 + AluJb SINE Alu 1 281 -31 273 29 0 0 chr2 19960690 19960724 -230727130 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1642 262 91 16 chr2 19961027 19961857 -230725997 + L2 LINE L2 2413 3300 -13 754 146 7 44 chr2 19961859 19961996 -230725858 + FLAM_C SINE Alu 1 132 -1 228 384 0 0 chr2 19962488 19962561 -230725293 - L2 LINE L2 -1 3271 3199 2256 143 14 8 chr2 19962603 19962974 -230724880 - THE1C LTR MaLR 0 375 3 5717 118 1 5 chr2 19962976 19963761 -230724093 - THE1C-int LTR MaLR 0 1580 799 23 68 0 0 chr2 19963786 19963830 -230724024 + AT_rich Low_complexity Low_complexity 1 44 0 1320 229 93 45 chr2 19963837 19964118 -230723736 + LTR29 LTR ERV1 162 473 -149 1561 169 7 49 chr2 19964118 19964426 -230723428 + AluJb SINE Alu 1 295 -17 1320 229 93 45 chr2 19964426 19964584 -230723270 + LTR29 LTR ERV1 473 622 0 1860 150 54 10 chr2 19964586 19964899 -230722955 + LTR29-int LTR ERV1 1 327 -6004 611 235 26 20 chr2 19964932 19965085 -230722769 - MER74A LTR ERVL -404 154 1 232 143 125 71 chr2 19965161 19965217 -230722637 + MLT1H LTR MaLR 265 323 -226 229 173 13 147 chr2 19965293 19965368 -230722486 + MLT1H LTR MaLR 485 549 0 2280 134 41 6 chr2 19965430 19965795 -230722059 - MER41D LTR ERV1 -179 378 1 354 122 0 0 chr2 19966002 19966051 -230721803 - MER63 DNA MER1_type -35 1025 977 522 161 0 0 chr2 19966052 19966133 -230721721 - MER63 DNA MER1_type -311 751 671 192 77 0 0 chr2 19966134 19966160 -230721694 + (T)n Simple_repeat Simple_repeat 1 26 0 2067 96 11 0 chr2 19966181 19966462 -230721392 + AluSx SINE Alu 16 299 -13 730 215 0 13 chr2 19966465 19966614 -230721240 + MER6B DNA MER2_type 1 147 -63 418 133 13 53 chr2 19966642 19966717 -230721137 + MER6 DNA MER2_type 794 865 0 248 341 32 51 chr2 19966837 19967054 -230720800 + MLT1K LTR MaLR 183 395 -193 206 324 0 0 chr2 19967068 19967139 -230720715 + GA-rich Low_complexity Low_complexity 2 72 0 * 211 256 0 0 chr2 19967103 19967142 -230720712 + polypurine Low_complexity Low_complexity 1 39 0 2380 162 19 32 chr2 19967201 19967633 -230720221 - MSTB LTR MaLR 0 426 1 312 148 16 33 chr2 19967653 19967714 -230720140 + MLT1K LTR MaLR 529 588 0 2195 105 0 0 chr2 19967977 19968271 -230719583 + AluSx SINE Alu 6 299 -13 1080 204 180 0 chr2 19968713 19968831 -230719023 + AluJb SINE Alu 1 96 -206 306 0 0 0 chr2 19968831 19968865 -230718989 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1080 204 180 0 chr2 19968865 19968996 -230718858 + AluJb SINE Alu 96 295 -7 1692 107 0 0 chr2 19969115 19969403 -230718451 - AluSg SINE Alu 0 336 49 786 168 0 15 chr2 19969488 19969625 -230718229 + AluJo SINE Alu 2 136 -176 23 0 0 0 chr2 19969771 19969794 -230718060 + AT_rich Low_complexity Low_complexity 1 23 0 1745 144 0 54 chr2 19969850 19970163 -230717691 + AluSx SINE Alu 9 304 -8 220 205 36 36 chr2 19970207 19970290 -230717564 + A-rich Low_complexity Low_complexity 2 84 0 3420 132 71 91 chr2 19971202 19971961 -230715893 - Ricksha DNA DNA 0 3246 2503 955 176 24 0 chr2 19971961 19972131 -230715723 + FAM SINE Alu 1 174 -11 3957 134 41 24 chr2 19972133 19972421 -230715433 - Ricksha DNA DNA -735 2511 2230 1209 172 119 32 chr2 19972421 19972706 -230715148 + AluYa5 SINE Alu 1 310 -1 3957 134 41 24 chr2 19972706 19972746 -230715108 - Ricksha DNA DNA -1016 2230 2192 2013 121 20 0 chr2 19972746 19973044 -230714810 - AluSx SINE Alu -8 304 1 3957 134 41 24 chr2 19973044 19973393 -230714461 - Ricksha DNA DNA -1054 2192 1821 1046 210 73 4 chr2 19973391 19973624 -230714230 - Ricksha DNA DNA -2957 289 41 * 1065 277 45 3 chr2 19973647 19973957 -230713897 - LTR16A LTR ERVL -17 433 111 307 361 57 10 chr2 19974092 19974286 -230713568 - L2 LINE L2 -926 2388 2186 297 148 37 0 chr2 19974599 19974680 -230713174 + CT-rich Low_complexity Low_complexity 2 85 0 6218 73 8 16 chr2 19975098 19975783 -230712071 - L1PA10 LINE L1 0 6168 5489 2049 116 3 3 chr2 19975783 19976084 -230711770 - AluSx SINE Alu -11 301 1 6218 73 8 16 chr2 19976084 19976238 -230711616 - L1PA10 LINE L1 -679 5489 5335 598 227 37 12 chr2 19976636 19976799 -230711055 - L1M4 LINE L1 -1185 5459 5293 1502 243 26 31 chr2 19976805 19977188 -230710666 - L1M4 LINE L1 -5672 870 490 1361 228 99 50 chr2 19977198 19977497 -230710357 - L1M4 LINE L1 -6119 423 97 784 203 0 0 chr2 19977497 19977630 -230710224 + FLAM_C SINE Alu 1 133 0 1361 228 99 50 chr2 19977630 19977733 -230710121 - L1M4 LINE L1 -6445 97 1 2116 112 0 0 chr2 19977769 19978063 -230709791 - AluSg SINE Alu -16 294 1 357 167 0 0 chr2 19978063 19978123 -230709731 + MER69 DNA AcHobo 2467 2526 0 1406 205 35 35 chr2 19978408 19978749 -230709105 + MER58B DNA MER1_type 1 341 0 282 319 25 4 chr2 19979108 19979298 -230708556 + HERVR LTR ERV1 3950 4206 -3019 28 86 0 0 chr2 19979307 19979377 -230708477 + AT_rich Low_complexity Low_complexity 1 70 0 1754 130 48 0 chr2 19979558 19979850 -230708004 - AluSx SINE Alu 0 305 1 830 103 0 9 chr2 19980285 19980401 -230707453 + FLAM_C SINE Alu 3 117 -26 857 195 0 65 chr2 19980790 19980990 -230706864 - AluJ SINE Alu -14 298 112 498 222 94 0 chr2 19981329 19981446 -230706408 - MER58B DNA MER1_type 0 341 214 662 178 0 0 chr2 19981462 19981569 -230706285 - AluJ SINE Alu -203 109 3 2185 117 0 0 chr2 19982573 19982881 -230704973 - AluSx SINE Alu -4 308 1 195 296 110 19 chr2 19983203 19983343 -230704511 - MIR SINE MIR -63 145 22 226 193 72 84 chr2 19983844 19983927 -230703927 + MIR SINE MIR 110 191 -71 269 229 0 16 chr2 19984174 19984235 -230703619 - MER58A DNA MER1_type 0 224 165 1558 221 52 27 chr2 19984235 19984638 -230703216 - LTR47B LTR ERVL 0 443 31 1478 136 23 125 chr2 19984649 19985002 -230702852 - AluYb8 SINE Alu -1 317 1 819 198 76 0 chr2 19985042 19985199 -230702655 - MER58A DNA MER1_type -55 169 1 1005 127 19 0 chr2 19985809 19985966 -230701888 - AluSg/x SINE Alu -27 285 126 235 225 191 0 chr2 19988590 19988679 -230699175 - MLT1I LTR MaLR -26 383 278 324 295 54 39 chr2 19988843 19988972 -230698882 - MLT1I LTR MaLR -266 143 13 2275 92 0 6 chr2 19988979 19989293 -230698561 + AluSx SINE Alu 1 312 0 31 26 0 0 chr2 19990396 19990434 -230697420 + AT_rich Low_complexity Low_complexity 1 38 0 821 128 8 0 chr2 19990434 19990551 -230697303 - FLAM_C SINE Alu -15 118 1 1238 135 0 0 chr2 19991137 19991307 -230696547 + AluSx SINE Alu 2 171 -141 582 153 0 10 chr2 19992810 19992908 -230694946 - Tigger7 DNA MER2_type -1 2490 2394 1209 207 4 0 chr2 19992909 19993136 -230694718 - Tigger7 DNA MER2_type -2222 265 38 2530 243 59 22 chr2 19993621 19994333 -230693521 - MER21B LTR ERV1 -124 739 2 1720 142 12 12 chr2 19995402 19995656 -230692198 + AluSx SINE Alu 37 290 -22 279 183 28 70 chr2 19995657 19995728 -230692126 + MLT1I LTR MaLR 270 337 -72 1808 229 103 52 chr2 19995879 19996217 -230691637 + MER21B LTR ERV1 143 462 -401 768 197 0 0 chr2 19996217 19996339 -230691515 + FLAM_A SINE Alu 1 122 -11 1808 229 103 52 chr2 19996339 19996620 -230691234 + MER21B LTR ERV1 462 794 -69 317 113 75 0 chr2 19996654 19996707 -230691147 + MLT1I LTR MaLR 335 391 -18 685 80 0 0 chr2 19997123 19997211 -230690643 - 5S rRNA rRNA -33 88 1 2180 85 3 14 chr2 19997307 19997601 -230690253 - AluSc SINE Alu 0 309 19 814 142 63 0 chr2 19997641 19997768 -230690086 + FLAM_C SINE Alu 1 135 -8 2056 139 13 3 chr2 19998235 19998536 -230689318 + AluSx SINE Alu 4 307 -5 1529 126 0 0 chr2 19998693 19998916 -230688938 - L1PA14 LINE L1 -10 6151 5929 1596 225 16 31 chr2 19999346 19999733 -230688121 - MER57B LTR ERV1 -1 433 53 2500 101 0 0 chr2 19999738 20000045 -230687809 + AluSx SINE Alu 1 307 -5 2082 135 99 6 chr2 20000081 20000414 -230687440 - THE1B LTR MaLR 0 364 1 637 224 0 0 chr2 20000456 20000600 -230687254 + FLAM_A SINE Alu 1 144 0 2394 93 3 10 chr2 20001890 20002223 -230685631 - AluSx SINE Alu 0 331 1 284 120 20 0 chr2 20002421 20002471 -230685383 + CT-rich Low_complexity Low_complexity 3 53 0 757 220 8 0 chr2 20002471 20002603 -230685251 - FLAM_A SINE Alu 0 133 1 916 327 40 43 chr2 20002708 20003333 -230684521 - MER57-int LTR ERV1 -1338 6199 5573 2336 110 0 0 chr2 20003333 20003633 -230684221 - AluSc SINE Alu -9 300 1 916 327 40 43 chr2 20003633 20003865 -230683989 - MER57-int LTR ERV1 -1964 5573 2174 561 151 0 0 chr2 20003896 20003982 -230683872 + FAM SINE Alu 88 173 -12 376 221 0 0 chr2 20003983 20004069 -230683785 - L1 LINE L1 -3368 3799 3714 * 12017 181 23 36 chr2 20004056 20007357 -230680497 - L1 LINE L1 -3709 3458 195 2487 51 34 0 chr2 20007357 20007651 -230680203 - AluY SINE Alu -7 304 1 12017 181 23 36 chr2 20007651 20007832 -230680022 - L1 LINE L1 -6972 195 13 12547 116 77 27 chr2 20008219 20009355 -230678499 - L1PBa LINE L1 -3430 3432 2354 2217 128 3 3 chr2 20009355 20009653 -230678201 - AluSq SINE Alu -15 298 1 12547 116 77 27 chr2 20009653 20010670 -230677184 - L1PBa LINE L1 -4508 2354 1116 2334 48 0 0 chr2 20010670 20010943 -230676911 - AluY SINE Alu -4 307 35 12547 116 77 27 chr2 20010943 20011467 -230676387 - L1PBa LINE L1 -5746 1116 620 824 194 100 0 chr2 20011447 20011627 -230676227 - L1PBa LINE L1 -6663 200 3 * 21 0 0 0 chr2 20013066 20013087 -230674767 + AT_rich Low_complexity Low_complexity 1 21 0 2211 107 3 19 chr2 20013087 20013397 -230674457 + AluSp SINE Alu 1 305 -8 861 156 0 0 chr2 20013430 20013552 -230674302 - AluJ SINE Alu -23 289 168 2181 71 21 7 chr2 20013821 20014124 -230673730 - AluSq SINE Alu 0 307 1 2343 91 3 0 chr2 20014264 20014560 -230673294 - AluSp SINE Alu -16 297 1 356 250 0 0 chr2 20014676 20014756 -230673098 - MER96 DNA MER1_type? 0 175 96 186 314 127 34 chr2 20014804 20014922 -230672932 + MIR SINE MIR 119 247 -15 454 198 20 20 chr2 20015078 20015179 -230672675 + MER5B DNA MER1_type 4 104 -74 22 35 0 0 chr2 20016528 20016557 -230671297 + AT_rich Low_complexity Low_complexity 1 29 0 1210 160 0 11 chr2 20017008 20017189 -230670665 - AluJ SINE Alu -133 179 1 718 278 71 31 chr2 20017584 20017839 -230670015 - MER57B-int LTR ERV1 -7270 267 3 1474 205 79 70 chr2 20017843 20018273 -230669581 - MER57B LTR ERV1 0 434 1 2158 92 3 14 chr2 20019460 20019754 -230668100 + AluSx SINE Alu 1 291 -21 2301 115 3 0 chr2 20020009 20020305 -230667549 - AluSp SINE Alu -16 297 1 197 171 12 37 chr2 20020838 20020920 -230666934 + CT-rich Low_complexity Low_complexity 2 81 0 378 215 131 8 chr2 20022068 20022198 -230665656 - LTR50 LTR ERVL -577 218 73 473 288 122 40 chr2 20022257 20022535 -230665319 + L2 LINE L2 2962 3262 -10 822 258 190 5 chr2 20022663 20022884 -230664970 - MIR SINE MIR 0 262 1 372 185 97 18 chr2 20023337 20023470 -230664384 - MIR SINE MIR -62 146 11 275 126 18 189 chr2 20024334 20024445 -230663409 + MER53 DNA DNA 3 94 -95 * 305 202 48 0 chr2 20024374 20024458 -230663396 - MER53 DNA DNA -8 181 94 261 0 0 0 chr2 20024742 20024771 -230663083 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1218 201 81 116 chr2 20024774 20024912 -230662942 + MLT2B1 LTR ERVL 2 143 -377 1486 164 9 4 chr2 20024912 20025143 -230662711 - AluSx SINE Alu -80 232 1 1218 201 81 116 chr2 20025143 20025461 -230662393 + MLT2B1 LTR ERVL 143 442 -78 1721 168 25 11 chr2 20025504 20025784 -230662070 - AluJb SINE Alu -22 290 7 384 22 0 0 chr2 20025814 20025859 -230661995 + (CA)n Simple_repeat Simple_repeat 2 46 0 642 207 21 14 chr2 20025897 20026037 -230661817 + MER5A DNA MER1_type 39 179 -10 1993 122 72 31 chr2 20026294 20026654 -230661200 + THE1C LTR MaLR 1 375 0 261 290 70 30 chr2 20026814 20026914 -230660940 + MIR SINE MIR 48 151 -57 914 310 28 5 chr2 20027086 20027509 -230660345 + ERVL LTR ERVL 3116 3548 -2216 247 210 0 16 chr2 20027710 20027772 -230660082 + (TTCA)n Simple_repeat Simple_repeat 4 64 0 200 236 179 80 chr2 20027857 20027886 -230659968 + L2 LINE L2 1657 1682 -1632 1840 157 0 46 chr2 20027886 20028191 -230659663 + AluJo SINE Alu 1 291 -21 200 236 179 80 chr2 20028191 20028373 -230659481 + L2 LINE L2 1682 1889 -1425 495 347 99 39 chr2 20028395 20028567 -230659287 + L2 LINE L2 2554 2714 -558 2060 158 45 21 chr2 20028567 20028948 -230658906 - MLT1B LTR MaLR 0 390 1 495 347 99 39 chr2 20028948 20029256 -230658598 + L2 LINE L2 2714 3054 -218 298 313 12 0 chr2 20029294 20029377 -230658477 + L2 LINE L2 3226 3309 -4 707 252 88 35 chr2 20029577 20029958 -230657896 + MLT1H LTR MaLR 3 389 -166 311 308 109 14 chr2 20030525 20030746 -230657108 + L1ME3A LINE L1 5707 5948 -222 1937 161 7 0 chr2 20031547 20031852 -230656002 + AluJo SINE Alu 1 307 -5 339 319 35 18 chr2 20031972 20032085 -230655769 + MIR SINE MIR 40 154 -108 39 22 0 0 chr2 20032765 20032811 -230655043 + AT_rich Low_complexity Low_complexity 1 46 0 574 225 125 12 chr2 20032928 20033088 -230654766 - MER5A DNA MER1_type -2 187 10 289 122 65 9 chr2 20033370 20033477 -230654377 + (CA)n Simple_repeat Simple_repeat 2 114 0 1884 148 27 20 chr2 20033627 20033925 -230653929 - AluJb SINE Alu -12 300 1 273 232 161 18 chr2 20033928 20034040 -230653814 + L2 LINE L2 2623 2750 -564 1124 164 86 33 chr2 20034107 20034351 -230653503 + MER68 LTR ERV1 3 259 -303 249 33 0 0 chr2 20034371 20034401 -230653453 + (GA)n Simple_repeat Simple_repeat 2 31 0 2249 107 0 0 chr2 20034416 20034705 -230653149 - AluSc SINE Alu -20 289 1 1988 170 61 15 chr2 20034705 20035100 -230652754 - MLT2C2 LTR ERVL -49 415 3 2376 95 0 3 chr2 20035102 20035408 -230652446 + AluSx SINE Alu 2 306 -6 1192 194 54 67 chr2 20035418 20035732 -230652122 + MER68 LTR ERV1 249 558 -4 180 312 104 13 chr2 20035818 20035895 -230651959 + L2 LINE L2 2937 3020 -252 445 199 176 0 chr2 20035895 20036026 -230651828 - MLT1G1 LTR MaLR 0 555 402 502 322 7 7 chr2 20036061 20036213 -230651641 - MLT1G1 LTR MaLR -220 375 224 206 185 93 19 chr2 20036525 20036579 -230651275 + L2 LINE L2 3151 3208 -64 2859 135 71 29 chr2 20036883 20037403 -230650451 + L1PB4 LINE L1 5613 6154 -2 209 161 0 0 chr2 20038250 20038281 -230649573 + polypyrimidine Low_complexity Low_complexity 2 32 0 774 160 0 8 chr2 20038303 20038422 -230649432 - FLAM_C SINE Alu -15 118 1 406 264 96 2 chr2 20038568 20038688 -230649166 - MIR SINE MIR -60 148 28 1814 163 57 0 chr2 20039064 20039230 -230648624 - AluJo SINE Alu -12 300 110 306 0 0 0 chr2 20039230 20039264 -230648590 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 1814 163 57 0 chr2 20039264 20039380 -230648474 - AluJo SINE Alu -202 110 2 231 318 0 0 chr2 20039387 20039453 -230648401 + L2 LINE L2 2980 3045 -227 1349 184 33 45 chr2 20040081 20040164 -230647690 - Charlie5 DNA MER1_type 0 2624 2541 2101 159 0 10 chr2 20040164 20040478 -230647376 + AluSx SINE Alu 1 311 -1 1349 184 33 45 chr2 20040478 20040790 -230647064 - Charlie5 DNA MER1_type -83 2541 2234 579 160 0 9 chr2 20040793 20040899 -230646955 - Charlie5 DNA MER1_type -2497 115 11 2501 68 0 3 chr2 20041258 20041568 -230646286 - AluY SINE Alu -2 309 1 2905 3 0 0 chr2 20041656 20041961 -230645893 - AluY SINE Alu -5 306 2 22 0 0 0 chr2 20042373 20042395 -230645459 + AT_rich Low_complexity Low_complexity 1 22 0 198 103 0 0 chr2 20042424 20042453 -230645401 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1964 142 7 0 chr2 20042721 20043023 -230644831 + AluSx SINE Alu 1 304 0 26 0 0 0 chr2 20043677 20043703 -230644151 + GC_rich Low_complexity Low_complexity 1 26 0 1548 175 15 58 chr2 20043954 20044280 -230643574 - AluJo SINE Alu 0 312 1 274 256 122 0 chr2 20044373 20044455 -230643399 - L2 LINE L2 -13 3259 3168 207 69 0 0 chr2 20044463 20044492 -230643362 + (CAGAGA)n Simple_repeat Simple_repeat 5 33 0 361 172 42 81 chr2 20045014 20045387 -230642467 + (TATTG)n Simple_repeat Simple_repeat 1 358 0 245 51 26 0 chr2 20045761 20045800 -230642054 + (TG)n Simple_repeat Simple_repeat 2 41 0 24 32 0 0 chr2 20046459 20046490 -230641364 + GC_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 20047725 20047754 -230640100 + AT_rich Low_complexity Low_complexity 1 29 0 1007 189 22 0 chr2 20050567 20050747 -230637107 - MER5A DNA MER1_type -5 184 1 1754 161 34 10 chr2 20050981 20051272 -230636582 - AluJo SINE Alu -10 302 5 362 271 50 122 chr2 20051333 20051636 -230636218 - L2 LINE L2 -28 3244 2964 299 322 11 11 chr2 20052195 20052285 -230635569 - L2 LINE L2 -36 3236 3147 323 187 40 13 chr2 20052317 20052392 -230635462 - MLT1F LTR MaLR -465 77 1 543 194 121 0 chr2 20052394 20052518 -230635336 - MIR SINE MIR -91 171 33 266 321 166 25 chr2 20052565 20052842 -230635012 - L2 LINE L2 -629 2685 2370 1556 180 20 27 chr2 20053357 20053652 -230634202 + AluJo SINE Alu 8 300 -12 1811 164 0 30 chr2 20053698 20053996 -230633858 - AluJb SINE Alu -23 289 1 389 289 33 16 chr2 20054595 20054716 -230633138 + L2 LINE L2 3191 3313 0 1997 130 23 23 chr2 20054870 20055169 -230632685 + AluSx SINE Alu 1 299 -13 452 165 11 0 chr2 20055181 20055272 -230632582 + GA-rich Low_complexity Low_complexity 2 93 0 1390 148 28 5 chr2 20056633 20056849 -230631005 - AluJo SINE Alu -7 305 85 344 306 126 28 chr2 20056888 20057095 -230630759 + MIR3 SINE MIR 3 256 -6 280 281 117 39 chr2 20057188 20057316 -230630538 + L2 LINE L2 3168 3305 -8 873 158 0 0 chr2 20057344 20057477 -230630377 + AluJb SINE Alu 1 133 -179 31086 107 7 57 chr2 20057486 20063967 -230623887 + L1PA7 LINE L1 5 6154 0 195 129 0 0 chr2 20064027 20064058 -230623796 + (A)n Simple_repeat Simple_repeat 1 31 0 239 341 41 32 chr2 20064149 20064272 -230623582 + MER5A DNA MER1_type 63 186 -3 1003 183 0 50 chr2 20064531 20064733 -230623121 + AluJb SINE Alu 120 311 -1 2814 7 0 0 chr2 20066101 20066399 -230621455 + AluYa5 SINE Alu 1 298 -13 252 316 94 41 chr2 20067404 20067575 -230620279 + L2 LINE L2 3006 3185 -87 482 313 71 30 chr2 20067619 20067887 -230619967 + L3 LINE CR1 1275 1553 -24 374 273 74 8 chr2 20068136 20068257 -230619597 + L2 LINE L2 3184 3312 -1 384 293 78 0 chr2 20068466 20068582 -230619272 + L2 LINE L2 3184 3308 -5 637 213 8 0 chr2 20068745 20068872 -230618982 + MER45A DNA AcHobo 51 178 0 2176 119 18 49 chr2 20069386 20069773 -230618081 - THE1C LTR MaLR 0 375 1 2271 159 83 8 chr2 20070079 20070475 -230617379 - MSTB LTR MaLR 0 426 1 532 272 77 18 chr2 20070892 20071061 -230616793 - MIR3 SINE MIR -11 197 19 192 361 12 0 chr2 20071215 20071298 -230616556 - L2 LINE L2 -1 3271 3188 185 361 0 14 chr2 20071341 20071413 -230616441 - L3 LINE CR1 -62 1515 1445 205 330 177 7 chr2 20071573 20071692 -230616162 - MIR SINE MIR -1 207 70 274 321 128 24 chr2 20072233 20072482 -230615372 - L3 LINE CR1 -3 1574 1300 2227 103 14 3 chr2 20072862 20073153 -230614701 - AluSx SINE Alu -18 294 1 241 282 13 0 chr2 20073985 20074063 -230613791 + (TG)n Simple_repeat Simple_repeat 1 79 0 248 271 0 0 chr2 20075055 20075114 -230612740 + L2 LINE L2 3248 3306 -7 2270 137 98 3 chr2 20075117 20075503 -230612351 - MSTA LTR MaLR -2 426 4 234 263 92 99 chr2 20075775 20075927 -230611927 - MIR SINE MIR -56 206 56 245 280 9 103 chr2 20076699 20076748 -230611106 - MIR SINE MIR -70 192 156 2164 113 3 0 chr2 20076748 20077075 -230610779 - AluSq SINE Alu 0 328 1 245 280 9 103 chr2 20077075 20077131 -230610723 - MIR SINE MIR -106 156 96 1903 251 48 13 chr2 20077131 20077514 -230610340 + MER90 LTR ERV1 1 410 -165 2806 82 3 3 chr2 20077514 20077869 -230609985 + THE1A LTR MaLR 1 355 0 1903 251 48 13 chr2 20077869 20078032 -230609822 + MER90 LTR ERV1 410 566 -9 251 208 39 104 chr2 20078041 20078118 -230609736 - MIR SINE MIR -163 99 28 580 235 87 11 chr2 20078806 20078986 -230608868 - MIR SINE MIR -60 202 6 216 0 0 0 chr2 20079110 20079134 -230608720 + (CTG)n Simple_repeat Simple_repeat 1 24 0 1002 244 85 3 chr2 20079134 20079441 -230608413 + LTR16A LTR ERVL 119 450 0 2366 89 20 0 chr2 20079706 20080009 -230607845 + AluSc SINE Alu 1 309 0 832 73 9 0 chr2 20080023 20080132 -230607722 + HY1 scRNA scRNA 2 111 -1 278 318 65 9 chr2 20080319 20080426 -230607428 - L2 LINE L2 -18 3254 3142 788 185 99 0 chr2 20080505 20080667 -230607187 + AluJo SINE Alu 120 297 -15 2277 104 0 16 chr2 20080669 20080998 -230606856 + AluSq SINE Alu 1 313 0 251 318 65 26 chr2 20081454 20081608 -230606246 + L2 LINE L2 2924 3083 -189 207 0 0 0 chr2 20082030 20082053 -230605801 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1928 146 30 7 chr2 20082177 20082478 -230605376 - AluSx SINE Alu -4 308 1 208 284 14 0 chr2 20082517 20082591 -230605263 + (TG)n Simple_repeat Simple_repeat 2 76 0 196 265 0 0 chr2 20083208 20083257 -230604597 - MIR SINE MIR -65 143 95 1616 188 34 28 chr2 20083949 20084306 -230603548 + MLT1A2 LTR MaLR 1 359 -15 212 283 0 19 chr2 20085248 20085301 -230602553 + G-rich Low_complexity Low_complexity 3 54 0 246 62 0 0 chr2 20085426 20085458 -230602396 + (TCCCC)n Simple_repeat Simple_repeat 2 33 0 2219 120 7 3 chr2 20085486 20085795 -230602059 - AluSx SINE Alu -2 310 1 272 191 62 80 chr2 20086165 20086278 -230601576 - MIR SINE MIR -67 141 47 187 323 92 0 chr2 20087864 20087929 -230599925 - L3 LINE CR1 -1 1576 1506 304 304 36 0 chr2 20088005 20088117 -230599737 + MLT1J2 LTR MaLR 39 154 -296 243 147 200 53 chr2 20088310 20088385 -230599469 + MLT1I LTR MaLR 315 400 -9 238 356 30 30 chr2 20088395 20088530 -230599324 - L3 LINE CR1 -107 1470 1336 2178 118 23 3 chr2 20088543 20088847 -230599007 - AluSx SINE Alu 0 312 3 816 204 16 54 chr2 20088875 20088965 -230598889 - MER5A DNA MER1_type -5 184 103 1762 176 19 53 chr2 20088965 20089340 -230598514 + MLT1A1 LTR MaLR 1 362 -3 816 204 16 54 chr2 20089340 20089435 -230598419 - MER5A DNA MER1_type -86 103 6 291 288 61 38 chr2 20089588 20089720 -230598134 + L2 LINE L2 3138 3272 0 195 225 11 34 chr2 20090454 20090543 -230597311 + CT-rich Low_complexity Low_complexity 1 87 0 712 265 78 24 chr2 20090551 20090921 -230596933 - L1MC5 LINE L1 -35 7926 7537 373 265 72 36 chr2 20091779 20091945 -230595909 + L1ME4a LINE L1 5436 5607 -514 1478 180 13 49 chr2 20091951 20091967 -230595887 - AluJo SINE Alu 0 312 297 190 0 0 0 chr2 20091967 20091988 -230595866 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1478 180 13 49 chr2 20091988 20092141 -230595713 - AluJo SINE Alu -15 297 145 2075 138 17 0 chr2 20092141 20092430 -230595424 - AluSx SINE Alu -12 300 7 1478 180 13 49 chr2 20092430 20092565 -230595289 - AluJo SINE Alu -167 145 7 610 270 95 5 chr2 20092579 20092801 -230595053 - L2 LINE L2 0 3313 3072 442 318 103 26 chr2 20092805 20093140 -230594714 + L1ME4a LINE L1 5608 5977 -144 2353 88 3 0 chr2 20093140 20093448 -230594406 + AluSq SINE Alu 1 309 -4 442 318 103 26 chr2 20093448 20093490 -230594364 + L1ME4a LINE L1 5977 6014 -107 405 288 8 38 chr2 20093950 20094082 -230593772 - MIR SINE MIR -115 147 20 508 260 80 30 chr2 20094380 20094580 -230593274 - MIR SINE MIR 0 262 53 1734 137 43 47 chr2 20094595 20094895 -230592959 - AluJb SINE Alu -13 299 1 266 111 0 0 chr2 20095030 20095075 -230592779 + MADE1 DNA Mariner 1 45 -35 490 276 19 26 chr2 20095140 20095296 -230592558 - MIR SINE MIR -105 157 3 347 320 35 23 chr2 20097515 20097571 -230590283 - MIR SINE MIR -6 256 202 324 0 0 0 chr2 20097571 20097607 -230590247 + (TG)n Simple_repeat Simple_repeat 1 36 0 347 320 35 23 chr2 20097607 20097625 -230590229 - MIR SINE MIR -60 202 186 3645 173 28 17 chr2 20097625 20098346 -230589508 - L1MB7 LINE L1 -19 6165 5437 347 320 35 23 chr2 20098346 20098442 -230589412 - MIR SINE MIR -76 186 83 211 298 14 116 chr2 20099225 20099440 -230588414 - L2 LINE L2 -95 3177 2985 1553 120 4 12 chr2 20099850 20100091 -230587763 + AluY SINE Alu 72 310 -1 2903 208 20 85 chr2 20100437 20101374 -230586480 - LTR5 LTR ERVK -93 876 1 2028 96 0 30 chr2 20101533 20101857 -230585997 - AluY SINE Alu 0 311 1 1384 249 62 48 chr2 20102132 20102794 -230585060 - L1MC5 LINE L1 -385 7576 6906 2014 88 3 114 chr2 20102806 20103158 -230584696 - AluSq SINE Alu 0 313 1 911 182 61 74 chr2 20103159 20103390 -230584464 - L1MC5 LINE L1 -1041 6920 6693 1793 202 16 47 chr2 20103390 20103776 -230584078 - MLT1A2 LTR MaLR 0 374 1 1549 269 58 33 chr2 20103783 20104035 -230583819 - L1MC5 LINE L1 -1866 5942 5698 1869 128 62 0 chr2 20104035 20104325 -230583529 - AluSx SINE Alu -4 308 1 1549 269 58 33 chr2 20104325 20104670 -230583184 - L1MC5 LINE L1 -2110 5698 5330 22 35 0 0 chr2 20104741 20104770 -230583084 + AT_rich Low_complexity Low_complexity 1 29 0 986 207 78 18 chr2 20106102 20106496 -230581358 + L1MC/D LINE L1 5067 5491 -743 847 252 48 9 chr2 20106920 20107150 -230580704 - MIR SINE MIR 0 262 24 468 203 15 60 chr2 20107289 20107392 -230580462 - MLT1J1 LTR MaLR -317 129 32 2135 113 0 43 chr2 20107392 20107718 -230580136 + AluSx SINE Alu 1 312 0 468 203 15 60 chr2 20107718 20107747 -230580107 - MLT1J1 LTR MaLR -414 32 3 1455 136 35 112 chr2 20107763 20108102 -230579752 - AluYb8 SINE Alu -5 313 1 265 242 55 86 chr2 20109013 20109141 -230578713 + MIR SINE MIR 61 184 -78 340 291 48 0 chr2 20109332 20109435 -230578419 + MLT1L LTR MaLR 195 302 -313 1731 137 3 61 chr2 20109443 20109771 -230578083 + AluJb SINE Alu 3 311 -1 477 176 130 38 chr2 20109860 20109991 -230577863 - MLT1C LTR MaLR -324 143 1 353 178 129 40 chr2 20110016 20110117 -230577737 - MLT1C LTR MaLR -352 115 6 747 289 81 65 chr2 20110125 20110954 -230576900 + L2 LINE L2 2481 3313 0 2287 100 0 0 chr2 20111811 20112122 -230575732 + AluSx SINE Alu 1 311 -1 284 295 86 60 chr2 20112303 20112427 -230575427 + L2 LINE L2 2618 2737 -577 2269 107 0 0 chr2 20112427 20112736 -230575118 + AluSx SINE Alu 1 309 -3 284 295 86 60 chr2 20112736 20112947 -230574907 + L2 LINE L2 2737 2962 -352 1594 251 42 20 chr2 20112956 20113406 -230574448 + MLT1C LTR MaLR 1 460 -7 277 373 85 0 chr2 20113730 20113848 -230574006 - L2 LINE L2 -4 3309 3182 182 340 21 21 chr2 20114059 20114153 -230573701 - MIR SINE MIR -61 147 54 2028 129 64 45 chr2 20114293 20114650 -230573204 - THE1B LTR MaLR 0 364 1 230 259 123 25 chr2 20115186 20115267 -230572587 - L2 LINE L2 0 3272 3184 2097 116 0 26 chr2 20116973 20117284 -230570570 - AluSx SINE Alu -9 303 1 189 331 88 38 chr2 20117459 20117722 -230570132 - L2 LINE L2 -344 2970 2695 1471 220 39 33 chr2 20117833 20118196 -230569658 + MLT1A1 LTR MaLR 1 365 0 389 235 35 35 chr2 20119796 20119911 -230567943 + MIR SINE MIR 20 134 -74 446 293 152 10 chr2 20119940 20120138 -230567716 - MIR SINE MIR -12 250 25 1419 221 140 35 chr2 20120140 20120234 -230567620 + MLT1D LTR MaLR 1 84 -421 1594 178 49 0 chr2 20120234 20120520 -230567334 + AluJb SINE Alu 1 300 -12 1419 221 140 35 chr2 20120520 20120882 -230566972 + MLT1D LTR MaLR 84 505 0 2126 128 0 0 chr2 20121970 20122275 -230565579 + AluSg SINE Alu 1 305 -5 318 294 18 9 chr2 20122783 20122892 -230564962 + MER94 DNA DNA 10 119 -15 320 197 15 15 chr2 20124929 20124995 -230562859 - MIR SINE MIR -176 86 21 539 271 127 14 chr2 20125148 20125369 -230562485 + MIR SINE MIR 17 262 0 180 176 0 0 chr2 20125421 20125455 -230562399 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 660 311 48 4 chr2 20126218 20126446 -230561408 - MIR SINE MIR -1 261 24 325 306 100 19 chr2 20126471 20126631 -230561223 - MIR SINE MIR -23 239 67 465 261 99 0 chr2 20127553 20127695 -230560159 - MER103 DNA DNA -9 157 2 274 306 162 14 chr2 20127921 20128137 -230559717 - L2 LINE L2 -40 3232 2985 1834 148 21 0 chr2 20129267 20129557 -230558297 - AluJb SINE Alu -16 296 1 291 214 71 0 chr2 20129557 20129618 -230558236 - L2 LINE L2 -7 3265 3197 1982 141 0 3 chr2 20130022 20130321 -230557533 - AluSx SINE Alu -14 298 1 371 294 76 0 chr2 20131254 20131373 -230556481 + MIR SINE MIR 16 143 -65 252 152 22 0 chr2 20131863 20131909 -230555945 + L2 LINE L2 3223 3269 -3 2031 125 3 10 chr2 20132571 20132882 -230554972 - AluSx SINE Alu -3 309 1 204 308 122 17 chr2 20133632 20133804 -230554050 - L2 LINE L2 -167 3105 2916 654 204 9 0 chr2 20133872 20133985 -230553869 + MER81 DNA DNA 1 114 0 872 164 68 53 chr2 20134634 20134870 -230552984 + AluJb SINE Alu 76 314 0 2071 97 35 3 chr2 20135119 20135409 -230552445 + AluSx SINE Alu 1 299 -13 742 106 176 24 chr2 20135414 20135584 -230552270 + L1MB4 LINE L1 5985 6180 0 * 1639 142 36 45 chr2 20135582 20135919 -230551935 + L1MD3 LINE L1 7652 7985 -10 3716 179 41 8 chr2 20136409 20137113 -230550741 - LTR8A LTR ERV1 0 727 1 417 330 86 14 chr2 20138321 20138542 -230549312 - MIR SINE MIR -6 256 20 226 200 36 0 chr2 20140075 20140130 -230547724 - L2 LINE L2 -213 3059 3003 247 286 26 13 chr2 20142375 20142452 -230545402 - MIR SINE MIR -110 152 75 391 274 76 30 chr2 20142714 20142911 -230544943 + MIR SINE MIR 47 252 -10 8353 79 5 10 chr2 20143925 20145002 -230542852 - MER11C LTR ERVK 0 1071 1 328 253 0 35 chr2 20145051 20145138 -230542716 - L2 LINE L2 -5 3308 3225 1415 192 58 10 chr2 20145147 20145599 -230542255 + MLT1F1 LTR MaLR 10 567 0 222 339 119 26 chr2 20145861 20146239 -230541615 - L2 LINE L2 -453 2861 2449 1580 214 35 6 chr2 20146429 20146771 -230541083 + MLT1A2 LTR MaLR 8 359 -15 1043 222 38 8 chr2 20146934 20147200 -230540654 + Charlie1b DNA MER1_type 53 326 -197 674 141 0 0 chr2 20147214 20147306 -230540548 + AluSx SINE Alu 2 93 -219 1347 118 29 0 chr2 20147363 20147567 -230540287 + AluSx SINE Alu 103 312 0 992 151 5 24 chr2 20147567 20147772 -230540082 + Charlie1b DNA MER1_type 323 523 0 205 200 0 22 chr2 20148747 20148792 -230539062 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 190 292 97 0 chr2 20149493 20149565 -230538289 + L2 LINE L2 2985 3063 -209 650 210 0 8 chr2 20149613 20149732 -230538122 + FLAM_C SINE Alu 2 119 -24 2047 86 0 0 chr2 20149858 20150126 -230537728 + AluY SINE Alu 40 307 -4 199 208 236 0 chr2 20150205 20150277 -230537577 - L2 LINE L2 -2 3311 3223 290 333 119 6 chr2 20151331 20151508 -230536346 + MIR SINE MIR 63 259 -3 1884 171 14 112 chr2 20152061 20152290 -230535564 - MSTD LTR MaLR 0 396 229 1820 149 7 7 chr2 20152290 20152586 -230535268 - AluJb SINE Alu -16 296 1 1884 171 14 112 chr2 20152586 20152795 -230535059 - MSTD LTR MaLR -167 229 1 1791 227 53 27 chr2 20153022 20153472 -230534382 - LTR40b LTR ERVL 0 462 1 2022 85 67 0 chr2 20153615 20153897 -230533957 + AluSq SINE Alu 1 301 -12 826 224 12 0 chr2 20154495 20154665 -230533189 - MER45A DNA AcHobo -5 173 2 345 160 53 0 chr2 20154799 20154893 -230532961 + CT-rich Low_complexity Low_complexity 2 100 0 391 249 89 30 chr2 20155249 20155418 -230532436 - HAL1 LINE L1 -105 2402 2224 454 193 132 89 chr2 20156246 20156459 -230531395 - HAL1 LINE L1 -891 1616 1395 192 267 100 0 chr2 20158263 20158323 -230529531 - MIR3 SINE MIR -34 174 109 1158 127 0 11 chr2 20158597 20158941 -230528913 + (TGGA)n Simple_repeat Simple_repeat 1 341 0 425 296 40 0 chr2 20159807 20159932 -230527922 - MIR SINE MIR -56 152 23 340 333 113 6 chr2 20160377 20160554 -230527300 + L2 LINE L2 3074 3269 -3 213 191 24 0 chr2 20160591 20160633 -230527221 + L2 LINE L2 3261 3303 -10 260 296 12 0 chr2 20160699 20160780 -230527074 + (CA)n Simple_repeat Simple_repeat 1 82 0 4118 191 27 46 chr2 20160876 20161372 -230526482 + MER21B LTR ERV1 1 476 -387 1913 154 3 3 chr2 20161372 20161683 -230526171 + AluJo SINE Alu 1 311 -1 4118 191 27 46 chr2 20161683 20162064 -230525790 + MER21B LTR ERV1 476 862 -1 257 159 63 0 chr2 20162428 20162491 -230525363 - MIR3 SINE MIR -38 170 104 623 175 3 1 chr2 20162961 20163074 -230524780 + MER5A DNA MER1_type 4 106 -72 328 321 57 13 chr2 20163359 20163518 -230524336 - L3 LINE CR1 -68 1509 1344 2038 145 3 0 chr2 20163648 20163959 -230523895 - AluSx SINE Alu 0 312 1 2323 95 0 0 chr2 20165776 20166082 -230521772 - AluSq SINE Alu -7 306 1 313 342 52 36 chr2 20166217 20166410 -230521444 - MIR SINE MIR -16 246 51 566 287 165 6 chr2 20167431 20167776 -230520078 - L2 LINE L2 -298 3015 2622 202 298 106 21 chr2 20167901 20167995 -230519859 - L2 LINE L2 -37 3235 3134 729 181 90 23 chr2 20168604 20168781 -230519073 + MER53 DNA DNA 1 189 0 278 333 65 0 chr2 20171152 20171275 -230516579 - MIR SINE MIR -62 146 16 412 304 163 9 chr2 20171641 20171868 -230515986 + MIR SINE MIR 1 262 0 226 186 14 129 chr2 20172165 20172235 -230515619 + MLT1E2 LTR MaLR 1 62 -564 516 261 46 20 chr2 20172238 20172391 -230515463 + MLT1C LTR MaLR 1 157 -348 619 194 60 8 chr2 20172400 20172534 -230515320 + MLT1C LTR MaLR 284 424 -43 442 333 36 0 chr2 20173991 20174178 -230513676 + MIR SINE MIR 4 200 -62 1583 153 47 14 chr2 20175158 20175456 -230512398 - AluJb SINE Alu 0 307 1 186 176 29 0 chr2 20175789 20175823 -230512031 + L2 LINE L2 3263 3297 -16 352 303 125 7 chr2 20177831 20177983 -230509871 - MIR SINE MIR -7 255 86 2081 136 3 3 chr2 20179411 20179720 -230508134 + AluSx SINE Alu 1 309 -3 619 294 22 15 chr2 20179755 20179986 -230507868 + L1ME4a LINE L1 5316 5548 -616 1686 215 97 63 chr2 20180450 20180511 -230507343 - MLT1E1 LTR MaLR -4 650 593 2287 112 0 0 chr2 20180511 20180823 -230507031 - AluSx SINE Alu 0 312 1 1686 215 97 63 chr2 20180823 20181346 -230506508 - MLT1E1 LTR MaLR -61 593 46 442 250 0 10 chr2 20182407 20182511 -230505343 - LTR67 LTR ERVL -22 535 433 594 315 25 30 chr2 20184424 20184471 -230503383 - MIR SINE MIR -15 247 201 528 225 117 0 chr2 20184471 20184591 -230503263 - MER94 DNA DNA 0 134 1 594 315 25 30 chr2 20184591 20184778 -230503076 - MIR SINE MIR -61 201 14 230 248 353 20 chr2 20185026 20185179 -230502675 - MIR SINE MIR -22 240 37 444 278 150 32 chr2 20186123 20186529 -230501325 + L1ME4a LINE L1 5515 5968 -153 1020 86 0 0 chr2 20186808 20186948 -230500906 + AluY SINE Alu 171 310 -1 235 268 118 0 chr2 20187303 20187430 -230500424 + L1ME4a LINE L1 5978 6119 -2 1758 103 7 39 chr2 20187519 20187800 -230500054 - AluSq SINE Alu -41 272 1 329 338 58 29 chr2 20188215 20188493 -230499361 - L3 LINE CR1 -202 1375 1090 218 350 29 0 chr2 20189946 20190049 -230497805 - MIR SINE MIR -77 185 80 1824 149 28 0 chr2 20190748 20191037 -230496817 - AluSx SINE Alu -15 297 1 655 174 35 0 chr2 20191340 20191455 -230496399 + AluSg/x SINE Alu 124 242 -68 237 266 231 6 chr2 20191551 20191720 -230496134 + L2 LINE L2 2553 2759 -555 506 224 75 0 chr2 20191723 20191830 -230496024 - MLT1D LTR MaLR -3 464 350 745 261 62 28 chr2 20191866 20192135 -230495719 - MLT1D LTR MaLR -190 277 1 622 254 131 30 chr2 20192136 20192607 -230495247 + L2 LINE L2 2756 3283 -30 186 43 0 0 chr2 20192613 20192636 -230495218 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 190 330 10 10 chr2 20193143 20193240 -230494614 + MIR SINE MIR 44 140 -68 508 249 75 35 chr2 20193257 20193430 -230494424 + MER117 DNA MER1_type 1 180 -17 1719 224 17 8 chr2 20193836 20194198 -230493656 - MLT1A1 LTR MaLR 0 365 1 342 277 0 24 chr2 20194446 20194529 -230493325 + MER91A DNA MER1_type 101 181 -15 2026 184 8 19 chr2 20195467 20195832 -230492022 + MLT1A1 LTR MaLR 3 363 -2 245 336 76 8 chr2 20196550 20196681 -230491173 + MIR3 SINE MIR 23 162 -46 3217 121 14 24 chr2 20197206 20197709 -230490145 - MER1A DNA MER1_type 0 529 32 2580 42 0 0 chr2 20197719 20198030 -230489824 - AluYa5 SINE Alu 0 311 1 360 0 0 0 chr2 20198782 20198822 -230489032 + (CA)n Simple_repeat Simple_repeat 2 41 0 267 250 40 48 chr2 20198934 20199058 -230488796 + MIR3 SINE MIR 68 190 -18 627 270 169 17 chr2 20199686 20200030 -230487824 + L1ME4a LINE L1 5721 6116 -5 22 0 0 0 chr2 20200030 20200052 -230487802 + AT_rich Low_complexity Low_complexity 1 22 0 2286 103 12 6 chr2 20200609 20200940 -230486914 + THE1B LTR MaLR 1 333 -31 958 50 0 0 chr2 20200940 20201061 -230486793 - AluY SINE Alu -1 310 190 4367 174 19 23 chr2 20201858 20202941 -230484913 + L1MB8 LINE L1 5098 6178 0 231 286 26 39 chr2 20203010 20203087 -230484767 + MIR SINE MIR 40 115 -93 444 301 173 9 chr2 20203691 20203915 -230483939 - MIR SINE MIR -11 251 1 3215 183 43 56 chr2 20204606 20205393 -230482461 - L1MB5 LINE L1 -13 6161 5385 5058 214 33 22 chr2 20205883 20206329 -230481525 - L1MB5 LINE L1 -744 5402 4962 2127 128 0 0 chr2 20206329 20206626 -230481228 - AluSx SINE Alu -15 297 1 5058 214 33 22 chr2 20206626 20207463 -230480391 - L1MB5 LINE L1 -1184 4962 4102 2328 88 3 0 chr2 20207463 20207770 -230480084 + AluSp SINE Alu 1 308 -5 5058 214 33 22 chr2 20207770 20207833 -230480021 - L1MB5 LINE L1 -2044 4102 4041 4449 142 21 27 chr2 20209214 20209960 -230477894 - L1MC1 LINE L1 0 6333 5592 1777 213 67 40 chr2 20209978 20210472 -230477382 - L1ME1 LINE L1 -7 6159 5653 895 224 25 0 chr2 20211200 20211401 -230476453 - MIR SINE MIR -2 260 55 2955 203 32 6 chr2 20211478 20212108 -230475746 - L1MB7 LINE L1 -9 6175 5530 1580 216 45 75 chr2 20213054 20213522 -230474332 + MLT1C LTR MaLR 6 459 -8 216 0 0 0 chr2 20216926 20216950 -230470904 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 272 380 51 28 chr2 20218764 20218980 -230468874 - MIR SINE MIR -27 235 15 421 294 28 0 chr2 20219358 20219501 -230468353 - MIR SINE MIR -59 203 57 285 321 83 13 chr2 20219735 20219930 -230467924 + MIR SINE MIR 13 212 -50 210 162 0 0 chr2 20221321 20221358 -230466496 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 433 269 52 0 chr2 20224907 20225041 -230462813 + L1ME3 LINE L1 6002 6142 -20 311 237 11 32 chr2 20225554 20225647 -230462207 - MIR SINE MIR -63 145 55 250 356 0 34 chr2 20226120 20226297 -230461557 + CT-rich Low_complexity Low_complexity 1 171 0 * 336 419 0 0 chr2 20226175 20226342 -230461512 + C-rich Low_complexity Low_complexity 1 167 0 792 209 36 52 chr2 20226443 20226692 -230461162 - L1ME1 LINE L1 -606 5568 5324 2117 113 0 7 chr2 20226699 20226999 -230460855 - AluSc SINE Alu -11 298 1 2196 112 0 7 chr2 20227001 20227304 -230460550 - AluY SINE Alu -10 301 1 382 207 190 17 chr2 20227763 20227879 -230459975 - MER5A DNA MER1_type -6 183 48 187 263 53 0 chr2 20228191 20228248 -230459606 + MER5A DNA MER1_type 78 137 -52 401 150 0 0 chr2 20229519 20229579 -230458275 + AluS SINE Alu 2 61 -257 1545 145 0 0 chr2 20229629 20229863 -230457991 + AluSg/x SINE Alu 67 300 -12 236 286 14 0 chr2 20229898 20229968 -230457886 - L2 LINE L2 -178 3094 3024 1717 153 19 26 chr2 20231466 20231779 -230456075 - AluJo SINE Alu -1 311 1 1948 156 0 9 chr2 20232442 20232757 -230455097 + AluJb SINE Alu 1 312 0 1699 201 13 29 chr2 20233065 20233517 -230454337 + MER89 LTR ERV1 3 545 -14 323 310 101 0 chr2 20234244 20234400 -230453454 - MIR SINE MIR -49 159 23 218 242 30 136 chr2 20236507 20236639 -230451215 + MIR SINE MIR 53 170 -92 204 329 73 0 chr2 20236638 20236738 -230451116 + MIR SINE MIR 17 129 -79 * 592 229 68 36 chr2 20236803 20236995 -230450859 - MER112 DNA MER1_type -39 221 24 23 0 0 0 chr2 20237266 20237289 -230450565 + GC_rich Low_complexity Low_complexity 1 23 0 304 286 95 0 chr2 20238109 20238235 -230449619 - MIR SINE MIR -56 206 69 286 226 128 0 chr2 20239471 20239573 -230448281 + MER5C DNA MER1_type 2 116 -208 336 182 143 0 chr2 20239605 20239682 -230448172 + MER5C DNA MER1_type 233 320 -4 317 225 12 12 chr2 20239917 20239997 -230447857 - MIR SINE MIR -72 190 111 408 200 120 0 chr2 20240544 20240644 -230447210 - MIR SINE MIR -43 219 108 183 271 51 0 chr2 20243054 20243113 -230444741 - L2 LINE L2 -12 3301 3240 1741 150 0 36 chr2 20243878 20244185 -230443669 + AluJo SINE Alu 1 296 -16 394 326 190 14 chr2 20244447 20244879 -230442975 + L2 LINE L2 1991 2498 -816 484 270 172 34 chr2 20245166 20245462 -230442392 + L2 LINE L2 2915 3251 -21 295 286 62 26 chr2 20247047 20247239 -230440615 - MIR SINE MIR -45 217 19 359 313 230 10 chr2 20247391 20247691 -230440163 + L2 LINE L2 876 1241 -2073 439 110 315 24 chr2 20247739 20247866 -230439988 + MER5A DNA MER1_type 5 168 -21 358 227 27 0 chr2 20247907 20247982 -230439872 - MER58B DNA MER1_type -8 333 257 2873 279 142 21 chr2 20248101 20249759 -230438095 + L2 LINE L2 1445 3309 -4 205 322 0 0 chr2 20250105 20250164 -230437690 - MIR3 SINE MIR -50 158 100 198 243 81 0 chr2 20250745 20250819 -230437035 + L2 LINE L2 3172 3251 -21 195 217 17 17 chr2 20250934 20250994 -230436860 + MIR SINE MIR 86 145 -117 405 344 119 19 chr2 20253029 20253459 -230434395 - L2 LINE L2 -665 2649 2177 212 238 38 95 chr2 20254293 20254398 -230433456 - L2 LINE L2 -182 3090 2992 1851 147 47 3 chr2 20255047 20255346 -230432508 - AluJo SINE Alu 0 312 1 266 240 19 39 chr2 20255509 20255613 -230432241 - L2 LINE L2 -1274 2040 1939 1962 159 88 11 chr2 20255644 20256079 -230431775 - MER31A LTR ERV1 -12 649 4 486 284 85 13 chr2 20256217 20256534 -230431320 - L1ME4a LINE L1 -13 6108 5769 264 266 63 25 chr2 20257372 20257530 -230430324 - L1ME4a LINE L1 -747 5399 5236 681 227 142 45 chr2 20257708 20257955 -230429899 - LTR16A LTR ERVL -118 332 62 1404 241 71 80 chr2 20258020 20258192 -230429662 - L1MC4 LINE L1 -72 7970 7798 2493 101 24 24 chr2 20258192 20258567 -230429287 - THE1C LTR MaLR 0 375 1 1404 241 71 80 chr2 20258567 20258670 -230429184 - L1MC4 LINE L1 -244 7798 7696 2669 19 0 13 chr2 20258670 20258984 -230428870 - AluYa5 SINE Alu -1 310 1 1404 241 71 80 chr2 20258984 20259329 -230428525 - L1MC4 LINE L1 -346 7696 7355 418 318 98 47 chr2 20259331 20259737 -230428117 - L1ME4a LINE L1 -951 5195 4769 322 287 24 37 chr2 20260310 20260474 -230427380 - L1ME LINE L1 -551 5570 5409 321 287 47 67 chr2 20260483 20260633 -230427221 - L3 LINE CR1 -820 757 611 222 37 0 0 chr2 20261163 20261190 -230426664 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 248 358 47 28 chr2 20261421 20261636 -230426218 - MIR SINE MIR -32 230 10 187 281 188 0 chr2 20262447 20262543 -230425311 - MIR SINE MIR -62 146 33 1477 155 45 31 chr2 20263124 20263415 -230424439 + AluJo SINE Alu 18 312 0 337 296 162 22 chr2 20263416 20263595 -230424259 + L3 LINE CR1 1374 1577 0 396 295 78 36 chr2 20264409 20264575 -230423279 + MIR SINE MIR 56 228 -34 252 276 0 0 chr2 20265165 20265223 -230422631 - MIR SINE MIR -57 151 94 26 0 0 0 chr2 20267337 20267363 -230420491 + GC_rich Low_complexity Low_complexity 1 26 0 234 0 0 0 chr2 20267495 20267521 -230420333 + (CGG)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr2 20267577 20267599 -230420255 + GC_rich Low_complexity Low_complexity 1 22 0 241 262 60 0 chr2 20269866 20269950 -230417904 + MIR3 SINE MIR 85 173 -35 27 49 0 0 chr2 20271192 20271233 -230416621 + GC_rich Low_complexity Low_complexity 1 41 0 181 222 0 0 chr2 20275737 20275773 -230412081 + L3b LINE CR1 1546 1581 -2 180 0 0 0 chr2 20278089 20278109 -230409745 + (CAG)n Simple_repeat Simple_repeat 3 22 0 1666 205 103 0 chr2 20282564 20282915 -230404939 - MSTD LTR MaLR 0 396 10 270 262 246 0 chr2 20282923 20283045 -230404809 + MIR SINE MIR 56 207 -55 331 255 129 20 chr2 20283910 20284080 -230403774 - MIR SINE MIR -14 248 43 21 0 0 0 chr2 20284158 20284179 -230403675 + AT_rich Low_complexity Low_complexity 1 21 0 1125 211 97 7 chr2 20284227 20284525 -230403329 - L1MC4 LINE L1 -135 7907 7583 711 176 7 37 chr2 20284526 20284662 -230403192 - FLAM_C SINE Alu -1 132 1 186 329 55 0 chr2 20288177 20288250 -230399604 - L2 LINE L2 0 3313 3237 277 370 109 18 chr2 20288380 20288710 -230399144 - L2 LINE L2 -338 2976 2617 2971 45 8 0 chr2 20288960 20289317 -230398537 - L1PA7 LINE L1 0 6154 5795 476 278 58 23 chr2 20290959 20291132 -230396722 - MIR SINE MIR -35 227 49 1606 189 10 7 chr2 20291288 20291595 -230396259 - AluJb SINE Alu -4 308 1 212 376 65 0 chr2 20292234 20292327 -230395527 - L2 LINE L2 -40 3232 3134 580 281 104 13 chr2 20293102 20293333 -230394521 + MIR SINE MIR 2 253 -9 436 245 71 92 chr2 20295524 20295569 -230392285 - MIR SINE MIR 0 262 218 2425 71 10 0 chr2 20295569 20295865 -230391989 - AluSg SINE Alu -10 300 2 436 245 71 92 chr2 20295865 20296093 -230391761 - MIR SINE MIR -44 218 9 458 292 118 40 chr2 20296947 20297447 -230390407 + L2 LINE L2 2003 2541 -773 652 221 96 0 chr2 20297876 20298084 -230389770 + Charlie4 DNA MER1_type 37 264 -1697 418 209 82 0 chr2 20298129 20298239 -230389615 + Charlie4 DNA MER1_type 1840 1958 -3 248 340 60 0 chr2 20298266 20298366 -230389488 - L2 LINE L2 0 3313 3208 2230 104 27 0 chr2 20298525 20298823 -230389031 + AluSg SINE Alu 1 306 -4 26 0 0 0 chr2 20298898 20298924 -230388930 + AT_rich Low_complexity Low_complexity 1 26 0 1163 197 75 7 chr2 20300760 20301055 -230386799 - MER33 DNA MER1_type -4 320 6 307 271 141 31 chr2 20302410 20302602 -230385252 - L1 LINE L1 -3784 2362 2150 2064 99 25 3 chr2 20302960 20303243 -230384611 - AluSp SINE Alu -24 289 1 416 273 85 62 chr2 20303291 20303713 -230384141 - HAL1 LINE L1 -6 2501 2070 744 277 155 40 chr2 20303939 20304268 -230383586 - L2 LINE L2 -1 3312 2946 288 294 116 22 chr2 20304540 20304815 -230383039 + L1ME4a LINE L1 5754 6054 -67 1268 267 134 45 chr2 20304853 20305726 -230382128 - HAL1 LINE L1 -423 2084 1134 885 194 55 20 chr2 20306029 20306230 -230381624 + MER3 DNA MER1_type 2 209 0 1072 209 7 62 chr2 20306753 20307026 -230380828 + L1MEc LINE L1 39 296 -6100 1805 213 25 64 chr2 20307033 20307596 -230380258 + MER74B LTR ERVL 59 599 -23 621 228 91 53 chr2 20307610 20307895 -230379959 + L1MEc LINE L1 296 591 -5805 3088 125 4 6 chr2 20307905 20308377 -230379477 + MER1A DNA MER1_type 56 526 -3 1351 213 18 3 chr2 20308382 20308710 -230379144 + L1MEc LINE L1 587 919 -5477 2924 168 45 24 chr2 20308710 20309156 -230378698 + L1MB7 LINE L1 4903 5338 -846 1993 137 55 3 chr2 20309156 20309499 -230378355 + MER46B DNA MER2_type 1 236 0 2924 168 45 24 chr2 20309499 20310015 -230377839 + L1MB7 LINE L1 5338 5894 -290 1435 264 42 28 chr2 20310018 20310661 -230377193 + L1M4 LINE L1 2954 3605 -2541 198 0 0 0 chr2 20310702 20310724 -230377130 + (TG)n Simple_repeat Simple_repeat 2 23 0 309 287 11 11 chr2 20310724 20310811 -230377043 + L1MC4 LINE L1 6618 6704 -1338 * 321 211 11 63 chr2 20310792 20310887 -230376967 - L1MC4 LINE L1 -1339 6703 6614 405 236 184 51 chr2 20310942 20311235 -230376619 + MLT1E2 LTR MaLR 1 332 -294 2313 58 11 0 chr2 20311239 20311516 -230376338 + AluY SINE Alu 17 296 -15 30017 89 13 8 chr2 20311536 20316008 -230371846 + L1PA6 LINE L1 11 4503 -1643 6803 51 0 0 chr2 20316008 20316837 -230371017 + L1PA6 LINE L1 5300 6135 -19 204 40 0 0 chr2 20316837 20316862 -230370992 + (TA)n Simple_repeat Simple_repeat 2 26 0 574 209 81 27 chr2 20316866 20317123 -230370731 + MLT1E2 LTR MaLR 326 503 -2 939 256 85 25 chr2 20317123 20317629 -230370225 + L1P5 LINE L1 4894 5431 -720 248 192 48 48 chr2 20317791 20317895 -230369959 + L1MA4 LINE L1 3224 3327 -4238 183 42 0 0 chr2 20317895 20317919 -230369935 + (TG)n Simple_repeat Simple_repeat 2 25 0 801 182 8 0 chr2 20317919 20318051 -230369803 - AluJb SINE Alu -28 284 152 14951 168 32 14 chr2 20318092 20321532 -230366322 + L1MA4 LINE L1 3344 6853 -743 822 117 8 0 chr2 20321532 20321659 -230366195 + L1PB1 LINE L1 6020 6148 -3 4566 144 30 20 chr2 20321693 20322210 -230365644 + L1MA4 LINE L1 6851 7382 -337 2196 82 13 20 chr2 20322210 20322514 -230365340 + AluSx SINE Alu 4 305 -7 4566 144 30 20 chr2 20322514 20322854 -230365000 + L1MA4 LINE L1 7382 7717 -2 1558 256 81 14 chr2 20322886 20323502 -230364352 + L1ME3A LINE L1 5434 6073 -97 22 56 0 0 chr2 20323569 20323605 -230364249 + AT_rich Low_complexity Low_complexity 1 36 0 296 301 75 53 chr2 20324450 20324583 -230363271 + L2 LINE L2 3137 3272 0 643 254 33 77 chr2 20325902 20326201 -230361653 + MLT1J LTR MaLR 224 509 -2 204 67 0 0 chr2 20327117 20327147 -230360707 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 757 183 7 0 chr2 20327208 20327345 -230360509 + FLAM_C SINE Alu 1 138 -5 27 29 0 0 chr2 20329521 20329555 -230358299 + AT_rich Low_complexity Low_complexity 1 34 0 830 131 21 0 chr2 20329761 20329906 -230357948 - L1MD1 LINE L1 -1 6635 6488 1091 147 0 18 chr2 20329917 20330080 -230357774 - FRAM SINE Alu -24 152 1 3200 149 7 4 chr2 20330092 20330648 -230357206 - L1MD1 LINE L1 -254 6382 5825 1328 229 12 114 chr2 20330661 20331259 -230356595 - L1MD1 LINE L1 -1059 5481 4945 1851 159 54 11 chr2 20331259 20331629 -230356225 + MSTA LTR MaLR 1 386 -42 2730 199 99 153 chr2 20331646 20332976 -230354878 - L1MD1 LINE L1 -1592 4948 3548 767 163 0 22 chr2 20332976 20333111 -230354743 - FLAM_C SINE Alu -6 137 6 2730 199 99 153 chr2 20333111 20333350 -230354504 - L1MD1 LINE L1 -2992 3548 3353 1634 175 11 14 chr2 20333350 20333511 -230354343 - AluJo SINE Alu -16 296 135 2128 131 0 13 chr2 20333511 20333817 -230354037 - AluJb SINE Alu -10 302 1 1634 175 11 14 chr2 20333817 20333940 -230353914 - AluJo SINE Alu -177 135 13 2730 199 99 153 chr2 20333940 20334124 -230353730 - L1MD1 LINE L1 -3187 3353 3161 6634 206 106 17 chr2 20334184 20336248 -230351606 - L1MD1 LINE L1 -3768 2772 348 2197 115 0 0 chr2 20336273 20336561 -230351293 + AluSx SINE Alu 1 288 -24 2822 164 54 5 chr2 20336593 20337148 -230350706 + MER34C LTR ERV1 4 585 0 1552 176 42 10 chr2 20337154 20337461 -230350393 - L1MD1 LINE L1 -6208 332 16 273 363 18 9 chr2 20337707 20337820 -230350034 - MIR3 SINE MIR -82 126 13 2988 122 69 29 chr2 20337843 20338085 -230349769 + MER41C LTR ERV1 3 234 -320 2125 113 0 0 chr2 20338085 20338404 -230349450 + AluSg SINE Alu 1 319 0 2988 122 69 29 chr2 20338404 20338683 -230349171 + MER41C LTR ERV1 234 546 -8 206 157 14 143 chr2 20338701 20338771 -230349083 + MIR3 SINE MIR 139 199 -9 585 203 171 6 chr2 20339137 20339295 -230348559 + MIR SINE MIR 40 223 -39 316 270 11 0 chr2 20339366 20339455 -230348399 - MIR SINE MIR -54 208 119 1428 158 17 8 chr2 20340481 20340721 -230347133 - AluJo SINE Alu -70 242 1 3014 175 35 13 chr2 20340723 20341636 -230346218 - L1MC1 LINE L1 -507 5826 4891 1913 175 25 35 chr2 20341637 20342072 -230345782 - L1MA7 LINE L1 -201 6090 5660 2378 241 22 10 chr2 20342095 20342879 -230344975 - L1MCa LINE L1 -3163 3263 2450 249 27 0 0 chr2 20342905 20342942 -230344912 - AluJb SINE Alu -2 300 264 1460 142 0 17 chr2 20342942 20343174 -230344680 - AluJb SINE Alu -84 228 1 2360 125 142 43 chr2 20343177 20343426 -230344428 - L1MCa LINE L1 -3973 2453 2230 864 0 0 0 chr2 20343426 20343525 -230344329 - L1PA2 LINE L1 0 6155 6057 2360 125 142 43 chr2 20343525 20343833 -230344021 - L1MCa LINE L1 -4196 2230 1841 * 6162 170 24 44 chr2 20343828 20345231 -230342623 - L1MCa LINE L1 -5048 1378 3 1298 241 29 26 chr2 20345219 20345600 -230342254 - L1ME LINE L1 -471 5699 5318 * 767 142 35 30 chr2 20345600 20345769 -230342085 + L1MA8 LINE L1 6117 6286 -5 558 329 62 22 chr2 20345887 20346209 -230341645 - L2 LINE L2 -132 3181 2847 387 271 101 12 chr2 20347874 20348070 -230339784 - MIR SINE MIR -16 246 1 571 250 47 0 chr2 20349152 20349280 -230338574 - L2 LINE L2 0 3272 3139 183 279 0 49 chr2 20349589 20349650 -230338204 - L2 LINE L2 -345 2968 2911 2160 140 0 0 chr2 20350133 20350433 -230337421 - AluSx SINE Alu -10 302 3 3064 117 45 0 chr2 20350791 20351262 -230336592 + L1PA16 LINE L1 5665 6156 -10 581 272 135 66 chr2 20351913 20351983 -230335871 + HAL1 LINE L1 984 1048 -1459 1985 157 0 19 chr2 20351983 20352301 -230335553 - AluJo SINE Alu 0 312 1 581 272 135 66 chr2 20352301 20352579 -230335275 + HAL1 LINE L1 1048 1356 -1151 401 215 11 11 chr2 20352587 20352680 -230335174 - MLT1C LTR MaLR 0 467 375 828 241 64 0 chr2 20352748 20352968 -230334886 - MLT1D LTR MaLR 0 505 272 330 67 0 0 chr2 20353077 20353122 -230334732 + (CAA)n Simple_repeat Simple_repeat 2 46 0 600 272 74 6 chr2 20353737 20353899 -230333955 + L2 LINE L2 2843 3015 -298 1965 244 71 62 chr2 20353945 20354316 -230333538 + L1MC4 LINE L1 6943 7309 -733 1977 136 6 43 chr2 20354316 20354639 -230333215 + AluSx SINE Alu 1 311 -1 1965 244 71 62 chr2 20354639 20355226 -230332628 + L1MC4 LINE L1 7309 7914 -128 390 21 0 0 chr2 20355226 20355273 -230332581 + (TG)n Simple_repeat Simple_repeat 2 48 0 1965 244 71 62 chr2 20355273 20355404 -230332450 + L1MC4 LINE L1 7914 8042 0 295 219 34 164 chr2 20355434 20355672 -230332182 + L2 LINE L2 3077 3283 -30 659 295 88 68 chr2 20355680 20356135 -230331719 + HAL1 LINE L1 349 794 -1713 2324 101 0 10 chr2 20356135 20356441 -230331413 - AluSx SINE Alu -9 303 1 659 295 88 68 chr2 20356441 20356893 -230330961 + HAL1 LINE L1 794 1274 -1233 349 258 61 8 chr2 20356942 20357074 -230330780 + HAL1 LINE L1 1388 1526 -981 2039 217 30 40 chr2 20357656 20358181 -230329673 + MLT2B1 LTR ERVL 1 520 0 441 328 36 36 chr2 20358368 20358618 -230329236 + L1MEd LINE L1 811 1060 -5059 2226 208 47 55 chr2 20360458 20361053 -230326801 - MLT1E LTR MaLR -3 590 1 21 36 0 0 chr2 20361375 20361403 -230326451 + AT_rich Low_complexity Low_complexity 1 28 0 195 289 13 40 chr2 20361552 20361628 -230326226 - L2 LINE L2 -184 3088 3015 525 220 8 8 chr2 20361777 20361909 -230325945 + L1PA16 LINE L1 6030 6161 -5 408 237 178 8 chr2 20362181 20362417 -230325437 - L1ME4a LINE L1 -245 5876 5601 586 197 146 0 chr2 20363478 20363615 -230324239 - MER5A DNA MER1_type -2 187 31 252 307 43 17 chr2 20364870 20365000 -230322854 + MIR SINE MIR 21 150 -63 219 285 111 35 chr2 20365263 20365407 -230322447 + L2 LINE L2 1587 1741 -1573 1232 250 122 47 chr2 20365580 20366096 -230321758 - MLT1H1 LTR MaLR 0 555 1 377 189 95 116 chr2 20366161 20366351 -230321503 + MER112 DNA MER1_type 2 187 -73 992 248 62 30 chr2 20366386 20366725 -230321129 + MLT1I LTR MaLR 60 409 0 6449 174 66 52 chr2 20367322 20368822 -230319032 + MER52A LTR ERV1 235 1755 0 288 284 80 0 chr2 20371135 20371223 -230316631 + MIR3 SINE MIR 108 202 -6 1641 229 96 43 chr2 20372784 20373347 -230314507 + MLT1E LTR MaLR 1 593 0 452 291 79 79 chr2 20373399 20373653 -230314201 - MIR SINE MIR 0 262 9 405 366 42 0 chr2 20374219 20374361 -230313493 + L2 LINE L2 3125 3272 0 236 316 18 0 chr2 20374492 20374549 -230313305 + L2 LINE L2 3242 3299 -14 508 339 44 24 chr2 20375335 20375583 -230312271 - MIR SINE MIR -9 253 1 1080 132 33 11 chr2 20375593 20375775 -230312079 - MER5A DNA MER1_type 0 189 4 310 325 139 71 chr2 20375928 20376180 -230311674 + L2 LINE L2 2954 3222 -50 213 244 0 0 chr2 20376214 20376259 -230311595 + MIR3 SINE MIR 153 197 -11 541 256 38 37 chr2 20377138 20377313 -230310541 + MIR SINE MIR 2 178 -63 2036 121 52 0 chr2 20377683 20377973 -230309881 - AluSx SINE Alu -7 305 1 921 146 0 0 chr2 20378345 20378482 -230309372 + LTR5 LTR ERVK 1 137 -832 204 159 0 23 chr2 20379186 20379230 -230308624 + (TA)n Simple_repeat Simple_repeat 1 43 0 1470 107 5 18 chr2 20379528 20379752 -230308102 + L1PA8A LINE L1 5909 6129 -2 21 57 0 0 chr2 20380035 20380070 -230307784 + AT_rich Low_complexity Low_complexity 1 35 0 28 0 0 0 chr2 20380498 20380526 -230307328 + AT_rich Low_complexity Low_complexity 1 28 0 1071 157 51 0 chr2 20382365 20382543 -230305311 + MER5A DNA MER1_type 3 189 0 558 219 51 0 chr2 20382640 20382777 -230305077 - L1MCb LINE L1 -2343 4221 4078 337 250 10 0 chr2 20382779 20382883 -230304971 - L1MCb LINE L1 -2660 3904 3800 3819 232 104 31 chr2 20382887 20383972 -230303882 - L1MCb LINE L1 -2803 3761 2756 1800 187 0 3 chr2 20383972 20384272 -230303582 - AluJb SINE Alu -13 299 1 3819 232 104 31 chr2 20384272 20384383 -230303471 - L1MCb LINE L1 -3808 2756 2654 1781 194 0 3 chr2 20384383 20384682 -230303172 + AluJb SINE Alu 1 298 -14 3819 232 104 31 chr2 20384682 20384862 -230302992 - L1MCb LINE L1 -3910 2654 2488 2072 139 0 7 chr2 20384862 20385171 -230302683 + AluJb SINE Alu 1 307 -5 3819 232 104 31 chr2 20385171 20386466 -230301388 - L1MCb LINE L1 -4076 2488 1288 2017 116 7 3 chr2 20386466 20386751 -230301103 - AluSx SINE Alu -26 286 1 3819 232 104 31 chr2 20386751 20387543 -230300311 - L1MCb LINE L1 -5276 1288 52 2079 158 7 0 chr2 20387543 20387853 -230300001 - AluSx SINE Alu 0 312 1 3819 232 104 31 chr2 20387853 20387909 -230299945 - L1MCb LINE L1 -6512 52 1 1175 181 93 41 chr2 20389414 20389757 -230298097 + MLT1A1 LTR MaLR 5 365 0 1682 116 154 7 chr2 20389915 20390207 -230297647 + MER1B DNA MER1_type 2 336 -1 252 309 57 57 chr2 20390735 20390929 -230296925 + L2 LINE L2 2634 2827 -487 1101 205 62 4 chr2 20391458 20391702 -230296152 + MIR SINE MIR 2 259 -3 247 304 40 20 chr2 20391983 20392131 -230295723 - L1P LINE L1 -1119 5027 4877 315 288 81 0 chr2 20392209 20392320 -230295534 - L1M4 LINE L1 -1355 4791 4672 27 49 0 0 chr2 20392395 20392436 -230295418 + AT_rich Low_complexity Low_complexity 1 41 0 763 178 100 33 chr2 20392521 20392701 -230295153 - MIR SINE MIR 0 262 71 201 269 19 0 chr2 20392872 20392924 -230294930 + MIR SINE MIR 208 260 -2 930 76 0 2 chr2 20393033 20393175 -230294679 + L1PA8 LINE L1 6015 6154 -14 475 278 223 4 chr2 20393352 20393625 -230294229 - L2 LINE L2 -14 3299 2967 382 357 66 0 chr2 20393778 20393960 -230293894 - L2 LINE L2 -428 2886 2693 2093 208 20 25 chr2 20393967 20394251 -230293603 + L1M4 LINE L1 3329 3613 -2533 2372 126 5 30 chr2 20394251 20394624 -230293230 - THE1B LTR MaLR 0 364 1 2093 208 20 25 chr2 20394624 20394930 -230292924 + L1M4 LINE L1 3613 3916 -2230 257 226 0 0 chr2 20394930 20394983 -230292871 + MER69 DNA AcHobo 624 676 -550 186 43 0 0 chr2 20395940 20395963 -230291891 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 342 0 0 0 chr2 20396207 20396245 -230291609 + (CA)n Simple_repeat Simple_repeat 1 38 0 298 296 17 26 chr2 20396374 20396489 -230291365 + L2 LINE L2 301 414 -2900 234 385 70 5 chr2 20396693 20396906 -230290948 + L2 LINE L2 584 810 -2504 643 200 107 0 chr2 20396912 20397062 -230290792 - MER5A DNA MER1_type -21 168 3 670 299 147 33 chr2 20397427 20397751 -230290103 + HAL1 LINE L1 427 713 -1794 652 204 9 0 chr2 20397751 20397864 -230289990 - MER81 DNA DNA 0 114 1 670 299 147 33 chr2 20397864 20398117 -230289737 + HAL1 LINE L1 713 1070 -1437 * 1503 234 168 44 chr2 20398114 20398813 -230289041 + HAL1 LINE L1 1315 2147 -360 316 40 40 0 chr2 20398813 20398863 -230288991 + (TATAA)n Simple_repeat Simple_repeat 1 52 0 1503 234 168 44 chr2 20398863 20399042 -230288812 + HAL1 LINE L1 2147 2302 -205 810 101 0 0 chr2 20399044 20399153 -230288701 + AluSg/x SINE Alu 188 296 -16 227 175 52 103 chr2 20399161 20399202 -230288652 + HAL1 LINE L1 2306 2348 -159 1997 153 0 3 chr2 20399202 20399509 -230288345 + AluSx SINE Alu 1 306 -6 227 175 52 103 chr2 20399509 20399564 -230288290 + HAL1 LINE L1 2348 2397 -110 1474 149 20 92 chr2 20399607 20399997 -230287857 - L1MA4A LINE L1 -3 6300 5939 356 340 59 30 chr2 20400360 20400731 -230287123 + L1M4 LINE L1 4989 5370 -776 2170 115 3 16 chr2 20400875 20401189 -230286665 - AluY SINE Alu -1 310 1 349 287 108 54 chr2 20401253 20401339 -230286515 + L1ME4a LINE L1 5852 5932 -189 228 35 0 0 chr2 20401339 20401368 -230286486 + (CA)n Simple_repeat Simple_repeat 2 30 0 349 287 108 54 chr2 20401368 20401504 -230286350 + L1ME4a LINE L1 5932 6086 -35 387 60 0 0 chr2 20402190 20402240 -230285614 + (TG)n Simple_repeat Simple_repeat 1 50 0 303 222 56 78 chr2 20402241 20402331 -230285523 - L1MC4 LINE L1 -1341 6701 6614 2022 121 0 0 chr2 20402347 20402611 -230285243 - AluSx SINE Alu -48 264 1 740 193 47 18 chr2 20403041 20403212 -230284642 + LTR41 LTR ERVL 6 181 -592 1063 193 43 5 chr2 20403266 20403473 -230284381 + MER20 DNA MER1_type 1 215 -4 231 136 0 45 chr2 20404139 20404183 -230283671 + LTR41 LTR ERVL 731 772 -1 246 253 108 0 chr2 20404482 20404565 -230283289 + L1M4 LINE L1 5495 5586 -592 315 302 121 60 chr2 20404834 20405016 -230282838 - HAL1 LINE L1 -2314 193 1 26 0 0 0 chr2 20406144 20406170 -230281684 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr2 20406933 20406965 -230280889 + AT_rich Low_complexity Low_complexity 1 32 0 3113 256 111 45 chr2 20407000 20407423 -230280431 + L1M4 LINE L1 2947 3341 -2805 183 42 0 0 chr2 20407423 20407447 -230280407 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3113 256 111 45 chr2 20407447 20408629 -230279225 + L1M4 LINE L1 3341 4444 -1702 2296 60 20 10 chr2 20408629 20408927 -230278927 + AluY SINE Alu 1 301 -10 3113 256 111 45 chr2 20408927 20409360 -230278494 + L1M4 LINE L1 4444 5135 -1011 2050 97 7 58 chr2 20409360 20409669 -230278185 + AluSc SINE Alu 2 294 -15 3113 256 111 45 chr2 20409669 20409764 -230278090 + L1M4 LINE L1 5135 5222 -924 195 184 0 0 chr2 20409767 20409805 -230278049 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 321 224 149 0 chr2 20409887 20409994 -230277860 + L1M LINE L1 5258 5380 -786 1535 237 117 28 chr2 20410247 20410844 -230277010 - MLT1G LTR MaLR 0 590 5 1846 146 48 13 chr2 20410949 20411265 -230276589 + MER1B DNA MER1_type 1 327 -12 2377 38 7 3 chr2 20411273 20411566 -230276288 - AluY SINE Alu -15 296 3 2312 77 3 3 chr2 20411736 20412035 -230275819 - AluY SINE Alu -12 299 1 811 198 21 103 chr2 20413085 20413328 -230274526 - MIR SINE MIR -20 242 20 567 281 90 31 chr2 20413587 20414248 -230273606 - L1MC4a LINE L1 -748 5398 5214 1425 163 0 4 chr2 20414702 20414929 -230272925 - AluJb SINE Alu -2 310 85 3511 235 84 19 chr2 20415351 20417617 -230270237 + L1MD2 LINE L1 1296 3718 -2822 401 202 155 8 chr2 20417731 20417860 -230269994 + L1MD2 LINE L1 4129 4276 -2264 2651 203 133 5 chr2 20417869 20418543 -230269311 + L1MD2 LINE L1 5992 6752 -1 21 36 0 0 chr2 20418544 20418572 -230269282 + AT_rich Low_complexity Low_complexity 1 28 0 13041 26 0 0 chr2 20419717 20422026 -230265828 + L1PA5 LINE L1 3838 6151 -3 24 0 0 0 chr2 20422082 20422106 -230265748 + AT_rich Low_complexity Low_complexity 1 24 0 2228 53 43 0 chr2 20422380 20422541 -230265313 - AluY SINE Alu -17 294 114 189 94 0 0 chr2 20422541 20422573 -230265281 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2228 53 43 0 chr2 20422573 20422693 -230265161 - AluY SINE Alu -197 114 1 1910 153 46 17 chr2 20423750 20423886 -230263968 - LTR23 LTR ERV1 0 467 336 2725 13 3 0 chr2 20423886 20424187 -230263667 - AluYb8 SINE Alu -3 315 14 1910 153 46 17 chr2 20424187 20424469 -230263385 - LTR23 LTR ERV1 -131 336 1 942 167 29 0 chr2 20424469 20424643 -230263211 + Tigger1 DNA MER2_type 2240 2418 0 566 189 68 74 chr2 20424648 20424838 -230263016 - MSTB2 LTR MaLR -57 400 212 1118 230 60 0 chr2 20424863 20425115 -230262739 - LTR39 LTR ERV1 0 783 517 2143 150 142 0 chr2 20425122 20425523 -230262331 + MER66B LTR ERV1 27 484 -2 2551 181 17 25 chr2 20425524 20426049 -230261805 - LTR39 LTR ERV1 -262 521 1 740 159 34 10 chr2 20426049 20426212 -230261642 - MSTB2 LTR MaLR -270 156 1 273 273 0 11 chr2 20426226 20426314 -230261540 + MLT1I LTR MaLR 323 409 0 2002 158 54 31 chr2 20426408 20426795 -230261059 - MSTC LTR MaLR 0 428 33 259 68 0 0 chr2 20426795 20426839 -230261015 + L1MA3 LINE L1 6262 6305 0 1795 186 34 44 chr2 20426879 20427315 -230260539 + MSTB1 LTR MaLR 1 432 0 308 111 0 19 chr2 20427361 20427415 -230260439 - MSTC LTR MaLR 0 428 376 718 152 0 146 chr2 20427451 20427580 -230260274 - AluJo SINE Alu -84 228 126 351 0 0 0 chr2 20427580 20427619 -230260235 + (CA)n Simple_repeat Simple_repeat 2 40 0 718 152 0 146 chr2 20427619 20427653 -230260201 - AluJo SINE Alu -186 126 89 566 132 0 115 chr2 20427672 20427711 -230260143 - MSTC LTR MaLR -36 392 350 2091 82 21 14 chr2 20427711 20428022 -230259832 + AluY SINE Alu 1 313 0 566 132 0 115 chr2 20428022 20428208 -230259646 - MSTC LTR MaLR -78 350 89 197 300 186 7 chr2 20428433 20428573 -230259281 - L2 LINE L2 -6 3307 3143 1136 217 112 42 chr2 20428618 20429139 -230258715 - MLT1F1 LTR MaLR 0 567 1 1399 212 10 10 chr2 20429431 20429723 -230258131 - AluJb SINE Alu -18 294 3 779 147 7 7 chr2 20429724 20429860 -230257994 - AluJb SINE Alu -176 136 1 1783 135 87 34 chr2 20430070 20430256 -230257598 + THE1C LTR MaLR 1 176 -199 243 0 0 0 chr2 20430256 20430283 -230257571 + (TC)n Simple_repeat Simple_repeat 1 27 0 1783 135 87 34 chr2 20430283 20430452 -230257402 + THE1C LTR MaLR 176 375 0 1550 191 62 0 chr2 20430652 20430925 -230256929 - AluJo SINE Alu -22 290 1 306 243 45 9 chr2 20431266 20431377 -230256477 + MLT1K LTR MaLR 466 580 -8 22 35 0 0 chr2 20432835 20432864 -230254990 + AT_rich Low_complexity Low_complexity 1 29 0 232 222 19 0 chr2 20433153 20433207 -230254647 + (TA)n Simple_repeat Simple_repeat 2 56 0 1136 197 13 21 chr2 20433669 20433903 -230253951 + MLT1D LTR MaLR 1 232 -273 774 182 28 93 chr2 20433908 20434122 -230253732 + MLT1D LTR MaLR 206 405 -100 1099 94 0 0 chr2 20434125 20434285 -230253569 + AluY SINE Alu 145 304 -7 556 139 9 37 chr2 20434286 20434394 -230253460 + MLT1D LTR MaLR 399 503 -2 23 68 0 0 chr2 20434696 20434740 -230253114 + AT_rich Low_complexity Low_complexity 1 44 0 961 139 12 0 chr2 20434798 20434971 -230252883 + C-rich Low_complexity Low_complexity 4 178 0 255 61 0 0 chr2 20434971 20435004 -230252850 + (TTCC)n Simple_repeat Simple_repeat 3 35 0 520 199 42 12 chr2 20435831 20435997 -230251857 - L1MC5 LINE L1 -176 7785 7615 1397 203 75 7 chr2 20436486 20436767 -230251087 - AluJo SINE Alu -9 303 4 408 267 112 43 chr2 20437247 20437434 -230250420 - L1 LINE L1 -2368 3778 3579 2118 107 28 14 chr2 20437665 20437954 -230249900 - AluSc SINE Alu -16 293 1 745 272 18 9 chr2 20438442 20438659 -230249195 + MLT1I LTR MaLR 174 392 -17 24 53 0 0 chr2 20438835 20438873 -230248981 + AT_rich Low_complexity Low_complexity 1 38 0 3255 186 17 0 chr2 20439170 20439832 -230248022 + L1PB4 LINE L1 5482 6154 -2 296 109 0 0 chr2 20439855 20439901 -230247953 + L1MA3 LINE L1 5395 5440 -865 5655 106 8 17 chr2 20439936 20440820 -230247034 + L1MA3 LINE L1 5428 6303 -2 31 26 0 0 chr2 20440828 20440866 -230246988 + AT_rich Low_complexity Low_complexity 1 38 0 282 56 0 0 chr2 20442090 20442126 -230245728 + (TG)n Simple_repeat Simple_repeat 2 37 0 257 346 37 22 chr2 20442317 20442453 -230245401 + L2 LINE L2 2709 2846 -468 645 268 94 75 chr2 20442703 20443180 -230244674 + MLT1J LTR MaLR 26 511 0 1706 181 0 30 chr2 20443221 20443520 -230244334 - AluJb SINE Alu -18 294 5 338 132 0 19 chr2 20444269 20444322 -230243532 - MIR3 SINE MIR -30 178 127 24 0 0 0 chr2 20444388 20444412 -230243442 + AT_rich Low_complexity Low_complexity 1 24 0 227 231 77 0 chr2 20445522 20445587 -230242267 + LTR37A LTR ERV1 149 218 -208 1743 148 0 0 chr2 20446485 20446735 -230241119 + AluSq SINE Alu 1 250 -63 185 236 9 132 chr2 20446896 20447002 -230240852 - MIR SINE MIR -70 192 100 1665 186 30 19 chr2 20448272 20448637 -230239217 + MLT2D LTR ERVL 1 369 -45 1864 202 3 0 chr2 20448638 20449000 -230238854 + MER47A DNA MER2_type 2 364 -2 255 109 73 36 chr2 20449038 20449093 -230238761 + MLT2D LTR ERVL 464 520 0 1624 278 48 33 chr2 20449108 20449549 -230238305 - MLT1G1 LTR MaLR -2 593 160 2278 101 3 0 chr2 20449549 20449846 -230238008 - AluSx SINE Alu -14 298 1 1624 278 48 33 chr2 20449846 20449877 -230237977 - MLT1G1 LTR MaLR -435 160 131 497 205 180 12 chr2 20449877 20450038 -230237816 - MER53 DNA DNA 0 189 2 1624 278 48 33 chr2 20450038 20450144 -230237710 - MLT1G1 LTR MaLR -464 131 5 325 264 50 99 chr2 20450323 20450505 -230237349 - MLT1G1-int LTR MaLR -171 1200 1028 1515 150 124 4 chr2 20450938 20451204 -230236650 + AluJb SINE Alu 1 298 -14 1118 208 64 0 chr2 20451204 20451454 -230236400 + MER58B DNA MER1_type 76 341 0 769 220 55 48 chr2 20452014 20452318 -230235536 - MLT1C LTR MaLR -12 441 151 381 167 14 0 chr2 20452318 20452390 -230235464 + AluS SINE Alu 1 73 -230 788 157 15 82 chr2 20452509 20452777 -230235077 + L1MB8 LINE L1 5909 6158 -20 1901 162 0 3 chr2 20452777 20453086 -230234768 - AluSx SINE Alu -4 308 1 398 158 24 25 chr2 20453163 20453256 -230234598 - L1MB7 LINE L1 -122 6058 5959 * 5407 224 60 27 chr2 20453244 20455126 -230232728 - L1M4 LINE L1 -961 5421 3479 1584 221 71 30 chr2 20455126 20455728 -230232126 - L1M4 LINE L1 -3180 3202 2576 1387 215 6 0 chr2 20455801 20456136 -230231718 - L1 LINE L1 -1545 4601 4265 4695 157 56 10 chr2 20456137 20457480 -230230374 + L1PA16 LINE L1 4718 6156 -10 674 230 81 90 chr2 20457501 20457802 -230230052 - L1M4 LINE L1 -3910 2474 2179 1969 119 36 4 chr2 20457802 20458080 -230229774 - AluSx SINE Alu 0 312 26 674 230 81 90 chr2 20458080 20458335 -230229519 - L1M4 LINE L1 -4205 2179 1923 360 96 0 0 chr2 20458469 20458521 -230229333 + AluSg/x SINE Alu 215 266 -34 * 531 183 58 67 chr2 20458520 20458711 -230229143 - MLT1C LTR MaLR -300 205 7 649 272 55 1 chr2 20458729 20458963 -230228891 + MLT1G LTR MaLR 10 265 -290 688 216 115 32 chr2 20459071 20459349 -230228505 + MER33 DNA MER1_type 23 323 -1 255 284 0 0 chr2 20459621 20459694 -230228160 + MIR SINE MIR 47 119 -89 32 91 0 0 chr2 20459836 20459924 -230227930 + AT_rich Low_complexity Low_complexity 1 88 0 288 186 0 0 chr2 20459998 20460057 -230227797 + (TG)n Simple_repeat Simple_repeat 2 60 0 873 195 78 10 chr2 20461408 20461613 -230226241 + MER20 DNA MER1_type 1 219 0 618 210 0 29 chr2 20461629 20461767 -230226087 - FLAM_A SINE Alu -8 134 1 352 304 204 4 chr2 20464879 20465139 -230222715 - L2 LINE L2 -852 2462 2151 285 136 17 68 chr2 20465207 20465266 -230222588 + L2 LINE L2 3217 3272 0 220 349 113 33 chr2 20465931 20466143 -230221711 - L2 LINE L2 -191 3081 2853 21 57 0 0 chr2 20466381 20466416 -230221438 + AT_rich Low_complexity Low_complexity 1 35 0 263 361 23 15 chr2 20466505 20466635 -230221219 + MIR SINE MIR 19 149 -59 23 54 0 0 chr2 20468629 20468666 -230219188 + AT_rich Low_complexity Low_complexity 1 37 0 395 190 64 2 chr2 20468666 20468783 -230219071 - L1MA9 LINE L1 -7 6290 6166 2011 234 55 22 chr2 20469027 20469665 -230218189 + L1MC4 LINE L1 5254 5912 -1896 229 197 0 42 chr2 20469709 20469780 -230218074 + L1MC4 LINE L1 5894 5961 -1847 6098 156 23 6 chr2 20469918 20471808 -230216046 + L1PA15 LINE L1 4022 5945 -220 3046 267 82 18 chr2 20471934 20473317 -230214537 + L1MC4 LINE L1 6461 7931 -111 1678 182 54 99 chr2 20473359 20473487 -230214367 + MLT1C LTR MaLR 6 138 -329 1783 150 22 32 chr2 20473487 20473800 -230214054 - AluJb SINE Alu -2 310 1 1678 182 54 99 chr2 20473800 20474155 -230213699 + MLT1C LTR MaLR 138 467 0 295 135 14 94 chr2 20474170 20474265 -230213589 + L1MC4 LINE L1 7905 8041 -1 1035 129 20 0 chr2 20474341 20474488 -230213366 - AluSg SINE Alu -160 150 1 358 263 25 0 chr2 20474491 20474571 -230213283 - MER58B DNA MER1_type -259 82 1 411 186 17 8 chr2 20475100 20475218 -230212636 + (TA)n Simple_repeat Simple_repeat 1 119 0 4306 188 14 8 chr2 20475235 20476274 -230211580 - L1MB4 LINE L1 -18 6162 5111 333 0 0 0 chr2 20476987 20477024 -230210830 + (TG)n Simple_repeat Simple_repeat 1 37 0 365 256 194 8 chr2 20477824 20477953 -230209901 - MER5A DNA MER1_type -7 182 30 676 103 0 0 chr2 20478167 20478264 -230209590 + L1P LINE L1 2 98 -6048 * 1063 83 0 0 chr2 20478262 20478407 -230209447 + L1P LINE L1 623 767 -5379 * 28483 49 3 1 chr2 20478403 20482099 -230205755 - L1P LINE L1 -2442 3704 4 21 89 0 0 chr2 20482136 20482192 -230205662 + AT_rich Low_complexity Low_complexity 1 56 0 1964 144 3 31 chr2 20484567 20484991 -230202863 + L1MA1 LINE L1 5933 6345 0 314 243 10 29 chr2 20485210 20485304 -230202550 - MLT1I LTR MaLR 0 409 318 5879 168 217 26 chr2 20485304 20486749 -230201105 - MER52A LTR ERV1 0 1755 36 193 262 98 16 chr2 20487399 20487460 -230200394 + MIR SINE MIR 3 68 -194 2088 168 14 11 chr2 20487632 20487996 -230199858 + MLT1A1 LTR MaLR 1 365 0 219 297 16 0 chr2 20488943 20489007 -230198847 + (TAA)n Simple_repeat Simple_repeat 2 66 0 611 129 9 35 chr2 20489955 20490071 -230197783 - L1MB3 LINE L1 -10 6173 6061 303 357 119 16 chr2 20490077 20490396 -230197458 + L2 LINE L2 1837 2188 -1126 1825 129 63 33 chr2 20490894 20490948 -230196906 + THE1C LTR MaLR 1 52 -323 2095 117 63 26 chr2 20490948 20491299 -230196555 + THE1B LTR MaLR 1 364 0 1825 129 63 33 chr2 20491299 20491608 -230196246 + THE1C LTR MaLR 52 375 0 409 361 164 19 chr2 20492046 20492315 -230195539 + L2 LINE L2 2961 3268 -4 498 33 0 0 chr2 20492426 20492486 -230195368 + (TG)n Simple_repeat Simple_repeat 1 60 0 2474 143 30 7 chr2 20493482 20493910 -230193944 - L1PA16 LINE L1 0 6166 5729 2250 217 23 0 chr2 20493917 20494479 -230193375 + L1P LINE L1 4662 5236 -910 606 263 29 34 chr2 20494534 20494709 -230193145 + L2 LINE L2 2581 2754 -560 274 233 67 0 chr2 20494701 20494761 -230193093 - L2 LINE L2 0 3313 3250 * 245 314 41 8 chr2 20494848 20494969 -230192885 - L2 LINE L2 -276 3037 2913 476 157 231 0 chr2 20494971 20495092 -230192762 - L1MB7 LINE L1 -16 6168 6020 1419 144 0 26 chr2 20495092 20495213 -230192641 + L1MB8 LINE L1 5708 5831 -347 2442 34 41 0 chr2 20495213 20495506 -230192348 + AluY SINE Alu 1 305 -6 1419 144 0 26 chr2 20495506 20495648 -230192206 + L1MB8 LINE L1 5831 5964 -214 318 263 40 20 chr2 20695661 20695760 -229992094 - MLT1D LTR MaLR -168 337 237 320 182 0 0 chr2 20697250 20697305 -229990549 - MER112 DNA MER1_type -196 64 10 190 344 25 38 chr2 20701646 20701803 -229986051 + MIR3 SINE MIR 54 208 0 2198 122 0 0 chr2 20702130 20702425 -229985429 + AluSx SINE Alu 1 295 -17 1320 259 7 46 chr2 20703458 20703918 -229983936 + L2 LINE L2 2219 2660 -654 1111 167 5 56 chr2 20703924 20704140 -229983714 + MER20 DNA MER1_type 1 205 -14 1431 130 17 30 chr2 20704184 20704439 -229983415 - AluJo SINE Alu 0 312 68 440 331 65 24 chr2 20704439 20704949 -229982905 + L2 LINE L2 2699 3230 -83 2885 13 0 0 chr2 20705950 20706261 -229981593 + AluYa5 SINE Alu 1 311 0 184 162 27 0 chr2 20706267 20706310 -229981544 + MIR SINE MIR 98 142 -66 593 261 26 0 chr2 20707202 20707355 -229980499 + MIR SINE MIR 42 198 -64 2091 149 3 0 chr2 20708763 20709072 -229978782 + AluSx SINE Alu 1 310 -2 1238 243 168 29 chr2 20709318 20709729 -229978125 - MLT1H LTR MaLR -45 504 1 205 397 71 8 chr2 20711220 20711346 -229976508 - L2 LINE L2 -51 3221 3088 9324 33 0 0 chr2 20713164 20714249 -229973605 - L1P LINE L1 -1035 5111 4026 3382 34 5 5 chr2 20714249 20714657 -229973197 + L1PA5 LINE L1 5746 6153 -1 789 210 132 0 chr2 20714720 20714887 -229972967 + MER20 DNA MER1_type 1 189 -30 530 109 11 0 chr2 20715830 20715922 -229971932 + (TGGA)n Simple_repeat Simple_repeat 1 93 0 278 285 81 29 chr2 20718172 20718344 -229969510 + L2 LINE L2 2910 3090 -182 252 275 114 8 chr2 20718570 20718701 -229969153 + L1ME4a LINE L1 5782 5926 -195 430 226 20 20 chr2 20719014 20719116 -229968738 - MER96 DNA MER1_type? -11 164 63 262 236 31 39 chr2 20719587 20719714 -229968140 + L1 LINE L1 4733 4858 -1288 207 0 0 0 chr2 20719923 20719946 -229967908 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 324 0 0 0 chr2 20719945 20719981 -229967873 + (GA)n Simple_repeat Simple_repeat 2 37 0 1285 153 81 0 chr2 20719984 20720193 -229967661 - MLT1B LTR MaLR 0 390 165 2164 123 3 0 chr2 20720212 20720513 -229967341 + AluSc SINE Alu 8 309 0 3820 104 2 11 chr2 20720736 20721282 -229966572 + L1PA13 LINE L1 5612 6152 -11 620 309 64 14 chr2 20721288 20721570 -229966284 - L2 LINE L2 -528 2786 2491 883 290 107 0 chr2 20721603 20721913 -229965941 + L2 LINE L2 149 491 -2823 311 89 44 0 chr2 20723033 20723078 -229964776 - MADE1 DNA Mariner -2 78 32 1757 188 79 3 chr2 20723181 20723521 -229964333 - MLT2C2 LTR ERVL -98 366 1 2616 242 76 24 chr2 20723621 20725076 -229962778 + L1ME2 LINE L1 4622 6164 0 307 264 121 34 chr2 20725172 20725411 -229962443 + L1ME3A LINE L1 4561 4820 -1326 1794 246 128 19 chr2 20725729 20726261 -229961593 - MLT1G1 LTR MaLR -5 590 1 708 299 64 36 chr2 20726267 20727051 -229960803 + L1ME3A LINE L1 5153 5957 -213 359 318 27 0 chr2 20727407 20727517 -229960337 - MIR SINE MIR -63 145 33 374 229 40 25 chr2 20728438 20728590 -229959264 + MIR SINE MIR 42 193 -66 254 267 69 26 chr2 20729950 20730066 -229957788 - L2 LINE L2 -9 3263 3143 317 331 163 11 chr2 20730177 20730545 -229957309 - L2 LINE L2 -433 2881 2458 31 0 0 0 chr2 20731044 20731075 -229956779 + AT_rich Low_complexity Low_complexity 1 31 0 347 311 39 0 chr2 20731687 20731790 -229956064 + MER91C DNA MER1_type 1 107 -33 696 219 55 6 chr2 20732578 20732742 -229955112 + MER5A DNA MER1_type 18 189 0 546 76 22 11 chr2 20732805 20732897 -229954957 + MIR SINE MIR 104 196 -66 7468 133 25 44 chr2 20733193 20734460 -229953394 + THE1-int LTR MaLR 264 1505 -75 21 36 0 0 chr2 20736063 20736091 -229951763 + AT_rich Low_complexity Low_complexity 1 28 0 366 258 53 15 chr2 20736091 20736223 -229951631 - MIR SINE MIR -57 205 69 429 307 76 13 chr2 20736696 20736921 -229950933 + MIR SINE MIR 17 255 -7 2389 89 3 3 chr2 20736930 20737232 -229950622 - AluSg SINE Alu -8 302 1 257 277 71 9 chr2 20737563 20737675 -229950179 - MER112 DNA MER1_type -42 218 100 289 304 56 25 chr2 20737799 20737960 -229949894 - L2 LINE L2 -897 2417 2252 228 319 72 22 chr2 20738090 20738228 -229949626 - L2 LINE L2 -212 3060 2916 2241 99 3 48 chr2 20739146 20739459 -229948395 + AluSp SINE Alu 1 299 -14 1302 282 87 2 chr2 20739807 20740232 -229947622 - LTR40c LTR ERVL -4 461 1 216 143 0 0 chr2 20741197 20741239 -229946615 + (T)n Simple_repeat Simple_repeat 1 42 0 239 291 0 68 chr2 20741828 20741976 -229945878 + L2 LINE L2 2920 3057 -215 1475 40 0 0 chr2 20742847 20743020 -229944834 - AluY SINE Alu -2 309 137 211 311 0 0 chr2 20744410 20744471 -229943383 - MIR SINE MIR -65 143 83 417 328 119 42 chr2 20745091 20745451 -229942403 - L2 LINE L2 -52 3220 2833 2359 30 0 0 chr2 20747068 20747332 -229940522 + AluY SINE Alu 31 294 -17 239 190 127 13 chr2 20747591 20747670 -229940184 - MIR3 SINE MIR -15 193 106 254 307 52 33 chr2 20748833 20748986 -229938868 - L3 LINE CR1 -2 1575 1420 654 271 99 13 chr2 20749072 20749181 -229938673 + L1MD2 LINE L1 6019 6117 -242 378 0 0 0 chr2 20749181 20749223 -229938631 + (CA)n Simple_repeat Simple_repeat 2 43 0 654 271 99 13 chr2 20749223 20749415 -229938439 + L1MD2 LINE L1 6117 6346 -13 1086 224 8 8 chr2 20749422 20749659 -229938195 - MIR SINE MIR -3 259 23 277 274 27 0 chr2 20749819 20749892 -229937962 - MIR SINE MIR -70 192 118 630 144 0 42 chr2 20750738 20750856 -229936998 + MLT1A1 LTR MaLR 1 113 -252 458 311 128 32 chr2 20751089 20751308 -229936546 + MIR SINE MIR 17 256 -6 351 356 111 6 chr2 20751822 20752002 -229935852 + MIR SINE MIR 46 244 -18 213 324 62 41 chr2 20752263 20752408 -229935446 + MIR SINE MIR 60 207 -55 501 244 8 0 chr2 20752671 20752802 -229935052 - L1MD2 LINE L1 -19 6340 6209 304 341 118 14 chr2 20753037 20753257 -229934597 + L1MC4a LINE L1 5569 5811 -1997 1219 231 37 27 chr2 20753259 20753635 -229934219 + L1MA9 LINE L1 5896 6275 -37 269 252 107 0 chr2 20753657 20753760 -229934094 + L1MC4a LINE L1 5811 5924 -1884 421 251 150 43 chr2 20754101 20754308 -229933546 - MIR SINE MIR 0 262 34 2530 49 0 10 chr2 20755403 20755709 -229932145 - AluY SINE Alu -8 303 1 39 60 0 0 chr2 20756117 20756184 -229931670 + AT_rich Low_complexity Low_complexity 1 67 0 613 262 47 31 chr2 20756376 20756589 -229931265 + MLT1J2 LTR MaLR 192 473 -38 1191 254 86 26 chr2 20757905 20758544 -229929310 + L2 LINE L2 2631 3313 0 338 267 24 15 chr2 20759359 20759495 -229928359 - L1MC4 LINE L1 -1311 7011 1983 21 0 0 0 chr2 20759506 20759527 -229928327 + AT_rich Low_complexity Low_complexity 1 21 0 406 276 67 22 chr2 20759546 20759680 -229928174 - MIR3 SINE MIR -66 142 3 1881 245 103 45 chr2 20760552 20762078 -229925776 + L1MEc LINE L1 1281 2860 -3355 238 204 0 0 chr2 20763211 20763255 -229924599 + GA-rich Low_complexity Low_complexity 1 44 0 4027 156 33 4 chr2 20763345 20764109 -229923745 - L1MA4 LINE L1 -1 6299 5514 470 335 166 24 chr2 20764131 20764552 -229923302 + L2 LINE L2 2828 3308 -5 869 219 28 0 chr2 20764970 20765148 -229922706 + LTR40c LTR ERVL 44 226 -239 2493 221 37 44 chr2 20765154 20765710 -229922144 + MER45B DNA AcHobo 1 553 -487 2357 102 0 6 chr2 20765710 20766023 -229921831 - AluSq SINE Alu -2 311 1 2493 221 37 44 chr2 20766023 20766119 -229921735 + MER45B DNA AcHobo 553 648 -392 42222 38 0 2 chr2 20766125 20772316 -229915538 + L1PA3 LINE L1 1 6183 0 238 174 0 0 chr2 20772347 20772393 -229915461 + MER45B DNA AcHobo 647 692 -348 * 368 218 99 0 chr2 20772387 20772488 -229915366 + MER45B DNA AcHobo 930 1040 0 1023 243 4 9 chr2 20772499 20772725 -229915129 + LTR40b LTR ERVL 223 447 -15 2290 138 11 16 chr2 20773333 20773710 -229914144 + THE1C LTR MaLR 1 375 0 1297 136 5 0 chr2 20774638 20774858 -229912996 + L1MA6 LINE L1 6080 6300 0 478 262 9 0 chr2 20776099 20776206 -229911648 - MER81 DNA DNA -2 112 5 3006 258 36 25 chr2 20776889 20777040 -229910814 - L1M4 LINE L1 -2429 3717 3569 1885 175 7 0 chr2 20777040 20777348 -229910506 - AluSx SINE Alu -2 310 1 3006 258 36 25 chr2 20777348 20778461 -229909393 - L1M4 LINE L1 -2577 3569 2439 244 224 13 0 chr2 20778462 20778538 -229909316 + L1M4 LINE L1 2580 2656 -3490 360 296 83 28 chr2 20778589 20778805 -229909049 + L1ME3A LINE L1 5688 5915 -255 1829 258 55 20 chr2 20778973 20780043 -229907811 + L1MEc LINE L1 2041 3102 -3113 445 187 24 8 chr2 20780057 20780180 -229907674 + L1MEc LINE L1 3238 3362 -2853 199 261 138 0 chr2 20783746 20783811 -229904043 + L2 LINE L2 3182 3255 -58 243 236 18 0 chr2 20784194 20784249 -229903605 + (TA)n Simple_repeat Simple_repeat 2 57 0 216 0 0 0 chr2 20784618 20784642 -229903212 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 594 212 7 55 chr2 20786205 20786351 -229901503 + MLT1A2 LTR MaLR 236 374 0 180 423 0 0 chr2 20786592 20786689 -229901165 - L2 LINE L2 -8 3264 3168 292 288 189 7 chr2 20787746 20787899 -229899955 - MIR SINE MIR -2 260 80 897 257 70 80 chr2 20792746 20793220 -229894634 + L2 LINE L2 2827 3295 -18 349 309 83 31 chr2 20793461 20793918 -229893936 - L1M4 LINE L1 -1494 4652 4172 2130 92 0 3 chr2 20794798 20795109 -229892745 + AluY SINE Alu 1 310 0 886 211 11 5 chr2 20795289 20795474 -229892380 + MER5A DNA MER1_type 3 188 -1 454 189 154 0 chr2 20795851 20796020 -229891834 - MER20B DNA MER1_type -64 719 525 1721 264 12 0 chr2 20796071 20796492 -229891362 - MER20B DNA MER1_type -348 435 10 2205 151 70 7 chr2 20796614 20797017 -229890837 + MSTA LTR MaLR 1 428 0 1027 291 105 42 chr2 20798804 20799604 -229888250 - L1ME4a LINE L1 -2 6119 5270 191 265 0 0 chr2 20799660 20799709 -229888145 + L2 LINE L2 3265 3313 0 243 323 67 32 chr2 20800021 20800291 -229887563 - L1ME4a LINE L1 -1311 4835 4551 540 282 165 48 chr2 20801444 20801838 -229886016 - L2 LINE L2 -62 3251 2812 4595 183 0 24 chr2 20801872 20802308 -229885546 + L1P4 LINE L1 4433 4878 -1283 3870 28 2 0 chr2 20802308 20802768 -229885086 + L1PA4 LINE L1 5710 6180 0 4595 183 0 24 chr2 20802768 20803389 -229884465 + L1P4 LINE L1 4878 5464 -697 335 259 0 0 chr2 20803546 20803627 -229884227 - MER112 DNA MER1_type -177 83 3 224 220 0 102 chr2 20804705 20804764 -229883090 - MIR SINE MIR -117 145 93 702 175 6 11 chr2 20805624 20805736 -229882118 + (CA)n Simple_repeat Simple_repeat 1 113 -63 1938 199 15 0 chr2 20805736 20806077 -229881777 - MER7A DNA MER2_type 0 346 3 702 175 6 11 chr2 20806077 20806141 -229881713 + (CA)n Simple_repeat Simple_repeat 113 176 0 182 358 28 57 chr2 20807029 20807205 -229880649 + MIR SINE MIR 77 247 -15 182 215 62 92 chr2 20807844 20807909 -229879945 - MER5A DNA MER1_type -40 149 87 2216 128 0 10 chr2 20808098 20808411 -229879443 + AluSx SINE Alu 3 312 0 382 292 59 61 chr2 20809136 20809319 -229878535 + MIR3 SINE MIR 6 187 -59 201 349 0 0 chr2 20810394 20810460 -229877394 - L2 LINE L2 0 3313 3248 227 304 0 0 chr2 20811337 20811406 -229876448 + (CA)n Simple_repeat Simple_repeat 1 69 0 264 122 0 0 chr2 20812527 20812568 -229875286 + (CAT)n Simple_repeat Simple_repeat 3 43 0 2201 118 0 28 chr2 20814462 20814783 -229873071 - AluSx SINE Alu 0 312 1 357 296 15 61 chr2 20815633 20815765 -229872089 + MIR SINE MIR 20 145 -63 438 230 75 68 chr2 20816168 20816329 -229871525 - MER63A DNA MER1_type -37 173 12 335 342 32 21 chr2 20817979 20818166 -229869688 + MER5A DNA MER1_type 1 189 0 491 313 0 8 chr2 20819277 20819411 -229868443 - MIR3 SINE MIR -67 141 9 529 260 93 58 chr2 20819673 20819931 -229867923 - LTR16A LTR ERVL -165 285 19 1756 62 0 0 chr2 20820611 20820841 -229867013 + AluY SINE Alu 82 311 0 626 118 10 0 chr2 20821276 20821378 -229866476 + (GGAGA)n Simple_repeat Simple_repeat 1 103 0 21 0 0 0 chr2 20821627 20821648 -229866206 + AT_rich Low_complexity Low_complexity 1 21 0 21612 33 0 13 chr2 20822156 20825062 -229862792 + L1PA3 LINE L1 2918 5816 -339 1963 23 0 0 chr2 20825062 20825278 -229862576 + AluYb8 SINE Alu 100 315 -3 21612 33 0 13 chr2 20825278 20825612 -229862242 + L1PA3 LINE L1 5816 6153 -2 31 0 0 0 chr2 20825612 20825643 -229862211 + AT_rich Low_complexity Low_complexity 1 31 0 2426 122 125 10 chr2 20825742 20826126 -229861728 + MSTA LTR MaLR 1 428 0 256 253 32 118 chr2 20826300 20826486 -229861368 - L2 LINE L2 -218 3054 2885 219 278 40 116 chr2 20826700 20826873 -229860981 - L2 LINE L2 -1114 2200 2041 21 0 0 0 chr2 20826959 20826980 -229860874 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr2 20827051 20827093 -229860761 + AT_rich Low_complexity Low_complexity 1 42 0 407 337 112 6 chr2 20827360 20827538 -229860316 + LTR67 LTR ERVL 38 234 -323 365 98 0 0 chr2 20827938 20827989 -229859865 + Alu SINE Alu 1 51 -251 513 0 0 0 chr2 20827990 20828047 -229859807 + (TA)n Simple_repeat Simple_repeat 2 58 0 1084 327 95 42 chr2 20828646 20829643 -229858211 + ERVL LTR ERVL 881 1930 -3834 1308 97 0 0 chr2 20829887 20830052 -229857802 - AluSp SINE Alu -13 300 136 1250 339 83 24 chr2 20830053 20830835 -229857019 + ERVL LTR ERVL 2170 2997 -2657 251 329 12 0 chr2 20830845 20830930 -229856924 + ERVL LTR ERVL 3590 3675 -2089 2907 306 56 38 chr2 20831018 20832510 -229855344 + ERVL LTR ERVL 3906 5425 -339 180 0 0 0 chr2 20832949 20832969 -229854885 + (T)n Simple_repeat Simple_repeat 1 20 0 318 250 0 23 chr2 20833143 20833231 -229854623 + LTR67 LTR ERVL 458 543 -14 1585 274 89 2 chr2 20833234 20833704 -229854150 - LTR33 LTR ERVL -10 511 1 339 308 58 19 chr2 20834053 20834209 -229853645 + L2 LINE L2 2445 2606 -708 560 285 31 35 chr2 20834256 20834484 -229853370 + L2 LINE L2 3087 3313 0 388 200 24 12 chr2 20835127 20835211 -229852643 - MER44D DNA MER2_type -2 603 519 1209 165 5 0 chr2 20835211 20835399 -229852455 + MER2 DNA MER2_type 1 189 -156 30 59 0 0 chr2 20835462 20835513 -229852341 + AT_rich Low_complexity Low_complexity 1 51 0 1424 136 82 29 chr2 20835576 20835819 -229852035 - MER44D DNA MER2_type -83 526 1 1430 286 129 24 chr2 20837422 20838362 -229849492 - L2 LINE L2 -33 3280 2241 1049 215 33 0 chr2 20838572 20838786 -229849068 + AluJo SINE Alu 90 310 -2 25 65 0 0 chr2 20839010 20839056 -229848798 + AT_rich Low_complexity Low_complexity 1 46 0 217 367 100 0 chr2 20839431 20839521 -229848333 - L2 LINE L2 -11 3261 3163 1127 260 82 9 chr2 20839670 20839985 -229847869 - MLT-int LTR MaLR -894 841 504 1028 245 58 4 chr2 20839986 20840243 -229847611 + MST-int LTR MaLR 800 1070 -581 3375 142 110 0 chr2 20840244 20840842 -229847012 + LTR51 LTR ERV1 8 671 0 951 234 62 8 chr2 20840860 20841117 -229846737 + LTR56 LTR ERV1 175 445 0 923 200 6 6 chr2 20841139 20841314 -229846540 + MSTD-int LTR MaLR 1406 1580 -155 881 238 134 55 chr2 20841322 20841687 -229846167 + MSTD LTR MaLR 3 396 0 2859 151 64 58 chr2 20841688 20842297 -229845557 - L1MA9 LINE L1 -384 5928 5316 293 122 0 0 chr2 20842387 20842436 -229845418 - MER3 DNA MER1_type -19 190 142 4206 177 8 2 chr2 20842451 20843395 -229844459 + L1PB1 LINE L1 4488 5437 -714 3131 86 0 2 chr2 20843391 20843799 -229844055 + L1PB1 LINE L1 5672 6078 -73 * 385 237 58 32 chr2 20843799 20843955 -229843899 - MER3 DNA MER1_type -44 165 6 369 235 196 40 chr2 20843960 20844297 -229843557 + L1ME LINE L1 5259 5648 -514 675 265 105 32 chr2 20844358 20844701 -229843153 + L1ME3A LINE L1 4730 5097 -1049 537 250 73 28 chr2 20844735 20844983 -229842871 + L1MC4a LINE L1 987 1245 -4874 415 275 99 6 chr2 20845222 20845404 -229842450 + L1MC4 LINE L1 7720 7918 -124 350 185 12 0 chr2 20845404 20845485 -229842369 + (TA)n Simple_repeat Simple_repeat 1 82 0 290 206 186 0 chr2 20845529 20845626 -229842228 + L1MC4 LINE L1 7926 8040 -2 766 270 78 55 chr2 20845634 20846136 -229841718 + L1ME3A LINE L1 5434 5949 -213 484 325 52 16 chr2 20846303 20846731 -229841123 + L1MC4a LINE L1 3781 4235 -1894 306 294 102 53 chr2 20846735 20847184 -229840670 + L1MC4a LINE L1 5475 5945 -159 23 54 0 0 chr2 20847867 20847904 -229839950 + AT_rich Low_complexity Low_complexity 1 37 0 1019 243 78 28 chr2 20848227 20848614 -229839240 + L1MB7 LINE L1 5684 6089 -95 882 260 91 33 chr2 20848605 20848966 -229838888 + L1M4 LINE L1 3465 3846 -2300 * 344 300 35 117 chr2 20849477 20849880 -229837974 - L1M2 LINE L1 -5596 1253 884 2527 99 8 11 chr2 20849957 20850320 -229837534 + THE1B LTR MaLR 1 362 -2 326 257 267 0 chr2 20850470 20850571 -229837283 + MER52A LTR ERV1 46 173 -1582 * 5818 170 26 126 chr2 20850557 20852036 -229835818 + MER52A LTR ERV1 425 1755 0 2311 103 3 0 chr2 20852452 20852753 -229835101 + AluSp SINE Alu 1 302 -11 547 355 27 37 chr2 20852897 20853378 -229834476 + ERVL LTR ERVL 4728 5203 -561 282 333 119 6 chr2 20853830 20853989 -229833865 + LTR16C LTR ERVL 305 481 -10 402 229 166 36 chr2 20854018 20854241 -229833613 + L1ME3A LINE L1 5618 5869 -301 3640 202 71 11 chr2 20854824 20855166 -229832688 - L1MB7 LINE L1 0 6184 5864 7213 133 42 24 chr2 20855166 20855663 -229832191 - HSMAR2 DNA Mariner 0 1302 815 180 0 0 0 chr2 20855663 20855683 -229832171 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 7213 133 42 24 chr2 20855683 20856461 -229831393 - HSMAR2 DNA Mariner -487 815 4 3640 202 71 11 chr2 20856461 20857172 -229830682 - L1MB7 LINE L1 -320 5864 5073 188 75 0 50 chr2 20857419 20857459 -229830395 + (CAAAAA)n Simple_repeat Simple_repeat 3 40 0 612 303 122 36 chr2 20857487 20858046 -229829808 + L1MEd LINE L1 501 1133 -4986 180 0 0 0 chr2 20858046 20858066 -229829788 + (TAA)n Simple_repeat Simple_repeat 3 22 0 612 303 122 36 chr2 20858066 20858203 -229829651 + L1MEd LINE L1 1133 1257 -4862 291 348 28 0 chr2 20858330 20858471 -229829383 + HAL1 LINE L1 1502 1646 -861 272 264 0 0 chr2 20858474 20858546 -229829308 + MLT2F LTR ERVL 2 73 -590 193 327 209 0 chr2 20858728 20858838 -229829016 + L2 LINE L2 3137 3269 -3 21 0 0 0 chr2 20859125 20859146 -229828708 + AT_rich Low_complexity Low_complexity 1 21 0 9152 130 15 6 chr2 20859252 20860723 -229827131 - L1PA10 LINE L1 -959 5187 3704 6338 81 9 19 chr2 20860727 20860920 -229826934 + L1PA10 LINE L1 5176 5369 -799 2281 63 0 70 chr2 20860920 20861236 -229826618 + AluY SINE Alu 5 298 -13 6338 81 9 19 chr2 20861236 20862041 -229825813 + L1PA10 LINE L1 5369 6165 -3 2388 67 0 7 chr2 20863210 20863507 -229824347 + AluSg SINE Alu 1 295 -15 1042 100 7 0 chr2 20863870 20864010 -229823844 + AluSq/x SINE Alu 3 143 -170 358 136 34 0 chr2 20864011 20864070 -229823784 + Alu SINE Alu 240 300 -1 312 118 52 46 chr2 20865543 20865696 -229822158 + (TA)n Simple_repeat Simple_repeat 1 154 0 953 250 45 16 chr2 20866016 20866260 -229821594 - MIR SINE MIR -8 254 4 186 335 37 31 chr2 20866260 20866389 -229821465 + L2 LINE L2 2225 2354 -960 682 213 11 44 chr2 20867037 20867220 -229820634 + MER5B DNA MER1_type 2 178 0 245 312 95 12 chr2 20867843 20867950 -229819904 + MIR SINE MIR 38 151 -85 474 252 0 0 chr2 20868441 20868544 -229819310 + MIR SINE MIR 157 259 -3 23 33 0 0 chr2 20868897 20868927 -229818927 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 20875723 20875753 -229812101 + AT_rich Low_complexity Low_complexity 1 30 0 1055 315 71 40 chr2 20877124 20877829 -229810025 + ERVL LTR ERVL 3459 4185 -1579 237 122 78 0 chr2 20877908 20878023 -229809831 + (TA)n Simple_repeat Simple_repeat 1 124 0 305 188 35 0 chr2 20878047 20878132 -229809722 + (TA)n Simple_repeat Simple_repeat 1 88 0 41 58 0 0 chr2 20878771 20878840 -229809014 + AT_rich Low_complexity Low_complexity 1 69 0 1226 175 72 7 chr2 20879064 20879370 -229808484 - MER33 DNA MER1_type -7 317 1 1029 220 0 40 chr2 20880057 20880280 -229807574 + MER20 DNA MER1_type 6 219 0 27 0 0 0 chr2 20880422 20880449 -229807405 + AT_rich Low_complexity Low_complexity 1 27 0 905 326 98 22 chr2 20880517 20880880 -229806974 + L2 LINE L2 2434 2876 -437 204 40 0 0 chr2 20880880 20880905 -229806949 + (CCA)n Simple_repeat Simple_repeat 1 25 0 905 326 98 22 chr2 20880905 20881136 -229806718 + L2 LINE L2 2876 3088 -225 4841 205 100 10 chr2 20881202 20882441 -229805413 - Charlie1a DNA MER1_type -1 1454 104 554 160 42 17 chr2 20882443 20882562 -229805292 + L1M4 LINE L1 4859 4980 -1166 302 176 0 0 chr2 20882564 20882615 -229805239 + Tigger5 DNA MER2_type 2 52 -2271 529 189 11 0 chr2 20882672 20882762 -229805092 - Tigger5 DNA MER2_type -2231 92 2 513 207 0 0 chr2 20882774 20882861 -229804993 + Tigger5 DNA MER2_type 2237 2323 0 1733 216 67 13 chr2 20882862 20882951 -229804903 + L1M4 LINE L1 4978 5061 -1117 2164 137 103 5 chr2 20882951 20883339 -229804515 + MSTC LTR MaLR 1 426 -2 1733 216 67 13 chr2 20883339 20884004 -229803850 + L1M4 LINE L1 5061 5778 -400 978 180 12 6 chr2 20884008 20884180 -229803674 + AluSc SINE Alu 121 293 -16 2510 61 0 0 chr2 20884501 20884796 -229803058 + AluY SINE Alu 1 295 -16 302 355 61 22 chr2 20884902 20885130 -229802724 + L1ME LINE L1 5426 5662 -459 2834 224 62 37 chr2 20885221 20886479 -229801375 + L1ME1 LINE L1 4547 5851 -315 2090 93 4 0 chr2 20886479 20886758 -229801096 + AluSp SINE Alu 23 302 -11 2834 224 62 37 chr2 20886758 20887077 -229800777 + L1ME1 LINE L1 5851 6161 -5 291 93 0 0 chr2 20887085 20887128 -229800726 + (CA)n Simple_repeat Simple_repeat 2 44 0 21 57 0 0 chr2 20887173 20887208 -229800646 + AT_rich Low_complexity Low_complexity 1 35 0 210 37 0 0 chr2 20887666 20887693 -229800161 + (CA)n Simple_repeat Simple_repeat 1 27 0 207 0 0 0 chr2 20888282 20888305 -229799549 + (CA)n Simple_repeat Simple_repeat 1 23 0 204 40 0 0 chr2 20888364 20888389 -229799465 + (CA)n Simple_repeat Simple_repeat 1 25 0 189 0 0 0 chr2 20888625 20888646 -229799208 + (CA)n Simple_repeat Simple_repeat 1 21 0 565 256 23 6 chr2 20889645 20889817 -229798037 + L1MC4 LINE L1 7714 7888 -154 285 158 0 0 chr2 20889829 20889899 -229797955 + L1MC4 LINE L1 7927 7995 0 807 263 109 42 chr2 20890221 20891103 -229796751 - L1M4 LINE L1 -3005 3141 2201 566 167 0 0 chr2 20891546 20891654 -229796200 - L1MA4 LINE L1 -5 6295 6188 1921 139 8 27 chr2 20891656 20892057 -229795797 - L1MA4 LINE L1 -691 5609 5215 1756 194 10 25 chr2 20892051 20892448 -229795406 + L1MA4 LINE L1 4821 5211 -935 * 257 300 0 0 chr2 20892539 20892599 -229795255 + L2 LINE L2 2989 3048 -224 622 283 25 89 chr2 20892611 20892858 -229794996 + Charlie2 DNA MER1_type 2 220 -2562 2336 104 0 0 chr2 20892858 20893156 -229794698 + AluSx SINE Alu 1 298 -14 622 283 25 89 chr2 20893156 20893268 -229794586 + Charlie2 DNA MER1_type 220 338 -2444 219 36 0 0 chr2 20893321 20893349 -229794505 + (CAA)n Simple_repeat Simple_repeat 3 30 0 293 159 0 44 chr2 20893351 20893429 -229794425 + L1ME3A LINE L1 6092 6165 0 532 226 166 42 chr2 20893433 20893650 -229794204 + Charlie2a DNA MER1_type 1703 1946 -916 356 285 131 83 chr2 20894747 20895084 -229792770 + L1ME4a LINE L1 5480 5832 -289 333 0 0 0 chr2 20895345 20895382 -229792472 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 1564 136 19 87 chr2 20895523 20895833 -229792021 - AluJo SINE Alu -18 294 6 2117 121 3 3 chr2 20896054 20896359 -229791495 - AluSq SINE Alu -8 305 1 2278 69 0 4 chr2 20897477 20897754 -229790100 + AluSc SINE Alu 15 290 -19 941 295 84 14 chr2 20897947 20898377 -229789477 + LTR40c LTR ERVL 1 460 -5 327 366 143 7 chr2 20898417 20898690 -229789164 - L2 LINE L2 0 3272 2963 273 235 0 15 chr2 20898765 20898833 -229789021 - HsTC2 DNA Tc2 -1818 80 14 1126 253 50 13 chr2 20899399 20899700 -229788154 - MLT1H LTR MaLR -237 312 1 545 264 51 76 chr2 20899789 20900065 -229787789 + L2 LINE L2 3045 3313 0 22 0 0 0 chr2 20900081 20900103 -229787751 + AT_rich Low_complexity Low_complexity 1 22 0 344 304 76 67 chr2 20900159 20900517 -229787337 + MLT1H LTR MaLR 47 375 -34 2019 128 11 0 chr2 20900673 20900981 -229786873 + AluSq SINE Alu 1 311 0 470 260 91 69 chr2 20901061 20901523 -229786331 + L1M4 LINE L1 2651 3122 -3024 1944 282 78 11 chr2 20901531 20902629 -229785225 + L1ME1 LINE L1 35 1226 -5170 3801 231 58 100 chr2 20902631 20904914 -229782940 + L1ME1 LINE L1 1275 3652 -2563 2131 65 61 0 chr2 20904914 20905192 -229782662 + AluY SINE Alu 3 297 -14 3801 231 58 100 chr2 20905192 20906290 -229781564 + L1ME1 LINE L1 3652 4470 -1745 1905 136 35 0 chr2 20906290 20906576 -229781278 + AluSx SINE Alu 1 296 -16 3801 231 58 100 chr2 20906576 20906778 -229781076 + L1ME1 LINE L1 4470 4679 -1536 2079 104 13 7 chr2 20906784 20907083 -229780771 - AluSg SINE Alu -9 301 1 262 254 82 9 chr2 20907100 20907210 -229780644 + L1ME1 LINE L1 4768 4885 -1330 1732 206 5 29 chr2 20907219 20907603 -229780251 + L1ME1 LINE L1 5857 6231 -4 235 225 82 16 chr2 20907608 20907790 -229780064 + L1M4 LINE L1 3125 3318 -2828 211 147 0 0 chr2 20908811 20908845 -229779009 + L2 LINE L2 3265 3298 -15 403 207 129 26 chr2 20908855 20908971 -229778883 + L2 LINE L2 3183 3310 -3 416 303 55 21 chr2 20909732 20909877 -229777977 - MER5B DNA MER1_type 0 178 29 439 189 102 39 chr2 20909929 20909950 -229777904 - MER20 DNA MER1_type -1 218 200 2265 215 118 35 chr2 20909950 20910713 -229777141 + LTR1B LTR ERV1 1 826 0 439 189 102 39 chr2 20910713 20910818 -229777036 - MER20 DNA MER1_type -19 200 84 1897 73 16 0 chr2 20910821 20911066 -229776788 + HERV9 LTR ERV1 7872 8120 -279 * 2392 102 29 37 chr2 20911039 20911648 -229776206 + LTR12 LTR ERV1 348 714 0 357 205 26 13 chr2 20911652 20911730 -229776124 - MER20 DNA MER1_type -140 79 1 576 222 44 116 chr2 20911746 20911858 -229775996 + MER3 DNA MER1_type 1 91 -118 1618 187 13 32 chr2 20911858 20912174 -229775680 + AluJo SINE Alu 2 311 -1 576 222 44 116 chr2 20912174 20912286 -229775568 + MER3 DNA MER1_type 91 209 0 2983 159 30 14 chr2 20912637 20913209 -229774645 + L1MB8 LINE L1 5598 6178 0 232 259 12 157 chr2 20914369 20914535 -229773319 + L2 LINE L2 3039 3180 -92 36 53 0 0 chr2 20916096 20916153 -229771701 + AT_rich Low_complexity Low_complexity 1 57 0 364 144 41 41 chr2 20917029 20917126 -229770728 + MIR3 SINE MIR 112 208 0 2290 84 0 29 chr2 20917979 20918289 -229769565 + AluSg SINE Alu 6 306 -4 262 299 75 27 chr2 20918745 20918892 -229768962 - L3b LINE CR1 -146 1437 1284 324 345 21 27 chr2 20919002 20919168 -229768686 + MIR SINE MIR 42 209 -53 3252 149 107 5 chr2 20919252 20919520 -229768334 + L1MB3 LINE L1 5487 5726 -457 264 100 0 0 chr2 20919520 20919560 -229768294 + (CA)n Simple_repeat Simple_repeat 1 40 0 3252 149 107 5 chr2 20919560 20919917 -229767937 + L1MB3 LINE L1 5726 6176 -7 180 97 0 0 chr2 20920185 20920216 -229767638 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 346 273 148 22 chr2 20920699 20920882 -229766972 + MIR SINE MIR 7 212 -50 585 283 33 11 chr2 20920978 20921162 -229766692 - MIR SINE MIR -1 261 74 584 288 268 40 chr2 20922200 20923055 -229764799 + L1M4 LINE L1 2960 4009 -2137 2509 55 0 0 chr2 20923057 20923364 -229764490 + AluY SINE Alu 1 307 -4 456 266 101 14 chr2 20923533 20923719 -229764135 - MLT1J2 LTR MaLR -248 198 1 394 347 72 7 chr2 20924071 20924348 -229763506 + L1M4 LINE L1 5006 5300 -846 563 288 82 88 chr2 20924946 20925571 -229762283 + HAL1 LINE L1 827 1447 -1060 361 298 30 34 chr2 20925577 20925812 -229762042 + HAL1 LINE L1 1425 1658 -849 2474 71 0 3 chr2 20925830 20926141 -229761713 - AluY SINE Alu -1 310 1 330 274 74 51 chr2 20926493 20926668 -229761186 + L1MDa LINE L1 2350 2528 -4012 621 112 0 0 chr2 20926687 20926799 -229761055 + AluSg/x SINE Alu 195 306 0 735 309 134 31 chr2 20926930 20927513 -229760341 + L1MDa LINE L1 2706 3348 -3192 819 71 0 0 chr2 20928793 20928925 -229758929 - AluSp/q SINE Alu 0 319 188 254 289 145 0 chr2 20929070 20929153 -229758701 + MIR SINE MIR 20 114 -148 402 343 18 11 chr2 20929732 20929908 -229757946 - MIR SINE MIR -29 179 6 375 306 129 43 chr2 20929931 20930186 -229757668 + L1M4 LINE L1 4788 5064 -1082 320 244 217 0 chr2 20930736 20930851 -229757003 + MIR SINE MIR 113 252 -10 1131 207 61 105 chr2 20930857 20931248 -229756606 - MLT1A2 LTR MaLR 0 374 1 2109 212 45 25 chr2 20931248 20931719 -229756135 - MLT1A2-int LTR MaLR 0 1735 1256 2145 206 63 2 chr2 20932046 20932492 -229755362 - MLT1A2-int LTR MaLR -639 732 260 247 88 0 0 chr2 20932483 20932517 -229755337 - MLT1A2-int LTR MaLR -1620 115 82 * 6150 74 6 0 chr2 20932514 20933516 -229754338 - L1PA7 LINE L1 -597 5557 4552 4545 53 16 0 chr2 20933516 20934085 -229753769 + L1PA7 LINE L1 5569 6147 -7 680 190 26 0 chr2 20934111 20934227 -229753627 + AluJo SINE Alu 16 134 -178 524 146 10 68 chr2 20934251 20934354 -229753500 - MLT1A2-int LTR MaLR -1273 98 2 1642 176 26 57 chr2 20934355 20934741 -229753113 - MLT1A2 LTR MaLR 0 374 1 2666 216 53 3 chr2 20936043 20936690 -229751164 + L1M4 LINE L1 4286 4964 -1182 2571 246 31 12 chr2 20936703 20937383 -229750471 + L1MCb LINE L1 4 696 -5349 * 3599 232 147 28 chr2 20937379 20938570 -229749284 + L1M4 LINE L1 3671 5056 -1090 2072 138 3 0 chr2 20938570 20938868 -229748986 + AluSx SINE Alu 1 299 -13 3599 232 147 28 chr2 20938868 20939082 -229748772 + L1M4 LINE L1 5056 5243 -903 1976 159 65 15 chr2 20939103 20939505 -229748349 + L1MC3 LINE L1 7358 7779 -6 1860 198 39 8 chr2 20939508 20940126 -229747728 + L1M4 LINE L1 4945 5582 -596 1939 144 6 72 chr2 20940361 20940722 -229747132 + MER1B DNA MER1_type 1 337 0 211 278 56 67 chr2 20940996 20941086 -229746768 + L2 LINE L2 2996 3084 -188 58 15 0 0 chr2 20941257 20941322 -229746532 + AT_rich Low_complexity Low_complexity 1 65 0 195 42 0 0 chr2 20941458 20941482 -229746372 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 339 294 231 6 chr2 20941601 20941761 -229746093 + MIR3 SINE MIR 6 201 -7 542 245 216 5 chr2 20941850 20942054 -229745800 - MIR SINE MIR 0 262 16 2214 60 0 3 chr2 20943475 20943759 -229744095 + L1PA6 LINE L1 5865 6147 -7 703 259 41 25 chr2 20944219 20944462 -229743392 - MER112 DNA MER1_type -6 254 8 420 20 0 0 chr2 20945387 20945436 -229742418 + (A)n Simple_repeat Simple_repeat 1 49 0 2610 188 35 16 chr2 20947288 20947837 -229740017 - L1MB1 LINE L1 -2 6166 5608 1055 307 98 50 chr2 20948710 20949564 -229738290 - L2 LINE L2 -685 2629 1735 212 182 36 36 chr2 20949645 20949700 -229738154 - MIR SINE MIR -40 222 168 807 247 32 65 chr2 20949710 20949957 -229737897 - MIR SINE MIR 0 262 24 960 133 0 0 chr2 20950921 20951101 -229736753 + (AGATG)n Simple_repeat Simple_repeat 1 180 0 1125 170 78 92 chr2 20951357 20951667 -229736187 - AluJb SINE Alu 0 311 6 394 157 0 36 chr2 20952224 20952307 -229735547 + MER116 DNA Mariner 1 80 0 619 268 51 47 chr2 20952486 20952740 -229735114 - MIR SINE MIR -4 258 4 2433 180 20 9 chr2 20952764 20953220 -229734634 - MER65C LTR ERV1 0 461 1 831 251 54 17 chr2 20954879 20955118 -229732736 - MIR SINE MIR -1 261 14 2131 109 39 0 chr2 20955365 20955650 -229732204 + AluSp SINE Alu 1 296 -17 1071 232 25 4 chr2 20955890 20956170 -229731684 + L1M4 LINE L1 2528 2813 -3333 1497 177 123 24 chr2 20957052 20957391 -229730463 + MLT1A2 LTR MaLR 1 374 0 1465 161 17 0 chr2 20957391 20957625 -229730229 + MLT1B LTR MaLR 35 272 -118 2034 110 48 6 chr2 20957626 20957962 -229729892 + L1MA5A LINE L1 5944 6293 -4 2108 111 18 0 chr2 20958119 20958433 -229729421 + AluSq SINE Alu 1 319 0 732 167 0 0 chr2 20958460 20958574 -229729280 + MLT1B LTR MaLR 260 373 -17 341 141 14 0 chr2 20958747 20958818 -229729036 + GA-rich Low_complexity Low_complexity 1 72 0 277 377 9 0 chr2 20959845 20959959 -229727895 + MIR SINE MIR 24 138 -124 4369 178 26 16 chr2 20961058 20962137 -229725717 + L1MB8 LINE L1 4975 6074 -104 208 238 38 50 chr2 20962737 20962817 -229725037 + L3 LINE CR1 1498 1576 -1 2466 111 11 24 chr2 20962909 20963289 -229724565 + THE1C LTR MaLR 1 375 0 2242 117 0 7 chr2 20963314 20963621 -229724233 - AluSx SINE Alu -7 305 1 225 0 0 0 chr2 20963744 20963769 -229724085 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 209 305 49 24 chr2 20963771 20963853 -229724001 + MIR3 SINE MIR 104 187 -21 289 270 43 0 chr2 20964888 20965003 -229722851 - MIR3 SINE MIR -4 204 85 270 0 0 0 chr2 20965785 20965815 -229722039 + (TG)n Simple_repeat Simple_repeat 1 30 0 2091 105 0 7 chr2 20966898 20967174 -229720680 + AluSg SINE Alu 29 302 -8 217 87 22 22 chr2 20969196 20969242 -229718612 + (CTG)n Simple_repeat Simple_repeat 1 46 0 764 192 148 6 chr2 20971359 20971541 -229716313 - MER3 DNA MER1_type -1 208 1 2306 119 25 19 chr2 20972814 20973176 -229714678 - THE1B LTR MaLR 0 364 1 965 107 0 20 chr2 20973433 20973582 -229714272 - L1MA5A LINE L1 -2 6295 6150 587 295 77 49 chr2 20973721 20974300 -229713554 + L1ME4a LINE L1 5334 5933 -188 2248 120 3 0 chr2 20974486 20974795 -229713059 + AluSx SINE Alu 1 310 -2 186 214 48 107 chr2 20978789 20978873 -229708981 - MIR SINE MIR -81 181 103 183 310 35 11 chr2 20980403 20980490 -229707364 - L2 LINE L2 -248 3024 2936 273 271 58 58 chr2 20981002 20981190 -229706664 - L1MC4 LINE L1 -27 8015 7828 1402 154 9 4 chr2 20981250 20981477 -229706377 - AluJb SINE Alu 0 312 85 5032 167 10 9 chr2 20981514 20983043 -229704811 - L1PB4 LINE L1 0 6156 4624 281 87 0 22 chr2 20983596 20983642 -229704212 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 2154 143 0 6 chr2 20983642 20983956 -229703898 - AluSx SINE Alu 0 312 1 2511 62 0 7 chr2 20985511 20985817 -229702037 + AluY SINE Alu 1 304 -7 209 367 111 6 chr2 20985875 20986055 -229701799 + MIR SINE MIR 37 235 -27 316 322 49 44 chr2 20986560 20986576 -229701278 + MIR SINE MIR 20 34 -228 2191 122 0 7 chr2 20986576 20986871 -229700983 + AluSg SINE Alu 1 293 -17 316 322 49 44 chr2 20986871 20987059 -229700795 + MIR SINE MIR 34 225 -37 270 236 236 9 chr2 20987279 20987385 -229700469 + MER5A DNA MER1_type 55 184 -5 1858 133 36 23 chr2 20988480 20988788 -229699066 - AluSx SINE Alu 0 312 1 25 31 0 0 chr2 20988966 20988998 -229698856 + AT_rich Low_complexity Low_complexity 1 32 0 1753 162 0 39 chr2 20990856 20991165 -229696689 + AluJo SINE Alu 1 297 -15 649 328 131 25 chr2 20991198 20992279 -229695575 - L2 LINE L2 -73 3199 2014 249 296 134 20 chr2 20992546 20992793 -229695061 - L2 LINE L2 -1327 1987 1713 243 213 245 0 chr2 20992921 20993015 -229694839 + MIR SINE MIR 98 214 -48 201 237 17 34 chr2 20994217 20994276 -229693578 - L2 LINE L2 -8 3305 3248 1816 253 98 31 chr2 20994276 20995156 -229692698 - L2 LINE L2 -20 3293 2346 1017 286 97 3 chr2 20995523 20995883 -229691971 + L2 LINE L2 2890 3283 -30 2363 74 0 0 chr2 20996079 20996422 -229691432 - AluY SINE Alu 0 343 1 2388 99 0 0 chr2 20996824 20997117 -229690737 - AluSc SINE Alu -16 293 1 620 278 45 20 chr2 20997163 20997361 -229690493 - MIR SINE MIR -8 254 52 185 233 27 27 chr2 21000237 21000310 -229687544 - L2 LINE L2 -168 3104 3032 185 178 22 0 chr2 21009456 21009501 -229678353 + CT-rich Low_complexity Low_complexity 3 48 0 49 0 0 0 chr2 21011876 21011925 -229675929 + AT_rich Low_complexity Low_complexity 1 49 0 278 205 29 29 chr2 21011925 21012096 -229675758 + (TATAA)n Simple_repeat Simple_repeat 1 171 0 166 63 0 0 chr2 21012103 21012402 -229675452 + AT_rich Low_complexity Low_complexity 1 299 0 279 203 0 0 chr2 21013372 21013431 -229674423 + (TGGA)n Simple_repeat Simple_repeat 4 62 0 315 313 15 30 chr2 21013904 21014038 -229673816 + MIR SINE MIR 74 205 -57 203 247 62 49 chr2 21014158 21014239 -229673615 - L2 LINE L2 -18 3254 3173 2335 113 132 5 chr2 21014700 21015079 -229672775 - MSTA LTR MaLR 0 428 2 227 370 22 0 chr2 21017071 21017163 -229670691 + MIR SINE MIR 54 147 -115 180 308 0 19 chr2 21017216 21017268 -229670586 + MIR SINE MIR 158 208 -54 2244 110 3 3 chr2 21017461 21017770 -229670084 - AluSc SINE Alu 0 309 1 241 353 0 0 chr2 21018155 21018240 -229669614 - L2 LINE L2 -2 3311 3227 452 244 39 8 chr2 21018337 21018464 -229669390 + MIR SINE MIR 16 146 -116 340 244 110 31 chr2 21020303 21020430 -229667424 + MIR3 SINE MIR 6 142 -66 326 227 0 0 chr2 21020466 21020541 -229667313 + L2 LINE L2 3198 3272 0 605 279 42 9 chr2 21024231 21024446 -229663408 + MIR SINE MIR 20 241 -21 284 211 0 0 chr2 21025247 21025299 -229662555 - MIR SINE MIR -114 148 97 241 230 286 24 chr2 21025429 21025555 -229662299 - MIR SINE MIR -29 233 75 386 331 6 12 chr2 21026003 21026172 -229661682 + (CATA)n Simple_repeat Simple_repeat 2 169 0 183 42 0 0 chr2 21026902 21026926 -229660928 + (T)n Simple_repeat Simple_repeat 1 24 0 203 121 121 24 chr2 21027267 21027350 -229660504 + (TTCA)n Simple_repeat Simple_repeat 3 93 0 2304 84 7 0 chr2 21028067 21028364 -229659490 - AluY SINE Alu -12 299 1 609 247 56 0 chr2 21028680 21028842 -229659012 - MIR SINE MIR -74 188 18 23 0 0 0 chr2 21031417 21031440 -229656414 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 21033842 21033864 -229653990 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 21034683 21034705 -229653149 + (TG)n Simple_repeat Simple_repeat 2 23 0 219 315 125 51 chr2 21034916 21035132 -229652722 + L2 LINE L2 3004 3235 -37 2028 216 49 70 chr2 21036245 21036305 -229651549 - MLT2B1 LTR ERVL 0 520 460 1277 219 4 4 chr2 21036305 21036543 -229651311 + MER8 DNA MER2_type 2 239 0 2028 216 49 70 chr2 21036543 21037011 -229650843 - MLT2B1 LTR ERVL -60 460 3 242 362 9 17 chr2 21039677 21039793 -229648061 + L2 LINE L2 3153 3267 -5 312 290 21 0 chr2 21041293 21041386 -229646468 + GA-rich Low_complexity Low_complexity 2 96 0 232 318 217 23 chr2 21041457 21041674 -229646180 - L2 LINE L2 -467 2847 2589 181 346 0 48 chr2 21042280 21042384 -229645470 - L2 LINE L2 -2915 399 301 672 292 92 49 chr2 21043485 21043876 -229643978 + HERV16 LTR ERVL 2 409 -4587 1008 296 60 82 chr2 21043980 21044925 -229642929 + HERV16 LTR ERVL 1760 2684 -2312 7086 184 47 11 chr2 21044929 21046525 -229641329 - Charlie5 DNA MER1_type 0 2624 972 762 160 8 0 chr2 21046542 21046667 -229641187 - FLAM_A SINE Alu -16 126 1 3796 213 31 26 chr2 21046667 21047523 -229640331 - Charlie5 DNA MER1_type -41 121 130 2226 88 7 3 chr2 21047523 21047817 -229640037 - AluY SINE Alu -16 295 1 3796 213 31 26 chr2 21047817 21047976 -229639878 - Charlie5 DNA MER1_type -31 131 1 2750 345 64 32 chr2 21047977 21049586 -229638268 + HERV16 LTR ERVL 2748 4408 -1356 1786 164 3 3 chr2 21049911 21050204 -229637650 - AluSx SINE Alu -14 298 6 188 354 69 23 chr2 21051333 21051508 -229636346 + L3 LINE CR1 174 356 -1221 221 276 149 45 chr2 21053046 21053180 -229634674 - MER5A DNA MER1_type -24 165 18 669 222 17 45 chr2 21053201 21053377 -229634477 + MIR SINE MIR 56 226 -36 24 0 0 0 chr2 21055021 21055045 -229632809 + AT_rich Low_complexity Low_complexity 1 24 0 229 328 35 60 chr2 21055077 21055193 -229632661 - L2 LINE L2 -22 3250 3138 243 0 0 0 chr2 21055567 21055594 -229632260 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 194 250 0 21 chr2 21055701 21055749 -229632105 + L2 LINE L2 3264 3310 -3 240 333 81 21 chr2 21057109 21057295 -229630559 + MIR3 SINE MIR 3 199 -9 196 361 111 19 chr2 21057809 21058017 -229629837 + L2 LINE L2 2428 2654 -660 1633 305 64 35 chr2 21058553 21059781 -229628073 - L1M4 LINE L1 -2752 3394 2131 1630 167 0 22 chr2 21060032 21060301 -229627553 - AluJo SINE Alu -49 263 1 1957 167 42 11 chr2 21060567 21060679 -229627175 - L1MB7 LINE L1 -11 6173 6066 4148 38 0 2 chr2 21060679 21061149 -229626705 - L1PA5 LINE L1 0 6154 5686 1957 167 42 11 chr2 21061149 21061414 -229626440 - L1MB7 LINE L1 -118 6066 5784 206 213 0 21 chr2 21062985 21063032 -229624822 + L2 LINE L2 3266 3311 -2 228 254 18 0 chr2 21063323 21063378 -229624476 + L2 LINE L2 3217 3272 0 2440 70 7 0 chr2 21063414 21063713 -229624141 + AluSx SINE Alu 11 311 -1 292 292 0 22 chr2 21064192 21064281 -229623573 + MER5B DNA MER1_type 82 168 -10 383 231 30 75 chr2 21064329 21064463 -229623391 + MER5A DNA MER1_type 57 184 -5 373 236 300 29 chr2 21064469 21064609 -229623245 - MER5B DNA MER1_type 0 178 1 242 328 82 0 chr2 21064804 21064926 -229622928 + L1ME4a LINE L1 4037 4168 -1978 351 165 101 0 chr2 21064963 21065042 -229622812 - L1MB8 LINE L1 -1 6177 6091 412 317 52 24 chr2 21065123 21065273 -229622581 + L1ME4a LINE L1 4265 4409 -1737 1948 149 3 13 chr2 21065273 21065588 -229622266 - AluJb SINE Alu 0 312 1 412 317 52 24 chr2 21065588 21065860 -229621994 + L1ME4a LINE L1 4409 4699 -1447 673 285 33 50 chr2 21066312 21066673 -229621181 + L1ME4a LINE L1 5501 5855 -266 1886 179 44 11 chr2 21067389 21067825 -229620029 + MER89 LTR ERV1 1 550 -9 1054 219 47 78 chr2 21068324 21068707 -229619147 + MLT2D LTR ERVL 1 371 -43 229 233 26 43 chr2 21068709 21068825 -229619029 + (TA)n Simple_repeat Simple_repeat 2 115 0 213 65 0 0 chr2 21070122 21070153 -229617701 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 247 265 94 34 chr2 21070275 21070392 -229617462 - L2 LINE L2 -208 3064 2941 416 261 92 76 chr2 21071227 21071465 -229616389 - L2 LINE L2 -2 3311 3070 1059 200 128 11 chr2 21071521 21071580 -229616274 - L1MB7 LINE L1 -16 6168 6117 2455 78 0 0 chr2 21071580 21071876 -229615978 - AluY SINE Alu -15 296 1 1059 200 128 11 chr2 21071876 21072081 -229615773 - L1MB7 LINE L1 -67 6117 5873 956 110 158 0 chr2 21072084 21072248 -229615606 + MER30 DNA MER1_type 1 190 -40 44469 41 6 1 chr2 21072249 21078385 -229609469 + L1PA4 LINE L1 2 6165 0 228 245 0 0 chr2 21078385 21078434 -229609420 + MER30 DNA MER1_type 182 230 0 2070 202 20 5 chr2 21078472 21078912 -229608942 - L1MB7 LINE L1 -365 5819 5373 928 235 151 10 chr2 21078894 21079192 -229608662 - L1MB7 LINE L1 -1743 4403 4064 * 617 274 50 17 chr2 21079327 21079568 -229608286 - L2 LINE L2 -1069 2245 1997 726 235 93 99 chr2 21081218 21081724 -229606130 + LTR33 LTR ERVL 4 506 -15 216 0 0 0 chr2 21082394 21082418 -229605436 + (T)n Simple_repeat Simple_repeat 1 24 0 259 328 15 0 chr2 21083989 21084056 -229603798 + MLT2F LTR ERVL 186 253 -410 469 312 42 33 chr2 21084979 21085194 -229602660 - MIR SINE MIR -20 242 26 194 105 26 0 chr2 21085421 21085459 -229602395 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 820 250 25 33 chr2 21085480 21085978 -229601876 - MLT2F LTR ERVL -57 606 6 2709 7 0 0 chr2 21086232 21086523 -229601331 + AluY SINE Alu 21 311 0 252 0 0 0 chr2 21089479 21089507 -229598347 + (TG)n Simple_repeat Simple_repeat 1 28 0 42 48 0 0 chr2 21089635 21089698 -229598156 + AT_rich Low_complexity Low_complexity 1 63 0 23 33 0 0 chr2 21089922 21089952 -229597902 + AT_rich Low_complexity Low_complexity 1 30 0 2521 124 21 24 chr2 21090556 21090935 -229596919 + MER83B LTR ERV1 1 378 0 358 305 89 32 chr2 21092620 21092810 -229595044 + MIR3 SINE MIR 3 203 -5 223 226 119 83 chr2 21093232 21093316 -229594538 - L3 LINE CR1 -1 1576 1490 487 241 171 6 chr2 21093317 21093475 -229594379 + MER5A DNA MER1_type 4 187 -2 194 318 32 0 chr2 21093475 21093537 -229594317 - L3 LINE CR1 -77 1500 1437 319 228 50 40 chr2 21093621 21093722 -229594132 - MIR SINE MIR -10 252 151 503 301 87 6 chr2 21093727 21093900 -229593954 - MIR SINE MIR -71 191 5 438 314 251 23 chr2 21093902 21094341 -229593513 - L3 LINE CR1 -201 1376 838 657 281 63 48 chr2 21094494 21094825 -229593029 - L3 LINE CR1 -758 819 484 2061 263 67 18 chr2 21095002 21095614 -229592240 - MLT2F LTR ERVL -6 657 16 2745 271 60 31 chr2 21095614 21096605 -229591249 - ERVL-F LTR ERVL -40 5724 4705 2113 220 72 28 chr2 21096581 21096668 -229591186 + ERVL LTR ERVL 2306 2388 -3376 * 2591 58 0 6 chr2 21096668 21096979 -229590875 - AluY SINE Alu -2 309 1 2113 220 72 28 chr2 21096979 21097422 -229590432 + ERVL LTR ERVL 2388 2859 -2905 206 214 376 34 chr2 21097661 21097778 -229590076 + MIR SINE MIR 48 204 -58 205 337 27 38 chr2 21097857 21098019 -229589835 - MIR SINE MIR -72 136 2 21 0 0 0 chr2 21098332 21098353 -229589501 + AT_rich Low_complexity Low_complexity 1 21 0 557 207 9 182 chr2 21098802 21099131 -229588723 - TAR1 Satellite telomeric -1831 280 9 * 3621 129 7 24 chr2 21098925 21099131 -229588723 - LTR60 LTR ERV1 -1 585 377 1695 246 55 66 chr2 21099131 21099749 -229588105 - LTR9 LTR ERV1 0 612 2 3621 129 7 24 chr2 21099749 21100137 -229587717 - LTR60 LTR ERV1 -209 377 1 272 310 120 21 chr2 21100540 21100682 -229587172 - MIR SINE MIR -44 218 63 280 300 0 0 chr2 21101435 21101515 -229586339 + MER116 DNA Mariner 1 80 0 433 202 0 45 chr2 21101532 21101621 -229586233 + L2 LINE L2 3229 3313 0 1057 118 11 6 chr2 21102744 21102922 -229584932 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2064 124 0 0 chr2 21102925 21103208 -229584646 - AluSx SINE Alu -29 283 1 1554 291 59 12 chr2 21103596 21104090 -229583764 + MER69 DNA AcHobo 1 517 -709 1028 220 89 18 chr2 21104094 21104421 -229583433 + MER69 DNA AcHobo 2170 2519 -7 211 226 0 19 chr2 21104891 21104944 -229582910 + MIR SINE MIR 96 147 -115 440 214 12 23 chr2 21106101 21106361 -229581493 + CT-rich Low_complexity Low_complexity 1 257 0 210 245 113 0 chr2 21106403 21106456 -229581398 - L2 LINE L2 -35 3237 3179 558 0 0 0 chr2 21107097 21107159 -229580695 + (TA)n Simple_repeat Simple_repeat 1 62 0 418 287 61 49 chr2 21107220 21107384 -229580470 + MIR SINE MIR 15 180 -82 632 209 23 6 chr2 21107863 21108040 -229579814 + GA-rich Low_complexity Low_complexity 1 180 0 252 77 0 0 chr2 21108480 21108519 -229579335 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 604 254 136 40 chr2 21108892 21109120 -229578734 + MIR SINE MIR 13 262 0 223 404 22 7 chr2 21109285 21109421 -229578433 - L3 LINE CR1 -6 1571 1434 402 57 0 0 chr2 21110100 21110153 -229577701 + (CA)n Simple_repeat Simple_repeat 2 54 0 1969 122 0 4 chr2 21110173 21110452 -229577402 - AluSq SINE Alu 0 313 36 610 299 27 0 chr2 21110502 21110689 -229577165 - MIR SINE MIR -64 198 7 578 352 52 53 chr2 21111163 21111580 -229576274 + L2 LINE L2 2842 3255 -17 422 237 38 23 chr2 21112279 21112410 -229575444 + MER94 DNA DNA 1 133 -1 311 247 54 0 chr2 21112874 21112967 -229574887 + CT-rich Low_complexity Low_complexity 4 101 0 188 200 127 36 chr2 21114377 21114432 -229573422 - L2 LINE L2 -18 3254 3195 3035 68 11 0 chr2 21114434 21114785 -229573069 - THE1A LTR MaLR 0 355 1 10929 111 9 38 chr2 21114785 21116413 -229571441 - THE1A-int LTR MaLR 0 1580 1 2925 90 0 0 chr2 21116413 21116768 -229571086 - THE1A LTR MaLR 0 355 1 218 171 0 24 chr2 21116783 21116824 -229571030 - MER5B DNA MER1_type -17 161 122 4938 183 33 8 chr2 21116832 21118369 -229569485 + L1MB2 LINE L1 4564 6135 -36 183 246 49 16 chr2 21118441 21118502 -229569352 + MER5B DNA MER1_type 110 172 -6 246 206 109 33 chr2 21121835 21121927 -229565927 - MIR SINE MIR -80 182 84 2535 146 67 5 chr2 21122154 21122557 -229565297 + MSTA LTR MaLR 1 428 0 267 79 0 0 chr2 21123014 21123052 -229564802 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 315 339 186 17 chr2 21123731 21124021 -229563833 + L3 LINE CR1 893 1233 -340 2181 135 3 0 chr2 21124021 21124354 -229563500 + AluSp SINE Alu 1 313 0 5105 232 42 38 chr2 21125453 21126885 -229560969 + L1MC4 LINE L1 6469 7906 -136 211 331 81 24 chr2 21126958 21127082 -229560772 + MER5A DNA MER1_type 59 189 0 426 314 160 0 chr2 21127090 21127246 -229560608 - MER5A DNA MER1_type 0 189 9 464 349 26 15 chr2 21128126 21128390 -229559464 - L1ME LINE L1 -414 5756 5490 181 280 20 0 chr2 21128398 21128448 -229559406 + MIR SINE MIR 190 240 -22 212 307 67 13 chr2 21128509 21128584 -229559270 + L2 LINE L2 3235 3313 0 289 235 128 2 chr2 21128619 21128713 -229559141 - MIR SINE MIR -75 133 30 295 320 58 17 chr2 21129805 21129977 -229557877 + MIR3 SINE MIR 27 205 -3 1361 198 116 15 chr2 21130130 21130458 -229557396 - MLT1A1 LTR MaLR 0 365 5 206 338 101 14 chr2 21131267 21131415 -229556439 - L3 LINE CR1 -12 1565 1405 212 250 0 0 chr2 21131899 21131947 -229555907 + (CA)n Simple_repeat Simple_repeat 2 49 0 275 306 225 0 chr2 21132219 21132330 -229555524 + MIR3 SINE MIR 54 189 -19 290 317 177 18 chr2 21132602 21132766 -229555088 + MIR3 SINE MIR 18 207 -1 328 297 24 36 chr2 21132908 21133073 -229554781 + LTR16A LTR ERVL 26 188 -262 1395 284 23 34 chr2 21133168 21133608 -229554246 + ERVL LTR ERVL 889 1323 -3673 697 339 16 41 chr2 21133747 21134110 -229553744 + ERVL LTR ERVL 4751 5104 -660 731 274 64 34 chr2 21134528 21134859 -229552995 + LTR16A LTR ERVL 87 447 -3 187 179 0 0 chr2 21134921 21134960 -229552894 + L2 LINE L2 3273 3311 -2 942 279 0 0 chr2 21135274 21135489 -229552365 - MER58A DNA MER1_type -1 223 9 291 328 172 20 chr2 21135874 21136072 -229551782 - L2 LINE L2 -454 2860 2633 * 460 270 15 71 chr2 21136070 21136266 -229551588 + L2 LINE L2 3125 3309 -4 822 175 8 0 chr2 21136313 21136433 -229551421 - FLAM_A SINE Alu -12 121 1 273 313 12 12 chr2 21136654 21136734 -229551120 + MIR SINE MIR 19 98 -110 192 273 0 36 chr2 21136788 21136843 -229551011 + L2 LINE L2 3213 3265 -7 195 325 100 50 chr2 21137000 21137120 -229550734 - L2 LINE L2 -43 3229 3104 911 221 72 0 chr2 21137520 21137715 -229550139 - MER63A DNA MER1_type -1 209 1 442 192 42 50 chr2 21137845 21137965 -229549889 - MER103 DNA DNA -31 135 17 531 209 28 73 chr2 21137987 21138096 -229549758 - MER5A DNA MER1_type -79 99 4 212 372 35 9 chr2 21139347 21139460 -229548394 + L2 LINE L2 3071 3186 -86 2271 159 40 3 chr2 21139490 21139842 -229548012 + MLT1A1 LTR MaLR 1 365 0 247 369 39 0 chr2 21139875 21140005 -229547849 - MIR SINE MIR -47 215 81 719 285 56 86 chr2 21140993 21141653 -229546201 - L2 LINE L2 -549 2765 2126 188 340 75 0 chr2 21141980 21142074 -229545780 - L2 LINE L2 -10 3303 3203 25 0 0 0 chr2 21142116 21142141 -229545713 + AT_rich Low_complexity Low_complexity 1 25 0 259 317 71 60 chr2 21142211 21142625 -229545229 - L2 LINE L2 -208 3064 2633 186 118 0 0 chr2 21143116 21143150 -229544704 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 769 283 19 21 chr2 21144975 21145212 -229542642 + LTR16A LTR ERVL 84 313 -137 1806 203 28 60 chr2 21145504 21145938 -229541916 - MLT1D LTR MaLR -77 428 9 207 146 0 0 chr2 21146237 21146278 -229541576 + (TC)n Simple_repeat Simple_repeat 2 42 0 1593 201 17 0 chr2 21146387 21146685 -229541169 + L1MA4 LINE L1 5991 6293 -7 2192 196 0 12 chr2 21150262 21150307 -229537547 - MLT2C1 LTR ERVL 0 397 353 2390 186 41 7 chr2 21150307 21150726 -229537128 + Tigger2a DNA MER2_type 1 433 -1 2192 196 0 12 chr2 21150726 21151082 -229536772 - MLT2C1 LTR ERVL -44 353 1 266 304 111 73 chr2 21151103 21151419 -229536435 + L2 LINE L2 2944 3271 -42 2473 138 22 5 chr2 21151977 21152346 -229535508 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr2 21155366 21155388 -229532466 + AT_rich Low_complexity Low_complexity 1 22 0 522 278 92 12 chr2 21155416 21155589 -229532265 - MIR SINE MIR -56 206 20 248 351 9 0 chr2 21156156 21156267 -229531587 + G-rich Low_complexity Low_complexity 2 113 0 253 300 346 0 chr2 21156800 21156930 -229530924 - MER5A DNA MER1_type -14 175 1 1977 173 3 32 chr2 21158726 21159102 -229528752 + MLT1A1 LTR MaLR 1 365 0 264 302 91 104 chr2 21159353 21159804 -229528050 - L2 LINE L2 0 3272 2828 256 259 0 0 chr2 21160631 21160685 -229527169 + MIR3 SINE MIR 126 179 -29 247 246 0 0 chr2 21161060 21161117 -229526737 + GA-rich Low_complexity Low_complexity 2 58 0 577 164 0 9 chr2 21161595 21161705 -229526149 - MLT1D LTR MaLR -1 504 396 420 257 101 13 chr2 21161731 21161961 -229525893 + MER21B LTR ERV1 475 808 -123 719 134 24 8 chr2 21162354 21162481 -229525373 - MLT1D LTR MaLR -376 129 1 227 320 80 16 chr2 21162593 21162718 -229525136 + MIR3 SINE MIR 13 145 -63 304 232 14 0 chr2 21162756 21162825 -229525029 + L1ME4a LINE L1 1995 2064 -4362 205 288 0 0 chr2 21162827 21162886 -229524968 + (TA)n Simple_repeat Simple_repeat 2 60 0 649 244 61 50 chr2 21163021 21163201 -229524653 - MIR SINE MIR -73 189 8 181 330 154 0 chr2 21163634 21163725 -229524129 + MIR SINE MIR 48 152 -110 1880 154 44 44 chr2 21164973 21165363 -229522491 + MLT1B LTR MaLR 1 390 0 204 288 14 14 chr2 21165560 21165633 -229522221 + CT-rich Low_complexity Low_complexity 3 75 0 21 57 0 0 chr2 21166661 21166696 -229521158 + AT_rich Low_complexity Low_complexity 1 35 0 2119 141 0 0 chr2 21166945 21167277 -229520577 + AluSc SINE Alu 1 309 0 23 33 0 0 chr2 21167749 21167779 -229520075 + AT_rich Low_complexity Low_complexity 1 30 0 556 302 37 20 chr2 21168528 21168748 -229519106 + MIR SINE MIR 34 250 -12 2224 92 0 7 chr2 21169051 21169344 -229518510 - AluSp SINE Alu -22 291 1 488 295 89 35 chr2 21169452 21169884 -229517970 + L1ME4a LINE L1 2360 2777 -3649 2350 115 31 14 chr2 21170692 21171049 -229516805 + THE1B LTR MaLR 2 364 0 22 0 0 0 chr2 21171059 21171081 -229516773 + AT_rich Low_complexity Low_complexity 1 22 0 367 353 15 50 chr2 21171244 21171570 -229516284 + L1ME4a LINE L1 4855 5178 -1248 2419 119 19 11 chr2 21171668 21172038 -229515816 + THE1C LTR MaLR 1 373 -2 353 243 94 116 chr2 21172100 21172571 -229515283 + L1ME4a LINE L1 5911 6372 -29 2133 155 11 41 chr2 21172571 21173009 -229514845 - L1PB4 LINE L1 -2 6154 5730 353 243 94 116 chr2 21173009 21173039 -229514815 + L1ME4a LINE L1 6372 6401 0 275 204 133 0 chr2 21173325 21173438 -229514416 - L1MC4a LINE L1 -1911 5897 5770 337 306 111 41 chr2 21173518 21173830 -229514024 - L1MC4a LINE L1 -472 5649 5305 792 295 87 55 chr2 21174180 21174444 -229513410 - L1MC4a LINE L1 -1369 4777 4523 2541 110 3 18 chr2 21174444 21174825 -229513029 + THE1C LTR MaLR 1 375 0 792 295 87 55 chr2 21174825 21175344 -229512510 - L1MC4a LINE L1 -1623 4523 3969 2164 111 0 26 chr2 21175684 21175991 -229511863 - AluSg SINE Alu -11 299 1 366 325 41 38 chr2 21177394 21177597 -229510257 - MIR SINE MIR -53 155 1 329 188 102 7 chr2 21178716 21178864 -229508990 + L1MC4 LINE L1 7631 7901 -141 2786 145 75 9 chr2 21178903 21179447 -229508407 + L1MA4 LINE L1 5717 6296 -4 23 0 0 0 chr2 21179486 21179509 -229508345 + AT_rich Low_complexity Low_complexity 1 23 0 568 184 153 55 chr2 21179580 21179719 -229508135 + MER5A DNA MER1_type 9 168 -21 1397 197 51 46 chr2 21179719 21180089 -229507765 + MLT1A2 LTR MaLR 1 372 -2 568 184 153 55 chr2 21180089 21180112 -229507742 + MER5A DNA MER1_type 168 187 -2 180 306 82 12 chr2 21180206 21180291 -229507563 + L2 LINE L2 2879 2969 -303 316 310 23 0 chr2 21180805 21180892 -229506962 - MER5B DNA MER1_type 0 178 90 2184 70 0 4 chr2 21180905 21181175 -229506679 + AluY SINE Alu 40 308 -3 253 288 24 64 chr2 21181175 21181300 -229506554 - MER5B DNA MER1_type -54 124 5 210 350 81 12 chr2 21181668 21181828 -229506026 + L2 LINE L2 2065 2235 -1079 1278 233 158 2 chr2 21181828 21182232 -229505622 - MLT1C LTR MaLR 0 467 1 627 317 68 77 chr2 21182234 21183296 -229504558 + L2 LINE L2 2233 3270 -2 278 302 47 0 chr2 21183315 21183401 -229504453 + L2 LINE L2 3219 3308 -5 224 295 66 33 chr2 21183932 21184054 -229503800 - MIR SINE MIR -50 212 87 610 343 38 4 chr2 21184295 21184531 -229503323 - MIR SINE MIR -17 245 2 533 279 101 22 chr2 21187137 21187316 -229500538 + MIR SINE MIR 5 197 -65 299 315 93 9 chr2 21187536 21187644 -229500210 - L2 LINE L2 -14 3299 3183 23 0 0 0 chr2 21191077 21191100 -229496754 + AT_rich Low_complexity Low_complexity 1 23 0 268 400 9 0 chr2 21191237 21191347 -229496507 + L2 LINE L2 3158 3268 -4 189 0 0 0 chr2 21192173 21192194 -229495660 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 210 143 0 0 chr2 21192422 21192457 -229495397 + (T)n Simple_repeat Simple_repeat 1 35 0 195 42 0 0 chr2 21192949 21192973 -229494881 + (TCCC)n Simple_repeat Simple_repeat 2 25 0 225 259 19 0 chr2 21192978 21193032 -229494822 + CT-rich Low_complexity Low_complexity 2 56 0 2365 252 61 18 chr2 21193034 21193645 -229494209 - L1ME2 LINE L1 -12 6947 6364 189 0 0 0 chr2 21193645 21193666 -229494188 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2365 252 61 18 chr2 21193666 21194456 -229493398 - L1ME2 LINE L1 -595 6364 5493 436 227 97 11 chr2 21194476 21194652 -229493202 - L1MC4a LINE L1 0 7808 7618 458 257 80 53 chr2 21194789 21195201 -229492653 - L1ME2 LINE L1 -4738 2384 1962 342 262 99 28 chr2 21195282 21195423 -229492431 - L1ME2 LINE L1 -5214 1908 1758 428 317 35 7 chr2 21195436 21195782 -229492072 - L1ME2 LINE L1 -4867 1555 1199 300 27 0 0 chr2 21196228 21196265 -229491589 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 2226 132 33 33 chr2 21197622 21198046 -229489808 - L1MA7 LINE L1 -4 6287 5864 245 294 88 69 chr2 21198538 21198698 -229489156 + MER5A DNA MER1_type 2 164 -25 875 218 6 35 chr2 21198738 21198908 -229488946 - MER5A DNA MER1_type -10 179 15 225 313 0 18 chr2 21199190 21199302 -229488552 + MARNA DNA Mariner 400 509 -77 842 209 0 23 chr2 21199349 21199526 -229488328 - MER97c DNA MER1_type? -915 175 3 183 200 0 0 chr2 21199621 21199656 -229488198 - L3b LINE CR1 -127 1456 1422 415 242 177 27 chr2 21200345 21200531 -229487323 - MLT1H LTR MaLR 0 549 336 808 249 9 24 chr2 21200587 21200800 -229487054 - MLT1H LTR MaLR -328 221 12 233 307 43 93 chr2 21200926 21201066 -229486788 - L2 LINE L2 -18 3254 3122 2172 113 0 0 chr2 21201153 21201444 -229486410 + AluSc SINE Alu 5 295 -14 401 354 28 11 chr2 21202359 21202537 -229485317 + MIR SINE MIR 2 182 -80 2994 133 24 43 chr2 21202553 21203133 -229484721 + LTR24B LTR ERV1 1 569 -7 245 191 0 0 chr2 21203137 21203179 -229484675 + MIR SINE MIR 210 251 -11 316 292 47 68 chr2 21204040 21204232 -229483622 - MER5A DNA MER1_type -1 188 1 2430 203 8 35 chr2 21204249 21204737 -229483117 - LTR42 LTR ERVL -18 477 3 234 0 0 0 chr2 21205644 21205670 -229482184 + (T)n Simple_repeat Simple_repeat 1 26 0 2199 120 0 0 chr2 21207266 21207558 -229480296 + AluSc SINE Alu 1 292 -17 304 298 0 0 chr2 21208597 21208681 -229479173 - MIR SINE MIR -84 178 95 22 56 0 0 chr2 21209259 21209295 -229478559 + AT_rich Low_complexity Low_complexity 1 36 0 669 287 19 3 chr2 21209301 21209622 -229478232 + L1MC/D LINE L1 4378 4703 -1443 1027 168 59 49 chr2 21209672 21209958 -229477896 - MER33 DNA MER1_type 0 324 36 711 284 65 64 chr2 21209980 21210679 -229477175 + L1MC/D LINE L1 4745 5447 -761 6789 65 38 9 chr2 21210679 21211860 -229475994 - L1PA8 LINE L1 -13 6159 4968 711 284 65 64 chr2 21211860 21212055 -229475799 + L1MC/D LINE L1 5447 5640 -568 894 142 0 0 chr2 21212183 21212310 -229475544 - AluSq/x SINE Alu -185 127 1 364 123 0 0 chr2 21212352 21212417 -229475437 - L1MB7 LINE L1 -8 6176 6112 2304 110 0 3 chr2 21212417 21212727 -229475127 + AluSx SINE Alu 1 309 -3 1795 180 13 124 chr2 21212772 21213060 -229474794 - LTR42 LTR ERVL -2 493 275 1467 97 65 5 chr2 21213060 21213277 -229474577 + MER30 DNA MER1_type 1 230 0 1795 180 13 124 chr2 21213277 21213454 -229474400 - LTR42 LTR ERVL -220 275 80 2533 209 39 37 chr2 21213495 21213691 -229474163 - L1MB7 LINE L1 -142 6042 5848 1633 173 7 17 chr2 21213691 21213992 -229473862 + AluJb SINE Alu 1 298 -14 2533 209 39 37 chr2 21213992 21214227 -229473627 - L1MB7 LINE L1 -336 5848 5615 2209 124 25 25 chr2 21214227 21214591 -229473263 - THE1B LTR MaLR 0 364 1 2533 209 39 37 chr2 21214591 21214829 -229473025 - L1MB7 LINE L1 -569 5615 5371 250 204 32 21 chr2 21214883 21214976 -229472878 + (TA)n Simple_repeat Simple_repeat 1 94 0 23 0 0 0 chr2 21215249 21215272 -229472582 + AT_rich Low_complexity Low_complexity 1 23 0 2279 147 12 20 chr2 21215393 21215801 -229472053 - MER65A LTR ERV1 -1 444 40 254 61 82 20 chr2 21215827 21215876 -229471978 - MER65B LTR ERV1 -477 54 3 223 376 47 0 chr2 21216369 21216454 -229471400 + L2 LINE L2 3141 3229 -43 186 275 143 11 chr2 21216492 21216583 -229471271 + L2 LINE L2 2566 2668 -646 245 358 57 24 chr2 21216609 21216732 -229471122 + L2 LINE L2 3141 3267 -5 308 279 72 90 chr2 21216874 21217096 -229470758 - MLT1I LTR MaLR -107 302 85 266 269 25 109 chr2 21217189 21217308 -229470546 - L2 LINE L2 -521 2793 2685 468 314 78 30 chr2 21217398 21217813 -229470041 + L1ME3A LINE L1 4805 5239 -907 2655 187 32 5 chr2 21217824 21218390 -229469464 + L1MB5 LINE L1 5583 6163 -11 1048 288 64 28 chr2 21218452 21219127 -229468727 + L1ME3A LINE L1 5237 5938 -232 423 146 65 24 chr2 21219135 21219258 -229468596 + L1MA9 LINE L1 6184 6311 -1 1497 210 144 87 chr2 21219633 21219857 -229467997 + MLT1E1 LTR MaLR 1 211 -443 2003 150 18 29 chr2 21219857 21220198 -229467656 + MER1B DNA MER1_type 1 337 0 1497 210 144 87 chr2 21220198 21220582 -229467272 + MLT1E1 LTR MaLR 211 644 -10 1516 175 25 39 chr2 21220677 21220962 -229466892 + AluJb SINE Alu 1 281 -31 317 256 73 0 chr2 21220964 21221046 -229466808 + L1MC4 LINE L1 6616 6703 -1339 198 0 0 0 chr2 21221508 21221530 -229466324 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 462 293 45 37 chr2 21221576 21221822 -229466032 - L1MEd LINE L1 -4892 1227 980 23 0 0 0 chr2 21222066 21222089 -229465765 + AT_rich Low_complexity Low_complexity 1 23 0 3761 121 27 0 chr2 21222473 21223059 -229464795 - LTR43 LTR ERV1 0 602 1 24 32 0 0 chr2 21223311 21223342 -229464512 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr2 21223435 21223470 -229464384 + AT_rich Low_complexity Low_complexity 1 35 0 15520 127 16 9 chr2 21223503 21224183 -229463671 - Tigger1 DNA MER2_type 0 2418 1744 2290 74 3 6 chr2 21224183 21224494 -229463360 - L1PA10 LINE L1 -6 6162 5853 15520 127 16 9 chr2 21224494 21226215 -229461639 - Tigger1 DNA MER2_type -674 1744 1 4150 134 9 76 chr2 21227693 21227888 -229459966 - L1MA9 LINE L1 -5 6307 6101 2640 55 0 0 chr2 21227888 21228199 -229459655 + AluY SINE Alu 1 311 0 4150 134 9 76 chr2 21228199 21228854 -229459000 - L1MA9 LINE L1 -211 6101 5514 1489 256 85 60 chr2 21228971 21229230 -229458624 - L1ME3A LINE L1 -78 6084 5833 7558 27 9 0 chr2 21229230 21230417 -229457437 - L1PA4 LINE L1 0 6155 4964 1489 256 85 60 chr2 21230417 21230957 -229456897 - L1ME3A LINE L1 -329 5833 5265 950 298 91 19 chr2 21231013 21231869 -229455985 - L1ME3A LINE L1 -955 5191 4274 328 273 87 40 chr2 21231882 21231987 -229455867 - L1ME3A LINE L1 -1922 4224 4108 1783 191 0 3 chr2 21231987 21232296 -229455558 + AluJb SINE Alu 1 308 -4 328 273 87 40 chr2 21232296 21232340 -229455514 - L1ME3A LINE L1 -2038 4108 4068 2096 162 0 20 chr2 21232380 21232725 -229455129 + MER7A DNA MER2_type 11 346 0 392 170 10 70 chr2 21232746 21232878 -229454976 - L1 LINE L1 -2165 3981 3856 6944 60 22 0 chr2 21233083 21234029 -229453825 - L1PA8 LINE L1 -4 6168 5219 315 214 14 0 chr2 21235283 21235353 -229452501 + L1ME1 LINE L1 4656 4726 -1420 1210 215 73 14 chr2 21235356 21236103 -229451751 + L1ME1 LINE L1 4791 5599 -567 1984 148 0 6 chr2 21236110 21236421 -229451433 + AluSx SINE Alu 1 309 -3 1395 195 0 28 chr2 21236428 21236710 -229451144 + AluJo SINE Alu 39 312 0 1478 239 33 32 chr2 21236714 21237183 -229450671 + L1ME1 LINE L1 5599 6021 -145 214 345 50 0 chr2 21237396 21237515 -229450339 + MIR SINE MIR 138 262 0 1980 153 10 61 chr2 21237618 21238029 -229449825 + MLT1B LTR MaLR 1 390 0 4368 56 0 5 chr2 21239355 21239906 -229447948 - L1PA7 LINE L1 0 6154 5607 1789 181 36 12 chr2 21242044 21242380 -229445474 + MSTB1 LTR MaLR 13 356 -76 22 0 0 0 chr2 21242449 21242471 -229445383 + AT_rich Low_complexity Low_complexity 1 22 0 1910 190 30 13 chr2 21242484 21242879 -229444975 + MER65A LTR ERV1 44 445 0 1703 230 18 53 chr2 21242902 21243677 -229444177 + MER65A-int LTR ERV1 29 942 -4050 2140 202 63 35 chr2 21244110 21244820 -229443034 + MER65A-int LTR ERV1 1096 1811 -3060 233 189 0 0 chr2 21244820 21244857 -229442997 - Alu SINE Alu -96 37 1 956 204 75 88 chr2 21244950 21245510 -229442344 + MER65A-int LTR ERV1 1720 3475 -3123 22 0 0 0 chr2 21245600 21245622 -229442232 + AT_rich Low_complexity Low_complexity 1 22 0 662 172 15 130 chr2 21245823 21246033 -229441821 + MER65A-int LTR ERV1 3499 3675 -2923 2209 96 10 7 chr2 21246033 21246199 -229441655 - AluSq SINE Alu -11 302 133 198 0 0 0 chr2 21246199 21246221 -229441633 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2209 96 10 7 chr2 21246221 21246355 -229441499 - AluSq SINE Alu -180 133 1 662 172 15 130 chr2 21246355 21246406 -229441448 + MER65A-int LTR ERV1 3675 3730 -2868 2079 209 78 84 chr2 21246482 21247810 -229440044 + MER65A-int LTR ERV1 3735 5094 -1237 2341 238 61 0 chr2 21247990 21248485 -229439369 + MER65A-int LTR ERV1 3604 4128 -743 1780 232 32 44 chr2 21248483 21249093 -229438761 + MER65A-int LTR ERV1 4231 4871 0 * 2267 147 34 27 chr2 21249093 21249535 -229438319 + MER65A LTR ERV1 1 445 0 316 317 6 82 chr2 21249964 21250147 -229437707 - L1 LINE L1 -1100 5046 4878 1289 274 73 52 chr2 21250211 21251602 -229436252 - L1 LINE L1 -1537 4609 3190 1684 189 3 16 chr2 21251657 21251964 -229435890 + AluJb SINE Alu 3 305 -7 1905 197 43 49 chr2 21252173 21252681 -229435173 - MLT1D LTR MaLR 0 505 1 314 315 114 22 chr2 21252972 21253215 -229434639 - L1MEd LINE L1 -868 1622 1334 281 226 65 21 chr2 21253283 21253376 -229434478 - L1MEd LINE L1 -4862 1257 1161 26 50 0 0 chr2 21253479 21253519 -229434335 + AT_rich Low_complexity Low_complexity 1 40 0 320 344 100 39 chr2 21253814 21254073 -229433781 - L1MEd LINE L1 -5571 548 274 2465 187 6 17 chr2 21254125 21254607 -229433247 + L1MB4 LINE L1 5656 6132 -48 28 0 0 0 chr2 21257284 21257312 -229430542 + AT_rich Low_complexity Low_complexity 1 28 0 41482 56 8 1 chr2 21257312 21263401 -229424453 - L1PA5 LINE L1 -8 6146 11 2165 100 7 7 chr2 21264083 21264383 -229423471 - AluSq SINE Alu -12 301 2 263 293 46 46 chr2 21264440 21264587 -229423267 - MIR SINE MIR -23 185 26 253 313 38 0 chr2 21264557 21264637 -229423217 - MIR SINE MIR -116 146 64 * 2844 227 35 29 chr2 21265046 21265893 -229421961 - L1ME1 LINE L1 -50 6376 5546 2906 239 93 15 chr2 21265972 21266908 -229420946 - L1ME1 LINE L1 -874 5532 4505 210 71 0 0 chr2 21266908 21266936 -229420918 + (TG)n Simple_repeat Simple_repeat 1 28 0 2906 239 93 15 chr2 21266936 21267045 -229420809 - L1ME1 LINE L1 -1901 4505 4406 237 213 25 25 chr2 21267045 21267167 -229420687 + CT-rich Low_complexity Low_complexity 3 124 0 272 167 44 56 chr2 21267203 21267293 -229420561 - L1M LINE L1 -752 5414 5329 681 221 22 31 chr2 21267307 21267472 -229420382 - L1ME1 LINE L1 -1976 4430 4266 198 0 0 0 chr2 21267472 21267494 -229420360 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 681 221 22 31 chr2 21267494 21267550 -229420304 - L1ME1 LINE L1 -2140 4266 4211 826 191 0 0 chr2 21267567 21267708 -229420146 - FRAM SINE Alu -36 140 1 3859 260 39 26 chr2 21267708 21269449 -229418405 - L1ME1 LINE L1 -2185 4221 2459 345 206 149 37 chr2 21269454 21269561 -229418293 - L1ME1 LINE L1 -5051 1358 1240 1234 295 66 43 chr2 21269588 21269751 -229418103 - L1M4c LINE L1 -4075 3063 2905 2218 81 0 14 chr2 21269751 21270055 -229417799 - AluY SINE Alu 0 300 1 1234 295 66 43 chr2 21270055 21270996 -229416858 - L1M4c LINE L1 -4233 2905 1987 1719 143 175 24 chr2 21270996 21271368 -229416486 + MSTA LTR MaLR 1 428 0 8430 153 25 42 chr2 21271370 21272976 -229414878 + MSTA-int LTR MaLR 3 1580 0 1535 176 213 0 chr2 21272976 21273149 -229414705 + MSTA LTR MaLR 1 136 -292 183 42 0 0 chr2 21273149 21273173 -229414681 + (TC)n Simple_repeat Simple_repeat 2 25 0 1535 176 213 0 chr2 21273173 21273352 -229414502 + MSTA LTR MaLR 136 428 0 1234 295 66 43 chr2 21273352 21273740 -229414114 - L1M4c LINE L1 -5150 1988 1390 1894 138 23 129 chr2 21273740 21274219 -229413635 - MSTA LTR MaLR 0 428 1 5743 192 30 14 chr2 21274219 21275262 -229412592 + L1 LINE L1 3359 4384 -1762 1951 162 13 0 chr2 21275262 21275565 -229412289 + AluSx SINE Alu 1 307 -5 5743 192 30 14 chr2 21275565 21275652 -229412202 + L1 LINE L1 4384 4468 -1678 195 42 0 0 chr2 21275652 21275676 -229412178 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 5743 192 30 14 chr2 21275676 21275794 -229412060 + L1 LINE L1 4468 4628 -1518 21 57 0 0 chr2 21275948 21275983 -229411871 + AT_rich Low_complexity Low_complexity 1 35 0 230 232 184 68 chr2 21276498 21276688 -229411166 - L1M4c LINE L1 -6256 599 388 1815 172 17 0 chr2 21277595 21277897 -229409957 - AluSx SINE Alu -1 311 5 431 331 57 0 chr2 21278713 21278837 -229409017 + L2 LINE L2 3142 3272 0 1473 205 13 13 chr2 21279129 21279432 -229408422 + AluJo SINE Alu 1 303 -9 236 274 167 0 chr2 21279592 21279676 -229408178 - L2 LINE L2 -2 3270 3173 348 64 0 0 chr2 21284027 21284074 -229403780 + (TG)n Simple_repeat Simple_repeat 2 48 0 216 182 0 0 chr2 21284074 21284118 -229403736 + (TA)n Simple_repeat Simple_repeat 2 45 0 329 311 36 51 chr2 21284224 21284423 -229403431 - MIR3 SINE MIR -50 158 18 907 304 51 27 chr2 21287386 21287722 -229400132 + L2 LINE L2 2952 3295 -18 342 0 0 0 chr2 21288473 21288511 -229399343 + (CA)n Simple_repeat Simple_repeat 2 39 0 703 183 84 0 chr2 21289839 21289981 -229397873 - MER105 DNA DNA -47 157 4 457 336 0 0 chr2 21289981 21290123 -229397731 + MLT1J1 LTR MaLR 11 152 -294 350 370 37 12 chr2 21290180 21290257 -229397597 + MLT1J2 LTR MaLR 244 318 -132 2256 130 19 30 chr2 21290257 21290625 -229397229 + THE1B LTR MaLR 1 364 0 350 370 37 12 chr2 21290625 21290709 -229397145 + MLT1J2 LTR MaLR 318 409 -41 462 288 21 78 chr2 21291174 21291305 -229396549 + MER5A DNA MER1_type 4 122 -67 2548 65 0 0 chr2 21291305 21291613 -229396241 - AluY SINE Alu -3 308 1 462 288 21 78 chr2 21291613 21291672 -229396182 + MER5A DNA MER1_type 122 183 -6 516 319 125 0 chr2 21292594 21292810 -229395044 + MIR SINE MIR 8 250 -12 470 189 100 0 chr2 21294310 21294400 -229393454 + MLT1E LTR MaLR 1 99 -494 848 198 12 12 chr2 21294405 21294572 -229393282 - FRAM SINE Alu -9 167 1 1218 216 25 85 chr2 21294668 21295033 -229392821 + MLT1E1 LTR MaLR 312 654 0 236 215 103 75 chr2 21295168 21295275 -229392579 - MIR SINE MIR -27 235 126 362 326 15 22 chr2 21295275 21295410 -229392444 - MIR SINE MIR -109 153 20 257 175 140 18 chr2 21295615 21295672 -229392182 - L2 LINE L2 -11 3302 3239 445 254 138 14 chr2 21296678 21296816 -229391038 - MER5A DNA MER1_type -3 186 32 2044 227 85 58 chr2 21297090 21298087 -229389767 - L1MC5 LINE L1 -44 7917 6894 191 61 30 0 chr2 21298106 21298139 -229389715 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 297 276 127 22 chr2 21298294 21298428 -229389426 - L2 LINE L2 -1023 2291 2144 233 317 48 29 chr2 21298680 21298784 -229389070 - MIR SINE MIR -155 107 2 3709 147 30 3 chr2 21299326 21299991 -229387863 + L1MA5A LINE L1 5615 6297 0 342 0 0 0 chr2 21300239 21300277 -229387577 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 480 306 27 7 chr2 21302611 21302758 -229385096 + MIR3 SINE MIR 54 203 -5 370 171 34 0 chr2 21303017 21303105 -229384749 + GA-rich Low_complexity Low_complexity 2 92 0 2038 75 32 0 chr2 21303153 21303431 -229384423 + L1PA8 LINE L1 5886 6172 0 186 191 0 0 chr2 21303668 21303710 -229384144 + CT-rich Low_complexity Low_complexity 3 44 0 290 219 27 41 chr2 21304515 21304588 -229383266 + MER112 DNA MER1_type 178 249 -11 240 286 76 76 chr2 21304795 21305005 -229382849 + MLT1K LTR MaLR 293 502 -86 6054 187 94 102 chr2 21305104 21307284 -229380570 - L1MCa LINE L1 -4241 2185 22 424 315 41 20 chr2 21307358 21307504 -229380350 - MIR SINE MIR -95 167 19 376 284 169 11 chr2 21308463 21308646 -229379208 + L2 LINE L2 3102 3313 0 538 92 0 0 chr2 21309024 21309100 -229378754 + AluSc SINE Alu 226 301 -8 1593 187 0 31 chr2 21312572 21312891 -229374963 - AluJo SINE Alu 0 310 1 2199 120 0 0 chr2 21313193 21313501 -229374353 + AluY SINE Alu 1 308 -3 888 275 13 8 chr2 21314766 21315002 -229372852 + MIR SINE MIR 1 237 -25 324 297 176 17 chr2 21315143 21315464 -229372390 + LTR33A LTR ERVL 292 523 0 279 79 0 0 chr2 21318438 21318476 -229369378 + (TTC)n Simple_repeat Simple_repeat 1 38 0 6531 77 16 8 chr2 21318476 21320164 -229367690 - L1PA7 LINE L1 -26 6128 4435 * 7213 99 4 30 chr2 21320149 21320754 -229367100 + L1P LINE L1 1672 2292 -3854 1583 117 0 0 chr2 21320754 21320967 -229366887 + AluSc SINE Alu 71 283 -26 7213 99 4 30 chr2 21320967 21320980 -229366874 + L1P LINE L1 2292 2304 -3842 188 35 35 0 chr2 21320980 21321009 -229366845 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 7213 99 4 30 chr2 21321009 21321513 -229366341 + L1P LINE L1 2304 2765 -3381 267 327 128 29 chr2 21321518 21321799 -229366055 - L2 LINE L2 -962 2352 2044 192 333 51 0 chr2 21321807 21321924 -229365930 - L2 LINE L2 -1508 1806 1684 293 293 140 57 chr2 21322247 21322476 -229365378 - L2 LINE L2 -42 3230 2983 503 255 28 28 chr2 21322609 21322754 -229365100 - MER58B DNA MER1_type -1 340 196 1688 222 59 61 chr2 21322756 21323382 -229364472 + MER92B LTR ERV1 1 625 -11 1041 183 59 0 chr2 21323403 21323589 -229364265 - MER58B DNA MER1_type -144 197 1 419 307 9 9 chr2 21323637 21323751 -229364103 - L2 LINE L2 -1 3312 3199 353 43 0 0 chr2 21323767 21323813 -229364041 + MADE1 DNA Mariner 35 80 0 371 360 25 5 chr2 21323978 21324178 -229363676 - MARNA DNA Mariner -100 486 283 1123 217 33 79 chr2 21324280 21324621 -229363233 + MLT1A2 LTR MaLR 1 323 -51 2246 89 0 7 chr2 21324621 21324914 -229362940 + AluY SINE Alu 1 291 -20 1123 217 33 79 chr2 21324914 21324964 -229362890 + MLT1A2 LTR MaLR 323 374 0 199 349 79 16 chr2 21325824 21325950 -229361904 - L2 LINE L2 -1 3271 3138 474 241 55 65 chr2 21326776 21326975 -229360879 - MIR3 SINE MIR -7 201 5 212 227 213 85 chr2 21327134 21327275 -229360579 + L2 LINE L2 3150 3308 -5 180 327 75 19 chr2 21327565 21327672 -229360182 - L2 LINE L2 0 3313 3201 410 277 76 113 chr2 21328841 21329195 -229358659 - L3 LINE CR1 -177 1400 1060 29 78 0 0 chr2 21331884 21331948 -229355906 + AT_rich Low_complexity Low_complexity 1 64 0 279 0 0 0 chr2 21332135 21332166 -229355688 + (CA)n Simple_repeat Simple_repeat 2 32 0 2382 114 39 3 chr2 21332166 21332525 -229355329 + THE1C LTR MaLR 2 373 -2 235 197 53 26 chr2 21332538 21332614 -229355240 - L1MC4 LINE L1 -1339 6703 6626 7067 114 11 7 chr2 21332641 21333328 -229354526 - L1PA8 LINE L1 -3 6169 5486 2324 84 3 3 chr2 21333328 21333625 -229354229 - AluY SINE Alu -14 297 1 7067 114 11 7 chr2 21333625 21334835 -229353019 - L1PA8 LINE L1 -686 5486 4278 213 244 0 0 chr2 21335219 21335260 -229352594 + L2 LINE L2 3219 3259 -13 287 358 29 7 chr2 21337277 21337414 -229350440 + L3 LINE CR1 651 790 -787 584 320 24 10 chr2 21337425 21337631 -229350223 - MIR SINE MIR -11 251 43 220 360 174 21 chr2 21337734 21337976 -229349878 + L3 LINE CR1 900 1178 -399 372 290 30 38 chr2 21338116 21338247 -229349607 - L2 LINE L2 -1 3271 3142 2071 169 6 0 chr2 21338285 21338629 -229349225 - MER7A DNA MER2_type -1 345 2 468 320 63 80 chr2 21338694 21339059 -229348795 + L3 LINE CR1 1204 1562 -15 185 281 31 31 chr2 21339575 21339639 -229348215 + MIR3 SINE MIR 97 160 -48 283 349 54 8 chr2 21339679 21339808 -229348046 - MER5B DNA MER1_type -37 141 7 269 297 0 0 chr2 21339803 21339867 -229347987 + MIR3 SINE MIR 145 208 0 * 252 0 0 0 chr2 21339896 21339924 -229347930 + (CA)n Simple_repeat Simple_repeat 2 29 0 243 0 0 0 chr2 21339930 21339957 -229347897 + (TG)n Simple_repeat Simple_repeat 2 28 0 1953 175 23 6 chr2 21341633 21342037 -229345817 - MLT2B1 LTR ERVL -64 456 1 295 281 167 9 chr2 21342208 21342322 -229345532 - MIR SINE MIR -82 180 49 961 287 113 29 chr2 21343886 21344371 -229343483 - MLT1H1 LTR MaLR 0 555 30 221 274 14 0 chr2 21345311 21345384 -229342470 + (TA)n Simple_repeat Simple_repeat 2 75 0 235 263 132 13 chr2 21345845 21345921 -229341933 + MIR SINE MIR 96 180 -82 804 189 77 12 chr2 21346912 21347165 -229340689 + MER33 DNA MER1_type 1 268 -56 20510 159 20 14 chr2 21347165 21354790 -229333064 - L1MA1 LINE L1 -19 7702 16 549 117 21 0 chr2 21354796 21354890 -229332964 + MER33 DNA MER1_type 217 312 -12 474 348 52 4 chr2 21355993 21356226 -229331628 + MIR SINE MIR 18 261 -1 922 271 105 56 chr2 21356276 21356686 -229331168 - LTR16A LTR ERVL 0 450 21 961 273 164 25 chr2 21357483 21358043 -229329811 - HAL1 LINE L1 -21 2486 1849 862 181 0 0 chr2 21358045 21358224 -229329630 - AluSc SINE Alu 0 313 135 739 240 20 15 chr2 21358299 21358495 -229329359 - HAL1 LINE L1 -739 1768 1572 382 311 89 26 chr2 21358496 21358766 -229329088 - HAL1 LINE L1 -2208 299 13 433 289 107 75 chr2 21358770 21359530 -229328324 - HAL1 LINE L1 -947 1560 777 264 306 0 0 chr2 21359598 21359660 -229328194 - HAL1 LINE L1 -1859 648 587 821 304 68 42 chr2 21359701 21360155 -229327699 - HAL1 LINE L1 -2029 478 13 346 335 83 53 chr2 21361096 21361312 -229326542 - L3 LINE CR1 -128 1449 1241 2902 87 16 3 chr2 21361312 21361678 -229326176 - THE1C LTR MaLR -3 372 2 346 335 83 53 chr2 21361678 21361929 -229325925 - L3 LINE CR1 -336 1241 968 4670 36 0 0 chr2 21362071 21362598 -229325256 - L1PA4 LINE L1 0 6155 5629 1254 56 6 0 chr2 21362598 21362760 -229325094 + L1P LINE L1 3830 3992 -2154 211 282 97 57 chr2 21363471 21363595 -229324259 - MIR SINE MIR -68 194 66 2239 105 23 0 chr2 21363618 21363956 -229323898 - AluSq SINE Alu 0 345 1 290 282 22 74 chr2 21365391 21365539 -229322315 - MIR3 SINE MIR -90 118 10 24 0 0 0 chr2 21365645 21365669 -229322185 + AT_rich Low_complexity Low_complexity 1 24 0 831 252 58 13 chr2 21366502 21366728 -229321126 - MIR SINE MIR -26 236 1 664 284 39 10 chr2 21368176 21368384 -229319470 - MIR SINE MIR -12 250 37 339 164 82 8 chr2 21368755 21368877 -229318977 + (TA)n Simple_repeat Simple_repeat 1 131 0 209 304 0 0 chr2 21369117 21369163 -229318691 + L2 LINE L2 3137 3182 -90 21 0 0 0 chr2 21370274 21370295 -229317559 + AT_rich Low_complexity Low_complexity 1 21 0 507 270 82 36 chr2 21370495 21370691 -229317163 - MIR3 SINE MIR -1 207 3 1148 229 13 4 chr2 21370966 21371193 -229316661 + MLT1A1 LTR MaLR 1 229 -136 187 355 36 18 chr2 21371467 21371577 -229316277 - L2 LINE L2 -222 3050 2939 1459 341 127 26 chr2 21372313 21373507 -229314347 + L2 LINE L2 1541 2855 -459 477 217 0 126 chr2 21373507 21373650 -229314204 + MER63 DNA MER1_type 3 753 -83 706 355 38 16 chr2 21373733 21374158 -229313696 + L2 LINE L2 2857 3290 -23 1146 276 86 46 chr2 21374694 21375172 -229312682 + LTR33 LTR ERVL 6 502 -19 211 238 88 62 chr2 21375410 21375490 -229312364 + L2 LINE L2 2532 2613 -701 2419 143 76 0 chr2 21375572 21375965 -229311889 - MSTA LTR MaLR 0 428 6 477 376 64 51 chr2 21376057 21376577 -229311277 + L2 LINE L2 2743 3267 -5 229 200 0 17 chr2 21376785 21376845 -229311009 - L1ME4a LINE L1 -103 6018 5960 2656 43 0 0 chr2 21377253 21377558 -229310296 + AluY SINE Alu 1 305 -6 245 143 0 20 chr2 21377641 21377690 -229310164 + (TG)n Simple_repeat Simple_repeat 1 48 0 216 0 0 0 chr2 21378761 21378785 -229309069 + (A)n Simple_repeat Simple_repeat 1 24 0 447 327 99 9 chr2 21379310 21379521 -229308333 + MIR SINE MIR 15 244 -18 944 222 72 19 chr2 21380248 21380455 -229307399 - MER20 DNA MER1_type 0 219 2 2131 119 3 3 chr2 21380926 21381220 -229306634 - AluSq SINE Alu -19 294 1 329 356 56 19 chr2 21383546 21383706 -229304148 + L2 LINE L2 3104 3269 -3 349 294 83 44 chr2 21385715 21385895 -229301959 + MIR3 SINE MIR 19 205 -3 233 307 34 23 chr2 21386170 21386258 -229301596 - L2 LINE L2 -45 3268 3180 191 383 0 25 chr2 21386525 21386606 -229301248 + MIR SINE MIR 19 97 -111 225 233 17 17 chr2 21388218 21388278 -229299576 + MIR3 SINE MIR 112 171 -37 209 291 37 52 chr2 21388375 21388509 -229299345 - L3b LINE CR1 -140 1443 1312 183 42 0 0 chr2 21389431 21389455 -229298399 + (A)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr2 21389890 21389918 -229297936 + AT_rich Low_complexity Low_complexity 1 28 0 368 261 22 22 chr2 21391514 21391606 -229296248 - MIR SINE MIR -100 108 17 183 313 102 39 chr2 21391730 21391858 -229295996 + MIR3 SINE MIR 11 146 -62 1337 150 0 33 chr2 21392276 21392489 -229295365 - AluJo SINE Alu -22 290 85 488 267 59 30 chr2 21392489 21392624 -229295230 - AluJ SINE Alu -62 250 112 695 215 0 0 chr2 21392624 21392745 -229295109 - AluJ SINE Alu -178 124 4 198 333 58 58 chr2 21393529 21393649 -229294205 + L2 LINE L2 3111 3230 -42 246 310 42 0 chr2 21394032 21394103 -229293751 + MIR SINE MIR 58 131 -131 225 0 0 0 chr2 21397709 21397734 -229290120 + (TC)n Simple_repeat Simple_repeat 2 26 0 1783 166 10 23 chr2 21397755 21398063 -229289791 + AluJb SINE Alu 3 306 -6 27 49 0 0 chr2 21398308 21398349 -229289505 + AT_rich Low_complexity Low_complexity 1 41 0 651 276 79 47 chr2 21398578 21398683 -229289171 - HAL1 LINE L1 -8 2499 2399 1852 201 174 42 chr2 21398683 21399236 -229288618 - MLT1E2 LTR MaLR 0 626 1 651 276 79 47 chr2 21399236 21399558 -229288296 - HAL1 LINE L1 -108 2399 2058 773 269 111 38 chr2 21399623 21399965 -229287889 - HAL1 LINE L1 -587 1920 1554 1230 210 105 68 chr2 21399966 21400420 -229287434 - HAL1 LINE L1 -1938 569 94 2472 170 34 12 chr2 21400420 21400837 -229287017 - MSTB LTR MaLR 0 426 1 1230 210 105 68 chr2 21400837 21400867 -229286987 - HAL1 LINE L1 -2413 94 67 1759 149 4 25 chr2 21401758 21402039 -229285815 + AluSx SINE Alu 1 275 -37 219 36 0 0 chr2 21402048 21402076 -229285778 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 540 352 40 0 chr2 21402508 21402707 -229285147 + MIR SINE MIR 48 254 -8 260 284 74 0 chr2 21403714 21403795 -229284059 + L2 LINE L2 2959 3045 -227 216 86 0 0 chr2 21404360 21404395 -229283459 + (A)n Simple_repeat Simple_repeat 1 35 0 23 33 0 0 chr2 21405037 21405067 -229282787 + AT_rich Low_complexity Low_complexity 1 30 0 186 375 106 47 chr2 21405458 21405778 -229282076 + L2 LINE L2 2890 3228 -44 635 273 53 49 chr2 21405932 21406196 -229281658 + MARNA DNA Mariner 159 423 -163 225 384 20 20 chr2 21406301 21406400 -229281454 + MIR SINE MIR 2 100 -162 379 269 7 57 chr2 21406584 21406706 -229281148 - MIR SINE MIR -118 144 28 2468 69 0 7 chr2 21406706 21407010 -229280844 - AluY SINE Alu -9 302 1 379 269 7 57 chr2 21407010 21407028 -229280826 - MIR SINE MIR -234 28 11 822 318 28 13 chr2 21407355 21407673 -229280181 + L3 LINE CR1 1254 1576 -1 266 253 72 12 chr2 21408027 21408110 -229279744 - MIR SINE MIR -66 196 109 491 215 76 38 chr2 21408697 21408855 -229278999 + L1ME3A LINE L1 5778 5941 -229 713 283 123 13 chr2 21409886 21410186 -229277668 + L2 LINE L2 2967 3299 -14 2007 301 44 11 chr2 21411246 21411888 -229275966 - MLT2F LTR ERVL 0 663 1 296 236 87 87 chr2 21411888 21412049 -229275805 - Ricksha DNA DNA -2900 346 186 1538 250 165 50 chr2 21412247 21412871 -229274983 + MER21B LTR ERV1 19 714 -149 356 0 23 0 chr2 21412889 21412933 -229274921 + (CA)n Simple_repeat Simple_repeat 2 46 0 1958 281 65 20 chr2 21413018 21413727 -229274127 - ERVL-F LTR ERVL -331 5433 4693 10325 195 73 21 chr2 21413759 21416913 -229270941 + L1MB3 LINE L1 20 3345 -3037 1913 64 0 26 chr2 21416934 21417200 -229270654 + L1PA13 LINE L1 5898 6156 -7 898 73 156 84 chr2 21417333 21417355 -229270499 + L1PA16 LINE L1 5975 5994 -172 186 43 0 0 chr2 21417355 21417378 -229270476 + (GGGA)n Simple_repeat Simple_repeat 1 23 0 898 73 156 84 chr2 21417378 21417534 -229270320 + L1PA16 LINE L1 5994 6166 0 * 1774 229 71 4 chr2 21417531 21418068 -229269786 + L1MB3 LINE L1 3427 3999 -2383 283 291 27 0 chr2 21469075 21469185 -229218669 + (TA)n Simple_repeat Simple_repeat 2 114 0 5941 211 34 16 chr2 21469285 21471668 -229216186 + L1MB3 LINE L1 3994 6417 -2 795 271 84 16 chr2 21471682 21471933 -229215921 - ERVL-F LTR ERVL -1121 4643 4376 * 3038 243 34 3 chr2 21471924 21472598 -229215256 - ERVL-F LTR ERVL -2231 3533 2839 412 281 146 12 chr2 21472613 21472777 -229215077 - MIR SINE MIR -3 259 74 5029 291 45 11 chr2 21472893 21474694 -229213160 - ERVL-F LTR ERVL -2996 2768 853 1770 162 11 43 chr2 21474807 21475178 -229212676 - L1MB8 LINE L1 -200 5978 5620 275 285 114 32 chr2 21475194 21475352 -229212502 - MIR3 SINE MIR -37 171 1 537 321 146 36 chr2 21477766 21478333 -229209521 - L2 LINE L2 -191 3081 2455 2249 106 26 32 chr2 21478334 21478711 -229209143 + THE1C LTR MaLR 1 375 0 24 53 0 0 chr2 21478722 21478760 -229209094 + AT_rich Low_complexity Low_complexity 1 38 0 1935 116 7 27 chr2 21479257 21479575 -229208279 + AluSx SINE Alu 1 312 0 336 329 91 30 chr2 21480627 21480858 -229206996 - L3 LINE CR1 -673 904 660 232 179 80 86 chr2 21480863 21481014 -229206840 + MER113 DNA MER1_type? 4 153 -368 237 132 0 0 chr2 21482582 21482620 -229205234 + (TAG)n Simple_repeat Simple_repeat 1 38 0 305 250 79 0 chr2 21482815 21482891 -229204963 - MIR SINE MIR -70 192 111 234 315 130 12 chr2 21484825 21484986 -229202868 + MIR SINE MIR 60 238 -24 993 114 13 0 chr2 21486103 21486252 -229201602 - L1PA11 LINE L1 -11 6163 6013 1051 313 67 38 chr2 21486291 21486710 -229201144 + LTR16A LTR ERVL 23 446 -4 223 214 0 18 chr2 21487251 21487307 -229200547 + (TA)n Simple_repeat Simple_repeat 1 55 0 382 267 75 107 chr2 21487343 21487718 -229200136 + L1ME4a LINE L1 5602 5964 -157 245 279 0 0 chr2 21487720 21487788 -229200066 + (TA)n Simple_repeat Simple_repeat 1 68 0 338 231 51 0 chr2 21487794 21487872 -229199982 - L1MC4 LINE L1 -1347 6695 6614 333 311 0 0 chr2 21487808 21487898 -229199956 + L1MC4 LINE L1 6614 6703 -1339 * 311 301 0 0 chr2 21487912 21487995 -229199859 - L1MC4 LINE L1 -1346 6696 6614 183 80 0 0 chr2 21487995 21488020 -229199834 + (TA)n Simple_repeat Simple_repeat 1 25 0 283 216 104 40 chr2 21488020 21488145 -229199709 + L1ME4a LINE L1 5935 6067 -54 378 340 102 48 chr2 21488149 21488817 -229199037 + L2 LINE L2 961 1664 -1650 469 284 13 23 chr2 21489208 21489485 -229198369 - L1MC4 LINE L1 -339 5831 5644 1454 226 25 67 chr2 21489995 21490429 -229197425 + LTR52 LTR ERVL 6 421 0 23 0 0 0 chr2 21490620 21490643 -229197211 + AT_rich Low_complexity Low_complexity 1 23 0 1499 190 36 30 chr2 21490907 21491270 -229196584 + MLT1A1 LTR MaLR 1 365 0 1148 58 0 0 chr2 21491571 21491710 -229196144 - MER85 DNA T2_type 0 139 1 426 307 93 42 chr2 21492439 21492654 -229195200 + MIR SINE MIR 3 228 -34 1287 138 55 0 chr2 21494154 21494372 -229193482 + MER30 DNA MER1_type 1 230 0 1724 162 76 15 chr2 21494460 21494854 -229193000 + L1MB7 LINE L1 5743 6160 -24 525 292 0 0 chr2 21495874 21496011 -229191843 - MIR SINE MIR -45 217 81 253 344 131 55 chr2 21496812 21497233 -229190621 - L2 LINE L2 -431 2883 2431 199 326 114 38 chr2 21497940 21498009 -229189845 + L2 LINE L2 2392 2454 -860 2115 125 90 0 chr2 21498009 21498353 -229189501 - THE1C LTR MaLR 0 375 1 199 326 114 38 chr2 21498353 21498519 -229189335 + L2 LINE L2 2454 2645 -669 229 302 47 35 chr2 21498563 21498649 -229189205 - L2 LINE L2 -37 3276 3190 205 310 81 0 chr2 21499056 21499143 -229188711 - L2 LINE L2 -748 2566 2473 1563 178 20 10 chr2 21499619 21499917 -229187937 + MER2 DNA MER2_type 32 332 -13 27 0 0 0 chr2 21500287 21500314 -229187540 + AT_rich Low_complexity Low_complexity 1 27 0 263 347 76 31 chr2 21500331 21500622 -229187232 - L1MC/D LINE L1 -2001 5790 5487 464 336 67 34 chr2 21500977 21501471 -229186383 - L1MC/D LINE L1 -3387 2742 2233 251 296 6 62 chr2 21501569 21501731 -229186123 - L1MC/D LINE L1 -5005 1114 962 815 161 0 7 chr2 21502105 21502242 -229185612 - FRAM SINE Alu -10 166 31 204 277 0 21 chr2 21503145 21503192 -229184662 - MIR3 SINE MIR -20 188 143 885 317 35 0 chr2 21504231 21504515 -229183339 - LTR33 LTR ERVL -222 299 6 239 269 50 50 chr2 21504751 21504870 -229182984 - MIR SINE MIR -131 131 13 205 65 32 0 chr2 21505314 21505345 -229182509 + L2 LINE L2 1380 1411 -1903 192 250 0 21 chr2 21505447 21505495 -229182359 - L2 LINE L2 -8 3264 3218 225 305 29 29 chr2 21506549 21506654 -229181200 + MIR SINE MIR 75 179 -83 190 306 82 41 chr2 21507230 21507328 -229180526 + MIR SINE MIR 7 108 -154 696 306 119 25 chr2 21508392 21508752 -229179102 - LTR16C LTR ERVL 0 491 98 404 309 101 39 chr2 21509222 21509429 -229178425 + MIR SINE MIR 29 248 -14 234 0 0 0 chr2 21509441 21509467 -229178387 + (CAT)n Simple_repeat Simple_repeat 3 28 0 1173 166 76 0 chr2 21509700 21509911 -229177943 - MER30 DNA MER1_type 0 230 4 206 289 52 31 chr2 21510440 21510537 -229177317 + MIR SINE MIR 1 99 -163 458 296 32 0 chr2 21510559 21510684 -229177170 + L2 LINE L2 3182 3310 -3 186 208 0 21 chr2 21510682 21510730 -229177124 + MIR SINE MIR 93 139 -69 * 325 318 32 0 chr2 21511341 21511467 -229176387 + MIR SINE MIR 120 249 -13 246 324 193 14 chr2 21512306 21512451 -229175403 - L2 LINE L2 -87 3185 3015 221 171 0 0 chr2 21513177 21513218 -229174636 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 188 194 0 0 chr2 21513473 21513504 -229174350 + L2 LINE L2 3265 3295 -18 415 269 81 27 chr2 21517534 21517683 -229170171 - L3 LINE CR1 -14 1563 1407 988 247 93 0 chr2 21520330 21520367 -229167487 - MER33 DNA MER1_type -2265 320 288 1165 126 10 20 chr2 21520367 21520565 -229167289 + L1PA14 LINE L1 5964 6159 -2 988 247 93 0 chr2 21520565 21520829 -229167025 - MER33 DNA MER1_type -2297 288 1 1959 143 18 47 chr2 21520845 21521231 -229166623 - THE1C LTR MaLR 0 375 1 21 57 0 0 chr2 21522178 21522213 -229165641 + AT_rich Low_complexity Low_complexity 1 35 0 437 177 0 0 chr2 21522356 21522435 -229165419 - L1P LINE L1 -905 5241 5163 3059 82 58 16 chr2 21522435 21522886 -229164968 + L1PA10 LINE L1 5683 6152 -16 273 257 46 46 chr2 21523693 21523802 -229164052 + MER103 DNA DNA 1 109 -57 409 256 0 0 chr2 21524526 21524616 -229163238 + L3 LINE CR1 480 569 -1008 387 0 0 0 chr2 21524890 21524933 -229162921 + (TG)n Simple_repeat Simple_repeat 1 43 0 1285 246 62 10 chr2 21525286 21525672 -229162182 + L1ME LINE L1 5397 5802 -319 942 227 63 54 chr2 21525734 21526175 -229161679 + L1MC5 LINE L1 7502 7946 -15 208 237 85 76 chr2 21526994 21527112 -229160742 + MIR SINE MIR 105 223 -39 197 207 0 17 chr2 21527143 21527201 -229160653 + CT-rich Low_complexity Low_complexity 1 57 0 22 35 0 0 chr2 21527400 21527429 -229160425 + AT_rich Low_complexity Low_complexity 1 29 0 210 37 0 0 chr2 21529581 21529608 -229158246 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1917 130 14 4 chr2 21529622 21529899 -229157955 - AluSx SINE Alu -30 282 3 4535 190 30 1 chr2 21530118 21531214 -229156640 - L1P4 LINE L1 -684 5482 4356 923 206 0 0 chr2 21531213 21531388 -229156466 - L1P4 LINE L1 -2341 3805 3631 * 329 310 173 28 chr2 21531945 21532229 -229155625 - MLT1H LTR MaLR -16 533 209 305 232 61 12 chr2 21532276 21532358 -229155496 + L1 LINE L1 3072 3157 -2989 1863 155 13 7 chr2 21532425 21532729 -229155125 - AluJb SINE Alu -6 306 1 1323 188 25 43 chr2 21533648 21533883 -229153971 + AluJo SINE Alu 29 260 -52 3515 117 31 13 chr2 21533883 21534438 -229153416 - MER61E LTR ERV1 -4 565 1 1323 188 25 43 chr2 21534438 21534484 -229153370 + AluJo SINE Alu 260 305 -7 317 239 35 26 chr2 21535001 21535114 -229152740 - MLT1H-int LTR MaLR -1269 102 2 421 240 100 60 chr2 21535117 21535448 -229152406 - MLT1H LTR MaLR -2 550 108 476 207 95 0 chr2 21535851 21535967 -229151887 - MER94 DNA DNA -2 132 6 255 271 0 14 chr2 21535977 21536047 -229151807 + HAL1b LINE L1 392 460 -888 3084 124 50 2 chr2 21536131 21536613 -229151241 - MER84 LTR ERV1 0 507 3 4021 120 14 14 chr2 21537065 21537699 -229150155 + MER41B LTR ERV1 2 635 0 277 280 141 49 chr2 21538000 21538772 -229149082 + L1 LINE L1 2205 3047 -3099 23 0 0 0 chr2 21540225 21540248 -229147606 + AT_rich Low_complexity Low_complexity 1 23 0 25 83 0 0 chr2 21540274 21540334 -229147520 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr2 21540665 21540687 -229147167 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 21542498 21542519 -229145335 + AT_rich Low_complexity Low_complexity 1 21 0 1772 162 6 19 chr2 21542930 21543245 -229144609 + AluJb SINE Alu 1 311 -1 1659 156 27 21 chr2 21543877 21544252 -229143602 + MER1B DNA MER1_type 1 337 -2 646 152 0 0 chr2 21544462 21544567 -229143287 - L1MA10 LINE L1 -25 6309 6205 1536 152 116 27 chr2 21544690 21545025 -229142829 - MLT1A1 LTR MaLR 0 365 1 396 279 54 0 chr2 21545025 21545172 -229142682 - L1M4 LINE L1 -2489 3657 3503 21 36 0 0 chr2 21546735 21546763 -229141091 + AT_rich Low_complexity Low_complexity 1 28 0 340 303 11 110 chr2 21547977 21548241 -229139613 - L1M4 LINE L1 -2296 3850 3613 200 322 0 0 chr2 21548686 21548773 -229139081 + T-rich Low_complexity Low_complexity 1 87 0 21 0 0 0 chr2 21549067 21549088 -229138766 + AT_rich Low_complexity Low_complexity 1 21 0 14088 156 24 7 chr2 21549102 21549882 -229137972 - Tigger1 DNA MER2_type 0 2418 1653 2840 189 136 42 chr2 21549882 21550637 -229137217 - LTR1B LTR ERV1 0 826 1 14088 156 24 7 chr2 21550637 21552234 -229135620 - Tigger1 DNA MER2_type -765 1653 1 531 348 81 45 chr2 21552333 21552524 -229135330 - HAL1 LINE L1 -904 1603 1420 2179 123 0 0 chr2 21552524 21552817 -229135037 + AluSx SINE Alu 3 295 -17 531 348 81 45 chr2 21552817 21553116 -229134738 - HAL1 LINE L1 -1087 1420 1086 3105 184 40 17 chr2 21553116 21553810 -229134044 - MER67C LTR ERV1 0 710 1 531 348 81 45 chr2 21553810 21553902 -229133952 - HAL1 LINE L1 -1421 1086 999 267 306 44 39 chr2 21554469 21554649 -229133205 + MLT1L LTR MaLR 98 278 -337 305 340 66 23 chr2 21556110 21556366 -229131488 - MLT1J1 LTR MaLR -4 442 176 367 179 83 12 chr2 21556490 21556574 -229131280 - MLT1J2 LTR MaLR -360 90 1 250 322 41 85 chr2 21557222 21557492 -229130362 + MIR SINE MIR 5 262 0 204 306 97 28 chr2 21557792 21557864 -229129990 - L2 LINE L2 -38 3234 3158 652 323 132 40 chr2 21560455 21561052 -229126802 - L3 LINE CR1 -396 1181 530 1148 161 256 25 chr2 21562726 21563000 -229124854 - MER1B DNA MER1_type 0 337 1 418 290 29 104 chr2 21563772 21564158 -229123696 - L1M4 LINE L1 -3002 3144 2788 804 262 78 38 chr2 21564811 21565208 -229122646 - L1ME3 LINE L1 -80 6082 5670 1442 211 32 7 chr2 21566534 21566690 -229121164 - AluJo SINE Alu -20 292 124 225 0 0 0 chr2 21566690 21566715 -229121139 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1442 211 32 7 chr2 21566715 21566843 -229121011 - AluJo SINE Alu -188 124 1 1544 265 25 29 chr2 21568729 21569246 -229118608 + MLT2F LTR ERVL 147 661 -2 412 149 81 0 chr2 21569410 21569484 -229118370 + MIR SINE MIR 183 262 0 633 281 101 46 chr2 21569495 21569823 -229118031 + L3 LINE CR1 946 1291 -286 372 306 38 50 chr2 21572258 21572418 -229115436 + MIR SINE MIR 26 183 -79 959 291 96 49 chr2 21572588 21573221 -229114633 + HAL1 LINE L1 381 1043 -1464 238 190 63 25 chr2 21573599 21573678 -229114176 + L1MC4 LINE L1 6620 6701 -1341 310 286 43 25 chr2 21573917 21574118 -229113736 + L1MC/D LINE L1 5428 5634 -528 185 224 10 31 chr2 21575577 21575601 -229112253 + (TA)n Simple_repeat Simple_repeat 1 24 -72 13372 136 39 16 chr2 21575601 21577957 -229109897 - Tigger1 DNA MER2_type -4 2414 5 185 224 10 31 chr2 21577957 21578030 -229109824 + (TA)n Simple_repeat Simple_repeat 24 96 0 3624 70 12 2 chr2 21578115 21578604 -229109250 + LTR3b LTR ERVK 3 496 -4 283 160 29 14 chr2 21579365 21579509 -229108345 + CT-rich Low_complexity Low_complexity 1 146 0 307 237 97 0 chr2 21579573 21579666 -229108188 - MER91C DNA MER1_type -1 139 38 208 356 14 0 chr2 21579862 21579935 -229107919 - MIR3 SINE MIR -13 195 122 475 321 46 28 chr2 21583019 21583237 -229104617 - MIR SINE MIR -35 227 6 205 370 17 34 chr2 21583292 21583411 -229104443 + L2 LINE L2 2967 3083 -189 218 218 18 18 chr2 21584915 21584970 -229102884 + GA-rich Low_complexity Low_complexity 2 56 0 292 355 30 18 chr2 21585035 21585201 -229102653 + MIR SINE MIR 19 186 -76 22 56 0 0 chr2 21585516 21585552 -229102302 + AT_rich Low_complexity Low_complexity 1 36 0 444 268 102 17 chr2 21586087 21586322 -229101532 - MLT1L LTR MaLR -349 266 12 1322 216 10 80 chr2 21586839 21587238 -229100616 + MLT1A2 LTR MaLR 4 374 0 512 161 9 45 chr2 21588160 21588272 -229099582 - L1MC1 LINE L1 -119 6214 6107 1382 198 80 0 chr2 21588276 21588428 -229099426 - AluJo SINE Alu -28 284 146 180 0 0 0 chr2 21588428 21588448 -229099406 + (TG)n Simple_repeat Simple_repeat 1 20 0 1382 198 80 0 chr2 21588448 21588558 -229099296 - AluJo SINE Alu -166 146 1 502 162 9 72 chr2 21588793 21588904 -229098950 + MER63 DNA MER1_type 678 781 -280 253 309 213 7 chr2 21590795 21590931 -229096923 + L2 LINE L2 3094 3257 -15 399 311 34 53 chr2 21591466 21591675 -229096179 + MIR3 SINE MIR 3 207 -1 198 239 65 0 chr2 21593761 21593807 -229094047 + L2 LINE L2 3257 3305 -8 460 331 49 37 chr2 21593831 21594076 -229093778 + MIR SINE MIR 13 260 -2 26 0 0 0 chr2 21595061 21595087 -229092767 + AT_rich Low_complexity Low_complexity 1 26 0 755 214 102 102 chr2 21595914 21596066 -229091788 + L1M4 LINE L1 3842 3993 -2153 338 159 0 0 chr2 21596066 21596129 -229091725 + L1PA16 LINE L1 6095 6157 -9 755 214 102 102 chr2 21596129 21596616 -229091238 + L1M4 LINE L1 3992 4481 -1665 757 308 19 5 chr2 21596796 21597041 -229090813 - MIR SINE MIR -10 252 6 992 170 75 85 chr2 21598429 21598743 -229089111 + MSTA LTR MaLR 1 388 -38 1956 164 0 3 chr2 21598743 21599054 -229088800 - AluJb SINE Alu -2 310 1 992 170 75 85 chr2 21599054 21599093 -229088761 + MSTA LTR MaLR 388 426 0 1608 206 19 25 chr2 21599154 21599513 -229088341 + MLT1A1 LTR MaLR 5 361 -4 440 330 33 14 chr2 21599622 21599834 -229088020 - MIR SINE MIR 0 262 47 677 199 12 2 chr2 21600284 21600565 -229087289 + MLT1A1 LTR MaLR 29 363 -2 204 67 0 0 chr2 21600972 21601002 -229086852 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 254 283 0 0 chr2 21601038 21601091 -229086763 + MIR SINE MIR 51 103 -159 187 247 144 52 chr2 21601466 21601563 -229086291 + L2 LINE L2 3208 3313 0 299 245 10 71 chr2 21601641 21601739 -229086115 - MIR SINE MIR -75 133 42 462 167 24 12 chr2 21603533 21603617 -229084237 + MLT1A1 LTR MaLR 1 85 -280 1226 139 135 87 chr2 21603718 21604006 -229083848 - AluJb SINE Alu 0 302 1 33 56 0 0 chr2 21604197 21604251 -229083603 + AT_rich Low_complexity Low_complexity 1 54 0 1264 186 52 0 chr2 21604731 21605036 -229082818 - MER33 DNA MER1_type -13 311 1 462 262 139 58 chr2 21605037 21605147 -229082707 + MER5A DNA MER1_type 4 135 -54 1915 124 0 32 chr2 21605147 21605450 -229082404 - AluSc SINE Alu 0 298 5 462 262 139 58 chr2 21605450 21605510 -229082344 + MER5A DNA MER1_type 135 189 0 2261 111 3 0 chr2 21606896 21607194 -229080660 + AluSg SINE Alu 1 299 -11 1218 209 45 73 chr2 21608000 21608397 -229079457 - MLT1B LTR MaLR 0 390 8 397 144 58 29 chr2 21610790 21610894 -229076960 - MER53 DNA DNA -70 119 13 566 259 103 19 chr2 21611381 21611806 -229076048 - L1M4 LINE L1 -3572 2574 2114 591 318 79 65 chr2 21612442 21613011 -229074843 - HAL1 LINE L1 -1111 1396 820 1761 281 27 38 chr2 21613137 21613686 -229074168 + MLT1E LTR MaLR 51 593 0 2861 145 23 0 chr2 21615133 21615616 -229072238 - L1PB1 LINE L1 -1 6866 6373 304 45 0 0 chr2 21615626 21615670 -229072184 - L1PA6 LINE L1 -2 6152 6109 9854 183 46 31 chr2 21615671 21620195 -229067659 - L1PB1 LINE L1 -1209 5653 903 681 289 24 0 chr2 21620280 21620488 -229067366 + MIR SINE MIR 46 258 -4 33 0 0 0 chr2 21620734 21620767 -229067087 + AT_rich Low_complexity Low_complexity 1 33 0 1685 114 36 112 chr2 21622605 21623000 -229064854 + L1MA2 LINE L1 5932 6304 0 395 316 40 0 chr2 21626541 21626693 -229061161 + L1MEc LINE L1 20 177 -6219 * 816 269 100 24 chr2 21626690 21627278 -229060576 + L1MEc LINE L1 1005 1637 -4759 3660 63 0 11 chr2 21627427 21627904 -229059950 - L1PA7 LINE L1 -4 6150 5679 1659 153 66 38 chr2 21628196 21628561 -229059293 + THE1C LTR MaLR 1 375 0 9628 137 12 39 chr2 21628563 21630186 -229057668 + THE1C-int LTR MaLR 3 1580 0 1921 120 67 25 chr2 21630187 21630546 -229057308 + THE1C LTR MaLR 2 375 0 356 283 90 21 chr2 21631906 21632051 -229055803 + MIR SINE MIR 90 244 -18 200 242 91 15 chr2 21633090 21633156 -229054698 + L2 LINE L2 3232 3302 -11 1972 124 10 25 chr2 21633785 21634099 -229053755 - AluSx SINE Alu -3 309 1 209 286 175 3 chr2 21634258 21634352 -229053502 - L2 LINE L2 -16 3297 3141 5971 103 13 6 chr2 21634877 21635928 -229051926 + L1PA14 LINE L1 5098 6157 -4 2139 86 0 4 chr2 21635973 21636240 -229051614 + AluSq SINE Alu 23 288 -25 634 300 31 24 chr2 21636328 21636615 -229051239 - L1ME LINE L1 -357 5813 5525 271 373 14 5 chr2 21636662 21636879 -229050975 - L1MEc LINE L1 -4768 1628 1410 360 318 27 20 chr2 21637032 21637180 -229050674 - L1MEc LINE L1 -5269 936 788 308 325 53 105 chr2 21637361 21638030 -229049824 - L2 LINE L2 -542 2772 2199 2651 77 0 0 chr2 21638030 21638379 -229049475 - L1PA8 LINE L1 0 6172 5824 308 325 53 105 chr2 21638379 21638984 -229048870 - L2 LINE L2 -1115 2199 1564 2189 111 3 0 chr2 21639075 21639372 -229048482 + AluSg SINE Alu 2 299 -11 372 259 36 54 chr2 21639468 21639634 -229048220 - MIR SINE MIR -3 259 97 239 326 47 0 chr2 21639662 21639748 -229048106 - MIR SINE MIR -155 107 18 181 328 15 0 chr2 21639749 21639816 -229048038 - MIR SINE MIR -54 208 141 268 313 43 18 chr2 21640451 21640614 -229047240 - L1ME LINE L1 -364 5757 5591 23 0 0 0 chr2 21640628 21640651 -229047203 + AT_rich Low_complexity Low_complexity 1 23 0 226 277 44 101 chr2 21643277 21643436 -229044418 - L3 LINE CR1 -48 1529 1380 363 320 26 26 chr2 21643484 21643640 -229044214 + MIR3 SINE MIR 25 180 -28 27 0 0 0 chr2 21643690 21643717 -229044137 + AT_rich Low_complexity Low_complexity 1 27 0 235 306 108 18 chr2 21644849 21644960 -229042894 + MIR SINE MIR 28 148 -114 1539 151 19 28 chr2 21645010 21645328 -229042526 - L1M2 LINE L1 -682 5618 5304 455 243 73 0 chr2 21645320 21645456 -229042398 - L1MA4 LINE L1 0 6300 6155 * 3571 173 16 20 chr2 21645434 21646220 -229041634 - L1 LINE L1 -778 5368 4586 2826 166 100 19 chr2 21646218 21646850 -229041004 + L1MA6 LINE L1 5605 6287 -13 * 738 339 91 16 chr2 21646978 21647364 -229040490 - LTR16B LTR ERVL -49 415 1 1345 313 131 57 chr2 21647450 21648444 -229039410 - L2 LINE L2 -353 2961 1895 806 160 15 0 chr2 21649152 21649283 -229038571 + FLAM_C SINE Alu 1 133 0 1004 289 74 16 chr2 21649578 21649941 -229037913 + L3 LINE CR1 1178 1561 -16 2174 148 28 3 chr2 21650156 21650520 -229037334 - Tigger4(Zombi) DNA MER2_type 0 2731 2359 482 176 24 0 chr2 21650542 21650627 -229037227 - Tigger4(Zombi) DNA MER2_type -2644 87 1 3076 206 30 89 chr2 21651118 21652424 -229035430 - L1M2 LINE L1 -597 5694 4482 2327 215 25 23 chr2 21652413 21653012 -229034842 - L1M2 LINE L1 -2227 3919 3320 * 1560 249 11 19 chr2 21653011 21653389 -229034465 + L1M3e LINE L1 1734 2108 -4922 * 8050 200 49 17 chr2 21653416 21656822 -229031032 + L1MA4A LINE L1 2 6999 -6 1150 261 45 70 chr2 21656850 21657521 -229030333 + L1M4c LINE L1 990 1643 -4741 241 344 142 16 chr2 21657885 21658132 -229029722 - L2 LINE L2 -44 3228 2951 666 236 133 10 chr2 21658839 21659042 -229028812 + MIR SINE MIR 15 242 -20 757 284 21 19 chr2 21660797 21660891 -229026963 - L2 LINE L2 -186 3127 3035 2177 107 7 0 chr2 21660891 21661180 -229026674 + AluSg SINE Alu 1 291 -19 757 284 21 19 chr2 21661180 21661433 -229026421 - L2 LINE L2 -278 3035 2780 354 280 128 44 chr2 21661461 21661711 -229026143 + L2 LINE L2 2819 3089 -224 318 255 10 20 chr2 21661718 21661820 -229026034 - LTR33A LTR ERVL -10 513 413 230 191 0 32 chr2 21662362 21662425 -229025429 + (CCA)n Simple_repeat Simple_repeat 3 63 0 279 114 0 0 chr2 21662929 21662973 -229024881 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 682 329 82 30 chr2 21662975 21663404 -229024450 - L2 LINE L2 -15 3257 2807 234 298 53 26 chr2 21663450 21663564 -229024290 - L2 LINE L2 -897 2417 2301 1217 114 6 6 chr2 21663823 21663998 -229023856 + AluSx SINE Alu 1 175 -137 2473 67 0 0 chr2 21664158 21664455 -229023399 + AluY SINE Alu 1 297 -14 1074 231 154 23 chr2 21664473 21664902 -229022952 + MLT1H LTR MaLR 35 555 0 371 303 9 9 chr2 21664924 21665033 -229022821 - HERVL LTR ERVL -1195 4459 4351 22 0 0 0 chr2 21665795 21665817 -229022037 + AT_rich Low_complexity Low_complexity 1 22 0 1569 192 47 27 chr2 21665909 21666274 -229021580 + THE1C LTR MaLR 4 375 0 260 338 47 20 chr2 21666529 21666677 -229021177 - MLT1J2 LTR MaLR -40 410 259 412 238 35 14 chr2 21666778 21666921 -229020933 - MER5C DNA MER1_type -96 228 83 3802 166 27 3 chr2 21666922 21667597 -229020257 - L1PA15 LINE L1 -7 6158 5468 373 291 148 13 chr2 21668606 21668836 -229019018 - L1MC/D LINE L1 -788 5571 5311 228 313 65 34 chr2 21669236 21669498 -229018356 - L1MC/D LINE L1 -1315 4831 4562 358 302 165 32 chr2 21669801 21670202 -229017652 - L1MC/D LINE L1 -2884 3262 2809 578 274 108 26 chr2 21670300 21670903 -229016951 - L1MC/D LINE L1 -3381 2765 2114 450 312 86 41 chr2 21671539 21671808 -229016046 - HAL1 LINE L1 -1111 1396 1116 14503 227 34 14 chr2 21672248 21673871 -229013983 - L1P4 LINE L1 -680 6923 5334 4634 59 7 2 chr2 21673871 21674464 -229013390 - L1PA7 LINE L1 0 6154 5559 14503 227 34 14 chr2 21674464 21675201 -229012653 - L1P4 LINE L1 -2269 5334 4613 1686 186 0 0 chr2 21675201 21675476 -229012378 - AluSx SINE Alu -11 301 27 14503 227 34 14 chr2 21675476 21678056 -229009798 - L1P4 LINE L1 -2990 4613 1884 318 284 57 0 chr2 21678057 21678145 -229009709 - MER5C DNA MER1_type -229 95 3 260 309 59 53 chr2 21678145 21678224 -229009630 - MLT1J2 LTR MaLR -297 153 71 2141 194 24 5 chr2 21678224 21678646 -229009208 - MSTB1 LTR MaLR 0 432 3 260 309 59 53 chr2 21678646 21678718 -229009136 - MLT1J2 LTR MaLR -379 71 1 206 340 41 48 chr2 21679264 21679411 -229008443 - L2 LINE L2 -844 2470 2325 1536 261 167 91 chr2 21680688 21681240 -229006614 + MLT1E2 LTR MaLR 5 598 -56 395 299 92 57 chr2 21681818 21682132 -229005722 - HAL1 LINE L1 -1291 1216 892 315 0 0 0 chr2 21682616 21682651 -229005203 + (TA)n Simple_repeat Simple_repeat 2 36 0 1927 106 4 29 chr2 21682667 21682942 -229004912 - AluSx SINE Alu -30 282 15 380 305 126 0 chr2 21683307 21683474 -229004380 - HAL1 LINE L1 -2318 189 2 219 139 0 0 chr2 21683959 21683995 -229003859 + (ATG)n Simple_repeat Simple_repeat 3 38 0 188 280 53 53 chr2 21684713 21684788 -229003066 + L3 LINE CR1 1370 1444 -133 376 213 68 108 chr2 21684936 21685141 -229002713 - MIR3 SINE MIR -28 180 31 271 346 51 56 chr2 21685376 21685610 -229002244 + L2 LINE L2 3030 3262 -10 906 280 115 7 chr2 21686486 21686765 -229001089 + MLT1I LTR MaLR 101 409 0 780 288 21 21 chr2 21688059 21688299 -228999555 - MIR SINE MIR 0 262 23 264 294 181 23 chr2 21688609 21688830 -228999024 + MIR SINE MIR 7 262 0 195 186 0 0 chr2 21690789 21690832 -228997022 + CT-rich Low_complexity Low_complexity 2 44 0 5197 130 66 2 chr2 21692236 21692577 -228995277 - L1PA13 LINE L1 -1 6162 5844 207 0 0 0 chr2 21692577 21692600 -228995254 + (TTA)n Simple_repeat Simple_repeat 2 24 0 5197 130 66 2 chr2 21692600 21693311 -228994543 - L1PA13 LINE L1 -319 5844 5047 368 177 13 25 chr2 21693312 21693391 -228994463 + AluJb SINE Alu 29 106 -196 207 338 54 0 chr2 21693453 21693527 -228994327 - MIR SINE MIR -131 131 54 234 352 96 0 chr2 21693684 21693809 -228994045 - MIR SINE MIR -124 138 2 513 306 73 16 chr2 21693829 21694074 -228993780 - MIR SINE MIR -3 259 1 215 280 0 20 chr2 21694193 21694243 -228993611 - L2 LINE L2 -226 3046 2998 857 219 5 19 chr2 21695066 21695276 -228992578 - L1MB8 LINE L1 0 6178 5972 930 216 30 15 chr2 21695618 21695817 -228992037 - MER82 DNA MER2_type 0 653 452 267 352 48 14 chr2 21695857 21696002 -228991852 + MIR SINE MIR 2 151 -111 49 32 0 0 chr2 21696045 21696108 -228991746 + AT_rich Low_complexity Low_complexity 1 63 0 284 284 0 23 chr2 21696111 21696199 -228991655 - MER82 DNA MER2_type -567 86 1 238 238 16 16 chr2 21696538 21696601 -228991253 - MLT1J LTR MaLR -146 365 303 26 0 0 0 chr2 21697486 21697512 -228990342 + AT_rich Low_complexity Low_complexity 1 26 0 29 28 0 0 chr2 21697589 21697625 -228990229 + AT_rich Low_complexity Low_complexity 1 36 0 389 337 47 11 chr2 21698011 21698201 -228989653 + MIR SINE MIR 7 203 -59 340 294 33 0 chr2 21698293 21698385 -228989469 + polypurine Low_complexity Low_complexity 6 100 0 873 203 50 68 chr2 21698934 21699156 -228988698 + MER20 DNA MER1_type 2 219 0 27 62 0 0 chr2 21699839 21699887 -228987967 + AT_rich Low_complexity Low_complexity 1 48 0 241 300 0 0 chr2 21700825 21700895 -228986959 + L1ME LINE L1 2959 3028 -3118 310 336 139 40 chr2 21701141 21701617 -228986237 + L1ME LINE L1 3291 3813 -2333 282 282 29 10 chr2 21702136 21702239 -228985615 + L1ME LINE L1 4506 4610 -1536 42508 36 23 1 chr2 21702815 21708853 -228979001 - L1PA3 LINE L1 0 6155 1 289 297 7 36 chr2 21709454 21709592 -228978262 + L1ME LINE L1 5612 5745 -376 286 242 125 92 chr2 21710431 21710551 -228977303 - L2 LINE L2 -1 3312 3189 248 224 0 0 chr2 21710797 21710846 -228977008 + MER3 DNA MER1_type 42 90 -119 * 258 204 32 54 chr2 21710825 21710918 -228976936 - MER3 DNA MER1_type -118 91 1 1985 139 0 0 chr2 21710947 21711228 -228976626 - AluSx SINE Alu -29 283 3 638 318 218 3 chr2 21712619 21712940 -228974914 - L2 LINE L2 0 3313 2924 333 283 25 33 chr2 21712936 21713056 -228974798 - L2 LINE L2 -580 2734 2616 * 248 169 51 0 chr2 21713692 21713751 -228974103 - L1MCa LINE L1 -4359 2067 2006 245 182 18 0 chr2 21713751 21713806 -228974048 + (TA)n Simple_repeat Simple_repeat 1 56 0 33 0 0 0 chr2 21714356 21714389 -228973465 + AT_rich Low_complexity Low_complexity 1 33 0 185 286 48 32 chr2 21714993 21715056 -228972798 - L2 LINE L2 -18 3295 3232 1942 130 3 3 chr2 21716011 21716322 -228971532 + AluSx SINE Alu 1 311 0 2659 244 99 40 chr2 21717010 21718066 -228969788 + L1MC4 LINE L1 6884 8002 -40 363 238 38 12 chr2 21718073 21718233 -228969621 + (TA)n Simple_repeat Simple_repeat 2 165 0 527 211 18 0 chr2 21718323 21718437 -228969417 - L1MD2 LINE L1 -4 6355 6240 230 81 0 0 chr2 21718437 21718474 -228969380 + L1MC4 LINE L1 8006 8042 0 304 318 63 8 chr2 21718721 21718847 -228969007 + MIR SINE MIR 121 253 -9 21 0 0 0 chr2 21719410 21719431 -228968423 + AT_rich Low_complexity Low_complexity 1 21 0 679 142 97 0 chr2 21719761 21719895 -228967959 + L1MA4 LINE L1 6147 6293 -7 249 286 224 56 chr2 21720197 21720358 -228967496 + MIR SINE MIR 3 190 -72 1637 186 3 7 chr2 21722589 21722885 -228964969 + 7SLRNA srpRNA srpRNA 1 295 -25 3496 238 42 8 chr2 21723351 21724242 -228963612 - L1MB5 LINE L1 0 6672 5752 2013 234 76 33 chr2 21724261 21725049 -228962805 - L1MB5 LINE L1 -4741 1905 1043 444 123 12 12 chr2 21725049 21725130 -228962724 - L1PA10 LINE L1 -10 6158 6078 2013 234 76 33 chr2 21725130 21725365 -228962489 - L1MB5 LINE L1 -5603 1043 820 270 350 87 0 chr2 21727178 21727281 -228960573 - L2 LINE L2 -18 3254 3143 295 314 13 70 chr2 21727378 21727437 -228960417 - MER5A DNA MER1_type -26 163 102 1788 133 98 14 chr2 21727437 21727783 -228960071 + THE1C LTR MaLR 1 375 0 295 314 13 70 chr2 21727783 21727879 -228959975 - MER5A DNA MER1_type -87 102 17 1596 180 70 44 chr2 21728794 21729177 -228958677 - MER21B LTR ERV1 -11 852 460 850 224 90 0 chr2 21729173 21729374 -228958480 + MLT1E2 LTR MaLR 406 624 -2 * 193 238 0 0 chr2 21730899 21730941 -228956913 - MIR SINE MIR -116 146 105 2619 82 0 3 chr2 21731176 21731541 -228956313 - L1P LINE L1 -3961 2185 1822 1968 62 23 0 chr2 21731541 21731797 -228956057 + L1PA6 LINE L1 5893 6154 0 313 353 26 7 chr2 21732273 21732426 -228955428 + MIR SINE MIR 94 249 -13 366 273 106 45 chr2 21733561 21733752 -228954102 - MIR SINE MIR 0 262 55 213 268 24 126 chr2 21734121 21734248 -228953606 + L2 LINE L2 3141 3254 -18 25 51 0 0 chr2 21734704 21734743 -228953111 + AT_rich Low_complexity Low_complexity 1 39 0 212 255 0 0 chr2 21735816 21735863 -228951991 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 51 0 0 chr2 21736486 21736525 -228951329 + AT_rich Low_complexity Low_complexity 1 39 0 231 204 20 0 chr2 21737165 21737214 -228950640 + (CA)n Simple_repeat Simple_repeat 2 51 0 180 0 0 0 chr2 21737308 21737328 -228950526 + (TTA)n Simple_repeat Simple_repeat 3 22 0 1387 62 6 0 chr2 21737328 21737506 -228950348 - L1PA7 LINE L1 -18 6136 5958 335 360 64 12 chr2 21738072 21738244 -228949610 - MIR SINE MIR -46 216 36 265 367 33 0 chr2 21738283 21738403 -228949451 + MIR3 SINE MIR 40 163 -45 255 255 83 83 chr2 21740253 21740445 -228947409 + L2 LINE L2 1808 1999 -1315 22 0 0 0 chr2 21740476 21740498 -228947356 + AT_rich Low_complexity Low_complexity 1 22 0 2239 127 8 23 chr2 21740685 21741056 -228946798 + THE1B LTR MaLR 1 428 0 518 336 61 9 chr2 21742072 21742286 -228945568 - MIR SINE MIR -18 244 20 631 280 24 6 chr2 21742757 21742925 -228944929 + MER5B DNA MER1_type 1 171 -7 2059 146 10 0 chr2 21743125 21743427 -228944427 + AluSx SINE Alu 1 305 -7 400 298 55 29 chr2 21743675 21743880 -228943974 - MIR SINE MIR -24 238 30 1855 115 22 15 chr2 21745904 21746173 -228941681 + AluSp SINE Alu 26 296 -17 502 325 48 17 chr2 21746924 21747155 -228940699 + MIR SINE MIR 23 260 -2 562 205 30 95 chr2 21748125 21748325 -228939529 + MER5A DNA MER1_type 1 187 -2 2233 107 0 7 chr2 21749655 21749965 -228937889 - AluSc SINE Alu -1 308 1 912 191 8 89 chr2 21750051 21750308 -228937546 - L1MA9 LINE L1 -38 6274 6039 1444 116 5 0 chr2 21750309 21750533 -228937321 - HSMAR2 DNA Mariner -1 1301 1077 300 365 56 0 chr2 21750680 21750787 -228937067 + L2 LINE L2 3115 3227 -45 480 333 57 37 chr2 21750952 21751198 -228936656 - MIR SINE MIR -10 252 2 241 184 20 0 chr2 21751233 21751282 -228936572 + GA-rich Low_complexity Low_complexity 4 53 0 1439 293 160 25 chr2 21751416 21752249 -228935605 + L2 LINE L2 2243 3189 -124 745 317 90 15 chr2 21752298 21752566 -228935288 + MER45C DNA AcHobo 1 288 -665 1262 201 0 62 chr2 21752569 21752857 -228934997 - AluJo SINE Alu -14 298 29 300 196 0 0 chr2 21753153 21753204 -228934650 + MER45B DNA AcHobo 989 1039 -1 202 232 36 18 chr2 21753248 21753304 -228934550 + L2 LINE L2 3254 3310 -3 364 274 63 29 chr2 21755813 21755988 -228931866 + L1ME LINE L1 5520 5700 -421 309 279 41 41 chr2 21756081 21756203 -228931651 + L1ME LINE L1 5544 5665 -2143 566 205 139 36 chr2 21756248 21756414 -228931440 - MER58A DNA MER1_type -1 223 41 22 0 0 0 chr2 21756545 21756567 -228931287 + AT_rich Low_complexity Low_complexity 1 22 0 601 285 186 44 chr2 21756828 21757288 -228930566 - MLT1H1 LTR MaLR -72 495 1 22 0 0 0 chr2 21757325 21757347 -228930507 + AT_rich Low_complexity Low_complexity 1 22 0 425 284 54 64 chr2 21758702 21758998 -228928856 + MLT1L LTR MaLR 6 298 -317 272 252 0 10 chr2 21759029 21759132 -228928722 + (TA)n Simple_repeat Simple_repeat 1 102 0 261 222 0 0 chr2 21759166 21759229 -228928625 + (TG)n Simple_repeat Simple_repeat 2 64 0 706 250 28 0 chr2 21759230 21759374 -228928480 - FRAM SINE Alu -25 151 4 530 268 70 0 chr2 21759385 21759527 -228928327 + MLT1L LTR MaLR 341 492 -123 302 359 56 0 chr2 21759629 21759796 -228928058 + MIR SINE MIR 32 206 -56 853 160 15 73 chr2 21760020 21760226 -228927628 + L1MA9 LINE L1 6119 6312 0 1205 109 11 5 chr2 21760652 21760836 -228927018 - L1PB2 LINE L1 0 6151 5967 260 281 52 30 chr2 21761740 21761875 -228925979 + L1ME2 LINE L1 6016 6153 -11 312 314 69 25 chr2 21761999 21762158 -228925696 + L1ME LINE L1 5676 5841 -280 3314 153 20 15 chr2 21762199 21762793 -228925061 + L1MC1 LINE L1 5601 6197 -136 22 56 0 0 chr2 21762852 21762888 -228924966 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr2 21763333 21763361 -228924493 + AT_rich Low_complexity Low_complexity 1 28 0 532 267 108 46 chr2 21763595 21764048 -228923806 + L1ME4a LINE L1 5355 5835 -286 613 316 80 4 chr2 21764097 21764334 -228923520 + MIR SINE MIR 7 261 -1 276 291 47 12 chr2 21765896 21765982 -228921872 - L2 LINE L2 -20 3293 3205 1898 131 31 69 chr2 21766189 21766539 -228921315 - MER1B DNA MER1_type 0 337 1 201 121 0 0 chr2 21766956 21766989 -228920865 + (CAATT)n Simple_repeat Simple_repeat 3 35 0 286 252 35 112 chr2 21767739 21767882 -228919972 + MIR SINE MIR 20 151 -111 393 188 0 0 chr2 21768809 21768889 -228918965 + (CA)n Simple_repeat Simple_repeat 2 81 0 181 148 93 0 chr2 21769962 21770016 -228917838 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 343 288 63 44 chr2 21770255 21770460 -228917394 + LTR33A LTR ERVL 312 520 -3 21 36 0 0 chr2 21771134 21771162 -228916692 + AT_rich Low_complexity Low_complexity 1 28 0 1781 133 0 4 chr2 21773080 21773335 -228914519 - AluSx SINE Alu -2 310 57 859 138 0 0 chr2 21773337 21773460 -228914394 - AluSq/x SINE Alu -189 123 1 201 359 41 14 chr2 21776474 21776619 -228911235 - MIR SINE MIR -46 216 68 22 0 0 0 chr2 21776845 21776867 -228910987 + AT_rich Low_complexity Low_complexity 1 22 0 1088 162 17 6 chr2 21778015 21778194 -228909660 + MER5A DNA MER1_type 2 182 -7 387 327 39 6 chr2 21778405 21778561 -228909293 + MIR SINE MIR 47 207 -55 185 422 0 20 chr2 21779935 21780037 -228907817 - MIR SINE MIR -85 123 24 24 53 0 0 chr2 21780258 21780296 -228907558 + AT_rich Low_complexity Low_complexity 1 38 0 1944 93 0 12 chr2 21780396 21780653 -228907201 + AluSg SINE Alu 46 299 -11 2223 123 23 11 chr2 21781270 21781621 -228906233 - THE1A LTR MaLR 0 355 1 11072 118 4 3 chr2 21781621 21783199 -228904655 - THE1A-int LTR MaLR 0 1580 1 2266 113 14 11 chr2 21783199 21783553 -228904301 - THE1A LTR MaLR 0 355 1 443 259 7 43 chr2 21783637 21783776 -228904078 - MIR SINE MIR -37 225 92 226 345 36 50 chr2 21785314 21785453 -228902401 + L2 LINE L2 3177 3313 0 2433 71 0 0 chr2 21785544 21785852 -228902002 - AluY SINE Alu -3 308 1 877 201 13 0 chr2 21786187 21786341 -228901513 - FRAM SINE Alu -18 158 3 29 106 0 0 chr2 21786369 21786482 -228901372 + AT_rich Low_complexity Low_complexity 1 113 0 1810 140 0 76 chr2 21787398 21787553 -228900301 + AluSx SINE Alu 1 119 -193 489 62 0 0 chr2 21787553 21787618 -228900236 + (CA)n Simple_repeat Simple_repeat 2 66 0 1810 140 0 76 chr2 21787618 21787791 -228900063 + AluSx SINE Alu 119 304 -8 315 335 79 70 chr2 21789043 21789676 -228898178 + HAL1 LINE L1 907 1545 -962 23 0 0 0 chr2 21789880 21789903 -228897951 + AT_rich Low_complexity Low_complexity 1 23 0 245 274 0 40 chr2 21789966 21790090 -228897764 + GA-rich Low_complexity Low_complexity 2 120 0 213 39 0 0 chr2 21790254 21790280 -228897574 + (CA)n Simple_repeat Simple_repeat 1 26 0 235 287 14 35 chr2 21790323 21790466 -228897388 + GA-rich Low_complexity Low_complexity 3 142 0 1605 229 70 11 chr2 21790507 21791039 -228896815 + L1M3c LINE L1 1048 1610 -4531 1779 178 42 28 chr2 21791051 21791523 -228896331 + MLT2A2 LTR ERVL 6 486 -68 767 159 153 0 chr2 21791545 21791708 -228896146 + L1M3 LINE L1 5613 5800 -534 * 11362 228 23 9 chr2 21791707 21795666 -228892188 - L1PA16 LINE L1 -4 6162 2150 364 291 66 20 chr2 21797475 21797626 -228890228 - MIR SINE MIR -24 238 81 15464 28 6 1 chr2 21797753 21800380 -228887474 + L1PA3 LINE L1 3533 6167 0 306 50 0 0 chr2 21801043 21801083 -228886771 + (TG)n Simple_repeat Simple_repeat 2 41 0 260 307 23 11 chr2 21801518 21801606 -228886248 + L2 LINE L2 2502 2590 -724 1248 138 47 63 chr2 21801606 21801860 -228885994 - MER1B DNA MER1_type 0 339 130 278 234 26 26 chr2 21801889 21801966 -228885888 + L2 LINE L2 2577 2653 -661 2260 66 10 13 chr2 21802256 21802561 -228885293 - L1PA8 LINE L1 0 6172 5869 5419 171 25 14 chr2 21802598 21803109 -228884745 - L1MA8 LINE L1 -3 6288 5784 2485 59 3 10 chr2 21803109 21803415 -228884439 - AluY SINE Alu -6 305 2 5419 171 25 14 chr2 21803415 21804760 -228883094 - L1MA8 LINE L1 -507 5784 4411 211 189 0 0 chr2 21804794 21804831 -228883023 + (CCCTAA)n Simple_repeat Simple_repeat 1 37 0 1932 178 28 3 chr2 21804877 21805232 -228882622 - THE1B LTR MaLR 0 364 1 399 194 0 0 chr2 21805256 21805328 -228882526 + L1PB1 LINE L1 129 200 -6663 1455 148 12 27 chr2 21805330 21805587 -228882267 + L1PB1 LINE L1 636 888 -5975 * 8748 200 59 39 chr2 21805584 21805871 -228881983 + L1PB1 LINE L1 3217 3497 -3365 249 211 0 39 chr2 21805871 21805923 -228881931 + LTR27 LTR ERV1 587 636 0 8748 200 59 39 chr2 21805923 21807926 -228879928 + L1PB1 LINE L1 3497 5604 -1258 1914 179 39 26 chr2 21807926 21808480 -228879374 + MLT2A2 LTR ERVL 1 554 0 4869 196 13 20 chr2 21808481 21809708 -228878146 + L1PB1 LINE L1 5601 6820 -47 939 216 51 47 chr2 21809731 21809883 -228877971 + MER2 DNA MER2_type 88 243 -102 2246 98 0 29 chr2 21809883 21810190 -228877664 + AluY SINE Alu 1 298 -13 939 216 51 47 chr2 21810190 21810291 -228877563 + MER2 DNA MER2_type 243 342 -3 794 157 5 38 chr2 21810292 21810477 -228877377 - L1MA8 LINE L1 -1732 4414 4236 2912 192 4 0 chr2 21810479 21811027 -228876827 - L1MA8 LINE L1 -1967 4179 3630 227 277 15 31 chr2 21811191 21811256 -228876598 - MLT1I LTR MaLR -280 129 66 1836 132 33 10 chr2 21811264 21811567 -228876287 - AluSg SINE Alu 0 310 1 399 300 61 8 chr2 21812240 21812419 -228875435 - MIR SINE MIR -10 252 29 207 151 57 19 chr2 21812745 21812798 -228875056 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 886 284 94 79 chr2 21813411 21814007 -228873847 - MER77 LTR ERV1 0 605 1 233 256 116 14 chr2 21814252 21814350 -228873504 - MLT1I LTR MaLR -260 149 42 448 299 120 14 chr2 21814785 21815002 -228872852 - MIR SINE MIR -11 251 12 2393 103 16 47 chr2 21815420 21815459 -228872395 - THE1C LTR MaLR 0 375 336 2213 132 0 0 chr2 21815459 21815769 -228872085 + AluSx SINE Alu 1 310 -2 2393 103 16 47 chr2 21815769 21816116 -228871738 - THE1C LTR MaLR -39 336 1 24789 56 39 3 chr2 21816398 21819832 -228868022 - L1P LINE L1 -2589 3557 1 200 225 14 14 chr2 21820302 21820373 -228867481 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 310 215 112 116 chr2 21820388 21820452 -228867402 - L1ME4a LINE L1 -201 5920 5857 276 30 0 0 chr2 21820452 21820485 -228867369 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 215 112 116 chr2 21820485 21820575 -228867279 - L1ME4a LINE L1 -264 5857 5765 1846 124 7 25 chr2 21820575 21820850 -228867004 - AluSp SINE Alu -5 308 39 310 215 112 116 chr2 21820850 21820927 -228866927 - L1ME4a LINE L1 -356 5765 5689 194 375 23 16 chr2 21821494 21821507 -228866347 + L2 LINE L2 2851 2862 -410 387 0 0 0 chr2 21821507 21821550 -228866304 + (TG)n Simple_repeat Simple_repeat 2 44 0 194 375 23 16 chr2 21821550 21821664 -228866190 + L2 LINE L2 2862 2979 -293 210 71 0 0 chr2 21821744 21821772 -228866082 + (TG)n Simple_repeat Simple_repeat 1 28 0 1546 199 59 0 chr2 21822731 21823052 -228864802 + Tigger7 DNA MER2_type 1 340 -393 778 150 8 0 chr2 21823065 21823198 -228864656 + Tigger7 DNA MER2_type 2454 2587 0 1003 329 50 2 chr2 21823436 21823856 -228863998 + L1M2 LINE L1 11 450 -6399 10744 225 59 18 chr2 21824721 21825288 -228862566 + L1P5 LINE L1 1071 1613 -5245 2178 118 0 0 chr2 21825288 21825585 -228862269 + AluY SINE Alu 1 297 -14 10744 225 59 18 chr2 21825585 21830174 -228857680 + L1P5 LINE L1 1613 6418 -440 214 255 104 28 chr2 21830429 21830535 -228857319 - L2 LINE L2 0 3313 3200 241 296 119 63 chr2 21833184 21833343 -228854511 - MIR SINE MIR -60 202 35 3290 147 11 11 chr2 21834622 21835146 -228852708 + MER1A DNA MER1_type 4 527 0 362 284 65 60 chr2 21835408 21835609 -228852245 - LTR33 LTR ERVL -319 202 1 858 321 148 32 chr2 21835678 21836358 -228851496 + L2 LINE L2 2122 2722 -591 2128 118 65 8 chr2 21836358 21836713 -228851141 - THE1C LTR MaLR 0 375 1 7197 182 34 34 chr2 21836713 21838293 -228849561 - THE1C-int LTR MaLR 0 1580 1 2212 126 41 16 chr2 21838293 21838659 -228849195 - THE1C LTR MaLR 0 375 1 858 321 148 32 chr2 21838659 21839022 -228848832 + L2 LINE L2 2721 3312 -1 21 71 0 0 chr2 21839283 21839325 -228848529 + AT_rich Low_complexity Low_complexity 1 42 0 180 250 0 0 chr2 21839900 21839940 -228847914 + L2 LINE L2 3274 3313 0 370 312 41 7 chr2 21840228 21840379 -228847475 + MIR SINE MIR 52 206 -56 323 295 8 78 chr2 21841299 21841428 -228846426 - L2 LINE L2 -219 3053 2934 2150 130 3 0 chr2 21841647 21841948 -228845906 + AluSp SINE Alu 1 302 -11 427 328 206 23 chr2 21842115 21842755 -228845099 - L2 LINE L2 -809 2505 1749 2346 115 0 0 chr2 21843770 21844082 -228843772 + AluSx SINE Alu 1 312 0 278 304 20 20 chr2 21844254 21844356 -228843498 - MLT1I LTR MaLR -189 220 119 361 287 154 47 chr2 21844735 21845014 -228842840 + L2 LINE L2 3005 3313 0 268 82 20 20 chr2 21845503 21845552 -228842302 + (TC)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr2 21845775 21845803 -228842051 + AT_rich Low_complexity Low_complexity 1 28 0 2157 104 7 13 chr2 21846796 21847095 -228840759 + AluY SINE Alu 1 297 -14 348 24 0 0 chr2 21847098 21847139 -228840715 + (GA)n Simple_repeat Simple_repeat 2 42 0 285 29 0 0 chr2 21848643 21848677 -228839177 + (A)n Simple_repeat Simple_repeat 1 34 0 331 347 71 31 chr2 21849704 21849900 -228837954 + MIR SINE MIR 33 236 -26 292 93 19 19 chr2 21850557 21850611 -228837243 + (TTCC)n Simple_repeat Simple_repeat 4 57 0 325 111 16 32 chr2 21851032 21851095 -228836759 - MLT2B1 LTR ERVL 0 520 459 270 261 15 0 chr2 21851121 21851186 -228836668 + (CATA)n Simple_repeat Simple_repeat 3 68 0 6387 144 11 0 chr2 21851186 21852233 -228835621 - HSMAR2 DNA Mariner -2 1300 242 620 206 29 29 chr2 21852241 21852411 -228835443 - MLT2B1 LTR ERVL -350 170 1 237 365 61 0 chr2 21853765 21853880 -228833974 + L2 LINE L2 3183 3304 -9 2030 143 0 31 chr2 21854008 21854330 -228833524 + AluSx SINE Alu 1 312 0 1166 200 0 4 chr2 21855008 21855238 -228832616 + MSTB LTR MaLR 1 229 -197 299 164 0 30 chr2 21855238 21855305 -228832549 + CT-rich Low_complexity Low_complexity 2 66 0 1027 178 50 0 chr2 21855305 21855524 -228832330 + MSTB LTR MaLR 203 432 0 230 349 72 68 chr2 21855554 21855789 -228832065 - L2 LINE L2 -1898 1416 1181 220 360 73 0 chr2 21856414 21856564 -228831290 + L2 LINE L2 3146 3306 -7 729 204 91 42 chr2 21857077 21857341 -228830513 + L1ME3A LINE L1 5881 6157 -13 407 292 64 26 chr2 21857359 21857634 -228830220 + L1ME LINE L1 5211 5493 -671 359 277 262 0 chr2 21857634 21857840 -228830014 - MIR SINE MIR -1 261 2 340 247 72 54 chr2 21858469 21858635 -228829219 + L1MEc LINE L1 2192 2360 -4036 188 338 120 15 chr2 21859172 21859305 -228828549 - L2 LINE L2 -909 2405 2259 385 299 26 62 chr2 21859389 21859533 -228828321 - HAL1b LINE L1 -602 746 598 197 33 33 0 chr2 21859533 21859563 -228828291 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 385 299 26 62 chr2 21859563 21859761 -228828093 - HAL1b LINE L1 -750 598 421 1769 39 0 5 chr2 21859761 21859968 -228827886 + AluY SINE Alu 100 305 -6 385 299 26 62 chr2 21859968 21860076 -228827778 - HAL1b LINE L1 -927 421 311 358 208 10 40 chr2 21860140 21860241 -228827613 - MLT1J LTR MaLR -13 498 401 * 481 306 33 27 chr2 21860236 21860419 -228827435 - MLT1J LTR MaLR -233 278 95 22 56 0 0 chr2 21861136 21861172 -228826682 + AT_rich Low_complexity Low_complexity 1 36 0 2218 93 3 7 chr2 21861860 21862151 -228825703 - AluSg1 SINE Alu -19 290 1 382 309 164 5 chr2 21863876 21864077 -228823777 + MIR SINE MIR 9 241 -21 244 192 58 0 chr2 21864307 21864359 -228823495 + MER3 DNA MER1_type 36 90 -119 * 829 218 5 35 chr2 21864329 21864526 -228823328 - MER3 DNA MER1_type -13 196 6 237 297 126 0 chr2 21866079 21866190 -228821664 - Charlie8 DNA MER1_type -2215 202 78 279 302 40 24 chr2 21866375 21866501 -228821353 + MIR SINE MIR 20 147 -61 201 314 49 29 chr2 21867658 21867760 -228820094 + MIR SINE MIR 97 200 -62 488 322 49 11 chr2 21868746 21868929 -228818925 + MIR SINE MIR 4 193 -69 1757 169 0 7 chr2 21869210 21869488 -228818366 - AluJb SINE Alu -23 289 14 315 246 22 84 chr2 21869855 21869996 -228817858 + MIR SINE MIR 32 162 -46 222 321 46 46 chr2 21871722 21871853 -228816001 - MIR3 SINE MIR -41 167 37 1965 58 4 25 chr2 21873109 21873386 -228814468 + L1PA4 LINE L1 5882 6152 -3 275 141 0 42 chr2 21873419 21873490 -228814364 + L1MA7 LINE L1 6223 6290 -1 21 57 0 0 chr2 21873490 21873525 -228814329 + AT_rich Low_complexity Low_complexity 1 35 0 280 191 0 0 chr2 21873620 21873667 -228814187 - L2 LINE L2 -9 3304 3258 511 180 0 6 chr2 21873726 21873834 -228814020 - L1ME2 LINE L1 -2 6332 6073 285 253 147 27 chr2 21874192 21874342 -228813512 - MIR SINE MIR -78 184 17 195 42 0 0 chr2 21874394 21874418 -228813436 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 414 295 152 35 chr2 21875512 21876057 -228811797 + L1ME4a LINE L1 5258 5866 -255 321 270 143 32 chr2 21876471 21876597 -228811257 - MER91B DNA MER1_type -11 179 40 190 298 88 35 chr2 21876921 21877035 -228810819 + MIR SINE MIR 131 250 -12 297 0 0 0 chr2 21877356 21877389 -228810465 + (TG)n Simple_repeat Simple_repeat 2 34 0 596 40 13 0 chr2 21878343 21878419 -228809435 + L1PA10 LINE L1 6091 6167 -1 185 273 52 26 chr2 21879435 21879512 -228808342 - L2 LINE L2 -12 3260 3182 * 296 254 140 18 chr2 21879500 21879614 -228808240 - MIR SINE MIR -95 167 40 289 357 36 0 chr2 21879826 21879938 -228807916 + L2 LINE L2 3157 3272 0 1765 120 33 0 chr2 21880919 21881195 -228806659 + L1PB2 LINE L1 5864 6148 -3 427 216 94 35 chr2 21881218 21881528 -228806326 - LTR48 LTR ERV1 -1 739 284 207 167 0 0 chr2 21881746 21881782 -228806072 + (TAG)n Simple_repeat Simple_repeat 3 38 0 285 213 38 12 chr2 21882987 21883067 -228804787 + L1ME2 LINE L1 1269 1350 -5073 * 290 234 209 6 chr2 21883062 21883220 -228804634 + L1ME2 LINE L1 3097 3286 -3655 733 297 87 77 chr2 21883220 21883995 -228803859 + L1MB5 LINE L1 3 784 -5758 2959 248 38 7 chr2 21884206 21885157 -228802697 + L1MB5 LINE L1 1328 2406 -4240 5496 248 24 76 chr2 21885172 21887511 -228800343 + L1MB5 LINE L1 3238 5455 -1189 2433 171 37 4 chr2 21887511 21888001 -228799853 + L1MA5 LINE L1 5795 6300 0 1884 167 0 0 chr2 21888023 21888335 -228799519 + AluSx SINE Alu 1 312 0 3889 228 28 25 chr2 21888466 21889694 -228798160 + L1MB5 LINE L1 5441 6664 -8 4844 255 73 50 chr2 21889703 21891445 -228796409 + L1ME2 LINE L1 3268 5099 -1842 1955 128 4 4 chr2 21891445 21891749 -228796105 + AluSg SINE Alu 1 304 0 4844 255 73 50 chr2 21891749 21892726 -228795128 + L1ME2 LINE L1 5099 6052 -889 378 0 0 0 chr2 21892726 21892768 -228795086 + (TA)n Simple_repeat Simple_repeat 1 42 0 2226 243 32 61 chr2 21892871 21893719 -228794135 + L1ME2 LINE L1 6113 6935 -24 252 345 137 13 chr2 21893874 21894100 -228793754 - MIR SINE MIR -1 261 8 297 339 51 21 chr2 21894253 21894489 -228793365 + L1ME LINE L1 6212 6454 -505 342 278 46 19 chr2 21896072 21896180 -228791674 + MIR SINE MIR 81 191 -71 518 351 85 37 chr2 21896555 21897097 -228790757 + L2 LINE L2 2141 2708 -606 207 349 139 16 chr2 21897304 21897433 -228790421 + L2 LINE L2 3034 3178 -94 602 281 46 10 chr2 21898484 21898680 -228789174 + MIR SINE MIR 2 204 -58 185 170 0 113 chr2 21898706 21898730 -228789124 + MIR SINE MIR 201 217 -45 2074 133 44 22 chr2 21898730 21899097 -228788757 - THE1C LTR MaLR 0 375 1 185 170 0 113 chr2 21899097 21899125 -228788729 + MIR SINE MIR 217 247 -15 213 354 25 0 chr2 21899684 21899763 -228788091 - L2 LINE L2 -2 3270 3190 1544 158 4 8 chr2 21899765 21900012 -228787842 + AluSx SINE Alu 1 246 -66 1011 161 0 0 chr2 21900028 21900208 -228787646 + (TA)n Simple_repeat Simple_repeat 1 180 0 297 239 23 0 chr2 21900215 21900303 -228787551 - L1MC4 LINE L1 -1339 6703 6614 237 303 0 0 chr2 21900295 21900384 -228787470 + L1MC4 LINE L1 6614 6702 -1340 * 264 209 121 0 chr2 21900349 21900440 -228787414 - L1MC4 LINE L1 -1339 6703 6602 261 138 11 23 chr2 21900478 21900565 -228787289 + (TA)n Simple_repeat Simple_repeat 1 86 0 234 274 9 9 chr2 21900565 21900671 -228787183 - L1MC4 LINE L1 -1323 6719 6614 268 354 145 36 chr2 21901161 21901209 -228786645 - L2 LINE L2 -666 2648 2607 1957 225 65 54 chr2 21901209 21901840 -228786014 - LTR48B LTR ERV1 -4 640 3 268 354 145 36 chr2 21901840 21902455 -228785399 - L2 LINE L2 -707 2607 1913 4088 114 21 6 chr2 21902651 21903275 -228784579 - MER41B LTR ERV1 -2 633 1 2729 205 98 13 chr2 21904681 21905387 -228782467 - L1MC3 LINE L1 -15 7770 7005 4623 145 30 18 chr2 21905388 21906210 -228781644 + L1PB3 LINE L1 5322 6153 -1 620 141 5 174 chr2 21906218 21906431 -228781423 - L1MC3 LINE L1 -785 7000 6824 238 288 0 0 chr2 21906444 21906517 -228781337 + L1MC4 LINE L1 6624 6696 -1346 255 31 0 0 chr2 21906517 21906549 -228781305 + (TG)n Simple_repeat Simple_repeat 1 32 0 999 221 0 71 chr2 21906549 21906783 -228781071 - L1MC3 LINE L1 -977 6808 6596 1528 175 51 31 chr2 21906783 21907075 -228780779 + AluJo SINE Alu 7 304 -8 999 221 0 71 chr2 21907075 21907120 -228780734 - L1MC3 LINE L1 -1189 6596 6549 925 159 33 11 chr2 21907122 21907304 -228780550 + MSTB2 LTR MaLR 272 457 0 3620 195 37 36 chr2 21907326 21908259 -228779595 - L1MC3 LINE L1 -748 5398 5276 893 237 64 10 chr2 21908326 21908621 -228779233 - L1MC3 LINE L1 -857 5289 4979 411 224 0 9 chr2 21908642 21908758 -228779096 + CT-rich Low_complexity Low_complexity 3 117 0 722 277 75 0 chr2 21908763 21909030 -228778824 - L1MC3 LINE L1 -1213 4933 4647 180 0 0 0 chr2 21909030 21909050 -228778804 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1137 222 13 0 chr2 21909063 21909297 -228778557 - AluJb SINE Alu -43 269 33 1481 278 30 4 chr2 21909297 21909823 -228778031 - L1MC3 LINE L1 -1490 4656 4117 1238 222 27 7 chr2 21909844 21910137 -228777717 - L1MC3 LINE L1 -1999 4147 3849 718 264 19 11 chr2 21910141 21910402 -228777452 + L1MB8 LINE L1 3185 3447 -2699 1737 158 152 8 chr2 21910403 21910777 -228777077 + MSTA LTR MaLR 1 428 0 633 239 30 30 chr2 21910824 21911025 -228776829 + L1MB8 LINE L1 3636 3836 -2310 22 0 0 0 chr2 21912244 21912266 -228775588 + AT_rich Low_complexity Low_complexity 1 22 0 298 264 28 19 chr2 21912543 21912649 -228775205 - MER89-int LTR ERV1 -4454 2347 2241 38 22 0 0 chr2 21913010 21913055 -228774799 + AT_rich Low_complexity Low_complexity 1 45 0 2434 246 31 20 chr2 21913120 21913933 -228773921 + L1MB8 LINE L1 4335 5156 -990 7182 208 25 8 chr2 21913957 21915360 -228772494 + L1MA2 LINE L1 15 1441 -6124 6814 154 27 9 chr2 21915360 21917043 -228770811 + L1MA2 LINE L1 2505 4219 -3346 * 9896 159 18 14 chr2 21917040 21919974 -228767880 + L1MA2 LINE L1 4776 7723 0 2072 233 102 45 chr2 21919990 21920960 -228766894 + L1MB8 LINE L1 5150 6176 -2 3650 202 42 28 chr2 21921180 21922144 -228765710 - L1MB7 LINE L1 -21 6163 5182 1359 240 11 3 chr2 21922144 21922431 -228765423 - AluJo SINE Alu -23 289 1 3650 202 42 28 chr2 21922431 21922839 -228765015 - L1MB7 LINE L1 -1002 5182 4781 2175 112 0 3 chr2 21923140 21923435 -228764419 + AluSc SINE Alu 1 294 -15 209 270 68 0 chr2 21924638 21924712 -228763142 - MIR SINE MIR -102 160 82 258 323 21 0 chr2 21925653 21925749 -228762105 + MLT1I-int LTR MaLR 1012 1109 -262 1986 142 3 0 chr2 21926854 21927150 -228760704 + AluSx SINE Alu 1 297 -15 288 231 0 0 chr2 21927624 21927702 -228760152 + (TA)n Simple_repeat Simple_repeat 1 78 0 395 257 57 9 chr2 21928038 21928143 -228759711 - MER20 DNA MER1_type -6 213 104 237 132 0 0 chr2 21928170 21928208 -228759646 + (TA)n Simple_repeat Simple_repeat 1 38 0 280 324 27 0 chr2 21928212 21928323 -228759531 + L1MC4 LINE L1 6614 6727 -1315 235 345 36 50 chr2 21928648 21928787 -228759067 + L2 LINE L2 3177 3313 0 2095 119 6 13 chr2 21928879 21929191 -228758663 - AluY SINE Alu -1 310 1 21 36 0 0 chr2 21930184 21930212 -228757642 + AT_rich Low_complexity Low_complexity 1 28 0 268 82 20 20 chr2 21930435 21930484 -228757370 + (GA)n Simple_repeat Simple_repeat 2 50 0 393 287 154 47 chr2 21930973 21931252 -228756602 - L2 LINE L2 0 3313 3005 318 280 16 64 chr2 21931631 21931756 -228756098 + MLT1I LTR MaLR 119 237 -172 2206 125 0 0 chr2 21931901 21932212 -228755642 - AluSx SINE Alu -1 311 1 433 323 213 24 chr2 21933227 21933852 -228754002 + L2 LINE L2 1749 2491 -823 2100 127 3 0 chr2 21934034 21934334 -228753520 - AluSp SINE Alu -12 301 1 324 295 8 78 chr2 21934553 21934682 -228753172 + L2 LINE L2 2934 3053 -219 383 312 41 7 chr2 21935611 21935762 -228752092 - MIR SINE MIR -56 206 52 181 250 0 0 chr2 21936050 21936090 -228751764 - L2 LINE L2 0 3313 3274 28 48 0 0 chr2 21936666 21936708 -228751146 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr2 21937207 21937237 -228750617 + AT_rich Low_complexity Low_complexity 1 30 0 2212 68 7 23 chr2 21937748 21938055 -228749799 + AluY SINE Alu 1 302 -9 1316 191 165 45 chr2 21938436 21938818 -228749036 - MSTC LTR MaLR 0 428 1 21 36 0 0 chr2 21938923 21938951 -228748903 + AT_rich Low_complexity Low_complexity 1 28 0 323 245 88 0 chr2 21939097 21939199 -228748655 + MIR SINE MIR 151 261 -1 1744 253 90 21 chr2 21939912 21940738 -228747116 - L1M4 LINE L1 -2743 3403 2521 3639 51 32 0 chr2 21942208 21942678 -228745176 - L1PA7 LINE L1 -10 6144 5660 648 172 0 0 chr2 21942716 21942838 -228745016 + pTR5 LTR ERV1 741 862 -1576 1723 204 30 16 chr2 21942949 21943321 -228744533 + L1PB4 LINE L1 5751 6127 -29 1086 123 7 0 chr2 21943321 21943475 -228744379 + AluSx SINE Alu 1 155 -157 1549 111 0 40 chr2 21943500 21943726 -228744128 + AluSg SINE Alu 63 279 -31 234 105 0 0 chr2 21943755 21943793 -228744061 + L1PB4 LINE L1 6112 6149 -7 23 54 0 0 chr2 21945823 21945860 -228741994 + AT_rich Low_complexity Low_complexity 1 37 0 438 188 36 0 chr2 21945865 21946030 -228741824 + (TA)n Simple_repeat Simple_repeat 1 171 0 241 242 22 0 chr2 21947344 21947435 -228740419 + CT-rich Low_complexity Low_complexity 3 95 0 21 0 0 0 chr2 21948940 21948961 -228738893 + AT_rich Low_complexity Low_complexity 1 21 0 2223 97 0 0 chr2 21950415 21950704 -228737150 - AluSq SINE Alu -24 289 1 3063 313 70 17 chr2 21951005 21952285 -228735569 + L2 LINE L2 1249 2596 -718 691 276 154 6 chr2 21952285 21952919 -228734935 - L1ME LINE L1 -557 5607 4881 378 319 89 45 chr2 21953341 21953633 -228734221 + L1MB8 LINE L1 5260 5564 -2244 321 333 35 23 chr2 21953689 21953863 -228733991 - MIR SINE MIR -72 190 15 215 333 24 0 chr2 21955125 21955209 -228732645 - MIR SINE MIR -124 138 53 265 333 11 0 chr2 21955391 21955481 -228732373 + GA-rich Low_complexity Low_complexity 6 96 0 301 323 8 8 chr2 21955790 21955920 -228731934 - L1ME LINE L1 -469 5652 5523 351 0 0 0 chr2 21955929 21955968 -228731886 + (TA)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr2 21956066 21956094 -228731760 + AT_rich Low_complexity Low_complexity 1 28 0 23 78 0 0 chr2 21956192 21956243 -228731611 + AT_rich Low_complexity Low_complexity 1 51 0 253 245 116 19 chr2 21956244 21956399 -228731455 - MER69 DNA AcHobo -167 2359 2190 813 221 11 16 chr2 21956466 21956656 -228731198 + L1MB8 LINE L1 5988 6176 -2 2232 105 0 3 chr2 21956669 21956975 -228730879 + AluSx SINE Alu 1 305 -7 529 233 63 11 chr2 21956985 21957174 -228730680 - MER69 DNA AcHobo -327 2199 2001 415 304 15 0 chr2 21957221 21957356 -228730498 - MER69 DNA AcHobo -1899 627 491 4683 177 40 20 chr2 21957384 21957433 -228730421 - L1MA8 LINE L1 -10 6281 6234 1591 213 18 6 chr2 21957433 21957771 -228730083 + MER2 DNA MER2_type 1 342 -2 4683 177 40 20 chr2 21957771 21958889 -228728965 - L1MA8 LINE L1 -57 6234 5088 604 184 86 0 chr2 21958925 21959047 -228728807 - L1MA8 LINE L1 -1616 4530 4391 390 21 0 0 chr2 21959047 21959094 -228728760 + (TG)n Simple_repeat Simple_repeat 2 48 0 604 184 86 0 chr2 21959094 21959123 -228728731 - L1MA8 LINE L1 -1755 4391 4366 2694 177 29 89 chr2 21959127 21959827 -228728027 - L1 LINE L1 -1065 5263 4606 3380 177 75 18 chr2 21959900 21960787 -228727067 - L1 LINE L1 -2400 3928 2991 1243 166 136 58 chr2 21960814 21961292 -228726562 - MER4A LTR ERV1 -19 446 1 1035 229 12 8 chr2 21961292 21961536 -228726318 - L1 LINE L1 -3342 2986 2742 * 1784 262 35 12 chr2 21961530 21962105 -228725749 - L1 LINE L1 -4604 1724 1133 3982 165 31 3 chr2 21962105 21962819 -228725035 - MER50 LTR ERV1 0 734 1 1784 262 35 12 chr2 21962819 21962835 -228725019 - L1 LINE L1 -5195 1133 1119 2346 130 23 8 chr2 21962835 21963188 -228724666 - MER50-int LTR ERV1 -24 7181 6824 604 137 0 21 chr2 21963173 21963268 -228724586 - MER50-int LTR ERV1 -1010 6195 6103 * 3096 128 51 12 chr2 21963269 21963819 -228724035 - MER50-int LTR ERV1 -812 4068 3391 2893 155 6 12 chr2 21963819 21964303 -228723551 - MER50-int LTR ERV1 -3398 1482 1002 5843 149 53 12 chr2 21964321 21966024 -228721830 - MER50-int LTR ERV1 -5351 1854 1 3916 151 29 19 chr2 21966073 21966770 -228721084 - MER50 LTR ERV1 -30 704 1 606 229 23 0 chr2 21966806 21966997 -228720857 - L1 LINE L1 -4240 1088 939 235 97 90 15 chr2 21967001 21967135 -228720719 + (TA)n Simple_repeat Simple_repeat 1 144 0 1280 291 111 38 chr2 21967251 21968026 -228719828 + L1ME2 LINE L1 1177 1894 -4321 1494 207 29 0 chr2 21968026 21968301 -228719553 + AluJo SINE Alu 3 285 -27 1280 291 111 38 chr2 21968301 21969105 -228718749 + L1ME2 LINE L1 1894 2893 -3322 2304 85 3 7 chr2 21969105 21969412 -228718442 - AluY SINE Alu -5 306 1 1280 291 111 38 chr2 21969412 21969699 -228718155 + L1ME2 LINE L1 2893 3158 -3057 216 0 0 0 chr2 21969964 21969988 -228717866 + (TA)n Simple_repeat Simple_repeat 2 25 0 2330 70 20 3 chr2 21969988 21970290 -228717564 - AluSp SINE Alu -6 307 1 1045 279 66 51 chr2 21970421 21971069 -228716785 + L1ME2 LINE L1 3622 4279 -1936 261 289 61 87 chr2 21971074 21971426 -228716428 + L1ME2 LINE L1 4881 5220 -995 1992 136 3 10 chr2 21971426 21971727 -228716127 + AluSp SINE Alu 4 302 -11 261 289 61 87 chr2 21971727 21971835 -228716019 + L1ME2 LINE L1 5220 5329 -886 887 244 31 4 chr2 21971922 21972176 -228715678 + L1ME2 LINE L1 5359 5619 -614 431 223 39 0 chr2 21972248 21972351 -228715503 + L1ME2 LINE L1 5811 5917 -318 557 222 81 9 chr2 21972353 21972574 -228715280 - L1M4 LINE L1 -777 5369 5133 918 254 30 27 chr2 21972599 21972898 -228714956 + L1ME2 LINE L1 5925 6224 -9 2504 181 33 6 chr2 21973101 21973583 -228714271 + Tigger2 DNA MER2_type 1 495 -2223 3824 170 48 19 chr2 21973585 21974420 -228713434 - L1M4 LINE L1 -1156 4990 4132 231 373 37 15 chr2 21974468 21974602 -228713252 - MIR3 SINE MIR -28 180 44 * 1444 263 46 151 chr2 21974600 21975045 -228712809 - L2 LINE L2 -502 2812 2400 403 188 134 0 chr2 21975045 21975157 -228712697 - L1M4 LINE L1 -685 5499 5373 1444 263 46 151 chr2 21975157 21975573 -228712281 - L2 LINE L2 -914 2400 1942 28 0 0 0 chr2 21975815 21975843 -228712011 + AT_rich Low_complexity Low_complexity 1 28 0 3337 228 62 27 chr2 21975934 21977709 -228710145 - L1MB7 LINE L1 -21 6163 4322 303 28 0 0 chr2 21978466 21978502 -228709352 + (TG)n Simple_repeat Simple_repeat 1 36 0 207 309 37 8 chr2 21979515 21979675 -228708179 - MIR SINE MIR -46 216 31 2203 115 0 7 chr2 21980210 21980515 -228707339 - AluSg SINE Alu -7 303 1 1812 248 82 7 chr2 21980530 21981157 -228706697 + L1MB4 LINE L1 4836 5414 -766 195 100 0 0 chr2 21981157 21981187 -228706667 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1812 248 82 7 chr2 21981187 21981798 -228706056 + L1MB4 LINE L1 5414 6178 -2 22 35 0 0 chr2 21982472 21982501 -228705353 + AT_rich Low_complexity Low_complexity 1 29 0 1339 92 0 66 chr2 21983090 21983318 -228704536 + AluY SINE Alu 99 311 0 201 74 0 0 chr2 21983358 21983385 -228704469 + (TTCC)n Simple_repeat Simple_repeat 4 30 0 855 131 0 0 chr2 21983448 21983585 -228704269 + (TCCC)n Simple_repeat Simple_repeat 3 139 0 222 118 0 0 chr2 21983648 21983682 -228704172 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 1690 278 112 3 chr2 21983780 21984528 -228703326 - L1MB7 LINE L1 -1985 4161 3332 3326 253 66 9 chr2 21984535 21985152 -228702702 - L1MC3 LINE L1 -7 7778 7081 2114 142 31 19 chr2 21985152 21985512 -228702342 + THE1B LTR MaLR 1 364 0 3326 253 66 9 chr2 21985512 21985889 -228701965 - L1MC3 LINE L1 -704 7081 6727 675 301 69 19 chr2 21985927 21986346 -228701508 - L1MEc LINE L1 -4258 2138 1699 1446 214 55 16 chr2 21986387 21986751 -228701103 - L1M4 LINE L1 -540 5703 5326 21 0 0 0 chr2 21986779 21986800 -228701054 + AT_rich Low_complexity Low_complexity 1 21 0 1768 295 67 40 chr2 21986803 21988316 -228699538 - L1MEc LINE L1 -4814 1401 45 2002 140 44 16 chr2 21988318 21988683 -228699171 - THE1C LTR MaLR 0 375 1 1812 177 51 24 chr2 21988817 21989300 -228698554 + MLT2A2 LTR ERVL 1 500 -54 248 207 98 0 chr2 21989378 21989460 -228698394 + L1MC4 LINE L1 6614 6703 -1339 198 209 0 0 chr2 21989465 21989508 -228698346 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 229 250 71 0 chr2 21989508 21989592 -228698262 + L1MC4 LINE L1 6614 6703 -1339 788 212 8 8 chr2 21989592 21989847 -228698007 + (TATATG)n Simple_repeat Simple_repeat 1 255 0 235 247 26 0 chr2 21989847 21989924 -228697930 + L1MCa LINE L1 2006 2084 -4342 182 0 105 0 chr2 21989960 21989998 -228697856 + (TA)n Simple_repeat Simple_repeat 1 42 0 1015 258 106 58 chr2 21990005 21990635 -228697219 - L1ME LINE L1 -439 5723 5071 1690 228 24 40 chr2 21990660 21991093 -228696761 - MLT2B2 LTR ERVL 0 397 1 1128 285 136 36 chr2 21991116 21991216 -228696638 - L1ME LINE L1 -1156 4990 4901 2347 73 0 55 chr2 21991216 21991543 -228696311 - AluSc SINE Alu 0 309 1 1128 285 136 36 chr2 21991543 21992462 -228695392 - L1ME LINE L1 -1245 4901 3869 21 0 0 0 chr2 21992590 21992611 -228695243 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 21993195 21993218 -228694636 + AT_rich Low_complexity Low_complexity 1 23 0 2039 170 62 79 chr2 21993690 21994237 -228693617 - L1MA10 LINE L1 -8 6326 5789 3095 104 143 138 chr2 21994975 21996269 -228691585 + pTR5 LTR ERV1 827 2438 0 499 203 262 0 chr2 21997791 21997858 -228689996 - MER46A DNA MER2_type -2495 236 188 1585 151 12 12 chr2 21997858 21998116 -228689738 + AluSx SINE Alu 44 301 -11 499 203 262 0 chr2 21998116 21998235 -228689619 - MER46A DNA MER2_type -2543 188 1 23 33 0 0 chr2 21999277 21999307 -228688547 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 21999492 21999515 -228688339 + AT_rich Low_complexity Low_complexity 1 23 0 1973 128 67 20 chr2 22000702 22001060 -228686794 + THE1C LTR MaLR 1 375 0 264 391 106 21 chr2 22001230 22001949 -228685905 + L2 LINE L2 854 1633 -1681 297 291 44 50 chr2 22002344 22002526 -228685328 + L2 LINE L2 1978 2158 -1156 637 209 6 55 chr2 22003714 22003850 -228684004 - AluJo/FRAM SINE Alu -8 294 166 2033 70 4 33 chr2 22003850 22004121 -228683733 + AluY SINE Alu 34 296 -15 637 209 6 55 chr2 22004121 22004147 -228683707 - AluJo/FRAM SINE Alu -136 166 140 278 180 16 0 chr2 22004162 22004223 -228683631 + (TA)n Simple_repeat Simple_repeat 2 63 0 297 0 0 0 chr2 22004226 22004259 -228683595 + (CA)n Simple_repeat Simple_repeat 2 34 0 399 326 49 33 chr2 22004871 22005055 -228682799 + L3 LINE CR1 922 1108 -469 27 29 0 0 chr2 22005541 22005575 -228682279 + AT_rich Low_complexity Low_complexity 1 34 0 291 175 0 0 chr2 22005855 22005912 -228681942 + (TATG)n Simple_repeat Simple_repeat 3 59 0 26 30 0 0 chr2 22006318 22006351 -228681503 + AT_rich Low_complexity Low_complexity 1 33 0 22 80 0 0 chr2 22006828 22006878 -228680976 + AT_rich Low_complexity Low_complexity 1 50 0 243 0 0 0 chr2 22008518 22008545 -228679309 + (TC)n Simple_repeat Simple_repeat 2 28 0 345 47 0 0 chr2 22008559 22008602 -228679252 + (GA)n Simple_repeat Simple_repeat 1 43 0 336 24 0 0 chr2 22009471 22009512 -228678342 + (CA)n Simple_repeat Simple_repeat 1 41 0 614 385 64 19 chr2 22009986 22010469 -228677385 + L3 LINE CR1 1071 1575 -2 22 35 0 0 chr2 22010551 22010580 -228677274 + AT_rich Low_complexity Low_complexity 1 29 0 745 296 39 35 chr2 22010798 22011109 -228676745 + ERVL LTR ERVL 1101 1412 -3584 333 250 0 38 chr2 22011349 22011429 -228676425 + ERVL LTR ERVL 1756 1832 -3164 471 204 102 12 chr2 22011449 22011616 -228676238 + MER53 DNA DNA 8 189 0 524 338 75 24 chr2 22011619 22011912 -228675942 + ERVL LTR ERVL 1968 2275 -2721 2017 266 64 26 chr2 22011913 22012705 -228675149 + L1MB5 LINE L1 4017 4838 -1308 1754 185 37 87 chr2 22012705 22012800 -228675054 + MLT1C LTR MaLR 1 99 -368 1819 181 44 16 chr2 22012800 22013165 -228674689 - THE1C LTR MaLR 0 375 1 1754 185 37 87 chr2 22013165 22013561 -228674293 + MLT1C LTR MaLR 99 467 0 3605 217 80 3 chr2 22013561 22014782 -228673072 + L1MB5 LINE L1 4834 6157 -17 24 53 0 0 chr2 22014785 22014823 -228673031 + AT_rich Low_complexity Low_complexity 1 38 0 2220 326 16 6 chr2 22014823 22015685 -228672169 + ERVL LTR ERVL 2285 2986 -2010 732 326 42 43 chr2 22015694 22016311 -228671543 + ERVL LTR ERVL 3131 3535 -1461 671 336 59 23 chr2 22016450 22016844 -228671010 + ERVL LTR ERVL 4039 4481 -1283 498 315 14 18 chr2 22016955 22017174 -228670680 + ERVL LTR ERVL 4665 4882 -603 684 333 35 31 chr2 22017315 22017771 -228670083 + ERVL LTR ERVL 4887 5344 -310 366 325 73 7 chr2 22017891 22018042 -228669812 + LTR16B LTR ERVL 1 161 -303 240 333 75 0 chr2 22018284 22018377 -228669477 + L1MC4a LINE L1 5486 5585 -579 332 300 100 33 chr2 22019295 22019505 -228668349 + L1MC4a LINE L1 5676 5899 -1909 307 128 0 0 chr2 22019510 22019557 -228668297 - MADE1 DNA Mariner 0 80 34 4891 171 38 10 chr2 22019755 22020762 -228667092 - L1MA8 LINE L1 -17 6274 5231 640 226 75 44 chr2 22020763 22020922 -228666932 + FRAM SINE Alu 1 164 -12 5051 191 36 25 chr2 22020922 22021752 -228666102 - L1MA8 LINE L1 -909 5237 4388 189 0 0 0 chr2 22021752 22021773 -228666081 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 5051 191 36 25 chr2 22021773 22022150 -228665704 - L1MA8 LINE L1 -1758 4388 4017 1955 123 67 58 chr2 22022150 22022580 -228665274 + L1MA4 LINE L1 5866 6299 -1 1318 206 88 31 chr2 22022580 22023056 -228664798 + L1 LINE L1 3041 3543 -2603 1447 147 16 0 chr2 22073056 22073308 -228614546 + MER44D DNA MER2_type 294 604 -1 22 80 0 0 chr2 22073410 22073460 -228614394 + AT_rich Low_complexity Low_complexity 1 50 0 525 253 91 97 chr2 22073467 22073985 -228613869 + MLT1H LTR MaLR 8 522 -27 206 238 60 24 chr2 22074052 22074136 -228613718 - MIR SINE MIR -56 206 120 375 304 27 40 chr2 22074366 22074486 -228613368 - MER102b DNA MER1_type -1090 338 221 2400 94 3 0 chr2 22074486 22074795 -228613059 + AluSp SINE Alu 3 312 -1 375 304 27 40 chr2 22074795 22074898 -228612956 - MER102b DNA MER1_type -1207 221 118 847 161 7 0 chr2 22075030 22075167 -228612687 + FLAM_C SINE Alu 1 138 -5 2173 131 3 0 chr2 22076928 22077233 -228610621 + AluSg SINE Alu 1 306 -4 213 175 0 0 chr2 22077600 22077640 -228610214 + (TG)n Simple_repeat Simple_repeat 1 40 0 232 136 121 0 chr2 22078374 22078440 -228609414 - L1MA7 LINE L1 -2 6289 6216 593 218 8 8 chr2 22078655 22078779 -228609075 - L2 LINE L2 0 3313 3190 1417 204 33 41 chr2 22078907 22079275 -228608579 + MLT1A1 LTR MaLR 1 365 0 257 323 123 13 chr2 22079384 22079539 -228608315 + MIR SINE MIR 50 221 -41 471 248 99 8 chr2 22079916 22080037 -228607817 + L2 LINE L2 3137 3268 -4 2185 147 0 0 chr2 22080274 22080586 -228607268 - AluSx SINE Alu 0 312 1 256 312 0 65 chr2 22081569 22081662 -228606192 - L2 LINE L2 -2 3311 3225 363 44 0 0 chr2 22081858 22081903 -228605951 + (TG)n Simple_repeat Simple_repeat 1 45 0 294 106 0 0 chr2 22081903 22081950 -228605904 + (GA)n Simple_repeat Simple_repeat 2 48 0 235 271 29 0 chr2 22082506 22082576 -228605278 + L1ME3 LINE L1 6062 6133 -29 2049 140 0 0 chr2 22083440 22083726 -228604128 + AluSx SINE Alu 3 288 -24 334 321 54 45 chr2 22085489 22085713 -228602141 + MIR SINE MIR 28 253 -9 327 333 145 0 chr2 22085759 22085876 -228601978 - L2 LINE L2 -2 3270 3137 2192 116 3 0 chr2 22086196 22086490 -228601364 + AluSg SINE Alu 1 295 -15 281 252 134 42 chr2 22086633 22086752 -228601102 - MIR3 SINE MIR -78 130 1 403 274 94 33 chr2 22086795 22087007 -228600847 - MIR SINE MIR -2 260 36 189 381 103 0 chr2 22087484 22087581 -228600273 + L2 LINE L2 2945 3051 -221 567 280 111 69 chr2 22088266 22088645 -228599209 - L2 LINE L2 -4 3309 2915 208 299 68 41 chr2 22089152 22089299 -228598555 - L2 LINE L2 0 3313 3163 1128 164 38 0 chr2 22089481 22089694 -228598160 + Tigger2 DNA MER2_type 2498 2718 0 1323 245 33 27 chr2 22089742 22090110 -228597744 + MLT1A2 LTR MaLR 5 374 0 184 77 51 0 chr2 22093312 22093351 -228594503 + A-rich Low_complexity Low_complexity 2 42 0 375 202 25 17 chr2 22096452 22096571 -228591283 + GA-rich Low_complexity Low_complexity 4 123 0 410 285 23 23 chr2 22096786 22097000 -228590854 - L1MEd LINE L1 -4923 1196 983 4092 148 73 14 chr2 22097062 22097844 -228590010 - L1PA16 LINE L1 0 6166 5339 2092 115 7 0 chr2 22097844 22098139 -228589715 + AluSc SINE Alu 1 297 -12 427 91 39 0 chr2 22098139 22098216 -228589638 + GA-rich Low_complexity Low_complexity 4 83 0 507 129 63 12 chr2 22098227 22098362 -228589492 - L1 LINE L1 -795 5351 5211 1734 181 122 13 chr2 22098467 22098853 -228589001 + MSTA LTR MaLR 1 428 0 2454 71 0 0 chr2 22099076 22099372 -228588482 + AluY SINE Alu 1 296 -15 511 345 112 32 chr2 22100110 22100530 -228587324 - HAL1 LINE L1 -741 1766 1300 2471 118 39 15 chr2 22100530 22100919 -228586935 - MER48 LTR ERV1 0 398 1 511 345 112 32 chr2 22100919 22100991 -228586863 - HAL1 LINE L1 -1207 1300 1235 480 292 52 77 chr2 22100996 22101492 -228586362 - L1MEd LINE L1 -5013 1106 623 380 276 84 61 chr2 22101798 22102012 -228585842 - L1MEd LINE L1 -5890 229 11 23 0 0 0 chr2 22102597 22102620 -228585234 + AT_rich Low_complexity Low_complexity 1 23 0 747 251 18 44 chr2 22103243 22103470 -228584384 + MER58A DNA MER1_type 3 223 -1 896 290 77 8 chr2 22103592 22103954 -228583900 + MLT1I LTR MaLR 1 387 -22 452 296 103 14 chr2 22104633 22105129 -228582725 + L1ME4a LINE L1 5526 6065 -56 204 283 35 9 chr2 22105222 22105335 -228582519 + (TA)n Simple_repeat Simple_repeat 2 117 0 5050 114 2 14 chr2 22105464 22106261 -228581593 - L1PA15 LINE L1 -9 6156 5369 27 96 0 0 chr2 22106427 22106510 -228581344 + AT_rich Low_complexity Low_complexity 1 83 0 1048 211 13 50 chr2 22106511 22106814 -228581040 - L1MA10 LINE L1 -13 6321 6030 186 300 0 0 chr2 22106815 22106865 -228580989 + L2 LINE L2 2709 2758 -556 438 236 0 9 chr2 22107060 22107166 -228580688 - L1PB4 LINE L1 -26 6130 6026 272 264 69 19 chr2 22107851 22108010 -228579844 - L1ME LINE L1 -349 5772 5606 25 31 0 0 chr2 22109323 22109355 -228578499 + AT_rich Low_complexity Low_complexity 1 32 0 32 26 0 0 chr2 22109900 22109939 -228577915 + AT_rich Low_complexity Low_complexity 1 39 0 639 243 88 4 chr2 22110018 22110244 -228577610 - LTR37B LTR ERV1 0 468 224 1981 114 57 4 chr2 22110475 22110756 -228577098 + AluSx SINE Alu 1 296 -16 225 274 0 20 chr2 22110986 22111037 -228576817 - L2 LINE L2 -6 3266 3217 1969 135 4 0 chr2 22112103 22112384 -228575470 + AluSx SINE Alu 14 295 -17 189 348 128 68 chr2 22112900 22113150 -228574704 - L2 LINE L2 -82 3190 2926 1837 190 19 27 chr2 22115306 22115674 -228572180 + MLT1A1 LTR MaLR 1 365 0 295 211 29 115 chr2 22115735 22115839 -228572015 - MLT1H LTR MaLR 0 549 455 387 0 0 0 chr2 22116653 22116696 -228571158 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 297 0 0 0 chr2 22116698 22116731 -228571123 + (TG)n Simple_repeat Simple_repeat 2 34 0 277 208 0 0 chr2 22118417 22118465 -228569389 - L2 LINE L2 -4 3309 3262 233 130 43 0 chr2 22118956 22119002 -228568852 + CT-rich Low_complexity Low_complexity 3 50 0 2862 234 71 23 chr2 22120578 22121286 -228566568 - MER21B LTR ERV1 -105 758 17 1848 85 19 4 chr2 22121470 22121728 -228566126 + L1PA14 LINE L1 5900 6161 0 * 10371 32 1 10 chr2 22121726 22123746 -228564108 + L1PA4 LINE L1 4143 6155 0 1914 142 92 19 chr2 22123749 22124109 -228563745 + LTR49 LTR ERV1 134 519 -76 21 0 0 0 chr2 22124416 22124437 -228563417 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 22124534 22124559 -228563295 + AT_rich Low_complexity Low_complexity 1 25 0 252 0 0 0 chr2 22124838 22124866 -228562988 + (A)n Simple_repeat Simple_repeat 1 28 0 869 183 52 92 chr2 22125216 22125445 -228562409 + Tigger5 DNA MER2_type 1 220 -2103 * 1729 138 4 0 chr2 22125437 22125705 -228562149 + Tigger5 DNA MER2_type 2054 2322 -1 445 321 144 23 chr2 22126819 22127255 -228560599 - L1MEd LINE L1 -2563 3566 3078 361 245 172 81 chr2 22127256 22127517 -228560337 + MLT1E2 LTR MaLR 1 285 -341 581 286 104 58 chr2 22127859 22128447 -228559407 - L1MEd LINE L1 -5041 1078 464 2228 114 0 16 chr2 22128796 22129104 -228558750 - AluSg SINE Alu -7 303 1 458 317 35 15 chr2 22129135 22129334 -228558520 + L2 LINE L2 3111 3313 0 244 298 36 0 chr2 22129340 22129424 -228558430 + (CATA)n Simple_repeat Simple_repeat 2 88 0 286 284 162 27 chr2 22130003 22130151 -228557703 + MIR3 SINE MIR 31 198 -10 471 259 6 29 chr2 22130731 22130901 -228556953 + L1M4 LINE L1 3272 3437 -2709 201 369 36 18 chr2 22131505 22131616 -228556238 + MIR SINE MIR 4 116 -146 234 81 0 0 chr2 22131675 22131712 -228556142 + (TA)n Simple_repeat Simple_repeat 1 37 0 3537 175 46 23 chr2 22132431 22133432 -228554422 - L1MA7 LINE L1 -258 6033 5013 802 268 49 25 chr2 22133446 22133689 -228554165 - MIR SINE MIR -8 254 6 7025 61 27 0 chr2 22133904 22134932 -228552922 - L1PA8 LINE L1 -1 6171 5139 233 377 23 23 chr2 22134973 22135103 -228552751 - MIR SINE MIR -126 136 7 627 354 93 42 chr2 22136440 22137293 -228550561 - L2 LINE L2 -457 2857 1962 338 204 11 0 chr2 22137390 22137483 -228550371 + GA-rich Low_complexity Low_complexity 6 99 0 3397 195 43 65 chr2 22138490 22139400 -228548454 - L1MC1 LINE L1 0 7764 6137 26 50 0 0 chr2 22139507 22139547 -228548307 + AT_rich Low_complexity Low_complexity 1 40 0 1431 36 6 10 chr2 22139655 22139904 -228547950 + L1PA3 LINE L1 5955 6176 0 704 344 126 44 chr2 22140140 22141130 -228546724 + L1ME LINE L1 3 1073 -5046 927 265 57 43 chr2 22141209 22141833 -228546021 + L1ME3A LINE L1 5144 5777 -393 399 274 22 34 chr2 22141860 22142039 -228545815 + L1ME3A LINE L1 5851 6028 -135 478 309 91 17 chr2 22142055 22142405 -228545449 + L1ME LINE L1 4357 4732 -1397 229 263 124 21 chr2 22142512 22142706 -228545148 + L1ME LINE L1 4911 5124 -1005 575 272 138 19 chr2 22142966 22143286 -228544568 + L1ME LINE L1 5419 5776 -369 279 212 0 0 chr2 22143984 22144050 -228543804 + MER116 DNA Mariner 6 71 -9 580 235 37 27 chr2 22145133 22145428 -228542426 - MLT1I LTR MaLR -17 392 79 21 36 0 0 chr2 22147263 22147291 -228540563 + AT_rich Low_complexity Low_complexity 1 28 0 2514 71 3 0 chr2 22148712 22149022 -228538832 - AluY SINE Alu 0 311 1 26 30 0 0 chr2 22149416 22149449 -228538405 + AT_rich Low_complexity Low_complexity 1 33 0 458 310 32 7 chr2 22151851 22152006 -228535848 + MIR SINE MIR 50 208 -54 26 64 0 0 chr2 22152504 22152551 -228535303 + AT_rich Low_complexity Low_complexity 1 47 0 270 365 78 9 chr2 22153087 22153202 -228534652 - L2 LINE L2 -21 3251 3129 381 324 45 80 chr2 22154427 22154804 -228533050 - L2 LINE L2 -824 2490 2127 1719 248 68 7 chr2 22155851 22156307 -228531547 - MER119 DNA MER1_type -99 484 1 396 179 0 0 chr2 22156608 22156686 -228531168 + (TA)n Simple_repeat Simple_repeat 1 78 0 186 314 119 17 chr2 22156925 22157043 -228530811 + MIR3 SINE MIR 13 142 -66 183 42 0 0 chr2 22157350 22157374 -228530480 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1645 186 25 35 chr2 22157621 22158025 -228529829 - L1MA7 LINE L1 -7 6284 5885 2058 200 59 15 chr2 22159788 22160032 -228527822 + LOR1a LTR ERV1 1 233 -264 1843 133 0 0 chr2 22160032 22160296 -228527558 - AluSx SINE Alu -14 298 35 2058 200 59 15 chr2 22160296 22160527 -228527327 + LOR1a LTR ERV1 233 497 0 1135 203 7 27 chr2 22161706 22162002 -228525852 - L1MA4 LINE L1 0 6300 6011 305 336 28 9 chr2 22163653 22163760 -228524094 + MER5A DNA MER1_type 36 144 -45 408 288 18 59 chr2 22164638 22164808 -228523046 - L2 LINE L2 -4 3309 3147 * 466 283 131 5 chr2 22164806 22165004 -228522850 + MIR SINE MIR 34 256 -6 215 254 17 0 chr2 22165105 22165164 -228522690 + (CATA)n Simple_repeat Simple_repeat 2 61 0 180 111 0 0 chr2 22165178 22165205 -228522649 + (TA)n Simple_repeat Simple_repeat 1 27 0 195 188 0 0 chr2 22165216 22165264 -228522590 + (CATA)n Simple_repeat Simple_repeat 2 49 0 22 35 0 0 chr2 22165878 22165907 -228521947 + AT_rich Low_complexity Low_complexity 1 29 0 204 350 86 8 chr2 22166173 22166290 -228521564 - L2 LINE L2 -1 3271 3146 207 167 0 0 chr2 22167284 22167320 -228520534 + CT-rich Low_complexity Low_complexity 1 36 0 356 240 21 10 chr2 22167433 22167529 -228520325 - MER110 LTR ERV1 -2 489 393 2070 217 43 33 chr2 22167645 22168129 -228519725 - L1MA9 LINE L1 -38 6274 5781 347 0 23 0 chr2 22168129 22168172 -228519682 + (TCTA)n Simple_repeat Simple_repeat 4 47 0 2070 217 43 33 chr2 22168172 22168345 -228519509 - L1MA9 LINE L1 -531 5781 5611 258 250 0 0 chr2 22169027 22169083 -228518771 + MIR SINE MIR 180 235 -27 180 152 0 0 chr2 22169085 22169118 -228518736 + (TAA)n Simple_repeat Simple_repeat 2 34 0 181 309 25 49 chr2 22169127 22169208 -228518646 - L2 LINE L2 -650 2664 2586 366 148 34 45 chr2 22169361 22169449 -228518405 + MER5A DNA MER1_type 26 112 -77 199 206 294 11 chr2 22169383 22169475 -228518379 - MER5A DNA MER1_type -32 157 40 * 226 173 0 0 chr2 22169732 22169784 -228518070 + L1MC4 LINE L1 6652 6703 -1339 279 0 0 0 chr2 22171988 22172019 -228515835 + (CA)n Simple_repeat Simple_repeat 2 32 0 33 73 0 0 chr2 22172019 22172087 -228515767 + AT_rich Low_complexity Low_complexity 1 68 0 198 0 0 0 chr2 22172093 22172115 -228515739 + (TA)n Simple_repeat Simple_repeat 1 22 0 192 328 40 80 chr2 22172147 22172272 -228515582 - MER5A DNA MER1_type -68 121 2 417 394 20 5 chr2 22172418 22172621 -228515233 + MIR SINE MIR 2 207 -55 24 53 0 0 chr2 22173320 22173358 -228514496 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 22173766 22173789 -228514065 + AT_rich Low_complexity Low_complexity 1 23 0 1932 108 0 0 chr2 22174853 22175104 -228512750 + AluSq SINE Alu 1 251 -62 453 316 88 10 chr2 22175332 22175525 -228512329 + MIR SINE MIR 31 238 -24 193 215 13 13 chr2 22175657 22175736 -228512118 + (TTTA)n Simple_repeat Simple_repeat 4 82 0 283 136 0 0 chr2 22175830 22175874 -228511980 + L2 LINE L2 3269 3312 -1 183 42 0 0 chr2 22176268 22176292 -228511562 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1383 152 67 41 chr2 22176295 22176565 -228511289 - AluSg SINE Alu -33 277 1 31 0 0 0 chr2 22177010 22177041 -228510813 + AT_rich Low_complexity Low_complexity 1 31 0 896 128 156 0 chr2 22177041 22177221 -228510633 - L1MA2 LINE L1 -2 6302 6095 2337 91 0 0 chr2 22177431 22177718 -228510136 + AluSg SINE Alu 1 287 -23 243 0 0 0 chr2 22177719 22177746 -228510108 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 633 338 123 41 chr2 22177769 22177979 -228509875 + L2 LINE L2 2134 2325 -989 2186 136 0 0 chr2 22177979 22178289 -228509565 + AluSx SINE Alu 1 310 -2 633 338 123 41 chr2 22178289 22178768 -228509086 + L2 LINE L2 2325 2880 -434 1063 289 73 24 chr2 22178892 22179526 -228508328 - HAL1 LINE L1 -162 2345 1681 1836 235 21 14 chr2 22179560 22180071 -228507783 - MER90 LTR ERV1 -99 515 1 375 290 115 68 chr2 22180078 22181187 -228506667 - HAL1 LINE L1 -1245 1262 101 201 330 134 50 chr2 22181294 22181396 -228506458 + L3 LINE CR1 238 330 -1247 2202 111 0 26 chr2 22181396 22181703 -228506151 + AluSq SINE Alu 1 299 -14 2182 98 0 29 chr2 22181703 22182009 -228505845 + AluY SINE Alu 1 297 -14 201 330 134 50 chr2 22182009 22182144 -228505710 + L3 LINE CR1 329 496 -1081 351 315 123 19 chr2 22182151 22182313 -228505541 + MIR SINE MIR 12 190 -72 750 161 8 0 chr2 22182489 22182607 -228505247 + 5S rRNA rRNA 1 119 -2 2871 22 0 0 chr2 22183655 22183971 -228503883 - AluYb8 SINE Alu -2 316 1 193 323 0 48 chr2 22186569 22186631 -228501223 - L2 LINE L2 -63 3209 3151 336 376 24 37 chr2 22186668 22186946 -228500908 + L2 LINE L2 2728 3010 -262 513 230 64 29 chr2 22187123 22187578 -228500276 + MLT1H LTR MaLR 20 590 0 449 255 127 45 chr2 22188793 22188857 -228498997 - MLT1H LTR MaLR -1 548 491 1791 166 26 10 chr2 22188857 22189164 -228498690 + AluJb SINE Alu 1 312 0 449 255 127 45 chr2 22189164 22189332 -228498522 - MLT1H LTR MaLR -58 491 320 2078 136 0 16 chr2 22189572 22189880 -228497974 - AluSx SINE Alu 0 312 10 216 345 191 0 chr2 22190094 22190204 -228497650 - MIR SINE MIR -128 134 4 515 228 53 23 chr2 22190279 22190450 -228497404 + MER104 DNA MER2_type 4 179 -1 1960 153 22 30 chr2 22191378 22191745 -228496109 + THE1B LTR MaLR 1 364 0 11651 97 4 11 chr2 22191745 22192254 -228495600 + THE1B-int LTR MaLR 1 512 -1068 2339 116 0 0 chr2 22192254 22192565 -228495289 + AluY SINE Alu 1 311 0 11651 97 4 11 chr2 22192565 22193646 -228494208 + THE1B-int LTR MaLR 512 1580 0 1958 150 19 46 chr2 22193646 22194019 -228493835 + THE1B LTR MaLR 1 363 -1 1251 96 0 0 chr2 22194965 22195131 -228492723 + AluSg/x SINE Alu 142 307 -3 252 303 35 27 chr2 22195144 22195267 -228492587 - MER5A DNA MER1_type -52 137 4 190 359 0 0 chr2 22195367 22195420 -228492434 + L2 LINE L2 3219 3271 -1 273 273 67 53 chr2 22196746 22196896 -228490958 - L2 LINE L2 -124 3189 3038 190 235 0 0 chr2 22197000 22197034 -228490820 - L2 LINE L2 -83 3189 3156 354 351 28 83 chr2 22197384 22197709 -228490145 - L2 LINE L2 0 3272 2966 322 250 54 11 chr2 22198100 22198192 -228489662 - MIR SINE MIR -128 134 39 339 344 31 12 chr2 22199846 22200006 -228487848 + MIR SINE MIR 28 190 -72 226 305 9 48 chr2 22200434 22200539 -228487315 + MIR SINE MIR 103 203 -59 354 353 74 7 chr2 22201304 22201532 -228486322 + MIR SINE MIR 21 262 0 248 0 0 30 chr2 22201537 22201570 -228486284 + (TTA)n Simple_repeat Simple_repeat 1 32 0 459 92 0 0 chr2 22201648 22201713 -228486141 + (CA)n Simple_repeat Simple_repeat 1 65 0 265 255 0 53 chr2 22202032 22202126 -228485728 + LTR33A LTR ERVL 412 500 -23 21 57 0 0 chr2 22202508 22202543 -228485311 + AT_rich Low_complexity Low_complexity 1 35 0 1992 136 3 6 chr2 22205178 22205495 -228482359 + L1PA15 LINE L1 5847 6162 -3 287 298 10 39 chr2 22205711 22205815 -228482039 + MIR SINE MIR 40 140 -122 1940 170 96 19 chr2 22205816 22206234 -228481620 - MER66A LTR ERV1 0 478 29 1765 185 3 16 chr2 22207905 22208219 -228479635 - AluJo SINE Alu -2 310 1 1691 173 83 25 chr2 22208931 22209329 -228478525 + MER66B LTR ERV1 3 423 -63 188 184 20 0 chr2 22210163 22210212 -228477642 + (TA)n Simple_repeat Simple_repeat 1 50 0 1965 150 7 78 chr2 22210852 22211265 -228476589 + MLT1B LTR MaLR 7 390 0 201 195 0 0 chr2 22212886 22212927 -228474927 + (TA)n Simple_repeat Simple_repeat 1 41 0 324 0 0 0 chr2 22214322 22214358 -228473496 + (A)n Simple_repeat Simple_repeat 1 36 0 1896 263 47 76 chr2 22217331 22218434 -228469420 - L1ME3A LINE L1 -5 6165 5119 259 224 48 109 chr2 22218584 22218731 -228469123 - MIR SINE MIR -25 237 100 364 264 8 49 chr2 22219128 22219358 -228468496 + GA-rich Low_complexity Low_complexity 1 220 0 345 284 90 15 chr2 22219358 22219492 -228468362 + MIR SINE MIR 63 206 -56 21 36 0 0 chr2 22222917 22222945 -228464909 + AT_rich Low_complexity Low_complexity 1 28 0 192 260 80 0 chr2 22223166 22223216 -228464638 - L2 LINE L2 -1 3312 3259 6074 119 61 88 chr2 22223882 22225120 -228462734 + Tigger3b DNA MER2_type 28 1231 0 1475 219 16 33 chr2 22225755 22226121 -228461733 - MLT1C LTR MaLR -52 415 56 222 299 11 58 chr2 22226870 22226957 -228460897 + MIR SINE MIR 33 115 -93 188 237 65 86 chr2 22227289 22227382 -228460472 - L2 LINE L2 -9 3304 3214 437 335 66 0 chr2 22228778 22228930 -228458924 - L2 LINE L2 0 3272 3111 226 319 104 42 chr2 22228978 22229238 -228458616 + L2 LINE L2 1807 2082 -1232 1636 122 24 32 chr2 22229359 22229606 -228458248 - AluSc SINE Alu -64 245 1 458 298 13 20 chr2 22231569 22231720 -228456134 - MIR SINE MIR -18 244 95 2283 113 0 13 chr2 22231885 22232196 -228455658 + AluSg SINE Alu 1 307 -3 321 26 0 0 chr2 22232196 22232234 -228455620 + (TA)n Simple_repeat Simple_repeat 2 39 0 419 371 84 23 chr2 22235925 22236364 -228451490 - L2 LINE L2 -338 2976 2511 186 307 51 73 chr2 22236844 22236981 -228450873 - L2 LINE L2 -635 2679 2546 892 186 101 36 chr2 22237787 22237812 -228450042 - MER33 DNA MER1_type -2318 267 245 2110 137 3 0 chr2 22237812 22238112 -228449742 + AluSx SINE Alu 1 301 -11 892 186 101 36 chr2 22238112 22238333 -228449521 - MER33 DNA MER1_type -2340 245 5 527 294 15 0 chr2 22240810 22240946 -228446908 + MIR SINE MIR 1 138 -124 924 326 98 7 chr2 22240952 22241390 -228446464 - LTR33 LTR ERVL -11 510 33 391 278 0 10 chr2 22241399 22241496 -228446358 + MIR SINE MIR 146 241 -21 941 294 37 47 chr2 22243194 22243785 -228444069 + L1ME3 LINE L1 5299 5883 -279 2252 107 7 0 chr2 22244021 22244331 -228443523 - AluSq SINE Alu -1 312 1 206 237 13 0 chr2 22244384 22244460 -228443394 + (TA)n Simple_repeat Simple_repeat 1 77 0 25 0 0 0 chr2 22244480 22244505 -228443349 + AT_rich Low_complexity Low_complexity 1 25 0 1588 295 86 69 chr2 22244697 22246169 -228441685 + L2 LINE L2 1815 3313 0 24 53 0 0 chr2 22246278 22246316 -228441538 + AT_rich Low_complexity Low_complexity 1 38 0 3272 95 12 12 chr2 22247073 22247555 -228440299 - L1PB1 LINE L1 -7 6144 5663 189 0 0 0 chr2 22247790 22247811 -228440043 + (TCCCC)n Simple_repeat Simple_repeat 1 21 0 256 337 84 32 chr2 22247829 22248019 -228439835 + L2 LINE L2 3001 3200 -113 39 0 0 0 chr2 22250008 22250047 -228437807 + AT_rich Low_complexity Low_complexity 1 39 0 362 329 57 35 chr2 22250052 22250280 -228437574 + L1ME LINE L1 4631 4863 -1283 8982 215 24 8 chr2 22251055 22253182 -228434672 + L1 LINE L1 3143 5305 -841 31 0 0 0 chr2 22254514 22254545 -228433309 + AT_rich Low_complexity Low_complexity 1 31 0 229 319 70 57 chr2 22254764 22254921 -228432933 - L2 LINE L2 -244 3028 2870 22 0 0 0 chr2 22256649 22256671 -228431183 + AT_rich Low_complexity Low_complexity 1 22 0 278 208 69 0 chr2 22257168 22257240 -228430614 + MER103 DNA DNA 2 78 -88 1822 179 7 10 chr2 22257334 22257635 -228430219 + AluJb SINE Alu 2 301 -11 321 258 21 108 chr2 22257754 22257848 -228430006 - MIR SINE MIR -7 255 185 2232 94 3 16 chr2 22257848 22258155 -228429699 - AluSx SINE Alu -8 304 2 321 258 21 108 chr2 22258155 22258254 -228429600 - MIR SINE MIR -77 185 79 331 324 15 15 chr2 22258448 22258584 -228429270 + HAL1 LINE L1 1642 1777 -730 221 321 12 0 chr2 22261109 22261190 -228426664 + GA-rich Low_complexity Low_complexity 2 83 0 22 0 0 0 chr2 22261371 22261393 -228426461 + AT_rich Low_complexity Low_complexity 1 22 0 533 259 71 57 chr2 22262643 22263085 -228424769 + L1ME LINE L1 5316 5776 -345 251 350 82 0 chr2 22263533 22263630 -228424224 + MIR3 SINE MIR 95 199 -9 406 279 23 0 chr2 22263968 22264097 -228423757 + MER94 DNA DNA 3 134 0 381 211 179 0 chr2 22264462 22264557 -228423297 + MER81 DNA DNA 3 114 0 1890 164 26 26 chr2 22264666 22265056 -228422798 + MLT1B LTR MaLR 1 390 0 286 292 0 0 chr2 22266168 22266233 -228421621 + L2 LINE L2 3208 3272 0 641 332 122 11 chr2 22267219 22267589 -228420265 - MLT1J LTR MaLR -1 510 100 285 285 73 3 chr2 22267944 22268062 -228419792 + MIR SINE MIR 30 154 -63 330 275 101 18 chr2 22268077 22268186 -228419668 - L2 LINE L2 0 3272 3155 1936 168 10 23 chr2 22268594 22268897 -228418957 + AluJb SINE Alu 1 299 -13 4092 152 11 45 chr2 22268897 22269746 -228418108 + L1MA4 LINE L1 5481 6300 0 22 0 0 0 chr2 22271279 22271301 -228416553 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 22273370 22273398 -228414456 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 22273521 22273552 -228414302 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 22273873 22273897 -228413957 + AT_rich Low_complexity Low_complexity 1 24 0 254 150 0 17 chr2 22274192 22274252 -228413602 + (TG)n Simple_repeat Simple_repeat 2 60 0 844 293 45 45 chr2 22275174 22275532 -228412322 - L2 LINE L2 0 3313 2956 2068 129 7 26 chr2 22275606 22275909 -228411945 + AluSg SINE Alu 1 297 -13 331 274 24 0 chr2 22276476 22276560 -228411294 + L2 LINE L2 1225 1310 -2004 468 271 121 10 chr2 22276575 22276782 -228411072 - MLT1G LTR MaLR -358 232 3 2805 200 46 28 chr2 22276844 22276884 -228410970 + MER67B LTR ERV1 1 39 -622 2316 126 21 19 chr2 22276884 22277256 -228410598 + THE1C LTR MaLR 3 375 0 7389 157 57 38 chr2 22277256 22278801 -228409053 + THE1C-int LTR MaLR 5 1580 0 2257 157 5 11 chr2 22278801 22279178 -228408676 + THE1C LTR MaLR 1 375 0 2805 200 46 28 chr2 22279178 22279784 -228408070 + MER67B LTR ERV1 38 661 0 259 264 60 104 chr2 22279788 22279989 -228407865 - MLT1G-int LTR MaLR -69 1302 1111 1393 214 36 36 chr2 22281358 22281723 -228406131 - MLT1A1 LTR MaLR 0 365 1 951 292 71 21 chr2 22281725 22282202 -228405652 - MLT1G LTR MaLR -93 497 1 207 146 0 0 chr2 22282265 22282306 -228405548 + (CA)n Simple_repeat Simple_repeat 1 41 0 782 246 39 58 chr2 22282588 22282998 -228404856 - L1ME1 LINE L1 -5 6161 5760 2251 243 58 5 chr2 22282999 22283563 -228404291 + MLT1A1-int LTR MaLR 1137 1730 -5 1628 210 40 11 chr2 22283574 22283926 -228403928 + MLT1A1 LTR MaLR 1 362 -3 1009 213 12 12 chr2 22283933 22284177 -228403677 - L1ME1 LINE L1 -409 5757 5514 2067 93 3 93 chr2 22284597 22284929 -228402925 - AluSp SINE Alu -11 302 1 363 330 98 17 chr2 22285008 22285244 -228402610 - L2 LINE L2 -79 3234 2980 286 318 81 55 chr2 22285362 22285598 -228402256 - L2 LINE L2 -438 2876 2635 22096 156 23 9 chr2 22285607 22285815 -228402039 + L1PA10 LINE L1 1028 1232 -5251 216 0 0 0 chr2 22285815 22285839 -228402015 + (CAA)n Simple_repeat Simple_repeat 1 24 0 22096 156 23 9 chr2 22285839 22290969 -228396885 + L1PA10 LINE L1 1232 6483 0 479 349 24 31 chr2 22291086 22291341 -228396513 - L2 LINE L2 -757 2557 2305 1492 106 8 16 chr2 22291350 22291605 -228396249 + L1MA3 LINE L1 6017 6269 -36 23 0 0 0 chr2 22291605 22291628 -228396226 + AT_rich Low_complexity Low_complexity 1 23 0 621 279 129 59 chr2 22291662 22292304 -228395550 - L2 LINE L2 -1056 2258 1572 207 69 0 0 chr2 22292420 22292449 -228395405 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 2156 93 17 3 chr2 22292689 22292980 -228394874 + AluSg SINE Alu 8 302 -8 27 0 0 0 chr2 22293013 22293040 -228394814 + AT_rich Low_complexity Low_complexity 1 27 0 317 282 0 0 chr2 22294531 22294616 -228393238 + (ATG)n Simple_repeat Simple_repeat 1 85 0 207 69 0 0 chr2 22295232 22295261 -228392593 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 1210 235 77 37 chr2 22298318 22298697 -228389157 - MSTD LTR MaLR 0 396 3 183 353 24 12 chr2 22299952 22300037 -228387817 + L3 LINE CR1 1371 1456 -121 204 316 61 20 chr2 22300137 22300235 -228387619 - MIR SINE MIR -155 107 6 196 353 102 21 chr2 22301667 22301799 -228386055 - MIR SINE MIR -68 140 6 184 255 20 0 chr2 22302015 22302066 -228385788 - L2 LINE L2 -83 3189 3138 216 287 42 91 chr2 22303707 22303795 -228384059 + L2 LINE L2 2600 2680 -634 1180 180 37 26 chr2 22303795 22304067 -228383787 - ORSL DNA AcHobo 0 275 1 216 287 42 91 chr2 22304067 22304121 -228383733 + L2 LINE L2 2680 2735 -579 250 377 35 10 chr2 22304853 22305052 -228382802 + MIR3 SINE MIR 2 205 -3 337 344 54 32 chr2 22306029 22306215 -228381639 - MIR SINE MIR -10 252 63 1923 147 0 38 chr2 22308227 22308541 -228379313 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr2 22309474 22309495 -228378359 + AT_rich Low_complexity Low_complexity 1 21 0 182 61 0 30 chr2 22310859 22310892 -228376962 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 554 106 0 0 chr2 22310893 22310978 -228376876 - L1PA13 LINE L1 -30 6133 6049 644 268 77 30 chr2 22311496 22311932 -228375922 - LTR33 LTR ERVL -5 516 25 308 338 26 19 chr2 22312568 22312722 -228375132 - MIR SINE MIR -5 257 103 277 217 43 6 chr2 22312850 22313011 -228374843 + (CATATA)n Simple_repeat Simple_repeat 2 168 0 690 295 87 62 chr2 22314026 22314508 -228373346 - MLT1G1 LTR MaLR 0 595 102 1836 96 96 0 chr2 22317571 22317842 -228370012 + AluSg SINE Alu 1 297 -13 248 311 39 29 chr2 22317950 22318053 -228369801 + MIR3 SINE MIR 60 163 -45 1137 273 72 45 chr2 22318160 22318867 -228368987 - L2 LINE L2 -96 3217 2490 318 275 100 0 chr2 22320459 22320579 -228367275 - L2 LINE L2 -1362 1952 1821 243 0 0 0 chr2 22320876 22320903 -228366951 + (TG)n Simple_repeat Simple_repeat 1 27 0 610 217 37 25 chr2 22321025 22321186 -228366668 - MIR SINE MIR -56 206 44 183 100 0 0 chr2 22321539 22321569 -228366285 + (GGAAA)n Simple_repeat Simple_repeat 3 32 0 194 290 41 69 chr2 22322034 22322179 -228365675 - MIR SINE MIR -40 222 82 181 279 87 39 chr2 22322401 22322505 -228365349 - L3 LINE CR1 -90 1487 1379 183 314 0 0 chr2 22322948 22322999 -228364855 - L2 LINE L2 -16 3256 3206 211 250 18 18 chr2 22323455 22323511 -228364343 + L2 LINE L2 3209 3264 -49 216 97 0 0 chr2 22323521 22323552 -228364302 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 419 206 7 78 chr2 22324388 22324529 -228363325 + L1ME3 LINE L1 5832 5962 -200 198 342 237 0 chr2 22324777 22324891 -228362963 - MIR3 SINE MIR -49 159 19 284 291 120 0 chr2 22325575 22325692 -228362162 + MIR SINE MIR 96 226 -36 304 302 75 28 chr2 22325915 22326021 -228361833 - L3 LINE CR1 -60 1517 1407 22 56 0 0 chr2 22326612 22326648 -228361206 + AT_rich Low_complexity Low_complexity 1 36 0 2288 105 0 3 chr2 22326840 22327146 -228360708 + AluSg SINE Alu 1 305 -5 349 296 116 37 chr2 22327744 22327933 -228359921 - MIR SINE MIR -1 261 58 2152 118 3 7 chr2 22327940 22328244 -228359610 + AluSx SINE Alu 3 305 -7 2219 110 3 0 chr2 22328580 22328879 -228358975 + AluSx SINE Alu 1 300 -12 341 286 130 7 chr2 22328983 22329089 -228358765 + MIR SINE MIR 81 213 -49 225 0 0 0 chr2 22329089 22329114 -228358740 + (TA)n Simple_repeat Simple_repeat 1 25 0 341 286 130 7 chr2 22329114 22329161 -228358693 + MIR SINE MIR 213 253 -9 455 250 22 15 chr2 22330088 22330224 -228357630 - Charlie2a DNA MER1_type 0 2862 2726 551 189 31 66 chr2 22330243 22330439 -228357415 - Charlie2a DNA MER1_type -1202 1660 1472 733 288 66 28 chr2 22330605 22330893 -228356961 - Charlie2a DNA MER1_type -2477 305 7 258 239 34 111 chr2 22330976 22331093 -228356761 - MIR3 SINE MIR -7 201 94 2460 53 3 3 chr2 22331437 22331739 -228356115 - AluY SINE Alu -9 302 1 25 0 0 0 chr2 22335942 22335967 -228351887 + AT_rich Low_complexity Low_complexity 1 25 0 306 0 0 0 chr2 22335973 22336007 -228351847 + (CA)n Simple_repeat Simple_repeat 2 35 0 344 298 80 20 chr2 22336182 22336333 -228351521 + MER5A DNA MER1_type 2 161 -28 366 241 148 92 chr2 22336652 22337174 -228350680 - MER34C LTR ERV1 0 585 35 202 326 124 8 chr2 22338101 22338230 -228349624 - L2 LINE L2 -2 3270 3127 1020 196 99 48 chr2 22338343 22338717 -228349137 + MLT1C LTR MaLR 6 390 0 1143 49 0 0 chr2 22339166 22339308 -228348546 - L1PA8 LINE L1 -419 5753 5612 3243 71 7 0 chr2 22339318 22339740 -228348114 + L1PA8 LINE L1 5746 6170 -2 780 284 90 29 chr2 22340506 22341407 -228346447 + L1MEc LINE L1 705 1461 -4754 * 929 274 119 35 chr2 22341390 22341744 -228346110 + L1MEc LINE L1 2157 2480 -3735 1690 204 132 34 chr2 22341744 22341856 -228345998 + MLT2B1 LTR ERVL 4 104 -416 2560 43 0 3 chr2 22341856 22342160 -228345694 + AluY SINE Alu 1 303 -8 1690 204 132 34 chr2 22342160 22342463 -228345391 + MLT2B1 LTR ERVL 104 376 -144 189 107 0 0 chr2 22342463 22342491 -228345363 + (CATATA)n Simple_repeat Simple_repeat 3 30 0 1690 204 132 34 chr2 22342491 22342504 -228345350 + MLT2B1 LTR ERVL 376 386 -134 219 36 0 0 chr2 22342504 22342532 -228345322 + (TG)n Simple_repeat Simple_repeat 2 29 0 1690 204 132 34 chr2 22342532 22342572 -228345282 + MLT2B1 LTR ERVL 386 520 0 929 274 119 35 chr2 22342572 22342924 -228344930 + L1MEc LINE L1 2480 2885 -3330 1216 198 118 19 chr2 22342924 22343237 -228344617 - MER2 DNA MER2_type 0 344 1 929 274 119 35 chr2 22343237 22343251 -228344603 + L1MEc LINE L1 2885 2896 -3319 956 254 19 29 chr2 22343277 22343569 -228344285 + L1MEc LINE L1 3402 3691 -2524 2269 137 64 17 chr2 22343569 22343978 -228343876 + MSTA LTR MaLR 1 428 0 956 254 19 29 chr2 22343978 22344059 -228343795 + L1MEc LINE L1 3691 3771 -2444 256 210 20 40 chr2 22344092 22344192 -228343662 + L1MC5 LINE L1 7612 7709 -252 238 237 53 0 chr2 22344247 22344323 -228343531 - MER116 DNA Mariner 0 80 1 183 80 0 0 chr2 22345072 22345097 -228342757 + (CA)n Simple_repeat Simple_repeat 2 26 0 308 217 33 50 chr2 22345228 22345348 -228342506 - LTR41 LTR ERVL -6 767 650 685 237 47 51 chr2 22345685 22345942 -228341912 - LTR41 LTR ERVL -501 272 17 686 281 76 5 chr2 22346108 22346318 -228341536 + MIR SINE MIR 28 252 -10 274 310 100 0 chr2 22347282 22347382 -228340472 + L2 LINE L2 3163 3272 0 306 50 0 0 chr2 22348229 22348269 -228339585 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 326 180 0 0 chr2 22348275 22348325 -228339529 - 5S rRNA rRNA -70 51 2 22 0 0 0 chr2 22348660 22348682 -228339172 + AT_rich Low_complexity Low_complexity 1 22 0 301 300 65 25 chr2 22348689 22348889 -228338965 + L1M4 LINE L1 2225 2432 -3714 248 304 72 0 chr2 22349197 22349335 -228338519 - MER104 DNA Tc2 -31 149 2 27 0 0 0 chr2 22349392 22349419 -228338435 + AT_rich Low_complexity Low_complexity 1 27 0 360 311 15 15 chr2 22349555 22349690 -228338164 + MLT1I LTR MaLR 80 214 -195 6188 145 26 10 chr2 22349822 22350813 -228337041 + THE1C-int LTR MaLR 574 1580 0 2413 113 21 37 chr2 22350813 22351151 -228336703 + THE1C LTR MaLR 1 334 -41 2255 115 3 0 chr2 22351151 22351456 -228336398 - AluSx SINE Alu -1 311 6 2413 113 21 37 chr2 22351456 22351498 -228336356 + THE1C LTR MaLR 334 375 0 10580 136 31 89 chr2 22351498 22352351 -228335503 + Tigger1 DNA MER2_type 282 1182 -1236 1944 119 3 77 chr2 22352351 22352687 -228335167 + AluSp SINE Alu 1 311 -2 10580 136 31 89 chr2 22352687 22353301 -228334553 + Tigger1 DNA MER2_type 1182 1764 -654 870 187 6 29 chr2 22353301 22353472 -228334382 + FRAM SINE Alu 1 163 -13 10580 136 31 89 chr2 22353472 22354022 -228333832 + Tigger1 DNA MER2_type 1764 2344 -74 1575 230 110 17 chr2 22354052 22354643 -228333211 + L1MC3 LINE L1 4744 5389 -757 258 250 0 0 chr2 22354640 22354700 -228333154 - L1 LINE L1 -1179 4967 4908 * 3636 197 54 5 chr2 22354727 22355450 -228332404 - L1 LINE L1 -1225 4921 4150 288 0 0 0 chr2 22355450 22355482 -228332372 + (TC)n Simple_repeat Simple_repeat 2 33 0 3636 197 54 5 chr2 22355482 22355587 -228332267 - L1 LINE L1 -1996 4150 4052 * 3702 173 41 35 chr2 22355585 22356721 -228331133 + L1MA9 LINE L1 4941 6081 -231 403 194 58 10 chr2 22356723 22356826 -228331028 + L1MA9 LINE L1 6180 6287 -25 45 19 0 0 chr2 22356829 22356881 -228330973 + AT_rich Low_complexity Low_complexity 1 52 0 7281 201 41 25 chr2 22356908 22357246 -228330608 + L1MC3 LINE L1 5386 5717 -2068 2590 39 3 0 chr2 22357246 22357587 -228330267 + AluY SINE Alu 1 342 0 7281 201 41 25 chr2 22357587 22359019 -228328835 + L1MC3 LINE L1 5717 7186 -599 630 302 108 0 chr2 22359021 22359289 -228328565 - MER110 LTR ERV1 -7 484 188 521 315 80 28 chr2 22359578 22359940 -228327914 + L1ME LINE L1 5335 5715 -455 21 0 0 0 chr2 22360025 22360046 -228327808 + AT_rich Low_complexity Low_complexity 1 21 0 2235 129 44 46 chr2 22360046 22360481 -228327373 + Tigger2a DNA MER2_type 1 434 0 2456 162 9 12 chr2 22360730 22361157 -228326697 + MSTB LTR MaLR 1 426 0 299 273 36 9 chr2 22361322 22361432 -228326422 - L1M4 LINE L1 -1201 4945 4833 1355 264 47 28 chr2 22361482 22361975 -228325879 - L1M4 LINE L1 -1319 4827 4326 647 276 0 54 chr2 22361975 22362160 -228325694 + MER8 DNA MER2_type 1 175 -64 408 148 0 111 chr2 22362195 22362276 -228325578 - Tigger2a DNA MER2_type -361 73 2 2534 232 26 19 chr2 22362277 22363001 -228324853 - L1M4 LINE L1 -1823 4323 3595 22 0 0 0 chr2 22363122 22363144 -228324710 + AT_rich Low_complexity Low_complexity 1 22 0 2473 67 0 13 chr2 22363733 22364048 -228323806 - AluY SINE Alu 0 311 1 472 328 123 0 chr2 22366509 22366713 -228321141 - MIR SINE MIR -10 252 24 501 348 26 31 chr2 22367043 22367270 -228320584 - MIR SINE MIR -14 248 23 429 293 75 11 chr2 22367672 22367860 -228319994 - HAL1 LINE L1 -1933 574 375 230 143 41 0 chr2 22368280 22368329 -228319525 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 192 356 43 26 chr2 22368982 22369076 -228318778 + MIR SINE MIR 30 128 -80 4406 101 16 0 chr2 22369076 22369701 -228318153 + MER41B LTR ERV1 1 635 0 192 356 43 26 chr2 22369701 22369721 -228318133 + MIR SINE MIR 128 146 -62 22 0 0 0 chr2 22370272 22370294 -228317560 + AT_rich Low_complexity Low_complexity 1 22 0 238 48 0 48 chr2 22370307 22370349 -228317505 + (TA)n Simple_repeat Simple_repeat 1 40 0 475 284 161 14 chr2 22370617 22370835 -228317019 + MIR SINE MIR 13 262 0 505 278 97 34 chr2 22371163 22371339 -228316515 + MIR SINE MIR 65 251 -11 282 316 33 40 chr2 22371369 22371521 -228316333 + L2 LINE L2 3146 3296 -17 1309 276 72 35 chr2 22371870 22372765 -228315089 + L1MEc LINE L1 2159 3037 -3178 383 332 91 18 chr2 22372907 22373141 -228314713 + L1MEc LINE L1 3041 3292 -2923 794 222 4 50 chr2 22373154 22373399 -228314455 + L1ME2 LINE L1 4467 4700 -1446 422 232 90 13 chr2 22373410 22373565 -228314289 + L1ME2 LINE L1 5281 5447 -715 366 236 79 0 chr2 22373589 22373716 -228314138 + L1ME2 LINE L1 5751 5887 -277 398 278 97 42 chr2 22373719 22373935 -228313919 + L1ME2 LINE L1 5936 6163 -1 298 328 56 31 chr2 22373928 22373949 -228313905 + L1MEc LINE L1 3398 3417 -2798 * 3293 130 43 26 chr2 22373949 22374532 -228313322 + LTR49 LTR ERV1 3 595 0 298 328 56 31 chr2 22374532 22374867 -228312987 + L1MEc LINE L1 3417 3763 -2452 814 268 98 40 chr2 22375043 22375662 -228312192 - L1M4 LINE L1 -1809 4337 3683 315 252 50 0 chr2 22376274 22376393 -228311461 - L1ME3A LINE L1 -4 6166 6042 2127 122 7 0 chr2 22376394 22376688 -228311166 + AluSx SINE Alu 1 296 -16 344 284 0 11 chr2 22376691 22376786 -228311068 - L1MC4 LINE L1 -1339 6703 6610 355 300 23 0 chr2 22376787 22376917 -228310937 - L1ME3A LINE L1 -123 6047 5915 618 266 86 5 chr2 22376919 22377141 -228310713 - L1ME3A LINE L1 -285 5885 5646 393 86 43 0 chr2 22377141 22377211 -228310643 - MER31-int LTR ERV1 -1985 2951 2879 2312 61 16 13 chr2 22377235 22377545 -228310309 - AluY SINE Alu 0 311 1 1096 171 6 0 chr2 22377548 22377724 -228310130 - AluJb SINE Alu -16 296 120 1231 94 42 5 chr2 22377744 22377936 -228309918 - L1PA3 LINE L1 0 6155 5957 879 263 67 24 chr2 22377936 22378224 -228309630 - L1ME3A LINE L1 -518 5652 5343 297 0 0 0 chr2 22378224 22378257 -228309597 + (TG)n Simple_repeat Simple_repeat 2 34 0 879 263 67 24 chr2 22378257 22378344 -228309510 - L1ME3A LINE L1 -827 5343 5261 308 230 50 80 chr2 22379681 22379781 -228308073 - MER91C DNA MER1_type -11 129 33 249 33 0 0 chr2 22380537 22380567 -228307287 + (TG)n Simple_repeat Simple_repeat 1 30 0 256 219 0 78 chr2 22380745 22380809 -228307045 + MER115 DNA AcHobo 1 59 -634 2095 101 3 21 chr2 22380950 22381270 -228306584 - AluSx SINE Alu 0 315 1 1327 179 43 33 chr2 22381704 22382005 -228305849 + MLT2C1 LTR ERVL 93 396 -1 357 276 30 30 chr2 22382051 22382185 -228305669 - MLT1K LTR MaLR -338 250 117 270 321 46 55 chr2 22383748 22383857 -228303997 - MIR SINE MIR -58 150 43 326 339 130 28 chr2 22384303 22384480 -228303374 + MER91A DNA MER1_type 2 196 0 1056 208 55 104 chr2 22385189 22385523 -228302331 + MLT1A1 LTR MaLR 1 350 -15 450 0 0 0 chr2 22385523 22385573 -228302281 + (TA)n Simple_repeat Simple_repeat 1 50 0 279 0 0 0 chr2 22385572 22385603 -228302251 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 1056 208 55 104 chr2 22385573 22385652 -228302202 + MLT1A1 LTR MaLR 350 365 0 644 271 124 19 chr2 22386229 22386439 -228301415 - MIR SINE MIR -28 234 3 643 317 0 0 chr2 22387125 22387289 -228300565 - MIR SINE MIR -98 164 1 1129 171 9 46 chr2 22388033 22388249 -228299605 + AluJb SINE Alu 86 293 -19 226 147 0 0 chr2 22389027 22389061 -228298793 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 813 190 0 0 chr2 22389061 22389240 -228298614 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 204 345 84 49 chr2 22389332 22389474 -228298380 - L2 LINE L2 -5 3267 3121 245 274 48 36 chr2 22389842 22389926 -228297928 + MER96 DNA MER1_type? 91 175 0 2256 171 70 42 chr2 22390258 22390786 -228297068 - MER74A LTR ERVL -15 543 1 252 0 0 0 chr2 22391772 22391800 -228296054 + (A)n Simple_repeat Simple_repeat 1 28 0 1688 238 40 12 chr2 22391802 22392223 -228295631 + MLT1C LTR MaLR 35 467 0 1671 194 156 34 chr2 22393041 22393535 -228294319 + L1ME2 LINE L1 5611 6164 0 2165 99 3 0 chr2 22393546 22393917 -228293937 + AluSp SINE Alu 2 373 0 778 255 80 34 chr2 22394771 22395010 -228292844 + MIR SINE MIR 13 262 0 8585 196 33 134 chr2 22398454 22400821 -228287033 + L1M2 LINE L1 9 2056 -4793 1718 10 0 0 chr2 22400821 22401015 -228286839 - L1PA3 LINE L1 -5 6150 5957 8585 196 33 134 chr2 22401015 22401424 -228286430 + L1M2 LINE L1 2056 2505 -4344 2442 42 0 7 chr2 22401412 22401719 -228286135 + L1P LINE L1 2768 3072 -3074 * 563 180 0 18 chr2 22401708 22401819 -228286035 + L1M2 LINE L1 2494 2602 -4247 * 2200 155 5 8 chr2 22401822 22402196 -228285658 - THE1C LTR MaLR 0 375 3 9532 123 35 40 chr2 22402198 22403786 -228284068 - THE1C-int LTR MaLR 0 1580 1 2292 128 11 14 chr2 22403788 22404147 -228283707 - THE1C LTR MaLR -2 373 16 2033 209 33 31 chr2 22404149 22404910 -228282944 + L1M2 LINE L1 2601 3362 -3486 12129 237 22 9 chr2 22404930 22409940 -228277914 - L1PA16 LINE L1 -40 6183 899 4797 141 19 20 chr2 22409941 22410793 -228277061 + L1MA4A LINE L1 5443 6293 -10 28 29 0 0 chr2 22411246 22411281 -228276573 + AT_rich Low_complexity Low_complexity 1 35 0 1439 214 0 0 chr2 22411294 22411575 -228276279 - AluJb SINE Alu -31 281 1 3641 241 49 39 chr2 22411658 22412825 -228275029 + L1MCb LINE L1 1 1178 -4867 411 302 62 36 chr2 22412816 22413041 -228274813 + HAL1 LINE L1 1373 1603 -904 * 450 272 77 57 chr2 22413128 22413431 -228274423 + L1MCb LINE L1 3150 3445 -3119 1645 150 98 7 chr2 22413431 22413717 -228274137 + AluSx SINE Alu 1 312 0 450 272 77 57 chr2 22413717 22414167 -228273687 + L1MCb LINE L1 3445 3918 -2646 719 305 89 38 chr2 22414192 22414641 -228273213 - L2 LINE L2 -18 3295 2824 372 312 77 16 chr2 22414685 22414996 -228272858 + L1MCb LINE L1 3997 4326 -2238 750 366 65 11 chr2 22415117 22415486 -228272368 + LTR16A LTR ERVL 55 443 -7 846 310 113 33 chr2 22415509 22415779 -228272075 + ERVL LTR ERVL 4479 4726 -1038 2436 125 6 0 chr2 22415779 22416132 -228271722 - THE1A LTR MaLR 0 355 1 11037 102 5 29 chr2 22416132 22417751 -228270103 - THE1A-int LTR MaLR 0 1580 1 2486 105 8 0 chr2 22417751 22418103 -228269751 - THE1A LTR MaLR 0 355 1 846 310 113 33 chr2 22418103 22418379 -228269475 + ERVL LTR ERVL 4725 5071 -693 352 331 102 39 chr2 22418391 22418696 -228269158 + MLT1I LTR MaLR 1 324 -85 298 162 27 0 chr2 22418703 22418777 -228269077 + (TA)n Simple_repeat Simple_repeat 2 77 0 6540 183 31 41 chr2 22419073 22421458 -228266396 + L1MA7 LINE L1 4355 6706 -3 5601 148 18 11 chr2 22421893 22422760 -228265094 - L1PA16 LINE L1 -3 6163 5281 198 103 0 0 chr2 22422760 22422789 -228265065 + (CTTG)n Simple_repeat Simple_repeat 3 31 0 5601 148 18 11 chr2 22422789 22423156 -228264698 - L1PA16 LINE L1 -885 5281 4918 638 202 154 0 chr2 22423402 22423509 -228264345 - L1MA9 LINE L1 -39 6273 6184 273 57 0 0 chr2 22423509 22423544 -228264310 + (TG)n Simple_repeat Simple_repeat 2 36 0 638 202 154 0 chr2 22423544 22423624 -228264230 - L1MA9 LINE L1 -128 6184 6057 2843 13 0 0 chr2 22424597 22424907 -228262947 + AluYb8 SINE Alu 1 310 -8 25 0 0 0 chr2 22425573 22425598 -228262256 + AT_rich Low_complexity Low_complexity 1 25 0 28 61 0 0 chr2 22425707 22425756 -228262098 + AT_rich Low_complexity Low_complexity 1 49 0 304 271 36 6 chr2 22425756 22425922 -228261932 + (TA)n Simple_repeat Simple_repeat 1 171 0 683 274 152 25 chr2 22426147 22426508 -228261346 - MLT1J LTR MaLR -35 476 70 4009 78 0 0 chr2 22426520 22427054 -228260800 - L1P LINE L1 -3087 3059 2525 14379 82 4 35 chr2 22427054 22429835 -228258019 + L1PA7 LINE L1 3396 6154 0 4410 167 12 65 chr2 22431800 22432866 -228254988 - L1MB1 LINE L1 -1 6167 5146 1244 225 78 15 chr2 22432865 22433198 -228254656 + L1MB1 LINE L1 4795 5148 -998 * 835 368 56 23 chr2 22433254 22433986 -228253868 + L2 LINE L2 1711 2466 -848 373 266 78 69 chr2 22433986 22434306 -228253548 - MER97c DNA MER1_type? 0 1090 768 22 56 0 0 chr2 22434432 22434468 -228253386 + AT_rich Low_complexity Low_complexity 1 36 0 1279 236 36 25 chr2 22434633 22434993 -228252861 - MER97a DNA MER1_type? -289 605 242 196 118 20 20 chr2 22435031 22435082 -228252772 + (TA)n Simple_repeat Simple_repeat 1 51 0 358 35 0 35 chr2 22435132 22435190 -228252664 + (TA)n Simple_repeat Simple_repeat 1 56 0 1893 105 61 107 chr2 22435197 22435362 -228252492 - THE1C LTR MaLR 0 375 204 234 0 0 0 chr2 22435362 22435388 -228252466 + (GA)n Simple_repeat Simple_repeat 1 26 0 1893 105 61 107 chr2 22435388 22435614 -228252240 - THE1C LTR MaLR -171 204 2 218 87 43 22 chr2 22435636 22435682 -228252172 + (TA)n Simple_repeat Simple_repeat 1 47 0 435 193 12 0 chr2 22435710 22435793 -228252061 - MER97b DNA MER1_type? -817 236 153 332 250 23 0 chr2 22435793 22435881 -228251973 + L1MD2 LINE L1 6048 6137 -222 266 246 0 0 chr2 22435885 22435950 -228251904 + (TA)n Simple_repeat Simple_repeat 1 65 0 2113 117 0 0 chr2 22436001 22436334 -228251520 - AluSg SINE Alu 0 333 1 467 225 70 8 chr2 22436354 22436483 -228251371 - MER97c DNA MER1_type? -945 145 9 425 346 61 24 chr2 22436570 22436899 -228250955 + L2 LINE L2 2543 2883 -431 1276 262 47 13 chr2 22437326 22437749 -228250105 - MERVL LTR ERVL -3264 2221 1742 383 328 15 51 chr2 22437763 22437958 -228249896 - MERVL LTR ERVL -3422 1574 1387 500 379 61 0 chr2 22438030 22438310 -228249544 - MERVL LTR ERVL -3711 1285 989 901 224 22 0 chr2 22438311 22438494 -228249360 - MER5A DNA MER1_type -2 187 1 489 353 34 11 chr2 22438510 22438776 -228249078 - MERVL LTR ERVL -4016 980 709 294 350 150 10 chr2 22439067 22439361 -228248493 - L2 LINE L2 -805 2509 2175 954 124 0 0 chr2 22439362 22439515 -228248339 + (TAGA)n Simple_repeat Simple_repeat 3 155 0 21 89 0 0 chr2 22439733 22439789 -228248065 + AT_rich Low_complexity Low_complexity 1 56 0 21 71 0 0 chr2 22442329 22442371 -228245483 + AT_rich Low_complexity Low_complexity 1 42 0 327 264 23 23 chr2 22442516 22442603 -228245251 + MLT2E LTR ERVL 34 120 -508 2172 84 54 3 chr2 22442613 22442909 -228244945 + AluSq SINE Alu 1 311 -2 318 350 20 0 chr2 22442909 22443009 -228244845 + MER81 DNA DNA 3 104 -10 986 287 59 72 chr2 22443010 22443539 -228244315 + MLT2E LTR ERVL 107 628 0 198 296 19 0 chr2 22443875 22443929 -228243925 + L2 LINE L2 3198 3252 -20 182 173 96 58 chr2 22445022 22445074 -228242780 - MIR3 SINE MIR -38 170 117 367 333 8 15 chr2 22445811 22445943 -228241911 + MIR3 SINE MIR 38 168 -40 385 305 136 86 chr2 22446034 22446476 -228241378 - L2 LINE L2 0 3272 2809 2096 291 61 9 chr2 22447168 22447853 -228240001 - L3 LINE CR1 -457 1120 400 373 296 43 17 chr2 22447981 22448096 -228239758 + L2 LINE L2 3196 3313 0 1166 231 0 4 chr2 22448202 22448427 -228239427 + MER58A DNA MER1_type 1 224 0 204 363 134 25 chr2 22448652 22448809 -228239045 - MIR SINE MIR -5 257 84 350 409 50 0 chr2 22452795 22452954 -228234900 + L2 LINE L2 3106 3272 0 566 304 27 11 chr2 22453286 22453470 -228234384 - MIR SINE MIR -13 249 63 1477 215 0 13 chr2 22453473 22453780 -228234074 - AluJo SINE Alu -9 303 1 230 324 14 0 chr2 22454174 22454245 -228233609 - L2 LINE L2 -1 3271 3200 1979 221 54 50 chr2 22457670 22457781 -228230073 - MER68 LTR ERV1 0 562 453 2298 125 3 55 chr2 22457781 22458165 -228229689 - THE1B LTR MaLR 0 364 1 1979 221 54 50 chr2 22458165 22458613 -228229241 - MER68 LTR ERV1 -109 453 1 318 302 101 0 chr2 22460442 22460581 -228227273 + MIR SINE MIR 18 170 -92 283 258 15 0 chr2 22461318 22461384 -228226470 - L3 LINE CR1 -2 1575 1509 1611 173 3 13 chr2 22461525 22461831 -228226023 - L1PB4 LINE L1 -268 5888 5586 767 264 0 0 chr2 22461830 22462004 -228225850 + L1PA16 LINE L1 5942 6115 -51 * 451 357 58 49 chr2 22462123 22462550 -228225304 + L2 LINE L2 2596 3032 -281 881 64 80 0 chr2 22462550 22462675 -228225179 - MER85 DNA T2_type -2 137 3 451 357 58 49 chr2 22462675 22462958 -228224896 + L2 LINE L2 3032 3311 -2 217 214 0 0 chr2 22463409 22463451 -228224403 + (TG)n Simple_repeat Simple_repeat 1 42 0 2292 105 66 0 chr2 22463459 22463791 -228224063 - THE1B LTR MaLR 0 364 11 182 333 0 0 chr2 22463814 22463862 -228223992 - L3 LINE CR1 -595 982 935 1009 268 198 22 chr2 22463929 22464388 -228223466 + MLT1F LTR MaLR 1 540 -2 21 0 0 0 chr2 22464512 22464533 -228223321 + AT_rich Low_complexity Low_complexity 1 21 0 272 343 117 54 chr2 22464560 22464982 -228222872 - L3 LINE CR1 -872 705 240 6962 62 2 1 chr2 22464982 22466055 -228221799 + L1PA5 LINE L1 5078 6151 -3 272 343 117 54 chr2 22466055 22466169 -228221685 - L3 LINE CR1 -1337 240 135 370 280 51 89 chr2 22467067 22467417 -228220437 + L1ME LINE L1 5311 5647 -474 2085 152 0 0 chr2 22467422 22467725 -228220129 + AluSq SINE Alu 1 303 -10 4162 86 50 3 chr2 22468577 22469158 -228218696 + LTR14B LTR ERVK 1 608 0 22 0 0 0 chr2 22469422 22469444 -228218410 + AT_rich Low_complexity Low_complexity 1 22 0 443 286 108 26 chr2 22469710 22470053 -228217801 - L1ME LINE L1 -534 5628 5258 33 0 0 0 chr2 22470697 22470730 -228217124 + AT_rich Low_complexity Low_complexity 1 33 0 209 385 10 10 chr2 22471809 22471913 -228215941 - L2 LINE L2 -244 3028 2925 31 26 0 0 chr2 22473237 22473275 -228214579 + AT_rich Low_complexity Low_complexity 1 38 0 418 303 67 30 chr2 22473780 22473945 -228213909 - MIR SINE MIR -28 234 64 232 227 0 0 chr2 22474818 22474862 -228212992 + L2 LINE L2 2703 2746 -568 1011 177 4 62 chr2 22474993 22475058 -228212796 - L1MD1 LINE L1 -5 6237 6170 2250 83 7 0 chr2 22475058 22475347 -228212507 + AluY SINE Alu 1 291 -20 1011 177 4 62 chr2 22475347 22475524 -228212330 - L1MD1 LINE L1 -72 6170 6009 1833 165 38 28 chr2 22475524 22475917 -228211937 - L1MD1 LINE L1 -564 5795 5399 1700 120 12 56 chr2 22475918 22476259 -228211595 + THE1C LTR MaLR 1 326 -49 337 339 130 28 chr2 22476777 22476954 -228210900 + MER91A DNA MER1_type 2 196 0 866 220 54 109 chr2 22477663 22477997 -228209857 + MLT1A1 LTR MaLR 1 352 -13 450 0 0 0 chr2 22477997 22478047 -228209807 + (TA)n Simple_repeat Simple_repeat 1 50 0 261 0 0 0 chr2 22478046 22478075 -228209779 + (CA)n Simple_repeat Simple_repeat 2 30 0 * 866 220 54 109 chr2 22478047 22478126 -228209728 + MLT1A1 LTR MaLR 352 365 0 1564 182 5 39 chr2 22478786 22479244 -228208610 - L1M LINE L1 -751 5395 4965 182 174 22 0 chr2 22479266 22479312 -228208542 + CT-rich Low_complexity Low_complexity 3 49 0 247 163 0 0 chr2 22479329 22479372 -228208482 - L1M4 LINE L1 -1204 4942 4900 2042 149 0 0 chr2 22479384 22479680 -228208174 - AluSx SINE Alu -16 296 1 390 291 52 58 chr2 22481334 22481661 -228206193 - HsTC2 DNA Tc2 -1086 812 488 279 308 112 14 chr2 22482024 22482167 -228205687 + MIR SINE MIR 100 256 -6 203 303 45 22 chr2 22482857 22482946 -228204908 + L2 LINE L2 1468 1558 -1756 1483 234 112 27 chr2 22482947 22483510 -228204344 - L1MCb LINE L1 -4873 1172 562 944 301 18 6 chr2 22483710 22484036 -228203818 + MER93a LTR ERV1 73 402 0 633 284 44 68 chr2 22484051 22484460 -228203394 - L1MCb LINE L1 -5486 559 161 4657 52 3 0 chr2 22484696 22485275 -228202579 - L1PA7 LINE L1 0 6154 5574 567 215 9 9 chr2 22485286 22485393 -228202461 - MER5B DNA MER1_type -6 172 66 301 253 32 118 chr2 22485417 22485638 -228202216 + L2 LINE L2 2682 2883 -431 * 513 236 6 56 chr2 22485622 22485783 -228202071 - L2 LINE L2 0 3313 3161 189 195 0 0 chr2 22485786 22485827 -228202027 + (TA)n Simple_repeat Simple_repeat 1 41 0 3847 158 44 19 chr2 22485830 22486834 -228201020 - L1MB1 LINE L1 -81 6087 5058 1865 320 96 35 chr2 22486834 22488052 -228199802 - L2 LINE L2 -196 3117 1826 1012 309 63 50 chr2 22488056 22488590 -228199264 + L1ME LINE L1 6 532 -5538 1559 201 25 19 chr2 22488590 22488953 -228198901 - MLT1A1 LTR MaLR 0 365 1 1012 309 63 50 chr2 22488953 22489485 -228198369 + L1ME LINE L1 532 1086 -4984 566 266 121 32 chr2 22489489 22489737 -228198117 + L1ME LINE L1 1152 1421 -4840 328 147 29 0 chr2 22591092 22591160 -228096694 - L1MD2 LINE L1 -3 6356 6287 2170 130 0 9 chr2 22591162 22591478 -228096376 + AluSq SINE Alu 1 313 0 2236 111 0 7 chr2 22591782 22592079 -228095775 + AluSq SINE Alu 2 296 -17 872 167 30 15 chr2 22592107 22592305 -228095549 + L1MD3 LINE L1 7794 7994 -1 662 286 12 6 chr2 22592798 22592969 -228094885 - MER90 LTR ERV1 -442 172 1 498 223 67 80 chr2 22593370 22593422 -228094432 + MER112 DNA MER1_type 29 80 -180 321 26 0 0 chr2 22593422 22593460 -228094394 + (CA)n Simple_repeat Simple_repeat 2 39 0 498 223 67 80 chr2 22593460 22593631 -228094223 + MER112 DNA MER1_type 80 249 -11 2113 133 0 3 chr2 22594050 22594344 -228093510 + AluSx SINE Alu 1 293 -19 290 254 26 70 chr2 22595140 22595254 -228092600 - MER5A DNA MER1_type 0 189 70 2250 101 7 0 chr2 22597119 22597446 -228090408 + AluSg SINE Alu 7 335 0 579 265 99 24 chr2 22597448 22597701 -228090153 + L1ME1 LINE L1 5871 6142 -24 6682 174 35 10 chr2 22598129 22599341 -228088513 + MST-int LTR MaLR 216 1457 -194 852 251 5 5 chr2 22599347 22599554 -228088300 - AluJb SINE Alu 0 312 106 1765 129 82 0 chr2 22600523 22600803 -228087051 + AluJb SINE Alu 1 303 -9 1467 166 25 7 chr2 22601284 22601567 -228086287 + L1MA4A LINE L1 6016 6303 0 191 316 93 53 chr2 22601803 22602028 -228085826 - L3 LINE CR1 -15 1562 1329 252 238 16 16 chr2 22602997 22603060 -228084794 + CT-rich Low_complexity Low_complexity 2 64 0 342 238 91 11 chr2 22603063 22603236 -228084618 - L1MC4 LINE L1 0 8042 7725 244 309 43 0 chr2 22603332 22603426 -228084428 + MIR SINE MIR 28 125 -137 216 188 165 24 chr2 22603592 22603677 -228084177 + MIR SINE MIR 79 175 -87 215 323 31 0 chr2 22603808 22603904 -228083950 + MIR SINE MIR 23 121 -141 21 0 0 0 chr2 22603909 22603930 -228083924 + AT_rich Low_complexity Low_complexity 1 21 0 602 173 0 39 chr2 22603936 22604063 -228083791 + L1PB3 LINE L1 6033 6154 0 23 54 0 0 chr2 22604063 22604100 -228083754 + AT_rich Low_complexity Low_complexity 1 37 0 603 239 137 24 chr2 22604470 22604675 -228083179 - MIR SINE MIR 0 262 35 413 266 26 9 chr2 22604841 22604954 -228082900 - L2 LINE L2 -21 3251 3137 24 0 0 0 chr2 22606053 22606077 -228081777 + AT_rich Low_complexity Low_complexity 1 24 0 1566 153 47 4 chr2 22607197 22607452 -228080402 + AluJb SINE Alu 1 266 -46 2181 121 3 0 chr2 22607484 22607773 -228080081 + AluSx SINE Alu 1 290 -22 2368 81 3 0 chr2 22608159 22608454 -228079400 - AluY SINE Alu -15 296 1 1383 162 4 9 chr2 22608462 22608690 -228079164 - THE1C LTR MaLR -148 227 1 357 101 145 159 chr2 22609397 22609445 -228078409 - MIR SINE MIR -24 238 191 1604 123 0 13 chr2 22609445 22609673 -228078181 + AluSc SINE Alu 83 307 -2 357 101 145 159 chr2 22609673 22609762 -228078092 - MIR SINE MIR -71 191 103 232 274 68 68 chr2 22609766 22609912 -228077942 + MIR3 SINE MIR 2 147 -61 24 0 0 0 chr2 22610438 22610462 -228077392 + AT_rich Low_complexity Low_complexity 1 24 0 1774 180 23 0 chr2 22610464 22610769 -228077085 + AluJb SINE Alu 1 312 0 573 295 121 43 chr2 22610808 22611154 -228076700 + L3 LINE CR1 1119 1491 -86 733 277 46 35 chr2 22611154 22611439 -228076415 + L1ME LINE L1 5328 5615 -506 246 243 57 0 chr2 22611878 22611948 -228075906 + MIR SINE MIR 78 151 -111 8187 19 2 3 chr2 22712609 22713825 -227974029 + L1PA2 LINE L1 4887 6155 0 2025 209 127 99 chr2 22715802 22716648 -227971206 - L1MC4 LINE L1 -4 8038 7170 364 296 24 52 chr2 22717501 22717644 -227970210 + MIR SINE MIR 20 161 -65 473 297 45 20 chr2 22717745 22717947 -227969907 - L2 LINE L2 -126 3187 2981 681 269 56 60 chr2 22718230 22718677 -227969177 - MLT1J LTR MaLR 0 511 4 230 237 0 17 chr2 22718985 22719044 -227968810 + (CA)n Simple_repeat Simple_repeat 1 58 0 788 257 59 0 chr2 22720109 22720346 -227967508 + MIR SINE MIR 4 254 -8 233 57 29 0 chr2 22720347 22720382 -227967472 + (TTA)n Simple_repeat Simple_repeat 3 38 0 190 364 16 25 chr2 22720397 22720518 -227967336 - L2 LINE L2 -1406 1908 1789 234 300 73 0 chr2 22720732 22720839 -227967015 - MIR SINE MIR -66 142 82 2186 96 0 68 chr2 22720873 22721196 -227966658 - AluSx SINE Alu -11 301 1 1927 136 39 0 chr2 22722032 22722318 -227965536 - AluSg SINE Alu -13 297 1 1715 179 51 77 chr2 22722623 22723131 -227964723 - MLT1D LTR MaLR -5 500 6 38510 44 28 4 chr2 22724097 22728855 -227958999 - L1P LINE L1 -1272 4874 3 252 242 0 44 chr2 22728908 22728999 -227958855 + T-rich Low_complexity Low_complexity 3 89 0 198 224 26 79 chr2 22729596 22729672 -227958182 - L2 LINE L2 -16 3256 3185 * 544 299 74 30 chr2 22729652 22729883 -227957971 + MIR SINE MIR 6 246 -16 266 285 91 31 chr2 22730734 22731030 -227956824 - L1ME LINE L1 -502 5619 5306 267 300 57 29 chr2 22731361 22731501 -227956353 - MLT1J LTR MaLR -2 509 366 2401 103 0 0 chr2 22732701 22733011 -227954843 - AluY SINE Alu -1 310 1 2571 243 103 26 chr2 22733452 22734149 -227953705 - MER21B LTR ERV1 -58 805 55 183 246 0 0 chr2 22734340 22734397 -227953457 + CT-rich Low_complexity Low_complexity 1 57 0 347 315 64 84 chr2 22734584 22734930 -227952924 - L2 LINE L2 -2 3270 2932 761 272 18 13 chr2 22735009 22735233 -227952621 - MIR SINE MIR -1 261 37 322 251 67 41 chr2 22735352 22735547 -227952307 + Charlie7 DNA MER1_type 2408 2607 -5 869 184 6 13 chr2 22735559 22735717 -227952137 + MER5A DNA MER1_type 1 157 -32 1697 206 51 49 chr2 22736459 22736950 -227950904 - Charlie4a DNA MER1_type 0 508 17 317 326 34 0 chr2 22737394 22737483 -227950371 - MIR3 SINE MIR -19 189 98 1070 240 27 30 chr2 22737485 22737781 -227950073 - MLT1H1 LTR MaLR -2 553 259 459 273 13 27 chr2 22737820 22737970 -227949884 - MLT1H1 LTR MaLR -407 148 1 469 281 75 100 chr2 22737970 22738319 -227949535 - MLT1H1-int LTR MaLR 0 1371 1032 7710 133 25 14 chr2 22738864 22739538 -227948316 - L1MA2 LINE L1 0 7723 7058 3414 82 13 27 chr2 22739538 22739988 -227947866 - MLT2A1 LTR ERVL 0 444 1 7710 133 25 14 chr2 22739988 22741628 -227946226 - L1MA2 LINE L1 -665 7058 5383 4886 183 18 45 chr2 22741624 22742562 -227945292 - L1MA2 LINE L1 -6575 990 79 * 2648 93 128 2 chr2 22742562 22742960 -227944894 + LTR7 LTR ERV1 1 448 -2 4886 183 18 45 chr2 22742960 22743025 -227944829 - L1MA2 LINE L1 -7486 79 14 341 331 24 8 chr2 22744085 22744209 -227943645 - MIR SINE MIR -60 148 23 430 278 137 50 chr2 22744364 22744663 -227943191 - L2 LINE L2 -1 3312 2988 2675 125 5 8 chr2 22744688 22745064 -227942790 + THE1C LTR MaLR 1 375 0 539 233 43 0 chr2 22745082 22745198 -227942656 + MER45A DNA AcHobo 58 178 0 517 276 192 13 chr2 22745199 22745473 -227942381 - L2 LINE L2 -318 2995 2674 24 53 0 0 chr2 22745986 22746024 -227941830 + AT_rich Low_complexity Low_complexity 1 38 0 823 176 28 0 chr2 22746379 22746542 -227941312 + FRAM SINE Alu 1 166 0 183 342 60 68 chr2 22746552 22746669 -227941185 - MIR SINE MIR -73 135 20 1747 220 151 21 chr2 22746833 22747744 -227940110 + L1MC4 LINE L1 5127 6163 -21 550 239 0 67 chr2 22749163 22749343 -227938511 + L2 LINE L2 3137 3304 -9 354 338 101 44 chr2 22749431 22749978 -227937876 - L2 LINE L2 -20 3252 2674 465 302 34 39 chr2 22750982 22751161 -227936693 + MIR3 SINE MIR 21 198 -10 480 303 45 90 chr2 22751494 22751761 -227936093 - L2 LINE L2 -4 3268 3014 233 275 77 50 chr2 22751983 22752165 -227935689 - L1ME LINE L1 -240 5881 5695 243 0 0 0 chr2 22752280 22752307 -227935547 + (TG)n Simple_repeat Simple_repeat 2 28 0 216 323 0 0 chr2 22752344 22752406 -227935448 - MIR SINE MIR -18 244 183 600 224 0 0 chr2 22752776 22752892 -227934962 - MER94 DNA DNA -6 128 13 679 252 97 26 chr2 22755243 22755469 -227932385 + MIR SINE MIR 21 262 0 251 288 150 0 chr2 22755584 22755664 -227932190 + L2 LINE L2 3160 3251 -21 433 241 35 64 chr2 22756664 22756805 -227931049 - MIR3 SINE MIR -3 205 69 275 286 53 105 chr2 22756984 22757117 -227930737 + MIR3 SINE MIR 44 169 -39 861 249 23 0 chr2 22757119 22757296 -227930558 - MER5A DNA MER1_type 0 189 9 1227 180 78 32 chr2 22757990 22758349 -227929505 + MSTC LTR MaLR 1 428 0 320 224 0 0 chr2 22759256 22759323 -227928531 + L1MB2 LINE L1 6069 6135 -36 771 175 8 0 chr2 22759342 22759468 -227928386 + L1MB5 LINE L1 6040 6166 -8 246 62 0 0 chr2 22759486 22759518 -227928336 + (CA)n Simple_repeat Simple_repeat 2 33 0 251 280 134 19 chr2 22759650 22759807 -227928047 + L2 LINE L2 665 839 -2475 202 250 26 0 chr2 22760651 22760727 -227927127 + (TA)n Simple_repeat Simple_repeat 1 78 0 2727 133 36 83 chr2 22760788 22761291 -227926563 - MLT2B1 LTR ERVL -41 479 1 276 137 0 0 chr2 22761301 22761352 -227926502 + (TA)n Simple_repeat Simple_repeat 2 52 0 1198 171 0 38 chr2 22761353 22761563 -227926291 - AluJb SINE Alu -23 289 88 683 229 91 97 chr2 22761642 22761878 -227925976 + MER46C DNA MER2_type 1 236 -102 316 0 0 43 chr2 22761878 22761924 -227925930 + (TG)n Simple_repeat Simple_repeat 2 45 0 683 229 91 97 chr2 22761924 22762027 -227925827 + MER46C DNA MER2_type 236 338 0 2027 171 42 21 chr2 22762233 22762449 -227925405 + MLT1B LTR MaLR 4 233 -157 2153 107 19 105 chr2 22762449 22762859 -227924995 - THE1C LTR MaLR 0 375 1 2027 171 42 21 chr2 22762859 22763021 -227924833 + MLT1B LTR MaLR 233 390 0 37 39 0 0 chr2 22763956 22764007 -227923847 + AT_rich Low_complexity Low_complexity 1 51 0 2363 73 3 13 chr2 22764657 22764960 -227922894 - AluSp SINE Alu -13 300 1 2238 245 61 11 chr2 22766450 22767006 -227920848 - MLT1E LTR MaLR -8 585 2 183 42 0 0 chr2 22768275 22768299 -227919555 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 228 333 14 62 chr2 22768369 22768513 -227919341 + MIR SINE MIR 41 177 -85 376 230 58 0 chr2 22769999 22770086 -227917768 + MER5A DNA MER1_type 16 107 -82 3150 168 59 35 chr2 22771215 22772144 -227915710 - L1MA9 LINE L1 -659 5653 4690 1562 168 0 21 chr2 22772126 22772417 -227915437 + L1MA9 LINE L1 5636 5920 -392 * 245 278 22 0 chr2 22773664 22773754 -227914100 + L1ME LINE L1 5770 5861 -260 33 25 0 0 chr2 22773849 22773889 -227913965 + AT_rich Low_complexity Low_complexity 1 40 0 243 88 0 0 chr2 22774021 22774055 -227913799 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 313 321 22 22 chr2 22775021 22775158 -227912696 + MIR SINE MIR 36 172 -90 1234 234 49 25 chr2 22775159 22775593 -227912261 + MER74C LTR ERVL 4 591 -31 2270 113 0 0 chr2 22775683 22775984 -227911870 + AluSx SINE Alu 1 301 -11 301 317 139 19 chr2 22776104 22776464 -227911390 + MLT1J2 LTR MaLR 24 426 -24 2641 250 110 87 chr2 22776758 22777501 -227910353 + L1ME1 LINE L1 34 759 -5476 869 64 112 0 chr2 22777501 22777626 -227910228 + MER85 DNA T2_type 1 139 0 2641 250 110 87 chr2 22777626 22778352 -227909502 + L1ME1 LINE L1 759 1468 -4767 2262 91 7 0 chr2 22778352 22778638 -227909216 + AluSg SINE Alu 1 288 -22 2641 250 110 87 chr2 22778638 22779156 -227908698 + L1ME1 LINE L1 1468 1973 -4262 414 255 52 83 chr2 22779156 22779348 -227908506 - MER5A DNA MER1_type -1 188 3 2641 250 110 87 chr2 22779348 22780787 -227907067 + L1ME1 LINE L1 1973 3379 -2856 597 69 0 35 chr2 22780787 22780874 -227906980 - AluSc SINE Alu -6 303 220 2641 250 110 87 chr2 22780874 22781350 -227906504 + L1ME1 LINE L1 3379 3843 -2392 2395 92 3 0 chr2 22781350 22781653 -227906201 - AluSc SINE Alu -5 304 1 2641 250 110 87 chr2 22781653 22781865 -227905989 + L1ME1 LINE L1 3843 4049 -2186 1520 192 0 8 chr2 22781865 22782131 -227905723 + AluJo SINE Alu 1 264 -48 2641 250 110 87 chr2 22782131 22784019 -227903835 + L1ME1 LINE L1 4049 6216 -19 444 320 70 10 chr2 22784418 22784618 -227903236 + MIR SINE MIR 47 258 -4 48 43 0 0 chr2 22784766 22784835 -227903019 + AT_rich Low_complexity Low_complexity 1 69 0 425 237 58 36 chr2 22786159 22786298 -227901556 + MLT1J2 LTR MaLR 67 208 -242 383 163 0 62 chr2 22786429 22786509 -227901345 + MLT1I LTR MaLR 335 409 0 214 303 22 22 chr2 22786798 22786887 -227900967 - MIR SINE MIR -115 147 59 453 240 97 40 chr2 22787780 22787955 -227899899 + MIR SINE MIR 29 213 -49 203 194 0 0 chr2 22787955 22787991 -227899863 + (TA)n Simple_repeat Simple_repeat 1 36 0 301 175 0 18 chr2 22788137 22788194 -227899660 + L2 LINE L2 3254 3309 -4 278 241 17 0 chr2 22788571 22788629 -227899225 - L3 LINE CR1 -7 1570 1512 6496 140 55 27 chr2 22789016 22789621 -227898233 - Tigger3b DNA MER2_type -1797 1231 645 2235 107 7 0 chr2 22789621 22789919 -227897935 + AluSx SINE Alu 1 300 -12 6496 140 55 27 chr2 22789919 22789948 -227897906 - Tigger3b DNA MER2_type -2383 645 618 246 32 0 0 chr2 22789948 22789979 -227897875 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6496 140 55 27 chr2 22789979 22790016 -227897838 - Tigger3b DNA MER2_type -2410 618 584 2611 33 3 3 chr2 22790016 22790317 -227897537 + AluY SINE Alu 1 301 -10 6496 140 55 27 chr2 22790317 22790840 -227897014 - Tigger3b DNA MER2_type -2444 584 1 255 157 0 0 chr2 22791468 22791519 -227896335 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 688 295 23 27 chr2 22795934 22796192 -227891662 - MIR SINE MIR 0 262 6 2086 107 30 10 chr2 22796284 22796584 -227891270 + AluSx SINE Alu 1 306 -6 323 265 166 11 chr2 22796720 22796901 -227890953 + MIR SINE MIR 31 239 -23 913 229 99 103 chr2 22798245 22798582 -227889272 - MLT1J2 LTR MaLR -16 434 98 1871 130 121 18 chr2 22798582 22798912 -227888942 + THE1B LTR MaLR 1 364 0 913 229 99 103 chr2 22798912 22799010 -227888844 - MLT1J2 LTR MaLR -352 98 1 186 186 93 0 chr2 22799010 22799053 -227888801 - L2 LINE L2 -218 3054 3008 1357 169 87 85 chr2 22799936 22800314 -227887540 - MLT1B LTR MaLR -11 379 1 1354 199 81 46 chr2 22801110 22801481 -227886373 + L1MA10 LINE L1 5943 6326 -8 2259 90 21 0 chr2 22801481 22801792 -227886062 - AluY SINE Alu 0 317 1 692 271 96 9 chr2 22802312 22802541 -227885313 - MLT1J2 LTR MaLR 0 450 202 440 221 139 0 chr2 22802571 22802693 -227885161 - MLT1J2 LTR MaLR -307 143 5 1039 176 62 59 chr2 22803807 22804096 -227883758 + MER33 DNA MER1_type 35 324 0 617 245 101 43 chr2 22804097 22804305 -227883549 + MIR SINE MIR 32 251 -11 195 100 0 0 chr2 22806050 22806080 -227881774 + (CA)n Simple_repeat Simple_repeat 2 31 0 1179 215 32 3 chr2 22807299 22807732 -227880122 + Charlie4a DNA MER1_type 21 495 -13 2160 112 3 26 chr2 22807931 22808234 -227879620 + AluSx SINE Alu 1 296 -16 248 348 37 18 chr2 22809778 22809942 -227877912 - L2 LINE L2 -202 3070 2904 256 327 109 0 chr2 22810177 22810287 -227877567 - L2 LINE L2 -962 2352 2231 222 268 73 24 chr2 22810391 22810473 -227877381 - MIR3 SINE MIR -11 197 112 22 35 0 0 chr2 22812456 22812485 -227875369 + AT_rich Low_complexity Low_complexity 1 29 0 502 243 25 55 chr2 22813176 22813378 -227874476 + L2 LINE L2 3109 3304 -9 1308 211 39 3 chr2 22813381 22813666 -227874188 + AluJo SINE Alu 1 295 -17 539 280 92 13 chr2 22814935 22815174 -227872680 + MIR SINE MIR 3 260 -2 2539 143 30 39 chr2 22816512 22816980 -227870874 - MLT2C2 LTR ERVL 0 464 1 1543 176 117 6 chr2 22818218 22818542 -227869312 - MER46B DNA MER2_type 0 236 2 292 183 97 65 chr2 22818472 22818565 -227869289 + MER46A DNA MER2_type 75 170 -66 * 908 183 0 33 chr2 22818588 22818768 -227869086 - AluJb SINE Alu -2 310 137 472 325 74 15 chr2 22819233 22819436 -227868418 - MIR SINE MIR 0 262 48 519 226 0 0 chr2 22821287 22821446 -227866408 + (TCCA)n Simple_repeat Simple_repeat 2 160 0 445 229 8 0 chr2 22821603 22821721 -227866133 + MIR SINE MIR 79 197 -65 238 246 31 15 chr2 22821723 22821788 -227866066 - MER113 DNA MER1_type? -1 520 455 1979 250 83 37 chr2 22821901 22822553 -227865301 + L1ME3A LINE L1 5208 5908 -262 1294 210 105 9 chr2 22822553 22822886 -227864968 - MLT1A1 LTR MaLR 0 365 1 1979 250 83 37 chr2 22822886 22823065 -227864789 + L1ME3A LINE L1 5908 6077 -93 789 298 28 0 chr2 22823245 22823463 -227864391 - MIR SINE MIR -37 225 2 345 47 0 0 chr2 22824886 22824929 -227862925 + (CA)n Simple_repeat Simple_repeat 2 44 0 182 267 0 0 chr2 22825305 22825350 -227862504 + L2 LINE L2 3207 3251 -21 232 384 82 7 chr2 22827343 22827489 -227860365 - MIR3 SINE MIR -23 185 29 1734 148 80 45 chr2 22827509 22827886 -227859968 + MLT1B LTR MaLR 1 390 0 547 293 6 6 chr2 22828079 22828253 -227859601 - MIR SINE MIR -85 177 4 320 319 12 62 chr2 22828255 22828366 -227859488 + L3 LINE CR1 1425 1527 -50 2364 117 0 0 chr2 22828366 22828675 -227859179 - AluSq SINE Alu -4 309 1 320 319 12 62 chr2 22828675 22828723 -227859131 + L3 LINE CR1 1527 1576 -1 348 24 0 0 chr2 22830122 22830163 -227857691 + (CCA)n Simple_repeat Simple_repeat 2 42 0 314 289 37 15 chr2 22830393 22830528 -227857326 - MIR3 SINE MIR -63 145 8 187 254 18 55 chr2 22831222 22831332 -227856522 + L2 LINE L2 2855 2960 -312 21 0 0 0 chr2 22831955 22831976 -227855878 + AT_rich Low_complexity Low_complexity 1 21 0 2283 110 0 25 chr2 22832632 22832950 -227854904 - AluSx SINE Alu -2 310 1 2373 162 24 75 chr2 22833365 22833824 -227854030 + MLT1D LTR MaLR 1 431 -74 3771 81 2 2 chr2 22833824 22834320 -227853534 - L1PA13 LINE L1 -3 6160 5665 2373 162 24 75 chr2 22834320 22834392 -227853462 + MLT1D LTR MaLR 431 505 0 597 294 13 0 chr2 22834392 22834545 -227853309 - MIR SINE MIR -106 156 2 2543 185 69 42 chr2 22834739 22835319 -227852535 + L1MB5 LINE L1 5535 6133 -41 4283 51 2 6 chr2 22835319 22835848 -227852006 + L1PA8 LINE L1 5639 6165 -7 2543 185 69 42 chr2 22835848 22835879 -227851975 + L1MB5 LINE L1 6133 6162 -12 2328 175 8 25 chr2 22835884 22836359 -227851495 - L1MB5 LINE L1 -173 6001 5535 372 0 0 60 chr2 22836372 22836422 -227851432 + L1PA8 LINE L1 6120 6166 -6 23 0 0 0 chr2 22836443 22836466 -227851388 + AT_rich Low_complexity Low_complexity 1 23 0 219 309 12 25 chr2 22836488 22836569 -227851285 - L2 LINE L2 -219 3053 2974 273 333 67 0 chr2 22837968 22838073 -227849781 - MIR SINE MIR -10 252 141 395 286 234 5 chr2 22838344 22838536 -227849318 + MIR SINE MIR 10 245 -17 1178 284 95 39 chr2 22838607 22839330 -227848524 + L2 LINE L2 2140 2903 -411 915 196 60 25 chr2 22839368 22839506 -227848348 - Charlie4a DNA MER1_type -1460 501 369 834 138 22 7 chr2 22839506 22839644 -227848210 + L1MC1 LINE L1 6193 6332 -1 915 196 60 25 chr2 22839644 22839810 -227848044 - Charlie4a DNA MER1_type -1592 369 141 204 40 0 0 chr2 22840520 22840545 -227847309 + (ATG)n Simple_repeat Simple_repeat 3 27 0 213 264 231 0 chr2 22840557 22840648 -227847206 - MIR SINE MIR -44 218 107 219 222 0 0 chr2 22841124 22841169 -227846685 + (TTAGGG)n Simple_repeat Simple_repeat 3 47 0 378 42 0 0 chr2 22841795 22841843 -227846011 + (A)n Simple_repeat Simple_repeat 1 48 0 1619 130 163 71 chr2 22842133 22842525 -227845329 + MSTA LTR MaLR 1 428 0 216 232 137 32 chr2 22842748 22842843 -227845011 + MIR SINE MIR 41 145 -63 410 321 177 18 chr2 22843679 22843956 -227843898 - MLT1J2 LTR MaLR -49 401 81 329 286 10 10 chr2 22844158 22844256 -227843598 + MER8 DNA MER2_type 1 98 -141 568 224 196 83 chr2 22846055 22846453 -227841401 - MLT1J LTR MaLR -54 457 15 321 155 0 0 chr2 22846888 22846946 -227840908 + GA-rich Low_complexity Low_complexity 4 61 0 183 236 73 0 chr2 22847585 22847640 -227840214 - MIR3 SINE MIR -15 193 135 320 108 215 0 chr2 22848875 22848940 -227838914 - MADE1 DNA Mariner -1 79 1 1825 176 76 58 chr2 22849649 22850098 -227837756 + MLT1C LTR MaLR 3 459 -8 471 35 0 0 chr2 22850283 22850340 -227837514 + (CA)n Simple_repeat Simple_repeat 2 58 0 2101 138 3 0 chr2 22850443 22850734 -227837120 - AluJb SINE Alu -20 292 1 231 284 39 20 chr2 22853325 22853427 -227834427 - MER5B DNA MER1_type -57 121 18 385 299 8 8 chr2 22854178 22854295 -227833559 + MER5B DNA MER1_type 3 119 -59 2345 85 3 3 chr2 22854405 22854698 -227833156 + AluSp SINE Alu 1 293 -20 2196 153 18 10 chr2 22854825 22855212 -227832642 + MLT1B LTR MaLR 1 390 0 31 0 0 0 chr2 22855818 22855849 -227832005 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 22856516 22856538 -227831316 + AT_rich Low_complexity Low_complexity 1 22 0 218 31 0 31 chr2 22856763 22856795 -227831059 + (CAAAAA)n Simple_repeat Simple_repeat 3 33 0 655 245 80 0 chr2 22857228 22857379 -227830475 + MER96 DNA MER1_type? 12 174 -1 281 341 16 16 chr2 22857690 22857819 -227830035 + L2 LINE L2 2571 2699 -615 * 864 247 6 0 chr2 22857804 22857982 -227829872 + MER5A DNA MER1_type 11 189 0 215 130 0 87 chr2 22859612 22859658 -227828196 + L2 LINE L2 3231 3272 0 193 298 114 46 chr2 22860373 22860635 -227827219 - L2 LINE L2 -832 2482 2203 385 276 69 21 chr2 22861878 22862023 -227825831 + L2 LINE L2 3162 3313 0 197 211 66 26 chr2 22863118 22863194 -227824660 + MIR SINE MIR 103 181 -81 444 248 35 64 chr2 22863881 22864083 -227823771 + L1MC5 LINE L1 7698 7893 -68 21 0 0 0 chr2 22864178 22864199 -227823655 + AT_rich Low_complexity Low_complexity 1 21 0 286 287 116 53 chr2 22867482 22868145 -227819709 - L1M4 LINE L1 -1556 4590 3886 1229 255 41 11 chr2 22868595 22868964 -227818890 + L1M4 LINE L1 4724 5103 -1043 * 7424 234 62 20 chr2 22868962 22871400 -227816454 - L1M4c LINE L1 -1641 5316 2819 1696 111 15 0 chr2 22871400 22871662 -227816192 - L1MA2 LINE L1 0 6304 6039 7424 234 62 20 chr2 22871662 22871747 -227816107 - L1M4c LINE L1 -4138 2819 2739 328 22 0 0 chr2 22872027 22872072 -227815782 - AluY SINE Alu 0 300 256 6885 232 55 28 chr2 22872167 22874617 -227813237 - L1M4c LINE L1 -4453 2685 9 1742 197 42 3 chr2 22875542 22875877 -227811977 + MER7A DNA MER2_type 1 346 0 439 270 40 16 chr2 22876508 22876634 -227811220 + L2 LINE L2 3180 3308 -5 2291 138 19 50 chr2 22877020 22877396 -227810458 - THE1B LTR MaLR 0 364 1 12083 98 22 5 chr2 22877396 22878949 -227808905 - THE1B-int LTR MaLR 0 1580 1 2360 115 33 36 chr2 22878949 22879314 -227808540 - THE1B LTR MaLR 0 364 1 225 178 0 0 chr2 22879408 22879453 -227808401 + GA-rich Low_complexity Low_complexity 1 45 0 1962 180 44 31 chr2 22879457 22879993 -227807861 + MLT2A2 LTR ERVL 5 554 0 425 188 0 10 chr2 22880000 22880096 -227807758 + GA-rich Low_complexity Low_complexity 3 97 0 21 0 0 0 chr2 22880573 22880594 -227807260 + AT_rich Low_complexity Low_complexity 1 21 0 408 20 0 0 chr2 22880625 22880674 -227807180 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 545 308 43 0 chr2 22881904 22882089 -227805765 - MIR SINE MIR -21 241 49 428 351 53 61 chr2 22883310 22883669 -227804185 - L2 LINE L2 -14 3258 2903 452 275 106 25 chr2 22884891 22885051 -227802803 + MIR SINE MIR 8 180 -82 269 246 18 109 chr2 22885438 22885548 -227802306 - MIR SINE MIR -56 206 107 25 31 0 0 chr2 22888227 22888259 -227799595 + AT_rich Low_complexity Low_complexity 1 32 0 3892 245 41 8 chr2 22888690 22889747 -227798107 - L1M4 LINE L1 -1612 4534 3443 2334 216 55 24 chr2 22889748 22889975 -227797879 + L1M2 LINE L1 1547 1765 -5084 1864 181 0 6 chr2 22889975 22890289 -227797565 + AluJb SINE Alu 1 312 0 2334 216 55 24 chr2 22890289 22890733 -227797121 + L1M2 LINE L1 1765 2239 -4610 363 265 0 10 chr2 22890719 22890814 -227797040 + L1PB4 LINE L1 6054 6149 -7 * 955 68 0 0 chr2 22890814 22890931 -227796923 + L1PA10 LINE L1 6050 6166 -2 5003 226 40 13 chr2 22890953 22892134 -227795720 - L1MCb LINE L1 -4851 1194 3 190 261 87 0 chr2 22892149 22892195 -227795659 + MIR SINE MIR 97 146 -116 964 218 9 28 chr2 22894864 22895080 -227792774 + MIR SINE MIR 41 252 -10 5563 105 13 20 chr2 22898405 22899233 -227788621 - L1PA10 LINE L1 -3 6165 5344 7968 119 13 1 chr2 22899335 22900521 -227787333 - L1PA10 LINE L1 -873 5273 4074 265 326 56 21 chr2 22903322 22903466 -227784388 - L3 LINE CR1 -142 1435 1287 730 159 24 0 chr2 22903540 22903666 -227784188 - LTR40a LTR ERVL 0 519 391 579 329 81 0 chr2 22903989 22904199 -227783655 - MIR SINE MIR 0 262 36 237 360 83 12 chr2 22904557 22904732 -227783122 + MIR SINE MIR 25 211 -51 2340 113 0 3 chr2 22905296 22905606 -227782248 + AluSx SINE Alu 1 309 -3 369 0 0 0 chr2 22905631 22905672 -227782182 + (CA)n Simple_repeat Simple_repeat 2 42 0 192 341 66 0 chr2 22905675 22905766 -227782088 + L3 LINE CR1 846 942 -635 468 331 54 0 chr2 22905987 22906153 -227781701 + L3 LINE CR1 964 1138 -439 1091 224 35 38 chr2 22906175 22906488 -227781366 + LTR40a LTR ERVL 1 312 -207 268 242 0 15 chr2 22906869 22906935 -227780919 + MER5B DNA MER1_type 1 65 -113 21 0 0 0 chr2 22906950 22906971 -227780883 + AT_rich Low_complexity Low_complexity 1 21 0 2406 93 19 0 chr2 22908262 22908572 -227779282 + L1PA10 LINE L1 5851 6166 -2 190 326 119 41 chr2 22908953 22909388 -227778466 + L2 LINE L2 2383 2851 -463 960 297 68 38 chr2 22909418 22909950 -227777904 + LTR67 LTR ERVL 8 555 -2 296 102 20 0 chr2 22910028 22910077 -227777777 + (CA)n Simple_repeat Simple_repeat 1 50 0 450 323 8 8 chr2 22910147 22910280 -227777574 - L2 LINE L2 0 3313 3181 189 74 0 0 chr2 22910352 22910379 -227777475 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 348 247 72 92 chr2 22911649 22911900 -227775954 + L2 LINE L2 3029 3274 -39 234 280 13 27 chr2 22911940 22912015 -227775839 - L3 LINE CR1 -654 923 850 526 148 12 0 chr2 22912021 22912102 -227775752 - AluSx SINE Alu -14 296 215 1128 136 0 0 chr2 22912103 22912257 -227775597 - AluSx SINE Alu -158 154 1 189 185 56 56 chr2 22912549 22912603 -227775251 - MIR3 SINE MIR -27 181 128 619 273 44 1 chr2 22915668 22915896 -227771958 + MIR SINE MIR 23 260 -2 183 361 31 10 chr2 22916952 22917049 -227770805 + L3 LINE CR1 984 1082 -495 305 300 94 47 chr2 22917138 22917435 -227770419 + L1ME4a LINE L1 5604 5914 -207 257 276 11 0 chr2 22917472 22917559 -227770295 + L1ME4a LINE L1 6000 6087 -34 1548 187 154 18 chr2 22917679 22918022 -227769832 - MLT1B LTR MaLR 0 390 1 948 98 11 7 chr2 22918626 22918913 -227768941 + (CA)n Simple_repeat Simple_repeat 1 288 0 730 240 54 36 chr2 22918947 22919168 -227768686 + MIR SINE MIR 37 261 -1 330 26 0 0 chr2 22919634 22919673 -227768181 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 737 212 114 10 chr2 22919814 22920007 -227767847 + LTR16A1 LTR ERVL 245 457 0 196 125 78 0 chr2 22920818 22920882 -227766972 + (CA)n Simple_repeat Simple_repeat 2 70 0 1718 178 10 3 chr2 22921561 22921859 -227765995 - AluJb SINE Alu -12 300 1 870 198 6 0 chr2 22922453 22922610 -227765244 + L1PB4 LINE L1 5968 6125 -31 434 141 28 0 chr2 22922660 22922731 -227765123 + L1PA16 LINE L1 6081 6153 -13 1837 166 30 51 chr2 22922806 22923179 -227764675 - MLT1A1 LTR MaLR 0 365 1 199 290 32 0 chr2 22923190 22923252 -227764602 + L2 LINE L2 3250 3313 0 508 317 60 33 chr2 22923987 22924287 -227763567 - L2 LINE L2 -385 2929 2622 238 289 11 22 chr2 22924819 22924909 -227762945 - MIR3 SINE MIR -4 204 116 24 53 0 0 chr2 22925575 22925613 -227762241 + AT_rich Low_complexity Low_complexity 1 38 0 270 261 65 66 chr2 22925911 22926071 -227761783 - MLT1H LTR MaLR 0 549 382 551 286 6 23 chr2 22926205 22926380 -227761474 - MLT1H LTR MaLR -329 220 49 1575 231 21 9 chr2 22926513 22926850 -227761004 + MER58B DNA MER1_type 1 341 0 962 139 61 113 chr2 22926858 22927168 -227760686 - MER33 DNA MER1_type 0 324 31 250 319 22 22 chr2 22927324 22927415 -227760439 + L2 LINE L2 3182 3272 0 785 226 39 85 chr2 22927537 22927643 -227760211 + L1ME LINE L1 33 142 -5928 1494 158 4 15 chr2 22927643 22927903 -227759951 + AluJb SINE Alu 1 257 -55 785 226 39 85 chr2 22927903 22928102 -227759752 + L1ME LINE L1 142 324 -5746 692 174 0 8 chr2 22928246 22928367 -227759487 + L2 LINE L2 3189 3308 -5 2404 152 48 33 chr2 22931240 22931700 -227756154 + MLT1C LTR MaLR 1 467 0 231 297 11 22 chr2 22931896 22931987 -227755867 + MIR SINE MIR 1 90 -172 422 254 219 12 chr2 22932655 22932824 -227755030 + MER63A DNA MER1_type 1 204 -6 289 306 41 0 chr2 22933743 22933841 -227754013 + MIR SINE MIR 43 144 -64 494 270 11 54 chr2 22934886 22935017 -227752837 - MIR SINE MIR -15 247 125 2011 121 30 3 chr2 22935017 22935314 -227752540 + AluSx SINE Alu 1 305 -7 494 270 11 54 chr2 22935314 22935367 -227752487 - MIR SINE MIR -137 125 71 643 271 134 29 chr2 22935369 22935712 -227752142 - MLT1J1 LTR MaLR 0 446 68 185 143 0 0 chr2 22935811 22935839 -227752015 - MIR SINE MIR -195 67 40 2064 242 75 17 chr2 22936332 22936866 -227750988 + MLT1F1 LTR MaLR 1 565 -2 1077 211 5 22 chr2 22937081 22937304 -227750550 + MER20B DNA MER1_type 1 219 0 986 219 149 54 chr2 22937530 22937919 -227749935 - MLT1J2 LTR MaLR -5 445 20 941 214 0 16 chr2 22939830 22940017 -227747837 + MER5A DNA MER1_type 6 189 0 408 344 56 11 chr2 22940134 22940314 -227747540 + MER91A DNA MER1_type 1 188 -8 211 353 0 0 chr2 22941380 22941448 -227746406 + GA-rich Low_complexity Low_complexity 4 71 0 456 297 22 22 chr2 22941668 22941850 -227746004 - MIR SINE MIR -69 193 12 265 220 34 0 chr2 22942077 22942136 -227745718 + L2 LINE L2 3248 3308 -5 220 307 100 14 chr2 22942163 22942303 -227745551 - MIR SINE MIR -15 247 96 1539 219 86 46 chr2 22942528 22943049 -227744805 - MLT1H1 LTR MaLR -13 542 1 546 260 154 45 chr2 22943119 22943660 -227744194 + MLT1G LTR MaLR 17 588 -2 1142 257 133 32 chr2 22944636 22945103 -227742751 + LTR33 LTR ERVL 1 514 -7 2862 9 6 0 chr2 22945551 22945874 -227741980 - L1PA2 LINE L1 0 6155 5831 2235 120 52 88 chr2 22946065 22946409 -227741445 - MSTC LTR MaLR -3 425 99 2099 128 4 0 chr2 22946409 22946690 -227741164 - AluSx SINE Alu -30 282 1 2235 120 52 88 chr2 22946690 22946786 -227741068 - MSTC LTR MaLR -329 99 1 545 303 6 11 chr2 22948241 22948419 -227739435 + MER5B DNA MER1_type 2 178 0 1748 232 32 34 chr2 22952630 22953126 -227734728 + MER20B DNA MER1_type 165 659 -124 1632 230 45 15 chr2 22953128 22953597 -227734257 + MER20B DNA MER1_type 290 772 -11 3894 221 123 62 chr2 22953841 22954071 -227733783 - L1MC4 LINE L1 -59 7983 7769 2401 77 3 32 chr2 22954071 22954383 -227733471 + AluY SINE Alu 1 303 -8 3894 221 123 62 chr2 22954383 22955588 -227732266 - L1MC4 LINE L1 -273 7769 6460 205 109 43 0 chr2 22955800 22955846 -227732008 + (TA)n Simple_repeat Simple_repeat 2 49 0 434 286 102 39 chr2 22955928 22956558 -227731296 - L1MEd LINE L1 -853 1637 884 261 0 0 0 chr2 22958025 22958054 -227729800 + (TG)n Simple_repeat Simple_repeat 2 30 0 333 0 0 0 chr2 22958454 22958491 -227729363 + (TG)n Simple_repeat Simple_repeat 2 38 0 303 283 50 25 chr2 22958698 22958857 -227728997 - MER103 DNA DNA -3 163 1 186 43 0 0 chr2 22960549 22960572 -227727282 + (T)n Simple_repeat Simple_repeat 1 23 0 406 261 87 0 chr2 22961039 22961055 -227726799 - L1MA10 LINE L1 -5 6329 6314 1251 252 46 37 chr2 22961055 22961515 -227726339 - L1ME1 LINE L1 -23 6143 5680 1180 202 11 74 chr2 22961525 22961877 -227725977 - L1MEc LINE L1 -3525 2690 2361 798 180 14 0 chr2 22961911 22962050 -227725804 - MER46A DNA MER2_type -74 162 22 457 189 31 24 chr2 22962061 22962188 -227725666 - L1MEc LINE L1 -3998 2398 2271 * 1453 239 98 0 chr2 22962172 22962540 -227725314 - L1MD2 LINE L1 -4 6355 5952 1655 215 23 5 chr2 22962544 22962934 -227724920 - L1MEc LINE L1 -2091 4124 3728 1191 207 17 20 chr2 22962916 22963264 -227724590 - L1MEc LINE L1 -4081 2315 1969 * 962 289 9 33 chr2 22963265 22963597 -227724257 - L1MEc LINE L1 -6065 331 8 516 244 262 0 chr2 22964885 22965057 -227722797 - MIR SINE MIR -45 217 1 641 247 123 67 chr2 22965242 22965512 -227722342 + MLT1J2 LTR MaLR 67 320 -89 991 215 34 130 chr2 22965512 22965926 -227721928 + MLT1A2 LTR MaLR 1 374 0 641 247 123 67 chr2 22965926 22966022 -227721832 + MLT1J2 LTR MaLR 320 409 0 243 298 0 0 chr2 22966231 22966315 -227721539 + MIR3 SINE MIR 116 199 -9 218 284 118 120 chr2 22967845 22968261 -227719593 + L2 LINE L2 2853 3267 -5 261 0 0 0 chr2 22968318 22968347 -227719507 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 342 0 0 0 chr2 22968346 22968384 -227719470 + (TA)n Simple_repeat Simple_repeat 1 38 0 207 0 0 0 chr2 22968627 22968650 -227719204 + (T)n Simple_repeat Simple_repeat 1 23 0 373 302 22 22 chr2 22969811 22969950 -227717904 - MIR SINE MIR -85 177 39 180 291 102 47 chr2 22970103 22970186 -227717668 - MER5A DNA MER1_type -22 167 73 2313 97 0 0 chr2 22970186 22970476 -227717378 - AluSc SINE Alu -19 290 1 180 291 102 47 chr2 22970476 22970519 -227717335 - MER5A DNA MER1_type -116 73 34 196 267 13 53 chr2 22970640 22970715 -227717139 - L3 LINE CR1 -166 1411 1340 343 316 15 0 chr2 22970740 22970873 -227716981 - MIR SINE MIR 0 262 128 1025 125 6 6 chr2 22971097 22971257 -227716597 + L1PA10 LINE L1 5998 6157 -11 341 278 119 0 chr2 22972331 22972457 -227715397 + MIR3 SINE MIR 47 187 -21 1995 137 139 36 chr2 22976155 22976543 -227711311 + MSTA LTR MaLR 1 428 0 630 307 62 8 chr2 22977649 22977890 -227709964 - L3b LINE CR1 -24 1559 1306 25 0 0 0 chr2 22979242 22979267 -227708587 + AT_rich Low_complexity Low_complexity 1 25 0 2550 60 0 0 chr2 22979272 22979572 -227708282 - AluY SINE Alu -11 300 1 200 228 38 51 chr2 22979797 22979876 -227707978 - L2 LINE L2 -13 3259 3182 2410 214 37 39 chr2 22979895 22980517 -227707337 + MLT1E3 LTR MaLR 4 624 0 269 249 193 67 chr2 22980685 22980970 -227706884 - L2 LINE L2 -356 2958 2638 1175 145 100 10 chr2 22981082 22981282 -227706572 + MSTA LTR MaLR 211 428 0 1346 227 82 51 chr2 22981282 22981816 -227706038 + L1ME LINE L1 500 1050 -5155 * 2498 202 41 117 chr2 22981808 22982238 -227705616 + L1ME1 LINE L1 4212 4673 -1473 300 116 0 0 chr2 22982238 22982281 -227705573 + tRNA-Phe-TTC tRNA tRNA 2 44 -32 2498 202 41 117 chr2 22982281 22982880 -227704974 + L1ME1 LINE L1 4673 5202 -944 41174 71 6 8 chr2 22982882 22989031 -227698823 + L1PA5 LINE L1 5 6153 -1 2944 220 71 24 chr2 22989024 22989360 -227698494 + L1ME1 LINE L1 5188 5507 -659 * 2283 114 0 16 chr2 22989360 22989675 -227698179 - AluSq SINE Alu -3 310 1 2944 220 71 24 chr2 22989675 22990269 -227697585 + L1ME1 LINE L1 5507 6160 -6 496 250 77 42 chr2 22990282 22990542 -227697312 + L1ME LINE L1 1018 1286 -4929 4358 166 59 32 chr2 22990544 22991067 -227696787 + L1MB1 LINE L1 5146 5713 -476 1709 193 7 0 chr2 22991067 22991362 -227696492 - AluJo SINE Alu -15 297 1 4358 166 59 32 chr2 22991362 22991823 -227696031 + L1MB1 LINE L1 5713 6160 -29 757 199 9 87 chr2 22991900 22991944 -227695910 + L1ME LINE L1 2020 2066 -4330 1214 170 58 0 chr2 22991944 22992150 -227695704 - MER20 DNA MER1_type 0 219 2 270 0 0 0 chr2 22992155 22992185 -227695669 + (CA)n Simple_repeat Simple_repeat 1 30 0 757 199 9 87 chr2 22992185 22992330 -227695524 + L1ME LINE L1 2070 2181 -4215 2137 159 81 8 chr2 22992330 22992727 -227695127 + MSTB LTR MaLR 1 426 0 757 199 9 87 chr2 22992727 22992862 -227694992 + L1ME LINE L1 2181 2325 -4071 1005 85 8 0 chr2 22992865 22992994 -227694860 + AluY SINE Alu 1 130 -181 1255 222 36 47 chr2 22992995 22993031 -227694823 + L1ME LINE L1 2284 2319 -3896 2595 66 0 0 chr2 22993031 22993334 -227694520 + AluY SINE Alu 1 303 -8 1255 222 36 47 chr2 22993334 22993662 -227694192 + L1ME LINE L1 2319 2644 -3571 416 304 12 31 chr2 22993843 22994004 -227693850 - MER5B DNA MER1_type 0 178 21 210 358 58 7 chr2 22994120 22994257 -227693597 - L3 LINE CR1 -701 876 733 326 335 157 12 chr2 22994422 22994741 -227693113 + L2 LINE L2 2944 3308 -5 184 297 62 0 chr2 22994951 22995015 -227692839 - MIR SINE MIR -108 154 87 1737 163 19 26 chr2 22995608 22995921 -227691933 - AluJo SINE Alu -1 311 1 2006 126 3 21 chr2 22996242 22996556 -227691298 - AluSx SINE Alu 0 309 1 419 276 15 15 chr2 22996627 22996761 -227691093 + MER5B DNA MER1_type 45 178 0 616 231 17 52 chr2 22998799 22998972 -227688882 - MER91B DNA MER1_type -5 185 19 183 377 44 0 chr2 22999428 22999542 -227688312 - MIR SINE MIR -55 153 35 309 333 20 20 chr2 23000004 23000154 -227687700 - MIR SINE MIR -112 150 1 252 59 0 0 chr2 23000223 23000257 -227687597 + (ATG)n Simple_repeat Simple_repeat 3 36 0 324 0 0 0 chr2 23001274 23001310 -227686544 + (A)n Simple_repeat Simple_repeat 1 36 0 541 291 100 33 chr2 23002793 23003064 -227684790 - MER102a DNA MER1_type -3 327 39 236 224 17 0 chr2 23003355 23003413 -227684441 - LTR66 LTR ERVL -154 456 398 404 288 100 17 chr2 23003463 23003703 -227684151 - L2 LINE L2 -761 2553 2294 581 259 41 12 chr2 23005090 23005260 -227682594 + L1MCc LINE L1 26 200 -6223 763 256 66 36 chr2 23005944 23006374 -227681480 + L1MCc LINE L1 1129 1570 -4852 1051 245 109 85 chr2 23006652 23007344 -227680510 + L1MCc LINE L1 1864 2582 -4540 216 0 0 0 chr2 23007344 23007368 -227680486 + (CA)n Simple_repeat Simple_repeat 2 25 0 1051 245 109 85 chr2 23007368 23007524 -227680330 + L1MCc LINE L1 2582 2733 -4389 2327 135 3 6 chr2 23007526 23007888 -227679966 - MER46B DNA MER2_type 0 236 1 3589 269 74 15 chr2 23007963 23009638 -227678216 + L1MCc LINE L1 2747 4464 -2477 779 261 9 18 chr2 23009656 23009882 -227677972 - MIR SINE MIR -36 226 3 189 74 0 0 chr2 23011004 23011031 -227676823 + (TC)n Simple_repeat Simple_repeat 2 28 0 942 267 67 54 chr2 23011180 23011715 -227676139 + MER34 LTR ERV1 1 542 0 44106 30 23 2 chr2 23012475 23018085 -227669769 - L1P1 LINE L1 -424 5731 2 371 224 102 68 chr2 23019786 23019933 -227667921 + MER5A DNA MER1_type 1 152 -37 21 36 0 0 chr2 23020800 23020828 -227667026 + AT_rich Low_complexity Low_complexity 1 28 0 295 132 13 92 chr2 23020945 23021021 -227666833 - L2 LINE L2 0 3272 3203 1874 159 23 7 chr2 23021109 23021417 -227666437 - AluSq SINE Alu 0 313 1 1034 131 258 4 chr2 23021835 23022087 -227665767 + Charlie1 DNA MER1_type 2310 2625 -136 2019 110 7 7 chr2 23022176 23022488 -227665366 - AluY SINE Alu 0 312 1 1145 185 17 98 chr2 23023870 23024060 -227663794 - MER33 DNA MER1_type -2266 319 168 2262 136 0 0 chr2 23024060 23024370 -227663484 - AluSx SINE Alu -2 310 1 1145 185 17 98 chr2 23024370 23024525 -227663329 - MER33 DNA MER1_type -2417 168 2 181 391 25 6 chr2 23025681 23025842 -227662012 - L2 LINE L2 -194 3078 2915 2162 178 8 13 chr2 23028009 23028396 -227659458 - MLT1B LTR MaLR 0 390 6 209 229 107 71 chr2 23033854 23033921 -227653933 - MIR3 SINE MIR -37 171 108 2061 147 0 0 chr2 23033921 23034221 -227653633 + AluJo SINE Alu 2 301 -11 209 229 107 71 chr2 23034221 23034293 -227653561 - MIR3 SINE MIR -100 108 27 254 250 65 19 chr2 23039369 23039477 -227648377 - L1ME LINE L1 -279 6236 6124 194 374 130 0 chr2 23039503 23039618 -227648236 + MIR SINE MIR 14 143 -119 1019 186 0 0 chr2 23039632 23039793 -227648061 + FAM SINE Alu 9 169 -16 2454 83 0 0 chr2 23039798 23040099 -227647755 + AluSg SINE Alu 1 301 -9 7976 246 81 28 chr2 23040352 23042242 -227645612 + L1MEc LINE L1 42 1831 -4384 665 238 4 144 chr2 23042242 23042326 -227645528 + MER58A DNA MER1_type 4 98 -2322 2224 105 10 3 chr2 23042326 23042630 -227645224 + AluSq SINE Alu 1 306 -7 665 238 4 144 chr2 23042630 23042801 -227645053 + MER58A DNA MER1_type 98 223 -1 7976 246 81 28 chr2 23042801 23045281 -227642573 + L1MEc LINE L1 1831 4179 -2036 2333 103 0 0 chr2 23045281 23045581 -227642273 + AluSg SINE Alu 1 300 -10 7976 246 81 28 chr2 23045581 23046002 -227641852 + L1MEc LINE L1 4179 4576 -1639 2115 132 3 0 chr2 23046002 23046305 -227641549 + AluSx SINE Alu 1 304 -8 7976 246 81 28 chr2 23046305 23046505 -227641349 + L1MEc LINE L1 4576 5268 -947 303 308 68 34 chr2 23046663 23046929 -227640925 - L1ME LINE L1 -551 5964 5690 230 244 52 93 chr2 23046959 23047152 -227640702 - L1ME4a LINE L1 -132 5989 5805 207 0 0 0 chr2 23049213 23049236 -227638618 + (CTG)n Simple_repeat Simple_repeat 1 23 0 347 242 95 87 chr2 23049410 23049662 -227638192 + HAL1b LINE L1 80 333 -1015 622 121 61 96 chr2 23099707 23099905 -227587949 - AluY SINE Alu -117 194 4 2893 249 68 32 chr2 23099926 23101319 -227586535 - L1MEc LINE L1 -2739 3801 2399 383 211 18 165 chr2 23101338 23101379 -227586475 - MER58C DNA MER1_type -2207 213 168 2307 104 0 0 chr2 23101379 23101678 -227586176 + AluSc SINE Alu 1 299 -10 383 211 18 165 chr2 23101678 23101854 -227586000 - MER58C DNA MER1_type -2252 168 28 2397 128 13 10 chr2 23102241 23102631 -227585223 - L1PB3 LINE L1 -7 6147 5757 355 217 57 9 chr2 23102645 23102751 -227585103 - L1MEc LINE L1 -4578 1962 1852 1255 169 56 63 chr2 23102871 23102918 -227584936 + MLT1A1 LTR MaLR 49 95 -270 611 52 39 0 chr2 23102918 23102995 -227584859 + MADE1 DNA Mariner 1 80 0 1255 169 56 63 chr2 23102995 23103027 -227584827 + MLT1A1 LTR MaLR 95 126 -239 2148 98 3 17 chr2 23103027 23103350 -227584504 - AluSg SINE Alu 0 310 1 1255 169 56 63 chr2 23103350 23103588 -227584266 + MLT1A1 LTR MaLR 126 365 0 246 137 78 0 chr2 23103590 23103641 -227584213 + MER110 LTR ERV1 415 469 -22 235 233 19 19 chr2 23105299 23105402 -227582452 + (CCG)n Simple_repeat Simple_repeat 2 104 0 * 236 231 25 41 chr2 23105354 23105475 -227582379 + (CCCCAG)n Simple_repeat Simple_repeat 6 124 0 189 0 0 0 chr2 23105521 23105542 -227582312 + (CCG)n Simple_repeat Simple_repeat 2 22 0 275 225 14 0 chr2 23105635 23105706 -227582148 + GA-rich Low_complexity Low_complexity 1 72 0 217 206 64 50 chr2 23105819 23105960 -227581894 + (CCGGG)n Simple_repeat Simple_repeat 2 144 0 21 0 0 0 chr2 23106194 23106215 -227581639 + GC_rich Low_complexity Low_complexity 1 21 0 207 156 0 0 chr2 23107106 23107138 -227580716 + (CCG)n Simple_repeat Simple_repeat 3 34 0 22 0 0 0 chr2 23107172 23107194 -227580660 + GC_rich Low_complexity Low_complexity 1 22 0 1035 184 24 107 chr2 23107707 23108044 -227579810 + MLT1A1 LTR MaLR 56 364 -1 1819 178 28 6 chr2 23108044 23108404 -227579450 + L1MA7 LINE L1 5923 6290 -1 2376 63 3 0 chr2 23108819 23109103 -227578751 - AluY SINE Alu -14 297 13 478 120 0 13 chr2 23109968 23110043 -227577811 + MER46A DNA MER2_type 97 170 -66 1224 150 5 5 chr2 23110956 23111149 -227576705 - LTR40a LTR ERVL -3 516 324 628 318 17 0 chr2 23111805 23111984 -227575870 - MIR SINE MIR -75 187 6 265 263 88 26 chr2 23111975 23112089 -227575765 + L3 LINE CR1 1298 1418 -159 * 369 0 0 0 chr2 23113514 23113555 -227574299 + (TG)n Simple_repeat Simple_repeat 2 42 0 490 214 183 0 chr2 23113881 23114012 -227573842 - MER5A DNA MER1_type -4 185 31 182 237 85 17 chr2 23114969 23115028 -227572826 - L2 LINE L2 -4 3309 3247 302 246 119 0 chr2 23115385 23115503 -227572351 + MIR SINE MIR 117 248 -14 2087 122 18 33 chr2 23115512 23115847 -227572007 + L1M2 LINE L1 5469 5798 -493 273 119 0 0 chr2 23117233 23117275 -227570579 + (T)n Simple_repeat Simple_repeat 1 42 0 570 153 71 0 chr2 23117867 23117965 -227569889 + AluJb SINE Alu 190 294 -18 273 233 0 0 chr2 23118769 23118859 -227568995 + (TA)n Simple_repeat Simple_repeat 2 91 0 2499 174 54 14 chr2 23118894 23118916 -227568938 - L1MB2 LINE L1 -28 6143 6123 2308 89 0 7 chr2 23118916 23119209 -227568645 - AluSx SINE Alu -11 301 11 2499 174 54 14 chr2 23119209 23119686 -227568168 - L1MB2 LINE L1 -48 6123 5624 2055 111 3 39 chr2 23119697 23120004 -227567850 - AluSp SINE Alu -17 296 1 455 283 90 6 chr2 23120208 23120374 -227567480 + MIR SINE MIR 9 188 -74 493 247 84 26 chr2 23120803 23120993 -227566861 - MIR SINE MIR -41 221 21 684 289 16 43 chr2 23122670 23122974 -227564880 + HAL1b LINE L1 352 647 -701 1659 200 114 47 chr2 23123027 23123476 -227564378 + MLT2B1 LTR ERVL 1 479 -41 1021 168 12 0 chr2 23123514 23123681 -227564173 + MER6B DNA MER2_type 1 169 -41 21 0 0 0 chr2 23123747 23123768 -227564086 + AT_rich Low_complexity Low_complexity 1 21 0 1269 233 128 49 chr2 23123903 23126115 -227561739 - L1ME2 LINE L1 -1 6163 3665 1370 242 132 19 chr2 23126121 23126766 -227561088 - L1ME2 LINE L1 -2954 3192 2475 2960 235 63 24 chr2 23126796 23127331 -227560523 - L1ME1 LINE L1 -5 6230 5718 2169 35 0 8 chr2 23127331 23127587 -227560267 - AluY SINE Alu -57 254 1 2960 235 63 24 chr2 23127587 23128683 -227559171 - L1ME1 LINE L1 -517 5718 4524 296 312 11 0 chr2 23128689 23128782 -227559072 - L1ME1 LINE L1 -2054 4161 4068 * 3122 228 44 48 chr2 23128779 23128906 -227558948 - L1ME1 LINE L1 -2953 3262 3136 808 284 62 0 chr2 23128906 23129117 -227558737 - MER58A DNA MER1_type 0 224 1 3122 228 44 48 chr2 23129117 23130631 -227557223 - L1ME1 LINE L1 -3079 3136 1450 376 331 89 28 chr2 23130851 23131225 -227556629 - L1MEc LINE L1 -4406 1675 882 229 226 157 10 chr2 23131242 23131344 -227556510 - L1M3de LINE L1 -4700 1953 1837 306 0 0 0 chr2 23131346 23131380 -227556474 + (TTTC)n Simple_repeat Simple_repeat 2 35 0 489 308 67 73 chr2 23131380 23131506 -227556348 - L1MEc LINE L1 -5169 940 815 1529 186 0 20 chr2 23131506 23131802 -227556052 - AluJo SINE Alu -22 290 1 489 308 67 73 chr2 23131802 23132272 -227555582 - L1MEc LINE L1 -5294 815 461 482 313 28 53 chr2 23132467 23132863 -227554991 - L1MEc LINE L1 -5683 387 2 207 338 0 0 chr2 23133221 23133295 -227554559 + MIR3 SINE MIR 81 154 -54 979 265 105 47 chr2 23133844 23134312 -227553542 + LTR33A LTR ERVL 23 517 -6 542 237 44 44 chr2 23134422 23134557 -227553297 - L2 LINE L2 0 3272 3138 391 272 8 32 chr2 23134608 23134733 -227553121 + MIR SINE MIR 26 147 -115 251 283 57 47 chr2 23135103 23135209 -227552645 + L2 LINE L2 2994 3100 -172 405 70 0 0 chr2 23135223 23135280 -227552574 + (CAT)n Simple_repeat Simple_repeat 1 57 0 330 45 0 0 chr2 23135440 23135484 -227552370 + (TG)n Simple_repeat Simple_repeat 2 45 0 414 325 78 6 chr2 23136055 23136221 -227551633 - MIR3 SINE MIR -1 207 30 1978 112 31 17 chr2 23137335 23137629 -227550225 + AluSx SINE Alu 1 298 -14 594 204 35 114 chr2 23139139 23139428 -227548426 - L1MEc LINE L1 -5135 1261 996 500 323 26 5 chr2 23139443 23139638 -227548216 - MER58C DNA MER1_type 0 215 17 2243 233 79 79 chr2 23139656 23139742 -227548112 - L1MEc LINE L1 -5421 975 890 300 27 0 0 chr2 23139742 23139779 -227548075 + (ATTG)n Simple_repeat Simple_repeat 2 38 0 2243 233 79 79 chr2 23139779 23140646 -227547208 - L1MEc LINE L1 -5505 891 22 1549 109 0 0 chr2 23140827 23141038 -227546816 - AluSg/x SINE Alu -10 302 92 1025 273 93 14 chr2 23142236 23142591 -227545263 - LTR16B LTR ERVL -8 456 74 1317 176 9 45 chr2 23143102 23143369 -227544485 + MLT1A1 LTR MaLR 1 301 -64 2157 112 16 0 chr2 23143369 23143674 -227544180 - AluSx SINE Alu -2 310 1 1317 176 9 45 chr2 23143674 23143737 -227544117 + MLT1A1 LTR MaLR 301 365 0 237 381 0 0 chr2 23144397 23144481 -227543373 - L2 LINE L2 -1 3271 3188 243 203 0 0 chr2 23144582 23144646 -227543208 + A-rich Low_complexity Low_complexity 1 64 0 403 200 0 0 chr2 23144714 23144789 -227543065 - MER45C DNA AcHobo 0 953 879 366 279 19 0 chr2 23144825 23144929 -227542925 - LTR16B LTR ERVL -196 268 163 309 274 14 0 chr2 23144931 23145004 -227542850 - MER45C DNA AcHobo -190 763 690 263 219 62 0 chr2 23145106 23145170 -227542684 - MER45C DNA AcHobo -775 178 111 273 178 0 0 chr2 23145171 23145216 -227542638 + Alu SINE Alu 1 45 -255 695 326 102 49 chr2 23145246 23146043 -227541811 - L2 LINE L2 -211 3061 2211 1384 162 64 24 chr2 23146045 23146341 -227541513 + MLT1C LTR MaLR 1 308 -159 186 233 183 17 chr2 23147055 23147115 -227540739 - L2 LINE L2 -2 3270 3201 712 245 172 45 chr2 23147332 23147728 -227540126 + MLT1J2 LTR MaLR 5 450 0 2294 81 7 0 chr2 23148603 23148910 -227538944 + AluY SINE Alu 1 309 -2 2189 106 0 6 chr2 23149474 23149785 -227538069 + AluSg SINE Alu 1 309 -1 504 288 23 23 chr2 23150211 23150388 -227537466 + MLT1L LTR MaLR 112 288 -327 344 258 97 32 chr2 23150470 23150625 -227537229 + MLT1L LTR MaLR 445 609 -6 1996 118 14 0 chr2 23151122 23151409 -227536445 + AluSx SINE Alu 1 291 -21 878 290 9 0 chr2 23151420 23151641 -227536213 - MIR SINE MIR 0 262 40 2398 55 0 0 chr2 23151905 23152196 -227535658 + L1P LINE L1 4515 4805 -1341 241 196 0 20 chr2 23152196 23152247 -227535607 + MLT1G1 LTR MaLR 546 595 0 459 0 0 0 chr2 23153522 23153573 -227534281 + (CA)n Simple_repeat Simple_repeat 2 52 0 201 314 69 39 chr2 23153602 23153704 -227534150 - L2 LINE L2 -10 3262 3158 240 163 0 0 chr2 23153935 23153978 -227533876 + GA-rich Low_complexity Low_complexity 2 44 0 2601 36 0 0 chr2 23155509 23155815 -227532039 - AluY SINE Alu -5 306 1 1571 188 3 20 chr2 23155924 23156222 -227531632 - AluJo SINE Alu -18 294 2 507 233 157 56 chr2 23157082 23157439 -227530415 + L2 LINE L2 2921 3313 0 381 329 67 50 chr2 23157521 23157804 -227530050 + L1ME4a LINE L1 5725 6012 -109 301 127 67 149 chr2 23157826 23157931 -227529923 + L1ME4a LINE L1 5999 6092 -29 2456 32 0 32 chr2 23157931 23158243 -227529611 - AluY SINE Alu -9 302 1 301 127 67 149 chr2 23158243 23158271 -227529583 + L1ME4a LINE L1 6092 6121 0 368 279 23 0 chr2 23158975 23159061 -227528793 + MIR3 SINE MIR 87 174 -34 239 342 33 8 chr2 23159116 23159236 -227528618 - L2 LINE L2 -158 3114 2992 672 277 21 16 chr2 23159555 23159743 -227528111 + MER5A DNA MER1_type 1 189 0 534 260 152 7 chr2 23159746 23159939 -227527915 + MIR SINE MIR 10 223 -39 25 31 0 0 chr2 23159942 23159974 -227527880 + AT_rich Low_complexity Low_complexity 1 32 0 2255 106 0 3 chr2 23160071 23160383 -227527471 - AluSx SINE Alu -1 311 1 252 378 0 27 chr2 23160785 23160896 -227526958 - MIR3 SINE MIR -52 156 49 297 358 74 35 chr2 23163127 23163384 -227524470 + L3 LINE CR1 1064 1330 -247 277 213 50 25 chr2 23165864 23165944 -227521910 + MIR SINE MIR 178 259 -3 284 272 141 0 chr2 23166303 23166395 -227521459 + MER5C DNA MER1_type 3 107 -217 2241 107 0 0 chr2 23166404 23166714 -227521140 + AluSg SINE Alu 1 310 0 244 206 0 48 chr2 23166874 23166937 -227520917 + MER5C DNA MER1_type 251 310 -14 4560 155 31 11 chr2 23168698 23169500 -227518354 + L1MB3 LINE L1 5284 6101 -82 606 140 0 0 chr2 23170259 23170359 -227517495 + L1MB3 LINE L1 6083 6182 -1 22 0 0 0 chr2 23170501 23170523 -227517331 + AT_rich Low_complexity Low_complexity 1 22 0 940 271 88 6 chr2 23170545 23170910 -227516944 - L1ME2 LINE L1 -26 6138 5744 1215 195 24 42 chr2 23171486 23171773 -227516081 + AluJo SINE Alu 1 282 -30 315 193 29 14 chr2 23173784 23173924 -227513930 + (TA)n Simple_repeat Simple_repeat 1 142 0 228 173 77 19 chr2 23173994 23174046 -227513808 + L1ME4a LINE L1 5960 6014 -107 351 0 0 0 chr2 23174664 23174703 -227513151 + (TG)n Simple_repeat Simple_repeat 1 39 0 306 253 32 50 chr2 23175880 23176073 -227511781 - L2 LINE L2 -1 3312 3091 268 260 0 14 chr2 23176762 23176835 -227511019 - L2 LINE L2 -208 3064 2993 2242 104 3 0 chr2 23176984 23177291 -227510563 + AluSx SINE Alu 1 308 -4 258 307 47 40 chr2 23177600 23177750 -227510104 + MIR SINE MIR 66 216 -46 310 190 300 20 chr2 23177790 23177890 -227509964 - L1ME4a LINE L1 -5 6116 5989 260 222 61 20 chr2 23177897 23177996 -227509858 - L1ME4a LINE L1 -179 5942 5840 1576 226 27 27 chr2 23178105 23178472 -227509382 - LTR40a LTR ERVL -152 367 1 818 255 61 9 chr2 23179500 23179712 -227508142 - MIR SINE MIR -6 256 34 22 0 0 0 chr2 23180004 23180026 -227507828 + AT_rich Low_complexity Low_complexity 1 22 0 2016 100 21 7 chr2 23180028 23180319 -227507535 + AluSx SINE Alu 13 307 -5 210 154 0 0 chr2 23181617 23181656 -227506198 + A-rich Low_complexity Low_complexity 1 39 0 449 196 74 16 chr2 23182630 23182760 -227505094 - MLT1I LTR MaLR -3 536 286 182 305 17 17 chr2 23183182 23183241 -227504613 - L3 LINE CR1 -8 1569 1511 389 327 111 0 chr2 23183305 23183522 -227504332 - L3 LINE CR1 -273 1304 1064 798 312 94 18 chr2 23183612 23184058 -227503796 - L2 LINE L2 0 3313 2834 220 329 13 0 chr2 23184221 23184297 -227503557 - L3 LINE CR1 -737 840 764 1745 184 27 3 chr2 23185649 23185980 -227501874 - MER44D DNA MER2_type 0 609 1 1400 192 22 11 chr2 23186017 23186288 -227501566 + AluJb SINE Alu 20 293 -19 236 214 294 46 chr2 23186983 23187139 -227500715 - MIR SINE MIR -33 175 18 204 179 0 0 chr2 23189510 23189549 -227498305 + GA-rich Low_complexity Low_complexity 4 42 0 1860 151 46 27 chr2 23189667 23189732 -227498122 - L1MB8 LINE L1 -2 6176 6114 2136 109 3 0 chr2 23189732 23190035 -227497819 + AluSp SINE Alu 1 304 -9 1860 151 46 27 chr2 23190035 23190340 -227497514 - L1MB8 LINE L1 -64 6114 5799 594 112 0 0 chr2 23190356 23190445 -227497409 - AluSc SINE Alu -6 303 215 433 142 36 24 chr2 23190447 23190567 -227497287 - L1MB8 LINE L1 -399 5779 5659 1239 84 0 24 chr2 23190659 23190826 -227497028 - AluSc SINE Alu -77 232 70 1011 356 87 25 chr2 23190826 23191834 -227496020 - L2 LINE L2 -65 3248 2174 318 308 61 57 chr2 23192092 23192371 -227495483 - L2 LINE L2 -179 3134 2855 285 159 0 0 chr2 23192588 23192632 -227495222 + Alu SINE Alu 246 289 -13 23 33 0 0 chr2 23192802 23192832 -227495022 + AT_rich Low_complexity Low_complexity 1 30 0 2245 109 0 3 chr2 23192910 23193221 -227494633 + AluSg SINE Alu 1 310 0 189 121 0 0 chr2 23193255 23193288 -227494566 + (CAT)n Simple_repeat Simple_repeat 3 35 0 399 339 27 43 chr2 23194743 23195000 -227492854 + L1M4 LINE L1 3169 3421 -2725 2279 43 40 7 chr2 23195000 23195300 -227492554 + AluY SINE Alu 1 310 -1 821 160 0 0 chr2 23195352 23195483 -227492371 - FLAM_C SINE Alu -10 133 3 1202 268 136 14 chr2 23195509 23196010 -227491844 + L1ME3A LINE L1 5587 6148 -22 1820 131 7 0 chr2 23196043 23196369 -227491485 + AluSx SINE Alu 1 328 0 559 200 59 0 chr2 23197377 23197512 -227490342 + L1MB7 LINE L1 6042 6184 0 194 298 107 46 chr2 23197912 23198043 -227489811 + L2 LINE L2 3104 3242 -30 186 283 22 0 chr2 23198058 23198104 -227489750 + L2 LINE L2 3214 3260 -12 180 77 0 0 chr2 23198488 23198514 -227489340 + (CAGCC)n Simple_repeat Simple_repeat 3 28 0 468 289 100 28 chr2 23199165 23199345 -227488509 + MIR SINE MIR 1 193 -69 2105 194 94 26 chr2 23199366 23199834 -227488020 + MLT1D LTR MaLR 1 500 -5 1022 329 141 55 chr2 23199990 23201338 -227486516 - L3 LINE CR1 -112 1465 2 193 250 0 88 chr2 23201514 23201582 -227486272 + MER5A DNA MER1_type 30 91 -98 920 263 93 35 chr2 23201597 23201973 -227485881 - MLT1J1 LTR MaLR -2 444 47 270 183 141 0 chr2 23201989 23202060 -227485794 - MLT1J1 LTR MaLR -352 94 14 235 316 127 0 chr2 23202070 23202149 -227485705 - MER5A DNA MER1_type -100 89 1 416 303 83 78 chr2 23202227 23202613 -227485241 + L2 LINE L2 2864 3251 -21 487 223 39 0 chr2 23203081 23203184 -227484670 + MLT1F1 LTR MaLR 1 107 -435 1297 221 52 22 chr2 23203203 23203544 -227484310 + MLT1F1 LTR MaLR 224 567 0 33 80 0 0 chr2 23203756 23203831 -227484023 + AT_rich Low_complexity Low_complexity 1 75 0 1757 144 34 0 chr2 23204103 23204395 -227483459 + AluSx SINE Alu 2 303 -9 201 39 0 0 chr2 23205780 23205806 -227482048 + (G)n Simple_repeat Simple_repeat 1 26 0 1891 125 7 17 chr2 23206302 23206598 -227481256 + AluSx SINE Alu 1 293 -19 227 186 17 34 chr2 23207580 23207639 -227480215 + L2 LINE L2 3212 3269 -3 187 286 0 0 chr2 23207739 23207788 -227480066 + L2 LINE L2 3263 3311 -2 520 249 157 40 chr2 23208208 23208423 -227479431 + MIR SINE MIR 10 251 -11 22 0 0 0 chr2 23210161 23210183 -227477671 + AT_rich Low_complexity Low_complexity 1 22 0 27 73 0 0 chr2 23211230 23211285 -227476569 + GC_rich Low_complexity Low_complexity 1 55 0 321 131 0 0 chr2 23212690 23212751 -227475103 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 335 298 161 19 chr2 23213621 23213782 -227474072 - MIR3 SINE MIR -6 202 19 188 327 44 26 chr2 23214600 23214713 -227473141 + L2 LINE L2 3142 3256 -16 201 94 0 0 chr2 23216266 23216298 -227471556 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 269 208 15 154 chr2 23217516 23217646 -227470208 + MER103 DNA DNA 3 114 -52 282 339 123 0 chr2 23217917 23218047 -227469807 + L2 LINE L2 3127 3272 0 1855 251 101 15 chr2 23218903 23219517 -227468337 + HsTC2a DNA Tc2 78 744 0 437 322 33 115 chr2 23223258 23223683 -227464171 + L2 LINE L2 2881 3270 -2 242 253 23 58 chr2 23223811 23223898 -227463956 + L2 LINE L2 3004 3087 -185 201 335 90 48 chr2 23224444 23224611 -227463243 + L2 LINE L2 3083 3256 -16 204 158 0 0 chr2 23224649 23224687 -227463167 + A-rich Low_complexity Low_complexity 3 40 0 2260 140 60 3 chr2 23225895 23226259 -227461595 - MLT1B LTR MaLR 0 390 6 225 303 99 46 chr2 23226621 23226773 -227461081 + MIR SINE MIR 95 254 -8 417 330 115 10 chr2 23227310 23227519 -227460335 - MIR SINE MIR -1 261 31 872 258 99 40 chr2 23227608 23227910 -227459944 + L1ME3 LINE L1 5795 6114 -48 205 379 66 71 chr2 23229850 23230288 -227457566 - L2 LINE L2 0 3272 2837 408 167 18 53 chr2 23230796 23230910 -227456944 + Charlie7 DNA MER1_type 28 137 -2475 463 266 158 59 chr2 23231033 23231337 -227456517 + L1MDa LINE L1 1736 2069 -4471 399 259 28 52 chr2 23231777 23231989 -227455865 + L1MDa LINE L1 2850 3056 -3484 2178 115 86 9 chr2 23232101 23232439 -227455415 - THE1B LTR MaLR 0 364 1 218 325 113 25 chr2 23232842 23232922 -227454932 + L2 LINE L2 3169 3255 -17 2081 175 16 10 chr2 23234410 23234798 -227453056 + MLT1B LTR MaLR 1 390 0 207 256 141 0 chr2 23235544 23235622 -227452232 - MIR SINE MIR -5 257 169 784 271 48 31 chr2 23235631 23235830 -227452024 + L1ME3A LINE L1 5418 5625 -545 2707 80 16 16 chr2 23235830 23236205 -227451649 - THE1C LTR MaLR 0 375 1 784 271 48 31 chr2 23236205 23236297 -227451557 + L1ME3A LINE L1 5625 5714 -456 1153 228 39 50 chr2 23236319 23236683 -227451171 + L1ME3A LINE L1 5811 6170 0 250 329 200 0 chr2 23236687 23236827 -227451027 - MIR SINE MIR -89 173 6 197 309 181 0 chr2 23237561 23237655 -227450199 + MIR SINE MIR 152 262 0 417 257 136 58 chr2 23239169 23239515 -227448339 - HAL1 LINE L1 -2 2505 2133 376 275 45 79 chr2 23239783 23239961 -227447893 - HAL1 LINE L1 -2317 190 19 643 281 43 5 chr2 23240294 23240579 -227447275 + HERVL LTR ERVL 1711 1854 -3142 385 351 19 40 chr2 23240611 23240770 -227447084 + HERVL LTR ERVL 3213 3374 -2280 2287 93 3 0 chr2 23240770 23241060 -227446794 + AluSc SINE Alu 1 291 -18 385 351 19 40 chr2 23241060 23241321 -227446533 + HERVL LTR ERVL 3374 3624 -2030 514 306 179 21 chr2 23242246 23242631 -227445223 + MLT1J2 LTR MaLR 5 450 0 494 338 86 13 chr2 23244759 23244993 -227442861 + MLT1J2 LTR MaLR 200 450 0 1221 223 81 17 chr2 23245824 23246170 -227441684 + MER110A LTR ERV1 69 436 -32 266 178 0 0 chr2 23246169 23246214 -227441640 + MLT1A2 LTR MaLR 5 49 -325 * 231 354 65 14 chr2 23247448 23247739 -227440115 - L2 LINE L2 -1020 2294 1989 186 278 74 0 chr2 23249889 23249943 -227437911 + L2 LINE L2 3209 3266 -6 233 353 30 0 chr2 23250001 23250134 -227437720 + L2 LINE L2 2637 2773 -541 713 262 21 5 chr2 23250554 23250745 -227437109 + MIR SINE MIR 29 222 -40 692 204 0 30 chr2 23250784 23250916 -227436938 + AluJb SINE Alu 165 292 -20 234 0 0 0 chr2 23250925 23250951 -227436903 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 402 115 0 0 chr2 23250970 23251031 -227436823 + (GGAA)n Simple_repeat Simple_repeat 3 63 0 858 83 0 0 chr2 23251133 23251253 -227436601 + (GGAA)n Simple_repeat Simple_repeat 4 123 0 246 357 51 0 chr2 23251259 23251357 -227436497 - MIR SINE MIR -71 137 35 2228 134 0 3 chr2 23252677 23252990 -227434864 + AluSx SINE Alu 1 312 0 286 218 0 103 chr2 23256942 23257029 -227430825 + L2 LINE L2 3193 3270 -2 437 239 92 37 chr2 23257082 23257245 -227430609 - MLT1J2 LTR MaLR 0 450 279 198 0 0 0 chr2 23258012 23258034 -227429820 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 225 279 29 0 chr2 23258674 23258742 -227429112 - L1ME LINE L1 -437 5684 5615 567 307 127 27 chr2 23258745 23259361 -227428493 - L1ME LINE L1 -639 5539 4853 715 99 54 9 chr2 23259375 23259508 -227428346 - AluSp/q SINE Alu 0 313 174 657 289 59 122 chr2 23259538 23260127 -227427727 - L1ME LINE L1 -1316 4830 4279 573 329 133 40 chr2 23261113 23262074 -227425780 - L2 LINE L2 0 3272 2215 304 202 83 60 chr2 23262520 23262604 -227425250 - L2 LINE L2 -2 3270 3185 414 0 0 0 chr2 23262850 23262896 -227424958 + (TG)n Simple_repeat Simple_repeat 1 46 0 504 266 90 17 chr2 23265527 23265704 -227422150 + L3b LINE CR1 1152 1341 -242 793 228 35 5 chr2 23266334 23266536 -227421318 - LTR67 LTR ERVL -2 555 348 258 315 14 0 chr2 23267010 23267083 -227420771 + MIR SINE MIR 20 93 -169 1079 186 0 16 chr2 23267170 23267358 -227420496 - AluJb SINE Alu -13 299 115 183 244 0 24 chr2 23267869 23267910 -227419944 + MIR SINE MIR 112 151 -111 * 268 187 40 80 chr2 23267896 23267971 -227419883 - MIR SINE MIR -95 113 42 305 321 108 35 chr2 23268307 23268740 -227419114 + L2 LINE L2 2227 2691 -623 390 379 11 6 chr2 23268965 23269139 -227418715 - MIR SINE MIR -75 187 13 578 247 100 24 chr2 23269412 23269582 -227418272 + L2 LINE L2 3090 3272 0 389 293 110 30 chr2 23270175 23270339 -227417515 + MIR SINE MIR 79 255 -7 191 300 25 12 chr2 23271360 23271440 -227416414 + MIR SINE MIR 59 139 -69 393 281 22 43 chr2 23272445 23272584 -227415270 - MIR SINE MIR -35 227 92 591 173 11 6 chr2 23272995 23273174 -227414680 + (TG)n Simple_repeat Simple_repeat 1 180 0 332 215 9 0 chr2 23273187 23273294 -227414560 + (TG)n Simple_repeat Simple_repeat 2 109 0 250 229 5 5 chr2 23273320 23273547 -227414307 + (TG)n Simple_repeat Simple_repeat 1 227 0 447 196 11 6 chr2 23273561 23273740 -227414114 + (TG)n Simple_repeat Simple_repeat 1 180 0 388 195 29 0 chr2 23273805 23273979 -227413875 + (TG)n Simple_repeat Simple_repeat 2 180 0 422 193 23 0 chr2 23273991 23274162 -227413692 + (TG)n Simple_repeat Simple_repeat 2 176 0 299 132 15 0 chr2 23274207 23274275 -227413579 + (TG)n Simple_repeat Simple_repeat 1 69 0 17407 28 1 1 chr2 23275873 23278045 -227409809 - L1P LINE L1 -1658 4488 2315 7671 30 0 0 chr2 23278045 23279404 -227408450 + L1PA3 LINE L1 4811 6169 0 1150 225 103 48 chr2 23279422 23279821 -227408033 - MLT1G1 LTR MaLR -37 558 95 2516 185 18 35 chr2 23279821 23279993 -227407861 + MLT1D LTR MaLR 1 174 -331 1623 168 34 30 chr2 23279993 23280290 -227407564 - AluJb SINE Alu -14 298 1 2516 185 18 35 chr2 23280290 23280631 -227407223 + MLT1D LTR MaLR 174 505 0 1150 225 103 48 chr2 23280631 23280707 -227407147 - MLT1G1 LTR MaLR -500 95 25 1404 275 124 46 chr2 23280966 23282232 -227405622 - L1MC4 LINE L1 0 8042 6877 2141 100 24 7 chr2 23282232 23282522 -227405332 - AluSq SINE Alu -17 296 2 1404 275 124 46 chr2 23282522 23282862 -227404992 - L1MC4 LINE L1 -1165 6877 6565 1116 156 40 10 chr2 23282862 23283061 -227404793 - MER6B DNA MER2_type -1 209 5 1404 275 124 46 chr2 23283061 23283877 -227403977 - L1MC4 LINE L1 -1477 6565 5255 434 318 118 47 chr2 23283883 23284264 -227403590 - L1MC4 LINE L1 -944 5202 4795 884 221 99 1 chr2 23285575 23285857 -227401997 + MER46C DNA MER2_type 2 338 0 490 287 45 6 chr2 23286164 23286321 -227401533 - MIR SINE MIR 0 262 100 228 254 94 14 chr2 23286346 23286484 -227401370 - LTR67 LTR ERVL -29 528 380 204 309 75 21 chr2 23286908 23287002 -227400852 - MIR SINE MIR -87 121 23 638 269 138 24 chr2 23287239 23287529 -227400325 - MLT1H LTR MaLR -16 533 211 1331 156 3 122 chr2 23288626 23288998 -227398856 - L1MB8 LINE L1 -6 6172 5844 600 240 73 82 chr2 23289001 23289234 -227398620 + MIR SINE MIR 31 261 -1 1276 135 50 0 chr2 23289682 23289904 -227397950 - MSTB LTR MaLR 0 426 194 1384 220 3 33 chr2 23289907 23290211 -227397643 - AluJo SINE Alu -12 300 6 998 138 46 0 chr2 23290219 23290393 -227397461 - MSTB LTR MaLR -244 182 1 221 373 15 0 chr2 23290910 23290977 -227396877 + L2 LINE L2 3123 3190 -82 23 54 0 0 chr2 23291000 23291037 -227396817 + AT_rich Low_complexity Low_complexity 1 37 0 233 340 47 19 chr2 23292701 23292807 -227395047 - L2 LINE L2 -5 3308 3200 1073 80 0 0 chr2 23293500 23293637 -227394217 - AluSg/x SINE Alu -6 304 168 2004 151 84 35 chr2 23293690 23294061 -227393793 + MLT1B LTR MaLR 2 390 0 2609 68 0 0 chr2 23295623 23295932 -227391922 + AluY SINE Alu 1 309 -2 1262 291 148 55 chr2 23296111 23296178 -227391676 - L2 LINE L2 -2 3311 3252 889 195 133 0 chr2 23296178 23296373 -227391481 - MER58A DNA MER1_type -3 221 1 1262 291 148 55 chr2 23296373 23297504 -227390350 - L2 LINE L2 -61 3252 1990 662 239 116 61 chr2 23297648 23297941 -227389913 - L2 LINE L2 -1324 1990 1682 336 336 35 17 chr2 23298084 23298200 -227389654 - L2 LINE L2 -1 3271 3154 807 149 29 120 chr2 23298211 23298419 -227389435 + MER20 DNA MER1_type 1 189 -30 234 337 102 10 chr2 23298859 23298957 -227388897 - L2 LINE L2 -528 2786 2680 768 306 37 0 chr2 23298969 23299185 -227388669 - MIR SINE MIR 0 262 39 488 71 12 60 chr2 23299833 23299917 -227387937 + MADE1 DNA Mariner 1 80 0 352 161 12 49 chr2 23300426 23300507 -227387347 + MIR3 SINE MIR 111 188 -20 1008 129 0 0 chr2 23300746 23300886 -227386968 + FLAM_C SINE Alu 3 142 -1 695 252 110 13 chr2 23302186 23302504 -227385350 + LTR16C LTR ERVL 120 468 -23 871 279 68 6 chr2 23303292 23303614 -227384240 + LTR16C LTR ERVL 150 491 0 345 280 40 16 chr2 23304832 23304957 -227382897 + MIR3 SINE MIR 10 137 -71 409 319 49 58 chr2 23305945 23306171 -227381683 - MIR SINE MIR -30 232 9 194 148 0 0 chr2 23307628 23307655 -227380199 - L2 LINE L2 -20 3252 3226 463 313 20 22 chr2 23308247 23308445 -227379409 + MIR SINE MIR 3 198 -62 2061 97 0 4 chr2 23310267 23310550 -227377304 + AluSc SINE Alu 23 304 0 578 138 0 0 chr2 23310551 23310660 -227377194 - L1PA12 LINE L1 -4449 3135 3019 328 320 39 10 chr2 23310662 23310765 -227377089 - MIR SINE MIR -141 121 16 755 244 107 90 chr2 23310776 23311288 -227376566 - LTR33 LTR ERVL 0 521 1 1184 231 126 38 chr2 23311651 23312153 -227375701 + L2 LINE L2 2780 3301 -12 189 0 0 0 chr2 23312154 23312175 -227375679 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 27 29 0 0 chr2 23312884 23312918 -227374936 + AT_rich Low_complexity Low_complexity 1 34 0 201 74 0 0 chr2 23313375 23313402 -227374452 + (A)n Simple_repeat Simple_repeat 1 27 0 1552 163 20 0 chr2 23313810 23314062 -227373792 - AluSx SINE Alu -51 261 5 473 327 125 9 chr2 23314222 23314647 -227373207 - L1ME4a LINE L1 -11 6110 5637 191 324 39 56 chr2 23317467 23317646 -227370208 + L2 LINE L2 2232 2407 -907 339 208 160 24 chr2 23317847 23317972 -227369882 + MIR3 SINE MIR 4 145 -63 186 246 154 108 chr2 23318040 23318098 -227369756 + MER5B DNA MER1_type 1 55 -123 2208 113 0 10 chr2 23318098 23318400 -227369454 + AluSx SINE Alu 3 301 -11 186 246 154 108 chr2 23318400 23318471 -227369383 + MER5B DNA MER1_type 55 136 -42 691 219 16 44 chr2 23318935 23319118 -227368736 + MER5B DNA MER1_type 1 178 0 2019 125 45 3 chr2 23319525 23319813 -227368041 + AluSx SINE Alu 1 300 -12 212 229 0 0 chr2 23320376 23320411 -227367443 + MER91 DNA MER1_type 130 164 -26 426 39 0 0 chr2 23320714 23320766 -227367088 + (TTCA)n Simple_repeat Simple_repeat 4 55 0 237 267 89 11 chr2 23320789 23320879 -227366975 - L2 LINE L2 -47 3225 3129 390 280 72 16 chr2 23320969 23321094 -227366760 - L2 LINE L2 0 3313 3182 479 276 14 60 chr2 23321580 23321729 -227366125 - MIR SINE MIR -60 148 32 284 237 175 26 chr2 23323122 23323236 -227364618 + L2 LINE L2 3142 3272 0 890 237 63 5 chr2 23323589 23323796 -227364058 + MIR SINE MIR 13 231 -31 322 305 0 30 chr2 23324255 23324386 -227363468 + MIR3 SINE MIR 60 186 -22 568 332 50 9 chr2 23324785 23325005 -227362849 - MIR SINE MIR -19 243 15 201 175 25 0 chr2 23326685 23326725 -227361129 - MER5B DNA MER1_type 0 178 138 669 228 102 0 chr2 23327219 23327386 -227360468 - L3b LINE CR1 -117 1466 1283 1428 108 0 0 chr2 23328848 23329042 -227358812 - L1PA8 LINE L1 -4 6168 5975 190 264 204 34 chr2 23329678 23329947 -227357907 + L2 LINE L2 2353 2667 -647 384 275 44 93 chr2 23330788 23330970 -227356884 + MIR3 SINE MIR 18 190 -18 456 175 0 0 chr2 23331524 23331621 -227356233 + (TG)n Simple_repeat Simple_repeat 1 97 0 583 237 0 30 chr2 23332943 23333078 -227354776 - FLAM_C SINE Alu -1 132 2 766 201 35 0 chr2 23335872 23336046 -227351808 - L1MA9 LINE L1 -47 6265 6086 643 204 162 0 chr2 23336541 23336708 -227351146 + MER3 DNA MER1_type 15 208 -1 248 222 19 0 chr2 23336667 23336721 -227351133 - MER3 DNA MER1_type -119 90 36 * 242 302 104 0 chr2 23337914 23338010 -227349844 - L2 LINE L2 -15 3298 3193 695 250 17 56 chr2 23339631 23339863 -227347991 - L1ME2 LINE L1 -16 6148 5926 463 253 55 7 chr2 23341133 23341279 -227346575 + MIR3 SINE MIR 56 208 0 29 28 0 0 chr2 23342097 23342133 -227345721 + AT_rich Low_complexity Low_complexity 1 36 0 459 254 56 7 chr2 23345635 23345777 -227342077 + MIR3 SINE MIR 60 208 0 880 229 147 7 chr2 23346055 23346496 -227341358 - MLT1G LTR MaLR 0 530 32 786 214 46 25 chr2 23346765 23346961 -227340893 + MIR SINE MIR 21 220 -42 838 154 0 14 chr2 23348872 23349015 -227338839 - MLT1B LTR MaLR 0 390 250 270 285 86 93 chr2 23349016 23349167 -227338687 + MER5A DNA MER1_type 27 176 -13 588 250 45 60 chr2 23349968 23350055 -227337799 + MIR SINE MIR 64 151 -111 2185 104 3 0 chr2 23350055 23350352 -227337502 + AluSp SINE Alu 1 298 -15 588 250 45 60 chr2 23350352 23350464 -227337390 + MIR SINE MIR 151 260 -2 249 323 38 8 chr2 23352811 23352944 -227334910 + L2 LINE L2 2369 2505 -809 197 277 46 0 chr2 23352917 23352982 -227334872 + L2 LINE L2 3205 3272 0 * 373 278 145 61 chr2 23353174 23353566 -227334288 + L2 LINE L2 2830 3254 -18 2189 86 0 10 chr2 23355154 23355455 -227332399 + AluSc SINE Alu 1 298 -11 297 257 48 38 chr2 23355830 23355935 -227331919 + MIR SINE MIR 92 197 -65 1758 120 16 72 chr2 23357462 23357830 -227330024 - MER4A LTR ERV1 0 664 259 444 165 87 9 chr2 23357843 23357958 -227329896 - MER4A LTR ERV1 -539 125 2 262 325 127 25 chr2 23359511 23359708 -227328146 - MIR SINE MIR -36 226 10 2133 114 3 7 chr2 23360043 23360341 -227327513 - AluSx SINE Alu -15 297 1 259 254 0 15 chr2 23361551 23361618 -227326236 - L2 LINE L2 -2 3311 3246 235 340 61 36 chr2 23361971 23362143 -227325711 - MIR SINE MIR -63 145 16 812 193 18 94 chr2 23364601 23364824 -227323030 - MER63A DNA MER1_type -4 206 1 213 286 39 0 chr2 23365607 23365684 -227322170 - MIR SINE MIR -61 147 68 1754 144 0 24 chr2 23367008 23367306 -227320548 - AluJo SINE Alu -21 291 1 236 284 70 0 chr2 23367963 23368057 -227319797 - MIR SINE MIR -61 147 53 218 314 0 97 chr2 23372148 23372272 -227315582 + MIR SINE MIR 150 261 -1 180 346 23 54 chr2 23372272 23372402 -227315452 + L2 LINE L2 2924 3049 -223 810 184 10 7 chr2 23372847 23373013 -227314841 + L1ME2 LINE L1 6012 6183 -1 2989 132 18 25 chr2 23373317 23373832 -227314022 + L1MB3 LINE L1 5673 6183 0 261 0 0 0 chr2 23374782 23374811 -227313043 + (CA)n Simple_repeat Simple_repeat 1 29 0 342 80 0 0 chr2 23374811 23374861 -227312993 + (TC)n Simple_repeat Simple_repeat 1 50 0 465 50 0 0 chr2 23375309 23375369 -227312485 + (CA)n Simple_repeat Simple_repeat 2 61 0 336 351 60 12 chr2 23375920 23376088 -227311766 - MIR3 SINE MIR -15 193 18 299 161 145 0 chr2 23376135 23376197 -227311657 - MER5A DNA MER1_type -115 74 4 1951 149 3 3 chr2 23377324 23377633 -227310221 - AluJb SINE Alu -3 309 1 926 183 76 15 chr2 23378140 23378337 -227309517 - MER3 DNA MER1_type 0 209 1 885 276 141 42 chr2 23378494 23378991 -227308863 - MLT1K LTR MaLR -10 578 33 321 172 0 0 chr2 23379129 23379193 -227308661 + (TGGA)n Simple_repeat Simple_repeat 1 64 0 329 294 18 55 chr2 23380775 23380843 -227307011 + MIR SINE MIR 81 150 -112 408 237 168 67 chr2 23380843 23381248 -227306606 - MLT1J1 LTR MaLR 0 446 1 329 294 18 55 chr2 23381248 23381342 -227306512 + MIR SINE MIR 150 237 -25 215 309 62 0 chr2 23382123 23382204 -227305650 - L2 LINE L2 -5 3308 3223 781 235 11 16 chr2 23382215 23382398 -227305456 + MIR SINE MIR 12 193 -69 1062 256 97 4 chr2 23382413 23383020 -227304834 - L2 LINE L2 -97 3216 2546 327 326 39 8 chr2 23383133 23383262 -227304592 + MIR3 SINE MIR 15 147 -61 370 321 146 6 chr2 23385302 23385467 -227302387 + MIR SINE MIR 69 256 -6 242 229 0 0 chr2 23385471 23385519 -227302335 + (TAG)n Simple_repeat Simple_repeat 3 50 0 195 311 27 14 chr2 23385727 23385801 -227302053 - L2 LINE L2 -171 3101 3027 639 169 0 0 chr2 23386144 23386292 -227301562 + (CA)n Simple_repeat Simple_repeat 2 149 0 888 273 85 56 chr2 23386308 23386684 -227301170 + MLT1I LTR MaLR 20 409 0 31 0 0 0 chr2 23387352 23387383 -227300471 + AT_rich Low_complexity Low_complexity 1 31 0 182 313 45 45 chr2 23389554 23389621 -227298233 + MIR SINE MIR 35 101 -107 229 224 282 12 chr2 23389678 23389763 -227298091 + MER5A DNA MER1_type 55 162 -27 * 540 194 0 0 chr2 23389692 23389796 -227298058 - MER5A DNA MER1_type -80 109 6 382 304 0 48 chr2 23389936 23390104 -227297750 - L1MB1 LINE L1 -25 6164 6005 651 206 0 86 chr2 23390106 23390315 -227297539 + L1MA10 LINE L1 6144 6334 0 2301 98 3 0 chr2 23390644 23390951 -227296903 - AluSx SINE Alu -4 308 1 272 223 252 0 chr2 23391486 23391625 -227296229 - MER96 DNA MER1_type? -1 174 1 1927 133 3 47 chr2 23394248 23394565 -227293289 + AluSx SINE Alu 1 303 -9 310 256 0 0 chr2 23395739 23395817 -227292037 - MLT1I LTR MaLR -3 406 329 407 284 56 12 chr2 23395949 23396111 -227291743 - MLT1J2 LTR MaLR -281 169 1 2036 117 23 7 chr2 23396294 23396593 -227291261 - AluSx SINE Alu -6 306 3 324 298 48 0 chr2 23396747 23396851 -227291003 - L2 LINE L2 0 3313 3205 755 325 184 33 chr2 23397016 23397324 -227290530 - L2 LINE L2 -340 2974 2714 186 43 0 0 chr2 23397324 23397347 -227290507 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 755 325 184 33 chr2 23397347 23398092 -227289762 - L2 LINE L2 -600 2714 1762 2181 125 0 0 chr2 23398155 23398460 -227289394 - AluSc SINE Alu -4 305 1 205 333 80 33 chr2 23399454 23399604 -227288250 + MIR SINE MIR 56 212 -50 331 282 176 21 chr2 23399804 23399946 -227287908 + MIR SINE MIR 45 208 -54 401 324 16 70 chr2 23400831 23401016 -227286838 - MIR SINE MIR -57 205 31 246 231 0 0 chr2 23401359 23401424 -227286430 + (TG)n Simple_repeat Simple_repeat 2 66 0 816 234 49 35 chr2 23402784 23403010 -227284844 + MIR SINE MIR 7 235 -27 939 119 0 8 chr2 23403121 23403255 -227284599 - AluSq/x SINE Alu -180 133 1 363 316 65 0 chr2 23404185 23404340 -227283514 - MIR3 SINE MIR -23 185 21 712 288 83 21 chr2 23404505 23404745 -227283109 + MIR SINE MIR 2 256 -6 1092 271 81 27 chr2 23406158 23406674 -227281180 - MLT1H LTR MaLR 0 549 6 755 289 147 16 chr2 23409255 23409739 -227278115 + MLT1L LTR MaLR 1 547 -68 281 320 47 29 chr2 23410077 23410249 -227277605 + L2 LINE L2 2863 3037 -235 26 30 0 0 chr2 23410457 23410490 -227277364 + AT_rich Low_complexity Low_complexity 1 33 0 2365 48 41 0 chr2 23410588 23410879 -227276975 - AluY SINE Alu -8 303 1 486 257 125 0 chr2 23411185 23411337 -227276517 - MIR SINE MIR -12 250 80 372 314 51 29 chr2 23412174 23412349 -227275505 + MIR SINE MIR 13 191 -71 1138 196 31 9 chr2 23412390 23412619 -227275235 + L1MB4 LINE L1 5947 6180 0 380 298 139 6 chr2 23413373 23413531 -227274323 - MIR SINE MIR -4 258 80 2204 117 0 0 chr2 23413914 23414221 -227273633 + AluSx SINE Alu 1 307 -5 1996 106 7 3 chr2 23415065 23415347 -227272507 + AluSx SINE Alu 7 289 -23 2232 113 0 3 chr2 23415356 23415665 -227272189 + AluSq SINE Alu 1 308 -5 961 266 12 12 chr2 23416170 23416429 -227271425 + MIR SINE MIR 4 262 0 211 316 120 17 chr2 23416463 23416580 -227271274 + L2 LINE L2 3136 3264 -8 551 319 38 30 chr2 23416997 23417232 -227270622 - MIR SINE MIR -14 248 12 481 341 78 27 chr2 23417184 23417592 -227270262 + L2 LINE L2 2246 2674 -640 * 339 287 11 83 chr2 23417877 23417980 -227269874 + MIR SINE MIR 94 203 -59 2359 61 0 7 chr2 23417980 23418273 -227269581 + AluY SINE Alu 1 291 -20 339 287 11 83 chr2 23418273 23418285 -227269569 + MIR SINE MIR 203 214 -48 2143 113 0 0 chr2 23418285 23418576 -227269278 + AluY SINE Alu 1 291 -20 339 287 11 83 chr2 23418576 23418588 -227269266 + MIR SINE MIR 214 225 -37 2130 114 0 3 chr2 23418588 23418886 -227268968 + AluSc SINE Alu 1 297 -12 339 287 11 83 chr2 23418886 23418937 -227268917 + MIR SINE MIR 225 261 -1 2335 86 0 7 chr2 23419435 23419738 -227268116 + AluSq SINE Alu 1 301 -12 1326 240 95 39 chr2 23420698 23421139 -227266715 + MLT1C LTR MaLR 1 466 -1 2147 129 3 0 chr2 23422616 23422927 -227264927 - AluSx SINE Alu 0 312 1 933 194 0 17 chr2 23424062 23424242 -227263612 - L1MB5 LINE L1 -6 6168 5992 2263 77 30 3 chr2 23424254 23424552 -227263302 - AluSq SINE Alu -7 306 1 210 378 20 0 chr2 23424746 23424844 -227263010 + L2 LINE L2 3173 3272 0 271 252 30 99 chr2 23426489 23426620 -227261234 + MER5A DNA MER1_type 60 181 -8 280 122 0 0 chr2 23427764 23427805 -227260049 + MER91 DNA MER1_type 4 44 -96 353 317 63 7 chr2 23427951 23428093 -227259761 - MIR3 SINE MIR -53 155 6 468 296 125 58 chr2 23428733 23429148 -227258706 - L2 LINE L2 0 3313 2871 211 362 58 19 chr2 23429419 23429626 -227258228 + L2 LINE L2 2461 2675 -639 217 234 0 0 chr2 23429908 23429955 -227257899 + L2 LINE L2 3226 3272 0 259 276 0 69 chr2 23431878 23431965 -227255889 + MIR SINE MIR 111 191 -71 369 241 29 92 chr2 23433160 23433334 -227254520 - MIR SINE MIR -55 207 45 333 0 0 0 chr2 23435201 23435238 -227252616 + (TG)n Simple_repeat Simple_repeat 2 38 0 322 219 31 0 chr2 23435238 23435302 -227252552 + L1MC4 LINE L1 6640 6705 -1337 2334 102 0 3 chr2 23435303 23435616 -227252238 - AluSx SINE Alu 0 312 1 204 219 234 0 chr2 23435618 23435682 -227252172 + MIR3 SINE MIR 124 202 -6 390 264 155 13 chr2 23436036 23436191 -227251663 - MIR SINE MIR 0 262 86 212 289 48 29 chr2 23437123 23437227 -227250627 + MIR SINE MIR 89 194 -68 279 290 23 11 chr2 23437366 23437542 -227250312 + (TA)n Simple_repeat Simple_repeat 2 179 0 673 293 85 29 chr2 23438798 23439044 -227248810 - MIR SINE MIR 0 262 3 881 149 0 8 chr2 23440511 23440645 -227247209 - FLAM_C SINE Alu 0 133 1 1483 86 247 0 chr2 23442031 23442286 -227245568 - AluYb8 SINE Alu 0 318 1 1675 162 52 0 chr2 23442999 23443289 -227244565 - AluJb SINE Alu -7 305 1 2177 102 3 0 chr2 23443665 23443960 -227243894 - AluSx SINE Alu -16 296 1 273 57 0 0 chr2 23444031 23444066 -227243788 + (TG)n Simple_repeat Simple_repeat 1 35 0 461 84 14 0 chr2 23444066 23444137 -227243717 + (GA)n Simple_repeat Simple_repeat 2 73 0 1919 171 50 28 chr2 23444711 23445068 -227242786 - MLT1A1 LTR MaLR 0 365 1 2102 131 30 24 chr2 23445451 23445786 -227242068 + MER1B DNA MER1_type 1 337 0 263 327 92 0 chr2 23446250 23446403 -227241451 + L2 LINE L2 3095 3261 -11 201 121 0 0 chr2 23446744 23446777 -227241077 + (TAA)n Simple_repeat Simple_repeat 1 33 0 304 326 12 0 chr2 23446997 23447083 -227240771 - L2 LINE L2 0 3313 3227 601 289 59 15 chr2 23447571 23447775 -227240079 - MIR SINE MIR 0 262 50 664 242 21 21 chr2 23448754 23448940 -227238914 - L2 LINE L2 0 3313 3128 758 290 102 37 chr2 23449366 23450354 -227237500 + L1MEd LINE L1 552 1475 -4835 1889 125 11 0 chr2 23450354 23450658 -227237196 + AluSx SINE Alu 1 307 0 758 290 102 37 chr2 23450658 23451342 -227236512 + L1MEd LINE L1 1475 2398 -3912 2493 65 0 0 chr2 23451375 23451682 -227236172 + AluSg SINE Alu 1 307 -3 1788 119 20 38 chr2 23451735 23452277 -227235577 + MER4A LTR ERV1 1 664 0 349 308 54 21 chr2 23452285 23452525 -227235329 + L1MEd LINE L1 2447 2694 -3435 340 244 225 34 chr2 23452525 23452734 -227235120 - L2 LINE L2 -176 3137 2889 224 193 123 0 chr2 23453079 23453136 -227234718 - MIR SINE MIR -78 184 121 282 353 73 18 chr2 23454481 23454699 -227233155 - MIR SINE MIR 0 262 33 1952 201 86 42 chr2 23456157 23456655 -227231199 + MLT2B1 LTR ERVL 1 520 0 234 271 96 131 chr2 23457717 23458008 -227229846 - L2 LINE L2 -16 3256 2976 198 0 0 0 chr2 23459068 23459090 -227228764 + (CAG)n Simple_repeat Simple_repeat 1 22 0 294 131 28 56 chr2 23459357 23459464 -227228390 + GA-rich Low_complexity Low_complexity 3 106 0 408 258 75 0 chr2 23459967 23460119 -227227735 - MIR SINE MIR -63 145 23 215 210 118 67 chr2 23460138 23460257 -227227597 + L2 LINE L2 2948 3072 -200 633 299 85 0 chr2 23460669 23460880 -227226974 - MIR SINE MIR -21 241 13 211 188 62 0 chr2 23460901 23460949 -227226905 - L2 LINE L2 -96 3176 3126 399 351 36 36 chr2 23462694 23462945 -227224909 - MIR SINE MIR -2 260 10 1562 194 41 36 chr2 23463598 23463914 -227223940 + MLT1A2 LTR MaLR 4 324 -50 2017 107 13 131 chr2 23463914 23464296 -227223558 - MER1B DNA MER1_type 0 337 1 1562 194 41 36 chr2 23464296 23464344 -227223510 + MLT1A2 LTR MaLR 324 370 -4 1992 106 3 20 chr2 23465800 23466101 -227221753 - AluSg SINE Alu -14 296 1 919 172 0 0 chr2 23466397 23466548 -227221306 + FRAM SINE Alu 1 151 -25 211 340 92 25 chr2 23467747 23468062 -227219792 - L2 LINE L2 -1152 2162 1827 274 242 111 40 chr2 23468328 23468369 -227219485 + MIR SINE MIR 42 79 -129 1972 145 0 13 chr2 23468369 23468679 -227219175 - AluSx SINE Alu -6 306 1 274 242 111 40 chr2 23468679 23468736 -227219118 + MIR SINE MIR 79 147 -61 491 319 11 27 chr2 23469841 23470029 -227217825 + MER5A DNA MER1_type 1 185 -4 384 287 67 27 chr2 23470696 23470846 -227217008 - LTR67 LTR ERVL -296 261 106 511 259 38 13 chr2 23471396 23471554 -227216300 - MLT1H1 LTR MaLR -42 513 352 255 200 90 30 chr2 23471542 23471642 -227216212 - MLT1H1 LTR MaLR -308 241 136 * 324 0 0 0 chr2 23471648 23471684 -227216170 + (TG)n Simple_repeat Simple_repeat 2 37 0 207 0 0 0 chr2 23472748 23472771 -227215083 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 314 219 47 0 chr2 23472999 23473063 -227214791 - MER91A DNA MER1_type -3 193 127 248 262 68 29 chr2 23474474 23474577 -227213277 + L2 LINE L2 3169 3275 -38 653 238 127 23 chr2 23475945 23476252 -227211602 - L1ME4a LINE L1 0 6121 5783 349 349 271 18 chr2 23477552 23478543 -227209311 - L3 LINE CR1 -123 1454 213 403 259 94 102 chr2 23479432 23479593 -227208261 - MIR SINE MIR -8 254 94 2241 110 0 0 chr2 23479593 23479894 -227207960 + AluSx SINE Alu 1 301 -11 403 259 94 102 chr2 23479894 23479987 -227207867 - MIR SINE MIR -168 94 2 200 221 206 0 chr2 23480120 23480188 -227207666 + L2 LINE L2 3186 3267 -5 472 252 49 14 chr2 23484694 23484837 -227203017 + MIR SINE MIR 78 225 -37 393 313 165 3 chr2 23485244 23485596 -227202258 + L2 LINE L2 2344 2752 -562 224 353 34 34 chr2 23485738 23485857 -227201997 + L2 LINE L2 3147 3265 -7 463 301 27 0 chr2 23486113 23486259 -227201595 + MIR SINE MIR 113 262 0 793 285 61 0 chr2 23486693 23486939 -227200915 + MIR SINE MIR 2 262 0 188 306 51 20 chr2 23487893 23487991 -227199863 + L2 LINE L2 2725 2825 -489 223 330 232 0 chr2 23489418 23489530 -227198324 - L3 LINE CR1 -438 1139 1002 1786 153 38 38 chr2 23489556 23489929 -227197925 - MLT1B LTR MaLR -17 373 1 769 319 153 25 chr2 23490235 23490667 -227197187 - L3 LINE CR1 -184 1393 907 295 198 52 21 chr2 23491035 23491132 -227196722 - MIR3 SINE MIR -10 198 98 2218 104 0 13 chr2 23491775 23492082 -227195772 + AluSx SINE Alu 1 303 -9 225 330 184 19 chr2 23492600 23492806 -227195048 - MIR SINE MIR -19 243 4 192 179 0 0 chr2 23492972 23493011 -227194843 + (TGGA)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr2 23494824 23494844 -227193010 + (A)n Simple_repeat Simple_repeat 1 20 0 303 272 16 24 chr2 23495937 23496054 -227191800 + C-rich Low_complexity Low_complexity 1 116 0 238 279 0 0 chr2 23496885 23496946 -227190908 + L2 LINE L2 3101 3161 -111 661 298 28 6 chr2 23496962 23497143 -227190711 - MER91B DNA MER1_type -5 185 1 665 277 43 30 chr2 23497147 23497378 -227190476 - MIR SINE MIR -13 249 16 203 329 24 12 chr2 23497770 23497852 -227190002 + L2 LINE L2 2685 2767 -547 2218 117 0 16 chr2 23498635 23498951 -227188903 + AluSq SINE Alu 1 311 -2 1831 179 0 3 chr2 23498951 23499258 -227188596 + AluJo SINE Alu 1 307 -5 287 219 323 0 chr2 23499802 23499898 -227187956 + L2 LINE L2 3187 3313 0 509 247 105 0 chr2 23500773 23500940 -227186914 + MIR SINE MIR 16 197 -61 2288 178 52 0 chr2 23503413 23503818 -227184036 - MSTB LTR MaLR 0 426 1 195 204 0 23 chr2 23504035 23504079 -227183775 - L2 LINE L2 -80 3233 3191 329 247 67 11 chr2 23505255 23505344 -227182510 + MER5B DNA MER1_type 85 178 0 258 307 99 0 chr2 23506161 23506262 -227181592 - L2 LINE L2 -2 3270 3160 642 60 0 0 chr2 23508810 23508893 -227178961 + (TC)n Simple_repeat Simple_repeat 1 83 0 183 270 135 0 chr2 23510527 23510601 -227177253 + L2 LINE L2 3126 3209 -63 207 370 8 8 chr2 23511034 23511153 -227176701 + (CACG)n Simple_repeat Simple_repeat 1 119 0 * 464 297 14 7 chr2 23511091 23511470 -227176384 + (CA)n Simple_repeat Simple_repeat 1 381 0 268 262 12 0 chr2 23511515 23511683 -227176171 + (CA)n Simple_repeat Simple_repeat 1 170 0 266 303 18 9 chr2 23511722 23511831 -227176023 + (CA)n Simple_repeat Simple_repeat 1 110 0 2393 70 3 0 chr2 23514073 23514374 -227173480 - AluY SINE Alu -9 302 1 823 169 0 15 chr2 23514401 23514537 -227173317 + AluJo SINE Alu 1 134 -178 730 217 17 22 chr2 23516267 23516447 -227171407 + MLT1H LTR MaLR 189 367 -182 2600 133 76 7 chr2 23516506 23516951 -227170903 + L1MB2 LINE L1 5696 6171 0 1452 201 143 39 chr2 23517047 23517480 -227170374 - MLT1H LTR MaLR 0 549 72 326 320 44 10 chr2 23517962 23518168 -227169686 - L2 LINE L2 -627 2687 2475 470 195 16 55 chr2 23519541 23519669 -227168185 - MIR3 SINE MIR -77 131 9 258 356 37 7 chr2 23520194 23520329 -227167525 - MIR SINE MIR -122 140 2 316 235 163 0 chr2 23520951 23521049 -227166805 - MIR SINE MIR -56 152 39 26 30 0 0 chr2 23522213 23522246 -227165608 + AT_rich Low_complexity Low_complexity 1 33 0 225 0 0 0 chr2 23522554 23522579 -227165275 + (TCC)n Simple_repeat Simple_repeat 1 25 0 499 318 28 28 chr2 23524218 23524397 -227163457 + MIR3 SINE MIR 11 189 -19 197 350 31 62 chr2 23524547 23524707 -227163147 - L2 LINE L2 -943 2371 2217 180 268 121 53 chr2 23525443 23525633 -227162221 - L2 LINE L2 -105 3167 2965 428 288 113 6 chr2 23528155 23528315 -227159539 - MIR3 SINE MIR -31 177 1 449 321 196 15 chr2 23531981 23532516 -227155338 + L2 LINE L2 2227 2858 -456 224 394 112 0 chr2 23532630 23532879 -227154975 + L2 LINE L2 2964 3240 -32 416 333 90 28 chr2 23537512 23538113 -227149741 + L2 LINE L2 1071 1708 -1606 1617 201 53 15 chr2 23538127 23538524 -227149330 - MER63B DNA MER1_type -24 412 1 209 211 35 35 chr2 23538562 23538619 -227149235 + L2 LINE L2 1754 1810 -1504 256 300 146 47 chr2 23538854 23539322 -227148532 + L2 LINE L2 2230 2753 -561 1946 158 0 14 chr2 23539322 23539619 -227148235 + AluJo SINE Alu 1 293 -19 256 300 146 47 chr2 23539619 23539657 -227148197 + L2 LINE L2 2753 2786 -528 2223 82 6 67 chr2 23539685 23540014 -227147840 - AluSp SINE Alu -4 309 1 1578 129 4 0 chr2 23540066 23540298 -227147556 - Tigger5 DNA MER2_type -5 2318 2086 238 139 0 0 chr2 23540320 23540356 -227147498 - Tigger5 DNA MER2_type -2261 62 27 315 339 35 71 chr2 23540376 23540742 -227147112 + L2 LINE L2 2897 3249 -23 2293 99 0 0 chr2 23542375 23542668 -227145186 + AluSx SINE Alu 1 293 -19 329 250 67 25 chr2 23542831 23542951 -227144903 + MIR3 SINE MIR 77 201 -7 2382 84 3 3 chr2 23543101 23543397 -227144457 + AluSg SINE Alu 1 296 -14 28 0 0 0 chr2 23546127 23546155 -227141699 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 23546464 23546489 -227141365 + AT_rich Low_complexity Low_complexity 1 25 0 2446 83 3 6 chr2 23546918 23547232 -227140622 - AluSp SINE Alu 0 313 1 235 211 144 62 chr2 23548028 23548222 -227139632 + L1M4 LINE L1 5191 5400 -746 300 229 29 0 chr2 23548512 23548582 -227139272 - MER2 DNA MER2_type -6 339 268 1302 144 10 0 chr2 23548608 23548816 -227139038 - MER2 DNA MER2_type -135 210 1 200 239 22 0 chr2 23548833 23548879 -227138975 - L2 LINE L2 -18 3254 3208 33 25 0 0 chr2 23549149 23549189 -227138665 + AT_rich Low_complexity Low_complexity 1 40 0 2367 98 0 16 chr2 23549244 23549561 -227138293 - AluSx SINE Alu 0 312 1 247 207 147 35 chr2 23549784 23549900 -227137954 - MIR SINE MIR -57 205 77 301 93 0 0 chr2 23550972 23551015 -227136839 - MADE1 DNA Mariner 0 80 38 2646 128 43 47 chr2 23551298 23551807 -227136047 - L1MB7 LINE L1 0 6184 5678 480 282 20 0 chr2 23551808 23551957 -227135897 + MER103 DNA DNA 9 160 -6 2510 63 0 3 chr2 23552130 23552430 -227135424 - AluY SINE Alu -12 299 1 2382 110 0 0 chr2 23552463 23552763 -227135091 + AluSx SINE Alu 1 300 -12 2383 72 3 3 chr2 23553183 23553476 -227134378 + AluY SINE Alu 1 293 -18 22 0 0 0 chr2 23553488 23553510 -227134344 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr2 23554329 23554364 -227133490 + (TTG)n Simple_repeat Simple_repeat 2 36 0 185 279 32 84 chr2 23554595 23554749 -227133105 + L2 LINE L2 1106 1251 -2063 284 365 46 27 chr2 23555901 23556120 -227131734 + L1MC2 LINE L1 5 227 -6313 2595 175 56 2 chr2 23556500 23556979 -227130875 - MLT1D LTR MaLR 0 505 1 643 242 26 86 chr2 23556996 23557298 -227130556 + L1MC2 LINE L1 922 1205 -5338 4397 160 13 4 chr2 23557299 23558004 -227129850 + L1M3f LINE L1 1 711 -4617 11199 158 43 94 chr2 23558018 23558182 -227129672 + L1MA5A LINE L1 14 185 -6604 2150 122 3 20 chr2 23558182 23558485 -227129369 + AluSx SINE Alu 1 298 -14 11199 158 43 94 chr2 23558485 23560765 -227127089 + L1MA5A LINE L1 185 2333 -4456 511 198 13 26 chr2 23560734 23560899 -227126955 + L1MA5A LINE L1 5811 5972 -816 * 1916 167 0 3 chr2 23560900 23561193 -227126661 + AluJb SINE Alu 1 292 -20 477 233 13 6 chr2 23561224 23561383 -227126471 + G-rich Low_complexity Low_complexity 3 162 0 4940 111 23 14 chr2 23561397 23562298 -227125556 + L1MA5A LINE L1 5963 6935 -4 2801 226 96 36 chr2 23562324 23562652 -227125202 + L1MC2 LINE L1 1427 1734 -4806 2722 46 0 0 chr2 23562652 23562957 -227124897 + AluY SINE Alu 1 305 -6 2801 226 96 36 chr2 23562957 23563688 -227124166 + L1MC2 LINE L1 1734 2550 -3990 2721 132 93 137 chr2 23563695 23564114 -227123740 + L1MB2 LINE L1 5444 5817 -354 2305 136 64 33 chr2 23564114 23564534 -227123320 - Tigger2a DNA MER2_type 0 434 2 2721 132 93 137 chr2 23564534 23564873 -227122981 + L1MB2 LINE L1 5817 6169 -2 328 217 38 57 chr2 23564870 23565027 -227122827 + L1MC2 LINE L1 2573 2726 -3995 * 5633 159 54 13 chr2 23565029 23566147 -227121707 + L1MC2 LINE L1 5582 6737 -1 906 226 50 81 chr2 23566150 23566728 -227121126 + L1MC4a LINE L1 5889 6483 -1325 2377 92 169 5 chr2 23566728 23567096 -227120758 - MSTA LTR MaLR 0 428 1 906 226 50 81 chr2 23567096 23567107 -227120747 + L1MC4a LINE L1 6483 6493 -1315 1574 190 145 18 chr2 23567107 23567549 -227120305 + LTR54B LTR ERV1 1 498 0 906 226 50 81 chr2 23567549 23567573 -227120281 + L1MC4a LINE L1 6493 6538 -1270 2734 216 99 46 chr2 23567581 23568275 -227119579 + L1MDa LINE L1 2666 3432 -3108 2656 68 0 0 chr2 23568275 23568586 -227119268 + AluY SINE Alu 1 311 0 2734 216 99 46 chr2 23568586 23568900 -227118954 + L1MDa LINE L1 3432 3728 -2812 1966 194 47 87 chr2 23568907 23569436 -227118418 + L1MC5 LINE L1 6834 7328 -633 1135 141 141 24 chr2 23569436 23569594 -227118260 - MER33 DNA MER1_type -2261 324 186 1346 178 75 68 chr2 23569594 23569887 -227117967 + AluJo SINE Alu 1 295 -17 1135 141 141 24 chr2 23569887 23570018 -227117836 - MER33 DNA MER1_type -2399 186 1 1966 194 47 87 chr2 23570018 23570209 -227117645 + L1MC5 LINE L1 7328 7525 -436 269 294 93 52 chr2 23570291 23570485 -227117369 + L1ME3A LINE L1 5962 6163 -7 690 263 56 16 chr2 23570727 23570978 -227116876 + MIR SINE MIR 2 262 0 468 324 149 29 chr2 23571359 23571803 -227116051 + L2 LINE L2 2174 2670 -644 229 318 85 102 chr2 23571839 23571993 -227115861 + L2 LINE L2 2918 3073 -199 2155 117 112 50 chr2 23571993 23572049 -227115805 - MSTA LTR MaLR 0 428 377 2165 116 3 10 chr2 23572049 23572350 -227115504 - AluSx SINE Alu -13 299 1 2155 117 112 50 chr2 23572350 23572696 -227115158 - MSTA LTR MaLR -51 377 1 229 318 85 102 chr2 23572696 23572893 -227114961 + L2 LINE L2 3073 3263 -9 324 295 16 25 chr2 23574081 23574203 -227113651 - HAL1 LINE L1 -1753 754 634 834 223 54 12 chr2 23574219 23574461 -227113393 + HAL1 LINE L1 800 1051 -1456 * 45526 35 1 1 chr2 23574459 23580608 -227107246 + L1PA4 LINE L1 13 6155 0 401 300 90 9 chr2 23580747 23580970 -227106884 + HAL1 LINE L1 1284 1524 -983 1313 226 100 102 chr2 23580996 23581175 -227106679 + HAL1 LINE L1 1769 1947 -560 2119 102 27 14 chr2 23581175 23581469 -227106385 + AluSx SINE Alu 1 298 -14 1313 226 100 102 chr2 23581469 23581527 -227106327 + HAL1 LINE L1 1947 2004 -503 1702 154 7 7 chr2 23581527 23581799 -227106055 - AluJo SINE Alu -23 289 18 1313 226 100 102 chr2 23581799 23582299 -227105555 + HAL1 LINE L1 2004 2506 -1 887 263 0 26 chr2 23582380 23582612 -227105242 - MIR SINE MIR -4 258 33 1972 122 0 4 chr2 23582894 23583172 -227104682 + AluSx SINE Alu 1 277 -35 228 130 0 0 chr2 23583174 23583220 -227104634 + (CAAG)n Simple_repeat Simple_repeat 3 48 0 790 37 0 59 chr2 23583235 23583371 -227104483 + (GGAA)n Simple_repeat Simple_repeat 2 129 0 584 292 84 0 chr2 23583418 23583620 -227104234 + MIR SINE MIR 16 234 -28 346 226 28 19 chr2 23583689 23583795 -227104059 + L2 LINE L2 3168 3274 -39 188 261 46 0 chr2 23583884 23583949 -227103905 + L2 LINE L2 2909 2976 -296 888 194 116 41 chr2 23584109 23584351 -227103503 + MIR SINE MIR 2 261 -1 200 305 84 21 chr2 23584358 23584453 -227103401 + L2 LINE L2 3163 3263 -9 562 233 0 0 chr2 23584828 23584948 -227102906 + L2 LINE L2 3193 3312 -1 266 119 45 15 chr2 23585189 23585256 -227102598 + (TA)n Simple_repeat Simple_repeat 1 69 0 236 303 124 0 chr2 23585558 23585647 -227102207 + L2 LINE L2 3143 3242 -30 22 0 0 0 chr2 23587814 23587836 -227100018 + AT_rich Low_complexity Low_complexity 1 22 0 250 162 27 0 chr2 23590337 23590411 -227097443 + (TA)n Simple_repeat Simple_repeat 1 76 0 590 214 103 0 chr2 23590446 23590572 -227097282 - MIR SINE MIR -104 158 20 353 257 89 10 chr2 23591196 23591297 -227096557 + L2 LINE L2 3190 3298 -15 257 317 14 35 chr2 23591377 23591519 -227096335 + L3 LINE CR1 1275 1413 -164 273 357 123 6 chr2 23594705 23594876 -227092978 - MIR SINE MIR -25 237 47 267 271 156 10 chr2 23598156 23598252 -227089602 + L2 LINE L2 3201 3310 -3 2004 142 0 10 chr2 23598269 23598579 -227089275 + AluSx SINE Alu 1 307 -5 585 42 0 0 chr2 23598590 23598662 -227089192 + (CA)n Simple_repeat Simple_repeat 2 73 0 1312 113 0 10 chr2 23599246 23599441 -227088413 + MER46A DNA MER2_type 44 236 0 416 301 58 90 chr2 23600641 23601140 -227086714 + L2 LINE L2 2014 2496 -818 2081 200 20 38 chr2 23601181 23601234 -227086620 - L1MB8 LINE L1 -192 5986 5934 472 229 8 0 chr2 23601234 23601352 -227086502 - L1MB7 LINE L1 -10 6174 6056 2081 200 20 38 chr2 23601352 23601487 -227086367 - L1MB8 LINE L1 -244 5934 5798 1776 176 0 7 chr2 23601487 23601782 -227086072 - AluJo SINE Alu -19 293 1 2081 200 20 38 chr2 23601782 23602097 -227085757 - L1MB8 LINE L1 -380 5798 5550 381 278 19 28 chr2 23602213 23602321 -227085533 - MER5A DNA MER1_type -3 186 80 273 289 123 8 chr2 23602387 23602589 -227085265 - L2 LINE L2 -3 3310 3030 229 311 66 78 chr2 23602687 23602944 -227084910 + L2 LINE L2 2923 3176 -96 317 338 34 81 chr2 23604680 23604914 -227082940 - L2 LINE L2 -173 3099 2877 1774 189 153 27 chr2 23604919 23605395 -227082459 + LTR10A LTR ERV1 13 548 -61 706 326 65 41 chr2 23605493 23605780 -227082074 - L2 LINE L2 -611 2703 2401 182 62 31 0 chr2 23605780 23605812 -227082042 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 706 326 65 41 chr2 23605812 23605938 -227081916 - L2 LINE L2 -913 2401 2280 1357 245 20 69 chr2 23606029 23606143 -227081711 - L1ME1 LINE L1 -12 6227 6109 1489 144 6 117 chr2 23606143 23606476 -227081378 + AluJo SINE Alu 1 296 -6 1357 245 20 69 chr2 23606476 23606948 -227080906 - L1ME1 LINE L1 -130 6109 5675 414 216 10 62 chr2 23606951 23607048 -227080806 + MER2 DNA MER2_type 6 97 -248 2065 89 4 7 chr2 23607048 23607329 -227080525 + AluSg SINE Alu 1 280 -30 30 0 0 0 chr2 23607329 23607359 -227080495 + AT_rich Low_complexity Low_complexity 1 30 0 1095 186 33 89 chr2 23607429 23607602 -227080252 - L1ME1 LINE L1 -562 5673 5492 1733 118 114 7 chr2 23607602 23607873 -227079981 - AluSg1 SINE Alu -9 300 1 1095 186 33 89 chr2 23607873 23607919 -227079935 - L1ME1 LINE L1 -743 5492 5445 2069 111 7 21 chr2 23607919 23608238 -227079616 + AluSx SINE Alu 3 317 0 1095 186 33 89 chr2 23608238 23608379 -227079475 - L1ME1 LINE L1 -790 5445 5322 * 3322 226 82 13 chr2 23608372 23609342 -227078512 - L1ME1 LINE L1 -1115 5100 4064 482 161 117 72 chr2 23609443 23609623 -227078231 - L1ME1 LINE L1 -4121 2275 2088 * 1534 246 74 32 chr2 23609621 23610096 -227077758 - L1ME1 LINE L1 -5863 533 39 354 253 27 33 chr2 23610119 23610269 -227077585 - L1ME4a LINE L1 -279 5842 5694 1514 167 10 48 chr2 23610638 23610931 -227076923 - AluJo SINE Alu -30 282 1 1441 182 14 67 chr2 23611113 23611410 -227076444 + AluJo SINE Alu 1 281 -31 303 256 56 72 chr2 23611642 23611767 -227076087 + MIR SINE MIR 29 151 -111 1552 206 16 16 chr2 23612062 23612368 -227075486 + AluJo SINE Alu 1 306 -6 2268 116 0 0 chr2 23612507 23612817 -227075037 + AluSq SINE Alu 1 310 -3 2177 93 4 0 chr2 23613086 23613401 -227074453 - AluSc SINE Alu 0 316 1 360 297 203 17 chr2 23613617 23613750 -227074104 + L2 LINE L2 2132 2239 -1075 2059 86 4 0 chr2 23613750 23614029 -227073825 + AluSc SINE Alu 25 304 0 360 297 203 17 chr2 23614029 23614184 -227073670 + L2 LINE L2 2239 2475 -839 1777 158 70 57 chr2 23614783 23615168 -227072686 + MLT1B LTR MaLR 1 390 0 228 143 0 0 chr2 23615237 23615279 -227072575 + (TA)n Simple_repeat Simple_repeat 2 43 0 208 306 0 0 chr2 23616482 23616544 -227071310 - MIR SINE MIR -3 259 198 240 88 0 0 chr2 23616557 23616591 -227071263 + MER116 DNA Mariner 47 80 0 632 265 54 6 chr2 23616599 23616765 -227071089 - MIR SINE MIR -70 192 19 455 304 103 38 chr2 23616849 23617033 -227070821 + MER91A DNA MER1_type 1 196 0 2527 77 0 0 chr2 23617053 23617364 -227070490 - AluY SINE Alu 0 311 1 495 262 40 20 chr2 23617388 23617590 -227070264 + L1ME LINE L1 5563 5768 -353 1699 172 3 14 chr2 23617852 23618148 -227069706 + AluJo SINE Alu 1 293 -19 333 0 0 0 chr2 23618157 23618194 -227069660 + (TG)n Simple_repeat Simple_repeat 2 38 0 183 275 0 0 chr2 23618437 23618477 -227069377 - MER5B DNA MER1_type -138 40 1 2059 119 7 13 chr2 23618507 23618810 -227069044 + AluSx SINE Alu 1 301 -11 1625 162 101 204 chr2 23618924 23619219 -227068635 + MER90 LTR ERV1 1 325 -289 417 20 0 0 chr2 23619219 23619269 -227068585 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 2108 134 0 0 chr2 23619272 23619571 -227068283 + AluSx SINE Alu 1 299 -13 1625 162 101 204 chr2 23619571 23619691 -227068163 + MER90 LTR ERV1 327 458 -156 1871 168 0 13 chr2 23619691 23620006 -227067848 - AluJb SINE Alu -1 311 1 1625 162 101 204 chr2 23620006 23620270 -227067584 + MER90 LTR ERV1 458 614 0 29 60 0 0 chr2 23621001 23621051 -227066803 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr2 23622604 23622628 -227065226 + AT_rich Low_complexity Low_complexity 1 24 0 274 265 44 0 chr2 23622829 23622897 -227064957 + MIR SINE MIR 120 190 -72 2184 129 42 3 chr2 23624214 23624548 -227063306 - MER7A DNA MER2_type 0 346 2 25 65 0 0 chr2 23624643 23624689 -227063165 + AT_rich Low_complexity Low_complexity 1 46 0 308 341 61 15 chr2 23627267 23627399 -227060455 + L2 LINE L2 3134 3271 -1 475 218 82 9 chr2 23627655 23627765 -227060089 - MIR SINE MIR -71 191 74 2690 186 127 17 chr2 23628740 23629338 -227058516 - L1MB8 LINE L1 -61 6117 5433 340 139 38 38 chr2 23629338 23629417 -227058437 + MADE1 DNA Mariner 1 79 -1 2690 186 127 17 chr2 23629417 23629506 -227058348 - L1MB8 LINE L1 -745 5433 5355 2425 166 55 7 chr2 23629500 23629957 -227057897 - L1MB3 LINE L1 -242 5941 5463 * 2068 93 54 0 chr2 23629957 23630236 -227057618 - AluY SINE Alu -17 294 1 2475 77 0 3 chr2 23630570 23630880 -227056974 + AluY SINE Alu 1 309 -2 21 36 0 0 chr2 23631475 23631503 -227056351 + AT_rich Low_complexity Low_complexity 1 28 0 254 325 12 0 chr2 23631584 23631664 -227056190 - L2 LINE L2 -5 3267 3187 1093 171 157 51 chr2 23631689 23631905 -227055949 - Charlie1 DNA MER1_type 0 2761 2569 1984 146 10 0 chr2 23631905 23632199 -227055655 - AluJb SINE Alu -15 297 1 1093 171 157 51 chr2 23632199 23632428 -227055426 - Charlie1 DNA MER1_type -192 2569 1 306 171 86 71 chr2 23632436 23632576 -227055278 - Charlie7 DNA MER1_type 0 2612 2471 354 244 101 6 chr2 23632997 23633165 -227054689 - L1ME4a LINE L1 0 6121 5938 395 214 0 0 chr2 23633216 23633286 -227054568 - AluJ/FRAM SINE Alu -3 299 230 2289 110 7 0 chr2 23633488 23633798 -227054056 + AluSx SINE Alu 1 312 0 860 139 8 0 chr2 23633841 23633963 -227053891 + FLAM_C SINE Alu 1 123 -20 251 247 49 12 chr2 23634713 23634794 -227053060 - MIR SINE MIR -107 155 72 1762 134 106 12 chr2 23635443 23635772 -227052082 - MER46B DNA MER2_type -1 235 1 303 286 252 7 chr2 23635785 23635932 -227051922 - MIR SINE MIR -37 225 43 22 0 0 0 chr2 23635932 23635954 -227051900 + AT_rich Low_complexity Low_complexity 1 22 0 2335 103 7 0 chr2 23637180 23637490 -227050364 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 23637969 23637992 -227049862 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 23638706 23638728 -227049126 + AT_rich Low_complexity Low_complexity 1 22 0 190 191 24 0 chr2 23639067 23639109 -227048745 + MER5C DNA MER1_type 74 116 -208 21 57 0 0 chr2 23639594 23639629 -227048225 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr2 23640030 23640056 -227047798 + AT_rich Low_complexity Low_complexity 1 26 0 252 86 0 0 chr2 23641203 23641238 -227046616 + (CA)n Simple_repeat Simple_repeat 2 36 0 451 257 44 71 chr2 23641294 23641477 -227046377 + MER5A DNA MER1_type 9 186 -3 2231 108 0 9 chr2 23642747 23643062 -227044792 + AluSq SINE Alu 1 312 -1 444 296 57 61 chr2 23643247 23643511 -227044343 - L1MC4a LINE L1 -1921 5887 5625 2416 103 0 0 chr2 23693719 23694031 -226993823 - AluSx SINE Alu 0 312 1 449 175 185 37 chr2 23694151 23694340 -226993514 + L1MB8 LINE L1 5116 5332 -814 849 163 0 0 chr2 23694340 23694469 -226993385 + FLAM_C SINE Alu 1 129 -14 3011 163 113 39 chr2 23694474 23695223 -226992631 + L1MB8 LINE L1 5315 6007 -171 2272 121 0 0 chr2 23695223 23695520 -226992334 + AluSq SINE Alu 1 297 -16 3011 163 113 39 chr2 23695520 23695540 -226992314 + L1MB8 LINE L1 6007 6024 -154 8884 168 60 17 chr2 23695540 23697222 -226990632 - MER52A LTR ERV1 0 1755 1 3011 163 113 39 chr2 23697222 23697250 -226990604 + L1MB8 LINE L1 6024 6172 -6 620 265 71 18 chr2 23698147 23698430 -226989424 - L1MC4a LINE L1 -1089 5057 4760 969 303 35 25 chr2 23698726 23699247 -226988607 - L1MC4a LINE L1 -1909 4237 3712 1564 207 39 55 chr2 23699282 23699774 -226988080 - L1ME1 LINE L1 -4 6231 5748 255 229 49 57 chr2 23699942 23700064 -226987790 - L1ME1 LINE L1 -2895 3320 3200 567 268 59 55 chr2 23700143 23700489 -226987365 - L1ME1 LINE L1 -3364 2851 2501 1560 151 0 103 chr2 23700489 23700808 -226987046 - AluJb SINE Alu -16 286 1 567 268 59 55 chr2 23700808 23700968 -226986886 - L1ME1 LINE L1 -3714 2501 2343 * 1537 116 0 34 chr2 23700960 23701081 -226986773 - L1MB7 LINE L1 -236 5948 5824 1667 204 0 7 chr2 23701081 23701380 -226986474 - AluJo SINE Alu -11 301 5 1537 116 0 34 chr2 23701380 23701525 -226986329 - L1MB7 LINE L1 -360 5824 5691 487 267 25 4 chr2 23701533 23701785 -226986069 - L1ME1 LINE L1 -3851 2364 2148 1610 236 65 21 chr2 23702242 23702904 -226984950 + L1ME LINE L1 784 1515 -5073 292 262 7 12 chr2 23702916 23703055 -226984799 + L1ME LINE L1 1552 1836 -4885 2431 260 81 44 chr2 23703066 23703502 -226984352 + L1MEc LINE L1 236 654 -5742 2311 105 0 3 chr2 23703502 23703808 -226984046 - AluSx SINE Alu -7 305 1 2431 260 81 44 chr2 23703808 23704723 -226983131 + L1MEc LINE L1 654 1638 -4758 1632 227 70 39 chr2 23704725 23705139 -226982715 + L1MB7 LINE L1 5585 6023 -161 2161 141 0 0 chr2 23705139 23705444 -226982410 - AluJo SINE Alu -3 309 5 1632 227 70 39 chr2 23705444 23705601 -226982253 + L1MB7 LINE L1 6023 6174 -10 1151 185 58 29 chr2 23705614 23705708 -226982146 + AluJb SINE Alu 42 132 -180 2205 103 0 3 chr2 23705708 23705999 -226981855 + AluSg SINE Alu 1 290 -20 1151 185 58 29 chr2 23705999 23706147 -226981707 + AluJb SINE Alu 132 291 -21 2258 102 0 26 chr2 23706189 23706494 -226981360 + AluSg SINE Alu 1 297 -13 1144 227 139 15 chr2 23706561 23706705 -226981149 + L1MEc LINE L1 1730 1855 -4541 1794 129 85 0 chr2 23706705 23706977 -226980877 + AluSx SINE Alu 1 295 -17 1144 227 139 15 chr2 23706977 23707307 -226980547 + L1MEc LINE L1 1855 2263 -4133 297 243 7 79 chr2 23707317 23707469 -226980385 + L1MA10 LINE L1 6187 6327 -7 521 227 99 58 chr2 23707471 23707713 -226980141 + L1ME LINE L1 2385 2636 -3904 593 256 81 49 chr2 23707715 23708034 -226979820 + L1ME LINE L1 2660 2996 -3544 2094 111 17 0 chr2 23708034 23708323 -226979531 + AluSx SINE Alu 1 294 -18 593 256 81 49 chr2 23708323 23708413 -226979441 + L1ME LINE L1 2996 3082 -3458 1273 79 22 11 chr2 23708465 23708643 -226979211 + AluY SINE Alu 122 301 -10 891 185 46 46 chr2 23708656 23708981 -226978873 + L1ME LINE L1 3178 3502 -3038 1180 155 33 59 chr2 23708983 23709254 -226978600 + L1MC2 LINE L1 5839 6102 -242 1257 188 50 122 chr2 23709264 23709626 -226978228 + MLT1A1 LTR MaLR 1 327 -38 1686 182 17 3 chr2 23709634 23709925 -226977929 - AluJb SINE Alu -17 295 1 1297 202 65 12 chr2 23709937 23710259 -226977595 - L1MC1 LINE L1 0 6333 5995 4271 222 79 69 chr2 23710297 23710780 -226977074 + L1ME LINE L1 3546 4023 -2535 809 173 0 0 chr2 23710780 23710907 -226976947 - FLAM_C SINE Alu -4 129 3 4271 222 79 69 chr2 23710907 23711121 -226976733 + L1ME LINE L1 4023 4233 -2325 2259 104 0 0 chr2 23711121 23711419 -226976435 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 23711419 23712448 -226975406 + L1ME LINE L1 4233 5250 -1308 2136 125 3 0 chr2 23712448 23712745 -226975109 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 23712745 23712880 -226974974 + L1ME LINE L1 5250 5382 -1176 2280 101 0 0 chr2 23712880 23713178 -226974676 + AluSq SINE Alu 1 298 -15 4271 222 79 69 chr2 23713178 23713396 -226974458 + L1ME LINE L1 5382 5596 -962 2138 118 7 0 chr2 23713396 23713692 -226974162 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 23713692 23714120 -226973734 + L1ME LINE L1 5596 6083 -475 1504 192 0 8 chr2 23714124 23714379 -226973475 + AluJo SINE Alu 35 287 -25 2314 90 0 7 chr2 23714390 23714689 -226973165 + AluSg SINE Alu 1 297 -13 1084 199 0 5 chr2 23714689 23714900 -226972954 - MER46A DNA MER2_type -26 210 1 262 214 14 90 chr2 23714910 23715055 -226972799 + L1ME LINE L1 6097 6230 -330 2106 139 3 0 chr2 23715062 23715363 -226972491 + AluSx SINE Alu 1 302 -10 873 221 4 83 chr2 23715376 23715410 -226972444 - MER58A DNA MER1_type -2199 221 186 736 158 0 43 chr2 23715410 23715549 -226972305 + FLAM_C SINE Alu 1 133 0 873 221 4 83 chr2 23715549 23715754 -226972100 - MER58A DNA MER1_type -2234 186 1 28 61 0 0 chr2 23716003 23716052 -226971802 + AT_rich Low_complexity Low_complexity 1 49 0 2501 66 0 7 chr2 23716223 23716526 -226971328 - AluY SINE Alu -10 301 1 2271 98 0 0 chr2 23716576 23716904 -226970950 - AluSx SINE Alu 0 328 1 1740 166 37 7 chr2 23716970 23717266 -226970588 - AluJo SINE Alu -7 305 1 837 278 99 36 chr2 23717268 23717714 -226970140 - L1MC1 LINE L1 -1983 5825 5352 240 35 0 0 chr2 23717773 23717802 -226970052 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1198 176 10 0 chr2 23717806 23718005 -226969849 - AluJb SINE Alu -25 287 87 1265 181 75 80 chr2 23718097 23718149 -226969705 + MSTD LTR MaLR 1 52 -344 2250 96 0 7 chr2 23718149 23718450 -226969404 + AluSx SINE Alu 1 299 -13 1265 181 75 80 chr2 23718450 23718784 -226969070 + MSTD LTR MaLR 52 385 -11 2125 127 0 0 chr2 23719172 23719477 -226968377 + AluSq SINE Alu 1 305 0 281 156 0 0 chr2 23719531 23719576 -226968278 + AluJb SINE Alu 1 45 -258 315 374 96 0 chr2 23719683 23719902 -226967952 - MIR SINE MIR -21 241 2 21 0 0 0 chr2 23719959 23719980 -226967874 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 23720164 23720185 -226967669 + AT_rich Low_complexity Low_complexity 1 21 0 1693 188 20 0 chr2 23720402 23720694 -226967160 + AluJo SINE Alu 1 298 -14 899 201 6 6 chr2 23720885 23721059 -226966795 - FRAM SINE Alu -3 173 1 1347 167 4 28 chr2 23721559 23721810 -226966044 + AluJb SINE Alu 52 296 -16 186 71 0 0 chr2 23721810 23721838 -226966016 + (CAGAA)n Simple_repeat Simple_repeat 2 29 0 1969 119 53 0 chr2 23722503 23722788 -226965066 - AluSx SINE Alu -12 300 1 25 31 0 0 chr2 23723190 23723222 -226964632 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 23723441 23723480 -226964374 + AT_rich Low_complexity Low_complexity 1 39 0 26 50 0 0 chr2 23723677 23723717 -226964137 + AT_rich Low_complexity Low_complexity 1 40 0 2340 90 0 0 chr2 23723730 23724029 -226963825 + AluSq SINE Alu 1 299 -14 22 0 0 0 chr2 23724040 23724062 -226963792 + AT_rich Low_complexity Low_complexity 1 22 0 733 168 0 39 chr2 23724065 23724220 -226963634 + MER106B DNA MER1_type 1 149 -910 2363 91 7 3 chr2 23724607 23724914 -226962940 + AluSp SINE Alu 1 308 -5 488 314 65 90 chr2 23725474 23726028 -226961826 + L2 LINE L2 2182 2721 -593 1515 171 105 0 chr2 23726800 23727057 -226960797 - AluJo SINE Alu -28 284 1 21 0 0 0 chr2 23727385 23727406 -226960448 + AT_rich Low_complexity Low_complexity 1 21 0 2060 118 3 0 chr2 23728431 23728718 -226959136 + AluSg SINE Alu 21 308 -2 1946 154 7 0 chr2 23728769 23729068 -226958786 - AluJb SINE Alu -11 301 1 204 283 38 47 chr2 23729788 23729894 -226957960 + L2 LINE L2 791 895 -2419 2184 130 0 0 chr2 23730360 23730659 -226957195 - AluSg SINE Alu -11 299 1 419 159 0 34 chr2 23730661 23730749 -226957105 - AluJ/FRAM SINE Alu -8 304 220 631 197 7 56 chr2 23731844 23731986 -226955868 + MER2 DNA MER2_type 1 135 -210 444 195 18 2 chr2 23732022 23732204 -226955650 + MER2 DNA MER2_type 121 345 0 2098 131 0 0 chr2 23732388 23732686 -226955168 + AluSx SINE Alu 1 298 -14 715 177 47 5 chr2 23732728 23732920 -226954934 + L1M4 LINE L1 4966 5165 -981 1765 150 92 0 chr2 23732920 23733193 -226954661 + AluJb SINE Alu 1 298 -14 2297 95 0 0 chr2 23733258 23733554 -226954300 + AluY SINE Alu 1 296 -15 2104 119 3 23 chr2 23733703 23734005 -226953849 + AluSg SINE Alu 1 296 -14 2311 96 0 0 chr2 23734474 23734775 -226953079 - AluSc SINE Alu -8 301 1 2328 97 0 0 chr2 23734783 23735083 -226952771 - AluSg SINE Alu -10 300 1 2463 87 3 0 chr2 23735269 23735580 -226952274 + AluSp SINE Alu 1 312 -1 380 211 11 11 chr2 23735640 23735730 -226952124 + FLAM_C SINE Alu 29 118 -15 1624 107 4 43 chr2 23735734 23735968 -226951886 + AluSx SINE Alu 49 273 -39 642 104 0 0 chr2 23735969 23736065 -226951789 + (GGGGA)n Simple_repeat Simple_repeat 2 97 0 1879 123 55 3 chr2 23736072 23736365 -226951489 + AluSx SINE Alu 1 308 -4 483 153 382 0 chr2 23736392 23736523 -226951331 + AluJb SINE Alu 132 312 0 1727 185 62 58 chr2 23736525 23736562 -226951292 + L1ME LINE L1 5128 5163 -1003 2172 122 0 0 chr2 23736562 23736850 -226951004 + AluSx SINE Alu 1 288 -24 2306 67 0 3 chr2 23736860 23737173 -226950681 + AluY SINE Alu 1 312 0 1727 185 62 58 chr2 23737173 23737800 -226950054 + L1ME LINE L1 5171 5819 -347 1184 238 27 47 chr2 23737814 23738112 -226949742 + AluJo SINE Alu 2 293 -9 264 259 12 37 chr2 23738157 23738238 -226949616 + MIR SINE MIR 42 120 -88 2098 127 10 10 chr2 23738256 23738556 -226949298 + AluSx SINE Alu 1 300 -12 519 66 0 0 chr2 23738845 23738906 -226948948 - AluY SINE Alu -185 126 66 1209 97 0 0 chr2 23738906 23739060 -226948794 + AluY SINE Alu 142 295 -16 2213 92 13 7 chr2 23739841 23740144 -226947710 - AluSc SINE Alu -4 305 1 2088 126 3 0 chr2 23740209 23740494 -226947360 - AluSq SINE Alu -15 298 13 801 155 0 63 chr2 23740562 23740680 -226947174 + FLAM_A SINE Alu 1 110 -192 2036 134 27 0 chr2 23740680 23740979 -226946875 - AluSx SINE Alu -5 307 1 801 155 0 63 chr2 23740979 23741002 -226946852 + FLAM_A SINE Alu 110 133 -169 2247 94 3 7 chr2 23741010 23741318 -226946536 + AluY SINE Alu 1 307 -4 1868 168 0 19 chr2 23741547 23741856 -226945998 + AluJb SINE Alu 1 303 -9 2154 116 0 0 chr2 23742417 23742710 -226945144 + AluSq SINE Alu 1 293 -20 189 114 29 29 chr2 23743511 23743546 -226944308 - L2 LINE L2 -10 3303 3269 1899 144 0 3 chr2 23744495 23744779 -226943075 - AluJb SINE Alu -7 305 23 23 54 0 0 chr2 23744883 23744920 -226942934 + AT_rich Low_complexity Low_complexity 1 37 0 30 77 0 0 chr2 23745046 23745111 -226942743 + AT_rich Low_complexity Low_complexity 1 65 0 2427 85 0 0 chr2 23745205 23745511 -226942343 + AluY SINE Alu 1 306 -5 561 225 42 0 chr2 23745532 23745552 -226942302 - FLAM_A SINE Alu -186 125 107 1817 110 68 4 chr2 23745552 23745815 -226942039 + AluSg SINE Alu 2 281 -29 561 225 42 0 chr2 23745815 23745914 -226941940 - FLAM_A SINE Alu -204 107 1 22 0 0 0 chr2 23745923 23745945 -226941909 + AT_rich Low_complexity Low_complexity 1 22 0 2273 89 0 0 chr2 23747742 23748023 -226939831 - AluSx SINE Alu -31 281 1 2126 107 10 0 chr2 23748354 23748645 -226939209 + AluSx SINE Alu 1 294 -18 2501 70 0 3 chr2 23748647 23748959 -226938895 + AluY SINE Alu 1 311 0 242 324 86 0 chr2 23749146 23749251 -226938603 - MARNA DNA Mariner -77 509 396 * 764 304 79 22 chr2 23749189 23749557 -226938297 + MARNA DNA Mariner 125 513 -73 2297 107 3 0 chr2 23749735 23750034 -226937820 - AluSx SINE Alu -12 300 1 1888 119 22 53 chr2 23750199 23750517 -226937337 - AluSx SINE Alu -4 308 1 2528 44 0 3 chr2 23750879 23751176 -226936678 - AluY SINE Alu -13 298 3 2192 133 7 0 chr2 23751176 23751484 -226936370 - AluSx SINE Alu -2 310 1 25 31 0 0 chr2 23751695 23751727 -226936127 + AT_rich Low_complexity Low_complexity 1 32 0 1621 153 41 24 chr2 23752382 23752677 -226935177 - AluJo SINE Alu -12 300 1 2107 108 54 0 chr2 23752914 23753210 -226934644 + AluSp SINE Alu 1 312 -1 26 50 0 0 chr2 23753864 23753904 -226933950 + AT_rich Low_complexity Low_complexity 1 40 0 2023 109 10 30 chr2 23754751 23755055 -226932799 + AluSx SINE Alu 1 298 -14 4117 226 90 14 chr2 23755290 23755569 -226932285 - L1MC4 LINE L1 -191 7851 7595 1658 117 78 32 chr2 23755569 23755851 -226932003 + AluSx SINE Alu 1 295 -17 4117 226 90 14 chr2 23755851 23756688 -226931166 - L1MC4 LINE L1 -447 7595 6650 1400 187 97 4 chr2 23756689 23756957 -226930897 - AluJo SINE Alu -19 293 1 2370 166 37 21 chr2 23756959 23757387 -226930467 + MER4E LTR ERV1 343 777 -2 1467 162 29 76 chr2 23757435 23757581 -226930273 + AluJo SINE Alu 1 126 -186 2198 94 11 0 chr2 23757581 23757868 -226929986 + AluSq SINE Alu 1 290 -23 1467 162 29 76 chr2 23757868 23758036 -226929818 + AluJo SINE Alu 126 300 -12 2218 121 0 0 chr2 23758303 23758601 -226929253 - AluSg SINE Alu -10 300 3 2308 88 20 7 chr2 23758624 23758930 -226928924 - AluSg SINE Alu 0 310 1 620 165 55 0 chr2 23758937 23759080 -226928774 - FLAM_C SINE Alu 0 150 2 184 375 0 0 chr2 23759124 23759188 -226928666 - L3 LINE CR1 -7 1570 1507 547 238 156 31 chr2 23759195 23759355 -226928499 + MER5A DNA MER1_type 9 188 -1 22 0 0 0 chr2 23760339 23760361 -226927493 + AT_rich Low_complexity Low_complexity 1 22 0 288 221 168 0 chr2 23760380 23760475 -226927379 + MER103 DNA DNA 6 116 -50 319 283 201 19 chr2 23760740 23760899 -226926955 + MER5A DNA MER1_type 2 189 0 217 270 162 0 chr2 23761412 23761486 -226926368 - L2 LINE L2 -5 3267 3182 734 174 17 0 chr2 23761498 23761637 -226926217 + FLAM_C SINE Alu 1 141 0 1711 166 11 7 chr2 23761669 23761984 -226925870 + AluJo SINE Alu 1 316 0 300 53 0 0 chr2 23762654 23762692 -226925162 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1795 177 3 22 chr2 23763950 23764261 -226923593 + AluJb SINE Alu 1 305 -7 227 290 178 37 chr2 23764491 23764598 -226923256 - L2 LINE L2 0 3272 3151 318 231 111 60 chr2 23764649 23764766 -226923088 + L1ME LINE L1 5541 5637 -484 2129 117 0 13 chr2 23764769 23765069 -226922785 + AluSx SINE Alu 1 296 -16 1048 39 0 0 chr2 23765191 23765320 -226922534 - L1P LINE L1 -3471 2675 2547 15493 30 12 1 chr2 23765320 23767859 -226919995 + L1PA3 LINE L1 3628 6155 0 954 161 8 4 chr2 23767919 23768127 -226919727 + AluJb SINE Alu 2 286 -26 315 267 70 0 chr2 23768132 23768218 -226919636 - L1MC4 LINE L1 -1339 6703 6612 1660 179 19 16 chr2 23768567 23768874 -226918980 - AluJo SINE Alu 0 312 5 2391 86 3 3 chr2 23768888 23769192 -226918662 - AluSp SINE Alu -9 304 1 2075 125 3 0 chr2 23769300 23769588 -226918266 + AluSx SINE Alu 1 289 -23 2201 93 24 0 chr2 23769658 23769948 -226917906 + AluSp SINE Alu 1 297 -16 1895 176 3 3 chr2 23769985 23770297 -226917557 + AluJb SINE Alu 1 312 0 180 77 0 0 chr2 23770309 23770335 -226917519 + (AGGGGG)n Simple_repeat Simple_repeat 5 30 0 2197 116 0 7 chr2 23770413 23770707 -226917147 + AluSx SINE Alu 9 300 -12 1030 233 43 16 chr2 23770718 23770927 -226916927 + L1M4 LINE L1 2627 2848 -3298 1719 161 16 48 chr2 23770927 23771243 -226916611 + AluJo SINE Alu 1 306 -6 1030 233 43 16 chr2 23771243 23771338 -226916516 + L1M4 LINE L1 2848 2939 -3207 1896 142 0 17 chr2 23771421 23771733 -226916121 + AluSx SINE Alu 1 307 0 225 250 75 25 chr2 23771837 23771917 -226915937 + L1 LINE L1 2660 2743 -3403 2321 89 7 13 chr2 23772066 23772370 -226915484 + AluSx SINE Alu 1 302 -10 823 142 14 7 chr2 23772545 23772686 -226915168 + FRAM SINE Alu 13 154 -22 560 152 191 9 chr2 23772701 23772806 -226915048 + FLAM_C SINE Alu 3 126 -17 239 229 0 0 chr2 23772980 23773028 -226914826 - MER112 DNA MER1_type -183 77 30 348 317 114 46 chr2 23773204 23773270 -226914584 + L1ME3A LINE L1 5461 5521 -649 2364 56 7 13 chr2 23773270 23773572 -226914282 + AluY SINE Alu 1 300 -11 348 317 114 46 chr2 23773572 23773899 -226913955 + L1ME3A LINE L1 5521 5881 -289 242 175 0 0 chr2 23774068 23774108 -226913746 + MER94 DNA DNA 95 134 0 419 197 13 26 chr2 23774216 23774292 -226913562 - FRAM/FAM SINE Alu -103 73 1 2346 88 10 3 chr2 23774296 23774603 -226913251 - AluSg SINE Alu -1 309 1 253 254 91 55 chr2 23775599 23775709 -226912145 + L2 LINE L2 3113 3226 -46 252 211 88 0 chr2 23775741 23775798 -226912056 - MER91C DNA MER1_type -38 102 41 198 245 0 38 chr2 23775814 23775867 -226911987 - L2 LINE L2 -80 3233 3183 195 42 0 0 chr2 23775882 23775906 -226911948 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 787 180 0 8 chr2 23776358 23776486 -226911368 + FLAM_A SINE Alu 1 127 -6 2193 93 40 0 chr2 23776489 23776790 -226911064 + AluSp SINE Alu 1 313 0 1629 185 7 20 chr2 23776797 23777089 -226910765 + AluJo SINE Alu 1 288 -24 207 265 0 0 chr2 23777126 23777194 -226910660 + A-rich Low_complexity Low_complexity 3 70 0 460 261 111 13 chr2 23777559 23777712 -226910142 + MIR SINE MIR 89 256 -6 827 171 0 16 chr2 23777773 23777902 -226909952 + FLAM_C SINE Alu 1 127 -6 1775 160 32 0 chr2 23777984 23778265 -226909589 + AluJb SINE Alu 1 290 -22 2128 130 0 7 chr2 23778273 23778574 -226909280 + AluSq SINE Alu 1 299 -14 2156 118 0 0 chr2 23778581 23778878 -226908976 + AluSx SINE Alu 1 297 -15 212 308 128 0 chr2 23778880 23778958 -226908896 - L2 LINE L2 -18 3295 3208 438 215 0 114 chr2 23779212 23779361 -226908493 - L2 LINE L2 0 3313 3182 1695 182 3 3 chr2 23779635 23779942 -226907912 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr2 23780748 23780774 -226907080 + AT_rich Low_complexity Low_complexity 1 26 0 422 236 9 0 chr2 23781230 23781336 -226906518 + L1MA10 LINE L1 5198 5304 -842 458 120 213 0 chr2 23781353 23781428 -226906426 + FRAM SINE Alu 71 161 -15 4371 156 64 42 chr2 23781453 23782363 -226905491 + L1MA10 LINE L1 5376 6305 -29 2438 43 7 3 chr2 23782612 23782913 -226904941 + AluY SINE Alu 1 302 -9 2127 135 0 0 chr2 23786595 23786953 -226900901 + AluSx SINE Alu 1 358 0 2354 80 0 3 chr2 23787008 23787296 -226900558 + AluSx SINE Alu 14 300 -12 798 148 16 0 chr2 23787710 23787832 -226900022 + FLAM_C SINE Alu 2 125 -18 865 143 0 0 chr2 23787842 23787968 -226899886 - AluJb SINE Alu -30 282 157 862 166 13 38 chr2 23787973 23788130 -226899724 + AluJb SINE Alu 154 306 -6 2312 96 3 3 chr2 23788135 23788437 -226899417 + AluSq SINE Alu 5 306 -7 2215 112 0 0 chr2 23788593 23788887 -226898967 - AluY SINE Alu -15 296 3 532 103 0 0 chr2 23788919 23788987 -226898867 + FLAM SINE Alu 63 130 -13 961 188 102 109 chr2 23789278 23789582 -226898272 + AluJo SINE Alu 1 302 0 1661 141 58 14 chr2 23789586 23789863 -226897991 + AluSg1 SINE Alu 1 289 -20 1789 158 23 16 chr2 23789867 23790171 -226897683 + AluSx SINE Alu 1 306 -6 2307 112 0 0 chr2 23790432 23790736 -226897118 + AluSg SINE Alu 1 304 -6 2133 122 0 29 chr2 23790739 23791050 -226896804 + AluSg SINE Alu 1 302 -8 343 367 100 4 chr2 23791275 23791515 -226896339 + L1MEd LINE L1 459 721 -5398 2152 107 3 3 chr2 23791527 23791818 -226896036 + AluY SINE Alu 3 293 -18 22 0 0 0 chr2 23791818 23791840 -226896014 + AT_rich Low_complexity Low_complexity 1 22 0 2377 103 3 0 chr2 23791926 23792238 -226895616 + AluSp SINE Alu 1 313 0 1122 166 6 0 chr2 23792272 23792453 -226895401 + FRAM SINE Alu 1 176 0 2269 99 17 0 chr2 23792635 23792929 -226894925 + AluSx SINE Alu 1 299 -13 947 159 143 0 chr2 23792947 23793129 -226894725 - MER3 DNA MER1_type -1 208 1 2240 123 0 3 chr2 23793493 23793795 -226894059 + AluSx SINE Alu 1 301 -11 3277 166 25 86 chr2 23793795 23794470 -226893384 + L1MB4 LINE L1 4996 5711 -469 1902 131 7 7 chr2 23794470 23794783 -226893071 + AluSx SINE Alu 2 314 0 3277 166 25 86 chr2 23794783 23795129 -226892725 + L1MB4 LINE L1 5711 5954 -226 727 193 0 15 chr2 23795129 23795264 -226892590 + FLAM_C SINE Alu 1 133 0 3277 166 25 86 chr2 23795264 23795309 -226892545 + L1MB4 LINE L1 5954 6000 -180 491 179 0 21 chr2 23795329 23795424 -226892430 + L1M4 LINE L1 4012 4104 -2042 2309 90 0 0 chr2 23795424 23795712 -226892142 - AluSx SINE Alu -24 288 1 824 168 0 28 chr2 23795718 23795861 -226891993 - FLAM_C SINE Alu -4 139 1 597 141 0 0 chr2 23795865 23795964 -226891890 + L1M4 LINE L1 4103 4201 -1945 1206 180 18 40 chr2 23795964 23796186 -226891668 + AluJo SINE Alu 1 217 -95 2192 169 57 132 chr2 23796224 23796465 -226891389 + L1M4 LINE L1 4258 4516 -1630 2067 136 48 3 chr2 23796465 23796795 -226891059 - MER7A DNA MER2_type -2 344 2 2192 169 57 132 chr2 23796795 23796885 -226890969 + L1M4 LINE L1 4516 4611 -1535 2343 102 0 0 chr2 23796885 23797178 -226890676 + AluSp SINE Alu 1 293 -20 2192 169 57 132 chr2 23797178 23797565 -226890289 + L1M4 LINE L1 4611 4923 -1223 422 174 0 23 chr2 23797798 23797884 -226889970 - MER92B LTR ERV1 -7 629 546 279 186 51 0 chr2 23797888 23797947 -226889907 - MER92B LTR ERV1 -50 586 525 * 1605 198 46 85 chr2 23797943 23798529 -226889325 - MER92B LTR ERV1 -4 632 70 1985 54 8 0 chr2 23798529 23798770 -226889084 + AluSq SINE Alu 1 243 -70 21 36 0 0 chr2 23799135 23799163 -226888691 + AT_rich Low_complexity Low_complexity 1 28 0 205 309 203 8 chr2 23799185 23799308 -226888546 - L2 LINE L2 -5 3267 3121 2088 117 0 23 chr2 23799311 23799620 -226888234 + AluSx SINE Alu 1 302 -10 187 298 110 53 chr2 23799712 23799940 -226887914 - L2 LINE L2 -216 3056 2816 2285 97 17 0 chr2 23799940 23800239 -226887615 - AluSx SINE Alu -8 304 1 2172 91 28 3 chr2 23800488 23800775 -226887079 - AluSg SINE Alu -16 294 1 357 277 208 0 chr2 23800779 23800909 -226886945 - L2 LINE L2 -604 2710 2554 2056 137 3 13 chr2 23801012 23801311 -226886543 - AluSp SINE Alu -17 296 1 25 0 0 0 chr2 23803300 23803325 -226884529 + AT_rich Low_complexity Low_complexity 1 25 0 2031 146 0 19 chr2 23803336 23803652 -226884202 - AluSx SINE Alu -2 310 1 222 37 0 0 chr2 23803664 23803691 -226884163 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1969 131 7 14 chr2 23803693 23803841 -226884013 - AluSx SINE Alu -31 281 134 2080 110 33 10 chr2 23803841 23804141 -226883713 - AluSc SINE Alu -2 307 1 1969 131 7 14 chr2 23804141 23804275 -226883579 - AluSx SINE Alu -178 134 1 1718 193 7 3 chr2 23804408 23804709 -226883145 - AluJo SINE Alu -10 302 1 2251 104 0 10 chr2 23805367 23805675 -226882179 - AluSq SINE Alu -8 305 1 2410 84 3 0 chr2 23805763 23806059 -226881795 - AluSq SINE Alu -2 311 15 379 296 64 0 chr2 23806149 23806274 -226881580 - MIR SINE MIR -74 188 56 2048 108 13 67 chr2 23806466 23806782 -226881072 - AluSx SINE Alu -13 299 1 1850 122 84 3 chr2 23806811 23807098 -226880756 + AluY SINE Alu 2 311 0 2198 125 0 0 chr2 23807113 23807408 -226880446 + AluSx SINE Alu 1 295 -17 496 187 0 0 chr2 23807408 23807499 -226880355 - L1PB4 LINE L1 -5 6151 6061 181 0 0 65 chr2 23807798 23807829 -226880025 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 2004 122 3 3 chr2 23807836 23808123 -226879731 - AluSx SINE Alu -25 287 1 1809 121 92 0 chr2 23808125 23808398 -226879456 - AluSx SINE Alu -14 298 1 941 171 52 5 chr2 23808408 23808601 -226879253 - L1MA6 LINE L1 -5 6295 6094 431 217 9 43 chr2 23808661 23808776 -226879078 + L2 LINE L2 3186 3296 -17 459 0 0 0 chr2 23808833 23808884 -226878970 + (TA)n Simple_repeat Simple_repeat 1 51 0 1993 138 7 0 chr2 23808885 23809175 -226878679 - AluSq SINE Alu -16 297 6 2407 104 0 0 chr2 23809378 23809686 -226878168 - AluSx SINE Alu -4 308 1 1744 167 7 27 chr2 23809692 23809854 -226878000 - AluJo SINE Alu -19 293 138 2158 130 3 3 chr2 23809854 23810162 -226877692 - AluSg SINE Alu -2 308 1 1744 167 7 27 chr2 23810162 23810298 -226877556 - AluJo SINE Alu -174 138 1 2148 217 68 48 chr2 23810678 23811429 -226876425 - L1MC5 LINE L1 -37 7924 7159 1117 90 0 0 chr2 23811429 23811573 -226876281 - AluSp/q SINE Alu -10 303 160 1598 174 16 13 chr2 23811573 23811890 -226875964 - L1MB4 LINE L1 -158 6022 5705 1540 148 4 29 chr2 23811891 23812169 -226875685 - L1MB4 LINE L1 -592 5588 5318 1023 144 6 24 chr2 23812176 23812343 -226875511 - AluJb SINE Alu -13 299 136 2389 94 0 0 chr2 23812351 23812650 -226875204 - AluSc SINE Alu -10 299 1 394 286 12 25 chr2 23812676 23812837 -226875017 - L1M4 LINE L1 -6383 159 1 2100 169 9 0 chr2 23812918 23813262 -226874592 - MER7A DNA MER2_type -1 345 1 1681 170 4 0 chr2 23813324 23813583 -226874271 - AluSx SINE Alu -52 260 1 23 0 0 0 chr2 23813588 23813611 -226874243 + AT_rich Low_complexity Low_complexity 1 23 0 1117 216 57 63 chr2 23813617 23813756 -226874098 - L1MC4 LINE L1 -979 7063 6925 2098 117 6 19 chr2 23813756 23814072 -226873782 - AluSx SINE Alu 0 312 1 1117 216 57 63 chr2 23814072 23814283 -226873571 - L1MC4 LINE L1 -1117 6925 6715 1098 209 137 14 chr2 23814303 23814581 -226873273 + MER2 DNA MER2_type 6 317 -28 682 199 0 57 chr2 23814587 23814728 -226873126 - AluJo/FRAM SINE Alu -46 266 134 1770 133 0 4 chr2 23814729 23814970 -226872884 - AluSx SINE Alu -19 293 54 2215 92 3 0 chr2 23814972 23815255 -226872599 + AluSp SINE Alu 1 284 -29 21 0 0 0 chr2 23815262 23815283 -226872571 + AT_rich Low_complexity Low_complexity 1 21 0 840 220 62 0 chr2 23815283 23815460 -226872394 - AluJo SINE Alu -113 199 12 23 33 0 0 chr2 23815966 23815996 -226871858 + AT_rich Low_complexity Low_complexity 1 30 0 511 251 36 18 chr2 23816084 23816251 -226871603 + MIR SINE MIR 10 179 -83 1446 210 48 7 chr2 23816257 23816552 -226871302 - AluJo SINE Alu -5 307 1 2301 109 0 10 chr2 23816629 23816942 -226870912 + AluSx SINE Alu 1 310 -2 2587 179 88 37 chr2 23816950 23817390 -226870464 - MER68 LTR ERV1 0 562 89 2543 62 0 13 chr2 23817390 23817698 -226870156 + AluY SINE Alu 1 304 -7 2587 179 88 37 chr2 23817698 23817792 -226870062 - MER68 LTR ERV1 -473 89 1 749 200 0 7 chr2 23817852 23818002 -226869852 - L1MB8 LINE L1 -6 6172 6024 1757 158 3 10 chr2 23818159 23818450 -226869404 - AluSx SINE Alu -23 289 1 848 101 0 54 chr2 23818453 23818601 -226869253 - L1MB8 LINE L1 -211 5967 5828 2431 98 0 0 chr2 23818612 23818918 -226868936 - AluSq SINE Alu -7 306 1 2413 98 0 0 chr2 23819062 23819368 -226868486 - AluSc SINE Alu -3 306 1 2399 90 0 3 chr2 23819368 23819668 -226868186 - AluSx SINE Alu -13 299 1 549 156 24 102 chr2 23819891 23820037 -226867817 + L1MB1 LINE L1 5172 5305 -841 2214 97 45 87 chr2 23820037 23820117 -226867737 - THE1B LTR MaLR 0 364 282 2320 89 3 16 chr2 23820117 23820431 -226867423 - AluSp SINE Alu -2 311 2 2214 97 45 87 chr2 23820431 23820730 -226867124 - THE1B LTR MaLR -82 282 1 549 156 24 102 chr2 23820730 23820750 -226867104 + L1MB1 LINE L1 5305 5325 -821 1544 90 0 0 chr2 23820758 23820947 -226866907 + AluSg SINE Alu 2 190 -120 401 125 0 50 chr2 23820947 23821027 -226866827 + AluSg SINE Alu 236 311 -1 1739 127 71 56 chr2 23821029 23821369 -226866485 + L1MB1 LINE L1 5335 5679 -655 1680 178 3 23 chr2 23821369 23821673 -226866181 + AluJo SINE Alu 1 298 -14 1277 150 0 31 chr2 23821684 23821739 -226866115 + L1MB1 LINE L1 5758 5813 -355 2359 89 3 0 chr2 23821739 23822032 -226865822 - AluSp SINE Alu -19 294 1 1277 150 0 31 chr2 23822032 23822296 -226865558 + L1MB1 LINE L1 5813 6167 -1 738 200 15 0 chr2 23822385 23822520 -226865334 + AluJb SINE Alu 2 138 -174 1173 133 0 17 chr2 23822530 23822703 -226865151 - AluJo SINE Alu -142 170 1 3145 249 19 8 chr2 23822703 23823551 -226864303 - L1M4 LINE L1 -1959 4187 3331 2316 92 7 0 chr2 23823662 23823957 -226863897 - AluSc SINE Alu -12 297 1 2657 52 3 0 chr2 23823966 23824273 -226863581 - AluY SINE Alu -3 308 1 1662 157 63 20 chr2 23824281 23824580 -226863274 - AluJb SINE Alu 0 312 1 238 103 0 69 chr2 23824614 23824672 -226863182 + (CTACT)n Simple_repeat Simple_repeat 4 57 0 198 130 0 130 chr2 23824725 23824771 -226863083 + L2 LINE L2 3267 3306 -7 411 301 128 9 chr2 23824981 23825207 -226862647 - MIR SINE MIR -8 254 2 682 158 127 70 chr2 23825453 23825611 -226862243 - FAM SINE Alu -4 171 5 803 219 98 5 chr2 23825638 23825843 -226862011 + MIR SINE MIR 1 224 -38 2323 81 10 3 chr2 23825918 23826213 -226861641 + AluY SINE Alu 2 298 -13 2496 91 0 0 chr2 23826405 23826714 -226861140 - AluSc SINE Alu 0 309 1 1348 181 35 86 chr2 23826778 23826916 -226860938 + AluJo SINE Alu 1 144 -168 2045 119 0 0 chr2 23826916 23827184 -226860670 - AluSc SINE Alu -41 268 1 1348 181 35 86 chr2 23827184 23827360 -226860494 + AluJo SINE Alu 144 299 -13 1660 182 26 13 chr2 23827533 23827835 -226860019 + AluJb SINE Alu 1 306 -6 813 178 8 130 chr2 23827859 23828025 -226859829 + MER20 DNA MER1_type 1 129 -90 3377 116 44 31 chr2 23828025 23828543 -226859311 - MER1A DNA MER1_type 0 527 3 813 178 8 130 chr2 23828543 23828623 -226859231 + MER20 DNA MER1_type 129 217 -2 295 197 66 123 chr2 23828992 23829022 -226858832 + Charlie1a DNA MER1_type 49 79 -2682 1728 156 4 7 chr2 23829022 23829298 -226858556 - AluJo SINE Alu -22 290 16 295 197 66 123 chr2 23829298 23829357 -226858497 + Charlie1a DNA MER1_type 79 132 -2629 1828 138 4 4 chr2 23829357 23829618 -226858236 + AluJo SINE Alu 18 278 -34 295 197 66 123 chr2 23829618 23829649 -226858205 + Charlie1a DNA MER1_type 132 163 -1292 1767 186 65 71 chr2 23829650 23829757 -226858097 + Charlie1a DNA MER1_type 112 218 -2543 970 178 113 14 chr2 23829757 23829970 -226857884 + MER46A DNA MER2_type 3 236 0 1767 186 65 71 chr2 23829970 23830065 -226857789 + Charlie1a DNA MER1_type 218 312 -2449 2383 88 0 0 chr2 23830065 23830361 -226857493 + AluSg SINE Alu 1 296 -14 1767 186 65 71 chr2 23830361 23830571 -226857283 + Charlie1a DNA MER1_type 312 522 -2239 2070 104 4 4 chr2 23830571 23830841 -226857013 - AluSg SINE Alu -40 270 1 2427 90 0 6 chr2 23830850 23831162 -226856692 - AluY SINE Alu -1 310 1 2250 97 10 0 chr2 23831162 23831452 -226856402 - AluSg SINE Alu -17 293 1 1767 186 65 71 chr2 23831452 23831521 -226856333 + Charlie1a DNA MER1_type 528 603 -852 923 75 8 8 chr2 23831621 23831741 -226856113 - AluY SINE Alu -191 120 1 2365 67 0 20 chr2 23831770 23832070 -226855784 - AluY SINE Alu -17 294 1 1788 219 45 36 chr2 23832080 23832120 -226855734 + Charlie1a DNA MER1_type 630 668 -2093 2038 152 7 3 chr2 23832120 23832429 -226855425 + AluSx SINE Alu 1 310 -2 1788 219 45 36 chr2 23832429 23832941 -226854913 + Charlie1a DNA MER1_type 668 1187 -268 763 264 57 24 chr2 23833011 23833061 -226854793 - HAL1 LINE L1 -56 2451 2404 2059 118 45 0 chr2 23833061 23833350 -226854504 - AluSp SINE Alu -11 302 1 763 264 57 24 chr2 23833350 23833633 -226854221 - HAL1 LINE L1 -103 2404 2107 2231 84 99 0 chr2 23833846 23834169 -226853685 - THE1A LTR MaLR 0 355 1 875 137 8 0 chr2 23834173 23834304 -226853550 - FLAM_C SINE Alu -11 132 1 1132 188 144 0 chr2 23834506 23834762 -226853092 + AluJo SINE Alu 2 294 -8 2175 112 7 7 chr2 23834786 23835089 -226852765 + AluSp SINE Alu 5 307 -6 1941 151 14 0 chr2 23835260 23835551 -226852303 - AluSx SINE Alu -17 295 1 368 120 0 0 chr2 23835717 23835767 -226852087 + MER57A LTR ERV1 295 344 -59 2457 67 0 32 chr2 23835786 23836101 -226851753 + AluY SINE Alu 2 306 -5 2144 116 0 3 chr2 23836105 23836399 -226851455 + AluSg SINE Alu 1 293 -17 2226 101 7 7 chr2 23836486 23836782 -226851072 + AluSx SINE Alu 1 296 -16 286 289 0 30 chr2 23836784 23836919 -226850935 - L1ME4a LINE L1 -80 6041 5911 1603 178 0 8 chr2 23837035 23837294 -226850560 - AluJo SINE Alu -55 257 1 683 171 48 115 chr2 23837357 23837609 -226850245 - L1MB7 LINE L1 -5 6179 5945 2400 152 38 22 chr2 23837639 23838037 -226849817 - L1ME4a LINE L1 -448 5736 5322 2100 121 4 0 chr2 23838037 23838350 -226849504 - AluSx SINE Alu 0 314 1 2400 152 38 22 chr2 23838350 23838479 -226849375 - L1ME4a LINE L1 -862 5322 5197 1663 171 19 47 chr2 23838610 23838931 -226848923 + AluJo SINE Alu 1 312 0 2130 111 21 0 chr2 23839035 23839323 -226848531 + AluJb SINE Alu 1 294 -18 1178 95 24 86 chr2 23839341 23839503 -226848351 + MER30 DNA MER1_type 1 149 -81 2425 63 0 27 chr2 23839503 23839804 -226848050 + AluY SINE Alu 3 295 -16 1178 95 24 86 chr2 23839804 23839851 -226848003 + MER30 DNA MER1_type 149 197 -33 808 132 66 0 chr2 23839941 23840062 -226847792 + FLAM_C SINE Alu 5 133 -10 2349 74 0 3 chr2 23840647 23840944 -226846910 + AluSp SINE Alu 1 296 -17 2161 114 0 0 chr2 23841101 23841399 -226846455 - AluSx SINE Alu -14 298 1 28 48 0 0 chr2 23842012 23842054 -226845800 + AT_rich Low_complexity Low_complexity 1 42 0 1454 170 3 113 chr2 23842332 23842661 -226845193 - AluJo SINE Alu -9 293 1 2039 117 0 10 chr2 23842666 23842975 -226844879 - AluSx SINE Alu -6 306 1 463 97 0 0 chr2 23843026 23843088 -226844766 - Alu SINE Alu -15 297 236 1500 172 46 14 chr2 23843137 23843422 -226844432 + AluJb SINE Alu 1 294 -18 2326 52 0 7 chr2 23843450 23843767 -226844087 + AluY SINE Alu 1 315 0 23 54 0 0 chr2 23843837 23843874 -226843980 + AT_rich Low_complexity Low_complexity 1 37 0 301 194 78 10 chr2 23843922 23844025 -226843829 - L1ME4a LINE L1 -48 6073 5964 2229 92 10 0 chr2 23844037 23844331 -226843523 - AluSx SINE Alu -15 297 1 851 162 0 103 chr2 23844348 23844533 -226843321 + AluJb SINE Alu 134 299 -13 24 32 0 0 chr2 23844582 23844613 -226843241 + AT_rich Low_complexity Low_complexity 1 31 0 2378 72 0 0 chr2 23844920 23845224 -226842630 + AluY SINE Alu 1 304 -7 2104 129 0 3 chr2 23845265 23845574 -226842280 + AluSg SINE Alu 1 308 -2 1773 242 121 4 chr2 23845575 23846138 -226841716 - L1MC4 LINE L1 -142 7900 7272 180 0 0 0 chr2 23846168 23846188 -226841666 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 1069 278 125 3 chr2 23846201 23846546 -226841308 - L1MC4 LINE L1 -985 7057 6671 551 93 52 10 chr2 23846557 23846654 -226841200 + L1 LINE L1 3589 3689 -2457 186 43 0 0 chr2 23846670 23846693 -226841161 + (TG)n Simple_repeat Simple_repeat 2 24 0 712 139 0 6 chr2 23846722 23846962 -226840892 - AluJb SINE Alu -7 305 15 266 132 0 8 chr2 23847063 23847248 -226840606 - AluJb SINE Alu -66 236 1 489 257 29 40 chr2 23847255 23847316 -226840538 - L1MC4 LINE L1 -1414 6628 6568 1825 155 0 7 chr2 23847316 23847606 -226840248 + AluJb SINE Alu 1 288 -24 489 257 29 40 chr2 23847606 23847720 -226840134 - L1MC4 LINE L1 -1474 6568 6443 2076 105 0 23 chr2 23848180 23848484 -226839370 + AluSx SINE Alu 1 297 -15 394 216 108 0 chr2 23848491 23848602 -226839252 + L1ME3A LINE L1 5827 5949 -221 478 266 35 6 chr2 23848820 23848989 -226838865 - L1MCa LINE L1 -3558 2868 2695 316 179 107 24 chr2 23848991 23849075 -226838779 - MER34C LTR ERV1 0 585 495 28 0 0 26 chr2 23849083 23849102 -226838752 + AT_rich Low_complexity Low_complexity 1 19 -19 237 65 0 0 chr2 23849102 23849133 -226838721 + (CA)n Simple_repeat Simple_repeat 2 32 0 28 0 0 26 chr2 23849133 23849152 -226838702 + AT_rich Low_complexity Low_complexity 19 38 0 1995 124 3 13 chr2 23849152 23849467 -226838387 - AluSx SINE Alu 0 312 1 184 29 29 29 chr2 23849469 23849503 -226838351 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1417 103 9 60 chr2 23849503 23849663 -226838191 - AluSg/x SINE Alu -27 285 139 2322 80 0 0 chr2 23849663 23849965 -226837889 - AluSc SINE Alu -7 302 1 1417 103 9 60 chr2 23849965 23850037 -226837817 - AluSg/x SINE Alu -173 139 65 818 204 38 80 chr2 23850037 23850301 -226837553 - MER39 LTR ERV1 -188 519 267 240 238 37 32 chr2 23850277 23850379 -226837475 - MER39 LTR ERV1 -538 106 6 * 636 239 32 40 chr2 23850384 23850631 -226837223 - L1MCa LINE L1 -3730 2696 2452 22 0 0 0 chr2 23851100 23851122 -226836732 + AT_rich Low_complexity Low_complexity 1 22 0 238 139 0 0 chr2 23851142 23851178 -226836676 - Alu SINE Alu -266 36 1 1945 120 16 13 chr2 23851370 23851679 -226836175 - AluSg SINE Alu 0 310 1 431 267 120 45 chr2 23851702 23852330 -226835524 - L1MCa LINE L1 -4564 1862 1129 238 210 16 32 chr2 23852951 23853013 -226834841 - L1MCa LINE L1 -5855 561 501 343 150 100 25 chr2 23853072 23853134 -226834720 - Tigger5 DNA MER2_type -1 2322 2251 2229 57 0 7 chr2 23853134 23853416 -226834438 + AluY SINE Alu 30 309 -2 343 150 100 25 chr2 23853416 23853433 -226834421 - Tigger5 DNA MER2_type -72 2251 2237 23 33 0 0 chr2 23853579 23853609 -226834245 + AT_rich Low_complexity Low_complexity 1 30 0 1098 139 0 17 chr2 23853722 23853902 -226833952 - AluSg/x SINE Alu -2 308 132 2108 116 3 3 chr2 23853902 23854203 -226833651 - AluSx SINE Alu -11 301 1 2334 91 7 0 chr2 23854300 23854609 -226833245 - AluSq SINE Alu 0 313 3 1727 142 35 10 chr2 23854611 23854921 -226832933 - 7SLRNA srpRNA srpRNA -1 319 2 801 158 0 0 chr2 23854926 23855046 -226832808 - FLAM_C SINE Alu -11 132 13 305 267 46 53 chr2 23855046 23855177 -226832677 - L1M4 LINE L1 -2879 3267 3138 2117 79 14 4 chr2 23855275 23855582 -226832272 - AluSc SINE Alu 0 310 1 2208 110 3 0 chr2 23855647 23855948 -226831906 - AluSq SINE Alu -11 302 1 343 276 151 5 chr2 23856077 23856269 -226831585 - L2 LINE L2 -5 3308 3089 2032 114 3 7 chr2 23856274 23856573 -226831281 + AluSx SINE Alu 1 298 -14 640 194 16 23 chr2 23856573 23856702 -226831152 - AluSg/x SINE Alu -19 293 166 502 194 83 0 chr2 23856962 23857070 -226830784 + HsTC2 DNA Tc2 2 118 -1780 657 199 107 0 chr2 23857276 23857407 -226830447 + FRAM SINE Alu 2 146 -30 1910 129 0 0 chr2 23858098 23858411 -226829443 + AluSc SINE Alu 1 313 0 725 175 0 8 chr2 23858419 23858539 -226829315 + FLAM_C SINE Alu 2 120 -23 26 30 0 0 chr2 23858539 23858572 -226829282 + AT_rich Low_complexity Low_complexity 1 33 0 2119 111 7 0 chr2 23858820 23859126 -226828728 - AluSp SINE Alu -5 308 1 48 0 0 0 chr2 23859465 23859513 -226828341 + AT_rich Low_complexity Low_complexity 1 48 0 2024 96 7 10 chr2 23859514 23859806 -226828048 + AluSc SINE Alu 1 291 -18 866 134 15 0 chr2 23859829 23859963 -226827891 + AluJb SINE Alu 1 136 -176 1884 136 0 0 chr2 23859963 23860235 -226827619 + AluSx SINE Alu 7 278 -34 1999 110 10 0 chr2 23860251 23860543 -226827311 - AluSq SINE Alu -18 295 1 1201 198 87 7 chr2 23860543 23860831 -226827023 - Charlie1b DNA MER1_type -208 315 5 375 269 85 21 chr2 23860854 23860995 -226826859 - MER5B DNA MER1_type 0 178 29 180 0 0 0 chr2 23861558 23861578 -226826276 + (A)n Simple_repeat Simple_repeat 1 20 0 2250 90 0 3 chr2 23862207 23862507 -226825347 + AluSc SINE Alu 1 299 -10 1008 162 131 22 chr2 23863225 23863447 -226824407 + 7SLRNA srpRNA srpRNA 11 256 -64 2228 110 0 0 chr2 23863469 23863778 -226824076 + AluSg SINE Alu 1 309 -1 2310 87 0 3 chr2 23864040 23864340 -226823514 - AluSq SINE Alu -14 299 1 679 203 0 8 chr2 23864496 23864629 -226823225 + FLAM_C SINE Alu 2 133 0 908 240 110 16 chr2 23864832 23865078 -226822776 - MLT1J LTR MaLR 0 511 243 3702 160 113 57 chr2 23865091 23865165 -226822689 - L1MB8 LINE L1 -1 6177 6109 1954 90 42 3 chr2 23865165 23865453 -226822401 + AluSx SINE Alu 9 307 -5 3702 160 113 57 chr2 23865453 23866443 -226821411 - L1MB8 LINE L1 -69 6109 5043 1188 102 0 0 chr2 23866455 23866621 -226821233 - AluSg/x SINE Alu -8 304 139 3862 155 45 31 chr2 23866692 23867410 -226820444 - MER50 LTR ERV1 0 734 7 344 215 41 50 chr2 23867412 23867533 -226820321 - MLT1J LTR MaLR -286 225 106 848 161 7 7 chr2 23868828 23868977 -226818877 - MER5A DNA MER1_type -27 162 14 2396 81 0 0 chr2 23869036 23869345 -226818509 + AluSx SINE Alu 1 309 -3 824 161 67 0 chr2 23870333 23870482 -226817372 - AluJo SINE Alu -33 279 121 21 0 0 0 chr2 23870482 23870503 -226817351 + AT_rich Low_complexity Low_complexity 1 21 0 653 135 31 0 chr2 23870510 23870606 -226817248 - U6 snRNA snRNA -5 102 4 787 181 0 21 chr2 23870606 23870750 -226817104 - AluJo SINE Alu -168 144 4 325 98 0 33 chr2 23870751 23870812 -226817042 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 2224 96 3 0 chr2 23870823 23871124 -226816730 - AluSx SINE Alu -10 302 1 292 336 52 0 chr2 23871171 23871305 -226816549 + L2 LINE L2 2431 2571 -743 216 0 0 0 chr2 23871602 23871626 -226816228 + (T)n Simple_repeat Simple_repeat 1 24 0 1861 114 11 0 chr2 23871885 23872149 -226815705 + AluSx SINE Alu 9 275 -37 302 327 30 35 chr2 23872674 23872873 -226814981 - L2 LINE L2 -1334 1980 1783 1543 169 19 50 chr2 23875241 23875561 -226812293 - AluJb SINE Alu -2 310 1 2013 128 3 6 chr2 23875571 23875883 -226811971 - AluSx SINE Alu -1 311 1 375 252 43 142 chr2 23875912 23876214 -226811640 - L1MC4a LINE L1 -1756 6052 5781 1210 65 126 75 chr2 23876216 23876267 -226811587 + MER30 DNA MER1_type 6 53 -177 2193 89 0 38 chr2 23876267 23876409 -226811445 + AluSx SINE Alu 1 147 -165 2139 106 3 7 chr2 23876409 23876712 -226811142 + AluSg SINE Alu 1 302 -8 2193 89 0 38 chr2 23876712 23876885 -226810969 + AluSx SINE Alu 147 304 -8 1210 65 126 75 chr2 23876885 23877047 -226810807 + MER30 DNA MER1_type 53 230 0 242 291 36 45 chr2 23877048 23877158 -226810696 - L1MC4a LINE L1 -372 5798 5690 476 266 25 14 chr2 23877726 23877891 -226809963 + MIR SINE MIR 33 198 -64 354 283 114 33 chr2 23877892 23878076 -226809778 + L2 LINE L2 2278 2476 -838 876 262 97 83 chr2 23878077 23878183 -226809671 + L2 LINE L2 2597 2700 -572 1677 139 12 0 chr2 23878183 23878442 -226809412 + AluSx SINE Alu 7 268 -44 180 0 0 0 chr2 23878450 23878470 -226809384 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 876 262 97 83 chr2 23878470 23878540 -226809314 + L2 LINE L2 2706 2774 -498 261 0 0 0 chr2 23878540 23878569 -226809285 + (TG)n Simple_repeat Simple_repeat 2 30 0 207 0 0 0 chr2 23878569 23878592 -226809262 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 876 262 97 83 chr2 23878592 23879056 -226808798 + L2 LINE L2 2773 3272 0 828 270 83 12 chr2 23880036 23880277 -226807577 - MER45C DNA AcHobo -680 273 16 1720 149 0 24 chr2 23880431 23880720 -226807134 - AluJb SINE Alu -30 282 1 2130 115 0 6 chr2 23880737 23881051 -226806803 - AluSx SINE Alu 0 312 1 288 252 143 25 chr2 23881114 23881233 -226806621 + L2 LINE L2 3137 3269 -3 427 299 113 31 chr2 23884224 23884676 -226803178 + L2 LINE L2 1988 2476 -838 302 351 18 0 chr2 23884761 23884875 -226802979 + L2 LINE L2 3136 3251 -21 1625 51 69 5 chr2 23885645 23885862 -226801992 - AluY SINE Alu -80 231 1 556 170 11 0 chr2 23885862 23885956 -226801898 - FLAM_A SINE Alu -47 95 1 2247 233 91 69 chr2 23886132 23886926 -226800928 + MER21B LTR ERV1 1 811 -52 710 269 41 62 chr2 23886953 23887007 -226800847 + L1M4 LINE L1 3459 3513 -2633 2349 62 0 0 chr2 23887007 23887328 -226800526 + AluY SINE Alu 1 321 0 710 269 41 62 chr2 23887328 23887514 -226800340 + L1M4 LINE L1 3513 3701 -2445 1711 160 3 10 chr2 23887514 23887814 -226800040 + AluJo SINE Alu 1 298 -14 710 269 41 62 chr2 23887814 23887963 -226799891 + L1M4 LINE L1 3701 3843 -2303 2053 105 10 0 chr2 23887963 23888259 -226799595 + AluSg SINE Alu 1 299 -11 710 269 41 62 chr2 23888259 23888282 -226799572 + L1M4 LINE L1 3843 3865 -2281 2036 112 3 0 chr2 23888344 23888653 -226799201 + AluSx SINE Alu 1 310 0 666 110 0 0 chr2 23888806 23888897 -226798957 + AluSg/x SINE Alu 70 160 -150 2330 75 0 7 chr2 23891398 23891704 -226796150 + AluSc SINE Alu 1 304 -5 325 269 104 30 chr2 23891809 23891943 -226795911 + L2 LINE L2 3160 3303 -10 1426 180 0 53 chr2 23891943 23892088 -226795766 + AluJo SINE Alu 1 124 -188 1661 118 59 7 chr2 23892088 23892383 -226795471 + AluSx SINE Alu 1 309 0 1426 180 0 53 chr2 23892383 23892536 -226795318 + AluJo SINE Alu 124 284 -28 1615 189 3 0 chr2 23893313 23893610 -226794244 + AluSx SINE Alu 1 298 -14 570 168 0 10 chr2 23893656 23893757 -226794097 + FLAM_C SINE Alu 33 132 -11 1908 81 4 0 chr2 23893992 23894239 -226793615 + AluSx SINE Alu 1 248 -64 1787 156 0 7 chr2 23894420 23894721 -226793133 - AluJb SINE Alu -13 299 1 24 32 0 0 chr2 23894744 23894775 -226793079 + AT_rich Low_complexity Low_complexity 1 31 0 36 40 0 0 chr2 23894823 23894873 -226792981 + AT_rich Low_complexity Low_complexity 1 50 0 357 218 115 109 chr2 23894884 23895049 -226792805 + L1ME4a LINE L1 5956 6121 0 550 257 128 16 chr2 23895049 23895298 -226792556 + L1MC4a LINE L1 5796 6072 -1736 29 0 0 0 chr2 23895441 23895470 -226792384 + AT_rich Low_complexity Low_complexity 1 29 0 815 136 0 23 chr2 23895479 23895611 -226792243 + FLAM_C SINE Alu 1 129 -14 24 0 0 0 chr2 23895611 23895635 -226792219 + AT_rich Low_complexity Low_complexity 1 24 0 1976 108 14 0 chr2 23895635 23895955 -226791899 + AluSc SINE Alu 1 324 0 1142 184 0 5 chr2 23896070 23896271 -226791583 + AluJo SINE Alu 1 200 -112 533 295 46 50 chr2 23896278 23896559 -226791295 + L1ME LINE L1 5496 5775 -346 1990 120 17 0 chr2 23896877 23897168 -226790686 - AluSx SINE Alu -15 297 2 832 258 79 47 chr2 23899385 23899641 -226788213 + L1MC4 LINE L1 7492 7738 -304 2198 101 0 10 chr2 23899641 23899947 -226787907 - AluSq SINE Alu -10 303 1 832 258 79 47 chr2 23899947 23900224 -226787630 + L1MC4 LINE L1 7738 8042 0 2017 142 3 0 chr2 23900581 23900892 -226786962 + AluSp SINE Alu 1 312 -1 2183 110 0 3 chr2 23900903 23901202 -226786652 + AluSx SINE Alu 1 298 -14 2155 73 0 17 chr2 23901441 23901729 -226786125 + AluSq SINE Alu 24 306 -7 2164 94 0 13 chr2 23901969 23902103 -226785751 + AluSp SINE Alu 3 137 -176 2475 53 3 0 chr2 23902103 23902407 -226785447 + AluY SINE Alu 1 305 -6 2164 94 0 13 chr2 23902407 23902570 -226785284 + AluSp SINE Alu 137 296 -17 2306 77 3 3 chr2 23902598 23902898 -226784956 + AluSp SINE Alu 1 300 -13 1893 139 0 7 chr2 23902901 23903203 -226784651 + AluSx SINE Alu 3 302 -10 755 142 0 71 chr2 23903211 23903352 -226784502 + FLAM_C SINE Alu 1 131 -2 247 301 84 0 chr2 23903839 23903982 -226783872 - L1ME LINE L1 -207 5914 5760 183 162 0 0 chr2 23905160 23905197 -226782657 + T-rich Low_complexity Low_complexity 1 37 0 2134 77 3 7 chr2 23905211 23905497 -226782357 + AluSx SINE Alu 18 302 -10 795 124 0 0 chr2 23905507 23905612 -226782242 - FLAM_C SINE Alu -26 117 13 1286 102 0 66 chr2 23906171 23906397 -226781457 + AluJo SINE Alu 94 304 -8 209 178 0 82 chr2 23906638 23906711 -226781143 + (CCCCG)n Simple_repeat Simple_repeat 5 71 0 2293 85 0 0 chr2 23908068 23908361 -226779493 + AluSg SINE Alu 9 301 -9 270 195 273 0 chr2 23908556 23908633 -226779221 - L2 LINE L2 -3 3310 3213 417 323 37 12 chr2 23908649 23908813 -226779041 + L2 LINE L2 2924 3091 -181 1289 252 213 32 chr2 23908847 23909691 -226778163 + L2 LINE L2 2174 3213 -100 1431 183 13 40 chr2 23909691 23909992 -226777862 + AluJb SINE Alu 1 293 -19 1289 252 213 32 chr2 23909992 23910100 -226777754 + L2 LINE L2 3213 3300 -13 198 0 0 0 chr2 23910101 23910123 -226777731 + (TTTTG)n Simple_repeat Simple_repeat 5 26 0 1639 162 0 55 chr2 23910126 23910435 -226777419 - AluJo SINE Alu -20 292 1 261 271 14 0 chr2 23910557 23910627 -226777227 + L2 LINE L2 3200 3270 -2 188 241 121 60 chr2 23910716 23910799 -226777055 - MIR SINE MIR -78 130 43 2630 225 69 60 chr2 23912002 23912201 -226775653 - L1ME3A LINE L1 -14 6156 5960 1722 137 22 26 chr2 23912201 23912514 -226775340 - AluJb SINE Alu 0 312 1 2630 225 69 60 chr2 23912514 23912988 -226774866 - L1ME3A LINE L1 -210 5960 5492 2159 107 16 0 chr2 23912988 23913296 -226774558 - AluSq SINE Alu 0 313 1 2630 225 69 60 chr2 23913296 23913349 -226774505 - L1ME3A LINE L1 -678 5492 5441 1612 96 5 0 chr2 23913349 23913568 -226774286 - AluSg/x SINE Alu -10 302 83 2630 225 69 60 chr2 23913568 23913695 -226774159 - L1ME3A LINE L1 -729 5441 5317 2096 126 0 0 chr2 23913695 23913997 -226773857 - AluSq SINE Alu -11 302 1 2630 225 69 60 chr2 23913997 23914178 -226773676 - L1ME3A LINE L1 -853 5317 5114 995 253 30 50 chr2 23914146 23914185 -226773669 - L1M4 LINE L1 -933 5213 5175 * 1637 152 0 70 chr2 23914185 23914369 -226773485 - AluJo SINE Alu -6 306 153 2182 100 3 0 chr2 23914369 23914679 -226773175 - AluSp SINE Alu -2 311 1 1637 152 0 70 chr2 23914679 23914823 -226773031 - AluJo SINE Alu -159 153 1 995 253 30 50 chr2 23914823 23914921 -226772933 - L1M4 LINE L1 -971 5175 5077 2236 92 0 13 chr2 23914921 23915226 -226772628 + AluSx SINE Alu 1 301 -11 995 253 30 50 chr2 23915226 23915487 -226772367 - L1M4 LINE L1 -1069 5077 4822 311 311 0 0 chr2 23915610 23915700 -226772154 + (TG)n Simple_repeat Simple_repeat 2 91 0 399 293 26 0 chr2 23916025 23916141 -226771713 - MIR3 SINE MIR -50 158 40 2178 101 3 7 chr2 23916618 23916925 -226770929 + AluSx SINE Alu 1 306 -6 744 288 161 32 chr2 23916974 23917275 -226770579 - L2 LINE L2 -453 2861 2600 1944 146 0 3 chr2 23917275 23917598 -226770256 + AluSx SINE Alu 1 312 0 744 288 161 32 chr2 23917598 23917769 -226770085 - L2 LINE L2 -714 2600 2328 1795 140 44 0 chr2 23918189 23918482 -226769372 + AluSx SINE Alu 1 306 -6 519 184 72 121 chr2 23918569 23918776 -226769078 - L1MC4a LINE L1 -6 7802 7606 1954 89 41 7 chr2 23918874 23919165 -226768689 - AluY SINE Alu -10 301 1 2185 101 0 19 chr2 23919167 23919483 -226768371 - AluSx SINE Alu 0 312 3 839 141 0 15 chr2 23919485 23919620 -226768234 - AluSq/x SINE Alu -179 133 1 192 250 93 83 chr2 23920802 23920852 -226767002 - MIR SINE MIR -1 261 213 1464 120 127 15 chr2 23920852 23921133 -226766721 - AluSg1 SINE Alu 0 309 1 192 250 93 83 chr2 23921133 23921190 -226766664 - MIR SINE MIR -49 213 153 2376 91 0 0 chr2 23921690 23921997 -226765857 - AluY SINE Alu -4 307 1 32 26 0 0 chr2 23922061 23922100 -226765754 + AT_rich Low_complexity Low_complexity 1 39 0 680 169 25 25 chr2 23922100 23922218 -226765636 - FLAM_C SINE Alu -15 118 1 191 333 69 14 chr2 23923182 23923254 -226764600 + L2 LINE L2 3194 3269 -3 248 235 118 35 chr2 23924324 23924409 -226763445 + MIR SINE MIR 114 205 -57 2305 45 7 3 chr2 23924982 23925269 -226762585 - AluY SINE Alu -23 288 1 2023 154 0 0 chr2 23925841 23926153 -226761701 - AluSx SINE Alu 0 312 1 970 102 0 0 chr2 23927290 23927418 -226760436 - AluSx SINE Alu -152 160 33 216 261 123 0 chr2 23927608 23927633 -226760221 - L2 LINE L2 -22 3250 3229 678 172 0 17 chr2 23927633 23927749 -226760105 - MER81 DNA DNA 0 114 1 216 261 123 0 chr2 23927749 23927788 -226760066 - L2 LINE L2 -43 3229 3178 799 276 55 57 chr2 23927863 23928001 -226759853 - L2 LINE L2 -22 3291 3154 2219 101 0 0 chr2 23928001 23928297 -226759557 - AluSg SINE Alu -14 296 1 799 276 55 57 chr2 23928297 23928329 -226759525 - L2 LINE L2 -159 3154 3123 2203 99 0 0 chr2 23928329 23928623 -226759231 + AluSq SINE Alu 1 294 -19 799 276 55 57 chr2 23928623 23928817 -226759037 - L2 LINE L2 -190 3123 2927 1842 139 7 16 chr2 23928982 23929292 -226758562 - AluSx SINE Alu -5 307 1 197 378 118 15 chr2 23929311 23929446 -226758408 - L2 LINE L2 -2 3270 3122 249 247 142 13 chr2 23929610 23929722 -226758132 - MIR SINE MIR -66 142 17 209 342 105 26 chr2 23929735 23929849 -226758005 - MIR3 SINE MIR -52 156 34 321 157 0 0 chr2 23929849 23929900 -226757954 - AluSg SINE Alu -187 113 63 28 0 0 0 chr2 23930253 23930281 -226757573 + AT_rich Low_complexity Low_complexity 1 28 0 908 144 7 13 chr2 23931383 23931536 -226756318 + AluJo SINE Alu 1 152 -160 213 267 50 0 chr2 23931595 23931655 -226756199 + L2 LINE L2 1352 1414 -1900 568 298 126 26 chr2 23931670 23931853 -226756001 + L2 LINE L2 1525 1688 -1626 2179 106 0 0 chr2 23931853 23932145 -226755709 + AluSx SINE Alu 1 292 -20 568 298 126 26 chr2 23932145 23932350 -226755504 + L2 LINE L2 1688 1952 -1362 901 182 0 28 chr2 23932353 23932534 -226755320 - FRAM SINE Alu 0 40 1 505 142 132 28 chr2 23932630 23932736 -226755118 + L2 LINE L2 3189 3305 -8 185 158 0 0 chr2 23932760 23932798 -226755056 + L2 LINE L2 3273 3310 -3 200 286 7 65 chr2 23933818 23933972 -226753882 + (CGGGG)n Simple_repeat Simple_repeat 5 149 0 569 255 52 99 chr2 23934925 23935290 -226752564 + MER34 LTR ERV1 1 348 -194 860 161 301 0 chr2 23935317 23935510 -226752344 + AluJo SINE Alu 58 308 -4 262 246 18 0 chr2 23935514 23935571 -226752283 + MER34 LTR ERV1 446 503 -39 1107 141 18 6 chr2 23935885 23936055 -226751799 - FAM SINE Alu -3 172 1 2171 106 7 0 chr2 23937081 23937383 -226750471 + AluSx SINE Alu 1 304 -8 2266 82 0 23 chr2 23938697 23939001 -226748853 - AluY SINE Alu -14 297 1 1730 151 42 3 chr2 23939006 23939290 -226748564 - AluJb SINE Alu -17 295 1 356 271 19 6 chr2 23940343 23940447 -226747407 - MIR3 SINE MIR -3 205 100 191 331 135 7 chr2 23940538 23940686 -226747168 - MER5A DNA MER1_type 0 189 23 489 267 35 19 chr2 23940755 23940901 -226746953 + MIR SINE MIR 15 155 -53 594 75 0 0 chr2 23941347 23941427 -226746427 + (CAGGG)n Simple_repeat Simple_repeat 1 80 0 808 185 0 0 chr2 23942364 23942494 -226745360 - MER20 DNA MER1_type -1 218 89 2330 120 42 3 chr2 23942508 23942865 -226744989 + MER31A LTR ERV1 115 485 0 2740 23 0 0 chr2 23942960 23943259 -226744595 + AluY SINE Alu 1 299 -12 281 185 15 0 chr2 23943480 23943545 -226744309 + CT-rich Low_complexity Low_complexity 3 68 0 911 137 0 0 chr2 23943547 23943671 -226744183 - FLAM_C SINE Alu -18 125 2 266 274 36 24 chr2 23944167 23944251 -226743603 + MER21B LTR ERV1 12 96 -767 706 194 8 22 chr2 23944252 23944386 -226743468 - FLAM_C SINE Alu -1 132 1 1590 203 182 104 chr2 23944412 23944614 -226743240 + MER21B LTR ERV1 39 224 -639 2015 141 0 10 chr2 23944614 23944784 -226743070 - AluSx SINE Alu -9 303 136 1340 113 204 57 chr2 23944784 23945049 -226742805 - AluSx SINE Alu -8 304 1 2015 141 0 10 chr2 23945049 23945184 -226742670 - AluSx SINE Alu -176 136 1 1590 203 182 104 chr2 23945184 23945368 -226742486 + MER21B LTR ERV1 224 392 -471 2143 121 0 0 chr2 23945368 23945657 -226742197 - AluSx SINE Alu -23 289 1 1590 203 182 104 chr2 23945657 23945993 -226741861 + MER21B LTR ERV1 392 819 -44 1256 134 0 0 chr2 23946073 23946244 -226741610 + AluSq SINE Alu 1 171 -142 235 236 0 0 chr2 23946723 23946778 -226741076 + MLT1I LTR MaLR 329 383 -26 1264 92 52 0 chr2 23946824 23946998 -226740856 + AluSp SINE Alu 125 307 -6 2424 63 17 0 chr2 23946999 23947299 -226740555 + AluY SINE Alu 2 306 -5 1826 108 79 11 chr2 23947311 23947590 -226740264 + AluSx SINE Alu 6 303 -9 318 273 13 13 chr2 23947636 23947790 -226740064 + L1ME LINE L1 3830 3983 -2163 1019 161 18 78 chr2 23947806 23948023 -226739831 - AluJb SINE Alu -23 289 86 232 293 30 36 chr2 23948024 23948169 -226739685 + L1ME LINE L1 4103 4248 -1898 2396 51 41 0 chr2 23948169 23948464 -226739390 + AluY SINE Alu 2 308 -3 232 293 30 36 chr2 23948464 23948485 -226739369 + L1ME LINE L1 4248 4268 -1878 451 293 41 53 chr2 23948544 23948956 -226738898 + L1ME LINE L1 4288 4704 -1442 1836 157 51 7 chr2 23948956 23949250 -226738604 + AluJb SINE Alu 1 307 -5 451 293 41 53 chr2 23949250 23949299 -226738555 + L1ME LINE L1 4704 4745 -1401 2154 126 7 3 chr2 23949299 23949608 -226738246 + AluSx SINE Alu 1 310 -2 451 293 41 53 chr2 23949608 23949636 -226738218 + L1ME LINE L1 4745 4772 -1374 358 287 37 38 chr2 23949642 23949810 -226738044 + L1ME LINE L1 5634 5799 -341 387 0 0 0 chr2 23949931 23949974 -226737880 + (CA)n Simple_repeat Simple_repeat 1 43 0 4627 67 0 7 chr2 23950143 23950627 -226737227 - L1PA8 LINE L1 -3 6169 5688 2127 108 3 14 chr2 23950627 23950923 -226736931 - AluSg SINE Alu -17 293 1 4627 67 0 7 chr2 23950923 23951033 -226736821 - L1PA8 LINE L1 -484 5688 5579 1731 149 3 97 chr2 23951036 23951378 -226736476 - AluJo SINE Alu -2 310 1 434 180 62 123 chr2 23951379 23951509 -226736345 - Charlie2a DNA MER1_type -63 2799 2663 1585 207 7 0 chr2 23951509 23951789 -226736065 - AluJo SINE Alu -30 282 1 434 180 62 123 chr2 23951789 23951817 -226736037 - Charlie2a DNA MER1_type -199 2663 2635 1815 131 0 11 chr2 23951817 23952077 -226735777 + AluSx SINE Alu 1 257 -55 434 180 62 123 chr2 23952077 23952161 -226735693 - Charlie2a DNA MER1_type -227 2635 2571 38788 81 11 8 chr2 23952164 23958265 -226729589 + L1PA6 LINE L1 27 6137 -17 3923 179 93 35 chr2 23958265 23958679 -226729175 - Charlie2a DNA MER1_type -272 2590 2202 2214 123 0 0 chr2 23958679 23958988 -226728866 - AluY SINE Alu -2 309 1 3923 179 93 35 chr2 23958988 23959462 -226728392 - Charlie2a DNA MER1_type -660 2202 1628 2216 136 0 0 chr2 23959462 23959771 -226728083 + AluSx SINE Alu 1 309 -3 3923 179 93 35 chr2 23959771 23959940 -226727914 - Charlie2a DNA MER1_type -1234 1628 1470 471 274 34 0 chr2 23960010 23960127 -226727727 - Charlie2b DNA MER1_type -2131 651 531 582 266 79 39 chr2 23960142 23960447 -226727407 - Charlie2b DNA MER1_type -2465 317 1 491 326 23 31 chr2 23960961 23961314 -226726540 + L1PA15 LINE L1 1 350 -7231 11149 180 168 18 chr2 23962363 23963320 -226724534 + L1PA15 LINE L1 2319 3132 -4471 2296 114 7 0 chr2 23963320 23963626 -226724228 - AluSq SINE Alu -5 308 1 11149 180 168 18 chr2 23963626 23965301 -226722553 + L1PA15 LINE L1 3132 4556 -3047 207 0 0 0 chr2 23965301 23965324 -226722530 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 11149 180 168 18 chr2 23965324 23965626 -226722228 + L1PA15 LINE L1 4556 4812 -2791 2481 86 0 0 chr2 23965626 23965929 -226721925 + AluY SINE Alu 1 303 -8 11149 180 168 18 chr2 23965929 23967335 -226720519 + L1PA15 LINE L1 4812 7477 -126 1781 223 84 62 chr2 23967364 23967948 -226719906 + MER21B LTR ERV1 131 727 -136 1955 161 7 0 chr2 23968074 23968365 -226719489 - AluJo SINE Alu -19 293 1 503 246 204 9 chr2 23968946 23969275 -226718579 + L1ME4a LINE L1 5593 5985 -136 2232 112 0 3 chr2 23969303 23969608 -226718246 - AluSq SINE Alu -9 304 1 306 314 131 62 chr2 23969827 23970164 -226717690 + L2 LINE L2 2868 3227 -45 184 216 0 0 chr2 23970169 23970206 -226717648 - L2 LINE L2 -50 3263 3227 1852 182 10 0 chr2 23970297 23970599 -226717255 + AluJo SINE Alu 1 305 -7 2185 125 0 0 chr2 23970601 23970906 -226716948 + AluSq SINE Alu 1 305 -8 183 42 0 0 chr2 23970970 23970994 -226716860 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2763 258 62 36 chr2 23971233 23972044 -226715810 - HERVL40 LTR ERVL -848 4682 3851 1314 238 31 10 chr2 23972049 23972339 -226715515 - LTR40c LTR ERVL -169 296 1 615 220 33 33 chr2 23972687 23972837 -226715017 - L2 LINE L2 0 3272 3123 2132 132 0 0 chr2 23973053 23973349 -226714505 + AluY SINE Alu 1 296 -15 745 176 0 0 chr2 23973377 23973496 -226714358 - FLAM_A SINE Alu -13 120 2 2099 114 3 69 chr2 23973579 23973913 -226713941 + AluSx SINE Alu 1 312 0 2101 125 3 3 chr2 23974021 23974316 -226713538 - AluSx SINE Alu -11 301 7 2197 139 0 0 chr2 23974439 23974749 -226713105 - AluSx SINE Alu -2 310 1 247 190 17 0 chr2 23974754 23974812 -226713042 + L1ME4a LINE L1 6062 6120 -1 318 305 51 8 chr2 23975443 23975561 -226712293 - L2 LINE L2 0 3272 3150 190 285 0 106 chr2 23975632 23975755 -226712099 - L2 LINE L2 -243 3029 2920 * 199 315 67 34 chr2 23975745 23975834 -226712020 + L2 LINE L2 3168 3259 -13 213 39 0 0 chr2 23975834 23975860 -226711994 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 331 253 25 13 chr2 23976470 23976549 -226711305 + MLT1K LTR MaLR 509 588 0 2270 92 3 0 chr2 23976993 23977318 -226710536 + AluSq SINE Alu 1 326 0 324 264 73 27 chr2 23977340 23977450 -226710404 + MIR SINE MIR 30 144 -118 2015 84 80 28 chr2 23977557 23977843 -226710011 - AluSq SINE Alu -12 301 1 1732 150 43 37 chr2 23978330 23978612 -226709242 + MER58B DNA MER1_type 1 287 -2133 2035 110 147 21 chr2 23978612 23978993 -226708861 + MSTB1 LTR MaLR 1 429 -3 1732 150 43 37 chr2 23978993 23979037 -226708817 + MER58B DNA MER1_type 287 329 -12 2193 110 21 0 chr2 23979056 23979347 -226708507 + AluSq SINE Alu 1 297 -16 22 103 0 0 chr2 23980688 23980766 -226707088 + GC_rich Low_complexity Low_complexity 1 78 0 557 183 174 9 chr2 23981543 23981773 -226706081 - L1MEc LINE L1 -2956 3259 2992 1001 198 33 33 chr2 23981796 23982008 -226705846 - AluJo SINE Alu -100 212 1 3227 186 28 93 chr2 23982051 23982106 -226705748 - L1ME1 LINE L1 -5 6161 6104 1693 162 3 24 chr2 23982106 23982396 -226705458 + AluJo SINE Alu 6 289 -23 3227 186 28 93 chr2 23982396 23982569 -226705285 - L1ME1 LINE L1 -62 6104 5921 2054 123 37 7 chr2 23982569 23982869 -226704985 - AluSx SINE Alu -3 309 1 3227 186 28 93 chr2 23982869 23983573 -226704281 - L1ME1 LINE L1 -245 5921 5289 335 77 0 167 chr2 23983582 23983619 -226704235 - L1MB7 LINE L1 -18 6166 6147 2311 64 3 54 chr2 23983619 23983932 -226703922 - AluY SINE Alu -14 297 1 335 77 0 167 chr2 23983932 23983972 -226703882 - L1MB7 LINE L1 -37 6147 6102 3390 157 23 10 chr2 23983999 23984597 -226703257 - L1MB7 LINE L1 -69 6115 5510 2676 238 98 101 chr2 23984596 23984672 -226703182 - L1MEc LINE L1 -5019 1377 1302 * 2052 145 3 0 chr2 23984672 23984969 -226702885 - AluSx SINE Alu -14 298 1 2676 238 98 101 chr2 23984969 23985239 -226702615 - L1MEc LINE L1 -5094 1302 1033 821 150 0 15 chr2 23985239 23985395 -226702459 - FLAM_C SINE Alu 0 133 1 2676 238 98 101 chr2 23985395 23986392 -226701462 - L1MEc LINE L1 -5363 1033 37 * 2759 233 56 58 chr2 23986386 23986809 -226701045 - L1ME LINE L1 -4984 1086 664 13097 110 10 28 chr2 23986809 23989626 -226698228 - L1PA8 LINE L1 0 6172 3382 2759 233 56 58 chr2 23989626 23990277 -226697577 - L1ME LINE L1 -5406 664 81 800 211 11 58 chr2 23990751 23990941 -226696913 + AluJo SINE Alu 125 305 -7 2013 141 3 10 chr2 23991675 23991979 -226695875 + AluSx SINE Alu 1 302 -10 1926 149 0 32 chr2 23993057 23993242 -226694612 - AluJb SINE Alu -1 311 139 2071 123 10 14 chr2 23993242 23993534 -226694320 - AluSx SINE Alu -21 291 1 1926 149 0 32 chr2 23993534 23993664 -226694190 - AluJb SINE Alu -173 139 6 3027 140 35 40 chr2 23993772 23994365 -226693489 - L1MB4 LINE L1 -15 6165 5576 758 241 0 0 chr2 23994497 23994659 -226693195 - FRAM SINE Alu 0 166 5 1990 131 7 7 chr2 23995356 23995639 -226692215 - AluSg SINE Alu -27 283 1 2026 112 36 0 chr2 23995829 23996105 -226691749 + AluSx SINE Alu 12 297 -15 240 242 65 59 chr2 23996848 23997034 -226690820 - L1ME4a LINE L1 -12 6109 5923 203 219 172 0 chr2 23997242 23997306 -226690548 - MIR SINE MIR -124 138 64 2251 116 0 0 chr2 23997318 23997621 -226690233 - AluSx SINE Alu -9 303 1 954 141 52 5 chr2 23997621 23997812 -226690042 - L1MA8 LINE L1 -36 6255 6056 2282 101 0 20 chr2 23997824 23998130 -226689724 + AluSx SINE Alu 1 300 -12 2363 61 10 14 chr2 23998228 23998386 -226689468 - AluSg SINE Alu -18 292 134 2426 80 0 3 chr2 23998386 23998688 -226689166 - AluY SINE Alu -10 301 1 2363 61 10 14 chr2 23998688 23998822 -226689032 - AluSg SINE Alu -176 134 1 5377 146 66 32 chr2 23999585 24000311 -226687543 + Charlie1 DNA MER1_type 1599 2374 -387 2368 75 26 7 chr2 24000311 24000494 -226687360 - AluY SINE Alu 0 311 118 207 0 0 0 chr2 24000494 24000517 -226687337 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2368 75 26 7 chr2 24000517 24000638 -226687216 - AluY SINE Alu -193 118 1 5377 146 66 32 chr2 24000638 24000976 -226686878 + Charlie1 DNA MER1_type 2374 2699 -62 951 122 95 0 chr2 24001010 24001158 -226686696 + AluSc SINE Alu 134 295 -14 1545 141 65 4 chr2 24001306 24001568 -226686286 + AluJo SINE Alu 3 280 -32 1165 131 16 6 chr2 24001571 24001754 -226686100 + L1M2 LINE L1 6 190 -6659 4252 188 198 0 chr2 24001788 24002770 -226685084 + L1M2 LINE L1 565 1740 -5109 2205 78 58 3 chr2 24002839 24003133 -226684721 - AluY SINE Alu -1 310 1 22 0 0 0 chr2 24003730 24003752 -226684102 + AT_rich Low_complexity Low_complexity 1 22 0 235 88 0 0 chr2 24004331 24004365 -226683489 - Alu SINE Alu -5 295 262 3030 225 51 46 chr2 24004375 24005687 -226682167 - L1MCc LINE L1 -4873 2068 734 5966 108 9 8 chr2 24005727 24006593 -226681261 - L1MA2 LINE L1 -1 6303 5434 2025 123 74 0 chr2 24006593 24006877 -226680977 - AluSx SINE Alu -7 305 1 5966 108 9 8 chr2 24006877 24006893 -226680961 - L1MA2 LINE L1 -870 5434 5420 329 167 17 17 chr2 24006893 24006953 -226680901 + LTR45 LTR ERV1 441 500 -25 18199 124 58 91 chr2 24006979 24007559 -226680295 - L1M1 LINE L1 -4140 3425 2827 2082 148 7 0 chr2 24007559 24007869 -226679985 - AluSx SINE Alu 0 312 1 18199 124 58 91 chr2 24007869 24008419 -226679435 - L1M1 LINE L1 -4738 2827 2260 2260 107 0 16 chr2 24008419 24008736 -226679118 - AluSx SINE Alu 0 312 1 577 62 0 82 chr2 24008737 24008834 -226679020 - MER30 DNA MER1_type -90 140 52 1147 130 0 6 chr2 24008834 24009003 -226678851 - AluSg/x SINE Alu -19 293 126 2365 107 0 0 chr2 24009003 24009311 -226678543 - AluSx SINE Alu -2 310 3 18199 124 58 91 chr2 24009311 24011439 -226676415 - L1M1 LINE L1 -5302 2263 16 1208 208 0 25 chr2 24011473 24011757 -226676097 - L1M4 LINE L1 -757 5389 5113 944 141 65 109 chr2 24011789 24012037 -226675817 - L1MCc LINE L1 -6174 249 13 252 0 0 0 chr2 24012649 24012677 -226675177 + (TA)n Simple_repeat Simple_repeat 2 29 0 2433 81 3 0 chr2 24012677 24012984 -226674870 - AluSq SINE Alu -5 308 1 2199 111 0 3 chr2 24013495 24013793 -226674061 + AluSq SINE Alu 1 297 -16 1851 228 45 14 chr2 24013930 24014435 -226673419 - L1MEd LINE L1 -2942 3187 2667 192 254 0 17 chr2 24014447 24014506 -226673348 - MIR SINE MIR -55 207 150 646 226 28 50 chr2 24014540 24014600 -226673254 + MER5B DNA MER1_type 1 61 -117 2320 105 0 0 chr2 24014600 24014896 -226672958 + AluSx SINE Alu 1 296 -16 646 226 28 50 chr2 24014896 24015016 -226672838 + MER5B DNA MER1_type 61 177 -1 1780 218 62 24 chr2 24015963 24016413 -226671441 - MLT1C LTR MaLR 0 467 1 27 0 0 0 chr2 24016664 24016691 -226671163 + AT_rich Low_complexity Low_complexity 1 27 0 398 277 104 51 chr2 24016912 24017119 -226670735 - L1MEd LINE L1 -899 1591 1396 1954 168 0 9 chr2 24017119 24017434 -226670420 - AluJb SINE Alu 0 312 1 398 277 104 51 chr2 24017434 24017730 -226670124 - L1MEd LINE L1 -1094 1396 976 1805 160 13 19 chr2 24018309 24018622 -226669232 + AluJb SINE Alu 2 312 0 2380 106 0 0 chr2 24018961 24019264 -226668590 + AluSx SINE Alu 1 303 -9 3532 171 24 5 chr2 24019599 24020235 -226667619 + L1MB8 LINE L1 5525 6172 -6 21 0 0 0 chr2 24021263 24021284 -226666570 + AT_rich Low_complexity Low_complexity 1 21 0 2229 108 3 3 chr2 24022903 24023199 -226664655 + AluSp SINE Alu 1 296 -17 255 161 0 0 chr2 24023199 24023255 -226664599 + (TA)n Simple_repeat Simple_repeat 1 56 0 804 318 42 19 chr2 24023662 24024137 -226663717 - L2 LINE L2 -15 3298 2813 1811 271 137 10 chr2 24025243 24026141 -226661713 - L2 LINE L2 -978 2336 1325 336 111 0 19 chr2 24026925 24026979 -226660875 + Alu SINE Alu 1 53 -248 473 34 0 0 chr2 24026979 24027038 -226660816 - AluJ/FLAM SINE Alu -212 100 42 1765 125 0 0 chr2 24027052 24027284 -226660570 + AluSx SINE Alu 64 295 -17 2240 118 3 10 chr2 24027835 24028149 -226659705 - AluJb SINE Alu 0 312 1 463 275 0 47 chr2 24028183 24028354 -226659500 - L1MC5 LINE L1 -52 7909 7747 2043 122 0 13 chr2 24028867 24029170 -226658684 + AluSx SINE Alu 1 299 -13 1755 174 17 0 chr2 24029685 24029978 -226657876 - AluJb SINE Alu -14 298 1 321 261 165 9 chr2 24030219 24030334 -226657520 - L2 LINE L2 -2 3270 3138 1421 209 86 36 chr2 24030908 24031548 -226656306 + L1MDa LINE L1 857 1588 -4952 350 123 18 0 chr2 24031593 24031650 -226656204 + L1MD1 LINE L1 6063 6120 -122 262 217 54 54 chr2 24031643 24031772 -226656082 - L1MC5 LINE L1 -287 7674 7546 * 872 180 7 0 chr2 24033507 24033657 -226654197 - FRAM SINE Alu -25 151 1 2048 146 7 0 chr2 24034301 24034602 -226653252 + AluSx SINE Alu 1 303 -9 1698 134 4 43 chr2 24035461 24035737 -226652117 + AluJo SINE Alu 36 300 -12 536 255 149 70 chr2 24036662 24037026 -226650828 - MLT1L LTR MaLR -50 564 110 1658 169 18 0 chr2 24037316 24037588 -226650266 + AluJb SINE Alu 1 277 -35 548 345 158 10 chr2 24037717 24038299 -226649555 + L3 LINE CR1 816 1483 -94 2136 125 0 13 chr2 24038526 24038829 -226649025 - AluSp SINE Alu -14 299 1 1035 149 14 59 chr2 24040140 24040361 -226647493 - L1PA16 LINE L1 -1 6165 5955 244 250 26 0 chr2 24041134 24041210 -226646644 - L1ME3 LINE L1 -206 5956 5879 2331 101 7 0 chr2 24041241 24041538 -226646316 + AluSx SINE Alu 1 299 -13 588 216 41 26 chr2 24041583 24041777 -226646077 - L1ME3 LINE L1 -265 5905 5709 380 113 0 0 chr2 24041813 24041888 -226645966 - AluS SINE Alu 0 305 231 2367 91 0 7 chr2 24041970 24042266 -226645588 - AluSc SINE Alu -15 294 1 367 292 44 13 chr2 24042269 24042495 -226645359 - L1ME3 LINE L1 -1112 5034 4802 319 47 0 0 chr2 24042605 24042648 -226645206 - MADE1 DNA Mariner -37 43 1 809 122 3 16 chr2 24042651 24042794 -226645060 - L1M4 LINE L1 -1537 5003 4860 609 188 194 7 chr2 24042817 24042961 -226644893 + MER20 DNA MER1_type 45 215 -4 907 263 103 23 chr2 24042965 24043010 -226644844 - L1M4 LINE L1 -1695 4845 4805 23 0 0 0 chr2 24043010 24043033 -226644821 + AT_rich Low_complexity Low_complexity 1 23 0 907 263 103 23 chr2 24043033 24043171 -226644683 - L1M4 LINE L1 -1735 4805 4680 1958 92 96 0 chr2 24043171 24043443 -226644411 - AluSx SINE Alu -14 298 1 907 263 103 23 chr2 24043443 24043774 -226644080 - L1M4 LINE L1 -1860 4680 4256 1836 137 11 11 chr2 24043774 24044082 -226643772 - AluSx SINE Alu 0 308 1 907 263 103 23 chr2 24044082 24044112 -226643742 - L1M4 LINE L1 -2284 4256 4230 234 290 84 47 chr2 24044113 24044327 -226643527 - L1MC5 LINE L1 -34 7927 7706 706 247 148 22 chr2 24044380 24044415 -226643439 - L1MEc LINE L1 -4616 1924 1895 2157 153 65 28 chr2 24044415 24044845 -226643009 - L1MC1 LINE L1 0 6333 5888 706 247 148 22 chr2 24044845 24045393 -226642461 - L1MEc LINE L1 -4645 1895 1306 1014 110 86 0 chr2 24045394 24045557 -226642297 - L1PA10 LINE L1 -1 6167 5991 409 262 182 14 chr2 24046237 24046451 -226641403 + L2 LINE L2 2594 2843 -471 357 261 148 0 chr2 24046649 24046764 -226641090 + L2 LINE L2 3182 3313 0 1033 204 33 0 chr2 24048667 24048878 -226638976 - L1MA9 LINE L1 -45 6267 6050 3379 113 87 4 chr2 24048887 24049427 -226638427 - MER51C LTR ERV1 -11 629 45 2719 153 23 50 chr2 24049447 24049595 -226638259 - L1MA9 LINE L1 -248 6064 5914 4015 91 16 4 chr2 24049595 24050142 -226637712 - MER41A LTR ERV1 0 554 1 2719 153 23 50 chr2 24050142 24050549 -226637305 - L1MA9 LINE L1 -398 5914 5524 37094 33 3 1 chr2 24050569 24055784 -226632070 - L1PA4 LINE L1 -3 6152 926 1556 150 62 126 chr2 24055789 24055943 -226631911 - LTR10A LTR ERV1 0 609 447 2229 78 3 0 chr2 24055943 24056226 -226631628 - AluY SINE Alu -27 284 1 1556 150 62 126 chr2 24056226 24056525 -226631329 - LTR10A LTR ERV1 -162 447 185 1374 152 18 72 chr2 24056643 24057011 -226630843 - L1MA9 LINE L1 -743 5403 5131 500 262 84 69 chr2 24057066 24057471 -226630383 - MLT1J1 LTR MaLR -31 415 5 186 296 0 0 chr2 24058004 24058048 -226629806 - L2 LINE L2 -19 3253 3210 2383 85 0 0 chr2 24059286 24059593 -226628261 + AluSx SINE Alu 1 307 -5 410 286 113 0 chr2 24059723 24059856 -226627998 - MIR3 SINE MIR -41 167 20 1889 113 0 0 chr2 24062030 24062295 -226625559 + AluSx SINE Alu 23 287 -25 286 269 117 80 chr2 24062557 24062881 -226624973 + L2 LINE L2 2904 3239 -33 568 279 131 27 chr2 24062919 24063141 -226624713 - MIR SINE MIR 0 262 18 1932 117 0 13 chr2 24067488 24067788 -226620066 + AluSx SINE Alu 17 312 0 236 304 38 13 chr2 24068178 24068257 -226619597 - L2 LINE L2 -40 3232 3152 667 237 89 8 chr2 24068746 24069034 -226618820 + MER46C DNA MER2_type 4 338 0 26 0 0 0 chr2 24070042 24070068 -226617786 + AT_rich Low_complexity Low_complexity 1 26 0 460 246 32 24 chr2 24071132 24071258 -226616596 - MIR SINE MIR -102 160 34 773 293 93 67 chr2 24071277 24072024 -226615830 - L1MEd LINE L1 -2330 3799 750 2238 107 0 0 chr2 24072527 24072827 -226615027 + AluSx SINE Alu 1 300 -12 1992 127 7 10 chr2 24073615 24073923 -226613931 + AluJo SINE Alu 1 307 -5 2286 75 3 0 chr2 24073945 24074240 -226613614 + AluY SINE Alu 1 296 -15 1216 93 0 0 chr2 24074240 24074402 -226613452 + AluY SINE Alu 133 294 -17 294 305 78 1 chr2 24075793 24075922 -226611932 - MIR SINE MIR -65 143 31 184 259 179 45 chr2 24076344 24076456 -226611398 + L2 LINE L2 3138 3264 -8 231 346 90 15 chr2 24077031 24077164 -226610690 - L2 LINE L2 -8 3264 3122 459 181 224 58 chr2 24078550 24078755 -226609099 - MER112 DNA MER1_type -14 246 8 2304 79 0 19 chr2 24079105 24079420 -226608434 + AluY SINE Alu 1 309 -2 2492 142 29 44 chr2 24079423 24079803 -226608051 + MER65A LTR ERV1 2 375 -70 2221 97 3 3 chr2 24079803 24080111 -226607743 - AluSx SINE Alu -2 310 3 2492 142 29 44 chr2 24080111 24080181 -226607673 + MER65A LTR ERV1 375 445 0 1609 153 10 27 chr2 24080555 24080850 -226607004 + AluJo SINE Alu 21 310 -2 222 37 0 0 chr2 24080890 24080917 -226606937 + (GGGGA)n Simple_repeat Simple_repeat 5 31 0 379 161 0 48 chr2 24080923 24081047 -226606807 + GA-rich Low_complexity Low_complexity 3 120 0 402 217 70 0 chr2 24081338 24081453 -226606401 + MER113 DNA MER1_type? 1 123 -398 2151 85 14 0 chr2 24081773 24082066 -226605788 - AluSx SINE Alu -15 297 1 300 316 190 39 chr2 24082077 24082618 -226605236 + L2 LINE L2 1326 1948 -1366 345 303 76 0 chr2 24082812 24082957 -226604897 - MER103 DNA DNA -8 158 3 236 281 16 0 chr2 24083065 24083129 -226604725 + MER3 DNA MER1_type 41 105 -104 188 262 119 24 chr2 24083228 24083312 -226604542 + L2 LINE L2 3169 3260 -12 371 282 17 86 chr2 24083342 24083516 -226604338 + LTR33 LTR ERVL 16 177 -344 594 114 0 0 chr2 24083646 24083725 -226604129 + AluS SINE Alu 2 80 -232 1476 118 0 0 chr2 24084070 24084281 -226603573 + AluSg/x SINE Alu 101 311 -1 903 249 81 92 chr2 24084282 24084774 -226603080 + L1MEd LINE L1 855 1338 -5078 1802 93 12 4 chr2 24084774 24085022 -226602832 + AluSq SINE Alu 1 250 -63 903 249 81 92 chr2 24085022 24085221 -226602633 + L1MEd LINE L1 1338 1538 -4878 350 272 114 30 chr2 24085372 24085574 -226602280 + L1MEd LINE L1 1739 2035 -4572 512 254 228 58 chr2 24085766 24086388 -226601466 + L1MEd LINE L1 2231 2972 -3454 1935 142 0 13 chr2 24086400 24086703 -226601151 + AluSx SINE Alu 1 299 -13 2800 258 96 35 chr2 24086858 24087583 -226600271 + L2 LINE L2 1942 2621 -692 2291 98 0 0 chr2 24087583 24087890 -226599964 + AluSq SINE Alu 1 307 -6 2800 258 96 35 chr2 24087890 24088449 -226599405 + L2 LINE L2 2621 3306 -7 184 219 0 0 chr2 24089139 24089171 -226598683 - L2 LINE L2 -1 3312 3281 294 290 48 0 chr2 24090645 24090707 -226597147 + MIR SINE MIR 14 78 -184 286 290 169 8 chr2 24090777 24090901 -226596953 - MIR SINE MIR -21 241 98 6877 157 26 20 chr2 24091054 24092764 -226595090 + L1MC1 LINE L1 4622 6333 0 4403 159 61 14 chr2 24092774 24093612 -226594242 + L1MB7 LINE L1 5299 6175 -9 1762 136 7 23 chr2 24093768 24093941 -226593913 - AluJb SINE Alu -5 307 140 198 0 0 0 chr2 24093941 24093963 -226593891 + (TCTA)n Simple_repeat Simple_repeat 2 23 0 1762 136 7 23 chr2 24093963 24094091 -226593763 - AluJb SINE Alu -172 140 11 377 285 131 8 chr2 24094173 24094303 -226593551 + MIR SINE MIR 7 152 -110 563 276 90 0 chr2 24094863 24095019 -226592835 + MER5B DNA MER1_type 9 178 0 200 254 134 15 chr2 24095390 24095457 -226592397 + L2 LINE L2 3235 3309 -4 28 91 0 0 chr2 24096436 24096513 -226591341 + AT_rich Low_complexity Low_complexity 1 77 0 188 0 74 0 chr2 24197405 24197432 -226490422 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 25 0 0 0 chr2 24198254 24198279 -226489575 + AT_rich Low_complexity Low_complexity 1 25 0 1996 97 4 0 chr2 24198665 24198924 -226488930 - AluSp SINE Alu -53 260 1 2262 107 10 0 chr2 24198974 24199274 -226488580 - AluSx SINE Alu -9 303 1 2668 49 0 0 chr2 24200291 24200596 -226487258 + AluY SINE Alu 1 305 -6 1812 156 0 17 chr2 24201245 24201547 -226486307 + AluJb SINE Alu 1 297 -15 934 145 104 35 chr2 24201647 24201789 -226486065 + L1PA13 LINE L1 5964 6082 -81 2399 58 0 3 chr2 24201789 24202080 -226485774 + AluY SINE Alu 3 292 -19 934 145 104 35 chr2 24202080 24202168 -226485686 + L1PA13 LINE L1 6082 6163 0 1979 139 43 23 chr2 24202261 24202563 -226485291 + AluSx SINE Alu 1 308 -4 384 281 114 9 chr2 24202675 24202789 -226485065 + L2 LINE L2 3147 3272 0 695 242 25 0 chr2 24203159 24203316 -226484538 + MLT1J2 LTR MaLR 63 223 -227 288 301 125 28 chr2 24203318 24203637 -226484217 - L1M4 LINE L1 -1947 4199 3850 2123 125 0 0 chr2 24203649 24203978 -226483876 - AluSx SINE Alu 0 329 1 1540 202 63 25 chr2 24204172 24204539 -226483315 - MER119 DNA MER1_type -54 529 149 1278 299 77 21 chr2 24204972 24205584 -226482270 + L1ME3A LINE L1 5299 5944 -226 2270 119 0 0 chr2 24206197 24206507 -226481347 + AluSq SINE Alu 2 311 -2 219 36 0 0 chr2 24207396 24207424 -226480430 + (CA)n Simple_repeat Simple_repeat 1 28 0 1804 101 3 84 chr2 24207425 24207722 -226480132 + AluY SINE Alu 21 293 -18 913 276 72 32 chr2 24207802 24208300 -226479554 + L1MEd LINE L1 893 1530 -960 2434 71 0 0 chr2 24208300 24208597 -226479257 + AluY SINE Alu 1 297 -14 913 276 72 32 chr2 24208597 24208724 -226479130 + L1MEd LINE L1 1530 1650 -840 718 116 0 0 chr2 24209035 24209130 -226478724 + AluS SINE Alu 5 99 -214 473 204 13 26 chr2 24209500 24209652 -226478202 + pTR5 LTR ERV1 1195 1344 -1094 3336 145 199 3 chr2 24209668 24210240 -226477614 + LTR12 LTR ERV1 5 688 0 313 167 0 0 chr2 24210249 24210297 -226477557 + AluJ/FLAM SINE Alu 37 84 -218 454 299 7 39 chr2 24210799 24210953 -226476901 + MLT1I LTR MaLR 71 219 -190 802 208 8 0 chr2 24211309 24211439 -226476415 - FLAM_A SINE Alu -2 131 1 1493 110 0 46 chr2 24211449 24211619 -226476235 - AluSg/x SINE Alu -15 295 136 2165 97 10 3 chr2 24211619 24211909 -226475945 - AluSg1 SINE Alu -17 292 1 1493 110 0 46 chr2 24211909 24211957 -226475897 - AluSg/x SINE Alu -174 136 87 200 286 79 0 chr2 24212286 24212349 -226475505 - MIR SINE MIR -13 249 182 432 239 301 23 chr2 24212808 24212984 -226474870 + MIR SINE MIR 24 248 -14 653 155 87 63 chr2 24213204 24213456 -226474398 - L1MC5 LINE L1 -125 7836 7579 1399 187 92 75 chr2 24213480 24214092 -226473762 - L1MC5 LINE L1 -450 7511 6821 180 0 0 0 chr2 24214316 24214336 -226473518 + (A)n Simple_repeat Simple_repeat 1 20 0 2241 121 0 0 chr2 24214493 24214798 -226473056 - AluSg SINE Alu -5 305 1 842 287 24 31 chr2 24214903 24215119 -226472735 - Charlie1a DNA MER1_type -2504 257 42 2045 148 64 29 chr2 24215119 24215496 -226472358 + MLT1B LTR MaLR 1 390 0 842 287 24 31 chr2 24215496 24215533 -226472321 - Charlie1a DNA MER1_type -2719 42 6 211 300 0 14 chr2 24216082 24216152 -226471702 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 395 285 114 34 chr2 24216254 24216552 -226471302 + L1MC/D LINE L1 5290 5607 -552 1086 209 29 5 chr2 24216621 24216831 -226471023 + MER20 DNA MER1_type 1 215 -4 1954 92 0 95 chr2 24217303 24217628 -226470226 + AluSq SINE Alu 1 294 -19 538 179 0 0 chr2 24217728 24217812 -226470042 + FRAM SINE Alu 69 152 -24 706 158 190 6 chr2 24217828 24217986 -226469868 - MER44D DNA MER2_type -134 475 19 2561 232 158 10 chr2 24218126 24219234 -226468620 - L1ME3 LINE L1 -2 6160 4901 414 277 71 0 chr2 24219244 24219356 -226468498 + FLAM_A SINE Alu 1 120 -13 2149 121 7 3 chr2 24219364 24219662 -226468192 - AluSx SINE Alu -13 299 1 23 33 0 0 chr2 24219687 24219717 -226468137 + AT_rich Low_complexity Low_complexity 1 30 0 264 59 0 0 chr2 24220716 24220750 -226467104 - Alu SINE Alu -262 38 5 513 327 115 32 chr2 24220759 24221132 -226466722 - L2 LINE L2 -105 3208 2805 2333 69 21 0 chr2 24221163 24221451 -226466403 + AluY SINE Alu 1 294 -17 209 222 16 0 chr2 24221486 24221549 -226466305 + (CA)n Simple_repeat Simple_repeat 2 65 0 309 195 345 18 chr2 24221549 24221662 -226466192 - MARNA DNA Mariner -422 164 15 262 345 18 0 chr2 24222140 24222250 -226465604 - L1ME LINE L1 -309 5855 5744 2193 104 0 3 chr2 24222264 24222551 -226465303 - AluSx SINE Alu -6 306 21 2151 112 0 3 chr2 24223658 24223953 -226463901 + AluSg SINE Alu 17 310 0 240 100 0 0 chr2 24225003 24225043 -226462811 + (A)n Simple_repeat Simple_repeat 1 40 0 348 183 217 35 chr2 24225151 24225266 -226462588 - L2 LINE L2 -3 3310 3175 1972 221 77 52 chr2 24225960 24226722 -226461132 + L1M4 LINE L1 2461 3241 -2905 1173 158 6 0 chr2 24226761 24226944 -226460910 - AluSg/x SINE Alu -9 303 120 641 122 52 0 chr2 24226944 24227059 -226460795 + MER58 DNA MER1_type 93 213 -2207 1072 176 49 15 chr2 24227064 24227268 -226460586 + MER58B DNA MER1_type 130 340 -1 434 191 11 11 chr2 24227822 24227911 -226459943 - Charlie1 DNA MER1_type 0 2761 2673 318 203 0 14 chr2 24228016 24228085 -226459769 + MLT2D LTR ERVL 60 127 -287 2046 126 14 0 chr2 24228085 24228370 -226459484 + AluSq SINE Alu 1 289 -24 243 0 0 0 chr2 24228370 24228397 -226459457 + (GA)n Simple_repeat Simple_repeat 2 28 0 681 151 12 84 chr2 24228477 24228643 -226459211 - MER3 DNA MER1_type 0 2585 2432 398 154 0 99 chr2 24228646 24228737 -226459117 - MER3 DNA MER1_type -95 114 33 180 235 0 20 chr2 24229364 24229415 -226458439 - L2 LINE L2 -313 3000 2951 451 283 100 6 chr2 24229474 24229654 -226458200 + LTR67 LTR ERVL 354 550 -7 654 291 90 4 chr2 24229731 24229975 -226457879 + L1MC/D LINE L1 5498 5762 -2046 217 231 77 0 chr2 24230483 24230535 -226457319 + MER91C DNA MER1_type 43 98 -42 661 94 19 38 chr2 24230753 24230859 -226456995 - Tigger7 DNA MER2_type 0 2491 2388 2142 133 0 0 chr2 24230864 24231165 -226456689 - AluSx SINE Alu -11 301 1 323 0 48 0 chr2 24231269 24231311 -226456543 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 275 338 70 7 chr2 24231543 24231685 -226456169 + MIR3 SINE MIR 37 187 -21 1466 138 176 0 chr2 24232070 24232309 -226455545 - AluJo SINE Alu -31 281 1 209 356 51 51 chr2 24233948 24234066 -226453788 + L2 LINE L2 3149 3266 -6 382 267 42 42 chr2 24234094 24234214 -226453640 - MARNA DNA Mariner -357 229 110 246 380 9 0 chr2 24234265 24234378 -226453476 + L2 LINE L2 2422 2535 -779 1075 201 12 52 chr2 24234550 24234799 -226453055 + MSTD LTR MaLR 1 239 -157 666 200 21 89 chr2 24234837 24234893 -226452961 + MSTD LTR MaLR 218 276 -120 1990 149 3 3 chr2 24234893 24235195 -226452659 + AluJb SINE Alu 1 302 -10 1701 134 141 4 chr2 24235201 24235463 -226452391 + AluSg SINE Alu 1 298 -2 666 200 21 89 chr2 24235463 24235589 -226452265 + MSTD LTR MaLR 281 394 -2 1875 163 0 3 chr2 24235643 24235937 -226451917 - AluJb SINE Alu -19 293 1 2260 116 0 22 chr2 24236879 24237197 -226450657 - AluSq SINE Alu -2 311 1 363 314 70 30 chr2 24237200 24237416 -226450438 - MIR3 SINE MIR -21 187 2 1785 171 0 7 chr2 24237628 24237909 -226449945 - AluJb SINE Alu -33 279 1 41 36 0 0 chr2 24238087 24238142 -226449712 + AT_rich Low_complexity Low_complexity 1 55 0 552 283 11 60 chr2 24238415 24238599 -226449255 + MER5B DNA MER1_type 2 176 -2 2434 88 0 0 chr2 24238757 24239064 -226448790 + AluSc SINE Alu 3 309 0 413 131 0 159 chr2 24239231 24239338 -226448516 - L1MA8 LINE L1 -5 6286 6197 3468 147 76 21 chr2 24239376 24239956 -226447898 + LTR9 LTR ERV1 1 612 0 478 204 32 0 chr2 24239976 24240069 -226447785 + MIR SINE MIR 45 140 -122 957 247 100 53 chr2 24240106 24240599 -226447255 - MER77 LTR ERV1 -4 601 182 533 95 0 0 chr2 24240710 24240784 -226447070 - SVA Other Other -783 603 530 253 161 71 18 chr2 24240786 24240842 -226447012 - MER21B LTR ERV1 -665 198 140 * 258 128 85 0 chr2 24240821 24240868 -226446986 - MER77 LTR ERV1 -394 211 161 1825 169 3 7 chr2 24240970 24241277 -226446577 + AluJb SINE Alu 1 306 -6 303 261 22 22 chr2 24241358 24241450 -226446404 + MIR SINE MIR 171 262 0 2031 111 38 49 chr2 24241743 24242087 -226445767 - L1PA15 LINE L1 -1 6164 5825 1869 133 46 0 chr2 24242089 24242374 -226445480 - AluSx SINE Alu -14 298 1 1561 215 33 26 chr2 24242750 24243202 -226444652 + pTR5 LTR ERV1 743 1197 -1241 2289 86 3 17 chr2 24243870 24244172 -226443682 - AluSp SINE Alu -15 298 1 36 53 0 0 chr2 24244660 24244717 -226443137 + AT_rich Low_complexity Low_complexity 1 57 0 320 244 115 63 chr2 24246327 24246753 -226441101 - L1ME4a LINE L1 -11 6110 5663 424 274 185 45 chr2 24246767 24247146 -226440708 - L2 LINE L2 -856 2458 2027 351 269 43 21 chr2 24248787 24248880 -226438974 + L2 LINE L2 3197 3291 -22 269 350 97 13 chr2 24249021 24249247 -226438607 - MIR SINE MIR -16 246 2 771 279 52 22 chr2 24249375 24249604 -226438250 + MIR SINE MIR 1 236 -26 433 246 79 28 chr2 24249725 24249889 -226437965 - MER5A DNA MER1_type 0 189 7 1720 177 0 49 chr2 24249952 24250280 -226437574 + AluJb SINE Alu 1 312 0 12447 145 29 8 chr2 24250601 24252894 -226434960 + L1PA16 LINE L1 850 3191 -3658 3819 156 16 0 chr2 24252894 24253530 -226434324 + L1PA16 LINE L1 6217 6862 -7 281 279 59 76 chr2 24253588 24254041 -226433813 + L1MEd LINE L1 593 1037 -5082 2171 91 16 56 chr2 24254041 24254360 -226433494 + AluY SINE Alu 1 306 -5 281 279 59 76 chr2 24254360 24254430 -226433424 + L1MEd LINE L1 1037 1107 -5012 432 229 134 55 chr2 24254449 24254836 -226433018 + L1MEd LINE L1 2767 3197 -2932 962 145 23 23 chr2 24254836 24255008 -226432846 - FAM SINE Alu -3 172 1 432 229 134 55 chr2 24255008 24255074 -226432780 + L1MEd LINE L1 3197 3256 -2873 411 172 0 11 chr2 24255218 24255311 -226432543 + L1MC3 LINE L1 7007 7098 -687 230 197 79 92 chr2 24255312 24255388 -226432466 + MLT1F1 LTR MaLR 37 111 -456 1782 166 89 111 chr2 24255390 24255915 -226431939 + L1MD3 LINE L1 7389 7900 -95 1872 108 56 0 chr2 24255915 24256235 -226431619 + AluY SINE Alu 1 335 0 1782 166 89 111 chr2 24256235 24256328 -226431526 + L1MD3 LINE L1 7900 7994 -1 382 197 123 33 chr2 24256627 24256749 -226431105 + L1MEd LINE L1 3524 3656 -2473 2217 88 0 14 chr2 24256779 24257076 -226430778 - AluY SINE Alu -18 293 1 1905 173 0 0 chr2 24257179 24257463 -226430391 - AluJb SINE Alu -23 289 6 27 0 0 0 chr2 24257762 24257789 -226430065 + AT_rich Low_complexity Low_complexity 1 27 0 659 153 90 0 chr2 24258278 24258389 -226429465 - 5S rRNA rRNA 0 121 1 22 0 0 0 chr2 24258506 24258528 -226429326 + AT_rich Low_complexity Low_complexity 1 22 0 35 24 0 0 chr2 24258924 24258966 -226428888 + AT_rich Low_complexity Low_complexity 1 42 0 6690 151 123 54 chr2 24259210 24260663 -226427191 - MER52A LTR ERV1 0 1755 204 276 221 234 0 chr2 24260664 24260741 -226427113 - MER52A LTR ERV1 -1660 95 1 2065 115 31 7 chr2 24261408 24261694 -226426160 - AluSx SINE Alu -19 293 1 2128 79 7 17 chr2 24263532 24263824 -226424030 - AluSq SINE Alu -11 302 14 1975 133 0 13 chr2 24264002 24264310 -226423544 - AluJb SINE Alu -5 307 4 1553 210 17 17 chr2 24265021 24265321 -226422533 - AluJo SINE Alu -12 300 1 2198 121 3 13 chr2 24265427 24265742 -226422112 - AluSx SINE Alu 0 312 1 1737 168 0 0 chr2 24266026 24266306 -226421548 - AluJb SINE Alu -31 281 2 51 42 0 0 chr2 24266432 24266504 -226421350 + AT_rich Low_complexity Low_complexity 1 72 0 12509 119 45 8 chr2 24266826 24268915 -226418939 - Tigger1 DNA MER2_type -1 2417 250 1122 178 6 24 chr2 24268916 24269168 -226418686 - MER52A LTR ERV1 -644 1111 903 2003 113 15 0 chr2 24269341 24269615 -226418239 + AluSx SINE Alu 26 303 -9 744 267 52 14 chr2 24269647 24269935 -226417919 + L1MC4a LINE L1 5597 5895 -1913 1506 186 21 48 chr2 24270163 24270308 -226417546 + AluJo SINE Alu 1 136 -176 2212 105 3 13 chr2 24270308 24270612 -226417242 + AluSx SINE Alu 1 301 -11 1506 186 21 48 chr2 24270612 24270756 -226417098 + AluJo SINE Alu 136 282 -30 1034 166 11 0 chr2 24271223 24271398 -226416456 - MSTD LTR MaLR -1 395 219 286 275 202 14 chr2 24271403 24271509 -226416345 - MLT1K LTR MaLR -53 535 450 231 36 0 0 chr2 24271509 24271537 -226416317 + (TC)n Simple_repeat Simple_repeat 1 28 0 286 275 202 14 chr2 24271537 24271648 -226416206 - MLT1K LTR MaLR -138 450 277 229 250 0 31 chr2 24272600 24272664 -226415190 + MLT1L LTR MaLR 3 64 -551 580 95 9 2 chr2 24273143 24273365 -226414489 + AluSx SINE Alu 1 268 -44 282 370 80 13 chr2 24273641 24273879 -226413975 + L3 LINE CR1 1319 1572 -5 2063 107 0 52 chr2 24273959 24274287 -226413567 - AluSx SINE Alu -1 311 1 259 200 0 0 chr2 24274413 24274468 -226413386 + MLT1L LTR MaLR 550 604 -11 1356 113 13 26 chr2 24274617 24274846 -226413008 + MER1B DNA MER1_type 110 335 -4 2441 70 0 22 chr2 24274846 24275161 -226412693 + AluY SINE Alu 1 308 -3 1543 152 33 63 chr2 24275451 24275754 -226412100 + AluJo SINE Alu 1 294 -18 1046 105 0 0 chr2 24275820 24275953 -226411901 + AluSq/x SINE Alu 1 133 -180 2062 111 20 3 chr2 24275955 24276253 -226411601 + AluSg SINE Alu 1 303 -7 1502 164 106 4 chr2 24276775 24277049 -226410805 - AluJb SINE Alu -10 302 1 21 57 0 0 chr2 24277083 24277118 -226410736 + AT_rich Low_complexity Low_complexity 1 35 0 2495 78 7 0 chr2 24277254 24277563 -226410291 - AluY SINE Alu 0 311 1 202 298 0 0 chr2 24277936 24277983 -226409871 + (CA)n Simple_repeat Simple_repeat 2 48 0 333 250 83 13 chr2 24278004 24278160 -226409694 + L1ME LINE L1 5655 5821 -341 225 214 146 22 chr2 24278363 24278452 -226409402 + L1MC4 LINE L1 7933 8032 -10 191 333 98 8 chr2 24278609 24278741 -226409113 - MIR SINE MIR -59 203 60 270 352 98 26 chr2 24278824 24279017 -226408837 + L3 LINE CR1 911 1117 -460 298 316 10 10 chr2 24279017 24279115 -226408739 + L3 LINE CR1 1329 1426 -151 1761 182 111 5 chr2 24279653 24280355 -226407499 + L1MB7 LINE L1 4939 5734 -446 2109 148 22 0 chr2 24280356 24280727 -226407127 + L1MB7 LINE L1 5790 6168 -16 1626 151 17 48 chr2 24280927 24281219 -226406635 + AluJo SINE Alu 10 292 -20 2202 94 14 3 chr2 24281223 24281510 -226406344 + AluSq SINE Alu 1 290 -23 560 313 114 9 chr2 24282217 24282444 -226405410 + MIR SINE MIR 1 251 -11 597 159 138 94 chr2 24282687 24283007 -226404847 + L1MC5 LINE L1 7209 7542 -419 864 127 6 6 chr2 24283967 24284125 -226403729 + L1MA4 LINE L1 6143 6300 0 750 230 87 32 chr2 24284164 24284382 -226403472 - MIR SINE MIR -32 230 2 339 246 72 14 chr2 24285073 24285211 -226402643 - L1ME LINE L1 -458 5663 5518 826 273 26 18 chr2 24285279 24285506 -226402348 + MIR SINE MIR 5 233 -29 1912 183 137 2 chr2 24285540 24285978 -226401876 + LTR65 LTR ERV1 1 497 -172 2316 109 0 0 chr2 24286250 24286553 -226401301 - AluSx SINE Alu -9 303 1 251 211 18 0 chr2 24287044 24287101 -226400753 - L1MC/D LINE L1 -2056 5752 5695 375 252 35 0 chr2 24287436 24287551 -226400303 - L1ME4a LINE L1 -27 6094 5976 2168 83 2 139 chr2 24287580 24287991 -226399863 - THE1A LTR MaLR 0 355 1 10140 85 6 1 chr2 24287991 24289387 -226398467 - THE1A-int LTR MaLR 0 1580 178 494 257 107 14 chr2 24290322 24290462 -226397392 - L2 LINE L2 -3 3310 3158 361 281 0 0 chr2 24291092 24291174 -226396680 - MIR3 SINE MIR -51 157 76 2398 104 0 0 chr2 24291478 24291787 -226396067 + AluSx SINE Alu 1 309 -3 2418 110 11 0 chr2 24291805 24292177 -226395677 + L1P4 LINE L1 5408 5783 -378 2043 131 0 20 chr2 24292390 24292695 -226395159 - AluSx SINE Alu -13 299 1 2573 72 0 0 chr2 24292967 24293272 -226394582 - AluY SINE Alu -6 305 1 24 53 0 0 chr2 24293611 24293649 -226394205 + AT_rich Low_complexity Low_complexity 1 38 0 189 107 0 0 chr2 24293663 24293691 -226394163 + (TA)n Simple_repeat Simple_repeat 2 29 0 1916 121 0 0 chr2 24293691 24293940 -226393914 - AluSx SINE Alu -22 290 42 23 33 0 0 chr2 24293956 24293986 -226393868 + AT_rich Low_complexity Low_complexity 1 30 0 1113 181 4 73 chr2 24294027 24294090 -226393764 + AluJo SINE Alu 86 152 -160 2214 122 0 0 chr2 24294090 24294386 -226393468 + AluSx SINE Alu 1 296 -16 1113 181 4 73 chr2 24294386 24294554 -226393300 + AluJo SINE Alu 152 301 -11 298 217 14 0 chr2 24294607 24294676 -226393178 + MER112 DNA MER1_type 2 71 -189 351 0 0 0 chr2 24294677 24294716 -226393138 + (TG)n Simple_repeat Simple_repeat 2 40 0 273 143 286 0 chr2 24294767 24294830 -226393024 + MER112 DNA MER1_type 174 254 -6 2741 98 8 0 chr2 24296584 24296950 -226390904 - L1PA13 LINE L1 -3 6160 5792 1859 84 21 0 chr2 24296951 24297190 -226390664 + L1PA13 LINE L1 5524 5767 -394 198 0 0 0 chr2 24297214 24297236 -226390618 + (TTG)n Simple_repeat Simple_repeat 3 24 0 260 270 110 10 chr2 24297456 24297556 -226390298 - MIR SINE MIR -65 197 88 208 430 39 12 chr2 24297611 24297867 -226389987 + L2 LINE L2 2430 2692 -622 2439 42 0 11 chr2 24298972 24299281 -226388573 + AluY SINE Alu 1 306 0 21 0 0 0 chr2 24299281 24299302 -226388552 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 24299419 24299448 -226388406 + AT_rich Low_complexity Low_complexity 1 29 0 1404 164 5 5 chr2 24299479 24299699 -226388155 - AluJo SINE Alu -92 220 1 367 311 40 13 chr2 24299779 24299930 -226387924 - MIR SINE MIR -102 160 6 316 224 204 0 chr2 24299926 24300024 -226387830 - L2 LINE L2 -2 3311 3194 * 805 172 240 30 chr2 24300025 24300258 -226387596 + MLT1J1 LTR MaLR 2 283 -163 2342 81 3 0 chr2 24300339 24300637 -226387217 - AluSp SINE Alu -14 299 1 2876 130 82 13 chr2 24300688 24301165 -226386689 + L1PA16 LINE L1 5657 6166 0 386 245 48 53 chr2 24301602 24301790 -226386064 - HAL1 LINE L1 -327 2180 1994 2460 74 0 3 chr2 24302022 24302321 -226385533 - AluSq SINE Alu -15 298 1 326 304 133 57 chr2 24302430 24302957 -226384897 - L2 LINE L2 -820 2494 1928 443 231 93 9 chr2 24302991 24303099 -226384755 + MLT1J LTR MaLR 395 511 0 22 35 0 0 chr2 24303548 24303577 -226384277 + AT_rich Low_complexity Low_complexity 1 29 0 247 302 0 35 chr2 24303841 24303957 -226383897 + HAL1b LINE L1 313 424 -924 222 286 86 0 chr2 24304519 24304589 -226383265 - L2 LINE L2 -8 3264 3189 1707 166 68 91 chr2 24304591 24305044 -226382810 - MSTB2 LTR MaLR 0 457 15 210 276 9 67 chr2 24305166 24305271 -226382583 - L2 LINE L2 -183 3089 2991 882 320 89 42 chr2 24305296 24305984 -226381870 - L2 LINE L2 -453 2861 2142 1712 180 17 3 chr2 24306025 24306320 -226381534 + AluJo SINE Alu 1 299 -13 3382 186 26 6 chr2 24306371 24307027 -226380827 + L1MC3 LINE L1 6371 7039 -746 255 175 0 150 chr2 24307074 24307154 -226380700 + MLT1F1 LTR MaLR 35 102 -465 191 344 38 15 chr2 24307154 24307285 -226380569 - L2 LINE L2 -1323 1991 1858 2144 109 14 0 chr2 24307368 24307653 -226380201 - AluSx SINE Alu -23 289 1 438 169 0 28 chr2 24307714 24307785 -226380069 + AluJ/FRAM SINE Alu 228 296 -16 698 236 108 56 chr2 24308228 24308646 -226379208 - MLT1H1 LTR MaLR -55 494 32 265 319 0 0 chr2 24309082 24309154 -226378700 + L1MC/D LINE L1 5564 5635 -2173 2328 99 0 3 chr2 24309271 24309573 -226378281 + AluY SINE Alu 1 301 -10 2246 125 62 28 chr2 24309656 24310008 -226377846 - THE1B LTR MaLR 0 364 1 10385 102 24 9 chr2 24310008 24311140 -226376714 - THE1B-int LTR MaLR 0 1580 420 2284 88 0 14 chr2 24311140 24311434 -226376420 - AluY SINE Alu -21 290 1 10385 102 24 9 chr2 24311434 24311742 -226376112 - THE1B-int LTR MaLR -1160 420 118 357 125 0 0 chr2 24311844 24311900 -226375954 + (A)n Simple_repeat Simple_repeat 1 56 0 874 218 24 0 chr2 24311913 24312083 -226375771 - AluJb SINE Alu -2 310 137 297 274 0 24 chr2 24312100 24312184 -226375670 + L2 LINE L2 3228 3309 -4 437 299 29 58 chr2 24312194 24312608 -226375246 + L1M4 LINE L1 2451 2852 -3294 1984 127 21 0 chr2 24312737 24313061 -226374793 + AluSx SINE Alu 4 312 0 21 57 0 0 chr2 24313165 24313200 -226374654 + AT_rich Low_complexity Low_complexity 1 35 0 795 257 68 89 chr2 24313347 24313777 -226374077 + L1M4 LINE L1 3631 4047 -2099 1308 170 158 19 chr2 24313777 24313923 -226373931 + AluJb SINE Alu 1 125 -177 2219 117 0 3 chr2 24313923 24314221 -226373633 + AluSx SINE Alu 1 297 -15 1308 170 158 19 chr2 24314221 24314339 -226373515 + AluJb SINE Alu 125 302 0 795 257 68 89 chr2 24314339 24314492 -226373362 + L1M4 LINE L1 4047 4202 -1944 3494 194 32 57 chr2 24314493 24315364 -226372490 - L1MCb LINE L1 -4958 1087 239 263 186 29 57 chr2 24315366 24315436 -226372418 + Charlie1 DNA MER1_type 1589 1656 -1105 58 38 0 0 chr2 24315436 24315515 -226372339 + AT_rich Low_complexity Low_complexity 1 79 0 917 119 0 0 chr2 24315518 24315636 -226372218 - FLAM_C SINE Alu -15 118 1 5057 170 70 31 chr2 24315637 24315651 -226372203 + Charlie1 DNA MER1_type 1630 1642 -1119 2326 107 0 0 chr2 24315651 24315949 -226371905 - AluSx SINE Alu -14 298 1 5057 170 70 31 chr2 24315949 24317019 -226370835 + Charlie1 DNA MER1_type 1642 2756 -5 2258 94 0 0 chr2 24317043 24317330 -226370524 + AluSg SINE Alu 1 287 -23 322 325 35 30 chr2 24317352 24317521 -226370333 + L1MC/D LINE L1 5672 5841 -1967 2084 132 0 0 chr2 24317521 24317817 -226370037 + AluSx SINE Alu 1 296 -16 2403 101 0 0 chr2 24317980 24318287 -226369567 + AluSc SINE Alu 1 307 -2 189 0 0 0 chr2 24320264 24320285 -226367569 + (ATG)n Simple_repeat Simple_repeat 1 21 0 609 266 75 111 chr2 24320297 24320831 -226367023 - MLT1K LTR MaLR 0 588 74 2197 106 26 0 chr2 24320984 24321286 -226366568 + AluSp SINE Alu 1 310 -3 23 0 0 0 chr2 24321860 24321883 -226365971 + AT_rich Low_complexity Low_complexity 1 23 0 2264 103 3 3 chr2 24322428 24322729 -226365125 + AluSx SINE Alu 1 301 -11 267 392 32 18 chr2 24323638 24323948 -226363906 - L2 LINE L2 -240 3032 2719 3321 220 60 49 chr2 24324808 24325918 -226361936 - Charlie7 DNA MER1_type -17 2595 1474 2479 80 3 0 chr2 24326055 24326366 -226361488 + AluSp SINE Alu 1 312 -1 290 340 21 37 chr2 24328027 24328218 -226359636 + L2 LINE L2 3124 3311 -2 324 223 82 100 chr2 24328521 24328741 -226359113 + L1MCa LINE L1 1318 1533 -4893 2271 90 14 0 chr2 24328779 24329068 -226358786 - AluSg SINE Alu -17 293 1 375 302 10 0 chr2 24329284 24329380 -226358474 + MIR SINE MIR 46 142 -120 292 172 0 35 chr2 24329392 24329450 -226358404 + L2 LINE L2 3256 3311 -2 238 302 42 21 chr2 24329705 24329801 -226358053 + MIR3 SINE MIR 103 200 -8 271 308 115 0 chr2 24330323 24330453 -226357401 - MIR3 SINE MIR -9 199 55 323 274 158 21 chr2 24330557 24330747 -226357107 - MIR SINE MIR -29 233 18 28 61 0 0 chr2 24334486 24334535 -226353319 + GC_rich Low_complexity Low_complexity 1 49 0 308 302 126 39 chr2 24334757 24335042 -226352812 + L1M2 LINE L1 608 917 -5932 201 74 0 0 chr2 24335196 24335223 -226352631 + (CCG)n Simple_repeat Simple_repeat 2 28 0 197 56 0 56 chr2 24335262 24335298 -226352556 + (CCCG)n Simple_repeat Simple_repeat 3 36 0 21 0 0 0 chr2 24335316 24335337 -226352517 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 24335375 24335412 -226352442 + GC_rich Low_complexity Low_complexity 1 37 0 239 216 0 0 chr2 24335489 24335540 -226352314 + C-rich Low_complexity Low_complexity 4 54 0 235 258 88 44 chr2 24335638 24335797 -226352057 + MIR3 SINE MIR 1 166 -42 194 333 42 0 chr2 24336109 24336181 -226351673 + L3 LINE CR1 1405 1479 -98 216 162 0 0 chr2 24336637 24336674 -226351180 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 193 329 105 22 chr2 24336949 24337177 -226350677 + L2 LINE L2 1914 2160 -1154 2347 83 0 3 chr2 24337407 24337708 -226350146 - AluSq SINE Alu -11 302 3 2008 99 0 87 chr2 24338521 24338843 -226349011 + AluSx SINE Alu 17 310 -2 2187 223 50 41 chr2 24338866 24339449 -226348405 + L1ME3A LINE L1 5557 6144 -26 191 314 0 0 chr2 24339639 24339690 -226348164 - L3 LINE CR1 -15 1562 1512 1764 112 98 0 chr2 24340487 24340764 -226347090 + AluY SINE Alu 1 304 -7 2408 80 0 3 chr2 24340770 24341070 -226346784 + AluSq SINE Alu 1 299 -14 346 291 95 25 chr2 24341610 24341768 -226346086 - L1MEd LINE L1 -5945 174 6 24 0 0 0 chr2 24341833 24341857 -226345997 + AT_rich Low_complexity Low_complexity 1 24 0 757 147 7 73 chr2 24342546 24342696 -226345158 - AluJo SINE Alu -89 223 84 396 309 0 0 chr2 24342697 24342791 -226345063 + L2 LINE L2 2727 2820 -494 1572 169 6 98 chr2 24343156 24343493 -226344361 + AluJo SINE Alu 1 306 -6 1969 175 19 30 chr2 24343749 24344115 -226343739 + MLT1A1 LTR MaLR 4 365 0 818 263 79 4 chr2 24344218 24344446 -226343408 + MIR SINE MIR 1 245 -17 835 186 0 0 chr2 24344451 24344580 -226343274 - FLAM_C SINE Alu -4 129 1 216 316 158 9 chr2 24344599 24344713 -226343141 + L2 LINE L2 3179 3309 -4 2528 93 48 25 chr2 24345265 24345621 -226342233 + THE1B LTR MaLR 1 364 0 360 152 45 89 chr2 24345672 24345784 -226342070 + L1ME4a LINE L1 5949 6055 -66 1653 296 39 10 chr2 24345848 24346335 -226341519 + MLT1J LTR MaLR 8 508 -3 480 286 89 17 chr2 24346489 24346736 -226341118 + L1ME3A LINE L1 5645 5906 -264 863 164 11 32 chr2 24347219 24347416 -226340438 - L1MC3 LINE L1 0 7785 7613 24 0 0 0 chr2 24347540 24347564 -226340290 + AT_rich Low_complexity Low_complexity 1 24 0 2334 74 3 13 chr2 24348492 24348791 -226339063 - AluSg SINE Alu -14 296 1 1992 113 10 27 chr2 24348791 24349091 -226338763 - AluSx SINE Alu -17 295 1 2486 64 0 0 chr2 24349210 24349506 -226338348 - AluY SINE Alu -15 296 1 203 189 0 0 chr2 24350353 24350390 -226337464 + A-rich Low_complexity Low_complexity 1 37 0 205 276 92 59 chr2 24350659 24350811 -226337043 + MIR SINE MIR 21 177 -85 205 267 0 0 chr2 24350878 24350923 -226336931 + L2 LINE L2 3266 3310 -3 186 208 0 0 chr2 24351543 24351591 -226336263 + (ATG)n Simple_repeat Simple_repeat 1 48 0 365 264 62 56 chr2 24351591 24351735 -226336119 - MIR SINE MIR -2 260 116 181 287 19 83 chr2 24351900 24352008 -226335846 - MIR3 SINE MIR -16 192 92 2363 83 10 0 chr2 24352085 24352386 -226335468 - AluSx SINE Alu -8 304 1 207 337 21 105 chr2 24352648 24352838 -226335016 - L2 LINE L2 -209 3063 2890 186 43 0 0 chr2 24353185 24353208 -226334646 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1851 149 29 19 chr2 24353741 24353910 -226333944 - AluJo SINE Alu -1 311 136 2270 104 0 13 chr2 24353910 24354219 -226333635 - AluSx SINE Alu -7 305 1 1851 149 29 19 chr2 24354219 24354357 -226333497 - AluJo SINE Alu -176 136 1 189 252 92 76 chr2 24354401 24354520 -226333334 - MIR SINE MIR -107 155 35 286 287 46 0 chr2 24354534 24354621 -226333233 + MIR SINE MIR 56 146 -116 22 0 0 0 chr2 24354801 24354823 -226333031 + AT_rich Low_complexity Low_complexity 1 22 0 363 286 18 18 chr2 24354869 24354981 -226332873 - L2 LINE L2 -3 3310 3199 1655 156 9 58 chr2 24355858 24356186 -226331668 + AluJb SINE Alu 1 312 0 433 247 294 4 chr2 24356391 24356646 -226331208 - L2 LINE L2 -812 2502 2174 194 309 56 16 chr2 24358076 24358202 -226329652 + L3 LINE CR1 639 769 -808 199 324 69 20 chr2 24358241 24358343 -226329511 - MIR SINE MIR -3 259 153 2328 276 66 73 chr2 24359263 24360019 -226327835 - L1MEc LINE L1 -4842 1879 1138 2510 77 0 0 chr2 24360019 24360330 -226327524 - AluY SINE Alu 0 311 1 2328 276 66 73 chr2 24360330 24361089 -226326765 - L1MEc LINE L1 -5583 1138 375 931 282 56 11 chr2 24361935 24362293 -226325561 - HsTC2 DNA Tc2 -1043 855 482 5513 213 64 51 chr2 24363766 24365398 -226322456 - L1MDa LINE L1 -4691 1849 196 * 7363 160 36 10 chr2 24365376 24367423 -226320431 + L1MA5 LINE L1 3681 5804 -496 1380 127 47 4 chr2 24367523 24367776 -226320078 + L1MA5 LINE L1 6027 6290 -10 235 326 84 22 chr2 24368418 24368596 -226319258 - MIR SINE MIR -17 245 57 23 68 0 0 chr2 24369207 24369251 -226318603 + AT_rich Low_complexity Low_complexity 1 44 0 319 236 199 29 chr2 24369348 24369589 -226318265 - L1M4 LINE L1 -1300 4846 4565 2228 97 0 3 chr2 24369589 24369899 -226317955 + AluSx SINE Alu 1 309 -3 369 174 14 0 chr2 24369899 24369968 -226317886 + AluSc SINE Alu 132 201 -98 582 217 0 8 chr2 24369973 24370121 -226317733 - AluJb SINE Alu 0 309 163 881 171 162 44 chr2 24370122 24370350 -226317504 - AluSq SINE Alu -58 255 1 318 302 47 44 chr2 24370782 24371061 -226316793 - L1ME LINE L1 -5949 581 34 328 292 96 88 chr2 24371107 24371367 -226316487 - HAL1 LINE L1 -1430 1077 816 338 333 85 0 chr2 24371375 24371516 -226316338 - MER5A DNA MER1_type 0 189 37 180 0 0 0 chr2 24371675 24371695 -226316159 + (TCCCC)n Simple_repeat Simple_repeat 4 23 0 1348 222 33 0 chr2 24371695 24371970 -226315884 - AluJo SINE Alu -26 286 3 372 88 0 0 chr2 24373227 24373284 -226314570 + (TG)n Simple_repeat Simple_repeat 1 57 0 661 280 43 14 chr2 24374411 24374622 -226313232 + L2 LINE L2 3091 3307 -6 532 226 48 30 chr2 24374949 24375117 -226312737 + MIR SINE MIR 92 262 0 218 315 46 54 chr2 24375224 24375354 -226312500 + L2 LINE L2 2888 3016 -256 31 26 0 0 chr2 24375368 24375406 -226312448 + AT_rich Low_complexity Low_complexity 1 38 0 414 244 207 6 chr2 24375538 24375702 -226312152 + L2 LINE L2 3117 3313 0 234 0 0 0 chr2 24376175 24376201 -226311653 + (T)n Simple_repeat Simple_repeat 1 26 0 438 276 51 39 chr2 24377219 24377375 -226310479 - MIR3 SINE MIR -25 183 26 21 57 0 0 chr2 24378806 24378841 -226309013 + AT_rich Low_complexity Low_complexity 1 35 0 217 162 0 0 chr2 24379643 24379680 -226308174 - L2 LINE L2 0 3272 3236 216 264 209 0 chr2 24380873 24380964 -226306890 + L2 LINE L2 3204 3313 0 2165 160 26 50 chr2 24381035 24381094 -226306760 - MLT2D LTR ERVL 0 414 355 201 39 0 0 chr2 24381094 24381120 -226306734 + (CTGGGG)n Simple_repeat Simple_repeat 1 26 0 2165 160 26 50 chr2 24381120 24381378 -226306476 - MLT2D LTR ERVL -59 355 107 2920 52 0 0 chr2 24381378 24381742 -226306112 - L1PA5 LINE L1 -1 6153 5790 2165 160 26 50 chr2 24381742 24381842 -226306012 - MLT2D LTR ERVL -307 107 6 621 197 0 48 chr2 24382352 24382499 -226305355 - L1PA16 LINE L1 0 6166 6027 269 363 51 61 chr2 24383387 24383682 -226304172 + L2 LINE L2 2685 2976 -338 705 189 0 8 chr2 24383738 24383860 -226303994 + FLAM_C SINE Alu 1 121 -12 321 272 48 72 chr2 24384140 24384265 -226303589 + L2 LINE L2 3175 3296 -17 456 316 51 6 chr2 24384403 24384561 -226303293 - MIR3 SINE MIR -9 199 35 1220 159 71 128 chr2 24385147 24385720 -226302134 - L1MA9 LINE L1 -25 6266 5787 327 65 0 0 chr2 24385720 24385766 -226302088 + (TG)n Simple_repeat Simple_repeat 2 47 0 1220 159 71 128 chr2 24385766 24385869 -226301985 - L1MA9 LINE L1 -504 5787 5680 1826 134 7 10 chr2 24385869 24386167 -226301687 - L1PB3 LINE L1 -1 6153 5857 33755 69 5 9 chr2 24386172 24391548 -226296306 + L1PA6 LINE L1 803 6153 -1 2141 186 37 14 chr2 24391551 24391982 -226295872 - L1MA8 LINE L1 -423 5868 5428 1282 238 3 33 chr2 24393365 24393668 -226294186 + AluJo SINE Alu 1 294 -8 394 280 84 76 chr2 24393669 24393817 -226294037 + L3 LINE CR1 543 695 -882 2215 103 3 0 chr2 24393817 24394117 -226293737 + AluY SINE Alu 1 301 -10 394 280 84 76 chr2 24394117 24394243 -226293611 + L3 LINE CR1 695 819 -758 4454 190 38 20 chr2 24394326 24394354 -226293500 + L1MA9 LINE L1 4928 4954 -1358 2025 154 0 3 chr2 24394354 24394660 -226293194 + AluJb SINE Alu 1 305 -7 4454 190 38 20 chr2 24394660 24395909 -226291945 + L1MA9 LINE L1 4954 6228 -84 981 166 60 10 chr2 24395909 24396108 -226291746 + MER2 DNA MER2_type 2 210 -135 289 109 0 0 chr2 24396216 24396262 -226291592 + L1MA9 LINE L1 6228 6273 -39 320 130 0 19 chr2 24396275 24396329 -226291525 - Alu SINE Alu -8 294 242 21 0 0 0 chr2 24396344 24396365 -226291489 + AT_rich Low_complexity Low_complexity 1 21 0 580 310 64 86 chr2 24396776 24397154 -226290700 + L3 LINE CR1 1028 1396 -181 2023 124 10 7 chr2 24397154 24397453 -226290401 + AluSx SINE Alu 1 300 -12 580 310 64 86 chr2 24397453 24397529 -226290325 + L3 LINE CR1 1396 1472 -105 2168 107 0 7 chr2 24398092 24398383 -226289471 + AluSq SINE Alu 1 289 -24 1574 175 29 16 chr2 24398411 24398707 -226289147 + AluJb SINE Alu 1 303 -9 180 77 0 0 chr2 24398707 24398733 -226289121 + (TAAG)n Simple_repeat Simple_repeat 2 27 0 1574 175 29 16 chr2 24398733 24398744 -226289110 + AluJb SINE Alu 303 312 0 2415 81 0 0 chr2 24399048 24399356 -226288498 - AluSc SINE Alu -1 308 1 2546 65 0 0 chr2 24399367 24399677 -226288177 - AluY SINE Alu -1 310 1 265 282 99 30 chr2 24400522 24400653 -226287201 + L2 LINE L2 3172 3311 -2 678 256 143 74 chr2 24400855 24401065 -226286789 - L2 LINE L2 -1 3312 3118 4222 165 52 8 chr2 24401065 24401889 -226285965 + L1MA9 LINE L1 5449 6308 -4 678 256 143 74 chr2 24401889 24402183 -226285671 - L2 LINE L2 -195 3118 2771 2777 248 43 26 chr2 24402232 24403178 -226284676 - L1ME1 LINE L1 -9 6157 5194 1168 165 25 53 chr2 24403221 24403464 -226284390 - AluJo SINE Alu -76 236 1 997 178 160 17 chr2 24403472 24403823 -226284031 - L1MB8 LINE L1 -1 6177 5765 * 4006 236 34 20 chr2 24403816 24404937 -226282917 - L1MB8 LINE L1 -1294 4852 3716 363 191 217 35 chr2 24406506 24406621 -226281233 + L2 LINE L2 3175 3310 -3 189 0 0 0 chr2 24406748 24406769 -226281085 + (T)n Simple_repeat Simple_repeat 1 21 0 2369 90 0 0 chr2 24407643 24407944 -226279910 + AluSq SINE Alu 1 301 -12 293 359 14 75 chr2 24408152 24408500 -226279354 - L2 LINE L2 -98 3174 2848 221 370 37 22 chr2 24409238 24409373 -226278481 + L3 LINE CR1 1175 1311 -266 510 228 239 30 chr2 24409402 24409435 -226278419 - MIR SINE MIR -24 238 213 315 71 0 0 chr2 24409435 24409477 -226278377 + (TA)n Simple_repeat Simple_repeat 2 43 0 2335 65 0 7 chr2 24409477 24409770 -226278084 - AluY SINE Alu -20 291 1 510 228 239 30 chr2 24409770 24409932 -226277922 - MIR SINE MIR -48 214 1 403 253 112 28 chr2 24409971 24410149 -226277705 - L1ME3A LINE L1 -329 5841 5649 225 91 0 0 chr2 24411145 24411178 -226276676 + L1MC4a LINE L1 6361 6393 -1415 1420 292 92 39 chr2 24411659 24412324 -226275530 + HAL1 LINE L1 4 703 -1804 630 189 52 13 chr2 24412315 24412468 -226275386 + L1MC4a LINE L1 6336 6494 -1314 * 478 301 118 16 chr2 24412488 24412674 -226275180 + HAL1 LINE L1 728 932 -1575 379 178 20 20 chr2 24412698 24412799 -226275055 + (CATATA)n Simple_repeat Simple_repeat 3 103 0 851 269 97 11 chr2 24412825 24413186 -226274668 + HAL1 LINE L1 997 1388 -1119 539 283 128 54 chr2 24413163 24413730 -226274124 + L1ME3A LINE L1 5321 5937 -233 * 21 0 0 0 chr2 24414334 24414355 -226273499 + GC_rich Low_complexity Low_complexity 1 21 0 1574 170 0 18 chr2 24414355 24414632 -226273222 - AluJo SINE Alu -30 282 11 430 99 81 36 chr2 24414841 24414952 -226272902 + L1PA2 LINE L1 6034 6149 -6 716 147 18 43 chr2 24414952 24415107 -226272747 + L1MA5A LINE L1 6135 6293 -4 1641 209 86 87 chr2 24415107 24415862 -226271992 + L1M4 LINE L1 3830 4583 -1563 27 0 0 0 chr2 24416535 24416562 -226271292 + AT_rich Low_complexity Low_complexity 1 27 0 290 320 26 13 chr2 24417255 24417408 -226270446 - Charlie4 DNA MER1_type -1384 577 423 840 227 89 0 chr2 24417722 24417925 -226269929 + MER58A DNA MER1_type 4 224 0 2593 51 0 3 chr2 24418155 24418466 -226269388 - AluY SINE Alu -1 310 1 341 333 83 11 chr2 24418602 24418782 -226269072 + L2 LINE L2 2168 2360 -954 * 404 336 148 38 chr2 24418779 24419172 -226268682 + L2 LINE L2 2837 3272 0 2141 114 3 0 chr2 24419265 24419562 -226268292 + AluSx SINE Alu 1 298 -14 192 219 83 115 chr2 24419623 24419719 -226268135 - MIR SINE MIR -100 108 16 973 101 0 34 chr2 24419734 24419883 -226267971 + L1MC1 LINE L1 6016 6159 -174 359 162 27 0 chr2 24419992 24420066 -226267788 + L1MC1 LINE L1 6258 6333 0 248 91 23 0 chr2 24420083 24420127 -226267727 + (CAA)n Simple_repeat Simple_repeat 1 45 0 1812 152 34 7 chr2 24420332 24420628 -226267226 - AluJo SINE Alu -3 309 6 2402 92 3 0 chr2 24420830 24421136 -226266718 + AluSp SINE Alu 2 308 -5 2160 105 7 20 chr2 24421334 24421640 -226266214 + AluSq SINE Alu 1 302 -11 3560 205 43 47 chr2 24422120 24423175 -226264679 + L1ME1 LINE L1 40 1181 -5215 1170 184 101 14 chr2 24423189 24423467 -226264387 + L1ME1 LINE L1 4632 4933 -1282 986 201 43 39 chr2 24423498 24423777 -226264077 + L1ME1 LINE L1 5877 6156 -79 468 216 36 22 chr2 24423783 24423922 -226263932 + L1MB8 LINE L1 6036 6176 -2 1335 168 84 14 chr2 24423988 24424274 -226263580 - AluSx SINE Alu -6 306 1 5415 88 36 50 chr2 24424274 24425124 -226262730 - L1MA5A LINE L1 -170 6127 5288 195 42 0 0 chr2 24425124 24425148 -226262706 + (TTG)n Simple_repeat Simple_repeat 1 24 0 5415 88 36 50 chr2 24425148 24425183 -226262671 - L1MA5A LINE L1 -1009 5288 5254 1045 252 156 15 chr2 24425196 24425812 -226262042 - L1ME LINE L1 -2297 3783 3081 2267 101 0 3 chr2 24425885 24426182 -226261672 + AluSg SINE Alu 1 296 -14 498 75 0 0 chr2 24426183 24426250 -226261604 + (TA)n Simple_repeat Simple_repeat 2 68 0 1418 253 48 23 chr2 24426276 24426802 -226261052 - L1ME LINE L1 -3169 2911 2373 653 168 80 0 chr2 24426804 24426929 -226260925 + AluJo SINE Alu 1 135 -177 2021 259 82 69 chr2 24426931 24428286 -226259568 - L1ME LINE L1 -3699 2381 1044 414 100 0 0 chr2 24428286 24428346 -226259508 + (TG)n Simple_repeat Simple_repeat 2 61 0 2021 259 82 69 chr2 24428346 24428584 -226259270 - L1ME LINE L1 -5036 1044 810 225 65 0 0 chr2 24428584 24428615 -226259239 + (TA)n Simple_repeat Simple_repeat 2 32 0 2021 259 82 69 chr2 24428615 24428866 -226258988 - L1ME LINE L1 -5270 810 520 2316 204 79 18 chr2 24428866 24429424 -226258430 + L1MD2 LINE L1 5600 6191 -168 784 290 27 53 chr2 24429431 24429769 -226258085 - L1ME LINE L1 -5735 335 7 298 283 33 0 chr2 24430693 24430845 -226257009 + (TA)n Simple_repeat Simple_repeat 2 158 0 401 255 59 39 chr2 24431051 24431204 -226256650 - L1ME3A LINE L1 -6 6164 6009 2272 65 3 59 chr2 24431486 24431808 -226256046 + AluY SINE Alu 1 304 -7 886 152 236 0 chr2 24431880 24432071 -226255783 - MER46A DNA MER2_type 0 236 1 353 241 19 134 chr2 24432406 24432644 -226255210 - L1MC5 LINE L1 -11 8031 7783 618 197 28 84 chr2 24432885 24433063 -226254791 - L1MC4 LINE L1 -376 7666 7499 222 118 0 0 chr2 24433112 24433146 -226254708 + (T)n Simple_repeat Simple_repeat 1 34 0 667 233 51 81 chr2 24433718 24433954 -226253900 + MIR SINE MIR 27 255 -7 354 237 41 10 chr2 24434000 24434097 -226253757 + MIR SINE MIR 133 232 -30 207 200 0 0 chr2 24434355 24434400 -226253454 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2113 107 7 0 chr2 24434705 24434995 -226252859 - AluSg SINE Alu -18 292 1 557 255 7 28 chr2 24435507 24435652 -226252202 - FLAM_A SINE Alu 0 142 1 623 210 20 2 chr2 24436643 24436829 -226251025 + L1M4 LINE L1 809 1170 -5372 * 3411 182 14 77 chr2 24436825 24437221 -226250633 + L1MA9 LINE L1 5121 5540 -772 1347 143 35 9 chr2 24437221 24437451 -226250403 - MER46A DNA MER2_type 0 236 1 3411 182 14 77 chr2 24437451 24438117 -226249737 + L1MA9 LINE L1 5540 6274 -38 2625 165 20 16 chr2 24438129 24438639 -226249215 + L1MB7 LINE L1 5315 5826 -358 263 370 101 0 chr2 24439966 24440085 -226247769 - L2 LINE L2 -5 3267 3137 24 53 0 0 chr2 24440421 24440459 -226247395 + AT_rich Low_complexity Low_complexity 1 38 0 245 329 0 0 chr2 24440866 24440936 -226246918 - L2 LINE L2 -962 2352 2283 1129 302 82 20 chr2 24441022 24441600 -226246254 + L2 LINE L2 2687 3299 -14 591 334 58 37 chr2 24441964 24442231 -226245623 - L2 LINE L2 -529 2785 2508 2614 48 0 0 chr2 24442231 24442540 -226245314 + AluY SINE Alu 1 309 -2 591 334 58 37 chr2 24442540 24442598 -226245256 - L2 LINE L2 -806 2508 2453 250 314 105 9 chr2 24442620 24442725 -226245129 - MIR SINE MIR -125 137 23 4522 142 20 10 chr2 24442759 24443553 -226244301 - L1MA5 LINE L1 -2 6298 5497 791 338 7 83 chr2 24445243 24445702 -226242152 + L2 LINE L2 2845 3268 -4 1232 126 42 42 chr2 24446129 24446344 -226241510 - MER20 DNA MER1_type -4 215 1 21 0 0 0 chr2 24446692 24446713 -226241141 + AT_rich Low_complexity Low_complexity 1 21 0 303 305 92 71 chr2 24446951 24447190 -226240664 - L1MC4a LINE L1 -1898 5910 5667 2036 128 3 7 chr2 24447202 24447498 -226240356 + AluSq SINE Alu 1 295 -18 732 313 123 22 chr2 24447542 24448199 -226239655 - L1M3 LINE L1 -623 5560 4815 225 350 67 8 chr2 24448554 24448674 -226239180 + L2 LINE L2 3137 3263 -9 194 279 45 63 chr2 24448800 24448911 -226238943 - L2 LINE L2 -8 3305 3197 188 379 64 38 chr2 24448908 24448995 -226238859 + L2 LINE L2 2707 2790 -524 * 596 248 98 49 chr2 24448995 24449210 -226238644 - MIR SINE MIR -1 261 31 1762 175 0 29 chr2 24449210 24449519 -226238335 - AluJo SINE Alu -12 300 1 596 248 98 49 chr2 24449519 24449549 -226238305 - MIR SINE MIR -231 31 4 188 379 64 38 chr2 24449549 24449725 -226238129 + L2 LINE L2 2790 2977 -337 2355 92 3 0 chr2 24450853 24451157 -226236697 + AluSc SINE Alu 1 305 -4 2326 69 0 10 chr2 24452410 24452738 -226235116 - AluY SINE Alu 0 325 1 31 44 0 0 chr2 24452741 24452786 -226235068 + AT_rich Low_complexity Low_complexity 1 45 0 1609 99 9 0 chr2 24453063 24453274 -226234580 - AluSg/x SINE Alu -16 296 84 516 288 58 5 chr2 24453334 24453539 -226234315 + L1MEd LINE L1 587 802 -5317 319 256 12 0 chr2 24453554 24453640 -226234214 + HAL1 LINE L1 146 232 -2275 655 265 191 23 chr2 24453661 24454102 -226233752 + HAL1 LINE L1 586 1100 -1407 1161 241 90 40 chr2 24454131 24454530 -226233324 + L2 LINE L2 2895 3313 0 1800 243 189 41 chr2 24454543 24455607 -226232247 + HAL1 LINE L1 1125 2345 -162 628 280 84 29 chr2 24455673 24455912 -226231942 - MLT1J LTR MaLR -132 379 128 4211 167 33 36 chr2 24456060 24456280 -226231574 + L1MB8 LINE L1 5256 5475 -703 1842 167 7 3 chr2 24456280 24456580 -226231274 + AluJo SINE Alu 1 301 -11 4211 167 33 36 chr2 24456580 24457280 -226230574 + L1MB8 LINE L1 5475 6173 -5 453 328 104 16 chr2 24457379 24457687 -226230167 + L1ME3A LINE L1 5555 5889 -281 648 163 0 0 chr2 24457702 24457800 -226230054 + MER2 DNA MER2_type 1 98 -247 715 220 0 8 chr2 24457800 24457932 -226229922 + FLAM_A SINE Alu 1 131 -2 987 147 82 52 chr2 24457953 24457997 -226229857 + MER2 DNA MER2_type 83 124 -221 2039 131 0 10 chr2 24457997 24458288 -226229566 - AluSx SINE Alu -24 288 1 987 147 82 52 chr2 24458288 24458474 -226229380 + MER2 DNA MER2_type 124 320 -25 1716 188 0 7 chr2 24458823 24459121 -226228733 - AluJo SINE Alu -16 296 1 291 337 10 10 chr2 24459551 24459649 -226228205 + MIR SINE MIR 53 150 -112 22 80 0 0 chr2 24459974 24460024 -226227830 + AT_rich Low_complexity Low_complexity 1 50 0 291 54 0 0 chr2 24460540 24460577 -226227277 + (TG)n Simple_repeat Simple_repeat 2 38 0 2392 61 0 3 chr2 24460635 24460930 -226226924 - AluY SINE Alu -17 294 1 21 0 0 0 chr2 24460938 24460959 -226226895 + AT_rich Low_complexity Low_complexity 1 21 0 262 250 0 0 chr2 24461028 24461080 -226226774 - L2 LINE L2 0 3313 3262 203 321 119 0 chr2 24461082 24461166 -226226688 + MIR SINE MIR 156 249 -13 231 165 114 25 chr2 24461652 24461731 -226226123 - LTR67 LTR ERVL -15 542 457 2111 117 0 0 chr2 24462029 24462347 -226225507 + AluSx SINE Alu 3 320 0 211 310 10 40 chr2 24462363 24462463 -226225391 + L2 LINE L2 2217 2313 -1001 755 131 0 0 chr2 24462733 24462840 -226225014 + U6 snRNA snRNA 1 107 0 2656 186 55 10 chr2 24462843 24463441 -226224413 + L1PA13 LINE L1 1552 2176 -4611 245 125 25 0 chr2 24463441 24463481 -226224373 - MSTA LTR MaLR 0 428 388 2323 103 0 0 chr2 24463486 24463798 -226224056 + AluSx SINE Alu 1 312 0 2359 92 19 0 chr2 24463898 24464451 -226223403 - L1P4 LINE L1 -594 5580 5019 22 35 0 0 chr2 24465044 24465073 -226222781 + AT_rich Low_complexity Low_complexity 1 29 0 329 244 51 32 chr2 24465313 24465469 -226222385 - Charlie7 DNA MER1_type -229 2383 2225 1578 100 0 21 chr2 24465473 24465712 -226222142 - L1M2 LINE L1 -521 5770 5537 1576 189 97 120 chr2 24465742 24465756 -226222098 - Charlie7 DNA MER1_type -378 2234 2221 3044 121 43 15 chr2 24465756 24466294 -226221560 + L1MA8 LINE L1 5735 6287 -4 1576 189 97 120 chr2 24466294 24466517 -226221337 - Charlie7 DNA MER1_type -391 2221 1994 1776 136 4 0 chr2 24466517 24466767 -226221087 + AluSx SINE Alu 1 251 -61 1576 189 97 120 chr2 24466767 24467145 -226220709 - Charlie7 DNA MER1_type -618 1994 1637 2405 63 0 26 chr2 24467145 24467448 -226220406 - AluY SINE Alu -16 295 1 1576 189 97 120 chr2 24467448 24467623 -226220231 - Charlie7 DNA MER1_type -975 1637 1460 547 249 173 14 chr2 24467643 24467920 -226219934 - Charlie7 DNA MER1_type -2291 321 1 21 107 0 0 chr2 24468614 24468698 -226219156 + AT_rich Low_complexity Low_complexity 1 84 0 450 354 44 11 chr2 24468981 24469162 -226218692 + MER91A DNA MER1_type 9 195 -1 335 211 61 79 chr2 24471000 24471114 -226216740 + MIR SINE MIR 11 122 -140 2232 114 0 3 chr2 24471430 24471737 -226216117 - AluSq SINE Alu -7 306 1 6058 100 41 2 chr2 24472793 24472901 -226214953 - L1PA13 LINE L1 0 6163 6061 1866 118 55 71 chr2 24472901 24473282 -226214572 - THE1C LTR MaLR 0 375 1 6058 100 41 2 chr2 24473282 24474838 -226213016 - L1PA13 LINE L1 -102 6061 4469 1808 88 95 29 chr2 24474849 24475122 -226212732 - AluY SINE Alu -19 292 2 2251 118 3 0 chr2 24475805 24476111 -226211743 + AluSg SINE Alu 1 307 -3 196 74 0 0 chr2 24477423 24477450 -226210404 - L3 LINE CR1 -174 1403 1377 2225 65 27 7 chr2 24478292 24478586 -226209268 - AluY SINE Alu -11 300 1 224 232 0 0 chr2 24479071 24479127 -226208727 + (TA)n Simple_repeat Simple_repeat 2 57 0 24 53 0 0 chr2 24479161 24479199 -226208655 + AT_rich Low_complexity Low_complexity 1 38 0 195 323 189 14 chr2 24479313 24479530 -226208324 - L2 LINE L2 -215 3098 2844 42 0 0 0 chr2 24480234 24480276 -226207578 + AT_rich Low_complexity Low_complexity 1 42 0 979 276 29 20 chr2 24482011 24482359 -226205495 + L1ME LINE L1 5414 5764 -406 24 53 0 0 chr2 24482462 24482500 -226205354 + AT_rich Low_complexity Low_complexity 1 38 0 222 37 0 0 chr2 24483613 24483640 -226204214 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 380 395 52 32 chr2 24483641 24483889 -226203965 - L2 LINE L2 -14 3258 3006 327 259 72 70 chr2 24484567 24484681 -226203173 - MER5B DNA MER1_type -60 129 2 206 283 71 61 chr2 24485387 24485461 -226202393 + MER5A DNA MER1_type 90 162 -27 2160 90 7 0 chr2 24485461 24485740 -226202114 + AluSp SINE Alu 1 281 -32 393 22 0 0 chr2 24485742 24485788 -226202066 + (TAA)n Simple_repeat Simple_repeat 1 46 0 206 283 71 61 chr2 24485788 24485809 -226202045 + MER5A DNA MER1_type 162 189 0 257 237 155 10 chr2 24486342 24486439 -226201415 + MER5A DNA MER1_type 3 113 -76 247 267 0 23 chr2 24486533 24486619 -226201235 - MER103 DNA DNA -44 122 39 1788 166 13 20 chr2 24486821 24487122 -226200732 + AluJb SINE Alu 1 299 -13 2014 132 7 0 chr2 24487327 24487623 -226200231 + AluSx SINE Alu 1 298 -14 194 0 39 0 chr2 24488192 24488218 -226199636 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 269 173 0 0 chr2 24489906 24489958 -226197896 + L1MB7 LINE L1 6133 6184 0 2258 105 14 0 chr2 24490092 24490388 -226197466 + AluSx SINE Alu 1 300 -12 183 42 0 0 chr2 24491145 24491169 -226196685 + (TTTTTA)n Simple_repeat Simple_repeat 2 25 0 26 50 0 0 chr2 24491873 24491913 -226195941 + AT_rich Low_complexity Low_complexity 1 40 0 192 326 101 59 chr2 24494361 24494701 -226193153 + L2 LINE L2 2824 3190 -82 754 231 177 9 chr2 24494772 24495314 -226192540 - L1ME LINE L1 -443 5719 5088 * 862 213 7 0 chr2 24495299 24495501 -226192353 + L1ME3 LINE L1 5666 5870 -300 2226 94 7 3 chr2 24495659 24495990 -226191864 - AluSx SINE Alu 0 332 1 369 281 68 14 chr2 24497082 24497228 -226190626 - MER103 DNA DNA -12 154 1 393 294 106 38 chr2 24497681 24497841 -226190013 + MIR3 SINE MIR 10 180 -28 667 263 136 77 chr2 24497978 24498546 -226189308 + HAL1 LINE L1 643 1176 -1331 2181 104 3 7 chr2 24498546 24498835 -226189019 + AluSq SINE Alu 1 288 -25 189 0 0 0 chr2 24498835 24498856 -226188998 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 667 263 136 77 chr2 24498856 24499130 -226188724 + HAL1 LINE L1 1175 1536 -971 2633 301 84 35 chr2 24499149 24500986 -226186868 + L1ME2 LINE L1 36 1962 -4434 2673 234 52 40 chr2 24501086 24501459 -226186395 + L1M4 LINE L1 4229 4596 -1550 2605 46 0 7 chr2 24501459 24501763 -226186091 + AluY SINE Alu 1 302 -9 2673 234 52 40 chr2 24501763 24502347 -226185507 + L1M4 LINE L1 4596 5198 -948 472 228 36 36 chr2 24502338 24502505 -226185349 + L1ME2 LINE L1 3547 3713 -2502 * 2638 145 123 29 chr2 24502496 24503411 -226184443 + L1MC2 LINE L1 5228 6237 -107 1808 213 9 58 chr2 24503392 24503504 -226184350 + L1ME2 LINE L1 5358 5474 -761 * 1862 146 27 10 chr2 24503504 24503798 -226184056 - AluSx SINE Alu -13 299 1 1808 213 9 58 chr2 24503798 24504150 -226183704 + L1ME2 LINE L1 5474 5799 -436 1406 109 43 137 chr2 24504152 24504481 -226183373 + AluYb8 SINE Alu 5 302 -16 1214 127 0 0 chr2 24504481 24504654 -226183200 + AluSg/x SINE Alu 135 307 -3 1225 196 117 50 chr2 24504658 24505060 -226182794 + L1ME2 LINE L1 5796 6224 -9 1447 259 125 35 chr2 24505074 24505944 -226181910 + HAL1 LINE L1 1554 2502 -5 955 126 13 13 chr2 24506585 24506744 -226181110 - THE1B-int LTR MaLR -1421 159 1 2116 136 48 23 chr2 24506746 24507099 -226180755 - THE1B LTR MaLR -2 362 1 2133 101 49 0 chr2 24507277 24507563 -226180291 + AluSx SINE Alu 1 300 -12 858 209 57 8 chr2 24507729 24507973 -226179881 - L1MEc LINE L1 -805 6136 5881 847 208 50 6 chr2 24507983 24508142 -226179712 + MER58A DNA MER1_type 2 167 0 4359 212 65 55 chr2 24508171 24508764 -226179090 - L1MEc LINE L1 -1066 5875 5290 329 0 24 0 chr2 24508764 24508805 -226179049 + (TA)n Simple_repeat Simple_repeat 2 43 0 2301 104 3 0 chr2 24508805 24509114 -226178740 - AluY SINE Alu -1 310 1 4359 212 65 55 chr2 24509114 24509671 -226178183 - L1MEc LINE L1 -1651 5290 4701 2238 98 7 0 chr2 24509671 24509966 -226177888 - AluSx SINE Alu -14 298 2 4359 212 65 55 chr2 24509966 24510381 -226177473 - L1MEc LINE L1 -2240 4701 4292 1008 254 115 5 chr2 24510385 24510786 -226177068 - L1MEc LINE L1 -2730 4211 3767 205 70 0 70 chr2 24510790 24510833 -226177021 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 447 122 11 44 chr2 24510833 24510923 -226176931 - LTR9 LTR ERV1 -86 526 440 2715 170 33 2 chr2 24510923 24511382 -226176472 - HUERS-P3 LTR ERV1 -8432 487 15 1093 96 5 70 chr2 24511397 24511584 -226176270 - LTR9 LTR ERV1 0 612 438 2078 242 79 17 chr2 24511587 24512444 -226175410 - L1MEc LINE L1 -3172 3769 2896 3669 89 32 2 chr2 24512452 24512978 -226174876 - L1PA10 LINE L1 -11 6157 5616 2312 94 12 0 chr2 24512978 24513298 -226174556 + L1PA10 LINE L1 5289 5612 -556 1112 249 74 115 chr2 24513301 24513401 -226174453 - L1MEc LINE L1 -4221 2901 2798 973 130 0 158 chr2 24513401 24513655 -226174199 - MER20 DNA MER1_type -4 215 2 1112 249 74 115 chr2 24513655 24514696 -226173158 - L1MEc LINE L1 -4324 2798 1807 2415 167 37 9 chr2 24514723 24514754 -226173100 - LTR45B LTR ERV1 -11 520 491 2875 53 3 3 chr2 24514754 24515109 -226172745 - THE1A LTR MaLR 0 355 1 2415 167 37 9 chr2 24515109 24515543 -226172311 - LTR45B LTR ERV1 -40 491 5 2760 239 40 94 chr2 24515665 24516955 -226170899 - L1MEc LINE L1 -5186 1237 17 207 333 95 0 chr2 24517014 24517098 -226170756 + L2 LINE L2 2966 3057 -215 566 261 162 25 chr2 24517432 24517796 -226170058 + L1MC4a LINE L1 5752 6165 -1643 1262 162 63 0 chr2 24518679 24518901 -226168953 + MER46A DNA MER2_type 1 236 0 344 326 105 22 chr2 24518975 24519156 -226168698 - L2 LINE L2 -1942 1372 1177 307 282 38 46 chr2 24520201 24520332 -226167522 - L1MEd LINE L1 -5018 1101 972 256 292 135 15 chr2 24520332 24520592 -226167262 - HAL1 LINE L1 -1389 1118 828 385 325 132 16 chr2 24521543 24521786 -226166068 - MARNA DNA Mariner -167 419 149 1339 135 9 22 chr2 24521975 24522197 -226165657 + AluJb SINE Alu 86 304 -8 1015 258 175 35 chr2 24522362 24522963 -226164891 - L1MC4a LINE L1 -1870 5938 5254 314 23 0 23 chr2 24523256 24523300 -226164554 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2021 139 72 12 chr2 24524440 24524801 -226163053 - MLT1B LTR MaLR -10 644 1 366 23 0 0 chr2 24524895 24524938 -226162916 + (TG)n Simple_repeat Simple_repeat 1 43 0 26 50 0 0 chr2 24524947 24524987 -226162867 + AT_rich Low_complexity Low_complexity 1 40 0 277 211 19 39 chr2 24525044 24525148 -226162706 - L1ME LINE L1 -325 5796 5695 2416 84 0 3 chr2 24526041 24526349 -226161505 + AluSq SINE Alu 1 307 -6 489 234 57 110 chr2 24528024 24528251 -226159603 - MER112 DNA MER1_type -42 218 4 2095 107 3 30 chr2 24529030 24529330 -226158524 - AluSc SINE Alu -17 292 1 318 287 197 47 chr2 24529744 24529930 -226157924 + HAL1 LINE L1 2176 2333 -174 2182 106 0 39 chr2 24529930 24530242 -226157612 + AluSx SINE Alu 1 300 -12 318 287 197 47 chr2 24530242 24530334 -226157520 + HAL1 LINE L1 2333 2496 -11 589 284 38 19 chr2 24530449 24530660 -226157194 + MIR SINE MIR 48 262 0 600 256 46 26 chr2 24531767 24531962 -226155892 - MLT1L LTR MaLR 0 615 417 192 158 0 0 chr2 24532093 24532131 -226155723 + A-rich Low_complexity Low_complexity 1 38 0 243 229 282 58 chr2 24532149 24532337 -226155517 - MLT1L LTR MaLR -380 235 6 2014 134 0 0 chr2 24532645 24532952 -226154902 + AluSx SINE Alu 1 307 0 2383 79 26 0 chr2 24533271 24533575 -226154279 + AluSq SINE Alu 1 312 -1 480 246 185 82 chr2 24533691 24533881 -226153973 + L1M4 LINE L1 4549 4718 -1428 1627 178 10 40 chr2 24533881 24534184 -226153670 + AluJo SINE Alu 1 294 -18 480 246 185 82 chr2 24534184 24534648 -226153206 + L1M4 LINE L1 4718 5270 -876 22 0 0 0 chr2 24534891 24534913 -226152941 + AT_rich Low_complexity Low_complexity 1 22 0 2316 101 3 0 chr2 24535308 24535605 -226152249 + AluSp SINE Alu 1 298 -15 222 354 71 24 chr2 24535766 24535893 -226151961 + L3 LINE CR1 16 148 -1429 268 359 94 52 chr2 24535893 24536039 -226151815 + L3 LINE CR1 1309 1466 -111 1117 178 23 5 chr2 24536039 24536253 -226151601 - MER20 DNA MER1_type 0 219 2 268 359 94 52 chr2 24536253 24536298 -226151556 + L3 LINE CR1 1466 1508 -69 202 284 98 114 chr2 24536917 24537276 -226150578 + L2 LINE L2 2915 3267 -5 23 101 0 0 chr2 24537638 24537717 -226150137 + AT_rich Low_complexity Low_complexity 1 79 0 495 215 16 8 chr2 24537981 24538102 -226149752 - MER103 DNA DNA -29 137 16 320 24 49 0 chr2 24538500 24538574 -226149280 - AluY SINE Alu 0 315 240 1739 146 53 19 chr2 24539625 24539948 -226147906 - MER7A DNA MER2_type 0 346 15 388 152 76 0 chr2 24540528 24540620 -226147234 - L1ME4a LINE L1 -2 6119 6021 294 293 197 14 chr2 24541652 24541799 -226146055 + MIR3 SINE MIR 9 182 -26 1614 141 0 23 chr2 24541825 24542088 -226145766 - AluSx SINE Alu -11 301 45 305 288 50 105 chr2 24542279 24542498 -226145356 - HAL1 LINE L1 -2296 211 5 518 116 74 11 chr2 24543806 24543901 -226143953 + L1MB5 LINE L1 5828 5928 -246 650 296 13 43 chr2 24544763 24544996 -226142858 + L2 LINE L2 987 1212 -2102 3167 242 130 33 chr2 24545001 24546433 -226141421 + L2 LINE L2 1746 3313 0 287 186 279 0 chr2 24546892 24546978 -226140876 - MER103 DNA DNA -53 113 4 2019 106 3 69 chr2 24547499 24547819 -226140035 + AluSp SINE Alu 1 299 -14 319 331 110 12 chr2 24548683 24548846 -226139008 - MER5A DNA MER1_type -4 185 7 314 284 95 0 chr2 24548944 24549039 -226138815 - L2 LINE L2 0 3272 3169 195 42 0 0 chr2 24549141 24549165 -226138689 + (TA)n Simple_repeat Simple_repeat 2 25 0 27 0 0 0 chr2 24549371 24549398 -226138456 + AT_rich Low_complexity Low_complexity 1 27 0 1977 178 0 0 chr2 24549873 24550177 -226137677 - AluJb SINE Alu -8 304 1 2105 126 0 26 chr2 24550247 24550557 -226137297 + AluSg SINE Alu 1 302 -8 4022 234 109 72 chr2 24551353 24551679 -226136175 - L1MEc LINE L1 -4399 1997 1685 2231 92 0 55 chr2 24551679 24552004 -226135850 - AluY SINE Alu -4 307 1 4022 234 109 72 chr2 24552004 24552388 -226135466 - L1MEc LINE L1 -4711 1685 1317 2307 121 0 0 chr2 24552388 24552695 -226135159 - AluSx SINE Alu -5 307 1 4022 234 109 72 chr2 24552695 24553875 -226133979 - L1MEc LINE L1 -5079 1317 35 836 181 93 10 chr2 24553903 24554108 -226133746 - L1ME3A LINE L1 -3 6167 5946 447 302 102 8 chr2 24554385 24554620 -226133234 + MIR SINE MIR 4 260 -2 1455 94 0 5 chr2 24554805 24554997 -226132857 + AluY SINE Alu 1 191 -120 2343 88 3 3 chr2 24555175 24555480 -226132374 - AluSq SINE Alu -8 305 1 697 263 40 9 chr2 24555606 24555830 -226132024 - MIR SINE MIR -12 250 20 188 319 99 11 chr2 24555970 24556061 -226131793 - L2 LINE L2 -211 3061 2963 1953 134 18 0 chr2 24556470 24556747 -226131107 + AluSx SINE Alu 13 294 -18 2311 69 24 10 chr2 24556780 24557071 -226130783 + AluY SINE Alu 1 295 -16 1982 141 3 10 chr2 24557455 24557753 -226130101 - AluSx SINE Alu -11 301 6 320 291 23 40 chr2 24558093 24558268 -226129586 + GA-rich Low_complexity Low_complexity 5 176 0 225 0 0 0 chr2 24560075 24560100 -226127754 + (A)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr2 24560771 24560796 -226127058 + AT_rich Low_complexity Low_complexity 1 25 0 2797 110 60 13 chr2 24562608 24563072 -226124782 - LTR19A LTR ERV1 0 486 1 185 286 16 0 chr2 24563766 24563829 -226124025 - L2 LINE L2 -56 3257 3194 2301 101 7 13 chr2 24564412 24564719 -226123135 + AluSq SINE Alu 1 305 -8 2394 93 0 0 chr2 24564719 24565019 -226122835 + AluSc SINE Alu 1 300 -9 1591 135 82 32 chr2 24565870 24566151 -226121703 - AluJo SINE Alu -17 295 1 198 226 42 48 chr2 24566353 24566447 -226121407 - MIR SINE MIR -65 143 98 2194 110 7 7 chr2 24566545 24566845 -226121009 + AluSx SINE Alu 3 302 -10 643 163 0 0 chr2 24566952 24567050 -226120804 + AluS SINE Alu 2 99 -214 2485 68 0 13 chr2 24567812 24568122 -226119732 + AluY SINE Alu 1 306 -5 1478 211 31 92 chr2 24568514 24568999 -226118855 - LTR9 LTR ERV1 0 612 227 2574 61 0 10 chr2 24568999 24569309 -226118545 - AluY SINE Alu -4 307 1 1478 211 31 92 chr2 24569309 24569523 -226118331 - LTR9 LTR ERV1 -385 227 1 212 0 36 0 chr2 24569525 24569553 -226118301 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1145 177 72 153 chr2 24569850 24570198 -226117656 - MER4C LTR ERV1 0 465 169 1940 145 54 3 chr2 24570198 24570494 -226117360 - AluSx SINE Alu -1 311 1 1145 177 72 153 chr2 24570494 24570648 -226117206 - MER4C LTR ERV1 -296 169 4 2118 105 0 45 chr2 24571039 24571352 -226116502 + AluSx SINE Alu 1 299 -13 2292 80 7 0 chr2 24571782 24572069 -226115785 + AluSg SINE Alu 1 289 -21 1336 260 58 7 chr2 24572139 24572908 -226114946 - L2 LINE L2 -5 3308 2455 635 149 98 11 chr2 24572911 24573085 -226114769 + AluSx SINE Alu 2 190 -122 2484 84 3 0 chr2 24573319 24573630 -226114224 - AluSp SINE Alu -1 312 1 684 332 82 12 chr2 24573711 24574115 -226113739 + L1M4 LINE L1 3798 4229 -1917 2248 98 10 3 chr2 24574928 24575223 -226112631 + AluSc SINE Alu 1 297 -12 2215 129 0 0 chr2 24575854 24576156 -226111698 + AluSx SINE Alu 2 303 -9 718 125 10 0 chr2 24576344 24576448 -226111406 + AluSq SINE Alu 1 105 -208 1863 151 112 19 chr2 24576448 24576860 -226110994 + LTR7 LTR ERV1 1 450 0 1459 117 0 9 chr2 24576860 24577073 -226110781 + AluSq SINE Alu 101 311 -2 505 182 36 9 chr2 24577357 24577467 -226110387 - MER5A DNA MER1_type -76 113 1 2066 107 0 35 chr2 24577690 24577839 -226110015 - AluSg SINE Alu -31 279 143 2411 55 24 3 chr2 24577839 24578128 -226109726 - AluSp SINE Alu -17 296 2 2066 107 0 35 chr2 24578128 24578267 -226109587 - AluSg SINE Alu -167 143 1 472 268 14 21 chr2 24578552 24578694 -226109160 - MIR SINE MIR -115 147 7 1801 107 53 17 chr2 24578751 24579050 -226108804 - L1PA12 LINE L1 0 6168 5859 2383 74 10 0 chr2 24579459 24579755 -226108099 - AluSq SINE Alu -14 299 1 956 128 0 0 chr2 24580047 24580180 -226107674 - AluSq/x SINE Alu -180 133 1 2288 87 0 7 chr2 24580654 24580952 -226106902 + AluSx SINE Alu 1 296 -16 805 208 7 7 chr2 24581285 24581439 -226106415 - FRAM SINE Alu -30 146 1 352 198 58 12 chr2 24581465 24581551 -226106303 + HsTC2 DNA Tc2 1808 1897 -1 2299 112 0 3 chr2 24582383 24582686 -226105168 - AluSx SINE Alu -10 302 1 428 258 225 0 chr2 24583103 24583312 -226104542 + MIR SINE MIR 2 257 -5 298 240 392 9 chr2 24583762 24583979 -226103875 - L1ME4a LINE L1 -2 6119 5820 322 294 38 31 chr2 24583988 24584148 -226103706 - L1ME4a LINE L1 -420 5701 5541 408 215 47 9 chr2 24585792 24585899 -226101955 + MIR SINE MIR 48 158 -104 385 278 46 0 chr2 24587237 24587345 -226100509 + L2 LINE L2 3197 3309 -4 2323 104 0 0 chr2 24587534 24587823 -226100031 + AluSg SINE Alu 1 289 -21 261 250 36 64 chr2 24587835 24587975 -226099879 - L2 LINE L2 -26 3287 3152 970 86 0 43 chr2 24587991 24588130 -226099724 + FLAM_C SINE Alu 1 133 0 899 261 82 117 chr2 24588457 24589406 -226098448 - L2 LINE L2 -557 2757 1801 1009 163 163 0 chr2 24589406 24589609 -226098245 + MER46A DNA MER2_type 1 236 0 899 261 82 117 chr2 24589609 24589679 -226098175 - L2 LINE L2 -1513 1801 1730 216 216 0 0 chr2 24589716 24589767 -226098087 + (TG)n Simple_repeat Simple_repeat 2 52 0 2405 63 21 0 chr2 24589935 24590222 -226097632 - AluY SINE Alu -18 293 1 2227 84 16 53 chr2 24590438 24590760 -226097094 - AluSx SINE Alu -2 310 1 2044 111 24 0 chr2 24591466 24591754 -226096100 + AluSx SINE Alu 1 295 -17 44698 41 2 0 chr2 24591786 24597933 -226089921 - L1PA4 LINE L1 0 6155 1 622 205 73 13 chr2 24598041 24598192 -226089662 - L1ME LINE L1 -517 5653 5494 229 254 30 15 chr2 24598573 24598640 -226089214 + CT-rich Low_complexity Low_complexity 3 70 0 2107 238 66 43 chr2 24598679 24599663 -226088191 - L1ME3 LINE L1 -102 6296 5289 2138 92 54 3 chr2 24599668 24599963 -226087891 - AluSx SINE Alu -2 310 1 1873 261 54 42 chr2 24599988 24601359 -226086495 - L1ME3 LINE L1 -2168 4214 2835 1133 140 0 0 chr2 24601360 24601524 -226086330 + AluSg/x SINE Alu 134 297 -15 371 215 134 132 chr2 24601526 24601759 -226086095 - L1ME3 LINE L1 -3542 2840 2609 814 169 0 22 chr2 24601759 24601895 -226085959 + FLAM_C SINE Alu 1 133 0 371 215 134 132 chr2 24601895 24601966 -226085888 - L1ME3 LINE L1 -3773 2609 2540 2308 92 0 0 chr2 24601966 24602269 -226085585 - AluSq SINE Alu -10 303 1 371 215 134 132 chr2 24602269 24602394 -226085460 - L1ME3 LINE L1 -3842 2540 2417 2097 128 0 3 chr2 24602394 24602706 -226085148 - AluSx SINE Alu -1 311 1 371 215 134 132 chr2 24602706 24602744 -226085110 - L1ME3 LINE L1 -3965 2417 2420 2256 73 3 23 chr2 24602744 24602911 -226084943 - AluSg SINE Alu -13 297 137 2505 64 0 0 chr2 24602911 24603222 -226084632 - AluY SINE Alu 0 311 1 2256 73 3 23 chr2 24603222 24603356 -226084498 - AluSg SINE Alu -173 137 2 371 215 134 132 chr2 24603356 24603433 -226084421 - L1ME3 LINE L1 -3961 2421 2346 409 297 100 46 chr2 24603448 24603930 -226083924 - L1ME3 LINE L1 -4576 1987 1480 571 292 95 58 chr2 24603931 24604381 -226083473 - L1ME3 LINE L1 -4958 1424 850 2218 102 10 0 chr2 24604425 24604730 -226083124 + AluSq SINE Alu 1 308 -5 251 233 0 0 chr2 24605359 24605419 -226082435 - L1ME3 LINE L1 -5974 398 339 258 56 0 0 chr2 24606078 24606114 -226081740 + (CA)n Simple_repeat Simple_repeat 1 36 0 1873 148 11 0 chr2 24606434 24606718 -226081136 + AluJo SINE Alu 15 301 -11 223 244 61 49 chr2 24606830 24606912 -226080942 - L2 LINE L2 -4 3268 3186 185 324 27 63 chr2 24607500 24607611 -226080243 - L2 LINE L2 -5 3308 3202 21 0 0 0 chr2 24609836 24609857 -226077997 + AT_rich Low_complexity Low_complexity 1 21 0 520 219 166 0 chr2 24614954 24615105 -226072749 - FAM SINE Alu -9 40 1 2085 118 0 10 chr2 24615152 24615456 -226072398 - AluSx SINE Alu -11 301 1 2369 63 3 3 chr2 24616068 24616367 -226071487 + AluSq SINE Alu 1 299 -14 21 36 0 0 chr2 24616793 24616821 -226071033 + GC_rich Low_complexity Low_complexity 1 28 0 1679 129 0 4 chr2 24616822 24617063 -226070791 - AluJb SINE Alu -38 274 35 1005 218 114 108 chr2 24617984 24618580 -226069274 - L1ME3A LINE L1 -315 5855 5260 350 329 72 13 chr2 24618580 24618732 -226069122 - MIR3 SINE MIR -2 206 46 321 326 155 11 chr2 24619798 24619985 -226067869 - MIR SINE MIR -48 214 1 236 352 56 66 chr2 24620008 24620204 -226067650 - L3 LINE CR1 -69 1508 1315 2269 107 0 0 chr2 24620468 24620777 -226067077 - AluSx SINE Alu -3 309 1 2467 45 7 7 chr2 24620873 24621181 -226066673 - AluY SINE Alu -2 309 2 489 270 56 60 chr2 24621418 24621505 -226066349 + MIR SINE MIR 20 106 -156 2283 78 7 0 chr2 24621505 24621799 -226066055 - AluSg SINE Alu -14 296 1 489 270 56 60 chr2 24621799 24621926 -226065928 + MIR SINE MIR 106 233 -29 245 200 0 104 chr2 24623276 24623401 -226064453 + G-rich Low_complexity Low_complexity 3 114 0 210 125 0 54 chr2 24623412 24623468 -226064386 + (CGGGGG)n Simple_repeat Simple_repeat 3 55 0 211 179 0 95 chr2 24623477 24623561 -226064293 + G-rich Low_complexity Low_complexity 2 77 0 1359 304 114 28 chr2 24624097 24625189 -226062665 + L2 LINE L2 2134 3313 0 265 202 64 55 chr2 24625235 24625344 -226062510 - MIR SINE MIR -60 148 39 2221 97 7 0 chr2 24627112 24627410 -226060444 + AluSx SINE Alu 1 300 -12 181 341 88 0 chr2 24627428 24627519 -226060335 + MIR3 SINE MIR 58 156 -52 190 283 18 62 chr2 24628168 24628281 -226059573 - MIR SINE MIR -58 150 43 983 242 127 25 chr2 24628524 24628917 -226058937 - L2 LINE L2 -696 2618 2186 591 66 0 0 chr2 24629354 24629430 -226058424 - MER30 DNA MER1_type -154 76 1 253 0 54 0 chr2 24629859 24629896 -226057958 + (GGGTG)n Simple_repeat Simple_repeat 3 41 0 197 77 0 0 chr2 24630222 24630248 -226057606 + MIR SINE MIR 63 88 -120 2198 93 3 0 chr2 24630400 24630689 -226057165 - AluSx SINE Alu -11 301 12 389 267 7 44 chr2 24631767 24631902 -226055952 - L2 LINE L2 0 3272 3143 258 306 90 0 chr2 24633409 24633520 -226054334 + MIR3 SINE MIR 37 157 -51 1031 211 24 10 chr2 24634651 24634695 -226053159 + MER58A DNA MER1_type 4 46 -2374 1459 179 0 0 chr2 24634695 24634935 -226052919 - AluJb SINE Alu -17 295 56 1031 211 24 10 chr2 24634935 24635098 -226052756 + MER58A DNA MER1_type 46 214 -10 1082 83 7 0 chr2 24636274 24636418 -226051436 + THE1A LTR MaLR 1 145 -210 558 297 100 39 chr2 24636637 24636967 -226050887 + L2 LINE L2 2941 3290 -23 355 259 36 1 chr2 24637142 24637262 -226050592 + MIR SINE MIR 34 154 -54 1003 151 6 6 chr2 24638049 24638215 -226049639 - AluJo SINE Alu -146 166 1 423 339 46 6 chr2 24638950 24639124 -226048730 + MIR3 SINE MIR 25 205 -3 30 0 0 0 chr2 24639292 24639322 -226048532 + AT_rich Low_complexity Low_complexity 1 30 0 1818 119 3 85 chr2 24639329 24639675 -226048179 + AluSq SINE Alu 1 320 0 198 0 0 0 chr2 24639674 24639696 -226048158 + (TG)n Simple_repeat Simple_repeat 1 22 0 1438 202 32 7 chr2 24639781 24640063 -226047791 - AluJb SINE Alu -21 291 3 1557 163 9 71 chr2 24640187 24640513 -226047341 + AluJo SINE Alu 5 310 -2 367 220 110 46 chr2 24641246 24641355 -226046499 + MER63 DNA MER1_type 4 745 -317 2371 115 0 0 chr2 24641658 24641970 -226045884 + AluSq SINE Alu 1 312 -1 576 0 0 0 chr2 24641970 24642034 -226045820 + (TA)n Simple_repeat Simple_repeat 2 65 0 222 170 0 21 chr2 24642403 24642450 -226045404 - L2 LINE L2 -4 3309 3264 2202 88 7 3 chr2 24642515 24642810 -226045044 + AluSx SINE Alu 1 296 -16 398 275 81 19 chr2 24642900 24643060 -226044794 - MIR SINE MIR -8 254 85 1302 241 72 41 chr2 24643075 24643511 -226044343 + MLT1C LTR MaLR 14 457 -10 245 299 89 59 chr2 24643585 24643856 -226043998 + L2 LINE L2 2804 3082 -190 186 43 0 0 chr2 24643943 24643966 -226043888 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 367 341 7 0 chr2 24644258 24644396 -226043458 + MLT1L LTR MaLR 470 608 -7 2206 64 41 7 chr2 24644492 24644787 -226043067 + AluY SINE Alu 1 305 -6 2030 122 7 3 chr2 24646753 24647056 -226040798 - AluSx SINE Alu 0 312 9 2116 112 7 0 chr2 24647172 24647467 -226040387 - AluSx SINE Alu -13 299 3 1989 131 0 3 chr2 24647560 24647851 -226040003 + AluSx SINE Alu 1 290 -22 277 196 0 0 chr2 24648698 24648749 -226039105 + L2 LINE L2 3262 3312 -1 521 329 38 35 chr2 24649380 24649693 -226038161 - LTR16C LTR ERVL -18 473 160 310 322 6 17 chr2 24650408 24650588 -226037266 + (TG)n Simple_repeat Simple_repeat 1 178 0 220 267 6 6 chr2 24650603 24650779 -226037075 + (TG)n Simple_repeat Simple_repeat 1 176 0 180 238 0 0 chr2 24650850 24650934 -226036920 + (TG)n Simple_repeat Simple_repeat 1 84 0 407 297 0 6 chr2 24650954 24651119 -226036735 + (TG)n Simple_repeat Simple_repeat 1 164 0 437 316 0 0 chr2 24651134 24651311 -226036543 + (TG)n Simple_repeat Simple_repeat 1 177 0 281 333 0 6 chr2 24651325 24651510 -226036344 + (TG)n Simple_repeat Simple_repeat 1 183 0 208 323 31 31 chr2 24652003 24652130 -226035724 - MIR SINE MIR -99 163 37 875 210 6 2 chr2 24652631 24652830 -226035024 - MLT1D LTR MaLR -327 178 2 2161 110 31 3 chr2 24653032 24653323 -226034531 - AluSx SINE Alu -13 299 1 528 298 44 0 chr2 24653635 24653816 -226034038 - MIR SINE MIR -64 198 10 2467 84 0 0 chr2 24654167 24654477 -226033377 + AluY SINE Alu 1 310 -1 2284 102 0 46 chr2 24655213 24655536 -226032318 + AluSx SINE Alu 1 308 -4 491 317 65 5 chr2 24656132 24656318 -226031536 - L3 LINE CR1 -137 1440 1244 2115 140 0 0 chr2 24656457 24656764 -226031090 - AluSx SINE Alu -3 309 3 197 262 48 29 chr2 24656846 24656949 -226030905 - L3 LINE CR1 -703 874 770 206 192 77 0 chr2 24657079 24657131 -226030723 - MIR SINE MIR -63 145 90 2162 107 6 50 chr2 24657748 24658066 -226029788 + AluSx SINE Alu 1 304 -8 558 0 0 0 chr2 24658466 24658528 -226029326 + (CA)n Simple_repeat Simple_repeat 2 63 0 1550 190 136 15 chr2 24659459 24659870 -226027984 - LOR1b LTR ERV1 0 461 1 267 306 73 16 chr2 24659988 24660112 -226027742 + MIR SINE MIR 47 177 -85 378 308 71 25 chr2 24660719 24660959 -226026895 - L1ME LINE L1 -299 5822 5572 250 103 0 0 chr2 24662846 24662885 -226024969 - MIR SINE MIR -19 243 205 203 253 23 58 chr2 24662922 24662961 -226024893 - MIR SINE MIR -133 129 90 3770 86 0 4 chr2 24662961 24663474 -226024380 - MER9 LTR ERVK 0 511 1 203 253 23 58 chr2 24663474 24663521 -226024333 - MIR SINE MIR -172 90 46 2550 89 14 0 chr2 24664128 24664478 -226023376 - THE1A LTR MaLR 0 355 1 11140 87 13 9 chr2 24664478 24664653 -226023201 - THE1A-int LTR MaLR 0 1580 1407 2263 132 0 0 chr2 24664653 24664964 -226022890 + AluSq SINE Alu 1 311 -2 11140 87 13 9 chr2 24664964 24666362 -226021492 - THE1A-int LTR MaLR -173 1407 1 988 26 0 0 chr2 24666362 24666479 -226021375 - THE1A LTR MaLR 0 355 239 846 157 124 6 chr2 24668192 24668370 -226019484 + MER3 DNA MER1_type 1 199 -10 299 189 0 27 chr2 24668409 24668483 -226019371 + MER117 DNA MER1_type 28 99 -98 239 200 20 0 chr2 24668703 24668753 -226019101 + L2 LINE L2 3184 3234 -38 1238 129 54 42 chr2 24668766 24669006 -226018848 - AluJo SINE Alu -6 306 64 398 289 94 13 chr2 24669058 24669207 -226018647 - Charlie8 DNA MER1_type -2241 176 16 2311 108 3 0 chr2 24671743 24672048 -226015806 + AluSx SINE Alu 1 306 -6 252 287 74 0 chr2 24672684 24672792 -226015062 - MIR SINE MIR -66 196 81 2608 44 0 31 chr2 24673038 24673359 -226014495 + AluY SINE Alu 1 311 0 452 139 70 0 chr2 24673373 24673459 -226014395 + L1MB5 LINE L1 6022 6113 -61 3117 73 20 7 chr2 24673882 24674320 -226013534 + MLT2A1 LTR ERVL 1 444 0 729 160 0 16 chr2 24674331 24674456 -226013398 - FLAM_C SINE Alu -15 128 6 3040 172 56 2 chr2 24674729 24674778 -226013076 + L1MB4 LINE L1 5524 5569 -611 2294 88 10 10 chr2 24674778 24675085 -226012769 + AluSx SINE Alu 1 307 -5 3040 172 56 2 chr2 24675085 24675647 -226012207 + L1MB4 LINE L1 5569 6168 -12 567 258 68 84 chr2 24675670 24675954 -226011900 + L1MC4a LINE L1 5600 5880 -1928 2052 121 11 0 chr2 24675954 24676226 -226011628 + AluSx SINE Alu 21 295 -17 567 258 68 84 chr2 24676226 24676251 -226011603 + L1MC4a LINE L1 5880 5904 -1904 414 0 0 0 chr2 24676261 24676307 -226011547 + (TG)n Simple_repeat Simple_repeat 1 46 0 363 226 47 74 chr2 24676478 24676668 -226011186 + L1ME LINE L1 82 266 -5853 1517 156 53 23 chr2 24677103 24677366 -226010488 + AluJo SINE Alu 42 312 0 624 287 91 33 chr2 24677418 24678074 -226009780 + L1ME LINE L1 792 1475 -4654 809 174 131 24 chr2 24678093 24678380 -226009474 + MSTD LTR MaLR 5 396 0 296 298 153 32 chr2 24678382 24678728 -226009126 + L1ME LINE L1 1533 1920 -4390 1365 263 113 57 chr2 24678802 24679163 -226008691 + L1ME LINE L1 2657 2996 -3133 1532 131 151 4 chr2 24679163 24679422 -226008432 + AluSg SINE Alu 1 297 -13 1365 263 113 57 chr2 24679422 24679506 -226008348 + L1ME LINE L1 2996 3074 -3055 2350 75 0 26 chr2 24679506 24679811 -226008043 + AluY SINE Alu 1 297 -14 1365 263 113 57 chr2 24679811 24680168 -226007686 + L1ME LINE L1 3074 3529 -2600 2118 143 7 0 chr2 24680168 24680475 -226007379 - AluJo SINE Alu -3 309 1 1365 263 113 57 chr2 24680475 24680666 -226007188 + L1ME LINE L1 3529 3708 -2421 2390 93 0 31 chr2 24680800 24681123 -226006731 + AluSq SINE Alu 1 313 0 275 215 101 0 chr2 24681137 24681216 -226006638 - MIR SINE MIR -67 141 55 274 278 62 10 chr2 24681604 24681701 -226006153 - MIR SINE MIR -70 192 91 199 336 136 0 chr2 24685422 24685562 -226002292 - MIR3 SINE MIR -7 201 43 1733 186 11 0 chr2 24686779 24687058 -226000796 - AluJo SINE Alu -30 282 1 190 270 124 0 chr2 24689689 24689778 -225998076 + L2 LINE L2 3179 3278 -35 2201 63 80 14 chr2 24689957 24690243 -225997611 + AluY SINE Alu 1 305 -6 208 365 112 18 chr2 24690370 24690540 -225997314 - MIR SINE MIR -55 207 22 2390 91 3 0 chr2 24691500 24691796 -225996058 + AluSx SINE Alu 1 297 -15 289 336 0 24 chr2 24692139 24692264 -225995590 - L2 LINE L2 -258 3055 2934 188 233 0 0 chr2 24692378 24692421 -225995433 + L2 LINE L2 3201 3243 -29 961 184 18 18 chr2 24692528 24692746 -225995108 + MER20 DNA MER1_type 2 219 0 2177 113 0 10 chr2 24693541 24693833 -225994021 + AluSx SINE Alu 1 289 -23 2388 93 0 0 chr2 24693834 24694134 -225993720 + AluSg SINE Alu 1 300 -10 187 276 233 9 chr2 24694950 24695066 -225992788 + MER5A DNA MER1_type 20 161 -28 2521 75 0 3 chr2 24695238 24695543 -225992311 - AluSx SINE Alu -8 304 1 290 336 188 0 chr2 24695971 24696120 -225991734 + MER5B DNA MER1_type 1 177 -1 196 354 164 22 chr2 24696365 24696732 -225991122 + L2 LINE L2 2554 2972 -342 303 292 125 8 chr2 24696867 24696987 -225990867 + L2 LINE L2 3139 3272 0 2202 133 25 5 chr2 24697776 24698144 -225989710 - THE1C LTR MaLR 0 375 1 241 321 148 46 chr2 24698438 24698675 -225989179 + MIR SINE MIR 2 262 0 2391 223 79 37 chr2 24699431 24699492 -225988362 - MER45B DNA AcHobo -306 734 677 2277 116 0 0 chr2 24699492 24699785 -225988069 + AluSx SINE Alu 1 293 -19 2391 223 79 37 chr2 24699785 24700316 -225987538 - MER45B DNA AcHobo -363 677 112 2218 91 3 14 chr2 24700316 24700625 -225987229 + AluSq SINE Alu 1 306 0 2391 223 79 37 chr2 24700625 24700648 -225987206 - MER45B DNA AcHobo -928 112 91 2657 251 69 10 chr2 24700693 24701566 -225986288 - L1MEc LINE L1 -2091 4124 3201 2165 102 17 3 chr2 24701639 24701934 -225985920 - AluSx SINE Alu -13 299 1 3300 185 40 3 chr2 24701957 24702579 -225985275 + Tigger7 DNA MER2_type 1 645 -88 1194 126 31 0 chr2 24702575 24702766 -225985088 + Tigger7 DNA MER2_type 2291 2487 0 * 867 219 90 47 chr2 24702766 24703019 -225984835 - L1MEc LINE L1 -3121 3094 2819 2462 57 3 14 chr2 24703019 24703316 -225984538 - AluY SINE Alu -17 294 1 867 219 90 47 chr2 24703316 24703427 -225984427 - L1MEc LINE L1 -3396 2819 2714 720 188 21 0 chr2 24703439 24703583 -225984271 - L1MEc LINE L1 -3675 2540 2394 207 0 0 0 chr2 24703585 24703608 -225984246 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 913 118 0 0 chr2 24703610 24703729 -225984125 - AluSq/x SINE Alu -194 119 1 230 254 0 0 chr2 24703733 24703796 -225984058 - L1MEc LINE L1 -3824 2391 2329 1163 166 0 21 chr2 24703797 24703990 -225983864 - AluJo SINE Alu -10 302 114 952 141 0 0 chr2 24703992 24704127 -225983727 + AluSg/x SINE Alu 137 271 -39 645 228 0 0 chr2 24704157 24704280 -225983574 - AluJo SINE Alu -187 125 3 2472 251 54 52 chr2 24704281 24704368 -225983486 - L1MEc LINE L1 -4020 2376 2291 1937 143 17 14 chr2 24704368 24704661 -225983193 - AluJb SINE Alu -10 302 9 2472 251 54 52 chr2 24704661 24704967 -225982887 - L1MEc LINE L1 -4105 2291 1987 1608 190 29 26 chr2 24704967 24705278 -225982576 + AluJo SINE Alu 1 312 0 2472 251 54 52 chr2 24705278 24705855 -225981999 - L1MEc LINE L1 -4409 1987 1399 2329 97 7 0 chr2 24705855 24706153 -225981701 - AluSg SINE Alu -10 300 1 2472 251 54 52 chr2 24706153 24706377 -225981477 - L1MEc LINE L1 -4997 1399 1177 1406 176 4 0 chr2 24706379 24706606 -225981248 - AluJb SINE Alu 0 312 85 756 232 31 80 chr2 24706611 24706868 -225980986 - L1MEc LINE L1 -5226 1170 943 2257 113 0 3 chr2 24706868 24707161 -225980693 + AluSg SINE Alu 1 292 -18 756 232 31 80 chr2 24707161 24707351 -225980503 - L1MEc LINE L1 -5453 943 745 693 308 94 38 chr2 24707367 24707847 -225980007 - L1MEc LINE L1 -5868 528 22 426 204 0 0 chr2 24707985 24708078 -225979776 + CT-rich Low_complexity Low_complexity 2 94 0 221 277 0 0 chr2 24708298 24708345 -225979509 + L2 LINE L2 3210 3256 -16 198 341 47 35 chr2 24708674 24708844 -225979010 + L2 LINE L2 2682 2853 -461 484 271 52 57 chr2 24710982 24711183 -225976671 + L3 LINE CR1 1127 1328 -249 2381 95 0 0 chr2 24711183 24711478 -225976376 + AluSq SINE Alu 11 305 -8 484 271 52 57 chr2 24711478 24711505 -225976349 + L3 LINE CR1 1328 1354 -223 791 192 0 0 chr2 24712058 24712188 -225975666 + FLAM_A SINE Alu 4 133 0 369 0 0 0 chr2 24712426 24712467 -225975387 + (TG)n Simple_repeat Simple_repeat 2 42 0 2084 143 0 0 chr2 24712595 24712889 -225974965 - AluJo SINE Alu -18 294 1 445 302 0 0 chr2 24712889 24713018 -225974836 - L1ME2 LINE L1 -47 6117 5989 1023 95 53 53 chr2 24713065 24713254 -225974600 + Tigger2a DNA MER2_type 2 190 -244 1694 135 0 4 chr2 24713256 24713500 -225974354 + AluJb SINE Alu 1 243 -69 1306 108 0 6 chr2 24713501 24713677 -225974177 + AluSq SINE Alu 129 303 -10 377 147 29 0 chr2 24713677 24713745 -225974109 + Tigger2a DNA MER2_type 365 434 0 289 205 128 0 chr2 24713811 24713889 -225973965 - L1ME1 LINE L1 -20 6146 6059 413 253 47 33 chr2 24713963 24714113 -225973741 + MIR SINE MIR 61 212 -50 413 148 12 0 chr2 24714641 24714722 -225973132 + GA-rich Low_complexity Low_complexity 1 82 0 1904 139 33 0 chr2 24714756 24715053 -225972801 + AluSx SINE Alu 1 306 0 2166 125 17 0 chr2 24715154 24715449 -225972405 - AluSx SINE Alu -12 300 1 2381 98 0 3 chr2 24715637 24715942 -225971912 - AluY SINE Alu -7 304 1 491 229 29 0 chr2 24716281 24716386 -225971468 - MIR SINE MIR -91 171 64 2126 100 7 0 chr2 24716552 24716831 -225971023 + AluSx SINE Alu 20 300 -12 2114 119 44 0 chr2 24717357 24717651 -225970203 + AluSq SINE Alu 1 307 -6 2237 126 3 0 chr2 24718221 24718531 -225969323 + AluSx SINE Alu 1 311 -1 2404 105 0 3 chr2 24718548 24718854 -225969000 + AluSp SINE Alu 1 305 -8 373 284 26 110 chr2 24719402 24719666 -225968188 + L2 LINE L2 2101 2342 -972 352 106 40 60 chr2 24720461 24720536 -225967318 + MLT1G LTR MaLR 241 324 -271 312 198 128 0 chr2 24720621 24720707 -225967147 + MLT1G1 LTR MaLR 396 492 -63 1196 164 43 5 chr2 24720710 24720918 -225966936 - AluJb SINE Alu -10 302 87 351 212 0 0 chr2 24720921 24720987 -225966867 + MLT1G1 LTR MaLR 530 595 0 2016 112 51 7 chr2 24721160 24721454 -225966400 - AluSc SINE Alu -2 307 1 1480 166 36 62 chr2 24721724 24721876 -225965978 - AluJo SINE Alu -4 308 154 2108 106 41 10 chr2 24721876 24722168 -225965686 + AluSx SINE Alu 3 303 -9 1480 166 36 62 chr2 24722168 24722214 -225965640 - AluJo SINE Alu -158 154 108 189 107 0 0 chr2 24722214 24722242 -225965612 + (TG)n Simple_repeat Simple_repeat 1 28 0 1480 166 36 62 chr2 24722242 24722349 -225965505 - AluJo SINE Alu -204 108 10 525 267 8 15 chr2 24722383 24722514 -225965340 + MIR SINE MIR 22 151 -111 870 158 7 27 chr2 24722691 24722837 -225965017 + FLAM_C SINE Alu 1 143 0 540 81 0 0 chr2 24723061 24723135 -225964719 + (TG)n Simple_repeat Simple_repeat 1 74 0 263 231 0 0 chr2 24724066 24724118 -225963736 + MIR SINE MIR 103 154 -108 301 228 27 87 chr2 24724791 24724909 -225962945 + MIR3 SINE MIR 24 133 -75 2207 113 0 7 chr2 24724909 24725202 -225962652 + AluSq SINE Alu 10 300 -13 301 228 27 87 chr2 24725202 24725232 -225962622 + MIR3 SINE MIR 133 163 -45 2297 108 7 0 chr2 24726045 24726350 -225961504 - AluSx SINE Alu -5 307 1 2406 86 0 0 chr2 24726913 24727204 -225960650 + AluSc SINE Alu 3 293 -16 426 288 69 6 chr2 24727406 24727566 -225960288 + MIR3 SINE MIR 24 193 -15 217 211 83 110 chr2 24728319 24728428 -225959426 - MIR SINE MIR -44 218 113 23 54 0 0 chr2 24730284 24730321 -225957533 + GC_rich Low_complexity Low_complexity 1 37 0 24 67 0 0 chr2 24730492 24730537 -225957317 + GC_rich Low_complexity Low_complexity 1 45 0 23 101 0 0 chr2 24730709 24730788 -225957066 + GC_rich Low_complexity Low_complexity 1 79 0 954 122 0 27 chr2 24730902 24731049 -225956805 + AluJb SINE Alu 170 312 0 2493 85 0 0 chr2 24731062 24731368 -225956486 + AluSc SINE Alu 1 306 -3 832 110 0 0 chr2 24731534 24731643 -225956211 + AluSp/q SINE Alu 189 297 -16 239 0 0 31 chr2 24731643 24731675 -225956179 + (TA)n Simple_repeat Simple_repeat 1 31 0 504 269 69 7 chr2 24731768 24731826 -225956028 + MIR SINE MIR 1 54 -208 1735 162 7 4 chr2 24731826 24732097 -225955757 - AluJb SINE Alu -39 273 2 504 269 69 7 chr2 24732097 24732183 -225955671 + MIR SINE MIR 54 154 -108 2346 95 3 0 chr2 24732275 24732571 -225955283 - AluSc SINE Alu -12 297 1 2365 97 6 3 chr2 24733204 24733515 -225954339 - AluSq SINE Alu -1 312 1 2017 147 0 16 chr2 24733989 24734303 -225953551 - AluSx SINE Alu -3 309 1 648 192 8 8 chr2 24734539 24734664 -225953190 + L2 LINE L2 3189 3313 0 2214 92 0 3 chr2 24734675 24734959 -225952895 - AluSg SINE Alu -27 283 1 2258 95 0 13 chr2 24735679 24735983 -225951871 + AluSg SINE Alu 9 308 -2 186 43 0 0 chr2 24736901 24736924 -225950930 + (T)n Simple_repeat Simple_repeat 1 23 0 832 196 0 0 chr2 24739224 24739357 -225948497 - FLAM_A SINE Alu 0 133 1 259 231 0 0 chr2 24740571 24740623 -225947231 + L2 LINE L2 3221 3272 0 580 249 50 20 chr2 24742445 24742646 -225945208 + L1M4 LINE L1 4572 4778 -1368 2311 119 0 3 chr2 24743114 24743426 -225944428 + AluSx SINE Alu 1 311 -1 428 306 45 0 chr2 24743498 24743651 -225944203 + MIR3 SINE MIR 47 208 0 28 61 0 0 chr2 24744244 24744293 -225943561 + AT_rich Low_complexity Low_complexity 1 49 0 1961 132 3 20 chr2 24744377 24744673 -225943181 + AluJb SINE Alu 1 291 -21 960 271 82 66 chr2 24744689 24745471 -225942383 - L1ME4a LINE L1 -14 6107 5313 837 147 23 0 chr2 24745471 24745600 -225942254 - FLAM_A SINE Alu -1 132 1 960 271 82 66 chr2 24745600 24745619 -225942235 - L1ME4a LINE L1 -808 5313 5296 355 353 186 11 chr2 24746416 24746776 -225941078 + L1MEc LINE L1 474 896 -5929 2467 67 3 0 chr2 24747206 24747503 -225940351 + AluY SINE Alu 1 298 -13 1430 276 81 40 chr2 24747517 24748349 -225939505 + L1MEc LINE L1 1014 2011 -4814 389 228 83 62 chr2 24749225 24749370 -225938484 - MER5A DNA MER1_type -6 183 36 231 263 0 0 chr2 24749407 24749464 -225938390 + CT-rich Low_complexity Low_complexity 2 58 0 1145 184 61 5 chr2 24751030 24751242 -225936612 + MIR SINE MIR 2 225 -37 348 318 136 34 chr2 24751670 24752111 -225935743 + L2 LINE L2 1934 2419 -895 239 263 141 0 chr2 24753829 24753928 -225933926 - L1ME4a LINE L1 -43 6078 5966 2267 68 10 7 chr2 24753988 24754284 -225933570 + AluY SINE Alu 1 297 -14 324 178 78 101 chr2 24754405 24754534 -225933320 + MLT1K LTR MaLR 460 585 -3 589 291 118 0 chr2 24755604 24755807 -225932047 + MIR SINE MIR 35 261 -1 1675 124 10 58 chr2 24755986 24756277 -225931577 + AluJb SINE Alu 1 277 -35 372 214 71 20 chr2 24756362 24756460 -225931394 - MIR SINE MIR -43 219 117 455 241 73 29 chr2 24756819 24756956 -225930898 - MIR SINE MIR -89 173 31 776 205 54 11 chr2 24757066 24757251 -225930603 + L1MD2 LINE L1 6165 6357 -2 1270 154 66 4 chr2 24757264 24757537 -225930317 + AluSx SINE Alu 4 293 -19 13037 116 31 14 chr2 24757793 24759821 -225928033 + Tigger1 DNA MER2_type 89 2151 -267 1221 181 14 113 chr2 24759823 24759919 -225927935 + L1M4 LINE L1 2790 2894 -3252 203 79 26 0 chr2 24759919 24759957 -225927897 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1221 181 14 113 chr2 24759957 24759974 -225927880 + L1M4 LINE L1 2894 2911 -3235 1961 113 18 0 chr2 24759974 24760257 -225927597 - AluSx SINE Alu -24 288 1 1221 181 14 113 chr2 24760257 24760567 -225927287 + L1M4 LINE L1 2911 3172 -2974 1832 125 0 48 chr2 24761289 24761600 -225926254 - AluSp SINE Alu -17 296 1 339 293 134 21 chr2 24762157 24762396 -225925458 + L1ME LINE L1 5366 5631 -490 1253 73 12 0 chr2 24762484 24762649 -225925205 - LTR13 LTR ERVK 0 1007 841 * 1557 54 64 0 chr2 24762641 24762844 -225925010 - LTR13 LTR ERVK -791 216 1 241 286 59 8 chr2 24762988 24763107 -225924747 + L1ME LINE L1 5773 5897 -224 1728 161 14 0 chr2 24763119 24763411 -225924443 + AluJo SINE Alu 1 296 -16 2127 109 6 10 chr2 24763633 24763945 -225923909 + AluSx SINE Alu 1 311 -1 259 294 198 8 chr2 24764023 24764149 -225923705 - MIR SINE MIR -93 169 20 24 32 0 0 chr2 24764636 24764667 -225923187 + GC_rich Low_complexity Low_complexity 1 31 0 209 227 34 23 chr2 24764808 24764896 -225922958 + C-rich Low_complexity Low_complexity 3 91 0 29 0 0 0 chr2 24765003 24765032 -225922822 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 24766776 24766797 -225921057 + AT_rich Low_complexity Low_complexity 1 21 0 2235 87 0 3 chr2 24768167 24768465 -225919389 + AluSq SINE Alu 1 297 -16 2181 98 3 0 chr2 24768771 24769068 -225918786 + AluSx SINE Alu 1 298 -14 2491 27 7 0 chr2 24769174 24769469 -225918385 - AluY SINE Alu -14 297 1 2082 106 11 0 chr2 24769951 24770235 -225917619 - AluSx SINE Alu -25 287 1 317 288 144 19 chr2 24770566 24770726 -225917128 - L2 LINE L2 -11 3302 3123 299 73 0 24 chr2 24770743 24770784 -225917070 + MLT1K LTR MaLR 547 586 -2 2023 125 7 0 chr2 24771140 24771436 -225916418 - AluSg SINE Alu -12 298 1 293 268 21 52 chr2 24771624 24771721 -225916133 + L2 LINE L2 3218 3311 -2 2195 93 3 6 chr2 24772098 24772409 -225915445 + AluSx SINE Alu 1 310 -2 2215 68 0 4 chr2 24772629 24772938 -225914916 - AluSc SINE Alu 0 308 1 1881 136 14 0 chr2 24772942 24773229 -225914625 - AluSx SINE Alu -21 291 1 23 0 0 0 chr2 24773327 24773350 -225914504 + AT_rich Low_complexity Low_complexity 1 23 0 236 324 93 19 chr2 24773984 24774092 -225913762 + MIR SINE MIR 25 140 -122 1208 108 48 0 chr2 24774358 24774544 -225913310 - AluY SINE Alu -116 195 1 725 117 9 0 chr2 24774552 24774663 -225913191 - FLAM_C SINE Alu 0 143 32 331 187 133 0 chr2 24774664 24774739 -225913115 - L1MA9 LINE L1 -69 6243 6159 1305 156 12 56 chr2 24774772 24775022 -225912832 + L1MA9 LINE L1 5712 5950 -362 1983 108 3 26 chr2 24775022 24775327 -225912527 + AluSq SINE Alu 1 298 -15 386 288 100 59 chr2 24775608 24775778 -225912076 + MIR3 SINE MIR 13 189 -19 341 268 29 87 chr2 24776074 24776150 -225911704 - L1ME4a LINE L1 -1 6120 6054 2011 114 0 39 chr2 24776150 24776457 -225911397 - AluSx SINE Alu -17 295 1 341 268 29 87 chr2 24776457 24776518 -225911336 - L1ME4a LINE L1 -67 6054 5991 1806 143 14 0 chr2 24776827 24777114 -225910740 + AluSx SINE Alu 1 291 -21 642 121 32 8 chr2 24777125 24777249 -225910605 + GA-rich Low_complexity Low_complexity 2 128 0 1577 147 33 23 chr2 24777261 24777568 -225910286 + AluJb SINE Alu 1 310 -2 627 133 10 0 chr2 24778169 24778267 -225909587 + AluJb SINE Alu 200 298 -14 320 253 0 74 chr2 24778543 24778638 -225909216 + L1ME4a LINE L1 6033 6120 -1 243 0 0 0 chr2 24778685 24778712 -225909142 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 927 85 23 0 chr2 24778712 24778841 -225909013 - AluSc SINE Alu -177 132 1 276 262 60 27 chr2 24778900 24779049 -225908805 - L1M4 LINE L1 -1218 4928 4775 27 0 0 0 chr2 24779066 24779093 -225908761 + AT_rich Low_complexity Low_complexity 1 27 0 291 167 36 83 chr2 24779593 24779677 -225908177 - U14 snRNA snRNA -7 80 1 2039 99 20 7 chr2 24779684 24779978 -225907876 - AluSx SINE Alu -14 298 1 469 283 94 50 chr2 24780014 24780618 -225907236 - L1M4 LINE L1 -1430 4716 4086 1953 108 34 7 chr2 24780660 24780956 -225906898 - AluSx SINE Alu -8 304 1 323 211 0 0 chr2 24781079 24781136 -225906718 - L2 LINE L2 -7 3265 3209 298 261 68 11 chr2 24781179 24781267 -225906587 + MIR SINE MIR 18 110 -98 2311 54 0 57 chr2 24783418 24783734 -225904120 - AluY SINE Alu -13 298 1 382 311 42 42 chr2 24783740 24783907 -225903947 - L1ME4a LINE L1 -298 5823 5657 2200 93 0 13 chr2 24784156 24784469 -225903385 - AluSg1 SINE Alu 0 309 1 2272 92 0 0 chr2 24784526 24784821 -225903033 - AluSc SINE Alu -14 295 1 2260 97 6 0 chr2 24785762 24786073 -225901781 + AluSp SINE Alu 1 313 0 22 0 0 0 chr2 24786235 24786257 -225901597 + AT_rich Low_complexity Low_complexity 1 22 0 2121 124 10 0 chr2 24786258 24786564 -225901290 + AluSx SINE Alu 1 309 -3 196 354 56 45 chr2 24787081 24787259 -225900595 + L2 LINE L2 2541 2720 -594 304 309 39 67 chr2 24787261 24787340 -225900514 + HAL1 LINE L1 10 90 -2417 2428 53 3 3 chr2 24787340 24787640 -225900214 + AluY SINE Alu 1 300 -11 304 309 39 67 chr2 24787640 24787738 -225900116 + HAL1 LINE L1 90 182 -2325 600 236 200 5 chr2 24787739 24787959 -225899895 + HAL1 LINE L1 1697 1959 -548 685 124 152 0 chr2 24787961 24788066 -225899788 + AluJ SINE Alu 3 123 -189 1768 118 4 8 chr2 24788067 24788360 -225899494 - AluSx SINE Alu 0 315 24 767 108 0 0 chr2 24788360 24788471 -225899383 + Tigger5 DNA MER2_type 2069 2179 -144 1133 146 0 11 chr2 24788480 24788665 -225899189 + AluJ SINE Alu 108 290 -22 346 259 127 19 chr2 24788668 24788826 -225899028 + HAL1 LINE L1 1947 2121 -386 216 0 0 0 chr2 24789061 24789085 -225898769 + (T)n Simple_repeat Simple_repeat 1 24 0 1349 136 5 5 chr2 24789213 24789433 -225898421 + AluSq SINE Alu 70 289 -24 207 0 0 0 chr2 24789436 24789459 -225898395 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 259 111 0 0 chr2 24789459 24789495 -225898359 - AluSx SINE Alu -262 37 2 215 276 171 0 chr2 24789505 24789581 -225898273 + L2 LINE L2 3225 3313 0 190 139 23 70 chr2 24789692 24789724 -225898130 - L2 LINE L2 -19 3294 3263 2234 87 0 10 chr2 24789724 24790033 -225897821 - AluSg SINE Alu -4 306 1 697 266 79 0 chr2 24790080 24790283 -225897571 - MIR SINE MIR -43 219 1 2137 71 0 18 chr2 24790853 24791134 -225896720 + AluSc SINE Alu 1 276 -33 187 27 27 54 chr2 24791134 24791171 -225896683 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 217 308 45 58 chr2 24791336 24791492 -225896362 + MIR SINE MIR 51 204 -58 1799 125 53 4 chr2 24791557 24791838 -225896016 - AluSx SINE Alu -17 295 1 207 278 37 0 chr2 24792333 24792387 -225895467 - MIR SINE MIR -77 131 76 438 273 18 0 chr2 24794139 24794249 -225893605 + MIR3 SINE MIR 74 185 -23 221 274 0 0 chr2 24794348 24794399 -225893455 + MIR SINE MIR 100 150 -112 201 208 21 21 chr2 24794587 24794635 -225893219 - MIR SINE MIR -147 115 68 2228 84 7 10 chr2 24794730 24795029 -225892825 + AluSp SINE Alu 1 298 -15 4377 159 17 77 chr2 24795036 24795265 -225892589 + L1MB3 LINE L1 5135 5376 -807 1964 156 0 0 chr2 24795265 24795572 -225892282 + 7SLRNA srpRNA srpRNA 5 311 -9 4377 159 17 77 chr2 24795572 24795707 -225892147 + L1MB3 LINE L1 5376 5517 -666 1981 121 0 0 chr2 24795707 24795989 -225891865 + AluSx SINE Alu 1 282 -30 4377 159 17 77 chr2 24795989 24796345 -225891509 + L1MB3 LINE L1 5517 5776 -407 1628 126 108 0 chr2 24796345 24796614 -225891240 - AluSx SINE Alu -14 298 1 4377 159 17 77 chr2 24796614 24796941 -225890913 + L1MB3 LINE L1 5776 6121 -62 1352 79 11 5 chr2 24796943 24797132 -225890722 + AluSp SINE Alu 120 309 -4 2214 81 3 17 chr2 24797142 24797440 -225890414 + AluSg SINE Alu 1 294 -16 22 56 0 0 chr2 24797458 24797494 -225890360 + AT_rich Low_complexity Low_complexity 1 36 0 2278 80 0 3 chr2 24797869 24798181 -225889673 + AluY SINE Alu 1 311 0 1846 116 46 0 chr2 24798358 24798643 -225889211 - AluSx SINE Alu -14 298 1 2257 85 0 7 chr2 24798720 24799026 -225888828 - AluSx SINE Alu -8 304 1 354 226 49 0 chr2 24799102 24799204 -225888650 + L1ME4a LINE L1 5977 6083 -38 23 0 0 0 chr2 24799309 24799332 -225888522 + AT_rich Low_complexity Low_complexity 1 23 0 715 183 109 30 chr2 24799476 24799678 -225888176 + L1ME2 LINE L1 5938 6155 -9 2139 78 3 50 chr2 24800149 24800470 -225887384 - AluSx SINE Alu -6 306 1 752 257 88 9 chr2 24800705 24800931 -225886923 + MIR SINE MIR 13 256 -6 1631 164 0 33 chr2 24802417 24802721 -225885133 - AluJo SINE Alu -18 294 1 209 356 45 23 chr2 24803618 24803795 -225884059 + L2 LINE L2 2830 3010 -262 943 172 92 6 chr2 24804260 24804434 -225883420 + MER3 DNA MER1_type 21 209 0 283 303 34 46 chr2 24804603 24804651 -225883203 - L1MC4a LINE L1 -1884 5924 5877 1864 89 7 4 chr2 24804651 24804920 -225882934 - AluY SINE Alu 0 311 42 283 303 34 46 chr2 24804920 24805046 -225882808 - L1MC4a LINE L1 -1931 5877 5752 843 99 7 84 chr2 24805066 24805208 -225882646 - FLAM_C SINE Alu -2 131 1 2350 81 0 0 chr2 24805846 24806156 -225881698 - AluY SINE Alu 0 311 2 2103 69 94 0 chr2 24806159 24806436 -225881418 - AluSx SINE Alu -9 303 1 2365 147 21 95 chr2 24806628 24806932 -225880922 - MER66B LTR ERV1 0 486 236 2202 82 0 3 chr2 24806932 24807225 -225880629 - AluY SINE Alu -19 292 1 2365 147 21 95 chr2 24807225 24807445 -225880409 - MER66B LTR ERV1 -250 236 1 2104 113 0 3 chr2 24807487 24807787 -225880067 - AluSx SINE Alu -9 303 5 2334 57 0 0 chr2 24808184 24808488 -225879366 - AluY SINE Alu 0 304 1 2265 94 0 0 chr2 24808488 24808787 -225879067 - AluSg SINE Alu -11 299 1 1912 162 0 3 chr2 24809500 24809808 -225878046 - AluJb SINE Alu -4 308 2 423 276 71 34 chr2 24810108 24810347 -225877507 + L1ME4a LINE L1 5595 5842 -279 182 274 263 11 chr2 24810446 24810541 -225877313 - MIR SINE MIR -71 137 19 1867 132 35 0 chr2 24810588 24810875 -225876979 - AluJb SINE Alu -15 297 1 232 338 100 38 chr2 24810986 24811326 -225876528 + L2 LINE L2 2934 3294 -19 2083 100 11 0 chr2 24811511 24811792 -225876062 + AluSx SINE Alu 1 284 -28 2137 117 0 0 chr2 24812234 24812543 -225875311 - AluSq SINE Alu -4 309 1 1558 176 30 0 chr2 24813026 24813322 -225874532 + AluJb SINE Alu 3 307 -5 496 253 28 45 chr2 24813485 24813663 -225874191 - L1MC4 LINE L1 -4 8038 7864 1407 119 0 0 chr2 24813710 24813904 -225873950 + AluSq SINE Alu 11 204 -109 303 238 36 12 chr2 24813905 24813989 -225873865 + L1MC4 LINE L1 6624 6709 -1333 930 138 0 0 chr2 24813997 24814127 -225873727 - FLAM_C SINE Alu -3 130 1 373 228 79 9 chr2 24814131 24814245 -225873609 - L1MC4 LINE L1 -181 7861 7740 705 240 60 56 chr2 24814258 24814491 -225873363 + MER119 DNA MER1_type 11 244 -339 2109 82 0 4 chr2 24814495 24814802 -225873052 + AluY SINE Alu 1 306 0 225 261 0 0 chr2 24814803 24814849 -225873005 + MER119 DNA MER1_type 537 582 -1 4703 214 139 56 chr2 24814849 24815124 -225872730 - L1MC4a LINE L1 -154 7654 7403 1947 136 0 7 chr2 24815124 24815418 -225872436 + AluSx SINE Alu 1 292 -20 4703 214 139 56 chr2 24815418 24815907 -225871947 - L1MC4a LINE L1 -405 7403 6956 1822 106 50 20 chr2 24815907 24816209 -225871645 - AluSx SINE Alu -1 311 1 4703 214 139 56 chr2 24816209 24817365 -225870489 - L1MC4a LINE L1 -852 6956 5573 715 180 0 11 chr2 24817503 24817739 -225870115 + AluJo SINE Alu 2 286 -26 872 150 0 0 chr2 24817816 24817949 -225869905 - FLAM_C SINE Alu 0 133 1 367 221 195 21 chr2 24817950 24818140 -225869714 - L1MC5 LINE L1 -51 7910 7688 2769 208 40 32 chr2 24818169 24818641 -225869213 + MLT1E3 LTR MaLR 1 468 -156 2128 106 3 0 chr2 24818641 24818933 -225868921 - AluSx SINE Alu -19 293 1 1676 163 28 0 chr2 24818936 24819225 -225868629 - AluJo SINE Alu -15 297 1 2769 208 40 32 chr2 24819225 24819367 -225868487 + MLT1E3 LTR MaLR 469 624 0 1693 206 0 0 chr2 24819520 24819830 -225868024 + AluSx SINE Alu 1 310 -2 202 111 0 44 chr2 24819835 24819880 -225867974 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 246 295 0 11 chr2 24819880 24819975 -225867879 + L1ME LINE L1 91 184 -5886 1343 238 92 37 chr2 24820138 24820196 -225867658 + MLT1G1 LTR MaLR 1 54 -541 1715 132 97 3 chr2 24820196 24820506 -225867348 - L1MB3 LINE L1 0 6183 5845 1343 238 92 37 chr2 24820506 24820829 -225867025 + MLT1G1 LTR MaLR 54 403 -192 241 323 86 0 chr2 24821020 24821113 -225866741 + L2 LINE L2 2880 2980 -333 329 193 34 0 chr2 24821234 24821322 -225866532 + GA-rich Low_complexity Low_complexity 5 95 0 241 305 133 29 chr2 24821322 24821427 -225866427 + L3 LINE CR1 586 701 -876 1526 188 14 0 chr2 24821428 24821720 -225866134 + AluJb SINE Alu 1 296 -16 1285 203 11 8 chr2 24821757 24822023 -225865831 - AluJo SINE Alu -11 301 35 2151 125 0 0 chr2 24822066 24822378 -225865476 - AluSx SINE Alu 0 312 1 1297 244 35 20 chr2 24822491 24822811 -225865043 - L1ME LINE L1 -507 5663 5334 1758 133 31 7 chr2 24822811 24823097 -225864757 + AluJo SINE Alu 6 298 -14 1297 244 35 20 chr2 24823097 24823178 -225864676 - L1ME LINE L1 -836 5334 5256 1496 234 84 24 chr2 24823196 24823666 -225864188 + L1ME3A LINE L1 5671 6165 -5 312 183 14 28 chr2 24824778 24824849 -225863005 - MER116 DNA Mariner -3 77 8 493 383 24 0 chr2 24825191 24825358 -225862496 + L2 LINE L2 3102 3272 0 1127 148 31 45 chr2 24825544 24825767 -225862087 + AluJo SINE Alu 1 220 -92 372 94 0 0 chr2 24825767 24825820 -225862034 + AluJo SINE Alu 86 138 -164 1294 169 20 128 chr2 24825820 24826163 -225861691 + AluYb8 SINE Alu 3 308 0 835 211 0 6 chr2 24826171 24826337 -225861517 + AluJo SINE Alu 137 301 -1 246 319 69 53 chr2 24826466 24826654 -225861200 - L2 LINE L2 -796 2518 2328 1184 124 0 6 chr2 24826655 24826824 -225861030 + THE1C LTR MaLR 1 168 -207 19758 77 20 24 chr2 24826827 24829465 -225858389 + HERVL LTR ERVL 2697 5325 -329 7357 121 10 6 chr2 24829465 24830501 -225857353 + THE1C-int LTR MaLR 541 1580 0 2119 115 50 21 chr2 24830501 24830840 -225857014 + THE1C LTR MaLR 1 349 -26 1426 173 111 7 chr2 24830842 24831113 -225856741 + LTR28 LTR ERV1 1 299 -721 853 85 0 0 chr2 24831113 24831219 -225856635 + MER61-int LTR ERV1 3755 3860 -1357 498 255 137 54 chr2 24831219 24831410 -225856444 + L1MC4a LINE L1 4285 4459 -1687 2175 121 0 3 chr2 24831410 24831723 -225856131 + AluSx SINE Alu 1 312 0 498 255 137 54 chr2 24831723 24831734 -225856120 + L1MC4a LINE L1 4459 4468 -1678 1786 164 0 3 chr2 24831734 24832026 -225855828 + AluJb SINE Alu 6 296 -16 498 255 137 54 chr2 24832026 24832245 -225855609 + L1MC4a LINE L1 4468 4742 -1404 293 221 129 49 chr2 24832919 24833082 -225854772 + L1MC4a LINE L1 5722 5897 -1911 1901 113 14 10 chr2 24833610 24833902 -225853952 + AluSg SINE Alu 18 310 0 227 98 0 59 chr2 24833932 24833983 -225853871 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 2201 92 7 7 chr2 24834015 24834318 -225853536 - AluSx SINE Alu -9 303 1 1931 122 18 0 chr2 24834655 24834984 -225852870 - AluSx SINE Alu 0 334 1 28 0 0 0 chr2 24835183 24835211 -225852643 + AT_rich Low_complexity Low_complexity 1 28 0 1819 100 75 0 chr2 24836077 24836356 -225851498 - AluSx SINE Alu -12 300 1 2257 105 0 0 chr2 24836565 24836869 -225850985 + AluSx SINE Alu 1 304 -8 186 103 0 0 chr2 24837004 24837033 -225850821 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 473 174 105 0 chr2 24837139 24837225 -225850629 + MER58A DNA MER1_type 13 107 0 1221 185 137 0 chr2 24837243 24837513 -225850341 - AluSx SINE Alu -1 311 5 1855 128 14 0 chr2 24837560 24837862 -225849992 + AluSx SINE Alu 1 306 0 668 176 120 44 chr2 24837899 24838002 -225849852 + MER20B DNA MER1_type 515 609 -174 2242 106 0 0 chr2 24838002 24838314 -225849540 - AluSx SINE Alu 0 312 1 668 176 120 44 chr2 24838314 24838460 -225849394 + MER20B DNA MER1_type 609 783 0 2199 115 0 0 chr2 24838480 24838785 -225849069 - AluSx SINE Alu -7 305 1 206 378 0 0 chr2 24839330 24839412 -225848442 + CT-rich Low_complexity Low_complexity 2 83 0 1909 134 0 10 chr2 24840512 24840811 -225847043 - AluSx SINE Alu -16 296 1 2280 84 0 7 chr2 24841450 24841749 -225846105 - AluSx SINE Alu -11 301 5 2067 123 0 0 chr2 24842384 24842676 -225845178 + AluSx SINE Alu 1 292 -20 754 286 100 4 chr2 24842687 24842946 -225844908 - MLT1K LTR MaLR -140 448 165 594 350 138 15 chr2 24843243 24843398 -225844456 - L2 LINE L2 -4 3268 3133 1828 122 11 17 chr2 24843398 24843533 -225844321 + AluJo SINE Alu 1 135 -177 2751 10 0 3 chr2 24843533 24843844 -225844010 + AluYb8 SINE Alu 1 310 -8 1828 122 11 17 chr2 24843844 24843995 -225843859 + AluJo SINE Alu 135 285 -27 222 37 0 0 chr2 24843995 24844022 -225843832 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 594 350 138 15 chr2 24844022 24844266 -225843588 - L2 LINE L2 -139 3133 2920 1858 176 11 37 chr2 24844266 24844537 -225843317 - MER7A DNA MER2_type -2696 342 83 2447 56 0 3 chr2 24844537 24844842 -225843012 + AluY SINE Alu 1 304 -7 1858 176 11 37 chr2 24844842 24844923 -225842931 - MER7A DNA MER2_type -2955 83 1 594 350 138 15 chr2 24844923 24845178 -225842676 - L2 LINE L2 -352 2920 2588 29 0 0 0 chr2 24845314 24845343 -225842511 + AT_rich Low_complexity Low_complexity 1 29 0 1883 145 3 10 chr2 24845343 24845639 -225842215 + AluSx SINE Alu 1 294 -18 1000 69 8 0 chr2 24845645 24845776 -225842078 - L1MA2 LINE L1 0 6304 6173 2076 82 0 56 chr2 24845799 24846102 -225841752 - AluSq SINE Alu -27 286 1 663 289 52 41 chr2 24846112 24846479 -225841375 + L1MC4 LINE L1 7298 7668 -374 348 115 19 0 chr2 24846662 24846714 -225841140 - AluSp/q SINE Alu -71 232 180 1058 161 11 0 chr2 24846758 24846938 -225840916 - AluSx SINE Alu -121 191 10 209 171 98 0 chr2 24846983 24847024 -225840830 + L2 LINE L2 2699 2743 -571 1214 154 168 62 chr2 24847029 24847436 -225840418 + Tigger5 DNA MER2_type 5 2323 0 397 289 66 0 chr2 24847828 24847949 -225839905 + L2 LINE L2 3144 3272 0 2154 108 0 0 chr2 24848016 24848311 -225839543 - AluSx SINE Alu -15 297 3 575 267 182 27 chr2 24848503 24848653 -225839201 + MIR SINE MIR 2 127 -135 216 0 0 0 chr2 24848653 24848677 -225839177 + (TA)n Simple_repeat Simple_repeat 2 25 0 2078 127 0 0 chr2 24848677 24848976 -225838878 - AluSx SINE Alu -13 299 1 575 267 182 27 chr2 24848976 24849049 -225838805 + MIR SINE MIR 126 261 -1 805 310 32 29 chr2 24849053 24849363 -225838491 - L3 LINE CR1 -428 1149 839 2084 119 0 0 chr2 24849372 24849665 -225838189 - AluSx SINE Alu -19 293 1 278 307 235 18 chr2 24849666 24849832 -225838022 - L3 LINE CR1 -916 661 460 369 143 39 39 chr2 24849887 24849964 -225837890 + L1MC/D LINE L1 5708 5784 -2024 264 352 16 0 chr2 24850358 24850486 -225837368 + LTR67 LTR ERVL 428 557 0 1372 185 10 40 chr2 24850548 24850845 -225837009 + AluJb SINE Alu 1 288 -24 2031 104 19 10 chr2 24850855 24851162 -225836692 + AluSg SINE Alu 1 310 0 461 288 95 18 chr2 24851304 24851526 -225836328 - HAL1 LINE L1 -1499 1008 770 * 628 238 65 65 chr2 24851519 24851813 -225836041 - HAL1 LINE L1 -2151 356 63 225 308 107 58 chr2 24851941 24852165 -225835689 - L3 LINE CR1 -1148 429 195 25 31 0 0 chr2 24852285 24852317 -225835537 + AT_rich Low_complexity Low_complexity 1 32 0 2186 92 7 3 chr2 24852789 24853095 -225834759 - AluSq SINE Alu -6 307 1 380 300 36 7 chr2 24853096 24853236 -225834618 + LTR67 LTR ERVL 414 557 0 365 319 93 51 chr2 24853909 24854072 -225833782 + HERVL LTR ERVL 826 981 -4783 303 28 0 0 chr2 24854072 24854108 -225833746 + (CA)n Simple_repeat Simple_repeat 2 37 0 365 319 93 51 chr2 24854108 24854298 -225833556 + HERVL LTR ERVL 981 1194 -4570 1874 162 3 10 chr2 24854706 24854725 -225833129 - AluJb SINE Alu -7 305 287 381 22 0 0 chr2 24854725 24854771 -225833083 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 1874 162 3 10 chr2 24854771 24855054 -225832800 - AluJb SINE Alu -25 287 5 1451 307 91 66 chr2 24855086 24855755 -225832099 + HERVL LTR ERVL 2155 2806 -2848 2348 85 10 0 chr2 24855755 24856049 -225831805 + AluSq SINE Alu 1 297 -16 1451 307 91 66 chr2 24856049 24856180 -225831674 + HERVL LTR ERVL 2806 2932 -2722 2173 104 17 17 chr2 24856180 24856479 -225831375 + AluSx SINE Alu 1 299 -13 1451 307 91 66 chr2 24856479 24856517 -225831337 + HERVL LTR ERVL 2932 2968 -2686 1835 145 24 10 chr2 24856517 24856813 -225831041 - AluJb SINE Alu -12 300 1 450 0 0 0 chr2 24856813 24856863 -225830991 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 1887 142 8 4 chr2 24856868 24857135 -225830719 - AluSx SINE Alu -44 268 1 1451 307 91 66 chr2 24857135 24857734 -225830120 + HERVL LTR ERVL 2971 3600 -2054 323 341 84 9 chr2 24857742 24857968 -225829886 + HERVL LTR ERVL 3731 3973 -1791 2077 138 10 0 chr2 24858043 24858348 -225829506 + AluSx SINE Alu 1 308 -4 2356 112 7 0 chr2 24858597 24858902 -225828952 + AluSx SINE Alu 1 307 -5 1961 152 0 7 chr2 24859577 24859879 -225827975 + AluJb SINE Alu 7 306 -6 283 283 66 9 chr2 24860330 24860436 -225827418 - MER5A DNA MER1_type -75 114 3 188 366 9 62 chr2 24860542 24860614 -225827240 + MIR3 SINE MIR 1 66 -142 2318 99 0 0 chr2 24860614 24860932 -225826922 - AluSx SINE Alu 0 312 1 188 366 9 62 chr2 24860932 24860971 -225826883 + MIR3 SINE MIR 66 106 -102 256 172 0 109 chr2 24861040 24861104 -225826750 - L2 LINE L2 -5 3308 3252 180 326 0 0 chr2 24861100 24861143 -225826711 + L2 LINE L2 3218 3260 -12 * 219 276 69 9 chr2 24861738 24861854 -225826000 + L2 LINE L2 1892 2014 -1300 298 274 77 72 chr2 24862052 24862260 -225825594 + L2 LINE L2 3044 3252 -20 1733 168 0 72 chr2 24862885 24863218 -225824636 - AluJb SINE Alu -3 309 1 287 264 22 43 chr2 24864201 24864312 -225823542 + MIR SINE MIR 13 122 -86 683 245 107 30 chr2 24865132 24865365 -225822489 + MIR SINE MIR 1 251 -11 2289 104 0 0 chr2 24865567 24865903 -225821951 - AluSg SINE Alu 0 336 1 349 238 140 14 chr2 24866407 24866550 -225821304 - MER53 DNA DNA -2 187 27 1692 98 0 0 chr2 24866550 24866764 -225821090 - AluSg/x SINE Alu -17 295 82 1527 129 110 36 chr2 24866812 24867121 -225820733 - MER21A LTR ERV1 -6 925 594 1339 173 60 11 chr2 24867277 24867653 -225820201 + MER21A LTR ERV1 1 418 -445 186 306 0 56 chr2 24867756 24867828 -225820026 + L2 LINE L2 3205 3272 0 2523 90 0 0 chr2 24867911 24868221 -225819633 - AluSx SINE Alu -2 310 1 2349 80 7 3 chr2 24869122 24869422 -225818432 + AluSx SINE Alu 12 312 0 339 274 125 21 chr2 24869923 24869950 -225817904 + L1ME4a LINE L1 5806 5829 -292 2208 108 0 14 chr2 24869950 24870245 -225817609 - AluSg SINE Alu -19 291 1 339 274 125 21 chr2 24870245 24870498 -225817356 + L1ME4a LINE L1 5829 6115 -6 393 356 34 34 chr2 24870627 24870863 -225816991 + L2 LINE L2 3016 3251 -21 678 226 55 0 chr2 24872063 24872209 -225815645 + MIR SINE MIR 80 233 -29 24 0 0 0 chr2 24872226 24872250 -225815604 + AT_rich Low_complexity Low_complexity 1 24 0 2415 90 3 0 chr2 24872940 24873250 -225814604 - AluSq SINE Alu -2 311 1 555 276 150 52 chr2 24875306 24875632 -225812222 - L2 LINE L2 -5 3308 2951 318 315 19 19 chr2 24876351 24876459 -225811395 - MIR SINE MIR -147 115 8 254 159 0 0 chr2 24876474 24876518 -225811336 + MER5A DNA MER1_type 9 52 -137 705 225 12 65 chr2 24876665 24876834 -225811020 + MIR SINE MIR 14 173 -89 233 158 0 0 chr2 24876834 24876872 -225810982 - MER4A LTR ERV1 0 664 627 2342 98 0 13 chr2 24876878 24877194 -225810660 - AluSx SINE Alu 0 312 1 1678 114 6 81 chr2 24877195 24877539 -225810315 - MER4A LTR ERV1 -25 639 262 677 91 0 10 chr2 24877540 24877639 -225810215 - MER4A LTR ERV1 -566 98 1 257 250 0 16 chr2 24877639 24877703 -225810151 + MIR SINE MIR 170 232 -30 206 357 21 49 chr2 24877883 24878026 -225809828 - MIR SINE MIR -121 141 3 2185 136 0 0 chr2 24878119 24878420 -225809434 - AluSx SINE Alu -11 301 1 4111 140 23 65 chr2 24878670 24879248 -225808606 - L1MC1 LINE L1 -420 5913 5312 2230 133 0 0 chr2 24879248 24879548 -225808306 - AluSx SINE Alu -12 300 1 4111 140 23 65 chr2 24879548 24879593 -225808261 - L1MC1 LINE L1 -1021 5312 5267 2810 99 8 3 chr2 24879593 24879966 -225807888 - THE1C LTR MaLR 0 375 1 4111 140 23 65 chr2 24879966 24880138 -225807716 - L1MC1 LINE L1 -1066 5267 5187 2184 110 24 0 chr2 24880138 24880428 -225807426 - AluSx SINE Alu -15 297 1 4111 140 23 65 chr2 24880428 24880688 -225807166 - L1MC1 LINE L1 -1146 5187 4918 393 265 71 83 chr2 24881266 24881478 -225806376 - MIR SINE MIR -36 226 9 2332 89 0 3 chr2 24884732 24885023 -225802831 - AluSc SINE Alu -19 290 1 306 50 0 0 chr2 24885059 24885099 -225802755 + (CA)n Simple_repeat Simple_repeat 2 41 0 318 291 51 0 chr2 24885100 24885179 -225802675 - L1MC4 LINE L1 -1345 6697 6615 2076 85 31 4 chr2 24885222 24885482 -225802372 - AluSg SINE Alu -30 280 14 1982 166 3 13 chr2 24885868 24886175 -225801679 + AluJb SINE Alu 1 304 -8 2140 130 19 7 chr2 24886660 24886968 -225800886 + AluJb SINE Alu 1 312 0 767 277 50 85 chr2 24887236 24887435 -225800419 + L1ME4a LINE L1 5479 5683 -438 1951 170 0 3 chr2 24887435 24887746 -225800108 - AluJb SINE Alu -2 310 1 767 277 50 85 chr2 24887746 24888069 -225799785 + L1ME4a LINE L1 5683 5976 -145 2262 132 0 0 chr2 24888069 24888372 -225799482 + AluSx SINE Alu 1 303 -9 767 277 50 85 chr2 24888372 24888509 -225799345 + L1ME4a LINE L1 5976 6116 -5 2338 97 0 0 chr2 24888679 24888969 -225798885 - AluSg SINE Alu -20 290 1 193 362 141 22 chr2 24888995 24889307 -225798547 + L2 LINE L2 2550 2898 -416 234 0 0 0 chr2 24891487 24891513 -225796341 + (T)n Simple_repeat Simple_repeat 1 26 0 2310 102 0 3 chr2 24892576 24892870 -225794984 + AluSq SINE Alu 1 293 -20 2407 78 0 0 chr2 24893153 24893447 -225794407 - AluY SINE Alu -17 294 1 380 218 122 107 chr2 24893747 24894010 -225793844 - MLT1J LTR MaLR -38 473 167 1852 160 10 3 chr2 24894010 24894303 -225793551 - AluJb SINE Alu -17 295 1 380 218 122 107 chr2 24894303 24894470 -225793384 - MLT1J LTR MaLR -344 167 4 193 29 59 0 chr2 24894552 24894586 -225793268 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 264 374 11 26 chr2 24894790 24894980 -225792874 + L3 LINE CR1 1171 1357 -220 2106 105 80 23 chr2 24894995 24895347 -225792507 - THE1C LTR MaLR 0 375 4 244 277 12 36 chr2 24895840 24895923 -225791931 + L2 LINE L2 3223 3303 -10 323 188 14 29 chr2 24896039 24896108 -225791746 + MIR3 SINE MIR 126 193 -15 46 33 0 0 chr2 24896617 24896677 -225791177 + AT_rich Low_complexity Low_complexity 1 60 0 320 147 0 137 chr2 24896677 24896721 -225791133 - L1MB7 LINE L1 -41 6143 6117 1986 126 12 64 chr2 24896721 24897047 -225790807 + AluSx SINE Alu 1 309 -3 320 147 0 137 chr2 24897047 24897097 -225790757 - L1MB7 LINE L1 -67 6117 6062 444 308 77 0 chr2 24897345 24897501 -225790353 + MIR3 SINE MIR 16 183 -25 2245 126 7 0 chr2 24897797 24898106 -225789748 - AluSx SINE Alu -1 311 1 2101 125 0 30 chr2 24898994 24899155 -225788699 - AluSx SINE Alu -18 294 145 2119 115 52 0 chr2 24899155 24899441 -225788413 - AluSx SINE Alu -11 301 1 2101 125 0 30 chr2 24899441 24899582 -225788272 - AluSx SINE Alu -167 145 1 205 200 22 0 chr2 24899641 24899686 -225788168 + GA-rich Low_complexity Low_complexity 5 50 0 186 333 32 0 chr2 24899722 24899785 -225788069 - MIR SINE MIR -66 142 78 242 361 93 10 chr2 24899895 24900100 -225787754 - L3 LINE CR1 -97 1480 1259 310 252 102 24 chr2 24900137 24900264 -225787590 + MER5B DNA MER1_type 42 178 0 183 184 0 0 chr2 24900293 24900331 -225787523 + CT-rich Low_complexity Low_complexity 3 40 0 2140 117 33 0 chr2 24900530 24900830 -225787024 - AluSx SINE Alu 0 312 3 1327 167 37 35 chr2 24901204 24901417 -225786437 + L1MB5 LINE L1 4958 5169 -1005 2098 121 7 23 chr2 24901417 24901722 -225786132 + AluSx SINE Alu 3 302 -10 1327 167 37 35 chr2 24901722 24902578 -225785276 + L1MB5 LINE L1 5169 6174 0 427 305 51 30 chr2 24903416 24903968 -225783886 - L1MC5 LINE L1 -271 7690 7222 2450 153 62 46 chr2 24904201 24904698 -225783156 + MLT1D LTR MaLR 1 505 0 209 73 0 49 chr2 24905922 24905963 -225781891 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2270 82 58 0 chr2 24906101 24906395 -225781459 + AluY SINE Alu 1 311 0 434 262 66 87 chr2 24906536 24906719 -225781135 - MIR SINE MIR -82 180 2 1995 139 17 3 chr2 24907601 24907902 -225779952 + AluJb SINE Alu 1 305 -7 309 302 0 63 chr2 24907902 24908011 -225779843 + MER5A DNA MER1_type 66 166 -23 267 395 15 24 chr2 24908011 24908216 -225779638 + MIR SINE MIR 1 203 -59 783 209 24 80 chr2 24908216 24908465 -225779389 + MLT1D LTR MaLR 1 235 -270 2151 128 7 0 chr2 24909039 24909329 -225778525 + AluSx SINE Alu 1 292 -20 2160 100 7 17 chr2 24910110 24910411 -225777443 - AluSp SINE Alu -15 298 1 484 156 31 0 chr2 24910561 24910657 -225777197 - L1MA9 LINE L1 -277 6035 5937 2103 103 43 7 chr2 24910686 24910967 -225776887 - AluSx SINE Alu -21 291 1 827 230 56 37 chr2 24910967 24911088 -225776766 + MLT1A2 LTR MaLR 34 151 -223 718 80 0 0 chr2 24911088 24911188 -225776666 + HY3 scRNA scRNA 1 100 -1 827 230 56 37 chr2 24911188 24911218 -225776636 + MLT1A2 LTR MaLR 151 179 -195 1945 145 19 13 chr2 24911218 24911528 -225776326 + AluJo SINE Alu 1 312 0 827 230 56 37 chr2 24911528 24911743 -225776111 + MLT1A2 LTR MaLR 179 358 -16 342 294 37 0 chr2 24912043 24912152 -225775702 - L1MC4 LINE L1 -144 7898 7786 849 235 37 89 chr2 24912288 24912372 -225775482 - L1M4 LINE L1 -2793 3353 3266 2352 111 0 9 chr2 24912372 24912688 -225775166 - AluSp SINE Alu 0 313 1 849 235 37 89 chr2 24912688 24912928 -225774926 - L1M4 LINE L1 -2880 3266 3015 519 205 137 0 chr2 24912928 24913045 -225774809 - FLAM_A SINE Alu 0 133 1 849 235 37 89 chr2 24913045 24913406 -225774448 - L1M4 LINE L1 -3131 3015 2727 1038 129 14 0 chr2 24913507 24913654 -225774200 + AluSg/x SINE Alu 144 292 -20 2275 100 3 10 chr2 24914435 24914735 -225773119 - AluSp SINE Alu -15 298 1 1652 143 18 73 chr2 24914887 24914978 -225772876 - L1MA9 LINE L1 -277 6035 5941 2190 102 0 3 chr2 24914978 24915304 -225772550 - AluSx SINE Alu 0 325 1 1652 143 18 73 chr2 24915304 24915554 -225772300 - L1MA9 LINE L1 -371 5941 5712 322 200 133 0 chr2 24915587 24915662 -225772192 + L1MA9 LINE L1 6159 6243 -69 648 118 18 0 chr2 24915663 24915773 -225772081 + FLAM_C SINE Alu 32 143 0 312 128 7 0 chr2 24915773 24915830 -225772024 + Alu SINE Alu 1 45 -254 2230 94 13 7 chr2 24916003 24916302 -225771552 + AluY SINE Alu 1 301 -10 2276 103 10 13 chr2 24916621 24916976 -225770878 + AluSq SINE Alu 1 354 0 1528 266 90 53 chr2 24917002 24918060 -225769794 + L2 LINE L2 2184 3289 -24 2209 129 0 3 chr2 24918060 24918362 -225769492 - AluSx SINE Alu -11 301 1 1528 266 90 53 chr2 24918362 24918384 -225769470 + L2 LINE L2 3289 3309 -4 1791 231 54 91 chr2 24918620 24919153 -225768701 + LTR8 LTR ERV1 17 519 -172 2191 105 7 0 chr2 24919153 24919447 -225768407 + AluSq SINE Alu 6 301 -12 1791 231 54 91 chr2 24919447 24919614 -225768240 + LTR8 LTR ERV1 519 691 0 229 88 0 0 chr2 24919716 24919750 -225768104 - MER3 DNA MER1_type -160 49 16 431 208 0 0 chr2 24919781 24919877 -225767977 - L1ME2 LINE L1 -208 5956 5861 1867 149 0 50 chr2 24919983 24920306 -225767548 - AluJo SINE Alu -1 311 5 216 350 68 10 chr2 24920426 24920529 -225767325 - L2 LINE L2 -695 2619 2511 239 324 14 0 chr2 24921245 24921319 -225766535 - L2 LINE L2 -210 3062 2988 413 255 0 0 chr2 24921631 24921729 -225766125 + L1ME1 LINE L1 6066 6163 -3 264 139 278 0 chr2 24921800 24921872 -225765982 - MIR SINE MIR -56 152 61 1978 111 69 7 chr2 24921917 24922206 -225765648 - AluSx SINE Alu -5 307 1 427 213 132 46 chr2 24922504 24922539 -225765315 + MER53 DNA DNA 1 32 -157 1827 130 43 14 chr2 24922539 24922839 -225765015 + AluJo SINE Alu 1 308 0 427 213 132 46 chr2 24922839 24922976 -225764878 + MER53 DNA DNA 32 189 0 314 203 7 61 chr2 24922983 24923131 -225764723 + A-rich Low_complexity Low_complexity 2 141 0 22 0 0 0 chr2 24923826 24923848 -225764006 + AT_rich Low_complexity Low_complexity 1 22 0 524 333 33 14 chr2 24923862 24924138 -225763716 + L1ME4a LINE L1 5603 5883 -238 227 186 34 0 chr2 24924193 24924252 -225763602 - L1MD2 LINE L1 0 6359 6299 1272 148 10 5 chr2 24924257 24924466 -225763388 + AluSc SINE Alu 1 210 -99 1171 115 11 17 chr2 24924885 24925079 -225762775 + AluSp SINE Alu 114 306 0 2833 141 40 82 chr2 24925084 24925221 -225762633 - L1MB8 LINE L1 -16 6162 6021 586 152 9 0 chr2 24925221 24925326 -225762528 + L1PB2 LINE L1 6040 6145 -6 1947 119 13 32 chr2 24925326 24925658 -225762196 + AluSx SINE Alu 1 312 0 2833 141 40 82 chr2 24925658 24925885 -225761969 - L1MB8 LINE L1 -156 6022 5787 2424 103 3 0 chr2 24925885 24926197 -225761657 - AluSp SINE Alu 0 313 1 2833 141 40 82 chr2 24926197 24926485 -225761369 - L1MB8 LINE L1 -391 5787 5536 344 247 11 44 chr2 24926507 24926660 -225761194 - MER20B DNA MER1_type -41 742 594 2116 128 0 17 chr2 24926660 24926958 -225760896 - AluSx SINE Alu -18 294 2 344 247 11 44 chr2 24926958 24926986 -225760868 - MER20B DNA MER1_type -189 594 567 297 183 0 0 chr2 24927218 24927278 -225760576 + (CA)n Simple_repeat Simple_repeat 1 60 0 407 227 82 67 chr2 24928454 24928648 -225759206 - MIR3 SINE MIR -6 202 6 1315 121 0 0 chr2 24928649 24928822 -225759032 - AluJb SINE Alu -15 297 125 180 111 0 0 chr2 24928829 24928856 -225758998 + (TA)n Simple_repeat Simple_repeat 2 28 0 2045 193 156 34 chr2 24929448 24930147 -225757707 - LTR48 LTR ERV1 0 787 4 3894 81 9 28 chr2 24930305 24930483 -225757371 - MER41A LTR ERV1 0 554 374 2403 95 0 0 chr2 24930483 24930779 -225757075 - AluSg1 SINE Alu -13 296 1 3894 81 9 28 chr2 24930779 24931165 -225756689 - MER41A LTR ERV1 -180 374 1 209 231 0 19 chr2 24931258 24931310 -225756544 - L2 LINE L2 -13 3300 3250 195 324 95 14 chr2 24931951 24932161 -225755693 - L2 LINE L2 -1018 2296 2070 2292 99 3 26 chr2 24932178 24932491 -225755363 + AluSx SINE Alu 1 306 -6 322 242 167 30 chr2 24932531 24932663 -225755191 - L1ME LINE L1 -398 5723 5574 226 318 84 50 chr2 24932942 24933121 -225754733 + MIR3 SINE MIR 16 200 -8 347 183 144 10 chr2 24933315 24933419 -225754435 + L2 LINE L2 2571 2688 -626 2111 145 0 0 chr2 24933420 24933724 -225754130 + AluSx SINE Alu 1 304 -8 248 242 32 0 chr2 24933733 24933795 -225754059 + L2 LINE L2 2760 2823 -491 441 0 0 0 chr2 24933818 24933867 -225753987 + (CA)n Simple_repeat Simple_repeat 1 49 0 649 272 48 9 chr2 24933911 24934139 -225753715 + L2 LINE L2 2991 3227 -86 189 139 116 0 chr2 24934377 24934420 -225753434 + L2 LINE L2 3202 3249 -64 182 240 40 20 chr2 24934874 24934924 -225752930 - L2 LINE L2 -1 3312 3262 2550 83 0 0 chr2 24934957 24935269 -225752585 + AluSp SINE Alu 2 313 0 979 75 0 8 chr2 24935283 24935403 -225752451 + AluSq/x SINE Alu 21 139 -174 330 70 0 0 chr2 24935403 24935473 -225752381 + Alu SINE Alu 243 312 0 1591 139 68 24 chr2 24935671 24936026 -225751828 + AluJb SINE Alu 1 368 0 338 333 24 0 chr2 24936433 24936643 -225751211 + L1 LINE L1 4369 4583 -1563 252 333 39 22 chr2 24936870 24937182 -225750672 + L1 LINE L1 4735 5051 -1095 1192 130 0 0 chr2 24937331 24937500 -225750354 + AluSp SINE Alu 137 305 -8 2254 118 0 10 chr2 24937510 24937823 -225750031 + AluSx SINE Alu 1 310 -2 24 0 0 0 chr2 24938516 24938540 -225749314 + AT_rich Low_complexity Low_complexity 1 24 0 640 226 55 0 chr2 24938557 24938703 -225749151 - MIR SINE MIR -29 233 80 756 151 13 10 chr2 24940022 24940328 -225747526 + CT-rich Low_complexity Low_complexity 1 307 0 291 307 0 0 chr2 24940355 24940443 -225747411 - MIR SINE MIR -2 260 173 2215 108 40 0 chr2 24940741 24941038 -225746816 - AluSg SINE Alu -1 309 1 2198 113 0 0 chr2 24941104 24941412 -225746442 - AluSq SINE Alu 0 308 1 845 236 12 56 chr2 24941412 24941662 -225746192 - L1MA9 LINE L1 -362 5950 5712 573 159 9 18 chr2 24941771 24941884 -225745970 + FLAM_C SINE Alu 32 143 0 1304 108 48 0 chr2 24941894 24942080 -225745774 + AluY SINE Alu 1 195 -116 207 324 93 19 chr2 24942346 24942454 -225745400 - MIR SINE MIR -122 140 25 23 0 0 0 chr2 24943087 24943110 -225744744 + AT_rich Low_complexity Low_complexity 1 23 0 2058 132 14 0 chr2 24943208 24943495 -225744359 + AluSx SINE Alu 1 291 -21 2456 61 0 0 chr2 24943499 24943807 -225744047 + AluSc SINE Alu 1 308 0 2365 107 3 3 chr2 24944027 24944337 -225743517 - AluSx SINE Alu -2 310 1 2385 110 0 0 chr2 24945094 24945402 -225742452 - AluSx SINE Alu -4 308 1 910 273 105 19 chr2 24945659 24946069 -225741785 + L2 LINE L2 2867 3311 -2 2118 142 10 0 chr2 24946216 24946512 -225741342 + AluJb SINE Alu 1 299 -13 250 136 0 0 chr2 24946932 24946976 -225740878 - MER4-int LTR ERV1 -5437 1161 1118 495 0 0 0 chr2 24947413 24947468 -225740386 + (TG)n Simple_repeat Simple_repeat 1 55 0 2426 57 3 41 chr2 24947580 24947898 -225739956 + AluY SINE Alu 1 306 -5 1977 163 0 3 chr2 24947909 24948210 -225739644 + AluSx SINE Alu 1 300 -12 2279 51 51 0 chr2 24948801 24949077 -225738777 + AluY SINE Alu 1 290 -21 843 206 0 57 chr2 24949316 24949491 -225738363 - AluSg/x SINE Alu -14 296 132 2297 122 0 0 chr2 24949491 24949795 -225738059 - AluSx SINE Alu -8 304 1 2545 45 10 19 chr2 24951122 24951436 -225736418 + AluY SINE Alu 1 311 0 243 0 0 0 chr2 24951765 24951792 -225736062 + (CGGGGG)n Simple_repeat Simple_repeat 1 27 0 881 92 8 0 chr2 24952328 24952447 -225735407 + AluY SINE Alu 176 295 -16 228 233 207 0 chr2 24952475 24952591 -225735263 + L1ME4a LINE L1 5978 6117 -4 2437 81 0 3 chr2 24952594 24952889 -225734965 + AluSq SINE Alu 1 294 -19 436 282 43 62 chr2 24953337 24953479 -225734375 + MIR SINE MIR 20 158 -104 2180 136 0 3 chr2 24953479 24953787 -225734067 + AluSx SINE Alu 2 308 -4 436 282 43 62 chr2 24953787 24953853 -225734001 + MIR SINE MIR 158 224 -38 1709 193 3 10 chr2 24954507 24954808 -225733046 + AluJo SINE Alu 1 299 -13 1654 171 44 14 chr2 24954943 24955305 -225732549 - L1MC1 LINE L1 0 6333 5961 196 178 44 0 chr2 24956622 24956667 -225731187 + L2 LINE L2 3220 3266 -6 300 303 23 45 chr2 24956708 24956840 -225731014 - L1ME3A LINE L1 -36 6134 6006 236 149 149 0 chr2 24956873 24956940 -225730914 - L1ME3A LINE L1 -232 5938 5862 2203 122 3 16 chr2 24956956 24957268 -225730586 + AluSq SINE Alu 1 308 -5 2121 107 4 4 chr2 24957490 24957771 -225730083 - AluSx SINE Alu -31 281 1 203 232 0 36 chr2 24957944 24958000 -225729854 + (TATG)n Simple_repeat Simple_repeat 3 56 0 256 93 0 23 chr2 24958099 24958142 -225729712 - L1ME3A LINE L1 -2071 5737 5696 343 306 208 0 chr2 24958145 24958318 -225729536 - L1ME3A LINE L1 -2165 5643 5435 2269 96 17 13 chr2 24958345 24958647 -225729207 + AluSx SINE Alu 1 303 -9 272 0 79 0 chr2 24958762 24958800 -225729054 + CT-rich Low_complexity Low_complexity 4 44 0 1951 109 62 7 chr2 24958926 24959202 -225728652 + AluSg SINE Alu 9 299 -11 276 328 16 55 chr2 24959283 24959411 -225728443 + MIR SINE MIR 60 182 -80 428 186 372 0 chr2 24960116 24960245 -225727609 - MER58B DNA MER1_type 0 341 165 663 208 8 8 chr2 24960249 24960379 -225727475 - FLAM_A SINE Alu -2 131 2 698 190 76 0 chr2 24960396 24960554 -225727300 + MLT1B LTR MaLR 7 176 -214 817 183 59 0 chr2 24960556 24960709 -225727145 + AluJb SINE Alu 137 298 -14 2443 39 0 14 chr2 24960716 24961041 -225726813 + AluY SINE Alu 5 325 0 684 167 18 11 chr2 24961080 24961229 -225726625 + MLT1C LTR MaLR 239 466 -1 189 0 0 0 chr2 24961258 24961279 -225726575 + (TTC)n Simple_repeat Simple_repeat 3 23 0 1236 89 0 6 chr2 24961440 24961597 -225726257 + AluJb SINE Alu 72 227 -85 3752 172 81 55 chr2 24962211 24962881 -225724973 - LTR13 LTR ERVK 0 954 252 2595 60 7 0 chr2 24962881 24963182 -225724672 - AluY SINE Alu -8 303 1 3752 172 81 55 chr2 24963182 24963441 -225724413 - LTR13 LTR ERVK -702 252 1 2122 135 0 3 chr2 24963496 24963793 -225724061 - AluJb SINE Alu -16 296 1 248 288 209 17 chr2 24963799 24963976 -225723878 - MIR SINE MIR -12 250 40 2499 69 0 0 chr2 24964248 24964539 -225723315 - AluSc SINE Alu -18 291 1 254 156 47 0 chr2 24964897 24964961 -225722893 + GA-rich Low_complexity Low_complexity 2 68 0 306 274 11 63 chr2 24965913 24966008 -225721846 - L1MC4 LINE L1 -1340 6702 6613 185 196 18 0 chr2 24966015 24966071 -225721783 + (TA)n Simple_repeat Simple_repeat 1 57 0 2230 122 3 0 chr2 24966124 24966427 -225721427 + AluSg SINE Alu 1 304 -6 2290 97 7 10 chr2 24967074 24967374 -225720480 + AluSg SINE Alu 1 299 -11 969 269 60 95 chr2 24967797 24968324 -225719530 - L2 LINE L2 -105 3208 2708 2185 105 0 7 chr2 24968324 24968631 -225719223 - AluSx SINE Alu 0 306 2 969 269 60 95 chr2 24968631 24968898 -225718956 - L2 LINE L2 -605 2708 2433 535 224 115 0 chr2 24969001 24969157 -225718697 + L1M4 LINE L1 5520 5693 -485 2172 115 0 3 chr2 24969159 24969445 -225718409 + AluSx SINE Alu 1 285 -27 297 0 0 0 chr2 24969457 24969490 -225718364 + (TG)n Simple_repeat Simple_repeat 2 34 0 2213 167 54 11 chr2 24969495 24969959 -225717895 + L1HS LINE L1 5639 6123 -61 2232 120 3 0 chr2 24969960 24970261 -225717593 - AluSx SINE Alu -10 302 1 515 299 145 43 chr2 24972283 24972608 -225715246 - L2 LINE L2 -5 3308 2951 294 315 19 19 chr2 24973327 24973435 -225714419 - MIR SINE MIR -147 115 8 237 159 0 0 chr2 24973450 24973494 -225714360 + MER5A DNA MER1_type 9 52 -137 642 231 12 65 chr2 24973641 24973810 -225714044 + MIR SINE MIR 14 173 -89 1690 111 5 126 chr2 24973810 24973854 -225714000 - MER4A LTR ERV1 0 664 616 2347 98 0 13 chr2 24973854 24974170 -225713684 - AluSx SINE Alu 0 312 1 1690 111 5 126 chr2 24974170 24974515 -225713339 - MER4A LTR ERV1 -48 616 262 682 91 0 10 chr2 24974516 24974615 -225713239 - MER4A LTR ERV1 -566 98 1 246 250 0 16 chr2 24974615 24974679 -225713175 + MIR SINE MIR 170 232 -30 2205 133 0 0 chr2 24975095 24975396 -225712458 - AluSx SINE Alu -11 301 1 4113 139 23 64 chr2 24975646 24976224 -225711630 - L1MC1 LINE L1 -420 5913 5313 2208 137 0 0 chr2 24976224 24976524 -225711330 - AluSx SINE Alu -12 300 1 4113 139 23 64 chr2 24976524 24976569 -225711285 - L1MC1 LINE L1 -1020 5313 5268 2429 115 16 11 chr2 24976569 24976942 -225710912 - THE1C LTR MaLR 0 375 1 4113 139 23 64 chr2 24976942 24977112 -225710742 - L1MC1 LINE L1 -1065 5268 5187 2195 110 24 0 chr2 24977112 24977402 -225710452 - AluSx SINE Alu -15 297 1 4113 139 23 64 chr2 24977402 24977662 -225710192 - L1MC1 LINE L1 -1146 5187 4918 377 275 155 26 chr2 24978240 24978433 -225709421 - MIR SINE MIR -36 226 9 248 159 191 0 chr2 24980911 24980974 -225706880 - MIR3 SINE MIR -25 183 109 821 113 8 15 chr2 24980986 24981119 -225706735 + FLAM_C SINE Alu 2 133 0 2299 119 0 0 chr2 24981300 24981602 -225706252 - AluSx SINE Alu -10 302 1 287 228 0 0 chr2 24982463 24982520 -225705334 - MIR SINE MIR -74 188 132 30 27 0 0 chr2 24982813 24982850 -225705004 + AT_rich Low_complexity Low_complexity 1 37 0 270 0 0 0 chr2 24982859 24982889 -225704965 + (TG)n Simple_repeat Simple_repeat 2 31 0 2211 132 3 0 chr2 24983117 24983420 -225704434 + AluSx SINE Alu 1 304 -8 720 125 0 9 chr2 24985893 24986005 -225701849 - FLAM_A SINE Alu -4 138 28 2284 112 7 0 chr2 24986330 24986635 -225701219 - AluSx SINE Alu -2 310 4 2297 121 0 0 chr2 24989461 24989768 -225698086 + AluSx SINE Alu 1 307 -5 219 319 127 24 chr2 24990392 24990518 -225697336 - MIR SINE MIR -57 205 68 198 103 0 0 chr2 24991625 24991654 -225696200 + (CTG)n Simple_repeat Simple_repeat 3 31 0 2159 113 0 25 chr2 24992204 24992522 -225695332 + AluSx SINE Alu 1 310 -2 834 104 0 0 chr2 24992661 24992776 -225695078 + AluY SINE Alu 197 311 0 365 310 118 27 chr2 24993214 24993401 -225694453 - MIR3 SINE MIR 0 208 5 1343 144 0 5 chr2 24993660 24993862 -225693992 + AluSg/x SINE Alu 110 310 -2 318 191 16 0 chr2 24994561 24994624 -225693230 - AluJ/FLAM SINE Alu -218 84 21 741 273 10 19 chr2 24994626 24994667 -225693187 - MLT1G LTR MaLR 0 590 550 1719 98 4 18 chr2 24994667 24994892 -225692962 - AluSg/x SINE Alu -15 295 74 741 273 10 19 chr2 24994892 24995055 -225692799 - MLT1G LTR MaLR -40 550 388 2138 144 0 0 chr2 24995055 24995354 -225692500 + AluSx SINE Alu 1 299 -13 252 364 18 12 chr2 24996107 24996272 -225691582 + L1ME4a LINE L1 5432 5597 -2211 527 88 20 20 chr2 24996296 24996398 -225691456 + (TTTC)n Simple_repeat Simple_repeat 1 102 0 2077 139 0 0 chr2 24996420 24996708 -225691146 - AluSx SINE Alu -12 300 13 1693 188 3 38 chr2 24996901 24997188 -225690666 + AluJo SINE Alu 1 277 -35 291 93 0 0 chr2 24997188 24997231 -225690623 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1693 188 3 38 chr2 24997231 24997263 -225690591 + AluJo SINE Alu 277 309 -3 271 337 47 0 chr2 24997317 24997403 -225690451 + L2 LINE L2 3197 3286 -27 354 362 93 41 chr2 24997488 24997756 -225690098 + L1ME4a LINE L1 5840 6121 0 2304 121 0 3 chr2 24997756 24998069 -225689785 + AluJb SINE Alu 1 312 0 288 217 0 29 chr2 24998104 24998173 -225689681 + MLT1G3 LTR MaLR 451 517 -13 473 298 44 58 chr2 24998337 24998542 -225689312 - L2 LINE L2 -1 3312 3111 372 242 152 12 chr2 24998616 24998781 -225689073 + HAL1 LINE L1 2025 2212 -295 181 253 44 44 chr2 24998942 24999033 -225688821 - L2 LINE L2 -2 3311 3221 1679 183 47 4 chr2 24999163 24999442 -225688412 - AluJo SINE Alu -21 291 1 275 347 57 8 chr2 25000559 25000683 -225687171 - MIR3 SINE MIR -15 193 64 2471 67 0 0 chr2 25003390 25003688 -225684166 + AluSp SINE Alu 1 298 -15 1668 160 12 89 chr2 25005773 25006098 -225681756 - AluJb SINE Alu -12 300 1 2280 75 0 0 chr2 25006182 25006475 -225681379 + AluSc SINE Alu 1 293 -16 238 315 87 0 chr2 25006668 25006760 -225681094 - LTR67 LTR ERVL -293 264 165 813 264 17 30 chr2 25006766 25007061 -225680793 - L1M4 LINE L1 -2250 3896 3606 1100 172 48 131 chr2 25007164 25007319 -225680535 - AluJo SINE Alu -13 289 123 198 0 0 0 chr2 25007319 25007341 -225680513 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1977 121 0 27 chr2 25007348 25007646 -225680208 - AluSx SINE Alu -22 290 1 2232 87 0 20 chr2 25007649 25007949 -225679905 - AluSx SINE Alu -13 299 6 1100 172 48 131 chr2 25007949 25008095 -225679759 - AluJo SINE Alu -187 115 2 363 229 150 0 chr2 25008144 25008284 -225679570 - L1ME4a LINE L1 -223 5898 5738 2106 127 7 0 chr2 25009052 25009352 -225678502 - AluSx SINE Alu -10 302 1 186 43 0 0 chr2 25009755 25009778 -225678076 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 2142 105 20 0 chr2 25009786 25010082 -225677772 - AluSx SINE Alu -10 302 1 264 326 10 36 chr2 25010152 25010348 -225677506 + L1MC5 LINE L1 7587 7777 -184 183 235 20 20 chr2 25011854 25011905 -225675949 + MER5A DNA MER1_type 136 186 -3 2212 109 0 10 chr2 25011910 25012223 -225675631 - AluSx SINE Alu -2 310 1 1906 125 0 14 chr2 25013202 25013482 -225674372 - AluSx SINE Alu -36 276 1 1746 171 3 16 chr2 25013764 25014069 -225673785 - AluJb SINE Alu -3 309 9 2146 77 50 17 chr2 25015639 25015937 -225671917 + AluSq SINE Alu 1 308 -5 203 271 17 17 chr2 25016059 25016118 -225671736 - MER5B DNA MER1_type -17 161 103 * 273 228 38 13 chr2 25016065 25016144 -225671710 + MER5A DNA MER1_type 35 115 -74 635 282 43 27 chr2 25016418 25016606 -225671248 - MER91A DNA MER1_type -4 192 2 21 36 0 0 chr2 25018025 25018053 -225669801 + GC_rich Low_complexity Low_complexity 1 28 0 246 132 40 26 chr2 25018119 25018195 -225669659 + (CCCCG)n Simple_repeat Simple_repeat 5 81 0 704 264 158 18 chr2 25019070 25019354 -225668500 + MER5C DNA MER1_type 1 324 0 307 313 20 0 chr2 25020469 25020568 -225667286 + GA-rich Low_complexity Low_complexity 2 102 0 701 164 8 16 chr2 25020684 25020812 -225667042 + AluSg/x SINE Alu 180 306 -4 412 31 47 0 chr2 25021044 25021108 -225666746 - L1PB2 LINE L1 -2 6149 6083 2382 60 10 10 chr2 25021111 25021411 -225666443 - AluY SINE Alu -11 300 1 228 287 32 51 chr2 25021446 25021603 -225666251 - L1ME4a LINE L1 -366 5755 5602 1999 124 3 3 chr2 25022047 25022389 -225665465 + AluSx SINE Alu 1 342 0 2258 92 7 0 chr2 25022893 25023188 -225664666 - AluSp SINE Alu -16 297 1 1041 89 0 0 chr2 25023537 25023672 -225664182 - AluSq/x SINE Alu -178 135 1 180 0 0 0 chr2 25023815 25023835 -225664019 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1869 133 0 14 chr2 25023840 25024119 -225663735 - AluSx SINE Alu -37 275 1 348 361 137 17 chr2 25024315 25024783 -225663071 - L3 LINE CR1 -143 1434 911 260 250 0 0 chr2 25025307 25025347 -225662507 + A-rich Low_complexity Low_complexity 1 40 0 254 156 47 0 chr2 25026092 25026156 -225661698 + GA-rich Low_complexity Low_complexity 2 68 0 322 274 11 63 chr2 25027109 25027204 -225660650 - L1MC4 LINE L1 -1340 6702 6613 301 300 100 20 chr2 25027189 25027320 -225660534 - L1MCa LINE L1 -4340 2086 1940 * 2242 77 0 17 chr2 25027320 25027620 -225660234 + AluSx SINE Alu 1 295 -17 301 300 100 20 chr2 25027620 25027638 -225660216 - L1MCa LINE L1 -4486 1940 1925 29 28 0 0 chr2 25027658 25027694 -225660160 + AT_rich Low_complexity Low_complexity 1 36 0 1888 118 45 3 chr2 25027986 25028273 -225659581 - AluSx SINE Alu -13 299 1 235 272 23 100 chr2 25028281 25028453 -225659401 - MIR SINE MIR -52 210 51 743 116 25 8 chr2 25030002 25030123 -225657731 + FLAM_C SINE Alu 4 126 -7 2072 78 11 0 chr2 25030131 25030413 -225657441 - AluSp SINE Alu -1 312 28 310 362 20 40 chr2 25031002 25031154 -225656700 + L1MDa LINE L1 2448 2596 -3944 24 32 0 0 chr2 25031480 25031511 -225656343 + AT_rich Low_complexity Low_complexity 1 31 0 242 44 0 67 chr2 25036565 25036610 -225651244 + (A)n Simple_repeat Simple_repeat 1 42 0 182 188 0 0 chr2 25037420 25037452 -225650402 - L2 LINE L2 -26 3287 3256 2279 90 10 0 chr2 25037983 25038284 -225649570 - AluSx SINE Alu -8 304 1 2291 84 3 0 chr2 25038867 25039164 -225648690 - AluSx SINE Alu -14 298 1 343 257 30 10 chr2 25040157 25040258 -225647596 + L1ME1 LINE L1 6020 6122 -44 2169 102 10 0 chr2 25040285 25040579 -225647275 + AluSx SINE Alu 1 297 -15 765 197 138 37 chr2 25042216 25042404 -225645450 + MER3 DNA MER1_type 1 207 -2 666 183 0 0 chr2 25044064 25044168 -225643686 - AluJb SINE Alu -208 104 1 402 271 86 56 chr2 25045624 25045821 -225642033 + L1ME4a LINE L1 5619 5809 -312 2178 89 21 0 chr2 25045821 25046112 -225641742 + AluSg SINE Alu 1 297 -13 402 271 86 56 chr2 25046112 25046287 -225641567 + L1ME4a LINE L1 5809 6002 -119 2230 109 7 0 chr2 25051341 25051644 -225636210 - AluSx SINE Alu -7 305 1 1170 33 0 20 chr2 25051666 25051816 -225636038 - L1PA4 LINE L1 -3 6152 6006 639 134 80 27 chr2 25051928 25052040 -225635814 + FLAM_A SINE Alu 13 130 -12 233 282 0 39 chr2 25053920 25054023 -225633831 + G-rich Low_complexity Low_complexity 3 101 0 305 263 0 0 chr2 25055071 25055151 -225632703 + G-rich Low_complexity Low_complexity 1 80 0 21 0 0 0 chr2 25055280 25055301 -225632553 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 25055406 25055427 -225632427 + GC_rich Low_complexity Low_complexity 1 21 0 260 259 69 61 chr2 25056568 25056586 -225631268 + MIR SINE MIR 39 55 -163 2374 87 0 0 chr2 25056586 25056886 -225630968 + AluSg SINE Alu 1 300 -10 260 259 69 61 chr2 25056886 25056985 -225630869 + MIR SINE MIR 55 155 -63 230 337 39 22 chr2 25059082 25059251 -225628603 + L2 LINE L2 2884 3058 -214 969 198 88 5 chr2 25059251 25059443 -225628411 - MER3 DNA MER1_type -1 208 1 232 324 0 0 chr2 25059456 25059527 -225628327 + CT-rich Low_complexity Low_complexity 3 73 0 189 326 72 43 chr2 25059604 25059742 -225628112 + L2 LINE L2 3165 3306 -7 376 296 92 33 chr2 25060484 25060636 -225627218 - MER5B DNA MER1_type -12 166 6 194 129 0 0 chr2 25060658 25060689 -225627165 - MIR SINE MIR -69 139 109 294 331 145 18 chr2 25063068 25063234 -225624620 - MER5A DNA MER1_type -2 187 1 1053 118 0 33 chr2 25063661 25063814 -225624040 + FRAM SINE Alu 4 151 -25 2175 102 0 31 chr2 25063822 25063967 -225623887 + AluSx SINE Alu 1 149 -163 2370 99 0 0 chr2 25063967 25064271 -225623583 + AluSx SINE Alu 1 304 -8 2175 102 0 31 chr2 25064271 25064447 -225623407 + AluSx SINE Alu 149 312 0 2200 102 0 16 chr2 25064715 25065019 -225622835 + AluSc SINE Alu 1 299 -10 417 185 68 34 chr2 25065097 25065243 -225622611 + L1MC4a LINE L1 5051 5201 -945 1425 157 99 4 chr2 25065761 25066023 -225621831 - AluJo SINE Alu -2 310 24 229 354 102 0 chr2 25066166 25066293 -225621561 + L2 LINE L2 3088 3227 -45 2216 121 0 0 chr2 25066943 25067250 -225620604 - AluSx SINE Alu -5 307 1 2345 60 17 0 chr2 25067273 25067572 -225620282 - AluY SINE Alu -7 304 1 345 357 21 7 chr2 25067750 25067893 -225619961 - MIR3 SINE MIR -34 174 30 2271 91 3 3 chr2 25068347 25068645 -225619209 + AluSx SINE Alu 1 298 -14 209 262 0 0 chr2 25068690 25068732 -225619122 + L2 LINE L2 3211 3252 -20 202 287 98 49 chr2 25069207 25069350 -225618504 + L2 LINE L2 3159 3308 -5 760 304 161 8 chr2 25069468 25069991 -225617863 + L1MC4a LINE L1 5344 5801 -363 1834 165 3 3 chr2 25070102 25070393 -225617461 + AluJo SINE Alu 1 291 -21 193 281 94 0 chr2 25070561 25070625 -225617229 - L2 LINE L2 -1 3271 3202 235 190 79 65 chr2 25070713 25070798 -225617056 - MIR SINE MIR -52 156 70 1889 140 7 23 chr2 25071852 25072152 -225615702 + AluSx SINE Alu 3 297 -15 198 324 0 67 chr2 25072160 25072265 -225615589 - L2 LINE L2 -173 3099 3002 216 185 62 77 chr2 25073034 25073099 -225614755 - MIR3 SINE MIR -2 206 143 31 0 0 0 chr2 25074671 25074702 -225613152 + GC_rich Low_complexity Low_complexity 1 31 0 2131 95 7 0 chr2 25074813 25075098 -225612756 + AluSg SINE Alu 24 310 0 2093 107 7 17 chr2 25077547 25077847 -225610007 + AluSx SINE Alu 1 297 -15 1191 87 6 46 chr2 25077847 25078020 -225609834 + AluSg/x SINE Alu 132 297 -13 225 0 0 0 chr2 25078495 25078520 -225609334 + (A)n Simple_repeat Simple_repeat 1 25 0 393 294 34 20 chr2 25080214 25080360 -225607494 - MIR SINE MIR -113 149 2 288 313 0 27 chr2 25081395 25081507 -225606347 + L2 LINE L2 2981 3089 -183 2424 69 0 3 chr2 25082430 25082734 -225605120 - AluSx SINE Alu -9 303 1 395 289 110 43 chr2 25082851 25083079 -225604775 - MIR SINE MIR -19 243 3 231 235 103 15 chr2 25084847 25084915 -225602939 + MIR SINE MIR 16 89 -119 236 311 164 33 chr2 25086036 25086280 -225601574 + L2 LINE L2 2992 3267 -5 330 373 47 26 chr2 25086304 25086497 -225601357 + L3b LINE CR1 1304 1500 -83 436 301 33 7 chr2 25086598 25086751 -225601103 - MIR SINE MIR -41 221 65 1117 60 0 0 chr2 25088970 25089103 -225598751 + AluSx SINE Alu 1 133 -179 444 99 0 14 chr2 25089107 25089178 -225598676 + MER51B LTR ERV1 212 281 -96 1256 132 0 0 chr2 25089187 25089377 -225598477 + AluSx SINE Alu 123 312 0 306 405 23 0 chr2 25089621 25089794 -225598060 - L3 LINE CR1 -342 1235 1059 1037 160 18 0 chr2 25090489 25090658 -225597196 - AluJb SINE Alu -14 298 127 1825 147 10 3 chr2 25090675 25090967 -225596887 - AluSx SINE Alu -18 294 1 188 405 41 0 chr2 25091102 25091223 -225596631 + L2 LINE L2 2956 3081 -191 341 250 16 73 chr2 25092693 25092817 -225595037 + MIR SINE MIR 96 212 -50 239 296 0 61 chr2 25092922 25093020 -225594834 - MER5C DNA MER1_type 0 324 233 186 236 91 0 chr2 25093110 25093165 -225594689 + MER5C DNA MER1_type 2 61 -263 2368 85 3 0 chr2 25094498 25094803 -225593051 - AluSx SINE Alu -6 306 1 334 264 46 0 chr2 25094859 25094946 -225592908 - MIR SINE MIR -99 163 73 405 340 62 6 chr2 25095064 25095226 -225592628 - MIR SINE MIR -72 190 20 194 357 188 0 chr2 25096528 25096640 -225591214 + MIR SINE MIR 18 150 -58 2301 109 0 0 chr2 25096642 25096954 -225590900 + AluSx SINE Alu 1 312 0 395 311 23 47 chr2 25097378 25097453 -225590401 - L1MC4 LINE L1 -153 7808 7733 914 121 0 0 chr2 25097453 25097577 -225590277 + FLAM_C SINE Alu 1 124 -9 395 311 23 47 chr2 25097577 25097773 -225590081 - L1MC4 LINE L1 -228 7733 6608 2154 103 10 10 chr2 25097983 25098293 -225589561 + AluY SINE Alu 2 311 0 279 139 0 0 chr2 25099924 25099967 -225587887 + MIR SINE MIR 106 148 -114 321 206 0 27 chr2 25100009 25100082 -225587772 + L2 LINE L2 3201 3271 -42 399 354 0 8 chr2 25100894 25101024 -225586830 + L3 LINE CR1 618 746 -831 32 43 0 0 chr2 25101456 25101502 -225586352 + GC_rich Low_complexity Low_complexity 1 46 0 482 270 44 19 chr2 25101899 25102058 -225585796 + L3 LINE CR1 1407 1569 -8 248 241 230 0 chr2 25102774 25102861 -225584993 + L2 LINE L2 3161 3267 -5 618 265 157 10 chr2 25103018 25103222 -225584632 - MIR SINE MIR 0 262 29 1846 160 0 10 chr2 25103235 25103542 -225584312 - AluJo SINE Alu -8 304 1 2247 100 3 0 chr2 25103591 25103891 -225583963 + AluSx SINE Alu 5 305 -7 415 114 14 0 chr2 25104296 25104366 -225583488 - MLT1I LTR MaLR -8 401 331 3321 123 37 78 chr2 25104366 25104497 -225583357 + L1MB3 LINE L1 5566 5701 -482 2278 105 0 0 chr2 25104497 25104803 -225583051 - AluSq SINE Alu -7 306 1 3321 123 37 78 chr2 25104803 25105258 -225582596 + L1MB3 LINE L1 5701 6173 -10 2345 74 0 0 chr2 25105258 25105556 -225582298 + AluY SINE Alu 1 298 -13 2190 111 0 0 chr2 25105559 25105856 -225581998 + AluSq SINE Alu 3 299 -14 2274 76 0 3 chr2 25105856 25106147 -225581707 + AluSc SINE Alu 1 290 -19 3321 123 37 78 chr2 25106147 25106198 -225581656 + L1MB3 LINE L1 6173 6183 0 253 214 36 150 chr2 25106230 25106370 -225581484 - MLT1I LTR MaLR -54 355 232 295 238 99 10 chr2 25106424 25106525 -225581329 - MLT1I LTR MaLR -299 110 1 304 276 32 77 chr2 25107128 25107284 -225580570 - MLT1K LTR MaLR -163 425 277 195 42 0 0 chr2 25107400 25107424 -225580430 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 245 296 12 0 chr2 25107463 25107544 -225580310 - MLT1K LTR MaLR -324 264 183 2257 97 0 3 chr2 25107738 25108047 -225579807 - AluSc SINE Alu -1 308 1 544 211 0 44 chr2 25108047 25108204 -225579650 + L1MB5 LINE L1 6040 6184 0 2447 229 90 57 chr2 25109093 25109351 -225578503 + L1MC4 LINE L1 6637 6885 -900 2393 142 31 68 chr2 25109351 25109686 -225578168 + MSTB1 LTR MaLR 5 322 -110 2184 126 7 0 chr2 25109686 25109996 -225577858 - AluSx SINE Alu 0 312 1 2393 142 31 68 chr2 25109996 25110104 -225577750 + MSTB1 LTR MaLR 322 432 0 2447 229 90 57 chr2 25110104 25110730 -225577124 + L1MC4 LINE L1 6885 7489 -296 2249 108 0 6 chr2 25110730 25111044 -225576810 + AluSx SINE Alu 1 312 0 2447 229 90 57 chr2 25111044 25111085 -225576769 + L1MC4 LINE L1 7489 7527 -258 2214 98 7 3 chr2 25111085 25111391 -225576463 + AluSc SINE Alu 3 309 0 2447 229 90 57 chr2 25111391 25111462 -225576392 + L1MC4 LINE L1 7527 7649 -136 260 164 0 0 chr2 25111478 25111533 -225576321 + L1MC4 LINE L1 7988 8042 0 * 673 246 175 4 chr2 25111531 25111799 -225576055 - L1MC/D LINE L1 -2230 5578 5265 1588 199 98 62 chr2 25112175 25112464 -225575390 - L1MD1 LINE L1 0 6242 5965 2410 74 0 16 chr2 25112464 25112776 -225575078 + AluY SINE Alu 1 307 -4 2147 128 0 3 chr2 25112785 25113098 -225574756 + AluSx SINE Alu 1 312 0 1588 199 98 62 chr2 25113098 25113317 -225574537 - L1MD1 LINE L1 -284 5958 5705 2217 87 0 45 chr2 25113589 25113900 -225573954 + AluSx SINE Alu 1 297 -15 1653 227 128 42 chr2 25114287 25114833 -225573021 - MLT1E LTR MaLR 0 593 1 1666 162 61 82 chr2 25115631 25116003 -225571851 + MSTA LTR MaLR 13 391 -37 2182 102 0 0 chr2 25116003 25116319 -225571535 - AluSx SINE Alu 0 316 1 2203 112 0 3 chr2 25116325 25116637 -225571217 - AluY SINE Alu 0 311 1 1666 162 61 82 chr2 25116637 25116681 -225571173 + MSTA LTR MaLR 396 428 0 1200 205 31 87 chr2 25116702 25116908 -225570946 + MLT1D LTR MaLR 1 176 -329 2247 106 3 0 chr2 25116908 25117211 -225570643 + AluSx SINE Alu 1 304 -8 1200 205 31 87 chr2 25117211 25117394 -225570460 + MLT1D LTR MaLR 176 368 -137 361 322 33 10 chr2 25117432 25117593 -225570261 + MIR3 SINE MIR 13 176 -78 201 311 68 10 chr2 25117759 25117862 -225569992 - MIR SINE MIR -57 151 43 201 308 22 33 chr2 25117915 25118006 -225569848 + MIR3 SINE MIR 5 94 -114 249 337 54 0 chr2 25118007 25118099 -225569755 + MIR SINE MIR 150 246 -16 2150 119 0 3 chr2 25118235 25118546 -225569308 - AluSg SINE Alu 0 310 1 185 277 234 0 chr2 25118563 25118657 -225569197 - MIR SINE MIR -65 143 28 1269 77 0 0 chr2 25119888 25120044 -225567810 + AluSp SINE Alu 129 284 -29 1570 147 10 34 chr2 25120101 25120393 -225567461 + AluSq SINE Alu 21 305 -8 182 325 26 61 chr2 25120558 25120672 -225567182 + MIR SINE MIR 36 145 -63 278 213 43 43 chr2 25120914 25121008 -225566846 + L1MC5 LINE L1 7832 7925 -36 2210 102 0 0 chr2 25121013 25121307 -225566547 - AluSx SINE Alu -18 294 1 1044 151 33 142 chr2 25121820 25122033 -225565821 - AluSg SINE Alu 0 300 136 2329 91 0 3 chr2 25122033 25122340 -225565514 - AluSq SINE Alu -7 306 1 1044 151 33 142 chr2 25122340 25122463 -225565391 - AluSg SINE Alu -164 136 1 515 312 214 18 chr2 25122724 25123393 -225564461 + L2 LINE L2 1804 2603 -711 703 310 190 18 chr2 25123394 25123867 -225563987 + L2 LINE L2 2731 3272 0 235 313 72 0 chr2 25124733 25124816 -225563038 - L2 LINE L2 -5 3308 3220 424 265 34 8 chr2 25125143 25125260 -225562594 + MIR3 SINE MIR 88 207 -1 259 284 197 8 chr2 25125360 25125487 -225562367 + MIR SINE MIR 105 255 -7 312 264 165 60 chr2 25126739 25126921 -225560933 - MIR3 SINE MIR -6 202 2 390 21 0 0 chr2 25127061 25127108 -225560746 + (CA)n Simple_repeat Simple_repeat 1 47 0 441 270 0 10 chr2 25127497 25127597 -225560257 + MIR SINE MIR 58 156 -106 2118 120 0 13 chr2 25127603 25127904 -225559950 + AluSx SINE Alu 1 297 -15 439 278 199 0 chr2 25127942 25128093 -225559761 - MER5A DNA MER1_type 0 189 9 2095 131 0 13 chr2 25128738 25129050 -225558804 - AluSx SINE Alu -4 308 1 291 85 0 0 chr2 25129352 25129399 -225558455 + (C)n Simple_repeat Simple_repeat 1 47 0 385 320 24 48 chr2 25129647 25129853 -225558001 + L2 LINE L2 3111 3311 -2 362 339 36 23 chr2 25130265 25130483 -225557371 + MIR SINE MIR 35 255 -7 181 284 156 28 chr2 25130649 25130758 -225557096 + MIR SINE MIR 136 258 -4 739 279 42 48 chr2 25131036 25131366 -225556488 - MER102b DNA MER1_type 0 341 14 2155 113 7 0 chr2 25132140 25132442 -225555412 + AluSx SINE Alu 1 304 -8 219 342 18 11 chr2 25132938 25133073 -225554781 - MIR SINE MIR -72 136 2 199 277 17 6 chr2 25133277 25133342 -225554512 + MIR SINE MIR 93 159 -49 302 266 51 0 chr2 25133369 25133423 -225554431 - L1ME4a LINE L1 0 6121 6060 2078 119 26 26 chr2 25133423 25133734 -225554120 + AluSx SINE Alu 1 311 -1 302 266 51 0 chr2 25133734 25133758 -225554096 - L1ME4a LINE L1 -61 6060 6039 431 293 223 0 chr2 25133936 25134236 -225553618 - L1MC4a LINE L1 -1878 5930 5564 189 0 0 0 chr2 25134412 25134433 -225553421 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 183 314 16 91 chr2 25135955 25136076 -225551778 + L2 LINE L2 3186 3297 -16 931 161 50 55 chr2 25136632 25136850 -225551004 + MER20 DNA MER1_type 3 219 0 2153 109 7 3 chr2 25136898 25137192 -225550662 - AluSq SINE Alu -18 295 1 752 175 131 8 chr2 25137222 25137454 -225550400 - L1MB3 LINE L1 -7 6173 5915 2301 68 17 0 chr2 25137689 25137982 -225549872 - AluSx SINE Alu -14 298 1 1024 194 18 127 chr2 25138547 25138887 -225548967 - AluJo SINE Alu -9 303 1 1835 109 3 25 chr2 25138903 25139186 -225548668 - AluSx SINE Alu -12 300 24 323 287 171 8 chr2 25139320 25139449 -225548405 + MIR SINE MIR 103 252 -10 247 339 173 36 chr2 25139829 25140136 -225547718 + L2 LINE L2 2911 3259 -13 289 303 31 71 chr2 25140537 25140755 -225547099 - MIR3 SINE MIR -50 212 3 183 267 89 33 chr2 25141520 25141610 -225546244 + L2 LINE L2 3162 3256 -16 249 159 23 0 chr2 25142075 25142119 -225545735 + MIR SINE MIR 105 149 -113 641 199 64 21 chr2 25142373 25142514 -225545340 - AluSx SINE Alu -159 153 7 2194 115 3 0 chr2 25142522 25142827 -225545027 - AluSq SINE Alu -7 306 1 348 127 0 0 chr2 25143222 25143277 -225544577 + (TAGG)n Simple_repeat Simple_repeat 4 58 0 333 68 0 0 chr2 25144028 25144072 -225543782 + (CA)n Simple_repeat Simple_repeat 1 44 0 274 274 21 32 chr2 25144327 25144422 -225543432 + GA-rich Low_complexity Low_complexity 2 95 0 640 265 32 60 chr2 25144650 25144834 -225543020 + MIR SINE MIR 20 197 -65 2191 71 14 20 chr2 25144834 25145131 -225542723 + AluY SINE Alu 1 295 -16 640 265 32 60 chr2 25145131 25145195 -225542659 + MIR SINE MIR 197 261 -1 204 313 94 10 chr2 25145705 25145801 -225542053 - L2 LINE L2 -1 3312 3209 732 201 103 17 chr2 25145832 25146006 -225541848 - MER5A DNA MER1_type 0 189 1 203 130 0 22 chr2 25146172 25146218 -225541636 + (CGGGGG)n Simple_repeat Simple_repeat 2 46 0 406 298 71 61 chr2 25146769 25146967 -225540887 - MIR SINE MIR -57 205 6 194 209 77 0 chr2 25147681 25147745 -225540109 + MIR SINE MIR 116 185 -77 249 346 10 10 chr2 25148580 25148681 -225539173 - MIR SINE MIR -76 132 32 220 295 338 0 chr2 25148732 25148871 -225538983 + MIR SINE MIR 6 191 -71 197 298 0 0 chr2 25151041 25151088 -225536766 + MIR3 SINE MIR 109 155 -53 455 293 221 49 chr2 25152057 25152110 -225535744 + HAL1 LINE L1 24 67 -2440 1695 161 7 20 chr2 25152110 25152415 -225535439 - AluJo SINE Alu -11 301 1 455 293 221 49 chr2 25152415 25152785 -225535069 + HAL1 LINE L1 67 372 -2135 2288 83 7 0 chr2 25152785 25153087 -225534767 - AluSp SINE Alu -9 304 1 455 293 221 49 chr2 25153087 25153331 -225534523 + HAL1 LINE L1 372 807 -1700 2150 115 3 0 chr2 25153334 25153639 -225534215 - AluSx SINE Alu -6 306 1 325 230 225 50 chr2 25153667 25153740 -225534114 + HAL1 LINE L1 1567 1626 -881 2381 87 0 6 chr2 25153740 25154052 -225533802 - AluY SINE Alu -1 310 1 2441 78 0 0 chr2 25154056 25154365 -225533489 - AluY SINE Alu 0 311 3 982 103 0 22 chr2 25154367 25154503 -225533351 - AluJo/FLAM SINE Alu -169 133 1 325 230 225 50 chr2 25154503 25154643 -225533211 + HAL1 LINE L1 1628 1827 -680 2215 119 0 0 chr2 25154812 25155123 -225532731 - AluSx SINE Alu -1 311 1 583 243 61 120 chr2 25155156 25155424 -225532430 + HAL1 LINE L1 1697 1922 -585 1031 117 0 0 chr2 25155424 25155569 -225532285 + L1MA6 LINE L1 6156 6300 0 583 243 61 120 chr2 25155569 25155807 -225532047 + HAL1 LINE L1 1922 2173 -334 198 167 0 0 chr2 25155810 25155846 -225532008 + (TATG)n Simple_repeat Simple_repeat 3 38 0 2066 149 18 59 chr2 25155867 25155903 -225531951 - MLT1D LTR MaLR -32 473 437 2338 71 0 3 chr2 25155903 25156198 -225531656 + AluSp SINE Alu 1 294 -19 2066 149 18 59 chr2 25156198 25156652 -225531202 - MLT1D LTR MaLR -68 437 3 1590 178 56 0 chr2 25156672 25156959 -225530895 + AluJo SINE Alu 1 303 -9 661 245 68 13 chr2 25157040 25157277 -225530577 + HAL1 LINE L1 2258 2507 0 180 227 227 0 chr2 25157350 25157416 -225530438 + MIR3 SINE MIR 117 197 -11 382 260 156 12 chr2 25158153 25158326 -225529528 + MLT1K LTR MaLR 211 408 -180 625 293 80 5 chr2 25158499 25158711 -225529143 + MIR SINE MIR 35 262 0 738 217 6 44 chr2 25158803 25159009 -225528845 - MIR SINE MIR -18 244 46 748 246 62 9 chr2 25159249 25159460 -225528394 - MIR SINE MIR -13 249 28 1187 308 26 45 chr2 25160590 25161145 -225526709 + ERVL LTR ERVL 4813 5399 -153 410 0 20 0 chr2 25161161 25161211 -225526643 + (TG)n Simple_repeat Simple_repeat 2 52 0 1875 212 55 130 chr2 25161519 25162355 -225525499 + LTR41 LTR ERVL 1 773 0 459 75 62 0 chr2 25163182 25163262 -225524592 + L1MB8 LINE L1 6089 6173 -5 412 266 167 26 chr2 25163965 25164157 -225523697 - MIR SINE MIR -43 219 1 547 159 29 72 chr2 25165701 25165839 -225522015 + AluJ SINE Alu 2 133 -169 2052 108 0 0 chr2 25165859 25166118 -225521736 + AluSg SINE Alu 1 259 -51 1096 182 0 30 chr2 25166187 25166385 -225521469 + AluJ SINE Alu 120 311 -1 2322 110 0 0 chr2 25166920 25167219 -225520635 - AluSx SINE Alu -13 299 1 517 275 39 11 chr2 25167430 25167608 -225520246 - Charlie8 DNA MER1_type -2198 219 37 493 154 0 0 chr2 25168146 25168224 -225519630 - AluS SINE Alu -13 297 220 2059 92 0 8 chr2 25168227 25168488 -225519366 - AluSq SINE Alu -54 259 1 4403 108 46 42 chr2 25170187 25170963 -225516891 + MER4E LTR ERV1 1 779 0 261 0 0 0 chr2 25171516 25171545 -225516309 + (T)n Simple_repeat Simple_repeat 1 29 0 876 222 11 0 chr2 25175099 25175284 -225512570 + MER5A DNA MER1_type 3 189 0 23 33 0 0 chr2 25176700 25176730 -225511124 + GC_rich Low_complexity Low_complexity 1 30 0 183 205 0 0 chr2 25181016 25181055 -225506799 + (TG)n Simple_repeat Simple_repeat 2 40 0 2022 153 14 0 chr2 25181212 25181506 -225506348 - AluJo SINE Alu -14 298 1 337 207 155 9 chr2 25182110 25182226 -225505628 - L2 LINE L2 -19 3294 3162 350 253 124 67 chr2 25182283 25182351 -225505503 + MIR SINE MIR 2 65 -197 2466 94 0 0 chr2 25182351 25182660 -225505194 - AluSx SINE Alu -3 309 1 350 253 124 67 chr2 25182660 25182785 -225505069 + MIR SINE MIR 65 206 -56 2320 96 6 16 chr2 25183036 25183350 -225504504 - AluSq SINE Alu -2 311 1 1011 325 59 28 chr2 25184039 25184697 -225503157 + L3 LINE CR1 809 1554 -23 2344 111 7 0 chr2 25184698 25185005 -225502849 - AluSx SINE Alu 0 312 4 369 303 65 7 chr2 25185414 25185569 -225502285 + MIR3 SINE MIR 40 203 -5 249 33 0 0 chr2 25188632 25188662 -225499192 + (TG)n Simple_repeat Simple_repeat 2 31 0 2034 132 3 3 chr2 25188685 25188974 -225498880 - AluSx SINE Alu -23 289 1 199 264 121 11 chr2 25188976 25189067 -225498787 - MIR SINE MIR -103 159 59 384 22 0 0 chr2 25189672 25189717 -225498137 + (TG)n Simple_repeat Simple_repeat 2 46 0 229 150 67 0 chr2 25190123 25190183 -225497671 + L1M4 LINE L1 4987 5050 -1096 2120 137 3 13 chr2 25190259 25190574 -225497280 - AluSx SINE Alu 0 312 1 1633 176 35 14 chr2 25190608 25190723 -225497131 + L1M4 LINE L1 4973 5084 -1090 2563 67 0 0 chr2 25190723 25191023 -225496831 - AluY SINE Alu -11 300 1 1633 176 35 14 chr2 25191023 25191486 -225496368 + L1M4 LINE L1 5084 5557 -617 * 11433 178 19 4 chr2 25191484 25191954 -225495900 + L1PB1 LINE L1 2722 3183 -2968 2279 91 0 3 chr2 25191954 25192240 -225495614 + AluSx SINE Alu 1 285 -27 300 53 0 0 chr2 25192240 25192278 -225495576 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 11433 178 19 4 chr2 25192278 25193469 -225494385 + L1PB1 LINE L1 3183 4354 -1797 234 0 0 0 chr2 25193469 25193495 -225494359 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 11433 178 19 4 chr2 25193495 25195214 -225492640 + L1PB1 LINE L1 4354 6151 0 243 200 12 38 chr2 25195232 25195312 -225492542 + (TA)n Simple_repeat Simple_repeat 1 78 0 339 279 58 10 chr2 25195328 25195432 -225492422 + L1MC4 LINE L1 6603 6711 -1331 1957 75 4 0 chr2 25195808 25196075 -225491779 + L1PB1 LINE L1 5706 5973 -178 2081 131 0 3 chr2 25196075 25196365 -225491489 + AluSx SINE Alu 21 309 -3 1104 154 0 0 chr2 25196365 25196527 -225491327 + AluSg/x SINE Alu 132 293 -17 258 81 0 0 chr2 25197143 25197180 -225490674 + (CA)n Simple_repeat Simple_repeat 1 37 0 2586 59 0 7 chr2 25197212 25197518 -225490336 - AluY SINE Alu -7 304 1 655 289 157 32 chr2 25197771 25198001 -225489853 + L2 LINE L2 2243 2443 -870 2330 110 0 3 chr2 25198001 25198309 -225489545 - AluSx SINE Alu -5 307 1 655 289 157 32 chr2 25198309 25198510 -225489344 + L2 LINE L2 2443 2617 -696 954 54 78 0 chr2 25198510 25198639 -225489215 + MER85 DNA T2_type 1 139 0 655 289 157 32 chr2 25198639 25198662 -225489192 + L2 LINE L2 2617 2636 -677 1974 166 0 0 chr2 25198662 25198963 -225488891 + AluJb SINE Alu 3 303 -9 655 289 157 32 chr2 25198963 25199231 -225488623 + L2 LINE L2 2636 3072 -241 535 147 21 0 chr2 25199231 25199326 -225488528 - AluJ SINE Alu -5 307 211 896 99 20 80 chr2 25199326 25199477 -225488377 - AluJ SINE Alu -170 142 1 330 275 88 39 chr2 25199488 25199670 -225488184 + L2 LINE L2 3089 3279 -34 202 240 308 0 chr2 25199696 25199800 -225488054 - MIR SINE MIR -4 258 123 184 250 163 0 chr2 25200029 25200121 -225487733 + MIR3 SINE MIR 4 110 -98 320 261 98 26 chr2 25200451 25200604 -225487250 + L2 LINE L2 3084 3247 -66 1909 152 14 0 chr2 25200867 25201163 -225486691 - AluJb SINE Alu -12 300 1 342 246 109 18 chr2 25201247 25201357 -225486497 - MIR SINE MIR -49 213 94 338 248 55 83 chr2 25201582 25201836 -225486018 - L1ME4a LINE L1 -58 6063 5817 944 202 13 70 chr2 25201845 25202073 -225485781 - AluJo SINE Alu -15 297 83 2443 95 0 0 chr2 25202085 25202390 -225485464 - AluSq SINE Alu -8 305 1 266 241 23 23 chr2 25202390 25202477 -225485377 - L1ME4a LINE L1 -292 5829 5743 1120 135 0 27 chr2 25202512 25202697 -225485157 - AluJb SINE Alu -1 311 132 1530 66 6 0 chr2 25202717 25202900 -225484954 + AluSp SINE Alu 1 184 -129 300 53 0 0 chr2 25203021 25203059 -225484795 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 9795 170 19 0 chr2 25203059 25204250 -225483604 + L1PB1 LINE L1 3193 4361 -1790 234 0 0 0 chr2 25204250 25204276 -225483578 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 9795 170 19 0 chr2 25204276 25205995 -225481859 + L1PB1 LINE L1 4361 6151 0 243 200 12 38 chr2 25206013 25206093 -225481761 + (TA)n Simple_repeat Simple_repeat 1 78 0 339 279 58 10 chr2 25206109 25206213 -225481641 + L1MC4 LINE L1 6603 6711 -1331 3016 71 9 43 chr2 25206590 25206857 -225480997 + L1PB1 LINE L1 5706 5952 -199 2073 135 0 0 chr2 25206857 25207139 -225480715 + AluSx SINE Alu 21 302 -10 3016 71 9 43 chr2 25207139 25207333 -225480521 + L1PB1 LINE L1 5952 6151 0 207 0 0 0 chr2 25207340 25207363 -225480491 + (A)n Simple_repeat Simple_repeat 1 23 0 716 151 16 8 chr2 25207671 25207829 -225480025 + L1MB8 LINE L1 5595 5748 -416 926 153 0 0 chr2 25207829 25207973 -225479881 + AluSg/x SINE Alu 164 307 -3 570 191 9 9 chr2 25207996 25208111 -225479743 + L1MB8 LINE L1 5875 5989 -189 2380 101 7 0 chr2 25208206 25208513 -225479341 + AluSx SINE Alu 1 309 -3 185 220 20 40 chr2 25209499 25209549 -225478305 + L2 LINE L2 3264 3312 -1 2317 82 7 14 chr2 25209666 25209958 -225477896 - AluSc SINE Alu -19 290 1 1933 146 24 0 chr2 25209958 25210246 -225477608 - AluSx SINE Alu -17 295 1 347 189 68 10 chr2 25210290 25210404 -225477450 + MLT1F1 LTR MaLR 1 116 -451 330 241 125 9 chr2 25211644 25211756 -225476098 - MIR3 SINE MIR -49 159 35 192 219 0 0 chr2 25212167 25212208 -225475646 + L2 LINE L2 3255 3295 -18 2340 89 0 0 chr2 25213732 25214023 -225473831 - AluSx SINE Alu -21 291 1 668 183 48 81 chr2 25214358 25214405 -225473449 + MIR SINE MIR 5 52 -210 762 181 0 0 chr2 25214405 25214538 -225473316 - FLAM_A SINE Alu 0 133 1 668 183 48 81 chr2 25214538 25214676 -225473178 + MIR SINE MIR 52 184 -78 2373 95 0 0 chr2 25215180 25215476 -225472378 + AluSq SINE Alu 1 296 -17 1735 158 54 30 chr2 25215538 25215835 -225472019 - AluJb SINE Alu -8 304 1 2091 114 7 0 chr2 25215866 25216166 -225471688 + AluSx SINE Alu 1 302 0 438 196 131 19 chr2 25216220 25216373 -225471481 + MER58 DNA MER1_type 50 2420 0 319 242 16 0 chr2 25216876 25216938 -225470916 + MER20 DNA MER1_type 79 141 -78 1825 60 0 14 chr2 25216941 25217159 -225470695 + AluSp SINE Alu 86 300 -13 284 97 0 161 chr2 25217159 25217221 -225470633 + AluSg/x SINE Alu 76 127 -173 242 312 0 13 chr2 25217230 25217307 -225470547 + MER20 DNA MER1_type 138 213 -6 29 47 0 0 chr2 25217591 25217634 -225470220 + AT_rich Low_complexity Low_complexity 1 43 0 5605 118 11 4 chr2 25217716 25218539 -225469315 + L1PB3 LINE L1 5326 6154 0 385 148 0 0 chr2 25218575 25218629 -225469225 + AluSx SINE Alu 32 85 -217 2293 104 0 10 chr2 25218630 25218928 -225468926 + AluSp SINE Alu 1 295 -18 1665 111 0 37 chr2 25218928 25219170 -225468684 + AluSx SINE Alu 71 305 -5 330 26 0 0 chr2 25219834 25219873 -225467981 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 282 376 43 25 chr2 25220410 25220692 -225467162 + L2 LINE L2 2198 2484 -830 629 242 27 0 chr2 25221042 25221191 -225466663 + LTR23-int LTR ERV1 4971 5123 0 1257 172 26 4 chr2 25221192 25221424 -225466430 + LTR23 LTR ERV1 1 237 -200 328 114 0 0 chr2 25221442 25221486 -225466368 - MER4E LTR ERV1 -70 696 653 956 129 17 39 chr2 25221487 25221665 -225466189 + LTR23 LTR ERV1 226 399 -38 2368 105 0 0 chr2 25221683 25221989 -225465865 + AluSq SINE Alu 1 306 -7 7504 34 14 0 chr2 25223877 25224855 -225462999 - L1PA5 LINE L1 -3 6151 5183 2316 88 7 7 chr2 25224855 25225160 -225462694 - AluY SINE Alu -6 305 1 361 275 22 0 chr2 25225340 25225431 -225462423 - L2 LINE L2 -6 3266 3174 1231 174 11 76 chr2 25225786 25225848 -225462006 + MER21B LTR ERV1 1 65 -798 1762 95 0 0 chr2 25225848 25226069 -225461785 - AluSg/x SINE Alu -7 305 85 1231 174 11 76 chr2 25226069 25226270 -225461584 + MER21B LTR ERV1 65 247 -616 345 256 56 24 chr2 25226371 25226496 -225461358 + L1MEc LINE L1 931 1059 -5662 1503 266 61 35 chr2 25226508 25227240 -225460614 + L1MEc LINE L1 1666 2463 -4258 1105 275 8 5 chr2 25227245 25227619 -225460235 + L1MEc LINE L1 2687 3061 -3479 229 154 0 0 chr2 25227700 25227739 -225460115 + L1MEc LINE L1 3077 3115 -3425 1944 110 53 7 chr2 25228193 25228475 -225459379 - AluSg SINE Alu -15 295 1 261 358 50 27 chr2 25228966 25229187 -225458667 + MIR SINE MIR 18 243 -19 542 147 63 11 chr2 25229407 25229502 -225458352 - THE1C LTR MaLR -275 100 1 397 336 83 6 chr2 25229520 25229871 -225457983 - L1ME LINE L1 -365 5756 5379 295 324 87 0 chr2 25229899 25230072 -225457782 - MIR SINE MIR -13 249 62 203 354 135 0 chr2 25230922 25231018 -225456836 + L2 LINE L2 3155 3263 -9 884 164 77 72 chr2 25231999 25232207 -225455647 + MER58A DNA MER1_type 1 209 -15 1703 179 16 35 chr2 25232388 25232706 -225455148 + AluJo SINE Alu 1 312 0 2038 124 0 41 chr2 25233316 25233630 -225454224 + AluSx SINE Alu 1 301 -11 2241 121 0 10 chr2 25234341 25234648 -225453206 + AluSx SINE Alu 1 304 -8 2449 234 42 28 chr2 25235020 25235671 -225452183 + MER21B LTR ERV1 156 815 -48 2164 110 20 0 chr2 25235839 25236131 -225451723 + AluSx SINE Alu 1 298 -14 561 15 0 0 chr2 25236233 25236299 -225451555 + (GGAA)n Simple_repeat Simple_repeat 1 66 0 22 0 0 0 chr2 25236897 25236919 -225450935 + AT_rich Low_complexity Low_complexity 1 22 0 650 215 12 1 chr2 25237313 25237461 -225450393 + MLT1I LTR MaLR 18 166 -243 209 206 0 63 chr2 25237696 25237759 -225450095 + CT-rich Low_complexity Low_complexity 2 60 0 2424 85 0 0 chr2 25237868 25238162 -225449692 + AluSg SINE Alu 1 294 -16 287 213 111 46 chr2 25239208 25239316 -225448538 - MIR3 SINE MIR -23 185 71 662 215 79 17 chr2 25239417 25239594 -225448260 + MER5A DNA MER1_type 2 189 0 1968 125 63 33 chr2 25239982 25240797 -225447057 + SVA Other Other 458 868 -518 5907 107 35 36 chr2 25240829 25241785 -225446069 + SVA Other Other 432 1386 0 288 70 0 0 chr2 25241805 25241848 -225446006 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 189 0 0 0 chr2 25242433 25242454 -225445400 + (TTTTC)n Simple_repeat Simple_repeat 5 25 0 1521 160 4 15 chr2 25242454 25242716 -225445138 - AluJb SINE Alu -48 264 6 2173 112 31 0 chr2 25243192 25243486 -225444368 - AluSx SINE Alu -9 303 1 251 196 20 0 chr2 25244043 25244094 -225443760 + U5 snRNA snRNA 1 52 -64 260 211 110 55 chr2 25244342 25244451 -225443403 - MIR3 SINE MIR -23 185 71 658 220 79 17 chr2 25244552 25244729 -225443125 + MER5A DNA MER1_type 2 189 0 234 0 0 0 chr2 25244847 25244873 -225442981 + (T)n Simple_repeat Simple_repeat 1 26 0 564 42 0 0 chr2 25245048 25245119 -225442735 + (TCTA)n Simple_repeat Simple_repeat 3 73 0 1463 137 133 4 chr2 25245119 25245367 -225442487 - AluJb SINE Alu -32 280 1 2205 113 27 0 chr2 25246984 25247284 -225440570 - AluSx SINE Alu -4 308 1 1163 136 35 0 chr2 25247468 25247637 -225440217 - AluSx SINE Alu -137 175 1 192 40 0 0 chr2 25247966 25247991 -225439863 + (CCA)n Simple_repeat Simple_repeat 1 25 0 524 133 22 33 chr2 25248615 25248705 -225439149 + FRAM SINE Alu 20 108 -68 1284 144 20 0 chr2 25248829 25249024 -225438830 + MLT2B3 LTR ERVL 1 199 -355 425 303 15 0 chr2 25249028 25249160 -225438694 - L1ME3A LINE L1 -328 5842 5709 1071 215 26 32 chr2 25249163 25249476 -225438378 + MLT2B2 LTR ERVL 258 515 0 1847 134 0 17 chr2 25249569 25249859 -225437995 + AluSx SINE Alu 1 285 -27 396 0 0 0 chr2 25249859 25249903 -225437951 + (CA)n Simple_repeat Simple_repeat 2 45 0 310 314 115 19 chr2 25250353 25250509 -225437345 + MIR SINE MIR 26 196 -66 206 157 0 20 chr2 25250852 25250903 -225436951 + (TCTCTG)n Simple_repeat Simple_repeat 1 50 0 2330 93 3 3 chr2 25251110 25251411 -225436443 - AluSx SINE Alu -11 301 1 289 329 145 7 chr2 25251427 25251605 -225436249 + MIR SINE MIR 14 211 -51 1204 254 35 0 chr2 25251714 25252025 -225435829 + MER33 DNA MER1_type 1 322 -2 228 205 60 0 chr2 25252774 25252857 -225434997 + (TA)n Simple_repeat Simple_repeat 2 89 0 245 287 140 0 chr2 25253749 25253885 -225433969 - L1M4 LINE L1 -956 5190 5036 1089 56 0 0 chr2 25253885 25254010 -225433844 - AluSp/q SINE Alu -17 296 172 232 267 107 20 chr2 25254010 25254160 -225433694 - L1P LINE L1 -1102 5044 4882 342 0 0 0 chr2 25254886 25254924 -225432930 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr2 25256197 25256219 -225431635 + AT_rich Low_complexity Low_complexity 1 22 0 2602 199 83 21 chr2 25256760 25257081 -225430773 - L1ME1 LINE L1 -6 6160 5860 826 155 75 43 chr2 25257081 25257242 -225430612 - FRAM SINE Alu 0 166 1 2602 199 83 21 chr2 25257242 25257574 -225430280 - L1ME1 LINE L1 -306 5860 5467 3547 156 160 19 chr2 25257636 25257703 -225430151 - L1MB7 LINE L1 0 6184 6128 2071 141 3 3 chr2 25257703 25258000 -225429854 - AluSx SINE Alu -15 297 1 3547 156 160 19 chr2 25258000 25258684 -225429170 - L1MB7 LINE L1 -56 6128 5326 2159 127 3 0 chr2 25258738 25259037 -225428817 + AluSg SINE Alu 4 303 -7 458 247 167 41 chr2 25259367 25259634 -225428220 - L2 LINE L2 -176 3137 2802 1416 93 132 10 chr2 25259634 25259728 -225428126 + MER30 DNA MER1_type 1 82 -148 198 71 0 0 chr2 25259728 25259756 -225428098 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1416 93 132 10 chr2 25259756 25259866 -225427988 + MER30 DNA MER1_type 82 230 0 458 247 167 41 chr2 25259866 25259987 -225427867 - L2 LINE L2 -511 2802 2698 455 209 0 0 chr2 25259994 25260085 -225427769 + L1MC3 LINE L1 7005 7095 -690 274 233 14 14 chr2 25260088 25260161 -225427693 + MLT1F1 LTR MaLR 36 108 -459 2323 129 73 5 chr2 25260161 25260557 -225427297 + L1MC3 LINE L1 7172 7594 -191 906 145 25 60 chr2 25260557 25260662 -225427192 + L1MC2 LINE L1 6137 6233 -111 1863 123 7 11 chr2 25260662 25260939 -225426915 + AluJb SINE Alu 11 286 -26 906 145 25 60 chr2 25260939 25261033 -225426821 + L1MC2 LINE L1 6233 6329 -15 209 333 0 0 chr2 25261039 25261111 -225426743 - L2 LINE L2 -615 2699 2628 * 337 262 170 2 chr2 25261076 25261253 -225426601 + MIR SINE MIR 16 222 -40 263 229 100 43 chr2 25262121 25262261 -225425593 - L1MC5 LINE L1 -53 7908 7761 697 260 18 18 chr2 25263784 25263953 -225423901 + MER5B DNA MER1_type 1 169 -9 392 350 85 5 chr2 25264189 25264389 -225423465 + MIR SINE MIR 47 262 0 377 288 31 50 chr2 25265124 25265303 -225422551 - MER5A DNA MER1_type 0 189 2 2355 81 0 19 chr2 25265680 25265989 -225421865 + AluSx SINE Alu 1 303 -9 223 278 158 62 chr2 25267007 25267216 -225420638 + L2 LINE L2 2809 3037 -235 469 269 60 81 chr2 25267283 25267493 -225420361 + MIR SINE MIR 34 260 -2 1821 139 3 70 chr2 25267673 25267989 -225419865 - AluJo SINE Alu -17 295 1 934 265 84 31 chr2 25268031 25268641 -225419213 - L1MEd LINE L1 -4723 1406 763 659 307 105 43 chr2 25268654 25268933 -225418921 - L1MEd LINE L1 -5427 692 381 2348 91 0 16 chr2 25268933 25269242 -225418612 - AluSx SINE Alu -8 304 1 659 307 105 43 chr2 25269242 25269353 -225418501 - L1MEd LINE L1 -5738 381 278 405 279 34 131 chr2 25269477 25269714 -225418140 + L2 LINE L2 2994 3207 -65 2587 50 0 7 chr2 25269828 25270128 -225417726 + AluY SINE Alu 4 301 -10 4637 210 83 20 chr2 25270144 25271009 -225416845 - L1ME2 LINE L1 -67 6097 5288 1966 97 8 0 chr2 25271009 25271267 -225416587 - AluY SINE Alu -4 307 48 4637 210 83 20 chr2 25271267 25272061 -225415793 - L1ME2 LINE L1 -876 5288 4278 1802 138 0 11 chr2 25272061 25272336 -225415518 - AluJb SINE Alu -17 295 24 4637 210 83 20 chr2 25272336 25272670 -225415184 - L1ME2 LINE L1 -1886 4278 3967 22 35 0 0 chr2 25274287 25274316 -225413538 + AT_rich Low_complexity Low_complexity 1 29 0 2335 97 0 10 chr2 25275118 25275427 -225412427 + AluY SINE Alu 1 306 -5 22 0 0 0 chr2 25276837 25276859 -225410995 + AT_rich Low_complexity Low_complexity 1 22 0 390 262 99 73 chr2 25277376 25277788 -225410066 - L1MC5 LINE L1 -27 7934 7512 2267 98 19 3 chr2 25277813 25278120 -225409734 - AluSx SINE Alu 0 312 1 1061 245 30 30 chr2 25278137 25278255 -225409599 - L1MC4a LINE L1 -898 6910 6793 2407 98 0 0 chr2 25278255 25278562 -225409292 - AluSx SINE Alu -5 307 1 1061 245 30 30 chr2 25278562 25278745 -225409109 - L1MC4a LINE L1 -1014 6794 6609 3574 107 11 52 chr2 25278824 25279099 -225408755 + MER75 DNA T2_type 2 246 -268 2254 98 0 3 chr2 25279099 25279385 -225408469 - AluSc SINE Alu -24 285 1 3574 107 11 52 chr2 25279385 25279644 -225408210 + MER75 DNA T2_type 246 514 0 1420 154 0 26 chr2 25279732 25279888 -225407966 - AluJb SINE Alu -23 289 131 225 0 0 0 chr2 25279888 25279913 -225407941 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2282 78 0 3 chr2 25279913 25280197 -225407657 - AluY SINE Alu -28 283 1 1420 154 0 26 chr2 25280197 25280272 -225407582 - AluJb SINE Alu -179 133 63 541 233 204 61 chr2 25280278 25280671 -225407183 - L1MDa LINE L1 -4785 1755 1320 2587 310 68 24 chr2 25280671 25280739 -225407115 - L2 LINE L2 -513 2801 2737 2296 117 0 0 chr2 25280739 25281046 -225406808 - AluSx SINE Alu -5 307 1 2587 310 68 24 chr2 25281046 25281078 -225406776 - L2 LINE L2 -577 2737 2708 907 110 0 16 chr2 25281078 25281205 -225406649 + FLAM_C SINE Alu 1 125 -8 2587 310 68 24 chr2 25281205 25282147 -225405707 - L2 LINE L2 -606 2708 1712 2219 107 0 19 chr2 25282148 25282456 -225405398 - AluSx SINE Alu -10 302 1 213 143 71 0 chr2 25282674 25282716 -225405138 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 209 249 121 91 chr2 25282898 25283063 -225404791 - L2 LINE L2 -23 3290 3121 289 291 27 27 chr2 25283345 25283455 -225404399 - MER5A DNA MER1_type -72 117 8 325 184 154 110 chr2 25283741 25283877 -225403977 + MIR SINE MIR 91 232 -30 2702 17 0 0 chr2 25283961 25284255 -225403599 - AluYa5 SINE Alu -17 294 1 1103 271 91 33 chr2 25284284 25284737 -225403117 + L2 LINE L2 2220 2698 -616 876 154 0 7 chr2 25284742 25284885 -225402969 + L1MB8 LINE L1 6037 6178 0 2449 174 191 104 chr2 25284904 25285150 -225402704 + L1MC3 LINE L1 6137 6360 -657 2000 116 3 29 chr2 25285150 25285461 -225402393 - AluSx SINE Alu -9 303 1 2449 174 191 104 chr2 25285461 25285805 -225402049 + L1MC3 LINE L1 6360 6672 -345 264 284 39 59 chr2 25285805 25285907 -225401947 + MLT1F1 LTR MaLR 35 134 -433 2449 174 191 104 chr2 25285907 25286346 -225401508 + L1MC3 LINE L1 6672 6925 -92 2491 73 0 6 chr2 25286346 25286659 -225401195 + AluY SINE Alu 1 311 0 2449 174 191 104 chr2 25286659 25286761 -225401093 + L1MC3 LINE L1 6925 7017 0 1336 302 70 16 chr2 25286777 25287261 -225400593 + L2 LINE L2 2804 3313 0 2169 111 10 10 chr2 25287306 25287612 -225400242 + AluSx SINE Alu 1 306 -6 224 286 0 29 chr2 25287648 25287718 -225400136 - MIR SINE MIR -124 84 17 1924 123 0 0 chr2 25288427 25288687 -225399167 - AluSx SINE Alu -52 260 1 499 296 64 20 chr2 25288698 25288948 -225398906 - L1MEd LINE L1 -4943 1176 916 403 337 111 23 chr2 25289509 25289770 -225398084 - L1MEd LINE L1 -4946 1173 890 24 32 0 0 chr2 25290538 25290569 -225397285 + AT_rich Low_complexity Low_complexity 1 31 0 2556 7 0 0 chr2 25290582 25290856 -225396998 - AluYb8 SINE Alu -5 313 40 748 130 0 0 chr2 25290863 25290963 -225396891 - FLAM_A SINE Alu -18 124 25 180 353 130 55 chr2 25291426 25291772 -225396082 - L2 LINE L2 -92 3180 2809 544 187 97 58 chr2 25291829 25291889 -225395965 - MER3 DNA MER1_type -17 192 136 2092 133 0 7 chr2 25291889 25292190 -225395664 + AluSq SINE Alu 1 299 -14 544 187 97 58 chr2 25292190 25292284 -225395570 - MER3 DNA MER1_type -73 136 32 254 308 42 50 chr2 25292309 25292429 -225395425 - L2 LINE L2 -560 2754 2636 255 265 15 0 chr2 25293140 25293208 -225394646 + L2 LINE L2 2323 2391 -923 16494 119 21 14 chr2 25293936 25295358 -225392496 + Tigger1 DNA MER2_type 1 1450 -968 2173 107 20 3 chr2 25295358 25295656 -225392198 - AluSq SINE Alu -10 303 1 16494 119 21 14 chr2 25295656 25296633 -225391221 + Tigger1 DNA MER2_type 1450 2418 0 643 237 28 47 chr2 25297160 25297371 -225390483 - HAL1 LINE L1 -2256 251 45 961 122 7 0 chr2 25297812 25297951 -225389903 - FAM SINE Alu -5 44 1 461 231 113 19 chr2 25300328 25300409 -225387445 - MIR SINE MIR -67 195 123 2002 128 3 32 chr2 25300409 25300721 -225387133 + AluSx SINE Alu 1 303 -9 461 231 113 19 chr2 25300721 25300799 -225387055 - MIR SINE MIR -139 123 21 323 276 84 34 chr2 25301019 25301182 -225386672 - MER5A DNA MER1_type -8 181 1 1340 109 63 225 chr2 25303126 25303540 -225384314 + MER7A DNA MER2_type 1 345 -1 32 0 0 0 chr2 25304452 25304484 -225383370 + AT_rich Low_complexity Low_complexity 1 32 0 828 154 8 0 chr2 25304484 25304601 -225383253 - FLAM_C SINE Alu -15 118 1 1199 119 4 132 chr2 25305074 25305135 -225382719 + AluJo SINE Alu 88 155 -157 2265 99 0 0 chr2 25305135 25305455 -225382399 + AluSg SINE Alu 1 320 0 1199 119 4 132 chr2 25305455 25305469 -225382385 + AluJo SINE Alu 155 169 -143 1784 164 3 10 chr2 25305469 25305773 -225382081 + AluJo SINE Alu 1 302 -10 1199 119 4 132 chr2 25305773 25305938 -225381916 + AluJo SINE Alu 169 299 -13 1144 217 68 32 chr2 25306533 25306842 -225381012 - MER2 DNA MER2_type -25 320 1 253 241 111 46 chr2 25307285 25307393 -225380461 - MER5A DNA MER1_type -6 183 69 293 306 51 88 chr2 25307434 25307888 -225379966 - L2 LINE L2 -653 2661 2225 2114 114 7 7 chr2 25307941 25308238 -225379616 - AluSx SINE Alu -15 297 1 274 194 113 0 chr2 25308584 25308646 -225379208 - L2 LINE L2 -1 3312 3244 723 221 0 8 chr2 25308824 25308955 -225378899 + FLAM_A SINE Alu 1 130 -3 337 242 39 39 chr2 25309149 25309277 -225378577 + L1 LINE L1 5265 5392 -754 1883 167 0 0 chr2 25309281 25309563 -225378291 + AluJo SINE Alu 1 282 -30 960 267 12 18 chr2 25309687 25310020 -225377834 + L1ME4a LINE L1 5538 5868 -253 234 330 55 0 chr2 25310048 25310139 -225377715 - MIR SINE MIR -1 261 166 363 23 0 0 chr2 25310425 25310469 -225377385 + (CA)n Simple_repeat Simple_repeat 1 44 0 198 208 0 0 chr2 25310469 25310517 -225377337 + GA-rich Low_complexity Low_complexity 3 50 0 314 308 164 0 chr2 25310667 25310771 -225377083 + L2 LINE L2 3141 3261 -11 826 220 62 50 chr2 25311074 25311333 -225376521 - MIR SINE MIR 0 262 1 1565 165 61 11 chr2 25311881 25312160 -225375694 + AluJb SINE Alu 1 293 -19 216 310 90 10 chr2 25313014 25313114 -225374740 - L2 LINE L2 -12 3260 3153 200 340 174 0 chr2 25313403 25313547 -225374307 - MIR SINE MIR -10 252 84 1945 154 3 3 chr2 25314368 25314667 -225373187 - AluJb SINE Alu -13 299 1 2276 110 3 0 chr2 25315863 25316162 -225371692 + AluSx SINE Alu 1 300 -12 570 203 23 30 chr2 25317995 25318128 -225369726 - AluSg1 SINE Alu -176 133 2 1089 148 0 23 chr2 25319136 25319312 -225368542 - AluJo/FRAM SINE Alu -7 305 134 1836 142 35 10 chr2 25319312 25319600 -225368254 - AluSx SINE Alu -16 296 2 278 218 79 74 chr2 25319645 25319832 -225368022 + L1MDa LINE L1 1543 1726 -4814 1728 182 7 3 chr2 25319832 25320161 -225367693 + AluJb SINE Alu 1 312 0 278 218 79 74 chr2 25320161 25320197 -225367657 + L1MDa LINE L1 1726 1760 -4780 884 159 34 193 chr2 25320333 25320379 -225367475 + L1M4 LINE L1 4136 4188 -1958 1856 142 3 60 chr2 25320379 25320530 -225367324 + AluJb SINE Alu 1 124 -188 2176 109 13 10 chr2 25320530 25320833 -225367021 + AluY SINE Alu 1 304 -7 1856 142 3 60 chr2 25320833 25321012 -225366842 + AluJb SINE Alu 124 312 0 884 159 34 193 chr2 25321012 25321136 -225366718 + L1M4 LINE L1 4188 4330 -1816 1731 170 7 17 chr2 25321136 25321430 -225366424 + AluJo SINE Alu 1 291 -21 884 159 34 193 chr2 25321430 25321561 -225366293 + L1M4 LINE L1 4330 4377 -1769 2444 69 0 10 chr2 25321561 25321865 -225365989 + AluY SINE Alu 1 301 -10 884 159 34 193 chr2 25321865 25321913 -225365941 + L1M4 LINE L1 4377 4431 -1715 1966 136 0 0 chr2 25321914 25322187 -225365667 + AluSx SINE Alu 1 273 -39 229 182 0 0 chr2 25322187 25322231 -225365623 + GA-rich Low_complexity Low_complexity 1 44 0 966 138 6 11 chr2 25322231 25322412 -225365442 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 572 138 13 38 chr2 25322418 25322577 -225365277 + GA-rich Low_complexity Low_complexity 2 156 0 1065 208 80 13 chr2 25322582 25322895 -225364959 + L1M4 LINE L1 4416 4749 -1397 2568 118 66 9 chr2 25323857 25324282 -225363572 + L1MA4A LINE L1 5762 6210 -93 1921 105 19 0 chr2 25324291 25324548 -225363306 - L1PA12 LINE L1 0 6168 5907 658 106 0 0 chr2 25324548 25324642 -225363212 + L1MA4A LINE L1 6204 6297 -6 264 236 42 0 chr2 25325028 25325100 -225362754 + L2 LINE L2 2196 2270 -1044 1350 270 163 22 chr2 25325247 25326199 -225361655 + L2 LINE L2 2229 3311 -2 525 184 48 24 chr2 25326239 25326364 -225361490 + MER97a DNA MER1_type? 767 894 0 320 197 0 0 chr2 25326364 25326425 -225361429 - L1M4 LINE L1 -1609 4537 4477 2304 103 3 0 chr2 25326463 25326765 -225361089 - AluSp SINE Alu -10 303 1 2186 219 30 16 chr2 25326769 25327330 -225360524 - L1M4 LINE L1 -1661 4485 3917 509 302 80 24 chr2 25327334 25327672 -225360182 - L1MEc LINE L1 -4653 1743 1387 2287 120 0 3 chr2 25327675 25327983 -225359871 - AluSx SINE Alu -5 307 1 545 297 114 67 chr2 25328121 25328436 -225359418 - L1MEc LINE L1 -5138 1067 719 2398 95 0 3 chr2 25328436 25328741 -225359113 - AluSx SINE Alu -8 304 1 545 297 114 67 chr2 25328741 25328916 -225358938 - L1MEc LINE L1 -5486 719 554 2245 98 3 0 chr2 25329274 25329561 -225358293 - AluSq SINE Alu -21 292 5 239 406 30 0 chr2 25330807 25330940 -225356914 - L2 LINE L2 -461 2853 2717 2039 122 6 34 chr2 25331374 25331695 -225356159 + AluSx SINE Alu 1 312 0 234 311 111 0 chr2 25331818 25331908 -225355946 - L2 LINE L2 -2 3311 3212 1093 321 45 3 chr2 25331934 25332413 -225355441 - L2 LINE L2 -77 3236 2740 2022 106 20 17 chr2 25332616 25332917 -225354937 - AluSx SINE Alu -10 302 1 1460 190 97 15 chr2 25333163 25333505 -225354349 + L1MD3 LINE L1 4568 4937 -1209 2059 85 44 4 chr2 25333507 25333811 -225354043 - AluSq SINE Alu 0 315 1 1249 215 13 16 chr2 25333821 25334181 -225353673 + L1MD3 LINE L1 5267 7993 -2 1158 157 0 30 chr2 25334181 25334378 -225353476 - AluJb SINE Alu -12 300 110 2283 106 0 3 chr2 25334503 25334805 -225353049 + AluSq SINE Alu 1 301 -12 2244 210 61 9 chr2 25334805 25335349 -225352505 + L1ME1 LINE L1 5595 6166 0 * 3457 141 63 91 chr2 25335340 25336121 -225351733 + L1MB2 LINE L1 5413 6171 0 294 148 0 0 chr2 25336472 25336526 -225351328 + (CA)n Simple_repeat Simple_repeat 2 55 0 1721 173 3 7 chr2 25336977 25337260 -225350594 + AluJo SINE Alu 1 282 -30 192 97 0 0 chr2 25337263 25337294 -225350560 + (T)n Simple_repeat Simple_repeat 1 31 0 1391 137 48 9 chr2 25337410 25337637 -225350217 - MER46A DNA MER2_type 0 236 1 1917 108 37 0 chr2 25337997 25338286 -225349568 + AluSg SINE Alu 1 299 0 1304 201 112 29 chr2 25339128 25339282 -225348572 - MER58B DNA MER1_type -2079 341 201 1624 154 50 40 chr2 25339282 25339581 -225348273 - AluSx SINE Alu -10 302 1 1304 201 112 29 chr2 25339581 25339740 -225348114 - MER58B DNA MER1_type -2219 201 2 428 276 78 0 chr2 25340329 25340445 -225347409 - L2 LINE L2 0 3313 3189 186 236 90 22 chr2 25340506 25340595 -225347259 - MIR SINE MIR -50 212 118 2332 110 0 0 chr2 25340597 25340896 -225346958 - AluSx SINE Alu -13 299 1 222 206 191 0 chr2 25341151 25341214 -225346640 + L2 LINE L2 3198 3272 0 2123 132 0 3 chr2 25341253 25341557 -225346297 + AluSx SINE Alu 1 303 -9 232 287 54 100 chr2 25341674 25341793 -225346061 - MER5B DNA MER1_type 0 189 63 2447 82 3 0 chr2 25341793 25342096 -225345758 - AluSp SINE Alu -9 304 1 232 287 54 100 chr2 25342096 25342152 -225345702 - MER5B DNA MER1_type -126 63 6 240 224 20 0 chr2 25342191 25342240 -225345614 - L3 LINE CR1 -8 1569 1520 340 301 32 38 chr2 25342625 25342805 -225345049 + MLT1J2 LTR MaLR 263 401 -8 339 226 104 0 chr2 25342866 25342972 -225344882 + L1ME LINE L1 5688 5804 -366 2198 99 31 0 chr2 25343256 25343550 -225344304 + AluSq SINE Alu 1 303 -10 428 296 48 77 chr2 25343740 25344092 -225343762 + HAL1 LINE L1 294 635 -1872 375 41 0 0 chr2 25344241 25344290 -225343564 + (TA)n Simple_repeat Simple_repeat 1 49 0 2205 120 0 7 chr2 25344290 25344589 -225343265 - AluSq SINE Alu -16 297 1 2768 259 66 83 chr2 25344801 25345137 -225342717 + L1M4 LINE L1 2742 3082 -3064 2241 100 7 3 chr2 25345137 25345436 -225342418 + AluSc SINE Alu 3 302 -7 2768 259 66 83 chr2 25345436 25346589 -225341265 + L1M4 LINE L1 3082 4370 -1776 311 216 14 0 chr2 25346589 25346663 -225341191 + L1MB7 LINE L1 6099 6173 -11 2768 259 66 83 chr2 25346663 25347415 -225340439 + L1M4 LINE L1 4370 5134 -1012 295 287 96 22 chr2 25347746 25347882 -225339972 + HAL1b LINE L1 746 891 -457 28 0 0 0 chr2 25347905 25347933 -225339921 + AT_rich Low_complexity Low_complexity 1 28 0 1963 135 3 7 chr2 25348050 25348339 -225339515 + AluJb SINE Alu 1 288 -24 333 279 184 5 chr2 25348350 25348540 -225339314 + HAL1 LINE L1 2283 2506 -1 2122 138 7 0 chr2 25349860 25350165 -225337689 + AluSp SINE Alu 1 307 -6 1753 164 3 13 chr2 25350937 25351241 -225336613 + AluJb SINE Alu 1 301 -11 208 239 45 45 chr2 25351408 25351475 -225336379 + L2 LINE L2 2714 2780 -534 5808 107 35 36 chr2 25351993 25352949 -225334905 - SVA Other Other 0 1386 432 4831 111 45 29 chr2 25352981 25354762 -225333092 - SVA Other Other -518 868 1 2069 87 0 0 chr2 25354776 25355040 -225332814 - AluSc SINE Alu -45 264 1 1719 150 3 72 chr2 25356100 25356407 -225331447 + AluJo SINE Alu 1 286 -26 2166 110 3 0 chr2 25356455 25356745 -225331109 - AluSq SINE Alu -18 295 5 233 227 72 0 chr2 25357001 25357078 -225330776 - L1ME LINE L1 -263 5903 5825 261 0 8 0 chr2 25357097 25357165 -225330689 + (T)n Simple_repeat Simple_repeat 1 29 0 1422 252 103 32 chr2 25357204 25358487 -225329367 - L1ME LINE L1 -371 5799 4405 267 164 0 18 chr2 25358519 25358574 -225329280 - L1MB2 LINE L1 0 6171 6118 180 0 0 0 chr2 25358574 25358594 -225329260 + (TTA)n Simple_repeat Simple_repeat 2 21 0 298 118 59 0 chr2 25358594 25358645 -225329209 - AluJ/FRAM SINE Alu -17 285 232 4523 27 8 0 chr2 25358663 25359152 -225328702 + SVA Other Other 891 1383 -3 2241 103 6 10 chr2 25359297 25359609 -225328245 + AluSx SINE Alu 1 311 -1 438 201 86 72 chr2 25359624 25359763 -225328091 - L1MB2 LINE L1 -61 6110 5970 * 1457 184 4 0 chr2 25359757 25360001 -225327853 - L1MB2 LINE L1 -413 5758 5514 335 318 71 24 chr2 25360009 25360179 -225327675 - L1ME LINE L1 -2020 4126 3949 860 114 0 0 chr2 25360215 25360338 -225327516 - AluSg/x SINE Alu -12 298 176 815 280 78 33 chr2 25360351 25360893 -225326961 - L1ME LINE L1 -2204 3942 3377 299 276 28 7 chr2 25361227 25361372 -225326482 - L1ME LINE L1 -3762 2384 2237 2353 97 7 0 chr2 25361394 25361704 -225326150 - AluSx SINE Alu 0 312 1 24 0 0 0 chr2 25362952 25362976 -225324878 + AT_rich Low_complexity Low_complexity 1 24 0 325 312 69 6 chr2 25363063 25363250 -225324604 - L1MDa LINE L1 -762 2139 1852 * 505 243 61 42 chr2 25363230 25363444 -225324410 - L1MDa LINE L1 -5007 1523 1306 603 219 0 34 chr2 25363730 25363858 -225323996 + MER3 DNA MER1_type 1 125 -37 2107 108 35 0 chr2 25363858 25364146 -225323708 - AluSx SINE Alu -14 298 1 603 219 0 34 chr2 25364146 25364163 -225323691 + MER3 DNA MER1_type 125 141 -68 1948 179 66 34 chr2 25364166 25364606 -225323248 + MER101 LTR ERV1 11 464 -10 318 345 74 5 chr2 25364621 25364824 -225323030 - L1MDa LINE L1 -5664 866 650 1649 204 0 10 chr2 25365065 25365373 -225322481 - AluJo SINE Alu -7 305 1 696 268 111 90 chr2 25365393 25365539 -225322315 - L1 LINE L1 -2307 3839 3697 1923 114 7 4 chr2 25365539 25365812 -225322042 - AluSq SINE Alu -2 311 38 696 268 111 90 chr2 25365812 25366695 -225321159 - L1 LINE L1 -2449 3697 2789 1188 261 52 17 chr2 25366704 25367098 -225320756 - L2 LINE L2 -294 3019 2611 28 48 0 0 chr2 25367276 25367318 -225320536 + AT_rich Low_complexity Low_complexity 1 42 0 204 242 15 0 chr2 25367429 25367495 -225320359 + (TA)n Simple_repeat Simple_repeat 1 67 0 1820 129 0 0 chr2 25367938 25368186 -225319668 - AluJb SINE Alu -64 248 1 2288 71 7 19 chr2 25368437 25368745 -225319109 + AluSq SINE Alu 1 304 -9 713 291 80 6 chr2 25369437 25369803 -225318051 + L1ME3A LINE L1 5524 5940 -230 2373 83 17 0 chr2 25369997 25370298 -225317556 + AluY SINE Alu 1 306 -5 257 214 36 0 chr2 25370595 25370651 -225317203 - L1ME4a LINE L1 -195 5926 5869 2167 131 0 13 chr2 25370716 25371030 -225316824 + AluSx SINE Alu 1 310 -2 364 309 81 94 chr2 25371041 25371413 -225316441 - L1MC4a LINE L1 -1976 5832 5466 2246 93 3 17 chr2 25372256 25372556 -225315298 - AluSc SINE Alu -9 300 5 280 304 5 22 chr2 25372726 25372817 -225315037 + MIR SINE MIR 59 149 -73 689 236 18 12 chr2 25372820 25372985 -225314869 + Charlie1 DNA MER1_type 2 167 -2594 2229 156 44 11 chr2 25372988 25373298 -225314556 + Charlie1 DNA MER1_type 2312 2641 -120 2151 114 10 0 chr2 25373298 25373595 -225314259 - AluSx SINE Alu -12 300 1 2229 156 44 11 chr2 25373595 25373719 -225314135 + Charlie1 DNA MER1_type 2641 2760 -1 2372 93 3 13 chr2 25374967 25375278 -225312576 + AluSx SINE Alu 1 308 -4 191 237 155 31 chr2 25375280 25375377 -225312477 - L2 LINE L2 0 3313 3205 864 204 19 0 chr2 25375602 25375764 -225312090 + L1MC/D LINE L1 5398 5562 -2246 2611 208 52 81 chr2 25376584 25377108 -225310746 - HsTC2c DNA MER2_type -1169 729 232 2300 92 3 0 chr2 25377108 25377401 -225310453 - AluSc SINE Alu -15 294 1 2611 208 52 81 chr2 25377401 25377625 -225310229 - HsTC2c DNA MER2_type -1666 232 3 180 322 23 46 chr2 25377654 25377741 -225310113 + L3b LINE CR1 1410 1494 -89 208 252 59 74 chr2 25378459 25378594 -225309260 - MER5B DNA MER1_type -45 133 1 1302 261 195 46 chr2 25379853 25380484 -225307370 + L2 LINE L2 1 725 -2589 732 214 112 96 chr2 25380484 25380807 -225307047 + MLT1D LTR MaLR 2 329 -176 2150 109 20 13 chr2 25380836 25381140 -225306714 + AluSx SINE Alu 1 306 -6 1665 244 54 46 chr2 25381140 25381644 -225306210 + MLT2B1 LTR ERVL 13 520 0 342 314 114 7 chr2 25381644 25381784 -225306070 + MLT1D LTR MaLR 313 467 0 1024 272 107 33 chr2 25381803 25382289 -225305565 + L2 LINE L2 733 1254 -2060 328 258 0 0 chr2 25382278 25382344 -225305510 + L2 LINE L2 3005 3070 -243 * 2582 148 29 5 chr2 25382366 25382777 -225305077 + MSTB LTR MaLR 1 421 -5 4420 163 28 37 chr2 25382778 25383635 -225304219 - L1MB7 LINE L1 -19 6165 5317 1995 145 10 0 chr2 25383647 25383943 -225303911 - AluSx SINE Alu -13 299 1 945 128 122 17 chr2 25383960 25384140 -225303714 - L1MB2 LINE L1 -12 6159 5961 6325 199 42 41 chr2 25384142 25384755 -225303099 - L1MB7 LINE L1 -814 5332 4721 2128 73 0 38 chr2 25384755 25385042 -225302812 - AluY SINE Alu -3 308 33 6325 199 42 41 chr2 25385042 25385248 -225302606 - L1MB7 LINE L1 -1425 4721 4517 2149 128 0 22 chr2 25385248 25385561 -225302293 - AluSx SINE Alu -6 306 1 6325 199 42 41 chr2 25385561 25385740 -225302114 - L1MB7 LINE L1 -1629 4517 4340 595 90 13 0 chr2 25385740 25385818 -225302036 - MADE1 DNA Mariner -1 79 1 6325 199 42 41 chr2 25385818 25386113 -225301741 - L1MB7 LINE L1 -1806 4340 4047 1565 149 17 61 chr2 25386113 25386409 -225301445 - AluJb SINE Alu -18 294 12 6325 199 42 41 chr2 25386409 25386699 -225301155 - L1MB7 LINE L1 -2099 4047 3744 1078 230 201 94 chr2 25386790 25387377 -225300477 + MLT1E3 LTR MaLR 5 624 0 601 238 32 0 chr2 25387377 25387503 -225300351 - MER94 DNA DNA -4 130 1 386 350 38 0 chr2 25387587 25387747 -225300107 - L2 LINE L2 -2881 433 268 237 171 118 53 chr2 25387889 25387965 -225299889 - MER4D LTR ERV1 -68 835 755 2368 94 3 0 chr2 25388754 25389062 -225298792 + AluSc SINE Alu 1 309 0 1115 92 0 13 chr2 25389069 25389222 -225298632 + L1MB3 LINE L1 6028 6178 -5 814 255 109 39 chr2 25389610 25390183 -225297671 + MLT1G LTR MaLR 22 590 0 2361 82 7 0 chr2 25390691 25390995 -225296859 + AluSq SINE Alu 1 306 -7 1609 171 40 20 chr2 25391006 25391310 -225296544 + AluJb SINE Alu 1 310 -2 1898 206 122 36 chr2 25391344 25391877 -225295977 + L2 LINE L2 1775 2353 -961 2502 60 0 0 chr2 25392251 25392549 -225295305 + AluY SINE Alu 1 298 -13 370 231 8 142 chr2 25392967 25393012 -225294842 + MER5B DNA MER1_type 1 50 -128 2259 74 7 23 chr2 25393012 25393311 -225294543 - AluSq SINE Alu -19 294 1 370 231 8 142 chr2 25393311 25393399 -225294455 + MER5B DNA MER1_type 50 116 -62 532 281 152 33 chr2 25393904 25394267 -225293587 - MLT1J2 LTR MaLR -44 406 1 536 232 8 8 chr2 25394269 25394394 -225293460 + L2 LINE L2 3189 3313 0 274 186 0 17 chr2 25394989 25395048 -225292806 + L1ME3A LINE L1 6113 6170 0 2596 58 0 10 chr2 25396282 25396593 -225291261 - AluY SINE Alu -3 308 1 30 0 0 0 chr2 25396907 25396937 -225290917 + AT_rich Low_complexity Low_complexity 1 30 0 198 0 0 0 chr2 25396937 25396959 -225290895 + (C)n Simple_repeat Simple_repeat 1 22 0 1848 165 0 7 chr2 25397319 25397628 -225290226 + AluSx SINE Alu 1 307 0 2408 84 10 0 chr2 25397887 25398195 -225289659 + AluSp SINE Alu 1 311 -2 1234 141 0 0 chr2 25400245 25400422 -225287432 + AluSg/x SINE Alu 120 296 -16 326 188 71 35 chr2 25401115 25401200 -225286654 + L2 LINE L2 3169 3256 -16 1983 130 42 0 chr2 25402865 25403150 -225284704 + AluSg SINE Alu 1 297 -13 2378 76 30 0 chr2 25403497 25403800 -225284054 - AluSx SINE Alu 0 312 1 8489 155 89 48 chr2 25403883 25405568 -225282286 - MER52A LTR ERV1 0 1755 1 523 231 40 40 chr2 25405840 25405907 -225281947 - L1MC5 LINE L1 -35 7926 7860 2374 101 0 0 chr2 25405907 25406214 -225281640 + AluSx SINE Alu 1 307 -5 523 231 40 40 chr2 25406214 25406319 -225281535 - L1MC5 LINE L1 -100 7861 7754 327 270 262 28 chr2 25406348 25406600 -225281254 - L1ME LINE L1 -401 5763 5453 21 82 0 0 chr2 25406703 25406752 -225281102 + AT_rich Low_complexity Low_complexity 1 49 0 2808 191 50 10 chr2 25408798 25409518 -225278336 - L1MC4 LINE L1 0 8042 7222 1440 139 0 43 chr2 25411260 25411490 -225276364 + AluJb SINE Alu 85 304 -8 260 283 25 82 chr2 25411853 25412012 -225275842 - L2 LINE L2 -4 3309 3160 933 246 49 92 chr2 25412117 25412608 -225275246 + MLT1J LTR MaLR 34 503 -8 199 343 71 10 chr2 25412627 25412726 -225275128 - MIR SINE MIR -144 118 14 187 405 41 23 chr2 25413171 25413391 -225274463 - L2 LINE L2 -660 2654 2431 2357 82 7 0 chr2 25413476 25413768 -225274086 - AluY SINE Alu -17 294 1 1907 151 0 10 chr2 25413942 25414240 -225273614 + AluJo SINE Alu 1 295 -17 285 286 100 56 chr2 25414487 25414718 -225273136 + MLT1L LTR MaLR 241 583 -30 35 24 0 0 chr2 25415307 25415349 -225272505 + AT_rich Low_complexity Low_complexity 1 42 0 2280 119 0 0 chr2 25415968 25416278 -225271576 + AluSx SINE Alu 1 310 -2 28 0 0 0 chr2 25416835 25416863 -225270991 + AT_rich Low_complexity Low_complexity 1 28 0 531 244 132 12 chr2 25416975 25417225 -225270629 - L1ME4a LINE L1 -290 5831 5552 216 97 0 0 chr2 25418302 25418333 -225269521 + (CCA)n Simple_repeat Simple_repeat 1 31 0 1628 189 6 43 chr2 25418525 25418714 -225269140 - AluJo SINE Alu -1 311 137 2136 114 30 0 chr2 25418714 25419013 -225268841 - AluSx SINE Alu -4 308 1 1628 189 6 43 chr2 25419013 25419146 -225268708 - AluJo SINE Alu -175 137 1 22 35 0 0 chr2 25419959 25419988 -225267866 + AT_rich Low_complexity Low_complexity 1 29 0 271 168 99 59 chr2 25420245 25420346 -225267508 + L1MC5 LINE L1 7275 7379 -582 387 268 39 16 chr2 25420595 25420722 -225267132 + MIR SINE MIR 118 247 -15 745 296 101 56 chr2 25422928 25423354 -225264500 + LTR67 LTR ERVL 113 557 0 2248 98 14 0 chr2 25423444 25423739 -225264115 + AluSp SINE Alu 1 299 -14 459 0 0 0 chr2 25423785 25423836 -225264018 + (CA)n Simple_repeat Simple_repeat 2 52 0 572 246 32 8 chr2 25423841 25423967 -225263887 - MER5B DNA MER1_type -49 129 1 346 244 78 34 chr2 25423988 25424145 -225263709 + L1MC4a LINE L1 5288 5444 -730 1135 159 0 0 chr2 25424227 25424403 -225263451 - AluJb SINE Alu -1 311 136 1164 196 51 106 chr2 25424618 25424843 -225263011 - L1ME3A LINE L1 0 6170 5981 2228 119 0 0 chr2 25424843 25425137 -225262717 - AluSx SINE Alu -18 294 1 1164 196 51 106 chr2 25425137 25425364 -225262490 - L1ME3A LINE L1 -189 5981 5743 446 175 11 7 chr2 25425553 25425646 -225262208 + MER2 DNA MER2_type 1 89 -150 727 192 8 0 chr2 25425826 25425951 -225261903 + FLAM_A SINE Alu 2 127 -6 387 145 36 24 chr2 25426229 25426312 -225261542 + L1MC4a LINE L1 5680 5763 -2045 341 302 114 41 chr2 25426319 25426564 -225261290 + L1MC4a LINE L1 5813 6075 -1733 1561 244 55 24 chr2 25426591 25427210 -225260644 + L1M4 LINE L1 3015 3652 -2494 186 43 0 0 chr2 25427238 25427261 -225260593 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 751 179 0 0 chr2 25427261 25427378 -225260476 - AluJb SINE Alu -193 119 3 2067 96 3 3 chr2 25427380 25427671 -225260183 - L1PA16 LINE L1 -12 6154 5864 2005 257 86 19 chr2 25427671 25427809 -225260045 + L1M4 LINE L1 3639 3766 -2380 2236 117 0 0 chr2 25427809 25428117 -225259737 + AluSg SINE Alu 1 308 -2 2005 257 86 19 chr2 25428117 25428874 -225258980 + L1M4 LINE L1 3766 4594 -1552 180 0 0 0 chr2 25428896 25428916 -225258938 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3462 194 70 15 chr2 25428916 25429698 -225258156 - MER21B LTR ERV1 -19 844 20 390 179 26 13 chr2 25429800 25429878 -225257976 - MER21B LTR ERV1 -773 90 12 189 319 0 0 chr2 25430046 25430093 -225257761 - MER5B DNA MER1_type -129 49 3 2618 55 0 0 chr2 25430782 25431093 -225256761 + AluY SINE Alu 1 311 0 1713 156 52 10 chr2 25431742 25432030 -225255824 + AluSx SINE Alu 1 300 -12 2486 80 0 0 chr2 25433891 25434193 -225253661 + AluSg SINE Alu 1 302 -8 757 167 15 0 chr2 25434817 25434949 -225252905 + AluJo SINE Alu 1 134 -178 1051 149 0 18 chr2 25435005 25435173 -225252681 + AluJo SINE Alu 131 295 -17 203 59 0 29 chr2 25435476 25435510 -225252344 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2178 81 23 55 chr2 25435578 25435888 -225251966 - AluSp SINE Alu -13 300 1 1782 131 15 15 chr2 25436329 25436596 -225251258 + AluSx SINE Alu 1 267 -45 305 172 0 92 chr2 25436600 25436687 -225251167 - MER115 DNA AcHobo -106 587 509 539 291 34 0 chr2 25436721 25436869 -225250985 - MER115 DNA AcHobo -253 440 288 309 345 108 14 chr2 25436974 25437270 -225250584 + L1M4 LINE L1 1263 1586 -4956 354 297 34 0 chr2 25437699 25437817 -225250037 + L1MEd LINE L1 636 757 -5448 2616 124 120 22 chr2 25437984 25438476 -225249378 + MER4B LTR ERV1 1 540 -70 216 0 0 0 chr2 25439683 25439707 -225248147 + (T)n Simple_repeat Simple_repeat 1 24 0 1847 181 37 3 chr2 25439907 25440256 -225247598 + MLT1A1 LTR MaLR 1 361 -4 676 183 17 0 chr2 25440614 25440734 -225247120 + FLAM_A SINE Alu 1 122 -11 2314 92 3 7 chr2 25441262 25441565 -225246289 + AluSp SINE Alu 1 302 -11 2316 102 0 0 chr2 25441862 25442167 -225245687 - AluY SINE Alu -6 305 1 259 258 71 32 chr2 25443266 25443421 -225244433 + L1MEd LINE L1 1514 1674 -4722 363 329 95 33 chr2 25443483 25443757 -225244097 + L1MEd LINE L1 2166 2456 -3940 796 212 10 5 chr2 25443783 25443986 -225243868 + L1MB7 LINE L1 3882 4085 -2061 * 4126 160 34 34 chr2 25443982 25444688 -225243166 + L1MB7 LINE L1 5100 5809 -375 2409 80 3 19 chr2 25444688 25444999 -225242855 + AluSp SINE Alu 1 306 -7 4126 160 34 34 chr2 25444999 25445351 -225242503 + L1MB7 LINE L1 5809 6159 -25 713 265 17 80 chr2 25445383 25445438 -225242416 + L1MEd LINE L1 2454 2511 -3704 1358 206 78 27 chr2 25445438 25445734 -225242120 + AluJo SINE Alu 1 311 -1 713 265 17 80 chr2 25445734 25446044 -225241810 + L1MEd LINE L1 2511 2779 -3436 2256 112 7 0 chr2 25446044 25446349 -225241505 + AluSx SINE Alu 1 307 -5 713 265 17 80 chr2 25446349 25446507 -225241347 + L1MEd LINE L1 2779 2945 -3270 690 267 83 56 chr2 25446512 25446537 -225241317 + L1MEd LINE L1 4049 4072 -2143 2360 155 46 12 chr2 25446537 25446951 -225240903 + MSTC LTR MaLR 1 428 0 690 267 83 56 chr2 25446951 25447290 -225240564 + L1MEd LINE L1 4072 4400 -1815 261 0 0 0 chr2 25447290 25447319 -225240535 + (TCTCCC)n Simple_repeat Simple_repeat 3 31 0 8350 21 0 293 chr2 25447319 25449202 -225238652 + SVA Other Other 53 1383 -3 690 267 83 56 chr2 25449202 25449282 -225238572 + L1MEd LINE L1 4400 4476 -1739 2001 119 26 19 chr2 25449282 25449592 -225238262 + AluSx SINE Alu 1 312 0 690 267 83 56 chr2 25449592 25449755 -225238099 + L1MEd LINE L1 4476 4676 -1539 229 175 53 0 chr2 25449759 25449816 -225238038 + L1ME1 LINE L1 6106 6165 -1 477 208 15 128 chr2 25449851 25450116 -225237738 + L1MEd LINE L1 4685 4919 -1296 341 279 32 45 chr2 25450382 25450536 -225237318 + L1MEd LINE L1 4969 5120 -1095 229 141 71 71 chr2 25450655 25450740 -225237114 + MER112 DNA MER1_type 1 85 -175 301 277 65 43 chr2 25450799 25450983 -225236871 + MER112 DNA MER1_type 67 254 -6 186 311 0 151 chr2 25451106 25451160 -225236694 - MIR SINE MIR -99 109 77 7415 41 1 0 chr2 25451160 25452499 -225235355 + L1PA5 LINE L1 4812 6151 -3 186 311 0 151 chr2 25452499 25452550 -225235304 - MIR SINE MIR -131 77 20 204 182 0 0 chr2 25452663 25452707 -225235147 + (CA)n Simple_repeat Simple_repeat 2 45 0 188 284 17 97 chr2 25453536 25453712 -225234142 + MIR3 SINE MIR 20 181 -27 716 297 85 52 chr2 25453714 25454232 -225233622 + MLT1G1 LTR MaLR 1 535 -60 572 191 0 0 chr2 25454761 25454850 -225233004 + AluJ/FLAM SINE Alu 3 91 -221 2000 55 0 0 chr2 25454856 25455091 -225232763 + AluY SINE Alu 1 235 -76 189 0 0 0 chr2 25455575 25455596 -225232258 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 561 196 0 10 chr2 25455597 25455694 -225232160 - FLAM_A SINE Alu -46 96 1 2352 85 3 0 chr2 25455957 25456251 -225231603 - AluY SINE Alu -16 295 1 207 100 0 0 chr2 25456328 25456358 -225231496 + (TG)n Simple_repeat Simple_repeat 2 31 0 219 293 0 113 chr2 25456450 25456552 -225231302 + MER5A DNA MER1_type 36 121 -68 1904 158 14 3 chr2 25456552 25456843 -225231011 - AluJb SINE Alu -18 294 1 219 293 0 113 chr2 25456843 25456873 -225230981 + MER5A DNA MER1_type 121 153 -36 2310 94 3 3 chr2 25456888 25457185 -225230669 - AluSx SINE Alu -15 297 1 207 248 136 56 chr2 25457474 25457599 -225230255 + L2 LINE L2 3178 3312 -1 3981 98 9 0 chr2 25457884 25458433 -225229421 + MER41A LTR ERV1 1 554 0 1922 147 10 19 chr2 25458605 25458917 -225228937 + AluSx SINE Alu 1 309 -3 1821 137 88 0 chr2 25459232 25459516 -225228338 + AluSx SINE Alu 1 309 -3 1758 159 24 14 chr2 25459583 25459872 -225227982 - AluJb SINE Alu -20 292 1 2474 133 22 48 chr2 25460137 25460325 -225227529 + MER4E LTR ERV1 1 192 -587 2333 93 13 0 chr2 25460325 25460625 -225227229 + AluSx SINE Alu 1 304 -8 2474 133 22 48 chr2 25460625 25461047 -225226807 + MER4E LTR ERV1 192 779 0 471 265 88 21 chr2 25461145 25461428 -225226426 + L1M4 LINE L1 2214 2515 -3631 855 111 0 0 chr2 25461725 25461842 -225226012 + FLAM_C SINE Alu 2 118 -15 466 283 169 16 chr2 25461889 25462196 -225225658 + L1M4 LINE L1 2900 3253 -2893 249 299 10 31 chr2 25462196 25462293 -225225561 + MER5B DNA MER1_type 83 177 -1 340 25 0 0 chr2 25462615 25462655 -225225199 + L1PA16 LINE L1 6106 6145 -21 26 30 0 0 chr2 25462710 25462743 -225225111 + AT_rich Low_complexity Low_complexity 1 33 0 * 664 153 24 40 chr2 25462737 25462861 -225224993 + MER58B DNA MER1_type 218 339 -2 352 256 72 117 chr2 25462863 25463125 -225224729 + L1M4 LINE L1 3859 4131 -2015 2581 68 0 3 chr2 25463125 25463436 -225224418 - AluY SINE Alu -1 310 1 352 256 72 117 chr2 25463436 25463564 -225224290 + L1M4 LINE L1 4131 4225 -1921 1912 152 0 13 chr2 25463564 25463867 -225223987 + AluJb SINE Alu 1 299 -13 352 256 72 117 chr2 25463867 25463963 -225223891 + L1M4 LINE L1 4225 4324 -1822 433 210 43 72 chr2 25464357 25464495 -225223359 + L2 LINE L2 3161 3294 -19 222 292 75 89 chr2 25464568 25464810 -225223044 - L2 LINE L2 -354 2960 2723 2256 105 0 0 chr2 25464810 25465106 -225222748 + AluSx SINE Alu 1 296 -16 222 292 75 89 chr2 25465106 25465212 -225222642 - L2 LINE L2 -591 2723 2617 848 263 38 5 chr2 25465309 25465522 -225222332 - MIR SINE MIR -33 229 10 359 333 0 0 chr2 25465646 25465757 -225222097 - L3 LINE CR1 -11 1566 1456 2194 88 37 0 chr2 25467269 25467564 -225220290 + THE1A LTR MaLR 1 306 -49 183 156 0 0 chr2 25467564 25467596 -225220258 + A-rich Low_complexity Low_complexity 1 32 0 2328 110 13 0 chr2 25467606 25467943 -225219911 - AluSx SINE Alu 0 341 1 365 277 158 23 chr2 25468138 25468315 -225219539 - MIR SINE MIR -59 203 3 1267 163 34 0 chr2 25468415 25468624 -225219230 + MER20 DNA MER1_type 4 219 0 510 263 134 6 chr2 25468896 25469075 -225218779 + MIR SINE MIR 53 254 -8 237 289 0 0 chr2 25469213 25469258 -225218596 + LTR16C LTR ERVL 67 111 -380 1024 282 29 50 chr2 25469910 25470293 -225217561 + LTR16C LTR ERVL 103 477 -14 2126 118 3 10 chr2 25471023 25471320 -225216534 + AluSx SINE Alu 1 295 -17 4319 171 41 38 chr2 25471401 25471568 -225216286 + L1MC3 LINE L1 5107 5272 -874 1646 170 3 18 chr2 25471568 25471871 -225215983 + AluJo SINE Alu 3 301 0 4319 171 41 38 chr2 25471871 25472106 -225215748 + L1MC3 LINE L1 5272 4781 -1365 2422 101 0 0 chr2 25472106 25472413 -225215441 + AluSx SINE Alu 1 307 -5 4319 171 41 38 chr2 25472413 25473039 -225214815 + L1MC3 LINE L1 4780 5403 -743 733 164 16 8 chr2 25473061 25473189 -225214665 - AluJo SINE Alu -178 134 6 723 163 95 0 chr2 25473192 25473339 -225214515 + L1MC3 LINE L1 6118 6278 -1507 * 1032 219 8 4 chr2 25473335 25473573 -225214281 + L1ME1 LINE L1 2595 2833 -3313 * 1438 229 112 35 chr2 25473548 25474128 -225213726 + L1ME1 LINE L1 3154 3778 -2368 987 180 5 38 chr2 25474124 25474335 -225213519 + L1ME1 LINE L1 4735 4938 -1208 * 2300 120 36 31 chr2 25474334 25474726 -225213128 + L1MB7 LINE L1 5771 6164 -20 774 273 187 21 chr2 25474779 25475256 -225212598 - L1ME2 LINE L1 -283 5881 5326 260 277 141 5 chr2 25475375 25475559 -225212295 + L1ME1 LINE L1 5189 5397 -749 279 268 38 89 chr2 25475642 25475799 -225212055 + L1ME3 LINE L1 5961 6109 -53 481 267 162 37 chr2 25475853 25476004 -225211850 + L1ME1 LINE L1 5443 5574 -592 2266 113 0 3 chr2 25476004 25476313 -225211541 + AluSx SINE Alu 1 308 -4 481 267 162 37 chr2 25476313 25476560 -225211294 + L1ME1 LINE L1 5574 5903 -263 536 215 174 0 chr2 25476610 25476759 -225211095 + MER96 DNA MER1_type? 1 175 0 492 93 0 0 chr2 25476765 25476840 -225211014 + (CA)n Simple_repeat Simple_repeat 2 76 0 4751 70 3 2 chr2 25477031 25477641 -225210213 - L1PA8 LINE L1 -5 6167 5557 2223 258 119 40 chr2 25477777 25478743 -225209111 - Charlie7 DNA MER1_type -1450 1162 121 193 304 14 14 chr2 25478890 25478959 -225208895 - MIR SINE MIR -132 130 62 2159 122 0 0 chr2 25479476 25479770 -225208084 + AluY SINE Alu 1 294 -17 342 232 74 0 chr2 25480056 25480151 -225207703 + MIR SINE MIR 161 262 0 598 259 114 11 chr2 25480401 25480663 -225207191 + L1MC4a LINE L1 3875 4163 -1983 25 31 0 0 chr2 25480769 25480801 -225207053 + AT_rich Low_complexity Low_complexity 1 32 0 197 116 0 23 chr2 25481259 25481302 -225206552 + (GAAAA)n Simple_repeat Simple_repeat 4 45 0 2276 97 0 20 chr2 25481338 25481636 -225206218 + AluSx SINE Alu 1 292 -20 3172 167 65 35 chr2 25481798 25482089 -225205765 + L1MC2 LINE L1 5542 5823 -521 2572 65 0 0 chr2 25482089 25482395 -225205459 + AluY SINE Alu 1 306 -5 3172 167 65 35 chr2 25482395 25482811 -225205043 + L1MC2 LINE L1 5823 6270 -74 3213 140 52 2 chr2 25482876 25483432 -225204422 + L1MB3 LINE L1 5599 6182 -1 362 319 87 36 chr2 25483438 25483773 -225204081 + L1MC4a LINE L1 4914 5265 -881 963 135 377 0 chr2 25483835 25484050 -225203804 + AluJb SINE Alu 1 296 -6 307 331 74 0 chr2 25484208 25484371 -225203483 + L1MC4a LINE L1 5766 5940 -1868 419 331 29 0 chr2 25484679 25484815 -225203039 + MER91C DNA MER1_type 1 140 0 375 160 106 43 chr2 25484848 25484942 -225202912 + L1ME2 LINE L1 5987 6086 -78 2242 199 24 26 chr2 25484954 25485417 -225202437 + MER44D DNA MER2_type 89 605 0 286 206 31 20 chr2 25485417 25485509 -225202345 + L1ME2 LINE L1 6081 6334 0 189 203 10 0 chr2 25485665 25485713 -225202141 - MIR SINE MIR -63 145 104 279 0 0 0 chr2 25486335 25486366 -225201488 + (A)n Simple_repeat Simple_repeat 1 31 0 191 265 0 0 chr2 25486473 25486522 -225201332 - L2 LINE L2 0 3272 3224 27 49 0 0 chr2 25487206 25487247 -225200607 + GC_rich Low_complexity Low_complexity 1 41 0 240 207 43 52 chr2 25487713 25487829 -225200025 + (CGGG)n Simple_repeat Simple_repeat 3 117 0 29 47 0 0 chr2 25487841 25487884 -225199970 + GC_rich Low_complexity Low_complexity 1 43 0 234 0 0 0 chr2 25488717 25488743 -225199111 + (CCTG)n Simple_repeat Simple_repeat 2 27 0 2268 97 3 3 chr2 25488866 25489164 -225198690 + AluSx SINE Alu 1 298 -14 198 294 140 79 chr2 25490248 25490424 -225197430 + L2 LINE L2 2425 2624 -690 2214 106 0 10 chr2 25490424 25490725 -225197129 - AluSx SINE Alu -14 298 1 198 294 140 79 chr2 25490725 25490813 -225197041 + L2 LINE L2 2624 2705 -609 2480 86 0 3 chr2 25491235 25491548 -225196306 + AluSq SINE Alu 1 312 -1 261 303 64 117 chr2 25491597 25491729 -225196125 + MLT1H1 LTR MaLR 68 189 -366 2357 95 7 0 chr2 25491729 25492034 -225195820 - AluSg SINE Alu -3 307 1 261 303 64 117 chr2 25492034 25492089 -225195765 + MLT1H1 LTR MaLR 189 245 -310 788 208 68 31 chr2 25492134 25492326 -225195528 + MLT1H1 LTR MaLR 339 537 -18 860 205 100 0 chr2 25492567 25492767 -225195087 - MER58A DNA MER1_type -3 221 2 767 157 8 0 chr2 25492868 25492989 -225194865 - MLT1B LTR MaLR 0 390 269 714 206 0 0 chr2 25492989 25493115 -225194739 + AluJo/FLAM SINE Alu 5 130 -172 1891 110 78 11 chr2 25493115 25493396 -225194458 - AluSx SINE Alu -12 300 1 861 67 0 5 chr2 25493417 25493612 -225194242 - AluY SINE Alu -18 293 2 980 107 7 7 chr2 25493614 25493754 -225194100 - MLT1B LTR MaLR -214 176 37 1969 173 37 25 chr2 25493754 25494303 -225193551 + L1MB8 LINE L1 5006 5547 -631 2306 97 0 10 chr2 25494303 25494611 -225193243 - AluSg SINE Alu -5 305 1 1969 173 37 25 chr2 25494611 25494871 -225192983 + L1MB8 LINE L1 5547 6169 -9 1656 179 17 20 chr2 25494872 25495194 -225192660 - AluJb SINE Alu 0 312 1 2325 57 0 7 chr2 25495197 25495519 -225192335 - AluY SINE Alu 0 320 1 531 297 70 35 chr2 25495618 25495988 -225191866 + L1MC4a LINE L1 4540 4922 -1224 2226 87 10 7 chr2 25495996 25496285 -225191569 + AluSx SINE Alu 9 298 -14 1155 259 59 43 chr2 25496312 25496687 -225191167 + L1MC4a LINE L1 5491 5871 -1937 1332 168 0 9 chr2 25496690 25496910 -225190944 - AluJb SINE Alu -8 304 87 2115 114 3 29 chr2 25497158 25497464 -225190390 + AluSx SINE Alu 1 298 -14 936 288 102 25 chr2 25497469 25497841 -225190013 + L1ME4a LINE L1 5304 5741 -429 2093 138 7 0 chr2 25497841 25498146 -225189708 - AluSx SINE Alu -5 307 1 936 288 102 25 chr2 25498146 25498370 -225189484 + L1ME4a LINE L1 5741 5946 -224 479 230 54 7 chr2 25498601 25498749 -225189105 + L1ME4a LINE L1 5967 6121 0 180 0 0 0 chr2 25499083 25499103 -225188751 + (CCCCCA)n Simple_repeat Simple_repeat 3 22 0 889 187 0 35 chr2 25500183 25500354 -225187500 - FRAM SINE Alu -19 157 1 2154 118 20 0 chr2 25500585 25500881 -225186973 - AluSx SINE Alu -6 306 5 1920 151 6 19 chr2 25501311 25501623 -225186231 + AluJo SINE Alu 1 308 -4 2175 104 7 3 chr2 25502124 25502421 -225185433 - AluSq SINE Alu -13 300 3 2388 64 7 3 chr2 25502653 25502950 -225184904 - AluY SINE Alu -13 298 1 2157 83 3 64 chr2 25503137 25503450 -225184404 + AluSg SINE Alu 2 295 -15 2045 132 3 20 chr2 25503538 25503841 -225184013 + AluJo SINE Alu 1 298 -14 1816 159 23 7 chr2 25503900 25504201 -225183653 - AluJo SINE Alu -6 306 1 691 265 158 32 chr2 25504280 25504755 -225183099 + MLT1F LTR MaLR 1 535 -7 1899 130 58 0 chr2 25505044 25505336 -225182518 + AluSx SINE Alu 1 309 -3 2025 122 7 26 chr2 25505774 25506125 -225181729 - AluSx SINE Alu 0 312 1 2064 137 0 3 chr2 25506579 25506879 -225180975 - AluSc SINE Alu -10 299 1 251 171 0 0 chr2 25506884 25506925 -225180929 - Alu SINE Alu -9 293 253 319 282 96 53 chr2 25507169 25507357 -225180497 + MLT1H LTR MaLR 115 310 -239 235 229 19 105 chr2 25507454 25507559 -225180295 + MLT1H LTR MaLR 454 549 0 1876 168 27 0 chr2 25507585 25507883 -225179971 + AluJb SINE Alu 3 308 -4 2753 36 0 0 chr2 25507999 25508306 -225179548 + AluY SINE Alu 1 307 -4 2207 121 0 0 chr2 25508420 25508717 -225179137 - AluSq SINE Alu -16 297 1 2362 89 0 0 chr2 25508778 25509069 -225178785 + AluSx SINE Alu 1 291 -21 188 238 309 0 chr2 25509288 25509372 -225178482 + MIR3 SINE MIR 93 202 -6 2288 116 3 0 chr2 25509372 25509675 -225178179 - AluSq SINE Alu -9 304 1 1920 152 14 7 chr2 25509685 25509982 -225177872 - AluJb SINE Alu -13 299 1 343 275 243 0 chr2 25510116 25510396 -225177458 + L1ME4a LINE L1 5545 5892 -229 2175 116 3 16 chr2 25510499 25510802 -225177052 + AluSx SINE Alu 1 299 -13 1495 183 17 43 chr2 25510891 25511192 -225176662 - AluJo SINE Alu -19 293 1 720 146 0 0 chr2 25511210 25511320 -225176534 - HY1 scRNA scRNA -2 110 1 2600 48 0 0 chr2 25513878 25514171 -225173683 + AluY SINE Alu 1 293 -18 1017 151 11 16 chr2 25514171 25514356 -225173498 - L1MB3 LINE L1 -9 6174 5991 1082 152 29 82 chr2 25514839 25514897 -225172957 + AluJo SINE Alu 72 132 -180 2092 135 0 7 chr2 25514897 25515193 -225172661 - AluSx SINE Alu -18 294 1 1082 152 29 82 chr2 25515193 25515378 -225172476 + AluJo SINE Alu 132 302 -10 1775 155 14 7 chr2 25515387 25515683 -225172171 + AluJb SINE Alu 5 302 -10 29 0 0 0 chr2 25517114 25517143 -225170711 + AT_rich Low_complexity Low_complexity 1 29 0 2293 121 0 13 chr2 25517288 25517603 -225170251 + AluSq SINE Alu 1 311 -2 7551 112 21 28 chr2 25517712 25518288 -225169566 + Tigger1 DNA MER2_type 6 585 -1833 2348 114 0 0 chr2 25518288 25518596 -225169258 - AluSc SINE Alu -1 308 1 2271 93 14 0 chr2 25518596 25518887 -225168967 - AluSg SINE Alu -15 295 1 7551 112 21 28 chr2 25518887 25519185 -225168669 + Tigger1 DNA MER2_type 584 872 -1546 11194 43 11 35 chr2 25519185 25520594 -225167260 + SVA Other Other 7 1381 -5 7551 112 21 28 chr2 25520594 25520881 -225166973 + Tigger1 DNA MER2_type 872 1160 -1258 2491 79 0 0 chr2 25520881 25521184 -225166670 - AluY SINE Alu -8 303 1 1035 165 18 6 chr2 25521193 25521357 -225166497 - FAM SINE Alu -9 166 1 2310 94 7 3 chr2 25521383 25521681 -225166173 - AluSx SINE Alu -13 299 1 2474 75 0 0 chr2 25521687 25521982 -225165872 - AluSg SINE Alu -15 295 1 858 114 0 0 chr2 25521983 25522097 -225165757 + Tigger1 DNA MER2_type 2304 2417 -1 2050 122 30 7 chr2 25523012 25523315 -225164539 + AluSx SINE Alu 3 312 0 1633 229 125 77 chr2 25523738 25523953 -225163901 + L1M4 LINE L1 2953 3156 -2990 2357 72 0 13 chr2 25523953 25524260 -225163594 + AluY SINE Alu 1 303 -8 1733 161 0 75 chr2 25524270 25524416 -225163438 + AluJo SINE Alu 1 111 -201 2051 122 25 4 chr2 25524416 25524717 -225163137 + AluSx SINE Alu 1 307 0 1733 161 0 75 chr2 25524717 25524904 -225162950 + AluJo SINE Alu 111 310 -2 1633 229 125 77 chr2 25524904 25525231 -225162623 + L1M4 LINE L1 3164 3474 -2672 1763 158 11 11 chr2 25525231 25525515 -225162339 - AluJo SINE Alu -28 284 1 1633 229 125 77 chr2 25525515 25525558 -225162296 + L1M4 LINE L1 3474 3514 -2632 2221 81 0 0 chr2 25525558 25525831 -225162023 + AluSx SINE Alu 34 306 -6 1633 229 125 77 chr2 25525831 25526033 -225161821 + L1M4 LINE L1 3514 3791 -2355 965 185 0 36 chr2 25526102 25526297 -225161557 - LTR2B LTR ERV1 0 490 303 348 259 24 82 chr2 25526287 25526457 -225161397 - LTR2 LTR ERV1 -289 160 1 * 2178 185 25 0 chr2 25526459 25526865 -225160989 + L1M4 LINE L1 3781 4196 -1950 1900 185 42 45 chr2 25526901 25527092 -225160762 + MLT1C LTR MaLR 1 191 -276 2268 125 0 0 chr2 25527092 25527403 -225160451 + AluSx SINE Alu 1 311 -1 1900 185 42 45 chr2 25527403 25527494 -225160360 + MLT1C LTR MaLR 191 281 -186 2471 94 0 0 chr2 25527494 25527803 -225160051 + AluSq SINE Alu 1 309 -4 1900 185 42 45 chr2 25527803 25527968 -225159886 + MLT1C LTR MaLR 281 448 -19 530 101 0 38 chr2 25527970 25528049 -225159805 - AluSq/x SINE Alu -183 130 55 435 300 181 13 chr2 25528059 25528296 -225159558 + MLT1L LTR MaLR 1 277 -338 925 190 70 162 chr2 25528424 25528641 -225159213 - L2 LINE L2 -664 2650 2415 1868 153 30 3 chr2 25528641 25528941 -225158913 + AluJb SINE Alu 5 312 0 925 190 70 162 chr2 25528941 25529292 -225158562 - L2 LINE L2 -899 2415 2134 184 188 188 0 chr2 25529424 25529488 -225158366 - MIR SINE MIR -24 238 163 2227 120 0 0 chr2 25529752 25530052 -225157802 + AluSq SINE Alu 9 308 -5 336 82 2 0 chr2 25530065 25530112 -225157742 + Alu SINE Alu 2 43 -256 189 0 0 0 chr2 25530365 25530386 -225157468 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2151 118 0 0 chr2 25530388 25530667 -225157187 - AluSg SINE Alu -31 279 1 229 340 115 64 chr2 25530773 25531085 -225156769 + L2 LINE L2 2945 3272 0 2167 116 0 26 chr2 25531506 25531808 -225156046 + AluSx SINE Alu 1 294 -18 290 273 18 55 chr2 25532004 25532114 -225155740 + L2 LINE L2 3129 3234 -79 1813 112 51 40 chr2 25532190 25532489 -225155365 - AluSc SINE Alu 0 302 1 1740 123 9 86 chr2 25532494 25532819 -225155035 - AluJb SINE Alu -12 300 1 402 21 0 0 chr2 25533685 25533732 -225154122 + (TG)n Simple_repeat Simple_repeat 2 48 0 332 286 16 40 chr2 25534195 25534321 -225153533 + MIR SINE MIR 29 151 -111 252 253 88 11 chr2 25534813 25534904 -225152950 + MIR SINE MIR 153 250 -12 210 388 10 0 chr2 25534915 25535013 -225152841 - L2 LINE L2 -13 3300 3202 1037 161 13 61 chr2 25535180 25535410 -225152444 + MER20 DNA MER1_type 1 219 0 195 42 0 0 chr2 25536025 25536049 -225151805 + (GA)n Simple_repeat Simple_repeat 2 25 0 575 65 39 0 chr2 25536336 25536413 -225151441 - MADE1 DNA Mariner 0 80 1 7156 49 20 33 chr2 25536770 25538281 -225149573 - SVA Other Other -799 1380 47 339 329 52 0 chr2 25539302 25539457 -225148397 + MIR SINE MIR 50 212 -50 216 0 0 0 chr2 25539667 25539691 -225148163 + (A)n Simple_repeat Simple_repeat 1 24 0 1341 229 93 14 chr2 25539761 25539974 -225147880 - MSTD LTR MaLR 0 396 201 1666 161 0 51 chr2 25539974 25540285 -225147569 - AluJo SINE Alu -17 295 1 1341 229 93 14 chr2 25540285 25540438 -225147416 - MSTD LTR MaLR -195 201 1 3917 51 4 0 chr2 25541089 25541562 -225146292 - L1PA6 LINE L1 0 6154 5680 1376 194 127 53 chr2 25542152 25542173 -225145681 - Charlie1 DNA MER1_type -696 2065 2047 351 0 0 0 chr2 25542173 25542212 -225145642 + (TG)n Simple_repeat Simple_repeat 2 40 0 1376 194 127 53 chr2 25542212 25542359 -225145495 - Charlie1 DNA MER1_type -714 2047 1912 2441 84 0 10 chr2 25542359 25542667 -225145187 - AluSx SINE Alu -5 307 3 1376 194 127 53 chr2 25542667 25542914 -225144940 - Charlie1 DNA MER1_type -849 1912 1618 2344 87 0 0 chr2 25542923 25543234 -225144620 + AluY SINE Alu 1 311 0 804 273 18 7 chr2 25543283 25543561 -225144293 + L1ME1 LINE L1 2910 3190 -2956 2925 220 103 48 chr2 25543573 25544485 -225143369 + L1ME1 LINE L1 3815 4800 -1346 2064 99 11 21 chr2 25544485 25544767 -225143087 + AluSg SINE Alu 6 284 -26 2925 220 103 48 chr2 25544767 25544965 -225142889 + L1ME1 LINE L1 4800 4986 -1160 2659 200 154 14 chr2 25544970 25545685 -225142169 + L1ME1 LINE L1 5340 6311 -23 2075 117 7 10 chr2 25545685 25545975 -225141879 - AluSq SINE Alu -24 289 1 1215 196 26 0 chr2 25546076 25546305 -225141549 - AluJo SINE Alu -20 292 58 2752 140 137 17 chr2 25546607 25547185 -225140669 - L1MB3 LINE L1 -11 6172 5526 1308 211 261 8 chr2 25547197 25547675 -225140179 - L1MB3 LINE L1 -807 5339 4741 22 0 0 0 chr2 25548187 25548209 -225139645 + AT_rich Low_complexity Low_complexity 1 22 0 248 282 90 0 chr2 25550156 25550234 -225137620 + L2 LINE L2 3229 3313 0 25 31 0 0 chr2 25552304 25552336 -225135518 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 25553501 25553522 -225134332 + AT_rich Low_complexity Low_complexity 1 21 0 233 148 19 37 chr2 25554754 25554808 -225133046 + A-rich Low_complexity Low_complexity 2 54 0 405 0 0 0 chr2 25559067 25559112 -225128742 + (CA)n Simple_repeat Simple_repeat 1 45 0 183 306 41 31 chr2 25559233 25559331 -225128523 + MER5B DNA MER1_type 1 99 -79 2098 125 0 7 chr2 25559348 25559644 -225128210 - AluSg SINE Alu -16 294 1 2378 96 6 6 chr2 25559765 25560077 -225127777 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 25560248 25560269 -225127585 + AT_rich Low_complexity Low_complexity 1 21 0 221 290 0 0 chr2 25560614 25560683 -225127171 + A-rich Low_complexity Low_complexity 3 71 0 1392 144 20 48 chr2 25561032 25561342 -225126512 + MER2 DNA MER2_type 1 345 0 1815 140 9 65 chr2 25562018 25562340 -225125514 + AluSg SINE Alu 1 304 -6 2190 92 7 24 chr2 25562357 25562649 -225125205 + AluSx SINE Alu 10 296 -16 762 256 116 0 chr2 25564699 25564906 -225122948 + MIR SINE MIR 32 262 0 1911 170 20 0 chr2 25565489 25565795 -225122059 + AluJb SINE Alu 1 312 0 1740 163 42 7 chr2 25565920 25566203 -225121651 - AluJb SINE Alu -19 293 1 2173 112 13 3 chr2 25566697 25567002 -225120852 + AluSq SINE Alu 1 308 -5 2120 96 24 10 chr2 25567103 25567395 -225120459 - AluSp SINE Alu -17 296 1 186 103 0 0 chr2 25567533 25567562 -225120292 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 309 280 27 75 chr2 25569307 25569493 -225118361 + MER5B DNA MER1_type 1 177 -1 248 224 13 0 chr2 25569622 25569698 -225118156 + L1MB7 LINE L1 6108 6184 0 317 326 11 0 chr2 25569821 25569910 -225117944 + MER5A DNA MER1_type 50 139 -50 24 67 0 0 chr2 25570320 25570365 -225117489 + AT_rich Low_complexity Low_complexity 1 45 0 279 79 0 0 chr2 25570585 25570623 -225117231 + (A)n Simple_repeat Simple_repeat 1 38 0 814 264 42 5 chr2 25570783 25570999 -225116855 - MER58A DNA MER1_type 0 224 1 255 323 87 24 chr2 25571053 25571180 -225116674 - L3 LINE CR1 -103 1474 1340 1991 80 0 112 chr2 25571488 25571826 -225116028 + AluSg SINE Alu 1 300 0 326 254 0 0 chr2 25571849 25571912 -225115942 + L3 LINE CR1 1507 1569 -8 180 0 0 0 chr2 25572053 25572073 -225115781 + (A)n Simple_repeat Simple_repeat 1 20 0 208 266 53 43 chr2 25572583 25572677 -225115177 - MIR3 SINE MIR -15 193 99 2244 108 0 0 chr2 25573090 25573386 -225114468 - AluSx SINE Alu -16 296 1 29 28 0 0 chr2 25574306 25574342 -225113512 + AT_rich Low_complexity Low_complexity 1 36 0 226 250 54 9 chr2 25574351 25574463 -225113391 + L1MC/D LINE L1 5217 5333 -813 357 255 156 82 chr2 25574521 25574752 -225113102 + L1MC/D LINE L1 5412 5659 -2149 560 309 100 31 chr2 25574771 25575121 -225112733 + L1MEd LINE L1 586 959 -5160 386 315 67 30 chr2 25575278 25575524 -225112330 + L1MEd LINE L1 1012 1282 -4849 2410 67 3 0 chr2 25575524 25575824 -225112030 + AluY SINE Alu 1 301 -10 386 315 67 30 chr2 25575824 25576009 -225111845 + L1MEd LINE L1 1282 1459 -4672 2226 120 3 0 chr2 25576515 25576824 -225111030 + AluSx SINE Alu 1 310 -2 328 276 126 36 chr2 25576883 25577303 -225110551 + L1MEd LINE L1 2114 2571 -3558 2302 84 0 20 chr2 25577335 25577634 -225110220 + AluSg SINE Alu 1 293 -17 970 195 81 5 chr2 25577799 25578020 -225109834 - MIR SINE MIR -21 241 4 390 181 23 90 chr2 25578064 25578197 -225109657 + L1MEd LINE L1 2805 2928 -3201 341 298 5 58 chr2 25578358 25578460 -225109394 - L1MC4a LINE L1 -1927 5881 5792 1378 99 43 52 chr2 25578460 25578692 -225109162 + MER30 DNA MER1_type 1 230 0 341 298 5 58 chr2 25578692 25578777 -225109077 - L1MC4a LINE L1 -2016 5792 5704 2328 73 10 3 chr2 25579335 25579638 -225108216 + AluY SINE Alu 1 305 -6 242 342 45 18 chr2 25579896 25580007 -225107847 + L2 LINE L2 3192 3305 -8 22 0 0 0 chr2 25580115 25580137 -225107717 + AT_rich Low_complexity Low_complexity 1 22 0 620 299 76 23 chr2 25580207 25580639 -225107215 - HAL1 LINE L1 -933 1574 1120 445 279 73 59 chr2 25580791 25580995 -225106859 - HAL1 LINE L1 -1877 630 424 1388 155 4 4 chr2 25582443 25582669 -225105185 - AluJb SINE Alu -20 292 67 22 0 0 0 chr2 25582768 25582790 -225105064 + AT_rich Low_complexity Low_complexity 1 22 0 192 97 0 0 chr2 25582962 25582993 -225104861 + (CTG)n Simple_repeat Simple_repeat 2 32 0 448 36 0 0 chr2 25583152 25583208 -225104646 + U2 snRNA snRNA 2 57 -131 983 142 0 13 chr2 25584329 25584484 -225103370 - AluSx SINE Alu -3 309 157 613 103 0 11 chr2 25584485 25584572 -225103282 - AluSx SINE Alu -226 86 1 1922 114 111 0 chr2 25584604 25584884 -225102970 + AluSp SINE Alu 1 311 -2 335 206 10 39 chr2 25584894 25584996 -225102858 + L1MEd LINE L1 3835 3933 -2196 2172 101 14 3 chr2 25585087 25585374 -225102480 + AluSc SINE Alu 1 290 -19 21 0 0 0 chr2 25586414 25586435 -225101419 + AT_rich Low_complexity Low_complexity 1 21 0 2256 105 13 0 chr2 25586582 25586888 -225100966 + AluSp SINE Alu 1 310 -3 2289 92 3 0 chr2 25587058 25587352 -225100502 + AluSx SINE Alu 1 295 -17 2511 63 0 3 chr2 25587515 25587816 -225100038 + AluY SINE Alu 1 300 -11 1946 136 25 0 chr2 25587886 25588172 -225099682 + AluSx SINE Alu 1 293 -19 1200 113 11 0 chr2 25588227 25588404 -225099450 + L1PA15 LINE L1 5981 6159 -6 26 0 0 0 chr2 25588457 25588483 -225099371 + AT_rich Low_complexity Low_complexity 1 26 0 550 276 121 22 chr2 25588516 25589197 -225098657 - L1ME3 LINE L1 -154 6008 5258 1633 107 71 119 chr2 25589221 25589260 -225098594 + THE1C LTR MaLR 1 40 -335 2406 97 0 0 chr2 25589260 25589559 -225098295 - AluSq SINE Alu -14 299 1 1633 107 71 119 chr2 25589559 25589913 -225097941 + THE1C LTR MaLR 40 375 0 322 278 8 8 chr2 25590008 25590134 -225097720 - L1ME3 LINE L1 -1043 5103 4978 2303 194 92 19 chr2 25590202 25590819 -225097035 - L1MB7 LINE L1 -58 6126 5465 1176 178 9 14 chr2 25591233 25591446 -225096408 - AluJo SINE Alu -25 287 76 234 145 17 48 chr2 25591490 25591731 -225096123 + AluJb SINE Alu 1 296 -6 21 0 0 0 chr2 25591817 25591838 -225096016 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 25592053 25592082 -225095772 + AT_rich Low_complexity Low_complexity 1 29 0 273 271 176 0 chr2 25592115 25592200 -225095654 - MIR SINE MIR -111 151 52 859 237 173 39 chr2 25592236 25592675 -225095179 + MLT1D LTR MaLR 8 505 0 474 262 40 25 chr2 25592801 25593003 -225094851 - L1MC4 LINE L1 -1048 6994 6790 251 280 10 50 chr2 25593017 25593129 -225094725 - L1MC5 LINE L1 -1225 6770 6637 2212 109 3 31 chr2 25593207 25593529 -225094325 - AluSq SINE Alu 0 313 1 1945 121 68 0 chr2 25594002 25594282 -225093572 - AluSq SINE Alu -14 299 1 285 163 0 0 chr2 25594349 25594398 -225093456 - Alu SINE Alu -4 304 256 540 296 43 27 chr2 25594424 25594597 -225093257 - L1MC5 LINE L1 -1939 5869 5689 705 260 44 0 chr2 25594597 25594778 -225093076 + MER5A DNA MER1_type 1 189 0 540 296 43 27 chr2 25594778 25594861 -225092993 - L1MC5 LINE L1 -2119 5689 5609 2009 72 12 0 chr2 25594937 25595186 -225092668 + AluY SINE Alu 1 252 -59 192 77 0 0 chr2 25595191 25595217 -225092637 + (A)n Simple_repeat Simple_repeat 1 26 0 858 174 13 0 chr2 25595381 25595553 -225092301 + AluSq SINE Alu 134 307 0 235 89 0 44 chr2 25595685 25595730 -225092124 - AluJo SINE Alu -1 301 259 1012 160 68 48 chr2 25595730 25595802 -225092052 - AluJo SINE Alu -90 222 153 2046 100 24 3 chr2 25595802 25596092 -225091762 - AluSg SINE Alu -14 296 1 1012 160 68 48 chr2 25596092 25596225 -225091629 - AluJo SINE Alu -159 153 13 256 287 6 96 chr2 25596257 25596394 -225091460 - L1 LINE L1 -1896 4250 4139 2141 115 0 3 chr2 25596394 25596702 -225091152 + AluSx SINE Alu 1 307 0 256 287 6 96 chr2 25596702 25596792 -225091062 - L1 LINE L1 -2007 4139 4042 2286 105 0 10 chr2 25596977 25597290 -225090564 + AluSx SINE Alu 1 310 -2 312 266 83 41 chr2 25597607 25597776 -225090078 - L1 LINE L1 -2975 3171 2996 1605 155 40 34 chr2 25597778 25597905 -225089949 + AluJb SINE Alu 1 126 -186 2149 104 0 0 chr2 25597905 25598231 -225089623 + AluSg SINE Alu 1 326 0 1605 155 40 34 chr2 25598231 25598399 -225089455 + AluJb SINE Alu 126 299 -13 1613 245 44 13 chr2 25598599 25599052 -225088802 - MLT1C LTR MaLR 0 467 1 1837 146 4 0 chr2 25599342 25599652 -225088202 - AluSx SINE Alu 0 315 5 2041 136 3 3 chr2 25599685 25599979 -225087875 - AluSx SINE Alu -18 294 1 446 270 132 65 chr2 25600107 25600372 -225087482 + L1M4 LINE L1 3740 3986 -2160 2324 101 0 0 chr2 25600372 25600670 -225087184 - AluSc SINE Alu -11 298 1 446 270 132 65 chr2 25600670 25600702 -225087152 + L1M4 LINE L1 3986 4014 -2132 2105 132 0 7 chr2 25600702 25601005 -225086849 + AluSx SINE Alu 1 301 -11 446 270 132 65 chr2 25601005 25601250 -225086604 + L1M4 LINE L1 4014 4316 -1830 1121 265 56 36 chr2 25601250 25601696 -225086158 + LTR40c LTR ERVL 5 459 -6 918 247 114 42 chr2 25601705 25602389 -225085465 + L1M4 LINE L1 4301 5033 -1113 959 256 118 4 chr2 25602492 25603041 -225084813 - L1M1 LINE L1 -495 5667 5155 376 253 50 68 chr2 25603069 25603290 -225084564 - L1M4 LINE L1 -1386 4760 4544 423 260 95 18 chr2 25603548 25603717 -225084137 + L1ME3A LINE L1 5952 6133 -37 1061 165 55 5 chr2 25603725 25603943 -225083911 + MER46A DNA MER2_type 1 229 -7 238 273 50 40 chr2 25603957 25604056 -225083798 + L1ME3A LINE L1 5910 6009 -161 257 188 109 31 chr2 25604269 25604333 -225083521 + MER5C DNA MER1_type 56 124 -200 212 266 38 0 chr2 25604507 25604586 -225083268 + A-rich Low_complexity Low_complexity 1 82 0 1831 180 23 0 chr2 25604923 25605228 -225082626 - AluJo SINE Alu 0 312 1 2230 98 0 3 chr2 25605338 25605634 -225082220 + AluSg SINE Alu 1 295 -15 2019 130 0 17 chr2 25606140 25606433 -225081421 - AluJo SINE Alu -24 288 1 2281 102 0 10 chr2 25606732 25607037 -225080817 - AluSx SINE Alu -10 302 1 1879 128 72 0 chr2 25607102 25607392 -225080462 + AluSx SINE Alu 1 311 -1 28 0 0 0 chr2 25609908 25609936 -225077918 + AT_rich Low_complexity Low_complexity 1 28 0 315 164 0 30 chr2 25610931 25610998 -225076856 - MER3 DNA MER1_type -4 205 141 3182 159 35 26 chr2 25611002 25611300 -225076554 + L1MC1 LINE L1 4924 5218 -1115 2293 102 0 0 chr2 25611300 25611604 -225076250 + AluSg SINE Alu 5 308 -2 3182 159 35 26 chr2 25611604 25612172 -225075682 + L1MC1 LINE L1 5218 5799 -534 1883 99 21 0 chr2 25612186 25612468 -225075386 + L1PA13 LINE L1 5876 6163 0 2687 135 50 28 chr2 25612469 25612613 -225075241 + L1MC1 LINE L1 5816 5955 -378 2249 110 0 0 chr2 25612613 25612904 -225074950 + AluSq SINE Alu 1 291 -22 2687 135 50 28 chr2 25612904 25613254 -225074600 + L1MC1 LINE L1 5955 6321 -12 553 218 8 38 chr2 25613266 25613399 -225074455 - MER3 DNA MER1_type -80 129 1 834 159 7 21 chr2 25613994 25614139 -225073715 + FLAM_C SINE Alu 1 143 0 1723 162 13 26 chr2 25614143 25614445 -225073409 + AluJb SINE Alu 1 298 -14 613 269 122 46 chr2 25614761 25614999 -225072855 + MIR SINE MIR 6 261 -1 1892 150 3 29 chr2 25615060 25615366 -225072488 - AluJb SINE Alu -14 298 1 255 292 0 34 chr2 25616509 25616598 -225071256 + MER21B LTR ERV1 1 86 -777 329 293 0 0 chr2 25616623 25616698 -225071156 + MER21B LTR ERV1 20 94 -769 2975 176 64 41 chr2 25616699 25616980 -225070874 + MER21B LTR ERV1 48 321 -542 2159 105 0 3 chr2 25616980 25617265 -225070589 + AluSx SINE Alu 1 284 -28 333 0 0 0 chr2 25617265 25617302 -225070552 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 2975 176 64 41 chr2 25617302 25617679 -225070175 + MER21B LTR ERV1 320 722 -141 1741 156 13 13 chr2 25617679 25617987 -225069867 - MER1B DNA MER1_type 0 339 32 536 204 117 0 chr2 25617990 25618127 -225069727 + MER21B LTR ERV1 710 862 -1 434 335 56 14 chr2 25619168 25619383 -225068471 + ERVL LTR ERVL 4851 5074 -690 1854 183 3 0 chr2 25619383 25619694 -225068160 + AluSx SINE Alu 1 312 0 2008 112 36 0 chr2 25619852 25620130 -225067724 + AluSx SINE Alu 1 288 -24 1454 197 3 43 chr2 25620776 25620921 -225066933 + AluJo SINE Alu 1 129 -183 1726 177 3 0 chr2 25620921 25621215 -225066639 + AluJb SINE Alu 1 295 -17 1454 197 3 43 chr2 25621215 25621373 -225066481 + AluJo SINE Alu 129 292 -20 381 269 219 0 chr2 25621849 25622009 -225065845 + MLT1K LTR MaLR 359 553 -35 2194 94 0 0 chr2 25622084 25622359 -225065495 + AluSx SINE Alu 1 275 -37 203 0 0 36 chr2 25622363 25622391 -225065463 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 350 321 70 27 chr2 25622413 25622600 -225065254 + MIR SINE MIR 20 214 -48 1956 130 3 7 chr2 25622967 25623293 -225064561 - AluSx SINE Alu 0 325 1 32 43 0 0 chr2 25624222 25624268 -225063586 + AT_rich Low_complexity Low_complexity 1 46 0 347 267 61 8 chr2 25625140 25625271 -225062583 + MLT1K LTR MaLR 10 147 -441 324 0 0 0 chr2 25625303 25625339 -225062515 + (CA)n Simple_repeat Simple_repeat 2 37 0 2092 128 3 0 chr2 25625652 25625948 -225061906 - AluSx SINE Alu -15 297 1 453 278 108 45 chr2 25628180 25628263 -225059591 + L1MB7 LINE L1 4968 5044 -1120 1595 145 83 25 chr2 25628263 25628372 -225059482 + AluJb SINE Alu 3 104 -208 405 0 0 0 chr2 25628372 25628417 -225059437 + (CA)n Simple_repeat Simple_repeat 2 46 0 1595 145 83 25 chr2 25628417 25628608 -225059246 + AluJb SINE Alu 104 312 0 453 278 108 45 chr2 25628608 25628966 -225058888 + L1MB7 LINE L1 5044 5449 -715 230 119 24 0 chr2 25629000 25629042 -225058812 + L1MC4a LINE L1 7649 7691 -117 23 33 0 0 chr2 25629049 25629079 -225058775 + AT_rich Low_complexity Low_complexity 1 30 0 2132 114 7 10 chr2 25629079 25629369 -225058485 - AluSx SINE Alu -23 289 1 532 207 16 0 chr2 25629369 25629490 -225058364 + L1MD2 LINE L1 6221 6343 -16 2092 121 3 7 chr2 25629497 25629802 -225058052 + AluSq SINE Alu 6 309 -4 319 281 65 78 chr2 25629806 25630112 -225057742 + L1MB7 LINE L1 5480 5781 -2027 404 312 64 0 chr2 25630191 25630316 -225057538 - MIR SINE MIR -74 188 56 1071 246 74 3 chr2 25630592 25630901 -225056953 - MER46C DNA MER2_type 0 338 8 2557 58 0 0 chr2 25631084 25631392 -225056462 + AluY SINE Alu 1 308 -3 248 194 113 16 chr2 25632198 25632260 -225055594 + MIR SINE MIR 84 151 -111 196 278 129 48 chr2 25632423 25632632 -225055222 + L2 LINE L2 2648 2873 -441 304 327 159 9 chr2 25632964 25633184 -225054670 + MLT1K LTR MaLR 336 588 0 815 196 72 0 chr2 25633415 25633568 -225054286 + AluSg/x SINE Alu 132 295 -15 509 212 133 35 chr2 25634047 25634158 -225053696 + HAL1b LINE L1 429 528 -820 2039 128 14 0 chr2 25634158 25634447 -225053407 + AluSx SINE Alu 1 293 -19 509 212 133 35 chr2 25634447 25634561 -225053293 + HAL1b LINE L1 528 676 -672 2082 113 0 7 chr2 25635554 25635837 -225052017 + AluSx SINE Alu 15 295 -17 386 185 146 54 chr2 25635901 25636106 -225051748 + L1MC4 LINE L1 7001 7224 -818 1557 238 145 17 chr2 25636106 25636622 -225051232 + MLT1E LTR MaLR 1 582 -11 2087 207 124 49 chr2 25636630 25637216 -225050638 + L1MC4 LINE L1 7221 7762 -280 198 0 0 0 chr2 25637216 25637238 -225050616 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1718 154 11 28 chr2 25637240 25637526 -225050328 - AluJo SINE Alu -31 281 1 2087 207 124 49 chr2 25637526 25637686 -225050168 + L1MC4 LINE L1 7762 8026 -16 694 232 165 14 chr2 25637765 25638052 -225049802 + L1MB7 LINE L1 5810 6141 -43 1663 175 7 48 chr2 25638054 25638196 -225049658 + AluJo SINE Alu 1 147 -165 2152 88 6 41 chr2 25638196 25638515 -225049339 + AluSp SINE Alu 1 308 -5 1663 175 7 48 chr2 25638515 25638681 -225049173 + AluJo SINE Alu 147 296 -16 236 163 41 0 chr2 25638734 25638783 -225049071 + L1MB7 LINE L1 6134 6184 0 713 135 18 0 chr2 25638792 25638903 -225048951 + AluSq/x SINE Alu 1 113 -200 22 70 0 0 chr2 25641505 25641548 -225046306 + AT_rich Low_complexity Low_complexity 1 43 0 192 77 0 0 chr2 25641780 25641806 -225046048 + (CA)n Simple_repeat Simple_repeat 1 26 0 2645 137 72 14 chr2 25642611 25643128 -225044726 - L1MB2 LINE L1 -2 6169 5623 204 265 73 0 chr2 25643590 25643658 -225044196 - L3 LINE CR1 -297 1280 1208 216 0 0 0 chr2 25644069 25644093 -225043761 + (A)n Simple_repeat Simple_repeat 1 24 0 1365 172 73 40 chr2 25644135 25644437 -225043417 - AluJo SINE Alu 0 312 1 25 31 0 0 chr2 25644444 25644476 -225043378 + AT_rich Low_complexity Low_complexity 1 32 0 2219 101 3 10 chr2 25645529 25645837 -225042017 + AluSp SINE Alu 1 306 -7 2244 115 0 3 chr2 25645849 25646154 -225041700 + AluSg SINE Alu 1 304 -6 181 284 95 40 chr2 25646182 25646256 -225041598 + MIR SINE MIR 16 93 -115 675 245 7 0 chr2 25646408 25646559 -225041295 + AluJo SINE Alu 123 274 -38 282 56 0 0 chr2 25646583 25646619 -225041235 + (CA)n Simple_repeat Simple_repeat 2 37 0 2720 213 124 72 chr2 25647071 25647655 -225040199 + L1MDb LINE L1 311 863 -5543 2105 123 20 0 chr2 25647655 25647948 -225039906 + AluSx SINE Alu 1 299 -13 2720 213 124 72 chr2 25647948 25648343 -225039511 + L1MDb LINE L1 863 1236 -5170 1932 128 60 0 chr2 25648343 25648625 -225039229 + AluSx SINE Alu 1 299 -13 2720 213 124 72 chr2 25648625 25648684 -225039170 + L1MDb LINE L1 1236 1291 -5115 1776 167 28 3 chr2 25648684 25648972 -225038882 + AluJb SINE Alu 1 295 -17 2720 213 124 72 chr2 25648972 25649923 -225037931 + L1MDb LINE L1 1291 2508 -3898 2425 214 80 21 chr2 25649923 25650587 -225037267 + L1MD2 LINE L1 5575 6277 -82 278 163 0 0 chr2 25650651 25650700 -225037154 + MLT1K LTR MaLR 3 51 -537 2211 129 0 3 chr2 25650718 25651013 -225036841 + AluSx SINE Alu 1 294 -18 2166 131 0 0 chr2 25651376 25651688 -225036166 + AluSx SINE Alu 1 312 0 27 0 0 0 chr2 25651737 25651764 -225036090 + AT_rich Low_complexity Low_complexity 1 27 0 2181 112 0 7 chr2 25652134 25652430 -225035424 - AluSx SINE Alu -18 294 1 530 146 37 0 chr2 25653445 25653527 -225034327 + FLAM SINE Alu 43 127 -16 22 0 0 0 chr2 25654844 25654866 -225032988 + AT_rich Low_complexity Low_complexity 1 22 0 1549 154 8 0 chr2 25654875 25655109 -225032745 + AluJb SINE Alu 1 236 -76 1470 136 125 52 chr2 25655140 25655427 -225032427 + AluJb SINE Alu 1 308 -4 320 196 0 56 chr2 25655640 25655747 -225032107 + LTR41 LTR ERVL 662 762 -11 997 68 0 23 chr2 25656921 25657054 -225030800 - AluJb SINE Alu -7 305 176 860 183 0 0 chr2 25657195 25657337 -225030517 - FLAM_C SINE Alu -1 142 1 22 70 0 0 chr2 25657481 25657524 -225030330 + AT_rich Low_complexity Low_complexity 1 43 0 2303 157 37 5 chr2 25657671 25658104 -225029750 - L1MB4 LINE L1 -7 6173 5727 1670 159 21 14 chr2 25658322 25658612 -225029242 + AluJb SINE Alu 1 292 -20 2328 102 0 16 chr2 25658872 25659008 -225028846 + AluSq SINE Alu 2 139 -174 2160 69 0 0 chr2 25659008 25659269 -225028585 + AluY SINE Alu 37 297 -14 2328 102 0 16 chr2 25659269 25659447 -225028407 + AluSq SINE Alu 139 311 -2 575 100 0 0 chr2 25659879 25659959 -225027895 - AluS SINE Alu -233 80 1 204 67 0 0 chr2 25660002 25660032 -225027822 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 333 118 0 0 chr2 25660033 25660049 -225027805 + (TG)n Simple_repeat Simple_repeat 1 67 0 333 118 0 0 chr2 25660049 25660100 -225027754 + (TG)n Simple_repeat Simple_repeat 2 52 0 2091 114 0 49 chr2 25660119 25660325 -225027529 - AluSx SINE Alu -3 309 123 2294 82 0 10 chr2 25660325 25660628 -225027226 + AluY SINE Alu 1 300 -11 2091 114 0 49 chr2 25660628 25660746 -225027108 - AluSx SINE Alu -189 123 1 949 187 12 0 chr2 25660982 25661148 -225026706 + FAM SINE Alu 1 49 0 338 285 30 22 chr2 25661245 25661413 -225026441 - MER20B DNA MER1_type -4 215 43 2052 137 16 0 chr2 25661606 25661912 -225025942 + AluSx SINE Alu 1 311 -1 1421 211 39 0 chr2 25661957 25662242 -225025612 - AluJo SINE Alu -16 296 1 25 31 0 0 chr2 25662749 25662781 -225025073 + AT_rich Low_complexity Low_complexity 1 32 0 29 78 0 0 chr2 25662881 25662945 -225024909 + AT_rich Low_complexity Low_complexity 1 64 0 239 292 41 59 chr2 25663181 25663464 -225024390 + L1MDa LINE L1 21 576 -5954 2293 112 0 7 chr2 25663669 25663972 -225023882 + AluSx SINE Alu 1 301 -11 928 169 39 0 chr2 25663972 25664126 -225023728 + AluSg/x SINE Alu 132 291 -19 363 273 72 24 chr2 25664127 25664336 -225023518 + L1MDa LINE L1 1070 1288 -5255 194 224 90 30 chr2 25664407 25664474 -225023380 - MIR SINE MIR -158 104 34 252 234 16 16 chr2 25664833 25664897 -225022957 + L2 LINE L2 2310 2373 -941 504 238 104 0 chr2 25665053 25665217 -225022637 + L1MC5 LINE L1 7720 7900 -61 2073 91 0 7 chr2 25665646 25665960 -225021894 + AluY SINE Alu 1 312 0 1994 128 3 0 chr2 25666069 25666365 -225021489 + AluSq SINE Alu 1 297 -16 1628 154 0 47 chr2 25666461 25666779 -225021075 + AluSx SINE Alu 1 303 -9 1515 141 0 4 chr2 25666780 25667014 -225020840 - AluJb SINE Alu -12 300 68 808 161 8 0 chr2 25667014 25667144 -225020710 - AluJo/FLAM SINE Alu -181 131 1 1759 179 113 136 chr2 25667266 25668170 -225019684 - L1MC5 LINE L1 -30 7931 7051 2004 113 26 22 chr2 25668170 25668481 -225019373 + AluSq SINE Alu 1 312 -1 1759 179 113 136 chr2 25668481 25668569 -225019285 - L1MC5 LINE L1 -910 7051 6962 1303 143 0 31 chr2 25668996 25669219 -225018635 + AluSg/x SINE Alu 81 296 -14 412 336 125 19 chr2 25669894 25670310 -225017544 - L2 LINE L2 -1110 2204 1745 265 281 210 27 chr2 25670655 25670879 -225016975 + L2 LINE L2 1946 2210 -1104 993 111 0 76 chr2 25670941 25671113 -225016741 - FRAM SINE Alu -17 159 1 799 235 36 25 chr2 25671580 25671776 -225016078 - MIR SINE MIR -2 260 63 291 232 63 42 chr2 25671779 25671874 -225015980 + HERVL LTR ERVL 4203 4299 -1355 331 322 101 0 chr2 25671993 25672151 -225015703 + HERVL LTR ERVL 5177 5343 -142 978 106 0 7 chr2 25672664 25672835 -225015019 - AluSg/x SINE Alu 0 308 139 2177 99 3 7 chr2 25672838 25673140 -225014714 - AluSx SINE Alu -11 301 1 189 0 0 0 chr2 25673145 25673166 -225014688 + (T)n Simple_repeat Simple_repeat 1 21 0 423 292 82 31 chr2 25673885 25674151 -225013703 - MLT1J LTR MaLR -119 331 64 856 271 43 60 chr2 25674287 25674637 -225013217 + L2 LINE L2 2876 3219 -94 644 152 0 0 chr2 25674638 25674763 -225013091 - AluSg/x SINE Alu 0 316 192 514 152 0 54 chr2 25674766 25674858 -225012996 + L2 LINE L2 3212 3298 -15 21 36 0 0 chr2 25675005 25675033 -225012821 + AT_rich Low_complexity Low_complexity 1 28 0 2058 106 7 7 chr2 25675229 25675532 -225012322 + AluSc SINE Alu 5 307 -2 189 171 0 0 chr2 25675536 25675571 -225012283 + A-rich Low_complexity Low_complexity 1 35 0 618 126 0 0 chr2 25675593 25675680 -225012174 + FRAM SINE Alu 75 161 -15 731 193 31 68 chr2 25675680 25675768 -225012086 + L2 LINE L2 3129 3219 -94 1828 139 20 14 chr2 25675768 25676063 -225011791 - AluSx SINE Alu -15 297 1 731 193 31 68 chr2 25676063 25676166 -225011688 + L2 LINE L2 3219 3313 0 443 256 74 78 chr2 25676186 25676455 -225011399 - MLT1J LTR MaLR -241 270 3 1992 101 42 3 chr2 25676500 25676788 -225011066 - AluSq SINE Alu -14 299 1 2138 114 0 9 chr2 25676850 25677165 -225010689 + AluSx SINE Alu 1 312 0 793 165 0 8 chr2 25677218 25677351 -225010503 - FLAM_A SINE Alu -1 132 1 2133 105 0 10 chr2 25678185 25678498 -225009356 - AluSx SINE Alu -2 310 1 207 326 184 31 chr2 25678660 25678856 -225008998 + MIR SINE MIR 3 228 -34 2062 112 10 0 chr2 25679170 25679464 -225008390 - AluSq SINE Alu -16 297 1 2142 113 0 0 chr2 25679821 25680121 -225007733 - AluSx SINE Alu -12 300 1 24 0 0 0 chr2 25680381 25680405 -225007449 + AT_rich Low_complexity Low_complexity 1 24 0 234 128 0 0 chr2 25680661 25680700 -225007154 + (CA)n Simple_repeat Simple_repeat 2 40 0 204 179 0 0 chr2 25682497 25682536 -225005318 + (CA)n Simple_repeat Simple_repeat 1 39 0 2192 93 3 7 chr2 25683254 25683554 -225004300 - AluSx SINE Alu -13 299 1 484 275 67 7 chr2 25683554 25683703 -225004151 + MIR SINE MIR 91 248 -14 1994 128 10 3 chr2 25683864 25684169 -225003685 - AluSx SINE Alu -3 309 3 1564 122 106 0 chr2 25684573 25684819 -225003035 + AluSx SINE Alu 1 272 -40 200 227 0 15 chr2 25684819 25684875 -225002979 + GA-rich Low_complexity Low_complexity 12 68 0 246 193 0 35 chr2 25685407 25685464 -225002390 + LTR54 LTR ERV1 402 456 -54 1807 147 17 0 chr2 25685468 25685760 -225002094 - AluSx SINE Alu -15 297 1 2024 111 7 17 chr2 25685775 25686072 -225001782 - AluSx SINE Alu -18 294 1 222 223 69 56 chr2 25686102 25686181 -225001673 + MIR SINE MIR 51 130 -78 417 248 18 9 chr2 25686825 25686938 -225000916 - MIR SINE MIR -129 133 20 498 254 176 8 chr2 25687032 25687276 -225000578 + L1ME LINE L1 5450 5734 -436 491 211 66 26 chr2 25687331 25687483 -225000371 - L1ME4a LINE L1 -17 6104 5947 850 157 0 0 chr2 25687500 25687634 -225000220 + AluJo SINE Alu 1 134 -178 1949 95 0 41 chr2 25687722 25688045 -224999809 - AluSc SINE Alu 0 311 1 454 210 76 112 chr2 25688059 25688179 -224999675 - L1ME4a LINE L1 -303 5818 5708 1659 176 17 0 chr2 25688179 25688469 -224999385 + AluJo SINE Alu 1 295 -17 454 210 76 112 chr2 25688469 25688572 -224999282 - L1ME4a LINE L1 -413 5708 5603 2161 119 0 0 chr2 25688576 25688879 -224998975 - AluSx SINE Alu -9 303 1 860 209 0 28 chr2 25688885 25689062 -224998792 - FAM SINE Alu -3 172 1 4319 136 50 79 chr2 25689073 25689238 -224998616 - L1MB7 LINE L1 0 6184 6016 2030 121 3 7 chr2 25689238 25689544 -224998310 - AluSx SINE Alu -7 305 1 4319 136 50 79 chr2 25689544 25690148 -224997706 - L1MB7 LINE L1 -168 6016 5442 1932 141 0 16 chr2 25690148 25690452 -224997402 - AluJb SINE Alu -13 299 1 4319 136 50 79 chr2 25690452 25690568 -224997286 - L1MB7 LINE L1 -742 5442 5324 1873 132 3 36 chr2 25690568 25690872 -224996982 - AluSx SINE Alu -18 294 1 327 259 12 0 chr2 25690872 25690957 -224996897 - L1MB7 LINE L1 -1321 4825 4740 2196 92 0 0 chr2 25690957 25691290 -224996564 - AluSx SINE Alu 0 333 1 394 262 59 0 chr2 25691298 25691436 -224996418 + L1MC4 LINE L1 1969 6988 -1334 697 226 0 0 chr2 25691466 25691599 -224996255 + FLAM_C SINE Alu 1 133 0 7195 102 181 86 chr2 25691619 25693168 -224994686 - pTR5 LTR ERV1 0 2438 743 782 176 23 0 chr2 25693168 25693299 -224994555 + AluJb SINE Alu 147 280 -32 189 0 0 0 chr2 25693301 25693322 -224994532 + (TAA)n Simple_repeat Simple_repeat 2 22 0 27 73 0 0 chr2 25693340 25693395 -224994459 + AT_rich Low_complexity Low_complexity 1 55 0 2051 107 14 0 chr2 25693474 25693764 -224994090 + AluSq SINE Alu 1 294 -19 1683 85 71 57 chr2 25693770 25693880 -224993974 + AluSx SINE Alu 13 120 -192 2139 88 0 3 chr2 25693880 25694187 -224993667 + AluSx SINE Alu 1 306 0 1683 85 71 57 chr2 25694187 25694356 -224993498 + AluSx SINE Alu 120 297 -15 277 99 0 28 chr2 25694523 25694770 -224993084 + AluJb SINE Alu 1 303 0 216 0 0 0 chr2 25695782 25695806 -224992048 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 427 178 36 234 chr2 25695883 25696105 -224991749 + L2 LINE L2 2540 2804 -510 1911 129 10 3 chr2 25696105 25696414 -224991440 + AluSx SINE Alu 1 311 -1 1821 149 0 7 chr2 25696419 25696720 -224991134 + AluJo SINE Alu 13 311 -1 427 178 36 234 chr2 25696720 25696795 -224991059 + L2 LINE L2 2695 2783 -531 7709 21 8 291 chr2 25696900 25698762 -224989092 + SVA Other Other 62 1407 0 202 244 24 0 chr2 25698762 25698803 -224989051 + L2 LINE L2 2773 2814 -500 1147 130 5 65 chr2 25698806 25699021 -224988833 - AluJo SINE Alu -4 308 107 615 107 0 0 chr2 25699031 25699115 -224988739 + AluSp/q SINE Alu 215 298 -15 * 665 172 9 9 chr2 25699110 25699226 -224988628 - AluJo SINE Alu -195 117 2 1161 128 12 0 chr2 25699279 25699451 -224988403 + AluSx SINE Alu 1 174 -138 985 129 80 54 chr2 25699706 25699789 -224988065 - AluSx SINE Alu -82 230 151 1859 103 21 4 chr2 25699789 25700070 -224987784 - AluSx SINE Alu -22 290 5 985 129 80 54 chr2 25700070 25700210 -224987644 - AluSx SINE Alu -161 151 1 2070 108 0 0 chr2 25700230 25700507 -224987347 - AluSx SINE Alu -35 277 1 503 256 64 29 chr2 25700520 25700692 -224987162 - MLT1H LTR MaLR -249 300 123 449 299 6 92 chr2 25700873 25700924 -224986930 + LTR16C LTR ERVL 80 134 -357 1850 122 38 0 chr2 25700924 25701211 -224986643 - AluSp SINE Alu -15 298 1 449 299 6 92 chr2 25701211 25701333 -224986521 + LTR16C LTR ERVL 134 238 -253 1951 124 28 0 chr2 25701335 25701625 -224986229 - AluSg SINE Alu -12 298 1 576 154 48 2 chr2 25701628 25701957 -224985897 + L1MC2 LINE L1 6137 6449 -1309 463 90 26 0 chr2 25701957 25702035 -224985819 + (TA)n Simple_repeat Simple_repeat 1 80 0 576 154 48 2 chr2 25702035 25702049 -224985805 + L1MC2 LINE L1 6449 6461 -1297 558 217 83 0 chr2 25702049 25702169 -224985685 - FLAM_A SINE Alu -3 130 1 576 154 48 2 chr2 25702169 25702188 -224985666 + L1MC2 LINE L1 6461 7758 0 774 248 78 24 chr2 25702201 25702493 -224985361 + MLT1G LTR MaLR 40 325 -270 327 146 0 0 chr2 25702827 25702875 -224984979 + Alu SINE Alu 1 48 -254 325 115 0 82 chr2 25702872 25702917 -224984937 + MLT1A1 LTR MaLR 255 295 -70 * 2242 100 7 0 chr2 25702917 25703226 -224984628 - AluSp SINE Alu -2 311 1 325 115 0 82 chr2 25703226 25703241 -224984613 + MLT1A1 LTR MaLR 295 310 -55 252 86 0 0 chr2 25703241 25703276 -224984578 + (CAT)n Simple_repeat Simple_repeat 2 36 0 849 150 94 22 chr2 25703278 25703458 -224984396 - AluJb SINE Alu -27 285 93 451 130 0 26 chr2 25703468 25703545 -224984309 + MLT1A1 LTR MaLR 291 365 0 2127 110 3 3 chr2 25703992 25704292 -224983562 + AluSg SINE Alu 1 300 -10 2027 119 37 0 chr2 25704331 25704626 -224983228 + AluSx SINE Alu 1 306 -6 227 189 19 0 chr2 25704839 25704892 -224982962 + (TA)n Simple_repeat Simple_repeat 1 54 0 1846 117 39 0 chr2 25704892 25705173 -224982681 - AluSx SINE Alu -20 292 1 804 158 21 68 chr2 25705174 25705408 -224982446 - L1MC5 LINE L1 -173 7788 7566 479 333 102 30 chr2 25705426 25705759 -224982095 + L2 LINE L2 2880 3236 -36 700 152 6 116 chr2 25706318 25706350 -224981504 + FAM SINE Alu 4 38 -283 2136 113 0 0 chr2 25706350 25706651 -224981203 - AluSx SINE Alu -11 301 1 700 152 6 116 chr2 25706651 25706782 -224981072 + FAM SINE Alu 38 149 -36 546 221 129 150 chr2 25706884 25707026 -224980828 - L2 LINE L2 -1 3312 3169 1780 195 41 31 chr2 25707026 25707416 -224980438 + MSTD LTR MaLR 1 394 -2 1896 113 13 17 chr2 25707416 25707540 -224980314 + AluSg SINE Alu 12 135 -175 2122 84 3 20 chr2 25707540 25707837 -224980017 + AluY SINE Alu 1 292 -19 1896 113 13 17 chr2 25707837 25708012 -224979842 + AluSg SINE Alu 135 310 0 546 221 129 150 chr2 25708012 25708032 -224979822 - L2 LINE L2 -143 3170 3151 944 230 5 0 chr2 25708032 25708219 -224979635 - MER5A DNA MER1_type 0 189 2 546 221 129 150 chr2 25708219 25708434 -224979420 - L2 LINE L2 -162 3151 2941 2233 119 0 0 chr2 25708434 25708745 -224979109 + AluSx SINE Alu 1 311 -1 1967 115 0 10 chr2 25708752 25709040 -224978814 + AluSg SINE Alu 1 285 -25 1411 223 101 47 chr2 25709145 25709623 -224978231 + L1MC4a LINE L1 7178 8008 -34 2163 79 7 0 chr2 25709623 25709926 -224977928 - AluSg SINE Alu 0 305 1 1411 223 101 47 chr2 25709926 25709961 -224977893 + L1MC4a LINE L1 8008 8040 -2 2035 138 0 0 chr2 25709966 25710277 -224977577 + AluSx SINE Alu 1 311 -1 279 293 30 10 chr2 25710331 25710430 -224977424 + MIR3 SINE MIR 54 154 -54 1734 149 18 0 chr2 25710456 25710731 -224977123 + AluJo SINE Alu 7 286 -26 279 0 0 0 chr2 25710740 25710771 -224977083 + (CAT)n Simple_repeat Simple_repeat 2 32 0 1462 114 71 36 chr2 25711061 25711341 -224976513 + AluSq SINE Alu 18 307 -6 1445 189 0 0 chr2 25711455 25711714 -224976140 + AluJb SINE Alu 47 305 -7 21 0 0 0 chr2 25712009 25712030 -224975824 + AT_rich Low_complexity Low_complexity 1 21 0 532 207 0 0 chr2 25712032 25712119 -224975735 - AluJ/FLAM SINE Alu -221 91 5 2111 94 17 0 chr2 25712131 25712429 -224975425 - AluSx SINE Alu -9 303 1 1888 153 3 7 chr2 25712702 25713010 -224974844 + AluJo SINE Alu 1 307 -5 969 176 0 0 chr2 25713085 25713250 -224974604 - FAM SINE Alu -10 175 11 240 35 0 0 chr2 25713261 25713290 -224974564 + (A)n Simple_repeat Simple_repeat 1 29 0 1030 156 6 17 chr2 25713577 25713756 -224974098 + L1MB2 LINE L1 5949 6125 -46 216 67 0 0 chr2 25713761 25713791 -224974063 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2090 92 3 3 chr2 25713794 25714076 -224973778 - AluSp SINE Alu -31 282 1 1612 104 4 13 chr2 25714148 25714379 -224973475 + AluSg SINE Alu 4 232 -78 2134 86 3 7 chr2 25714479 25714770 -224973084 - AluSq SINE Alu -23 290 1 726 206 0 8 chr2 25714770 25714896 -224972958 - FLAM_A SINE Alu -8 125 1 23 33 0 0 chr2 25714933 25714963 -224972891 + AT_rich Low_complexity Low_complexity 1 30 0 251 233 0 17 chr2 25715064 25715124 -224972730 + L1ME LINE L1 5505 5563 -558 245 319 60 0 chr2 25715208 25715324 -224972530 + L1ME LINE L1 3 125 -5945 * 2859 225 50 17 chr2 25715310 25715560 -224972294 + L1M4 LINE L1 2674 2914 -3232 756 177 15 0 chr2 25715560 25715690 -224972164 + FLAM_C SINE Alu 2 133 0 2224 87 37 0 chr2 25715698 25715996 -224971858 + AluSp SINE Alu 4 312 -1 2859 225 50 17 chr2 25715996 25716089 -224971765 + L1M4 LINE L1 2920 3008 -3138 2052 114 17 0 chr2 25716089 25716379 -224971475 + AluSg SINE Alu 1 295 -15 2071 131 7 7 chr2 25716386 25716691 -224971163 + AluJb SINE Alu 2 306 -6 2859 225 50 17 chr2 25716691 25717248 -224970606 + L1M4 LINE L1 3013 3622 -2524 382 190 63 5 chr2 25717253 25717376 -224970478 + Tigger5 DNA MER2_type 7 194 -2129 * 416 228 13 0 chr2 25717373 25717452 -224970402 + Tigger5 DNA MER2_type 2244 2323 0 379 153 12 24 chr2 25717484 25717569 -224970285 + L1M4 LINE L1 3685 3768 -2378 1916 128 3 32 chr2 25718249 25718562 -224969292 - AluSx SINE Alu -8 304 1 2224 101 0 7 chr2 25718704 25719001 -224968853 + AluSc SINE Alu 1 295 -14 2331 100 0 3 chr2 25719067 25719378 -224968476 + AluY SINE Alu 1 310 -1 2083 131 0 0 chr2 25719380 25719696 -224968158 + AluSx SINE Alu 1 316 0 2171 97 35 3 chr2 25720490 25720779 -224967075 - AluSq SINE Alu -15 298 1 949 162 87 140 chr2 25721091 25721224 -224966630 + MER44D DNA MER2_type 1 140 -2351 2067 121 0 48 chr2 25721224 25721389 -224966465 - AluSx SINE Alu -14 298 153 2334 112 0 3 chr2 25721389 25721702 -224966152 - AluSp SINE Alu -1 312 1 2067 121 0 48 chr2 25721702 25721849 -224966005 - AluSx SINE Alu -159 153 1 949 162 87 140 chr2 25721849 25722039 -224965815 + MER44D DNA MER2_type 140 339 -2152 2345 109 0 3 chr2 25722039 25722352 -224965502 + AluSp SINE Alu 2 313 0 949 162 87 140 chr2 25722352 25722385 -224965469 + MER44D DNA MER2_type 339 609 0 2023 116 35 3 chr2 25722512 25722796 -224965058 - AluSx SINE Alu -19 293 1 2229 113 7 0 chr2 25722861 25723162 -224964692 - AluSc SINE Alu -6 303 1 1000 95 7 15 chr2 25723164 25723301 -224964553 - AluSq/x SINE Alu -176 136 1 442 241 6 100 chr2 25723329 25723412 -224964442 + L1MB7 LINE L1 4672 4734 -1412 2308 92 0 0 chr2 25723412 25723744 -224964110 + AluSx SINE Alu 2 333 0 442 241 6 100 chr2 25723744 25723829 -224964025 + L1MB7 LINE L1 4734 4825 -1321 1997 132 3 36 chr2 25723829 25724133 -224963721 + AluSx SINE Alu 1 294 -18 4358 136 50 79 chr2 25724133 25724249 -224963605 + L1MB7 LINE L1 5324 5442 -742 2055 141 0 16 chr2 25724249 25724553 -224963301 + AluJb SINE Alu 1 299 -13 4358 136 50 79 chr2 25724553 25725157 -224962697 + L1MB7 LINE L1 5442 6016 -168 2151 121 3 7 chr2 25725157 25725463 -224962391 + AluSx SINE Alu 1 305 -7 4358 136 50 79 chr2 25725463 25725628 -224962226 + L1MB7 LINE L1 6016 6184 0 851 209 0 28 chr2 25725639 25725816 -224962038 + FAM SINE Alu 1 172 -3 2288 119 0 0 chr2 25725822 25726125 -224961729 + AluSx SINE Alu 1 303 -9 467 210 76 112 chr2 25726129 25726232 -224961622 + L1ME4a LINE L1 5603 5708 -413 1773 176 17 0 chr2 25726232 25726522 -224961332 - AluJo SINE Alu -17 295 1 467 210 76 112 chr2 25726522 25726642 -224961212 + L1ME4a LINE L1 5708 5818 -303 2074 95 0 41 chr2 25726656 25726979 -224960875 + AluSc SINE Alu 1 311 0 903 157 0 0 chr2 25727067 25727201 -224960653 - AluJo SINE Alu -178 134 1 504 211 66 26 chr2 25727218 25727370 -224960484 + L1ME4a LINE L1 5947 6104 -17 502 254 176 8 chr2 25727425 25727669 -224960185 - L1ME LINE L1 -436 5734 5450 362 250 18 9 chr2 25727764 25727876 -224959978 + MIR SINE MIR 21 133 -129 214 228 0 70 chr2 25728520 25728577 -224959277 - MIR SINE MIR -78 130 78 2151 111 7 17 chr2 25728629 25728926 -224958928 + AluSx SINE Alu 1 294 -18 1931 147 17 0 chr2 25728941 25729233 -224958621 + AluSx SINE Alu 1 297 -15 241 193 0 35 chr2 25729237 25729294 -224958560 - LTR54 LTR ERV1 -54 456 402 200 227 0 15 chr2 25729826 25729882 -224957972 + CT-rich Low_complexity Low_complexity 4 60 -8 1671 122 106 0 chr2 25729882 25730128 -224957726 - AluSx SINE Alu -40 272 1 2119 128 10 3 chr2 25730532 25730837 -224957017 + AluSx SINE Alu 3 309 -3 418 275 67 7 chr2 25730998 25731147 -224956707 - MIR SINE MIR -14 248 91 2266 93 3 13 chr2 25731147 25731448 -224956406 + AluSq SINE Alu 1 298 -15 2041 260 31 40 chr2 25731585 25732232 -224955622 - MER21B LTR ERV1 -125 738 98 519 179 24 0 chr2 25732438 25732522 -224955332 + FRAM/FAM SINE Alu 1 79 -97 204 179 0 0 chr2 25734347 25734386 -224953468 + (CA)n Simple_repeat Simple_repeat 1 39 0 2397 94 0 0 chr2 25735123 25735422 -224952432 - AluSx SINE Alu -13 299 1 677 377 503 0 chr2 25735734 25735867 -224951987 + MER44D DNA MER2_type 1 22 -2465 2067 121 0 48 chr2 25735867 25736032 -224951822 - AluSx SINE Alu -14 298 153 2334 112 0 3 chr2 25736032 25736345 -224951509 - AluSp SINE Alu -1 312 1 2067 121 0 48 chr2 25736345 25736492 -224951362 - AluSx SINE Alu -159 153 1 677 377 503 0 chr2 25736492 25736528 -224951326 + MER44D DNA MER2_type 22 27 -2460 360 89 0 0 chr2 25736528 25736584 -224951270 + L1MA1 LINE L1 6247 6302 0 677 377 503 0 chr2 25736584 25736681 -224951173 + MER44D DNA MER2_type 27 583 -22 2062 97 4 4 chr2 25736682 25736949 -224950905 + AluSp SINE Alu 2 268 -45 335 274 0 0 chr2 25736976 25737071 -224950783 + MIR SINE MIR 167 261 -1 2132 138 0 0 chr2 25737093 25737389 -224950465 - AluSx SINE Alu -16 296 1 761 194 8 0 chr2 25737539 25737668 -224950186 - FLAM_A SINE Alu -3 130 1 2260 118 0 0 chr2 25737967 25738264 -224949590 + AluSg SINE Alu 1 297 -13 195 256 0 0 chr2 25738282 25738325 -224949529 + L2 LINE L2 3172 3214 -58 1170 175 18 22 chr2 25738373 25738596 -224949258 + AluSg/x SINE Alu 83 304 -6 1593 185 0 18 chr2 25738596 25738882 -224948972 - AluJo SINE Alu -31 281 1 222 316 26 0 chr2 25739255 25739331 -224948523 + MIR SINE MIR 47 124 -138 1457 169 0 4 chr2 25739383 25739614 -224948240 - AluSx SINE Alu -82 230 1 509 298 82 76 chr2 25739614 25739725 -224948129 - L2 LINE L2 -12 3301 3192 883 134 0 8 chr2 25739725 25739859 -224947995 - FLAM_C SINE Alu 0 133 1 509 298 82 76 chr2 25739859 25740221 -224947633 - L2 LINE L2 -121 3192 2825 535 275 17 11 chr2 25740226 25740404 -224947450 - L2 LINE L2 -1941 1373 1195 2009 133 9 46 chr2 25740632 25740804 -224947050 - AluSx SINE Alu -1 311 134 414 0 0 0 chr2 25740804 25740850 -224947004 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2185 80 0 60 chr2 25740850 25741150 -224946704 - AluSg SINE Alu -28 282 1 2299 108 0 3 chr2 25741153 25741459 -224946395 - AluSg SINE Alu -5 305 1 2444 39 11 0 chr2 25741465 25741776 -224946078 - AluY SINE Alu 0 314 1 2009 133 9 46 chr2 25741776 25741913 -224945941 - AluSx SINE Alu -184 128 1 1695 169 3 59 chr2 25742010 25742191 -224945663 - AluJo SINE Alu -10 302 145 2195 105 0 0 chr2 25742191 25742477 -224945377 - AluSg SINE Alu -24 286 1 1695 169 3 59 chr2 25742477 25742615 -224945239 - AluJo SINE Alu -167 145 1 2109 130 0 3 chr2 25743312 25743604 -224944250 + AluSx SINE Alu 3 293 -19 650 324 32 0 chr2 25743792 25744011 -224943843 + LTR16C LTR ERVL 1 226 -265 939 225 94 72 chr2 25744028 25744256 -224943598 - MLT1H LTR MaLR -4 545 303 2258 107 3 0 chr2 25744256 25744546 -224943308 - AluSx SINE Alu -21 291 1 939 225 94 72 chr2 25744546 25744731 -224943123 - MLT1H LTR MaLR -246 303 123 446 299 6 92 chr2 25744912 25744963 -224942891 + LTR16C LTR ERVL 80 134 -357 2034 114 35 3 chr2 25744963 25745252 -224942602 - AluSp SINE Alu -15 298 1 446 299 6 92 chr2 25745252 25745374 -224942480 + LTR16C LTR ERVL 134 238 -253 2075 124 28 0 chr2 25745376 25745666 -224942188 - AluSg SINE Alu -12 298 1 1948 151 39 0 chr2 25745669 25746000 -224941854 + L1MC3 LINE L1 7418 7761 -24 308 158 158 0 chr2 25746000 25746076 -224941778 - L1MC4 LINE L1 -1340 6702 6615 554 217 83 0 chr2 25746090 25746210 -224941644 - FLAM_A SINE Alu -3 130 1 765 248 78 24 chr2 25746242 25746534 -224941320 + MLT1G LTR MaLR 40 325 -270 322 146 0 0 chr2 25746868 25746916 -224940938 + Alu SINE Alu 1 48 -255 * 360 89 36 0 chr2 25746914 25746970 -224940884 + MSTD LTR MaLR 284 341 -55 499 310 88 46 chr2 25746997 25747706 -224940148 + L1MEd LINE L1 636 1283 -4848 2453 67 3 0 chr2 25747706 25748006 -224939848 + AluY SINE Alu 1 301 -10 499 310 88 46 chr2 25748006 25748191 -224939663 + L1MEd LINE L1 1283 1459 -4672 2239 120 3 0 chr2 25748697 25749006 -224938848 + AluSx SINE Alu 1 310 -2 458 274 126 36 chr2 25749065 25749485 -224938369 + L1MEd LINE L1 2114 2571 -3558 2324 84 0 20 chr2 25749517 25749816 -224938038 + AluSg SINE Alu 1 293 -17 885 195 81 5 chr2 25749981 25750202 -224937652 - MIR SINE MIR -21 241 4 231 181 23 90 chr2 25750246 25750379 -224937475 + L1MEd LINE L1 2805 2928 -3201 778 105 53 0 chr2 25750642 25750756 -224937098 + MER30 DNA MER1_type 1 120 -110 216 0 0 0 chr2 25750861 25750885 -224936969 + (A)n Simple_repeat Simple_repeat 1 24 0 2292 86 10 3 chr2 25751201 25751504 -224936350 - AluSc SINE Alu -3 306 2 24 32 0 0 chr2 25751790 25751821 -224936033 + AT_rich Low_complexity Low_complexity 1 31 0 1189 102 17 34 chr2 25751826 25751972 -224935882 - AluSg/x SINE Alu -30 280 136 2519 67 3 0 chr2 25751972 25752271 -224935583 - AluSp SINE Alu -12 301 2 1189 102 17 34 chr2 25752271 25752301 -224935553 - AluSg/x SINE Alu -174 136 107 618 189 79 0 chr2 25752399 25752526 -224935328 + FLAM_C SINE Alu 2 138 -5 441 179 36 12 chr2 25753089 25753173 -224934681 - MLT1E1 LTR MaLR -50 604 519 1714 182 3 16 chr2 25753818 25753954 -224933900 + AluJb SINE Alu 1 137 -175 2363 101 0 0 chr2 25753954 25754252 -224933602 + AluSq SINE Alu 1 298 -15 1714 182 3 16 chr2 25754252 25754423 -224933431 + AluJb SINE Alu 137 304 -8 2099 115 20 0 chr2 25754611 25754907 -224932947 + AluSx SINE Alu 1 302 -10 569 198 18 0 chr2 25755011 25755122 -224932732 + AluJo SINE Alu 120 232 -80 1120 156 0 98 chr2 25755246 25755315 -224932539 + AluJb SINE Alu 86 160 -152 2092 86 43 4 chr2 25755315 25755594 -224932260 + AluSc SINE Alu 1 290 -19 1120 156 0 98 chr2 25755594 25755768 -224932086 + AluJb SINE Alu 160 305 -7 261 77 51 0 chr2 25755959 25755998 -224931856 - HAL1 LINE L1 -1940 567 527 1378 81 0 6 chr2 25756660 25756834 -224931020 - AluSp SINE Alu -10 303 131 300 270 109 42 chr2 25757013 25757184 -224930670 + L1M4 LINE L1 2855 3013 -3133 1820 147 46 0 chr2 25757184 25757469 -224930385 + AluJb SINE Alu 1 298 -14 300 270 109 42 chr2 25757469 25757793 -224930061 + L1M4 LINE L1 3013 3383 -2763 1600 52 4 48 chr2 25758007 25758237 -224929617 - L1PB1 LINE L1 0 6151 5932 922 154 87 0 chr2 25758338 25758487 -224929367 + AluSc SINE Alu 124 285 -24 1438 196 0 61 chr2 25759132 25759283 -224928571 + AluJo SINE Alu 1 125 -187 1761 177 0 0 chr2 25759283 25759571 -224928283 + AluJb SINE Alu 8 295 -17 1438 196 0 61 chr2 25759571 25759730 -224928124 + AluJo SINE Alu 125 292 -20 1687 156 23 23 chr2 25759867 25760168 -224927686 + AluJb SINE Alu 1 301 -11 814 218 14 0 chr2 25760391 25760538 -224927316 + FAM SINE Alu 1 149 -36 29 70 0 0 chr2 25760543 25760600 -224927254 + AT_rich Low_complexity Low_complexity 1 57 0 585 151 0 57 chr2 25761475 25761581 -224926273 + FLAM_C SINE Alu 24 123 -20 21 36 0 0 chr2 25761581 25761609 -224926245 + AT_rich Low_complexity Low_complexity 1 28 0 369 219 62 27 chr2 25762021 25762167 -224925687 + L1ME4a LINE L1 5967 6117 -4 361 225 12 0 chr2 25764219 25764299 -224923555 + L2 LINE L2 3186 3266 -6 2314 112 0 6 chr2 25764919 25765232 -224922622 + AluSx SINE Alu 2 312 0 569 171 147 47 chr2 25766503 25766611 -224921243 - LTR16A1 LTR ERVL -19 438 305 1993 147 3 3 chr2 25766611 25766918 -224920936 + AluSx SINE Alu 1 307 -5 569 171 147 47 chr2 25766918 25766979 -224920875 - LTR16A1 LTR ERVL -151 306 252 299 191 181 29 chr2 25767227 25767332 -224920522 - L1ME LINE L1 -295 5826 5706 311 320 10 19 chr2 25767356 25767459 -224920395 + L1MC4a LINE L1 5844 5945 -1863 340 315 0 0 chr2 25767550 25767642 -224920212 + LTR67 LTR ERVL 117 208 -349 238 346 0 19 chr2 25767680 25767784 -224920070 + LTR67 LTR ERVL 371 472 -85 1623 85 0 22 chr2 25767821 25768045 -224919809 - AluSq SINE Alu -94 219 1 23 0 0 0 chr2 25768058 25768081 -224919773 + AT_rich Low_complexity Low_complexity 1 23 0 189 107 0 0 chr2 25768171 25768199 -224919655 + (TG)n Simple_repeat Simple_repeat 2 29 0 1274 289 13 4 chr2 25768217 25768592 -224919262 + LTR16A LTR ERVL 16 440 -10 361 204 108 32 chr2 25768595 25768688 -224919166 + HERV16 LTR ERVL 1985 2084 -2912 413 311 104 5 chr2 25768710 25768903 -224918951 + HERV16 LTR ERVL 2245 2456 -2540 853 276 97 47 chr2 25768916 25769297 -224918557 + HERV16 LTR ERVL 3314 3713 -2051 2268 101 104 94 chr2 25769299 25769473 -224918381 + MSTA LTR MaLR 1 172 -256 2249 84 3 10 chr2 25769473 25769783 -224918071 + AluSx SINE Alu 1 308 -4 1297 62 0 0 chr2 25769791 25769951 -224917903 + L1PA7 LINE L1 5990 6149 -5 2268 101 104 94 chr2 25769951 25770191 -224917663 + MSTA LTR MaLR 178 428 0 1753 305 18 55 chr2 25770202 25770555 -224917299 + HERV16 LTR ERVL 3682 4046 -1718 1561 136 0 71 chr2 25770555 25770652 -224917202 + AluJo SINE Alu 37 139 -173 2269 109 0 0 chr2 25770652 25770955 -224916899 - AluSg SINE Alu -7 303 1 1561 136 0 71 chr2 25770955 25771137 -224916717 + AluJo SINE Alu 139 296 -16 1753 305 18 55 chr2 25771137 25771635 -224916219 + HERV16 LTR ERVL 4046 4533 -1231 2211 84 3 3 chr2 25771635 25771932 -224915922 - AluSq SINE Alu -16 297 1 270 0 0 0 chr2 25771944 25771974 -224915880 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 534 344 39 12 chr2 25772572 25772881 -224914973 + HERV16 LTR ERVL 4683 5074 -690 1735 183 3 0 chr2 25772881 25773192 -224914662 + AluSx SINE Alu 1 312 0 1766 98 37 0 chr2 25773350 25773594 -224914260 + AluSq SINE Alu 1 253 -60 1201 248 150 3 chr2 25773910 25774237 -224913617 + LTR16A LTR ERVL 33 407 -43 420 97 0 0 chr2 25774355 25774417 -224913437 - Alu SINE Alu -11 300 239 242 208 94 0 chr2 25774548 25774601 -224913253 - MIR SINE MIR -157 105 48 2154 86 26 10 chr2 25774605 25774909 -224912945 - AluSx SINE Alu -3 309 1 1732 143 39 26 chr2 25774982 25775289 -224912565 + AluJb SINE Alu 1 311 -1 657 146 89 24 chr2 25775415 25775538 -224912316 + FLAM_C SINE Alu 13 143 0 1540 165 59 0 chr2 25775567 25775839 -224912015 + AluJo SINE Alu 1 288 -24 954 196 0 0 chr2 25775841 25776020 -224911834 + AluJb SINE Alu 131 309 -3 2011 95 0 0 chr2 25776032 25776296 -224911558 + AluSx SINE Alu 1 264 -48 2299 66 7 0 chr2 25776372 25776660 -224911194 - AluSp SINE Alu -18 295 6 1953 95 3 69 chr2 25777517 25777834 -224910020 + AluSp SINE Alu 1 296 -17 1015 172 0 0 chr2 25777995 25778169 -224909685 - AluSg/x SINE Alu -4 308 135 1778 152 7 20 chr2 25778303 25778606 -224909248 - AluJo SINE Alu -13 299 1 2330 84 0 0 chr2 25778804 25779101 -224908753 + AluSq SINE Alu 1 297 -16 270 224 43 86 chr2 25779242 25779358 -224908496 + HUERS-P1 LTR ERV1 1689 1799 -4464 1063 133 11 11 chr2 25779367 25779547 -224908307 + AluSg/x SINE Alu 128 307 -3 630 141 0 10 chr2 25779569 25779668 -224908186 + AluJo/FLAM SINE Alu 9 106 -206 307 211 14 0 chr2 25779668 25779739 -224908115 + AluJ/FRAM SINE Alu 230 301 -1 1924 117 0 11 chr2 25779789 25780112 -224907742 + AluSx SINE Alu 7 326 0 2077 115 3 16 chr2 25780228 25780364 -224907490 + AluSx SINE Alu 1 137 -175 2157 88 7 0 chr2 25780364 25780659 -224907195 + AluSg SINE Alu 1 297 -13 2077 115 3 16 chr2 25780659 25780826 -224907028 + AluSx SINE Alu 137 300 -12 2028 85 4 11 chr2 25780826 25781098 -224906756 + AluSq SINE Alu 1 270 -43 2280 72 7 0 chr2 25781255 25781547 -224906307 + AluY SINE Alu 1 294 -17 725 179 73 0 chr2 25781854 25781977 -224905877 - FRAM SINE Alu -25 151 20 892 168 6 22 chr2 25782023 25782202 -224905652 + AluJb SINE Alu 129 304 -8 1420 153 78 3 chr2 25782228 25782510 -224905344 + AluJo SINE Alu 1 303 -9 746 173 11 17 chr2 25782516 25782695 -224905159 + GA-rich Low_complexity Low_complexity 3 180 0 215 74 0 0 chr2 25782696 25782723 -224905131 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 960 170 299 12 chr2 25782898 25783239 -224904615 + L1MC4 LINE L1 7604 8042 0 1191 148 178 59 chr2 25783247 25783517 -224904337 + AluJb SINE Alu 1 302 0 1933 108 0 4 chr2 25783646 25783914 -224903940 + AluSx SINE Alu 6 272 -40 1508 106 4 38 chr2 25783916 25784151 -224903703 - AluSx SINE Alu -84 228 2 2232 102 0 13 chr2 25784160 25784474 -224903380 - AluSq SINE Alu -3 310 1 195 210 321 12 chr2 25784554 25784635 -224903219 + MER5B DNA MER1_type 1 106 -72 261 180 0 0 chr2 25784847 25784897 -224902957 + A-rich Low_complexity Low_complexity 1 50 0 327 258 175 0 chr2 25785286 25785383 -224902471 + L2 LINE L2 3143 3256 -16 2132 77 3 33 chr2 25785962 25786261 -224901593 + AluY SINE Alu 1 290 -21 30 0 0 0 chr2 25786265 25786295 -224901559 + AT_rich Low_complexity Low_complexity 1 30 0 1341 98 14 115 chr2 25786387 25786468 -224901386 + L1MA1 LINE L1 6035 6123 -179 231 114 0 0 chr2 25786468 25786503 -224901351 + (TG)n Simple_repeat Simple_repeat 2 36 0 1341 98 14 115 chr2 25786503 25786516 -224901338 + L1MA1 LINE L1 6123 6136 -166 2171 89 7 0 chr2 25786516 25786798 -224901056 - AluSq SINE Alu -17 296 13 1341 98 14 115 chr2 25786798 25786939 -224900915 + L1MA1 LINE L1 6136 6240 -62 1943 139 0 0 chr2 25786939 25787234 -224900620 + AluSx SINE Alu 1 295 -17 1341 98 14 115 chr2 25787234 25787283 -224900571 + L1MA1 LINE L1 6240 6292 -10 42 15 0 44 chr2 25787283 25787320 -224900534 + AT_rich Low_complexity Low_complexity 1 38 -27 2315 72 0 0 chr2 25787320 25787612 -224900242 - AluY SINE Alu -19 292 1 2326 75 13 0 chr2 25787612 25787919 -224899935 - AluSx SINE Alu -1 311 1 42 15 0 44 chr2 25787919 25787948 -224899906 + AT_rich Low_complexity Low_complexity 36 65 0 570 257 90 0 chr2 25788583 25788727 -224899127 - MIR3 SINE MIR -7 201 45 386 267 188 33 chr2 25791068 25791266 -224896588 - MIR SINE MIR -10 252 27 263 167 0 21 chr2 25791359 25791407 -224896447 + MER57A LTR ERV1 291 337 -66 294 267 35 0 chr2 25791942 25792028 -224895826 + MER96 DNA MER1_type? 87 175 0 2031 126 0 0 chr2 25792251 25792553 -224895301 + AluSx SINE Alu 1 302 -10 907 81 8 0 chr2 25792747 25792870 -224894984 + AluSp SINE Alu 3 126 -187 299 255 133 58 chr2 25793217 25793253 -224894601 + MIR3 SINE MIR 36 68 -140 2027 124 0 0 chr2 25793253 25793551 -224894303 + AluSq SINE Alu 1 298 -15 299 255 133 58 chr2 25793551 25793675 -224894179 + MIR3 SINE MIR 68 208 0 1282 141 51 63 chr2 25793913 25794223 -224893631 - L1MB2 LINE L1 -23 6148 5869 * 2334 182 65 0 chr2 25794211 25794655 -224893199 - L1MB3 LINE L1 -41 6142 5670 1221 179 4 17 chr2 25794655 25794890 -224892964 - AluJb SINE Alu -9 303 72 188 135 27 0 chr2 25794992 25795029 -224892825 + A-rich Low_complexity Low_complexity 5 42 0 2395 86 0 3 chr2 25795509 25795862 -224891992 + AluSx SINE Alu 1 352 0 1816 236 107 14 chr2 25795862 25796412 -224891442 + L1ME2 LINE L1 5040 5692 -478 2063 177 19 11 chr2 25796412 25796774 -224891080 + MLT1A1 LTR MaLR 1 365 0 1816 236 107 14 chr2 25796774 25797004 -224890850 + L1ME2 LINE L1 5692 5899 -271 1006 79 0 0 chr2 25797020 25797146 -224890708 + AluSq/x SINE Alu 1 126 -187 192 40 0 0 chr2 25797146 25797171 -224890683 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 230 190 65 87 chr2 25797182 25797285 -224890569 + L1ME2 LINE L1 5872 5972 -190 451 276 161 52 chr2 25797850 25798067 -224889787 - L2 LINE L2 -10 3262 3005 2174 104 0 0 chr2 25798067 25798365 -224889489 + AluSg SINE Alu 1 298 -12 451 276 161 52 chr2 25798365 25798433 -224889421 - L2 LINE L2 -267 3005 2946 1803 116 49 0 chr2 25798480 25798764 -224889090 - AluSx SINE Alu -14 298 1 654 278 30 47 chr2 25798934 25799045 -224888809 + MIR SINE MIR 29 140 -122 2410 71 0 0 chr2 25799045 25799342 -224888512 + AluSp SINE Alu 1 297 -16 654 278 30 47 chr2 25799342 25799464 -224888390 + MIR SINE MIR 140 258 -4 2163 100 3 0 chr2 25799577 25799868 -224887986 - AluSq SINE Alu -15 298 7 2134 114 3 0 chr2 25799876 25800184 -224887670 - AluSq SINE Alu -4 309 1 1925 123 10 3 chr2 25800315 25800607 -224887247 + AluSx SINE Alu 1 294 -18 879 173 24 12 chr2 25800822 25800990 -224886864 - AluJo SINE Alu -98 214 45 216 227 0 0 chr2 25800990 25801034 -224886820 + L2 LINE L2 3262 3305 -8 590 316 106 56 chr2 25801103 25801498 -224886356 - L3 LINE CR1 -104 1473 1059 1484 178 43 33 chr2 25801674 25801780 -224886074 + AluJo SINE Alu 1 104 -208 2240 84 0 3 chr2 25801780 25802077 -224885777 + AluY SINE Alu 1 296 -15 1484 178 43 33 chr2 25802077 25802273 -224885581 + AluJo SINE Alu 104 306 -6 747 285 64 47 chr2 25802298 25802670 -224885184 + L1ME LINE L1 5380 5678 -484 2039 114 3 16 chr2 25802792 25803107 -224884747 + AluSx SINE Alu 1 311 -1 289 0 0 0 chr2 25803134 25803166 -224884688 - L1MA1 LINE L1 -58 6244 6213 2306 89 0 0 chr2 25803301 25803603 -224884251 - AluSq SINE Alu -11 302 1 1886 134 14 0 chr2 25803815 25804107 -224883747 + AluSg SINE Alu 1 296 -14 1869 132 0 4 chr2 25804213 25804486 -224883368 - AluSx SINE Alu -40 272 1 25 40 0 20 chr2 25804496 25804515 -224883339 + AT_rich Low_complexity Low_complexity 1 19 -30 2048 107 3 10 chr2 25804515 25804814 -224883040 - AluSq SINE Alu -16 297 1 25 40 0 20 chr2 25804814 25804844 -224883010 + AT_rich Low_complexity Low_complexity 19 49 0 856 132 0 0 chr2 25804896 25805025 -224882829 + FLAM_C SINE Alu 1 129 -14 344 167 0 0 chr2 25805149 25805203 -224882651 - Charlie5 DNA MER1_type -2550 62 9 890 152 0 0 chr2 25805344 25805482 -224882372 - FRAM SINE Alu -39 137 1 1641 163 24 3 chr2 25805547 25805842 -224882012 + AluJo SINE Alu 1 301 -11 354 282 77 17 chr2 25806164 25806281 -224881573 + L2 LINE L2 3189 3312 -1 2178 103 0 10 chr2 25806424 25806735 -224881119 + AluSx SINE Alu 1 308 -4 2202 101 7 0 chr2 25806789 25807096 -224880758 + AluSq SINE Alu 1 309 -4 1888 133 3 36 chr2 25807519 25807821 -224880033 + AluJo SINE Alu 1 292 -20 721 143 0 0 chr2 25807840 25807945 -224879909 + U6 snRNA snRNA 1 105 -2 1640 211 28 11 chr2 25807950 25808310 -224879544 + L1M3 LINE L1 5315 5680 -500 268 146 21 21 chr2 25808310 25808358 -224879496 + Alu SINE Alu 1 48 -254 392 306 116 70 chr2 25808498 25808782 -224879072 + L2 LINE L2 2967 3263 -9 1828 105 0 0 chr2 25808851 25809099 -224878755 - AluSx SINE Alu -64 248 1 223 265 213 52 chr2 25809420 25809482 -224878372 + MER5B DNA MER1_type 1 52 -126 730 182 15 15 chr2 25809482 25809614 -224878240 + FLAM_C SINE Alu 2 133 0 223 265 213 52 chr2 25809614 25809687 -224878167 + MER5B DNA MER1_type 52 158 -20 184 258 136 15 chr2 25809723 25809789 -224878065 - MIR SINE MIR -105 157 84 261 349 110 0 chr2 25809840 25809949 -224877905 + L2 LINE L2 3118 3238 -34 1717 181 10 0 chr2 25810014 25810323 -224877531 + AluJb SINE Alu 1 312 0 1070 119 12 0 chr2 25811163 25811323 -224876531 + AluSg/x SINE Alu 137 298 -14 2258 85 10 0 chr2 25811729 25812036 -224875818 - AluSp SINE Alu -3 310 1 391 41 107 8 chr2 25812101 25812222 -224875632 + (TA)n Simple_repeat Simple_repeat 2 134 0 304 195 51 93 chr2 25812223 25812341 -224875513 - L1MCa LINE L1 -4362 2064 1952 2043 139 0 0 chr2 25812808 25813111 -224874743 + AluSx SINE Alu 1 303 -9 375 169 28 42 chr2 25813113 25813184 -224874670 - L1MCa LINE L1 -4362 2064 1995 525 55 0 0 chr2 25813184 25813257 -224874597 + (GA)n Simple_repeat Simple_repeat 2 74 0 1322 187 4 26 chr2 25813266 25813534 -224874320 - AluJb SINE Alu -50 262 1 300 159 125 45 chr2 25813534 25813622 -224874232 - L1MC5 LINE L1 -414 7547 7453 1934 152 0 0 chr2 25813668 25813965 -224873889 + AluJb SINE Alu 1 297 -15 770 332 50 4 chr2 25813988 25814268 -224873586 + L3 LINE CR1 834 1126 -451 2033 129 0 0 chr2 25814590 25814885 -224872969 + AluSx SINE Alu 1 295 -17 1642 132 110 7 chr2 25814964 25815386 -224872468 + LTR54 LTR ERV1 4 495 -3 2113 117 0 0 chr2 25815544 25815844 -224872010 - AluSc SINE Alu -9 300 1 1557 178 18 11 chr2 25815844 25816130 -224871724 - AluJo SINE Alu -23 289 2 618 274 48 12 chr2 25816160 25816328 -224871526 - MIR SINE MIR -50 212 39 321 307 10 30 chr2 25817339 25817440 -224870414 + MIR SINE MIR 4 102 -160 537 253 27 16 chr2 25817446 25817632 -224870222 - L1MC5 LINE L1 -35 7926 7739 2339 98 3 0 chr2 25817633 25817928 -224869926 - AluSx SINE Alu -12 300 5 2023 154 3 3 chr2 25817951 25818263 -224869591 - AluJb SINE Alu 0 312 1 308 255 123 0 chr2 25818267 25818373 -224869481 + MIR SINE MIR 104 222 -40 1094 103 18 36 chr2 25818408 25818424 -224869430 + AluSg/x SINE Alu 120 135 -181 1850 163 3 7 chr2 25818424 25818713 -224869141 + AluJo SINE Alu 3 290 -22 1094 103 18 36 chr2 25818713 25818896 -224868958 + AluSg/x SINE Alu 135 316 0 547 223 56 72 chr2 25819295 25819546 -224868308 - LTR67 LTR ERVL 0 557 311 1164 120 0 0 chr2 25819645 25819803 -224868051 + AluSg/x SINE Alu 153 310 0 1425 100 0 25 chr2 25819944 25819963 -224867891 - AluSg/x SINE Alu -1 311 293 1162 82 0 6 chr2 25819963 25820133 -224867721 - L1MA1 LINE L1 0 6302 6134 1425 100 0 25 chr2 25820133 25820313 -224867541 - AluSg/x SINE Alu -19 293 117 1083 152 0 0 chr2 25820413 25820564 -224867290 - AluJb SINE Alu -24 288 138 2383 92 3 3 chr2 25820844 25821150 -224866704 - AluSp SINE Alu -7 306 1 2399 68 0 0 chr2 25821479 25821800 -224866054 - AluY SINE Alu 0 321 1 320 59 20 0 chr2 25821804 25821855 -224865999 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 2423 82 0 3 chr2 25822447 25822740 -224865114 - AluSc SINE Alu -17 292 1 1728 179 0 10 chr2 25822742 25823038 -224864816 - AluJb SINE Alu -19 293 1 2199 126 7 0 chr2 25823047 25823348 -224864506 - AluSx SINE Alu -9 303 1 315 257 76 38 chr2 25823720 25823825 -224864029 + MIR3 SINE MIR 57 165 -43 2031 169 0 0 chr2 25823838 25824140 -224863714 + AluJb SINE Alu 5 306 -6 618 158 0 0 chr2 25824149 25824244 -224863610 + AluS SINE Alu 2 96 -216 2025 133 7 3 chr2 25824317 25824610 -224863244 + AluSx SINE Alu 1 294 -18 576 139 97 14 chr2 25824733 25824877 -224862977 - L1MA4 LINE L1 -3 6297 6142 2202 117 0 7 chr2 25824932 25825223 -224862631 - AluSc SINE Alu -20 289 1 712 214 83 0 chr2 25825235 25825403 -224862451 + AluJo SINE Alu 115 296 -16 663 174 16 0 chr2 25825417 25825538 -224862316 - FLAM_A SINE Alu -10 123 1 2269 100 17 0 chr2 25825786 25826075 -224861779 + AluSx SINE Alu 1 294 -18 2294 101 13 0 chr2 25826575 25826882 -224860972 + AluSq SINE Alu 3 313 0 327 104 0 0 chr2 25826925 25826973 -224860881 + (A)n Simple_repeat Simple_repeat 1 48 0 2061 104 11 14 chr2 25829061 25829348 -224858506 - AluSx SINE Alu -25 287 2 952 254 91 21 chr2 25829348 25829734 -224858120 - L1M4 LINE L1 -3371 2775 2363 1858 146 3 61 chr2 25829882 25830210 -224857644 - AluJb SINE Alu -3 309 1 298 320 64 19 chr2 25830675 25830831 -224857023 + MIR SINE MIR 65 227 -35 387 272 37 63 chr2 25831103 25831294 -224856560 - L1ME1 LINE L1 -46 6120 5935 234 0 0 0 chr2 25831306 25831332 -224856522 + (T)n Simple_repeat Simple_repeat 1 26 0 934 85 30 12 chr2 25831434 25831598 -224856256 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 2456 81 0 31 chr2 25831606 25832013 -224855841 - AluY SINE Alu 0 397 1 2240 130 0 0 chr2 25832016 25832324 -224855530 - AluSx SINE Alu -4 308 1 749 158 23 17 chr2 25832346 25832523 -224855331 + CT-rich Low_complexity Low_complexity 1 178 0 2086 120 40 0 chr2 25832537 25832836 -224855018 - AluSp SINE Alu -1 312 2 889 175 44 38 chr2 25832842 25833025 -224854829 - AluJo SINE Alu -6 306 123 2176 145 0 0 chr2 25833394 25833697 -224854157 + AluSx SINE Alu 1 303 -9 312 294 0 68 chr2 25834241 25834387 -224853467 - MIR SINE MIR -50 212 77 2149 107 21 3 chr2 25834411 25834701 -224853153 - AluSx SINE Alu -17 295 1 281 281 12 24 chr2 25834882 25834964 -224852890 - L2 LINE L2 -546 2768 2688 259 246 29 0 chr2 25834965 25835034 -224852820 + CT-rich Low_complexity Low_complexity 6 76 0 208 324 73 0 chr2 25835739 25835807 -224852047 + L2 LINE L2 3231 3303 -10 200 35 35 0 chr2 25835811 25835840 -224852014 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 27 29 0 0 chr2 25836871 25836905 -224850949 + AT_rich Low_complexity Low_complexity 1 34 0 2226 122 0 0 chr2 25836954 25837250 -224850604 + AluSq SINE Alu 1 296 -17 2382 89 0 0 chr2 25837251 25837544 -224850310 + AluSc SINE Alu 1 293 -16 321 26 0 0 chr2 25837563 25837601 -224850253 + (TAA)n Simple_repeat Simple_repeat 1 38 0 1453 164 116 40 chr2 25837606 25837881 -224849973 + AluJb SINE Alu 1 296 -16 1608 106 0 14 chr2 25837996 25838213 -224849641 + AluSg SINE Alu 1 214 -96 2295 132 0 0 chr2 25838249 25838559 -224849295 + AluSg SINE Alu 1 310 0 863 150 0 0 chr2 25838610 25838743 -224849111 + FLAM_C SINE Alu 1 133 0 214 362 21 11 chr2 25838900 25838994 -224848860 + MIR SINE MIR 19 113 -149 751 245 70 10 chr2 25838994 25839194 -224848660 - MLT1K LTR MaLR 0 588 377 2380 82 0 26 chr2 25839216 25839519 -224848335 - AluY SINE Alu -16 295 1 2444 99 0 6 chr2 25839522 25839835 -224848019 - AluSq SINE Alu -2 311 1 458 318 161 0 chr2 25839836 25840059 -224847795 - MLT1K LTR MaLR -320 268 10 2168 135 0 0 chr2 25840395 25840691 -224847163 + AluSx SINE Alu 1 296 -16 741 179 0 0 chr2 25840743 25840860 -224846994 + FLAM_C SINE Alu 2 118 -15 381 22 0 0 chr2 25840862 25840908 -224846946 + (TG)n Simple_repeat Simple_repeat 1 46 0 2108 111 4 7 chr2 25840908 25841188 -224846666 - AluSx SINE Alu -33 279 1 695 180 16 0 chr2 25841513 25841635 -224846219 + FLAM_A SINE Alu 1 124 -9 2102 133 0 3 chr2 25841655 25841989 -224845865 + AluSx SINE Alu 1 333 0 367 262 148 0 chr2 25842628 25842750 -224845104 + MER91C DNA MER1_type 1 140 0 2276 216 83 33 chr2 25843028 25843370 -224844484 + L1ME3A LINE L1 5456 5779 -391 2315 100 3 0 chr2 25843370 25843661 -224844193 + AluSq SINE Alu 5 296 -17 2314 97 7 0 chr2 25843662 25843971 -224843883 + AluY SINE Alu 1 311 0 2276 216 83 33 chr2 25843971 25843992 -224843862 + L1ME3A LINE L1 5779 5797 -373 2336 100 3 13 chr2 25843992 25844303 -224843551 + AluSp SINE Alu 1 308 -5 2276 216 83 33 chr2 25844303 25844609 -224843245 + L1ME3A LINE L1 5797 6162 -8 681 232 61 49 chr2 25844603 25844849 -224843005 + L1MEc LINE L1 8 256 -6140 * 427 257 29 68 chr2 25844862 25844887 -224842967 + L1MEc LINE L1 390 414 -5982 1472 164 118 8 chr2 25844887 25845149 -224842705 - AluSg1 SINE Alu -18 291 1 427 257 29 68 chr2 25845149 25845329 -224842525 + L1MEc LINE L1 414 587 -5809 424 241 70 82 chr2 25845585 25845743 -224842111 + L2 LINE L2 3158 3313 0 2276 101 0 31 chr2 25846447 25846764 -224841090 + AluSg SINE Alu 1 307 -3 1376 74 0 0 chr2 25847371 25847533 -224840321 + AluY SINE Alu 1 162 -149 656 290 65 0 chr2 25847831 25848076 -224839778 + AluSx SINE Alu 50 310 -2 1105 165 6 0 chr2 25848222 25848392 -224839462 - FRAM SINE Alu -13 163 1 733 164 138 13 chr2 25849231 25849383 -224838471 - AluJb SINE Alu -16 296 126 2249 114 7 0 chr2 25849867 25850156 -224837698 - AluSx SINE Alu -17 295 5 553 302 33 6 chr2 25850596 25850778 -224837076 - MIR SINE MIR -56 206 20 265 324 63 9 chr2 25851129 25851240 -224836614 + MIR SINE MIR 35 151 -111 1766 155 0 63 chr2 25851279 25851622 -224836232 + AluJb SINE Alu 1 324 0 268 300 33 8 chr2 25852328 25852448 -224835406 - MIR3 SINE MIR -5 203 81 2509 89 0 0 chr2 25852575 25852878 -224834976 - AluSx SINE Alu -9 303 1 198 189 0 0 chr2 25852905 25852942 -224834912 - MIR SINE MIR -87 121 85 701 30 10 30 chr2 25853148 25853249 -224834605 + L1PB1 LINE L1 6053 6151 0 360 250 94 31 chr2 25853262 25853390 -224834464 - HAL1b LINE L1 -2 1346 1238 2131 141 10 0 chr2 25853473 25853770 -224834084 - AluSx SINE Alu -12 300 1 474 286 85 77 chr2 25853935 25854140 -224833714 + MIR SINE MIR 2 211 -51 2342 113 3 0 chr2 25854140 25854450 -224833404 + AluSq SINE Alu 1 311 -2 474 286 85 77 chr2 25854450 25854503 -224833351 + MIR SINE MIR 211 262 0 2114 108 0 49 chr2 25854598 25854745 -224833109 + AluSc SINE Alu 1 154 -155 2566 70 0 0 chr2 25854745 25855046 -224832808 + AluY SINE Alu 1 301 -10 2114 108 0 49 chr2 25855046 25855222 -224832632 + AluSc SINE Alu 154 308 -1 1613 180 0 59 chr2 25855456 25855779 -224832075 - AluJo SINE Alu -6 306 3 292 285 32 8 chr2 25856583 25856706 -224831148 + CT-rich Low_complexity Low_complexity 2 127 0 280 336 100 0 chr2 25856869 25856979 -224830875 - L3 LINE CR1 -25 1552 1432 495 171 0 122 chr2 25856982 25857026 -224830828 - L1MA10 LINE L1 -13 6321 6273 2413 103 0 0 chr2 25857026 25857326 -224830528 + AluSx SINE Alu 1 300 -12 495 171 0 122 chr2 25857326 25857404 -224830450 - L1MA10 LINE L1 -61 6273 6214 409 266 77 14 chr2 25857751 25857811 -224830043 - MIR SINE MIR 0 262 207 2442 87 0 6 chr2 25857811 25858122 -224829732 - AluSc SINE Alu 0 309 1 913 135 0 0 chr2 25858122 25858255 -224829599 - AluJo/FLAM SINE Alu -169 133 1 409 266 77 14 chr2 25858255 25858336 -224829518 - MIR SINE MIR -54 208 111 2371 101 3 0 chr2 25858499 25858795 -224829059 + AluSp SINE Alu 1 297 -16 2044 140 0 3 chr2 25858913 25859205 -224828649 - AluJb SINE Alu -10 302 12 662 299 65 13 chr2 25859302 25859431 -224828423 + MIR SINE MIR 20 141 -121 2414 92 0 0 chr2 25859431 25859734 -224828120 + AluY SINE Alu 1 303 -8 662 299 65 13 chr2 25859734 25859835 -224828019 + MIR SINE MIR 141 262 0 2124 110 10 3 chr2 25860331 25860621 -224827233 + AluSq SINE Alu 1 292 -21 189 239 56 42 chr2 25861903 25861974 -224825880 - MIR SINE MIR -59 149 78 509 247 33 60 chr2 25862004 25862186 -224825668 + MIR SINE MIR 20 196 -66 472 293 42 31 chr2 25863286 25863477 -224824377 - MIR3 SINE MIR -12 196 4 311 268 71 27 chr2 25863593 25863705 -224824149 + MIR SINE MIR 30 146 -62 246 136 0 0 chr2 25864916 25864960 -224822894 + (CCA)n Simple_repeat Simple_repeat 2 45 0 206 269 0 0 chr2 25866276 25866328 -224821526 + (CCG)n Simple_repeat Simple_repeat 1 52 0 208 230 0 27 chr2 25866424 25866498 -224821356 + G-rich Low_complexity Low_complexity 3 74 0 349 256 41 123 chr2 25867364 25867583 -224820271 + MIR SINE MIR 11 211 -51 2217 112 0 0 chr2 25868425 25868719 -224819135 + AluSc SINE Alu 1 294 -15 245 288 0 14 chr2 25868721 25868794 -224819060 + MIR SINE MIR 82 153 -109 953 174 6 6 chr2 25868800 25868961 -224818893 + FRAM SINE Alu 1 157 -19 261 342 47 13 chr2 25869090 25869239 -224818615 + L2 LINE L2 2816 2969 -303 1597 166 10 71 chr2 25869262 25869438 -224818416 - AluJo SINE Alu -23 289 139 2200 87 33 3 chr2 25869438 25869737 -224818117 + AluSg SINE Alu 1 308 -2 1597 166 10 71 chr2 25869737 25869868 -224817986 - AluJo SINE Alu -173 139 1 544 159 11 0 chr2 25869941 25870029 -224817825 + AluJ/FLAM SINE Alu 2 90 -222 188 339 0 0 chr2 25870058 25870117 -224817737 + L2 LINE L2 1851 1909 -1405 784 286 106 83 chr2 25870121 25870590 -224817264 + L2 LINE L2 2172 2629 -643 2015 138 0 52 chr2 25870590 25870915 -224816939 + AluSq SINE Alu 1 308 -5 784 286 106 83 chr2 25870915 25870939 -224816915 + L2 LINE L2 2629 2651 -621 1683 176 13 20 chr2 25870939 25871240 -224816614 + AluJo SINE Alu 1 299 -13 784 286 106 83 chr2 25871240 25871254 -224816600 + L2 LINE L2 2651 2663 -609 2198 114 0 10 chr2 25871254 25871561 -224816293 + AluSx SINE Alu 1 304 -8 784 286 106 83 chr2 25871561 25871602 -224816252 + L2 LINE L2 2663 2702 -570 2301 84 7 3 chr2 25871602 25871899 -224815955 + AluSc SINE Alu 1 298 -11 784 286 106 83 chr2 25871899 25871921 -224815933 + L2 LINE L2 2702 2722 -550 2071 130 0 3 chr2 25871921 25872214 -224815640 - AluSc SINE Alu -17 292 1 784 286 106 83 chr2 25872214 25872724 -224815130 + L2 LINE L2 2722 3271 -1 835 159 0 8 chr2 25872800 25872926 -224814928 + AluJb SINE Alu 2 126 -186 1846 164 3 0 chr2 25873152 25873445 -224814409 + AluJb SINE Alu 3 296 -16 22 80 0 0 chr2 25873462 25873512 -224814342 + AT_rich Low_complexity Low_complexity 1 50 0 2430 76 0 17 chr2 25873534 25873835 -224814019 - AluSp SINE Alu -17 296 1 396 0 0 0 chr2 25873867 25873911 -224813943 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 2089 97 49 3 chr2 25873922 25874210 -224813644 + AluSq SINE Alu 1 301 -12 321 296 64 29 chr2 25874294 25874466 -224813388 - MIR SINE MIR -50 212 35 1896 138 0 3 chr2 25874633 25874936 -224812918 + AluSx SINE Alu 1 302 0 872 181 0 0 chr2 25875113 25875246 -224812608 + FLAM_C SINE Alu 1 133 0 2091 94 44 10 chr2 25875251 25875548 -224812306 + AluSx SINE Alu 1 307 -5 1064 271 61 47 chr2 25876313 25876626 -224811228 + L2 LINE L2 2464 2771 -542 2367 109 0 3 chr2 25876626 25876938 -224810916 + AluSx SINE Alu 1 311 -1 1064 271 61 47 chr2 25876938 25877405 -224810449 + L2 LINE L2 2771 3264 -49 2226 106 0 3 chr2 25877405 25877706 -224810148 + AluSc SINE Alu 1 300 -9 1064 271 61 47 chr2 25877706 25877757 -224810097 + L2 LINE L2 3264 3313 0 1877 158 16 22 chr2 25877792 25878103 -224809751 - AluJb SINE Alu -3 309 1 2365 81 3 0 chr2 25878141 25878439 -224809415 - AluSp SINE Alu -14 299 1 1187 132 6 0 chr2 25879232 25879399 -224808455 - AluSp SINE Alu -27 286 119 2690 33 0 0 chr2 25879554 25879854 -224808000 - AluY SINE Alu -11 300 1 577 151 23 0 chr2 25880065 25880151 -224807703 - FLAM_C SINE Alu -19 124 37 24 32 0 0 chr2 25880165 25880196 -224807658 + AT_rich Low_complexity Low_complexity 1 31 0 2527 79 0 0 chr2 25880358 25880662 -224807192 + AluSp SINE Alu 1 304 -9 810 144 0 8 chr2 25880914 25881032 -224806822 - FLAM_C SINE Alu -25 118 2 4781 176 65 57 chr2 25881205 25881719 -224806135 - L1MD2 LINE L1 0 6359 5851 2118 104 0 21 chr2 25881719 25882037 -224805817 - AluSx SINE Alu 0 312 1 2240 101 0 26 chr2 25882039 25882347 -224805507 - AluSx SINE Alu -12 300 1 4781 176 65 57 chr2 25882347 25882922 -224804932 - L1MD2 LINE L1 -508 5851 5266 1509 168 95 4 chr2 25882922 25883196 -224804658 + AluJb SINE Alu 1 299 -13 4781 176 65 57 chr2 25883196 25883563 -224804291 - L1MD2 LINE L1 -1093 5266 4903 2187 104 37 0 chr2 25883714 25884013 -224803841 - AluSq SINE Alu -3 310 1 1442 234 122 54 chr2 25884145 25884828 -224803026 - HAL1 LINE L1 -443 2064 1336 520 260 53 159 chr2 25884839 25884960 -224802894 - HAL1 LINE L1 -1344 1163 1031 1249 206 126 8 chr2 25884960 25885222 -224802632 - AluJb SINE Alu -9 293 1 1790 145 3 68 chr2 25885227 25885551 -224802303 - AluJb SINE Alu -8 304 2 520 260 53 159 chr2 25885551 25885781 -224802073 - HAL1 LINE L1 -1480 1027 774 2154 90 0 30 chr2 25885781 25886081 -224801773 + AluSc SINE Alu 1 291 -18 2443 70 0 3 chr2 25886091 25886391 -224801463 + AluSg SINE Alu 1 299 -11 520 260 53 159 chr2 25886391 25886416 -224801438 - HAL1 LINE L1 -1742 765 739 1645 178 0 27 chr2 25886416 25886709 -224801145 + AluJo SINE Alu 6 290 -22 520 260 53 159 chr2 25886709 25887147 -224800707 - HAL1 LINE L1 -1768 739 419 2123 94 56 3 chr2 25888031 25888317 -224799537 - AluSg SINE Alu -9 301 1 207 182 0 0 chr2 25888317 25888350 -224799504 + T-rich Low_complexity Low_complexity 5 37 0 2370 91 0 19 chr2 25888351 25888669 -224799185 - AluSx SINE Alu 0 312 1 1057 96 0 0 chr2 25888669 25888805 -224799049 - AluSq/x SINE Alu -176 136 1 406 222 46 9 chr2 25888978 25889086 -224798768 - L1MC4 LINE L1 -3 8039 7928 1069 171 0 0 chr2 25889144 25889308 -224798546 + AluJb SINE Alu 131 294 -18 267 333 32 24 chr2 25889390 25889516 -224798338 - L2 LINE L2 -3 3269 3143 1114 134 6 34 chr2 25889666 25889707 -224798147 - AluSx SINE Alu -138 174 133 2049 128 14 3 chr2 25889707 25890004 -224797850 - AluSx SINE Alu -12 300 1 1114 134 6 34 chr2 25890004 25890141 -224797713 - AluSx SINE Alu -179 133 1 1981 149 17 0 chr2 25890210 25890506 -224797348 - AluJo SINE Alu -11 301 1 2250 114 0 0 chr2 25890506 25890812 -224797042 - AluSc SINE Alu -3 306 1 1663 184 24 3 chr2 25890949 25891237 -224796617 - AluJo SINE Alu -18 294 1 304 295 181 31 chr2 25891375 25891598 -224796256 - L2 LINE L2 -896 2418 2129 1017 157 48 6 chr2 25891598 25891764 -224796090 + FAM SINE Alu 1 173 -2 304 295 181 31 chr2 25891764 25891865 -224795989 - L2 LINE L2 -1185 2129 2045 183 42 0 0 chr2 25891932 25891956 -224795898 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1892 134 0 3 chr2 25891956 25892239 -224795615 - AluSx SINE Alu -30 282 1 207 227 68 0 chr2 25892341 25892385 -224795469 + L2 LINE L2 3216 3262 -10 914 266 87 42 chr2 25892387 25892722 -224795132 + L2 LINE L2 2440 2789 -525 740 213 0 29 chr2 25892736 25892872 -224794982 - FLAM_A SINE Alu -5 137 6 868 275 104 45 chr2 25892886 25893326 -224794528 + L2 LINE L2 2811 3276 -37 186 234 0 21 chr2 25893410 25893457 -224794397 + MIR SINE MIR 210 255 -7 233 211 333 26 chr2 25893592 25893706 -224794148 - L2 LINE L2 0 3313 3165 1039 167 28 3 chr2 25893855 25894056 -224793798 + L1MB2 LINE L1 5551 5758 -413 804 109 67 124 chr2 25894051 25894261 -224793593 + L1MB2 LINE L1 5971 6168 -3 * 582 255 20 108 chr2 25894506 25894586 -224793268 - MIR SINE MIR -15 247 162 2368 63 14 0 chr2 25894586 25894903 -224792951 - AluY SINE Alu 0 311 1 582 255 20 108 chr2 25894903 25895091 -224792763 - MIR SINE MIR -100 162 1 1860 146 0 34 chr2 25895409 25895732 -224792122 - AluJb SINE Alu 0 312 1 1099 233 111 30 chr2 25895735 25896006 -224791848 - AluJo SINE Alu -9 293 1 814 187 193 0 chr2 25896082 25896253 -224791601 - AluJb SINE Alu -22 290 87 21 36 0 0 chr2 25896470 25896498 -224791356 + AT_rich Low_complexity Low_complexity 1 28 0 2036 138 0 10 chr2 25896712 25897036 -224790818 + AluSx SINE Alu 2 312 0 2208 123 0 0 chr2 25897148 25897448 -224790406 + AluSq SINE Alu 1 300 -13 1236 242 184 37 chr2 25897617 25898119 -224789735 - L1MC4 LINE L1 0 8042 7421 1548 135 0 32 chr2 25898119 25898371 -224789483 - AluSx SINE Alu -22 290 47 1236 242 184 37 chr2 25898371 25898520 -224789334 - L1MC4 LINE L1 -621 7421 7295 1443 150 32 80 chr2 25898649 25898962 -224788892 - AluJb SINE Alu -14 298 1 1522 158 0 50 chr2 25899080 25899377 -224788477 + AluJo SINE Alu 1 282 -30 201 147 0 0 chr2 25899521 25899555 -224788299 + (A)n Simple_repeat Simple_repeat 1 34 0 25 0 0 0 chr2 25899662 25899687 -224788167 + AT_rich Low_complexity Low_complexity 1 25 0 366 196 9 89 chr2 25899754 25899866 -224787988 + MER114 LTR ERV 546 648 0 2313 109 106 0 chr2 25900750 25901089 -224786765 - THE1C LTR MaLR 0 375 1 2293 107 3 0 chr2 25901093 25901392 -224786462 - AluSx SINE Alu -7 305 6 930 146 0 0 chr2 25901395 25901532 -224786322 - AluJo SINE Alu -175 137 1 284 291 163 47 chr2 25902389 25902736 -224785118 - L2 LINE L2 -221 3051 2661 338 248 124 0 chr2 25902914 25903019 -224784835 + MIR3 SINE MIR 37 154 -54 2039 100 43 33 chr2 25903714 25904014 -224783840 + AluSg SINE Alu 1 303 -7 2037 137 0 3 chr2 25904029 25904322 -224783532 - AluSx SINE Alu -20 292 1 206 289 186 0 chr2 25904876 25904973 -224782881 - MIR SINE MIR -100 162 48 2502 186 146 19 chr2 25905144 25905721 -224782133 + Charlie1a DNA MER1_type 1 652 -799 2291 101 0 3 chr2 25905721 25906018 -224781836 + AluSx SINE Alu 1 296 -16 873 174 0 13 chr2 25906055 25906204 -224781650 + FRAM SINE Alu 20 166 -10 2606 171 100 106 chr2 25906208 25906452 -224781402 + Charlie1a DNA MER1_type 650 894 -1867 2147 109 3 0 chr2 25906452 25906735 -224781119 + AluSc SINE Alu 1 284 -25 210 37 0 0 chr2 25906742 25906769 -224781085 + (TAA)n Simple_repeat Simple_repeat 3 29 0 2606 171 100 106 chr2 25906769 25907327 -224780527 + Charlie1a DNA MER1_type 900 1455 0 456 288 40 17 chr2 25907818 25907982 -224779872 - LTR33A LTR ERVL -361 185 24 2333 101 0 19 chr2 25908717 25909034 -224778820 - AluSq SINE Alu -2 311 1 676 203 222 24 chr2 25909060 25909267 -224778587 + MIR SINE MIR 8 255 -7 504 252 71 32 chr2 25910413 25910637 -224777217 - MIR SINE MIR -14 248 16 2351 74 30 0 chr2 25910977 25911276 -224776578 + AluSq SINE Alu 1 308 -5 2083 137 0 0 chr2 25912013 25912313 -224775541 + AluY SINE Alu 1 300 -11 2201 221 65 0 chr2 25912333 25912854 -224775000 + L1M4 LINE L1 4310 4864 -1282 321 256 236 20 chr2 25912899 25913153 -224774701 + L1MEc LINE L1 1237 1545 -4851 3108 198 78 74 chr2 25913153 25913223 -224774631 + L1MC4a LINE L1 6240 6308 -1500 1904 158 11 0 chr2 25913223 25913508 -224774346 + AluSx SINE Alu 1 288 -24 3108 198 78 74 chr2 25913508 25913626 -224774228 + L1MC4a LINE L1 6308 6424 -1384 368 70 0 18 chr2 25913626 25913683 -224774171 + (CA)n Simple_repeat Simple_repeat 2 57 0 3108 198 78 74 chr2 25913683 25913975 -224773879 + L1MC4a LINE L1 6424 6713 -1095 2000 137 27 0 chr2 25913975 25914275 -224773579 - AluJo SINE Alu -4 308 1 3108 198 78 74 chr2 25914275 25914757 -224773097 + L1MC4a LINE L1 6713 7208 -600 303 179 0 0 chr2 25914808 25914864 -224772990 + L1MD3 LINE L1 7599 7654 -341 962 147 125 85 chr2 25914872 25915096 -224772758 - AluJo SINE Alu -60 252 20 1950 190 82 74 chr2 25915125 25915247 -224772607 + L1MD3 LINE L1 7405 7524 -471 2452 107 42 20 chr2 25915247 25915601 -224772253 + THE1B LTR MaLR 1 362 -2 1950 190 82 74 chr2 25915601 25916062 -224771792 + L1MD3 LINE L1 7524 7993 -2 1470 226 63 52 chr2 25916094 25916634 -224771220 + L1MEc LINE L1 1531 2076 -4320 1113 169 111 43 chr2 25916630 25916909 -224770945 + L1MEc LINE L1 2357 2654 -3561 * 1850 237 152 30 chr2 25916906 25917678 -224770176 + L1MEc LINE L1 3535 4400 -1815 212 156 0 89 chr2 25917702 25917792 -224770062 + C-rich Low_complexity Low_complexity 5 86 0 978 146 0 7 chr2 25917805 25917956 -224769898 - AluSg/x SINE Alu -38 272 123 1128 145 0 6 chr2 25917959 25918131 -224769723 - AluSx SINE Alu -138 174 4 796 190 42 14 chr2 25918134 25918350 -224769504 + L1MEc LINE L1 4388 4609 -1606 720 274 85 0 chr2 25918352 25918553 -224769301 + L2 LINE L2 2864 3081 -232 258 171 85 49 chr2 25919440 25919522 -224768332 + L1MEc LINE L1 5189 5273 -942 2150 120 3 3 chr2 25919522 25919822 -224768032 + AluSx SINE Alu 1 300 -12 612 144 0 0 chr2 25919841 25919938 -224767916 + MER50 LTR ERV1 508 604 -130 308 219 37 12 chr2 25919948 25920030 -224767824 + L1MEc LINE L1 5262 5345 -870 2340 96 7 7 chr2 25920030 25920333 -224767521 + AluSp SINE Alu 1 303 -10 1597 137 122 11 chr2 25920348 25920610 -224767244 + AluSq SINE Alu 1 291 -22 3384 180 60 62 chr2 25920610 25921454 -224766400 + L1MB5 LINE L1 5323 6165 -9 356 307 200 9 chr2 25921475 25921690 -224766164 + MIR SINE MIR 7 262 0 235 274 0 32 chr2 25921690 25921737 -224766117 + (CTG)n Simple_repeat Simple_repeat 2 48 -13 2198 96 4 0 chr2 25921737 25922017 -224765837 - AluSq SINE Alu -32 281 1 235 274 0 32 chr2 25922017 25922031 -224765823 + (CTG)n Simple_repeat Simple_repeat 48 61 0 404 209 76 9 chr2 25922041 25922146 -224765708 + MIR SINE MIR 125 236 -26 254 292 67 11 chr2 25922226 25922315 -224765539 - MIR SINE MIR -70 138 45 2033 88 0 39 chr2 25922953 25923238 -224764616 - AluSg SINE Alu -36 274 1 2282 105 7 0 chr2 25923458 25923754 -224764100 + AluSx SINE Alu 1 298 -14 390 240 127 75 chr2 25924134 25924401 -224763453 - HAL1 LINE L1 -379 2128 1848 901 268 175 2 chr2 25924461 25924912 -224762942 - HAL1 LINE L1 -789 1718 1190 1786 170 0 23 chr2 25924967 25925273 -224762581 + AluSx SINE Alu 1 299 -13 247 315 18 64 chr2 25925707 25925926 -224761928 - L2 LINE L2 -353 2961 2753 963 251 212 40 chr2 25925928 25926205 -224761649 - L2 LINE L2 -1004 2310 2082 2170 135 0 0 chr2 25926205 25926509 -224761345 + AluSx SINE Alu 1 304 -8 963 251 212 40 chr2 25926509 25926577 -224761277 - L2 LINE L2 -1232 2082 2027 549 0 0 0 chr2 25926577 25926638 -224761216 + (TG)n Simple_repeat Simple_repeat 2 62 0 963 251 212 40 chr2 25926638 25926790 -224761064 - L2 LINE L2 -1287 2027 1726 1745 177 23 16 chr2 25928194 25928504 -224759350 - AluJb SINE Alu 0 312 1 184 79 79 0 chr2 25928534 25928572 -224759282 + (CATTT)n Simple_repeat Simple_repeat 2 42 0 2260 108 0 0 chr2 25928572 25928867 -224758987 - AluSq SINE Alu -18 295 1 2111 121 0 0 chr2 25928885 25929174 -224758680 - AluSx SINE Alu -23 289 1 344 279 48 0 chr2 25929282 25929386 -224758468 - L1MEd LINE L1 -5406 713 605 362 265 103 101 chr2 25929439 25929641 -224758213 - L1MEd LINE L1 -5680 439 239 2450 71 0 0 chr2 25929641 25929935 -224757919 + AluY SINE Alu 1 294 -17 1776 171 7 3 chr2 25929944 25930248 -224757606 + AluJb SINE Alu 1 305 -7 362 265 103 101 chr2 25930248 25930462 -224757392 - L1MEd LINE L1 -5887 232 12 477 104 0 0 chr2 25930702 25930779 -224757075 + (TGGA)n Simple_repeat Simple_repeat 1 77 0 1697 206 105 75 chr2 25931045 25931255 -224756599 - L1M4 LINE L1 -3128 3018 2816 1804 149 27 7 chr2 25931255 25931550 -224756304 + AluJb SINE Alu 1 301 -11 1697 206 105 75 chr2 25931550 25931589 -224756265 - L1M4 LINE L1 -3330 2816 2780 2252 99 0 13 chr2 25931589 25931892 -224755962 - AluSx SINE Alu -12 300 2 1697 206 105 75 chr2 25931892 25932278 -224755576 - L1M4 LINE L1 -3366 2780 2363 1816 146 3 61 chr2 25932394 25932754 -224755100 - AluJb SINE Alu 0 341 1 366 310 65 13 chr2 25933219 25933374 -224754480 + MIR SINE MIR 65 227 -35 771 197 43 64 chr2 25933604 25933837 -224754017 - L1ME1 LINE L1 -5 6161 5934 2483 74 0 7 chr2 25933848 25934157 -224753697 - AluY SINE Alu -4 307 1 450 276 97 25 chr2 25935195 25935391 -224752463 - L2 LINE L2 -96 3217 3008 356 276 95 9 chr2 25935414 25935530 -224752324 - L2 LINE L2 -2 3311 3186 374 258 208 6 chr2 25936483 25936661 -224751193 + L2 LINE L2 3100 3313 0 2538 74 0 0 chr2 25936744 25937053 -224750801 - AluY SINE Alu -2 309 1 246 281 104 21 chr2 25937406 25937502 -224750352 - MIR SINE MIR -138 124 21 206 254 0 79 chr2 25937511 25937574 -224750280 + L2 LINE L2 3215 3272 0 4516 162 46 26 chr2 25937894 25939053 -224748801 - L1MB8 LINE L1 0 6178 4995 2441 70 0 0 chr2 25939053 25939352 -224748502 - AluY SINE Alu -12 299 1 4516 162 46 26 chr2 25939352 25939471 -224748383 - L1MB8 LINE L1 -1183 4995 4880 299 200 53 13 chr2 25939474 25939549 -224748305 - L2 LINE L2 -566 2748 2671 534 287 84 45 chr2 25939580 25939684 -224748170 - L2 LINE L2 -1225 2089 1990 2071 117 50 13 chr2 25939684 25939983 -224747871 + AluSx SINE Alu 1 310 -2 534 287 84 45 chr2 25939983 25940023 -224747831 - L2 LINE L2 -1324 1990 1953 1829 196 20 12 chr2 25940023 25940365 -224747489 + MER7A DNA MER2_type 1 343 -3 534 287 84 45 chr2 25940365 25940529 -224747325 - L2 LINE L2 -1361 1953 1768 2208 206 47 58 chr2 25940535 25940919 -224746935 + L1MD2 LINE L1 4614 5001 -1358 2170 122 3 0 chr2 25940919 25941215 -224746639 + AluSx SINE Alu 1 297 -15 2208 206 47 58 chr2 25941215 25941279 -224746575 + L1MD2 LINE L1 5001 5064 -1295 2315 113 0 0 chr2 25941279 25941581 -224746273 + AluSx SINE Alu 1 302 -10 2208 206 47 58 chr2 25941581 25941829 -224746025 + L1MD2 LINE L1 5064 5313 -1046 2304 97 0 13 chr2 25941829 25942138 -224745716 + AluSq SINE Alu 1 305 -8 2208 206 47 58 chr2 25942138 25943124 -224744730 + L1MD2 LINE L1 5313 6349 -10 2025 128 7 0 chr2 25943195 25943525 -224744329 - AluSx SINE Alu 0 332 1 333 185 93 9 chr2 25943527 25943635 -224744219 - L2 LINE L2 -1604 1710 1594 21 36 0 0 chr2 25943830 25943858 -224743996 + AT_rich Low_complexity Low_complexity 1 28 0 2205 119 0 3 chr2 25944370 25944672 -224743182 + AluSx SINE Alu 1 301 -11 2002 164 0 10 chr2 25945011 25945321 -224742533 - AluSx SINE Alu -5 307 1 26 0 0 0 chr2 25945598 25945624 -224742230 + AT_rich Low_complexity Low_complexity 1 26 0 2435 67 3 7 chr2 25945638 25945937 -224741917 + AluSp SINE Alu 1 298 -15 2048 260 31 40 chr2 25946074 25946721 -224741133 - MER21B LTR ERV1 -125 738 98 1040 177 0 0 chr2 25946935 25947093 -224740761 + FRAM SINE Alu 4 161 -15 2118 121 3 13 chr2 25947114 25947420 -224740434 + AluSq SINE Alu 1 303 -10 4613 209 63 41 chr2 25947440 25947606 -224740248 + L1MB7 LINE L1 3776 3937 -2209 2244 103 0 3 chr2 25947606 25947897 -224739957 + AluSx SINE Alu 1 290 -22 4613 209 63 41 chr2 25947897 25948924 -224738930 + L1MB7 LINE L1 3937 5000 -1146 1925 149 9 44 chr2 25948924 25949240 -224738614 + AluJb SINE Alu 1 305 -7 4613 209 63 41 chr2 25949240 25949291 -224738563 + L1MB7 LINE L1 5000 5048 -1098 267 221 13 26 chr2 25949292 25949369 -224738485 + L1MB7 LINE L1 5129 5204 -942 3402 167 50 31 chr2 25949369 25950086 -224737768 + L1MB7 LINE L1 5454 6184 0 294 150 0 0 chr2 25950120 25950160 -224737694 - MER8 DNA MER2_type 0 239 200 2135 99 0 30 chr2 25950176 25950478 -224737376 - AluSg SINE Alu -13 297 5 24 0 0 0 chr2 25950487 25950511 -224737343 + AT_rich Low_complexity Low_complexity 1 24 0 652 240 0 8 chr2 25950511 25950632 -224737222 - FLAM_A SINE Alu -13 120 1 622 200 38 81 chr2 25950633 25950836 -224737018 - MER8 DNA MER2_type -33 206 12 2552 68 0 0 chr2 25950864 25951171 -224736683 - AluY SINE Alu -4 307 1 424 139 0 38 chr2 25951171 25951250 -224736604 - FLAM_C SINE Alu 0 143 68 2400 63 0 25 chr2 25951648 25951965 -224735889 + AluY SINE Alu 3 311 0 2235 92 3 3 chr2 25952293 25952585 -224735269 - AluSg SINE Alu -18 292 1 543 153 24 0 chr2 25952639 25952724 -224735130 - AluJb SINE Alu -22 290 204 323 220 94 29 chr2 25952939 25953076 -224734778 + MER20 DNA MER1_type 3 219 0 1725 161 27 34 chr2 25953440 25953738 -224734116 + AluJo SINE Alu 1 296 -16 1577 194 27 3 chr2 25953840 25954133 -224733721 - AluJo SINE Alu -11 301 2 2407 86 0 3 chr2 25954904 25955205 -224732649 - AluY SINE Alu -11 300 1 2066 140 0 0 chr2 25955232 25955525 -224732329 - AluSx SINE Alu -17 295 3 14449 129 95 22 chr2 25955641 25955671 -224732183 + Tigger2 DNA MER2_type 26 52 -2666 784 173 0 16 chr2 25955671 25955798 -224732056 - FLAM_A SINE Alu -8 125 1 14449 129 95 22 chr2 25955798 25956662 -224731192 + Tigger2 DNA MER2_type 52 852 -1866 2574 47 7 0 chr2 25956662 25956962 -224730892 + AluY SINE Alu 1 302 -9 14449 129 95 22 chr2 25956962 25958577 -224729277 + Tigger2 DNA MER2_type 852 2718 0 968 185 0 5 chr2 25958671 25958894 -224728960 - AluJo SINE Alu 0 344 123 4858 186 59 12 chr2 25958900 25959750 -224728104 - L1MB3 LINE L1 0 6183 5375 1712 156 7 21 chr2 25959750 25960032 -224727822 - AluJb SINE Alu -3 309 32 4858 186 59 12 chr2 25960032 25960611 -224727243 - L1MB3 LINE L1 -808 5375 4676 1772 133 3 53 chr2 25960611 25960913 -224726941 + AluSx SINE Alu 1 287 -25 4858 186 59 12 chr2 25960913 25960996 -224726858 - L1MB3 LINE L1 -1507 4676 4598 2134 160 9 0 chr2 25962387 25962718 -224725136 - MER1B DNA MER1_type 0 339 6 2355 94 3 0 chr2 25963306 25963613 -224724241 + AluSc SINE Alu 1 308 -1 25 31 0 0 chr2 25963683 25963715 -224724139 + AT_rich Low_complexity Low_complexity 1 32 0 648 236 115 0 chr2 25964625 25964782 -224723072 - FAM SINE Alu 0 175 1 1096 201 121 26 chr2 25964794 25965058 -224722796 - AluJo SINE Alu -18 294 6 1210 118 148 15 chr2 25965487 25965690 -224722164 + MER30 DNA MER1_type 1 230 0 973 253 91 83 chr2 25966159 25966574 -224721280 - L1MC/D LINE L1 -1992 5816 5395 2203 105 3 0 chr2 25966574 25966868 -224720986 - AluSq SINE Alu -18 295 1 973 253 91 83 chr2 25966868 25966969 -224720885 - L1MC/D LINE L1 -2413 5395 5296 33 0 0 0 chr2 25967477 25967510 -224720344 + AT_rich Low_complexity Low_complexity 1 33 0 1087 216 80 31 chr2 25967598 25967922 -224719932 + L1ME3 LINE L1 5822 6161 -1 2349 103 0 0 chr2 25967977 25968289 -224719565 - AluSx SINE Alu 0 312 1 365 233 120 8 chr2 25968290 25968423 -224719431 - L1ME4a LINE L1 -6 6115 5968 1670 161 4 7 chr2 25968458 25968732 -224719122 - AluJo SINE Alu -39 273 1 2529 55 0 22 chr2 25972156 25972468 -224715386 + AluY SINE Alu 1 305 -6 2498 67 10 0 chr2 25972473 25972772 -224715082 + AluSx SINE Alu 1 302 -10 2590 87 0 0 chr2 25973026 25973337 -224714517 + AluSx SINE Alu 2 312 0 288 277 0 0 chr2 25973925 25973990 -224713864 - MIR SINE MIR -152 110 46 2558 64 6 3 chr2 25974771 25975083 -224712771 - AluSp SINE Alu 0 313 1 2398 83 0 3 chr2 25975099 25975400 -224712454 - AluSc SINE Alu -9 300 1 1475 209 123 90 chr2 25975747 25976436 -224711418 + L1MC5 LINE L1 6731 7442 -519 2085 122 0 7 chr2 25976596 25976884 -224710970 - AluSx SINE Alu -26 286 1 1738 175 0 45 chr2 25977024 25977332 -224710522 + AluJb SINE Alu 1 294 -18 576 310 148 36 chr2 25977475 25977859 -224709995 - LTR67 LTR ERVL -129 428 2 181 208 146 0 chr2 25977864 25977912 -224709942 + MER5B DNA MER1_type 1 55 -123 620 218 8 0 chr2 25977927 25978051 -224709803 + FLAM_C SINE Alu 7 131 -12 228 243 184 19 chr2 25978054 25978157 -224709697 - MER5B DNA MER1_type -55 123 4 306 278 28 28 chr2 25978175 25978283 -224709571 + MER5A DNA MER1_type 9 116 -73 2195 112 23 0 chr2 25978736 25979039 -224708815 + AluSx SINE Alu 3 312 0 2348 104 0 0 chr2 25979043 25979340 -224708514 + AluSg SINE Alu 1 297 -13 334 302 101 92 chr2 25979687 25980299 -224707555 + HAL1 LINE L1 45 662 -1845 1113 160 11 0 chr2 25980457 25980638 -224707216 + AluSc SINE Alu 127 309 0 496 260 114 62 chr2 25980702 25980929 -224706925 + HAL1 LINE L1 874 1112 -1395 2234 116 0 38 chr2 25980930 25981249 -224706605 + AluSx SINE Alu 1 307 -5 551 54 0 0 chr2 25981256 25981330 -224706524 + MSTD LTR MaLR 323 396 0 429 247 107 27 chr2 25981380 25981530 -224706324 + HAL1 LINE L1 1611 1772 -735 376 240 39 10 chr2 25981714 25981818 -224706036 + L2 LINE L2 3201 3307 -6 1646 188 18 3 chr2 25981818 25982100 -224705754 + AluJo SINE Alu 1 286 -26 243 0 0 0 chr2 25982100 25982106 -224705748 + (TG)n Simple_repeat Simple_repeat 1 33 0 243 0 0 0 chr2 25982106 25982133 -224705721 + (TG)n Simple_repeat Simple_repeat 2 28 0 2202 94 0 4 chr2 25982476 25982752 -224705102 - AluSx SINE Alu -17 295 21 953 261 35 32 chr2 25982752 25983062 -224704792 + L2 LINE L2 3002 3312 -1 207 0 0 0 chr2 25983220 25983243 -224704611 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 817 159 23 0 chr2 25983274 25983406 -224704448 + AluJb SINE Alu 1 135 -177 2233 99 26 10 chr2 25984069 25984372 -224703482 - AluSg SINE Alu -2 308 1 2148 140 0 6 chr2 25985081 25985395 -224702459 - AluSx SINE Alu 0 312 1 21 57 0 0 chr2 25985408 25985443 -224702411 + AT_rich Low_complexity Low_complexity 1 35 0 800 97 0 0 chr2 25985443 25985546 -224702308 - AluSg/x SINE Alu -14 298 196 1245 136 0 22 chr2 25985585 25985601 -224702253 + AluJo SINE Alu 121 136 -176 2309 118 0 0 chr2 25985601 25985907 -224701947 + AluSx SINE Alu 1 306 -6 1245 136 0 22 chr2 25985907 25986074 -224701780 + AluJo SINE Alu 136 300 -12 11106 175 29 26 chr2 25986277 25987496 -224700358 + L1MB1 LINE L1 2737 3951 -2217 2420 105 3 0 chr2 25987496 25987800 -224700054 + AluSx SINE Alu 1 305 -7 11106 175 29 26 chr2 25987800 25989751 -224698103 + L1MB1 LINE L1 3951 5921 -247 2394 112 3 0 chr2 25989751 25990063 -224697791 + AluSq SINE Alu 1 313 0 11106 175 29 26 chr2 25990063 25990278 -224697576 + L1MB1 LINE L1 5921 6134 -34 1695 127 42 81 chr2 25990278 25990585 -224697269 + AluJo SINE Alu 1 295 -17 2076 117 7 0 chr2 25990634 25990948 -224696906 - AluSq SINE Alu 0 316 1 4084 148 28 79 chr2 25990972 25991212 -224696642 + L1MB5 LINE L1 5272 5523 -651 2427 67 3 3 chr2 25991212 25991511 -224696343 + AluY SINE Alu 1 299 -12 4084 148 28 79 chr2 25991511 25992140 -224695714 + L1MB5 LINE L1 5523 6092 -82 2077 150 0 16 chr2 25992140 25992453 -224695401 - AluJo SINE Alu -4 308 1 4084 148 28 79 chr2 25992453 25992533 -224695321 + L1MB5 LINE L1 6092 6174 0 1510 118 18 109 chr2 25992583 25992914 -224694940 - MER50 LTR ERV1 -1 733 433 1248 140 13 42 chr2 25992908 25993029 -224694825 - MER50 LTR ERV1 -505 229 117 * 2359 95 0 25 chr2 25993029 25993344 -224694510 + AluSx SINE Alu 1 307 -5 1248 140 13 42 chr2 25993344 25993458 -224694396 - MER50 LTR ERV1 -617 117 1 2307 125 0 0 chr2 25993485 25993797 -224694057 + AluSx SINE Alu 1 312 0 1798 83 8 43 chr2 25994059 25994313 -224693541 + AluSx SINE Alu 51 295 -17 1402 201 3 15 chr2 25994542 25994871 -224692983 - L1M4 LINE L1 -1033 5113 4789 2640 55 7 0 chr2 25995007 25995316 -224692538 - AluY SINE Alu 0 311 1 1906 100 130 0 chr2 25995462 25995723 -224692131 - AluSx SINE Alu -17 295 1 2105 113 44 0 chr2 25995802 25996095 -224691759 + AluSx SINE Alu 1 306 -6 2314 111 0 0 chr2 25997413 25997719 -224690135 + AluSx SINE Alu 2 307 -5 703 189 8 0 chr2 25998254 25998381 -224689473 + FLAM_A SINE Alu 2 129 -4 21 36 0 0 chr2 25998381 25998409 -224689445 + AT_rich Low_complexity Low_complexity 1 28 0 1727 167 36 16 chr2 25999253 25999559 -224688295 - AluJo SINE Alu 0 312 1 1811 189 27 30 chr2 25999594 25999842 -224688012 + MER63B DNA MER1_type 1 249 -813 880 178 12 0 chr2 25999842 26000005 -224687849 + FRAM SINE Alu 1 165 -1 1811 189 27 30 chr2 26000005 26000157 -224687697 + MER63B DNA MER1_type 249 400 -36 2141 130 7 0 chr2 26000171 26000471 -224687383 - AluSx SINE Alu -10 302 1 2055 138 10 0 chr2 26000781 26001079 -224686775 - AluJb SINE Alu -11 301 1 2566 87 0 3 chr2 26001086 26001398 -224686456 - AluSq SINE Alu -2 311 1 351 186 58 106 chr2 26001429 26001617 -224686237 + L1MC5 LINE L1 7206 7384 -577 311 197 0 0 chr2 26001624 26001690 -224686164 + MER63B DNA MER1_type 332 397 -38 2170 130 0 13 chr2 26001748 26002049 -224685805 - AluSx SINE Alu -10 302 6 493 186 124 0 chr2 26002125 26002238 -224685616 + FLAM_A SINE Alu 1 127 -6 536 165 148 9 chr2 26002284 26002399 -224685455 + AluJo/FLAM SINE Alu 3 133 -179 2112 111 47 3 chr2 26002401 26002699 -224685155 + AluSx SINE Alu 1 311 -1 460 170 28 0 chr2 26002702 26002808 -224685046 + L1MB8 LINE L1 6064 6172 -6 245 119 0 51 chr2 26002813 26002872 -224684982 + Alu SINE Alu 247 302 0 251 316 32 25 chr2 26002891 26003049 -224684805 + L1MC5 LINE L1 7778 7936 -25 1935 131 4 0 chr2 26003351 26003619 -224684235 - AluJb SINE Alu -16 296 28 2272 80 0 100 chr2 26004817 26005156 -224682698 - AluSx SINE Alu -7 305 1 401 307 7 7 chr2 26005376 26005526 -224682328 + MIR3 SINE MIR 34 183 -25 1392 76 4 143 chr2 26005670 26005908 -224681946 + AluSx SINE Alu 48 252 -60 2172 120 0 7 chr2 26006149 26006458 -224681396 + AluSx SINE Alu 1 307 -5 232 152 43 0 chr2 26006748 26006794 -224681060 + MIR SINE MIR 102 149 -113 469 187 0 101 chr2 26007067 26007265 -224680589 + G-rich Low_complexity Low_complexity 1 178 0 184 80 0 93 chr2 26007300 26007375 -224680479 + (CGGGGG)n Simple_repeat Simple_repeat 2 69 0 38 101 0 0 chr2 26007402 26007531 -224680323 + GC_rich Low_complexity Low_complexity 1 129 0 202 270 0 27 chr2 26007922 26007996 -224679858 + C-rich Low_complexity Low_complexity 2 73 0 240 35 0 0 chr2 26009391 26009420 -224678434 + (CA)n Simple_repeat Simple_repeat 1 29 0 381 276 26 0 chr2 26011425 26011541 -224676313 - MIR3 SINE MIR -52 156 38 364 338 93 0 chr2 26011665 26011816 -224676038 - MIR SINE MIR -12 250 86 701 171 16 0 chr2 26011830 26011959 -224675895 - FLAM_C SINE Alu -2 131 1 1848 113 35 0 chr2 26011986 26012242 -224675612 - AluSq SINE Alu -48 265 1 1199 183 30 104 chr2 26012608 26012936 -224674918 + AluJo SINE Alu 9 312 0 200 189 0 0 chr2 26013191 26013228 -224674626 + G-rich Low_complexity Low_complexity 3 39 0 601 236 28 7 chr2 26013632 26013776 -224674078 - MIR SINE MIR -114 148 2 256 246 0 14 chr2 26014225 26014294 -224673560 + G-rich Low_complexity Low_complexity 5 72 0 2174 109 3 3 chr2 26014928 26015232 -224672622 - AluSx SINE Alu 0 304 1 254 281 94 31 chr2 26015447 26015607 -224672247 + L2 LINE L2 2715 2884 -430 296 310 140 29 chr2 26015791 26015962 -224671892 + L2 LINE L2 3124 3313 0 2040 132 11 0 chr2 26016013 26016300 -224671554 + AluJo SINE Alu 1 290 -22 310 232 160 8 chr2 26016790 26016915 -224670939 - MIR3 SINE MIR -12 196 53 1831 138 14 7 chr2 26017761 26018060 -224669794 + AluJo SINE Alu 5 305 0 36 82 0 0 chr2 26018697 26018782 -224669072 + GC_rich Low_complexity Low_complexity 1 85 0 228 189 0 40 chr2 26019279 26019353 -224668501 + (CCCG)n Simple_repeat Simple_repeat 4 74 0 24 32 0 0 chr2 26019409 26019440 -224668414 + GC_rich Low_complexity Low_complexity 1 31 0 386 113 50 75 chr2 26019958 26020038 -224667816 - MER103 DNA DNA -42 124 47 2175 111 3 13 chr2 26021009 26021315 -224666539 + AluSx SINE Alu 1 303 -9 183 162 0 0 chr2 26021983 26022020 -224665834 + CT-rich Low_complexity Low_complexity 2 38 0 513 27 147 0 chr2 26026473 26026548 -224661306 + L1PA7 LINE L1 6069 6154 0 1629 97 202 0 chr2 26026820 26027077 -224660777 + AluJb SINE Alu 1 309 -3 796 188 0 0 chr2 26027610 26027743 -224660111 - FLAM_A SINE Alu 0 133 1 800 175 40 11 chr2 26030054 26030231 -224657623 + MER5A DNA MER1_type 1 182 -7 262 302 135 10 chr2 26030364 26030556 -224657298 - MIR SINE MIR -13 249 34 576 179 50 25 chr2 26030705 26030846 -224657008 - L1ME2 LINE L1 -9 6155 6033 451 194 107 10 chr2 26030846 26030949 -224656905 - MER81 DNA DNA -1 113 1 576 179 50 25 chr2 26030949 26030962 -224656892 - L1ME2 LINE L1 -131 6033 6022 717 109 0 0 chr2 26032685 26032786 -224655068 - AluSg/x SINE Alu -6 304 204 492 282 74 79 chr2 26032787 26033086 -224654768 + L3 LINE CR1 637 935 -642 1646 173 0 65 chr2 26033086 26033212 -224654642 + AluJo SINE Alu 5 138 -174 2195 110 0 10 chr2 26033212 26033511 -224654343 - AluSg SINE Alu -14 296 1 1646 173 0 65 chr2 26033511 26033707 -224654147 + AluJo SINE Alu 138 306 -6 492 282 74 79 chr2 26033707 26033787 -224654067 + L3 LINE CR1 935 1014 -563 589 212 18 0 chr2 26033878 26033991 -224653863 + MLT1H LTR MaLR 81 195 -354 26 30 0 0 chr2 26034018 26034051 -224653803 + AT_rich Low_complexity Low_complexity 1 33 0 253 196 22 0 chr2 26034262 26034308 -224653546 + MLT1G1 LTR MaLR 479 525 -70 198 103 0 0 chr2 26034451 26034480 -224653374 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2276 105 0 3 chr2 26035051 26035347 -224652507 - AluSg SINE Alu -15 295 1 2342 81 0 23 chr2 26036104 26036414 -224651440 - AluSg1 SINE Alu -6 303 1 1973 157 7 0 chr2 26036774 26037068 -224650786 + AluSx SINE Alu 1 296 -16 23 0 0 0 chr2 26038631 26038654 -224649200 + AT_rich Low_complexity Low_complexity 1 23 0 1685 155 10 27 chr2 26038899 26039196 -224648658 - AluJo SINE Alu -13 299 8 200 268 14 14 chr2 26039223 26039294 -224648560 + L2 LINE L2 2589 2659 -655 245 241 146 36 chr2 26039783 26039853 -224648001 + L1MC/D LINE L1 5100 5161 -985 1701 133 72 29 chr2 26039853 26040132 -224647722 + AluSg SINE Alu 1 291 -19 245 241 146 36 chr2 26040132 26040335 -224647519 + L1MC/D LINE L1 5161 5403 -743 853 128 0 0 chr2 26040335 26040452 -224647402 + FLAM_C SINE Alu 2 118 -15 271 278 192 45 chr2 26040472 26040542 -224647312 + L1MC/D LINE L1 5380 5438 -2370 2349 109 0 0 chr2 26040542 26040844 -224647010 - AluSq SINE Alu -11 302 1 271 278 192 45 chr2 26040844 26041107 -224646747 + L1MC/D LINE L1 5438 5762 -2046 1666 211 0 0 chr2 26041231 26041525 -224646329 + AluJo SINE Alu 1 294 -18 1291 130 19 10 chr2 26043342 26043549 -224644305 - MER20 DNA MER1_type -8 211 3 508 296 12 12 chr2 26044488 26044657 -224643197 - MIR3 SINE MIR -3 205 37 2406 68 3 0 chr2 26044667 26044959 -224642895 - AluY SINE Alu -18 293 1 227 241 60 24 chr2 26045120 26045203 -224642651 + MIR SINE MIR 124 209 -53 261 275 101 42 chr2 26045381 26045570 -224642284 - MER112 DNA MER1_type -1 259 60 1741 161 94 0 chr2 26045673 26046002 -224641852 + MER46B DNA MER2_type 1 235 -1 1986 160 0 13 chr2 26046390 26046702 -224641152 - AluJo SINE Alu -4 308 1 569 158 123 35 chr2 26050324 26050438 -224637416 + FLAM_C SINE Alu 10 133 -10 2300 116 0 0 chr2 26050633 26050934 -224636920 - AluSx SINE Alu -9 303 3 406 306 27 27 chr2 26051049 26051235 -224636619 + L1MEc LINE L1 318 503 -5893 * 497 272 26 5 chr2 26051217 26051408 -224636446 + L1MEc LINE L1 820 1014 -5382 475 143 88 11 chr2 26051418 26051509 -224636345 + FLAM_A SINE Alu 29 126 -16 2012 251 84 46 chr2 26051516 26051934 -224635920 + L1MEc LINE L1 1068 1468 -4928 1879 160 13 32 chr2 26051934 26052246 -224635608 + AluJo SINE Alu 1 306 -6 2012 251 84 46 chr2 26052246 26052343 -224635511 + L1MEc LINE L1 1468 1560 -4836 1972 141 37 0 chr2 26052343 26052641 -224635213 + AluSq SINE Alu 1 309 -4 2012 251 84 46 chr2 26052641 26053042 -224634812 + L1MEc LINE L1 1560 1944 -4452 2277 119 7 0 chr2 26053042 26053352 -224634502 + AluSx SINE Alu 1 312 0 2012 251 84 46 chr2 26053352 26053455 -224634399 + L1MEc LINE L1 1944 2042 -4354 2170 98 7 3 chr2 26053455 26053741 -224634113 - AluSg SINE Alu -23 287 1 2012 251 84 46 chr2 26053741 26053807 -224634047 + L1MEc LINE L1 2042 2198 -4198 9100 191 46 11 chr2 26053809 26056303 -224631551 + ERVL-C1 LTR ERVL 1337 3972 -1792 2285 122 31 36 chr2 26056303 26056695 -224631159 + MLT1B LTR MaLR 1 390 0 9100 191 46 11 chr2 26056695 26056959 -224630895 + ERVL-C1 LTR ERVL 3972 4225 -1539 4389 195 32 20 chr2 26056977 26057828 -224630026 + ERVL-C1 LTR ERVL 4461 5321 -443 2173 194 92 49 chr2 26057834 26058055 -224629799 + MER76 LTR ERV 103 313 -375 2333 114 0 0 chr2 26058055 26058361 -224629493 - AluSx SINE Alu -6 306 1 2173 194 92 49 chr2 26058361 26058691 -224629163 + MER76 LTR ERV 313 678 -10 1497 181 135 3 chr2 26058729 26059077 -224628777 + ERVL-C1 LTR ERVL 5362 5755 -9 501 178 69 0 chr2 26059093 26059194 -224628660 + MLT2C1 LTR ERVL 17 124 -273 820 255 76 19 chr2 26059203 26059517 -224628337 + L1MEc LINE L1 3352 3683 -2532 456 113 0 36 chr2 26059517 26059738 -224628116 + AluSc SINE Alu 1 305 -4 4742 233 86 12 chr2 26059740 26061118 -224626736 + L1MEc LINE L1 3691 5192 -1023 1602 189 107 42 chr2 26061086 26061544 -224626310 + L1ME1 LINE L1 5023 5538 -697 * 2206 128 0 0 chr2 26061544 26061849 -224626005 + AluSx SINE Alu 1 305 -7 1602 189 107 42 chr2 26061849 26062008 -224625846 + L1ME1 LINE L1 5538 5685 -550 571 179 0 68 chr2 26062012 26062129 -224625725 + FLAM_A SINE Alu 11 119 -23 1227 152 9 42 chr2 26062129 26062346 -224625508 - AluJo SINE Alu -15 297 88 1423 198 24 49 chr2 26062354 26062450 -224625404 + L1ME1 LINE L1 5653 5750 -485 2280 115 0 0 chr2 26062450 26062745 -224625109 - AluSx SINE Alu -17 295 1 1423 198 24 49 chr2 26062745 26062977 -224624877 + L1ME1 LINE L1 5750 5973 -262 1593 179 13 47 chr2 26062993 26063294 -224624560 - AluJo SINE Alu -21 291 1 301 164 82 27 chr2 26063301 26063374 -224624480 + L1ME1 LINE L1 6128 6204 -31 1397 228 11 4 chr2 26063374 26063646 -224624208 + AluJo SINE Alu 3 276 -36 234 0 0 0 chr2 26063663 26063689 -224624165 + (CA)n Simple_repeat Simple_repeat 1 26 0 2036 121 17 7 chr2 26064147 26064437 -224623417 - AluSx SINE Alu -19 293 1 1995 124 11 7 chr2 26064952 26065255 -224622599 + AluSq SINE Alu 1 304 0 3243 176 48 59 chr2 26066057 26066801 -224621053 - L1MB5 LINE L1 -76 6098 5363 443 143 199 93 chr2 26066832 26066993 -224620861 - AluSp SINE Alu -21 292 115 252 111 0 0 chr2 26067238 26067283 -224620571 + (TG)n Simple_repeat Simple_repeat 1 45 0 261 230 96 111 chr2 26067530 26067665 -224620189 - MIR3 SINE MIR -44 164 32 202 277 24 60 chr2 26068034 26068117 -224619737 + L3 LINE CR1 1429 1508 -69 405 188 141 74 chr2 26068212 26068312 -224619542 - MER58C DNA MER1_type -2205 215 100 2299 77 16 19 chr2 26068312 26068623 -224619231 - AluSq SINE Alu -3 310 1 405 188 141 74 chr2 26068623 26068671 -224619183 - MER58C DNA MER1_type -2320 100 57 186 167 0 0 chr2 26068912 26068948 -224618906 + (TG)n Simple_repeat Simple_repeat 2 37 0 323 227 182 0 chr2 26068966 26069054 -224618800 - MIR SINE MIR -153 109 6 183 139 0 0 chr2 26069198 26069234 -224618620 + (CCCTA)n Simple_repeat Simple_repeat 2 37 0 440 216 85 51 chr2 26069356 26069532 -224618322 - L1ME4a LINE L1 -1 6120 5939 1851 175 15 18 chr2 26069545 26069888 -224617966 - MER2 DNA MER2_type 0 344 3 616 246 18 61 chr2 26070131 26070359 -224617495 - L1MC4a LINE L1 -1903 5905 5688 415 82 0 0 chr2 26070363 26070424 -224617430 - Alu SINE Alu -13 298 238 271 310 61 41 chr2 26070486 26070731 -224617123 - L1MC4a LINE L1 -449 5672 5423 180 0 0 0 chr2 26070733 26070753 -224617101 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2491 84 0 0 chr2 26070756 26071055 -224616799 + AluSc SINE Alu 1 299 -10 2318 157 66 23 chr2 26071055 26071496 -224616358 + L1MB2 LINE L1 5665 6124 -47 596 114 0 0 chr2 26071500 26071579 -224616275 + AluJ/FLAM SINE Alu 13 91 -221 839 146 26 1 chr2 26071580 26071732 -224616122 - L1MB2 LINE L1 -260 5911 5753 383 221 29 39 chr2 26071886 26071990 -224615864 - L2 LINE L2 -1 3312 3210 630 168 35 0 chr2 26072188 26072301 -224615553 - AluSg/x SINE Alu -5 304 188 227 161 0 36 chr2 26072301 26072357 -224615497 + T-rich Low_complexity Low_complexity 3 56 0 1751 131 94 0 chr2 26072380 26072655 -224615199 + AluJb SINE Alu 3 303 -9 351 0 0 0 chr2 26072700 26072739 -224615115 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 183 32 86 chr2 26072745 26072838 -224615016 + L1MA9 LINE L1 6183 6270 -42 3922 98 36 23 chr2 26072940 26073437 -224614417 + LTR38B LTR ERV1 1 509 -101 2126 93 10 7 chr2 26073437 26073726 -224614128 - AluSx SINE Alu -22 290 1 3922 98 36 23 chr2 26073726 26073830 -224614024 + LTR38B LTR ERV1 509 610 0 3217 124 23 2 chr2 26073892 26074369 -224613485 + LTR15 LTR ERV1 1 487 -6 7672 146 60 35 chr2 26074375 26076004 -224611850 + HERV15 LTR ERV1 1 1387 -7039 4019 259 22 28 chr2 26075993 26077026 -224610828 + HERV15 LTR ERV1 1701 2727 -5699 * 1761 275 98 20 chr2 26077207 26077983 -224609871 - HERV16 LTR ERVL -2759 2237 1598 323 325 0 0 chr2 26078049 26078126 -224609728 - L2 LINE L2 -58 3214 3138 2200 112 7 3 chr2 26078375 26078680 -224609174 - AluSx SINE Alu -6 306 1 1300 241 145 10 chr2 26078693 26079092 -224608762 - MER97a DNA MER1_type? -438 456 4 2185 106 0 10 chr2 26079147 26079449 -224608405 + AluSx SINE Alu 1 299 -13 361 77 0 0 chr2 26079536 26079588 -224608266 - AluSp SINE Alu 0 302 251 1842 119 15 0 chr2 26079694 26079955 -224607899 - AluSp SINE Alu -48 265 1 242 262 48 0 chr2 26079958 26080084 -224607770 - L1P LINE L1 -846 5300 5169 1482 141 109 62 chr2 26080203 26080479 -224607375 + AluJo SINE Alu 1 289 -23 332 324 33 52 chr2 26080507 26080837 -224607017 - L1M4 LINE L1 -1085 5061 4738 2124 127 3 3 chr2 26080838 26081138 -224606716 - AluJo SINE Alu -12 300 1 1958 226 94 8 chr2 26081494 26081984 -224605870 - MLT1F LTR MaLR -8 534 3 1711 256 106 16 chr2 26082132 26082820 -224605034 - L1MC4a LINE L1 -101 6020 5270 414 268 45 57 chr2 26082975 26083132 -224604722 - L1MC4 LINE L1 -143 7899 7745 659 225 62 77 chr2 26083171 26083221 -224604633 + MIR SINE MIR 20 69 -193 2111 99 7 3 chr2 26083221 26083554 -224604300 + AluSq SINE Alu 1 334 0 659 225 62 77 chr2 26083554 26083711 -224604143 + MIR SINE MIR 69 225 -37 24 0 0 0 chr2 26083973 26083997 -224603857 + AT_rich Low_complexity Low_complexity 1 24 0 2355 106 3 0 chr2 26084867 26085178 -224602676 + AluSx SINE Alu 1 312 0 354 240 29 19 chr2 26085195 26085316 -224602538 + MIR SINE MIR 33 154 -64 187 276 195 23 chr2 26085708 26085795 -224602059 + L2 LINE L2 3139 3240 -32 180 0 0 0 chr2 26086177 26086197 -224601657 + (TA)n Simple_repeat Simple_repeat 1 20 0 212 292 56 11 chr2 26086295 26086384 -224601470 - MIR3 SINE MIR -4 204 112 3159 138 0 24 chr2 26086587 26086760 -224601094 - HERVK22 LTR ERVK -6026 811 635 2519 84 0 0 chr2 26086760 26087069 -224600785 - AluY SINE Alu -2 309 1 3159 138 0 24 chr2 26087069 26087387 -224600467 - HERVK22 LTR ERVK -6202 635 332 1037 77 0 8 chr2 26087387 26087517 -224600337 + AluY SINE Alu 1 129 -182 585 162 29 0 chr2 26087617 26087722 -224600132 - AluJb SINE Alu -203 109 2 824 278 28 24 chr2 26087733 26088024 -224599830 + HAL1 LINE L1 2 293 -2214 879 253 106 76 chr2 26088050 26088740 -224599114 + MER49 LTR ERV1 15 923 0 1004 263 50 66 chr2 26088832 26089097 -224598757 + HAL1 LINE L1 435 695 -1812 2167 93 11 0 chr2 26089097 26089399 -224598455 + AluSx SINE Alu 3 307 0 1004 263 50 66 chr2 26089399 26089513 -224598341 + HAL1 LINE L1 695 809 -1698 1854 165 7 7 chr2 26089525 26089834 -224598020 - AluJo SINE Alu -3 309 1 1772 176 106 131 chr2 26090419 26090849 -224597005 + HAL1 LINE L1 805 1244 -1263 2374 91 0 0 chr2 26090849 26091175 -224596679 - AluSq SINE Alu 0 326 1 1772 176 106 131 chr2 26091175 26091415 -224596439 + HAL1 LINE L1 1244 1455 -1052 309 26 0 0 chr2 26091415 26091453 -224596401 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1772 176 106 131 chr2 26091453 26091612 -224596242 + HAL1 LINE L1 1455 1616 -891 1405 162 62 26 chr2 26091811 26092120 -224595734 - MER33 DNA MER1_type -4 320 1 1516 121 0 0 chr2 26092207 26092413 -224595441 + AluSc SINE Alu 88 293 -16 954 97 0 0 chr2 26092867 26093001 -224594853 + AluSp/q SINE Alu 179 312 -1 2518 55 0 16 chr2 26093375 26093685 -224594169 - AluY SINE Alu -6 305 1 1014 300 88 16 chr2 26093709 26094326 -224593528 - L1MC4a LINE L1 -1893 5915 5255 762 170 0 43 chr2 26094519 26094660 -224593194 - AluJo SINE Alu -176 136 2 276 30 0 0 chr2 26094719 26094752 -224593102 + (TTA)n Simple_repeat Simple_repeat 2 34 0 695 178 0 8 chr2 26094761 26094879 -224592975 - FLAM_C SINE Alu -25 118 2 2132 114 3 13 chr2 26096253 26096559 -224591295 + AluSx SINE Alu 1 303 -9 480 103 0 0 chr2 26096847 26096915 -224590939 - AluSc SINE Alu -8 301 234 1001 79 0 8 chr2 26096915 26097041 -224590813 - AluSc SINE Alu -184 125 1 1714 228 34 55 chr2 26097065 26097386 -224590468 - L1MC4a LINE L1 -1037 5109 4783 2748 119 41 2 chr2 26097386 26097797 -224590057 - MSTA LTR MaLR 0 428 2 1714 228 34 55 chr2 26097797 26097926 -224589928 - L1MC4a LINE L1 -1363 4783 4671 2088 145 7 0 chr2 26097926 26098230 -224589624 - AluSx SINE Alu -6 306 1 1714 228 34 55 chr2 26098230 26098343 -224589511 - L1MC4a LINE L1 -1475 4671 4557 438 250 17 0 chr2 26098389 26098509 -224589345 - L1MC4a LINE L1 -1792 4354 4233 842 229 79 12 chr2 26098658 26098900 -224588954 + MIR SINE MIR 3 262 0 29 0 0 0 chr2 26099753 26099782 -224588072 + AT_rich Low_complexity Low_complexity 1 29 0 503 269 98 57 chr2 26100012 26100181 -224587673 - Charlie8 DNA MER1_type -65 276 91 2351 91 0 3 chr2 26100181 26100479 -224587375 - AluSg SINE Alu -13 297 1 503 269 98 57 chr2 26100479 26100573 -224587281 - Charlie8 DNA MER1_type -250 91 2 251 335 92 10 chr2 26100573 26100779 -224587075 + L2 LINE L2 2535 2757 -557 1813 170 10 0 chr2 26100827 26101121 -224586733 - AluJb SINE Alu -15 297 1 617 214 312 0 chr2 26101470 26101624 -224586230 + Tigger5 DNA MER2_type 11 212 -2111 2249 116 0 0 chr2 26101624 26101917 -224585937 + AluSx SINE Alu 1 293 -19 1853 96 49 146 chr2 26101917 26102107 -224585747 - HERVK22 LTR ERVK -6489 348 212 4894 117 32 38 chr2 26102107 26102892 -224584962 - LTR17 LTR ERV1 0 780 1 1853 96 49 146 chr2 26102892 26103086 -224584768 - HERVK22 LTR ERVK -6625 212 1 3312 93 18 7 chr2 26103087 26103540 -224584314 - LTR22A LTR ERVK 0 458 1 2264 117 3 0 chr2 26103960 26104269 -224583585 - AluSx SINE Alu -2 310 1 188 329 0 0 chr2 26105308 26105381 -224582473 + L2 LINE L2 2284 2356 -958 2107 136 0 0 chr2 26105381 26105675 -224582179 + AluSx SINE Alu 1 294 -18 227 311 0 0 chr2 26106177 26106251 -224581603 + L1MC/D LINE L1 5812 5885 -1923 21 0 0 0 chr2 26106802 26106823 -224581031 + AT_rich Low_complexity Low_complexity 1 21 0 2424 95 3 0 chr2 26106905 26107209 -224580645 + AluSx SINE Alu 1 305 -7 345 215 20 114 chr2 26108052 26108154 -224579700 + L1MD3 LINE L1 5794 5879 -1929 2165 134 0 16 chr2 26108154 26108461 -224579393 + AluJb SINE Alu 1 302 -10 345 215 20 114 chr2 26108461 26108507 -224579347 + L1MD3 LINE L1 5879 5928 -1880 1782 154 74 0 chr2 26108616 26108901 -224578953 + AluSx SINE Alu 1 306 -6 2162 134 0 0 chr2 26109201 26109511 -224578343 + AluSx SINE Alu 1 310 0 1316 130 0 211 chr2 26109806 26110175 -224577679 + AluJo SINE Alu 1 291 -21 1953 128 34 7 chr2 26110485 26110782 -224577072 + AluSx SINE Alu 1 305 -7 3389 156 180 137 chr2 26111090 26111411 -224576443 + L1MD3 LINE L1 6736 7042 -953 2111 94 0 0 chr2 26111411 26111677 -224576177 + AluSx SINE Alu 35 300 -12 3389 156 180 137 chr2 26111677 26111754 -224576100 + L1MD3 LINE L1 7042 7114 -881 1706 173 10 23 chr2 26111754 26112061 -224575793 + AluJo SINE Alu 10 312 0 3389 156 180 137 chr2 26112061 26112192 -224575662 + L1MD3 LINE L1 7114 7238 -757 526 239 26 8 chr2 26112192 26112309 -224575545 + MLT1F1 LTR MaLR 1 119 -448 3389 156 180 137 chr2 26112309 26112752 -224575102 + L1MD3 LINE L1 7238 7660 -335 2404 90 0 7 chr2 26112752 26113053 -224574801 + AluSq SINE Alu 1 299 -14 3389 156 180 137 chr2 26113053 26113110 -224574744 + L1MD3 LINE L1 7660 7713 -282 1544 184 25 22 chr2 26113110 26113388 -224574466 - AluJo SINE Alu -33 279 1 3389 156 180 137 chr2 26113388 26113445 -224574409 + L1MD3 LINE L1 7713 7994 -1 27 29 0 0 chr2 26113481 26113515 -224574339 + AT_rich Low_complexity Low_complexity 1 34 0 2376 46 0 55 chr2 26114766 26115073 -224572781 - AluY SINE Alu -12 299 10 203 179 0 0 chr2 26115225 26115264 -224572590 + A-rich Low_complexity Low_complexity 1 39 0 1418 124 9 5 chr2 26115302 26115519 -224572335 + HERV15 LTR ERV1 3160 3377 -5358 21343 106 10 8 chr2 26115519 26118499 -224569355 + HERV15 LTR ERV1 3776 6762 -1973 8257 83 6 18 chr2 26118492 26119595 -224568259 + HERV15 LTR ERV1 6982 8071 -664 * 2791 115 8 0 chr2 26119575 26119965 -224567889 + HERV15 LTR ERV1 8343 8735 0 * 3090 122 25 21 chr2 26119965 26120450 -224567404 + LTR15 LTR ERV1 1 487 -6 270 324 0 0 chr2 26120454 26120556 -224567298 - L1MC/D LINE L1 -1939 5869 5768 1741 141 33 27 chr2 26120653 26120952 -224566902 - AluJb SINE Alu -11 301 1 2290 112 0 0 chr2 26121132 26121437 -224566417 - AluSx SINE Alu -5 307 3 2483 82 0 0 chr2 26121759 26122065 -224565789 + AluY SINE Alu 3 308 -3 45 45 0 0 chr2 26122449 26122515 -224565339 + AT_rich Low_complexity Low_complexity 1 66 0 473 329 0 22 chr2 26124524 26124661 -224563193 - MIR3 SINE MIR -64 144 11 1056 192 195 3 chr2 26129042 26129329 -224558525 - Charlie1b DNA MER1_type -181 342 1 363 322 7 20 chr2 26129409 26129555 -224558299 + GA-rich Low_complexity Low_complexity 1 144 0 766 163 8 0 chr2 26132357 26132480 -224555374 + FLAM_A SINE Alu 1 124 -9 804 160 23 6 chr2 26133559 26133734 -224554120 + CT-rich Low_complexity Low_complexity 2 179 0 825 180 0 76 chr2 26133761 26133933 -224553921 - FRAM SINE Alu -12 164 6 316 204 80 105 chr2 26134192 26134259 -224553595 + L1MC4a LINE L1 5312 5379 -2429 2231 118 3 0 chr2 26134259 26134564 -224553290 + AluSq SINE Alu 1 306 -7 316 204 80 105 chr2 26134564 26134658 -224553196 + L1MC4a LINE L1 5379 5469 -2339 397 293 89 19 chr2 26134684 26134954 -224552900 + L1MC4a LINE L1 5649 5937 -1871 2282 88 14 7 chr2 26135734 26136030 -224551824 + AluSx SINE Alu 1 298 -14 2301 99 3 16 chr2 26136043 26136357 -224551497 + AluSg SINE Alu 1 310 0 188 211 105 40 chr2 26136684 26136760 -224551094 + L2 LINE L2 3192 3272 0 2255 87 0 27 chr2 26136893 26137192 -224550662 + AluSx SINE Alu 1 291 -21 667 206 0 22 chr2 26137512 26137648 -224550206 - FLAM_A SINE Alu 0 133 1 2039 147 3 0 chr2 26137673 26137972 -224549882 - AluSx SINE Alu -12 300 1 1781 151 25 54 chr2 26138005 26138322 -224549532 + AluJb SINE Alu 3 310 -2 5216 66 38 0 chr2 26138384 26139065 -224548789 - L1PA13 LINE L1 -2 6161 5455 2111 129 10 0 chr2 26140816 26141111 -224546743 - AluSx SINE Alu -14 298 1 1016 160 20 60 chr2 26141543 26141743 -224546111 - MSTD LTR MaLR -1 395 204 189 121 0 0 chr2 26141761 26141794 -224546060 + (GA)n Simple_repeat Simple_repeat 1 33 0 367 142 28 123 chr2 26141832 26141938 -224545916 + MSTD LTR MaLR 299 394 -2 * 793 116 0 0 chr2 26141938 26142046 -224545808 - MSTD LTR MaLR -288 108 1 271 306 47 0 chr2 26142079 26142164 -224545690 + MIR3 SINE MIR 73 161 -47 2505 215 89 19 chr2 26142165 26142489 -224545365 - L1MDb LINE L1 -4676 1864 1564 2236 99 7 3 chr2 26142489 26142793 -224545061 - AluY SINE Alu -6 305 1 2505 215 89 19 chr2 26142793 26142943 -224544911 - L1MDb LINE L1 -4976 1564 1426 1932 232 8 37 chr2 26142943 26143189 -224544665 + MLT1D LTR MaLR 4 229 -276 1912 134 25 14 chr2 26143189 26143472 -224544382 - AluJb SINE Alu -24 288 3 1932 232 8 37 chr2 26143472 26143742 -224544112 + MLT1D LTR MaLR 229 505 0 2505 215 89 19 chr2 26143742 26144228 -224543626 - L1MDb LINE L1 -5114 1426 907 316 370 93 21 chr2 26144726 26145015 -224542839 - L1MDb LINE L1 -6200 340 31 860 227 56 7 chr2 26145028 26145314 -224542540 - L1MEc LINE L1 -3166 3049 2750 2165 108 20 0 chr2 26145314 26145610 -224542244 + AluSx SINE Alu 1 302 -10 827 210 19 0 chr2 26145625 26145787 -224542067 + FRAM SINE Alu 1 165 -1 375 277 65 48 chr2 26145834 26146144 -224541710 - L1MEc LINE L1 -4052 2344 2030 2005 149 0 0 chr2 26146499 26146787 -224541067 + AluJb SINE Alu 1 288 -24 846 143 0 0 chr2 26146822 26146948 -224540906 - FLAM_C SINE Alu -7 136 11 191 387 21 0 chr2 26147191 26147284 -224540570 + L2 LINE L2 240 334 -2980 489 271 75 8 chr2 26147467 26147600 -224540254 - MER21B LTR ERV1 -654 209 68 1935 101 61 22 chr2 26147873 26148150 -224539704 - AluSx SINE Alu -20 292 5 721 212 0 0 chr2 26148215 26148347 -224539507 + FLAM_A SINE Alu 1 132 -1 2884 151 99 16 chr2 26149100 26149705 -224538149 - L1MB7 LINE L1 -41 6143 5476 302 335 79 60 chr2 26150004 26150270 -224537584 - L2 LINE L2 -16 3256 2986 429 103 0 0 chr2 26150357 26150425 -224537429 + (TG)n Simple_repeat Simple_repeat 2 69 0 2282 117 10 0 chr2 26150485 26150794 -224537060 + AluSx SINE Alu 1 312 0 643 281 45 27 chr2 26151152 26151373 -224536481 + MLT1H LTR MaLR 2 226 -323 796 138 8 0 chr2 26151377 26151507 -224536347 - L1MA9 LINE L1 0 6312 6182 601 222 24 8 chr2 26151507 26151633 -224536221 + MLT1H LTR MaLR 416 543 -6 2129 122 0 3 chr2 26151782 26152104 -224535750 + AluSx SINE Alu 1 321 0 811 182 8 0 chr2 26152274 26152406 -224535448 + FLAM_A SINE Alu 1 133 0 201 147 0 0 chr2 26152742 26152776 -224535078 + (T)n Simple_repeat Simple_repeat 1 34 0 1628 135 11 22 chr2 26152919 26153193 -224534661 - AluJo SINE Alu -30 282 12 1437 137 17 99 chr2 26153229 26153282 -224534572 + MER58B DNA MER1_type 74 130 -2290 1675 180 41 3 chr2 26153282 26153598 -224534256 + L1MC1 LINE L1 6000 6327 -6 1437 137 17 99 chr2 26153598 26153836 -224534018 + MER58B DNA MER1_type 130 341 0 1237 270 65 7 chr2 26153889 26154280 -224533574 + HERV16 LTR ERVL 2777 3235 -1906 875 144 12 24 chr2 26154282 26154449 -224533405 - AluJo SINE Alu -147 165 1 22 0 0 0 chr2 26154546 26154568 -224533286 + GC_rich Low_complexity Low_complexity 1 22 0 217 196 54 0 chr2 26155089 26155145 -224532709 - L2 LINE L2 0 3313 3255 2099 118 3 7 chr2 26155340 26155628 -224532226 + AluSx SINE Alu 3 289 -23 250 250 139 9 chr2 26155700 26155808 -224532046 + MIR SINE MIR 23 144 -64 1266 146 105 34 chr2 26156359 26156654 -224531200 + LTR52 LTR ERVL 5 320 -101 1432 128 124 0 chr2 26156748 26156998 -224530856 + L1MA5A LINE L1 5997 6277 -20 2192 131 0 10 chr2 26156998 26157311 -224530543 - AluSx SINE Alu -2 310 1 23 33 0 0 chr2 26157316 26157346 -224530508 + AT_rich Low_complexity Low_complexity 1 30 0 313 336 9 0 chr2 26157688 26157795 -224530059 + L2 LINE L2 3201 3308 -5 232 268 62 18 chr2 26157805 26157917 -224529937 + L1ME4a LINE L1 5685 5801 -361 235 193 136 23 chr2 26158007 26158095 -224529759 + L1ME4a LINE L1 5944 6041 -80 2280 90 37 0 chr2 26158362 26158661 -224529193 + AluSg SINE Alu 1 310 0 346 212 106 35 chr2 26159414 26159527 -224528327 - MIR SINE MIR -42 220 100 2277 94 7 7 chr2 26159963 26160270 -224527584 - AluSg SINE Alu -3 307 1 212 253 13 27 chr2 26161499 26161577 -224526277 + (TA)n Simple_repeat Simple_repeat 1 76 0 1927 141 0 7 chr2 26162287 26162577 -224525277 - AluSx SINE Alu -4 308 21 23 68 0 0 chr2 26162755 26162799 -224525055 + AT_rich Low_complexity Low_complexity 1 44 0 282 219 73 110 chr2 26168866 26168984 -224518870 + L1ME LINE L1 5590 5702 -419 2065 146 0 16 chr2 26168984 26169299 -224518555 - AluJb SINE Alu -2 310 1 282 219 73 110 chr2 26169299 26169344 -224518510 + L1ME LINE L1 5702 5747 -374 273 343 76 0 chr2 26170564 26170669 -224517185 + L3 LINE CR1 1459 1571 -6 330 319 88 42 chr2 26171839 26172030 -224515824 - MIR SINE MIR -63 145 2 185 342 99 33 chr2 26172278 26172430 -224515424 + MIR3 SINE MIR 44 205 -3 2353 73 10 0 chr2 26172822 26173111 -224514743 - AluSg SINE Alu -18 292 1 645 321 55 9 chr2 26173577 26173795 -224514059 + MIR SINE MIR 2 229 -33 734 198 24 0 chr2 26173870 26173996 -224513858 - FLAM_A SINE Alu -3 130 2 355 252 84 23 chr2 26174517 26174648 -224513206 + MIR3 SINE MIR 68 206 -2 201 357 14 0 chr2 26174676 26174746 -224513108 + L2 LINE L2 2260 2330 -984 279 0 0 0 chr2 26175478 26175509 -224512345 + (A)n Simple_repeat Simple_repeat 1 31 0 2365 269 106 46 chr2 26175693 26176999 -224510855 + L1MC4a LINE L1 5255 6638 -1170 22 0 0 0 chr2 26177083 26177105 -224510749 + AT_rich Low_complexity Low_complexity 1 22 0 533 215 30 106 chr2 26177221 26177438 -224510416 + L1MC5 LINE L1 7304 7499 -462 1845 126 54 0 chr2 26177438 26177715 -224510139 - AluSq SINE Alu -21 292 1 533 215 30 106 chr2 26177715 26177762 -224510092 + L1MC5 LINE L1 7499 7548 -413 557 179 27 0 chr2 26177789 26177901 -224509953 + L1MC5 LINE L1 7680 7794 -167 354 298 21 28 chr2 26177930 26178071 -224509783 + L1ME LINE L1 41 180 -5890 304 302 33 61 chr2 26178108 26178320 -224509534 + L1ME LINE L1 258 463 -5607 1819 237 90 78 chr2 26178446 26179064 -224508790 + L1ME LINE L1 271 880 -5202 2064 133 0 7 chr2 26179064 26179358 -224508496 - AluJo SINE Alu -18 294 3 1819 237 90 78 chr2 26179358 26180052 -224507802 + L1ME LINE L1 880 1514 -4568 1783 145 64 14 chr2 26180586 26180883 -224506971 - AluJo SINE Alu 0 312 1 2358 86 3 7 chr2 26181838 26182141 -224505713 + AluSp SINE Alu 1 302 -11 355 246 78 21 chr2 26182515 26182657 -224505197 + L1MC5 LINE L1 7637 7786 -175 1302 138 6 0 chr2 26182657 26182838 -224505016 + AluSq SINE Alu 1 182 -131 25 0 0 0 chr2 26182942 26182967 -224504887 + AT_rich Low_complexity Low_complexity 1 25 0 1953 154 3 13 chr2 26183520 26183826 -224504028 + AluJo SINE Alu 3 305 -7 2206 101 10 10 chr2 26184295 26184603 -224503251 + AluSq SINE Alu 1 308 -5 5307 75 21 38 chr2 26184792 26185851 -224502003 + SVA Other Other 3 868 -592 6542 60 24 34 chr2 26185864 26186815 -224501039 + SVA Other Other 433 1374 -12 304 351 89 10 chr2 26187173 26187475 -224500379 - L2 LINE L2 -819 2495 2170 193 200 0 60 chr2 26187676 26187726 -224500128 + L2 LINE L2 3188 3234 -38 943 240 61 8 chr2 26187971 26188217 -224499637 - MER46C DNA MER2_type -10 328 70 594 245 51 38 chr2 26188636 26188877 -224498977 - L2 LINE L2 -34 3279 2944 1171 241 14 0 chr2 26189044 26189264 -224498590 - MER58A DNA MER1_type 0 224 2 362 333 32 0 chr2 26190048 26190141 -224497713 + MIR SINE MIR 19 114 -94 222 62 0 0 chr2 26190338 26190370 -224497484 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2338 105 3 0 chr2 26190584 26190889 -224496965 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr2 26191863 26191886 -224495968 + AT_rich Low_complexity Low_complexity 1 23 0 880 145 15 0 chr2 26192470 26192601 -224495253 + FLAM_A SINE Alu 1 133 0 1725 126 99 8 chr2 26192641 26192904 -224494950 + AluSx SINE Alu 1 287 -25 799 200 123 0 chr2 26193333 26193503 -224494351 + MIR SINE MIR 71 261 -1 2322 87 23 0 chr2 26193905 26194205 -224493649 - AluSx SINE Alu -5 307 1 1531 52 134 0 chr2 26194372 26194566 -224493288 + AluY SINE Alu 58 277 -34 2129 122 3 13 chr2 26194727 26195030 -224492824 + AluSx SINE Alu 1 300 -12 1121 153 144 4 chr2 26195123 26195349 -224492505 + MER44D DNA MER2_type 1 528 -81 670 164 138 0 chr2 26195349 26195465 -224492389 + MER2 DNA MER2_type 1 132 -213 2410 63 3 0 chr2 26195465 26195750 -224492104 - AluY SINE Alu -25 286 1 695 306 156 42 chr2 26196899 26197027 -224490827 - L3 LINE CR1 -140 1437 1325 2223 118 0 0 chr2 26197027 26197323 -224490531 - AluSx SINE Alu -16 296 1 695 306 156 42 chr2 26197323 26197465 -224490389 - L3 LINE CR1 -252 1325 1201 979 210 93 0 chr2 26197465 26197670 -224490184 - MER58A DNA MER1_type 0 224 1 695 306 156 42 chr2 26197670 26198111 -224489743 - L3 LINE CR1 -376 1201 644 613 133 0 51 chr2 26198161 26198259 -224489595 + AluJ/FLAM SINE Alu 3 95 -217 1972 96 62 7 chr2 26198268 26198559 -224489295 - AluSx SINE Alu -1 311 5 1932 137 40 28 chr2 26198561 26198883 -224488971 - THE1B LTR MaLR -38 326 1 820 261 70 21 chr2 26198979 26199263 -224488591 + MLT1C LTR MaLR 168 465 -2 285 299 84 9 chr2 26199282 26199389 -224488465 - L2 LINE L2 -208 3105 2991 849 191 111 36 chr2 26199447 26199672 -224488182 + L1ME3 LINE L1 5913 6154 -8 325 322 256 22 chr2 26199751 26200114 -224487740 - L2 LINE L2 -341 2973 2526 988 178 6 12 chr2 26200357 26200520 -224487334 + FRAM SINE Alu 1 158 -18 1733 170 3 7 chr2 26200643 26200937 -224486917 + AluJb SINE Alu 3 295 -17 574 204 154 43 chr2 26201537 26201699 -224486155 - MIR SINE MIR -13 249 70 2306 85 0 16 chr2 26201993 26202300 -224485554 + AluY SINE Alu 2 303 -8 1483 169 48 45 chr2 26202537 26202827 -224485027 - AluJo SINE Alu -19 293 3 2418 71 3 0 chr2 26203049 26203346 -224484508 + AluSq SINE Alu 1 298 -15 2225 83 27 7 chr2 26203351 26203652 -224484202 + AluSp SINE Alu 7 313 0 300 272 31 93 chr2 26203876 26204038 -224483816 - L2 LINE L2 -2 3311 3160 194 331 88 37 chr2 26204966 26205102 -224482752 + L3b LINE CR1 1302 1444 -139 287 232 0 0 chr2 26205258 26205314 -224482540 - L2 LINE L2 0 3272 3217 222 294 59 0 chr2 26205437 26205505 -224482349 - L2 LINE L2 -261 3052 2981 191 291 202 38 chr2 26205603 26205816 -224482038 - MIR SINE MIR -2 260 13 185 202 294 28 chr2 26207421 26207530 -224480324 - MIR SINE MIR -14 248 111 231 286 0 0 chr2 26207667 26207723 -224480131 - L2 LINE L2 -1 3312 3257 978 133 42 18 chr2 26207824 26207989 -224479865 - AluJb SINE Alu -29 283 115 2052 140 3 0 chr2 26208208 26208508 -224479346 + AluSx SINE Alu 1 301 -11 247 272 78 29 chr2 26208827 26208909 -224478945 + MIR3 SINE MIR 66 155 -53 2552 49 0 13 chr2 26208909 26209214 -224478640 + AluY SINE Alu 1 301 -10 247 272 78 29 chr2 26209214 26209234 -224478620 + MIR3 SINE MIR 155 173 -35 1597 154 60 0 chr2 26209411 26209678 -224478176 + Tigger3(Golem) DNA MER2_type 2 284 -2745 226 167 28 0 chr2 26209677 26209713 -224478141 + Tigger3(Golem) DNA MER2_type 3002 3038 0 * 24 0 0 0 chr2 26210079 26210103 -224477751 + AT_rich Low_complexity Low_complexity 1 24 0 2488 58 0 0 chr2 26210569 26210860 -224476994 - AluY SINE Alu -20 291 1 673 157 0 9 chr2 26210880 26210988 -224476866 + FLAM_C SINE Alu 27 133 -10 2192 108 3 0 chr2 26211260 26211555 -224476299 - AluSx SINE Alu -16 296 1 3554 128 39 7 chr2 26212544 26213115 -224474739 - LTR38B LTR ERV1 0 610 22 183 42 0 0 chr2 26213119 26213143 -224474711 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 573 143 0 22 chr2 26213145 26213236 -224474618 - FRAM SINE Alu -19 157 69 881 200 47 147 chr2 26213312 26213450 -224474404 - L1MC4 LINE L1 -881 6927 6777 339 221 0 12 chr2 26213450 26213536 -224474318 - L1MA10 LINE L1 -15 6319 6235 881 200 47 147 chr2 26213536 26213559 -224474295 - L1MC4 LINE L1 -1031 6777 6753 2228 114 0 10 chr2 26213559 26213867 -224473987 - AluSq SINE Alu -8 305 1 881 200 47 147 chr2 26213867 26214020 -224473834 - L1MC4 LINE L1 -1055 6753 6701 1837 161 3 20 chr2 26214020 26214325 -224473529 + AluSx SINE Alu 1 300 -12 881 200 47 147 chr2 26214325 26214476 -224473378 - L1MC4 LINE L1 -1107 6701 6536 182 33 67 0 chr2 26216093 26216123 -224471731 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 25 31 0 0 chr2 26217270 26217302 -224470552 + AT_rich Low_complexity Low_complexity 1 32 0 1970 148 10 0 chr2 26218453 26218750 -224469104 - AluJo SINE Alu -8 304 5 814 112 0 17 chr2 26220751 26220867 -224466987 + FLAM_C SINE Alu 26 139 -4 335 301 68 90 chr2 26221619 26221790 -224466064 - L2 LINE L2 -143 3129 2967 2394 68 13 13 chr2 26221790 26222101 -224465753 + AluSp SINE Alu 1 311 -2 335 301 68 90 chr2 26222101 26222251 -224465603 - L2 LINE L2 -305 2967 2815 198 286 36 0 chr2 26222256 26222312 -224465542 - L3 LINE CR1 -179 1398 1341 221 351 40 20 chr2 26222373 26222524 -224465330 - L3 LINE CR1 -330 1247 1094 2169 102 3 43 chr2 26223464 26223786 -224464068 - AluY SINE Alu -2 309 1 2430 82 0 0 chr2 26224462 26224767 -224463087 + AluY SINE Alu 1 305 -6 2230 112 0 13 chr2 26225683 26225986 -224461868 - AluSx SINE Alu -13 299 1 22 70 0 0 chr2 26226347 26226390 -224461464 + AT_rich Low_complexity Low_complexity 1 43 0 2095 141 6 10 chr2 26226944 26227257 -224460597 - AluSx SINE Alu 0 312 1 367 239 90 8 chr2 26227324 26227458 -224460396 - L1ME4a LINE L1 0 6121 5977 2279 100 0 10 chr2 26227715 26228025 -224459829 - AluSx SINE Alu -5 307 1 183 42 0 0 chr2 26228027 26228051 -224459803 + (T)n Simple_repeat Simple_repeat 1 24 0 2244 100 3 0 chr2 26228258 26228548 -224459306 + AluSx SINE Alu 1 291 -21 784 113 81 124 chr2 26229072 26229258 -224458596 - MER20 DNA MER1_type 0 219 42 1652 186 16 16 chr2 26229321 26229633 -224458221 + AluJb SINE Alu 1 312 0 2050 135 3 0 chr2 26229764 26230060 -224457794 + AluJb SINE Alu 2 298 -14 2426 68 10 0 chr2 26230305 26230612 -224457242 + AluY SINE Alu 1 310 -1 498 232 14 56 chr2 26230665 26230807 -224457047 + MIR SINE MIR 4 139 -123 321 208 0 0 chr2 26230942 26231019 -224456835 + (TA)n Simple_repeat Simple_repeat 2 78 0 422 283 151 0 chr2 26231026 26231192 -224456662 - MIR SINE MIR -71 191 1 2299 117 0 0 chr2 26231947 26232256 -224455598 - AluSx SINE Alu -3 309 1 1057 250 133 42 chr2 26232679 26232985 -224454869 + L1ME LINE L1 4974 5251 -919 2372 75 0 7 chr2 26232985 26233280 -224454574 + AluSg SINE Alu 1 293 -17 1057 250 133 42 chr2 26233280 26233516 -224454338 + L1ME LINE L1 5251 5464 -706 2080 65 69 0 chr2 26233516 26233791 -224454063 + AluY SINE Alu 1 294 -17 1057 250 133 42 chr2 26233791 26233937 -224453917 + L1ME LINE L1 5464 5723 -447 255 140 0 40 chr2 26234041 26234091 -224453763 + L1MD3 LINE L1 7063 7110 -885 446 152 33 43 chr2 26234098 26234190 -224453664 + MLT1F1 LTR MaLR 35 125 -442 2211 157 47 15 chr2 26234190 26234599 -224453255 + L1MD3 LINE L1 7404 7825 -170 1996 102 0 37 chr2 26234676 26234971 -224452883 - AluSx SINE Alu -28 284 1 1976 124 11 7 chr2 26235486 26235789 -224452065 + AluSq SINE Alu 1 304 0 2236 118 0 7 chr2 26236533 26236838 -224451016 + AluSx SINE Alu 1 303 -9 1016 150 7 0 chr2 26237593 26237746 -224450108 - MER7A DNA MER2_type -1 335 182 1994 136 16 19 chr2 26237748 26238070 -224449784 - MER1B DNA MER1_type 0 339 4 844 181 110 16 chr2 26238072 26238254 -224449600 - MER7A DNA MER2_type -149 197 1 193 354 0 0 chr2 26238264 26238312 -224449542 + L2 LINE L2 3210 3257 -15 2273 107 0 0 chr2 26238650 26238950 -224448904 + AluSq SINE Alu 6 305 -8 1900 55 0 0 chr2 26239409 26239629 -224448225 + AluY SINE Alu 79 298 -13 2193 125 0 0 chr2 26239873 26240178 -224447676 + AluSx SINE Alu 1 305 -7 405 271 59 27 chr2 26240896 26241177 -224446677 - L1ME3 LINE L1 -225 5939 5651 467 122 0 12 chr2 26241186 26241268 -224446586 + (TG)n Simple_repeat Simple_repeat 2 82 0 2119 112 21 0 chr2 26241274 26241561 -224446293 - AluSx SINE Alu -19 293 1 406 224 128 66 chr2 26242088 26242191 -224445663 + L1ME4a LINE L1 5797 5892 -229 1873 161 0 7 chr2 26242191 26242483 -224445371 + AluJb SINE Alu 1 290 -22 406 224 128 66 chr2 26242483 26242683 -224445171 + L1ME4a LINE L1 5892 6119 -2 1803 170 13 10 chr2 26242850 26243150 -224444704 - AluJo SINE Alu -11 301 1 599 222 89 22 chr2 26244187 26244367 -224443487 + MLT1D LTR MaLR 12 203 -302 207 318 45 0 chr2 26244683 26244749 -224443105 + MIR SINE MIR 38 106 -102 21 0 0 0 chr2 26244978 26244999 -224442855 + AT_rich Low_complexity Low_complexity 1 21 0 531 150 15 105 chr2 26245073 26245206 -224442648 - L2 LINE L2 -2 3311 3191 706 144 117 0 chr2 26245502 26245613 -224442241 - FLAM_A SINE Alu -6 127 4 1986 90 6 99 chr2 26246184 26246529 -224441325 + AluSq SINE Alu 1 313 0 1670 141 100 4 chr2 26246766 26247035 -224440819 - AluSx SINE Alu -17 295 1 536 186 219 11 chr2 26247413 26247596 -224440258 - MIR SINE MIR -10 252 32 2385 48 41 0 chr2 26247601 26247896 -224439958 - AluY SINE Alu -4 307 1 352 230 186 0 chr2 26247950 26248063 -224439791 - MIR3 SINE MIR -45 163 30 2226 91 14 11 chr2 26299415 26299700 -224388154 - AluSx SINE Alu -6 306 21 342 267 213 20 chr2 26299834 26300036 -224387818 - L1ME LINE L1 -390 5731 5491 2370 74 0 3 chr2 26301966 26302251 -224385603 - AluSx SINE Alu -28 284 1 228 266 138 21 chr2 26302570 26302664 -224385190 + L2 LINE L2 3168 3272 0 830 268 45 23 chr2 26302732 26303042 -224384812 + L1MC5 LINE L1 7603 7919 -42 557 252 60 7 chr2 26306131 26306282 -224381572 + MIR SINE MIR 4 162 -100 2041 127 6 29 chr2 26306359 26306673 -224381181 - AluSx SINE Alu -5 307 1 680 231 72 0 chr2 26306843 26307038 -224380816 - L1ME2 LINE L1 0 6164 5956 5098 187 90 128 chr2 26307141 26307282 -224380572 - L1ME2 LINE L1 -437 5727 5582 2277 112 0 13 chr2 26307282 26307596 -224380258 + AluY SINE Alu 1 310 -1 5098 187 90 128 chr2 26307596 26308461 -224379393 - L1ME2 LINE L1 -582 5582 4686 1424 146 29 0 chr2 26308461 26308701 -224379153 - Tigger2 DNA MER2_type -1 2717 2471 2461 92 0 0 chr2 26308705 26309008 -224378846 + AluSq SINE Alu 1 303 -10 5098 187 90 128 chr2 26309008 26310080 -224377774 - L1ME2 LINE L1 -1481 4683 3572 2366 95 0 16 chr2 26310080 26310385 -224377469 + AluSx SINE Alu 1 300 -12 5098 187 90 128 chr2 26310385 26310845 -224377009 - L1ME2 LINE L1 -2592 3572 3073 1748 147 19 13 chr2 26310845 26311087 -224376767 - L1MB7 LINE L1 -16 6168 5922 2002 152 36 0 chr2 26311087 26311423 -224376431 + MER7A DNA MER2_type 1 346 0 1748 147 19 13 chr2 26311423 26311493 -224376361 - L1MB7 LINE L1 -262 5922 5854 5098 187 90 128 chr2 26311493 26311823 -224376031 - L1ME2 LINE L1 -3091 3073 2732 2247 89 4 0 chr2 26314927 26315242 -224372612 + AluSq SINE Alu 4 319 0 395 267 14 69 chr2 26317411 26317611 -224370243 + MIR SINE MIR 21 203 -58 405 48 0 114 chr2 26317835 26318002 -224369852 + (CTGGGG)n Simple_repeat Simple_repeat 1 148 0 189 189 38 19 chr2 26318358 26318411 -224369443 - MIR SINE MIR -60 148 95 511 152 0 0 chr2 26319504 26319583 -224368271 - AluJ/FLAM SINE Alu -232 80 2 240 254 30 0 chr2 26319978 26320045 -224367809 - L3 LINE CR1 -1 1576 1508 347 310 4 66 chr2 26320262 26320504 -224367350 + L2 LINE L2 2817 3043 -229 2324 77 24 7 chr2 26320892 26321190 -224366664 - AluSg SINE Alu -7 303 1 1491 122 68 9 chr2 26322693 26322915 -224364939 - AluJb SINE Alu -17 295 61 408 215 0 0 chr2 26323021 26323128 -224364726 + (CCCA)n Simple_repeat Simple_repeat 4 110 0 262 336 16 0 chr2 26323146 26323271 -224364583 + (TCCA)n Simple_repeat Simple_repeat 2 128 0 243 289 57 99 chr2 26323757 26324246 -224363608 - L2 LINE L2 -47 3225 2725 315 329 100 7 chr2 26325095 26325235 -224362619 + MER117 DNA MER1_type 15 167 -30 268 387 45 10 chr2 26325331 26325530 -224362324 - MIR SINE MIR -50 212 7 546 246 0 0 chr2 26326031 26326633 -224361221 + (CA)n Simple_repeat Simple_repeat 1 602 0 2205 82 0 0 chr2 26327417 26327726 -224360128 - AluSg SINE Alu 0 309 1 2140 99 10 10 chr2 26327737 26328049 -224359805 - AluSx SINE Alu 0 312 1 2563 216 44 93 chr2 26328049 26328479 -224359375 + L1MC5 LINE L1 6291 6741 -1220 1613 147 49 3 chr2 26328479 26328764 -224359090 + AluJb SINE Alu 7 304 -8 2563 216 44 93 chr2 26328764 26328901 -224358953 + L1MC5 LINE L1 6741 6883 -1078 1975 113 0 3 chr2 26328901 26329209 -224358645 + AluSc SINE Alu 1 307 0 2563 216 44 93 chr2 26329209 26329763 -224358091 + L1MC5 LINE L1 6883 7376 -585 204 292 15 0 chr2 26329830 26329895 -224357959 + MIR3 SINE MIR 132 197 -11 231 146 0 0 chr2 26331133 26331174 -224356680 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 317 281 105 18 chr2 26332156 26332270 -224355584 - L2 LINE L2 -998 2316 2193 1184 207 77 65 chr2 26332560 26332913 -224354941 + MLT1A1 LTR MaLR 1 357 -8 257 226 0 0 chr2 26333701 26333754 -224354100 + GA-rich Low_complexity Low_complexity 3 55 0 665 280 20 4 chr2 26333799 26334004 -224353850 + L1MC4a LINE L1 5668 5797 -547 273 29 0 0 chr2 26334511 26334545 -224353309 + (CA)n Simple_repeat Simple_repeat 2 35 0 351 266 23 121 chr2 26334720 26334936 -224352918 + L1MC4 LINE L1 1872 6984 -1338 521 339 114 28 chr2 26335352 26335936 -224351918 - L2 LINE L2 0 3272 2640 400 242 19 12 chr2 26337147 26337308 -224350546 + (TG)n Simple_repeat Simple_repeat 1 162 0 299 326 11 11 chr2 26337310 26337399 -224350455 + (CGTG)n Simple_repeat Simple_repeat 3 91 0 216 258 31 0 chr2 26337408 26337505 -224350349 + (TG)n Simple_repeat Simple_repeat 1 100 0 274 138 17 35 chr2 26337559 26337617 -224350237 + MER4-int LTR ERV1 1111 1167 -5431 424 316 23 0 chr2 26337617 26337750 -224350104 + (TG)n Simple_repeat Simple_repeat 1 136 0 225 94 0 0 chr2 26338740 26338772 -224349082 + (GAA)n Simple_repeat Simple_repeat 3 34 0 422 311 160 9 chr2 26339077 26339296 -224348558 - L2 LINE L2 0 3272 3021 748 287 111 23 chr2 26339675 26340080 -224347774 - MLT1J LTR MaLR -21 429 8 2954 74 0 5 chr2 26340390 26340770 -224347084 - L1PA5 LINE L1 0 6154 5777 288 219 94 0 chr2 26341277 26341341 -224346513 - MIR3 SINE MIR -6 202 133 474 253 82 0 chr2 26341393 26341539 -224346315 + MER103 DNA DNA 8 165 -1 243 280 125 31 chr2 26341758 26341934 -224345920 - MIR3 SINE MIR -55 207 11 2233 111 0 0 chr2 26342820 26343126 -224344728 + AluSx SINE Alu 1 306 -6 412 296 9 0 chr2 26343144 26343252 -224344602 - MIR3 SINE MIR -22 186 78 471 183 96 26 chr2 26344037 26344152 -224343702 + MIR3 SINE MIR 11 133 -75 321 297 35 34 chr2 26344816 26344976 -224342878 - MIR SINE MIR -63 145 16 335 152 25 25 chr2 26345173 26345252 -224342602 + MIR3 SINE MIR 85 163 -45 282 238 9 29 chr2 26346272 26346377 -224341477 + (CA)n Simple_repeat Simple_repeat 2 104 0 466 239 71 0 chr2 26346685 26346798 -224341056 + MER45A DNA AcHobo 58 178 0 214 214 0 0 chr2 26348123 26348165 -224339689 + MIR SINE MIR 106 147 -115 409 303 119 41 chr2 26353481 26353894 -224333960 + L2 LINE L2 2524 2968 -346 249 230 35 58 chr2 26353984 26354071 -224333783 + L2 LINE L2 3186 3270 -2 231 329 0 0 chr2 26354366 26354445 -224333409 + CT-rich Low_complexity Low_complexity 1 79 0 1473 281 43 45 chr2 26354968 26355310 -224332544 - L1MC4a LINE L1 -747 5399 5622 1915 98 0 15 chr2 26355310 26355576 -224332278 + AluSx SINE Alu 38 299 -13 1473 281 43 45 chr2 26355576 26356093 -224331761 - L1MC4a LINE L1 -523 5623 5106 807 178 0 84 chr2 26356111 26356302 -224331552 - AluJb SINE Alu -1 311 137 2508 60 3 0 chr2 26356787 26357102 -224330752 + L1PA7 LINE L1 5838 6153 -1 501 248 0 0 chr2 26358877 26359106 -224328748 + (TGGA)n Simple_repeat Simple_repeat 1 229 0 460 331 199 9 chr2 26359132 26359458 -224328396 + L3 LINE CR1 1184 1571 -6 426 318 98 0 chr2 26360060 26360233 -224327621 + MIR SINE MIR 47 236 -26 318 295 95 0 chr2 26360601 26360706 -224327148 + MIR3 SINE MIR 93 207 -1 252 301 49 24 chr2 26360820 26360943 -224326911 + MIR SINE MIR 72 197 -65 467 300 29 53 chr2 26362124 26362294 -224325560 + MER91A DNA MER1_type 31 196 0 594 235 54 12 chr2 26362672 26362838 -224325016 + MIR SINE MIR 20 192 -70 279 351 97 12 chr2 26362847 26363012 -224324842 - MER104 DNA Tc2 -1 179 1 303 327 187 2 chr2 26363580 26364057 -224323797 - L2 LINE L2 -1037 2277 1713 997 143 122 15 chr2 26364808 26365004 -224322850 + MER20 DNA MER1_type 2 218 -1 205 371 60 18 chr2 26365351 26365518 -224322336 - L2 LINE L2 -107 3165 2992 459 288 49 18 chr2 26366737 26366900 -224320954 + MIR3 SINE MIR 23 190 -18 288 294 89 41 chr2 26367806 26367952 -224319902 + MIR3 SINE MIR 18 170 -38 373 181 39 102 chr2 26367991 26368074 -224319780 + MER5B DNA MER1_type 39 113 -65 1980 127 7 3 chr2 26368074 26368366 -224319488 - AluSx SINE Alu -17 295 3 373 181 39 102 chr2 26368366 26368409 -224319445 + MER5B DNA MER1_type 113 157 -21 228 208 21 0 chr2 26368777 26368825 -224319029 - L2 LINE L2 -1 3271 3223 2001 119 0 20 chr2 26368880 26369182 -224318672 - AluSx SINE Alu -16 296 1 201 39 0 0 chr2 26369218 26369244 -224318610 + (GA)n Simple_repeat Simple_repeat 2 27 0 222 285 174 35 chr2 26369391 26369535 -224318319 + MIR SINE MIR 47 210 -52 2150 96 20 0 chr2 26369733 26370036 -224317818 - AluSg SINE Alu 0 310 2 290 350 36 21 chr2 26371513 26371707 -224316147 - L2 LINE L2 -581 2733 2537 1078 150 0 0 chr2 26372140 26372307 -224315547 - AluSg/x SINE Alu -2 310 144 400 257 88 47 chr2 26372428 26372599 -224315255 + MIR SINE MIR 72 249 -13 279 209 70 43 chr2 26373462 26373577 -224314277 - L1ME4a LINE L1 0 6121 6004 252 327 77 12 chr2 26374109 26374277 -224313577 + L3 LINE CR1 1190 1368 -209 334 304 105 29 chr2 26374992 26375163 -224312691 - MIR SINE MIR -3 259 76 351 44 0 0 chr2 26377659 26377704 -224310150 + (CA)n Simple_repeat Simple_repeat 2 46 0 418 291 64 22 chr2 26377755 26377958 -224309896 - MIR SINE MIR -56 206 3 2123 96 34 0 chr2 26378964 26379257 -224308597 + AluSx SINE Alu 1 303 -9 409 347 94 36 chr2 26380880 26381157 -224306697 - L3b LINE CR1 -154 1429 1137 216 268 52 62 chr2 26381215 26381312 -224306542 - L2 LINE L2 -458 2856 2761 236 277 119 20 chr2 26381554 26381655 -224306199 + L2 LINE L2 2906 3016 -256 226 289 12 54 chr2 26381931 26382092 -224305762 + MIR SINE MIR 91 241 -21 225 359 86 0 chr2 26385051 26385168 -224302686 - MIR SINE MIR -10 252 126 243 262 128 74 chr2 26386872 26387021 -224300833 - MIR3 SINE MIR -14 194 38 332 268 116 9 chr2 26387387 26387499 -224300355 - MIR SINE MIR -110 152 29 192 77 0 0 chr2 26387649 26387675 -224300179 + (TG)n Simple_repeat Simple_repeat 1 26 0 216 220 80 0 chr2 26388988 26389038 -224298816 - MIR SINE MIR -62 146 93 490 297 195 5 chr2 26389648 26389843 -224298011 - MIR SINE MIR -11 251 20 182 286 80 114 chr2 26389905 26390080 -224297774 + MIR3 SINE MIR 33 201 -7 447 248 252 9 chr2 26390463 26390673 -224297181 - MIR SINE MIR 0 262 2 537 289 49 36 chr2 26391898 26392123 -224295731 + MIR SINE MIR 15 242 -20 187 300 146 9 chr2 26392157 26392267 -224295587 + L2 LINE L2 3147 3271 -1 325 239 150 9 chr2 26392466 26392579 -224295275 - MIR3 SINE MIR -19 189 61 402 134 15 0 chr2 26393098 26393165 -224294689 - MER5A DNA MER1_type 0 189 122 506 250 86 8 chr2 26393177 26393305 -224294549 + MER63 DNA MER1_type 3 766 -296 599 153 42 0 chr2 26393335 26393453 -224294401 - MER5A DNA MER1_type -66 123 1 186 279 70 0 chr2 26393840 26393926 -224293928 - L3 LINE CR1 -49 1528 1437 355 231 67 10 chr2 26395039 26395143 -224292711 + MIR SINE MIR 20 129 -79 234 238 48 16 chr2 26396024 26396087 -224291767 - L2 LINE L2 0 3313 3249 1865 164 0 3 chr2 26396566 26396871 -224290983 + AluSx SINE Alu 1 304 -8 348 338 86 0 chr2 26397105 26397256 -224290598 + MIR3 SINE MIR 36 199 -9 359 280 175 7 chr2 26397616 26397759 -224290095 - L3 LINE CR1 -1 1576 1410 336 260 0 39 chr2 26397882 26397986 -224289868 + L2 LINE L2 3170 3269 -3 712 164 6 22 chr2 26398004 26398145 -224289709 + (TGGA)n Simple_repeat Simple_repeat 1 140 -40 2173 119 0 0 chr2 26398145 26398457 -224289397 + AluSx SINE Alu 1 312 0 712 164 6 22 chr2 26398457 26398498 -224289356 + (TGGA)n Simple_repeat Simple_repeat 140 180 0 446 153 0 10 chr2 26398530 26398628 -224289226 + (TGGA)n Simple_repeat Simple_repeat 1 97 0 219 343 37 9 chr2 26398770 26398878 -224288976 - L3 LINE CR1 -606 971 861 687 205 0 0 chr2 26398891 26399008 -224288846 - FLAM_A SINE Alu -15 127 11 375 254 153 25 chr2 26399153 26399271 -224288583 + L2 LINE L2 3181 3313 0 473 265 80 13 chr2 26399278 26399429 -224288425 - MIR SINE MIR -67 195 35 293 345 120 7 chr2 26400103 26400245 -224287609 - MIR SINE MIR -70 192 35 256 369 56 12 chr2 26401390 26401550 -224286304 - MIR SINE MIR 0 262 96 224 140 40 0 chr2 26402734 26402784 -224285070 + (TCTCTG)n Simple_repeat Simple_repeat 4 55 0 397 271 68 8 chr2 26402788 26402906 -224284948 + MER5B DNA MER1_type 1 125 -53 434 271 206 32 chr2 26403327 26403482 -224284372 + MIR SINE MIR 24 205 -57 2078 131 3 0 chr2 26403843 26404149 -224283705 + AluSx SINE Alu 1 307 -5 328 274 104 0 chr2 26404255 26404361 -224283493 - MIR SINE MIR -63 145 29 281 224 0 45 chr2 26404496 26404563 -224283291 - L2 LINE L2 -14 3258 3195 2178 151 0 20 chr2 26405004 26405348 -224282506 + MER1B DNA MER1_type 1 337 0 260 82 0 41 chr2 26405450 26405499 -224282355 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 368 192 26 13 chr2 26405558 26405636 -224282218 + MIR3 SINE MIR 91 169 -39 224 247 247 10 chr2 26405817 26405914 -224281940 - L2 LINE L2 0 3272 3153 209 247 65 13 chr2 26406028 26406105 -224281749 + L2 LINE L2 3122 3202 -70 186 234 31 47 chr2 26406192 26406256 -224281598 + MIR SINE MIR 187 249 -13 208 333 10 62 chr2 26406685 26406781 -224281073 - MIR SINE MIR -66 196 106 232 253 48 12 chr2 26407281 26407364 -224280490 + MIR SINE MIR 45 130 -132 372 224 82 10 chr2 26407468 26407566 -224280288 - MER20B DNA MER1_type -622 161 57 218 302 34 54 chr2 26410676 26410825 -224277029 - L2 LINE L2 -1 3271 3126 1975 77 8 0 chr2 26410849 26411108 -224276746 - AluSx SINE Alu -14 298 38 2059 119 7 0 chr2 26411208 26411503 -224276351 - AluSx SINE Alu -15 297 1 491 234 32 8 chr2 26411535 26411659 -224276195 - Charlie4 DNA MER1_type -1678 283 157 487 296 0 22 chr2 26412264 26412399 -224275455 + MIR3 SINE MIR 30 161 -47 215 244 0 0 chr2 26412579 26412624 -224275230 + MIR3 SINE MIR 157 201 -7 1100 116 11 28 chr2 26414417 26414598 -224273256 + AluSg/x SINE Alu 117 294 -18 725 126 0 10 chr2 26414598 26414701 -224273153 - AluJo/FLAM SINE Alu -194 118 17 205 333 0 13 chr2 26414899 26414974 -224272880 - MIR SINE MIR -86 122 49 518 302 36 40 chr2 26415305 26415340 -224272514 - L1MC4a LINE L1 -1879 5929 5895 1765 174 0 19 chr2 26415340 26415650 -224272204 - AluJo SINE Alu -8 304 1 518 302 36 40 chr2 26415650 26415836 -224272018 - L1MC4a LINE L1 -1913 5895 5709 439 249 90 26 chr2 26416012 26416201 -224271653 - L1MC4a LINE L1 -2184 5624 5424 1095 195 27 14 chr2 26416210 26416431 -224271423 - AluJb SINE Alu -88 224 1 836 206 38 0 chr2 26416436 26416620 -224271234 - AluJo SINE Alu -1 311 121 261 305 45 32 chr2 26416620 26416743 -224271111 - L1MC4a LINE L1 -2397 5411 5284 2176 129 2 104 chr2 26416743 26417106 -224270748 - L1MB8 LINE L1 0 6178 5864 1529 167 29 4 chr2 26417106 26417413 -224270441 + AluSx SINE Alu 1 314 0 2176 129 2 104 chr2 26417413 26417490 -224270364 - L1MB8 LINE L1 -314 5864 5781 261 305 45 32 chr2 26417490 26417520 -224270334 - L1MC4a LINE L1 -2524 5284 5256 247 288 11 79 chr2 26417651 26417777 -224270077 - L1P LINE L1 -1074 5072 4960 2125 95 3 30 chr2 26417777 26418082 -224269772 - AluSx SINE Alu -15 297 1 247 288 11 79 chr2 26418082 26418132 -224269722 - L1P LINE L1 -1186 4960 4908 243 249 43 155 chr2 26418293 26418375 -224269479 - L1MC5 LINE L1 -48 7913 7823 2189 113 3 0 chr2 26418375 26418684 -224269170 + AluSx SINE Alu 1 310 -2 243 249 43 155 chr2 26418684 26418755 -224269099 - L1MC5 LINE L1 -138 7823 7746 6412 112 6 44 chr2 26418755 26419762 -224268092 + LTR5 LTR ERVK 1 969 0 243 249 43 155 chr2 26419762 26419786 -224268068 - L1MC5 LINE L1 -215 7746 7721 1574 162 3 55 chr2 26419786 26420113 -224267741 - AluJb SINE Alu -2 310 1 243 249 43 155 chr2 26420113 26420210 -224267644 - L1MC5 LINE L1 -240 7721 7668 2224 181 116 13 chr2 26420212 26420670 -224267184 + MLT1D LTR MaLR 1 505 0 1901 118 42 7 chr2 26420738 26421026 -224266828 - AluJb SINE Alu -14 298 1 295 252 68 0 chr2 26421175 26421278 -224266576 + MIR3 SINE MIR 62 171 -37 797 169 0 0 chr2 26421394 26421512 -224266342 + FLAM_C SINE Alu 1 118 -15 26 50 0 0 chr2 26421512 26421552 -224266302 + AT_rich Low_complexity Low_complexity 1 40 0 607 207 45 34 chr2 26421778 26421861 -224265993 + MER53 DNA DNA 2 83 -106 3226 113 20 73 chr2 26421861 26422012 -224265842 - LTR26B LTR ERV1 -1 530 372 1647 155 33 7 chr2 26422012 26422315 -224265539 - AluJo SINE Alu -1 311 1 3226 113 20 73 chr2 26422315 26422535 -224265319 - LTR26B LTR ERV1 -159 372 196 1652 152 33 7 chr2 26422535 26422811 -224265043 - AluJb SINE Alu -9 303 21 3226 113 20 73 chr2 26422811 26422998 -224264856 - LTR26B LTR ERV1 -335 196 1 607 207 45 34 chr2 26422998 26423093 -224264761 + MER53 DNA DNA 83 182 -7 2021 142 0 0 chr2 26423165 26423460 -224264394 + AluSx SINE Alu 1 295 -17 1843 124 34 24 chr2 26423552 26423850 -224264004 + AluSx SINE Alu 12 312 0 252 289 59 19 chr2 26424687 26424794 -224263060 - MIR SINE MIR -65 143 51 2273 75 20 0 chr2 26425059 26425351 -224262503 + AluSx SINE Alu 3 300 -12 1857 100 100 14 chr2 26425709 26425939 -224261915 + LTR24C LTR ERV1 1 276 -359 2207 99 3 3 chr2 26425939 26426233 -224261621 - AluSx SINE Alu -18 294 1 1857 100 100 14 chr2 26426233 26426373 -224261481 + LTR24C LTR ERV1 276 403 -232 2921 158 73 8 chr2 26426516 26427035 -224260819 - MER41A LTR ERV1 0 554 2 214 264 92 0 chr2 26427232 26427319 -224260535 + L2 LINE L2 2939 3033 -239 214 316 94 8 chr2 26427539 26427656 -224260198 + L2 LINE L2 3182 3308 -5 263 114 0 2 chr2 26428073 26428309 -224259545 + AluSx SINE Alu 1 294 -8 252 293 57 57 chr2 26428404 26428544 -224259310 + L2 LINE L2 2910 3049 -223 1526 177 30 7 chr2 26428709 26428980 -224258874 - AluJo SINE Alu -29 283 7 2020 135 0 7 chr2 26429020 26429316 -224258538 + AluSx SINE Alu 3 296 -16 2117 148 45 5 chr2 26429323 26429742 -224258112 - LTR56 LTR ERV1 -2 443 8 4310 113 29 0 chr2 26429807 26430424 -224257430 + MER41B LTR ERV1 1 635 0 2011 102 7 7 chr2 26430535 26430818 -224257036 - AluSp SINE Alu -30 283 1 1709 197 3 3 chr2 26430818 26431118 -224256736 - AluSx SINE Alu -12 300 1 1916 80 9 49 chr2 26431148 26431427 -224256427 + MER4E LTR ERV1 1 267 -512 2074 83 31 14 chr2 26431427 26431717 -224256137 + AluSg SINE Alu 1 295 -15 1916 80 9 49 chr2 26431717 26431763 -224256091 + MER4E LTR ERV1 267 313 -466 1415 70 74 0 chr2 26431774 26431989 -224255865 + MER4E LTR ERV1 536 766 0 299 345 43 22 chr2 26432078 26432217 -224255637 + MIR3 SINE MIR 2 143 -65 2268 97 0 3 chr2 26432520 26432831 -224255023 + AluSx SINE Alu 1 310 -2 229 243 129 0 chr2 26433956 26434026 -224253828 - L2 LINE L2 -842 2472 2394 281 54 0 0 chr2 26434216 26434253 -224253601 - AluSp/q SINE Alu -35 268 232 202 320 57 66 chr2 26434253 26434375 -224253479 - L2 LINE L2 -37 3235 3115 2146 120 3 0 chr2 26435044 26435345 -224252509 + AluSx SINE Alu 1 302 -10 734 289 44 18 chr2 26435427 26435652 -224252202 - MIR SINE MIR -20 242 12 329 302 134 13 chr2 26435696 26435845 -224252009 - MIR3 SINE MIR -21 187 21 755 137 32 8 chr2 26436455 26436579 -224251275 + FLAM_C SINE Alu 1 127 -16 21 0 0 0 chr2 26436579 26436600 -224251254 + AT_rich Low_complexity Low_complexity 1 21 0 324 221 117 0 chr2 26436978 26437055 -224250799 + MIR3 SINE MIR 93 178 -30 2076 98 27 10 chr2 26437086 26437383 -224250471 - AluY SINE Alu -9 302 1 1755 150 49 0 chr2 26437383 26437669 -224250185 - AluJo SINE Alu -12 300 1 1849 170 0 7 chr2 26438849 26439155 -224248699 + AluJb SINE Alu 1 304 -8 2036 153 0 0 chr2 26439162 26439470 -224248384 + AluSx SINE Alu 1 308 -4 27 0 0 0 chr2 26440043 26440070 -224247784 + AT_rich Low_complexity Low_complexity 1 27 0 887 146 0 0 chr2 26440416 26440546 -224247308 + FLAM_A SINE Alu 4 133 0 438 346 257 10 chr2 26441100 26441493 -224246361 + L3 LINE CR1 803 1292 -285 300 381 19 12 chr2 26441567 26441727 -224246127 + MER117 DNA MER1_type 33 193 -4 738 182 6 50 chr2 26441835 26441945 -224245909 - Charlie4 DNA MER1_type 0 1961 1861 2228 76 10 10 chr2 26441945 26442248 -224245606 + AluY SINE Alu 1 303 -8 738 182 6 50 chr2 26442248 26442318 -224245536 - Charlie4 DNA MER1_type -100 1861 1789 337 281 8 11 chr2 26443085 26443213 -224244641 - MIR SINE MIR -79 183 17 502 318 112 33 chr2 26444713 26445134 -224242720 + L2 LINE L2 2819 3272 0 261 98 0 0 chr2 26445995 26446036 -224241818 + (TG)n Simple_repeat Simple_repeat 1 41 0 2190 122 0 0 chr2 26447776 26448079 -224239775 - AluSx SINE Alu -9 303 1 276 149 0 0 chr2 26449184 26449231 -224238623 + (CACG)n Simple_repeat Simple_repeat 4 50 0 213 299 23 69 chr2 26451200 26451287 -224236567 - L2 LINE L2 -1 3271 3189 410 279 95 0 chr2 26451983 26452141 -224235713 - MIR3 SINE MIR -3 205 33 229 154 0 0 chr2 26452165 26452204 -224235650 - L2 LINE L2 -24 3248 3210 498 108 0 0 chr2 26452216 26452290 -224235564 + (TTCTCC)n Simple_repeat Simple_repeat 6 79 0 2195 95 7 3 chr2 26452295 26452589 -224235265 - AluSx SINE Alu -17 295 1 570 244 131 0 chr2 26452778 26452946 -224234908 + MIR SINE MIR 19 208 -54 1703 244 32 30 chr2 26453627 26453922 -224233932 + MER63B DNA MER1_type 1 299 -763 1792 156 50 0 chr2 26453922 26454204 -224233650 - AluJo SINE Alu -16 296 1 1703 244 32 30 chr2 26454204 26454343 -224233511 + MER63B DNA MER1_type 299 436 0 2399 122 27 11 chr2 26454353 26454722 -224233132 + THE1C LTR MaLR 1 375 0 510 268 35 0 chr2 26454951 26455093 -224232761 - MER5B DNA MER1_type -25 153 7 2126 107 43 0 chr2 26455945 26456244 -224231610 + AluSx SINE Alu 1 312 0 211 296 0 0 chr2 26457599 26457643 -224230211 - L2 LINE L2 -6 3266 3223 197 318 139 0 chr2 26457753 26457882 -224229972 - L2 LINE L2 -212 3060 2914 231 313 16 0 chr2 26458731 26458795 -224229059 + L2 LINE L2 3201 3265 -7 387 265 5 0 chr2 26458810 26458930 -224228924 - HAL1b LINE L1 -44 6077 1194 312 48 0 0 chr2 26458930 26458972 -224228882 - 5S rRNA rRNA -79 42 1 1906 275 37 36 chr2 26459027 26459758 -224228096 - HAL1b LINE L1 -170 1178 447 486 328 238 12 chr2 26461561 26462146 -224225708 - L2 LINE L2 -784 2530 1814 189 303 172 20 chr2 26462556 26462655 -224225199 - MIR3 SINE MIR -2 206 93 798 160 0 15 chr2 26462885 26463016 -224224838 - FLAM_C SINE Alu -10 133 5 185 337 47 12 chr2 26464452 26464538 -224223316 - MIR SINE MIR -66 196 108 189 362 0 29 chr2 26465682 26465787 -224222067 - MIR SINE MIR -64 144 43 263 333 14 16 chr2 26466106 26466319 -224221535 - MIR SINE MIR -7 255 1 650 298 17 6 chr2 26467098 26467279 -224220575 - MIR SINE MIR -71 191 9 203 360 72 14 chr2 26468803 26468942 -224218912 + L3 LINE CR1 1164 1310 -267 452 273 197 10 chr2 26471284 26471482 -224216372 - MIR SINE MIR 0 262 28 324 241 36 45 chr2 26471558 26471670 -224216184 + MIR3 SINE MIR 3 113 -95 239 174 58 93 chr2 26472742 26472828 -224215026 - MIR SINE MIR 0 262 180 1028 265 155 28 chr2 26472871 26473826 -224214028 + L2 LINE L2 2169 3311 -2 298 250 33 43 chr2 26473828 26473920 -224213934 - MIR SINE MIR -158 104 14 636 251 18 0 chr2 26473937 26474100 -224213754 + MLT1J LTR MaLR 54 219 -292 2406 52 3 0 chr2 26474237 26474528 -224213326 + AluY SINE Alu 17 308 -3 449 236 79 89 chr2 26474603 26474806 -224213048 + MIR SINE MIR 58 258 -4 195 219 219 14 chr2 26475061 26475134 -224212720 - MIR SINE MIR -63 145 58 1400 44 0 6 chr2 26476168 26476349 -224211505 + (TTC)n Simple_repeat Simple_repeat 1 180 0 675 195 12 6 chr2 26476350 26476519 -224211335 + CT-rich Low_complexity Low_complexity 1 170 0 2203 128 3 0 chr2 26476513 26476817 -224211037 - AluSq SINE Alu -14 299 1 695 296 12 83 chr2 26476833 26477256 -224210598 + MLT1J LTR MaLR 26 418 -93 389 256 21 89 chr2 26477333 26477524 -224210330 + MER5B DNA MER1_type 1 178 0 401 247 21 0 chr2 26477578 26477671 -224210183 - MER5A DNA MER1_type -80 109 15 2108 222 69 27 chr2 26478751 26479315 -224208539 + MLT1E LTR MaLR 3 590 -3 1094 227 23 15 chr2 26479659 26480081 -224207773 - L1ME LINE L1 -4904 2053 1534 1600 210 59 2 chr2 26480083 26480494 -224207360 + MLT2B1 LTR ERVL 1 480 -40 255 61 0 0 chr2 26480503 26480536 -224207318 + (TG)n Simple_repeat Simple_repeat 2 34 0 354 343 0 9 chr2 26480536 26480644 -224207210 - L1MC4 LINE L1 -1341 6701 6595 348 138 0 12 chr2 26480647 26480719 -224207135 + MLT2B1 LTR ERVL 386 520 0 1673 248 84 64 chr2 26480720 26481459 -224206395 - L1ME LINE L1 -5310 1637 884 183 80 0 0 chr2 26481529 26481554 -224206300 - MIR SINE MIR -67 141 117 493 185 74 9 chr2 26481903 26482011 -224205843 - MIR3 SINE MIR -5 203 89 599 224 75 17 chr2 26482712 26482886 -224204968 + Charlie7 DNA MER1_type 385 568 -2044 180 0 0 0 chr2 26483092 26483112 -224204742 + (CA)n Simple_repeat Simple_repeat 1 20 0 4298 232 114 19 chr2 26483201 26483644 -224204210 + Charlie7 DNA MER1_type 998 1397 -1215 2326 92 0 10 chr2 26483644 26483949 -224203905 + AluSq SINE Alu 1 302 -11 4298 232 114 19 chr2 26483949 26484960 -224202894 + Charlie7 DNA MER1_type 1397 2591 -21 297 250 158 0 chr2 26484960 26485080 -224202774 - MIR3 SINE MIR -51 157 19 2194 116 0 13 chr2 26485199 26485509 -224202345 + AluSx SINE Alu 1 306 -6 2411 96 0 0 chr2 26486973 26487266 -224200588 + AluSc SINE Alu 1 293 -16 2161 103 7 3 chr2 26487302 26487619 -224200235 + AluSx SINE Alu 2 319 0 787 257 49 13 chr2 26487900 26488126 -224199728 + L1MC3 LINE L1 4509 4742 -1404 1134 186 51 5 chr2 26488126 26488341 -224199513 + AluJo SINE Alu 1 225 -87 270 0 0 0 chr2 26488403 26488433 -224199421 + (TA)n Simple_repeat Simple_repeat 2 31 0 1404 239 31 18 chr2 26488448 26488899 -224198955 + L1MC3 LINE L1 4755 5211 -935 * 2170 234 80 67 chr2 26488898 26489812 -224198042 + L1MC3 LINE L1 5735 6660 -1125 1810 189 39 61 chr2 26489817 26489943 -224197911 + L1MD3 LINE L1 7416 7543 -452 1513 170 51 4 chr2 26489943 26490219 -224197635 + AluJo SINE Alu 1 289 -23 1810 189 39 61 chr2 26490219 26490553 -224197301 + L1MD3 LINE L1 7543 7866 -129 250 203 0 34 chr2 26490580 26490639 -224197215 - L1MD3 LINE L1 -53 7942 7886 625 260 13 4 chr2 26490664 26490891 -224196963 + L1MEc LINE L1 660 888 -5508 1907 158 0 17 chr2 26490892 26491190 -224196664 + AluJb SINE Alu 15 307 -5 885 314 27 36 chr2 26491193 26491260 -224196594 + L1MEc LINE L1 1388 1454 -4942 2142 148 0 0 chr2 26491260 26491571 -224196283 + AluJo SINE Alu 1 311 -1 885 314 27 36 chr2 26491571 26491978 -224195876 + L1MEc LINE L1 1454 1858 -4538 * 1237 239 59 20 chr2 26491972 26492454 -224195400 + L1MEc LINE L1 2586 3114 -3101 378 241 45 9 chr2 26494704 26494816 -224193038 + MIR SINE MIR 111 226 -36 2316 102 0 10 chr2 26495117 26495420 -224192434 + AluSx SINE Alu 1 300 -12 247 403 0 15 chr2 26495530 26495664 -224192190 + MER5B DNA MER1_type 13 144 -34 416 372 76 14 chr2 26497847 26498070 -224189784 - MIR SINE MIR -6 256 20 462 300 67 22 chr2 26498424 26498604 -224189250 + L3 LINE CR1 439 626 -951 596 280 98 44 chr2 26498793 26499068 -224188786 + L1ME4a LINE L1 5645 5934 -187 286 310 171 12 chr2 26500307 26500565 -224187289 - L3 LINE CR1 -100 1477 1179 292 271 9 65 chr2 26500702 26500809 -224187045 - MIR SINE MIR -44 218 118 202 318 34 0 chr2 26501736 26501824 -224186030 + MIR SINE MIR 56 146 -62 224 330 57 0 chr2 26501922 26502010 -224185844 - MIR SINE MIR -77 185 93 290 292 21 52 chr2 26502189 26502333 -224185521 + MIR SINE MIR 16 156 -62 344 340 27 27 chr2 26502626 26502776 -224185078 - MIR3 SINE MIR -43 165 16 195 314 49 0 chr2 26502788 26502890 -224184964 - MIR SINE MIR -96 166 60 302 315 30 36 chr2 26503198 26503363 -224184491 + MIR SINE MIR 67 230 -32 207 169 108 62 chr2 26504207 26504272 -224183582 - MIR SINE MIR -63 145 78 252 0 0 0 chr2 26504281 26504309 -224183545 + (TG)n Simple_repeat Simple_repeat 1 28 0 494 266 36 7 chr2 26504570 26504709 -224183145 + MIR SINE MIR 79 221 -41 292 340 0 42 chr2 26505055 26505199 -224182655 + MIR3 SINE MIR 3 140 -68 1848 155 3 48 chr2 26505451 26505760 -224182094 - AluJb SINE Alu -17 295 1 577 308 37 27 chr2 26506655 26506954 -224180900 + HAL1 LINE L1 1 302 -2205 251 279 25 0 chr2 26507189 26507268 -224180586 + HAL1 LINE L1 199 279 -2228 282 228 38 13 chr2 26507273 26507352 -224180502 + HAL1 LINE L1 199 279 -2228 3833 234 139 100 chr2 26507357 26508579 -224179275 + HAL1 LINE L1 199 1372 -1135 800 194 0 0 chr2 26508579 26508713 -224179141 + AluJo SINE Alu 1 134 -178 3833 234 139 100 chr2 26508713 26509240 -224178614 + HAL1 LINE L1 1372 1877 -630 2341 98 0 0 chr2 26509240 26509552 -224178302 + AluSx SINE Alu 1 312 0 3833 234 139 100 chr2 26509552 26509786 -224178068 + HAL1 LINE L1 1877 2400 -107 29 40 0 40 chr2 26509832 26509862 -224177992 + AT_rich Low_complexity Low_complexity 1 31 -42 2221 129 0 0 chr2 26509862 26510197 -224177657 + AluSx SINE Alu 1 312 0 29 40 0 40 chr2 26510197 26510223 -224177631 + AT_rich Low_complexity Low_complexity 31 57 -16 1833 184 3 0 chr2 26510223 26510534 -224177320 + AluJb SINE Alu 1 312 0 29 40 0 40 chr2 26510534 26510551 -224177303 + AT_rich Low_complexity Low_complexity 57 73 0 24 32 0 0 chr2 26511723 26511754 -224176100 + AT_rich Low_complexity Low_complexity 1 31 0 1611 62 48 140 chr2 26511875 26512211 -224175643 + L1MA1 LINE L1 5990 6294 -8 222 310 0 0 chr2 26512375 26512446 -224175408 - L3 LINE CR1 -156 1421 1351 2491 81 3 0 chr2 26512509 26512807 -224175047 - AluSp SINE Alu -10 303 5 2611 142 4 9 chr2 26512863 26513321 -224174533 - L1P LINE L1 -962 5184 4729 438 210 66 18 chr2 26513589 26513756 -224174098 + L1ME4a LINE L1 5946 6120 -1 345 230 56 112 chr2 26514435 26514596 -224173258 + MIR3 SINE MIR 56 207 -1 201 128 26 26 chr2 26515545 26515584 -224172270 - MIR SINE MIR -118 144 106 209 180 229 0 chr2 26516973 26517034 -224170820 - MIR3 SINE MIR -10 198 124 398 288 21 0 chr2 26517506 26517663 -224170191 + MIR SINE MIR 33 190 -61 595 305 52 5 chr2 26517733 26517946 -224169908 + MIR SINE MIR 15 237 -25 1879 172 3 0 chr2 26518344 26518640 -224169214 + AluJo SINE Alu 1 297 -15 267 243 14 0 chr2 26518849 26518919 -224168935 + LTR33 LTR ERVL 51 121 -400 2219 128 0 3 chr2 26519625 26519937 -224167917 + AluSx SINE Alu 1 311 -1 304 206 55 0 chr2 26519974 26520047 -224167807 - MER97c DNA MER1_type? -914 176 100 418 274 48 8 chr2 26520192 26520316 -224167538 - MIR SINE MIR -82 180 52 443 298 47 53 chr2 26520406 26520577 -224167277 - MIR SINE MIR -43 219 50 318 281 70 0 chr2 26520990 26521118 -224166736 + MIR3 SINE MIR 66 202 -6 294 315 73 30 chr2 26521178 26521343 -224166511 - MER5B DNA MER1_type -1 177 6 386 245 20 19 chr2 26521472 26521591 -224166263 + MIR SINE MIR 38 154 -58 592 318 16 24 chr2 26521598 26521850 -224166004 - MIR SINE MIR 0 262 13 472 295 174 9 chr2 26522471 26522695 -224165159 - L3 LINE CR1 -871 706 446 2316 261 85 47 chr2 26523023 26524120 -224163734 - HAL1 LINE L1 -7 2500 1363 296 273 13 0 chr2 26524116 26524193 -224163661 - HAL1 LINE L1 -1638 869 792 * 332 234 168 105 chr2 26524194 26524622 -224163232 - HAL1 LINE L1 -1989 518 64 367 275 58 0 chr2 26524671 26524809 -224163045 - L1MC4a LINE L1 -1915 5893 5748 2140 115 3 26 chr2 26525819 26526132 -224161722 + AluSx SINE Alu 1 306 -6 1856 53 0 8 chr2 26526343 26526587 -224161267 - L1PA7 LINE L1 0 6154 5913 657 113 35 22 chr2 26526506 26526658 -224161196 - L1PA7 LINE L1 -161 5993 5845 266 104 0 21 chr2 26527237 26527285 -224160569 + (GGGA)n Simple_repeat Simple_repeat 2 48 0 1554 72 36 5 chr2 26528094 26528317 -224159537 - MER30 DNA MER1_type 0 230 1 753 207 186 0 chr2 26528748 26528941 -224158913 + MIR SINE MIR 31 259 -3 1710 158 49 3 chr2 26528954 26529238 -224158616 + AluSx SINE Alu 1 297 -15 1121 133 0 0 chr2 26529272 26529430 -224158424 + FRAM SINE Alu 16 173 -3 412 262 24 49 chr2 26529538 26529702 -224158152 - LTR33 LTR ERVL -3 518 359 183 80 0 0 chr2 26530220 26530245 -224157609 + (A)n Simple_repeat Simple_repeat 1 25 0 285 98 0 0 chr2 26530256 26530297 -224157557 + (CA)n Simple_repeat Simple_repeat 1 41 0 537 298 80 36 chr2 26530425 26530650 -224157204 + MIR SINE MIR 14 248 -14 1615 130 0 0 chr2 26530659 26530875 -224156979 + AluSg/x SINE Alu 84 299 -13 2322 111 0 0 chr2 26530912 26531210 -224156644 + AluSq SINE Alu 1 298 -15 284 269 37 46 chr2 26531544 26531652 -224156202 - MER113 DNA MER1_type? -100 421 315 695 207 50 27 chr2 26531976 26532198 -224155656 - MER113 DNA MER1_type? -258 263 37 300 111 0 0 chr2 26532198 26532252 -224155602 + (TC)n Simple_repeat Simple_repeat 1 54 0 4805 180 23 11 chr2 26532853 26533089 -224154765 + L1MB7 LINE L1 5254 5486 -698 2204 142 0 0 chr2 26533089 26533400 -224154454 + AluJb SINE Alu 2 312 0 4805 180 23 11 chr2 26533400 26534079 -224153775 + L1MB7 LINE L1 5486 6180 -4 2153 141 0 0 chr2 26535989 26536293 -224151561 + AluSq SINE Alu 1 304 -9 372 290 131 0 chr2 26536472 26536617 -224151237 - MIR3 SINE MIR -9 199 36 197 175 0 0 chr2 26536740 26536780 -224151074 - MIR SINE MIR -134 74 35 801 291 115 47 chr2 26536956 26537982 -224149872 - L2 LINE L2 0 3272 2174 272 151 75 0 chr2 26537984 26538037 -224149817 - L2 LINE L2 -70 3243 3187 261 273 115 15 chr2 26538802 26538956 -224148898 + L1ME LINE L1 691 1156 -4845 470 293 115 19 chr2 26540456 26540770 -224147084 + L2 LINE L2 2541 2884 -430 233 328 112 15 chr2 26540946 26541080 -224146774 - MIR3 SINE MIR -46 162 16 252 0 0 0 chr2 26541949 26541977 -224145877 + (GA)n Simple_repeat Simple_repeat 1 28 0 213 39 0 0 chr2 26542225 26542251 -224145603 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 1371 62 0 0 chr2 26542251 26542429 -224145425 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 237 196 0 0 chr2 26542429 26542480 -224145374 + GA-rich Low_complexity Low_complexity 1 51 0 801 145 0 43 chr2 26543208 26543346 -224144508 - FLAM_C SINE Alu 0 133 2 3029 6 0 0 chr2 26543357 26543674 -224144180 - AluYb8 SINE Alu -1 317 1 859 125 7 13 chr2 26543708 26543860 -224143994 + L1PB2 LINE L1 5999 6149 -2 270 300 8 50 chr2 26544058 26544127 -224143727 + L3 LINE CR1 1127 1190 -387 2406 92 0 0 chr2 26544127 26544419 -224143435 - AluSc SINE Alu -14 295 4 270 300 8 50 chr2 26544419 26544469 -224143385 + L3 LINE CR1 1190 1241 -336 744 248 96 125 chr2 26544473 26545075 -224142779 - MLT1K LTR MaLR -2 586 2 248 345 90 7 chr2 26545121 26545266 -224142588 + L2 LINE L2 2704 2860 -454 2350 101 0 0 chr2 26545496 26545792 -224142062 + AluSx SINE Alu 1 296 -16 240 216 39 29 chr2 26546853 26546955 -224140899 + L1MEd LINE L1 83 185 -5934 421 299 59 51 chr2 26547022 26547276 -224140578 + L1MEd LINE L1 646 901 -5218 1606 218 28 14 chr2 26547281 26547811 -224140043 - L1MEc LINE L1 -3605 2610 2116 674 305 88 33 chr2 26547815 26548009 -224139845 - L1MC4a LINE L1 -1930 5878 5696 1958 196 0 0 chr2 26548009 26548321 -224139533 - AluSx SINE Alu 0 312 1 674 305 88 33 chr2 26548321 26548490 -224139364 - L1MC4a LINE L1 -2112 5696 5495 444 112 45 0 chr2 26548504 26548593 -224139261 + CT-rich Low_complexity Low_complexity 4 96 0 243 264 107 66 chr2 26548601 26548715 -224139139 - L1P5 LINE L1 -691 5465 5329 1805 138 53 76 chr2 26548715 26548815 -224139039 + MLT1B LTR MaLR 3 104 -286 2245 125 6 0 chr2 26548815 26549126 -224138728 - AluSq SINE Alu 0 313 1 1805 138 53 76 chr2 26549126 26549422 -224138432 + MLT1B LTR MaLR 104 390 0 243 264 107 66 chr2 26549422 26549498 -224138356 - L1P5 LINE L1 -827 5329 5258 2229 99 0 49 chr2 26549505 26549829 -224138025 + AluSg SINE Alu 2 309 -1 339 280 45 30 chr2 26549847 26549979 -224137875 + MER94 DNA DNA 1 134 0 3527 182 20 24 chr2 26550026 26550810 -224137044 - L1MC2 LINE L1 -2 6342 5562 1130 123 12 6 chr2 26550817 26550980 -224136874 + AluSg/x SINE Alu 123 286 -24 4534 203 49 62 chr2 26550990 26551972 -224135882 - L1MC2 LINE L1 -743 5403 4630 5610 60 17 14 chr2 26551972 26552687 -224135167 - SVA Other Other -1 1385 669 4534 203 49 62 chr2 26552687 26553278 -224134576 - L1MC2 LINE L1 -1516 4630 4032 24 32 0 0 chr2 26553312 26553343 -224134511 + AT_rich Low_complexity Low_complexity 1 31 0 361 271 52 66 chr2 26553346 26553370 -224134484 - L1MC4a LINE L1 -1007 5139 5116 2505 77 0 0 chr2 26553370 26553669 -224134185 - AluY SINE Alu -12 299 1 361 271 52 66 chr2 26553669 26553824 -224134030 - L1MC4a LINE L1 -1030 5116 4957 911 296 69 13 chr2 26553975 26554293 -224133561 + LTR16B LTR ERVL 129 464 0 385 289 70 22 chr2 26554771 26555044 -224132810 - L1MC4a LINE L1 -1326 4820 4535 459 286 54 42 chr2 26555178 26555437 -224132417 - L2 LINE L2 -187 3085 2824 350 345 52 61 chr2 26555475 26555597 -224132257 - MIR SINE MIR -30 232 111 1539 148 48 41 chr2 26555597 26555867 -224131987 + AluJo SINE Alu 25 296 -16 350 345 52 61 chr2 26555867 26555973 -224131881 - MIR SINE MIR -151 111 6 251 296 14 0 chr2 26556302 26556373 -224131481 - L2 LINE L2 0 3272 3201 330 182 0 0 chr2 26556563 26556629 -224131225 + CT-rich Low_complexity Low_complexity 4 69 0 311 271 35 0 chr2 26556629 26556714 -224131140 - L2 LINE L2 -1 3271 3184 522 267 48 6 chr2 26556954 26557119 -224130735 + MIR SINE MIR 32 203 -59 * 620 261 96 21 chr2 26557113 26557301 -224130553 - L2 LINE L2 -4 3309 3108 393 230 123 70 chr2 26557301 26557488 -224130366 - LTR16A1 LTR ERVL 0 457 261 830 119 8 0 chr2 26557621 26557755 -224130099 + (GGAA)n Simple_repeat Simple_repeat 1 135 0 586 169 8 8 chr2 26557939 26558063 -224129791 + GA-rich Low_complexity Low_complexity 2 125 0 526 265 15 46 chr2 26558424 26558620 -224129234 + MIR3 SINE MIR 19 208 0 732 284 34 5 chr2 26558953 26559157 -224128697 + MER63A DNA MER1_type 1 210 0 184 294 188 0 chr2 26559157 26559242 -224128612 - MIR SINE MIR -112 150 50 286 290 0 83 chr2 26559322 26559467 -224128387 + MIR SINE MIR 21 153 -109 291 341 0 0 chr2 26560253 26560341 -224127513 + (CA)n Simple_repeat Simple_repeat 2 89 0 219 360 33 7 chr2 26561755 26561908 -224125946 - MIR3 SINE MIR -30 178 22 2054 111 68 0 chr2 26562532 26562812 -224125042 + AluSx SINE Alu 1 299 -13 2532 110 30 46 chr2 26563549 26563915 -224123939 + MSTC LTR MaLR 1 360 -68 2323 107 0 3 chr2 26563915 26564224 -224123630 + AluSx SINE Alu 1 308 -4 2532 110 30 46 chr2 26564224 26564292 -224123562 + MSTC LTR MaLR 360 428 0 1215 152 43 0 chr2 26564437 26564647 -224123207 + MER20 DNA MER1_type 1 219 0 1416 267 56 45 chr2 26564700 26565235 -224122619 + LTR67 LTR ERVL 4 544 -13 283 315 100 54 chr2 26566240 26566370 -224121484 - L2 LINE L2 0 3272 3137 291 335 12 43 chr2 26566626 26566787 -224121067 - L2 LINE L2 -442 2872 2717 205 157 20 39 chr2 26567101 26567152 -224120702 + GA-rich Low_complexity Low_complexity 2 51 0 366 243 257 15 chr2 26567186 26567322 -224120532 - MIR3 SINE MIR -24 184 16 231 36 0 0 chr2 26567369 26567397 -224120457 + (TG)n Simple_repeat Simple_repeat 1 28 0 205 274 16 0 chr2 26568576 26568638 -224119216 + MIR3 SINE MIR 104 166 -42 196 281 0 18 chr2 26570061 26570118 -224117736 - L2 LINE L2 0 3313 3258 450 291 64 69 chr2 26570183 26570257 -224117597 + MIR SINE MIR 3 76 -186 2189 119 0 22 chr2 26570257 26570576 -224117278 - AluSx SINE Alu 0 312 1 450 291 64 69 chr2 26570576 26570704 -224117150 + MIR SINE MIR 76 204 -58 200 336 19 9 chr2 26570725 26570832 -224117022 - L2 LINE L2 -338 2934 2827 266 213 12 100 chr2 26571619 26571699 -224116155 - MIR SINE MIR -58 150 81 446 315 61 11 chr2 26572302 26572483 -224115371 - MIR3 SINE MIR -15 193 4 180 321 0 0 chr2 26573060 26573116 -224114738 - L2 LINE L2 -10 3262 3207 601 306 138 14 chr2 26573118 26573474 -224114380 - L3 LINE CR1 -77 1500 1101 216 67 0 0 chr2 26573677 26573707 -224114147 + (CA)n Simple_repeat Simple_repeat 2 31 0 432 51 0 0 chr2 26574250 26574309 -224113545 + (CA)n Simple_repeat Simple_repeat 1 59 0 224 313 52 10 chr2 26575543 26575639 -224112215 - L2 LINE L2 -20 3252 3153 562 255 32 58 chr2 26575889 26576077 -224111777 - MIR3 SINE MIR -6 202 20 263 323 24 73 chr2 26576521 26576685 -224111169 - L2 LINE L2 -214 3058 2903 229 380 23 0 chr2 26576900 26577029 -224110825 - MIR3 SINE MIR -11 197 66 622 209 16 8 chr2 26577333 26577462 -224110392 + MIR3 SINE MIR 58 187 -21 435 254 244 40 chr2 26578101 26578302 -224109552 + MIR SINE MIR 15 256 -6 267 320 40 0 chr2 26578576 26578676 -224109178 - MIR3 SINE MIR -21 187 84 187 337 23 23 chr2 26578691 26578777 -224109077 - MIR SINE MIR -106 156 71 525 308 41 0 chr2 26579130 26579302 -224108552 + MIR3 SINE MIR 20 198 -10 242 239 26 53 chr2 26579396 26579509 -224108345 + (TCTCTG)n Simple_repeat Simple_repeat 5 114 0 201 139 0 0 chr2 26579585 26579628 -224108226 + (TC)n Simple_repeat Simple_repeat 2 44 0 245 152 25 38 chr2 26579722 26579801 -224108053 + (CGGG)n Simple_repeat Simple_repeat 2 79 0 207 0 0 0 chr2 26579826 26579849 -224108005 + (CGG)n Simple_repeat Simple_repeat 3 25 0 214 201 10 29 chr2 26580979 26581090 -224106764 + (CA)n Simple_repeat Simple_repeat 1 108 0 * 228 35 0 0 chr2 26581089 26581118 -224106736 + (GA)n Simple_repeat Simple_repeat 2 30 0 532 270 26 7 chr2 26581219 26581371 -224106483 + MIR3 SINE MIR 52 206 -2 195 370 55 62 chr2 26582302 26582327 -224105527 + L2 LINE L2 2941 2965 -307 942 195 0 24 chr2 26582327 26582496 -224105358 - FRAM SINE Alu -1 165 1 195 370 55 62 chr2 26582496 26582762 -224105092 + L2 LINE L2 2965 3230 -42 401 313 17 22 chr2 26583358 26583499 -224104355 - MIR SINE MIR -71 137 16 393 269 172 0 chr2 26583846 26583991 -224103863 - MIR3 SINE MIR -3 205 36 580 273 44 24 chr2 26584052 26584257 -224103597 - MIR SINE MIR 0 262 54 1655 143 0 23 chr2 26584327 26584592 -224103262 + AluSx SINE Alu 2 260 -52 294 348 17 9 chr2 26585105 26585220 -224102634 - MIR3 SINE MIR -90 118 3 621 227 119 70 chr2 26585413 26585660 -224102194 + MIR SINE MIR 4 262 0 440 129 0 0 chr2 26585925 26585987 -224101867 + AluS SINE Alu 1 62 -251 2162 128 0 3 chr2 26586006 26586365 -224101489 + AluSx SINE Alu 1 358 0 257 356 61 8 chr2 26586891 26587023 -224100831 - MIR SINE MIR -77 185 47 284 252 114 41 chr2 26587210 26587333 -224100521 - MIR3 SINE MIR -41 167 36 540 45 0 0 chr2 26587826 26587893 -224099961 + (CAT)n Simple_repeat Simple_repeat 3 69 0 213 65 0 0 chr2 26587894 26587925 -224099929 + (TC)n Simple_repeat Simple_repeat 2 32 0 189 307 23 57 chr2 26587926 26588014 -224099840 + MIR SINE MIR 66 150 -112 496 256 143 36 chr2 26588064 26588232 -224099622 - MER5A DNA MER1_type 0 189 4 273 169 77 0 chr2 26588692 26588757 -224099097 - MLT1A2 LTR MaLR 0 374 305 1899 155 7 0 chr2 26588772 26589075 -224098779 + AluSx SINE Alu 2 306 -6 1136 113 0 39 chr2 26589075 26589268 -224098586 - L1PA13 LINE L1 -11 6152 5966 268 210 16 16 chr2 26589268 26589330 -224098524 - MLT1A2 LTR MaLR -123 242 181 948 318 149 16 chr2 26589455 26589805 -224098049 + L3 LINE CR1 1093 1510 -67 1227 270 28 47 chr2 26589805 26589952 -224097902 - MLT2D LTR ERVL 0 414 266 2140 115 0 3 chr2 26589952 26590247 -224097607 + AluSx SINE Alu 1 294 -18 1227 270 28 47 chr2 26590247 26590521 -224097333 - MLT2D LTR ERVL -148 266 1 948 318 149 16 chr2 26590521 26590594 -224097260 + L3 LINE CR1 1510 1572 -5 181 264 62 85 chr2 26590714 26590843 -224097011 - L2 LINE L2 -1 3312 3187 733 218 0 69 chr2 26592012 26592079 -224095775 - MIR SINE MIR -43 219 149 1770 174 27 0 chr2 26592079 26592377 -224095477 - AluJb SINE Alu -6 306 1 733 218 0 69 chr2 26592377 26592483 -224095371 - MIR SINE MIR -113 149 58 276 385 59 0 chr2 26592510 26592645 -224095209 - MIR SINE MIR -74 188 46 216 343 38 29 chr2 26593083 26593188 -224094666 - MER5B DNA MER1_type -65 113 8 214 268 188 18 chr2 26593974 26594086 -224093768 + MIR3 SINE MIR 66 196 -12 245 274 76 96 chr2 26594896 26595053 -224092801 - MIR3 SINE MIR -48 160 7 1924 251 136 76 chr2 26595085 26595512 -224092342 - L2 LINE L2 -25 3288 2888 2209 95 0 19 chr2 26595512 26595827 -224092027 + AluSq SINE Alu 1 309 -4 1924 251 136 76 chr2 26595827 26596842 -224091012 - L2 LINE L2 -425 2888 1764 185 288 208 0 chr2 26596868 26596993 -224090861 - MIR SINE MIR -92 170 20 202 287 17 96 chr2 26598249 26598364 -224089490 + MIR SINE MIR 30 135 -73 920 182 30 5 chr2 26598689 26598887 -224088967 + MIR SINE MIR 60 262 0 282 369 68 5 chr2 26599221 26599427 -224088427 + L3b LINE CR1 1106 1324 -259 288 0 0 0 chr2 26599786 26599818 -224088036 + (TG)n Simple_repeat Simple_repeat 2 33 0 1829 95 48 41 chr2 26600616 26600911 -224086943 + AluSx SINE Alu 1 297 -15 2206 115 3 3 chr2 26600912 26601225 -224086629 + AluSq SINE Alu 1 313 0 249 369 92 8 chr2 26601360 26601490 -224086364 + MIR3 SINE MIR 3 143 -65 434 296 101 13 chr2 26602443 26602602 -224085252 + MIR SINE MIR 35 207 -55 210 71 0 0 chr2 26602855 26602883 -224084971 + (G)n Simple_repeat Simple_repeat 1 28 0 476 306 0 0 chr2 26602897 26603077 -224084777 + G-rich Low_complexity Low_complexity 1 180 0 284 284 55 28 chr2 26603951 26604060 -224083794 + L2 LINE L2 3202 3313 0 2022 100 76 0 chr2 26604451 26604741 -224083113 + AluSx SINE Alu 1 312 0 2165 117 3 3 chr2 26605100 26605409 -224082445 + AluSq SINE Alu 5 313 0 249 369 92 8 chr2 26605545 26605675 -224082179 + MIR3 SINE MIR 3 143 -65 2212 92 0 0 chr2 26605906 26606219 -224081635 + AluSx SINE Alu 1 313 0 192 267 43 60 chr2 26606245 26606361 -224081493 + MIR SINE MIR 26 139 -123 685 276 56 42 chr2 26606431 26606645 -224081209 + MIR SINE MIR 46 262 0 180 158 298 0 chr2 26606680 26606737 -224081117 - L2 LINE L2 -32 3240 3167 475 259 129 0 chr2 26607274 26607421 -224080433 - MIR3 SINE MIR -9 199 34 326 333 73 30 chr2 26607464 26607629 -224080225 + MIR SINE MIR 41 212 -50 251 308 0 0 chr2 26607801 26607879 -224079975 - L2 LINE L2 -215 3057 2980 333 260 17 157 chr2 26608042 26608190 -224079664 - MIR3 SINE MIR -1 207 102 1097 197 22 31 chr2 26608190 26608413 -224079441 + MER58A DNA MER1_type 4 224 0 333 260 17 157 chr2 26608413 26608499 -224079355 - MIR3 SINE MIR -106 102 6 513 275 0 8 chr2 26609172 26609292 -224078562 - L2 LINE L2 -2 3311 3193 227 243 27 27 chr2 26609327 26609428 -224078426 + C-rich Low_complexity Low_complexity 1 101 0 1030 289 66 40 chr2 26609750 26609916 -224077938 - L1ME4a LINE L1 -4 6117 5957 1786 168 3 0 chr2 26609916 26610207 -224077647 - AluJb SINE Alu -20 292 1 1030 289 66 40 chr2 26610207 26610583 -224077271 - L1ME4a LINE L1 -164 5957 5561 343 240 16 58 chr2 26610704 26610825 -224077029 + L2 LINE L2 2970 3085 -187 515 192 19 0 chr2 26611175 26611279 -224076575 + MIR SINE MIR 44 149 -59 1973 114 29 0 chr2 26611284 26611581 -224076273 + AluSx SINE Alu 5 309 0 233 217 0 0 chr2 26613608 26613654 -224074200 - MIR3 SINE MIR -10 198 153 564 251 112 6 chr2 26613679 26613858 -224073996 - MIR SINE MIR -2 260 63 426 218 123 35 chr2 26614178 26614348 -224073506 - MIR3 SINE MIR -23 185 1 672 326 0 5 chr2 26614871 26615061 -224072793 + MIR3 SINE MIR 16 204 -4 317 292 39 15 chr2 26615733 26615863 -224071991 + MIR SINE MIR 85 217 -45 388 251 13 71 chr2 26616627 26616767 -224071087 - MIR3 SINE MIR -49 159 32 670 262 5 32 chr2 26617211 26617370 -224070484 - MIR SINE MIR 0 262 100 195 42 0 0 chr2 26617370 26617394 -224070460 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 279 0 0 0 chr2 26617393 26617424 -224070430 + (GA)n Simple_repeat Simple_repeat 2 32 0 670 262 5 32 chr2 26617394 26617451 -224070403 - MIR SINE MIR -162 100 81 320 215 43 4 chr2 26617825 26617926 -224069928 - MIR SINE MIR -65 143 73 293 321 142 0 chr2 26618436 26618570 -224069284 - MIR3 SINE MIR -34 174 22 193 340 64 11 chr2 26618651 26618745 -224069109 + MIR SINE MIR 34 132 -130 345 251 66 81 chr2 26620634 26620826 -224067028 - MIR3 SINE MIR -1 261 73 2039 137 3 3 chr2 26620826 26621125 -224066729 + AluJb SINE Alu 1 299 -13 345 251 66 81 chr2 26621125 26621187 -224066667 - MIR3 SINE MIR -189 73 12 1869 111 42 29 chr2 26622572 26622879 -224064975 + AluSx SINE Alu 2 312 0 476 301 22 22 chr2 26622981 26623164 -224064690 - MIR3 SINE MIR -22 186 4 461 230 74 20 chr2 26623532 26623680 -224064174 + MER112 DNA MER1_type 99 254 -6 554 213 27 13 chr2 26624587 26624737 -224063117 - MER103 DNA DNA -1 165 14 343 310 70 29 chr2 26624917 26625088 -224062766 - MIR SINE MIR -84 178 1 2395 96 0 0 chr2 26625250 26625562 -224062292 + AluSx SINE Alu 1 312 0 2136 107 0 0 chr2 26625985 26626295 -224061559 - AluSx SINE Alu 0 311 2 201 39 0 0 chr2 26626327 26626353 -224061501 + (CA)n Simple_repeat Simple_repeat 2 27 0 260 379 57 0 chr2 26626355 26626479 -224061375 - MIR3 SINE MIR -43 165 35 252 0 0 0 chr2 26626481 26626509 -224061345 + (CA)n Simple_repeat Simple_repeat 2 29 0 213 269 97 90 chr2 26626785 26626833 -224061021 - MIR SINE MIR -51 211 165 2287 96 0 0 chr2 26626833 26627155 -224060699 + AluSq SINE Alu 1 322 0 213 269 97 90 chr2 26627155 26627239 -224060615 - MIR SINE MIR -97 165 77 1931 159 0 0 chr2 26628062 26628364 -224059490 - AluSx SINE Alu -10 302 1 286 391 29 7 chr2 26628489 26628627 -224059227 - L3 LINE CR1 -824 753 613 2037 90 76 0 chr2 26628835 26629123 -224058731 + AluSg SINE Alu 1 310 0 568 218 75 14 chr2 26629485 26629632 -224058222 - MIR SINE MIR -73 189 34 183 313 75 0 chr2 26630448 26630528 -224057326 - MIR3 SINE MIR -19 189 104 2202 88 3 7 chr2 26630530 26630824 -224057030 + AluSq SINE Alu 1 293 -20 661 273 87 55 chr2 26630867 26631171 -224056683 + L1ME1 LINE L1 5682 5975 -359 1913 120 10 7 chr2 26631171 26631463 -224056391 + AluJo SINE Alu 1 293 -19 661 273 87 55 chr2 26631463 26631644 -224056210 + L1ME1 LINE L1 5975 6334 0 233 379 39 0 chr2 26633054 26633157 -224054697 + L2 LINE L2 3157 3263 -9 218 347 74 8 chr2 26634283 26634404 -224053450 - MIR3 SINE MIR -28 180 52 274 250 66 13 chr2 26634649 26634725 -224053129 - MIR3 SINE MIR -20 188 109 286 296 97 0 chr2 26635010 26635137 -224052717 - MIR3 SINE MIR -85 123 13 248 56 0 0 chr2 26636050 26636086 -224051768 - MADE1 DNA Mariner 0 80 45 221 231 175 4 chr2 26636274 26636411 -224051443 - MIR SINE MIR -1 261 93 223 151 94 0 chr2 26686948 26687001 -224000853 - MIR SINE MIR -112 150 93 2111 114 3 17 chr2 26687275 26687572 -224000282 + AluSx SINE Alu 2 294 -18 659 136 0 10 chr2 26687572 26687675 -224000179 - AluJo/FLAM SINE Alu -194 118 17 203 333 0 13 chr2 26687873 26687948 -223999906 - MIR SINE MIR -86 122 49 487 308 36 41 chr2 26688279 26688313 -223999541 - L1MC4a LINE L1 -1880 5928 5895 1884 174 0 19 chr2 26688313 26688623 -223999231 - AluJo SINE Alu -8 304 1 487 308 36 41 chr2 26688623 26688809 -223999045 - L1MC4a LINE L1 -1913 5895 5709 419 270 85 21 chr2 26688985 26689174 -223998680 - L1MC4a LINE L1 -2184 5624 5424 1182 195 27 14 chr2 26689183 26689404 -223998450 - AluJb SINE Alu -88 224 1 894 203 39 0 chr2 26689409 26689591 -223998263 - AluJo SINE Alu -1 311 123 275 320 46 13 chr2 26689591 26689716 -223998138 - L1MC4a LINE L1 -2395 5413 5281 1976 132 2 103 chr2 26689716 26690079 -223997775 - L1MB8 LINE L1 0 6178 5865 1639 167 29 4 chr2 26690079 26690386 -223997468 + AluSx SINE Alu 1 314 0 1976 132 2 103 chr2 26690386 26690467 -223997387 - L1MB8 LINE L1 -313 5865 5777 275 320 46 13 chr2 26690467 26690494 -223997360 - L1MC4a LINE L1 -2527 5281 5256 305 289 40 62 chr2 26690641 26690751 -223997103 - L1MC4a LINE L1 -1089 5057 4946 2251 95 3 30 chr2 26690751 26691055 -223996799 - AluSx SINE Alu -16 296 1 305 289 40 62 chr2 26691055 26691232 -223996622 - L1MC4a LINE L1 -1200 4946 4769 250 223 77 179 chr2 26691266 26691348 -223996506 - L1MC5 LINE L1 -48 7913 7824 2286 120 3 0 chr2 26691348 26691657 -223996197 + AluSx SINE Alu 1 310 -2 250 223 77 179 chr2 26691657 26691728 -223996126 - L1MC5 LINE L1 -137 7824 7747 6731 113 6 44 chr2 26691728 26692735 -223995119 + LTR5 LTR ERVK 1 969 0 250 223 77 179 chr2 26692735 26692756 -223995098 - L1MC5 LINE L1 -214 7747 7725 1682 163 3 55 chr2 26692756 26693082 -223994772 - AluJb SINE Alu -3 309 1 250 223 77 179 chr2 26693082 26693179 -223994675 - L1MC5 LINE L1 -236 7725 7668 1996 186 116 13 chr2 26693181 26693639 -223994215 + MLT1D LTR MaLR 1 505 0 2031 115 42 7 chr2 26693709 26693995 -223993859 - AluJb SINE Alu -16 296 1 294 231 77 0 chr2 26694144 26694235 -223993619 + MIR3 SINE MIR 62 159 -49 752 169 0 0 chr2 26694363 26694481 -223993373 + FLAM_C SINE Alu 1 118 -15 26 50 0 0 chr2 26694481 26694521 -223993333 + AT_rich Low_complexity Low_complexity 1 40 0 611 207 45 34 chr2 26694747 26694830 -223993024 + MER53 DNA DNA 2 83 -106 2969 113 20 73 chr2 26694830 26694981 -223992873 - LTR26B LTR ERV1 -1 530 372 1767 155 33 7 chr2 26694981 26695284 -223992570 - AluJo SINE Alu -1 311 1 2969 113 20 73 chr2 26695284 26695504 -223992350 - LTR26B LTR ERV1 -159 372 196 1740 156 33 7 chr2 26695504 26695779 -223992075 - AluJb SINE Alu -10 302 21 2969 113 20 73 chr2 26695779 26695966 -223991888 - LTR26B LTR ERV1 -335 196 1 611 207 45 34 chr2 26695966 26696061 -223991793 + MER53 DNA DNA 83 182 -7 2151 140 0 0 chr2 26696133 26696426 -223991428 + AluSx SINE Alu 1 293 -19 1995 136 32 23 chr2 26696511 26696820 -223991034 + AluSx SINE Alu 1 312 0 254 278 59 19 chr2 26697657 26697764 -223990090 - MIR SINE MIR -65 143 51 2411 75 20 0 chr2 26698029 26698321 -223989533 + AluSx SINE Alu 3 300 -12 2885 111 89 81 chr2 26698679 26698909 -223988945 + LTR24C LTR ERV1 1 228 -407 2327 95 3 3 chr2 26698909 26699203 -223988651 - AluSx SINE Alu -18 294 1 2885 111 89 81 chr2 26699203 26699602 -223988252 + LTR24C LTR ERV1 228 635 0 2652 166 73 8 chr2 26699647 26700166 -223987688 - MER41A LTR ERV1 0 554 2 192 264 92 0 chr2 26700363 26700450 -223987404 + L2 LINE L2 2939 3033 -239 196 316 94 8 chr2 26700666 26700783 -223987071 + L2 LINE L2 3182 3308 -5 1488 123 0 0 chr2 26701200 26701395 -223986459 + AluSx SINE Alu 1 195 -117 282 73 0 0 chr2 26701395 26701436 -223986418 + AluSx SINE Alu 254 294 -8 227 300 57 57 chr2 26701531 26701671 -223986183 + L2 LINE L2 2910 3049 -223 1591 177 30 7 chr2 26701836 26702107 -223985747 - AluJo SINE Alu -29 283 7 2115 135 0 7 chr2 26702147 26702443 -223985411 + AluSx SINE Alu 3 296 -16 2253 148 45 5 chr2 26702450 26702869 -223984985 - LTR56 LTR ERV1 -2 443 8 3987 117 29 0 chr2 26702934 26703551 -223984303 + MER41B LTR ERV1 1 635 0 2323 102 6 6 chr2 26703632 26703945 -223983909 - AluSp SINE Alu 0 313 1 1783 193 3 3 chr2 26703945 26704245 -223983609 - AluJb SINE Alu -12 300 1 2061 80 9 49 chr2 26704275 26704554 -223983300 + MER4E LTR ERV1 1 267 -512 2177 83 31 14 chr2 26704554 26704844 -223983010 + AluSg SINE Alu 1 295 -15 2061 80 9 49 chr2 26704844 26704890 -223982964 + MER4E LTR ERV1 267 313 -466 1510 70 74 0 chr2 26704901 26705116 -223982738 + MER4E LTR ERV1 536 766 0 261 339 33 25 chr2 26705223 26705344 -223982510 + MIR SINE MIR 22 143 -65 2390 84 0 13 chr2 26705647 26705958 -223981896 + AluSx SINE Alu 1 307 -5 220 243 129 0 chr2 26707092 26707162 -223980692 - L2 LINE L2 -842 2472 2394 297 54 0 0 chr2 26707351 26707388 -223980466 - AluSp/q SINE Alu -35 268 232 2328 116 0 0 chr2 26708179 26708482 -223979372 + AluSx SINE Alu 1 303 -9 689 289 44 18 chr2 26708564 26708789 -223979065 - MIR SINE MIR -20 242 12 319 302 134 13 chr2 26708833 26708982 -223978872 - MIR3 SINE MIR -21 187 21 706 137 32 8 chr2 26709592 26709716 -223978138 + FLAM_C SINE Alu 1 127 -16 21 0 0 0 chr2 26709716 26709737 -223978117 + AT_rich Low_complexity Low_complexity 1 21 0 312 221 117 0 chr2 26710115 26710192 -223977662 + MIR3 SINE MIR 93 178 -30 2232 88 27 10 chr2 26710223 26710520 -223977334 - AluY SINE Alu -9 302 1 1836 150 49 0 chr2 26710520 26710806 -223977048 - AluJo SINE Alu -12 300 1 1921 170 0 7 chr2 26711986 26712292 -223975562 + AluJb SINE Alu 1 304 -8 2192 145 0 0 chr2 26712299 26712609 -223975245 + AluSx SINE Alu 1 310 -2 27 0 0 0 chr2 26713180 26713207 -223974647 + AT_rich Low_complexity Low_complexity 1 27 0 833 146 0 0 chr2 26713553 26713683 -223974171 + FLAM_A SINE Alu 4 133 0 303 293 57 9 chr2 26714524 26714630 -223973224 + L3 LINE CR1 1182 1292 -285 310 381 19 12 chr2 26714704 26714864 -223972990 + MER117 DNA MER1_type 33 193 -4 1184 221 19 47 chr2 26714972 26715082 -223972772 - Charlie4a DNA MER1_type -1453 508 396 2409 70 7 10 chr2 26715082 26715383 -223972471 + AluY SINE Alu 1 300 -11 1184 221 19 47 chr2 26715383 26715477 -223972377 - Charlie4a DNA MER1_type -1565 396 301 2252 117 3 0 chr2 26715477 26715775 -223972079 - AluSx SINE Alu -13 299 1 1184 221 19 47 chr2 26715775 26715931 -223971923 - Charlie4a DNA MER1_type -1660 301 157 479 296 0 22 chr2 26716536 26716671 -223971183 + MIR3 SINE MIR 30 161 -47 212 244 0 0 chr2 26716851 26716896 -223970958 + MIR3 SINE MIR 157 201 -7 2076 133 7 3 chr2 26718781 26719074 -223968780 + AluSx SINE Alu 1 294 -18 369 227 153 23 chr2 26719503 26719607 -223968247 - MER112 DNA MER1_type -45 215 126 180 0 0 0 chr2 26719607 26719627 -223968227 + (TG)n Simple_repeat Simple_repeat 2 21 0 369 227 153 23 chr2 26719627 26719698 -223968156 - MER112 DNA MER1_type -134 126 17 2238 86 41 10 chr2 26720801 26721092 -223966762 - AluSx SINE Alu -12 300 1 278 369 56 6 chr2 26721141 26721301 -223966553 + MIR3 SINE MIR 39 206 -2 2058 121 44 7 chr2 26721381 26721679 -223966175 - AluSc SINE Alu 0 309 1 1800 138 73 10 chr2 26721679 26721968 -223965886 - AluJo SINE Alu -3 309 3 207 205 0 0 chr2 26722091 26722130 -223965724 - MIR SINE MIR -58 150 112 209 178 0 22 chr2 26722402 26722447 -223965407 - MIR SINE MIR -71 137 94 2614 93 43 24 chr2 26723012 26723432 -223964422 - MSTA LTR MaLR 0 428 1 361 237 200 0 chr2 26723540 26723675 -223964179 - MIR3 SINE MIR -45 163 2 2319 97 7 13 chr2 26723692 26724000 -223963854 + AluSx SINE Alu 1 306 -6 2711 43 0 0 chr2 26724008 26724310 -223963544 + AluY SINE Alu 3 304 -7 584 134 85 12 chr2 26724310 26724456 -223963398 + Tigger3(Golem) DNA MER2_type 2409 2569 -459 1795 186 0 3 chr2 26724456 26724751 -223963103 - AluJo SINE Alu -18 294 1 584 134 85 12 chr2 26724751 26724762 -223963092 + Tigger3(Golem) DNA MER2_type 2569 2578 -450 * 1672 115 35 0 chr2 26724752 26725013 -223962841 + Tigger3(Golem) DNA MER2_type 2747 3016 -13 1275 99 0 5 chr2 26725125 26725327 -223962527 + AluSc SINE Alu 1 299 -10 817 215 0 7 chr2 26725330 26725474 -223962380 + AluJo/FRAM SINE Alu 137 279 -33 189 0 0 0 chr2 26725489 26725510 -223962344 + (TA)n Simple_repeat Simple_repeat 2 22 0 1343 128 84 0 chr2 26725515 26725754 -223962100 - L1MB3 LINE L1 -19 6164 5902 2275 113 0 7 chr2 26725754 26726063 -223961791 - AluY SINE Alu -4 307 1 1098 162 5 44 chr2 26726073 26726277 -223961577 - AluJb SINE Alu -13 299 104 2248 111 10 3 chr2 26726306 26726612 -223961242 - AluSx SINE Alu -3 309 2 606 165 18 0 chr2 26726613 26726722 -223961132 - AluSq/x SINE Alu -198 115 5 2220 148 15 18 chr2 26726727 26727118 -223960736 - L1MB3 LINE L1 -274 5909 5520 245 182 192 40 chr2 26727140 26727239 -223960615 - L1ME4a LINE L1 -2 6119 6006 271 240 42 52 chr2 26728474 26728570 -223959284 - MIR SINE MIR -111 151 57 899 109 0 0 chr2 26728944 26729063 -223958791 - AluJ SINE Alu -188 124 6 2535 55 0 10 chr2 26729070 26729377 -223958477 - AluY SINE Alu -7 304 1 1212 168 56 5 chr2 26729380 26729594 -223958260 - AluJb SINE Alu -3 309 85 378 293 61 14 chr2 26729659 26729806 -223958048 - L1M4 LINE L1 -1836 4310 4157 194 318 32 0 chr2 26729961 26730024 -223957830 + L2 LINE L2 1234 1298 -2016 * 952 189 5 32 chr2 26730014 26730204 -223957650 - AluJ SINE Alu -16 296 112 277 235 20 39 chr2 26730269 26730371 -223957483 + L2 LINE L2 1290 1389 -1925 2190 103 3 0 chr2 26730525 26730837 -223957017 - AluSp SINE Alu 0 313 1 1911 297 121 37 chr2 26730837 26731872 -223955982 + L2 LINE L2 1681 2805 -509 415 267 38 45 chr2 26731873 26732139 -223955715 - HAL1 LINE L1 -1420 1087 824 2128 106 3 28 chr2 26732167 26732488 -223955366 - AluSq SINE Alu 0 313 1 315 302 79 0 chr2 26732696 26732822 -223955032 + LTR33A LTR ERVL 380 515 -8 412 260 56 38 chr2 26732936 26733224 -223954630 - L1M4 LINE L1 -2979 3167 2875 342 225 171 9 chr2 26733415 26733526 -223954328 + MIR3 SINE MIR 59 187 -21 212 192 26 154 chr2 26733615 26733693 -223954161 - L2 LINE L2 -185 3087 3020 332 177 97 115 chr2 26733715 26733796 -223954058 - L2 LINE L2 0 3313 3233 354 79 270 0 chr2 26733796 26733859 -223953995 - MADE1 DNA Mariner 0 80 1 332 177 97 115 chr2 26733859 26733890 -223953964 - L2 LINE L2 -80 3233 3203 307 213 153 12 chr2 26735417 26735518 -223952336 - FLAM_C SINE Alu -9 124 22 6141 33 12 17 chr2 26736550 26737301 -223950553 - SVA Other Other 0 1386 640 1928 118 24 0 chr2 26737564 26737852 -223950002 - AluSx SINE Alu -17 295 1 29 0 0 0 chr2 26737868 26737897 -223949957 + AT_rich Low_complexity Low_complexity 1 29 0 763 204 0 15 chr2 26737897 26738034 -223949820 - AluJo SINE Alu -176 136 2 940 147 0 40 chr2 26738038 26738215 -223949639 - AluJo SINE Alu -21 291 122 348 196 38 38 chr2 26738216 26738349 -223949505 - HAL1 LINE L1 -1352 1155 1023 248 254 116 87 chr2 26738351 26738524 -223949330 - LTR33A LTR ERVL -3 520 343 493 86 0 0 chr2 26738663 26738733 -223949121 - Alu SINE Alu -11 301 232 552 254 127 25 chr2 26738917 26739114 -223948740 - MLT1K LTR MaLR -6 582 366 * 1622 191 39 95 chr2 26739110 26739596 -223948258 + MLT1D LTR MaLR 47 505 0 1380 119 86 8 chr2 26739687 26739930 -223947924 + MER21A LTR ERV1 1 262 -669 2599 125 77 93 chr2 26739938 26740133 -223947721 + MER21A LTR ERV1 377 574 -357 2363 71 13 7 chr2 26740133 26740443 -223947411 - AluSx SINE Alu 0 312 1 2599 125 77 93 chr2 26740443 26740805 -223947049 + MER21A LTR ERV1 574 925 -6 437 19 0 0 chr2 26740878 26740931 -223946923 + MADE1 DNA Mariner 27 79 -1 290 162 0 121 chr2 26741024 26741123 -223946731 - L1ME3A LINE L1 0 6170 6084 256 154 3 0 chr2 26741192 26741246 -223946608 - AluSq SINE Alu -7 296 251 2082 79 0 0 chr2 26741246 26741511 -223946343 - AluSq SINE Alu -48 265 1 527 225 137 0 chr2 26741511 26741693 -223946161 - L1ME3A LINE L1 -195 5975 5769 416 123 15 0 chr2 26741704 26741769 -223946085 - MER41A LTR ERV1 -89 465 400 1667 161 0 20 chr2 26741904 26742065 -223945789 - AluJb SINE Alu -19 293 139 2322 96 0 0 chr2 26742065 26742366 -223945488 - AluSc SINE Alu -8 301 1 1667 161 0 20 chr2 26742366 26742503 -223945351 - AluJb SINE Alu -173 139 1 219 125 0 0 chr2 26742575 26742615 -223945239 + (TA)n Simple_repeat Simple_repeat 2 41 0 577 139 20 50 chr2 26742633 26742734 -223945120 + AluJo/FLAM SINE Alu 20 117 -195 809 109 0 0 chr2 26742736 26742872 -223944982 - AluSg/x SINE Alu 0 308 173 23 33 0 0 chr2 26742883 26742913 -223944941 + AT_rich Low_complexity Low_complexity 1 30 0 2261 87 3 0 chr2 26744095 26744393 -223943461 - AluSx SINE Alu -11 301 3 597 149 18 26 chr2 26744407 26744521 -223943333 - MER65A LTR ERV1 -268 177 65 2254 87 7 0 chr2 26744525 26744824 -223943030 - AluSx SINE Alu -7 305 5 2306 86 3 0 chr2 26744909 26745211 -223942643 - AluSp SINE Alu -10 303 1 2198 89 0 35 chr2 26745240 26745554 -223942300 + AluSx SINE Alu 2 304 -8 183 297 0 0 chr2 26745581 26745618 -223942236 - L3 LINE CR1 -104 1473 1437 317 282 27 27 chr2 26745677 26745787 -223942067 + L1MC4 LINE L1 6609 6718 -1324 1841 156 7 0 chr2 26745836 26746138 -223941716 - AluJb SINE Alu -8 304 1 2464 111 47 43 chr2 26746204 26746596 -223941258 - MER65A LTR ERV1 0 445 49 2143 100 13 0 chr2 26746596 26746895 -223940959 - AluSq SINE Alu -10 303 1 2464 111 47 43 chr2 26746895 26746945 -223940909 - MER65A LTR ERV1 -396 49 1 1193 177 52 20 chr2 26746986 26747234 -223940620 - AluJo SINE Alu -36 276 21 2762 72 8 44 chr2 26747403 26747792 -223940062 - THE1C LTR MaLR 0 375 1 728 186 0 0 chr2 26748822 26748940 -223938914 - FLAM_C SINE Alu -15 118 1 31 0 0 0 chr2 26748947 26748978 -223938876 + AT_rich Low_complexity Low_complexity 1 31 0 202 224 0 0 chr2 26748993 26749042 -223938812 + A-rich Low_complexity Low_complexity 1 49 0 356 191 29 59 chr2 26749042 26749110 -223938744 - Alu SINE Alu -13 289 234 1506 191 29 0 chr2 26749157 26749460 -223938394 + AluJb SINE Alu 1 311 0 287 108 0 0 chr2 26749460 26749497 -223938357 - FLAM_A SINE Alu -13 120 84 1927 128 0 47 chr2 26750381 26750702 -223937152 - AluSx SINE Alu -6 306 1 794 143 8 8 chr2 26750718 26750844 -223937010 - FLAM_C SINE Alu -16 127 2 1392 178 7 43 chr2 26750892 26751196 -223936658 - AluJb SINE Alu -19 293 1 1293 221 136 57 chr2 26751337 26751423 -223936431 + MER34B LTR ERV1 1 79 -486 2182 100 0 13 chr2 26751423 26751709 -223936145 + AluSx SINE Alu 1 284 -28 225 0 0 0 chr2 26751709 26751734 -223936120 + (TTAAA)n Simple_repeat Simple_repeat 3 27 0 2182 100 0 13 chr2 26751734 26751746 -223936108 + AluSx SINE Alu 284 295 -17 1293 221 136 57 chr2 26751746 26752183 -223935671 + MER34B LTR ERV1 79 565 0 998 162 0 0 chr2 26752742 26752909 -223934945 - AluJb SINE Alu -6 306 140 431 280 120 13 chr2 26752992 26753217 -223934637 + MIR SINE MIR 11 259 -3 247 289 97 18 chr2 26754567 26754681 -223933173 - MIR SINE MIR -80 182 60 1929 118 0 0 chr2 26754981 26755261 -223932593 - AluSx SINE Alu -7 305 26 1813 78 0 0 chr2 26755905 26756150 -223931704 + AluY SINE Alu 1 245 -66 4388 136 74 35 chr2 26756150 26757411 -223930443 + pTR5 LTR ERV1 743 2399 -39 538 46 0 130 chr2 26757411 26757519 -223930335 + AluYa5/8 SINE Alu 218 311 0 36 23 0 0 chr2 26757619 26757662 -223930192 + GC_rich Low_complexity Low_complexity 1 43 0 1978 98 0 0 chr2 26757935 26758210 -223929644 - AluSx SINE Alu -5 307 33 1058 120 44 0 chr2 26758238 26758396 -223929458 - AluJo SINE Alu -1 301 137 2006 98 0 21 chr2 26759316 26759601 -223928253 - AluSc SINE Alu -30 279 1 386 285 81 12 chr2 26759940 26760112 -223927742 + L1ME LINE L1 5567 5750 -371 513 263 165 46 chr2 26760118 26760513 -223927341 - LTR67 LTR ERVL -6 551 110 2097 91 3 3 chr2 26761212 26761498 -223926356 + AluSg SINE Alu 1 286 -24 848 213 77 5 chr2 26761547 26761768 -223926086 - LTR37A LTR ERV1 -13 413 177 805 139 25 0 chr2 26761941 26762063 -223925791 - AluJo SINE Alu -184 128 4 1944 168 83 13 chr2 26762063 26762461 -223925393 - MLT1C LTR MaLR -39 428 3 2176 92 3 22 chr2 26762473 26762787 -223925067 + AluSc SINE Alu 1 308 -1 2255 156 38 0 chr2 26762791 26763162 -223924692 - MER57A LTR ERV1 -18 385 1 307 190 76 13 chr2 26763286 26763365 -223924489 - MER31-int LTR ERV1 -749 4187 4104 1630 179 0 0 chr2 26763472 26763745 -223924109 - AluJb SINE Alu -37 275 3 379 314 32 54 chr2 26763817 26764002 -223923852 - MER31-int LTR ERV1 -918 4018 3838 1990 126 0 3 chr2 26764075 26764376 -223923478 + AluSx SINE Alu 1 300 -12 825 211 6 0 chr2 26764664 26764839 -223923015 - FRAM SINE Alu -4 172 1 2127 84 11 0 chr2 26765074 26765360 -223922494 + AluY SINE Alu 1 289 -22 931 196 0 0 chr2 26765371 26765534 -223922320 + AluJb SINE Alu 137 299 -13 2134 113 0 7 chr2 26765539 26765840 -223922014 + AluSx SINE Alu 1 299 -13 1788 146 0 29 chr2 26765842 26766157 -223921697 + AluJo SINE Alu 5 310 -2 27 0 0 0 chr2 26766180 26766207 -223921647 + AT_rich Low_complexity Low_complexity 1 27 0 335 270 7 40 chr2 26766230 26766378 -223921476 - MER31-int LTR ERV1 -2171 2765 2623 1901 133 3 7 chr2 26766541 26766835 -223921019 + AluSx SINE Alu 1 293 -19 1431 186 128 38 chr2 26767073 26767439 -223920415 + Charlie1b DNA MER1_type 6 404 -119 839 132 0 0 chr2 26767477 26767598 -223920256 - FLAM_C SINE Alu -22 121 1 385 163 109 11 chr2 26767609 26767701 -223920153 + Charlie1b DNA MER1_type 423 523 0 2054 117 0 13 chr2 26767723 26768030 -223919824 - AluSg SINE Alu -7 303 1 22 0 0 0 chr2 26768425 26768447 -223919407 + AT_rich Low_complexity Low_complexity 1 22 0 1178 84 0 13 chr2 26768457 26768611 -223919243 - AluSx SINE Alu -155 157 6 534 232 0 0 chr2 26768663 26768775 -223919079 + FRAM SINE Alu 65 176 0 1105 73 0 0 chr2 26769395 26769532 -223918322 - AluSq/x SINE Alu -175 137 1 2116 112 0 10 chr2 26770434 26770730 -223917124 + AluSx SINE Alu 1 293 -19 218 308 132 0 chr2 26770767 26770858 -223916996 + MIR SINE MIR 28 130 -132 742 135 0 0 chr2 26771494 26771605 -223916249 - AluSx SINE Alu -10 302 192 995 104 0 0 chr2 26771605 26771739 -223916115 - AluSx SINE Alu -172 140 7 402 186 40 90 chr2 26771957 26772134 -223915720 + MER69 DNA AcHobo 2046 2213 -313 290 299 110 7 chr2 26772155 26772309 -223915545 + MLT1L LTR MaLR 369 538 -77 2000 120 7 0 chr2 26772315 26772615 -223915239 + AluSx SINE Alu 4 305 -7 226 176 118 24 chr2 26772690 26772775 -223915079 + MER69 DNA AcHobo 2229 2321 -205 864 243 52 22 chr2 26772775 26773043 -223914811 - L1MCb LINE L1 -5686 359 84 2002 128 3 0 chr2 26773047 26773343 -223914511 - AluSq SINE Alu -16 297 1 185 306 32 51 chr2 26773376 26773533 -223914321 - L2 LINE L2 -286 2986 2833 247 244 0 0 chr2 26773659 26773704 -223914150 - L2 LINE L2 -17 3255 3211 198 0 0 0 chr2 26773715 26773737 -223914117 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 1844 86 0 4 chr2 26774084 26774328 -223913526 - AluSx SINE Alu -56 256 14 9051 186 39 42 chr2 26774369 26774948 -223912906 + L1MC2 LINE L1 2860 3439 -2905 730 178 0 0 chr2 26774948 26775066 -223912788 + FLAM_C SINE Alu 1 118 -15 9051 186 39 42 chr2 26775066 26775123 -223912731 + L1MC2 LINE L1 3439 3495 -2849 1716 168 3 7 chr2 26775123 26775415 -223912439 + AluJb SINE Alu 3 293 -19 9051 186 39 42 chr2 26775415 26775989 -223911865 + L1MC2 LINE L1 3495 4069 -2275 2220 94 0 7 chr2 26775989 26776298 -223911556 + AluSq SINE Alu 1 307 -6 9051 186 39 42 chr2 26776298 26776816 -223911038 + L1MC2 LINE L1 4069 4587 -1757 2053 108 7 0 chr2 26776816 26777113 -223910741 - AluSx SINE Alu -13 299 1 9051 186 39 42 chr2 26777113 26778717 -223909137 + L1MC2 LINE L1 4587 6184 -160 1604 161 0 30 chr2 26778717 26779015 -223908839 + AluJo SINE Alu 1 289 -23 9051 186 39 42 chr2 26779015 26779175 -223908679 + L1MC2 LINE L1 6184 6343 -1 213 283 45 101 chr2 26779316 26779514 -223908340 + L2 LINE L2 3126 3312 -1 2413 116 53 39 chr2 26780016 26780448 -223907406 + MER65A LTR ERV1 1 438 -7 1952 141 0 7 chr2 26780949 26781254 -223906600 - AluSx SINE Alu -9 303 1 228 182 0 0 chr2 26781506 26781550 -223906304 + CT-rich Low_complexity Low_complexity 1 44 0 1175 174 9 22 chr2 26781550 26781780 -223906074 - AluJo SINE Alu 0 312 86 186 233 14 96 chr2 26782497 26782523 -223905331 - MIR SINE MIR -42 220 193 2290 81 10 0 chr2 26782523 26782818 -223905036 - AluSq SINE Alu -14 299 2 186 233 14 96 chr2 26782818 26782864 -223904990 - MIR SINE MIR -69 193 154 380 322 67 34 chr2 26782925 26783164 -223904690 - MIR SINE MIR -1 261 15 577 297 94 5 chr2 26783581 26783783 -223904071 + MIR SINE MIR 3 222 -40 2195 122 0 0 chr2 26783791 26784103 -223903751 - AluSx SINE Alu 0 312 1 540 200 105 0 chr2 26784161 26784266 -223903588 + FLAM_C SINE Alu 1 116 -17 619 115 0 0 chr2 26784292 26784379 -223903475 + AluJ/FRAM SINE Alu 218 304 -8 1876 129 48 0 chr2 26784452 26784747 -223903107 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 26784774 26784795 -223903059 + AT_rich Low_complexity Low_complexity 1 21 0 183 226 0 57 chr2 26785037 26785090 -223902764 + MIR3 SINE MIR 118 167 -41 983 136 0 7 chr2 26785690 26785873 -223901981 - AluSg/x SINE Alu 0 308 127 2243 89 0 9 chr2 26785881 26786196 -223901658 - AluSx SINE Alu 0 312 1 2141 92 30 0 chr2 26786198 26786493 -223901361 - AluSp SINE Alu -9 304 1 1537 203 3 7 chr2 26786495 26786790 -223901064 - AluJb SINE Alu -18 294 1 495 259 87 40 chr2 26787088 26787327 -223900527 + MIR SINE MIR 1 243 -19 226 137 0 98 chr2 26787873 26787924 -223899930 + Tigger5 DNA MER2_type 1266 1311 -1012 387 343 50 11 chr2 26787924 26788105 -223899749 - MIR SINE MIR -55 207 20 22 0 0 0 chr2 26789808 26789830 -223898024 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 26791891 26791912 -223895942 + GC_rich Low_complexity Low_complexity 1 21 0 368 271 0 66 chr2 26792936 26793058 -223894796 - L1MC4 LINE L1 -1336 6706 6593 2111 94 3 17 chr2 26793654 26793951 -223893903 + AluSx SINE Alu 1 293 -19 428 234 66 36 chr2 26794676 26794712 -223893142 + MIR SINE MIR 121 154 -108 562 113 0 0 chr2 26794712 26794792 -223893062 + MADE1 DNA Mariner 1 80 0 428 234 66 36 chr2 26794792 26794892 -223892962 + MIR SINE MIR 154 261 -1 357 246 184 18 chr2 26795425 26795539 -223892315 - MIR SINE MIR -93 169 37 1178 202 30 11 chr2 26795569 26795831 -223892023 - MLT2C1 LTR ERVL -11 386 120 1176 179 9 5 chr2 26795834 26796052 -223891802 + AluJb SINE Alu 85 303 -9 717 144 17 0 chr2 26796052 26796170 -223891684 - MLT2C1 LTR ERVL -272 125 6 1932 150 6 13 chr2 26796170 26796484 -223891370 + AluSx SINE Alu 1 312 0 2281 97 3 0 chr2 26796800 26797111 -223890743 - AluSx SINE Alu 0 312 1 2122 97 0 3 chr2 26797142 26797432 -223890422 + AluSg SINE Alu 2 290 -20 418 196 147 0 chr2 26798083 26798185 -223889669 - L1ME3A LINE L1 -12 6158 6042 239 188 62 0 chr2 26798185 26798233 -223889621 + MER57A LTR ERV1 295 345 -58 1226 246 131 12 chr2 26798260 26798687 -223889167 - L1ME3A LINE L1 -114 6056 5579 298 61 76 0 chr2 26798879 26798945 -223888909 + (TA)n Simple_repeat Simple_repeat 2 72 0 273 463 0 0 chr2 26799077 26799185 -223888669 + polypyrimidine Low_complexity Low_complexity 1 108 0 25 0 0 0 chr2 26799393 26799418 -223888436 + AT_rich Low_complexity Low_complexity 1 25 0 2077 111 0 10 chr2 26799717 26800023 -223887831 + AluSx SINE Alu 1 303 -9 2467 53 0 0 chr2 26800633 26800933 -223886921 - AluY SINE Alu -11 300 1 1562 157 23 33 chr2 26801036 26801336 -223886518 - AluJo SINE Alu -15 297 1 386 305 88 24 chr2 26801586 26801783 -223886071 - L1MB5 LINE L1 -319 5855 5638 352 253 96 34 chr2 26802451 26802597 -223885257 + MIR SINE MIR 50 204 -58 1066 261 82 61 chr2 26802929 26803369 -223884485 + L1MC4a LINE L1 5572 6020 -101 215 242 177 0 chr2 26803927 26803989 -223883865 - MIR3 SINE MIR -10 198 126 2025 225 140 22 chr2 26804209 26804715 -223883139 + MLT1E LTR MaLR 28 593 0 414 267 8 15 chr2 26804844 26804975 -223882879 + MER94 DNA DNA 3 132 -2 1442 158 3 67 chr2 26806012 26806309 -223881545 - L1MB8 LINE L1 -14 6164 5887 1705 177 0 7 chr2 26806423 26806722 -223881132 + AluJb SINE Alu 1 297 -15 2130 106 23 3 chr2 26807772 26808075 -223879779 - AluSg SINE Alu -1 309 1 439 270 185 40 chr2 26808549 26808770 -223879084 + MIR SINE MIR 5 256 -6 327 290 94 7 chr2 26808793 26808931 -223878923 - HAL1b LINE L1 0 1348 1199 243 0 0 0 chr2 26808932 26808959 -223878895 + (CA)n Simple_repeat Simple_repeat 2 28 0 1029 85 7 0 chr2 26809009 26809162 -223878692 + L1MA4 LINE L1 6140 6293 -7 2344 84 0 7 chr2 26809186 26809494 -223878360 - AluSx SINE Alu -4 308 3 896 279 104 69 chr2 26809810 26809906 -223877948 - L1MB8 LINE L1 -744 5402 5311 2752 10 0 0 chr2 26809906 26810217 -223877637 - AluYa5 SINE Alu 0 311 1 896 279 104 69 chr2 26810217 26811391 -223876463 - L1MB8 LINE L1 -835 5311 4487 1921 153 0 0 chr2 26811427 26811727 -223876127 - AluJb SINE Alu -12 300 1 740 234 47 0 chr2 26811762 26811954 -223875900 - L1MB7 LINE L1 -13 6171 5971 2298 80 0 0 chr2 26812192 26812491 -223875363 + AluY SINE Alu 1 299 -12 380 290 101 42 chr2 26812492 26813036 -223874818 - L1MB8 LINE L1 -1945 4201 3626 841 113 47 33 chr2 26813040 26813190 -223874664 + FRAM SINE Alu 14 165 -11 703 172 94 0 chr2 26813391 26813519 -223874335 - MER3 DNA MER1_type -18 191 52 540 196 155 27 chr2 26813551 26813699 -223874155 + MER58C DNA MER1_type 49 215 0 293 241 46 19 chr2 26813707 26813815 -223874039 + MER113 DNA MER1_type? 1 111 -410 2028 112 7 0 chr2 26813917 26814203 -223873651 - AluSx SINE Alu -24 288 1 1071 208 162 25 chr2 26814233 26814627 -223873227 + MER113 DNA MER1_type? 74 521 0 2176 83 14 0 chr2 26814872 26815161 -223872693 + AluSg SINE Alu 1 293 -17 500 103 26 0 chr2 26815213 26815291 -223872563 + Alu SINE Alu 223 302 -8 708 184 61 114 chr2 26815640 26815868 -223871986 - L1ME1 LINE L1 -6 6160 5945 1111 156 38 0 chr2 26815873 26816059 -223871795 + MER20 DNA MER1_type 27 219 0 624 227 23 8 chr2 26816073 26816205 -223871649 + MER58 DNA MER1_type 3 136 -205 1289 99 0 16 chr2 26816225 26816407 -223871447 - MLT2B2 LTR ERVL -336 179 1 2421 196 94 79 chr2 26816409 26817544 -223870310 - L1ME1 LINE L1 -711 5467 4395 238 402 6 0 chr2 26818811 26818975 -223868879 - L2 LINE L2 -887 2427 2263 2127 106 7 0 chr2 26818975 26819278 -223868576 - AluSq SINE Alu -8 305 1 2294 66 7 3 chr2 26819424 26819728 -223868126 - AluSq SINE Alu -8 305 1 34 42 0 0 chr2 26819737 26819785 -223868069 + AT_rich Low_complexity Low_complexity 1 48 0 692 278 68 34 chr2 26820265 26821081 -223866773 - L1ME4a LINE L1 -223 5898 5023 230 329 45 78 chr2 26821297 26821540 -223866314 + L2 LINE L2 2953 3187 -85 832 131 0 29 chr2 26821807 26821944 -223865910 + FLAM_C SINE Alu 7 139 -4 1908 110 7 11 chr2 26822351 26822654 -223865200 - AluJb SINE Alu 0 302 1 181 303 232 10 chr2 26823301 26823400 -223864454 - L2 LINE L2 -5 3308 3188 276 246 0 15 chr2 26823414 26823479 -223864375 + MIR SINE MIR 118 181 -81 2445 74 0 0 chr2 26824272 26824583 -223863271 + AluY SINE Alu 1 311 0 1562 144 60 21 chr2 26824712 26824876 -223862978 - AluJo SINE Alu -16 296 115 423 38 0 0 chr2 26824876 26824929 -223862925 + (TG)n Simple_repeat Simple_repeat 2 54 0 1562 144 60 21 chr2 26824929 26825048 -223862806 - AluJo SINE Alu -197 115 2 21 0 0 0 chr2 26825050 26825071 -223862783 + AT_rich Low_complexity Low_complexity 1 21 0 2024 103 13 39 chr2 26825081 26825392 -223862462 + AluSx SINE Alu 1 303 -9 354 157 100 129 chr2 26825797 26825849 -223862005 - L1ME3A LINE L1 -224 5946 5894 2056 127 0 0 chr2 26825849 26826161 -223861693 - AluSx SINE Alu 0 312 1 354 157 100 129 chr2 26826161 26826247 -223861607 - L1ME3A LINE L1 -276 5894 5811 315 0 0 0 chr2 26826983 26827018 -223860836 + (CA)n Simple_repeat Simple_repeat 1 35 0 2191 104 3 3 chr2 26827379 26827687 -223860167 + AluSx SINE Alu 1 308 -4 863 45 22 15 chr2 26830626 26830760 -223857094 + (TTTC)n Simple_repeat Simple_repeat 1 135 0 1764 120 0 29 chr2 26830762 26831038 -223856816 - AluSx SINE Alu -44 268 1 1597 174 91 15 chr2 26831269 26831608 -223856246 - MLT1A1 LTR MaLR 0 365 1 2364 61 0 3 chr2 26831735 26832032 -223855822 - AluY SINE Alu -15 296 1 1623 181 43 51 chr2 26833121 26833514 -223854340 - MLT1B LTR MaLR 0 390 1 815 299 17 9 chr2 26833514 26833745 -223854109 + MIR SINE MIR 30 262 0 2040 134 0 0 chr2 26834143 26834435 -223853419 - AluSx SINE Alu -20 292 1 207 352 77 39 chr2 26834567 26834749 -223853105 + MIR SINE MIR 31 219 -43 705 158 71 24 chr2 26835018 26835145 -223852709 + FLAM_A SINE Alu 1 133 0 342 0 0 0 chr2 26835219 26835257 -223852597 + (GA)n Simple_repeat Simple_repeat 1 38 0 205 259 93 0 chr2 26836250 26836304 -223851550 - L2 LINE L2 -214 3058 3000 242 238 8 25 chr2 26836457 26836579 -223851275 + (TTA)n Simple_repeat Simple_repeat 3 122 0 403 245 51 0 chr2 26836891 26836989 -223850865 + MIR SINE MIR 104 206 -56 676 217 59 0 chr2 26837416 26837568 -223850286 - L1M4 LINE L1 -1143 5003 4843 1331 231 54 9 chr2 26837573 26837906 -223849948 - L1M4 LINE L1 -1368 4778 4431 5854 134 33 19 chr2 26837907 26838232 -223849622 - L1MA8 LINE L1 0 6291 5972 2250 104 0 0 chr2 26838232 26838540 -223849314 - AluSg1 SINE Alu -1 308 1 5854 134 33 19 chr2 26838540 26839387 -223848467 - L1MA8 LINE L1 -319 5972 5108 3444 200 45 8 chr2 26839439 26840219 -223847635 - L1M4 LINE L1 -1794 4352 3544 446 287 0 16 chr2 26840222 26840344 -223847510 + MER5B DNA MER1_type 43 162 -16 253 263 72 66 chr2 26841908 26842060 -223845794 + L2 LINE L2 3103 3255 -17 1921 204 161 21 chr2 26842522 26842703 -223845151 - L1ME3A LINE L1 -8 6162 6008 452 144 10 31 chr2 26842703 26842800 -223845054 - L1MB7 LINE L1 0 6184 6090 1921 204 161 21 chr2 26842800 26843178 -223844676 - L1ME3A LINE L1 -162 6008 5525 3900 106 3 25 chr2 26845083 26845525 -223842329 + MER41A LTR ERV1 1 430 -124 1814 126 0 7 chr2 26845525 26845795 -223842059 - AluSg SINE Alu -5 305 38 3900 106 3 25 chr2 26845795 26845918 -223841936 + MER41A LTR ERV1 430 554 0 180 0 0 0 chr2 26845958 26845978 -223841876 + (CAGCC)n Simple_repeat Simple_repeat 4 23 0 268 159 191 0 chr2 26847009 26847072 -223840782 - MIR3 SINE MIR -25 183 109 1986 128 0 3 chr2 26847084 26847382 -223840472 + AluJb SINE Alu 2 298 -14 312 314 0 0 chr2 26847736 26847822 -223840032 + MIR SINE MIR 170 255 -7 2050 199 91 56 chr2 26848234 26848649 -223839205 - MLT1E3 LTR MaLR 0 624 180 2238 88 0 0 chr2 26848649 26848944 -223838910 - AluSc SINE Alu -14 295 1 2050 199 91 56 chr2 26848944 26849131 -223838723 - MLT1E3 LTR MaLR -444 180 1 1693 171 0 20 chr2 26849224 26849529 -223838325 - AluJo SINE Alu -13 299 1 207 0 0 0 chr2 26849563 26849586 -223838268 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2122 104 3 0 chr2 26849588 26849876 -223837978 - AluSx SINE Alu -23 289 1 408 289 228 14 chr2 26850400 26850611 -223837243 + MIR SINE MIR 2 257 -5 26 0 0 0 chr2 26851910 26851936 -223835918 + AT_rich Low_complexity Low_complexity 1 26 0 1832 129 20 27 chr2 26851952 26852246 -223835608 + AluJo SINE Alu 6 297 -15 1848 220 255 16 chr2 26852341 26853056 -223834798 - L1ME1 LINE L1 -12 6154 5272 866 129 8 0 chr2 26853085 26853217 -223834637 - AluSq/x SINE Alu -180 133 1 2428 184 78 24 chr2 26853218 26853805 -223834049 - L1ME1 LINE L1 -864 5282 4664 249 250 150 0 chr2 26854644 26854724 -223833130 - MIR SINE MIR -110 152 61 275 227 84 130 chr2 26855463 26855537 -223832317 + MIR SINE MIR 110 175 -87 2894 130 26 49 chr2 26855537 26856068 -223831786 - L1MB3 LINE L1 -8 6175 5657 275 227 84 130 chr2 26856068 26856147 -223831707 + MIR SINE MIR 175 256 -6 561 143 0 0 chr2 26856700 26856784 -223831070 + AluJ/FLAM SINE Alu 1 84 -228 753 249 15 51 chr2 26856789 26857062 -223830792 - L1ME1 LINE L1 -1639 4507 4245 28 29 0 0 chr2 26857372 26857407 -223830447 + AT_rich Low_complexity Low_complexity 1 35 0 493 267 147 16 chr2 26857520 26857711 -223830143 - MER115 DNA AcHobo -477 216 1 915 44 35 0 chr2 26858336 26858450 -223829404 - AluSq/x SINE Alu -194 118 1 1874 144 3 0 chr2 26858896 26859188 -223828666 - AluSx SINE Alu -19 293 1 337 270 44 36 chr2 26859347 26859484 -223828370 - L1ME4a LINE L1 -21 6100 5963 32 57 0 0 chr2 26859613 26859666 -223828188 + AT_rich Low_complexity Low_complexity 1 53 0 283 257 145 7 chr2 26859668 26859820 -223828034 - L1ME4a LINE L1 -247 5915 5743 25 31 0 0 chr2 26860026 26860058 -223827796 + AT_rich Low_complexity Low_complexity 1 32 0 684 283 40 0 chr2 26861316 26861514 -223826340 + MER115 DNA AcHobo 488 693 0 1029 168 0 0 chr2 26862148 26862309 -223825545 + FRAM SINE Alu 1 161 -5 336 323 85 8 chr2 26862380 26862510 -223825344 - MIR SINE MIR -71 191 52 1943 125 10 0 chr2 26862631 26862919 -223824935 - AluSq SINE Alu -18 295 5 203 167 48 0 chr2 26863435 26863477 -223824377 + (TTATA)n Simple_repeat Simple_repeat 5 48 0 217 211 88 0 chr2 26864776 26864833 -223823021 - L2 LINE L2 0 3313 3252 818 128 21 21 chr2 26864871 26865012 -223822842 + LTR23 LTR ERV1 259 399 -38 236 257 125 29 chr2 26865651 26865787 -223822067 - L1ME LINE L1 -306 5815 5667 1652 139 4 25 chr2 26867501 26867775 -223820079 + AluJb SINE Alu 1 268 -44 264 167 0 0 chr2 26867792 26867840 -223820014 + (CA)n Simple_repeat Simple_repeat 2 49 0 195 42 0 0 chr2 26867840 26867864 -223819990 + (TG)n Simple_repeat Simple_repeat 2 25 0 1770 83 75 136 chr2 26868082 26868307 -223819547 + MER1B DNA MER1_type 1 197 -2515 2192 112 3 0 chr2 26868307 26868619 -223819235 - AluSq SINE Alu 0 313 1 1770 83 75 136 chr2 26868619 26868754 -223819100 + MER1B DNA MER1_type 197 339 0 960 149 17 23 chr2 26869447 26869622 -223818232 + MER20 DNA MER1_type 4 177 -42 1671 133 6 63 chr2 26869630 26869780 -223818074 + AluJo SINE Alu 1 125 -187 2355 74 0 0 chr2 26869780 26870077 -223817777 + AluY SINE Alu 1 297 -14 1671 133 6 63 chr2 26870077 26870241 -223817613 + AluJo SINE Alu 125 297 -15 288 0 0 0 chr2 26870257 26870289 -223817565 + (TG)n Simple_repeat Simple_repeat 1 32 0 265 336 8 22 chr2 26870540 26870674 -223817180 + CT-rich Low_complexity Low_complexity 5 136 0 2167 109 3 3 chr2 26871471 26871783 -223816071 + AluSx SINE Alu 1 312 0 1289 32 0 37 chr2 26871793 26871980 -223815874 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 182 313 52 52 chr2 26872406 26872521 -223815333 - MIR3 SINE MIR -89 119 5 407 277 29 22 chr2 26874145 26874282 -223813572 + MIR3 SINE MIR 37 174 -34 243 252 29 29 chr2 26874900 26875003 -223812851 + CT-rich Low_complexity Low_complexity 3 105 0 2226 98 0 13 chr2 26875150 26875455 -223812399 + AluSx SINE Alu 1 301 -11 2074 106 20 0 chr2 26876414 26876706 -223811148 + AluSq SINE Alu 1 298 -15 28 29 0 0 chr2 26876986 26877021 -223810833 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr2 26877125 26877160 -223810694 + AT_rich Low_complexity Low_complexity 1 35 0 1134 148 21 145 chr2 26877375 26877487 -223810367 - AluSx SINE Alu -6 296 172 342 0 0 0 chr2 26877487 26877525 -223810329 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 1134 148 21 145 chr2 26877525 26877750 -223810104 - AluSx SINE Alu -130 172 1 1785 138 3 7 chr2 26878884 26879180 -223808674 - AluSx SINE Alu -14 298 4 365 300 36 18 chr2 26879578 26879688 -223808166 - MIR SINE MIR -63 145 34 1338 226 50 83 chr2 26880086 26880249 -223807605 - L1ME4a LINE L1 0 6121 5954 647 180 82 0 chr2 26880249 26880371 -223807483 - FLAM_C SINE Alu 0 133 2 1338 226 50 83 chr2 26880371 26880660 -223807194 - L1ME4a LINE L1 -167 5954 5657 216 0 0 0 chr2 26880660 26880684 -223807170 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2024 101 0 14 chr2 26880686 26880982 -223806872 - AluSc SINE Alu -17 292 1 1338 226 50 83 chr2 26880982 26881106 -223806748 - L1ME4a LINE L1 -465 5656 5560 1109 202 32 32 chr2 26881950 26882198 -223805656 - MLT1B LTR MaLR -142 248 1 902 158 7 26 chr2 26883155 26883307 -223804547 - AluJb SINE Alu -163 149 1 635 239 186 5 chr2 26883379 26883567 -223804287 - MIR SINE MIR -24 238 17 2182 98 17 3 chr2 26883755 26884050 -223803804 + AluSg SINE Alu 1 299 -11 311 306 0 0 chr2 26884135 26884207 -223803647 + (CA)n Simple_repeat Simple_repeat 1 72 0 565 250 14 29 chr2 26886394 26886534 -223801320 + MIR SINE MIR 7 144 -118 2010 99 8 0 chr2 26887239 26887502 -223800352 + AluSg SINE Alu 26 290 -20 2206 106 33 0 chr2 26887905 26888207 -223799647 - AluSx SINE Alu 0 312 1 297 293 41 0 chr2 26888246 26888369 -223799485 + L1M4 LINE L1 2716 2843 -3303 334 294 206 52 chr2 26888535 26889294 -223798560 + HAL1 LINE L1 8 897 -1610 1716 165 19 38 chr2 26889294 26889610 -223798244 + AluJb SINE Alu 1 310 -2 334 294 206 52 chr2 26889610 26889650 -223798204 + HAL1 LINE L1 897 930 -1577 1187 226 95 34 chr2 26889684 26890200 -223797654 + HAL1 LINE L1 1140 1756 -751 2272 106 3 7 chr2 26890200 26890502 -223797352 + AluSx SINE Alu 1 301 -11 1187 226 95 34 chr2 26890502 26890625 -223797229 + HAL1 LINE L1 1756 1870 -637 310 335 131 31 chr2 26890794 26891084 -223796770 - L3 LINE CR1 -1 1576 1258 665 200 8 0 chr2 26891136 26891256 -223796598 - MER5A DNA MER1_type -2 187 67 2209 122 0 0 chr2 26891256 26891551 -223796303 - AluSx SINE Alu -17 295 1 212 304 58 0 chr2 26892414 26892483 -223795371 - MIR SINE MIR -6 256 184 708 150 59 53 chr2 26893187 26893224 -223794630 + MER53 DNA DNA 2 37 -152 2506 39 0 0 chr2 26893224 26893541 -223794313 + AluY SINE Alu 1 317 0 708 150 59 53 chr2 26893541 26893687 -223794167 + MER53 DNA DNA 37 189 0 490 289 93 41 chr2 26893849 26894002 -223793852 + MIR SINE MIR 3 175 -87 2386 97 0 3 chr2 26894002 26894310 -223793544 + AluSx SINE Alu 1 307 -5 490 289 93 41 chr2 26894310 26894402 -223793452 + MIR SINE MIR 175 261 -1 2096 94 10 28 chr2 26894415 26894740 -223793114 + AluSx SINE Alu 1 320 0 692 206 8 8 chr2 26894852 26894983 -223792871 - FLAM_C SINE Alu -2 131 1 645 296 129 13 chr2 26895004 26895237 -223792617 - MIR SINE MIR 0 262 3 267 266 43 33 chr2 26895549 26895706 -223792148 - MIR SINE MIR -2 260 44 2449 92 0 0 chr2 26896292 26896595 -223791259 + AluSg SINE Alu 1 303 -7 37 69 0 0 chr2 26897053 26897125 -223790729 + AT_rich Low_complexity Low_complexity 1 72 0 905 173 26 42 chr2 26897180 26897352 -223790502 + AluJo SINE Alu 122 292 -20 1868 130 0 4 chr2 26897352 26897613 -223790241 + AluSx SINE Alu 1 260 -52 905 173 26 42 chr2 26897613 26897631 -223790223 + AluJo SINE Alu 292 309 -3 480 312 41 0 chr2 26897716 26897886 -223789968 - L2 LINE L2 -558 2756 2580 1914 157 14 0 chr2 26897927 26898221 -223789633 + AluJb SINE Alu 1 298 -14 1860 139 0 37 chr2 26898243 26898537 -223789317 + AluJo SINE Alu 14 296 -16 2103 117 0 0 chr2 26898592 26898896 -223788958 + AluSx SINE Alu 11 314 0 652 210 6 19 chr2 26898896 26899053 -223788801 + L1ME LINE L1 5228 5382 -764 418 228 57 24 chr2 26899120 26899243 -223788611 + MLT1F1 LTR MaLR 433 559 -8 328 158 0 0 chr2 26899250 26899307 -223788547 + L1MC4 LINE L1 7938 7994 -48 393 296 99 60 chr2 26900253 26900486 -223787368 - L2 LINE L2 -1 3271 3030 2342 82 3 7 chr2 26900897 26901200 -223786654 + AluSq SINE Alu 1 302 -11 2825 13 0 3 chr2 26904600 26904908 -223782946 - AluYb8 SINE Alu -11 307 1 347 269 65 9 chr2 26904999 26905107 -223782747 - MIR3 SINE MIR -14 194 81 193 219 0 24 chr2 26905174 26905215 -223782639 - MIR SINE MIR -131 77 38 21 0 0 0 chr2 26905396 26905417 -223782437 + AT_rich Low_complexity Low_complexity 1 21 0 720 294 21 5 chr2 26905691 26905878 -223781976 + MIR SINE MIR 23 212 -50 277 260 68 17 chr2 26907870 26908047 -223779807 + L1ME LINE L1 5584 5769 -352 1793 167 7 7 chr2 26910358 26910651 -223777203 + AluJo SINE Alu 6 298 -14 404 255 116 55 chr2 26911415 26911817 -223776037 - L1ME3 LINE L1 -196 5966 5548 441 271 40 99 chr2 26913008 26913159 -223774695 - MER91A DNA MER1_type -54 142 1 180 239 22 0 chr2 26913817 26913863 -223773991 + L2 LINE L2 3267 3313 0 257 291 68 8 chr2 26915612 26915729 -223772125 - L1ME4a LINE L1 -53 6068 5945 322 262 37 28 chr2 26915730 26915837 -223772017 - L1ME4a LINE L1 -2 6119 6012 1077 173 239 30 chr2 26917011 26917380 -223770474 + MLT1D LTR MaLR 60 505 0 * 1207 154 35 27 chr2 26917380 26917705 -223770149 - MLT1D LTR MaLR -112 393 24 2517 87 0 3 chr2 26918678 26918990 -223768864 + AluSq SINE Alu 1 311 -2 300 265 154 19 chr2 26919991 26920153 -223767701 + MER5A DNA MER1_type 5 188 -1 199 218 91 18 chr2 26921117 26921172 -223766682 + MIR SINE MIR 2 60 -202 * 267 230 111 87 chr2 26921138 26921220 -223766634 + MER5A DNA MER1_type 61 148 -41 1720 175 24 0 chr2 26921220 26921511 -223766343 + AluJo SINE Alu 1 298 -14 267 230 111 87 chr2 26921511 26921554 -223766300 + MER5A DNA MER1_type 148 189 0 188 317 12 85 chr2 26921620 26921784 -223766070 + L2 LINE L2 2910 3061 -211 21 36 0 0 chr2 26922040 26922068 -223765786 + AT_rich Low_complexity Low_complexity 1 28 0 263 315 67 27 chr2 26922136 26922285 -223765569 + L2 LINE L2 3109 3263 -9 2304 70 14 3 chr2 26922299 26922586 -223765268 + AluY SINE Alu 1 290 -21 275 89 0 0 chr2 26923553 26923598 -223764256 - AluSp/q SINE Alu -6 297 253 24 0 0 0 chr2 26923902 26923926 -223763928 + AT_rich Low_complexity Low_complexity 1 24 0 2248 104 7 3 chr2 26924462 26924761 -223763093 + AluSq SINE Alu 1 300 -13 1328 150 0 54 chr2 26926190 26926430 -223761424 - AluJo SINE Alu -1 311 85 840 152 7 7 chr2 26926430 26926581 -223761273 - MER58B DNA MER1_type -10 331 181 1382 184 15 31 chr2 26926732 26927058 -223760796 + L1MC4 LINE L1 6794 7114 -928 537 16 0 0 chr2 26927155 26927217 -223760637 + (TG)n Simple_repeat Simple_repeat 2 63 0 1735 161 3 14 chr2 26927490 26927830 -223760024 - AluJo SINE Alu 0 337 1 1856 79 55 62 chr2 26927895 26928216 -223759638 + AluY SINE Alu 1 311 0 2560 60 0 0 chr2 26928452 26928751 -223759103 - AluY SINE Alu -11 300 2 213 283 0 0 chr2 26929817 26929870 -223757984 + MER5B DNA MER1_type 3 55 -123 225 256 0 110 chr2 26930567 26930649 -223757205 + L2 LINE L2 3107 3179 -93 184 348 130 9 chr2 26930835 26930950 -223756904 - L2 LINE L2 -5 3308 3180 1708 103 96 11 chr2 26930962 26931258 -223756596 - AluSx SINE Alu 0 321 4 378 213 28 46 chr2 26932057 26932165 -223755689 - MER5A DNA MER1_type -80 109 4 630 274 238 7 chr2 26932387 26932800 -223755054 - Charlie8 DNA MER1_type -2264 153 27 325 329 125 38 chr2 26932827 26932982 -223754872 - L2 LINE L2 -567 2747 2607 1760 162 36 12 chr2 26932982 26933316 -223754538 - MER2 DNA MER2_type 0 344 3 325 329 125 38 chr2 26933316 26933585 -223754269 - L2 LINE L2 -707 2607 2286 415 309 119 32 chr2 26933606 26934135 -223753719 + L2 LINE L2 2696 3267 -5 2084 159 8 17 chr2 26934493 26934844 -223753010 - MER7A DNA MER2_type 0 346 1 537 273 97 31 chr2 26935007 26935234 -223752620 + MIR SINE MIR 21 262 0 248 148 548 0 chr2 26938164 26938279 -223749575 - MIR3 SINE MIR -23 185 8 281 222 185 30 chr2 26939898 26940033 -223747821 - MIR3 SINE MIR -15 193 38 2165 163 36 71 chr2 26940462 26940562 -223747292 + MLT1D LTR MaLR 1 103 -402 2115 128 10 7 chr2 26940562 26940868 -223746986 + AluJb SINE Alu 1 307 -5 2165 163 36 71 chr2 26940868 26941000 -223746854 + MLT1D LTR MaLR 103 238 -267 1977 163 7 0 chr2 26941000 26941295 -223746559 + AluJb SINE Alu 1 297 -15 2165 163 36 71 chr2 26941295 26941584 -223746270 + MLT1D LTR MaLR 238 505 0 376 319 132 14 chr2 26941836 26941980 -223745874 + L2 LINE L2 3112 3272 0 2127 113 115 36 chr2 26942551 26942942 -223744912 - MSTA LTR MaLR -6 422 1 2211 103 10 10 chr2 26943096 26943406 -223744448 - AluSq SINE Alu -1 312 3 1713 129 75 7 chr2 26943910 26944190 -223743664 + AluJb SINE Alu 1 299 -13 1961 97 0 32 chr2 26944442 26944721 -223743133 + AluSx SINE Alu 1 270 -42 24 0 0 0 chr2 26944965 26944989 -223742865 + GC_rich Low_complexity Low_complexity 1 24 0 237 310 0 0 chr2 26945559 26945617 -223742237 + MIR SINE MIR 183 240 -22 918 184 0 76 chr2 26945656 26945724 -223742130 + MER45A DNA AcHobo 6 78 -1503 2357 104 3 3 chr2 26945724 26946033 -223741821 - AluSx SINE Alu -3 309 1 918 184 0 76 chr2 26946033 26946149 -223741705 + MER45A DNA AcHobo 78 176 -2 937 279 33 4 chr2 26946667 26946911 -223740943 + MIR SINE MIR 2 252 -10 216 283 43 33 chr2 26947531 26947623 -223740231 - L2 LINE L2 -545 2769 2677 297 164 164 0 chr2 26947921 26947982 -223739872 - MIR SINE MIR -74 188 118 191 170 64 85 chr2 26948451 26948498 -223739356 + MER5A DNA MER1_type 31 76 -113 213 344 11 11 chr2 26948521 26948611 -223739243 + MIR SINE MIR 11 100 -162 295 312 233 6 chr2 26948612 26948968 -223738886 - L2 LINE L2 -870 2444 2008 279 232 93 119 chr2 26950199 26950278 -223737576 - MIR SINE MIR -6 256 181 2898 131 26 49 chr2 26950278 26950812 -223737042 + L1MB3 LINE L1 5657 6178 -5 279 232 93 119 chr2 26950812 26950883 -223736971 - MIR SINE MIR -81 181 110 252 250 150 0 chr2 26951622 26951702 -223736152 + MIR SINE MIR 61 152 -110 2294 185 78 25 chr2 26952541 26953129 -223734725 + L1ME1 LINE L1 4664 5282 -864 930 129 8 0 chr2 26953130 26953262 -223734592 + AluSq/x SINE Alu 1 133 -180 647 223 69 19 chr2 26953291 26954006 -223733848 + L1ME1 LINE L1 5272 6154 -12 1977 129 20 27 chr2 26954101 26954395 -223733459 - AluJo SINE Alu -15 297 6 26 0 0 0 chr2 26954411 26954437 -223733417 + AT_rich Low_complexity Low_complexity 1 26 0 404 289 228 14 chr2 26955736 26955947 -223731907 - MIR SINE MIR -5 257 2 2378 113 3 0 chr2 26956471 26956782 -223731072 + AluSx SINE Alu 1 312 0 208 368 56 7 chr2 26956884 26957028 -223730826 + MIR SINE MIR 2 152 -110 198 0 0 0 chr2 26958107 26958129 -223729725 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 236 349 67 0 chr2 26958443 26958592 -223729262 - MIR SINE MIR -69 193 35 703 321 80 0 chr2 26959777 26960001 -223727853 - MIR SINE MIR -9 253 12 1700 108 0 0 chr2 26960343 26960556 -223727298 - AluSx SINE Alu -99 213 1 23 33 0 0 chr2 26960927 26960957 -223726897 + AT_rich Low_complexity Low_complexity 1 30 0 250 345 129 6 chr2 26961022 26961193 -223726661 - L2 LINE L2 -1275 2039 1848 2312 112 0 3 chr2 26961379 26961684 -223726170 + AluSq SINE Alu 3 306 -7 210 360 67 54 chr2 26962089 26962328 -223725526 - L2 LINE L2 -27 3245 3004 225 221 150 44 chr2 26962419 26962532 -223725322 - L2 LINE L2 -454 2860 2736 1976 193 87 60 chr2 26962733 26963366 -223724488 - L1MD2 LINE L1 -11 6348 5699 823 158 8 15 chr2 26963678 26963811 -223724043 - FLAM_A SINE Alu -1 132 1 1620 296 73 32 chr2 26964122 26964974 -223722880 + MER110-int LTR ERV1 151 3185 -3616 1163 243 23 40 chr2 26964975 26965386 -223722468 + MER34B LTR ERV1 4 464 -101 1926 168 0 10 chr2 26965386 26965696 -223722158 + AluJo SINE Alu 1 307 -5 1163 243 23 40 chr2 26965696 26965793 -223722061 + MER34B LTR ERV1 464 561 -4 2606 61 0 0 chr2 26965908 26966219 -223721635 - AluY SINE Alu 0 311 1 370 335 6 23 chr2 26966229 26966402 -223721452 + MER110-int LTR ERV1 3304 3473 -3328 396 189 151 82 chr2 26966603 26966762 -223721092 - L2 LINE L2 -787 2527 2358 271 237 252 14 chr2 26966763 26967085 -223720769 - L1ME LINE L1 -242 5879 5484 376 325 24 8 chr2 26967090 26967213 -223720641 - L1ME LINE L1 -656 5465 5341 429 141 165 12 chr2 26967463 26967548 -223720306 + AluJo SINE Alu 87 184 -128 189 194 65 129 chr2 26967918 26968011 -223719843 + MIR SINE MIR 57 143 -119 274 213 15 8 chr2 26968045 26968136 -223719718 + L1P LINE L1 5322 5411 -740 185 378 71 0 chr2 26968141 26968239 -223719615 + MIR SINE MIR 154 258 -4 762 263 99 28 chr2 26969602 26969925 -223717929 + L1ME4a LINE L1 5500 5845 -276 387 303 43 6 chr2 26970080 26970242 -223717612 + MLT1J LTR MaLR 342 509 -2 560 219 47 0 chr2 26970288 26970416 -223717438 + MER7A DNA MER2_type 1 132 -214 347 203 0 0 chr2 26970468 26970532 -223717322 - AluJ/FRAM SINE Alu -22 280 217 259 141 31 0 chr2 26970544 26970608 -223717246 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 800 214 0 14 chr2 26970612 26970757 -223717097 - FRAM SINE Alu -32 144 2 1531 131 17 0 chr2 26970760 26970996 -223716858 + MER7A DNA MER2_type 97 336 0 344 242 54 7 chr2 26971028 26971177 -223716677 + L1ME4a LINE L1 5965 6120 -1 207 265 31 41 chr2 26971592 26971690 -223716164 + CT-rich Low_complexity Low_complexity 4 100 0 2381 89 6 16 chr2 26972316 26972632 -223715222 + AluSp SINE Alu 1 313 0 233 297 126 34 chr2 26973138 26973313 -223714541 + L3 LINE CR1 730 920 -657 282 263 161 106 chr2 26973329 26973565 -223714289 + L2 LINE L2 3019 3267 -5 * 445 238 40 0 chr2 26973563 26973664 -223714190 - MIR SINE MIR -137 125 21 * 912 291 35 95 chr2 26973661 26974263 -223713591 + L3 LINE CR1 1011 1576 -1 1397 138 75 48 chr2 26974437 26974643 -223713211 + MER1B DNA MER1_type 1 217 -2495 1460 119 50 0 chr2 26974643 26974862 -223712992 + MER30 DNA MER1_type 1 230 0 1397 138 75 48 chr2 26974862 26974923 -223712931 + MER1B DNA MER1_type 217 275 -64 2206 86 65 0 chr2 26975739 26976029 -223711825 - AluSx SINE Alu -3 309 1 478 222 24 32 chr2 26977354 26977480 -223710374 - MIR SINE MIR -89 173 49 283 344 38 0 chr2 26980543 26980674 -223707180 - MIR SINE MIR -111 151 16 1371 146 15 131 chr2 26984656 26984992 -223702862 - AluJo SINE Alu -5 297 1 2247 93 0 3 chr2 26985364 26985664 -223702190 - AluSq SINE Alu -14 299 1 5191 149 60 30 chr2 26985666 26986107 -223701747 - L1MC2 LINE L1 -13 6331 5905 2206 115 0 0 chr2 26986107 26986412 -223701442 - AluSx SINE Alu -7 305 1 5191 149 60 30 chr2 26986412 26986967 -223700887 - L1MC2 LINE L1 -439 5905 5294 1378 178 85 24 chr2 26986967 26987260 -223700594 - AluJo SINE Alu -1 311 1 5191 149 60 30 chr2 26987260 26987354 -223700500 - L1MC2 LINE L1 -1050 5294 5204 2263 96 0 0 chr2 26987566 26987867 -223699987 - AluY SINE Alu -10 301 1 1702 132 64 10 chr2 26987944 26988239 -223699615 - AluSx SINE Alu -1 311 1 1801 164 0 7 chr2 26988239 26988543 -223699311 - AluJb SINE Alu -8 304 3 2831 206 24 72 chr2 26988551 26989082 -223698772 - L1 LINE L1 -1773 4373 3903 2207 93 23 0 chr2 26989082 26989382 -223698472 - AluSx SINE Alu -5 307 1 2831 206 24 72 chr2 26989382 26989767 -223698087 - L1 LINE L1 -2243 3903 3501 2163 92 10 0 chr2 26989767 26990070 -223697784 - AluSx SINE Alu -6 306 1 842 110 12 61 chr2 26990070 26990233 -223697621 - AluSg/x SINE Alu -22 290 136 1990 87 30 10 chr2 26990235 26990534 -223697320 - AluSq SINE Alu -8 305 1 182 261 15 31 chr2 26990722 26990787 -223697067 - MIR SINE MIR -111 97 34 555 11 0 178 chr2 26991918 26992008 -223695846 + tRNA-Tyr-TAC tRNA tRNA 1 74 -2 555 55 14 0 chr2 26992351 26992424 -223695430 + tRNA-Ala-GCA tRNA tRNA 1 74 -2 208 143 48 63 chr2 26992960 26993023 -223694831 + (CCCCAG)n Simple_repeat Simple_repeat 3 64 0 1301 89 0 0 chr2 26996723 26996892 -223690962 + AluSp SINE Alu 135 303 -10 1918 102 4 8 chr2 26997669 26997933 -223689921 + AluSx SINE Alu 1 263 -49 2099 131 0 0 chr2 26999708 27000006 -223687848 + AluSx SINE Alu 1 298 -14 270 333 121 6 chr2 27000659 27000824 -223687030 - MIR SINE MIR 0 262 79 2028 137 3 13 chr2 27000892 27001072 -223686782 - AluSx SINE Alu 0 312 135 2339 82 3 0 chr2 27001072 27001375 -223686479 - AluSg SINE Alu -6 304 1 2028 137 3 13 chr2 27001375 27001509 -223686345 - AluSx SINE Alu -177 135 1 2022 125 7 7 chr2 27001655 27001952 -223685902 - AluSq SINE Alu -12 301 5 2246 92 3 10 chr2 27001961 27002267 -223685587 - AluSp SINE Alu -9 304 1 283 296 0 0 chr2 27003045 27003116 -223684738 + L2 LINE L2 3242 3312 -1 2434 53 0 10 chr2 27003152 27003454 -223684400 + AluY SINE Alu 1 299 -12 1678 137 50 20 chr2 27004130 27004429 -223683425 - AluJb SINE Alu -3 309 2 2183 83 13 3 chr2 27004594 27004895 -223682959 - AluSx SINE Alu -8 304 1 234 330 43 26 chr2 27005318 27005433 -223682421 - L2 LINE L2 -15 3257 3141 251 232 244 0 chr2 27005433 27005515 -223682339 - MIR SINE MIR -1 261 160 1628 148 94 0 chr2 27005819 27006096 -223681758 + AluJb SINE Alu 1 303 -9 1762 139 16 29 chr2 27006504 27006640 -223681214 + AluJb SINE Alu 1 137 -175 2182 92 3 13 chr2 27006640 27006944 -223680910 + AluSg SINE Alu 1 301 -9 1762 139 16 29 chr2 27006944 27007116 -223680738 + AluJb SINE Alu 137 305 -7 302 208 125 0 chr2 27007662 27007734 -223680120 - MIR SINE MIR 0 262 182 1094 179 14 19 chr2 27008195 27008407 -223679447 + MER20 DNA MER1_type 9 219 0 289 270 147 37 chr2 27013152 27013216 -223674638 - MIR3 SINE MIR -4 204 148 2118 119 20 0 chr2 27013216 27013518 -223674336 + AluSx SINE Alu 1 308 -4 289 270 147 37 chr2 27013518 27013616 -223674238 - MIR3 SINE MIR -60 148 24 2191 107 3 0 chr2 27014206 27014505 -223673349 - AluSx SINE Alu -12 300 1 206 178 0 44 chr2 27014809 27014854 -223673000 + (CCA)n Simple_repeat Simple_repeat 3 45 0 938 108 20 7 chr2 27015446 27015458 -223672396 - AluSq/x SINE Alu -163 150 140 1923 128 14 0 chr2 27015458 27015748 -223672106 - AluSx SINE Alu -18 294 1 938 108 20 7 chr2 27015748 27015883 -223671971 - AluSq/x SINE Alu -173 140 1 202 288 27 27 chr2 27016073 27016184 -223671670 + L2 LINE L2 2305 2415 -899 623 239 42 7 chr2 27016601 27016743 -223671111 - MIR SINE MIR 0 262 116 2296 90 0 0 chr2 27017496 27017796 -223670058 - AluSg SINE Alu -10 300 1 461 304 8 0 chr2 27017930 27018055 -223669799 + MIR3 SINE MIR 60 185 -23 241 200 0 67 chr2 27018660 27018735 -223669119 + GA-rich Low_complexity Low_complexity 5 74 0 426 53 0 0 chr2 27020949 27021006 -223666848 + (TG)n Simple_repeat Simple_repeat 1 57 0 209 284 81 0 chr2 27021474 27021548 -223666306 - MIR SINE MIR -80 182 103 397 317 19 37 chr2 27021568 27021729 -223666125 + MIR SINE MIR 20 177 -85 186 43 0 0 chr2 27022237 27022260 -223665594 + (CCCCAG)n Simple_repeat Simple_repeat 6 28 0 474 214 95 8 chr2 27025307 27025433 -223662421 - L2 LINE L2 0 3272 3136 279 0 0 0 chr2 27026561 27026592 -223661262 + (CGGGG)n Simple_repeat Simple_repeat 5 35 0 225 250 94 0 chr2 27027469 27027533 -223660321 - MIR SINE MIR -115 147 78 249 33 0 0 chr2 27027936 27027966 -223659888 + (T)n Simple_repeat Simple_repeat 1 30 0 348 24 0 0 chr2 27028764 27028805 -223659049 + (CA)n Simple_repeat Simple_repeat 1 41 0 2291 73 7 0 chr2 27029266 27029566 -223658288 + AluY SINE Alu 1 302 -9 367 246 82 18 chr2 27029601 27029711 -223658143 - MIR SINE MIR -44 218 102 180 111 0 0 chr2 27030685 27030712 -223657142 + (TG)n Simple_repeat Simple_repeat 2 28 0 2297 84 3 10 chr2 27031657 27031966 -223655888 + AluSp SINE Alu 1 307 -6 459 107 14 8 chr2 27032459 27032675 -223655179 + AluJo SINE Alu 1 298 -14 692 248 0 0 chr2 27032946 27033079 -223654775 - MER94 DNA DNA 0 134 2 2217 97 3 13 chr2 27033617 27033928 -223653926 - AluSg SINE Alu -2 308 1 1820 164 23 0 chr2 27034136 27034441 -223653413 - AluJb SINE Alu 0 312 1 2733 169 44 4 chr2 27034719 27035245 -223652609 - L1MC3 LINE L1 0 7785 7239 2071 131 0 7 chr2 27035430 27035736 -223652118 + AluSx SINE Alu 1 304 -8 234 156 0 0 chr2 27035869 27035914 -223651940 + (CA)n Simple_repeat Simple_repeat 2 46 0 351 217 0 33 chr2 27036052 27036144 -223651710 - AluY SINE Alu -212 89 1 675 260 58 42 chr2 27036263 27036678 -223651176 + MLT1F1 LTR MaLR 1 418 -172 707 196 8 15 chr2 27036751 27036884 -223650970 - FLAM_C SINE Alu -10 133 2 287 186 17 0 chr2 27036887 27036946 -223650908 + MLT1F1 LTR MaLR 534 593 -2 732 181 188 0 chr2 27036959 27037108 -223650746 + MER45A DNA AcHobo 2 178 0 495 301 47 10 chr2 27037178 27037371 -223650483 + MIR SINE MIR 2 201 -61 217 376 93 28 chr2 27037369 27037723 -223650131 + L2 LINE L2 2595 2971 -343 * 1510 172 20 50 chr2 27037782 27038079 -223649775 + AluJo SINE Alu 1 288 -14 2285 78 14 0 chr2 27039339 27039634 -223648220 + AluSp SINE Alu 1 299 -14 2243 96 0 3 chr2 27040098 27040400 -223647454 + AluSx SINE Alu 1 301 -11 611 269 71 55 chr2 27040442 27040680 -223647174 + MIR SINE MIR 11 252 -10 261 303 26 0 chr2 27040720 27040796 -223647058 + MIR SINE MIR 64 141 -121 2163 73 0 43 chr2 27041299 27041600 -223646254 + AluY SINE Alu 1 288 -23 243 0 0 0 chr2 27041716 27041743 -223646111 + (T)n Simple_repeat Simple_repeat 1 27 0 2351 45 10 0 chr2 27041754 27042044 -223645810 + AluY SINE Alu 2 294 -17 1660 59 5 0 chr2 27042149 27042353 -223645501 + AluSc SINE Alu 98 302 -7 523 286 146 21 chr2 27042563 27042755 -223645099 - MIR SINE MIR -25 237 22 195 283 0 0 chr2 27042898 27042951 -223644903 + L2 LINE L2 3257 3309 -4 279 317 106 15 chr2 27043583 27043848 -223644006 - L1ME LINE L1 -302 6213 5925 281 277 42 8 chr2 27043857 27043976 -223643878 - L1ME LINE L1 -2651 3889 3767 1662 153 3 24 chr2 27044039 27044326 -223643528 - AluJo SINE Alu -1 311 31 3070 112 130 131 chr2 27044326 27045650 -223642204 + pTR5 LTR ERV1 743 2438 0 465 279 109 59 chr2 27045688 27045932 -223641922 - L1MDa LINE L1 -2743 3797 3567 1386 164 15 134 chr2 27045932 27046261 -223641593 - AluJb SINE Alu -12 290 1 465 279 109 59 chr2 27046261 27046445 -223641409 - L1MDa LINE L1 -2973 3567 2345 474 262 95 8 chr2 27047183 27047309 -223640545 + MER5B DNA MER1_type 2 138 -40 638 294 233 9 chr2 27047404 27047931 -223639923 - L2 LINE L2 -343 2971 2327 328 151 0 0 chr2 27047949 27048002 -223639852 + MER74B LTR ERVL 1 53 -569 1113 243 111 19 chr2 27048035 27048405 -223639449 + MER74B LTR ERVL 209 612 -10 270 185 37 0 chr2 27048489 27048543 -223639311 - MLT1C LTR MaLR 0 467 412 1641 129 73 35 chr2 27048543 27048829 -223639025 + MER1B DNA MER1_type 1 297 -42 875 104 7 22 chr2 27048834 27048969 -223638885 + AluSq/x SINE Alu 1 133 -180 379 115 0 0 chr2 27048993 27049045 -223638809 + MER1B DNA MER1_type 275 326 -3 * 2338 183 5 20 chr2 27049045 27049251 -223638603 - MLT1C LTR MaLR -53 414 217 1650 161 45 87 chr2 27049251 27049555 -223638299 - MLT1A1 LTR MaLR -2 363 77 1798 147 13 20 chr2 27049555 27049855 -223637999 - AluJo SINE Alu -14 298 1 1650 161 45 87 chr2 27049855 27049929 -223637925 - MLT1A1 LTR MaLR -288 77 1 2338 183 5 20 chr2 27049929 27050143 -223637711 - MLT1C LTR MaLR -250 217 1 2118 73 0 24 chr2 27050508 27050826 -223637028 - AluY SINE Alu 0 311 1 282 337 0 0 chr2 27051066 27051161 -223636693 + (CA)n Simple_repeat Simple_repeat 2 96 0 210 271 0 0 chr2 27051176 27051272 -223636582 + (CACG)n Simple_repeat Simple_repeat 4 99 0 21 71 0 0 chr2 27051273 27051315 -223636539 + GC_rich Low_complexity Low_complexity 1 42 0 487 293 91 16 chr2 27052009 27052251 -223635603 + L3 LINE CR1 1312 1571 -6 445 246 109 62 chr2 27052259 27052364 -223635490 - MIR SINE MIR -21 241 142 2314 58 0 32 chr2 27052364 27052676 -223635178 + AluY SINE Alu 1 302 -9 445 246 109 62 chr2 27052676 27052781 -223635073 - MIR SINE MIR -120 142 21 1993 127 7 0 chr2 27053171 27053455 -223634399 + AluSx SINE Alu 1 286 -26 495 0 0 0 chr2 27053455 27053510 -223634344 + (GA)n Simple_repeat Simple_repeat 2 56 0 2143 115 0 0 chr2 27053513 27053817 -223634037 + AluSx SINE Alu 1 304 -8 796 310 85 53 chr2 27053826 27054150 -223633704 - L1MEd LINE L1 -5292 827 515 2001 120 0 19 chr2 27054150 27054459 -223633395 + AluSx SINE Alu 1 303 -9 796 310 85 53 chr2 27054459 27055126 -223632728 - L1MEd LINE L1 -5604 515 1 2295 98 0 0 chr2 27055221 27055527 -223632327 + AluSx SINE Alu 1 306 -6 181 265 82 0 chr2 27056926 27056975 -223630879 + L2 LINE L2 3211 3263 -9 2167 92 0 0 chr2 27057059 27057363 -223630491 - AluSg SINE Alu 0 304 1 207 100 0 0 chr2 27057601 27057631 -223630223 + (T)n Simple_repeat Simple_repeat 1 30 0 1715 172 10 3 chr2 27057965 27058262 -223629592 - AluJo SINE Alu -13 299 1 1853 140 3 35 chr2 27058264 27058578 -223629276 - AluSx SINE Alu -8 304 1 248 325 62 72 chr2 27058851 27059045 -223628809 - MIR SINE MIR -50 212 21 2259 88 3 0 chr2 27059708 27060005 -223627849 - AluSp SINE Alu -15 298 1 2334 97 0 0 chr2 27060296 27060606 -223627248 - AluSg SINE Alu 0 310 1 1746 172 7 7 chr2 27060625 27060922 -223626932 + AluJo SINE Alu 1 297 -15 1537 170 21 28 chr2 27060954 27061242 -223626612 - AluJb SINE Alu -26 286 1 187 326 76 11 chr2 27062754 27062846 -223625008 - MIR SINE MIR -83 125 28 245 224 0 0 chr2 27063307 27063356 -223624498 - L2 LINE L2 -3 3269 3221 363 168 7 168 chr2 27066740 27066877 -223620977 - MIR3 SINE MIR -32 176 62 259 319 76 60 chr2 27067045 27067230 -223620624 + MIR3 SINE MIR 19 206 -2 249 231 51 39 chr2 27067801 27067879 -223619975 + MIR3 SINE MIR 106 184 -24 190 111 0 0 chr2 27068052 27068079 -223619775 + MER5B DNA MER1_type 6 32 -146 983 219 27 9 chr2 27068091 27068310 -223619544 + AluJo SINE Alu 1 223 -89 484 144 18 90 chr2 27068311 27068422 -223619432 + AluJo SINE Alu 105 207 -105 635 191 76 8 chr2 27068769 27068900 -223618954 + FLAM_C SINE Alu 2 141 -2 519 299 86 23 chr2 27070422 27070643 -223617211 + MIR SINE MIR 28 262 0 1224 92 6 0 chr2 27073229 27073392 -223614462 - AluSg/x SINE Alu -17 295 132 1712 100 0 0 chr2 27073505 27073736 -223614118 - AluSc SINE Alu -78 231 1 945 127 14 0 chr2 27073847 27073989 -223613865 - FRAM SINE Alu -32 144 1 264 184 58 68 chr2 27079728 27079831 -223608023 - MIR SINE MIR -70 192 91 22 0 0 0 chr2 27080672 27080694 -223607160 + GC_rich Low_complexity Low_complexity 1 22 0 1860 61 65 47 chr2 27080747 27081025 -223606829 + AluSp SINE Alu 14 296 -17 1225 161 27 65 chr2 27081031 27081323 -223606531 + AluJb SINE Alu 2 282 -30 191 118 59 0 chr2 27081410 27081444 -223606410 - MIR SINE MIR -90 118 83 2094 113 0 3 chr2 27082036 27082329 -223605525 - AluSx SINE Alu -15 297 6 1781 145 17 24 chr2 27082335 27082631 -223605223 - AluJo SINE Alu -8 304 11 244 261 0 78 chr2 27083756 27083898 -223603956 + G-rich Low_complexity Low_complexity 5 135 0 210 261 14 29 chr2 27084710 27084779 -223603075 + GA-rich Low_complexity Low_complexity 4 71 0 4363 166 27 1 chr2 27085637 27086053 -223601801 - L1MB7 LINE L1 -9 6175 5771 2346 119 0 0 chr2 27086053 27086363 -223601491 - AluSx SINE Alu -1 311 2 4363 166 27 1 chr2 27086363 27086785 -223601069 - L1MB7 LINE L1 -413 5771 5315 340 83 0 0 chr2 27086785 27086833 -223601021 - HY4 scRNA scRNA 0 93 46 2428 64 0 27 chr2 27086834 27087131 -223600723 - AluSg SINE Alu -21 289 1 2094 156 0 6 chr2 27087147 27087461 -223600393 - AluJb SINE Alu 0 312 1 1071 94 0 0 chr2 27087479 27087617 -223600237 - AluSg/x SINE Alu -11 299 162 3385 75 30 136 chr2 27087617 27087685 -223600169 + MER4A LTR ERV1 65 139 -525 2195 107 0 23 chr2 27087685 27087985 -223599869 + AluSx SINE Alu 1 293 -19 3385 75 30 136 chr2 27087985 27088307 -223599547 + MER4A LTR ERV1 139 357 -307 1723 158 54 0 chr2 27088307 27088585 -223599269 + AluJb SINE Alu 1 293 -19 3385 75 30 136 chr2 27088585 27088863 -223598991 + MER4A LTR ERV1 357 663 -1 4749 210 36 41 chr2 27088869 27089216 -223598638 - L1M4 LINE L1 -2154 3992 3645 1745 215 31 49 chr2 27089216 27089667 -223598187 + LTR47B LTR ERVL 1 443 0 4749 210 36 41 chr2 27089667 27090111 -223597743 - L1M4 LINE L1 -2501 3645 3200 2376 98 0 0 chr2 27090111 27090443 -223597411 - AluSq SINE Alu 0 313 1 4749 210 36 41 chr2 27090443 27090588 -223597266 - L1M4 LINE L1 -2946 3200 3056 2404 92 0 16 chr2 27090588 27090905 -223596949 - AluSq SINE Alu -1 312 1 4749 210 36 41 chr2 27090905 27091200 -223596654 - L1M4 LINE L1 -3090 3056 2764 2379 89 3 0 chr2 27091200 27091502 -223596352 - AluSp SINE Alu -4 309 7 4749 210 36 41 chr2 27091502 27091693 -223596161 - L1M4 LINE L1 -3382 2764 2574 914 157 0 44 chr2 27091718 27091877 -223595977 - FRAM SINE Alu -28 148 1 1901 177 29 26 chr2 27091947 27092331 -223595523 - MLT1F LTR MaLR -3 539 155 748 198 108 0 chr2 27092332 27092489 -223595365 - FAM SINE Alu 0 175 2 2348 95 7 0 chr2 27092502 27092808 -223595046 - AluSq SINE Alu -5 308 1 452 285 47 24 chr2 27092863 27093090 -223594764 - L1ME4a LINE L1 -187 5934 5729 314 89 0 36 chr2 27093106 27093146 -223594708 + (TTCC)n Simple_repeat Simple_repeat 3 42 -14 2232 99 0 7 chr2 27093146 27093439 -223594415 - AluY SINE Alu -20 291 1 314 89 0 36 chr2 27093439 27093454 -223594400 + (TTCC)n Simple_repeat Simple_repeat 42 56 0 2418 69 13 7 chr2 27093462 27093768 -223594086 - AluSc SINE Alu -1 308 1 201 291 139 12 chr2 27094012 27094079 -223593775 - L2 LINE L2 -89 3183 3106 537 291 128 18 chr2 27094079 27094306 -223593548 + MIR SINE MIR 2 253 -9 369 286 16 32 chr2 27095455 27095581 -223592273 - MIR3 SINE MIR -76 132 9 261 244 215 30 chr2 27095723 27095858 -223591996 + MIR3 SINE MIR 3 162 -46 439 249 259 10 chr2 27096874 27097075 -223590779 - MIR SINE MIR 0 262 12 28 0 0 0 chr2 27097181 27097209 -223590645 + AT_rich Low_complexity Low_complexity 1 28 0 2212 113 3 0 chr2 27097215 27097506 -223590348 - AluSx SINE Alu -20 292 1 1307 165 24 20 chr2 27097507 27097761 -223590093 - AluJo SINE Alu -9 303 49 341 21 0 21 chr2 27099377 27099424 -223588430 + (TTTTC)n Simple_repeat Simple_repeat 2 47 0 867 124 0 8 chr2 27099426 27099547 -223588307 - FLAM_C SINE Alu -23 120 1 2340 112 0 6 chr2 27101331 27101643 -223586211 + AluSg SINE Alu 1 310 0 1145 112 28 17 chr2 27101915 27102093 -223585761 + AluSx SINE Alu 1 180 -132 2507 55 0 29 chr2 27102264 27102574 -223585280 - AluY SINE Alu -10 301 1 1057 207 58 0 chr2 27102782 27102990 -223584864 + MER58A DNA MER1_type 5 224 0 351 233 23 0 chr2 27102998 27103084 -223584770 + Charlie1b DNA MER1_type 1 88 -435 1856 161 17 0 chr2 27103096 27103388 -223584466 + AluSx SINE Alu 1 297 -15 2198 126 3 7 chr2 27103391 27103700 -223584154 + AluSx SINE Alu 5 312 0 762 183 12 67 chr2 27103700 27103887 -223583967 + AluJb SINE Alu 134 312 0 1574 160 52 30 chr2 27103897 27104297 -223583557 + Charlie1b DNA MER1_type 110 518 -5 2695 115 0 0 chr2 27106043 27106418 -223581436 - THE1C LTR MaLR 0 375 1 2233 99 10 13 chr2 27106502 27106672 -223581182 - AluSq SINE Alu -10 303 133 1882 123 51 27 chr2 27106672 27106965 -223580889 - AluSq SINE Alu -13 300 1 2233 99 10 13 chr2 27106965 27107098 -223580756 - AluSq SINE Alu -180 133 1 693 163 37 52 chr2 27107111 27107246 -223580608 - FLAM_A SINE Alu 0 133 1 1917 146 3 22 chr2 27107687 27108003 -223579851 - AluJb SINE Alu -2 310 1 778 57 9 9 chr2 27108033 27108139 -223579715 - LTR23 LTR ERV1 -12 425 320 392 206 21 10 chr2 27108123 27108220 -223579634 + LTR23 LTR ERV1 340 437 0 * 492 306 70 55 chr2 27108605 27108948 -223578906 + MER4B-int LTR ERV1 346 693 -6065 3233 76 9 38 chr2 27108995 27109094 -223578760 + MER57B LTR ERV1 2 102 -332 2247 124 0 0 chr2 27109094 27109385 -223578469 + AluSx SINE Alu 8 298 -14 3233 76 9 38 chr2 27109385 27109731 -223578123 + MER57B LTR ERV1 102 434 0 398 209 0 12 chr2 27109989 27110075 -223577779 + MER4B-int LTR ERV1 1557 1641 -4690 642 140 0 0 chr2 27110078 27110185 -223577669 + MER72 LTR ERV1 1 107 -615 2876 99 59 60 chr2 27110185 27110350 -223577504 - MER4B LTR ERV1 0 779 615 2480 69 3 3 chr2 27110350 27110653 -223577201 + AluY SINE Alu 1 303 -8 2876 99 59 60 chr2 27110653 27111093 -223576761 - MER4B LTR ERV1 -164 615 1 755 153 0 15 chr2 27111094 27111231 -223576623 + MER4D LTR ERV1 105 239 -664 982 234 43 67 chr2 27111333 27111679 -223576175 + LTR10B LTR ERV1 210 547 0 21 36 0 0 chr2 27111723 27111751 -223576103 + AT_rich Low_complexity Low_complexity 1 28 0 3374 165 12 48 chr2 27111873 27112200 -223575654 + MER4D LTR ERV1 238 529 -374 2037 149 0 13 chr2 27112200 27112509 -223575345 - AluSx SINE Alu -1 311 7 3374 165 12 48 chr2 27112509 27112864 -223574990 + MER4D LTR ERV1 529 895 -8 913 158 45 25 chr2 27112910 27113112 -223574742 + LTR49-int LTR ERV1 1670 1875 -4456 1010 69 35 0 chr2 27113118 27113263 -223574591 + LTR56 LTR ERV1 188 337 -108 707 286 48 22 chr2 27113281 27113637 -223574217 + L1ME LINE L1 8 372 -5747 630 292 43 78 chr2 27113664 27113748 -223574106 + L1ME LINE L1 561 646 -5473 1925 177 0 0 chr2 27113748 27114053 -223573801 + AluJb SINE Alu 1 305 -7 630 292 43 78 chr2 27114053 27114414 -223573440 + L1ME LINE L1 646 986 -5133 2192 132 0 6 chr2 27114414 27114725 -223573129 + AluSx SINE Alu 3 311 -1 630 292 43 78 chr2 27114725 27114816 -223573038 + L1ME LINE L1 986 1079 -5040 * 696 255 28 47 chr2 27114800 27115122 -223572732 + L1ME LINE L1 5007 5322 -807 1003 165 0 17 chr2 27115128 27115304 -223572550 - FRAM SINE Alu -3 173 1 479 186 137 0 chr2 27115304 27115428 -223572426 + L1ME LINE L1 5317 5457 -690 2537 65 0 7 chr2 27115464 27115770 -223572084 + AluSx SINE Alu 1 304 -8 289 258 0 0 chr2 27115770 27115824 -223572030 + L1ME LINE L1 5662 5718 -435 587 203 84 0 chr2 27115839 27115982 -223571872 + LTR50 LTR ERVL 59 213 -582 376 254 42 34 chr2 27116034 27116076 -223571778 + LTR50 LTR ERVL 326 366 -429 2130 133 0 0 chr2 27116076 27116377 -223571477 + AluSx SINE Alu 1 301 -11 376 254 42 34 chr2 27116377 27116510 -223571344 + LTR50 LTR ERVL 366 585 -210 391 121 30 0 chr2 27116592 27116658 -223571196 + LTR50 LTR ERVL 728 795 0 1111 129 12 6 chr2 27116727 27116890 -223570964 - FRAM SINE Alu -1 165 2 1792 143 43 7 chr2 27117204 27117483 -223570371 - AluJo SINE Alu -9 303 15 838 164 217 5 chr2 27117561 27117768 -223570086 + AluJo SINE Alu 48 298 -14 418 307 53 22 chr2 27117768 27118126 -223569728 - L1MEc LINE L1 -4746 1650 1282 776 157 31 13 chr2 27118589 27118748 -223569106 + AluSc SINE Alu 140 301 -8 247 274 0 0 chr2 27118749 27118800 -223569054 + L1ME LINE L1 5685 5735 -435 587 203 84 0 chr2 27118815 27118958 -223568896 + LTR50 LTR ERVL 59 213 -582 376 260 42 34 chr2 27119010 27119052 -223568802 + LTR50 LTR ERVL 326 366 -429 2130 133 0 0 chr2 27119052 27119353 -223568501 + AluSx SINE Alu 1 301 -11 376 260 42 34 chr2 27119353 27119486 -223568368 + LTR50 LTR ERVL 366 585 -210 391 121 30 0 chr2 27119568 27119634 -223568220 + LTR50 LTR ERVL 728 795 0 1111 129 12 6 chr2 27119703 27119866 -223567988 - FRAM SINE Alu -1 165 2 1710 158 47 30 chr2 27120183 27120481 -223567373 - AluJb SINE Alu -9 303 1 2141 117 0 39 chr2 27121528 27121837 -223566017 + AluSg SINE Alu 1 297 -13 2417 298 67 62 chr2 27122717 27124260 -223563594 + L2 LINE L2 443 1994 -1320 741 179 0 36 chr2 27124262 27124402 -223563452 - FRAM SINE Alu 0 40 1 2366 97 3 0 chr2 27124494 27124802 -223563052 - AluSp SINE Alu -4 309 1 771 222 54 52 chr2 27124853 27125132 -223562722 + L1MC/D LINE L1 5174 5458 -834 1945 149 0 3 chr2 27125132 27125449 -223562405 + AluSx SINE Alu 1 316 0 771 222 54 52 chr2 27125449 27125530 -223562324 + L1MC/D LINE L1 5458 5537 -755 351 0 0 0 chr2 27125638 27125677 -223562177 + (CA)n Simple_repeat Simple_repeat 2 40 0 1116 135 0 18 chr2 27125746 27125909 -223561945 - FRAM SINE Alu -8 168 9 2319 122 0 3 chr2 27125987 27126298 -223561556 - AluSx SINE Alu -2 310 1 1798 143 10 51 chr2 27126300 27126614 -223561240 - AluJb SINE Alu -11 301 1 524 264 83 61 chr2 27126987 27127294 -223560560 - MLT1L LTR MaLR -4 611 213 1882 166 7 10 chr2 27127387 27127695 -223560159 - AluJo SINE Alu -5 307 1 2466 206 6 61 chr2 27127695 27128223 -223559631 - L1M4 LINE L1 -1867 4279 3792 191 61 30 0 chr2 27128223 27128256 -223559598 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2466 206 6 61 chr2 27128256 27128382 -223559472 - L1M4 LINE L1 -2354 3792 3661 975 169 226 24 chr2 27128526 27128774 -223559080 - AluY SINE Alu 0 311 14 2241 113 10 0 chr2 27129140 27129441 -223558413 + AluSq SINE Alu 1 304 -9 2239 125 0 0 chr2 27130013 27130316 -223557538 - AluSx SINE Alu -9 303 1 1885 156 18 0 chr2 27130543 27130825 -223557029 + AluSx SINE Alu 3 289 -23 344 276 62 21 chr2 27131160 27131305 -223556549 + L1ME LINE L1 334 484 -5586 370 286 45 62 chr2 27131312 27131490 -223556364 + L1ME LINE L1 383 557 -5513 1576 170 3 35 chr2 27131520 27131831 -223556023 + AluJo SINE Alu 12 312 0 269 202 117 91 chr2 27131905 27132067 -223555787 + L1ME LINE L1 606 772 -5308 617 161 21 0 chr2 27132067 27132190 -223555664 + MSTD LTR MaLR 69 193 -203 2190 116 7 7 chr2 27132190 27132492 -223555362 + AluSx SINE Alu 1 302 -10 949 165 5 48 chr2 27132565 27132753 -223555101 + MSTD LTR MaLR 217 396 0 387 192 77 90 chr2 27132753 27132909 -223554945 - HAL1 LINE L1 -2332 175 22 198 0 0 0 chr2 27133824 27133846 -223554008 + (CA)n Simple_repeat Simple_repeat 2 23 0 447 70 14 14 chr2 27133933 27134004 -223553850 + MER53 DNA DNA 1 71 -118 835 256 68 30 chr2 27134009 27134275 -223553579 + MLT1L LTR MaLR 119 394 -221 452 259 50 0 chr2 27134312 27134451 -223553403 + MLT1L LTR MaLR 466 611 -4 2201 112 3 13 chr2 27135008 27135313 -223552541 - AluSq SINE Alu -11 302 1 317 269 34 25 chr2 27135547 27135666 -223552188 - L1MC4a LINE L1 -1945 5863 5744 614 293 76 50 chr2 27136197 27136361 -223551493 - L1MC4a LINE L1 -2057 5751 5593 2321 121 0 0 chr2 27136361 27136666 -223551188 + AluSx SINE Alu 1 305 -7 614 293 76 50 chr2 27136666 27136986 -223550868 - L1MC4a LINE L1 -2215 5593 5254 863 162 0 108 chr2 27137070 27137255 -223550599 + AluSg/x SINE Alu 135 299 -11 2255 95 10 13 chr2 27137296 27137600 -223550254 + AluSp SINE Alu 1 303 -10 781 251 15 10 chr2 27137685 27137884 -223549970 + L1MB8 LINE L1 4803 5002 -1144 1621 175 8 0 chr2 27137885 27138131 -223549723 + AluJb SINE Alu 50 297 -15 2475 86 0 0 chr2 27138132 27138433 -223549421 + AluSg SINE Alu 1 301 -9 294 242 30 0 chr2 27138434 27138500 -223549354 + L1MC2 LINE L1 6223 6290 -54 207 0 0 0 chr2 27138502 27138525 -223549329 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 888 144 95 10 chr2 27138554 27138662 -223549192 + L1MB8 LINE L1 5417 5514 -664 2221 75 14 3 chr2 27138662 27138971 -223548883 - AluSx SINE Alu 0 312 1 888 144 95 10 chr2 27138971 27139142 -223548712 + L1MB8 LINE L1 5514 5965 -213 671 204 133 11 chr2 27139149 27139330 -223548524 + L1MC/D LINE L1 746 948 -5592 367 224 60 60 chr2 27139854 27139988 -223547866 + L1MC/D LINE L1 4960 5093 -1447 335 300 60 69 chr2 27140038 27140271 -223547583 + L1MC/D LINE L1 5207 5437 -1103 2572 59 3 7 chr2 27140353 27140660 -223547194 + AluY SINE Alu 1 306 -5 1271 109 0 0 chr2 27140660 27140825 -223547029 + AluSg/x SINE Alu 132 296 -14 378 309 88 60 chr2 27140946 27141163 -223546691 + L1MC/D LINE L1 5649 5871 -2331 248 323 15 0 chr2 27141177 27141307 -223546547 - L1M4 LINE L1 -3173 2973 2842 1762 167 0 37 chr2 27141319 27141618 -223546236 + AluJb SINE Alu 1 288 -24 549 44 0 0 chr2 27141618 27141686 -223546168 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 2385 94 0 0 chr2 27141963 27142260 -223545594 - AluY SINE Alu -14 297 1 262 213 64 11 chr2 27142268 27142362 -223545492 - L1MC4a LINE L1 -1857 5951 5853 1767 91 0 0 chr2 27142471 27142690 -223545164 + AluSq SINE Alu 1 219 -94 580 165 8 33 chr2 27142690 27142811 -223545043 + AluSp/q SINE Alu 188 305 -8 287 296 148 6 chr2 27142976 27143138 -223544716 - L1ME3A LINE L1 -208 5962 5778 207 88 0 0 chr2 27143175 27143209 -223544645 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 1049 158 224 70 chr2 27143211 27143452 -223544402 - AluJb SINE Alu -34 278 1 401 265 0 0 chr2 27143502 27143585 -223544269 + Charlie1a DNA MER1_type 1 83 -1372 1405 44 0 11 chr2 27143589 27143770 -223544084 - L1PA3 LINE L1 0 6155 5977 1772 5 0 0 chr2 27143770 27143975 -223543879 + L1PA3 LINE L1 5656 5860 -295 650 184 6 54 chr2 27143975 27144143 -223543711 + Charlie1a DNA MER1_type 72 231 -1224 626 184 0 40 chr2 27144191 27144316 -223543538 + AluSg/x SINE Alu 178 297 -13 455 161 0 35 chr2 27144317 27144404 -223543450 - MER112 DNA MER1_type -176 84 1 2342 75 48 3 chr2 27145191 27145484 -223542370 + AluSg1 SINE Alu 1 306 -3 1609 170 23 0 chr2 27146153 27146418 -223541436 - AluJo SINE Alu -5 307 37 2265 114 7 7 chr2 27150196 27150503 -223537351 + AluSx SINE Alu 1 307 -5 217 314 46 26 chr2 27152019 27152158 -223535696 + MIR3 SINE MIR 21 162 -46 235 288 151 0 chr2 27152285 27152358 -223535496 - L3 LINE CR1 -2 1575 1492 1369 59 10 49 chr2 27153525 27153728 -223534126 - MER107 DNA MER1_type -2 195 1 200 305 12 12 chr2 27153895 27153977 -223533877 + CT-rich Low_complexity Low_complexity 4 85 0 384 325 16 0 chr2 27157074 27157200 -223530654 - MIR3 SINE MIR -66 142 15 308 258 65 102 chr2 27157304 27157490 -223530364 - MIR SINE MIR -4 258 80 1817 100 0 54 chr2 27158413 27158672 -223529182 - AluSg SINE Alu -20 290 46 2582 30 0 7 chr2 27158726 27159021 -223528833 + AluY SINE Alu 17 309 -2 27 62 0 0 chr2 27159916 27159964 -223527890 + GC_rich Low_complexity Low_complexity 1 48 0 830 99 0 25 chr2 27161892 27162013 -223525841 - AluSp/q SINE Alu -3 310 193 202 308 142 25 chr2 27162141 27162261 -223525593 + L2 LINE L2 3139 3272 0 545 200 35 83 chr2 27162490 27162534 -223525320 + MER3 DNA MER1_type 1 46 -116 2395 86 7 0 chr2 27162534 27162824 -223525030 + AluSg SINE Alu 1 292 -18 545 200 35 83 chr2 27162824 27162924 -223524930 + MER3 DNA MER1_type 46 138 -71 731 159 38 15 chr2 27162928 27163060 -223524794 - AluJb SINE Alu -176 136 2 307 190 0 0 chr2 27163069 27163127 -223524727 + MER3 DNA MER1_type 152 209 0 1301 164 78 108 chr2 27163876 27164338 -223523516 - LTR7 LTR ERV1 -2 448 1 1289 178 0 14 chr2 27167298 27167517 -223520337 - AluJb SINE Alu -13 299 84 2204 115 10 0 chr2 27167538 27167843 -223520011 - AluSp SINE Alu -5 308 1 237 285 113 38 chr2 27167933 27168119 -223519735 + L2 LINE L2 3100 3299 -14 1788 144 10 39 chr2 27168320 27168625 -223519229 + AluJb SINE Alu 1 296 -16 2340 106 0 3 chr2 27168630 27168941 -223518913 + AluY SINE Alu 1 310 -1 844 237 147 21 chr2 27169541 27170010 -223517844 - L1MC5 LINE L1 -178 7783 7256 2355 105 0 0 chr2 27171104 27171410 -223516444 + AluSx SINE Alu 4 309 -3 259 293 197 14 chr2 27172145 27172292 -223515562 + MIR3 SINE MIR 35 208 0 2376 95 3 19 chr2 27173248 27173564 -223514290 - AluSp SINE Alu -2 311 1 681 234 21 0 chr2 27176399 27176540 -223511314 + FRAM SINE Alu 2 145 -31 1976 113 29 4 chr2 27176542 27176837 -223511017 - AluSp SINE Alu 0 302 1 2480 84 0 3 chr2 27176862 27177170 -223510684 - AluSc SINE Alu -2 307 1 1280 201 28 32 chr2 27177229 27177512 -223510342 - AluJo SINE Alu -20 292 11 2238 117 3 0 chr2 27177548 27177848 -223510006 + AluSg SINE Alu 1 301 -9 2215 110 7 0 chr2 27177908 27178198 -223509656 + AluSq SINE Alu 1 292 -21 2045 104 58 0 chr2 27178312 27178590 -223509264 + AluSq SINE Alu 1 294 -19 2421 83 0 3 chr2 27178946 27179258 -223508596 - AluY SINE Alu 0 311 1 444 265 38 23 chr2 27179700 27179832 -223508022 - MIR SINE MIR -108 154 21 953 148 11 85 chr2 27183655 27183844 -223504010 + AluJb SINE Alu 129 303 -9 234 259 84 21 chr2 27185092 27185235 -223502619 - L1ME LINE L1 -369 5752 5601 2254 105 3 10 chr2 27185579 27185885 -223501969 - AluSx SINE Alu -3 309 6 329 265 138 50 chr2 27186512 27186759 -223501095 + L2 LINE L2 2777 3049 -264 270 0 0 0 chr2 27186807 27186837 -223501017 + (CA)n Simple_repeat Simple_repeat 2 31 0 205 200 0 0 chr2 27186837 27186877 -223500977 + (TA)n Simple_repeat Simple_repeat 1 40 0 1913 138 50 0 chr2 27186877 27187160 -223500694 - AluJb SINE Alu -15 297 1 622 96 4 3 chr2 27187323 27187553 -223500301 + AluSg SINE Alu 1 297 -13 465 204 48 10 chr2 27187574 27187677 -223500177 + L2 LINE L2 3201 3307 -6 207 227 160 40 chr2 27187872 27187947 -223499907 + L2 LINE L2 3188 3271 -1 181 286 143 0 chr2 27187987 27188071 -223499783 - MIR SINE MIR -65 197 102 463 307 34 3 chr2 27188395 27188559 -223499295 + MIR SINE MIR 20 141 -67 528 245 116 19 chr2 27188896 27189051 -223498803 - MIR3 SINE MIR -9 199 30 292 186 51 0 chr2 27189374 27189433 -223498421 + MIR SINE MIR 128 189 -73 1293 119 11 0 chr2 27190164 27190341 -223497513 - AluSg/x SINE Alu -2 310 132 2380 103 0 10 chr2 27190541 27190853 -223497001 + AluSc SINE Alu 1 309 0 1954 78 112 4 chr2 27191307 27191576 -223496278 - AluYa8 SINE Alu -12 298 1 260 333 133 0 chr2 27191696 27191816 -223496038 - L2 LINE L2 0 3272 3137 1926 218 120 107 chr2 27191817 27191858 -223495996 - L2 LINE L2 -1 3312 3273 231 61 0 0 chr2 27191858 27191891 -223495963 + (CAGTA)n Simple_repeat Simple_repeat 3 35 0 1926 218 120 107 chr2 27191891 27192083 -223495771 - L2 LINE L2 -40 3273 3085 2449 87 3 10 chr2 27192083 27192395 -223495459 - AluSx SINE Alu -2 310 1 1926 218 120 107 chr2 27192395 27193132 -223494722 - L2 LINE L2 -228 3085 2358 2118 133 7 3 chr2 27193132 27193433 -223494421 - AluSx SINE Alu -10 302 1 1926 218 120 107 chr2 27193433 27193444 -223494410 - L2 LINE L2 -955 2358 2349 376 204 41 20 chr2 27193444 27193542 -223494312 - L1MC5 LINE L1 -36 7925 7826 1926 218 120 107 chr2 27193542 27193757 -223494097 - L2 LINE L2 -964 2349 2005 1159 158 0 0 chr2 27193829 27194000 -223493854 + AluJb SINE Alu 142 312 0 234 241 19 0 chr2 27194036 27194090 -223493764 - L2 LINE L2 -202 3070 3016 395 202 97 116 chr2 27194193 27194451 -223493403 - L2 LINE L2 -38 3234 2982 216 0 0 0 chr2 27195681 27195705 -223492149 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 255 277 103 0 chr2 27196271 27196394 -223491460 + MIR SINE MIR 23 155 -61 291 54 0 0 chr2 27197539 27197576 -223490278 + (CCCCCG)n Simple_repeat Simple_repeat 5 41 0 2316 94 7 10 chr2 27197653 27197960 -223489894 + AluSq SINE Alu 1 306 -7 201 133 0 0 chr2 27198312 27198342 -223489512 + L3 LINE CR1 1424 1453 -124 2221 104 0 47 chr2 27198601 27198919 -223488935 - AluSx SINE Alu -9 303 1 2138 104 7 4 chr2 27198927 27199239 -223488615 - AluSg SINE Alu 0 313 1 203 189 0 0 chr2 27199894 27199931 -223487923 + (TTG)n Simple_repeat Simple_repeat 3 39 0 2471 92 0 9 chr2 27200076 27200391 -223487463 + AluSx SINE Alu 1 312 0 2508 93 0 0 chr2 27200402 27200712 -223487142 + AluSg SINE Alu 1 310 0 194 0 39 0 chr2 27200956 27200982 -223486872 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1742 129 39 25 chr2 27200995 27201274 -223486580 - AluSx SINE Alu -28 284 2 1854 179 0 35 chr2 27201308 27201627 -223486227 + AluJb SINE Alu 1 308 -4 191 114 29 0 chr2 27201627 27201662 -223486192 + GA-rich Low_complexity Low_complexity 1 36 0 245 111 0 0 chr2 27203177 27203213 -223484641 + U2 snRNA snRNA 1 36 -152 450 53 0 0 chr2 27205443 27205500 -223482354 + (CA)n Simple_repeat Simple_repeat 1 57 0 2312 116 0 0 chr2 27205531 27205834 -223482020 + AluSg SINE Alu 1 303 -7 507 161 0 45 chr2 27207289 27207401 -223480453 - FLAM_A SINE Alu 0 142 36 1847 166 3 16 chr2 27208341 27208649 -223479205 - AluJb SINE Alu -8 304 1 1706 181 17 27 chr2 27208670 27208969 -223478885 - AluJo SINE Alu -16 296 1 474 237 23 15 chr2 27210295 27210426 -223477428 - Charlie4a DNA MER1_type -10 498 367 457 206 95 32 chr2 27210426 27210487 -223477367 + MER106B DNA MER1_type 1 57 -1002 2133 93 4 4 chr2 27210487 27210757 -223477097 - AluSp SINE Alu -43 270 1 457 206 95 32 chr2 27210757 27210881 -223476973 + MER106B DNA MER1_type 57 1022 -37 704 165 0 0 chr2 27210883 27210992 -223476862 + FLAM_A SINE Alu 8 116 -26 2422 102 0 0 chr2 27211001 27211306 -223476548 - AluSx SINE Alu -1 311 7 26 0 0 0 chr2 27211330 27211356 -223476498 + AT_rich Low_complexity Low_complexity 1 26 0 1021 181 32 48 chr2 27211395 27211527 -223476327 - Charlie4a DNA MER1_type -1581 380 249 1820 97 85 0 chr2 27211527 27211813 -223476041 + AluY SINE Alu 1 308 0 1021 181 32 48 chr2 27211813 27211925 -223475929 - Charlie4a DNA MER1_type -1712 249 137 275 143 71 79 chr2 27212116 27212212 -223475642 + MER113 DNA MER1_type? 11 107 -414 2127 146 0 3 chr2 27212212 27212521 -223475333 + AluSq SINE Alu 1 308 -5 275 143 71 79 chr2 27212521 27212550 -223475304 + MER113 DNA MER1_type? 107 135 -386 1206 187 13 18 chr2 27213433 27213658 -223474196 + AluJo SINE Alu 6 229 -83 1694 172 87 12 chr2 27213679 27214081 -223473773 - L1MB3 LINE L1 0 6183 5752 2244 89 3 10 chr2 27214879 27215208 -223472646 + AluSx SINE Alu 1 312 0 1657 168 33 0 chr2 27215256 27215560 -223472294 - AluJb SINE Alu 0 313 1 838 248 4 69 chr2 27215583 27215749 -223472105 + MIR SINE MIR 1 147 -115 2264 97 7 7 chr2 27215749 27216049 -223471805 + AluSc SINE Alu 1 300 -9 838 248 4 69 chr2 27216049 27216128 -223471726 + MIR SINE MIR 147 230 -32 2447 95 0 7 chr2 27216512 27216818 -223471036 - AluSx SINE Alu -8 304 1 281 299 144 0 chr2 27218215 27218312 -223469542 + L2 LINE L2 3203 3313 0 2146 100 78 0 chr2 27219447 27219728 -223468126 + AluSx SINE Alu 1 303 -9 189 0 0 0 chr2 27222877 27222898 -223464956 + (T)n Simple_repeat Simple_repeat 1 21 0 194 175 50 0 chr2 27224242 27224282 -223463572 - MIR SINE MIR -60 148 107 2121 103 21 3 chr2 27224286 27224576 -223463278 + AluSq SINE Alu 5 299 -14 2262 119 0 16 chr2 27225521 27225831 -223462023 - AluSx SINE Alu -7 305 1 253 269 30 0 chr2 27225985 27226052 -223461802 - MIR SINE MIR -30 232 164 1726 165 3 38 chr2 27226253 27226569 -223461285 - AluJb SINE Alu -7 305 1 700 158 0 86 chr2 27226571 27226635 -223461219 - FLAM_C SINE Alu -172 140 72 2557 34 41 3 chr2 27226635 27226930 -223460924 - AluY SINE Alu -5 306 1 700 158 0 86 chr2 27226930 27227017 -223460837 - FLAM_C SINE Alu -240 72 2 200 316 132 11 chr2 27227316 27227490 -223460364 - L2 LINE L2 -830 2484 2290 411 226 118 0 chr2 27227544 27227646 -223460208 + L2 LINE L2 3195 3308 -5 2658 54 0 6 chr2 27228172 27228485 -223459369 + AluY SINE Alu 1 311 0 722 192 0 0 chr2 27229347 27229472 -223458382 + FLAM_A SINE Alu 4 128 -5 217 193 24 48 chr2 27230331 27230414 -223457440 + C-rich Low_complexity Low_complexity 3 83 0 286 255 176 0 chr2 27230928 27231030 -223456824 - MIR SINE MIR -115 147 28 185 311 75 19 chr2 27231149 27231255 -223456599 + MIR3 SINE MIR 81 192 -16 1554 82 0 29 chr2 27232036 27232203 -223455651 - AluSg/x SINE Alu -13 299 138 2432 88 3 0 chr2 27232203 27232498 -223455356 - AluSp SINE Alu -17 296 1 1554 82 0 29 chr2 27232498 27232538 -223455316 - AluSg/x SINE Alu -174 138 98 1976 158 0 0 chr2 27232538 27232823 -223455031 - AluJb SINE Alu -27 285 1 1939 144 6 44 chr2 27232825 27233144 -223454710 - AluJo SINE Alu -3 309 3 2062 145 3 3 chr2 27233153 27233450 -223454404 - AluJo SINE Alu -15 297 1 372 22 0 0 chr2 27234244 27234289 -223453565 + (CA)n Simple_repeat Simple_repeat 2 46 0 249 33 0 0 chr2 27234630 27234660 -223453194 + (CTGGGG)n Simple_repeat Simple_repeat 1 30 0 180 152 0 0 chr2 27235706 27235739 -223452115 + (TG)n Simple_repeat Simple_repeat 1 33 0 531 266 80 34 chr2 27236969 27237206 -223450648 + MIR SINE MIR 1 248 -14 292 226 77 54 chr2 27237838 27238006 -223449848 + L1ME4a LINE L1 5946 6117 -4 301 233 55 0 chr2 27238623 27238696 -223449158 - MIR3 SINE MIR -4 204 128 2233 98 0 0 chr2 27238698 27238995 -223448859 + AluSc SINE Alu 1 297 -12 876 156 0 0 chr2 27238996 27239137 -223448717 - FRAM SINE Alu -35 141 1 230 308 67 10 chr2 27239137 27239241 -223448613 - MIR3 SINE MIR -49 159 50 23 0 0 0 chr2 27241585 27241608 -223446246 + GC_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 27242191 27242216 -223445638 + GC_rich Low_complexity Low_complexity 1 25 0 1982 66 81 11 chr2 27242484 27242755 -223445099 + AluY SINE Alu 9 298 -13 264 249 49 100 chr2 27242761 27243025 -223444829 + L1MEd LINE L1 1001 1344 -1146 474 271 94 54 chr2 27243513 27243716 -223444138 + MIR SINE MIR 38 248 -14 228 328 16 0 chr2 27243747 27243811 -223444043 + MIR SINE MIR 42 106 -102 287 350 44 22 chr2 27244162 27244342 -223443512 + MIR SINE MIR 9 192 -70 21 0 0 0 chr2 27245999 27246020 -223441834 + GC_rich Low_complexity Low_complexity 1 21 0 312 282 107 8 chr2 27247302 27247396 -223440458 + MIR3 SINE MIR 42 154 -54 2362 87 0 0 chr2 27247396 27247705 -223440149 + AluSg SINE Alu 1 309 -1 312 282 107 8 chr2 27247705 27247741 -223440113 + MIR3 SINE MIR 154 185 -23 204 121 0 0 chr2 27247977 27248010 -223439844 - L2 LINE L2 -9 3304 3272 2025 96 36 0 chr2 27248420 27248700 -223439154 - AluSx SINE Alu -22 290 1 2268 94 0 13 chr2 27249038 27249347 -223438507 - AluSg SINE Alu -5 305 1 1889 151 3 19 chr2 27249348 27249665 -223438189 - AluJo SINE Alu 0 312 1 374 290 142 18 chr2 27251723 27251892 -223435962 - MIR3 SINE MIR -7 201 12 2013 137 3 0 chr2 27252020 27252312 -223435542 - AluSx SINE Alu -19 293 1 1815 155 23 16 chr2 27252343 27252652 -223435202 + AluJo SINE Alu 1 311 -1 195 273 227 55 chr2 27253800 27253845 -223434009 - MIR SINE MIR -72 190 154 225 94 0 0 chr2 27253845 27253877 -223433977 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 2149 102 0 0 chr2 27253877 27254162 -223433692 - AluSx SINE Alu -27 285 1 195 273 227 55 chr2 27254162 27254243 -223433611 - MIR SINE MIR -107 155 41 344 219 14 0 chr2 27254526 27254599 -223433255 - MIR SINE MIR -105 103 30 306 293 50 7 chr2 27255806 27255946 -223431908 + MIR3 SINE MIR 48 193 -15 2053 121 10 0 chr2 27256358 27256665 -223431189 - AluSx SINE Alu -2 310 1 2075 96 39 0 chr2 27256665 27256946 -223430908 - AluSx SINE Alu -20 292 1 2188 86 0 0 chr2 27257053 27257362 -223430492 - AluSx SINE Alu 0 311 3 832 161 22 83 chr2 27257624 27257854 -223430000 + AluJo SINE Alu 87 302 -10 1872 156 0 3 chr2 27257954 27258255 -223429599 + AluSx SINE Alu 13 312 0 2165 112 0 3 chr2 27258255 27258560 -223429294 + AluSg SINE Alu 1 304 -6 2234 95 10 0 chr2 27258627 27258933 -223428921 - AluSq SINE Alu -4 309 1 241 384 0 30 chr2 27258945 27259078 -223428776 - MIR SINE MIR -124 138 10 273 282 86 55 chr2 27261904 27262067 -223425787 + MIR3 SINE MIR 18 185 -23 267 196 0 0 chr2 27262210 27262261 -223425593 + MIR3 SINE MIR 155 205 -3 304 231 131 62 chr2 27262607 27262737 -223425117 + MIR SINE MIR 30 168 -94 2006 117 3 10 chr2 27263392 27263683 -223424171 - AluSx SINE Alu -23 289 1 436 275 161 21 chr2 27264104 27264340 -223423514 + L3 LINE CR1 1140 1408 -169 2197 69 17 3 chr2 27265626 27265915 -223421939 - AluY SINE Alu -18 293 1 2155 99 10 0 chr2 27265917 27266210 -223421644 - AluSq SINE Alu -17 296 1 519 156 0 56 chr2 27266236 27266256 -223421598 + AluJo SINE Alu 33 53 -259 4308 85 0 18 chr2 27266256 27266644 -223421210 + MER41A LTR ERV1 1 377 -177 2137 115 7 0 chr2 27266644 27266948 -223420906 + AluSq SINE Alu 1 306 -7 4308 85 0 18 chr2 27266948 27267123 -223420731 + MER41A LTR ERV1 377 554 0 519 156 0 56 chr2 27267123 27267192 -223420662 + AluJo SINE Alu 53 117 -195 1536 131 40 24 chr2 27267207 27267459 -223420395 - AluJb SINE Alu -21 291 36 194 133 0 22 chr2 27267467 27267512 -223420342 + (CTA)n Simple_repeat Simple_repeat 1 44 0 817 170 15 78 chr2 27267576 27267613 -223420241 + AluJo SINE Alu 104 142 -170 2147 89 3 3 chr2 27267613 27267938 -223419916 + AluSq SINE Alu 4 313 0 817 170 15 78 chr2 27267938 27268106 -223419748 + AluJo SINE Alu 142 296 -16 1508 123 131 0 chr2 27268110 27268362 -223419492 + AluSx SINE Alu 2 286 -16 369 0 0 0 chr2 27268365 27268406 -223419448 + (TAGA)n Simple_repeat Simple_repeat 3 43 0 856 230 6 6 chr2 27268407 27268572 -223419282 + FRAM SINE Alu 1 165 -1 228 182 0 0 chr2 27270019 27270063 -223417791 + MIR SINE MIR 27 70 -138 1869 140 0 3 chr2 27270080 27270366 -223417488 - AluJb SINE Alu -9 303 19 1669 243 98 25 chr2 27270929 27271021 -223416833 + MLT1J LTR MaLR 3 87 -424 1994 146 0 0 chr2 27271021 27271322 -223416532 + AluSx SINE Alu 1 301 -11 1669 243 98 25 chr2 27271322 27271699 -223416155 + MLT1J LTR MaLR 87 506 -5 2108 100 7 3 chr2 27272474 27272764 -223415090 + AluSq SINE Alu 1 291 -22 841 102 0 88 chr2 27272863 27273010 -223414844 + AluSg/x SINE Alu 163 296 -16 603 185 39 23 chr2 27273142 27273272 -223414582 - FLAM_A SINE Alu -1 132 1 364 306 12 0 chr2 27273281 27273366 -223414488 - L1MC4 LINE L1 -1338 6704 6619 1849 127 7 3 chr2 27273366 27273650 -223414204 - AluJb SINE Alu -27 285 1 283 251 103 55 chr2 27273656 27273947 -223413907 - L1MEd LINE L1 -5214 905 601 2179 103 0 0 chr2 27274020 27274310 -223413544 - AluSc SINE Alu -19 290 1 2002 113 20 13 chr2 27276251 27276552 -223411302 + AluSq SINE Alu 8 310 -3 2076 116 3 16 chr2 27276560 27276871 -223410983 + AluSx SINE Alu 1 307 -5 916 251 25 77 chr2 27277052 27277232 -223410622 + HAL1b LINE L1 733 921 -427 2134 97 3 3 chr2 27277232 27277521 -223410333 - AluSc SINE Alu -20 289 1 916 251 25 77 chr2 27277521 27277552 -223410302 + HAL1b LINE L1 921 952 -396 1749 176 0 3 chr2 27277552 27277854 -223410000 + AluJb SINE Alu 1 301 -11 916 251 25 77 chr2 27277854 27278072 -223409782 + HAL1b LINE L1 952 1141 -207 189 74 0 0 chr2 27278072 27278099 -223409755 + (TTAG)n Simple_repeat Simple_repeat 2 28 0 726 93 75 0 chr2 27278100 27278207 -223409647 - AluJb SINE Alu -197 115 1 2267 82 3 0 chr2 27278304 27278609 -223409245 - AluY SINE Alu -5 306 1 2128 109 0 0 chr2 27278615 27278908 -223408946 - AluSc SINE Alu -15 294 2 747 183 8 15 chr2 27278912 27279043 -223408811 - FLAM_C SINE Alu -3 130 1 1532 176 44 10 chr2 27279052 27279348 -223408506 - AluSx SINE Alu -6 306 1 884 192 0 0 chr2 27279943 27280099 -223407755 - AluJo SINE Alu -37 275 120 721 281 32 56 chr2 27280190 27280538 -223407316 + L2 LINE L2 1426 1764 -1550 1613 191 3 7 chr2 27280538 27280836 -223407018 - AluJo SINE Alu -15 297 1 721 281 32 56 chr2 27280836 27280918 -223406936 + L2 LINE L2 1764 1846 -1468 1445 161 11 62 chr2 27331748 27331855 -223355999 + AluJb SINE Alu 27 138 -174 2310 81 10 0 chr2 27331855 27332152 -223355702 + AluY SINE Alu 1 300 -11 1445 161 11 62 chr2 27332152 27332304 -223355550 + AluJb SINE Alu 138 273 -39 375 306 0 12 chr2 27332637 27332807 -223355047 + L1MC/D LINE L1 5266 5433 -2352 2188 79 4 0 chr2 27333073 27333384 -223354470 - AluY SINE Alu 0 312 1 947 148 7 7 chr2 27333515 27333664 -223354190 - AluJb SINE Alu -26 286 138 1933 135 10 7 chr2 27333674 27333971 -223353883 - AluSx SINE Alu -14 298 1 21 0 0 0 chr2 27333974 27333995 -223353859 + AT_rich Low_complexity Low_complexity 1 21 0 338 115 0 19 chr2 27334421 27334473 -223353381 - MLT1A2 LTR MaLR -323 51 1 730 241 5 9 chr2 27334473 27334685 -223353169 - L1M4 LINE L1 -2139 4007 3797 316 197 0 16 chr2 27334678 27334739 -223353115 + L1 LINE L1 4092 4151 -1995 * 328 226 3 57 chr2 27334743 27334830 -223353024 - L1MCa LINE L1 -4649 1733 1664 1558 180 0 8 chr2 27334830 27335086 -223352768 + AluJo SINE Alu 1 254 -58 328 226 3 57 chr2 27335086 27335104 -223352750 - L1MCa LINE L1 -4718 1664 1647 274 301 49 7 chr2 27335136 27335279 -223352575 - L1MCa LINE L1 -4769 1615 1467 2096 105 3 14 chr2 27335292 27335588 -223352266 + AluSc SINE Alu 1 293 -16 791 152 37 30 chr2 27335738 27335902 -223351952 + L1MA7 LINE L1 6115 6279 -12 1523 181 61 4 chr2 27335907 27336184 -223351670 - AluSx SINE Alu -19 293 1 306 306 81 77 chr2 27336329 27336488 -223351366 + L1MEd LINE L1 547 709 -5496 2531 50 0 3 chr2 27336488 27336785 -223351069 + AluY SINE Alu 1 296 -15 306 306 81 77 chr2 27336785 27336834 -223351020 + L1MEd LINE L1 709 756 -5449 503 248 48 0 chr2 27336835 27336980 -223350874 - MER104 DNA Tc2 -1 179 28 2399 94 0 3 chr2 27337081 27337389 -223350465 + AluSc SINE Alu 2 308 -1 318 267 67 22 chr2 27337523 27337658 -223350196 + L1MEd LINE L1 2002 2142 -4254 1092 266 31 65 chr2 27338356 27338719 -223349135 - L1 LINE L1 -1871 4275 3901 2175 134 0 0 chr2 27338719 27339026 -223348828 - AluSx SINE Alu -5 307 1 1092 266 31 65 chr2 27339026 27339186 -223348668 - L1 LINE L1 -2245 3901 3786 2164 132 3 3 chr2 27339186 27339496 -223348358 - AluSx SINE Alu -1 311 2 1092 266 31 65 chr2 27339496 27339672 -223348182 - L1 LINE L1 -2360 3786 3606 2046 136 74 47 chr2 27339800 27340135 -223347719 - MLT2C2 LTR ERVL -48 416 67 2151 98 39 0 chr2 27340135 27340421 -223347433 - AluSc SINE Alu -12 297 1 2046 136 74 47 chr2 27340421 27340490 -223347364 - MLT2C2 LTR ERVL -397 67 1 3438 179 29 8 chr2 27340491 27341327 -223346527 - L1M4 LINE L1 -1091 5055 4107 307 212 0 15 chr2 27341510 27341576 -223346278 - MLT-int LTR MaLR -992 743 679 189 147 0 0 chr2 27343714 27343748 -223344106 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 420 189 142 0 chr2 27344198 27344304 -223343550 - MIR3 SINE MIR -44 164 44 1089 299 98 27 chr2 27345366 27345377 -223342477 + L1MEd LINE L1 81 90 -6029 2143 96 50 0 chr2 27345377 27345657 -223342197 - AluSx SINE Alu -18 294 1 1089 299 98 27 chr2 27345657 27346156 -223341698 + L1MEd LINE L1 90 627 -5492 1953 125 3 77 chr2 27346176 27346331 -223341523 + AluJb SINE Alu 1 119 -193 2299 107 0 3 chr2 27346331 27346629 -223341225 + AluSx SINE Alu 1 297 -15 1953 125 3 77 chr2 27346629 27346809 -223341045 + AluJb SINE Alu 119 311 -1 364 273 8 8 chr2 27346810 27346942 -223340912 + L1M4 LINE L1 3330 3461 -2685 561 301 17 7 chr2 27346994 27347290 -223340564 + L1M4 LINE L1 4271 4569 -1577 402 77 0 0 chr2 27347290 27347342 -223340512 - Alu SINE Alu -15 296 245 189 0 0 0 chr2 27347442 27347463 -223340391 + (A)n Simple_repeat Simple_repeat 1 21 0 542 103 23 11 chr2 27347599 27347686 -223340168 - L1MC1 LINE L1 0 6333 6246 24 0 0 0 chr2 27347994 27348018 -223339836 + AT_rich Low_complexity Low_complexity 1 24 0 6594 67 8 68 chr2 27348018 27349026 -223338828 - SVA Other Other -6 1380 433 1335 66 40 13 chr2 27349043 27349269 -223338585 - SVA Other Other -520 866 635 5543 75 28 62 chr2 27349295 27350192 -223337662 - SVA Other Other -520 866 1 372 253 0 0 chr2 27350224 27350303 -223337551 + L2 LINE L2 3193 3271 -1 793 179 39 62 chr2 27350486 27350533 -223337321 - MER3 DNA MER1_type 0 209 162 1732 156 28 10 chr2 27350533 27350822 -223337032 - AluJo SINE Alu -18 294 1 793 179 39 62 chr2 27350822 27350864 -223336990 - MER3 DNA MER1_type -47 162 121 2392 97 7 0 chr2 27350864 27351172 -223336682 + AluSx SINE Alu 1 310 -2 793 179 39 62 chr2 27351172 27351260 -223336594 - MER3 DNA MER1_type -88 121 35 1554 106 75 78 chr2 27351565 27351858 -223335996 + AluSx SINE Alu 3 294 -18 24 67 0 0 chr2 27352050 27352095 -223335759 + AT_rich Low_complexity Low_complexity 1 45 0 1410 203 22 22 chr2 27352950 27353271 -223334583 - L1ME2 LINE L1 -1 6163 5843 2128 126 0 41 chr2 27353278 27353596 -223334258 - AluSx SINE Alu -7 305 1 2243 128 0 0 chr2 27353774 27354071 -223333783 - AluSx SINE Alu -15 297 1 1424 213 52 30 chr2 27354175 27354316 -223333538 - L1ME2 LINE L1 -524 5640 5504 1810 157 44 0 chr2 27354316 27354609 -223333245 - AluSx SINE Alu -4 308 3 1424 213 52 30 chr2 27354609 27355180 -223332674 - L1ME2 LINE L1 -660 5504 4917 758 170 6 29 chr2 27355181 27355279 -223332575 - MER96B DNA MER1_type? -1 416 322 1783 199 3 0 chr2 27355279 27355580 -223332274 - AluJb SINE Alu -10 302 1 758 170 6 29 chr2 27355580 27355652 -223332202 - MER96B DNA MER1_type? -95 322 250 1505 252 43 19 chr2 27355711 27355926 -223331928 - L1ME2 LINE L1 -1225 4921 4713 2219 118 7 3 chr2 27355926 27356223 -223331631 - AluSx SINE Alu -14 298 1 1505 252 43 19 chr2 27356223 27356468 -223331386 - L1ME2 LINE L1 -1433 4713 4450 590 189 220 70 chr2 27356497 27356724 -223331130 - L1MC5 LINE L1 -30 7931 7651 2335 72 41 0 chr2 27356724 27357015 -223330839 - AluY SINE Alu -6 305 3 590 189 220 70 chr2 27357015 27357073 -223330781 - L1MC5 LINE L1 -310 7651 7603 526 156 0 0 chr2 27357076 27357153 -223330701 + AluJ/FLAM SINE Alu 3 79 -233 34 0 0 0 chr2 27357334 27357368 -223330486 + AT_rich Low_complexity Low_complexity 1 34 0 423 300 46 49 chr2 27357368 27357540 -223330314 + L1ME3A LINE L1 1909 2080 -4135 1213 184 23 5 chr2 27357540 27357757 -223330097 - MER58A DNA MER1_type -3 221 1 423 300 46 49 chr2 27357757 27357862 -223329992 + L1ME3A LINE L1 2080 2131 -4084 2143 117 7 7 chr2 27357862 27358160 -223329694 + AluSx SINE Alu 7 304 -8 423 300 46 49 chr2 27358160 27358276 -223329578 + L1ME3A LINE L1 2131 2246 -3969 262 157 14 29 chr2 27358354 27358424 -223329430 + L1ME3A LINE L1 2323 2391 -3824 2704 153 22 24 chr2 27358438 27358896 -223328958 - LTR32 LTR ERVL 0 471 15 517 95 14 14 chr2 27358876 27358950 -223328904 - LTR32 LTR ERVL -383 88 15 * 2021 252 127 22 chr2 27358950 27359957 -223327897 + L1ME3A LINE L1 2401 3513 -2702 589 204 0 9 chr2 27359978 27360086 -223327768 + FLAM_A SINE Alu 12 118 -24 752 285 29 36 chr2 27360138 27360390 -223327464 + L1ME3A LINE L1 3542 3793 -2422 2213 119 0 0 chr2 27360390 27360683 -223327171 + AluJb SINE Alu 1 293 -19 752 285 29 36 chr2 27360683 27360739 -223327115 + L1ME3A LINE L1 3793 3848 -2367 1011 249 29 21 chr2 27360743 27361024 -223326830 + L1ME3A LINE L1 5436 5718 -513 929 182 22 11 chr2 27361037 27361218 -223326636 + MER5A DNA MER1_type 7 189 0 624 258 72 19 chr2 27361222 27361486 -223326368 + L1ME3A LINE L1 5722 5999 -240 200 93 70 0 chr2 27361499 27361542 -223326312 + (TA)n Simple_repeat Simple_repeat 1 46 0 194 284 147 0 chr2 27361554 27361656 -223326198 + L2 LINE L2 2233 2349 -965 2349 82 3 0 chr2 27362223 27362514 -223325340 + AluSc SINE Alu 1 292 -17 561 232 148 7 chr2 27363770 27363925 -223323929 - MER5A DNA MER1_type -6 183 7 2281 106 3 0 chr2 27364052 27364355 -223323499 + AluSx SINE Alu 1 304 -8 6970 68 15 19 chr2 27364609 27366217 -223321637 - SVA Other Other -683 1386 57 216 0 0 0 chr2 27366217 27366241 -223321613 + (GGGAGA)n Simple_repeat Simple_repeat 5 28 0 419 267 92 63 chr2 27366405 27366611 -223321243 + MIR SINE MIR 32 243 -19 183 306 41 50 chr2 27366624 27366745 -223321109 + MIR SINE MIR 74 193 -69 185 298 0 18 chr2 27367572 27367629 -223320225 + MIR SINE MIR 21 76 -132 1220 96 23 105 chr2 27367699 27367918 -223319936 - AluSg/x SINE Alu -27 283 83 1373 151 114 41 chr2 27368183 27368285 -223319569 + AluJb SINE Alu 1 94 -218 2360 82 3 0 chr2 27368285 27368579 -223319275 + AluSq SINE Alu 1 295 -18 1373 151 114 41 chr2 27368579 27368747 -223319107 + AluJb SINE Alu 94 291 -21 2085 106 32 0 chr2 27368854 27369137 -223318717 + AluSx SINE Alu 1 292 -20 683 265 29 20 chr2 27369152 27369356 -223318498 + MIR SINE MIR 57 262 0 2062 142 7 7 chr2 27369494 27369797 -223318057 + AluSx SINE Alu 1 303 -9 218 250 80 30 chr2 27370802 27370902 -223316952 + L2 LINE L2 3165 3269 -3 232 274 0 0 chr2 27371535 27371597 -223316257 + T-rich Low_complexity Low_complexity 1 62 0 2427 60 0 0 chr2 27372125 27372428 -223315426 - AluY SINE Alu 0 303 1 1525 139 0 54 chr2 27373478 27373736 -223314118 + AluJb SINE Alu 58 301 -11 1938 100 30 7 chr2 27374173 27374444 -223313410 + AluSq SINE Alu 21 297 -16 2253 100 3 0 chr2 27374455 27374756 -223313098 + AluSx SINE Alu 1 302 -10 2346 95 7 3 chr2 27374900 27375204 -223312650 + AluSg SINE Alu 2 306 -4 384 22 0 0 chr2 27375267 27375312 -223312542 + (TG)n Simple_repeat Simple_repeat 1 45 0 2457 78 0 3 chr2 27377432 27377728 -223310126 + AluY SINE Alu 1 295 -16 276 347 41 14 chr2 27377978 27378125 -223309729 - L2 LINE L2 -1 3271 3121 707 204 0 0 chr2 27378129 27378242 -223309612 + FLAM_A SINE Alu 1 113 -29 1883 150 0 11 chr2 27379611 27379920 -223307934 + AluJb SINE Alu 1 306 0 775 232 18 12 chr2 27380305 27380469 -223307385 + FRAM SINE Alu 2 166 0 241 154 0 0 chr2 27380579 27380618 -223307236 - MIR3 SINE MIR -3 205 167 933 104 0 71 chr2 27380804 27380958 -223306896 + FLAM_C SINE Alu 1 143 0 448 214 188 0 chr2 27380963 27381075 -223306779 + MIR SINE MIR 28 160 -102 694 115 10 0 chr2 27381139 27381235 -223306619 + U6 snRNA snRNA 4 100 -7 586 261 170 38 chr2 27381404 27381884 -223305970 - L1M4 LINE L1 -517 5645 5028 2472 93 0 0 chr2 27381884 27382195 -223305659 + AluSq SINE Alu 1 311 -2 586 261 170 38 chr2 27382195 27382428 -223305426 - L1M4 LINE L1 -1134 5028 4827 243 271 14 0 chr2 27382555 27382625 -223305229 + MIR SINE MIR 81 151 -57 2311 110 3 0 chr2 27382628 27382936 -223304918 + AluSq SINE Alu 1 309 -4 1545 68 16 0 chr2 27383124 27383315 -223304539 + AluY SINE Alu 1 194 -117 293 145 15 0 chr2 27383445 27383498 -223304356 - Alu SINE Alu -268 40 1 2183 95 3 30 chr2 27384516 27384820 -223303034 - AluSx SINE Alu -15 297 2 937 185 10 36 chr2 27386225 27386479 -223301375 - AluJo SINE Alu 0 371 123 2028 116 7 14 chr2 27386722 27387015 -223300839 - AluSx SINE Alu -17 295 5 303 313 75 52 chr2 27387030 27387151 -223300703 - L1MEc LINE L1 -4563 1833 1716 2208 127 3 0 chr2 27387151 27387458 -223300396 - AluSx SINE Alu -4 308 1 303 313 75 52 chr2 27387458 27387643 -223300211 - L1MEc LINE L1 -4680 1716 1520 2379 90 0 3 chr2 27387690 27388001 -223299853 - AluSg SINE Alu 0 310 1 2074 121 3 17 chr2 27388100 27388398 -223299456 - AluSg SINE Alu -16 294 1 1865 141 44 3 chr2 27388762 27389059 -223298795 - AluSx SINE Alu -3 309 1 2137 132 0 7 chr2 27389199 27389502 -223298352 - AluSq SINE Alu -12 301 1 27 29 0 0 chr2 27389502 27389536 -223298318 + AT_rich Low_complexity Low_complexity 1 34 0 649 148 129 77 chr2 27389631 27389786 -223298068 - AluJo SINE Alu -64 248 86 2143 75 11 14 chr2 27389792 27390139 -223297715 - AluY SINE Alu 0 346 1 968 181 65 75 chr2 27390759 27390807 -223297047 - L1MB7 LINE L1 -42 6142 6095 2262 132 0 3 chr2 27390807 27391117 -223296737 - AluSx SINE Alu 0 312 4 968 181 65 75 chr2 27391117 27391360 -223296494 - L1MB7 LINE L1 -89 6095 5854 789 220 0 0 chr2 27392050 27392191 -223295663 - FLAM_C SINE Alu -1 142 2 2117 131 0 16 chr2 27392235 27392549 -223295305 - AluSx SINE Alu -3 309 1 2130 164 43 49 chr2 27392550 27393039 -223294815 - L1MB7 LINE L1 -311 5873 5388 1398 134 5 5 chr2 27393063 27393272 -223294582 - AluSx SINE Alu -103 209 1 2773 151 65 34 chr2 27393278 27393465 -223294389 - L1MB7 LINE L1 -748 5398 5218 1895 118 20 20 chr2 27393465 27393809 -223294045 - AluSx SINE Alu 0 312 5 2773 151 65 34 chr2 27393809 27393826 -223294028 - L1MB7 LINE L1 -928 5218 5203 2567 81 0 0 chr2 27393826 27394134 -223293720 - AluSc SINE Alu -1 308 1 2773 151 65 34 chr2 27394134 27394577 -223293277 - L1MB7 LINE L1 -943 5203 4730 423 224 19 0 chr2 27394587 27394694 -223293160 - L1MB7 LINE L1 -1481 4665 4557 275 229 0 0 chr2 27394726 27394787 -223293067 - L1MB7 LINE L1 -2128 4018 3958 1231 169 9 23 chr2 27394791 27395010 -223292844 - AluJo SINE Alu -12 300 85 1975 196 35 12 chr2 27395011 27395491 -223292363 - L1MB7 LINE L1 -2183 3963 3473 2056 137 7 0 chr2 27395504 27395797 -223292057 + AluSp SINE Alu 1 295 -18 1303 168 17 46 chr2 27395802 27395830 -223292024 - L1MB2 LINE L1 -24 6147 6120 2357 104 0 3 chr2 27395830 27396139 -223291715 - AluSx SINE Alu -4 308 1 1303 168 17 46 chr2 27396139 27396393 -223291461 - L1MB2 LINE L1 -51 6120 5860 2258 87 3 3 chr2 27396393 27396682 -223291172 - AluSx SINE Alu -23 289 1 1303 168 17 46 chr2 27396682 27396790 -223291064 - L1MB2 LINE L1 -311 5860 5476 1603 194 19 13 chr2 27396801 27397110 -223290744 - AluJo SINE Alu -1 311 1 1960 137 11 0 chr2 27397112 27397396 -223290458 - AluSx SINE Alu 0 312 26 2368 112 0 13 chr2 27397408 27397721 -223290133 - AluSx SINE Alu -1 311 3 29 0 0 0 chr2 27397721 27397750 -223290104 + AT_rich Low_complexity Low_complexity 1 29 0 2300 76 6 45 chr2 27397906 27398220 -223289634 - AluSc SINE Alu -7 302 1 2257 80 7 14 chr2 27398478 27398609 -223289245 + AluSx SINE Alu 5 135 -177 2301 100 3 3 chr2 27398609 27398919 -223288935 + AluY SINE Alu 1 310 -1 2257 80 7 14 chr2 27398919 27399076 -223288778 + AluSx SINE Alu 135 291 -21 2158 127 3 7 chr2 27400082 27400389 -223287465 + AluSx SINE Alu 6 311 -1 2470 87 0 3 chr2 27400640 27400949 -223286905 + AluSc SINE Alu 1 308 -1 4579 157 31 32 chr2 27401023 27402023 -223285831 + L1PA16 LINE L1 5171 6166 0 693 179 43 0 chr2 27402103 27402220 -223285634 - FLAM_C SINE Alu -13 130 9 1845 147 41 10 chr2 27402351 27402643 -223285211 + AluSq SINE Alu 1 301 -12 1633 181 7 17 chr2 27402688 27402987 -223284867 - AluJo SINE Alu -16 296 1 216 200 0 0 chr2 27403391 27403441 -223284413 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 247 314 94 57 chr2 27403458 27403617 -223284237 - MIR SINE MIR -50 212 48 2491 70 0 0 chr2 27403777 27404076 -223283778 - AluY SINE Alu -12 299 1 1958 137 0 0 chr2 27404348 27404618 -223283236 - AluY SINE Alu -41 270 1 542 272 47 112 chr2 27404634 27404855 -223282999 - L1MEd LINE L1 -4862 1257 1023 1812 124 0 104 chr2 27404855 27405202 -223282652 - AluJo SINE Alu -1 311 1 542 272 47 112 chr2 27405202 27405482 -223282372 - L1MEd LINE L1 -5096 1023 817 1779 149 14 14 chr2 27405482 27405763 -223282091 - AluJo SINE Alu -31 281 1 542 272 47 112 chr2 27405763 27406003 -223281851 - L1MEd LINE L1 -5302 817 563 2441 88 0 0 chr2 27407273 27407568 -223280286 + AluSg SINE Alu 1 295 -15 1965 164 7 0 chr2 27407576 27407881 -223279973 + AluSx SINE Alu 1 307 -5 521 311 52 52 chr2 27407991 27408239 -223279615 + MIR SINE MIR 4 251 -11 1168 299 109 20 chr2 27408257 27408845 -223279009 + L2 LINE L2 2451 3140 -173 1411 59 99 59 chr2 27408845 27409066 -223278788 + MER30 DNA MER1_type 1 230 0 1168 299 109 20 chr2 27409066 27409257 -223278597 + L2 LINE L2 3140 3313 0 591 154 168 21 chr2 27410087 27410160 -223277694 - MER69A DNA AcHobo -2350 176 115 2090 116 3 7 chr2 27410160 27410454 -223277400 + AluSx SINE Alu 1 293 -19 591 154 168 21 chr2 27410454 27410523 -223277331 - MER69A DNA AcHobo -2411 115 13 8551 52 1 0 chr2 27411546 27412514 -223275340 - LTR5 LTR ERVK 0 969 1 2040 133 3 20 chr2 27414904 27415205 -223272649 - AluJb SINE Alu -16 296 1 2355 115 0 0 chr2 27415426 27415730 -223272124 - AluSx SINE Alu -8 304 1 2392 83 3 0 chr2 27416272 27416561 -223271293 - AluSc SINE Alu -19 290 1 2470 69 0 10 chr2 27416759 27417065 -223270789 - AluY SINE Alu -7 304 2 271 217 0 0 chr2 27419649 27419695 -223268159 + Tigger3(Golem) DNA MER2_type 1 46 -2983 460 164 0 0 chr2 27419699 27419766 -223268088 + AluS SINE Alu 5 71 -242 1202 165 55 21 chr2 27419782 27420018 -223267836 + Tigger3(Golem) DNA MER2_type 2786 3029 0 1400 228 85 41 chr2 27420025 27420485 -223267369 - MLT2B1 LTR ERVL -40 480 1 34 0 0 0 chr2 27420513 27420547 -223267307 + AT_rich Low_complexity Low_complexity 1 34 0 2289 73 0 11 chr2 27420684 27421008 -223266846 - AluY SINE Alu 0 321 1 799 114 43 137 chr2 27421435 27421602 -223266252 - Charlie5 DNA MER1_type 0 2585 2449 2173 128 0 3 chr2 27421602 27421900 -223265954 + AluSx SINE Alu 3 299 -13 799 114 43 137 chr2 27421900 27421987 -223265867 - Charlie5 DNA MER1_type -136 2449 2355 2484 83 0 10 chr2 27424093 27424407 -223263447 + AluY SINE Alu 1 311 0 196 244 0 0 chr2 27425306 27425347 -223262507 - L3b LINE CR1 -9 1574 1534 1983 114 0 77 chr2 27425353 27425493 -223262361 + AluSx SINE Alu 5 107 -205 2802 13 0 31 chr2 27425493 27425810 -223262044 + AluYb8 SINE Alu 1 307 -11 1983 114 0 77 chr2 27425810 27425993 -223261861 + AluSx SINE Alu 107 303 -9 2378 100 0 3 chr2 27427544 27427844 -223260010 + AluSx SINE Alu 3 301 -11 2350 77 13 3 chr2 27428599 27428898 -223258956 - AluSx SINE Alu -10 302 1 202 259 0 0 chr2 27429926 27429980 -223257874 + (CGGGG)n Simple_repeat Simple_repeat 2 55 0 236 250 36 0 chr2 27430121 27430205 -223257649 + C-rich Low_complexity Low_complexity 2 88 0 2184 129 10 0 chr2 27432186 27432489 -223255365 + AluSx SINE Alu 1 306 -6 215 286 0 48 chr2 27432766 27432829 -223255025 + L2 LINE L2 3191 3250 -22 2533 57 7 0 chr2 27432977 27433275 -223254579 - AluY SINE Alu -11 300 1 1720 196 3 0 chr2 27433502 27433793 -223254061 - AluJb SINE Alu -10 302 11 2265 90 31 0 chr2 27434288 27434577 -223253277 - AluSx SINE Alu -14 298 1 2533 59 0 7 chr2 27434587 27434892 -223252962 - AluY SINE Alu -8 303 1 210 211 14 42 chr2 27435309 27435380 -223252474 + C-rich Low_complexity Low_complexity 3 71 0 2283 103 3 3 chr2 27439304 27439595 -223248259 + AluSx SINE Alu 1 291 -21 1778 159 33 10 chr2 27439606 27439908 -223247946 + AluJo SINE Alu 1 309 -3 327 153 0 42 chr2 27439956 27440028 -223247826 + AluJo SINE Alu 68 136 -166 2400 103 0 0 chr2 27440334 27440636 -223247218 + AluSx SINE Alu 1 302 -10 391 289 0 11 chr2 27440947 27441037 -223246817 - L2 LINE L2 0 3313 3225 1780 168 0 30 chr2 27441163 27441466 -223246388 - AluY SINE Alu -17 294 1 1811 148 36 7 chr2 27441725 27442028 -223245826 + AluSx SINE Alu 1 312 0 470 132 0 0 chr2 27442320 27442388 -223245466 + FLAM_A SINE Alu 1 68 -64 36 53 0 0 chr2 27443410 27443467 -223244387 + GC_rich Low_complexity Low_complexity 1 57 0 279 330 58 48 chr2 27444326 27444532 -223243322 - MIR SINE MIR -2 260 53 2027 130 27 10 chr2 27444875 27445175 -223242679 + AluSx SINE Alu 1 305 -7 210 71 0 0 chr2 27445175 27445203 -223242651 + (TA)n Simple_repeat Simple_repeat 2 29 0 2224 109 0 0 chr2 27445372 27445680 -223242174 + AluSq SINE Alu 1 308 0 202 260 60 0 chr2 27445738 27445788 -223242066 + MIR SINE MIR 204 256 -6 409 253 147 13 chr2 27446153 27446208 -223241646 - L1ME4a LINE L1 -74 6047 6001 2307 101 0 3 chr2 27446208 27446504 -223241350 - AluY SINE Alu -16 295 1 409 253 147 13 chr2 27446504 27446598 -223241256 - L1ME4a LINE L1 -120 6001 5878 2350 84 7 0 chr2 27446664 27446986 -223240868 - AluSg SINE Alu 0 310 1 1935 147 3 10 chr2 27446986 27447279 -223240575 - AluSg SINE Alu -19 291 1 503 268 93 58 chr2 27447484 27447689 -223240165 - MIR SINE MIR -19 243 32 2400 89 3 0 chr2 27447907 27448209 -223239645 - AluSp SINE Alu -10 303 1 2360 88 3 13 chr2 27450352 27450658 -223237196 - AluSx SINE Alu 0 312 10 26 82 0 0 chr2 27452328 27452389 -223235465 + GC_rich Low_complexity Low_complexity 1 61 0 381 274 0 0 chr2 27452999 27453083 -223234771 - L2 LINE L2 -1 3271 3188 21 0 0 0 chr2 27453126 27453147 -223234707 + AT_rich Low_complexity Low_complexity 1 21 0 372 263 140 9 chr2 27453176 27453290 -223234564 + MIR SINE MIR 64 192 -70 398 255 147 13 chr2 27453396 27453627 -223234227 + MIR SINE MIR 1 262 0 274 328 24 40 chr2 27455182 27455307 -223232547 - MIR SINE MIR -69 193 71 306 179 26 171 chr2 27456213 27456330 -223231524 + Charlie8 DNA MER1_type 232 2407 -10 796 170 31 98 chr2 27457037 27457093 -223230761 + MER58A DNA MER1_type 1 59 -2361 2283 114 0 13 chr2 27457093 27457408 -223230446 - AluSx SINE Alu -1 311 1 796 170 31 98 chr2 27457408 27457424 -223230430 + MER58A DNA MER1_type 59 75 -2345 1320 142 36 156 chr2 27457424 27457784 -223230070 - AluYb8 SINE Alu -1 317 1 796 170 31 98 chr2 27457784 27457934 -223229920 + MER58A DNA MER1_type 75 209 -15 582 156 11 0 chr2 27457961 27458051 -223229803 + MER5A DNA MER1_type 9 99 -90 184 345 17 0 chr2 27458082 27458140 -223229714 + L3b LINE CR1 1524 1582 -1 375 259 21 124 chr2 27458240 27458433 -223229421 - MER5A DNA MER1_type 0 189 17 351 304 22 54 chr2 27459175 27459359 -223228495 - MER5B DNA MER1_type 0 178 1 205 323 89 76 chr2 27459372 27459530 -223228324 + L3 LINE CR1 1407 1566 -11 569 269 0 65 chr2 27459722 27459908 -223227946 + MER5B DNA MER1_type 1 174 -4 2191 104 35 0 chr2 27461705 27461994 -223225860 - AluSq SINE Alu -14 299 1 2376 100 3 0 chr2 27462193 27462494 -223225360 + AluSx SINE Alu 3 304 -8 2335 56 0 28 chr2 27462494 27462780 -223225074 + AluY SINE Alu 33 311 0 307 341 64 52 chr2 27464807 27464980 -223222874 + MIR3 SINE MIR 25 199 -9 2120 118 28 0 chr2 27465871 27466158 -223221696 - AluSx SINE Alu -17 295 1 249 275 132 33 chr2 27466377 27466468 -223221386 + MIR SINE MIR 34 133 -75 1746 190 0 7 chr2 27466682 27466987 -223220867 - AluJb SINE Alu -9 303 1 457 254 112 76 chr2 27467044 27467347 -223220507 - L1ME4a LINE L1 -23 6098 5785 2450 64 3 3 chr2 27467358 27467653 -223220201 - AluY SINE Alu -16 295 1 718 267 43 12 chr2 27467659 27467917 -223219937 - L1ME LINE L1 -298 5823 5558 1942 136 3 14 chr2 27468265 27468560 -223219294 + AluJb SINE Alu 1 292 -20 2219 129 3 3 chr2 27468566 27468876 -223218978 + AluSx SINE Alu 1 310 -2 24 0 0 0 chr2 27470075 27470099 -223217755 + AT_rich Low_complexity Low_complexity 1 24 0 459 306 64 61 chr2 27470099 27470222 -223217632 - L1ME4a LINE L1 -2192 5616 5495 2090 103 0 35 chr2 27470222 27470551 -223217303 - AluSc SINE Alu 0 319 1 459 306 64 61 chr2 27470551 27470786 -223217068 - L1ME4a LINE L1 -2313 5495 5256 911 177 7 0 chr2 27471107 27471248 -223216606 - AluJb SINE Alu -39 273 132 2334 84 10 0 chr2 27471259 27471556 -223216298 - AluY SINE Alu -11 300 1 30 0 0 0 chr2 27471691 27471721 -223216133 + AT_rich Low_complexity Low_complexity 1 30 0 2281 82 14 0 chr2 27471754 27472048 -223215806 - AluY SINE Alu -13 298 1 943 166 12 6 chr2 27472164 27472327 -223215527 - AluJb SINE Alu -11 301 138 1638 166 17 10 chr2 27472337 27472633 -223215221 - AluSx SINE Alu -14 298 1 21 0 0 0 chr2 27472636 27472657 -223215197 + AT_rich Low_complexity Low_complexity 1 21 0 312 241 48 0 chr2 27472956 27473039 -223214815 + MER88 LTR ERVL 79 165 -299 264 328 15 37 chr2 27472969 27473103 -223214751 - MER74B LTR ERVL -75 547 417 * 1680 176 7 0 chr2 27473108 27473381 -223214473 - AluSq SINE Alu -38 275 1 2317 70 7 3 chr2 27473392 27473676 -223214178 - AluSg SINE Alu -17 293 9 442 237 61 0 chr2 27473684 27473798 -223214056 - MER74B LTR ERVL -191 431 311 519 156 0 0 chr2 27474228 27474305 -223213549 + FLAM_A SINE Alu 31 107 -35 27 0 0 0 chr2 27474308 27474335 -223213519 + AT_rich Low_complexity Low_complexity 1 27 0 2273 95 0 0 chr2 27474468 27474753 -223213101 - AluSx SINE Alu -23 289 5 2125 126 3 32 chr2 27474836 27475033 -223212821 - AluSx SINE Alu -8 304 118 2210 103 14 0 chr2 27475033 27475325 -223212529 - AluSg SINE Alu -14 296 1 2125 126 3 32 chr2 27475325 27475437 -223212417 - AluSx SINE Alu -194 118 4 2682 49 0 3 chr2 27475596 27475903 -223211951 - AluY SINE Alu -5 306 1 1019 102 0 0 chr2 27476153 27476281 -223211573 - AluSq/x SINE Alu -184 128 1 388 319 80 0 chr2 27476459 27476597 -223211257 - MIR SINE MIR -48 214 66 213 121 0 0 chr2 27476650 27476683 -223211171 + (A)n Simple_repeat Simple_repeat 1 33 0 741 229 0 0 chr2 27476685 27476807 -223211047 + FLAM_A SINE Alu 3 124 -9 186 200 0 0 chr2 27476807 27476845 -223211009 + GA-rich Low_complexity Low_complexity 7 47 0 586 136 0 0 chr2 27476868 27476956 -223210898 - AluSg/x SINE Alu -7 303 216 202 275 67 33 chr2 27477108 27477228 -223210626 + L2 LINE L2 2347 2470 -844 * 274 303 104 74 chr2 27477216 27477447 -223210407 - L2 LINE L2 0 3313 3076 292 83 42 0 chr2 27477633 27477681 -223210173 - Alu SINE Alu -4 297 248 21 0 0 0 chr2 27478064 27478085 -223209769 + AT_rich Low_complexity Low_complexity 1 21 0 2092 123 0 7 chr2 27478107 27478408 -223209446 - AluY SINE Alu -12 299 1 2232 91 3 7 chr2 27478421 27478719 -223209135 - AluSx SINE Alu -15 297 1 326 173 62 37 chr2 27478720 27478801 -223209053 + MER74B LTR ERVL 91 173 -449 2279 111 0 3 chr2 27478801 27479098 -223208756 - AluSx SINE Alu -16 296 1 1864 96 56 8 chr2 27479245 27479496 -223208358 - AluSc SINE Alu -46 263 1 283 269 212 60 chr2 27479720 27480304 -223207550 - L2 LINE L2 -1298 2016 1344 286 316 199 15 chr2 27480341 27480683 -223207171 - L2 LINE L2 -2136 1178 774 950 144 144 34 chr2 27480808 27481044 -223206810 + AluY SINE Alu 42 303 -8 26 0 0 0 chr2 27482620 27482646 -223205208 + AT_rich Low_complexity Low_complexity 1 26 0 713 76 0 0 chr2 27483252 27483344 -223204510 + AluSp/q SINE Alu 205 296 -17 2205 44 106 0 chr2 27483349 27483623 -223204231 + AluY SINE Alu 1 303 -8 27 0 0 0 chr2 27485205 27485232 -223202622 + AT_rich Low_complexity Low_complexity 1 27 0 2042 130 7 0 chr2 27486050 27486343 -223201511 - AluSp SINE Alu -17 296 2 238 173 24 4 chr2 27486345 27486395 -223201459 - MIR SINE MIR -59 149 98 2010 116 14 17 chr2 27486635 27486929 -223200925 - AluSg SINE Alu -17 293 1 1865 141 44 3 chr2 27487293 27487590 -223200264 - AluSx SINE Alu -3 309 1 2298 123 0 0 chr2 27487730 27488031 -223199823 - AluSq SINE Alu -12 301 1 614 71 0 0 chr2 27488042 27488126 -223199728 - L1PA6 LINE L1 -6 6148 6065 341 290 164 19 chr2 27488149 27488233 -223199621 - L1MC4 LINE L1 -31 8011 7941 2466 93 3 3 chr2 27488233 27488546 -223199308 - AluSp SINE Alu 0 313 1 341 290 164 19 chr2 27488546 27488668 -223199186 - L1MC4 LINE L1 -101 7941 7775 2280 113 7 7 chr2 27489087 27489397 -223198457 - AluSx SINE Alu -2 310 1 1735 163 13 49 chr2 27489402 27489560 -223198294 - AluJo SINE Alu -17 295 152 2268 106 0 7 chr2 27489560 27489862 -223197992 - AluSx SINE Alu -12 300 1 964 137 0 41 chr2 27489863 27490009 -223197845 - AluJo SINE Alu -172 140 1 966 181 33 0 chr2 27490125 27490307 -223197547 - MER5A DNA MER1_type -1 188 1 1796 123 11 0 chr2 27490433 27490693 -223197161 - AluSx SINE Alu -11 301 39 596 178 8 34 chr2 27490744 27490862 -223196992 - AluJo/FRAM SINE Alu -44 268 154 1477 190 7 19 chr2 27490746 27491015 -223196839 - AluJb SINE Alu -46 266 1 1281 167 0 33 chr2 27491072 27491282 -223196572 + AluJo SINE Alu 87 289 -23 2016 104 22 22 chr2 27491470 27491748 -223196106 + AluSx SINE Alu 1 278 -34 471 327 105 44 chr2 27491752 27492085 -223195769 - L1ME2 LINE L1 -267 5854 5496 278 248 90 21 chr2 27492086 27492231 -223195623 - L1ME2 LINE L1 -2330 5478 5324 2432 61 10 0 chr2 27492232 27492526 -223195328 + AluSq SINE Alu 1 297 -16 251 119 85 68 chr2 27492767 27492826 -223195028 - MER113 DNA MER1_type? -3 518 459 284 221 63 0 chr2 27492949 27493044 -223194810 - MER113 DNA MER1_type? -410 111 11 2180 112 3 0 chr2 27494176 27494462 -223193392 - AluSx SINE Alu -25 287 1 2269 73 4 0 chr2 27494824 27495131 -223192723 - AluSx SINE Alu 0 313 6 26 30 0 0 chr2 27495136 27495169 -223192685 + AT_rich Low_complexity Low_complexity 1 33 0 1412 188 108 42 chr2 27495430 27495614 -223192240 - MLT1D LTR MaLR 0 505 335 2174 91 31 7 chr2 27495614 27495901 -223191953 - AluSx SINE Alu -18 294 1 1412 188 108 42 chr2 27495901 27496094 -223191760 - MLT1D LTR MaLR -170 335 103 1294 99 0 0 chr2 27496127 27496317 -223191537 + AluSg/x SINE Alu 120 309 0 2005 122 14 0 chr2 27496318 27496614 -223191240 + AluSx SINE Alu 1 300 -12 284 292 44 51 chr2 27496940 27497077 -223190777 + MER5A DNA MER1_type 25 160 -29 992 171 6 12 chr2 27497357 27497521 -223190333 + FRAM SINE Alu 4 166 0 228 185 108 31 chr2 27497523 27497588 -223190266 - L1MB8 LINE L1 -44 6134 6065 839 126 57 34 chr2 27497670 27497845 -223190009 + L1M2 LINE L1 5126 5304 -842 1380 154 0 9 chr2 27497845 27498059 -223189795 + AluSx SINE Alu 1 212 -100 564 59 0 0 chr2 27498059 27498127 -223189727 + AluSp SINE Alu 78 145 -168 2284 108 3 16 chr2 27498127 27498443 -223189411 + AluSq SINE Alu 1 312 -1 1466 120 34 48 chr2 27498450 27498741 -223189113 + L1M2 LINE L1 5324 5610 -702 225 188 9 9 chr2 27499006 27499078 -223188776 + G-rich Low_complexity Low_complexity 1 72 0 2093 73 22 0 chr2 27499209 27499523 -223188331 + AluY SINE Alu 1 320 0 350 242 184 81 chr2 27499530 27499661 -223188193 - L1MC5 LINE L1 -469 7492 7376 2255 105 0 20 chr2 27499661 27499967 -223187887 - AluSx SINE Alu -12 300 1 350 242 184 81 chr2 27499967 27500058 -223187796 - L1MC5 LINE L1 -585 7376 7247 416 204 90 95 chr2 27500135 27500250 -223187604 - L1MC5 LINE L1 -737 7224 7109 2065 97 3 20 chr2 27500250 27500550 -223187304 + AluSx SINE Alu 3 297 -15 416 204 90 95 chr2 27500550 27500645 -223187209 - L1MC5 LINE L1 -852 7109 7015 243 88 0 0 chr2 27500660 27500694 -223187160 + (T)n Simple_repeat Simple_repeat 1 34 0 10856 32 9 106 chr2 27500725 27502259 -223185595 - SVA Other Other 0 1386 1 182 261 22 0 chr2 27502392 27502438 -223185416 - L2 LINE L2 -577 2737 2691 1210 192 81 37 chr2 27502440 27502736 -223185118 + AluJb SINE Alu 1 308 0 524 286 29 55 chr2 27502788 27503061 -223184793 + L1MC4a LINE L1 5589 5854 -1954 787 193 0 0 chr2 27503062 27503197 -223184657 + AluJo SINE Alu 2 136 -176 2428 72 7 0 chr2 27503197 27503502 -223184352 + AluSg SINE Alu 1 307 -3 822 114 0 18 chr2 27503502 27503616 -223184238 - AluJo/FLAM SINE Alu -200 112 1 195 42 0 0 chr2 27504506 27504530 -223183324 + (CGGGGG)n Simple_repeat Simple_repeat 4 27 0 423 118 15 15 chr2 27505566 27505634 -223182220 - FLAM_A SINE Alu -64 68 1 1826 146 36 7 chr2 27505926 27506228 -223181626 - AluSx SINE Alu -1 311 1 2030 97 3 31 chr2 27506498 27506788 -223181066 + AluSg SINE Alu 12 293 -17 391 289 0 11 chr2 27506914 27507004 -223180850 + L2 LINE L2 3225 3313 0 2373 106 0 0 chr2 27507315 27507617 -223180237 - AluSx SINE Alu -10 302 1 327 153 0 42 chr2 27507923 27507995 -223179859 - AluJo SINE Alu -166 136 68 1778 159 33 10 chr2 27508043 27508345 -223179509 - AluJo SINE Alu -3 309 1 2043 132 3 3 chr2 27508356 27508645 -223179209 - AluSg SINE Alu -21 289 1 447 270 50 117 chr2 27508720 27508891 -223178963 - L1MEd LINE L1 -4910 1209 1028 1756 131 0 117 chr2 27508891 27509243 -223178611 - AluJo SINE Alu -1 311 1 447 270 50 117 chr2 27509243 27509523 -223178331 - L1MEd LINE L1 -5091 1028 817 1765 153 14 14 chr2 27509523 27509804 -223178050 - AluJo SINE Alu -31 281 1 447 270 50 117 chr2 27509804 27510044 -223177810 - L1MEd LINE L1 -5302 817 563 2452 89 0 19 chr2 27511314 27511630 -223176224 + AluSg SINE Alu 1 310 0 3686 78 99 5 chr2 27511638 27512206 -223175648 + L1MA2 LINE L1 5328 5948 -356 2456 84 6 6 chr2 27512206 27512517 -223175337 + AluY SINE Alu 1 311 0 638 317 93 45 chr2 27512519 27512750 -223175104 + L1MEc LINE L1 1464 1719 -4677 2249 127 3 0 chr2 27512750 27513057 -223174797 + AluSx SINE Alu 1 308 -4 638 317 93 45 chr2 27513057 27513178 -223174676 + L1MEc LINE L1 1719 1833 -4563 2231 115 7 0 chr2 27513188 27513484 -223174370 + AluSx SINE Alu 1 298 -14 975 185 10 36 chr2 27513724 27513978 -223173876 + AluJo SINE Alu 123 371 0 2209 95 3 30 chr2 27515387 27515692 -223172162 + AluSx SINE Alu 2 298 -14 2335 94 3 10 chr2 27516724 27517033 -223170821 + AluSx SINE Alu 1 307 -5 1871 165 13 0 chr2 27517150 27517453 -223170401 + AluSx SINE Alu 1 307 -5 521 311 52 52 chr2 27517563 27517811 -223170043 + MIR SINE MIR 4 251 -11 1141 300 109 20 chr2 27517829 27518417 -223169437 + L2 LINE L2 2451 3140 -173 1405 59 99 63 chr2 27518417 27518639 -223169215 + MER30 DNA MER1_type 1 230 0 1141 300 109 20 chr2 27518639 27518830 -223169024 + L2 LINE L2 3140 3313 0 601 147 161 14 chr2 27519660 27519733 -223168121 - MER69A DNA AcHobo -2350 176 115 2106 112 3 7 chr2 27519733 27520027 -223167827 + AluSx SINE Alu 1 293 -19 601 147 161 14 chr2 27520027 27520096 -223167758 - MER69A DNA AcHobo -2411 115 13 8455 54 2 0 chr2 27521119 27522086 -223165768 - LTR5 LTR ERVK 0 969 1 2040 133 3 20 chr2 27524472 27524773 -223163081 - AluJb SINE Alu -16 296 1 2355 115 0 0 chr2 27524994 27525298 -223162556 - AluSx SINE Alu -8 304 1 2392 83 3 0 chr2 27525840 27526129 -223161725 - AluSc SINE Alu -19 290 1 2455 72 0 10 chr2 27526327 27526633 -223161221 - AluY SINE Alu -7 304 2 1393 210 80 70 chr2 27529199 27529216 -223158638 - MLT2B1 LTR ERVL -30 490 475 1303 197 41 90 chr2 27529216 27529582 -223158272 + MER7A DNA MER2_type 1 346 0 1393 210 80 70 chr2 27529582 27530049 -223157805 - MLT2B1 LTR ERVL -45 475 1 234 150 0 0 chr2 27530049 27530089 -223157765 + (TA)n Simple_repeat Simple_repeat 1 40 0 25 0 0 0 chr2 27530089 27530114 -223157740 + AT_rich Low_complexity Low_complexity 1 25 0 2289 73 0 11 chr2 27530251 27530575 -223157279 - AluY SINE Alu 0 321 1 849 107 43 130 chr2 27531002 27531167 -223156687 - Charlie5 DNA MER1_type 0 2585 2448 2173 128 0 3 chr2 27531167 27531465 -223156389 + AluSx SINE Alu 3 299 -13 849 107 43 130 chr2 27531465 27531552 -223156302 - Charlie5 DNA MER1_type -137 2448 2355 2497 80 0 10 chr2 27533658 27533972 -223153882 + AluY SINE Alu 1 311 0 196 244 0 0 chr2 27534871 27534912 -223152942 - L3b LINE CR1 -9 1574 1534 1974 115 0 77 chr2 27534918 27535058 -223152796 + AluSx SINE Alu 5 107 -205 2992 13 0 0 chr2 27535058 27535376 -223152478 + AluYb8 SINE Alu 1 318 0 1974 115 0 77 chr2 27535376 27535558 -223152296 + AluSx SINE Alu 107 302 -10 2367 98 0 3 chr2 27537110 27537406 -223150448 + AluSx SINE Alu 3 297 -15 2350 77 13 3 chr2 27538161 27538460 -223149394 - AluSx SINE Alu -10 302 1 202 259 0 0 chr2 27539487 27539541 -223148313 + (CGGGG)n Simple_repeat Simple_repeat 2 55 0 2197 124 16 0 chr2 27541743 27542050 -223145804 + AluSx SINE Alu 1 312 0 215 286 0 48 chr2 27542335 27542398 -223145456 + L2 LINE L2 3191 3250 -22 2543 57 7 0 chr2 27542546 27542845 -223145009 - AluY SINE Alu -10 301 1 2002 159 3 0 chr2 27543068 27543363 -223144491 - AluJb SINE Alu -6 306 11 2242 94 31 0 chr2 27543858 27544146 -223143708 - AluSx SINE Alu -15 297 1 2456 59 3 10 chr2 27544156 27544461 -223143393 - AluY SINE Alu -8 303 1 210 211 14 42 chr2 27544878 27544949 -223142905 + C-rich Low_complexity Low_complexity 3 71 0 2409 108 3 0 chr2 27548871 27549176 -223138678 + AluSx SINE Alu 1 306 -6 2664 202 125 45 chr2 27549199 27549868 -223137986 - L1MC4 LINE L1 -194 7848 7091 2203 125 10 0 chr2 27549868 27550172 -223137682 + AluSx SINE Alu 3 309 -3 2664 202 125 45 chr2 27550172 27550374 -223137480 - L1MC4 LINE L1 -951 7091 6907 322 246 110 8 chr2 27550408 27550526 -223137328 - L1MC4 LINE L1 -1877 5931 5802 351 0 0 0 chr2 27550527 27550566 -223137288 + (TG)n Simple_repeat Simple_repeat 2 40 0 946 232 30 38 chr2 27550617 27550884 -223136970 - L1MC4 LINE L1 -1164 6878 6614 210 204 0 20 chr2 27550884 27550933 -223136921 + (TA)n Simple_repeat Simple_repeat 2 49 0 1619 231 115 11 chr2 27551006 27551564 -223136290 - L1MC4a LINE L1 -1764 6044 5429 2219 115 7 0 chr2 27551564 27551893 -223135961 - AluSx SINE Alu 0 312 1 1668 167 14 14 chr2 27551893 27552181 -223135673 - AluJb SINE Alu -12 300 13 488 308 37 41 chr2 27552181 27552363 -223135491 - L1MC4a LINE L1 -1055 5091 4910 189 0 0 0 chr2 27552363 27552384 -223135470 + (TA)n Simple_repeat Simple_repeat 2 22 0 1866 152 0 42 chr2 27552384 27552694 -223135160 - AluJo SINE Alu -15 297 1 488 308 37 41 chr2 27552694 27552899 -223134955 - L1MC4a LINE L1 -1235 4911 4703 2329 118 0 13 chr2 27552899 27553213 -223134641 - AluSx SINE Alu -2 310 1 488 308 37 41 chr2 27553213 27553287 -223134567 - L1MC4a LINE L1 -1443 4703 4630 1947 102 0 4 chr2 27553632 27553886 -223133968 - AluSc SINE Alu -12 297 45 2163 101 24 43 chr2 27553886 27554262 -223133592 - THE1C LTR MaLR -6 369 1 362 298 57 32 chr2 27554497 27554655 -223133199 + MIR SINE MIR 36 197 -65 2072 142 0 0 chr2 27554668 27554964 -223132890 - AluSx SINE Alu -16 296 1 237 301 71 35 chr2 27554964 27555077 -223132777 - L2 LINE L2 -10 3303 3187 262 213 0 0 chr2 27555210 27555257 -223132597 - MER94 DNA DNA -16 118 72 1075 274 120 58 chr2 27555752 27555922 -223131932 - MLT1K LTR MaLR -2 586 428 2159 121 3 3 chr2 27555922 27556220 -223131634 - AluSx SINE Alu -14 298 1 1075 274 120 58 chr2 27556220 27556599 -223131255 - MLT1K LTR MaLR -160 428 3 627 172 144 58 chr2 27556607 27556781 -223131073 - MER53 DNA DNA 0 189 1 186 296 107 58 chr2 27556906 27557112 -223130742 - L2 LINE L2 -221 3051 2836 858 130 147 6 chr2 27557167 27557344 -223130510 + Charlie5 DNA MER1_type 1 202 -2410 1958 134 10 26 chr2 27557371 27557684 -223130170 + AluSx SINE Alu 1 308 -4 471 146 85 61 chr2 27557812 27557977 -223129877 + Charlie5 DNA MER1_type 2367 2535 -77 579 120 0 0 chr2 27557978 27558053 -223129801 + AluS SINE Alu 2 76 -235 2244 98 0 36 chr2 27558069 27558376 -223129478 - AluSx SINE Alu -16 296 1 409 101 81 111 chr2 27558376 27558445 -223129409 + Charlie5 DNA MER1_type 2490 2557 -28 2039 143 3 19 chr2 27558445 27558759 -223129095 - AluJo SINE Alu -3 309 1 409 101 81 111 chr2 27558759 27558788 -223129066 + Charlie5 DNA MER1_type 2557 2585 0 268 273 0 0 chr2 27559349 27559415 -223128439 - L2 LINE L2 -6 3307 3242 2299 95 3 13 chr2 27559628 27559934 -223127920 - AluSx SINE Alu -9 303 1 694 171 0 0 chr2 27562372 27562483 -223125371 + FLAM_A SINE Alu 28 138 -4 279 0 0 0 chr2 27562537 27562568 -223125286 + (CA)n Simple_repeat Simple_repeat 2 32 0 1801 174 3 10 chr2 27562673 27562972 -223124882 - AluJo SINE Alu -15 297 1 645 181 6 30 chr2 27563305 27563471 -223124383 + L1MC3 LINE L1 6797 6958 -827 1023 159 6 23 chr2 27563473 27563649 -223124205 + AluJb SINE Alu 136 308 -4 3007 183 39 41 chr2 27563669 27564490 -223123364 + L1MD3 LINE L1 6990 7995 0 1080 149 0 0 chr2 27564497 27564672 -223123182 + L1MA2 LINE L1 4048 4222 -1924 * 2989 121 10 10 chr2 27564660 27564672 -223123182 + L1MA2 LINE L1 4432 4443 -1703 2090 103 0 67 chr2 27564672 27564984 -223122870 - AluSg SINE Alu -16 294 4 2989 121 10 10 chr2 27564984 27565474 -223122380 + L1MA2 LINE L1 4442 4934 -1212 1732 149 129 18 chr2 27565474 27565847 -223122007 + MSTA LTR MaLR 1 414 -14 4524 114 70 40 chr2 27565847 27566153 -223121701 + L1MA2 LINE L1 4949 5244 -1060 204 40 0 0 chr2 27566153 27566178 -223121676 + (TA)n Simple_repeat Simple_repeat 2 26 0 4524 114 70 40 chr2 27566178 27566245 -223121609 + L1MA2 LINE L1 5244 5308 -996 2430 92 0 19 chr2 27566245 27566561 -223121293 + AluSg SINE Alu 1 310 0 4524 114 70 40 chr2 27566561 27567136 -223120718 + L1MA2 LINE L1 5308 5957 -347 2087 118 7 0 chr2 27567136 27567438 -223120416 + AluSx SINE Alu 1 304 0 4524 114 70 40 chr2 27567438 27567558 -223120296 + L1MA2 LINE L1 5957 6072 -232 1401 169 4 13 chr2 27567561 27567798 -223120056 + AluJb SINE Alu 5 239 -73 523 214 132 0 chr2 27568065 27568224 -223119630 + L1ME LINE L1 5461 5640 -524 2267 128 0 0 chr2 27568327 27568624 -223119230 + AluSx SINE Alu 1 297 -15 2158 123 0 41 chr2 27568802 27569118 -223118736 + AluSx SINE Alu 1 303 -9 286 283 22 11 chr2 27569248 27569340 -223118514 + CT-rich Low_complexity Low_complexity 3 95 0 30 0 0 0 chr2 27569747 27569777 -223118077 + AT_rich Low_complexity Low_complexity 1 30 0 1995 104 61 11 chr2 27569777 27570056 -223117798 + AluSg SINE Alu 1 293 -17 277 349 0 0 chr2 27572555 27572681 -223115173 + GA-rich Low_complexity Low_complexity 2 127 0 218 198 108 81 chr2 27573450 27573479 -223114375 - MIR SINE MIR -65 143 116 2429 77 0 46 chr2 27573479 27573806 -223114048 + AluSq SINE Alu 2 313 0 218 198 108 81 chr2 27573806 27573887 -223113967 - MIR SINE MIR -92 116 30 25 105 0 0 chr2 27575898 27575993 -223111861 + GC_rich Low_complexity Low_complexity 1 95 0 1972 97 0 0 chr2 27581164 27581411 -223106443 + AluY SINE Alu 1 247 -64 2321 95 3 0 chr2 27582939 27583233 -223104621 + AluSq SINE Alu 1 295 -18 304 245 61 150 chr2 27584337 27584434 -223103420 - MIR3 SINE MIR -11 197 116 2207 73 11 0 chr2 27584434 27584706 -223103148 + AluSq SINE Alu 16 290 -23 304 245 61 150 chr2 27584706 27584755 -223103099 - MIR3 SINE MIR -92 116 64 404 73 0 0 chr2 27585427 27585482 -223102372 - L1M LINE L1 -934 5378 5324 2258 109 3 16 chr2 27585489 27585802 -223102052 - AluSq SINE Alu -4 309 1 564 59 0 0 chr2 27585802 27585870 -223101984 - AluSp SINE Alu -168 145 78 1380 154 0 9 chr2 27585870 27586084 -223101770 - AluSx SINE Alu -100 212 1 856 121 63 35 chr2 27586084 27586258 -223101596 - L1 LINE L1 -842 5304 5126 228 185 108 31 chr2 27586340 27586405 -223101449 + L1MB8 LINE L1 6065 6134 -44 992 171 6 12 chr2 27586407 27586571 -223101283 - FRAM SINE Alu 0 166 4 284 292 44 51 chr2 27586851 27586988 -223100866 - MER5A DNA MER1_type -29 160 25 2044 133 10 0 chr2 27587303 27587612 -223100242 - AluSx SINE Alu 0 312 1 212 0 36 0 chr2 27587613 27587641 -223100213 + (TTG)n Simple_repeat Simple_repeat 1 29 0 1293 99 0 0 chr2 27587641 27587803 -223100051 - AluSg/x SINE Alu -31 279 118 596 161 207 42 chr2 27587836 27588029 -223099825 + MLT1D LTR MaLR 103 327 -178 2288 112 0 3 chr2 27588029 27588325 -223099529 + AluSx SINE Alu 1 295 -17 1555 150 28 12 chr2 27594980 27595233 -223092621 - AluJo SINE Alu -55 257 1 21 36 0 0 chr2 27595235 27595263 -223092591 + AT_rich Low_complexity Low_complexity 1 28 0 670 200 109 17 chr2 27595279 27595371 -223092483 + AluJo SINE Alu 13 95 -217 414 0 0 0 chr2 27595371 27595417 -223092437 + (CA)n Simple_repeat Simple_repeat 2 47 0 670 200 109 17 chr2 27595417 27595499 -223092355 + AluJo SINE Alu 95 203 -109 213 39 0 0 chr2 27595507 27595533 -223092321 + (CA)n Simple_repeat Simple_repeat 1 26 0 1086 157 0 3 chr2 27595533 27595568 -223092286 + AluJb SINE Alu 33 67 -245 198 0 0 0 chr2 27595568 27595590 -223092264 + (CA)n Simple_repeat Simple_repeat 2 23 0 1086 157 0 3 chr2 27595590 27595746 -223092108 + AluJb SINE Alu 67 293 -19 2474 74 0 0 chr2 27595952 27596250 -223091604 + AluY SINE Alu 1 298 -13 2309 90 0 32 chr2 27596263 27596573 -223091281 + AluSp SINE Alu 2 301 -12 190 260 80 0 chr2 27597457 27597507 -223090347 - L2 LINE L2 -14 3258 3205 1914 159 14 0 chr2 27597531 27597814 -223090040 + AluJb SINE Alu 1 287 -25 482 271 40 34 chr2 27597832 27597922 -223089932 - MIR SINE MIR -6 256 168 1992 121 64 0 chr2 27597922 27598204 -223089650 + AluSx SINE Alu 1 300 -12 482 271 40 34 chr2 27598204 27598290 -223089564 - MIR SINE MIR -94 168 79 558 218 0 24 chr2 27598317 27598441 -223089413 - MIR SINE MIR -139 123 3 899 110 103 0 chr2 27598767 27598912 -223088942 + MSTA LTR MaLR 268 427 -1 1956 116 7 3 chr2 27649048 27649351 -223038503 + AluSx SINE Alu 5 308 -4 25 51 0 0 chr2 27649871 27649910 -223037944 + GC_rich Low_complexity Low_complexity 1 39 0 860 273 71 33 chr2 27650458 27650657 -223037197 - L1MC/D LINE L1 -2160 5648 5458 1821 142 10 3 chr2 27650657 27650953 -223036901 + AluJo SINE Alu 1 298 -14 860 273 71 33 chr2 27650953 27651120 -223036734 - L1MC/D LINE L1 -2350 5458 5268 1495 189 43 0 chr2 27651131 27651411 -223036443 - AluJo SINE Alu -20 292 1 247 219 16 0 chr2 27651815 27651879 -223035975 + L1ME LINE L1 5713 5777 -344 1331 139 33 0 chr2 27651881 27652096 -223035758 + AluSc SINE Alu 1 222 -87 185 83 28 0 chr2 27652108 27652144 -223035710 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 306 0 0 0 chr2 27652158 27652192 -223035662 + (CAA)n Simple_repeat Simple_repeat 2 35 0 1740 171 0 10 chr2 27653789 27654094 -223033760 - AluJo SINE Alu -10 302 1 346 281 110 48 chr2 27654141 27654465 -223033389 - L1MC/D LINE L1 -1360 4786 4431 23 0 0 0 chr2 27654523 27654546 -223033308 + AT_rich Low_complexity Low_complexity 1 23 0 1360 171 0 0 chr2 27654563 27654797 -223033057 - AluSx SINE Alu -22 290 57 282 221 26 26 chr2 27655368 27655445 -223032409 - L2 LINE L2 -1 3271 3195 440 231 97 22 chr2 27655486 27655620 -223032234 - MIR SINE MIR -82 180 37 260 298 137 23 chr2 27656876 27657007 -223030847 - L2 LINE L2 -8 3305 3160 181 239 0 60 chr2 27657165 27657232 -223030622 + L2 LINE L2 1696 1758 -1556 2014 104 0 4 chr2 27657381 27657659 -223030195 + AluSg SINE Alu 1 277 -33 473 147 53 11 chr2 27657762 27657857 -223029997 - AluSg/x SINE Alu -6 306 208 404 212 0 62 chr2 27657916 27658095 -223029759 + C-rich Low_complexity Low_complexity 3 170 0 912 174 99 36 chr2 27658289 27658542 -223029312 - AluJo SINE Alu -43 269 1 333 47 0 0 chr2 27660293 27660336 -223027518 + (CA)n Simple_repeat Simple_repeat 1 43 0 189 321 67 61 chr2 27660407 27660445 -223027409 - L2 LINE L2 -22 3250 3214 228 67 0 0 chr2 27660445 27660475 -223027379 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 189 321 67 61 chr2 27660475 27660601 -223027253 - L2 LINE L2 -58 3214 3085 193 319 32 64 chr2 27660947 27661041 -223026813 - MIR3 SINE MIR -17 191 101 2004 105 3 10 chr2 27661123 27661418 -223026436 + AluSq SINE Alu 1 293 -20 25 51 0 0 chr2 27661454 27661493 -223026361 + AT_rich Low_complexity Low_complexity 1 39 0 1289 103 5 26 chr2 27662227 27662421 -223025433 + AluY SINE Alu 101 290 -21 24 0 0 0 chr2 27662421 27662445 -223025409 + AT_rich Low_complexity Low_complexity 1 24 0 2161 111 10 0 chr2 27662464 27662770 -223025084 - AluSg SINE Alu -1 309 1 712 282 75 34 chr2 27662921 27663279 -223024575 - HAL1 LINE L1 -440 2067 1695 1721 243 115 69 chr2 27663339 27664431 -223023423 - HAL1 LINE L1 -749 1758 616 3090 198 72 37 chr2 27664664 27664927 -223022927 - L1MC4 LINE L1 0 8042 7790 1571 147 11 39 chr2 27664927 27665212 -223022642 - AluJo SINE Alu -14 298 22 3090 198 72 37 chr2 27665212 27665792 -223022062 - L1MC4 LINE L1 -252 7790 7169 831 193 30 24 chr2 27665796 27665962 -223021892 - FRAM SINE Alu -9 167 1 644 296 53 14 chr2 27666213 27666429 -223021425 - MIR SINE MIR -21 241 16 548 300 78 33 chr2 27666998 27667178 -223020676 - MIR3 SINE MIR -4 204 17 433 243 176 91 chr2 27667224 27667520 -223020334 + MER102b DNA MER1_type 21 341 0 424 281 100 20 chr2 27668019 27668268 -223019586 - L2 LINE L2 -798 2516 2248 238 317 37 0 chr2 27669231 27669313 -223018541 - L2 LINE L2 -601 2713 2629 236 287 17 26 chr2 27669427 27669542 -223018312 + L1MC/D LINE L1 5772 5885 -2157 252 283 33 11 chr2 27669879 27669971 -223017883 + L1ME LINE L1 110 203 -5867 1268 268 62 49 chr2 27670332 27670918 -223016936 + L1ME LINE L1 391 989 -5081 2118 72 3 78 chr2 27670918 27671251 -223016603 + AluSg SINE Alu 3 310 0 1268 268 62 49 chr2 27671251 27671354 -223016500 + L1ME LINE L1 989 1089 -4981 4029 110 19 19 chr2 27671375 27672040 -223015814 + SVA Other Other 13 677 -709 892 83 38 0 chr2 27672145 27672277 -223015577 - AluSq/x SINE Alu -175 137 1 187 277 62 15 chr2 27672619 27672684 -223015170 + MIR SINE MIR 79 146 -116 1660 116 33 0 chr2 27672684 27672957 -223014897 - AluSx SINE Alu 0 315 35 222 91 0 0 chr2 27674024 27674057 -223013797 + (TG)n Simple_repeat Simple_repeat 2 34 0 245 208 228 30 chr2 27674754 27674855 -223012999 - L2 LINE L2 -2 3270 3150 580 256 8 0 chr2 27675060 27675185 -223012669 - MIR3 SINE MIR -48 160 35 203 356 13 13 chr2 27675716 27675865 -223011989 + C-rich Low_complexity Low_complexity 1 149 0 647 265 41 20 chr2 27676372 27676568 -223011286 - MIR SINE MIR -51 211 12 381 278 80 20 chr2 27677079 27677230 -223010624 - MIR SINE MIR 0 262 103 287 158 123 0 chr2 27677525 27677582 -223010272 - L1ME LINE L1 -456 5665 5602 1778 102 37 0 chr2 27677633 27677879 -223009975 - AluSx SINE Alu -46 266 12 667 252 105 58 chr2 27677892 27678253 -223009601 + L1ME4a LINE L1 5549 5926 -195 2107 108 10 0 chr2 27678324 27678629 -223009225 - AluSx SINE Alu -4 308 1 1084 218 36 45 chr2 27678725 27678869 -223008985 + L1MA4 LINE L1 5991 6135 -165 1592 133 23 77 chr2 27678869 27678998 -223008856 + AluSx SINE Alu 1 135 -172 2232 72 7 7 chr2 27678998 27679303 -223008551 + AluY SINE Alu 1 305 -6 1592 133 23 77 chr2 27679303 27679496 -223008358 + AluSx SINE Alu 135 307 0 1084 218 36 45 chr2 27679496 27679658 -223008196 + L1MA4 LINE L1 6135 6295 -5 1410 196 19 11 chr2 27679731 27679997 -223007857 - REP3 LTR ERV -294 268 1 314 214 21 100 chr2 27679999 27680043 -223007811 + HAL1 LINE L1 2303 2349 -158 1418 186 3 20 chr2 27680043 27680367 -223007487 + AluJb SINE Alu 1 319 0 314 214 21 100 chr2 27680367 27680459 -223007395 + HAL1 LINE L1 2349 2431 -76 * 379 153 0 0 chr2 27680449 27680508 -223007346 - L1M2 LINE L1 -535 5756 5698 * 725 236 75 80 chr2 27680502 27681001 -223006853 - L1MC5 LINE L1 -869 6939 6414 477 128 37 28 chr2 27681215 27681324 -223006530 + Alu SINE Alu 2 111 -200 242 299 153 28 chr2 27682033 27682177 -223005677 - MIR3 SINE MIR -32 176 15 261 283 160 0 chr2 27683500 27683606 -223004248 + L2 LINE L2 3142 3264 -8 232 270 54 40 chr2 27683637 27683711 -223004143 - L2 LINE L2 -13 3259 3185 472 299 148 27 chr2 27684564 27684895 -223002959 - L2 LINE L2 -3 3310 2940 2234 97 7 0 chr2 27685285 27685584 -223002270 - AluSx SINE Alu -11 301 1 340 170 19 0 chr2 27685700 27685753 -223002101 - Alu SINE Alu -246 55 2 1654 199 62 51 chr2 27685758 27686331 -223001523 - L1ME LINE L1 -483 5683 5069 2219 92 7 0 chr2 27686335 27686638 -223001216 - AluSx SINE Alu -7 305 1 1556 229 66 18 chr2 27686643 27687036 -223000818 - MLT1E2 LTR MaLR 0 626 215 639 183 14 21 chr2 27687038 27687180 -223000674 - MLT2C1 LTR ERVL -256 141 1 690 214 0 0 chr2 27687182 27687327 -223000527 - L1ME LINE L1 -1072 5074 4930 2094 125 0 0 chr2 27687349 27687645 -223000209 - AluSq SINE Alu -17 296 1 2205 107 0 3 chr2 27688806 27689116 -222998738 + AluSc SINE Alu 1 309 0 1717 125 3 56 chr2 27689427 27689565 -222998289 + AluSg SINE Alu 1 116 -194 1961 135 3 0 chr2 27689565 27689862 -222997992 + AluSq SINE Alu 1 298 -15 1717 125 3 56 chr2 27689862 27690026 -222997828 + AluSg SINE Alu 116 287 -23 189 0 0 0 chr2 27690035 27690056 -222997798 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1817 122 16 7 chr2 27690062 27690365 -222997489 + AluY SINE Alu 2 307 -4 1531 161 6 54 chr2 27690667 27690983 -222996871 - AluJb SINE Alu -11 301 1 754 218 18 12 chr2 27691865 27692030 -222995824 - MIR3 SINE MIR -7 201 36 199 0 0 0 chr2 27692696 27692718 -222995136 + (TTTG)n Simple_repeat Simple_repeat 2 108 0 2304 57 0 0 chr2 27692718 27693000 -222994854 - AluY SINE Alu -1 303 1 660 220 16 81 chr2 27694035 27694221 -222993633 - MIR3 SINE MIR -16 192 19 429 194 313 15 chr2 27694327 27694461 -222993393 - MER5A DNA MER1_type -12 177 4 508 307 56 6 chr2 27694474 27694653 -222993201 + MIR SINE MIR 29 216 -46 876 320 52 41 chr2 27694802 27695243 -222992611 - L2 LINE L2 -1 3271 2826 993 55 0 0 chr2 27695259 27695386 -222992468 + AluY SINE Alu 171 297 -14 2140 108 3 7 chr2 27696515 27696820 -222991034 + AluSx SINE Alu 1 304 -8 670 237 0 7 chr2 27697468 27697620 -222990234 - MIR SINE MIR -1 261 111 756 132 0 39 chr2 27697621 27697750 -222990104 - AluSg/x SINE Alu 0 309 186 1665 130 4 0 chr2 27697789 27698092 -222989762 + AluSc SINE Alu 25 328 0 313 287 11 11 chr2 27698094 27698181 -222989673 - MIR SINE MIR -161 101 15 1703 171 0 16 chr2 27698304 27698609 -222989245 + AluJo SINE Alu 1 300 -12 2074 133 3 0 chr2 27698618 27698927 -222988927 - AluSx SINE Alu -2 310 1 2062 121 0 3 chr2 27699975 27700272 -222987582 + AluSx SINE Alu 1 296 -16 2271 99 0 3 chr2 27701208 27701522 -222986332 + AluSq SINE Alu 1 313 0 2270 100 0 3 chr2 27701874 27702183 -222985671 + AluSx SINE Alu 5 312 0 330 233 133 11 chr2 27703274 27703364 -222984490 - L2 LINE L2 -1 3312 3212 1941 111 10 39 chr2 27703365 27703502 -222984352 + AluSc SINE Alu 1 140 -169 2185 95 3 0 chr2 27703502 27703798 -222984056 + AluSp SINE Alu 9 305 -8 1941 111 10 39 chr2 27703798 27703966 -222983888 + AluSc SINE Alu 140 297 -12 648 211 88 14 chr2 27704077 27704138 -222983716 - MER5A DNA MER1_type -3 186 131 1845 140 7 7 chr2 27704138 27704431 -222983423 + AluJo SINE Alu 1 293 -19 648 211 88 14 chr2 27704431 27704516 -222983338 - MER5A DNA MER1_type -58 131 29 1985 128 0 0 chr2 27704536 27704832 -222983022 - AluSx SINE Alu -16 296 1 360 196 38 15 chr2 27704853 27704935 -222982919 + MER5A DNA MER1_type 18 105 -80 326 276 0 58 chr2 27705861 27705948 -222981906 - L2 LINE L2 -7 3306 3225 1882 152 3 10 chr2 27705948 27706251 -222981603 - AluSx SINE Alu -10 302 2 306 306 27 54 chr2 27706495 27706606 -222981248 + MLT1K LTR MaLR 141 248 -340 26 50 0 0 chr2 27706630 27706670 -222981184 + AT_rich Low_complexity Low_complexity 1 40 0 28 61 0 0 chr2 27706795 27706844 -222981010 + AT_rich Low_complexity Low_complexity 1 49 0 598 321 62 22 chr2 27706879 27707277 -222980577 - L1MC4a LINE L1 -370 5987 5726 245 280 0 13 chr2 27707523 27707598 -222980256 + MLT1K LTR MaLR 500 573 -15 192 200 0 0 chr2 27707944 27707989 -222979865 + A-rich Low_complexity Low_complexity 1 45 0 194 289 66 86 chr2 27708345 27708497 -222979357 - MIR SINE MIR -33 229 81 492 233 0 0 chr2 27708893 27708979 -222978875 + L2 LINE L2 3223 3308 -5 283 234 47 111 chr2 27709475 27709631 -222978223 + MIR3 SINE MIR 51 192 -54 1967 126 3 0 chr2 27709638 27709953 -222977901 + AluSx SINE Alu 1 312 0 2141 130 0 0 chr2 27709955 27710263 -222977591 + AluSx SINE Alu 1 308 -4 888 150 21 42 chr2 27710828 27711021 -222976833 + MER53 DNA DNA 1 189 0 276 333 30 22 chr2 27711663 27711798 -222976056 + L2 LINE L2 2652 2787 -527 1758 155 0 7 chr2 27712745 27713042 -222974812 - AluSx SINE Alu -17 295 1 2151 96 10 0 chr2 27713141 27713444 -222974410 - AluSp SINE Alu -7 306 1 2624 198 112 105 chr2 27713446 27713720 -222974134 - L1MC4a LINE L1 -753 5629 5359 548 155 0 21 chr2 27713720 27713817 -222974037 + AluSg/x SINE Alu 212 306 -3 2624 198 112 105 chr2 27713817 27714656 -222973198 - L1MC4a LINE L1 -1023 5359 4411 4463 233 66 16 chr2 27714679 27716120 -222971734 - L1M4c LINE L1 -2599 3783 2303 614 152 124 35 chr2 27716135 27716280 -222971574 - AluJo SINE Alu -18 294 137 591 259 161 0 chr2 27716284 27716489 -222971365 - L1M4c LINE L1 -4598 1965 1728 1011 189 0 0 chr2 27716490 27716670 -222971184 - AluJo SINE Alu -1 311 132 23 0 0 29 chr2 27716672 27716687 -222971167 + AT_rich Low_complexity Low_complexity 1 15 -18 1365 74 16 0 chr2 27716687 27716877 -222970977 - L1MA1 LINE L1 0 6302 6110 23 0 0 29 chr2 27716877 27716895 -222970959 + AT_rich Low_complexity Low_complexity 15 33 0 2068 86 18 0 chr2 27716895 27717173 -222970681 - AluSc SINE Alu -26 283 1 798 117 36 0 chr2 27717180 27717291 -222970563 - AluJo SINE Alu -185 127 13 327 217 48 12 chr2 27717320 27717403 -222970451 - L1M4c LINE L1 -4706 1676 1591 1632 172 3 7 chr2 27717464 27717754 -222970100 - AluJb SINE Alu -23 289 1 1996 113 3 14 chr2 27717785 27718078 -222969776 - AluSx SINE Alu -22 290 1 2323 86 3 3 chr2 27718135 27718448 -222969406 - AluSp SINE Alu 0 313 1 1520 174 71 3 chr2 27718542 27718659 -222969195 + AluJb SINE Alu 1 109 -203 459 0 0 0 chr2 27718659 27718710 -222969144 + (CA)n Simple_repeat Simple_repeat 2 52 0 1520 174 71 3 chr2 27718710 27718874 -222968980 + AluJb SINE Alu 109 301 -11 1028 197 19 9 chr2 27718882 27719095 -222968759 + AluJo SINE Alu 83 297 -15 433 225 48 12 chr2 27719095 27719256 -222968598 - L1M4c LINE L1 -4851 1531 1273 2615 118 83 59 chr2 27719258 27719800 -222968054 - SVA Other Other -263 1123 569 2012 109 10 13 chr2 27719938 27720249 -222967605 + AluSq SINE Alu 1 310 -3 2368 82 7 0 chr2 27720258 27720563 -222967291 + AluSc SINE Alu 1 307 -2 1487 173 43 22 chr2 27720755 27721032 -222966822 + REP3 LTR ERV 263 545 -17 1510 277 153 35 chr2 27721098 27721926 -222965928 - HAL1 LINE L1 -300 2207 1243 521 64 13 0 chr2 27721926 27722004 -222965850 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 1510 277 153 35 chr2 27722004 27722162 -222965692 - HAL1 LINE L1 -1264 1243 1105 1010 177 0 0 chr2 27722168 27722332 -222965522 - FRAM SINE Alu -12 164 1 736 226 39 87 chr2 27722336 27722646 -222965208 - HAL1 LINE L1 -1423 1084 790 325 213 37 29 chr2 27723025 27723161 -222964693 + G-rich Low_complexity Low_complexity 5 141 0 1463 173 19 0 chr2 27723226 27723486 -222964368 - L1MA7 LINE L1 -69 6222 5958 439 227 98 0 chr2 27725170 27725333 -222962521 + L1ME4a LINE L1 5930 6108 -13 2106 110 0 3 chr2 27725334 27725624 -222962230 + AluSc SINE Alu 1 289 -20 186 71 0 0 chr2 27725686 27725714 -222962140 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1456 157 52 35 chr2 27725716 27726003 -222961851 - AluJo SINE Alu -20 292 1 721 302 43 21 chr2 27726024 27726259 -222961595 - MIR SINE MIR 0 262 23 2494 67 0 0 chr2 27726338 27726650 -222961204 + AluSq SINE Alu 1 312 -1 988 182 0 0 chr2 27726650 27726820 -222961034 + AluSg/x SINE Alu 133 302 -8 467 204 0 82 chr2 27726828 27726852 -222961002 - L1MC4 LINE L1 -5 8037 8013 2933 65 16 5 chr2 27726852 27727223 -222960631 - THE1C LTR MaLR 0 375 1 467 204 0 82 chr2 27727223 27727345 -222960509 - L1MC4 LINE L1 -29 8013 7903 189 0 0 0 chr2 27727351 27727372 -222960482 + (TTA)n Simple_repeat Simple_repeat 3 23 0 361 170 7 92 chr2 27727373 27727468 -222960386 - L1ME1 LINE L1 -54 6112 6010 1794 134 39 16 chr2 27727468 27727773 -222960081 + AluJo SINE Alu 1 312 0 361 170 7 92 chr2 27727773 27728255 -222959599 - L1ME1 LINE L1 -156 6010 5587 1257 176 178 33 chr2 27728260 27728619 -222959235 - L1MC4 LINE L1 -131 7911 7501 231 36 0 0 chr2 27729945 27729973 -222957881 + (TAA)n Simple_repeat Simple_repeat 2 29 0 693 282 75 25 chr2 27729974 27730215 -222957639 - MIR SINE MIR -8 254 2 2028 158 47 30 chr2 27730227 27730633 -222957221 - L1MC1 LINE L1 -5 6328 5916 1619 178 3 10 chr2 27730643 27730936 -222956918 - AluJo SINE Alu -21 291 1 1824 162 7 0 chr2 27731077 27731380 -222956474 + AluJb SINE Alu 1 305 -7 365 262 90 33 chr2 27732524 27732646 -222955208 + MIR SINE MIR 106 234 -28 2112 121 26 9 chr2 27732732 27733071 -222954783 - L1MC1 LINE L1 0 6333 5989 221 256 158 65 chr2 27733114 27733360 -222954494 + L2 LINE L2 3034 3302 -11 337 282 51 54 chr2 27734132 27734198 -222953656 - MIR3 SINE MIR -57 151 86 2004 132 10 0 chr2 27734198 27734502 -222953352 + AluSx SINE Alu 3 309 -3 337 282 51 54 chr2 27734502 27734611 -222953243 - MIR3 SINE MIR -122 86 6 211 183 17 52 chr2 27735003 27735118 -222952736 + (CATATA)n Simple_repeat Simple_repeat 3 113 0 1832 86 10 66 chr2 27735140 27735195 -222952659 - L1PB2 LINE L1 -1 6150 6093 798 135 16 24 chr2 27735195 27735321 -222952533 - FLAM_C SINE Alu -5 128 4 1832 86 10 66 chr2 27735321 27735569 -222952285 - L1PB2 LINE L1 -58 6093 5864 341 223 45 0 chr2 27735580 27735692 -222952162 - MER113 DNA MER1_type? -400 121 5 238 299 72 28 chr2 27735726 27735845 -222952009 + MIR SINE MIR 38 163 -66 2020 105 7 7 chr2 27736542 27736837 -222951017 - AluSx SINE Alu -17 295 1 226 250 0 0 chr2 27736946 27736994 -222950860 - L2 LINE L2 0 3313 3266 299 319 72 18 chr2 27737888 27738054 -222949800 + MIR3 SINE MIR 12 186 -22 637 319 73 18 chr2 27738316 27738645 -222949209 + L2 LINE L2 2897 3243 -70 364 268 27 27 chr2 27738705 27738817 -222949037 - MIR SINE MIR -56 206 95 882 174 0 0 chr2 27746425 27746569 -222941285 + MER3 DNA MER1_type 1 144 -65 1228 169 40 0 chr2 27746615 27746816 -222941038 + MER3 DNA MER1_type 1 209 0 385 328 195 22 chr2 27747107 27747692 -222940162 - L2 LINE L2 0 3272 2596 215 269 51 13 chr2 27747908 27747986 -222939868 - L2 LINE L2 -1036 2278 2198 225 324 65 53 chr2 27748043 27748213 -222939641 + MER5B DNA MER1_type 1 172 -6 1499 171 22 4 chr2 27748883 27749190 -222938664 - AluSx SINE Alu 0 315 4 207 264 81 11 chr2 27749420 27749507 -222938347 - MIR SINE MIR -169 93 1 279 247 71 0 chr2 27750402 27750487 -222937367 + MIR SINE MIR 162 252 -10 1121 119 6 62 chr2 27750607 27750783 -222937071 - AluSp SINE Alu -147 166 1 542 306 110 5 chr2 27751790 27751999 -222935855 + MIR SINE MIR 13 243 -19 288 263 86 91 chr2 27752544 27752776 -222935078 + MIR SINE MIR 2 232 -30 2024 87 13 33 chr2 27753112 27753269 -222934585 - AluSx SINE Alu -19 293 143 2167 99 7 7 chr2 27753269 27753572 -222934282 - AluSp SINE Alu -5 308 6 2024 87 13 33 chr2 27753572 27753713 -222934141 - AluSx SINE Alu -169 143 1 30 27 0 0 chr2 27755166 27755203 -222932651 + AT_rich Low_complexity Low_complexity 1 37 0 1754 150 16 33 chr2 27755220 27755527 -222932327 - AluJo SINE Alu -10 302 1 210 37 0 0 chr2 27755528 27755555 -222932299 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 2247 101 0 0 chr2 27755569 27755856 -222931998 - AluSx SINE Alu -25 287 1 1029 220 24 65 chr2 27755946 27756128 -222931726 - L1ME1 LINE L1 -5 6161 6059 1846 169 10 0 chr2 27756128 27756424 -222931430 + AluJo SINE Alu 1 299 -13 1029 220 24 65 chr2 27756424 27756568 -222931286 - L1ME1 LINE L1 -107 6059 5911 348 310 54 0 chr2 27757530 27757659 -222930195 - L2 LINE L2 0 3272 3137 258 304 7 34 chr2 27757687 27757835 -222930019 - L1M4 LINE L1 -3655 2491 2348 891 179 43 16 chr2 27757837 27758021 -222929833 + L1MC4a LINE L1 5744 5932 -1876 2426 91 0 3 chr2 27758078 27758387 -222929467 + AluY SINE Alu 1 308 -3 1792 137 37 7 chr2 27758423 27758723 -222929131 + L1MA9 LINE L1 5994 6302 -10 21 71 0 0 chr2 27758754 27758796 -222929058 + AT_rich Low_complexity Low_complexity 1 42 0 1699 126 4 0 chr2 27758934 27759188 -222928666 - AluY SINE Alu -16 295 41 374 213 197 27 chr2 27760429 27760612 -222927242 - HAL1b LINE L1 0 1348 1135 1043 148 6 0 chr2 27760624 27760786 -222927068 - AluJb SINE Alu -16 296 134 2072 139 3 3 chr2 27760786 27761089 -222926765 - AluSx SINE Alu -9 303 1 933 235 68 9 chr2 27761103 27761324 -222926530 - L1MB7 LINE L1 0 6184 5951 * 1141 198 8 32 chr2 27761297 27761550 -222926304 - L1MB7 LINE L1 -611 5567 5321 1049 153 11 11 chr2 27761618 27761795 -222926059 - L1MB8 LINE L1 -6 6172 5996 212 194 0 0 chr2 27762593 27762629 -222925225 + T-rich Low_complexity Low_complexity 1 36 0 1434 159 8 16 chr2 27762867 27763118 -222924736 + AluJo SINE Alu 21 269 -43 1836 154 7 3 chr2 27763245 27763538 -222924316 + AluJb SINE Alu 1 294 -18 1838 123 74 0 chr2 27763785 27764083 -222923771 - AluSx SINE Alu 0 318 1 754 177 8 0 chr2 27764165 27764289 -222923565 - FLAM_C SINE Alu -7 126 2 578 93 10 31 chr2 27764289 27764315 -222923539 + L1MA9 LINE L1 6209 6234 -78 2009 144 84 72 chr2 27764315 27764744 -222923110 - Tigger2a DNA MER2_type 0 434 1 578 93 10 31 chr2 27764744 27764814 -222923040 + L1MA9 LINE L1 6234 6303 -9 421 39 0 0 chr2 27764873 27764925 -222922929 - L1MA9 LINE L1 0 6312 6261 252 225 0 79 chr2 27764933 27764995 -222922859 + MIR SINE MIR 175 230 -32 1274 170 83 0 chr2 27764995 27765213 -222922641 + MER46A DNA MER2_type 1 236 0 252 225 0 79 chr2 27765213 27765239 -222922615 + MIR SINE MIR 230 256 -6 1530 189 6 26 chr2 27766820 27767132 -222920722 - AluJo SINE Alu -6 306 1 992 211 21 5 chr2 27767656 27767850 -222920004 - MER58A DNA MER1_type 0 224 28 285 188 71 59 chr2 27767852 27767937 -222919917 + MIR SINE MIR 167 252 -10 1598 183 3 20 chr2 27768906 27769206 -222918648 - AluJb SINE Alu -17 295 1 2146 97 47 7 chr2 27769872 27770172 -222917682 - AluSp SINE Alu -1 312 1 26 0 0 27 chr2 27770248 27770266 -222917588 + AT_rich Low_complexity Low_complexity 1 18 -18 354 98 0 0 chr2 27770266 27770317 -222917537 + (CA)n Simple_repeat Simple_repeat 2 52 0 26 0 0 27 chr2 27770317 27770335 -222917519 + AT_rich Low_complexity Low_complexity 18 36 0 38 0 0 0 chr2 27770481 27770519 -222917335 + AT_rich Low_complexity Low_complexity 1 38 0 2722 179 88 64 chr2 27770530 27771204 -222916650 - L1MC4 LINE L1 -14 8028 7331 2172 96 17 17 chr2 27771204 27771506 -222916348 + AluSx SINE Alu 1 302 -10 2722 179 88 64 chr2 27771506 27771628 -222916226 - L1MC4 LINE L1 -711 7331 7213 444 279 61 47 chr2 27771657 27772016 -222915838 - L1M4 LINE L1 -905 5241 4878 486 165 124 0 chr2 27772031 27772128 -222915726 - FLAM_A SINE Alu -6 136 28 2228 110 0 0 chr2 27772774 27773065 -222914789 - AluSx SINE Alu -21 291 1 380 217 30 74 chr2 27773073 27773276 -222914578 - L1M4 LINE L1 -1719 4427 4234 1472 204 14 0 chr2 27774960 27775249 -222912605 + AluJo SINE Alu 2 294 -18 1842 114 8 8 chr2 27775367 27775631 -222912223 - AluSq SINE Alu -23 290 27 1729 132 45 0 chr2 27775731 27775996 -222911858 - AluSx SINE Alu -18 294 18 266 246 127 17 chr2 27776145 27776263 -222911591 - L1MC4a LINE L1 -1737 6071 5941 * 470 128 216 0 chr2 27776257 27776359 -222911495 - L1MD3 LINE L1 0 7995 7872 6450 187 70 73 chr2 27776365 27776838 -222911016 - L1MC4a LINE L1 -220 7588 7115 2047 105 42 0 chr2 27776838 27777124 -222910730 - AluSg SINE Alu -12 298 1 6450 187 70 73 chr2 27777124 27778354 -222909500 - L1MC4a LINE L1 -693 7115 5883 2192 98 3 3 chr2 27778354 27778639 -222909215 + AluSc SINE Alu 1 285 -24 6450 187 70 73 chr2 27778639 27778662 -222909192 - L1MC4a LINE L1 -1925 5883 5861 1376 208 13 0 chr2 27778662 27778898 -222908956 + MER8 DNA MER2_type 1 239 0 6450 187 70 73 chr2 27778898 27778995 -222908859 - L1MC4a LINE L1 -1947 5861 5768 23 0 0 0 chr2 27779062 27779085 -222908769 + AT_rich Low_complexity Low_complexity 1 23 0 1264 35 0 0 chr2 27779690 27779832 -222908022 + AluY SINE Alu 158 299 -12 24 0 0 0 chr2 27779943 27779967 -222907887 + AT_rich Low_complexity Low_complexity 1 24 0 184 243 0 0 chr2 27780419 27780456 -222907398 - L2 LINE L2 0 3313 3277 1169 272 142 36 chr2 27780458 27780951 -222906903 - MLT1H1 LTR MaLR 0 555 11 940 150 39 0 chr2 27782905 27783058 -222904796 + FRAM SINE Alu 4 162 -14 1864 112 108 0 chr2 27783087 27783356 -222904498 - AluSx SINE Alu -14 298 1 901 240 115 6 chr2 27783521 27783844 -222904010 + L1MC4 LINE L1 7693 8041 -1 2250 74 32 0 chr2 27784264 27784547 -222903307 + AluSx SINE Alu 1 292 -20 1322 230 80 40 chr2 27784770 27785177 -222902677 - L1MC5 LINE L1 -30 7931 7497 1192 165 104 17 chr2 27785177 27785474 -222902380 - MER33 DNA MER1_type 0 324 2 1322 230 80 40 chr2 27785474 27785593 -222902261 - L1MC5 LINE L1 -464 7497 7384 368 86 35 0 chr2 27785646 27785704 -222902150 - MER31A LTR ERV1 -73 412 353 233 165 77 132 chr2 27785715 27785806 -222902048 - L1MC5 LINE L1 -602 7359 7274 508 262 44 1 chr2 27785817 27785949 -222901905 - MIR SINE MIR -55 153 9 610 275 47 19 chr2 27788690 27788901 -222898953 + L1ME LINE L1 5523 5739 -431 653 263 111 31 chr2 27789017 27789306 -222898548 + MLT1J2 LTR MaLR 110 421 -29 290 145 101 14 chr2 27789325 27789394 -222898460 + L1ME LINE L1 5743 5817 -345 1703 184 7 13 chr2 27789440 27789739 -222898115 + AluJb SINE Alu 1 297 -15 613 290 158 55 chr2 27789764 27790273 -222897581 + L2 LINE L2 2446 3051 -262 31 0 0 0 chr2 27791222 27791253 -222896601 + AT_rich Low_complexity Low_complexity 1 31 0 1188 142 5 87 chr2 27791834 27792053 -222895801 + AluSg/x SINE Alu 89 289 -21 270 204 0 0 chr2 27792054 27792103 -222895751 + MER5B DNA MER1_type 126 174 -4 1516 149 29 18 chr2 27793971 27794117 -222893737 - AluSx SINE Alu -28 284 132 2039 86 13 57 chr2 27794117 27794431 -222893423 - AluY SINE Alu -11 300 1 1516 149 29 18 chr2 27794431 27794565 -222893289 - AluSx SINE Alu -180 132 1 364 271 51 132 chr2 27794690 27794963 -222892891 - L2 LINE L2 0 3313 3063 239 286 0 18 chr2 27795002 27795058 -222892796 - MIR SINE MIR -133 75 21 875 55 0 0 chr2 27795350 27795459 -222892395 - AluSx SINE Alu -1 311 203 940 117 0 0 chr2 27795459 27795587 -222892267 - AluSx SINE Alu -173 140 13 281 309 0 36 chr2 27795787 27795871 -222891983 + MIR SINE MIR 20 100 -162 217 263 79 0 chr2 27795900 27795976 -222891878 - L2 LINE L2 -32 3281 3200 310 257 0 66 chr2 27796636 27796819 -222891035 + A-rich Low_complexity Low_complexity 2 172 0 372 307 24 18 chr2 27797800 27797966 -222889888 + L3b LINE CR1 1223 1389 -194 27 0 0 0 chr2 27798234 27798261 -222889593 + AT_rich Low_complexity Low_complexity 1 27 0 818 188 43 81 chr2 27798284 27798518 -222889336 - AluJo SINE Alu -86 226 2 189 0 0 0 chr2 27798564 27798585 -222889269 + (T)n Simple_repeat Simple_repeat 1 21 0 223 330 124 0 chr2 27799296 27799393 -222888461 + MER5B DNA MER1_type 2 110 -68 249 57 0 0 chr2 27799631 27799666 -222888188 + (TG)n Simple_repeat Simple_repeat 1 35 0 2236 104 7 0 chr2 27799746 27800045 -222887809 - AluSp SINE Alu -12 301 1 21 0 0 0 chr2 27800904 27800925 -222886929 + AT_rich Low_complexity Low_complexity 1 21 0 930 176 43 16 chr2 27801524 27801712 -222886142 - L1ME LINE L1 -347 5819 5627 587 155 176 7 chr2 27803039 27803181 -222884673 + MER5A DNA MER1_type 2 167 -22 310 287 157 0 chr2 27803478 27803593 -222884261 + L2 LINE L2 3139 3271 -1 2166 96 10 14 chr2 27803685 27804001 -222883853 + AluSx SINE Alu 1 312 0 2299 78 7 7 chr2 27806391 27806685 -222881169 - AluY SINE Alu -17 294 1 354 237 0 26 chr2 27806859 27806935 -222880919 - 7SK RNA RNA -94 99 26 1353 186 119 7 chr2 27807722 27807991 -222879863 + AluJb SINE Alu 1 299 -13 680 164 0 0 chr2 27808260 27808364 -222879490 - FLAM_A SINE Alu -7 135 32 1806 167 3 23 chr2 27808452 27808758 -222879096 - AluJo SINE Alu -12 300 1 288 223 248 16 chr2 27808777 27808898 -222878956 + L2 LINE L2 3160 3308 -5 309 258 202 48 chr2 27810088 27810212 -222877642 - MIR SINE MIR -99 163 21 1006 183 163 133 chr2 27811171 27811771 -222876083 + L1MC4 LINE L1 7425 8042 0 624 218 160 0 chr2 27811862 27812018 -222875836 - MER5A DNA MER1_type 0 189 9 1863 154 31 7 chr2 27812050 27812343 -222875511 - AluSx SINE Alu -12 300 1 23 0 0 0 chr2 27812476 27812499 -222875355 + AT_rich Low_complexity Low_complexity 1 23 0 353 250 60 10 chr2 27812504 27812604 -222875250 + L2 LINE L2 3190 3294 -19 391 265 78 36 chr2 27812606 27812772 -222875082 + MIR SINE MIR 20 192 -70 297 215 56 47 chr2 27813811 27813918 -222873936 + L2 LINE L2 2610 2717 -597 184 381 58 7 chr2 27814227 27814366 -222873488 + L2 LINE L2 2866 3011 -261 598 219 214 14 chr2 27814551 27814596 -222873258 - MIR SINE MIR -3 259 224 1797 146 7 23 chr2 27814596 27814904 -222872950 - AluJo SINE Alu -9 303 1 598 219 214 14 chr2 27814904 27815073 -222872781 - MIR SINE MIR -38 224 2 327 242 16 65 chr2 27815148 27815334 -222872520 + C-rich Low_complexity Low_complexity 2 178 0 1653 125 49 28 chr2 27816930 27817218 -222870636 + AluJo SINE Alu 1 294 -18 189 261 0 0 chr2 27817591 27817637 -222870217 - MIR SINE MIR -65 143 98 24 0 0 0 chr2 27817673 27817697 -222870157 + AT_rich Low_complexity Low_complexity 1 24 0 30 45 0 0 chr2 27817727 27817771 -222870083 + AT_rich Low_complexity Low_complexity 1 44 0 1571 145 152 7 chr2 27818148 27818431 -222869423 + MER33 DNA MER1_type 1 324 0 1062 97 0 0 chr2 27818451 27818585 -222869269 - AluSg SINE Alu -176 134 1 24 32 0 0 chr2 27819182 27819213 -222868641 + AT_rich Low_complexity Low_complexity 1 31 0 223 150 33 0 chr2 27819250 27819310 -222868544 + (TA)n Simple_repeat Simple_repeat 2 63 0 2372 54 10 7 chr2 27819567 27819863 -222867991 - AluY SINE Alu -14 297 1 1774 169 0 0 chr2 27819871 27820155 -222867699 - AluJb SINE Alu -20 292 9 1956 122 7 14 chr2 27821117 27821270 -222866584 - AluSx SINE Alu -25 287 135 2417 88 3 0 chr2 27821270 27821576 -222866278 - AluSp SINE Alu -6 307 1 1956 122 7 14 chr2 27821576 27821710 -222866144 - AluSx SINE Alu -177 135 2 1030 157 6 34 chr2 27822074 27822252 -222865602 - AluJo SINE Alu -52 260 88 384 40 0 0 chr2 27822560 27822610 -222865244 + (TG)n Simple_repeat Simple_repeat 1 50 0 338 379 17 17 chr2 27822642 27822816 -222865038 - MLT1K LTR MaLR -210 378 205 512 225 99 0 chr2 27822970 27823081 -222864773 - L1MC/D LINE L1 -2151 5657 5536 31 76 0 0 chr2 27823128 27823194 -222864660 + AT_rich Low_complexity Low_complexity 1 66 0 1984 97 30 4 chr2 27823283 27823550 -222864304 - AluSq SINE Alu -15 298 25 1737 165 47 6 chr2 27823639 27823961 -222863893 - L1MB3 LINE L1 -7 6176 5842 31 76 0 0 chr2 27824291 27824357 -222863497 + AT_rich Low_complexity Low_complexity 1 66 0 232 313 47 0 chr2 27824454 27824518 -222863336 - L3 LINE CR1 -964 613 547 406 299 125 0 chr2 27824734 27824918 -222862936 + L1MC/D LINE L1 5451 5657 -2151 2139 120 0 26 chr2 27825109 27825417 -222862437 + AluSx SINE Alu 1 300 -12 2223 116 0 0 chr2 27825428 27825722 -222862132 + AluSc SINE Alu 1 294 -15 243 301 41 0 chr2 27825942 27826015 -222861839 - L2 LINE L2 -9 3304 3229 406 315 9 0 chr2 27826061 27826169 -222861685 - MIR3 SINE MIR -21 187 79 2322 97 3 0 chr2 27827675 27827975 -222859879 - AluSc SINE Alu -8 301 1 368 239 138 16 chr2 27828219 27828380 -222859474 - MIR SINE MIR -67 141 16 1464 167 158 40 chr2 27828484 27828832 -222859022 - MLT1B LTR MaLR -1 389 1 1658 108 19 19 chr2 27828889 27829147 -222858707 - AluSg SINE Alu -10 300 43 2141 111 3 7 chr2 27829779 27830077 -222857777 + AluSx SINE Alu 3 299 -13 243 188 0 0 chr2 27830735 27830783 -222857071 + GA-rich Low_complexity Low_complexity 2 49 0 267 319 86 17 chr2 27831326 27831442 -222856412 + L2 LINE L2 3146 3269 -3 342 227 76 15 chr2 27831513 27831645 -222856209 - L1ME4a LINE L1 -6 6115 5976 1958 124 13 29 chr2 27832115 27832422 -222855432 + AluSx SINE Alu 1 302 -10 500 220 0 25 chr2 27832484 27832602 -222855252 - AluJ SINE Alu 0 312 198 809 136 0 17 chr2 27832614 27832732 -222855122 - AluJ SINE Alu -194 118 3 660 264 50 50 chr2 27832765 27832931 -222854923 - L1ME4a LINE L1 -266 5855 5687 1753 166 0 27 chr2 27832931 27833226 -222854628 + AluJo SINE Alu 1 287 -25 660 264 50 50 chr2 27833226 27833339 -222854515 - L1ME4a LINE L1 -433 5688 5576 344 260 72 28 chr2 27834604 27834740 -222853114 - L1MC4a LINE L1 -1795 6013 5866 216 0 0 0 chr2 27834740 27834764 -222853090 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 344 260 72 28 chr2 27834764 27834808 -222853046 - L1MC4a LINE L1 -1942 5866 5825 357 207 47 38 chr2 27834825 27834931 -222852923 - L1MC4a LINE L1 -409 5753 5668 3161 175 22 2 chr2 27834954 27835498 -222852356 - MER68 LTR ERV1 0 562 8 293 246 14 0 chr2 27835519 27835588 -222852266 - L1MC4a LINE L1 -2226 5582 5513 2243 118 16 3 chr2 27835794 27836100 -222851754 - L1PB3 LINE L1 -12 6142 5833 1473 167 4 16 chr2 27836101 27836359 -222851495 - AluJo SINE Alu -1 311 57 6460 176 21 150 chr2 27836359 27837216 -222850638 - L1 LINE L1 -2204 3942 2976 2021 143 10 3 chr2 27837216 27837516 -222850338 - AluSx SINE Alu -10 302 1 6460 176 21 150 chr2 27837516 27837592 -222850262 - L1 LINE L1 -3170 2976 2892 189 0 0 0 chr2 27837592 27837613 -222850241 + (TC)n Simple_repeat Simple_repeat 2 22 0 850 153 0 0 chr2 27837621 27837739 -222850115 - FLAM_C SINE Alu -25 118 1 6460 176 21 150 chr2 27837739 27838698 -222849156 - L1 LINE L1 -3261 2885 2254 2098 112 18 0 chr2 27838698 27839002 -222848852 - AluSx SINE Alu 0 309 1 6460 176 21 150 chr2 27839002 27839420 -222848434 - L1 LINE L1 -3892 2254 1784 629 202 71 60 chr2 27839607 27839874 -222847980 + L1MC5 LINE L1 7509 7778 -183 383 217 94 83 chr2 27839987 27840148 -222847706 - L1MC/D LINE L1 -478 5643 5497 1648 144 0 34 chr2 27840749 27841039 -222846815 - AluJo SINE Alu 0 309 29 1717 134 29 76 chr2 27841044 27841358 -222846496 - AluJb SINE Alu -11 301 3 328 303 23 68 chr2 27842494 27842626 -222845228 + MIR SINE MIR 81 206 -56 248 170 21 0 chr2 27842684 27842731 -222845123 + MIR3 SINE MIR 113 160 -48 427 190 25 165 chr2 27842731 27842871 -222844983 - MER5B DNA MER1_type 0 178 73 1696 188 7 3 chr2 27842871 27843163 -222844691 - AluJb SINE Alu -17 295 3 427 190 25 165 chr2 27843163 27843222 -222844632 - MER5B DNA MER1_type -105 73 7 876 210 97 0 chr2 27843247 27843442 -222844412 - MER58A DNA MER1_type -10 214 1 688 277 167 53 chr2 27843753 27843814 -222844040 - L2 LINE L2 -543 2771 2718 2402 72 7 0 chr2 27843814 27844106 -222843748 - AluSg SINE Alu -16 294 1 688 277 167 53 chr2 27844106 27844517 -222843337 - L2 LINE L2 -596 2718 2245 23 0 0 0 chr2 28045300 28045323 -222642531 + AT_rich Low_complexity Low_complexity 1 23 0 4921 125 11 28 chr2 28046179 28047314 -222640540 - L1P4 LINE L1 -392 5776 4623 2159 129 0 0 chr2 28047314 28047632 -222640222 - AluSx SINE Alu 0 318 1 1484 204 39 0 chr2 28047635 28047795 -222640059 - AluJb SINE Alu -22 290 113 282 87 0 0 chr2 28047795 28047841 -222640013 + (TTTG)n Simple_repeat Simple_repeat 1 46 0 1484 204 39 0 chr2 28047841 28047959 -222639895 - AluJb SINE Alu -199 113 1 4921 125 11 28 chr2 28047959 28048214 -222639640 - L1P4 LINE L1 -1547 4621 4402 1231 212 0 4 chr2 28048604 28048859 -222638995 - AluJb SINE Alu -54 258 5 1707 140 22 14 chr2 28048925 28049203 -222638651 - AluJo SINE Alu -21 291 12 396 165 10 41 chr2 28049419 28049516 -222638338 - MLT1F LTR MaLR -61 481 388 37 0 0 0 chr2 28049708 28049745 -222638109 + AT_rich Low_complexity Low_complexity 1 37 0 252 237 92 13 chr2 28049778 28049854 -222638000 - L2 LINE L2 -10 3303 3222 1019 238 70 8 chr2 28050807 28051051 -222636803 - MIR SINE MIR 0 262 4 365 273 30 0 chr2 28051998 28052097 -222635757 - L2 LINE L2 -2 3270 3169 202 308 112 37 chr2 28053019 28053126 -222634728 - L2 LINE L2 0 3313 3199 2173 116 0 0 chr2 28053208 28053502 -222634352 + AluSc SINE Alu 1 294 -15 2398 86 0 0 chr2 28053769 28054061 -222633793 + AluSg SINE Alu 1 292 -18 2164 170 14 2 chr2 28054312 28054735 -222633119 + L1 LINE L1 4812 5239 -907 2013 123 3 7 chr2 28055254 28055547 -222632307 - AluSx SINE Alu -20 292 1 222 241 19 0 chr2 28056233 28056287 -222631567 + L2 LINE L2 2550 2604 -710 955 268 69 119 chr2 28056886 28057597 -222630257 + L2 LINE L2 2591 3276 -37 1730 104 25 0 chr2 28057670 28057949 -222629905 - L1MA5A LINE L1 -4 6293 6008 2225 127 0 10 chr2 28058695 28058872 -222628982 - AluSx SINE Alu -1 311 137 2226 95 0 13 chr2 28058872 28059176 -222628678 - AluSc SINE Alu -9 300 1 2225 127 0 10 chr2 28059176 28059312 -222628542 - AluSx SINE Alu -175 137 1 793 120 33 13 chr2 28059448 28059598 -222628256 + L1M2 LINE L1 5318 5470 -830 340 194 28 14 chr2 28059598 28059670 -222628184 - MER2 DNA MER2_type 0 345 273 990 86 39 0 chr2 28059672 28059800 -222628054 + AluSg SINE Alu 1 133 -177 728 113 48 0 chr2 28059812 28059936 -222627918 - MER2 DNA MER2_type -86 259 130 3846 130 4 83 chr2 28059936 28060137 -222627717 - Tigger1 DNA MER2_type 0 2418 2203 6031 32 0 0 chr2 28060137 28060847 -222627007 - L1PA3 LINE L1 -1 6154 5445 3846 130 4 83 chr2 28060847 28060878 -222626976 - Tigger1 DNA MER2_type -215 2203 2171 2194 136 0 3 chr2 28060878 28061187 -222626667 + AluSx SINE Alu 1 308 -4 3846 130 4 83 chr2 28061187 28061740 -222626114 - Tigger1 DNA MER2_type -247 2171 1694 * 6577 132 64 55 chr2 28061717 28063070 -222624784 - Tigger1 DNA MER2_type -1053 1365 1 532 191 200 0 chr2 28063070 28063179 -222624675 - MER2 DNA MER2_type -214 131 1 798 142 39 0 chr2 28063201 28063328 -222624526 + FLAM_A SINE Alu 2 133 0 1792 99 17 0 chr2 28063335 28063568 -222624286 + AluSc SINE Alu 1 237 -72 281 169 17 0 chr2 28063568 28063627 -222624227 + (TA)n Simple_repeat Simple_repeat 2 61 0 348 304 51 88 chr2 28064929 28065146 -222622708 + HAL1 LINE L1 1684 1892 -615 253 286 94 21 chr2 28065522 28065714 -222622140 + HAL1 LINE L1 2165 2370 -137 21 57 0 0 chr2 28065848 28065883 -222621971 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 28065915 28065937 -222621917 + AT_rich Low_complexity Low_complexity 1 22 0 2394 103 5 46 chr2 28066348 28066765 -222621089 + L1PA13 LINE L1 5759 6158 -5 388 91 0 0 chr2 28066766 28066821 -222621033 + MSTB2 LTR MaLR 403 457 0 2535 60 0 0 chr2 28066856 28067157 -222620697 - AluY SINE Alu -10 301 1 189 220 20 40 chr2 28067258 28067308 -222620546 - MIR SINE MIR -105 157 109 898 141 0 22 chr2 28067384 28067519 -222620335 - FLAM_C SINE Alu -1 132 1 1731 152 20 10 chr2 28067909 28068206 -222619648 - AluJb SINE Alu -12 300 1 1265 259 211 15 chr2 28068589 28069531 -222618323 + L2 LINE L2 2176 3311 -2 879 123 8 0 chr2 28070251 28070381 -222617473 + FLAM_C SINE Alu 1 131 -2 27 0 0 0 chr2 28070384 28070411 -222617443 + AT_rich Low_complexity Low_complexity 1 27 0 353 242 109 32 chr2 28070476 28070607 -222617247 + MIR SINE MIR 70 208 0 2028 183 57 28 chr2 28070654 28071124 -222616730 + MLT1D LTR MaLR 22 505 0 305 279 38 0 chr2 28071508 28071587 -222616267 + MIR3 SINE MIR 109 190 -18 2141 113 3 0 chr2 28071777 28072085 -222615769 - AluSq SINE Alu 0 309 1 672 196 243 0 chr2 28072364 28072537 -222615317 + MER58C DNA MER1_type 1 215 0 229 132 0 0 chr2 28073139 28073177 -222614677 + L1ME4a LINE L1 6080 6117 -4 285 119 0 0 chr2 28073503 28073545 -222614309 - MIR SINE MIR -66 196 155 1555 261 76 9 chr2 28076131 28076778 -222611076 + L1M4 LINE L1 3851 4540 -1606 1742 161 4 7 chr2 28076784 28077058 -222610796 + AluJb SINE Alu 1 273 -39 2243 124 54 94 chr2 28077193 28077691 -222610163 + L1MB3 LINE L1 5706 6183 0 410 250 49 24 chr2 28077683 28077847 -222610007 + L1M4 LINE L1 4699 4866 -1280 * 248 175 18 0 chr2 28077848 28077905 -222609949 + Charlie7 DNA MER1_type 2165 2222 -390 25 75 0 0 chr2 28077980 28078033 -222609821 + AT_rich Low_complexity Low_complexity 1 53 0 2014 153 33 19 chr2 28078071 28078431 -222609423 + MLT1A1 LTR MaLR 1 365 0 2225 97 10 3 chr2 28078458 28078757 -222609097 + AluSc SINE Alu 1 301 -8 203 361 135 0 chr2 28078948 28079081 -222608773 - L2 LINE L2 -167 3105 2955 207 282 11 55 chr2 28079830 28080011 -222607843 + GA-rich Low_complexity Low_complexity 4 176 0 598 229 33 33 chr2 28080289 28080442 -222607412 + MIR SINE MIR 89 241 -21 284 262 114 13 chr2 28080991 28081140 -222606714 + MER112 DNA MER1_type 78 241 -19 873 319 150 12 chr2 28081175 28081683 -222606171 + L3 LINE CR1 997 1574 -3 970 158 124 13 chr2 28082432 28082666 -222605188 + MER5C DNA MER1_type 3 262 -62 1157 168 92 27 chr2 28083646 28083908 -222603946 - LTR35 LTR ERV1 -339 279 1 241 273 7 58 chr2 28084235 28084374 -222603480 + CT-rich Low_complexity Low_complexity 4 135 0 1468 214 36 78 chr2 28084458 28084545 -222603309 + L1ME3A LINE L1 5659 5748 -422 2714 93 11 11 chr2 28084545 28084920 -222602934 - THE1C LTR MaLR 0 375 1 1468 214 36 78 chr2 28084920 28085361 -222602493 + L1ME3A LINE L1 5748 6165 -5 288 281 141 47 chr2 28085542 28085670 -222602184 - L2 LINE L2 -38 3234 3095 256 310 0 0 chr2 28085721 28085779 -222602075 + MIR SINE MIR 79 136 -72 1360 155 32 79 chr2 28086214 28086441 -222601413 + L1MB3 LINE L1 5160 5353 -827 1927 157 0 7 chr2 28086441 28086741 -222601113 + AluJo SINE Alu 15 312 0 1360 155 32 79 chr2 28086741 28086958 -222600896 + L1MB3 LINE L1 5353 5579 -601 2144 111 0 88 chr2 28086963 28087200 -222600654 + L1PA16 LINE L1 5804 5995 -171 1509 164 20 37 chr2 28087200 28087498 -222600356 + AluJb SINE Alu 1 293 -19 2144 111 0 88 chr2 28087498 28087648 -222600206 + L1PA16 LINE L1 5995 6157 -9 2994 135 49 14 chr2 28087667 28088258 -222599596 + L1MB3 LINE L1 5571 6182 -1 22 56 0 0 chr2 28088308 28088344 -222599510 + AT_rich Low_complexity Low_complexity 1 36 0 245 250 32 16 chr2 28088830 28088954 -222598900 + (CGCGG)n Simple_repeat Simple_repeat 2 127 0 184 278 206 41 chr2 28090310 28090407 -222597447 + MIR SINE MIR 30 142 -66 194 308 64 0 chr2 28090820 28090898 -222596956 + MIR SINE MIR 129 211 -51 285 250 14 14 chr2 28091734 28091806 -222596048 - L2 LINE L2 0 3313 3242 2462 82 0 0 chr2 28091897 28092200 -222595654 + AluSc SINE Alu 1 303 -6 3006 202 61 18 chr2 28093392 28094225 -222593629 - L1MC4a LINE L1 -126 7682 6814 232 258 15 30 chr2 28095580 28095646 -222592208 - L2 LINE L2 -1 3312 3248 256 330 62 0 chr2 28096605 28096702 -222591152 + MIR3 SINE MIR 82 184 -24 2211 165 46 0 chr2 28096715 28097146 -222590708 + L1MB7 LINE L1 5734 6184 0 891 150 0 0 chr2 28097166 28097299 -222590555 + FLAM_A SINE Alu 1 133 0 2050 97 31 3 chr2 28097660 28097950 -222589904 - AluSq SINE Alu -15 298 1 2628 52 0 0 chr2 28098945 28099251 -222588603 + AluY SINE Alu 1 306 -5 303 119 0 0 chr2 28099887 28099929 -222587925 + 5S rRNA rRNA 1 42 -79 420 284 59 35 chr2 28100068 28100322 -222587532 - L1ME2 LINE L1 -212 5952 5693 695 204 136 9 chr2 28100369 28100589 -222587265 - MER112 DNA MER1_type -10 250 3 529 289 132 5 chr2 28100595 28100792 -222587062 - L1ME2 LINE L1 -2159 5649 5428 670 297 118 38 chr2 28100798 28101069 -222586785 - L1ME2 LINE L1 -755 5391 5143 264 100 0 0 chr2 28101069 28101109 -222586745 + (TG)n Simple_repeat Simple_repeat 1 40 0 240 35 0 0 chr2 28101108 28101137 -222586717 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 670 297 118 38 chr2 28101109 28101524 -222586330 - L1ME2 LINE L1 -1003 5143 4680 225 321 83 9 chr2 28101640 28101749 -222586105 - L2 LINE L2 -198 3115 2999 3890 143 35 50 chr2 28101754 28102494 -222585360 - MER44D DNA MER2_type -3 602 2 755 271 123 22 chr2 28102596 28102913 -222584941 + HAL1 LINE L1 679 1027 -1480 610 233 48 0 chr2 28102927 28103073 -222584781 + HAL1 LINE L1 1587 1739 -768 258 292 15 0 chr2 28103091 28103156 -222584698 + HAL1 LINE L1 1814 1879 -628 647 304 64 5 chr2 28103495 28103715 -222584139 + MIR SINE MIR 2 234 -28 472 315 18 0 chr2 28103914 28104079 -222583775 + MARNA DNA Mariner 62 229 -357 1742 163 10 16 chr2 28104301 28104607 -222583247 + AluJb SINE Alu 1 304 -8 275 254 99 18 chr2 28105779 28105991 -222581863 - MER102b DNA MER1_type 0 341 46 5700 151 77 2 chr2 28106326 28107347 -222580507 - L1P LINE L1 -1752 4394 3297 1400 206 57 34 chr2 28107347 28107696 -222580158 - MSTD LTR MaLR -39 357 1 324 353 158 16 chr2 28107696 28107886 -222579968 - L2 LINE L2 -97 3175 2959 191 344 33 22 chr2 28108018 28108108 -222579746 - L2 LINE L2 -504 2810 2720 7191 29 1 1 chr2 28108113 28108964 -222578890 + L1PA3 LINE L1 5305 6155 0 274 360 17 67 chr2 28109775 28109953 -222577901 - MIR3 SINE MIR -6 202 34 1643 151 33 3 chr2 28110163 28110462 -222577392 - L1MB3 LINE L1 -19 6164 5857 342 212 257 0 chr2 28110470 28110583 -222577271 + L1MEc LINE L1 1116 1257 -5139 * 2146 127 65 3 chr2 28110578 28110933 -222576921 - L1MB3 LINE L1 -245 5938 5562 642 263 126 52 chr2 28111214 28111408 -222576446 - L1MB3 LINE L1 -297 5824 5646 1752 185 0 16 chr2 28111408 28111721 -222576133 - AluJb SINE Alu -4 308 1 642 263 126 52 chr2 28111721 28111979 -222575875 - L1MB3 LINE L1 -475 5646 5313 311 301 18 44 chr2 28112147 28112260 -222575594 + MER5B DNA MER1_type 63 172 -6 192 290 230 0 chr2 28112610 28112710 -222575144 + L2 LINE L2 3190 3312 -1 206 291 0 0 chr2 28113587 28113642 -222574212 + L2 LINE L2 3216 3270 -2 340 358 11 16 chr2 28114192 28114379 -222573475 - L1M4 LINE L1 -3552 2594 2409 241 222 10 30 chr2 28114476 28114575 -222573279 - L1M4 LINE L1 -3794 2352 2256 25 0 0 0 chr2 28114617 28114642 -222573212 + AT_rich Low_complexity Low_complexity 1 25 0 19845 85 23 4 chr2 28114789 28115696 -222572158 + Charlie3 DNA MER1_type 1 889 -1817 219 36 0 0 chr2 28115696 28115724 -222572130 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 19845 85 23 4 chr2 28115724 28117471 -222570383 + Charlie3 DNA MER1_type 889 2706 0 23 86 0 0 chr2 28117752 28117810 -222570044 + AT_rich Low_complexity Low_complexity 1 58 0 846 288 4 13 chr2 28117855 28118088 -222569766 + MIR SINE MIR 32 262 0 276 354 18 18 chr2 28118123 28118236 -222569618 - L2 LINE L2 -226 3046 2934 241 307 80 33 chr2 28118503 28118653 -222569201 + MIR SINE MIR 7 163 -99 21 0 0 0 chr2 28118734 28118755 -222569099 + AT_rich Low_complexity Low_complexity 1 21 0 3019 237 83 31 chr2 28119743 28119868 -222567986 + L1MEc LINE L1 800 917 -5479 2077 149 0 0 chr2 28119868 28120164 -222567690 - AluJo SINE Alu -16 296 1 3019 237 83 31 chr2 28120164 28121248 -222566606 + L1MEc LINE L1 917 2072 -4324 754 164 8 22 chr2 28121273 28121407 -222566447 + FLAM_C SINE Alu 2 133 0 2344 61 0 0 chr2 28121640 28121948 -222565906 - AluY SINE Alu 0 308 1 374 177 0 0 chr2 28122367 28122429 -222565425 - L2 LINE L2 -250 3063 3002 1875 135 15 7 chr2 28122680 28122954 -222564900 + AluJo SINE Alu 17 292 -20 222 296 62 0 chr2 28123568 28123649 -222564205 - MIR SINE MIR -108 154 69 1797 152 17 10 chr2 28124737 28125039 -222562815 + AluJb SINE Alu 1 304 -8 1725 148 30 11 chr2 28125042 28125312 -222562542 + AluSg SINE Alu 1 275 -35 211 151 19 57 chr2 28125695 28125719 -222562135 + (CAGAGA)n Simple_repeat Simple_repeat 2 25 -27 2196 120 0 0 chr2 28125719 28126019 -222561835 + AluSx SINE Alu 1 300 -12 211 151 19 57 chr2 28126019 28126047 -222561807 + (CAGAGA)n Simple_repeat Simple_repeat 25 52 0 302 292 100 46 chr2 28126058 28126188 -222561666 - L2 LINE L2 0 3272 3136 2111 91 28 3 chr2 28126697 28126983 -222560871 + AluSg SINE Alu 1 293 -17 22 0 0 0 chr2 28127220 28127242 -222560612 + AT_rich Low_complexity Low_complexity 1 22 0 1592 171 7 31 chr2 28127764 28128082 -222559772 - AluJb SINE Alu 0 311 1 1362 158 108 23 chr2 28128206 28128505 -222559349 - AluJb SINE Alu 0 321 1 26 0 0 0 chr2 28129415 28129441 -222558413 + AT_rich Low_complexity Low_complexity 1 26 0 2520 205 46 34 chr2 28129634 28130311 -222557543 - L1ME1 LINE L1 -4 6231 5547 1748 134 0 103 chr2 28130414 28130743 -222557111 - AluJb SINE Alu -17 295 1 3684 230 67 82 chr2 28130770 28132521 -222555333 - L1ME1 LINE L1 -1291 4924 3199 788 210 64 72 chr2 28132532 28132922 -222554932 - L1ME1 LINE L1 -3961 2254 1900 1636 217 59 33 chr2 28132925 28133903 -222553951 - L1M4 LINE L1 -789 5357 4106 2319 107 0 0 chr2 28133903 28134202 -222553652 + AluSx SINE Alu 1 299 -13 1636 217 59 33 chr2 28134202 28134363 -222553491 - L1M4 LINE L1 -2040 4106 3951 2286 84 10 3 chr2 28134665 28134964 -222552890 + AluSx SINE Alu 1 301 -11 4497 211 86 80 chr2 28135766 28137118 -222550736 - L1M4 LINE L1 -2196 3950 2583 935 103 0 14 chr2 28137118 28137264 -222550590 - L1PB1 LINE L1 -1 6150 6007 4497 211 86 80 chr2 28137264 28137738 -222550116 - L1M4 LINE L1 -3563 2583 2113 1526 168 103 0 chr2 28138444 28138587 -222549267 - AluJo SINE Alu -23 289 162 1688 164 0 13 chr2 28138587 28138885 -222548969 - AluJo SINE Alu -9 303 10 1526 168 103 0 chr2 28138885 28139003 -222548851 - AluJo SINE Alu -150 162 1 22 56 0 0 chr2 28140147 28140183 -222547671 + AT_rich Low_complexity Low_complexity 1 36 0 210 225 0 0 chr2 28141937 28141977 -222545877 + L2 LINE L2 3231 3270 -2 254 412 91 3 chr2 28142019 28142349 -222545505 + L3 LINE CR1 96 454 -1123 1585 243 101 87 chr2 28143067 28143652 -222544202 + MLT1H1 LTR MaLR 1 553 -2 496 181 16 0 chr2 28143868 28143995 -222543859 + (TA)n Simple_repeat Simple_repeat 2 130 0 25 0 0 0 chr2 28143999 28144024 -222543830 + AT_rich Low_complexity Low_complexity 1 25 0 353 312 85 30 chr2 28146025 28146224 -222541630 - MIR SINE MIR -40 222 13 2383 114 16 19 chr2 28146664 28147031 -222540823 + MER47A DNA MER2_type 1 366 0 1995 160 0 7 chr2 28147134 28147441 -222540413 - AluJo SINE Alu -7 305 1 1436 202 30 14 chr2 28147513 28147810 -222540044 - AluJo SINE Alu -8 304 3 2298 115 0 0 chr2 28148599 28148911 -222538943 + AluSx SINE Alu 1 312 0 966 324 180 57 chr2 28148983 28149388 -222538466 + L3 LINE CR1 320 673 -904 1387 181 169 49 chr2 28149388 28149796 -222538058 + MSTB2 LTR MaLR 1 457 0 966 324 180 57 chr2 28149796 28150432 -222537422 + L3 LINE CR1 673 1490 -87 287 225 45 34 chr2 28150520 28150609 -222537245 - MER94 DNA DNA -43 91 2 1017 218 36 27 chr2 28150740 28151071 -222536783 - L1MC5 LINE L1 -34 7927 7594 222 196 43 0 chr2 28151071 28151117 -222536737 + (CATA)n Simple_repeat Simple_repeat 1 48 0 194 229 14 0 chr2 28151217 28151287 -222536567 + CT-rich Low_complexity Low_complexity 3 73 0 1592 195 67 69 chr2 28151330 28152030 -222535824 - L1MC5 LINE L1 -466 7495 6766 249 261 29 0 chr2 28152510 28152579 -222535275 - LTR16C LTR ERVL 0 491 421 1998 125 50 39 chr2 28152580 28152940 -222534914 + THE1B LTR MaLR 1 364 0 10279 84 104 1 chr2 28152940 28154372 -222533482 + THE1B-int LTR MaLR 1 1580 0 2254 112 48 28 chr2 28154372 28154729 -222533125 + THE1B LTR MaLR 1 364 0 588 338 110 0 chr2 28154729 28155037 -222532817 - LTR16C LTR ERVL -67 424 83 952 218 0 33 chr2 28155104 28155315 -222532539 + MER20 DNA MER1_type 16 219 0 1294 260 45 69 chr2 28155916 28156608 -222531246 - L1MC4 LINE L1 -148 7894 7220 660 309 92 20 chr2 28157574 28157869 -222529985 + L3 LINE CR1 1161 1476 -101 1076 161 33 5 chr2 28157930 28158141 -222529713 + MER33 DNA MER1_type 1 217 -107 27 0 0 0 chr2 28158154 28158181 -222529673 + AT_rich Low_complexity Low_complexity 1 27 0 2153 103 10 3 chr2 28158183 28158475 -222529379 - AluSx SINE Alu -16 296 3 245 202 105 81 chr2 28159036 28159160 -222528694 + L1ME1 LINE L1 316 442 -5628 5633 231 50 51 chr2 28159325 28162121 -222525733 + L1ME1 LINE L1 3293 6080 -20 437 158 33 17 chr2 28162121 28162241 -222525613 + MER33 DNA MER1_type 203 324 0 1319 314 64 37 chr2 28162701 28163406 -222524448 + L3 LINE CR1 674 1397 -180 2431 150 36 7 chr2 28163451 28163865 -222523989 + MSTB LTR MaLR 1 426 0 5071 113 7 16 chr2 28164041 28164430 -222523424 - L1PA15 LINE L1 0 6165 5785 2213 121 0 19 chr2 28164430 28164744 -222523110 - AluSx SINE Alu -4 308 1 5071 113 7 16 chr2 28164744 28165127 -222522727 - L1PA15 LINE L1 -380 5785 5400 21 36 0 0 chr2 28166144 28166172 -222521682 + AT_rich Low_complexity Low_complexity 1 28 0 1256 151 37 0 chr2 28166205 28166450 -222521404 + L1MA4 LINE L1 6038 6291 -9 4587 160 37 18 chr2 28166754 28168007 -222519847 - L1MB7 LINE L1 -10 6174 4899 429 97 28 0 chr2 28168022 28168094 -222519760 - L1MB2 LINE L1 -4 6167 6094 2236 184 45 12 chr2 28168109 28168256 -222519598 - L1MB2 LINE L1 -228 5943 5802 351 0 0 0 chr2 28168256 28168295 -222519559 + (CA)n Simple_repeat Simple_repeat 2 40 0 2236 184 45 12 chr2 28168295 28168631 -222519223 - L1MB2 LINE L1 -369 5802 5444 * 2945 239 26 11 chr2 28168627 28169440 -222518414 - L1MB7 LINE L1 -1237 4909 4085 33 25 0 0 chr2 28170036 28170076 -222517778 + AT_rich Low_complexity Low_complexity 1 40 0 5588 78 14 1 chr2 28170111 28170469 -222517385 - L1PB1 LINE L1 -1 6150 5798 369 0 0 0 chr2 28170469 28170510 -222517344 + (TG)n Simple_repeat Simple_repeat 2 42 0 5588 78 14 1 chr2 28170510 28170919 -222516935 - L1PB1 LINE L1 -353 5798 5373 581 257 67 26 chr2 28172468 28172692 -222515162 - MIR SINE MIR -16 246 20 1926 170 0 0 chr2 28172945 28173245 -222514609 + AluJb SINE Alu 1 300 -12 22 0 0 0 chr2 28174517 28174539 -222513315 + AT_rich Low_complexity Low_complexity 1 22 0 186 376 92 9 chr2 28174740 28174849 -222513005 - L2 LINE L2 -218 3054 2937 237 288 38 12 chr2 28175279 28175359 -222512495 - MIR3 SINE MIR -14 194 113 31 26 0 0 chr2 28176117 28176155 -222511699 + AT_rich Low_complexity Low_complexity 1 38 0 25 51 0 0 chr2 28176216 28176255 -222511599 + AT_rich Low_complexity Low_complexity 1 39 0 267 324 0 14 chr2 28176514 28176585 -222511269 - MER5A DNA MER1_type 0 189 120 214 313 144 62 chr2 28176516 28176676 -222511178 + MER5A DNA MER1_type 17 189 0 * 4100 156 68 43 chr2 28176783 28177675 -222510179 - L1MB7 LINE L1 0 6184 5270 1110 283 67 59 chr2 28178128 28178499 -222509355 + L2 LINE L2 2816 3193 -120 500 236 18 0 chr2 28178499 28178609 -222509245 + MER81 DNA DNA 2 113 -1 1110 283 67 59 chr2 28178609 28178731 -222509123 + L2 LINE L2 3193 3313 0 1910 218 65 17 chr2 28179734 28180258 -222507596 - L1ME3A LINE L1 -11 6159 5611 539 248 242 28 chr2 28180298 28180922 -222506932 - LTR41 LTR ERVL -2 793 1 407 333 69 43 chr2 28180940 28180985 -222506869 - L1ME LINE L1 -5110 960 918 2363 85 0 3 chr2 28180985 28181292 -222506562 - AluY SINE Alu -5 306 1 407 333 69 43 chr2 28181292 28181637 -222506217 - L1ME LINE L1 -5152 918 560 21 0 0 0 chr2 28182390 28182411 -222505443 + AT_rich Low_complexity Low_complexity 1 21 0 32 81 0 0 chr2 28182490 28182564 -222505290 + AT_rich Low_complexity Low_complexity 1 74 0 2152 116 0 0 chr2 28183285 28183577 -222504277 + AluSg SINE Alu 1 292 -18 31 26 0 0 chr2 28183703 28183741 -222504113 + AT_rich Low_complexity Low_complexity 1 38 0 191 389 40 32 chr2 28184457 28184583 -222503271 + L2 LINE L2 3108 3234 -38 264 343 76 19 chr2 28184697 28184907 -222502947 - L2 LINE L2 -226 3046 2825 6284 147 50 38 chr2 28185382 28186644 -222501210 - L1MC3 LINE L1 -8 7777 6501 268 295 13 0 chr2 28186720 28186798 -222501056 - L2 LINE L2 -1 3312 3234 203 327 46 26 chr2 28186812 28186938 -222500916 - L2 LINE L2 0 3313 3093 2364 159 68 5 chr2 28186958 28187353 -222500501 - MSTB LTR MaLR -6 420 1 488 253 18 35 chr2 28187418 28187588 -222500266 - MLT1K LTR MaLR 0 588 422 661 269 81 15 chr2 28187968 28188302 -222499552 + L1MEc LINE L1 1346 1701 -4695 342 276 0 48 chr2 28188697 28188802 -222499052 - MER5B DNA MER1_type -37 141 42 1293 164 14 0 chr2 28188809 28189022 -222498832 + AluJb SINE Alu 87 302 -10 713 169 97 19 chr2 28190102 28190256 -222497598 - AluJb SINE Alu -11 301 136 21 36 0 0 chr2 28190542 28190570 -222497284 + AT_rich Low_complexity Low_complexity 1 28 0 688 221 59 37 chr2 28191172 28191443 -222496411 - L1MC5 LINE L1 -82 7879 7603 708 189 60 37 chr2 28191449 28191666 -222496188 - L1MC5 LINE L1 -407 7554 7333 24 32 0 0 chr2 28192384 28192415 -222495439 + AT_rich Low_complexity Low_complexity 1 31 0 206 333 17 0 chr2 28192651 28192768 -222495086 + (TA)n Simple_repeat Simple_repeat 1 119 0 188 398 55 16 chr2 28193417 28193545 -222494309 - L2 LINE L2 -2 3270 3138 225 183 0 141 chr2 28193786 28193857 -222493997 - Charlie8 DNA MER1_type 0 2417 2357 262 305 29 29 chr2 28194615 28194720 -222493134 + MER5A DNA MER1_type 65 169 -9 28 0 0 0 chr2 28194818 28194846 -222493008 + AT_rich Low_complexity Low_complexity 1 28 0 689 279 71 75 chr2 28196045 28196607 -222491247 - MLT1K LTR MaLR -27 561 2 207 0 0 0 chr2 28199078 28199101 -222488753 + (A)n Simple_repeat Simple_repeat 1 23 0 324 0 0 0 chr2 28199107 28199143 -222488711 + (CA)n Simple_repeat Simple_repeat 2 37 0 195 129 0 0 chr2 28200002 28200033 -222487821 + (T)n Simple_repeat Simple_repeat 1 31 0 285 281 10 10 chr2 28201189 28201285 -222486569 + CT-rich Low_complexity Low_complexity 2 97 0 281 284 0 0 chr2 28202365 28202432 -222485422 + L3 LINE CR1 1247 1313 -264 2135 169 52 12 chr2 28202917 28203397 -222484457 - L1MB8 LINE L1 -1 6177 5679 5312 134 20 38 chr2 28203410 28204259 -222483595 - L1PB1 LINE L1 0 6151 5331 3706 79 0 0 chr2 28204259 28204740 -222483114 - L1PA8 LINE L1 -13 6159 5679 5312 134 20 38 chr2 28204740 28205381 -222482473 - L1PB1 LINE L1 -820 5331 4680 366 294 99 64 chr2 28205813 28206126 -222481728 - L1ME4a LINE L1 -23 6098 5775 264 271 54 60 chr2 28206187 28206353 -222481501 - L1ME4a LINE L1 -362 5759 5595 351 0 0 0 chr2 28206366 28206405 -222481449 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr2 28208611 28208632 -222479222 + AT_rich Low_complexity Low_complexity 1 21 0 2261 202 37 26 chr2 28209261 28209536 -222478318 + Charlie1a DNA MER1_type 5 275 -2486 2582 27 0 7 chr2 28209536 28209833 -222478021 + AluY SINE Alu 1 295 -16 2261 202 37 26 chr2 28209833 28210101 -222477753 + Charlie1a DNA MER1_type 275 554 -901 21 0 0 0 chr2 28210276 28210297 -222477557 + AT_rich Low_complexity Low_complexity 1 21 0 347 301 82 7 chr2 28211020 28211166 -222476688 - MER5A DNA MER1_type -31 158 2 21 57 0 0 chr2 28212177 28212212 -222475642 + AT_rich Low_complexity Low_complexity 1 35 0 358 255 121 13 chr2 28212313 28212462 -222475392 + MIR SINE MIR 77 241 -21 1689 183 26 10 chr2 28212953 28213259 -222474595 + AluJb SINE Alu 1 311 -1 207 193 23 45 chr2 28214090 28214178 -222473676 + (TTATA)n Simple_repeat Simple_repeat 2 87 0 22 35 0 0 chr2 28214368 28214397 -222473457 + AT_rich Low_complexity Low_complexity 1 29 0 2151 51 0 0 chr2 28214595 28214849 -222473005 - AluY SINE Alu -14 297 44 2490 226 149 12 chr2 28214865 28215605 -222472249 + L2 LINE L2 1706 2546 -768 496 153 0 0 chr2 28216214 28216286 -222471568 - FLAM_A SINE Alu -54 88 17 2119 86 0 7 chr2 28216425 28216694 -222471160 - AluY SINE Alu -44 267 1 21 36 0 0 chr2 28216796 28216824 -222471030 + AT_rich Low_complexity Low_complexity 1 28 0 196 252 130 16 chr2 28216891 28217014 -222470840 - L2 LINE L2 -144 3169 3033 2198 102 0 3 chr2 28217690 28217985 -222469869 - AluSq SINE Alu -17 296 3 337 301 7 98 chr2 28218361 28218514 -222469340 + MIR3 SINE MIR 2 140 -68 2518 76 0 0 chr2 28218728 28219031 -222468823 - AluY SINE Alu -8 303 1 205 260 60 0 chr2 28219090 28219140 -222468714 + MIR3 SINE MIR 149 201 -7 666 144 30 66 chr2 28219400 28219567 -222468287 - L1MB3 LINE L1 0 6183 6023 222 274 83 12 chr2 28220201 28220285 -222467569 + MIR SINE MIR 60 149 -113 313 348 22 38 chr2 28220766 28220950 -222466904 + L2 LINE L2 2217 2397 -917 1604 164 7 41 chr2 28221101 28221418 -222466436 - AluJb SINE Alu 0 307 1 22 106 0 0 chr2 28221434 28221519 -222466335 + AT_rich Low_complexity Low_complexity 1 85 0 279 79 0 0 chr2 28221809 28221847 -222466007 + (CA)n Simple_repeat Simple_repeat 1 38 0 204 40 0 0 chr2 28221846 28221871 -222465983 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 1213 184 5 22 chr2 28222947 28223170 -222464684 + MER20 DNA MER1_type 1 219 0 420 208 0 0 chr2 28223341 28223442 -222464412 + (TA)n Simple_repeat Simple_repeat 2 102 0 1018 92 10 146 chr2 28224012 28224218 -222463636 + AluSp SINE Alu 136 313 0 1702 116 0 21 chr2 28224225 28224466 -222463388 + AluSc SINE Alu 71 306 -3 270 261 14 0 chr2 28224466 28224535 -222463319 - L1MEd LINE L1 -6037 82 13 469 288 96 0 chr2 28224708 28224854 -222463000 + L2 LINE L2 2580 2739 -575 453 247 43 19 chr2 28225246 28225406 -222462448 + L1MC3 LINE L1 5983 6146 -20 987 206 70 58 chr2 28225585 28225929 -222461925 - L1MC5 LINE L1 -865 7096 6749 881 204 0 0 chr2 28225946 28226093 -222461761 - FRAM SINE Alu -17 159 13 1616 103 0 0 chr2 28226097 28226301 -222461553 - AluSc SINE Alu -15 294 91 2551 54 0 0 chr2 28226309 28226605 -222461249 - AluY SINE Alu -15 296 1 330 280 34 17 chr2 28226607 28226725 -222461129 - L1MC4a LINE L1 -1075 6733 6614 367 233 93 13 chr2 28226743 28226893 -222460961 - L1MC5 LINE L1 -46 7915 7754 1770 181 0 10 chr2 28227134 28227422 -222460432 + AluJo SINE Alu 2 286 -26 547 198 0 9 chr2 28227849 28227965 -222459889 + L1M4 LINE L1 4834 4948 -1198 2550 77 0 0 chr2 28227975 28228286 -222459568 + AluY SINE Alu 1 311 0 201 167 0 0 chr2 28228313 28228349 -222459505 + (TA)n Simple_repeat Simple_repeat 2 37 0 422 177 21 0 chr2 28228353 28228449 -222459405 + L1M4 LINE L1 4976 5073 -1073 327 248 120 0 chr2 28228453 28228578 -222459276 + Charlie1 DNA MER1_type 2622 2761 0 2247 115 3 0 chr2 28228648 28228952 -222458902 + AluSx SINE Alu 1 305 -7 2230 101 7 3 chr2 28228955 28229261 -222458593 + AluSc SINE Alu 1 307 -2 334 266 176 75 chr2 28229627 28229938 -222457916 + MLT1K LTR MaLR 11 370 -218 1311 205 28 6 chr2 28229938 28230255 -222457599 - MER33 DNA MER1_type 0 324 1 334 266 176 75 chr2 28230255 28230330 -222457524 + MLT1K LTR MaLR 370 436 -152 1726 134 19 0 chr2 28230512 28230819 -222457035 - L1MB8 LINE L1 -189 5989 5677 1089 247 141 37 chr2 28230950 28231411 -222456443 - MLT1E LTR MaLR 0 593 85 490 255 21 21 chr2 28231518 28231659 -222456195 + L2 LINE L2 3158 3298 -15 195 42 0 0 chr2 28231660 28231684 -222456170 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 2380 113 0 0 chr2 28231788 28232098 -222455756 - AluSx SINE Alu -2 310 1 3476 146 43 0 chr2 28232251 28232861 -222454993 - L1MB2 LINE L1 -14 6157 5522 216 306 0 0 chr2 28233059 28233108 -222454746 - L3 LINE CR1 -1328 249 201 317 299 15 0 chr2 28233978 28234112 -222453742 - L1MEc LINE L1 -4950 1446 1311 734 96 0 10 chr2 28236642 28236746 -222451108 - AluSp SINE Alu -210 103 1 2128 67 15 0 chr2 28236910 28237218 -222450636 - AluY SINE Alu 0 325 14 387 0 0 0 chr2 28237353 28237396 -222450458 + (TG)n Simple_repeat Simple_repeat 2 44 0 202 374 0 22 chr2 28237499 28237590 -222450264 + L2 LINE L2 3225 3313 0 2317 108 3 0 chr2 28238245 28238587 -222449267 - L1PA7 LINE L1 -1844 4302 3960 7020 71 35 1 chr2 28238589 28240352 -222447502 + L1PA7 LINE L1 4313 6135 -19 554 102 0 11 chr2 28240352 28240440 -222447414 + (GGAA)n Simple_repeat Simple_repeat 2 88 0 403 37 0 0 chr2 28240540 28240594 -222447260 + AluSp/q SINE Alu 247 300 -13 4453 86 5 7 chr2 28242616 28243662 -222444192 - L1PA8A LINE L1 -411 5720 4676 609 263 198 9 chr2 28244904 28245121 -222442733 + MIR SINE MIR 5 262 0 1113 236 59 34 chr2 28245956 28246397 -222441457 - L1M4 LINE L1 -1626 4520 4069 381 251 0 118 chr2 28246397 28246584 -222441270 - L1M4 LINE L1 -2346 3800 3636 261 314 36 71 chr2 28246991 28247131 -222440723 - MIR3 SINE MIR -17 191 57 310 297 65 33 chr2 28247604 28247754 -222440100 - MIR SINE MIR -62 146 40 2154 99 3 0 chr2 28248011 28248295 -222439559 + AluSc SINE Alu 2 286 -23 29 28 0 0 chr2 28248567 28248603 -222439251 + AT_rich Low_complexity Low_complexity 1 36 0 318 235 83 36 chr2 28248841 28248971 -222438883 + MIR SINE MIR 31 164 -65 272 301 65 0 chr2 28249533 28249626 -222438228 - L2 LINE L2 -16 3297 3199 804 175 78 6 chr2 28249798 28249964 -222437890 - MER5B DNA MER1_type 0 178 1 2205 102 7 3 chr2 28250602 28250895 -222436959 + AluSx SINE Alu 1 294 -18 557 260 122 29 chr2 28250986 28251310 -222436544 - L1MCb LINE L1 -5791 254 46 328 277 0 84 chr2 28252013 28252132 -222435722 - MIR SINE MIR -134 128 20 2410 80 0 3 chr2 28252849 28253149 -222434705 + AluSx SINE Alu 3 301 -11 265 267 130 23 chr2 28253661 28253792 -222434062 + L1ME3A LINE L1 6018 6162 -8 2166 105 0 66 chr2 28253986 28254320 -222433534 + AluSx SINE Alu 1 312 0 25 0 0 0 chr2 28254505 28254530 -222433324 + AT_rich Low_complexity Low_complexity 1 25 0 2090 211 143 2 chr2 28254572 28255060 -222432794 - MLT1F1 LTR MaLR 0 567 11 2055 96 57 0 chr2 28255079 28255359 -222432495 - AluSq SINE Alu -17 296 1 203 184 0 0 chr2 28255391 28255429 -222432425 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 181 279 35 35 chr2 28255649 28255735 -222432119 - L2 LINE L2 -310 2962 2877 193 317 79 30 chr2 28255945 28256046 -222431808 + L2 LINE L2 3193 3298 -15 26 50 0 0 chr2 28256056 28256096 -222431758 + AT_rich Low_complexity Low_complexity 1 40 0 340 153 0 34 chr2 28257434 28257493 -222430361 - L2 LINE L2 -1 3312 3256 412 234 71 35 chr2 28257830 28257971 -222429883 + MIR SINE MIR 116 261 -1 890 184 0 7 chr2 28258010 28258162 -222429692 - FRAM SINE Alu -20 156 6 1162 23 0 0 chr2 28258674 28258806 -222429048 - AluYa5/8 SINE Alu -9 302 171 316 275 61 46 chr2 28259035 28259166 -222428688 + MIR SINE MIR 17 149 -113 764 198 84 55 chr2 28259359 28259632 -222428222 - L1MC5 LINE L1 -435 7526 7246 477 245 84 21 chr2 28259839 28259982 -222427872 + L2 LINE L2 3162 3313 0 261 0 0 0 chr2 28261077 28261106 -222426748 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1574 189 18 0 chr2 28261108 28261383 -222426471 - AluJo SINE Alu -31 281 2 7549 29 5 0 chr2 28261809 28262968 -222424886 + L1PA5 LINE L1 4983 6145 -9 262 386 44 0 chr2 28263253 28263411 -222424443 + MIR SINE MIR 13 177 -85 780 176 28 60 chr2 28263820 28264036 -222423818 - L1MC4 LINE L1 -152 7890 7682 529 116 23 12 chr2 28264070 28264156 -222423698 - FLAM SINE Alu -16 127 41 1541 213 80 4 chr2 28264173 28264662 -222423192 - L1MC4 LINE L1 -363 7679 6990 694 177 19 32 chr2 28264669 28264827 -222423027 - L1MC4 LINE L1 -1410 6632 6477 254 372 105 21 chr2 28264997 28265330 -222422524 + L2 LINE L2 2600 2960 -354 30 0 0 0 chr2 28267153 28267183 -222420671 + AT_rich Low_complexity Low_complexity 1 30 0 210 238 0 0 chr2 28267310 28267352 -222420502 + L2 LINE L2 3264 3305 -8 273 241 17 0 chr2 28267547 28267605 -222420249 - MIR3 SINE MIR -3 205 147 1389 235 108 38 chr2 28267645 28268173 -222419681 - L1MC4a LINE L1 -1680 6128 5564 253 164 233 27 chr2 28268177 28268250 -222419604 - MIR SINE MIR -116 146 59 600 285 19 94 chr2 28268256 28268512 -222419342 + L2 LINE L2 3035 3271 -1 425 311 122 39 chr2 28268618 28268904 -222418950 + L3 LINE CR1 856 1165 -412 356 348 43 7 chr2 28268939 28269080 -222418774 - MIR SINE MIR -109 153 8 224 221 0 15 chr2 28269710 28269778 -222418076 + CT-rich Low_complexity Low_complexity 3 69 0 337 271 124 23 chr2 28269797 28269974 -222417880 - L1ME LINE L1 -407 5714 5520 277 275 81 34 chr2 28271125 28271445 -222416409 - L1ME LINE L1 -1555 4591 4257 305 333 146 19 chr2 28272427 28272748 -222415106 - L1ME LINE L1 -2201 3945 3584 2197 92 0 38 chr2 28273181 28273496 -222414358 + AluSx SINE Alu 1 303 -9 23 0 0 0 chr2 28275271 28275294 -222412560 + AT_rich Low_complexity Low_complexity 1 23 0 2255 102 0 16 chr2 28275438 28275752 -222412102 + AluSx SINE Alu 1 309 -3 25 31 0 0 chr2 28275943 28275975 -222411879 + AT_rich Low_complexity Low_complexity 1 32 0 1185 186 219 0 chr2 28276053 28276295 -222411559 - AluJb SINE Alu -7 295 1 485 286 44 118 chr2 28279223 28279586 -222408268 - MER102b DNA MER1_type -5 336 1 1131 112 10 36 chr2 28280919 28281115 -222406739 - AluSq SINE Alu -18 295 105 990 153 31 0 chr2 28281869 28282032 -222405822 - MER58B DNA MER1_type 0 341 174 836 78 0 0 chr2 28282034 28282150 -222405704 + L1MA5A LINE L1 6178 6293 -4 262 229 0 0 chr2 28282226 28282274 -222405580 - MER58B DNA MER1_type -292 49 2 253 264 7 101 chr2 28282518 28282581 -222405273 + MIR SINE MIR 97 140 -122 1641 176 35 67 chr2 28282581 28282955 -222404899 + MLT1A1 LTR MaLR 4 365 0 253 264 7 101 chr2 28282955 28283039 -222404815 + MIR SINE MIR 140 230 -32 2996 131 4 0 chr2 28283117 28283575 -222404279 + L1PA15 LINE L1 5706 6165 0 2988 194 25 56 chr2 28283789 28284557 -222403297 + L1MA9 LINE L1 5544 6287 -25 22 0 0 0 chr2 28284601 28284623 -222403231 + AT_rich Low_complexity Low_complexity 1 22 0 549 319 16 11 chr2 28285186 28285368 -222402486 - L3 LINE CR1 -364 1213 1031 226 313 192 37 chr2 28285906 28286002 -222401852 - L2 LINE L2 -189 3083 3003 2322 78 7 3 chr2 28286002 28286297 -222401557 + AluY SINE Alu 1 296 -15 226 313 192 37 chr2 28286297 28286414 -222401440 - L2 LINE L2 -269 3003 2837 204 40 0 0 chr2 28286693 28286718 -222401136 + (TA)n Simple_repeat Simple_repeat 2 26 0 916 193 99 12 chr2 28286847 28287090 -222400764 + MER5C DNA MER1_type 60 323 -1 22 0 0 0 chr2 28287242 28287264 -222400590 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 28287334 28287358 -222400496 + AT_rich Low_complexity Low_complexity 1 24 0 794 221 149 0 chr2 28287734 28287942 -222399912 + Charlie1 DNA MER1_type 1 239 -2522 4635 229 38 10 chr2 28288000 28289253 -222398601 + L1M4 LINE L1 3488 4774 -1372 275 341 77 0 chr2 28289373 28289464 -222398390 + L3 LINE CR1 63 160 -1417 796 309 146 12 chr2 28289507 28289992 -222397862 + L3 LINE CR1 264 813 -764 786 229 240 4 chr2 28291301 28291559 -222396295 - L1MD2 LINE L1 -11 6348 6030 2160 141 141 21 chr2 28291798 28292174 -222395680 - MSTC LTR MaLR 0 428 8 230 366 8 8 chr2 28293114 28293245 -222394609 - L2 LINE L2 -1407 1907 1777 1251 146 87 78 chr2 28293438 28293759 -222394095 + MER33 DNA MER1_type 1 324 0 264 272 0 48 chr2 28295201 28295229 -222392625 + LTR67 LTR ERVL 456 553 -4 314 213 27 27 chr2 28295229 28295304 -222392550 + MLT1K LTR MaLR 510 584 -4 357 253 154 6 chr2 28295327 28295489 -222392365 + L2 LINE L2 3116 3301 -12 197 33 33 0 chr2 28295490 28295520 -222392334 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1453 274 94 26 chr2 28295572 28296232 -222391622 - L1MC4a LINE L1 -1643 6165 5461 488 301 51 0 chr2 28296233 28296389 -222391465 + L1ME LINE L1 308 471 -5901 * 620 278 69 18 chr2 28296378 28296655 -222391199 + L1ME LINE L1 1198 1488 -4896 3801 163 1 1 chr2 28296864 28297521 -222390333 - L1PA16 LINE L1 -1 6165 5509 479 272 81 0 chr2 28297548 28297684 -222390170 + L2 LINE L2 3167 3313 0 327 277 40 61 chr2 28297688 28297836 -222390018 + MIR SINE MIR 47 191 -71 2809 10 0 0 chr2 28298783 28299091 -222388763 - AluYa5 SINE Alu -3 308 1 366 311 98 6 chr2 28300087 28300251 -222387603 + L2 LINE L2 2862 3040 -273 478 270 73 0 chr2 28300278 28300415 -222387439 - L2 LINE L2 -564 2750 2604 1964 86 11 39 chr2 28300518 28300797 -222387057 - AluY SINE Alu -40 271 1 239 259 0 0 chr2 28301876 28301930 -222385924 - L2 LINE L2 -838 2476 2423 2116 161 17 128 chr2 28301943 28302535 -222385319 + Tigger7 DNA MER2_type 1 526 -1961 510 204 0 11 chr2 28302529 28302622 -222385232 + Tigger7 DNA MER2_type 2496 2587 0 * 459 262 63 46 chr2 28302630 28302867 -222384987 - L2 LINE L2 -882 2432 2192 242 125 21 0 chr2 28302871 28302919 -222384935 + CT-rich Low_complexity Low_complexity 2 50 0 370 294 79 8 chr2 28304157 28304283 -222383571 + MIR3 SINE MIR 67 201 -7 683 223 94 40 chr2 28306394 28306618 -222381236 + MIR SINE MIR 12 247 -15 223 361 58 24 chr2 28307418 28307623 -222380231 + L2 LINE L2 1194 1405 -1909 268 218 73 0 chr2 28310484 28310539 -222377315 - L2 LINE L2 0 3272 3214 292 260 89 123 chr2 28310870 28311110 -222376744 + L1MC/D LINE L1 5297 5544 -2264 2402 69 3 0 chr2 28311110 28311437 -222376417 - AluSx SINE Alu 0 328 1 292 260 89 123 chr2 28311437 28311732 -222376122 + L1MC/D LINE L1 5544 5816 -1992 25 0 0 28 chr2 28311969 28311990 -222375864 + AT_rich Low_complexity Low_complexity 1 22 -13 7752 16 13 0 chr2 28311990 28313055 -222374799 - L1PA3 LINE L1 -3 6152 5083 25 0 0 28 chr2 28313055 28313069 -222374785 + AT_rich Low_complexity Low_complexity 22 35 0 416 332 152 23 chr2 28313070 28313419 -222374435 - L2 LINE L2 -1230 2084 1691 2418 56 0 20 chr2 28313653 28313956 -222373898 - AluY SINE Alu -14 297 1 208 246 87 43 chr2 28316234 28316303 -222371551 + L2 LINE L2 3186 3257 -15 1577 144 16 19 chr2 28316305 28316562 -222371292 - AluJo SINE Alu -20 292 37 2126 119 0 3 chr2 28316566 28316885 -222370969 - AluSx SINE Alu 0 312 1 2753 7 0 0 chr2 28316897 28317225 -222370629 - AluYa5 SINE Alu 0 328 1 643 258 100 29 chr2 28317285 28317525 -222370329 + MIR SINE MIR 2 258 -4 2542 64 0 0 chr2 28317971 28318282 -222369572 - AluY SINE Alu 0 311 1 284 383 48 13 chr2 28318346 28318576 -222369278 + L2 LINE L2 2852 3089 -183 25 51 0 0 chr2 28318588 28318627 -222369227 + AT_rich Low_complexity Low_complexity 1 39 0 586 259 144 10 chr2 28370110 28370311 -222317543 + MIR SINE MIR 35 262 0 308 271 50 50 chr2 28371614 28371754 -222316100 + MIR SINE MIR 53 192 -70 244 269 45 13 chr2 28372011 28372169 -222315685 - MIR SINE MIR -18 244 13 325 148 25 37 chr2 28372600 28372681 -222315173 + G-rich Low_complexity Low_complexity 1 80 0 225 323 131 10 chr2 28372695 28372764 -222315090 + MIR SINE MIR 21 107 -155 243 0 0 0 chr2 28372764 28372791 -222315063 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 225 323 131 10 chr2 28372791 28372820 -222315034 + MIR SINE MIR 107 131 -131 183 156 0 0 chr2 28372948 28372980 -222314874 + T-rich Low_complexity Low_complexity 4 35 0 1493 187 52 0 chr2 28373019 28373169 -222314685 - AluJo SINE Alu -31 281 109 245 51 26 0 chr2 28373169 28373208 -222314646 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1493 187 52 0 chr2 28373208 28373324 -222314530 - AluJo SINE Alu -203 109 1 868 146 79 18 chr2 28373558 28373723 -222314131 + MER53 DNA DNA 1 175 -14 215 215 15 62 chr2 28375127 28375192 -222312662 + MIR SINE MIR 85 146 -116 1220 132 0 0 chr2 28375398 28375565 -222312289 - AluSg/x SINE Alu -12 300 134 2419 75 0 16 chr2 28375565 28375871 -222311983 - AluSg SINE Alu -9 301 1 29 60 0 0 chr2 28376495 28376545 -222311309 + AT_rich Low_complexity Low_complexity 1 50 0 812 140 0 0 chr2 28377190 28377304 -222310550 - AluSq/x SINE Alu -199 114 1 1473 183 57 47 chr2 28377304 28377635 -222310219 - L1M4 LINE L1 -1436 4710 4373 2161 150 0 0 chr2 28377635 28377942 -222309912 - AluSx SINE Alu -3 309 3 1473 183 57 47 chr2 28377942 28378014 -222309840 - L1M4 LINE L1 -1773 4373 4303 2323 65 0 39 chr2 28378031 28378340 -222309514 - AluY SINE Alu -14 297 1 903 148 0 0 chr2 28379246 28379381 -222308473 + AluSq/x SINE Alu 1 135 -177 1926 91 84 15 chr2 28379391 28379665 -222308189 + AluSx SINE Alu 10 302 -10 493 322 173 24 chr2 28380062 28380432 -222307422 + L2 LINE L2 2848 3272 0 2467 65 0 0 chr2 28380889 28381179 -222306675 + AluY SINE Alu 1 290 -21 286 299 8 63 chr2 28381243 28381370 -222306484 + MIR SINE MIR 25 144 -64 472 213 0 32 chr2 28381404 28381498 -222306356 + AluJ/FLAM SINE Alu 2 92 -220 2492 87 3 0 chr2 28381680 28381992 -222305862 - AluSp SINE Alu 0 313 1 211 341 99 11 chr2 28382371 28382462 -222305392 - L2 LINE L2 -20 3252 3154 373 263 12 0 chr2 28382471 28382551 -222305303 + MER58 DNA MER1_type 1 81 -134 195 114 0 0 chr2 28382551 28382586 -222305268 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1794 136 0 4 chr2 28382589 28382847 -222305007 - AluSx SINE Alu -30 282 26 1692 212 18 68 chr2 28382948 28383005 -222304849 - L1ME LINE L1 -407 5759 5701 1688 180 44 3 chr2 28383005 28383299 -222304555 + AluJo SINE Alu 1 306 -6 2262 114 0 0 chr2 28383299 28383606 -222304248 + AluSx SINE Alu 1 308 -4 1692 212 18 68 chr2 28383606 28384005 -222303849 - L1ME LINE L1 -463 5703 5325 1224 160 9 43 chr2 28384007 28384183 -222303671 - AluJb SINE Alu -2 310 129 2299 95 0 3 chr2 28384183 28384478 -222303376 - AluSc SINE Alu -15 294 1 2322 108 7 0 chr2 28384480 28384787 -222303067 - AluSc SINE Alu 0 309 1 1224 160 9 43 chr2 28384787 28384838 -222303016 - AluJb SINE Alu -184 128 88 1534 237 97 0 chr2 28384849 28385304 -222302550 - L1ME LINE L1 -825 5321 4823 1603 115 13 4 chr2 28385306 28385532 -222302322 - AluSg/x SINE Alu -15 297 70 817 230 94 62 chr2 28385733 28385842 -222302012 + L1MD2 LINE L1 6027 6131 -228 198 103 0 0 chr2 28385842 28385871 -222301983 + (CA)n Simple_repeat Simple_repeat 2 30 0 817 230 94 62 chr2 28385871 28386070 -222301784 + L1MD2 LINE L1 6131 6345 -14 1999 125 3 32 chr2 28386787 28387098 -222300756 - AluJb SINE Alu -10 302 1 195 184 26 0 chr2 28387897 28387935 -222299919 - L2 LINE L2 -2 3311 3273 645 282 126 38 chr2 28388007 28388445 -222299409 + L2 LINE L2 2769 3247 -66 514 282 46 40 chr2 28388699 28388873 -222298981 - MIR SINE MIR -74 188 14 3514 193 116 30 chr2 28389221 28390178 -222297676 - L1MC4 LINE L1 0 8042 7004 1312 258 115 0 chr2 28390241 28390606 -222297248 - MLT1E2 LTR MaLR 0 626 220 605 223 133 70 chr2 28390742 28390929 -222296925 - L1MC5 LINE L1 -44 7917 7743 1860 151 6 31 chr2 28390929 28391248 -222296606 - AluJo SINE Alu -1 311 1 605 223 133 70 chr2 28391248 28391405 -222296449 - L1MC5 LINE L1 -218 7743 7551 2167 124 0 3 chr2 28391495 28391786 -222296068 - AluSx SINE Alu -22 290 1 1923 176 0 0 chr2 28391865 28392177 -222295677 - AluJb SINE Alu 0 312 1 1447 194 46 135 chr2 28392182 28392707 -222295147 - Charlie4a DNA MER1_type 0 508 31 206 277 31 15 chr2 28392797 28392862 -222294992 - MIR SINE MIR -103 105 40 2446 92 0 0 chr2 28392901 28393205 -222294649 - AluSx SINE Alu -8 304 1 462 226 43 0 chr2 28393404 28393519 -222294335 - L1ME1 LINE L1 -3 6163 6044 227 174 22 22 chr2 28394315 28394361 -222293493 - MIR3 SINE MIR -9 199 154 603 329 11 15 chr2 28395736 28395998 -222291856 - MIR SINE MIR 0 262 3 286 320 213 0 chr2 28396182 28396304 -222291550 - L2 LINE L2 0 3272 3125 1854 173 6 6 chr2 28396747 28397059 -222290795 - AluJo SINE Alu 0 312 1 2383 140 6 11 chr2 28397393 28397743 -222290111 - MER7A DNA MER2_type 0 346 1 435 325 30 20 chr2 28399045 28399245 -222288609 + MIR SINE MIR 20 221 -41 512 296 49 0 chr2 28400551 28400693 -222287161 + MER91A DNA MER1_type 21 169 -27 229 290 72 0 chr2 28400699 28400768 -222287086 + MER91A DNA MER1_type 123 196 0 249 217 33 109 chr2 28401478 28401524 -222286330 - MIR3 SINE MIR -7 201 164 1062 225 14 9 chr2 28401524 28401746 -222286108 - MER58A DNA MER1_type 0 224 2 249 217 33 109 chr2 28401746 28401791 -222286063 - MIR3 SINE MIR -44 164 117 333 0 0 0 chr2 28403295 28403332 -222284522 + (TG)n Simple_repeat Simple_repeat 2 38 0 326 232 21 0 chr2 28403834 28403929 -222283925 + CT-rich Low_complexity Low_complexity 4 100 0 289 250 116 9 chr2 28404222 28404334 -222283520 + MIR3 SINE MIR 53 176 -32 218 254 63 16 chr2 28404880 28404943 -222282911 - L2 LINE L2 0 3272 3207 27 0 0 0 chr2 28405156 28405183 -222282671 + AT_rich Low_complexity Low_complexity 1 27 0 222 339 42 92 chr2 28405495 28405755 -222282099 - L2 LINE L2 -22 3250 3004 2402 87 0 3 chr2 28406652 28406952 -222280902 - AluSq SINE Alu -12 301 3 351 264 66 26 chr2 28407006 28407233 -222280621 - L1MC5 LINE L1 -182 7779 7544 532 289 171 5 chr2 28407618 28407829 -222280025 + MIR SINE MIR 1 246 -16 1965 142 14 10 chr2 28407830 28408126 -222279728 - AluSx SINE Alu -15 297 1 2053 123 23 7 chr2 28409039 28409339 -222278515 - AluSq SINE Alu -8 305 1 2298 109 0 0 chr2 28410349 28410660 -222277194 + AluY SINE Alu 1 311 0 450 247 107 65 chr2 28410667 28410930 -222276924 + L1MEc LINE L1 1850 2123 -4273 350 260 88 103 chr2 28410942 28411281 -222276573 + L2 LINE L2 2851 3184 -129 1468 161 58 8 chr2 28411316 28411576 -222276278 + AluJb SINE Alu 1 273 -39 268 217 167 0 chr2 28411730 28411790 -222276064 - MER58 DNA MER1_type -1 2419 2350 262 352 82 38 chr2 28411962 28412121 -222275733 - L2 LINE L2 0 3272 3107 541 349 100 40 chr2 28412195 28412825 -222275029 - L2 LINE L2 -342 2972 2305 250 125 0 0 chr2 28413182 28413222 -222274632 + L1MB4 LINE L1 5892 5931 -249 189 107 0 0 chr2 28413240 28413268 -222274586 + (A)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 28413294 28413316 -222274538 + AT_rich Low_complexity Low_complexity 1 22 0 755 233 87 23 chr2 28413340 28413559 -222274295 - MIR SINE MIR -13 249 17 264 375 80 0 chr2 28414340 28414428 -222273426 - L2 LINE L2 -25 3247 3153 2185 90 35 0 chr2 28415263 28415551 -222272303 + AluSx SINE Alu 1 298 -14 228 240 0 20 chr2 28415727 28415777 -222272077 + (CA)n Simple_repeat Simple_repeat 1 49 0 1103 153 0 0 chr2 28416092 28416255 -222271599 - AluSg/x SINE Alu -11 301 139 2125 119 0 3 chr2 28416549 28416843 -222271011 + AluSq SINE Alu 1 293 -20 2285 112 0 3 chr2 28417942 28418247 -222269607 - AluSg SINE Alu -6 304 1 831 169 0 8 chr2 28418480 28418610 -222269244 - FLAM_C SINE Alu -4 129 1 288 176 15 59 chr2 28419418 28419486 -222268368 + MLT1L LTR MaLR 2 66 -549 742 241 256 9 chr2 28419544 28419868 -222267986 + MLT1L LTR MaLR 200 603 -12 1482 89 0 5 chr2 28420730 28420921 -222266933 - AluSq SINE Alu -9 304 115 236 262 9 84 chr2 28421292 28421399 -222266455 - MIR SINE MIR -46 216 118 1176 140 21 72 chr2 28421555 28421614 -222266240 - L1MD1 LINE L1 -10 6232 6172 2277 128 0 0 chr2 28421614 28421927 -222265927 + AluSq SINE Alu 1 313 0 1176 140 21 72 chr2 28421927 28422103 -222265751 - L1MD1 LINE L1 -70 6172 6009 357 24 0 0 chr2 28422165 28422207 -222265647 + (CA)n Simple_repeat Simple_repeat 2 43 0 521 184 132 7 chr2 28422465 28422601 -222265253 - MLT1J2 LTR MaLR -278 172 20 557 243 98 55 chr2 28422601 28422856 -222264998 + L1ME3A LINE L1 5685 5950 -220 583 187 89 16 chr2 28422931 28423054 -222264800 + FLAM_A SINE Alu 2 133 0 26 30 0 0 chr2 28424769 28424802 -222263052 + AT_rich Low_complexity Low_complexity 1 33 0 180 0 0 0 chr2 28424923 28424943 -222262911 + (A)n Simple_repeat Simple_repeat 1 20 0 1512 214 89 3 chr2 28426037 28426350 -222261504 + MER58B DNA MER1_type 1 340 -1 730 290 82 51 chr2 28426480 28426870 -222260984 - L2 LINE L2 -13 3300 2899 357 264 95 10 chr2 28426946 28427188 -222260666 - L2 LINE L2 -815 2499 2185 444 217 40 86 chr2 28427833 28427985 -222259869 + MER5A DNA MER1_type 7 151 -38 587 287 66 11 chr2 28429303 28429518 -222258336 + MIR SINE MIR 38 262 0 194 291 81 12 chr2 28429552 28429638 -222258216 - L3b LINE CR1 -223 1360 1269 2266 113 0 16 chr2 28429645 28429956 -222257898 - AluSx SINE Alu -6 306 1 1878 137 29 29 chr2 28430505 28430811 -222257043 + AluJb SINE Alu 3 308 -4 757 241 65 5 chr2 28431068 28431304 -222256550 + MIR SINE MIR 2 249 -13 1364 239 7 7 chr2 28431863 28432173 -222255681 - AluJo SINE Alu 0 312 3 606 279 93 8 chr2 28433015 28433252 -222254602 - MIR SINE MIR 0 262 6 229 257 184 33 chr2 28433287 28433439 -222254415 - MIR SINE MIR -13 249 75 955 85 16 23 chr2 28433890 28434019 -222253835 - FLAM_C SINE Alu -4 129 2 2389 94 0 0 chr2 28434108 28434406 -222253448 - AluSg SINE Alu -12 298 1 2035 108 7 0 chr2 28436473 28436752 -222251102 - AluSx SINE Alu -4 308 28 192 77 0 0 chr2 28437211 28437237 -222250617 + (CA)n Simple_repeat Simple_repeat 2 27 0 243 153 119 0 chr2 28437432 28437491 -222250363 - L1ME3 LINE L1 -210 5952 5887 26 30 0 0 chr2 28437509 28437542 -222250312 + AT_rich Low_complexity Low_complexity 1 33 0 2073 126 10 7 chr2 28437661 28437970 -222249884 + AluSx SINE Alu 1 310 -2 200 56 83 0 chr2 28437986 28438022 -222249832 + GA-rich Low_complexity Low_complexity 2 40 0 1135 279 97 29 chr2 28438072 28438729 -222249125 - L1ME3 LINE L1 -259 5903 5380 203 311 81 27 chr2 28438730 28438804 -222249050 - L2 LINE L2 -43 3229 3152 232 143 0 0 chr2 28439249 28439284 -222248570 - MLT1D LTR MaLR -470 35 1 555 329 88 8 chr2 28439851 28440091 -222247763 + MIR SINE MIR 4 262 0 240 149 0 0 chr2 28440206 28440253 -222247601 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 1719 167 32 0 chr2 28440331 28440613 -222247241 + AluJo SINE Alu 3 293 -19 270 136 0 0 chr2 28440771 28440815 -222247039 + (TC)n Simple_repeat Simple_repeat 1 44 0 502 264 0 23 chr2 28441972 28442101 -222245753 - MLT1D LTR MaLR -349 156 31 198 0 0 0 chr2 28444534 28444556 -222243298 + (A)n Simple_repeat Simple_repeat 1 22 0 2876 176 36 52 chr2 28445281 28445919 -222241935 - L1ME1 LINE L1 -137 6029 5402 3769 196 32 39 chr2 28445921 28446235 -222241619 - L1ME1 LINE L1 -801 5345 5030 1823 150 59 83 chr2 28446235 28446392 -222241462 + MLT1A1 LTR MaLR 1 160 -205 2168 122 3 0 chr2 28446392 28446680 -222241174 - AluSp SINE Alu -24 289 1 1823 150 59 83 chr2 28446680 28446896 -222240958 + MLT1A1 LTR MaLR 160 365 0 3769 196 32 39 chr2 28446896 28447561 -222240293 - L1ME1 LINE L1 -1116 5030 4373 223 158 0 0 chr2 28447577 28447615 -222240239 - L2 LINE L2 -9 3304 3267 2243 103 3 0 chr2 28447872 28448164 -222239690 - AluSx SINE Alu -17 295 3 2270 99 0 7 chr2 28449119 28449411 -222238443 + AluSx SINE Alu 3 292 -20 318 50 0 0 chr2 28449700 28449740 -222238114 + (CA)n Simple_repeat Simple_repeat 1 40 0 636 138 0 0 chr2 28450173 28450289 -222237565 + (TC)n Simple_repeat Simple_repeat 1 116 0 4221 53 12 0 chr2 28450295 28450787 -222237067 - L1PA5 LINE L1 -5 6149 5652 252 229 145 53 chr2 28452199 28452330 -222235524 - L1MC5 LINE L1 -58 7903 7761 755 118 100 0 chr2 28452446 28452556 -222235298 + FLAM_C SINE Alu 2 122 -21 260 164 15 0 chr2 28452561 28452628 -222235226 + GA-rich Low_complexity Low_complexity 2 69 0 2498 68 0 0 chr2 28452769 28453065 -222234789 - AluY SINE Alu -15 296 1 241 254 99 0 chr2 28453256 28453327 -222234527 + L2 LINE L2 3159 3236 -36 519 148 0 11 chr2 28453623 28453711 -222234143 - AluSg/x SINE Alu -7 302 216 620 278 64 6 chr2 28454481 28454654 -222233200 + MER5A DNA MER1_type 1 183 -6 275 356 24 87 chr2 28457039 28457328 -222230526 + L2 LINE L2 2981 3251 -21 209 152 0 0 chr2 28458055 28458088 -222229766 - L2 LINE L2 -9 3304 3272 2145 97 3 17 chr2 28458476 28458765 -222229089 - AluSc SINE Alu -24 285 1 253 344 11 11 chr2 28458775 28458865 -222228989 + MIR SINE MIR 18 107 -155 350 110 22 44 chr2 28459028 28459119 -222228735 + L1ME LINE L1 5346 5434 -687 580 288 23 104 chr2 28459902 28460336 -222227518 - L2 LINE L2 0 3272 2874 2085 110 13 23 chr2 28460356 28460656 -222227198 + AluSx SINE Alu 1 297 -15 180 0 0 0 chr2 28460736 28460756 -222227098 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1409 191 11 14 chr2 28460758 28461041 -222226813 - AluJo SINE Alu -30 282 1 2104 99 0 11 chr2 28461964 28462267 -222225587 - AluSc SINE Alu 0 300 1 1657 171 11 21 chr2 28462435 28462752 -222225102 - AluJb SINE Alu 0 314 1 2335 108 0 6 chr2 28463144 28463458 -222224396 - AluSx SINE Alu 0 312 1 2319 97 10 0 chr2 28464643 28464942 -222222912 - AluSx SINE Alu -10 302 1 739 269 68 94 chr2 28466373 28466890 -222220964 + L1MC4 LINE L1 7004 7533 -509 1585 174 0 55 chr2 28466890 28467201 -222220653 - AluJo SINE Alu -3 309 16 739 269 68 94 chr2 28467201 28467380 -222220474 + L1MC4 LINE L1 7533 7715 -327 2402 98 0 0 chr2 28467380 28467687 -222220167 + AluSq SINE Alu 1 307 -6 739 269 68 94 chr2 28467687 28468065 -222219789 + L1MC4 LINE L1 7715 8040 -2 2261 103 7 0 chr2 28468295 28468585 -222219269 - AluSg SINE Alu -18 292 1 541 298 22 28 chr2 28469341 28469519 -222218335 - MIR SINE MIR -66 196 20 1372 143 0 52 chr2 28469911 28470141 -222217713 + MER20 DNA MER1_type 1 218 -1 248 368 60 8 chr2 28472120 28472253 -222215601 + MIR3 SINE MIR 13 152 -56 1324 103 0 5 chr2 28473084 28473269 -222214585 - AluSp SINE Alu 0 313 130 348 318 226 0 chr2 28473837 28474054 -222213800 + L3 LINE CR1 1307 1572 -5 436 260 83 30 chr2 28474945 28475114 -222212740 - MIR3 SINE MIR -1 207 30 261 268 268 9 chr2 28475713 28475825 -222212029 - MIR3 SINE MIR -31 177 37 425 289 53 83 chr2 28475867 28475955 -222211899 + MIR SINE MIR 20 109 -153 1933 116 0 96 chr2 28475955 28476290 -222211564 + AluJb SINE Alu 1 303 -9 425 289 53 83 chr2 28476290 28476429 -222211425 + MIR SINE MIR 109 240 -22 451 173 370 25 chr2 28476448 28476610 -222211244 + MER112 DNA MER1_type 4 221 -39 303 287 57 33 chr2 28478448 28478570 -222209284 - L2 LINE L2 -7 3265 3141 2296 108 0 0 chr2 28479631 28479936 -222207918 - AluSx SINE Alu -7 305 1 304 314 103 27 chr2 28480102 28480287 -222207567 + MIR SINE MIR 9 207 -55 1110 212 5 0 chr2 28481494 28481697 -222206157 + MER58A DNA MER1_type 1 204 -20 541 363 0 0 chr2 28482514 28482649 -222205205 - L2 LINE L2 -1 3271 3137 261 0 0 0 chr2 28482876 28482905 -222204949 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2081 125 0 0 chr2 28482907 28483187 -222204667 - AluSx SINE Alu -32 280 1 180 189 176 27 chr2 28484644 28484718 -222203136 - MIR SINE MIR -68 194 110 445 292 159 10 chr2 28485174 28485369 -222202485 + MIR SINE MIR 12 235 -27 22 35 0 0 chr2 28485891 28485920 -222201934 + AT_rich Low_complexity Low_complexity 1 29 0 505 283 7 7 chr2 28487871 28488016 -222199838 - L2 LINE L2 -1 3312 3168 2206 116 0 25 chr2 28488365 28488685 -222199169 - AluSx SINE Alu 0 312 1 2173 142 64 6 chr2 28488723 28489082 -222198772 + MLT1B LTR MaLR 11 390 0 533 256 109 42 chr2 28489341 28489742 -222198112 + LTR33 LTR ERVL 49 513 -8 282 377 43 0 chr2 28489742 28489880 -222197974 - L2 LINE L2 -974 2340 2197 2241 85 0 0 chr2 28490262 28490589 -222197265 + AluSx SINE Alu 2 328 0 591 243 33 13 chr2 28490711 28490863 -222196991 - MIR SINE MIR -48 214 60 21 36 0 0 chr2 28492098 28492126 -222195728 + AT_rich Low_complexity Low_complexity 1 28 0 288 271 0 0 chr2 28492164 28492234 -222195620 + L1ME LINE L1 5563 5632 -489 1678 164 27 24 chr2 28492344 28492642 -222195212 + AluJo SINE Alu 1 299 -13 30 27 0 0 chr2 28492942 28492979 -222194875 + AT_rich Low_complexity Low_complexity 1 37 0 315 237 0 54 chr2 28493920 28494013 -222193841 - L1MC4a LINE L1 -1892 5916 5829 206 330 91 0 chr2 28494229 28494317 -222193537 + L3 LINE CR1 1407 1502 -75 180 0 0 0 chr2 28494913 28494933 -222192921 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 302 0 26 0 chr2 28494937 28494975 -222192879 + (TG)n Simple_repeat Simple_repeat 2 40 0 1867 233 5 16 chr2 28495671 28496049 -222191805 - MLT1A2 LTR MaLR 0 374 1 352 245 0 21 chr2 28497100 28497194 -222190660 - L2 LINE L2 -63 3250 3159 15678 164 23 51 chr2 28497219 28499137 -222188717 + L1MA4A LINE L1 7 1978 -5027 2290 126 0 0 chr2 28499137 28499446 -222188408 + AluSx SINE Alu 1 309 -3 15678 164 23 51 chr2 28499446 28504603 -222183251 + L1MA4A LINE L1 1978 6934 -71 2197 85 0 24 chr2 28504704 28504997 -222182857 - AluY SINE Alu -25 286 1 266 260 68 0 chr2 28505980 28506053 -222181801 + L2 LINE L2 3230 3307 -6 22 0 0 0 chr2 28506453 28506475 -222181379 + AT_rich Low_complexity Low_complexity 1 22 0 2055 119 0 7 chr2 28507290 28507602 -222180252 - AluSx SINE Alu 0 310 1 23 33 0 0 chr2 28507925 28507955 -222179899 + AT_rich Low_complexity Low_complexity 1 30 0 218 325 17 43 chr2 28508841 28508958 -222178896 + C-rich Low_complexity Low_complexity 6 119 0 472 268 142 21 chr2 28510380 28510683 -222177171 - L1ME LINE L1 -504 5617 5255 462 218 10 0 chr2 28511218 28511319 -222176535 - MIR SINE MIR -5 257 156 282 255 50 71 chr2 28511340 28511481 -222176373 + MLT1J2 LTR MaLR 23 160 -290 240 234 0 0 chr2 28511690 28511737 -222176117 + MLT1I LTR MaLR 361 407 -2 2272 108 0 10 chr2 28511751 28512056 -222175798 + AluSc SINE Alu 1 302 -7 375 121 136 0 chr2 28512061 28512127 -222175727 - MIR SINE MIR -101 161 87 436 295 16 16 chr2 28512615 28512744 -222175110 - L2 LINE L2 0 3313 3185 269 210 0 160 chr2 28513077 28513196 -222174658 + MER91A DNA MER1_type 55 154 -42 530 258 18 12 chr2 28513458 28513648 -222174206 - MIR SINE MIR 0 262 7 1618 127 57 96 chr2 28513753 28513915 -222173939 + AluJo SINE Alu 1 147 -165 189 107 0 0 chr2 28513915 28513943 -222173911 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1618 127 57 96 chr2 28513943 28514094 -222173760 + AluJo SINE Alu 147 302 -10 196 167 28 0 chr2 28514126 28514162 -222173692 + L2 LINE L2 3262 3298 -15 1571 160 4 0 chr2 28514492 28514736 -222173118 - AluJo SINE Alu -67 245 1 316 240 34 23 chr2 28515095 28515203 -222172651 - MIR SINE MIR -92 116 11 2151 123 7 0 chr2 28517752 28518053 -222169801 + AluSx SINE Alu 1 303 -9 285 235 12 37 chr2 28518167 28518248 -222169606 + MIR SINE MIR 111 189 -73 1212 176 5 23 chr2 28518745 28518961 -222168893 - AluJb SINE Alu -14 298 87 218 246 16 16 chr2 28518986 28519047 -222168807 + L2 LINE L2 3203 3263 -9 314 277 36 27 chr2 28519087 28519199 -222168655 - MIR SINE MIR -51 211 99 207 100 0 0 chr2 28520323 28520353 -222167501 + (A)n Simple_repeat Simple_repeat 1 30 0 2143 104 3 0 chr2 28521431 28521720 -222166134 - AluSx SINE Alu -22 290 1 273 172 40 101 chr2 28521813 28521912 -222165942 - HAL1 LINE L1 -2 2505 2413 244 350 150 0 chr2 28522083 28522203 -222165651 - L2 LINE L2 -8 3264 3127 414 375 112 13 chr2 28522269 28522932 -222164922 - L2 LINE L2 -251 3021 2291 2375 72 7 13 chr2 28523976 28524282 -222163572 - AluSp SINE Alu -8 305 2 1853 159 10 10 chr2 28524378 28524674 -222163180 - AluJo SINE Alu -16 296 1 273 339 115 15 chr2 28525997 28526127 -222161727 + MIR3 SINE MIR 8 150 -58 197 256 23 0 chr2 28526955 28526998 -222160856 + MIR SINE MIR 213 256 -6 2293 96 3 3 chr2 28527033 28527334 -222160520 + AluSg SINE Alu 1 301 -9 204 97 0 0 chr2 28527856 28527887 -222159967 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2695 157 55 21 chr2 28529582 28530111 -222157743 + L1MA9 LINE L1 5729 6275 -37 475 238 105 7 chr2 28530215 28530358 -222157496 - MIR SINE MIR -19 243 87 516 285 150 10 chr2 28530472 28530679 -222157175 + MIR SINE MIR 10 245 -17 448 256 17 8 chr2 28531272 28531389 -222156465 - MIR SINE MIR -126 136 19 490 264 60 22 chr2 28531442 28531624 -222156230 + MER5A DNA MER1_type 1 189 0 998 199 46 51 chr2 28532004 28532044 -222155810 - L1P LINE L1 -764 5391 5352 3200 155 11 9 chr2 28532044 28532573 -222155281 - L1MB8 LINE L1 0 6178 5649 998 199 46 51 chr2 28532573 28532796 -222155058 - L1P LINE L1 -803 5352 5132 238 270 95 7 chr2 28532967 28533104 -222154750 + L1M LINE L1 5255 5403 -956 2558 51 0 0 chr2 28533961 28534256 -222153598 - AluY SINE Alu -16 295 1 395 325 52 7 chr2 28534316 28534470 -222153384 - MER20B DNA MER1_type -616 167 7 189 354 43 26 chr2 28535983 28536135 -222151719 - MIR SINE MIR -100 108 4 488 298 42 50 chr2 28536550 28536788 -222151066 - MIR SINE MIR -6 256 21 346 291 47 68 chr2 28537170 28537318 -222150536 + MIR3 SINE MIR 20 164 -44 1948 123 11 18 chr2 28537774 28538087 -222149767 + AluSq SINE Alu 1 311 0 327 323 37 63 chr2 28538840 28538943 -222148911 - MIR SINE MIR -4 258 161 14862 110 36 1 chr2 28538943 28541785 -222146069 + L1PA10 LINE L1 3284 6168 0 327 323 37 63 chr2 28541785 28541870 -222145984 - MIR SINE MIR -101 161 75 217 321 179 14 chr2 28541896 28542036 -222145818 - MIR3 SINE MIR -43 165 3 620 282 97 9 chr2 28542573 28542789 -222145065 - MIR SINE MIR -1 261 27 2443 82 0 19 chr2 28544620 28544938 -222142916 - AluSx SINE Alu 0 312 1 240 313 96 9 chr2 28545833 28545948 -222141906 + MIR SINE MIR 84 208 -54 4943 199 153 102 chr2 28546239 28546509 -222141345 - L1ME2 LINE L1 0 6233 5978 2095 121 3 0 chr2 28546509 28546806 -222141048 + AluSx SINE Alu 1 298 -14 4943 199 153 102 chr2 28546806 28547394 -222140460 - L1ME2 LINE L1 -255 5978 5422 773 163 0 64 chr2 28547394 28547535 -222140319 - FLAM_C SINE Alu -1 132 1 4943 199 153 102 chr2 28547535 28548252 -222139602 - L1ME2 LINE L1 -811 5422 4743 1097 172 0 0 chr2 28548252 28548421 -222139433 - AluSg/x SINE Alu -10 302 134 2124 133 0 0 chr2 28548421 28548721 -222139133 - AluSq SINE Alu -5 308 9 4943 199 153 102 chr2 28548721 28548948 -222138906 - L1ME2 LINE L1 -1490 4743 4529 1948 127 3 21 chr2 28548948 28549239 -222138615 - AluSx SINE Alu -10 302 17 766 153 0 0 chr2 28549239 28549350 -222138504 - AluJb SINE Alu -200 112 2 4943 199 153 102 chr2 28549350 28551057 -222136797 - L1ME2 LINE L1 -1704 4529 2911 2371 96 0 10 chr2 28551057 28551369 -222136485 - AluSg SINE Alu -1 309 1 2462 103 0 0 chr2 28551369 28551680 -222136174 - AluSx SINE Alu -1 311 1 4943 199 153 102 chr2 28551680 28552141 -222135713 - L1ME2 LINE L1 -3321 2912 1810 310 262 35 19 chr2 28552398 28552523 -222135331 - MIR SINE MIR -62 146 43 611 250 67 12 chr2 28553138 28553302 -222134552 + MIR SINE MIR 20 192 -70 1408 233 51 28 chr2 28553303 28553698 -222134156 - MLT1E3 LTR MaLR 0 624 221 433 186 280 8 chr2 28553745 28553863 -222133991 - MLT1E3 LTR MaLR -503 151 2 2302 108 0 0 chr2 28554975 28555280 -222132574 + AluSx SINE Alu 1 305 -7 2573 63 0 0 chr2 28555353 28555656 -222132198 + AluY SINE Alu 1 303 -8 391 320 16 0 chr2 28555930 28556052 -222131802 + MIR SINE MIR 16 139 -69 1892 133 59 14 chr2 28606062 28606348 -222081506 - AluJb SINE Alu -13 299 1 2359 99 0 16 chr2 28607352 28607700 -222080154 + AluSq SINE Alu 1 313 0 180 321 54 54 chr2 28607778 28607890 -222079964 + L2 LINE L2 3192 3303 -10 356 363 18 23 chr2 28608582 28608753 -222079101 - L1 LINE L1 -2316 3830 3661 242 313 133 5 chr2 28608870 28609065 -222078789 - L2 LINE L2 -2411 903 684 2322 117 3 0 chr2 28609194 28609521 -222078333 - AluSx SINE Alu 0 328 1 245 169 113 28 chr2 28609790 28609861 -222077993 + MIR SINE MIR 184 260 -2 286 276 112 17 chr2 28610226 28610342 -222077512 + MIR SINE MIR 24 150 -58 581 283 130 24 chr2 28610840 28611178 -222076676 + LTR16A LTR ERVL 1 362 -88 833 126 0 44 chr2 28611396 28611531 -222076323 - FLAM_C SINE Alu -14 129 1 434 248 48 67 chr2 28611570 28611780 -222076074 - MLT1K LTR MaLR -6 582 377 239 50 0 25 chr2 28612177 28612217 -222075637 - L1MB5 LINE L1 -9 6165 6127 742 141 0 8 chr2 28612231 28612352 -222075502 + AluJb SINE Alu 14 133 -179 1370 174 16 4 chr2 28612358 28612611 -222075243 - L1MB5 LINE L1 -33 6141 5886 1865 153 3 17 chr2 28612755 28613049 -222074805 - AluJb SINE Alu -4 308 19 381 295 71 86 chr2 28613699 28613909 -222073945 - MIR SINE MIR -37 225 19 214 339 26 0 chr2 28613922 28614037 -222073817 - L2 LINE L2 -233 3039 2922 4158 227 41 18 chr2 28614781 28615870 -222071984 - L1MC4 LINE L1 -141 7901 6788 6865 51 0 1 chr2 28615886 28616756 -222071098 - L1PA5 LINE L1 -8 6146 5278 320 176 40 14 chr2 28616750 28616824 -222071030 - L1MC4a LINE L1 -1085 6723 6648 * 479 188 0 0 chr2 28617064 28617149 -222070705 - AluJo SINE Alu -111 201 117 277 280 97 17 chr2 28617766 28617941 -222069913 - MIR SINE MIR -54 208 20 379 283 42 17 chr2 28618050 28618170 -222069684 + MIR SINE MIR 23 145 -63 2569 176 81 31 chr2 28619262 28620048 -222067806 - L1ME2 LINE L1 -168 5996 5170 315 167 32 32 chr2 28620050 28620112 -222067742 + Alu SINE Alu 1 48 -255 255 284 181 13 chr2 28621116 28621271 -222066583 - MIR SINE MIR -39 223 43 622 160 10 0 chr2 28621383 28621483 -222066371 - AluSp/q SINE Alu -18 295 195 292 219 94 10 chr2 28622034 28622130 -222065724 + L2 LINE L2 3168 3271 -1 295 218 42 99 chr2 28622267 28622409 -222065445 - L2 LINE L2 -452 2862 2729 248 293 83 68 chr2 28622664 28622869 -222064985 - L2 LINE L2 -362 2952 2745 682 185 0 13 chr2 28623794 28623951 -222063903 + CT-rich Low_complexity Low_complexity 2 156 0 248 196 18 0 chr2 28624112 28624168 -222063686 + (TAAA)n Simple_repeat Simple_repeat 1 57 0 281 202 112 34 chr2 28625355 28625444 -222062410 + L2 LINE L2 3217 3312 -1 1471 187 79 0 chr2 28625476 28625743 -222062111 + AluJo SINE Alu 1 288 -24 21 0 0 0 chr2 28625745 28625766 -222062088 + AT_rich Low_complexity Low_complexity 1 21 0 343 215 93 19 chr2 28626814 28626921 -222060933 + MIR SINE MIR 69 183 -79 22 0 0 0 chr2 28628626 28628648 -222059206 + AT_rich Low_complexity Low_complexity 1 22 0 2495 103 0 0 chr2 28628741 28629052 -222058802 + AluSx SINE Alu 1 311 -1 997 154 43 0 chr2 28629128 28629316 -222058538 - L1MB2 LINE L1 -1 6170 5975 225 65 0 0 chr2 28629335 28629366 -222058488 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1217 116 0 45 chr2 28629476 28629674 -222058180 + AluSc SINE Alu 115 303 -6 372 119 45 15 chr2 28629772 28629839 -222058015 - LTR42 LTR ERVL -65 430 362 * 1556 146 4 8 chr2 28629832 28630086 -222057768 - LTR42 LTR ERVL -242 253 1 2248 133 33 25 chr2 28630128 28630489 -222057365 - THE1B LTR MaLR 0 364 1 1806 170 12 3 chr2 28630646 28630976 -222056878 - L1MB3 LINE L1 -8 6175 5843 1719 169 6 48 chr2 28630976 28631134 -222056720 + AluJb SINE Alu 2 142 -170 1490 146 120 81 chr2 28631134 28631566 -222056288 - LTR7 LTR ERV1 0 450 2 1719 169 6 48 chr2 28631566 28631720 -222056134 + AluJb SINE Alu 142 301 -11 3401 193 13 7 chr2 28631720 28632906 -222054948 - L1MB3 LINE L1 -326 5857 4667 634 144 10 0 chr2 28632929 28633026 -222054828 + AluSg/x SINE Alu 78 175 -135 1813 286 85 11 chr2 28633126 28633776 -222054078 + L2 LINE L2 1665 2362 -952 3210 249 56 47 chr2 28633781 28634343 -222053511 + L1ME LINE L1 6 561 -5519 1420 166 68 64 chr2 28634343 28634639 -222053215 + AluJo SINE Alu 1 297 -15 3210 249 56 47 chr2 28634639 28635688 -222052166 + L1ME LINE L1 561 1640 -4440 493 223 108 135 chr2 28635693 28635989 -222051865 + L2 LINE L2 2353 2640 -674 207 0 0 0 chr2 28635991 28636014 -222051840 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 486 151 269 0 chr2 28636014 28636107 -222051747 - FLAM_C SINE Alu -24 119 2 921 281 76 14 chr2 28636108 28636576 -222051278 + L2 LINE L2 2632 3143 -170 636 141 29 129 chr2 28636616 28636786 -222051068 - FAM SINE Alu -13 172 20 2095 115 7 3 chr2 28636792 28637078 -222050776 - AluSx SINE Alu -25 287 1 238 169 145 24 chr2 28637109 28637192 -222050662 + LTR56 LTR ERV1 1 93 -352 803 142 83 100 chr2 28637608 28637848 -222050006 + LTR56 LTR ERV1 85 320 -125 556 214 0 15 chr2 28637974 28638105 -222049749 + L1MC4 LINE L1 7912 8040 -2 231 339 31 16 chr2 28638258 28638385 -222049469 + L2 LINE L2 1317 1445 -1869 219 238 0 0 chr2 28639451 28639493 -222048361 + MIR SINE MIR 109 150 -112 369 301 90 15 chr2 28639623 28639756 -222048098 - MIR SINE MIR -47 215 73 345 197 28 0 chr2 28640295 28640366 -222047488 - MIR SINE MIR -101 161 89 276 236 182 18 chr2 28640685 28640795 -222047059 + MIR3 SINE MIR 65 192 -16 210 324 29 9 chr2 28640927 28641032 -222046822 + MIR SINE MIR 35 141 -67 1077 174 5 20 chr2 28641464 28641660 -222046194 + AluSp SINE Alu 117 309 -4 732 233 36 26 chr2 28641927 28642120 -222045734 - MER89-int LTR ERV1 -6148 653 459 2237 103 10 3 chr2 28642251 28642541 -222045313 + AluSq SINE Alu 1 292 -21 186 43 0 0 chr2 28642548 28642571 -222045283 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1840 168 13 3 chr2 28642719 28643028 -222044826 + AluJb SINE Alu 1 312 0 273 278 33 61 chr2 28643197 28643377 -222044477 - MER89 LTR ERV1 -20 539 365 870 284 209 46 chr2 28643918 28644044 -222043810 - L2 LINE L2 0 3272 3168 220 0 0 79 chr2 28644044 28644082 -222043772 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2054 117 7 0 chr2 28644092 28644365 -222043489 - AluJo SINE Alu -36 276 2 870 284 209 46 chr2 28644365 28645470 -222042384 - L2 LINE L2 -111 3161 1842 218 333 73 10 chr2 28645863 28645959 -222041895 + MIR SINE MIR 16 117 -145 1206 139 0 0 chr2 28646130 28646295 -222041559 + AluJb SINE Alu 5 169 -143 226 284 0 40 chr2 28646777 28646851 -222041003 + MIR3 SINE MIR 104 174 -34 245 264 44 55 chr2 28647379 28647470 -222040384 + MIR SINE MIR 168 257 -5 200 309 79 24 chr2 28647906 28648032 -222039822 - MIR3 SINE MIR -67 141 9 958 212 6 17 chr2 28648289 28648468 -222039386 + MER5B DNA MER1_type 1 177 -1 530 274 16 0 chr2 28648697 28648821 -222039033 - L2 LINE L2 0 3313 3188 202 293 0 37 chr2 28649206 28649288 -222038566 - L2 LINE L2 0 3272 3194 959 214 0 0 chr2 28649716 28649889 -222037965 + FAM SINE Alu 1 173 -12 423 239 74 25 chr2 28650159 28650322 -222037532 + MER112 DNA MER1_type 79 249 -11 1824 102 40 7 chr2 28650432 28650731 -222037123 - AluY SINE Alu 0 308 1 777 147 0 39 chr2 28651061 28651190 -222036664 + FLAM_C SINE Alu 2 125 -18 1691 154 42 11 chr2 28652061 28652347 -222035507 - AluJo SINE Alu -17 295 1 400 295 28 13 chr2 28652973 28653144 -222034710 - MIR SINE MIR -59 203 35 2263 80 0 26 chr2 28653837 28654149 -222033705 - AluSx SINE Alu -8 304 1 638 180 0 41 chr2 28654223 28654345 -222033509 + MER63 DNA MER1_type 40 782 -54 474 275 94 0 chr2 28654401 28654550 -222033304 + MIR SINE MIR 100 262 0 343 294 25 34 chr2 28655245 28655364 -222032490 - MIR SINE MIR -70 192 75 210 303 0 15 chr2 28655378 28655444 -222032410 + CT-rich Low_complexity Low_complexity 2 66 0 29 0 0 0 chr2 28655804 28655833 -222032021 + AT_rich Low_complexity Low_complexity 1 29 0 207 255 0 0 chr2 28656991 28657038 -222030816 + (CACG)n Simple_repeat Simple_repeat 1 47 0 1525 195 3 10 chr2 28658706 28658998 -222028856 + AluJo SINE Alu 1 290 -22 357 271 19 77 chr2 28660406 28660561 -222027293 - MIR3 SINE MIR -21 187 42 352 264 118 0 chr2 28661105 28661215 -222026639 + MIR3 SINE MIR 38 160 -48 296 310 21 56 chr2 28661225 28661367 -222026487 + MER5B DNA MER1_type 22 158 -20 504 160 0 0 chr2 28661699 28661774 -222026080 - AluS SINE Alu -235 77 3 1038 241 34 15 chr2 28661781 28662043 -222025811 - L1M4 LINE L1 -1159 4987 4721 1898 157 7 0 chr2 28662078 28662384 -222025470 - AluJo SINE Alu -4 308 1 211 68 0 45 chr2 28663879 28663923 -222023931 + (CA)n Simple_repeat Simple_repeat 2 43 0 447 19 0 0 chr2 28664522 28664574 -222023280 + (TG)n Simple_repeat Simple_repeat 2 53 0 1834 146 0 0 chr2 28664720 28665000 -222022854 + AluJo SINE Alu 5 284 -28 366 298 43 22 chr2 28665073 28665207 -222022647 - MIR SINE MIR -62 146 30 317 298 10 19 chr2 28665786 28665890 -222021964 - MIR SINE MIR -109 153 51 1897 180 24 18 chr2 28666048 28666431 -222021423 + MLT1B LTR MaLR 6 390 0 204 240 20 0 chr2 28666459 28666509 -222021345 + L2 LINE L2 3262 3312 -1 217 280 43 21 chr2 28667348 28667441 -222020413 + MIR SINE MIR 39 133 -129 251 246 39 101 chr2 28667756 28667935 -222019919 + L2 LINE L2 2887 3054 -218 223 146 49 0 chr2 28667952 28667993 -222019861 + (TCTG)n Simple_repeat Simple_repeat 3 45 0 240 313 148 0 chr2 28668059 28668174 -222019680 + L2 LINE L2 3137 3268 -4 279 241 81 23 chr2 28668582 28668669 -222019185 + L2 LINE L2 3159 3250 -22 499 196 47 0 chr2 28668672 28668779 -222019075 + MER94 DNA DNA 2 113 -21 267 103 0 0 chr2 28668790 28668829 -222019025 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 477 317 80 15 chr2 28669063 28669262 -222018592 - MIR SINE MIR -33 229 18 239 337 20 0 chr2 28670232 28670333 -222017521 + MER94 DNA DNA 6 108 -26 255 170 0 0 chr2 28671359 28671406 -222016448 + (TG)n Simple_repeat Simple_repeat 1 47 0 777 231 20 45 chr2 28671950 28672149 -222015705 + MIR SINE MIR 19 212 -50 446 262 41 0 chr2 28672269 28672391 -222015463 - L2 LINE L2 -6 3307 3181 4301 178 71 6 chr2 28672523 28673299 -222014555 + LTR1B LTR ERV1 1 826 0 365 238 0 12 chr2 28673392 28673472 -222014382 - MIR SINE MIR -118 144 66 544 280 192 12 chr2 28673475 28673725 -222014129 - L2 LINE L2 -4 3309 3015 2342 169 42 6 chr2 28673941 28674441 -222013413 - L1MC1 LINE L1 0 6333 5772 1971 152 19 36 chr2 28674441 28674802 -222013052 + THE1A LTR MaLR 1 355 0 2342 169 42 6 chr2 28674802 28674851 -222013003 - L1MC1 LINE L1 -561 5772 5726 1527 171 42 9 chr2 28675446 28675746 -222012108 + L1MB3 LINE L1 5749 6037 -146 2385 89 27 0 chr2 28675746 28676069 -222011785 + L1PA13 LINE L1 5819 6163 0 735 161 42 7 chr2 28676069 28676197 -222011657 + L1MB3 LINE L1 6036 6183 0 406 257 62 0 chr2 28676203 28676316 -222011538 - LTR23 LTR ERV1 -23 414 295 416 65 0 0 chr2 28676317 28676379 -222011475 - Alu SINE Alu -2 308 247 1268 84 39 0 chr2 28676379 28676558 -222011296 + L1PA13 LINE L1 5978 6163 0 735 161 42 7 chr2 28676558 28676686 -222011168 + L1MB3 LINE L1 6036 6183 0 406 257 62 0 chr2 28676692 28676805 -222011049 - LTR23 LTR ERV1 -23 414 295 700 93 0 0 chr2 28676806 28676903 -222010951 - AluSg/x SINE Alu -2 307 211 316 290 30 0 chr2 28677031 28677131 -222010723 - MIR3 SINE MIR -45 163 61 543 250 181 0 chr2 28678063 28678223 -222009631 - MIR SINE MIR -25 237 49 323 298 19 0 chr2 28679091 28679195 -222008659 + L2 LINE L2 2958 3063 -209 1907 203 78 50 chr2 28679591 28680075 -222007779 + MLT1D LTR MaLR 8 505 0 443 287 144 33 chr2 28680114 28680172 -222007682 - MIR SINE MIR -2 260 210 1888 188 28 38 chr2 28680172 28680566 -222007288 - MLT1B LTR MaLR 0 390 1 443 287 144 33 chr2 28680566 28680688 -222007166 - MIR SINE MIR -52 210 60 272 153 3 43 chr2 28680688 28680757 -222007097 - L1P LINE L1 -792 5354 5284 477 50 0 0 chr2 28681612 28681672 -222006182 + (CA)n Simple_repeat Simple_repeat 2 61 0 467 243 0 28 chr2 28681896 28682003 -222005851 - L3 LINE CR1 -59 1518 1415 311 254 136 27 chr2 28682458 28682568 -222005286 + MIR SINE MIR 70 191 -71 207 143 0 0 chr2 28683147 28683182 -222004672 - MIR3 SINE MIR -46 162 128 183 129 0 0 chr2 28685726 28685757 -222002097 + (CAGGG)n Simple_repeat Simple_repeat 4 34 0 570 333 35 53 chr2 28687516 28687589 -222000265 - L3 LINE CR1 -20 1557 1484 1497 218 128 37 chr2 28687589 28688048 -221999806 - MLT1D LTR MaLR -4 501 1 570 333 35 53 chr2 28688048 28688256 -221999598 - L3 LINE CR1 -93 1484 1281 473 186 103 0 chr2 28688458 28688555 -221999299 - MER103 DNA DNA -49 117 11 423 0 0 0 chr2 28689067 28689114 -221998740 + (CA)n Simple_repeat Simple_repeat 2 48 0 218 276 293 9 chr2 28689530 28689646 -221998208 - MIR SINE MIR -14 248 100 590 294 0 12 chr2 28690236 28690406 -221997448 + MIR3 SINE MIR 36 203 -5 181 262 0 0 chr2 28690619 28690661 -221997193 - MIR SINE MIR -65 197 156 492 324 14 12 chr2 28690818 28690990 -221996864 - MIR SINE MIR -69 139 16 265 231 78 24 chr2 28691023 28691138 -221996716 - MIR SINE MIR -72 136 18 232 250 0 0 chr2 28691176 28691228 -221996626 + CT-rich Low_complexity Low_complexity 1 52 0 663 54 0 0 chr2 28691938 28692030 -221995824 + (TG)n Simple_repeat Simple_repeat 2 93 0 693 247 68 54 chr2 28692053 28692282 -221995572 - L1ME3A LINE L1 -10 6160 5925 2172 82 7 7 chr2 28692282 28692574 -221995280 + AluSg SINE Alu 1 292 -18 693 247 68 54 chr2 28692574 28692640 -221995214 - L1ME3A LINE L1 -245 5925 5861 304 300 9 27 chr2 28692646 28692756 -221995098 - L1MC4 LINE L1 -1330 6712 6605 333 286 10 31 chr2 28692804 28693000 -221994854 - L1MC5 LINE L1 -178 7783 7592 333 340 20 50 chr2 28693237 28693437 -221994417 - L3 LINE CR1 -171 1406 1213 2432 81 0 0 chr2 28693860 28694169 -221993685 + AluSg SINE Alu 1 309 -1 738 300 27 9 chr2 28694213 28694436 -221993418 - MLT1K LTR MaLR -11 577 351 713 239 58 66 chr2 28694467 28694710 -221993144 - MLT1K LTR MaLR -305 283 43 754 227 52 35 chr2 28694738 28694967 -221992887 + MIR SINE MIR 29 261 -1 261 313 27 53 chr2 28695400 28695550 -221992304 - MIR3 SINE MIR -47 161 16 210 194 56 42 chr2 28696792 28696864 -221990990 + CT-rich Low_complexity Low_complexity 5 77 0 299 314 141 6 chr2 28697102 28697258 -221990596 + MIR SINE MIR 72 248 -14 27 62 0 0 chr2 28697728 28697776 -221990078 + GC_rich Low_complexity Low_complexity 1 48 0 247 219 164 0 chr2 28698607 28698680 -221989174 - MIR SINE MIR -55 153 69 186 319 55 22 chr2 28698691 28698782 -221989072 - MIR SINE MIR -59 203 110 507 254 98 23 chr2 28698870 28699043 -221988811 - MIR3 SINE MIR -22 186 1 21 0 0 0 chr2 28699149 28699170 -221988684 + AT_rich Low_complexity Low_complexity 1 21 0 27 92 0 0 chr2 28699385 28699461 -221988393 + GC_rich Low_complexity Low_complexity 1 76 0 231 172 17 17 chr2 28700119 28700177 -221987677 + CT-rich Low_complexity Low_complexity 2 59 0 195 100 0 0 chr2 28700310 28700340 -221987514 + (CGAG)n Simple_repeat Simple_repeat 1 30 0 261 83 0 0 chr2 28700355 28700391 -221987463 + (GA)n Simple_repeat Simple_repeat 2 37 0 441 0 0 0 chr2 28703788 28703837 -221984017 + (CA)n Simple_repeat Simple_repeat 2 50 0 342 24 0 0 chr2 28704178 28704220 -221983634 + L1PA6 LINE L1 6106 6147 -7 738 268 33 47 chr2 28704644 28704920 -221982934 - MARNA DNA Mariner -49 537 266 914 213 137 0 chr2 28706743 28706940 -221980914 + MER58A DNA MER1_type 1 224 0 183 80 0 0 chr2 28708114 28708139 -221979715 + (ATGGTG)n Simple_repeat Simple_repeat 6 30 0 585 276 5 43 chr2 28708157 28708342 -221979512 + MER5B DNA MER1_type 1 178 0 225 312 172 6 chr2 28708363 28708520 -221979334 - MIR SINE MIR -57 205 23 658 298 78 8 chr2 28709725 28709967 -221977887 + MIR SINE MIR 4 262 0 248 297 0 0 chr2 28711505 28711579 -221976275 + MIR SINE MIR 77 150 -112 282 304 108 57 chr2 28712147 28712341 -221975513 - MIR3 SINE MIR 0 208 5 2253 104 0 19 chr2 28713010 28713327 -221974527 - AluSx SINE Alu -1 311 1 593 271 6 57 chr2 28713384 28713561 -221974293 - MIR3 SINE MIR -32 176 9 225 331 58 61 chr2 28714151 28714462 -221973392 + L2 LINE L2 2963 3272 0 189 206 132 44 chr2 28714629 28714697 -221973157 - MIR3 SINE MIR -29 179 106 5666 82 113 95 chr2 28714697 28716172 -221971682 + pTR5 LTR ERV1 753 2438 0 1619 147 23 37 chr2 28716185 28716484 -221971370 + AluJo SINE Alu 1 295 -17 25 0 0 0 chr2 28716550 28716575 -221971279 + AT_rich Low_complexity Low_complexity 1 25 0 265 291 189 50 chr2 28716584 28717045 -221970809 + L2 LINE L2 1929 2453 -861 613 111 0 0 chr2 28717101 28717191 -221970663 - LTR12 LTR ERV1 0 714 625 364 206 76 92 chr2 28717191 28717322 -221970532 - LTR30 LTR ERV1 -71 723 544 718 173 129 7 chr2 28717443 28717582 -221970272 - LTR12 LTR ERV1 -549 165 10 215 236 85 38 chr2 28717582 28717688 -221970166 + L2 LINE L2 2551 2661 -653 247 329 0 24 chr2 28718418 28718503 -221969351 + L2 LINE L2 3187 3269 -3 252 305 76 34 chr2 28718696 28718814 -221969040 + L2 LINE L2 3191 3313 0 2262 101 0 0 chr2 28720511 28720818 -221967036 - AluSq SINE Alu -6 307 1 192 380 0 0 chr2 28721506 28721619 -221966235 + MIR3 SINE MIR 78 190 -18 2142 112 3 7 chr2 28721644 28721949 -221965905 + AluSx SINE Alu 1 304 -8 379 291 39 0 chr2 28721985 28722088 -221965766 - L2 LINE L2 -8 3305 3199 726 292 18 9 chr2 28722251 28722470 -221965384 + MIR SINE MIR 21 241 -21 232 118 0 0 chr2 28726470 28726504 -221961350 - L2 LINE L2 -29 3284 3251 25 0 0 0 chr2 28727133 28727158 -221960696 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 28727243 28727266 -221960588 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr2 28727728 28727749 -221960105 + (T)n Simple_repeat Simple_repeat 1 21 0 188 35 35 0 chr2 28727878 28727907 -221959947 + (TTG)n Simple_repeat Simple_repeat 2 31 0 1781 188 0 0 chr2 28728849 28729152 -221958702 - AluJb SINE Alu -9 303 1 396 305 14 31 chr2 28729205 28729381 -221958473 + MIR SINE MIR 20 198 -64 30 0 0 0 chr2 28729410 28729440 -221958414 + AT_rich Low_complexity Low_complexity 1 30 0 2186 119 0 0 chr2 28729479 28729789 -221958065 - AluSx SINE Alu -2 310 1 2237 101 0 16 chr2 28731014 28731332 -221956522 - AluSq SINE Alu 0 313 1 1368 149 16 29 chr2 28731877 28732119 -221955735 - L1MB5 LINE L1 -9 6165 5927 2119 129 3 0 chr2 28732337 28732648 -221955206 - AluSx SINE Alu 0 312 1 195 232 29 29 chr2 28732892 28732961 -221954893 - L2 LINE L2 -4 3309 3241 182 231 77 15 chr2 28733029 28733094 -221954760 - L2 LINE L2 -59 3254 3186 1881 156 0 7 chr2 28733220 28733527 -221954327 + AluJb SINE Alu 1 305 -7 293 282 29 19 chr2 28733703 28733806 -221954048 - L2 LINE L2 -2 3311 3208 425 334 168 20 chr2 28734402 28734998 -221952856 + L2 LINE L2 1328 2011 -1303 195 316 125 20 chr2 28735021 28735173 -221952681 + L2 LINE L2 2461 2628 -686 1780 169 3 0 chr2 28735561 28735862 -221951992 + AluJo SINE Alu 1 302 -10 1879 173 5 40 chr2 28735863 28736238 -221951616 + L1MC1 LINE L1 5526 5887 -446 1269 175 0 9 chr2 28736238 28736445 -221951409 + L1MC1 LINE L1 6118 6332 -1 1324 149 8 25 chr2 28736449 28736684 -221951170 + AluJb SINE Alu 77 307 -5 199 289 11 67 chr2 28736769 28736859 -221950995 - MIR3 SINE MIR -49 159 75 225 256 103 0 chr2 28736900 28736978 -221950876 + MIR SINE MIR 107 192 -70 620 247 86 6 chr2 28737429 28737591 -221950263 + MIR SINE MIR 23 197 -65 833 162 14 7 chr2 28737699 28737847 -221950007 - AluJo SINE Alu -163 149 1 23 0 0 0 chr2 28737854 28737877 -221949977 + AT_rich Low_complexity Low_complexity 1 23 0 204 239 0 0 chr2 28738699 28738745 -221949109 - L2 LINE L2 0 3272 3227 184 327 0 0 chr2 28738784 28738836 -221949018 - L2 LINE L2 0 3272 3221 565 283 151 4 chr2 28739124 28739382 -221948472 - L2 LINE L2 -22 3291 2996 2056 119 0 3 chr2 28740180 28740508 -221947346 - AluSx SINE Alu 0 312 4 255 103 0 0 chr2 28741593 28741632 -221946222 + (TCC)n Simple_repeat Simple_repeat 1 39 0 204 246 154 18 chr2 28742047 28742157 -221945697 + MIR3 SINE MIR 3 127 -81 760 222 153 24 chr2 28742838 28742894 -221944960 + MER46C DNA MER2_type 4 51 -287 2365 72 0 3 chr2 28742894 28743199 -221944655 - AluSg SINE Alu -6 304 1 760 222 153 24 chr2 28743199 28743430 -221944424 + MER46C DNA MER2_type 51 328 -10 503 270 176 18 chr2 28743437 28743659 -221944195 - MIR SINE MIR -2 260 4 288 200 53 13 chr2 28743659 28743731 -221944123 - MIR SINE MIR -73 135 61 180 323 195 22 chr2 28744277 28744503 -221943351 - L2 LINE L2 -3 3269 3005 1915 102 30 49 chr2 28744923 28745227 -221942627 - AluSx SINE Alu -14 298 1 2145 175 28 28 chr2 28745247 28745619 -221942235 + L1PA16 LINE L1 5767 6141 -25 2109 91 3 36 chr2 28745619 28745926 -221941928 - AluSx SINE Alu -15 297 1 2145 175 28 28 chr2 28745926 28745953 -221941901 + L1PA16 LINE L1 6140 6166 0 266 282 70 50 chr2 28745983 28746128 -221941726 + L1MC5 LINE L1 7676 7829 -132 1987 154 0 0 chr2 28746128 28746433 -221941421 + AluJo SINE Alu 1 305 -7 266 282 70 50 chr2 28746433 28746528 -221941326 + L1MC5 LINE L1 7829 7921 -40 259 313 62 16 chr2 28746769 28746961 -221940893 + L2 LINE L2 2467 2667 -647 189 364 56 19 chr2 28748617 28748779 -221939075 + L2 LINE L2 2851 3018 -254 432 253 95 32 chr2 28748872 28749030 -221938824 + MIR SINE MIR 9 176 -86 2164 104 7 0 chr2 28749051 28749350 -221938504 - AluY SINE Alu -10 301 1 2071 86 79 0 chr2 28749350 28749629 -221938225 - AluSq SINE Alu -8 305 5 264 356 37 21 chr2 28750245 28750436 -221937418 + MIR SINE MIR 35 228 -34 226 324 124 28 chr2 28752323 28752468 -221935386 - MIR3 SINE MIR -9 199 41 364 318 9 0 chr2 28752952 28753062 -221934792 + MIR3 SINE MIR 76 187 -21 1828 173 7 0 chr2 28753226 28753526 -221934328 + AluJo SINE Alu 1 302 -10 753 265 146 0 chr2 28753842 28754061 -221933793 + MIR SINE MIR 2 252 -10 285 29 0 0 chr2 28754062 28754096 -221933758 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 441 326 83 38 chr2 28756205 28756518 -221931336 + MLT1K LTR MaLR 10 336 -252 1774 242 35 24 chr2 28756528 28756990 -221930864 + MLT1C LTR MaLR 1 467 0 2074 137 0 3 chr2 28808632 28808952 -221878902 + AluSx SINE Alu 1 319 0 2313 110 0 0 chr2 28809594 28809893 -221877961 + AluSx SINE Alu 1 299 -13 271 311 133 39 chr2 28810116 28810296 -221877558 + MIR SINE MIR 46 242 -20 195 294 88 15 chr2 28811440 28811508 -221876346 + MIR SINE MIR 46 118 -144 261 296 63 35 chr2 28813209 28813351 -221874503 + MIR SINE MIR 4 141 -67 250 346 68 6 chr2 28814413 28814575 -221873279 + L3b LINE CR1 1313 1484 -99 1903 166 3 10 chr2 28814665 28814973 -221872881 + AluJb SINE Alu 5 310 -2 757 213 13 0 chr2 28816368 28816518 -221871336 - MER5A DNA MER1_type -2 187 36 1578 72 0 10 chr2 28817149 28817344 -221870510 - AluSc SINE Alu -1 308 116 2257 115 0 10 chr2 28817915 28818220 -221869634 - AluSx SINE Alu -10 302 1 2141 118 0 41 chr2 28818270 28818584 -221869270 - AluSg SINE Alu -9 301 1 695 306 46 0 chr2 28819371 28819587 -221868267 + MIR SINE MIR 37 262 0 183 289 0 0 chr2 28819607 28819652 -221868202 - L2 LINE L2 0 3272 3228 * 229 164 18 91 chr2 28819627 28819682 -221868172 + L2 LINE L2 3171 3221 -92 208 216 0 0 chr2 28819708 28819745 -221868109 + (TGGA)n Simple_repeat Simple_repeat 1 37 0 563 227 18 9 chr2 28820189 28820299 -221867555 - L2 LINE L2 0 3313 3203 366 322 116 22 chr2 28820302 28820569 -221867285 - L2 LINE L2 -577 2737 2446 198 225 0 0 chr2 28820928 28820968 -221866886 - MIR SINE MIR -10 252 213 197 156 31 0 chr2 28821516 28821548 -221866306 - L2 LINE L2 -94 3219 3187 308 218 26 64 chr2 28821986 28822064 -221865790 + L1MC4 LINE L1 6628 6702 -1340 1482 163 71 39 chr2 28822080 28822363 -221865491 - AluJo SINE Alu -20 292 1 2355 107 0 0 chr2 28822886 28823186 -221864668 - AluSx SINE Alu -12 300 1 238 161 0 71 chr2 28823400 28823456 -221864398 + L2 LINE L2 3262 3313 0 1883 150 27 0 chr2 28823603 28823897 -221863957 - AluJb SINE Alu 0 312 11 250 186 0 0 chr2 28825793 28825836 -221862018 - 5S rRNA rRNA -78 43 1 294 87 0 0 chr2 28825888 28825934 -221861920 + (TG)n Simple_repeat Simple_repeat 2 47 0 231 36 0 0 chr2 28826439 28826467 -221861387 + (TG)n Simple_repeat Simple_repeat 2 29 0 891 152 0 0 chr2 28826637 28826769 -221861085 - FLAM_C SINE Alu -1 132 1 574 138 21 0 chr2 28826774 28826868 -221860986 - FRAM SINE Alu -14 162 67 1196 141 10 26 chr2 28826941 28827133 -221860721 + MER5A DNA MER1_type 1 189 0 2207 98 0 0 chr2 28827485 28827770 -221860084 - AluSx SINE Alu -1 311 27 910 123 58 14 chr2 28828263 28828401 -221859453 + AluJb SINE Alu 156 299 -13 918 174 0 4 chr2 28828401 28828574 -221859280 + L1MB5 LINE L1 5823 5982 -192 183 238 124 97 chr2 28828704 28829002 -221858852 + L2 LINE L2 2964 3269 -44 3545 160 6 21 chr2 28829072 28829353 -221858501 + L1MB5 LINE L1 5551 5835 -339 1914 144 13 10 chr2 28829353 28829651 -221858203 + AluJb SINE Alu 1 299 -13 3545 160 6 21 chr2 28829651 28830001 -221857853 + L1MB5 LINE L1 5835 6173 -1 2369 97 0 0 chr2 28830006 28830304 -221857550 + AluSc SINE Alu 1 298 -11 209 222 28 130 chr2 28831085 28831193 -221856661 - MIR SINE MIR -73 135 39 376 287 44 55 chr2 28831648 28831702 -221856152 - MIR SINE MIR -78 184 131 1582 194 14 21 chr2 28831702 28831990 -221855864 + AluJo SINE Alu 1 286 -26 376 287 44 55 chr2 28831990 28832116 -221855738 - MIR SINE MIR -131 131 6 453 251 171 24 chr2 28833416 28833627 -221854227 + MIR SINE MIR 21 262 0 440 288 7 46 chr2 28833612 28833765 -221854089 - MIR SINE MIR -100 162 16 * 2375 72 0 7 chr2 28835203 28835495 -221852359 - AluSc SINE Alu 0 309 20 231 266 31 16 chr2 28836521 28836585 -221851269 - L2 LINE L2 -270 3002 2938 440 389 57 9 chr2 28836599 28836828 -221851026 - L3 LINE CR1 -58 1519 1280 6968 202 64 26 chr2 28837197 28837426 -221850428 + L1MB8 LINE L1 3209 3428 -2750 2609 67 0 3 chr2 28837426 28837738 -221850116 + AluY SINE Alu 1 311 0 6968 202 64 26 chr2 28837738 28838246 -221849608 + L1MB8 LINE L1 3428 3915 -2263 2041 143 7 0 chr2 28838246 28838547 -221849307 + AluSx SINE Alu 1 303 -9 6968 202 64 26 chr2 28838547 28840670 -221847184 + L1MB8 LINE L1 3915 6173 -5 5750 71 13 22 chr2 28841939 28842123 -221845731 - L1PB2 LINE L1 -2 6149 5965 2161 121 0 44 chr2 28842123 28842438 -221845416 - AluSx SINE Alu -11 301 1 5750 71 13 22 chr2 28842438 28843114 -221844740 - L1PB2 LINE L1 -186 5965 5297 1950 109 69 0 chr2 28843315 28843591 -221844263 - AluY SINE Alu -15 296 2 221 323 0 0 chr2 28843924 28843986 -221843868 - MIR SINE MIR -110 152 91 2262 114 0 0 chr2 28844189 28844479 -221843375 + AluSx SINE Alu 1 290 -22 322 311 8 25 chr2 28844527 28844649 -221843205 - MIR3 SINE MIR -43 165 46 806 278 24 0 chr2 28844761 28844973 -221842881 - MIR SINE MIR -13 249 33 228 164 0 82 chr2 28845050 28845111 -221842743 + LTR65 LTR ERV1 259 314 -355 2186 134 3 0 chr2 28845301 28845600 -221842254 + AluSg SINE Alu 1 300 -10 300 272 82 95 chr2 28846074 28846306 -221841548 - L2 LINE L2 -23 3249 3021 338 158 0 0 chr2 28846306 28846363 -221841491 + MER66B LTR ERV1 292 348 -138 266 215 118 11 chr2 28848003 28848096 -221839758 - L2 LINE L2 -38 3234 3132 2306 114 3 0 chr2 28848173 28848472 -221839382 + AluSx SINE Alu 1 300 -12 197 229 244 8 chr2 28849088 28849219 -221838635 - MIR3 SINE MIR -4 204 43 462 18 0 0 chr2 28849223 28849278 -221838576 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 2164 121 27 3 chr2 28849426 28849724 -221838130 + AluJb SINE Alu 1 305 -7 2097 146 78 43 chr2 28850872 28850930 -221836924 + Tigger4(Zombi) DNA MER2_type 1 55 -2676 2292 102 7 3 chr2 28850930 28851225 -221836629 - AluSx SINE Alu -16 296 1 2097 146 78 43 chr2 28851225 28851563 -221836291 + Tigger4(Zombi) DNA MER2_type 55 411 -2320 461 165 12 0 chr2 28851575 28851660 -221836194 + Tigger4(Zombi) DNA MER2_type 2646 2731 0 794 272 53 4 chr2 28852575 28852821 -221835033 + MIR SINE MIR 2 259 -3 2372 98 0 3 chr2 28853010 28853317 -221834537 - AluSx SINE Alu -6 306 1 2067 151 0 3 chr2 28854477 28854789 -221833065 - AluJb SINE Alu -1 311 1 2061 133 27 0 chr2 28855075 28855368 -221832486 + AluJb SINE Alu 2 302 -10 469 271 180 59 chr2 28855410 28855665 -221832189 - LTR67 LTR ERVL -263 294 9 2419 61 0 14 chr2 28856624 28856918 -221830936 + AluSg SINE Alu 1 290 -20 268 271 209 31 chr2 28859251 28859380 -221828474 + MER5B DNA MER1_type 2 153 -25 204 100 0 0 chr2 28859393 28859423 -221828431 + L3 LINE CR1 1543 1572 -5 200 198 35 23 chr2 28860100 28860186 -221827668 + CT-rich Low_complexity Low_complexity 3 89 0 445 229 41 41 chr2 28863220 28863342 -221824512 - MER103 DNA DNA -22 144 23 2529 66 0 3 chr2 28864722 28865024 -221822830 + AluY SINE Alu 1 301 -10 369 268 105 13 chr2 28865477 28865630 -221822224 + MIR SINE MIR 86 252 -10 2012 137 11 0 chr2 28867497 28867782 -221820072 - AluSx SINE Alu -24 288 1 1876 171 3 7 chr2 28867782 28868075 -221819779 - AluJb SINE Alu -17 295 4 564 323 7 48 chr2 28868698 28868967 -221818887 + L3 LINE CR1 1319 1576 -1 311 65 22 0 chr2 28869323 28869369 -221818485 + (CA)n Simple_repeat Simple_repeat 1 47 0 209 373 49 0 chr2 28870453 28870555 -221817299 - MER91C DNA MER1_type -33 107 1 205 231 0 0 chr2 28871307 28871346 -221816508 - MIR SINE MIR -21 241 203 299 287 195 20 chr2 28872814 28873009 -221814845 - MIR SINE MIR -2 260 32 360 322 46 15 chr2 28874053 28874301 -221813553 - MIR SINE MIR -3 259 1 1768 181 3 19 chr2 28876774 28877088 -221810766 - AluJo SINE Alu -3 309 1 305 260 24 55 chr2 28877820 28877947 -221809907 - L3 LINE CR1 -1 1576 1454 1143 92 0 0 chr2 28877966 28878130 -221809724 - L1PA8 LINE L1 -2 6170 6007 811 132 0 29 chr2 28878183 28878319 -221809535 - FLAM_C SINE Alu -1 132 1 197 300 180 34 chr2 28878425 28878658 -221809196 - L3 LINE CR1 -374 1203 937 280 329 45 19 chr2 28878676 28878831 -221809023 - L3 LINE CR1 -146 1431 1273 2341 91 0 19 chr2 28879727 28880036 -221807818 + AluY SINE Alu 1 303 -8 205 305 9 48 chr2 28880272 28880377 -221807477 + MIR SINE MIR 53 153 -55 1799 153 16 45 chr2 28880471 28880784 -221807070 - AluSx SINE Alu -6 306 3 1803 184 0 17 chr2 28880789 28881088 -221806766 - AluJo SINE Alu -13 299 6 831 319 66 7 chr2 28882703 28883298 -221804556 - L2 LINE L2 -8 3305 2664 227 305 85 34 chr2 28883559 28883677 -221804177 - L2 LINE L2 -1 3312 3189 2644 135 23 15 chr2 28883770 28884244 -221803610 + L1MA5 LINE L1 5821 6298 -2 408 159 0 0 chr2 28884277 28884346 -221803508 + MER5A DNA MER1_type 41 109 -80 26 64 0 0 chr2 28885102 28885149 -221802705 + AT_rich Low_complexity Low_complexity 1 47 0 1308 98 5 10 chr2 28886906 28887110 -221800744 - L1PA13 LINE L1 -1 6162 5960 209 301 72 0 chr2 28889047 28889130 -221798724 - MIR SINE MIR -168 94 6 210 217 22 0 chr2 28889713 28889759 -221798095 + (TTA)n Simple_repeat Simple_repeat 3 49 0 699 276 65 17 chr2 28890088 28890320 -221797534 + MIR SINE MIR 6 248 -14 191 291 44 76 chr2 28890400 28890475 -221797379 - L2 LINE L2 -1 3312 3236 2122 135 10 6 chr2 28890475 28890786 -221797068 + AluSq SINE Alu 1 312 -1 191 291 44 76 chr2 28890786 28890868 -221796986 - L2 LINE L2 -77 3236 3160 546 255 14 7 chr2 28890979 28891124 -221796730 - MIR3 SINE MIR -22 186 41 540 208 39 32 chr2 28891616 28891632 -221796222 - L1MA10 LINE L1 0 6334 6319 1205 238 34 47 chr2 28891632 28891688 -221796166 - L1ME1 LINE L1 -5 6161 6106 2024 120 21 7 chr2 28891688 28891971 -221795883 + AluJb SINE Alu 1 287 -25 1205 238 34 47 chr2 28891971 28892302 -221795552 - L1ME1 LINE L1 -60 6106 5783 333 329 43 31 chr2 28892430 28892591 -221795263 + L3b LINE CR1 1110 1272 -311 2504 87 0 0 chr2 28893854 28894164 -221793690 - AluSx SINE Alu -2 310 1 188 250 0 0 chr2 28895846 28895886 -221791968 - L2 LINE L2 -4 3268 3229 256 250 78 0 chr2 28896733 28896797 -221791057 + MIR SINE MIR 77 145 -117 371 147 11 105 chr2 28896825 28896920 -221790934 + MIR3 SINE MIR 97 182 -26 268 277 128 21 chr2 28897230 28897324 -221790530 + MIR3 SINE MIR 96 199 -9 491 239 26 8 chr2 28897410 28897527 -221790327 + MIR SINE MIR 64 182 -80 1003 191 6 0 chr2 28898876 28899049 -221788805 + FRAM SINE Alu 1 174 -2 1799 104 123 4 chr2 28900376 28900644 -221787210 + AluSg SINE Alu 1 300 0 265 278 194 37 chr2 28901173 28901364 -221786490 + MIR SINE MIR 31 251 -11 183 207 121 0 chr2 28902287 28902345 -221785509 + L3 LINE CR1 591 655 -922 1963 146 3 13 chr2 28902493 28902801 -221785053 + AluJb SINE Alu 1 305 -7 382 302 141 0 chr2 28903192 28903341 -221784513 - MIR3 SINE MIR -9 199 30 242 244 0 0 chr2 28903807 28903848 -221784006 + MER5B DNA MER1_type 3 43 -135 526 97 43 0 chr2 28903853 28903946 -221783908 + (TATG)n Simple_repeat Simple_repeat 2 98 0 2027 133 0 18 chr2 28903946 28904231 -221783623 - AluSx SINE Alu -32 280 1 1595 237 49 56 chr2 28904260 28904872 -221782982 + L1ME3A LINE L1 5558 6165 -5 2285 114 3 10 chr2 28904879 28905186 -221782668 + AluSq SINE Alu 1 305 -8 545 199 37 52 chr2 28905191 28905327 -221782527 - MER5B DNA MER1_type -44 134 1 249 296 105 42 chr2 28905327 28905756 -221782098 + L2 LINE L2 2660 3110 -162 1360 292 221 28 chr2 28905893 28906739 -221781115 - L2 LINE L2 0 3313 2632 1547 105 0 24 chr2 28906739 28906949 -221780905 + AluSg/x SINE Alu 90 294 -16 1360 292 221 28 chr2 28906949 28907495 -221780359 - L2 LINE L2 -681 2632 1628 2213 97 7 0 chr2 28909193 28909482 -221778372 + AluSx SINE Alu 1 291 -21 261 326 22 22 chr2 28909490 28909582 -221778272 - L2 LINE L2 -27 3245 3154 213 275 14 43 chr2 28911369 28911438 -221776416 - L2 LINE L2 0 3272 3206 527 178 68 0 chr2 28911869 28911987 -221775867 + L1MB5 LINE L1 6049 6174 0 188 248 88 88 chr2 28912057 28912170 -221775684 + MIR SINE MIR 46 158 -104 341 218 162 73 chr2 28912736 28912970 -221774884 + L1MEd LINE L1 467 721 -5398 328 264 34 0 chr2 28913528 28913615 -221774239 - MIR SINE MIR -33 175 83 2357 97 0 0 chr2 28913835 28914134 -221773720 - AluSx SINE Alu -12 300 2 1192 86 114 68 chr2 28914204 28914299 -221773555 - MER30 DNA MER1_type 0 230 141 198 0 0 0 chr2 28914299 28914321 -221773533 + (TG)n Simple_repeat Simple_repeat 1 22 0 1192 86 114 68 chr2 28914321 28914445 -221773409 - MER30 DNA MER1_type -89 141 1 455 236 110 0 chr2 28914756 28914883 -221772971 - MIR SINE MIR -6 256 116 2086 144 0 10 chr2 28915173 28915479 -221772375 - AluJb SINE Alu -9 303 1 1276 108 216 34 chr2 28915484 28915780 -221772074 - Tigger7 DNA MER2_type -22 2465 2116 284 214 0 0 chr2 28915776 28915832 -221772022 - Tigger7 DNA MER2_type -493 57 2 * 902 176 132 16 chr2 28915840 28916090 -221771764 + LTR37B LTR ERV1 6 284 -184 183 202 277 67 chr2 28916567 28916686 -221771168 + MIR SINE MIR 116 259 -3 954 220 23 0 chr2 28917327 28917500 -221770354 - MER45A DNA AcHobo -1 177 1 360 277 30 0 chr2 28917957 28918058 -221769796 + MIR SINE MIR 159 262 0 1792 208 184 123 chr2 28918359 28918414 -221769440 - Charlie7 DNA MER1_type -41 2571 2521 1919 147 41 32 chr2 28918414 28918545 -221769309 + MER2 DNA MER2_type 1 129 -215 1851 120 62 38 chr2 28918545 28918836 -221769018 - AluSq SINE Alu -15 298 1 1919 147 41 32 chr2 28918836 28919045 -221768809 + MER2 DNA MER2_type 129 344 0 1792 208 184 123 chr2 28919045 28919428 -221768426 - Charlie7 DNA MER1_type -91 2521 2163 2159 107 0 4 chr2 28919428 28919708 -221768146 - AluSg SINE Alu -31 279 1 1792 208 184 123 chr2 28919708 28920972 -221766882 - Charlie7 DNA MER1_type -449 2163 756 2205 120 0 7 chr2 28920972 28921272 -221766582 + AluSx SINE Alu 3 300 -12 1792 208 184 123 chr2 28921272 28921324 -221766530 - Charlie7 DNA MER1_type -1856 756 709 2298 111 3 0 chr2 28921509 28921815 -221766039 - AluSg SINE Alu -3 307 1 818 234 233 54 chr2 28921815 28922408 -221765446 - Charlie7 DNA MER1_type -1879 733 35 447 301 7 33 chr2 28923218 28923371 -221764483 + MER5A DNA MER1_type 13 161 -28 740 183 8 0 chr2 28923719 28923845 -221764009 + FLAM_C SINE Alu 1 127 -16 2161 138 0 19 chr2 28923963 28924142 -221763712 - AluSx SINE Alu 0 312 131 2310 114 0 9 chr2 28924142 28924457 -221763397 - AluSq SINE Alu -1 312 1 185 0 0 39 chr2 28924457 28924483 -221763371 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2157 117 7 0 chr2 28924483 28924766 -221763088 - AluSq SINE Alu -28 285 1 2161 138 0 19 chr2 28924766 28924902 -221762952 - AluSx SINE Alu -178 134 1 801 179 87 0 chr2 28925893 28926066 -221761788 - MER53 DNA DNA 0 189 2 2198 138 0 0 chr2 28926152 28926456 -221761398 + AluSx SINE Alu 1 304 -8 373 322 112 13 chr2 28926802 28926954 -221760900 + MIR SINE MIR 2 168 -94 1819 198 75 19 chr2 28926972 28927436 -221760418 - L1ME1 LINE L1 -211 5955 5466 401 319 43 0 chr2 28927436 28927552 -221760302 + MIR SINE MIR 21 141 -121 206 339 0 0 chr2 28928278 28928334 -221759520 - MER5A DNA MER1_type -71 118 63 855 161 0 22 chr2 28928343 28928480 -221759374 + AluJb SINE Alu 1 134 -178 22 0 0 0 chr2 28928520 28928542 -221759312 + AT_rich Low_complexity Low_complexity 1 22 0 467 290 53 38 chr2 28928581 28928712 -221759142 + MER5A DNA MER1_type 1 133 -56 1736 144 36 7 chr2 28928712 28929017 -221758837 - AluSx SINE Alu 0 313 1 2199 105 13 20 chr2 28929048 28929353 -221758501 + AluSx SINE Alu 1 303 -9 405 261 63 14 chr2 28929585 28929727 -221758127 - MER103 DNA DNA -4 162 14 346 242 30 68 chr2 28930510 28930642 -221757212 + MIR SINE MIR 70 196 -66 415 324 68 0 chr2 28931121 28931269 -221756585 + MIR SINE MIR 13 170 -92 231 310 42 0 chr2 28931823 28931894 -221755960 + MER5A DNA MER1_type 116 189 0 348 271 146 0 chr2 28931981 28932077 -221755777 - L2 LINE L2 -5 3308 3199 1923 156 190 46 chr2 28932295 28932795 -221755059 + LTR18B LTR ERVL 1 572 -42 362 105 12 93 chr2 28932788 28932874 -221754980 + LTR18A LTR ERVL 279 357 0 * 195 175 32 16 chr2 28932906 28932969 -221754885 + CT-rich Low_complexity Low_complexity 4 67 0 3439 81 32 6 chr2 28933923 28934392 -221753462 - L1PA10 LINE L1 -16 6152 5672 306 276 82 41 chr2 28934592 28934762 -221753092 - MIR SINE MIR -75 187 11 2596 72 3 0 chr2 28935922 28936229 -221751625 + AluSg SINE Alu 1 308 -2 855 158 82 0 chr2 28936761 28936907 -221750947 - MER5A DNA MER1_type -29 160 3 924 82 0 0 chr2 28937374 28937484 -221750370 - AluSq/x SINE Alu -202 110 1 243 247 0 49 chr2 28937486 28937567 -221750287 + MLT1J LTR MaLR 429 505 -6 1145 150 0 0 chr2 28937786 28937953 -221749901 + AluSg/x SINE Alu 134 300 -12 974 158 228 0 chr2 28938100 28938341 -221749513 + L1MB2 LINE L1 5835 6130 -41 1867 143 0 21 chr2 28938341 28938627 -221749227 + AluSx SINE Alu 1 280 -32 217 331 43 31 chr2 28940006 28940169 -221747685 - L2 LINE L2 -1285 2029 1865 254 214 0 0 chr2 28940172 28940214 -221747640 + MER91B DNA MER1_type 1 42 -98 2345 99 21 51 chr2 28940236 28940412 -221747442 + THE1B LTR MaLR 1 181 -183 2313 90 16 16 chr2 28940412 28940735 -221747119 + L1PA10 LINE L1 5846 6168 0 2345 99 21 51 chr2 28940735 28940933 -221746921 + THE1B LTR MaLR 181 364 0 520 237 35 0 chr2 28940945 28941059 -221746795 + MER91B DNA MER1_type 73 190 0 1562 216 58 21 chr2 28941150 28941530 -221746324 - MLT1F1 LTR MaLR 0 567 174 300 200 0 0 chr2 28941530 28941595 -221746259 + G-rich Low_complexity Low_complexity 1 65 0 523 252 57 25 chr2 28941604 28941763 -221746091 - MLT1F1 LTR MaLR -369 173 10 249 307 67 0 chr2 28942993 28943068 -221744786 + L2 LINE L2 3168 3247 -25 1909 147 7 23 chr2 28943301 28943608 -221744246 + AluJo SINE Alu 11 312 0 368 299 21 0 chr2 28943654 28943751 -221744103 + L2 LINE L2 3168 3266 -6 524 229 0 89 chr2 28944096 28944253 -221743601 + MIR3 SINE MIR 66 208 0 315 308 90 14 chr2 28944482 28944620 -221743234 + MIR3 SINE MIR 3 151 -69 2226 83 21 0 chr2 28944781 28945071 -221742783 - AluSq SINE Alu -17 296 1 379 271 0 9 chr2 28945190 28945297 -221742557 + MIR SINE MIR 59 164 -98 346 275 148 27 chr2 28945645 28945794 -221742060 + MER91A DNA MER1_type 20 186 -10 808 177 78 5 chr2 28947252 28947444 -221740410 - MER115 DNA AcHobo -8 685 480 631 262 11 47 chr2 28947506 28947697 -221740157 - MER115 DNA AcHobo -324 369 186 613 174 0 0 chr2 28947784 28947876 -221739978 + FRAM SINE Alu 1 92 -84 469 290 16 0 chr2 28947877 28948001 -221739853 - MER115 DNA AcHobo -516 177 52 673 148 0 0 chr2 28948030 28948131 -221739723 + FRAM SINE Alu 55 155 -21 1819 142 3 71 chr2 28948205 28948529 -221739325 + AluJb SINE Alu 1 302 -10 356 257 270 0 chr2 28948606 28948754 -221739100 + MIR SINE MIR 73 260 -2 346 319 75 27 chr2 28949207 28949395 -221738459 - MIR SINE MIR -1 261 65 557 282 97 5 chr2 28951059 28951254 -221736600 + MIR SINE MIR 46 258 -4 220 258 16 0 chr2 28951337 28951399 -221736455 + MIR SINE MIR 188 250 -12 504 136 123 0 chr2 28952036 28952117 -221735737 + 5S rRNA rRNA 1 91 -30 2563 137 54 5 chr2 28953623 28954031 -221733823 + MSTA LTR MaLR 1 428 0 271 295 0 0 chr2 28954212 28954273 -221733581 + L2 LINE L2 2424 2484 -830 260 301 66 71 chr2 28954385 28954524 -221733330 + L2 LINE L2 3075 3214 -58 2119 101 7 0 chr2 28954524 28954821 -221733033 - AluSx SINE Alu -13 299 1 260 301 66 71 chr2 28954821 28954877 -221732977 + L2 LINE L2 3214 3269 -3 633 277 11 113 chr2 28955215 28955489 -221732365 - MIR SINE MIR -5 257 12 247 226 202 45 chr2 28955712 28955865 -221731989 + MIR3 SINE MIR 20 204 -4 1916 156 0 7 chr2 28956234 28956541 -221731313 + AluSx SINE Alu 1 305 -7 268 225 50 38 chr2 28956707 28956787 -221731067 + MIR SINE MIR 123 203 -59 1956 131 60 35 chr2 28956856 28957222 -221730632 - THE1C LTR MaLR 0 375 1 1050 171 11 11 chr2 28957527 28957703 -221730151 - MER58A DNA MER1_type -3 221 46 1610 201 3 0 chr2 28957703 28958007 -221729847 + AluJo SINE Alu 1 305 -7 976 152 6 12 chr2 28958008 28958179 -221729675 + AluJo/FRAM SINE Alu 132 301 -11 2153 106 0 10 chr2 28958263 28958566 -221729288 - AluSx SINE Alu -12 300 1 2262 101 3 0 chr2 28958577 28958884 -221728970 - AluSx SINE Alu -4 308 1 317 160 0 0 chr2 28959029 28959079 -221728775 + Tigger5 DNA MER2_type 1 50 -2273 465 239 0 0 chr2 28959120 28959208 -221728646 - Tigger5 DNA MER2_type -2235 88 1 498 207 0 0 chr2 28959219 28959306 -221728548 + Tigger5 DNA MER2_type 2237 2323 0 420 212 119 42 chr2 28959313 28959324 -221728530 - MIR SINE MIR -89 173 164 2106 120 10 0 chr2 28959324 28959632 -221728222 - AluSx SINE Alu -1 311 1 420 212 119 42 chr2 28959632 28959738 -221728116 - MIR SINE MIR -98 164 47 234 62 0 0 chr2 28960380 28960412 -221727442 + (CA)n Simple_repeat Simple_repeat 2 33 0 1202 284 88 10 chr2 28961226 28961705 -221726149 - LTR33A LTR ERVL -6 517 2 551 344 99 32 chr2 28961989 28962364 -221725490 - L2 LINE L2 -49 3223 2824 1836 203 46 3 chr2 28962441 28962791 -221725063 - MLT1A1 LTR MaLR 0 365 1 1772 101 12 0 chr2 28962832 28963114 -221724740 + AluSx SINE Alu 32 316 0 264 277 0 0 chr2 28963281 28963364 -221724490 + GA-rich Low_complexity Low_complexity 2 84 0 1458 168 50 26 chr2 28963921 28964224 -221723630 + AluJo SINE Alu 1 310 -2 923 148 12 6 chr2 28964698 28964860 -221722994 + FRAM SINE Alu 1 162 -14 3791 139 17 16 chr2 28965042 28965673 -221722181 + L1MB3 LINE L1 5552 6183 0 268 235 0 122 chr2 28965997 28966058 -221721796 + MIR SINE MIR 65 111 -151 885 149 0 8 chr2 28966058 28966192 -221721662 - FLAM_C SINE Alu 0 133 1 268 235 0 122 chr2 28966192 28966228 -221721626 + MIR SINE MIR 111 150 -112 413 81 16 0 chr2 28966266 28966328 -221721526 + (TCC)n Simple_repeat Simple_repeat 1 63 0 790 237 48 5 chr2 28966328 28966514 -221721340 - AluJo SINE Alu -1 311 118 223 419 22 7 chr2 28966597 28966733 -221721121 - MIR3 SINE MIR -62 146 9 546 255 103 0 chr2 28966801 28966946 -221720908 + MIR SINE MIR 20 179 -83 1823 164 3 19 chr2 28967029 28967388 -221720466 + AluJo SINE Alu 1 354 0 1995 123 7 10 chr2 28967391 28967699 -221720155 + AluSx SINE Alu 1 307 -5 1931 114 0 0 chr2 28968596 28968859 -221718995 + AluSx SINE Alu 20 282 -30 234 0 0 0 chr2 28968861 28968887 -221718967 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 616 288 61 10 chr2 28969025 28969223 -221718631 + MIR SINE MIR 49 256 -6 2484 58 0 0 chr2 28969365 28969673 -221718181 + AluY SINE Alu 1 308 -3 1958 139 0 13 chr2 28969918 28970221 -221717633 + AluJb SINE Alu 1 299 -13 233 367 25 25 chr2 28970807 28970927 -221716927 + L2 LINE L2 3183 3302 -11 1187 224 94 63 chr2 28971124 28971199 -221716655 - MLT1D LTR MaLR 0 505 434 1930 114 47 0 chr2 28971199 28971496 -221716358 + AluSx SINE Alu 1 311 -1 1187 224 94 63 chr2 28971496 28971910 -221715944 - MLT1D LTR MaLR -71 434 1 1767 160 3 0 chr2 28971938 28972231 -221715623 + AluSx SINE Alu 1 294 -18 473 289 200 6 chr2 28972622 28972802 -221715052 - MIR SINE MIR -40 222 8 467 266 55 16 chr2 28973367 28973495 -221714359 - MIR3 SINE MIR -53 155 23 300 335 30 68 chr2 28973656 28973892 -221713962 + L2 LINE L2 2967 3193 -79 1713 176 113 93 chr2 28974332 28974459 -221713395 + MLT1D LTR MaLR 1 124 -381 1584 119 0 58 chr2 28974459 28974720 -221713134 + AluJb SINE Alu 43 288 -24 1713 176 113 93 chr2 28974720 28974827 -221713027 + MLT1D LTR MaLR 124 227 -278 222 37 0 0 chr2 28974827 28974854 -221713000 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 540 0 0 0 chr2 28974853 28974913 -221712941 + (GA)n Simple_repeat Simple_repeat 2 61 0 1713 176 113 93 chr2 28974854 28975172 -221712682 + MLT1D LTR MaLR 227 505 0 638 239 105 47 chr2 28975299 28975521 -221712333 - MIR SINE MIR -2 260 7 475 242 32 24 chr2 28975600 28975724 -221712130 - MIR SINE MIR -16 246 122 1438 173 83 0 chr2 28976582 28976860 -221710994 + AluJb SINE Alu 1 301 -11 449 252 154 14 chr2 28976860 28977003 -221710851 + MIR3 SINE MIR 27 189 -19 1940 104 0 85 chr2 28977760 28978088 -221709766 - AluSx SINE Alu -12 300 1 620 254 149 31 chr2 28978466 28978694 -221709160 - MIR SINE MIR 0 262 8 270 302 47 47 chr2 28978689 28978818 -221709036 + L2 LINE L2 3138 3266 -6 * 449 147 368 0 chr2 28979438 28979533 -221708321 - FLAM_C SINE Alu -3 130 1 482 43 159 0 chr2 28979611 28979680 -221708174 - MADE1 DNA Mariner 0 80 1 2001 79 0 0 chr2 28979995 28980260 -221707594 + AluY SINE Alu 41 305 -6 536 292 52 26 chr2 28980481 28980651 -221707203 - MIR SINE MIR -48 214 50 2008 111 0 7 chr2 28980651 28980966 -221706888 + AluSx SINE Alu 5 317 0 536 292 52 26 chr2 28980966 28980979 -221706875 - MIR SINE MIR -212 50 39 356 73 36 0 chr2 28980979 28981034 -221706820 + L1MA6 LINE L1 6244 6300 0 246 192 0 39 chr2 28981073 28981125 -221706729 - MIR SINE MIR -208 54 5 21 0 0 0 chr2 28981201 28981222 -221706632 + AT_rich Low_complexity Low_complexity 1 21 0 2172 106 0 10 chr2 28981375 28981678 -221706176 + AluSq SINE Alu 1 300 -13 731 157 0 0 chr2 28981981 28982102 -221705752 - FLAM_C SINE Alu 0 143 23 526 332 44 22 chr2 28982256 28982530 -221705324 + L1MEc LINE L1 2120 2399 -3997 1395 182 91 0 chr2 28982536 28982800 -221705054 + AluJo SINE Alu 1 288 -24 24 0 0 0 chr2 28982801 28982825 -221705029 + AT_rich Low_complexity Low_complexity 1 24 0 820 181 22 22 chr2 28982825 28983007 -221704847 + FRAM SINE Alu 1 176 0 318 300 25 33 chr2 28983007 28983127 -221704727 + L1MEc LINE L1 2363 2481 -3734 2170 79 3 0 chr2 28983138 28983429 -221704425 + AluY SINE Alu 1 292 -19 341 260 80 20 chr2 28983582 28983682 -221704172 - L2 LINE L2 -12 3301 3196 2093 104 3 7 chr2 28983733 28984031 -221703823 - AluSc SINE Alu -12 297 1 419 280 10 10 chr2 28985505 28985605 -221702249 - L2 LINE L2 -14 3299 3200 359 311 44 27 chr2 28985611 28985794 -221702060 - L2 LINE L2 -252 3061 2876 1780 122 70 0 chr2 28985862 28986132 -221701722 + AluSx SINE Alu 1 289 -23 207 0 0 0 chr2 28986132 28986155 -221701699 + (GA)n Simple_repeat Simple_repeat 2 24 0 2466 47 0 0 chr2 28986293 28986589 -221701265 - AluY SINE Alu -15 296 1 1874 136 0 23 chr2 28986874 28987182 -221700672 + AluSx SINE Alu 1 301 -11 1846 159 3 3 chr2 28987488 28987796 -221700058 - AluSx SINE Alu -4 308 1 209 328 16 0 chr2 28987871 28987935 -221699919 + L3 LINE CR1 1297 1361 -216 1920 129 20 0 chr2 28987966 28988260 -221699594 + AluSq SINE Alu 1 300 -13 193 125 31 0 chr2 28988352 28988384 -221699470 + MIR3 SINE MIR 165 197 -11 1320 164 4 13 chr2 28988465 28988697 -221699157 + L1M4 LINE L1 5374 5603 -581 1877 124 0 0 chr2 28988701 28988974 -221698880 + AluSg SINE Alu 29 301 -9 1998 218 107 43 chr2 28989125 28989216 -221698638 + Zaphod DNA AcHobo 2 86 -3945 2152 123 7 0 chr2 28989216 28989526 -221698328 + AluSx SINE Alu 1 312 0 1998 218 107 43 chr2 28989526 28989993 -221697861 + Zaphod DNA AcHobo 86 596 -3435 1221 152 5 0 chr2 28990006 28990203 -221697651 - AluJb SINE Alu -31 281 84 689 107 54 0 chr2 28990203 28990315 -221697539 + FLAM_C SINE Alu 14 131 -12 573 149 95 68 chr2 28990316 28990537 -221697317 + Zaphod DNA AcHobo 764 990 -3041 * 710 204 102 34 chr2 28990536 28990786 -221697068 + Zaphod DNA AcHobo 3596 3875 -156 1934 96 14 7 chr2 28990786 28991090 -221696764 + AluSq SINE Alu 1 306 0 710 204 102 34 chr2 28991090 28991161 -221696693 + Zaphod DNA AcHobo 3875 3940 -91 1732 108 81 0 chr2 28991163 28991422 -221696432 + AluSx SINE Alu 1 280 -32 2172 92 20 0 chr2 28991444 28991747 -221696107 + AluY SINE Alu 1 309 -2 483 325 13 0 chr2 28991780 28991931 -221695923 - MER91A DNA MER1_type -43 153 1 239 291 105 12 chr2 28993467 28993553 -221694301 - L2 LINE L2 -21 3251 3158 1656 150 65 0 chr2 28993778 28994071 -221693783 - AluSx SINE Alu 0 312 1 1886 108 7 43 chr2 28994758 28995063 -221692791 + AluSx SINE Alu 1 294 -18 853 215 23 41 chr2 28995956 28996071 -221691783 + MER58C DNA MER1_type 1 117 -2303 1807 153 7 0 chr2 28996071 28996397 -221691457 + AluSx SINE Alu 1 328 0 1883 129 3 3 chr2 28996400 28996724 -221691130 + AluSx SINE Alu 1 324 0 853 215 23 41 chr2 28996724 28996821 -221691033 + MER58C DNA MER1_type 119 215 0 324 120 0 0 chr2 28997651 28997701 -221690153 + (TG)n Simple_repeat Simple_repeat 1 50 0 347 155 0 14 chr2 28998136 28998207 -221689647 + CT-rich Low_complexity Low_complexity 4 73 0 892 291 70 49 chr2 28998213 28998659 -221689195 - L2 LINE L2 -14 3299 2845 1602 151 51 14 chr2 28998694 28998986 -221688868 + AluJo SINE Alu 3 305 -7 1626 164 7 0 chr2 28999246 28999532 -221688322 - AluSx SINE Alu 0 312 25 2298 128 53 14 chr2 28999692 29000129 -221687725 + Tigger3b DNA MER2_type 325 778 -453 1290 161 141 16 chr2 29000123 29000378 -221687476 + Tigger3b DNA MER2_type 945 1231 0 * 1893 113 46 14 chr2 29000672 29000956 -221686898 - AluSg SINE Alu -17 293 1 5270 192 70 34 chr2 29001619 29001768 -221686086 - Charlie1a DNA MER1_type -1306 1455 1313 2031 127 7 10 chr2 29001768 29002067 -221685787 + AluSx SINE Alu 1 298 -14 5270 192 70 34 chr2 29002067 29003260 -221684594 - Charlie1a DNA MER1_type -1448 1313 64 2156 100 10 3 chr2 29003477 29003767 -221684087 - AluSg SINE Alu -18 292 1 260 287 11 11 chr2 29003865 29003945 -221683909 + GA-rich Low_complexity Low_complexity 2 84 -4 2278 108 0 0 chr2 29003945 29004241 -221683613 + AluY SINE Alu 1 296 -15 1467 155 36 8 chr2 29004445 29004697 -221683157 + AluSx SINE Alu 36 294 -18 8903 178 97 50 chr2 29004900 29005358 -221682496 - Cheshire DNA MER1_type -202 2218 1783 1696 169 37 7 chr2 29005358 29005654 -221682200 + AluJo SINE Alu 1 305 -7 8903 178 97 50 chr2 29005654 29006524 -221681330 - Cheshire DNA MER1_type -637 1783 956 2434 68 3 0 chr2 29006524 29006818 -221681036 + AluY SINE Alu 1 295 -16 8903 178 97 50 chr2 29006818 29007600 -221680254 - Cheshire DNA MER1_type -1464 956 7 211 161 286 0 chr2 29007659 29007715 -221680139 + MIR SINE MIR 32 103 -105 324 311 62 62 chr2 29007852 29008273 -221679581 + L1ME LINE L1 492 991 -5539 969 266 125 17 chr2 29008513 29008960 -221678894 + L1ME LINE L1 1404 1801 -4920 1604 103 5 5 chr2 29008960 29009184 -221678670 - AluSp SINE Alu -15 298 75 969 266 125 17 chr2 29009184 29009466 -221678388 + L1ME LINE L1 1801 2280 -4441 759 228 50 8 chr2 29009469 29009709 -221678145 + L1ME LINE L1 2354 2563 -3977 1847 126 38 0 chr2 29009709 29009972 -221677882 + AluSq SINE Alu 1 273 -40 2438 86 0 9 chr2 29010561 29010876 -221676978 + AluSq SINE Alu 1 312 -1 1757 185 17 0 chr2 29011112 29011409 -221676445 - AluJo SINE Alu -7 305 4 1473 154 0 0 chr2 29011419 29011639 -221676215 - AluJb SINE Alu -7 305 86 2353 98 3 0 chr2 29011665 29011970 -221675884 - AluSc SINE Alu -3 306 1 315 317 41 8 chr2 29011971 29012094 -221675760 + MER5A DNA MER1_type 63 189 0 * 780 237 20 41 chr2 29012094 29012289 -221675565 + MIR SINE MIR 71 260 -2 2188 105 14 0 chr2 29012312 29012607 -221675247 - AluSx SINE Alu -13 299 1 307 234 26 0 chr2 29012671 29012748 -221675106 - MER110 LTR ERV1 -42 449 371 1576 176 59 7 chr2 29012878 29013150 -221674704 + AluJo SINE Alu 12 297 -15 2206 128 0 7 chr2 29013373 29013679 -221674175 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr2 29013679 29013702 -221674152 + AT_rich Low_complexity Low_complexity 1 23 0 1410 131 0 0 chr2 29014120 29014311 -221673543 - AluSx SINE Alu -121 191 1 263 342 18 0 chr2 29014919 29015033 -221672821 - L1ME3 LINE L1 -2 6160 6045 1232 194 0 0 chr2 29015039 29015255 -221672599 + AluJb SINE Alu 97 312 0 629 162 28 35 chr2 29015261 29015403 -221672451 - L1ME3 LINE L1 -112 6050 5910 439 153 0 0 chr2 29015408 29015467 -221672387 - AluJo SINE Alu -22 290 232 957 180 6 34 chr2 29015471 29015649 -221672205 - AluJo SINE Alu -139 173 1 2612 220 88 37 chr2 29015651 29016450 -221671404 - L1ME3 LINE L1 -256 5906 5017 2338 100 17 0 chr2 29016450 29016751 -221671103 + AluSq SINE Alu 1 306 -7 2612 220 88 37 chr2 29016751 29017166 -221670688 - L1ME3 LINE L1 -1145 5017 4625 2271 128 0 0 chr2 29017190 29017502 -221670352 - AluSx SINE Alu 0 312 1 553 276 76 77 chr2 29017914 29018193 -221669661 + L2 LINE L2 2722 3000 -313 213 39 0 0 chr2 29018193 29018219 -221669635 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1968 122 7 0 chr2 29018221 29018500 -221669354 - AluSx SINE Alu -31 281 1 553 276 76 77 chr2 29018500 29018620 -221669234 + L2 LINE L2 3001 3139 -174 414 0 0 0 chr2 29018621 29018667 -221669187 + (CA)n Simple_repeat Simple_repeat 2 47 0 357 250 120 0 chr2 29018690 29018782 -221669072 + MER81 DNA DNA 8 110 -4 611 229 38 8 chr2 29018782 29018913 -221668941 + L2 LINE L2 3179 3313 0 3232 141 20 6 chr2 29019364 29019902 -221667952 + L1MA4 LINE L1 5747 6292 -8 5515 165 14 3 chr2 29020086 29021032 -221666822 - L1PA14 LINE L1 -1432 4714 3759 6525 79 26 21 chr2 29021032 29021122 -221666732 + L1PA14 LINE L1 4728 4816 -1345 2035 88 3 61 chr2 29021122 29021462 -221666392 + AluSg SINE Alu 1 323 0 6525 79 26 21 chr2 29021462 29022468 -221665386 + L1PA14 LINE L1 4816 5821 -340 2062 147 0 6 chr2 29022468 29022781 -221665073 + AluSx SINE Alu 1 311 -1 6525 79 26 21 chr2 29022781 29023115 -221664739 + L1PA14 LINE L1 5821 6152 -9 261 277 133 43 chr2 29023426 29023614 -221664240 + MIR SINE MIR 31 235 -27 200 371 72 21 chr2 29024080 29024130 -221663724 + MIR SINE MIR 44 90 -118 1645 187 7 7 chr2 29024130 29024429 -221663425 - AluJo SINE Alu -13 299 1 200 371 72 21 chr2 29024429 29024475 -221663379 + MIR SINE MIR 90 145 -63 346 317 50 8 chr2 29025092 29025212 -221662642 - MIR3 SINE MIR -3 205 81 26 30 0 0 chr2 29025489 29025522 -221662332 + AT_rich Low_complexity Low_complexity 1 33 0 1855 136 42 3 chr2 29025752 29026039 -221661815 + AluJo SINE Alu 1 298 -14 26 0 0 0 chr2 29027307 29027333 -221660521 + AT_rich Low_complexity Low_complexity 1 26 0 243 238 143 0 chr2 29027525 29027609 -221660245 + L1ME4a LINE L1 6009 6104 -17 248 306 31 0 chr2 29027640 29027738 -221660116 + MER46C DNA MER2_type 194 294 -44 787 228 114 17 chr2 29028875 29029112 -221658742 + MIR SINE MIR 3 262 0 2315 67 3 19 chr2 29032059 29032371 -221655483 - AluSg1 SINE Alu -1 308 2 28 95 0 0 chr2 29032371 29032455 -221655399 + AT_rich Low_complexity Low_complexity 1 84 0 203 191 0 24 chr2 29032780 29032822 -221655032 - L2 LINE L2 -81 3191 3151 1874 114 40 10 chr2 29033377 29033674 -221654180 - AluSq SINE Alu -7 306 1 364 261 98 25 chr2 29034284 29034487 -221653367 - L1ME4a LINE L1 -81 6040 5823 1497 168 0 15 chr2 29034860 29035122 -221652732 - AluJo SINE Alu -54 258 1 2959 136 67 40 chr2 29035215 29035796 -221652058 - L1MB8 LINE L1 -9 6169 5573 1055 147 80 59 chr2 29036361 29036599 -221651255 - AluJo SINE Alu 0 312 70 754 220 56 60 chr2 29037379 29037568 -221650286 + Tigger3(Golem) DNA MER2_type 17 206 -1025 674 291 17 30 chr2 29037568 29037870 -221649984 + AluSx SINE Alu 1 298 -4 754 220 56 60 chr2 29037870 29037912 -221649942 + Tigger3(Golem) DNA MER2_type 206 247 -984 1946 112 0 0 chr2 29038078 29038338 -221649516 - AluSq SINE Alu -53 260 1 1706 163 7 17 chr2 29038721 29039021 -221648833 - AluJb SINE Alu -15 297 1 1195 179 153 48 chr2 29039021 29039289 -221648565 - AluJo SINE Alu -6 296 1 2324 93 10 0 chr2 29039862 29040172 -221647682 - AluSp SINE Alu 0 313 1 309 195 155 63 chr2 29040742 29040916 -221646938 + L1M4 LINE L1 5194 5383 -763 209 222 0 74 chr2 29041199 29041253 -221646601 + L2 LINE L2 3209 3258 -14 2143 141 0 3 chr2 29041253 29041566 -221646288 - AluSp SINE Alu -1 312 1 1658 229 113 22 chr2 29041869 29042328 -221645526 - MLT1F1 LTR MaLR 0 567 67 330 313 21 10 chr2 29043433 29043529 -221644325 - L2 LINE L2 -24 3289 3193 2298 102 0 6 chr2 29043678 29043993 -221643861 - AluSp SINE Alu 0 313 1 1335 161 68 14 chr2 29044816 29045108 -221642746 - L1MA8 LINE L1 -2 6289 5982 22 35 0 0 chr2 29045591 29045620 -221642234 + AT_rich Low_complexity Low_complexity 1 29 0 2324 92 0 3 chr2 29047077 29047372 -221640482 + AluSg SINE Alu 1 294 -16 571 165 41 21 chr2 29048055 29048152 -221639702 - FLAM_A SINE Alu -32 110 12 777 153 0 36 chr2 29048236 29048373 -221639481 + AluJo/FLAM SINE Alu 1 132 -170 285 229 0 16 chr2 29048373 29048434 -221639420 + AluSg/x SINE Alu 132 191 -109 * 1348 219 59 0 chr2 29048412 29048682 -221639172 + MLT1A1 LTR MaLR 55 340 -25 1246 274 84 44 chr2 29048905 29049355 -221638499 - L1M4 LINE L1 -1082 5133 4650 2283 95 10 0 chr2 29049355 29049651 -221638203 + AluSq SINE Alu 1 299 -14 1246 274 84 44 chr2 29049651 29049816 -221638038 - L1M4 LINE L1 -1565 4650 4493 1311 248 64 59 chr2 29049837 29050434 -221637420 - L1MEc LINE L1 -3372 2843 2272 2204 105 21 0 chr2 29050434 29050720 -221637134 - AluSx SINE Alu -20 292 1 1311 248 64 59 chr2 29050720 29050908 -221636946 - L1MEc LINE L1 -3943 2272 2086 1819 59 40 0 chr2 29051170 29051392 -221636462 + AluY SINE Alu 73 303 -8 2444 59 0 0 chr2 29051770 29052058 -221635796 + AluY SINE Alu 1 288 -23 340 271 54 36 chr2 29052779 29052945 -221634909 + MER104 DNA Tc2 6 174 -6 956 261 193 27 chr2 29053592 29053905 -221633949 - L1ME3A LINE L1 -14 6156 5896 1326 149 40 4 chr2 29053905 29054133 -221633721 + MER46A DNA MER2_type 1 236 0 956 261 193 27 chr2 29054133 29054477 -221633377 - L1ME3A LINE L1 -274 5896 5390 1934 125 57 0 chr2 29054478 29054758 -221633096 - AluSx SINE Alu -16 296 1 646 227 50 12 chr2 29054758 29054999 -221632855 - L1MEc LINE L1 -3977 2268 2029 228 209 30 15 chr2 29055002 29055069 -221632785 - L1MEc LINE L1 -4441 1955 1888 1999 151 0 22 chr2 29055505 29055816 -221632038 - AluJo SINE Alu -8 304 1 285 292 97 19 chr2 29055899 29056053 -221631801 - MIR SINE MIR -83 179 14 181 356 22 22 chr2 29156699 29156789 -221531065 - L2 LINE L2 -1036 2278 2189 206 318 55 9 chr2 29157101 29157211 -221530643 + L2 LINE L2 1595 1709 -1605 219 309 82 45 chr2 29157249 29157469 -221530385 + L2 LINE L2 1698 1925 -1389 2018 135 0 3 chr2 29157650 29157953 -221529901 - AluSx SINE Alu -10 302 1 1717 116 43 53 chr2 29158006 29158307 -221529547 - AluJb SINE Alu -14 298 1 672 117 97 0 chr2 29158307 29158410 -221529444 - AluSq/x SINE Alu -177 135 23 328 295 0 0 chr2 29158413 29158491 -221529363 - MIR SINE MIR -114 148 71 207 329 41 0 chr2 29159390 29159463 -221528391 - MIR3 SINE MIR 0 208 133 479 30 0 15 chr2 29159575 29159641 -221528213 + (TG)n Simple_repeat Simple_repeat 1 65 0 461 242 139 33 chr2 29159672 29159887 -221527967 - MIR SINE MIR -4 258 21 2210 112 0 28 chr2 29161378 29161699 -221526155 + AluSx SINE Alu 1 312 0 210 316 53 11 chr2 29161715 29161810 -221526044 + MER5A DNA MER1_type 86 184 -5 186 39 0 118 chr2 29162282 29162333 -221525521 + (GGCTG)n Simple_repeat Simple_repeat 5 49 0 191 139 83 0 chr2 29163924 29163960 -221523894 + MIR SINE MIR 115 153 -55 421 224 122 0 chr2 29164287 29164394 -221523460 - MIR SINE MIR -56 152 33 4126 116 24 41 chr2 29164702 29165139 -221522715 - L1MA4 LINE L1 0 6300 5878 1839 100 90 10 chr2 29165139 29165429 -221522425 + AluSq SINE Alu 1 313 0 4126 116 24 41 chr2 29165429 29165671 -221522183 - L1MA4 LINE L1 -422 5878 5633 1015 171 104 0 chr2 29165671 29165911 -221521943 + L1 LINE L1 5101 5365 -781 251 273 157 36 chr2 29168241 29168490 -221519364 + L2 LINE L2 2600 2878 -436 396 270 169 49 chr2 29168593 29168860 -221518994 + L2 LINE L2 3014 3312 -1 537 308 66 0 chr2 29168919 29169117 -221518737 + MIR SINE MIR 52 262 0 1044 142 41 0 chr2 29169928 29170097 -221517757 - AluSg/x SINE Alu -3 307 132 2066 89 27 7 chr2 29170097 29170389 -221517465 - AluSx SINE Alu -14 298 1 264 298 48 0 chr2 29170740 29170824 -221517030 - MIR3 SINE MIR -40 168 81 686 237 54 0 chr2 29171683 29171869 -221515985 + MIR3 SINE MIR 6 201 -7 472 100 0 0 chr2 29172604 29172664 -221515190 - Alu SINE Alu -26 285 226 961 275 58 3 chr2 29172812 29173121 -221514733 + HsTC2 DNA Tc2 215 540 -1358 255 210 0 62 chr2 29173127 29173208 -221514646 + HsTC2 DNA Tc2 1822 1897 -1 433 345 125 12 chr2 29173232 29173741 -221514113 + L2 LINE L2 2487 3058 -214 621 245 173 3 chr2 29173817 29174140 -221513714 + L1ME4a LINE L1 5741 6118 -3 364 327 133 20 chr2 29175614 29175862 -221511992 + L2 LINE L2 2997 3272 0 244 296 157 26 chr2 29176051 29176166 -221511688 + L3 LINE CR1 1435 1564 -13 2070 133 0 3 chr2 29176181 29176483 -221511371 + AluSg SINE Alu 1 301 -9 519 276 65 61 chr2 29177417 29177663 -221510191 + MIR SINE MIR 10 256 -6 197 258 32 0 chr2 29178276 29178338 -221509516 - MIR3 SINE MIR -24 184 121 1554 133 115 18 chr2 29179778 29180056 -221507798 - AluSg SINE Alu -5 305 1 218 271 71 0 chr2 29180191 29180261 -221507593 + L3b LINE CR1 1285 1359 -224 288 212 68 68 chr2 29181637 29181769 -221506085 - L1ME4a LINE L1 -44 6077 5946 2238 149 48 86 chr2 29181775 29182250 -221505604 + LTR32 LTR ERVL 15 471 0 2242 94 3 0 chr2 29182337 29182635 -221505219 - AluSx SINE Alu -13 299 1 391 302 71 0 chr2 29183207 29183333 -221504521 - MIR SINE MIR 0 262 128 1118 175 0 0 chr2 29183436 29183607 -221504247 + FAM SINE Alu 2 172 -3 399 277 0 10 chr2 29183644 29183745 -221504109 - HsTC2 DNA Tc2 -1798 100 1 1824 169 0 7 chr2 29184470 29184777 -221503077 - AluJb SINE Alu -7 305 1 4543 104 38 26 chr2 29184810 29184998 -221502856 - L1PB1 LINE L1 -1 6150 5966 2458 54 0 0 chr2 29184998 29185294 -221502560 - AluY SINE Alu -15 296 1 4543 104 38 26 chr2 29185294 29185470 -221502384 - L1PB1 LINE L1 -185 5966 5794 324 0 0 0 chr2 29185470 29185506 -221502348 + (TG)n Simple_repeat Simple_repeat 2 37 0 186 43 0 0 chr2 29185506 29185529 -221502325 + (CATA)n Simple_repeat Simple_repeat 2 24 0 4543 104 38 26 chr2 29185529 29185856 -221501998 - L1PB1 LINE L1 -356 5795 5449 336 303 158 30 chr2 29185858 29186155 -221501699 + L2 LINE L2 2376 2710 -604 257 300 20 47 chr2 29186156 29186306 -221501548 + L1MC/D LINE L1 5370 5515 -2270 349 264 106 65 chr2 29186679 29187055 -221500799 + L2 LINE L2 2696 3079 -234 1184 154 41 9 chr2 29187068 29187288 -221500566 - AluJo SINE Alu -85 227 1 337 269 54 15 chr2 29187291 29187421 -221500433 + L2 LINE L2 3117 3251 -62 291 272 11 22 chr2 29188419 29188511 -221499343 + L2 LINE L2 3176 3266 -47 219 271 29 14 chr2 29188861 29188931 -221498923 + L2 LINE L2 3197 3267 -5 181 175 25 0 chr2 29189175 29189215 -221498639 - MER5A DNA MER1_type -114 75 35 307 219 85 0 chr2 29189278 29189360 -221498494 - MIR SINE MIR -66 196 108 650 188 8 16 chr2 29189441 29189569 -221498285 - MIR SINE MIR -37 225 99 236 245 0 53 chr2 29190279 29190373 -221497481 + CT-rich Low_complexity Low_complexity 2 90 0 234 293 13 0 chr2 29192245 29192320 -221495534 + (CA)n Simple_repeat Simple_repeat 1 76 0 329 321 43 33 chr2 29193245 29193429 -221494425 - MIR3 SINE MIR -6 202 17 2235 115 0 0 chr2 29193557 29193869 -221493985 + AluSx SINE Alu 1 312 0 2078 175 142 16 chr2 29194380 29194866 -221492988 + LTR10B LTR ERV1 1 547 0 198 261 62 0 chr2 29195236 29195301 -221492553 + MIR SINE MIR 83 151 -57 1995 108 41 3 chr2 29195301 29195596 -221492258 + AluSx SINE Alu 1 306 -6 530 263 94 19 chr2 29195649 29195915 -221491939 + MER113 DNA MER1_type? 30 315 -206 658 104 85 9 chr2 29195916 29196022 -221491832 + MSTA LTR MaLR 264 377 -51 358 227 85 14 chr2 29195979 29196120 -221491734 + MER113 DNA MER1_type? 261 411 -110 * 1527 210 0 13 chr2 29197061 29197375 -221490479 + AluJo SINE Alu 1 310 -2 739 276 166 14 chr2 29197671 29198191 -221489663 - L2 LINE L2 -3 3310 2709 371 208 40 64 chr2 29198228 29198353 -221489501 - L1MD3 LINE L1 -10 7985 7864 2026 279 73 18 chr2 29198353 29199202 -221488652 - L2 LINE L2 -599 2715 1820 220 323 0 0 chr2 29199230 29199292 -221488562 - L2 LINE L2 -1606 1708 1647 533 294 26 0 chr2 29199304 29199498 -221488356 - L2 LINE L2 -2363 951 753 218 213 80 40 chr2 29200804 29200879 -221486975 - MIR3 SINE MIR -17 191 114 2324 165 40 89 chr2 29200879 29201462 -221486392 + MLT2B3 LTR ERVL 1 554 0 226 308 77 0 chr2 29203120 29203211 -221484643 + MIR3 SINE MIR 108 205 -3 584 238 24 8 chr2 29203944 29204070 -221483784 - L2 LINE L2 0 3313 3186 252 0 0 0 chr2 29204716 29204744 -221483110 + (CA)n Simple_repeat Simple_repeat 2 29 0 214 286 0 0 chr2 29205723 29205772 -221482082 + L2 LINE L2 3264 3312 -1 2124 132 0 0 chr2 29206016 29206305 -221481549 + AluSx SINE Alu 1 289 -23 2194 145 0 0 chr2 29206322 29206677 -221481177 + AluSx SINE Alu 1 355 0 770 193 12 0 chr2 29208263 29208591 -221479263 + (CA)n Simple_repeat Simple_repeat 1 332 0 486 173 13 36 chr2 29208637 29208887 -221478967 + (CA)n Simple_repeat Simple_repeat 1 244 0 439 247 6 6 chr2 29208908 29209078 -221478776 + (CA)n Simple_repeat Simple_repeat 2 171 0 439 195 16 43 chr2 29209120 29209305 -221478549 + (CA)n Simple_repeat Simple_repeat 1 180 0 200 250 12 0 chr2 29209323 29209403 -221478451 + (CA)n Simple_repeat Simple_repeat 1 81 0 762 216 11 1 chr2 29209421 29210215 -221477639 + (CA)n Simple_repeat Simple_repeat 1 801 0 912 94 8 8 chr2 29210492 29210619 -221477235 + AluSq/x SINE Alu 1 127 -186 317 235 59 0 chr2 29210730 29210798 -221477056 - MIR SINE MIR -190 72 1 2066 150 192 23 chr2 29211131 29211651 -221476203 - LTR18B LTR ERVL -6 608 1 305 183 215 0 chr2 29213126 29213219 -221474635 + MER81 DNA DNA 1 113 -1 300 164 78 0 chr2 29213551 29213679 -221474175 + (TCTA)n Simple_repeat Simple_repeat 1 138 0 1227 151 78 0 chr2 29214306 29214525 -221473329 + MER46A DNA MER2_type 1 236 0 343 257 64 46 chr2 29214549 29214658 -221473196 - MER91A DNA MER1_type 0 196 86 241 290 215 0 chr2 29214666 29214759 -221473095 - MER91A DNA MER1_type -35 161 49 185 167 71 0 chr2 29214970 29215012 -221472842 + MIR SINE MIR 66 110 -152 267 284 154 24 chr2 29215272 29215441 -221472413 - MIR SINE MIR -70 192 2 2214 109 75 31 chr2 29216640 29216989 -221470865 - THE1B LTR MaLR 0 364 1 2380 155 70 11 chr2 29217003 29217324 -221470530 - L1MB3 LINE L1 -7 6176 5817 1974 163 0 13 chr2 29217324 29217500 -221470354 - AluSx SINE Alu -3 309 137 2229 91 0 53 chr2 29217500 29217819 -221470035 - AluSg SINE Alu -8 302 1 1974 163 0 13 chr2 29217819 29217955 -221469899 - AluSx SINE Alu -175 137 1 2380 155 70 11 chr2 29217955 29218105 -221469749 - L1MB3 LINE L1 -366 5817 5677 1850 156 7 20 chr2 29218736 29219038 -221468816 + AluJb SINE Alu 11 308 -4 349 288 110 18 chr2 29219906 29220069 -221467785 - MIR SINE MIR -49 213 36 618 258 138 5 chr2 29220095 29220312 -221467542 + ORSL DNA AcHobo 9 254 -21 3196 129 46 55 chr2 29223009 29223508 -221464346 - LTR36 LTR ERV1 0 611 109 198 118 0 0 chr2 29223508 29223542 -221464312 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3798 21 5 0 chr2 29223542 29223976 -221463878 - L1PA5 LINE L1 -16 6138 5703 3196 129 46 55 chr2 29223976 29224089 -221463765 - LTR36 LTR ERV1 -500 111 4 5225 77 3 1 chr2 29224203 29224862 -221462992 + PABL_A LTR ERV1 1 660 0 588 277 6 40 chr2 29224921 29225098 -221462756 - MER5B DNA MER1_type -5 173 3 249 337 98 21 chr2 29225197 29225390 -221462464 + MIR SINE MIR 16 223 -39 232 288 29 100 chr2 29225772 29225942 -221461912 - MIR SINE MIR -79 183 26 * 481 211 184 34 chr2 29225853 29226000 -221461854 - MER5A DNA MER1_type -12 177 9 908 162 56 15 chr2 29226295 29226493 -221461361 - MER89 LTR ERV1 0 559 354 294 274 11 20 chr2 29226504 29226593 -221461261 + MER5A DNA MER1_type 13 105 -80 232 323 172 0 chr2 29226768 29226861 -221460993 + MER5A DNA MER1_type 55 163 -26 504 0 0 0 chr2 29227550 29227606 -221460248 + (TG)n Simple_repeat Simple_repeat 1 56 0 1799 141 3 58 chr2 29227751 29228064 -221459790 + AluJo SINE Alu 1 296 -16 262 317 154 0 chr2 29228888 29228992 -221458862 - MIR SINE MIR -109 153 34 208 227 23 0 chr2 29229057 29229101 -221458753 + CT-rich Low_complexity Low_complexity 1 45 0 324 305 40 68 chr2 29233010 29233187 -221454667 + MIR SINE MIR 20 191 -71 344 289 125 82 chr2 29234435 29234530 -221453324 + MIR SINE MIR 34 123 -139 2396 97 0 3 chr2 29234530 29234838 -221453016 + AluSq SINE Alu 1 307 -6 344 289 125 82 chr2 29234838 29234950 -221452904 + MIR SINE MIR 123 250 -12 2131 137 0 10 chr2 29236211 29236511 -221451343 - AluSx SINE Alu -15 297 1 708 224 14 0 chr2 29237582 29237725 -221450129 + Charlie1 DNA MER1_type 2 146 -2615 819 256 0 9 chr2 29237847 29238062 -221449792 + AluY SINE Alu 99 311 0 372 265 85 4 chr2 29238776 29238918 -221448936 + MIR SINE MIR 16 165 -63 616 275 135 14 chr2 29239139 29239346 -221448508 - MIR SINE MIR 0 262 31 1486 192 133 3 chr2 29239467 29239790 -221448064 - MLT1A1 LTR MaLR 0 365 1 2013 125 13 35 chr2 29240896 29241207 -221446647 + AluJb SINE Alu 1 304 -8 186 269 57 78 chr2 29241258 29241399 -221446455 - L2 LINE L2 -40 3273 3136 254 236 19 123 chr2 29241413 29241476 -221446378 + MER81 DNA DNA 20 69 -45 2075 112 32 35 chr2 29241476 29241790 -221446064 + AluSq SINE Alu 1 313 0 254 236 19 123 chr2 29241790 29241832 -221446022 + MER81 DNA DNA 69 114 0 471 337 17 6 chr2 29241858 29242033 -221445821 + MIR SINE MIR 76 252 -10 26 30 0 0 chr2 29242033 29242066 -221445788 + AT_rich Low_complexity Low_complexity 1 33 0 408 208 182 0 chr2 29242171 29242330 -221445524 - MER53 DNA DNA -1 188 1 2293 95 27 0 chr2 29242567 29242861 -221444993 + AluSx SINE Alu 3 304 -8 2000 163 51 43 chr2 29243776 29244157 -221443697 + MLT2A2 LTR ERVL 1 395 -159 2129 108 22 38 chr2 29244157 29244472 -221443382 - AluSx SINE Alu 0 312 3 2000 163 51 43 chr2 29244472 29244634 -221443220 + MLT2A2 LTR ERVL 395 554 0 181 372 51 26 chr2 29244895 29244973 -221442881 + L2 LINE L2 3138 3217 -55 513 156 227 0 chr2 29245001 29245129 -221442725 + L1MC2 LINE L1 6186 6342 -2 1023 112 0 14 chr2 29245253 29245396 -221442458 + AluJb SINE Alu 1 141 -171 4756 186 51 9 chr2 29245414 29247267 -221440587 + L1MC2 LINE L1 4272 6194 -150 201 74 0 0 chr2 29248738 29248765 -221439089 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1883 85 0 4 chr2 29248794 29249029 -221438825 - AluSg/x SINE Alu -9 301 68 492 272 98 8 chr2 29249722 29249957 -221437897 - LTR33 LTR ERVL -58 463 208 2579 196 36 8 chr2 29249980 29250511 -221437343 + MER50 LTR ERV1 1 546 -188 18265 25 4 0 chr2 29250512 29253413 -221434441 - L1PA3 LINE L1 0 6155 3247 1217 124 24 52 chr2 29253413 29253451 -221434403 + MER50 LTR ERV1 531 569 -165 1907 115 50 0 chr2 29253451 29253729 -221434125 - AluY SINE Alu -19 292 1 1217 124 24 52 chr2 29253729 29253900 -221433954 + MER50 LTR ERV1 569 734 0 248 248 86 9 chr2 29253940 29254045 -221433809 - LTR33 LTR ERVL -407 114 2 2102 120 0 3 chr2 29254930 29255213 -221432641 + AluSx SINE Alu 1 282 -30 273 119 0 0 chr2 29255213 29255255 -221432599 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 882 149 43 7 chr2 29255255 29255396 -221432458 + MLT1B LTR MaLR 245 390 0 1966 135 11 0 chr2 29255562 29255844 -221432010 - AluSx SINE Alu -27 285 1 241 143 24 0 chr2 29255846 29255888 -221431966 - L2 LINE L2 -1102 2212 2170 491 256 110 26 chr2 29255943 29256134 -221431720 - L1M4 LINE L1 -519 6361 6155 765 245 66 25 chr2 29256137 29256333 -221431521 - MER63A DNA MER1_type 0 210 7 1035 282 83 52 chr2 29256356 29257514 -221430340 - L1M4 LINE L1 -739 6127 4933 348 328 82 15 chr2 29257899 29258033 -221429821 + MIR SINE MIR 7 149 -113 650 303 219 21 chr2 29258951 29259462 -221428392 + L3 LINE CR1 913 1524 -53 196 259 103 0 chr2 29259549 29259607 -221428247 - L2 LINE L2 -13 3259 3196 378 264 107 98 chr2 29260107 29260866 -221426988 - L1M4 LINE L1 -5655 1194 485 609 199 29 102 chr2 29262026 29262188 -221425666 + MER3 DNA MER1_type 1 146 -63 1906 120 43 20 chr2 29262188 29262489 -221425365 - AluSx SINE Alu -4 308 1 609 199 29 102 chr2 29262489 29262532 -221425322 + MER3 DNA MER1_type 146 191 -18 281 341 166 33 chr2 29262565 29262776 -221425078 + L2 LINE L2 3034 3272 0 2169 109 0 7 chr2 29263375 29263677 -221424177 - AluSq SINE Alu -12 301 2 23 0 0 0 chr2 29263683 29263706 -221424148 + AT_rich Low_complexity Low_complexity 1 23 0 268 304 48 32 chr2 29264763 29264888 -221422966 + L2 LINE L2 3175 3301 -12 1485 104 10 0 chr2 29267504 29267706 -221420148 + AluSg/x SINE Alu 101 304 -6 665 368 105 3 chr2 29267772 29268163 -221419691 - L3 LINE CR1 -67 1510 1080 581 255 196 41 chr2 29268163 29268625 -221419229 - L2 LINE L2 -3 3310 2778 1377 241 48 16 chr2 29268821 29269199 -221418655 - L1MEc LINE L1 -4481 1915 1526 2465 211 122 12 chr2 29269230 29270007 -221417847 - L1MEc LINE L1 -4924 1472 610 227 171 0 0 chr2 29270017 29270058 -221417796 + Charlie3 DNA MER1_type 1 41 -2669 239 114 0 0 chr2 29270065 29270100 -221417754 + Charlie3 DNA MER1_type 2678 2712 0 467 246 210 31 chr2 29270101 29270325 -221417529 - L1MEc LINE L1 -5806 590 327 258 234 56 56 chr2 29270333 29270440 -221417414 + MSR1 Satellite Satellite 4 110 -1 733 280 28 40 chr2 29270441 29270691 -221417163 - L1MEc LINE L1 -6110 286 40 2210 102 0 32 chr2 29270748 29271063 -221416791 + AluSx SINE Alu 1 305 -7 914 273 32 0 chr2 29271170 29271423 -221416431 + MIR SINE MIR 2 262 0 776 216 53 98 chr2 29271437 29271793 -221416061 - MER31-int LTR ERV1 -258 4678 4339 333 145 211 13 chr2 29271795 29271871 -221415983 - LTR37A LTR ERV1 -332 94 4 619 146 48 0 chr2 29271878 29271981 -221415873 - MER31-int LTR ERV1 -691 4245 4138 4143 179 85 106 chr2 29272030 29273537 -221414317 - MER31-int LTR ERV1 -1066 4184 2411 881 215 51 68 chr2 29274052 29274100 -221413754 - MER31-int LTR ERV1 -3211 3120 3073 576 213 62 117 chr2 29274100 29274424 -221413430 - LTR57-int LTR ERVL -4246 1097 792 881 215 51 68 chr2 29274424 29274490 -221413364 - MER31-int LTR ERV1 -3258 3073 914 398 227 0 11 chr2 29275163 29275251 -221412603 - MER95 LTR ERV -76 355 269 544 248 154 16 chr2 29275760 29275961 -221411893 + MIR SINE MIR 4 231 -31 21 89 0 0 chr2 29276038 29276094 -221411760 + AT_rich Low_complexity Low_complexity 1 56 0 379 231 126 7 chr2 29277603 29277746 -221410108 - MER5C DNA MER1_type -2 322 163 1622 215 7 0 chr2 29277761 29278063 -221409791 + AluJo SINE Alu 1 304 -8 417 225 102 75 chr2 29278203 29278390 -221409464 - L1ME LINE L1 -302 5819 5628 23 0 0 0 chr2 29279027 29279050 -221408804 + AT_rich Low_complexity Low_complexity 1 23 0 1142 198 35 0 chr2 29279826 29280028 -221407826 - MER58A DNA MER1_type -15 209 1 222 311 96 85 chr2 29281324 29281617 -221406237 - L2 LINE L2 -52 3220 2925 9970 174 41 16 chr2 29281874 29284904 -221402950 - L1PA16 LINE L1 -2 6867 3770 28 0 0 0 chr2 29284904 29284932 -221402922 + AT_rich Low_complexity Low_complexity 1 28 0 7083 35 1 0 chr2 29284932 29285759 -221402095 - L1PA3 LINE L1 0 6155 5328 3411 239 41 14 chr2 29285730 29286843 -221401011 - L1PA16 LINE L1 -3037 3812 2670 * 998 219 0 0 chr2 29286852 29287053 -221400801 - L1PA16 LINE L1 -3996 2853 2653 870 251 46 80 chr2 29288051 29288462 -221399392 + L2 LINE L2 2917 3313 0 1253 62 0 38 chr2 29289389 29289549 -221398305 - L1PA7 LINE L1 0 6154 6001 1090 153 18 0 chr2 29289657 29289827 -221398027 - FRAM SINE Alu -8 168 1 271 286 12 0 chr2 29289830 29289914 -221397940 - L1M4 LINE L1 -3705 2441 2357 329 299 104 10 chr2 29290333 29290534 -221397320 - L2 LINE L2 -1579 1735 1516 2182 111 0 0 chr2 29290542 29290839 -221397015 - AluSx SINE Alu -15 297 1 646 286 104 14 chr2 29291535 29291755 -221396099 + MIR SINE MIR 11 250 -12 261 219 80 60 chr2 29291998 29292149 -221395705 - L1MC/D LINE L1 -2333 5475 5322 1361 141 70 0 chr2 29292432 29292673 -221395181 - L1MA5 LINE L1 -3 6297 6040 656 256 27 50 chr2 29293346 29293608 -221394246 - HAL1 LINE L1 -8 2499 2244 658 246 35 10 chr2 29293671 29293874 -221393980 - HAL1 LINE L1 -768 1739 1532 858 274 14 18 chr2 29293879 29294098 -221393756 - MER58A DNA MER1_type -1 223 6 273 276 60 37 chr2 29294255 29294389 -221393465 - HAL1 LINE L1 -2369 138 2 1502 113 17 13 chr2 29294698 29294929 -221392925 + L1PA13 LINE L1 5928 6159 -4 921 197 94 0 chr2 29294939 29295142 -221392712 + Charlie1 DNA MER1_type 2536 2757 -4 191 167 189 87 chr2 29295185 29295295 -221392559 + MIR3 SINE MIR 35 157 -51 1248 91 26 108 chr2 29295324 29295556 -221392298 - L1PA7 LINE L1 -2 6152 5940 394 294 81 6 chr2 29300622 29300782 -221387072 + MIR SINE MIR 41 212 -50 1652 171 16 26 chr2 29300816 29301126 -221386728 + AluJb SINE Alu 1 307 -5 323 178 22 67 chr2 29301397 29301487 -221386367 - L1ME LINE L1 -346 5775 5690 1773 229 76 18 chr2 29302210 29302777 -221385077 + L1ME2 LINE L1 5541 6140 -24 192 40 0 0 chr2 29302790 29302815 -221385039 + (CA)n Simple_repeat Simple_repeat 2 26 0 1846 184 180 24 chr2 29302902 29303353 -221384501 - MLT1F1 LTR MaLR -2 565 45 496 274 137 45 chr2 29304329 29304665 -221383189 - MLT1J1 LTR MaLR -18 428 62 6312 189 164 26 chr2 29305071 29306613 -221381241 - MER52A LTR ERV1 0 1755 1 855 243 46 57 chr2 29307573 29307652 -221380202 - L1ME1 LINE L1 -6 6160 6082 1727 131 96 10 chr2 29307652 29307966 -221379888 - MER61A LTR ERV1 -2 341 1 855 243 46 57 chr2 29307966 29308129 -221379725 - L1ME1 LINE L1 -84 6082 5921 1652 196 32 0 chr2 29308129 29308410 -221379444 - AluJo SINE Alu -18 294 5 855 243 46 57 chr2 29308410 29308537 -221379317 - L1ME1 LINE L1 -245 5921 5794 2048 137 0 3 chr2 29308550 29308842 -221379012 - AluSx SINE Alu -15 297 7 2402 70 3 0 chr2 29309242 29309540 -221378314 + AluY SINE Alu 1 299 -12 2374 157 45 21 chr2 29309727 29310210 -221377644 + L1MB5 LINE L1 5672 6166 -8 654 253 124 0 chr2 29310339 29310612 -221377242 - L1ME4a LINE L1 -212 5909 5603 577 178 71 76 chr2 29310621 29310818 -221377036 - L1MC3 LINE L1 -9 7776 7581 276 60 100 0 chr2 29310818 29310868 -221376986 - MLT2A1 LTR ERVL 0 444 390 514 64 90 14 chr2 29310873 29311305 -221376549 + (TA)n Simple_repeat Simple_repeat 1 464 0 2083 93 3 0 chr2 29311305 29311596 -221376258 - MLT2A1 LTR ERVL -152 292 1 360 72 0 87 chr2 29311596 29311665 -221376189 - L1MC3 LINE L1 -200 7585 7523 25 0 0 0 chr2 29311711 29311736 -221376118 + AT_rich Low_complexity Low_complexity 1 25 0 234 143 48 0 chr2 29311737 29311800 -221376054 + (TA)n Simple_repeat Simple_repeat 1 66 0 2012 146 0 0 chr2 29311800 29312087 -221375767 - AluJb SINE Alu -23 289 3 988 139 77 5 chr2 29312089 29312297 -221375557 - L1MC3 LINE L1 -252 7533 7311 1848 116 44 47 chr2 29312401 29312499 -221375355 - L1MA9 LINE L1 -257 6055 5958 2197 120 0 17 chr2 29312499 29312799 -221375055 - AluSx SINE Alu -17 295 1 1848 116 44 47 chr2 29312799 29313061 -221374793 - L1MA9 LINE L1 -354 5958 5696 617 153 145 0 chr2 29313071 29313195 -221374659 - FLAM_C SINE Alu -1 142 1 2565 158 27 14 chr2 29313196 29314013 -221373841 - L1MA9 LINE L1 -617 5674 4847 * 3111 128 23 7 chr2 29314006 29314563 -221373291 + L1MA9 LINE L1 4268 4833 -1313 1731 178 0 0 chr2 29314786 29315056 -221372798 + AluJb SINE Alu 24 293 -19 268 326 32 11 chr2 29315313 29315408 -221372446 - MER5B DNA MER1_type -6 172 76 2071 139 7 0 chr2 29315430 29315732 -221372122 - AluSx SINE Alu -8 304 1 1577 105 13 0 chr2 29315883 29316122 -221371732 + L1MA5A LINE L1 6041 6282 -15 21 0 0 0 chr2 29316122 29316143 -221371711 + AT_rich Low_complexity Low_complexity 1 21 0 980 238 83 52 chr2 29316374 29316911 -221370943 + L1MC5 LINE L1 7316 7874 -87 3176 152 41 11 chr2 29316911 29317445 -221370409 + MER44D DNA MER2_type 1 605 0 980 238 83 52 chr2 29317445 29317487 -221370367 + L1MC5 LINE L1 7874 7913 -48 511 250 0 9 chr2 29317516 29317628 -221370226 + L2 LINE L2 3200 3310 -3 1024 171 0 0 chr2 29317659 29317823 -221370031 + FAM SINE Alu 1 164 -11 2355 96 0 10 chr2 29317836 29318150 -221369704 + AluY SINE Alu 1 311 0 1869 98 113 0 chr2 29319161 29319435 -221368419 - AluSx SINE Alu -7 305 1 308 300 90 36 chr2 29319443 29319666 -221368188 - L1ME LINE L1 -268 5853 5619 24 32 0 0 chr2 29319753 29319784 -221368070 + AT_rich Low_complexity Low_complexity 1 31 0 213 237 0 0 chr2 29321019 29321057 -221366797 + L2 LINE L2 3149 3186 -86 493 310 35 31 chr2 29322262 29322714 -221365140 - L1ME LINE L1 -1321 4825 4372 349 296 23 81 chr2 29323326 29323633 -221364221 + L1MDb LINE L1 782 1070 -5339 1073 159 6 0 chr2 29323665 29323828 -221364026 + FRAM SINE Alu 1 162 -14 322 109 47 0 chr2 29323841 29323905 -221363949 + L1MDb LINE L1 1112 1178 -5231 673 207 22 56 chr2 29323918 29324097 -221363757 + L1MD2 LINE L1 6136 6308 -51 189 304 90 60 chr2 29324224 29324523 -221363331 + L2 LINE L2 2599 2906 -408 712 315 117 19 chr2 29326100 29326459 -221361395 - L3 LINE CR1 -850 727 334 828 210 6 6 chr2 29327281 29327443 -221360411 - FRAM SINE Alu -14 162 1 182 135 54 0 chr2 29327806 29327843 -221360011 - L3 LINE CR1 -286 1291 1253 871 156 0 15 chr2 29328073 29328208 -221359646 + FLAM_C SINE Alu 1 133 0 1050 225 4 22 chr2 29328298 29328525 -221359329 + MER58A DNA MER1_type 2 224 0 2377 80 3 0 chr2 29329483 29329782 -221358072 - AluSp SINE Alu -13 300 1 1692 205 25 53 chr2 29329958 29330432 -221357422 - LTR40b LTR ERVL -1 461 1 236 360 124 19 chr2 29331601 29331762 -221356092 - L3b LINE CR1 -55 1528 1351 259 134 63 24 chr2 29333431 29333558 -221354296 + (CA)n Simple_repeat Simple_repeat 2 133 0 21 57 0 0 chr2 29334191 29334226 -221353628 + AT_rich Low_complexity Low_complexity 1 35 0 181 326 61 45 chr2 29334290 29334422 -221353432 + L2 LINE L2 3178 3311 -2 728 243 54 27 chr2 29335120 29335548 -221352306 - L1ME LINE L1 -626 5544 5093 2531 65 3 0 chr2 29335548 29335854 -221352000 - AluY SINE Alu -4 307 1 728 243 54 27 chr2 29335854 29336026 -221351828 - L1ME LINE L1 -1077 5093 4927 3538 205 35 48 chr2 29336089 29336166 -221351688 - L1MC/D LINE L1 -784 5345 5268 1793 145 51 61 chr2 29336166 29336365 -221351489 - MLT1B LTR MaLR 0 390 195 360 0 0 0 chr2 29336365 29336405 -221351449 + (TG)n Simple_repeat Simple_repeat 2 41 0 1793 145 51 61 chr2 29336405 29336599 -221351255 - MLT1B LTR MaLR -195 195 1 3538 205 35 48 chr2 29336599 29336646 -221351208 - L1MC/D LINE L1 -861 5268 5222 4239 137 20 20 chr2 29336646 29337406 -221350448 - L1MA4 LINE L1 -5 6295 5536 3538 205 35 48 chr2 29337406 29338409 -221349445 - L1MC/D LINE L1 -907 5222 4349 385 265 26 35 chr2 29338432 29338544 -221349310 - L1MC/D LINE L1 -3819 2310 2238 2524 66 0 0 chr2 29338544 29338847 -221349007 - AluY SINE Alu -8 303 1 385 265 26 35 chr2 29338847 29338972 -221348882 - L1MC/D LINE L1 -3891 2238 2113 247 246 210 12 chr2 29339358 29339525 -221348329 - L1MC/D LINE L1 -898 1592 1381 785 283 126 27 chr2 29339601 29340227 -221347627 - L1MC/D LINE L1 -4864 1255 568 375 346 38 28 chr2 29340286 29340497 -221347357 - L1MC/D LINE L1 -5640 479 267 829 153 8 15 chr2 29341144 29341275 -221346579 - FLAM_C SINE Alu -8 135 6 2545 68 0 7 chr2 29342779 29343089 -221344765 - AluY SINE Alu -3 308 1 2021 138 3 10 chr2 29344155 29344459 -221343395 + AluSc SINE Alu 1 302 -7 1106 133 13 0 chr2 29344459 29344617 -221343237 + AluSg/x SINE Alu 134 293 -19 247 284 15 0 chr2 29344823 29344890 -221342964 + L2 LINE L2 3245 3312 -1 255 261 84 34 chr2 29345076 29345195 -221342659 - L1ME4a LINE L1 -34 6087 5963 2210 117 3 3 chr2 29345210 29345508 -221342346 - AluSq SINE Alu -15 298 1 1911 146 7 0 chr2 29345827 29346122 -221341732 - AluSx SINE Alu -15 297 1 470 339 80 5 chr2 29346473 29346697 -221341157 + MIR SINE MIR 21 261 -1 280 316 105 26 chr2 29346911 29347063 -221340791 + MIR SINE MIR 53 216 -46 21 71 0 0 chr2 29347656 29347698 -221340156 + AT_rich Low_complexity Low_complexity 1 42 0 237 211 0 0 chr2 29347858 29347910 -221339944 + (TATG)n Simple_repeat Simple_repeat 1 52 0 2077 152 53 53 chr2 29347992 29348426 -221339428 - Tigger2a DNA MER2_type 0 434 1 370 319 90 30 chr2 29349472 29349638 -221338216 - MIR3 SINE MIR -17 191 16 464 290 101 18 chr2 29351271 29351488 -221336366 + L2 LINE L2 3078 3312 -1 2213 104 0 3 chr2 29351912 29352201 -221335653 - AluSx SINE Alu -24 288 1 2760 96 3 3 chr2 29354592 29354955 -221332899 + THE1B LTR MaLR 2 364 0 1715 87 0 5 chr2 29355501 29355719 -221332135 - AluSg SINE Alu -31 279 63 1437 140 40 0 chr2 29357036 29357286 -221330568 + L1MA6 LINE L1 6041 6300 0 278 275 55 18 chr2 29360978 29361087 -221326767 - MIR3 SINE MIR 0 208 96 23 54 0 0 chr2 29361248 29361285 -221326569 + AT_rich Low_complexity Low_complexity 1 37 0 1709 110 10 63 chr2 29361528 29361827 -221326027 - AluSx SINE Alu -11 301 19 1729 125 8 12 chr2 29362509 29362765 -221325089 + AluSx SINE Alu 32 286 -26 195 170 0 0 chr2 29364740 29364787 -221323067 + (CA)n Simple_repeat Simple_repeat 2 48 0 307 272 166 26 chr2 29364950 29365215 -221322639 - L1ME4a LINE L1 -201 5920 5619 565 248 89 30 chr2 29365251 29365521 -221322333 + L2 LINE L2 2262 2547 -767 341 328 109 55 chr2 29365578 29365984 -221321870 - L1ME4a LINE L1 -485 5636 5164 2236 114 10 0 chr2 29365984 29366281 -221321573 - AluSx SINE Alu -12 300 1 341 328 109 55 chr2 29366281 29366582 -221321272 - L1ME4a LINE L1 -957 5164 4881 190 231 0 0 chr2 29367013 29367052 -221320802 - MIR SINE MIR -111 151 113 689 188 118 6 chr2 29367452 29367622 -221320232 + MER53 DNA DNA 1 189 0 247 221 0 63 chr2 29367758 29367853 -221320001 - L1MC4 LINE L1 -1339 6703 6615 * 269 267 0 0 chr2 29367802 29367892 -221319962 + L1MC4 LINE L1 6614 6703 -1339 1234 285 77 44 chr2 29368199 29368533 -221319321 + L2 LINE L2 2200 2521 -792 2128 119 17 0 chr2 29368533 29368826 -221319028 + AluSx SINE Alu 1 298 -14 1234 285 77 44 chr2 29368826 29369362 -221318492 + L2 LINE L2 2521 3106 -207 270 252 46 93 chr2 29369625 29369991 -221317863 - L1MB7 LINE L1 -243 5941 5600 672 182 208 0 chr2 29370045 29370199 -221317655 - MER5A DNA MER1_type -3 186 1 867 236 83 77 chr2 29370352 29370512 -221317342 - HAL1 LINE L1 -960 1547 1389 2256 74 40 3 chr2 29370512 29370809 -221317045 - AluSg1 SINE Alu -1 308 1 867 236 83 77 chr2 29370809 29371140 -221316714 - HAL1 LINE L1 -1118 1389 1053 * 2999 172 42 63 chr2 29371114 29371629 -221316225 - L1MC3 LINE L1 0 7785 7287 2096 123 3 0 chr2 29371629 29371914 -221315940 - AluSq SINE Alu -27 286 1 2999 172 42 63 chr2 29371914 29372091 -221315763 - L1MC3 LINE L1 -498 7287 7108 625 249 102 18 chr2 29372143 29372368 -221315486 - HAL1 LINE L1 -1476 1031 788 1655 226 74 19 chr2 29372414 29372443 -221315411 - MLT1D LTR MaLR -5 500 474 192 40 0 0 chr2 29372443 29372468 -221315386 + (CCAA)n Simple_repeat Simple_repeat 2 26 0 1655 226 74 19 chr2 29372468 29372912 -221314942 - MLT1D LTR MaLR -31 474 1 258 311 48 42 chr2 29373037 29373204 -221314650 - HAL1 LINE L1 -2022 485 318 327 195 49 0 chr2 29373207 29373330 -221314524 + CT-rich Low_complexity Low_complexity 2 130 0 1654 175 0 0 chr2 29373333 29373596 -221314258 - AluJo SINE Alu -49 263 1 354 273 58 32 chr2 29373610 29373764 -221314090 - HAL1 LINE L1 -2220 287 130 264 59 0 0 chr2 29373801 29373835 -221314019 + (TG)n Simple_repeat Simple_repeat 2 35 0 848 198 39 11 chr2 29373879 29374061 -221313793 + MER5A DNA MER1_type 3 189 0 240 376 112 0 chr2 29375020 29375145 -221312709 - L2 LINE L2 0 3272 3134 23 0 0 0 chr2 29375938 29375961 -221311893 + AT_rich Low_complexity Low_complexity 1 23 0 2346 79 13 10 chr2 29376283 29376586 -221311268 + AluSp SINE Alu 1 304 -9 374 241 107 27 chr2 29377161 29377273 -221310581 - MIR SINE MIR -6 256 136 2068 98 0 4 chr2 29377455 29377719 -221310135 - AluSx SINE Alu -14 298 36 24 0 0 0 chr2 29377719 29377743 -221310111 + AT_rich Low_complexity Low_complexity 1 24 0 2132 99 10 0 chr2 29379717 29380009 -221307845 - AluSp SINE Alu -2 311 17 765 188 0 0 chr2 29380723 29380861 -221306993 + FLAM_C SINE Alu 2 139 -4 379 175 133 70 chr2 29381236 29381379 -221306475 + MER5B DNA MER1_type 22 173 -5 201 288 0 15 chr2 29381931 29381997 -221305857 + L2 LINE L2 3205 3269 -3 331 224 12 12 chr2 29382526 29382611 -221305243 - MIR SINE MIR -115 147 63 386 161 65 0 chr2 29383621 29383776 -221304078 + (TG)n Simple_repeat Simple_repeat 1 165 0 287 154 58 10 chr2 29383796 29383900 -221303954 + (TG)n Simple_repeat Simple_repeat 1 109 0 1229 167 47 33 chr2 29384039 29384315 -221303539 + AluSc SINE Alu 1 280 -19 310 307 166 10 chr2 29384703 29384908 -221302946 + MIR SINE MIR 5 241 -21 183 80 0 0 chr2 29384952 29384977 -221302877 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 537 255 45 44 chr2 29384994 29385248 -221302606 + MIR SINE MIR 8 262 0 224 333 0 0 chr2 29387584 29387662 -221300192 + MIR SINE MIR 75 152 -110 604 208 71 12 chr2 29387763 29387931 -221299923 - MER5B DNA MER1_type 0 178 1 587 227 33 20 chr2 29389229 29389379 -221298475 + MER103 DNA DNA 2 153 -13 512 194 37 0 chr2 29389513 29389621 -221298233 + MIR SINE MIR 80 191 -71 258 278 91 31 chr2 29390343 29390486 -221297368 + MIR3 SINE MIR 51 201 -7 207 162 0 0 chr2 29390731 29390768 -221297086 + (TTA)n Simple_repeat Simple_repeat 3 39 0 192 384 0 0 chr2 29391008 29391081 -221296773 - L2 LINE L2 -7 3265 3193 949 201 30 35 chr2 29391789 29391988 -221295866 - MER20 DNA MER1_type 0 219 22 408 275 42 0 chr2 29392082 29392202 -221295652 - L2 LINE L2 -4 3309 3185 2336 244 92 22 chr2 29392265 29393098 -221294756 - L2 LINE L2 -419 2895 2004 313 296 10 0 chr2 29393206 29393304 -221294550 + L2 LINE L2 3170 3268 -4 182 333 50 0 chr2 29393498 29393597 -221294257 - MIR SINE MIR -56 152 49 716 146 73 8 chr2 29393602 29393725 -221294129 + FLAM_C SINE Alu 2 132 -1 1464 201 0 52 chr2 29393735 29394044 -221293810 + AluJo SINE Alu 1 293 -19 1233 91 0 0 chr2 29394730 29394884 -221292970 + AluSx SINE Alu 1 154 -158 213 39 0 0 chr2 29395187 29395213 -221292641 + (A)n Simple_repeat Simple_repeat 1 26 0 1379 239 151 25 chr2 29395402 29395992 -221291862 - L1ME4a LINE L1 -65 6056 5393 2077 128 34 0 chr2 29395994 29396291 -221291563 - AluSx SINE Alu -5 307 1 243 290 80 6 chr2 29396355 29396517 -221291337 - L1ME4a LINE L1 -817 5329 5156 1378 215 36 4 chr2 29396517 29396796 -221291058 - AluJb SINE Alu -24 288 1 2297 100 3 7 chr2 29397918 29398228 -221289626 - AluSc SINE Alu 0 309 1 377 179 179 0 chr2 29398864 29398942 -221288912 + MER8 DNA MER2_type 142 233 -6 1592 185 139 37 chr2 29399213 29399667 -221288187 - MLT1D LTR MaLR -1 504 5 345 287 116 0 chr2 29400254 29400383 -221287471 + MIR SINE MIR 21 164 -98 210 294 64 9 chr2 29401073 29401182 -221286672 - MIR3 SINE MIR -16 192 78 311 252 35 52 chr2 29401592 29401707 -221286147 + MIR SINE MIR 70 182 -80 503 268 20 0 chr2 29401746 29401881 -221285973 + MER5A DNA MER1_type 1 153 -36 204 313 101 20 chr2 29402789 29402888 -221284966 - L2 LINE L2 -26 3287 3181 212 273 91 0 chr2 29402994 29403071 -221284783 + L2 LINE L2 3166 3249 -23 222 37 0 0 chr2 29404034 29404061 -221283793 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1487 171 9 101 chr2 29404174 29404502 -221283352 - AluJo SINE Alu 0 302 5 193 371 11 45 chr2 29404663 29404752 -221283102 + MIR SINE MIR 20 105 -157 1686 122 29 31 chr2 29405377 29405703 -221282151 + THE1C LTR MaLR 50 375 0 478 313 67 49 chr2 29405952 29406176 -221281678 + MIR SINE MIR 20 247 -15 254 256 77 68 chr2 29406766 29406912 -221280942 - MER5A DNA MER1_type -7 182 26 221 343 114 0 chr2 29406944 29407049 -221280805 - MIR SINE MIR -62 146 30 1727 180 25 0 chr2 29409076 29409360 -221278494 - AluJo SINE Alu -21 291 1 1883 252 104 35 chr2 29409376 29410361 -221277493 - L1MC5 LINE L1 -501 7460 6493 323 323 68 33 chr2 29410768 29411075 -221276779 - HAL1b LINE L1 -862 486 169 224 149 21 0 chr2 29411628 29411675 -221276179 + GA-rich Low_complexity Low_complexity 1 48 0 575 214 40 8 chr2 29412068 29412194 -221275660 + MIR SINE MIR 20 149 -59 334 357 40 2 chr2 29412763 29412913 -221274941 - MIR3 SINE MIR -36 172 34 180 203 40 108 chr2 29412996 29413070 -221274784 - MIR SINE MIR -108 154 86 2306 100 159 8 chr2 29413180 29413551 -221274303 + MSTA LTR MaLR 2 428 0 374 306 48 7 chr2 29414542 29414689 -221273165 + L1ME4a LINE L1 5969 6121 0 236 330 205 0 chr2 29415991 29416103 -221271751 - L2 LINE L2 -1 3271 3137 807 295 86 26 chr2 29416925 29417345 -221270509 - LTR16B LTR ERVL -2 462 18 371 293 147 13 chr2 29417906 29418056 -221269798 + MIR SINE MIR 93 262 0 682 280 196 56 chr2 29419081 29419500 -221268354 + L3 LINE CR1 800 1159 -418 2421 91 3 3 chr2 29419500 29419807 -221268047 + AluSq SINE Alu 1 307 -6 682 280 196 56 chr2 29419807 29420047 -221267807 + L3 LINE CR1 1159 1551 -26 234 81 0 0 chr2 29421003 29421040 -221266814 + (CAGGG)n Simple_repeat Simple_repeat 4 40 0 326 307 36 14 chr2 29421785 29421925 -221265929 + MIR SINE MIR 69 211 -51 1170 172 172 10 chr2 29422286 29422577 -221265277 + MER2 DNA MER2_type 1 338 -7 2238 83 20 3 chr2 29423659 29423961 -221263893 + AluSx SINE Alu 1 307 -5 238 171 98 110 chr2 29425231 29425313 -221262541 - MLT2F LTR ERVL -2 661 581 1858 191 0 10 chr2 29425724 29426038 -221261816 - AluJo SINE Alu -1 311 1 204 323 23 114 chr2 29426368 29426588 -221261266 - L2 LINE L2 -81 3191 2992 361 284 18 9 chr2 29429340 29429449 -221258405 + MIR SINE MIR 102 211 -51 228 67 0 0 chr2 29431534 29431564 -221256290 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 254 306 37 37 chr2 29431576 29431684 -221256170 - L2 LINE L2 -28 3244 3137 184 333 48 12 chr2 29431965 29432049 -221255805 + L2 LINE L2 3180 3266 -47 206 292 0 0 chr2 29432093 29432141 -221255713 + GA-rich Low_complexity Low_complexity 1 48 0 243 146 0 0 chr2 29432363 29432404 -221255450 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 369 286 79 21 chr2 29433009 29433149 -221254705 - MIR3 SINE MIR -41 167 20 198 333 52 52 chr2 29433982 29434117 -221253737 + L2 LINE L2 3119 3253 -19 623 169 0 1 chr2 29435546 29435676 -221252178 - L1MB1 LINE L1 -3 6165 6057 357 276 75 22 chr2 29436541 29436691 -221251163 + MIR SINE MIR 2 161 -47 273 303 110 0 chr2 29437456 29437565 -221250289 - MIR SINE MIR -36 226 106 928 236 23 16 chr2 29438226 29438484 -221249370 + MIR SINE MIR 3 262 0 674 248 50 0 chr2 29438593 29438754 -221249100 + MER63A DNA MER1_type 13 181 -29 301 58 39 0 chr2 29439153 29439205 -221248649 + (TG)n Simple_repeat Simple_repeat 2 55 0 245 294 0 15 chr2 29439289 29439357 -221248497 + MIR3 SINE MIR 5 71 -137 2402 81 13 7 chr2 29439597 29439904 -221247950 + AluY SINE Alu 1 309 -2 243 0 0 0 chr2 29440045 29440072 -221247782 + (TC)n Simple_repeat Simple_repeat 2 28 0 373 238 0 0 chr2 29440822 29440902 -221246952 - MER116 DNA Mariner 0 80 1 2406 99 14 91 chr2 29441414 29441856 -221245998 - LTR8 LTR ERV1 -283 408 1 256 254 130 65 chr2 29442407 29442592 -221245262 - MIR SINE MIR -36 226 30 256 265 29 69 chr2 29443745 29443847 -221244007 - MIR SINE MIR -74 188 91 719 295 40 9 chr2 29444802 29445029 -221242825 - MIR SINE MIR 0 262 29 186 200 55 73 chr2 29445218 29445273 -221242581 + MIR SINE MIR 159 212 -50 608 179 237 32 chr2 29445935 29446091 -221241763 + MER5A DNA MER1_type 1 188 -1 372 236 225 7 chr2 29446695 29446847 -221241007 + MIR SINE MIR 20 204 -58 224 263 34 68 chr2 29447606 29447724 -221240130 + MIR SINE MIR 107 220 -42 822 274 93 68 chr2 29447858 29448466 -221239388 - L1ME4a LINE L1 -3 6118 5527 396 0 0 0 chr2 29448466 29448510 -221239344 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1761 146 0 57 chr2 29448512 29448813 -221239041 - AluJb SINE Alu -28 284 1 822 274 93 68 chr2 29448813 29448846 -221239008 - L1ME4a LINE L1 -594 5527 5458 384 123 0 74 chr2 29448854 29448935 -221238919 - MADE1 DNA Mariner -5 75 1 190 393 41 8 chr2 29449009 29449131 -221238723 + L2 LINE L2 2941 3066 -206 281 246 18 88 chr2 29449286 29449400 -221238454 - MLT1G LTR MaLR -475 115 10 182 212 0 0 chr2 29449519 29449552 -221238302 - L2 LINE L2 -18 3295 3263 350 264 28 38 chr2 29450004 29450110 -221237744 - MIR3 SINE MIR -22 186 82 1732 157 33 52 chr2 29450112 29450417 -221237437 + AluJo SINE Alu 1 299 -13 2350 91 0 13 chr2 29450441 29450749 -221237105 + AluY SINE Alu 1 304 -7 1785 161 33 14 chr2 29451010 29451371 -221236483 - L1MB2 LINE L1 0 6171 5804 672 171 0 36 chr2 29451371 29451511 -221236343 - L1MB2 LINE L1 -578 5593 5459 915 183 0 43 chr2 29451995 29452159 -221235695 - FRAM SINE Alu -9 157 1 575 319 80 17 chr2 29452559 29452860 -221234994 - L2 LINE L2 0 3313 2994 220 318 0 0 chr2 29452959 29453025 -221234829 + MIR SINE MIR 188 253 -9 326 334 140 14 chr2 29453781 29454311 -221233543 + L2 LINE L2 2449 3044 -269 2076 113 0 4 chr2 29454320 29454595 -221233259 - AluSx SINE Alu -16 296 23 287 270 164 40 chr2 29454816 29454968 -221232886 - L2 LINE L2 -13 3259 3089 307 326 7 43 chr2 29455921 29456059 -221231795 - MER5A DNA MER1_type 0 189 57 434 280 48 8 chr2 29456132 29456257 -221231597 - MIR3 SINE MIR -68 140 11 207 327 0 0 chr2 29457783 29457835 -221230019 + polypyrimidine Low_complexity Low_complexity 2 53 0 243 0 0 0 chr2 29458380 29458407 -221229447 + (TG)n Simple_repeat Simple_repeat 2 28 0 207 200 0 22 chr2 29458438 29458483 -221229371 + GA-rich Low_complexity Low_complexity 4 47 0 201 258 0 97 chr2 29460123 29460185 -221227669 - MIR3 SINE MIR -2 206 151 192 125 0 0 chr2 29460590 29460622 -221227232 + (CACCC)n Simple_repeat Simple_repeat 3 34 0 263 283 81 10 chr2 29461605 29461704 -221226150 - MIR SINE MIR -28 234 129 22 0 0 0 chr2 29462576 29462598 -221225256 + AT_rich Low_complexity Low_complexity 1 22 0 450 309 128 5 chr2 29463263 29463467 -221224387 - MIR SINE MIR -32 230 2 2361 94 10 0 chr2 29464376 29464684 -221223170 - AluY SINE Alu 0 311 1 219 336 46 23 chr2 29464719 29464850 -221223004 - MIR SINE MIR -57 151 18 3053 118 43 4 chr2 29464925 29465393 -221222461 + LTR19A LTR ERV1 1 486 0 201 133 0 0 chr2 29465627 29465657 -221222197 + (TGGA)n Simple_repeat Simple_repeat 4 33 0 244 311 33 0 chr2 29465963 29466053 -221221801 - MIR SINE MIR -118 144 52 474 272 0 0 chr2 29466158 29466261 -221221593 + MER5A DNA MER1_type 4 106 -83 219 36 0 0 chr2 29466373 29466401 -221221453 + (TG)n Simple_repeat Simple_repeat 2 29 0 198 314 183 15 chr2 29467045 29467182 -221220672 + L3 LINE CR1 1298 1457 -120 289 226 25 63 chr2 29467689 29467848 -221220006 + L1ME4a LINE L1 5969 6121 0 519 216 201 22 chr2 29467867 29468135 -221219719 + L1ME4a LINE L1 5803 6118 -3 317 331 106 0 chr2 29468366 29468508 -221219346 + MIR SINE MIR 100 256 -6 231 238 95 0 chr2 29468725 29468788 -221219066 + MIR SINE MIR 83 151 -111 267 278 0 42 chr2 29469816 29469888 -221217966 - MIR SINE MIR -158 104 36 503 272 178 0 chr2 29469915 29470095 -221217759 + MIR SINE MIR 35 246 -16 228 228 0 0 chr2 29474186 29474243 -221213611 + (TG)n Simple_repeat Simple_repeat 1 57 0 180 0 0 0 chr2 29474749 29474769 -221213085 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 1831 150 19 26 chr2 29475468 29475775 -221212079 - AluSx SINE Alu -7 305 1 1680 130 7 55 chr2 29475786 29476094 -221211760 - AluSx SINE Alu -19 293 1 334 294 34 45 chr2 29476630 29476807 -221211047 - MER5B DNA MER1_type 0 178 4 445 169 12 27 chr2 29477175 29477279 -221210575 + MLT1J1 LTR MaLR 28 130 -279 285 286 71 32 chr2 29478046 29478200 -221209654 + MLT1J2 LTR MaLR 280 439 -11 2225 97 0 3 chr2 29478904 29479242 -221208612 + AluSx SINE Alu 3 312 0 366 298 76 8 chr2 29479248 29479379 -221208475 + MIR SINE MIR 53 192 -70 240 269 90 0 chr2 29480418 29480485 -221207369 + MIR SINE MIR 94 166 -96 1853 150 32 35 chr2 29481312 29481625 -221206229 + AluJo SINE Alu 1 312 0 626 238 18 12 chr2 29481723 29481891 -221205963 + MIR SINE MIR 93 261 -1 436 265 73 0 chr2 29482790 29482941 -221204913 + MARNA DNA Mariner 9 170 -416 321 360 20 0 chr2 29483540 29483640 -221204214 - L2 LINE L2 -2 3270 3169 612 266 30 12 chr2 29484917 29485086 -221202768 - MIR SINE MIR -71 191 20 2132 140 0 0 chr2 29486466 29486773 -221201081 - AluSx SINE Alu -5 307 1 201 292 79 0 chr2 29487434 29487523 -221200331 + L2 LINE L2 3168 3263 -9 404 167 19 19 chr2 29488351 29488459 -221199395 + GA-rich Low_complexity Low_complexity 2 109 0 608 214 101 36 chr2 29488557 29488725 -221199129 + MIR SINE MIR 84 262 0 532 301 14 7 chr2 29490081 29490227 -221197627 - MIR SINE MIR -108 154 8 192 299 0 46 chr2 29490325 29490412 -221197442 + L3b LINE CR1 1137 1219 -364 239 233 132 82 chr2 29490860 29491021 -221196833 + MIR3 SINE MIR 2 170 -62 236 237 17 17 chr2 29491382 29491441 -221196413 + MIR SINE MIR 17 75 -133 397 256 0 0 chr2 29491490 29491580 -221196274 - MER96 DNA MER1_type? -85 90 1 645 272 28 11 chr2 29491584 29491764 -221196090 + MIR SINE MIR 68 250 -12 377 269 24 46 chr2 29492468 29492620 -221195234 + MIR SINE MIR 36 183 -62 310 328 57 23 chr2 29492854 29493031 -221194823 - MIR3 SINE MIR -24 184 2 188 176 0 0 chr2 29493641 29493675 -221194179 + L2 LINE L2 3257 3290 -23 210 200 20 20 chr2 29493711 29493761 -221194093 + L2 LINE L2 3262 3311 -2 247 250 13 13 chr2 29494044 29494120 -221193734 + GA-rich Low_complexity Low_complexity 4 79 0 2064 106 51 0 chr2 29496038 29496311 -221191543 + AluSx SINE Alu 1 287 -25 206 295 16 0 chr2 29496900 29496961 -221190893 - MIR SINE MIR -56 152 91 393 293 45 51 chr2 29497364 29497521 -221190333 + MIR SINE MIR 12 167 -95 502 223 8 62 chr2 29498334 29498464 -221189390 - MIR3 SINE MIR -39 169 47 318 302 174 7 chr2 29498525 29498674 -221189180 + MIR3 SINE MIR 10 183 -25 210 209 23 0 chr2 29501579 29501622 -221186232 - L2 LINE L2 -1 3312 3269 346 270 155 29 chr2 29501638 29501812 -221186042 + MIR SINE MIR 10 205 -57 2342 97 0 19 chr2 29502474 29502782 -221185072 + AluSx SINE Alu 1 302 -10 249 273 124 41 chr2 29503553 29503674 -221184180 + L2 LINE L2 3137 3267 -5 217 391 16 0 chr2 29504200 29504264 -221183590 - L2 LINE L2 -92 3180 3116 2460 90 0 0 chr2 29504442 29504743 -221183111 + AluSq SINE Alu 1 301 -12 5153 136 14 28 chr2 29505014 29506246 -221181608 + L1PA16 LINE L1 4925 6151 -15 449 150 0 62 chr2 29506342 29506422 -221181432 + MER5A DNA MER1_type 1 75 -114 2201 112 3 0 chr2 29506422 29506709 -221181145 + AluSg SINE Alu 1 288 -22 421 242 199 25 chr2 29507273 29507434 -221180420 - MER5A DNA MER1_type 0 189 1 22 0 0 0 chr2 29508021 29508043 -221179811 + AT_rich Low_complexity Low_complexity 1 22 0 197 244 81 58 chr2 29509064 29509150 -221178704 - L2 LINE L2 -32 3240 3153 768 295 51 17 chr2 29509234 29509471 -221178383 - MIR SINE MIR -16 246 2 2447 70 7 7 chr2 29510290 29510590 -221177264 - AluY SINE Alu -11 300 1 799 289 77 35 chr2 29511083 29511460 -221176394 + L3 LINE CR1 1112 1504 -73 192 276 0 35 chr2 29512271 29512329 -221175525 + MIR SINE MIR 89 144 -118 227 240 0 0 chr2 29512360 29512410 -221175444 + L2 LINE L2 3223 3272 0 558 283 11 13 chr2 29513041 29513208 -221174646 - MIR3 SINE MIR -67 141 9 766 242 72 92 chr2 29513387 29513722 -221174132 + MLT1I LTR MaLR 74 401 -8 2121 108 0 0 chr2 29514487 29514786 -221173068 + AluSq SINE Alu 14 312 0 486 299 32 13 chr2 29514954 29515111 -221172743 + MIR SINE MIR 33 192 -70 510 240 122 5 chr2 29515843 29516006 -221171848 + MER5A DNA MER1_type 4 189 0 357 208 78 58 chr2 29516297 29516451 -221171403 + L1ME4a LINE L1 5961 6117 -4 397 237 191 8 chr2 29517291 29517422 -221170432 - MIR SINE MIR 0 262 108 669 271 55 25 chr2 29517562 29517798 -221170056 + MIR SINE MIR 13 255 -7 305 303 0 46 chr2 29518201 29518310 -221169544 + MIR SINE MIR 42 145 -117 448 167 58 58 chr2 29519290 29519410 -221168444 + L1MB8 LINE L1 5413 5532 -642 925 155 96 46 chr2 29519417 29519656 -221168198 + L1MB8 LINE L1 5928 6178 0 267 306 20 27 chr2 29519970 29520117 -221167737 + HAL1b LINE L1 313 458 -890 2110 139 10 0 chr2 29520637 29520946 -221166908 + AluSx SINE Alu 1 312 0 318 184 141 8 chr2 29523743 29523866 -221163988 + MLT1L LTR MaLR 211 435 -180 621 297 81 0 chr2 29524505 29524714 -221163140 + L2 LINE L2 3083 3308 -5 217 320 0 0 chr2 29524991 29525069 -221162785 + (CA)n Simple_repeat Simple_repeat 1 78 0 2167 142 7 0 chr2 29525090 29525400 -221162454 - AluSx SINE Alu 0 312 1 2324 89 10 20 chr2 29525788 29526115 -221161739 + AluSq SINE Alu 1 313 0 255 290 48 90 chr2 29526632 29526777 -221161077 - MIR SINE MIR -47 215 77 1766 252 91 27 chr2 29526984 29527532 -221160322 + MLT1E LTR MaLR 6 588 -5 307 277 0 24 chr2 29528567 29528650 -221159204 + L2 LINE L2 3184 3264 -8 394 250 101 26 chr2 29528828 29528975 -221158879 + MIR SINE MIR 26 172 -36 525 264 123 33 chr2 29528982 29529194 -221158660 - MIR SINE MIR -30 232 2 305 208 113 42 chr2 29530356 29530468 -221157386 + MIR SINE MIR 66 189 -19 205 200 44 0 chr2 29530443 29530488 -221157366 + L2 LINE L2 3207 3253 -19 * 518 238 26 79 chr2 29530579 29530768 -221157086 - MER5A DNA MER1_type -4 185 7 364 165 10 10 chr2 29532191 29532288 -221155566 + GA-rich Low_complexity Low_complexity 2 98 0 198 279 231 27 chr2 29532918 29533065 -221154789 + MIR SINE MIR 7 183 -79 1442 272 21 12 chr2 29536974 29537401 -221150453 + L1MB7 LINE L1 5745 6175 -9 205 270 48 16 chr2 29540196 29540259 -221147595 + MIR SINE MIR 31 95 -167 208 275 114 69 chr2 29544598 29544729 -221143125 - L2 LINE L2 -1018 2296 2160 1750 121 22 104 chr2 29595154 29595509 -221092345 + MSTA LTR MaLR 103 428 0 361 313 38 92 chr2 29595696 29596118 -221091736 - L2 LINE L2 -276 3037 2633 191 204 68 0 chr2 29596703 29596747 -221091107 + MIR3 SINE MIR 111 157 -51 297 333 114 23 chr2 29596751 29596883 -221090971 - MER5A DNA MER1_type -2 187 44 356 267 198 0 chr2 29596938 29597054 -221090800 + MER5A DNA MER1_type 45 183 -6 5953 35 3 0 chr2 29598580 29599244 -221088610 + L1PA4 LINE L1 5490 6155 0 259 211 256 33 chr2 29600346 29600436 -221087418 - MIR3 SINE MIR -2 206 97 2849 282 75 20 chr2 29600462 29601854 -221086000 + L2 LINE L2 1838 3311 -2 219 69 0 0 chr2 29601862 29601891 -221085963 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 208 349 91 15 chr2 29602176 29602308 -221085546 + L2 LINE L2 2555 2696 -618 394 220 58 64 chr2 29602624 29602797 -221085057 + MER113 DNA MER1_type? 44 215 -306 204 270 0 0 chr2 29602945 29603008 -221084846 + L2 LINE L2 2911 2973 -299 319 256 85 8 chr2 29603033 29603153 -221084701 - HAL1 LINE L1 0 2507 2373 2129 128 0 25 chr2 29603153 29603511 -221084343 - L1MB3 LINE L1 0 6183 5835 1418 272 13 15 chr2 29603533 29604007 -221083847 - HAL1 LINE L1 -684 1823 1351 252 148 0 0 chr2 29604021 29604052 -221083802 + (TG)n Simple_repeat Simple_repeat 1 34 -20 240 35 0 0 chr2 29604052 29604081 -221083773 + (GA)n Simple_repeat Simple_repeat 1 29 0 252 148 0 0 chr2 29604081 29604103 -221083751 + (TG)n Simple_repeat Simple_repeat 33 54 0 392 270 82 25 chr2 29604196 29604355 -221083499 - HAL1 LINE L1 -1606 901 734 895 238 31 0 chr2 29605056 29605249 -221082605 - MER21B LTR ERV1 -664 199 1 292 234 234 0 chr2 29606441 29606535 -221081319 + MER91C DNA MER1_type 2 117 -23 4023 193 48 8 chr2 29607269 29608099 -221079755 + MER21B LTR ERV1 1 863 0 293 326 174 20 chr2 29608288 29608484 -221079370 + MIR SINE MIR 29 254 -8 1879 146 14 0 chr2 29608614 29608889 -221078965 + AluSx SINE Alu 1 279 -33 300 261 157 17 chr2 29609004 29609119 -221078735 - MIR3 SINE MIR -64 144 14 290 207 135 9 chr2 29610897 29611008 -221076846 + L1ME1 LINE L1 6024 6148 -18 248 261 43 29 chr2 29611097 29611166 -221076688 + MIR3 SINE MIR 128 197 -11 860 279 34 0 chr2 29611347 29611555 -221076299 - MIR SINE MIR -5 257 43 311 327 116 8 chr2 29612087 29612258 -221075596 + MIR3 SINE MIR 3 188 -62 194 330 11 0 chr2 29613101 29613189 -221074665 + MIR SINE MIR 48 136 -72 330 206 0 0 chr2 29614570 29614643 -221073211 - MSTB2 LTR MaLR 0 457 385 206 248 41 50 chr2 29615438 29615559 -221072295 + GA-rich Low_complexity Low_complexity 1 120 0 572 339 62 18 chr2 29615912 29616136 -221071718 - MIR SINE MIR -21 241 8 473 276 153 15 chr2 29616391 29616587 -221071267 - MIR SINE MIR -37 225 3 1928 161 3 7 chr2 29616736 29617046 -221070808 - AluSx SINE Alu -3 309 1 349 283 55 55 chr2 29617687 29617832 -221070022 + L2 LINE L2 3169 3313 0 240 191 21 0 chr2 29618249 29618296 -221069558 + CT-rich Low_complexity Low_complexity 1 48 0 198 368 84 25 chr2 29619299 29619538 -221068316 + L2 LINE L2 2612 2864 -450 189 306 159 19 chr2 29619581 29619738 -221068116 - MIR SINE MIR -8 254 76 1814 168 47 0 chr2 29619823 29620121 -221067733 - AluJo SINE Alu 0 312 1 204 280 40 0 chr2 29620327 29620377 -221067477 + L2 LINE L2 3200 3251 -21 495 363 106 3 chr2 29620859 29621162 -221066692 - L3 LINE CR1 -1050 527 194 238 355 62 47 chr2 29621229 29621440 -221066414 - L3b LINE CR1 -12 1571 1358 290 267 56 11 chr2 29621448 29621538 -221066316 + MIR3 SINE MIR 13 106 -102 2899 144 35 1 chr2 29621552 29622126 -221065728 - L1MA4 LINE L1 -7 6346 5728 * 8552 201 43 10 chr2 29622123 29623551 -221064303 - L1MA4 LINE L1 -1968 4360 2980 2589 79 37 8 chr2 29623551 29623905 -221063949 - THE1B LTR MaLR 0 364 1 8552 201 43 10 chr2 29623905 29626693 -221061161 - L1MA4 LINE L1 -3348 2980 1 30 77 0 0 chr2 29626718 29626783 -221061071 + AT_rich Low_complexity Low_complexity 1 65 0 17965 27 2 0 chr2 29627010 29629925 -221057929 - L1PA3 LINE L1 0 6155 3236 400 251 120 87 chr2 29629925 29630200 -221057654 - L1ME4a LINE L1 -141 6478 6195 268 326 22 0 chr2 29630472 29630561 -221057293 + MIR SINE MIR 56 146 -116 648 213 0 8 chr2 29630733 29630860 -221056994 - FLAM_C SINE Alu -17 126 1 3088 226 81 14 chr2 29630865 29631952 -221055902 - L1ME4a LINE L1 -820 5824 4665 507 100 0 40 chr2 29632035 29632135 -221055719 + (TCCCC)n Simple_repeat Simple_repeat 2 97 0 4718 249 54 54 chr2 29632159 29635812 -221052042 - L1M4c LINE L1 -2036 4608 883 1926 171 7 0 chr2 29635860 29636158 -221051696 - 7SLRNA srpRNA srpRNA -20 300 1 2314 122 0 0 chr2 29637929 29638240 -221049614 + AluSx SINE Alu 1 311 -1 212 271 59 12 chr2 29639134 29639219 -221048635 - MIR3 SINE MIR -39 169 81 180 367 46 18 chr2 29639630 29639739 -221048115 + MIR SINE MIR 10 121 -141 310 321 27 27 chr2 29639749 29639861 -221047993 - L2 LINE L2 -10 3262 3151 1529 170 132 62 chr2 29640528 29640982 -221046872 - MLT1D LTR MaLR 0 505 20 504 224 135 26 chr2 29641331 29641487 -221046367 - MIR3 SINE MIR -21 187 15 528 279 86 10 chr2 29642388 29642772 -221045082 - L1ME4a LINE L1 -2 6119 5707 243 237 65 21 chr2 29643283 29643376 -221044478 + Charlie7 DNA MER1_type 2515 2611 -1 1528 251 33 15 chr2 29644477 29644931 -221042923 + MLT1C LTR MaLR 6 467 0 938 297 27 33 chr2 29646979 29647219 -221040635 + L1ME3A LINE L1 5419 5656 -514 1906 113 44 118 chr2 29647219 29647583 -221040271 - MER1B DNA MER1_type 0 337 1 938 297 27 33 chr2 29647583 29647793 -221040061 + L1ME3A LINE L1 5656 5866 -304 357 324 28 21 chr2 29648091 29648233 -221039621 + MER5B DNA MER1_type 31 173 -5 399 21 0 0 chr2 29648241 29648289 -221039565 + (CA)n Simple_repeat Simple_repeat 2 49 0 281 320 10 0 chr2 29648640 29648743 -221039111 + MIR SINE MIR 33 136 -72 830 191 5 31 chr2 29649195 29649389 -221038465 + MER53 DNA DNA 1 189 0 307 320 27 39 chr2 29650153 29650332 -221037522 + MIR SINE MIR 6 185 -70 6663 56 11 29 chr2 29650395 29651378 -221036476 + L1PA7 LINE L1 5189 6154 0 187 54 54 0 chr2 29651762 29651799 -221036055 + A-rich Low_complexity Low_complexity 37 75 0 810 113 0 0 chr2 29651802 29651917 -221035937 + L1PA8 LINE L1 6056 6170 -2 240 364 25 0 chr2 29654101 29654219 -221033635 - MIR SINE MIR -36 226 106 249 324 47 20 chr2 29654761 29654909 -221032945 + MIR3 SINE MIR 52 203 -5 2266 94 7 0 chr2 29655098 29655397 -221032457 + AluSp SINE Alu 1 301 -12 415 314 89 0 chr2 29656537 29656706 -221031148 - MIR SINE MIR -10 252 69 2534 109 17 3 chr2 29657422 29657781 -221030073 - THE1B LTR MaLR 0 364 1 188 282 51 13 chr2 29659665 29659743 -221028111 + MIR SINE MIR 60 140 -68 2330 84 0 0 chr2 29659791 29660075 -221027779 + AluSx SINE Alu 22 305 -7 417 20 0 0 chr2 29660075 29660125 -221027729 + (TA)n Simple_repeat Simple_repeat 2 51 0 441 355 27 18 chr2 29660422 29660642 -221027212 + MIR SINE MIR 13 234 -28 512 264 86 0 chr2 29660881 29661021 -221026833 + MIR3 SINE MIR 46 197 -11 496 275 37 63 chr2 29661592 29661781 -221026073 - MIR3 SINE MIR -9 199 16 495 0 0 0 chr2 29661810 29661865 -221025989 + (TG)n Simple_repeat Simple_repeat 2 56 0 235 184 20 0 chr2 29662847 29662896 -221024958 + L3 LINE CR1 1455 1504 -73 2101 128 0 3 chr2 29662915 29663203 -221024651 - AluSx SINE Alu -25 287 1 295 224 156 19 chr2 29663536 29663709 -221024145 + MIR SINE MIR 5 197 -11 2423 94 5 77 chr2 29664786 29665178 -221022676 + THE1B LTR MaLR 1 364 0 354 45 0 0 chr2 29665327 29665371 -221022483 + (TG)n Simple_repeat Simple_repeat 1 44 0 1839 153 18 0 chr2 29665371 29665645 -221022209 - AluSx SINE Alu -33 279 1 195 312 141 54 chr2 29666098 29666396 -221021458 + L2 LINE L2 2933 3256 -16 228 316 10 0 chr2 29666601 29666699 -221021155 + (TCTCTG)n Simple_repeat Simple_repeat 3 101 0 2112 211 45 11 chr2 29667750 29668196 -221019658 - MLT1C LTR MaLR 0 467 7 26 0 0 0 chr2 29668578 29668604 -221019250 + AT_rich Low_complexity Low_complexity 1 26 0 219 201 19 6 chr2 29670257 29670318 -221017536 - MIR SINE MIR -61 147 109 227 208 42 0 chr2 29671105 29671153 -221016701 + HSMAR1 DNA Mariner 3 52 -1235 2268 70 0 85 chr2 29671697 29672025 -221015829 + AluY SINE Alu 1 300 -11 261 353 33 0 chr2 29673443 29673565 -221014289 - MIR SINE MIR -37 225 100 219 232 29 14 chr2 29673678 29673747 -221014107 + GA-rich Low_complexity Low_complexity 1 70 0 634 314 32 20 chr2 29674291 29674539 -221013315 - MIR SINE MIR -3 259 9 1784 275 193 12 chr2 29675955 29676943 -221010911 + L2 LINE L2 943 2109 -1205 1514 259 194 16 chr2 29677379 29678337 -221009517 + L2 LINE L2 2155 3312 -1 215 269 62 97 chr2 29678363 29678508 -221009346 + MIR SINE MIR 65 204 -58 203 293 0 13 chr2 29679438 29679513 -221008341 + MIR3 SINE MIR 134 207 -1 278 286 79 0 chr2 29680079 29680205 -221007649 + L2 LINE L2 2924 3059 -213 319 221 187 1 chr2 29681562 29681670 -221006184 - MIR SINE MIR -62 146 60 245 327 58 26 chr2 29682210 29682378 -221005476 + MIR SINE MIR 44 214 -48 224 382 65 12 chr2 29682614 29682784 -221005070 - MIR3 SINE MIR -4 204 26 510 284 57 26 chr2 29682914 29683108 -221004746 - MIR SINE MIR -6 256 57 258 319 44 0 chr2 29683109 29683222 -221004632 - L2 LINE L2 0 3272 3155 207 342 17 25 chr2 29683343 29683463 -221004391 - L2 LINE L2 -190 3082 2964 295 207 58 0 chr2 29684068 29684155 -221003699 + GA-rich Low_complexity Low_complexity 4 95 0 384 208 47 28 chr2 29684572 29684678 -221003176 - L1ME4a LINE L1 -30 6091 5984 2058 166 14 17 chr2 29687344 29687705 -221000149 + MLT1A1 LTR MaLR 3 362 -3 690 306 20 28 chr2 29688180 29688428 -220999426 + MIR SINE MIR 17 262 0 368 342 0 0 chr2 29689116 29689233 -220998621 + L3 LINE CR1 183 299 -1278 338 322 25 0 chr2 29689449 29689567 -220998287 + L1ME4a LINE L1 5357 5477 -2331 47 53 0 0 chr2 29689571 29689646 -220998208 + AT_rich Low_complexity Low_complexity 1 75 0 27 29 0 0 chr2 29689710 29689744 -220998110 + AT_rich Low_complexity Low_complexity 1 34 0 183 129 0 0 chr2 29690222 29690253 -220997601 + (TAG)n Simple_repeat Simple_repeat 1 31 0 659 293 50 25 chr2 29690253 29690333 -220997521 - MIR SINE MIR 0 262 185 2494 133 5 8 chr2 29690333 29690709 -220997145 + THE1C LTR MaLR 1 375 0 659 293 50 25 chr2 29690709 29690867 -220996987 - MIR SINE MIR -77 185 18 643 223 211 4 chr2 29690895 29691160 -220996694 + L1ME4a LINE L1 5786 6105 -16 208 292 31 31 chr2 29691412 29691477 -220996377 + L2 LINE L2 3206 3270 -2 208 208 97 69 chr2 29691474 29691546 -220996308 + L3 LINE CR1 626 699 -878 522 287 84 48 chr2 29691627 29692090 -220995764 + L1ME4a LINE L1 5584 6063 -58 324 359 55 13 chr2 29692228 29692465 -220995389 + L3 LINE CR1 926 1172 -405 210 256 39 93 chr2 29692906 29693035 -220994819 - L2 LINE L2 0 3272 3151 1855 168 6 19 chr2 29693724 29694039 -220993815 + AluJo SINE Alu 1 311 -1 2174 116 0 7 chr2 29694046 29694347 -220993507 + AluSc SINE Alu 1 299 -10 232 285 76 62 chr2 29694378 29694522 -220993332 + MIR SINE MIR 47 192 -70 284 313 0 30 chr2 29695066 29695232 -220992622 + GA-rich Low_complexity Low_complexity 2 162 0 * 398 262 24 0 chr2 29695108 29695234 -220992620 + (CAGA)n Simple_repeat Simple_repeat 2 130 0 2735 152 83 25 chr2 29695430 29695489 -220992365 + L1MC1 LINE L1 5774 5828 -505 2197 131 0 6 chr2 29695489 29695803 -220992051 + AluSx SINE Alu 1 312 0 2735 152 83 25 chr2 29695803 29696270 -220991584 + L1MC1 LINE L1 5828 6331 -2 267 340 11 0 chr2 29697207 29697301 -220990553 + MIR3 SINE MIR 93 187 -21 295 331 33 0 chr2 29698890 29699011 -220988843 - MIR3 SINE MIR -24 184 60 1078 194 97 0 chr2 29699119 29699336 -220988518 - MLT1G1 LTR MaLR 0 595 358 505 183 0 0 chr2 29699386 29699468 -220988386 - AluJb SINE Alu -28 284 203 819 250 57 55 chr2 29699468 29699781 -220988073 - MLT1F1 LTR MaLR -250 280 1 378 280 119 31 chr2 29699874 29700067 -220987787 - MIR SINE MIR -14 248 39 307 319 158 19 chr2 29700357 29700617 -220987237 + L2 LINE L2 2977 3272 0 716 271 19 23 chr2 29700742 29701004 -220986850 - MIR SINE MIR 0 262 2 223 301 132 42 chr2 29701739 29701952 -220985902 - L3 LINE CR1 -7 1570 1339 242 284 0 30 chr2 29702341 29702408 -220985446 + L2 LINE L2 3233 3297 -16 202 270 0 48 chr2 29702408 29702471 -220985383 - L3b LINE CR1 -7 1576 1517 479 252 161 0 chr2 29703159 29703314 -220984540 - MER5A DNA MER1_type 0 189 10 242 313 9 35 chr2 29703348 29703463 -220984391 - MER5A DNA MER1_type -28 161 50 1893 117 4 0 chr2 29703522 29703779 -220984075 - AluSx SINE Alu -19 293 36 868 253 0 5 chr2 29703882 29704068 -220983786 - MER5A DNA MER1_type 0 189 5 1557 136 27 27 chr2 29704890 29705148 -220982706 - MER7C DNA MER2_type -1 602 345 1309 181 0 0 chr2 29705150 29705360 -220982494 + AluJo SINE Alu 1 210 -102 879 59 0 0 chr2 29705400 29705518 -220982336 + (GGAA)n Simple_repeat Simple_repeat 1 118 0 224 292 0 31 chr2 29705522 29705552 -220982302 + GA-rich Low_complexity Low_complexity 3 32 -33 2092 103 0 24 chr2 29705552 29705843 -220982011 + AluSg SINE Alu 1 284 -26 224 292 0 31 chr2 29705843 29705877 -220981977 + GA-rich Low_complexity Low_complexity 32 65 0 2064 140 35 6 chr2 29705877 29706220 -220981634 - MER7C DNA MER2_type -248 354 2 239 167 21 0 chr2 29706728 29706776 -220981078 - MIR SINE MIR -111 151 103 1389 163 139 39 chr2 29706847 29707108 -220980746 + MER47A DNA MER2_type 2 304 -2019 2729 32 3 0 chr2 29707108 29707417 -220980437 - AluY SINE Alu -1 310 1 1389 163 139 39 chr2 29707417 29707486 -220980368 + MER47A DNA MER2_type 304 365 -1 310 327 10 10 chr2 29708823 29708927 -220978927 - MIR3 SINE MIR -93 115 12 1174 195 0 0 chr2 29709271 29709484 -220978370 + AluJo SINE Alu 95 307 0 184 311 44 23 chr2 29710389 29710509 -220977345 - MIR3 SINE MIR -31 231 106 552 306 63 66 chr2 29710870 29711203 -220976651 + L2 LINE L2 2887 3218 -54 583 327 142 13 chr2 29711284 29711299 -220976555 - L2 LINE L2 -2 3311 3299 2203 98 20 14 chr2 29711299 29711596 -220976258 - AluSx SINE Alu -13 299 1 583 327 142 13 chr2 29711596 29712030 -220975824 - L2 LINE L2 -14 3299 2804 447 247 105 6 chr2 29712077 29712233 -220975621 - MIR SINE MIR -32 176 2 406 200 33 0 chr2 29712247 29712337 -220975517 - MER53 DNA DNA -1 188 96 249 57 0 0 chr2 29712355 29712390 -220975464 + (TG)n Simple_repeat Simple_repeat 2 36 0 210 228 53 0 chr2 29712405 29712462 -220975392 - L2 LINE L2 -513 2801 2742 568 206 0 75 chr2 29712462 29712622 -220975232 - MER58C DNA MER1_type 0 215 68 1865 139 7 4 chr2 29712775 29713048 -220974806 - AluSx SINE Alu -7 305 32 234 150 0 0 chr2 29714186 29714226 -220973628 + (CGTG)n Simple_repeat Simple_repeat 4 43 0 264 250 0 0 chr2 29714936 29715000 -220972854 + (CA)n Simple_repeat Simple_repeat 2 65 0 616 275 34 24 chr2 29715040 29715247 -220972607 + MIR SINE MIR 42 250 -12 2497 70 0 3 chr2 29717576 29717878 -220969976 + AluSc SINE Alu 1 301 -8 640 238 48 6 chr2 29717880 29718048 -220969806 + MIR SINE MIR 28 202 -60 568 239 161 0 chr2 29719085 29719265 -220968589 - MER63A DNA MER1_type -1 209 1 207 286 0 0 chr2 29719282 29719345 -220968509 - L2 LINE L2 0 3272 3210 2461 127 77 10 chr2 29719592 29719993 -220967861 + MSTA LTR MaLR 1 428 0 827 171 0 0 chr2 29720251 29720380 -220967474 - FLAM_C SINE Alu -3 130 2 27 0 0 0 chr2 29720405 29720432 -220967422 + AT_rich Low_complexity Low_complexity 1 27 0 834 190 85 35 chr2 29720537 29720737 -220967117 + MER63A DNA MER1_type 1 210 0 307 327 113 6 chr2 29720807 29720975 -220966879 - L1ME LINE L1 -266 5855 5670 243 354 16 8 chr2 29721386 29721513 -220966341 + L2 LINE L2 3137 3264 -8 356 241 139 38 chr2 29721864 29722022 -220965832 - MIR SINE MIR -10 252 79 470 255 0 10 chr2 29722154 29722256 -220965598 - MER81 DNA DNA -13 101 1 27 0 0 0 chr2 29723452 29723479 -220964375 + AT_rich Low_complexity Low_complexity 1 27 0 312 120 0 0 chr2 29723479 29723529 -220964325 + (TG)n Simple_repeat Simple_repeat 1 50 0 2182 144 0 0 chr2 29723591 29723903 -220963951 - AluJb SINE Alu 0 312 1 2178 277 76 33 chr2 29724534 29725602 -220962252 + HAL1 LINE L1 97 1251 -1256 667 169 0 22 chr2 29725641 29725825 -220962029 + (CA)n Simple_repeat Simple_repeat 1 180 0 402 254 0 0 chr2 29725836 29725978 -220961876 + (CA)n Simple_repeat Simple_repeat 2 143 0 2423 234 80 100 chr2 29725978 29726296 -220961558 + HAL1 LINE L1 1261 1584 -923 2373 75 0 19 chr2 29726296 29726603 -220961251 - AluY SINE Alu -10 301 1 2423 234 80 100 chr2 29726603 29727548 -220960306 + HAL1 LINE L1 1584 2499 -8 1359 186 134 3 chr2 29727748 29728003 -220959851 - MER63C DNA MER1_type -713 347 44 189 0 0 0 chr2 29728003 29728024 -220959830 + (CA)n Simple_repeat Simple_repeat 2 22 0 1359 186 134 3 chr2 29728024 29728075 -220959779 - MER63C DNA MER1_type -1016 44 1 215 270 106 74 chr2 29729225 29729414 -220958440 - MIR SINE MIR -48 214 20 300 293 12 0 chr2 29729956 29730038 -220957816 + L3 LINE CR1 1485 1567 -10 191 86 0 29 chr2 29730309 29730344 -220957510 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 589 201 176 25 chr2 29730385 29730589 -220957265 + MIR SINE MIR 15 249 -13 231 36 0 0 chr2 29730995 29731023 -220956831 + (A)n Simple_repeat Simple_repeat 1 28 0 1182 166 0 0 chr2 29731420 29731595 -220956259 + AluJb SINE Alu 137 311 -1 299 298 199 7 chr2 29732433 29732574 -220955280 - MER5A DNA MER1_type -13 176 9 267 295 39 0 chr2 29733272 29733350 -220954504 + (CGTG)n Simple_repeat Simple_repeat 4 84 0 2530 65 0 3 chr2 29733643 29733951 -220953903 + AluY SINE Alu 1 307 -4 241 321 93 29 chr2 29735781 29735921 -220951933 - L2 LINE L2 -1 3271 3123 251 348 30 18 chr2 29738618 29738782 -220949072 + MIR3 SINE MIR 36 201 -7 272 190 13 0 chr2 29738822 29738901 -220948953 + GA-rich Low_complexity Low_complexity 1 80 0 2111 117 4 4 chr2 29739183 29739506 -220948348 + AluSx SINE Alu 1 323 0 423 0 0 0 chr2 29740682 29740729 -220947125 + (CA)n Simple_repeat Simple_repeat 2 48 0 2134 112 0 14 chr2 29741542 29741864 -220945990 - AluY SINE Alu 0 318 1 195 228 0 88 chr2 29742041 29742098 -220945756 - L2 LINE L2 -28 3244 3193 378 42 0 0 chr2 29743785 29743833 -220944021 + (TG)n Simple_repeat Simple_repeat 1 48 0 192 211 96 0 chr2 29743903 29743955 -220943899 - MIR SINE MIR -1 261 205 490 289 70 0 chr2 29744477 29744633 -220943221 - MER5B DNA MER1_type -7 171 5 275 276 46 35 chr2 29744652 29744739 -220943115 + MIR3 SINE MIR 109 196 -12 2216 114 0 0 chr2 29745364 29745653 -220942201 - AluSx SINE Alu -23 289 1 3967 30 9 0 chr2 29745938 29746403 -220941451 + L1PA7 LINE L1 5681 6149 -5 202 216 0 0 chr2 29746504 29746541 -220941313 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 14645 130 33 25 chr2 29747394 29749788 -220938066 - Tigger1 DNA MER2_type -5 2413 1 204 40 0 0 chr2 29749947 29749972 -220937882 + (CA)n Simple_repeat Simple_repeat 2 26 0 689 286 65 74 chr2 29749972 29750420 -220937434 + L1ME4a LINE L1 5367 5810 -311 244 256 12 0 chr2 29750512 29750594 -220937260 + L1ME4a LINE L1 5969 6051 -70 441 169 0 0 chr2 29751725 29751808 -220936046 + (CA)n Simple_repeat Simple_repeat 2 84 0 520 309 20 0 chr2 29752281 29752433 -220935421 + L2 LINE L2 3117 3271 -1 196 121 0 0 chr2 29752520 29752553 -220935301 + L2 LINE L2 3271 3303 -10 6792 50 28 2 chr2 29953574 29954985 -220732869 - L1PA7 LINE L1 -13 6141 4748 1263 150 106 0 chr2 29956583 29956829 -220731025 + L1MA4 LINE L1 6017 6288 -12 22 35 0 0 chr2 29957166 29957195 -220730659 + AT_rich Low_complexity Low_complexity 1 29 0 362 271 0 9 chr2 29957357 29957464 -220730390 + L2 LINE L2 2192 2297 -1017 316 309 87 20 chr2 29957518 29957667 -220730187 + MLT1J LTR MaLR 7 165 -346 756 324 8 12 chr2 29957707 29957957 -220729897 + MLT1J LTR MaLR 254 502 -9 25 0 0 0 chr2 29958134 29958159 -220729695 + AT_rich Low_complexity Low_complexity 1 25 0 239 355 0 0 chr2 29958159 29958235 -220729619 + MIR SINE MIR 40 115 -93 700 339 33 0 chr2 29958239 29958481 -220729373 + MIR SINE MIR 12 261 -1 298 333 74 24 chr2 29959034 29959231 -220728623 + MIR SINE MIR 1 203 -59 626 256 99 29 chr2 29959755 29959997 -220727857 + MIR SINE MIR 4 262 0 193 378 37 0 chr2 29959999 29960081 -220727773 + MIR SINE MIR 64 148 -114 346 312 110 23 chr2 29961949 29962122 -220725732 - MER5A DNA MER1_type -1 188 1 21 0 0 0 chr2 29964019 29964040 -220723814 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 29964352 29964390 -220723464 + AT_rich Low_complexity Low_complexity 1 38 0 344 387 7 14 chr2 29964443 29964585 -220723269 - MIR3 SINE MIR -28 180 40 2263 42 0 0 chr2 29968329 29968591 -220719263 - AluY SINE Alu -16 295 34 691 333 93 30 chr2 29969932 29970392 -220717462 + L2 LINE L2 2825 3313 0 757 306 35 23 chr2 29970488 29970746 -220717108 - MIR SINE MIR -1 261 1 1780 139 10 45 chr2 29970979 29971267 -220716587 - AluSx SINE Alu -34 278 1 2311 93 0 3 chr2 29971539 29971851 -220716003 + AluY SINE Alu 1 311 0 202 372 32 21 chr2 29971858 29971952 -220715902 + L2 LINE L2 3151 3245 -27 7167 57 0 3 chr2 29972611 29973696 -220714158 - L1PA6 LINE L1 0 6154 5071 2174 48 0 0 chr2 29973697 29973967 -220713887 + L1PA6 LINE L1 4799 5068 -1078 261 0 0 0 chr2 29974005 29974034 -220713820 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 894 94 0 51 chr2 29974060 29974198 -220713656 - FLAM_C SINE Alu -1 132 2 27 62 0 0 chr2 29974367 29974415 -220713439 + AT_rich Low_complexity Low_complexity 1 48 0 2218 109 20 3 chr2 29974549 29974909 -220712945 + AluSx SINE Alu 3 367 0 368 315 28 0 chr2 29975303 29975411 -220712443 + L2 LINE L2 3203 3313 0 412 226 17 17 chr2 29976195 29976310 -220711544 + L1MC5 LINE L1 7810 7924 -37 578 310 114 41 chr2 29976559 29976927 -220710927 + MLT1L LTR MaLR 126 520 -95 37 39 0 0 chr2 29976938 29976989 -220710865 + AT_rich Low_complexity Low_complexity 1 51 0 2471 83 3 0 chr2 29977333 29977645 -220710209 + AluSp SINE Alu 1 313 0 2061 123 13 7 chr2 29978161 29978471 -220709383 - AluSq SINE Alu -1 312 1 2262 94 3 7 chr2 29978480 29978787 -220709067 - AluY SINE Alu -5 306 1 244 290 0 54 chr2 29979838 29979931 -220707923 - L2 LINE L2 -55 3258 3171 448 250 113 86 chr2 29980177 29980268 -220707586 - LTR33 LTR ERVL -246 275 188 2591 39 0 13 chr2 29980268 29980579 -220707275 - AluY SINE Alu -1 310 4 448 250 113 86 chr2 29980579 29980743 -220707111 - LTR33 LTR ERVL -333 188 13 1676 185 4 0 chr2 29980882 29981211 -220706643 - AluJb SINE Alu 0 330 1 2128 110 7 3 chr2 29982101 29982402 -220705452 + AluSx SINE Alu 1 302 -10 257 350 43 8 chr2 29982512 29982629 -220705225 - L2 LINE L2 -16 3297 3177 848 231 0 0 chr2 29983755 29983915 -220703939 + MER5B DNA MER1_type 1 160 -18 279 256 154 0 chr2 29984034 29984151 -220703703 + L1ME4a LINE L1 5588 5722 -399 330 286 95 49 chr2 29984172 29984476 -220703378 + L1ME4a LINE L1 5789 6106 -15 336 328 16 32 chr2 29984531 29984656 -220703198 + L2 LINE L2 3150 3272 0 314 321 7 29 chr2 29984661 29984801 -220703053 + L2 LINE L2 2626 2762 -552 210 351 79 40 chr2 29984852 29985054 -220702800 + L2 LINE L2 2871 3080 -192 245 104 62 0 chr2 29985083 29985131 -220702723 + (TTATA)n Simple_repeat Simple_repeat 3 53 0 207 72 21 93 chr2 29985146 29985243 -220702611 + (TTA)n Simple_repeat Simple_repeat 1 90 0 254 277 121 0 chr2 29985257 29985340 -220702514 - MER87 LTR ERV1 -72 469 377 40036 71 13 2 chr2 29985575 29991659 -220696195 - L1PA6 LINE L1 -2 6152 4 30 45 0 0 chr2 29991661 29991705 -220696149 + AT_rich Low_complexity Low_complexity 1 44 0 449 336 43 17 chr2 29991849 29992081 -220695773 + L2 LINE L2 2649 2886 -428 21 0 0 0 chr2 29992567 29992588 -220695266 + AT_rich Low_complexity Low_complexity 1 21 0 2018 118 3 38 chr2 29992591 29992905 -220694949 + AluSq SINE Alu 1 303 -10 2276 101 0 7 chr2 29993037 29993335 -220694519 + AluSc SINE Alu 1 296 -13 30 0 0 0 chr2 29993805 29993835 -220694019 + AT_rich Low_complexity Low_complexity 1 30 0 243 208 69 14 chr2 29994269 29994341 -220693513 + L1MEd LINE L1 1142 1217 -4902 * 285 311 105 22 chr2 29994310 29994538 -220693316 + HAL1 LINE L1 1282 1528 -962 324 0 0 0 chr2 29994561 29994597 -220693257 + (TA)n Simple_repeat Simple_repeat 1 36 0 1263 157 108 18 chr2 29994765 29995204 -220692650 - MER21B LTR ERV1 -364 499 1 19455 178 29 18 chr2 29995204 29998851 -220689003 - MER21A-int LTR ERV1 0 4191 506 319 159 48 0 chr2 29998851 29998914 -220688940 - MER50 LTR ERV1 -23 711 646 * 2869 155 19 4 chr2 29998912 29999376 -220688478 - MER50 LTR ERV1 -263 471 1 3080 156 18 12 chr2 29999376 29999882 -220687972 - MER21A-int LTR ERV1 -3682 509 1 2729 169 41 35 chr2 29999882 30000266 -220687588 - MER21A LTR ERV1 0 931 542 2044 148 0 3 chr2 30000266 30000571 -220687283 + AluSx SINE Alu 1 304 -8 2729 169 41 35 chr2 30000571 30000700 -220687154 - MER21A LTR ERV1 -389 542 415 25 51 0 0 chr2 30001009 30001048 -220686806 + AT_rich Low_complexity Low_complexity 1 39 0 1830 175 0 0 chr2 30001900 30002197 -220685657 - AluSx SINE Alu -15 297 1 2366 99 0 3 chr2 30002351 30002663 -220685191 + AluSq SINE Alu 1 311 -2 261 308 13 0 chr2 30003498 30003576 -220684278 + MIR SINE MIR 74 152 -110 2818 123 25 7 chr2 30003676 30004108 -220683746 - MER4C LTR ERV1 -25 440 1 4303 92 82 8 chr2 30004512 30005112 -220682742 + LTR9B LTR ERV1 1 644 0 2343 99 0 0 chr2 30006234 30006537 -220681317 + AluSq SINE Alu 1 303 -10 2147 132 0 0 chr2 30006723 30007027 -220680827 - AluSx SINE Alu -8 304 1 318 259 172 0 chr2 30007028 30007144 -220680710 - MIR SINE MIR -45 217 82 1843 154 28 0 chr2 30007148 30007434 -220680420 + AluJo SINE Alu 1 294 -18 2220 90 3 7 chr2 30007438 30007728 -220680126 + AluSg SINE Alu 1 289 -21 28 29 0 0 chr2 30008305 30008340 -220679514 + AT_rich Low_complexity Low_complexity 1 35 0 231 227 0 53 chr2 30008389 30008464 -220679390 - MLT1J2 LTR MaLR 0 450 380 1628 128 31 0 chr2 30008554 30008811 -220679043 + L1MA5A LINE L1 6008 6272 -25 465 274 86 35 chr2 30008825 30009022 -220678832 - MLT1J1 LTR MaLR -243 207 1 268 229 36 48 chr2 30010301 30010384 -220677470 - MLT1J1 LTR MaLR 0 446 365 236 345 36 14 chr2 30010541 30010680 -220677174 + MIR SINE MIR 34 175 -87 821 279 60 97 chr2 30010707 30011241 -220676613 - LTR67 LTR ERVL -2 555 42 708 178 16 31 chr2 30011368 30011490 -220676364 + FLAM_A SINE Alu 5 126 -176 207 0 0 0 chr2 30011490 30011513 -220676341 + (TTAAA)n Simple_repeat Simple_repeat 2 24 0 264 62 0 0 chr2 30011581 30011613 -220676241 + U2 snRNA snRNA 5 36 -152 27 22 0 22 chr2 30011629 30011640 -220676214 + AT_rich Low_complexity Low_complexity 1 11 -33 2382 60 0 23 chr2 30011640 30011941 -220675913 - AluY SINE Alu -17 294 1 27 22 0 22 chr2 30011941 30011974 -220675880 + AT_rich Low_complexity Low_complexity 11 44 0 180 0 0 0 chr2 30012365 30012385 -220675469 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 2153 119 3 6 chr2 30012512 30012823 -220675031 + AluSx SINE Alu 1 310 -2 464 306 174 30 chr2 30014322 30014787 -220673067 - L1ME2 LINE L1 -293 5871 5337 264 218 59 59 chr2 30014977 30015079 -220672775 - MLT1H1 LTR MaLR -15 540 283 228 351 88 6 chr2 30016056 30016227 -220671627 - HAL1 LINE L1 -769 1738 1554 1170 229 108 16 chr2 30016250 30016565 -220671289 - MER2 DNA MER2_type 0 344 1 27 49 0 0 chr2 30017687 30017728 -220670126 + AT_rich Low_complexity Low_complexity 1 41 0 806 195 69 19 chr2 30018500 30018659 -220669195 - FRAM SINE Alu -4 172 6 1054 88 0 7 chr2 30019212 30019348 -220668506 + AluSq/x SINE Alu 1 135 -177 2275 93 0 16 chr2 30019348 30019658 -220668196 + AluSx SINE Alu 1 305 -7 1954 121 10 7 chr2 30019900 30020198 -220667656 + AluSx SINE Alu 1 299 -13 382 270 0 0 chr2 30020337 30020426 -220667428 + L1ME LINE L1 5531 5619 -502 250 247 49 25 chr2 30020568 30020649 -220667205 + LTR67 LTR ERVL 96 178 -379 1985 112 24 17 chr2 30022131 30022418 -220665436 + AluSx SINE Alu 1 289 -23 250 246 31 0 chr2 30022431 30022496 -220665358 + MIR SINE MIR 138 204 -58 1998 177 18 24 chr2 30022641 30022980 -220664874 - MER1B DNA MER1_type 0 337 1 2206 108 0 0 chr2 30022990 30023285 -220664569 - AluSg1 SINE Alu -14 295 1 22 56 0 0 chr2 30023629 30023665 -220664189 + AT_rich Low_complexity Low_complexity 1 36 0 398 263 116 66 chr2 30023687 30023885 -220663969 - MIR SINE MIR -27 235 28 2159 138 0 0 chr2 30024003 30024315 -220663539 - AluSx SINE Alu 0 312 1 2069 94 45 7 chr2 30024327 30024615 -220663239 - AluSp SINE Alu -14 299 1 1317 189 124 4 chr2 30024618 30024877 -220662977 - AluJo SINE Alu -8 294 5 340 323 30 8 chr2 30024883 30025016 -220662838 + MER5A DNA MER1_type 54 189 0 225 170 213 0 chr2 30025889 30025936 -220661918 - MIR SINE MIR -65 143 87 1682 171 0 49 chr2 30025975 30026188 -220661666 - AluJb SINE Alu 0 312 119 3323 98 50 25 chr2 30026188 30026668 -220661186 - LTR22B LTR ERVK 0 492 1 1682 171 0 49 chr2 30026668 30026782 -220661072 - AluJb SINE Alu -193 119 1 1866 141 63 167 chr2 30027040 30027259 -220660595 - LTR36 LTR ERV1 0 611 371 1611 109 5 9 chr2 30027259 30027479 -220660375 - L1PA8A LINE L1 0 6131 5913 1866 141 63 167 chr2 30027479 30027857 -220659997 - LTR36 LTR ERV1 -240 371 76 1982 125 65 46 chr2 30027857 30028225 -220659629 - THE1C LTR MaLR 0 375 1 9390 150 4 48 chr2 30028225 30029505 -220658349 - THE1C-int LTR MaLR 0 1580 387 2283 98 0 7 chr2 30029505 30029802 -220658052 + AluY SINE Alu 1 295 -16 9390 150 4 48 chr2 30029802 30030170 -220657684 - THE1C-int LTR MaLR -1193 387 4 1586 146 68 89 chr2 30030173 30030556 -220657298 - THE1C LTR MaLR 0 375 1 445 73 12 61 chr2 30030557 30030639 -220657215 - LTR36 LTR ERV1 -533 78 1 296 319 178 0 chr2 30031019 30031182 -220656672 - L2 LINE L2 -948 2366 2175 1804 205 22 64 chr2 30031941 30032395 -220655459 - MER63B DNA MER1_type -1 435 1 962 192 15 30 chr2 30032619 30032817 -220655037 + MLT1A1 LTR MaLR 1 195 -170 633 204 0 0 chr2 30032873 30032981 -220654873 - FRAM SINE Alu -5 171 64 998 217 0 39 chr2 30033037 30033267 -220654587 - AluJo SINE Alu -17 295 75 1188 126 6 0 chr2 30033303 30033477 -220654377 - MER4A LTR ERV1 -489 175 1 363 296 32 65 chr2 30033574 30033760 -220654094 - MIR SINE MIR -80 182 3 180 0 0 0 chr2 30034093 30034113 -220653741 + (TGG)n Simple_repeat Simple_repeat 1 20 0 409 167 132 35 chr2 30034956 30035070 -220652784 - LTR33 LTR ERVL 0 521 397 1561 210 10 62 chr2 30035084 30035474 -220652380 - MLT1A2 LTR MaLR -4 370 1 393 299 96 37 chr2 30035477 30035664 -220652190 - LTR33 LTR ERVL -165 356 159 1816 125 18 11 chr2 30035809 30036115 -220651739 + AluSx SINE Alu 1 308 0 2179 114 3 3 chr2 30036165 30036463 -220651391 + AluSx SINE Alu 1 298 -14 649 228 96 96 chr2 30036565 30036929 -220650925 + Charlie8 DNA MER1_type 1889 2252 -165 1876 202 27 60 chr2 30037106 30037306 -220650548 - MER31B LTR ERV1 0 466 261 1074 241 103 57 chr2 30037306 30037355 -220650499 - MLT1A1 LTR MaLR 0 365 320 2199 99 3 3 chr2 30037355 30037675 -220650179 - AluSx SINE Alu 0 320 1 1074 241 103 57 chr2 30037675 30037973 -220649881 - MLT1A1 LTR MaLR -45 320 1 1876 202 27 60 chr2 30037973 30038252 -220649602 - MER31B LTR ERV1 -205 261 3 860 204 183 11 chr2 30038252 30038526 -220649328 - L1ME1 LINE L1 -80 6086 5766 2762 211 84 52 chr2 30038530 30038688 -220649166 - L1ME1 LINE L1 -524 5640 5488 1715 177 13 7 chr2 30038688 30038993 -220648861 - AluJb SINE Alu -2 310 4 2762 211 84 52 chr2 30038993 30039909 -220647945 - L1ME1 LINE L1 -676 5488 4539 2449 165 14 32 chr2 30040067 30040411 -220647443 - L1MB1 LINE L1 -1 6167 5831 1862 158 7 3 chr2 30040411 30040721 -220647133 - AluSx SINE Alu -1 311 1 2449 165 14 32 chr2 30040721 30040819 -220647035 - L1MB1 LINE L1 -337 5831 5733 1216 160 41 37 chr2 30040819 30041055 -220646799 + L1MB1 LINE L1 5481 5720 -614 350 294 96 23 chr2 30041295 30041472 -220646382 - MIR SINE MIR -68 194 5 1701 175 0 14 chr2 30041607 30041904 -220645950 - AluJb SINE Alu -19 293 1 1153 100 18 12 chr2 30042126 30042296 -220645558 - MER4B LTR ERV1 0 610 440 320 83 150 17 chr2 30042290 30042350 -220645504 - MER4A LTR ERV1 -596 68 1 * 452 236 24 16 chr2 30042355 30042482 -220645372 - L1MC5 LINE L1 -105 7856 7729 2080 113 11 3 chr2 30042501 30042785 -220645069 - AluSx SINE Alu -26 286 1 209 83 28 0 chr2 30042897 30042933 -220644921 + (TG)n Simple_repeat Simple_repeat 2 38 0 1387 143 37 82 chr2 30042985 30043279 -220644575 + AluJo SINE Alu 11 291 -21 313 149 6 23 chr2 30043617 30043692 -220644162 + AluSc SINE Alu 1 39 -260 1642 77 5 0 chr2 30043692 30043901 -220643953 + AluSc SINE Alu 84 293 -16 183 80 0 0 chr2 30044631 30044656 -220643198 + (CGG)n Simple_repeat Simple_repeat 3 27 0 290 282 220 48 chr2 30045349 30045576 -220642278 + L3 LINE CR1 1299 1564 -13 22 56 0 0 chr2 30046423 30046459 -220641395 + AT_rich Low_complexity Low_complexity 1 36 0 196 286 0 0 chr2 30047263 30047312 -220640542 + L2 LINE L2 3149 3197 -75 2645 187 30 31 chr2 30047477 30048017 -220639837 - MER44D DNA MER2_type -11 594 1 1385 160 94 0 chr2 30048048 30048292 -220639562 - AluJb SINE Alu -45 267 1 241 136 0 0 chr2 30048313 30048357 -220639497 - LTR66 LTR ERVL -173 437 394 898 186 167 0 chr2 30048400 30048604 -220639250 - Tigger3(Golem) DNA MER2_type -1 3028 2791 31 26 0 0 chr2 30048990 30049028 -220638826 + AT_rich Low_complexity Low_complexity 1 38 0 1675 173 25 7 chr2 30049395 30049672 -220638182 - AluJb SINE Alu -30 282 1 410 250 50 43 chr2 30049861 30050001 -220637853 + Charlie8 DNA MER1_type 87 227 -2190 24 41 0 20 chr2 30050632 30050650 -220637204 + AT_rich Low_complexity Low_complexity 1 18 -30 1612 103 22 9 chr2 30050650 30050882 -220636972 + AluSq SINE Alu 63 297 -16 24 41 0 20 chr2 30050882 30050912 -220636942 + AT_rich Low_complexity Low_complexity 18 48 0 2224 94 0 16 chr2 30050924 30051232 -220636622 + AluSx SINE Alu 1 303 -9 355 266 201 32 chr2 30052035 30052189 -220635665 + MLT1G LTR MaLR 208 387 -203 180 0 0 0 chr2 30052190 30052210 -220635644 + (CCCCAG)n Simple_repeat Simple_repeat 4 23 0 292 202 263 18 chr2 30052220 30052334 -220635520 + MLT1G LTR MaLR 414 590 0 667 213 142 11 chr2 30052750 30052933 -220634921 - MER58C DNA MER1_type 0 215 9 1895 216 168 26 chr2 30054691 30055333 -220632521 - L1MC4 LINE L1 -7 8035 7303 1771 151 4 4 chr2 30055585 30055857 -220631997 - AluSx SINE Alu -40 272 1 21 0 0 0 chr2 30056016 30056037 -220631817 + AT_rich Low_complexity Low_complexity 1 21 0 477 231 0 0 chr2 30057116 30057263 -220630591 + GA-rich Low_complexity Low_complexity 1 147 0 254 105 11 84 chr2 30058373 30058468 -220629386 + (TA)n Simple_repeat Simple_repeat 1 88 0 27 29 0 0 chr2 30058606 30058640 -220629214 + AT_rich Low_complexity Low_complexity 1 34 0 222 222 44 0 chr2 30058805 30058850 -220629004 - MER5A DNA MER1_type -102 87 41 823 154 0 0 chr2 30059491 30059621 -220628233 - FLAM_C SINE Alu -3 130 1 444 315 77 40 chr2 30059850 30060072 -220627782 + MIR SINE MIR 33 262 0 263 191 16 0 chr2 30061798 30061861 -220625993 + (TATG)n Simple_repeat Simple_repeat 3 66 0 1329 131 34 0 chr2 30063171 30063377 -220624477 - MER2 DNA MER2_type -132 213 1 1505 185 82 27 chr2 30065313 30065643 -220622211 + MER7A DNA MER2_type 1 346 0 189 241 56 19 chr2 30066555 30066609 -220621245 + MIR SINE MIR 90 145 -63 21 36 0 0 chr2 30066708 30066736 -220621118 + AT_rich Low_complexity Low_complexity 1 28 0 367 267 56 0 chr2 30066771 30066861 -220620993 + MER5A DNA MER1_type 7 101 -88 1078 68 0 0 chr2 30067106 30067239 -220620615 - AluSp/q SINE Alu -10 303 171 2062 132 0 0 chr2 30067339 30067620 -220620234 - AluSx SINE Alu -31 281 1 878 257 79 13 chr2 30067631 30068145 -220619709 - L1M4b LINE L1 -3662 3903 3358 1793 228 39 22 chr2 30069820 30070390 -220617464 - L1M4b LINE L1 -5610 1857 1241 969 318 86 29 chr2 30070472 30070915 -220616939 - L1M4b LINE L1 -6383 1084 617 315 142 7 0 chr2 30071318 30071393 -220616461 - Alu SINE Alu -260 39 1 1385 151 36 79 chr2 30071732 30072036 -220615818 - AluJo SINE Alu -11 291 1 433 208 18 86 chr2 30072232 30072453 -220615401 + AluSx SINE Alu 3 208 -104 3273 65 0 0 chr2 30072557 30072974 -220614880 + L1PA5 LINE L1 5738 6154 0 196 300 43 29 chr2 30073633 30073703 -220614151 - L2 LINE L2 -27 3245 3175 925 195 0 14 chr2 30073735 30073945 -220613909 - AluY SINE Alu -1 310 104 4277 228 71 16 chr2 30074110 30075526 -220612328 - L1 LINE L1 -1486 4660 3168 239 233 96 0 chr2 30075539 30075612 -220612242 - L1 LINE L1 -3006 3140 3061 * 324 234 66 29 chr2 30075596 30075768 -220612086 - L1 LINE L1 -3427 2719 2537 1732 131 24 23 chr2 30075991 30076328 -220611526 - MER4A LTR ERV1 -6 658 263 520 134 31 21 chr2 30076328 30076425 -220611429 - MER4A LTR ERV1 -566 98 1 1912 168 37 59 chr2 30076458 30077004 -220610850 - MER4B LTR ERV1 -4 706 195 364 303 3 31 chr2 30077158 30077343 -220610511 + C-rich Low_complexity Low_complexity 1 179 0 1302 236 0 0 chr2 30077972 30078260 -220609594 + AluSx SINE Alu 6 293 -19 610 194 30 37 chr2 30079175 30079309 -220608545 + FLAM_C SINE Alu 1 133 0 24 53 0 0 chr2 30080038 30080076 -220607778 + AT_rich Low_complexity Low_complexity 1 38 0 31 0 0 0 chr2 30081223 30081254 -220606600 + AT_rich Low_complexity Low_complexity 1 31 0 909 138 7 0 chr2 30081274 30081412 -220606442 - AluSq/x SINE Alu -173 139 1 22 0 0 0 chr2 30084780 30084802 -220603052 + AT_rich Low_complexity Low_complexity 1 22 0 2076 94 0 34 chr2 30086450 30086747 -220601107 + AluSx SINE Alu 1 287 -25 248 299 52 10 chr2 30086880 30086977 -220600877 + MIR SINE MIR 41 141 -121 305 333 8 8 chr2 30087008 30087125 -220600729 - L2 LINE L2 -14 3299 3183 25 0 0 0 chr2 30087511 30087536 -220600318 + AT_rich Low_complexity Low_complexity 1 25 0 1624 176 32 0 chr2 30087623 30087907 -220599947 - AluJo SINE Alu -19 293 1 973 248 32 16 chr2 30087935 30088181 -220599673 + MIR SINE MIR 10 259 -3 33 25 0 0 chr2 30090426 30090466 -220597388 + AT_rich Low_complexity Low_complexity 1 40 0 244 281 8 8 chr2 30090612 30090733 -220597121 + (CAGAGA)n Simple_repeat Simple_repeat 5 125 0 229 314 116 33 chr2 30092346 30092467 -220595387 + MIR3 SINE MIR 42 172 -36 258 261 29 0 chr2 30092602 30092671 -220595183 - MIR SINE MIR -143 119 49 1570 114 134 4 chr2 30092738 30092992 -220594862 - AluSx SINE Alu -25 287 1 192 297 122 0 chr2 30093114 30093188 -220594666 - MIR SINE MIR -3 259 177 2166 130 0 0 chr2 30094599 30094898 -220592956 + AluSx SINE Alu 1 299 -13 1245 240 79 14 chr2 30094970 30095538 -220592316 + L1MA9 LINE L1 3318 3948 -3617 2285 120 0 0 chr2 30095538 30095838 -220592016 + AluSx SINE Alu 1 300 -12 1245 240 79 14 chr2 30095838 30096034 -220591820 + L1MA9 LINE L1 3948 4130 -3435 * 7216 212 55 20 chr2 30096029 30098659 -220589195 + L1MA9 LINE L1 4480 7234 -497 243 0 0 0 chr2 30098659 30098686 -220589168 + (TG)n Simple_repeat Simple_repeat 2 28 0 7216 212 55 20 chr2 30098686 30099076 -220588778 + L1MA9 LINE L1 7234 7609 -122 265 306 125 25 chr2 30100685 30101012 -220586842 - L1P LINE L1 -5783 363 4 29 28 0 0 chr2 30101022 30101058 -220586796 + AT_rich Low_complexity Low_complexity 1 36 0 437 340 43 17 chr2 30101202 30101434 -220586420 + L2 LINE L2 2649 2886 -428 21 0 0 0 chr2 30101920 30101941 -220585913 + AT_rich Low_complexity Low_complexity 1 21 0 1958 127 3 38 chr2 30101944 30102258 -220585596 + AluSq SINE Alu 1 303 -10 2291 101 0 7 chr2 30102390 30102688 -220585166 + AluSc SINE Alu 1 296 -13 30 0 0 0 chr2 30103158 30103188 -220584666 + AT_rich Low_complexity Low_complexity 1 30 0 233 206 32 16 chr2 30103631 30103694 -220584160 + L1MEd LINE L1 1154 1217 -4902 244 217 0 33 chr2 30104763 30104855 -220582999 - L1MC4 LINE L1 -1340 6702 6614 241 222 40 20 chr2 30104790 30104889 -220582965 + L1MC4 LINE L1 6614 6714 -1328 * 22 0 0 0 chr2 30104979 30105001 -220582853 + AT_rich Low_complexity Low_complexity 1 22 0 334 292 97 26 chr2 30105468 30105622 -220582232 + MIR SINE MIR 58 222 -40 219 170 0 0 chr2 30107011 30107058 -220580796 + (TG)n Simple_repeat Simple_repeat 2 48 0 558 259 54 54 chr2 30107204 30107428 -220580426 + Charlie8 DNA MER1_type 37 260 -2157 2528 70 0 3 chr2 30107460 30107772 -220580082 - AluY SINE Alu 0 311 1 3207 79 41 48 chr2 30108256 30108491 -220579363 + LTR10D LTR ERV1 1 236 -277 2309 63 40 3 chr2 30108491 30108791 -220579063 - AluY SINE Alu 0 311 1 3207 79 41 48 chr2 30108791 30109072 -220578782 + LTR10D LTR ERV1 236 513 0 2032 135 6 10 chr2 30109298 30109609 -220578245 - AluSx SINE Alu -2 310 1 2161 113 0 7 chr2 30109630 30109922 -220577932 - AluSx SINE Alu -22 290 1 1336 139 129 82 chr2 30110509 30110803 -220577051 + AluSx SINE Alu 1 308 -4 278 286 29 0 chr2 30111000 30111070 -220576784 + L2 LINE L2 3242 3313 0 1680 139 20 22 chr2 30111584 30111930 -220575924 - MER4A LTR ERV1 0 664 261 465 186 21 10 chr2 30111930 30112027 -220575827 - MER4A LTR ERV1 -566 98 1 3897 125 52 16 chr2 30112035 30112746 -220575108 - MER4A-int LTR ERV1 -2 6596 5860 543 169 131 0 chr2 30112746 30112876 -220574978 + LTR8 LTR ERV1 111 257 -434 7447 112 51 35 chr2 30112876 30112899 -220574955 - LTR7-int LTR ERV1 -4103 2495 2474 1930 164 0 0 chr2 30112899 30113197 -220574657 + AluSx SINE Alu 1 298 -14 1918 132 6 52 chr2 30113197 30113523 -220574331 + AluY SINE Alu 1 311 0 7447 112 51 35 chr2 30113523 30114517 -220573337 - LTR7-int LTR ERV1 -4124 2474 1443 2542 78 125 5 chr2 30114517 30114917 -220572937 + LTR7 LTR ERV1 1 448 -2 7447 112 51 35 chr2 30114917 30115375 -220572479 - LTR7-int LTR ERV1 -5155 1443 994 343 164 0 0 chr2 30115369 30115424 -220572430 - LTR7-int LTR ERV1 -5706 892 838 * 207 114 0 0 chr2 30115514 30115549 -220572305 + (TTG)n Simple_repeat Simple_repeat 3 37 0 2370 98 52 34 chr2 30115551 30115825 -220572029 - LTR7-int LTR ERV1 -5782 816 549 2534 79 122 10 chr2 30115825 30116228 -220571626 - LTR7 LTR ERV1 -2 448 1 2370 98 52 34 chr2 30116228 30116314 -220571540 - LTR7-int LTR ERV1 -6049 549 466 2172 136 3 0 chr2 30116314 30116623 -220571231 + AluSx SINE Alu 1 310 -2 2370 98 52 34 chr2 30116623 30116942 -220570912 - LTR7-int LTR ERV1 -6132 466 1 1632 131 24 23 chr2 30116953 30117290 -220570564 - MER4A LTR ERV1 -6 658 263 449 135 42 21 chr2 30117290 30117386 -220570468 - MER4A LTR ERV1 -566 98 1 3684 144 57 52 chr2 30117419 30118084 -220569770 - MER4D LTR ERV1 -4 830 196 2345 62 3 39 chr2 30118084 30118391 -220569463 - AluSg1 SINE Alu -13 296 1 3684 144 57 52 chr2 30118391 30118588 -220569266 - MER4D LTR ERV1 -638 196 1 231 146 0 0 chr2 30118839 30118880 -220568974 + (TA)n Simple_repeat Simple_repeat 2 42 0 2118 120 0 0 chr2 30118882 30119156 -220568698 - AluSx SINE Alu -38 274 1 2172 131 0 0 chr2 30119609 30119907 -220567947 + AluSx SINE Alu 1 298 -14 25 31 0 0 chr2 30119948 30119980 -220567874 + AT_rich Low_complexity Low_complexity 1 32 0 209 224 0 41 chr2 30120866 30120915 -220566939 + GA-rich Low_complexity Low_complexity 2 48 0 2080 126 3 10 chr2 30121979 30122281 -220565573 + AluSc SINE Alu 1 300 -9 821 138 14 0 chr2 30122281 30122419 -220565435 + GA-rich Low_complexity Low_complexity 1 140 0 1760 193 0 13 chr2 30122614 30122930 -220564924 - AluJo SINE Alu 0 312 1 197 343 105 91 chr2 30122938 30123224 -220564630 + L2 LINE L2 2576 2865 -449 22 35 0 0 chr2 30124114 30124143 -220563711 + AT_rich Low_complexity Low_complexity 1 29 0 2761 186 31 31 chr2 30126400 30126454 -220561400 - L1MB8 LINE L1 -7 6171 6118 1771 127 123 27 chr2 30126454 30126786 -220561068 - THE1B LTR MaLR 0 364 1 2761 186 31 31 chr2 30126786 30127415 -220560439 - L1MB8 LINE L1 -59 6119 5488 1200 230 36 18 chr2 30127428 30127819 -220560035 - L1MB8 LINE L1 -1228 4918 4521 919 164 11 0 chr2 30127846 30128029 -220559825 + L1 LINE L1 4494 4678 -1468 5633 123 19 1 chr2 30128078 30129315 -220558539 + L1PA15 LINE L1 4909 6165 0 806 158 13 0 chr2 30129322 30129474 -220558380 + MER41B LTR ERV1 480 633 -2 2493 150 16 14 chr2 30129474 30129913 -220557941 + MER41B-int LTR ERV1 13 452 -5494 3997 137 28 20 chr2 30130045 30130729 -220557125 + MER41-int LTR ERV1 2 690 -5256 2171 121 51 19 chr2 30130729 30131101 -220556753 + MER41-int LTR ERV1 1392 1775 -4171 576 164 21 0 chr2 30131080 30131194 -220556660 + MER41-int LTR ERV1 944 1059 -4158 * 3267 144 94 7 chr2 30131200 30131795 -220556059 + MER41-int LTR ERV1 2166 2812 -3134 2526 49 0 10 chr2 30132124 30132431 -220555423 + AluY SINE Alu 1 304 -7 799 183 114 121 chr2 30132802 30133233 -220554621 - MLT1A1 LTR MaLR 0 365 1 721 203 0 0 chr2 30133731 30133869 -220553985 + MLT1A2 LTR MaLR 237 374 0 25 51 0 0 chr2 30134400 30134439 -220553415 + AT_rich Low_complexity Low_complexity 1 39 0 1537 128 4 0 chr2 30135035 30135270 -220552584 - L1P4 LINE L1 -505 5661 5426 732 154 16 0 chr2 30135267 30135390 -220552464 + L1P LINE L1 4869 4993 -1153 * 237 267 23 92 chr2 30135390 30135521 -220552333 + MLT1D LTR MaLR 126 247 -258 1235 118 0 0 chr2 30135550 30135745 -220552109 - L1MA3 LINE L1 -1 6304 6110 1726 186 3 7 chr2 30135748 30136066 -220551788 - AluJb SINE Alu 0 312 6 421 274 93 101 chr2 30136918 30137166 -220550688 + MIR SINE MIR 17 262 0 397 315 34 40 chr2 30137390 30137539 -220550315 + L2 LINE L2 3125 3272 0 2100 118 0 3 chr2 30137590 30137886 -220549968 - AluSq SINE Alu -18 295 1 22 70 0 0 chr2 30138125 30138168 -220549686 + AT_rich Low_complexity Low_complexity 1 43 0 268 242 27 108 chr2 30138211 30138367 -220549487 - L1MEc LINE L1 -4314 2249 2115 883 124 0 0 chr2 30138367 30138504 -220549350 - L1MA3 LINE L1 -8 6297 6161 268 242 27 108 chr2 30138504 30138570 -220549284 - L1MEc LINE L1 -4448 2115 2045 324 137 0 0 chr2 30138676 30138727 -220549127 - U5 snRNA snRNA -65 51 1 603 294 52 38 chr2 30138945 30139289 -220548565 - L1MEc LINE L1 -4543 1841 1493 1441 254 98 50 chr2 30139390 30140311 -220547543 + L1M4 LINE L1 3826 4790 -1356 421 259 60 46 chr2 30140349 30140565 -220547289 + L1M4 LINE L1 4961 5179 -967 456 301 36 6 chr2 30140579 30140745 -220547109 + L1ME LINE L1 12 182 -5888 635 279 92 67 chr2 30140755 30141235 -220546619 + L1M4 LINE L1 4201 4692 -1454 9012 111 22 6 chr2 30141335 30142704 -220545150 - MER41-int LTR ERV1 -509 5437 4047 365 149 27 27 chr2 30142804 30142888 -220544966 - AluS SINE Alu -241 59 1 1700 184 16 10 chr2 30144338 30144647 -220543207 + AluSx SINE Alu 1 311 -1 678 53 53 29 chr2 30144817 30144987 -220542867 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 313 250 206 0 chr2 30145127 30145219 -220542635 + L2 LINE L2 3201 3311 -2 403 271 13 66 chr2 30146082 30146233 -220541621 - MIR SINE MIR -56 206 64 1794 185 20 58 chr2 30147061 30147461 -220540393 - LTR8 LTR ERV1 -291 400 16 354 356 67 0 chr2 30147573 30147708 -220540146 - MIR SINE MIR -116 146 3 718 275 53 5 chr2 30147742 30147931 -220539923 + MIR SINE MIR 8 205 -57 181 364 15 0 chr2 30147945 30148011 -220539843 - L2 LINE L2 -251 3062 2996 1137 134 77 160 chr2 30148048 30148154 -220539700 + MER49 LTR ERV1 1 114 -809 1745 105 0 4 chr2 30148154 30148422 -220539432 + AluSg SINE Alu 55 321 0 1137 134 77 160 chr2 30148422 30148625 -220539229 + MER49 LTR ERV1 114 287 -636 * 1566 187 43 50 chr2 30148610 30149027 -220538827 + MER4D LTR ERV1 490 903 0 3246 127 4 6 chr2 30149262 30149759 -220538095 - MER41B LTR ERV1 -88 547 52 1013 128 0 7 chr2 30149859 30150007 -220537847 + AluSq SINE Alu 63 209 -104 284 281 0 0 chr2 30151043 30151107 -220536747 + (ATG)n Simple_repeat Simple_repeat 3 66 0 236 299 34 8 chr2 30151512 30151629 -220536225 - L1M2 LINE L1 -834 5466 5347 303 250 0 0 chr2 30152034 30152114 -220535740 - L1M2 LINE L1 -1316 4830 4751 852 257 42 33 chr2 30152116 30152330 -220535524 - MER58A DNA MER1_type 0 224 9 1475 223 44 15 chr2 30152453 30152932 -220534922 - L1M4 LINE L1 -820 6137 5645 1145 146 78 0 chr2 30152937 30153156 -220534698 - Tigger2a DNA MER2_type 0 444 209 2432 120 17 3 chr2 30153156 30153515 -220534339 + THE1B LTR MaLR 1 364 0 3446 83 40 20 chr2 30153529 30154030 -220533824 + THE1-int LTR MaLR 1042 1576 -4 2612 116 3 3 chr2 30154035 30154398 -220533456 + THE1B LTR MaLR 2 364 0 895 185 25 45 chr2 30154398 30154592 -220533262 - Tigger2a DNA MER2_type -232 202 13 858 227 37 7 chr2 30154667 30154940 -220532914 - L1M4 LINE L1 -3608 3349 3069 3315 241 67 26 chr2 30155052 30156255 -220531599 - L1M4 LINE L1 -4974 1881 633 1238 303 131 25 chr2 30156259 30156780 -220531074 - L1M4 LINE L1 -6275 584 9 712 219 25 0 chr2 30157009 30157169 -220530685 + L1MB5 LINE L1 5974 6137 -37 26 50 0 0 chr2 30157169 30157209 -220530645 + AT_rich Low_complexity Low_complexity 1 40 0 258 288 0 0 chr2 30157228 30157287 -220530567 - MER58A DNA MER1_type -162 62 4 21 0 0 0 chr2 30157434 30157455 -220530399 + AT_rich Low_complexity Low_complexity 1 21 0 205 197 155 14 chr2 30157466 30157537 -220530317 - MIR SINE MIR -26 236 156 182 351 0 14 chr2 30159935 30160009 -220527845 + MIR3 SINE MIR 125 197 -11 35 41 0 0 chr2 30160164 30160213 -220527641 + AT_rich Low_complexity Low_complexity 1 49 0 1261 197 112 0 chr2 30160278 30160537 -220527317 - AluJo SINE Alu -24 288 1 239 331 22 72 chr2 30160908 30161089 -220526765 + L2 LINE L2 2915 3086 -186 5473 158 19 9 chr2 30161480 30162440 -220525414 + LTR5 LTR ERVK 1 969 0 262 318 77 41 chr2 30162564 30162734 -220525120 - L2 LINE L2 -1962 1352 1177 39 38 0 0 chr2 30163123 30163176 -220524678 + AT_rich Low_complexity Low_complexity 1 53 0 1556 189 7 24 chr2 30163469 30163765 -220524089 - AluJb SINE Alu -21 291 1 2371 70 0 10 chr2 30164054 30164352 -220523502 - AluY SINE Alu -16 295 1 226 331 54 15 chr2 30164502 30164632 -220523222 - MIR SINE MIR -24 238 104 438 256 24 24 chr2 30164862 30165026 -220522828 + L1M4 LINE L1 4770 4933 -1213 1789 152 54 38 chr2 30165031 30165400 -220522454 + THE1C LTR MaLR 1 375 0 30779 62 1 1 chr2 30165522 30169460 -220518394 - L1P LINE L1 -2209 3937 1 2249 110 0 7 chr2 30169544 30169854 -220518000 - AluSx SINE Alu -4 308 1 32 43 0 0 chr2 30170240 30170286 -220517568 + AT_rich Low_complexity Low_complexity 1 46 0 746 257 53 0 chr2 30171074 30171261 -220516593 - MLT1B LTR MaLR -9 381 185 258 132 0 0 chr2 30171279 30171332 -220516522 + (GA)n Simple_repeat Simple_repeat 1 53 0 770 174 63 16 chr2 30171353 30171536 -220516318 - MLT1B LTR MaLR -193 181 1 1885 150 3 13 chr2 30171850 30172163 -220515691 - AluSx SINE Alu -2 310 1 25 0 0 0 chr2 30172379 30172404 -220515450 + AT_rich Low_complexity Low_complexity 1 25 0 1683 185 3 10 chr2 30172565 30172863 -220514991 - AluJo SINE Alu -8 304 9 4700 66 6 22 chr2 30173010 30173689 -220514165 + L1PA7 LINE L1 5509 6177 0 29 0 0 0 chr2 30174465 30174494 -220513360 + AT_rich Low_complexity Low_complexity 1 29 0 270 141 26 39 chr2 30174699 30174777 -220513077 + GA-rich Low_complexity Low_complexity 2 78 0 2034 112 39 7 chr2 30176427 30176713 -220511141 - AluSg SINE Alu -13 297 3 416 46 0 31 chr2 30177835 30177900 -220509954 + L1PA4 LINE L1 6087 6149 -6 29 28 0 0 chr2 30178407 30178443 -220509411 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr2 30178567 30178597 -220509257 + AT_rich Low_complexity Low_complexity 1 30 0 776 192 41 0 chr2 30178625 30178771 -220509083 - FAM SINE Alu -16 169 18 22 35 0 0 chr2 30179158 30179187 -220508667 + AT_rich Low_complexity Low_complexity 1 29 0 460 277 30 92 chr2 30179614 30179796 -220508058 - MIR SINE MIR 0 262 91 2319 111 0 0 chr2 30179796 30180093 -220507761 - AluSx SINE Alu -15 297 1 460 277 30 92 chr2 30180093 30180174 -220507680 - MIR SINE MIR -171 91 7 2261 157 38 10 chr2 30180318 30180729 -220507125 + L1PA16 LINE L1 5616 6038 -128 270 132 0 0 chr2 30181405 30181458 -220506396 + (CAAT)n Simple_repeat Simple_repeat 2 54 0 270 317 106 0 chr2 30181986 30182090 -220505764 - L2 LINE L2 -8 3305 3191 21 57 0 0 chr2 30182590 30182625 -220505229 + AT_rich Low_complexity Low_complexity 1 35 0 374 295 8 25 chr2 30182686 30182808 -220505046 - MIR3 SINE MIR -3 205 86 750 314 94 26 chr2 30183305 30183970 -220503884 - L2 LINE L2 -13 3300 2596 3702 102 28 65 chr2 30184089 30184315 -220503539 - MER41B-int LTR ERV1 -1993 3953 3720 1911 154 0 0 chr2 30184315 30184595 -220503259 - AluSx SINE Alu -19 293 14 3702 102 28 65 chr2 30184595 30185047 -220502807 - MER41B-int LTR ERV1 -2226 3720 3300 * 3715 145 80 17 chr2 30185035 30185725 -220502129 - MER41B-int LTR ERV1 -3900 3637 2905 2202 152 22 0 chr2 30185725 30186081 -220501773 + THE1B LTR MaLR 1 364 0 667 149 0 18 chr2 30186081 30186195 -220501659 - MER41B-int LTR ERV1 -4201 2062 1951 * 3495 139 36 36 chr2 30186168 30186770 -220501084 - MER41B-int LTR ERV1 -4157 1789 1188 520 128 0 0 chr2 30186766 30186844 -220501010 - MER41B-int LTR ERV1 -5138 808 731 * 1973 139 19 16 chr2 30186837 30187153 -220500701 - MER41B-int LTR ERV1 -5628 318 2 1017 108 19 0 chr2 30187154 30187312 -220500542 - MER41B LTR ERV1 0 635 475 1821 102 36 4 chr2 30187438 30187804 -220500050 - LTR23 LTR ERV1 -10 427 2 23 0 0 0 chr2 30188291 30188314 -220499540 + AT_rich Low_complexity Low_complexity 1 23 0 596 320 79 34 chr2 30188681 30188895 -220498959 - LTR16A LTR ERVL -19 431 228 1345 168 76 4 chr2 30188895 30189157 -220498697 - L1PB4 LINE L1 -2 6154 5874 596 320 79 34 chr2 30189157 30189349 -220498505 - LTR16A LTR ERVL -222 228 2 840 326 111 56 chr2 30190531 30191414 -220496440 - L2 LINE L2 -338 2976 2143 261 0 0 0 chr2 30191414 30191443 -220496411 + (TTA)n Simple_repeat Simple_repeat 2 30 0 2868 53 3 0 chr2 30191443 30191799 -220496055 - L1PA8 LINE L1 -10 6162 5806 840 326 111 56 chr2 30191799 30191868 -220495986 - L2 LINE L2 -1170 2144 1970 1398 146 32 64 chr2 30192160 30192441 -220495413 - AluJb SINE Alu -6 306 35 518 335 127 10 chr2 30192613 30192998 -220494856 - L2 LINE L2 -2865 449 20 26 0 0 0 chr2 30193376 30193402 -220494452 + AT_rich Low_complexity Low_complexity 1 26 0 2115 130 3 3 chr2 30193525 30193833 -220494021 - AluSq SINE Alu -5 308 1 1962 118 0 10 chr2 30194599 30194895 -220492959 + L1MC1 LINE L1 6024 6316 -17 270 81 0 0 chr2 30195861 30195898 -220491956 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 2238 67 27 7 chr2 30196535 30196832 -220491022 + AluY SINE Alu 1 303 -8 1190 307 57 11 chr2 30196976 30197413 -220490441 + L2 LINE L2 1019 1475 -1839 751 259 69 5 chr2 30197437 30197653 -220490201 + MIR SINE MIR 33 262 0 1934 284 78 47 chr2 30197657 30198329 -220489525 + L2 LINE L2 1488 2194 -1120 2229 112 0 3 chr2 30198329 30198624 -220489230 - AluSq SINE Alu -13 300 7 1934 284 78 47 chr2 30198624 30198810 -220489044 + L2 LINE L2 2194 2373 -941 455 108 0 12 chr2 30199290 30199373 -220488481 - L1MA4 LINE L1 -5 6295 6214 995 260 59 24 chr2 30199487 30199867 -220487987 - MER63B DNA MER1_type 0 434 1 21 0 0 0 chr2 30200226 30200247 -220487607 + AT_rich Low_complexity Low_complexity 1 21 0 2024 122 3 14 chr2 30200248 30200577 -220487277 - AluSq SINE Alu 0 326 1 392 249 95 85 chr2 30201189 30201378 -220486476 + L2 LINE L2 2983 3173 -99 637 281 43 0 chr2 30206338 30206523 -220481331 - L2 LINE L2 -1761 1553 1361 291 336 80 0 chr2 30206647 30206772 -220481082 - MER5A DNA MER1_type -18 171 37 1791 193 6 65 chr2 30206879 30207303 -220480551 - MLT2C1 LTR ERVL -7 513 1 185 337 87 0 chr2 30207371 30207463 -220480391 + L2 LINE L2 2926 3025 -247 225 250 0 19 chr2 30207940 30207992 -220479862 + CT-rich Low_complexity Low_complexity 4 54 0 616 269 122 35 chr2 30208259 30208635 -220479219 - HAL1 LINE L1 -1512 995 587 662 266 47 43 chr2 30208838 30209071 -220478783 - HAL1 LINE L1 -2272 235 2 318 261 109 0 chr2 30209464 30209583 -220478271 - HAL1b LINE L1 -1161 187 56 2440 146 30 24 chr2 30209995 30210461 -220477393 - L1MA5 LINE L1 0 6300 5832 4911 168 88 32 chr2 30210561 30210627 -220477227 - L1MA5 LINE L1 -762 5384 5323 2095 104 21 0 chr2 30210627 30210940 -220476914 - AluSq SINE Alu 0 319 1 4911 168 88 32 chr2 30210940 30212147 -220475707 - L1MA5 LINE L1 -823 5323 4123 207 0 0 0 chr2 30212429 30212452 -220475402 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 17653 32 1 2 chr2 30212455 30215361 -220472493 - L1PA4 LINE L1 -2 6153 3252 14113 31 5 2 chr2 30215355 30217833 -220470021 - L1PA2 LINE L1 -1 6154 3671 * 187 337 129 10 chr2 30217959 30218060 -220469794 + L2 LINE L2 3198 3310 -3 929 247 23 9 chr2 30218762 30218981 -220468873 - MIR SINE MIR -26 236 15 555 198 0 0 chr2 30219446 30219547 -220468307 - MER94 DNA DNA -33 101 1 223 370 106 45 chr2 30219624 30219983 -220467871 + L2 LINE L2 2850 3230 -42 819 274 94 0 chr2 30221203 30221426 -220466428 - MIR SINE MIR -5 257 14 1688 163 11 14 chr2 30221622 30221905 -220465949 + AluJo SINE Alu 6 287 -25 24 0 0 0 chr2 30221905 30221929 -220465925 + AT_rich Low_complexity Low_complexity 1 24 0 2041 92 34 0 chr2 30223186 30223480 -220464374 + AluSx SINE Alu 1 304 -8 563 285 32 0 chr2 30224868 30225026 -220462828 - MIR SINE MIR -10 252 90 217 170 0 21 chr2 30225136 30225183 -220462671 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 25 31 0 0 chr2 30225839 30225871 -220461983 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 30225935 30225956 -220461898 + AT_rich Low_complexity Low_complexity 1 21 0 762 167 0 0 chr2 30226092 30226212 -220461642 - FLAM_C SINE Alu -23 120 1 28 61 0 0 chr2 30226292 30226341 -220461513 + AT_rich Low_complexity Low_complexity 1 49 0 183 42 0 0 chr2 30227075 30227099 -220460755 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 338 269 0 19 chr2 30227362 30227470 -220460384 - MER4C LTR ERV1 -205 260 155 4929 127 19 61 chr2 30227564 30228511 -220459343 - THE1C-int LTR MaLR -670 910 4 1871 147 49 30 chr2 30228514 30228882 -220458972 - THE1C LTR MaLR 0 375 1 670 252 22 13 chr2 30228902 30229128 -220458726 + L1M4 LINE L1 5047 5274 -872 514 265 22 6 chr2 30229335 30229516 -220458338 - L1MD3 LINE L1 -3 7992 7809 2006 120 3 20 chr2 30229696 30229963 -220457891 + AluSx SINE Alu 16 279 -33 186 43 0 0 chr2 30229963 30229986 -220457868 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2006 120 3 20 chr2 30229986 30230019 -220457835 + AluSx SINE Alu 279 311 -1 2363 68 0 7 chr2 30230039 30230335 -220457519 + AluY SINE Alu 1 294 -17 1019 174 0 28 chr2 30230340 30230518 -220457336 + FRAM SINE Alu 4 176 0 180 305 49 24 chr2 30230585 30230667 -220457187 - MER5A DNA MER1_type -50 139 56 340 191 0 0 chr2 30230728 30230796 -220457058 - LTR59 LTR ERV1 -116 481 414 1887 102 102 10 chr2 30230798 30231166 -220456688 + LTR7 LTR ERV1 1 450 0 1113 111 139 5 chr2 30231166 30231382 -220456472 - LTR59 LTR ERV1 -175 422 178 276 315 24 6 chr2 30231562 30231727 -220456127 + MER41B LTR ERV1 258 425 -210 976 141 41 12 chr2 30231933 30232103 -220455751 - LTR59 LTR ERV1 -422 175 1 398 164 0 0 chr2 30232449 30232510 -220455344 + MER21B LTR ERV1 36 96 -767 1364 66 132 0 chr2 30233279 30233476 -220454378 - AluSc SINE Alu -3 306 84 453 105 47 0 chr2 30233930 30234016 -220453838 + MER41-int LTR ERV1 2827 2916 -3030 626 95 8 40 chr2 30234016 30234142 -220453712 + THE1C-int LTR MaLR 1459 1580 0 1465 163 118 9 chr2 30234142 30234480 -220453374 + THE1C LTR MaLR 1 375 0 9356 138 27 35 chr2 30234483 30236072 -220451782 + THE1C-int LTR MaLR 4 1580 0 1814 144 66 30 chr2 30236072 30236434 -220451420 + THE1C LTR MaLR 1 375 0 379 205 81 6 chr2 30236718 30236879 -220450975 + (CTATA)n Simple_repeat Simple_repeat 2 174 0 21 36 0 0 chr2 30236938 30236966 -220450888 + AT_rich Low_complexity Low_complexity 1 28 0 2072 242 119 33 chr2 30238080 30238216 -220449638 - Charlie1a DNA MER1_type -1831 930 807 1728 142 78 36 chr2 30238216 30238576 -220449278 + THE1C LTR MaLR 1 375 0 2072 242 119 33 chr2 30238576 30239295 -220448559 - Charlie1a DNA MER1_type -1954 807 1 317 244 152 43 chr2 30239623 30239787 -220448067 - MLT1J2 LTR MaLR 0 450 269 1208 128 12 0 chr2 30241673 30241845 -220446009 - AluSg/x SINE Alu -5 307 134 2136 131 51 17 chr2 30242071 30242423 -220445431 - THE1B LTR MaLR 0 364 1 11446 82 5 2 chr2 30242430 30243675 -220444179 - THE1B-int LTR MaLR -8 1572 321 2009 110 0 4 chr2 30243675 30243948 -220443906 - AluSq SINE Alu -6 307 36 11446 82 5 2 chr2 30243948 30244270 -220443584 - THE1B-int LTR MaLR -1259 321 1 2178 125 51 17 chr2 30244270 30244622 -220443232 - THE1B LTR MaLR 0 364 1 401 148 193 0 chr2 30244774 30244862 -220442992 - THE1A LTR MaLR -250 105 1 24 32 0 0 chr2 30245094 30245125 -220442729 + AT_rich Low_complexity Low_complexity 1 31 0 2772 29 0 0 chr2 30245288 30245597 -220442257 + AluY SINE Alu 1 309 -2 763 163 13 20 chr2 30246357 30246510 -220441344 + L1MA4 LINE L1 5887 6038 -262 428 277 126 13 chr2 30246614 30246773 -220441081 + MIR SINE MIR 60 236 -26 1652 193 0 3 chr2 30247167 30247462 -220440392 - AluJb SINE Alu -17 295 2 870 315 43 13 chr2 30247484 30247789 -220440065 + L2 LINE L2 2999 3312 -1 365 285 60 61 chr2 30250199 30250377 -220437477 + MIR SINE MIR 34 210 -52 511 270 9 0 chr2 30250715 30250830 -220437024 - FLAM_A SINE Alu -17 116 1 892 183 70 15 chr2 30250887 30251160 -220436694 - MER45R DNA AcHobo -102 1479 1192 2517 185 25 4 chr2 30251180 30251693 -220436161 - L1MC3 LINE L1 0 7785 7262 2793 153 53 3 chr2 30251794 30252783 -220435071 - L1P4 LINE L1 -406 6410 5392 2889 211 29 5 chr2 30252794 30253414 -220434440 - L1P4 LINE L1 -4917 1870 1236 1740 164 97 3 chr2 30253665 30254055 -220433799 - MER45R DNA AcHobo -451 1130 704 650 323 0 35 chr2 30254072 30254304 -220433550 + L1P3 LINE L1 2 225 -6562 12570 240 29 12 chr2 30254326 30258108 -220429746 + L1PA16 LINE L1 1358 5272 -1545 3532 121 86 21 chr2 30258108 30258713 -220429141 + LTR9B LTR ERV1 1 644 0 12570 240 29 12 chr2 30258713 30260282 -220427572 + L1PA16 LINE L1 5272 6812 -5 683 164 8 8 chr2 30260285 30260413 -220427441 - MER45R DNA AcHobo -869 712 585 529 144 0 0 chr2 30260415 30260505 -220427349 + L1P4 LINE L1 5724 5813 -350 1043 306 71 48 chr2 30260505 30261126 -220426728 - MER45R DNA AcHobo -946 635 1 261 57 0 0 chr2 30261453 30261488 -220426366 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 621 304 52 43 chr2 30261537 30261767 -220426087 + MIR SINE MIR 23 254 -8 266 135 180 56 chr2 30261839 30261928 -220425926 + L1ME4a LINE L1 5989 6088 -33 186 103 0 0 chr2 30262013 30262042 -220425812 + (TC)n Simple_repeat Simple_repeat 2 30 0 372 77 0 0 chr2 30262059 30262111 -220425743 + (CA)n Simple_repeat Simple_repeat 1 52 0 454 110 50 10 chr2 30262180 30262280 -220425574 + MER53 DNA DNA 3 106 -83 387 157 98 20 chr2 30262329 30262431 -220425423 + MER53 DNA DNA 80 189 0 243 152 0 0 chr2 30262693 30262739 -220425115 + (CA)n Simple_repeat Simple_repeat 1 46 0 407 277 151 6 chr2 30263581 30263740 -220424114 + MIR SINE MIR 7 188 -74 1258 145 26 13 chr2 30265185 30265419 -220422435 - L1M1 LINE L1 -7317 248 12 2069 244 23 5 chr2 30265956 30266514 -220421340 + L1P3 LINE L1 373 940 -5271 3133 99 16 12 chr2 30266514 30266999 -220420855 + LTR15 LTR ERV1 1 487 -6 9732 219 23 40 chr2 30267003 30269917 -220417937 + L1P3 LINE L1 935 3905 -2892 207 203 149 27 chr2 30470975 30471049 -220216805 + MIR SINE MIR 21 103 -105 300 27 0 0 chr2 30471379 30471416 -220216438 + (TG)n Simple_repeat Simple_repeat 1 37 0 185 289 119 62 chr2 30471973 30472167 -220215687 + L2 LINE L2 3109 3313 0 280 248 73 28 chr2 30472198 30472307 -220215547 - MLT1K LTR MaLR -44 544 431 751 250 91 19 chr2 30472388 30472596 -220215258 - MLT1K LTR MaLR -364 224 2 210 245 191 0 chr2 30473180 30473274 -220214580 - MIR SINE MIR -63 145 34 10595 172 23 20 chr2 30473958 30475639 -220212215 + L1 LINE L1 2884 4575 -1571 547 115 0 0 chr2 30475639 30475717 -220212137 + MADE1 DNA Mariner 3 80 0 10595 172 23 20 chr2 30475717 30476162 -220211692 + L1 LINE L1 4575 5017 -1129 5889 29 6 0 chr2 30476262 30476947 -220210907 + L1PA4 LINE L1 5467 6155 0 6537 205 57 23 chr2 30476966 30478895 -220208959 + L1M4 LINE L1 3569 5561 -613 250 191 0 0 chr2 30479205 30479252 -220208602 + MLT1K LTR MaLR 509 555 -33 298 244 110 24 chr2 30479311 30479438 -220208416 + MER5A DNA MER1_type 1 138 -51 2422 70 6 19 chr2 30479438 30479753 -220208101 - AluSx SINE Alu 0 312 2 1198 158 0 11 chr2 30479766 30479956 -220207898 - AluJ SINE Alu -16 296 109 2219 91 3 53 chr2 30479975 30480293 -220207561 - AluSp SINE Alu -11 302 1 2121 151 34 79 chr2 30480295 30480766 -220207088 + LTR46 LTR ERV1 11 460 0 2312 77 40 0 chr2 30480770 30481068 -220206786 + AluSp SINE Alu 1 310 -3 649 193 0 0 chr2 30481078 30481187 -220206667 - AluJ SINE Alu -202 110 2 1181 134 6 0 chr2 30481616 30481787 -220206067 - AluSg/x SINE Alu -10 302 131 1411 291 110 27 chr2 30482931 30483738 -220204116 + L2 LINE L2 745 1618 -1696 1587 128 4 75 chr2 30483758 30483883 -220203971 + AluJo SINE Alu 17 115 -197 2181 98 42 0 chr2 30483883 30484170 -220203684 + AluSx SINE Alu 1 299 -13 1587 128 4 75 chr2 30484170 30484310 -220203544 + AluJo SINE Alu 115 263 -49 331 301 18 30 chr2 30484357 30484523 -220203331 - L1M4 LINE L1 -5110 1432 1269 1168 258 55 48 chr2 30484746 30485346 -220202508 - L1M4 LINE L1 -3324 2822 2219 568 111 12 0 chr2 30485349 30485430 -220202424 + AluJ/FLAM SINE Alu 5 86 -226 623 275 40 75 chr2 30486195 30486569 -220201285 + L1ME3A LINE L1 3750 4110 -2036 1116 226 104 18 chr2 30486571 30487187 -220200667 + L1ME3A LINE L1 4915 5578 -592 695 117 9 27 chr2 30487191 30487302 -220200552 - THE1B LTR MaLR 0 364 256 1628 205 28 31 chr2 30487302 30487693 -220200161 + L1ME3A LINE L1 5582 5971 -199 2671 52 3 0 chr2 30487717 30488026 -220199828 - AluSp SINE Alu -3 310 1 651 171 116 20 chr2 30488146 30488292 -220199562 - MER97b DNA MER1_type? -875 178 19 256 237 17 0 chr2 30488305 30488364 -220199490 + L1ME3A LINE L1 6103 6162 -8 2218 116 10 3 chr2 30488783 30489093 -220198761 - AluSx SINE Alu 0 312 1 299 136 0 2 chr2 30489958 30490011 -220197843 + Alu SINE Alu 254 299 -3 2195 112 3 0 chr2 30490530 30490826 -220197028 - AluSx SINE Alu -10 302 6 1729 161 50 0 chr2 30490976 30491255 -220196599 + AluSx SINE Alu 1 293 -19 1835 134 7 7 chr2 30491737 30492021 -220195833 - AluSq SINE Alu -29 284 1 2220 58 4 0 chr2 30492045 30492306 -220195548 - AluY SINE Alu -12 299 38 506 115 11 11 chr2 30492908 30492995 -220194859 + AluJb SINE Alu 158 244 -68 180 125 0 0 chr2 30493033 30493065 -220194789 + (T)n Simple_repeat Simple_repeat 1 32 0 771 155 8 8 chr2 30493266 30493395 -220194459 - FLAM_C SINE Alu -4 129 1 295 245 122 48 chr2 30494073 30494220 -220193634 + L1ME3A LINE L1 5794 5951 -219 2238 123 0 0 chr2 30494337 30494639 -220193215 + AluSx SINE Alu 1 302 -10 2407 53 0 3 chr2 30494738 30495046 -220192808 + AluY SINE Alu 1 307 0 464 258 91 21 chr2 30495543 30495729 -220192125 + HAL1 LINE L1 2309 2507 0 909 271 51 38 chr2 30495902 30496427 -220191427 + L1MC/D LINE L1 4080 4611 -1535 1342 279 86 11 chr2 30496433 30496909 -220190945 - LTR33 LTR ERVL -2 519 8 532 274 147 30 chr2 30496923 30497619 -220190235 + L1MC/D LINE L1 4795 5577 -743 241 352 8 0 chr2 30497787 30497915 -220189939 + L2 LINE L2 2127 2255 -1059 456 72 0 0 chr2 30498176 30498245 -220189609 + (TG)n Simple_repeat Simple_repeat 2 70 0 256 115 0 33 chr2 30499159 30499220 -220188634 + (TA)n Simple_repeat Simple_repeat 2 60 0 349 322 13 0 chr2 30499227 30499358 -220188496 - MIR SINE MIR -65 143 18 581 257 20 26 chr2 30499591 30499743 -220188111 - LTR33 LTR ERVL 0 521 371 344 319 70 5 chr2 30499761 30499974 -220187880 - LTR33 LTR ERVL -257 264 38 860 165 24 94 chr2 30500082 30500294 -220187560 + MER58A DNA MER1_type 3 199 -25 622 297 30 22 chr2 30500322 30500554 -220187300 - L2 LINE L2 -3 3310 3077 226 308 0 0 chr2 30500826 30500891 -220186963 - MIR SINE MIR -104 104 40 2194 101 14 0 chr2 30502413 30502701 -220185153 + AluSc SINE Alu 1 292 -17 1905 161 0 0 chr2 30503122 30503402 -220184452 - AluJb SINE Alu -32 280 1 222 245 70 0 chr2 30504016 30504086 -220183768 - MIR SINE MIR -77 131 57 478 223 0 27 chr2 30504555 30504667 -220183187 - MER81 DNA DNA -2 112 4 990 184 32 57 chr2 30505682 30506045 -220181809 - LTR48B LTR ERV1 0 644 236 1422 225 7 77 chr2 30506179 30506597 -220181257 + L1MEc LINE L1 285 673 -5723 212 0 0 35 chr2 30506910 30506939 -220180915 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1752 92 0 17 chr2 30506948 30507187 -220180667 - AluSq SINE Alu -78 235 1 5108 77 5 5 chr2 30507581 30508241 -220179613 - PABL_A LTR ERV1 0 660 1 689 263 65 26 chr2 30508266 30508498 -220179356 + LTR16C LTR ERVL 85 325 -166 414 185 0 0 chr2 30508485 30508550 -220179304 + LTR8 LTR ERV1 619 683 -8 * 944 205 15 10 chr2 30508653 30508848 -220179006 + LTR16C LTR ERVL 296 491 0 256 308 26 0 chr2 30508879 30508957 -220178897 - MIR3 SINE MIR -18 190 111 3261 163 45 71 chr2 30509594 30510122 -220177732 + LTR8 LTR ERV1 16 524 -167 2289 88 0 3 chr2 30510122 30510435 -220177419 + AluSp SINE Alu 1 312 0 3261 163 45 71 chr2 30510435 30510599 -220177255 + LTR8 LTR ERV1 524 691 0 264 259 116 27 chr2 30510637 30510749 -220177105 + MIR SINE MIR 59 180 -82 2336 86 3 7 chr2 30512005 30512308 -220175546 + AluSp SINE Alu 2 303 -10 577 246 56 28 chr2 30512467 30512646 -220175208 + MER5A DNA MER1_type 6 189 0 555 198 0 0 chr2 30513194 30513285 -220174569 - Tigger7 DNA MER2_type -1 2486 2396 1868 178 0 3 chr2 30513285 30513594 -220174260 - AluJo SINE Alu -4 308 1 1049 157 211 14 chr2 30513606 30513829 -220174025 - Tigger7 DNA MER2_type -466 267 1 1263 104 4 124 chr2 30514439 30514522 -220173332 - MER50 LTR ERV1 -47 687 596 2200 110 33 0 chr2 30514522 30514821 -220173033 - AluSx SINE Alu -2 310 2 1263 104 4 124 chr2 30514821 30514875 -220172979 - MER50 LTR ERV1 -138 596 537 2308 91 0 13 chr2 30514875 30515182 -220172672 + AluSx SINE Alu 1 303 -9 1263 104 4 124 chr2 30515182 30515302 -220172552 - MER50 LTR ERV1 -197 537 460 1716 162 65 40 chr2 30515303 30515841 -220172013 + MLT2A2 LTR ERVL 1 554 0 1418 146 8 4 chr2 30515856 30516095 -220171759 - MER50 LTR ERV1 -494 240 1 284 203 63 119 chr2 30516875 30516936 -220170918 + MER34 LTR ERV1 1 64 -478 1781 153 3 62 chr2 30516936 30517256 -220170598 - AluJo SINE Alu -11 301 1 284 203 63 119 chr2 30517256 30517337 -220170517 + MER34 LTR ERV1 64 135 -407 * 710 235 93 20 chr2 30517313 30517517 -220170337 + LTR29 LTR ERV1 141 359 -263 298 309 57 52 chr2 30518405 30518809 -220169045 + L2 LINE L2 2867 3272 -41 232 243 118 35 chr2 30519434 30519578 -220168276 - L1ME4a LINE L1 0 6121 5966 624 223 76 24 chr2 30519679 30519922 -220167932 + MIR SINE MIR 12 262 0 702 277 63 12 chr2 30520291 30520544 -220167310 + LTR16A LTR ERVL 92 357 -93 435 148 17 43 chr2 30520543 30520658 -220167196 + LTR16A LTR ERVL 317 428 -22 * 288 301 81 32 chr2 30520662 30520848 -220167006 - L2 LINE L2 -252 3061 2867 9501 171 85 42 chr2 30521170 30522284 -220165570 + L1MDa LINE L1 18 1082 -5458 1770 156 0 42 chr2 30522284 30522591 -220165263 + AluJb SINE Alu 3 296 -16 9501 171 85 42 chr2 30522591 30523724 -220164130 + L1MDa LINE L1 1082 2362 -4178 2846 163 15 91 chr2 30523842 30524007 -220163847 + MER4E LTR ERV1 214 390 -389 2421 78 0 16 chr2 30524007 30524314 -220163540 + AluY SINE Alu 4 305 -6 2846 163 15 91 chr2 30524314 30524761 -220163093 + MER4E LTR ERV1 390 779 0 4236 173 71 46 chr2 30524886 30525420 -220162434 + L1MDa LINE L1 1470 1989 -4551 1715 166 11 14 chr2 30525420 30525703 -220162151 - AluJo SINE Alu -30 282 1 4236 173 71 46 chr2 30525703 30526259 -220161595 + L1MDa LINE L1 1989 2587 -3953 436 198 67 13 chr2 30526256 30526423 -220161431 + L1MA7 LINE L1 6003 6296 -4 * 827 158 0 43 chr2 30526470 30526609 -220161245 + FLAM_C SINE Alu 1 133 0 228 275 55 0 chr2 30526617 30526708 -220161146 + L1MDa LINE L1 2596 2691 -3849 1311 199 122 16 chr2 30526709 30527020 -220160834 + MER2 DNA MER2_type 2 345 0 1985 233 18 0 chr2 30527025 30527523 -220160331 + L1MDa LINE L1 2695 3201 -3339 1305 165 0 75 chr2 30527550 30527805 -220160049 - MER46A DNA MER2_type 0 236 1 233 191 0 0 chr2 30527854 30527896 -220159958 + LTR50 LTR ERVL 1 42 -753 2353 89 10 10 chr2 30527897 30528210 -220159644 - AluSq SINE Alu 0 313 1 24 0 0 0 chr2 30530240 30530264 -220157590 + AT_rich Low_complexity Low_complexity 1 24 0 739 134 21 260 chr2 30530585 30530912 -220156942 + L1MC3 LINE L1 6683 6877 -930 1337 184 37 61 chr2 30530912 30531206 -220156648 + AluJo SINE Alu 1 287 -25 739 134 21 260 chr2 30531206 30531244 -220156610 + L1MC3 LINE L1 6877 6922 -885 297 172 94 66 chr2 30531793 30531941 -220155913 + MIR SINE MIR 17 164 -64 202 184 0 0 chr2 30532238 30532276 -220155578 - L3b LINE CR1 -1 1582 1545 2294 95 10 0 chr2 30532392 30532688 -220155166 + AluSx SINE Alu 1 299 -13 772 213 79 0 chr2 30532716 30532880 -220154974 - MLT1E2 LTR MaLR 0 626 450 694 162 62 95 chr2 30532855 30533034 -220154820 - MLT1E2 LTR MaLR -423 203 31 * 436 314 39 7 chr2 30533556 30533709 -220154145 + L2 LINE L2 3156 3313 0 291 262 155 0 chr2 30534266 30534369 -220153485 - MER5A DNA MER1_type 0 189 71 2025 142 16 0 chr2 30535018 30535321 -220152533 + AluSg SINE Alu 1 308 -2 993 265 175 30 chr2 30535336 30535777 -220152077 + MLT1D LTR MaLR 1 505 0 24 32 0 0 chr2 30535986 30536017 -220151837 + AT_rich Low_complexity Low_complexity 1 31 0 443 279 110 23 chr2 30536065 30536366 -220151488 - L1ME4a LINE L1 -170 5951 5625 230 224 0 0 chr2 30536796 30536845 -220151009 + (TG)n Simple_repeat Simple_repeat 2 50 0 23 0 0 0 chr2 30537230 30537253 -220150601 + AT_rich Low_complexity Low_complexity 1 23 0 1226 246 21 3 chr2 30537291 30537580 -220150274 - L1ME1 LINE L1 -135 6031 5738 1150 223 52 25 chr2 30537583 30537946 -220149908 - L1M4 LINE L1 -2978 3168 2796 562 294 27 0 chr2 30538524 30538711 -220149143 - L1ME1 LINE L1 -1213 4933 4742 180 377 0 14 chr2 30538897 30538966 -220148888 + L2 LINE L2 3018 3085 -187 988 130 0 0 chr2 30539481 30539612 -220148242 - FLAM_C SINE Alu -2 131 1 1018 292 100 48 chr2 30539913 30540722 -220147132 + HAL1 LINE L1 18 868 -1639 378 279 56 39 chr2 30540723 30540956 -220146898 + HAL1 LINE L1 2271 2507 0 479 273 59 55 chr2 30542299 30542537 -220145317 + HAL1 LINE L1 2245 2483 -24 219 253 13 0 chr2 30542561 30542636 -220145218 + A-rich Low_complexity Low_complexity 1 76 0 334 243 22 88 chr2 30542641 30542777 -220145077 - MIR3 SINE MIR 0 208 82 455 209 8 217 chr2 30543056 30543177 -220144677 + MIR SINE MIR 45 190 -72 2167 109 33 10 chr2 30543177 30543480 -220144374 + AluSg SINE Alu 1 310 0 455 209 8 217 chr2 30543480 30543500 -220144354 + MIR SINE MIR 190 212 -50 836 114 0 100 chr2 30543500 30543640 -220144214 + FLAM_C SINE Alu 1 126 -7 198 0 0 0 chr2 30543640 30543662 -220144192 + (TA)n Simple_repeat Simple_repeat 2 23 0 455 209 8 217 chr2 30543662 30543781 -220144073 + MIR SINE MIR 210 252 -10 444 273 7 7 chr2 30544370 30544513 -220143341 + L1ME LINE L1 1025 1167 -5038 2335 202 55 36 chr2 30544598 30544648 -220143206 + L1MC4a LINE L1 7214 7262 -546 2501 137 39 42 chr2 30544648 30545080 -220142774 + MSTB1 LTR MaLR 1 431 -1 2335 202 55 36 chr2 30545080 30545612 -220142242 + L1MC4a LINE L1 7262 7807 -1 214 234 0 21 chr2 30545622 30545669 -220142185 + MIR SINE MIR 204 249 -13 529 202 9 26 chr2 30545882 30545996 -220141858 + MLT1H LTR MaLR 61 172 -377 577 270 103 33 chr2 30545996 30546363 -220141491 + L1ME LINE L1 1428 1820 -4576 332 284 65 40 chr2 30546579 30546780 -220141074 + L1ME LINE L1 2111 2316 -4080 576 299 102 43 chr2 30546800 30547647 -220140207 + L1ME LINE L1 4950 5863 -376 223 281 0 0 chr2 30547648 30547705 -220140149 - MIR SINE MIR 0 262 206 2234 102 0 10 chr2 30547710 30548013 -220139841 - AluSg1 SINE Alu -9 300 1 1178 237 93 64 chr2 30548471 30548859 -220138995 + MLT1I LTR MaLR 10 408 -1 315 324 29 22 chr2 30549278 30549414 -220138440 - L2 LINE L2 -4 3309 3173 2517 152 23 5 chr2 30549414 30549808 -220138046 + MER57A LTR ERV1 3 403 0 807 162 28 0 chr2 30549929 30550071 -220137783 + L1MB1 LINE L1 6023 6168 0 234 360 129 21 chr2 30550101 30550287 -220137567 - L2 LINE L2 -338 2976 2771 21 0 0 0 chr2 30550303 30550324 -220137530 + AT_rich Low_complexity Low_complexity 1 21 0 2012 146 0 19 chr2 30550324 30550639 -220137215 - AluJo SINE Alu -3 309 1 5737 149 4 22 chr2 30550679 30552516 -220135338 - L1PB1 LINE L1 -186 5965 4167 200 318 87 65 chr2 30552537 30552716 -220135138 - L2 LINE L2 -674 2640 2451 2282 134 95 42 chr2 30552716 30553148 -220134706 + MSTB2 LTR MaLR 1 455 -2 200 318 87 65 chr2 30553148 30553245 -220134609 - L2 LINE L2 -863 2451 2358 1028 256 83 44 chr2 30553336 30553696 -220134158 - MLT1A2 LTR MaLR 0 374 1 267 226 0 16 chr2 30554340 30554402 -220133452 + MER91 DNA MER1_type 80 140 0 226 271 93 19 chr2 30554497 30554604 -220133250 + MIR SINE MIR 148 262 0 325 211 234 31 chr2 30554904 30555032 -220132822 + L1MA10 LINE L1 6174 6327 -7 1868 86 4 4 chr2 30555935 30556179 -220131675 - AluSp SINE Alu -8 305 62 3502 143 31 31 chr2 30556451 30557026 -220130828 + Tigger4(Zombi) DNA MER2_type 1 575 -2156 3879 101 38 11 chr2 30557028 30557601 -220130253 + Tigger4(Zombi) DNA MER2_type 2143 2731 0 263 256 39 0 chr2 30557601 30557679 -220130175 - MLT1L LTR MaLR -330 285 205 393 324 107 51 chr2 30557917 30558019 -220129835 + L2 LINE L2 2584 2679 -593 2419 73 10 0 chr2 30558019 30558322 -220129532 - AluSq SINE Alu -7 306 1 393 324 107 51 chr2 30558322 30558677 -220129177 + L2 LINE L2 2679 3059 -213 283 120 0 9 chr2 30558688 30558738 -220129116 - MLT1I LTR MaLR -12 438 345 663 260 124 34 chr2 30558740 30559005 -220128849 - MLT1I LTR MaLR -23 386 98 447 305 85 34 chr2 30559169 30559405 -220128449 - MIR SINE MIR -13 249 2 268 305 59 51 chr2 30559542 30559660 -220128194 + L2 LINE L2 2966 3084 -188 490 305 142 23 chr2 30559922 30560431 -220127423 - L2 LINE L2 -96 3217 2654 641 257 222 20 chr2 30560464 30560734 -220127120 - L2 LINE L2 -869 2445 2090 1518 75 150 13 chr2 30560734 30560961 -220126893 + AluY SINE Alu 41 298 -13 641 257 222 20 chr2 30560961 30561032 -220126822 - L2 LINE L2 -1224 2090 2035 470 125 25 0 chr2 30561461 30561541 -220126313 + MER5A DNA MER1_type 108 189 0 278 265 120 34 chr2 30562077 30562194 -220125660 + MIR SINE MIR 18 144 -64 370 232 26 99 chr2 30562202 30562245 -220125609 - MER5A DNA MER1_type 0 189 144 460 279 0 0 chr2 30562245 30562356 -220125498 + MER81 DNA DNA 4 114 0 370 232 26 99 chr2 30562356 30562463 -220125391 - MER5A DNA MER1_type -45 144 50 426 218 112 95 chr2 30562504 30562580 -220125274 - MER5A DNA MER1_type -6 183 110 2353 57 3 7 chr2 30562580 30562880 -220124974 - AluY SINE Alu -12 299 1 426 218 112 95 chr2 30562880 30562982 -220124872 - MER5A DNA MER1_type -79 110 2 186 251 86 68 chr2 30563667 30563830 -220124024 - MIR3 SINE MIR -27 181 16 208 268 36 0 chr2 30564297 30564353 -220123501 + GA-rich Low_complexity Low_complexity 6 63 0 365 255 37 81 chr2 30566073 30566234 -220121620 + MIR SINE MIR 20 173 -89 2197 89 0 4 chr2 30566401 30566682 -220121172 + AluSq SINE Alu 1 280 -33 464 120 0 11 chr2 30566706 30566798 -220121056 + (GGAA)n Simple_repeat Simple_repeat 2 92 0 589 294 71 6 chr2 30568483 30568653 -220119201 - MIR SINE MIR -80 182 2 986 230 174 17 chr2 30570677 30571038 -220116816 + MER57B LTR ERV1 17 434 0 693 200 69 7 chr2 30571137 30571282 -220116572 - MER5B DNA MER1_type -22 156 3 356 265 0 64 chr2 30571955 30572147 -220115707 + MIR SINE MIR 21 248 -14 2382 82 0 0 chr2 30573524 30573817 -220114037 + AluY SINE Alu 1 293 -18 1335 222 116 43 chr2 30574114 30574537 -220113317 + LTR16A1 LTR ERVL 1 454 -3 211 356 11 0 chr2 30574550 30574637 -220113217 - L2 LINE L2 -633 2681 2594 525 111 0 0 chr2 30575795 30575867 -220111987 + tRNA-Arg-CGC tRNA tRNA 1 72 -4 2072 130 0 3 chr2 30575887 30576180 -220111674 + AluSx SINE Alu 1 292 -20 29 28 0 0 chr2 30576180 30576216 -220111638 + AT_rich Low_complexity Low_complexity 1 36 0 665 217 37 16 chr2 30576731 30576920 -220110934 + MIR SINE MIR 20 212 -50 517 159 206 0 chr2 30577265 30577372 -220110482 - L2 LINE L2 0 3313 3185 658 264 26 0 chr2 30577614 30577807 -220110047 - MIR SINE MIR -2 260 63 766 236 134 86 chr2 30578432 30578910 -220108944 + HAL1 LINE L1 2 502 -2005 228 170 27 107 chr2 30579001 30579068 -220108786 - L1M4 LINE L1 -1700 4446 4390 2125 118 6 10 chr2 30579068 30579100 -220108754 - AluSx SINE Alu 0 312 281 180 0 0 0 chr2 30579100 30579120 -220108734 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2125 118 6 10 chr2 30579120 30579400 -220108454 - AluSx SINE Alu -31 281 1 228 170 27 107 chr2 30579400 30579444 -220108410 - L1M4 LINE L1 -1756 4390 4344 2027 119 11 4 chr2 30579491 30579805 -220108049 - AluSx SINE Alu 0 322 7 2560 44 29 3 chr2 30579859 30580174 -220107680 + L1PA7 LINE L1 5799 6121 -33 2402 68 3 17 chr2 30580601 30580897 -220106957 - AluSp SINE Alu -9 304 13 1191 256 40 54 chr2 30580918 30581512 -220106342 - L1M4 LINE L1 -1889 4257 3672 398 280 35 14 chr2 30581531 30581674 -220106180 + MIR SINE MIR 106 251 -11 310 306 8 25 chr2 30581986 30582107 -220105747 + MIR SINE MIR 33 151 -111 22028 142 63 15 chr2 30582111 30586555 -220101299 + L1M1 LINE L1 20 4683 -2882 688 157 37 30 chr2 30587033 30587156 -220100698 + BC200 scRNA scRNA 2 128 -72 2216 111 25 6 chr2 30587156 30587515 -220100339 + L1MA2 LINE L1 5939 6304 0 1882 156 0 30 chr2 30587591 30587892 -220099962 + AluJb SINE Alu 3 294 -18 211 167 0 0 chr2 30588054 30588090 -220099764 - MIR SINE MIR -170 92 57 1883 172 3 3 chr2 30588941 30589238 -220098616 + AluJb SINE Alu 1 297 -15 641 299 50 55 chr2 30589567 30589931 -220097923 - L2 LINE L2 -2 3270 2909 1681 153 0 11 chr2 30590130 30590405 -220097449 - AluJo SINE Alu -20 292 21 2173 123 0 3 chr2 30590572 30590872 -220096982 + AluSx SINE Alu 1 299 -13 763 197 11 49 chr2 30591074 30591257 -220096597 + L1ME1 LINE L1 5863 6038 -128 441 209 45 21 chr2 30591335 30591461 -220096393 + L1ME1 LINE L1 6052 6183 -1 2243 105 7 0 chr2 30592147 30592451 -220095403 + AluSx SINE Alu 1 306 -6 291 256 8 72 chr2 30592803 30592928 -220094926 - MIR SINE MIR -42 220 104 1674 164 63 7 chr2 30592938 30593224 -220094630 - AluJb SINE Alu -10 302 1 323 267 52 26 chr2 30594036 30594152 -220093702 + L1MEd LINE L1 59 177 -5942 317 268 106 39 chr2 30594371 30594550 -220093304 - MIR SINE MIR -44 218 28 22 42 0 0 chr2 30594922 30594946 -220092908 + AT_rich Low_complexity Low_complexity 1 24 0 697 134 9 7 chr2 30594946 30595179 -220092675 + AluJ SINE Alu 1 297 -15 241 209 163 7 chr2 30595341 30595494 -220092360 + L1MEd LINE L1 651 827 -5292 * 1752 233 29 57 chr2 30595484 30595791 -220092063 + L1ME2 LINE L1 5647 5935 -229 2240 96 3 0 chr2 30595791 30596104 -220091750 + AluSx SINE Alu 1 314 0 1752 233 29 57 chr2 30596104 30596319 -220091535 + L1ME2 LINE L1 5935 6155 -9 2204 100 20 3 chr2 30597387 30597686 -220090168 + AluSx SINE Alu 1 304 -8 1693 150 22 29 chr2 30597689 30598003 -220089851 - L1MA7 LINE L1 -130 6161 5850 357 111 0 0 chr2 30598003 30598063 -220089791 + L1MA7 LINE L1 6229 6291 0 2026 212 146 38 chr2 30598767 30599001 -220088853 + LTR50 LTR ERVL 52 259 -536 2245 110 7 0 chr2 30599001 30599293 -220088561 - AluSg SINE Alu -16 294 1 2026 212 146 38 chr2 30599293 30599614 -220088240 + LTR50 LTR ERVL 259 685 -110 198 0 0 0 chr2 30599614 30599636 -220088218 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2026 212 146 38 chr2 30599636 30599711 -220088143 + LTR50 LTR ERVL 685 751 -44 2216 55 136 7 chr2 30599711 30600046 -220087808 + L1PA5 LINE L1 5795 6169 0 286 213 53 107 chr2 30600047 30600112 -220087742 - L1M4 LINE L1 -1628 4518 4451 1958 136 45 45 chr2 30600112 30600444 -220087410 + MER1B DNA MER1_type 5 336 -1 286 213 53 107 chr2 30600444 30600528 -220087326 - L1M4 LINE L1 -1695 4451 4377 1610 190 68 61 chr2 30600538 30600637 -220087217 + L1M4 LINE L1 4520 4617 -1529 1989 129 0 20 chr2 30600637 30600939 -220086915 + AluJb SINE Alu 9 304 -8 1610 190 68 61 chr2 30600939 30601297 -220086557 + L1M4 LINE L1 4617 4980 -1166 2355 78 0 7 chr2 30601765 30602061 -220085793 + AluY SINE Alu 1 294 -17 384 355 87 35 chr2 30602107 30602451 -220085403 - L2 LINE L2 -13 3259 2898 1449 101 40 0 chr2 30602616 30602815 -220085039 + AluSp SINE Alu 105 311 -2 333 0 0 0 chr2 30603117 30603154 -220084700 + (TC)n Simple_repeat Simple_repeat 2 38 0 438 298 11 58 chr2 30603430 30603621 -220084233 + MER5A DNA MER1_type 2 183 -6 228 174 0 0 chr2 30604400 30604446 -220083408 - MIR SINE MIR -59 149 104 225 0 0 0 chr2 30604698 30604723 -220083131 + (A)n Simple_repeat Simple_repeat 1 25 0 1585 212 129 78 chr2 30604747 30605322 -220082532 - MER45C DNA AcHobo -349 604 1 732 152 144 2 chr2 30605921 30606084 -220081770 - L1MC1 LINE L1 -239 6094 5916 323 155 119 0 chr2 30606153 30606237 -220081617 + MIR SINE MIR 77 170 -92 438 122 0 37 chr2 30607193 30607275 -220080579 - L1MC1 LINE L1 -430 5903 5825 513 127 0 0 chr2 30607279 30607358 -220080496 - AluS SINE Alu -12 300 222 3151 123 34 23 chr2 30607358 30607913 -220079941 - LTR9B LTR ERV1 0 644 27 2449 59 3 13 chr2 30607913 30608216 -220079638 - AluY SINE Alu -11 300 1 3151 123 34 23 chr2 30608216 30608244 -220079610 - LTR9B LTR ERV1 -617 27 1 1399 139 0 10 chr2 30608250 30608458 -220079396 - AluSx SINE Alu -106 206 1 1498 212 130 39 chr2 30608502 30608988 -220078866 - LTR10B LTR ERV1 -5 542 13 1030 134 34 6 chr2 30608990 30609176 -220078678 - L1MA2 LINE L1 -473 5831 5632 231 304 63 13 chr2 30609434 30609513 -220078341 + L2 LINE L2 3138 3220 -52 214 256 77 13 chr2 30609733 30609811 -220078043 - MIR3 SINE MIR -113 95 13 2393 103 30 81 chr2 30609835 30610232 -220077622 - MER51B LTR ERV1 0 377 1 405 329 60 0 chr2 30610475 30610624 -220077230 - MIR SINE MIR -48 214 57 1583 192 12 35 chr2 30610658 30611012 -220076842 - MLT1C LTR MaLR -42 584 81 362 255 21 0 chr2 30611262 30611356 -220076498 - MLT1C LTR MaLR -371 96 1 268 287 78 23 chr2 30611499 30611628 -220076226 + MIR3 SINE MIR 50 185 -23 262 316 30 60 chr2 30612308 30612476 -220075378 - L1MC4a LINE L1 -1880 5928 5766 289 279 22 109 chr2 30613101 30613148 -220074706 - L1ME3A LINE L1 0 6170 6120 1952 186 9 0 chr2 30613148 30613493 -220074361 - MER7A DNA MER2_type 0 346 1 289 279 22 109 chr2 30613493 30613674 -220074180 - L1ME3A LINE L1 -50 6120 5962 234 0 0 0 chr2 30613732 30613758 -220074096 + (TA)n Simple_repeat Simple_repeat 1 26 0 2371 175 54 36 chr2 30614104 30614707 -220073147 - L1ME3A LINE L1 -364 5802 5189 2238 82 7 0 chr2 30614738 30615017 -220072837 - AluSq SINE Alu -32 281 1 1018 180 136 22 chr2 30615017 30615245 -220072609 - MLT1D LTR MaLR -52 453 200 4420 127 31 64 chr2 30615274 30615322 -220072532 - L1MB2 LINE L1 0 6171 6123 1519 156 7 81 chr2 30615322 30615630 -220072224 + AluJo SINE Alu 7 291 -21 4420 127 31 64 chr2 30615630 30615722 -220072132 - L1MB2 LINE L1 -48 6123 6029 2827 135 9 2 chr2 30615722 30616153 -220071701 + MER57B LTR ERV1 1 434 0 4420 127 31 64 chr2 30616153 30616822 -220071032 - L1MB2 LINE L1 -142 6029 5388 687 165 60 189 chr2 30616827 30617075 -220070779 - MLT1D LTR MaLR -289 216 1 2026 124 0 0 chr2 30617118 30617392 -220070462 + AluY SINE Alu 1 274 -37 195 42 0 0 chr2 30617396 30617420 -220070434 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 1663 193 42 20 chr2 30617621 30617978 -220069876 + MLT1A1 LTR MaLR 1 365 0 357 43 0 0 chr2 30618043 30618090 -220069764 + (CA)n Simple_repeat Simple_repeat 2 48 0 868 144 0 8 chr2 30618951 30619083 -220068771 + FLAM_C SINE Alu 1 131 -12 341 292 36 18 chr2 30619292 30619460 -220068394 + L1ME1 LINE L1 3805 3975 -2171 2482 80 0 6 chr2 30619539 30619850 -220068004 + AluSc SINE Alu 1 309 0 235 245 20 59 chr2 30619850 30619952 -220067902 + L1ME1 LINE L1 4160 4257 -1889 2334 111 14 72 chr2 30620032 30620446 -220067408 - MLT1B LTR MaLR 0 390 1 268 283 17 92 chr2 30620518 30620691 -220067163 + L1ME1 LINE L1 4460 4619 -1527 639 169 52 1 chr2 30621076 30621216 -220066638 + MIR SINE MIR 75 219 -43 22 35 0 0 chr2 30621220 30621249 -220066605 + AT_rich Low_complexity Low_complexity 1 29 0 330 273 32 111 chr2 30621354 30621466 -220066388 + L1ME1 LINE L1 5681 5764 -357 2213 113 0 0 chr2 30621466 30621758 -220066096 + AluSx SINE Alu 1 292 -20 330 273 32 111 chr2 30621758 30621898 -220065956 + L1ME1 LINE L1 5764 5913 -208 2407 77 3 0 chr2 30622091 30622389 -220065465 + AluSg SINE Alu 1 299 -11 31 44 0 0 chr2 30623932 30623977 -220063877 + GC_rich Low_complexity Low_complexity 1 45 0 26 30 0 0 chr2 30624110 30624143 -220063711 + GC_rich Low_complexity Low_complexity 1 33 0 200 91 0 30 chr2 30624476 30624509 -220063345 + (CCG)n Simple_repeat Simple_repeat 2 33 0 485 211 149 40 chr2 30626916 30627128 -220060726 - MIR SINE MIR -7 255 24 1087 218 109 14 chr2 30627413 30627698 -220060156 - MER58B DNA MER1_type -8 333 22 663 262 26 19 chr2 30628554 30628801 -220059053 + L1ME1 LINE L1 5927 6161 -5 210 316 105 0 chr2 30629315 30629429 -220058425 + MIR SINE MIR 129 254 -8 2427 74 6 10 chr2 30629519 30629831 -220058023 - AluY SINE Alu 0 311 1 1095 179 262 3 chr2 30629854 30630144 -220057710 - MLT1A1 LTR MaLR 0 365 1 416 281 130 44 chr2 30630967 30631237 -220056617 - MER102b DNA MER1_type 0 341 49 2330 105 0 0 chr2 30631373 30631668 -220056186 - AluSx SINE Alu -17 295 1 198 264 127 36 chr2 30632568 30632678 -220055176 + MIR SINE MIR 74 193 -69 2368 92 0 0 chr2 30633632 30633926 -220053928 + AluSg SINE Alu 1 294 -16 814 216 43 0 chr2 30634481 30634643 -220053211 + MER58A DNA MER1_type 42 210 -14 22 0 0 0 chr2 30637492 30637514 -220050340 + AT_rich Low_complexity Low_complexity 1 22 0 225 253 84 53 chr2 30638413 30638508 -220049346 - MER5A DNA MER1_type -22 167 70 207 88 0 0 chr2 30638511 30638545 -220049309 + (T)n Simple_repeat Simple_repeat 1 34 0 914 223 116 37 chr2 30638573 30638815 -220049039 + MER21B LTR ERV1 3 263 -600 5039 170 51 11 chr2 30638858 30639800 -220048054 + MER4B-int LTR ERV1 3079 4058 -2700 2299 107 0 3 chr2 30640055 30640363 -220047491 + AluSg SINE Alu 1 307 -3 262 200 43 29 chr2 30640374 30640444 -220047410 + MIR SINE MIR 73 143 -65 26 30 0 0 chr2 30641703 30641736 -220046118 + AT_rich Low_complexity Low_complexity 1 33 0 329 257 76 0 chr2 30643152 30643257 -220044597 - MIR3 SINE MIR -48 160 48 926 221 14 5 chr2 30643339 30643561 -220044293 + MIR SINE MIR 9 232 -30 193 277 62 62 chr2 30643843 30643860 -220043994 - MIR SINE MIR -50 212 196 827 204 44 0 chr2 30643860 30644041 -220043813 - MER5A DNA MER1_type 0 189 1 193 277 62 62 chr2 30644041 30644153 -220043701 - MIR SINE MIR -65 197 83 732 199 24 6 chr2 30644860 30645026 -220042828 + MER5B DNA MER1_type 10 178 0 374 143 13 0 chr2 30645062 30645139 -220042715 + (TGGA)n Simple_repeat Simple_repeat 1 78 0 312 367 38 9 chr2 30645246 30645456 -220042398 - L2 LINE L2 -463 2851 2636 238 206 0 48 chr2 30645599 30645662 -220042192 - MIR3 SINE MIR -135 73 14 843 134 0 22 chr2 30645884 30646018 -220041836 - FLAM_C SINE Alu -2 131 1 891 100 0 50 chr2 30646377 30646550 -220041304 - FLAM_C SINE Alu 0 166 1 205 281 288 13 chr2 30646719 30646872 -220040982 + MER91A DNA MER1_type 1 195 -1 476 239 35 1 chr2 30646914 30647045 -220040809 + MIR SINE MIR 4 137 -71 439 244 65 75 chr2 30647119 30647189 -220040665 + MIR SINE MIR 49 118 -144 2330 95 0 19 chr2 30647189 30647504 -220040350 - AluSc SINE Alu 0 309 1 439 244 65 75 chr2 30647504 30647634 -220040220 + MIR SINE MIR 118 247 -15 885 190 76 0 chr2 30647728 30647818 -220040036 + MLT1F LTR MaLR 345 427 -115 1857 169 54 23 chr2 30647818 30648172 -220039682 - MLT1A1 LTR MaLR 0 365 1 885 190 76 0 chr2 30648172 30648265 -220039589 + MLT1F LTR MaLR 427 542 0 2362 63 20 13 chr2 30648285 30648588 -220039266 + AluY SINE Alu 1 305 -6 205 136 68 23 chr2 30650097 30650141 -220037713 + L2 LINE L2 3265 3310 -3 250 250 0 0 chr2 30650212 30650272 -220037582 - L2 LINE L2 -4 3309 3250 1943 166 3 3 chr2 30650639 30650946 -220036908 - AluJb SINE Alu -5 307 1 767 224 13 0 chr2 30651630 30651782 -220036072 + MER45A DNA AcHobo 24 177 -1 397 256 29 39 chr2 30651782 30651962 -220035892 - MIR SINE MIR -63 145 12 23 54 0 0 chr2 30652262 30652299 -220035555 + AT_rich Low_complexity Low_complexity 1 37 0 359 274 212 6 chr2 30652636 30652829 -220035025 + MIR SINE MIR 31 261 -1 740 241 7 0 chr2 30652999 30653144 -220034710 + MER63A DNA MER1_type 53 198 -12 405 305 36 45 chr2 30653166 30653402 -220034452 + MIR SINE MIR 30 259 -3 2333 107 0 3 chr2 30653543 30653852 -220034002 - AluSg SINE Alu 0 310 3 602 250 100 5 chr2 30654230 30654430 -220033424 + MIR SINE MIR 36 254 -8 359 151 125 21 chr2 30655122 30655224 -220032630 + L1MC/D LINE L1 5717 5827 -304 2018 175 31 6 chr2 30656096 30656451 -220031403 - MLT1A1 LTR MaLR -1 364 1 1506 244 141 32 chr2 30656802 30657334 -220030520 - MLT1G3 LTR MaLR 0 590 1 291 289 10 10 chr2 30657817 30657921 -220029933 + MIR SINE MIR 101 204 -58 1183 150 10 25 chr2 30658252 30658435 -220029419 - AluSg/x SINE Alu -11 301 120 1502 114 0 10 chr2 30658435 30658637 -220029217 - AluSx SINE Alu -112 200 1 1183 150 10 25 chr2 30658637 30658653 -220029201 - AluSg/x SINE Alu -192 120 105 2276 81 7 7 chr2 30659067 30659386 -220028468 - AluSp SINE Alu 0 319 1 5913 218 40 29 chr2 30659678 30661431 -220026423 + L1MD1 LINE L1 2117 4385 -1761 2283 104 0 7 chr2 30661431 30661729 -220026125 + AluSx SINE Alu 1 296 -16 5913 218 40 29 chr2 30661729 30661884 -220025970 + L1MD1 LINE L1 4385 4537 -1609 1086 196 18 9 chr2 30661889 30662113 -220025741 + L1MD1 LINE L1 5603 5828 -414 963 128 13 13 chr2 30662113 30662250 -220025604 + AluSg/x SINE Alu 145 284 -28 961 101 0 13 chr2 30662250 30662409 -220025445 + (GGAA)n Simple_repeat Simple_repeat 3 159 0 963 128 13 13 chr2 30662409 30662420 -220025434 + AluSg/x SINE Alu 283 293 -19 1472 163 70 20 chr2 30662420 30662720 -220025134 + L1MD1 LINE L1 5819 6133 -109 1685 164 47 0 chr2 30662928 30663082 -220024772 - AluJb SINE Alu -24 288 114 216 0 0 0 chr2 30663082 30663106 -220024748 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1685 164 47 0 chr2 30663106 30663226 -220024628 - AluJb SINE Alu -198 114 1 397 307 132 27 chr2 30663305 30663676 -220024178 - L1MC4a LINE L1 -1898 5910 5501 701 154 0 8 chr2 30664084 30664201 -220023653 + FLAM_C SINE Alu 1 116 -17 21 36 0 0 chr2 30664201 30664229 -220023625 + AT_rich Low_complexity Low_complexity 1 28 0 532 321 9 5 chr2 30664608 30664823 -220023031 + LTR16B LTR ERVL 246 461 -3 277 263 53 0 chr2 30664954 30665030 -220022824 + MIR3 SINE MIR 99 178 -30 28 0 0 0 chr2 30665318 30665346 -220022508 + AT_rich Low_complexity Low_complexity 1 28 0 734 145 0 8 chr2 30665346 30665463 -220022391 - FLAM_C SINE Alu -17 116 1 1860 113 3 80 chr2 30665699 30666010 -220021844 + AluSx SINE Alu 2 288 -24 33 66 0 0 chr2 30666158 30666219 -220021635 + AT_rich Low_complexity Low_complexity 1 61 0 556 282 194 41 chr2 30666306 30667192 -220020662 + L2 LINE L2 2283 3312 -1 1994 130 40 13 chr2 30667213 30667513 -220020341 - AluJb SINE Alu -4 308 1 495 299 69 15 chr2 30667557 30667818 -220020036 - L1MC4a LINE L1 -1921 5887 5613 2557 64 0 0 chr2 30668040 30668337 -220019517 + AluY SINE Alu 1 297 -14 626 291 25 45 chr2 30668363 30668454 -220019400 + MIR SINE MIR 3 94 -168 3142 132 43 61 chr2 30668454 30669076 -220018778 - LTR36 LTR ERV1 0 611 1 626 291 25 45 chr2 30669076 30669228 -220018626 + MIR SINE MIR 94 241 -21 279 269 21 43 chr2 30671031 30671124 -220016730 + MLT1K LTR MaLR 477 567 -21 682 152 9 0 chr2 30671642 30671747 -220016107 - Tigger7 DNA MER2_type 0 2491 2386 703 142 49 195 chr2 30671748 30671953 -220015901 - Tigger7 DNA MER2_type -499 234 60 1351 164 102 58 chr2 30672887 30672951 -220014903 - MLT1D LTR MaLR 0 505 445 2301 100 3 0 chr2 30672951 30673252 -220014602 - AluSx SINE Alu -10 302 1 1351 164 102 58 chr2 30673252 30673480 -220014374 - MLT1D LTR MaLR -60 445 200 3171 120 23 13 chr2 30673509 30673557 -220014297 - L1MB2 LINE L1 0 6171 6125 1597 163 3 75 chr2 30673557 30673864 -220013990 + AluJo SINE Alu 7 291 -21 3171 120 23 13 chr2 30673864 30673956 -220013898 - L1MB2 LINE L1 -46 6125 6035 2827 135 9 2 chr2 30673956 30674387 -220013467 + MER57B LTR ERV1 1 434 0 3171 120 23 13 chr2 30674387 30674780 -220013074 - L1MB2 LINE L1 -136 6035 5644 292 274 44 53 chr2 30675369 30675435 -220012419 + MIR3 SINE MIR 86 152 -56 2098 129 0 3 chr2 30675435 30675737 -220012117 + AluSx SINE Alu 1 301 -11 292 274 44 53 chr2 30675737 30675783 -220012071 + MIR3 SINE MIR 152 197 -11 625 177 26 0 chr2 30676165 30676278 -220011576 + MLT1D LTR MaLR 345 460 -45 * 865 187 20 0 chr2 30676248 30676398 -220011456 - MLT1A1 LTR MaLR -28 337 185 559 243 102 69 chr2 30676674 30676738 -220011116 - L1MC5 LINE L1 -86 7875 7815 1688 170 2 88 chr2 30676738 30677137 -220010717 + MLT1A1 LTR MaLR 1 365 0 559 243 102 69 chr2 30677137 30677476 -220010378 - L1MC5 LINE L1 -146 7815 7459 1750 276 106 12 chr2 30677635 30678200 -220009654 - MLT2F LTR ERVL 0 663 46 2067 132 0 3 chr2 30678576 30678880 -220008974 - AluSg SINE Alu -7 303 1 236 209 23 105 chr2 30678985 30679071 -220008783 - MIR SINE MIR 0 262 184 856 199 144 34 chr2 30679290 30679526 -220008328 + MLT1H LTR MaLR 78 339 -210 965 226 78 68 chr2 30679855 30680341 -220007513 - L1ME4a LINE L1 -38 6083 5593 2156 125 0 3 chr2 30681256 30681567 -220006287 + AluSx SINE Alu 1 310 -2 356 346 46 0 chr2 30681695 30681848 -220006006 + MIR SINE MIR 73 232 -30 1840 153 20 3 chr2 30683343 30683638 -220004216 - AluSx SINE Alu -12 300 1 429 302 0 9 chr2 30683842 30683948 -220003906 - MER5B DNA MER1_type -72 106 2 419 294 63 16 chr2 30683998 30684124 -220003730 - L2 LINE L2 0 3272 3141 1870 138 0 0 chr2 30684588 30684927 -220002927 - AluSx SINE Alu 0 345 7 331 232 14 0 chr2 30685356 30685425 -220002429 - MLT1L LTR MaLR -374 241 172 779 163 77 77 chr2 30685443 30685523 -220002331 + MER106A DNA MER1_type 1 80 -156 1967 134 0 3 chr2 30685523 30685814 -220002040 + AluSx SINE Alu 2 291 -21 779 163 77 77 chr2 30685814 30685942 -220001912 + MER106A DNA MER1_type 79 209 -27 236 277 277 0 chr2 30686454 30686548 -220001306 + L2 LINE L2 3139 3258 -14 234 62 0 0 chr2 30686554 30686586 -220001268 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 246 309 12 12 chr2 30686589 30686673 -220001181 + MIR SINE MIR 23 108 -100 1364 193 59 3 chr2 30687032 30687201 -220000653 - AluJo SINE Alu -6 306 113 198 0 0 0 chr2 30687201 30687223 -220000631 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1364 193 59 3 chr2 30687223 30687343 -220000511 - AluJo SINE Alu -199 113 1 194 333 0 0 chr2 30687684 30687735 -220000119 - L2 LINE L2 -12 3260 3210 22 35 0 0 chr2 30687952 30687981 -219999873 + AT_rich Low_complexity Low_complexity 1 29 0 2524 51 0 6 chr2 30687999 30688311 -219999543 - AluY SINE Alu -1 310 1 851 163 0 15 chr2 30688523 30688658 -219999196 + FLAM_C SINE Alu 1 133 0 330 67 0 0 chr2 30688686 30688731 -219999123 + (CA)n Simple_repeat Simple_repeat 2 46 0 696 250 12 17 chr2 30688741 30688913 -219998941 - MER5B DNA MER1_type -7 171 1 286 274 22 97 chr2 30689505 30689552 -219998302 - L1ME3A LINE L1 0 6170 6121 2020 177 9 0 chr2 30689552 30689897 -219997957 - MER7A DNA MER2_type 0 346 1 286 274 22 97 chr2 30689897 30690075 -219997779 - L1ME3A LINE L1 -49 6121 5962 237 83 0 0 chr2 30690133 30690169 -219997685 + (TA)n Simple_repeat Simple_repeat 1 36 0 276 253 76 0 chr2 30690199 30690278 -219997576 - L1ME3A LINE L1 -665 5499 5415 333 280 42 56 chr2 30690287 30690430 -219997424 - MIR3 SINE MIR -4 204 64 233 246 116 0 chr2 30690584 30690653 -219997201 + MIR SINE MIR 27 103 -159 1053 154 53 14 chr2 30690653 30690861 -219996993 + MLT2C2 LTR ERVL 1 216 -248 2509 108 24 16 chr2 30691323 30691695 -219996159 + THE1C LTR MaLR 1 375 0 352 324 14 14 chr2 30692001 30692146 -219995708 - MIR3 SINE MIR -11 197 53 575 94 12 0 chr2 30692255 30692340 -219995514 - L1MC2 LINE L1 -149 6195 6110 2000 124 0 0 chr2 30692340 30692658 -219995196 - AluSx SINE Alu 0 318 1 1072 188 122 41 chr2 30694109 30694128 -219993726 + LTR37A LTR ERV1 1 17 -409 2077 81 7 45 chr2 30694128 30694436 -219993418 + AluSx SINE Alu 1 296 -16 1072 188 122 41 chr2 30694436 30694810 -219993044 + LTR37A LTR ERV1 17 426 0 2564 110 3 43 chr2 30695853 30695921 -219991933 - THE1C LTR MaLR 0 375 306 2307 71 0 0 chr2 30695921 30696216 -219991638 - AluY SINE Alu -16 295 1 2564 110 3 43 chr2 30696216 30696538 -219991316 - THE1C LTR MaLR -69 306 1 584 103 23 0 chr2 30696766 30696853 -219991001 + MER3 DNA MER1_type 21 109 -100 929 199 0 6 chr2 30696853 30697029 -219990825 + AluJb SINE Alu 130 304 -8 42 48 0 0 chr2 30697068 30697131 -219990723 + AT_rich Low_complexity Low_complexity 1 63 0 293 342 88 10 chr2 30697955 30698148 -219989706 + MIR SINE MIR 21 228 -34 204 354 53 9 chr2 30700723 30700836 -219987018 + L2 LINE L2 2634 2751 -563 3374 237 108 33 chr2 30700852 30701480 -219986374 + L1MEc LINE L1 612 1192 -5204 2266 93 0 0 chr2 30701480 30701781 -219986073 + AluY SINE Alu 1 301 -10 3374 237 108 33 chr2 30701781 30702716 -219985138 + L1MEc LINE L1 1192 2292 -4104 287 325 6 0 chr2 30702818 30702984 -219984870 + HAL1 LINE L1 1373 1539 -968 861 147 0 22 chr2 30702989 30703125 -219984729 + FLAM_C SINE Alu 1 133 0 325 349 175 0 chr2 30703133 30703299 -219984555 + L1MEc LINE L1 1543 1737 -4659 333 262 165 40 chr2 30703301 30703706 -219984148 + L1MEc LINE L1 3183 3638 -2577 2009 155 0 0 chr2 30703711 30704021 -219983833 + AluSg SINE Alu 1 310 0 1026 82 62 0 chr2 30704310 30704456 -219983398 + AluSp SINE Alu 149 303 -10 1716 142 58 88 chr2 30704722 30704772 -219983082 + MSTB1 LTR MaLR 1 51 -381 2416 57 0 0 chr2 30704772 30705068 -219982786 - AluY SINE Alu -15 296 1 1716 142 58 88 chr2 30705068 30705462 -219982392 + MSTB1 LTR MaLR 51 432 0 1727 147 28 7 chr2 30706021 30706306 -219981548 + AluJo SINE Alu 1 291 -21 877 107 7 7 chr2 30706343 30706493 -219981361 + (GGAGA)n Simple_repeat Simple_repeat 2 151 0 252 352 39 35 chr2 30706504 30706734 -219981120 + L1M4 LINE L1 4739 4969 -1177 315 289 192 0 chr2 30706856 30707012 -219980842 + L1M4 LINE L1 5205 5390 -756 240 286 87 7 chr2 30707553 30707673 -219980181 + MIR SINE MIR 29 162 -66 1934 101 73 0 chr2 30708519 30708807 -219979047 + AluSx SINE Alu 1 309 -3 275 181 95 114 chr2 30708939 30709044 -219978810 - MIR3 SINE MIR -10 198 96 1339 161 0 0 chr2 30710083 30710301 -219977553 + AluJo SINE Alu 6 223 -89 1961 135 0 7 chr2 30710640 30710943 -219976911 + AluJb SINE Alu 1 301 -11 25 51 0 0 chr2 30713248 30713287 -219974567 + AT_rich Low_complexity Low_complexity 1 39 0 2117 117 0 13 chr2 30713343 30713659 -219974195 - AluSq SINE Alu -1 312 1 256 239 158 83 chr2 30713694 30714054 -219973800 - L1ME4a LINE L1 -90 6031 5645 494 202 202 25 chr2 30714127 30714142 -219973712 - L1ME4a LINE L1 -11 6110 6099 2137 105 3 0 chr2 30714142 30714438 -219973416 - AluSx SINE Alu -15 297 1 494 202 202 25 chr2 30714438 30714665 -219973189 - L1ME4a LINE L1 -22 6099 5825 565 271 31 10 chr2 30714671 30714863 -219972991 - L1ME4a LINE L1 -347 5774 5579 252 271 145 68 chr2 30715578 30715992 -219971862 - L2 LINE L2 0 3272 2827 387 301 0 23 chr2 30716048 30716181 -219971673 - MER94 DNA DNA -1 133 4 326 269 48 0 chr2 30717265 30717369 -219970485 - MIR SINE MIR -122 140 32 338 265 53 37 chr2 30718073 30718251 -219969603 - L1MC/D LINE L1 -322 5833 5702 238 284 49 25 chr2 30719334 30719415 -219968439 + L3 LINE CR1 1494 1576 -1 621 256 70 62 chr2 30719635 30719700 -219968154 - MIR SINE MIR 0 262 199 2144 106 0 3 chr2 30719700 30720001 -219967853 - AluSg SINE Alu -10 300 1 621 256 70 62 chr2 30720001 30720193 -219967661 - MIR SINE MIR -63 199 3 947 254 187 36 chr2 30720663 30721880 -219965974 + L1ME3A LINE L1 4610 5953 -217 700 245 19 0 chr2 30722116 30722271 -219965583 + MLT1I LTR MaLR 1 158 -251 251 154 173 0 chr2 30722405 30722457 -219965397 + MLT1I LTR MaLR 340 400 -9 437 240 188 19 chr2 30723631 30723785 -219964069 - MER5A DNA MER1_type 0 189 10 311 270 0 50 chr2 30723893 30723993 -219963861 - MIR SINE MIR -64 198 104 311 355 32 26 chr2 30725685 30725840 -219962014 + MIR3 SINE MIR 24 179 -29 755 345 41 3 chr2 30725924 30726266 -219961588 + LTR16A LTR ERVL 1 355 -95 194 229 21 0 chr2 30727409 30727457 -219960397 - MIR SINE MIR -63 145 97 759 52 0 0 chr2 30728246 30728342 -219959512 + (GGAA)n Simple_repeat Simple_repeat 1 96 0 266 312 138 0 chr2 30729195 30729333 -219958521 + L2 LINE L2 2896 3052 -220 453 259 19 0 chr2 30729337 30729445 -219958409 - L2 LINE L2 -3 3269 3160 2422 70 10 6 chr2 30729742 30730054 -219957800 - AluSq SINE Alu 0 313 1 2242 113 0 7 chr2 30732030 30732331 -219955523 - AluSx SINE Alu -13 299 1 364 350 35 0 chr2 30732336 30732479 -219955375 + MIR SINE MIR 54 201 -61 1966 148 3 3 chr2 30732670 30732961 -219954893 - AluJb SINE Alu -21 291 1 634 298 31 11 chr2 30733399 30733590 -219954264 + MIR3 SINE MIR 8 202 -6 232 296 43 52 chr2 30733579 30733694 -219954160 + MIR SINE MIR 90 203 -59 * 430 255 0 0 chr2 30733784 30733882 -219953972 + MIR SINE MIR 49 146 -62 2175 100 21 4 chr2 30734046 30734367 -219953487 - AluSq SINE Alu 0 326 1 251 320 0 27 chr2 30736475 30736550 -219951304 + L3 LINE CR1 877 949 -628 4724 179 62 80 chr2 30736692 30737594 -219950260 + Charlie1a DNA MER1_type 42 910 -1851 1730 164 27 10 chr2 30737594 30737886 -219949968 + AluJo SINE Alu 1 297 -15 4724 179 62 80 chr2 30737886 30738423 -219949431 + Charlie1a DNA MER1_type 910 1455 0 2110 135 20 0 chr2 30738457 30738754 -219949100 + AluSx SINE Alu 1 303 -9 197 314 41 87 chr2 30738758 30738930 -219948924 + L3 LINE CR1 1175 1338 -239 447 272 72 14 chr2 30738940 30739105 -219948749 - MIR SINE MIR -61 147 8 242 351 101 7 chr2 30739098 30739246 -219948608 + L3 LINE CR1 1416 1577 0 * 1136 175 112 32 chr2 30739347 30739786 -219948068 - Charlie2 DNA MER1_type -129 2733 2260 2048 134 10 13 chr2 30739789 30740094 -219947760 - AluJo SINE Alu -8 304 1 610 295 49 31 chr2 30741185 30741409 -219946445 + MIR SINE MIR 34 261 -1 25 31 0 0 chr2 30742295 30742327 -219945527 + AT_rich Low_complexity Low_complexity 1 32 0 1699 75 0 5 chr2 30745506 30745720 -219942134 - AluSg/x SINE Alu -8 304 92 192 143 95 0 chr2 30746383 30746425 -219941429 + MIR SINE MIR 100 145 -117 182 327 18 0 chr2 30746456 30746511 -219941343 + MIR SINE MIR 18 73 -135 420 278 0 9 chr2 30747345 30747453 -219940401 + MIR3 SINE MIR 69 175 -33 2119 106 3 32 chr2 30747957 30748268 -219939586 - AluY SINE Alu -9 302 1 199 259 0 0 chr2 30748737 30748791 -219939063 + L2 LINE L2 3197 3250 -22 201 121 0 0 chr2 30749213 30749246 -219938608 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 192 233 47 0 chr2 30751748 30751791 -219936063 - L2 LINE L2 -6 3307 3263 279 301 68 25 chr2 30752123 30752286 -219935568 - L2 LINE L2 -575 2739 2570 3119 201 41 10 chr2 30752575 30752722 -219935132 + L1M4 LINE L1 4194 4335 -1811 2198 50 36 0 chr2 30752722 30753003 -219934851 + L1PA8 LINE L1 5882 6172 0 3119 201 41 10 chr2 30753003 30753583 -219934271 + L1M4 LINE L1 4335 4944 -1202 328 290 48 8 chr2 30753805 30753929 -219933925 + MIR SINE MIR 47 175 -87 433 331 49 16 chr2 30754241 30754425 -219933429 - L2 LINE L2 -269 3044 2855 987 261 55 0 chr2 30754718 30754956 -219932898 + MIR SINE MIR 11 261 -1 2478 90 3 0 chr2 30754958 30755268 -219932586 + AluSp SINE Alu 1 311 -2 2591 66 0 0 chr2 30755276 30755581 -219932273 + AluY SINE Alu 1 305 -6 2128 155 104 34 chr2 30755591 30756063 -219931791 + MLT1D LTR MaLR 1 505 0 184 269 30 60 chr2 30756097 30756164 -219931690 + L3 LINE CR1 1288 1352 -225 554 254 0 36 chr2 30756857 30757022 -219930832 - MER112 DNA MER1_type -101 159 1 2245 139 93 15 chr2 30757971 30758367 -219929487 - MSTA LTR MaLR -1 427 1 1573 228 45 37 chr2 30758613 30759104 -219928750 + Charlie4a DNA MER1_type 7 501 -7 334 257 9 19 chr2 30759537 30759642 -219928212 + MER81 DNA DNA 2 105 -9 6325 66 12 3 chr2 30759844 30760617 -219927237 + LTR17 LTR ERV1 1 780 0 649 221 134 0 chr2 30760674 30760891 -219926963 - L1ME3 LINE L1 -5 6157 5912 198 250 0 58 chr2 30761098 30761150 -219926704 - MIR SINE MIR -111 97 49 731 231 23 8 chr2 30761303 30761478 -219926376 + MER5B DNA MER1_type 2 186 -3 441 235 183 20 chr2 30761485 30761541 -219926313 - MER5A DNA MER1_type -6 183 137 2509 55 0 45 chr2 30761541 30761853 -219926001 + AluY SINE Alu 1 298 -13 441 235 183 20 chr2 30761853 30761949 -219925905 - MER5A DNA MER1_type -52 137 6 2163 215 38 14 chr2 30762789 30763246 -219924608 + MLT2B1 LTR ERVL 1 472 -48 213 39 0 0 chr2 30763246 30763272 -219924582 + (TG)n Simple_repeat Simple_repeat 2 27 0 2163 215 38 14 chr2 30763272 30763311 -219924543 + MLT2B1 LTR ERVL 472 509 -11 507 234 91 63 chr2 30763616 30763791 -219924063 + MIR SINE MIR 14 193 -69 2512 63 0 0 chr2 30765067 30765369 -219922485 - AluY SINE Alu -9 302 1 893 103 48 0 chr2 30766078 30766224 -219921630 - L1MB4 LINE L1 0 6180 6028 1701 197 6 3 chr2 30766227 30766582 -219921272 - L1MB4 LINE L1 -215 5965 5610 2593 77 0 0 chr2 30766582 30766893 -219920961 - AluY SINE Alu 0 311 1 304 145 58 29 chr2 30767039 30767108 -219920746 + MER96 DNA MER1_type? 1 71 -104 698 179 166 64 chr2 30767133 30767368 -219920486 - ORSL DNA AcHobo -8 267 9 665 262 0 0 chr2 30767400 30767549 -219920305 - MER96 DNA MER1_type? -24 151 3 516 179 125 9 chr2 30768086 30768198 -219919656 - L2 LINE L2 -4 3309 3185 529 260 66 48 chr2 30768307 30768534 -219919320 - L2 LINE L2 -123 3190 2960 1917 248 59 33 chr2 30768748 30769324 -219918530 + MLT1E LTR MaLR 3 593 0 954 297 148 65 chr2 30769369 30770338 -219917516 + L2 LINE L2 1212 2286 -1028 2291 107 3 7 chr2 30770338 30770647 -219917207 - AluSx SINE Alu -4 308 1 954 297 148 65 chr2 30770647 30770791 -219917063 + L2 LINE L2 2286 2417 -897 391 209 19 0 chr2 30770931 30771036 -219916818 + CT-rich Low_complexity Low_complexity 2 108 0 613 242 16 71 chr2 30771063 30771101 -219916753 + MER5B DNA MER1_type 7 46 -132 2577 43 0 23 chr2 30771101 30771404 -219916450 + AluY SINE Alu 1 296 -15 613 242 16 71 chr2 30771404 30771547 -219916307 + MER5B DNA MER1_type 46 178 0 533 292 180 43 chr2 30771547 30772140 -219915714 + L2 LINE L2 2620 3312 -1 261 286 26 103 chr2 30772172 30772406 -219915448 + L2 LINE L2 2941 3156 -116 329 279 25 0 chr2 30775694 30775773 -219912081 - L1MEc LINE L1 -3967 2429 2349 2141 146 0 0 chr2 30775773 30776081 -219911773 - AluSx SINE Alu -4 308 1 2216 114 17 0 chr2 30776189 30776487 -219911367 + AluSq SINE Alu 5 307 -6 1044 158 0 0 chr2 30776487 30776639 -219911215 + AluSg/x SINE Alu 134 285 -27 224 313 133 7 chr2 30776641 30776791 -219911063 - L2 LINE L2 -960 2354 2186 310 347 138 0 chr2 30777428 30777624 -219910230 + MIR SINE MIR 19 241 -21 * 694 257 24 34 chr2 30777616 30777822 -219910032 - MIR SINE MIR -2 260 57 515 226 189 0 chr2 30777864 30777893 -219909961 + MER5A DNA MER1_type 1 23 -166 201 74 0 0 chr2 30777893 30777920 -219909934 + (CAG)n Simple_repeat Simple_repeat 1 27 0 515 226 189 0 chr2 30777920 30778049 -219909805 + MER5A DNA MER1_type 23 189 0 938 144 0 0 chr2 30778174 30778313 -219909541 - FLAM_C SINE Alu -4 139 1 227 310 50 40 chr2 30778317 30778417 -219909437 - MIR3 SINE MIR -31 177 77 3806 80 20 0 chr2 30778886 30779387 -219908467 - LTR10D LTR ERV1 0 513 3 311 361 41 12 chr2 30780281 30780450 -219907404 + MIR SINE MIR 15 188 -74 228 255 235 0 chr2 30781504 30781606 -219906248 + L2 LINE L2 3188 3313 0 2898 214 60 59 chr2 30781713 30782499 -219905355 - L1MC3 LINE L1 -749 5397 5362 2638 62 3 0 chr2 30782499 30782805 -219905049 - AluSp SINE Alu -6 307 1 2898 214 60 59 chr2 30782805 30783656 -219904198 - L1MC3 LINE L1 -784 5362 4514 26 0 0 0 chr2 30883814 30883840 -219804014 + AT_rich Low_complexity Low_complexity 1 26 0 412 347 0 12 chr2 30885084 30885254 -219802600 - L3 LINE CR1 -121 1456 1289 913 196 16 5 chr2 30885458 30885642 -219802212 - MLT1C LTR MaLR 0 467 282 536 257 55 9 chr2 30886069 30886343 -219801511 - L1MD3 LINE L1 -1 7994 6023 245 230 101 36 chr2 30886852 30886991 -219800863 + HAL1 LINE L1 1950 2097 -410 497 208 94 52 chr2 30887025 30887179 -219800675 + L1MDa LINE L1 2419 2584 -3956 2218 102 10 0 chr2 30887179 30887473 -219800381 - AluY SINE Alu -14 297 1 497 208 94 52 chr2 30887473 30887510 -219800344 + L1MDa LINE L1 2584 2618 -3922 1042 218 62 38 chr2 30887510 30887799 -219800055 + MER82 DNA MER2_type 2 297 -356 207 322 34 42 chr2 30888280 30888398 -219799456 - MIR SINE MIR -133 129 13 344 331 105 57 chr2 30889215 30889323 -219798531 + L2 LINE L2 2465 2566 -747 1850 237 41 26 chr2 30889323 30889813 -219798041 - MLT1D LTR MaLR -4 501 5 344 331 105 57 chr2 30889813 30890522 -219797332 + L2 LINE L2 2566 3311 -2 566 155 7 92 chr2 30890628 30890770 -219797084 - THE1C LTR MaLR -19 356 227 22 70 0 0 chr2 30890897 30890940 -219796914 + GC_rich Low_complexity Low_complexity 1 43 0 1424 157 105 49 chr2 30891268 30891592 -219796262 + MER66A LTR ERV1 137 478 0 2028 171 53 29 chr2 30891592 30892043 -219795811 + L1MB8 LINE L1 5701 6162 -16 336 252 129 14 chr2 30892247 30892386 -219795468 + L1ME4a LINE L1 5966 6120 -1 1271 146 5 33 chr2 30892725 30892937 -219794917 - AluSg/x SINE Alu -16 296 91 2969 129 16 26 chr2 30893099 30893291 -219794563 - LOR1a LTR ERV1 0 497 305 405 0 0 0 chr2 30893291 30893336 -219794518 + (CA)n Simple_repeat Simple_repeat 2 46 0 2969 129 16 26 chr2 30893336 30893645 -219794209 - LOR1a LTR ERV1 -192 305 1 189 271 0 0 chr2 30894798 30894846 -219793008 - L3 LINE CR1 -6 1571 1524 2350 73 7 3 chr2 30894931 30895231 -219792623 + AluSx SINE Alu 1 301 -11 465 237 63 139 chr2 30895780 30896210 -219791644 - L1ME3A LINE L1 -7 6163 5767 1080 265 115 58 chr2 30897691 30898802 -219789052 - L1ME3A LINE L1 -2099 4047 2857 216 0 0 0 chr2 30898802 30898826 -219789028 + (TG)n Simple_repeat Simple_repeat 2 25 0 1080 265 115 58 chr2 30898826 30898951 -219788903 - L1ME3A LINE L1 -3289 2857 2741 233 229 0 14 chr2 30898985 30899055 -219788799 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 709 120 0 0 chr2 30899834 30899934 -219787920 + AluSp/q SINE Alu 194 293 -20 284 187 13 173 chr2 30899934 30900084 -219787770 - LTR41 LTR ERVL -63 710 585 672 237 0 53 chr2 30900338 30900528 -219787326 - LTR41 LTR ERVL -593 180 1 205 292 84 26 chr2 30900528 30900682 -219787172 - MIR SINE MIR -25 237 75 2155 115 7 0 chr2 30900754 30901050 -219786804 + AluSx SINE Alu 1 298 -14 319 262 77 36 chr2 30901253 30901394 -219786460 - MER5A DNA MER1_type -27 162 4 1183 197 33 12 chr2 30902865 30903109 -219784745 + L1MC1 LINE L1 6084 6332 -1 204 288 55 14 chr2 30903127 30903200 -219784654 + MIR SINE MIR 159 234 -28 325 261 90 0 chr2 30903633 30903744 -219784110 + MIR3 SINE MIR 12 132 -76 2469 84 0 0 chr2 30903838 30904149 -219783705 - AluY SINE Alu 0 311 1 421 302 20 7 chr2 30904609 30904758 -219783096 + MIR SINE MIR 53 203 -59 277 286 10 0 chr2 30905940 30906038 -219781816 + MIR SINE MIR 117 215 -47 1343 290 52 38 chr2 30907387 30908077 -219779777 + L1MC4a LINE L1 5348 6047 -1761 623 264 39 0 chr2 30908356 30908538 -219779316 + L1ME1 LINE L1 24 212 -6211 3157 248 74 45 chr2 30908949 30910879 -219776975 + L1ME1 LINE L1 791 2665 -4276 1888 185 5 78 chr2 30910879 30911300 -219776554 + MLT1B LTR MaLR 1 390 0 3157 248 74 45 chr2 30911300 30912271 -219775583 + L1ME1 LINE L1 2665 3947 -2994 2268 120 0 0 chr2 30912271 30912579 -219775275 + AluSq SINE Alu 1 308 -5 3157 248 74 45 chr2 30912579 30912691 -219775163 + L1ME1 LINE L1 3947 4054 -2887 3183 209 77 38 chr2 30912735 30913657 -219774197 + L1ME1 LINE L1 5229 6114 -847 2162 116 10 0 chr2 30913657 30913951 -219773903 + AluSx SINE Alu 3 299 -13 3183 209 77 38 chr2 30913951 30914068 -219773786 + L1ME1 LINE L1 6114 6225 -736 7927 52 37 1 chr2 30914068 30914355 -219773499 - LTR13 LTR ERVK 0 1007 732 222 37 0 0 chr2 30914355 30914382 -219773472 + (GA)n Simple_repeat Simple_repeat 2 28 0 7927 52 37 1 chr2 30914382 30915066 -219772788 - LTR13 LTR ERVK -275 732 1 3183 209 77 38 chr2 30915066 30915686 -219772168 + L1ME1 LINE L1 6225 6953 -8 190 316 79 0 chr2 30915742 30915818 -219772036 - MIR SINE MIR -161 101 20 446 287 41 26 chr2 30915855 30916050 -219771804 - MIR SINE MIR -6 256 59 269 296 118 25 chr2 30916689 30916892 -219770962 - L3 LINE CR1 -714 863 642 225 211 0 0 chr2 30917144 30917196 -219770658 + (TG)n Simple_repeat Simple_repeat 1 52 0 298 318 56 8 chr2 30917912 30918038 -219769816 - MIR SINE MIR -76 186 55 1130 219 162 21 chr2 30918422 30918583 -219769271 - MLT1A2 LTR MaLR 0 374 237 896 8 33 0 chr2 30918583 30918704 -219769150 + (GA)n Simple_repeat Simple_repeat 2 126 0 1130 219 162 21 chr2 30918704 30918870 -219768984 - MLT1A2 LTR MaLR -137 237 1 2086 195 72 9 chr2 30918941 30919388 -219768466 - MLT1D LTR MaLR -2 503 29 180 263 35 0 chr2 30922173 30922230 -219765624 - MIR SINE MIR -80 182 124 1796 206 52 14 chr2 30923255 30923693 -219764161 + Charlie4a DNA MER1_type 16 470 -38 2403 104 0 0 chr2 30923841 30924148 -219763706 + AluSx SINE Alu 1 307 -5 2118 115 7 3 chr2 30924548 30924843 -219763011 + AluSq SINE Alu 1 296 -17 319 296 197 0 chr2 30924888 30925091 -219762763 + MIR SINE MIR 8 250 -12 488 243 33 66 chr2 30925516 30925697 -219762157 + MER69A DNA AcHobo 3 177 0 240 259 0 47 chr2 30927100 30927185 -219760669 + MER5A DNA MER1_type 8 88 -101 1875 115 50 70 chr2 30928526 30928909 -219758945 + THE1C LTR MaLR 1 375 0 2330 100 0 0 chr2 30929956 30930266 -219757588 + AluSg SINE Alu 1 310 0 193 338 52 0 chr2 30930402 30930479 -219757375 - MIR SINE MIR -121 141 61 2276 123 71 66 chr2 30930659 30931083 -219756771 + MSTB LTR MaLR 1 426 0 1147 209 171 40 chr2 30931225 30931647 -219756207 - MLT1D LTR MaLR -10 495 19 691 197 15 0 chr2 30931670 30931802 -219756052 + Zaphod DNA AcHobo 3892 4025 -6 208 336 100 7 chr2 30932459 30932599 -219755255 - MIR3 SINE MIR -40 168 16 270 271 108 23 chr2 30932809 30932938 -219754916 - MIR SINE MIR -6 256 117 283 323 39 15 chr2 30932967 30933097 -219754757 - MIR SINE MIR 0 262 130 330 239 14 0 chr2 30934250 30934321 -219753533 + MER58 DNA MER1_type 2345 2416 -4 1038 274 80 23 chr2 30934445 30935091 -219752763 - L1ME LINE L1 -365 5797 5079 1556 164 11 18 chr2 30935095 30935381 -219752473 + AluJb SINE Alu 19 302 -10 495 266 41 35 chr2 30935694 30935984 -219751870 - L1ME LINE L1 -1470 4676 4385 2038 119 3 3 chr2 30936378 30936673 -219751181 + AluSx SINE Alu 1 295 -17 2249 64 0 0 chr2 30936723 30937027 -219750827 + AluY SINE Alu 1 304 0 1170 287 114 50 chr2 30937111 30938555 -219749299 - L1ME LINE L1 -1911 4235 2700 215 235 0 15 chr2 30938555 30938623 -219749231 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 361 256 11 107 chr2 30938855 30939125 -219748729 - L1ME LINE L1 -3788 2358 2115 3039 194 47 78 chr2 30939190 30939998 -219747856 - L1ME1 LINE L1 -5 6161 5416 2101 73 84 0 chr2 30939998 30940285 -219747569 - AluY SINE Alu 0 311 1 3039 194 47 78 chr2 30940285 30940808 -219747046 - L1ME1 LINE L1 -750 5416 4878 2355 263 100 61 chr2 30940835 30942220 -219745634 + L1MCc LINE L1 365 2081 -5041 2075 134 0 3 chr2 30942220 30942533 -219745321 + AluSx SINE Alu 1 312 0 2355 263 100 61 chr2 30942533 30943239 -219744615 + L1MCc LINE L1 2081 2758 -4364 982 310 146 45 chr2 30943595 30943832 -219744022 + L1MCc LINE L1 2716 2928 -4013 1752 143 7 52 chr2 30943832 30944139 -219743715 + AluSx SINE Alu 1 293 -19 982 310 146 45 chr2 30944139 30945291 -219742563 + L1MCc LINE L1 2928 4199 -2742 1000 200 133 105 chr2 30945296 30945686 -219742168 - MER57A LTR ERV1 0 403 3 195 42 0 0 chr2 30947020 30947044 -219740810 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 1655 170 49 46 chr2 30947204 30947551 -219740303 - MLT1A1 LTR MaLR 0 365 18 588 326 21 0 chr2 30948241 30948428 -219739426 - Charlie8 DNA MER1_type -2152 265 75 270 304 42 98 chr2 30948542 30948878 -219738976 + L2 LINE L2 2870 3186 -86 283 305 55 16 chr2 30950020 30950148 -219737706 - L2 LINE L2 -2 3311 3179 217 143 0 48 chr2 30952170 30952212 -219735642 + MIR SINE MIR 219 258 -4 * 247 259 0 0 chr2 30952207 30952261 -219735593 + MIR SINE MIR 81 134 -74 334 287 40 40 chr2 30952905 30953006 -219734848 - MIR SINE MIR -72 190 90 1796 261 5 34 chr2 30953592 30954006 -219733848 - MLT2E LTR ERVL -226 402 1 244 234 206 50 chr2 30954006 30954147 -219733707 + MIR SINE MIR 83 245 -17 2800 83 13 5 chr2 30954149 30954521 -219733333 + THE1C LTR MaLR 1 375 0 189 158 26 0 chr2 30954543 30954581 -219733273 + L2 LINE L2 3234 3272 0 1860 146 7 3 chr2 30954810 30955119 -219732735 + AluSx SINE Alu 1 310 -2 255 170 0 0 chr2 30955121 30955168 -219732686 + GA-rich Low_complexity Low_complexity 3 49 0 231 311 148 16 chr2 30955177 30955299 -219732555 + MIR3 SINE MIR 42 179 -29 416 259 132 57 chr2 30955549 30955761 -219732093 - MIR SINE MIR -11 251 24 391 284 116 64 chr2 30956501 30956751 -219731103 + L2 LINE L2 2630 2892 -422 211 277 85 31 chr2 30956955 30957085 -219730769 - MIR3 SINE MIR -27 181 45 737 200 0 53 chr2 30957632 30957802 -219730052 + MIR SINE MIR 16 176 -86 579 255 181 33 chr2 30957899 30958205 -219729649 + MLT1G1 LTR MaLR 183 595 0 293 277 50 20 chr2 30958205 30958306 -219729548 + MIR SINE MIR 159 262 0 182 328 16 0 chr2 30958316 30958377 -219729477 - MIR SINE MIR -71 191 130 264 275 12 12 chr2 30958443 30958523 -219729331 - MIR SINE MIR -134 128 49 196 290 87 0 chr2 30958656 30958725 -219729129 + MIR SINE MIR 77 151 -111 893 144 0 0 chr2 30958800 30958932 -219728922 - FLAM_C SINE Alu -1 132 1 357 315 9 9 chr2 30959435 30959543 -219728311 - L2 LINE L2 -285 3028 2921 2876 195 98 6 chr2 30959543 30960360 -219727494 - L1MC4a LINE L1 -62 7807 6842 244 368 9 0 chr2 30960387 30960493 -219727361 - MER5B DNA MER1_type -71 107 1 * 363 253 31 69 chr2 30960493 30960643 -219727211 - MIR3 SINE MIR -60 148 18 1576 189 45 57 chr2 30960706 30961267 -219726587 + Charlie1b DNA MER1_type 17 512 -11 244 245 0 0 chr2 30962213 30962262 -219725592 + MER5B DNA MER1_type 127 175 -3 884 200 73 0 chr2 30962306 30962471 -219725383 - MER45A DNA AcHobo -1 177 1 180 0 0 0 chr2 30963287 30963307 -219724547 + (T)n Simple_repeat Simple_repeat 1 20 0 1961 106 35 0 chr2 30963370 30963652 -219724202 - AluSx SINE Alu -20 292 1 238 167 0 0 chr2 30963785 30963827 -219724027 - MIR SINE MIR -63 145 104 539 266 43 0 chr2 30963857 30963996 -219723858 + MER5B DNA MER1_type 13 157 -21 183 161 0 0 chr2 30964347 30964378 -219723476 + L2 LINE L2 701 731 -2583 848 150 66 70 chr2 30964581 30964794 -219723060 - L1MB2 LINE L1 -268 5903 5692 381 299 63 54 chr2 30964814 30965035 -219722819 - L1MC/D LINE L1 -2018 5790 5568 100 0 0 9 chr2 30965210 30965227 -219722627 + AT_rich Low_complexity Low_complexity 1 17 -93 2129 112 0 0 chr2 30965227 30965514 -219722340 - AluSx SINE Alu -25 287 1 100 0 0 9 chr2 30965514 30965607 -219722247 + AT_rich Low_complexity Low_complexity 17 110 0 359 279 196 39 chr2 30966697 30967034 -219720820 + MLT1K LTR MaLR 2 391 -197 247 315 154 6 chr2 30967687 30967849 -219720005 + MLT1K LTR MaLR 397 582 -6 252 77 0 0 chr2 30969049 30969088 -219718766 + (AGGTG)n Simple_repeat Simple_repeat 1 39 0 240 111 0 0 chr2 30969782 30969818 -219718036 + (A)n Simple_repeat Simple_repeat 1 36 0 255 61 0 0 chr2 30970281 30970314 -219717540 + (A)n Simple_repeat Simple_repeat 1 33 0 567 210 50 0 chr2 30972621 30972740 -219715114 + FLAM_A SINE Alu 13 137 -5 215 289 96 58 chr2 30972837 30972941 -219714913 - L2 LINE L2 -41 3231 3124 260 337 114 37 chr2 30973142 30973492 -219714362 - L2 LINE L2 -555 2759 2383 * 290 284 184 0 chr2 30973487 30973596 -219714258 - MIR3 SINE MIR -14 194 66 749 228 84 10 chr2 30973684 30973886 -219713968 + L1ME2 LINE L1 5939 6155 -9 184 288 34 0 chr2 30974240 30974299 -219713555 + L3 LINE CR1 1265 1325 -252 2319 81 0 0 chr2 30974299 30974594 -219713260 + AluSq SINE Alu 1 295 -18 373 153 339 32 chr2 30975624 30975748 -219712106 + MIR SINE MIR 28 189 -73 221 95 0 48 chr2 30976310 30976352 -219711502 + (GGGA)n Simple_repeat Simple_repeat 1 40 0 220 254 36 145 chr2 30977216 30977354 -219710500 - L2 LINE L2 -7 3265 3143 503 343 149 28 chr2 30979666 30980587 -219707267 - L2 LINE L2 -29 3243 2211 236 308 64 30 chr2 30982358 30982513 -219705341 + MIR SINE MIR 3 164 -76 181 300 130 30 chr2 30983637 30983737 -219704117 - MIR SINE MIR -56 152 43 544 245 138 0 chr2 30984269 30984428 -219703426 + MER5A DNA MER1_type 9 189 0 3822 80 19 13 chr2 30984632 30985160 -219702694 - L1PA14 LINE L1 -9 6152 5622 400 220 110 28 chr2 30985352 30985461 -219702393 - MIR SINE MIR -60 148 31 1225 162 44 9 chr2 30985712 30985940 -219701914 - MER46A DNA MER2_type 0 236 1 261 231 66 99 chr2 30985992 30986113 -219701741 - MIR SINE MIR -60 148 32 263 314 86 0 chr2 30987798 30987903 -219699951 + MIR SINE MIR 99 212 -50 2061 123 13 0 chr2 30988901 30989203 -219698651 + AluSx SINE Alu 1 306 -6 198 236 281 0 chr2 30991936 30992025 -219695829 - L2 LINE L2 -155 3117 3004 366 271 83 14 chr2 30992329 30992473 -219695381 - MER117 DNA MER1_type -38 159 6 298 283 97 0 chr2 30994058 30994171 -219693683 + L2 LINE L2 3144 3267 -5 399 299 108 0 chr2 30994406 30994563 -219693291 - MER91A DNA MER1_type -1 195 22 2188 110 0 0 chr2 30994706 30995014 -219692840 + AluSg SINE Alu 2 309 -1 308 127 18 0 chr2 30996184 30996239 -219691615 + (CA)n Simple_repeat Simple_repeat 1 56 0 421 280 105 17 chr2 30997039 30997091 -219690763 - MIR SINE MIR -1 261 215 360 0 0 0 chr2 30997091 30997131 -219690723 + (TG)n Simple_repeat Simple_repeat 2 41 0 421 280 105 17 chr2 30997131 30997317 -219690537 - MIR SINE MIR -47 215 2 218 242 47 94 chr2 30997805 30997933 -219689921 + L2 LINE L2 2684 2805 -509 190 315 188 13 chr2 30998904 30999053 -219688801 + L2 LINE L2 2652 2826 -488 218 287 129 0 chr2 30999484 30999585 -219688269 + L2 LINE L2 3158 3271 -1 204 297 108 47 chr2 30999750 30999898 -219687956 + MIR3 SINE MIR 7 163 -45 1031 256 20 16 chr2 31000026 31000272 -219687582 - MIR SINE MIR -9 253 7 709 128 120 8 chr2 31001468 31001601 -219686253 - MER5A DNA MER1_type -40 149 2 336 302 74 7 chr2 31004736 31004885 -219682969 + MIR3 SINE MIR 35 193 -15 498 284 103 17 chr2 31004954 31005186 -219682668 - L3 LINE CR1 -113 1464 1213 232 314 151 21 chr2 31005959 31006198 -219681656 + L2 LINE L2 1528 1797 -1517 434 351 52 30 chr2 31006204 31006606 -219681248 + L2 LINE L2 2551 2961 -353 5130 197 45 12 chr2 31006745 31008889 -219678965 - L1MB8 LINE L1 -1 6177 3958 321 281 53 35 chr2 31010054 31010168 -219677686 + MER91B DNA MER1_type 75 190 0 1413 257 137 25 chr2 31010531 31011215 -219676639 + HAL1 LINE L1 1720 2480 -27 19202 50 0 2 chr2 31013978 31017153 -219670701 + L1PA5 LINE L1 2967 6153 -1 252 154 11 165 chr2 31017416 31017507 -219670347 - LTR33A LTR ERVL 0 523 447 279 321 152 18 chr2 31018255 31018420 -219669434 - MER5A DNA MER1_type -2 187 1 2194 86 6 16 chr2 31019027 31019341 -219668513 - AluSq SINE Alu -2 311 1 209 319 69 14 chr2 31020184 31020256 -219667598 + L2 LINE L2 3197 3272 0 558 246 64 23 chr2 31020295 31020466 -219667388 + MIR3 SINE MIR 3 180 -28 378 0 0 0 chr2 31020742 31020784 -219667070 + (A)n Simple_repeat Simple_repeat 1 42 0 180 313 0 30 chr2 31020941 31021008 -219666846 + MIR SINE MIR 34 98 -110 1148 50 0 0 chr2 31021662 31021803 -219666051 - AluY SINE Alu -18 293 153 1958 126 27 0 chr2 31022160 31022454 -219665400 + AluSx SINE Alu 1 302 -10 472 210 55 105 chr2 31022505 31022584 -219665270 - LTR50 LTR ERVL 0 795 714 2130 110 3 0 chr2 31022584 31022876 -219664978 + AluSq SINE Alu 1 293 -20 472 210 55 105 chr2 31022876 31023034 -219664820 - LTR50 LTR ERVL -81 714 570 229 200 67 0 chr2 31023795 31023870 -219663984 + (TATAA)n Simple_repeat Simple_repeat 5 84 0 355 292 101 82 chr2 31025558 31025914 -219661940 - L2 LINE L2 -19 3253 2891 1323 140 0 10 chr2 31026790 31026997 -219660857 - AluSg/x SINE Alu -23 289 85 252 325 0 0 chr2 31027097 31027174 -219660680 - L2 LINE L2 -15 3298 3222 424 355 92 46 chr2 31027378 31027812 -219660042 - L2 LINE L2 -428 2886 2433 232 312 65 11 chr2 31028278 31028371 -219659483 + MIR SINE MIR 11 108 -154 382 275 37 18 chr2 31028469 31028578 -219659276 - MER5B DNA MER1_type -61 117 7 252 253 67 13 chr2 31029938 31030013 -219657841 + MIR3 SINE MIR 109 187 -21 456 309 60 12 chr2 31030370 31030489 -219657365 + MIR SINE MIR 86 257 -1 222 267 0 0 chr2 31030489 31030534 -219657320 + L2 LINE L2 3217 3261 -11 24 0 0 0 chr2 31030559 31030583 -219657271 + AT_rich Low_complexity Low_complexity 1 24 0 237 65 0 0 chr2 31032044 31032075 -219655779 + (T)n Simple_repeat Simple_repeat 1 31 0 2363 94 0 0 chr2 31032133 31032442 -219655412 + AluY SINE Alu 1 309 -2 1814 259 43 13 chr2 31033065 31033605 -219654249 - LTR38 LTR ERV1 0 556 1 21 82 0 0 chr2 31033768 31033817 -219654037 + AT_rich Low_complexity Low_complexity 1 49 0 895 299 53 38 chr2 31034872 31035270 -219652584 + L2 LINE L2 2816 3219 -94 2030 162 19 65 chr2 31035405 31035837 -219652017 + MLT2D LTR ERVL 1 412 -2 292 270 127 8 chr2 31035915 31036041 -219651813 + L1ME4a LINE L1 5967 6107 -14 23 0 0 0 chr2 31036764 31036787 -219651067 + AT_rich Low_complexity Low_complexity 1 23 0 576 118 129 0 chr2 31037793 31037886 -219649968 + FRAM SINE Alu 62 166 -10 323 269 45 135 chr2 31038330 31038408 -219649446 + MIR3 SINE MIR 28 111 -97 195 42 0 0 chr2 31038408 31038432 -219649422 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 637 219 0 0 chr2 31038435 31038549 -219649305 - FLAM_A SINE Alu -18 115 2 323 269 45 135 chr2 31038549 31038622 -219649232 + MIR3 SINE MIR 113 169 -39 2377 90 0 3 chr2 31039697 31039998 -219647856 + AluSq SINE Alu 1 300 -13 1884 124 7 49 chr2 31040303 31040610 -219647244 + AluSx SINE Alu 1 294 -18 383 0 21 0 chr2 31040614 31040661 -219647193 + (CA)n Simple_repeat Simple_repeat 2 49 0 1675 267 90 60 chr2 31041583 31042321 -219645533 - L1ME3 LINE L1 -2 6160 5392 2400 90 7 0 chr2 31042321 31042622 -219645232 - AluSx SINE Alu -9 303 1 1675 267 90 60 chr2 31042622 31042727 -219645127 - L1ME3 LINE L1 -770 5392 5292 562 291 23 18 chr2 31042814 31043034 -219644820 - L1ME3 LINE L1 -1028 5118 4898 22 35 0 0 chr2 31043040 31043069 -219644785 + AT_rich Low_complexity Low_complexity 1 29 0 2319 101 0 0 chr2 31043225 31043522 -219644332 + AluSq SINE Alu 1 297 -16 402 21 0 0 chr2 31043609 31043656 -219644198 + (CA)n Simple_repeat Simple_repeat 1 47 0 397 200 90 38 chr2 31043770 31043896 -219643958 - MER5C DNA MER1_type -30 294 176 2395 70 7 0 chr2 31043896 31044197 -219643657 + AluSp SINE Alu 1 303 -10 397 200 90 38 chr2 31044197 31044294 -219643560 - MER5C DNA MER1_type -148 176 1 986 206 14 28 chr2 31044627 31044845 -219643009 + MER58B DNA MER1_type 117 331 -10 1452 139 165 0 chr2 31044847 31045114 -219642740 + AluJb SINE Alu 2 312 0 559 296 54 50 chr2 31045615 31046094 -219641760 - HAL1 LINE L1 -847 1660 1180 822 254 102 8 chr2 31046261 31046497 -219641357 - MIR SINE MIR -1 261 4 2791 13 0 0 chr2 31047101 31047406 -219640448 - AluYb8 SINE Alu -12 306 2 362 169 0 0 chr2 31048815 31048874 -219638980 + L1MD3 LINE L1 6669 6727 -1268 1076 211 48 81 chr2 31048874 31049419 -219638435 + MLT1D LTR MaLR 1 505 0 3402 225 69 33 chr2 31049419 31049634 -219638220 + L1MC3 LINE L1 6701 6907 -878 1650 146 0 87 chr2 31049634 31049956 -219637898 + AluJo SINE Alu 1 294 -18 3402 225 69 33 chr2 31049956 31050780 -219637074 + L1MC3 LINE L1 6907 7778 -7 5401 91 16 3 chr2 31051982 31052738 -219635116 + MER4E LTR ERV1 1 766 0 356 277 200 29 chr2 31053090 31053440 -219634414 - MLT1L LTR MaLR -10 605 196 22 0 0 0 chr2 31054623 31054645 -219633209 + AT_rich Low_complexity Low_complexity 1 22 0 218 310 42 14 chr2 31056498 31056569 -219631285 + L3 LINE CR1 1501 1573 -4 435 257 20 33 chr2 31056632 31056784 -219631070 + L1ME3A LINE L1 20 169 -5901 3120 263 100 22 chr2 31056873 31058255 -219629599 + L1ME3A LINE L1 2912 4400 -1680 241 208 19 0 chr2 31058393 31058446 -219629408 + L1ME3A LINE L1 4661 4714 -1366 1103 275 78 6 chr2 31058461 31059178 -219628676 + L1ME3A LINE L1 4780 5560 -538 230 253 115 23 chr2 31059288 31059375 -219628479 + L1MC4a LINE L1 4741 4835 -1311 734 145 76 15 chr2 31059531 31059662 -219628192 - FRAM SINE Alu -14 162 24 453 283 158 42 chr2 31059934 31059978 -219627876 + L1MC4a LINE L1 5380 5417 -2391 2262 110 7 0 chr2 31059978 31060287 -219627567 + AluSq SINE Alu 1 311 -2 453 283 158 42 chr2 31060287 31060722 -219627132 + L1MC4a LINE L1 5417 5915 -1893 30 69 0 0 chr2 31060911 31060969 -219626885 + AT_rich Low_complexity Low_complexity 1 58 0 261 349 122 26 chr2 31060974 31061163 -219626691 + MIR SINE MIR 29 235 -27 853 176 28 50 chr2 31061510 31061692 -219626162 + FRAM SINE Alu 1 170 -6 2151 80 31 3 chr2 31061692 31061978 -219625876 + AluSc SINE Alu 1 294 -15 6598 201 30 27 chr2 31061992 31062281 -219625573 - L1 LINE L1 -2591 4257 3970 1866 113 51 3 chr2 31062281 31062573 -219625281 - AluSx SINE Alu -6 306 1 6598 201 30 27 chr2 31062573 31063385 -219624469 - L1 LINE L1 -2878 3970 3161 264 59 0 0 chr2 31063385 31063419 -219624435 + (TG)n Simple_repeat Simple_repeat 2 35 0 6598 201 30 27 chr2 31063419 31063540 -219624314 - L1 LINE L1 -3687 3161 3042 2770 13 0 0 chr2 31063540 31063841 -219624013 - AluYb8 SINE Alu -17 301 1 6598 201 30 27 chr2 31063841 31065493 -219622361 - L1 LINE L1 -3806 3042 1375 344 310 46 23 chr2 31065821 31065995 -219621859 - L1M4 LINE L1 -2632 3514 3337 651 247 70 26 chr2 31066065 31066292 -219621562 + MLT1G LTR MaLR 1 237 -353 1954 78 14 61 chr2 31066366 31066661 -219621193 + AluY SINE Alu 1 281 -30 495 0 0 0 chr2 31066665 31066720 -219621134 + (CA)n Simple_repeat Simple_repeat 2 56 0 466 237 63 139 chr2 31068679 31069109 -219618745 + L1ME3A LINE L1 5701 6097 -7 2365 83 0 3 chr2 31069656 31069956 -219617898 - AluSg SINE Alu -11 299 1 1365 231 29 0 chr2 31070096 31070377 -219617477 + AluJo SINE Alu 1 289 -13 183 191 21 64 chr2 31071187 31071234 -219616620 - L2 LINE L2 -7 3306 3262 196 339 46 0 chr2 31071240 31071305 -219616549 + L3 LINE CR1 1480 1547 -30 350 321 113 6 chr2 31071455 31071614 -219616240 + L3 LINE CR1 1391 1566 -11 444 216 144 0 chr2 31072681 31072792 -219615062 + MLT1J LTR MaLR 68 194 -317 205 186 0 0 chr2 31073081 31073124 -219614730 + A-rich Low_complexity Low_complexity 3 45 0 722 288 8 38 chr2 31073125 31073392 -219614462 - MIR SINE MIR -1 261 3 289 306 0 0 chr2 31073627 31073699 -219614155 - MIR3 SINE MIR -13 195 124 397 279 115 0 chr2 31074164 31074268 -219613586 + L2 LINE L2 3152 3267 -5 707 254 57 62 chr2 31074401 31074819 -219613035 + L1M4 LINE L1 1229 1653 -4898 1515 162 57 34 chr2 31074839 31075135 -219612719 - MER2 DNA MER2_type -4 341 39 1599 136 117 0 chr2 31075564 31075828 -219612026 + AluSx SINE Alu 1 295 -17 730 140 103 0 chr2 31076046 31076182 -219611672 - Tigger7 DNA MER2_type -24 2467 2318 1774 173 6 25 chr2 31076184 31076508 -219611346 - Tigger7 DNA MER2_type -414 319 2 1995 140 3 0 chr2 31077051 31077351 -219610503 - AluSc SINE Alu -8 301 1 255 173 0 39 chr2 31077529 31077581 -219610273 + L1MEc LINE L1 498 547 -5849 340 297 10 10 chr2 31077966 31078067 -219609787 - MIR3 SINE MIR -39 169 69 325 274 24 65 chr2 31078283 31078407 -219609447 - L2 LINE L2 -1 3271 3153 2338 201 25 98 chr2 31078568 31079141 -219608713 + L1ME1 LINE L1 5472 6086 -80 2142 100 4 0 chr2 31079141 31079421 -219608433 + AluSc SINE Alu 9 289 -20 2338 201 25 98 chr2 31079421 31079499 -219608355 + L1ME1 LINE L1 6086 6067 -99 4056 89 7 0 chr2 31079499 31080047 -219607807 - MER41A LTR ERV1 -2 552 1 2338 201 25 98 chr2 31080047 31080125 -219607729 + L1ME1 LINE L1 6066 6148 -18 25 0 0 0 chr2 31080125 31080150 -219607704 + AT_rich Low_complexity Low_complexity 1 25 0 832 339 8 0 chr2 31080231 31080470 -219607384 - MIR SINE MIR 0 262 22 4888 126 30 8 chr2 31080669 31081432 -219606422 - LTR17 LTR ERV1 0 780 1 2461 48 0 0 chr2 31081432 31081724 -219606130 - HERV17 LTR ERV1 0 8626 8335 596 53 0 0 chr2 31081714 31081790 -219606064 - HERV17 LTR ERV1 -1078 7548 7473 * 5142 49 18 0 chr2 31081773 31082401 -219605453 - HERV17 LTR ERV1 -4048 4578 3940 * 5499 98 27 10 chr2 31082383 31083243 -219604611 - Harlequin LTR ERV1 -5237 1659 737 4964 93 13 21 chr2 31083511 31084209 -219603645 - Harlequin LTR ERV1 -7919 707 16 5023 120 37 5 chr2 31084224 31084980 -219602874 - LTR17 LTR ERV1 0 780 1 1966 125 3 24 chr2 31086878 31087229 -219600625 - MER4A LTR ERV1 0 664 263 593 140 20 10 chr2 31087228 31087328 -219600526 - MER4A LTR ERV1 -563 101 1 * 259 205 0 26 chr2 31087597 31087675 -219600179 + (TA)n Simple_repeat Simple_repeat 1 76 0 407 372 64 6 chr2 31087762 31088259 -219599595 + L1MC4a LINE L1 5398 5923 -1885 1455 275 58 41 chr2 31088861 31089345 -219598509 + HAL1 LINE L1 143 639 -1868 1072 164 56 5 chr2 31089345 31089540 -219598314 + MER3 DNA MER1_type 5 209 0 1455 275 58 41 chr2 31089540 31089611 -219598243 + HAL1 LINE L1 639 707 -1800 628 95 0 0 chr2 31089615 31089699 -219598155 + AluS SINE Alu 1 84 -228 2393 255 74 39 chr2 31089707 31090852 -219597002 + HAL1 LINE L1 707 1891 -616 1877 143 31 0 chr2 31091070 31091356 -219596498 + AluSx SINE Alu 5 299 -13 7099 163 57 5 chr2 31091443 31093611 -219594243 + L1PA13 LINE L1 3931 6161 -2 23 33 0 0 chr2 31094563 31094593 -219593261 + AT_rich Low_complexity Low_complexity 1 30 0 803 245 51 39 chr2 31095124 31095381 -219592473 + L1ME3A LINE L1 5890 6149 -21 666 263 89 42 chr2 31095438 31095963 -219591891 + L1MC4a LINE L1 5328 5437 -860 22 0 0 0 chr2 31096597 31096619 -219591235 + AT_rich Low_complexity Low_complexity 1 22 0 182 114 105 29 chr2 31096719 31096824 -219591030 + (TATATG)n Simple_repeat Simple_repeat 2 114 0 264 100 0 0 chr2 31096824 31096864 -219590990 + (CA)n Simple_repeat Simple_repeat 2 41 0 715 118 0 17 chr2 31097493 31097612 -219590242 + L1MB8 LINE L1 5588 5704 -480 1694 172 103 48 chr2 31097681 31098124 -219589730 + MER66A LTR ERV1 97 478 0 1964 180 49 24 chr2 31098124 31098575 -219589279 + L1MB8 LINE L1 5701 6162 -16 318 252 129 14 chr2 31098779 31098918 -219588936 + L1ME4a LINE L1 5966 6120 -1 1298 146 0 33 chr2 31099257 31099470 -219588384 - AluSg/x SINE Alu -16 294 89 2889 128 16 26 chr2 31099632 31099824 -219588030 - LOR1a LTR ERV1 0 497 305 405 0 0 0 chr2 31099824 31099869 -219587985 + (CA)n Simple_repeat Simple_repeat 2 46 0 2889 128 16 26 chr2 31099869 31100178 -219587676 - LOR1a LTR ERV1 -192 305 1 211 271 0 0 chr2 31101331 31101379 -219586475 - L3 LINE CR1 -6 1571 1524 2202 101 0 7 chr2 31101464 31101772 -219586082 + AluSq SINE Alu 1 306 -7 257 241 120 0 chr2 31102178 31102286 -219585568 - MIR SINE MIR -50 212 92 405 165 0 92 chr2 31102311 31102420 -219585434 + MER61E LTR ERV1 1 99 -470 308 148 148 0 chr2 31102551 31102612 -219585242 + MER51A LTR ERV1 211 280 -354 * 1386 170 111 18 chr2 31102583 31102924 -219584930 + LTR25 LTR ERV1 415 787 -7 185 271 262 16 chr2 31104318 31104440 -219583414 - MIR SINE MIR -50 212 61 2342 110 128 11 chr2 31104651 31105033 -219582821 + MSTA LTR MaLR 2 428 0 277 270 16 0 chr2 31105310 31105373 -219582481 + MER20B DNA MER1_type 3 66 -717 452 209 60 55 chr2 31105420 31105602 -219582252 + MER20B DNA MER1_type 592 774 -9 287 164 18 18 chr2 31105609 31105664 -219582190 + MIR3 SINE MIR 151 205 -3 23 0 0 0 chr2 31105969 31105992 -219581862 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr2 31106096 31106134 -219581720 + AT_rich Low_complexity Low_complexity 1 38 0 185 156 0 44 chr2 31106304 31106349 -219581505 + (CATA)n Simple_repeat Simple_repeat 1 43 0 270 231 0 0 chr2 31106351 31106403 -219581451 + MER4-int LTR ERV1 1111 1162 -5436 1073 158 28 6 chr2 31106706 31106883 -219580971 - AluJo SINE Alu -12 300 120 190 118 59 0 chr2 31106894 31106945 -219580909 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 642 175 8 25 chr2 31106955 31107075 -219580779 - AluJo SINE Alu -184 118 1 488 231 177 14 chr2 31107224 31107371 -219580483 + L1MD2 LINE L1 5952 6122 -237 246 297 108 51 chr2 31107790 31107985 -219579869 - MIR SINE MIR -9 253 48 186 43 0 0 chr2 31108350 31108373 -219579481 + (T)n Simple_repeat Simple_repeat 1 23 0 201 318 143 19 chr2 31108392 31108653 -219579201 + L2 LINE L2 2763 3055 -217 648 212 171 45 chr2 31109425 31109647 -219578207 + MIR SINE MIR 2 251 -11 1158 189 117 14 chr2 31109846 31110137 -219577717 - MER33 DNA MER1_type -1 323 3 202 154 154 0 chr2 31110325 31110364 -219577490 - MIR SINE MIR -66 142 98 2156 89 48 10 chr2 31110455 31110747 -219577107 + AluY SINE Alu 1 303 -8 725 256 98 28 chr2 31110774 31110989 -219576865 + MIR SINE MIR 33 262 0 2493 62 3 0 chr2 31111296 31111600 -219576254 + AluY SINE Alu 1 305 -6 687 133 44 7 chr2 31112874 31113009 -219574845 - L1MB8 LINE L1 -1 6177 6038 291 250 91 23 chr2 31113389 31113477 -219574377 + L2 LINE L2 3197 3290 -23 439 253 180 35 chr2 31113994 31114287 -219573567 - MLT1J2 LTR MaLR -21 429 105 26 64 0 0 chr2 31114657 31114704 -219573150 + AT_rich Low_complexity Low_complexity 1 47 0 390 57 0 0 chr2 31115993 31116046 -219571808 + (CATAC)n Simple_repeat Simple_repeat 2 54 0 946 269 24 30 chr2 31116536 31116870 -219570984 - MARNA DNA Mariner -55 531 200 486 354 6 6 chr2 31116960 31117118 -219570736 - MIR3 SINE MIR -48 160 3 560 275 56 11 chr2 31117348 31117526 -219570328 - MIR SINE MIR -10 252 67 1612 147 34 31 chr2 31117570 31117606 -219570248 - L1MC3 LINE L1 -8 7777 7743 837 149 0 8 chr2 31117606 31117740 -219570114 - FLAM_C SINE Alu 0 133 1 1612 147 34 31 chr2 31117740 31118029 -219569825 - L1MC3 LINE L1 -42 7743 7451 186 297 0 31 chr2 31118039 31118103 -219569751 - MIR SINE MIR -194 68 7 562 158 0 53 chr2 31118149 31118263 -219569591 - FLAM_C SINE Alu -6 137 30 852 293 87 25 chr2 31119177 31119659 -219568195 + L2 LINE L2 1793 2304 -1010 267 302 102 66 chr2 31119666 31120147 -219567707 + L2 LINE L2 2691 3253 -60 583 273 0 7 chr2 31120201 31120340 -219567514 - FRAM SINE Alu -38 138 1 1611 157 75 14 chr2 31120452 31120732 -219567122 + AluJb SINE Alu 1 297 -15 392 294 46 0 chr2 31120990 31121099 -219566755 - MIR SINE MIR -65 143 30 1193 229 86 51 chr2 31121183 31121400 -219566454 - L1ME3 LINE L1 -27 6135 5927 1593 178 0 57 chr2 31121400 31121731 -219566123 + AluJo SINE Alu 1 312 0 1193 229 86 51 chr2 31121731 31121945 -219565909 - L1ME3 LINE L1 -235 5927 5689 279 79 0 0 chr2 31122229 31122267 -219565587 + (CCTA)n Simple_repeat Simple_repeat 1 38 0 813 176 81 0 chr2 31122281 31122417 -219565437 - FRAM SINE Alu -32 144 1 22 0 0 0 chr2 31122857 31122879 -219564975 + AT_rich Low_complexity Low_complexity 1 22 0 2719 164 15 19 chr2 31124132 31124595 -219563259 - MER1A DNA MER1_type 0 529 69 610 275 67 10 chr2 31124619 31124812 -219563042 + MIR SINE MIR 59 262 0 275 349 135 21 chr2 31124957 31125149 -219562705 - L3 LINE CR1 -11 1566 1353 1601 170 19 15 chr2 31125660 31125930 -219561924 + AluJo SINE Alu 13 283 -29 1911 165 0 10 chr2 31125995 31126298 -219561556 + AluJo SINE Alu 1 300 -12 603 146 82 27 chr2 31126411 31126521 -219561333 + FLAM_A SINE Alu 11 126 -16 619 216 158 52 chr2 31126559 31126925 -219560929 + LTR37A LTR ERV1 1 405 -21 212 267 23 30 chr2 31127665 31127796 -219560058 + (TA)n Simple_repeat Simple_repeat 1 130 0 2579 204 60 49 chr2 31128909 31129438 -219558416 + L1MB5 LINE L1 3999 4521 -1625 2218 118 0 0 chr2 31129438 31129734 -219558120 + AluSx SINE Alu 1 296 -16 2325 88 0 3 chr2 31129736 31130070 -219557784 + AluSg1 SINE Alu 1 333 0 2579 204 60 49 chr2 31130070 31130304 -219557550 + L1MB5 LINE L1 4521 4775 -1371 1041 177 61 139 chr2 31130305 31130615 -219557239 + LTR8 LTR ERV1 1 266 -425 592 209 45 115 chr2 31130662 31130906 -219556948 + LTR8A LTR ERV1 287 513 -214 992 124 0 7 chr2 31130918 31131055 -219556799 + AluSq/x SINE Alu 2 137 -176 1821 97 56 103 chr2 31131055 31131376 -219556478 + AluY SINE Alu 1 306 -5 2082 195 49 0 chr2 31131394 31132097 -219555757 + L1MB5 LINE L1 4812 5557 -617 1732 137 59 0 chr2 31132116 31132422 -219555432 + L1MB5 LINE L1 5851 6174 0 7974 32 3 3 chr2 31132522 31134008 -219553846 + L1PA5 LINE L1 4675 6154 0 21 36 0 0 chr2 31134118 31134146 -219553708 + AT_rich Low_complexity Low_complexity 1 28 0 275 278 132 62 chr2 31134151 31134295 -219553559 - MER5A DNA MER1_type -2 187 34 * 359 238 164 16 chr2 31134194 31134316 -219553538 + MER5A DNA MER1_type 50 189 0 761 214 15 0 chr2 31134552 31134683 -219553171 + FLAM_C SINE Alu 1 133 0 226 26 79 0 chr2 31134686 31134724 -219553130 + A-rich Low_complexity Low_complexity 5 45 0 1264 229 130 50 chr2 31135444 31135907 -219551947 - MLT1D LTR MaLR -5 500 1 703 169 81 37 chr2 31135937 31136073 -219551781 + FLAM_C SINE Alu 2 143 0 635 292 83 41 chr2 31136810 31137141 -219550713 + L1ME4a LINE L1 5479 5776 -345 1810 169 78 3 chr2 31137141 31137460 -219550394 + MER2 DNA MER2_type 1 343 -1 635 292 83 41 chr2 31137460 31137588 -219550266 + L1ME4a LINE L1 5776 5897 -224 431 143 83 0 chr2 31137607 31137691 -219550163 + L1ME4a LINE L1 5814 5904 -217 31 44 0 0 chr2 31137776 31137821 -219550033 + AT_rich Low_complexity Low_complexity 1 45 0 664 152 0 29 chr2 31137835 31137940 -219549914 - FLAM_A SINE Alu -15 127 26 263 298 33 16 chr2 31138204 31138325 -219549529 + MARNA DNA Mariner 273 395 -191 2747 10 0 7 chr2 31138874 31139182 -219548672 + AluY SINE Alu 1 306 -5 224 254 254 9 chr2 31139272 31139382 -219548472 + MIR SINE MIR 16 152 -110 792 188 0 0 chr2 31139394 31139527 -219548327 + FLAM_A SINE Alu 1 133 0 211 297 0 0 chr2 31139596 31139660 -219548194 + MIR SINE MIR 177 240 -22 1480 213 125 103 chr2 31139673 31140411 -219547443 - MER21B LTR ERV1 -109 754 1 180 321 104 8 chr2 31140638 31140772 -219547082 - L2 LINE L2 -954 2360 2214 257 352 71 31 chr2 31142983 31143179 -219544675 - MIR SINE MIR -20 242 39 1090 221 70 45 chr2 31143188 31143587 -219544267 - LTR37A LTR ERV1 0 426 18 22 0 0 0 chr2 31143789 31143811 -219544043 + AT_rich Low_complexity Low_complexity 1 22 0 2569 196 131 38 chr2 31144054 31144773 -219543081 + L1MDa LINE L1 19 804 -5736 622 245 88 5 chr2 31144802 31145018 -219542836 + L1M4 LINE L1 3393 3626 -2520 1832 148 6 38 chr2 31145020 31145338 -219542516 - AluJo SINE Alu -4 308 1 958 221 62 92 chr2 31145370 31145642 -219542212 + MLT1D LTR MaLR 204 505 0 1740 164 16 19 chr2 31146207 31146517 -219541337 + AluJo SINE Alu 1 309 -3 706 230 169 33 chr2 31146929 31147142 -219540712 + MIR SINE MIR 2 243 -19 194 301 108 24 chr2 31147280 31147363 -219540491 + L2 LINE L2 3136 3225 -47 1363 207 91 40 chr2 31148712 31149142 -219538712 - L1ME3 LINE L1 0 6162 5711 340 194 30 0 chr2 31149118 31149185 -219538669 - L1ME LINE L1 -361 5809 5741 * 340 194 30 0 chr2 31149187 31149254 -219538600 - L1ME LINE L1 -361 5809 5741 340 194 30 0 chr2 31149256 31149323 -219538531 - L1ME LINE L1 -361 5809 5741 342 194 30 0 chr2 31149325 31149392 -219538462 - L1ME LINE L1 -361 5809 5741 * 1516 235 45 88 chr2 31149391 31150166 -219537688 - L1ME LINE L1 -352 5810 5071 2329 93 3 0 chr2 31151153 31151455 -219536399 + AluSp SINE Alu 1 303 -10 23 33 0 0 chr2 31151673 31151703 -219536151 + AT_rich Low_complexity Low_complexity 1 30 0 547 248 47 13 chr2 31151809 31151958 -219535896 + MIR SINE MIR 75 228 -34 192 335 73 24 chr2 31152009 31152173 -219535681 - MIR SINE MIR -42 220 49 2831 10 0 3 chr2 31153843 31154155 -219533699 - AluYa5 SINE Alu 0 311 1 202 339 0 0 chr2 31154386 31154445 -219533409 - MIR SINE MIR -110 98 40 2104 136 7 0 chr2 31155369 31155677 -219532177 - AluJb SINE Alu -2 310 1 538 365 27 14 chr2 31155679 31155898 -219531956 - HERV16 LTR ERVL -1906 3090 2869 650 226 36 20 chr2 31155909 31156100 -219531754 + L1MD3 LINE L1 7593 7968 -2 328 286 52 0 chr2 31156102 31156179 -219531675 - HERV16 LTR ERVL -2135 2861 2781 1097 102 0 32 chr2 31156183 31156340 -219531514 - Charlie3 DNA MER1_type -5 2705 2554 955 275 75 36 chr2 31157072 31157129 -219530725 + LTR33 LTR ERVL 2 55 -466 2001 130 3 3 chr2 31157129 31157430 -219530424 - AluSp SINE Alu -12 301 1 955 275 75 36 chr2 31157430 31157867 -219529987 + LTR33 LTR ERVL 55 515 -6 346 279 61 28 chr2 31158024 31158212 -219529642 - MLT1L LTR MaLR 0 573 334 338 150 98 94 chr2 31158202 31158333 -219529521 - AluJo/FRAM SINE Alu -43 259 181 * 676 202 48 16 chr2 31158333 31158457 -219529397 - FLAM_A SINE Alu -14 128 1 484 226 120 23 chr2 31158459 31158592 -219529262 - MLT1L LTR MaLR -156 459 314 1933 171 0 0 chr2 31158597 31158902 -219528952 + AluSx SINE Alu 1 305 -7 2392 86 7 0 chr2 31159058 31159362 -219528492 - AluSp SINE Alu -7 306 1 1525 183 147 3 chr2 31159366 31159700 -219528154 + MER74A LTR ERVL 14 395 -163 710 152 65 43 chr2 31159702 31159732 -219528122 - FLAM_C SINE Alu -170 142 114 1514 94 10 0 chr2 31159732 31159934 -219527920 + AluSp SINE Alu 100 303 -10 710 152 65 43 chr2 31159934 31160041 -219527813 - FLAM_C SINE Alu -198 114 2 673 226 63 0 chr2 31160044 31160203 -219527651 + MER74A LTR ERVL 390 558 0 189 250 111 0 chr2 31160497 31160569 -219527285 - MIR SINE MIR -65 197 118 2516 193 36 22 chr2 31160574 31161072 -219526782 - MLT1D LTR MaLR 0 505 1 1670 176 109 40 chr2 31161073 31161449 -219526405 - MLT1D LTR MaLR -103 402 1 629 382 9 73 chr2 31161449 31161615 -219526239 + L1MA10 LINE L1 5948 6123 -208 2568 93 5 86 chr2 31161615 31161967 -219525887 + THE1C LTR MaLR 1 380 5 2324 68 0 4 chr2 31161967 31162248 -219525606 + AluY SINE Alu 1 280 -31 180 0 0 0 chr2 31162251 31162271 -219525583 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2568 93 5 86 chr2 31162271 31162322 -219525532 + THE1C LTR MaLR 321 375 0 629 382 9 73 chr2 31162322 31162377 -219525477 + L1MA10 LINE L1 6123 6326 -5 22 0 0 0 chr2 31163453 31163475 -219524379 + AT_rich Low_complexity Low_complexity 1 22 0 498 260 71 41 chr2 31163623 31163792 -219524062 + MIR SINE MIR 41 214 -48 209 232 134 49 chr2 31164048 31164130 -219523724 + MIR3 SINE MIR 97 185 -23 571 239 142 13 chr2 31164489 31164644 -219523210 - MER5B DNA MER1_type -3 175 1 275 288 186 17 chr2 31164779 31164956 -219522898 + MIR SINE MIR 6 212 -50 1427 181 168 3 chr2 31165161 31165453 -219522401 + MLT1A1 LTR MaLR 1 340 -25 2179 112 3 19 chr2 31165456 31165770 -219522084 - AluSx SINE Alu -1 311 3 1633 174 11 3 chr2 31165781 31166068 -219521786 - AluJb SINE Alu -23 289 1 229 238 0 0 chr2 31166070 31166112 -219521742 + MLT1A1 LTR MaLR 333 374 0 184 253 114 0 chr2 31166200 31166279 -219521575 + L2 LINE L2 3185 3272 0 439 225 125 42 chr2 31166571 31166811 -219521043 - L1ME4a LINE L1 0 6121 5862 503 208 44 153 chr2 31167838 31168112 -219519742 - HAL1 LINE L1 -14 2493 2250 371 154 0 0 chr2 31168123 31168188 -219519666 - L1MA10 LINE L1 -6 6328 6264 909 142 7 7 chr2 31168188 31168329 -219519525 + AluJo SINE Alu 2 142 -170 581 41 31 20 chr2 31168346 31168444 -219519410 + (GAAA)n Simple_repeat Simple_repeat 4 102 0 2797 183 58 106 chr2 31168453 31168868 -219518986 + L1ME1 LINE L1 5352 5749 -417 230 53 132 0 chr2 31168868 31168906 -219518948 - MADE1 DNA Mariner -37 43 1 2797 183 58 106 chr2 31168906 31169261 -219518593 + L1ME1 LINE L1 5749 6120 -46 1795 161 3 30 chr2 31169275 31169580 -219518274 - AluJo SINE Alu -15 297 1 29 60 0 0 chr2 31169605 31169655 -219518199 + AT_rich Low_complexity Low_complexity 1 50 0 634 285 28 11 chr2 31169699 31169924 -219517930 + L1MC4 LINE L1 7403 7700 -295 553 247 25 12 chr2 31170087 31170245 -219517609 - MER21B LTR ERV1 -388 543 329 3027 203 48 25 chr2 31170245 31170278 -219517576 - L1M4 LINE L1 -805 5341 5310 2585 61 0 0 chr2 31170278 31170589 -219517265 - AluY SINE Alu 0 311 1 3027 203 48 25 chr2 31170589 31171344 -219516510 - L1M4 LINE L1 -836 5310 4535 986 118 0 22 chr2 31171367 31171503 -219516351 + FLAM_C SINE Alu 1 133 0 516 323 91 0 chr2 31171576 31171762 -219516092 - MIR SINE MIR -3 259 57 189 0 0 0 chr2 31171938 31171959 -219515895 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 261 139 0 0 chr2 31172054 31172097 -219515757 + (T)n Simple_repeat Simple_repeat 1 43 0 1691 170 24 14 chr2 31174170 31174464 -219513390 + AluJb SINE Alu 1 297 -15 237 180 0 0 chr2 31174625 31174675 -219513179 + (CAT)n Simple_repeat Simple_repeat 2 51 0 422 304 101 16 chr2 31174711 31174914 -219512940 - MIR SINE MIR -48 214 4 183 86 0 86 chr2 31174974 31175009 -219512845 + L2 LINE L2 3270 3301 -12 375 134 0 45 chr2 31175110 31175177 -219512677 - Alu SINE Alu -7 293 230 2638 65 0 0 chr2 31175181 31175490 -219512364 - AluSc SINE Alu 0 309 1 414 0 0 0 chr2 31176171 31176217 -219511637 + (TG)n Simple_repeat Simple_repeat 1 46 0 232 224 0 0 chr2 31176736 31176785 -219511069 + L2 LINE L2 3224 3272 0 294 303 15 30 chr2 31176926 31177058 -219510796 - L2 LINE L2 0 3313 3184 2205 96 3 7 chr2 31177064 31177367 -219510487 + AluY SINE Alu 1 302 -9 2446 208 59 6 chr2 31177380 31177889 -219509965 - MER45B DNA AcHobo -3 1037 502 660 170 88 82 chr2 31177896 31178001 -219509853 + MER45B DNA AcHobo 348 456 -584 2068 139 0 3 chr2 31178001 31178302 -219509552 - AluSx SINE Alu -12 300 1 660 170 88 82 chr2 31178302 31178343 -219509511 + MER45B DNA AcHobo 456 495 -545 241 275 244 38 chr2 31179887 31180018 -219507836 + MIR SINE MIR 27 184 -78 431 308 75 45 chr2 31180822 31181410 -219506444 + L1ME4a LINE L1 5269 5883 -238 1693 165 3 52 chr2 31181410 31181738 -219506116 + AluJo SINE Alu 1 312 0 431 308 75 45 chr2 31181738 31181811 -219506043 + L1ME4a LINE L1 5883 5952 -169 31 0 0 0 chr2 31181811 31181842 -219506012 + AT_rich Low_complexity Low_complexity 1 31 0 291 209 0 0 chr2 31181942 31182057 -219505797 + G-rich Low_complexity Low_complexity 1 115 0 363 195 0 0 chr2 31182078 31182201 -219505653 + G-rich Low_complexity Low_complexity 1 123 0 36 0 0 0 chr2 31182414 31182450 -219505404 + AT_rich Low_complexity Low_complexity 1 36 0 5301 152 36 29 chr2 31182606 31183222 -219504632 - L1MA8 LINE L1 -4 6287 5660 2346 94 3 3 chr2 31183222 31183529 -219504325 - AluSx SINE Alu -5 307 1 5301 152 36 29 chr2 31183529 31183879 -219503975 - L1MA8 LINE L1 -631 5660 5314 769 172 0 39 chr2 31183893 31184021 -219503833 - FLAM_C SINE Alu -18 125 3 343 128 0 116 chr2 31184021 31184107 -219503747 - L1MA8 LINE L1 -979 5333 5258 208 272 49 0 chr2 31184910 31184991 -219502863 + (GGATG)n Simple_repeat Simple_repeat 2 86 0 783 231 7 0 chr2 31185148 31185338 -219502516 - FRAM SINE Alu 0 189 1 1195 184 90 20 chr2 31185380 31185516 -219502338 - AluJo SINE Alu -39 273 148 194 0 39 0 chr2 31185516 31185542 -219502312 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1195 184 90 20 chr2 31185542 31185660 -219502194 - AluJo SINE Alu -164 148 1 4797 175 17 52 chr2 31185867 31187246 -219500608 + L1MB7 LINE L1 4850 6184 0 295 299 15 15 chr2 31187545 31187679 -219500175 - L2 LINE L2 -214 3058 2925 1938 114 50 0 chr2 31187925 31188205 -219499649 - AluSx SINE Alu -16 296 3 2551 56 0 7 chr2 31190244 31190548 -219497306 - AluY SINE Alu -8 303 2 327 78 0 0 chr2 31191735 31191786 -219496068 + (CA)n Simple_repeat Simple_repeat 2 52 0 427 269 86 16 chr2 31191809 31191991 -219495863 + MIR SINE MIR 3 192 -63 378 0 0 0 chr2 31193564 31193606 -219494248 + (CA)n Simple_repeat Simple_repeat 2 43 0 844 169 0 0 chr2 31194561 31194718 -219493136 - FLAM_C SINE Alu 0 158 2 379 294 55 18 chr2 31197448 31197611 -219490243 - MIR3 SINE MIR -7 201 33 237 65 0 0 chr2 31198118 31198149 -219489705 + (CA)n Simple_repeat Simple_repeat 1 31 0 226 328 24 24 chr2 31198347 31198472 -219489382 + MIR SINE MIR 14 138 -124 362 244 26 58 chr2 31199385 31199541 -219488313 - L3 LINE CR1 -297 1280 1130 439 279 194 37 chr2 31200051 31200345 -219487509 - MLT1K LTR MaLR 0 588 249 22 0 0 0 chr2 31202159 31202181 -219485673 + AT_rich Low_complexity Low_complexity 1 22 0 763 195 84 0 chr2 31202295 31202449 -219485405 - L1PB4 LINE L1 -22 6134 5968 304 81 44 66 chr2 31202664 31202800 -219485054 + (TTATA)n Simple_repeat Simple_repeat 1 133 0 270 263 12 0 chr2 31202805 31202885 -219484969 - L1MB8 LINE L1 -15 6163 6083 189 0 0 0 chr2 31202946 31202967 -219484887 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 344 232 155 48 chr2 31203110 31203278 -219484576 - MIR SINE MIR -51 211 26 699 261 109 12 chr2 31203860 31204069 -219483785 + L1ME LINE L1 5464 5725 -396 1576 152 10 84 chr2 31204069 31204379 -219483475 - AluJo SINE Alu -25 287 1 699 261 109 12 chr2 31204379 31204484 -219483370 + L1ME LINE L1 5725 5818 -303 393 281 104 10 chr2 31204560 31204752 -219483102 - MIR SINE MIR -1 261 52 181 264 19 19 chr2 31204784 31204837 -219483017 + L3 LINE CR1 464 516 -1061 375 202 121 110 chr2 31205320 31205433 -219482421 + MER69A DNA AcHobo 1 118 -2408 1882 150 41 0 chr2 31205433 31205726 -219482128 + AluJb SINE Alu 1 305 -7 375 202 121 110 chr2 31205726 31205785 -219482069 + MER69A DNA AcHobo 118 175 -2 2470 84 3 0 chr2 31206524 31206833 -219481021 + AluSq SINE Alu 1 310 -3 324 273 25 16 chr2 31207028 31207149 -219480705 + GA-rich Low_complexity Low_complexity 2 123 0 1888 132 25 4 chr2 31208257 31208555 -219479299 - AluSx SINE Alu 0 304 1 1992 134 0 21 chr2 31208572 31208863 -219478991 - AluSx SINE Alu -27 285 1 411 289 62 16 chr2 31208878 31209072 -219478782 + MIR SINE MIR 54 256 -6 192 256 39 51 chr2 31209220 31209298 -219478556 + MIR SINE MIR 130 206 -56 626 126 50 8 chr2 31209437 31209556 -219478298 - L1MB2 LINE L1 -15 6156 6033 305 219 57 67 chr2 31210258 31210363 -219477491 + MIR SINE MIR 81 184 -78 2195 114 0 3 chr2 31210889 31211187 -219476667 - AluSq SINE Alu -16 297 1 420 289 68 78 chr2 31211202 31211613 -219476241 + MLT1J LTR MaLR 105 511 0 21 0 0 0 chr2 31211622 31211643 -219476211 + AT_rich Low_complexity Low_complexity 1 21 0 395 260 10 10 chr2 31213561 31213665 -219474189 - MIR SINE MIR -109 153 50 182 213 0 21 chr2 31213851 31213898 -219473956 + MIR SINE MIR 118 163 -99 380 293 156 6 chr2 31214460 31214627 -219473227 - MIR SINE MIR -50 212 21 9175 78 1 1 chr2 31214869 31216040 -219471814 + L1P LINE L1 101 1271 -4875 34135 38 4 0 chr2 31216140 31220496 -219467358 - L1P2 LINE L1 -530 5625 1258 555 312 30 5 chr2 31221726 31221925 -219465929 - MIR SINE MIR 0 262 59 235 219 31 16 chr2 31222261 31222325 -219465529 - L2 LINE L2 -8 3305 3241 406 236 203 7 chr2 31222459 31222607 -219465247 + MIR SINE MIR 10 186 -76 515 71 0 14 chr2 31222712 31222818 -219465036 + L1PA4 LINE L1 6063 6167 0 485 262 48 14 chr2 31223883 31224028 -219463826 - MER5A DNA MER1_type -1 188 39 354 283 113 31 chr2 31224279 31224319 -219463535 + MER5B DNA MER1_type 7 42 -136 192 40 0 0 chr2 31224319 31224344 -219463510 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1699 25 10 0 chr2 31224345 31224545 -219463309 - L1PA4 LINE L1 -14 6141 5940 354 283 113 31 chr2 31224545 31224661 -219463193 + MER5B DNA MER1_type 41 178 0 1077 229 51 42 chr2 31224959 31225295 -219462559 - LTR16A LTR ERVL -6 444 106 221 346 10 0 chr2 31225549 31225650 -219462204 + MIR SINE MIR 51 152 -110 400 247 155 32 chr2 31226142 31226361 -219461493 + L1ME4a LINE L1 5848 6093 -28 2313 85 3 7 chr2 31227104 31227398 -219460456 - AluSg SINE Alu -17 293 1 1464 191 140 51 chr2 31227521 31227950 -219459904 + MLT1C LTR MaLR 1 467 0 2350 95 3 0 chr2 31228272 31228578 -219459276 + AluSc SINE Alu 1 307 -2 601 140 0 30 chr2 31229340 31229478 -219458376 + L1M LINE L1 5274 5402 -778 2373 129 63 3 chr2 31229478 31229858 -219457996 + MER57A LTR ERV1 1 403 0 3382 118 67 28 chr2 31229858 31230398 -219457456 + MER57A-int LTR ERV1 1 561 -6976 416 274 109 71 chr2 31230498 31230764 -219457090 - L3 LINE CR1 -694 883 608 332 236 22 22 chr2 31230998 31231087 -219456767 - L1MC4 LINE L1 -1339 6703 6615 321 311 0 0 chr2 31231012 31231102 -219456752 + L1MC4 LINE L1 6614 6703 -1339 * 1405 267 39 5 chr2 31231491 31232103 -219455751 + L1ME LINE L1 5167 5801 -361 596 197 84 0 chr2 31232186 31232209 -219455645 - L1MA10 LINE L1 -1 6333 6311 6285 222 85 23 chr2 31232209 31235193 -219452661 - L1ME1 LINE L1 -23 6143 2815 267 272 228 0 chr2 31235383 31235497 -219452357 - MIR SINE MIR 0 262 123 291 228 18 0 chr2 31235829 31235886 -219451968 - L2 LINE L2 -7 3306 3249 610 148 99 68 chr2 31236167 31236329 -219451525 + MLT1B LTR MaLR 7 173 -217 573 145 92 72 chr2 31236321 31236427 -219451427 + MLT1B LTR MaLR 301 412 -55 * 998 31 78 8 chr2 31236427 31236555 -219451299 - MER85 DNA T2_type 0 139 3 573 145 92 72 chr2 31236555 31236600 -219451254 + MLT1B LTR MaLR 412 455 -12 493 314 0 19 chr2 31237467 31237623 -219450231 - MIR SINE MIR -2 260 108 489 125 12 12 chr2 31238242 31238322 -219449532 + MER116 DNA Mariner 1 80 0 317 344 121 9 chr2 31238889 31239113 -219448741 - MIR SINE MIR -8 254 6 205 228 238 10 chr2 31240264 31240365 -219447489 + MIR SINE MIR 23 146 -116 243 206 16 32 chr2 31240968 31241031 -219446823 - MIR SINE MIR -1 261 200 211 306 85 0 chr2 31242008 31242099 -219445755 - MIR SINE MIR -60 148 53 755 289 74 8 chr2 31242415 31242657 -219445197 - MIR SINE MIR 0 262 5 340 289 88 18 chr2 31242818 31242932 -219444922 + MIR SINE MIR 141 262 0 2224 107 3 0 chr2 31243130 31243430 -219444424 - AluSx SINE Alu -11 301 1 206 214 57 29 chr2 31243761 31243831 -219444023 + CT-rich Low_complexity Low_complexity 4 75 0 400 325 8 0 chr2 31244161 31244278 -219443576 - MIR SINE MIR -14 248 131 1240 150 14 10 chr2 31244278 31244485 -219443369 + MER3 DNA MER1_type 1 208 -1 273 89 44 0 chr2 31245371 31245416 -219442438 - MLT2B1 LTR ERVL 0 520 474 1165 209 27 51 chr2 31245508 31245964 -219441890 - MLT2B1 LTR ERVL -32 488 1 232 271 176 12 chr2 31246070 31246155 -219441699 + MIR SINE MIR 17 115 -147 208 317 84 56 chr2 31246159 31246301 -219441553 + MER5B DNA MER1_type 4 149 -29 229 248 60 53 chr2 31246796 31246929 -219440925 - L1 LINE L1 -2196 3950 3817 410 289 112 67 chr2 31247106 31247480 -219440374 - L1 LINE L1 -2465 3681 3291 499 27 0 95 chr2 31247535 31247609 -219440245 - MADE1 DNA Mariner 0 80 14 254 259 37 0 chr2 31247856 31247910 -219439944 - MIR SINE MIR -7 255 200 355 245 27 58 chr2 31248039 31248194 -219439660 - MIR SINE MIR -65 143 40 377 272 53 18 chr2 31250108 31250222 -219437632 - MIR3 SINE MIR -53 155 38 1704 100 77 4 chr2 31250927 31251187 -219436667 + AluSx SINE Alu 1 279 -33 962 304 59 23 chr2 31251792 31252483 -219435371 - L1M4 LINE L1 -1353 4793 4078 1618 306 116 62 chr2 31252529 31253991 -219433863 - L1M4 LINE L1 -2385 3761 2221 428 302 103 53 chr2 31254098 31254317 -219433537 - HAL1 LINE L1 -860 1647 1440 2156 88 3 26 chr2 31254317 31254622 -219433232 + AluSc SINE Alu 1 298 -11 428 302 103 53 chr2 31254622 31254819 -219433035 - HAL1 LINE L1 -1067 1440 1210 258 139 0 0 chr2 31254824 31254860 -219432994 - MER5A DNA MER1_type -139 50 15 269 250 119 12 chr2 31255452 31255536 -219432318 - L2 LINE L2 -31 3282 3190 470 241 44 29 chr2 31255560 31255697 -219432157 - MIR SINE MIR -70 192 54 227 311 0 29 chr2 31256464 31256567 -219431287 + L2 LINE L2 2922 3021 -251 214 320 113 0 chr2 31256684 31256781 -219431073 - MIR SINE MIR -83 125 18 252 267 35 76 chr2 31257384 31257556 -219430298 - L2 LINE L2 -144 3128 2964 353 194 0 16 chr2 31257797 31257859 -219429995 - L2 LINE L2 -5 3308 3248 288 77 0 0 chr2 31258513 31258552 -219429302 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 184 247 117 52 chr2 31259360 31259437 -219428417 - L2 LINE L2 -40 3232 3151 516 236 24 16 chr2 31259961 31260084 -219427770 - MIR3 SINE MIR 0 208 85 217 241 57 82 chr2 31261560 31261718 -219426136 - MIR3 SINE MIR -15 193 40 230 224 57 85 chr2 31262568 31262676 -219425178 - MIR SINE MIR -105 103 8 244 316 58 36 chr2 31263212 31263351 -219424503 - MIR SINE MIR -52 210 69 718 252 89 65 chr2 31264490 31264896 -219422958 - MLT1J LTR MaLR -2 444 19 229 322 83 33 chr2 31264976 31265097 -219422757 - MIR SINE MIR -56 152 26 308 273 23 11 chr2 31265527 31265615 -219422239 + MER117 DNA MER1_type 109 197 0 322 225 45 11 chr2 31266063 31266152 -219421702 - MER103 DNA DNA -11 155 64 1537 67 5 19 chr2 31266919 31267129 -219420725 + AluY SINE Alu 83 289 -22 294 248 73 37 chr2 31267461 31267570 -219420284 + MIR SINE MIR 19 131 -131 734 194 9 4 chr2 31267957 31268193 -219419661 + GA-rich Low_complexity Low_complexity 1 237 0 333 130 0 0 chr2 31268362 31268408 -219419446 - Alu SINE Alu -257 46 1 456 208 94 44 chr2 31268962 31269121 -219418733 + L1ME3A LINE L1 5968 6134 -36 265 287 45 32 chr2 31269269 31269426 -219418428 + L2 LINE L2 3122 3280 -33 245 293 24 0 chr2 31269452 31269534 -219418320 + GA-rich Low_complexity Low_complexity 2 85 0 261 304 10 10 chr2 31270715 31270817 -219417037 - Charlie7 DNA MER1_type -3 2609 2508 307 282 107 0 chr2 31270933 31271036 -219416818 - MIR SINE MIR -62 146 33 216 317 30 30 chr2 31272068 31272169 -219415685 - MER5A DNA MER1_type -2 187 87 273 267 178 0 chr2 31272373 31272463 -219415391 + L2 LINE L2 3208 3313 0 243 61 0 0 chr2 31272897 31272930 -219414924 + (TTG)n Simple_repeat Simple_repeat 2 34 0 271 245 75 43 chr2 31273044 31273138 -219414716 - MIR SINE MIR -110 152 56 1586 118 9 129 chr2 31273250 31273582 -219414272 + AluJb SINE Alu 1 292 -20 695 261 16 16 chr2 31273647 31273831 -219414023 + MIR SINE MIR 79 262 0 1976 110 0 7 chr2 31274841 31275123 -219412731 + AluSx SINE Alu 15 294 -18 330 26 0 0 chr2 31276841 31276880 -219410974 + (CA)n Simple_repeat Simple_repeat 2 40 0 200 268 36 36 chr2 31277556 31277668 -219410186 + (TCTCTG)n Simple_repeat Simple_repeat 3 114 0 2127 97 30 0 chr2 31277698 31277996 -219409858 - AluSg SINE Alu -1 309 3 321 287 78 8 chr2 31278692 31278821 -219409033 - MIR3 SINE MIR -7 201 64 2228 71 0 3 chr2 31279140 31279540 -219408314 - AluY SINE Alu 0 399 1 243 267 22 0 chr2 31280118 31280253 -219407601 + CT-rich Low_complexity Low_complexity 1 138 0 968 156 0 36 chr2 31281095 31281262 -219406592 - MER3 DNA MER1_type -27 182 22 530 261 86 60 chr2 31281741 31281975 -219405879 - MIR SINE MIR -21 241 2 221 375 29 10 chr2 31282258 31282362 -219405492 - MER91A DNA MER1_type -2 194 89 215 286 89 27 chr2 31282865 31282977 -219404877 + L2 LINE L2 3185 3303 -10 324 293 17 35 chr2 31282999 31283115 -219404739 + MIR SINE MIR 124 237 -25 21 0 0 0 chr2 31283315 31283336 -219404518 + AT_rich Low_complexity Low_complexity 1 21 0 231 88 0 0 chr2 31283599 31283633 -219404221 + (TA)n Simple_repeat Simple_repeat 1 34 0 564 203 68 8 chr2 31283633 31283742 -219404112 - FLAM_C SINE Alu -183 119 1 26 0 0 0 chr2 31284235 31284261 -219403593 + AT_rich Low_complexity Low_complexity 1 26 0 1783 82 4 0 chr2 31284285 31284516 -219403338 - AluSx SINE Alu -80 232 1 2240 74 7 3 chr2 31285154 31285452 -219402402 - AluSc SINE Alu -9 300 2 23 0 0 0 chr2 31285490 31285513 -219402341 + AT_rich Low_complexity Low_complexity 1 23 0 387 255 150 13 chr2 31286036 31286189 -219401665 + MIR SINE MIR 59 232 -30 461 301 26 13 chr2 31287462 31287618 -219400236 + MLT1L LTR MaLR 144 301 -314 1575 193 50 34 chr2 31288509 31288892 -219398962 + MLT1B LTR MaLR 1 389 -1 308 302 70 8 chr2 31289126 31289255 -219398599 - L1ME LINE L1 -502 5619 5483 2405 87 0 0 chr2 31289283 31289582 -219398272 - AluSq SINE Alu -14 299 1 622 294 128 64 chr2 31289760 31290911 -219396943 - L1ME LINE L1 -768 5378 4155 23 0 0 0 chr2 31291929 31291952 -219395902 + AT_rich Low_complexity Low_complexity 1 23 0 636 286 117 40 chr2 31291969 31292364 -219395490 + L1ME LINE L1 2877 3301 -2845 263 213 16 0 chr2 31292383 31292444 -219395410 + L1MD2 LINE L1 6096 6157 -202 205 194 0 0 chr2 31292765 31292801 -219395053 - MIR SINE MIR -13 249 214 * 263 259 69 35 chr2 31292795 31292911 -219394943 - L2 LINE L2 -2 3270 3151 222 217 301 12 chr2 31292933 31293016 -219394838 - MIR SINE MIR -31 177 71 188 245 75 19 chr2 31293070 31293123 -219394731 + MIR SINE MIR 6 61 -201 16336 127 101 8 chr2 31293433 31295503 -219392351 - L1PBa LINE L1 -2818 4044 2168 2415 82 0 3 chr2 31295503 31295809 -219392045 + AluY SINE Alu 1 305 -6 16336 127 101 8 chr2 31295809 31297431 -219390423 - L1PBa LINE L1 -4694 2168 3 743 173 6 39 chr2 31297438 31297594 -219390260 - MLT1A1 LTR MaLR -214 151 1 457 232 94 29 chr2 31297736 31297874 -219389980 + MLT1C LTR MaLR 6 152 -315 805 264 63 17 chr2 31297900 31298139 -219389715 + MLT1C LTR MaLR 218 467 0 394 259 75 34 chr2 31298448 31298595 -219389259 - MER5A DNA MER1_type 0 189 37 195 354 20 40 chr2 31298681 31298780 -219389074 + MIR SINE MIR 14 110 -152 28 0 0 0 chr2 31298831 31298859 -219388995 + AT_rich Low_complexity Low_complexity 1 28 0 2196 194 95 27 chr2 31299911 31300136 -219387718 + L1ME LINE L1 4120 4328 -1818 1302 84 68 0 chr2 31300136 31300326 -219387528 - L1PA14 LINE L1 -1 6160 5958 2196 194 95 27 chr2 31300326 31300775 -219387079 + L1ME LINE L1 4328 4840 -1306 * 3107 228 75 18 chr2 31300774 31301822 -219386032 + L1ME1 LINE L1 5055 6162 -4 3671 265 155 22 chr2 31303298 31304416 -219383438 + L2 LINE L2 1217 2601 -713 8187 55 1 0 chr2 31304416 31305381 -219382473 + LTR5 LTR ERVK 1 966 -3 3671 265 155 22 chr2 31305381 31305816 -219382038 + L2 LINE L2 2601 2977 -337 197 339 24 94 chr2 31308945 31309072 -219378782 - L2 LINE L2 -44 3228 3111 302 299 187 23 chr2 31309317 31309531 -219378323 + L1ME LINE L1 4809 5057 -1089 496 345 20 12 chr2 31309841 31310031 -219377823 + L1ME LINE L1 5452 5639 -523 6297 113 123 18 chr2 31310031 31310540 -219377314 - Tigger3b DNA MER2_type -1797 1231 777 1858 107 76 0 chr2 31310540 31310802 -219377052 - AluSx SINE Alu -15 297 16 6297 113 123 18 chr2 31310802 31310955 -219376899 - Tigger3b DNA MER2_type -2251 777 641 369 0 0 0 chr2 31310955 31310996 -219376858 + (CA)n Simple_repeat Simple_repeat 2 42 0 6297 113 123 18 chr2 31310996 31311446 -219376408 - Tigger3b DNA MER2_type -2387 641 1 496 345 20 12 chr2 31311446 31311501 -219376353 + L1ME LINE L1 5639 5699 -463 1450 64 0 6 chr2 31311506 31311679 -219376175 + AluY SINE Alu 1 172 -139 6121 114 10 2 chr2 31311679 31312801 -219375053 - L1PA8A LINE L1 -562 5569 4442 1439 122 0 80 chr2 31312801 31313064 -219374790 + MER1B DNA MER1_type 98 339 0 217 195 0 0 chr2 31313833 31313874 -219373980 - L3 LINE CR1 -23 1554 1514 322 302 47 59 chr2 31313908 31314077 -219373777 - L3 LINE CR1 -156 1421 1255 667 37 0 0 chr2 31314158 31314240 -219373614 - AluSc SINE Alu -7 302 221 1005 179 115 8 chr2 31314240 31314474 -219373380 + MER58B DNA MER1_type 77 335 -6 262 259 0 0 chr2 31314501 31314559 -219373295 - L3 LINE CR1 -326 1251 1194 2085 242 122 28 chr2 31314757 31315533 -219372321 - HAL1 LINE L1 -302 2205 1357 361 333 94 28 chr2 31315697 31315910 -219371944 - MIR SINE MIR -25 237 11 216 130 0 0 chr2 31316934 31316980 -219370874 + (TA)n Simple_repeat Simple_repeat 1 46 0 2562 229 27 13 chr2 31317585 31318261 -219369593 + L1PA10 LINE L1 1180 1864 -4282 1878 144 14 22 chr2 31318272 31318632 -219369222 - L1P LINE L1 -2963 3183 2827 20604 125 23 12 chr2 31318646 31319554 -219368300 + L1PA10 LINE L1 1875 2771 -3397 2200 112 6 6 chr2 31319554 31319866 -219367988 + AluSx SINE Alu 1 312 0 20604 125 23 12 chr2 31319866 31323191 -219364663 + L1PA10 LINE L1 2771 6157 -11 1011 129 0 0 chr2 31324895 31325035 -219362819 - AluJb SINE Alu -13 299 160 1384 156 8 0 chr2 31325192 31325436 -219362418 + L1MA4 LINE L1 4559 4804 -1342 3084 148 56 21 chr2 31325436 31326041 -219361813 + L1MA4 LINE L1 5663 6291 -9 1305 154 5 19 chr2 31326341 31326555 -219361299 - AluJb SINE Alu -20 292 82 402 321 153 0 chr2 31326729 31326860 -219360994 - L2 LINE L2 0 3272 3122 297 317 97 41 chr2 31327077 31327222 -219360632 + L2 LINE L2 3114 3266 -6 245 259 139 28 chr2 31327471 31327579 -219360275 - MIR SINE MIR -13 249 130 209 33 33 0 chr2 31328286 31328316 -219359538 + (TA)n Simple_repeat Simple_repeat 2 32 0 2153 104 3 44 chr2 31329935 31330251 -219357603 + AluSp SINE Alu 1 303 -10 225 377 0 0 chr2 31331587 31331656 -219356198 - L3b LINE CR1 -3 1580 1512 210 356 100 21 chr2 31331670 31331951 -219355903 - L2 LINE L2 -1298 2016 1714 1215 204 106 73 chr2 31332243 31332572 -219355282 + MLT1C LTR MaLR 59 405 -62 2064 65 52 14 chr2 31332572 31332863 -219354991 - AluY SINE Alu -9 302 1 1215 204 106 73 chr2 31332863 31332929 -219354925 + MLT1C LTR MaLR 405 467 0 189 0 0 0 chr2 31333865 31333886 -219353968 + (T)n Simple_repeat Simple_repeat 1 21 0 1577 114 21 0 chr2 31334691 31334928 -219352926 + L1PA8A LINE L1 5886 6127 -4 205 216 0 39 chr2 31336611 31336662 -219351192 + G-rich Low_complexity Low_complexity 2 50 0 189 200 0 44 chr2 31336708 31336753 -219351101 - L2 LINE L2 -94 3219 3177 3485 146 30 6 chr2 31336788 31337412 -219350442 - L1MA5 LINE L1 -3 6297 5659 183 318 191 21 chr2 31338114 31338444 -219349410 + L2 LINE L2 1565 1950 -1364 184 75 25 50 chr2 31339796 31339836 -219348018 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 207 0 0 0 chr2 31341024 31341047 -219346807 + (GAA)n Simple_repeat Simple_repeat 2 24 0 449 337 72 47 chr2 31391456 31391735 -219296119 + L2 LINE L2 2926 3211 -61 2047 203 52 29 chr2 31391842 31392364 -219295490 + MLT1F LTR MaLR 1 534 -8 185 298 99 8 chr2 31393118 31393239 -219294615 - L2 LINE L2 -196 3076 2945 * 217 267 14 144 chr2 31393226 31393372 -219294482 + MIR SINE MIR 17 139 -69 287 255 92 64 chr2 31393504 31393645 -219294209 + MIR SINE MIR 92 236 -26 422 284 154 6 chr2 31393831 31393993 -219293861 + MIR SINE MIR 20 205 -57 297 297 101 29 chr2 31394433 31394571 -219293283 - MIR3 SINE MIR -56 152 5 482 259 192 5 chr2 31395999 31396192 -219291662 - MIR SINE MIR -6 256 28 558 318 106 61 chr2 31398003 31398446 -219289408 + L2 LINE L2 2809 3271 -1 1257 206 38 3 chr2 31398900 31399213 -219288641 + MER33 DNA MER1_type 1 316 -8 345 100 0 0 chr2 31400147 31400197 -219287657 + (TG)n Simple_repeat Simple_repeat 1 50 0 221 348 281 0 chr2 31400368 31400546 -219287308 - MIR SINE MIR 0 262 35 2255 117 0 3 chr2 31400639 31400946 -219286908 - AluSx SINE Alu -6 306 1 246 317 132 30 chr2 31401923 31402090 -219285764 + MIR SINE MIR 69 252 -10 208 246 77 31 chr2 31402281 31402346 -219285508 - L2 LINE L2 -4 3309 3242 563 269 129 0 chr2 31403997 31404168 -219283686 - MIR SINE MIR -5 257 65 186 243 0 0 chr2 31404236 31404273 -219283581 + MIR SINE MIR 113 149 -113 1639 119 70 0 chr2 31404355 31404599 -219283255 + AluSq SINE Alu 1 261 -52 306 282 0 24 chr2 31405334 31405419 -219282435 - MIR3 SINE MIR -22 186 104 1672 275 121 15 chr2 31405647 31406377 -219281477 + L1ME3A LINE L1 5359 6165 -5 366 80 0 0 chr2 31407334 31407384 -219280470 + (CA)n Simple_repeat Simple_repeat 2 51 0 308 365 9 0 chr2 31407453 31407560 -219280294 + MIR SINE MIR 28 135 -73 237 304 99 67 chr2 31408098 31408381 -219279473 + L2 LINE L2 2816 3107 -165 316 322 144 0 chr2 31408568 31408686 -219279168 + L2 LINE L2 3133 3267 -5 282 116 0 0 chr2 31408687 31408730 -219279124 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 462 88 0 0 chr2 31410151 31410219 -219277635 - MADE1 DNA Mariner -12 68 1 276 292 45 0 chr2 31410592 31410681 -219277173 - MIR3 SINE MIR -34 174 82 257 106 0 21 chr2 31411255 31411302 -219276552 + (TCC)n Simple_repeat Simple_repeat 3 48 0 903 177 5 91 chr2 31412262 31412460 -219275394 - MER5A DNA MER1_type -2 187 7 580 189 0 0 chr2 31412477 31412579 -219275275 + MER5A DNA MER1_type 4 105 -84 208 310 0 14 chr2 31412695 31412766 -219275088 - MER5B DNA MER1_type -102 76 7 343 289 0 22 chr2 31413119 31413209 -219274645 + L1MC4 LINE L1 6614 6701 -1341 200 158 18 0 chr2 31413213 31413270 -219274584 + (TA)n Simple_repeat Simple_repeat 2 59 0 646 262 34 48 chr2 31413273 31413479 -219274375 - MIR SINE MIR -58 204 2 888 177 52 10 chr2 31413619 31413811 -219274043 + MER20 DNA MER1_type 20 219 0 291 309 12 0 chr2 31415161 31415242 -219272612 - MIR3 SINE MIR -6 202 121 832 311 26 0 chr2 31416752 31416980 -219270874 - MIR SINE MIR -8 254 21 297 318 40 32 chr2 31417274 31417400 -219270454 - MIR3 SINE MIR -46 162 36 191 339 97 24 chr2 31418513 31418637 -219269217 - L2 LINE L2 -213 3059 2927 246 135 0 0 chr2 31418647 31418684 -219269170 - MLT2D LTR ERVL 0 414 378 423 0 0 0 chr2 31418686 31418733 -219269121 + (TG)n Simple_repeat Simple_repeat 2 48 0 1735 133 10 24 chr2 31418762 31419055 -219268799 + MER7A DNA MER2_type 14 300 -46 1829 153 17 24 chr2 31419055 31419349 -219268505 - AluJo SINE Alu -18 294 3 1216 183 256 38 chr2 31419376 31419770 -219268084 - MLT2B1 LTR ERVL -40 480 1 22 0 0 0 chr2 31420520 31420542 -219267312 + AT_rich Low_complexity Low_complexity 1 22 0 261 290 35 10 chr2 31420608 31420705 -219267149 - MIR SINE MIR -55 153 51 1671 106 166 15 chr2 31421246 31421577 -219266277 - L1MA7 LINE L1 0 6291 5911 550 149 116 0 chr2 31421559 31421680 -219266174 + L1MA7 LINE L1 5783 5917 -374 * 495 253 71 76 chr2 31422163 31422361 -219265493 - MIR SINE MIR -57 205 9 546 335 73 17 chr2 31422713 31423000 -219264854 - L3 LINE CR1 -53 1524 1222 190 279 0 0 chr2 31423249 31423292 -219264562 - MIR SINE MIR -2 260 218 1765 199 43 53 chr2 31423954 31423991 -219263863 - MLT2D LTR ERVL 0 414 378 351 0 0 0 chr2 31423991 31424030 -219263824 + (TG)n Simple_repeat Simple_repeat 2 40 0 1765 199 43 53 chr2 31424030 31424410 -219263444 - MLT2D LTR ERVL -36 378 1 418 209 55 27 chr2 31424467 31424577 -219263277 - MIR SINE MIR -74 188 76 596 253 58 67 chr2 31425055 31425367 -219262487 + L1MEd LINE L1 560 868 -5251 260 128 0 0 chr2 31425356 31425403 -219262451 + L1PB4 LINE L1 6108 6154 -2 * 311 303 50 76 chr2 31425561 31425702 -219262152 - MIR SINE MIR -50 212 76 2171 122 0 3 chr2 31425702 31425997 -219261857 + AluSx SINE Alu 1 294 -18 311 303 50 76 chr2 31425997 31426053 -219261801 - MIR SINE MIR -186 76 20 690 276 62 0 chr2 31429906 31430116 -219257738 - MIR SINE MIR -6 256 34 1740 162 3 40 chr2 31431656 31431952 -219255902 - AluJo SINE Alu -27 285 1 232 67 0 44 chr2 31432622 31432667 -219255187 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 1341 288 105 65 chr2 31432824 31433537 -219254317 + L2 LINE L2 1942 2625 -689 2130 134 0 7 chr2 31433537 31433843 -219254011 - AluSx SINE Alu -8 304 1 1341 288 105 65 chr2 31433843 31433873 -219253981 + L2 LINE L2 2625 2652 -662 2260 79 11 0 chr2 31433873 31434002 -219253852 + AluY SINE Alu 1 127 -184 180 0 0 0 chr2 31434002 31434022 -219253832 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2260 79 11 0 chr2 31434022 31434172 -219253682 + AluY SINE Alu 127 283 -28 1341 288 105 65 chr2 31434172 31434417 -219253437 + L2 LINE L2 2652 2971 -343 337 262 76 69 chr2 31434619 31434853 -219253001 + MIR SINE MIR 16 248 -14 250 276 67 48 chr2 31434911 31435016 -219252838 + MIR SINE MIR 45 151 -57 218 183 0 141 chr2 31435748 31435819 -219252035 + L2 LINE L2 2757 2817 -497 203 263 17 17 chr2 31436280 31436398 -219251456 + A-rich Low_complexity Low_complexity 1 118 0 286 200 0 0 chr2 31436620 31436675 -219251179 + MIR SINE MIR 51 105 -103 1326 268 46 21 chr2 31436702 31437221 -219250633 + HAL1b LINE L1 86 617 -731 541 239 86 0 chr2 31437319 31437482 -219250372 + HAL1b LINE L1 625 801 -547 696 243 74 5 chr2 31437580 31437769 -219250085 + MIR SINE MIR 47 248 -14 551 203 62 23 chr2 31438192 31438320 -219249534 + MIR3 SINE MIR 39 171 -37 2326 110 0 7 chr2 31438563 31438872 -219248982 + AluSq SINE Alu 1 307 -6 1726 218 62 12 chr2 31439020 31439443 -219248411 + L1MC4a LINE L1 7141 7584 -224 1594 162 82 75 chr2 31439617 31439993 -219247861 - MLT1B LTR MaLR -11 379 1 539 243 320 23 chr2 31440073 31440423 -219247431 + LTR16A1 LTR ERVL 4 457 0 238 258 48 0 chr2 31440431 31440493 -219247361 + MIR SINE MIR 197 261 -1 244 271 201 22 chr2 31440494 31440685 -219247169 - MIR SINE MIR -25 237 4 22 0 0 0 chr2 31440989 31441011 -219246843 + AT_rich Low_complexity Low_complexity 1 22 0 1856 144 98 14 chr2 31441836 31442182 -219245672 - THE1C LTR MaLR 0 375 1 23 0 0 0 chr2 31442207 31442230 -219245624 + AT_rich Low_complexity Low_complexity 1 23 0 251 286 0 14 chr2 31442563 31442633 -219245221 - MIR SINE MIR -36 226 158 408 272 62 43 chr2 31443263 31443425 -219244429 + MIR SINE MIR 48 212 -50 951 198 5 77 chr2 31444812 31444847 -219243007 + MER58A DNA MER1_type 19 55 -2365 2170 118 0 3 chr2 31444847 31445161 -219242693 - AluSq SINE Alu 0 313 1 951 198 5 77 chr2 31445161 31445347 -219242507 + MER58A DNA MER1_type 55 224 0 348 328 12 57 chr2 31445351 31445529 -219242325 + MIR SINE MIR 16 187 -58 306 0 0 0 chr2 31446704 31446738 -219241116 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 2298 261 184 17 chr2 31446873 31448090 -219239764 + L2 LINE L2 1549 2968 -346 585 267 118 15 chr2 31448152 31448347 -219239507 + L2 LINE L2 3095 3309 -4 320 333 65 8 chr2 31448460 31448583 -219239271 + MIR3 SINE MIR 1 130 -78 524 313 101 10 chr2 31448679 31448877 -219238977 - MIR SINE MIR -40 222 7 1486 182 50 87 chr2 31449252 31449653 -219238201 - MLT2C1 LTR ERVL -11 386 1 414 273 129 0 chr2 31450192 31450331 -219237523 + MIR3 SINE MIR 50 206 -2 1850 136 51 0 chr2 31450705 31451000 -219236854 + AluSq SINE Alu 1 310 -3 288 0 0 0 chr2 31451442 31451474 -219236380 + (TG)n Simple_repeat Simple_repeat 1 32 0 348 321 66 29 chr2 31452645 31452782 -219235072 + MIR3 SINE MIR 17 158 -50 257 323 106 50 chr2 31453049 31453210 -219234644 + MLT1J LTR MaLR 106 275 -236 236 281 146 22 chr2 31454224 31454313 -219233541 - MLT2E LTR ERVL -485 143 44 392 300 57 7 chr2 31457311 31457451 -219230403 + L2 LINE L2 2219 2365 -949 319 281 86 50 chr2 31457533 31457672 -219230182 - MIR SINE MIR -71 191 48 290 319 52 84 chr2 31457639 31457984 -219229870 + L2 LINE L2 2441 2774 -540 * 5987 218 79 40 chr2 31458087 31459048 -219228806 - L1M4 LINE L1 -2945 3699 2777 2783 102 37 5 chr2 31459048 31459109 -219228745 + L1PA13 LINE L1 5714 5772 -391 276 30 0 0 chr2 31459109 31459142 -219228712 + (TG)n Simple_repeat Simple_repeat 2 34 0 492 86 0 0 chr2 31459144 31459214 -219228640 + (CA)n Simple_repeat Simple_repeat 2 71 0 2783 102 37 5 chr2 31459214 31459580 -219228274 + L1PA13 LINE L1 5772 6158 -5 5987 218 79 40 chr2 31459580 31461621 -219226233 - L1M4 LINE L1 -3867 2777 817 180 0 0 0 chr2 31461621 31461641 -219226213 + (TA)n Simple_repeat Simple_repeat 2 21 0 2183 114 3 0 chr2 31461641 31461948 -219225906 - AluSx SINE Alu -3 309 2 5987 218 79 40 chr2 31461948 31462303 -219225551 - L1M4 LINE L1 -5827 817 477 1911 132 10 3 chr2 31462303 31462599 -219225255 - AluSx SINE Alu -14 298 1 5987 218 79 40 chr2 31462599 31462755 -219225099 - L1M4 LINE L1 -6167 477 14 348 208 198 0 chr2 31462912 31463013 -219224841 - MIR SINE MIR -68 194 74 202 224 82 122 chr2 31463072 31463219 -219224635 - L3b LINE CR1 -147 1436 1296 199 320 70 31 chr2 31464888 31465016 -219222838 - L2 LINE L2 -191 3081 2949 2203 246 47 39 chr2 31466118 31466963 -219220891 + L2 LINE L2 2376 3235 -78 328 338 149 7 chr2 31467246 31467394 -219220460 - L2 LINE L2 -1 3271 3103 1604 168 34 24 chr2 31468194 31468486 -219219368 + AluJb SINE Alu 4 298 -14 2075 112 7 0 chr2 31469022 31469318 -219218536 - AluSx SINE Alu -14 298 1 554 271 115 28 chr2 31469561 31469779 -219218075 - MIR SINE MIR 0 262 26 2255 79 0 10 chr2 31469780 31470083 -219217771 - AluSg SINE Alu -10 300 1 273 384 13 38 chr2 31470436 31470595 -219217259 - MIR SINE MIR -57 205 51 398 290 105 25 chr2 31471222 31471384 -219216470 + MER5A DNA MER1_type 1 175 -14 1050 257 16 0 chr2 31474072 31474329 -219213525 + L1MD3 LINE L1 7729 7989 -6 2521 158 36 11 chr2 31474776 31475226 -219212628 + MLT2C2 LTR ERVL 3 463 -1 530 242 146 0 chr2 31476306 31476471 -219211383 + MER53 DNA DNA 1 189 0 433 215 62 31 chr2 31477559 31477689 -219210165 - L2 LINE L2 -1 3271 3138 377 296 262 4 chr2 31477862 31478129 -219209725 + L2 LINE L2 2978 3313 0 499 274 27 59 chr2 31479616 31479802 -219208052 - MER5A DNA MER1_type -3 186 7 938 222 90 15 chr2 31480128 31480394 -219207460 - Charlie4a DNA MER1_type 0 508 223 3021 110 16 9 chr2 31480395 31480848 -219207006 + L1PA16 LINE L1 5702 6157 -9 392 264 0 11 chr2 31480856 31480947 -219206907 + L1MC4 LINE L1 6614 6703 -1339 227 246 18 0 chr2 31480965 31481022 -219206832 + (TA)n Simple_repeat Simple_repeat 1 58 0 656 254 142 44 chr2 31481288 31481761 -219206093 + LTR33 LTR ERVL 3 521 0 363 297 39 39 chr2 31481766 31481921 -219205933 + MIR SINE MIR 74 228 -34 828 138 90 7 chr2 31482969 31483114 -219204740 + MLT1A1 LTR MaLR 3 159 -206 1029 150 6 0 chr2 31483114 31483281 -219204573 + FRAM SINE Alu 1 167 -9 1137 182 57 0 chr2 31483285 31483494 -219204360 + MLT1A1 LTR MaLR 145 365 0 225 382 21 7 chr2 31483612 31483756 -219204098 - MIR SINE MIR -75 187 42 280 319 112 61 chr2 31484681 31485336 -219202518 + L2 LINE L2 2288 2975 -339 7313 97 6 1 chr2 31485606 31487431 -219200423 - L1PA8 LINE L1 -5 6167 4336 21 0 0 0 chr2 31488730 31488751 -219199103 + AT_rich Low_complexity Low_complexity 1 21 0 366 288 73 57 chr2 31488883 31489060 -219198794 + MIR SINE MIR 49 228 -34 210 200 29 100 chr2 31489342 31489412 -219198442 + MIR3 SINE MIR 4 68 -140 368 292 69 15 chr2 31489484 31489614 -219198240 + MIR SINE MIR 1 137 -125 22 0 0 0 chr2 31489960 31489982 -219197872 + GC_rich Low_complexity Low_complexity 1 22 0 275 291 201 8 chr2 31491292 31491426 -219196428 - MIR SINE MIR -64 198 39 2070 121 0 63 chr2 31491760 31492091 -219195763 + AluSx SINE Alu 1 310 -2 2215 172 24 26 chr2 31492287 31492740 -219195114 + L1MB8 LINE L1 5727 6178 0 589 293 13 46 chr2 31492933 31493172 -219194682 - MIR SINE MIR -16 246 16 1980 115 3 23 chr2 31494507 31494812 -219193042 + L1PB1 LINE L1 5851 6149 -2 599 219 129 0 chr2 31495340 31495495 -219192359 - MER45A DNA AcHobo 0 178 4 495 48 0 0 chr2 31495819 31495881 -219191973 + (CA)n Simple_repeat Simple_repeat 1 62 0 310 345 7 14 chr2 31495911 31496056 -219191798 + CT-rich Low_complexity Low_complexity 1 144 0 203 301 14 14 chr2 31496146 31496219 -219191635 - L3 LINE CR1 -21 1556 1484 519 294 54 20 chr2 31496645 31496849 -219191005 + MIR SINE MIR 48 258 -4 553 291 236 11 chr2 31496866 31497441 -219190413 - L2 LINE L2 -13 3300 2589 301 267 147 0 chr2 31497761 31497877 -219189977 + MIR SINE MIR 20 152 -110 1281 211 120 88 chr2 31497974 31498439 -219189415 - MLT1H LTR MaLR -48 501 22 2558 142 26 21 chr2 31498499 31498923 -219188931 + MSTB LTR MaLR 1 426 0 254 297 119 0 chr2 31499469 31499570 -219188284 + L2 LINE L2 3160 3272 0 181 240 106 39 chr2 31499635 31499739 -219188115 + L3 LINE CR1 1162 1272 -305 334 277 32 13 chr2 31499791 31499930 -219187924 - MIR SINE MIR -75 133 44 186 43 0 0 chr2 31500163 31500186 -219187668 + (TA)n Simple_repeat Simple_repeat 2 24 0 365 301 89 0 chr2 31500312 31500435 -219187419 + MER94 DNA DNA 1 134 0 308 230 88 47 chr2 31500641 31500789 -219187065 - MIR SINE MIR -37 225 72 2655 161 20 13 chr2 31502828 31503282 -219184572 + LTR32 LTR ERVL 15 471 0 693 181 99 0 chr2 31503817 31503988 -219183866 - MER53 DNA DNA -1 188 1 222 235 163 51 chr2 31504164 31504262 -219183592 + MIR3 SINE MIR 5 113 -95 2382 110 0 0 chr2 31506293 31506602 -219181252 + AluSc SINE Alu 1 309 0 373 274 29 0 chr2 31506638 31506740 -219181114 + MER81 DNA DNA 1 105 -9 208 250 36 18 chr2 31507589 31507645 -219180209 + MIR SINE MIR 19 75 -133 210 130 43 22 chr2 31507746 31507792 -219180062 - MIR SINE MIR -109 153 107 298 251 126 60 chr2 31508180 31508297 -219179557 + MIR SINE MIR 65 198 -64 2268 104 0 10 chr2 31508297 31508595 -219179259 + AluSx SINE Alu 1 295 -17 298 251 126 60 chr2 31508595 31508644 -219179210 + MIR SINE MIR 198 242 -20 2346 116 14 11 chr2 31509330 31509693 -219178161 - THE1B LTR MaLR 0 364 1 274 219 0 4 chr2 31510011 31510080 -219177774 + MIR SINE MIR 84 132 -76 181 359 31 0 chr2 31510370 31510434 -219177420 + L3b LINE CR1 1508 1573 -10 * 412 266 77 73 chr2 31510433 31510760 -219177094 - L2 LINE L2 -79 3234 2907 346 266 72 113 chr2 31510782 31511325 -219176529 - L2 LINE L2 -905 2409 1900 2080 169 3 14 chr2 31511325 31511692 -219176162 + MLT1A1 LTR MaLR 1 363 -2 346 266 72 113 chr2 31511692 31511855 -219175999 - L2 LINE L2 -1414 1900 1732 238 188 59 79 chr2 31512118 31512219 -219175635 + MLT1E LTR MaLR 477 575 -18 417 325 53 29 chr2 31512248 31512624 -219175230 - L2 LINE L2 -1580 1734 1350 2253 98 34 0 chr2 31514037 31514333 -219173521 - AluSq SINE Alu -3 310 5 200 281 62 0 chr2 31514376 31514440 -219173414 + MIR SINE MIR 124 191 -71 1729 197 21 3 chr2 31514690 31515025 -219172829 + MER58B DNA MER1_type 1 341 0 1250 199 9 5 chr2 31515106 31515322 -219172532 - MLT1A1 LTR MaLR 0 365 149 2009 152 38 34 chr2 31515322 31515820 -219172034 + MLT2A2 LTR ERVL 1 514 -40 180 0 0 0 chr2 31515820 31515840 -219172014 + (TA)n Simple_repeat Simple_repeat 2 21 0 2009 152 38 34 chr2 31515840 31515882 -219171972 + MLT2A2 LTR ERVL 514 554 0 785 180 27 0 chr2 31515882 31516031 -219171823 - MLT1A1 LTR MaLR -212 153 1 336 301 260 0 chr2 31516129 31516302 -219171552 + L3 LINE CR1 1247 1464 -113 617 75 0 0 chr2 31516386 31516466 -219171388 + MADE1 DNA Mariner 1 80 0 1364 139 109 130 chr2 31517550 31518010 -219169844 + LTR7 LTR ERV1 1 450 0 212 287 62 16 chr2 31518347 31518476 -219169378 + MIR3 SINE MIR 24 158 -50 210 238 88 25 chr2 31519305 31519385 -219168469 + MIR SINE MIR 75 159 -103 1979 181 47 66 chr2 31519385 31519900 -219167954 - MLT1D LTR MaLR 0 505 1 184 309 106 21 chr2 31519938 31520032 -219167822 + MIR3 SINE MIR 71 172 -36 197 83 28 0 chr2 31520348 31520384 -219167470 + (CCA)n Simple_repeat Simple_repeat 1 37 0 285 265 141 16 chr2 31520962 31521147 -219166707 - L2 LINE L2 0 3313 3106 284 286 125 24 chr2 31521390 31521558 -219166296 + MIR3 SINE MIR 20 204 -4 2416 145 23 51 chr2 31522175 31522609 -219165245 - Tigger2a DNA MER2_type 0 434 13 602 312 112 27 chr2 31522700 31523709 -219164145 - L1MC/D LINE L1 -743 5403 4309 1131 187 35 0 chr2 31523709 31523912 -219163942 + MER6B DNA MER2_type 1 210 0 602 312 112 27 chr2 31523912 31524226 -219163628 - L1MC/D LINE L1 -1837 4309 4023 2206 160 14 0 chr2 31524284 31524640 -219163214 - MER47A DNA MER2_type 0 366 6 404 284 173 11 chr2 31524687 31524958 -219162896 - L1P LINE L1 -2192 3954 3640 1082 299 114 51 chr2 31524994 31525297 -219162557 - L1MC/D LINE L1 -2616 3530 3247 2538 98 21 24 chr2 31525297 31525673 -219162181 + THE1C LTR MaLR 1 375 0 1082 299 114 51 chr2 31525673 31526672 -219161182 - L1MC/D LINE L1 -2899 3247 2147 1273 260 115 37 chr2 31527183 31527729 -219160125 - HAL1b LINE L1 -415 933 345 4036 259 105 39 chr2 31527770 31529021 -219158833 - L1MC4 LINE L1 -2 8040 6674 2101 125 3 0 chr2 31529021 31529308 -219158546 + AluSx SINE Alu 23 310 -2 4036 259 105 39 chr2 31529308 31529538 -219158316 - L1MC4 LINE L1 -1368 6674 6461 243 262 131 0 chr2 31529833 31529955 -219157899 - HAL1b LINE L1 -1125 223 86 491 240 175 7 chr2 31530491 31530645 -219157209 + L1ME3A LINE L1 5988 6167 -3 258 339 78 17 chr2 31532422 31532602 -219155252 + MIR3 SINE MIR 11 201 -7 194 373 0 0 chr2 31534908 31534967 -219152887 + L2 LINE L2 3206 3264 -8 4040 99 45 2 chr2 31537213 31537769 -219150085 + LTR19B LTR ERV1 1 580 0 250 281 117 61 chr2 31538100 31538510 -219149344 + HAL1 LINE L1 1109 1541 -966 1904 149 0 19 chr2 31538520 31538828 -219149026 + AluJo SINE Alu 1 302 -10 1214 171 151 16 chr2 31539331 31539583 -219148271 + AluJo SINE Alu 2 287 -25 307 303 121 29 chr2 31539789 31540070 -219147784 + L1MEc LINE L1 2168 2474 -3922 351 337 71 51 chr2 31540112 31540318 -219147536 + L1MEc LINE L1 2538 2738 -3477 2123 110 27 7 chr2 31540318 31540618 -219147236 + AluSp SINE Alu 1 306 -7 351 337 71 51 chr2 31540618 31540986 -219146868 + L1MEc LINE L1 2738 3119 -3096 412 324 134 3 chr2 31541005 31541295 -219146559 + L1MEc LINE L1 3207 3534 -2681 524 249 137 46 chr2 31541384 31541669 -219146185 - MLT1J1 LTR MaLR -120 326 16 328 296 128 14 chr2 31541730 31542075 -219145779 + L1MEc LINE L1 3595 3978 -2237 300 328 127 32 chr2 31542091 31542399 -219145455 + L1MEc LINE L1 4016 4352 -1863 1108 290 84 46 chr2 31542408 31543430 -219144424 + L1MEc LINE L1 4836 5399 -816 2846 7 0 0 chr2 31543430 31543735 -219144119 + AluY SINE Alu 1 305 -6 1108 290 84 46 chr2 31543735 31543811 -219144043 + L1MEc LINE L1 5399 5471 -744 2199 107 3 0 chr2 31544121 31544411 -219143443 - AluSx SINE Alu -21 291 1 409 244 199 6 chr2 31546059 31546215 -219141639 - MER5A DNA MER1_type 0 189 4 1246 177 38 56 chr2 31546331 31546455 -219141399 - MER58B DNA MER1_type -2113 307 182 2472 66 0 3 chr2 31546455 31546757 -219141097 + AluY SINE Alu 1 301 -10 1246 177 38 56 chr2 31546757 31546898 -219140956 - MER58B DNA MER1_type -2238 182 47 213 294 81 23 chr2 31548004 31548101 -219139753 + MIR SINE MIR 50 150 -61 628 137 0 0 chr2 31548167 31548262 -219139592 - AluSg/x SINE Alu -3 309 215 228 276 17 0 chr2 31548341 31548399 -219139455 + MIR SINE MIR 156 214 -48 333 317 83 46 chr2 31549896 31550136 -219137718 + MIR SINE MIR 8 256 -6 949 203 102 4 chr2 31550599 31550835 -219137019 - L1ME3A LINE L1 0 6170 5912 1385 194 52 26 chr2 31550836 31551145 -219136709 + MER58B DNA MER1_type 17 333 -8 533 205 25 16 chr2 31551174 31551296 -219136558 - L1ME3A LINE L1 -497 5673 5551 23 33 0 0 chr2 31552507 31552537 -219135317 + AT_rich Low_complexity Low_complexity 1 30 0 341 312 16 32 chr2 31552737 31552862 -219134992 + MIR SINE MIR 70 192 -70 582 118 0 0 chr2 31554290 31554383 -219133471 + (TG)n Simple_repeat Simple_repeat 2 94 0 189 0 0 0 chr2 31555842 31555863 -219131991 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 3822 142 36 69 chr2 31556126 31556840 -219131014 + LTR8 LTR ERV1 1 691 0 239 355 50 14 chr2 31558384 31558525 -219129329 - MIR SINE MIR -114 148 3 267 79 0 0 chr2 31559526 31559564 -219128290 + (GA)n Simple_repeat Simple_repeat 1 38 0 249 279 72 27 chr2 31559566 31559677 -219128177 + MIR SINE MIR 16 131 -77 180 356 0 61 chr2 31560079 31560194 -219127660 - L2 LINE L2 -231 3041 2934 420 225 108 36 chr2 31560205 31560316 -219127538 - L2 LINE L2 -16 3256 3138 207 339 172 42 chr2 31560366 31561370 -219126484 - L2 LINE L2 -423 2891 1757 466 368 73 42 chr2 31561403 31561854 -219126000 - L2 LINE L2 0 3272 2808 656 284 177 36 chr2 31562175 31562734 -219125120 + L1MB7 LINE L1 3145 3782 -2364 3991 206 66 15 chr2 31562736 31564483 -219123371 + L1MB7 LINE L1 4334 6168 -16 657 279 110 62 chr2 31564575 31565264 -219122590 + L1ME4a LINE L1 5255 5964 -157 232 285 98 65 chr2 31565311 31565434 -219122420 - L2 LINE L2 -613 2701 2575 310 265 0 12 chr2 31566120 31566203 -219121651 - MIR SINE MIR -94 168 87 202 346 64 0 chr2 31566337 31566415 -219121439 - L2 LINE L2 -1 3271 3189 220 286 78 0 chr2 31566425 31566502 -219121352 - L2 LINE L2 -53 3219 3137 1015 188 12 0 chr2 31566565 31566735 -219121119 - AluJo SINE Alu -19 293 122 1547 111 9 9 chr2 31566785 31567011 -219120843 + MSTA LTR MaLR 1 226 -202 9220 165 16 3 chr2 31567011 31568538 -219119316 + L1MA3 LINE L1 1181 2727 -4838 741 82 0 0 chr2 31568540 31568638 -219119216 + L1PA5 LINE L1 1 98 -6048 * 16069 61 5 2 chr2 31568636 31570703 -219117151 + L1PA5 LINE L1 847 2918 -3228 1677 52 9 5 chr2 31570703 31570909 -219116945 + L1PA4 LINE L1 5943 6154 -1 * 21245 39 3 1 chr2 31570898 31574115 -219113739 + L1PA5 LINE L1 2913 6139 -15 14125 152 22 27 chr2 31574143 31576927 -219110927 + L1MA3 LINE L1 4004 6777 -947 2174 116 0 26 chr2 31576927 31577237 -219110617 - AluSx SINE Alu -7 305 4 14125 152 22 27 chr2 31577237 31578181 -219109673 + L1MA3 LINE L1 6777 7724 0 2091 136 3 0 chr2 31578280 31578574 -219109280 - AluSx SINE Alu -17 295 1 2513 46 0 26 chr2 31578580 31578884 -219108970 - AluY SINE Alu -15 296 1 352 234 200 88 chr2 31580002 31580481 -219107373 - MLT1H LTR MaLR -16 533 1 23 0 0 0 chr2 31581104 31581127 -219106727 + AT_rich Low_complexity Low_complexity 1 23 0 559 251 152 0 chr2 31581281 31581452 -219106402 + MIR SINE MIR 25 221 -41 207 0 0 0 chr2 31582220 31582243 -219105611 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1506 203 0 31 chr2 31582245 31582535 -219105319 - AluJb SINE Alu -31 281 1 2282 84 3 14 chr2 31583532 31583828 -219104026 + AluSq SINE Alu 1 293 -20 183 237 0 0 chr2 31583894 31583932 -219103922 + MIR SINE MIR 107 144 -64 191 279 98 49 chr2 31584010 31584132 -219103722 + MIR SINE MIR 125 252 -10 187 304 0 0 chr2 31584150 31584206 -219103648 + MIR3 SINE MIR 151 206 -2 657 242 0 0 chr2 31584755 31584887 -219102967 - MER3 DNA MER1_type -77 132 1 218 264 100 45 chr2 31585005 31585115 -219102739 + MIR SINE MIR 26 141 -67 251 241 79 44 chr2 31585996 31586117 -219101737 + MIR SINE MIR 22 144 -64 312 291 133 33 chr2 31586403 31586554 -219101300 - L3 LINE CR1 -5 1572 1407 505 204 19 0 chr2 31586730 31586838 -219101016 + MER117 DNA MER1_type 36 145 -52 350 301 59 36 chr2 31586956 31587175 -219100679 + MLT1K LTR MaLR 7 230 -358 480 282 98 39 chr2 31587289 31587523 -219100331 + MLT1L LTR MaLR 345 592 -23 270 311 149 6 chr2 31587537 31587698 -219100156 - L3 LINE CR1 -263 1314 1131 372 141 0 6 chr2 31588316 31588383 -219099471 + AluSq SINE Alu 1 55 -246 2881 3 0 6 chr2 31588383 31588696 -219099158 + AluYa5 SINE Alu 1 311 0 1814 132 8 0 chr2 31588696 31588961 -219098893 + AluSq SINE Alu 44 311 -2 463 101 25 0 chr2 31588961 31589040 -219098814 + GA-rich Low_complexity Low_complexity 1 81 0 4293 148 30 26 chr2 31589238 31590001 -219097853 - L1MB4 LINE L1 0 6180 5415 269 302 168 13 chr2 31590245 31590394 -219097460 + MIR SINE MIR 84 255 -7 466 323 18 6 chr2 31590793 31590960 -219096894 - MIR SINE MIR -61 201 33 186 299 15 15 chr2 31591694 31591761 -219096093 + MIR SINE MIR 68 134 -128 2432 160 38 7 chr2 31591926 31592345 -219095509 + MSTB1 LTR MaLR 1 432 0 376 258 57 16 chr2 31592466 31592590 -219095264 + MIR SINE MIR 20 148 -114 995 251 184 0 chr2 31592606 31593013 -219094841 + L2 LINE L2 2608 3072 -241 930 160 105 6 chr2 31593014 31593195 -219094659 + AluJo SINE Alu 1 199 -113 371 261 115 0 chr2 31593213 31593343 -219094511 - L1ME LINE L1 -375 5680 5536 1852 221 70 10 chr2 31593624 31594237 -219093617 - L1ME LINE L1 -2099 3981 3299 * 4184 116 4 4 chr2 31594208 31595263 -219092591 - L1P4 LINE L1 -397 5705 4653 * 10151 127 6 0 chr2 31595259 31596814 -219091040 + L1P LINE L1 2988 4552 -1594 2013 264 51 43 chr2 31596812 31598431 -219089423 - L1ME LINE L1 -4471 1609 20 * 308 323 219 0 chr2 31598903 31599095 -219088759 + MIR SINE MIR 20 253 -9 184 288 85 0 chr2 31601265 31601324 -219086530 + L2 LINE L2 3204 3267 -5 678 360 96 36 chr2 31601723 31602463 -219085391 + L2 LINE L2 1881 2664 -650 457 245 38 38 chr2 31602801 31602960 -219084894 - L1MC5 LINE L1 -47 7914 7756 209 267 0 0 chr2 31603827 31603872 -219083982 + G-rich Low_complexity Low_complexity 2 46 0 401 267 120 27 chr2 31604029 31604179 -219083675 + MER69A DNA AcHobo 1 164 -13 212 296 0 14 chr2 31604206 31604277 -219083577 + CT-rich Low_complexity Low_complexity 3 72 0 4217 166 63 24 chr2 31606631 31607796 -219080058 - L1MB5 LINE L1 -1 6173 4960 598 265 47 31 chr2 31608174 31608431 -219079423 + MIR SINE MIR 2 262 0 194 250 210 89 chr2 31609435 31609559 -219078295 - MIR SINE MIR -70 192 54 389 328 53 10 chr2 31610222 31610425 -219077429 + MIR SINE MIR 38 247 -15 232 277 0 46 chr2 31611076 31611141 -219076713 + MER5A DNA MER1_type 26 87 -102 * 311 206 0 41 chr2 31611088 31611161 -219076693 - MER5A DNA MER1_type -24 165 96 453 325 31 37 chr2 31611818 31612141 -219075713 + HAL1 LINE L1 606 926 -1581 266 284 35 28 chr2 31612247 31612388 -219075466 + HAL1 LINE L1 1405 1546 -961 1769 205 96 17 chr2 31612394 31612813 -219075041 + LTR40b LTR ERVL 11 462 0 1119 274 114 33 chr2 31612814 31613610 -219074244 + HAL1 LINE L1 1543 2403 -104 338 297 69 47 chr2 31613964 31614196 -219073658 + MIR SINE MIR 20 256 -6 240 277 0 0 chr2 31615757 31615804 -219072050 + L2 LINE L2 3215 3261 -11 481 322 60 6 chr2 31615876 31616059 -219071795 + MIR SINE MIR 60 252 -10 595 291 50 59 chr2 31616263 31616524 -219071330 + MIR SINE MIR 7 257 -5 1666 162 84 29 chr2 31617880 31618226 -219069628 + MLT1A1 LTR MaLR 1 365 0 536 314 28 8 chr2 31618305 31618557 -219069297 - MIR SINE MIR -4 258 2 214 253 67 40 chr2 31620415 31620490 -219067364 - L2 LINE L2 -2 3311 3235 370 284 53 49 chr2 31620929 31621154 -219066700 + L1MEd LINE L1 502 727 -5392 321 265 20 10 chr2 31621317 31621419 -219066435 + (CATATA)n Simple_repeat Simple_repeat 3 105 0 197 206 0 32 chr2 31621433 31621496 -219066358 + (TATATG)n Simple_repeat Simple_repeat 6 66 0 336 285 32 49 chr2 31621500 31621623 -219066231 + L1MC4 LINE L1 6588 6708 -1334 1521 251 165 35 chr2 31623181 31623702 -219064152 + MLT1E LTR MaLR 1 589 -4 181 291 36 0 chr2 31623973 31624028 -219063826 + MER5A DNA MER1_type 69 125 -64 43598 34 22 1 chr2 31624095 31630120 -219057734 + L1PA2 LINE L1 2 6155 0 437 284 81 7 chr2 31630131 31630279 -219057575 - MIR3 SINE MIR -48 160 2 414 308 24 1 chr2 31631507 31631651 -219056203 - MIR SINE MIR -56 152 36 381 228 67 34 chr2 31633660 31633809 -219054045 + L1MC5 LINE L1 7772 7925 -36 189 0 0 0 chr2 31633954 31633975 -219053879 + (CTG)n Simple_repeat Simple_repeat 2 22 0 842 229 84 0 chr2 31633975 31634154 -219053700 - MIR SINE MIR 0 262 69 710 281 94 0 chr2 31634572 31634764 -219053090 - MER115 DNA AcHobo -333 360 151 5318 62 8 5 chr2 31635643 31636307 -219051547 + PABL_B LTR ERV1 1 666 -1 2244 113 0 0 chr2 31636693 31637002 -219050852 + AluSg SINE Alu 1 309 -1 784 228 31 5 chr2 31637112 31637305 -219050549 + MER20 DNA MER1_type 21 218 -1 311 281 211 4 chr2 31637533 31637704 -219050150 - MIR SINE MIR -35 227 13 603 310 90 0 chr2 31638159 31638359 -219049495 + MIR SINE MIR 28 245 -17 272 213 33 49 chr2 31638520 31638703 -219049151 + (CAGG)n Simple_repeat Simple_repeat 1 180 0 226 313 49 6 chr2 31638644 31638807 -219049047 + (GGGTG)n Simple_repeat Simple_repeat 1 170 0 * 223 267 85 115 chr2 31640053 31640218 -219047636 + MIR SINE MIR 20 179 -83 318 87 0 0 chr2 31640527 31640573 -219047281 + (CA)n Simple_repeat Simple_repeat 2 47 0 823 198 35 70 chr2 31641636 31641863 -219045991 + MER20 DNA MER1_type 1 219 0 211 343 79 30 chr2 31642321 31642586 -219045268 + L2 LINE L2 2807 3084 -188 2388 87 0 3 chr2 31642953 31643251 -219044603 - AluSq SINE Alu -7 306 10 304 261 29 0 chr2 31645169 31645238 -219042616 - L2 LINE L2 0 3313 3243 298 353 78 12 chr2 31645600 31645844 -219042010 - L2 LINE L2 -498 2816 2557 185 346 12 0 chr2 31646019 31646100 -219041754 + L2 LINE L2 3189 3270 -43 801 332 89 9 chr2 31646167 31646625 -219041229 - L2 LINE L2 -810 2504 2010 216 260 73 0 chr2 31646900 31646996 -219040858 - L2 LINE L2 -1604 1710 1608 571 246 11 29 chr2 31647026 31647201 -219040653 + MER5B DNA MER1_type 3 174 -4 269 266 23 11 chr2 31647216 31647357 -219040497 + MER5A DNA MER1_type 4 189 0 354 279 91 36 chr2 31648312 31648477 -219039377 + MIR SINE MIR 32 205 -57 32 0 0 0 chr2 31648488 31648520 -219039334 + AT_rich Low_complexity Low_complexity 1 32 0 2361 87 0 0 chr2 31648524 31648811 -219039043 - AluSg SINE Alu -23 287 1 1991 122 36 41 chr2 31649605 31649967 -219037887 - MER46B DNA MER2_type 0 236 2 193 208 94 0 chr2 31652235 31652288 -219035566 + MIR SINE MIR 118 175 -87 432 313 85 11 chr2 31652382 31652558 -219035296 + L3 LINE CR1 1207 1395 -182 721 244 41 0 chr2 31652997 31653169 -219034685 - MER97a DNA MER1_type? -715 179 1 203 346 56 0 chr2 31653666 31653773 -219034081 + MIR SINE MIR 77 189 -73 187 227 91 45 chr2 31657157 31657223 -219030631 - MIR SINE MIR -50 212 144 1976 197 87 20 chr2 31657256 31657748 -219030106 - MLT1E2 LTR MaLR -99 527 3 279 264 110 0 chr2 31657758 31657849 -219030005 - MIR SINE MIR -116 146 46 257 50 0 25 chr2 31658186 31658226 -219029628 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 0 0 0 chr2 31658256 31658282 -219029572 + (CA)n Simple_repeat Simple_repeat 2 27 0 216 0 0 0 chr2 31658281 31658305 -219029549 + (TC)n Simple_repeat Simple_repeat 2 25 0 * 395 363 77 37 chr2 31660241 31660514 -219027340 + L3 LINE CR1 1238 1521 -56 470 244 17 8 chr2 31661139 31661258 -219026596 - L2 LINE L2 -5 3308 3189 1824 154 46 44 chr2 31662712 31663101 -219024753 + MLT1B LTR MaLR 1 390 0 209 238 48 67 chr2 31663274 31663379 -219024475 - MIR SINE MIR -88 120 18 300 326 86 23 chr2 31665799 31665974 -219021880 + MIR3 SINE MIR 20 205 -3 2979 99 0 14 chr2 31666149 31666583 -219021271 + MSTA LTR MaLR 1 428 0 373 326 182 24 chr2 31666684 31667267 -219020587 + L2 LINE L2 2185 2859 -455 2576 172 65 19 chr2 31668183 31668705 -219019149 + MER77 LTR ERV1 54 599 -6 181 293 147 0 chr2 31669626 31669701 -219018153 - L2 LINE L2 -10 3262 3177 288 286 44 30 chr2 31669821 31669976 -219017878 + MIR3 SINE MIR 7 146 -62 2239 180 19 90 chr2 31670891 31671525 -219016329 + L1MB5 LINE L1 5572 6160 -14 235 177 32 0 chr2 31671526 31671588 -219016266 + (CA)n Simple_repeat Simple_repeat 2 65 0 492 215 96 60 chr2 31672004 31672172 -219015682 + L1ME4a LINE L1 5851 6032 -89 4245 12 0 0 chr2 31672172 31672670 -219015184 + L1PA2 LINE L1 5658 6155 0 492 215 96 60 chr2 31672670 31672752 -219015102 + L1ME4a LINE L1 6032 6110 -11 2340 109 0 6 chr2 31673193 31673504 -219014350 - AluSc SINE Alu 0 309 1 720 151 0 0 chr2 31674247 31674366 -219013488 - AluSp/q SINE Alu -3 310 192 22 35 0 0 chr2 31674914 31674943 -219012911 + AT_rich Low_complexity Low_complexity 1 29 0 227 286 143 0 chr2 31675313 31675390 -219012464 + MIR SINE MIR 59 146 -116 23 0 0 0 chr2 31676227 31676250 -219011604 + AT_rich Low_complexity Low_complexity 1 23 0 971 101 0 20 chr2 31676251 31676400 -219011454 - L1MA2 LINE L1 -1 6303 6158 2121 138 7 0 chr2 31676403 31676700 -219011154 - AluSx SINE Alu -10 302 4 833 211 94 19 chr2 31677090 31677303 -219010551 - MIR SINE MIR -32 230 2 209 342 159 14 chr2 31678528 31678823 -219009031 + L2 LINE L2 2394 2731 -583 187 300 33 56 chr2 31679040 31679130 -219008724 + L2 LINE L2 3009 3096 -176 192 312 43 21 chr2 31679227 31679320 -219008534 + L2 LINE L2 3210 3304 -9 * 236 250 0 0 chr2 31679295 31679343 -219008511 - L2 LINE L2 -4 3309 3262 537 295 31 26 chr2 31679385 31679578 -219008276 + MIR SINE MIR 69 262 0 207 272 6 139 chr2 31680993 31681166 -219006688 + MIR SINE MIR 63 212 -50 305 254 18 79 chr2 31681265 31681379 -219006475 + MIR SINE MIR 30 136 -126 187 218 0 55 chr2 31681391 31681446 -219006408 + L2 LINE L2 3219 3270 -2 849 211 0 57 chr2 31681477 31681577 -219006277 + MER5A DNA MER1_type 7 92 -97 2207 112 0 35 chr2 31681577 31681889 -219005965 - AluSq SINE Alu -12 301 1 849 211 0 57 chr2 31681889 31681982 -219005872 + MER5A DNA MER1_type 92 189 0 739 263 69 5 chr2 31682046 31682263 -219005591 - MIR SINE MIR -24 238 8 357 214 20 31 chr2 31683586 31683684 -219004170 - MIR SINE MIR -146 116 20 456 274 82 0 chr2 31683709 31683844 -219004010 - MIR SINE MIR -14 248 103 292 298 50 16 chr2 31685071 31685192 -219002662 + MIR SINE MIR 20 144 -118 497 253 106 0 chr2 31685826 31685996 -219001858 + MIR SINE MIR 50 237 -25 282 234 97 14 chr2 31687981 31688120 -218999734 + MIR SINE MIR 18 166 -57 5520 68 12 0 chr2 31688400 31689138 -218998716 + L1PA6 LINE L1 5332 6078 -76 553 299 92 0 chr2 31689698 31689882 -218997972 - MIR SINE MIR -10 252 52 2042 292 63 30 chr2 31689909 31690401 -218997453 + L1MEc LINE L1 37 511 -5885 2105 153 0 0 chr2 31690401 31690708 -218997146 - AluSx SINE Alu -5 307 1 2042 292 63 30 chr2 31690708 31691188 -218996666 + L1MEc LINE L1 511 1041 -5355 22 0 0 0 chr2 31691491 31691513 -218996341 + AT_rich Low_complexity Low_complexity 1 22 0 390 357 13 6 chr2 31691716 31691873 -218995981 + MER5A DNA MER1_type 32 189 0 201 310 14 0 chr2 31692346 31692417 -218995437 + L2 LINE L2 3191 3262 -10 353 300 179 32 chr2 31692845 31693158 -218994696 + L2 LINE L2 2905 3263 -9 655 135 8 45 chr2 31693627 31693760 -218994094 + MER39B LTR ERV1 526 653 0 261 151 0 0 chr2 31694857 31694910 -218992944 + (CCG)n Simple_repeat Simple_repeat 1 53 0 623 222 18 23 chr2 31695649 31695820 -218992034 + MER58B DNA MER1_type 172 341 0 191 254 91 0 chr2 31697150 31697205 -218990649 - MIR3 SINE MIR -8 200 141 189 125 107 54 chr2 31697861 31697917 -218989937 + L2 LINE L2 2995 3053 -260 186 43 0 0 chr2 31698143 31698166 -218989688 + (A)n Simple_repeat Simple_repeat 1 23 0 757 213 53 32 chr2 31698167 31698438 -218989416 + L1MB7 LINE L1 5573 5854 -330 1738 201 76 18 chr2 31698872 31699337 -218988517 - MLT1D LTR MaLR 0 505 1 226 294 59 12 chr2 31699339 31699424 -218988430 - MIR SINE MIR -84 178 90 521 317 140 28 chr2 31699470 31699864 -218987990 - L2 LINE L2 -16 3297 2860 509 281 92 50 chr2 31699862 31700100 -218987754 + L2 LINE L2 3022 3269 -3 * 351 283 40 0 chr2 31701318 31701417 -218986437 + MIR SINE MIR 30 132 -76 438 275 93 3 chr2 31701428 31701595 -218986259 + MIR SINE MIR 39 217 -45 501 260 122 83 chr2 31701886 31702401 -218985453 + LTR67 LTR ERVL 2 536 -21 2438 79 0 0 chr2 31702408 31702698 -218985156 - AluSg SINE Alu -20 290 1 266 200 0 0 chr2 31702729 31702779 -218985075 + MIR SINE MIR 96 145 -117 250 295 0 0 chr2 31703209 31703270 -218984584 + L2 LINE L2 3245 3305 -8 837 253 45 9 chr2 31703420 31703641 -218984213 - MIR SINE MIR 0 262 34 252 304 134 0 chr2 31704605 31704717 -218983137 + MIR3 SINE MIR 77 203 -5 1768 108 0 24 chr2 31705409 31705658 -218982196 + AluSg SINE Alu 1 243 -67 367 286 40 32 chr2 31707268 31707394 -218980460 + MIR SINE MIR 20 146 -116 23 0 0 0 chr2 31707592 31707615 -218980239 + GC_rich Low_complexity Low_complexity 1 23 0 1197 154 67 5 chr2 31709623 31709654 -218978200 + AluJo SINE Alu 87 115 -197 180 0 0 0 chr2 31709654 31709674 -218978180 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1197 154 67 5 chr2 31709674 31709850 -218978004 + AluJo SINE Alu 115 307 -5 2333 94 3 7 chr2 31711585 31711893 -218975961 + AluSq SINE Alu 7 313 0 502 259 15 0 chr2 31712284 31712415 -218975439 - MER94 DNA DNA -1 133 1 257 210 0 32 chr2 31712806 31712868 -218974986 - Charlie8 DNA MER1_type -1012 1405 1346 418 292 55 64 chr2 31712970 31713189 -218974665 - Charlie8 DNA MER1_type -2199 218 2 304 305 39 39 chr2 31713500 31713628 -218974226 - MIR3 SINE MIR -28 180 53 254 271 0 0 chr2 31715286 31715356 -218972498 + (TA)n Simple_repeat Simple_repeat 2 71 0 191 341 12 12 chr2 31715584 31715666 -218972188 + MER5B DNA MER1_type 1 82 -96 538 275 45 99 chr2 31716098 31716411 -218971443 - L1MC4 LINE L1 -2 8040 7745 357 335 41 41 chr2 31716772 31716966 -218970888 + MIR3 SINE MIR 10 203 -5 21 0 0 0 chr2 31717568 31717589 -218970265 + AT_rich Low_complexity Low_complexity 1 21 0 840 252 172 17 chr2 31718184 31718486 -218969368 + L2 LINE L2 2965 3313 0 258 32 0 0 chr2 31718486 31718517 -218969337 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 180 97 0 0 chr2 31718560 31718591 -218969263 + (A)n Simple_repeat Simple_repeat 1 31 0 2521 87 0 0 chr2 31720768 31721077 -218966777 - AluSp SINE Alu -4 309 1 385 262 40 24 chr2 31721718 31721844 -218966010 - L2 LINE L2 0 3313 3186 355 315 93 82 chr2 31722012 31722395 -218965459 - L2 LINE L2 -261 3052 2675 2463 68 3 0 chr2 31722395 31722689 -218965165 - AluY SINE Alu -16 295 1 355 315 93 82 chr2 31722689 31722859 -218964995 - L2 LINE L2 -638 2675 2508 249 284 39 63 chr2 31722968 31723095 -218964759 - L2 LINE L2 -222 3050 2927 404 356 17 17 chr2 31723340 31723517 -218964337 + MER5A DNA MER1_type 8 184 -5 1649 203 0 7 chr2 31723619 31723948 -218963906 - AluJo SINE Alu 0 327 1 230 301 41 0 chr2 31723957 31724030 -218963824 - MIR SINE MIR -108 154 79 270 303 0 87 chr2 31726700 31726813 -218961041 - MER5A DNA MER1_type -5 184 72 245 353 33 1 chr2 31728885 31728980 -218958874 + MIR SINE MIR 17 110 -102 939 203 45 31 chr2 31728980 31729317 -218958537 + Charlie1a DNA MER1_type 2 379 -1076 883 211 108 76 chr2 31729324 31729694 -218958160 + LTR41 LTR ERVL 381 762 -11 187 331 169 0 chr2 31730498 31730628 -218957226 + L2 LINE L2 2926 3077 -195 358 271 15 5 chr2 31730847 31730950 -218956904 - MIR SINE MIR -64 144 42 344 311 73 32 chr2 31732132 31732351 -218955503 - MIR SINE MIR 0 262 35 423 68 0 0 chr2 31732489 31732548 -218955306 + (CA)n Simple_repeat Simple_repeat 2 60 0 281 290 76 130 chr2 31736780 31737042 -218950812 + L2 LINE L2 2978 3225 -47 309 299 31 24 chr2 31737740 31737867 -218949987 - MIR SINE MIR -119 143 16 299 143 0 14 chr2 31738106 31738176 -218949678 + (TC)n Simple_repeat Simple_repeat 2 70 0 228 86 0 0 chr2 31739377 31739412 -218948442 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 297 240 223 23 chr2 31739616 31739791 -218948063 - MIR SINE MIR -6 256 47 260 258 22 45 chr2 31741651 31741740 -218946114 + MIR SINE MIR 65 151 -111 198 344 100 11 chr2 31742202 31742292 -218945562 + L2 LINE L2 3124 3221 -51 418 332 84 20 chr2 31742747 31742943 -218944911 - MIR SINE MIR -49 213 5 432 307 134 39 chr2 31743178 31743484 -218944370 + L2 LINE L2 2935 3269 -3 277 237 301 0 chr2 31744181 31744274 -218943580 - MIR SINE MIR -71 191 71 1089 173 112 9 chr2 31745848 31746062 -218941792 - MER46A DNA MER2_type 0 236 1 575 273 35 10 chr2 31747627 31747825 -218940029 - MIR3 SINE MIR -3 205 3 302 269 64 43 chr2 31748402 31748543 -218939311 + MLT1H LTR MaLR 125 268 -281 215 208 0 21 chr2 31748729 31748777 -218939077 + L2 LINE L2 3212 3258 -14 248 75 0 25 chr2 31748777 31748817 -218939037 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 183 246 215 0 chr2 31749833 31749898 -218937956 + MIR SINE MIR 114 192 -70 550 355 9 4 chr2 31751400 31751631 -218936223 - MIR SINE MIR -16 246 15 220 275 38 25 chr2 31752012 31752092 -218935762 - L3 LINE CR1 -1 1576 1496 947 67 20 13 chr2 31752098 31752248 -218935606 + (TTTC)n Simple_repeat Simple_repeat 2 152 0 5139 30 0 3 chr2 31752250 31752845 -218935009 - L1PA3 LINE L1 0 6155 5563 12626 30 0 0 chr2 31752845 31754486 -218933368 + L1PA3 LINE L1 3920 5560 -595 312 222 0 0 chr2 31754487 31754559 -218933295 + CT-rich Low_complexity Low_complexity 1 72 0 401 216 123 53 chr2 31755287 31755458 -218932396 + MIR SINE MIR 80 262 0 435 209 24 46 chr2 31755845 31755976 -218931878 + MIR SINE MIR 18 161 -62 1256 195 105 76 chr2 31755982 31756429 -218931425 + MLT1C LTR MaLR 6 465 -2 725 91 0 10 chr2 31756434 31756533 -218931321 + MER4A LTR ERV1 1 98 -566 1996 111 11 25 chr2 31756533 31756883 -218930971 + MER4A LTR ERV1 261 664 0 331 263 21 0 chr2 31756883 31756978 -218930876 + MIR SINE MIR 157 253 -9 2249 112 0 3 chr2 31758403 31758707 -218929147 - AluSq SINE Alu -10 303 1 1448 192 46 23 chr2 31759069 31759460 -218928394 - MER54B LTR ERVL -5 788 487 297 191 16 0 chr2 31759472 31759535 -218928319 + MER4-int LTR ERV1 1099 1162 -5436 654 178 0 0 chr2 31759543 31759672 -218928182 + (TG)n Simple_repeat Simple_repeat 1 129 0 4702 180 31 15 chr2 31762698 31763546 -218924308 + MER21B LTR ERV1 1 861 -2 1138 99 0 0 chr2 31764424 31764575 -218923279 - AluSg/x SINE Alu -1 309 159 594 192 11 73 chr2 31764615 31764792 -218923062 + GSAT Satellite centromeric 3 168 -49 1298 92 0 12 chr2 31764793 31764957 -218922897 - AluSq SINE Alu -151 162 1 225 229 71 29 chr2 31765041 31765111 -218922743 + MLT1L LTR MaLR 1 73 -542 304 280 144 8 chr2 31765250 31765368 -218922486 - L2 LINE L2 -1 3271 3138 193 364 11 0 chr2 31765363 31765451 -218922403 - MIR SINE MIR -86 122 34 * 569 242 119 45 chr2 31765748 31765888 -218921966 - MER5C DNA MER1_type -2 322 194 1728 176 10 3 chr2 31765888 31766177 -218921677 + AluJb SINE Alu 1 291 -21 569 242 119 45 chr2 31766177 31766305 -218921549 - MER5C DNA MER1_type -130 194 34 1059 171 18 0 chr2 31767378 31767548 -218920306 - AluJo SINE Alu -20 292 120 640 232 11 76 chr2 31767980 31768165 -218919689 - MER63A DNA MER1_type -37 173 1 2369 55 0 17 chr2 31768394 31768724 -218919130 + AluY SINE Alu 1 325 0 342 230 0 23 chr2 31768846 31768933 -218918921 - L1ME4a LINE L1 -53 6068 5984 442 338 48 13 chr2 31769234 31769462 -218918392 + L1 LINE L1 3962 4197 -1949 328 344 28 36 chr2 31769486 31769733 -218918121 + L1 LINE L1 4153 4397 -1749 261 0 0 0 chr2 31769904 31769933 -218917921 + (CA)n Simple_repeat Simple_repeat 1 29 0 301 312 71 7 chr2 31769933 31770074 -218917780 + L1ME4a LINE L1 5972 6121 0 605 195 76 100 chr2 31770102 31770268 -218917586 + L1ME1 LINE L1 5955 6117 -49 2073 130 33 0 chr2 31770268 31770569 -218917285 + AluSx SINE Alu 1 311 -1 605 195 76 100 chr2 31770569 31770612 -218917242 + L1ME1 LINE L1 6117 6159 -7 276 167 61 30 chr2 31770929 31770995 -218916859 - L2 LINE L2 -1 3271 3204 226 270 32 0 chr2 31771706 31771769 -218916085 - MIR SINE MIR -108 154 90 3650 149 220 7 chr2 31771954 31772667 -218915187 - L1M1 LINE L1 -5287 2278 1414 1856 99 4 0 chr2 31772667 31772900 -218914954 - AluSc SINE Alu -75 234 1 758 70 130 17 chr2 31772901 31773016 -218914838 - AluSg SINE Alu -181 129 2 27 0 0 0 chr2 31774292 31774319 -218913535 + AT_rich Low_complexity Low_complexity 1 27 0 190 194 28 0 chr2 31774514 31774550 -218913304 - L2 LINE L2 -18 3254 3218 2205 130 0 3 chr2 31774686 31774993 -218912861 + AluSx SINE Alu 1 306 -6 2229 184 154 28 chr2 31774995 31775540 -218912314 + MER90 LTR ERV1 1 614 0 742 164 9 0 chr2 31775865 31775981 -218911873 + FLAM_C SINE Alu 2 118 -25 818 174 0 0 chr2 31776160 31776292 -218911562 + AluSq/x SINE Alu 1 132 -181 4943 139 46 27 chr2 31776861 31777150 -218910704 + MER4D LTR ERV1 2 284 -619 2435 81 0 3 chr2 31777150 31777459 -218910395 + AluY SINE Alu 1 308 -3 4943 139 46 27 chr2 31777459 31778053 -218909801 + MER4D LTR ERV1 284 902 -1 998 230 0 5 chr2 31778645 31778849 -218909005 + AluJo SINE Alu 84 286 -26 2257 110 0 7 chr2 31779125 31779424 -218908430 + AluSx SINE Alu 1 297 -15 2392 81 0 10 chr2 31779634 31779941 -218907913 + AluY SINE Alu 1 304 -7 2067 136 0 10 chr2 31780257 31780565 -218907289 - AluSx SINE Alu -7 305 1 1125 116 12 6 chr2 31780584 31780748 -218907106 - AluSq SINE Alu -15 298 134 2264 107 0 7 chr2 31780869 31781167 -218906687 + AluSx SINE Alu 1 296 -16 2710 45 0 0 chr2 31781216 31781526 -218906328 + AluY SINE Alu 2 311 0 256 188 0 0 chr2 31781684 31781732 -218906122 + FLAM_A SINE Alu 84 131 -2 527 171 29 48 chr2 31781732 31781837 -218906017 + AluJo/FRAM SINE Alu 189 291 -21 24 32 0 0 chr2 31781837 31781868 -218905986 + AT_rich Low_complexity Low_complexity 1 31 0 2296 112 0 0 chr2 31782131 31782435 -218905419 + AluSx SINE Alu 1 304 -8 2024 137 10 13 chr2 31782489 31782802 -218905052 - AluJo SINE Alu 0 312 1 2180 98 3 0 chr2 31782815 31783101 -218904753 - AluSg SINE Alu -20 290 4 806 173 0 23 chr2 31783107 31783240 -218904614 - FLAM_C SINE Alu -3 130 1 2234 103 7 3 chr2 31783450 31783752 -218904102 - AluSg SINE Alu -7 303 1 1504 270 57 29 chr2 31784041 31784575 -218903279 - MLT1H LTR MaLR 0 593 1 2101 127 0 13 chr2 31784693 31784993 -218902861 + AluSx SINE Alu 1 296 -16 1588 174 3 48 chr2 31785160 31785454 -218902400 - AluJb SINE Alu -31 281 1 633 186 110 0 chr2 31786097 31786215 -218901639 + FLAM_A SINE Alu 3 133 0 26 30 0 0 chr2 31786608 31786641 -218901213 + AT_rich Low_complexity Low_complexity 1 33 0 564 198 11 126 chr2 31787055 31787133 -218900721 - Charlie8 DNA MER1_type -2152 265 218 1874 164 7 3 chr2 31787133 31787431 -218900423 - AluJb SINE Alu -13 299 1 564 198 11 126 chr2 31787431 31787534 -218900320 - Charlie8 DNA MER1_type -2199 218 105 669 191 0 0 chr2 31787564 31787690 -218900164 - FRAM SINE Alu -10 166 41 1960 142 0 14 chr2 31787706 31787892 -218899962 - AluSx SINE Alu 0 319 137 2333 98 0 16 chr2 31787892 31788210 -218899644 - AluSq SINE Alu 0 313 1 1960 142 0 14 chr2 31788210 31788346 -218899508 - AluSx SINE Alu -182 137 1 965 196 0 6 chr2 31788354 31788559 -218899295 + AluSg/x SINE Alu 118 321 0 23 78 0 0 chr2 31788801 31788852 -218899002 + AT_rich Low_complexity Low_complexity 1 51 0 2474 73 3 0 chr2 31788884 31789184 -218898670 + AluSp SINE Alu 1 301 -12 1033 78 0 0 chr2 31789478 31789606 -218898248 + AluSc SINE Alu 168 295 -14 1610 180 0 48 chr2 31789609 31789904 -218897950 - AluJb SINE Alu -31 281 1 1829 182 132 25 chr2 31790067 31790139 -218897715 - MER68 LTR ERV1 -2 560 497 1642 128 0 0 chr2 31790139 31790365 -218897489 - AluSg/x SINE Alu -16 296 71 1829 182 132 25 chr2 31790365 31790693 -218897161 - MER68 LTR ERV1 -65 497 117 1724 172 0 0 chr2 31790699 31791011 -218896843 + AluJb SINE Alu 1 312 0 1920 101 4 8 chr2 31791060 31791318 -218896536 - AluSg SINE Alu -25 285 29 1145 54 0 0 chr2 31791338 31791468 -218896386 + AluYb8 SINE Alu 1 130 -188 2079 133 0 0 chr2 31791654 31791955 -218895899 - AluSx SINE Alu -11 301 1 1835 82 129 0 chr2 31792145 31792401 -218895453 - AluSc SINE Alu -20 289 1 1498 171 65 7 chr2 31792817 31793092 -218894762 - AluJb SINE Alu -21 291 1 1999 125 17 3 chr2 31793156 31793445 -218894409 - AluSx SINE Alu -19 293 1 2481 78 0 3 chr2 31793579 31793888 -218893966 + AluY SINE Alu 1 308 -3 1100 197 24 5 chr2 31794049 31794262 -218893592 - AluJo SINE Alu -10 302 86 22 56 0 0 chr2 31794421 31794457 -218893397 + AT_rich Low_complexity Low_complexity 1 36 0 443 194 163 10 chr2 31794459 31794557 -218893297 - AluY SINE Alu -198 113 1 * 693 147 199 0 chr2 31794557 31794692 -218893162 - AluJb SINE Alu -16 296 135 2166 84 3 78 chr2 31795042 31795176 -218892678 + AluSg SINE Alu 1 143 -167 2318 76 6 47 chr2 31795176 31795493 -218892361 + AluSc SINE Alu 2 305 -4 2166 84 3 78 chr2 31795493 31795679 -218892175 + AluSg SINE Alu 143 297 -13 2245 110 7 0 chr2 31797690 31797998 -218889856 + AluSx SINE Alu 2 311 -1 561 214 0 0 chr2 31798097 31798200 -218889654 + AluJb SINE Alu 180 282 -30 1790 79 162 26 chr2 31798237 31798502 -218889352 + AluSx SINE Alu 1 301 -1 337 253 24 0 chr2 31798543 31798626 -218889228 + MIR SINE MIR 38 122 -140 21 0 0 0 chr2 31798669 31798690 -218889164 + AT_rich Low_complexity Low_complexity 1 21 0 2292 93 17 0 chr2 31798785 31799076 -218888778 + AluSx SINE Alu 1 296 -16 1301 159 49 9 chr2 31799101 31799327 -218888527 + AluJb SINE Alu 60 294 -18 1221 257 110 39 chr2 31799336 31799751 -218888103 - L1MEc LINE L1 -4544 1852 1468 1490 77 0 10 chr2 31799751 31799946 -218887908 - AluY SINE Alu -13 298 106 2473 60 7 3 chr2 31799947 31800247 -218887607 - AluY SINE Alu -10 301 1 1221 257 110 39 chr2 31800247 31800346 -218887508 - L1MEc LINE L1 -4927 1469 1299 1560 167 35 7 chr2 31800370 31800652 -218887202 + AluJb SINE Alu 12 301 -11 2036 143 3 13 chr2 31800669 31800984 -218886870 - AluSx SINE Alu 0 312 1 2015 99 46 11 chr2 31801031 31801313 -218886541 - AluSc SINE Alu -16 293 2 1092 164 17 59 chr2 31801321 31801559 -218886295 - AluJo SINE Alu 0 312 85 469 70 0 0 chr2 31801559 31801616 -218886238 - AluSg/x SINE Alu -62 250 194 2139 121 13 0 chr2 31801620 31801918 -218885936 - AluSq SINE Alu -10 303 2 1117 253 57 64 chr2 31801920 31802003 -218885851 - L1MEc LINE L1 -5825 571 489 2719 143 34 2 chr2 31802003 31802416 -218885438 + MSTB LTR MaLR 1 426 0 1117 253 57 64 chr2 31802416 31802771 -218885083 - L1MEc LINE L1 -5907 489 136 2203 100 7 0 chr2 31802946 31803245 -218884609 - AluSp SINE Alu -12 301 1 2193 105 10 0 chr2 31803312 31803607 -218884247 - AluSx SINE Alu -14 298 1 23 42 0 21 chr2 31803607 31803633 -218884221 + AT_rich Low_complexity Low_complexity 1 27 -20 2233 101 0 0 chr2 31803633 31803920 -218883934 - AluSg SINE Alu -23 287 1 23 42 0 21 chr2 31803920 31803941 -218883913 + AT_rich Low_complexity Low_complexity 27 47 0 824 161 0 0 chr2 31803945 31804057 -218883797 - FLAM_C SINE Alu -30 113 2 974 183 0 27 chr2 31804697 31804715 -218883139 - AluSg/x SINE Alu 0 312 295 2384 101 0 0 chr2 31804715 31805023 -218882831 - AluSg SINE Alu -2 308 1 974 183 0 27 chr2 31805023 31805190 -218882664 - AluSg/x SINE Alu -17 295 132 2121 118 16 0 chr2 31805190 31805495 -218882359 - AluSg SINE Alu 0 310 1 1160 181 9 19 chr2 31805821 31805986 -218881868 - AluJb SINE Alu -14 298 134 2440 70 0 0 chr2 31805986 31806286 -218881568 - AluY SINE Alu -11 300 1 1160 181 9 19 chr2 31806286 31806336 -218881518 - AluJb SINE Alu -178 134 85 604 221 7 0 chr2 31806358 31806498 -218881356 + MER113 DNA MER1_type? 158 298 -223 22 0 0 0 chr2 31806548 31806570 -218881284 + AT_rich Low_complexity Low_complexity 1 22 0 2047 130 3 0 chr2 31807342 31807645 -218880209 - AluSx SINE Alu 0 304 1 1351 124 0 5 chr2 31807656 31807850 -218880004 - AluSg/x SINE Alu -15 295 103 1936 106 38 0 chr2 31807850 31808114 -218879740 - AluSc SINE Alu -35 274 1 1036 139 6 35 chr2 31808354 31808527 -218879327 + FRAM SINE Alu 1 167 -9 2462 65 0 13 chr2 31808707 31809014 -218878840 + AluY SINE Alu 1 303 -8 1139 139 0 0 chr2 31809022 31809187 -218878667 + AluJb SINE Alu 142 306 -6 21 36 0 0 chr2 31809219 31809247 -218878607 + AT_rich Low_complexity Low_complexity 1 28 0 745 177 0 82 chr2 31809247 31809394 -218878460 + AluJo SINE Alu 3 137 -175 36 23 0 0 chr2 31809394 31809437 -218878417 + AT_rich Low_complexity Low_complexity 1 43 0 279 295 116 0 chr2 31809495 31809590 -218878264 - MIR SINE MIR -151 111 6 517 245 36 0 chr2 31809682 31809821 -218878033 + L1ME3A LINE L1 5727 5870 -300 809 164 17 0 chr2 31809833 31809949 -218877905 + AluJb SINE Alu 1 118 -194 26 30 0 0 chr2 31809954 31809987 -218877867 + AT_rich Low_complexity Low_complexity 1 33 0 2412 75 3 0 chr2 31810315 31810608 -218877246 - AluSp SINE Alu -19 294 1 1759 142 10 35 chr2 31810646 31810956 -218876898 - AluSx SINE Alu -10 302 1 970 117 0 7 chr2 31811101 31811238 -218876616 + AluJo SINE Alu 6 141 -171 1924 132 3 26 chr2 31811238 31811541 -218876313 + AluJb SINE Alu 5 300 -12 232 218 13 13 chr2 31811715 31811793 -218876061 + GA-rich Low_complexity Low_complexity 1 78 0 1243 92 0 6 chr2 31812328 31812501 -218875353 - AluSg/x SINE Alu -10 302 131 27 49 0 0 chr2 31813221 31813262 -218874592 + GC_rich Low_complexity Low_complexity 1 41 0 2293 85 0 0 chr2 31814325 31814619 -218873235 - AluSg SINE Alu -16 294 1 195 215 92 0 chr2 31814622 31814687 -218873167 - MIR SINE MIR -6 256 186 393 200 11 22 chr2 31814729 31814819 -218873035 - MIR SINE MIR -71 191 103 2041 131 3 3 chr2 31815272 31815570 -218872284 - AluSx SINE Alu -10 302 5 815 222 0 0 chr2 31815688 31815859 -218871995 + AluSc SINE Alu 1 171 -138 271 195 0 0 chr2 31816311 31816352 -218871502 - Alu SINE Alu -260 41 1 346 263 86 59 chr2 31816416 31816448 -218871406 + MIR3 SINE MIR 34 64 -144 2206 108 0 3 chr2 31816448 31816744 -218871110 - AluSx SINE Alu -17 295 1 346 263 86 59 chr2 31816744 31816863 -218870991 + MIR3 SINE MIR 64 189 -19 270 0 0 0 chr2 31816867 31816897 -218870957 + (TG)n Simple_repeat Simple_repeat 1 30 0 2367 50 4 0 chr2 31816897 31817176 -218870678 - AluY SINE Alu -31 280 1 725 134 0 0 chr2 31817419 31817516 -218870338 + AluSq SINE Alu 2 98 -214 1495 133 5 0 chr2 31817636 31817854 -218870000 + AluSq SINE Alu 94 312 -1 541 255 80 14 chr2 31819255 31819467 -218868387 - HAL1b LINE L1 -750 598 373 4546 149 41 37 chr2 31819502 31821012 -218866842 - L1PA16 LINE L1 -104 6062 4544 1712 226 0 41 chr2 31821012 31821293 -218866561 + L1 LINE L1 4136 4394 -1752 2392 82 0 16 chr2 31821293 31821610 -218866244 + AluSx SINE Alu 1 312 0 1712 226 0 41 chr2 31821610 31821765 -218866089 + L1 LINE L1 4394 4554 -1592 1589 137 29 4 chr2 31822141 31822382 -218865472 + AluSx SINE Alu 54 300 -12 664 157 74 25 chr2 31822389 31822510 -218865344 + AluJb SINE Alu 2 128 -184 42 0 0 0 chr2 31822516 31822558 -218865296 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 31822691 31822714 -218865140 + AT_rich Low_complexity Low_complexity 1 23 0 260 150 0 0 chr2 31823738 31823778 -218864076 - L1M4 LINE L1 -1584 4562 4523 * 1922 234 50 27 chr2 31823775 31824154 -218863700 + L1ME1 LINE L1 5551 5951 -215 2020 93 62 7 chr2 31824154 31824443 -218863411 - AluSc SINE Alu -4 305 1 1922 234 50 27 chr2 31824443 31824661 -218863193 + L1ME1 LINE L1 5951 6162 -4 1946 146 7 10 chr2 31824733 31825034 -218862820 + AluJo SINE Alu 3 302 -10 23 68 0 0 chr2 31825195 31825239 -218862615 + AT_rich Low_complexity Low_complexity 1 44 0 242 139 18 2 chr2 31825457 31825623 -218862231 + AluJb SINE Alu 86 290 -12 37 23 0 0 chr2 31825705 31825749 -218862105 + AT_rich Low_complexity Low_complexity 1 44 0 1943 132 17 10 chr2 31826351 31826640 -218861214 + AluSp SINE Alu 1 291 -22 1975 135 3 20 chr2 31826841 31827144 -218860710 - AluJb SINE Alu -14 298 1 312 167 0 0 chr2 31827146 31827194 -218860660 - MER58 DNA MER1_type -133 82 35 1634 173 0 33 chr2 31828024 31828330 -218859524 + AluJo SINE Alu 1 296 -16 2280 84 44 0 chr2 31828332 31828628 -218859226 + AluSg SINE Alu 1 309 -1 216 0 0 0 chr2 31829093 31829117 -218858737 + (T)n Simple_repeat Simple_repeat 1 24 0 1637 131 25 0 chr2 31829126 31829363 -218858491 - AluSx SINE Alu -69 243 1 2388 57 0 0 chr2 31829365 31829677 -218858177 - AluY SINE Alu 0 312 1 1544 176 4 11 chr2 31829677 31829955 -218857899 - AluJb SINE Alu -11 301 26 1160 60 0 0 chr2 31830136 31830269 -218857585 + AluSq/x SINE Alu 1 133 -180 2139 113 0 10 chr2 31830274 31830583 -218857271 + AluSg SINE Alu 1 306 -4 857 302 82 36 chr2 31830621 31831053 -218856801 + HAL1 LINE L1 583 1040 -1467 2342 97 0 10 chr2 31831053 31831361 -218856493 + AluSx SINE Alu 1 305 -7 857 302 82 36 chr2 31831361 31831402 -218856452 + HAL1 LINE L1 1040 1078 -1429 2040 93 45 0 chr2 31831456 31831725 -218856129 + AluSq SINE Alu 1 281 -32 1423 252 76 44 chr2 31831779 31832512 -218855342 + HAL1 LINE L1 1372 2128 -379 557 168 88 18 chr2 31832770 31832883 -218854971 + FLAM_A SINE Alu 22 142 0 335 290 145 8 chr2 31834187 31834311 -218853543 + MIR3 SINE MIR 60 200 -8 277 237 26 61 chr2 31834560 31834674 -218853180 - MER113 DNA MER1_type? -406 115 6 1980 159 0 0 chr2 31835067 31835369 -218852485 + AluSq SINE Alu 2 303 -10 25 0 0 0 chr2 31835412 31835437 -218852417 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 31835588 31835612 -218852242 + AT_rich Low_complexity Low_complexity 1 24 0 2332 75 20 13 chr2 31835615 31835920 -218851934 - AluSc SINE Alu -2 307 1 1103 139 6 0 chr2 31835922 31836088 -218851766 - AluSg/x SINE Alu -20 290 124 1876 166 0 17 chr2 31836132 31836434 -218851420 + AluSx SINE Alu 1 297 -15 27 49 0 0 chr2 31837001 31837042 -218850812 + AT_rich Low_complexity Low_complexity 1 41 0 28 29 0 0 chr2 31837508 31837543 -218850311 + AT_rich Low_complexity Low_complexity 1 35 0 2363 59 39 0 chr2 31837655 31837941 -218849913 + AluSp SINE Alu 5 301 -12 26 50 0 0 chr2 31838342 31838382 -218849472 + AT_rich Low_complexity Low_complexity 1 40 0 1499 159 51 48 chr2 31838481 31838776 -218849078 - AluJo SINE Alu -16 296 1 1133 108 0 0 chr2 31838808 31838966 -218848888 + AluSc SINE Alu 152 309 0 2312 108 0 3 chr2 31839033 31839338 -218848516 + AluSx SINE Alu 2 305 -7 1383 141 173 0 chr2 31839514 31839763 -218848091 + AluJb SINE Alu 1 292 -20 2275 114 0 0 chr2 31840253 31840552 -218847302 + AluSg SINE Alu 1 299 -11 388 129 0 0 chr2 31840584 31840646 -218847208 + L1MA1 LINE L1 6059 6120 -182 1629 138 0 0 chr2 31840646 31840870 -218846984 + AluSx SINE Alu 1 224 -88 387 0 0 0 chr2 31840885 31840928 -218846926 + (CTA)n Simple_repeat Simple_repeat 1 43 0 40 37 0 0 chr2 31840930 31840984 -218846870 + AT_rich Low_complexity Low_complexity 1 54 0 227 229 92 28 chr2 31841125 31841234 -218846620 + L1ME LINE L1 1924 2039 -4501 2148 110 40 3 chr2 31841636 31841935 -218845919 - AluSg SINE Alu 0 310 1 314 319 104 22 chr2 31841935 31842070 -218845784 + MIR SINE MIR 117 262 0 303 308 26 17 chr2 31842075 31842192 -218845662 - L3 LINE CR1 -569 1008 891 280 311 88 28 chr2 31842758 31843112 -218844742 + L1ME LINE L1 4646 5020 -1520 27 29 0 0 chr2 31843378 31843412 -218844442 + AT_rich Low_complexity Low_complexity 1 34 0 419 215 143 53 chr2 31843448 31843657 -218844197 + L1ME LINE L1 5870 6097 -418 21 0 0 0 chr2 31844196 31844217 -218843637 + AT_rich Low_complexity Low_complexity 1 21 0 201 241 149 11 chr2 31845048 31845135 -218842719 + MIR SINE MIR 92 190 -72 310 263 24 124 chr2 31845632 31845841 -218842013 - MIR SINE MIR -13 249 62 546 176 0 11 chr2 31846416 31846507 -218841347 + 5S rRNA rRNA 1 90 -31 319 319 94 33 chr2 31846786 31846999 -218840855 - MIR SINE MIR 0 262 37 1594 127 0 13 chr2 31847584 31847813 -218840041 + AluSg/x SINE Alu 87 312 0 1223 282 75 38 chr2 31848052 31848131 -218839723 - L1ME3A LINE L1 -280 5890 5815 1169 124 0 5 chr2 31848131 31848317 -218839537 - L1PA14 LINE L1 -1 6160 5976 1223 282 75 38 chr2 31848317 31848846 -218839008 - L1ME3A LINE L1 -355 5815 5259 222 209 11 33 chr2 31849197 31849288 -218838566 + CT-rich Low_complexity Low_complexity 3 91 0 618 255 43 49 chr2 31849326 31849655 -218838199 - L1ME3A LINE L1 -1493 4653 4327 202 333 126 54 chr2 31850219 31850537 -218837317 + L2 LINE L2 2306 2650 -664 2088 160 11 11 chr2 31850537 31850912 -218836942 - THE1C LTR MaLR 0 375 1 202 333 126 54 chr2 31850912 31850926 -218836928 + L2 LINE L2 2650 2662 -652 614 194 125 6 chr2 31851031 31851191 -218836663 - MER97a DNA MER1_type? -715 179 1 223 255 20 0 chr2 31853215 31853266 -218834588 - MIR SINE MIR -55 153 102 367 348 12 12 chr2 31853593 31853754 -218834100 - MIR3 SINE MIR -1 207 47 512 259 40 59 chr2 31855301 31855503 -218832351 - L1ME4a LINE L1 -45 6076 5881 2165 137 0 3 chr2 31855503 31855810 -218832044 - AluSx SINE Alu -6 306 1 512 259 40 59 chr2 31855810 31855928 -218831926 - L1ME4a LINE L1 -240 5881 5762 435 209 43 122 chr2 31855932 31856162 -218831692 - L1ME4a LINE L1 -295 5826 5615 23 33 0 0 chr2 31856177 31856207 -218831647 + AT_rich Low_complexity Low_complexity 1 30 0 271 310 30 0 chr2 31857755 31857855 -218829999 + MIR SINE MIR 83 185 -77 268 311 33 33 chr2 31859437 31859527 -218828327 + MIR SINE MIR 8 97 -165 276 247 75 0 chr2 31859574 31859667 -218828187 - MIR SINE MIR -38 224 125 * 278 311 47 9 chr2 31859659 31859765 -218828089 + MIR SINE MIR 140 249 -13 2372 73 0 10 chr2 31860779 31861095 -218826759 + AluSq SINE Alu 1 313 0 1814 176 3 7 chr2 31861099 31861400 -218826454 + AluSx SINE Alu 1 300 -12 2287 85 11 0 chr2 31861525 31861858 -218825996 - AluSq SINE Alu 0 336 1 235 325 62 0 chr2 31862975 31863055 -218824799 + MIR SINE MIR 30 114 -94 412 275 194 5 chr2 31863286 31863497 -218824357 + MIR SINE MIR 7 257 -5 234 0 0 0 chr2 31863633 31863659 -218824195 + (TA)n Simple_repeat Simple_repeat 2 27 0 2360 83 0 58 chr2 31863659 31863985 -218823869 - AluSp SINE Alu -6 307 1 2212 113 0 0 chr2 31865005 31865288 -218822566 - AluSx SINE Alu -16 296 14 186 45 68 23 chr2 31865392 31865436 -218822418 + T-rich Low_complexity Low_complexity 2 47 0 26 50 0 0 chr2 31865447 31865487 -218822367 + AT_rich Low_complexity Low_complexity 1 40 0 193 216 20 0 chr2 31866405 31866456 -218821398 + L2 LINE L2 3000 3051 -221 270 203 0 34 chr2 31867795 31867854 -218820000 + MIR SINE MIR 117 173 -89 515 271 60 102 chr2 31868078 31868344 -218819510 + MIR SINE MIR 7 261 -1 2408 98 0 7 chr2 31868365 31868671 -218819183 - AluSc SINE Alu -5 304 1 189 254 68 0 chr2 31870260 31870319 -218817535 + MIR SINE MIR 120 182 -80 310 207 0 0 chr2 31870436 31870494 -218817360 - MER91B DNA MER1_type -127 63 6 1548 117 0 0 chr2 31870536 31870780 -218817074 - AluSc SINE Alu 0 309 98 217 239 15 15 chr2 31871254 31871321 -218816533 + (CA)n Simple_repeat Simple_repeat 2 68 0 306 0 0 0 chr2 31871351 31871385 -218816469 + (CA)n Simple_repeat Simple_repeat 1 34 0 298 352 16 16 chr2 31871556 31871684 -218816170 + MER91A DNA MER1_type 57 184 -12 196 203 43 43 chr2 31872181 31872250 -218815604 - MIR SINE MIR -117 145 77 466 268 21 20 chr2 31872837 31873013 -218814841 + MIR SINE MIR 19 192 -65 225 264 0 0 chr2 31873568 31873621 -218814233 - MIR SINE MIR -110 152 100 482 240 71 19 chr2 31874133 31874287 -218813567 - MIR3 SINE MIR -29 179 18 197 223 125 71 chr2 31874372 31874484 -218813370 - MIR SINE MIR -35 227 110 276 246 0 29 chr2 31874543 31874612 -218813242 - L2 LINE L2 -1 3312 3246 201 39 0 0 chr2 31875548 31875574 -218812280 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 308 254 112 52 chr2 31875616 31875750 -218812104 + MIR SINE MIR 61 202 -60 298 215 38 0 chr2 31876045 31876124 -218811730 + MIR3 SINE MIR 93 174 -34 746 296 9 26 chr2 31876624 31876857 -218810997 + MIR SINE MIR 13 241 -21 824 162 92 0 chr2 31876875 31877048 -218810806 + MER5A DNA MER1_type 1 189 0 273 239 15 0 chr2 31877386 31877453 -218810401 + MIR SINE MIR 68 135 -73 2200 103 3 3 chr2 31878023 31878315 -218809539 + AluSx SINE Alu 1 292 -20 413 294 128 37 chr2 31878316 31878534 -218809320 - MIR SINE MIR -5 257 20 424 271 148 48 chr2 31879171 31879381 -218808473 + MIR SINE MIR 26 256 -6 381 269 46 0 chr2 31880500 31880630 -218807224 + MIR SINE MIR 111 246 -16 2100 116 17 7 chr2 31880740 31881033 -218806821 + AluSx SINE Alu 1 296 -16 6296 138 62 16 chr2 31882143 31882638 -218805216 - Tigger3b DNA MER2_type -1797 1231 760 2349 70 17 17 chr2 31882638 31882937 -218804917 - AluSc SINE Alu -10 299 1 6296 138 62 16 chr2 31882937 31883618 -218804236 - Tigger3b DNA MER2_type -2268 760 1 199 211 19 19 chr2 31883619 31883671 -218804183 - MER5B DNA MER1_type -123 55 4 366 61 0 0 chr2 31884866 31884915 -218802939 + (CA)n Simple_repeat Simple_repeat 2 50 0 485 318 33 33 chr2 31885586 31885797 -218802057 - MIR SINE MIR -5 257 47 1112 210 106 112 chr2 31887461 31887966 -218799888 - LTR36 LTR ERV1 0 611 109 1915 121 7 59 chr2 31887966 31888271 -218799583 - AluSx SINE Alu -23 289 1 1112 210 106 112 chr2 31888271 31888380 -218799474 - LTR36 LTR ERV1 -502 109 1 459 299 124 41 chr2 31889265 31889629 -218798225 + MLT1I LTR MaLR 9 402 -7 2446 102 0 0 chr2 31889731 31890036 -218797818 + AluSg SINE Alu 1 305 -5 262 224 26 13 chr2 31890272 31890348 -218797506 + MLT1J LTR MaLR 95 171 -340 * 279 270 27 14 chr2 31890287 31890361 -218797493 + LTR67 LTR ERVL 115 189 -368 180 158 0 0 chr2 31890625 31890663 -218797191 + (TG)n Simple_repeat Simple_repeat 2 39 0 393 22 0 0 chr2 31892055 31892101 -218795753 + (CA)n Simple_repeat Simple_repeat 1 46 0 219 88 0 0 chr2 31892104 31892138 -218795716 + (TC)n Simple_repeat Simple_repeat 1 34 0 1495 201 39 24 chr2 31893190 31893528 -218794326 + LTR16A LTR ERVL 108 450 0 1293 169 24 4 chr2 31894966 31895214 -218792640 + L1MC1 LINE L1 6075 6327 -6 2202 115 0 3 chr2 31895214 31895509 -218792345 + AluSq SINE Alu 1 294 -19 28 29 0 0 chr2 31895509 31895544 -218792310 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr2 31895673 31895699 -218792155 + AT_rich Low_complexity Low_complexity 1 26 0 408 20 0 0 chr2 31896421 31896470 -218791384 + (TG)n Simple_repeat Simple_repeat 1 49 0 307 264 169 14 chr2 31896761 31896909 -218790945 + MIR SINE MIR 79 249 -13 268 170 0 0 chr2 31897728 31897775 -218790079 + FLAM_A SINE Alu 27 73 -59 * 607 224 9 0 chr2 31897773 31897889 -218789965 + AluJo/FRAM SINE Alu 162 278 -34 219 69 0 0 chr2 31897921 31897950 -218789904 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 638 224 68 96 chr2 31898365 31898615 -218789239 - MIR SINE MIR 0 262 20 1935 70 8 8 chr2 31898748 31899007 -218788847 - AluSp SINE Alu -1 312 54 442 214 36 45 chr2 31900257 31900323 -218787531 + MER81 DNA DNA 1 67 -47 4309 90 0 0 chr2 31900323 31900877 -218786977 + MER41A LTR ERV1 1 554 0 442 214 36 45 chr2 31900877 31900922 -218786932 + MER81 DNA DNA 67 111 -3 1978 171 88 79 chr2 31901567 31902110 -218785744 + LTR10A LTR ERV1 1 548 -61 334 292 37 27 chr2 31902367 31902477 -218785377 + MIR SINE MIR 38 147 -67 2403 106 59 0 chr2 31902477 31902817 -218785037 + MLT1A1 LTR MaLR 1 360 -5 5410 94 1 11 chr2 31902818 31903561 -218784293 + LTR17 LTR ERV1 1 780 0 1372 200 34 0 chr2 31903717 31903982 -218783872 + AluJo SINE Alu 5 278 -34 198 103 0 0 chr2 31904014 31904043 -218783811 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 251 233 233 12 chr2 31904536 31904622 -218783232 - MIR SINE MIR -70 138 34 1760 151 23 0 chr2 31904770 31905069 -218782785 - AluSq SINE Alu -7 306 1 204 97 0 0 chr2 31905150 31905181 -218782673 + (GA)n Simple_repeat Simple_repeat 2 32 0 279 360 8 8 chr2 31905339 31905464 -218782390 - L2 LINE L2 0 3272 3148 408 281 0 0 chr2 31905477 31905573 -218782281 + MIR SINE MIR 59 154 -108 4421 98 32 33 chr2 31906733 31907394 -218780460 - PABL_A LTR ERV1 0 660 1 1945 145 3 0 chr2 31907974 31908278 -218779576 + AluSx SINE Alu 1 305 -7 535 268 111 26 chr2 31908677 31908830 -218779024 + MLT1I LTR MaLR 98 263 -146 2105 95 3 26 chr2 31908988 31909292 -218778562 + AluSp SINE Alu 1 297 -16 1726 152 26 3 chr2 31909841 31910143 -218777711 - AluJb SINE Alu -3 309 1 469 152 13 0 chr2 31910312 31910391 -218777463 + MLT1I LTR MaLR 324 403 -6 576 254 35 7 chr2 31910401 31910543 -218777311 - MIR3 SINE MIR -33 175 30 3416 151 25 79 chr2 31910565 31911296 -218776558 - LTR8 LTR ERV1 0 691 1 480 242 40 16 chr2 31911332 31911456 -218776398 + MIR3 SINE MIR 41 167 -41 3902 160 50 11 chr2 31911578 31912278 -218775576 - LTR8A LTR ERV1 0 727 1 1144 149 21 21 chr2 31912947 31913141 -218774713 + MLT1A1 LTR MaLR 1 194 -171 340 216 114 0 chr2 31913152 31913240 -218774614 - MIR SINE MIR -70 138 41 4857 128 67 5 chr2 31913313 31914089 -218773765 + LTR1B LTR ERV1 1 824 -2 221 293 177 71 chr2 31914409 31914607 -218773247 + MIR SINE MIR 20 238 -24 238 315 74 60 chr2 31916031 31916247 -218771607 - MIR SINE MIR -42 220 2 432 341 68 0 chr2 31916586 31916835 -218771019 + L1PA14 LINE L1 5648 5913 -248 * 2295 155 35 12 chr2 31916617 31917042 -218770812 + L1MB5 LINE L1 5686 6120 -54 271 246 90 49 chr2 31918296 31918418 -218769436 - MIR SINE MIR -44 218 92 1019 251 132 20 chr2 31919112 31919415 -218768439 - MER46C DNA MER2_type 0 338 2 677 287 30 10 chr2 31919415 31919617 -218768237 - MIR SINE MIR -1 261 56 401 287 182 19 chr2 31919915 31920124 -218767730 + MIR SINE MIR 4 246 -16 293 264 69 11 chr2 31920884 31920971 -218766883 + L2 LINE L2 3181 3272 0 294 106 0 0 chr2 31922597 31922644 -218765210 + (TG)n Simple_repeat Simple_repeat 1 47 0 467 321 34 17 chr2 31922980 31923340 -218764514 + ERVL LTR ERVL 4555 4698 -298 334 260 15 1 chr2 31923413 31923503 -218764351 + LTR16A LTR ERVL 5 95 -355 2382 132 3 8 chr2 31923527 31923897 -218763957 - L1PB1 LINE L1 -3 6148 5781 339 262 71 0 chr2 31923897 31923974 -218763880 + L1MC4 LINE L1 6613 6698 -1344 313 71 0 0 chr2 31923974 31924016 -218763838 - L1PB1 LINE L1 -360 5791 5750 15292 182 74 14 chr2 31924016 31930100 -218757754 - L1P5 LINE L1 -357 6510 90 2235 91 0 0 chr2 31930362 31930691 -218757163 - AluSc SINE Alu 0 329 1 459 310 64 23 chr2 31931199 31931370 -218756484 + MIR SINE MIR 20 197 -65 1821 144 14 7 chr2 31931540 31931831 -218756023 - AluJo SINE Alu -19 293 1 4408 135 20 0 chr2 31931831 31932526 -218755328 - L1MC1 LINE L1 -9 6324 5616 579 275 42 0 chr2 31932528 31932670 -218755184 + MIR SINE MIR 107 254 -8 846 204 34 24 chr2 31933942 31934148 -218753706 + MER3 DNA MER1_type 2 209 0 646 310 70 11 chr2 31934196 31934480 -218753374 + L2 LINE L2 2521 2821 -493 861 159 12 65 chr2 31934669 31934839 -218753015 - MER3 DNA MER1_type 0 209 49 470 272 109 105 chr2 31934863 31935176 -218752678 + L2 LINE L2 2958 3271 -1 259 325 53 9 chr2 31935300 31935414 -218752440 + MIR SINE MIR 100 218 -44 533 240 32 32 chr2 31935828 31935982 -218751872 + MER5A DNA MER1_type 10 163 -26 333 151 14 55 chr2 31937434 31937507 -218750347 - L1ME2 LINE L1 -2 6162 6093 235 187 165 55 chr2 31937702 31937793 -218750061 + L1ME4a LINE L1 5703 5803 -2005 232 206 95 0 chr2 31937844 31937907 -218749947 + L1ME4a LINE L1 5983 6051 -70 2443 194 88 40 chr2 31938322 31938445 -218749409 + MLT1E2 LTR MaLR 7 123 -503 2137 110 10 0 chr2 31938445 31938746 -218749108 + AluSx SINE Alu 1 304 -8 2443 194 88 40 chr2 31938746 31939214 -218748640 + MLT1E2 LTR MaLR 123 626 0 288 298 38 127 chr2 31939217 31939509 -218748345 + L2 LINE L2 3004 3269 -3 320 322 75 37 chr2 31939788 31940083 -218747771 + L1MEd LINE L1 12 317 -5802 2340 223 87 49 chr2 31940114 31940826 -218747028 + MER21B LTR ERV1 12 750 -113 232 226 0 32 chr2 31941272 31941334 -218746520 - MIR SINE MIR -10 252 193 463 276 39 108 chr2 31941445 31941778 -218746076 + MLT1I LTR MaLR 94 403 -6 589 266 78 29 chr2 31941791 31942137 -218745717 + L1MEd LINE L1 895 1257 -4862 225 230 40 70 chr2 31942261 31942361 -218745493 + L1M2 LINE L1 2440 2536 -4313 331 346 92 30 chr2 31943115 31943410 -218744444 + L1ME3A LINE L1 5617 5929 -241 2388 219 53 48 chr2 31943424 31943697 -218744157 - L1ME3A LINE L1 -5 6165 5895 1355 176 3 83 chr2 31943697 31943890 -218743964 - AluJb SINE Alu -14 298 140 1738 141 58 0 chr2 31943890 31944181 -218743673 + AluSg SINE Alu 1 308 -2 1355 176 3 83 chr2 31944181 31944311 -218743543 - AluJb SINE Alu -172 140 1 2388 219 53 48 chr2 31944311 31944750 -218743104 - L1ME3A LINE L1 -275 5895 5449 1155 200 5 9 chr2 31945573 31945788 -218742066 - MER20 DNA MER1_type -5 214 1 415 267 123 14 chr2 31946296 31946442 -218741412 - LTR16A1 LTR ERVL -295 162 1 1055 192 18 5 chr2 31946577 31946801 -218741053 - AluJo SINE Alu 0 312 86 355 294 84 20 chr2 31946803 31946994 -218740860 - MIR SINE MIR -48 214 8 546 295 68 10 chr2 31948340 31948547 -218739307 - MIR SINE MIR -24 238 20 354 282 0 0 chr2 31948564 31948642 -218739212 + MIR SINE MIR 109 186 -76 449 250 9 9 chr2 31949154 31949262 -218738592 - MIR SINE MIR -65 197 90 419 317 75 0 chr2 31950582 31950743 -218737111 + MIR3 SINE MIR 21 193 -15 195 310 42 0 chr2 31951507 31951578 -218736276 + MIR SINE MIR 140 213 -49 234 0 0 0 chr2 31952315 31952341 -218735513 + (TG)n Simple_repeat Simple_repeat 2 27 0 289 279 67 42 chr2 31952767 31952932 -218734922 - MIR3 SINE MIR -3 205 37 1790 174 16 20 chr2 31952968 31953273 -218734581 - AluJo SINE Alu -6 306 3 331 318 131 0 chr2 31954285 31954392 -218733462 - L2 LINE L2 0 3272 3152 423 330 11 16 chr2 31956419 31956601 -218731253 + MER5A DNA MER1_type 9 189 0 2231 123 0 3 chr2 31956819 31957129 -218730725 - AluSx SINE Alu -3 309 1 208 276 40 0 chr2 31958355 31958431 -218729423 + L2 LINE L2 3194 3272 0 2264 123 0 0 chr2 31958564 31958874 -218728980 - AluSx SINE Alu -2 310 1 1428 215 45 33 chr2 31959836 31960171 -218727683 + MER58B DNA MER1_type 2 340 -1 483 133 29 0 chr2 31961390 31961495 -218726359 + (TA)n Simple_repeat Simple_repeat 2 109 0 245 206 14 14 chr2 31961543 31961616 -218726238 + L1MCa LINE L1 1995 2067 -4359 356 217 39 72 chr2 31961625 31961805 -218726049 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 * 407 249 35 12 chr2 31961686 31961855 -218725999 + (TA)n Simple_repeat Simple_repeat 2 174 0 209 197 16 0 chr2 31961896 31961957 -218725897 + (CATATA)n Simple_repeat Simple_repeat 3 64 0 212 286 0 0 chr2 31961973 31962036 -218725818 + (CATA)n Simple_repeat Simple_repeat 1 63 0 350 307 104 5 chr2 31962989 31963181 -218724673 + L2 LINE L2 2567 2777 -537 439 254 49 0 chr2 31963617 31963739 -218724115 - MIR SINE MIR -26 236 109 243 272 0 0 chr2 31963776 31963857 -218723997 + (TG)n Simple_repeat Simple_repeat 2 82 0 381 301 41 0 chr2 31966142 31966288 -218721566 - MIR3 SINE MIR -15 193 42 229 244 0 70 chr2 31967361 31967447 -218720407 - MIR SINE MIR -73 189 110 2398 68 3 0 chr2 31968473 31968765 -218719089 - AluSc SINE Alu -3 306 14 3666 237 94 62 chr2 31968942 31970510 -218717344 - HAL1 LINE L1 -10 2497 880 180 367 0 0 chr2 31970640 31970689 -218717165 + L2 LINE L2 3137 3185 -87 884 165 0 0 chr2 31970992 31971125 -218716729 - AluSq/x SINE Alu -180 133 1 9589 212 62 36 chr2 31971501 31974400 -218713454 + L1MDa LINE L1 54 2874 -3666 1456 214 144 42 chr2 31974400 31974858 -218712996 + MLT1D LTR MaLR 1 505 0 9589 212 62 36 chr2 31974858 31975597 -218712257 + L1MDa LINE L1 2874 3788 -2752 1545 176 27 40 chr2 31975597 31975971 -218711883 + L1MA3 LINE L1 5937 6305 0 9589 212 62 36 chr2 31975971 31976075 -218711779 + L1MDa LINE L1 3788 3888 -2652 1948 84 3 1 chr2 31976099 31976376 -218711478 + L1MDa LINE L1 2939 3219 -3321 2794 221 46 34 chr2 31976388 31977178 -218710676 + L1MDa LINE L1 3901 4699 -1841 635 222 108 54 chr2 31977177 31977362 -218710492 + L1MB7 LINE L1 5416 5610 -564 * 209 125 0 25 chr2 31977457 31977497 -218710357 + (CAAAA)n Simple_repeat Simple_repeat 4 42 0 1119 211 76 58 chr2 31978200 31978320 -218709534 + Tigger7 DNA MER2_type 1 117 -2370 2359 94 0 10 chr2 31978320 31978629 -218709225 + AluSx SINE Alu 1 306 -6 1119 211 76 58 chr2 31978629 31979047 -218708807 + Tigger7 DNA MER2_type 117 2487 0 2069 232 59 16 chr2 31980876 31981134 -218706720 + L1MB7 LINE L1 5587 5832 -352 2229 116 7 0 chr2 31981134 31981437 -218706417 + AluSx SINE Alu 1 305 -7 2069 232 59 16 chr2 31981437 31981751 -218706103 + L1MB7 LINE L1 5832 6184 0 225 264 85 19 chr2 31981853 31981959 -218705895 - L1ME4a LINE L1 -110 6011 5899 307 183 113 0 chr2 31984596 31984667 -218703187 - MIR3 SINE MIR -45 163 85 289 267 192 14 chr2 31984691 31984837 -218703017 - MIR SINE MIR -31 231 60 288 248 172 14 chr2 31986492 31986637 -218701217 - L3 LINE CR1 -1 1576 1409 288 262 255 0 chr2 31986941 31987090 -218700764 + MER117 DNA MER1_type 5 191 -6 26 0 0 0 chr2 31987416 31987442 -218700412 + AT_rich Low_complexity Low_complexity 1 26 0 214 273 26 52 chr2 31988742 31988819 -218699035 - L2 LINE L2 -8 3305 3231 860 135 0 30 chr2 31988823 31988956 -218698898 + FLAM_C SINE Alu 2 130 -3 391 296 30 9 chr2 31989385 31989527 -218698327 - MIR SINE MIR -31 177 47 652 197 8 0 chr2 31990059 31990186 -218697668 + MIR SINE MIR 45 172 -90 642 212 84 80 chr2 31990685 31991061 -218696793 + L1ME4a LINE L1 5704 6077 -44 865 249 11 51 chr2 31991119 31991392 -218696462 - MIR SINE MIR 0 262 1 997 217 77 0 chr2 31991393 31991600 -218696254 + MER58A DNA MER1_type 1 223 -1 324 0 0 0 chr2 31991637 31991673 -218696181 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 186 346 0 10 chr2 31992302 31992403 -218695451 + L2 LINE L2 2897 2996 -276 305 245 19 28 chr2 31992413 31992519 -218695335 + L1ME4a LINE L1 5837 5941 -180 211 203 43 29 chr2 31992529 31992598 -218695256 + (TAGA)n Simple_repeat Simple_repeat 2 71 0 289 250 24 40 chr2 31992619 31992743 -218695111 + L1ME4a LINE L1 5942 6063 -58 187 311 33 0 chr2 31992892 31992953 -218694901 + L2 LINE L2 3247 3309 -4 1182 108 0 0 chr2 31993086 31993274 -218694580 - AluSp/q SINE Alu 0 344 157 288 253 33 11 chr2 31993754 31993845 -218694009 + MIR SINE MIR 48 140 -122 578 291 44 35 chr2 31993875 31994102 -218693752 - MIR SINE MIR 0 262 34 360 253 6 17 chr2 31994202 31994376 -218693478 + (TAG)n Simple_repeat Simple_repeat 1 172 0 265 333 0 11 chr2 31994399 31994486 -218693368 + (CAG)n Simple_repeat Simple_repeat 1 86 0 571 211 12 0 chr2 31994496 31994662 -218693192 + (TAG)n Simple_repeat Simple_repeat 1 168 0 189 175 0 0 chr2 31994696 31994736 -218693118 + (TAA)n Simple_repeat Simple_repeat 2 41 0 272 286 0 7 chr2 31994771 31994918 -218692936 + (TAG)n Simple_repeat Simple_repeat 2 147 0 573 239 0 0 chr2 31994938 31995118 -218692736 + (TAG)n Simple_repeat Simple_repeat 1 180 0 1588 186 30 20 chr2 31995853 31996323 -218691531 + AluJb SINE Alu 3 475 0 348 242 61 20 chr2 31997635 31997734 -218690120 - MIR SINE MIR -74 188 86 1863 189 58 58 chr2 31998260 31998399 -218689455 + MER63B DNA MER1_type 1 139 -923 2440 187 77 4 chr2 31998399 31998918 -218688936 + MER68 LTR ERV1 4 560 -2 1863 189 58 58 chr2 31998918 31999095 -218688759 + MER63B DNA MER1_type 139 320 -742 2181 130 0 0 chr2 31999095 31999394 -218688460 - AluSx SINE Alu -7 305 7 1863 189 58 58 chr2 31999394 31999511 -218688343 + MER63B DNA MER1_type 319 435 -1 21 36 0 0 chr2 32000486 32000514 -218687340 + AT_rich Low_complexity Low_complexity 1 28 0 473 170 57 60 chr2 32000882 32001020 -218686834 + MER5A DNA MER1_type 25 189 0 380 333 31 8 chr2 32001375 32001504 -218686350 - MIR3 SINE MIR -67 141 10 223 176 24 240 chr2 32001510 32001635 -218686219 + MER5B DNA MER1_type 75 172 -6 345 24 0 0 chr2 32002224 32002266 -218685588 + (TG)n Simple_repeat Simple_repeat 2 43 0 687 187 47 0 chr2 32002292 32002442 -218685412 - MIR SINE MIR -32 230 74 566 175 58 42 chr2 32003196 32003316 -218684538 + FRAM SINE Alu 42 163 -13 332 309 32 8 chr2 32004052 32004175 -218683679 + L2 LINE L2 3142 3267 -5 330 268 55 8 chr2 32004194 32004321 -218683533 - MIR SINE MIR -70 192 60 246 289 29 48 chr2 32004830 32004934 -218682920 - MIR SINE MIR -76 186 85 722 130 0 8 chr2 32005027 32005150 -218682704 + (GGAA)n Simple_repeat Simple_repeat 2 123 0 216 0 0 0 chr2 32005496 32005520 -218682334 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 231 311 93 71 chr2 32005641 32005824 -218682030 - L2 LINE L2 -91 3181 2995 192 77 0 0 chr2 32007577 32007603 -218680251 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 5773 199 36 22 chr2 32007951 32009946 -218677908 - L1MC1 LINE L1 -5 6608 4592 * 11670 191 60 21 chr2 32009942 32010500 -218677354 - L1MC1 LINE L1 -2524 3902 3367 2250 104 0 0 chr2 32010500 32010825 -218677029 - AluSg SINE Alu 0 327 3 11670 191 60 21 chr2 32010825 32014020 -218673834 - L1MC1 LINE L1 -3059 3367 2 246 303 119 28 chr2 32014574 32014697 -218673157 - MIR SINE MIR -12 250 140 544 77 26 0 chr2 32014697 32014775 -218673079 + MADE1 DNA Mariner 1 80 0 246 303 119 28 chr2 32014775 32014869 -218672985 - MIR SINE MIR -122 140 13 270 258 90 58 chr2 32015937 32016092 -218671762 + L2 LINE L2 2937 3096 -176 593 293 39 0 chr2 32016912 32017120 -218670734 + MIR SINE MIR 43 258 -4 669 229 146 4 chr2 32017177 32017417 -218670437 - L2 LINE L2 -811 2503 2230 2014 136 61 12 chr2 32017676 32018022 -218669832 + THE1B LTR MaLR 1 363 -1 1908 68 0 4 chr2 32018338 32018572 -218669282 - AluY SINE Alu -7 304 72 313 291 60 8 chr2 32018736 32018853 -218669001 - MER113 DNA MER1_type? -115 406 284 294 331 38 15 chr2 32019969 32020102 -218667752 - L2 LINE L2 0 3272 3137 965 264 19 19 chr2 32020277 32020542 -218667312 + MER93a LTR ERV1 128 392 -10 366 303 34 8 chr2 32020563 32020682 -218667172 - L2 LINE L2 -165 3107 2986 216 260 0 0 chr2 32021046 32021096 -218666758 + (CA)n Simple_repeat Simple_repeat 1 50 0 23 33 0 0 chr2 32022696 32022726 -218665128 + AT_rich Low_complexity Low_complexity 1 30 0 322 258 94 31 chr2 32023222 32023381 -218664473 + MIR SINE MIR 94 262 0 2246 150 75 5 chr2 32024181 32024581 -218663273 + MSTA LTR MaLR 1 428 0 606 235 162 0 chr2 32026588 32026792 -218661062 + L1MC4 LINE L1 6979 7215 -827 5284 99 11 5 chr2 32026792 32027547 -218660307 + L1MA2 LINE L1 5546 6304 0 4674 143 72 19 chr2 32027640 32028505 -218659349 + L1MB3 LINE L1 5270 6180 -3 2112 235 69 25 chr2 32028492 32029107 -218658747 + L1MC4 LINE L1 7182 7831 -211 * 2170 103 7 3 chr2 32029107 32029408 -218658446 + AluSg1 SINE Alu 1 302 -7 2112 235 69 25 chr2 32029408 32029477 -218658377 + L1MC4 LINE L1 7831 7896 -146 21 82 0 0 chr2 32029489 32029538 -218658316 + AT_rich Low_complexity Low_complexity 1 49 0 480 242 8 0 chr2 32029586 32029714 -218658140 + L1MC4 LINE L1 7914 8042 0 203 344 0 0 chr2 32029765 32029826 -218658028 - L2 LINE L2 0 3272 3212 181 377 54 15 chr2 32029897 32030027 -218657827 + L2 LINE L2 3122 3256 -16 353 75 19 0 chr2 32030038 32030091 -218657763 + (TGAG)n Simple_repeat Simple_repeat 2 55 0 2218 35 0 0 chr2 32030489 32030748 -218657106 + L1PA5 LINE L1 5895 6153 -1 214 373 0 0 chr2 32031237 32031312 -218656542 - L3 LINE CR1 -5 1572 1498 261 0 0 0 chr2 32033841 32033870 -218653984 + (A)n Simple_repeat Simple_repeat 1 29 0 435 158 25 125 chr2 32034131 32034251 -218653603 - MER81 DNA DNA -2 112 5 2121 121 7 0 chr2 32034267 32034557 -218653297 + AluSx SINE Alu 1 292 -20 889 174 54 27 chr2 32034597 32034781 -218653073 + MER20 DNA MER1_type 31 219 0 300 267 100 33 chr2 32034992 32035112 -218652742 + MIR SINE MIR 20 147 -115 1130 195 46 4 chr2 32035455 32035717 -218652137 - L1MA8 LINE L1 -3 6288 6016 950 131 0 0 chr2 32035718 32035848 -218652006 - AluSx SINE Alu -37 275 146 995 68 0 0 chr2 32036028 32036145 -218651709 - AluSx SINE Alu -170 142 26 4246 223 49 42 chr2 32036149 32038409 -218649445 - L1 LINE L1 -3664 3442 1478 1938 161 10 82 chr2 32038414 32038806 -218649048 - L1 LINE L1 -6666 364 1 393 264 28 56 chr2 32039727 32039871 -218647983 - MIR SINE MIR -56 206 67 310 301 57 8 chr2 32040008 32040131 -218647723 + L2 LINE L2 3136 3264 -8 724 300 60 23 chr2 32040894 32041330 -218646524 + MLT1J1 LTR MaLR 1 446 0 301 243 72 36 chr2 32041331 32041442 -218646412 + L2 LINE L2 3199 3313 0 208 186 0 68 chr2 32041573 32041632 -218646222 + T-rich Low_complexity Low_complexity 4 58 0 412 324 44 28 chr2 32041665 32041847 -218646007 + MIR3 SINE MIR 16 200 -8 2231 172 71 0 chr2 32042275 32042670 -218645184 + MSTB LTR MaLR 4 426 0 398 268 172 25 chr2 32043648 32043846 -218644008 - MIR SINE MIR -7 255 29 189 143 24 24 chr2 32045375 32045417 -218642437 + MIR3 SINE MIR 164 205 -3 494 31 16 0 chr2 32045426 32045490 -218642364 + (TG)n Simple_repeat Simple_repeat 2 66 0 2081 149 0 0 chr2 32045664 32045965 -218641889 - AluSx SINE Alu -9 303 3 1246 307 71 44 chr2 32046251 32046926 -218640928 + MER115 DNA AcHobo 1 693 0 205 324 120 32 chr2 32047149 32047365 -218640489 + L2 LINE L2 2826 3060 -212 297 315 68 17 chr2 32049718 32049889 -218637965 + MIR SINE MIR 3 183 -75 2499 75 0 3 chr2 32050247 32050554 -218637300 + AluY SINE Alu 1 306 -5 422 323 91 15 chr2 32050997 32051195 -218636659 - MLT1I LTR MaLR -142 267 55 1684 310 107 78 chr2 32051537 32053722 -218634132 - L2 LINE L2 -4 3268 1012 1490 175 101 27 chr2 32053851 32054216 -218633638 - L1ME2 LINE L1 -19 6145 5754 1107 243 97 7 chr2 32054217 32054679 -218633175 - L1ME2 LINE L1 -536 5628 5130 11318 22 0 0 chr2 32054717 32056106 -218631748 - L1PA3 LINE L1 -948 5198 3810 7497 32 2 0 chr2 32056106 32057125 -218630729 + L1PA3 LINE L1 5185 6205 0 1992 210 102 39 chr2 32057157 32057360 -218630494 - L1ME2 LINE L1 -1395 4751 4562 2454 55 7 3 chr2 32057360 32057670 -218630184 + AluY SINE Alu 1 311 0 1992 210 102 39 chr2 32057670 32058114 -218629740 - L1ME2 LINE L1 -1584 4562 4063 2319 98 0 28 chr2 32058562 32058880 -218628974 + AluSx SINE Alu 1 309 -3 298 332 159 5 chr2 32059123 32059343 -218628511 - MIR SINE MIR -5 257 4 339 298 32 0 chr2 32059405 32059499 -218628355 + L2 LINE L2 3150 3246 -26 236 305 43 39 chr2 32059735 32060017 -218627837 - L1ME2 LINE L1 -3754 2392 2110 2961 227 22 11 chr2 32060339 32061145 -218626709 + L1 LINE L1 2396 3210 -2936 1848 170 56 17 chr2 32061149 32061508 -218626346 - MSTA LTR MaLR -54 374 2 21 36 0 0 chr2 32061722 32061750 -218626104 + AT_rich Low_complexity Low_complexity 1 28 0 4076 103 31 5 chr2 32061751 32062362 -218625492 - L1PA14 LINE L1 -3 6158 5532 554 78 0 0 chr2 32062362 32062439 -218625415 + L1PA14 LINE L1 5451 5527 -634 5270 76 30 60 chr2 32062478 32063337 -218624517 + L1MA1 LINE L1 5468 6300 -2 272 177 51 13 chr2 32064305 32064384 -218623470 + MER103 DNA DNA 25 106 -60 2673 133 45 6 chr2 32064503 32064970 -218622884 - L1MB3 LINE L1 0 6183 5699 2784 79 3 0 chr2 32067016 32067370 -218620484 + THE1A LTR MaLR 1 355 0 18624 169 28 9 chr2 32068020 32069746 -218618108 + L1MA2 LINE L1 13 1705 -5860 876 69 46 17 chr2 32069746 32069919 -218617935 + GA-rich Low_complexity Low_complexity 1 178 0 18624 169 28 9 chr2 32069919 32071645 -218616209 + L1MA2 LINE L1 1705 3531 -4034 8975 131 43 21 chr2 32071646 32073335 -218614519 - MER52-int LTR ERV1 -2502 5035 3310 4087 139 16 27 chr2 32073341 32074491 -218613363 - MER52-int LTR ERV1 -4004 1451 632 320 250 0 13 chr2 32074491 32074567 -218613287 - MER52-int LTR ERV1 -3548 3657 3583 4386 204 39 46 chr2 32074583 32075729 -218612125 - MER52-int LTR ERV1 -436 4781 411 2634 169 97 12 chr2 32075945 32076842 -218611012 - LTR28 LTR ERV1 0 1020 1 13726 158 11 16 chr2 32076842 32080764 -218607090 + L1MA2 LINE L1 3823 7723 0 371 280 34 42 chr2 32081090 32081235 -218606619 - MIR SINE MIR -62 146 6 548 296 133 4 chr2 32081746 32081915 -218605939 - L2 LINE L2 -470 2844 2637 378 0 0 0 chr2 32081915 32081957 -218605897 + (TG)n Simple_repeat Simple_repeat 2 43 0 548 296 133 4 chr2 32081957 32082013 -218605841 - L2 LINE L2 -677 2637 2590 1241 219 72 42 chr2 32082022 32082469 -218605385 + MLT1C LTR MaLR 6 465 -2 1532 214 76 7 chr2 32082472 32082937 -218604917 - MLT1F LTR MaLR 0 542 1 1892 285 282 18 chr2 32082937 32084261 -218603593 - L2 LINE L2 -721 2593 921 949 221 28 9 chr2 32084356 32084573 -218603281 + MER58A DNA MER1_type 1 221 -3 534 154 115 0 chr2 32084779 32084883 -218602971 + FLAM_A SINE Alu 22 137 -5 849 186 9 38 chr2 32084907 32085117 -218602737 - MER96B DNA MER1_type? 0 417 214 2514 103 31 14 chr2 32086245 32086603 -218601251 + THE1B LTR MaLR 1 364 0 2077 94 0 0 chr2 32087014 32087289 -218600565 - AluY SINE Alu -6 305 31 761 313 63 0 chr2 32087428 32087696 -218600158 + HERVL LTR ERVL 2996 3280 -2374 1594 339 79 20 chr2 32087917 32088971 -218598883 - ERVL LTR ERVL -3264 2500 1348 2272 123 3 0 chr2 32088971 32089281 -218598573 - AluSx SINE Alu -1 311 1 1594 339 79 20 chr2 32089281 32089573 -218598281 - ERVL LTR ERVL -4416 1348 1075 377 235 17 62 chr2 32089597 32089776 -218598078 - LTR33A LTR ERVL 0 523 353 2093 158 31 21 chr2 32089776 32089929 -218597925 - MLT1B LTR MaLR 0 390 240 2116 193 68 36 chr2 32089929 32090431 -218597423 - MLT2B1 LTR ERVL 0 520 3 2093 158 31 21 chr2 32090431 32090662 -218597192 - MLT1B LTR MaLR -150 240 2 228 329 49 0 chr2 32090995 32091138 -218596716 - LTR33A LTR ERVL -371 152 3 548 326 42 34 chr2 32091153 32091392 -218596462 - L2 LINE L2 -266 3047 2807 385 257 22 52 chr2 32091408 32091544 -218596310 + MER94 DNA DNA 3 134 0 833 252 77 15 chr2 32091544 32091818 -218596036 - L2 LINE L2 -513 2801 2511 1285 313 47 27 chr2 32091836 32092433 -218595421 + L2 LINE L2 2115 2723 -591 247 285 99 29 chr2 32094557 32094729 -218593125 - L2 LINE L2 -1152 2162 1979 859 230 75 5 chr2 32094754 32094954 -218592900 + MLT1F1 LTR MaLR 354 567 0 261 302 94 55 chr2 32094955 32095190 -218592664 - L2 LINE L2 -1427 1887 1644 474 350 63 5 chr2 32096680 32096903 -218590951 - MIR SINE MIR -26 236 1 15638 173 14 10 chr2 32097457 32104734 -218583120 - L1PA14 LINE L1 -11 7588 11 619 234 8 8 chr2 32104764 32104892 -218582962 - FLAM_C SINE Alu -4 129 2 1045 305 100 56 chr2 32104932 32106064 -218581790 - L1 LINE L1 -1131 5015 3833 2165 134 3 6 chr2 32106431 32106744 -218581110 - AluSx SINE Alu 0 312 1 2129 130 0 0 chr2 32106753 32107045 -218580809 - AluSg SINE Alu -18 292 1 23 33 0 0 chr2 32107087 32107117 -218580737 + AT_rich Low_complexity Low_complexity 1 30 0 7685 92 21 36 chr2 32107201 32110503 -218577351 + L1PA6 LINE L1 12 3176 -2978 3709 88 2 0 chr2 32110503 32110967 -218576887 + L1PA5 LINE L1 5688 6153 -1 7685 92 21 36 chr2 32110967 32113900 -218573954 + L1PA6 LINE L1 3176 6152 -2 335 234 170 14 chr2 32113906 32114047 -218573807 - L1 LINE L1 -2867 3279 3117 889 222 106 71 chr2 32114048 32114427 -218573427 + L1ME2 LINE L1 5668 6059 -105 306 103 0 0 chr2 32114427 32114466 -218573388 - THE1A LTR MaLR -2 353 315 44368 42 11 1 chr2 32114466 32120556 -218567298 + L1PA4 LINE L1 5 6153 -2 21 0 0 0 chr2 32120972 32120993 -218566861 + AT_rich Low_complexity Low_complexity 1 21 0 1630 228 1 6 chr2 32122040 32122767 -218565087 + L1PA3 LINE L1 5432 6155 0 2273 96 29 44 chr2 32122798 32123142 -218564712 - THE1B LTR MaLR -25 339 1 549 200 9 0 chr2 32123142 32123247 -218564607 + L1ME1 LINE L1 6055 6160 -6 1713 213 64 7 chr2 32123258 32123666 -218564188 + L1ME2 LINE L1 5428 5858 -306 1193 189 13 17 chr2 32125870 32126108 -218561746 - MER96B DNA MER1_type? -17 400 164 500 283 27 33 chr2 32126552 32126736 -218561118 + L1ME1 LINE L1 346 528 -5868 2091 257 66 61 chr2 32126750 32128298 -218559556 + L1ME1 LINE L1 1273 2848 -3558 1106 141 20 0 chr2 32128312 32128567 -218559287 - L1M2 LINE L1 -743 5403 5190 6353 237 40 39 chr2 32128594 32129384 -218558470 + L1ME1 LINE L1 3420 4207 -2219 233 57 29 0 chr2 32129384 32129419 -218558435 + (CA)n Simple_repeat Simple_repeat 1 36 0 6353 237 40 39 chr2 32129419 32130691 -218557163 + L1ME1 LINE L1 4207 5552 -874 1552 169 61 4 chr2 32130691 32130970 -218556884 + AluJo SINE Alu 7 301 -11 6353 237 40 39 chr2 32130970 32131609 -218556245 + L1ME1 LINE L1 5552 6188 -238 7742 124 54 14 chr2 32131625 32132871 -218554983 - HSMAR2 DNA Mariner -4 1298 4 601 276 41 0 chr2 32132887 32133097 -218554757 + L1ME1 LINE L1 6217 6594 0 306 287 108 23 chr2 32133678 32133807 -218554047 - L3 LINE CR1 -11 1566 1427 2388 137 129 3 chr2 32134373 32134753 -218553101 - MSTA LTR MaLR 0 428 1 267 54 0 0 chr2 32134930 32134967 -218552887 + (TG)n Simple_repeat Simple_repeat 2 38 0 2465 69 0 7 chr2 32134989 32135292 -218552562 - AluY SINE Alu -10 301 1 1480 261 55 23 chr2 32135787 32136519 -218551335 - L2 LINE L2 -13 3300 2554 1648 242 90 35 chr2 32137320 32138011 -218549843 - L1MCc LINE L1 -4888 1535 964 516 204 10 10 chr2 32138011 32138114 -218549740 - MER81 DNA DNA -6 108 6 268 255 53 11 chr2 32138119 32138213 -218549641 - L1MCc LINE L1 -6070 353 256 374 289 56 52 chr2 32138266 32138515 -218549339 - L1MCc LINE L1 -5525 898 649 1133 99 3 2 chr2 32138862 32139166 -218548688 + THE1A LTR MaLR 1 355 0 12318 99 11 0 chr2 32139166 32140726 -218547128 + THE1A-int LTR MaLR 1 1578 -2 2752 52 86 0 chr2 32140728 32141055 -218546799 + THE1A LTR MaLR 1 355 0 270 253 12 12 chr2 32141083 32141166 -218546688 - L1MCc LINE L1 -5968 455 373 542 250 0 0 chr2 32141172 32141284 -218546570 - MER81 DNA DNA 0 114 3 982 257 109 3 chr2 32141286 32141590 -218546264 - L1MCc LINE L1 -6070 353 18 339 280 120 0 chr2 32143759 32143884 -218543970 + MIR3 SINE MIR 62 201 -7 564 273 60 28 chr2 32145222 32145438 -218542416 - Charlie8 DNA MER1_type -2194 223 1 690 183 13 20 chr2 32146748 32146901 -218540953 + L1MB4 LINE L1 6029 6180 0 2076 201 25 38 chr2 32147042 32147515 -218540339 + MLT1C LTR MaLR 1 467 0 198 182 57 125 chr2 32148754 32148795 -218539059 - MER5B DNA MER1_type 0 178 144 1786 149 14 4 chr2 32148795 32149109 -218538745 + AluSx SINE Alu 1 317 0 198 182 57 125 chr2 32149109 32149154 -218538700 - MER5B DNA MER1_type -34 144 97 527 273 125 55 chr2 32152179 32152596 -218535258 + MLT1L LTR MaLR 170 615 0 342 0 0 0 chr2 32152670 32152708 -218535146 + (CA)n Simple_repeat Simple_repeat 1 38 0 294 241 11 11 chr2 32152708 32152795 -218535059 - L1MC4a LINE L1 -1879 5929 5843 832 292 35 36 chr2 32153156 32153269 -218534585 - L2 LINE L2 -243 3070 2958 1325 136 63 23 chr2 32153269 32153490 -218534364 - MER30 DNA MER1_type 0 230 1 832 292 35 36 chr2 32153490 32153905 -218533949 - L2 LINE L2 -355 2958 2542 24 32 0 0 chr2 32154294 32154325 -218533529 + AT_rich Low_complexity Low_complexity 1 31 0 230 342 13 26 chr2 32154452 32154528 -218533326 - MIR SINE MIR -102 106 32 183 246 0 0 chr2 32154900 32154957 -218532897 + (CA)n Simple_repeat Simple_repeat 2 58 0 2385 95 0 0 chr2 32155332 32155628 -218532226 - AluSg SINE Alu -14 296 1 240 299 276 0 chr2 32156177 32156311 -218531543 + MIR SINE MIR 12 182 -80 649 220 126 27 chr2 32156547 32156901 -218530953 - MLT1J2 LTR MaLR 0 450 20 3067 267 102 29 chr2 32157566 32158014 -218529840 + L2 LINE L2 1712 2126 -1188 1045 201 115 75 chr2 32158014 32158362 -218529492 + MLT1A1 LTR MaLR 4 365 0 3067 267 102 29 chr2 32158362 32159008 -218528846 + L2 LINE L2 2126 2886 -428 713 286 97 24 chr2 32158987 32159277 -218528577 + L2 LINE L2 3001 3311 -2 * 2581 264 64 24 chr2 32159356 32160290 -218527564 + L1MDa LINE L1 19 1139 -5401 1260 181 53 51 chr2 32160288 32160775 -218527079 + L1MDa LINE L1 2163 2650 -3890 * 5049 157 9 34 chr2 32160848 32161830 -218526024 + L1M4c LINE L1 17 974 -5410 3539 191 42 14 chr2 32161811 32162524 -218525330 + L1MB3 LINE L1 12 744 -6821 * 532 124 11 0 chr2 32162525 32162614 -218525240 + L1MA3 LINE L1 6214 6303 -2 993 193 15 20 chr2 32162620 32162839 -218525015 + AluJo SINE Alu 87 304 0 6233 214 83 27 chr2 32162839 32166679 -218521175 + L1MB3 LINE L1 2136 5761 -1804 2515 159 9 2 chr2 32166679 32167120 -218520734 + L1PA16 LINE L1 5723 6166 0 2232 91 0 3 chr2 32167123 32167445 -218520409 + AluSp SINE Alu 1 321 0 6233 214 83 27 chr2 32167445 32167535 -218520319 + L1MB3 LINE L1 5762 6290 -1275 368 141 16 0 chr2 32167535 32167599 -218520255 + MLT2B3 LTR ERVL 1 65 -489 1740 175 70 96 chr2 32167701 32168147 -218519707 + MLT2B3 LTR ERVL 75 508 -46 255 93 0 0 chr2 32168171 32168214 -218519640 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 299 161 0 0 chr2 32168223 32168279 -218519575 + MLT2B3 LTR ERVL 465 520 0 4093 173 56 13 chr2 32168279 32169390 -218518464 + L1MB3 LINE L1 6286 7451 -151 1981 113 0 0 chr2 32169390 32169704 -218518150 - AluY SINE Alu 0 330 17 4093 173 56 13 chr2 32169704 32169861 -218517993 + L1MB3 LINE L1 7451 7600 -2 1587 262 25 21 chr2 32169879 32170490 -218517364 + L1MC/D LINE L1 2315 2927 -3219 3047 245 80 36 chr2 32170560 32171659 -218516195 + L1MC/D LINE L1 3505 4674 -1472 1799 181 16 11 chr2 32171659 32172023 -218515831 - MER47A DNA MER2_type 0 366 1 3047 245 80 36 chr2 32172023 32172264 -218515590 + L1MC/D LINE L1 4674 4903 -1243 532 203 8 0 chr2 32172269 32172392 -218515462 + L1MC/D LINE L1 5052 5175 -971 686 299 55 30 chr2 32172395 32172759 -218515095 + L1M3c LINE L1 523 895 -5768 2527 252 21 13 chr2 32172875 32173962 -218513892 + L1M3c LINE L1 1287 2360 -4373 230 192 0 0 chr2 32173966 32174018 -218513836 + L1MC/D LINE L1 5774 5825 -417 519 17 0 0 chr2 32175233 32175293 -218512561 + (TG)n Simple_repeat Simple_repeat 2 61 0 300 308 19 28 chr2 32175304 32175411 -218512443 - MIR SINE MIR -127 135 30 442 280 101 31 chr2 32175812 32176069 -218511785 + MLT1K LTR MaLR 311 585 -3 741 200 8 0 chr2 32176133 32176263 -218511591 + FLAM_A SINE Alu 1 131 -2 1160 224 135 70 chr2 32176637 32177111 -218510743 + MLT1D LTR MaLR 1 505 0 1181 238 24 4 chr2 32177192 32177444 -218510410 - MIR SINE MIR -4 258 2 314 281 34 34 chr2 32177461 32177639 -218510215 + MER5B DNA MER1_type 1 178 0 1411 194 30 33 chr2 32178605 32178966 -218508888 - MLT1C LTR MaLR -1 466 107 307 263 26 0 chr2 32178966 32179042 -218508812 + Tigger3(Golem) DNA MER2_type 1 78 -2951 * 1244 166 0 0 chr2 32179034 32179245 -218508609 + Tigger3(Golem) DNA MER2_type 2816 3026 -3 369 180 135 0 chr2 32179245 32179329 -218508525 - MLT1C LTR MaLR -366 101 6 396 0 0 0 chr2 32180145 32180189 -218507665 + (CA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr2 32182100 32182121 -218505733 + AT_rich Low_complexity Low_complexity 1 21 0 1494 120 52 4 chr2 32182555 32182822 -218505032 - L1MA3 LINE L1 -2 6303 6024 1204 122 11 0 chr2 32182943 32183132 -218504722 + L1PA16 LINE L1 5954 6144 -22 3420 263 93 18 chr2 32183634 32185157 -218502697 + L1ME LINE L1 37 1672 -4724 2983 247 38 34 chr2 32185158 32186862 -218500992 + L1ME LINE L1 1724 3411 -2804 315 305 45 32 chr2 32187379 32187533 -218500321 - L1ME LINE L1 -328 5793 5638 216 0 0 0 chr2 32187742 32187766 -218500088 + (TG)n Simple_repeat Simple_repeat 2 25 0 435 245 12 20 chr2 32187833 32188059 -218499795 - L1ME1 LINE L1 -105 6061 5678 3925 177 55 25 chr2 32188059 32189534 -218498320 - MER52A LTR ERV1 0 1755 1 1609 211 25 0 chr2 32189534 32189889 -218497965 - L1ME1 LINE L1 -488 5678 5315 1069 186 30 89 chr2 32189895 32190233 -218497621 + L1ME LINE L1 4934 5251 -964 9535 159 33 1 chr2 32190237 32192763 -218495091 + L1PA15 LINE L1 3540 6144 -21 635 163 14 7 chr2 32192778 32192919 -218494935 + L1ME LINE L1 5243 5384 -831 263 309 159 0 chr2 32193476 32193602 -218494252 + MIR SINE MIR 111 256 -6 328 291 45 8 chr2 32194592 32194726 -218493128 + MIR3 SINE MIR 1 139 -69 972 207 140 0 chr2 32195127 32195320 -218492534 + MER58A DNA MER1_type 2 221 -3 204 282 214 0 chr2 32195581 32195712 -218492142 + MIR3 SINE MIR 19 177 -31 294 288 0 99 chr2 32195773 32195884 -218491970 - L2 LINE L2 -181 3091 2992 7284 26 0 0 chr2 32196307 32197467 -218490387 + L1HS LINE L1 4994 6153 -2 180 0 0 0 chr2 32197471 32197491 -218490363 + (A)n Simple_repeat Simple_repeat 1 20 0 412 256 41 8 chr2 32197721 32197842 -218490012 - L2 LINE L2 0 3313 3189 255 209 127 18 chr2 32198108 32198218 -218489636 + L1ME LINE L1 5655 5776 -414 40 59 0 0 chr2 32198529 32198597 -218489257 + AT_rich Low_complexity Low_complexity 1 68 0 642 276 82 30 chr2 32198633 32198865 -218488989 + MIR SINE MIR 1 244 -18 200 194 0 0 chr2 32199433 32199469 -218488385 + L2 LINE L2 3233 3268 -4 285 331 69 0 chr2 32199899 32200029 -218487825 + MIR SINE MIR 76 214 -48 21 0 0 0 chr2 32200758 32200779 -218487075 + GC_rich Low_complexity Low_complexity 1 21 0 221 348 69 29 chr2 32202881 32203085 -218484769 + L2 LINE L2 2191 2402 -912 468 264 135 16 chr2 32203567 32203760 -218484094 - MLT1H LTR MaLR -320 229 14 432 243 79 7 chr2 32203767 32203919 -218483935 - L1ME3A LINE L1 -19 6151 5989 342 115 0 0 chr2 32203922 32203983 -218483871 + (A)n Simple_repeat Simple_repeat 1 61 0 472 184 0 0 chr2 32203984 32204071 -218483783 - L1ME3A LINE L1 -190 5980 5894 1716 199 45 13 chr2 32204118 32204514 -218483340 - MER74A LTR ERVL -70 488 80 253 263 105 13 chr2 32204588 32204740 -218483114 + L1MEc LINE L1 660 825 -5571 559 282 62 46 chr2 32204746 32205051 -218482803 - MER21B LTR ERV1 -153 710 401 15294 159 69 20 chr2 32205051 32206332 -218481522 + L1M1 LINE L1 27 1244 -6321 1192 82 18 6 chr2 32206332 32206528 -218481326 - L1PB1 LINE L1 0 6151 5980 15294 159 69 20 chr2 32206528 32207329 -218480525 + L1M1 LINE L1 1244 2004 -5561 6467 72 10 12 chr2 32207329 32208221 -218479633 + L1PA8 LINE L1 5270 6159 -13 15294 159 69 20 chr2 32208221 32209146 -218478708 + L1M1 LINE L1 2004 3183 -4382 2444 106 21 5 chr2 32209153 32209531 -218478323 + L1PB1 LINE L1 1 384 -6479 3590 150 21 38 chr2 32209898 32210612 -218477242 + L1PB1 LINE L1 397 1098 -5765 1097 41 14 0 chr2 32210606 32210752 -218477102 - L1PA4 LINE L1 -1613 4533 4386 * 7229 48 2 1 chr2 32210752 32212406 -218475448 + L1PA4 LINE L1 4502 6154 -1 12910 195 24 11 chr2 32212477 32213229 -218474625 + L1PB1 LINE L1 1084 1825 -5042 3000 31 0 0 chr2 32213229 32213581 -218474273 + L1PA3 LINE L1 5804 6155 0 12910 195 24 11 chr2 32213581 32216442 -218471412 + L1PB1 LINE L1 1825 4847 -2020 1784 128 88 0 chr2 32216442 32216715 -218471139 + AluSg SINE Alu 6 302 -8 12910 195 24 11 chr2 32216715 32218758 -218469096 + L1PB1 LINE L1 4847 6862 -5 4008 180 47 9 chr2 32218759 32220135 -218467719 + L1MA2 LINE L1 3168 4600 -2965 4579 134 16 6 chr2 32220137 32220930 -218466924 - L1PA13 LINE L1 0 6163 5363 8399 147 18 17 chr2 32220930 32221303 -218466551 + L1MA2 LINE L1 4968 5339 -2384 12728 150 32 2 chr2 32221303 32224372 -218463482 + L1PA11 LINE L1 3060 6165 -9 8399 147 18 17 chr2 32224372 32226741 -218461113 + L1MA2 LINE L1 5339 7714 -9 690 231 60 112 chr2 32226741 32227088 -218460766 - MER77 LTR ERV1 -113 492 164 841 188 6 0 chr2 32227094 32227254 -218460600 - MLT1C LTR MaLR -2 465 305 439 224 135 26 chr2 32227272 32227428 -218460426 + L1M4 LINE L1 1145 1317 -5099 921 291 92 38 chr2 32227502 32228083 -218459771 + L1M4 LINE L1 1262 1810 -4797 1525 192 50 33 chr2 32228083 32228442 -218459412 + MLT1A1 LTR MaLR 1 365 0 921 291 92 38 chr2 32228442 32228760 -218459094 + L1M4 LINE L1 1810 2398 -4209 3327 216 86 18 chr2 32228777 32229151 -218458703 + L1M4 LINE L1 4458 4805 -1621 1336 245 35 30 chr2 32229151 32229522 -218458332 + MLT1A2 LTR MaLR 2 374 0 3327 216 86 18 chr2 32229522 32230226 -218457628 + L1M4 LINE L1 4805 5610 -816 3982 179 51 12 chr2 32230226 32231132 -218456722 + L1MA7 LINE L1 3387 4327 -1819 2250 112 0 10 chr2 32231134 32231446 -218456408 + AluSx SINE Alu 2 310 -2 630 267 155 0 chr2 32231452 32231658 -218456196 + MLT1G1 LTR MaLR 358 595 0 1844 199 72 33 chr2 32231661 32232303 -218455551 + L1ME2 LINE L1 5150 5819 -345 1897 167 3 19 chr2 32232303 32232620 -218455234 + AluSx SINE Alu 1 312 0 1844 199 72 33 chr2 32232620 32232651 -218455203 + L1ME2 LINE L1 5819 5847 -317 * 4971 174 16 7 chr2 32232640 32233980 -218453874 + L1MA7 LINE L1 4299 5650 -662 2140 140 28 8 chr2 32233980 32234337 -218453517 - THE1B LTR MaLR 0 364 1 5171 123 5 1 chr2 32234337 32235108 -218452746 - THE1B-int LTR MaLR 0 1580 807 2035 136 32 46 chr2 32235111 32235480 -218452374 + THE1B LTR MaLR 1 364 0 7526 165 50 65 chr2 32235482 32237157 -218450697 + THE1B-int LTR MaLR 3 1651 0 2172 128 36 28 chr2 32237160 32237519 -218450335 + THE1B LTR MaLR 3 364 0 4702 130 58 1 chr2 32237519 32238279 -218449575 - THE1B-int LTR MaLR -772 808 6 2196 152 22 0 chr2 32238284 32238640 -218449214 - THE1B LTR MaLR 0 364 1 3029 175 20 17 chr2 32238641 32239280 -218448574 + L1MA7 LINE L1 5647 6287 -4 1843 172 15 0 chr2 32239297 32239623 -218448231 + L1M4 LINE L1 5600 5930 -534 * 3718 112 5 1 chr2 32239615 32240410 -218447444 - L1P4 LINE L1 -381 5787 4990 2559 131 5 5 chr2 32240409 32240838 -218447016 + L1P LINE L1 3906 4334 -1812 * 525 93 27 0 chr2 32240846 32240921 -218446933 + Tigger1 DNA MER2_type 2341 2417 -1 28 0 0 0 chr2 32241104 32241132 -218446722 + AT_rich Low_complexity Low_complexity 1 28 0 322 113 0 16 chr2 32241132 32241194 -218446660 + L1MD2 LINE L1 6296 6356 -3 220 113 38 62 chr2 32241223 32241303 -218446551 + (TATAA)n Simple_repeat Simple_repeat 4 81 0 2467 201 39 15 chr2 32241332 32241919 -218445935 - L1MD1 LINE L1 0 6242 5642 276 30 0 0 chr2 32241923 32241956 -218445898 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1598 174 0 39 chr2 32241958 32242239 -218445615 - AluJo SINE Alu -31 281 12 3156 103 17 4 chr2 32242268 32242732 -218445122 - L1PA11 LINE L1 -2 6172 5703 6659 119 28 7 chr2 32242732 32243759 -218444095 - HSMAR1 DNA Mariner -232 1055 7 704 223 0 11 chr2 32243760 32243935 -218443919 - L1P3 LINE L1 -5003 1458 1286 7645 217 132 5 chr2 32243944 32244401 -218443453 - L1P LINE L1 -2028 4118 3720 1554 96 44 4 chr2 32244401 32244651 -218443203 - L1MA2 LINE L1 0 6304 6045 7645 217 132 5 chr2 32244651 32244676 -218443178 - L1P LINE L1 -2426 3720 3700 15701 69 3 1 chr2 32244676 32247522 -218440332 - L1PA6 LINE L1 -5 6149 3296 7645 217 132 5 chr2 32247522 32247741 -218440113 - L1P LINE L1 -2446 3700 3510 216 0 0 0 chr2 32247741 32247765 -218440089 + (TG)n Simple_repeat Simple_repeat 2 25 0 7645 217 132 5 chr2 32247765 32249289 -218438565 - L1P LINE L1 -2636 3510 1609 1512 93 98 0 chr2 32249461 32249686 -218438168 + LTR17 LTR ERV1 534 780 0 5344 75 0 17 chr2 32249686 32250405 -218437449 + HERV17 LTR ERV1 1 707 -7919 9092 70 9 8 chr2 32250581 32251844 -218436010 + HERV17 LTR ERV1 750 2014 -6612 * 10258 57 2 1 chr2 32251829 32253153 -218434701 + HERV17 LTR ERV1 2430 3754 -4872 4771 49 5 2 chr2 32253132 32253745 -218434109 + HERV17 LTR ERV1 5405 6019 -2607 * 2342 62 3 0 chr2 32253763 32254054 -218433800 + HERV17 LTR ERV1 8335 8626 0 2336 59 0 98 chr2 32254058 32254209 -218433645 + LTR17 LTR ERV1 5 103 -677 428 19 0 0 chr2 32254209 32254261 -218433593 + L1PA6 LINE L1 6098 6149 -5 2336 59 0 98 chr2 32254261 32254466 -218433388 + LTR17 LTR ERV1 103 326 -454 797 281 37 39 chr2 32254467 32254848 -218433006 + L1ME2 LINE L1 1022 1401 -5025 357 183 10 7 chr2 32254873 32254971 -218432883 - L1MB3 LINE L1 0 6180 6086 6317 197 43 87 chr2 32254976 32257658 -218430196 - L1MA4 LINE L1 -280 6202 3403 924 237 82 109 chr2 32257658 32258085 -218429769 + MER66A LTR ERV1 93 468 -10 6317 197 43 87 chr2 32258085 32261511 -218426343 - L1MA4 LINE L1 -3079 3403 5 724 291 93 0 chr2 32261532 32261834 -218426020 + L1ME2 LINE L1 1639 1968 -4639 755 224 18 14 chr2 32261863 32262082 -218425772 + L1ME2 LINE L1 4009 4228 -2198 1883 231 30 8 chr2 32262102 32262635 -218425219 + L1ME2 LINE L1 4809 5353 -1073 1760 226 41 37 chr2 32262645 32263492 -218424362 + L1ME2 LINE L1 5516 6434 -10 1978 225 85 52 chr2 32263513 32264705 -218423149 + L1MC4 LINE L1 6374 7700 -342 1613 145 128 0 chr2 32264705 32265001 -218422853 - MER1B DNA MER1_type -3 334 1 1978 225 85 52 chr2 32265001 32265208 -218422646 + L1MC4 LINE L1 7700 7899 -143 1731 72 72 11 chr2 32265493 32265757 -218422097 + L1MA1 LINE L1 6023 6302 0 261 250 77 29 chr2 32265943 32266047 -218421807 + MIR SINE MIR 154 262 0 231 36 0 0 chr2 32266473 32266501 -218421353 + (CA)n Simple_repeat Simple_repeat 1 28 0 890 291 77 24 chr2 32266660 32266997 -218420857 - MLT1J LTR MaLR -154 357 3 240 35 0 0 chr2 32267131 32267160 -218420694 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1886 157 7 0 chr2 32267172 32267478 -218420376 + AluSx SINE Alu 1 308 0 499 211 0 0 chr2 32267582 32267672 -218420182 - MER5A DNA MER1_type -84 105 16 677 298 145 31 chr2 32267962 32268418 -218419436 - L1MC4a LINE L1 -94 6027 5520 22 0 0 0 chr2 32269751 32269773 -218418081 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 32269857 32269883 -218417971 + AT_rich Low_complexity Low_complexity 1 26 0 27 29 0 0 chr2 32270985 32271019 -218416835 + AT_rich Low_complexity Low_complexity 1 34 0 1656 166 53 0 chr2 32272279 32272563 -218415291 - AluJb SINE Alu -13 299 1 228 214 48 87 chr2 32272818 32272921 -218414933 + HAL1 LINE L1 980 1078 -1429 857 229 147 50 chr2 32273179 32273580 -218414274 + LTR50 LTR ERVL 100 539 -256 485 292 52 21 chr2 32273596 32273788 -218414066 + LTR50 LTR ERVL 475 672 -123 2308 91 3 0 chr2 32273969 32274266 -218413588 - AluSq SINE Alu -15 298 1 29 28 0 0 chr2 32274918 32274954 -218412900 + AT_rich Low_complexity Low_complexity 1 36 0 2211 118 3 6 chr2 32275394 32275708 -218412146 - AluSq SINE Alu 0 313 1 463 299 15 8 chr2 32276578 32276712 -218411142 + L2 LINE L2 2004 2138 -1176 838 236 66 43 chr2 32276716 32277121 -218410733 + MLT1A1 LTR MaLR 10 362 -3 1917 218 31 56 chr2 32277124 32277643 -218410211 + L1MC3 LINE L1 7279 7784 -1 703 201 67 12 chr2 32277702 32277866 -218409988 - FRAM SINE Alu -7 169 1 8375 193 35 4 chr2 32278393 32280136 -218407718 + L1P LINE L1 2840 4636 -1510 517 261 85 46 chr2 32280160 32280420 -218407434 - L1MEc LINE L1 -5141 1255 986 1462 238 5 57 chr2 32280478 32280759 -218407095 + L1MC1 LINE L1 5407 5658 -2150 1587 121 12 8 chr2 32280759 32281007 -218406847 + L1MC1 LINE L1 6071 6319 -14 1462 238 5 57 chr2 32281007 32281162 -218406692 + L1MC1 LINE L1 5658 5820 -1988 735 218 29 12 chr2 32281162 32281332 -218406522 - HERVL40 LTR ERVL -2142 3388 3216 * 1465 238 47 31 chr2 32281305 32281688 -218406166 - HERVL40 LTR ERVL -2449 3081 2693 993 192 47 19 chr2 32281688 32281902 -218405952 - LTR40a LTR ERVL -293 226 7 706 283 83 21 chr2 32281907 32282575 -218405279 - L1M4c LINE L1 -4940 2198 1317 1592 184 54 4 chr2 32282634 32282911 -218404943 - AluJb SINE Alu -19 293 3 1279 212 128 43 chr2 32283305 32283938 -218403916 + Zaphod DNA AcHobo 284 970 -3061 7053 31 0 0 chr2 32283938 32284776 -218403078 + L1PA4 LINE L1 5318 6155 0 1088 209 58 4 chr2 32284814 32285091 -218402763 + Zaphod DNA AcHobo 3595 3886 -145 1549 218 47 67 chr2 32285093 32285689 -218402165 + MER82 DNA MER2_type 2 653 0 568 203 20 59 chr2 32285689 32285720 -218402134 + MER115 DNA AcHobo 548 579 -114 1665 201 13 0 chr2 32285720 32286028 -218401826 + AluJb SINE Alu 1 312 0 568 203 20 59 chr2 32286028 32286148 -218401706 + MER115 DNA AcHobo 579 693 0 22 35 0 0 chr2 32287089 32287118 -218400736 + AT_rich Low_complexity Low_complexity 1 29 0 2522 89 65 8 chr2 32287685 32288057 -218399797 + MLT2A1 LTR ERVL 1 393 -51 14473 203 35 21 chr2 32289417 32297048 -218390806 - L1PB3 LINE L1 -2 6868 70 * 34503 104 28 9 chr2 32297033 32299944 -218387910 - L1P LINE L1 -823 5323 2269 210 37 0 0 chr2 32299944 32299971 -218387883 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 34503 104 28 9 chr2 32299971 32302274 -218385580 - L1P LINE L1 -3877 2269 11 3343 147 28 7 chr2 32302282 32302887 -218384967 + L1MA8 LINE L1 5671 6288 -3 21 0 0 0 chr2 32302898 32302919 -218384935 + AT_rich Low_complexity Low_complexity 1 21 0 347 297 55 52 chr2 32303518 32303956 -218383898 - L1MC5 LINE L1 0 8042 7504 451 253 55 33 chr2 32304108 32304290 -218383564 - L1MC4 LINE L1 -547 7495 7310 310 317 29 0 chr2 32304403 32304507 -218383347 - L1MC5 LINE L1 -864 7097 6991 859 221 11 0 chr2 32304587 32304807 -218383047 - L1MC4 LINE L1 -854 7002 6733 231 100 50 0 chr2 32304807 32304847 -218383007 + Tigger2 DNA MER2_type 718 759 -1959 1576 166 8 0 chr2 32304897 32305156 -218382698 + Tigger2 DNA MER2_type 2458 2718 0 209 108 27 0 chr2 32305180 32305217 -218382637 + (TG)n Simple_repeat Simple_repeat 2 39 0 1974 148 25 22 chr2 32305221 32305580 -218382274 - Tigger6a DNA MER2_type -3 1080 721 2038 180 48 137 chr2 32305585 32306257 -218381597 - LTR9 LTR ERV1 0 612 1 1599 170 14 14 chr2 32306259 32306542 -218381312 - HUERS-P3 LTR ERV1 0 8919 8299 14472 127 3 14 chr2 32306736 32308507 -218379347 - HUERS-P3 LTR ERV1 -2007 6912 5165 2517 33 40 0 chr2 32308507 32308806 -218379048 - AluY SINE Alu 0 311 1 14472 127 3 14 chr2 32308806 32309121 -218378733 - HUERS-P3 LTR ERV1 -3754 5165 4848 * 19974 126 4 7 chr2 32309104 32311930 -218375924 - HUERS-P3 LTR ERV1 -4313 4606 1791 4409 194 53 9 chr2 32311927 32312979 -218374875 - HUERS-P3 LTR ERV1 -7267 1652 473 * 592 247 105 27 chr2 32312993 32313212 -218374642 - LTR19C LTR ERV1 -53 726 491 * 1618 208 7 85 chr2 32313195 32313619 -218374235 - LTR9 LTR ERV1 -221 391 1 2504 175 97 6 chr2 32313628 32314102 -218373752 - Tigger6a DNA MER2_type -566 517 1 2853 269 14 38 chr2 32315612 32316095 -218371759 + L1M3b LINE L1 10 470 -5811 2699 40 0 0 chr2 32316095 32316396 -218371458 - AluY SINE Alu -10 301 1 2853 269 14 38 chr2 32316396 32316682 -218371172 + L1M3b LINE L1 470 761 -5520 * 9765 221 44 27 chr2 32316668 32319132 -218368722 + L1M3b LINE L1 630 3049 -3301 2040 122 3 33 chr2 32319132 32319436 -218368418 + AluSq SINE Alu 1 295 -18 9765 221 44 27 chr2 32319436 32320876 -218366978 + L1M3b LINE L1 3049 4294 -2056 3048 134 9 0 chr2 32320876 32321300 -218366554 + MSTA LTR MaLR 1 428 0 9765 221 44 27 chr2 32321300 32321425 -218366429 + L1M3b LINE L1 4294 4415 -1935 195 258 61 30 chr2 32322409 32322475 -218365379 - L2 LINE L2 -44 3269 3202 401 336 7 7 chr2 32323242 32323379 -218364475 + MIR3 SINE MIR 10 146 -62 399 315 51 17 chr2 32323457 32323635 -218364219 + MIR SINE MIR 57 240 -22 231 311 66 28 chr2 32323847 32323953 -218363901 - MER5A DNA MER1_type -22 167 58 691 266 133 4 chr2 32325396 32325435 -218362419 - LTR16B LTR ERVL -9 455 422 2209 122 0 0 chr2 32325435 32325730 -218362124 + AluSx SINE Alu 1 295 -17 691 266 133 4 chr2 32325730 32325953 -218361901 - LTR16B LTR ERVL -42 422 159 461 238 0 16 chr2 32327755 32327881 -218359973 - L1M4 LINE L1 -1559 4587 4464 * 466 285 28 16 chr2 32327849 32328065 -218359789 + L1ME3A LINE L1 5669 5883 -285 21889 152 32 14 chr2 32328844 32329248 -218358606 + L1M1 LINE L1 16 411 -7154 2271 23 27 8 chr2 32329248 32329509 -218358345 - L1PA5 LINE L1 0 6154 5889 21889 152 32 14 chr2 32329509 32332529 -218355325 + L1M1 LINE L1 411 3523 -4042 405 0 0 0 chr2 32332529 32332574 -218355280 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 21889 152 32 14 chr2 32332574 32333098 -218354756 + L1M1 LINE L1 3523 4036 -3529 9434 188 19 20 chr2 32333100 32334495 -218353359 + L1 LINE L1 3790 5186 -2379 2191 83 0 10 chr2 32334495 32334783 -218353071 + AluY SINE Alu 26 310 -1 9434 188 19 20 chr2 32334783 32335343 -218352511 + L1 LINE L1 5186 5745 -1820 1686 166 0 28 chr2 32335343 32335660 -218352194 + AluJb SINE Alu 1 309 0 9434 188 19 20 chr2 32335660 32335700 -218352154 + L1 LINE L1 5745 5784 -1781 23320 164 21 19 chr2 32335704 32341953 -218345901 + L1PA8 LINE L1 1 7606 -4 295 160 40 0 chr2 32341954 32342004 -218345850 + LTR8 LTR ERV1 533 584 -107 27 73 0 0 chr2 32342004 32342059 -218345795 + AT_rich Low_complexity Low_complexity 1 55 0 189 171 0 0 chr2 32342968 32343003 -218344851 + A-rich Low_complexity Low_complexity 1 35 0 2190 84 7 29 chr2 32343081 32343389 -218344465 + AluY SINE Alu 1 301 -10 410 229 57 0 chr2 32343390 32343512 -218344342 + L1ME4a LINE L1 5756 5884 -237 492 239 11 51 chr2 32343534 32343710 -218344144 + L1MC5 LINE L1 7745 7913 -48 2122 138 24 6 chr2 32343712 32344046 -218343808 + L1PA16 LINE L1 5818 6157 -9 619 261 11 43 chr2 32344479 32344663 -218343191 - MER5B DNA MER1_type 0 178 1 576 206 7 85 chr2 32344682 32344823 -218343031 - MER5B DNA MER1_type 0 178 49 1418 159 58 11 chr2 32345172 32345448 -218342406 + L1MB3 LINE L1 5892 6180 -3 382 298 32 32 chr2 32345981 32346105 -218341749 - MER5A DNA MER1_type 0 189 66 271 341 29 14 chr2 32346009 32346147 -218341707 + MER5A DNA MER1_type 39 178 -11 * 9826 193 57 41 chr2 32346327 32346996 -218340858 + L1MA4 LINE L1 16 673 -6892 396 0 0 0 chr2 32346996 32347040 -218340814 + (CAGTG)n Simple_repeat Simple_repeat 3 46 0 9826 193 57 41 chr2 32347040 32347460 -218340394 + L1MA4 LINE L1 673 1085 -6480 2233 139 30 38 chr2 32347460 32347827 -218340027 - THE1B LTR MaLR 0 364 1 9826 193 57 41 chr2 32347827 32349632 -218338222 + L1MA4 LINE L1 1085 3634 -3931 764 163 30 22 chr2 32349635 32349770 -218338084 + FLAM_C SINE Alu 8 143 0 411 87 22 33 chr2 32349775 32349867 -218337987 + (TA)n Simple_repeat Simple_repeat 1 91 0 5652 197 45 14 chr2 32349867 32351197 -218336657 + L1MA4 LINE L1 3628 4999 -2566 1442 135 12 18 chr2 32351179 32351505 -218336349 + L1MA4 LINE L1 6593 6915 -743 * 3707 30 0 0 chr2 32351505 32351930 -218335924 + L1PA5 LINE L1 5734 6164 0 5284 135 12 4 chr2 32351933 32352748 -218335106 + L1MA4 LINE L1 6892 7713 -6 588 193 207 7 chr2 32352787 32352932 -218334922 + MER5A DNA MER1_type 16 189 0 184 240 20 100 chr2 32352939 32353039 -218334815 - MER5A DNA MER1_type -1 188 97 582 311 70 20 chr2 32353677 32353921 -218333933 - MIR SINE MIR -5 257 2 740 256 51 19 chr2 32355311 32355526 -218332328 + MIR SINE MIR 7 228 -34 183 346 0 0 chr2 32355639 32355691 -218332163 - MER5A DNA MER1_type -115 74 23 405 0 0 0 chr2 32355986 32356031 -218331823 + (CA)n Simple_repeat Simple_repeat 2 46 0 566 250 22 17 chr2 32356791 32356959 -218330895 + MIR SINE MIR 5 176 -32 587 290 157 69 chr2 32357544 32358023 -218329831 - LTR33 LTR ERVL 0 521 1 648 322 83 33 chr2 32358138 32358272 -218329582 - ERVL LTR ERVL -2323 3331 3205 24869 45 4 0 chr2 32358272 32362163 -218325691 - L1PA5 LINE L1 -1 6153 2250 648 322 83 33 chr2 32362163 32362753 -218325101 - ERVL LTR ERVL -2449 3205 2506 827 322 45 20 chr2 32362790 32362948 -218324906 - ERVL LTR ERVL -3424 2269 2116 2046 201 65 92 chr2 32362948 32363591 -218324263 + MLT1E2 LTR MaLR 1 626 0 827 322 45 20 chr2 32363591 32363889 -218323965 - ERVL LTR ERVL -3577 2116 1744 881 124 20 13 chr2 32363988 32364141 -218323713 - MLT1D LTR MaLR 0 505 352 268 286 48 0 chr2 32364389 32364515 -218323339 - ERVL LTR ERVL -5061 593 462 1285 70 0 0 chr2 32364607 32364790 -218323064 - AluY SINE Alu 0 313 131 216 0 0 0 chr2 32364792 32364816 -218323038 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2004 61 0 4 chr2 32364816 32365062 -218322792 - AluY SINE Alu -28 283 39 396 0 0 0 chr2 32366033 32366077 -218321777 + (TG)n Simple_repeat Simple_repeat 2 45 0 335 315 63 8 chr2 32366136 32366263 -218321591 + MLT1I LTR MaLR 36 169 -240 232 200 43 0 chr2 32366393 32366463 -218321391 + MLT1J1 LTR MaLR 347 419 -27 1201 87 6 0 chr2 32366463 32366636 -218321218 + L1MA2 LINE L1 5437 5610 -695 * 11934 88 3 1 chr2 32366634 32368330 -218319524 + L1PA5 LINE L1 1 1701 -4440 19710 40 5 0 chr2 32368330 32371584 -218316270 + L1PA5 LINE L1 2902 6153 -1 584 122 139 0 chr2 32371584 32371699 -218316155 + L1PB4 LINE L1 6025 6155 -1 * 2780 125 11 2 chr2 32371693 32372148 -218315706 + L1MA2 LINE L1 5593 6051 -253 10193 141 16 27 chr2 32372162 32374967 -218312887 + L1P3 LINE L1 6 2801 -3660 5642 110 15 16 chr2 32374966 32375897 -218311957 - L1P LINE L1 -3043 3103 2174 * 1943 116 29 3 chr2 32375896 32376206 -218311648 + MSTA-int LTR MaLR 1334 1651 0 * 1990 144 160 5 chr2 32376206 32376574 -218311280 + MSTA LTR MaLR 1 425 -3 186 348 28 43 chr2 32376602 32376743 -218311111 - L2 LINE L2 -303 2969 2831 2416 97 35 0 chr2 32376790 32377160 -218310694 + L1MA2 LINE L1 5919 6301 -3 216 260 39 26 chr2 32377519 32377596 -218310258 - MIR3 SINE MIR -13 195 118 237 188 29 0 chr2 32378178 32378247 -218309607 - MER69 DNA AcHobo -58 2468 2398 684 206 23 0 chr2 32378249 32378380 -218309474 + FLAM_C SINE Alu 1 134 -9 734 250 56 51 chr2 32378457 32378878 -218308976 - L1MEc LINE L1 -3714 2523 2120 430 261 9 0 chr2 32378974 32379089 -218308765 - L1M4 LINE L1 -1981 4165 4050 2138 108 7 24 chr2 32379197 32379494 -218308360 - AluSx SINE Alu -20 292 1 911 200 19 29 chr2 32379762 32379967 -218307887 - MLT1A2 LTR MaLR 0 374 172 * 1764 133 7 7 chr2 32379957 32380236 -218307618 + MSTA LTR MaLR 150 428 0 359 132 0 110 chr2 32380237 32380328 -218307526 - MLT1A2 LTR MaLR -293 81 1 982 232 61 67 chr2 32380904 32381429 -218306425 + L1MC5 LINE L1 7173 7694 -267 298 226 21 21 chr2 32381441 32381534 -218306320 + (TA)n Simple_repeat Simple_repeat 2 94 0 331 303 121 0 chr2 32381646 32381778 -218306076 - L2 LINE L2 -639 2675 2528 406 277 15 46 chr2 32383057 32383187 -218304667 - MIR SINE MIR -70 192 67 750 260 41 58 chr2 32383734 32383976 -218303878 + MIR SINE MIR 20 257 -5 2369 106 0 0 chr2 32384864 32385165 -218302689 + AluSx SINE Alu 4 304 -8 192 152 0 0 chr2 32385318 32385351 -218302503 + C-rich Low_complexity Low_complexity 6 38 0 542 195 176 34 chr2 32385374 32385641 -218302213 - MER69 DNA AcHobo -13 2513 2209 606 180 0 0 chr2 32385726 32385848 -218302006 + LTR37A LTR ERV1 301 422 -4 534 171 189 0 chr2 32386187 32386298 -218301556 - FLAM_A SINE Alu -1 132 1 1956 138 3 0 chr2 32386722 32387004 -218300850 + AluSx SINE Alu 28 310 -2 709 231 25 66 chr2 32387130 32387372 -218300482 + MER31-int LTR ERV1 3852 4083 -853 2138 109 34 0 chr2 32387372 32387665 -218300189 + AluSq SINE Alu 1 303 -10 421 231 116 0 chr2 32387962 32388109 -218299745 + LTR37A LTR ERV1 38 201 -225 335 325 34 12 chr2 32388152 32388472 -218299382 - L1M4 LINE L1 -1451 4695 4369 21 71 0 0 chr2 32388714 32388756 -218299098 + AT_rich Low_complexity Low_complexity 1 42 0 689 173 0 9 chr2 32388876 32389051 -218298803 - MER89 LTR ERV1 0 559 334 389 200 129 86 chr2 32389039 32389179 -218298675 - MLT1C LTR MaLR -321 146 1 * 364 200 32 0 chr2 32389180 32389275 -218298579 + L1MB8 LINE L1 6079 6176 -2 198 71 0 0 chr2 32389686 32389714 -218298140 + (CTA)n Simple_repeat Simple_repeat 1 28 0 1049 218 32 9 chr2 32390432 32390772 -218297082 + L1MEc LINE L1 2047 2394 -4002 24 53 0 0 chr2 32390779 32390817 -218297037 + AT_rich Low_complexity Low_complexity 1 38 0 2153 157 3 3 chr2 32390832 32391189 -218296665 - MLT2C1 LTR ERVL -40 357 1 4244 237 49 22 chr2 32391200 32391715 -218296139 + L1MEc LINE L1 2374 2873 -3342 1960 162 0 7 chr2 32391715 32392018 -218295836 + AluJb SINE Alu 1 301 -11 4244 237 49 22 chr2 32392018 32393024 -218294830 + L1MEc LINE L1 2873 3937 -2278 1996 175 37 30 chr2 32393025 32393573 -218294281 + MLT2A2 LTR ERVL 1 554 0 2799 208 77 32 chr2 32393583 32394501 -218293353 + L1MEc LINE L1 3944 4903 -1312 961 252 189 45 chr2 32394556 32394980 -218292874 + L2 LINE L2 2824 3308 -5 230 270 87 35 chr2 32395038 32395153 -218292701 - L2 LINE L2 -9 3304 3184 1682 129 13 41 chr2 32395320 32395637 -218292217 + L1MCa LINE L1 37 344 -6082 7808 187 26 22 chr2 32395641 32397250 -218290604 + L1PA13 LINE L1 1 1615 -5172 1553 143 0 0 chr2 32397250 32397523 -218290331 + L1P LINE L1 4623 4895 -1251 * 17701 175 15 17 chr2 32397521 32397880 -218289974 + L1PA13 LINE L1 2122 2480 -4334 2290 122 0 0 chr2 32397880 32398191 -218289663 + AluSx SINE Alu 1 311 -1 17701 175 15 17 chr2 32398191 32401190 -218286664 + L1PA13 LINE L1 2480 5482 -1332 4643 171 51 46 chr2 32401190 32402256 -218285598 + MER11C LTR ERVK 1 1071 0 17701 175 15 17 chr2 32402256 32402732 -218285122 + L1PA13 LINE L1 5482 5957 -857 1886 174 0 3 chr2 32402732 32403037 -218284817 + AluJb SINE Alu 1 304 -8 17701 175 15 17 chr2 32403037 32403879 -218283975 + L1PA13 LINE L1 5957 6803 -11 886 190 150 46 chr2 32403925 32404161 -218283693 + MER21B LTR ERV1 23 271 -475 823 276 40 12 chr2 32404151 32404401 -218283453 + MER21B LTR ERV1 493 749 -114 * 237 241 0 0 chr2 32404478 32404536 -218283318 + L1MCa LINE L1 360 417 -6009 695 190 0 0 chr2 32404815 32404936 -218282918 + Tigger5 DNA MER2_type 2200 2320 -3 3254 211 27 8 chr2 32404945 32406268 -218281586 + L1MCa LINE L1 2057 3406 -3020 651 117 0 0 chr2 32406268 32406371 -218281483 + (GGAA)n Simple_repeat Simple_repeat 1 103 0 782 288 105 38 chr2 32406655 32407075 -218280779 - MLT1J2 LTR MaLR 0 450 3 976 172 17 0 chr2 32407352 32407526 -218280328 + L1MD3 LINE L1 7501 7677 -318 6238 153 5 20 chr2 32407527 32408337 -218279517 + L1MA9 LINE L1 4217 5037 -1275 1926 163 7 0 chr2 32408337 32408637 -218279217 + AluSx SINE Alu 1 302 -10 6238 153 5 20 chr2 32408637 32409092 -218278762 + L1MA9 LINE L1 5037 5945 -367 653 158 18 35 chr2 32409095 32409209 -218278645 + FLAM_C SINE Alu 7 118 -25 4891 98 30 6 chr2 32409218 32409931 -218277923 + L1MA2 LINE L1 5428 6157 -147 325 114 0 0 chr2 32409932 32409976 -218277878 + Alu SINE Alu 1 44 -258 1278 150 5 5 chr2 32409976 32410169 -218277685 + AluSg/x SINE Alu 91 283 -27 903 136 74 0 chr2 32410171 32410333 -218277521 + L1MA3 LINE L1 6130 6303 -2 1167 170 170 7 chr2 32410409 32410691 -218277163 + L1MA8 LINE L1 5896 6223 -68 979 126 7 13 chr2 32410919 32411102 -218276752 - AluJb SINE Alu 0 315 134 525 261 129 60 chr2 32411890 32412238 -218275616 - MLT1I LTR MaLR -13 396 25 379 230 50 10 chr2 32412678 32412778 -218275076 - MLT1G1 LTR MaLR 0 595 492 * 1995 225 22 5 chr2 32412776 32413176 -218274678 + MER45B DNA AcHobo 240 646 -394 1958 100 74 0 chr2 32413176 32413446 -218274408 + AluSg SINE Alu 1 290 -20 42033 60 8 1 chr2 32413447 32419536 -218268318 + L1PA5 LINE L1 12 6141 -13 186 43 0 0 chr2 32419539 32419562 -218268292 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 2069 122 3 29 chr2 32419575 32419887 -218267967 + AluSx SINE Alu 1 304 -8 1857 198 23 8 chr2 32419887 32420282 -218267572 + MER45B DNA AcHobo 639 1039 -1 225 303 17 79 chr2 32420283 32420461 -218267393 + MLT1L LTR MaLR 11 177 -438 401 277 185 15 chr2 32420474 32420669 -218267185 + L2 LINE L2 3086 3313 0 951 246 156 60 chr2 32420675 32421073 -218266781 + MLT1L LTR MaLR 172 607 -8 2042 100 26 26 chr2 32421115 32421424 -218266430 + AluSx SINE Alu 1 309 -3 1685 113 52 0 chr2 32421424 32421653 -218266201 + AluSx SINE Alu 1 241 -71 3640 111 168 142 chr2 32421653 32422958 -218264896 + pTR5 LTR ERV1 750 2407 -31 273 100 62 62 chr2 32422958 32423038 -218264816 + Alu SINE Alu 221 300 0 246 203 14 68 chr2 32423325 32423399 -218264455 - MLT1J LTR MaLR -320 191 122 750 203 61 7 chr2 32423441 32423589 -218264265 + MLT1C LTR MaLR 305 460 -7 840 206 0 0 chr2 32423828 32424163 -218263691 + (TG)n Simple_repeat Simple_repeat 1 335 0 22 0 0 0 chr2 32424470 32424492 -218263362 + AT_rich Low_complexity Low_complexity 1 22 0 437 251 73 26 chr2 32424572 32424763 -218263091 - L1MC4a LINE L1 -1818 5990 5791 355 300 113 23 chr2 32424853 32425110 -218262744 - L1MC4a LINE L1 -864 5282 5003 523 203 8 17 chr2 32425112 32425230 -218262624 - L1MC4a LINE L1 -1199 4947 4831 4616 52 0 2 chr2 32425231 32425768 -218262086 + L1PA5 LINE L1 5616 6151 -3 4982 196 56 35 chr2 32425950 32427162 -218260692 - L1MC4a LINE L1 -1326 4820 3584 906 162 0 0 chr2 32427291 32427427 -218260427 + AluSq/x SINE Alu 1 136 -176 1779 118 10 78 chr2 32427427 32427767 -218260087 + AluSx SINE Alu 1 319 0 308 301 43 0 chr2 32428165 32428258 -218259596 - MIR SINE MIR -54 208 112 638 211 155 12 chr2 32428266 32428427 -218259427 + MER5A DNA MER1_type 4 187 -2 2051 108 13 33 chr2 32429005 32429312 -218258542 + AluSq SINE Alu 1 301 -12 372 273 120 53 chr2 32430041 32430191 -218257663 + MIR SINE MIR 75 234 -28 291 313 81 6 chr2 32430793 32430953 -218256901 - MIR SINE MIR -44 218 47 2885 202 82 83 chr2 32431143 32431970 -218255884 - LTR1B LTR ERV1 0 826 1 2313 104 0 7 chr2 32432553 32432862 -218254992 - AluSc SINE Alu -2 307 1 2074 128 3 0 chr2 32433890 32434180 -218253674 + AluSp SINE Alu 1 291 -22 219 111 44 0 chr2 32434180 32434225 -218253629 + (TA)n Simple_repeat Simple_repeat 2 48 0 214 304 0 14 chr2 32434730 32434799 -218253055 + GA-rich Low_complexity Low_complexity 2 69 0 195 301 60 0 chr2 32434802 32434885 -218252969 + L2 LINE L2 2230 2317 -997 1468 214 38 99 chr2 32434930 32435487 -218252367 - L1ME1 LINE L1 -4 6162 5640 5193 150 16 4 chr2 32435501 32436684 -218251170 - L1MA2 LINE L1 -216 6088 4920 2444 157 28 39 chr2 32436684 32436725 -218251129 - MSTA LTR MaLR 0 428 388 2439 94 0 0 chr2 32436725 32437032 -218250822 + AluSc SINE Alu 1 307 -2 2474 88 0 0 chr2 32437032 32437339 -218250515 + AluY SINE Alu 1 307 -4 2444 157 28 39 chr2 32437339 32437729 -218250125 - MSTA LTR MaLR -38 390 1 6127 173 38 6 chr2 32437729 32438797 -218249057 - MSTA-int LTR MaLR 0 1651 550 5193 150 16 4 chr2 32437729 32437740 -218250114 - L1MA2 LINE L1 -1384 4920 4882 * 592 98 11 11 chr2 32438785 32438877 -218248977 - MSTA-int LTR MaLR -1559 92 1 1955 154 31 9 chr2 32438877 32439202 -218248652 - MSTA LTR MaLR 0 428 97 3020 166 36 2 chr2 32439202 32439761 -218248093 - L1MA2 LINE L1 -2094 4052 3475 2425 112 48 11 chr2 32439738 32440112 -218247742 - L1PA11 LINE L1 0 6174 5787 * 2666 185 9 6 chr2 32440105 32440641 -218247213 - L1 LINE L1 -2492 5073 4536 2102 211 42 8 chr2 32441938 32442411 -218245443 - L1 LINE L1 -3286 4279 3791 8092 26 14 0 chr2 32442411 32443455 -218244399 - L1PA4 LINE L1 -5 6150 5103 7696 33 1 0 chr2 32443455 32444358 -218243496 + L1PA4 LINE L1 4194 5097 -1049 * 11212 167 61 64 chr2 32444348 32445013 -218242841 - L1 LINE L1 -3757 3808 3142 2411 85 0 7 chr2 32445013 32445319 -218242535 + AluY SINE Alu 1 304 -7 11212 167 61 64 chr2 32445319 32448106 -218239748 - L1 LINE L1 -4423 3142 25 4073 191 41 44 chr2 32448111 32448605 -218239249 - L1ME LINE L1 -562 5604 5110 2019 142 7 0 chr2 32448605 32448894 -218238960 - AluSx SINE Alu -21 291 1 4073 191 41 44 chr2 32448894 32449670 -218238184 - L1ME LINE L1 -1056 5110 4323 22 0 0 0 chr2 32449707 32449729 -218238125 + AT_rich Low_complexity Low_complexity 1 22 0 855 213 240 14 chr2 32449878 32450174 -218237680 - MLT1A1 LTR MaLR 0 365 3 902 164 7 7 chr2 32450878 32451024 -218236830 - FRAM SINE Alu -25 151 6 704 167 0 9 chr2 32451372 32451480 -218236374 + AluJo SINE Alu 87 193 -119 393 75 0 0 chr2 32451480 32451533 -218236321 + (GA)n Simple_repeat Simple_repeat 2 54 0 302 263 76 0 chr2 32451536 32451654 -218236200 - MIR3 SINE MIR -75 133 7 343 240 0 13 chr2 32451661 32451736 -218236118 + MER112 DNA MER1_type 1 74 -186 252 0 0 0 chr2 32451737 32451765 -218236089 + (CA)n Simple_repeat Simple_repeat 1 28 0 728 196 143 0 chr2 32451832 32452021 -218235833 - MIR SINE MIR -46 216 1 7348 64 35 0 chr2 32452492 32453413 -218234441 - L1PA7 LINE L1 -2 6152 5227 25 90 0 0 chr2 32453578 32453645 -218234209 + AT_rich Low_complexity Low_complexity 1 67 0 2292 136 23 6 chr2 32453817 32454170 -218233684 - MER46B DNA MER2_type -1 235 2 2109 134 13 19 chr2 32454582 32454895 -218232959 + AluSx SINE Alu 1 311 -1 196 211 0 0 chr2 32455214 32455252 -218232602 - MIR SINE MIR -176 86 49 2417 106 3 0 chr2 32455650 32455962 -218231892 - AluSp SINE Alu 0 313 1 458 308 93 30 chr2 32455995 32456232 -218231622 - MIR SINE MIR 0 262 11 2143 126 7 7 chr2 32456361 32456671 -218231183 + AluSx SINE Alu 3 312 0 2454 67 6 22 chr2 32456985 32457300 -218230554 - AluY SINE Alu -1 310 1 1994 148 13 0 chr2 32457584 32457882 -218229972 - AluSx SINE Alu -10 302 1 1942 127 58 0 chr2 32458142 32458433 -218229421 + AluSx SINE Alu 1 308 -4 2286 104 0 0 chr2 32458457 32458756 -218229098 - AluY SINE Alu -12 299 1 256 270 32 0 chr2 32458941 32459004 -218228850 - MIR SINE MIR -108 154 90 270 264 114 29 chr2 32459562 32459702 -218228152 - MER5B DNA MER1_type 0 178 27 238 333 65 9 chr2 32459609 32459717 -218228137 + MER5A DNA MER1_type 70 183 -6 * 3132 37 0 3 chr2 32460104 32460482 -218227372 - L1PA3 LINE L1 0 6155 5779 2736 10 0 0 chr2 32460482 32460789 -218227065 + L1PA3 LINE L1 5470 5776 -379 187 197 30 91 chr2 32461427 32461493 -218226361 - MIR3 SINE MIR -23 185 124 2692 70 11 0 chr2 32461498 32461855 -218225999 + L1PA7 LINE L1 5793 6153 -1 276 258 164 51 chr2 32462049 32462305 -218225549 - L1ME4a LINE L1 -5 6116 5832 759 207 61 0 chr2 32462629 32462793 -218225061 + FRAM SINE Alu 1 174 -2 248 290 78 72 chr2 32462830 32463023 -218224831 - L3 LINE CR1 -576 1001 808 2310 221 130 11 chr2 32463424 32464205 -218223649 - L1ME1 LINE L1 -3 6232 5198 2087 123 10 0 chr2 32464205 32464506 -218223348 - AluSx SINE Alu -8 304 1 2310 221 130 11 chr2 32464506 32464693 -218223161 - L1ME1 LINE L1 -1037 5198 5035 1809 133 10 31 chr2 32465041 32465334 -218222520 + AluSx SINE Alu 1 287 -25 575 259 19 12 chr2 32465385 32465547 -218222307 - L1ME1 LINE L1 -1198 5017 4855 795 218 0 0 chr2 32465548 32465695 -218222159 - FRAM SINE Alu -13 163 17 533 201 125 86 chr2 32465705 32465811 -218222043 - L1ME1 LINE L1 -1342 4873 4773 1494 178 0 83 chr2 32465811 32466149 -218221705 + AluJo SINE Alu 1 310 -2 533 201 125 86 chr2 32466149 32466345 -218221509 - L1ME1 LINE L1 -1442 4773 4559 368 287 0 0 chr2 32466341 32466428 -218221426 - L1ME1 LINE L1 -2097 4118 4032 * 1358 246 161 24 chr2 32466419 32467090 -218220764 - L1ME1 LINE L1 -2421 3794 3032 1947 117 57 0 chr2 32467145 32467428 -218220426 + AluSx SINE Alu 1 299 -13 1393 191 50 0 chr2 32467440 32467702 -218220152 + AluJo SINE Alu 1 275 -37 1374 258 91 15 chr2 32467720 32468429 -218219425 - L1ME1 LINE L1 -3276 2939 2140 2158 60 57 7 chr2 32468452 32468733 -218219121 + AluSp SINE Alu 1 295 -18 1243 106 0 0 chr2 32468818 32468979 -218218875 + AluSc SINE Alu 1 161 -148 21 36 0 0 chr2 32469681 32469709 -218218145 + AT_rich Low_complexity Low_complexity 1 28 0 1657 132 60 0 chr2 32469840 32470106 -218217748 - AluSx SINE Alu -30 282 1 235 323 32 21 chr2 32470753 32470846 -218217008 + MIR SINE MIR 22 115 -147 255 184 112 31 chr2 32470851 32470949 -218216905 - L1M4 LINE L1 -923 5223 5118 320 240 6 43 chr2 32470977 32471069 -218216785 - MLT1E1 LTR MaLR -266 388 193 310 208 0 42 chr2 32471104 32471176 -218216678 - MLT1E1 LTR MaLR -511 82 14 302 268 0 0 chr2 32471367 32471438 -218216416 - MER116 DNA Mariner -2 78 8 240 336 144 16 chr2 32471580 32471705 -218216149 + MIR SINE MIR 48 188 -74 22 0 0 0 chr2 32471920 32471942 -218215912 + AT_rich Low_complexity Low_complexity 1 22 0 567 40 0 0 chr2 32472437 32472511 -218215343 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 674 175 33 0 chr2 32472512 32472632 -218215222 - FLAM_C SINE Alu -19 124 1 417 20 0 0 chr2 32475344 32475394 -218212460 + (CA)n Simple_repeat Simple_repeat 1 50 0 25 31 0 0 chr2 32475498 32475530 -218212324 + AT_rich Low_complexity Low_complexity 1 32 0 1705 123 63 18 chr2 32475897 32476181 -218211673 + AluSx SINE Alu 1 297 -15 238 233 133 22 chr2 32476533 32476623 -218211231 + MARNA DNA Mariner 309 408 -178 197 119 24 0 chr2 32476657 32476699 -218211155 + (TA)n Simple_repeat Simple_repeat 2 44 0 2073 115 18 0 chr2 32476756 32477034 -218210820 - AluSx SINE Alu -23 289 7 1749 139 21 7 chr2 32477922 32478202 -218209652 + AluSx SINE Alu 11 294 -18 207 417 0 0 chr2 32478202 32478310 -218209544 + MIR SINE MIR 40 147 -61 285 366 16 63 chr2 32478424 32478615 -218209239 - MIR3 SINE MIR -11 197 16 1651 150 10 70 chr2 32479056 32479369 -218208485 - AluJb SINE Alu -18 294 1 23 33 0 0 chr2 32479369 32479399 -218208455 + AT_rich Low_complexity Low_complexity 1 30 0 29 84 0 0 chr2 32479615 32479686 -218208168 + AT_rich Low_complexity Low_complexity 1 71 0 332 149 0 15 chr2 32480005 32480072 -218207782 + (CA)n Simple_repeat Simple_repeat 1 66 0 281 281 0 0 chr2 32480802 32480859 -218206995 - MER5A DNA MER1_type -130 59 3 485 118 0 0 chr2 32480939 32481007 -218206847 + AluJb SINE Alu 48 115 -197 333 237 18 25 chr2 32481043 32481161 -218206693 + GA-rich Low_complexity Low_complexity 1 118 -395 2144 91 0 4 chr2 32481161 32481437 -218206417 + AluSx SINE Alu 1 275 -37 333 237 18 25 chr2 32481437 32481560 -218206294 + GA-rich Low_complexity Low_complexity 118 513 0 307 373 86 4 chr2 32481601 32481845 -218206009 - L3 LINE CR1 -243 1334 1071 1061 223 23 0 chr2 32482609 32482824 -218205030 + MER58A DNA MER1_type 1 220 -4 386 335 116 6 chr2 32483423 32483596 -218204258 - MIR3 SINE MIR -1 207 16 517 215 46 39 chr2 32483657 32483787 -218204067 - FLAM_A SINE Alu -2 131 1 2790 7 0 0 chr2 32483921 32484229 -218203625 - AluYa5 SINE Alu -3 308 1 1792 216 99 43 chr2 32484281 32484907 -218202947 + L1ME4a LINE L1 5457 6117 -4 234 0 0 0 chr2 32485297 32485323 -218202531 + (T)n Simple_repeat Simple_repeat 1 26 0 24 53 0 0 chr2 32485774 32485812 -218202042 + AT_rich Low_complexity Low_complexity 1 38 0 207 186 0 0 chr2 32488064 32488107 -218199747 + A-rich Low_complexity Low_complexity 1 43 0 2129 125 0 3 chr2 32488698 32488987 -218198867 - AluSx SINE Alu -24 288 1 186 43 0 0 chr2 32489380 32489403 -218198451 + (TTTTTG)n Simple_repeat Simple_repeat 4 26 0 200 210 0 16 chr2 32489604 32489666 -218198188 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 2176 112 0 0 chr2 32489841 32490126 -218197728 + AluSx SINE Alu 1 285 -27 261 0 0 0 chr2 32490126 32490155 -218197699 + (CA)n Simple_repeat Simple_repeat 2 30 0 28 0 0 0 chr2 32492908 32492936 -218194918 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 32493183 32493214 -218194640 + AT_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr2 32493332 32493358 -218194496 + AT_rich Low_complexity Low_complexity 1 26 0 240 258 86 32 chr2 32493545 32493638 -218194216 + L2 LINE L2 2181 2278 -1036 736 305 98 38 chr2 32493647 32493795 -218194059 + L2 LINE L2 2496 2634 -679 2154 103 3 7 chr2 32493795 32494096 -218193758 - AluSx SINE Alu -12 300 1 736 305 98 38 chr2 32494096 32494700 -218193154 + L2 LINE L2 2634 3308 -5 723 289 67 63 chr2 32494701 32495161 -218192693 + L2 LINE L2 2285 2746 -568 504 224 182 42 chr2 32495223 32495415 -218192439 - L2 LINE L2 -3 3310 3092 294 246 178 0 chr2 32495424 32495542 -218192312 + MER20B DNA MER1_type 31 169 -614 1415 208 86 12 chr2 32495596 32496014 -218191840 + MER20B DNA MER1_type 259 707 -76 774 272 122 64 chr2 32496017 32496580 -218191274 - L2 LINE L2 -15 3298 2626 514 267 0 22 chr2 32496580 32496715 -218191139 - L2 LINE L2 -879 2435 2304 188 74 37 0 chr2 32497304 32497331 -218190523 + L2 LINE L2 1867 1894 -1420 1183 195 87 0 chr2 32497643 32497941 -218189913 - MER33 DNA MER1_type 0 324 1 303 360 101 7 chr2 32498150 32498289 -218189565 + L2 LINE L2 3109 3260 -12 359 343 37 0 chr2 32498720 32498854 -218189000 - MIR3 SINE MIR -7 201 63 21 0 0 0 chr2 32498903 32498924 -218188930 + AT_rich Low_complexity Low_complexity 1 21 0 1303 172 0 21 chr2 32498929 32499162 -218188692 + AluJb SINE Alu 84 311 -1 22 0 0 0 chr2 32499250 32499272 -218188582 + AT_rich Low_complexity Low_complexity 1 22 0 1934 154 0 16 chr2 32499317 32499629 -218188225 + AluJb SINE Alu 1 307 -5 1534 171 26 43 chr2 32499836 32499971 -218187883 + AluJo SINE Alu 2 138 -174 1786 145 3 3 chr2 32499971 32500279 -218187575 + AluJb SINE Alu 1 308 0 1534 171 26 43 chr2 32500279 32500447 -218187407 + AluJo SINE Alu 138 301 -11 22 0 0 0 chr2 32500730 32500752 -218187102 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 32501033 32501070 -218186784 + AT_rich Low_complexity Low_complexity 1 37 0 28 0 0 0 chr2 32502160 32502188 -218185666 + AT_rich Low_complexity Low_complexity 1 28 0 2311 112 0 0 chr2 32503225 32503529 -218184325 - AluSx SINE Alu -8 304 1 26 30 0 0 chr2 32504389 32504422 -218183432 + AT_rich Low_complexity Low_complexity 1 33 0 24 32 0 0 chr2 32504618 32504649 -218183205 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 32504735 32504756 -218183098 + AT_rich Low_complexity Low_complexity 1 21 0 218 217 133 12 chr2 32505563 32505646 -218182208 - MIR SINE MIR -44 218 126 510 231 128 0 chr2 32506291 32506408 -218181446 - FLAM_A SINE Alu 0 133 2 922 171 18 77 chr2 32508797 32509019 -218178835 - MER20B DNA MER1_type -2 217 9 229 194 0 75 chr2 32509113 32509180 -218178674 - 7SK RNA RNA -99 94 33 22 56 0 0 chr2 32511054 32511090 -218176764 + AT_rich Low_complexity Low_complexity 1 36 0 375 314 70 12 chr2 32511667 32511839 -218176015 + MIR SINE MIR 1 182 -80 245 302 59 20 chr2 32512177 32512274 -218175580 + L1MB7 LINE L1 27 119 -6423 186 43 0 0 chr2 32512274 32512297 -218175557 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 245 302 59 20 chr2 32512297 32512401 -218175453 + L1MB7 LINE L1 119 236 -6306 437 189 11 22 chr2 32512912 32513002 -218174852 - FLAM_A SINE Alu -13 129 41 241 349 0 12 chr2 32513006 32513092 -218174762 + L1MB7 LINE L1 792 876 -5666 1746 241 89 28 chr2 32513155 32513947 -218173907 + L1MB7 LINE L1 893 1723 -4881 2566 40 7 3 chr2 32513947 32514251 -218173603 - AluY SINE Alu -5 306 2 1746 241 89 28 chr2 32514251 32514305 -218173549 + L1MB7 LINE L1 1723 1772 -4832 1640 194 56 56 chr2 32514306 32514461 -218173393 + L1MB7 LINE L1 5399 5553 -1091 798 266 47 0 chr2 32514461 32514675 -218173179 - MER58A DNA MER1_type 0 224 1 1640 194 56 56 chr2 32514675 32515019 -218172835 + L1MB7 LINE L1 5552 5898 -746 * 14685 101 8 1 chr2 32515008 32517130 -218170724 - L1PA7 LINE L1 -1667 4479 2342 6978 60 6 3 chr2 32517130 32518804 -218169050 + L1PA7 LINE L1 4476 6154 0 2706 194 85 59 chr2 32518804 32519199 -218168655 + L1MB7 LINE L1 5885 6268 -414 2250 122 0 3 chr2 32519199 32519511 -218168343 + AluSx SINE Alu 1 311 -1 2706 194 85 59 chr2 32519511 32519734 -218168120 + L1MB7 LINE L1 6268 6484 -198 2234 111 0 7 chr2 32519734 32520031 -218167823 + AluSx SINE Alu 1 295 -17 2706 194 85 59 chr2 32520031 32520102 -218167752 + L1MB7 LINE L1 6484 6552 -130 621 149 8 82 chr2 32520102 32520236 -218167618 + FLAM_A SINE Alu 2 125 -8 1821 132 70 0 chr2 32520246 32520519 -218167335 + AluSx SINE Alu 3 294 -18 2706 194 85 59 chr2 32520519 32520584 -218167270 + L1MB7 LINE L1 6560 6672 -10 198 295 71 27 chr2 32520605 32520717 -218167137 + MIR SINE MIR 61 177 -85 636 135 0 0 chr2 32520852 32520956 -218166898 - FRAM SINE Alu -3 173 70 48 72 0 0 chr2 32521128 32521225 -218166629 + AT_rich Low_complexity Low_complexity 1 97 0 867 183 50 135 chr2 32522251 32522586 -218165268 + MER68 LTR ERV1 11 357 -248 1169 135 52 11 chr2 32522612 32522817 -218165037 - MER1B DNA MER1_type -78 219 35 1977 156 0 0 chr2 32523061 32523362 -218164492 + AluJb SINE Alu 1 301 -11 2137 97 13 19 chr2 32524070 32524379 -218163475 - AluSg SINE Alu -3 307 1 198 0 0 0 chr2 32524393 32524415 -218163439 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2248 113 0 3 chr2 32524423 32524732 -218163122 - AluSg SINE Alu -2 308 1 198 362 29 14 chr2 32524762 32524900 -218162954 + L2 LINE L2 2716 2855 -459 246 368 79 12 chr2 32525259 32525512 -218162342 + L2 LINE L2 3016 3285 -28 1703 162 37 0 chr2 32525624 32525896 -218161958 + AluJb SINE Alu 3 284 -28 366 23 0 0 chr2 32525896 32525939 -218161915 + (CA)n Simple_repeat Simple_repeat 2 44 0 4140 197 82 92 chr2 32526475 32528688 -218159166 + L1MC2 LINE L1 3 2236 -4190 1760 175 10 7 chr2 32528688 32528991 -218158863 + AluJb SINE Alu 1 304 -8 4140 197 82 92 chr2 32528991 32529230 -218158624 + L1MC2 LINE L1 2236 4908 -1518 2326 157 40 42 chr2 32529220 32529723 -218158131 + L1MC2 LINE L1 6015 6516 -108 * 1239 172 5 18 chr2 32529832 32530053 -218157801 - AluJb SINE Alu -94 218 1 2038 109 3 26 chr2 32530161 32530464 -218157390 + AluSx SINE Alu 1 296 -16 1348 107 0 0 chr2 32530465 32530642 -218157212 + AluSp SINE Alu 126 302 -11 1930 84 98 0 chr2 32531106 32531380 -218156474 + AluSc SINE Alu 1 301 -8 38 51 0 0 chr2 32531627 32531686 -218156168 + AT_rich Low_complexity Low_complexity 1 59 0 361 286 82 48 chr2 32531744 32531891 -218155963 - L2 LINE L2 0 3272 3121 506 255 73 114 chr2 32531966 32532385 -218155469 + MLT1H LTR MaLR 80 478 -71 2147 133 56 0 chr2 32532385 32532745 -218155109 + L1MA1 LINE L1 5923 6302 0 506 255 73 114 chr2 32532745 32532815 -218155039 + MLT1H LTR MaLR 478 549 0 1379 194 4 33 chr2 32532819 32533092 -218154762 + AluJo SINE Alu 39 303 -9 801 163 14 21 chr2 32533095 32533236 -218154618 + AluJo/FRAM SINE Alu 137 276 -36 400 293 33 43 chr2 32533448 32533654 -218154200 + MLT1H LTR MaLR 20 234 -315 267 249 129 57 chr2 32533803 32534015 -218153839 + MLT1H LTR MaLR 322 567 0 1672 185 0 10 chr2 32534332 32534634 -218153220 - AluJb SINE Alu -9 303 5 413 315 70 51 chr2 32534890 32535204 -218152650 + L3 LINE CR1 680 999 -578 21 57 0 0 chr2 32535419 32535454 -218152400 + AT_rich Low_complexity Low_complexity 1 35 0 526 198 0 10 chr2 32535454 32535550 -218152304 - L2 LINE L2 -32 3240 3146 278 399 14 14 chr2 32535544 32535687 -218152167 + L3 LINE CR1 1430 1572 -5 * 206 310 14 0 chr2 32536282 32536353 -218151501 + A-rich Low_complexity Low_complexity 2 73 0 183 114 0 0 chr2 32537216 32537251 -218150603 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 980 208 7 91 chr2 32537254 32537562 -218150292 - AluJb SINE Alu -30 282 1 1846 161 10 24 chr2 32537646 32537944 -218149910 + AluJo SINE Alu 1 294 -18 301 278 0 44 chr2 32537944 32538059 -218149795 + (TATATG)n Simple_repeat Simple_repeat 1 109 0 303 93 0 0 chr2 32538059 32538102 -218149752 + (TG)n Simple_repeat Simple_repeat 1 43 0 25 31 0 0 chr2 32538411 32538443 -218149411 + AT_rich Low_complexity Low_complexity 1 32 0 182 271 35 90 chr2 32538443 32538587 -218149267 - MIR SINE MIR -40 222 87 899 222 54 42 chr2 32539136 32539483 -218148371 + MLT1B LTR MaLR 1 374 0 5321 147 24 2 chr2 32540585 32541460 -218146394 - L1PA15 LINE L1 -5 6160 5267 467 340 94 26 chr2 32543012 32543277 -218144577 + L2 LINE L2 2681 2963 -351 2352 86 3 3 chr2 32543305 32543609 -218144245 + AluSg SINE Alu 1 304 -6 4055 203 99 65 chr2 32543681 32544194 -218143660 + Charlie1a DNA MER1_type 1 495 -2266 1822 159 10 19 chr2 32544194 32544503 -218143351 + AluJo SINE Alu 1 306 -6 4055 203 99 65 chr2 32544503 32544677 -218143177 + Charlie1a DNA MER1_type 495 662 -2099 2044 107 11 0 chr2 32544677 32544996 -218142858 + AluSq SINE Alu 2 323 0 4055 203 99 65 chr2 32544996 32545158 -218142696 + Charlie1a DNA MER1_type 662 817 -1944 2105 101 32 0 chr2 32545158 32545435 -218142419 + AluSc SINE Alu 1 286 -23 4055 203 99 65 chr2 32545435 32545989 -218141865 + Charlie1a DNA MER1_type 817 1455 0 378 336 55 0 chr2 32546061 32546189 -218141665 + L2 LINE L2 3134 3268 -4 2172 127 0 13 chr2 32546370 32546685 -218141169 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 32546792 32546813 -218141041 + AT_rich Low_complexity Low_complexity 1 21 0 292 216 34 34 chr2 32547043 32547131 -218140723 - L1ME LINE L1 -467 5654 5567 1746 152 7 14 chr2 32548087 32548376 -218139478 + AluSx SINE Alu 1 287 -25 21 36 0 0 chr2 32548379 32548407 -218139447 + AT_rich Low_complexity Low_complexity 1 28 0 2045 90 10 50 chr2 32548766 32549066 -218138788 - AluSx SINE Alu -22 290 3 1642 192 17 3 chr2 32550542 32550844 -218137010 - AluJb SINE Alu -6 306 1 488 232 26 53 chr2 32551087 32551277 -218136577 + L1ME2 LINE L1 5752 5936 -228 978 155 28 22 chr2 32551277 32551458 -218136396 + FRAM SINE Alu 1 176 0 288 0 0 0 chr2 32551461 32551493 -218136361 + (TA)n Simple_repeat Simple_repeat 1 32 0 492 246 84 0 chr2 32551550 32551692 -218136162 + L1MA10 LINE L1 6174 6327 -7 343 182 15 0 chr2 32552527 32552593 -218135261 + Alu SINE Alu 235 301 0 1090 232 24 0 chr2 32553106 32553352 -218134502 - MIR SINE MIR 0 262 11 2313 103 0 0 chr2 32554061 32554371 -218133483 - AluSg SINE Alu 0 310 1 21 36 0 0 chr2 32555693 32555721 -218132133 + AT_rich Low_complexity Low_complexity 1 28 0 2489 62 0 7 chr2 32556474 32556782 -218131072 + AluY SINE Alu 1 306 -5 1922 149 10 3 chr2 32556896 32557191 -218130663 - AluJb SINE Alu -13 299 3 217 250 28 0 chr2 32557333 32557405 -218130449 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 3886 242 70 41 chr2 32557774 32558668 -218129186 + L2 LINE L2 1567 2525 -788 1489 171 44 18 chr2 32558668 32558942 -218128912 - AluJo SINE Alu -31 281 1 3886 242 70 41 chr2 32558942 32559663 -218128191 + L2 LINE L2 2525 3224 -89 388 288 65 20 chr2 32559754 32559907 -218127947 - MIR SINE MIR -54 208 49 1709 146 16 57 chr2 32560616 32560931 -218126923 - AluJb SINE Alu -10 302 1 1925 130 0 0 chr2 32561134 32561404 -218126450 + AluSx SINE Alu 43 312 0 1074 258 168 113 chr2 32561904 32562511 -218125343 + L2 LINE L2 739 1516 -1798 464 217 11 0 chr2 32562511 32562603 -218125251 - MER81 DNA DNA -21 93 1 1074 258 168 113 chr2 32562603 32562958 -218124896 + L2 LINE L2 1516 1850 -1464 411 333 124 3 chr2 32563209 32563524 -218124330 - L1ME3A LINE L1 -222 5948 5596 3026 181 70 6 chr2 32563579 32564240 -218123614 + MER67C LTR ERV1 1 703 -7 281 274 38 31 chr2 32564251 32564410 -218123444 - L1ME3A LINE L1 -619 5543 5389 1689 158 38 38 chr2 32564611 32564689 -218123165 + MER7A DNA MER2_type 2 79 -2959 1649 138 80 4 chr2 32564689 32564964 -218122890 + AluSx SINE Alu 1 296 -16 1689 158 38 38 chr2 32564964 32565232 -218122622 + MER7A DNA MER2_type 78 346 0 443 268 176 7 chr2 32566081 32566234 -218121620 - MER5A DNA MER1_type -6 183 5 1310 154 0 0 chr2 32566730 32566918 -218120936 + AluSx SINE Alu 5 192 -120 6375 87 29 33 chr2 32566986 32568038 -218119816 + L1MA1 LINE L1 5256 6302 0 554 200 32 19 chr2 32568051 32568206 -218119648 - HsTC2a DNA Tc2 -18 724 568 2129 126 7 0 chr2 32568209 32568510 -218119344 + AluSx SINE Alu 2 304 -8 2204 118 6 13 chr2 32568546 32568859 -218118995 + AluSx SINE Alu 1 311 -1 1395 253 58 47 chr2 32568907 32569461 -218118393 - HsTC2a DNA Tc2 -181 563 4 2232 109 3 13 chr2 32569627 32569940 -218117914 - AluSg SINE Alu 0 310 1 24 32 0 0 chr2 32570231 32570262 -218117592 + AT_rich Low_complexity Low_complexity 1 31 0 483 265 42 76 chr2 32570957 32571197 -218116657 - L1ME4a LINE L1 -216 5905 5658 2198 107 7 3 chr2 32571197 32571495 -218116359 + AluSg SINE Alu 1 299 -11 483 265 42 76 chr2 32571495 32571564 -218116290 - L1ME4a LINE L1 -463 5658 5607 2317 106 0 3 chr2 32571564 32571866 -218115988 - AluSx SINE Alu -11 301 1 483 265 42 76 chr2 32571866 32571910 -218115944 - L1ME4a LINE L1 -514 5607 5563 750 144 0 0 chr2 32572411 32572522 -218115332 + FLAM_C SINE Alu 1 111 -32 25 0 0 0 chr2 32572556 32572581 -218115273 + AT_rich Low_complexity Low_complexity 1 25 0 268 383 62 6 chr2 32572604 32572660 -218115194 + MER5A DNA MER1_type 10 61 -128 2154 139 0 3 chr2 32572660 32572963 -218114891 + AluSq SINE Alu 1 302 -11 268 383 62 6 chr2 32572963 32573068 -218114786 + MER5A DNA MER1_type 61 180 -9 1563 124 22 4 chr2 32573068 32573293 -218114561 + AluJb SINE Alu 1 229 -83 182 62 31 0 chr2 32573302 32573334 -218114520 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2157 130 3 0 chr2 32573710 32574017 -218113837 - AluSq SINE Alu -5 308 1 380 313 52 47 chr2 32574701 32574893 -218112961 + L1MC4a LINE L1 5732 5924 -1884 2182 119 0 7 chr2 32574971 32575273 -218112581 + AluSc SINE Alu 1 300 -9 1699 172 7 0 chr2 32576743 32577059 -218110795 - AluJb SINE Alu 0 318 1 1680 154 92 0 chr2 32578049 32578322 -218109532 + AluSx SINE Alu 1 298 -14 1979 134 0 0 chr2 32578719 32578995 -218108859 - AluSx SINE Alu -36 276 1 1996 132 10 3 chr2 32579184 32579473 -218108381 + AluSx SINE Alu 1 291 -21 473 290 89 54 chr2 32579518 32579590 -218108264 - MIR SINE MIR -3 259 191 1677 181 0 48 chr2 32579590 32579900 -218107954 + AluJb SINE Alu 1 295 -17 473 290 89 54 chr2 32579900 32580051 -218107803 - MIR SINE MIR -71 191 28 206 212 15 183 chr2 32580019 32580156 -218107698 + MIR3 SINE MIR 47 160 -48 * 1802 156 19 19 chr2 32580216 32580524 -218107330 + AluJb SINE Alu 1 308 -4 241 91 0 0 chr2 32580848 32580881 -218106973 + L1MC5 LINE L1 6768 6800 -1161 1122 287 60 38 chr2 32580881 32581380 -218106474 + MLT2B3 LTR ERVL 1 510 -44 327 106 0 0 chr2 32581453 32581500 -218106354 + MLT2D LTR ERVL 367 413 -1 794 206 22 80 chr2 32581557 32581833 -218106021 + L1MC5 LINE L1 6975 7234 -727 1213 176 42 39 chr2 32581906 32582212 -218105642 + MER33 DNA MER1_type 1 307 -17 201 154 0 0 chr2 32582335 32582374 -218105480 + (CA)n Simple_repeat Simple_repeat 2 40 0 295 213 106 63 chr2 32582407 32582524 -218105330 + L1MC5 LINE L1 7483 7614 -347 2228 82 0 20 chr2 32582524 32582843 -218105011 + AluSp SINE Alu 1 313 0 295 213 106 63 chr2 32582843 32582932 -218104922 + L1MC5 LINE L1 7614 7698 -263 230 208 0 0 chr2 32582992 32583040 -218104814 + L1MC5 LINE L1 7709 7756 -205 2044 143 10 0 chr2 32583041 32583342 -218104512 + AluSq SINE Alu 1 304 -9 386 202 0 11 chr2 32583354 32583448 -218104406 + GA-rich Low_complexity Low_complexity 4 96 0 257 265 73 103 chr2 32583687 32583749 -218104105 + MIR SINE MIR 77 139 -123 2532 61 38 12 chr2 32583749 32584093 -218103761 + L1PA10 LINE L1 5812 6164 -4 257 265 73 103 chr2 32584093 32584166 -218103688 + MIR SINE MIR 139 208 -54 189 267 0 0 chr2 32584221 32584266 -218103588 - MIR3 SINE MIR -41 167 123 2146 116 3 10 chr2 32584558 32584869 -218102985 + AluSx SINE Alu 1 309 -3 2481 49 3 7 chr2 32585229 32585533 -218102321 - AluY SINE Alu -8 303 1 1784 163 21 7 chr2 32585566 32585854 -218102000 - AluJb SINE Alu -20 292 1 184 330 17 34 chr2 32586185 32586303 -218101551 + MER5A DNA MER1_type 3 118 -71 215 184 48 6 chr2 32586319 32586373 -218101481 + MIR SINE MIR 107 160 -62 25 65 0 0 chr2 32587024 32587070 -218100784 + AT_rich Low_complexity Low_complexity 1 46 0 22 70 0 0 chr2 32587131 32587174 -218100680 + AT_rich Low_complexity Low_complexity 1 43 0 226 171 23 34 chr2 32587373 32587461 -218100393 + (TA)n Simple_repeat Simple_repeat 2 88 0 303 221 25 90 chr2 32587461 32587583 -218100271 - L1MC4 LINE L1 -1339 6703 6590 507 17 0 0 chr2 32587684 32587744 -218100110 + (TG)n Simple_repeat Simple_repeat 2 61 0 1403 188 88 0 chr2 32587744 32588005 -218099849 - AluJo SINE Alu -28 284 1 2028 121 7 0 chr2 32588099 32588379 -218099475 - AluSx SINE Alu -30 282 1 203 264 0 19 chr2 32588575 32588628 -218099226 - L2 LINE L2 -5 3308 3257 2126 116 3 0 chr2 32588832 32589126 -218098728 + AluSx SINE Alu 1 295 -17 1529 172 77 11 chr2 32589366 32589639 -218098215 - AluJo SINE Alu -21 291 1 651 197 0 8 chr2 32589646 32589768 -218098086 - FLAM_A SINE Alu -4 138 18 2158 106 0 0 chr2 32589797 32590107 -218097747 + AluSx SINE Alu 1 310 0 2222 120 0 0 chr2 32590538 32590829 -218097025 + AluSx SINE Alu 1 291 -21 4449 161 33 15 chr2 32590832 32591281 -218096573 + L1MB5 LINE L1 5199 5639 -535 2374 102 0 0 chr2 32591281 32591585 -218096269 + AluSx SINE Alu 1 304 -8 4449 161 33 15 chr2 32591585 32592089 -218095765 + L1MB5 LINE L1 5639 6166 -8 186 71 0 0 chr2 32592192 32592220 -218095634 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 1917 121 0 72 chr2 32592574 32592906 -218094948 + AluSc SINE Alu 1 308 -1 2336 101 0 3 chr2 32592998 32593305 -218094549 + AluSq SINE Alu 1 306 -7 1053 164 31 31 chr2 32593997 32594192 -218093662 - AluSg/x SINE Alu -3 307 113 2088 134 7 0 chr2 32594405 32594704 -218093150 + AluSx SINE Alu 1 301 -11 1742 127 31 65 chr2 32595603 32595932 -218091922 - AluSx SINE Alu 0 320 2 268 253 409 0 chr2 32596084 32596214 -218091640 + MIR SINE MIR 1 77 -185 2101 137 0 3 chr2 32596214 32596521 -218091333 + AluSx SINE Alu 1 306 -6 268 253 409 0 chr2 32596521 32596576 -218091278 + MIR SINE MIR 77 262 0 1165 179 124 13 chr2 32596595 32596829 -218091025 - AluJo SINE Alu -52 260 1 1473 182 79 10 chr2 32597086 32597433 -218090421 - THE1C LTR MaLR -1 431 3 26 50 0 0 chr2 32597578 32597618 -218090236 + AT_rich Low_complexity Low_complexity 1 40 0 393 140 75 11 chr2 32597672 32597765 -218090089 + L1MB3 LINE L1 6078 6176 -7 24 32 0 0 chr2 32597765 32597796 -218090058 + AT_rich Low_complexity Low_complexity 1 31 0 192 77 0 0 chr2 32598119 32598145 -218089709 + (A)n Simple_repeat Simple_repeat 1 26 0 31 20 0 20 chr2 32598243 32598260 -218089594 + AT_rich Low_complexity Low_complexity 1 17 -31 1590 201 0 10 chr2 32598260 32598554 -218089300 + AluJo SINE Alu 2 292 -20 31 20 0 20 chr2 32598554 32598585 -218089269 + AT_rich Low_complexity Low_complexity 17 48 0 3627 206 102 100 chr2 32599965 32600126 -218087728 + L1MC3 LINE L1 6085 6244 -1541 2273 99 0 3 chr2 32600126 32600419 -218087435 + AluSc SINE Alu 1 292 -17 2372 81 3 0 chr2 32600419 32600717 -218087137 + AluSg SINE Alu 1 299 -11 3627 206 102 100 chr2 32600717 32601066 -218086788 + L1MC3 LINE L1 6244 6591 -1194 2045 103 0 71 chr2 32601066 32601377 -218086477 + AluSx SINE Alu 1 289 -23 3627 206 102 100 chr2 32601377 32601539 -218086315 + L1MC3 LINE L1 6591 6751 -1034 2274 95 3 3 chr2 32601539 32601843 -218086011 - AluSp SINE Alu -9 304 1 3627 206 102 100 chr2 32601843 32602206 -218085648 + L1MC3 LINE L1 6751 7112 -673 245 238 0 16 chr2 32602206 32602269 -218085585 + MLT1F1 LTR MaLR 70 131 -436 3627 206 102 100 chr2 32602269 32602637 -218085217 + L1MC3 LINE L1 7112 7561 -224 2134 87 26 23 chr2 32602637 32602946 -218084908 + AluY SINE Alu 1 310 -1 3627 206 102 100 chr2 32602946 32603159 -218084695 + L1MC3 LINE L1 7561 7772 -13 2176 110 3 0 chr2 32603444 32603735 -218084119 - AluSx SINE Alu -20 292 1 766 199 0 0 chr2 32603956 32604087 -218083767 + FLAM_C SINE Alu 1 131 -12 572 86 0 0 chr2 32604111 32604192 -218083662 + HY1 scRNA scRNA 17 97 -15 1479 66 0 25 chr2 32604222 32604418 -218083436 + AluY SINE Alu 1 191 -120 1174 110 0 0 chr2 32604426 32604590 -218083264 + AluY SINE Alu 127 290 -21 540 326 86 50 chr2 32604698 32605115 -218082739 - L2 LINE L2 -10 3303 2872 1454 210 17 0 chr2 32605115 32605406 -218082448 - AluJo SINE Alu -14 298 3 245 300 29 0 chr2 32605703 32605773 -218082081 - L2 LINE L2 0 3272 3201 220 260 73 42 chr2 32605886 32605982 -218081872 - MER5A DNA MER1_type -2 187 89 2399 202 118 43 chr2 32606266 32606374 -218081480 + Charlie1 DNA MER1_type 49 147 -2614 2252 101 3 0 chr2 32606374 32606672 -218081182 + AluSx SINE Alu 1 299 -13 2399 202 118 43 chr2 32606672 32607034 -218080820 + Charlie1 DNA MER1_type 147 480 -2281 2301 81 3 66 chr2 32607034 32607368 -218080486 + AluSp SINE Alu 1 313 0 2399 202 118 43 chr2 32607368 32607767 -218080087 + Charlie1 DNA MER1_type 480 2274 -487 1687 135 25 36 chr2 32607862 32607944 -218079910 + Charlie1 DNA MER1_type 2264 2345 -416 1939 151 3 10 chr2 32607944 32608242 -218079612 + AluJb SINE Alu 1 296 -16 1687 135 25 36 chr2 32608242 32608521 -218079333 + Charlie1 DNA MER1_type 2345 2621 -140 655 174 0 0 chr2 32608558 32608667 -218079187 - AluY SINE Alu -9 302 194 741 159 23 15 chr2 32608684 32608816 -218079038 - FLAM_C SINE Alu 0 133 1 513 233 0 0 chr2 32608838 32608954 -218078900 + Charlie1 DNA MER1_type 2632 2747 -14 344 293 54 75 chr2 32609125 32609364 -218078490 + L1MC4a LINE L1 5833 6066 -1742 2296 84 7 0 chr2 32609400 32609697 -218078157 + AluSp SINE Alu 1 299 -14 28 0 0 0 chr2 32609726 32609754 -218078100 + AT_rich Low_complexity Low_complexity 1 28 0 944 197 11 22 chr2 32610323 32610506 -218077348 + MER58A DNA MER1_type 27 207 -17 2266 97 0 10 chr2 32610611 32610909 -218076945 + AluSx SINE Alu 1 295 -17 939 182 0 0 chr2 32611144 32611298 -218076556 + FRAM SINE Alu 9 162 -14 339 136 0 0 chr2 32611299 32611358 -218076496 + L1MC/D LINE L1 5378 5436 -2372 * 384 298 87 92 chr2 32611333 32612059 -218075795 + L1MEc LINE L1 10 738 -5658 2493 93 0 0 chr2 32612059 32612370 -218075484 - AluSx SINE Alu -1 311 1 384 298 87 92 chr2 32612370 32612457 -218075397 + L1MEc LINE L1 738 824 -5572 2179 117 0 3 chr2 32612457 32612769 -218075085 + AluSx SINE Alu 1 311 0 1806 129 4 0 chr2 32612776 32613032 -218074822 + AluJb SINE Alu 1 257 -55 384 298 87 92 chr2 32613032 32613279 -218074575 + L1MEc LINE L1 830 1077 -5319 2251 108 0 7 chr2 32613279 32613575 -218074279 + AluSx SINE Alu 1 294 -18 384 298 87 92 chr2 32613575 32614141 -218073713 + L1MEc LINE L1 1077 1638 -4758 330 203 29 0 chr2 32614207 32614276 -218073578 + AluSp SINE Alu 121 191 -112 443 87 14 0 chr2 32614276 32614345 -218073509 + (GA)n Simple_repeat Simple_repeat 1 70 0 515 257 29 38 chr2 32614347 32614380 -218073474 + L1MEc LINE L1 2553 2585 -3630 2120 123 13 0 chr2 32614380 32614680 -218073174 + AluSx SINE Alu 6 309 -3 515 257 29 38 chr2 32614680 32614856 -218072998 + L1MEc LINE L1 2585 2760 -3455 882 192 0 0 chr2 32614858 32615004 -218072850 - FRAM SINE Alu -30 146 1 273 296 8 16 chr2 32615238 32615363 -218072491 + L1M4 LINE L1 1564 1687 -4855 634 67 0 0 chr2 32615494 32615569 -218072285 - AluSq/x SINE Alu -162 150 76 621 317 108 21 chr2 32615716 32616050 -218071804 - L2 LINE L2 -372 2942 2580 1739 143 20 34 chr2 32616128 32616422 -218071432 - AluJb SINE Alu -22 290 1 2649 226 91 45 chr2 32616422 32616628 -218071226 + L2 LINE L2 1997 2192 -1121 2220 116 0 3 chr2 32616628 32616930 -218070924 + AluSg SINE Alu 1 301 -9 2649 226 91 45 chr2 32616930 32617490 -218070364 + L2 LINE L2 2192 2725 -588 1766 180 0 24 chr2 32617490 32617784 -218070070 + AluJo SINE Alu 1 287 -25 2649 226 91 45 chr2 32617784 32617992 -218069862 + L2 LINE L2 2725 3015 -298 1737 152 26 30 chr2 32617992 32618295 -218069559 - AluJo SINE Alu -10 302 1 2649 226 91 45 chr2 32618295 32618333 -218069521 + L2 LINE L2 3015 3050 -263 2492 65 0 7 chr2 32618333 32618639 -218069215 - AluY SINE Alu -7 304 1 1126 75 0 0 chr2 32618642 32618775 -218069079 - AluSq/x SINE Alu -180 133 1 304 119 0 0 chr2 32618912 32618954 -218068900 - MER4E LTR ERV1 -74 692 651 290 236 71 79 chr2 32618977 32619104 -218068750 + L2 LINE L2 3180 3305 -8 2556 43 0 7 chr2 32619142 32619447 -218068407 - AluY SINE Alu -7 304 2 27 73 0 0 chr2 32619496 32619551 -218068303 + AT_rich Low_complexity Low_complexity 1 55 0 214 298 12 6 chr2 32619652 32619737 -218068117 + MIR SINE MIR 1 85 -137 323 282 58 10 chr2 32619789 32619906 -218067948 + MIR SINE MIR 37 159 -49 2191 112 7 0 chr2 32619975 32620279 -218067575 + AluY SINE Alu 1 306 -5 257 303 0 0 chr2 32620279 32620368 -218067486 + L1MC4 LINE L1 6615 6703 -1339 237 179 45 0 chr2 32620343 32620410 -218067444 - L1MCa LINE L1 -4362 2064 1995 * 336 143 0 0 chr2 32620410 32620466 -218067388 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 269 134 75 15 chr2 32620495 32620562 -218067292 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 341 254 127 8 chr2 32620687 32620813 -218067041 + MIR SINE MIR 61 201 -61 370 271 34 8 chr2 32621538 32621656 -218066198 + L1ME3A LINE L1 6042 6162 -8 491 253 77 16 chr2 32621697 32621879 -218065975 + L1ME3A LINE L1 4973 5165 -981 920 135 0 0 chr2 32621879 32622005 -218065849 + AluJo SINE Alu 1 126 -186 1355 211 33 7 chr2 32622015 32622321 -218065533 + AluJo SINE Alu 1 313 0 1619 196 72 58 chr2 32622356 32622750 -218065104 + L1ME3A LINE L1 5216 5663 -507 2279 103 0 13 chr2 32622750 32623051 -218064803 + AluSx SINE Alu 1 297 -15 1619 196 72 58 chr2 32623051 32623274 -218064580 + L1ME3A LINE L1 5663 5882 -288 933 168 18 6 chr2 32623282 32623449 -218064405 + AluJo SINE Alu 136 304 -8 302 278 217 0 chr2 32623453 32623633 -218064221 + L1ME3A LINE L1 5895 6113 -57 250 293 12 37 chr2 32623879 32623961 -218063893 - L2 LINE L2 -7 3306 3227 309 336 80 46 chr2 32624022 32624260 -218063594 - L2 LINE L2 -220 3052 2807 228 162 0 0 chr2 32624498 32624535 -218063319 - MER5A DNA MER1_type -151 38 2 651 220 46 64 chr2 32624549 32624767 -218063087 - MER58C DNA MER1_type -1 214 1 2362 98 0 3 chr2 32624794 32625100 -218062754 + AluSg1 SINE Alu 1 305 -4 228 160 20 0 chr2 32625609 32625659 -218062195 - LTR66 LTR ERVL -166 444 394 2206 95 3 3 chr2 32626413 32626709 -218061145 + AluSg SINE Alu 1 296 -14 69 99 0 0 chr2 32628070 32628293 -218059561 + GC_rich Low_complexity Low_complexity 1 223 0 212 68 0 68 chr2 32628499 32628543 -218059311 + (GGA)n Simple_repeat Simple_repeat 3 43 0 374 199 11 84 chr2 32628700 32628891 -218058963 + C-rich Low_complexity Low_complexity 1 177 0 183 164 15 104 chr2 32629549 32629616 -218058238 + MIR SINE MIR 117 177 -85 1631 168 7 26 chr2 32629885 32630189 -218057665 + AluJo SINE Alu 5 302 -10 2400 85 0 25 chr2 32630529 32630848 -218057006 - AluSx SINE Alu -1 311 1 518 258 56 26 chr2 32631127 32631297 -218056557 + MIR SINE MIR 38 212 -50 2097 114 13 3 chr2 32631837 32632135 -218055719 + AluSg SINE Alu 1 301 -9 191 143 0 24 chr2 32632135 32632177 -218055677 + (GGGA)n Simple_repeat Simple_repeat 3 43 0 478 207 81 94 chr2 32632182 32632310 -218055544 + L1MC4 LINE L1 5678 5806 -348 1556 161 31 49 chr2 32632310 32632596 -218055258 + AluJo SINE Alu 1 281 -31 2611 50 0 0 chr2 32632596 32632892 -218054962 - AluY SINE Alu -14 297 1 478 207 81 94 chr2 32632892 32633022 -218054832 + L1MC4 LINE L1 5641 5771 -383 1616 138 43 53 chr2 32633675 32633979 -218053875 + AluJo SINE Alu 1 301 -11 1948 104 14 34 chr2 32634011 32634308 -218053546 - AluSx SINE Alu -21 291 1 2446 85 0 0 chr2 32634986 32635292 -218052562 - AluSx SINE Alu -6 306 1 2282 111 7 0 chr2 32635444 32635751 -218052103 + AluSq SINE Alu 1 309 -4 1590 179 98 9 chr2 32635912 32636247 -218051607 + MLT1A1 LTR MaLR 1 365 0 1961 112 25 7 chr2 32636555 32636840 -218051014 + AluSc SINE Alu 1 290 -19 1997 144 3 23 chr2 32636847 32637152 -218050702 + AluJb SINE Alu 1 299 -13 1041 139 7 0 chr2 32637197 32637371 -218050483 - AluSg/x SINE Alu 0 306 132 836 215 13 0 chr2 32637469 32637627 -218050227 + AluSg/x SINE Alu 130 289 -23 317 234 0 43 chr2 32637630 32637642 -218050212 - L1MC4 LINE L1 -1339 6703 6692 2124 105 7 23 chr2 32637642 32637946 -218049908 + AluSq SINE Alu 1 299 -14 317 234 0 43 chr2 32637946 32638027 -218049827 - L1MC4 LINE L1 -1350 6692 6614 * 346 283 0 0 chr2 32637947 32638039 -218049815 + L1MC4 LINE L1 6614 6705 -1337 225 159 0 0 chr2 32638040 32638084 -218049770 + (TA)n Simple_repeat Simple_repeat 1 44 0 850 169 88 0 chr2 32638176 32638324 -218049530 + FRAM SINE Alu 1 155 -21 1344 199 13 55 chr2 32638326 32638633 -218049221 + AluJo SINE Alu 1 294 -18 555 224 20 20 chr2 32638661 32638813 -218049041 + L1MA10 LINE L1 6183 6334 0 190 221 106 88 chr2 32638816 32638929 -218048925 + MIR SINE MIR 138 252 -10 803 156 0 22 chr2 32638958 32639093 -218048761 + AluJo/FLAM SINE Alu 2 133 -169 1968 91 44 4 chr2 32639096 32639371 -218048483 + AluSx SINE Alu 1 286 -26 2356 103 0 3 chr2 32639505 32639815 -218048039 + AluSx SINE Alu 1 309 -3 217 176 20 0 chr2 32639899 32639950 -218047904 + T-rich Low_complexity Low_complexity 4 55 0 2180 131 0 0 chr2 32640041 32640338 -218047516 + AluSx SINE Alu 5 301 -11 2395 85 7 7 chr2 32640620 32640925 -218046929 - AluSg SINE Alu -5 305 1 532 150 71 114 chr2 32641004 32641144 -218046710 - MER20 DNA MER1_type 0 219 86 596 122 0 0 chr2 32641145 32641227 -218046627 + AluSg1 SINE Alu 1 82 -227 334 156 10 156 chr2 32641240 32641336 -218046518 - MER20 DNA MER1_type -137 82 1 466 278 108 10 chr2 32641507 32641701 -218046153 + MIR SINE MIR 50 262 0 278 284 0 37 chr2 32641753 32641834 -218046020 - MER5A DNA MER1_type -3 186 109 238 258 43 0 chr2 32642548 32642641 -218045213 - MARNA DNA Mariner -361 225 129 851 216 28 0 chr2 32642647 32642823 -218045031 + L1ME3A LINE L1 5990 6170 0 2272 104 3 0 chr2 32643293 32643582 -218044272 + AluSg SINE Alu 1 290 -20 2063 139 0 7 chr2 32643590 32643892 -218043962 + AluSg SINE Alu 1 300 -10 1699 184 7 7 chr2 32643935 32644228 -218043626 + AluJo SINE Alu 1 293 -19 1594 158 74 11 chr2 32644257 32644542 -218043312 + AluJb SINE Alu 1 303 -9 1834 122 13 69 chr2 32644618 32644942 -218042912 + AluSq SINE Alu 1 307 0 183 156 0 0 chr2 32645015 32645047 -218042807 + T-rich Low_complexity Low_complexity 1 32 0 395 100 43 250 chr2 32645047 32645103 -218042751 - HY1 scRNA scRNA -1 111 45 2002 142 17 0 chr2 32645103 32645399 -218042455 + AluSx SINE Alu 1 301 -11 395 100 43 250 chr2 32645399 32645412 -218042442 - HY1 scRNA scRNA -67 45 31 1882 106 0 4 chr2 32645412 32645658 -218042196 + AluSq SINE Alu 56 300 -13 395 100 43 250 chr2 32645658 32645727 -218042127 - HY1 scRNA scRNA -81 31 1 2514 60 7 0 chr2 32645737 32646037 -218041817 - AluY SINE Alu -9 302 1 1051 139 6 35 chr2 32646217 32646390 -218041464 - FRAM SINE Alu -9 167 1 1958 106 38 0 chr2 32646630 32646894 -218040960 + AluSc SINE Alu 1 274 -35 1362 124 0 5 chr2 32646894 32647099 -218040755 + AluSg/x SINE Alu 105 310 -301 2066 130 3 0 chr2 32647099 32647384 -218040470 + AluSx SINE Alu 1 286 -26 1362 124 0 5 chr2 32647384 32647402 -218040452 + AluSg/x SINE Alu 310 611 0 22 0 0 0 chr2 32648174 32648196 -218039658 + AT_rich Low_complexity Low_complexity 1 22 0 592 221 7 0 chr2 32648246 32648386 -218039468 - MER113 DNA MER1_type? -223 298 158 1170 181 9 19 chr2 32648408 32648458 -218039396 + AluJb SINE Alu 85 134 -178 2486 66 0 0 chr2 32648458 32648759 -218039095 + AluY SINE Alu 1 301 -10 1170 181 9 19 chr2 32648759 32648924 -218038930 + AluJb SINE Alu 134 298 -14 2156 115 16 0 chr2 32649250 32649555 -218038299 + AluSg SINE Alu 1 310 0 976 183 0 27 chr2 32649555 32649722 -218038132 + AluSg/x SINE Alu 132 295 -17 2400 101 0 0 chr2 32649722 32650030 -218037824 + AluSg SINE Alu 1 308 -2 976 183 0 27 chr2 32650030 32650048 -218037806 + AluSg/x SINE Alu 295 312 0 806 159 0 0 chr2 32650687 32650800 -218037054 + FLAM_C SINE Alu 1 113 -30 23 42 0 21 chr2 32650804 32650825 -218037029 + AT_rich Low_complexity Low_complexity 1 21 -26 2255 101 0 0 chr2 32650825 32651112 -218036742 + AluSg SINE Alu 1 287 -23 23 42 0 21 chr2 32651112 32651138 -218036716 + AT_rich Low_complexity Low_complexity 21 47 0 2214 105 10 0 chr2 32651138 32651433 -218036421 + AluSx SINE Alu 1 298 -14 2229 100 7 0 chr2 32651500 32651799 -218036055 + AluSp SINE Alu 1 301 -12 1112 253 57 64 chr2 32651974 32652329 -218035525 + L1MEc LINE L1 136 489 -5907 2593 138 34 2 chr2 32652329 32652742 -218035112 - MSTB LTR MaLR 0 426 1 1112 253 57 64 chr2 32652742 32652825 -218035029 + L1MEc LINE L1 489 571 -5825 2153 121 13 0 chr2 32652827 32653125 -218034729 + AluSq SINE Alu 2 303 -10 446 70 0 0 chr2 32653129 32653186 -218034668 + AluSg/x SINE Alu 191 247 -62 1096 164 17 59 chr2 32653186 32653424 -218034430 + AluJo SINE Alu 85 312 0 2032 99 46 11 chr2 32653432 32653714 -218034140 + AluSc SINE Alu 2 293 -16 2134 142 3 0 chr2 32653761 32654072 -218033782 + AluSx SINE Alu 1 312 0 1744 166 25 0 chr2 32654093 32654376 -218033478 - AluJb SINE Alu -11 301 12 1228 259 108 37 chr2 32654400 32654499 -218033355 + L1MEc LINE L1 1299 1389 -5007 2607 43 3 3 chr2 32654499 32654800 -218033054 + AluY SINE Alu 1 301 -10 1501 77 0 10 chr2 32654800 32654995 -218032859 + AluY SINE Alu 106 298 -13 1228 259 108 37 chr2 32654995 32655411 -218032443 + L1MEc LINE L1 1388 1852 -4544 1311 159 49 9 chr2 32655420 32655646 -218032208 - AluJb SINE Alu -18 294 60 2309 93 17 0 chr2 32655671 32655962 -218031892 - AluSx SINE Alu -16 296 1 21 0 0 0 chr2 32656057 32656078 -218031776 + AT_rich Low_complexity Low_complexity 1 21 0 307 253 24 0 chr2 32656121 32656204 -218031650 - MIR SINE MIR -140 122 38 1673 79 162 26 chr2 32656245 32656510 -218031344 - AluSx SINE Alu -1 301 1 526 214 0 0 chr2 32656547 32656650 -218031204 - AluJb SINE Alu -30 282 180 2256 111 7 0 chr2 32656749 32657056 -218030798 - AluSx SINE Alu -2 310 2 2175 84 3 78 chr2 32659067 32659254 -218028600 - AluSg SINE Alu -12 298 143 2318 76 6 47 chr2 32659254 32659571 -218028283 - AluSc SINE Alu -4 305 2 2175 84 3 78 chr2 32659571 32659705 -218028149 - AluSg SINE Alu -167 143 1 693 147 199 0 chr2 32660055 32660190 -218027664 + AluJb SINE Alu 135 296 -16 443 194 163 10 chr2 32660190 32660288 -218027566 + AluY SINE Alu 1 113 -198 22 56 0 0 chr2 32660290 32660326 -218027528 + AT_rich Low_complexity Low_complexity 1 36 0 1100 197 24 5 chr2 32660485 32660698 -218027156 + AluJo SINE Alu 86 302 -10 2481 78 0 3 chr2 32660859 32661168 -218026686 - AluY SINE Alu -3 308 1 2030 121 17 3 chr2 32661302 32661591 -218026263 + AluSx SINE Alu 1 293 -19 1498 171 65 7 chr2 32661655 32661930 -218025924 + AluJb SINE Alu 1 291 -21 1835 82 129 0 chr2 32662346 32662602 -218025252 + AluSc SINE Alu 1 289 -20 2079 133 0 0 chr2 32662792 32663093 -218024761 + AluSx SINE Alu 1 301 -11 207 257 140 103 chr2 32663093 32663154 -218024700 + MIR SINE MIR 60 117 -145 2180 142 0 0 chr2 32663154 32663463 -218024391 - AluSx SINE Alu -3 309 1 207 257 140 103 chr2 32663463 32663537 -218024317 + MIR SINE MIR 117 200 -62 1618 165 49 7 chr2 32663547 32663832 -218024022 + AluJb SINE Alu 1 297 -15 1858 160 0 14 chr2 32663930 32664241 -218023613 - AluSx SINE Alu 0 307 1 2240 80 7 10 chr2 32664642 32664931 -218022923 + AluY SINE Alu 1 288 -23 2119 123 0 17 chr2 32665053 32665355 -218022499 + AluSx SINE Alu 3 299 -13 833 219 0 0 chr2 32665503 32665667 -218022187 - FAM SINE Alu -11 174 11 806 161 0 29 chr2 32665882 32666019 -218021835 + FLAM_C SINE Alu 1 133 0 2202 107 0 3 chr2 32666068 32666358 -218021496 + AluSx SINE Alu 1 289 -23 1673 135 0 105 chr2 32666424 32666758 -218021096 + AluJb SINE Alu 1 299 -3 1915 111 76 3 chr2 32666759 32667048 -218020806 + AluSx SINE Alu 2 311 -1 23 68 0 0 chr2 32667048 32667092 -218020762 + AT_rich Low_complexity Low_complexity 1 44 0 556 112 9 47 chr2 32667105 32667212 -218020642 + L1MA4 LINE L1 6194 6296 -4 2163 86 7 14 chr2 32667245 32667535 -218020319 - AluSx SINE Alu -24 288 1 233 260 55 0 chr2 32667569 32667642 -218020212 + L1ME LINE L1 5601 5677 -444 2025 137 3 0 chr2 32667757 32668049 -218019805 - AluSx SINE Alu -19 293 1 2475 71 0 0 chr2 32668155 32668464 -218019390 + AluY SINE Alu 1 309 -2 2233 68 0 83 chr2 32668469 32668793 -218019061 + AluSg SINE Alu 2 298 -12 2177 160 87 112 chr2 32668866 32668960 -218018894 + MER68 LTR ERV1 1 96 -466 2328 66 0 69 chr2 32668960 32669279 -218018575 - AluY SINE Alu -14 297 1 2177 160 87 112 chr2 32669279 32669299 -218018555 + MER68 LTR ERV1 96 115 -447 1920 101 4 8 chr2 32669299 32669557 -218018297 + AluSg SINE Alu 29 285 -25 2177 160 87 112 chr2 32669557 32669606 -218018248 + MER68 LTR ERV1 115 164 -398 1723 172 0 0 chr2 32669606 32669918 -218017936 - AluJb SINE Alu 0 312 1 2177 160 87 112 chr2 32669918 32670252 -218017602 + MER68 LTR ERV1 164 488 -74 1642 128 0 0 chr2 32670252 32670478 -218017376 + AluSg/x SINE Alu 69 294 -16 2177 160 87 112 chr2 32670478 32670550 -218017304 + MER68 LTR ERV1 488 560 -2 1616 180 0 44 chr2 32670713 32671007 -218016847 + AluJb SINE Alu 1 281 -31 1033 78 0 0 chr2 32671010 32671138 -218016716 - AluSc SINE Alu -14 295 168 2489 70 3 0 chr2 32671432 32671732 -218016122 - AluSp SINE Alu -12 301 1 23 78 0 0 chr2 32671764 32671815 -218016039 + AT_rich Low_complexity Low_complexity 1 51 0 236 75 0 25 chr2 32672057 32672097 -218015757 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 964 196 0 6 chr2 32672099 32672262 -218015592 - AluSg/x SINE Alu -31 281 120 1961 142 0 14 chr2 32672270 32672406 -218015448 + AluSx SINE Alu 1 137 -186 2333 98 0 16 chr2 32672406 32672724 -218015130 + AluSq SINE Alu 1 313 0 1961 142 0 14 chr2 32672724 32672914 -218014940 + AluSx SINE Alu 137 323 0 669 191 0 0 chr2 32672930 32673056 -218014798 + FRAM SINE Alu 41 166 -10 564 198 11 126 chr2 32673086 32673189 -218014665 + Charlie8 DNA MER1_type 105 180 -150 1874 164 7 3 chr2 32673189 32673487 -218014367 + AluJb SINE Alu 1 299 -13 564 198 11 126 chr2 32673487 32673565 -218014289 + Charlie8 DNA MER1_type 180 265 -65 26 30 0 0 chr2 32673979 32674012 -218013842 + AT_rich Low_complexity Low_complexity 1 33 0 633 186 110 0 chr2 32674405 32674523 -218013331 - FLAM_A SINE Alu 0 133 3 1588 174 3 48 chr2 32675165 32675459 -218012395 + AluJb SINE Alu 1 281 -31 2101 127 0 13 chr2 32675626 32675926 -218011928 - AluSx SINE Alu -16 296 1 1504 270 57 29 chr2 32676044 32676578 -218011276 + MLT1H LTR MaLR 1 593 0 2251 103 7 3 chr2 32676867 32677169 -218010685 + AluSg SINE Alu 1 303 -7 1868 166 0 22 chr2 32677379 32677518 -218010336 + AluJb SINE Alu 1 142 -170 2202 100 3 13 chr2 32677518 32677819 -218010035 + AluSc SINE Alu 4 301 -8 1868 166 0 22 chr2 32677819 32677992 -218009862 + AluJb SINE Alu 142 306 -6 21 36 0 0 chr2 32678024 32678052 -218009802 + AT_rich Low_complexity Low_complexity 1 28 0 692 188 0 62 chr2 32678052 32678196 -218009658 + FLAM_C SINE Alu 3 137 -6 36 23 0 0 chr2 32678199 32678242 -218009612 + AT_rich Low_complexity Low_complexity 1 43 0 250 305 116 0 chr2 32678300 32678395 -218009459 - MIR SINE MIR -151 111 6 505 245 36 0 chr2 32678487 32678626 -218009228 + L1ME3A LINE L1 5727 5870 -300 764 164 17 0 chr2 32678638 32678754 -218009100 + AluJb SINE Alu 1 118 -194 26 30 0 0 chr2 32678759 32678792 -218009062 + AT_rich Low_complexity Low_complexity 1 33 0 2434 75 3 0 chr2 32679120 32679413 -218008441 - AluSp SINE Alu -19 294 1 1866 136 7 35 chr2 32679452 32679762 -218008092 - AluSx SINE Alu -11 301 1 977 117 0 7 chr2 32679907 32680044 -218007810 + AluJo SINE Alu 6 141 -171 1947 132 3 26 chr2 32680044 32680347 -218007507 + AluJb SINE Alu 5 300 -12 232 218 13 13 chr2 32680521 32680599 -218007255 + GA-rich Low_complexity Low_complexity 1 78 0 1261 92 0 6 chr2 32681134 32681307 -218006547 - AluSg/x SINE Alu -10 300 129 27 49 0 0 chr2 32682027 32682068 -218005786 + GC_rich Low_complexity Low_complexity 1 41 0 2290 88 0 0 chr2 32683133 32683427 -218004427 - AluSg SINE Alu -16 294 1 367 200 11 22 chr2 32683537 32683627 -218004227 - MIR SINE MIR -71 191 103 2063 130 3 3 chr2 32684080 32684379 -218003475 - AluSx SINE Alu -9 303 5 2239 117 0 0 chr2 32684497 32684788 -218003066 + AluSg SINE Alu 1 291 -19 2024 137 10 13 chr2 32684801 32685114 -218002740 + AluJo SINE Alu 1 312 0 2296 112 0 0 chr2 32685167 32685471 -218002383 - AluSx SINE Alu -8 304 1 31 0 0 0 chr2 32685734 32685765 -218002089 + AT_rich Low_complexity Low_complexity 1 31 0 527 171 29 48 chr2 32685765 32685870 -218001984 - AluJo SINE Alu -21 291 189 256 188 0 0 chr2 32685870 32685918 -218001936 - AluJo SINE Alu -170 132 85 2710 45 0 0 chr2 32686076 32686386 -218001468 - AluY SINE Alu 0 311 2 2232 111 0 7 chr2 32686435 32686733 -218001121 - AluSx SINE Alu -16 296 1 1125 116 12 6 chr2 32686854 32687018 -218000836 + AluSq SINE Alu 134 298 -15 2067 136 0 10 chr2 32687037 32687345 -218000509 + AluSx SINE Alu 1 305 -7 2392 81 0 10 chr2 32687661 32687968 -217999886 - AluY SINE Alu -7 304 1 2257 110 0 7 chr2 32688178 32688477 -217999377 - AluSx SINE Alu -15 297 1 998 230 0 5 chr2 32688753 32688957 -217998897 - AluJo SINE Alu -26 286 84 4943 139 46 27 chr2 32689549 32690143 -217997711 - MER4D LTR ERV1 -1 902 284 2418 84 0 3 chr2 32690143 32690452 -217997402 - AluY SINE Alu -3 308 1 4943 139 46 27 chr2 32690452 32690741 -217997113 - MER4D LTR ERV1 -619 284 2 818 174 0 0 chr2 32691310 32691442 -217996412 - AluSq/x SINE Alu -181 132 1 742 164 9 0 chr2 32691621 32691737 -217996117 - FLAM_C SINE Alu -25 118 2 2229 184 154 28 chr2 32692062 32692607 -217995247 - MER90 LTR ERV1 0 614 1 2205 130 0 3 chr2 32692609 32692916 -217994938 - AluSx SINE Alu -6 306 1 190 194 28 0 chr2 32693052 32693088 -217994766 + L2 LINE L2 3218 3254 -18 2514 69 0 19 chr2 32693250 32693567 -217994287 + AluY SINE Alu 1 311 0 2158 119 3 13 chr2 32693650 32693961 -217993893 - AluSx SINE Alu -2 310 3 2264 125 0 0 chr2 32694007 32694311 -217993543 - AluSx SINE Alu -8 304 1 740 208 0 0 chr2 32694501 32694626 -217993228 - FLAM_C SINE Alu -12 131 7 593 210 0 0 chr2 32694871 32694971 -217992883 - FLAM_A SINE Alu -42 100 1 2401 96 0 0 chr2 32694982 32695284 -217992570 - AluSg SINE Alu -8 302 1 320 357 0 0 chr2 32695642 32695754 -217992100 - MIR SINE MIR -63 145 34 1569 177 13 57 chr2 32695963 32696069 -217991785 + AluJo SINE Alu 3 112 -200 2191 13 0 0 chr2 32696069 32696343 -217991511 - AluYa5 SINE Alu 0 311 58 1569 177 13 57 chr2 32696343 32696354 -217991500 + AluJo SINE Alu 112 122 -190 1562 129 0 17 chr2 32696354 32696586 -217991268 - AluSx SINE Alu -84 228 1 1569 177 13 57 chr2 32696586 32696767 -217991087 + AluJo SINE Alu 122 289 -23 1423 183 56 12 chr2 32696995 32697247 -217990607 - AluJb SINE Alu -45 267 5 1681 161 46 7 chr2 32697345 32697625 -217990229 + AluJb SINE Alu 1 291 -21 1342 190 20 8 chr2 32697676 32697923 -217989931 - AluJb SINE Alu -17 295 46 2358 152 63 11 chr2 32697957 32698408 -217989446 - L1M3 LINE L1 -428 5752 5281 268 288 15 0 chr2 32698462 32698528 -217989326 - MER58A DNA MER1_type -34 73 7 2155 126 0 22 chr2 32698895 32699074 -217988780 - AluY SINE Alu 0 311 141 2200 112 0 3 chr2 32699074 32699368 -217988486 - AluSg SINE Alu -16 294 2 2155 126 0 22 chr2 32699368 32699506 -217988348 - AluY SINE Alu -170 141 1 1853 101 0 4 chr2 32699678 32699926 -217987928 + AluSc SINE Alu 63 309 0 1919 105 77 11 chr2 32700117 32700403 -217987451 - AluSq SINE Alu -8 305 1 2294 92 3 3 chr2 32700525 32700819 -217987035 + AluSp SINE Alu 2 295 -18 2122 200 45 58 chr2 32700824 32701047 -217986807 - L1ME1 LINE L1 -209 5957 5733 198 71 0 0 chr2 32701047 32701075 -217986779 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2122 200 45 58 chr2 32701075 32701090 -217986764 - L1ME1 LINE L1 -433 5733 5719 2045 103 52 0 chr2 32701090 32701362 -217986492 - AluSg SINE Alu -20 290 5 2122 200 45 58 chr2 32701362 32701743 -217986111 - L1ME1 LINE L1 -447 5719 5345 410 100 0 40 chr2 32701766 32701866 -217985988 + (TA)n Simple_repeat Simple_repeat 1 96 0 2088 119 3 23 chr2 32701866 32702168 -217985686 - AluSx SINE Alu -16 296 1 290 252 38 54 chr2 32702229 32702248 -217985606 + L1MC/D LINE L1 5616 5634 -541 2177 68 39 14 chr2 32702248 32702552 -217985302 - AluY SINE Alu 0 311 1 290 252 38 54 chr2 32702552 32702692 -217985162 + L1MC/D LINE L1 5634 5768 -407 2314 108 0 7 chr2 32702692 32702998 -217984856 + AluSx SINE Alu 1 304 -8 1470 215 3 37 chr2 32703284 32703605 -217984249 - AluJb SINE Alu -2 310 1 2097 88 0 25 chr2 32703842 32704127 -217983727 + AluSg SINE Alu 1 278 -32 270 0 0 0 chr2 32704127 32704157 -217983697 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 1803 159 7 26 chr2 32704263 32704565 -217983289 + AluJo SINE Alu 1 296 -16 2083 112 27 10 chr2 32704568 32704863 -217982991 + AluSx SINE Alu 1 300 -12 195 42 0 0 chr2 32705732 32705756 -217982098 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1740 163 0 66 chr2 32705772 32705949 -217981905 - AluJo SINE Alu -2 310 123 258 32 0 0 chr2 32705949 32705980 -217981874 + (TTA)n Simple_repeat Simple_repeat 1 31 0 1995 130 0 14 chr2 32705981 32706265 -217981589 - AluSx SINE Alu -25 287 8 1740 163 0 66 chr2 32706265 32706417 -217981437 - AluJo SINE Alu -188 124 1 2338 103 3 0 chr2 32706447 32706749 -217981105 + AluSp SINE Alu 1 303 -10 311 210 175 7 chr2 32706751 32706894 -217980960 - HsTC2 DNA Tc2 0 1898 1732 608 260 23 23 chr2 32706900 32707073 -217980781 - HsTC2 DNA Tc2 -1722 176 4 1151 168 134 34 chr2 32707158 32707420 -217980434 - AluJb SINE Alu -14 288 1 254 248 0 90 chr2 32707796 32707851 -217980003 - L1MC5 LINE L1 -36 7925 7867 2314 88 0 3 chr2 32707851 32708147 -217979707 - AluY SINE Alu -16 295 1 254 248 0 90 chr2 32708147 32708224 -217979630 - L1MC5 LINE L1 -94 7867 7805 961 233 48 0 chr2 32708225 32708431 -217979423 + MER58A DNA MER1_type 1 216 -8 1019 200 133 78 chr2 32708447 32709088 -217978766 - L1MC5 LINE L1 -160 7801 7126 191 324 0 0 chr2 32709260 32709328 -217978526 + MIR SINE MIR 79 146 -62 1850 112 20 0 chr2 32709329 32709624 -217978230 - AluSq SINE Alu 0 327 28 2458 69 0 7 chr2 32709625 32709929 -217977925 + AluY SINE Alu 1 302 -9 310 107 0 0 chr2 32709947 32710004 -217977850 - AluSq SINE Alu -262 40 2 2167 105 7 3 chr2 32710800 32711094 -217976760 + AluSx SINE Alu 1 295 -17 2416 58 0 32 chr2 32711095 32711408 -217976446 + AluYa5 SINE Alu 2 304 -7 1063 169 0 0 chr2 32711408 32711574 -217976280 + AluSg/x SINE Alu 135 300 -12 490 250 82 69 chr2 32711582 32711814 -217976040 + L2 LINE L2 3078 3312 -1 190 328 0 0 chr2 32711823 32711881 -217975973 + L2 LINE L2 3210 3267 -5 24 0 0 0 chr2 32711887 32711911 -217975943 + AT_rich Low_complexity Low_complexity 1 24 0 1110 105 0 0 chr2 32712296 32712439 -217975415 - AluSg/x SINE Alu -15 295 153 1506 252 76 47 chr2 32712449 32712762 -217975092 - L2 LINE L2 -234 3079 2725 2201 105 3 10 chr2 32712762 32713058 -217974796 + AluSx SINE Alu 1 294 -18 1506 252 76 47 chr2 32713058 32713298 -217974556 - L2 LINE L2 -588 2725 2493 1862 167 0 22 chr2 32713524 32713836 -217974018 + AluJo SINE Alu 1 305 -7 372 277 30 77 chr2 32713896 32714131 -217973723 - L2 LINE L2 -440 2874 2651 2218 112 0 0 chr2 32714229 32714525 -217973329 + AluSx SINE Alu 3 298 -14 2275 101 0 16 chr2 32715756 32716072 -217971782 - AluY SINE Alu 0 311 1 1632 181 15 0 chr2 32716259 32716529 -217971325 + AluJo SINE Alu 2 275 -37 27 49 0 0 chr2 32716696 32716737 -217971117 + AT_rich Low_complexity Low_complexity 1 41 0 211 220 0 0 chr2 32716802 32716852 -217971002 + T-rich Low_complexity Low_complexity 1 50 0 1785 122 104 6 chr2 32717607 32717934 -217969920 - L1MA5A LINE L1 -1 6296 5938 2693 98 16 5 chr2 32717937 32718365 -217969489 - L1MA5A LINE L1 -491 5806 5374 38474 69 7 4 chr2 32718542 32724658 -217963196 - L1PA5 LINE L1 -7 6147 11 1266 139 20 62 chr2 32725258 32725315 -217962539 + MER46A DNA MER2_type 1 59 -2672 1898 135 0 64 chr2 32725315 32725627 -217962227 - AluSx SINE Alu -20 292 1 1266 139 20 62 chr2 32725627 32725813 -217962041 + MER46A DNA MER2_type 59 234 -2 849 201 142 24 chr2 32726029 32726408 -217961446 + L1M4b LINE L1 1339 1747 -5108 280 283 33 0 chr2 32726495 32726587 -217961267 + L1ME1 LINE L1 6026 6120 -46 306 135 0 0 chr2 32726595 32726647 -217961207 - AluJb SINE Alu -7 295 244 1047 170 6 0 chr2 32726654 32726825 -217961029 - AluJb SINE Alu -140 172 1 2213 102 7 3 chr2 32726833 32727136 -217960718 - AluSc SINE Alu -5 304 1 2138 122 7 0 chr2 32727187 32727483 -217960371 - AluSx SINE Alu -14 298 1 440 251 36 109 chr2 32727493 32727740 -217960114 - HAL1 LINE L1 -48 2459 2231 21 36 0 0 chr2 32727740 32727768 -217960086 + AT_rich Low_complexity Low_complexity 1 28 0 491 215 0 18 chr2 32727796 32727959 -217959895 + (TA)n Simple_repeat Simple_repeat 1 160 0 309 270 0 22 chr2 32727966 32728055 -217959799 + L1MC4 LINE L1 6614 6700 -1342 236 217 0 12 chr2 32728086 32728169 -217959685 + (TA)n Simple_repeat Simple_repeat 1 82 0 2314 103 0 3 chr2 32728181 32728492 -217959362 - AluSg SINE Alu 0 310 1 362 133 33 56 chr2 32728548 32728728 -217959126 + (TATATG)n Simple_repeat Simple_repeat 5 180 0 * 605 95 62 56 chr2 32728697 32729053 -217958801 + (TATAG)n Simple_repeat Simple_repeat 1 358 0 361 124 0 114 chr2 32729135 32729336 -217958518 + (TA)n Simple_repeat Simple_repeat 1 178 0 270 110 55 71 chr2 32729357 32729539 -217958315 + (TATAG)n Simple_repeat Simple_repeat 2 180 0 302 229 92 28 chr2 32729739 32729848 -217958006 - L1MDa LINE L1 -4501 2039 1924 40 37 0 0 chr2 32729989 32730043 -217957811 + AT_rich Low_complexity Low_complexity 1 54 0 387 0 0 0 chr2 32730045 32730088 -217957766 + (TAG)n Simple_repeat Simple_repeat 1 43 0 1636 138 0 0 chr2 32730103 32730327 -217957527 - AluSx SINE Alu -88 224 1 357 129 0 0 chr2 32730327 32730389 -217957465 - L1MA1 LINE L1 -182 6120 6059 2283 114 0 0 chr2 32730421 32730720 -217957134 - AluSg SINE Alu -11 299 1 1440 141 173 0 chr2 32731210 32731459 -217956395 - AluJb SINE Alu -20 292 1 2319 108 0 3 chr2 32731635 32731940 -217955914 - AluSx SINE Alu -7 305 2 1136 108 0 0 chr2 32732007 32732165 -217955689 - AluSc SINE Alu 0 309 152 1518 159 51 48 chr2 32732197 32732492 -217955362 + AluJo SINE Alu 1 296 -16 26 50 0 0 chr2 32732591 32732631 -217955223 + AT_rich Low_complexity Low_complexity 1 40 0 2353 59 39 0 chr2 32733032 32733318 -217954536 - AluSp SINE Alu -12 301 5 28 29 0 0 chr2 32733430 32733465 -217954389 + AT_rich Low_complexity Low_complexity 1 35 0 27 49 0 0 chr2 32733931 32733972 -217953882 + AT_rich Low_complexity Low_complexity 1 41 0 1900 166 0 17 chr2 32734539 32734841 -217953013 - AluSx SINE Alu -15 297 1 1105 139 6 0 chr2 32734885 32735051 -217952803 + AluSg/x SINE Alu 124 290 -20 2362 76 20 10 chr2 32735053 32735357 -217952497 + AluSc SINE Alu 1 307 -2 24 0 0 0 chr2 32735360 32735384 -217952470 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 32735535 32735560 -217952294 + AT_rich Low_complexity Low_complexity 1 25 0 2003 159 0 0 chr2 32735603 32735905 -217951949 - AluSq SINE Alu -10 303 2 252 232 0 63 chr2 32736298 32736393 -217951461 + MER113 DNA MER1_type? 6 94 -427 347 274 145 8 chr2 32736661 32736785 -217951069 - MIR3 SINE MIR -8 200 60 507 168 88 18 chr2 32738089 32738202 -217949652 - FLAM_A SINE Alu 0 142 22 1144 256 78 44 chr2 32738460 32739192 -217948662 - HAL1 LINE L1 -379 2128 1372 2027 96 44 0 chr2 32739244 32739515 -217948339 - AluSq SINE Alu -30 283 1 2339 97 0 10 chr2 32739610 32739918 -217947936 - AluSx SINE Alu -7 305 1 727 308 60 39 chr2 32739918 32740350 -217947504 - HAL1 LINE L1 -1484 1023 583 2288 121 0 0 chr2 32740388 32740694 -217947160 - AluSx SINE Alu -4 308 3 816 148 0 23 chr2 32740737 32740865 -217946989 + FLAM_C SINE Alu 6 130 -13 5670 187 29 22 chr2 32740873 32741055 -217946799 + L1MC2 LINE L1 4199 4378 -1966 2404 82 0 0 chr2 32741055 32741347 -217946507 + AluSx SINE Alu 2 293 -19 5670 187 29 22 chr2 32741347 32743281 -217944573 + L1MC2 LINE L1 4378 6331 -13 2348 92 3 13 chr2 32743281 32743596 -217944258 - AluSp SINE Alu 0 313 2 411 292 105 50 chr2 32743687 32743864 -217943990 - HAL1 LINE L1 -1970 537 371 2252 54 0 37 chr2 32743864 32744179 -217943675 - AluY SINE Alu 0 304 1 411 292 105 50 chr2 32744179 32744504 -217943350 - HAL1 LINE L1 -2136 371 6 1862 161 9 25 chr2 32744544 32744860 -217942994 - AluJb SINE Alu -1 311 1 213 0 81 0 chr2 32745215 32745252 -217942602 + T-rich Low_complexity Low_complexity 1 40 0 1618 146 0 0 chr2 32745253 32745492 -217942362 - AluSx SINE Alu -73 239 1 2101 141 6 6 chr2 32746057 32746369 -217941485 - AluSx SINE Alu 0 312 1 2135 163 87 18 chr2 32746739 32747176 -217940678 - MLT1C LTR MaLR 0 467 1 846 140 7 29 chr2 32747327 32747463 -217940391 - FLAM_C SINE Alu 0 133 1 2025 139 3 3 chr2 32747791 32748085 -217939769 + AluJb SINE Alu 1 294 -18 1702 179 7 3 chr2 32748092 32748388 -217939466 + AluJo SINE Alu 5 301 -11 2348 102 0 0 chr2 32748511 32748814 -217939040 + AluSx SINE Alu 1 303 -9 370 310 99 107 chr2 32749199 32749583 -217938271 + L2 LINE L2 2886 3266 -6 345 270 71 40 chr2 32749588 32749714 -217938140 - MIR SINE MIR -95 167 38 2117 96 45 0 chr2 32749741 32750033 -217937821 - AluSc SINE Alu -4 305 1 2003 149 0 10 chr2 32750182 32750490 -217937364 + AluJb SINE Alu 1 305 -7 229 307 339 7 chr2 32750501 32750775 -217937079 - L3 LINE CR1 -160 1417 1053 1874 76 30 142 chr2 32750802 32751132 -217936722 + AluSp SINE Alu 2 294 -19 873 254 34 65 chr2 32751302 32751657 -217936197 - L1ME3A LINE L1 -2 6168 5825 200 299 15 0 chr2 32751878 32751945 -217935909 + L2 LINE L2 3173 3240 -73 1727 132 3 107 chr2 32752119 32752295 -217935559 - AluJb SINE Alu -10 292 164 1830 90 0 4 chr2 32752295 32752529 -217935325 + AluSg SINE Alu 1 233 -77 1727 132 3 107 chr2 32752529 32752678 -217935176 - AluJb SINE Alu -138 164 1 357 263 86 59 chr2 32752742 32752774 -217935080 + MIR3 SINE MIR 34 64 -144 2203 108 0 3 chr2 32752774 32753070 -217934784 - AluSx SINE Alu -17 295 1 357 263 86 59 chr2 32753070 32753189 -217934665 + MIR3 SINE MIR 64 189 -19 270 0 0 0 chr2 32753193 32753223 -217934631 + (TG)n Simple_repeat Simple_repeat 1 30 0 2360 54 0 0 chr2 32753223 32753503 -217934351 - AluY SINE Alu -31 280 1 686 133 0 0 chr2 32753745 32753843 -217934011 + AluSq SINE Alu 1 98 -214 1515 133 5 0 chr2 32753963 32754181 -217933673 + AluSq SINE Alu 94 312 -1 460 259 80 14 chr2 32755582 32755794 -217932060 - HAL1b LINE L1 -750 598 373 4156 149 41 37 chr2 32755829 32757339 -217930515 - L1PA16 LINE L1 -104 6062 4544 1512 226 0 41 chr2 32757339 32757620 -217930234 + L1 LINE L1 4136 4394 -1752 2389 82 0 16 chr2 32757620 32757937 -217929917 + AluSx SINE Alu 1 312 0 1512 226 0 41 chr2 32757937 32758092 -217929762 + L1 LINE L1 4394 4554 -1592 1599 137 29 4 chr2 32758468 32758709 -217929145 + AluSx SINE Alu 54 300 -12 613 156 74 25 chr2 32758715 32758837 -217929017 + AluJb SINE Alu 1 128 -184 42 0 0 0 chr2 32758843 32758885 -217928969 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 32759018 32759041 -217928813 + AT_rich Low_complexity Low_complexity 1 23 0 240 150 0 0 chr2 32760065 32760105 -217927749 - L1M4 LINE L1 -1584 4562 4523 * 1675 234 50 27 chr2 32760102 32760481 -217927373 + L1ME1 LINE L1 5551 5951 -215 2017 93 62 7 chr2 32760481 32760770 -217927084 - AluSc SINE Alu -4 305 1 1675 234 50 27 chr2 32760770 32760988 -217926866 + L1ME1 LINE L1 5951 6162 -4 1961 146 7 10 chr2 32761060 32761361 -217926493 + AluJo SINE Alu 3 302 -10 23 68 0 0 chr2 32761522 32761566 -217926288 + AT_rich Low_complexity Low_complexity 1 44 0 228 145 18 2 chr2 32761784 32761950 -217925904 + AluJb SINE Alu 86 290 -12 37 23 0 0 chr2 32762032 32762076 -217925778 + AT_rich Low_complexity Low_complexity 1 44 0 1990 128 17 10 chr2 32762678 32762967 -217924887 + AluSp SINE Alu 1 291 -22 1984 135 3 20 chr2 32763168 32763471 -217924383 - AluJb SINE Alu -14 298 1 312 167 0 0 chr2 32763473 32763521 -217924333 - MER58 DNA MER1_type -133 82 35 1634 173 0 33 chr2 32764351 32764657 -217923197 + AluJo SINE Alu 1 296 -16 2280 84 44 0 chr2 32764659 32764955 -217922899 + AluSg SINE Alu 1 309 -1 225 0 0 0 chr2 32765420 32765445 -217922409 + (T)n Simple_repeat Simple_repeat 1 25 0 1637 131 25 0 chr2 32765454 32765691 -217922163 - AluSx SINE Alu -69 243 1 2388 57 0 0 chr2 32765693 32766005 -217921849 - AluY SINE Alu 0 312 1 1544 176 4 11 chr2 32766005 32766283 -217921571 - AluJb SINE Alu -11 301 26 2248 100 0 17 chr2 32766464 32766602 -217921252 + AluSx SINE Alu 1 140 -172 2454 54 0 7 chr2 32766602 32766900 -217920954 + AluY SINE Alu 1 296 -15 2248 100 0 17 chr2 32766900 32767061 -217920793 + AluSx SINE Alu 140 295 -17 2086 100 3 41 chr2 32767153 32767472 -217920382 - AluSx SINE Alu -5 307 1 2059 152 52 6 chr2 32767618 32767947 -217919907 - MER2 DNA MER2_type 0 344 1 2193 84 0 75 chr2 32768133 32768465 -217919389 - AluSc SINE Alu -2 307 1 252 77 0 0 chr2 32768488 32768527 -217919327 + (TTTAA)n Simple_repeat Simple_repeat 3 41 0 1660 169 26 0 chr2 32768527 32768800 -217919054 - AluJo SINE Alu -27 285 6 2249 89 7 0 chr2 32769026 32769317 -217918537 - AluSp SINE Alu -20 293 1 266 196 59 0 chr2 32769409 32769460 -217918394 + MIR SINE MIR 188 241 -21 2258 102 0 7 chr2 32769702 32770007 -217917847 + AluSx SINE Alu 1 303 -9 1754 140 54 7 chr2 32770360 32770639 -217917215 + AluJb SINE Alu 1 292 -20 1944 153 0 3 chr2 32770829 32771123 -217916731 - AluJb SINE Alu -19 293 1 2306 77 34 3 chr2 32771393 32771690 -217916164 - AluSq SINE Alu -7 306 1 1690 116 0 0 chr2 32771869 32772093 -217915761 + AluSx SINE Alu 1 224 -88 227 183 161 11 chr2 32772095 32772188 -217915666 + L1ME4a LINE L1 6012 6118 -3 2518 61 7 0 chr2 32774115 32774411 -217913443 - AluSp SINE Alu -15 298 1 587 322 60 48 chr2 32775801 32775908 -217911946 + L1ME LINE L1 406 510 -5906 1281 184 53 70 chr2 32775908 32776207 -217911647 + AluJo SINE Alu 1 294 -18 587 322 60 48 chr2 32776207 32776562 -217911292 + L1ME LINE L1 510 874 -5542 2225 99 22 2 chr2 32777067 32777660 -217910194 + AluY SINE Alu 1 286 -25 1006 257 111 37 chr2 32777660 32778256 -217909598 + L1ME LINE L1 1212 1851 -4756 804 154 91 34 chr2 32778258 32778433 -217909421 + AluJb SINE Alu 2 186 -126 298 262 64 50 chr2 32778437 32778578 -217909276 + L1ME LINE L1 1733 1875 -4551 839 283 77 25 chr2 32778622 32779053 -217908801 + L1ME LINE L1 1957 2409 -4198 852 113 32 118 chr2 32779124 32779310 -217908544 - FRAM SINE Alu -6 170 1 1237 214 46 0 chr2 32779344 32779582 -217908272 - MER68 LTR ERV1 -10 552 304 629 154 77 8 chr2 32779593 32779710 -217908144 - MER68 LTR ERV1 -411 151 27 1734 238 81 20 chr2 32780011 32780132 -217907722 + L1MC4 LINE L1 6515 6627 -1415 2146 124 0 0 chr2 32780132 32780423 -217907431 + AluSx SINE Alu 1 291 -21 1734 238 81 20 chr2 32780423 32780574 -217907280 + L1MC4 LINE L1 6627 6767 -1275 2072 196 22 5 chr2 32780574 32780942 -217906912 - MLT1A2 LTR MaLR 0 374 1 1734 238 81 20 chr2 32780942 32781210 -217906644 + L1MC4 LINE L1 6767 7089 -953 1279 109 0 0 chr2 32781262 32781427 -217906427 + AluSx SINE Alu 1 165 -147 472 216 8 72 chr2 32781460 32781527 -217906327 + MIR SINE MIR 142 212 -50 2214 102 31 0 chr2 32781527 32781821 -217906033 - AluSg SINE Alu -7 303 1 2008 110 68 0 chr2 32781821 32782101 -217905753 - AluSq SINE Alu -13 300 1 472 216 8 72 chr2 32782101 32782157 -217905697 + MIR SINE MIR 210 258 -4 819 167 0 0 chr2 32782158 32782284 -217905570 + FLAM_C SINE Alu 1 126 -7 2104 118 3 3 chr2 32782345 32782649 -217905205 - AluSg SINE Alu -1 309 6 1521 146 175 10 chr2 32782674 32782983 -217904871 + MER46B DNA MER2_type 1 235 -1 2402 62 3 0 chr2 32783286 32783578 -217904276 - AluSx SINE Alu -18 294 2 180 206 304 11 chr2 32783581 32783673 -217904181 + MIR SINE MIR 94 212 -50 207 360 87 27 chr2 32784998 32785148 -217902706 + L2 LINE L2 2682 2840 -474 2358 76 3 0 chr2 32785148 32785449 -217902405 - AluSp SINE Alu -11 302 1 22 0 0 0 chr2 32785457 32785479 -217902375 + AT_rich Low_complexity Low_complexity 1 22 0 395 333 58 0 chr2 32785982 32786120 -217901734 + L2 LINE L2 3115 3260 -12 37 0 0 0 chr2 32786395 32786432 -217901422 + AT_rich Low_complexity Low_complexity 1 37 0 48 32 0 0 chr2 32786486 32786548 -217901306 + AT_rich Low_complexity Low_complexity 1 62 0 220 338 80 35 chr2 32786805 32787006 -217900848 - L2 LINE L2 -404 2910 2701 302 215 0 15 chr2 32787187 32787252 -217900602 - L1MC4 LINE L1 -1338 6704 6641 1532 184 23 27 chr2 32787252 32787551 -217900303 - AluJb SINE Alu -14 298 1 1465 57 0 6 chr2 32787571 32787746 -217900108 + AluY SINE Alu 1 174 -137 1914 148 0 0 chr2 32788682 32788960 -217898894 - AluSx SINE Alu -21 291 14 632 250 230 5 chr2 32789077 32789273 -217898581 + MIR SINE MIR 20 259 -3 2517 80 0 3 chr2 32789755 32790068 -217897786 - AluSp SINE Alu -1 312 1 200 323 215 0 chr2 32790201 32790294 -217897560 + L2 LINE L2 3150 3262 -10 2231 284 107 38 chr2 32790337 32790454 -217897400 + L2 LINE L2 935 1042 -2272 849 188 0 0 chr2 32790454 32790587 -217897267 - FLAM_A SINE Alu 0 133 1 2231 284 107 38 chr2 32790587 32791422 -217896432 + L2 LINE L2 1042 1953 -1361 2036 112 31 3 chr2 32791450 32791736 -217896118 - AluSg SINE Alu -14 296 3 268 256 0 13 chr2 32791766 32791844 -217896010 - L1MC4 LINE L1 -64 7978 7902 23 68 0 0 chr2 32792405 32792449 -217895405 + AT_rich Low_complexity Low_complexity 1 44 0 842 154 0 0 chr2 32792450 32792567 -217895287 - FLAM_C SINE Alu -16 117 1 2400 89 0 0 chr2 32792623 32792926 -217894928 - AluSc SINE Alu -6 303 1 757 150 144 0 chr2 32793487 32793660 -217894194 + L1MB8 LINE L1 5774 5971 -207 2039 115 18 0 chr2 32793771 32794057 -217893797 + AluSq SINE Alu 4 294 -19 597 272 60 34 chr2 32794161 32794426 -217893428 + L1MC4a LINE L1 5254 5525 -2283 2293 96 0 3 chr2 32794451 32794744 -217893110 + AluSg SINE Alu 1 292 -18 953 173 113 118 chr2 32794745 32794847 -217893007 - L1MB8 LINE L1 -10 6168 6067 2242 120 0 0 chr2 32794847 32795147 -217892707 - AluSx SINE Alu -12 300 1 953 173 113 118 chr2 32795147 32795390 -217892464 - L1MB8 LINE L1 -111 6067 5825 1752 130 93 4 chr2 32795394 32795663 -217892191 - AluSx SINE Alu -16 296 4 1671 138 11 81 chr2 32795672 32795725 -217892129 - L1MB8 LINE L1 -1094 5052 4997 1449 168 113 7 chr2 32795725 32795999 -217891855 - AluSg1 SINE Alu -2 307 5 1671 138 11 81 chr2 32795999 32796019 -217891835 - L1MB8 LINE L1 -1149 4997 4977 2622 53 0 0 chr2 32796019 32796321 -217891533 - AluY SINE Alu -9 302 1 1671 138 11 81 chr2 32796321 32796466 -217891388 - L1MB8 LINE L1 -1169 4977 4867 1949 152 3 16 chr2 32796466 32796776 -217891078 + AluSx SINE Alu 1 306 -6 1671 138 11 81 chr2 32796776 32796926 -217890928 - L1MB8 LINE L1 -1279 4867 4708 1336 215 26 49 chr2 32796926 32797233 -217890621 - AluJb SINE Alu -1 301 2 791 203 129 34 chr2 32797234 32797507 -217890347 + L1MC4a LINE L1 5511 5800 -321 792 204 62 12 chr2 32797507 32797669 -217890185 - MER5A DNA MER1_type -7 182 13 375 222 0 11 chr2 32797739 32797829 -217890025 + L1MC4a LINE L1 5871 5959 -1849 25 18 0 73 chr2 32797977 32798032 -217889822 + AT_rich Low_complexity Low_complexity 1 51 0 829 204 7 0 chr2 32798051 32798193 -217889661 + FRAM SINE Alu 1 143 -33 1712 157 16 46 chr2 32798194 32798500 -217889354 + AluJo SINE Alu 1 297 -15 2114 122 0 13 chr2 32798503 32798807 -217889047 - AluSx SINE Alu -12 300 1 644 260 28 11 chr2 32799328 32799505 -217888349 - MER104 DNA MER2_type 0 180 1 2028 123 3 7 chr2 32799659 32799952 -217887902 + AluSx SINE Alu 1 292 -20 1866 166 3 10 chr2 32799998 32800312 -217887542 - AluJo SINE Alu 0 312 1 2268 93 0 0 chr2 32800982 32801271 -217886583 + AluSg SINE Alu 1 289 -21 2223 104 0 23 chr2 32801474 32801781 -217886073 + AluSx SINE Alu 1 300 -12 32 43 0 0 chr2 32802192 32802238 -217885616 + AT_rich Low_complexity Low_complexity 1 46 0 2235 117 0 0 chr2 32802559 32802857 -217884997 + AluSx SINE Alu 1 298 -14 1498 176 60 14 chr2 32803163 32803447 -217884407 + AluJo SINE Alu 1 297 -15 2099 109 0 42 chr2 32803792 32804105 -217883749 - AluSx SINE Alu -10 302 3 1215 209 8 0 chr2 32804107 32804346 -217883508 - AluSg/x SINE Alu -6 306 66 2214 103 0 20 chr2 32804480 32804781 -217883073 + AluSx SINE Alu 1 295 -17 1719 162 10 3 chr2 32804800 32805102 -217882752 + AluSx SINE Alu 9 312 0 868 310 218 25 chr2 32805625 32806333 -217881521 + L2 LINE L2 2189 3031 -282 1835 138 65 0 chr2 32806488 32806764 -217881090 + AluSx SINE Alu 1 294 -18 682 253 125 19 chr2 32806807 32807351 -217880503 - L1ME2 LINE L1 -44 6120 5635 2183 131 0 16 chr2 32807351 32807665 -217880189 - AluSx SINE Alu -3 309 1 1632 163 37 10 chr2 32807665 32807965 -217879889 - AluJo SINE Alu -4 308 1 682 253 125 19 chr2 32807965 32808241 -217879613 - L1ME2 LINE L1 -529 5635 5390 2266 111 0 0 chr2 32808241 32808538 -217879316 + AluSx SINE Alu 1 297 -15 682 253 125 19 chr2 32808538 32808735 -217879119 - L1ME2 LINE L1 -774 5390 5215 1734 112 16 4 chr2 32808735 32808986 -217878868 - AluSx SINE Alu -58 254 1 682 253 125 19 chr2 32808986 32809261 -217878593 - L1ME2 LINE L1 -949 5215 4606 531 261 100 56 chr2 32809663 32809807 -217878047 + MIR SINE MIR 2 163 -99 829 139 0 36 chr2 32809807 32809944 -217877910 + FLAM_A SINE Alu 1 132 -1 531 261 100 56 chr2 32809944 32810048 -217877806 + MIR SINE MIR 163 261 -1 278 196 0 0 chr2 32810132 32810178 -217877676 - LTR51 LTR ERV1 -49 622 577 21 0 0 0 chr2 32810952 32810973 -217876881 + AT_rich Low_complexity Low_complexity 1 21 0 816 123 0 0 chr2 32811378 32811484 -217876370 + FLAM_C SINE Alu 24 129 -14 782 224 144 50 chr2 32813013 32813162 -217874692 - L1ME4a LINE L1 -70 6051 5918 1745 104 123 8 chr2 32813162 32813430 -217874424 - AluSg1 SINE Alu -10 299 1 782 224 144 50 chr2 32813430 32813745 -217874109 - L1ME4a LINE L1 -203 5918 5543 828 162 0 14 chr2 32813764 32813906 -217873948 - FLAM_C SINE Alu -3 140 1 780 200 0 0 chr2 32813968 32814093 -217873761 + FLAM_A SINE Alu 1 125 -8 2165 118 7 7 chr2 32814097 32814402 -217873452 + AluSq SINE Alu 1 305 -8 324 203 165 0 chr2 32814439 32814518 -217873336 - MIR SINE MIR -16 246 155 1141 198 19 0 chr2 32814568 32814780 -217873074 - MER46A DNA MER2_type -1 235 20 2265 93 3 0 chr2 32814844 32815135 -217872719 + AluSq SINE Alu 2 293 -20 22 0 0 0 chr2 32815316 32815338 -217872516 + AT_rich Low_complexity Low_complexity 1 22 0 188 281 49 24 chr2 32815988 32816070 -217871784 + MIR3 SINE MIR 79 162 -46 2555 157 43 81 chr2 32816618 32816657 -217871197 - L1MB3 LINE L1 -2 6181 6142 1951 102 0 0 chr2 32816657 32816902 -217870952 - AluSq SINE Alu -22 291 47 2555 157 43 81 chr2 32816902 32817467 -217870387 - L1MB3 LINE L1 -41 6142 5600 1972 79 54 4 chr2 32817481 32817760 -217870094 - L1MA3 LINE L1 0 6305 6013 21 0 0 0 chr2 32817876 32817897 -217869957 + AT_rich Low_complexity Low_complexity 1 21 0 1601 128 0 0 chr2 32817897 32818116 -217869738 + AluSx SINE Alu 1 219 -93 180 111 0 0 chr2 32818134 32818161 -217869693 + (CA)n Simple_repeat Simple_repeat 2 28 0 247 113 0 99 chr2 32818167 32818238 -217869616 + LTR66 LTR ERVL 402 465 -145 201 331 98 65 chr2 32818260 32818411 -217869443 + L2 LINE L2 2592 2756 -558 4527 22 41 0 chr2 32818411 32818927 -217868927 + SVA Other Other 863 1398 0 201 331 98 65 chr2 32818927 32819019 -217868835 + L2 LINE L2 2756 2844 -470 234 196 0 0 chr2 32819750 32819796 -217868058 - MER46C DNA MER2_type -292 46 1 2073 77 52 7 chr2 32820396 32820695 -217867159 - AluY SINE Alu 0 311 1 33 0 0 23 chr2 32822847 32822876 -217864978 + AT_rich Low_complexity Low_complexity 1 30 -13 1822 176 7 3 chr2 32822876 32823178 -217864676 - AluJb SINE Alu -9 303 1 33 0 0 23 chr2 32823178 32823192 -217864662 + AT_rich Low_complexity Low_complexity 30 43 0 2277 85 3 7 chr2 32823204 32823497 -217864357 + AluSg SINE Alu 1 292 -18 2156 126 0 7 chr2 32823725 32824035 -217863819 - AluSx SINE Alu -4 308 1 2322 73 17 0 chr2 32824231 32824518 -217863336 + AluY SINE Alu 1 292 -19 2090 83 6 80 chr2 32825287 32825444 -217862410 - AluSc SINE Alu -20 289 122 2257 105 3 0 chr2 32825444 32825739 -217862115 - AluSg SINE Alu -14 296 1 2090 83 6 80 chr2 32825739 32825758 -217862096 - AluSc SINE Alu -187 122 103 2437 85 3 0 chr2 32825758 32826064 -217861790 - AluSg SINE Alu -3 307 1 2090 83 6 80 chr2 32826064 32826198 -217861656 - AluSc SINE Alu -206 103 1 2269 114 0 0 chr2 32826200 32826497 -217861357 - AluSx SINE Alu -15 297 1 24 0 0 0 chr2 32826505 32826529 -217861325 + AT_rich Low_complexity Low_complexity 1 24 0 879 128 0 0 chr2 32826529 32826646 -217861208 - FLAM_C SINE Alu -16 117 1 321 145 0 72 chr2 32826657 32826726 -217861128 - Alu SINE Alu -5 297 234 907 136 21 14 chr2 32826737 32826877 -217860977 - AluSq/x SINE Alu -171 141 1 591 172 0 0 chr2 32827787 32827880 -217859974 - FLAM SINE Alu -13 130 38 292 244 105 20 chr2 32828188 32828293 -217859561 - L1ME4a LINE L1 -47 6074 5979 2325 105 3 13 chr2 32828293 32828608 -217859246 + AluSx SINE Alu 1 312 0 292 244 105 20 chr2 32828608 32828702 -217859152 - L1ME4a LINE L1 -142 5979 5818 2425 147 31 41 chr2 32828904 32829319 -217858535 - LTR57 LTR ERVL 0 411 1 565 272 98 78 chr2 32829327 32829665 -217858189 - HAL1b LINE L1 -737 611 256 2307 108 0 6 chr2 32829665 32829979 -217857875 - AluSx SINE Alu 0 312 1 565 272 98 78 chr2 32829979 32830180 -217857674 - HAL1b LINE L1 -1092 256 61 2127 119 13 16 chr2 32830643 32830953 -217856901 - AluSx SINE Alu -2 310 2 1779 152 13 23 chr2 32830954 32831257 -217856597 - AluJo SINE Alu -12 300 1 240 268 52 0 chr2 32831723 32831820 -217856034 - L1ME4a LINE L1 -295 5826 5725 1056 108 0 0 chr2 32831846 32831985 -217855869 - AluSg SINE Alu -4 306 168 747 100 0 0 chr2 32831985 32832110 -217855744 + ALR/Alpha Satellite centromeric 1 125 -65 1149 120 0 34 chr2 32832110 32832285 -217855569 - AluSg SINE Alu -141 169 1 435 279 29 0 chr2 32832285 32832425 -217855429 - L1ME4a LINE L1 -415 5706 5563 27 0 0 0 chr2 32832480 32832507 -217855347 + AT_rich Low_complexity Low_complexity 1 27 0 887 85 0 0 chr2 32832507 32832613 -217855241 - U6 snRNA snRNA -1 106 1 1970 157 0 6 chr2 32833232 32833545 -217854309 - AluJb SINE Alu -1 311 1 38 0 0 0 chr2 32833548 32833586 -217854268 + AT_rich Low_complexity Low_complexity 1 38 0 191 86 0 29 chr2 32833730 32833765 -217854089 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1084 209 50 0 chr2 32833768 32833988 -217853866 - AluJo SINE Alu -24 288 58 3118 116 34 50 chr2 32834019 32834308 -217853546 - L1P4 LINE L1 -415 5751 5459 2179 100 7 0 chr2 32834308 32834629 -217853225 + AluSx SINE Alu 1 323 0 3118 116 34 50 chr2 32834629 32834947 -217852907 - L1P4 LINE L1 -707 5459 5149 1166 277 10 37 chr2 32834947 32835247 -217852607 - AluSq SINE Alu -10 293 2 3118 116 34 50 chr2 32835247 32835270 -217852584 - L1P4 LINE L1 -1017 5149 5127 * 3539 175 11 0 chr2 32835250 32835889 -217851965 - L1 LINE L1 -1125 5021 4376 1278 128 32 41 chr2 32835891 32836110 -217851744 - AluJb SINE Alu -11 301 85 995 129 0 0 chr2 32836188 32836328 -217851526 + FLAM_C SINE Alu 1 140 -3 414 0 0 0 chr2 32836570 32836616 -217851238 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 2119 118 0 0 chr2 32836616 32836895 -217850959 - AluSx SINE Alu -32 280 2 236 250 0 12 chr2 32837082 32837112 -217850742 + CT-rich Low_complexity Low_complexity 2 31 -53 1993 95 0 11 chr2 32837112 32837375 -217850479 - AluSx SINE Alu -52 260 1 236 250 0 12 chr2 32837375 32837428 -217850426 + CT-rich Low_complexity Low_complexity 31 84 0 2243 113 0 3 chr2 32837474 32837775 -217850079 - AluSx SINE Alu -12 300 1 275 149 0 0 chr2 32839148 32839195 -217848659 - L1MC3 LINE L1 -159 7626 7580 2338 93 7 7 chr2 32839195 32839497 -217848357 - AluSg SINE Alu -8 302 1 404 271 97 84 chr2 32841394 32841549 -217846305 + MIR3 SINE MIR 16 172 -36 183 269 58 0 chr2 32842206 32842258 -217845596 - L2 LINE L2 -4 3309 3255 21 0 0 0 chr2 32842837 32842858 -217844996 + AT_rich Low_complexity Low_complexity 1 21 0 228 35 0 0 chr2 32843448 32843477 -217844377 + (TG)n Simple_repeat Simple_repeat 2 30 0 2338 93 10 0 chr2 32844629 32844930 -217842924 + AluSp SINE Alu 1 304 -9 888 229 182 39 chr2 32844930 32845363 -217842491 + MLT1J LTR MaLR 2 496 -15 417 252 81 0 chr2 32846064 32846187 -217841667 - L2 LINE L2 -1 3271 3139 592 266 153 62 chr2 32846266 32846748 -217841106 + HAL1 LINE L1 590 1115 -1392 1735 144 25 14 chr2 32846799 32847083 -217840771 - AluSx SINE Alu -11 301 15 1181 141 6 0 chr2 32847179 32847342 -217840512 + AluSx SINE Alu 1 164 -148 411 171 0 26 chr2 32847356 32847432 -217840422 + AluSx SINE Alu 142 215 -95 445 97 32 0 chr2 32847447 32847509 -217840345 + AluSp/q SINE Alu 205 268 -45 531 300 238 31 chr2 32847580 32848184 -217839670 - L2 LINE L2 -1059 2255 1527 535 133 0 0 chr2 32848420 32848495 -217839359 - AluS SINE Alu -237 76 2 1228 128 0 0 chr2 32848503 32848675 -217839179 - AluSg/x SINE Alu -12 298 127 2360 153 35 59 chr2 32848678 32849185 -217838669 - L1M4 LINE L1 -394 5784 5266 2351 93 0 7 chr2 32849185 32849486 -217838368 - AluSg SINE Alu -11 299 1 2360 153 35 59 chr2 32849486 32849579 -217838275 - L1M4 LINE L1 -912 5266 5197 1699 160 32 51 chr2 32849579 32849892 -217837962 - AluJb SINE Alu -5 307 1 2141 168 13 5 chr2 32849892 32850284 -217837570 - L1MC3 LINE L1 -202 7583 7189 321 169 15 0 chr2 32850280 32850345 -217837509 - L1M4 LINE L1 -3160 2986 2921 * 574 326 57 27 chr2 32850665 32850999 -217836855 - L2 LINE L2 -2233 1081 738 853 154 67 0 chr2 32851000 32851149 -217836705 + FRAM SINE Alu 1 155 -21 554 130 0 20 chr2 32851160 32851260 -217836594 + (GGAA)n Simple_repeat Simple_repeat 1 98 0 2387 205 12 48 chr2 32851265 32851337 -217836517 - L1M4 LINE L1 -3155 2991 2918 270 0 0 0 chr2 32851337 32851367 -217836487 + (TA)n Simple_repeat Simple_repeat 2 31 0 834 185 0 15 chr2 32851367 32851502 -217836352 - FLAM_C SINE Alu 0 133 1 2387 205 12 48 chr2 32851502 32851993 -217835861 - L1M4 LINE L1 -3226 2920 2447 623 137 8 76 chr2 32852006 32852110 -217835744 + L1MB3 LINE L1 6040 6135 -48 2172 103 13 16 chr2 32852110 32852421 -217835433 + AluY SINE Alu 1 310 -1 623 137 8 76 chr2 32852421 32852447 -217835407 + L1MB3 LINE L1 6135 6161 -22 1115 175 256 0 chr2 32852643 32852917 -217834937 + MLT1F1 LTR MaLR 224 567 0 21 0 0 0 chr2 32853388 32853409 -217834445 + AT_rich Low_complexity Low_complexity 1 21 0 334 210 194 32 chr2 32853816 32854068 -217833786 - L1MC5 LINE L1 -26 7935 7643 411 296 0 0 chr2 32854724 32854822 -217833032 + MIR3 SINE MIR 81 178 -30 712 212 32 41 chr2 32854943 32855201 -217832653 + L1MEc LINE L1 2163 2384 -3831 2037 123 0 0 chr2 32857108 32857385 -217830469 + AluSx SINE Alu 1 277 -35 198 0 0 0 chr2 32857391 32857413 -217830441 + (GAAAA)n Simple_repeat Simple_repeat 3 24 0 324 318 23 23 chr2 32857413 32857538 -217830316 + MIR SINE MIR 134 261 -1 334 294 165 32 chr2 32857561 32857779 -217830075 + MIR SINE MIR 16 262 0 363 324 18 0 chr2 32857879 32857990 -217829864 + MIR3 SINE MIR 84 196 -12 2160 134 0 0 chr2 32858081 32858388 -217829466 - AluSx SINE Alu -3 309 3 180 0 0 0 chr2 32858511 32858531 -217829323 + (A)n Simple_repeat Simple_repeat 1 20 0 2607 61 0 6 chr2 32859474 32859787 -217828067 - AluY SINE Alu 0 311 1 1890 221 24 101 chr2 32859794 32860165 -217827689 + L1MEc LINE L1 2908 3189 -3026 868 137 0 0 chr2 32860165 32860282 -217827572 - FLAM_C SINE Alu -16 117 1 1890 221 24 101 chr2 32860282 32860693 -217827161 + L1MEc LINE L1 3189 3630 -2585 1437 183 15 201 chr2 32860725 32860874 -217826980 + L1MEc LINE L1 3617 3792 -2423 1572 207 0 3 chr2 32860874 32861169 -217826685 + AluJo SINE Alu 1 294 -18 1437 183 15 201 chr2 32861169 32861238 -217826616 + L1MEc LINE L1 3792 3872 -2343 2185 110 0 3 chr2 32861238 32861537 -217826317 + AluSg SINE Alu 1 298 -12 1437 183 15 201 chr2 32861537 32861632 -217826222 + L1MEc LINE L1 3872 3983 -2232 2319 82 14 0 chr2 32861632 32861925 -217825929 + AluSg SINE Alu 4 300 -10 1437 183 15 201 chr2 32861925 32862079 -217825775 + L1MEc LINE L1 3983 3853 -2362 1894 154 0 0 chr2 32862079 32862364 -217825490 + AluJo SINE Alu 3 287 -25 1437 183 15 201 chr2 32862364 32862763 -217825091 + L1MEc LINE L1 3852 4324 -1891 802 171 8 0 chr2 32862807 32862930 -217824924 + FLAM_C SINE Alu 2 125 -18 541 152 0 18 chr2 32862932 32863044 -217824810 + GA-rich Low_complexity Low_complexity 3 112 0 264 211 0 0 chr2 32863061 32863113 -217824741 + AluSp SINE Alu 135 186 -117 2316 108 0 3 chr2 32863137 32863443 -217824411 + AluSx SINE Alu 1 305 -7 3054 94 48 0 chr2 32863445 32863879 -217823975 + L1MA2 LINE L1 5850 6304 0 236 226 161 21 chr2 32863888 32863981 -217823873 + MIR SINE MIR 157 262 0 2235 107 0 0 chr2 32864011 32864300 -217823554 + AluSx SINE Alu 1 289 -23 332 296 113 6 chr2 32864368 32864527 -217823327 + L3 LINE CR1 1349 1524 -53 1311 186 107 18 chr2 32864887 32865167 -217822687 - AluJo SINE Alu -7 305 1 2179 77 4 7 chr2 32865411 32865685 -217822169 - AluSp SINE Alu -2 311 39 38 39 0 0 chr2 32865685 32865737 -217822117 + AT_rich Low_complexity Low_complexity 1 52 0 201 211 0 0 chr2 32865743 32865795 -217822059 + (TA)n Simple_repeat Simple_repeat 2 53 0 1895 115 45 0 chr2 32865945 32866258 -217821596 + L1PB4 LINE L1 5815 6152 -4 1868 143 39 7 chr2 32866340 32866647 -217821207 + MER49 LTR ERV1 1 317 -606 694 150 4 22 chr2 32866647 32866905 -217820949 + AluJ SINE Alu 1 309 -3 1635 147 35 57 chr2 32866905 32867219 -217820635 + MER49 LTR ERV1 308 614 -309 515 120 49 6 chr2 32867226 32867366 -217820488 + MER30 DNA MER1_type 2 230 0 2160 87 23 26 chr2 32867366 32867675 -217820179 + MER49 LTR ERV1 607 914 -9 23 54 0 0 chr2 32870072 32870109 -217817745 + AT_rich Low_complexity Low_complexity 1 37 0 2590 41 0 0 chr2 32870846 32871138 -217816716 + AluY SINE Alu 1 292 -19 2288 97 0 0 chr2 32871267 32871557 -217816297 - AluSg SINE Alu -20 290 1 243 167 17 50 chr2 32871713 32871773 -217816081 + MIR SINE MIR 63 120 -142 2462 76 3 0 chr2 32871792 32872094 -217815760 + AluSp SINE Alu 1 303 -10 610 236 50 55 chr2 32872098 32872297 -217815557 + MER63A DNA MER1_type 8 205 -5 197 301 221 0 chr2 32872303 32872416 -217815438 + MIR SINE MIR 125 262 0 2385 102 3 0 chr2 32872723 32873027 -217814827 - AluSp SINE Alu -8 305 1 2490 79 3 0 chr2 32873350 32873655 -217814199 + AluSp SINE Alu 3 308 -5 2341 90 0 16 chr2 32873842 32874152 -217813702 + AluSc SINE Alu 1 305 -4 987 204 19 28 chr2 32874306 32874517 -217813337 + MER3 DNA MER1_type 1 209 0 289 327 35 40 chr2 32875019 32875221 -217812633 - MIR3 SINE MIR -5 203 3 2363 92 3 0 chr2 32875435 32875740 -217812114 + AluSx SINE Alu 1 306 -6 4121 116 49 80 chr2 32875837 32876646 -217811208 - LTR1 LTR ERV1 -1 784 1 1774 166 0 40 chr2 32877216 32877517 -217810337 - AluJb SINE Alu -23 289 1 1412 203 81 61 chr2 32877693 32878056 -217809798 - L1ME2 LINE L1 -13 6151 5776 2259 76 46 16 chr2 32878056 32878359 -217809495 + AluSx SINE Alu 1 312 0 1412 203 81 61 chr2 32878359 32878454 -217809400 - L1ME2 LINE L1 -388 5776 5684 1963 205 27 117 chr2 32878610 32879020 -217808834 + LTR9 LTR ERV1 37 482 -130 2344 66 0 3 chr2 32879020 32879306 -217808548 + AluY SINE Alu 1 285 -26 1963 205 27 117 chr2 32879306 32879426 -217808428 + LTR9 LTR ERV1 482 504 -108 2301 99 0 0 chr2 32879426 32879719 -217808135 - AluSc SINE Alu -16 293 1 1963 205 27 117 chr2 32879719 32879820 -217808034 + LTR9 LTR ERV1 503 612 0 2540 68 0 0 chr2 32879910 32880218 -217807636 + AluSc SINE Alu 1 308 -1 2102 139 0 3 chr2 32880602 32880904 -217806950 + AluSx SINE Alu 1 301 -11 33 0 0 0 chr2 32881026 32881059 -217806795 + AT_rich Low_complexity Low_complexity 1 33 0 463 136 0 0 chr2 32881059 32881125 -217806729 - AluS SINE Alu -246 66 1 290 299 110 0 chr2 32881344 32881471 -217806383 + MIR SINE MIR 48 188 -74 918 182 123 26 chr2 32881597 32881921 -217805933 + MLT1B LTR MaLR 1 503 -2 224 318 23 0 chr2 32881955 32882043 -217805811 + MIR SINE MIR 46 135 -73 246 317 10 29 chr2 32882127 32882231 -217805623 + MIR3 SINE MIR 101 202 -6 2432 74 3 3 chr2 32882263 32882562 -217805292 + AluSg SINE Alu 1 299 -11 2337 109 3 3 chr2 32883278 32883590 -217804264 - AluSx SINE Alu 0 312 1 354 254 48 63 chr2 32884211 32884355 -217803499 + L1ME4a LINE L1 5923 6066 -55 1755 160 3 21 chr2 32884355 32884705 -217803149 - AluSx SINE Alu 0 345 1 354 254 48 63 chr2 32884705 32884748 -217803106 + L1ME4a LINE L1 6066 6108 -13 1531 221 131 13 chr2 32884798 32885250 -217802604 + MLT1D LTR MaLR 1 505 0 1289 96 0 6 chr2 32885894 32886061 -217801793 - AluSg/x SINE Alu -9 303 138 2140 114 10 0 chr2 32886063 32886362 -217801492 - AluSq SINE Alu -11 302 1 32 26 0 0 chr2 32886436 32886475 -217801379 + AT_rich Low_complexity Low_complexity 1 39 0 421 169 35 12 chr2 32886479 32886651 -217801203 + (TA)n Simple_repeat Simple_repeat 1 176 0 258 313 47 16 chr2 32886755 32886883 -217800971 + L3 LINE CR1 1155 1286 -291 2119 136 0 3 chr2 32886971 32887265 -217800589 - AluSx SINE Alu -19 293 1 276 233 78 22 chr2 32887265 32887355 -217800499 + LTR67 LTR ERVL 10 104 -453 2212 116 0 10 chr2 32887682 32887985 -217799869 + AluSx SINE Alu 1 300 -12 1803 128 3 62 chr2 32887995 32888330 -217799524 + AluSx SINE Alu 1 317 0 1865 163 24 24 chr2 32888511 32888848 -217799006 + MER1B DNA MER1_type 1 337 0 1738 181 0 17 chr2 32888897 32889195 -217798659 - AluJo SINE Alu -19 293 1 291 200 105 9 chr2 32889203 32889308 -217798546 - L1ME4a LINE L1 -5 6116 6002 * 886 223 96 0 chr2 32889306 32889613 -217798241 - L1ME4a LINE L1 -702 5462 5136 207 0 0 0 chr2 32889624 32889647 -217798207 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 381 22 0 0 chr2 32889646 32889692 -217798162 + (GA)n Simple_repeat Simple_repeat 2 47 0 1661 101 22 9 chr2 32889709 32889937 -217797917 - AluSq SINE Alu -82 231 1 858 161 40 7 chr2 32890064 32890213 -217797641 + MLT1A1 LTR MaLR 1 154 -211 330 78 0 0 chr2 32890215 32890266 -217797588 + L1MA3 LINE L1 6255 6305 0 882 143 0 14 chr2 32890270 32890410 -217797444 + FRAM SINE Alu 33 170 -6 1229 137 64 5 chr2 32890410 32890614 -217797240 + MLT1A1 LTR MaLR 150 365 0 339 233 0 0 chr2 32890614 32890674 -217797180 - MLT1D LTR MaLR -445 60 1 436 223 191 0 chr2 32890742 32890899 -217796955 - MIR SINE MIR -24 238 52 3509 142 82 60 chr2 32890998 32891139 -217796715 - L1MB8 LINE L1 0 6178 6042 1811 158 0 14 chr2 32891139 32891423 -217796431 + AluJb SINE Alu 13 292 -20 3509 142 82 60 chr2 32891423 32892027 -217795827 - L1MB8 LINE L1 -136 6042 5417 2322 100 3 0 chr2 32892064 32892364 -217795490 + AluSg SINE Alu 1 301 -9 707 310 184 13 chr2 32892365 32893016 -217794838 - L2 LINE L2 -137 3176 2397 1967 104 43 4 chr2 32893045 32893324 -217794530 + AluSg SINE Alu 7 296 -14 7889 75 2 1 chr2 32893691 32894659 -217793195 - LTR5 LTR ERVK 0 969 1 2223 89 0 3 chr2 32894702 32895009 -217792845 + AluSc SINE Alu 1 306 0 813 216 12 6 chr2 32895009 32895171 -217792683 + AluJo/FRAM SINE Alu 134 296 -16 208 324 15 15 chr2 32895450 32895518 -217792336 + MIR SINE MIR 16 83 -125 233 320 0 31 chr2 32895610 32895707 -217792147 - MIR3 SINE MIR -45 163 70 2342 31 38 17 chr2 32897090 32897381 -217790473 - AluY SINE Alu -14 297 1 2515 44 0 38 chr2 32897498 32897818 -217790036 - AluY SINE Alu -3 308 1 836 154 7 20 chr2 32897992 32898141 -217789713 - FRAM SINE Alu 0 40 1 1882 87 0 12 chr2 32898245 32898486 -217789368 - AluY SINE Alu -20 291 54 2547 37 3 13 chr2 32898493 32898791 -217789063 - AluY SINE Alu -16 295 1 283 191 111 0 chr2 32898791 32898854 -217789000 - AluJo SINE Alu -166 136 67 * 310 169 20 5 chr2 32898845 32898903 -217788951 - Alu SINE Alu -250 51 1 2124 138 0 3 chr2 32899347 32899651 -217788203 - AluJb SINE Alu -9 303 1 1919 150 10 23 chr2 32899718 32900025 -217787829 + AluSx SINE Alu 1 303 -9 772 206 12 18 chr2 32900031 32900196 -217787658 + AluJb SINE Alu 143 306 -6 654 228 0 0 chr2 32900259 32900386 -217787468 + FLAM_A SINE Alu 1 127 -6 417 288 32 50 chr2 32900476 32900538 -217787316 + MIR SINE MIR 47 109 -153 2323 92 0 3 chr2 32900538 32900841 -217787013 - AluSg SINE Alu -8 302 1 417 288 32 50 chr2 32900841 32900905 -217786949 + MIR SINE MIR 109 173 -89 2423 54 10 3 chr2 32900905 32901202 -217786652 + AluY SINE Alu 1 299 -12 417 288 32 50 chr2 32901202 32901293 -217786561 + MIR SINE MIR 173 261 -1 2242 96 0 23 chr2 32901831 32902133 -217785721 - AluSx SINE Alu -17 295 1 305 221 42 74 chr2 32902183 32902278 -217785576 - L2 LINE L2 0 3272 3181 2039 133 155 3 chr2 32902454 32902822 -217785032 + MSTA LTR MaLR 5 428 0 506 323 141 31 chr2 32902874 32903518 -217784336 - L2 LINE L2 -358 2956 2242 4913 181 113 47 chr2 32903551 32903759 -217784095 - Charlie6 DNA MER1_type -61 3439 3246 1735 112 0 0 chr2 32903759 32903991 -217783863 - AluSg/x SINE Alu -6 306 75 4913 181 113 47 chr2 32903991 32904233 -217783621 - Charlie6 DNA MER1_type -254 3246 3021 1118 169 52 24 chr2 32904233 32904481 -217783373 + L1MD2 LINE L1 6095 6349 -10 4913 181 113 47 chr2 32904481 32904663 -217783191 - Charlie6 DNA MER1_type -479 3021 2852 2099 93 43 0 chr2 32904663 32904941 -217782913 - AluSc SINE Alu -19 290 1 4913 181 113 47 chr2 32904941 32905072 -217782782 - Charlie6 DNA MER1_type -648 2852 2731 1893 155 21 0 chr2 32905072 32905362 -217782492 + AluSx SINE Alu 1 296 -16 4913 181 113 47 chr2 32905362 32905959 -217781895 - Charlie6 DNA MER1_type -769 2731 1986 2034 107 0 4 chr2 32906636 32906906 -217780948 + AluSx SINE Alu 1 269 -43 198 0 0 0 chr2 32906906 32906928 -217780926 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 995 167 19 0 chr2 32906928 32907090 -217780764 + AluSc SINE Alu 130 294 -15 189 222 175 16 chr2 32907337 32907400 -217780454 - MIR SINE MIR -78 130 58 180 329 121 7 chr2 32908330 32908470 -217779384 + MIR3 SINE MIR 49 204 -4 24 0 0 0 chr2 32908751 32908775 -217779079 + AT_rich Low_complexity Low_complexity 1 24 0 1981 129 0 32 chr2 32909362 32909671 -217778183 + AluSx SINE Alu 1 299 -13 247 264 28 0 chr2 32909671 32909743 -217778111 - HsTC2 DNA Tc2 0 1898 1825 372 303 104 44 chr2 32909755 32910006 -217777848 + L1MEd LINE L1 327 592 -5527 347 253 61 0 chr2 32910052 32910151 -217777703 - HsTC2 DNA Tc2 -1793 105 1 21 0 0 0 chr2 32910264 32910285 -217777569 + AT_rich Low_complexity Low_complexity 1 21 0 2393 84 0 10 chr2 32910690 32910998 -217776856 + AluSc SINE Alu 1 305 -4 269 0 0 53 chr2 32911147 32911185 -217776669 + (TTTTTA)n Simple_repeat Simple_repeat 4 39 0 6102 63 33 54 chr2 32911186 32913153 -217774701 - SVA Other Other -518 1383 70 240 35 0 0 chr2 32913153 32913182 -217774672 + (AGGGGG)n Simple_repeat Simple_repeat 6 34 0 1400 210 82 62 chr2 32913421 32913722 -217774132 - MLT1D LTR MaLR 0 505 193 2108 131 3 0 chr2 32913722 32914012 -217773842 - AluSq SINE Alu -22 291 1 1400 210 82 62 chr2 32914012 32914100 -217773754 - MLT1D LTR MaLR -312 193 108 2080 93 62 3 chr2 32914315 32914604 -217773250 + AluSx SINE Alu 1 306 -6 1958 217 50 35 chr2 32914628 32915229 -217772625 - L1MC4a LINE L1 -353 7455 6779 2186 110 13 0 chr2 32915229 32915530 -217772324 - AluSp SINE Alu -8 305 1 1958 217 50 35 chr2 32915530 32915595 -217772259 - L1MC4a LINE L1 -1029 6779 6716 898 119 0 0 chr2 32915595 32915713 -217772141 + FLAM_C SINE Alu 1 118 -25 180 97 0 0 chr2 32915763 32915794 -217772060 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 430 204 44 53 chr2 32915798 32915911 -217771943 - L1MC4a LINE L1 -1105 6703 6600 204 0 37 0 chr2 32916662 32916689 -217771165 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 1846 149 14 0 chr2 32916689 32916965 -217770889 - AluSx SINE Alu -1 308 3 2141 136 13 0 chr2 32916975 32917283 -217770571 - AluSx SINE Alu 0 312 1 1517 167 49 3 chr2 32917340 32917646 -217770208 - Charlie1 DNA MER1_type -162 2599 2280 1417 195 47 4 chr2 32917649 32917926 -217769928 + AluJb SINE Alu 1 289 -23 1897 119 9 59 chr2 32917947 32918095 -217769759 + AluSx SINE Alu 1 126 -186 2328 97 3 0 chr2 32918095 32918394 -217769460 + AluSp SINE Alu 2 301 -12 1897 119 9 59 chr2 32918394 32918565 -217769289 + AluSx SINE Alu 126 304 -8 232 340 71 20 chr2 32918849 32919046 -217768808 + MIR SINE MIR 46 252 -10 284 295 9 9 chr2 32919220 32919325 -217768529 - L2 LINE L2 -1035 2279 2175 1693 108 150 0 chr2 32919854 32920114 -217767740 - AluSx SINE Alu -13 299 1 2372 107 0 0 chr2 32920129 32920438 -217767416 - AluSg SINE Alu -1 309 1 417 243 115 46 chr2 32921028 32921195 -217766659 + MIR SINE MIR 28 215 -47 1675 161 33 15 chr2 32921195 32921469 -217766385 + AluJb SINE Alu 4 282 -30 417 243 115 46 chr2 32921469 32921519 -217766335 + MIR SINE MIR 215 260 -2 1443 158 98 8 chr2 32921535 32921801 -217766053 + AluJb SINE Alu 1 290 -22 1038 186 101 0 chr2 32922623 32922822 -217765032 + MER20 DNA MER1_type 1 219 0 22 70 0 0 chr2 32923074 32923117 -217764737 + AT_rich Low_complexity Low_complexity 1 43 0 197 236 18 18 chr2 32923229 32923284 -217764570 - MER5B DNA MER1_type -30 148 94 27 49 0 0 chr2 32924150 32924191 -217763663 + AT_rich Low_complexity Low_complexity 1 41 0 33 56 0 0 chr2 32924269 32924323 -217763531 + AT_rich Low_complexity Low_complexity 1 54 0 2276 87 10 13 chr2 32925755 32926064 -217761790 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr2 32926145 32926167 -217761687 + AT_rich Low_complexity Low_complexity 1 22 0 2325 91 7 0 chr2 32926222 32926518 -217761336 - AluY SINE Alu -13 298 1 2229 106 3 0 chr2 32926541 32926860 -217760994 + AluSp SINE Alu 1 320 0 2422 52 42 0 chr2 32926871 32927160 -217760694 + AluY SINE Alu 1 301 -10 1059 172 63 14 chr2 32927320 32927541 -217760313 + MER46A DNA MER2_type 5 236 0 22 80 0 0 chr2 32927595 32927645 -217760209 + AT_rich Low_complexity Low_complexity 1 50 0 2274 108 3 3 chr2 32927791 32928098 -217759756 - AluSx SINE Alu -4 308 2 865 137 0 0 chr2 32928323 32928447 -217759407 + FLAM_C SINE Alu 1 124 -19 961 196 8 106 chr2 32928511 32928721 -217759133 + MER8 DNA MER2_type 1 181 -58 1825 143 17 11 chr2 32928721 32929008 -217758846 + AluJb SINE Alu 17 305 -7 961 196 8 106 chr2 32929008 32929062 -217758792 + MER8 DNA MER2_type 181 239 0 694 100 0 40 chr2 32929184 32929284 -217758570 + 7SLRNA srpRNA srpRNA 213 308 -12 2711 39 0 0 chr2 32930316 32930627 -217757227 + AluY SINE Alu 1 311 0 235 286 12 36 chr2 32930728 32930812 -217757042 - L2 LINE L2 -8 3264 3183 2431 55 3 0 chr2 32930820 32931109 -217756745 + AluY SINE Alu 1 290 -21 240 424 0 0 chr2 32931246 32931345 -217756509 - L2 LINE L2 -221 3051 2953 23 0 0 0 chr2 32931371 32931394 -217756460 + AT_rich Low_complexity Low_complexity 1 23 0 2067 125 7 0 chr2 32931486 32931775 -217756079 - AluSx SINE Alu -21 291 1 2159 101 35 0 chr2 32931816 32932103 -217755751 - AluSx SINE Alu -15 297 1 1196 217 83 10 chr2 32932137 32932451 -217755403 + L1ME3A LINE L1 5626 5962 -208 2332 94 3 0 chr2 32932501 32932800 -217755054 + AluSp SINE Alu 1 300 -13 643 302 71 71 chr2 32933048 32933455 -217754399 - MLT1J LTR MaLR -102 409 3 2323 66 31 0 chr2 32933491 32933780 -217754074 + AluY SINE Alu 1 298 -13 771 131 0 29 chr2 32933921 32934058 -217753796 + FLAM_C SINE Alu 1 133 0 235 266 73 9 chr2 32934306 32934415 -217753439 + L1P LINE L1 5314 5429 -722 2402 74 3 3 chr2 32934804 32935101 -217752753 - AluSc SINE Alu -12 297 1 2235 94 7 3 chr2 32935168 32935455 -217752399 + AluSc SINE Alu 1 288 -21 1129 180 182 95 chr2 32935582 32935603 -217752251 + L1ME3A LINE L1 5669 5687 -483 738 160 189 17 chr2 32935603 32935778 -217752076 + MER3 DNA MER1_type 1 205 -4 1129 180 182 95 chr2 32935778 32935925 -217751929 + L1ME3A LINE L1 5687 5820 -350 1938 135 14 14 chr2 32935925 32936221 -217751633 + AluJb SINE Alu 3 298 -14 1129 180 182 95 chr2 32936221 32936512 -217751342 + L1ME3A LINE L1 5820 6169 -1 1966 124 28 11 chr2 32936518 32936800 -217751054 + AluSx SINE Alu 1 287 -25 2422 89 3 3 chr2 32937029 32937342 -217750512 + AluSp SINE Alu 1 313 0 307 191 12 0 chr2 32937561 32937623 -217750231 - Alu SINE Alu -253 47 1 2315 48 26 0 chr2 32937889 32938190 -217749664 - AluY SINE Alu 0 308 1 1071 207 24 132 chr2 32938191 32938312 -217749542 + MLT2D LTR ERVL 1 133 -281 2231 60 14 11 chr2 32938312 32938620 -217749234 + AluY SINE Alu 1 309 0 1071 207 24 132 chr2 32938620 32938961 -217748893 + MLT2D LTR ERVL 133 414 0 2139 118 0 20 chr2 32939176 32939480 -217748374 + AluSx SINE Alu 1 298 -14 632 227 164 13 chr2 32939482 32939707 -217748147 - L1ME LINE L1 -525 5641 5383 23 0 0 0 chr2 32939707 32939730 -217748124 + AT_rich Low_complexity Low_complexity 1 23 0 307 164 0 36 chr2 32939731 32939786 -217748068 - AluJo SINE Alu -13 289 237 437 72 0 72 chr2 32939797 32939866 -217747988 + LTR32 LTR ERVL 24 87 -384 1494 132 12 21 chr2 32939885 32940127 -217747727 + LTR32 LTR ERVL 232 471 0 1149 153 34 114 chr2 32940127 32940346 -217747508 - AluJo SINE Alu -71 241 45 2446 53 7 7 chr2 32940346 32940646 -217747208 + AluY SINE Alu 1 300 -11 1149 153 34 114 chr2 32940646 32940688 -217747166 - AluJo SINE Alu -267 45 1 2206 121 23 0 chr2 32940744 32941050 -217746804 + AluSq SINE Alu 1 313 0 1060 105 0 0 chr2 32941069 32941202 -217746652 + AluSq/x SINE Alu 1 133 -180 275 238 71 12 chr2 32941860 32941944 -217745910 + MIR SINE MIR 17 105 -157 23 33 0 0 chr2 32941972 32942002 -217745852 + AT_rich Low_complexity Low_complexity 1 30 0 2113 131 0 13 chr2 32942079 32942213 -217745641 + AluSg SINE Alu 1 135 -175 2104 100 0 4 chr2 32942213 32942493 -217745361 + AluSq SINE Alu 35 313 0 2113 131 0 13 chr2 32942493 32942656 -217745198 + AluSg SINE Alu 135 294 -16 202 170 43 0 chr2 32942656 32942703 -217745151 + MIR SINE MIR 155 203 -59 937 177 151 137 chr2 32942730 32943102 -217744752 + L1MC4 LINE L1 6671 7047 -995 653 153 48 4 chr2 32943177 32943304 -217744550 + L1MC4 LINE L1 7646 8041 -1 201 167 0 24 chr2 32943304 32943346 -217744508 + MIR SINE MIR 197 237 -25 2364 106 0 3 chr2 32943665 32943976 -217743878 - AluSx SINE Alu -2 310 1 818 136 42 131 chr2 32944269 32944307 -217743547 + MER20 DNA MER1_type 1 41 -178 2535 62 0 10 chr2 32944307 32944613 -217743241 - AluY SINE Alu -8 303 1 818 136 42 131 chr2 32944613 32944765 -217743089 + MER20 DNA MER1_type 41 174 -45 21 57 0 0 chr2 32944881 32944916 -217742938 + AT_rich Low_complexity Low_complexity 1 35 0 2197 114 3 3 chr2 32944941 32945239 -217742615 + AluSx SINE Alu 1 298 -14 327 128 0 0 chr2 32945392 32945439 -217742415 - AluSp SINE Alu -125 178 132 2319 88 3 3 chr2 32945446 32945740 -217742114 - AluSq SINE Alu -19 294 1 1424 113 21 125 chr2 32945759 32946095 -217741759 - AluSx SINE Alu -1 301 1 1379 203 25 21 chr2 32946311 32946621 -217741233 - AluJo SINE Alu 0 311 1 2004 135 0 3 chr2 32946724 32947041 -217740813 - AluSg SINE Alu 0 316 1 2404 88 3 3 chr2 32947530 32947837 -217740017 + AluSp SINE Alu 1 307 -6 2058 125 7 0 chr2 32947842 32948141 -217739713 + AluSx SINE Alu 1 301 0 270 253 13 0 chr2 32948369 32948448 -217739406 - HAL1 LINE L1 -699 1808 1729 1910 133 4 4 chr2 32948657 32948928 -217738926 + AluSx SINE Alu 1 271 -41 2276 97 0 10 chr2 32949029 32949338 -217738516 + AluY SINE Alu 4 309 -2 313 227 36 26 chr2 32949646 32949767 -217738087 - LTR33A LTR ERVL 0 523 431 2485 70 3 3 chr2 32949811 32950123 -217737731 + AluSx SINE Alu 1 312 0 2325 89 14 0 chr2 32950735 32951026 -217736828 + AluSx SINE Alu 10 304 -8 2118 82 7 4 chr2 32951137 32951406 -217736448 + AluSp SINE Alu 1 270 -43 405 0 0 0 chr2 32951409 32951454 -217736400 + (CA)n Simple_repeat Simple_repeat 2 46 0 189 0 0 0 chr2 32951524 32951545 -217736309 + (TG)n Simple_repeat Simple_repeat 1 21 0 850 182 6 0 chr2 32951545 32951710 -217736144 - L1MD3 LINE L1 -10 7985 7820 253 226 94 0 chr2 32951708 32951761 -217736093 - L1MC4a LINE L1 -435 7373 7316 * 825 122 29 7 chr2 32951762 32951901 -217735953 - L1MC4a LINE L1 -1421 6387 6246 972 221 146 35 chr2 32951901 32952065 -217735789 - AluJo SINE Alu 0 313 168 2199 109 10 0 chr2 32952065 32952358 -217735496 + AluSg SINE Alu 1 296 -14 972 221 146 35 chr2 32952358 32952478 -217735376 - AluJo SINE Alu -145 168 1 254 188 0 75 chr2 32952483 32952563 -217735291 - L1MC4a LINE L1 -1572 6236 6163 322 39 59 0 chr2 32952570 32952621 -217735233 + T-rich Low_complexity Low_complexity 1 54 0 686 179 0 0 chr2 32952624 32952741 -217735113 - FLAM_C SINE Alu -16 117 1 2195 93 13 22 chr2 32952789 32952967 -217734887 + AluY SINE Alu 1 176 -135 306 0 0 0 chr2 32952967 32953001 -217734853 + (CGGGG)n Simple_repeat Simple_repeat 1 34 0 2195 93 13 22 chr2 32953001 32953135 -217734719 + AluY SINE Alu 176 310 -1 2458 88 0 0 chr2 32953227 32953534 -217734320 - AluSc SINE Alu -1 308 2 392 199 59 66 chr2 32953545 32953681 -217734173 + Charlie8 DNA MER1_type 61 195 -2222 191 306 71 12 chr2 32953889 32953974 -217733880 + MIR SINE MIR 3 92 -170 744 107 90 25 chr2 32954120 32954242 -217733612 + AluSq/x SINE Alu 2 131 -182 2357 105 0 0 chr2 32954244 32954548 -217733306 + AluSx SINE Alu 1 304 -8 2503 88 0 0 chr2 32954552 32954884 -217732970 + AluY SINE Alu 2 333 0 2086 138 0 6 chr2 32954887 32955199 -217732655 + AluSx SINE Alu 1 310 -2 562 236 0 0 chr2 32955206 32955316 -217732538 + MER96B DNA MER1_type? 307 416 -1 569 305 96 61 chr2 32955317 32955651 -217732203 + L2 LINE L2 2652 2973 -340 2154 120 17 3 chr2 32955651 32955951 -217731903 - AluSx SINE Alu -8 304 1 569 305 96 61 chr2 32955951 32956246 -217731608 + L2 LINE L2 2973 3295 -18 836 153 0 0 chr2 32956253 32956384 -217731470 + FLAM_C SINE Alu 1 131 -2 2049 137 0 13 chr2 32956727 32957026 -217730828 + AluSx SINE Alu 1 295 -17 271 222 22 44 chr2 32957269 32957359 -217730495 + MER5A DNA MER1_type 4 91 -98 234 342 8 34 chr2 32957461 32957578 -217730276 - MER5A DNA MER1_type -5 184 71 378 0 0 0 chr2 32957621 32957663 -217730191 + (TG)n Simple_repeat Simple_repeat 1 42 0 26 0 0 0 chr2 32957675 32957701 -217730153 + AT_rich Low_complexity Low_complexity 1 26 0 2349 86 7 0 chr2 32957782 32958074 -217729780 + AluY SINE Alu 1 294 -17 324 244 178 0 chr2 32958305 32958440 -217729414 - MIR SINE MIR -1 261 103 512 116 53 53 chr2 32958453 32958548 -217729306 + LTR47A LTR ERVL 1 95 -357 298 205 86 43 chr2 32958716 32958833 -217729021 - L1MC4 LINE L1 -5 8037 7916 2560 52 0 16 chr2 32958915 32959224 -217728630 - AluY SINE Alu -7 304 1 1194 71 0 0 chr2 32959225 32959365 -217728489 - AluSg SINE Alu -170 140 1 1865 122 7 21 chr2 32959496 32959775 -217728079 + AluSx SINE Alu 1 275 -37 1896 137 0 59 chr2 32959801 32959940 -217727914 + AluSx SINE Alu 1 147 -165 2233 75 7 14 chr2 32959940 32960245 -217727609 + AluSc SINE Alu 1 303 0 1896 137 0 59 chr2 32960245 32960425 -217727429 + AluSx SINE Alu 147 303 -9 2603 56 0 0 chr2 32960449 32960754 -217727100 + AluY SINE Alu 1 305 -6 29 0 0 0 chr2 32961183 32961212 -217726642 + AT_rich Low_complexity Low_complexity 1 29 0 2225 109 0 7 chr2 32961220 32961523 -217726331 + AluSc SINE Alu 1 301 -8 2396 95 0 0 chr2 32961525 32961829 -217726025 + AluSg SINE Alu 1 304 -6 2484 58 0 3 chr2 32961830 32962125 -217725729 + AluY SINE Alu 1 294 -17 3588 146 22 90 chr2 32962134 32962198 -217725656 - L1MB3 LINE L1 -7 6176 6109 1773 152 22 0 chr2 32962198 32962502 -217725352 + AluJo SINE Alu 1 310 0 4354 159 46 23 chr2 32962502 32962983 -217724871 - L1MC2 LINE L1 -12 6332 5864 212 0 0 35 chr2 32962983 32963012 -217724842 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 2071 87 0 8 chr2 32963014 32963278 -217724576 - AluSx SINE Alu -24 288 27 1893 150 3 7 chr2 32963278 32963569 -217724285 - AluJb SINE Alu -20 292 1 4354 159 46 23 chr2 32963569 32963955 -217723899 - L1MC2 LINE L1 -479 5865 5441 3588 146 22 90 chr2 32963955 32964602 -217723252 - L1MB3 LINE L1 -73 6110 5520 2294 114 3 0 chr2 32964602 32964908 -217722946 - AluSx SINE Alu -5 307 1 3588 146 22 90 chr2 32964908 32964997 -217722857 - L1MB3 LINE L1 -663 5520 5427 25 75 0 0 chr2 32965186 32965239 -217722615 + AT_rich Low_complexity Low_complexity 1 53 0 1614 131 6 113 chr2 32965286 32965492 -217722362 - AluJb SINE Alu -8 304 144 2261 91 7 26 chr2 32965492 32965799 -217722055 - AluSp SINE Alu -12 301 1 1614 131 6 113 chr2 32965799 32965921 -217721933 - AluJb SINE Alu -168 144 11 1124 53 0 0 chr2 32966326 32966458 -217721396 - AluY SINE Alu -179 132 1 2341 97 0 7 chr2 32966472 32966772 -217721082 - AluSg SINE Alu -12 298 1 192 125 0 0 chr2 32966773 32966805 -217721049 + (TCCC)n Simple_repeat Simple_repeat 4 35 0 2573 77 0 0 chr2 32966809 32967120 -217720734 - AluY SINE Alu 0 311 1 401 78 0 0 chr2 32967137 32967201 -217720653 - Alu SINE Alu 0 312 249 1924 157 20 0 chr2 32967537 32967831 -217720023 - AluJb SINE Alu -12 300 1 2355 83 0 16 chr2 32967855 32968169 -217719685 - AluY SINE Alu -2 309 1 731 110 0 10 chr2 32968265 32968365 -217719489 - AluS SINE Alu -214 99 1 1786 132 41 27 chr2 32968398 32968534 -217719320 + AluSx SINE Alu 1 134 -178 2181 78 7 14 chr2 32968534 32968857 -217718997 + AluSc SINE Alu 1 321 0 1786 132 41 27 chr2 32968857 32969072 -217718782 + AluSx SINE Alu 134 312 0 1879 128 43 0 chr2 32969119 32969401 -217718453 - AluSg SINE Alu -16 294 1 306 0 0 0 chr2 32969502 32969536 -217718318 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1219 110 69 0 chr2 32969545 32969718 -217718136 - AluSg/x SINE Alu -24 288 104 1017 134 0 0 chr2 32969741 32969883 -217717971 - AluSq/x SINE Alu -170 142 1 2399 77 0 3 chr2 32969902 32970200 -217717654 - AluY SINE Alu -14 297 1 2251 106 3 0 chr2 32970212 32970513 -217717341 - AluSx SINE Alu -10 302 1 255 333 0 77 chr2 32970623 32970740 -217717114 + MIR SINE MIR 17 124 -138 2004 133 0 17 chr2 32970741 32970908 -217716946 - AluSx SINE Alu -15 297 136 2262 99 7 3 chr2 32970908 32971211 -217716643 - AluSc SINE Alu -5 304 1 2004 133 0 17 chr2 32971211 32971345 -217716509 - AluSx SINE Alu -176 136 1 187 279 54 54 chr2 32971387 32971498 -217716356 - MIR SINE MIR -81 181 71 1947 126 70 3 chr2 32971541 32971842 -217716012 + MER31A LTR ERV1 1 321 -164 255 279 15 0 chr2 32971850 32971918 -217715936 + MER31-int LTR ERV1 103 171 -4765 1022 152 6 12 chr2 32971932 32972096 -217715758 + FRAM SINE Alu 1 163 -13 2482 67 0 0 chr2 32972097 32972397 -217715457 + AluY SINE Alu 2 301 -10 304 91 146 0 chr2 32972425 32972480 -217715374 + MER31-int LTR ERV1 172 234 -4702 517 204 73 22 chr2 32972591 32972728 -217715126 + MER31-int LTR ERV1 611 754 -4182 365 171 23 57 chr2 32972755 32972843 -217715011 + MER31-int LTR ERV1 881 965 -3971 1557 102 0 9 chr2 32972848 32973073 -217714781 - AluSg/x SINE Alu -7 303 81 299 134 0 36 chr2 32973073 32973130 -217714724 - Alu SINE Alu -265 38 1 1435 172 35 97 chr2 32973130 32973353 -217714501 + MER31-int LTR ERV1 3683 3875 -1061 2192 99 0 50 chr2 32973353 32973675 -217714179 + AluSg1 SINE Alu 1 306 -3 1435 172 35 97 chr2 32973675 32973823 -217714031 + MER31-int LTR ERV1 3875 4031 -905 258 233 67 44 chr2 32973909 32973999 -217713855 - MIR SINE MIR -14 248 157 307 114 171 29 chr2 32974063 32974133 -217713721 + L1MD2 LINE L1 6070 6149 -210 505 220 0 0 chr2 32974135 32974235 -217713619 + L1MD2 LINE L1 6204 6303 -56 530 188 0 36 chr2 32974235 32974347 -217713507 - L1MC3 LINE L1 -348 7437 7330 21 0 0 0 chr2 32975025 32975046 -217712808 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 32975311 32975338 -217712516 + GC_rich Low_complexity Low_complexity 1 27 0 249 0 40 80 chr2 32976047 32976097 -217711757 + (TGGGGG)n Simple_repeat Simple_repeat 6 53 0 21 36 0 0 chr2 32977737 32977765 -217710089 + AT_rich Low_complexity Low_complexity 1 28 0 807 164 0 0 chr2 32977769 32977891 -217709963 - FLAM_C SINE Alu -21 122 1 184 265 147 0 chr2 32978840 32978908 -217708946 + L2 LINE L2 3200 3277 -36 192 77 0 0 chr2 32978908 32978934 -217708920 + (TG)n Simple_repeat Simple_repeat 2 27 0 1908 138 6 44 chr2 32978939 32979257 -217708597 - AluSx SINE Alu -6 306 1 5057 136 56 32 chr2 32979375 32980336 -217707518 - L1MC1 LINE L1 -2 6331 5348 2330 89 0 10 chr2 32980337 32980640 -217707214 - AluY SINE Alu -11 300 1 203 246 16 66 chr2 32980742 32980803 -217707051 + MIR SINE MIR 7 64 -198 25 0 0 0 chr2 32980807 32980832 -217707022 + AT_rich Low_complexity Low_complexity 1 25 0 440 238 157 14 chr2 32980887 32981034 -217706820 + MIR SINE MIR 88 255 -7 1825 154 34 3 chr2 32981071 32981369 -217706485 + AluJb SINE Alu 1 307 -5 402 236 121 51 chr2 32981651 32981870 -217705984 + MIR SINE MIR 17 256 -6 207 0 0 0 chr2 32982266 32982289 -217705565 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1973 89 60 11 chr2 32982294 32982563 -217705291 - AluSg SINE Alu -28 282 1 485 240 337 11 chr2 32983173 32983348 -217704506 + MIR SINE MIR 21 252 -10 2281 79 17 3 chr2 32983350 32983641 -217704213 - AluSg SINE Alu -15 295 1 1890 144 48 0 chr2 32983869 32983890 -217703964 - AluSx SINE Alu -6 306 287 264 30 0 0 chr2 32983890 32983923 -217703931 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 1890 144 48 0 chr2 32983923 32984193 -217703661 - AluSx SINE Alu -25 287 1 704 257 28 56 chr2 32984254 32984503 -217703351 - HAL1 LINE L1 -2265 242 1 1672 130 8 0 chr2 32984743 32984989 -217702865 + AluJo SINE Alu 21 268 -44 2106 126 3 7 chr2 32985202 32985511 -217702343 + AluSp SINE Alu 1 308 -5 1761 138 22 4 chr2 32985562 32985837 -217702017 + AluSg SINE Alu 1 280 -30 491 207 56 101 chr2 32986089 32986268 -217701586 - MER5B DNA MER1_type 0 178 8 2017 129 0 4 chr2 32986281 32986560 -217701294 + AluSg SINE Alu 1 278 -32 230 0 33 0 chr2 32986569 32986599 -217701255 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1946 146 0 0 chr2 32986688 32986969 -217700885 - AluSx SINE Alu -26 286 6 344 282 122 19 chr2 32986999 32987155 -217700699 - L2 LINE L2 -171 3142 2971 2294 101 0 0 chr2 32987451 32987749 -217700105 - AluSx SINE Alu -13 299 2 843 148 0 0 chr2 32987847 32987969 -217699885 + FLAM_A SINE Alu 16 137 -5 373 270 0 0 chr2 32987969 32988058 -217699796 + L1MC4 LINE L1 6615 6703 -1339 191 35 0 35 chr2 32988084 32988113 -217699741 + (CA)n Simple_repeat Simple_repeat 2 29 0 470 101 0 0 chr2 32988728 32988797 -217699057 - L1MA2 LINE L1 -4 6300 6232 1632 117 0 13 chr2 32989037 32989268 -217698586 + AluJb SINE Alu 85 312 0 271 209 129 36 chr2 32989311 32989405 -217698449 - L1ME4a LINE L1 -63 6058 5945 1959 123 3 30 chr2 32989405 32989705 -217698149 - AluSx SINE Alu -20 292 1 271 209 129 36 chr2 32989705 32989749 -217698105 - L1ME4a LINE L1 -176 5945 5907 2157 120 3 3 chr2 32989817 32990126 -217697728 - AluSx SINE Alu -1 311 3 26 30 0 0 chr2 32990150 32990183 -217697671 + AT_rich Low_complexity Low_complexity 1 33 0 2466 231 21 26 chr2 32990223 32990584 -217697270 - L1ME1 LINE L1 -72 6094 5736 1647 189 50 3 chr2 32990584 32990881 -217696973 + AluJb SINE Alu 1 311 -1 2466 231 21 26 chr2 32990881 32991135 -217696719 - L1ME1 LINE L1 -430 5736 5482 1547 223 34 64 chr2 32991135 32991601 -217696253 + L1MB1 LINE L1 4538 4989 -1157 * 2442 203 122 27 chr2 32991591 32992223 -217695631 + L1MB1 LINE L1 5477 6168 0 393 194 56 23 chr2 32992239 32992368 -217695486 - L1ME1 LINE L1 -1286 4860 4727 1188 151 46 50 chr2 32992378 32992488 -217695366 - AluJo SINE Alu -69 243 134 2690 30 0 7 chr2 32992488 32992793 -217695061 - AluY SINE Alu -7 304 2 1188 151 46 50 chr2 32992793 32992920 -217694934 - AluJo SINE Alu -178 134 7 738 226 106 22 chr2 32992930 32993205 -217694649 - L1ME1 LINE L1 -1538 4608 4311 751 201 45 6 chr2 32993219 32993398 -217694456 - L1ME1 LINE L1 -1932 4214 4029 556 152 179 9 chr2 32993402 32993514 -217694340 + FLAM_A SINE Alu 1 131 -2 582 105 0 0 chr2 32993532 32993608 -217694246 - Alu SINE Alu -232 77 2 458 159 0 0 chr2 32993609 32993678 -217694176 + Tigger2 DNA MER2_type 678 746 -1972 3415 151 66 23 chr2 32993781 32993926 -217693928 - Tigger2 DNA MER2_type -2025 693 556 2361 85 0 3 chr2 32993926 32994232 -217693622 + AluY SINE Alu 1 305 -6 3415 151 66 23 chr2 32994232 32994750 -217693104 - Tigger2 DNA MER2_type -2162 556 1 1014 118 76 133 chr2 32994751 32995014 -217692840 - MER44D DNA MER2_type -91 518 1 1004 226 55 60 chr2 32995092 32995236 -217692618 - L1MC4 LINE L1 -1 8041 7898 333 0 0 0 chr2 32995236 32995273 -217692581 + (TG)n Simple_repeat Simple_repeat 2 38 0 1004 226 55 60 chr2 32995273 32995543 -217692311 - L1MC4 LINE L1 -144 7898 7629 233 195 171 37 chr2 32996017 32996099 -217691755 - MLT1J LTR MaLR -16 495 403 390 197 40 0 chr2 32996332 32996408 -217691446 - MLT1J LTR MaLR -323 188 110 21 0 0 0 chr2 32996426 32996447 -217691407 + AT_rich Low_complexity Low_complexity 1 21 0 2283 104 3 0 chr2 32996481 32996779 -217691075 - AluSx SINE Alu -13 299 1 225 371 10 0 chr2 32997560 32997657 -217690197 - L3 LINE CR1 -384 1193 1096 339 293 71 20 chr2 32997723 32997921 -217689933 - L3 LINE CR1 -631 946 739 27 0 0 0 chr2 32998147 32998174 -217689680 + AT_rich Low_complexity Low_complexity 1 27 0 1983 110 10 13 chr2 32998469 32998768 -217689086 + AluSx SINE Alu 1 298 -14 2230 108 3 3 chr2 32999255 32999562 -217688292 - AluSp SINE Alu -6 307 1 2203 129 0 0 chr2 32999563 32999866 -217687988 - AluSg SINE Alu -7 303 1 275 279 34 20 chr2 32999866 33000013 -217687841 - L1MC/D LINE L1 -1919 5889 5741 1358 271 215 14 chr2 33000020 33000661 -217687193 - LTR50 LTR ERVL -25 770 1 2098 135 0 0 chr2 33000748 33001044 -217686810 - AluSg SINE Alu -14 296 1 22 0 0 0 chr2 33001054 33001076 -217686778 + AT_rich Low_complexity Low_complexity 1 22 0 2056 98 7 0 chr2 33001076 33001352 -217686502 - AluSg SINE Alu -19 291 14 1093 289 47 26 chr2 33001431 33001557 -217686297 - ERVL LTR ERVL -440 5324 5202 2119 108 20 3 chr2 33001557 33001854 -217686000 - AluSx SINE Alu -10 302 1 1093 289 47 26 chr2 33001854 33002153 -217685701 - ERVL LTR ERVL -562 5202 4890 4038 299 84 31 chr2 33002214 33004467 -217683387 - ERVL LTR ERVL -1002 4762 2294 1427 213 24 14 chr2 33004467 33004763 -217683091 - AluJo SINE Alu -13 299 1 4038 299 84 31 chr2 33004763 33005419 -217682435 - ERVL LTR ERVL -3470 2294 1674 1284 116 62 58 chr2 33005943 33006127 -217681727 - L1MA7 LINE L1 -6 6285 6098 2149 94 24 10 chr2 33006127 33006424 -217681430 + AluSg SINE Alu 1 301 -9 1284 116 62 58 chr2 33006424 33006480 -217681374 - L1MA7 LINE L1 -193 6098 6044 351 128 0 0 chr2 33006482 33006529 -217681325 - Alu SINE Alu -261 47 1 476 118 0 0 chr2 33006536 33006604 -217681250 - L1P5 LINE L1 -376 5780 5713 21 0 0 0 chr2 33006604 33006625 -217681229 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 33007263 33007307 -217680547 + AT_rich Low_complexity Low_complexity 1 44 0 2066 116 0 60 chr2 33007719 33007886 -217679968 - AluSq SINE Alu -13 300 125 2169 108 10 3 chr2 33007886 33008182 -217679672 - AluSp SINE Alu -15 298 1 2333 98 0 0 chr2 33008185 33008491 -217679363 - AluY SINE Alu -4 307 2 2066 116 0 60 chr2 33008491 33008638 -217679216 - AluSq SINE Alu -190 123 1 1796 110 0 8 chr2 33010315 33010561 -217677293 - AluSx SINE Alu -51 261 18 1468 167 9 66 chr2 33010645 33010963 -217676891 - AluJb SINE Alu -12 300 1 1493 193 10 42 chr2 33011532 33011843 -217676011 - AluJo SINE Alu -11 301 1 207 0 0 0 chr2 33011969 33011992 -217675862 + (TA)n Simple_repeat Simple_repeat 1 23 0 1411 188 58 18 chr2 33012577 33012853 -217675001 + AluJo SINE Alu 6 292 -20 207 171 0 0 chr2 33012879 33012892 -217674962 + (CAA)n Simple_repeat Simple_repeat 2 14 -28 2180 83 3 10 chr2 33012892 33013180 -217674674 + AluY SINE Alu 1 286 -25 207 171 0 0 chr2 33013180 33013207 -217674647 + (CAA)n Simple_repeat Simple_repeat 13 42 0 409 269 60 15 chr2 33014132 33014266 -217673588 - MIR SINE MIR -1 261 122 302 270 235 0 chr2 33014281 33014396 -217673458 - MIR SINE MIR -74 188 47 1908 116 9 78 chr2 33014568 33014751 -217673103 - MER44D DNA MER2_type -1882 609 415 2226 94 0 13 chr2 33014751 33015050 -217672804 - AluSx SINE Alu -17 295 1 1908 116 9 78 chr2 33015050 33015211 -217672643 - MER44D DNA MER2_type -2076 415 19 2279 99 0 3 chr2 33015211 33015504 -217672350 + AluSq SINE Alu 1 292 -21 270 0 0 0 chr2 33015597 33015627 -217672227 + (TG)n Simple_repeat Simple_repeat 1 30 0 253 133 0 0 chr2 33015627 33015672 -217672182 - LTR66 LTR ERVL -172 438 394 267 239 0 0 chr2 33015674 33015741 -217672113 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 328 348 89 8 chr2 33016149 33016396 -217671458 + L1ME LINE L1 5558 5824 -342 24 0 0 0 chr2 33016551 33016575 -217671279 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 33016761 33016782 -217671072 + AT_rich Low_complexity Low_complexity 1 21 0 1985 138 0 0 chr2 33017098 33017408 -217670446 - AluSx SINE Alu 0 310 1 977 214 6 0 chr2 33017410 33017578 -217670276 - FAM SINE Alu -6 169 1 35 0 0 0 chr2 33017779 33017814 -217670040 + AT_rich Low_complexity Low_complexity 1 35 0 1868 149 3 23 chr2 33017814 33018116 -217669738 - AluJo SINE Alu -16 296 1 2397 87 0 0 chr2 33018359 33018659 -217669195 - AluSg SINE Alu -10 300 1 2063 123 3 7 chr2 33021951 33022251 -217665603 - AluSx SINE Alu -13 299 1 305 222 69 0 chr2 33022260 33022332 -217665522 - L1MB8 LINE L1 0 6178 6102 1965 133 20 0 chr2 33022342 33022636 -217665218 - AluSx SINE Alu -12 300 1 1700 152 69 4 chr2 33022704 33022981 -217664873 - AluJb SINE Alu -14 298 4 584 121 0 0 chr2 33023569 33023652 -217664202 + AluY SINE Alu 1 83 -227 1775 155 0 24 chr2 33024154 33024450 -217663404 + AluJb SINE Alu 1 289 -23 2326 94 10 7 chr2 33025208 33025515 -217662339 + AluSq SINE Alu 1 308 -5 2359 112 0 0 chr2 33026000 33026312 -217661542 - AluSx SINE Alu 0 312 1 780 118 39 0 chr2 33026327 33026454 -217661400 - AluSq/x SINE Alu -180 132 1 2258 102 13 3 chr2 33027195 33027500 -217660354 - AluSx SINE Alu -4 308 1 467 107 0 0 chr2 33028295 33028370 -217659484 + AluJ/FRAM SINE Alu 233 307 -5 2459 57 0 0 chr2 33028746 33029044 -217658810 - AluY SINE Alu -13 298 1 2171 98 7 3 chr2 33029088 33029383 -217658471 - AluSq SINE Alu -17 296 1 183 146 0 0 chr2 33029460 33029501 -217658353 + (T)n Simple_repeat Simple_repeat 1 41 0 1885 143 3 7 chr2 33029527 33029821 -217658033 - AluSx SINE Alu -19 293 1 693 207 0 37 chr2 33029991 33030126 -217657728 - FLAM_A SINE Alu -3 130 1 2170 132 0 3 chr2 33030259 33030570 -217657284 + AluSg SINE Alu 1 310 0 24 53 0 0 chr2 33030937 33030975 -217656879 + AT_rich Low_complexity Low_complexity 1 38 0 1843 141 10 33 chr2 33031053 33031219 -217656635 - AluSq SINE Alu -15 298 141 2306 106 3 0 chr2 33031219 33031522 -217656332 - AluSp SINE Alu -9 304 1 1843 141 10 33 chr2 33031522 33031660 -217656194 - AluSq SINE Alu -172 141 1 192 77 0 0 chr2 33031740 33031766 -217656088 + (A)n Simple_repeat Simple_repeat 1 26 0 1405 139 55 90 chr2 33031772 33032052 -217655802 + MER2 DNA MER2_type 13 280 -65 2065 116 51 0 chr2 33032052 33032346 -217655508 + AluSp SINE Alu 1 309 -4 1405 139 55 90 chr2 33032346 33032410 -217655444 + MER2 DNA MER2_type 280 345 0 2068 127 0 0 chr2 33032427 33032737 -217655117 + AluSx SINE Alu 1 310 0 309 293 108 19 chr2 33034474 33034631 -217653223 + MIR SINE MIR 56 226 -36 191 200 78 11 chr2 33034786 33034876 -217652978 + CT-rich Low_complexity Low_complexity 1 96 0 2143 116 7 3 chr2 33034876 33035178 -217652676 - AluSq SINE Alu -10 303 1 1627 173 13 46 chr2 33035178 33035485 -217652369 - AluJb SINE Alu -15 297 1 2036 154 3 0 chr2 33035814 33036119 -217651735 - AluSx SINE Alu -4 308 3 760 240 78 5 chr2 33036306 33036510 -217651344 - MIR SINE MIR -13 249 31 1209 153 0 0 chr2 33036829 33037012 -217650842 + AluSg/x SINE Alu 123 305 -7 4134 227 75 47 chr2 33037922 33038549 -217649305 - L1MEc LINE L1 -2168 4476 3868 2085 151 7 0 chr2 33038549 33038853 -217649001 - AluSx SINE Alu -6 306 1 4134 227 75 47 chr2 33038853 33039137 -217648717 - L1MEc LINE L1 -2776 3868 3593 2256 101 10 0 chr2 33039137 33039443 -217648411 - AluSc SINE Alu 0 309 1 4134 227 75 47 chr2 33039443 33040457 -217647397 - L1MEc LINE L1 -3051 3593 2532 465 291 67 21 chr2 33040701 33040981 -217646873 - L1ME3A LINE L1 -218 5952 5653 1875 111 42 17 chr2 33040981 33041269 -217646585 - AluSx SINE Alu -17 295 1 465 291 67 21 chr2 33041269 33041315 -217646539 - L1ME3A LINE L1 -517 5653 5611 1415 185 73 17 chr2 33041340 33041697 -217646157 - L1MB4 LINE L1 -12 6168 5792 2332 205 84 29 chr2 33041714 33042402 -217645452 + MER44D DNA MER2_type 8 605 0 2155 168 46 36 chr2 33042410 33042558 -217645296 - L1MB4 LINE L1 -433 5747 5602 2063 112 7 0 chr2 33042558 33042852 -217645002 - AluSq SINE Alu -17 296 1 2155 168 46 36 chr2 33042852 33043318 -217644536 - L1MB4 LINE L1 -578 5602 5127 757 244 20 34 chr2 33043307 33043602 -217644252 - L1MEc LINE L1 -5252 1290 1000 * 254 233 178 77 chr2 33043873 33044160 -217643694 - L1MEc LINE L1 -6036 610 295 702 261 89 46 chr2 33044321 33044361 -217643493 - L1M4c LINE L1 -4468 2670 2633 2386 92 0 3 chr2 33044361 33044664 -217643190 + AluSx SINE Alu 1 302 -10 702 261 89 46 chr2 33044664 33045309 -217642545 - L1M4c LINE L1 -4505 2633 1877 2222 77 0 11 chr2 33045315 33045626 -217642228 - AluSq SINE Alu 0 308 1 332 266 114 29 chr2 33045626 33045780 -217642074 - L1M4c LINE L1 -5248 1611 1471 180 0 0 0 chr2 33045780 33045800 -217642054 + (TG)n Simple_repeat Simple_repeat 2 21 0 332 266 114 29 chr2 33045800 33045941 -217641913 - L1M4c LINE L1 -5388 1471 1286 417 250 62 8 chr2 33046842 33046970 -217640884 + MIR SINE MIR 127 261 -1 23 33 0 0 chr2 33047341 33047371 -217640483 + AT_rich Low_complexity Low_complexity 1 30 0 29 28 0 0 chr2 33048218 33048254 -217639600 + AT_rich Low_complexity Low_complexity 1 36 0 195 42 0 0 chr2 33048843 33048867 -217638987 + (T)n Simple_repeat Simple_repeat 1 24 0 2404 106 0 0 chr2 33049224 33049536 -217638318 - AluSx SINE Alu 0 312 1 1343 287 155 26 chr2 33049832 33050175 -217637679 - L2 LINE L2 -102 3211 2914 2023 133 3 7 chr2 33050175 33050468 -217637386 + AluSx SINE Alu 2 293 -19 1343 287 155 26 chr2 33050468 33050515 -217637339 - L2 LINE L2 -399 2914 2874 1880 185 0 10 chr2 33050515 33050818 -217637036 + AluJb SINE Alu 1 300 -12 1343 287 155 26 chr2 33050818 33051320 -217636534 - L2 LINE L2 -439 2874 2190 182 211 0 26 chr2 33051348 33051386 -217636468 + MER5A DNA MER1_type 59 95 -94 1172 165 80 88 chr2 33052465 33052614 -217635240 - MER2 DNA MER2_type -5 340 191 1649 158 7 47 chr2 33052614 33052911 -217634943 + AluJo SINE Alu 9 293 -19 1172 165 80 88 chr2 33052911 33053100 -217634754 - MER2 DNA MER2_type -154 191 5 220 300 0 0 chr2 33053106 33053166 -217634688 + (TG)n Simple_repeat Simple_repeat 1 60 0 231 296 57 0 chr2 33053178 33053266 -217634588 - MER5B DNA MER1_type -80 98 6 1929 118 66 0 chr2 33054614 33054903 -217632951 - AluSx SINE Alu -4 308 1 1709 190 3 7 chr2 33054920 33055230 -217632624 - AluSx SINE Alu -3 309 1 1405 138 30 9 chr2 33055585 33055816 -217632038 - MER46A DNA MER2_type 0 236 1 185 227 182 0 chr2 33055863 33055907 -217631947 - L2 LINE L2 -33 3239 3188 895 131 0 0 chr2 33056002 33056132 -217631722 - FLAM_C SINE Alu -3 130 1 2386 62 7 10 chr2 33056596 33056900 -217630954 - AluY SINE Alu -8 303 1 558 228 214 34 chr2 33056903 33057109 -217630745 - MIR SINE MIR -18 244 2 204 208 0 42 chr2 33057110 33057158 -217630696 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 255 61 0 0 chr2 33057216 33057249 -217630605 + (TG)n Simple_repeat Simple_repeat 2 34 0 2083 119 3 13 chr2 33057916 33058218 -217629636 - AluSx SINE Alu -13 299 1 1665 169 11 7 chr2 33058792 33059099 -217628755 - AluSg SINE Alu 0 309 2 188 355 55 0 chr2 33059604 33059714 -217628140 + L2 LINE L2 3167 3282 -31 595 263 0 0 chr2 33059747 33059880 -217627974 + FLAM_A SINE Alu 1 133 0 1634 163 28 31 chr2 33060911 33061237 -217626617 - MER44D DNA MER2_type -4 605 11 21 0 0 0 chr2 33062072 33062093 -217625761 + AT_rich Low_complexity Low_complexity 1 21 0 1320 162 142 3 chr2 33062138 33062440 -217625414 + L1MA4 LINE L1 5952 6295 -5 530 167 0 0 chr2 33062644 33062728 -217625126 + AluJ/FLAM SINE Alu 1 84 -228 2306 88 7 0 chr2 33063900 33064196 -217623658 - AluSp SINE Alu -15 298 1 6402 79 19 33 chr2 33064792 33066733 -217621121 - SVA Other Other -520 1386 7 2091 76 62 4 chr2 33068237 33068513 -217619341 + AluY SINE Alu 1 292 -19 506 348 128 25 chr2 33068592 33068710 -217619144 + L2 LINE L2 2409 2513 -801 1825 177 30 15 chr2 33068710 33069049 -217618805 + MER2 DNA MER2_type 1 344 0 506 348 128 25 chr2 33069049 33069338 -217618516 + L2 LINE L2 2513 2858 -456 3515 220 164 4 chr2 33069358 33070550 -217617304 + Charlie1a DNA MER1_type 3 1454 -1 184 287 202 0 chr2 33070833 33070927 -217616927 + L2 LINE L2 3192 3304 -9 2302 78 7 10 chr2 33073137 33073443 -217614411 + AluY SINE Alu 1 305 -6 1476 123 0 26 chr2 33073455 33073682 -217614172 + AluSg/x SINE Alu 77 297 -15 642 241 113 126 chr2 33074021 33074594 -217613260 - L1ME3A LINE L1 -18 6221 5656 257 286 36 0 chr2 33074696 33074808 -217613046 - L1ME3A LINE L1 -3433 2782 2667 895 241 41 57 chr2 33074913 33074972 -217612882 - L1MEc LINE L1 -3691 2524 2466 591 202 65 0 chr2 33074972 33075096 -217612758 - FLAM_A SINE Alu -1 132 1 895 241 41 57 chr2 33075096 33075485 -217612369 - L1MEc LINE L1 -3749 2466 2132 21 0 0 0 chr2 33075660 33075681 -217612173 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 33075989 33076011 -217611843 + AT_rich Low_complexity Low_complexity 1 22 0 278 219 45 120 chr2 33076218 33076460 -217611394 - L1MEc LINE L1 -4925 1471 1248 1675 186 16 7 chr2 33076724 33077030 -217610824 - AluSx SINE Alu -3 309 1 556 191 66 95 chr2 33077132 33077511 -217610343 - L1MB7 LINE L1 -77 6107 5634 651 234 75 108 chr2 33077523 33078174 -217609680 - L1MB7 LINE L1 -1441 4705 4076 453 58 14 72 chr2 33078174 33078313 -217609541 + (TA)n Simple_repeat Simple_repeat 2 132 0 2157 112 10 0 chr2 33078313 33078617 -217609237 - AluSx SINE Alu -5 307 1 1083 134 0 0 chr2 33079034 33079213 -217608641 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 1579 172 42 0 chr2 33079245 33079384 -217608470 - AluSx SINE Alu -39 273 141 360 0 0 0 chr2 33079384 33079424 -217608430 + (TG)n Simple_repeat Simple_repeat 2 41 0 1579 172 42 0 chr2 33079424 33079546 -217608308 - AluSx SINE Alu -171 141 1 211 284 233 0 chr2 33079762 33079878 -217607976 + MIR SINE MIR 18 160 -102 25 0 0 0 chr2 33080081 33080106 -217607748 + AT_rich Low_complexity Low_complexity 1 25 0 2025 131 7 0 chr2 33080715 33081013 -217606841 + AluSx SINE Alu 1 300 -12 2012 137 9 49 chr2 33081829 33082179 -217605675 + MER1B DNA MER1_type 2 337 0 183 139 0 0 chr2 33082580 33082616 -217605238 + (CAG)n Simple_repeat Simple_repeat 1 36 0 24 0 0 0 chr2 33083221 33083245 -217604609 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 33083290 33083310 -217604544 + (T)n Simple_repeat Simple_repeat 1 20 0 786 190 0 65 chr2 33084854 33084878 -217602976 - FAM SINE Alu -139 172 148 2352 77 0 0 chr2 33084878 33085177 -217602677 + AluY SINE Alu 1 299 -12 786 190 0 65 chr2 33085177 33085336 -217602518 - FAM SINE Alu -163 148 1 23 54 0 0 chr2 33085843 33085880 -217601974 + AT_rich Low_complexity Low_complexity 1 37 0 1999 116 0 7 chr2 33090133 33090409 -217597445 - AluSx SINE Alu -38 274 1 22 0 0 0 chr2 33091289 33091311 -217596543 + AT_rich Low_complexity Low_complexity 1 22 0 184 286 0 36 chr2 33091390 33091446 -217596408 + MIR SINE MIR 91 144 -64 396 0 0 0 chr2 33091747 33091791 -217596063 + (TG)n Simple_repeat Simple_repeat 2 45 0 1764 171 3 13 chr2 33091792 33092096 -217595758 - AluJo SINE Alu -11 301 1 25 51 0 0 chr2 33092186 33092225 -217595629 + AT_rich Low_complexity Low_complexity 1 39 0 500 262 47 33 chr2 33092496 33092710 -217595144 + L1MC4 LINE L1 7683 7899 -143 1035 142 228 14 chr2 33093002 33093221 -217594633 + AluSg1 SINE Alu 35 300 -9 985 223 93 30 chr2 33093450 33093792 -217594062 + L1MD2 LINE L1 5972 7798 -10 25 90 0 0 chr2 33093916 33093983 -217593871 + AT_rich Low_complexity Low_complexity 1 67 0 888 161 0 0 chr2 33095657 33095794 -217592060 + FLAM_C SINE Alu 1 137 -6 24 0 0 0 chr2 33095958 33095982 -217591872 + AT_rich Low_complexity Low_complexity 1 24 0 1984 112 17 7 chr2 33096101 33096396 -217591458 + AluSc SINE Alu 3 300 -9 418 333 102 27 chr2 33097085 33097310 -217590544 + MIR SINE MIR 14 255 -7 218 213 0 0 chr2 33097984 33098031 -217589823 + T-rich Low_complexity Low_complexity 1 47 0 2196 119 0 3 chr2 33098669 33098980 -217588874 - AluSg SINE Alu 0 310 1 2308 103 0 0 chr2 33099525 33099827 -217588027 + AluY SINE Alu 1 302 -9 1921 149 3 0 chr2 33100961 33101257 -217586597 - AluSx SINE Alu -15 297 1 21 36 0 0 chr2 33101300 33101328 -217586526 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 33101352 33101376 -217586478 + AT_rich Low_complexity Low_complexity 1 24 0 1653 236 96 31 chr2 33101421 33101997 -217585857 - L1MC4 LINE L1 -141 7901 7289 390 205 0 7 chr2 33102022 33102104 -217585750 - AluSx SINE Alu -28 272 197 634 170 0 0 chr2 33102110 33102216 -217585638 - AluSx SINE Alu -207 106 1 1907 124 19 10 chr2 33102311 33102618 -217585236 + AluSx SINE Alu 1 310 -2 345 178 0 75 chr2 33102704 33102741 -217585113 - L1MB3 LINE L1 0 6183 6145 598 220 23 15 chr2 33102741 33102873 -217584981 - FLAM_A SINE Alu 0 133 1 345 178 0 75 chr2 33102873 33102942 -217584912 - L1MB3 LINE L1 -38 6145 6085 1291 276 108 25 chr2 33102950 33103440 -217584414 - L1MC4 LINE L1 -1040 7002 6472 827 168 13 0 chr2 33104284 33104433 -217583421 - MER58B DNA MER1_type -8 333 183 208 319 239 0 chr2 33104890 33105003 -217582851 - L3 LINE CR1 -50 1527 1388 515 266 18 0 chr2 33105202 33105315 -217582539 - MER5B DNA MER1_type -63 115 1 1142 194 5 14 chr2 33106102 33106318 -217581536 + AluJo SINE Alu 5 218 -94 26 30 0 0 chr2 33107060 33107093 -217580761 + AT_rich Low_complexity Low_complexity 1 33 0 40 73 0 0 chr2 33107466 33107548 -217580306 + AT_rich Low_complexity Low_complexity 1 82 0 934 153 89 0 chr2 33107569 33107726 -217580128 + AluSx SINE Alu 1 171 -141 1770 137 47 0 chr2 33108305 33108582 -217579272 + AluSx SINE Alu 1 290 -22 268 258 175 0 chr2 33110282 33110379 -217577475 - L2 LINE L2 0 3313 3200 226 348 22 0 chr2 33111129 33111221 -217576633 + MIR SINE MIR 57 150 -112 2309 82 0 0 chr2 33112272 33112565 -217575289 - AluSc SINE Alu -16 293 1 1400 168 7 56 chr2 33112659 33112963 -217574891 + AluJo SINE Alu 1 289 -23 1076 274 56 59 chr2 33113557 33113880 -217573974 - L1MEc LINE L1 -896 5319 4997 2131 72 35 14 chr2 33113880 33114170 -217573684 - AluY SINE Alu -15 296 1 1076 274 56 59 chr2 33114170 33114273 -217573581 - L1MEc LINE L1 -1218 4997 4895 1843 152 14 0 chr2 33114273 33114563 -217573291 - AluSx SINE Alu -18 294 1 1076 274 56 59 chr2 33114563 33114849 -217573005 - L1MEc LINE L1 -1320 4895 4608 739 302 24 39 chr2 33114842 33115223 -217572631 - L1MEc LINE L1 -1925 4290 3916 * 414 286 25 34 chr2 33115224 33115343 -217572511 - FLAM_A SINE Alu -11 122 5 428 265 211 8 chr2 33115455 33115848 -217572006 - L1MEc LINE L1 -2544 3671 3199 693 247 76 35 chr2 33115927 33116100 -217571754 - L1MEc LINE L1 -4124 2272 2108 1394 175 52 28 chr2 33116100 33116391 -217571463 - AluSx SINE Alu -14 298 1 693 247 76 35 chr2 33116391 33116586 -217571268 - L1MEc LINE L1 -4288 2108 1889 23 0 0 0 chr2 33116595 33116618 -217571236 + AT_rich Low_complexity Low_complexity 1 23 0 1487 198 24 3 chr2 33116631 33116919 -217570935 - AluSg SINE Alu -16 294 1 848 138 0 22 chr2 33116919 33117057 -217570797 - AluSq/x SINE Alu -177 135 1 312 70 0 0 chr2 33117539 33117582 -217570272 + (TC)n Simple_repeat Simple_repeat 2 44 0 503 148 0 0 chr2 33118379 33118460 -217569394 - AluSq SINE Alu -99 214 134 1258 111 25 64 chr2 33118460 33118634 -217569220 - AluSg/x SINE Alu -14 298 134 2152 123 7 3 chr2 33118634 33118944 -217568910 - AluSx SINE Alu -1 311 1 1258 111 25 64 chr2 33118944 33119004 -217568850 - AluSg/x SINE Alu -178 134 73 832 102 0 0 chr2 33119602 33119710 -217568144 - AluSq/x SINE Alu -205 108 1 2238 89 7 0 chr2 33121448 33121761 -217566093 - AluSq SINE Alu 0 315 1 1304 172 94 4 chr2 33121924 33122069 -217565785 - AluSx SINE Alu -21 291 160 399 21 0 0 chr2 33122069 33122117 -217565737 + (TG)n Simple_repeat Simple_repeat 2 49 0 1304 172 94 4 chr2 33122117 33122238 -217565616 - AluSx SINE Alu -152 160 1 2395 63 0 16 chr2 33122425 33122753 -217565101 + AluY SINE Alu 1 311 0 1586 167 24 10 chr2 33123899 33124187 -217563667 - AluJo SINE Alu -20 292 1 284 300 164 0 chr2 33124788 33124928 -217562926 + MIR SINE MIR 11 173 -89 1961 161 0 13 chr2 33125187 33125503 -217562351 + AluSx SINE Alu 1 312 0 243 0 0 0 chr2 33126316 33126343 -217561511 + (T)n Simple_repeat Simple_repeat 1 27 0 1779 118 65 0 chr2 33126842 33127121 -217560733 + AluY SINE Alu 1 297 -14 2050 140 0 0 chr2 33127292 33127592 -217560262 - AluSg SINE Alu -10 300 1 1610 121 125 8 chr2 33128170 33128418 -217559436 - AluSg1 SINE Alu -32 277 1 342 67 0 0 chr2 33129223 33129268 -217558586 + (T)n Simple_repeat Simple_repeat 1 45 0 2039 103 3 68 chr2 33129348 33129669 -217558185 - AluY SINE Alu -11 300 1 27 29 0 0 chr2 33129840 33129874 -217557980 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 33130027 33130048 -217557806 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 33130552 33130580 -217557274 + AT_rich Low_complexity Low_complexity 1 28 0 355 259 46 46 chr2 33130587 33130718 -217557136 + MER20B DNA MER1_type 52 182 -601 1462 148 53 42 chr2 33131537 33131668 -217556186 + AluJo SINE Alu 5 133 -179 2277 92 0 3 chr2 33131668 33131960 -217555894 + AluSg SINE Alu 1 291 -19 1462 148 53 42 chr2 33131960 33132111 -217555743 + AluJo SINE Alu 133 290 -22 1169 226 0 15 chr2 33132113 33132379 -217555475 + AluJo SINE Alu 36 297 -15 192 125 0 0 chr2 33132849 33132881 -217554973 + (TA)n Simple_repeat Simple_repeat 2 33 0 2271 109 0 7 chr2 33134271 33134573 -217553281 + AluSx SINE Alu 1 300 -12 414 75 0 0 chr2 33134593 33134646 -217553208 + Alu SINE Alu 241 293 -17 26 64 0 0 chr2 33134706 33134753 -217553101 + AT_rich Low_complexity Low_complexity 1 47 0 25 31 0 0 chr2 33135025 33135057 -217552797 + AT_rich Low_complexity Low_complexity 1 32 0 1682 169 0 36 chr2 33135088 33135389 -217552465 + AluJb SINE Alu 1 290 -22 1133 165 55 77 chr2 33135631 33135904 -217551950 - AluJb SINE Alu -29 283 17 2100 118 0 16 chr2 33137544 33137857 -217549997 - AluSx SINE Alu -4 308 1 181 347 40 0 chr2 33137920 33137995 -217549859 - L2 LINE L2 -19 3253 3176 315 311 61 23 chr2 33138177 33138309 -217549545 - L2 LINE L2 -1004 2310 2174 26 0 0 0 chr2 33138417 33138443 -217549411 + AT_rich Low_complexity Low_complexity 1 26 0 1814 156 11 0 chr2 33138575 33138858 -217548996 + AluSx SINE Alu 1 286 -26 497 96 12 0 chr2 33139349 33139432 -217548422 + FLAM_A SINE Alu 59 142 0 2132 107 9 35 chr2 33139502 33139819 -217548035 - AluSx SINE Alu -3 309 1 246 326 61 11 chr2 33139863 33140044 -217547810 - L1MEc LINE L1 -4907 1477 1288 817 212 53 12 chr2 33140240 33140485 -217547369 - L1MEc LINE L1 -5511 1052 798 231 195 110 37 chr2 33140537 33140619 -217547235 + Charlie5 DNA MER1_type 35 122 -2490 685 286 125 21 chr2 33140762 33141185 -217546669 - L1MEc LINE L1 -5873 690 224 25 75 0 0 chr2 33141236 33141289 -217546565 + AT_rich Low_complexity Low_complexity 1 53 0 1623 199 34 0 chr2 33141811 33142102 -217545752 + AluJb SINE Alu 1 301 -11 207 328 216 29 chr2 33142462 33142633 -217545221 + MIR SINE MIR 41 243 -19 22 35 0 0 chr2 33143192 33143221 -217544633 + AT_rich Low_complexity Low_complexity 1 29 0 15494 129 48 17 chr2 33144109 33146260 -217541594 + Tigger4(Zombi) DNA MER2_type 1 2250 -481 2330 99 0 0 chr2 33146260 33146563 -217541291 - AluSq SINE Alu -10 303 1 15494 129 48 17 chr2 33146563 33147060 -217540794 + Tigger4(Zombi) DNA MER2_type 2250 2730 -1 301 157 0 71 chr2 33147195 33147265 -217540589 - BSR/Beta Satellite Satellite -33 109 45 * 692 253 60 0 chr2 33147249 33147415 -217540439 + MER58A DNA MER1_type 34 209 -15 326 231 147 45 chr2 33148236 33148260 -217539594 - L1ME4a LINE L1 -238 5883 5863 1960 138 3 0 chr2 33148260 33148549 -217539305 - AluSx SINE Alu -22 290 1 326 231 147 45 chr2 33148549 33148680 -217539174 - L1ME4a LINE L1 -258 5863 5712 291 283 0 12 chr2 33149065 33149186 -217538668 - MER5A DNA MER1_type 0 189 13 333 0 0 0 chr2 33150174 33150211 -217537643 + (TG)n Simple_repeat Simple_repeat 1 37 0 1757 216 47 20 chr2 33150244 33150694 -217537160 - MLT1C LTR MaLR -5 462 1 2173 214 25 101 chr2 33150914 33151624 -217536230 + MLT1-int LTR MaLR 5 660 -711 351 177 0 0 chr2 33151677 33151739 -217536115 + MLT1-int LTR MaLR 661 722 -649 1130 205 57 4 chr2 33151749 33151978 -217535876 + MLT1D LTR MaLR 265 505 0 284 216 135 0 chr2 33151982 33152056 -217535798 - L1M4 LINE L1 -2440 3706 3623 2144 113 0 0 chr2 33152147 33152431 -217535423 + AluSq SINE Alu 17 300 -13 380 282 84 93 chr2 33152454 33152488 -217535366 + L1M4c LINE L1 1136 1169 -5215 2462 90 0 0 chr2 33152488 33152799 -217535055 + AluSx SINE Alu 1 311 -1 380 282 84 93 chr2 33152799 33153065 -217534789 + L1M4c LINE L1 1169 1433 -4951 623 199 7 29 chr2 33153065 33153201 -217534653 + FLAM_A SINE Alu 1 133 0 380 282 84 93 chr2 33153201 33153328 -217534526 + L1M4c LINE L1 1433 1560 -4824 7392 31 2 0 chr2 33153349 33155231 -217532623 - L1PA4 LINE L1 0 6155 4221 2099 29 85 0 chr2 33155230 33155502 -217532352 + L1P LINE L1 2544 2838 -3308 * 2389 62 7 3 chr2 33155724 33156030 -217531824 + AluY SINE Alu 1 307 -4 244 313 148 68 chr2 33156030 33156429 -217531425 + L1ME LINE L1 229 659 -5546 1654 127 93 4 chr2 33156688 33156947 -217530907 + AluSx SINE Alu 1 282 -30 294 73 0 0 chr2 33156948 33156989 -217530865 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 323 267 0 11 chr2 33156996 33157086 -217530768 + L1ME LINE L1 2271 2359 -4037 1968 260 99 15 chr2 33157148 33158107 -217529747 + L1ME LINE L1 2449 3488 -2727 394 321 51 33 chr2 33158662 33158936 -217528918 - L1ME3 LINE L1 -203 5959 5681 779 211 126 82 chr2 33159804 33160146 -217527708 - L1MC4 LINE L1 -142 7900 7544 2069 248 86 8 chr2 33160151 33160800 -217527054 + L1MC4 LINE L1 6658 7357 -685 2050 128 24 0 chr2 33160841 33161139 -217526715 - AluSx SINE Alu -7 305 1 201 147 0 0 chr2 33162509 33162543 -217525311 + (T)n Simple_repeat Simple_repeat 1 34 0 23 54 0 0 chr2 33162557 33162594 -217525260 + AT_rich Low_complexity Low_complexity 1 37 0 333 192 0 0 chr2 33162817 33162869 -217524985 - Tigger2 DNA MER2_type -2666 52 1 413 172 21 0 chr2 33162947 33163040 -217524814 - L1MA4A LINE L1 -5 6298 6204 329 283 131 7 chr2 33164239 33164337 -217523517 + L1ME LINE L1 4200 4285 -1930 2241 117 0 0 chr2 33164337 33164637 -217523217 + AluSq SINE Alu 1 300 -13 329 283 131 7 chr2 33164637 33164821 -217523033 + L1ME LINE L1 4285 4517 -1698 1240 179 0 0 chr2 33164838 33165033 -217522821 + AluSx SINE Alu 3 197 -115 316 255 132 9 chr2 33165091 33165197 -217522657 + L1ME LINE L1 4630 4748 -1467 1904 195 99 2 chr2 33165386 33165822 -217522032 - L1MB5 LINE L1 -155 6019 5542 24 32 0 0 chr2 33166091 33166122 -217521732 + AT_rich Low_complexity Low_complexity 1 31 0 805 68 10 0 chr2 33166405 33166508 -217521346 - AluSg/x SINE Alu -8 301 198 2103 114 3 3 chr2 33166539 33166829 -217521025 + AluSq SINE Alu 1 290 -23 21 36 0 0 chr2 33167198 33167226 -217520628 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 33168556 33168577 -217519277 + AT_rich Low_complexity Low_complexity 1 21 0 253 222 0 0 chr2 33169219 33169282 -217518572 + (TAAA)n Simple_repeat Simple_repeat 4 66 0 1922 154 3 0 chr2 33169329 33169621 -217518233 - AluSx SINE Alu -19 293 1 575 226 39 0 chr2 33169782 33169937 -217517917 - L1MC4 LINE L1 -372 7670 7510 540 163 0 0 chr2 33170761 33170847 -217517007 + AluSg/x SINE Alu 206 291 -19 237 238 0 0 chr2 33170894 33170957 -217516897 + (TTTA)n Simple_repeat Simple_repeat 4 66 0 1452 87 0 0 chr2 33171083 33171267 -217516587 + AluSp SINE Alu 130 313 0 2020 108 3 24 chr2 33171427 33171722 -217516132 - AluSx SINE Alu -12 300 12 27 29 0 0 chr2 33173077 33173111 -217514743 + AT_rich Low_complexity Low_complexity 1 34 0 713 185 59 0 chr2 33173278 33173397 -217514457 + AluJo SINE Alu 9 134 -178 2025 98 41 3 chr2 33173398 33173693 -217514161 + AluSg SINE Alu 1 306 -4 1265 127 229 0 chr2 33173728 33173973 -217513881 + AluJb SINE Alu 1 301 -11 1946 127 38 3 chr2 33174706 33174998 -217512856 + AluSx SINE Alu 1 302 -10 351 191 0 0 chr2 33176341 33176404 -217511450 - L1MA10 LINE L1 -19 6315 6253 22 0 0 0 chr2 33177757 33177779 -217510075 + AT_rich Low_complexity Low_complexity 1 22 0 2047 102 28 7 chr2 33177779 33178062 -217509792 + AluSx SINE Alu 1 289 -23 1328 212 52 7 chr2 33178620 33178908 -217508946 - AluJo SINE Alu -11 301 1 2278 92 0 0 chr2 33178957 33179250 -217508604 + AluSg SINE Alu 1 293 -17 2055 141 7 0 chr2 33179270 33179576 -217508278 - AluSx SINE Alu -1 311 4 31 0 0 0 chr2 33179763 33179794 -217508060 + AT_rich Low_complexity Low_complexity 1 31 0 2259 92 3 0 chr2 33179803 33180095 -217507759 + AluSg SINE Alu 2 294 -16 21 0 0 0 chr2 33180276 33180297 -217507557 + AT_rich Low_complexity Low_complexity 1 21 0 2932 149 71 18 chr2 33180353 33180958 -217506896 - L1MC2 LINE L1 -31 6313 5677 641 289 48 4 chr2 33180950 33181178 -217506676 - L1M4 LINE L1 -1317 4829 4592 * 21 57 0 0 chr2 33181524 33181559 -217506295 + AT_rich Low_complexity Low_complexity 1 35 0 1681 244 22 34 chr2 33181674 33181836 -217506018 - L1MB8 LINE L1 -2 6176 6014 2351 96 3 0 chr2 33181836 33182139 -217505715 + AluSq SINE Alu 1 304 -9 1681 244 22 34 chr2 33182139 33182715 -217505139 - L1MB8 LINE L1 -164 6014 5324 1298 235 38 93 chr2 33182707 33183180 -217504674 - L1M4b LINE L1 -6392 467 21 * 2721 117 14 0 chr2 33183679 33184047 -217503807 - THE1C LTR MaLR -2 373 1 494 197 0 0 chr2 33184311 33184387 -217503467 - AluJ/FRAM SINE Alu -21 291 216 1518 179 33 7 chr2 33184418 33184692 -217503162 - AluJo SINE Alu -31 281 1 2123 120 17 0 chr2 33185009 33185309 -217502545 - AluSx SINE Alu -7 305 1 813 219 91 0 chr2 33185431 33185618 -217502236 + MER3 DNA MER1_type 6 209 0 2260 96 0 35 chr2 33185859 33186171 -217501683 + AluY SINE Alu 1 301 -10 1595 180 3 7 chr2 33186270 33186554 -217501300 + AluJb SINE Alu 23 305 -7 2015 142 3 0 chr2 33186602 33186897 -217500957 + AluSq SINE Alu 1 296 -17 458 161 25 0 chr2 33186914 33186995 -217500859 - L1PB3 LINE L1 -59 6095 6013 1893 148 3 20 chr2 33187024 33187328 -217500526 - AluSx SINE Alu -13 299 1 3113 186 43 36 chr2 33187328 33187396 -217500458 - L1M4 LINE L1 -1681 4465 4399 1601 194 7 16 chr2 33187396 33187705 -217500149 - AluJo SINE Alu 0 312 7 3113 186 43 36 chr2 33187705 33188333 -217499521 - L1M4 LINE L1 -1747 4399 3764 25 31 0 0 chr2 33188333 33188365 -217499489 + AT_rich Low_complexity Low_complexity 1 32 0 895 170 0 0 chr2 33188382 33188523 -217499331 - AluSq/x SINE Alu -172 141 1 2000 127 3 3 chr2 33188524 33188838 -217499016 - AluSx SINE Alu 0 314 1 1245 206 58 8 chr2 33188862 33189001 -217498853 - AluJo SINE Alu -37 275 144 243 0 0 0 chr2 33189001 33189028 -217498826 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1245 206 58 8 chr2 33189028 33189145 -217498709 - AluJo SINE Alu -168 144 6 963 220 24 4 chr2 33189145 33189395 -217498459 - L1M4 LINE L1 -2351 3795 3541 829 224 60 35 chr2 33189659 33189961 -217497893 + MLT2D LTR ERVL 1 511 -43 211 276 78 26 chr2 33190355 33190471 -217497383 - L2 LINE L2 -817 2497 2376 487 239 46 23 chr2 33192156 33192286 -217495568 - AluJb SINE Alu -37 275 143 1847 156 10 23 chr2 33192292 33192599 -217495255 - AluSx SINE Alu -9 303 1 2110 138 0 3 chr2 33192666 33192970 -217494884 + AluJb SINE Alu 1 303 -9 284 180 67 4 chr2 33193414 33193526 -217494328 + AluJo SINE Alu 1 136 -166 2517 37 3 13 chr2 33193526 33193824 -217494030 + AluY SINE Alu 1 295 -16 1865 87 0 12 chr2 33193831 33194072 -217493782 + AluY SINE Alu 54 291 -20 833 154 7 20 chr2 33194176 33194325 -217493529 + FRAM SINE Alu 1 40 0 2510 44 0 34 chr2 33194499 33194820 -217493034 + AluY SINE Alu 1 310 -1 2310 31 38 17 chr2 33194937 33195228 -217492626 + AluY SINE Alu 1 297 -14 260 320 0 31 chr2 33196611 33196708 -217491146 + MIR3 SINE MIR 70 163 -45 250 245 286 10 chr2 33196770 33196868 -217490986 - MIR SINE MIR -68 140 16 869 216 12 6 chr2 33197147 33197309 -217490545 - FRAM SINE Alu -16 160 1 225 0 0 0 chr2 33197309 33197334 -217490520 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2195 89 0 3 chr2 33197334 33197616 -217490238 - AluSc SINE Alu -28 281 1 7868 74 2 1 chr2 33197659 33198627 -217489227 + LTR5 LTR ERVK 1 969 0 1947 104 43 4 chr2 33198994 33199273 -217488581 - AluSg SINE Alu -14 296 7 851 308 184 13 chr2 33199302 33199953 -217487901 + L2 LINE L2 2397 3176 -137 2296 103 3 0 chr2 33199954 33200254 -217487600 - AluSg SINE Alu -9 301 1 3431 146 82 63 chr2 33200291 33200895 -217486959 + L1MB8 LINE L1 5417 6039 -139 1794 158 0 14 chr2 33200895 33201179 -217486675 - AluJb SINE Alu -20 292 13 3431 146 82 63 chr2 33201179 33201322 -217486532 + L1MB8 LINE L1 6039 6178 0 488 223 191 0 chr2 33201426 33201583 -217486271 + MIR SINE MIR 52 238 -24 228 182 91 0 chr2 33201591 33201646 -217486208 + L1 LINE L1 3944 4003 -2143 337 233 0 0 chr2 33201651 33201711 -217486143 + MLT1D LTR MaLR 1 60 -445 1224 137 64 5 chr2 33201711 33201915 -217485939 - MLT1A1 LTR MaLR 0 365 150 849 150 0 14 chr2 33201915 33202055 -217485799 - FRAM SINE Alu -6 170 33 345 78 0 0 chr2 33202059 33202110 -217485744 - L1MA3 LINE L1 0 6305 6255 860 161 40 7 chr2 33202112 33202261 -217485593 - MLT1A1 LTR MaLR -211 154 1 1645 101 22 9 chr2 33202388 33202616 -217485238 + AluSq SINE Alu 1 231 -82 363 23 0 0 chr2 33202633 33202677 -217485177 + (TC)n Simple_repeat Simple_repeat 2 45 0 207 0 0 0 chr2 33202676 33202699 -217485155 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 902 223 96 0 chr2 33202710 33203017 -217484837 + L1ME4a LINE L1 5136 5462 -700 281 209 105 9 chr2 33203015 33203120 -217484734 + L1ME4a LINE L1 6002 6116 -5 * 1725 181 0 17 chr2 33203128 33203426 -217484428 + AluJo SINE Alu 1 293 -19 1995 161 24 24 chr2 33203475 33203810 -217484044 - MER1B DNA MER1_type 0 337 3 1800 125 3 66 chr2 33203993 33204319 -217483535 - AluSx SINE Alu 0 307 1 2192 116 0 10 chr2 33204329 33204632 -217483222 - AluSx SINE Alu -12 300 1 278 233 78 22 chr2 33204959 33205049 -217482805 - LTR67 LTR ERVL -453 104 10 2075 139 0 3 chr2 33205049 33205343 -217482511 + AluSx SINE Alu 1 293 -19 292 313 47 16 chr2 33205431 33205559 -217482295 - L3 LINE CR1 -291 1286 1155 439 167 35 11 chr2 33205663 33205837 -217482017 + (TA)n Simple_repeat Simple_repeat 1 178 0 32 26 0 0 chr2 33205841 33205880 -217481974 + AT_rich Low_complexity Low_complexity 1 39 0 2136 110 10 0 chr2 33205954 33206253 -217481601 + AluSq SINE Alu 1 302 -11 1248 107 0 6 chr2 33206255 33206423 -217481431 + AluSg/x SINE Alu 136 302 -8 214 263 141 30 chr2 33206744 33206843 -217481011 - MIR SINE MIR -150 112 3 1530 221 131 13 chr2 33207067 33207519 -217480335 - MLT1D LTR MaLR 0 505 1 375 254 48 63 chr2 33207569 33207612 -217480242 - L1ME4a LINE L1 -13 6108 6066 1737 160 3 21 chr2 33207612 33207962 -217479892 + AluSx SINE Alu 1 345 0 375 254 48 63 chr2 33207962 33208106 -217479748 - L1ME4a LINE L1 -55 6066 5923 2317 109 3 3 chr2 33208727 33209039 -217478815 + AluSx SINE Alu 1 312 0 2411 74 3 3 chr2 33209754 33210053 -217477801 - AluSg SINE Alu -11 299 1 298 269 29 48 chr2 33210085 33210189 -217477665 - MIR3 SINE MIR -6 202 101 254 318 23 0 chr2 33210273 33210361 -217477493 - MIR SINE MIR -73 135 46 915 180 126 24 chr2 33210395 33210719 -217477135 - MLT1B LTR MaLR -2 503 1 341 301 116 14 chr2 33210845 33210991 -217476863 - MIR SINE MIR -74 188 28 493 136 0 0 chr2 33211191 33211257 -217476597 + AluS SINE Alu 1 66 -247 33 0 0 0 chr2 33211257 33211290 -217476564 + AT_rich Low_complexity Low_complexity 1 33 0 2068 142 0 3 chr2 33211412 33211714 -217476140 - AluSx SINE Alu -11 301 1 2480 72 0 0 chr2 33212098 33212405 -217475449 - AluSc SINE Alu -1 308 2 404 203 81 61 chr2 33212416 33212564 -217475290 + Charlie8 DNA MER1_type 61 211 -2206 239 266 109 120 chr2 33212760 33212944 -217474910 + MIR SINE MIR 3 184 -78 795 107 90 25 chr2 33212991 33213113 -217474741 + AluSq/x SINE Alu 2 131 -182 2335 105 0 0 chr2 33213115 33213419 -217474435 + AluSx SINE Alu 1 304 -8 2487 88 0 0 chr2 33213423 33213755 -217474099 + AluY SINE Alu 2 333 0 2103 138 0 3 chr2 33213758 33214069 -217473785 + AluSx SINE Alu 1 310 -2 566 236 0 0 chr2 33214076 33214186 -217473668 + MER96B DNA MER1_type? 307 416 -1 638 309 96 61 chr2 33214187 33214521 -217473333 + L2 LINE L2 2652 2973 -340 2134 120 17 3 chr2 33214521 33214821 -217473033 - AluSx SINE Alu -8 304 1 638 309 96 61 chr2 33214821 33215116 -217472738 + L2 LINE L2 2973 3295 -18 887 153 0 0 chr2 33215123 33215254 -217472600 + FLAM_C SINE Alu 1 131 -2 2037 137 0 13 chr2 33215597 33215896 -217471958 + AluSx SINE Alu 1 295 -17 299 222 22 44 chr2 33216139 33216229 -217471625 + MER5A DNA MER1_type 4 91 -98 272 344 8 33 chr2 33216326 33216448 -217471406 - MER5A DNA MER1_type 0 189 71 378 0 0 0 chr2 33216491 33216533 -217471321 + (TG)n Simple_repeat Simple_repeat 1 42 0 26 0 0 0 chr2 33216545 33216571 -217471283 + AT_rich Low_complexity Low_complexity 1 26 0 2326 86 7 0 chr2 33216652 33216944 -217470910 + AluY SINE Alu 1 294 -17 193 333 124 0 chr2 33217071 33217176 -217470678 + L2 LINE L2 3153 3270 -2 * 364 244 178 0 chr2 33217175 33217310 -217470544 - MIR SINE MIR -1 261 103 515 116 53 53 chr2 33217323 33217418 -217470436 + LTR47A LTR ERVL 1 95 -357 310 205 86 43 chr2 33217586 33217703 -217470151 - L1MC4 LINE L1 -5 8037 7916 1498 56 0 0 chr2 33217785 33217963 -217469891 - AluY SINE Alu -7 304 127 234 347 129 27 chr2 33268018 33268271 -217419583 + L2 LINE L2 2778 3059 -254 201 189 0 38 chr2 33268310 33268363 -217419491 + (CA)n Simple_repeat Simple_repeat 1 51 0 2393 57 3 17 chr2 33268489 33268786 -217419068 + AluY SINE Alu 1 293 -18 293 130 0 0 chr2 33269810 33269856 -217417998 + Alu SINE Alu 254 299 -2 2170 111 7 0 chr2 33270858 33271155 -217416699 - AluYa5 SINE Alu -12 299 1 1062 195 180 45 chr2 33271266 33271533 -217416321 - AluSq SINE Alu 0 303 1 978 212 12 0 chr2 33271984 33272149 -217415705 + FAM SINE Alu 1 167 -8 1197 97 0 7 chr2 33272427 33272581 -217415273 - AluSp SINE Alu -20 293 141 1949 145 108 44 chr2 33273109 33273177 -217414677 - Tigger2a DNA MER2_type -2275 433 371 1348 148 183 15 chr2 33273177 33273440 -217414414 - AluJb SINE Alu -5 307 1 1949 145 108 44 chr2 33273440 33273778 -217414076 - Tigger2a DNA MER2_type -2337 371 1 2132 121 3 0 chr2 33273781 33274070 -217413784 - AluSp SINE Alu -23 290 1 2490 63 0 3 chr2 33274505 33274808 -217413046 + AluY SINE Alu 1 302 -9 349 283 72 20 chr2 33274988 33275140 -217412714 - L1ME4a LINE L1 -234 5887 5728 366 138 0 0 chr2 33275778 33275843 -217412011 - L1PB3 LINE L1 -4 6150 6086 1750 159 3 14 chr2 33277536 33277826 -217410028 + AluSx SINE Alu 1 287 -25 288 0 0 0 chr2 33277826 33277858 -217409996 + (CATA)n Simple_repeat Simple_repeat 2 33 0 358 131 50 0 chr2 33278002 33278101 -217409753 + (TA)n Simple_repeat Simple_repeat 2 105 0 1527 179 3 34 chr2 33278458 33278749 -217409105 + AluJo SINE Alu 31 312 0 2287 83 3 13 chr2 33278978 33279280 -217408574 - AluSx SINE Alu -13 299 1 282 335 64 65 chr2 33279358 33279640 -217408214 - L2 LINE L2 -256 3016 2730 23 0 0 0 chr2 33280345 33280368 -217407486 + AT_rich Low_complexity Low_complexity 1 23 0 283 172 57 98 chr2 33280517 33280639 -217407215 + MER113 DNA MER1_type? 80 196 -325 320 280 69 40 chr2 33280690 33280865 -217406989 + L1MC/D LINE L1 5641 5820 -1988 2139 115 13 0 chr2 33280877 33281181 -217406673 - AluSx SINE Alu -4 308 1 679 134 0 59 chr2 33281249 33281368 -217406486 + AluJb SINE Alu 1 112 -200 1857 127 36 7 chr2 33281504 33281808 -217406046 + AluSx SINE Alu 1 312 0 1953 138 3 7 chr2 33282757 33283054 -217404800 - AluSx SINE Alu -16 296 1 766 161 0 8 chr2 33283113 33283231 -217404623 + FLAM_C SINE Alu 1 117 -26 35 0 0 0 chr2 33283235 33283270 -217404584 + AT_rich Low_complexity Low_complexity 1 35 0 2002 143 0 10 chr2 33283270 33283577 -217404277 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr2 33283646 33283669 -217404185 + AT_rich Low_complexity Low_complexity 1 23 0 2292 112 0 0 chr2 33284399 33284702 -217403152 - AluSx SINE Alu -9 303 1 25 51 0 0 chr2 33285269 33285308 -217402546 + AT_rich Low_complexity Low_complexity 1 39 0 1703 166 48 0 chr2 33285446 33285741 -217402113 - AluJb SINE Alu -3 309 1 259 389 22 14 chr2 33285855 33285994 -217401860 - MIR3 SINE MIR -35 173 34 2164 124 0 0 chr2 33286129 33286419 -217401435 + AluSg SINE Alu 1 290 -20 1919 151 41 0 chr2 33286478 33286769 -217401085 + AluSg SINE Alu 1 303 -7 2125 99 24 7 chr2 33287100 33287392 -217400462 + AluSq SINE Alu 1 297 -16 2293 103 3 0 chr2 33291615 33291917 -217395937 - AluSp SINE Alu -10 303 1 1553 202 0 18 chr2 33293437 33293719 -217394135 + AluJb SINE Alu 6 282 -30 360 64 0 0 chr2 33293721 33293768 -217394086 + (TGGA)n Simple_repeat Simple_repeat 3 49 0 26 82 0 0 chr2 33293992 33294053 -217393801 + AT_rich Low_complexity Low_complexity 1 61 0 34 24 0 0 chr2 33295014 33295055 -217392799 + AT_rich Low_complexity Low_complexity 1 41 0 2154 90 45 0 chr2 33295224 33295512 -217392342 + AluSg SINE Alu 1 301 -9 341 171 341 0 chr2 33295556 33295644 -217392210 - MLT1F1 LTR MaLR -384 183 66 311 312 86 9 chr2 33296140 33296361 -217391493 - L1ME4a LINE L1 -255 5866 5629 482 165 25 0 chr2 33297161 33297240 -217390614 - AluJb SINE Alu -19 293 213 2145 119 3 0 chr2 33297776 33298069 -217389785 + AluSx SINE Alu 14 307 -5 2058 152 7 0 chr2 33298069 33298366 -217389488 + AluSx SINE Alu 1 299 -13 1926 140 7 0 chr2 33298380 33298666 -217389188 + AluSx SINE Alu 1 288 -24 1324 119 59 9 chr2 33299916 33300135 -217387719 + MER30 DNA MER1_type 1 230 0 2370 78 3 0 chr2 33300323 33300617 -217387237 + AluSp SINE Alu 2 296 -17 28 0 0 0 chr2 33300643 33300671 -217387183 + AT_rich Low_complexity Low_complexity 1 28 0 529 202 20 105 chr2 33300886 33301070 -217386784 + Charlie1 DNA MER1_type 2365 2524 -237 3647 137 45 9 chr2 33301070 33301743 -217386111 + L1MA5 LINE L1 5600 6296 -4 529 202 20 105 chr2 33301743 33301805 -217386049 + Charlie1 DNA MER1_type 2524 2590 -171 1752 126 3 35 chr2 33302486 33302771 -217385083 + AluSx SINE Alu 32 307 -5 24 0 0 0 chr2 33302860 33302884 -217384970 + AT_rich Low_complexity Low_complexity 1 24 0 185 62 0 31 chr2 33302889 33302921 -217384933 + (TA)n Simple_repeat Simple_repeat 1 31 0 209 293 37 0 chr2 33303132 33303214 -217384640 - MIR SINE MIR -54 208 124 781 142 4 147 chr2 33303745 33303902 -217383952 - L1PA15 LINE L1 0 6165 6048 1950 165 30 0 chr2 33303902 33304205 -217383649 - AluSx SINE Alu 0 312 1 781 142 4 147 chr2 33304205 33304272 -217383582 - L1PA15 LINE L1 -117 6048 5973 1989 132 20 7 chr2 33304604 33304908 -217382946 + AluSx SINE Alu 1 308 -4 2017 148 0 16 chr2 33305328 33305632 -217382222 + AluSx SINE Alu 1 299 -13 2244 106 0 10 chr2 33305746 33306049 -217381805 + AluSq SINE Alu 1 300 -13 1859 131 43 30 chr2 33306718 33307023 -217380831 + AluSq SINE Alu 1 309 -4 1110 173 71 5 chr2 33307122 33307319 -217380535 + AluJo SINE Alu 87 296 -16 262 94 0 38 chr2 33307396 33307449 -217380405 + (TTTCC)n Simple_repeat Simple_repeat 5 55 0 2139 87 4 7 chr2 33307462 33307738 -217380116 - AluSq SINE Alu -38 275 1 1872 154 0 13 chr2 33307900 33308206 -217379648 - AluSx SINE Alu -10 302 1 243 0 0 0 chr2 33308308 33308335 -217379519 + (TG)n Simple_repeat Simple_repeat 2 28 0 453 125 0 0 chr2 33308718 33308790 -217379064 + AluS SINE Alu 227 298 -12 1488 130 173 4 chr2 33309793 33310047 -217377807 - AluSg1 SINE Alu -12 297 1 993 79 0 0 chr2 33310131 33310257 -217377597 - AluY SINE Alu -15 296 171 50 65 0 0 chr2 33310292 33310384 -217377470 + AT_rich Low_complexity Low_complexity 1 92 0 1410 204 47 23 chr2 33310891 33311190 -217376664 - AluJo SINE Alu -6 306 1 785 213 91 15 chr2 33311564 33311827 -217376027 + L1MC5 LINE L1 7631 7913 -48 184 324 154 0 chr2 33312026 33312208 -217375646 + L2 LINE L2 2846 3055 -217 252 0 0 0 chr2 33312209 33312237 -217375617 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 703 165 0 0 chr2 33312265 33312374 -217375480 - AluSq SINE Alu -71 242 134 1521 128 0 77 chr2 33312375 33312675 -217375179 - AluSx SINE Alu 0 312 48 2077 135 0 13 chr2 33313568 33313871 -217373983 + AluSq SINE Alu 1 299 -14 1669 170 159 5 chr2 33313917 33314288 -217373566 - MSTA LTR MaLR 0 428 1 232 314 0 92 chr2 33314456 33314609 -217373245 + L2 LINE L2 3164 3302 -11 2108 96 0 7 chr2 33314645 33314955 -217372899 - AluSc SINE Alu 0 308 1 1922 150 0 10 chr2 33315314 33315608 -217372246 + AluSx SINE Alu 17 307 -5 1610 174 45 3 chr2 33315845 33316132 -217371722 + AluJb SINE Alu 1 299 -13 2203 90 7 3 chr2 33316144 33316433 -217371421 + AluSg SINE Alu 1 290 -20 344 245 29 20 chr2 33316554 33316656 -217371198 + L2 LINE L2 3208 3310 -3 25 0 0 0 chr2 33317237 33317262 -217370592 + AT_rich Low_complexity Low_complexity 1 25 0 1413 110 5 0 chr2 33318077 33318268 -217369586 + AluSq SINE Alu 1 192 -121 214 296 185 71 chr2 33319161 33319469 -217368385 - L2 LINE L2 -441 2873 2531 1902 155 7 0 chr2 33319761 33320051 -217367803 + AluJb SINE Alu 1 292 -20 329 199 171 55 chr2 33320063 33320209 -217367645 - L1ME LINE L1 -350 5771 5609 2401 76 0 0 chr2 33320561 33320852 -217367002 + AluSc SINE Alu 1 291 -18 250 346 65 19 chr2 33322255 33322362 -217365492 - L2 LINE L2 -24 3248 3137 2282 101 13 0 chr2 33322799 33323106 -217364748 - AluY SINE Alu 0 311 1 1101 110 0 30 chr2 33323180 33323344 -217364510 - AluSg/x SINE Alu -18 292 134 1936 118 22 0 chr2 33323344 33323614 -217364240 - AluSx SINE Alu -36 276 1 1580 211 73 45 chr2 33323783 33324248 -217363606 + L1ME1 LINE L1 5683 6160 -6 700 227 57 31 chr2 33324883 33325077 -217362777 + HAL1 LINE L1 574 772 -1735 2338 74 0 19 chr2 33325443 33325754 -217362100 - AluY SINE Alu -6 305 1 396 103 0 0 chr2 33326095 33326153 -217361701 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 1981 98 4 0 chr2 33326157 33326422 -217361432 - AluSx SINE Alu -46 266 1 395 245 16 125 chr2 33327622 33327756 -217360098 - MIR SINE MIR -34 228 119 2193 75 7 0 chr2 33327756 33328080 -217359774 - AluSx SINE Alu 0 328 3 395 245 16 125 chr2 33328080 33328136 -217359718 - MIR SINE MIR -143 119 58 2008 107 7 10 chr2 33328151 33328442 -217359412 - AluSq SINE Alu -23 290 1 2564 46 0 16 chr2 33328455 33328761 -217359093 - AluY SINE Alu -10 301 1 201 189 0 38 chr2 33328887 33328940 -217358914 + (TG)n Simple_repeat Simple_repeat 1 51 0 234 347 129 27 chr2 33328979 33329232 -217358622 - L2 LINE L2 -254 3059 2778 2227 112 3 0 chr2 33330044 33330349 -217357505 + AluSx SINE Alu 1 306 -6 24 32 0 0 chr2 33330796 33330827 -217357027 + AT_rich Low_complexity Low_complexity 1 31 0 2109 109 16 10 chr2 33330829 33331133 -217356721 - AluSx SINE Alu -6 306 1 829 123 14 41 chr2 33331185 33331331 -217356523 - FLAM_C SINE Alu -1 142 1 235 61 41 82 chr2 33331893 33331942 -217355912 + MER58 DNA MER1_type 68 114 -2306 255 114 209 0 chr2 33331943 33331997 -217355857 + MER58 DNA MER1_type 2357 2420 0 976 230 25 0 chr2 33332225 33332429 -217355425 + MER3 DNA MER1_type 1 209 0 1701 168 34 17 chr2 33332435 33332726 -217355128 - AluJo SINE Alu -16 296 1 24 32 0 0 chr2 33333053 33333084 -217354770 + AT_rich Low_complexity Low_complexity 1 31 0 1655 171 25 4 chr2 33333323 33333597 -217354257 - AluJb SINE Alu -18 294 15 2123 124 0 0 chr2 33333689 33333979 -217353875 - AluSx SINE Alu -22 290 1 2434 86 3 0 chr2 33334427 33334729 -217353125 + AluSg SINE Alu 1 303 -7 2368 87 3 0 chr2 33335236 33335535 -217352319 - AluSx SINE Alu -12 300 1 272 310 133 26 chr2 33335583 33335696 -217352158 - MIR SINE MIR -68 140 16 191 376 96 13 chr2 33335817 33335974 -217351880 - L2 LINE L2 -218 3054 2885 2261 109 0 3 chr2 33336342 33336653 -217351201 - AluSg SINE Alu 0 310 1 271 271 37 65 chr2 33336802 33336909 -217350945 + L2 LINE L2 2262 2365 -949 205 224 53 66 chr2 33337144 33337220 -217350634 + MIR3 SINE MIR 93 167 -41 2292 98 10 0 chr2 33337393 33337700 -217350154 - AluSx SINE Alu -2 310 1 279 306 52 91 chr2 33337755 33337863 -217349991 - MIR SINE MIR -3 259 148 2438 72 0 0 chr2 33337863 33338154 -217349700 - AluY SINE Alu -20 291 1 279 306 52 91 chr2 33338154 33338297 -217349557 - MIR SINE MIR -114 148 18 1964 135 20 7 chr2 33338745 33339049 -217348805 + AluSx SINE Alu 2 309 -3 2192 103 3 0 chr2 33339723 33340050 -217347804 + AluSx SINE Alu 1 328 0 1125 252 37 7 chr2 33340313 33340583 -217347271 - MER58 DNA MER1_type -63 278 1 1336 101 0 0 chr2 33340700 33340868 -217346986 - AluSp SINE Alu -12 301 134 2134 129 0 3 chr2 33340868 33341179 -217346675 - AluSx SINE Alu -2 310 1 2170 134 0 3 chr2 33341270 33341575 -217346279 - AluSx SINE Alu -8 304 1 185 0 40 0 chr2 33341671 33341696 -217346158 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1843 160 0 3 chr2 33341698 33341991 -217345863 - AluJb SINE Alu -20 292 1 1172 136 0 0 chr2 33341999 33342161 -217345693 - AluSg/x SINE Alu -19 293 132 2113 119 3 7 chr2 33342320 33342629 -217345225 - AluSx SINE Alu 0 308 1 2018 110 3 49 chr2 33342777 33342922 -217344932 + AluSx SINE Alu 3 128 -184 2222 125 0 3 chr2 33342922 33343225 -217344629 + AluSx SINE Alu 3 304 -8 2018 110 3 49 chr2 33343225 33343387 -217344467 + AluSx SINE Alu 128 296 -16 849 151 0 43 chr2 33343611 33343750 -217344104 - FLAM_A SINE Alu 0 133 1 306 206 0 0 chr2 33343820 33343888 -217343966 + CT-rich Low_complexity Low_complexity 1 68 0 695 202 0 0 chr2 33343888 33344012 -217343842 - FLAM_A SINE Alu -1 141 18 281 256 93 0 chr2 33344279 33344365 -217343489 + MIR SINE MIR 56 149 -113 1328 46 0 0 chr2 33344579 33344730 -217343124 - L1PA4 LINE L1 -8 6147 5997 2279 103 3 10 chr2 33344731 33345041 -217342813 - AluSx SINE Alu -4 308 1 2272 92 0 0 chr2 33345058 33345350 -217342504 - AluY SINE Alu -19 292 1 760 194 23 8 chr2 33345358 33345487 -217342367 - AluJo SINE Alu -176 136 6 2267 95 0 13 chr2 33345580 33345885 -217341969 - AluY SINE Alu -10 301 1 1062 195 180 45 chr2 33345996 33346263 -217341591 - AluSq SINE Alu 0 303 1 978 212 12 0 chr2 33346714 33346879 -217340975 + FAM SINE Alu 1 167 -8 2222 102 0 7 chr2 33347157 33347451 -217340403 - AluSq SINE Alu -20 293 2 664 230 7 22 chr2 33347463 33347598 -217340256 - FLAM_A SINE Alu 0 133 1 2059 133 3 7 chr2 33347753 33348062 -217339792 + AluJb SINE Alu 3 310 -2 2296 101 0 3 chr2 33348568 33348866 -217338988 - AluSg SINE Alu -13 297 1 204 40 0 0 chr2 33349372 33349397 -217338457 + (T)n Simple_repeat Simple_repeat 1 25 0 201 328 0 17 chr2 33350117 33350175 -217337679 - MIR SINE MIR -186 76 20 2185 88 11 0 chr2 33350382 33350666 -217337188 - AluSp SINE Alu -25 288 2 334 239 11 23 chr2 33351015 33351103 -217336751 + MER2 DNA MER2_type 2 88 -257 2201 101 3 0 chr2 33351114 33351400 -217336454 + AluSg SINE Alu 1 287 -23 186 71 0 0 chr2 33351409 33351437 -217336417 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 2266 114 3 0 chr2 33352342 33352640 -217335214 + AluSx SINE Alu 8 306 -6 22 0 0 0 chr2 33352891 33352913 -217334941 + AT_rich Low_complexity Low_complexity 1 22 0 227 234 182 13 chr2 33353100 33353177 -217334677 - MIR3 SINE MIR -28 180 91 209 293 61 20 chr2 33353277 33353376 -217334478 - MIR SINE MIR -1 261 159 383 200 50 32 chr2 33353418 33353564 -217334290 - L1MA10 LINE L1 -6 6306 6166 1506 156 6 86 chr2 33353564 33353720 -217334134 - AluJo SINE Alu -23 289 122 2209 121 0 0 chr2 33353720 33354018 -217333836 - AluSx SINE Alu -14 298 1 1907 150 3 14 chr2 33354018 33354312 -217333542 - AluSg SINE Alu -19 291 1 1506 156 6 86 chr2 33354312 33354468 -217333386 - AluJo SINE Alu -188 124 1 282 116 0 0 chr2 33354755 33354798 -217333056 - Alu SINE Alu -4 304 262 1047 198 19 10 chr2 33354865 33355072 -217332782 - MER3 DNA MER1_type 0 209 1 448 340 180 10 chr2 33355195 33355589 -217332265 - L2 LINE L2 -5 3267 2807 219 353 0 0 chr2 33355671 33355739 -217332115 - L2 LINE L2 -49 3223 3156 1981 102 0 0 chr2 33356005 33356261 -217331593 - AluY SINE Alu -9 302 47 1697 63 5 0 chr2 33356372 33356577 -217331277 - AluY SINE Alu -8 303 98 2067 113 7 7 chr2 33356858 33357150 -217330704 - AluSq SINE Alu -21 292 1 1452 202 54 0 chr2 33357160 33357437 -217330417 - AluJo SINE Alu -20 292 1 1634 201 3 3 chr2 33357989 33358287 -217329567 - AluJo SINE Alu -14 298 1 21 0 0 0 chr2 33358378 33358399 -217329455 + AT_rich Low_complexity Low_complexity 1 21 0 6412 58 26 6 chr2 33358555 33359371 -217328483 - L1PA7 LINE L1 0 6469 5638 2168 27 58 0 chr2 33359364 33359624 -217328230 + L1PA7 LINE L1 5737 6011 -143 * 17569 78 4 4 chr2 33359624 33361987 -217325867 - L1PA7 LINE L1 -822 5639 3278 4780 98 22 0 chr2 33361985 33362652 -217325202 - L1PA7 LINE L1 -5779 682 1 * 438 75 0 0 chr2 33362655 33362722 -217325132 + (TATG)n Simple_repeat Simple_repeat 2 68 0 2153 104 0 0 chr2 33362725 33363005 -217324849 - AluSg SINE Alu -30 280 1 2202 90 0 45 chr2 33363858 33364169 -217323685 - AluSx SINE Alu -15 297 1 2025 113 7 0 chr2 33364638 33364913 -217322941 + AluSc SINE Alu 4 280 -29 216 0 0 0 chr2 33364916 33364940 -217322914 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 330 304 15 44 chr2 33365228 33365363 -217322491 + MIR SINE MIR 34 164 -98 284 262 56 71 chr2 33365433 33365559 -217322295 + MIR SINE MIR 28 151 -111 2396 86 3 0 chr2 33366437 33366738 -217321116 - AluSx SINE Alu -10 302 1 2045 133 0 29 chr2 33366794 33366929 -217320925 + AluSq SINE Alu 1 138 -175 2452 73 10 19 chr2 33366929 33367243 -217320611 + AluY SINE Alu 1 311 0 2045 133 0 29 chr2 33367243 33367423 -217320431 + AluSq SINE Alu 138 307 -6 498 159 0 0 chr2 33367529 33367617 -217320237 + CT-rich Low_complexity Low_complexity 1 88 0 654 150 0 40 chr2 33367618 33367718 -217320136 - FLAM_C SINE Alu -21 122 27 23 0 0 0 chr2 33367797 33367820 -217320034 + AT_rich Low_complexity Low_complexity 1 23 0 2479 77 0 0 chr2 33367820 33368131 -217319723 + AluY SINE Alu 1 311 0 944 128 7 7 chr2 33368173 33368314 -217319540 - AluJb SINE Alu -171 141 1 2279 109 6 3 chr2 33368625 33368936 -217318918 + AluSx SINE Alu 1 312 0 32 26 0 0 chr2 33368949 33368988 -217318866 + AT_rich Low_complexity Low_complexity 1 39 0 1383 111 5 0 chr2 33369010 33369200 -217318654 - AluSx SINE Alu -121 191 1 419 229 150 0 chr2 33369275 33369415 -217318439 - L1ME1 LINE L1 -6 6160 6000 528 130 150 0 chr2 33369424 33369524 -217318330 - L1ME1 LINE L1 -207 5957 5843 312 247 56 11 chr2 33369539 33369628 -217318226 - L1ME1 LINE L1 -601 5758 5666 2346 112 0 3 chr2 33369628 33369941 -217317913 - AluSx SINE Alu 0 312 1 1518 224 36 17 chr2 33369941 33370361 -217317493 - L1ME1 LINE L1 -813 5333 4906 642 138 11 0 chr2 33370369 33370463 -217317391 - FLAM_C SINE Alu -16 127 33 1021 202 99 11 chr2 33370470 33370732 -217317122 - L1ME1 LINE L1 -1233 4913 4629 294 364 39 26 chr2 33370838 33371069 -217316785 + MIR SINE MIR 29 262 0 2118 237 50 42 chr2 33371855 33372248 -217315606 - L1MC4 LINE L1 -157 7885 7497 2241 103 0 7 chr2 33372248 33372549 -217315305 - AluSq SINE Alu -14 299 1 2118 237 50 42 chr2 33372549 33372735 -217315119 - L1MC4 LINE L1 -545 7497 7298 1973 115 40 0 chr2 33372735 33373013 -217314841 + AluSx SINE Alu 1 289 -23 2118 237 50 42 chr2 33373013 33373068 -217314786 - L1MC4 LINE L1 -744 7298 7245 2444 87 0 0 chr2 33373174 33373473 -217314381 - AluSx SINE Alu -13 299 1 2276 90 0 13 chr2 33373684 33373984 -217313870 - AluY SINE Alu -15 296 1 342 320 127 18 chr2 33374063 33374291 -217313563 - MIR SINE MIR -3 259 7 2394 110 0 0 chr2 33374805 33375114 -217312740 - AluSq SINE Alu -4 309 1 22 35 0 0 chr2 33375405 33375434 -217312420 + AT_rich Low_complexity Low_complexity 1 29 0 2123 129 0 6 chr2 33375500 33375811 -217312043 - AluSg1 SINE Alu 0 309 1 21 0 0 0 chr2 33376070 33376091 -217311763 + AT_rich Low_complexity Low_complexity 1 21 0 712 260 82 46 chr2 33376120 33376473 -217311381 - L1ME3A LINE L1 -211 5951 5585 2268 89 0 20 chr2 33376473 33376775 -217311079 - AluSc SINE Alu -13 296 1 712 260 82 46 chr2 33376775 33376867 -217310987 - L1ME3A LINE L1 -577 5585 5498 1790 157 17 7 chr2 33377003 33377302 -217310552 + AluJb SINE Alu 7 308 -4 197 83 28 0 chr2 33377418 33377454 -217310400 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 2406 72 0 0 chr2 33377456 33377749 -217310105 - AluY SINE Alu -18 293 1 290 346 90 25 chr2 33378160 33378515 -217309339 - L2 LINE L2 -1259 2055 1678 1799 134 40 7 chr2 33378733 33379041 -217308813 + AluSx SINE Alu 1 317 0 578 295 142 11 chr2 33379322 33379603 -217308251 - L2 LINE L2 0 3313 2996 181 315 79 11 chr2 33380261 33380350 -217307504 + L3 LINE CR1 587 681 -896 1783 156 65 26 chr2 33380517 33380869 -217306985 + MER47A DNA MER2_type 1 366 0 24 0 0 0 chr2 33380969 33380993 -217306861 + AT_rich Low_complexity Low_complexity 1 24 0 444 82 0 0 chr2 33380993 33381054 -217306800 + (TG)n Simple_repeat Simple_repeat 2 62 0 2186 96 3 48 chr2 33381691 33381870 -217305984 - AluSq SINE Alu -13 300 139 2418 78 0 10 chr2 33381870 33382177 -217305677 - AluY SINE Alu -7 304 1 2186 96 3 48 chr2 33382177 33382311 -217305543 - AluSq SINE Alu -174 139 1 1974 123 0 14 chr2 33382896 33383180 -217304674 + AluSg SINE Alu 1 280 -30 1931 4 0 0 chr2 33383195 33383423 -217304431 - L1PA2 LINE L1 -249 5906 5679 230 51 77 0 chr2 33383410 33383449 -217304405 + L1PA3 LINE L1 6110 6151 -4 * 350 299 56 30 chr2 33383819 33384016 -217303838 + L1MDa LINE L1 1401 1702 -4724 2236 109 3 6 chr2 33384039 33384352 -217303502 - AluSx SINE Alu 0 312 1 2297 206 94 26 chr2 33384534 33385364 -217302490 + L1M4 LINE L1 3763 4648 -1498 429 245 16 78 chr2 33385373 33385393 -217302461 + L1ME1 LINE L1 138 158 -6047 1702 179 21 3 chr2 33385393 33385683 -217302171 - AluSx SINE Alu -17 295 1 429 245 16 78 chr2 33385683 33385854 -217302000 + L1ME1 LINE L1 158 317 -5888 2122 138 3 10 chr2 33385854 33386166 -217301688 - AluSx SINE Alu -2 310 1 1715 267 50 9 chr2 33386222 33387079 -217300775 + L1ME1 LINE L1 1967 2827 -3388 334 266 47 16 chr2 33387158 33387286 -217300568 + L1ME1 LINE L1 2857 2988 -3227 2458 202 132 11 chr2 33387363 33388299 -217299555 + L1ME1 LINE L1 5126 6169 -66 302 45 23 0 chr2 33389004 33389048 -217298806 + L1MC4 LINE L1 7935 7979 -63 529 191 118 33 chr2 33389048 33389200 -217298654 + MER6B DNA MER2_type 1 165 -45 207 340 48 48 chr2 33389520 33389623 -217298231 - L2 LINE L2 -189 3083 2981 2270 92 17 0 chr2 33390328 33390621 -217297233 - AluSx SINE Alu -14 298 1 31 26 0 0 chr2 33390712 33390750 -217297104 + AT_rich Low_complexity Low_complexity 1 38 0 892 129 8 0 chr2 33391071 33391203 -217296651 - FLAM_C SINE Alu 0 133 1 1392 129 52 8 chr2 33391359 33391607 -217296247 + L1MB2 LINE L1 5906 6164 -7 567 241 51 110 chr2 33391612 33391716 -217296138 + L1M4 LINE L1 4364 4473 -1673 2164 125 0 14 chr2 33391716 33392013 -217295841 + AluSx SINE Alu 5 297 -15 567 241 51 110 chr2 33392013 33392282 -217295572 + L1M4 LINE L1 4473 4715 -1431 893 217 0 6 chr2 33392322 33392497 -217295357 + MER5A DNA MER1_type 1 174 -15 575 248 96 23 chr2 33392500 33392802 -217295052 + L1M4 LINE L1 4753 5076 -1070 256 180 0 66 chr2 33392896 33392957 -217294897 + MIR SINE MIR 201 257 -5 802 153 15 22 chr2 33393445 33393582 -217294272 + AluJb SINE Alu 1 136 -176 1740 182 0 19 chr2 33393693 33394001 -217293853 - AluJo SINE Alu -10 302 1 1585 132 30 0 chr2 33394058 33394323 -217293531 - L1MB3 LINE L1 -19 6164 5892 2110 122 0 34 chr2 33394324 33394461 -217293393 + AluSq SINE Alu 1 141 -172 2441 97 0 0 chr2 33394461 33394771 -217293083 + AluSg SINE Alu 1 310 0 2110 122 0 34 chr2 33394771 33394953 -217292901 + AluSq SINE Alu 141 309 -4 1370 106 0 6 chr2 33394982 33395162 -217292692 + AluSg/x SINE Alu 120 298 -14 1049 190 93 28 chr2 33395165 33395283 -217292571 - L1MB3 LINE L1 -280 5903 5794 2046 119 0 20 chr2 33395283 33395616 -217292238 - AluSx SINE Alu 0 312 1 1049 190 93 28 chr2 33395616 33395786 -217292068 - L1MB3 LINE L1 -389 5794 5596 1902 148 27 3 chr2 33395943 33396240 -217291614 + AluJb SINE Alu 5 308 -4 199 343 56 19 chr2 33396661 33396769 -217291085 - MIR SINE MIR -112 150 39 1682 154 11 4 chr2 33396780 33397040 -217290814 - AluSx SINE Alu -16 296 35 1604 179 25 18 chr2 33397167 33397452 -217290402 - AluJo SINE Alu -25 287 1 207 0 0 0 chr2 33397458 33397481 -217290373 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2540 40 0 3 chr2 33397505 33397802 -217290052 - AluY SINE Alu -15 296 1 288 304 54 0 chr2 33398261 33398353 -217289501 - L2 LINE L2 -246 3067 2971 397 175 109 36 chr2 33399222 33399357 -217288497 - MIR SINE MIR -54 208 60 2112 116 7 7 chr2 33399569 33399862 -217287992 - AluSq SINE Alu -20 293 1 381 294 0 20 chr2 33400116 33400218 -217287636 + L2 LINE L2 3190 3289 -24 361 252 57 16 chr2 33400458 33400581 -217287273 + MIR3 SINE MIR 33 160 -48 297 242 0 0 chr2 33400602 33400664 -217287190 - Charlie8 DNA MER1_type -990 1427 1366 286 222 0 32 chr2 33400766 33400829 -217287025 - MER5B DNA MER1_type -1 177 117 1391 154 0 26 chr2 33400829 33401063 -217286791 + AluJo SINE Alu 85 312 0 188 194 0 0 chr2 33401125 33401156 -217286698 - MER5B DNA MER1_type -131 47 17 497 284 52 0 chr2 33402065 33402199 -217285655 + MIR SINE MIR 17 157 -105 2227 84 7 0 chr2 33402209 33402493 -217285361 + AluSq SINE Alu 1 286 -27 1426 232 33 25 chr2 33402830 33403192 -217284662 - MLT1A1 LTR MaLR 0 365 1 2099 141 0 3 chr2 33403206 33403510 -217284344 - AluSx SINE Alu -9 303 1 365 197 0 0 chr2 33403519 33403595 -217284259 - L1MC4 LINE L1 0 8042 7967 1453 223 49 25 chr2 33403598 33404019 -217283835 - L1MC4 LINE L1 -166 7657 7198 2030 175 75 10 chr2 33404019 33404419 -217283435 + MSTB LTR MaLR 1 426 0 1453 223 49 25 chr2 33404419 33404483 -217283371 - L1MC4 LINE L1 -625 7198 7137 22 0 0 0 chr2 33404496 33404518 -217283336 + AT_rich Low_complexity Low_complexity 1 22 0 1378 197 14 24 chr2 33404577 33404866 -217282988 - AluJo SINE Alu -16 296 11 656 204 27 18 chr2 33404870 33405091 -217282763 - L1MC4 LINE L1 -820 7222 7000 2331 112 7 0 chr2 33405100 33405405 -217282449 - AluSx SINE Alu -5 307 1 547 239 128 83 chr2 33405538 33405593 -217282261 + MLT1J LTR MaLR 3 54 -457 2280 89 7 3 chr2 33405593 33405885 -217281969 - AluSx SINE Alu -19 293 1 547 239 128 83 chr2 33405885 33406118 -217281736 + MLT1J LTR MaLR 54 304 -207 1570 182 156 12 chr2 33406168 33406514 -217281340 - MSTD LTR MaLR 0 396 1 1558 163 19 49 chr2 33406760 33407085 -217280769 + L1MD3 LINE L1 6663 6977 -1018 2184 134 21 100 chr2 33407088 33407327 -217280527 + Tigger2a DNA MER2_type 1 257 -2451 2253 116 7 7 chr2 33407327 33407630 -217280224 - AluSg SINE Alu -7 303 1 2184 134 21 100 chr2 33407630 33407678 -217280176 + Tigger2a DNA MER2_type 257 307 -2401 1052 98 144 17 chr2 33407678 33407701 -217280153 - MER107 DNA MER1_type -1 196 177 217 0 61 0 chr2 33407701 33407734 -217280120 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1052 98 144 17 chr2 33407734 33407884 -217279970 - MER107 DNA MER1_type -20 177 1 2184 134 21 100 chr2 33407884 33408066 -217279788 + Tigger2a DNA MER2_type 307 434 0 582 137 0 98 chr2 33408066 33408219 -217279635 + L1MC3 LINE L1 6964 7101 -684 341 211 66 0 chr2 33408225 33408301 -217279553 + MLT1F1 LTR MaLR 45 125 -442 426 216 10 0 chr2 33408301 33408398 -217279456 + L1MD3 LINE L1 7404 7501 -494 961 94 0 7 chr2 33408398 33408536 -217279318 - Tigger4(Zombi) DNA MER2_type 0 2731 2595 1157 177 26 17 chr2 33409030 33409262 -217278592 - AluSg/x SINE Alu -6 306 73 2241 113 3 3 chr2 33409450 33409751 -217278103 - AluSx SINE Alu -11 301 1 2215 127 0 10 chr2 33409854 33410168 -217277686 + AluSx SINE Alu 1 311 -1 2295 104 3 0 chr2 33410680 33410977 -217276877 + AluSx SINE Alu 1 298 -14 223 318 48 40 chr2 33410992 33411118 -217276736 - MIR3 SINE MIR -25 183 57 1608 182 43 10 chr2 33411567 33411869 -217275985 - AluJb SINE Alu 0 312 1 1397 184 131 28 chr2 33411922 33412281 -217275573 + MSTD LTR MaLR 1 396 0 5607 115 25 3 chr2 33412785 33413186 -217274668 - L1PA15 LINE L1 -2 6163 5772 2372 85 0 0 chr2 33413186 33413480 -217274374 - AluY SINE Alu -17 294 1 5607 115 25 3 chr2 33413480 33414541 -217273313 - L1PA15 LINE L1 -393 5772 4708 305 338 58 47 chr2 33415111 33415389 -217272465 - L1ME4a LINE L1 -137 5984 5704 228 258 26 58 chr2 33415476 33415631 -217272223 - HAL1 LINE L1 -133 2374 2225 1756 200 0 7 chr2 33415716 33416016 -217271838 - AluJo SINE Alu -14 298 1 1403 178 120 11 chr2 33416020 33416296 -217271558 - AluSx SINE Alu -6 306 1 322 251 60 42 chr2 33416650 33416865 -217270989 - HAL1 LINE L1 -877 1630 1412 669 226 154 24 chr2 33416880 33417088 -217270766 + MIR SINE MIR 22 256 -6 492 299 56 34 chr2 33417413 33417681 -217270173 - HAL1 LINE L1 -1409 1098 825 284 212 59 12 chr2 33419122 33419207 -217268647 - L1 LINE L1 -1246 4900 4812 183 261 261 72 chr2 33419260 33419371 -217268483 + L2 LINE L2 3182 3313 0 509 271 43 7 chr2 33420283 33420461 -217267393 - MLT1K LTR MaLR -5 610 419 1412 203 64 37 chr2 33420643 33420939 -217266915 - AluJo SINE Alu -7 305 2 401 281 129 22 chr2 33420939 33421070 -217266784 + MIR SINE MIR 114 262 0 196 276 52 0 chr2 33421066 33421124 -217266730 - MIR SINE MIR -108 154 94 * 544 252 116 13 chr2 33421496 33421651 -217266203 - MIR SINE MIR -89 173 3 649 163 15 0 chr2 33422712 33422847 -217265007 + CT-rich Low_complexity Low_complexity 3 139 0 761 188 12 59 chr2 33422848 33423018 -217264836 - AluJo SINE Alu -38 274 113 3585 170 79 76 chr2 33423250 33423832 -217264022 + Charlie1a DNA MER1_type 1 579 -2182 2190 121 48 25 chr2 33423832 33424188 -217263666 - THE1B LTR MaLR 0 364 1 12041 83 3 4 chr2 33424188 33425770 -217262084 - THE1B-int LTR MaLR 0 1580 1 2274 106 48 31 chr2 33425770 33426128 -217261726 - THE1B LTR MaLR 0 364 1 3585 170 79 76 chr2 33426128 33426759 -217261095 + Charlie1a DNA MER1_type 579 1245 -1516 180 0 0 0 chr2 33426759 33426779 -217261075 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 3585 170 79 76 chr2 33426779 33426990 -217260864 + Charlie1a DNA MER1_type 1245 1454 -1 2449 56 7 3 chr2 33427060 33427363 -217260491 - AluY SINE Alu -7 304 1 201 280 13 40 chr2 33427709 33427784 -217260070 + MIR SINE MIR 79 151 -57 219 69 0 0 chr2 33428019 33428048 -217259806 + (CA)n Simple_repeat Simple_repeat 2 30 0 2348 98 7 0 chr2 33429637 33429944 -217257910 - AluSx SINE Alu -3 309 1 2048 116 48 0 chr2 33430107 33430401 -217257453 - AluSg SINE Alu -2 308 1 1532 167 4 15 chr2 33430403 33430672 -217257182 - AluJb SINE Alu -17 295 30 25 31 0 0 chr2 33431634 33431666 -217256188 + AT_rich Low_complexity Low_complexity 1 32 0 358 200 200 0 chr2 33431727 33431832 -217256022 - L1MC4 LINE L1 -157 7885 7760 21 0 0 0 chr2 33433137 33433158 -217254696 + AT_rich Low_complexity Low_complexity 1 21 0 904 214 0 12 chr2 33433222 33433395 -217254459 - FAM SINE Alu -4 171 1 23 33 0 0 chr2 33433399 33433429 -217254425 + AT_rich Low_complexity Low_complexity 1 30 0 228 372 122 6 chr2 33433652 33433816 -217254038 - MIR3 SINE MIR -14 194 12 333 294 140 14 chr2 33433844 33433987 -217253867 - MIR SINE MIR 0 262 102 328 256 139 54 chr2 33434671 33434800 -217253054 + MIR3 SINE MIR 57 196 -12 21 0 0 0 chr2 33435131 33435152 -217252702 + AT_rich Low_complexity Low_complexity 1 21 0 1715 182 3 46 chr2 33436743 33437045 -217250809 + AluJb SINE Alu 1 289 -23 267 285 122 32 chr2 33437050 33437173 -217250681 - MIR3 SINE MIR -5 203 70 592 280 98 14 chr2 33437189 33437403 -217250451 + MIR SINE MIR 3 234 -28 2010 236 26 21 chr2 33437436 33438005 -217249849 + HsTC2 DNA Tc2 13 584 -1314 266 197 158 0 chr2 33438014 33438090 -217249764 + HsTC2 DNA Tc2 1811 1898 0 24 32 0 0 chr2 33438359 33438390 -217249464 + AT_rich Low_complexity Low_complexity 1 31 0 2243 95 0 0 chr2 33439658 33439977 -217247877 - AluSq SINE Alu 0 319 1 394 306 118 85 chr2 33440137 33440384 -217247470 + L2 LINE L2 2920 3182 -90 2090 101 16 36 chr2 33440384 33440692 -217247162 + AluSc SINE Alu 1 302 -7 394 306 118 85 chr2 33440692 33440784 -217247070 + L2 LINE L2 3182 3270 -2 22 0 0 0 chr2 33441073 33441095 -217246759 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 33441919 33441940 -217245914 + AT_rich Low_complexity Low_complexity 1 21 0 2172 102 6 26 chr2 33443791 33444104 -217243750 + AluSg SINE Alu 1 307 -3 417 213 97 39 chr2 33444181 33444336 -217243518 - MLT1K LTR MaLR -7 581 418 440 288 42 54 chr2 33444618 33444858 -217242996 + Charlie8 DNA MER1_type 3 239 -2178 2295 114 0 3 chr2 33445302 33445608 -217242246 + AluSq SINE Alu 1 305 -8 1893 161 58 6 chr2 33446293 33446640 -217241214 - MER47A DNA MER2_type 0 366 2 2505 213 60 5 chr2 33446840 33447699 -217240155 - L1M4 LINE L1 -2792 3852 2886 2346 96 0 0 chr2 33447709 33448010 -217239844 - AluSx SINE Alu -11 301 1 609 160 34 0 chr2 33448042 33448161 -217239693 - L1M4 LINE L1 -5346 1196 1074 1876 253 41 20 chr2 33448161 33448671 -217239183 - L1M4 LINE L1 -6012 530 10 245 367 19 19 chr2 33448699 33448857 -217238997 + MIR SINE MIR 48 205 -57 1988 288 32 14 chr2 33448969 33449563 -217238291 - MLT2E LTR ERVL -23 605 1 501 284 7 0 chr2 33450139 33450280 -217237574 - ERVL LTR ERVL -3223 2541 2400 474 65 0 0 chr2 33450281 33450343 -217237511 + (CA)n Simple_repeat Simple_repeat 1 62 0 735 326 67 54 chr2 33450691 33451671 -217236183 - ERVL LTR ERVL -3799 1965 973 270 233 0 0 chr2 33451873 33451933 -217235921 + L1MEc LINE L1 38 97 -6299 661 276 128 42 chr2 33451935 33452341 -217235513 - MLT1H1 LTR MaLR -1 554 114 301 267 40 0 chr2 33452350 33452451 -217235403 + L1MEc LINE L1 2058 2162 -4234 1964 126 10 39 chr2 33452452 33452762 -217235092 - AluSx SINE Alu -4 308 8 2246 91 6 31 chr2 33452806 33453125 -217234729 + AluSx SINE Alu 1 311 -1 10548 45 3 78 chr2 33453167 33454664 -217233190 - SVA Other Other -1 1385 1 893 177 0 6 chr2 33456475 33456633 -217231221 + Tigger1 DNA MER2_type 2 158 -2260 * 1078 109 86 52 chr2 33456621 33456714 -217231140 + Tigger1 DNA MER2_type 2202 2290 -128 2206 100 0 29 chr2 33456714 33457023 -217230831 - AluSq SINE Alu -12 301 2 1078 109 86 52 chr2 33457023 33457139 -217230715 + Tigger1 DNA MER2_type 2290 2418 0 231 333 0 0 chr2 33458324 33458390 -217229464 - MIR SINE MIR -2 260 195 211 326 0 0 chr2 33458381 33458424 -217229430 - MIR SINE MIR -197 65 23 * 377 88 73 0 chr2 33458431 33458499 -217229355 - L1MB2 LINE L1 0 6171 6099 834 160 46 0 chr2 33458499 33458630 -217229224 + FLAM_C SINE Alu 2 138 -5 2387 110 14 60 chr2 33458640 33459086 -217228768 - L1MB2 LINE L1 -61 6110 5686 967 173 14 24 chr2 33459365 33459573 -217228281 + MER20 DNA MER1_type 13 218 -1 1871 235 193 17 chr2 33459858 33460871 -217226983 + L2 LINE L2 2017 3213 -100 206 368 69 74 chr2 33460944 33461299 -217226555 - L2 LINE L2 -9 3263 2909 468 0 0 0 chr2 33461299 33461351 -217226503 + (TG)n Simple_repeat Simple_repeat 2 53 0 206 368 69 74 chr2 33461351 33461416 -217226438 - L2 LINE L2 -363 2909 2845 2410 78 0 34 chr2 33461642 33461962 -217225892 - AluSg SINE Alu -1 309 1 13699 125 19 25 chr2 33463261 33465184 -217222670 - Tigger1 DNA MER2_type 0 2418 508 792 199 0 0 chr2 33465184 33465360 -217222494 - L1MA6 LINE L1 -1 6299 6124 13699 125 19 25 chr2 33465360 33465759 -217222095 - Tigger1 DNA MER2_type -1910 508 108 1853 180 0 0 chr2 33465802 33466108 -217221746 - AluJb SINE Alu -6 306 1 316 179 73 24 chr2 33466114 33466237 -217221617 - L1MC5 LINE L1 -184 7777 7649 1314 208 51 10 chr2 33466240 33466466 -217221388 - MER114 LTR ERV -243 405 155 2816 16 0 6 chr2 33466466 33466783 -217221071 - AluYb8 SINE Alu -3 315 1 1314 208 51 10 chr2 33466783 33466945 -217220909 - MER114 LTR ERV -493 155 1 23 92 0 0 chr2 33467238 33467303 -217220551 + AT_rich Low_complexity Low_complexity 1 65 0 225 271 0 0 chr2 33467414 33467473 -217220381 - MER94 DNA DNA -72 62 4 266 300 166 50 chr2 33467963 33468699 -217219155 - L2 LINE L2 -961 2353 1533 690 287 100 13 chr2 33469208 33469438 -217218416 - MIR SINE MIR 0 262 13 262 278 153 49 chr2 33470167 33470311 -217217543 + MIR SINE MIR 94 252 -10 24 0 0 0 chr2 33471201 33471225 -217216629 + AT_rich Low_complexity Low_complexity 1 24 0 188 225 213 38 chr2 33471290 33471370 -217216484 + MIR3 SINE MIR 83 176 -32 1779 185 11 19 chr2 33471419 33471787 -217216067 + MER47A DNA MER2_type 1 365 -1 311 256 136 8 chr2 33471895 33472020 -217215834 - MIR3 SINE MIR -32 176 36 23 0 0 0 chr2 33472093 33472116 -217215738 + AT_rich Low_complexity Low_complexity 1 23 0 296 287 213 30 chr2 33472571 33472773 -217215081 + MIR SINE MIR 21 259 -3 639 182 67 125 chr2 33472943 33473200 -217214654 + MER33 DNA MER1_type 15 250 -2335 1912 143 24 0 chr2 33473200 33473487 -217214367 - AluSx SINE Alu -8 304 11 639 182 67 125 chr2 33473487 33473558 -217214296 + MER33 DNA MER1_type 250 324 0 21 0 0 0 chr2 33474065 33474086 -217213768 + AT_rich Low_complexity Low_complexity 1 21 0 2451 62 0 3 chr2 33474215 33474520 -217213334 - AluY SINE Alu -7 304 1 619 171 45 45 chr2 33474681 33474857 -217212997 - MER104 DNA MER2_type -1 179 4 2252 117 0 3 chr2 33475624 33475932 -217211922 - AluSx SINE Alu -5 307 1 1470 161 39 39 chr2 33476307 33476618 -217211236 + MER2 DNA MER2_type 3 313 -32 3987 165 32 30 chr2 33477340 33477964 -217209890 - L1MB8 LINE L1 -3 6175 5547 2175 129 3 0 chr2 33477964 33478274 -217209580 + AluSx SINE Alu 1 311 -1 3987 165 32 30 chr2 33478274 33478426 -217209428 - L1MB8 LINE L1 -631 5547 5397 2315 85 17 0 chr2 33478844 33479137 -217208717 - AluSx SINE Alu -14 298 1 204 40 0 0 chr2 33479643 33479668 -217208186 + (T)n Simple_repeat Simple_repeat 1 25 0 5604 79 34 53 chr2 33480435 33481628 -217206226 - SVA Other Other -518 868 62 1184 43 0 12 chr2 33481628 33481792 -217206062 + (GGGAGA)n Simple_repeat Simple_repeat 1 162 0 5604 79 34 53 chr2 33481792 33481853 -217206001 - SVA Other Other -1324 62 1 324 268 101 18 chr2 33482222 33482390 -217205464 - L1MDa LINE L1 -3855 2685 2504 300 53 0 0 chr2 33482653 33482691 -217205163 + (CA)n Simple_repeat Simple_repeat 1 38 0 288 275 147 32 chr2 33482921 33483230 -217204624 - L1MDa LINE L1 -800 2101 1663 21 71 0 0 chr2 33483556 33483598 -217204256 + AT_rich Low_complexity Low_complexity 1 42 0 976 231 5 0 chr2 33483608 33483794 -217204060 + MER58A DNA MER1_type 34 220 -4 1008 281 104 72 chr2 33483797 33484573 -217203281 - L1MDa LINE L1 -5307 1223 423 282 242 15 0 chr2 33484690 33484756 -217203098 + MIR SINE MIR 17 83 -179 1089 189 51 32 chr2 33484766 33484807 -217203047 - MER58A DNA MER1_type -2199 221 182 1735 170 77 12 chr2 33484807 33485130 -217202724 + MER2 DNA MER2_type 1 344 0 1089 189 51 32 chr2 33485130 33485305 -217202549 - MER58A DNA MER1_type -2238 182 1 390 190 50 33 chr2 33485306 33485410 -217202444 + MIR SINE MIR 89 197 -65 3932 155 26 8 chr2 33485410 33486034 -217201820 + MER41B LTR ERV1 1 635 0 390 190 50 33 chr2 33486034 33486050 -217201804 + MIR SINE MIR 197 211 -51 810 245 62 29 chr2 33486208 33486481 -217201373 - MLT1I LTR MaLR -25 384 103 683 265 61 13 chr2 33486497 33486838 -217201016 + LTR16A LTR ERVL 52 440 -10 331 266 43 11 chr2 33486970 33487064 -217200790 - MIR SINE MIR -1 261 165 792 210 7 0 chr2 33487123 33487266 -217200588 + MER58B DNA MER1_type 198 341 0 3028 113 64 43 chr2 33487357 33487547 -217200307 + MER4D LTR ERV1 1 186 -593 2096 122 3 3 chr2 33487547 33487843 -217200011 + AluSp SINE Alu 1 296 -17 3028 113 64 43 chr2 33487843 33488421 -217199433 + MER4D LTR ERV1 186 779 0 271 286 57 0 chr2 33489107 33489177 -217198677 - MIR SINE MIR -174 88 15 1685 136 99 7 chr2 33489417 33489690 -217198164 - AluJb SINE Alu -12 300 3 942 139 0 0 chr2 33489694 33489831 -217198023 - L1PB4 LINE L1 -1 6155 6019 216 218 18 0 chr2 33489878 33489933 -217197921 + (TGAA)n Simple_repeat Simple_repeat 2 57 0 220 287 195 11 chr2 33490049 33490136 -217197718 - L2 LINE L2 -2 3270 3168 574 28 83 0 chr2 33491275 33491347 -217196507 - MADE1 DNA Mariner -2 78 1 2118 113 0 0 chr2 33491721 33492005 -217195849 + AluSx SINE Alu 1 284 -28 610 30 116 0 chr2 33492005 33492300 -217195554 + (TA)n Simple_repeat Simple_repeat 1 329 0 2441 72 0 0 chr2 33493081 33493372 -217194482 - AluSg SINE Alu -19 291 1 2118 99 0 51 chr2 33493926 33494238 -217193616 - AluSx SINE Alu -16 296 1 230 259 34 13 chr2 33494570 33494811 -217193043 + CT-rich Low_complexity Low_complexity 1 246 0 2153 131 3 6 chr2 33495692 33496004 -217191850 - AluSx SINE Alu -1 311 1 914 129 15 0 chr2 33496005 33496137 -217191717 - AluSq/x SINE Alu -178 134 1 249 57 0 0 chr2 33496149 33496184 -217191670 + (T)n Simple_repeat Simple_repeat 1 35 0 332 299 16 8 chr2 33496424 33496477 -217191377 - MIR3 SINE MIR -79 129 78 2669 75 53 8 chr2 33496477 33496836 -217191018 + THE1C LTR MaLR 1 375 0 332 299 16 8 chr2 33496836 33496909 -217190945 - MIR3 SINE MIR -130 78 2 182 354 73 0 chr2 33497363 33497445 -217190409 + L2 LINE L2 3141 3228 -44 809 126 0 0 chr2 33497548 33497659 -217190195 - HY1 scRNA scRNA -1 111 1 450 296 85 0 chr2 33497769 33497945 -217189909 - MIR3 SINE MIR -3 205 15 212 235 0 47 chr2 33499249 33499334 -217188520 + C-rich Low_complexity Low_complexity 2 82 0 21 89 0 0 chr2 33499476 33499532 -217188322 + GC_rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 33499829 33499850 -217188004 + (CCG)n Simple_repeat Simple_repeat 1 21 0 216 125 0 42 chr2 33500030 33500078 -217187776 + (CCCG)n Simple_repeat Simple_repeat 4 49 0 723 198 87 52 chr2 33502466 33502482 -217185372 + AluSg/x SINE Alu 120 134 -178 2242 103 13 7 chr2 33502482 33502783 -217185071 + AluSx SINE Alu 1 303 -9 723 198 87 52 chr2 33502783 33502938 -217184916 + AluSg/x SINE Alu 134 297 -15 420 268 47 37 chr2 33503727 33503920 -217183934 + MIR SINE MIR 2 191 -64 1784 161 2 99 chr2 33506478 33506901 -217180953 - MLT1B LTR MaLR -6 384 3 273 271 239 32 chr2 33507192 33507347 -217180507 - MER5A DNA MER1_type -2 187 1 23 54 0 0 chr2 33507687 33507724 -217180130 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 33507835 33507864 -217179990 + AT_rich Low_complexity Low_complexity 1 29 0 8917 117 41 5 chr2 33508102 33509436 -217178418 - Tigger1 DNA MER2_type 0 2418 1037 3904 140 32 2 chr2 33509434 33510025 -217177829 - Tigger1 DNA MER2_type -1809 609 1 * 398 309 29 62 chr2 33510277 33510520 -217177334 + MIR SINE MIR 2 236 -26 383 165 25 0 chr2 33511749 33511828 -217176026 + (TATATG)n Simple_repeat Simple_repeat 2 82 0 2159 125 0 0 chr2 33511829 33512124 -217175730 - AluSx SINE Alu -13 299 5 209 302 43 60 chr2 33512324 33512440 -217175414 + MIR SINE MIR 67 180 -82 204 182 0 73 chr2 33512497 33512552 -217175302 + L2 LINE L2 3171 3221 -92 339 25 0 0 chr2 33512606 33512646 -217175208 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 294 324 135 36 chr2 33512841 33513147 -217174707 - L2 LINE L2 -181 3132 2783 21 36 0 0 chr2 33513635 33513663 -217174191 + AT_rich Low_complexity Low_complexity 1 28 0 2425 80 3 0 chr2 33513871 33514170 -217173684 + AluSq SINE Alu 1 300 -13 785 204 87 0 chr2 33514977 33515149 -217172705 + MER5A DNA MER1_type 3 189 0 1863 149 0 21 chr2 33515430 33515718 -217172136 - AluJo SINE Alu -30 282 1 418 292 45 17 chr2 33515900 33516078 -217171776 + MER5A DNA MER1_type 7 189 0 22 80 0 0 chr2 33516934 33516984 -217170870 + AT_rich Low_complexity Low_complexity 1 50 0 2170 77 11 0 chr2 33516998 33517272 -217170582 + AluSc SINE Alu 31 307 -2 6180 226 46 21 chr2 33517390 33520187 -217167667 - L1MC1 LINE L1 -2 6400 3676 216 0 0 0 chr2 33520187 33520211 -217167643 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1563 166 12 4 chr2 33520217 33520470 -217167384 - AluSx SINE Alu -54 258 4 6180 226 46 21 chr2 33520470 33520921 -217166933 - L1MC1 LINE L1 -2730 3672 2161 1070 178 0 0 chr2 33520923 33521103 -217166751 - AluJb SINE Alu -4 308 129 2250 84 3 36 chr2 33521125 33521433 -217166421 - AluSx SINE Alu -14 298 1 387 0 0 0 chr2 33521437 33521480 -217166374 + (TG)n Simple_repeat Simple_repeat 2 44 0 13391 198 30 14 chr2 33521491 33523210 -217164644 - L1PA15 LINE L1 -13 6152 4462 375 41 0 0 chr2 33523210 33523259 -217164595 + (TG)n Simple_repeat Simple_repeat 2 50 0 13391 198 30 14 chr2 33523259 33524785 -217163069 - L1PA15 LINE L1 -1703 4462 2839 2032 151 58 28 chr2 33524785 33525149 -217162705 + THE1C LTR MaLR 1 375 0 13391 198 30 14 chr2 33525149 33525614 -217162240 - L1PA15 LINE L1 -3326 2839 2383 6927 111 23 13 chr2 33525649 33526836 -217161018 - L1MA1 LINE L1 0 7721 6520 4818 218 24 25 chr2 33526840 33528626 -217159228 - L1PA13 LINE L1 -3755 3829 2018 315 321 43 52 chr2 33529773 33530100 -217157754 - L1PA13 LINE L1 -7202 379 56 * 10934 150 42 23 chr2 33530078 33533511 -217154343 - L1MA1 LINE L1 -1647 5937 2478 1341 160 15 46 chr2 33533535 33533797 -217154057 - L1MCa LINE L1 -6167 259 6 2349 112 77 0 chr2 33533827 33534165 -217153689 + THE1B LTR MaLR 1 364 0 11010 92 35 26 chr2 33534165 33535730 -217152124 + THE1B-int LTR MaLR 1 1580 0 2546 118 3 6 chr2 33535730 33536095 -217151759 + THE1B LTR MaLR 1 364 0 199 292 62 0 chr2 33536604 33536669 -217151185 + L3b LINE CR1 1429 1497 -86 189 278 0 19 chr2 33536738 33536792 -217151062 - MIR SINE MIR -61 147 95 2286 64 3 37 chr2 33536847 33537172 -217150682 + AluSx SINE Alu 1 315 0 454 283 14 0 chr2 33537475 33537620 -217150234 - MIR SINE MIR -14 248 102 236 204 0 0 chr2 33537881 33537930 -217149924 - L2 LINE L2 -1 3312 3264 261 160 0 20 chr2 33538254 33538304 -217149550 + L2 LINE L2 3264 3312 -1 1049 281 42 85 chr2 33538578 33538720 -217149134 - MLT1K LTR MaLR -15 573 427 805 208 6 44 chr2 33538720 33538903 -217148951 - MER45A DNA AcHobo -2 176 1 1049 281 42 85 chr2 33538903 33539301 -217148553 - MLT1K LTR MaLR -161 427 56 204 267 89 40 chr2 33539710 33539811 -217148043 + MIR SINE MIR 33 138 -70 1477 225 97 36 chr2 33540019 33540485 -217147369 + MLT1D LTR MaLR 12 505 0 886 185 201 6 chr2 33541354 33541678 -217146176 - LTR37A LTR ERV1 0 426 40 569 250 199 9 chr2 33541948 33542164 -217145690 + MIR SINE MIR 6 262 0 968 147 0 0 chr2 33542183 33542319 -217145535 + FRAM SINE Alu 18 153 -23 320 346 21 56 chr2 33543920 33544154 -217143700 - L3 LINE CR1 -23 1554 1329 220 239 60 0 chr2 33544572 33544639 -217143215 - L2 LINE L2 -284 2988 2918 282 267 76 0 chr2 33545935 33546040 -217141814 - MIR3 SINE MIR -15 193 81 360 0 0 0 chr2 33546177 33546217 -217141637 + (TG)n Simple_repeat Simple_repeat 2 41 0 857 254 37 16 chr2 33546424 33546668 -217141186 - MIR SINE MIR -3 259 11 2471 81 0 0 chr2 33546677 33546974 -217140880 - AluSp SINE Alu -16 297 1 441 226 50 83 chr2 33546979 33547115 -217140739 + MER5B DNA MER1_type 2 132 -46 1668 199 24 0 chr2 33547115 33547402 -217140452 + AluJo SINE Alu 1 294 -18 441 226 50 83 chr2 33547402 33547446 -217140408 + MER5B DNA MER1_type 132 176 -2 365 205 26 0 chr2 33547533 33547611 -217140243 - MER5A DNA MER1_type -83 106 27 2397 74 0 26 chr2 33547707 33548018 -217139836 + AluY SINE Alu 1 303 -8 316 261 118 0 chr2 33548030 33548149 -217139705 - MIR SINE MIR -26 236 104 2095 164 28 19 chr2 33548325 33548685 -217139169 - MLT1A1 LTR MaLR -2 363 1 329 247 22 11 chr2 33548688 33548777 -217139077 - L2 LINE L2 -1 3271 3182 358 226 122 37 chr2 33548888 33549052 -217138802 - MIR SINE MIR -83 179 2 2211 103 0 0 chr2 33549087 33549392 -217138462 - AluSx SINE Alu 0 305 1 1725 182 24 0 chr2 33549436 33549733 -217138121 + AluJo SINE Alu 1 304 -8 394 313 66 24 chr2 33550269 33550435 -217137419 + MER5A DNA MER1_type 14 186 -3 2533 75 7 0 chr2 33550443 33550750 -217137104 + AluSc SINE Alu 1 309 0 1191 221 75 31 chr2 33550795 33551144 -217136710 + MLT1A2 LTR MaLR 9 372 -2 811 143 119 0 chr2 33551157 33551325 -217136529 + MER5A DNA MER1_type 1 188 -1 447 213 11 0 chr2 33551338 33551432 -217136422 + MER5A DNA MER1_type 10 104 -85 184 303 11 56 chr2 33551519 33551608 -217136246 + MER5B DNA MER1_type 35 119 -59 444 89 0 4 chr2 33551817 33552031 -217135823 + AluSg SINE Alu 1 292 -19 385 282 75 29 chr2 33552152 33552326 -217135528 - MER5A DNA MER1_type 0 189 8 243 322 44 0 chr2 33552361 33552451 -217135403 - MER5A DNA MER1_type -26 163 70 1905 131 89 145 chr2 33552458 33552940 -217134914 + LTR32 LTR ERVL 15 469 -2 949 211 11 0 chr2 33553487 33553672 -217134182 - MER5A DNA MER1_type -2 187 1 195 69 0 0 chr2 33554871 33554900 -217132954 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2005 134 0 0 chr2 33554908 33555185 -217132669 - AluSx SINE Alu -35 277 1 365 309 0 0 chr2 33555567 33555664 -217132190 - MIR SINE MIR -115 147 51 199 340 19 9 chr2 33555721 33555827 -217132027 + L3 LINE CR1 1119 1225 -352 2350 136 46 35 chr2 33555921 33556355 -217131499 + MER65A LTR ERV1 3 441 -4 401 113 75 0 chr2 33556617 33556697 -217131157 - L1MB8 LINE L1 0 6178 6093 1892 118 78 4 chr2 33556720 33556991 -217130863 + AluSx SINE Alu 1 291 -21 261 0 0 0 chr2 33556994 33557023 -217130831 + (TA)n Simple_repeat Simple_repeat 1 29 0 1187 245 136 45 chr2 33557357 33557802 -217130052 - MLT1G1 LTR MaLR -8 546 82 1995 127 38 0 chr2 33557802 33558094 -217129760 - AluSq SINE Alu -10 303 1 1187 245 136 45 chr2 33558094 33558172 -217129682 - MLT1G1 LTR MaLR -472 82 13 562 174 0 0 chr2 33558343 33558429 -217129425 - AluS SINE Alu -226 87 2 2268 106 7 3 chr2 33558589 33558890 -217128964 - AluSx SINE Alu -10 302 1 967 92 0 0 chr2 33559284 33559403 -217128451 - AluSx SINE Alu -24 288 170 652 83 0 0 chr2 33559403 33559487 -217128367 - AluSx SINE Alu -227 85 2 512 262 131 34 chr2 33559972 33560209 -217127645 - MIR SINE MIR 0 262 3 233 282 51 64 chr2 33560651 33560807 -217127047 - L1ME4a LINE L1 -14 6107 5954 1526 280 167 24 chr2 33560834 33561515 -217126339 - L2 LINE L2 -52 3261 2679 1610 213 108 16 chr2 33561515 33561943 -217125911 + MLT1C LTR MaLR 1 467 0 1526 280 167 24 chr2 33561943 33562507 -217125347 - L2 LINE L2 -634 2679 1823 281 256 84 89 chr2 33562507 33562552 -217125302 - L1ME4a LINE L1 -250 5871 5827 2207 95 6 15 chr2 33562552 33562878 -217124976 + L1MA4A LINE L1 5978 6300 -3 281 256 84 89 chr2 33562878 33562929 -217124925 - L1ME4a LINE L1 -294 5827 5777 2408 88 0 0 chr2 33562929 33563225 -217124629 - AluSc SINE Alu -13 296 1 281 256 84 89 chr2 33563225 33563318 -217124536 - L1ME4a LINE L1 -344 5777 5682 242 227 59 84 chr2 33563352 33563471 -217124383 - L1ME4a LINE L1 -509 5612 5497 2321 141 40 5 chr2 33563531 33563906 -217123948 + MLT1B LTR MaLR 3 390 0 21 36 0 0 chr2 33563991 33564019 -217123835 + AT_rich Low_complexity Low_complexity 1 28 0 232 298 39 112 chr2 33564148 33564433 -217123421 + L2 LINE L2 3007 3270 -2 214 331 143 8 chr2 33564773 33564906 -217122948 + L2 LINE L2 3121 3271 -1 232 182 0 23 chr2 33565372 33565416 -217122438 - L1ME LINE L1 -527 5594 5552 25 0 0 0 chr2 33565639 33565664 -217122190 + AT_rich Low_complexity Low_complexity 1 25 0 395 161 3 6 chr2 33567196 33567282 -217120572 - FLAM_A SINE Alu -2 131 69 2383 127 38 17 chr2 33567853 33568270 -217119584 - MSTA LTR MaLR -2 426 1 899 167 6 17 chr2 33568634 33568808 -217119046 - MER5B DNA MER1_type -6 172 1 25 0 0 0 chr2 33568911 33568936 -217118918 + AT_rich Low_complexity Low_complexity 1 25 0 2152 133 20 0 chr2 33568948 33569249 -217118605 + AluSx SINE Alu 1 307 -5 617 216 144 12 chr2 33569559 33569726 -217118128 - MER5A DNA MER1_type 0 189 1 2148 64 0 0 chr2 33569813 33570090 -217117764 - AluY SINE Alu 0 310 34 2089 139 7 0 chr2 33571533 33571842 -217116012 - AluSx SINE Alu -1 311 1 1548 154 53 53 chr2 33571920 33572219 -217115635 - AluJb SINE Alu -11 301 3 196 236 63 94 chr2 33572365 33572492 -217115362 + MIR3 SINE MIR 73 195 -13 26 0 0 0 chr2 33572582 33572608 -217115246 + AT_rich Low_complexity Low_complexity 1 26 0 608 282 66 13 chr2 33572718 33572945 -217114909 + MIR SINE MIR 8 246 -16 243 259 0 47 chr2 33574441 33574526 -217113328 + T-rich Low_complexity Low_complexity 5 85 0 976 271 4 0 chr2 33574640 33574880 -217112974 - MIR SINE MIR -4 258 18 1944 190 12 0 chr2 33574883 33575214 -217112640 - MER58B DNA MER1_type -1 340 6 738 262 106 67 chr2 33576280 33576685 -217111169 - L2 LINE L2 -2 3311 2891 2329 210 92 13 chr2 33576987 33577511 -217110343 - MLT1F1 LTR MaLR -2 565 1 997 222 88 50 chr2 33577650 33578073 -217109781 + L1MC5 LINE L1 7473 7911 -50 1132 246 117 32 chr2 33579002 33579408 -217108446 - L1ME3A LINE L1 -13 6140 5701 1709 150 13 17 chr2 33579406 33579706 -217108148 - L1MA9 LINE L1 0 6312 6014 2267 87 3 10 chr2 33579762 33580061 -217107793 + AluSc SINE Alu 1 297 -12 287 298 64 0 chr2 33580500 33580594 -217107260 - MIR SINE MIR 0 262 163 1337 101 0 0 chr2 33580595 33580764 -217107090 + AluSg SINE Alu 1 169 -141 2221 116 0 0 chr2 33581404 33581706 -217106148 + AluSx SINE Alu 3 304 -8 291 304 11 11 chr2 33581819 33581911 -217105943 - MIR SINE MIR -100 108 17 376 252 69 38 chr2 33583073 33583232 -217104622 - L1ME3A LINE L1 -2386 5405 5242 265 286 0 0 chr2 33583608 33583671 -217104183 - L2 LINE L2 0 3313 3251 26 0 0 0 chr2 33584849 33584875 -217102979 + AT_rich Low_complexity Low_complexity 1 26 0 234 260 0 0 chr2 33585297 33585347 -217102507 - L2 LINE L2 -8 3305 3256 435 226 111 69 chr2 33588245 33588334 -217099520 - L1ME3A LINE L1 -231 5939 5855 861 162 20 66 chr2 33588334 33588532 -217099322 - MER5A DNA MER1_type 0 189 1 435 226 111 69 chr2 33588532 33588664 -217099190 - L1ME3A LINE L1 -315 5855 5703 2334 100 0 0 chr2 33588664 33588965 -217098889 - AluSx SINE Alu -11 301 1 435 226 111 69 chr2 33588965 33589003 -217098851 - L1ME3A LINE L1 -467 5703 5668 448 229 132 14 chr2 33589019 33589163 -217098691 - MER112 DNA MER1_type -98 162 2 285 268 136 92 chr2 33589228 33589545 -217098309 - L1ME3A LINE L1 -1085 5044 4714 844 306 92 63 chr2 33589588 33589921 -217097933 - L1ME3A LINE L1 -5124 995 673 1699 199 0 7 chr2 33589921 33590227 -217097627 - AluJo SINE Alu -8 304 1 844 306 92 63 chr2 33590227 33590859 -217096995 - L1ME3A LINE L1 -5446 673 2 313 279 121 36 chr2 33593192 33593332 -217094522 - MIR SINE MIR -80 182 31 2369 94 3 0 chr2 33593480 33593789 -217094065 - AluSg SINE Alu 0 310 1 337 322 85 0 chr2 33593859 33593977 -217093877 - L2 LINE L2 -1 3271 3144 1324 208 33 42 chr2 33594029 33594424 -217093430 - L1ME3A LINE L1 -492 5678 5288 24183 78 3 3 chr2 33596336 33600234 -217087620 - L1PA7 LINE L1 0 6154 2241 2589 224 135 20 chr2 33600996 33601905 -217085949 + Charlie7 DNA MER1_type 1487 2500 -112 186 206 29 0 chr2 33601951 33601985 -217085869 - MIR3 SINE MIR -22 186 152 1868 147 0 17 chr2 33602038 33602337 -217085517 - AluJo SINE Alu -4 308 15 279 79 0 0 chr2 33602338 33602376 -217085478 + (T)n Simple_repeat Simple_repeat 1 38 0 350 335 13 33 chr2 33602838 33602945 -217084909 + MIR SINE MIR 5 110 -152 2299 77 32 0 chr2 33602945 33603230 -217084624 - AluSg SINE Alu -16 294 1 350 335 13 33 chr2 33603230 33603274 -217084580 + MIR SINE MIR 110 153 -109 1574 211 3 3 chr2 33603343 33603641 -217084213 + AluJo SINE Alu 2 299 -13 594 228 122 5 chr2 33604863 33605060 -217082794 - L1MC3 LINE L1 -672 7113 6894 2171 110 14 3 chr2 33605087 33605378 -217082476 - AluSx SINE Alu -18 294 1 1631 104 59 66 chr2 33605378 33605667 -217082187 - L1MC1 LINE L1 -4 6329 6043 488 127 0 0 chr2 33605669 33605748 -217082106 + pTR5 LTR ERV1 741 819 -1619 * 21573 75 5 8 chr2 33605741 33608536 -217079318 - HERV9 LTR ERV1 -4367 4032 1246 6319 94 135 75 chr2 33608735 33610201 -217077653 - pTR5 LTR ERV1 0 2438 741 240 132 0 0 chr2 33610202 33610240 -217077614 - L1MC1 LINE L1 -294 6039 6002 278 330 19 10 chr2 33610524 33610627 -217077227 - MIR3 SINE MIR -13 195 92 210 71 0 0 chr2 33612725 33612753 -217075101 + (TG)n Simple_repeat Simple_repeat 2 29 0 261 0 0 0 chr2 33612859 33612888 -217074966 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr2 33613082 33613112 -217074742 + AT_rich Low_complexity Low_complexity 1 30 0 3452 224 58 28 chr2 33613542 33614884 -217072970 - L1ME2 LINE L1 -10 6154 4774 561 155 21 21 chr2 33614884 33614981 -217072873 - Tigger7 DNA MER2_type 0 2587 2491 1060 155 48 138 chr2 33614984 33615274 -217072580 - Tigger7 DNA MER2_type -469 264 1 559 260 15 32 chr2 33615276 33615478 -217072376 - L1ME2 LINE L1 -1373 4773 4578 1771 167 98 9 chr2 33615486 33615905 -217071949 + Charlie1b DNA MER1_type 68 523 0 2007 245 84 80 chr2 33615905 33616058 -217071796 - L1ME2 LINE L1 -1566 4580 4429 2286 109 0 3 chr2 33616058 33616360 -217071494 - AluSg SINE Alu -9 301 1 2007 245 84 80 chr2 33616360 33616519 -217071335 - L1ME2 LINE L1 -1717 4429 4272 2362 244 38 10 chr2 33616519 33617023 -217070831 - LTR40a LTR ERVL 0 519 2 2007 245 84 80 chr2 33617023 33617487 -217070367 - L1ME2 LINE L1 -1874 4272 3794 1544 187 26 0 chr2 33617487 33617755 -217070099 + AluJo SINE Alu 6 280 -32 2007 245 84 80 chr2 33617755 33618120 -217069734 - L1ME2 LINE L1 -2352 3794 3432 374 265 108 32 chr2 33618226 33618411 -217069443 - L1 LINE L1 -821 5325 5127 3062 207 26 32 chr2 33618437 33619123 -217068731 + Cheshire DNA MER1_type 176 857 -1563 1593 130 8 28 chr2 33619124 33619378 -217068476 + AluJo SINE Alu 33 281 -31 3117 180 34 17 chr2 33619379 33619695 -217068159 + Cheshire DNA MER1_type 1476 1785 -635 1930 177 33 6 chr2 33619695 33620028 -217067826 - MER2 DNA MER2_type -2 342 1 3117 180 34 17 chr2 33620028 33620361 -217067493 + Cheshire DNA MER1_type 1785 2136 -284 574 139 0 0 chr2 33620386 33620472 -217067382 - L1MC/D LINE L1 -564 5678 5593 2113 165 20 28 chr2 33620472 33620867 -217066987 - L1MC1 LINE L1 0 6333 5942 1327 177 47 11 chr2 33620867 33621144 -217066710 + MER58D DNA MER1_type 100 386 0 294 296 112 8 chr2 33623041 33623166 -217064688 + MIR3 SINE MIR 34 171 -37 240 237 68 84 chr2 33623166 33623334 -217064520 - MER5A DNA MER1_type 0 189 2 849 246 94 79 chr2 33623387 33623717 -217064137 - MLT1F1 LTR MaLR -207 360 1 478 260 49 0 chr2 33623826 33623949 -217063905 - MLT1I LTR MaLR -10 399 271 448 230 0 11 chr2 33623958 33624045 -217063809 - MLT1I LTR MaLR -96 313 228 3263 139 100 129 chr2 33624088 33624966 -217062888 - MER21A LTR ERV1 -77 854 2 813 254 80 14 chr2 33624976 33625189 -217062665 - MLT1I LTR MaLR -175 234 8 2146 130 3 0 chr2 33625826 33626127 -217061727 - AluSx SINE Alu -3 309 8 2082 114 13 32 chr2 33626662 33626795 -217061059 + AluSx SINE Alu 1 135 -177 2473 74 0 3 chr2 33626795 33627104 -217060750 + AluY SINE Alu 1 308 -3 2082 114 13 32 chr2 33627104 33627301 -217060553 + AluSx SINE Alu 135 312 0 3140 131 65 48 chr2 33628291 33628749 -217059105 - LTR59 LTR ERV1 -5 592 120 2323 82 0 7 chr2 33628749 33629040 -217058814 - AluSc SINE Alu -18 291 3 3140 131 65 48 chr2 33629040 33629163 -217058691 - LTR59 LTR ERV1 -477 120 1 2678 132 44 2 chr2 33629523 33629933 -217057921 - MSTA LTR MaLR -1 427 1 1850 75 0 0 chr2 33631025 33631283 -217056571 - AluSc SINE Alu 0 339 82 195 309 41 31 chr2 33631379 33631476 -217056378 - L2 LINE L2 -44 3269 3172 2076 117 0 3 chr2 33632225 33632531 -217055323 - AluSx SINE Alu 0 309 5 1719 215 52 34 chr2 33633070 33633554 -217054300 - MER39 LTR ERV1 -1 706 1 302 322 0 0 chr2 33633554 33633641 -217054213 + (CATA)n Simple_repeat Simple_repeat 2 88 0 1687 174 116 25 chr2 33633842 33633884 -217053970 + MSTD LTR MaLR 1 38 -358 2786 83 16 16 chr2 33633884 33634259 -217053595 + THE1C LTR MaLR 1 375 0 1687 174 116 25 chr2 33634259 33634579 -217053275 + MSTD LTR MaLR 38 396 0 2129 83 83 3 chr2 33634644 33634932 -217052922 - AluY SINE Alu 0 311 1 1188 242 117 42 chr2 33637105 33637534 -217050320 + MLT1C LTR MaLR 7 467 0 643 278 90 18 chr2 33637759 33637982 -217049872 - MIR SINE MIR -16 246 8 313 209 0 30 chr2 33638264 33638331 -217049523 - MIR SINE MIR -11 251 187 30 0 0 0 chr2 33639077 33639107 -217048747 + AT_rich Low_complexity Low_complexity 1 30 0 1344 194 92 7 chr2 33639292 33639575 -217048279 - AluJo SINE Alu -5 307 1 2434 81 0 0 chr2 33640379 33640677 -217047177 + AluSg SINE Alu 1 298 -12 493 214 86 0 chr2 33640785 33640902 -217046952 + L2 LINE L2 3187 3313 0 26 30 0 0 chr2 33641021 33641054 -217046800 + AT_rich Low_complexity Low_complexity 1 33 0 2452 99 0 0 chr2 33641081 33641393 -217046461 + AluSx SINE Alu 1 312 0 1128 179 10 5 chr2 33641595 33641796 -217046058 + MER20 DNA MER1_type 18 219 0 650 313 61 4 chr2 33642678 33642901 -217044953 - MIR SINE MIR -11 251 18 221 245 0 19 chr2 33643352 33643405 -217044449 + (TG)n Simple_repeat Simple_repeat 1 52 0 249 330 43 64 chr2 33643536 33643724 -217044130 - MIR3 SINE MIR -9 199 16 193 273 0 0 chr2 33643754 33643798 -217044056 + L2 LINE L2 3226 3269 -3 197 302 139 23 chr2 33644189 33644275 -217043579 + MIR SINE MIR 71 166 -96 282 56 0 0 chr2 33644387 33644423 -217043431 + (CA)n Simple_repeat Simple_repeat 1 36 0 254 241 17 0 chr2 33645813 33645871 -217041983 + (TA)n Simple_repeat Simple_repeat 2 60 0 195 42 0 0 chr2 33646018 33646042 -217041812 + (CAT)n Simple_repeat Simple_repeat 2 25 0 25 0 0 0 chr2 33646514 33646539 -217041315 + AT_rich Low_complexity Low_complexity 1 25 0 438 246 8 23 chr2 33646609 33646731 -217041123 + MIR3 SINE MIR 68 187 -21 858 245 96 42 chr2 33647385 33647986 -217039868 + L1ME LINE L1 34 860 -5210 1567 299 31 11 chr2 33647987 33648625 -217039229 + L1ME LINE L1 972 1622 -4639 679 170 0 52 chr2 33648985 33649120 -217038734 + FLAM_A SINE Alu 14 141 -1 271 233 87 68 chr2 33649532 33649635 -217038219 - Charlie7 DNA MER1_type -2507 105 1 269 312 78 37 chr2 33649826 33650121 -217037733 - L1ME4a LINE L1 -106 6015 5709 * 355 280 104 53 chr2 33649940 33650517 -217037337 - L1MA6 LINE L1 -402 5898 5286 2041 105 10 27 chr2 33650650 33650946 -217036908 - AluSx SINE Alu -21 291 1 237 339 35 17 chr2 33651736 33651851 -217036003 - MIR3 SINE MIR -23 185 69 2825 181 57 25 chr2 33652740 33653338 -217034516 - L1MB4 LINE L1 -6 6174 5558 1050 188 24 24 chr2 33654435 33654648 -217033206 - MER20 DNA MER1_type -6 213 1 255 199 39 55 chr2 33654947 33655128 -217032726 + (TATG)n Simple_repeat Simple_repeat 1 178 0 321 173 33 53 chr2 33655161 33655311 -217032543 + (TATG)n Simple_repeat Simple_repeat 3 149 0 273 192 51 45 chr2 33655323 33655500 -217032354 + (TATG)n Simple_repeat Simple_repeat 1 178 0 262 197 41 48 chr2 33655535 33655682 -217032172 + (TATG)n Simple_repeat Simple_repeat 4 149 0 381 22 0 0 chr2 33655794 33655840 -217032014 + (TG)n Simple_repeat Simple_repeat 2 47 0 8755 115 17 52 chr2 33657366 33657649 -217030205 - Tigger1 DNA MER2_type -1 2417 2126 1956 133 14 0 chr2 33657649 33657927 -217029927 - AluSx SINE Alu -17 295 14 8755 115 17 52 chr2 33657927 33659082 -217028772 - Tigger1 DNA MER2_type -292 2126 1030 692 220 58 93 chr2 33659255 33659514 -217028340 - MER112 DNA MER1_type -3 257 8 193 250 0 0 chr2 33662059 33662103 -217025751 - MIR SINE MIR -125 137 94 960 153 0 7 chr2 33662309 33662453 -217025401 - FRAM SINE Alu -24 152 10 201 363 21 58 chr2 33665251 33665441 -217022413 + L3 LINE CR1 62 244 -1333 976 98 0 55 chr2 33665931 33666095 -217021759 - L1MB7 LINE L1 -320 5864 5710 1869 126 0 4 chr2 33666095 33666349 -217021505 - AluSx SINE Alu -59 253 1 347 179 214 0 chr2 33666447 33666531 -217021323 - MER58 DNA MER1_type -1 2419 2318 326 267 69 30 chr2 33666533 33666634 -217021220 - MER58 DNA MER1_type -110 105 1 1306 109 14 19 chr2 33667042 33667252 -217020602 + L1MB7 LINE L1 5585 5793 -391 459 185 0 0 chr2 33667252 33667344 -217020510 + (CA)n Simple_repeat Simple_repeat 1 92 0 1969 150 34 40 chr2 33667344 33667724 -217020130 + L1MB7 LINE L1 5788 6165 -19 225 83 0 0 chr2 33670398 33670434 -217017420 + (A)n Simple_repeat Simple_repeat 1 36 0 2258 92 3 7 chr2 33671760 33672064 -217015790 - AluY SINE Alu -8 303 1 231 279 15 0 chr2 33672330 33672398 -217015456 + (TATG)n Simple_repeat Simple_repeat 3 71 0 4961 74 13 11 chr2 33672398 33673033 -217014821 - L1PA14 LINE L1 -2 6159 5524 216 0 0 0 chr2 33673367 33673391 -217014463 + (T)n Simple_repeat Simple_repeat 1 24 0 327 259 36 39 chr2 33674294 33674440 -217013414 + MLT1H LTR MaLR 79 233 -182 260 267 0 0 chr2 33675965 33676025 -217011829 - MIR SINE MIR -12 250 191 22 56 0 0 chr2 33676204 33676240 -217011614 + AT_rich Low_complexity Low_complexity 1 36 0 2283 108 0 3 chr2 33676334 33676630 -217011224 + AluSx SINE Alu 1 295 -17 236 370 22 29 chr2 33677155 33677293 -217010561 + MIR SINE MIR 120 256 -6 2278 217 63 47 chr2 33677716 33677758 -217010096 - MLT1F1 LTR MaLR 0 567 527 2348 81 3 0 chr2 33677758 33678053 -217009801 + AluSg SINE Alu 1 296 -14 2278 217 63 47 chr2 33678053 33678445 -217009409 - MLT1F1 LTR MaLR -40 527 120 823 180 8 0 chr2 33678445 33678573 -217009281 - FLAM_C SINE Alu -2 131 3 2278 217 63 47 chr2 33678573 33678695 -217009159 - MLT1F1 LTR MaLR -447 120 1 231 226 94 94 chr2 33682088 33682247 -217005607 - L1ME3A LINE L1 -38 6132 5974 514 248 132 74 chr2 33682366 33682813 -217005041 - HAL1 LINE L1 -9 2498 2026 2314 101 3 7 chr2 33683062 33683368 -217004486 - AluSq SINE Alu -8 305 1 260 198 0 121 chr2 33684410 33684501 -217003353 - L2 LINE L2 0 3272 3193 433 221 158 8 chr2 33684565 33684692 -217003162 + MER5A DNA MER1_type 4 149 -40 328 244 205 8 chr2 33684597 33684724 -217003130 - MER5A DNA MER1_type -24 165 14 * 2367 92 7 0 chr2 33684970 33685264 -217002590 + AluSg SINE Alu 1 296 -14 192 345 17 0 chr2 33685389 33685447 -217002407 - L2 LINE L2 -681 2633 2575 215 299 86 40 chr2 33685737 33685911 -217001943 - L2 LINE L2 -1010 2304 2123 198 265 0 0 chr2 33687881 33687930 -216999924 - L2 LINE L2 -5 3267 3219 505 259 143 5 chr2 33688517 33688706 -216999148 + MIR SINE MIR 20 234 -28 2037 150 32 9 chr2 33689709 33690049 -216997805 + MER7A DNA MER2_type 1 346 0 2448 46 0 3 chr2 33690358 33690640 -216997214 - AluY SINE Alu 0 311 31 1830 145 34 30 chr2 33691169 33691465 -216996389 + AluJb SINE Alu 1 297 -15 605 222 99 12 chr2 33692249 33692411 -216995443 + FRAM SINE Alu 1 176 0 2204 112 0 10 chr2 33692909 33693205 -216994649 + AluSx SINE Alu 3 295 -17 265 254 151 0 chr2 33693410 33693536 -216994318 - MER113 DNA MER1_type? -345 176 32 264 252 89 59 chr2 33693621 33693756 -216994098 - MER5B DNA MER1_type -29 149 11 365 242 43 75 chr2 33695318 33695479 -216992375 - MARNA DNA Mariner -355 231 76 213 178 0 0 chr2 33697264 33697309 -216990545 + (TGGA)n Simple_repeat Simple_repeat 4 48 0 23 0 0 0 chr2 33697663 33697686 -216990168 + AT_rich Low_complexity Low_complexity 1 23 0 383 121 0 0 chr2 33697923 33697981 -216989873 + Alu SINE Alu 245 302 0 206 227 0 0 chr2 33698209 33698253 -216989601 - MIR SINE MIR -1 261 218 2506 72 0 7 chr2 33698548 33698853 -216989001 + AluSq SINE Alu 1 303 -10 222 37 0 0 chr2 33698853 33698880 -216988974 + (TA)n Simple_repeat Simple_repeat 2 28 0 948 78 78 0 chr2 33699940 33700069 -216987785 + MER85 DNA T2_type 1 139 0 210 313 76 23 chr2 33700850 33700981 -216986873 + MIR SINE MIR 75 212 -50 303 282 84 15 chr2 33701337 33701468 -216986386 + MIR3 SINE MIR 2 141 -67 195 100 0 0 chr2 33701850 33701880 -216985974 + (TC)n Simple_repeat Simple_repeat 2 31 0 315 0 0 0 chr2 33701880 33701915 -216985939 + (CA)n Simple_repeat Simple_repeat 1 35 0 401 221 76 19 chr2 33702036 33702194 -216985660 - L1ME4a LINE L1 -11 6110 5944 1816 249 97 14 chr2 33702256 33702770 -216985084 - MER115 DNA AcHobo 0 693 137 336 24 0 0 chr2 33703064 33703105 -216984749 + (TG)n Simple_repeat Simple_repeat 2 42 0 386 141 16 0 chr2 33703137 33703201 -216984653 - MER20 DNA MER1_type -11 208 144 1707 103 0 5 chr2 33703201 33703468 -216984386 - AluSc SINE Alu 0 323 58 283 182 0 0 chr2 33703489 33703533 -216984321 - MER20 DNA MER1_type -172 47 4 621 221 91 20 chr2 33703534 33703788 -216984066 + L1ME3A LINE L1 961 1232 -4887 602 218 39 57 chr2 33703866 33703973 -216983881 + L1ME3A LINE L1 4356 4463 -1666 391 141 26 13 chr2 33703973 33704051 -216983803 + L1MA5A LINE L1 6219 6297 0 602 218 39 57 chr2 33704051 33704223 -216983631 + L1ME3A LINE L1 4463 4630 -1499 5970 161 30 7 chr2 33704244 33706139 -216981715 + L1PA14 LINE L1 4222 6158 -3 1604 243 68 58 chr2 33706171 33706808 -216981046 + L1ME3A LINE L1 5303 5945 -208 1720 78 9 0 chr2 33708499 33708718 -216979136 - AluSp SINE Alu -1 312 92 1442 250 103 53 chr2 33708813 33709378 -216978476 + MLT1E LTR MaLR 1 593 0 1674 130 31 0 chr2 33710277 33710538 -216977316 + MSTB1 LTR MaLR 1 269 -163 913 132 0 15 chr2 33710538 33710674 -216977180 - FLAM_C SINE Alu -9 134 1 1156 139 0 6 chr2 33710674 33710846 -216977008 + MSTB1 LTR MaLR 262 432 0 252 206 15 29 chr2 33710846 33710914 -216976940 - MER103 DNA DNA -46 120 54 279 280 60 30 chr2 33711356 33711456 -216976398 - L2 LINE L2 -1 3312 3210 23 33 0 0 chr2 33711666 33711696 -216976158 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 33711878 33711906 -216975948 + AT_rich Low_complexity Low_complexity 1 28 0 298 248 111 20 chr2 33712217 33712370 -216975484 + MIR SINE MIR 20 186 -76 194 135 0 27 chr2 33713544 33713581 -216974273 + MER5B DNA MER1_type 18 53 -125 * 211 169 195 26 chr2 33713548 33713625 -216974229 - MER5A DNA MER1_type -21 168 79 956 238 19 0 chr2 33713754 33713960 -216973894 - MER63A DNA MER1_type 0 210 1 355 113 19 0 chr2 33715610 33715663 -216972191 + MER5A DNA MER1_type 14 67 -122 241 336 69 0 chr2 33715908 33716024 -216971830 + MIR SINE MIR 28 151 -111 714 248 48 17 chr2 33716039 33716269 -216971585 - MIR SINE MIR -18 244 8 1743 54 0 5 chr2 33716533 33716738 -216971116 - AluY SINE Alu -18 293 90 1853 116 55 68 chr2 33716741 33717121 -216970733 + THE1C LTR MaLR 1 375 0 219 167 21 21 chr2 33718035 33718083 -216969771 + (CCCCG)n Simple_repeat Simple_repeat 5 52 0 196 348 29 22 chr2 33718950 33719088 -216968766 + L3b LINE CR1 1165 1303 -280 2244 118 48 25 chr2 33719392 33719748 -216968106 + THE1B LTR MaLR 1 364 0 11153 78 17 72 chr2 33719748 33720129 -216967725 + THE1B-int LTR MaLR 1 401 -1179 606 117 0 0 chr2 33720129 33720223 -216967631 - AluSc SINE Alu -1 308 215 11153 78 17 72 chr2 33720223 33721420 -216966434 + THE1B-int LTR MaLR 401 1580 0 2316 110 48 25 chr2 33721420 33721776 -216966078 + THE1B LTR MaLR 1 364 0 2989 90 27 25 chr2 33722210 33722253 -216965601 - MLT2A1 LTR ERVL 0 444 403 609 100 0 0 chr2 33722253 33722343 -216965511 + (TA)n Simple_repeat Simple_repeat 2 91 0 2989 90 27 25 chr2 33722343 33722742 -216965112 - MLT2A1 LTR ERVL -41 403 1 2605 102 14 6 chr2 33723376 33723737 -216964117 + THE1B LTR MaLR 1 364 0 992 296 65 12 chr2 33723903 33724305 -216963549 + LTR16A LTR ERVL 1 423 -27 237 178 32 185 chr2 33724502 33724659 -216963195 - MLT1K LTR MaLR -2 586 454 1123 228 95 58 chr2 33724973 33725007 -216962847 - MLT2B1 LTR ERVL -6 514 483 216 0 0 0 chr2 33725007 33725031 -216962823 + (TG)n Simple_repeat Simple_repeat 2 25 0 1123 228 95 58 chr2 33725031 33725321 -216962533 - MLT2B1 LTR ERVL -37 483 178 850 225 38 0 chr2 33725353 33725566 -216962288 + L1M4 LINE L1 2572 2792 -3354 238 200 144 67 chr2 33725566 33725656 -216962198 - MLT1F LTR MaLR -443 99 3 2118 118 24 0 chr2 33727593 33727880 -216959974 - AluSx SINE Alu -18 294 1 225 179 0 0 chr2 33728181 33728220 -216959634 + MARNA DNA Mariner 199 237 -349 1830 110 26 71 chr2 33728483 33728793 -216959061 + AluSg SINE Alu 1 296 -14 297 241 11 11 chr2 33728993 33729080 -216958774 - ALR/Alpha Satellite centromeric -16 156 70 441 206 169 38 chr2 33730013 33730173 -216957681 - MER5A DNA MER1_type 0 189 9 243 262 49 0 chr2 33731274 33731335 -216956519 + MIR SINE MIR 28 91 -171 546 336 20 25 chr2 33731340 33731584 -216956270 + MIR SINE MIR 18 260 -2 506 241 89 35 chr2 33732561 33732764 -216955090 - L1ME3A LINE L1 -169 6001 5788 679 233 93 28 chr2 33732934 33733149 -216954705 + MIR SINE MIR 34 262 0 255 314 16 47 chr2 33733215 33733406 -216954448 + L2 LINE L2 2879 3063 -209 48 18 0 0 chr2 33733475 33733530 -216954324 + AT_rich Low_complexity Low_complexity 1 55 0 499 196 59 0 chr2 33733639 33733741 -216954113 + Charlie1a DNA MER1_type 93 200 -1255 555 99 0 12 chr2 33733743 33733824 -216954030 + AluSx SINE Alu 2 81 -231 733 95 0 0 chr2 33733824 33733919 -216953935 - LTR12 LTR ERV1 -8 706 612 323 191 34 22 chr2 33733919 33734008 -216953846 - LTR30 LTR ERV1 -80 642 553 1667 84 0 68 chr2 33734009 33734259 -216953595 - LTR12 LTR ERV1 -429 285 53 270 231 0 0 chr2 33734259 33734311 -216953543 - LTR30 LTR ERV1 -670 52 1 1747 116 0 4 chr2 33734311 33734553 -216953301 + AluSx SINE Alu 69 309 -1 2515 199 40 31 chr2 33734556 33735103 -216952751 + Charlie1a DNA MER1_type 192 743 -712 5191 138 40 60 chr2 33735150 33735853 -216952001 - L1MA7 LINE L1 -14 6277 5561 712 186 0 24 chr2 33735853 33735977 -216951877 + FLAM_A SINE Alu 1 121 -12 5191 138 40 60 chr2 33735977 33736309 -216951545 - L1MA7 LINE L1 -730 5561 5274 1691 181 20 13 chr2 33736309 33736613 -216951241 - AluJo SINE Alu -6 306 1 5191 138 40 60 chr2 33736613 33736808 -216951046 - L1MA7 LINE L1 -1017 5274 5077 2266 83 0 4 chr2 33737222 33737500 -216950354 + AluSc SINE Alu 1 277 -32 204 67 0 0 chr2 33737500 33737530 -216950324 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 696 231 24 52 chr2 33737864 33738102 -216949752 - L1MD3 LINE L1 -1 7994 6024 414 39 0 0 chr2 33738121 33738173 -216949681 + (TG)n Simple_repeat Simple_repeat 1 52 0 2159 104 4 0 chr2 33738173 33738451 -216949403 - AluSx SINE Alu -33 279 1 332 279 58 0 chr2 33738628 33738732 -216949122 + MIR SINE MIR 80 189 -73 982 287 102 18 chr2 33738783 33739201 -216948653 - LTR16A LTR ERVL 0 450 1 1843 170 7 0 chr2 33740130 33740418 -216947436 + AluJo SINE Alu 1 290 -22 464 291 108 24 chr2 33741017 33741230 -216946624 + MIR SINE MIR 32 262 0 1789 190 46 3 chr2 33741416 33741805 -216946049 + L1 LINE L1 4114 4519 -1627 387 0 0 0 chr2 33741805 33741848 -216946006 + (TCTCCC)n Simple_repeat Simple_repeat 6 48 0 309 298 32 0 chr2 33741857 33741981 -216945873 - L1M4 LINE L1 -2946 3200 3073 309 305 25 0 chr2 33741952 33742070 -216945784 - L1M4 LINE L1 -2953 3193 3073 1242 100 0 0 chr2 33742082 33742262 -216945592 + (T)n Simple_repeat Simple_repeat 1 180 0 7159 64 11 62 chr2 33743264 33745689 -216942165 + SVA Other Other 373 1386 0 5556 109 41 18 chr2 33745689 33746652 -216941202 + L1PA16 LINE L1 4508 5507 -659 2371 96 3 13 chr2 33746652 33746965 -216940889 + AluSx SINE Alu 1 310 -2 5556 109 41 18 chr2 33746965 33747632 -216940222 + L1PA16 LINE L1 5507 6157 -9 2276 94 0 0 chr2 33747650 33747938 -216939916 - AluSx SINE Alu -24 288 1 25 0 0 0 chr2 33748011 33748036 -216939818 + AT_rich Low_complexity Low_complexity 1 25 0 1667 202 104 60 chr2 33748185 33748329 -216939525 + MER114 LTR ERV 19 155 -493 2371 70 0 3 chr2 33748329 33748656 -216939198 + AluY SINE Alu 1 326 0 1667 202 104 60 chr2 33748656 33749005 -216938849 + MER114 LTR ERV 155 544 -104 802 226 0 63 chr2 33749005 33749114 -216938740 + MER45A DNA AcHobo 1 95 -1486 2075 131 0 0 chr2 33749114 33749405 -216938449 - AluSx SINE Alu -16 296 6 802 226 0 63 chr2 33749405 33749485 -216938369 + MER45A DNA AcHobo 95 178 0 1667 202 104 60 chr2 33749485 33749554 -216938300 + MER114 LTR ERV 544 608 -40 3568 90 45 4 chr2 33749583 33750072 -216937782 - MER75 DNA T2_type -5 509 1 2371 196 57 75 chr2 33750624 33750834 -216937020 + L1MA9 LINE L1 5455 5667 -636 2353 113 3 0 chr2 33750834 33751145 -216936709 + AluSx SINE Alu 1 312 0 2371 196 57 75 chr2 33751145 33751800 -216936054 + L1MA9 LINE L1 5667 6277 -26 693 138 41 0 chr2 33754242 33754365 -216933489 - L1MB4 LINE L1 0 6180 6053 6171 44 3 0 chr2 33754837 33755582 -216932272 + L1PA5 LINE L1 5401 6147 -7 2208 145 0 0 chr2 33755824 33756135 -216931719 - AluSx SINE Alu -1 311 1 2020 112 3 75 chr2 33756722 33757044 -216930810 - AluSx SINE Alu -13 299 1 379 241 74 18 chr2 33758512 33758715 -216929139 - MLT1L LTR MaLR 0 615 367 954 136 0 0 chr2 33759168 33759308 -216928546 - AluJ SINE Alu -15 297 158 636 135 58 0 chr2 33759309 33759413 -216928441 - AluJ SINE Alu -201 111 2 856 209 0 12 chr2 33759414 33759577 -216928277 - FRAM SINE Alu -2 164 4 382 305 8 0 chr2 33759593 33759711 -216928143 + L2 LINE L2 3195 3313 0 934 203 50 0 chr2 33759766 33759809 -216928045 + MIR SINE MIR 48 87 -175 1777 148 0 43 chr2 33759809 33760135 -216927719 - AluJb SINE Alu 0 312 1 934 203 50 0 chr2 33760135 33760293 -216927561 + MIR SINE MIR 87 259 -3 323 167 143 0 chr2 33760316 33760400 -216927454 + MIR SINE MIR 97 192 -70 237 292 69 56 chr2 33760526 33760670 -216927184 - MIR SINE MIR -75 187 42 4852 105 52 64 chr2 33760815 33761646 -216926208 - LTR12 LTR ERV1 -1 825 5 2494 192 37 24 chr2 33761661 33762256 -216925598 - pTR5 LTR ERV1 -1093 1345 743 5501 150 99 78 chr2 33762324 33762910 -216924944 + L1MC3 LINE L1 6494 7066 -719 252 263 38 12 chr2 33762910 33762990 -216924864 + MLT1F1 LTR MaLR 35 116 -451 5501 150 99 78 chr2 33762990 33763581 -216924273 + L1MC3 LINE L1 7066 7776 -9 1402 183 76 64 chr2 33763617 33763780 -216924074 + L1MEc LINE L1 2162 2321 -3894 2329 114 0 9 chr2 33763780 33764095 -216923759 + AluSx SINE Alu 1 312 0 1402 183 76 64 chr2 33764095 33764493 -216923361 + L1MEc LINE L1 2321 2687 -3528 1636 228 45 91 chr2 33764526 33765339 -216922515 - L1MEc LINE L1 -4050 2346 1575 1949 126 16 38 chr2 33765339 33765656 -216922198 + AluSx SINE Alu 1 310 -2 1636 228 45 91 chr2 33765656 33765718 -216922136 - L1MEc LINE L1 -4821 1575 1512 1499 155 41 48 chr2 33765780 33766071 -216921783 - AluJb SINE Alu 0 312 24 347 284 71 15 chr2 33766074 33766271 -216921583 - L1MEc LINE L1 -5098 1298 1091 4616 115 18 40 chr2 33766700 33767466 -216920388 + L1MA9 LINE L1 5559 6307 -5 401 222 0 0 chr2 33767799 33767880 -216919974 - MARNA DNA Mariner -16 570 490 326 333 63 0 chr2 33767898 33768057 -216919797 + MER117 DNA MER1_type 29 197 0 246 287 139 0 chr2 33768060 33768161 -216919693 + MIR SINE MIR 12 126 -136 247 263 62 25 chr2 33768261 33768341 -216919513 + MARNA DNA Mariner 84 166 -420 2347 171 9 119 chr2 33768389 33768968 -216918886 + MLT2B2 LTR ERVL 1 515 0 866 263 29 29 chr2 33768978 33769286 -216918568 + MARNA DNA Mariner 262 569 -17 1705 149 22 53 chr2 33769601 33769923 -216917931 + AluJo SINE Alu 1 312 0 388 308 105 0 chr2 33770084 33770217 -216917637 + MER115 DNA AcHobo 1 147 -546 1308 189 117 7 chr2 33770218 33770740 -216917114 + MLT1E1 LTR MaLR 1 638 -16 303 219 73 0 chr2 33770789 33770871 -216916983 + MER5C DNA MER1_type 37 124 -200 21 0 0 0 chr2 33770877 33770898 -216916956 + AT_rich Low_complexity Low_complexity 1 21 0 1475 281 29 56 chr2 33770963 33771515 -216916339 + MER115 DNA AcHobo 157 693 0 1390 157 73 76 chr2 33771722 33772193 -216915661 + MSTD LTR MaLR 15 396 0 2078 206 34 26 chr2 33772314 33772815 -216915039 + MLT1D LTR MaLR 1 505 0 210 322 66 44 chr2 33774322 33774505 -216913349 - MIR SINE MIR -70 192 6 29 0 0 0 chr2 33774747 33774776 -216913078 + AT_rich Low_complexity Low_complexity 1 29 0 1914 138 14 0 chr2 33774776 33775059 -216912795 - AluJb SINE Alu -25 287 1 817 146 110 12 chr2 33775067 33775231 -216912623 - L1MA2 LINE L1 0 6304 6125 315 223 50 0 chr2 33776616 33776722 -216911132 - MIR SINE MIR -66 196 85 392 328 16 0 chr2 33777192 33777320 -216910534 - MIR SINE MIR -126 136 7 561 255 25 12 chr2 33777442 33777603 -216910251 - MIR SINE MIR -70 192 30 627 198 0 0 chr2 33777606 33777717 -216910137 + FLAM_A SINE Alu 21 131 -11 517 103 10 31 chr2 33777717 33777814 -216910040 - Charlie5 DNA MER1_type -112 2500 2406 * 1191 184 40 32 chr2 33777813 33778063 -216909791 - Charlie5 DNA MER1_type -2346 266 15 2231 111 0 25 chr2 33778673 33778811 -216909043 + AluSg SINE Alu 1 141 -169 2207 95 0 48 chr2 33778811 33779127 -216908727 + AluSp SINE Alu 1 301 -12 2231 111 0 25 chr2 33779127 33779303 -216908551 + AluSg SINE Alu 141 307 -3 417 86 0 0 chr2 33780861 33780919 -216906935 + (GA)n Simple_repeat Simple_repeat 1 58 0 3201 178 31 12 chr2 33781101 33781507 -216906347 + L1M4 LINE L1 4668 5065 -1113 2084 142 0 0 chr2 33781507 33781810 -216906044 - AluSx SINE Alu -9 303 1 3201 178 31 12 chr2 33781810 33782533 -216905321 + L1M4 LINE L1 5065 5822 -356 1191 170 97 76 chr2 33782534 33782823 -216905031 - AluJb SINE Alu -7 295 1 1754 143 18 122 chr2 33782824 33782964 -216904890 - L1MB5 LINE L1 -137 6037 5884 207 114 0 0 chr2 33782964 33782999 -216904855 + (TG)n Simple_repeat Simple_repeat 2 36 0 1754 143 18 122 chr2 33782999 33783133 -216904721 - L1MB5 LINE L1 -290 5884 5822 450 0 0 0 chr2 33783133 33783183 -216904671 + (TA)n Simple_repeat Simple_repeat 2 51 0 1754 143 18 122 chr2 33783183 33783342 -216904512 - L1MB5 LINE L1 -352 5822 5648 237 311 67 43 chr2 33783456 33783620 -216904234 - MIR3 SINE MIR -2 206 39 228 227 125 0 chr2 33783856 33783944 -216903910 - MER102b DNA MER1_type -1 340 242 2146 134 0 0 chr2 33785109 33785408 -216902446 - AluSx SINE Alu -13 299 1 339 25 0 0 chr2 33786994 33787034 -216900820 + (TG)n Simple_repeat Simple_repeat 1 40 0 529 14 29 0 chr2 33787034 33787104 -216900750 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 2288 96 0 43 chr2 33787197 33787398 -216900456 + AluSx SINE Alu 1 184 -128 2525 68 3 0 chr2 33787398 33787693 -216900161 - AluY SINE Alu -15 296 1 2288 96 0 43 chr2 33787693 33787815 -216900039 + AluSx SINE Alu 184 310 -2 967 292 80 41 chr2 33788030 33788159 -216899695 + L2 LINE L2 2460 2583 -730 2240 144 55 0 chr2 33788159 33788506 -216899348 - MER47A DNA MER2_type 0 366 1 967 292 80 41 chr2 33788506 33788953 -216898901 + L2 LINE L2 2583 3084 -229 2312 116 0 0 chr2 33788953 33789263 -216898591 - AluSq SINE Alu -3 310 1 967 292 80 41 chr2 33789263 33789502 -216898352 + L2 LINE L2 3084 3312 -1 244 323 40 91 chr2 33789507 33789664 -216898190 - L3 LINE CR1 -193 1384 1247 2239 100 0 23 chr2 33789664 33789965 -216897889 - AluSq SINE Alu -19 294 1 244 323 40 91 chr2 33789965 33790104 -216897750 - L3 LINE CR1 -330 1247 1103 180 0 0 0 chr2 33790107 33790127 -216897727 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2550 63 0 3 chr2 33790149 33790451 -216897403 + AluY SINE Alu 7 307 -4 317 330 18 9 chr2 33790608 33790717 -216897137 - L3 LINE CR1 -1432 145 36 30 0 0 0 chr2 33790725 33790755 -216897099 + AT_rich Low_complexity Low_complexity 1 30 0 848 163 26 18 chr2 33790930 33791317 -216896537 + CT-rich Low_complexity Low_complexity 1 390 0 1536 39 0 0 chr2 33791348 33791759 -216896095 + (G)n Simple_repeat Simple_repeat 1 411 0 22 0 0 0 chr2 33792794 33792816 -216895038 + AT_rich Low_complexity Low_complexity 1 22 0 227 286 7 38 chr2 33792849 33793050 -216894804 + A-rich Low_complexity Low_complexity 1 194 0 214 261 7 42 chr2 33793245 33793387 -216894467 + A-rich Low_complexity Low_complexity 2 138 0 267 300 0 0 chr2 33793429 33793529 -216894325 + A-rich Low_complexity Low_complexity 1 100 0 2266 89 3 3 chr2 33794663 33794954 -216892900 + AluSg SINE Alu 1 291 -19 2299 93 0 13 chr2 33794966 33795268 -216892586 - AluSx SINE Alu -14 298 1 248 333 133 7 chr2 33796082 33796217 -216891637 + MIR SINE MIR 2 153 -109 2085 103 20 33 chr2 33796350 33796652 -216891202 - AluSq SINE Alu -15 298 1 2118 141 7 0 chr2 33796653 33796959 -216890895 - AluSx SINE Alu -4 308 1 450 310 47 43 chr2 33797082 33797193 -216890661 + MIR SINE MIR 30 139 -123 2350 102 76 12 chr2 33797193 33797535 -216890319 - THE1B LTR MaLR 0 364 1 450 310 47 43 chr2 33797535 33797655 -216890199 + MIR SINE MIR 139 262 0 1005 82 0 0 chr2 33799068 33799190 -216888664 + AluSp SINE Alu 11 132 -181 2171 115 24 0 chr2 33799192 33799488 -216888366 + AluSp SINE Alu 1 303 -10 2298 121 0 10 chr2 33800059 33800373 -216887481 + AluSx SINE Alu 1 311 -1 994 216 28 18 chr2 33801301 33801519 -216886335 + MER58A DNA MER1_type 1 220 -4 212 270 61 61 chr2 33802340 33802536 -216885318 - L2 LINE L2 -188 3084 2889 205 268 54 0 chr2 33802541 33802597 -216885257 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 220 289 141 33 chr2 33803325 33803446 -216884408 - L2 LINE L2 0 3272 3139 2064 126 7 7 chr2 33803664 33803966 -216883888 + AluSx SINE Alu 1 302 -10 545 213 192 25 chr2 33804283 33804523 -216883331 - L1ME4a LINE L1 -4 6117 5838 305 268 101 18 chr2 33805148 33805316 -216882538 - L1MDa LINE L1 -3855 2685 2504 264 59 0 0 chr2 33805579 33805613 -216882241 + (CA)n Simple_repeat Simple_repeat 1 34 0 270 275 147 32 chr2 33805843 33806152 -216881702 - L1MDa LINE L1 -800 2101 1663 21 71 0 0 chr2 33806478 33806520 -216881334 + AT_rich Low_complexity Low_complexity 1 42 0 953 237 5 0 chr2 33806530 33806716 -216881138 + MER58A DNA MER1_type 34 220 -4 979 269 114 82 chr2 33806726 33807495 -216880359 - L1MDa LINE L1 -5314 1216 423 262 254 0 0 chr2 33807612 33807675 -216880179 + MIR SINE MIR 17 79 -183 1072 194 51 32 chr2 33807688 33807729 -216880125 - MER58A DNA MER1_type -2199 221 182 1606 173 77 12 chr2 33807729 33808052 -216879802 + MER2 DNA MER2_type 1 344 0 1072 194 51 32 chr2 33808052 33808227 -216879627 - MER58A DNA MER1_type -2238 182 1 352 190 50 33 chr2 33808228 33808332 -216879522 + MIR SINE MIR 89 197 -65 3770 154 26 5 chr2 33808332 33808954 -216878900 + MER41B LTR ERV1 1 635 0 352 190 50 33 chr2 33808954 33808970 -216878884 + MIR SINE MIR 197 211 -51 830 242 62 29 chr2 33809128 33809401 -216878453 - MLT1I LTR MaLR -25 384 103 673 268 38 11 chr2 33809417 33809758 -216878096 + LTR16A LTR ERVL 52 440 -10 306 266 43 11 chr2 33809890 33809984 -216877870 - MIR SINE MIR -1 261 165 792 210 7 0 chr2 33810043 33810186 -216877668 + MER58B DNA MER1_type 198 341 0 3041 112 64 43 chr2 33810277 33810467 -216877387 + MER4D LTR ERV1 1 186 -593 2052 125 3 7 chr2 33810467 33810764 -216877090 + AluSp SINE Alu 1 296 -17 3041 112 64 43 chr2 33810764 33811342 -216876512 + MER4D LTR ERV1 186 779 0 249 304 0 0 chr2 33812042 33812098 -216875756 - MIR SINE MIR -192 70 15 1704 136 99 7 chr2 33812338 33812611 -216875243 - AluJb SINE Alu -12 300 3 903 139 0 0 chr2 33812615 33812752 -216875102 - L1PB4 LINE L1 -1 6155 6019 216 218 18 0 chr2 33812799 33812854 -216875000 + (TGAA)n Simple_repeat Simple_repeat 2 57 0 203 276 195 11 chr2 33812970 33813057 -216874797 - L2 LINE L2 -2 3270 3168 546 28 83 0 chr2 33814196 33814268 -216873586 - MADE1 DNA Mariner -2 78 1 2128 116 0 0 chr2 33814642 33814926 -216872928 + AluSx SINE Alu 1 284 -28 638 66 66 0 chr2 33814926 33815078 -216872776 + (TA)n Simple_repeat Simple_repeat 1 162 0 2457 72 0 0 chr2 33815859 33816149 -216871705 - AluSg SINE Alu -20 290 1 2105 103 0 48 chr2 33816703 33817013 -216870841 - AluSx SINE Alu -17 295 1 230 259 34 13 chr2 33817345 33817586 -216870268 + CT-rich Low_complexity Low_complexity 1 246 0 2220 125 3 6 chr2 33818467 33818779 -216869075 - AluSx SINE Alu -1 311 1 919 129 15 0 chr2 33818780 33818912 -216868942 - AluSq/x SINE Alu -179 134 1 237 33 0 0 chr2 33818924 33818954 -216868900 + (T)n Simple_repeat Simple_repeat 1 30 0 304 298 10 0 chr2 33819194 33819247 -216868607 - MIR SINE MIR -79 129 78 2532 75 53 8 chr2 33819247 33819606 -216868248 + THE1C LTR MaLR 1 375 0 304 298 10 0 chr2 33819606 33819656 -216868198 - MIR SINE MIR -130 78 25 770 126 0 0 chr2 33820318 33820429 -216867425 - HY1 scRNA scRNA -1 111 1 398 296 85 0 chr2 33820539 33820715 -216867139 - MIR3 SINE MIR -3 205 15 212 235 0 47 chr2 33822019 33822104 -216865750 + C-rich Low_complexity Low_complexity 2 82 0 21 89 0 0 chr2 33822246 33822302 -216865552 + GC_rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 33822599 33822620 -216865234 + (CCG)n Simple_repeat Simple_repeat 1 21 0 216 125 0 42 chr2 33822800 33822848 -216865006 + (CCCG)n Simple_repeat Simple_repeat 4 49 0 666 198 87 52 chr2 33825236 33825252 -216862602 + AluSg/x SINE Alu 120 134 -178 2251 103 13 7 chr2 33825252 33825552 -216862302 + AluSx SINE Alu 1 302 -10 666 198 87 52 chr2 33825552 33825707 -216862147 + AluSg/x SINE Alu 134 297 -15 373 272 40 39 chr2 33826496 33826689 -216861165 + MIR SINE MIR 2 191 -71 1749 163 2 101 chr2 33829247 33829671 -216858183 - MLT1B LTR MaLR -6 384 3 230 271 239 32 chr2 33829962 33830117 -216857737 - MER5A DNA MER1_type -2 187 1 23 54 0 0 chr2 33830457 33830494 -216857360 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr2 33830605 33830635 -216857219 + AT_rich Low_complexity Low_complexity 1 30 0 8847 117 41 6 chr2 33830873 33832208 -216855646 - Tigger1 DNA MER2_type 0 2418 1037 3932 137 32 2 chr2 33832206 33832797 -216855057 - Tigger1 DNA MER2_type -1809 609 1 * 335 316 22 61 chr2 33833049 33833280 -216854574 + MIR SINE MIR 2 223 -39 237 196 0 0 chr2 33834531 33834582 -216853272 + (TG)n Simple_repeat Simple_repeat 1 51 0 2240 121 0 0 chr2 33834598 33834903 -216852951 - AluSx SINE Alu -3 309 5 209 302 43 60 chr2 33835103 33835219 -216852635 + MIR SINE MIR 67 180 -82 204 182 0 73 chr2 33835276 33835331 -216852523 + L2 LINE L2 3171 3221 -92 303 28 0 0 chr2 33835385 33835421 -216852433 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 320 330 147 13 chr2 33835616 33835922 -216851932 - L2 LINE L2 -181 3132 2783 3954 87 4 8 chr2 33836387 33836903 -216850951 + THE1B-int LTR MaLR 1067 1580 0 331 89 0 0 chr2 33836903 33836948 -216850906 + THE1B LTR MaLR 1 45 -319 3411 127 12 14 chr2 33837212 33837724 -216850130 + MER9 LTR ERVK 1 511 0 1122 245 61 32 chr2 33838697 33839170 -216848684 + L1M4 LINE L1 3268 3754 -2392 1695 101 4 0 chr2 33839170 33839398 -216848456 + AluSq SINE Alu 1 229 -84 233 214 54 36 chr2 33839986 33840042 -216847812 - MER2 DNA MER2_type -3 342 286 486 0 0 0 chr2 33840077 33840131 -216847723 + (TA)n Simple_repeat Simple_repeat 1 54 0 3079 12 0 0 chr2 33841236 33841574 -216846280 - L1PA2 LINE L1 -376 5779 5442 2983 12 9 3 chr2 33841567 33841907 -216845947 + L1PA2 LINE L1 5794 6135 -20 * 1040 172 82 43 chr2 33842007 33842263 -216845591 - Tigger1 DNA MER2_type -2152 266 1 716 253 62 80 chr2 33842273 33842337 -216845517 - L1MC5 LINE L1 -204 7757 7693 2095 99 17 13 chr2 33842337 33842639 -216845215 + AluSx SINE Alu 2 304 -8 716 253 62 80 chr2 33842639 33842723 -216845131 - L1MC5 LINE L1 -268 7693 7609 2253 150 84 11 chr2 33842723 33843090 -216844764 + MSTD LTR MaLR 3 396 0 716 253 62 80 chr2 33843090 33843520 -216844334 - L1MC5 LINE L1 -352 7609 7246 1164 144 6 6 chr2 33845731 33845912 -216841942 - AluSq SINE Alu -12 301 121 12520 131 36 17 chr2 33846089 33846174 -216841680 + Tigger1 DNA MER2_type 387 469 -1949 2166 78 3 7 chr2 33846174 33846487 -216841367 - AluY SINE Alu 0 312 1 12520 131 36 17 chr2 33846487 33848393 -216839461 + Tigger1 DNA MER2_type 469 2418 0 10668 31 0 0 chr2 33850333 33851609 -216836245 - L1P LINE L1 -2228 3918 2643 * 11082 27 0 0 chr2 33851605 33852882 -216834972 + L1P LINE L1 3919 5195 -951 214 213 0 21 chr2 33853475 33853522 -216834332 + T-rich Low_complexity Low_complexity 4 49 0 626 275 23 18 chr2 33855092 33855263 -216832591 + MIR3 SINE MIR 30 201 -7 955 192 88 26 chr2 33856197 33856390 -216831464 - MER58A DNA MER1_type -3 221 17 288 0 0 0 chr2 33856499 33856531 -216831323 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 245 314 66 36 chr2 33856558 33856695 -216831159 - MIR3 SINE MIR -65 143 3 2875 7 0 0 chr2 33857653 33857962 -216829892 - AluY SINE Alu -2 309 1 30 0 0 0 chr2 33859444 33859474 -216828380 + AT_rich Low_complexity Low_complexity 1 30 0 2321 82 17 3 chr2 33859474 33859768 -216828086 - AluSq SINE Alu -15 298 1 405 223 96 0 chr2 33859828 33859922 -216827932 - L2 LINE L2 -2 3311 3209 717 130 73 0 chr2 33859946 33860069 -216827785 + L1MB2 LINE L1 5839 5970 -201 1611 165 8 0 chr2 33860187 33860453 -216827401 - L1M3 LINE L1 -437 5743 5476 3034 125 31 4 chr2 33860494 33860848 -216827006 - L1PB1 LINE L1 -2 6149 5779 495 0 0 0 chr2 33860848 33860903 -216826951 + (TG)n Simple_repeat Simple_repeat 2 56 0 3034 125 31 4 chr2 33860903 33861003 -216826851 - L1PB1 LINE L1 -372 5779 5683 3233 124 8 2 chr2 33861004 33861635 -216826219 + L1PB1 LINE L1 5053 5686 -465 984 116 30 50 chr2 33861630 33861829 -216826025 - L1M3 LINE L1 -689 5491 5297 * 385 263 147 39 chr2 33861899 33862055 -216825799 + MIR3 SINE MIR 31 203 -5 469 233 81 18 chr2 33862924 33863199 -216824655 + LTR33 LTR ERVL 154 520 -1 708 280 107 36 chr2 33863477 33863803 -216824051 - L1MC4a LINE L1 -1894 5914 5553 1873 157 0 0 chr2 33863803 33864104 -216823750 + AluSx SINE Alu 1 301 0 708 280 107 36 chr2 33864104 33864169 -216823685 - L1MC4a LINE L1 -2255 5553 5494 195 42 0 0 chr2 33864172 33864196 -216823658 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1198 118 0 24 chr2 33864220 33864390 -216823464 - AluSg SINE Alu -144 166 1 734 192 51 6 chr2 33864497 33864653 -216823201 - MER20 DNA MER1_type 0 219 57 21 0 0 0 chr2 33864799 33864820 -216823034 + AT_rich Low_complexity Low_complexity 1 21 0 655 248 38 17 chr2 33865052 33865288 -216822566 - MIR SINE MIR 0 262 22 345 145 65 0 chr2 33865518 33865580 -216822274 + MIR SINE MIR 126 191 -71 555 228 83 21 chr2 33866477 33866622 -216821232 - MIR3 SINE MIR -21 187 34 2166 121 20 3 chr2 33866883 33867189 -216820665 + AluSq SINE Alu 1 311 -2 260 267 0 0 chr2 33868815 33868875 -216818979 - MIR SINE MIR -12 250 191 22 56 0 0 chr2 33869054 33869090 -216818764 + AT_rich Low_complexity Low_complexity 1 36 0 2274 108 0 3 chr2 33869184 33869479 -216818375 + AluSx SINE Alu 1 294 -18 236 370 22 29 chr2 33870004 33870142 -216817712 + MIR SINE MIR 120 256 -6 2296 215 63 47 chr2 33870565 33870607 -216817247 - MLT1F1 LTR MaLR 0 567 527 2339 82 3 0 chr2 33870607 33870901 -216816953 + AluSg SINE Alu 1 295 -15 2296 215 63 47 chr2 33870901 33871293 -216816561 - MLT1F1 LTR MaLR -40 527 120 823 180 8 0 chr2 33871293 33871421 -216816433 - FLAM_C SINE Alu -2 131 3 2296 215 63 47 chr2 33871421 33871543 -216816311 - MLT1F1 LTR MaLR -447 120 1 22 35 0 0 chr2 33876766 33876795 -216811059 + AT_rich Low_complexity Low_complexity 1 29 0 726 182 29 53 chr2 33877460 33877630 -216810224 + MER58B DNA MER1_type 173 338 -3 978 245 94 18 chr2 33877928 33878214 -216809640 + L3 LINE CR1 1257 1564 -13 845 209 0 0 chr2 33878682 33878821 -216809033 - MER58A DNA MER1_type 0 139 1 203 265 147 59 chr2 33878821 33878957 -216808897 - MIR3 SINE MIR -13 195 48 9883 22 5 1 chr2 33879300 33881158 -216806696 + L1PA3 LINE L1 4292 6152 -3 21 57 0 0 chr2 33881158 33881193 -216806661 + AT_rich Low_complexity Low_complexity 1 35 0 2279 85 3 0 chr2 33881223 33881517 -216806337 - AluY SINE Alu -16 295 1 21 0 0 0 chr2 33881526 33881547 -216806307 + AT_rich Low_complexity Low_complexity 1 21 0 828 282 45 20 chr2 33881901 33882146 -216805708 - MIR SINE MIR -4 258 8 219 224 164 0 chr2 33882203 33882270 -216805584 + L2 LINE L2 3188 3265 -7 255 251 90 90 chr2 33882272 33882360 -216805494 + L1ME LINE L1 5652 5742 -379 1948 146 0 56 chr2 33882360 33882683 -216805171 + AluSx SINE Alu 1 305 -7 255 251 90 90 chr2 33882683 33882761 -216805093 + L1ME LINE L1 5741 5818 -303 206 342 0 13 chr2 33883019 33883098 -216804756 - MIR3 SINE MIR -16 192 115 887 165 0 0 chr2 33883900 33884033 -216803821 - FLAM_C SINE Alu 0 133 1 1477 125 60 0 chr2 33884084 33884300 -216803554 - MER30 DNA MER1_type 0 230 2 397 353 55 5 chr2 33884935 33885153 -216802701 + L2 LINE L2 2837 3065 -248 1890 149 7 13 chr2 33885447 33885748 -216802106 - AluSx SINE Alu -13 299 1 2438 80 0 0 chr2 33887372 33887672 -216800182 + AluY SINE Alu 1 300 -11 336 24 0 0 chr2 33887679 33887691 -216800163 + (CA)n Simple_repeat Simple_repeat 1 53 0 336 24 0 0 chr2 33887691 33887732 -216800122 + (CA)n Simple_repeat Simple_repeat 2 42 0 1264 180 144 8 chr2 33887809 33888204 -216799650 - Tigger6 DNA MER2_type -72 1525 1077 * 2335 184 5 2 chr2 33888201 33888636 -216799218 - Tigger6 DNA MER2_type -1161 436 1 195 102 41 102 chr2 33888787 33888836 -216799018 + L2 LINE L2 2448 2493 -821 192 383 90 31 chr2 33888987 33889475 -216798379 + L2 LINE L2 2458 2974 -340 361 324 64 73 chr2 33889800 33890208 -216797646 - L2 LINE L2 -42 3230 2827 594 312 205 29 chr2 33890321 33890975 -216796879 - L2 LINE L2 -916 2398 1630 737 59 29 0 chr2 33891252 33891354 -216796500 - L1MA2 LINE L1 0 6304 6200 242 333 0 0 chr2 33891355 33891412 -216796442 - L2 LINE L2 -12 3301 3245 224 295 48 57 chr2 33892342 33892447 -216795407 - L2 LINE L2 -37 3235 3132 268 265 193 0 chr2 33892491 33892574 -216795280 + MIR3 SINE MIR 99 197 -11 2361 84 0 19 chr2 33893130 33893439 -216794415 + AluSq SINE Alu 1 303 -10 1890 135 11 0 chr2 33893875 33894157 -216793697 - AluSx SINE Alu -27 285 1 368 359 38 5 chr2 33894992 33895176 -216792678 + MIR SINE MIR 30 219 -43 2041 120 3 32 chr2 33895228 33895544 -216792310 - AluSg1 SINE Alu -2 307 1 23 0 0 0 chr2 33895687 33895710 -216792144 + AT_rich Low_complexity Low_complexity 1 23 0 1696 160 10 14 chr2 33896967 33897260 -216790594 - AluJb SINE Alu -20 292 1 372 231 22 22 chr2 33897458 33897592 -216790262 + L1MA4A LINE L1 5989 6122 -181 371 239 11 0 chr2 33897595 33897687 -216790167 + L1MA4A LINE L1 6188 6280 -23 2510 84 0 3 chr2 33898050 33898361 -216789493 + AluSg SINE Alu 1 310 0 221 329 88 52 chr2 33899091 33899398 -216788456 - L2 LINE L2 -554 2760 2443 418 337 73 11 chr2 33899429 33899607 -216788247 - MIR3 SINE MIR -2 206 18 306 307 8 63 chr2 33901358 33901485 -216786369 - L2 LINE L2 -14 3299 3180 1873 142 3 63 chr2 33902078 33902410 -216785444 + AluJo SINE Alu 1 312 0 32021 35 2 3 chr2 33903994 33908071 -216779783 + L1PA3 LINE L1 1 4076 -2070 4844 31 0 2 chr2 33908171 33908747 -216779107 + L1PA3 LINE L1 5581 6155 0 351 0 0 0 chr2 33909128 33909167 -216778687 + (CA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 33911340 33911363 -216776491 + AT_rich Low_complexity Low_complexity 1 23 0 241 290 87 22 chr2 33911461 33911599 -216776255 + MARNA DNA Mariner 354 500 -86 1116 162 0 12 chr2 33911676 33911849 -216776005 - FRAM SINE Alu -5 171 1 266 299 28 28 chr2 33912036 33912143 -216775711 + MIR3 SINE MIR 92 198 -10 24 0 0 0 chr2 33912386 33912410 -216775444 + AT_rich Low_complexity Low_complexity 1 24 0 1094 245 45 48 chr2 33912799 33913174 -216774680 + MLT1B LTR MaLR 1 374 -16 2475 66 3 0 chr2 33913564 33913866 -216773988 + AluY SINE Alu 1 303 -8 218 386 95 16 chr2 33915795 33915970 -216771884 - MIR3 SINE MIR -3 205 13 2386 72 0 16 chr2 33915970 33916277 -216771577 - AluSx SINE Alu -10 302 1 218 386 95 16 chr2 33916277 33916290 -216771564 - MIR3 SINE MIR -195 13 2 309 360 47 0 chr2 33916961 33917111 -216770743 - MIR SINE MIR -53 209 53 23 33 0 0 chr2 33918139 33918169 -216769685 + AT_rich Low_complexity Low_complexity 1 30 0 371 308 103 14 chr2 33918392 33918538 -216769316 + MER91A DNA MER1_type 22 180 -16 321 292 84 26 chr2 33918565 33918719 -216769135 - MIR3 SINE MIR -45 163 1 180 229 115 16 chr2 33918852 33918913 -216768941 - L3 LINE CR1 -77 1500 1434 235 311 250 22 chr2 33919623 33919827 -216768027 - L3 LINE CR1 -6 1571 1415 1170 204 22 0 chr2 33919827 33920058 -216767796 + MER46A DNA MER2_type 1 236 0 235 311 250 22 chr2 33920058 33920213 -216767641 - L3 LINE CR1 -162 1415 1130 186 43 0 0 chr2 33922244 33922267 -216765587 + (TAA)n Simple_repeat Simple_repeat 3 25 0 254 362 190 9 chr2 33922270 33922491 -216765363 - MIR SINE MIR 0 262 2 2293 88 10 3 chr2 33922810 33923116 -216764738 - AluSc SINE Alu -1 308 1 2243 114 0 0 chr2 33925503 33925800 -216762054 - AluSq SINE Alu -16 297 1 197 286 0 20 chr2 33926532 33926581 -216761273 + MIR SINE MIR 32 79 -183 232 277 130 57 chr2 33928278 33928455 -216759399 - MIR SINE MIR -20 242 53 362 250 125 8 chr2 33928707 33928827 -216759027 + MER94 DNA DNA 1 134 0 375 320 125 0 chr2 33929811 33929939 -216757915 - MIR3 SINE MIR -33 175 32 285 289 280 18 chr2 33930759 33930977 -216756877 + L3 LINE CR1 978 1252 -325 450 376 9 19 chr2 33931156 33931369 -216756485 - L3 LINE CR1 0 1577 1367 451 273 125 31 chr2 33931607 33932032 -216755822 - L1MEd LINE L1 -2567 3815 3351 3141 119 80 16 chr2 33932226 33932437 -216755417 - L1MA5A LINE L1 0 6297 6101 2074 125 57 20 chr2 33932437 33932788 -216755066 - THE1B LTR MaLR 0 364 1 3141 119 80 16 chr2 33932788 33933139 -216754715 - L1MA5A LINE L1 -196 6101 5699 302 194 21 21 chr2 33933161 33933254 -216754600 - L1MEd LINE L1 -3235 3147 3055 338 210 21 61 chr2 33933292 33933450 -216754404 - L1MEd LINE L1 -3882 2500 2376 787 217 82 98 chr2 33933457 33933950 -216753904 - MER66A LTR ERV1 -12 487 100 1932 143 34 0 chr2 33934134 33934427 -216753427 - AluSx SINE Alu -9 303 1 2356 85 7 7 chr2 33934900 33935205 -216752649 - AluSc SINE Alu -4 305 1 570 290 48 35 chr2 33935375 33935606 -216752248 - MIR SINE MIR -26 236 3 554 260 136 6 chr2 33935618 33935795 -216752059 - MIR SINE MIR -6 256 57 2274 113 0 3 chr2 33935801 33936102 -216751752 - AluSc SINE Alu -9 300 1 1946 147 3 17 chr2 33936291 33936590 -216751264 + AluJo SINE Alu 1 295 -17 211 211 0 0 chr2 33936590 33936628 -216751226 + GA-rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 33936668 33936691 -216751163 + AT_rich Low_complexity Low_complexity 1 23 0 2078 169 8 72 chr2 33938981 33939478 -216748376 - MER31B LTR ERV1 0 466 2 413 161 22 3 chr2 33939714 33939853 -216748001 - MER53 DNA DNA -3 186 8 274 262 132 16 chr2 33939910 33940256 -216747598 - L1MEd LINE L1 -4730 1833 1290 480 311 67 18 chr2 33940288 33940513 -216747341 - L1MEd LINE L1 -5020 1352 1117 221 186 51 0 chr2 33940918 33940977 -216746877 + (TTTA)n Simple_repeat Simple_repeat 4 65 0 189 74 0 0 chr2 33941058 33941085 -216746769 + (TG)n Simple_repeat Simple_repeat 2 28 0 231 122 0 41 chr2 33941154 33941203 -216746651 - L1ME LINE L1 -248 5916 5870 301 119 0 0 chr2 33941466 33941508 -216746346 - 5S rRNA rRNA -79 42 1 3118 69 2 0 chr2 33941508 33941945 -216745909 + L1PA7 LINE L1 4323 4760 -1386 7234 46 3 4 chr2 33941948 33943165 -216744689 + L1PA7 LINE L1 4936 6151 -3 372 235 66 7 chr2 33944559 33944695 -216743159 - Charlie2a DNA MER1_type 0 2862 2719 * 485 219 55 7 chr2 33944693 33944839 -216743015 - Charlie2a DNA MER1_type -1189 1673 1521 628 278 36 46 chr2 33944863 33945165 -216742689 - Charlie2a DNA MER1_type -2546 316 18 445 331 26 0 chr2 33945660 33945811 -216742043 - MIR3 SINE MIR -9 199 45 249 136 0 0 chr2 33946177 33946221 -216741633 + MER116 DNA Mariner 1 44 -36 1921 118 0 51 chr2 33946757 33947089 -216740765 + AluSx SINE Alu 1 317 0 528 229 13 51 chr2 33947745 33947793 -216740061 + L1ME3 LINE L1 5996 6044 -118 2623 52 0 0 chr2 33947793 33948100 -216739754 - AluY SINE Alu -4 307 1 528 229 13 51 chr2 33948100 33948208 -216739646 + L1ME3 LINE L1 6044 6146 -16 191 285 93 65 chr2 33950091 33950414 -216737440 + L2 LINE L2 2155 2486 -828 364 300 109 9 chr2 33951152 33951262 -216736592 + L2 LINE L2 3189 3309 -4 339 208 188 0 chr2 33952418 33952514 -216735340 - FLAM_A SINE Alu -7 126 13 258 32 0 0 chr2 33952633 33952664 -216735190 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 2176 127 0 3 chr2 33952664 33952952 -216734902 - AluSp SINE Alu -24 289 1 321 68 0 0 chr2 33954236 33954280 -216733574 + (CA)n Simple_repeat Simple_repeat 1 44 0 360 308 101 13 chr2 33955039 33955198 -216732656 - MIR SINE MIR -69 193 21 1104 203 33 0 chr2 33955202 33955414 -216732440 + MER58A DNA MER1_type 1 219 -5 691 204 188 6 chr2 33955427 33955603 -216732251 + MER3 DNA MER1_type 2 209 0 831 310 16 4 chr2 33955966 33956211 -216731643 - MIR SINE MIR 0 262 15 2452 80 0 0 chr2 33956359 33956659 -216731195 - AluSx SINE Alu -12 300 1 565 55 44 22 chr2 33957005 33957096 -216730758 - MER85 DNA T2_type 0 139 47 396 0 0 0 chr2 33957096 33957140 -216730714 + (CA)n Simple_repeat Simple_repeat 1 44 0 2623 129 2 19 chr2 33958102 33958528 -216729326 + L1M2 LINE L1 2 420 -6429 3365 163 47 2 chr2 33958531 33959131 -216728723 + L1M2 LINE L1 970 1596 -5253 2394 61 3 23 chr2 33959148 33959458 -216728396 + AluY SINE Alu 1 304 -7 214 301 60 48 chr2 33959636 33959719 -216728135 + L2 LINE L2 3189 3272 -41 2121 75 39 14 chr2 33961652 33961931 -216725923 - AluY SINE Alu -4 307 22 27 0 0 0 chr2 33962068 33962095 -216725759 + AT_rich Low_complexity Low_complexity 1 27 0 189 0 0 0 chr2 33962320 33962341 -216725513 + (T)n Simple_repeat Simple_repeat 1 21 0 916 186 9 23 chr2 33962371 33962591 -216725263 - L1PA5 LINE L1 -2 6152 5936 1074 15 8 0 chr2 33963067 33963199 -216724655 + L1P1 LINE L1 5647 5779 -376 524 192 10 20 chr2 33964409 33964508 -216723346 - MER2 DNA MER2_type -246 99 2 446 193 23 0 chr2 33965131 33965219 -216722635 - MER20 DNA MER1_type 0 219 130 358 306 45 22 chr2 33965493 33965627 -216722227 - MIR3 SINE MIR -15 193 57 404 319 15 7 chr2 33967282 33967417 -216720437 - L2 LINE L2 0 3313 3178 186 43 0 0 chr2 33970075 33970098 -216717756 + (T)n Simple_repeat Simple_repeat 1 23 0 2412 83 0 3 chr2 33971209 33971510 -216716344 + AluSc SINE Alu 1 300 -9 2371 102 0 3 chr2 33971511 33971815 -216716039 + AluY SINE Alu 1 303 -8 816 295 115 28 chr2 33972045 33972305 -216715549 + L1ME4a LINE L1 5258 5494 -627 2398 178 73 24 chr2 33972305 33972800 -216715054 - MLT2B1 LTR ERVL -1 519 1 816 295 115 28 chr2 33972800 33973332 -216714522 + L1ME4a LINE L1 5494 6119 -2 6283 173 118 36 chr2 33973534 33974955 -216712899 + MER52A LTR ERV1 219 1755 0 306 0 0 0 chr2 33976630 33976664 -216711190 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 254 136 0 0 chr2 33977494 33977538 -216710316 - AluSq SINE Alu -2 299 256 1410 105 14 29 chr2 33977538 33977748 -216710106 - AluSq SINE Alu -106 207 1 2427 64 0 3 chr2 33977848 33978143 -216709711 + AluY SINE Alu 13 306 -5 664 275 70 18 chr2 33980038 33980300 -216707554 - MIR SINE MIR 0 262 4 477 302 34 42 chr2 33982059 33982356 -216705498 - L3 LINE CR1 -3 1574 1230 2335 84 7 0 chr2 33982920 33983216 -216704638 + AluSp SINE Alu 1 298 -15 1971 153 0 0 chr2 33984082 33984364 -216703490 + AluSx SINE Alu 1 282 -30 213 39 0 0 chr2 33984367 33984393 -216703461 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 200 320 111 23 chr2 33984930 33985102 -216702752 + MIR SINE MIR 70 256 -6 2423 74 7 10 chr2 33985263 33985645 -216702209 - AluY SINE Alu 0 381 1 1730 161 13 13 chr2 33988300 33988599 -216699255 + AluJo SINE Alu 1 299 -13 381 304 145 50 chr2 33988610 33989075 -216698779 - L2 LINE L2 -32 3240 2736 261 83 0 0 chr2 33989568 33989604 -216698250 + (TA)n Simple_repeat Simple_repeat 1 36 0 356 217 60 12 chr2 33990214 33990297 -216697557 - L2 LINE L2 0 3313 3227 2452 69 0 0 chr2 33990297 33990586 -216697268 + AluSc SINE Alu 1 289 -20 790 188 0 36 chr2 33990761 33990899 -216696955 - FLAM_A SINE Alu 0 133 1 1907 234 107 48 chr2 33991375 33992322 -216695532 + L1ME3A LINE L1 2559 3561 -2585 271 296 79 46 chr2 33992332 33992484 -216695370 + MLT1J LTR MaLR 295 451 -60 3270 279 54 16 chr2 33992485 33993788 -216694066 + L1ME3A LINE L1 3840 5191 -955 2110 263 80 21 chr2 33993841 33994400 -216693454 + L1ME3A LINE L1 5352 5967 -203 2163 123 31 47 chr2 33994400 33994781 -216693073 + THE1C LTR MaLR 1 375 0 2110 263 80 21 chr2 33994781 33994969 -216692885 + L1ME3A LINE L1 5967 6143 -27 2125 113 7 3 chr2 33994969 33995294 -216692560 - AluSg SINE Alu 0 310 1 1755 130 47 18 chr2 33996202 33996510 -216691344 + AluSg SINE Alu 1 316 0 2206 102 0 20 chr2 33998150 33998455 -216689399 + AluSc SINE Alu 1 299 -10 1273 164 86 112 chr2 33998640 33998745 -216689109 - MER44D DNA MER2_type -1882 609 503 267 31 0 0 chr2 33998745 33998777 -216689077 + (CATA)n Simple_repeat Simple_repeat 2 33 0 1273 164 86 112 chr2 33998777 33999019 -216688835 - MER44D DNA MER2_type -1988 503 1 449 277 196 18 chr2 33999055 33999275 -216688579 - MIR SINE MIR 0 262 4 244 209 0 0 chr2 33999467 33999510 -216688344 + Tigger5 DNA MER2_type 1 43 -2280 1478 160 95 90 chr2 33999702 33999799 -216688055 + L1MB4 LINE L1 5767 5862 -318 2199 99 0 63 chr2 33999799 34000132 -216687722 + AluSx SINE Alu 1 312 0 1478 160 95 90 chr2 34000132 34000446 -216687408 + L1MB4 LINE L1 5862 6180 0 697 191 37 133 chr2 34001511 34001588 -216686266 - MER20 DNA MER1_type 0 219 136 2622 44 0 19 chr2 34001588 34001905 -216685949 - AluY SINE Alu 0 311 1 697 191 37 133 chr2 34001905 34002068 -216685786 - MER20 DNA MER1_type -83 136 2 359 283 145 6 chr2 34003386 34003545 -216684309 + MER5A DNA MER1_type 9 189 0 254 326 30 55 chr2 34003556 34003734 -216684120 - MER5B DNA MER1_type -3 186 1 2194 132 140 31 chr2 34003906 34004292 -216683562 + MSTA LTR MaLR 1 428 0 185 375 31 10 chr2 34006903 34006999 -216680855 - MIR SINE MIR -67 141 44 319 305 78 14 chr2 34007452 34007593 -216680261 - L2 LINE L2 -4 3309 3160 2169 77 0 24 chr2 34008480 34008778 -216679076 + AluY SINE Alu 1 291 -20 318 218 34 88 chr2 34009141 34009288 -216678566 + L2 LINE L2 3001 3139 -174 1850 103 7 18 chr2 34009784 34010065 -216677789 - AluY SINE Alu -33 278 1 2541 64 0 10 chr2 34011563 34011575 -216676279 - AluY SINE Alu -1 310 299 225 65 0 0 chr2 34011575 34011606 -216676248 + (TA)n Simple_repeat Simple_repeat 2 32 0 2541 64 0 10 chr2 34011606 34011906 -216675948 - AluY SINE Alu -12 299 1 216 235 20 0 chr2 34012404 34012455 -216675399 + L2 LINE L2 1765 1816 -1498 262 309 36 0 chr2 34012506 34012590 -216675264 + MIR SINE MIR 146 232 -30 216 0 0 0 chr2 34012954 34012978 -216674876 + (TG)n Simple_repeat Simple_repeat 2 25 0 292 311 108 7 chr2 34013907 34014055 -216673799 + MIR SINE MIR 20 182 -80 280 267 57 80 chr2 34014489 34014665 -216673189 + MER104 DNA Tc2 4 175 -5 2053 173 11 11 chr2 34014679 34015044 -216672810 - L1PB4 LINE L1 0 6156 5792 237 189 54 27 chr2 34015174 34015248 -216672606 + L1MC/D LINE L1 5741 5816 -1992 2176 80 31 7 chr2 34015260 34015548 -216672306 + AluY SINE Alu 1 295 -16 764 65 74 9 chr2 34015560 34015668 -216672186 + L1P5 LINE L1 5545 5659 -497 900 141 0 0 chr2 34015670 34015805 -216672049 - L1PB4 LINE L1 -383 5773 5639 1886 157 0 0 chr2 34015927 34016220 -216671634 + AluJb SINE Alu 6 298 -14 1398 232 304 8 chr2 34016607 34017206 -216670648 - LTR50 LTR ERVL -2 793 18 809 261 141 70 chr2 34017588 34018106 -216669748 - MLT1H1 LTR MaLR 0 555 1 2432 83 0 0 chr2 34018881 34019182 -216668672 + AluSx SINE Alu 1 301 -11 2092 171 49 0 chr2 34019745 34020091 -216667763 + MLT1A1 LTR MaLR 3 365 0 2267 62 10 40 chr2 34020130 34020434 -216667420 + AluY SINE Alu 1 295 -16 1587 231 52 30 chr2 34020781 34021222 -216666632 - MLT1C LTR MaLR -12 455 5 327 294 96 7 chr2 34021763 34021899 -216665955 + MIR SINE MIR 87 234 -28 2343 97 0 3 chr2 34022021 34022329 -216665525 - AluSq SINE Alu -4 309 3 2287 104 3 0 chr2 34022427 34022735 -216665119 - AluSg SINE Alu -1 309 1 608 124 11 0 chr2 34022787 34022876 -216664978 - 5S rRNA rRNA -31 90 1 3619 38 0 5 chr2 34023661 34024081 -216663773 + L1PA4 LINE L1 5735 6152 -3 243 0 0 0 chr2 34024085 34024112 -216663742 + (CAA)n Simple_repeat Simple_repeat 2 28 0 239 367 163 0 chr2 34024206 34024353 -216663501 - MIR SINE MIR -71 191 21 249 353 34 78 chr2 34025405 34025562 -216662292 + L3 LINE CR1 51 199 -1378 2370 81 10 3 chr2 34025562 34025869 -216661985 + AluY SINE Alu 1 309 -2 249 353 34 78 chr2 34025869 34025915 -216661939 + L3 LINE CR1 199 245 -1332 544 161 35 0 chr2 34026183 34026270 -216661584 + 5S rRNA rRNA 1 90 -31 180 352 0 0 chr2 34026333 34026404 -216661450 - L2 LINE L2 -525 2789 2719 240 239 33 103 chr2 34026405 34026589 -216661265 + MER104 DNA Tc2 1 171 -9 1629 324 88 21 chr2 34026636 34027543 -216660311 - L2 LINE L2 -627 2687 1720 402 314 154 33 chr2 34027611 34027910 -216659944 - L2 LINE L2 -556 2758 2424 1510 139 12 148 chr2 34028074 34028411 -216659443 + AluJb SINE Alu 1 291 -11 558 251 6 9 chr2 34029654 34029794 -216658060 + MIR3 SINE MIR 32 175 -33 2384 78 3 0 chr2 34032934 34033227 -216654627 - AluSp SINE Alu -19 294 1 1617 70 0 5 chr2 34033362 34033563 -216654291 + AluY SINE Alu 105 304 -7 195 42 0 0 chr2 34033948 34033972 -216653882 + (GGA)n Simple_repeat Simple_repeat 2 25 0 858 140 140 35 chr2 34034744 34034915 -216652939 - AluSg/x SINE Alu -16 296 108 572 279 135 5 chr2 34035145 34035353 -216652501 + MIR SINE MIR 9 243 -19 309 267 99 38 chr2 34035533 34035664 -216652190 - MER5A DNA MER1_type 0 189 51 189 0 0 0 chr2 34035666 34035687 -216652167 + (CTG)n Simple_repeat Simple_repeat 2 22 0 1265 143 135 8 chr2 34036950 34037187 -216650667 + Tigger7 DNA MER2_type 1 267 -2220 570 157 11 0 chr2 34037192 34037281 -216650573 + Tigger7 DNA MER2_type 2397 2486 -1 377 290 73 0 chr2 34037284 34037408 -216650446 - MIR SINE MIR -117 145 13 1958 134 36 0 chr2 34037773 34038049 -216649805 + AluSx SINE Alu 3 288 -24 224 129 0 0 chr2 34038926 34038957 -216648897 - L2 LINE L2 -18 3295 3265 2140 115 10 0 chr2 34039852 34040148 -216647706 + AluSx SINE Alu 1 299 -13 2248 47 0 50 chr2 34040698 34041021 -216646833 - AluY SINE Alu 0 308 1 21 0 0 0 chr2 34042275 34042296 -216645558 + AT_rich Low_complexity Low_complexity 1 21 0 1360 136 182 25 chr2 34042877 34043201 -216644653 - THE1C LTR MaLR 0 375 1 351 0 0 0 chr2 34043362 34043401 -216644453 + (TG)n Simple_repeat Simple_repeat 2 40 0 2088 120 0 19 chr2 34043401 34043709 -216644145 - AluSx SINE Alu -9 303 2 246 75 0 25 chr2 34044337 34044377 -216643477 + MADE1 DNA Mariner 2 40 -40 2355 106 0 3 chr2 34044377 34044689 -216643165 - AluY SINE Alu 0 311 1 2196 110 3 3 chr2 34045474 34045773 -216642081 + AluSx SINE Alu 1 299 -13 803 158 0 96 chr2 34046663 34046872 -216640982 - MER53 DNA DNA 0 189 1 547 276 58 11 chr2 34047419 34047617 -216640237 - MIR SINE MIR 0 262 52 477 241 50 87 chr2 34047950 34048083 -216639771 - L1MA9 LINE L1 -123 6189 6053 1870 162 7 3 chr2 34048083 34048385 -216639469 - AluJb SINE Alu -9 303 1 477 241 50 87 chr2 34048385 34048550 -216639304 - L1MA9 LINE L1 -259 6053 5902 520 196 147 85 chr2 34049065 34049361 -216638493 + L1ME4a LINE L1 5711 6038 -83 1629 93 0 0 chr2 34049361 34049566 -216638288 + AluSg/x SINE Alu 85 289 -21 520 196 147 85 chr2 34049566 34049656 -216638198 + L1ME4a LINE L1 6038 6121 0 614 389 29 3 chr2 34049978 34050284 -216637570 + L3 LINE CR1 229 542 -1035 1511 186 42 45 chr2 34050420 34050732 -216637122 - AluJo SINE Alu -1 311 1 1379 209 138 20 chr2 34050985 34051392 -216636462 - MSTB2 LTR MaLR -2 455 1 477 293 176 55 chr2 34051507 34051978 -216635876 - L2 LINE L2 -547 2767 2240 590 267 128 15 chr2 34053447 34053642 -216634212 + MIR SINE MIR 46 262 0 560 81 35 0 chr2 34054631 34054718 -216633136 + L1MB8 LINE L1 6077 6166 -12 260 237 29 65 chr2 34054850 34054989 -216632865 - L1ME4a LINE L1 -215 5906 5773 1350 117 0 0 chr2 34055063 34055242 -216632612 - AluSg/x SINE Alu -2 310 132 210 37 0 0 chr2 34055242 34055269 -216632585 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1940 129 11 3 chr2 34055275 34055562 -216632292 - AluSx SINE Alu -23 289 1 2400 97 0 0 chr2 34055641 34055941 -216631913 - AluSg SINE Alu -9 301 2 394 130 0 98 chr2 34055971 34056063 -216631791 - L1MA5A LINE L1 0 6297 6215 21 0 0 0 chr2 34056098 34056119 -216631735 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr2 34056177 34056232 -216631622 + AT_rich Low_complexity Low_complexity 1 55 0 1874 110 0 4 chr2 34056340 34056586 -216631268 + AluSx SINE Alu 32 276 -36 219 69 0 0 chr2 34056599 34056628 -216631226 + (TAA)n Simple_repeat Simple_repeat 2 30 0 252 364 45 0 chr2 34057527 34057615 -216630239 + MIR3 SINE MIR 65 156 -52 486 258 26 53 chr2 34057823 34057974 -216629880 + MIR SINE MIR 54 200 -62 420 289 107 13 chr2 34058077 34058236 -216629618 - L2 LINE L2 -185 3087 2914 294 282 35 0 chr2 34058345 34058430 -216629424 - MIR SINE MIR -62 200 113 2038 113 22 0 chr2 34058465 34058789 -216629065 - AluSg SINE Alu 0 330 1 230 0 0 32 chr2 34058798 34058829 -216629025 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1275 182 91 3 chr2 34058829 34059125 -216628729 - L1MD3 LINE L1 -170 7825 7504 1903 75 120 0 chr2 34060059 34060325 -216627529 + AluSc SINE Alu 1 298 -1 215 268 0 0 chr2 34060558 34060614 -216627240 - MIR SINE MIR -50 212 157 298 252 75 101 chr2 34062731 34062890 -216624964 - MIR3 SINE MIR -7 201 47 240 188 58 14 chr2 34063663 34063732 -216624122 + L1ME LINE L1 5532 5603 -518 1019 111 12 25 chr2 34063975 34064137 -216623717 + AluSx SINE Alu 1 160 -152 471 48 0 0 chr2 34064145 34064207 -216623647 + (CA)n Simple_repeat Simple_repeat 2 63 0 2180 104 3 53 chr2 34064415 34064542 -216623312 - MER1B DNA MER1_type -2373 337 205 2430 73 3 3 chr2 34064542 34064844 -216623010 - AluY SINE Alu -9 302 1 2180 104 3 53 chr2 34064844 34065071 -216622783 - MER1B DNA MER1_type -2505 205 1 701 246 67 88 chr2 34066097 34066226 -216621628 - L2 LINE L2 -14 3299 3169 1987 118 0 44 chr2 34066226 34066522 -216621332 + AluSc SINE Alu 1 283 -26 701 246 67 88 chr2 34066522 34066677 -216621177 - L2 LINE L2 -144 3169 3021 1035 245 107 15 chr2 34066783 34067159 -216620695 - L2 LINE L2 -983 2331 1863 2331 97 0 0 chr2 34067482 34067782 -216620072 + AluSx SINE Alu 1 300 -12 2346 78 3 0 chr2 34068002 34068295 -216619559 + AluSc SINE Alu 1 294 -15 1394 222 37 22 chr2 34068351 34068882 -216618972 + L1ME1 LINE L1 5505 6161 -5 21 57 0 0 chr2 34069532 34069567 -216618287 + AT_rich Low_complexity Low_complexity 1 35 0 2260 108 7 0 chr2 34070195 34070492 -216617362 + AluSx SINE Alu 1 299 -13 2065 115 3 7 chr2 34071145 34071441 -216616413 - AluSg SINE Alu -15 295 1 426 300 127 34 chr2 34071603 34071840 -216616014 - MIR SINE MIR 0 262 4 1519 182 11 7 chr2 34075463 34075749 -216612105 + AluJo SINE Alu 1 287 -25 220 333 178 67 chr2 34075827 34076007 -216611847 - L2 LINE L2 0 3272 3073 365 169 39 0 chr2 34076085 34076162 -216611692 - MER116 DNA Mariner 0 80 1 1908 138 31 3 chr2 34076859 34077150 -216610704 + AluSq SINE Alu 1 299 -14 1241 166 4 53 chr2 34079159 34079406 -216608448 + MER46A DNA MER2_type 2 236 0 272 312 193 0 chr2 34079543 34079652 -216608202 - L2 LINE L2 0 3313 3184 1307 136 14 47 chr2 34080094 34080308 -216607546 + AluJo SINE Alu 87 293 -19 2385 94 0 0 chr2 34080311 34080610 -216607244 + AluSq SINE Alu 1 299 -14 429 291 151 48 chr2 34081127 34081281 -216606573 - L2 LINE L2 0 3313 3176 1977 129 9 55 chr2 34081281 34081607 -216606247 + AluSx SINE Alu 1 311 -1 429 291 151 48 chr2 34081607 34081703 -216606151 - L2 LINE L2 -137 3176 3037 667 197 94 60 chr2 34081899 34082132 -216605722 + L1MC1 LINE L1 6093 6333 0 407 213 37 28 chr2 34083769 34083877 -216603977 - MIR SINE MIR -4 258 150 1662 113 94 50 chr2 34084231 34084550 -216603304 - MER47A DNA MER2_type 0 366 34 726 142 9 0 chr2 34084551 34084664 -216603190 + AluSq/x SINE Alu 3 116 -197 22 35 0 0 chr2 34085237 34085266 -216602588 + AT_rich Low_complexity Low_complexity 1 29 0 1762 169 3 29 chr2 34085688 34085996 -216601858 + AluJo SINE Alu 1 300 -12 359 309 92 94 chr2 34086939 34087395 -216600459 + L2 LINE L2 2809 3263 -9 194 262 71 71 chr2 34087624 34087708 -216600146 - L2 LINE L2 0 3272 3189 376 305 67 70 chr2 34087710 34087995 -216599859 + L2 LINE L2 2985 3268 -4 2305 101 0 3 chr2 34088969 34089267 -216598587 + AluSx SINE Alu 1 297 -15 2499 59 0 7 chr2 34089402 34089709 -216598145 + AluY SINE Alu 1 305 -6 208 219 0 0 chr2 34090270 34090311 -216597543 + L3 LINE CR1 1523 1563 -14 1890 121 38 0 chr2 34091737 34092026 -216595828 + AluSx SINE Alu 1 300 -12 515 280 89 52 chr2 34092863 34093134 -216594720 + L3 LINE CR1 1294 1574 -3 22 0 0 0 chr2 34093547 34093569 -216594285 + AT_rich Low_complexity Low_complexity 1 22 0 447 297 7 71 chr2 34093777 34093932 -216593922 - MIR3 SINE MIR -28 180 36 603 343 99 33 chr2 34094240 34094689 -216593165 + L2 LINE L2 1924 2342 -972 189 0 0 0 chr2 34094689 34094710 -216593144 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2264 100 0 0 chr2 34094713 34094994 -216592860 - AluSg SINE Alu -25 285 5 603 343 99 33 chr2 34094994 34095277 -216592577 + L2 LINE L2 2343 2709 -605 2104 146 0 0 chr2 34095535 34095844 -216592010 - AluSx SINE Alu 0 312 4 216 310 69 0 chr2 34096036 34096094 -216591760 + L2 LINE L2 3207 3268 -4 23 54 0 0 chr2 34096163 34096200 -216591654 + AT_rich Low_complexity Low_complexity 1 37 0 2432 63 0 13 chr2 34096429 34096731 -216591123 - AluY SINE Alu -13 298 1 405 0 0 0 chr2 34097255 34097300 -216590554 + (CA)n Simple_repeat Simple_repeat 1 45 0 1339 146 9 9 chr2 34097313 34097533 -216590321 - AluJo SINE Alu -13 299 80 1386 196 116 19 chr2 34097850 34098161 -216589693 + MER2 DNA MER2_type 1 341 -4 193 94 0 0 chr2 34098329 34098361 -216589493 + L2 LINE L2 3022 3053 -219 2378 157 13 8 chr2 34098573 34098968 -216588886 - LOR1b LTR ERV1 0 461 65 1979 67 119 0 chr2 34098969 34099237 -216588617 + AluY SINE Alu 2 301 -10 217 287 11 0 chr2 34100946 34101040 -216586814 + (TA)n Simple_repeat Simple_repeat 2 96 0 23 0 0 0 chr2 34101926 34101949 -216585905 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 34101996 34102017 -216585837 + AT_rich Low_complexity Low_complexity 1 21 0 191 83 0 0 chr2 34102536 34102560 -216585294 - MIR SINE MIR -140 68 45 183 265 218 14 chr2 34104272 34104419 -216583435 + MIR SINE MIR 83 259 -3 256 238 199 37 chr2 34105128 34105264 -216582590 + MIR3 SINE MIR 13 165 -43 335 302 43 7 chr2 34105309 34105448 -216582406 - MIR SINE MIR -3 259 116 752 158 17 0 chr2 34108215 34108335 -216579519 - FLAM_C SINE Alu -11 122 1 312 294 159 32 chr2 34109182 34109308 -216578546 + MIR SINE MIR 12 153 -109 1715 129 105 14 chr2 34111039 34111325 -216576529 + AluJb SINE Alu 1 312 0 1907 101 14 20 chr2 34111509 34111805 -216576049 - AluSg SINE Alu -16 294 1 228 333 97 0 chr2 34112090 34112183 -216575671 + MIR SINE MIR 36 137 -71 2384 93 0 10 chr2 34112483 34112794 -216575060 + AluSx SINE Alu 1 308 -4 2434 90 15 0 chr2 34112794 34113128 -216574726 + L1PA14 LINE L1 5490 5828 -333 2043 102 67 0 chr2 34113129 34113413 -216574441 + AluSp SINE Alu 2 304 -9 495 293 142 5 chr2 34114501 34114706 -216573148 + MIR SINE MIR 30 262 0 488 223 85 0 chr2 34115490 34115620 -216572234 + MER5A DNA MER1_type 49 189 0 468 147 0 0 chr2 34115628 34115703 -216572151 + AluJ/FRAM SINE Alu 225 299 -13 2167 109 0 0 chr2 34115764 34116048 -216571806 - AluSg SINE Alu -26 284 1 2026 113 20 14 chr2 34116604 34116897 -216570957 - AluJb SINE Alu -17 295 1 307 272 33 11 chr2 34117102 34117194 -216570660 + CT-rich Low_complexity Low_complexity 3 96 0 427 160 126 0 chr2 34117289 34117408 -216570446 - L1ME3A LINE L1 -86 6084 5951 806 216 56 61 chr2 34118258 34118293 -216569561 - MER58A DNA MER1_type -2204 216 182 2066 146 0 7 chr2 34118293 34118595 -216569259 - AluSg SINE Alu -10 300 1 806 216 56 61 chr2 34118595 34118772 -216569082 - MER58A DNA MER1_type -2238 182 5 645 164 10 0 chr2 34118988 34119092 -216568762 - FLAM_A SINE Alu -12 130 26 1112 98 149 0 chr2 34119164 34119338 -216568516 - L1PA14 LINE L1 -2 6159 5960 195 42 0 0 chr2 34119339 34119363 -216568491 + (T)n Simple_repeat Simple_repeat 1 24 0 7822 43 0 27 chr2 34119390 34120736 -216567118 - L1PA5 LINE L1 0 6154 4830 2382 88 0 0 chr2 34121088 34121385 -216566469 + AluY SINE Alu 1 297 -14 406 223 155 10 chr2 34121445 34121548 -216566306 - L2 LINE L2 0 3313 3196 2226 98 0 23 chr2 34121645 34121952 -216565902 - AluSx SINE Alu -12 300 1 526 294 13 7 chr2 34122316 34122469 -216565385 - LTR16A LTR ERVL -2 448 295 2778 249 102 44 chr2 34122471 34122834 -216565020 - Charlie7 DNA MER1_type -1090 1522 1181 2328 80 3 10 chr2 34122834 34123133 -216564721 + AluSq SINE Alu 1 297 -16 2778 249 102 44 chr2 34123133 34123975 -216563879 - Charlie7 DNA MER1_type -1431 1181 242 1580 189 0 27 chr2 34123975 34124272 -216563582 - AluJo SINE Alu -23 289 1 2778 249 102 44 chr2 34124272 34124303 -216563551 - Charlie7 DNA MER1_type -2370 242 214 235 245 38 0 chr2 34124305 34124358 -216563496 + MLT1J2 LTR MaLR 392 446 -4 529 311 115 17 chr2 34124394 34124629 -216563225 - L3 LINE CR1 -688 889 632 2574 66 0 0 chr2 34125094 34125397 -216562457 + AluSx SINE Alu 1 303 -9 221 395 40 0 chr2 34125488 34125612 -216562242 - L2 LINE L2 -938 2376 2248 1212 203 4 4 chr2 34125815 34126051 -216561803 + AluJo SINE Alu 59 294 -18 1770 120 71 4 chr2 34126616 34126903 -216560951 + AluSx SINE Alu 3 307 0 2165 75 13 32 chr2 34127220 34127528 -216560326 - AluY SINE Alu -9 302 1 2321 103 3 6 chr2 34127541 34127852 -216560002 - AluSg SINE Alu 0 310 1 311 286 135 51 chr2 34128508 34128878 -216558976 + MLT1K LTR MaLR 188 588 0 2353 62 0 0 chr2 34128948 34129222 -216558632 + AluY SINE Alu 1 274 -37 183 42 0 0 chr2 34129222 34129246 -216558608 + (CA)n Simple_repeat Simple_repeat 1 24 0 313 266 38 87 chr2 34129621 34129805 -216558049 + MLT1K LTR MaLR 219 393 -195 215 345 115 7 chr2 34130238 34130377 -216557477 - MIR SINE MIR -89 173 20 2620 40 3 0 chr2 34130628 34130928 -216556926 - AluY SINE Alu -8 303 3 2216 62 21 92 chr2 34131344 34131681 -216556173 - AluYb8 SINE Alu -5 313 1 1261 165 0 36 chr2 34131795 34132019 -216555835 + L1MB2 LINE L1 5949 6164 -7 304 319 52 37 chr2 34132306 34132441 -216555413 - MER5A DNA MER1_type -3 186 50 * 341 281 44 26 chr2 34132329 34132443 -216555411 + MER5A DNA MER1_type 37 152 -37 364 153 0 0 chr2 34132449 34132508 -216555346 - Alu SINE Alu -2 298 240 2038 139 3 3 chr2 34132548 34132849 -216555005 - AluSg SINE Alu -9 301 1 213 306 59 24 chr2 34133615 34133700 -216554154 + L3 LINE CR1 1488 1575 -2 1846 82 0 0 chr2 34134313 34134545 -216553309 - AluY SINE Alu 0 311 80 463 205 109 32 chr2 34134582 34134738 -216553116 + MLT1E LTR MaLR 1 168 -425 1088 209 110 22 chr2 34134795 34135068 -216552786 - MLT1E LTR MaLR -97 496 200 282 247 0 14 chr2 34137043 34137116 -216550738 + CT-rich Low_complexity Low_complexity 2 73 0 2459 76 0 0 chr2 34137310 34137611 -216550243 + AluSx SINE Alu 1 301 -11 297 169 182 0 chr2 34138029 34138106 -216549748 - MER5A DNA MER1_type -3 186 96 2244 94 3 19 chr2 34138147 34138456 -216549398 - AluSc SINE Alu -5 304 1 28 48 0 0 chr2 34139865 34139907 -216547947 + AT_rich Low_complexity Low_complexity 1 42 0 2214 107 7 0 chr2 34141122 34141421 -216546433 + AluSx SINE Alu 1 301 -11 779 159 19 111 chr2 34142308 34142516 -216545338 - MER53 DNA DNA 0 189 1 543 273 58 11 chr2 34143065 34143263 -216544591 - MIR SINE MIR 0 262 52 585 241 50 87 chr2 34143599 34143732 -216544122 - L1MA9 LINE L1 -123 6189 6053 1846 163 7 3 chr2 34143732 34144033 -216543821 - AluJb SINE Alu -10 302 1 585 241 50 87 chr2 34144033 34144198 -216543656 - L1MA9 LINE L1 -259 6053 5902 692 195 144 82 chr2 34144711 34145009 -216542845 + L1ME4a LINE L1 5709 6038 -83 1616 98 0 0 chr2 34145009 34145214 -216542640 + AluSg/x SINE Alu 87 291 -21 692 195 144 82 chr2 34145214 34145304 -216542550 + L1ME4a LINE L1 6038 6121 0 1230 163 22 132 chr2 34146436 34146457 -216541397 - MER33 DNA MER1_type -2261 324 302 1521 179 20 27 chr2 34146457 34146754 -216541100 + AluJo SINE Alu 18 312 0 1230 163 22 132 chr2 34146754 34146873 -216540981 - MER33 DNA MER1_type -2283 302 171 1589 169 7 25 chr2 34146873 34147152 -216540702 + AluJo SINE Alu 12 285 -27 1230 163 22 132 chr2 34147152 34147373 -216540481 - MER33 DNA MER1_type -2414 171 2 22 0 0 0 chr2 34148453 34148475 -216539379 + AT_rich Low_complexity Low_complexity 1 22 0 24 96 0 0 chr2 34148536 34148609 -216539245 + AT_rich Low_complexity Low_complexity 1 73 0 186 43 0 0 chr2 34148987 34149010 -216538844 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2261 63 7 11 chr2 34149012 34149299 -216538555 - AluY SINE Alu -25 286 1 1667 63 0 5 chr2 34149703 34149909 -216537945 + AluY SINE Alu 1 205 -106 477 35 0 0 chr2 34149909 34149966 -216537888 + AluY SINE Alu 244 300 -11 1942 123 42 3 chr2 34150282 34150566 -216537288 - AluSx SINE Alu -17 295 1 2761 158 12 26 chr2 34151188 34151688 -216536166 + L1MB4 LINE L1 5687 6179 -1 310 71 0 0 chr2 34151714 34151756 -216536098 + L1MB8 LINE L1 6131 6172 -6 2196 107 3 0 chr2 34152320 34152609 -216535245 + AluSc SINE Alu 1 290 -19 678 248 66 30 chr2 34152717 34152915 -216534939 - MLT1F1 LTR MaLR -8 559 355 2214 57 0 50 chr2 34153430 34153753 -216534101 - AluY SINE Alu 0 308 1 21 0 0 0 chr2 34155007 34155028 -216532826 + AT_rich Low_complexity Low_complexity 1 21 0 1539 138 179 25 chr2 34155609 34155934 -216531920 - THE1C LTR MaLR 0 375 1 333 0 0 0 chr2 34156097 34156134 -216531720 + (TG)n Simple_repeat Simple_repeat 2 38 0 2013 110 3 21 chr2 34156150 34156441 -216531413 - AluSx SINE Alu -25 287 2 296 77 0 0 chr2 34157069 34157108 -216530746 + MADE1 DNA Mariner 2 40 -40 2347 106 0 3 chr2 34157108 34157420 -216530434 - AluY SINE Alu 0 311 1 1720 132 73 45 chr2 34158206 34158495 -216529359 + AluSq SINE Alu 1 297 -16 388 247 0 21 chr2 34158506 34158599 -216529255 - MIR3 SINE MIR -6 202 112 562 189 9 0 chr2 34158648 34158754 -216529100 - L1MB5 LINE L1 0 6174 6068 275 261 190 62 chr2 34159716 34159927 -216527927 + MIR SINE MIR 20 257 -5 2546 235 57 16 chr2 34160406 34161692 -216526162 - L1M2c LINE L1 -4504 2603 1275 255 265 0 0 chr2 34161928 34161996 -216525858 + C-rich Low_complexity Low_complexity 4 71 0 1879 153 0 3 chr2 34162137 34162424 -216525430 - AluJb SINE Alu -26 286 1 2109 121 0 0 chr2 34162641 34162958 -216524896 - AluSx SINE Alu 0 319 3 2091 116 7 7 chr2 34163520 34163813 -216524041 + AluSx SINE Alu 1 293 -19 201 154 0 0 chr2 34163836 34163875 -216523979 + (TG)n Simple_repeat Simple_repeat 2 40 0 760 97 0 0 chr2 34163876 34163969 -216523885 - 7SLRNA srpRNA srpRNA -17 303 211 336 39 77 19 chr2 34163973 34164025 -216523829 + MLT2A2 LTR ERVL 399 453 0 1102 129 129 77 chr2 34164025 34164273 -216523581 + LTR1B LTR ERV1 355 615 -211 4168 79 5 17 chr2 34164391 34164976 -216522878 - L1P LINE L1 -962 5184 4607 1603 63 0 5 chr2 34164974 34165181 -216522673 - L1PA14 LINE L1 -187 5974 5769 * 231 279 33 0 chr2 34165314 34165375 -216522479 - MIR SINE MIR -116 146 84 193 307 183 46 chr2 34165442 34165595 -216522259 - MIR3 SINE MIR -25 183 10 2015 112 17 7 chr2 34166290 34166633 -216521221 - AluSx SINE Alu 0 359 14 2015 112 17 7 chr2 34168328 34168671 -216519183 - AluSx SINE Alu 0 359 14 779 113 105 8 chr2 34169533 34169666 -216518188 + L1MB3 LINE L1 6029 6174 -9 2291 82 0 50 chr2 34169666 34169984 -216517870 - AluY SINE Alu -9 302 1 897 175 19 0 chr2 34171658 34171817 -216516037 + MLT1B LTR MaLR 1 162 -228 2145 197 130 46 chr2 34171817 34172486 -216515368 - MER50 LTR ERV1 0 734 10 1291 126 31 27 chr2 34172493 34172716 -216515138 + MLT1B LTR MaLR 167 390 0 1506 130 22 115 chr2 34172940 34173263 -216514591 + AluYb8 SINE Alu 1 293 -25 832 184 17 46 chr2 34173283 34173457 -216514397 + MLT1D LTR MaLR 5 173 -332 1247 143 0 11 chr2 34173539 34173728 -216514126 + AluJb SINE Alu 1 187 -125 333 242 15 0 chr2 34173731 34173797 -216514057 + MLT1E2 LTR MaLR 530 596 -30 1960 126 0 14 chr2 34174288 34174609 -216513245 - AluSx SINE Alu 0 317 1 2210 89 0 10 chr2 34175178 34175469 -216512385 + AluSc SINE Alu 1 288 -21 1432 183 114 34 chr2 34175683 34175734 -216512120 + MER34C LTR ERV1 36 82 -503 2401 77 0 3 chr2 34175734 34176032 -216511822 - AluSc SINE Alu -12 297 1 1432 183 114 34 chr2 34176032 34176454 -216511400 + MER34C LTR ERV1 82 581 -4 2150 123 0 0 chr2 34176862 34177163 -216510691 + AluSq SINE Alu 1 301 -12 230 300 50 20 chr2 34177190 34177290 -216510564 - L2 LINE L2 -343 2929 2827 358 297 45 18 chr2 34177970 34178081 -216509773 - L2 LINE L2 -1 3312 3199 2418 65 0 0 chr2 34178215 34178507 -216509347 - AluY SINE Alu -15 296 5 226 263 11 84 chr2 34178649 34178744 -216509110 + MIR SINE MIR 18 105 -103 23 33 0 0 chr2 34179380 34179410 -216508444 + AT_rich Low_complexity Low_complexity 1 30 0 345 356 20 14 chr2 34179678 34179824 -216508030 - L1M4 LINE L1 -1300 4846 4700 6123 142 26 27 chr2 34179845 34181002 -216506852 - L1MC2 LINE L1 0 6344 5186 1144 266 139 20 chr2 34180987 34181678 -216506176 - L1M4 LINE L1 -1462 4684 3912 * 2278 104 0 28 chr2 34182494 34182811 -216505043 + AluSq SINE Alu 1 308 -5 360 178 0 0 chr2 34183026 34183099 -216504755 + CT-rich Low_complexity Low_complexity 2 74 0 183 42 0 0 chr2 34183094 34183118 -216504736 + (TTCCC)n Simple_repeat Simple_repeat 1 24 0 * 2177 104 14 0 chr2 34183118 34183405 -216504449 - AluSx SINE Alu -21 291 1 1980 88 0 0 chr2 34183532 34183783 -216504071 + AluY SINE Alu 44 294 -17 2589 47 0 3 chr2 34184720 34185019 -216502835 - AluY SINE Alu -13 298 1 312 27 0 0 chr2 34185511 34185548 -216502306 + (TG)n Simple_repeat Simple_repeat 2 38 0 2927 3 3 0 chr2 34185891 34186205 -216501649 + AluYb8 SINE Alu 1 315 -3 2230 96 3 3 chr2 34187664 34187957 -216499897 + AluY SINE Alu 1 293 -18 1362 198 133 35 chr2 34188406 34188744 -216499110 + MLT1A2 LTR MaLR 4 374 0 1902 164 20 49 chr2 34191149 34191496 -216496358 - MER1B DNA MER1_type 0 337 1 811 199 0 0 chr2 34191570 34191701 -216496153 + FLAM_C SINE Alu 6 136 -7 509 268 84 55 chr2 34191715 34192025 -216495829 - Charlie8 DNA MER1_type -2053 364 46 2022 153 3 10 chr2 34192529 34192843 -216495011 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 34193061 34193083 -216494771 + AT_rich Low_complexity Low_complexity 1 22 0 346 263 0 0 chr2 34193924 34194000 -216493854 + CT-rich Low_complexity Low_complexity 3 78 0 892 239 39 35 chr2 34194116 34194375 -216493479 - MIR SINE MIR 0 262 3 191 306 153 42 chr2 34194745 34194889 -216492965 + L2 LINE L2 3104 3263 -9 1879 128 31 7 chr2 34195240 34195529 -216492325 + AluSx SINE Alu 1 296 -16 201 250 0 0 chr2 34195720 34195768 -216492086 + A-rich Low_complexity Low_complexity 5 52 0 690 132 0 0 chr2 34196674 34196810 -216491044 + (T)n Simple_repeat Simple_repeat 1 136 0 213 288 0 0 chr2 34196813 34196886 -216490968 + T-rich Low_complexity Low_complexity 1 73 0 1588 231 52 30 chr2 34197207 34197648 -216490206 + MLT1C LTR MaLR 5 455 -12 2434 52 7 0 chr2 34197995 34198286 -216489568 - AluY SINE Alu -16 295 3 2170 62 21 95 chr2 34198702 34199040 -216488814 - AluYb8 SINE Alu -5 313 1 1231 164 0 40 chr2 34199154 34199379 -216488475 + L1MB2 LINE L1 5949 6164 -7 304 319 52 37 chr2 34199666 34199801 -216488053 - MER5A DNA MER1_type -3 186 50 * 341 281 44 26 chr2 34199689 34199803 -216488051 + MER5A DNA MER1_type 37 152 -37 364 153 0 0 chr2 34199809 34199868 -216487986 - Alu SINE Alu -2 298 240 2038 139 3 3 chr2 34199908 34200209 -216487645 - AluSg SINE Alu -9 301 1 213 306 59 24 chr2 34200975 34201060 -216486794 + L3 LINE CR1 1488 1575 -2 1829 86 0 0 chr2 34201676 34201908 -216485946 - AluY SINE Alu 0 311 80 463 205 109 32 chr2 34201945 34202101 -216485753 + MLT1E LTR MaLR 1 168 -425 1088 209 110 22 chr2 34202158 34202431 -216485423 - MLT1E LTR MaLR -97 496 200 1943 137 7 13 chr2 34204364 34204671 -216483183 - AluSx SINE Alu -4 308 4 249 229 143 0 chr2 34204796 34204866 -216482988 - L2 LINE L2 -10 3303 3224 1218 338 62 13 chr2 34204878 34205556 -216482298 - L2 LINE L2 -998 2316 1606 1417 164 117 4 chr2 34205873 34206147 -216481707 + AluJb SINE Alu 3 307 -5 1342 184 0 18 chr2 34206482 34206705 -216481149 - MER20 DNA MER1_type 0 219 1 701 165 0 10 chr2 34207787 34207890 -216479964 - AluJb SINE Alu -209 103 2 742 188 0 0 chr2 34207950 34208062 -216479792 - FLAM_A SINE Alu -12 130 19 304 365 54 10 chr2 34208149 34208352 -216479502 + L2 LINE L2 2380 2591 -723 691 227 36 50 chr2 34208478 34208756 -216479098 + L1MC5 LINE L1 7637 7910 -51 237 364 0 80 chr2 34208910 34209061 -216478793 + L2 LINE L2 2957 3095 -177 2049 135 3 25 chr2 34209241 34209580 -216478274 + AluSx SINE Alu 1 332 0 2258 108 3 0 chr2 34210475 34210772 -216477082 - AluSp SINE Alu -15 298 1 252 322 117 2 chr2 34210805 34210971 -216476883 + MIR SINE MIR 3 184 -67 2316 109 0 0 chr2 34211900 34212202 -216475652 + AluSx SINE Alu 1 302 -10 1888 88 8 4 chr2 34213832 34214082 -216473772 + AluY SINE Alu 44 294 -17 180 0 0 0 chr2 34214303 34214323 -216473531 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2270 86 33 0 chr2 34215053 34215356 -216472498 - AluSp SINE Alu 0 313 1 22 56 0 0 chr2 34215745 34215781 -216472073 + AT_rich Low_complexity Low_complexity 1 36 0 2410 71 0 3 chr2 34216096 34216392 -216471462 + AluY SINE Alu 1 295 -16 2314 110 0 0 chr2 34216406 34216707 -216471147 + AluSx SINE Alu 1 301 -11 2380 82 3 3 chr2 34216949 34217255 -216470599 + AluY SINE Alu 1 306 -5 353 304 25 20 chr2 34217267 34217435 -216470419 + MIR SINE MIR 16 182 -61 2545 43 7 3 chr2 34218067 34218367 -216469487 + AluY SINE Alu 1 301 -10 326 256 35 35 chr2 34219328 34219414 -216468440 + HAL1 LINE L1 3 88 -2419 613 167 0 26 chr2 34219416 34219530 -216468324 - L1M3e LINE L1 -6913 117 7 1297 236 64 21 chr2 34219530 34219857 -216467997 - MLT1F LTR MaLR -201 341 1 572 192 33 0 chr2 34220009 34220129 -216467725 - MLT1B LTR MaLR -46 344 221 385 195 23 11 chr2 34220232 34220319 -216467535 - MLT1B LTR MaLR -92 298 211 301 267 35 35 chr2 34220632 34220718 -216467136 + HAL1 LINE L1 3 88 -2419 472 260 13 78 chr2 34220727 34220881 -216466973 + HAL1 LINE L1 410 553 -1954 252 301 19 58 chr2 34221022 34221125 -216466729 - MLT1K LTR MaLR -362 226 128 400 250 203 37 chr2 34222337 34222637 -216465217 - L1MEc LINE L1 -4070 2326 1977 483 225 18 0 chr2 34222701 34222812 -216465042 - L1MA10 LINE L1 -3 6331 6219 1483 147 121 11 chr2 34222998 34223270 -216464584 - AluSg1 SINE Alu -7 302 1 277 313 85 24 chr2 34223735 34223915 -216463939 - MIR SINE MIR -67 141 3 21 57 0 0 chr2 34224417 34224452 -216463402 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 34225079 34225100 -216462754 + AT_rich Low_complexity Low_complexity 1 21 0 2427 57 0 27 chr2 34225234 34225533 -216462321 - AluY SINE Alu -20 291 1 2166 177 6 5 chr2 34225605 34226097 -216461757 - MER67A LTR ERV1 -2 541 1 517 291 62 36 chr2 34226121 34226396 -216461458 + L1MC4a LINE L1 5619 5900 -1908 2074 131 3 3 chr2 34226616 34226914 -216460940 - AluSx SINE Alu -14 298 1 1964 132 11 0 chr2 34227374 34227676 -216460178 - AluSx SINE Alu 0 305 1 2243 94 16 7 chr2 34228466 34228775 -216459079 - AluSx SINE Alu 0 312 1 180 0 0 0 chr2 34229053 34229073 -216458781 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 230 261 0 15 chr2 34229490 34229555 -216458299 + A-rich Low_complexity Low_complexity 4 67 0 2327 94 0 10 chr2 34229691 34229998 -216457856 - AluSg SINE Alu -6 304 1 406 192 0 14 chr2 34230024 34230097 -216457757 + Tigger1 DNA MER2_type 4 75 -2343 207 0 0 0 chr2 34232082 34232105 -216455749 + (A)n Simple_repeat Simple_repeat 1 23 0 734 217 0 0 chr2 34232350 34232493 -216455361 + FRAM SINE Alu 1 140 -36 612 53 69 0 chr2 34232510 34232641 -216455213 + (TA)n Simple_repeat Simple_repeat 1 140 0 835 95 17 0 chr2 34233782 34233898 -216453956 - MER41A LTR ERV1 -265 289 172 195 167 0 0 chr2 34234089 34234131 -216453723 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 3301 100 30 22 chr2 34234438 34235016 -216452838 - MER41A LTR ERV1 0 635 21 1706 142 3 30 chr2 34235016 34235312 -216452542 + AluJb SINE Alu 13 300 -12 2894 3 0 0 chr2 34235819 34236127 -216451727 - AluYa5 SINE Alu -3 308 1 2047 76 0 0 chr2 34236988 34237250 -216450604 - AluY SINE Alu -49 262 1 519 220 262 0 chr2 34237422 34237563 -216450291 + MER45A DNA AcHobo 1 178 0 459 126 147 11 chr2 34238048 34238143 -216449711 - MER53 DNA DNA 0 189 82 447 216 24 0 chr2 34238197 34238322 -216449532 - MER53 DNA DNA -55 134 7 12783 122 38 19 chr2 34238473 34239333 -216448521 - Tigger4(Zombi) DNA MER2_type 0 2731 1889 2068 133 7 0 chr2 34239333 34239633 -216448221 + AluSx SINE Alu 1 302 -10 12783 122 38 19 chr2 34239633 34239714 -216448140 - Tigger4(Zombi) DNA MER2_type -842 1889 1811 2169 93 26 16 chr2 34239714 34240024 -216447830 + AluSq SINE Alu 1 313 0 12783 122 38 19 chr2 34240024 34241103 -216446751 - Tigger4(Zombi) DNA MER2_type -920 1811 672 2254 94 10 19 chr2 34241112 34241419 -216446435 - AluSx SINE Alu -8 304 1 297 217 0 0 chr2 34241421 34241481 -216446373 + Tigger1 DNA MER2_type 2359 2418 0 300 257 18 26 chr2 34241481 34241594 -216446260 - MIR SINE MIR -27 235 124 477 164 58 19 chr2 34241611 34241715 -216446139 - L1MB7 LINE L1 -19 6165 6058 762 164 164 11 chr2 34241722 34241929 -216445925 - MER33 DNA MER1_type -96 228 1 353 260 29 33 chr2 34241942 34242092 -216445762 - L1MD3 LINE L1 0 7995 6206 5045 148 29 14 chr2 34242142 34243788 -216444066 - L1PB1 LINE L1 -3 6148 4476 189 0 0 0 chr2 34244044 34244065 -216443789 + (A)n Simple_repeat Simple_repeat 1 21 0 2074 126 7 0 chr2 34244070 34244372 -216443482 + AluSx SINE Alu 1 304 -8 2102 91 10 10 chr2 34244375 34244673 -216443181 + AluSq SINE Alu 4 301 -12 21 0 0 31 chr2 34244843 34244855 -216442999 + AT_rich Low_complexity Low_complexity 1 12 -19 279 0 0 0 chr2 34244855 34244886 -216442968 + (TG)n Simple_repeat Simple_repeat 2 32 0 21 0 0 31 chr2 34244886 34244905 -216442949 + AT_rich Low_complexity Low_complexity 12 31 0 511 270 51 0 chr2 34245065 34245243 -216442611 - MIR SINE MIR 0 262 76 552 242 22 28 chr2 34245822 34246000 -216441854 - MER5B DNA MER1_type -1 177 1 211 372 41 33 chr2 34248204 34248325 -216439529 - L2 LINE L2 -49 3223 3102 1413 270 58 66 chr2 34248674 34249448 -216438406 + L2 LINE L2 1545 2312 -1002 718 226 37 46 chr2 34249539 34249756 -216438098 + L2 LINE L2 3099 3313 0 373 224 17 43 chr2 34249914 34250030 -216437824 + MLT1J2 LTR MaLR 320 432 -18 363 377 80 14 chr2 34250096 34250372 -216437482 - L2 LINE L2 -2 3270 2977 2284 116 0 0 chr2 34251315 34251626 -216436228 - AluY SINE Alu 0 311 1 188 294 10 108 chr2 34251713 34251815 -216436039 - L2 LINE L2 -44 3228 3137 1004 332 76 23 chr2 34251878 34252714 -216435140 + L2 LINE L2 2391 3271 -1 1658 272 82 52 chr2 34253262 34253356 -216434498 + HAL1 LINE L1 240 330 -2177 1714 191 3 0 chr2 34253356 34253650 -216434204 + AluJo SINE Alu 1 295 -17 1927 108 3 76 chr2 34253650 34253964 -216433890 + AluSx SINE Alu 1 292 -20 1658 272 82 52 chr2 34253964 34254372 -216433482 + HAL1 LINE L1 330 724 -1783 1558 176 74 3 chr2 34254372 34254656 -216433198 - AluJb SINE Alu -8 304 1 1658 272 82 52 chr2 34254656 34255224 -216432630 + HAL1 LINE L1 724 1381 -1126 3753 88 37 45 chr2 34255224 34255811 -216432043 + MER4E LTR ERV1 1 551 -228 2999 66 8 2 chr2 34255811 34256204 -216431650 - L1PA7 LINE L1 0 6154 5760 3753 88 37 45 chr2 34256204 34256432 -216431422 + MER4E LTR ERV1 551 779 0 688 231 71 52 chr2 34256438 34256707 -216431147 + HAL1 LINE L1 1398 1671 -836 2741 126 45 56 chr2 34256758 34257371 -216430483 - MER4B LTR ERV1 -9 770 1 1072 231 112 62 chr2 34257371 34258021 -216429833 + HAL1 LINE L1 1725 2407 -100 23 68 0 0 chr2 34258065 34258109 -216429745 + AT_rich Low_complexity Low_complexity 1 44 0 371 324 119 11 chr2 34258333 34258500 -216429354 - L3 LINE CR1 -8 1569 1381 2109 141 3 0 chr2 34258500 34258806 -216429048 - AluSp SINE Alu -6 307 1 2026 117 37 3 chr2 34258818 34259117 -216428737 - AluSc SINE Alu 0 309 1 1864 95 114 4 chr2 34259122 34259386 -216428468 - AluSg SINE Alu -17 293 1 216 0 0 0 chr2 34260201 34260225 -216427629 + (A)n Simple_repeat Simple_repeat 1 24 0 2289 100 17 7 chr2 34260371 34260672 -216427182 - AluSp SINE Alu -9 304 1 707 286 107 30 chr2 34260776 34261139 -216426715 - L2 LINE L2 0 3313 2923 566 258 194 26 chr2 34261257 34261598 -216426256 + LTR16A LTR ERVL 52 449 -1 1099 191 5 14 chr2 34261646 34261855 -216425999 + AluJo SINE Alu 88 294 -18 2345 72 14 0 chr2 34261910 34262200 -216425654 + AluY SINE Alu 1 294 -17 353 292 164 37 chr2 34262253 34262551 -216425303 + L2 LINE L2 2628 2963 -351 2780 77 0 0 chr2 34262947 34263300 -216424554 - THE1A LTR MaLR -2 353 1 356 316 102 26 chr2 34263752 34263953 -216423901 + MIR SINE MIR 3 214 -48 312 70 0 0 chr2 34266856 34266899 -216420955 + (TTGG)n Simple_repeat Simple_repeat 2 44 0 1792 194 62 60 chr2 34267125 34267629 -216420225 + MLT1D LTR MaLR 1 505 0 895 188 7 0 chr2 34267887 34268041 -216419813 - FRAM SINE Alu -19 157 3 2426 75 0 10 chr2 34268046 34268353 -216419501 - AluY SINE Alu -7 304 1 6983 237 25 61 chr2 34268353 34270402 -216417452 - L1PA13 LINE L1 -4809 1978 3 713 249 69 4 chr2 34270409 34270642 -216417212 - L1M4 LINE L1 -1875 4769 4522 1119 259 97 8 chr2 34270704 34271075 -216416779 - MLT1D LTR MaLR -86 419 16 807 275 27 27 chr2 34271085 34271568 -216416286 - L1M4 LINE L1 -2544 4100 3618 * 2191 234 38 15 chr2 34271558 34272005 -216415849 - L1M4 LINE L1 -4568 2078 1610 2185 131 22 33 chr2 34272005 34272371 -216415483 - THE1B LTR MaLR 0 364 3 2191 234 38 15 chr2 34272371 34272584 -216415270 - L1M4 LINE L1 -5036 1610 1403 792 246 39 0 chr2 34272584 34272791 -216415063 - L1M4 LINE L1 -6314 228 14 1106 217 25 52 chr2 34274801 34275087 -216412767 + L1M4c LINE L1 1598 1875 -5611 * 1659 233 35 41 chr2 34275080 34275242 -216412612 + L1M4c LINE L1 2224 2385 -5182 10118 170 5 1 chr2 34275242 34275699 -216412155 + L1PA14 LINE L1 3337 3791 -2370 2694 93 3 0 chr2 34275699 34276052 -216411802 + THE1A LTR MaLR 2 355 0 11211 97 12 21 chr2 34276052 34277644 -216410210 + THE1A-int LTR MaLR 1 1578 -2 2539 92 20 0 chr2 34277646 34277994 -216409860 + THE1A LTR MaLR 1 355 0 10118 170 5 1 chr2 34277994 34279347 -216408507 + L1PA14 LINE L1 3791 5162 -999 2157 116 13 0 chr2 34279347 34279650 -216408204 + AluSp SINE Alu 1 307 -6 10118 170 5 1 chr2 34279650 34280652 -216407202 + L1PA14 LINE L1 5162 6159 -2 1659 233 35 41 chr2 34280652 34281055 -216406799 + L1M4c LINE L1 2385 2786 -4781 647 206 0 0 chr2 34281061 34281168 -216406686 + FLAM_A SINE Alu 1 107 -35 243 0 0 0 chr2 34281176 34281203 -216406651 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 751 293 61 34 chr2 34281214 34281261 -216406593 + L1MA4 LINE L1 2868 2912 -4653 2370 100 0 0 chr2 34281261 34281560 -216406294 + AluSx SINE Alu 1 299 -13 751 293 61 34 chr2 34281560 34282288 -216405566 + L1MA4 LINE L1 2912 3664 -3901 * 9127 184 37 16 chr2 34282261 34282801 -216405053 + L1MA4 LINE L1 4269 4796 -2794 189 0 0 0 chr2 34282801 34282822 -216405032 + (CCTAA)n Simple_repeat Simple_repeat 5 25 0 9127 184 37 16 chr2 34282822 34284029 -216403825 + L1MA4 LINE L1 4796 5977 -1613 2512 83 0 0 chr2 34284029 34284331 -216403523 - AluY SINE Alu -8 303 2 9127 184 37 16 chr2 34284331 34287171 -216400683 + L1MA4 LINE L1 5977 7587 -3 565 258 148 25 chr2 34287203 34287447 -216400407 - L2 LINE L2 0 3313 3040 2559 261 138 26 chr2 34288868 34289725 -216398129 + MER45C DNA AcHobo 1 953 0 2321 94 7 0 chr2 34290124 34290433 -216397421 + AluSp SINE Alu 1 311 -2 904 39 45 34 chr2 34290846 34291024 -216396830 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 3746 124 68 47 chr2 34291999 34292434 -216395420 - Tigger3(Golem) DNA MER2_type 0 3029 2605 355 45 0 0 chr2 34292434 34292478 -216395376 + (TTTA)n Simple_repeat Simple_repeat 2 108 0 2302 74 3 0 chr2 34292478 34292762 -216395092 - AluSp SINE Alu -1 328 1 3746 124 68 47 chr2 34292762 34292795 -216395059 - Tigger3(Golem) DNA MER2_type -424 2605 2574 2390 85 3 10 chr2 34292795 34293101 -216394753 + AluY SINE Alu 3 306 -5 3746 124 68 47 chr2 34293101 34293290 -216394564 - Tigger3(Golem) DNA MER2_type -455 2574 2352 2074 116 33 7 chr2 34293290 34293592 -216394262 + AluSx SINE Alu 1 310 -2 3746 124 68 47 chr2 34293592 34293640 -216394214 - Tigger3(Golem) DNA MER2_type -677 2352 2306 678 179 0 0 chr2 34293642 34293748 -216394106 - Tigger3(Golem) DNA MER2_type -2923 106 1 1149 276 47 5 chr2 34294233 34294638 -216393216 - Charlie4a DNA MER1_type -6 502 81 709 168 0 67 chr2 34294766 34294915 -216392939 + FRAM SINE Alu 38 176 0 827 165 0 0 chr2 34295121 34295248 -216392606 - FRAM SINE Alu -49 127 1 2015 150 0 0 chr2 34295973 34296273 -216391581 + AluJb SINE Alu 1 300 -12 337 242 121 0 chr2 34296746 34296837 -216391017 - MLT1L LTR MaLR -28 587 486 686 147 9 0 chr2 34296934 34297050 -216390804 - MER97a DNA MER1_type? -725 169 53 25 75 0 0 chr2 34297801 34297854 -216390000 + AT_rich Low_complexity Low_complexity 1 53 0 227 295 65 42 chr2 34299531 34299860 -216387994 + L1MC4a LINE L1 4076 4456 -1690 2064 129 3 3 chr2 34299860 34300154 -216387700 + AluSx SINE Alu 1 294 -18 227 295 65 42 chr2 34300154 34300349 -216387505 + L1MC4a LINE L1 4456 4645 -1501 461 248 16 16 chr2 34300409 34300534 -216387320 + L1MC4a LINE L1 5792 5916 -1892 2006 107 44 0 chr2 34300743 34301060 -216386794 - AluY SINE Alu 0 329 1 912 136 0 0 chr2 34301500 34301625 -216386229 - FLAM_C SINE Alu -6 127 3 1603 181 7 27 chr2 34301910 34302209 -216385645 + AluJb SINE Alu 1 293 -19 219 221 0 35 chr2 34302277 34302363 -216385491 + (TAAA)n Simple_repeat Simple_repeat 2 84 0 307 260 0 14 chr2 34302842 34302915 -216384939 - LTR28 LTR ERV1 0 1020 949 2778 164 81 22 chr2 34302956 34303516 -216384338 - LTR28 LTR ERV1 -446 574 1 10742 132 35 19 chr2 34303517 34305510 -216382344 - LTR17-int LTR ERV1 -1 6995 2244 2452 58 55 0 chr2 34305515 34305824 -216382030 - LTR17 LTR ERV1 -454 326 1 2367 69 3 0 chr2 34305824 34306115 -216381739 - HERV17 LTR ERV1 0 8626 8335 29770 45 14 6 chr2 34306136 34307750 -216380104 - HERV17 LTR ERV1 -2607 6019 4419 2361 98 3 0 chr2 34307750 34308047 -216379807 + AluY SINE Alu 1 298 -13 29770 45 14 6 chr2 34308047 34309994 -216377860 - HERV17 LTR ERV1 -4207 4419 2430 9640 69 6 3 chr2 34309986 34311189 -216376665 - LTR17-int LTR ERV1 -6619 2007 802 * 5418 72 6 18 chr2 34311337 34312042 -216375812 - LTR17-int LTR ERV1 -7930 696 1 3443 86 60 16 chr2 34312042 34312545 -216375309 - LTR17 LTR ERV1 0 780 256 2781 121 0 15 chr2 34312546 34312943 -216374911 - LTR28-int LTR ERV1 -4929 2608 2218 2533 154 21 46 chr2 34312934 34313109 -216374745 - LTR28-int LTR ERV1 -4495 1451 1273 * 3662 24 17 0 chr2 34313109 34313518 -216374336 - L1PA3 LINE L1 0 6155 5740 2533 154 21 46 chr2 34313518 34313816 -216374038 - LTR28-int LTR ERV1 -4673 1273 990 498 195 0 11 chr2 34313816 34313903 -216373951 - LTR28-int LTR ERV1 -885 3995 3910 6953 171 64 30 chr2 34313917 34315315 -216372539 - LTR28-int LTR ERV1 -451 4766 206 364 197 0 15 chr2 34315383 34315449 -216372405 - LTR28 LTR ERV1 -2 1018 954 2763 169 75 24 chr2 34315511 34316060 -216371794 - LTR28 LTR ERV1 -443 577 1 1824 160 0 20 chr2 34316140 34316433 -216371421 + AluJo SINE Alu 1 287 -25 780 28 28 0 chr2 34316490 34316597 -216371257 + (TAGA)n Simple_repeat Simple_repeat 1 110 0 431 254 56 42 chr2 34317453 34317595 -216370259 - MIR SINE MIR -52 210 67 378 226 19 0 chr2 34318245 34318330 -216369524 + MER67A LTR ERV1 4 92 -374 203 122 0 49 chr2 34318523 34318564 -216369290 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 2603 64 0 6 chr2 34318756 34319069 -216368785 - AluY SINE Alu 0 311 1 477 312 91 56 chr2 34319128 34319558 -216368296 - L1M4 LINE L1 -3044 3102 2658 951 248 54 29 chr2 34319579 34319821 -216368033 + MIR SINE MIR 5 252 -10 969 216 120 10 chr2 34319871 34320163 -216367691 - MER33 DNA MER1_type 0 324 1 2407 65 0 10 chr2 34320382 34320688 -216367166 - AluY SINE Alu -8 303 1 2416 86 3 0 chr2 34320710 34321012 -216366842 - AluSp SINE Alu -10 303 1 306 298 21 0 chr2 34321448 34321542 -216366312 + LTR37B LTR ERV1 5 100 -368 844 157 42 30 chr2 34321561 34321727 -216366127 + MER5A DNA MER1_type 2 169 -20 1085 190 51 42 chr2 34321729 34321945 -216365909 + MER20 DNA MER1_type 1 218 -1 451 97 0 0 chr2 34322061 34322118 -216365736 + LTR37B LTR ERV1 198 254 -214 434 186 20 41 chr2 34322118 34322230 -216365624 - MLT1F LTR MaLR -2 540 444 192 77 0 0 chr2 34322750 34322776 -216365078 + (TG)n Simple_repeat Simple_repeat 2 27 0 2029 118 25 4 chr2 34322813 34323093 -216364761 - AluSx SINE Alu -26 286 1 936 175 0 24 chr2 34323143 34323309 -216364545 - FRAM SINE Alu -4 172 11 410 310 19 19 chr2 34323319 34323477 -216364377 - L1MC4 LINE L1 -360 7682 7525 2040 100 14 3 chr2 34324058 34324347 -216363507 - AluY SINE Alu -9 302 11 433 297 55 44 chr2 34324507 34324689 -216363165 - MIR SINE MIR -56 206 23 267 31 0 0 chr2 34325335 34325367 -216362487 + (TG)n Simple_repeat Simple_repeat 2 33 0 838 181 36 91 chr2 34325375 34325596 -216362258 + MER6B DNA MER2_type 2 210 0 210 307 158 0 chr2 34326151 34326252 -216361602 + L2 LINE L2 3146 3262 -10 263 28 28 0 chr2 34327149 34327185 -216360669 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 1918 152 7 10 chr2 34327807 34328110 -216359744 + AluJo SINE Alu 1 302 -10 235 261 14 0 chr2 34328292 34328361 -216359493 + (TA)n Simple_repeat Simple_repeat 2 71 0 2244 130 0 0 chr2 34329011 34329318 -216358536 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr2 34329380 34329401 -216358453 + AT_rich Low_complexity Low_complexity 1 21 0 1126 148 72 55 chr2 34330096 34330333 -216357521 + L1MB7 LINE L1 5943 6183 -1 309 336 89 7 chr2 34331119 34331265 -216356589 - MIR3 SINE MIR -48 160 3 2244 75 3 0 chr2 34331945 34332227 -216355627 - AluY SINE Alu -28 283 1 21 36 0 0 chr2 34332230 34332258 -216355596 + AT_rich Low_complexity Low_complexity 1 28 0 665 184 0 0 chr2 34332273 34332382 -216355472 - FLAM_A SINE Alu -32 110 2 2138 125 0 0 chr2 34332612 34332908 -216354946 - AluSx SINE Alu -16 296 1 230 282 134 74 chr2 34333196 34333345 -216354509 + L3 LINE CR1 922 1079 -498 464 270 79 42 chr2 34333487 34333728 -216354126 + MIR SINE MIR 13 262 0 204 135 0 27 chr2 34334535 34334572 -216353282 + (TG)n Simple_repeat Simple_repeat 1 36 0 26 30 0 0 chr2 34334916 34334949 -216352905 + AT_rich Low_complexity Low_complexity 1 33 0 722 193 0 8 chr2 34334951 34335070 -216352784 - AluJb SINE Alu -194 118 1 2077 130 7 0 chr2 34335457 34335749 -216352105 - AluSx SINE Alu -18 294 1 187 357 132 41 chr2 34336282 34336460 -216351394 - L2 LINE L2 -13 3300 3139 1530 185 6 46 chr2 34336460 34336784 -216351070 + AluJo SINE Alu 1 311 -1 2067 125 0 29 chr2 34336788 34337099 -216350755 + AluSq SINE Alu 1 302 -11 187 357 132 41 chr2 34337099 34337181 -216350673 - L2 LINE L2 -176 3137 3011 380 248 68 53 chr2 34337266 34337472 -216350382 + L1ME LINE L1 4567 4775 -1371 924 171 0 13 chr2 34337655 34337813 -216350041 - FRAM SINE Alu -10 166 11 23 0 0 0 chr2 34337961 34337984 -216349870 + AT_rich Low_complexity Low_complexity 1 23 0 492 272 168 8 chr2 34338078 34338393 -216349461 + L1ME LINE L1 5326 5689 -432 221 167 0 24 chr2 34338401 34338443 -216349411 + (TATG)n Simple_repeat Simple_repeat 3 43 0 237 33 0 0 chr2 34339135 34339165 -216348689 + (GA)n Simple_repeat Simple_repeat 1 30 0 485 16 16 0 chr2 34339175 34339237 -216348617 + (CA)n Simple_repeat Simple_repeat 2 64 0 189 0 0 0 chr2 34339236 34339257 -216348597 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 246 317 54 2 chr2 34340059 34340169 -216347685 + MIR SINE MIR 17 130 -78 2288 112 3 10 chr2 34340191 34340505 -216347349 - AluSx SINE Alu 0 312 1 1747 141 12 56 chr2 34341685 34342005 -216345849 + AluSg SINE Alu 1 306 -4 203 349 73 18 chr2 34342596 34342705 -216345149 - L2 LINE L2 -20 3252 3138 787 274 12 35 chr2 34342813 34343068 -216344786 + MIR SINE MIR 8 256 -6 207 352 38 19 chr2 34343154 34343259 -216344595 - L2 LINE L2 -223 3049 2943 336 210 0 0 chr2 34343637 34343699 -216344155 - L2 LINE L2 -2 3311 3250 601 225 46 26 chr2 34344232 34344383 -216343471 - Charlie8 DNA MER1_type -2244 173 20 540 280 13 7 chr2 34344816 34344966 -216342888 + MIR SINE MIR 53 203 -59 236 324 0 28 chr2 34345725 34345796 -216342058 - L2 LINE L2 -41 3231 3163 216 0 0 0 chr2 34346003 34346027 -216341827 + (A)n Simple_repeat Simple_repeat 1 24 0 201 219 0 0 chr2 34346827 34346868 -216340986 - MIR3 SINE MIR -6 202 162 2265 76 24 3 chr2 34347149 34347437 -216340417 - AluY SINE Alu -17 294 1 233 290 58 0 chr2 34348380 34348449 -216339405 - L2 LINE L2 -18 3254 3182 431 234 88 22 chr2 34349911 34350048 -216337806 + MIR3 SINE MIR 3 148 -60 21 36 0 0 chr2 34350216 34350244 -216337610 + GC_rich Low_complexity Low_complexity 1 28 0 368 347 60 28 chr2 34350366 34350617 -216337237 + L2 LINE L2 1310 1568 -1746 2509 70 0 13 chr2 34350660 34350975 -216336879 - AluY SINE Alu 0 311 1 209 316 33 72 chr2 34352198 34352295 -216335559 + MER5B DNA MER1_type 26 116 -62 2065 87 42 11 chr2 34352295 34352581 -216335273 - AluSc SINE Alu -14 295 1 209 316 33 72 chr2 34352581 34352635 -216335219 + MER5B DNA MER1_type 116 171 -7 2054 99 67 3 chr2 34353431 34353714 -216334140 + AluSc SINE Alu 1 301 -8 1744 151 3 32 chr2 34353714 34353998 -216333856 - AluJo SINE Alu -35 277 1 312 294 159 32 chr2 34354846 34354972 -216332882 + MIR SINE MIR 12 153 -109 1715 129 105 14 chr2 34356704 34356990 -216330864 + AluJb SINE Alu 1 312 0 2183 106 7 0 chr2 34357174 34357467 -216330387 - AluY SINE Alu -16 295 1 1398 232 304 8 chr2 34357773 34358372 -216329482 - LTR50 LTR ERVL -2 793 18 834 259 141 70 chr2 34358754 34359272 -216328582 - MLT1H1 LTR MaLR 0 555 1 2432 83 0 0 chr2 34360048 34360349 -216327505 + AluSx SINE Alu 1 301 -11 2072 173 49 0 chr2 34360913 34361259 -216326595 + MLT1A1 LTR MaLR 3 365 0 2007 123 3 35 chr2 34361298 34361616 -216326238 + AluSg SINE Alu 1 308 -2 2110 78 7 11 chr2 34361621 34361949 -216325905 + AluY SINE Alu 1 327 0 377 213 147 20 chr2 34362122 34362272 -216325582 + MIR SINE MIR 21 189 -73 25 0 0 0 chr2 34362387 34362412 -216325442 + AT_rich Low_complexity Low_complexity 1 25 0 699 225 91 14 chr2 34362616 34362794 -216325060 - MIR3 SINE MIR -6 202 11 312 183 12 37 chr2 34364024 34364106 -216323748 - L2 LINE L2 -1036 2278 2199 406 269 60 30 chr2 34364122 34364256 -216323598 - MER5A DNA MER1_type -2 187 50 535 207 241 0 chr2 34364551 34364696 -216323158 - MER5A DNA MER1_type 0 189 10 341 309 108 7 chr2 34364735 34364874 -216322980 - MIR SINE MIR -3 259 107 2223 65 33 0 chr2 34366111 34366387 -216321467 - AluY SINE Alu -26 285 1 7814 123 38 11 chr2 34366440 34367638 -216320216 + Tigger3b DNA MER2_type 1 1231 0 261 161 161 81 chr2 34367726 34367813 -216320041 - L2 LINE L2 0 3313 3220 2303 97 3 0 chr2 34369296 34369594 -216318260 - AluSg SINE Alu -11 299 1 793 178 81 6 chr2 34369678 34369852 -216318002 + MER53 DNA DNA 3 189 0 1820 152 0 71 chr2 34370999 34371335 -216316519 - AluJb SINE Alu 0 312 1 691 292 21 10 chr2 34371549 34371741 -216316113 - MIR SINE MIR -13 249 56 398 373 7 13 chr2 34372200 34372350 -216315504 - L2 LINE L2 -1 3271 3123 752 232 36 85 chr2 34372662 34372968 -216314886 + L2 LINE L2 3022 3312 -1 227 387 8 16 chr2 34375267 34375391 -216312463 + L3 LINE CR1 1450 1572 -5 214 308 0 0 chr2 34375856 34375908 -216311946 - L2 LINE L2 0 3313 3262 297 346 79 0 chr2 34376174 34376301 -216311553 - L2 LINE L2 -463 2851 2715 2108 119 7 3 chr2 34376310 34376603 -216311251 - AluSx SINE Alu -18 294 1 452 352 73 29 chr2 34377011 34377392 -216310462 + L2 LINE L2 1281 1678 -1636 875 278 51 42 chr2 34377479 34377896 -216309958 + L2 LINE L2 2300 2723 -591 1987 125 3 0 chr2 34377896 34378184 -216309670 + AluSx SINE Alu 1 289 -23 1984 126 7 0 chr2 34378329 34378606 -216309248 - AluSx SINE Alu -33 279 1 473 313 51 20 chr2 34379187 34379382 -216308472 - MIR SINE MIR -12 250 50 2364 75 14 0 chr2 34380124 34380418 -216307436 + AluSp SINE Alu 6 303 -10 342 169 0 0 chr2 34380523 34380588 -216307266 + (ATGGTG)n Simple_repeat Simple_repeat 4 68 0 26 0 0 0 chr2 34381800 34381826 -216306028 + AT_rich Low_complexity Low_complexity 1 26 0 192 204 56 0 chr2 34382418 34382472 -216305382 + MIR SINE MIR 102 158 -104 2151 109 0 52 chr2 34382903 34383232 -216304622 + AluSx SINE Alu 1 312 0 349 239 65 28 chr2 34384061 34384188 -216303666 + MIR SINE MIR 4 135 -73 3267 171 52 3 chr2 34384189 34384761 -216303093 + L1MB7 LINE L1 5524 6123 -61 2376 77 3 0 chr2 34384761 34385060 -216302794 - AluSg SINE Alu -6 304 5 347 252 79 36 chr2 34385507 34385646 -216302208 + MIR SINE MIR 118 262 0 184 349 23 12 chr2 34385714 34385800 -216302054 + MIR3 SINE MIR 118 204 -4 342 0 0 0 chr2 34387664 34387702 -216300152 + (CA)n Simple_repeat Simple_repeat 2 39 0 2766 124 43 24 chr2 34388850 34389108 -216298746 - MSTA LTR MaLR 0 428 157 1544 103 158 48 chr2 34389108 34389381 -216298473 + AluSg1 SINE Alu 1 303 -6 2766 124 43 24 chr2 34389381 34389542 -216298312 - MSTA LTR MaLR -271 157 1 2364 148 0 20 chr2 34389553 34389897 -216297957 + MER1B DNA MER1_type 1 337 0 280 275 132 57 chr2 34390078 34390310 -216297544 + L2 LINE L2 1473 1686 -1628 2264 68 0 68 chr2 34390310 34390631 -216297223 - AluY SINE Alu -12 299 1 280 275 132 57 chr2 34390631 34390801 -216297053 + L2 LINE L2 1686 1905 -1409 311 48 0 0 chr2 34390823 34390865 -216296989 - AluSc SINE Alu -3 296 255 1192 89 6 0 chr2 34390869 34391026 -216296828 - AluSg SINE Alu -142 168 11 227 325 102 64 chr2 34391424 34391581 -216296273 + L2 LINE L2 3110 3272 0 244 303 26 57 chr2 34391708 34391936 -216295918 + L1ME4a LINE L1 2785 3005 -3141 1456 190 0 22 chr2 34392229 34392503 -216295351 + AluJo SINE Alu 1 268 -44 334 273 89 94 chr2 34392514 34393032 -216294822 + L1ME4a LINE L1 3894 4413 -1733 2555 57 0 0 chr2 34393032 34393330 -216294524 + AluY SINE Alu 1 298 -13 334 273 89 94 chr2 34393330 34393945 -216293909 + L1ME4a LINE L1 4413 5021 -1125 2130 116 3 3 chr2 34393956 34394248 -216293606 + AluSx SINE Alu 7 298 -14 1246 273 80 25 chr2 34394538 34395011 -216292843 + L1ME4a LINE L1 5331 5844 -277 2307 92 0 3 chr2 34395011 34395304 -216292550 + AluSc SINE Alu 1 292 -17 1246 273 80 25 chr2 34395304 34395419 -216292435 + L1ME4a LINE L1 5844 5951 -170 609 14 0 0 chr2 34395660 34395730 -216292124 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 374 280 173 7 chr2 34396687 34396837 -216291017 - MIR SINE MIR -69 193 19 370 111 0 0 chr2 34396924 34396978 -216290876 - Tigger1 DNA MER2_type -107 2311 2258 * 5635 104 14 54 chr2 34396976 34397017 -216290837 - Tigger1 DNA MER2_type -700 1718 1677 2219 114 0 0 chr2 34397017 34397314 -216290540 - AluSq SINE Alu -16 297 1 5635 104 14 54 chr2 34397314 34398158 -216289696 - Tigger1 DNA MER2_type -741 1677 869 808 142 0 0 chr2 34398175 34398295 -216289559 - FRAM SINE Alu -17 159 40 4330 124 29 75 chr2 34398295 34398940 -216288914 - Tigger1 DNA MER2_type -1538 880 206 1450 191 25 14 chr2 34398940 34399218 -216288636 + AluJb SINE Alu 1 281 -31 4330 124 29 75 chr2 34399218 34399291 -216288563 - Tigger1 DNA MER2_type -2212 206 131 1932 142 0 4 chr2 34399291 34399572 -216288282 + AluSx SINE Alu 1 280 -32 252 0 0 0 chr2 34399572 34399600 -216288254 + (TAA)n Simple_repeat Simple_repeat 1 28 0 4330 124 29 75 chr2 34399600 34399647 -216288207 - Tigger1 DNA MER2_type -2221 197 149 2139 168 27 37 chr2 34400061 34400530 -216287324 + MER31A LTR ERV1 4 469 -16 957 96 44 0 chr2 34400530 34400665 -216287189 - L1PA12 LINE L1 0 6168 6028 2139 168 27 37 chr2 34400665 34400682 -216287172 + MER31A LTR ERV1 469 485 0 847 296 105 19 chr2 34400725 34401039 -216286815 - L3 LINE CR1 -102 1475 1135 654 233 47 35 chr2 34401916 34402088 -216285766 + MER5B DNA MER1_type 4 177 -1 243 0 0 0 chr2 34402492 34402519 -216285335 + (TC)n Simple_repeat Simple_repeat 2 28 0 1753 161 11 14 chr2 34402519 34402805 -216285049 - AluJo SINE Alu -21 291 7 1734 182 106 34 chr2 34403105 34403440 -216284414 - LTR8A LTR ERV1 -2 725 355 2093 123 3 37 chr2 34403440 34403764 -216284090 + AluSp SINE Alu 1 313 0 1734 182 106 34 chr2 34403764 34403835 -216284019 - LTR8A LTR ERV1 -372 355 290 2246 122 0 13 chr2 34403965 34404277 -216283577 - AluJo SINE Alu -4 308 1 988 119 0 0 chr2 34404832 34404958 -216282896 - FLAM_C SINE Alu -7 126 1 1904 238 69 30 chr2 34405338 34405829 -216282025 + L1M4b LINE L1 11 520 -6339 1033 179 49 0 chr2 34405829 34406013 -216281841 + THE1B LTR MaLR 1 193 -171 * 1140 165 15 92 chr2 34406008 34406268 -216281586 - MER65A LTR ERV1 -204 241 2 2061 259 42 55 chr2 34406268 34406937 -216280917 + L1M4b LINE L1 1412 2088 -4871 2220 153 0 61 chr2 34406937 34407296 -216280558 - MER1B DNA MER1_type 0 337 1 2061 259 42 55 chr2 34407296 34407455 -216280399 + L1M4b LINE L1 2088 2248 -4711 2256 86 0 14 chr2 34407455 34407784 -216280070 + AluSp SINE Alu 1 325 0 2061 259 42 55 chr2 34407784 34407970 -216279884 + L1M4b LINE L1 2248 2415 -4544 1079 253 53 61 chr2 34408129 34408438 -216279416 + L1M4b LINE L1 2473 2783 -4355 2112 149 131 18 chr2 34408438 34408828 -216279026 + Tigger2a DNA MER2_type 1 434 0 1079 253 53 61 chr2 34408828 34409221 -216278633 + L1M4b LINE L1 2783 3169 -3969 1953 134 7 7 chr2 34409233 34409566 -216278288 + AluSx SINE Alu 1 333 0 599 249 80 50 chr2 34409593 34409969 -216277885 + MER21B LTR ERV1 348 806 -57 2263 249 52 30 chr2 34410013 34410456 -216277398 + L1M4b LINE L1 3344 3776 -3181 2602 160 113 66 chr2 34410456 34410859 -216276995 - LTR29 LTR ERV1 0 622 239 180 0 0 0 chr2 34410859 34410879 -216276975 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1617 194 0 7 chr2 34410884 34411162 -216276692 - AluJo SINE Alu -36 276 1 2602 160 113 66 chr2 34411162 34411346 -216276508 - LTR29 LTR ERV1 -386 236 1 2263 249 52 30 chr2 34411346 34411436 -216276418 + L1M4b LINE L1 3776 3863 -3094 2329 105 0 10 chr2 34411436 34411749 -216276105 + AluSx SINE Alu 1 310 -2 2263 249 52 30 chr2 34411749 34412061 -216275793 + L1M4b LINE L1 3863 4209 -2748 717 131 10 0 chr2 34412082 34412181 -216275673 - FLAM_C SINE Alu -18 125 26 1802 112 0 0 chr2 34412214 34412455 -216275399 + AluSq SINE Alu 1 241 -72 227 225 110 75 chr2 34412473 34412646 -216275208 - LTR16A1 LTR ERVL -219 238 60 316 308 30 15 chr2 34412728 34412861 -216274993 - MIR SINE MIR -28 234 100 2101 134 0 3 chr2 34412882 34413180 -216274674 + AluSx SINE Alu 1 297 -15 232 170 38 0 chr2 34413484 34413537 -216274317 + AluSq SINE Alu 247 301 -1 893 252 62 0 chr2 34413689 34413947 -216273907 - MLT1L LTR MaLR -72 543 270 216 396 0 0 chr2 34414473 34414637 -216273217 + (CCA)n Simple_repeat Simple_repeat 3 166 0 834 266 95 4 chr2 34415310 34415573 -216272281 - MLT1L LTR MaLR -326 289 3 1549 189 47 39 chr2 34416541 34416604 -216271250 + MLT1A1 LTR MaLR 3 64 -301 2182 132 3 0 chr2 34416604 34416915 -216270939 + AluSx SINE Alu 1 312 0 1549 189 47 39 chr2 34416915 34417211 -216270643 + MLT1A1 LTR MaLR 64 365 0 361 68 0 0 chr2 34418409 34418453 -216269401 + MER57B LTR ERV1 326 369 -65 195 224 75 30 chr2 34418720 34418787 -216269067 - L2 LINE L2 -100 3213 3144 762 211 8 0 chr2 34419423 34419556 -216268298 + AluJo SINE Alu 3 136 -176 421 144 22 0 chr2 34419664 34419754 -216268100 + GA-rich Low_complexity Low_complexity 3 94 0 470 106 0 0 chr2 34419767 34419833 -216268021 + L1MB4 LINE L1 5863 5928 -252 701 168 8 8 chr2 34419848 34419967 -216267887 - FLAM_A SINE Alu -3 139 21 271 207 19 67 chr2 34419993 34420119 -216267735 + MLT2B2 LTR ERVL 260 474 -41 255 103 0 0 chr2 34420119 34420158 -216267696 + (CA)n Simple_repeat Simple_repeat 2 40 0 271 207 19 67 chr2 34420158 34420199 -216267655 + MLT2B2 LTR ERVL 474 515 0 1507 156 12 8 chr2 34420199 34420456 -216267398 + L1MB3 LINE L1 5925 6182 -1 389 272 34 7 chr2 34420519 34420666 -216267188 + HAL1 LINE L1 1312 1462 -1045 3294 142 19 0 chr2 34420797 34421361 -216266493 + L1 LINE L1 4072 4646 -1500 256 310 124 16 chr2 34421599 34421728 -216266126 + MIR3 SINE MIR 18 160 -48 2289 136 91 18 chr2 34422016 34422413 -216265441 - MSTA LTR MaLR -2 426 1 2320 112 0 0 chr2 34423836 34424140 -216263714 + AluSx SINE Alu 1 304 -8 390 264 145 68 chr2 34424613 34425116 -216262738 + MER34 LTR ERV1 1 542 0 23 33 0 0 chr2 34425293 34425323 -216262531 + AT_rich Low_complexity Low_complexity 1 30 0 1080 224 53 99 chr2 34426841 34427346 -216260508 - MER34 LTR ERV1 0 542 61 282 109 22 43 chr2 34427334 34427399 -216260455 + Alu SINE Alu 242 301 0 * 927 268 53 0 chr2 34427518 34427764 -216260090 - MIR SINE MIR 0 262 4 218 250 0 0 chr2 34427930 34427978 -216259876 - MIR SINE MIR -10 252 205 894 239 42 78 chr2 34427985 34428200 -216259654 + L1ME LINE L1 5384 5584 -580 1624 167 47 23 chr2 34428200 34428499 -216259355 + AluJo SINE Alu 1 306 -6 894 239 42 78 chr2 34428499 34428618 -216259236 + L1ME LINE L1 5584 5706 -458 * 1455 191 56 14 chr2 34428607 34428962 -216258892 - L1ME3A LINE L1 -12 6158 5789 580 314 68 48 chr2 34428971 34429325 -216258529 + HERVL LTR ERVL 1882 2242 -3412 21 0 0 0 chr2 34429545 34429566 -216258288 + AT_rich Low_complexity Low_complexity 1 21 0 2298 91 13 0 chr2 34429575 34429882 -216257972 - AluSq SINE Alu -2 311 1 1266 195 56 28 chr2 34429888 34430175 -216257679 - AluJo SINE Alu -17 295 1 2374 81 0 0 chr2 34430283 34430580 -216257274 - AluY SINE Alu -14 297 1 379 319 117 50 chr2 34431146 34431309 -216256545 + L2 LINE L2 2098 2249 -1065 1876 161 17 0 chr2 34431309 34431601 -216256253 - AluJb SINE Alu -15 297 1 379 319 117 50 chr2 34431601 34431813 -216256041 + L2 LINE L2 2249 2498 -816 2336 164 102 9 chr2 34432167 34432589 -216255265 + LOR1b LTR ERV1 1 461 0 2083 145 44 8 chr2 34433119 34433484 -216254370 + LTR24C LTR ERV1 1 378 -257 23734 141 56 70 chr2 34433499 34434165 -216253689 - LTR8A-int LTR ERV1 -102 6161 5487 5342 78 34 3 chr2 34434165 34434834 -216253020 + LTR8 LTR ERV1 2 691 0 23734 141 56 70 chr2 34434834 34440035 -216247819 - LTR8A-int LTR ERV1 -776 5487 1 2832 183 66 52 chr2 34440035 34440307 -216247547 - LTR8A LTR ERV1 0 727 460 5015 116 30 11 chr2 34440307 34441072 -216246782 + LTR17 LTR ERV1 1 780 0 2832 183 66 52 chr2 34441072 34441349 -216246505 - LTR8A LTR ERV1 -267 460 163 3716 100 47 4 chr2 34441349 34441839 -216246015 - MER9 LTR ERVK 0 511 1 2832 183 66 52 chr2 34441839 34442005 -216245849 - LTR8A LTR ERV1 -564 163 1 706 250 60 33 chr2 34442122 34442306 -216245548 + MER5A DNA MER1_type 1 189 0 549 171 96 20 chr2 34442357 34442503 -216245351 - MER105 DNA DNA -44 160 4 2847 118 52 64 chr2 34442553 34443169 -216244685 - MER4B LTR ERV1 0 779 1 3423 135 74 45 chr2 34443900 34444570 -216243284 + LTR8A LTR ERV1 1 691 0 1871 140 3 16 chr2 34444703 34445011 -216242843 + AluJb SINE Alu 1 304 -8 247 292 73 21 chr2 34445092 34445188 -216242666 + MER5A DNA MER1_type 88 188 -1 577 224 34 54 chr2 34445283 34445430 -216242424 + LTR8 LTR ERV1 1 144 -547 2648 51 0 0 chr2 34445580 34445891 -216241963 + AluY SINE Alu 1 311 0 262 253 46 23 chr2 34445966 34446053 -216241801 + LTR8A LTR ERV1 290 378 -349 579 251 86 38 chr2 34446084 34446351 -216241503 + LTR8A LTR ERV1 448 727 0 314 337 135 34 chr2 34446429 34446696 -216241158 - L2 LINE L2 -158 3114 2821 408 254 61 56 chr2 34446822 34447035 -216240819 - Charlie8 DNA MER1_type -2168 249 36 242 259 0 0 chr2 34447236 34447290 -216240564 + (TG)n Simple_repeat Simple_repeat 1 54 0 207 0 0 0 chr2 34447291 34447314 -216240540 + (TA)n Simple_repeat Simple_repeat 2 24 0 23 33 0 0 chr2 34447872 34447902 -216239952 + AT_rich Low_complexity Low_complexity 1 30 0 1723 195 107 19 chr2 34448109 34448540 -216239314 + MLT1D LTR MaLR 21 489 -16 22 0 0 0 chr2 34448594 34448616 -216239238 + AT_rich Low_complexity Low_complexity 1 22 0 1424 153 94 21 chr2 34448689 34448976 -216238878 + AluJb SINE Alu 1 308 -4 812 165 0 23 chr2 34449749 34449882 -216237972 - FLAM_C SINE Alu -13 130 1 480 263 19 39 chr2 34449971 34450127 -216237727 - L3 LINE CR1 -67 1510 1358 221 354 39 23 chr2 34450821 34450951 -216236903 + MIR SINE MIR 20 151 -111 2604 64 0 0 chr2 34451070 34451381 -216236473 + AluY SINE Alu 1 311 0 749 183 0 0 chr2 34454689 34454820 -216233034 - FLAM_A SINE Alu -2 131 1 256 224 0 0 chr2 34454841 34454890 -216232964 + L2 LINE L2 3265 3313 0 2374 83 0 3 chr2 34455122 34455423 -216232431 - AluY SINE Alu -11 300 1 26 0 0 0 chr2 34455612 34455638 -216232216 + AT_rich Low_complexity Low_complexity 1 26 0 289 173 8 38 chr2 34455829 34455957 -216231897 + AluJo SINE Alu 87 292 -10 180 0 0 0 chr2 34457306 34457326 -216230528 + (TG)n Simple_repeat Simple_repeat 2 21 0 342 273 23 0 chr2 34457328 34457416 -216230438 + L1MC4 LINE L1 6614 6703 -1339 291 54 0 0 chr2 34457419 34457456 -216230398 + (TG)n Simple_repeat Simple_repeat 2 38 0 1766 115 19 0 chr2 34457486 34457755 -216230099 - L1PA8A LINE L1 0 6131 5858 784 231 113 29 chr2 34457836 34458074 -216229780 - MIR SINE MIR -3 259 2 1868 161 3 3 chr2 34458612 34458911 -216228943 - AluSx SINE Alu -13 299 1 315 346 69 23 chr2 34458985 34459202 -216228652 - L2 LINE L2 -206 3066 2840 1529 204 13 23 chr2 34459364 34459668 -216228186 + AluJo SINE Alu 5 305 -7 981 176 11 0 chr2 34462112 34462288 -216225566 - MER58A DNA MER1_type 0 224 47 386 148 16 0 chr2 34464448 34464509 -216223345 - L2 LINE L2 0 3313 3252 251 203 0 0 chr2 34467060 34467119 -216220735 + (TGG)n Simple_repeat Simple_repeat 1 59 0 4555 105 3 5 chr2 34469340 34469998 -216217856 - L1PA14 LINE L1 -17 6144 5488 2258 103 7 0 chr2 34471253 34471563 -216216291 + AluSq SINE Alu 1 312 -1 204 182 146 18 chr2 34471572 34471627 -216216227 - L2 LINE L2 -5 3267 3206 183 336 157 21 chr2 34472184 34472419 -216215435 - L2 LINE L2 -1035 2279 2013 442 275 23 23 chr2 34472478 34472609 -216215245 - MIR SINE MIR -104 158 28 1003 172 92 44 chr2 34472802 34473029 -216214825 - MER8 DNA MER2_type -1 238 1 1530 151 40 4 chr2 34473262 34473514 -216214340 - AluJo SINE Alu -51 261 1 344 292 155 12 chr2 34474140 34474301 -216213553 + MIR SINE MIR 62 245 -17 1849 138 10 7 chr2 34474720 34475016 -216212838 - AluSc SINE Alu -12 297 1 1508 147 88 53 chr2 34475091 34475376 -216212478 + AluJo SINE Alu 1 295 -17 2159 106 16 0 chr2 34475379 34475682 -216212172 + AluSx SINE Alu 1 308 -4 227 180 60 0 chr2 34475799 34475849 -216212005 + Charlie2a DNA MER1_type 82 134 -2728 850 221 53 0 chr2 34475971 34476197 -216211657 + Charlie2a DNA MER1_type 733 970 -1892 183 311 95 0 chr2 34476464 34476538 -216211316 + MIR3 SINE MIR 6 86 -122 180 77 0 0 chr2 34476677 34476703 -216211151 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2310 96 0 0 chr2 34476706 34476998 -216210856 - AluSq SINE Alu -21 292 1 435 298 57 8 chr2 34477186 34477451 -216210403 - L1MC4a LINE L1 -1857 5951 5674 628 259 146 0 chr2 34477486 34477671 -216210183 + MIR SINE MIR 19 230 -32 540 290 94 47 chr2 34477725 34477937 -216209917 - L1MC4a LINE L1 -2154 5654 5415 1656 149 47 24 chr2 34477937 34478233 -216209621 - AluJb SINE Alu -9 303 1 540 290 94 47 chr2 34478233 34478403 -216209451 - L1MC4a LINE L1 -2393 5415 5254 854 326 96 49 chr2 34478887 34479547 -216208307 - L1MC4a LINE L1 -1404 4742 4033 1552 166 50 14 chr2 34479547 34479825 -216208029 + AluJb SINE Alu 5 292 -20 854 326 96 49 chr2 34479825 34480002 -216207852 - L1MC4a LINE L1 -2113 4033 3866 1391 111 43 5 chr2 34530069 34530276 -216157578 + AluSp SINE Alu 84 298 -15 2055 101 30 7 chr2 34530468 34530765 -216157089 + AluSg SINE Alu 1 304 -6 32 0 0 0 chr2 34531333 34531365 -216156489 + AT_rich Low_complexity Low_complexity 1 32 0 4165 133 25 2 chr2 34531456 34532085 -216155769 - L1PA15 LINE L1 -8 6157 5514 * 8045 24 1 9 chr2 34532084 34533751 -216154103 - L1PA4 LINE L1 0 6155 4488 860 143 0 8 chr2 34534025 34534151 -216153703 - FLAM_C SINE Alu -18 125 1 468 310 52 24 chr2 34535458 34535671 -216152183 + L2 LINE L2 411 629 -2685 22 0 0 0 chr2 34535692 34535714 -216152140 + AT_rich Low_complexity Low_complexity 1 22 0 2236 79 38 0 chr2 34535774 34536065 -216151789 + AluY SINE Alu 1 302 -9 1081 111 25 30 chr2 34536066 34536264 -216151590 + AluY SINE Alu 1 197 -114 4205 206 2 16 chr2 34536365 34537241 -216150613 - L1P LINE L1 -1158 4988 4125 2470 83 0 0 chr2 34537436 34537737 -216150117 + AluY SINE Alu 1 301 -10 235 260 110 45 chr2 34537741 34537895 -216149959 - L1ME3A LINE L1 -222 5948 5785 454 260 27 41 chr2 34538607 34538753 -216149101 + MIR SINE MIR 13 156 -106 2000 158 38 20 chr2 34538762 34539109 -216148745 + MLT1A1 LTR MaLR 2 354 -11 571 253 0 31 chr2 34539326 34539488 -216148366 + MER103 DNA DNA 8 164 -2 26 30 0 0 chr2 34539810 34539843 -216148011 + AT_rich Low_complexity Low_complexity 1 33 0 324 103 0 0 chr2 34540781 34540839 -216147015 + (TC)n Simple_repeat Simple_repeat 1 58 0 2756 101 25 3 chr2 34542198 34542565 -216145289 + THE1C LTR MaLR 1 375 0 947 223 167 37 chr2 34543086 34543409 -216144445 - MLT1A1 LTR MaLR 0 365 1 271 303 18 115 chr2 34543556 34543721 -216144133 - MIR3 SINE MIR -51 157 9 334 308 75 8 chr2 34544342 34544475 -216143379 - MIR SINE MIR -28 234 93 243 115 7 79 chr2 34545200 34545339 -216142515 + (CCCCCA)n Simple_repeat Simple_repeat 4 132 0 331 270 127 0 chr2 34546040 34546166 -216141688 - MIR SINE MIR -3 259 118 2085 125 0 10 chr2 34546246 34546543 -216141311 + AluSx SINE Alu 1 294 -18 192 214 20 122 chr2 34547280 34547378 -216140476 + MIR SINE MIR 123 210 -52 2180 125 0 3 chr2 34547512 34547824 -216140030 + AluSx SINE Alu 1 311 -1 22 80 0 0 chr2 34547970 34548020 -216139834 + AT_rich Low_complexity Low_complexity 1 50 0 269 221 48 55 chr2 34548169 34548286 -216139568 - L1ME LINE L1 -318 5844 5724 448 190 90 0 chr2 34548614 34548714 -216139140 + MER53 DNA DNA 1 109 -80 520 117 43 32 chr2 34548800 34548894 -216138960 + MER53 DNA DNA 95 189 0 2119 116 7 13 chr2 34549043 34549346 -216138508 + AluSq SINE Alu 1 301 -12 853 178 0 0 chr2 34549400 34549529 -216138325 + FLAM_C SINE Alu 5 133 0 2210 129 3 0 chr2 34549564 34549875 -216137979 + AluSx SINE Alu 1 312 0 192 40 0 0 chr2 34550005 34550030 -216137824 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2179 94 35 0 chr2 34550068 34550355 -216137499 + AluY SINE Alu 1 297 -14 183 200 89 0 chr2 34550415 34550460 -216137394 - MIR SINE MIR -131 131 83 1518 154 4 4 chr2 34550526 34550772 -216137082 - Tigger5 DNA MER2_type 0 2323 2078 240 216 59 0 chr2 34550762 34550813 -216137041 - Tigger5 DNA MER2_type -2244 79 26 * 321 348 50 7 chr2 34551505 34551646 -216136208 + L3 LINE CR1 1429 1575 -2 241 83 0 0 chr2 34551994 34552030 -216135824 - Alu SINE Alu -4 298 263 1091 100 13 7 chr2 34552031 34552181 -216135673 - AluSq/x SINE Alu -161 151 1 4323 109 225 3 chr2 34552707 34553383 -216134471 + LTR12 LTR ERV1 1 826 0 1899 120 0 4 chr2 34553383 34553649 -216134205 + AluSq SINE Alu 31 295 -18 2154 95 3 0 chr2 34554196 34554481 -216133373 + AluY SINE Alu 1 286 -25 1350 273 111 21 chr2 34554559 34555339 -216132515 - L1MC4a LINE L1 -1 6120 5280 282 312 58 0 chr2 34555761 34555915 -216131939 - L1MC4a LINE L1 -1302 4844 4682 311 258 69 38 chr2 34556028 34556187 -216131667 - L1ME LINE L1 -395 5709 5546 1201 231 45 132 chr2 34556223 34556867 -216130987 - MLT1E LTR MaLR -4 589 2 2288 70 37 13 chr2 34557029 34557328 -216130526 - AluY SINE Alu -3 308 3 251 224 121 0 chr2 34557980 34558038 -216129816 + MIR SINE MIR 82 146 -116 416 329 30 6 chr2 34558159 34558323 -216129531 - L3 LINE CR1 -159 1418 1251 330 384 82 25 chr2 34558959 34559396 -216128458 - L2 LINE L2 -5 3267 2806 725 307 110 49 chr2 34559793 34560301 -216127553 - MLT1K LTR MaLR -37 551 13 2396 76 3 7 chr2 34560927 34561229 -216126625 + AluY SINE Alu 1 301 -10 2022 154 7 0 chr2 34561494 34561800 -216126054 - AluSx SINE Alu -4 308 1 245 174 252 0 chr2 34562035 34562150 -216125704 - L1M LINE L1 -770 5408 5265 487 301 48 60 chr2 34562171 34562653 -216125201 - L1ME LINE L1 -937 5192 4717 1599 258 141 36 chr2 34562677 34562971 -216124883 - L1MC4 LINE L1 -116 7926 7664 2369 86 0 7 chr2 34562971 34563274 -216124580 - AluSc SINE Alu -8 301 1 1599 258 141 36 chr2 34563274 34563354 -216124500 - L1MC4 LINE L1 -378 7664 7594 2297 91 7 0 chr2 34563354 34563641 -216124213 - AluSc SINE Alu -20 289 1 1599 258 141 36 chr2 34563641 34563983 -216123871 - L1MC4 LINE L1 -448 7594 7134 526 301 156 43 chr2 34564056 34564852 -216123002 - L1ME LINE L1 -5232 887 2 1527 40 0 0 chr2 34565075 34565248 -216122606 + L1PA4 LINE L1 5979 6151 -4 197 132 26 0 chr2 34565450 34565488 -216122366 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 1864 115 80 3 chr2 34566075 34566362 -216121492 + AluSc SINE Alu 1 309 0 21 0 0 0 chr2 34566807 34566828 -216121026 + AT_rich Low_complexity Low_complexity 1 21 0 845 193 60 0 chr2 34568155 34568321 -216119533 - AluJo SINE Alu 0 312 137 207 314 0 0 chr2 34568330 34568381 -216119473 - MIR SINE MIR -119 143 93 216 276 66 79 chr2 34569087 34569239 -216118615 + L2 LINE L2 3164 3313 0 331 224 111 105 chr2 34569711 34569984 -216117870 - L1ME4a LINE L1 0 6121 5838 2245 91 0 3 chr2 34569984 34570294 -216117560 - AluSq SINE Alu 0 309 1 331 224 111 105 chr2 34570294 34570515 -216117339 - L1ME4a LINE L1 -283 5838 5620 1696 191 19 41 chr2 34570642 34571008 -216116846 - MSTD LTR MaLR 0 396 39 227 130 0 22 chr2 34571008 34571054 -216116800 + (TTCC)n Simple_repeat Simple_repeat 3 47 0 183 156 0 0 chr2 34571060 34571092 -216116762 + C-rich Low_complexity Low_complexity 2 33 0 1730 159 32 44 chr2 34571092 34571407 -216116447 - AluJo SINE Alu -1 311 1 263 122 102 0 chr2 34571407 34571456 -216116398 - MSTD LTR MaLR -373 55 2 1271 166 11 42 chr2 34571546 34571638 -216116216 + L1MA4 LINE L1 6021 6114 -186 2477 128 90 3 chr2 34571638 34572028 -216115826 - MSTA LTR MaLR -4 424 1 1271 166 11 42 chr2 34572028 34572219 -216115635 + L1MA4 LINE L1 6114 6295 -5 1929 230 132 54 chr2 34572568 34573184 -216114670 - L1MC4 LINE L1 -103 7705 7138 748 175 15 44 chr2 34573184 34573321 -216114533 - AluJo SINE Alu -169 133 1 1929 230 132 54 chr2 34573321 34573745 -216114109 - L1MC4 LINE L1 -670 7138 6748 234 62 0 0 chr2 34573745 34573777 -216114077 + (CA)n Simple_repeat Simple_repeat 2 33 0 1929 230 132 54 chr2 34573777 34573824 -216114030 - L1MC4 LINE L1 -1060 6748 6706 2608 33 3 0 chr2 34573824 34574127 -216113727 + AluY SINE Alu 8 311 0 1929 230 132 54 chr2 34574127 34574138 -216113716 - L1MC4 LINE L1 -1102 6706 6697 2307 103 0 0 chr2 34574138 34574440 -216113414 + AluSc SINE Alu 1 302 -7 1929 230 132 54 chr2 34574440 34574540 -216113314 - L1MC4 LINE L1 -1111 6697 6606 2346 76 0 52 chr2 34574540 34574868 -216112986 - AluY SINE Alu 0 311 1 1929 230 132 54 chr2 34574868 34574943 -216112911 - L1MC4 LINE L1 -1202 6606 6441 207 319 24 18 chr2 34575742 34575908 -216111946 - L2 LINE L2 -1210 2104 1938 490 303 44 26 chr2 34575949 34576166 -216111688 - MIR SINE MIR -14 248 20 276 323 71 0 chr2 34576237 34576336 -216111518 + L3 LINE CR1 1415 1520 -57 508 113 0 0 chr2 34576450 34576521 -216111333 - AluJ/FRAM SINE Alu -9 303 233 2165 101 0 66 chr2 34576710 34577028 -216110826 - AluSq SINE Alu -16 297 1 265 360 50 0 chr2 34577668 34577768 -216110086 + L2 LINE L2 3151 3255 -17 22 0 0 0 chr2 34577959 34577981 -216109873 + AT_rich Low_complexity Low_complexity 1 22 0 2153 88 7 20 chr2 34578042 34578339 -216109515 + AluSp SINE Alu 15 307 -6 1914 127 0 20 chr2 34579265 34579565 -216108289 - AluY SINE Alu -16 295 2 1913 148 3 10 chr2 34581107 34581418 -216106436 + AluSx SINE Alu 1 309 -3 226 375 48 0 chr2 34581695 34581799 -216106055 - L2 LINE L2 -13 3259 3151 2229 112 0 0 chr2 34581890 34582185 -216105669 + AluSg SINE Alu 14 308 -2 195 274 110 0 chr2 34582299 34582372 -216105482 + MIR SINE MIR 138 218 -44 21 0 0 0 chr2 34582931 34582952 -216104902 + AT_rich Low_complexity Low_complexity 1 21 0 258 231 0 0 chr2 34583205 34583257 -216104597 + LTR30 LTR ERV1 1 52 -670 1850 137 39 152 chr2 34583257 34583739 -216104115 + LTR12 LTR ERV1 53 480 -234 207 321 83 0 chr2 34583743 34583852 -216104002 + MIR SINE MIR 144 261 -1 2498 66 0 3 chr2 34585018 34585322 -216102532 + AluY SINE Alu 1 303 -8 872 90 0 0 chr2 34585423 34585534 -216102320 + AluSg/x SINE Alu 198 308 -4 225 0 0 0 chr2 34585768 34585793 -216102061 + (T)n Simple_repeat Simple_repeat 1 25 0 216 0 0 0 chr2 34586024 34586048 -216101806 + (A)n Simple_repeat Simple_repeat 1 24 0 1317 159 34 29 chr2 34586285 34586524 -216101330 - AluJo SINE Alu -6 306 67 4191 87 14 35 chr2 34587575 34587750 -216100104 + MER41A LTR ERV1 1 178 -376 2293 85 14 3 chr2 34587750 34588043 -216099811 + AluSq SINE Alu 1 296 -17 4191 87 14 35 chr2 34588043 34588264 -216099590 + MER41A LTR ERV1 178 384 -170 2567 59 0 0 chr2 34588264 34588568 -216099286 + AluYa5 SINE Alu 1 304 -7 4191 87 14 35 chr2 34588568 34588736 -216099118 + MER41A LTR ERV1 384 554 0 1747 201 124 22 chr2 34588777 34589229 -216098625 + MLT1D LTR MaLR 8 505 0 1599 150 41 17 chr2 34589562 34589856 -216097998 + AluJo SINE Alu 1 301 -11 1553 141 54 71 chr2 34590107 34590313 -216097541 + L1MA8 LINE L1 5929 6137 -154 2385 84 0 3 chr2 34590313 34590609 -216097245 - AluY SINE Alu -16 295 1 1553 141 54 71 chr2 34590609 34590667 -216097187 + L1MA8 LINE L1 6137 6194 -97 2146 207 52 7 chr2 34590667 34591107 -216096747 - LOR1b LTR ERV1 0 461 2 1553 141 54 71 chr2 34591107 34591209 -216096645 + L1MA8 LINE L1 6194 6290 -1 1525 192 39 51 chr2 34591232 34591644 -216096210 + MLT1C LTR MaLR 53 459 -8 2188 132 0 0 chr2 34591681 34591991 -216095863 - AluSx SINE Alu -2 310 1 571 230 121 24 chr2 34592104 34592352 -216095502 - L1MEc LINE L1 -4032 2364 2093 607 211 7 7 chr2 34592352 34592504 -216095350 + (TA)n Simple_repeat Simple_repeat 1 152 0 479 280 21 69 chr2 34592521 34592710 -216095144 - AluYb8 SINE Alu -60 258 79 2013 126 0 0 chr2 34593020 34593297 -216094557 - AluSx SINE Alu -35 277 1 606 230 117 20 chr2 34593410 34593658 -216094196 - L1MEc LINE L1 -4032 2575 2304 321 311 0 0 chr2 34593685 34593775 -216094079 + L1MC4 LINE L1 6614 6703 -1339 2383 78 0 29 chr2 34593782 34594089 -216093765 - AluY SINE Alu -13 298 1 395 280 116 18 chr2 34594093 34594339 -216093515 - L1MEc LINE L1 -4181 2287 2043 329 270 45 0 chr2 34594575 34594664 -216093190 + MIR3 SINE MIR 106 198 -10 928 229 92 4 chr2 34595567 34595794 -216092060 + MER58 DNA MER1_type 1 247 -2173 1779 145 0 25 chr2 34596538 34596820 -216091034 - AluJb SINE Alu -18 294 20 246 108 27 0 chr2 34596846 34596883 -216090971 - MSTB1 LTR MaLR 0 432 395 2060 125 0 3 chr2 34596884 34597171 -216090683 + AluSx SINE Alu 1 286 -26 313 322 0 0 chr2 34597182 34597272 -216090582 - L1MC4 LINE L1 -1339 6703 6614 * 318 304 0 0 chr2 34597195 34597287 -216090567 + L1MC4 LINE L1 6615 6706 -1336 2098 203 25 10 chr2 34597288 34597682 -216090172 - MSTB1 LTR MaLR -32 400 1 198 339 0 0 chr2 34598494 34598550 -216089304 + MIR SINE MIR 13 68 -194 351 260 72 61 chr2 34598730 34598911 -216088943 + MLT1J1 LTR MaLR 264 446 0 350 366 68 26 chr2 34599424 34599615 -216088239 - MIR3 SINE MIR -4 204 6 210 250 0 0 chr2 34599787 34599827 -216088027 + MIR SINE MIR 217 256 -6 261 310 35 23 chr2 34600018 34600192 -216087662 + L1MEc LINE L1 348 523 -6198 454 268 24 18 chr2 34600296 34600460 -216087394 + L1MEc LINE L1 1828 1992 -4548 905 251 52 55 chr2 34600550 34600877 -216086977 + MER58B DNA MER1_type 1 326 -15 2627 92 5 24 chr2 34601090 34601472 -216086382 - THE1C LTR MaLR 0 375 1 776 238 6 6 chr2 34601502 34601670 -216086184 - MLT1A2 LTR MaLR -1 373 206 932 232 89 6 chr2 34601800 34602136 -216085718 + L1MEc LINE L1 3005 3368 -3172 6036 143 28 8 chr2 34602140 34603577 -216084277 + L1MA5A LINE L1 4823 6287 -10 32 43 0 0 chr2 34603577 34603623 -216084231 + AT_rich Low_complexity Low_complexity 1 46 0 600 180 19 115 chr2 34603623 34603748 -216084106 + L1MEc LINE L1 3358 3447 -3093 1252 56 0 0 chr2 34603748 34603909 -216083945 + L1PA4 LINE L1 5992 6152 -3 600 180 19 115 chr2 34603909 34604044 -216083810 + L1MEc LINE L1 3447 3593 -2947 368 190 24 0 chr2 34604104 34604200 -216083654 + L1MEc LINE L1 2133 2270 -3918 840 48 0 0 chr2 34604201 34604306 -216083548 + (GGAA)n Simple_repeat Simple_repeat 2 106 0 216 67 0 0 chr2 34604510 34604540 -216083314 + (GGGGA)n Simple_repeat Simple_repeat 2 31 0 1191 233 117 4 chr2 34604571 34605031 -216082823 + L1MEc LINE L1 2231 2742 -3404 25 51 0 0 chr2 34605031 34605070 -216082784 + AT_rich Low_complexity Low_complexity 1 39 0 2266 72 4 0 chr2 34607462 34607777 -216080077 - AluY SINE Alu 0 316 1 267 235 15 0 chr2 34607803 34607871 -216079983 + L1PA16 LINE L1 6077 6145 -21 186 43 0 0 chr2 34608889 34608912 -216078942 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 727 251 156 57 chr2 34609273 34609644 -216078210 - MLT1C LTR MaLR -59 408 1 270 208 0 0 chr2 34609935 34609988 -216077866 + L2 LINE L2 3261 3313 0 798 188 0 0 chr2 34610028 34610161 -216077693 + FLAM_A SINE Alu 1 133 0 2643 149 76 24 chr2 34610724 34611301 -216076553 + pTR5 LTR ERV1 738 1344 -1094 4835 103 12 120 chr2 34611317 34612239 -216075615 + LTR12 LTR ERV1 5 826 0 237 373 51 8 chr2 34612240 34612358 -216075496 - L2 LINE L2 -47 3225 3103 330 165 13 63 chr2 34615437 34615516 -216072338 + MLT1H LTR MaLR 55 129 -420 1922 164 9 21 chr2 34616203 34616538 -216071316 + MER2 DNA MER2_type 1 331 -14 413 292 139 5 chr2 34617248 34617457 -216070397 - L1ME4a LINE L1 -223 5898 5662 1857 206 28 47 chr2 34618636 34619106 -216068748 - MER65C LTR ERV1 0 461 1 490 348 44 45 chr2 34619106 34619864 -216067990 - MER65C-int LTR ERV1 0 6685 4209 10556 52 13 56 chr2 34619869 34621290 -216066564 + SVA Other Other 27 1386 0 234 0 0 0 chr2 34621596 34621622 -216066232 + (A)n Simple_repeat Simple_repeat 1 26 0 279 382 40 23 chr2 34622877 34623181 -216064673 - MER110-int LTR ERV1 -2094 2553 2245 1652 116 0 40 chr2 34623384 34623634 -216064220 + AluSp SINE Alu 1 240 -73 2107 113 34 0 chr2 34623634 34623926 -216063928 + AluSq SINE Alu 7 309 -4 691 138 121 0 chr2 34624605 34624721 -216063133 - AluJo SINE Alu -178 134 5 5862 38 6 0 chr2 34625297 34626009 -216061845 + L1PA4 LINE L1 5440 6155 0 1971 219 46 67 chr2 34627358 34627702 -216060152 - MLT2B3 LTR ERVL 0 554 225 2245 105 36 33 chr2 34627702 34628065 -216059789 + THE1B LTR MaLR 1 364 0 1971 219 46 67 chr2 34628065 34628286 -216059568 - MLT2B3 LTR ERVL -329 225 1 193 321 117 36 chr2 34629740 34629877 -216057977 - MER5B DNA MER1_type 0 178 31 320 264 55 0 chr2 34629991 34630082 -216057772 - MER5A DNA MER1_type -77 112 17 273 277 181 58 chr2 34630185 34630340 -216057514 + MER5A DNA MER1_type 15 188 -1 1337 265 71 6 chr2 34630590 34630941 -216056913 + MLT1A2 LTR MaLR 1 374 0 37 23 0 0 chr2 34631454 34631498 -216056356 + AT_rich Low_complexity Low_complexity 1 44 0 1888 179 48 68 chr2 34631765 34632280 -216055574 - MLT1D LTR MaLR 0 505 1 1233 122 89 24 chr2 34633390 34633637 -216054217 + L1MA8 LINE L1 6025 6287 -4 432 0 0 0 chr2 34634127 34634175 -216053679 + (TG)n Simple_repeat Simple_repeat 2 49 0 446 240 41 36 chr2 34634175 34634338 -216053516 + LTR40c LTR ERVL 164 310 -155 420 359 62 48 chr2 34634339 34634899 -216052955 + L1MEc LINE L1 1622 2189 -4207 2049 143 3 0 chr2 34634927 34635227 -216052627 + AluSx SINE Alu 1 301 -11 384 261 197 14 chr2 34636172 34636314 -216051540 + MER5A DNA MER1_type 19 186 -3 768 256 122 89 chr2 34636536 34636958 -216050896 - MLT1J LTR MaLR -9 502 60 2349 85 0 16 chr2 34636958 34637274 -216050580 + AluY SINE Alu 1 311 0 768 256 122 89 chr2 34637274 34637336 -216050518 - MLT1J LTR MaLR -451 60 2 186 103 0 0 chr2 34638402 34638431 -216049423 + (TTG)n Simple_repeat Simple_repeat 1 29 0 280 250 56 83 chr2 34638782 34638926 -216048928 - MIR SINE MIR -46 216 77 203 279 33 16 chr2 34638949 34639010 -216048844 - MER5B DNA MER1_type -6 172 111 5014 39 0 15 chr2 34639324 34639937 -216047917 + L1PA5 LINE L1 5532 6135 -19 27 0 0 0 chr2 34639937 34639964 -216047890 + AT_rich Low_complexity Low_complexity 1 27 0 408 335 78 52 chr2 34640682 34641103 -216046751 + HAL1b LINE L1 39 470 -878 14024 127 46 14 chr2 34641501 34643844 -216044010 - Tigger1 DNA MER2_type 0 2418 1 201 138 0 0 chr2 34643936 34643965 -216043889 + (GA)n Simple_repeat Simple_repeat 2 30 0 2448 212 34 77 chr2 34644257 34644532 -216043322 + L1ME1 LINE L1 5244 5529 -805 2316 57 54 3 chr2 34644532 34644828 -216043026 - AluY SINE Alu 0 311 1 2448 212 34 77 chr2 34644828 34645526 -216042328 + L1ME1 LINE L1 5529 6334 0 783 321 144 24 chr2 34645556 34646055 -216041799 - MLT1G1 LTR MaLR -36 559 1 6385 148 27 4 chr2 34646199 34647460 -216040394 + L1MC1 LINE L1 5023 6314 -19 2532 240 71 62 chr2 34647458 34648694 -216039160 + L1MC5 LINE L1 6658 7904 -57 * 232 349 28 0 chr2 34648738 34648844 -216039010 - MER5B DNA MER1_type -51 127 19 2296 144 59 12 chr2 34650706 34651115 -216036739 + MSTA LTR MaLR 1 428 0 1732 207 39 0 chr2 34652131 34652488 -216035366 + MLT1E1 LTR MaLR 3 373 -281 1191 252 96 26 chr2 34652561 34653233 -216034621 - LTR50 LTR ERVL 0 795 1 758 270 66 37 chr2 34653884 34653963 -216033891 + MIR SINE MIR 15 90 -172 1773 200 5 19 chr2 34653963 34654333 -216033521 - MLT1A1 LTR MaLR 0 365 1 758 270 66 37 chr2 34654333 34654494 -216033360 + MIR SINE MIR 90 262 0 1214 336 97 28 chr2 34654579 34655703 -216032151 + L2 LINE L2 2097 3312 -1 2107 156 52 31 chr2 34655785 34656327 -216031527 + MLT2A2 LTR ERVL 1 554 0 187 285 77 54 chr2 34656967 34657097 -216030757 + L2 LINE L2 1667 1799 -1515 1060 274 28 3 chr2 34657129 34657414 -216030440 + LTR16A LTR ERVL 158 449 -1 389 291 25 49 chr2 34657439 34657642 -216030212 + L2 LINE L2 3112 3309 -4 206 351 91 0 chr2 34657884 34657961 -216029893 + MIR SINE MIR 16 99 -163 3612 45 7 0 chr2 34658423 34658869 -216028985 + L1PA5 LINE L1 5701 6149 -5 189 0 0 0 chr2 34658869 34658890 -216028964 + (TA)n Simple_repeat Simple_repeat 1 21 0 1321 98 0 0 chr2 34660119 34660292 -216027562 + AluSp SINE Alu 132 304 -9 216 0 0 0 chr2 34660639 34660663 -216027191 + (CA)n Simple_repeat Simple_repeat 1 24 0 834 299 70 80 chr2 34660813 34661471 -216026383 - L2 LINE L2 -165 3148 2437 778 291 47 0 chr2 34661490 34661703 -216026151 - MER58A DNA MER1_type 0 224 2 360 0 0 0 chr2 34661868 34661908 -216025946 + (TG)n Simple_repeat Simple_repeat 2 41 0 921 287 115 13 chr2 34661995 34662195 -216025659 - L1MDa LINE L1 -2299 4241 4063 3462 170 74 12 chr2 34662195 34662859 -216024995 + MER44D DNA MER2_type 1 705 0 921 287 115 13 chr2 34662859 34663108 -216024746 - L1MDa LINE L1 -2477 4063 3841 2231 118 0 3 chr2 34663108 34663421 -216024433 - AluSx SINE Alu 0 312 1 921 287 115 13 chr2 34663421 34663579 -216024275 - L1MDa LINE L1 -2699 3841 3571 1310 237 191 49 chr2 34663603 34664371 -216023483 - L1MDa LINE L1 -3011 3529 2620 1822 144 31 10 chr2 34664371 34664663 -216023191 + AluSx SINE Alu 3 300 -12 1310 237 191 49 chr2 34664663 34664770 -216023084 - L1MDa LINE L1 -3920 2620 2530 2329 83 10 3 chr2 34665123 34665424 -216022430 + AluY SINE Alu 3 305 -6 1105 230 113 2 chr2 34665424 34665850 -216022004 - Charlie2 DNA MER1_type -73 2789 2317 548 264 69 44 chr2 34665903 34666221 -216021633 + Charlie2 DNA MER1_type 1978 2303 -559 652 98 0 10 chr2 34666253 34666355 -216021499 + L1MA8 LINE L1 4239 4339 -1807 4619 130 9 16 chr2 34666355 34667098 -216020756 + L1PA13 LINE L1 5419 6161 -2 2434 72 0 3 chr2 34667277 34667582 -216020272 - AluY SINE Alu -7 304 1 4615 162 69 15 chr2 34667771 34668071 -216019783 + L1MA8 LINE L1 4316 4598 -1693 2292 48 10 7 chr2 34668071 34668362 -216019492 - L1PA5 LINE L1 -6 6148 5857 4615 162 69 15 chr2 34668362 34669909 -216017945 + L1MA8 LINE L1 4598 6266 -25 22 56 0 0 chr2 34669912 34669948 -216017906 + AT_rich Low_complexity Low_complexity 1 36 0 1212 235 32 50 chr2 34670342 34670586 -216017268 + MLT1A1 LTR MaLR 30 268 -97 4452 48 67 0 chr2 34670586 34671153 -216016701 + L1PA5 LINE L1 5545 6149 -5 1212 235 32 50 chr2 34671153 34671248 -216016606 + MLT1A1 LTR MaLR 268 363 -2 4455 189 31 17 chr2 34671518 34672028 -216015826 + L1MB8 LINE L1 4909 5410 -768 438 20 0 0 chr2 34672028 34672079 -216015775 + (CA)n Simple_repeat Simple_repeat 2 52 0 4455 189 31 17 chr2 34672079 34672819 -216015035 + L1MB8 LINE L1 5410 6173 -5 290 250 125 21 chr2 34674282 34674378 -216013476 + L2 LINE L2 3158 3263 -9 500 293 63 29 chr2 34674873 34675079 -216012775 + MIR SINE MIR 42 252 -10 704 206 38 16 chr2 34675674 34675858 -216011996 - MER53 DNA DNA -1 188 1 183 80 0 0 chr2 34677613 34677638 -216010216 + (TG)n Simple_repeat Simple_repeat 2 26 0 450 331 22 0 chr2 34677808 34677944 -216009910 + MIR3 SINE MIR 20 158 -50 386 275 11 0 chr2 34678482 34678573 -216009281 - Zaphod DNA AcHobo -1 4030 3939 1961 131 7 10 chr2 34678912 34679217 -216008637 + AluSx SINE Alu 1 304 -8 621 309 87 23 chr2 34679803 34680277 -216007577 + ERVL-E LTR ERVL 2300 2821 -2753 837 263 57 32 chr2 34680278 34680431 -216007423 + MER5C DNA MER1_type 1 149 -175 252 0 0 0 chr2 34680431 34680459 -216007395 + (TA)n Simple_repeat Simple_repeat 1 28 0 2319 76 7 0 chr2 34680460 34680749 -216007105 - AluY SINE Alu -16 295 5 837 263 57 32 chr2 34680749 34680909 -216006945 + MER5C DNA MER1_type 148 324 0 381 207 37 0 chr2 34680935 34681017 -216006837 + MER58C DNA MER1_type 46 130 -85 429 247 0 0 chr2 34681045 34681138 -216006716 + MER58C DNA MER1_type 122 214 -1 2026 299 62 22 chr2 34681140 34682476 -216005378 + ERVL-E LTR ERVL 2817 4302 -1462 1924 177 3 23 chr2 34682507 34682851 -216005003 + MER1B DNA MER1_type 1 337 0 423 75 0 0 chr2 34682919 34682972 -216004882 - Charlie3 DNA MER1_type 0 2712 2660 308 281 87 56 chr2 34683130 34683361 -216004493 + ERVL-E LTR ERVL 5524 5761 -3 280 244 59 52 chr2 34683247 34683382 -216004472 + Ricksha DNA DNA 237 372 -1674 * 350 348 7 14 chr2 34683419 34683557 -216004297 + MLT2E LTR ERVL 33 169 -459 373 247 67 40 chr2 34683723 34683873 -216003981 + MLT2E LTR ERVL 475 628 0 1615 232 12 72 chr2 34683873 34684166 -216003688 - Zaphod DNA AcHobo -3647 384 120 4220 161 52 2 chr2 34684166 34684959 -216002895 - L1MA8 LINE L1 -18 6273 5442 1615 232 12 72 chr2 34684959 34685066 -216002788 - Zaphod DNA AcHobo -3911 120 8 679 205 16 0 chr2 34685864 34685991 -216001863 + MER2 DNA MER2_type 1 129 -216 1258 106 11 6 chr2 34685992 34686171 -216001683 - AluSg/x SINE Alu -8 304 125 463 151 0 0 chr2 34686171 34686257 -216001597 + MER2 DNA MER2_type 124 209 -136 181 327 0 18 chr2 34687529 34687584 -216000270 + L2 LINE L2 3025 3078 -194 424 293 47 54 chr2 34688371 34688624 -215999230 - MIR SINE MIR -12 250 4 1898 154 20 3 chr2 34688752 34689057 -215998797 - AluSx SINE Alu -2 310 1 815 187 21 16 chr2 34689105 34689292 -215998562 + MER53 DNA DNA 1 188 -1 3857 158 19 25 chr2 34689309 34690003 -215997851 + Tigger1 DNA MER2_type 1 690 -1728 4214 116 44 54 chr2 34690003 34690020 -215997834 + MER4E LTR ERV1 1 17 -762 2210 125 0 0 chr2 34690020 34690317 -215997537 - AluSg SINE Alu -13 297 1 4214 116 44 54 chr2 34690317 34691024 -215996830 + MER4E LTR ERV1 17 718 -61 2664 123 21 9 chr2 34691032 34691464 -215996390 + Tigger1 DNA MER2_type 691 1127 -1291 * 2802 137 38 13 chr2 34691461 34691936 -215995918 + Tigger1 DNA MER2_type 1930 2416 -2 573 208 0 0 chr2 34692883 34692979 -215994875 + MER58A DNA MER1_type 2 97 -10 456 274 188 0 chr2 34693035 34693221 -215994633 - MER58A DNA MER1_type -3 221 1 347 219 49 0 chr2 34693722 34693804 -215994050 - LTR50 LTR ERVL 0 795 710 977 47 78 0 chr2 34694545 34694674 -215993180 + MER85 DNA T2_type 1 139 0 563 188 30 10 chr2 34695349 34695450 -215992404 - FRAM SINE Alu -27 149 47 435 297 47 0 chr2 34696198 34696326 -215991528 - MIR3 SINE MIR -7 201 68 22371 153 41 8 chr2 34696816 34701313 -215986541 + L1M1 LINE L1 16 4673 -2892 977 175 105 15 chr2 34701784 34701984 -215985870 + MER20 DNA MER1_type 1 218 -1 393 282 141 37 chr2 34701988 34702181 -215985673 - MIR SINE MIR -38 224 16 2503 144 18 38 chr2 34702231 34702613 -215985241 - Tigger2a DNA MER2_type -2274 434 61 2307 70 0 55 chr2 34702613 34702940 -215984914 + AluY SINE Alu 1 309 -2 2503 144 18 38 chr2 34702940 34703000 -215984854 - Tigger2a DNA MER2_type -2647 61 1 23 0 0 0 chr2 34703452 34703475 -215984379 + AT_rich Low_complexity Low_complexity 1 23 0 1971 110 92 7 chr2 34703928 34704209 -215983645 + AluSg SINE Alu 1 305 -5 1884 186 52 31 chr2 34704298 34704745 -215983109 + L1MB7 LINE L1 5375 5830 -354 532 176 9 76 chr2 34704747 34704770 -215983084 + L1MB7 LINE L1 6003 6026 -154 2355 86 3 3 chr2 34704770 34705072 -215982782 - AluY SINE Alu -9 302 1 532 176 9 76 chr2 34705072 34705207 -215982647 + L1MB7 LINE L1 6026 6151 -29 328 317 75 60 chr2 34705795 34705994 -215981860 - HAL1 LINE L1 -2260 247 46 267 245 75 31 chr2 34706114 34706212 -215981642 + MIR SINE MIR 39 151 -65 502 211 116 60 chr2 34706348 34706523 -215981331 + MER5A DNA MER1_type 4 189 0 2098 112 3 10 chr2 34706887 34707182 -215980672 - AluSx SINE Alu -19 293 1 2504 67 0 0 chr2 34707423 34707723 -215980131 + AluSg1 SINE Alu 1 300 -9 21 0 0 0 chr2 34708644 34708665 -215979189 + AT_rich Low_complexity Low_complexity 1 21 0 258 276 26 78 chr2 34709224 34709253 -215978601 + MIR SINE MIR 68 97 -165 2422 71 0 10 chr2 34709253 34709561 -215978293 - AluY SINE Alu -6 305 1 258 276 26 78 chr2 34709561 34709647 -215978207 + MIR SINE MIR 97 177 -85 181 356 41 0 chr2 34710001 34710074 -215977780 + MIR SINE MIR 55 130 -78 180 0 0 0 chr2 34710235 34710255 -215977599 + (A)n Simple_repeat Simple_repeat 1 20 0 2530 80 0 0 chr2 34710422 34710733 -215977121 + AluY SINE Alu 1 311 0 2191 82 4 0 chr2 34710733 34711042 -215976812 + AluY SINE Alu 1 310 0 1184 120 89 13 chr2 34711889 34711961 -215975893 - L1MA9 LINE L1 -2 6310 6245 207 0 0 0 chr2 34711961 34711984 -215975870 + (TA)n Simple_repeat Simple_repeat 2 24 0 1184 120 89 13 chr2 34711984 34712136 -215975718 - L1MA9 LINE L1 -67 6245 6069 338 305 26 63 chr2 34712391 34712581 -215975273 + MIR3 SINE MIR 23 205 -3 339 285 152 7 chr2 34712900 34713051 -215974803 + MIR3 SINE MIR 30 202 -6 276 220 0 0 chr2 34713217 34713276 -215974578 + L2 LINE L2 3255 3313 0 221 0 35 0 chr2 34713979 34714008 -215973846 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1975 121 0 0 chr2 34714008 34714272 -215973582 - AluSg SINE Alu -46 264 1 21 0 0 0 chr2 34714698 34714719 -215973135 + AT_rich Low_complexity Low_complexity 1 21 0 2406 95 0 0 chr2 34715187 34715492 -215972362 + AluSc SINE Alu 1 305 -4 207 0 0 0 chr2 34715976 34715999 -215971855 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 34717101 34717123 -215970731 + AT_rich Low_complexity Low_complexity 1 22 0 538 225 11 120 chr2 34718352 34718543 -215969311 + MER5B DNA MER1_type 1 170 -8 522 256 28 17 chr2 34718779 34718955 -215968899 - MER5B DNA MER1_type 0 178 1 2451 212 29 27 chr2 34719210 34719763 -215968091 - MLT2B3 LTR ERVL 0 554 1 321 286 53 8 chr2 34720799 34720932 -215966922 + L1ME4a LINE L1 5982 6120 -1 197 404 43 11 chr2 34721418 34721512 -215966342 + L2 LINE L2 3147 3243 -29 2535 51 19 0 chr2 34721656 34721969 -215965885 - L1PA5 LINE L1 -8 6146 5828 310 329 19 19 chr2 34722067 34722228 -215965626 + MLT1J2 LTR MaLR 268 428 -22 217 247 103 62 chr2 34724480 34724577 -215963277 - MIR SINE MIR -65 143 43 2408 96 3 0 chr2 34724644 34724945 -215962909 - AluSp SINE Alu -11 302 1 494 285 90 38 chr2 34725352 34725619 -215962235 - MER45C DNA AcHobo -353 600 320 * 602 212 144 28 chr2 34725614 34725971 -215961883 - MLT1E2 LTR MaLR -76 550 59 251 287 82 8 chr2 34725867 34725989 -215961865 - MLT2C1 LTR ERVL -198 199 69 * 214 323 20 10 chr2 34726032 34726131 -215961723 - L2 LINE L2 -1004 2310 2211 249 33 0 0 chr2 34726459 34726489 -215961365 + (TG)n Simple_repeat Simple_repeat 2 31 0 772 159 16 8 chr2 34726995 34727121 -215960733 + FLAM_C SINE Alu 1 127 -16 260 167 0 42 chr2 34729386 34729434 -215958420 + MIR SINE MIR 101 146 -62 783 218 16 71 chr2 34729496 34729748 -215958106 - MLT2B1 LTR ERVL 0 520 283 607 274 59 59 chr2 34729887 34730175 -215957679 - MLT1I LTR MaLR -82 327 40 555 304 254 25 chr2 34730309 34731251 -215956603 + L2 LINE L2 1730 2886 -428 341 306 0 0 chr2 34731547 34731632 -215956222 + L2 LINE L2 3229 3313 0 2349 77 3 3 chr2 34732092 34732392 -215955462 - AluY SINE Alu -11 300 1 207 227 0 0 chr2 34732428 34732472 -215955382 + MIR SINE MIR 109 152 -110 677 280 91 12 chr2 34732545 34732788 -215955066 - MIR SINE MIR 0 262 1 196 278 43 11 chr2 34732901 34733014 -215954840 + MIR3 SINE MIR 122 262 0 263 286 29 0 chr2 34733778 34733848 -215954006 - MIR SINE MIR -117 145 74 2261 217 82 4 chr2 34733968 34734194 -215953660 - MLT1E LTR MaLR -2 591 384 390 42 0 0 chr2 34734194 34734242 -215953612 + (TATG)n Simple_repeat Simple_repeat 2 49 0 2261 217 82 4 chr2 34734242 34734555 -215953299 - MLT1E LTR MaLR -209 384 10 284 291 91 15 chr2 34734568 34734767 -215953087 - L2 LINE L2 -218 3054 2841 245 234 16 16 chr2 34734880 34734944 -215952910 - L2 LINE L2 0 3272 3209 299 23 47 0 chr2 34735469 34735512 -215952342 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 2143 98 4 0 chr2 34735514 34735791 -215952063 - AluY SINE Alu -33 278 1 1623 157 12 0 chr2 34736091 34736346 -215951508 + MER1A DNA MER1_type 1 258 -269 5861 171 25 16 chr2 34736353 34737144 -215950710 - L1PB1 LINE L1 -8 6143 5361 2211 116 0 13 chr2 34737144 34737446 -215950408 + AluSq SINE Alu 1 298 -15 5861 171 25 16 chr2 34737446 34738790 -215949064 - L1PB1 LINE L1 -790 5361 3977 1677 118 19 11 chr2 34738791 34739061 -215948793 + MER1A DNA MER1_type 258 529 0 208 370 108 0 chr2 34739066 34739201 -215948653 - MIR SINE MIR -86 176 23 206 233 117 0 chr2 34740403 34740463 -215947391 + MIR SINE MIR 119 185 -77 471 263 165 10 chr2 34741318 34741512 -215946342 + MIR SINE MIR 12 235 -27 22 35 0 0 chr2 34741578 34741607 -215946247 + AT_rich Low_complexity Low_complexity 1 29 0 1812 98 55 4 chr2 34742090 34742346 -215945508 - AluSg SINE Alu -16 294 26 4570 257 64 37 chr2 34742917 34744397 -215943457 + L1MEc LINE L1 69 1508 -4707 587 215 15 8 chr2 34744397 34744527 -215943327 + FLAM_A SINE Alu 1 131 -2 4570 257 64 37 chr2 34744527 34744735 -215943119 + L1MEc LINE L1 1508 1709 -4506 2486 70 0 6 chr2 34744735 34745048 -215942806 - AluY SINE Alu 0 311 1 4570 257 64 37 chr2 34745048 34745485 -215942369 + L1MEc LINE L1 1709 2133 -4082 1369 220 24 30 chr2 34745485 34745781 -215942073 - AluJb SINE Alu -18 294 1 4570 257 64 37 chr2 34745781 34746481 -215941373 + L1MEc LINE L1 2133 2952 -3263 2450 176 18 29 chr2 34746507 34747059 -215940795 + L1MA10 LINE L1 5789 6334 0 432 299 51 10 chr2 34747197 34747382 -215940472 + MIR3 SINE MIR 14 205 -3 267 31 0 0 chr2 34747422 34747454 -215940400 + (CA)n Simple_repeat Simple_repeat 2 33 0 191 125 25 0 chr2 34750470 34750510 -215937344 + CT-rich Low_complexity Low_complexity 2 42 0 261 210 16 16 chr2 34750545 34750607 -215937247 - MLT1K LTR MaLR -339 249 188 231 217 0 0 chr2 34750903 34750963 -215936891 + HAL1b LINE L1 696 755 -593 727 189 13 20 chr2 34751161 34751314 -215936540 + MER6B DNA MER2_type 1 152 -58 3196 151 2 3 chr2 34751314 34751975 -215935879 + L1P4 LINE L1 4772 5432 -736 3191 173 73 10 chr2 34751975 34752692 -215935162 - LTR1B LTR ERV1 0 785 8 4617 94 50 20 chr2 34752692 34753408 -215934446 + L1PA13 LINE L1 5422 6159 -4 23 33 0 0 chr2 34753412 34753442 -215934412 + AT_rich Low_complexity Low_complexity 1 30 0 298 250 56 0 chr2 34753443 34753515 -215934339 + MER6B DNA MER2_type 130 205 -5 205 194 0 0 chr2 34753553 34753589 -215934265 + A-rich Low_complexity Low_complexity 4 39 0 1122 221 13 77 chr2 34754084 34754383 -215933471 + AluJo SINE Alu 3 282 -30 2283 115 3 0 chr2 34754410 34754715 -215933139 + AluSg SINE Alu 1 306 -4 271 290 71 4 chr2 34754947 34755216 -215932638 + L1M4 LINE L1 2732 3018 -3128 230 194 42 14 chr2 34755230 34755302 -215932552 + (TA)n Simple_repeat Simple_repeat 1 74 0 22 0 0 0 chr2 34755563 34755585 -215932269 + AT_rich Low_complexity Low_complexity 1 22 0 1937 251 47 41 chr2 34755728 34756409 -215931445 + L1 LINE L1 65 749 -6281 1524 250 34 17 chr2 34756412 34757128 -215930726 + L1 LINE L1 1780 2517 -4520 7144 172 78 17 chr2 34757181 34757486 -215930368 + L1 LINE L1 3996 4281 -2825 1818 122 15 92 chr2 34757486 34757823 -215930031 - AluSq SINE Alu 0 313 3 7144 172 78 17 chr2 34757823 34759295 -215928559 + L1 LINE L1 4281 5880 -1226 2088 132 72 1 chr2 34759287 34759309 -215928545 - L1M2 LINE L1 -661 5630 5611 * 5594 112 39 6 chr2 34759309 34761027 -215926827 - L1PA12 LINE L1 0 6168 4394 2088 132 72 1 chr2 34761027 34761615 -215926239 - L1M2 LINE L1 -680 5611 4978 323 305 75 21 chr2 34761670 34761857 -215925997 + L1MC4a LINE L1 5149 5345 -801 1934 168 14 0 chr2 34761857 34762148 -215925706 + AluSx SINE Alu 1 295 -17 518 295 132 28 chr2 34762201 34762564 -215925290 + L1MC4a LINE L1 5421 5821 -1987 2097 119 0 0 chr2 34762570 34762848 -215925006 + AluSg SINE Alu 1 278 -32 1625 185 0 30 chr2 34762896 34763194 -215924660 + AluJo SINE Alu 1 289 -23 227 217 47 75 chr2 34763213 34763319 -215924535 + L1MC4a LINE L1 5839 5941 -1867 1889 164 71 22 chr2 34763799 34764135 -215923719 + MSTA LTR MaLR 1 362 -66 6477 65 54 6 chr2 34764135 34765183 -215922671 - L1PA6 LINE L1 -4 6150 5074 1889 164 71 22 chr2 34765183 34765254 -215922600 + MSTA LTR MaLR 362 428 0 8529 172 48 5 chr2 34765254 34766835 -215921019 + MSTB-int LTR MaLR 1 1649 -2 2025 190 81 0 chr2 34766837 34767231 -215920623 + MSTB LTR MaLR 1 426 0 238 175 70 0 chr2 34770084 34770141 -215917713 - MIR SINE MIR -65 197 137 1457 325 82 46 chr2 34770815 34771213 -215916641 + L2 LINE L2 1739 2122 -1150 2330 83 0 7 chr2 34771213 34771513 -215916341 - AluY SINE Alu -13 298 1 1457 325 82 46 chr2 34771513 34772389 -215915465 + L2 LINE L2 2122 3059 -213 180 111 0 0 chr2 34772619 34772646 -215915208 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2297 104 0 3 chr2 34772829 34773127 -215914727 + AluSc SINE Alu 1 297 -12 180 0 0 0 chr2 34773127 34773147 -215914707 + (TA)n Simple_repeat Simple_repeat 2 21 0 394 256 44 7 chr2 34773841 34773978 -215913876 - MER69 DNA AcHobo -1084 142 1 336 380 68 22 chr2 34775046 34775546 -215912308 + L2 LINE L2 1774 2296 -1018 766 279 82 55 chr2 34775651 34776067 -215911787 - MLT1J1 LTR MaLR -3 443 17 213 214 146 79 chr2 34776350 34776439 -215911415 + MER5B DNA MER1_type 84 178 0 6711 115 25 17 chr2 34776508 34777571 -215910283 - MER11C LTR ERVK 0 1071 1 2095 138 0 0 chr2 34777599 34777897 -215909957 + AluSc SINE Alu 1 298 -11 422 230 11 48 chr2 34778245 34778432 -215909422 + (TA)n Simple_repeat Simple_repeat 1 180 0 195 218 0 0 chr2 34778445 34778546 -215909308 + (TA)n Simple_repeat Simple_repeat 1 101 0 892 252 107 49 chr2 34778547 34778619 -215909235 - MLT2D LTR ERVL -41 423 357 2246 113 6 0 chr2 34778619 34778930 -215908924 + AluSp SINE Alu 1 313 0 892 252 107 49 chr2 34778930 34779213 -215908641 - MLT2D LTR ERVL -107 357 53 29 47 0 0 chr2 34779436 34779479 -215908375 + AT_rich Low_complexity Low_complexity 1 43 0 664 338 85 25 chr2 34779594 34780067 -215907787 + L2 LINE L2 2812 3312 -1 509 294 60 10 chr2 34780834 34781218 -215906636 + L1M4 LINE L1 2652 3054 -3092 858 277 111 21 chr2 34781833 34782212 -215905642 + MER77 LTR ERV1 185 597 -8 1582 168 82 48 chr2 34782553 34782905 -215904949 - MLT1A1 LTR MaLR 0 365 2 518 309 61 77 chr2 34783305 34783762 -215904092 + L1M4 LINE L1 2689 3138 -3008 346 292 58 25 chr2 34783819 34784096 -215903758 + L1M4 LINE L1 3687 3972 -2174 734 196 0 0 chr2 34784192 34784325 -215903529 + MER47A DNA MER2_type 1 133 -233 655 197 21 7 chr2 34784335 34784477 -215903377 + Tigger1 DNA MER2_type 2 145 -2273 975 167 33 0 chr2 34784482 34784662 -215903192 + Tigger1 DNA MER2_type 2233 2418 0 * 1315 137 73 0 chr2 34784662 34784880 -215902974 + MER47A DNA MER2_type 129 362 -4 239 290 104 18 chr2 34784889 34785110 -215902744 + L1M4 LINE L1 4102 4341 -1805 501 198 15 86 chr2 34785196 34785393 -215902461 + L1MC5 LINE L1 6928 7110 -851 820 238 48 113 chr2 34785504 34785904 -215901950 + MLT1A2 LTR MaLR 1 374 0 558 201 36 0 chr2 34785904 34786043 -215901811 + L1MC5 LINE L1 7274 7417 -544 2279 110 3 0 chr2 34786100 34786409 -215901445 + AluY SINE Alu 1 310 -1 267 178 0 68 chr2 34786464 34786537 -215901317 + L1MA8 LINE L1 6182 6249 -42 258 130 167 0 chr2 34786539 34786593 -215901261 + L1MA8 LINE L1 6208 6270 -21 1897 111 75 0 chr2 34786599 34786879 -215900975 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 34786882 34786903 -215900951 + AT_rich Low_complexity Low_complexity 1 21 0 373 206 147 80 chr2 34786956 34787344 -215900510 + L1MC5 LINE L1 7510 7923 -38 477 129 11 21 chr2 34788538 34788631 -215899223 - THE1C-int LTR MaLR -1488 92 1 1719 126 21 149 chr2 34788631 34789061 -215898793 - THE1C LTR MaLR 0 375 1 1060 109 32 4 chr2 34789132 34789330 -215898524 + L1MA1 LINE L1 5925 6132 -170 2183 115 0 16 chr2 34789460 34789774 -215898080 + AluSc SINE Alu 1 309 0 288 0 0 0 chr2 34789784 34789816 -215898038 + (TA)n Simple_repeat Simple_repeat 2 33 0 2201 105 0 41 chr2 34791170 34791484 -215896370 + AluSq SINE Alu 1 301 -12 2287 77 10 0 chr2 34792401 34792701 -215895153 - AluY SINE Alu -8 303 1 284 194 97 0 chr2 34793223 34793285 -215894569 + MLT2D LTR ERVL 216 283 -131 211 132 0 26 chr2 34794309 34794347 -215893507 + (TTC)n Simple_repeat Simple_repeat 1 37 0 327 109 4 0 chr2 34794400 34794460 -215893394 + Alu SINE Alu 1 46 -256 756 280 94 5 chr2 34794886 34795215 -215892639 + LTR16A1 LTR ERVL 114 455 -2 246 100 0 0 chr2 34795238 34795261 -215892593 + (TC)n Simple_repeat Simple_repeat 1 26 -14 243 0 0 0 chr2 34795261 34795288 -215892566 + (CA)n Simple_repeat Simple_repeat 1 27 0 246 100 0 0 chr2 34795288 34795304 -215892550 + (TC)n Simple_repeat Simple_repeat 25 40 0 435 19 0 0 chr2 34795592 34795644 -215892210 + (TG)n Simple_repeat Simple_repeat 2 53 0 1145 104 55 0 chr2 34795755 34795918 -215891936 + AluSg SINE Alu 1 172 -138 1011 262 23 52 chr2 34796023 34796366 -215891488 - MER77-int LTR ERV1 -3845 346 14 2626 197 58 39 chr2 34796384 34796972 -215890882 - MER77 LTR ERV1 -6 599 1 1436 148 186 5 chr2 34796976 34797380 -215890474 + Charlie5 DNA MER1_type 1669 2145 -467 204 290 0 16 chr2 34798885 34798947 -215888907 + CT-rich Low_complexity Low_complexity 2 62 0 343 268 94 0 chr2 34798986 34799124 -215888730 + MER103 DNA DNA 13 163 -3 2231 98 0 0 chr2 34799280 34799566 -215888288 + AluY SINE Alu 9 294 -17 300 53 0 0 chr2 34799652 34799690 -215888164 + (CA)n Simple_repeat Simple_repeat 1 38 0 1849 5 5 0 chr2 34800520 34800722 -215887132 + AluYa5 SINE Alu 106 308 -3 404 315 150 23 chr2 34800734 34801080 -215886774 - MLT1C LTR MaLR -68 399 10 2283 78 0 0 chr2 34801221 34801532 -215886322 + AluY SINE Alu 1 311 0 206 331 39 58 chr2 34802589 34802743 -215885111 - MIR SINE MIR -48 214 64 931 220 8 62 chr2 34804033 34804152 -215883702 + L1MB8 LINE L1 5017 5116 -1030 1851 122 20 54 chr2 34804152 34804280 -215883574 + AluSc SINE Alu 1 132 -177 2450 60 10 0 chr2 34804280 34804578 -215883276 + AluY SINE Alu 1 301 -10 1851 122 20 54 chr2 34804578 34804744 -215883110 + AluSc SINE Alu 132 285 -24 931 220 8 62 chr2 34804744 34804883 -215882971 + L1MB8 LINE L1 5116 5261 -885 2151 186 6 55 chr2 34804891 34805363 -215882491 + L1MB8 LINE L1 5718 6166 -12 22 0 0 0 chr2 34805596 34805618 -215882236 + AT_rich Low_complexity Low_complexity 1 22 0 252 86 0 0 chr2 34806243 34806278 -215881576 + (TG)n Simple_repeat Simple_repeat 1 35 0 24 53 0 0 chr2 34806596 34806634 -215881220 + AT_rich Low_complexity Low_complexity 1 38 0 23 54 0 0 chr2 34806890 34806927 -215880927 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 34807321 34807342 -215880512 + AT_rich Low_complexity Low_complexity 1 21 0 2315 89 0 3 chr2 34807417 34807721 -215880133 + AluY SINE Alu 1 303 -8 4011 104 0 4 chr2 34808310 34808821 -215879033 + MER9 LTR ERVK 3 511 0 22272 74 1 6 chr2 34808821 34811621 -215876233 + HERVK9 LTR ERVK 1 2786 -3130 1941 52 0 0 chr2 34811621 34811852 -215876002 + HERVK9 LTR ERVK 3711 3941 -1975 * 7750 102 3 4 chr2 34811851 34812906 -215874948 + HERVK9 LTR ERVK 4582 5635 -281 2208 148 4 2 chr2 34812927 34813283 -215874571 + HERVK9 LTR ERVK 5635 5916 0 3758 95 12 18 chr2 34813283 34813797 -215874057 + MER9 LTR ERVK 1 511 0 196 294 86 68 chr2 34814679 34814842 -215873012 - L3 LINE CR1 -1 1576 1411 1454 202 58 17 chr2 34815639 34816001 -215871853 + Charlie4a DNA MER1_type 8 384 -124 36 40 0 0 chr2 34816554 34816604 -215871250 + AT_rich Low_complexity Low_complexity 1 50 0 1548 103 0 5 chr2 34816902 34817125 -215870729 - AluSg/x SINE Alu 0 300 79 210 143 0 0 chr2 34817283 34817318 -215870536 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 550 334 127 14 chr2 34817607 34818178 -215869676 + L2 LINE L2 2682 3313 0 631 201 54 49 chr2 34818576 34818760 -215869094 + MLT1B LTR MaLR 3 187 -203 257 337 11 0 chr2 34819175 34819270 -215868584 + MIR3 SINE MIR 90 185 -23 1498 137 69 4 chr2 34820098 34820375 -215867479 - L1MA8 LINE L1 0 6291 5997 2178 100 0 4 chr2 34820802 34821106 -215866748 + AluY SINE Alu 1 303 0 2311 97 0 3 chr2 34821106 34821414 -215866440 + AluY SINE Alu 2 308 -3 206 135 11 56 chr2 34821437 34821526 -215866328 + A-rich Low_complexity Low_complexity 2 86 0 240 303 0 40 chr2 34821628 34821727 -215866127 + (TA)n Simple_repeat Simple_repeat 2 96 0 2017 120 7 10 chr2 34821857 34822149 -215865705 + AluSq SINE Alu 1 291 -22 231 36 0 0 chr2 34822151 34822179 -215865675 + (TG)n Simple_repeat Simple_repeat 2 29 0 240 65 43 94 chr2 34822225 34822363 -215865491 + (TTATA)n Simple_repeat Simple_repeat 5 135 0 375 305 37 53 chr2 34822426 34822616 -215865238 - MIR SINE MIR 0 262 76 706 123 15 51 chr2 34822851 34823046 -215864808 + HERV9 LTR ERV1 713 900 -7726 353 161 0 0 chr2 34823044 34823106 -215864748 + HERV9 LTR ERV1 7503 7564 -835 * 4735 102 4 8 chr2 34823102 34824044 -215863810 + HERV9 LTR ERV1 504 8399 0 528 134 18 18 chr2 34824044 34824146 -215863708 + pTR5 LTR ERV1 1118 1219 -1219 974 108 102 0 chr2 34824140 34824306 -215863548 + pTR5 LTR ERV1 210 392 -2046 2743 237 28 43 chr2 34824822 34825318 -215862536 + L1MCb LINE L1 570 1072 -5492 2040 122 0 43 chr2 34825318 34825622 -215862232 + AluSg SINE Alu 1 291 -19 2743 237 28 43 chr2 34825622 34826081 -215861773 + L1MCb LINE L1 1072 1516 -5048 2449 69 0 7 chr2 34826081 34826385 -215861469 + AluY SINE Alu 1 302 -9 2743 237 28 43 chr2 34826385 34826649 -215861205 + L1MCb LINE L1 1516 1783 -4781 1701 153 10 17 chr2 34826666 34826954 -215860900 - AluJb SINE Alu -26 286 1 1824 175 44 6 chr2 34827050 34827392 -215860462 - L1PB4 LINE L1 -4 6152 5798 922 197 10 10 chr2 34827395 34827603 -215860251 + L1P LINE L1 5078 5285 -861 712 225 234 11 chr2 34827606 34827961 -215859893 + L1MCb LINE L1 1950 2383 -4181 2315 77 0 27 chr2 34827965 34828263 -215859591 + AluY SINE Alu 1 290 -21 1372 146 82 167 chr2 34828406 34828872 -215858982 - MSTA LTR MaLR -2 426 1 1401 188 28 10 chr2 34828965 34829394 -215858460 - LTR32 LTR ERVL -1 470 8 180 314 220 25 chr2 34829581 34829699 -215858155 + L3 LINE CR1 1392 1532 -45 1792 158 123 22 chr2 34829790 34829932 -215857922 + MER57A LTR ERV1 1 127 -276 2115 178 66 82 chr2 34829932 34830494 -215857360 - MLT2B3 LTR ERVL 0 554 2 1792 158 123 22 chr2 34830494 34830717 -215857137 + MER57A LTR ERV1 127 403 0 3159 208 50 2 chr2 34831660 34832284 -215855570 + MLT1E1 LTR MaLR 1 654 0 2167 106 0 0 chr2 34832771 34833075 -215854779 - AluSq SINE Alu 0 305 2 2412 84 0 0 chr2 34833092 34833389 -215854465 - AluY SINE Alu -13 298 2 2047 160 33 3 chr2 34833840 34834172 -215853682 + MER2 DNA MER2_type 3 344 0 1093 175 85 88 chr2 34834226 34834580 -215853274 + MLT2B1 LTR ERVL 7 359 -55 810 92 0 21 chr2 34834588 34834730 -215853124 + (TC)n Simple_repeat Simple_repeat 2 140 0 2164 64 3 11 chr2 34836896 34837206 -215850648 - AluY SINE Alu 0 308 1 3033 185 42 10 chr2 34837377 34838110 -215849744 + L1MB8 LINE L1 4679 5435 -743 2132 252 62 41 chr2 34838294 34839196 -215848658 + L1MB8 LINE L1 3933 4853 -1293 625 127 75 202 chr2 34839191 34839458 -215848396 - L1MB8 LINE L1 -40 6138 5906 * 3767 142 75 41 chr2 34839445 34840176 -215847678 + L1MB8 LINE L1 5414 6169 -9 792 166 72 0 chr2 34840302 34840441 -215847413 + MLT1A1 LTR MaLR 170 318 -47 1723 158 8 0 chr2 34840572 34840838 -215847016 - AluJo SINE Alu -21 291 24 4233 141 112 35 chr2 34841241 34842008 -215845846 - LTR1B LTR ERV1 0 826 1 744 264 84 13 chr2 34842065 34842292 -215845562 - MIR SINE MIR -12 250 8 239 377 117 0 chr2 34842268 34842422 -215845432 + L2 LINE L2 3101 3272 0 * 455 242 19 31 chr2 34842516 34842677 -215845177 + L1M4 LINE L1 49 207 -6335 1975 154 10 0 chr2 34842782 34843088 -215844766 - AluSg SINE Alu -1 309 1 1070 189 18 53 chr2 34843130 34843357 -215844497 - MER20 DNA MER1_type 0 219 1 3276 209 55 17 chr2 34843368 34843812 -215844042 + L1MB8 LINE L1 4963 5389 -789 3285 140 29 4 chr2 34843812 34844297 -215843557 + LOR1a LTR ERV1 1 497 0 3276 209 55 17 chr2 34844297 34845018 -215842836 + L1MB8 LINE L1 5389 6170 -8 454 183 51 44 chr2 34845024 34845161 -215842693 + L1MC5 LINE L1 7772 7909 -52 2198 124 3 0 chr2 34845170 34845469 -215842385 + AluSx SINE Alu 1 300 -12 391 286 117 49 chr2 34845900 34846105 -215841749 + MIR SINE MIR 1 221 -41 2118 99 14 3 chr2 34846162 34846445 -215841409 + AluSg SINE Alu 1 286 -24 502 252 180 18 chr2 34846639 34846861 -215840993 + MIR SINE MIR 3 260 -2 431 178 76 34 chr2 34847160 34847278 -215840576 - MER69 DNA AcHobo -24 2502 2380 258 313 0 0 chr2 34847434 34847501 -215840353 - MER69 DNA AcHobo -110 67 1 424 207 49 177 chr2 34847509 34847635 -215840219 + L2 LINE L2 3048 3114 -199 2158 115 7 0 chr2 34847635 34847940 -215839914 - AluSx SINE Alu 0 312 6 424 207 49 177 chr2 34847940 34848118 -215839736 + L2 LINE L2 3114 3313 0 5251 109 46 64 chr2 34849495 34850336 -215837518 + LTR12 LTR ERV1 1 826 0 3607 118 10 0 chr2 34850712 34851204 -215836650 + LOR1a LTR ERV1 1 497 0 1146 227 81 25 chr2 34851268 34851345 -215836509 + MLT1C LTR MaLR 3 74 -393 2309 102 3 3 chr2 34851345 34851648 -215836206 + AluSc SINE Alu 1 303 -6 1146 227 81 25 chr2 34851648 34851891 -215835963 + MLT1C LTR MaLR 74 341 -126 1531 165 51 15 chr2 34851891 34852311 -215835543 - MER61D LTR ERV1 0 501 4 727 190 7 15 chr2 34852311 34852444 -215835410 + MLT1C LTR MaLR 336 467 0 207 0 0 0 chr2 34852518 34852541 -215835313 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 693 94 55 31 chr2 34853825 34853952 -215833902 + MSTA-int LTR MaLR 1421 1550 -30 1994 164 119 11 chr2 34853960 34854339 -215833515 + MSTA LTR MaLR 9 428 0 1329 213 7 31 chr2 34855215 34855506 -215832348 - MER61D-int LTR ERV1 -55 4136 3853 2373 100 3 0 chr2 34855514 34855815 -215832039 - AluY SINE Alu -9 302 1 1375 123 155 20 chr2 34855874 34856126 -215831728 + LTR26E LTR ERV1 1 286 -336 1745 117 82 82 chr2 34856557 34856613 -215831241 + LTR26B LTR ERV1 189 244 -287 2313 66 40 13 chr2 34856613 34856915 -215830939 + AluY SINE Alu 1 310 -1 1745 117 82 82 chr2 34856915 34856968 -215830886 + LTR26B LTR ERV1 244 296 -235 2171 99 23 78 chr2 34856968 34857353 -215830501 - THE1B LTR MaLR 0 364 1 1745 117 82 82 chr2 34857353 34857585 -215830269 + LTR26B LTR ERV1 295 531 0 1339 200 165 17 chr2 34857657 34858002 -215829852 - MSTD LTR MaLR 0 396 1 1685 219 70 111 chr2 34858005 34858691 -215829163 - MER61D-int LTR ERV1 -455 3736 3079 2278 152 86 10 chr2 34858734 34859129 -215828725 + MSTA LTR MaLR 4 428 0 9546 160 32 16 chr2 34859153 34860763 -215827091 + MSTA-int LTR MaLR 15 1650 -1 1654 164 183 16 chr2 34860764 34861131 -215826723 + MSTA LTR MaLR 1 428 0 3014 179 10 2 chr2 34861147 34861640 -215826214 + LOR1a LTR ERV1 1 497 0 3821 245 20 57 chr2 34861643 34862728 -215825126 - MER61D-int LTR ERV1 -1133 3058 2014 456 346 56 49 chr2 34862536 34863194 -215824660 - HERVL LTR ERVL -2172 3482 2820 * 22 0 0 0 chr2 34863265 34863287 -215824567 + AT_rich Low_complexity Low_complexity 1 22 0 275 277 12 12 chr2 34863354 34863437 -215824417 - HERVL LTR ERVL -3736 2311 2229 3324 248 70 89 chr2 34863744 34865178 -215822676 - MER4B-int LTR ERV1 -1986 4772 3367 2380 93 0 0 chr2 34865653 34865955 -215821899 - AluY SINE Alu -7 304 3 207 0 0 0 chr2 34865959 34865982 -215821872 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1951 133 15 0 chr2 34865992 34866263 -215821591 - AluSx SINE Alu -37 275 1 2225 100 0 3 chr2 34866607 34866897 -215820957 - AluSc SINE Alu -20 289 1 182 362 0 57 chr2 34867083 34867188 -215820666 + L3 LINE CR1 8 106 -1471 211 273 18 0 chr2 34868586 34868641 -215819213 + GA-rich Low_complexity Low_complexity 4 59 0 1616 286 79 57 chr2 34868720 34869381 -215818473 + ERVL LTR ERVL 3179 3824 -1940 1582 194 0 58 chr2 34869381 34869706 -215818148 + AluJo SINE Alu 3 308 -4 1616 286 79 57 chr2 34869706 34870264 -215817590 + ERVL LTR ERVL 3824 4490 -1274 2534 50 3 3 chr2 34870264 34870564 -215817290 + AluY SINE Alu 1 300 -11 1616 286 79 57 chr2 34870564 34870657 -215817197 + ERVL LTR ERVL 4490 4580 -1184 604 200 0 0 chr2 34870676 34870771 -215817083 - FRAM SINE Alu -28 148 54 863 260 145 32 chr2 34870772 34871207 -215816647 + ERVL LTR ERVL 4586 5069 -695 918 265 114 33 chr2 34871877 34872044 -215815810 + LTR67 LTR ERVL 169 321 -236 515 72 0 175 chr2 34872044 34872141 -215815713 + MADE1 DNA Mariner 1 80 0 918 265 114 33 chr2 34872141 34872332 -215815522 + LTR67 LTR ERVL 321 556 -1 218 215 0 31 chr2 34872415 34872480 -215815374 + (TTCA)n Simple_repeat Simple_repeat 2 64 0 621 335 133 27 chr2 34872480 34873239 -215814615 - L2 LINE L2 0 3313 2468 1594 219 71 40 chr2 34873510 34873963 -215813891 - MLT1C LTR MaLR 0 467 1 540 233 41 0 chr2 34874080 34874226 -215813628 - MER103 DNA DNA -4 162 11 1577 197 97 0 chr2 34875398 34875740 -215812114 + MSTB1 LTR MaLR 68 432 0 182 256 195 12 chr2 34876090 34876172 -215811682 - L3 LINE CR1 -6 1571 1475 24 32 0 0 chr2 34876271 34876302 -215811552 + AT_rich Low_complexity Low_complexity 1 31 0 432 0 0 0 chr2 34876563 34876611 -215811243 + (CA)n Simple_repeat Simple_repeat 2 49 0 1951 79 0 0 chr2 34876782 34877022 -215810832 + AluSc SINE Alu 56 295 -14 199 328 35 0 chr2 34877085 34877143 -215810711 - L2 LINE L2 0 3272 3213 2126 185 13 8 chr2 34877875 34878269 -215809585 - MER57A LTR ERV1 -1 402 7 209 254 30 90 chr2 34878320 34878387 -215809467 - L2 LINE L2 -54 3218 3156 206 216 0 0 chr2 34878466 34878503 -215809351 + polypurine Low_complexity Low_complexity 4 40 0 2225 110 0 3 chr2 34878764 34879065 -215808789 + AluSx SINE Alu 1 300 -12 3898 90 147 149 chr2 34881565 34882389 -215805465 - LTR12 LTR ERV1 0 826 5 2167 206 40 33 chr2 34882399 34883006 -215804848 - pTR5 LTR ERV1 -1087 1351 741 419 266 60 86 chr2 34883138 34883571 -215804283 + HAL1b LINE L1 69 490 -858 247 246 45 82 chr2 34883768 34883902 -215803952 + L1 LINE L1 2788 2916 -3230 712 251 14 106 chr2 34884106 34884147 -215803707 + L1ME3 LINE L1 5832 5875 -289 1993 143 3 3 chr2 34884147 34884448 -215803406 + AluSx SINE Alu 1 301 -11 712 251 14 106 chr2 34884448 34884773 -215803081 + L1ME3 LINE L1 5875 6164 0 314 153 0 14 chr2 34885662 34885762 -215802092 + MER53 DNA DNA 2 159 -30 214 159 0 72 chr2 34885991 34886060 -215801794 + A-rich Low_complexity Low_complexity 2 65 0 812 232 157 14 chr2 34886063 34886433 -215801421 + HAL1b LINE L1 400 822 -526 411 220 88 64 chr2 34886455 34886705 -215801149 + HAL1b LINE L1 888 1143 -205 238 186 0 51 chr2 34886767 34886826 -215801028 - L2 LINE L2 0 3313 3258 226 269 110 35 chr2 34886871 34886959 -215800895 + HAL1b LINE L1 1193 1298 -50 2409 94 0 0 chr2 34886959 34887266 -215800588 - AluY SINE Alu -4 307 1 226 269 110 35 chr2 34887266 34887322 -215800532 + HAL1b LINE L1 1298 1348 0 579 209 29 0 chr2 34887647 34887752 -215800102 - MLT1A1 LTR MaLR -255 110 3 979 254 142 43 chr2 34887804 34888322 -215799532 + L2 LINE L2 2751 3312 -1 304 238 52 12 chr2 34889006 34889133 -215798721 + L1ME LINE L1 5709 5842 -328 242 202 27 9 chr2 34889134 34889257 -215798597 + CT-rich Low_complexity Low_complexity 1 125 0 275 368 9 18 chr2 34889412 34889526 -215798328 + L2 LINE L2 2979 3091 -181 530 309 29 62 chr2 34893513 34893756 -215794098 + MIR SINE MIR 13 247 -15 1528 214 30 84 chr2 34894542 34895005 -215792849 + LTR16A LTR ERVL 6 443 -7 27 0 0 0 chr2 34895556 34895583 -215792271 + AT_rich Low_complexity Low_complexity 1 27 0 783 220 126 106 chr2 34895641 34895965 -215791889 - HAL1b LINE L1 0 1348 1007 10662 58 22 7 chr2 34895965 34897319 -215790535 + SVA Other Other 12 1386 0 783 220 126 106 chr2 34897319 34897549 -215790305 - HAL1b LINE L1 -341 1007 783 1445 288 60 12 chr2 34897549 34898032 -215789822 + MLT1J LTR MaLR 1 506 -5 418 201 30 79 chr2 34898069 34898233 -215789621 - HAL1b LINE L1 -569 779 624 2621 149 54 46 chr2 34898240 34898434 -215789420 - MLT1D LTR MaLR -2 503 312 2318 172 94 9 chr2 34898434 34898882 -215788972 + MER66B LTR ERV1 1 486 0 2621 149 54 46 chr2 34898882 34899184 -215788670 - MLT1D LTR MaLR -193 312 3 785 310 85 44 chr2 34899193 34899467 -215788387 - HAL1b LINE L1 -692 656 395 2507 55 3 10 chr2 34899467 34899779 -215788075 - AluY SINE Alu -1 310 1 785 310 85 44 chr2 34899779 34900068 -215787786 - HAL1b LINE L1 -953 395 70 2235 86 3 36 chr2 34900715 34901019 -215786835 + AluSx SINE Alu 9 302 -10 1184 255 94 19 chr2 34901019 34901387 -215786467 - MER69 DNA AcHobo -2 2524 2110 2015 120 28 0 chr2 34901387 34901671 -215786183 - AluSg SINE Alu -18 292 1 1184 255 94 19 chr2 34901671 34901781 -215786073 - MER69 DNA AcHobo -416 2110 2010 2273 240 48 7 chr2 34901787 34902324 -215785530 - MER69 DNA AcHobo -1967 559 1 945 216 63 151 chr2 34902688 34903256 -215784598 + LTR40a LTR ERVL 1 518 -1 1476 167 116 80 chr2 34903468 34903734 -215784120 + Charlie5 DNA MER1_type 1896 2151 -473 1006 199 0 6 chr2 34903734 34903900 -215783954 - FRAM SINE Alu -1 165 1 1476 167 116 80 chr2 34903900 34904056 -215783798 + Charlie5 DNA MER1_type 2151 2300 -324 1812 82 13 9 chr2 34904056 34904288 -215783566 + AluSq SINE Alu 1 233 -80 1476 167 116 80 chr2 34904288 34904326 -215783528 + Charlie5 DNA MER1_type 2300 2335 -289 2103 117 0 19 chr2 34904326 34904633 -215783221 + AluSg1 SINE Alu 1 301 -8 1476 167 116 80 chr2 34904633 34904852 -215783002 + Charlie5 DNA MER1_type 2335 2624 0 25 31 0 0 chr2 34904876 34904908 -215782946 + AT_rich Low_complexity Low_complexity 1 32 0 2331 103 0 7 chr2 34905034 34905344 -215782510 + AluSx SINE Alu 3 310 -2 722 309 81 27 chr2 34905355 34906512 -215781342 + L1M4 LINE L1 3117 4336 -1810 2086 133 0 3 chr2 34906628 34906928 -215780926 + AluSc SINE Alu 8 306 -3 1165 261 87 29 chr2 34906933 34907462 -215780392 - L2 LINE L2 -89 3224 2668 2690 104 3 5 chr2 34907462 34907838 -215780016 - THE1C LTR MaLR 0 375 1 1165 261 87 29 chr2 34907838 34907934 -215779920 - L2 LINE L2 -645 2668 2579 1644 285 149 14 chr2 34907936 34908662 -215779192 - L2 LINE L2 -1553 1761 938 2410 72 0 0 chr2 34908867 34909158 -215778696 - AluY SINE Alu -15 296 6 287 246 0 14 chr2 34909162 34909231 -215778623 + HAL1 LINE L1 770 837 -1670 2037 265 60 27 chr2 34909285 34910201 -215777653 + HAL1 LINE L1 970 1915 -592 1616 291 213 24 chr2 34910215 34911448 -215776406 - L2 LINE L2 -611 2703 1239 22 0 0 0 chr2 34911448 34911470 -215776384 + AT_rich Low_complexity Low_complexity 1 22 0 2778 120 38 12 chr2 34911470 34911981 -215775873 - L1MA2 LINE L1 -76 6228 5711 678 331 145 13 chr2 34911981 34912374 -215775480 - L2 LINE L2 -2096 1218 774 851 147 0 16 chr2 34912473 34912602 -215775252 - FLAM_C SINE Alu -16 127 1 31 0 0 0 chr2 34912689 34912720 -215775134 + AT_rich Low_complexity Low_complexity 1 31 0 474 153 183 8 chr2 34912880 34913011 -215774843 - L1MB3 LINE L1 -308 5866 5713 1443 201 3 7 chr2 34913024 34913322 -215774532 + L1MB3 LINE L1 5882 6178 -5 2065 73 0 8 chr2 34913383 34913643 -215774211 + AluSc SINE Alu 35 292 -17 189 0 0 0 chr2 34913650 34913671 -215774183 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2167 110 0 3 chr2 34914285 34914576 -215773278 + AluSc SINE Alu 1 290 -19 2029 92 68 81 chr2 34914826 34915195 -215772659 + THE1B LTR MaLR 1 364 0 325 319 109 29 chr2 34915708 34915846 -215772008 + MIR SINE MIR 3 151 -111 253 62 42 0 chr2 34915895 34915943 -215771911 + (TA)n Simple_repeat Simple_repeat 2 51 0 1662 97 5 0 chr2 34915948 34916165 -215771689 - AluY SINE Alu -93 218 1 579 276 136 59 chr2 34916166 34916542 -215771312 - L2 LINE L2 -154 3159 2771 864 166 0 14 chr2 34916562 34916707 -215771147 - FRAM SINE Alu -30 146 4 1266 253 106 13 chr2 34916711 34917234 -215770620 - L2 LINE L2 -522 2792 2128 1425 259 4 28 chr2 34917245 34917708 -215770146 + L1ME3 LINE L1 5461 5912 -250 2138 118 3 7 chr2 34917809 34918113 -215769741 + AluSx SINE Alu 4 306 -6 2746 155 79 219 chr2 34919048 34920551 -215767303 - MER52A LTR ERV1 0 1278 1 413 269 8 0 chr2 34920594 34920713 -215767141 - MER97a DNA MER1_type? -715 179 60 204 135 0 0 chr2 34920737 34920774 -215767080 + (CA)n Simple_repeat Simple_repeat 2 38 0 1969 108 3 28 chr2 34920811 34921098 -215766756 + AluSq SINE Alu 1 280 -33 1555 154 16 22 chr2 34921856 34921894 -215765960 + L1MA1 LINE L1 5275 5312 -979 2242 80 3 32 chr2 34921894 34922208 -215765646 + AluY SINE Alu 1 305 -6 1555 154 16 22 chr2 34922208 34922481 -215765373 + L1MA1 LINE L1 5312 5584 -707 5258 77 23 21 chr2 34922483 34922626 -215765228 + L1PA8 LINE L1 5373 5514 -658 2245 60 0 4 chr2 34922626 34922892 -215764962 + AluY SINE Alu 38 302 -9 5258 77 23 21 chr2 34922892 34923526 -215764328 + L1PA8 LINE L1 5514 6152 -20 1020 182 120 31 chr2 34923531 34924022 -215763832 + L1MA1 LINE L1 5576 6298 -4 412 134 30 0 chr2 34924057 34924124 -215763730 + Tigger2 DNA MER2_type 1 69 -2649 * 2429 136 48 19 chr2 34924114 34924324 -215763530 + Tigger2 DNA MER2_type 2273 2475 -243 2020 156 3 0 chr2 34924324 34924632 -215763222 - AluSx SINE Alu -2 310 2 2429 136 48 19 chr2 34924632 34924854 -215763000 + Tigger2 DNA MER2_type 2475 2718 0 613 206 82 0 chr2 34924854 34925024 -215762830 + L1MA8 LINE L1 6103 6286 -5 24 85 0 0 chr2 34925228 34925287 -215762567 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr2 34925964 34925985 -215761869 + AT_rich Low_complexity Low_complexity 1 21 0 199 328 78 17 chr2 34926745 34926861 -215760993 - L2 LINE L2 0 3272 3150 23 0 0 0 chr2 34926861 34926884 -215760970 + AT_rich Low_complexity Low_complexity 1 23 0 1430 137 0 19 chr2 34926884 34927096 -215760758 - AluSg/x SINE Alu -23 287 80 1278 109 0 11 chr2 34927095 34927269 -215760585 - AluSq SINE Alu -141 172 1 * 505 196 0 45 chr2 34927595 34927707 -215760147 + FAM SINE Alu 63 169 -16 285 303 155 0 chr2 34927713 34927868 -215759986 + L3 LINE CR1 597 775 -802 573 300 126 14 chr2 34927874 34928151 -215759703 + L2 LINE L2 3006 3313 0 255 366 146 8 chr2 34928331 34928577 -215759277 + L3 LINE CR1 914 1193 -384 1313 251 18 6 chr2 34928577 34928903 -215758951 + L1ME LINE L1 268 597 -5473 21 82 0 0 chr2 34929045 34929094 -215758760 + AT_rich Low_complexity Low_complexity 1 49 0 1705 148 34 0 chr2 34929330 34929593 -215758261 - AluSq SINE Alu -1 312 41 224 303 90 49 chr2 34930572 34930694 -215757160 + L2 LINE L2 2684 2810 -504 184 422 20 35 chr2 34930743 34930942 -215756912 + L2 LINE L2 2869 3064 -208 2032 71 0 8 chr2 34931344 34931598 -215756256 - AluY SINE Alu -16 295 44 30 0 0 0 chr2 34932201 34932231 -215755623 + AT_rich Low_complexity Low_complexity 1 30 0 829 262 74 4 chr2 34983420 34983691 -215704163 - L1ME3A LINE L1 -9 6161 5872 5678 226 41 34 chr2 34983754 34985531 -215702323 - L1ME3A LINE L1 -816 5330 3569 399 41 0 0 chr2 34985857 34985906 -215701948 + (TG)n Simple_repeat Simple_repeat 2 50 0 1719 268 29 34 chr2 34985944 34986556 -215701298 - MER90 LTR ERV1 -4 610 2 2334 50 13 35 chr2 34987770 34988088 -215699766 - AluY SINE Alu 0 311 1 914 231 42 73 chr2 34989168 34989454 -215698400 - LTR40a LTR ERVL -15 504 228 284 303 173 14 chr2 34989748 34989956 -215697898 - L1M4 LINE L1 -1955 4191 3951 2204 127 0 0 chr2 34990139 34990447 -215697407 + AluSp SINE Alu 1 308 -5 247 313 17 9 chr2 34990562 34990677 -215697177 - L1M4 LINE L1 -2455 3691 3576 7601 27 2 2 chr2 34990678 34991975 -215695879 - L1PA4 LINE L1 -3 6152 4855 479 171 45 0 chr2 34991975 34992063 -215695791 + AluJ/FLAM SINE Alu 9 100 -212 1399 201 61 0 chr2 34992245 34992361 -215695493 + AluJo SINE Alu 1 108 -204 186 43 0 0 chr2 34992361 34992384 -215695470 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1399 201 61 0 chr2 34992384 34992546 -215695308 + AluJo SINE Alu 108 296 -16 5111 150 50 4 chr2 34992750 34993906 -215693948 - L1PA15 LINE L1 0 6165 4963 22 0 0 0 chr2 34995469 34995491 -215692363 + AT_rich Low_complexity Low_complexity 1 22 0 247 227 163 35 chr2 34996457 34996598 -215691256 - MIR SINE MIR 0 262 104 470 244 64 39 chr2 34997666 34997822 -215690032 - MIR SINE MIR -12 250 91 22 56 0 0 chr2 34998220 34998256 -215689598 + AT_rich Low_complexity Low_complexity 1 36 0 303 277 35 21 chr2 34998772 34998913 -215688941 + (CATA)n Simple_repeat Simple_repeat 2 144 0 401 117 55 0 chr2 34999261 34999389 -215688465 + (TA)n Simple_repeat Simple_repeat 1 135 0 227 215 15 0 chr2 35000679 35000744 -215687110 + CT-rich Low_complexity Low_complexity 3 68 0 325 311 42 34 chr2 35000885 35001004 -215686850 - L2 LINE L2 0 3313 3194 272 366 18 0 chr2 35001264 35001376 -215686478 + HERVL LTR ERVL 3501 3614 -2040 347 358 81 32 chr2 35001470 35001616 -215686238 + HERVL LTR ERVL 3773 3910 -1854 2150 108 7 7 chr2 35001616 35001912 -215685942 + AluSc SINE Alu 1 296 -13 347 358 81 32 chr2 35001912 35002271 -215685583 + HERVL LTR ERVL 3910 4303 -1461 770 222 0 66 chr2 35002273 35002471 -215685383 + LTR41 LTR ERVL 8 192 -581 320 192 33 60 chr2 35002710 35002841 -215685013 + LTR41 LTR ERVL 660 794 -1 1756 209 113 20 chr2 35003015 35003459 -215684395 - MER67D LTR ERV1 -1 513 29 1242 167 193 36 chr2 35004111 35004500 -215683354 - LTR7 LTR ERV1 0 450 1 387 227 117 13 chr2 35005009 35005163 -215682691 + L1ME3A LINE L1 5974 6143 -27 959 158 84 65 chr2 35007176 35007391 -215680463 + MER20 DNA MER1_type 1 219 0 321 89 0 0 chr2 35007942 35007987 -215679867 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 5369 73 46 27 chr2 35008084 35008850 -215679004 + LTR17 LTR ERV1 1 780 0 396 270 163 20 chr2 35009650 35009846 -215678008 + MLT1J2 LTR MaLR 15 238 -212 229 329 0 0 chr2 35010052 35010128 -215677726 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 2268 64 10 7 chr2 35010161 35010457 -215677397 - AluY SINE Alu -14 297 1 260 318 9 19 chr2 35011434 35011541 -215676313 + MIR SINE MIR 101 206 -56 1460 303 98 22 chr2 35011572 35012384 -215675470 - L2 LINE L2 -13 3300 2424 601 200 0 73 chr2 35012814 35012964 -215674890 + Ricksha DNA DNA 758 896 -2350 361 285 42 12 chr2 35013022 35013187 -215674667 - L1M4 LINE L1 -3042 3340 3171 557 283 43 17 chr2 35013221 35013754 -215674100 - L1M4 LINE L1 -3806 2576 2025 2243 68 10 24 chr2 35015387 35015681 -215672173 + AluY SINE Alu 1 290 -21 1905 128 64 19 chr2 35016214 35016573 -215671281 - THE1C LTR MaLR 0 375 1 874 249 10 5 chr2 35017539 35017748 -215670106 + MER58A DNA MER1_type 10 219 -5 1697 128 3 96 chr2 35018399 35018786 -215669068 - AluJo SINE Alu 0 355 1 1724 184 54 20 chr2 35019443 35019850 -215668004 + L1MA8 LINE L1 5869 6289 -2 1302 202 174 3 chr2 35019964 35020315 -215667539 + LTR45B LTR ERV1 3 413 -76 387 0 0 0 chr2 35020737 35020780 -215667074 + (TA)n Simple_repeat Simple_repeat 2 44 0 2654 239 86 16 chr2 35020787 35021760 -215666094 + L1PBa LINE L1 6 1046 -5817 9755 217 24 13 chr2 35021763 35025721 -215662133 + L1PBa LINE L1 1093 5274 -1588 5091 107 10 5 chr2 35025710 35026502 -215661352 + L1PB1 LINE L1 5356 6151 0 * 1385 230 45 41 chr2 35026533 35026976 -215660878 - MER31B LTR ERV1 -21 445 1 2481 70 0 6 chr2 35028376 35028689 -215659165 - AluY SINE Alu 0 311 1 215 324 67 109 chr2 35028789 35029027 -215658827 - L2 LINE L2 -14 3258 3031 186 227 0 0 chr2 35029310 35029354 -215658500 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 354 321 78 64 chr2 35029433 35029841 -215658013 + L1M4 LINE L1 3365 3778 -2368 248 281 63 54 chr2 35029881 35030102 -215657752 + L1M4 LINE L1 3875 4097 -2049 437 327 77 13 chr2 35030121 35030421 -215657433 - L1MEd LINE L1 -4944 1175 857 225 234 0 0 chr2 35030892 35030939 -215656915 + MER69 DNA AcHobo 2477 2523 -3 335 181 14 0 chr2 35031178 35031250 -215656604 + (TA)n Simple_repeat Simple_repeat 2 74 0 1937 147 40 28 chr2 35031254 35031608 -215656246 - THE1B LTR MaLR -5 359 2 201 263 0 0 chr2 35031608 35031665 -215656189 + (TA)n Simple_repeat Simple_repeat 1 57 0 240 314 47 0 chr2 35032378 35032464 -215655390 + L3 LINE CR1 665 754 -823 199 325 61 26 chr2 35032634 35032748 -215655106 + L3 LINE CR1 1007 1124 -453 2349 119 13 24 chr2 35032765 35033143 -215654711 - THE1C LTR MaLR 0 375 2 303 263 13 0 chr2 35033551 35033627 -215654227 + L3 LINE CR1 1338 1414 -163 1594 202 3 18 chr2 35033874 35034206 -215653648 - MLT1A1 LTR MaLR -5 360 34 764 230 31 0 chr2 35035028 35035189 -215652665 - MER45A DNA AcHobo -12 166 1 376 174 22 11 chr2 35035653 35035745 -215652109 + GA-rich Low_complexity Low_complexity 4 96 0 23 54 0 0 chr2 35036233 35036270 -215651584 + AT_rich Low_complexity Low_complexity 1 37 0 2332 48 0 61 chr2 35036373 35036683 -215651171 + AluY SINE Alu 1 291 -20 1714 73 11 4 chr2 35038435 35038695 -215649159 - LTR7 LTR ERV1 -2 448 187 1330 72 0 0 chr2 35038696 35038877 -215648977 - HERVH LTR ERV1 -3045 4668 4488 3226 111 0 6 chr2 35038879 35039384 -215648470 - HERVH LTR ERV1 -3720 3993 3492 859 135 7 0 chr2 35039376 35039524 -215648330 - HERVH LTR ERV1 -4425 3288 3140 * 2307 110 0 18 chr2 35039518 35039899 -215647955 - HERVH LTR ERV1 -4726 2987 2614 2566 107 92 7 chr2 35039899 35040312 -215647542 + LTR7 LTR ERV1 1 448 -2 2976 131 2 2 chr2 35040314 35040788 -215647066 + HERVH LTR ERV1 1 474 -7239 6426 113 12 12 chr2 35040790 35041836 -215646018 + HERVH LTR ERV1 1942 2987 -4726 810 131 41 0 chr2 35041830 35041975 -215645879 + HERVH LTR ERV1 3140 3290 -4423 * 3125 119 0 6 chr2 35041965 35042470 -215645384 + HERVH LTR ERV1 3492 3993 -3720 1251 100 0 0 chr2 35042472 35042652 -215645202 + HERVH LTR ERV1 4488 4667 -3046 * 4073 90 2 0 chr2 35042648 35043259 -215644595 + HERVH LTR ERV1 5769 6380 -1333 * 7321 96 21 6 chr2 35043248 35044390 -215643464 + HERVH LTR ERV1 6551 7709 -4 11101 120 16 23 chr2 35044390 35046344 -215641510 - HERVH LTR ERV1 -5095 2618 491 2009 90 6 6 chr2 35046380 35046709 -215641145 - LTR7 LTR ERV1 -8 442 25 374 205 13 109 chr2 35047434 35047590 -215640264 + L1MA9 LINE L1 6143 6290 -8 665 126 11 153 chr2 35048288 35048478 -215639376 + AluY SINE Alu 136 298 -13 2889 112 18 30 chr2 35048486 35048786 -215639068 - L1P4 LINE L1 -408 5758 5465 2244 101 0 16 chr2 35048786 35049102 -215638752 + AluSx SINE Alu 1 311 -1 2889 112 18 30 chr2 35049102 35049308 -215638546 - L1P4 LINE L1 -701 5465 5258 2092 178 18 5 chr2 35049308 35049691 -215638163 + L1PA16 LINE L1 5759 6157 -9 216 274 0 0 chr2 35049720 35049771 -215638083 + CT-rich Low_complexity Low_complexity 2 52 0 26 50 0 0 chr2 35049786 35049826 -215638028 + AT_rich Low_complexity Low_complexity 1 40 0 2420 169 17 0 chr2 35050083 35050502 -215637352 + MSTC LTR MaLR 1 426 -2 271 233 63 75 chr2 35050535 35050583 -215637271 - L1MA10 LINE L1 -9 6325 6278 653 238 63 78 chr2 35050583 35050613 -215637241 - L1ME1 LINE L1 -44 6122 6093 180 0 0 0 chr2 35050613 35050633 -215637221 + (TA)n Simple_repeat Simple_repeat 1 20 0 653 238 63 78 chr2 35050633 35051001 -215636853 - L1ME1 LINE L1 -73 6093 5730 231 36 0 0 chr2 35051811 35051839 -215636015 + (TG)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 35052981 35053003 -215634851 + AT_rich Low_complexity Low_complexity 1 22 0 618 227 108 82 chr2 35053156 35053605 -215634249 - MER110A LTR ERV1 -2 466 26 207 0 0 0 chr2 35053666 35053689 -215634165 + (T)n Simple_repeat Simple_repeat 1 23 0 392 197 0 0 chr2 35053693 35053764 -215634090 + MER58 DNA MER1_type 129 2404 -16 2424 74 3 6 chr2 35054009 35054321 -215633533 - AluY SINE Alu 0 311 1 2454 184 64 2 chr2 35054941 35055426 -215632428 + MLT2B2 LTR ERVL 1 515 0 1163 173 53 4 chr2 35056282 35056507 -215631347 + MER46A DNA MER2_type 1 236 0 400 290 71 47 chr2 35058093 35058517 -215629337 - HAL1 LINE L1 -1004 1503 1070 255 93 0 0 chr2 35058831 35058874 -215628980 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 913 9 0 0 chr2 35058909 35059015 -215628839 - L1PA2 LINE L1 0 6155 6050 2105 99 7 7 chr2 35059016 35059299 -215628555 - AluSq SINE Alu -30 283 1 504 348 118 10 chr2 35060271 35060567 -215627287 + L3 LINE CR1 1239 1566 -11 21 36 0 0 chr2 35061228 35061256 -215626598 + AT_rich Low_complexity Low_complexity 1 28 0 1179 139 20 68 chr2 35061351 35061405 -215626449 + L1MA1 LINE L1 6003 6058 -244 2366 86 0 16 chr2 35061405 35061720 -215626134 + AluY SINE Alu 1 310 -1 1179 139 20 68 chr2 35061720 35061916 -215625938 + L1MA1 LINE L1 6058 6241 -61 433 230 80 16 chr2 35062361 35062548 -215625306 - L1ME3 LINE L1 -251 5911 5713 427 343 57 23 chr2 35062742 35063042 -215624812 - L1M4 LINE L1 -1338 4808 4499 733 83 0 0 chr2 35063214 35063310 -215624544 - Harlequin LTR ERV1 -6539 357 262 * 2712 98 5 0 chr2 35063305 35063683 -215624171 - Harlequin LTR ERV1 -6516 380 1 3727 57 43 0 chr2 35063683 35064153 -215623701 - LTR2B LTR ERV1 0 490 1 231 319 33 9 chr2 35064169 35064379 -215623475 - L1M4 LINE L1 -3457 2689 2475 10639 166 44 64 chr2 35064397 35065578 -215622276 - L1MA3 LINE L1 0 7724 6520 2319 90 16 16 chr2 35065578 35065889 -215621965 + AluSq SINE Alu 1 311 -2 10639 166 44 64 chr2 35065889 35067514 -215620340 - L1MA3 LINE L1 -1204 6520 4863 1134 138 0 33 chr2 35067514 35067695 -215620159 - AluSg/x SINE Alu -17 295 121 1374 156 148 11 chr2 35067697 35067960 -215619894 - AluSx SINE Alu -2 300 2 10639 166 44 64 chr2 35067960 35068756 -215619098 - L1MA3 LINE L1 -2862 4862 4021 8088 210 25 34 chr2 35068750 35069754 -215618100 - L1MA3 LINE L1 -4716 2849 1837 * 2657 90 20 0 chr2 35069754 35070111 -215617743 + THE1B LTR MaLR 1 364 0 8088 210 25 34 chr2 35070111 35071590 -215616264 - L1MA3 LINE L1 -5728 1837 16 300 250 56 19 chr2 35071703 35071863 -215615991 - L1M4 LINE L1 -3802 2344 2179 387 239 14 14 chr2 35072015 35072157 -215615697 + (TA)n Simple_repeat Simple_repeat 2 143 0 232 289 12 12 chr2 35072179 35072262 -215615592 + CT-rich Low_complexity Low_complexity 2 84 0 292 238 119 12 chr2 35072262 35072346 -215615508 - Charlie8 DNA MER1_type -2169 248 156 944 204 8 122 chr2 35072359 35072711 -215615143 - L1MD2 LINE L1 -13 6346 6035 258 296 14 99 chr2 35072756 35072898 -215614956 - Charlie8 DNA MER1_type -2284 133 4 432 333 29 34 chr2 35073493 35073697 -215614157 - MIR SINE MIR -19 243 41 1556 216 29 20 chr2 35074588 35074939 -215612915 - MLT1A1 LTR MaLR 0 365 12 21 0 0 0 chr2 35075139 35075160 -215612694 + AT_rich Low_complexity Low_complexity 1 21 0 200 271 42 0 chr2 35075401 35075497 -215612357 + (TA)n Simple_repeat Simple_repeat 2 101 0 423 222 16 95 chr2 35075500 35075626 -215612228 - MIR SINE MIR -57 205 90 211 224 0 20 chr2 35076057 35076106 -215611748 + (TATG)n Simple_repeat Simple_repeat 2 49 0 480 296 172 0 chr2 35076562 35076731 -215611123 + MIR SINE MIR 8 205 -57 429 302 47 51 chr2 35077498 35077713 -215610141 - MIR SINE MIR -21 241 28 1127 224 82 23 chr2 35078218 35078522 -215609332 - MLT1B LTR MaLR -66 324 3 223 366 122 23 chr2 35078652 35078873 -215608981 - MIR SINE MIR 0 262 20 27 29 0 0 chr2 35080779 35080813 -215607041 + AT_rich Low_complexity Low_complexity 1 34 0 1684 135 77 40 chr2 35081089 35081414 -215606440 + MER1B DNA MER1_type 1 337 0 310 148 0 0 chr2 35081858 35081912 -215605942 + L1ME4a LINE L1 5464 5517 -657 357 279 55 50 chr2 35082200 35082419 -215605435 + L1ME4a LINE L1 5767 5986 -135 196 161 0 0 chr2 35082722 35082753 -215605101 + MIR SINE MIR 118 148 -60 225 250 73 29 chr2 35082840 35082908 -215604946 - L2 LINE L2 -2 3270 3200 413 49 0 16 chr2 35083706 35083767 -215604087 + (TA)n Simple_repeat Simple_repeat 2 61 0 192 333 61 26 chr2 35083910 35084024 -215603830 - MIR3 SINE MIR -6 202 85 15475 51 6 1 chr2 35085242 35087952 -215599902 - L1PA5 LINE L1 0 6154 3419 472 33 0 0 chr2 35087952 35088013 -215599841 + L1P LINE L1 3044 3104 -3042 2090 111 7 3 chr2 35088032 35088321 -215599533 - AluSg SINE Alu -20 290 1 336 253 0 0 chr2 35089672 35089755 -215598099 - L1M4 LINE L1 -1273 4873 4791 1751 147 0 14 chr2 35089914 35090193 -215597661 + AluSg SINE Alu 33 307 -3 22 56 0 0 chr2 35091374 35091410 -215596444 + AT_rich Low_complexity Low_complexity 1 36 0 251 246 16 0 chr2 35092146 35092207 -215595647 - L1MC/D LINE L1 -2057 5751 5690 326 283 75 53 chr2 35092660 35092847 -215595007 + HAL1 LINE L1 2304 2494 -13 223 254 51 0 chr2 35092947 35093006 -215594848 + MIR SINE MIR 118 179 -83 374 69 17 0 chr2 35094122 35094180 -215593674 + (TG)n Simple_repeat Simple_repeat 2 60 0 201 135 54 0 chr2 35094181 35094218 -215593636 + T-rich Low_complexity Low_complexity 3 41 0 192 319 83 14 chr2 35094522 35094666 -215593188 + MIR SINE MIR 49 202 -60 1437 191 43 28 chr2 35094666 35094948 -215592906 + AluJo SINE Alu 1 286 -26 328 216 20 0 chr2 35094948 35095050 -215592804 + (TA)n Simple_repeat Simple_repeat 1 104 0 1707 199 44 0 chr2 35095265 35095586 -215592268 + MLT1A1 LTR MaLR 1 335 -30 667 152 0 0 chr2 35095580 35095685 -215592169 + MLT1A1 LTR MaLR 260 364 -1 * 2204 100 0 7 chr2 35095722 35096013 -215591841 - AluSc SINE Alu -19 290 2 5454 164 11 1 chr2 35096106 35096996 -215590858 + MER54A LTR ERVL 3 901 0 921 204 0 0 chr2 35097107 35097269 -215590585 + MER58B DNA MER1_type 176 337 -4 233 119 24 0 chr2 35097882 35097924 -215589930 + (TA)n Simple_repeat Simple_repeat 1 43 0 249 83 0 0 chr2 35098071 35098107 -215589747 + (TC)n Simple_repeat Simple_repeat 1 36 0 220 311 42 8 chr2 35098473 35098592 -215589262 + L2 LINE L2 47 169 -3145 984 269 231 43 chr2 35098599 35098967 -215588887 + L2 LINE L2 337 634 -2680 1762 134 22 51 chr2 35098967 35099281 -215588573 - AluSx SINE Alu -7 305 1 984 269 231 43 chr2 35099281 35099566 -215588288 + L2 LINE L2 634 1113 -2201 816 248 140 0 chr2 35100298 35100586 -215587268 + L1ME3A LINE L1 5569 5905 -265 484 239 102 44 chr2 35100596 35100801 -215587053 + L1ME3A LINE L1 5954 6170 0 183 129 0 0 chr2 35101663 35101694 -215586160 + (CA)n Simple_repeat Simple_repeat 1 31 0 2272 88 0 26 chr2 35101777 35102082 -215585772 - AluY SINE Alu -14 297 1 724 160 112 12 chr2 35102306 35102475 -215585379 - MER53 DNA DNA -3 186 1 269 313 148 17 chr2 35103134 35103425 -215584429 - MARNA DNA Mariner -15 571 243 1921 145 0 43 chr2 35103979 35104348 -215583506 + AluJb SINE Alu 1 355 0 659 178 123 0 chr2 35104620 35104766 -215583088 - L1MC2 LINE L1 -26 6318 6155 510 17 0 0 chr2 35104769 35104828 -215583026 + (T)n Simple_repeat Simple_repeat 1 59 0 3422 51 14 2 chr2 35105593 35106026 -215581828 + L1PA7 LINE L1 5713 6150 -4 824 268 27 58 chr2 35106178 35106351 -215581503 - AluJo SINE Alu -15 287 125 2300 109 0 0 chr2 35106351 35106653 -215581201 - AluSg1 SINE Alu -7 302 1 824 268 27 58 chr2 35106653 35106774 -215581080 - AluJo SINE Alu -177 125 2 357 259 88 41 chr2 35107153 35107323 -215580531 - MIR SINE MIR -1 261 84 26 0 0 0 chr2 35107930 35107956 -215579898 + AT_rich Low_complexity Low_complexity 1 26 0 2242 98 14 7 chr2 35108303 35108600 -215579254 + AluSg SINE Alu 1 299 -11 2308 106 7 0 chr2 35109347 35109650 -215578204 + AluSx SINE Alu 1 305 -7 317 305 34 45 chr2 35110793 35110970 -215576884 + MLT1J LTR MaLR 287 461 -50 1425 179 65 3 chr2 35112008 35112381 -215575473 + L1MC2 LINE L1 5734 6170 -174 2437 93 3 0 chr2 35112382 35112715 -215575139 + AluSq SINE Alu 1 334 0 10464 53 13 56 chr2 35112821 35114242 -215573612 - SVA Other Other 0 1386 27 472 345 49 40 chr2 35114247 35114996 -215572858 + MER65C-int LTR ERV1 4209 4871 0 1827 206 28 47 chr2 35114996 35115466 -215572388 + MER65C LTR ERV1 1 461 0 413 292 139 5 chr2 35116645 35116854 -215571000 + L1ME4a LINE L1 5662 5898 -223 1813 164 9 21 chr2 35117564 35117899 -215569955 - MER2 DNA MER2_type -14 331 1 302 165 13 63 chr2 35118586 35118665 -215569189 - MLT1H LTR MaLR -420 129 55 181 318 32 0 chr2 35119095 35119158 -215568696 - MIR SINE MIR -163 99 35 240 373 51 8 chr2 35121744 35121862 -215565992 + L2 LINE L2 3103 3225 -47 4867 103 12 120 chr2 35121863 35122785 -215565069 - LTR12 LTR ERV1 0 826 5 2448 149 76 24 chr2 35122801 35123378 -215564476 - pTR5 LTR ERV1 -1094 1344 738 803 188 0 0 chr2 35123941 35124074 -215563780 - FLAM_A SINE Alu 0 133 1 267 208 0 0 chr2 35124114 35124167 -215563687 - L2 LINE L2 0 3313 3261 627 250 144 55 chr2 35124458 35124829 -215563025 + MLT1C LTR MaLR 1 408 -59 186 43 0 0 chr2 35125190 35125213 -215562641 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2163 117 3 7 chr2 35126076 35126383 -215561471 + AluSx SINE Alu 1 306 -6 2741 156 79 219 chr2 35127318 35128821 -215559033 - MER52A LTR ERV1 0 1278 1 413 269 8 0 chr2 35128864 35128983 -215558871 - MER97c DNA MER1_type? -911 179 60 204 135 0 0 chr2 35129007 35129044 -215558810 + (CA)n Simple_repeat Simple_repeat 2 38 0 1969 108 3 28 chr2 35129081 35129368 -215558486 + AluSq SINE Alu 1 280 -33 1555 154 16 22 chr2 35130126 35130164 -215557690 + L1MA1 LINE L1 5275 5312 -979 2277 80 3 29 chr2 35130164 35130477 -215557377 + AluY SINE Alu 1 305 -6 1555 154 16 22 chr2 35130477 35130750 -215557104 + L1MA1 LINE L1 5312 5584 -707 5258 77 23 21 chr2 35130752 35130895 -215556959 + L1PA8 LINE L1 5373 5514 -658 2245 60 0 4 chr2 35130895 35131161 -215556693 + AluY SINE Alu 38 302 -9 5258 77 23 21 chr2 35131161 35131795 -215556059 + L1PA8 LINE L1 5514 6152 -20 1020 182 120 31 chr2 35131800 35132291 -215555563 + L1MA1 LINE L1 5576 6298 -4 412 134 30 0 chr2 35132326 35132393 -215555461 + Tigger2 DNA MER2_type 1 69 -2649 * 2429 136 48 19 chr2 35132383 35132593 -215555261 + Tigger2 DNA MER2_type 2273 2475 -243 2020 156 3 0 chr2 35132593 35132901 -215554953 - AluSx SINE Alu -2 310 2 2429 136 48 19 chr2 35132901 35133123 -215554731 + Tigger2 DNA MER2_type 2475 2718 0 613 206 82 0 chr2 35133123 35133293 -215554561 + L1MA8 LINE L1 6103 6286 -5 24 85 0 0 chr2 35133497 35133556 -215554298 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr2 35134233 35134254 -215553600 + AT_rich Low_complexity Low_complexity 1 21 0 199 328 78 17 chr2 35135014 35135130 -215552724 - L2 LINE L2 0 3272 3150 23 0 0 0 chr2 35135130 35135153 -215552701 + AT_rich Low_complexity Low_complexity 1 23 0 1430 137 0 19 chr2 35135153 35135365 -215552489 - AluSg/x SINE Alu -23 289 82 1278 109 0 11 chr2 35135364 35135538 -215552316 - AluSq SINE Alu -141 172 1 * 500 204 0 44 chr2 35135862 35135975 -215551879 + FAM SINE Alu 61 168 -17 285 303 155 0 chr2 35135981 35136136 -215551718 + L3 LINE CR1 597 775 -802 573 300 126 14 chr2 35136142 35136419 -215551435 + L2 LINE L2 3006 3313 0 255 366 146 8 chr2 35136599 35136845 -215551009 + L3 LINE CR1 914 1193 -384 1313 251 18 6 chr2 35136845 35137171 -215550683 + L1ME LINE L1 268 597 -5473 21 82 0 0 chr2 35137313 35137362 -215550492 + AT_rich Low_complexity Low_complexity 1 49 0 1705 148 34 0 chr2 35137598 35137861 -215549993 - AluSq SINE Alu -1 312 41 224 303 90 49 chr2 35138840 35138962 -215548892 + L2 LINE L2 2684 2810 -504 184 422 20 35 chr2 35139011 35139210 -215548644 + L2 LINE L2 2869 3064 -208 2032 71 0 8 chr2 35139612 35139866 -215547988 - AluY SINE Alu -16 295 44 30 0 0 0 chr2 35140469 35140499 -215547355 + AT_rich Low_complexity Low_complexity 1 30 0 378 0 0 0 chr2 35140912 35140954 -215546900 + (CA)n Simple_repeat Simple_repeat 1 42 0 286 340 31 53 chr2 35141495 35141813 -215546041 - MER102b DNA MER1_type -16 325 15 262 196 0 0 chr2 35142154 35142200 -215545654 + MER58B DNA MER1_type 292 337 -4 1641 170 40 34 chr2 35142248 35142601 -215545253 - MLT1A1 LTR MaLR -10 355 1 21 57 0 0 chr2 35143091 35143126 -215544728 + AT_rich Low_complexity Low_complexity 1 35 0 344 103 17 0 chr2 35143587 35143645 -215544209 + (TC)n Simple_repeat Simple_repeat 2 60 0 2272 91 0 11 chr2 35144174 35144502 -215543352 - AluY SINE Alu 0 326 2 28 0 0 0 chr2 35144505 35144533 -215543321 + AT_rich Low_complexity Low_complexity 1 28 0 1860 102 4 0 chr2 35144540 35144814 -215543040 - L1MA2 LINE L1 -8 6296 6022 21 57 0 0 chr2 35145341 35145376 -215542478 + AT_rich Low_complexity Low_complexity 1 35 0 1333 212 106 44 chr2 35145413 35145752 -215542102 + MLT1A1 LTR MaLR 6 365 0 497 307 35 25 chr2 35145968 35146170 -215541684 - MIR SINE MIR -34 228 25 299 250 115 48 chr2 35146325 35146429 -215541425 + MIR3 SINE MIR 88 198 -10 1764 158 16 9 chr2 35148516 35148838 -215539016 - L1MA7 LINE L1 -390 5901 5578 1555 176 45 21 chr2 35148838 35149140 -215538714 + L1MA7 LINE L1 5909 6225 -66 315 49 0 0 chr2 35149140 35149181 -215538673 + (TG)n Simple_repeat Simple_repeat 2 42 0 1555 176 45 21 chr2 35149181 35149250 -215538604 + L1MA7 LINE L1 6225 6291 0 27 0 0 0 chr2 35150330 35150357 -215537497 + AT_rich Low_complexity Low_complexity 1 27 0 2246 124 59 0 chr2 35151229 35151583 -215536271 - THE1C LTR MaLR 0 375 1 9546 118 53 4 chr2 35151583 35153089 -215534765 - THE1C-int LTR MaLR 0 1580 1 2425 108 44 8 chr2 35153089 35153451 -215534403 - THE1C LTR MaLR 0 375 1 1537 158 33 0 chr2 35153691 35153963 -215533891 - L1PA16 LINE L1 -22 6144 5864 1330 154 126 14 chr2 35154049 35154342 -215533512 + MER44D DNA MER2_type 1 596 -13 1237 188 19 13 chr2 35154348 35154663 -215533191 - MER33 DNA MER1_type -36 288 1 260 238 12 0 chr2 35155666 35155750 -215532104 + (CATATA)n Simple_repeat Simple_repeat 4 88 0 213 175 0 0 chr2 35155804 35155844 -215532010 + (TATATG)n Simple_repeat Simple_repeat 5 44 0 491 113 0 25 chr2 35155844 35155924 -215531930 - L1MC1 LINE L1 -5 6328 6251 198 268 18 36 chr2 35157413 35157469 -215530385 - MIR SINE MIR -201 61 7 1960 234 17 35 chr2 35157474 35158017 -215529837 - LTR31 LTR ERV1 -12 607 75 872 184 69 0 chr2 35159027 35159201 -215528653 - MER5A DNA MER1_type -3 186 1 492 214 61 0 chr2 35159206 35159304 -215528550 + MER5A DNA MER1_type 86 189 0 238 310 115 0 chr2 35159450 35159537 -215528317 - L2 LINE L2 -54 3218 3122 192 182 45 0 chr2 35159739 35159783 -215528071 - L2 LINE L2 -291 2981 2936 13721 148 24 12 chr2 35160393 35160451 -215527403 + Tigger1 DNA MER2_type 1 57 -2361 1839 162 0 3 chr2 35160451 35160753 -215527101 - AluSx SINE Alu -11 301 1 13721 148 24 12 chr2 35160753 35163082 -215524772 + Tigger1 DNA MER2_type 57 2417 -1 3616 105 2 2 chr2 35163227 35163752 -215524102 - L1P3 LINE L1 -1040 5106 4582 3007 78 22 0 chr2 35163750 35164315 -215523539 + L1P3 LINE L1 5099 5671 -483 * 4560 53 9 0 chr2 35164385 35164953 -215522901 + L1PA7 LINE L1 5561 6133 -21 1628 194 22 3 chr2 35164967 35165322 -215522532 + L1MA5 LINE L1 5939 6300 0 1926 61 0 8 chr2 35166654 35166900 -215520954 - AluY SINE Alu -12 299 56 392 300 106 44 chr2 35167688 35167915 -215519939 + MIR SINE MIR 9 249 -13 1887 181 56 42 chr2 35168109 35168484 -215519370 - MER47B DNA MER2_type -1908 415 32 188 67 33 0 chr2 35168484 35168514 -215519340 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1887 181 56 42 chr2 35168514 35168547 -215519307 - MER47B DNA MER2_type -2291 32 1 295 327 80 6 chr2 35169488 35169650 -215518204 - MLT1J1 LTR MaLR 0 446 273 * 302 213 40 0 chr2 35169648 35169723 -215518131 - MLT1J2 LTR MaLR -372 78 1 206 173 0 19 chr2 35169957 35170009 -215517845 + (TA)n Simple_repeat Simple_repeat 1 51 0 1668 237 104 16 chr2 35170275 35171466 -215516388 - L1MC4 LINE L1 -133 7909 6463 413 258 48 16 chr2 35172271 35172395 -215515459 - L2 LINE L2 0 3313 3186 2242 271 28 40 chr2 35173993 35174059 -215513795 + L1ME LINE L1 34 99 -5971 1973 149 10 3 chr2 35174059 35174354 -215513500 + AluSx SINE Alu 1 297 -15 2242 271 28 40 chr2 35174354 35175122 -215512732 + L1ME LINE L1 99 858 -5212 872 113 10 113 chr2 35175251 35175454 -215512400 - L1MA9 LINE L1 0 6312 6131 180 111 0 0 chr2 35175671 35175698 -215512156 + (GGAGAA)n Simple_repeat Simple_repeat 1 27 0 286 261 163 22 chr2 35175704 35175796 -215512058 + L2 LINE L2 3202 3306 -7 1623 176 7 10 chr2 35175796 35176086 -215511768 + AluJo SINE Alu 1 289 -23 207 214 0 0 chr2 35176094 35176136 -215511718 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 388 332 53 29 chr2 35176672 35176916 -215510938 - MLT1K LTR MaLR -17 571 322 180 152 0 0 chr2 35177192 35177225 -215510629 + GA-rich Low_complexity Low_complexity 2 34 0 639 282 64 46 chr2 35177269 35177549 -215510305 + LTR16A1 LTR ERVL 168 452 -5 243 0 0 0 chr2 35177731 35177758 -215510096 + (T)n Simple_repeat Simple_repeat 1 27 0 8407 123 12 8 chr2 35178233 35179314 -215508540 + HSMAR2 DNA Mariner 2 1090 -212 2500 105 28 22 chr2 35179314 35179676 -215508178 + THE1B LTR MaLR 1 364 0 8407 123 12 8 chr2 35179676 35179889 -215507965 + HSMAR2 DNA Mariner 1090 1301 -1 235 333 75 17 chr2 35180332 35180452 -215507402 + L2 LINE L2 3143 3269 -3 223 263 36 57 chr2 35180574 35180676 -215507178 - MIR SINE MIR -91 117 19 22 0 0 0 chr2 35181062 35181084 -215506770 + AT_rich Low_complexity Low_complexity 1 22 0 2138 149 92 20 chr2 35181380 35181783 -215506071 + MSTB1 LTR MaLR 1 432 0 194 382 0 0 chr2 35182128 35182204 -215505650 + L3 LINE CR1 188 263 -1314 183 376 24 0 chr2 35182515 35182600 -215505254 - MER5B DNA MER1_type -4 174 88 904 284 120 40 chr2 35183410 35183885 -215503969 + LTR33A LTR ERVL 11 523 0 5060 127 21 4 chr2 35183937 35184727 -215503127 - L1PA15 LINE L1 -8 6157 5354 307 322 147 17 chr2 35184890 35185067 -215502787 + MIR SINE MIR 53 252 -10 649 270 38 6 chr2 35185892 35186051 -215501803 - MER45A DNA AcHobo 0 178 15 217 131 66 49 chr2 35186346 35186407 -215501447 + A-rich Low_complexity Low_complexity 1 62 0 3846 207 45 17 chr2 35186438 35187382 -215500472 + L1PA13 LINE L1 1 1009 -5778 15214 167 12 13 chr2 35187382 35187605 -215500249 + L1PA13 LINE L1 2903 3125 -3689 357 109 0 0 chr2 35187605 35187660 -215500194 + (CA)n Simple_repeat Simple_repeat 2 56 0 15214 167 12 13 chr2 35187660 35190406 -215497448 + L1PA13 LINE L1 3125 5895 -919 5360 151 34 35 chr2 35190406 35191478 -215496376 - MER11C LTR ERVK 0 1071 1 15214 167 12 13 chr2 35191478 35192397 -215495457 + L1PA13 LINE L1 5895 6814 0 744 285 169 56 chr2 35192628 35193094 -215494760 - MLT2E LTR ERVL -100 528 10 1674 196 50 3 chr2 35193550 35193928 -215493926 + L1MA8 LINE L1 5895 6290 -1 428 323 104 30 chr2 35194018 35194421 -215493433 + L1ME LINE L1 4931 5363 -783 270 312 123 28 chr2 35194434 35194751 -215493103 + L1ME LINE L1 5383 5729 -435 253 246 0 0 chr2 35194872 35194929 -215492925 + (TA)n Simple_repeat Simple_repeat 1 57 0 26 30 0 0 chr2 35195253 35195286 -215492568 + AT_rich Low_complexity Low_complexity 1 33 0 354 45 0 0 chr2 35196462 35196506 -215491348 + (TG)n Simple_repeat Simple_repeat 2 45 0 243 336 114 7 chr2 35196654 35196803 -215491051 + LTR16C LTR ERVL 327 491 0 482 333 40 17 chr2 35197890 35198064 -215489790 + MIR SINE MIR 2 179 -83 1443 67 0 0 chr2 35198086 35198265 -215489589 + L1PA7 LINE L1 5963 6141 -13 527 296 82 19 chr2 35198469 35198675 -215489179 + MIR SINE MIR 9 227 -35 4044 223 60 16 chr2 35198677 35198795 -215489059 + MER45B DNA AcHobo 4 115 -1466 2171 104 0 13 chr2 35198795 35199094 -215488760 - AluSg1 SINE Alu -14 295 1 4044 223 60 16 chr2 35199094 35199968 -215487886 + MER45B DNA AcHobo 115 1040 0 215 260 0 0 chr2 35199990 35200040 -215487814 + (TA)n Simple_repeat Simple_repeat 1 50 0 21 36 0 0 chr2 35201324 35201352 -215486502 + AT_rich Low_complexity Low_complexity 1 28 0 450 308 184 31 chr2 35201394 35201519 -215486335 + L2 LINE L2 2791 2895 -418 4783 51 2 0 chr2 35201519 35202110 -215485744 + L1PA7 LINE L1 5561 6152 -2 450 308 184 31 chr2 35202110 35202407 -215485447 + L2 LINE L2 2895 3276 -37 258 157 78 0 chr2 35202816 35202867 -215484987 + L2 LINE L2 3191 3245 -68 236 263 40 0 chr2 35202868 35202944 -215484910 + (CATATA)n Simple_repeat Simple_repeat 4 82 0 286 253 182 0 chr2 35203716 35203815 -215484039 + MIR SINE MIR 46 162 -100 523 242 25 10 chr2 35203816 35203954 -215483900 + MLT1A2 LTR MaLR 1 107 -258 * 793 216 10 21 chr2 35203944 35204123 -215483731 + MLT1A2 LTR MaLR 223 370 -4 2361 302 107 21 chr2 35204234 35204444 -215483410 - L2 LINE L2 0 3313 3123 2034 121 16 38 chr2 35204444 35204758 -215483096 - AluSx SINE Alu -5 307 1 2361 302 107 21 chr2 35204758 35205570 -215482284 - L2 LINE L2 -190 3123 2145 884 209 67 24 chr2 35205570 35205780 -215482074 + MER20 DNA MER1_type 1 219 0 2361 302 107 21 chr2 35205780 35206170 -215481684 - L2 LINE L2 -1168 2145 1790 253 293 98 8 chr2 35206425 35206558 -215481296 + LTR16A1 LTR ERVL 92 236 -221 507 309 144 27 chr2 35206639 35206895 -215480959 - MLT1J LTR MaLR -200 311 26 186 347 40 0 chr2 35206923 35206998 -215480856 + L2 LINE L2 3186 3263 -9 244 325 198 6 chr2 35207062 35207219 -215480635 - MIR SINE MIR -64 198 12 1891 179 47 34 chr2 35208275 35208684 -215479170 + MLT2D LTR ERVL 1 414 0 303 334 53 3 chr2 35208872 35209005 -215478849 - MIR SINE MIR -52 156 20 255 31 0 0 chr2 35209816 35209848 -215478006 + (CA)n Simple_repeat Simple_repeat 2 33 0 326 306 106 12 chr2 35210527 35210687 -215477167 + MIR3 SINE MIR 9 183 -25 322 250 105 40 chr2 35210861 35210985 -215476869 + MIR SINE MIR 128 259 -3 779 191 0 0 chr2 35211557 35211693 -215476161 - FRAM SINE Alu -17 159 24 668 324 68 22 chr2 35211702 35211757 -215476097 - L1MC4a LINE L1 -1915 5893 5842 1463 258 94 43 chr2 35211757 35212320 -215475534 + MLT1G1 LTR MaLR 4 595 0 668 324 68 22 chr2 35212320 35212804 -215475050 - L1MC4a LINE L1 -1966 5842 5329 247 263 45 0 chr2 35213055 35213188 -215474666 + (TA)n Simple_repeat Simple_repeat 2 140 0 21 0 0 0 chr2 35213241 35213262 -215474592 + AT_rich Low_complexity Low_complexity 1 21 0 235 229 0 62 chr2 35213423 35213519 -215474335 - L1MC4a LINE L1 -2202 3944 3855 473 333 52 10 chr2 35214164 35214473 -215473381 - HAL1 LINE L1 -773 1734 1413 644 156 94 99 chr2 35215393 35215585 -215472269 - MER45B DNA AcHobo -2 1038 848 1989 213 77 22 chr2 35215684 35216127 -215471727 - MER45B DNA AcHobo -184 856 439 1924 182 40 0 chr2 35216127 35216478 -215471376 - MLT1A1 LTR MaLR 0 365 1 1989 213 77 22 chr2 35216478 35216693 -215471161 - MER45B DNA AcHobo -601 439 237 2217 117 14 25 chr2 35216693 35217052 -215470802 + THE1A LTR MaLR 1 355 0 11860 87 6 2 chr2 35217052 35218626 -215469228 + THE1A-int LTR MaLR 1 1580 0 2310 117 20 6 chr2 35218626 35218976 -215468878 + THE1A LTR MaLR 1 355 0 1989 213 77 22 chr2 35218976 35219068 -215468786 - MER45B DNA AcHobo -802 238 1 393 249 249 0 chr2 35219313 35219486 -215468368 + MIR SINE MIR 47 262 0 24 0 0 0 chr2 35219682 35219706 -215468148 + AT_rich Low_complexity Low_complexity 1 24 0 273 221 0 0 chr2 35219846 35219914 -215467940 + (TA)n Simple_repeat Simple_repeat 1 68 0 1049 171 65 28 chr2 35221332 35221549 -215466305 + AluJo SINE Alu 87 311 -1 392 244 146 0 chr2 35221571 35221694 -215466160 + MIR SINE MIR 51 191 -71 1732 171 68 3 chr2 35221995 35222317 -215465537 - MER2 DNA MER2_type 0 344 2 218 181 24 121 chr2 35222371 35222454 -215465400 - MIR3 SINE MIR -132 76 2 372 138 0 0 chr2 35223543 35223608 -215464246 + (CA)n Simple_repeat Simple_repeat 2 66 0 210 218 177 65 chr2 35223645 35223769 -215464085 - L2 LINE L2 -2 3311 3174 2244 122 0 0 chr2 35223773 35224076 -215463778 + AluJb SINE Alu 1 303 -9 23 54 0 0 chr2 35225369 35225406 -215462448 + AT_rich Low_complexity Low_complexity 1 37 0 2985 209 27 2 chr2 35225649 35226234 -215461620 - MER77 LTR ERV1 -3 602 3 522 349 60 13 chr2 35228555 35228787 -215459067 + MIR SINE MIR 7 249 -13 1547 219 61 73 chr2 35229184 35229756 -215458098 - L1M4 LINE L1 -5354 1188 624 665 258 65 24 chr2 35229999 35230247 -215457607 - L1M4 LINE L1 -6276 266 9 265 389 36 67 chr2 35230532 35231066 -215456788 - L2 LINE L2 0 3272 2758 348 24 0 0 chr2 35231420 35231461 -215456393 + (TC)n Simple_repeat Simple_repeat 2 42 0 344 190 13 0 chr2 35231461 35231540 -215456314 + (TA)n Simple_repeat Simple_repeat 2 81 0 21 0 0 0 chr2 35232218 35232239 -215455615 + AT_rich Low_complexity Low_complexity 1 21 0 184 221 59 59 chr2 35232597 35232665 -215455189 - MIR SINE MIR -50 212 145 369 232 5 187 chr2 35232854 35232973 -215454881 + MER5B DNA MER1_type 17 89 -89 2228 82 0 4 chr2 35232973 35233281 -215454573 - AluSc SINE Alu 0 307 1 369 232 5 187 chr2 35233281 35233358 -215454496 + MER5B DNA MER1_type 89 178 0 194 284 95 14 chr2 35233579 35233653 -215454201 - MIR SINE MIR -109 153 74 512 267 153 20 chr2 35233767 35233917 -215453937 + MER5A DNA MER1_type 14 183 -6 36 0 0 0 chr2 35234198 35234234 -215453620 + AT_rich Low_complexity Low_complexity 1 36 0 618 123 35 0 chr2 35234234 35234405 -215453449 + (TA)n Simple_repeat Simple_repeat 1 177 0 21 0 0 0 chr2 35234405 35234426 -215453428 + AT_rich Low_complexity Low_complexity 1 21 0 248 391 62 6 chr2 35235403 35235582 -215452272 + MIR3 SINE MIR 20 208 0 256 313 26 9 chr2 35235615 35235730 -215452124 - L2 LINE L2 -1044 2270 2154 21 89 0 0 chr2 35236038 35236094 -215451760 + AT_rich Low_complexity Low_complexity 1 56 0 781 170 17 37 chr2 35237802 35237975 -215449879 + MLT1A1 LTR MaLR 199 396 0 2358 82 0 0 chr2 35238000 35238291 -215449563 + AluY SINE Alu 1 291 -20 2108 133 0 3 chr2 35238444 35238752 -215449102 + AluSx SINE Alu 1 307 -5 451 245 0 0 chr2 35238758 35238852 -215449002 + Charlie1 DNA MER1_type 2666 2759 -2 339 270 78 17 chr2 35239195 35239310 -215448544 + L2 LINE L2 3190 3311 -2 510 295 34 29 chr2 35240573 35240780 -215447074 - MIR SINE MIR -6 256 49 930 121 0 61 chr2 35240859 35241024 -215446830 - MER1B DNA MER1_type 0 339 185 729 203 7 0 chr2 35241026 35241169 -215446685 + L1P LINE L1 4513 4656 -1490 3318 211 78 6 chr2 35241289 35242909 -215444945 + L1PBa LINE L1 115 1996 -4867 12040 215 21 13 chr2 35242930 35246152 -215441702 + L1PBa LINE L1 2329 5559 -1303 544 332 57 34 chr2 35246843 35247304 -215440550 + L2 LINE L2 2712 3184 -129 928 205 0 0 chr2 35247326 35247497 -215440357 + MER1B DNA MER1_type 1 171 -126 5017 229 28 20 chr2 35247497 35248345 -215439509 - L1PA15-16 LINE L1 -2427 4422 3582 1790 167 7 0 chr2 35248345 35248668 -215439186 + AluJb SINE Alu 5 329 0 5017 229 28 20 chr2 35248668 35249493 -215438361 - L1PA15-16 LINE L1 -3267 3582 2729 1353 253 72 36 chr2 35249478 35250386 -215437468 - L1ME LINE L1 -370 6292 5346 * 936 247 47 30 chr2 35250405 35250705 -215437149 + L1MCb LINE L1 1 305 -5740 564 178 0 45 chr2 35250706 35250840 -215437014 + L1ME LINE L1 5381 5507 -655 2497 232 77 28 chr2 35250897 35251998 -215435856 + L1MCb LINE L1 338 1483 -4851 432 237 61 15 chr2 35251994 35252125 -215435729 + L1MC2 LINE L1 6181 6317 -27 * 369 306 19 13 chr2 35252189 35252346 -215435508 - L1ME LINE L1 -4640 2185 2028 293 293 71 11 chr2 35252402 35252641 -215435213 - L1ME LINE L1 -4832 1710 1489 269 361 30 6 chr2 35253263 35253432 -215434422 - L1ME LINE L1 -6034 791 619 257 364 83 8 chr2 35253665 35253786 -215434068 - L2 LINE L2 0 3272 3143 226 370 52 32 chr2 35254661 35254815 -215433039 - L2 LINE L2 -4 3268 3112 711 247 18 12 chr2 35254869 35255039 -215432815 - MIR SINE MIR -57 205 35 276 343 12 47 chr2 35255583 35255755 -215432099 - MIR SINE MIR -56 206 41 200 167 0 0 chr2 35255756 35255786 -215432068 + polypyrimidine Low_complexity Low_complexity 2 31 0 286 360 94 23 chr2 35256466 35256946 -215430908 - L2 LINE L2 -809 2505 1992 2116 117 0 0 chr2 35257889 35258203 -215429651 + AluSx SINE Alu 1 314 0 226 208 19 38 chr2 35258580 35258633 -215429221 + L2 LINE L2 3236 3287 -26 315 0 0 0 chr2 35258651 35258686 -215429168 + (TG)n Simple_repeat Simple_repeat 2 36 0 1360 194 51 11 chr2 35259128 35259478 -215428376 + MER69 DNA AcHobo 2161 2524 -2 217 0 29 29 chr2 35259665 35259699 -215428155 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 442 308 31 36 chr2 35259740 35259935 -215427919 + MIR SINE MIR 14 207 -55 2272 145 28 14 chr2 35260069 35260428 -215427426 - THE1B LTR MaLR 0 364 1 2403 66 0 10 chr2 35263155 35263457 -215424397 - AluY SINE Alu -12 299 1 667 288 25 10 chr2 35264133 35264331 -215423523 - MIR SINE MIR -3 259 59 207 0 0 0 chr2 35264590 35264613 -215423241 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 244 47 23 23 chr2 35264882 35264925 -215422929 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1782 169 0 10 chr2 35264935 35265225 -215422629 - AluJo SINE Alu -25 287 1 2760 66 0 8 chr2 35265302 35265665 -215422189 - L1PA13 LINE L1 -19 6144 5785 929 258 73 21 chr2 35265711 35266137 -215421717 - L1M4 LINE L1 -2164 3982 3535 430 262 86 64 chr2 35266287 35266600 -215421254 - L1M4 LINE L1 -2652 3494 3175 372 253 116 47 chr2 35268094 35268284 -215419570 + L2 LINE L2 3109 3311 -2 600 273 44 34 chr2 35268460 35268665 -215419189 - MER63A DNA MER1_type 0 210 4 2180 116 0 0 chr2 35269359 35269652 -215418202 + AluSq SINE Alu 1 293 -20 2078 116 7 0 chr2 35269952 35270236 -215417618 + AluSp SINE Alu 3 288 -25 261 282 129 0 chr2 35270490 35270575 -215417279 + MIR SINE MIR 59 154 -108 614 272 0 0 chr2 35270657 35270793 -215417061 - MIR SINE MIR -88 174 39 251 376 10 0 chr2 35271796 35271897 -215415957 + L1MEd LINE L1 622 723 -5482 409 288 83 72 chr2 35271941 35272474 -215415380 + L1MEd LINE L1 790 1287 -4918 353 274 43 70 chr2 35272490 35272710 -215415144 + L1MEd LINE L1 1300 1524 -4691 180 0 0 0 chr2 35272710 35272730 -215415124 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 453 36 0 0 chr2 35272729 35272784 -215415070 + (CA)n Simple_repeat Simple_repeat 1 55 0 353 274 43 70 chr2 35272730 35272936 -215414918 + L1MEd LINE L1 1524 1662 -4553 247 157 20 0 chr2 35273173 35273224 -215414630 + L1MEd LINE L1 2030 2081 -4315 310 286 12 0 chr2 35273225 35273309 -215414545 + (TA)n Simple_repeat Simple_repeat 2 86 0 477 331 22 7 chr2 35273837 35274106 -215413748 + L1M4 LINE L1 4906 5178 -968 406 324 175 16 chr2 35275063 35275372 -215412482 - L2 LINE L2 0 3313 2956 407 280 198 37 chr2 35275425 35275668 -215412186 - L2 LINE L2 -459 2855 2574 267 218 69 30 chr2 35277140 35277241 -215410613 - L1ME LINE L1 -239 5882 5778 309 340 43 21 chr2 35277261 35277449 -215410405 - MIR SINE MIR -18 244 53 2179 60 0 4 chr2 35277757 35278023 -215409831 - AluY SINE Alu -12 299 35 321 321 36 9 chr2 35278538 35278650 -215409204 - HAL1b LINE L1 -673 675 561 254 95 24 0 chr2 35279014 35279056 -215408798 + (TA)n Simple_repeat Simple_repeat 2 44 0 337 302 39 123 chr2 35279339 35279746 -215408108 - L2 LINE L2 0 3313 2941 6739 56 26 0 chr2 35280115 35281041 -215406813 + L1PA6 LINE L1 5203 6151 -3 2127 120 7 3 chr2 35281283 35281583 -215406271 + AluSx SINE Alu 1 301 -11 1148 153 31 0 chr2 35281639 35281835 -215406019 - Tigger3b DNA MER2_type -751 480 279 2425 133 77 12 chr2 35281840 35282245 -215405609 + MSTB1 LTR MaLR 2 432 0 1437 181 25 25 chr2 35282247 35282529 -215405325 - Tigger3b DNA MER2_type -949 282 1 706 224 58 5 chr2 35282529 35282734 -215405120 - L1ME2 LINE L1 -262 5902 5687 196 241 19 74 chr2 35283769 35283823 -215404031 + L2 LINE L2 3189 3239 -74 2037 156 47 3 chr2 35283833 35284198 -215403656 - L1PB4 LINE L1 -12 6144 5764 189 74 0 0 chr2 35284753 35284780 -215403074 + (TGGA)n Simple_repeat Simple_repeat 2 28 0 444 324 59 13 chr2 35286280 35286518 -215401336 + HERV16 LTR ERVL 1106 1354 -3642 532 341 75 42 chr2 35286537 35287138 -215400716 + HERV16 LTR ERVL 1481 2101 -3553 288 310 177 0 chr2 35287241 35287399 -215400455 + LTR16A1 LTR ERVL 266 451 -6 207 0 0 0 chr2 35288249 35288272 -215399582 + (TG)n Simple_repeat Simple_repeat 1 23 0 241 254 14 14 chr2 35288272 35288336 -215399518 + GA-rich Low_complexity Low_complexity 6 72 0 696 284 121 26 chr2 35288768 35289081 -215398773 + MLT1J LTR MaLR 3 345 -166 5101 24 2 2 chr2 35289098 35289723 -215398131 - L1PA3 LINE L1 -752 5394 4770 6316 27 21 0 chr2 35289723 35290461 -215397393 + L1PA3 LINE L1 5397 6155 0 2140 111 3 10 chr2 35290868 35291166 -215396688 - AluSq SINE Alu -17 296 1 23 0 0 0 chr2 35291284 35291307 -215396547 + AT_rich Low_complexity Low_complexity 1 23 0 239 340 0 11 chr2 35291709 35291803 -215396051 + A-rich Low_complexity Low_complexity 4 96 0 269 151 19 0 chr2 35292553 35292606 -215395248 + (TG)n Simple_repeat Simple_repeat 2 55 0 491 317 56 6 chr2 35292832 35293012 -215394842 - MIR SINE MIR -51 211 23 792 184 87 94 chr2 35293013 35293353 -215394501 + L1MC3 LINE L1 6762 7103 -682 240 246 0 0 chr2 35293353 35293410 -215394444 + MLT1F1 LTR MaLR 35 91 -476 2389 83 0 10 chr2 35293410 35293722 -215394132 + AluSc SINE Alu 1 309 0 792 184 87 94 chr2 35293722 35294218 -215393636 + L1MC3 LINE L1 7101 7776 -9 1858 108 0 8 chr2 35294667 35294926 -215392928 - AluSq SINE Alu 0 313 57 184 290 10 80 chr2 35295462 35295562 -215392292 + MIR SINE MIR 120 212 -50 3190 177 38 11 chr2 35295653 35296280 -215391574 + LTR48B LTR ERV1 1 644 0 223 304 43 54 chr2 35298609 35298701 -215389153 + L2 LINE L2 3196 3286 -27 2440 82 0 0 chr2 35299157 35299462 -215388392 - AluY SINE Alu -6 305 1 204 40 0 0 chr2 35300057 35300082 -215387772 + (TG)n Simple_repeat Simple_repeat 2 26 0 24 0 0 0 chr2 35300731 35300755 -215387099 + AT_rich Low_complexity Low_complexity 1 24 0 2472 77 0 10 chr2 35300866 35301178 -215386676 - AluSc SINE Alu 0 309 1 1824 76 4 12 chr2 35302603 35302853 -215385001 + L1PA7 LINE L1 5906 6153 -1 198 0 0 0 chr2 35303040 35303062 -215384792 + (T)n Simple_repeat Simple_repeat 1 22 0 196 333 26 87 chr2 35303871 35304066 -215383788 - MIR3 SINE MIR -10 198 16 291 300 28 9 chr2 35304775 35304901 -215382953 + CT-rich Low_complexity Low_complexity 2 220 0 466 318 94 79 chr2 35304943 35305346 -215382508 + L2 LINE L2 1937 2332 -982 531 178 54 23 chr2 35305346 35305475 -215382379 + MER94 DNA DNA 2 134 0 466 318 94 79 chr2 35305475 35305897 -215381957 + L2 LINE L2 2332 2775 -539 25 31 0 0 chr2 35306075 35306107 -215381747 + AT_rich Low_complexity Low_complexity 1 32 0 230 234 47 16 chr2 35306896 35306960 -215380894 + MIR SINE MIR 20 85 -177 258 180 0 0 chr2 35307785 35307846 -215380008 + (TG)n Simple_repeat Simple_repeat 1 61 0 729 301 106 43 chr2 35308726 35309578 -215378276 + L2 LINE L2 2358 3275 -38 359 298 116 9 chr2 35311052 35311191 -215376663 - MIR SINE MIR -74 188 37 2386 69 3 7 chr2 35311591 35311897 -215375957 - AluY SINE Alu -6 305 1 327 266 0 0 chr2 35311978 35312091 -215375763 + (TG)n Simple_repeat Simple_repeat 1 113 0 407 304 0 0 chr2 35312802 35312894 -215374960 + MIR SINE MIR 1 92 -170 402 311 8 0 chr2 35313346 35313465 -215374389 + MER5A DNA MER1_type 4 123 -66 260 246 0 0 chr2 35313557 35313614 -215374240 + Charlie7 DNA MER1_type 38 94 -2518 270 85 51 17 chr2 35313700 35313759 -215374095 + (CATA)n Simple_repeat Simple_repeat 2 62 0 5112 89 18 5 chr2 35313772 35314514 -215373340 + L1MA1 LINE L1 5548 6298 -4 26 0 0 0 chr2 35314514 35314540 -215373314 + AT_rich Low_complexity Low_complexity 1 26 0 398 210 65 0 chr2 35315507 35315631 -215372223 + L1ME2 LINE L1 4453 4584 -1562 1874 184 35 11 chr2 35315998 35316374 -215371480 - MLT1B LTR MaLR 0 390 6 993 243 15 26 chr2 35316461 35316733 -215371121 + MLT1C LTR MaLR 15 283 -184 756 254 137 19 chr2 35316734 35317100 -215370754 + L1ME2 LINE L1 4688 5096 -1050 2239 233 61 48 chr2 35317108 35317897 -215369957 + L1ME2 LINE L1 5348 6146 -18 1226 165 65 4 chr2 35317932 35318162 -215369692 + L1MB5 LINE L1 464 707 -6782 2206 109 0 0 chr2 35318576 35318870 -215368984 + AluSc SINE Alu 1 294 -15 22 0 0 0 chr2 35319241 35319263 -215368591 + AT_rich Low_complexity Low_complexity 1 22 0 1261 205 54 37 chr2 35320550 35321120 -215366734 + L1MB5 LINE L1 3362 3941 -3624 * 4001 194 30 21 chr2 35321117 35321349 -215366505 + L1MB5 LINE L1 6427 6655 -938 1776 155 43 25 chr2 35321349 35321717 -215366137 - THE1C LTR MaLR 0 375 1 4001 194 30 21 chr2 35321717 35322587 -215365267 + L1MB5 LINE L1 6655 7542 -51 1414 275 78 5 chr2 35322759 35323185 -215364669 + LTR16B LTR ERVL 8 464 0 21 0 0 0 chr2 35324578 35324599 -215363255 + AT_rich Low_complexity Low_complexity 1 21 0 233 0 0 59 chr2 35326959 35326993 -215360861 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1179 142 0 17 chr2 35327024 35327200 -215360654 - AluSx SINE Alu -139 173 1 358 290 174 14 chr2 35327229 35327367 -215360487 - MER5A DNA MER1_type -20 169 10 830 167 93 7 chr2 35327400 35327550 -215360304 + MER46A DNA MER2_type 1 163 -73 322 333 0 37 chr2 35327554 35327689 -215360165 + MER5B DNA MER1_type 33 162 -16 248 313 90 22 chr2 35327800 35327934 -215359920 + MIR SINE MIR 72 214 -48 210 294 81 81 chr2 35327978 35328114 -215359740 + L2 LINE L2 3161 3296 -17 2051 112 44 0 chr2 35328138 35328434 -215359420 - AluSq SINE Alu -4 309 1 233 351 126 9 chr2 35329218 35329329 -215358525 + L2 LINE L2 3189 3312 -1 237 33 0 0 chr2 35329483 35329513 -215358341 + (TG)n Simple_repeat Simple_repeat 2 31 0 456 293 98 18 chr2 35329962 35330126 -215357728 - MIR3 SINE MIR -2 206 30 1939 102 0 8 chr2 35330575 35330839 -215357015 + AluSq SINE Alu 39 300 -13 346 320 202 15 chr2 35330867 35331070 -215356784 - MIR SINE MIR -18 244 4 334 332 114 0 chr2 35331270 35331463 -215356391 + MIR SINE MIR 47 261 -1 2330 104 0 0 chr2 35331552 35331860 -215355994 - AluSx SINE Alu -4 308 1 208 352 36 73 chr2 35332221 35332440 -215355414 + L2 LINE L2 2539 2749 -565 694 24 0 0 chr2 35332449 35332533 -215355321 + L1MA2 LINE L1 6213 6296 -8 1922 126 13 13 chr2 35332607 35332916 -215354938 - AluSx SINE Alu 0 312 4 375 23 0 0 chr2 35333060 35333104 -215354750 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 2335 57 0 0 chr2 35333105 35333453 -215354401 - AluY SINE Alu 0 348 1 711 264 26 79 chr2 35333580 35333845 -215354009 - MIR SINE MIR -5 257 7 288 339 153 8 chr2 35333918 35334042 -215353812 + L2 LINE L2 3127 3268 -4 387 306 45 65 chr2 35334919 35335118 -215352736 - L3 LINE CR1 -1 1576 1382 212 268 0 0 chr2 35335772 35335813 -215352041 - L2 LINE L2 -8 3264 3224 589 290 30 45 chr2 35336001 35336201 -215351653 - MIR SINE MIR -7 255 59 354 203 27 0 chr2 35338103 35338177 -215349677 + MIR SINE MIR 112 187 -75 2210 120 0 0 chr2 35338425 35338724 -215349130 - AluSx SINE Alu -13 299 1 351 241 0 36 chr2 35338958 35339070 -215348784 + (TATATG)n Simple_repeat Simple_repeat 4 111 0 882 244 64 38 chr2 35339070 35339129 -215348725 - L1ME3 LINE L1 -26 6144 6088 237 65 0 0 chr2 35339129 35339160 -215348694 + (CA)n Simple_repeat Simple_repeat 1 31 0 882 244 64 38 chr2 35339160 35339437 -215348417 - L1ME3 LINE L1 -82 6088 5793 199 256 51 51 chr2 35339747 35339825 -215348029 + L2 LINE L2 3227 3304 -9 23 78 0 0 chr2 35340357 35340408 -215347446 + AT_rich Low_complexity Low_complexity 1 51 0 1424 234 84 42 chr2 35343944 35344506 -215343348 + LTR24B LTR ERV1 1 635 0 513 325 38 19 chr2 35345095 35345304 -215342550 - MIR SINE MIR -32 230 18 336 241 234 19 chr2 35348456 35348614 -215339240 - MIR SINE MIR -10 252 61 1592 299 143 21 chr2 35349557 35350462 -215337392 - HAL1 LINE L1 -1482 1025 11 750 262 159 56 chr2 35351016 35351532 -215336322 - MLT1G LTR MaLR -2 588 20 399 21 0 0 chr2 35351548 35351596 -215336258 + (CA)n Simple_repeat Simple_repeat 1 48 0 2155 104 0 3 chr2 35351664 35351962 -215335892 + AluSq SINE Alu 1 297 -16 186 333 105 9 chr2 35352384 35352489 -215335365 + MIR SINE MIR 77 191 -71 319 349 107 6 chr2 35353364 35353533 -215334321 + MIR SINE MIR 49 234 -28 641 92 10 0 chr2 35353574 35353672 -215334182 + (TCCC)n Simple_repeat Simple_repeat 1 99 0 189 171 0 0 chr2 35353675 35353710 -215334144 + CT-rich Low_complexity Low_complexity 3 37 0 441 218 87 91 chr2 35353735 35354010 -215333844 - L1MC5 LINE L1 -181 7780 7507 435 163 0 23 chr2 35354006 35354092 -215333762 - L1MD3 LINE L1 0 7995 7912 * 331 303 34 83 chr2 35354092 35354560 -215333294 + MER65A LTR ERV1 1 445 0 742 196 112 0 chr2 35354562 35354741 -215333113 - L1MD3 LINE L1 -82 7913 7715 565 220 70 59 chr2 35354861 35355134 -215332720 - L1MC5 LINE L1 -593 7368 7093 4490 170 32 22 chr2 35355284 35356162 -215331692 - L1MC2 LINE L1 -30 6314 5428 853 211 0 0 chr2 35356182 35356324 -215331530 - AluSg/x SINE Alu -37 273 132 1918 157 3 0 chr2 35356324 35356629 -215331225 - AluSx SINE Alu -6 306 1 1658 179 40 19 chr2 35356629 35357151 -215330703 - L1MC2 LINE L1 -743 5403 4914 1008 204 52 69 chr2 35357151 35357560 -215330294 + MLT1A1 LTR MaLR 1 363 -2 701 188 0 7 chr2 35357562 35357706 -215330148 - L1MC2 LINE L1 -1228 4918 4776 184 310 42 111 chr2 35357737 35357963 -215329891 + L3 LINE CR1 1050 1247 -330 2316 100 0 0 chr2 35357963 35358253 -215329601 + AluSx SINE Alu 1 290 -22 184 310 42 111 chr2 35358253 35358358 -215329496 + L3 LINE CR1 1247 1358 -219 2165 133 0 3 chr2 35358504 35358813 -215329041 + AluSx SINE Alu 3 310 -2 21 57 0 0 chr2 35360846 35360881 -215326973 + AT_rich Low_complexity Low_complexity 1 35 0 981 197 90 97 chr2 35362944 35363241 -215324613 + MER110A LTR ERV1 71 369 -99 2224 86 0 0 chr2 35363241 35363519 -215324335 + AluY SINE Alu 1 278 -33 369 0 0 0 chr2 35363519 35363560 -215324294 + (CAA)n Simple_repeat Simple_repeat 2 42 0 981 197 90 97 chr2 35363560 35363662 -215324192 + MER110A LTR ERV1 367 468 0 490 366 20 16 chr2 35364191 35364437 -215323417 + MIR SINE MIR 13 259 -3 208 339 117 44 chr2 35365159 35365339 -215322515 - MIR3 SINE MIR 0 208 16 434 281 55 70 chr2 35366024 35366280 -215321574 - L2 LINE L2 -655 2659 2408 605 324 39 26 chr2 35366448 35366757 -215321097 - L2 LINE L2 -1305 2009 1697 270 56 0 0 chr2 35367629 35367665 -215320189 + (CAA)n Simple_repeat Simple_repeat 1 36 0 619 328 43 21 chr2 35367848 35368174 -215319680 - L2 LINE L2 -1637 1677 1345 458 234 7 97 chr2 35368489 35368643 -215319211 - L2 LINE L2 -1 3312 3173 448 289 114 6 chr2 35368956 35369122 -215318732 - MIR SINE MIR -16 246 63 1994 113 6 3 chr2 35369414 35369725 -215318129 + AluSx SINE Alu 1 312 0 2277 102 0 6 chr2 35369809 35370123 -215317731 + AluSx SINE Alu 1 312 0 182 36 0 36 chr2 35370134 35370162 -215317692 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 642 284 115 82 chr2 35370461 35370628 -215317226 + L2 LINE L2 2590 2750 -563 2082 93 11 0 chr2 35370628 35370932 -215316922 + AluSp SINE Alu 1 307 0 642 284 115 82 chr2 35370932 35371440 -215316414 + L2 LINE L2 2750 3310 -3 21 0 0 0 chr2 35372382 35372403 -215315451 + AT_rich Low_complexity Low_complexity 1 21 0 588 317 65 40 chr2 35373030 35373459 -215314395 + L1MDa LINE L1 1036 1543 -4883 21 57 0 0 chr2 35373807 35373842 -215314012 + AT_rich Low_complexity Low_complexity 1 35 0 245 155 17 0 chr2 35374930 35374988 -215312866 + CT-rich Low_complexity Low_complexity 4 62 0 215 307 79 47 chr2 35375953 35376080 -215311774 + L2 LINE L2 2927 3057 -215 1109 255 82 51 chr2 35376325 35376851 -215311003 - L2 LINE L2 -1 3312 2756 2243 71 30 7 chr2 35376851 35377148 -215310706 - AluY SINE Alu -7 304 1 1109 255 82 51 chr2 35377148 35377203 -215310651 - L2 LINE L2 -557 2756 2704 232 364 36 7 chr2 35378503 35378643 -215309211 - MIR SINE MIR -116 146 3 180 298 48 0 chr2 35378974 35379058 -215308796 + L3 LINE CR1 634 721 -856 180 0 0 0 chr2 35379061 35379081 -215308773 + (TG)n Simple_repeat Simple_repeat 2 21 0 226 309 231 34 chr2 35379744 35380038 -215307816 + L3 LINE CR1 1094 1445 -132 26 50 0 0 chr2 35380980 35381020 -215306834 + AT_rich Low_complexity Low_complexity 1 40 0 27 29 0 0 chr2 35382460 35382494 -215305360 + AT_rich Low_complexity Low_complexity 1 34 0 637 50 0 0 chr2 35384056 35384136 -215303718 + MADE1 DNA Mariner 1 80 0 22 70 0 0 chr2 35384594 35384637 -215303217 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 35384722 35384745 -215303109 + AT_rich Low_complexity Low_complexity 1 23 0 386 68 108 40 chr2 35385086 35385160 -215302694 + MADE1 DNA Mariner 2 80 0 662 273 63 10 chr2 35385698 35385815 -215302039 - MER58A DNA MER1_type -2196 224 90 2435 76 0 0 chr2 35385815 35386118 -215301736 + AluY SINE Alu 1 303 -8 662 273 63 10 chr2 35386118 35386205 -215301649 - MER58A DNA MER1_type -2330 90 9 2056 117 0 0 chr2 35386888 35387170 -215300684 + AluSc SINE Alu 1 282 -27 180 0 0 0 chr2 35387173 35387193 -215300661 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 366 221 13 0 chr2 35387570 35387647 -215300207 + AluSg/x SINE Alu 197 274 -26 25 51 0 0 chr2 35387647 35387686 -215300168 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 35388341 35388371 -215299483 + AT_rich Low_complexity Low_complexity 1 30 0 184 288 61 0 chr2 35389054 35389120 -215298734 - L2 LINE L2 -649 2665 2596 743 172 0 8 chr2 35390865 35390999 -215296855 + FLAM_C SINE Alu 1 133 0 21 36 0 0 chr2 35391522 35391550 -215296304 + AT_rich Low_complexity Low_complexity 1 28 0 200 217 87 0 chr2 35391553 35391599 -215296255 - L2 LINE L2 -8 3305 3256 2442 30 40 3 chr2 35392777 35393076 -215294778 - AluY SINE Alu 0 311 2 270 0 0 0 chr2 35393210 35393240 -215294614 + (TG)n Simple_repeat Simple_repeat 2 31 0 1298 177 0 0 chr2 35393516 35393725 -215294129 + AluJo SINE Alu 87 295 -17 222 203 51 0 chr2 35393780 35393839 -215294015 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 21 57 0 0 chr2 35394412 35394447 -215293407 + AT_rich Low_complexity Low_complexity 1 35 0 558 191 8 23 chr2 35395739 35395870 -215291984 + L1PA15 LINE L1 6035 6163 -2 26 0 0 0 chr2 35396089 35396115 -215291739 + AT_rich Low_complexity Low_complexity 1 26 0 302 98 20 0 chr2 35396350 35396401 -215291453 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 24 53 0 0 chr2 35397629 35397667 -215290187 + AT_rich Low_complexity Low_complexity 1 38 0 1985 248 96 2 chr2 35398041 35398719 -215289135 + Charlie1 DNA MER1_type 5 2051 -710 293 214 0 22 chr2 35398729 35398818 -215289036 + GA-rich Low_complexity Low_complexity 4 90 0 317 254 15 0 chr2 35398821 35398888 -215288966 + MER21B LTR ERV1 26 93 -770 1828 226 139 62 chr2 35398907 35398959 -215288895 + MER21B LTR ERV1 19 66 -797 2679 14 0 0 chr2 35398959 35399253 -215288601 - AluY SINE Alu -17 294 1 1828 226 139 62 chr2 35399253 35399936 -215287918 + MER21B LTR ERV1 66 810 -53 1567 234 29 83 chr2 35400003 35400469 -215287385 + MER77 LTR ERV1 1 390 -172 2878 191 49 12 chr2 35400483 35401154 -215286700 + Charlie1 DNA MER1_type 2066 2761 0 234 0 0 0 chr2 35401814 35401840 -215286014 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 652 175 31 81 chr2 35402185 35402345 -215285509 - MER4D LTR ERV1 -717 155 4 1113 160 17 25 chr2 35402378 35402577 -215285277 - MER66-int LTR ERV1 -1062 7058 4350 301 179 224 0 chr2 35402551 35402618 -215285236 - MER66-int LTR ERV1 -4088 4032 3951 * 730 158 17 107 chr2 35402798 35402975 -215284879 - MER66-int LTR ERV1 -4174 3946 3786 353 260 63 8 chr2 35403112 35403239 -215284615 - MER66-int LTR ERV1 -2151 4180 4047 2059 181 63 94 chr2 35403240 35404637 -215283217 - MER66-int LTR ERV1 -2512 4164 1210 2425 177 15 9 chr2 35404640 35405103 -215282751 - MER66-int LTR ERV1 -220 1566 1101 671 260 11 88 chr2 35405288 35405573 -215282281 - MER66-int LTR ERV1 -3521 3155 2893 637 189 6 111 chr2 35405788 35405968 -215281886 - MER66-int LTR ERV1 -5760 916 756 1821 209 17 52 chr2 35406505 35406964 -215280890 - MER41B LTR ERV1 -36 599 157 253 136 23 34 chr2 35407278 35407366 -215280488 + (TA)n Simple_repeat Simple_repeat 2 88 0 24 32 0 0 chr2 35408138 35408169 -215279685 + AT_rich Low_complexity Low_complexity 1 31 0 1888 155 0 16 chr2 35408402 35408719 -215279135 - AluSx SINE Alu 0 312 1 839 188 0 0 chr2 35409511 35409649 -215278205 + FLAM_C SINE Alu 1 138 -5 418 237 0 59 chr2 35410020 35410138 -215277716 + L2 LINE L2 3203 3313 0 200 322 11 35 chr2 35410464 35410551 -215277303 - L2 LINE L2 -188 3084 3000 267 67 67 22 chr2 35411407 35411452 -215276402 - L1PA8A LINE L1 -494 5637 5591 468 262 61 65 chr2 35412046 35412325 -215275529 - LTR16B LTR ERVL 0 464 187 210 154 0 0 chr2 35412375 35412414 -215275440 + T-rich Low_complexity Low_complexity 2 40 0 1589 149 4 20 chr2 35412414 35412518 -215275336 - AluSq SINE Alu -62 251 147 5488 67 105 4 chr2 35412518 35413268 -215274586 + LTR12 LTR ERV1 1 826 0 1589 149 4 20 chr2 35413268 35413412 -215274442 - AluSq SINE Alu -166 147 7 268 290 28 80 chr2 35413426 35413602 -215274252 - HERV16 LTR ERVL -1273 3723 3557 639 278 53 60 chr2 35413715 35413996 -215273858 - HERV16 LTR ERVL -2964 2032 1754 297 167 0 0 chr2 35414055 35414109 -215273745 + CT-rich Low_complexity Low_complexity 1 54 0 378 91 0 0 chr2 35414253 35414308 -215273546 - MLT2A2 LTR ERVL 0 453 399 27 49 0 0 chr2 35414315 35414356 -215273498 + AT_rich Low_complexity Low_complexity 1 41 0 3113 84 5 8 chr2 35414362 35414783 -215273071 - MLT2A1 LTR ERVL -34 486 1 1963 335 56 47 chr2 35414786 35416204 -215271650 - HERV16 LTR ERVL -3563 1433 3 818 264 94 37 chr2 35416206 35416641 -215271213 - LTR16B LTR ERVL 0 464 5 2265 79 0 4 chr2 35416715 35417028 -215270826 + AluY SINE Alu 5 316 0 294 189 0 40 chr2 35417271 35417345 -215270509 + MER103 DNA DNA 36 106 -60 189 0 0 0 chr2 35418794 35418815 -215269039 + (T)n Simple_repeat Simple_repeat 1 21 0 905 231 24 48 chr2 35419284 35419535 -215268319 - L1MC4 LINE L1 -1126 6916 6672 227 188 0 31 chr2 35419569 35419633 -215268221 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 1952 140 0 7 chr2 35420367 35420697 -215267157 - AluSx SINE Alu 0 328 1 272 279 26 32 chr2 35421403 35421593 -215266261 - L2 LINE L2 -2656 658 470 2115 113 3 0 chr2 35422411 35422695 -215265159 + AluSq SINE Alu 1 285 -28 24 32 0 0 chr2 35422695 35422726 -215265128 + AT_rich Low_complexity Low_complexity 1 31 0 647 134 75 118 chr2 35423523 35423572 -215264282 - MER53 DNA DNA -9 180 130 477 68 11 114 chr2 35423572 35423624 -215264230 - MADE1 DNA Mariner 0 80 39 1916 83 19 23 chr2 35423624 35423888 -215263966 + AluSc SINE Alu 37 299 -10 477 68 11 114 chr2 35423888 35423923 -215263931 - MADE1 DNA Mariner -41 39 2 647 134 75 118 chr2 35423923 35424059 -215263795 - MER53 DNA DNA -59 130 3 23 0 0 0 chr2 35424337 35424360 -215263494 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 35424456 35424484 -215263370 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr2 35424597 35424623 -215263231 + AT_rich Low_complexity Low_complexity 1 26 0 423 386 13 4 chr2 35424868 35425104 -215262750 + L1MC/D LINE L1 5497 5734 -2074 31 44 0 0 chr2 35425218 35425263 -215262591 + AT_rich Low_complexity Low_complexity 1 45 0 613 281 101 10 chr2 35426315 35426514 -215261340 - MIR SINE MIR 0 262 46 251 218 109 0 chr2 35427412 35427467 -215260387 - L2 LINE L2 -3 3310 3250 2133 190 77 17 chr2 35427503 35427971 -215259883 + MER67D LTR ERV1 11 506 -8 184 244 0 0 chr2 35428979 35429020 -215258834 - MIR SINE MIR -176 86 46 825 187 107 8 chr2 35429229 35429491 -215258363 - L1MA2 LINE L1 -49 6255 5968 2414 68 7 7 chr2 35429896 35430203 -215257651 + AluY SINE Alu 5 311 0 207 0 0 0 chr2 35433267 35433290 -215254564 + (TTG)n Simple_repeat Simple_repeat 2 24 0 207 0 0 0 chr2 35433289 35433312 -215254542 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 952 90 0 0 chr2 35433312 35433434 -215254420 - AluSc SINE Alu -32 277 156 27 62 0 0 chr2 35433543 35433591 -215254263 + AT_rich Low_complexity Low_complexity 1 48 0 43328 45 2 4 chr2 35433591 35439752 -215248102 - L1PA4 LINE L1 -3 6152 1 495 228 45 119 chr2 35440358 35440626 -215247228 - MER112 DNA MER1_type -12 248 1 415 191 0 19 chr2 35440961 35441066 -215246788 + (CA)n Simple_repeat Simple_repeat 2 104 0 329 268 62 21 chr2 35443393 35443490 -215244364 + MIR SINE MIR 6 106 -156 7455 187 44 17 chr2 35444317 35446980 -215240874 - L1MA8 LINE L1 -22 7688 4940 269 161 18 0 chr2 35446993 35447049 -215240805 - L1MA8 LINE L1 -4930 2635 2579 247 208 21 0 chr2 35447095 35447143 -215240711 - L1MA8 LINE L1 -6981 508 460 2138 124 0 0 chr2 35447265 35447556 -215240298 + AluY SINE Alu 1 291 -20 500 248 29 15 chr2 35447638 35447775 -215240079 - MLT1G1 LTR MaLR -7 588 450 386 321 14 29 chr2 35447779 35447919 -215239935 - MLT1G1 LTR MaLR -276 319 182 273 319 80 0 chr2 35448045 35448158 -215239696 - MLT1G1 LTR MaLR -473 122 1 23 0 0 0 chr2 35449012 35449035 -215238819 + AT_rich Low_complexity Low_complexity 1 23 0 1427 215 18 0 chr2 35449127 35449457 -215238397 - L1MB7 LINE L1 -13 6171 5836 307 299 103 0 chr2 35449833 35449920 -215237934 - L1M4 LINE L1 -1922 4224 4129 454 330 87 54 chr2 35450040 35450373 -215237481 - L1M4 LINE L1 -2005 4141 3798 2120 124 3 0 chr2 35450647 35450938 -215236916 - AluSx SINE Alu -20 292 1 449 255 57 13 chr2 35450980 35451137 -215236717 - MIR SINE MIR -1 261 98 229 374 45 32 chr2 35451300 35451455 -215236399 + MIR3 SINE MIR 48 204 -4 459 337 49 0 chr2 35451648 35451811 -215236043 + MER117 DNA MER1_type 25 195 -2 1404 193 57 33 chr2 35453098 35453443 -215234411 - MLT1A1 LTR MaLR -13 352 1 1653 263 49 30 chr2 35453684 35454193 -215233661 - LTR40a LTR ERVL 0 519 1 189 352 0 0 chr2 35454309 35454363 -215233491 + MIR SINE MIR 207 260 -2 402 319 176 9 chr2 35455001 35455217 -215232637 + MIR SINE MIR 11 262 0 207 0 0 0 chr2 35458361 35458384 -215229470 + (TA)n Simple_repeat Simple_repeat 2 24 0 342 292 29 22 chr2 35458854 35458991 -215228863 - L1MC4 LINE L1 -549 7493 7356 451 108 96 0 chr2 35459138 35459221 -215228633 - L1PA12 LINE L1 0 6168 6078 310 350 11 11 chr2 35459279 35459456 -215228398 - HAL1b LINE L1 -916 432 256 2384 73 0 0 chr2 35459534 35459839 -215228015 - AluY SINE Alu 0 305 1 3656 101 12 2 chr2 35459990 35460503 -215227351 - L1PA13 LINE L1 -23 6140 5623 566 241 204 34 chr2 35461685 35462038 -215225816 - L1ME4a LINE L1 -52 6069 5657 844 321 68 55 chr2 35462324 35462929 -215224925 + L2 LINE L2 2171 2783 -531 1000 236 11 18 chr2 35462929 35463205 -215224649 - L1M4 LINE L1 -2455 3691 3418 558 254 107 36 chr2 35463205 35463457 -215224397 + MER76 LTR ERV 282 551 -137 6035 143 35 35 chr2 35463620 35464396 -215223458 + L1M1 LINE L1 1709 2483 -5082 2367 80 6 6 chr2 35464396 35464707 -215223147 + AluY SINE Alu 1 311 0 6035 143 35 35 chr2 35464707 35465535 -215222319 + L1M1 LINE L1 2483 3309 -4256 * 6745 189 10 18 chr2 35465530 35465602 -215222252 + L1M1 LINE L1 4373 4444 -3121 2027 129 93 12 chr2 35465602 35465934 -215221920 + THE1B LTR MaLR 5 363 -1 6745 189 10 18 chr2 35465934 35467335 -215220519 + L1M1 LINE L1 4444 5835 -1730 2810 111 9 11 chr2 35467336 35467769 -215220085 + L1MA2 LINE L1 5847 6278 -26 607 221 14 29 chr2 35468139 35468279 -215219575 + AluJo SINE Alu 2 139 -173 836 209 63 19 chr2 35468502 35468666 -215219188 - MER34 LTR ERV1 -3 539 363 2298 99 7 0 chr2 35468666 35468970 -215218884 - AluSc SINE Alu -3 306 1 836 209 63 19 chr2 35468970 35469011 -215218843 - MER34 LTR ERV1 -179 363 325 212 314 119 62 chr2 35469104 35469330 -215218524 + L2 LINE L2 977 1215 -2099 418 281 0 23 chr2 35469416 35469544 -215218310 + MER117 DNA MER1_type 33 157 -40 242 345 94 60 chr2 35470003 35470396 -215217458 + L2 LINE L2 1861 2272 -1042 2311 178 54 13 chr2 35470396 35470862 -215216992 - MER66B LTR ERV1 0 486 2 242 345 94 60 chr2 35470862 35470905 -215216949 + L2 LINE L2 2272 2312 -1002 406 244 0 0 chr2 35471031 35471121 -215216733 - MER66B LTR ERV1 -395 91 2 1057 126 88 0 chr2 35471787 35471946 -215215908 - AluSx SINE Alu -139 173 1 2191 106 3 0 chr2 35472032 35472325 -215215529 - AluSx SINE Alu -18 294 1 423 306 111 78 chr2 35473043 35473504 -215214350 + L2 LINE L2 2838 3313 0 2243 66 35 3 chr2 35473693 35473982 -215213872 - AluY SINE Alu -13 298 1 1953 142 7 0 chr2 35475949 35476230 -215211624 + AluSx SINE Alu 5 287 -25 603 273 52 30 chr2 35476291 35476558 -215211296 + L1ME LINE L1 5522 5794 -327 363 231 43 9 chr2 35477087 35477199 -215210655 + MLT1I LTR MaLR 311 409 0 295 314 51 58 chr2 35477208 35477364 -215210490 + MIR SINE MIR 72 226 -36 23 0 0 0 chr2 35477511 35477534 -215210320 + AT_rich Low_complexity Low_complexity 1 23 0 4354 16 0 0 chr2 35479839 35480337 -215207517 - L1PA2 LINE L1 -1 6154 5657 3328 13 10 3 chr2 35480337 35480728 -215207126 + L1PA2 LINE L1 5275 5668 -487 347 257 76 0 chr2 35481421 35481526 -215206328 - MIR3 SINE MIR -11 197 85 2050 138 0 10 chr2 35481657 35481955 -215205899 - AluSx SINE Alu -17 295 1 205 382 0 0 chr2 35482052 35482120 -215205734 + L2 LINE L2 3202 3269 -3 4090 225 64 48 chr2 35483297 35483818 -215204036 + L1MB7 LINE L1 3833 4344 -1840 1719 188 14 0 chr2 35483818 35484106 -215203748 + AluJo SINE Alu 1 292 -20 4090 225 64 48 chr2 35484106 35484904 -215202950 + L1MB7 LINE L1 4344 5128 -1056 1556 186 6 40 chr2 35484904 35485227 -215202627 + AluJo SINE Alu 1 312 0 4090 225 64 48 chr2 35485227 35486218 -215201636 + L1MB7 LINE L1 5128 6169 -15 223 269 138 35 chr2 35486242 35486387 -215201467 + MIR SINE MIR 57 216 -46 451 281 127 70 chr2 35486469 35487031 -215200823 - L2 LINE L2 -8 3305 2710 265 358 193 21 chr2 35487031 35487411 -215200443 - L2 LINE L2 -1176 2138 1825 2296 89 0 13 chr2 35487411 35487714 -215200140 - AluY SINE Alu -12 299 1 265 358 193 21 chr2 35487714 35488424 -215199430 - L2 LINE L2 -1489 1825 860 2291 76 7 26 chr2 35488492 35488795 -215199059 - AluSx SINE Alu -11 301 5 387 298 107 29 chr2 35489172 35489414 -215198440 - MIR SINE MIR -1 261 1 275 170 0 0 chr2 35490737 35490784 -215197070 + L1ME1 LINE L1 3943 3989 -2157 5732 142 10 14 chr2 35490810 35491367 -215196487 - L1PB3 LINE L1 -16 6138 5580 2121 127 7 0 chr2 35491367 35491674 -215196180 + AluSg SINE Alu 1 309 -1 5732 142 10 14 chr2 35491674 35492350 -215195504 - L1PB3 LINE L1 -574 5580 4910 3444 252 41 48 chr2 35492369 35493985 -215193869 + L1ME1 LINE L1 3975 5565 -601 6347 107 23 51 chr2 35494029 35495265 -215192589 - L1MA3 LINE L1 0 6305 5101 1516 211 112 24 chr2 35495284 35495740 -215192114 + L1ME1 LINE L1 5588 6083 -81 28 61 0 0 chr2 35495765 35495814 -215192040 + AT_rich Low_complexity Low_complexity 1 49 0 278 360 35 9 chr2 35496728 35496842 -215191012 - L3 LINE CR1 -82 1495 1379 289 346 109 0 chr2 35496852 35497054 -215190800 - L3 LINE CR1 -724 853 630 516 233 195 19 chr2 35497583 35497742 -215190112 + MIR SINE MIR 26 212 -50 1061 248 87 13 chr2 35497784 35498175 -215189679 - MER110A LTR ERV1 0 468 49 8034 4 1 0 chr2 35498541 35499506 -215188348 - L1HS LINE L1 0 6155 5190 * 25206 23 0 0 chr2 35499503 35502494 -215185360 + L1HS LINE L1 2188 5178 -968 23 0 0 0 chr2 35502495 35502518 -215185336 + AT_rich Low_complexity Low_complexity 1 23 0 428 248 25 8 chr2 35502951 35503072 -215184782 - MER94 DNA DNA -11 123 1 216 329 141 12 chr2 35503098 35503183 -215184671 + MIR SINE MIR 16 111 -97 2465 69 3 0 chr2 35503561 35503864 -215183990 - AluY SINE Alu -6 305 2 5420 161 14 2 chr2 35503957 35504846 -215183008 + MER54A LTR ERVL 3 901 0 510 200 222 0 chr2 35505108 35505243 -215182611 - MLT1D LTR MaLR -60 445 281 1300 268 55 30 chr2 35506152 35506600 -215181254 + LTR16A LTR ERVL 1 445 -5 222 62 0 0 chr2 35506721 35506753 -215181101 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 279 294 54 11 chr2 35508001 35508093 -215179761 + MER5A DNA MER1_type 20 115 -74 791 182 35 104 chr2 35508093 35508324 -215179530 - MER20 DNA MER1_type 0 219 5 580 282 88 35 chr2 35508485 35508769 -215179085 - L2 LINE L2 -16 3297 2999 412 210 0 0 chr2 35509155 35509236 -215178618 + MER96 DNA MER1_type? 5 85 -90 725 86 0 35 chr2 35509696 35509812 -215178042 - L1P LINE L1 -1262 4884 4773 * 4188 34 21 0 chr2 35509809 35510340 -215177514 + L1P LINE L1 4843 5384 -762 337 252 65 65 chr2 35512777 35512932 -215174922 + MIR SINE MIR 60 214 -48 281 366 18 0 chr2 35512977 35513089 -215174765 + L2 LINE L2 3151 3264 -8 18969 58 3 1 chr2 35513592 35516977 -215170877 + L1PA4 LINE L1 2 3395 -2751 7374 36 0 2 chr2 35516977 35518644 -215169210 + L1PA3 LINE L1 4491 6155 0 * 15946 44 0 7 chr2 35518640 35521403 -215166451 + L1PA4 LINE L1 3387 6151 -4 1693 205 58 3 chr2 35521737 35522083 -215165771 + MLT1A1 LTR MaLR 1 365 0 2346 105 0 0 chr2 35522608 35522912 -215164942 - AluSx SINE Alu -8 304 1 25 0 0 0 chr2 35524035 35524060 -215163794 + AT_rich Low_complexity Low_complexity 1 25 0 284 51 68 0 chr2 35524130 35524189 -215163665 + (TA)n Simple_repeat Simple_repeat 1 63 0 516 36 95 30 chr2 35524226 35524394 -215163460 + (TA)n Simple_repeat Simple_repeat 1 179 0 181 0 69 0 chr2 35524408 35524437 -215163417 + (TA)n Simple_repeat Simple_repeat 2 32 0 3358 281 157 28 chr2 35524564 35526118 -215161736 + L2 LINE L2 1139 2893 -421 382 219 31 0 chr2 35526170 35526266 -215161588 - MLT1G LTR MaLR 0 590 492 2301 105 3 0 chr2 35526285 35526590 -215161264 - AluY SINE Alu -1 310 5 546 283 90 13 chr2 35526626 35526859 -215160995 - MLT1G LTR MaLR -267 323 73 490 244 48 163 chr2 35526911 35527304 -215160550 + L2 LINE L2 2965 3312 -1 1855 171 0 0 chr2 35527411 35527691 -215160163 + AluSx SINE Alu 1 280 -32 1069 103 11 6 chr2 35527691 35527866 -215159988 + (GAAA)n Simple_repeat Simple_repeat 1 176 0 883 289 59 20 chr2 35528014 35528370 -215159484 - MLT1A2 LTR MaLR -4 370 1 21 0 0 0 chr2 35528432 35528453 -215159401 + AT_rich Low_complexity Low_complexity 1 21 0 3811 146 102 28 chr2 35529228 35530618 -215157236 - pTR5 LTR ERV1 0 2606 1524 1394 330 160 23 chr2 35531936 35532370 -215155484 + L2 LINE L2 1444 1817 -1496 1930 150 17 0 chr2 35532370 35532663 -215155191 - AluSx SINE Alu -14 298 1 1394 330 160 23 chr2 35532663 35533853 -215154001 + L2 LINE L2 1817 3313 0 1885 147 13 10 chr2 35534193 35534499 -215153355 - AluSx SINE Alu -5 307 1 2385 91 0 0 chr2 35534577 35534874 -215152980 - AluSq SINE Alu -16 297 1 23 33 0 0 chr2 35534950 35534980 -215152874 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 35535556 35535577 -215152277 + AT_rich Low_complexity Low_complexity 1 21 0 632 258 41 21 chr2 35535843 35536037 -215151817 - MIR SINE MIR -7 255 58 22 0 0 0 chr2 35536276 35536298 -215151556 + AT_rich Low_complexity Low_complexity 1 22 0 3261 174 30 10 chr2 35536380 35537079 -215150775 + L1MA4A LINE L1 4081 4793 -1353 3119 141 12 18 chr2 35537068 35537777 -215150077 + L1MA4A LINE L1 5127 5832 -471 * 1666 25 0 5 chr2 35538444 35538664 -215149190 + L1PA3 LINE L1 5952 6170 0 37 62 0 0 chr2 35538671 35538736 -215149118 + AT_rich Low_complexity Low_complexity 1 65 0 331 289 67 30 chr2 35539197 35539332 -215148522 - MIR3 SINE MIR -7 201 62 351 0 0 0 chr2 35539961 35540000 -215147854 + (CA)n Simple_repeat Simple_repeat 2 40 0 846 142 27 0 chr2 35540053 35540201 -215147653 - AluJb SINE Alu -1 311 160 571 61 74 12 chr2 35540741 35540904 -215146950 + (TA)n Simple_repeat Simple_repeat 1 173 0 387 0 0 0 chr2 35540919 35540962 -215146892 + (CA)n Simple_repeat Simple_repeat 2 44 0 234 220 0 17 chr2 35540962 35541021 -215146833 + (TA)n Simple_repeat Simple_repeat 1 58 0 225 0 0 0 chr2 35541084 35541109 -215146745 + (GA)n Simple_repeat Simple_repeat 2 26 0 390 218 58 65 chr2 35542601 35542909 -215144945 + L1M4 LINE L1 3029 3334 -2812 8159 201 27 50 chr2 35542920 35544764 -215143090 + L1M2 LINE L1 1 1800 -5049 2290 126 8 21 chr2 35544764 35545144 -215142710 - THE1C LTR MaLR 0 375 1 8159 201 27 50 chr2 35545144 35545246 -215142608 + L1M2 LINE L1 1800 1903 -4946 8523 185 31 25 chr2 35545269 35548330 -215139524 + L1PA8 LINE L1 10 3149 -3312 8339 108 58 9 chr2 35548330 35550357 -215137497 + L1PA8 LINE L1 4418 6485 -2 7456 190 40 11 chr2 35550358 35553290 -215134564 + L1M2 LINE L1 1907 4926 -1922 215 200 0 0 chr2 35553290 35553325 -215134529 + (CA)n Simple_repeat Simple_repeat 2 36 0 435 332 60 30 chr2 35553672 35553904 -215133950 - MIR SINE MIR -12 250 12 215 352 46 9 chr2 35553981 35554089 -215133765 - MIR SINE MIR -25 237 126 2332 90 7 0 chr2 35554117 35554416 -215133438 + AluSc SINE Alu 1 301 -8 184 378 14 0 chr2 35554629 35554703 -215133151 - L2 LINE L2 -2905 409 335 2067 132 7 0 chr2 35555532 35555827 -215132027 - AluSg SINE Alu -13 297 1 3508 86 68 0 chr2 35556162 35556674 -215131180 + L1PA13 LINE L1 5617 6163 0 223 305 57 19 chr2 35556721 35556826 -215131028 - MIR SINE MIR -46 216 108 318 304 48 60 chr2 35557644 35557812 -215130042 - MIR SINE MIR -50 212 47 15318 81 4 15 chr2 35557816 35560116 -215127738 + L1PA5 LINE L1 918 3191 -2955 5160 54 0 0 chr2 35560116 35560744 -215127110 + L1PA5 LINE L1 5526 6154 0 * 17118 56 5 1 chr2 35560741 35563712 -215124142 + L1PA5 LINE L1 3179 6145 -9 5914 165 8 13 chr2 35565735 35567829 -215120025 + L1PA15 LINE L1 4078 6156 -9 297 302 104 39 chr2 35569076 35569258 -215118596 - MIR SINE MIR -10 252 59 252 328 145 15 chr2 35569594 35569725 -215118129 + MIR SINE MIR 5 152 -110 2321 71 3 10 chr2 35569729 35570054 -215117800 + AluY SINE Alu 2 311 0 2068 169 8 16 chr2 35571421 35571789 -215116065 - MLT1A1 LTR MaLR 0 365 1 523 290 115 40 chr2 35572117 35572978 -215114876 + L1ME3A LINE L1 1450 2375 -4021 240 214 145 63 chr2 35573146 35573305 -215114549 + L1ME3A LINE L1 5386 5557 -682 433 307 68 19 chr2 35573501 35573810 -215114044 + L1ME3A LINE L1 5747 6070 -169 1044 55 0 0 chr2 35573810 35573938 -215113916 - L1PA6 LINE L1 -433 5721 5594 3419 58 0 0 chr2 35573938 35574366 -215113488 + L1PA6 LINE L1 5725 6152 -2 307 306 16 49 chr2 35574366 35574549 -215113305 + L1ME3A LINE L1 6059 6235 -4 228 297 45 72 chr2 35574856 35574967 -215112887 - L2 LINE L2 -2 3270 3163 357 326 80 29 chr2 35575796 35576035 -215111819 + MIR SINE MIR 3 253 -9 523 288 59 12 chr2 35577036 35577206 -215110648 + LTR33 LTR ERVL 4 181 -340 331 369 20 10 chr2 35577267 35577462 -215110392 + LTR33 LTR ERVL 304 500 -21 889 296 109 3 chr2 35577884 35578168 -215109686 + LTR16A LTR ERVL 135 448 -2 1875 229 127 22 chr2 35578278 35578815 -215109039 - MLT1E LTR MaLR 0 593 1 363 363 47 10 chr2 35579971 35580164 -215107690 - MIR SINE MIR -55 207 8 1971 102 4 4 chr2 35581082 35581346 -215106508 - AluSx SINE Alu -21 291 28 370 115 103 0 chr2 35581453 35581540 -215106314 - AluSq/x SINE Alu -197 106 11 22 0 0 0 chr2 35581670 35581692 -215106162 + AT_rich Low_complexity Low_complexity 1 22 0 184 315 0 90 chr2 35581871 35581960 -215105894 - L2 LINE L2 -3228 86 6 21 36 0 0 chr2 35582872 35582900 -215104954 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr2 35584178 35584204 -215103650 + (TA)n Simple_repeat Simple_repeat 2 27 0 1746 88 0 0 chr2 35584204 35584419 -215103435 - AluSg/x SINE Alu -12 298 84 2166 117 3 3 chr2 35585601 35585901 -215101953 + AluSg SINE Alu 1 300 -10 22 35 0 0 chr2 35585988 35586017 -215101837 + AT_rich Low_complexity Low_complexity 1 29 0 344 220 89 77 chr2 35586445 35586594 -215101260 - MIR3 SINE MIR -52 156 37 188 194 65 65 chr2 35586852 35586914 -215100940 + MIR3 SINE MIR 140 201 -7 11079 174 16 35 chr2 35588892 35589390 -215098464 - L1MA2 LINE L1 -194 7529 7023 2173 119 53 19 chr2 35589390 35589751 -215098103 + THE1C LTR MaLR 3 375 0 11079 174 16 35 chr2 35589751 35592139 -215095715 - L1MA2 LINE L1 -700 7023 4628 553 141 0 0 chr2 35592139 35592231 -215095623 - AluSp/q SINE Alu 0 313 222 11079 174 16 35 chr2 35592231 35592642 -215095212 - L1MA2 LINE L1 -3095 4628 4210 1911 122 56 88 chr2 35592642 35593018 -215094836 - THE1B LTR MaLR 0 364 1 442 116 0 0 chr2 35593018 35593087 -215094767 - THE1B-int LTR MaLR 0 1580 1512 * 1957 105 21 0 chr2 35593082 35593367 -215094487 - THE1B-int LTR MaLR -1289 291 1 1920 161 27 35 chr2 35593367 35593622 -215094232 - THE1B LTR MaLR 0 364 111 2235 127 0 0 chr2 35593622 35593930 -215093924 - AluSx SINE Alu -4 308 1 1920 161 27 35 chr2 35593930 35594041 -215093813 - THE1B LTR MaLR -253 111 1 15372 161 134 45 chr2 35594041 35594657 -215093197 - L1MA2 LINE L1 -3351 4214 3654 2068 126 7 0 chr2 35594657 35594959 -215092895 - AluSc SINE Alu -5 304 1 15372 161 134 45 chr2 35594959 35596023 -215091831 - L1MA2 LINE L1 -3911 3654 2686 276 89 0 0 chr2 35596023 35596068 -215091786 - AluSx SINE Alu -2 299 255 15372 161 134 45 chr2 35596068 35597264 -215090590 - L1MA2 LINE L1 -4879 2686 1598 2587 123 0 3 chr2 35597264 35597629 -215090225 - THE1B LTR MaLR 0 364 1 15372 161 134 45 chr2 35597629 35597725 -215090129 - L1MA2 LINE L1 -5967 1598 1512 1611 172 55 33 chr2 35597725 35598092 -215089762 + THE1C LTR MaLR 1 375 0 9233 141 11 47 chr2 35598096 35599730 -215088124 + THE1C-int LTR MaLR 5 1580 0 1592 154 199 8 chr2 35599731 35599916 -215087938 + MSTA LTR MaLR 2 150 -278 204 40 0 0 chr2 35599916 35599941 -215087913 + (TC)n Simple_repeat Simple_repeat 2 26 0 1592 154 199 8 chr2 35599941 35600112 -215087742 + MSTA LTR MaLR 150 426 -2 15372 161 134 45 chr2 35600112 35600934 -215086920 - L1MA2 LINE L1 -6054 1511 16 219 364 34 11 chr2 35602446 35602534 -215085320 - L2 LINE L2 -21 3292 3203 405 39 0 0 chr2 35602622 35602673 -215085181 + (TG)n Simple_repeat Simple_repeat 2 52 0 28 0 0 0 chr2 35602702 35602730 -215085124 + AT_rich Low_complexity Low_complexity 1 28 0 1743 229 154 12 chr2 35603062 35603555 -215084299 + MLT1F1 LTR MaLR 3 565 -2 574 301 24 45 chr2 35603929 35604175 -215083679 - L3 LINE CR1 -109 1468 1228 220 339 179 9 chr2 35604340 35604452 -215083402 - MIR SINE MIR -75 187 57 21 57 0 0 chr2 35604829 35604864 -215082990 + AT_rich Low_complexity Low_complexity 1 35 0 223 261 57 89 chr2 35605384 35605496 -215082358 + MIR SINE MIR 36 143 -119 2224 125 31 3 chr2 35605496 35605847 -215082007 + MER46B DNA MER2_type 1 236 0 223 261 57 89 chr2 35605847 35605891 -215081963 + MIR SINE MIR 143 187 -75 22 0 0 0 chr2 35606061 35606083 -215081771 + AT_rich Low_complexity Low_complexity 1 22 0 31269 115 12 59 chr2 35606128 35612131 -215075723 + L1P3 LINE L1 12 5725 -429 1655 143 4 8 chr2 35712131 35712383 -214975471 - AluSx SINE Alu -61 251 1 2052 122 27 0 chr2 35713185 35713479 -214974375 + AluSx SINE Alu 1 302 -10 2665 77 6 3 chr2 35714069 35714421 -214973433 - THE1A LTR MaLR 0 355 3 233 245 0 0 chr2 35714447 35714500 -214973354 + T-rich Low_complexity Low_complexity 1 53 0 1638 233 103 24 chr2 35715065 35715533 -214972321 + MLT1D LTR MaLR 1 505 0 3750 159 35 5 chr2 35715598 35716347 -214971507 + L1MA4 LINE L1 5529 6299 -1 540 144 58 29 chr2 35717454 35717593 -214970261 + Tigger6 DNA MER2_type 1308 1450 -147 3523 203 47 26 chr2 35718612 35719420 -214968434 + Tigger6a DNA MER2_type 1 825 -258 495 209 72 46 chr2 35719424 35719534 -214968320 - L1MD2 LINE L1 -114 6245 6128 192 40 0 0 chr2 35719534 35719559 -214968295 + (TG)n Simple_repeat Simple_repeat 2 26 0 495 209 72 46 chr2 35719559 35719601 -214968253 - L1MD2 LINE L1 -231 6128 6089 1081 191 4 33 chr2 35719911 35720183 -214967671 + Tigger6a DNA MER2_type 819 1082 -1 2406 68 14 0 chr2 35721346 35721641 -214966213 - AluY SINE Alu -9 302 4 209 250 0 18 chr2 35721838 35721894 -214965960 + (TA)n Simple_repeat Simple_repeat 2 56 0 412 234 105 23 chr2 35721901 35722072 -214965782 - L1MC4a LINE L1 -1924 5884 5700 277 320 60 10 chr2 35722500 35722600 -214965254 - MER5A DNA MER1_type -82 107 3 1556 240 86 31 chr2 35722847 35723302 -214964552 + MLT2B1 LTR ERVL 1 480 -40 2464 80 11 25 chr2 35723429 35723832 -214964022 + LTR7 LTR ERV1 1 442 -8 15127 117 14 23 chr2 35723840 35726720 -214961134 + HERVH LTR ERV1 1 2987 -4726 911 135 7 0 chr2 35726714 35726862 -214960992 + HERVH LTR ERV1 3140 3288 -4425 * 3184 121 18 6 chr2 35726854 35727350 -214960504 + HERVH LTR ERV1 3492 3993 -3720 1182 118 38 0 chr2 35727352 35727538 -214960316 + HERVH LTR ERV1 4488 4680 -3033 * 4170 93 2 2 chr2 35727524 35728136 -214959718 + HERVH LTR ERV1 5769 6380 -1333 * 7579 103 37 5 chr2 35728109 35729249 -214958605 + HERVH LTR ERV1 6529 7704 -9 2752 87 90 2 chr2 35729255 35729667 -214958187 + LTR7 LTR ERV1 1 448 -2 275 198 18 18 chr2 35729885 35729996 -214957858 + (TA)n Simple_repeat Simple_repeat 1 111 0 26 0 0 0 chr2 35730581 35730607 -214957247 + AT_rich Low_complexity Low_complexity 1 26 0 302 45 23 0 chr2 35730667 35730711 -214957143 + (CA)n Simple_repeat Simple_repeat 2 46 0 269 271 177 57 chr2 35731099 35731291 -214956563 + MIR SINE MIR 21 235 -27 25 31 0 0 chr2 35731392 35731424 -214956430 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr2 35731905 35731927 -214955927 + AT_rich Low_complexity Low_complexity 1 22 0 1361 157 62 115 chr2 35732064 35732421 -214955433 + MER7A DNA MER2_type 1 336 -10 220 349 132 8 chr2 35734479 35734608 -214953246 + MIR SINE MIR 20 164 -98 2741 76 98 2 chr2 35734608 35735017 -214952837 - LTR7 LTR ERV1 -2 448 1 2333 111 48 13 chr2 35735017 35735396 -214952458 - HERVH LTR ERV1 0 7713 7322 1320 148 19 0 chr2 35735394 35735610 -214952244 - HERVH LTR ERV1 -1894 5819 5600 * 4353 137 6 1 chr2 35735611 35736270 -214951584 - HERVH LTR ERV1 -2564 5149 4488 3197 120 10 8 chr2 35736264 35736772 -214951082 - HERVH LTR ERV1 -3713 4000 3492 * 912 129 27 0 chr2 35736762 35736909 -214950945 - HERVH LTR ERV1 -4423 3290 3140 * 17363 111 43 53 chr2 35736906 35739920 -214947934 - HERVH LTR ERV1 -4729 2984 1 2403 138 95 7 chr2 35739922 35740334 -214947520 - LTR7 LTR ERV1 -2 448 1 2392 84 0 0 chr2 35742659 35742955 -214944899 + AluSq SINE Alu 2 297 -16 1973 216 90 4 chr2 35742963 35743441 -214944413 - LTR53 LTR ERVL 0 519 1 23 0 0 0 chr2 35745019 35745042 -214942812 + AT_rich Low_complexity Low_complexity 1 23 0 203 146 24 0 chr2 35745420 35745461 -214942393 + (CA)n Simple_repeat Simple_repeat 1 42 0 2215 71 35 3 chr2 35745630 35745913 -214941941 + AluY SINE Alu 3 294 -17 490 246 58 0 chr2 35745924 35746095 -214941759 - L1MA7 LINE L1 -4 6287 6107 410 332 72 21 chr2 35746850 35747043 -214940811 - MIR SINE MIR -1 261 59 1806 127 3 48 chr2 35747043 35747210 -214940644 - AluSc SINE Alu -9 300 152 225 0 0 0 chr2 35747210 35747235 -214940619 + (TA)n Simple_repeat Simple_repeat 1 25 0 1806 127 3 48 chr2 35747235 35747381 -214940473 - AluSc SINE Alu -157 152 1 339 304 81 71 chr2 35747457 35747766 -214940088 - MLT1J LTR MaLR -65 446 135 414 296 67 67 chr2 35748185 35748329 -214939525 - L2 LINE L2 0 3313 3167 230 81 27 0 chr2 35748329 35748366 -214939488 + (TA)n Simple_repeat Simple_repeat 2 39 0 414 296 67 67 chr2 35748366 35748461 -214939393 - L2 LINE L2 -145 3168 3074 450 225 30 6 chr2 35749141 35749310 -214938544 + (TA)n Simple_repeat Simple_repeat 1 173 0 496 289 6 33 chr2 35749328 35749508 -214938346 + (CATATA)n Simple_repeat Simple_repeat 2 176 0 196 238 33 33 chr2 35749551 35749702 -214938152 + (CATATA)n Simple_repeat Simple_repeat 2 152 0 274 248 6 25 chr2 35749717 35749874 -214937980 + (CA)n Simple_repeat Simple_repeat 1 154 0 239 310 0 30 chr2 35749886 35749986 -214937868 + (CA)n Simple_repeat Simple_repeat 2 98 0 214 229 0 24 chr2 35749998 35750081 -214937773 + (CA)n Simple_repeat Simple_repeat 2 82 0 213 220 0 20 chr2 35750093 35750143 -214937711 + (CA)n Simple_repeat Simple_repeat 2 50 0 421 285 0 34 chr2 35750158 35750517 -214937337 + (CA)n Simple_repeat Simple_repeat 1 346 0 259 264 0 29 chr2 35750529 35750703 -214937151 + (CA)n Simple_repeat Simple_repeat 2 170 0 305 286 0 31 chr2 35750715 35750813 -214937041 + (CA)n Simple_repeat Simple_repeat 2 96 0 507 256 0 87 chr2 35750825 35751020 -214936834 + (CA)n Simple_repeat Simple_repeat 2 179 0 236 247 0 67 chr2 35751021 35751110 -214936744 - L1MC4 LINE L1 -1345 6697 6615 261 139 0 0 chr2 35751165 35751208 -214936646 + (CA)n Simple_repeat Simple_repeat 2 44 0 927 209 121 41 chr2 35751223 35751538 -214936316 - MER2 DNA MER2_type -3 341 2 453 110 0 0 chr2 35751539 35751612 -214936242 + (TG)n Simple_repeat Simple_repeat 2 74 0 249 314 40 32 chr2 35752254 35752378 -214935476 + MIR SINE MIR 8 132 -130 23 0 0 0 chr2 35752732 35752755 -214935099 + AT_rich Low_complexity Low_complexity 1 23 0 1091 148 23 51 chr2 35752836 35753052 -214934802 - THE1B LTR MaLR 0 364 155 5024 17 2 0 chr2 35753052 35753629 -214934225 + L1HS LINE L1 5577 6154 -1 216 149 0 0 chr2 35753632 35753679 -214934175 + (A)n Simple_repeat Simple_repeat 1 47 0 988 124 98 0 chr2 35753679 35753832 -214934022 - THE1B LTR MaLR -196 168 1 542 324 55 66 chr2 35753914 35754383 -214933471 + L1M4 LINE L1 3553 4016 -2130 26 0 0 0 chr2 35754557 35754583 -214933271 + AT_rich Low_complexity Low_complexity 1 26 0 2911 155 20 65 chr2 35755429 35756069 -214931785 + LTR38B LTR ERV1 1 611 0 23 0 0 0 chr2 35756435 35756458 -214931396 + AT_rich Low_complexity Low_complexity 1 23 0 221 184 0 20 chr2 35756763 35756812 -214931042 + GA-rich Low_complexity Low_complexity 1 48 0 524 248 57 0 chr2 35758375 35758516 -214929338 - Charlie1b DNA MER1_type -326 197 49 328 236 55 0 chr2 35758845 35758972 -214928882 + (TA)n Simple_repeat Simple_repeat 2 135 0 21 0 0 0 chr2 35759057 35759078 -214928776 + AT_rich Low_complexity Low_complexity 1 21 0 315 239 0 14 chr2 35760215 35760286 -214927568 - MLT1C LTR MaLR 0 467 398 2134 114 7 7 chr2 35760638 35760945 -214926909 + AluSx SINE Alu 1 307 -5 446 331 8 8 chr2 35761072 35761199 -214926655 - L2 LINE L2 -5 3308 3182 363 338 60 66 chr2 35761453 35762037 -214925817 + L2 LINE L2 2478 3055 -217 10114 185 73 4 chr2 35762194 35764480 -214923374 - L1 LINE L1 -1004 6561 4118 3320 183 29 19 chr2 35764481 35765103 -214922751 - L1 LINE L1 -6886 679 52 241 305 57 43 chr2 35765948 35766089 -214921765 + MIR SINE MIR 76 218 -44 28 61 0 0 chr2 35766124 35766173 -214921681 + AT_rich Low_complexity Low_complexity 1 49 0 199 120 20 20 chr2 35767229 35767279 -214920575 + GA-rich Low_complexity Low_complexity 2 51 0 230 139 0 0 chr2 35767279 35767315 -214920539 + (GGA)n Simple_repeat Simple_repeat 3 38 0 603 210 12 6 chr2 35767316 35767483 -214920371 + GA-rich Low_complexity Low_complexity 1 168 0 5911 206 26 14 chr2 35767952 35768588 -214919266 + L1PA16 LINE L1 3787 4414 -1752 1881 138 58 25 chr2 35768588 35768951 -214918903 + THE1C LTR MaLR 1 375 0 5911 206 26 14 chr2 35768951 35770666 -214917188 + L1PA16 LINE L1 4414 6160 -6 1443 208 47 38 chr2 35770666 35771007 -214916847 + L1MC3 LINE L1 7091 7434 -351 4337 188 22 3 chr2 35771023 35771923 -214915931 + L1MA4 LINE L1 3679 4595 -1551 * 4594 193 66 2 chr2 35771918 35772106 -214915748 + L1MA4 LINE L1 5101 5275 -1025 411 21 0 0 chr2 35772106 35772154 -214915700 + (CAT)n Simple_repeat Simple_repeat 2 49 0 4594 193 66 2 chr2 35772154 35772198 -214915656 + L1MA4 LINE L1 5275 5315 -985 2966 106 33 31 chr2 35772198 35772681 -214915173 - L1PA14 LINE L1 -9 6152 5669 4594 193 66 2 chr2 35772681 35773588 -214914266 + L1MA4 LINE L1 5315 6288 -12 912 187 34 5 chr2 35773941 35774160 -214913694 + L1MC3 LINE L1 6110 6333 -11 26 50 0 0 chr2 35775191 35775231 -214912623 + AT_rich Low_complexity Low_complexity 1 40 0 293 254 64 27 chr2 35775624 35775734 -214912120 - MER96B DNA MER1_type? -10 407 294 25 99 0 0 chr2 35775851 35775932 -214911922 + AT_rich Low_complexity Low_complexity 1 81 0 25 0 0 0 chr2 35776006 35776031 -214911823 + AT_rich Low_complexity Low_complexity 1 25 0 1598 177 35 29 chr2 35776031 35776341 -214911513 + AluJo SINE Alu 1 312 0 239 179 18 0 chr2 35776342 35776398 -214911456 + L1MA3 LINE L1 6249 6305 0 580 251 78 14 chr2 35776468 35776687 -214911167 + MER96B DNA MER1_type? 185 417 0 793 170 0 14 chr2 35778064 35778205 -214909649 - L1PB4 LINE L1 -12 6144 6006 1129 261 61 71 chr2 35778218 35778708 -214909146 - MLT2B1 LTR ERVL -34 486 2 502 191 0 0 chr2 35778708 35778802 -214909052 + MLT1D LTR MaLR 408 501 -4 5028 162 16 15 chr2 35778884 35779265 -214908589 - L1PBa LINE L1 -2837 4025 3646 2258 75 3 0 chr2 35779265 35779557 -214908297 - AluY SINE Alu -16 295 3 5028 162 16 15 chr2 35779557 35782373 -214905481 - L1PBa LINE L1 -3216 3646 618 1054 197 5 0 chr2 35782351 35782549 -214905305 - L1PBa LINE L1 -6663 200 2 * 348 245 46 22 chr2 35782634 35782758 -214905096 + MER63 DNA MER1_type 1 750 -86 187 343 39 10 chr2 35782898 35783000 -214904854 + L2 LINE L2 2272 2376 -938 1050 248 79 57 chr2 35783083 35783539 -214904315 + MLT1C LTR MaLR 1 466 -1 324 394 59 36 chr2 35783620 35784008 -214903846 + L2 LINE L2 2872 3268 -4 237 178 0 0 chr2 35785196 35785241 -214902613 + (CA)n Simple_repeat Simple_repeat 2 46 0 301 154 64 6 chr2 35785681 35785738 -214902116 + (TA)n Simple_repeat Simple_repeat 1 53 -112 2503 171 28 6 chr2 35785738 35786236 -214901618 - L1MA5 LINE L1 -6 6294 5786 301 154 64 6 chr2 35786236 35786334 -214901520 + (TA)n Simple_repeat Simple_repeat 53 165 0 2618 163 59 12 chr2 35786338 35786943 -214900911 - L1MA5 LINE L1 -509 5791 5164 19626 180 22 24 chr2 35787006 35791160 -214896694 + L1MA1 LINE L1 1 4161 -3555 264 209 0 0 chr2 35791160 35791203 -214896651 - 5S rRNA rRNA -78 43 1 19626 180 22 24 chr2 35791203 35791821 -214896033 + L1MA1 LINE L1 4161 4779 -2937 2397 72 0 7 chr2 35791821 35792125 -214895729 - AluY SINE Alu -9 302 1 19626 180 22 24 chr2 35792125 35794918 -214892936 + L1MA1 LINE L1 4779 7545 -171 400 175 0 0 chr2 35794918 35794998 -214892856 - MADE1 DNA Mariner 0 80 1 19626 180 22 24 chr2 35794998 35795170 -214892684 + L1MA1 LINE L1 7545 7716 0 24 32 0 0 chr2 35795170 35795201 -214892653 + AT_rich Low_complexity Low_complexity 1 31 0 1926 181 24 3 chr2 35795546 35795928 -214891926 - MLT1B LTR MaLR 0 390 1 400 304 110 13 chr2 35796783 35797010 -214890844 - MIR SINE MIR -5 257 9 1473 149 8 12 chr2 35797296 35797544 -214890310 - AluSx SINE Alu -16 296 50 195 204 0 0 chr2 35797582 35797631 -214890223 + (CA)n Simple_repeat Simple_repeat 1 49 0 2869 323 107 62 chr2 35798039 35798734 -214889120 - L2 LINE L2 0 3313 2651 266 164 0 49 chr2 35798734 35798795 -214889059 + L1MA9 LINE L1 6225 6282 -30 2869 323 107 62 chr2 35798795 35800950 -214886904 - L2 LINE L2 -662 2651 256 275 298 35 70 chr2 35802383 35802497 -214885357 - MIR SINE MIR -137 125 16 189 0 0 0 chr2 35803053 35803074 -214884780 + (CAGT)n Simple_repeat Simple_repeat 4 24 0 204 233 17 0 chr2 35803931 35803991 -214883863 + (TTTG)n Simple_repeat Simple_repeat 3 63 0 2117 155 19 16 chr2 35804753 35805127 -214882727 - THE1C LTR MaLR 0 375 1 24 0 0 0 chr2 35805866 35805890 -214881964 + AT_rich Low_complexity Low_complexity 1 24 0 1982 111 27 0 chr2 35806175 35806473 -214881381 - L1PA13 LINE L1 0 6163 5858 380 355 44 47 chr2 35806789 35807085 -214880769 + L3 LINE CR1 1279 1573 -4 733 286 112 0 chr2 35808286 35808510 -214879344 + MIR SINE MIR 1 249 -13 186 196 54 18 chr2 35809411 35809467 -214878387 - MER5C DNA MER1_type -114 210 153 1708 127 0 4 chr2 35809467 35809766 -214878088 - AluSx SINE Alu 0 348 51 23 20 0 61 chr2 35810280 35810329 -214877525 + AT_rich Low_complexity Low_complexity 1 46 0 255 298 0 0 chr2 35811057 35811114 -214876740 + L2 LINE L2 3214 3270 -2 462 269 22 0 chr2 35811289 35811423 -214876431 + L1MB7 LINE L1 22 158 -6384 2371 243 15 19 chr2 35811451 35812125 -214875729 + L1MB7 LINE L1 4116 4786 -1858 3241 226 51 6 chr2 35812138 35812956 -214874898 + L1MB7 LINE L1 5827 6681 -1 302 175 12 25 chr2 35814167 35814247 -214873607 - L1ME2 LINE L1 -1 6163 6085 731 274 33 62 chr2 35814261 35814358 -214873496 - L1MCc LINE L1 -2421 4520 4422 2270 121 0 0 chr2 35814358 35814665 -214873189 + AluSg SINE Alu 1 307 -3 731 274 33 62 chr2 35814665 35815019 -214872835 - L1MCc LINE L1 -2519 4422 4082 1534 306 74 34 chr2 35815062 35816934 -214870920 - L1MCc LINE L1 -4163 2959 807 1042 79 23 17 chr2 35817316 35817493 -214870361 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 213 121 0 0 chr2 35817495 35817528 -214870326 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 412 235 77 77 chr2 35817530 35817551 -214870303 - L1MCc LINE L1 -5975 448 428 1928 135 21 0 chr2 35817551 35817839 -214870015 - AluSq SINE Alu -19 294 1 412 235 77 77 chr2 35817839 35817987 -214869867 - L1MCc LINE L1 -5994 429 279 378 236 47 16 chr2 35817990 35818117 -214869737 - L1MCc LINE L1 -6254 169 39 386 274 91 48 chr2 35818182 35818390 -214869464 - L1MEc LINE L1 -4127 2269 2053 2327 98 0 0 chr2 35818408 35818715 -214869139 - AluSg SINE Alu -3 307 1 21 0 0 0 chr2 35818715 35818736 -214869118 + AT_rich Low_complexity Low_complexity 1 21 0 6300 164 19 5 chr2 35818736 35820852 -214867002 - L1MA1 LINE L1 -4 7717 5496 6100 195 42 16 chr2 35820853 35822114 -214865740 - L1MA1 LINE L1 -6256 1309 16 1449 325 49 60 chr2 35822121 35823297 -214864557 - L1MEc LINE L1 -4330 2066 918 2152 146 14 30 chr2 35823297 35823667 -214864187 + THE1B LTR MaLR 1 364 0 1449 325 49 60 chr2 35823667 35824540 -214863314 - L1MEc LINE L1 -5478 918 38 22 0 0 0 chr2 35824839 35824861 -214862993 + AT_rich Low_complexity Low_complexity 1 22 0 37 23 0 0 chr2 35825106 35825150 -214862704 + AT_rich Low_complexity Low_complexity 1 44 0 198 303 0 135 chr2 35828425 35828514 -214859340 + L2 LINE L2 3100 3176 -96 239 271 0 0 chr2 35829071 35829121 -214858733 + polypyrimidine Low_complexity Low_complexity 1 50 0 234 219 0 0 chr2 35829724 35829788 -214858066 + CT-rich Low_complexity Low_complexity 2 65 0 1274 198 0 0 chr2 35831349 35831597 -214856257 - L1PA13 LINE L1 -4 6159 5912 22 0 0 0 chr2 35832150 35832172 -214855682 + AT_rich Low_complexity Low_complexity 1 22 0 210 222 0 0 chr2 35833089 35833143 -214854711 + (TA)n Simple_repeat Simple_repeat 1 54 0 191 383 62 13 chr2 35833160 35833387 -214854467 + L2 LINE L2 2638 2875 -439 792 261 8 19 chr2 35833536 35833804 -214854050 - L1MA9 LINE L1 -34 6278 6014 299 391 31 12 chr2 35833952 35834113 -214853741 + L2 LINE L2 3109 3272 0 485 343 116 0 chr2 35835263 35835496 -214852358 + MIR SINE MIR 3 262 0 447 19 0 0 chr2 35836257 35836309 -214851545 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 1733 66 9 0 chr2 35836690 35836918 -214850936 + L1PA8 LINE L1 5939 6168 -4 333 0 0 0 chr2 35837369 35837406 -214850448 + (TG)n Simple_repeat Simple_repeat 2 38 0 1862 59 0 0 chr2 35837833 35838054 -214849800 - AluY SINE Alu -11 300 80 355 217 14 0 chr2 35839150 35839219 -214848635 - MIR SINE MIR -42 220 151 258 314 121 7 chr2 35840264 35840404 -214847450 + MIR SINE MIR 32 187 -75 314 23 23 0 chr2 35841596 35841639 -214846215 + (GGAA)n Simple_repeat Simple_repeat 1 44 0 257 297 141 49 chr2 35841650 35841835 -214846019 + MIR SINE MIR 31 232 -30 2015 151 3 0 chr2 35841840 35842151 -214845703 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 35843322 35843344 -214844510 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 35843572 35843593 -214844261 + AT_rich Low_complexity Low_complexity 1 21 0 536 255 82 20 chr2 35844992 35845188 -214842666 + MIR SINE MIR 54 261 -1 993 172 47 31 chr2 35845662 35845891 -214841963 - AluJo SINE Alu 0 318 87 395 209 9 0 chr2 35846005 35846115 -214841739 + (CA)n Simple_repeat Simple_repeat 2 112 0 1198 141 51 39 chr2 35846276 35846532 -214841322 + MER44D DNA MER2_type 1 529 -80 229 114 0 0 chr2 35846548 35846592 -214841262 + LTR66 LTR ERVL 394 437 -173 471 218 0 0 chr2 35846611 35846698 -214841156 + MER44D DNA MER2_type 523 609 0 274 298 111 41 chr2 35847086 35847257 -214840597 - MIR SINE MIR -11 251 69 211 310 101 39 chr2 35847513 35847642 -214840212 + MIR SINE MIR 68 204 -58 241 257 14 0 chr2 35847761 35847835 -214840019 + A-rich Low_complexity Low_complexity 2 76 0 2181 94 3 3 chr2 35847978 35848276 -214839578 - AluSg SINE Alu -12 298 1 1105 248 64 15 chr2 35848511 35848838 -214839016 + MLT1A1 LTR MaLR 12 354 -11 272 414 101 11 chr2 35848845 35849123 -214838731 - L2 LINE L2 -42 3230 2928 358 108 46 15 chr2 35849235 35849300 -214838554 - L1MB5 LINE L1 -12 6162 6096 962 205 79 68 chr2 35849385 35849795 -214838059 + MER66A LTR ERV1 97 465 -13 1442 224 32 1 chr2 35849866 35850181 -214837673 - L1MB5 LINE L1 -74 6100 5778 2045 228 20 13 chr2 35850207 35850752 -214837102 + L1PA15-16 LINE L1 2075 2623 -4226 2152 202 13 40 chr2 35850822 35851240 -214836614 + L1PA15-16 LINE L1 4070 4475 -2374 2228 116 0 0 chr2 35851240 35851543 -214836311 + AluSc SINE Alu 1 303 -6 2152 202 13 40 chr2 35851543 35851600 -214836254 + L1PA15-16 LINE L1 4475 4532 -2317 830 219 72 39 chr2 35851601 35851907 -214835947 + L1ME2 LINE L1 4545 4860 -1286 * 1768 240 50 27 chr2 35851901 35852426 -214835428 - L1MD2 LINE L1 0 6359 5823 5022 181 37 51 chr2 35852888 35854170 -214833684 - L1MC1 LINE L1 -1 6332 5071 753 278 68 36 chr2 35854173 35854482 -214833372 - L1MC1 LINE L1 -1793 4353 4035 1969 89 0 25 chr2 35855139 35855419 -214832435 - AluY SINE Alu -13 298 26 268 158 53 0 chr2 35856664 35856759 -214831095 + (TA)n Simple_repeat Simple_repeat 1 100 0 2305 266 39 30 chr2 35857016 35857706 -214830148 - L1ME1 LINE L1 -11 6155 5448 2137 100 0 0 chr2 35857706 35857986 -214829868 + AluSq SINE Alu 6 285 -28 2305 266 39 30 chr2 35857986 35858489 -214829365 - L1ME1 LINE L1 -718 5448 4951 2395 230 51 48 chr2 35858493 35859517 -214828337 + L1ME2 LINE L1 5122 6145 -19 232 229 34 42 chr2 35859840 35859958 -214827896 + L1ME3 LINE L1 6045 6161 -1 499 211 11 22 chr2 35862738 35862918 -214824936 + CT-rich Low_complexity Low_complexity 3 180 0 223 322 7 105 chr2 35863492 35863644 -214824210 + L3 LINE CR1 1440 1576 -1 7831 199 49 19 chr2 35864542 35866187 -214821667 - MER89-int LTR ERV1 -2646 4030 2336 * 9853 184 50 41 chr2 35866175 35867561 -214820293 - MER89-int LTR ERV1 -4507 2169 755 13019 30 6 0 chr2 35867561 35869903 -214817951 + L1PA3 LINE L1 3810 6152 -3 9853 184 50 41 chr2 35869903 35870643 -214817211 - MER89-int LTR ERV1 -5921 755 23 226 235 20 0 chr2 35870684 35870735 -214817119 - MER3 DNA MER1_type -126 83 32 27 29 0 0 chr2 35871345 35871379 -214816475 + AT_rich Low_complexity Low_complexity 1 34 0 28 61 0 0 chr2 35871463 35871512 -214816342 + AT_rich Low_complexity Low_complexity 1 49 0 2403 94 0 0 chr2 35872187 35872496 -214815358 - AluSc SINE Alu 0 309 1 284 329 42 35 chr2 35872558 35872701 -214815153 + MIR SINE MIR 37 180 -82 216 182 0 0 chr2 35872721 35872765 -214815089 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 400 332 89 26 chr2 35872856 35873046 -214814808 - MIR SINE MIR -35 227 26 2411 74 3 3 chr2 35873190 35873501 -214814353 - AluSp SINE Alu 0 313 3 218 230 129 72 chr2 35873927 35874066 -214813788 + L2 LINE L2 1853 1999 -1315 1512 234 25 50 chr2 35874195 35874242 -214813612 - MER89 LTR ERV1 0 559 512 1833 166 65 38 chr2 35874242 35874659 -214813195 - MSTC LTR MaLR 0 428 1 1512 234 25 50 chr2 35874659 35875009 -214812845 - MER89 LTR ERV1 -47 512 172 22 35 0 0 chr2 35876043 35876072 -214811782 + AT_rich Low_complexity Low_complexity 1 29 0 2020 216 115 42 chr2 35876109 35876846 -214811008 - L1ME3 LINE L1 -117 6045 5255 833 195 22 0 chr2 35877265 35877450 -214810404 + L1MA6 LINE L1 6112 6300 0 25 65 0 0 chr2 35877623 35877669 -214810185 + AT_rich Low_complexity Low_complexity 1 46 0 24 0 0 0 chr2 35877830 35877854 -214810000 + AT_rich Low_complexity Low_complexity 1 24 0 287 276 19 38 chr2 35878104 35878209 -214809645 - MER94 DNA DNA -22 112 10 421 315 47 29 chr2 35878227 35878470 -214809384 - L1ME LINE L1 -587 5579 5336 258 275 50 75 chr2 35880981 35881101 -214806753 - L2 LINE L2 0 3272 3156 901 311 108 18 chr2 35881314 35881512 -214806342 + L1MB7 LINE L1 1034 1213 -5171 309 51 0 0 chr2 35881512 35881551 -214806303 + (CA)n Simple_repeat Simple_repeat 2 40 0 901 311 108 18 chr2 35881551 35882027 -214805827 + L1MB7 LINE L1 1213 1769 -4615 526 289 119 32 chr2 35882039 35882351 -214805503 + L1MB7 LINE L1 2036 2374 -4189 7285 43 51 23 chr2 35882445 35883406 -214804448 - L1PA5 LINE L1 -6 6148 5183 1101 174 22 84 chr2 35883407 35883731 -214804123 - MER67D LTR ERV1 -243 271 5 5103 183 18 4 chr2 35883831 35885122 -214802732 + L1PA16 LINE L1 4852 6166 0 382 285 80 0 chr2 35885126 35885277 -214802577 + L1MB7 LINE L1 4090 4252 -2130 254 266 25 0 chr2 35885349 35885428 -214802426 - LTR66 LTR ERVL -136 474 394 297 204 24 175 chr2 35885446 35885657 -214802197 + L1MB7 LINE L1 4400 4578 -1804 241 188 29 58 chr2 35885728 35885797 -214802057 + MER82 DNA MER2_type 32 98 -555 21 0 0 0 chr2 35885849 35885870 -214801984 + AT_rich Low_complexity Low_complexity 1 21 0 257 400 27 13 chr2 35885889 35886039 -214801815 - MIR SINE MIR -110 152 1 944 280 0 5 chr2 35886069 35886280 -214801574 + MER82 DNA MER2_type 444 653 0 2328 266 54 25 chr2 35886280 35886396 -214801458 + L1MB7 LINE L1 4647 4758 -1662 2228 91 7 23 chr2 35886396 35886703 -214801151 - AluSx SINE Alu -10 302 1 2328 266 54 25 chr2 35886703 35888305 -214799549 + L1MB7 LINE L1 4758 6410 -10 550 354 6 0 chr2 35888980 35889144 -214798710 + MER58A DNA MER1_type 1 165 0 1252 216 4 30 chr2 35889453 35889722 -214798132 + AluJo SINE Alu 6 267 -45 202 200 0 0 chr2 35889785 35889807 -214798047 + (TTA)n Simple_repeat Simple_repeat 3 24 -23 2084 139 47 85 chr2 35889807 35890252 -214797602 - MSTA LTR MaLR 0 428 1 202 200 0 0 chr2 35890252 35890274 -214797580 + (TTA)n Simple_repeat Simple_repeat 23 47 0 32 26 0 0 chr2 35890680 35890719 -214797135 + AT_rich Low_complexity Low_complexity 1 39 0 924 136 0 0 chr2 35891841 35891973 -214795881 - AluSq/x SINE Alu -180 132 1 250 397 40 16 chr2 35894116 35894242 -214793612 - L2 LINE L2 -15 3257 3129 2124 96 14 0 chr2 35894443 35894734 -214793120 + AluSc SINE Alu 4 298 -11 1063 212 141 8 chr2 35894752 35895007 -214792847 + AluJb SINE Alu 1 289 -13 398 345 77 45 chr2 35895112 35895674 -214792180 + L3 LINE CR1 427 1006 -571 377 186 39 54 chr2 35895681 35895810 -214792044 - Charlie5 DNA MER1_type -134 2478 2352 1481 135 239 24 chr2 35895910 35896244 -214791610 + MSTA LTR MaLR 1 406 -22 552 208 69 52 chr2 35896255 35896486 -214791368 - L1MA9 LINE L1 -176 6136 5902 21 0 0 0 chr2 35896488 35896509 -214791345 + AT_rich Low_complexity Low_complexity 1 21 0 247 380 141 16 chr2 35896515 35896955 -214790899 + L3 LINE CR1 980 1474 -103 259 307 57 0 chr2 35897179 35897267 -214790587 + L2 LINE L2 3221 3313 0 403 249 160 6 chr2 35897573 35897754 -214790100 + L1MEd LINE L1 947 1155 -4964 476 45 15 0 chr2 35898009 35898076 -214789778 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 287 170 38 0 chr2 35898076 35898129 -214789725 - L1MA9 LINE L1 -53 6259 6205 237 65 0 0 chr2 35898197 35898228 -214789626 + (TG)n Simple_repeat Simple_repeat 2 32 0 514 395 40 5 chr2 35899219 35899622 -214788232 + ERVL LTR ERVL 4521 4937 -827 753 348 26 19 chr2 35900189 35900499 -214787355 + LTR16A LTR ERVL 123 434 -16 1988 266 50 30 chr2 35900676 35901429 -214786425 + L1ME1 LINE L1 5127 5896 -270 13603 149 27 12 chr2 35901429 35903807 -214784047 - Tigger1 DNA MER2_type 0 2418 5 1988 266 50 30 chr2 35903807 35903986 -214783868 + L1ME1 LINE L1 5896 6070 -96 46 0 0 0 chr2 35904047 35904093 -214783761 + AT_rich Low_complexity Low_complexity 1 46 0 213 233 0 0 chr2 35904112 35904155 -214783699 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 929 152 104 135 chr2 35905410 35905707 -214782147 + AluJo SINE Alu 1 288 -14 2227 81 20 0 chr2 35906006 35906301 -214781553 + AluY SINE Alu 1 301 -10 1985 167 26 5 chr2 35907643 35908020 -214779834 + L1MA6 LINE L1 5916 6300 0 602 95 0 5 chr2 35908665 35908676 -214779178 + L1P4 LINE L1 5383 5393 -772 3838 126 32 3 chr2 35908676 35908976 -214778878 - L1PA15 LINE L1 -6 6159 5869 2176 52 0 4 chr2 35908976 35909247 -214778607 + AluY SINE Alu 37 306 -5 3838 126 32 3 chr2 35909247 35909563 -214778291 - L1PA15 LINE L1 -296 5869 5525 602 95 0 5 chr2 35909563 35909650 -214778204 + L1P4 LINE L1 5393 5477 -688 1467 207 97 0 chr2 35910849 35911158 -214776696 + MER7A DNA MER2_type 10 346 0 21 36 0 0 chr2 35911293 35911321 -214776533 + AT_rich Low_complexity Low_complexity 1 28 0 1300 267 71 58 chr2 35911827 35912221 -214775633 + L1MC4a LINE L1 4901 4801 -1345 2281 107 3 0 chr2 35912221 35912529 -214775325 + AluSx SINE Alu 1 309 -3 1300 267 71 58 chr2 35912529 35913059 -214774795 + L1MC4a LINE L1 4800 5322 -824 1365 294 85 41 chr2 35913169 35913758 -214774096 + MER50 LTR ERV1 26 640 -94 836 259 137 31 chr2 35913836 35914391 -214773463 + L1MC4a LINE L1 5854 6467 -1341 6336 191 26 19 chr2 35915662 35917965 -214769889 - L1PB4 LINE L1 -4 7214 4895 666 255 48 76 chr2 35917990 35918425 -214769429 - L1PB4 LINE L1 -4876 2333 1911 450 332 93 42 chr2 35918459 35919109 -214768745 - L1PB4 LINE L1 -5258 1951 1 192 125 47 31 chr2 35919142 35919206 -214768648 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 2816 60 2 3 chr2 35919334 35919846 -214768008 - L1P2 LINE L1 -631 5524 5015 797 88 0 26 chr2 35919830 35919944 -214767910 + L1P2 LINE L1 4911 5021 -1125 * 978 282 65 17 chr2 35919942 35920407 -214767447 + L1MC2 LINE L1 3585 4071 -2075 470 285 42 0 chr2 35920410 35920575 -214767279 + L1MC2 LINE L1 4109 4280 -1866 1352 246 39 62 chr2 35920722 35921238 -214766616 + L1MC2 LINE L1 4845 5348 -798 9303 117 53 3 chr2 35921338 35922769 -214765085 - THE1B-int LTR MaLR -78 1502 1 385 82 0 0 chr2 35922771 35922820 -214765034 - THE1B LTR MaLR -2 362 314 729 256 6 0 chr2 35922821 35922989 -214764865 + L1MC2 LINE L1 5677 5845 -499 823 184 14 48 chr2 35922991 35923198 -214764656 + L1MC2 LINE L1 6134 6333 -11 26 50 0 0 chr2 35923337 35923377 -214764477 + AT_rich Low_complexity Low_complexity 1 40 0 265 197 0 42 chr2 35923518 35923589 -214764265 + (TA)n Simple_repeat Simple_repeat 1 68 0 494 354 92 0 chr2 35923703 35923943 -214763911 - MIR SINE MIR 0 262 1 271 347 111 31 chr2 35925256 35925544 -214762310 + L2 LINE L2 1357 1667 -1647 536 255 58 82 chr2 35925727 35926293 -214761561 + L1ME3A LINE L1 5011 5565 -601 1964 194 8 0 chr2 35926307 35926688 -214761166 - L1PA16 LINE L1 0 6166 5783 195 49 73 0 chr2 35926689 35926730 -214761124 + (TA)n Simple_repeat Simple_repeat 1 44 0 382 138 0 0 chr2 35926734 35926799 -214761055 - L1PA16 LINE L1 -380 5788 5724 326 280 112 11 chr2 35926911 35927110 -214760744 + L1ME3A LINE L1 5727 5945 -217 188 304 0 0 chr2 35927742 35927788 -214760066 - MIR SINE MIR -111 151 106 2095 302 130 37 chr2 35927954 35929522 -214758332 - L2 LINE L2 0 3313 1557 1061 197 5 0 chr2 35929799 35929987 -214757867 - MLT1B LTR MaLR 0 390 202 1410 204 86 10 chr2 35930310 35930623 -214757231 - MLT1A1 LTR MaLR 0 365 29 3340 93 10 18 chr2 35930623 35931118 -214756736 + L1PA13 LINE L1 5671 6161 -2 2397 53 0 43 chr2 35933145 35933468 -214754386 - AluY SINE Alu -2 309 1 392 278 110 38 chr2 35935303 35935512 -214752342 - LTR41 LTR ERVL -1 772 549 521 282 39 11 chr2 35935668 35935849 -214752005 - LTR41 LTR ERVL -586 187 2 189 297 27 27 chr2 35936403 35936477 -214751377 + MIR SINE MIR 32 105 -157 374 302 147 41 chr2 35936805 35937146 -214750708 - L1ME3 LINE L1 -300 5931 5551 7452 35 0 3 chr2 35937172 35938361 -214749493 + L1PA4 LINE L1 4970 6155 0 315 236 16 98 chr2 35938413 35938536 -214749318 - L1ME3 LINE L1 -962 5466 5354 368 300 97 24 chr2 35938856 35939279 -214748575 - L1ME3 LINE L1 -1301 4914 4461 2090 153 8 16 chr2 35939607 35939985 -214747869 + THE1C LTR MaLR 1 375 0 350 312 52 13 chr2 35940237 35940391 -214747463 - L1ME3 LINE L1 -6114 282 123 695 248 57 27 chr2 35940725 35941056 -214746798 + L1M4 LINE L1 2203 2543 -3603 591 236 88 73 chr2 35941069 35941327 -214746527 + MLT1E2 LTR MaLR 4 242 -263 1226 271 48 28 chr2 35941342 35941740 -214746114 + MLT1E2 LTR MaLR 221 626 0 2409 246 128 46 chr2 35941748 35943223 -214744631 + L1M4 LINE L1 2558 4153 -1993 242 174 22 0 chr2 35943224 35943270 -214744584 + Alu SINE Alu 120 166 -136 1849 182 16 148 chr2 35943270 35943912 -214743942 + LTR6A LTR ERV1 1 563 -1 1942 108 0 37 chr2 35943912 35944207 -214743647 + AluSx SINE Alu 27 310 -2 1450 269 108 21 chr2 35944214 35945036 -214742818 + L1M4 LINE L1 4143 5036 -1110 1963 151 35 12 chr2 35945057 35945379 -214742475 - THE1B LTR MaLR 0 364 32 218 56 28 0 chr2 35945379 35945415 -214742439 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 1963 151 35 12 chr2 35945415 35945436 -214742418 - THE1B LTR MaLR -332 32 13 811 203 46 10 chr2 35945436 35945488 -214742366 + L1M4 LINE L1 5087 5136 -1028 2077 88 7 14 chr2 35945488 35945785 -214742069 + AluSc SINE Alu 1 295 -14 811 203 46 10 chr2 35945785 35946059 -214741795 + L1M4 LINE L1 5136 5426 -738 1041 264 106 10 chr2 35946061 35946542 -214741312 + L1M4 LINE L1 3886 4412 -1734 229 293 9 94 chr2 35946877 35946983 -214740871 + L2 LINE L2 3195 3291 -22 21 0 0 0 chr2 35947112 35947133 -214740721 + AT_rich Low_complexity Low_complexity 1 21 0 234 149 0 45 chr2 35947171 35947238 -214740616 + (TA)n Simple_repeat Simple_repeat 1 64 0 24 32 0 0 chr2 35947829 35947860 -214739994 + AT_rich Low_complexity Low_complexity 1 31 0 429 279 144 14 chr2 35947864 35948079 -214739775 + HAL1b LINE L1 1099 1341 -7 1459 236 44 16 chr2 35948702 35949105 -214738749 - MLT1D LTR MaLR 0 593 90 768 183 53 140 chr2 35949234 35949519 -214738335 - MLT1D-int LTR MaLR 0 1371 1112 24 85 0 0 chr2 35950118 35950177 -214737677 + AT_rich Low_complexity Low_complexity 1 59 0 206 174 22 0 chr2 35951585 35951631 -214736223 + (TA)n Simple_repeat Simple_repeat 1 47 0 2249 192 75 0 chr2 35953454 35953949 -214733905 - L1MA10 LINE L1 -10 6324 5793 226 302 0 0 chr2 35953995 35954058 -214733796 - Charlie2b DNA MER1_type -1476 1306 1244 303 216 24 24 chr2 35954074 35954199 -214733655 + (TA)n Simple_repeat Simple_repeat 1 125 0 234 91 0 0 chr2 35954199 35954232 -214733622 + (GA)n Simple_repeat Simple_repeat 2 34 0 410 339 106 34 chr2 35954255 35954642 -214733212 - Charlie2b DNA MER1_type -2278 584 170 22 56 0 0 chr2 35956206 35956242 -214731612 + AT_rich Low_complexity Low_complexity 1 36 0 348 314 163 13 chr2 35957694 35957847 -214730007 + MER5A DNA MER1_type 14 189 0 2323 56 3 13 chr2 35958084 35958386 -214729468 + AluY SINE Alu 1 299 -12 339 233 25 64 chr2 35958428 35958575 -214729279 - Charlie8 DNA MER1_type -2157 260 140 378 224 93 0 chr2 35958979 35959086 -214728768 - MIR SINE MIR -12 250 134 1589 168 39 95 chr2 35959317 35959727 -214728127 - MER39 LTR ERV1 -2 705 319 1967 269 73 53 chr2 35960334 35961881 -214725973 + L1ME3A LINE L1 748 2278 -4128 232 313 54 54 chr2 35962203 35962427 -214725427 - L2 LINE L2 -8 3305 3082 885 322 93 15 chr2 35962515 35962987 -214724867 - L2 LINE L2 -1193 2121 1613 375 318 53 5 chr2 35963094 35963283 -214724571 - LTR67 LTR ERVL 0 557 360 258 232 192 87 chr2 35963700 35964389 -214723465 + L1ME3A LINE L1 4353 5113 -1293 364 275 114 80 chr2 35964411 35964735 -214723119 + L1ME3A LINE L1 5871 6205 -225 787 248 37 63 chr2 35964831 35965101 -214722753 + MLT2B1 LTR ERVL 5 267 -253 24 0 0 0 chr2 35965200 35965224 -214722630 + AT_rich Low_complexity Low_complexity 1 24 0 4888 203 29 12 chr2 35965226 35967293 -214720561 - L1PA16 LINE L1 -9 6157 4060 2187 268 71 4 chr2 35967292 35968090 -214719764 + L1MDb LINE L1 2659 3510 -2896 * 570 241 15 0 chr2 35969427 35969564 -214718290 - MLT2B1 LTR ERVL 0 520 382 192 200 0 0 chr2 35969641 35969691 -214718163 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 24 53 0 0 chr2 35969845 35969883 -214717971 + AT_rich Low_complexity Low_complexity 1 38 0 27 62 0 0 chr2 35970087 35970135 -214717719 + AT_rich Low_complexity Low_complexity 1 48 0 21 71 0 0 chr2 35970484 35970526 -214717328 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 35971196 35971224 -214716630 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr2 35971307 35971339 -214716515 + AT_rich Low_complexity Low_complexity 1 32 0 202 200 0 0 chr2 35971726 35971766 -214716088 + (TG)n Simple_repeat Simple_repeat 2 41 0 207 220 0 0 chr2 35973037 35973087 -214714767 + (TA)n Simple_repeat Simple_repeat 2 51 0 29 0 0 0 chr2 35973205 35973234 -214714620 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 35974384 35974413 -214713441 + AT_rich Low_complexity Low_complexity 1 29 0 312 294 40 16 chr2 35974719 35974845 -214713009 - MER94 DNA DNA -1 133 5 512 316 106 5 chr2 35974847 35975065 -214712789 + MIR SINE MIR 18 257 -5 24 53 0 0 chr2 35975383 35975421 -214712433 + AT_rich Low_complexity Low_complexity 1 38 0 26 50 0 0 chr2 35976109 35976149 -214711705 + AT_rich Low_complexity Low_complexity 1 40 0 303 266 128 9 chr2 35976150 35976259 -214711595 + MIR SINE MIR 103 224 -38 25 0 0 0 chr2 35976472 35976497 -214711357 + AT_rich Low_complexity Low_complexity 1 25 0 319 286 0 0 chr2 35977355 35977467 -214710387 + L1MDb LINE L1 3854 3965 -2441 * 495 281 61 37 chr2 35977448 35977694 -214710160 + L1 LINE L1 4996 5247 -1159 1604 172 4 4 chr2 35977694 35977962 -214709892 + AluSq SINE Alu 32 299 -14 619 215 0 14 chr2 35978006 35978150 -214709704 - L1 LINE L1 -2324 3822 3681 * 6161 102 12 8 chr2 35978140 35979039 -214708815 - L1PA13 LINE L1 -1 6162 5260 3352 231 20 3 chr2 35979043 35979689 -214708165 + L1PA13 LINE L1 2 658 -6129 295 138 11 69 chr2 35979789 35979876 -214707978 + (TTATA)n Simple_repeat Simple_repeat 5 86 0 2795 161 17 9 chr2 35980460 35980926 -214706928 - Tigger3b DNA MER2_type -760 471 2 480 301 68 11 chr2 35981113 35981289 -214706565 + MIR SINE MIR 29 214 -48 474 276 101 68 chr2 35981772 35982316 -214705538 - MLT1F1 LTR MaLR -3 564 3 250 308 146 32 chr2 35983317 35983502 -214704352 + MIR SINE MIR 57 262 0 362 363 32 6 chr2 35983713 35983870 -214703984 - L1MEd LINE L1 -5467 652 492 235 274 11 32 chr2 35984416 35984511 -214703343 + HAL1b LINE L1 748 840 -508 1670 305 147 23 chr2 35984939 35985090 -214702764 - L2 LINE L2 -1 3312 3181 1898 146 17 3 chr2 35985090 35985377 -214702477 + AluSx SINE Alu 1 291 -21 1670 305 147 23 chr2 35985377 35986273 -214701581 - L2 LINE L2 -132 3181 2122 244 363 32 45 chr2 35986270 35986427 -214701427 - L2 LINE L2 -2131 1183 1029 * 2732 167 83 80 chr2 35986429 35987498 -214700356 + LTR12 LTR ERV1 31 580 -134 320 259 118 35 chr2 35987498 35987668 -214700186 - L2 LINE L2 -2281 1033 850 301 234 103 115 chr2 35989672 35989924 -214697930 - MER112 DNA MER1_type -11 249 1 1568 90 43 0 chr2 35990437 35990670 -214697184 + MER75B DNA T2_type 1 243 0 277 316 127 33 chr2 35991013 35991225 -214696629 - LTR67 LTR ERVL -2 555 324 355 132 40 0 chr2 35991381 35991457 -214696397 - L1MA7 LINE L1 0 6291 6213 262 347 21 35 chr2 35991464 35991608 -214696246 - LTR67 LTR ERVL -359 198 57 210 350 67 17 chr2 35991664 35991784 -214696070 + L2 LINE L2 2932 3057 -256 189 0 0 0 chr2 35991870 35991891 -214695963 + (TCCCC)n Simple_repeat Simple_repeat 1 21 0 479 146 0 11 chr2 35991901 35991990 -214695864 + (TTCC)n Simple_repeat Simple_repeat 3 90 0 509 275 128 9 chr2 35993077 35993295 -214694559 + MIR SINE MIR 19 262 0 2312 122 33 33 chr2 35995667 35996093 -214691761 - L1PB1 LINE L1 -1 6150 5725 208 220 0 85 chr2 35996260 35996319 -214691535 + L2 LINE L2 3250 3303 -10 23 0 0 0 chr2 35996374 35996397 -214691457 + AT_rich Low_complexity Low_complexity 1 23 0 183 180 33 98 chr2 35998373 35998434 -214689420 - L2 LINE L2 -78 3235 3179 571 250 91 17 chr2 35998886 35999062 -214688792 + MER4E LTR ERV1 535 723 -43 290 79 0 0 chr2 35999062 35999100 -214688754 + L1PA10 LINE L1 2095 2132 -4014 610 94 0 0 chr2 35999109 35999194 -214688660 + L1PA10 LINE L1 3478 3562 -2584 7630 138 18 14 chr2 35999204 36000482 -214687372 + L1PA10 LINE L1 3771 5053 -1093 1561 120 4 32 chr2 36000482 36000730 -214687124 + L1PA10 LINE L1 5926 6168 0 22 0 0 0 chr2 36000736 36000758 -214687096 + AT_rich Low_complexity Low_complexity 1 22 0 1634 63 10 0 chr2 36001629 36001836 -214686018 + AluSp SINE Alu 93 301 -12 200 307 27 0 chr2 36001946 36002021 -214685833 - MIR SINE MIR -13 249 173 351 224 122 9 chr2 36002059 36002166 -214685688 + L2 LINE L2 3190 3308 -5 321 47 0 0 chr2 36003722 36003765 -214684089 + (CA)n Simple_repeat Simple_repeat 2 44 0 42874 49 4 1 chr2 36006996 36013140 -214674714 + L1PA4 LINE L1 2 6154 -1 2098 275 41 19 chr2 36013963 36014744 -214673110 - L1ME1 LINE L1 -4 6162 5365 364 259 109 6 chr2 36014751 36014925 -214672929 + L1MB1 LINE L1 3346 3537 -2609 210 37 0 0 chr2 36014945 36014972 -214672882 + (CA)n Simple_repeat Simple_repeat 1 27 0 4955 80 5 1 chr2 36015625 36016287 -214671567 - L1PA6 LINE L1 -3 6151 5488 6743 234 60 9 chr2 36016397 36018504 -214669350 + L1PA13 LINE L1 758 2976 -3821 611 226 171 13 chr2 36018500 36018739 -214669115 - L1 LINE L1 -2446 3700 3424 * 1591 228 75 11 chr2 36018737 36019087 -214668767 + L1MB1 LINE L1 3879 4268 -1878 231 114 0 0 chr2 36019087 36019122 -214668732 + (CA)n Simple_repeat Simple_repeat 2 36 0 1591 228 75 11 chr2 36019122 36019241 -214668613 + L1MB1 LINE L1 4268 4378 -1768 * 3994 181 29 35 chr2 36019231 36020035 -214667819 + L1MB1 LINE L1 5106 5907 -261 2305 101 0 0 chr2 36020035 36020333 -214667521 + AluSq SINE Alu 1 298 -15 3994 181 29 35 chr2 36020333 36020594 -214667260 + L1MB1 LINE L1 5907 6168 0 2153 241 51 69 chr2 36020578 36021512 -214666342 + L1ME1 LINE L1 5146 6047 -119 * 2206 92 7 0 chr2 36021512 36021807 -214666047 + AluY SINE Alu 1 297 -14 2153 241 51 69 chr2 36021807 36021920 -214665934 + L1ME1 LINE L1 6047 6161 -5 183 129 0 0 chr2 36022910 36022941 -214664913 + (TTA)n Simple_repeat Simple_repeat 2 32 0 2313 128 8 16 chr2 36023126 36023493 -214664361 + THE1B LTR MaLR 1 364 0 11342 101 12 1 chr2 36023493 36025055 -214662799 + THE1B-int LTR MaLR 1 1580 0 2233 124 5 42 chr2 36025055 36025433 -214662421 + THE1B LTR MaLR 1 364 0 275 359 41 15 chr2 36025445 36025640 -214662214 + L1MEd LINE L1 460 659 -5460 391 282 126 15 chr2 36025712 36025974 -214661880 + L1MEd LINE L1 893 1183 -4936 346 354 132 0 chr2 36026016 36026259 -214661595 + HAL1 LINE L1 1379 1653 -854 558 207 117 5 chr2 36026391 36026579 -214661275 + L1M4 LINE L1 5129 5337 -809 8136 133 7 2 chr2 36026609 36028646 -214659208 - L1PA8A LINE L1 -1 6445 4407 10824 163 14 29 chr2 36028648 36032001 -214655853 - L1PA8A LINE L1 -3101 3360 1 2487 70 0 6 chr2 36032422 36032735 -214655119 + AluY SINE Alu 1 311 0 804 186 0 111 chr2 36033161 36033360 -214654494 - L1PA16 LINE L1 -17 6149 5973 368 183 0 0 chr2 36033360 36033431 -214654423 + Charlie1 DNA MER1_type 2186 2256 -505 21 36 0 0 chr2 36033668 36033696 -214654158 + AT_rich Low_complexity Low_complexity 1 28 0 289 297 80 9 chr2 36033721 36033768 -214654086 - MIR SINE MIR -19 243 201 1678 142 85 3 chr2 36033768 36034098 -214653756 - MER46B DNA MER2_type -4 232 1 289 297 80 9 chr2 36034098 36034226 -214653628 - MIR SINE MIR -61 201 6 283 203 241 0 chr2 36034470 36034549 -214653305 - MER45 DNA AcHobo -58 120 23 353 200 60 30 chr2 36034958 36035058 -214652796 - L1MC4 LINE L1 -12 8030 7928 216 0 0 0 chr2 36035152 36035176 -214652678 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1956 97 61 21 chr2 36035193 36035472 -214652382 - AluSg SINE Alu -20 290 1 282 288 131 50 chr2 36035673 36035895 -214651959 + MIR SINE MIR 8 247 -15 3485 126 26 0 chr2 36036823 36037361 -214650493 - L1P3 LINE L1 -5323 552 1 1779 125 0 8 chr2 36037784 36038048 -214649806 + AluY SINE Alu 3 264 -47 1813 247 65 66 chr2 36040100 36041226 -214646628 - L1M4c LINE L1 -3998 2565 1296 24 0 0 0 chr2 36041579 36041603 -214646251 + AT_rich Low_complexity Low_complexity 1 24 0 715 237 30 10 chr2 36042631 36042829 -214645025 + MSTA LTR MaLR 227 428 0 1951 261 57 7 chr2 36042845 36043587 -214644267 - L1MEc LINE L1 -2652 3563 2785 700 302 97 36 chr2 36043583 36044080 -214643774 - L1MEc LINE L1 -5531 865 339 * 207 0 0 0 chr2 36044257 36044280 -214643574 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2378 71 3 3 chr2 36044284 36044579 -214643275 - AluY SINE Alu -16 295 1 601 289 93 34 chr2 36044701 36045211 -214642643 + L1ME3A LINE L1 5366 5940 -230 294 254 67 75 chr2 36045527 36045767 -214642087 + L1MEc LINE L1 1393 1630 -4766 1393 191 82 11 chr2 36045787 36046054 -214641800 + L1PA15 LINE L1 4 289 -6498 1332 197 27 7 chr2 36046079 36046373 -214641481 + L1PA15 LINE L1 2192 2491 -4306 15649 32 0 0 chr2 36046373 36049007 -214638847 - L1PA4 LINE L1 0 6155 3521 9464 44 3 0 chr2 36049008 36050210 -214637644 + L1PA4 LINE L1 2303 3508 -2638 * 16504 209 15 8 chr2 36050206 36054219 -214633635 + L1PA15 LINE L1 2476 6514 -302 2236 128 3 3 chr2 36054415 36054766 -214633088 + L1PA13 LINE L1 5794 6144 -19 27 29 0 0 chr2 36054767 36054801 -214633053 + AT_rich Low_complexity Low_complexity 1 34 0 2536 281 66 35 chr2 36054855 36057050 -214630804 + L1MEc LINE L1 1693 4092 -2123 1178 149 13 53 chr2 36057052 36057280 -214630574 + THE1C LTR MaLR 157 375 0 921 201 13 27 chr2 36057390 36057614 -214630240 - L1PB4 LINE L1 -7 6149 5929 310 325 114 23 chr2 36057626 36057810 -214630044 + MIR SINE MIR 16 218 -44 547 113 0 0 chr2 36057810 36057890 -214629964 - MADE1 DNA Mariner 0 80 1 310 325 114 23 chr2 36057890 36057920 -214629934 + MIR SINE MIR 218 244 -18 23 54 0 0 chr2 36058003 36058040 -214629814 + AT_rich Low_complexity Low_complexity 1 37 0 716 142 8 17 chr2 36060358 36060478 -214627376 - THE1C LTR MaLR -1 374 256 478 160 53 114 chr2 36060498 36060629 -214627225 - THE1C LTR MaLR -252 123 1 3731 120 9 2 chr2 36060629 36061170 -214626684 - THE1C-int LTR MaLR 0 1580 1036 5681 133 51 63 chr2 36061557 36062616 -214625238 - THE1C-int LTR MaLR -534 1046 1 662 152 9 0 chr2 36062616 36062721 -214625133 - THE1C LTR MaLR 0 375 270 450 0 0 0 chr2 36063429 36063479 -214624375 + (TA)n Simple_repeat Simple_repeat 1 50 0 1638 178 3 11 chr2 36063569 36063856 -214623998 - AluJo SINE Alu -23 289 5 222 150 0 0 chr2 36064876 36064916 -214622938 + (TC)n Simple_repeat Simple_repeat 2 41 0 234 62 0 0 chr2 36064919 36064951 -214622903 + (CA)n Simple_repeat Simple_repeat 2 33 0 2034 217 85 79 chr2 36066472 36067293 -214620561 + LTR1B LTR ERV1 1 826 0 180 152 0 0 chr2 36067638 36067671 -214620183 + A-rich Low_complexity Low_complexity 1 33 0 2086 133 130 11 chr2 36068016 36068392 -214619462 - MSTA LTR MaLR -7 421 1 1618 239 109 66 chr2 36068970 36069808 -214618046 + L1MC4 LINE L1 7023 7896 -146 363 137 0 0 chr2 36069840 36069913 -214617941 + (TG)n Simple_repeat Simple_repeat 1 73 0 21 36 0 0 chr2 36070018 36070046 -214617808 + AT_rich Low_complexity Low_complexity 1 28 0 1339 229 6 19 chr2 36070122 36070436 -214617418 + AluJb SINE Alu 1 310 -2 1852 133 0 4 chr2 36071331 36071595 -214616259 - AluSc SINE Alu -8 301 39 2021 223 20 17 chr2 36072023 36072607 -214615247 - L1P LINE L1 -2751 3395 2810 278 335 68 11 chr2 36072774 36072965 -214614889 + L2 LINE L2 2430 2631 -683 247 285 31 54 chr2 36073639 36073769 -214614085 - MLT1H LTR MaLR -17 532 406 25 0 0 0 chr2 36074598 36074623 -214613231 + AT_rich Low_complexity Low_complexity 1 25 0 207 85 64 0 chr2 36074843 36074890 -214612964 + (TA)n Simple_repeat Simple_repeat 2 51 0 318 296 23 0 chr2 36074951 36075039 -214612815 - L1MC4 LINE L1 -1339 6703 6614 23 0 0 0 chr2 36075349 36075372 -214612482 + AT_rich Low_complexity Low_complexity 1 23 0 287 398 79 11 chr2 36075372 36075651 -214612203 - L3 LINE CR1 -230 1347 1050 929 272 26 13 chr2 36075749 36076062 -214611792 - L1ME2 LINE L1 -11 6948 6632 998 68 0 0 chr2 36076075 36076207 -214611647 - L1PA8 LINE L1 0 6172 6041 1821 116 0 4 chr2 36076208 36076485 -214611369 + L1P LINE L1 4595 4870 -1276 475 212 36 15 chr2 36076495 36076632 -214611222 - L1ME2 LINE L1 -347 6612 6473 877 271 23 62 chr2 36076767 36077082 -214610772 - L1ME2 LINE L1 -505 6454 6153 230 254 152 35 chr2 36077199 36077396 -214610458 - L1ME2 LINE L1 -991 5950 5731 253 137 0 20 chr2 36077425 36077476 -214610378 - LTR66 LTR ERVL -172 438 389 343 251 86 34 chr2 36077496 36077671 -214610183 - L1ME2 LINE L1 -1219 5722 5539 * 685 291 38 40 chr2 36077665 36078085 -214609769 - L1ME2 LINE L1 -4579 2543 2125 253 259 30 38 chr2 36078109 36078240 -214609614 - L1ME2 LINE L1 -4960 1879 1750 455 293 62 36 chr2 36078405 36078709 -214609145 - L1ME2 LINE L1 -4934 1489 1178 227 333 29 29 chr2 36079237 36079408 -214608446 - L1ME2 LINE L1 -6226 197 27 11133 224 50 32 chr2 36080553 36083708 -214604146 - L1MA6 LINE L1 0 6942 3846 1934 127 31 3 chr2 36083708 36084000 -214603854 - AluSx SINE Alu -12 300 1 11133 224 50 32 chr2 36084000 36086205 -214601649 - L1MA6 LINE L1 -3096 3846 1774 2025 114 35 7 chr2 36086205 36086494 -214601360 + AluSq SINE Alu 3 299 -14 11133 224 50 32 chr2 36086494 36087153 -214600701 - L1MA6 LINE L1 -5168 1774 1129 1533 323 65 40 chr2 36087122 36087862 -214599992 - L1MA6 LINE L1 -6021 768 11 * 331 338 5 28 chr2 36087898 36088111 -214599743 - L1M4 LINE L1 -4865 1677 1470 1250 299 89 20 chr2 36088257 36089284 -214598570 - L1M4 LINE L1 -886 5260 4164 472 257 78 69 chr2 36089349 36089668 -214598186 - L1M4 LINE L1 -2347 3799 3478 399 304 137 60 chr2 36089671 36090224 -214597630 - L1MEc LINE L1 -5060 1336 741 1398 294 66 36 chr2 36092549 36093535 -214594319 + L1MEc LINE L1 400 1414 -4982 912 269 145 30 chr2 36093670 36094537 -214593317 + L1M4 LINE L1 4143 5109 -1037 267 273 20 10 chr2 36095288 36095387 -214592467 + MLT1I LTR MaLR 307 406 -3 419 359 137 0 chr2 36095507 36095850 -214592004 + L1M4 LINE L1 3724 4113 -2033 204 333 0 0 chr2 36096309 36096360 -214591494 + polypyrimidine Low_complexity Low_complexity 4 54 0 186 188 14 29 chr2 36097088 36097157 -214590697 + (TA)n Simple_repeat Simple_repeat 2 69 0 248 318 64 0 chr2 36097320 36097430 -214590424 + MER58A DNA MER1_type 1 0 -107 1214 211 79 16 chr2 36099271 36099733 -214588121 - Tigger7 DNA MER2_type 0 2587 25 348 211 21 0 chr2 36099963 36100058 -214587796 - L1MB7 LINE L1 -1 6183 6087 237 86 0 0 chr2 36100070 36100105 -214587749 - MLT2B3 LTR ERVL -6 509 475 539 112 0 35 chr2 36100105 36100221 -214587633 + (GGAA)n Simple_repeat Simple_repeat 3 114 0 1818 185 34 50 chr2 36100222 36100605 -214587249 - MLT2B3 LTR ERVL -173 381 5 704 215 22 53 chr2 36100612 36100840 -214587014 - L1MB8 LINE L1 -100 6078 5858 6017 212 121 26 chr2 36100863 36102401 -214585453 - MER52A LTR ERV1 0 1755 1 1973 139 29 42 chr2 36102467 36102847 -214585007 - THE1C LTR MaLR 0 375 1 360 313 43 0 chr2 36102965 36103080 -214584774 + HERVL LTR ERVL 4790 4909 -745 394 282 27 75 chr2 36103107 36103295 -214584559 + MLT2E LTR ERVL 202 380 -248 21 71 0 0 chr2 36104144 36104186 -214583668 + AT_rich Low_complexity Low_complexity 1 42 0 356 266 133 26 chr2 36104658 36104891 -214582963 - MER5C DNA MER1_type -49 275 18 38 39 0 0 chr2 36104970 36105022 -214582832 + AT_rich Low_complexity Low_complexity 1 52 0 1349 233 0 7 chr2 36105041 36105320 -214582534 - AluJo SINE Alu -35 277 1 335 316 93 60 chr2 36105353 36105739 -214582115 - L1ME3A LINE L1 -36 6203 5805 1472 286 109 21 chr2 36105798 36106365 -214581489 - MLT1E2 LTR MaLR -7 619 3 237 304 13 0 chr2 36106370 36106449 -214581405 - L1ME3A LINE L1 -558 5681 5602 1692 175 52 30 chr2 36106449 36106814 -214581040 + THE1C LTR MaLR 1 373 -2 6489 140 232 19 chr2 36106820 36108119 -214579735 + THE1C-int LTR MaLR 5 1580 0 1596 194 67 28 chr2 36108119 36108480 -214579374 + THE1C LTR MaLR 1 375 0 324 303 33 0 chr2 36108541 36108663 -214579191 - L1ME3A LINE L1 -687 5544 5419 681 273 143 52 chr2 36108690 36109291 -214578563 - L1ME3A LINE L1 -1174 5041 4386 25 0 0 0 chr2 36109497 36109522 -214578332 + AT_rich Low_complexity Low_complexity 1 25 0 1805 280 73 25 chr2 36109543 36110910 -214576944 - L1MEc LINE L1 -2695 3520 2118 304 264 0 11 chr2 36110925 36111012 -214576842 - L1MEc LINE L1 -6266 130 45 26 30 0 0 chr2 36111652 36111685 -214576169 + AT_rich Low_complexity Low_complexity 1 33 0 287 229 0 60 chr2 36112259 36112342 -214575512 - L2 LINE L2 -9 3304 3227 789 254 80 57 chr2 36113692 36114145 -214573709 + MLT1C LTR MaLR 1 463 -4 435 298 36 60 chr2 36114264 36114512 -214573342 + HAL1 LINE L1 810 1051 -1456 2644 196 26 16 chr2 36114517 36115094 -214572760 + L1MA7 LINE L1 5577 6159 -132 330 285 136 58 chr2 36115366 36115868 -214571986 + HAL1 LINE L1 1398 1938 -569 2045 259 101 40 chr2 36116051 36118058 -214569796 - L1MD1 LINE L1 -9 6233 4084 322 259 65 50 chr2 36118058 36118197 -214569657 - L1MD1 LINE L1 -3765 2381 2241 688 279 40 7 chr2 36118197 36118473 -214569381 - L1M4 LINE L1 -2073 4775 4491 408 20 0 0 chr2 36118476 36118525 -214569329 + (CA)n Simple_repeat Simple_repeat 2 50 0 231 103 0 0 chr2 36118527 36118566 -214569288 + (GA)n Simple_repeat Simple_repeat 1 39 0 5715 240 25 34 chr2 36118597 36119115 -214568739 - L1M4 LINE L1 -3906 2942 2421 2257 101 0 0 chr2 36119115 36119411 -214568443 + AluY SINE Alu 1 296 -15 5715 240 25 34 chr2 36119411 36120660 -214567194 - L1M4 LINE L1 -4427 2421 1192 445 163 20 14 chr2 36120672 36120819 -214567035 + (TA)n Simple_repeat Simple_repeat 1 148 0 5764 237 62 3 chr2 36120824 36122521 -214565333 + L1 LINE L1 2330 4125 -2021 10972 210 32 54 chr2 36122526 36122975 -214564879 - L1 LINE L1 -1144 5002 4545 1905 137 7 0 chr2 36122975 36123253 -214564601 - AluSx SINE Alu -32 280 1 10972 210 32 54 chr2 36123253 36123267 -214564587 - L1 LINE L1 -1601 4545 4532 744 11 0 0 chr2 36123267 36123356 -214564498 - AluY SINE Alu -10 301 213 10972 210 32 54 chr2 36123356 36126205 -214561649 - L1 LINE L1 -1614 4532 1664 3463 153 15 5 chr2 36126208 36126987 -214560867 + L1PB1 LINE L1 5010 5791 -360 361 110 86 0 chr2 36126987 36127150 -214560704 + (TA)n Simple_repeat Simple_repeat 1 177 0 2411 123 6 6 chr2 36127150 36127515 -214560339 + L1PB1 LINE L1 5781 6145 -6 3824 219 34 7 chr2 36127558 36128504 -214559350 + L1 LINE L1 4114 5084 -1062 587 214 8 0 chr2 36128528 36128645 -214559209 - MSTB1 LTR MaLR 0 432 315 22 56 0 0 chr2 36129503 36129539 -214558315 + AT_rich Low_complexity Low_complexity 1 36 0 187 273 0 0 chr2 36130162 36130206 -214557648 + MIR SINE MIR 101 144 -64 1007 175 0 6 chr2 36130893 36131059 -214556795 - AluJb SINE Alu -21 291 127 235 91 0 0 chr2 36131059 36131092 -214556762 + Alu SINE Alu 65 97 -205 2027 125 7 10 chr2 36131441 36131738 -214556116 + AluSx SINE Alu 1 296 -16 216 0 0 0 chr2 36132176 36132200 -214555654 + (TG)n Simple_repeat Simple_repeat 2 25 0 3042 253 72 25 chr2 36132251 36133875 -214553979 + L1MDa LINE L1 18 1936 -4604 14706 212 32 42 chr2 36133897 36139357 -214548497 + L1PA16 LINE L1 1 5336 -1533 1332 77 25 20 chr2 36139357 36139553 -214548301 - L1PA14 LINE L1 -5 6156 5960 14706 212 32 42 chr2 36139553 36140807 -214547047 + L1PA16 LINE L1 5336 6602 -267 325 285 96 0 chr2 36140829 36141001 -214546853 - L1MC/D LINE L1 -600 5562 5485 1403 138 12 16 chr2 36141024 36141271 -214546583 + L1PA16 LINE L1 5920 6165 -1 828 161 52 16 chr2 36141272 36141464 -214546390 + L1MDa LINE L1 1953 2151 -4389 633 259 68 36 chr2 36141447 36141698 -214546156 + L1ME1 LINE L1 4519 4777 -1369 * 704 262 169 22 chr2 36141850 36142374 -214545480 + L1ME1 LINE L1 5297 6075 -91 26 30 0 0 chr2 36142631 36142664 -214545190 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr2 36145580 36145604 -214542250 + AT_rich Low_complexity Low_complexity 1 24 0 367 326 124 5 chr2 36145878 36146096 -214541758 + LTR33A LTR ERVL 5 248 -275 2143 134 27 24 chr2 36146203 36146577 -214541277 - THE1C LTR MaLR 0 375 1 1126 221 38 4 chr2 36146883 36147150 -214540704 - L1MB8 LINE L1 -297 5881 5606 264 352 29 29 chr2 36147312 36147536 -214540318 + ERVL LTR ERVL 2949 3172 -2482 268 315 141 7 chr2 36147733 36147882 -214539972 + ERVL LTR ERVL 3321 3489 -2275 301 301 49 115 chr2 36149518 36149744 -214538110 + L1MD2 LINE L1 785 995 -5545 1151 238 52 13 chr2 36149857 36150240 -214537614 + L1MD2 LINE L1 979 1376 -5167 1061 260 47 51 chr2 36150233 36150511 -214537343 + L1MD2 LINE L1 4768 5046 -1707 * 2235 94 0 0 chr2 36150511 36150846 -214537008 + AluY SINE Alu 2 336 0 1061 260 47 51 chr2 36150846 36152324 -214535530 + L1MD2 LINE L1 5046 6731 -22 28 48 0 0 chr2 36152785 36152827 -214535027 + AT_rich Low_complexity Low_complexity 1 42 0 1533 292 51 19 chr2 36152909 36153548 -214534306 + L2 LINE L2 2439 3095 -218 294 215 41 8 chr2 36154090 36154211 -214533643 + (CATATA)n Simple_repeat Simple_repeat 2 126 0 5031 57 28 0 chr2 36154351 36155004 -214532850 + L1PA7 LINE L1 5484 6154 0 27 0 0 0 chr2 36155227 36155254 -214532600 + AT_rich Low_complexity Low_complexity 1 27 0 328 299 93 41 chr2 36155352 36155696 -214532158 + L1ME4a LINE L1 5563 5924 -197 7121 163 29 17 chr2 36156035 36158303 -214529551 + L1MA8 LINE L1 3997 6287 -4 206 355 65 39 chr2 36158934 36159089 -214528765 + MIR SINE MIR 81 239 -23 342 0 0 0 chr2 36159862 36159900 -214527954 + (CA)n Simple_repeat Simple_repeat 2 39 0 847 123 0 0 chr2 36160363 36160493 -214527361 - L1P5 LINE L1 -685 5466 5337 3914 110 3 2 chr2 36160493 36161064 -214526790 + L1PB1 LINE L1 5576 6148 -3 319 210 60 20 chr2 36161461 36161561 -214526293 - L1ME4a LINE L1 -249 5872 5769 24 32 0 0 chr2 36161795 36161826 -214526028 + AT_rich Low_complexity Low_complexity 1 31 0 278 182 13 52 chr2 36161826 36161903 -214525951 - L1M2 LINE L1 -856 5441 5368 1918 179 28 3 chr2 36161915 36162267 -214525587 - MLT1A1 LTR MaLR 0 365 5 33 43 0 0 chr2 36162585 36162632 -214525222 + AT_rich Low_complexity Low_complexity 1 47 0 396 226 80 36 chr2 36162758 36162895 -214524959 - MER103 DNA DNA -10 156 14 197 328 8 118 chr2 36163027 36163146 -214524708 + MIR SINE MIR 49 154 -108 25 0 0 0 chr2 36163222 36163247 -214524607 + AT_rich Low_complexity Low_complexity 1 25 0 24 67 0 0 chr2 36163462 36163507 -214524347 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr2 36165253 36165274 -214522580 + AT_rich Low_complexity Low_complexity 1 21 0 29 70 0 0 chr2 36165340 36165397 -214522457 + AT_rich Low_complexity Low_complexity 1 57 0 1058 50 7 0 chr2 36165756 36165895 -214521959 - L1P LINE L1 -3781 2365 2226 1504 91 5 0 chr2 36166418 36166626 -214521228 - L1PA11 LINE L1 0 6174 5966 253 306 0 59 chr2 36167016 36167135 -214520719 - MIR SINE MIR -70 138 45 182 319 127 66 chr2 36169524 36169737 -214518117 + L2 LINE L2 2256 2481 -833 321 296 73 95 chr2 36169887 36170353 -214517501 + L1ME4a LINE L1 5316 5764 -357 2306 86 0 0 chr2 36170353 36170643 -214517211 + AluY SINE Alu 1 290 -21 321 296 73 95 chr2 36170643 36170849 -214517005 + L1ME4a LINE L1 5764 5973 -148 337 319 70 13 chr2 36172136 36172293 -214515561 - MIR SINE MIR -44 218 53 2091 252 51 46 chr2 36172514 36173281 -214514573 + L1MD1 LINE L1 5452 6222 -20 2386 86 0 0 chr2 36173289 36173590 -214514264 - AluY SINE Alu -10 301 1 208 135 0 0 chr2 36173771 36173808 -214514046 + (A)n Simple_repeat Simple_repeat 1 37 0 31413 40 1 1 chr2 36173973 36180122 -214507732 - L1PA3 LINE L1 -11 6144 3 6267 220 53 10 chr2 36180133 36181866 -214505988 + L1 LINE L1 2906 4713 -1433 19037 172 39 14 chr2 36181868 36185587 -214502267 + L1M1 LINE L1 17 3832 -3733 5423 199 30 52 chr2 36185582 36186278 -214501576 + L1M1 LINE L1 4401 5110 -2455 * 213 39 0 0 chr2 36186278 36186304 -214501550 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5423 199 30 52 chr2 36186304 36186507 -214501347 + L1M1 LINE L1 5110 5316 -2249 1782 130 10 81 chr2 36186507 36186815 -214501039 + AluSx SINE Alu 1 286 -26 5423 199 30 52 chr2 36186815 36187429 -214500425 + L1M1 LINE L1 5316 5883 -1682 2148 196 45 16 chr2 36187421 36188275 -214499579 + L1M1 LINE L1 6249 7121 -598 * 498 115 26 0 chr2 36188404 36188482 -214499372 - MADE1 DNA Mariner 0 80 1 195 219 0 0 chr2 36188546 36188587 -214499267 + L3 LINE CR1 1523 1563 -14 * 237 349 0 38 chr2 36188582 36188688 -214499166 - MIR3 SINE MIR -96 112 11 313 256 117 7 chr2 36189131 36189268 -214498586 - MER103 DNA DNA -13 153 2 335 377 15 0 chr2 36189630 36189760 -214498094 + L2 LINE L2 3141 3272 0 22 25 0 25 chr2 36191288 36191309 -214496545 + AT_rich Low_complexity Low_complexity 1 22 -17 772 282 10 10 chr2 36191309 36191610 -214496244 - AluY SINE Alu 0 301 1 22 25 0 25 chr2 36191610 36191628 -214496226 + AT_rich Low_complexity Low_complexity 22 39 0 5454 218 2 0 chr2 36192175 36193326 -214494528 - L1P LINE L1 -943 5203 4051 2363 190 73 2 chr2 36193327 36193833 -214494021 - L1MA9 LINE L1 -139 6173 5632 780 278 65 51 chr2 36193886 36194318 -214493536 - L1MD2 LINE L1 -3 6356 5919 2214 190 39 2 chr2 36194402 36194813 -214493041 - MSTB LTR MaLR 0 426 1 21 0 0 0 chr2 36194947 36194968 -214492886 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 36195113 36195141 -214492713 + AT_rich Low_complexity Low_complexity 1 28 0 2676 106 0 0 chr2 36195836 36196195 -214491659 + THE1B LTR MaLR 1 359 -5 2793 216 60 20 chr2 36196195 36197339 -214490515 - L1MD2 LINE L1 -743 5403 4411 2490 64 0 0 chr2 36197339 36197635 -214490219 - AluY SINE Alu -15 296 1 2793 216 60 20 chr2 36197635 36197699 -214490155 - L1MD2 LINE L1 -1735 4411 4351 539 311 0 12 chr2 36197710 36197871 -214489983 - MLT1C LTR MaLR 0 467 309 1860 277 26 9 chr2 36197887 36198580 -214489274 - L1MD2 LINE L1 -2771 3375 2671 1217 143 18 6 chr2 36198594 36198856 -214488998 + Tigger4(Zombi) DNA MER2_type 1 2647 -84 820 221 23 0 chr2 36199170 36199342 -214488512 + MER58A DNA MER1_type 47 222 -2 189 271 29 29 chr2 36199355 36199425 -214488429 - L2 LINE L2 -665 2649 2580 2079 170 44 34 chr2 36199611 36200158 -214487696 - MLT2A2 LTR ERVL 0 554 1 36 82 0 0 chr2 36200588 36200673 -214487181 + AT_rich Low_complexity Low_complexity 1 85 0 41 0 0 0 chr2 36200740 36200781 -214487073 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 36200845 36200867 -214486987 + AT_rich Low_complexity Low_complexity 1 22 0 389 305 108 14 chr2 36201058 36201281 -214486573 + MIR SINE MIR 5 248 -14 368 279 16 0 chr2 36201605 36201734 -214486120 + MER94 DNA DNA 4 134 0 326 257 29 0 chr2 36202329 36202399 -214485455 - L2 LINE L2 -3 3269 3198 1516 219 53 29 chr2 36202978 36203434 -214484420 - MLT1C LTR MaLR 0 467 1 242 0 0 0 chr2 36204117 36204144 -214483710 - L1P LINE L1 -5540 606 580 228 209 0 0 chr2 36205288 36205331 -214482523 - L1MC/D LINE L1 -605 5728 5686 547 233 114 11 chr2 36205379 36205555 -214482299 - L1ME LINE L1 -379 5791 5598 2604 256 57 50 chr2 36206417 36207840 -214480014 - L1ME LINE L1 -2266 3880 2448 391 206 160 15 chr2 36207840 36207971 -214479883 + MER74C LTR ERVL 2 151 -309 307 222 14 0 chr2 36208083 36208155 -214479699 + THE1-int LTR MaLR 495 567 -1013 516 161 0 89 chr2 36211252 36211376 -214476478 + L1PA16 LINE L1 6051 6163 -3 24 53 0 0 chr2 36211501 36211539 -214476315 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr2 36211952 36211982 -214475872 + AT_rich Low_complexity Low_complexity 1 30 0 10942 222 25 18 chr2 36212738 36219208 -214468646 - L1PBa LINE L1 -1227 5635 3 1371 146 218 32 chr2 36219228 36219536 -214468318 - L1PA8A LINE L1 -354 5777 5413 279 328 63 58 chr2 36219951 36220125 -214467729 - MER5B DNA MER1_type -3 175 1 1824 134 29 4 chr2 36220898 36221173 -214466681 + AluSx SINE Alu 1 282 -30 22 0 0 0 chr2 36221182 36221204 -214466650 + AT_rich Low_complexity Low_complexity 1 22 0 6898 42 4 0 chr2 36221334 36222171 -214465683 + L1PA5 LINE L1 5313 6152 -2 23 0 0 0 chr2 36222446 36222469 -214465385 + AT_rich Low_complexity Low_complexity 1 23 0 1339 221 85 12 chr2 36222742 36223073 -214464781 - MER4D LTR ERV1 0 903 549 1656 190 17 0 chr2 36223108 36223397 -214464457 - MER49 LTR ERV1 -629 294 1 290 113 0 19 chr2 36223833 36223886 -214463968 + (GGAA)n Simple_repeat Simple_repeat 4 55 0 180 400 38 0 chr2 36224928 36225033 -214462821 + MIR SINE MIR 52 160 -102 626 241 123 21 chr2 36225288 36225475 -214462379 - MIR SINE MIR -25 237 32 2117 189 31 24 chr2 36227837 36228260 -214459594 + MSTB LTR MaLR 1 426 0 22 56 0 0 chr2 36228596 36228632 -214459222 + AT_rich Low_complexity Low_complexity 1 36 0 234 0 0 0 chr2 36228775 36228801 -214459053 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 270 0 0 0 chr2 36228800 36228830 -214459024 + (CA)n Simple_repeat Simple_repeat 1 30 0 944 355 56 24 chr2 36228840 36229375 -214458479 + L3 LINE CR1 728 1279 -298 279 319 131 11 chr2 36229683 36229943 -214457911 + L1MC/D LINE L1 5258 5548 -2237 26 30 0 0 chr2 36230727 36230760 -214457094 + AT_rich Low_complexity Low_complexity 1 33 0 31 26 0 0 chr2 36230787 36230825 -214457029 + AT_rich Low_complexity Low_complexity 1 38 0 347 213 16 10 chr2 36231965 36231977 -214455877 + MER74A LTR ERVL 267 277 -345 2029 95 49 0 chr2 36231977 36232261 -214455593 - AluY SINE Alu -13 298 1 347 213 16 10 chr2 36232261 36232347 -214455507 + MER74A LTR ERVL 277 426 -196 1085 255 117 57 chr2 36232468 36233679 -214454175 - L1MEc LINE L1 -3685 2879 1656 423 343 40 28 chr2 36233680 36234004 -214453850 - L1MEc LINE L1 -5144 901 574 683 300 84 37 chr2 36234551 36234848 -214453006 - L2 LINE L2 -2 3311 3001 188 375 135 0 chr2 36235344 36235440 -214452414 + L2 LINE L2 3156 3264 -8 243 0 0 0 chr2 36235595 36235622 -214452232 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 5104 30 0 0 chr2 36235623 36236225 -214451629 - L1PA3 LINE L1 0 6155 5554 2462 19 1 0 chr2 36236228 36236628 -214451226 + L1PA3 LINE L1 5155 5555 -600 421 249 154 30 chr2 36238414 36238583 -214449271 + MIR SINE MIR 72 261 -1 258 32 0 0 chr2 36238666 36238697 -214449157 + (CA)n Simple_repeat Simple_repeat 2 32 0 804 187 42 8 chr2 36239836 36240022 -214447832 + MER61D LTR ERV1 259 434 0 25 0 0 0 chr2 36240620 36240645 -214447209 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 36240897 36240922 -214446932 + AT_rich Low_complexity Low_complexity 1 25 0 1077 217 57 102 chr2 36241142 36241892 -214445962 - LTR8A LTR ERV1 -34 693 1 313 303 45 11 chr2 36243551 36243640 -214444214 + L2 LINE L2 3169 3260 -12 464 139 13 0 chr2 36244922 36245001 -214442853 + MADE1 DNA Mariner 1 80 0 243 225 14 28 chr2 36245342 36245413 -214442441 + CT-rich Low_complexity Low_complexity 2 71 0 204 362 65 43 chr2 36245975 36246207 -214441647 + L2 LINE L2 2182 2418 -896 186 43 0 0 chr2 36246218 36246241 -214441613 + (T)n Simple_repeat Simple_repeat 1 23 0 4635 128 4 15 chr2 36246439 36247191 -214440663 + L1PA13 LINE L1 5417 6160 -3 517 183 0 9 chr2 36247194 36247307 -214440547 + L1MA4 LINE L1 6068 6170 -121 252 164 0 0 chr2 36247291 36247346 -214440508 + L1MA4A LINE L1 6244 6298 -5 * 197 253 189 21 chr2 36247608 36247703 -214440151 - MIR SINE MIR -150 112 2 270 367 36 0 chr2 36248462 36248601 -214439253 + MIR SINE MIR 63 206 -56 616 237 35 40 chr2 36249000 36249173 -214438681 - MER20 DNA MER1_type -5 214 43 295 89 36 0 chr2 36249892 36249948 -214437906 + CT-rich Low_complexity Low_complexity 2 59 0 590 333 59 26 chr2 36250042 36250312 -214437542 + L3 LINE CR1 788 1066 -511 338 327 14 23 chr2 36250969 36251183 -214436671 - L1M4 LINE L1 -3358 2788 2577 2082 176 59 5 chr2 36251602 36252006 -214435848 + MSTB LTR MaLR 1 426 0 285 109 0 0 chr2 36252349 36252395 -214435459 + (CA)n Simple_repeat Simple_repeat 2 47 0 480 312 62 10 chr2 36252673 36252981 -214434873 + L1MCc LINE L1 1165 1488 -4935 28208 35 2 1 chr2 36354402 36358783 -214329071 - L1PA4 LINE L1 -21 6134 1749 2009 117 0 4 chr2 36358892 36359200 -214328654 + AluSg SINE Alu 1 307 0 1830 128 16 10 chr2 36359202 36359506 -214328348 - MER61C LTR ERV1 -128 306 1 18089 115 29 16 chr2 36359506 36362487 -214325367 - MER61C-int LTR ERV1 0 5217 2201 709 158 104 0 chr2 36362467 36362631 -214325223 - MER61C-int LTR ERV1 -3338 4199 4019 * 2798 174 66 90 chr2 36362598 36363126 -214324728 - MER61C-int LTR ERV1 -3577 2006 1467 2291 99 3 0 chr2 36363126 36363430 -214324424 + AluY SINE Alu 1 305 -6 2798 174 66 90 chr2 36363430 36363603 -214324251 - MER61C-int LTR ERV1 -4116 1467 1291 2463 86 0 0 chr2 36363603 36363907 -214323947 + AluY SINE Alu 1 304 -7 2798 174 66 90 chr2 36363907 36364524 -214323330 - MER61C-int LTR ERV1 -4292 1291 407 1007 166 6 131 chr2 36364536 36364849 -214323005 - MER61C-int LTR ERV1 -4763 454 181 575 183 0 160 chr2 36364895 36365114 -214322740 - MER61C-int LTR ERV1 -5032 185 2 2584 128 53 5 chr2 36365114 36365528 -214322326 - MER61C LTR ERV1 0 434 1 2959 175 9 22 chr2 36365528 36366169 -214321685 - L1MA3 LINE L1 -220 7504 6872 9297 182 46 15 chr2 36366451 36370527 -214317327 - L1MA3 LINE L1 -1516 6049 1852 1661 131 158 75 chr2 36370527 36370900 -214316954 - MER4A LTR ERV1 0 664 261 516 172 0 10 chr2 36370900 36370999 -214316855 - MER4A LTR ERV1 -566 98 1 4701 231 49 10 chr2 36370999 36371776 -214316078 - L1MA3 LINE L1 -5710 1855 1109 2101 180 28 51 chr2 36371776 36372248 -214315606 - LOR1b LTR ERV1 0 461 1 4701 231 49 10 chr2 36372248 36372915 -214314939 - L1MA3 LINE L1 -6456 1109 15 5566 30 3 0 chr2 36373468 36374679 -214313175 - L1PA4 LINE L1 -211 5944 4732 2533 33 0 0 chr2 36374679 36374976 -214312878 + L1PA4 LINE L1 5852 6152 -3 23 33 0 0 chr2 36374976 36375006 -214312848 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 36375040 36375061 -214312793 + AT_rich Low_complexity Low_complexity 1 21 0 1172 224 92 11 chr2 36375289 36375444 -214312410 + L1MB7 LINE L1 5652 5793 -391 2130 100 7 0 chr2 36375444 36375723 -214312131 - AluY SINE Alu -16 295 15 1172 224 92 11 chr2 36375723 36375947 -214311907 + L1MB7 LINE L1 5793 6062 -122 269 172 16 0 chr2 36376048 36376112 -214311742 + (TA)n Simple_repeat Simple_repeat 1 65 0 201 39 0 0 chr2 36376120 36376146 -214311708 + (CA)n Simple_repeat Simple_repeat 1 26 0 201 355 30 41 chr2 36376671 36376840 -214311014 - MER5A DNA MER1_type -22 167 1 2211 107 0 10 chr2 36377588 36377887 -214309967 + AluSc SINE Alu 1 296 -13 282 343 0 0 chr2 36377944 36378043 -214309811 + (TATATG)n Simple_repeat Simple_repeat 3 101 0 1521 244 38 34 chr2 36378781 36379278 -214308576 + MLT1D LTR MaLR 1 499 -6 226 329 0 0 chr2 36379708 36379781 -214308073 + L2 LINE L2 3199 3271 -1 24 32 0 0 chr2 36380225 36380256 -214307598 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 36381362 36381390 -214306464 + AT_rich Low_complexity Low_complexity 1 28 0 1141 290 34 3 chr2 36381517 36381810 -214306044 + MER45B DNA AcHobo 4 305 -735 1827 169 0 31 chr2 36382641 36382960 -214304894 - AluJb SINE Alu -3 309 1 23 54 0 0 chr2 36382974 36383011 -214304843 + AT_rich Low_complexity Low_complexity 1 37 0 851 67 8 0 chr2 36383197 36383316 -214304538 + (TTCC)n Simple_repeat Simple_repeat 3 122 0 270 129 290 0 chr2 36383748 36383810 -214304044 - MADE1 DNA Mariner 0 80 1 4315 208 49 22 chr2 36383812 36384530 -214303324 + L1MA7 LINE L1 5041 5803 -488 1203 210 83 28 chr2 36384530 36384854 -214303000 - MER2 DNA MER2_type -1 343 2 4315 208 49 22 chr2 36384854 36385345 -214302509 + L1MA7 LINE L1 5803 6279 -12 1777 296 86 37 chr2 36388251 36389249 -214298605 - L2 LINE L2 -25 3288 2232 508 285 154 14 chr2 36389256 36389477 -214298377 - L2 LINE L2 -1704 1610 1359 21 36 0 0 chr2 36389771 36389799 -214298055 + AT_rich Low_complexity Low_complexity 1 28 0 784 307 56 0 chr2 36392572 36392803 -214295051 - L2 LINE L2 -1956 1358 1115 21 82 0 0 chr2 36392844 36392893 -214294961 + AT_rich Low_complexity Low_complexity 1 49 0 1640 173 60 33 chr2 36393239 36393604 -214294250 - THE1C LTR MaLR 0 375 1 33 0 0 0 chr2 36393835 36393868 -214293986 + AT_rich Low_complexity Low_complexity 1 33 0 469 218 11 22 chr2 36395116 36395295 -214292559 + CT-rich Low_complexity Low_complexity 2 178 0 610 316 89 31 chr2 36395751 36396232 -214291622 - L1M4 LINE L1 -1146 5236 4728 1145 203 50 10 chr2 36396347 36396647 -214291207 - MER33 DNA MER1_type -8 316 5 3233 190 21 24 chr2 36396811 36397241 -214290613 + LTR58 LTR ERV1 2 431 -248 1874 144 149 8 chr2 36397241 36397616 -214290238 - MSTA LTR MaLR 0 428 1 3233 190 21 24 chr2 36397616 36397863 -214289991 + LTR58 LTR ERV1 431 677 -2 348 341 29 22 chr2 36397880 36398153 -214289701 - L1MDa LINE L1 -3443 2939 2665 1870 143 4 4 chr2 36398169 36398449 -214289405 - AluSx SINE Alu -32 280 1 26 0 0 0 chr2 36398469 36398495 -214289359 + AT_rich Low_complexity Low_complexity 1 26 0 541 347 89 0 chr2 36398504 36398729 -214289125 + MIR SINE MIR 18 262 0 413 316 37 38 chr2 36398813 36399107 -214288747 - L1MDa LINE L1 -3739 2647 2381 378 263 55 67 chr2 36399105 36399335 -214288519 - L1MDa LINE L1 -4663 1719 1436 * 1701 158 76 20 chr2 36399490 36399844 -214288010 + THE1C LTR MaLR 1 374 -1 5211 201 42 74 chr2 36399845 36401622 -214286232 + THE1C-int LTR MaLR 1 1580 0 1903 118 76 25 chr2 36401622 36401979 -214285875 + THE1C LTR MaLR 1 375 0 32 86 0 0 chr2 36402404 36402485 -214285369 + AT_rich Low_complexity Low_complexity 1 81 0 23 33 0 0 chr2 36402821 36402851 -214285003 + AT_rich Low_complexity Low_complexity 1 30 0 620 233 32 42 chr2 36402995 36403278 -214284576 - L1MC5 LINE L1 -35 7926 7647 190 258 76 0 chr2 36403286 36403352 -214284502 + MIR SINE MIR 105 175 -87 23 33 0 0 chr2 36403476 36403506 -214284348 + AT_rich Low_complexity Low_complexity 1 30 0 1132 166 47 32 chr2 36403841 36404094 -214283760 - Tigger2 DNA MER2_type -10 2708 2452 3829 141 9 20 chr2 36404185 36404831 -214283023 - Tigger2 DNA MER2_type -1974 744 106 13563 63 7 2 chr2 36404965 36406701 -214281153 - L1P LINE L1 -4401 1745 1 738 155 0 0 chr2 36406701 36406817 -214281037 - Tigger2 DNA MER2_type -2602 116 1 604 144 19 0 chr2 36406817 36406921 -214280933 - L1MA5 LINE L1 -23 6979 6874 776 158 24 0 chr2 36406922 36407049 -214280805 + FLAM_C SINE Alu 1 130 -13 12223 216 62 31 chr2 36407053 36413702 -214274152 - L1MA5 LINE L1 -126 6876 11 2019 131 3 0 chr2 36413792 36414082 -214273772 - AluSx SINE Alu -2 310 20 203 211 19 0 chr2 36414201 36414253 -214273601 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 304 258 0 43 chr2 36414490 36414583 -214273271 - L1MC4 LINE L1 -1340 6702 6614 943 230 16 0 chr2 36416770 36416957 -214270897 - LTR16A LTR ERVL -9 441 252 2768 172 14 8 chr2 36417084 36417578 -214270276 - LOR1a LTR ERV1 0 497 1 278 383 51 16 chr2 36417736 36417989 -214269865 + L2 LINE L2 2435 2696 -618 2135 121 7 0 chr2 36418125 36418414 -214269440 - AluSx SINE Alu -19 293 3 25 51 0 0 chr2 36418830 36418869 -214268985 + AT_rich Low_complexity Low_complexity 1 39 0 248 263 13 0 chr2 36418995 36419071 -214268783 - L1ME4a LINE L1 -82 6039 5963 262 310 69 7 chr2 36419204 36419349 -214268505 - L1ME4a LINE L1 -262 5859 5706 250 213 45 45 chr2 36419625 36419780 -214268074 + (TATAA)n Simple_repeat Simple_repeat 4 158 0 587 284 71 43 chr2 36420361 36420615 -214267239 - MIR SINE MIR 0 262 2 26 30 0 0 chr2 36421316 36421349 -214266505 + AT_rich Low_complexity Low_complexity 1 33 0 7056 143 15 21 chr2 36421435 36421469 -214266385 - MER66-int LTR ERV1 0 6676 6643 1817 179 0 7 chr2 36421469 36421770 -214266084 - AluSx SINE Alu -13 299 1 7056 143 15 21 chr2 36421770 36422196 -214265658 - MER66-int LTR ERV1 -33 6643 6216 1981 125 0 76 chr2 36422196 36422524 -214265330 - AluSx SINE Alu -9 303 1 7056 143 15 21 chr2 36422524 36423182 -214264672 - MER66-int LTR ERV1 -460 6216 5564 9922 185 21 51 chr2 36423223 36425361 -214262493 - MER66-int LTR ERV1 -2268 4408 2336 2538 189 31 9 chr2 36425349 36426083 -214261771 - MER66-int LTR ERV1 -4507 2169 1384 * 36 40 0 0 chr2 36426826 36426876 -214260978 + AT_rich Low_complexity Low_complexity 1 50 0 961 211 67 21 chr2 36428879 36429025 -214258829 + MER33 DNA MER1_type 5 143 -2442 2783 3 0 3 chr2 36429025 36429328 -214258526 + AluYa5 SINE Alu 1 302 -9 961 211 67 21 chr2 36429328 36429466 -214258388 + MER33 DNA MER1_type 143 302 -22 255 267 78 52 chr2 36429506 36429622 -214258232 + L2 LINE L2 3193 3311 -2 3727 196 31 40 chr2 36430555 36431480 -214256374 + L1MC3 LINE L1 6860 7776 -9 734 185 8 8 chr2 36431480 36431634 -214256220 - AluJb SINE Alu 0 306 153 831 113 24 0 chr2 36431665 36431810 -214256044 - FLAM_C SINE Alu 0 164 17 2499 147 94 2 chr2 36432888 36433343 -214254511 - LOR1a LTR ERV1 0 497 1 26 0 0 0 chr2 36434515 36434541 -214253313 + AT_rich Low_complexity Low_complexity 1 26 0 2243 43 11 0 chr2 36434541 36434819 -214253035 - L1PA5 LINE L1 -7 6147 5867 252 125 50 0 chr2 36434819 36434859 -214252995 + L1P5 LINE L1 5680 5721 -430 7249 181 49 78 chr2 36435872 36437679 -214250175 + MER52A LTR ERV1 1 1755 0 974 249 75 19 chr2 36439478 36439799 -214248055 + MER2 DNA MER2_type 2 340 -4 736 104 64 8 chr2 36440027 36440152 -214247702 - AluSp/q SINE Alu -2 311 180 237 337 143 0 chr2 36440197 36440295 -214247559 + MIR3 SINE MIR 89 200 -8 22 35 0 0 chr2 36440365 36440394 -214247460 + AT_rich Low_complexity Low_complexity 1 29 0 2009 152 0 0 chr2 36440399 36440708 -214247146 + AluSx SINE Alu 1 309 -3 2243 62 0 7 chr2 36440967 36441240 -214246614 - AluY SINE Alu -20 291 21 209 371 21 0 chr2 36442527 36442667 -214245187 + L2 LINE L2 2644 2786 -528 265 304 101 19 chr2 36442926 36443084 -214244770 + MLT1I LTR MaLR 39 209 -200 251 143 0 0 chr2 36444565 36444600 -214243254 + Alu SINE Alu 2 36 -267 1226 91 81 16 chr2 36444603 36444789 -214243065 + AluSg/x SINE Alu 107 304 -8 324 238 0 48 chr2 36446069 36446153 -214241701 + L1MC4 LINE L1 6624 6703 -1339 613 278 117 68 chr2 36446229 36446683 -214241171 + MLT1H LTR MaLR 62 537 -12 2068 112 7 0 chr2 36447017 36447304 -214240550 + AluSq SINE Alu 1 289 -24 383 244 104 0 chr2 36447427 36447562 -214240292 - MER20B DNA MER1_type -41 742 594 644 249 68 42 chr2 36447690 36447927 -214239927 - MER20B DNA MER1_type -416 367 125 817 294 89 23 chr2 36448235 36448718 -214239136 - HAL1 LINE L1 -335 2172 1658 290 380 97 8 chr2 36449031 36449268 -214238586 - HAL1 LINE L1 -1926 581 324 1771 166 0 3 chr2 36449672 36449956 -214237898 + AluSx SINE Alu 3 285 -27 838 282 86 67 chr2 36450539 36451835 -214236019 - L1M4 LINE L1 -2159 3987 2668 923 226 26 34 chr2 36451878 36452144 -214235710 - L1MC3 LINE L1 -163 7622 7359 819 346 61 66 chr2 36452149 36453602 -214234252 - L1MEc LINE L1 -958 5424 3980 5766 221 41 79 chr2 36453652 36455379 -214232475 - L1 LINE L1 -1510 4636 2976 23 54 0 0 chr2 36455539 36455576 -214232278 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 36455608 36455629 -214232225 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 36455759 36455784 -214232070 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 36455824 36455849 -214232005 + AT_rich Low_complexity Low_complexity 1 25 0 194 156 22 0 chr2 36455892 36455937 -214231917 + CT-rich Low_complexity Low_complexity 1 46 0 394 287 139 43 chr2 36455966 36456871 -214230983 - L1MEc LINE L1 -2914 3468 2477 420 300 137 23 chr2 36456942 36457285 -214230569 - L1MEc LINE L1 -4109 2454 2073 504 297 75 65 chr2 36457301 36457935 -214229919 - L1MEc LINE L1 -4443 1939 1173 216 149 0 0 chr2 36458643 36458690 -214229164 + (CAAAAA)n Simple_repeat Simple_repeat 4 50 0 324 0 0 0 chr2 36461916 36461952 -214225902 + (TG)n Simple_repeat Simple_repeat 2 37 0 888 194 68 10 chr2 36463204 36463410 -214224444 + MER20 DNA MER1_type 1 218 -1 553 252 49 0 chr2 36463462 36463605 -214224249 + L2 LINE L2 3164 3313 0 1073 184 67 79 chr2 36463795 36464110 -214223744 - L1MA9 LINE L1 -38 6274 5964 1268 143 23 19 chr2 36464110 36464326 -214223528 - Tigger3b DNA MER2_type -741 490 274 587 188 10 0 chr2 36464324 36464425 -214223429 - Tigger3b DNA MER2_type -1129 102 1 * 279 89 22 0 chr2 36464474 36464519 -214223335 - MADE1 DNA Mariner 0 80 35 332 121 0 52 chr2 36464826 36464884 -214222970 + MLT1A1 LTR MaLR 1 55 -412 * 971 178 37 11 chr2 36464880 36465071 -214222783 + MLT1A1 LTR MaLR 170 365 0 564 292 97 84 chr2 36465078 36465674 -214222180 - HAL1b LINE L1 -650 698 95 180 77 0 0 chr2 36466263 36466289 -214221565 + (CAAAG)n Simple_repeat Simple_repeat 1 26 0 251 227 0 68 chr2 36466350 36466438 -214221416 - L1MC/D LINE L1 -1926 5882 5801 21 0 0 0 chr2 36467168 36467189 -214220665 + AT_rich Low_complexity Low_complexity 1 21 0 2186 128 0 0 chr2 36467217 36467522 -214220332 - AluSx SINE Alu -7 305 1 1384 167 9 66 chr2 36467948 36468266 -214219588 - AluJo SINE Alu -12 300 1 405 397 15 15 chr2 36469678 36469877 -214217977 + MIR SINE MIR 20 218 -44 2220 105 12 6 chr2 36469919 36470262 -214217592 - THE1C-int LTR MaLR -1233 347 3 2550 48 0 10 chr2 36470281 36470594 -214217260 - AluY SINE Alu -1 310 1 931 106 8 0 chr2 36470594 36470726 -214217128 - THE1C LTR MaLR -6 369 237 2244 101 0 0 chr2 36471236 36471534 -214216320 + AluSc SINE Alu 1 298 -11 250 225 175 58 chr2 36472023 36472143 -214215711 - MER5A DNA MER1_type -1 188 55 1709 141 0 57 chr2 36475158 36475313 -214212541 - AluSx SINE Alu -30 282 151 2193 110 0 10 chr2 36475313 36475613 -214212241 - AluSx SINE Alu -15 297 1 1709 141 0 57 chr2 36475613 36475756 -214212098 - AluSx SINE Alu -161 151 1 2313 78 0 31 chr2 36475989 36476308 -214211546 - AluY SINE Alu 0 311 3 355 274 49 10 chr2 36476845 36476947 -214210907 - MIR SINE MIR -50 212 107 23 33 0 0 chr2 36476963 36476993 -214210861 + AT_rich Low_complexity Low_complexity 1 30 0 228 153 51 0 chr2 36477166 36477225 -214210629 + (TA)n Simple_repeat Simple_repeat 1 62 0 490 297 26 0 chr2 36477238 36477393 -214210461 - LTR16A LTR ERVL -9 441 283 25 51 0 0 chr2 36478289 36478328 -214209526 + AT_rich Low_complexity Low_complexity 1 39 0 275 301 41 49 chr2 36479271 36479394 -214208460 + MIR SINE MIR 1 122 -140 620 275 42 5 chr2 36479453 36479642 -214208212 + L2 LINE L2 3107 3302 -11 236 288 234 5 chr2 36479737 36479921 -214207933 + MIR SINE MIR 36 261 -1 21 89 0 0 chr2 36480640 36480696 -214207158 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr2 36480898 36480921 -214206933 + AT_rich Low_complexity Low_complexity 1 23 0 1052 316 76 8 chr2 36480934 36481330 -214206524 - LTR16A LTR ERVL -9 441 19 943 272 13 8 chr2 36481897 36482132 -214205722 + LTR16A LTR ERVL 204 439 -11 1468 334 59 32 chr2 36482676 36483494 -214204360 + HERV16 LTR ERVL 734 1573 -3423 954 189 37 65 chr2 36483518 36483735 -214204119 + MER20 DNA MER1_type 1 211 -8 977 281 93 70 chr2 36483761 36484301 -214203553 + HERV16 LTR ERVL 1659 2210 -2786 3587 270 110 36 chr2 36484546 36486146 -214201708 + L1ME LINE L1 254 1733 -4347 1048 228 29 63 chr2 36486146 36486524 -214201330 - MLT1A1 LTR MaLR 0 365 1 3587 270 110 36 chr2 36486524 36488073 -214199781 + L1ME LINE L1 1733 3165 -2915 2224 96 0 3 chr2 36488073 36488365 -214199489 - AluSg1 SINE Alu -18 291 1 3587 270 110 36 chr2 36488365 36489094 -214198760 + L1ME LINE L1 3165 4418 -1662 1967 151 3 0 chr2 36489094 36489399 -214198455 + AluSx SINE Alu 1 306 -6 3587 270 110 36 chr2 36489399 36489476 -214198378 + L1ME LINE L1 4418 4488 -1592 744 199 75 70 chr2 36489478 36489664 -214198190 + MLT2B1 LTR ERVL 150 336 -184 1594 281 64 12 chr2 36489664 36490911 -214196943 + L1ME LINE L1 4757 6094 -10 1638 322 55 45 chr2 36490943 36492072 -214195782 + HERV16 LTR ERVL 2268 3076 -1920 6609 174 31 26 chr2 36492307 36493694 -214194160 - Ricksha DNA DNA -11 3235 1882 587 162 0 18 chr2 36493692 36493803 -214194051 - Ricksha DNA DNA -1071 110 2 * 1913 157 6 10 chr2 36493876 36494189 -214193665 + AluSx SINE Alu 1 312 0 827 318 68 23 chr2 36495611 36496010 -214191844 + LTR16A LTR ERVL 12 428 -22 346 273 123 45 chr2 36496043 36496197 -214191657 + L1MEd LINE L1 594 759 -5360 733 242 79 44 chr2 36496206 36496611 -214191243 + L1MEd LINE L1 791 1209 -4910 21 0 0 0 chr2 36496646 36496667 -214191187 + AT_rich Low_complexity Low_complexity 1 21 0 245 250 29 0 chr2 36496780 36496848 -214191006 + L1MEd LINE L1 1293 1362 -4767 1225 181 28 113 chr2 36497027 36497426 -214190428 - MLT1A1 LTR MaLR 0 365 1 206 179 60 0 chr2 36498490 36498557 -214189297 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 2298 97 0 0 chr2 36498948 36499256 -214188598 + AluSg SINE Alu 1 308 -2 1983 175 86 2 chr2 36500154 36500549 -214187305 - MSTB1 LTR MaLR -4 428 1 2272 99 3 3 chr2 36500930 36501243 -214186611 + AluSp SINE Alu 1 313 0 316 0 45 0 chr2 36502857 36502901 -214184953 + (TG)n Simple_repeat Simple_repeat 1 46 0 180 0 0 0 chr2 36502900 36502920 -214184934 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 537 250 54 14 chr2 36503165 36503313 -214184541 + L2 LINE L2 3160 3313 0 252 374 0 0 chr2 36503333 36503424 -214184430 + L2 LINE L2 3203 3293 -20 270 284 14 0 chr2 36503643 36503717 -214184137 - MIR SINE MIR -14 248 174 2310 113 8 41 chr2 36503722 36504110 -214183744 + THE1C LTR MaLR 1 375 0 446 274 57 8 chr2 36504121 36504245 -214183609 - MIR SINE MIR -110 152 23 443 208 0 40 chr2 36504289 36504390 -214183464 - MER2 DNA MER2_type -248 97 1 319 286 146 11 chr2 36504633 36504811 -214183043 + MIR SINE MIR 60 261 -1 3446 187 31 42 chr2 36504944 36505164 -214182690 - MER44D DNA MER2_type -1889 598 377 2328 142 53 5 chr2 36505164 36505580 -214182274 - L1PA16 LINE L1 -11 6155 5720 3446 187 31 42 chr2 36505580 36506092 -214181762 - MER44D DNA MER2_type -2110 377 2 202 377 9 44 chr2 36506300 36506414 -214181440 - MIR SINE MIR -83 125 16 840 169 0 0 chr2 36506613 36506761 -214181093 - L1MA3 LINE L1 0 7724 7577 1810 172 49 58 chr2 36506761 36507312 -214180542 - MLT2A2 LTR ERVL 0 554 1 12363 168 38 53 chr2 36507312 36507531 -214180323 - L1MA3 LINE L1 -143 7581 7360 3746 42 0 0 chr2 36507531 36507985 -214179869 - L1PA4 LINE L1 0 6155 5702 12363 168 38 53 chr2 36507985 36510199 -214177655 - L1MA3 LINE L1 -364 7360 5114 234 0 0 0 chr2 36510199 36510225 -214177629 + (TTA)n Simple_repeat Simple_repeat 2 27 0 12363 168 38 53 chr2 36510225 36511363 -214176491 - L1MA3 LINE L1 -2610 5114 3960 2340 103 3 0 chr2 36511363 36511674 -214176180 - AluSx SINE Alu 0 312 1 12363 168 38 53 chr2 36511674 36512709 -214175145 - L1MA3 LINE L1 -3764 3960 3082 1985 127 24 63 chr2 36512709 36513088 -214174766 - THE1B LTR MaLR 0 364 1 12363 168 38 53 chr2 36513088 36514258 -214173596 - L1MA3 LINE L1 -4642 3082 1896 2488 217 2 14 chr2 36514251 36514762 -214173092 - L1MA3 LINE L1 -7048 517 13 * 2148 236 63 22 chr2 36515092 36515668 -214172186 - L1M4 LINE L1 -1870 4276 3672 1529 278 41 8 chr2 36515668 36516154 -214171700 - MLT1D LTR MaLR 0 505 4 2148 236 63 22 chr2 36516154 36516200 -214171654 - L1M4 LINE L1 -2474 3672 3629 647 234 31 26 chr2 36516201 36516393 -214171461 + L1MB8 LINE L1 5985 6177 -1 26 30 0 0 chr2 36516625 36516658 -214171196 + AT_rich Low_complexity Low_complexity 1 33 0 184 333 132 65 chr2 36516922 36517686 -214170168 - L2 LINE L2 -423 2891 2077 45 45 0 0 chr2 36517690 36517756 -214170098 + AT_rich Low_complexity Low_complexity 1 66 0 308 333 48 48 chr2 36518231 36518420 -214169434 + L1ME LINE L1 4 192 -5878 211 213 21 0 chr2 36518559 36518606 -214169248 + MIR SINE MIR 162 209 -53 2083 117 3 3 chr2 36519910 36520218 -214167636 + AluSc SINE Alu 1 308 -1 387 41 0 0 chr2 36521926 36521975 -214165879 + (TG)n Simple_repeat Simple_repeat 2 50 0 190 260 0 96 chr2 36522355 36522428 -214165426 + MER5A DNA MER1_type 124 189 0 799 277 47 16 chr2 36523251 36523504 -214164350 - MIR SINE MIR 0 262 2 276 332 58 23 chr2 36524009 36524319 -214163535 - L1ME LINE L1 -286 5884 5564 25 0 0 0 chr2 36524539 36524564 -214163290 + AT_rich Low_complexity Low_complexity 1 25 0 625 344 80 35 chr2 36524719 36525460 -214162394 - L1ME LINE L1 -1301 4845 4072 245 214 0 100 chr2 36525911 36525981 -214161873 + MLT1F1 LTR MaLR 55 117 -450 1889 199 49 76 chr2 36525986 36526594 -214161260 + L1MD3 LINE L1 7402 7993 -2 188 111 28 0 chr2 36527128 36527164 -214160690 + GA-rich Low_complexity Low_complexity 4 40 0 319 293 16 0 chr2 36527515 36527638 -214160216 - L1MC5 LINE L1 -466 7495 7371 1035 188 132 91 chr2 36527650 36527996 -214159858 - L1MC5 LINE L1 -823 7138 6765 191 36 36 0 chr2 36527996 36528024 -214159830 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1035 188 132 91 chr2 36528024 36528162 -214159692 - L1MC5 LINE L1 -1196 6765 6634 784 281 102 61 chr2 36528755 36529360 -214158494 - L1MC5 LINE L1 -1883 5925 5296 1557 189 3 10 chr2 36529392 36529693 -214158161 - AluJo SINE Alu 0 312 14 994 232 99 0 chr2 36529784 36530056 -214157798 - MER58B DNA MER1_type 0 341 43 14197 189 18 4 chr2 36530083 36534101 -214153753 - L1MA3 LINE L1 0 7724 3649 2540 170 20 38 chr2 36534094 36534594 -214153260 - L1MA3 LINE L1 -7060 505 15 * 604 330 71 35 chr2 36534594 36535396 -214152458 - L1MC5 LINE L1 -1946 4200 3370 2371 163 9 32 chr2 36535506 36535942 -214151912 + MSTB LTR MaLR 1 426 0 21 36 0 0 chr2 36536305 36536333 -214151521 + AT_rich Low_complexity Low_complexity 1 28 0 37 23 0 0 chr2 36537455 36537499 -214150355 + AT_rich Low_complexity Low_complexity 1 44 0 265 264 204 30 chr2 36537933 36538134 -214149720 - HAL1b LINE L1 -733 615 380 31 44 0 0 chr2 36538238 36538283 -214149571 + AT_rich Low_complexity Low_complexity 1 45 0 212 215 62 0 chr2 36538337 36538402 -214149452 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 24 32 0 0 chr2 36538789 36538820 -214149034 + AT_rich Low_complexity Low_complexity 1 31 0 210 143 0 48 chr2 36540843 36540885 -214146969 + (TAAAAA)n Simple_repeat Simple_repeat 1 40 0 1004 239 40 71 chr2 36540960 36541381 -214146473 + L1ME LINE L1 4997 5406 -835 2198 94 10 10 chr2 36541381 36541689 -214146165 + AluSq SINE Alu 2 309 -4 1004 239 40 71 chr2 36541689 36541780 -214146074 + L1ME LINE L1 5406 5498 -743 241 293 49 37 chr2 36542557 36542639 -214145215 + L2 LINE L2 3189 3271 -1 2754 22 0 0 chr2 36543908 36544222 -214143632 - AluYb8 SINE Alu -4 314 1 26 0 0 0 chr2 36544635 36544661 -214143193 + AT_rich Low_complexity Low_complexity 1 26 0 2057 120 0 10 chr2 36546617 36546916 -214140938 - AluSg SINE Alu -14 296 1 272 227 23 91 chr2 36546917 36547005 -214140849 + MIR SINE MIR 88 169 -93 22 0 0 0 chr2 36547033 36547055 -214140799 + AT_rich Low_complexity Low_complexity 1 22 0 2272 272 87 44 chr2 36547159 36547294 -214140560 - L1M4 LINE L1 -1820 4326 4198 312 27 0 0 chr2 36547294 36547331 -214140523 + (TG)n Simple_repeat Simple_repeat 2 38 0 1835 196 75 8 chr2 36547336 36547735 -214140119 - MSTB LTR MaLR 0 426 1 2272 272 87 44 chr2 36547735 36548201 -214139653 - L1M4 LINE L1 -1951 4195 3750 1849 147 40 0 chr2 36548201 36548500 -214139354 - AluSx SINE Alu -1 311 1 2272 272 87 44 chr2 36548500 36549743 -214138111 - L1M4 LINE L1 -2396 3750 2396 21 36 0 0 chr2 36550057 36550085 -214137769 + AT_rich Low_complexity Low_complexity 1 28 0 786 220 17 62 chr2 36550525 36550766 -214137088 - L1M4 LINE L1 -1244 4902 4673 1038 267 74 30 chr2 36551142 36551546 -214136308 - L1ME1 LINE L1 -5 6144 5723 920 248 44 35 chr2 36551541 36552083 -214135771 - L1ME1 LINE L1 -822 5307 4704 * 696 277 11 11 chr2 36552086 36552274 -214135580 + MER58A DNA MER1_type 37 224 0 38 22 0 0 chr2 36552365 36552410 -214135444 + AT_rich Low_complexity Low_complexity 1 45 0 338 317 116 39 chr2 36552567 36552851 -214135003 + L1ME LINE L1 5491 5796 -325 395 342 40 13 chr2 36553787 36554015 -214133839 - MIR SINE MIR -16 246 13 291 318 119 35 chr2 36554877 36555573 -214132281 + HAL1 LINE L1 947 1701 -806 1504 169 91 20 chr2 36555688 36556038 -214131816 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 36556063 36556084 -214131770 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 36556431 36556459 -214131395 + AT_rich Low_complexity Low_complexity 1 28 0 347 202 20 130 chr2 36556709 36556955 -214130899 + HAL1b LINE L1 746 2350 -157 198 192 0 0 chr2 36557017 36557069 -214130785 + (TA)n Simple_repeat Simple_repeat 1 52 0 429 229 0 38 chr2 36557173 36557278 -214130576 - HsTC2 DNA Tc2 -1793 105 5 1570 254 62 81 chr2 36558225 36558952 -214128902 + L1M3e LINE L1 466 1178 -6311 3253 249 51 71 chr2 36558976 36560292 -214127562 + L1M3e LINE L1 2011 3289 -4276 300 53 0 0 chr2 36560292 36560330 -214127524 + (TG)n Simple_repeat Simple_repeat 1 38 0 3253 249 51 71 chr2 36560330 36560652 -214127202 + L1M3e LINE L1 3289 3616 -3949 985 292 144 7 chr2 36560707 36561388 -214126466 - L1ME1 LINE L1 -1745 4384 3611 602 244 36 36 chr2 36561407 36561575 -214126279 - FAM SINE Alu -17 168 1 260 244 77 0 chr2 36561621 36561699 -214126155 - L1ME1 LINE L1 -2590 3539 3456 1159 294 58 40 chr2 36562851 36563668 -214124186 - L1ME1 LINE L1 -3050 3079 2249 248 261 269 27 chr2 36563857 36564114 -214123740 - L1ME1 LINE L1 -4654 1656 1338 312 368 13 13 chr2 36564218 36564373 -214123481 - L1ME1 LINE L1 -4910 1209 1055 27 0 0 0 chr2 36565322 36565349 -214122505 + AT_rich Low_complexity Low_complexity 1 27 0 436 320 45 17 chr2 36565850 36566028 -214121826 + MIR SINE MIR 22 204 -58 209 157 0 39 chr2 36566686 36566737 -214121117 + A-rich Low_complexity Low_complexity 1 49 0 1694 150 43 40 chr2 36567359 36567733 -214120121 - THE1C LTR MaLR 0 375 1 187 230 70 50 chr2 36567739 36567839 -214120015 - MIR SINE MIR -10 252 151 232 397 26 0 chr2 36568091 36568169 -214119685 - L3 LINE CR1 -3 1574 1495 191 439 9 0 chr2 36568691 36568805 -214119049 - L2 LINE L2 -635 2679 2565 243 0 0 0 chr2 36569125 36569152 -214118702 + (CA)n Simple_repeat Simple_repeat 2 28 0 6057 174 23 26 chr2 36571574 36574514 -214113340 + L1PA11 LINE L1 10 2957 -3532 859 30 0 0 chr2 36574514 36574614 -214113240 + L1PA3 LINE L1 6052 6152 -3 6057 174 23 26 chr2 36574614 36578049 -214109805 + L1PA11 LINE L1 2957 6488 -1 397 232 0 0 chr2 36578137 36578206 -214109648 - Tigger2 DNA MER2_type -10 2708 2640 1275 156 128 12 chr2 36578206 36578492 -214109362 - AluSg1 SINE Alu 0 315 1 6717 156 44 14 chr2 36578492 36579685 -214108169 - Tigger2 DNA MER2_type -60 2658 1430 3511 160 26 14 chr2 36579679 36580328 -214107526 - Tigger2 DNA MER2_type -2057 661 5 * 1805 134 66 41 chr2 36580752 36581117 -214106737 + THE1C LTR MaLR 1 374 -1 357 340 31 12 chr2 36581124 36581286 -214106568 + L1MCa LINE L1 1029 1193 -5233 1540 230 13 10 chr2 36581320 36581624 -214106230 + L1M4b LINE L1 8 312 -6547 * 3719 242 66 15 chr2 36581619 36582630 -214105224 + L1M4b LINE L1 523 1585 -5274 593 264 48 50 chr2 36582628 36583010 -214104844 + L1PBa LINE L1 1593 1988 -4228 * 966 162 62 0 chr2 36583103 36583282 -214104572 - L1PB4 LINE L1 -3 6153 5964 5437 255 33 48 chr2 36583389 36585446 -214102408 + L1M4b LINE L1 2618 4704 -2253 2072 90 36 7 chr2 36585446 36585723 -214102131 + AluY SINE Alu 1 285 -26 5437 255 33 48 chr2 36585723 36585953 -214101901 + L1M4b LINE L1 4704 4936 -2021 348 83 0 0 chr2 36585953 36586001 -214101853 + (TAA)n Simple_repeat Simple_repeat 2 49 0 5437 255 33 48 chr2 36586001 36586571 -214101283 + L1M4b LINE L1 4936 5414 -1543 1637 227 39 32 chr2 36586575 36586720 -214101134 + L1MB8 LINE L1 5327 5469 -1488 11303 30 2 1 chr2 36586720 36588843 -214099011 + L1PA4 LINE L1 4028 6154 -1 1637 227 39 32 chr2 36588843 36588973 -214098881 + L1MB8 LINE L1 5469 5597 -1360 357 24 0 0 chr2 36588973 36589015 -214098839 + (TG)n Simple_repeat Simple_repeat 2 43 0 1637 227 39 32 chr2 36589015 36589271 -214098583 + L1MB8 LINE L1 5597 5863 -1094 2194 178 72 38 chr2 36589289 36590070 -214097784 + L1MB8 LINE L1 5815 6619 -376 4837 110 13 7 chr2 36590087 36590841 -214097013 - L1MA1 LINE L1 0 7721 6963 862 159 0 0 chr2 36590842 36590974 -214096880 + AluJb SINE Alu 1 132 -180 14352 173 20 31 chr2 36590981 36591761 -214096093 - L1MA1 LINE L1 -745 6820 6033 2083 112 25 0 chr2 36591761 36592039 -214095815 + AluSx SINE Alu 1 285 -27 14352 173 20 31 chr2 36592039 36592194 -214095660 - L1MA1 LINE L1 -1532 6033 5878 192 40 0 0 chr2 36592194 36592219 -214095635 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 14352 173 20 31 chr2 36592219 36597607 -214090247 - L1MA1 LINE L1 -1687 5878 12 951 241 50 64 chr2 36597613 36597645 -214090209 + L1MB8 LINE L1 6614 6645 -344 13524 152 30 10 chr2 36597645 36600011 -214087843 + Tigger1 DNA MER2_type 4 2418 0 951 241 50 64 chr2 36600011 36600355 -214087499 + L1MB8 LINE L1 6645 6985 -4 2266 232 96 30 chr2 36600486 36601697 -214086157 + L1MCb LINE L1 832 2378 -4367 257 75 25 0 chr2 36601708 36601748 -214086106 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 2629 247 48 22 chr2 36601755 36602746 -214085108 + L1MCb LINE L1 2540 3519 -3045 593 301 63 3 chr2 36602780 36603129 -214084725 + L1MCb LINE L1 4699 5068 -1496 34 0 0 0 chr2 36603152 36603186 -214084668 + AT_rich Low_complexity Low_complexity 1 34 0 209 200 0 0 chr2 36603268 36603313 -214084541 + (TATATG)n Simple_repeat Simple_repeat 3 47 0 252 185 0 0 chr2 36603626 36603680 -214084174 + GA-rich Low_complexity Low_complexity 3 56 0 868 181 57 76 chr2 36603730 36603940 -214083914 - MER2 DNA MER2_type -139 206 1 38355 54 52 1 chr2 36604150 36609998 -214077856 + L1PA4 LINE L1 1 6155 0 794 263 21 29 chr2 36610075 36610145 -214077709 + MLT1E1 LTR MaLR 417 486 -168 2040 143 0 7 chr2 36610145 36610445 -214077409 + AluSx SINE Alu 1 298 -14 794 263 21 29 chr2 36610445 36610614 -214077240 + MLT1E1 LTR MaLR 486 654 0 232 315 0 0 chr2 36611292 36611346 -214076508 + L2 LINE L2 3209 3262 -10 24 77 0 0 chr2 36612472 36612524 -214075330 + AT_rich Low_complexity Low_complexity 1 52 0 203 283 11 65 chr2 36613289 36613381 -214074473 - L2 LINE L2 -810 2504 2418 258 258 0 0 chr2 36614598 36614660 -214073194 - MLT1J2 LTR MaLR -28 422 361 21 36 0 0 chr2 36615216 36615244 -214072610 + AT_rich Low_complexity Low_complexity 1 28 0 278 348 14 13 chr2 36616498 36616623 -214071231 + MIR SINE MIR 22 146 -62 2480 81 41 9 chr2 36617849 36618193 -214069661 + THE1A LTR MaLR 1 355 0 11547 98 4 7 chr2 36618193 36619772 -214068082 + THE1A-int LTR MaLR 1 1574 -6 2513 82 29 3 chr2 36619777 36620120 -214067734 + THE1A LTR MaLR 1 352 -3 507 293 104 73 chr2 36621436 36621849 -214066005 + LTR33 LTR ERVL 1 426 -95 1478 258 104 43 chr2 36621851 36622390 -214065464 + MLT1G LTR MaLR 1 572 -18 339 263 42 11 chr2 36622407 36622502 -214065352 + LTR33 LTR ERVL 424 521 0 213 136 0 119 chr2 36623455 36623514 -214064340 + L2 LINE L2 3221 3272 0 2203 131 39 45 chr2 36625451 36625810 -214062044 + LTR18A LTR ERVL 1 357 0 1543 181 3 34 chr2 36625834 36626127 -214061727 + HERVL18 LTR ERVL 95 378 -5669 * 1701 188 10 9 chr2 36626122 36626631 -214061223 + HERVL18 LTR ERVL 1238 1810 -4237 1371 143 28 2 chr2 36626630 36626898 -214060956 + HERVL18 LTR ERVL 2119 2452 -3595 * 5197 167 2 25 chr2 36626897 36627776 -214060078 + HERVL18 LTR ERVL 2720 3578 -2469 650 128 11 0 chr2 36627779 36627873 -214059981 + HERVL18 LTR ERVL 4394 4488 -1559 2274 126 22 44 chr2 36628141 36628506 -214059348 + LTR18A LTR ERVL 1 357 0 1486 114 22 13 chr2 36628942 36629170 -214058684 + MER50 LTR ERV1 3 232 -502 1441 133 13 94 chr2 36629172 36629481 -214058373 + MER50 LTR ERV1 435 718 -16 432 0 0 0 chr2 36629481 36629529 -214058325 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 210 71 0 0 chr2 36629530 36629558 -214058296 + (CATA)n Simple_repeat Simple_repeat 1 28 0 948 266 149 0 chr2 36629872 36630154 -214057700 - MLT1G1 LTR MaLR -5 590 267 931 314 93 20 chr2 36631393 36631980 -214055874 + L2 LINE L2 2606 3312 -1 219 171 0 0 chr2 36633013 36633054 -214054800 + MIR3 SINE MIR 168 208 0 334 324 70 38 chr2 36635937 36636122 -214051732 + MIR SINE MIR 2 192 -70 204 111 0 0 chr2 36637219 36637255 -214050599 + (CAA)n Simple_repeat Simple_repeat 2 37 0 2107 143 7 0 chr2 36637261 36637568 -214050286 + AluSx SINE Alu 2 310 -2 2834 19 0 0 chr2 36637653 36637973 -214049881 - L1PA4 LINE L1 -383 5772 5453 3195 33 5 8 chr2 36637973 36638361 -214049493 + L1PA4 LINE L1 5762 6155 0 190 278 56 0 chr2 36638362 36638416 -214049438 + MER5A DNA MER1_type 61 117 -72 419 259 97 30 chr2 36639121 36639307 -214048547 + LTR33A LTR ERVL 59 247 -274 246 343 97 0 chr2 36639717 36639895 -214047959 - MIR3 SINE MIR -7 201 3 255 410 0 0 chr2 36640560 36640643 -214047211 + MIR SINE MIR 4 86 -176 327 128 0 0 chr2 36640973 36641020 -214046834 + L1PBa LINE L1 1109 1155 -5708 9990 207 27 10 chr2 36641026 36644722 -214043132 + L1PBa LINE L1 1311 5090 -1772 2209 116 17 9 chr2 36644827 36645173 -214042681 + L1PA11 LINE L1 5825 6173 -1 400 232 0 0 chr2 36645261 36645330 -214042524 - Tigger2 DNA MER2_type -10 2708 2640 1304 156 128 12 chr2 36645330 36645616 -214042238 - AluSg1 SINE Alu 0 315 1 6703 156 44 14 chr2 36645616 36646809 -214041045 - Tigger2 DNA MER2_type -60 2658 1430 3471 160 26 14 chr2 36646803 36647452 -214040402 - Tigger2 DNA MER2_type -2057 661 5 * 1824 134 66 41 chr2 36647876 36648241 -214039613 + THE1C LTR MaLR 1 374 -1 227 281 44 44 chr2 36648296 36648410 -214039444 + L1MCa LINE L1 1080 1193 -5233 1537 230 13 10 chr2 36648444 36648748 -214039106 + L1M4b LINE L1 8 312 -6547 * 3697 239 67 16 chr2 36648743 36649754 -214038100 + L1M4b LINE L1 523 1585 -5274 568 264 48 50 chr2 36649752 36650134 -214037720 + L1PBa LINE L1 1593 1988 -4228 * 977 162 62 0 chr2 36650227 36650406 -214037448 - L1PB4 LINE L1 -3 6153 5964 6232 261 33 41 chr2 36650513 36652570 -214035284 + L1M4b LINE L1 2618 4690 -2267 2072 90 36 7 chr2 36652570 36652847 -214035007 + AluY SINE Alu 1 285 -26 6232 261 33 41 chr2 36652847 36653077 -214034777 + L1M4b LINE L1 4690 4920 -2037 369 62 0 0 chr2 36653077 36653125 -214034729 + (TAA)n Simple_repeat Simple_repeat 2 49 0 6232 261 33 41 chr2 36653125 36653695 -214034159 + L1M4b LINE L1 4920 5414 -1543 457 246 48 36 chr2 36653699 36653866 -214033988 + L1M4 LINE L1 5327 5495 -1462 * 11321 33 3 0 chr2 36653844 36655829 -214032025 + L1PA5 LINE L1 4839 6828 -137 644 236 11 22 chr2 36655830 36656012 -214031842 - L1M4 LINE L1 -785 5361 5182 1452 135 38 0 chr2 36656087 36656353 -214031501 + L1MA4 LINE L1 6014 6289 -11 444 319 58 16 chr2 36656407 36656595 -214031259 + L2 LINE L2 2936 3131 -182 362 188 0 0 chr2 36657030 36657094 -214030760 + L2 LINE L2 3207 3270 -2 240 194 32 16 chr2 36657096 36657158 -214030696 + GA-rich Low_complexity Low_complexity 3 65 0 2419 93 0 3 chr2 36659033 36659344 -214028510 + AluSq SINE Alu 1 310 -3 495 350 14 18 chr2 36659968 36660185 -214027669 + MLT1I LTR MaLR 3 218 -191 2656 117 7 21 chr2 36660209 36660382 -214027472 + L1PA13 LINE L1 5725 5899 -264 2382 141 6 3 chr2 36660382 36660745 -214027109 - THE1B LTR MaLR 0 364 1 2656 117 7 21 chr2 36660745 36660997 -214026857 + L1PA13 LINE L1 5899 6144 -19 1620 281 28 67 chr2 36661104 36661494 -214026360 + MLT1E LTR MaLR 3 407 -186 2256 122 0 0 chr2 36661494 36661806 -214026048 + AluSx SINE Alu 1 312 0 1620 281 28 67 chr2 36661806 36661924 -214025930 + MLT1E LTR MaLR 407 485 -108 1366 106 37 5 chr2 36661924 36662142 -214025712 - L1PA11 LINE L1 -1 6173 5949 1620 281 28 67 chr2 36662142 36662247 -214025607 + MLT1E LTR MaLR 485 593 0 247 270 0 0 chr2 36662247 36662310 -214025544 + MLT1I LTR MaLR 345 407 -2 263 183 17 0 chr2 36662387 36662480 -214025374 + AluSc SINE Alu 239 332 0 240 191 0 0 chr2 36663030 36663077 -214024777 + (GAATG)n Simple_repeat Simple_repeat 1 47 0 1719 211 53 17 chr2 36663784 36664259 -214023595 + Charlie4a DNA MER1_type 16 507 -1 420 280 65 12 chr2 36665636 36665804 -214022050 + MIR SINE MIR 79 255 -7 1539 177 63 23 chr2 36666261 36666612 -214021242 + MLT1A1 LTR MaLR 1 365 0 287 291 0 23 chr2 36666659 36666745 -214021109 + GA-rich Low_complexity Low_complexity 4 87 0 1641 129 0 0 chr2 36667531 36667764 -214020090 - AluSg/x SINE Alu -3 307 75 202 318 57 23 chr2 36667768 36667856 -214019998 - MIR SINE MIR -85 123 33 330 285 44 36 chr2 36669628 36669765 -214018089 + L1MEc LINE L1 211 348 -6048 1792 277 77 50 chr2 36669852 36670779 -214017075 + L1MEc LINE L1 513 1488 -4908 2730 10 10 7 chr2 36670779 36671088 -214016766 + AluYa5 SINE Alu 1 310 -1 1792 277 77 50 chr2 36671088 36671492 -214016362 + L1MEc LINE L1 1488 1880 -4516 210 37 0 0 chr2 36671509 36671536 -214016318 + (CA)n Simple_repeat Simple_repeat 2 28 0 3434 231 56 27 chr2 36671695 36672950 -214014904 + L1MEc LINE L1 2145 3420 -2795 2116 129 3 0 chr2 36672950 36673244 -214014610 - AluSq SINE Alu -18 295 1 3434 231 56 27 chr2 36673244 36673382 -214014472 + L1MEc LINE L1 3420 3552 -2663 2228 171 15 6 chr2 36673405 36673942 -214013912 - L1MA9 LINE L1 -623 5689 5149 2359 165 57 90 chr2 36673945 36674580 -214013274 + L1MA9 LINE L1 5664 6277 -35 1444 237 65 40 chr2 36674618 36675191 -214012663 + L1MEc LINE L1 3599 4185 -2030 457 323 76 31 chr2 36675386 36675674 -214012180 - L1M4 LINE L1 -3642 3923 3623 393 268 121 13 chr2 36676020 36676177 -214011677 - MIR3 SINE MIR -15 193 20 307 113 32 0 chr2 36677879 36677941 -214009913 + (CA)n Simple_repeat Simple_repeat 2 65 0 426 231 77 54 chr2 36678332 36678553 -214009301 - HAL1 LINE L1 -1035 1472 1247 1611 124 8 24 chr2 36679410 36679659 -214008195 - THE1C LTR MaLR -130 245 1 4289 203 33 11 chr2 36679659 36681418 -214006436 - L1M4 LINE L1 -5651 1914 15 21 36 0 0 chr2 36681425 36681453 -214006401 + AT_rich Low_complexity Low_complexity 1 28 0 272 243 40 0 chr2 36681620 36681694 -214006160 + LTR67 LTR ERVL 399 475 -82 781 228 63 0 chr2 36683402 36683639 -214004215 - MER20B DNA MER1_type -7 776 525 841 285 19 0 chr2 36683808 36684022 -214003832 - MIR SINE MIR -22 240 23 181 319 0 28 chr2 36684040 36684112 -214003742 + MER5A DNA MER1_type 67 136 -53 372 123 0 0 chr2 36684806 36684879 -214002975 + (TTAG)n Simple_repeat Simple_repeat 1 73 0 236 135 0 0 chr2 36684885 36684922 -214002932 - Charlie8 DNA MER1_type -2264 153 117 512 222 105 0 chr2 36685210 36685363 -214002491 - MER20B DNA MER1_type -7 776 608 233 329 77 45 chr2 36685548 36685703 -214002151 + MIR SINE MIR 49 208 -54 181 153 17 153 chr2 36685795 36685821 -214002033 + MIR3 SINE MIR 135 150 -58 1188 200 62 0 chr2 36685821 36686126 -214001728 - MER33 DNA MER1_type 0 324 1 181 153 17 153 chr2 36686126 36686158 -214001696 + MIR3 SINE MIR 150 185 -23 1543 176 45 4 chr2 36688366 36688524 -213999330 - AluJb SINE Alu -21 291 116 279 104 0 0 chr2 36688524 36688572 -213999282 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1543 176 45 4 chr2 36688572 36688680 -213999174 - AluJb SINE Alu -196 116 14 21 71 0 0 chr2 36688997 36689039 -213998815 + AT_rich Low_complexity Low_complexity 1 42 0 632 344 181 35 chr2 36689048 36690423 -213997431 + L2 LINE L2 1686 3259 -54 559 264 78 84 chr2 36691574 36691908 -213995946 + MLT1I LTR MaLR 60 391 -18 2842 161 25 69 chr2 36692308 36692948 -213994906 + LTR9 LTR ERV1 1 612 0 20659 165 37 10 chr2 36694393 36700241 -213987613 - L1MA3 LINE L1 0 7724 1620 420 37 0 0 chr2 36700241 36700295 -213987559 + (TG)n Simple_repeat Simple_repeat 2 55 0 20659 165 37 10 chr2 36700295 36701948 -213985906 - L1MA3 LINE L1 -6104 1620 13 314 316 65 24 chr2 36702352 36702520 -213985334 - L1ME3A LINE L1 -8 6231 6057 1002 269 112 15 chr2 36702603 36703078 -213984776 - L1ME3A LINE L1 -202 6029 5509 1129 286 63 27 chr2 36703228 36703921 -213983933 - L1ME3A LINE L1 -2105 4110 3393 1257 289 79 37 chr2 36704046 36704975 -213982879 - L1MEc LINE L1 -3135 3080 2143 2229 233 104 46 chr2 36704980 36705607 -213982247 - MLT2F LTR ERVL 0 663 1 272 313 45 0 chr2 36705872 36706006 -213981848 - L1MEc LINE L1 -4596 1800 1661 40444 70 9 2 chr2 36706238 36712342 -213975512 - L1PA5 LINE L1 -2 6152 2 233 270 66 57 chr2 36712373 36712584 -213975270 - L1MEc LINE L1 -4935 1270 1058 306 312 89 25 chr2 36713372 36713529 -213974325 - L1MEc LINE L1 -5950 255 89 564 268 6 4 chr2 36713771 36713953 -213973901 - MIR SINE MIR -1 261 5 403 307 24 31 chr2 36713940 36714067 -213973787 + L2 LINE L2 3147 3272 0 * 346 174 28 7 chr2 36714326 36714470 -213973384 + (TA)n Simple_repeat Simple_repeat 1 147 0 356 304 193 0 chr2 36714481 36714652 -213973202 - MIR SINE MIR 0 262 59 226 311 159 26 chr2 36715143 36715294 -213972560 - L2 LINE L2 -205 3067 2897 1064 199 100 33 chr2 36715775 36716046 -213971808 + AluJo SINE Alu 17 305 -7 194 261 46 46 chr2 36719246 36719311 -213968543 - L2 LINE L2 -57 3256 3192 269 247 62 52 chr2 36719550 36719647 -213968207 - MER58B DNA MER1_type 0 341 244 326 215 51 13 chr2 36720394 36720473 -213967381 - L2 LINE L2 -40 3273 3192 660 337 21 33 chr2 36720689 36720932 -213966922 + MIR SINE MIR 8 247 -15 2253 72 41 0 chr2 36721339 36721629 -213966225 - AluSp SINE Alu -11 302 1 311 273 129 22 chr2 36722051 36722190 -213965664 - MIR SINE MIR -39 223 70 26 30 0 0 chr2 36722240 36722273 -213965581 + AT_rich Low_complexity Low_complexity 1 33 0 702 244 82 7 chr2 36722792 36723034 -213964820 - LTR16A LTR ERVL 0 453 98 614 139 24 0 chr2 36723035 36723200 -213964654 + (TA)n Simple_repeat Simple_repeat 2 170 0 216 167 0 0 chr2 36723211 36723259 -213964595 + (TA)n Simple_repeat Simple_repeat 2 49 0 1816 229 68 38 chr2 36723259 36723758 -213964096 - MLT2B3 LTR ERVL -40 514 1 1873 334 58 67 chr2 36724050 36725030 -213962824 - HERV16 LTR ERVL -384 5380 4393 2125 63 46 14 chr2 36725030 36725314 -213962540 + AluY SINE Alu 1 293 -18 321 26 0 0 chr2 36725314 36725352 -213962502 + (GGAA)n Simple_repeat Simple_repeat 2 39 0 1873 334 58 67 chr2 36725352 36726309 -213961545 - HERV16 LTR ERVL -1370 4394 3459 1930 121 67 25 chr2 36726309 36726665 -213961189 + THE1C LTR MaLR 1 371 -4 1873 334 58 67 chr2 36726665 36726905 -213960949 - HERV16 LTR ERVL -2305 3459 3219 2232 286 43 33 chr2 36726924 36727965 -213959889 - HERV16 LTR ERVL -3579 1417 330 1684 268 12 14 chr2 36728030 36728456 -213959398 - LTR16A LTR ERVL 0 450 26 1264 132 44 0 chr2 36728864 36729091 -213958763 - L1MA4 LINE L1 -50 6250 6014 644 236 11 22 chr2 36729166 36729348 -213958506 + L1M4 LINE L1 5182 5361 -785 6332 38 6 0 chr2 36729349 36730717 -213957137 - L1PA5 LINE L1 -137 6017 4645 5999 47 5 0 chr2 36730718 36731464 -213956390 + L1PA5 LINE L1 3880 4629 -1517 1059 138 0 6 chr2 36731464 36731624 -213956230 + AluSg/x SINE Alu 147 305 -5 2612 241 47 12 chr2 36731770 36732537 -213955317 + L1MC4a LINE L1 7014 7807 -1 1481 218 96 77 chr2 36733062 36733708 -213954146 + LTR1B LTR ERV1 1 658 -168 499 238 8 16 chr2 36733915 36734037 -213953817 + LTR28 LTR ERV1 896 1016 -4 221 312 43 32 chr2 36735938 36736031 -213951823 - MIR SINE MIR -115 147 54 377 232 148 32 chr2 36736337 36736492 -213951362 + MER112 DNA MER1_type 2 174 -86 333 0 0 0 chr2 36737029 36737066 -213950788 + (T)n Simple_repeat Simple_repeat 1 37 0 1788 175 0 0 chr2 36737064 36737377 -213950477 - AluJb SINE Alu 0 315 3 407 296 50 45 chr2 36738408 36738628 -213949226 - MLT1L LTR MaLR -394 221 1 1183 180 197 0 chr2 36742658 36742953 -213944901 - MER47A DNA MER2_type -1 365 2 354 115 0 0 chr2 36743348 36743409 -213944445 + (TG)n Simple_repeat Simple_repeat 2 62 0 1693 169 60 41 chr2 36743493 36743861 -213943993 - THE1C LTR MaLR 0 375 1 384 228 0 41 chr2 36744717 36744840 -213943014 - L2 LINE L2 -869 2445 2328 768 223 141 12 chr2 36745251 36745493 -213942361 - MER96B DNA MER1_type? 0 417 145 4964 310 108 34 chr2 36745638 36746306 -213941548 + L2 LINE L2 115 732 -2581 1681 180 10 13 chr2 36746306 36746606 -213941248 + AluJo SINE Alu 1 299 -13 4964 310 108 34 chr2 36746606 36748015 -213939839 + L2 LINE L2 732 2493 -820 2152 211 54 16 chr2 36748015 36748513 -213939341 + MLT2B1 LTR ERVL 4 520 0 4964 310 108 34 chr2 36748513 36749393 -213938461 + L2 LINE L2 2493 3306 -7 25 0 0 0 chr2 36749579 36749604 -213938250 + AT_rich Low_complexity Low_complexity 1 25 0 568 352 72 7 chr2 36749715 36750022 -213937832 - MER102b DNA MER1_type -14 327 1 250 302 0 0 chr2 36750344 36750407 -213937447 - L2 LINE L2 0 3313 3251 321 240 74 74 chr2 36750454 36750589 -213937265 + MLT1J LTR MaLR 27 164 -347 1267 239 56 54 chr2 36750589 36751053 -213936801 + MLT1C LTR MaLR 3 467 0 321 240 74 74 chr2 36751053 36751092 -213936762 + MLT1J LTR MaLR 163 201 -310 1125 142 44 35 chr2 36751802 36752028 -213935826 + L1PA16 LINE L1 5939 6166 0 828 295 78 21 chr2 36752484 36752886 -213934968 + MLT1K LTR MaLR 142 587 -1 225 0 0 0 chr2 36753342 36753367 -213934487 + (T)n Simple_repeat Simple_repeat 1 25 0 1281 244 79 104 chr2 36753600 36754943 -213932911 + L1MC5 LINE L1 6611 7901 -60 2068 141 36 33 chr2 36755043 36755406 -213932448 + THE1B LTR MaLR 1 364 0 1541 262 95 64 chr2 36755438 36755804 -213932050 + L2 LINE L2 2410 2763 -550 1535 194 24 10 chr2 36755804 36756092 -213931762 - AluSx SINE Alu -20 292 1 1541 262 95 64 chr2 36756092 36756140 -213931714 + L2 LINE L2 2763 2808 -505 1514 143 10 108 chr2 36756140 36756454 -213931400 + AluSx SINE Alu 15 297 -15 1541 262 95 64 chr2 36756454 36756918 -213930936 + L2 LINE L2 2808 3313 0 207 0 0 0 chr2 36757026 36757049 -213930805 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 184 311 189 0 chr2 36757055 36757129 -213930725 - L2 LINE L2 -17 3255 3168 273 339 64 0 chr2 36759699 36759808 -213928046 - MIR SINE MIR -35 227 112 716 303 84 13 chr2 36761741 36762051 -213925803 - L1MEd LINE L1 -5769 350 19 24 53 0 0 chr2 36762285 36762323 -213925531 + AT_rich Low_complexity Low_complexity 1 38 0 2510 53 0 3 chr2 36762821 36763125 -213924729 + AluY SINE Alu 1 303 -8 375 266 110 12 chr2 36764159 36764333 -213923521 + L1MC1 LINE L1 5584 5776 -345 437 232 91 0 chr2 36764746 36764845 -213923009 - MER5A DNA MER1_type -80 109 2 23 0 0 0 chr2 36765069 36765092 -213922762 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr2 36765385 36765417 -213922437 + AT_rich Low_complexity Low_complexity 1 32 0 452 302 110 16 chr2 36766787 36766969 -213920885 - MIR SINE MIR -16 246 48 25 0 0 0 chr2 36767128 36767153 -213920701 + AT_rich Low_complexity Low_complexity 1 25 0 1893 147 4 0 chr2 36767413 36767692 -213920162 - AluSx SINE Alu -30 282 3 240 290 61 69 chr2 36767857 36767988 -213919866 - L2 LINE L2 0 3313 3184 578 234 66 62 chr2 36769653 36769880 -213917974 - L1MC4 LINE L1 -4 8038 7811 1007 261 60 55 chr2 36769921 36770072 -213917782 - L1MC4 LINE L1 -317 7725 7576 2015 134 17 0 chr2 36770072 36770370 -213917484 - AluSx SINE Alu -9 303 1 1007 261 60 55 chr2 36770370 36770804 -213917050 - L1MC4 LINE L1 -466 7576 7137 657 193 6 0 chr2 36771092 36771228 -213916626 + L1MC1 LINE L1 5833 5970 -196 1443 248 137 50 chr2 36771972 36772497 -213915357 + MLT1E2 LTR MaLR 56 626 0 1641 223 25 11 chr2 36773053 36773417 -213914437 - MLT1A2 LTR MaLR -5 369 1 1067 226 68 77 chr2 36773803 36774143 -213913711 - MER58B DNA MER1_type -4 337 1 232 305 125 51 chr2 36774821 36775047 -213912807 + MIR SINE MIR 16 254 -8 292 296 124 12 chr2 36775752 36775921 -213911933 - MIR3 SINE MIR -6 202 15 658 271 12 12 chr2 36777868 36778034 -213909820 + MER5B DNA MER1_type 13 178 0 180 282 90 39 chr2 36778291 36778369 -213909485 + L2 LINE L2 3160 3241 -31 450 286 121 22 chr2 36779391 36779622 -213908232 - MLT1K LTR MaLR 0 588 335 773 249 58 5 chr2 36779846 36780035 -213907819 + MER58A DNA MER1_type 26 224 0 5279 86 1 1 chr2 36780286 36781005 -213906849 - L1PA8 LINE L1 0 6172 5454 2152 128 0 0 chr2 36782936 36783234 -213904620 - AluSx SINE Alu -12 300 3 540 104 65 5 chr2 36783305 36783691 -213904163 + (TA)n Simple_repeat Simple_repeat 1 409 0 27 62 0 0 chr2 36783692 36783740 -213904114 + AT_rich Low_complexity Low_complexity 1 48 0 607 35 71 29 chr2 36783741 36783911 -213903943 + (TA)n Simple_repeat Simple_repeat 2 178 0 630 133 45 0 chr2 36784013 36784326 -213903528 + (TA)n Simple_repeat Simple_repeat 1 327 0 37 39 0 0 chr2 36784326 36784377 -213903477 + AT_rich Low_complexity Low_complexity 1 51 0 294 29 0 0 chr2 36784505 36784540 -213903314 + (TG)n Simple_repeat Simple_repeat 1 35 0 1192 219 46 40 chr2 36784757 36784952 -213902902 - MER110A LTR ERV1 -70 398 199 2092 92 6 57 chr2 36784952 36785268 -213902586 - AluY SINE Alu -11 300 1 1192 219 46 40 chr2 36785268 36785397 -213902457 - MER110A LTR ERV1 -269 199 72 494 299 69 6 chr2 36785416 36785590 -213902264 + MIR SINE MIR 72 256 -6 26 30 0 0 chr2 36785956 36785989 -213901865 + AT_rich Low_complexity Low_complexity 1 33 0 1581 219 35 41 chr2 36786055 36786512 -213901342 + MER89 LTR ERV1 7 559 0 242 274 0 55 chr2 36787354 36787427 -213900427 + L2 LINE L2 3201 3269 -3 2524 191 123 62 chr2 36787521 36788299 -213899555 - LTR1B LTR ERV1 0 826 1 1803 107 4 29 chr2 36790712 36790993 -213896861 + AluSq SINE Alu 1 274 -39 21 0 0 0 chr2 36791991 36792012 -213895842 + AT_rich Low_complexity Low_complexity 1 21 0 1424 197 20 58 chr2 36792132 36792500 -213895354 + MLT2B1 LTR ERVL 1 355 -59 191 139 70 0 chr2 36792501 36792544 -213895310 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 333 0 0 0 chr2 36792582 36792619 -213895235 + (TG)n Simple_repeat Simple_repeat 2 38 0 1578 164 17 17 chr2 36792707 36792994 -213894860 - AluJo SINE Alu -25 287 1 990 310 58 6 chr2 36792994 36793359 -213894495 + L2 LINE L2 2193 2576 -738 890 144 41 0 chr2 36793459 36793605 -213894249 - LTR47B LTR ERVL -291 152 1 3311 193 111 38 chr2 36793643 36793946 -213893908 + Charlie1 DNA MER1_type 1704 1983 -778 261 0 0 0 chr2 36793946 36793975 -213893879 + (CTATA)n Simple_repeat Simple_repeat 5 33 0 3311 193 111 38 chr2 36793975 36794654 -213893200 + Charlie1 DNA MER1_type 1983 2758 -3 576 299 69 37 chr2 36794795 36795012 -213892842 + L2 LINE L2 2900 3123 -190 384 269 79 20 chr2 36795044 36795297 -213892557 - L1MC5 LINE L1 -65 7896 7629 471 248 80 20 chr2 36795373 36795600 -213892254 - L1ME LINE L1 -609 5949 5711 962 248 90 6 chr2 36795616 36795959 -213891895 - L1ME LINE L1 -898 5642 5271 * 1341 260 79 49 chr2 36795957 36796553 -213891301 + L1MC4 LINE L1 7427 8040 -2 298 306 65 22 chr2 36796630 36796859 -213890995 + L1ME LINE L1 5564 5802 -319 363 221 36 0 chr2 36797709 36797836 -213890018 - L1MEc LINE L1 -3907 2637 2501 968 233 8 25 chr2 36797836 36798076 -213889778 + MLT1A1 LTR MaLR 1 236 -129 1028 313 73 22 chr2 36798497 36799548 -213888306 - L1ME3A LINE L1 -279 5891 4791 586 264 46 35 chr2 36800148 36800453 -213887401 - LTR16A1 LTR ERVL 0 457 172 39 68 0 0 chr2 36800540 36800614 -213887240 + AT_rich Low_complexity Low_complexity 1 74 0 288 0 0 0 chr2 36801088 36801120 -213886734 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 351 0 0 0 chr2 36801119 36801158 -213886696 + (CA)n Simple_repeat Simple_repeat 2 40 0 35 0 0 0 chr2 36801390 36801425 -213886429 + AT_rich Low_complexity Low_complexity 1 35 0 831 74 16 8 chr2 36801425 36801547 -213886307 - L1P LINE L1 -1866 4280 4158 279 0 0 0 chr2 36801860 36801873 -213885981 + (TG)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr2 36801873 36801904 -213885950 + (TG)n Simple_repeat Simple_repeat 2 32 0 191 246 58 29 chr2 36802067 36802136 -213885718 - L2 LINE L2 -554 2760 2690 1019 340 83 18 chr2 36802292 36802919 -213884935 - L2 LINE L2 -864 2450 1783 206 352 25 37 chr2 36803170 36803332 -213884522 + L2 LINE L2 2894 3053 -219 23 0 0 0 chr2 36804727 36804750 -213883104 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 36805199 36805227 -213882627 + AT_rich Low_complexity Low_complexity 1 28 0 731 251 38 47 chr2 36805500 36805735 -213882119 + MIR SINE MIR 8 240 -22 192 77 0 0 chr2 36805741 36805767 -213882087 + (ATG)n Simple_repeat Simple_repeat 2 27 0 951 309 51 45 chr2 36805916 36806512 -213881342 + L2 LINE L2 2429 3028 -285 840 177 57 6 chr2 36806513 36806688 -213881166 + MER53 DNA DNA 1 184 -5 498 337 96 11 chr2 36806698 36806959 -213880895 + L2 LINE L2 3028 3310 -3 347 291 7 93 chr2 36807350 36807501 -213880353 + L2 LINE L2 3175 3312 -1 1027 278 82 56 chr2 36808313 36809065 -213878789 + HAL1 LINE L1 875 1646 -861 239 305 219 13 chr2 36809096 36809247 -213878607 + HAL1 LINE L1 1728 1909 -598 221 209 15 0 chr2 36809307 36809374 -213878480 + GA-rich Low_complexity Low_complexity 1 68 0 313 276 47 16 chr2 36810175 36810302 -213877552 - MIR SINE MIR -67 195 65 4632 179 50 34 chr2 36810350 36812151 -213875703 + L1MB7 LINE L1 4212 6054 -130 2105 107 0 32 chr2 36812151 36812461 -213875393 + AluSq SINE Alu 1 300 -13 4632 179 50 34 chr2 36812461 36812571 -213875283 + L1MB7 LINE L1 6054 6161 -23 184 71 36 0 chr2 36813051 36813079 -213874775 - MER5B DNA MER1_type -138 40 12 183 323 109 52 chr2 36813462 36813654 -213874200 - MIR SINE MIR -29 233 31 2707 120 26 0 chr2 36814538 36814955 -213872899 - MSTA LTR MaLR 0 428 1 214 301 14 27 chr2 36815058 36815131 -213872723 + MER5A DNA MER1_type 7 78 -111 814 167 0 53 chr2 36815140 36815290 -213872564 + FRAM SINE Alu 11 152 -24 375 41 0 0 chr2 36815303 36815352 -213872502 + (CA)n Simple_repeat Simple_repeat 2 50 0 704 321 5 9 chr2 36816430 36816645 -213871209 - MIR SINE MIR -29 233 20 621 264 54 91 chr2 36816839 36816945 -213870909 - MLT1L LTR MaLR -224 391 283 2532 63 3 0 chr2 36816945 36817247 -213870607 - AluSp SINE Alu -8 305 3 621 264 54 91 chr2 36817247 36817546 -213870308 - MLT1L LTR MaLR -332 283 1 1997 139 0 0 chr2 36817707 36818014 -213869840 - AluSx SINE Alu 0 310 4 283 311 49 25 chr2 36818807 36818929 -213868925 - MIR3 SINE MIR -3 205 81 28 0 0 0 chr2 36820136 36820164 -213867690 + AT_rich Low_complexity Low_complexity 1 28 0 309 265 70 30 chr2 36820392 36820536 -213867318 - L1MC/D LINE L1 -925 5434 5287 23 54 0 0 chr2 36820841 36820878 -213866976 + AT_rich Low_complexity Low_complexity 1 37 0 1299 271 121 13 chr2 36821150 36821612 -213866242 + LTR33 LTR ERVL 8 519 -2 394 316 134 40 chr2 36821644 36822478 -213865376 - L1MC/D LINE L1 -1533 4613 3692 390 313 94 26 chr2 36823174 36823557 -213864297 - HAL1 LINE L1 -938 1569 1161 501 17 0 0 chr2 36825354 36825412 -213862442 + (TG)n Simple_repeat Simple_repeat 1 58 0 463 119 71 0 chr2 36825722 36825806 -213862048 + MER53 DNA DNA 94 183 -6 408 300 101 77 chr2 36828030 36828277 -213859577 + MIR SINE MIR 9 261 -1 199 248 148 101 chr2 36831004 36831106 -213856748 + MER5B DNA MER1_type 21 134 -44 1461 193 66 7 chr2 36831106 36831380 -213856474 - AluJo SINE Alu -22 290 1 199 248 148 101 chr2 36831380 36831426 -213856428 + MER5B DNA MER1_type 134 176 -2 1286 124 38 61 chr2 36831444 36831716 -213856138 + Tigger4(Zombi) DNA MER2_type 1 2731 0 1311 212 96 79 chr2 36832545 36832658 -213855196 - MLT1D LTR MaLR 0 626 516 2042 153 0 0 chr2 36832658 36832965 -213854889 + AluSg SINE Alu 3 309 -1 1311 212 96 79 chr2 36832965 36833437 -213854417 - MLT1D LTR MaLR -110 516 13 1018 67 0 0 chr2 36833955 36834090 -213853764 + L1PA7 LINE L1 6020 6154 0 392 352 49 16 chr2 36834263 36834709 -213853145 + L1ME LINE L1 5354 5814 -307 6793 131 36 20 chr2 36834979 36836141 -213851713 - L1P LINE L1 -3281 2865 1685 1618 156 58 35 chr2 36836243 36836590 -213851264 - LTR49-int LTR ERV1 -689 5642 5288 3604 107 12 43 chr2 36836690 36837332 -213850522 + L1PA8 LINE L1 5563 6185 0 205 342 81 18 chr2 36837333 36837444 -213850410 + L2 LINE L2 2703 2820 -494 535 355 63 31 chr2 36837540 36837858 -213849996 + L2 LINE L2 2945 3272 0 453 267 164 35 chr2 36837979 36838211 -213849643 + MIR SINE MIR 1 262 0 28949 36 4 1 chr2 36838944 36844476 -213843378 + L1PA3 LINE L1 606 6147 -8 30 0 0 0 chr2 36844476 36844506 -213843348 + AT_rich Low_complexity Low_complexity 1 30 0 520 234 117 51 chr2 36845012 36845209 -213842645 + MIR SINE MIR 47 256 -6 455 346 41 1 chr2 36845348 36845517 -213842337 + MIR SINE MIR 37 210 -52 2028 133 0 41 chr2 36845628 36845945 -213841909 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr2 36846057 36846078 -213841776 + AT_rich Low_complexity Low_complexity 1 21 0 220 377 36 22 chr2 36846530 36846668 -213841186 + MIR3 SINE MIR 6 145 -63 12475 40 2 0 chr2 36846677 36848284 -213839570 - L1P LINE L1 -3220 2926 1317 12097 18 10 7 chr2 36848285 36850451 -213837403 + L1PA4 LINE L1 3987 6155 0 360 371 11 6 chr2 36850603 36850778 -213837076 - MIR SINE MIR -5 257 82 5843 141 20 15 chr2 36851414 36852559 -213835295 - L1MA4A LINE L1 -6 6297 5144 222 164 0 36 chr2 36853163 36853218 -213834636 + CT-rich Low_complexity Low_complexity 4 56 0 348 299 24 0 chr2 36853703 36853830 -213834024 + L1ME4a LINE L1 5740 5869 -252 11169 122 12 2 chr2 36853851 36856319 -213831535 - L1HS LINE L1 0 6155 3661 1429 111 0 18 chr2 36856322 36856547 -213831307 - pTR5 LTR ERV1 -2046 392 172 316 220 11 0 chr2 36856550 36856641 -213831213 - LTR30 LTR ERV1 -80 642 551 4816 117 141 24 chr2 36856641 36857716 -213830138 - pTR5 LTR ERV1 -406 2032 743 14538 141 21 47 chr2 36857718 36861570 -213826284 - L1P3 LINE L1 -2487 3974 217 1984 138 0 0 chr2 36861601 36861904 -213825950 + AluSx SINE Alu 7 309 0 796 280 93 108 chr2 36861917 36862881 -213824973 - L2 LINE L2 -613 2701 1752 1034 214 108 35 chr2 36863595 36863992 -213823862 + L1MC4 LINE L1 6660 7085 -957 1961 225 60 13 chr2 36864034 36864629 -213823225 + L1MC4 LINE L1 7275 7897 -145 310 286 54 81 chr2 36864731 36864916 -213822938 - MIR SINE MIR -26 236 57 329 242 0 0 chr2 36865085 36865151 -213822703 - MIR SINE MIR -144 118 53 537 271 220 5 chr2 36865540 36865754 -213822100 + MIR SINE MIR 3 262 0 316 308 216 30 chr2 36865754 36866193 -213821661 - L2 LINE L2 -647 2667 2147 537 282 38 19 chr2 36867898 36868111 -213819743 + MIR SINE MIR 22 238 -24 201 241 0 69 chr2 36869192 36869308 -213818546 + T-rich Low_complexity Low_complexity 2 109 0 193 319 96 64 chr2 36870662 36870819 -213817035 - MIR SINE MIR -89 173 12 207 0 0 0 chr2 36871491 36871514 -213816340 + (A)n Simple_repeat Simple_repeat 1 23 0 349 232 20 0 chr2 36873934 36874033 -213813821 - L1ME4a LINE L1 -35 6086 5986 765 33 0 0 chr2 36874034 36874126 -213813728 + (CATATA)n Simple_repeat Simple_repeat 5 96 0 340 291 109 6 chr2 36874251 36874416 -213813438 - L1ME4a LINE L1 -399 5722 5541 203 267 13 27 chr2 36876623 36876698 -213811156 + GA-rich Low_complexity Low_complexity 1 74 0 347 272 0 0 chr2 36877686 36877767 -213810087 + MER96 DNA MER1_type? 1 81 -94 220 196 87 0 chr2 36878068 36878114 -213809740 + MIR3 SINE MIR 133 182 -26 1848 163 10 3 chr2 36878564 36878852 -213809002 - AluJb SINE Alu -11 301 12 3119 159 18 5 chr2 36879082 36880034 -213807820 - L1MA5A LINE L1 -462 5835 4872 422 125 10 87 chr2 36880135 36880239 -213807615 - L1MA5A LINE L1 -1688 4458 4363 211 250 0 33 chr2 36880284 36880344 -213807510 + L2 LINE L2 3212 3269 -3 2074 141 36 33 chr2 36880354 36880717 -213807137 + THE1B LTR MaLR 1 364 0 22 35 0 0 chr2 36881136 36881165 -213806689 + AT_rich Low_complexity Low_complexity 1 29 0 7548 38 1 0 chr2 36882916 36884566 -213803288 - L1PA4 LINE L1 -11 6144 4467 344 289 0 0 chr2 36884700 36884790 -213803064 + L1MC4 LINE L1 6614 6703 -1339 387 246 0 3 chr2 36884790 36885403 -213802451 + (TA)n Simple_repeat Simple_repeat 1 610 0 295 267 0 0 chr2 36885414 36885687 -213802167 + (TA)n Simple_repeat Simple_repeat 1 273 0 294 266 0 0 chr2 36885702 36885879 -213801975 + (TA)n Simple_repeat Simple_repeat 1 177 0 219 283 0 0 chr2 36885894 36886071 -213801783 + (TA)n Simple_repeat Simple_repeat 1 177 0 387 246 0 0 chr2 36886096 36886275 -213801579 + (TA)n Simple_repeat Simple_repeat 1 179 0 207 256 0 0 chr2 36886286 36886403 -213801451 + (TA)n Simple_repeat Simple_repeat 1 117 0 387 237 0 0 chr2 36886418 36886595 -213801259 + (TA)n Simple_repeat Simple_repeat 1 177 0 7380 28 2 2 chr2 36887904 36889471 -213798383 - L1PA4 LINE L1 -11 6144 4568 28906 32 19 1 chr2 36889572 36894782 -213793072 - L1P LINE L1 -813 5333 1 307 246 189 0 chr2 36894804 36894926 -213792928 + L1ME4a LINE L1 5904 6048 -73 2376 221 58 39 chr2 36895253 36896031 -213791823 - L1MC4a LINE L1 -392 7416 6624 420 295 35 12 chr2 36896509 36896682 -213791172 - L1MCc LINE L1 -6224 199 23 6317 155 10 10 chr2 36896728 36897927 -213789927 - L1P LINE L1 -2546 3600 2402 983 179 167 58 chr2 36897940 36898270 -213789584 - LTR18B LTR ERVL -248 366 1 4585 259 62 13 chr2 36898270 36899714 -213788140 - L1PA12 LINE L1 -6063 1518 5 339 240 6 101 chr2 36901356 36901535 -213786319 - MER112 DNA MER1_type -6 254 93 280 333 74 39 chr2 36902284 36902542 -213785312 + L2 LINE L2 2709 2975 -339 297 285 215 0 chr2 36902938 36903063 -213784791 + MIR SINE MIR 105 258 0 498 122 0 24 chr2 36903063 36903145 -213784709 - MADE1 DNA Mariner 0 80 1 572 263 17 23 chr2 36903563 36903738 -213784116 + MIR3 SINE MIR 28 201 -7 808 279 184 2 chr2 36903798 36904210 -213783644 - LTR33 LTR ERVL -24 497 11 2314 75 6 43 chr2 36905635 36905957 -213781897 + AluSx SINE Alu 3 312 0 2305 99 7 0 chr2 36906144 36906447 -213781407 - AluY SINE Alu -6 305 1 436 265 66 30 chr2 36907317 36907483 -213780371 - MER20B DNA MER1_type -611 172 1 244 333 119 0 chr2 36908092 36908176 -213779678 + L2 LINE L2 3169 3262 -10 208 315 123 0 chr2 36909410 36909540 -213778314 + MIR SINE MIR 117 262 0 233 408 8 8 chr2 36909902 36910022 -213777832 + MIR SINE MIR 20 139 -123 472 127 13 0 chr2 36910192 36910271 -213777583 + MADE1 DNA Mariner 1 80 0 308 343 41 18 chr2 36910306 36910475 -213777379 + MIR3 SINE MIR 31 203 -5 2075 175 117 47 chr2 36910548 36910680 -213777174 - L1MD3 LINE L1 -10 7985 7864 2534 190 32 48 chr2 36910680 36911243 -213776611 + MLT2B3 LTR ERVL 1 554 0 2075 175 117 47 chr2 36911243 36911658 -213776196 - L1MD3 LINE L1 -131 7864 7400 440 204 11 0 chr2 36911660 36911753 -213776101 - MLT1F1 LTR MaLR -448 119 26 654 270 109 15 chr2 36912283 36912550 -213775304 + MLT1J2 LTR MaLR 155 446 -4 476 191 0 38 chr2 36913248 36913353 -213774501 + MLT1F1 LTR MaLR 24 124 -443 1407 129 4 9 chr2 36913358 36913583 -213774271 + L1MD3 LINE L1 7407 7630 -365 561 211 81 0 chr2 36914828 36914951 -213772903 + MER94 DNA DNA 2 134 0 181 250 0 0 chr2 36915072 36915112 -213772742 + MIR SINE MIR 1 40 -222 670 292 50 5 chr2 36915173 36915392 -213772462 + MIR SINE MIR 31 259 -3 300 284 84 52 chr2 36916303 36916458 -213771396 - MIR SINE MIR -7 255 96 2336 71 0 7 chr2 36917052 36917338 -213770516 + AluY SINE Alu 1 286 -25 225 0 0 0 chr2 36917338 36917363 -213770491 + (TTAAA)n Simple_repeat Simple_repeat 3 27 0 318 284 118 0 chr2 36917376 36917503 -213770351 - MIR SINE MIR -1 261 120 495 333 56 4 chr2 36917639 36917873 -213769981 - MIR SINE MIR -12 250 5 21 57 0 0 chr2 36918130 36918165 -213769689 + AT_rich Low_complexity Low_complexity 1 35 0 1571 223 17 11 chr2 36918255 36918614 -213769240 + MLT1A1 LTR MaLR 5 365 0 2492 88 23 0 chr2 36918673 36919024 -213768830 - L1PA11 LINE L1 0 6174 5816 511 320 87 55 chr2 36919141 36919736 -213768118 - L1MEd LINE L1 -987 1503 806 758 232 12 6 chr2 36920404 36920568 -213767286 + MER45A DNA AcHobo 7 171 -7 363 78 0 0 chr2 36921092 36921143 -213766711 + (TG)n Simple_repeat Simple_repeat 2 52 0 23 0 0 0 chr2 36921422 36921445 -213766409 + AT_rich Low_complexity Low_complexity 1 23 0 516 281 13 20 chr2 36921937 36922090 -213765764 - MIR SINE MIR -109 153 2 992 230 79 7 chr2 36922147 36922438 -213765416 - MLT1A1 LTR MaLR 0 365 54 199 326 146 0 chr2 36922638 36922727 -213765127 + L2 LINE L2 3204 3305 -8 1477 118 151 0 chr2 36922735 36923028 -213764826 - AluSx SINE Alu 0 330 1 244 310 70 0 chr2 36923041 36923112 -213764742 + MIR3 SINE MIR 85 160 -48 347 313 66 6 chr2 36923112 36923278 -213764576 - MER5B DNA MER1_type 0 178 3 194 234 0 43 chr2 36923283 36923330 -213764524 + MER5A DNA MER1_type 2 46 -143 363 287 47 16 chr2 36924406 36924535 -213763319 + MIR SINE MIR 56 188 -74 1253 181 15 5 chr2 36924557 36924762 -213763092 + AluJo SINE Alu 91 297 -15 2433 96 6 16 chr2 36924801 36925165 -213762689 - L1PB2 LINE L1 -9 6142 5783 1255 128 0 5 chr2 36925254 36925449 -213762405 - L1PA16 LINE L1 -9 6157 5964 597 221 97 41 chr2 36925564 36925759 -213762095 + MER63A DNA MER1_type 4 209 -1 364 283 54 73 chr2 36925954 36926159 -213761695 - MIR3 SINE MIR -7 201 1 4205 108 32 61 chr2 36926273 36927076 -213760778 + L1PA15 LINE L1 5386 6165 0 180 0 0 0 chr2 36927142 36927162 -213760692 + (T)n Simple_repeat Simple_repeat 1 20 0 27 29 0 0 chr2 36927365 36927399 -213760455 + AT_rich Low_complexity Low_complexity 1 34 0 2471 292 123 51 chr2 36927400 36929212 -213758642 - L2 LINE L2 -25 3288 1295 586 277 58 10 chr2 36929212 36929418 -213758436 - L2 LINE L2 -2552 762 547 216 184 0 0 chr2 36929507 36929556 -213758298 + (CA)n Simple_repeat Simple_repeat 2 50 0 201 266 32 82 chr2 36930025 36930037 -213757817 + L2 LINE L2 2163 2174 -1140 323 194 13 191 chr2 36930037 36930346 -213757508 - MER112 DNA MER1_type -2 254 1 201 266 32 82 chr2 36930346 36930491 -213757363 + L2 LINE L2 2174 2312 -1002 915 122 0 0 chr2 36930877 36931016 -213756838 - L1PA11 LINE L1 -1 6173 6035 195 293 17 0 chr2 36931098 36931156 -213756698 + L2 LINE L2 3212 3270 -2 320 241 78 78 chr2 36932582 36932698 -213755156 + MIR SINE MIR 1 116 -146 2255 120 0 0 chr2 36932747 36933048 -213754806 + AluSx SINE Alu 1 301 -11 282 233 27 14 chr2 36933067 36933140 -213754714 + L1MDa LINE L1 19 92 -6448 378 260 85 6 chr2 36933186 36933363 -213754491 + L1MB3 LINE L1 5121 5311 -835 1807 137 145 14 chr2 36933363 36933729 -213754125 - MSTA LTR MaLR 0 428 15 320 199 143 0 chr2 36933782 36933888 -213753966 + L1MD2 LINE L1 6194 7953 -42 21 0 0 0 chr2 36933926 36933947 -213753907 + AT_rich Low_complexity Low_complexity 1 21 0 313 272 54 0 chr2 36933960 36934052 -213753802 + MIR SINE MIR 140 236 -26 2171 169 44 108 chr2 36934602 36935213 -213752641 - L1MD3 LINE L1 -26 7969 7398 360 152 63 25 chr2 36935211 36935290 -213752564 - L1MC4 LINE L1 -1258 6784 6703 * 230 191 48 0 chr2 36935292 36935355 -213752499 + L1ME4a LINE L1 6025 6090 -31 514 194 24 8 chr2 36935366 36935490 -213752364 - MLT1D LTR MaLR -7 498 373 1207 115 6 17 chr2 36935492 36935666 -213752188 - AluSx SINE Alu -140 172 1 756 182 6 23 chr2 36935758 36935934 -213751920 + L1MA10 LINE L1 6160 6332 -2 432 264 114 33 chr2 36936443 36936716 -213751138 + L1MB3 LINE L1 5524 5818 -303 484 208 60 20 chr2 36936845 36936994 -213750860 + MER104 DNA Tc2 1 155 -25 449 286 94 79 chr2 36937933 36938412 -213749442 + MLT1J LTR MaLR 26 511 0 2522 73 0 0 chr2 36938573 36938875 -213748979 - AluSg SINE Alu -8 302 1 2424 88 0 0 chr2 36939397 36939693 -213748161 - AluSg SINE Alu -14 296 1 28 0 0 0 chr2 36940712 36940740 -213747114 + AT_rich Low_complexity Low_complexity 1 28 0 2272 88 14 0 chr2 36941193 36941490 -213746364 + AluY SINE Alu 1 301 -10 209 231 0 0 chr2 36942071 36942110 -213745744 + (TG)n Simple_repeat Simple_repeat 2 40 0 1423 169 24 14 chr2 36942129 36942425 -213745429 + L1MB3 LINE L1 5885 6183 0 196 331 49 25 chr2 36942478 36942641 -213745213 - L2 LINE L2 -534 2780 2614 333 42 21 0 chr2 36943511 36943559 -213744295 + L1PA3 LINE L1 6107 6155 0 183 42 0 0 chr2 36943618 36943642 -213744212 + (CA)n Simple_repeat Simple_repeat 1 24 0 239 240 40 30 chr2 36943909 36944009 -213743845 - L1ME LINE L1 -283 5881 5781 1873 135 14 27 chr2 36944840 36945136 -213742718 + AluJb SINE Alu 1 292 -20 920 244 54 27 chr2 36946649 36946944 -213740910 + L1ME1 LINE L1 5641 5943 -223 960 217 112 34 chr2 36947452 36947913 -213739941 + MLT1E LTR MaLR 1 593 0 347 344 96 0 chr2 36948463 36948588 -213739266 + L2 LINE L2 2920 3056 -257 207 322 34 42 chr2 36948732 36948850 -213739004 + L2 LINE L2 3196 3312 -1 195 175 75 0 chr2 36948897 36948937 -213738917 + MIR SINE MIR 33 75 -133 893 249 9 14 chr2 36951090 36951307 -213736547 + MER20B DNA MER1_type 4 219 0 378 272 44 4 chr2 36951728 36951883 -213735971 - MIR SINE MIR -34 228 4 344 339 9 9 chr2 36952256 36952368 -213735486 - L2 LINE L2 -1 3271 3160 2297 79 0 16 chr2 36952712 36953016 -213734838 + AluY SINE Alu 1 299 -12 8935 24 0 271 chr2 36955517 36957419 -213730435 + SVA Other Other 1 1386 0 254 88 0 0 chr2 36957526 36957560 -213730294 - MLT1C LTR MaLR 0 467 434 * 367 203 13 0 chr2 36957558 36957637 -213730217 - MLT1B LTR MaLR -277 113 34 529 322 23 0 chr2 36957901 36958075 -213729779 + MIR SINE MIR 14 191 -71 270 160 0 0 chr2 36958083 36958133 -213729721 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 192 40 0 0 chr2 36958133 36958158 -213729696 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 375 195 0 0 chr2 36958157 36958280 -213729574 + (TA)n Simple_repeat Simple_repeat 1 123 0 317 284 23 0 chr2 36958285 36958373 -213729481 + L1MC4 LINE L1 6614 6703 -1339 183 100 0 0 chr2 36958380 36958410 -213729444 + (TA)n Simple_repeat Simple_repeat 1 30 0 607 245 44 0 chr2 36958565 36958724 -213729130 + MER20B DNA MER1_type 36 201 -582 292 326 44 15 chr2 36958747 36958882 -213728972 + MER91C DNA MER1_type 2 140 0 583 209 50 22 chr2 36958883 36959065 -213728789 + MER20B DNA MER1_type 216 402 -381 834 242 92 64 chr2 36959066 36959459 -213728395 - LTR41 LTR ERVL -1 772 369 1224 230 26 4 chr2 36959462 36959732 -213728122 + AluJo SINE Alu 1 276 -36 201 39 0 0 chr2 36959739 36959765 -213728089 + (CA)n Simple_repeat Simple_repeat 2 27 0 364 268 6 76 chr2 36959765 36959922 -213727932 - LTR41 LTR ERVL -398 375 230 812 252 161 3 chr2 36959922 36960208 -213727646 - LTR41 LTR ERVL -442 331 1 525 233 161 33 chr2 36960217 36960474 -213727380 + MER20B DNA MER1_type 405 715 -68 2377 120 14 19 chr2 36960474 36960840 -213727014 - THE1B LTR MaLR 0 364 1 525 233 161 33 chr2 36960840 36960912 -213726942 + MER20B DNA MER1_type 715 776 -7 456 229 169 0 chr2 36960938 36961056 -213726798 - L2 LINE L2 -546 2768 2631 1091 275 126 7 chr2 36961057 36961461 -213726393 - LTR33 LTR ERVL -2 519 68 2386 101 0 0 chr2 36961575 36961883 -213725971 + AluSx SINE Alu 1 308 -4 2482 30 0 10 chr2 36962248 36962550 -213725304 + L1PA4 LINE L1 5855 6153 -2 217 341 185 15 chr2 36962612 36962747 -213725107 + L3 LINE CR1 1414 1571 -6 1863 199 25 32 chr2 36963167 36963599 -213724255 - MLT1D LTR MaLR -74 431 3 907 253 54 74 chr2 36963773 36963924 -213723930 + MLT1I LTR MaLR 3 155 -254 2357 102 0 0 chr2 36963924 36964227 -213723627 - AluSq SINE Alu -10 303 1 907 253 54 74 chr2 36964227 36964482 -213723372 + MLT1I LTR MaLR 155 401 -8 27 0 0 0 chr2 36966515 36966542 -213721312 + AT_rich Low_complexity Low_complexity 1 27 0 267 31 0 0 chr2 36966914 36966946 -213720908 + (TG)n Simple_repeat Simple_repeat 1 32 0 324 333 50 35 chr2 36967060 36967201 -213720653 + MIR3 SINE MIR 6 148 -60 282 336 53 15 chr2 36967480 36967611 -213720243 + L2 LINE L2 3124 3259 -13 425 287 9 9 chr2 36967804 36967919 -213719935 - L3b LINE CR1 -358 1225 1111 29 78 0 0 chr2 36968508 36968572 -213719282 + AT_rich Low_complexity Low_complexity 1 64 0 1139 108 76 16 chr2 36968575 36968760 -213719094 - L1PB1 LINE L1 -7 6144 5949 22 35 0 0 chr2 36969330 36969359 -213718495 + AT_rich Low_complexity Low_complexity 1 29 0 1543 248 11 36 chr2 36969374 36969842 -213718012 - MLT2B1 LTR ERVL -64 456 1 2816 155 83 8 chr2 36970419 36971314 -213716540 - L1MB7 LINE L1 -12 6172 5164 334 174 0 54 chr2 36971320 36971412 -213716442 - FLAM_A SINE Alu 0 133 47 300 130 3 32 chr2 36971412 36971493 -213716361 - L1MB7 LINE L1 -981 5165 5087 3514 247 70 5 chr2 36971500 36972428 -213715426 - L1M4b LINE L1 -5836 1023 36 285 226 16 0 chr2 36972703 36972765 -213715089 + Charlie8 DNA MER1_type 1366 1428 -989 24 0 0 0 chr2 36973048 36973072 -213714782 + AT_rich Low_complexity Low_complexity 1 24 0 374 330 144 5 chr2 36973894 36974082 -213713772 + MIR SINE MIR 23 236 -26 918 185 36 0 chr2 36974493 36974688 -213713166 + MER3 DNA MER1_type 1 202 -7 370 295 0 0 chr2 36976218 36976357 -213711497 + (TA)n Simple_repeat Simple_repeat 2 140 0 331 267 0 22 chr2 36976358 36976448 -213711406 - L1MC4 LINE L1 -1340 6702 6615 351 273 23 0 chr2 36976455 36976543 -213711311 - L1MC4 LINE L1 -1339 6703 6614 301 222 0 16 chr2 36976523 36976586 -213711268 - L1MCa LINE L1 -4359 1770 1709 * 1107 56 0 28 chr2 36976702 36976846 -213711008 - AluSg SINE Alu -170 140 1 563 331 98 80 chr2 36977168 36977446 -213710408 + L2 LINE L2 2181 2453 -861 4591 173 16 13 chr2 36977446 36978348 -213709506 - L1MC2 LINE L1 -9 6335 5432 563 331 98 80 chr2 36978348 36978766 -213709088 + L2 LINE L2 2453 2889 -425 23 54 0 0 chr2 36979077 36979114 -213708740 + AT_rich Low_complexity Low_complexity 1 37 0 257 304 0 0 chr2 36979115 36979184 -213708670 + L2 LINE L2 3242 3310 -3 2308 107 0 0 chr2 36979430 36979729 -213708125 - AluSc SINE Alu -10 299 1 28 0 0 0 chr2 36980089 36980117 -213707737 + AT_rich Low_complexity Low_complexity 1 28 0 314 345 72 72 chr2 36982111 36982627 -213705227 - L2 LINE L2 -541 2773 2258 1419 169 38 35 chr2 36984477 36984662 -213703192 - Charlie5 DNA MER1_type -4 2620 2437 1539 208 0 14 chr2 36984662 36984951 -213702903 - AluJo SINE Alu 0 312 28 1419 169 38 35 chr2 36984951 36985137 -213702717 - Charlie5 DNA MER1_type -187 2437 2248 21 0 0 0 chr2 36985816 36985837 -213702017 + AT_rich Low_complexity Low_complexity 1 21 0 361 250 33 22 chr2 36986150 36986242 -213701612 + MIR SINE MIR 13 105 -157 394 312 54 40 chr2 36986402 36986644 -213701210 + L2 LINE L2 2787 3032 -281 26545 40 2 1 chr2 36986745 36990544 -213697310 - L1P2 LINE L1 -401 5754 1955 323 308 60 34 chr2 36991662 36991779 -213696075 - L2 LINE L2 0 3272 3153 302 277 0 92 chr2 36991978 36992119 -213695735 - L1MCa LINE L1 -5130 989 862 488 330 104 56 chr2 36992198 36992592 -213695262 - L1MCa LINE L1 -5386 733 321 345 342 99 26 chr2 36992592 36992896 -213694958 + L2 LINE L2 2947 3272 -41 231 222 0 0 chr2 36993325 36993379 -213694475 + A-rich Low_complexity Low_complexity 1 54 0 298 175 120 66 chr2 36995455 36995582 -213692272 - MIR SINE MIR -83 179 39 345 24 0 0 chr2 36995876 36995918 -213691936 + (CA)n Simple_repeat Simple_repeat 1 42 0 437 189 11 0 chr2 36995947 36996042 -213691812 + CT-rich Low_complexity Low_complexity 2 97 0 841 75 5 54 chr2 36996046 36996232 -213691622 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 273 256 15 15 chr2 36996234 36996371 -213691483 + CT-rich Low_complexity Low_complexity 4 140 0 3084 58 20 0 chr2 36996577 36997019 -213690835 + L1PA7 LINE L1 5738 6187 0 183 80 0 0 chr2 36998178 36998203 -213689651 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 949 239 50 17 chr2 37000485 37000723 -213687131 + L1PA13 LINE L1 54 299 -6540 * 3684 235 27 24 chr2 37000706 37001759 -213686095 + L1PA13 LINE L1 1668 2723 -4126 5594 121 12 18 chr2 37001784 37003130 -213684724 + L1PA15 LINE L1 4823 6164 -1 723 209 222 20 chr2 37003513 37003703 -213684151 - MLT1A2 LTR MaLR -19 355 205 186 43 0 0 chr2 37003703 37003726 -213684128 + (TTC)n Simple_repeat Simple_repeat 1 23 0 723 209 222 20 chr2 37003726 37003832 -213684022 - MLT1A2 LTR MaLR -169 205 15 2065 128 60 23 chr2 37004142 37004493 -213683361 + THE1B LTR MaLR 1 364 0 185 358 0 12 chr2 37004541 37004622 -213683232 + L2 LINE L2 3234 3313 0 804 190 50 0 chr2 37004628 37004828 -213683026 - L1MC3 LINE L1 -1 7784 7575 793 154 109 17 chr2 37004831 37004974 -213682880 - L1MA9 LINE L1 -1 6311 6148 396 0 0 0 chr2 37004974 37005018 -213682836 + (TG)n Simple_repeat Simple_repeat 1 44 0 793 154 109 17 chr2 37005018 37005049 -213682805 - L1MA9 LINE L1 -164 6148 6121 663 160 0 46 chr2 37005089 37005220 -213682634 + L1MA9 LINE L1 6004 6128 -184 1987 134 3 3 chr2 37005230 37005522 -213682332 - AluSg SINE Alu -16 294 3 3161 178 16 16 chr2 37005526 37006165 -213681689 - L1MC3 LINE L1 -199 7586 6948 316 244 23 35 chr2 37006379 37006465 -213681389 - MIR3 SINE MIR -15 193 109 346 332 207 26 chr2 37006668 37007330 -213680524 - L2 LINE L2 -601 2713 1932 2065 125 0 26 chr2 37009961 37010272 -213677582 - AluSx SINE Alu -3 309 7 509 148 0 10 chr2 37011229 37011330 -213676524 + (TTCC)n Simple_repeat Simple_repeat 3 102 0 273 310 23 0 chr2 37011739 37011826 -213676028 - MIR SINE MIR -65 197 109 7980 200 78 77 chr2 37012865 37014823 -213673031 + L1MC3 LINE L1 5169 7217 -568 296 264 11 22 chr2 37014823 37014914 -213672940 + MLT1F1 LTR MaLR 35 124 -443 7980 200 78 77 chr2 37014914 37015484 -213672370 + L1MC3 LINE L1 7217 7785 0 2878 133 2 0 chr2 37015737 37016172 -213671682 - L1PA16 LINE L1 -17 6149 5714 21 0 0 0 chr2 37016711 37016732 -213671122 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr2 37017480 37017523 -213670331 + AT_rich Low_complexity Low_complexity 1 43 0 667 286 16 22 chr2 37018413 37018598 -213669256 - MIR SINE MIR -42 220 37 248 225 0 0 chr2 37018675 37018746 -213669108 + A-rich Low_complexity Low_complexity 3 73 0 449 247 224 12 chr2 37019099 37019269 -213668585 - L2 LINE L2 -5 3308 3103 2148 186 56 34 chr2 37019269 37019737 -213668117 + MLT2B1 LTR ERVL 1 478 -42 210 191 0 0 chr2 37019737 37019784 -213668070 + (CCTA)n Simple_repeat Simple_repeat 1 47 0 515 67 27 0 chr2 37019790 37019865 -213667989 + (TCCA)n Simple_repeat Simple_repeat 4 80 0 1367 191 66 0 chr2 37019912 37020168 -213667686 + AluJo SINE Alu 1 273 -39 453 19 0 0 chr2 37020176 37020230 -213667624 + (CA)n Simple_repeat Simple_repeat 1 54 0 2032 265 80 52 chr2 37020291 37021205 -213666649 - L2 LINE L2 -870 2444 1506 333 244 267 15 chr2 37021732 37021867 -213665987 + MIR3 SINE MIR 16 184 -24 26 0 0 0 chr2 37022439 37022465 -213665389 + AT_rich Low_complexity Low_complexity 1 26 0 763 297 26 0 chr2 37022796 37022991 -213664863 + MIR SINE MIR 59 258 -4 249 33 0 0 chr2 37023014 37023044 -213664810 + (ATG)n Simple_repeat Simple_repeat 3 32 0 637 294 75 14 chr2 37023134 37023413 -213664441 - MER102a DNA MER1_type -1 329 34 3624 121 28 31 chr2 37023561 37024197 -213663657 + L1MA7 LINE L1 5656 6289 -2 811 244 21 4 chr2 37024200 37024434 -213663420 - L1M4 LINE L1 -3273 2873 2636 199 297 88 33 chr2 37025620 37025711 -213662143 + L2 LINE L2 3210 3305 -8 237 224 0 35 chr2 37026038 37026096 -213661758 - MER96B DNA MER1_type? -325 92 37 198 0 0 0 chr2 37026336 37026358 -213661496 + (TTA)n Simple_repeat Simple_repeat 3 24 0 1198 163 10 5 chr2 37026576 37026772 -213661082 - AluJo SINE Alu -60 252 56 309 103 0 0 chr2 37026816 37026855 -213660999 - AluJo SINE Alu -251 51 13 325 260 81 49 chr2 37027628 37027751 -213660103 + MIR SINE MIR 16 142 -66 217 333 0 0 chr2 37028025 37028088 -213659766 + CT-rich Low_complexity Low_complexity 4 66 0 2157 104 0 13 chr2 37028228 37028526 -213659328 - AluSq SINE Alu -17 296 3 2661 128 34 18 chr2 37028545 37029045 -213658809 - L1MA4 LINE L1 -6 6294 5787 1237 189 24 12 chr2 37029056 37029304 -213658550 - MLT1A1 LTR MaLR -112 253 3 311 234 47 55 chr2 37029304 37029432 -213658422 - L1MEd LINE L1 -3201 2928 2802 906 196 0 0 chr2 37029432 37029590 -213658264 - AluJb SINE Alu -11 301 144 1211 286 77 19 chr2 37029591 37029947 -213657907 - L1MEd LINE L1 -3320 2809 2475 2313 112 0 0 chr2 37029947 37030243 -213657611 - AluSq SINE Alu -17 296 1 1211 286 77 19 chr2 37030243 37030564 -213657290 - L1MEd LINE L1 -3654 2475 2093 6859 126 54 19 chr2 37030578 37031767 -213656087 - Tigger3b DNA MER2_type 0 1231 1 192 77 0 0 chr2 37031927 37031953 -213655901 + (TATG)n Simple_repeat Simple_repeat 3 28 0 541 306 54 51 chr2 37032301 37033290 -213654564 - L1MEd LINE L1 -4741 1388 561 2197 84 3 14 chr2 37034373 37034669 -213653185 - AluSg SINE Alu -17 293 1 511 323 44 13 chr2 37034983 37035212 -213652642 + L2 LINE L2 2174 2409 -905 1353 237 22 37 chr2 37035269 37035679 -213652175 - L1MC2 LINE L1 -9 6335 5932 471 184 0 0 chr2 37035780 37035921 -213651933 + (TA)n Simple_repeat Simple_repeat 2 142 0 195 69 0 0 chr2 37035926 37035955 -213651899 + (TC)n Simple_repeat Simple_repeat 2 30 0 270 160 0 0 chr2 37035955 37036005 -213651849 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 526 322 23 0 chr2 37036013 37036187 -213651667 - MIR SINE MIR -71 191 14 394 203 13 0 chr2 37036451 37036530 -213651324 + MLT1B LTR MaLR 34 113 -277 265 88 0 0 chr2 37036528 37036562 -213651292 + MLT1C LTR MaLR 434 467 0 * 6659 93 32 37 chr2 37036669 37037874 -213649980 - SVA Other Other -683 1386 382 544 189 33 25 chr2 37037991 37038113 -213649741 + L2 LINE L2 3189 3311 -2 198 330 54 27 chr2 37038417 37038529 -213649325 - MIR SINE MIR -50 212 98 2094 105 10 3 chr2 37038669 37038965 -213648889 + AluY SINE Alu 1 298 -13 305 289 253 5 chr2 37039497 37039687 -213648167 - MIR SINE MIR -16 246 10 208 280 0 0 chr2 37040199 37040249 -213647605 - L2 LINE L2 -1 3271 3222 250 343 118 0 chr2 37041141 37041243 -213646611 + MER91A DNA MER1_type 1 114 -82 21 36 0 0 chr2 37041457 37041485 -213646369 + AT_rich Low_complexity Low_complexity 1 28 0 34 24 0 0 chr2 37041787 37041828 -213646026 + AT_rich Low_complexity Low_complexity 1 41 0 505 269 104 22 chr2 37041870 37042052 -213645802 + MIR3 SINE MIR 1 197 -11 5415 174 29 15 chr2 37042560 37044025 -213643829 - L1MA9 LINE L1 0 7731 6242 3264 230 61 33 chr2 37044008 37044113 -213643741 - L1MA9 LINE L1 -3122 4443 4342 * 2182 41 41 61 chr2 37044113 37044406 -213643448 - AluY SINE Alu -20 291 5 3264 230 61 33 chr2 37044406 37045905 -213641949 - L1MA9 LINE L1 -3223 4342 2781 532 286 28 113 chr2 37046654 37046937 -213640917 + L2 LINE L2 3014 3272 0 248 241 27 80 chr2 37049187 37049299 -213638555 + L3 LINE CR1 391 496 -1081 638 319 91 25 chr2 37049455 37049816 -213638038 - LTR16B LTR ERVL -4 446 37 261 0 0 0 chr2 37050168 37050197 -213637657 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1621 179 15 101 chr2 37050255 37050302 -213637552 + MLT1B LTR MaLR 6 55 -335 2150 120 0 0 chr2 37050302 37050612 -213637242 + AluSx SINE Alu 1 310 0 1621 179 15 101 chr2 37050612 37050971 -213636883 + MLT1B LTR MaLR 55 378 -12 239 241 103 0 chr2 37051026 37051084 -213636770 + LTR67 LTR ERVL 109 172 -385 14834 36 8 1 chr2 37051416 37053985 -213633869 + L1PA4 LINE L1 3579 6155 0 731 122 0 0 chr2 37054121 37054228 -213633626 - AluSc SINE Alu -18 291 185 622 120 0 0 chr2 37054227 37054319 -213633535 - AluS SINE Alu -220 92 1 * 381 93 0 0 chr2 37054495 37054549 -213633305 + (CA)n Simple_repeat Simple_repeat 2 55 0 1887 131 4 0 chr2 37054549 37054823 -213633031 - AluSx SINE Alu -35 277 3 536 330 80 24 chr2 37055060 37055396 -213632458 + L3 LINE CR1 510 864 -713 201 243 0 0 chr2 37055506 37055543 -213632311 + (TG)n Simple_repeat Simple_repeat 2 38 0 573 358 156 7 chr2 37055793 37056223 -213631631 + L3 LINE CR1 1009 1502 -75 852 257 132 19 chr2 37056332 37056643 -213631211 - MLT1C LTR MaLR 0 467 122 629 200 110 50 chr2 37056623 37056823 -213631031 - MLT1C LTR MaLR -250 217 6 * 889 229 62 45 chr2 37057744 37057849 -213630005 + MLT1B LTR MaLR 6 108 -282 1883 181 0 0 chr2 37057849 37058147 -213629707 + AluSx SINE Alu 3 300 -12 889 229 62 45 chr2 37058147 37058488 -213629366 + MLT1B LTR MaLR 108 388 -2 551 248 129 50 chr2 37058490 37058897 -213628957 + MLT1D LTR MaLR 37 467 0 232 343 76 29 chr2 37059714 37059819 -213628035 - L2 LINE L2 -13 3259 3150 213 39 0 0 chr2 37060019 37060045 -213627809 + (TG)n Simple_repeat Simple_repeat 1 26 0 207 69 0 0 chr2 37060045 37060074 -213627780 + (GA)n Simple_repeat Simple_repeat 2 30 0 7305 223 35 30 chr2 37060398 37062134 -213625720 + L1MC1 LINE L1 3145 4897 -1249 1990 98 0 4 chr2 37062134 37062390 -213625464 + AluSx SINE Alu 44 298 -14 7305 223 35 30 chr2 37062390 37062826 -213625028 + L1MC1 LINE L1 4897 5329 -817 262 90 57 0 chr2 37062845 37062895 -213624959 + Alu SINE Alu 254 291 -11 5182 165 17 2 chr2 37062903 37063822 -213624032 + L1MC1 LINE L1 5325 6257 -76 2279 142 28 16 chr2 37063829 37064082 -213623772 + L1MB2 LINE L1 5742 6003 -168 1991 158 12 54 chr2 37064082 37064487 -213623367 - MLT1B LTR MaLR 0 390 3 2279 142 28 16 chr2 37064487 37064656 -213623198 + L1MB2 LINE L1 6003 6169 -2 427 284 10 36 chr2 37064699 37064893 -213622961 + L1MC/D LINE L1 1387 1575 -4965 1034 169 0 0 chr2 37064925 37065108 -213622746 + L1MA4A LINE L1 6059 6241 -62 257 218 13 0 chr2 37065150 37065228 -213622626 + L1MA4A LINE L1 6225 6303 0 3660 241 50 35 chr2 37065239 37065749 -213622105 + L1MC/D LINE L1 4149 4650 -1890 306 0 0 0 chr2 37065749 37065783 -213622071 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 3660 241 50 35 chr2 37065783 37066506 -213621348 + L1MC/D LINE L1 4650 5401 -1139 1338 150 24 12 chr2 37066513 37066766 -213621088 + L1MC/D LINE L1 5699 5954 -799 222 37 0 0 chr2 37066927 37066954 -213620900 + (CATA)n Simple_repeat Simple_repeat 2 28 0 29 28 0 0 chr2 37066969 37067005 -213620849 + AT_rich Low_complexity Low_complexity 1 36 0 33 43 0 0 chr2 37067120 37067167 -213620687 + AT_rich Low_complexity Low_complexity 1 47 0 602 251 54 18 chr2 37068678 37068845 -213619009 + MER63A DNA MER1_type 38 210 0 200 244 0 0 chr2 37068865 37068906 -213618948 - L2 LINE L2 -7 3306 3266 2240 116 0 0 chr2 37069465 37069766 -213618088 - AluSx SINE Alu -11 301 1 534 182 146 73 chr2 37070720 37070912 -213616942 - L1MA10 LINE L1 -22 6312 6107 206 366 67 43 chr2 37072858 37073022 -213614832 - L2 LINE L2 -1 3271 3104 225 0 0 0 chr2 37073069 37073094 -213614760 + (CA)n Simple_repeat Simple_repeat 1 25 0 438 308 97 11 chr2 37074180 37074369 -213613485 - MIR SINE MIR -17 245 40 2065 135 39 39 chr2 37074405 37074769 -213613085 - THE1B LTR MaLR 0 364 1 342 0 0 0 chr2 37075860 37075898 -213611956 + (CA)n Simple_repeat Simple_repeat 2 39 0 238 386 79 16 chr2 37076824 37076951 -213610903 - L2 LINE L2 0 3272 3138 182 358 123 0 chr2 37077728 37077809 -213610045 - L2 LINE L2 -9 3263 3173 3175 125 17 23 chr2 37079111 37079575 -213608279 - L1PB4 LINE L1 -7 6149 5687 2232 113 7 0 chr2 37079575 37079884 -213607970 - AluSq SINE Alu -2 311 1 3175 125 17 23 chr2 37079884 37079947 -213607907 - L1PB4 LINE L1 -469 5687 5625 215 245 0 0 chr2 37081352 37081401 -213606453 - L3b LINE CR1 -241 1342 1294 216 371 28 28 chr2 37082198 37082341 -213605513 - MER5A DNA MER1_type 0 189 47 219 114 0 0 chr2 37082503 37082538 -213605316 + (CA)n Simple_repeat Simple_repeat 1 35 0 1338 216 24 27 chr2 37082542 37082871 -213604983 + L1MC4 LINE L1 5362 5689 -2119 1028 40 0 0 chr2 37083302 37083428 -213604426 - L1PA5 LINE L1 -6 6148 6023 24 0 0 0 chr2 37083562 37083586 -213604268 + AT_rich Low_complexity Low_complexity 1 24 0 3259 158 113 5 chr2 37083715 37084378 -213603476 - L1MA8 LINE L1 -2 6289 5555 364 244 47 0 chr2 37084498 37084584 -213603270 + L1MC4 LINE L1 6614 6703 -1339 345 300 0 0 chr2 37084522 37084612 -213603242 - L1MC4 LINE L1 -1339 6703 6614 * 317 299 34 54 chr2 37085344 37085491 -213602363 + MER5B DNA MER1_type 1 144 -34 243 263 0 0 chr2 37087741 37087798 -213600056 - L2 LINE L2 0 3313 3257 564 283 69 0 chr2 37087896 37088069 -213599785 + MER5A DNA MER1_type 2 186 -3 287 309 55 27 chr2 37089171 37089281 -213598573 + L2 LINE L2 3200 3312 -1 2054 127 7 10 chr2 37089336 37089636 -213598218 - AluSx SINE Alu -13 299 1 22 35 0 0 chr2 37090206 37090235 -213597619 + AT_rich Low_complexity Low_complexity 1 29 0 5684 114 19 2 chr2 37090345 37091651 -213596203 - L1PA16 LINE L1 -10 6156 4883 997 290 234 15 chr2 37091708 37092587 -213595267 + L2 LINE L2 2163 3309 -4 287 260 80 0 chr2 37092888 37092988 -213594866 - L1ME LINE L1 -468 5653 5546 662 136 8 0 chr2 37093234 37093352 -213594502 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 237 310 212 18 chr2 37094174 37094287 -213593567 + MIR3 SINE MIR 8 142 -66 264 314 114 83 chr2 37096140 37096404 -213591450 + L2 LINE L2 2999 3270 -2 471 35 0 0 chr2 37096810 37096852 -213591002 + (CA)n Simple_repeat Simple_repeat 1 99 0 471 35 0 0 chr2 37096852 37096909 -213590945 + (CA)n Simple_repeat Simple_repeat 2 58 0 729 217 0 7 chr2 37096931 37097069 -213590785 - FRAM SINE Alu -29 147 11 519 330 61 57 chr2 37098518 37098976 -213588878 + L2 LINE L2 2375 2834 -480 460 277 14 35 chr2 37099450 37099591 -213588263 + MER5A DNA MER1_type 49 186 -3 362 324 39 100 chr2 37099595 37099956 -213587898 - L2 LINE L2 -1157 2157 1819 226 341 15 0 chr2 37099956 37100088 -213587766 + L1ME LINE L1 5725 5858 -304 35 63 0 0 chr2 37100152 37100215 -213587639 + AT_rich Low_complexity Low_complexity 1 63 0 1370 128 32 4 chr2 37100264 37100515 -213587339 + L1MA7 LINE L1 6034 6291 0 2920 259 37 60 chr2 37100681 37101745 -213586109 + L1M4 LINE L1 4 1042 -5817 1532 212 45 67 chr2 37101753 37102466 -213585388 + L1M4 LINE L1 1150 1858 -4997 1623 214 55 2 chr2 37102466 37102923 -213584931 + L1M4 LINE L1 5551 6031 -926 1201 132 59 14 chr2 37102923 37103142 -213584712 - Tigger1 DNA MER2_type -2188 230 2 618 240 35 6 chr2 37103152 37103323 -213584531 - MIR SINE MIR -42 220 45 196 268 70 28 chr2 37106243 37106314 -213581540 + MIR SINE MIR 51 124 -138 21 0 0 0 chr2 37106903 37106924 -213580930 + AT_rich Low_complexity Low_complexity 1 21 0 1894 147 0 36 chr2 37107485 37107792 -213580062 + AluJb SINE Alu 1 296 -16 199 268 18 0 chr2 37108399 37108455 -213579399 + L2 LINE L2 3216 3272 0 194 250 0 0 chr2 37108566 37108606 -213579248 - L2 LINE L2 0 3272 3233 448 359 80 44 chr2 37108614 37108979 -213578875 - L2 LINE L2 -18 3295 2918 873 195 96 53 chr2 37109130 37109412 -213578442 - L1ME1 LINE L1 -41 6125 5832 2813 143 24 44 chr2 37109479 37110026 -213577828 + L1MA9 LINE L1 5482 6017 -295 28 0 0 0 chr2 37110026 37110054 -213577800 + AT_rich Low_complexity Low_complexity 1 28 0 3687 150 5 5 chr2 37110087 37110692 -213577162 + MER6A DNA MER2_type 1 605 0 582 268 153 78 chr2 37110692 37111077 -213576777 - L2 LINE L2 -1031 2283 1870 2127 145 18 33 chr2 37111087 37111481 -213576373 + L1MC1 LINE L1 5927 6314 -19 1651 216 42 85 chr2 37112077 37112620 -213575234 - MLT2B1 LTR ERVL 0 520 1 2058 166 13 3 chr2 37113346 37113964 -213573890 + L1MC/D LINE L1 4978 5602 -731 4340 144 24 53 chr2 37113973 37114985 -213572869 + MER11C LTR ERVK 1 1071 0 668 157 0 9 chr2 37114985 37115100 -213572754 + L1MC/D LINE L1 5610 5723 -610 2340 118 8 30 chr2 37115100 37115472 -213572382 - THE1B LTR MaLR 0 364 1 2880 65 43 2 chr2 37115472 37115869 -213571985 - THE1B-int LTR MaLR 0 1580 1168 457 115 0 0 chr2 37115870 37115931 -213571923 - AluSg/x SINE Alu -125 187 127 779 168 0 0 chr2 37115932 37116057 -213571797 - AluJo/FLAM SINE Alu -177 125 1 1226 198 80 0 chr2 37116748 37117011 -213570843 + L2 LINE L2 2258 2541 -773 1715 322 63 10 chr2 37117091 37118175 -213569679 - HERV16 LTR ERVL -1665 3989 2796 1175 214 18 59 chr2 37118176 37118613 -213569241 + MLT2B1 LTR ERVL 1 413 -1 3526 90 14 0 chr2 37118763 37119251 -213568603 - L1PA13 LINE L1 -19 6144 5650 533 309 34 19 chr2 37119406 37119726 -213568128 - HERV16 LTR ERVL -3762 1234 910 405 197 211 136 chr2 37120836 37121064 -213566790 + MIR SINE MIR 15 259 -3 220 410 63 9 chr2 37122030 37122252 -213565602 + MIR SINE MIR 5 238 -24 699 237 73 16 chr2 37124599 37124813 -213563041 - MIR SINE MIR -4 258 30 749 137 60 60 chr2 37126767 37126950 -213560904 + MER53 DNA DNA 1 183 -6 537 259 49 60 chr2 37127017 37127096 -213560758 + MER5A DNA MER1_type 1 79 -110 1760 185 34 0 chr2 37127096 37127393 -213560461 + AluJb SINE Alu 1 307 -5 1803 154 32 29 chr2 37127393 37127704 -213560150 + AluSx SINE Alu 1 312 0 537 259 49 60 chr2 37127704 37127808 -213560046 + MER5A DNA MER1_type 77 183 -6 513 201 345 0 chr2 37128758 37128952 -213558902 + MIR SINE MIR 2 262 0 373 309 11 53 chr2 37129087 37129275 -213558579 - MER5A DNA MER1_type -2 187 8 534 267 112 5 chr2 37129471 37129658 -213558196 - MIR SINE MIR 0 262 56 467 284 20 76 chr2 37129699 37129896 -213557958 - MER5A DNA MER1_type 0 189 4 500 229 0 134 chr2 37130747 37130948 -213556906 + MIR SINE MIR 87 260 -2 2131 135 140 8 chr2 37131015 37131393 -213556461 - MSTA LTR MaLR 0 428 1 666 189 144 0 chr2 37132386 37132539 -213555315 + MER63A DNA MER1_type 36 210 0 371 321 47 70 chr2 37132675 37132890 -213554964 + HAL1 LINE L1 1 210 -2297 193 313 35 97 chr2 37133014 37133158 -213554696 + L3 LINE CR1 1421 1555 -22 251 258 83 53 chr2 37133527 37133605 -213554249 - L2 LINE L2 -3 3310 3225 1655 163 39 20 chr2 37133605 37133911 -213553943 + AluJo SINE Alu 1 312 0 251 258 83 53 chr2 37133911 37133964 -213553890 - L2 LINE L2 -88 3225 3175 308 130 0 0 chr2 37134714 37134768 -213553086 + MER53 DNA DNA 29 82 -107 783 288 58 4 chr2 37134887 37134948 -213552906 + L2 LINE L2 3021 3077 -236 1933 123 13 40 chr2 37134948 37135249 -213552605 + AluSx SINE Alu 1 293 -19 783 288 58 4 chr2 37135249 37135465 -213552389 + L2 LINE L2 3077 3313 0 1961 136 58 17 chr2 37135915 37136275 -213551579 - THE1C LTR MaLR 0 375 1 226 222 0 0 chr2 37137003 37137048 -213550806 + GA-rich Low_complexity Low_complexity 1 45 0 1887 110 0 101 chr2 37137109 37137436 -213550418 + AluSx SINE Alu 1 294 -18 418 229 0 0 chr2 37137537 37137620 -213550234 + L2 LINE L2 3231 3313 0 2527 49 0 10 chr2 37138706 37139012 -213548842 + AluY SINE Alu 1 303 -8 346 274 35 44 chr2 37139013 37139126 -213548728 - L2 LINE L2 -19 3253 3142 21 36 0 0 chr2 37141469 37141497 -213546357 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 37141831 37141853 -213546001 + (CA)n Simple_repeat Simple_repeat 2 23 0 646 238 0 0 chr2 37142078 37142204 -213545650 + FLAM_C SINE Alu 1 126 -7 628 258 57 57 chr2 37142368 37142597 -213545257 - MER21B LTR ERV1 -362 501 273 420 291 28 50 chr2 37142667 37142808 -213545046 + L2 LINE L2 3127 3264 -8 22 0 0 0 chr2 37142811 37142833 -213545021 + AT_rich Low_complexity Low_complexity 1 22 0 236 367 33 0 chr2 37143103 37143193 -213544661 + MIR SINE MIR 58 150 -58 14904 170 29 10 chr2 37143209 37143892 -213543962 + L1P LINE L1 805 1474 -4672 2076 127 7 0 chr2 37143892 37144183 -213543671 + AluSg SINE Alu 1 293 -17 14904 170 29 10 chr2 37144183 37147267 -213540587 + L1P LINE L1 1474 4628 -1518 * 23348 96 7 15 chr2 37147266 37150842 -213537012 - L1P LINE L1 -2590 3556 11 793 120 73 7 chr2 37150849 37150999 -213536855 - MLT1A1 LTR MaLR -205 160 1 364 322 187 12 chr2 37152087 37152485 -213535369 - L2 LINE L2 -187 3085 2595 2220 110 30 0 chr2 37152489 37152788 -213535066 + AluSc SINE Alu 1 308 -1 666 328 96 37 chr2 37153146 37153603 -213534251 + L3 LINE CR1 1064 1547 -30 653 171 0 83 chr2 37154426 37154533 -213533321 + L1MA4 LINE L1 6124 6212 -88 2465 71 0 6 chr2 37154533 37154844 -213533010 + AluY SINE Alu 1 309 -2 653 171 0 83 chr2 37154844 37154917 -213532937 + L1MA4 LINE L1 6212 6289 -11 281 288 32 8 chr2 37155417 37155542 -213532312 + L1MB7 LINE L1 5520 5647 -665 431 196 26 0 chr2 37155748 37155901 -213531953 + (TA)n Simple_repeat Simple_repeat 1 157 0 23 33 0 0 chr2 37156035 37156065 -213531789 + AT_rich Low_complexity Low_complexity 1 30 0 7092 100 6 15 chr2 37158028 37159095 -213528759 + MER11C LTR ERVK 1 1057 -14 304 44 0 22 chr2 37159623 37159668 -213528186 + L1PA16 LINE L1 6109 6152 -14 23 0 0 0 chr2 37159901 37159924 -213527930 + AT_rich Low_complexity Low_complexity 1 23 0 351 0 0 0 chr2 37160835 37160874 -213526980 + (TG)n Simple_repeat Simple_repeat 2 40 0 7957 228 31 9 chr2 37161399 37163748 -213524106 + L1M4 LINE L1 2458 4859 -1287 901 179 21 16 chr2 37163761 37163951 -213523903 + L1MB7 LINE L1 5936 6126 -58 207 69 0 0 chr2 37163958 37163987 -213523867 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 207 333 111 12 chr2 37164008 37164179 -213523675 + L2 LINE L2 3122 3309 -4 211 254 16 16 chr2 37164642 37164705 -213523149 - L2 LINE L2 0 3313 3251 243 197 49 0 chr2 37165319 37165380 -213522474 + L1M4 LINE L1 4727 4790 -1356 698 210 36 30 chr2 37165816 37165983 -213521871 + MER5A DNA MER1_type 15 182 -7 483 320 81 72 chr2 37166371 37166998 -213520856 + L2 LINE L2 2638 3268 -4 3787 169 33 33 chr2 37167538 37167868 -213519986 - MER44D DNA MER2_type -1882 605 401 2249 104 16 0 chr2 37167868 37168175 -213519679 - AluSq SINE Alu -1 312 1 3787 169 33 33 chr2 37168175 37168577 -213519277 - MER44D DNA MER2_type -2085 402 1 219 244 0 0 chr2 37168657 37168702 -213519152 - MER91B DNA MER1_type -127 63 19 1505 269 27 48 chr2 37168800 37169440 -213518414 + MER20B DNA MER1_type 51 676 -107 282 160 10 20 chr2 37169474 37169574 -213518280 + (TA)n Simple_repeat Simple_repeat 1 99 0 344 202 77 10 chr2 37169602 37169706 -213518148 + MER20B DNA MER1_type 668 778 -5 521 244 9 0 chr2 37169909 37170024 -213517830 - Tigger7 DNA MER2_type -616 117 2 677 143 0 0 chr2 37170128 37170251 -213517603 - AluSg/x SINE Alu 0 307 185 526 348 119 26 chr2 37170269 37170723 -213517131 - L2 LINE L2 -1 3312 2817 366 123 0 0 chr2 37170808 37170865 -213516989 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 290 382 65 0 chr2 37171063 37171186 -213516668 - L2 LINE L2 -3 3269 3139 345 47 0 0 chr2 37171334 37171377 -213516477 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 189 74 0 0 chr2 37171377 37171404 -213516450 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 674 311 27 0 chr2 37171475 37171658 -213516196 + MIR SINE MIR 10 197 -65 350 310 26 39 chr2 37171663 37171905 -213515949 - MLT1H LTR MaLR 0 549 312 269 68 23 0 chr2 37172142 37172186 -213515668 + (TA)n Simple_repeat Simple_repeat 1 45 0 208 237 34 51 chr2 37172195 37172254 -213515600 + MIR SINE MIR 205 262 0 662 330 53 4 chr2 37172513 37172740 -213515114 + MIR SINE MIR 25 262 0 709 186 27 66 chr2 37172779 37172962 -213514892 - MER5B DNA MER1_type 0 178 3 513 276 58 13 chr2 37172969 37173125 -213514729 - MIR3 SINE MIR -26 182 20 306 153 59 0 chr2 37173474 37173559 -213514295 + CT-rich Low_complexity Low_complexity 4 93 0 215 301 71 26 chr2 37174530 37174643 -213513211 - L3 LINE CR1 -875 702 585 309 308 76 17 chr2 37175614 37175851 -213512003 - L1ME4a LINE L1 -198 5923 5673 1371 175 32 20 chr2 37175858 37176109 -213511745 - AluJo SINE Alu -58 254 1 551 292 40 25 chr2 37176186 37176475 -213511379 - L1ME4a LINE L1 -526 5595 5346 334 209 39 78 chr2 37176628 37176781 -213511073 + MARNA DNA Mariner 415 561 -25 867 303 4 0 chr2 37176788 37177022 -213510832 + MIR SINE MIR 18 252 -10 2145 129 3 0 chr2 37177086 37177435 -213510419 - AluSq SINE Alu 0 313 1 2486 40 7 0 chr2 37177443 37177740 -213510114 - AluY SINE Alu -12 299 1 486 40 0 53 chr2 37177962 37178037 -213509817 - L1PA16 LINE L1 -1 6165 6095 209 359 68 44 chr2 37178419 37178625 -213509229 + MIR SINE MIR 47 257 -5 1379 149 0 5 chr2 37179052 37179260 -213508594 + AluJb SINE Alu 1 207 -105 819 117 17 28 chr2 37179267 37179446 -213508408 + GA-rich Low_complexity Low_complexity 4 180 0 272 155 0 17 chr2 37179441 37179499 -213508355 + G-rich Low_complexity Low_complexity 5 61 0 * 292 262 28 56 chr2 37179836 37179943 -213507911 + MIR3 SINE MIR 98 201 -7 347 294 31 37 chr2 37180375 37180538 -213507316 - MER104 DNA Tc2 -18 162 1 235 250 0 0 chr2 37180759 37180811 -213507043 - MIR SINE MIR -9 253 202 196 26 26 53 chr2 37180811 37180849 -213507005 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 2239 115 0 13 chr2 37182540 37182845 -213505009 - AluSx SINE Alu -11 301 1 848 259 86 43 chr2 37182884 37183281 -213504573 - MLT1J2 LTR MaLR -18 432 19 425 301 71 29 chr2 37183389 37183628 -213504226 - MARNA DNA Mariner -55 531 283 21 36 0 0 chr2 37184271 37184299 -213503555 + AT_rich Low_complexity Low_complexity 1 28 0 352 270 62 66 chr2 37184415 37184656 -213503198 + L1ME4a LINE L1 5562 5801 -320 301 228 31 99 chr2 37184765 37184927 -213502927 + L1ME4a LINE L1 5949 6099 -22 432 266 145 28 chr2 37184961 37185026 -213502828 + MIR SINE MIR 21 77 -185 1296 204 36 22 chr2 37185026 37185300 -213502554 - AluJb SINE Alu -30 282 5 432 266 145 28 chr2 37185300 37185448 -213502406 + MIR SINE MIR 77 259 -3 437 300 15 93 chr2 37185625 37185895 -213501959 + MIR SINE MIR 14 262 0 288 297 89 0 chr2 37186176 37186277 -213501577 - MIR SINE MIR -71 191 82 270 0 0 0 chr2 37186278 37186308 -213501546 + (GA)n Simple_repeat Simple_repeat 2 31 0 216 0 0 0 chr2 37186307 37186331 -213501523 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 203 79 26 0 chr2 37187125 37187163 -213500691 + (CCCCCA)n Simple_repeat Simple_repeat 3 41 0 2316 99 0 40 chr2 37188446 37188770 -213499084 - AluSx SINE Alu -1 311 1 290 256 22 44 chr2 37188830 37188920 -213498934 - L3 LINE CR1 -6 1571 1484 362 291 141 85 chr2 37190208 37190440 -213497414 - L1M2 LINE L1 -5701 1148 931 192 40 0 0 chr2 37190440 37190465 -213497389 + (AGGGGG)n Simple_repeat Simple_repeat 6 30 0 362 291 141 85 chr2 37190465 37190798 -213497056 - L1M2 LINE L1 -5918 931 551 324 275 99 112 chr2 37190872 37191356 -213496498 - L1M2 LINE L1 -5844 1005 528 22 0 0 0 chr2 37191781 37191803 -213496051 + GC_rich Low_complexity Low_complexity 1 22 0 2199 124 0 7 chr2 37197752 37198058 -213489796 + AluSx SINE Alu 1 304 -8 342 265 86 28 chr2 37198066 37198210 -213489644 + MIR SINE MIR 91 247 -15 506 242 181 0 chr2 37198946 37199095 -213488759 - MER5A DNA MER1_type -2 187 12 410 329 40 28 chr2 37199446 37199645 -213488209 + MIR SINE MIR 4 202 -60 203 263 0 18 chr2 37199647 37199704 -213488150 + (TATG)n Simple_repeat Simple_repeat 1 56 0 29 0 0 0 chr2 37199725 37199754 -213488100 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 37200093 37200115 -213487739 + AT_rich Low_complexity Low_complexity 1 22 0 2206 97 21 0 chr2 37200573 37200862 -213486992 - AluSc SINE Alu -14 295 1 230 271 23 47 chr2 37202239 37202368 -213485486 + MIR SINE MIR 41 166 -96 182 313 50 12 chr2 37202354 37202434 -213485420 + MIR3 SINE MIR 123 205 -3 * 22 0 0 0 chr2 37205036 37205058 -213482796 + AT_rich Low_complexity Low_complexity 1 22 0 225 255 0 0 chr2 37206231 37206278 -213481576 + L2 LINE L2 3263 3309 -4 652 256 83 33 chr2 37212269 37212511 -213475343 + MIR SINE MIR 9 262 0 183 305 49 24 chr2 37212504 37212586 -213475268 + L2 LINE L2 3186 3269 -3 * 234 281 0 0 chr2 37213026 37213083 -213474771 + L2 LINE L2 3216 3272 0 491 70 56 0 chr2 37213643 37213714 -213474140 - AluJ/FRAM SINE Alu -10 302 228 237 132 0 0 chr2 37214563 37214601 -213473253 + (T)n Simple_repeat Simple_repeat 1 38 0 181 308 55 33 chr2 37215617 37215708 -213472146 - MIR3 SINE MIR -8 200 108 1131 136 0 0 chr2 37216476 37216631 -213471223 + AluSg/x SINE Alu 136 290 -22 220 338 52 58 chr2 37218567 37218721 -213469133 - L2 LINE L2 -266 3047 2895 940 298 71 15 chr2 37218721 37219114 -213468740 - L2 LINE L2 -5 3308 2894 313 239 0 0 chr2 37220677 37220744 -213467110 + MIR SINE MIR 195 261 -1 22 56 0 0 chr2 37221116 37221152 -213466702 + AT_rich Low_complexity Low_complexity 1 36 0 220 341 96 15 chr2 37221431 37221566 -213466288 - L2 LINE L2 0 3313 3168 184 313 209 24 chr2 37221633 37221844 -213466010 - L2 LINE L2 -197 3075 2826 238 290 140 14 chr2 37222644 37222923 -213464931 - L1M4 LINE L1 -2922 3224 2911 21 0 0 0 chr2 37223211 37223232 -213464622 + AT_rich Low_complexity Low_complexity 1 21 0 340 353 72 13 chr2 37223307 37223460 -213464394 - MIR3 SINE MIR -6 202 41 2009 146 7 0 chr2 37225645 37225946 -213461908 - AluSx SINE Alu -9 303 1 2469 65 7 3 chr2 37225955 37226264 -213461590 - AluY SINE Alu -1 310 1 1413 206 26 88 chr2 37226492 37226944 -213460910 + Charlie1a DNA MER1_type 1 424 -1031 254 300 40 20 chr2 37226944 37227044 -213460810 - L2 LINE L2 -971 2343 2242 257 209 15 0 chr2 37228303 37228370 -213459484 + (TA)n Simple_repeat Simple_repeat 2 69 0 445 323 118 33 chr2 37228453 37228946 -213458908 - L2 LINE L2 -181 3091 2549 223 270 20 20 chr2 37229388 37229488 -213458366 + (TATATG)n Simple_repeat Simple_repeat 6 105 0 1869 158 45 0 chr2 37229847 37230138 -213457716 - AluSx SINE Alu -8 304 1 1455 174 70 11 chr2 37230776 37231046 -213456808 - AluJo SINE Alu -26 286 1 182 200 0 0 chr2 37232315 37232350 -213455504 + MIR SINE MIR 48 82 -126 220 222 0 95 chr2 37232659 37232722 -213455132 - L3b LINE CR1 -3 1580 1524 210 375 85 48 chr2 37233886 37234403 -213453451 - L2 LINE L2 -384 2930 2395 401 318 70 5 chr2 37234403 37234604 -213453250 - L2 LINE L2 -1528 1786 1573 1753 295 173 22 chr2 37234617 37235714 -213452140 - L2 LINE L2 -1905 1409 147 273 319 0 0 chr2 37236660 37236729 -213451125 - L2 LINE L2 -5 3308 3240 984 319 141 18 chr2 37236976 37237738 -213450116 - L2 LINE L2 -129 3184 2329 332 251 137 34 chr2 37238591 37238766 -213449088 - L2 LINE L2 -896 2418 2226 222 222 0 0 chr2 37239376 37239421 -213448433 - L2 LINE L2 0 3272 3228 283 274 77 17 chr2 37240330 37240447 -213447407 - MER5A DNA MER1_type -57 132 9 219 329 0 0 chr2 37242053 37242126 -213445728 + (TA)n Simple_repeat Simple_repeat 1 73 0 22 0 0 0 chr2 37244145 37244167 -213443687 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 37246499 37246522 -213441332 + (TG)n Simple_repeat Simple_repeat 2 24 0 951 289 109 44 chr2 37249247 37250080 -213437774 - L2 LINE L2 0 3272 2370 2089 130 0 0 chr2 37250762 37251070 -213436784 + AluSx SINE Alu 1 308 0 240 289 91 64 chr2 37252891 37253078 -213434776 - L2 LINE L2 -1511 1803 1612 1547 174 67 0 chr2 37253141 37253423 -213434431 - AluJb SINE Alu -11 301 1 247 264 59 18 chr2 37253629 37253752 -213434102 + MIR SINE MIR 49 176 -32 450 281 251 15 chr2 37255082 37255281 -213432573 - MIR SINE MIR -2 260 15 186 296 19 0 chr2 37255493 37255547 -213432307 - L2 LINE L2 -251 3021 2967 1065 294 30 11 chr2 37256662 37257029 -213430825 - MARNA DNA Mariner -165 421 48 446 229 131 44 chr2 37258604 37258787 -213429067 - MIR SINE MIR 0 262 64 231 361 48 0 chr2 37258894 37258977 -213428877 - L2 LINE L2 -30 3242 3156 261 326 41 10 chr2 37259160 37259258 -213428596 + L2 LINE L2 3161 3261 -11 490 96 0 48 chr2 37259625 37259708 -213428146 + L1MA4 LINE L1 6190 6268 -32 296 307 80 13 chr2 37259782 37259932 -213427922 - MIR3 SINE MIR -24 184 25 2423 103 0 0 chr2 37261757 37262067 -213425787 + AluSg SINE Alu 1 310 0 193 200 0 108 chr2 37262153 37262218 -213425636 + L3 LINE CR1 1345 1402 -175 280 292 22 11 chr2 37263040 37263129 -213424725 + MIR SINE MIR 41 130 -78 410 237 143 40 chr2 37263652 37263913 -213423941 + MLT1J LTR MaLR 1 249 -160 447 256 160 0 chr2 37264519 37264644 -213423210 + MER5A DNA MER1_type 2 146 -43 21 0 0 0 chr2 37267206 37267227 -213420627 + AT_rich Low_complexity Low_complexity 1 21 0 654 218 11 73 chr2 37267588 37267767 -213420087 - MER5B DNA MER1_type -9 169 2 933 202 17 6 chr2 37267781 37267959 -213419895 - MER5A DNA MER1_type -6 183 4 527 164 14 57 chr2 37268009 37268124 -213419730 - MER5A DNA MER1_type -77 112 4 931 232 0 17 chr2 37268388 37268569 -213419285 - MER5B DNA MER1_type 0 178 1 399 254 107 13 chr2 37269273 37269471 -213418383 + MIR SINE MIR 28 245 -17 259 377 39 0 chr2 37269659 37269789 -213418065 + L2 LINE L2 2921 3055 -258 183 42 0 0 chr2 37270167 37270191 -213417663 + (TG)n Simple_repeat Simple_repeat 1 24 0 646 89 0 0 chr2 37270434 37270513 -213417341 + MADE1 DNA Mariner 1 79 -1 2371 72 0 0 chr2 37271930 37272222 -213415632 + AluY SINE Alu 1 292 -19 231 309 29 29 chr2 37272224 37272360 -213415494 + L1M4 LINE L1 3643 3778 -2368 2304 110 0 0 chr2 37272688 37272989 -213414865 + AluSc SINE Alu 1 301 -8 553 248 87 7 chr2 37273644 37273793 -213414061 + MIR SINE MIR 20 180 -82 851 254 118 48 chr2 37274285 37274794 -213413060 + L2 LINE L2 2763 3298 -15 451 296 99 14 chr2 37274962 37275104 -213412750 + MIR3 SINE MIR 30 183 -25 204 125 0 0 chr2 37277064 37277096 -213410758 + (T)n Simple_repeat Simple_repeat 1 32 0 608 295 81 19 chr2 37279085 37279343 -213408511 + L3 LINE CR1 1302 1575 -2 189 273 18 0 chr2 37281179 37281234 -213406620 - L2 LINE L2 0 3313 3258 21 0 0 0 chr2 37282068 37282089 -213405765 + AT_rich Low_complexity Low_complexity 1 21 0 329 248 133 40 chr2 37282218 37282400 -213405454 - MLT1H LTR MaLR 0 549 404 575 256 39 6 chr2 37282425 37282605 -213405249 - MLT1F1 LTR MaLR -378 189 4 187 366 70 0 chr2 37288270 37288341 -213399513 + L2 LINE L2 3148 3223 -49 316 357 95 58 chr2 37288438 37288732 -213399122 - L2 LINE L2 -12 3260 2956 189 371 14 0 chr2 37289071 37289141 -213398713 + L2 LINE L2 2904 2974 -298 198 71 0 0 chr2 37289205 37289233 -213398621 + (CA)n Simple_repeat Simple_repeat 1 28 0 183 383 0 17 chr2 37289362 37289422 -213398432 - L2 LINE L2 -2127 1187 1129 362 288 93 0 chr2 37289447 37289565 -213398289 + Charlie8 DNA MER1_type 26 154 -2263 211 325 136 35 chr2 37289726 37290095 -213397759 - L2 LINE L2 -2199 1115 710 728 291 42 17 chr2 37290144 37290385 -213397469 - MIR SINE MIR -3 259 13 214 294 93 48 chr2 37290438 37290707 -213397147 - L2 LINE L2 -2803 511 231 186 71 0 0 chr2 37291962 37291990 -213395864 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 863 95 35 0 chr2 37291993 37292109 -213395745 - L1PB1 LINE L1 -1 6150 6031 275 336 71 0 chr2 37293622 37293735 -213394119 - MIR3 SINE MIR -5 203 83 251 319 37 15 chr2 37294004 37294139 -213393715 - MER5A DNA MER1_type -1 188 51 * 317 280 25 45 chr2 37294021 37294178 -213393676 + MER5A DNA MER1_type 36 189 0 22 0 0 0 chr2 37294204 37294226 -213393628 + AT_rich Low_complexity Low_complexity 1 22 0 1831 132 22 4 chr2 37295122 37295395 -213392459 + L1MB7 LINE L1 5897 6174 -10 281 156 65 26 chr2 37296627 37296704 -213391150 + MER116 DNA Mariner 1 80 0 593 221 0 0 chr2 37297078 37297191 -213390663 + L1PB4 LINE L1 6031 6143 -13 507 285 19 32 chr2 37300500 37300658 -213387196 + MIR SINE MIR 2 157 -105 2382 77 0 3 chr2 37300723 37301022 -213386832 - AluY SINE Alu -13 298 1 316 344 72 0 chr2 37301420 37301545 -213386309 + L2 LINE L2 3133 3266 -6 251 293 0 0 chr2 37302200 37302275 -213385579 + (TA)n Simple_repeat Simple_repeat 2 76 0 8929 103 59 19 chr2 37305109 37306458 -213381396 + Tigger1 DNA MER2_type 893 2307 -111 1160 86 215 0 chr2 37306458 37306563 -213381291 + MER30 DNA MER1_type 1 82 -148 306 0 0 0 chr2 37306563 37306597 -213381257 + (CA)n Simple_repeat Simple_repeat 2 35 0 1160 86 215 0 chr2 37306597 37306677 -213381177 + MER30 DNA MER1_type 82 226 -4 8929 103 59 19 chr2 37306677 37306793 -213381061 + Tigger1 DNA MER2_type 2307 2417 -1 234 302 16 58 chr2 37307856 37307981 -213379873 + MIR SINE MIR 72 189 -67 5891 205 59 14 chr2 37308188 37309410 -213378444 - L1MB7 LINE L1 0 6184 5019 2038 126 34 7 chr2 37309410 37309703 -213378151 + AluSx SINE Alu 1 301 -11 5891 205 59 14 chr2 37309703 37310882 -213376972 - L1MB7 LINE L1 -1165 5019 3682 368 287 163 8 chr2 37311072 37311201 -213376653 + MIR SINE MIR 59 207 -55 183 156 0 0 chr2 37311540 37311572 -213376282 + T-rich Low_complexity Low_complexity 4 35 0 294 246 0 29 chr2 37312635 37312704 -213375150 - MIR SINE MIR -56 152 86 296 285 52 62 chr2 37316440 37316633 -213371221 - MIR SINE MIR -49 213 23 473 270 72 68 chr2 37318216 37318463 -213369391 - MIR SINE MIR -8 254 3 1032 288 50 30 chr2 37322139 37322643 -213365211 - MARNA DNA Mariner -30 556 43 384 297 30 6 chr2 37322500 37322665 -213365189 + MARNA DNA Mariner 397 565 -21 * 229 281 180 16 chr2 37325126 37325275 -213362579 - MIR SINE MIR -68 194 20 222 270 48 16 chr2 37326447 37326510 -213361344 - L2 LINE L2 -19 3294 3230 21 0 0 0 chr2 37326837 37326858 -213360996 + AT_rich Low_complexity Low_complexity 1 21 0 745 157 0 0 chr2 37327985 37328106 -213359748 + FLAM_C SINE Alu 23 143 0 22 35 0 0 chr2 37328685 37328714 -213359140 + AT_rich Low_complexity Low_complexity 1 29 0 201 108 0 0 chr2 37330296 37330333 -213357521 + (T)n Simple_repeat Simple_repeat 1 37 0 384 311 7 46 chr2 37332746 37332937 -213354917 + MIR3 SINE MIR 5 181 -61 670 298 83 5 chr2 37333100 37333318 -213354536 + MIR SINE MIR 4 238 -24 1359 305 156 48 chr2 37334493 37334881 -213352973 - L3 LINE CR1 -127 1450 1105 1549 197 0 17 chr2 37334881 37335175 -213352679 + AluJb SINE Alu 1 289 -23 1359 305 156 48 chr2 37335175 37336011 -213351843 - L3 LINE CR1 -472 1105 94 1934 168 0 10 chr2 37336273 37336583 -213351271 + AluJb SINE Alu 1 307 -5 225 381 0 0 chr2 37337361 37337445 -213350409 - L2 LINE L2 -1 3271 3188 695 236 52 48 chr2 37338055 37338284 -213349570 + MIR SINE MIR 4 233 -29 1745 174 3 14 chr2 37338716 37339010 -213348844 - AluJb SINE Alu -21 291 1 296 330 0 9 chr2 37339662 37339768 -213348086 + MIR3 SINE MIR 98 202 -6 1768 150 6 6 chr2 37340087 37340401 -213347453 - MER6 DNA MER2_type 0 865 552 * 3306 169 3 10 chr2 37340398 37340997 -213346857 - MER6 DNA MER2_type -57 808 214 198 0 0 0 chr2 37340997 37341019 -213346835 + (TC)n Simple_repeat Simple_repeat 1 22 0 1119 171 51 17 chr2 37341026 37341260 -213346594 - MER6 DNA MER2_type -623 242 1 1636 160 4 14 chr2 37341677 37341989 -213345865 - AluJo SINE Alu 0 317 9 189 308 111 26 chr2 37342262 37342379 -213345475 - L2 LINE L2 0 3272 3146 1787 148 7 43 chr2 37344076 37344380 -213343474 + AluSx SINE Alu 5 297 -15 1864 133 9 56 chr2 37345755 37346077 -213341777 - AluJb SINE Alu -5 307 1 195 69 0 0 chr2 37346682 37346711 -213341143 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 189 107 0 0 chr2 37346713 37346741 -213341113 + (TGGG)n Simple_repeat Simple_repeat 2 29 0 199 333 29 29 chr2 37348620 37348725 -213339129 + MIR3 SINE MIR 82 186 -22 198 206 0 0 chr2 37349650 37349684 -213338170 + L3 LINE CR1 1534 1567 -10 280 243 92 76 chr2 37351664 37351810 -213336044 + MIR SINE MIR 88 250 -12 2389 103 0 0 chr2 37357356 37357667 -213330187 + AluSx SINE Alu 1 311 -1 1369 120 5 0 chr2 37357792 37357983 -213329871 - AluSg/x SINE Alu -13 299 108 629 194 14 58 chr2 37358889 37359028 -213328826 + MER94 DNA DNA 1 133 -1 259 50 100 0 chr2 37359272 37359312 -213328542 - L1PA13 LINE L1 -1 6162 6119 36 40 0 0 chr2 37361976 37362026 -213325828 + AT_rich Low_complexity Low_complexity 1 50 0 23 33 0 0 chr2 37362231 37362261 -213325593 + AT_rich Low_complexity Low_complexity 1 30 0 418 282 62 48 chr2 37362724 37362933 -213324921 + MIR SINE MIR 9 220 -42 208 353 15 0 chr2 37365758 37365826 -213322028 + L2 LINE L2 3203 3271 -42 802 289 46 43 chr2 37366825 37367175 -213320679 - MARNA DNA Mariner -224 362 12 649 260 75 35 chr2 37367521 37367748 -213320106 + MIR SINE MIR 27 262 0 1537 174 27 54 chr2 37368153 37368447 -213319407 + AluJo SINE Alu 11 296 -16 591 162 15 49 chr2 37368773 37369240 -213318614 + GA-rich Low_complexity Low_complexity 1 451 0 538 145 31 49 chr2 37369255 37369584 -213318270 + GA-rich Low_complexity Low_complexity 1 323 0 634 171 28 17 chr2 37369916 37370092 -213317762 + GA-rich Low_complexity Low_complexity 2 179 0 1193 124 60 35 chr2 37370662 37370863 -213316991 - MER2 DNA MER2_type -139 206 1 2276 265 133 50 chr2 37373773 37375140 -213312714 - L2 LINE L2 -2 3311 1810 202 284 83 55 chr2 37375927 37376036 -213311818 + MIR SINE MIR 25 136 -72 268 251 123 16 chr2 37376230 37376352 -213311502 - MIR SINE MIR -60 148 40 368 270 110 0 chr2 37377041 37377141 -213310713 + L2 LINE L2 3159 3269 -3 304 270 120 30 chr2 37377695 37377795 -213310059 + MER5A DNA MER1_type 81 189 0 428 226 57 38 chr2 37377983 37378089 -213309765 + MIR SINE MIR 28 135 -127 296 217 83 0 chr2 37380201 37380261 -213307593 - L2 LINE L2 0 3313 3249 243 0 0 0 chr2 37381600 37381627 -213306227 + (T)n Simple_repeat Simple_repeat 1 27 0 189 402 36 9 chr2 37382724 37382836 -213305018 - L3 LINE CR1 -5 1572 1458 398 280 271 15 chr2 37382964 37383303 -213304551 - L3 LINE CR1 -159 1418 993 218 136 23 0 chr2 37384664 37384708 -213303146 + (TA)n Simple_repeat Simple_repeat 1 45 0 306 87 0 0 chr2 37384858 37384904 -213302950 + (TG)n Simple_repeat Simple_repeat 1 46 0 29 0 0 0 chr2 37385374 37385403 -213302451 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 37385726 37385751 -213302103 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 37386512 37386537 -213301317 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr2 37390616 37390651 -213297203 + AT_rich Low_complexity Low_complexity 1 35 0 866 254 9 14 chr2 37391386 37391599 -213296255 + MIR SINE MIR 30 241 -21 26 30 0 0 chr2 37391626 37391659 -213296195 + AT_rich Low_complexity Low_complexity 1 33 0 217 223 268 62 chr2 37392036 37392148 -213295706 + MIR3 SINE MIR 33 167 -41 25 31 0 0 chr2 37392190 37392222 -213295632 + AT_rich Low_complexity Low_complexity 1 32 0 536 223 0 16 chr2 37392692 37392813 -213295041 + L2 LINE L2 3195 3313 0 1266 183 144 49 chr2 37396742 37397206 -213290648 + Charlie1b DNA MER1_type 1 521 -2 28 29 0 0 chr2 37397640 37397675 -213290179 + AT_rich Low_complexity Low_complexity 1 35 0 186 43 0 0 chr2 37398351 37398374 -213289480 + (A)n Simple_repeat Simple_repeat 1 23 0 274 196 18 0 chr2 37398941 37398997 -213288857 + MIR SINE MIR 202 258 -4 314 262 16 57 chr2 37399259 37399381 -213288473 - L2 LINE L2 -38 3275 3159 275 400 65 29 chr2 37399982 37400395 -213287459 + L2 LINE L2 2532 2959 -355 803 224 18 70 chr2 37400582 37400810 -213287044 - MER20 DNA MER1_type -3 216 1 1927 57 0 0 chr2 37400960 37401190 -213286664 + AluY SINE Alu 66 295 -16 491 306 67 6 chr2 37401542 37401722 -213286132 + MIR3 SINE MIR 14 204 -4 201 133 0 0 chr2 37401764 37401794 -213286060 + (CA)n Simple_repeat Simple_repeat 2 31 0 214 301 84 0 chr2 37401914 37401997 -213285857 + L2 LINE L2 3168 3257 -15 2438 80 0 0 chr2 37402316 37402616 -213285238 + AluSx SINE Alu 1 300 -12 255 338 0 0 chr2 37402986 37403060 -213284794 + G-rich Low_complexity Low_complexity 3 76 0 22 35 0 0 chr2 37403178 37403207 -213284647 + AT_rich Low_complexity Low_complexity 1 29 0 498 259 13 44 chr2 37403923 37404081 -213283773 + MIR SINE MIR 110 262 0 26 0 0 0 chr2 37404877 37404903 -213282951 + AT_rich Low_complexity Low_complexity 1 26 0 23 92 0 0 chr2 37405204 37405269 -213282585 + AT_rich Low_complexity Low_complexity 1 65 0 1985 161 26 23 chr2 37405382 37405729 -213282125 - MER7A DNA MER2_type 0 346 1 2017 111 21 0 chr2 37406215 37406503 -213281351 + AluSx SINE Alu 1 294 -18 2218 100 0 28 chr2 37406560 37406881 -213280973 + AluSx SINE Alu 1 312 0 1101 229 9 22 chr2 37407315 37407542 -213280312 - MER58A DNA MER1_type 0 224 1 187 383 149 7 chr2 37408387 37408528 -213279326 - L2 LINE L2 -8 3264 3104 290 220 0 0 chr2 37408903 37408962 -213278892 - L2 LINE L2 -974 2340 2282 509 246 16 91 chr2 37409847 37410034 -213277820 + L2 LINE L2 3081 3246 -67 1525 181 49 17 chr2 37410034 37410321 -213277533 - AluJo SINE Alu -12 300 5 509 246 16 91 chr2 37410321 37410385 -213277469 + L2 LINE L2 3246 3313 0 2444 76 0 3 chr2 37411106 37411407 -213276447 - AluSx SINE Alu -12 300 1 2359 75 14 0 chr2 37412098 37412390 -213275464 - AluSp SINE Alu -17 296 1 2294 143 87 3 chr2 37414203 37414594 -213273260 + MSTA LTR MaLR 1 424 -4 1994 137 63 6 chr2 37414685 37415020 -213272834 + MLT1B LTR MaLR 37 390 0 1169 118 39 49 chr2 37415539 37415707 -213272147 + MLT1B LTR MaLR 3 170 -220 2025 119 20 3 chr2 37415707 37416002 -213271852 + AluSq SINE Alu 1 300 -13 1169 118 39 49 chr2 37416002 37416037 -213271817 + MLT1B LTR MaLR 170 204 -186 23 0 0 0 chr2 37416784 37416807 -213271047 + AT_rich Low_complexity Low_complexity 1 23 0 1154 279 63 18 chr2 37418866 37419264 -213268590 + LTR33 LTR ERVL 37 452 -69 1916 239 137 56 chr2 37419878 37420901 -213266953 + HAL1 LINE L1 1394 2499 -8 21 57 0 0 chr2 37421151 37421186 -213266668 + AT_rich Low_complexity Low_complexity 1 35 0 1992 129 28 0 chr2 37421193 37421480 -213266374 + AluJb SINE Alu 5 299 -13 1612 155 7 25 chr2 37421507 37421784 -213266070 + AluJo SINE Alu 13 284 -28 2437 80 3 0 chr2 37422865 37423164 -213264690 - AluSx SINE Alu -12 300 1 1130 164 51 0 chr2 37423321 37423516 -213264338 + MER2 DNA MER2_type 1 205 -140 22 56 0 0 chr2 37423837 37423873 -213263981 + AT_rich Low_complexity Low_complexity 1 36 0 210 262 195 27 chr2 37423922 37424071 -213263783 - L2 LINE L2 0 3272 3099 568 335 11 6 chr2 37424172 37424348 -213263506 + L3 LINE CR1 1400 1576 -1 1898 107 85 0 chr2 37425233 37425504 -213262350 + AluSx SINE Alu 2 295 -17 770 219 6 6 chr2 37426113 37426277 -213261577 - MIR SINE MIR -27 235 72 224 365 83 22 chr2 37426556 37426737 -213261117 + MIR3 SINE MIR 3 194 -14 1030 51 0 0 chr2 37427111 37427228 -213260626 - L1PA10 LINE L1 -8 6160 6044 1706 148 6 35 chr2 37427364 37427681 -213260173 + AluJo SINE Alu 5 312 0 1472 78 10 0 chr2 37427929 37428122 -213259732 - THE1A LTR MaLR 0 355 161 7914 91 5 4 chr2 37428122 37429174 -213258680 - THE1A-int LTR MaLR -527 1053 1 3080 59 3 0 chr2 37429174 37429528 -213258326 - THE1A LTR MaLR 0 355 1 2958 126 52 2 chr2 37430017 37430461 -213257393 - MER1A DNA MER1_type -62 467 2 1464 177 3 41 chr2 37431306 37431600 -213256254 - AluJb SINE Alu -25 287 5 426 327 75 66 chr2 37432025 37432374 -213255480 + L2 LINE L2 2921 3272 0 305 285 115 79 chr2 37432634 37433134 -213254720 + L1M2 LINE L1 663 1162 -5687 203 274 97 0 chr2 37433479 37433541 -213254313 + MIR SINE MIR 191 258 -4 861 116 41 14 chr2 37433643 37433790 -213254064 + L1MB3 LINE L1 6033 6183 0 1029 116 0 0 chr2 37433798 37433936 -213253918 + AluSq/x SINE Alu 1 138 -175 1590 138 127 75 chr2 37433936 37434362 -213253492 + LTR7 LTR ERV1 1 448 -2 19391 102 37 11 chr2 37434364 37437276 -213250578 + HERVH LTR ERV1 1 2987 -4726 880 149 20 0 chr2 37437270 37437418 -213250436 + HERVH LTR ERV1 3140 3290 -4423 * 3451 102 6 6 chr2 37437408 37437910 -213249944 + HERVH LTR ERV1 3492 3993 -3720 4294 153 3 1 chr2 37437912 37438573 -213249281 + HERVH LTR ERV1 4488 5149 -2564 1409 129 18 5 chr2 37438574 37438791 -213249063 + HERVH LTR ERV1 5600 5819 -1894 * 2560 74 45 13 chr2 37438789 37439169 -213248685 + HERVH LTR ERV1 7322 7713 0 1695 144 110 65 chr2 37439169 37439598 -213248256 + LTR7 LTR ERV1 1 448 -2 1552 65 0 0 chr2 37439631 37439816 -213248038 - AluY SINE Alu -126 185 1 2316 181 20 13 chr2 37441842 37442235 -213245619 - MSTD LTR MaLR 0 396 1 997 166 18 12 chr2 37442583 37442746 -213245108 + FRAM SINE Alu 1 158 -18 2041 129 13 3 chr2 37443790 37444099 -213243755 + AluSx SINE Alu 1 312 0 1951 174 22 82 chr2 37444997 37445124 -213242730 + MLT1B LTR MaLR 1 134 -256 1884 115 6 88 chr2 37445124 37445464 -213242390 + AluSx SINE Alu 1 312 0 1951 174 22 82 chr2 37445464 37445751 -213242103 + MLT1B LTR MaLR 134 390 0 386 234 32 0 chr2 37449403 37449497 -213238357 + MER69 DNA AcHobo 1 97 -2429 645 218 34 0 chr2 37449501 37449648 -213238206 + MER69 DNA AcHobo 1941 2092 -434 2067 165 60 3 chr2 37449663 37450033 -213237821 - MER57A LTR ERV1 -3 400 10 549 209 45 8 chr2 37450564 37450698 -213237156 + MER69 DNA AcHobo 2118 2256 -270 789 141 0 16 chr2 37450704 37450825 -213237029 + AluJb SINE Alu 192 310 -2 2282 100 13 72 chr2 37450863 37451212 -213236642 - MER4E LTR ERV1 0 779 454 2184 109 7 13 chr2 37451212 37451515 -213236339 + AluSq SINE Alu 1 301 -12 2282 100 13 72 chr2 37451515 37451555 -213236299 - MER4E LTR ERV1 -325 454 413 3291 144 50 11 chr2 37451557 37452118 -213235736 - MER4D LTR ERV1 -320 583 1 827 202 121 9 chr2 37452118 37452340 -213235514 + MER69 DNA AcHobo 2279 2525 -1 2260 136 41 37 chr2 37452421 37452562 -213235292 - LTR23 LTR ERV1 0 437 298 2257 84 3 62 chr2 37452562 37452884 -213234970 - AluSp SINE Alu -10 303 1 2260 136 41 37 chr2 37452884 37453177 -213234677 - LTR23 LTR ERV1 -139 298 1 968 280 66 26 chr2 37453316 37453695 -213234159 + MLT1J2 LTR MaLR 45 438 -12 1813 119 85 58 chr2 37453895 37454223 -213233631 + MER1B DNA MER1_type 1 337 0 357 314 93 23 chr2 37454276 37454448 -213233406 + L3 LINE CR1 1377 1560 -17 2171 132 5 57 chr2 37454574 37454698 -213233156 + MSTC LTR MaLR 48 177 -251 2337 101 0 3 chr2 37454698 37455004 -213232850 + AluSx SINE Alu 2 306 -6 2171 132 5 57 chr2 37455004 37455281 -213232573 + MSTC LTR MaLR 177 428 0 206 234 0 21 chr2 37456347 37456394 -213231460 + GA-rich Low_complexity Low_complexity 1 46 0 621 226 48 12 chr2 37457395 37457563 -213230291 + MER58B DNA MER1_type 168 341 0 23 33 0 0 chr2 37457916 37457946 -213229908 + AT_rich Low_complexity Low_complexity 1 30 0 32 26 0 0 chr2 37458021 37458060 -213229794 + AT_rich Low_complexity Low_complexity 1 39 0 876 102 75 14 chr2 37458742 37458889 -213228965 + L1PA15 LINE L1 6004 6159 -6 323 256 125 22 chr2 37458905 37459100 -213228754 + L1M4 LINE L1 5209 5421 -756 1746 178 0 14 chr2 37459105 37459392 -213228462 + AluJo SINE Alu 11 293 -19 450 264 77 48 chr2 37459430 37459740 -213228114 - L1M4 LINE L1 -1095 5051 4733 2301 99 3 0 chr2 37459803 37460096 -213227758 - AluSg SINE Alu -16 294 1 1732 189 111 120 chr2 37460146 37460600 -213227254 - LTR8A LTR ERV1 -2 725 279 1190 21 0 0 chr2 37460600 37460740 -213227114 + L1PA2 LINE L1 6016 6155 0 1732 189 111 120 chr2 37460740 37461017 -213226837 - LTR8A LTR ERV1 -448 279 1 7263 170 83 45 chr2 37461019 37463147 -213224707 - HUERS-P1 LTR ERV1 -1 6262 3813 1267 191 0 9 chr2 37463165 37463385 -213224469 - AluJo SINE Alu -12 300 83 2801 135 2 22 chr2 37463385 37463882 -213223972 - HUERS-P1 LTR ERV1 -1614 3266 2780 3140 100 46 28 chr2 37463886 37464083 -213223771 + MER4B LTR ERV1 4 196 -583 2417 70 0 0 chr2 37464083 37464382 -213223472 + AluY SINE Alu 1 299 -12 3140 100 46 28 chr2 37464382 37464783 -213223071 + MER4B LTR ERV1 196 778 -1 2976 159 20 50 chr2 37464784 37465516 -213222338 - MER41-int LTR ERV1 -2654 3292 1843 267 140 20 0 chr2 37465566 37465616 -213222238 - MER34C LTR ERV1 -366 219 169 773 194 0 26 chr2 37465616 37465771 -213222083 - MER41-int LTR ERV1 -3225 2721 2571 2952 112 142 18 chr2 37465771 37466334 -213221520 + LTR10E LTR ERV1 1 633 0 4366 181 42 69 chr2 37466335 37467012 -213220842 - MER41-int LTR ERV1 -3439 2507 1813 2222 110 10 0 chr2 37467012 37467312 -213220542 - AluSx SINE Alu -9 303 1 4366 181 42 69 chr2 37467312 37468017 -213219837 - MER41-int LTR ERV1 -4133 1813 912 5387 116 22 14 chr2 37468017 37469507 -213218347 - L1PA16 LINE L1 -3 6163 4708 4366 181 42 69 chr2 37469507 37469649 -213218205 - MER41-int LTR ERV1 -5034 912 768 941 210 7 21 chr2 37469646 37469952 -213217902 - MER41-int LTR ERV1 -4466 1480 355 * 225 81 54 0 chr2 37469956 37469993 -213217861 - L1M4 LINE L1 -441 5733 5695 * 473 61 0 0 chr2 37469960 37470026 -213217828 - L1P4 LINE L1 -439 5727 5662 3472 214 50 43 chr2 37470029 37470980 -213216874 - MER41-int LTR ERV1 -4832 1431 474 1588 175 102 57 chr2 37471334 37471756 -213216098 - LTR8A LTR ERV1 0 727 287 14014 138 25 9 chr2 37471805 37473566 -213214288 + L1MA3 LINE L1 769 2579 -4986 3122 74 36 2 chr2 37473566 37474013 -213213841 + L1PA13 LINE L1 5696 6157 -6 14014 138 25 9 chr2 37474013 37474626 -213213228 + L1MA3 LINE L1 2579 3181 -4384 1321 201 25 11 chr2 37474634 37474908 -213212946 + AluJb SINE Alu 9 286 -26 15138 141 29 22 chr2 37474921 37475239 -213212615 + L1MA3 LINE L1 3168 3482 -4242 2155 113 17 10 chr2 37475239 37475541 -213212313 + AluSx SINE Alu 1 304 -8 15138 141 29 22 chr2 37475541 37475569 -213212285 + L1MA3 LINE L1 3482 3508 -4216 240 86 0 0 chr2 37475569 37475604 -213212250 + (CA)n Simple_repeat Simple_repeat 2 36 0 15138 141 29 22 chr2 37475604 37475958 -213211896 + L1MA3 LINE L1 3508 3858 -3866 408 55 0 0 chr2 37475958 37476013 -213211841 + (TA)n Simple_repeat Simple_repeat 1 55 0 15138 141 29 22 chr2 37476013 37477463 -213210391 + L1MA3 LINE L1 3858 5296 -2428 234 0 0 0 chr2 37477463 37477489 -213210365 + (CAA)n Simple_repeat Simple_repeat 2 27 0 15138 141 29 22 chr2 37477489 37479838 -213208016 + L1MA3 LINE L1 5296 7716 -8 461 211 55 45 chr2 37479840 37479999 -213207855 - LTR8 LTR ERV1 -387 154 1 269 170 0 0 chr2 37480040 37480087 -213207767 + L1ME LINE L1 5544 5590 -531 2473 34 20 7 chr2 37480370 37480664 -213207190 + AluY SINE Alu 1 298 -13 261 314 41 8 chr2 37480670 37480791 -213207063 - LTR33A LTR ERVL -102 421 297 255 267 156 0 chr2 37480928 37481018 -213206836 - LTR33A LTR ERVL -361 162 59 22 80 0 0 chr2 37481104 37481154 -213206700 + AT_rich Low_complexity Low_complexity 1 50 0 678 303 76 16 chr2 37481255 37481572 -213206282 + MLT1I LTR MaLR 74 409 0 725 188 23 0 chr2 37481770 37481903 -213205951 + Tigger3(Golem) DNA MER2_type 1 136 -2893 4634 133 50 12 chr2 37481913 37482747 -213205107 + Tigger3(Golem) DNA MER2_type 2163 3028 -1 223 197 79 26 chr2 37482750 37482826 -213205028 + MIR SINE MIR 183 262 0 2066 144 71 9 chr2 37483586 37483980 -213203874 - MSTB1 LTR MaLR -21 411 1 1956 137 7 13 chr2 37484011 37484340 -213203514 - AluSx SINE Alu 0 312 1 375 248 120 0 chr2 37485449 37485566 -213202288 - MIR SINE MIR -14 248 118 337 296 65 69 chr2 37485756 37485925 -213201929 + L1MC/D LINE L1 5556 5725 -2083 1626 187 3 38 chr2 37485925 37486241 -213201613 + AluJb SINE Alu 1 305 -7 337 296 65 69 chr2 37486241 37486331 -213201523 + L1MC/D LINE L1 5725 5814 -1994 466 365 108 8 chr2 37486860 37487230 -213200624 + HAL1b LINE L1 429 835 -513 2465 217 83 39 chr2 37487230 37488069 -213199785 + L1ME2 LINE L1 4992 5889 -275 1478 201 14 21 chr2 37488069 37488352 -213199502 + AluJo SINE Alu 21 301 -11 2465 217 83 39 chr2 37488352 37488631 -213199223 + L1ME2 LINE L1 5889 6154 -10 247 234 26 0 chr2 37488823 37488900 -213198954 + L1MC4 LINE L1 7963 8041 -1 453 305 16 56 chr2 37489204 37489453 -213198401 + L1M4 LINE L1 2154 2392 -3754 335 257 46 0 chr2 37489459 37489568 -213198286 + MER3 DNA MER1_type 43 156 -53 2268 101 0 22 chr2 37489933 37490250 -213197604 + AluSx SINE Alu 1 310 -2 1714 181 86 0 chr2 37492052 37492389 -213195465 - MER47A DNA MER2_type 0 366 1 244 242 16 16 chr2 37492928 37492990 -213194864 - L2 LINE L2 -1 3271 3210 495 243 52 37 chr2 37493451 37493587 -213194267 + MIR3 SINE MIR 33 170 -38 540 305 176 0 chr2 37493932 37494142 -213193712 - MIR SINE MIR -5 257 11 221 136 0 23 chr2 37494176 37494220 -213193634 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 28 61 0 0 chr2 37494249 37494298 -213193556 + AT_rich Low_complexity Low_complexity 1 49 0 3673 151 39 5 chr2 37495394 37496064 -213191790 - L1MB2 LINE L1 -39 6132 5440 1699 222 35 61 chr2 37496191 37496486 -213191368 + L1ME3 LINE L1 5587 5888 -274 1868 164 0 13 chr2 37496486 37496784 -213191070 + AluJb SINE Alu 1 294 -18 1699 222 35 61 chr2 37496784 37496823 -213191031 + L1ME3 LINE L1 5888 5926 -236 1713 156 51 27 chr2 37496823 37497157 -213190697 + MER2 DNA MER2_type 1 342 -2 1699 222 35 61 chr2 37497157 37497392 -213190462 + L1ME3 LINE L1 5926 6142 -20 204 40 0 0 chr2 37497494 37497519 -213190335 + (A)n Simple_repeat Simple_repeat 1 25 0 688 138 0 48 chr2 37497596 37497741 -213190113 + SVA Other Other 424 561 -825 1002 273 109 35 chr2 37498551 37499238 -213188616 + L2 LINE L2 2572 3303 -10 381 273 10 10 chr2 37499694 37499793 -213188061 + MER58 DNA MER1_type 1 99 -116 240 35 0 0 chr2 37499794 37499823 -213188031 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 353 192 27 0 chr2 37499829 37499902 -213187952 + MER58 DNA MER1_type 2346 2420 0 398 338 46 27 chr2 37500240 37500503 -213187351 + MLT1J LTR MaLR 1 268 -243 298 264 23 0 chr2 37500767 37500854 -213187000 - MER58C DNA MER1_type -10 205 117 337 148 30 1 chr2 37501036 37501105 -213186749 - MER58 DNA MER1_type -10 2410 2342 216 0 0 0 chr2 37501105 37501129 -213186725 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4502 147 28 33 chr2 37501215 37501463 -213186391 + L1MA9 LINE L1 5433 5681 -631 1653 149 36 29 chr2 37501463 37501738 -213186116 - AluJo SINE Alu -35 277 1 4502 147 28 33 chr2 37501738 37502227 -213185627 + L1MA9 LINE L1 5681 6168 -144 378 0 0 0 chr2 37502227 37502269 -213185585 + (CA)n Simple_repeat Simple_repeat 1 42 0 4502 147 28 33 chr2 37502269 37502409 -213185445 + L1MA9 LINE L1 6168 6307 -5 670 313 48 57 chr2 37502614 37503292 -213184562 - L2 LINE L2 -1 3271 2599 406 303 89 31 chr2 37503298 37503648 -213184206 - L1M4 LINE L1 -1300 4846 4477 2011 109 12 70 chr2 37503738 37504068 -213183786 - AluSx SINE Alu -1 311 1 201 39 0 0 chr2 37504570 37504596 -213183258 + (CA)n Simple_repeat Simple_repeat 2 27 0 230 366 36 36 chr2 37505106 37505327 -213182527 + L3 LINE CR1 57 277 -1300 222 327 131 0 chr2 37505818 37505925 -213181929 + L3 LINE CR1 1440 1560 -17 187 308 0 15 chr2 37505951 37506016 -213181838 - L2 LINE L2 -208 3064 3001 375 232 12 0 chr2 37506104 37506186 -213181668 + LTR67 LTR ERVL 453 535 -22 259 269 0 0 chr2 37507971 37508038 -213179816 - L3 LINE CR1 -346 1231 1165 1031 306 47 59 chr2 37509039 37509529 -213178325 - L1MEd LINE L1 -5513 606 123 481 254 104 6 chr2 37509662 37509835 -213178019 - L1ME LINE L1 -339 5782 5593 4623 150 21 11 chr2 37510226 37511026 -213176828 + L1MB7 LINE L1 5366 6173 -11 879 310 69 14 chr2 37512791 37513281 -213174573 - L2 LINE L2 -1080 2234 1718 966 121 34 0 chr2 37513281 37513430 -213174424 - L1MA4 LINE L1 -99 6201 6048 * 1058 288 76 53 chr2 37513417 37514429 -213173425 - L1MEc LINE L1 -4659 1602 564 2396 71 0 10 chr2 37514429 37514725 -213173129 - AluY SINE Alu -13 298 6 1058 288 76 53 chr2 37514725 37514766 -213173088 - L1MEc LINE L1 -5697 564 525 537 331 31 31 chr2 37514991 37515347 -213172507 - L1MEc LINE L1 -5619 451 96 5510 143 29 16 chr2 37515354 37516240 -213171614 - L1MC1 LINE L1 0 6333 5436 401 331 101 65 chr2 37517456 37518042 -213169812 - L2 LINE L2 0 3272 2591 1863 198 13 16 chr2 37518042 37518415 -213169439 + L1MB7 LINE L1 5794 6165 -19 1962 171 5 63 chr2 37518590 37518987 -213168867 - MLT1A2 LTR MaLR 0 374 1 643 295 87 0 chr2 37520192 37520420 -213167434 + MIR SINE MIR 15 261 -1 434 271 146 88 chr2 37520802 37521102 -213166752 - L1ME LINE L1 -448 5673 5341 237 33 0 0 chr2 37521102 37521132 -213166722 + (TG)n Simple_repeat Simple_repeat 2 31 0 434 271 146 88 chr2 37521132 37521225 -213166629 - L1ME LINE L1 -780 5341 5255 783 158 0 8 chr2 37521928 37522048 -213165806 + FLAM_C SINE Alu 12 130 -13 23 33 0 0 chr2 37522083 37522113 -213165741 + AT_rich Low_complexity Low_complexity 1 30 0 380 325 26 16 chr2 37522194 37522385 -213165469 - L1ME LINE L1 -2004 4142 3950 212 265 162 8 chr2 37522422 37522539 -213165315 - MIR SINE MIR -50 212 78 1018 245 15 8 chr2 37522655 37522916 -213164938 - L1MD3 LINE L1 -12 7983 7721 4215 124 86 91 chr2 37522916 37524304 -213163550 + pTR5 LTR ERV1 66 2438 0 3328 205 77 24 chr2 37524304 37525185 -213162669 - L1MC4 LINE L1 -410 7632 6705 288 0 0 0 chr2 37525186 37525218 -213162636 + (CA)n Simple_repeat Simple_repeat 2 33 0 486 327 0 0 chr2 37525228 37525393 -213162461 - L1M4 LINE L1 -1931 4215 4051 450 269 40 17 chr2 37525395 37525570 -213162284 - L1M4 LINE L1 -2028 4118 3940 234 250 88 70 chr2 37525933 37526185 -213161669 + L1MEc LINE L1 2125 2344 -3871 615 313 14 15 chr2 37526262 37526508 -213161346 + MLT1H LTR MaLR 81 314 -95 829 298 64 35 chr2 37528161 37528310 -213159544 - L2 LINE L2 -2 3311 3168 2415 61 0 0 chr2 37528310 37528605 -213159249 + AluY SINE Alu 1 295 -16 829 298 64 35 chr2 37528605 37528831 -213159023 - L2 LINE L2 -145 3168 2925 659 146 54 0 chr2 37529169 37529299 -213158555 - L1MB4 LINE L1 0 6180 6044 624 284 54 27 chr2 37529418 37529640 -213158214 + MIR SINE MIR 21 248 -14 2291 80 0 7 chr2 37529651 37529962 -213157892 - AluSx SINE Alu 0 310 2 180 0 0 0 chr2 37531473 37531493 -213156361 + (A)n Simple_repeat Simple_repeat 1 20 0 198 143 0 0 chr2 37531557 37531592 -213156262 + (TG)n Simple_repeat Simple_repeat 1 35 0 261 347 55 15 chr2 37533254 37533438 -213154416 + MIR SINE MIR 1 141 -67 2300 78 3 0 chr2 37533499 37533813 -213154041 + AluSq SINE Alu 1 315 0 299 291 87 0 chr2 37534044 37534147 -213153707 + MIR3 SINE MIR 93 204 -4 186 133 0 0 chr2 37534354 37534384 -213153470 + (TA)n Simple_repeat Simple_repeat 1 30 0 495 96 0 0 chr2 37534423 37534506 -213153348 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 491 260 0 0 chr2 37534694 37534829 -213153025 + MIR SINE MIR 50 183 -63 222 171 0 0 chr2 37535211 37535252 -213152602 + (TGG)n Simple_repeat Simple_repeat 1 41 0 1681 176 22 0 chr2 37535297 37535575 -213152279 + AluJo SINE Alu 1 284 -28 207 0 0 0 chr2 37535578 37535601 -213152253 + (TAA)n Simple_repeat Simple_repeat 2 24 0 955 254 17 4 chr2 37535604 37535840 -213152014 - MIR SINE MIR -8 254 16 514 283 225 19 chr2 37536714 37537088 -213150766 - L2 LINE L2 -12 3301 2851 2178 101 20 3 chr2 37538757 37539063 -213148791 - AluSx SINE Alu -1 311 1 345 306 108 13 chr2 37539066 37539223 -213148631 + MIR SINE MIR 91 262 0 1067 205 5 45 chr2 37540651 37540875 -213146979 - MER20 DNA MER1_type -4 215 1 184 167 0 0 chr2 37541774 37541810 -213146044 + MIR SINE MIR 81 116 -92 247 222 124 81 chr2 37542015 37542200 -213145654 - MLT1L LTR MaLR -65 550 358 378 248 35 55 chr2 37542355 37542557 -213145297 - MLT1L LTR MaLR -410 205 8 253 261 29 0 chr2 37542695 37542764 -213145090 + A-rich Low_complexity Low_complexity 4 74 0 348 255 20 41 chr2 37543645 37543705 -213144149 + MER5B DNA MER1_type 1 60 -118 2258 117 0 0 chr2 37543705 37544005 -213143849 + AluSx SINE Alu 1 300 -12 348 255 20 41 chr2 37544005 37544042 -213143812 + MER5B DNA MER1_type 60 96 -82 643 243 164 9 chr2 37544071 37544297 -213143557 + MIR SINE MIR 1 261 -1 313 314 83 54 chr2 37544517 37544867 -213142987 - L2 LINE L2 -340 2974 2615 491 203 68 0 chr2 37545234 37545247 -213142607 - L1MA10 LINE L1 -40 6294 6282 2673 200 26 64 chr2 37545247 37545938 -213141916 - L1ME1 LINE L1 -44 6122 5458 352 252 153 0 chr2 37546282 37546393 -213141461 + MIR SINE MIR 20 147 -115 278 258 43 54 chr2 37546442 37546535 -213141319 - L2 LINE L2 0 3313 3222 326 78 31 31 chr2 37547329 37547393 -213140461 - L1MB8 LINE L1 -3 6175 6112 2160 86 7 0 chr2 37547394 37547674 -213140180 + AluSg SINE Alu 1 282 -28 245 207 0 0 chr2 37547678 37547731 -213140123 - L1MB7 LINE L1 -44 6134 6082 1790 229 48 47 chr2 37547795 37548615 -213139239 - L2 LINE L2 -3 3269 2455 614 211 100 39 chr2 37549136 37549316 -213138538 - MER63A DNA MER1_type -19 191 1 605 191 140 22 chr2 37549412 37549548 -213138306 - MER97b DNA MER1_type? -874 179 28 293 180 57 67 chr2 37549558 37549662 -213138192 + MIR SINE MIR 47 163 -62 262 370 24 6 chr2 37549814 37549979 -213137875 + L2 LINE L2 2914 3081 -191 2199 114 3 0 chr2 37550097 37550396 -213137458 + AluSg1 SINE Alu 3 302 -7 735 212 22 54 chr2 37550420 37550604 -213137250 - MER5B DNA MER1_type 0 178 1 242 285 97 56 chr2 37550669 37550813 -213137041 + L2 LINE L2 3160 3309 -4 2488 88 0 0 chr2 37551704 37552012 -213135842 - AluSg SINE Alu -2 308 1 1935 78 51 31 chr2 37552020 37552172 -213135682 - AluY SINE Alu -12 299 152 549 0 0 0 chr2 37552172 37552233 -213135621 + (TG)n Simple_repeat Simple_repeat 2 62 0 1935 78 51 31 chr2 37552233 37552373 -213135481 - AluY SINE Alu -159 152 1 2911 153 9 13 chr2 37552612 37553077 -213134777 - MLT1C LTR MaLR -4 463 1 332 293 47 47 chr2 37553183 37553289 -213134565 + MIR SINE MIR 17 122 -86 5608 135 23 39 chr2 37554020 37554494 -213133360 + L1MA9 LINE L1 3984 4464 -1682 1588 185 0 11 chr2 37554494 37554780 -213133074 + AluJb SINE Alu 1 283 -29 5608 135 23 39 chr2 37554780 37555318 -213132536 + L1MA9 LINE L1 4464 4980 -1166 2964 127 46 40 chr2 37555318 37555564 -213132290 + L1MA9 LINE L1 5784 6027 -285 2138 128 0 3 chr2 37555564 37555861 -213131993 + AluSq SINE Alu 1 296 -17 2964 127 46 40 chr2 37555861 37556129 -213131725 + L1MA9 LINE L1 6027 6307 -5 285 323 201 38 chr2 37556501 37556870 -213130984 + L2 LINE L2 2842 3270 -2 299 322 120 33 chr2 37557081 37557264 -213130590 + MIR3 SINE MIR 1 199 -9 47 78 0 0 chr2 37557746 37557849 -213130005 + AT_rich Low_complexity Low_complexity 1 103 0 809 299 75 9 chr2 37558090 37558435 -213129419 - L1ME LINE L1 -399 5722 5355 1090 190 62 0 chr2 37558592 37558803 -213129051 + AluJo SINE Alu 86 309 -3 1677 82 0 0 chr2 37558859 37559067 -213128787 - AluSq SINE Alu -16 297 90 1849 175 13 60 chr2 37560095 37560478 -213127376 - MLT1A1 LTR MaLR 0 365 1 2129 116 10 0 chr2 37560628 37560922 -213126932 + AluSx SINE Alu 2 298 -14 382 227 64 39 chr2 37561064 37561267 -213126587 + L1ME4a LINE L1 5772 5979 -142 2012 101 87 3 chr2 37561398 37561686 -213126168 + AluSx SINE Alu 1 312 0 241 333 11 11 chr2 37562116 37562206 -213125648 + (CA)n Simple_repeat Simple_repeat 1 90 0 1521 150 84 60 chr2 37562507 37562771 -213125083 + Tigger3(Golem) DNA MER2_type 1 276 -2753 2269 101 0 7 chr2 37562771 37563068 -213124786 - AluSx SINE Alu -17 295 1 1521 150 84 60 chr2 37563068 37563136 -213124718 + Tigger3(Golem) DNA MER2_type 276 341 -2688 4296 119 19 15 chr2 37563142 37563369 -213124485 + Tigger3(Golem) DNA MER2_type 2341 2566 -463 2884 10 0 0 chr2 37563369 37563680 -213124174 + AluYa5 SINE Alu 1 311 0 4296 119 19 15 chr2 37563680 37564138 -213123716 + Tigger3(Golem) DNA MER2_type 2566 3029 0 27 49 0 0 chr2 37564212 37564253 -213123601 + AT_rich Low_complexity Low_complexity 1 41 0 1106 243 150 57 chr2 37564812 37564851 -213123003 - MLT1J LTR MaLR 0 511 477 1918 134 33 16 chr2 37564851 37565157 -213122697 + AluSx SINE Alu 1 311 -1 1106 243 150 57 chr2 37565157 37565380 -213122474 - MLT1J LTR MaLR -34 477 276 3309 188 24 16 chr2 37565380 37566009 -213121845 - LTR27 LTR ERV1 0 636 3 1106 243 150 57 chr2 37566009 37566105 -213121749 - MLT1J LTR MaLR -235 276 190 2300 71 0 4 chr2 37566105 37566410 -213121444 - AluSc SINE Alu 0 304 1 1106 243 150 57 chr2 37566410 37566501 -213121353 - MLT1J LTR MaLR -321 190 17 753 325 90 38 chr2 37567441 37567887 -213119967 - L2 LINE L2 0 3272 2804 263 266 0 0 chr2 37567952 37568016 -213119838 - MLT1K LTR MaLR -11 577 514 315 130 0 0 chr2 37568146 37568200 -213119654 + (TC)n Simple_repeat Simple_repeat 1 54 0 241 330 19 19 chr2 37568760 37568853 -213119001 - L2 LINE L2 -559 2755 2660 804 167 107 6 chr2 37568853 37569021 -213118833 + MER5A DNA MER1_type 1 185 -4 241 330 19 19 chr2 37569021 37569033 -213118821 - L2 LINE L2 -653 2661 2650 246 266 0 25 chr2 37569538 37569617 -213118237 + T-rich Low_complexity Low_complexity 3 79 0 2270 89 10 0 chr2 37569736 37570028 -213117826 + AluSx SINE Alu 18 312 0 324 188 232 0 chr2 37571631 37571700 -213116154 - Tigger5 DNA MER2_type -2 2321 2237 338 173 0 0 chr2 37571713 37571765 -213116089 - Tigger5 DNA MER2_type -2271 52 1 185 349 81 0 chr2 37571963 37572049 -213115805 - L2 LINE L2 -227 3045 2953 217 289 0 0 chr2 37572914 37572966 -213114888 + (CA)n Simple_repeat Simple_repeat 1 52 0 253 279 155 23 chr2 37573130 37573259 -213114595 + MIR SINE MIR 46 191 -71 416 97 0 16 chr2 37573416 37573478 -213114376 - L2 LINE L2 -69 3244 3184 24 0 0 0 chr2 37574011 37574035 -213113819 + AT_rich Low_complexity Low_complexity 1 24 0 811 280 182 18 chr2 37576527 37576966 -213110888 - L3 LINE CR1 -4 1573 1063 664 263 138 36 chr2 37578196 37578668 -213109186 - L1MEc LINE L1 -4731 1665 1146 * 15864 201 31 12 chr2 37578641 37583537 -213104317 - L1PA16 LINE L1 -2 6233 1251 487 305 48 1 chr2 37583551 37583787 -213104067 - L1PA16 LINE L1 -6558 280 1 514 296 77 25 chr2 37584339 37584535 -213103319 - MIR SINE MIR -44 218 13 2403 94 0 0 chr2 37585383 37585682 -213102172 + AluSg SINE Alu 6 304 -6 212 313 50 0 chr2 37585726 37585806 -213102048 - MIR SINE MIR -82 180 97 899 122 15 0 chr2 37585815 37585946 -213101908 + AluSq/x SINE Alu 1 133 -179 2173 128 0 0 chr2 37585951 37586249 -213101605 + AluSx SINE Alu 1 298 -14 4989 76 6 5 chr2 37587597 37588226 -213099628 + L1PA11 LINE L1 5545 6174 0 250 304 86 58 chr2 37588684 37588938 -213098916 + MIR SINE MIR 3 262 0 1135 255 106 20 chr2 37590288 37590793 -213097061 - L1MC4a LINE L1 -443 7365 6882 2460 83 0 0 chr2 37590793 37591095 -213096759 - AluSp SINE Alu -11 302 1 1135 255 106 20 chr2 37591095 37591162 -213096692 - L1MC4a LINE L1 -926 6882 6822 339 308 0 53 chr2 37593014 37593147 -213094707 - L2 LINE L2 0 3313 3188 434 275 106 7 chr2 37594634 37594776 -213093078 - MIR SINE MIR -10 252 97 2403 94 0 0 chr2 37594821 37595130 -213092724 - AluSc SINE Alu 0 309 1 2382 76 0 7 chr2 37596296 37596597 -213091257 + AluSc SINE Alu 1 299 -10 340 220 55 11 chr2 37596718 37596809 -213091045 - MIR SINE MIR -84 178 84 242 242 0 32 chr2 37597240 37597302 -213090552 - L2 LINE L2 0 3272 3213 300 274 49 20 chr2 37597993 37598103 -213089751 + MER5A DNA MER1_type 63 164 -14 2146 108 3 0 chr2 37598421 37598708 -213089146 - AluSp SINE Alu -7 306 19 1951 211 15 66 chr2 37599848 37600087 -213087767 + MLT1D LTR MaLR 1 251 -254 2241 128 77 8 chr2 37600087 37600252 -213087602 - THE1C LTR MaLR 0 375 223 276 30 0 0 chr2 37600252 37600285 -213087569 + (GA)n Simple_repeat Simple_repeat 1 33 0 2241 128 77 8 chr2 37600285 37600470 -213087384 - THE1C LTR MaLR -152 223 1 1951 211 15 66 chr2 37600470 37600762 -213087092 + MLT1D LTR MaLR 251 505 0 1692 181 7 13 chr2 37601084 37601383 -213086471 + AluJo SINE Alu 1 297 -15 296 186 17 0 chr2 37601411 37601470 -213086384 - MIR SINE MIR -102 160 101 203 214 79 67 chr2 37601774 37601863 -213085991 + L2 LINE L2 3171 3260 -12 199 429 36 9 chr2 37602641 37602753 -213085101 - L3b LINE CR1 -29 1554 1440 2167 123 0 0 chr2 37602987 37603289 -213084565 + AluSx SINE Alu 1 302 -10 692 272 9 60 chr2 37603297 37603514 -213084340 - MIR SINE MIR -21 241 36 274 257 10 79 chr2 37603689 37603790 -213084064 - MIR SINE MIR -58 204 111 928 183 24 28 chr2 37604499 37604712 -213083142 - L1MB7 LINE L1 0 6184 5973 419 228 20 20 chr2 37604972 37605073 -213082781 - L2 LINE L2 0 3313 3213 265 230 57 98 chr2 37605959 37606086 -213081768 + L1ME LINE L1 5279 5410 -711 2138 117 7 0 chr2 37606086 37606393 -213081461 + AluSg SINE Alu 2 310 0 265 230 57 98 chr2 37606393 37606561 -213081293 + L1ME LINE L1 5410 5665 -456 1741 118 3 38 chr2 37606962 37607103 -213080751 + AluJo SINE Alu 1 128 -184 2102 96 7 0 chr2 37607103 37607394 -213080460 + AluSp SINE Alu 12 304 -9 1741 118 3 38 chr2 37607394 37607540 -213080314 + AluJo SINE Alu 128 278 -34 185 65 32 0 chr2 37607545 37607576 -213080278 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 26 0 0 27 chr2 37608288 37608300 -213079554 + AT_rich Low_complexity Low_complexity 1 12 -24 1760 102 84 7 chr2 37608300 37608574 -213079280 + AluSx SINE Alu 1 295 -17 26 0 0 27 chr2 37608574 37608598 -213079256 + AT_rich Low_complexity Low_complexity 12 36 0 262 362 43 21 chr2 37610828 37610969 -213076885 - L3 LINE CR1 -1 1576 1433 253 125 0 0 chr2 37611049 37611081 -213076773 + Charlie1 DNA MER1_type 1 32 -2729 1016 185 68 136 chr2 37611102 37611356 -213076498 + Charlie1 DNA MER1_type 2343 2613 -148 1920 128 21 0 chr2 37611356 37611645 -213076209 + AluSx SINE Alu 1 295 -17 2379 61 3 6 chr2 37611646 37611957 -213075897 + AluY SINE Alu 1 310 -1 1016 185 68 136 chr2 37611957 37612126 -213075728 + Charlie1 DNA MER1_type 2612 2739 -22 915 324 138 18 chr2 37612148 37612777 -213075077 - L3 LINE CR1 -304 1273 569 210 309 36 0 chr2 37612961 37613016 -213074838 - L2 LINE L2 -15 3257 3201 532 246 273 0 chr2 37614048 37614235 -213073619 + MIR SINE MIR 11 248 -14 1870 94 30 11 chr2 37614291 37614557 -213073297 - L1PA11 LINE L1 -1 6173 5903 495 281 16 0 chr2 37615338 37615459 -213072395 - MIR3 SINE MIR -42 166 44 217 224 12 12 chr2 37615636 37615721 -213072133 + GA-rich Low_complexity Low_complexity 4 88 0 204 327 0 0 chr2 37616047 37616099 -213071755 + MIR SINE MIR 204 255 -7 409 314 51 29 chr2 37616136 37616311 -213071543 + L3 LINE CR1 1387 1565 -12 22 0 0 0 chr2 37618004 37618026 -213069828 + AT_rich Low_complexity Low_complexity 1 22 0 333 320 176 40 chr2 37618373 37619050 -213068804 - L2 LINE L2 -542 2772 2004 293 245 75 21 chr2 37619098 37619192 -213068662 + MER5B DNA MER1_type 1 99 -79 360 196 0 54 chr2 37619201 37619289 -213068565 + MER5A DNA MER1_type 4 85 -104 286 233 278 0 chr2 37620064 37620154 -213067700 - MER5A DNA MER1_type -6 183 69 477 240 25 16 chr2 37622372 37622493 -213065361 + MIR3 SINE MIR 33 154 -54 535 280 97 11 chr2 37623999 37624185 -213063669 + MIR3 SINE MIR 4 205 -3 209 230 108 0 chr2 37624586 37624660 -213063194 - MIR3 SINE MIR -11 197 116 225 192 24 0 chr2 37625431 37625490 -213062364 - MIR SINE MIR -87 121 59 2205 183 34 28 chr2 37626227 37626729 -213061125 + MLT1D LTR MaLR 1 505 0 563 242 0 24 chr2 37626882 37627006 -213060848 + MER5B DNA MER1_type 8 128 -50 245 252 38 137 chr2 37626899 37627030 -213060824 - MER5A DNA MER1_type -24 165 48 * 755 242 13 0 chr2 37627392 37627549 -213060305 + MER5B DNA MER1_type 13 171 -7 22 0 0 0 chr2 37627742 37627764 -213060090 + AT_rich Low_complexity Low_complexity 1 22 0 467 238 252 0 chr2 37627782 37627933 -213059921 + MER5A DNA MER1_type 1 189 0 222 276 75 52 chr2 37628994 37629128 -213058726 - L3 LINE CR1 -187 1390 1254 226 344 0 16 chr2 37629555 37629616 -213058238 - L3b LINE CR1 -10 1573 1514 1882 204 23 72 chr2 37629980 37630180 -213057674 - MER82 DNA MER2_type 0 653 445 2021 63 0 26 chr2 37630180 37630533 -213057321 - AluSq SINE Alu 0 365 20 1882 204 23 72 chr2 37630533 37630806 -213057048 - MER82 DNA MER2_type -208 445 202 21 0 0 0 chr2 37630945 37630966 -213056888 + AT_rich Low_complexity Low_complexity 1 21 0 1034 198 0 29 chr2 37631108 37631315 -213056539 - MER82 DNA MER2_type -452 201 1 688 135 0 0 chr2 37631507 37631603 -213056251 - AluJ/FLAM SINE Alu -215 97 2 23 33 0 0 chr2 37631774 37631804 -213056050 + AT_rich Low_complexity Low_complexity 1 30 0 416 186 62 44 chr2 37631984 37632097 -213055757 - MER69A DNA AcHobo -1 176 62 388 304 179 29 chr2 37632182 37632668 -213055186 - L2 LINE L2 -677 2637 2079 1971 128 0 13 chr2 37633312 37633617 -213054237 + AluSg SINE Alu 1 301 -9 1583 183 3 17 chr2 37634268 37634569 -213053285 + AluJo SINE Alu 1 297 -15 2045 121 3 0 chr2 37634603 37634901 -213052953 + AluSx SINE Alu 1 299 -13 2265 101 0 0 chr2 37634902 37635208 -213052646 + AluSg SINE Alu 1 306 -4 694 148 0 101 chr2 37635241 37635390 -213052464 - MER45A DNA AcHobo -44 134 1 293 204 93 0 chr2 37635877 37635958 -213051896 - MIR SINE MIR -75 133 40 1652 126 112 7 chr2 37636363 37636640 -213051214 + AluSg1 SINE Alu 1 306 -3 246 274 128 34 chr2 37637631 37637748 -213050106 - LTR67 LTR ERVL -6 551 424 266 291 11 54 chr2 37638104 37638217 -213049637 - LTR67 LTR ERVL -363 194 37 378 143 29 43 chr2 37638831 37638901 -213048953 + MER81 DNA DNA 41 109 -5 409 256 8 53 chr2 37639029 37639162 -213048692 - MIR3 SINE MIR -79 129 3 2253 98 0 0 chr2 37639387 37639683 -213048171 + AluSc SINE Alu 1 296 -13 503 128 84 2 chr2 37639754 37639847 -213048007 + L1MB4 LINE L1 6046 6151 -29 1913 156 0 3 chr2 37639858 37640165 -213047689 + AluJb SINE Alu 1 306 -6 240 35 0 0 chr2 37640836 37640865 -213046989 + (CA)n Simple_repeat Simple_repeat 1 29 0 228 241 13 63 chr2 37641084 37641163 -213046691 + MIR3 SINE MIR 128 202 -6 2031 99 27 3 chr2 37641380 37641554 -213046300 - AluSc SINE Alu -8 301 116 188 0 74 0 chr2 37641554 37641581 -213046273 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2031 99 27 3 chr2 37641581 37641700 -213046154 - AluSc SINE Alu -193 116 1 189 360 72 14 chr2 37642694 37642833 -213045021 + MIR SINE MIR 108 254 -8 1791 146 11 0 chr2 37644249 37644552 -213043302 - AluSx SINE Alu 0 306 1 1105 135 0 0 chr2 37644683 37644846 -213043008 + FRAM SINE Alu 2 164 -12 2089 98 3 3 chr2 37644847 37645142 -213042712 + AluSp SINE Alu 1 295 -18 1990 143 0 0 chr2 37645470 37645771 -213042083 - AluSx SINE Alu -11 301 1 355 286 246 6 chr2 37646292 37646463 -213041391 + L3 LINE CR1 1318 1529 -48 2294 101 0 9 chr2 37646497 37646813 -213041041 - AluSq SINE Alu 0 313 1 366 288 100 78 chr2 37647361 37647686 -213040168 + L2 LINE L2 1552 1868 -1446 1521 151 76 14 chr2 37647686 37647977 -213039877 - AluSc SINE Alu 0 309 1 366 288 100 78 chr2 37647977 37648005 -213039849 + L2 LINE L2 1868 1894 -1420 2066 124 3 0 chr2 37648005 37648303 -213039551 + AluSx SINE Alu 1 299 -13 366 288 100 78 chr2 37648303 37648399 -213039455 + L2 LINE L2 1894 2012 -1302 301 342 60 0 chr2 37648405 37648522 -213039332 + L3 LINE CR1 1453 1576 -1 1875 129 21 0 chr2 37649897 37650184 -213037670 + AluSx SINE Alu 1 293 -19 509 310 32 13 chr2 37650195 37650353 -213037501 + MER5B DNA MER1_type 18 178 0 1101 214 66 7 chr2 37650574 37650863 -213036991 - MER114 LTR ERV -342 306 1 1818 109 12 75 chr2 37651014 37651335 -213036519 + AluSx SINE Alu 1 301 -11 363 183 14 0 chr2 37651580 37651651 -213036203 - MER94 DNA DNA -62 72 1 819 307 121 22 chr2 37651728 37652308 -213035546 - L2 LINE L2 -2527 787 151 221 303 11 34 chr2 37652363 37652452 -213035402 - MIR3 SINE MIR -14 194 108 187 250 0 0 chr2 37653197 37653229 -213034625 - L2 LINE L2 -98 3174 3143 294 295 51 0 chr2 37653333 37653411 -213034443 - MIR SINE MIR -1 261 180 362 106 0 0 chr2 37653430 37653477 -213034377 - MSTD LTR MaLR 0 457 411 * 1222 206 16 24 chr2 37653452 37653700 -213034154 - MSTD LTR MaLR -150 246 1 388 350 7 0 chr2 37653704 37653844 -213034010 - MIR SINE MIR -105 157 17 326 336 19 10 chr2 37654129 37654233 -213033621 + L2 LINE L2 2974 3078 -194 1829 134 35 14 chr2 37654617 37654907 -213032947 - AluSx SINE Alu -16 296 1 398 318 211 16 chr2 37654949 37655333 -213032521 - L2 LINE L2 -5 3267 2809 238 282 14 0 chr2 37655341 37655412 -213032442 - MLT1L LTR MaLR 0 615 544 449 248 14 48 chr2 37657466 37657611 -213030243 - MIR3 SINE MIR -66 142 3 651 310 28 38 chr2 37658276 37658563 -213029291 + REP3 LTR ERV 3 286 -276 2049 136 3 0 chr2 37658565 37658867 -213028987 - AluSx SINE Alu -5 307 5 453 86 0 0 chr2 37658898 37658968 -213028886 + AluJ/FRAM SINE Alu 233 302 -10 394 270 132 11 chr2 37658990 37659164 -213028690 + REP3 LTR ERV 335 529 -33 1902 145 3 23 chr2 37659654 37659958 -213027896 - AluJb SINE Alu -14 298 1 2179 119 0 3 chr2 37659974 37660284 -213027570 - AluY SINE Alu 0 311 3 325 302 40 47 chr2 37660700 37660784 -213027070 - MIR SINE MIR -32 230 146 3438 153 64 11 chr2 37660784 37660981 -213026873 - L1MA5 LINE L1 -5 6295 6110 2425 58 10 10 chr2 37660981 37661289 -213026565 + AluY SINE Alu 1 308 -3 3438 153 64 11 chr2 37661289 37661730 -213026124 - L1MA5 LINE L1 -190 6110 5623 325 302 40 47 chr2 37661730 37661794 -213026060 - MIR SINE MIR -116 146 83 5087 238 45 8 chr2 37662713 37664245 -213023609 - L1MEc LINE L1 -2231 3984 2397 1336 132 0 0 chr2 37664250 37664439 -213023415 - AluSg/x SINE Alu -8 304 116 2037 137 0 3 chr2 37664476 37664795 -213023059 + AluSg SINE Alu 1 318 0 1914 257 51 28 chr2 37664796 37664835 -213023019 - L1MEc LINE L1 -4325 2071 2034 2096 73 3 108 chr2 37664835 37665176 -213022678 + AluY SINE Alu 1 305 -6 1914 257 51 28 chr2 37665176 37665887 -213021967 - L1MEc LINE L1 -4362 2034 1304 1371 273 92 25 chr2 37665888 37666398 -213021456 - L1MEc LINE L1 -5814 582 39 2476 77 0 0 chr2 37666488 37666798 -213021056 - AluSp SINE Alu -3 310 1 2691 62 5 50 chr2 37667160 37667561 -213020293 - L1PB1 LINE L1 0 6151 5769 * 6721 68 37 0 chr2 37667553 37668509 -213019345 - L1PA8 LINE L1 -2 6170 5205 855 166 104 19 chr2 37668592 37668725 -213019129 - MER93b LTR ERV1 0 373 253 2508 102 41 78 chr2 37668725 37669186 -213018668 + MLT2A1 LTR ERVL 1 444 0 855 166 104 19 chr2 37669186 37669368 -213018486 - MER93b LTR ERV1 -120 253 1 333 103 52 0 chr2 37669507 37669565 -213018289 + MLT1L LTR MaLR 216 276 -339 783 165 43 182 chr2 37669572 37669792 -213018062 - MLT1B LTR MaLR 0 390 205 414 290 95 37 chr2 37670479 37671039 -213016815 + L1MC/D LINE L1 3688 4289 -1857 911 114 8 0 chr2 37671117 37671248 -213016606 - FLAM_C SINE Alu 0 133 2 324 308 159 14 chr2 37671583 37671801 -213016053 + L1MC/D LINE L1 4741 5009 -1137 405 0 0 0 chr2 37671801 37671846 -213016008 + (CA)n Simple_repeat Simple_repeat 2 46 0 324 308 159 14 chr2 37671846 37671903 -213015951 + L1MC/D LINE L1 5009 5056 -1090 1356 165 88 11 chr2 37672045 37672318 -213015536 - AluJo SINE Alu -18 294 1 1352 231 181 31 chr2 37672771 37673256 -213014598 + MLT1E2 LTR MaLR 1 558 -68 463 275 46 61 chr2 37673271 37673617 -213014237 + L1MC/D LINE L1 5362 5702 -540 333 240 223 17 chr2 37674048 37674223 -213013631 + L2 LINE L2 3087 3297 -16 290 289 182 0 chr2 37674378 37674499 -213013355 - MIR SINE MIR -49 213 71 319 263 135 23 chr2 37675441 37675574 -213012280 - L2 LINE L2 -2 3311 3164 507 73 0 0 chr2 37680722 37680790 -213007064 + (CA)n Simple_repeat Simple_repeat 2 69 0 478 87 39 10 chr2 37681225 37681329 -213006525 + (TA)n Simple_repeat Simple_repeat 1 107 0 22 0 0 0 chr2 37685085 37685107 -213002747 + AT_rich Low_complexity Low_complexity 1 22 0 2373 97 0 3 chr2 37686040 37686350 -213001504 + AluSc SINE Alu 1 309 0 1276 224 48 3 chr2 37687182 37687513 -213000341 + L1MC4 LINE L1 7693 8038 -4 2278 114 0 0 chr2 37687712 37688020 -212999834 + AluSx SINE Alu 1 308 -4 256 216 0 0 chr2 37688752 37688803 -212999051 - MARNA DNA Mariner -120 466 416 202 237 17 34 chr2 37689358 37689417 -212998437 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 27 29 0 0 chr2 37690590 37690624 -212997230 + AT_rich Low_complexity Low_complexity 1 34 0 2668 205 74 57 chr2 37690862 37691539 -212996315 + L1ME2 LINE L1 5351 6015 -149 1893 159 128 16 chr2 37691539 37691922 -212995932 + MSTA LTR MaLR 3 428 0 773 124 7 58 chr2 37691925 37692062 -212995792 - FLAM_C SINE Alu -1 132 3 2668 205 74 57 chr2 37692062 37692174 -212995680 + L1ME2 LINE L1 6016 6158 -6 1850 113 68 11 chr2 37692230 37692535 -212995319 + AluSx SINE Alu 1 320 0 32 43 0 0 chr2 37693029 37693075 -212994779 + AT_rich Low_complexity Low_complexity 1 46 0 187 182 30 0 chr2 37693489 37693522 -212994332 - MIR SINE MIR -75 187 154 214 333 24 73 chr2 37693602 37693725 -212994129 - L2 LINE L2 -22 3250 3134 247 355 57 54 chr2 37694596 37695019 -212992835 - L2 LINE L2 -1294 2020 1597 776 231 35 0 chr2 37696262 37696431 -212991423 + MER58C DNA MER1_type 2 176 -39 297 0 0 0 chr2 37696569 37696602 -212991252 + (CA)n Simple_repeat Simple_repeat 1 33 0 5138 123 44 2 chr2 37696614 37697452 -212990402 - L1PA15 LINE L1 -8 6157 5285 * 14610 195 29 16 chr2 37697450 37697569 -212990285 - L1P4 LINE L1 -734 5431 5315 2317 55 41 3 chr2 37697569 37697860 -212989994 - AluY SINE Alu -9 302 1 14610 195 29 16 chr2 37697860 37699537 -212988317 - L1P4 LINE L1 -850 5315 3661 2279 98 0 19 chr2 37699537 37699852 -212988002 - AluSq SINE Alu -4 309 1 14610 195 29 16 chr2 37699852 37700409 -212987445 - L1P4 LINE L1 -2504 3661 3113 2217 106 0 0 chr2 37700409 37700691 -212987163 - AluSg SINE Alu -22 288 7 14610 195 29 16 chr2 37700691 37700915 -212986939 - L1P4 LINE L1 -3052 3113 2893 1453 190 31 17 chr2 37700915 37701204 -212986650 - AluJb SINE Alu -19 293 1 14610 195 29 16 chr2 37701204 37702023 -212985831 - L1P4 LINE L1 -3272 2893 1990 574 107 11 203 chr2 37702047 37702234 -212985620 + FRAM SINE Alu 18 168 -8 480 196 49 0 chr2 37702235 37702337 -212985517 - U6 snRNA snRNA 0 107 1 375 360 46 29 chr2 37702967 37703206 -212984648 + MIR SINE MIR 20 262 0 22 56 0 0 chr2 37704676 37704712 -212983142 + AT_rich Low_complexity Low_complexity 1 36 0 6121 123 118 13 chr2 37705291 37706405 -212981449 + Tigger3b DNA MER2_type 1 1231 0 789 256 6 0 chr2 37706514 37706694 -212981160 - MIR SINE MIR -50 212 32 409 350 13 6 chr2 37706746 37706903 -212980951 + L3 LINE CR1 1143 1300 -277 1866 210 82 41 chr2 37706913 37707428 -212980426 + MLT1F LTR MaLR 1 536 -6 782 256 0 0 chr2 37708248 37708404 -212979450 + AluY SINE Alu 133 288 -23 2288 105 0 0 chr2 37708500 37708794 -212979060 + AluSc SINE Alu 1 294 -15 2151 105 0 29 chr2 37708811 37709124 -212978730 + AluY SINE Alu 1 304 -7 274 286 0 12 chr2 37709127 37709211 -212978643 + L1MEd LINE L1 1032 1114 -5091 375 205 16 33 chr2 37709277 37709399 -212978455 + L1MEd LINE L1 1101 1220 -4997 230 274 81 81 chr2 37709482 37709741 -212978113 + L1MEd LINE L1 1496 1754 -4642 1935 162 13 0 chr2 37710065 37710367 -212977487 + AluJo SINE Alu 1 306 -6 360 303 0 32 chr2 37710367 37710497 -212977357 + L1MEd LINE L1 2228 2394 -3875 2367 71 3 3 chr2 37710497 37710793 -212977061 - AluY SINE Alu -15 296 1 1710 179 0 13 chr2 37710822 37711123 -212976731 + AluJb SINE Alu 1 297 -15 261 269 131 69 chr2 37711156 37711301 -212976553 - L2 LINE L2 -661 2653 2500 2377 74 0 3 chr2 37711589 37711885 -212975969 - AluY SINE Alu -16 295 1 2046 122 7 3 chr2 37712368 37712672 -212975182 - AluSx SINE Alu -7 305 1 629 225 31 84 chr2 37713332 37713559 -212974295 + L1ME3A LINE L1 5941 6155 -15 2365 107 0 0 chr2 37713578 37713888 -212973966 - AluSx SINE Alu 0 312 3 2174 124 3 0 chr2 37713899 37714206 -212973648 - AluSx SINE Alu -3 309 2 21 36 0 0 chr2 37714381 37714409 -212973445 + AT_rich Low_complexity Low_complexity 1 28 0 1427 182 0 85 chr2 37714685 37714821 -212973033 + AluJo SINE Alu 1 96 -216 2063 123 0 3 chr2 37714821 37715105 -212972749 - AluSx SINE Alu -29 283 1 1427 182 0 85 chr2 37715105 37715286 -212972568 + AluJo SINE Alu 96 291 -21 180 0 0 0 chr2 37715906 37715926 -212971928 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2284 117 0 16 chr2 37715953 37716270 -212971584 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 37716280 37716301 -212971553 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 37717134 37717178 -212970676 + AT_rich Low_complexity Low_complexity 1 44 0 704 136 7 100 chr2 37717223 37717322 -212970532 - FAM SINE Alu -158 163 79 1878 178 0 6 chr2 37717322 37717636 -212970218 + AluJb SINE Alu 1 312 0 704 136 7 100 chr2 37717636 37717676 -212970178 - FAM SINE Alu -242 79 37 2155 127 0 7 chr2 37718010 37718310 -212969544 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr2 37719658 37719679 -212968175 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr2 37721880 37721924 -212965930 + (CA)n Simple_repeat Simple_repeat 2 45 0 2017 127 23 0 chr2 37721984 37722104 -212965750 + AluSq SINE Alu 1 117 -196 441 0 0 0 chr2 37722104 37722153 -212965701 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 2017 127 23 0 chr2 37722153 37722331 -212965523 + AluSq SINE Alu 117 306 -7 1755 222 167 93 chr2 37722706 37723477 -212964377 + L2 LINE L2 2207 2919 -394 288 0 0 0 chr2 37723477 37723509 -212964345 + (TG)n Simple_repeat Simple_repeat 1 32 0 1755 222 167 93 chr2 37723509 37723527 -212964327 + L2 LINE L2 2919 2934 -379 1805 170 0 10 chr2 37723527 37723821 -212964033 - AluJo SINE Alu -21 291 1 1755 222 167 93 chr2 37723821 37724041 -212963813 + L2 LINE L2 2934 3311 -2 2439 85 0 0 chr2 37725315 37725621 -212962233 - AluSx SINE Alu -6 306 1 1339 149 27 5 chr2 37725788 37726009 -212961845 - MER46A DNA MER2_type 0 236 11 2014 123 14 0 chr2 37726085 37726370 -212961484 + AluSx SINE Alu 4 292 -20 1507 161 27 23 chr2 37726973 37727272 -212960582 + L1PA16 LINE L1 5867 6166 0 2002 129 3 0 chr2 37727576 37727862 -212959992 + AluSx SINE Alu 1 287 -25 365 109 0 0 chr2 37727862 37727917 -212959937 + Alu SINE Alu 238 292 -8 551 265 54 12 chr2 37729663 37729829 -212958025 - MER117 DNA MER1_type 0 197 25 2480 58 0 0 chr2 37729883 37730177 -212957677 + AluY SINE Alu 1 294 -17 238 291 136 78 chr2 37730244 37730450 -212957404 - L3 LINE CR1 -1127 450 233 2179 90 0 42 chr2 37730467 37730779 -212957075 + AluY SINE Alu 1 299 -12 2322 107 3 0 chr2 37731723 37732032 -212955822 + AluSp SINE Alu 1 310 -3 2348 72 7 7 chr2 37732283 37732574 -212955280 - AluY SINE Alu -20 291 1 1124 179 102 38 chr2 37732592 37732827 -212955027 - AluJo SINE Alu -61 251 2 33 25 0 0 chr2 37732939 37732979 -212954875 + AT_rich Low_complexity Low_complexity 1 40 0 323 269 129 59 chr2 37733408 37733594 -212954260 - MIR SINE MIR -56 206 8 267 241 9 27 chr2 37733708 37733820 -212954034 + GA-rich Low_complexity Low_complexity 2 111 0 261 139 0 0 chr2 37734698 37734741 -212953113 + (CCTA)n Simple_repeat Simple_repeat 2 44 0 1642 154 4 32 chr2 37734742 37735021 -212952833 - AluSx SINE Alu -30 282 12 22 0 0 0 chr2 37735115 37735137 -212952717 + AT_rich Low_complexity Low_complexity 1 22 0 2167 92 0 18 chr2 37735446 37735759 -212952095 + AluSc SINE Alu 1 308 0 2269 100 0 0 chr2 37736108 37736407 -212951447 + AluY SINE Alu 1 299 -12 22 56 0 0 chr2 37737637 37737673 -212950181 + AT_rich Low_complexity Low_complexity 1 36 0 253 299 142 22 chr2 37738170 37738304 -212949550 + MIR SINE MIR 20 169 -93 180 308 0 0 chr2 37738278 37738317 -212949537 + L2 LINE L2 3212 3250 -22 * 833 229 86 4 chr2 37738486 37738730 -212949124 - Charlie7 DNA MER1_type -353 2259 1996 570 279 88 7 chr2 37738736 37739008 -212948846 - Charlie7 DNA MER1_type -721 1891 1598 1817 149 3 7 chr2 37739384 37739666 -212948188 + AluSx SINE Alu 3 283 -29 309 26 0 0 chr2 37739666 37739704 -212948150 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 2342 97 3 0 chr2 37739807 37740106 -212947748 - AluSq SINE Alu -13 300 1 1324 74 42 23 chr2 37740788 37741003 -212946851 + L1MA2 LINE L1 6086 6304 0 1794 147 21 4 chr2 37741021 37741300 -212946554 + AluJb SINE Alu 3 286 -26 261 0 0 0 chr2 37741301 37741330 -212946524 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 24 0 0 0 chr2 37741335 37741359 -212946495 + AT_rich Low_complexity Low_complexity 1 24 0 2114 102 23 16 chr2 37741481 37741786 -212946068 + AluSx SINE Alu 1 307 -5 2096 118 3 3 chr2 37742108 37742404 -212945450 + AluSg SINE Alu 4 299 -11 291 241 176 9 chr2 37742404 37742512 -212945342 - MIR SINE MIR -18 244 119 215 245 0 0 chr2 37742810 37742863 -212944991 + A-rich Low_complexity Low_complexity 1 53 0 965 192 73 42 chr2 37743148 37743434 -212944420 + L1ME1 LINE L1 5767 6061 -105 1910 134 0 28 chr2 37743528 37743818 -212944036 + AluSx SINE Alu 1 282 -30 1172 125 0 11 chr2 37743839 37744015 -212943839 + AluSg/x SINE Alu 127 300 -10 821 240 27 14 chr2 37744220 37744441 -212943413 + L1MEc LINE L1 203 426 -6137 685 285 4 23 chr2 37744433 37744696 -212943158 + L1MEc LINE L1 1290 1547 -4837 * 1963 212 100 42 chr2 37744677 37744728 -212943126 + L1MEc LINE L1 1781 1828 -4735 2385 89 0 0 chr2 37744728 37745030 -212942824 + AluSq SINE Alu 1 302 -11 1963 212 100 42 chr2 37745030 37745638 -212942216 + L1MEc LINE L1 1828 2478 -4085 309 246 0 0 chr2 37746253 37746310 -212941544 + MER58B DNA MER1_type 1 57 -284 * 769 199 68 0 chr2 37746303 37746449 -212941405 + MER58B DNA MER1_type 182 337 -4 1030 299 180 67 chr2 37746496 37747768 -212940086 + L2 LINE L2 983 2580 -692 416 123 0 0 chr2 37747768 37747825 -212940029 + U6 snRNA snRNA 1 57 -50 1030 299 180 67 chr2 37747825 37748361 -212939493 + L2 LINE L2 2580 3054 -218 1690 168 10 27 chr2 37748827 37749125 -212938729 - AluJo SINE Alu -19 293 1 22 35 0 0 chr2 37749286 37749315 -212938539 + AT_rich Low_complexity Low_complexity 1 29 0 485 281 15 40 chr2 37749540 37749700 -212938154 + MIR3 SINE MIR 2 160 -66 2429 60 0 3 chr2 37749752 37750052 -212937802 + AluY SINE Alu 1 299 -12 387 41 0 0 chr2 37750062 37750111 -212937743 + (TA)n Simple_repeat Simple_repeat 1 49 0 183 114 0 0 chr2 37751882 37751917 -212935937 + (A)n Simple_repeat Simple_repeat 1 35 0 2021 137 10 16 chr2 37752077 37752391 -212935463 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 37753285 37753311 -212934543 + AT_rich Low_complexity Low_complexity 1 26 0 228 268 18 0 chr2 37753966 37754022 -212933832 - L2 LINE L2 -9 3263 3207 251 289 14 113 chr2 37754164 37754306 -212933548 - L2 LINE L2 -199 3073 2946 21 0 0 0 chr2 37754725 37754746 -212933108 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 37755055 37755086 -212932768 + AT_rich Low_complexity Low_complexity 1 31 0 2326 101 3 0 chr2 37755194 37755502 -212932352 + AluSp SINE Alu 1 309 -4 257 298 165 54 chr2 37755545 37755633 -212932221 + L2 LINE L2 1698 1775 -1539 2163 113 0 0 chr2 37755633 37755924 -212931930 + AluSc SINE Alu 2 292 -17 257 298 165 54 chr2 37755924 37756331 -212931523 + L2 LINE L2 1775 2248 -1066 238 333 156 52 chr2 37756418 37756706 -212931148 + L2 LINE L2 2432 2749 -565 863 232 170 35 chr2 37756708 37757049 -212930805 + L1MC4 LINE L1 7632 8018 -24 1581 220 0 0 chr2 37757074 37757379 -212930475 + AluJo SINE Alu 1 312 0 2217 97 17 0 chr2 37757704 37757993 -212929861 + AluSc SINE Alu 1 294 -15 2085 121 20 7 chr2 37758005 37758302 -212929552 + AluSx SINE Alu 1 301 -11 2506 70 0 0 chr2 37758912 37759211 -212928643 + AluY SINE Alu 1 299 -12 2258 105 3 0 chr2 37759612 37759916 -212927938 + AluSp SINE Alu 1 305 -8 2246 99 14 0 chr2 37760333 37760626 -212927228 + AluSx SINE Alu 2 298 -14 1792 167 0 7 chr2 37762062 37762362 -212925492 + AluJo SINE Alu 1 298 -14 705 164 31 23 chr2 37762384 37762512 -212925342 + FLAM_C SINE Alu 1 129 -4 399 311 155 10 chr2 37762518 37762827 -212925027 + L1MC/D LINE L1 5420 5773 -2035 231 313 0 0 chr2 37763138 37763205 -212924649 + A-rich Low_complexity Low_complexity 1 67 0 2167 119 0 0 chr2 37763207 37763500 -212924354 + AluSx SINE Alu 1 293 -19 2403 66 0 20 chr2 37763500 37763803 -212924051 + AluSg1 SINE Alu 1 297 -12 2263 102 0 3 chr2 37764225 37764520 -212923334 - AluSg SINE Alu -16 294 1 2359 104 0 0 chr2 37764987 37765284 -212922570 + AluSx SINE Alu 1 297 -15 994 163 47 0 chr2 37765306 37765478 -212922376 - MER5A DNA MER1_type -9 180 1 195 42 0 0 chr2 37765518 37765542 -212922312 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2042 128 16 10 chr2 37765588 37765892 -212921962 + AluSx SINE Alu 1 306 -6 308 163 0 0 chr2 37765929 37765972 -212921882 - Alu SINE Alu -257 43 1 366 269 161 8 chr2 37766364 37766494 -212921360 - L2 LINE L2 0 3272 3123 1720 154 33 0 chr2 37766658 37766957 -212920897 - AluJo SINE Alu 0 308 1 2280 95 7 0 chr2 37766997 37767292 -212920562 - AluSx SINE Alu -15 297 1 633 165 9 18 chr2 37767443 37767552 -212920302 - FRAM SINE Alu -16 160 53 243 0 0 0 chr2 37767897 37767924 -212919930 + (CA)n Simple_repeat Simple_repeat 2 28 0 1109 146 38 47 chr2 37768022 37768235 -212919619 - MER2 DNA MER2_type -134 211 1 810 162 128 7 chr2 37768472 37768620 -212919234 - AluJb SINE Alu -23 289 124 2101 103 10 10 chr2 37768665 37768966 -212918888 + AluY SINE Alu 1 301 -10 1726 164 0 4 chr2 37769632 37769901 -212917953 + AluSx SINE Alu 1 268 -44 26 0 0 0 chr2 37769935 37769961 -212917893 + AT_rich Low_complexity Low_complexity 1 26 0 196 290 87 0 chr2 37770410 37770479 -212917375 - L2 LINE L2 0 3313 3239 33 0 0 0 chr2 37770828 37770861 -212916993 + AT_rich Low_complexity Low_complexity 1 33 0 223 172 17 52 chr2 37771885 37771899 -212915955 + GA-rich Low_complexity Low_complexity 2 15 -42 2315 97 10 3 chr2 37771899 37772210 -212915644 + AluSp SINE Alu 1 313 0 223 172 17 52 chr2 37772210 37772224 -212915630 + GA-rich Low_complexity Low_complexity 15 28 -29 1609 210 0 16 chr2 37772224 37772538 -212915316 + AluJb SINE Alu 1 309 -3 223 172 17 52 chr2 37772538 37772566 -212915288 + GA-rich Low_complexity Low_complexity 28 57 0 2010 153 0 7 chr2 37772981 37773281 -212914573 + AluSx SINE Alu 1 298 -14 197 244 24 0 chr2 37773350 37773391 -212914463 + MIR SINE MIR 47 88 -174 1013 104 0 0 chr2 37773808 37773973 -212913881 - AluSc SINE Alu 0 313 149 661 51 0 0 chr2 37773988 37774067 -212913787 - AluY SINE Alu -230 80 2 258 139 0 0 chr2 37774329 37774372 -212913482 + L1M4 LINE L1 3903 3945 -2201 180 0 0 0 chr2 37774377 37774397 -212913457 + (TTA)n Simple_repeat Simple_repeat 2 21 0 817 163 0 0 chr2 37774397 37774520 -212913334 - FLAM_C SINE Alu -20 123 1 181 369 108 9 chr2 37774790 37774901 -212912953 - L2 LINE L2 0 3272 3151 303 235 142 0 chr2 37775263 37775359 -212912495 + L1MC4 LINE L1 7861 8031 -11 2243 98 0 31 chr2 37775383 37775700 -212912154 + AluY SINE Alu 1 307 -4 1654 177 0 14 chr2 37775708 37776002 -212911852 + AluJb SINE Alu 1 290 -22 250 229 90 23 chr2 37776075 37776196 -212911658 + L1ME LINE L1 5523 5655 -515 2144 110 3 13 chr2 37776391 37776690 -212911164 - AluSq SINE Alu -17 296 1 378 237 155 82 chr2 37776901 37777268 -212910586 + MLT1L LTR MaLR 220 613 -2 325 276 52 47 chr2 37777270 37777462 -212910392 - L1ME LINE L1 -356 5765 5573 2242 114 0 0 chr2 37777536 37777833 -212910021 - AluSx SINE Alu -15 297 1 25 31 0 0 chr2 37777833 37777865 -212909989 + AT_rich Low_complexity Low_complexity 1 32 0 183 42 0 0 chr2 37778224 37778248 -212909606 + (TA)n Simple_repeat Simple_repeat 1 24 0 214 221 104 0 chr2 37778252 37778329 -212909525 - MIR SINE MIR -2 260 176 2124 114 0 0 chr2 37778360 37778649 -212909205 + AluY SINE Alu 1 289 -22 2276 108 0 10 chr2 37778672 37778977 -212908877 + AluSq SINE Alu 1 302 -11 531 341 55 10 chr2 37779592 37779903 -212907951 + L1ME LINE L1 5338 5662 -500 2067 113 14 3 chr2 37780223 37780515 -212907339 + AluSg SINE Alu 1 295 -15 335 255 323 5 chr2 37780518 37780710 -212907144 + L1M4 LINE L1 3723 3975 -2171 2138 111 0 10 chr2 37781736 37782033 -212905821 - AluSc SINE Alu -15 294 1 235 49 49 0 chr2 37782384 37782425 -212905429 + (TA)n Simple_repeat Simple_repeat 1 43 0 322 298 105 24 chr2 37782494 37782618 -212905236 + MIR SINE MIR 18 151 -57 27 0 0 0 chr2 37782808 37782835 -212905019 + AT_rich Low_complexity Low_complexity 1 27 0 2436 84 7 0 chr2 37782927 37783237 -212904617 - AluSx SINE Alu 0 312 1 496 186 21 10 chr2 37783437 37783534 -212904320 + L2 LINE L2 3215 3312 -1 2011 168 6 50 chr2 37783810 37784174 -212903680 + MER7A DNA MER2_type 1 346 0 2367 83 0 0 chr2 37785046 37785335 -212902519 - AluSx SINE Alu -5 307 19 269 338 12 0 chr2 37785425 37785505 -212902349 + L2 LINE L2 3147 3227 -45 23 0 0 0 chr2 37785759 37785782 -212902072 + AT_rich Low_complexity Low_complexity 1 23 0 279 299 13 0 chr2 37786490 37786567 -212901287 - L2 LINE L2 0 3313 3236 1541 173 4 0 chr2 37786626 37786880 -212900974 + MER1B DNA MER1_type 4 258 -81 183 80 0 0 chr2 37786882 37786907 -212900947 + (CA)n Simple_repeat Simple_repeat 2 26 0 187 301 161 21 chr2 37787165 37787258 -212900596 - L2 LINE L2 -209 3063 2958 538 265 43 6 chr2 37787363 37787525 -212900329 + MIR SINE MIR 95 262 0 2457 80 0 0 chr2 37788240 37788539 -212899315 - AluY SINE Alu -12 299 1 922 197 0 28 chr2 37788689 37788867 -212898987 + FAM SINE Alu 3 175 0 2068 162 0 3 chr2 37789066 37789375 -212898479 + AluSx SINE Alu 1 308 -4 2086 122 0 23 chr2 37789473 37789776 -212898078 - AluSq SINE Alu -17 296 1 318 341 77 35 chr2 37790020 37790190 -212897664 + MIR3 SINE MIR 17 193 -15 234 212 12 59 chr2 37790366 37790451 -212897403 + CT-rich Low_complexity Low_complexity 5 85 0 2066 148 51 26 chr2 37790594 37790946 -212896908 - MER46B DNA MER2_type 0 236 1 231 263 126 0 chr2 37791122 37791217 -212896637 - MIR SINE MIR -56 206 100 2006 129 13 10 chr2 37792142 37792444 -212895410 + AluSx SINE Alu 3 305 -7 1302 87 29 0 chr2 37792582 37792755 -212895099 - AluSq SINE Alu -2 311 134 2365 94 7 0 chr2 37792755 37793054 -212894800 - AluSx SINE Alu -8 304 4 401 265 84 96 chr2 37793108 37793676 -212894178 + L1MEd LINE L1 713 1312 -4929 2214 92 14 0 chr2 37793676 37793970 -212893884 + AluY SINE Alu 1 298 -13 401 265 84 96 chr2 37793970 37794038 -212893816 + L1MEd LINE L1 1312 1379 -4862 378 197 28 0 chr2 37794199 37794270 -212893584 + U6 snRNA snRNA 1 73 -34 652 188 109 30 chr2 37794630 37794795 -212893059 - MER5B DNA MER1_type 0 178 1 385 188 150 53 chr2 37795362 37795495 -212892359 - MIR SINE MIR -12 250 105 1235 166 0 5 chr2 37795719 37795950 -212891904 - AluJb SINE Alu 0 315 86 1808 103 64 67 chr2 37795953 37796265 -212891589 - AluJb SINE Alu -1 311 1 1356 248 152 42 chr2 37796267 37797032 -212890822 + L2 LINE L2 2443 3308 -5 2081 93 65 4 chr2 37797366 37797645 -212890209 - AluSc SINE Alu -13 296 1 1888 117 3 96 chr2 37798513 37798847 -212889007 + AluSx SINE Alu 1 303 -9 734 233 146 31 chr2 37799475 37799763 -212888091 + L2 LINE L2 2988 3308 -5 358 326 8 0 chr2 37799763 37799892 -212887962 - MIR3 SINE MIR -71 137 8 214 125 21 21 chr2 37801173 37801221 -212886633 + (CCG)n Simple_repeat Simple_repeat 2 49 0 24 53 0 0 chr2 37801516 37801554 -212886300 + GC_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 37801586 37801614 -212886240 + GC_rich Low_complexity Low_complexity 1 28 0 270 0 0 0 chr2 37801736 37801766 -212886088 + (CA)n Simple_repeat Simple_repeat 2 31 0 203 329 73 0 chr2 37803019 37803101 -212884753 - MIR3 SINE MIR -26 182 95 573 103 0 0 chr2 37803290 37803368 -212884486 + AluJ/FLAM SINE Alu 2 79 -233 2646 97 10 79 chr2 37803376 37803779 -212884075 + MER51B LTR ERV1 2 376 -1 1540 127 5 0 chr2 37803779 37803999 -212883855 + AluSg/x SINE Alu 74 294 -16 1117 128 6 23 chr2 37804091 37804263 -212883591 + AluSx SINE Alu 3 171 -141 275 294 59 15 chr2 37804263 37804399 -212883455 + MIR SINE MIR 121 262 0 193 279 73 0 chr2 37804413 37804481 -212883373 + MIR SINE MIR 180 252 -10 2266 97 0 3 chr2 37804553 37804851 -212883003 + AluSg SINE Alu 1 297 -13 2138 113 0 13 chr2 37804853 37805162 -212882692 + AluSq SINE Alu 1 305 -8 2468 66 0 10 chr2 37805407 37805708 -212882146 - AluSc SINE Alu -11 298 1 2075 96 10 7 chr2 37805708 37806000 -212881854 - AluSc SINE Alu -15 294 1 1861 129 7 4 chr2 37806101 37806381 -212881473 + AluSx SINE Alu 2 282 -30 258 105 0 0 chr2 37806381 37806419 -212881435 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 275 159 95 0 chr2 37806463 37806526 -212881328 - L1MB8 LINE L1 -245 5933 5865 1907 159 0 7 chr2 37806526 37806834 -212881020 - AluSx SINE Alu -6 306 1 28 61 0 0 chr2 37807408 37807457 -212880397 + AT_rich Low_complexity Low_complexity 1 49 0 180 408 70 13 chr2 37808628 37808785 -212879069 - L2 LINE L2 -262 3010 2845 2177 112 14 0 chr2 37808800 37809094 -212878760 - AluSx SINE Alu -14 298 1 2369 48 0 27 chr2 37809140 37809432 -212878422 - AluY SINE Alu -27 284 1 225 0 0 0 chr2 37809439 37809464 -212878390 + (TA)n Simple_repeat Simple_repeat 2 26 0 226 227 0 72 chr2 37809464 37809561 -212878293 - L1MC4 LINE L1 -1339 6703 6614 328 258 22 22 chr2 37809578 37809667 -212878187 - L1MC4 LINE L1 -1340 6702 6614 328 311 0 0 chr2 37809591 37809681 -212878173 + L1MC4 LINE L1 6614 6703 -1339 1500 128 145 0 chr2 37809823 37810090 -212877764 + AluSx SINE Alu 9 310 0 903 185 11 28 chr2 37810141 37810319 -212877535 + AluJb SINE Alu 16 190 -122 809 222 6 0 chr2 37810319 37810481 -212877373 + AluJo/FRAM SINE Alu 137 299 -3 182 226 0 0 chr2 37810847 37810878 -212876976 + L2 LINE L2 3210 3240 -32 598 214 0 0 chr2 37810948 37811092 -212876762 - AluJo SINE Alu 0 316 173 617 178 0 0 chr2 37811093 37811200 -212876654 - AluJo SINE Alu -205 107 1 296 349 48 0 chr2 37811402 37811485 -212876369 - MIR SINE MIR -57 151 65 2372 69 0 13 chr2 37811552 37811856 -212875998 + AluY SINE Alu 3 302 -9 2270 93 7 0 chr2 37811869 37812159 -212875695 + AluSx SINE Alu 7 298 -14 774 211 7 7 chr2 37812164 37812316 -212875538 + FRAM SINE Alu 1 152 -14 2503 83 3 0 chr2 37812619 37812931 -212874923 + AluSp SINE Alu 1 313 0 202 182 0 0 chr2 37812979 37813012 -212874842 + polypurine Low_complexity Low_complexity 3 35 0 246 90 3 0 chr2 37813177 37813215 -212874639 + L1MB8 LINE L1 5573 5611 -567 2191 132 51 57 chr2 37813263 37813521 -212874333 + L1MB8 LINE L1 5619 5877 -301 1929 116 67 0 chr2 37813521 37813805 -212874049 + AluSx SINE Alu 1 303 -9 2191 132 51 57 chr2 37813805 37813819 -212874035 + L1MB8 LINE L1 5877 5890 -288 1971 143 0 3 chr2 37813819 37814113 -212873741 + AluJb SINE Alu 11 303 -9 2191 132 51 57 chr2 37814113 37814348 -212873506 + L1MB8 LINE L1 5890 6124 -54 1378 162 81 13 chr2 37814348 37814583 -212873271 - AluJo SINE Alu -57 255 5 776 183 14 14 chr2 37814704 37814846 -212873008 + AluJb SINE Alu 137 278 -34 225 0 0 0 chr2 37814849 37814874 -212872980 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 2234 97 16 7 chr2 37814883 37815192 -212872662 + AluSx SINE Alu 1 312 0 447 165 110 0 chr2 37815262 37815353 -212872501 + FRAM SINE Alu 73 173 -3 376 287 0 70 chr2 37815480 37815623 -212872231 + L2 LINE L2 3176 3308 -5 453 50 0 0 chr2 37817689 37817749 -212870105 + (CA)n Simple_repeat Simple_repeat 2 61 0 538 208 28 56 chr2 37817766 37817910 -212869944 + L2 LINE L2 3173 3312 -1 2172 72 7 41 chr2 37818089 37818403 -212869451 + AluSp SINE Alu 6 309 0 1207 108 0 12 chr2 37818408 37818575 -212869279 + AluSg/x SINE Alu 126 290 -20 25 0 0 0 chr2 37818623 37818648 -212869206 + AT_rich Low_complexity Low_complexity 1 25 0 2458 74 0 3 chr2 37818754 37819053 -212868801 + AluSq SINE Alu 1 298 -15 207 0 0 0 chr2 37819053 37819076 -212868778 + (TA)n Simple_repeat Simple_repeat 1 23 0 2164 114 0 29 chr2 37820286 37820602 -212867252 - AluSg SINE Alu -3 307 1 189 309 107 0 chr2 37820941 37821025 -212866829 - L2 LINE L2 -54 3259 3167 2214 114 3 0 chr2 37821457 37821754 -212866100 - AluSx SINE Alu -14 298 1 1012 128 0 0 chr2 37821757 37821890 -212865964 - AluSq/x SINE Alu -180 133 1 234 229 71 0 chr2 37821891 37821961 -212865893 + L1ME LINE L1 5589 5663 -458 1981 142 28 0 chr2 37821984 37822273 -212865581 + AluSx SINE Alu 1 297 -15 1860 158 7 10 chr2 37822628 37822925 -212864929 + AluJb SINE Alu 5 300 -12 2129 122 3 7 chr2 37823095 37823398 -212864456 - AluSc SINE Alu -6 303 2 2374 94 0 0 chr2 37823924 37824221 -212863633 - AluSc SINE Alu -12 297 1 185 91 0 30 chr2 37824523 37824556 -212863298 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 208 304 22 33 chr2 37824639 37824731 -212863123 - MER5A DNA MER1_type -28 161 71 2101 97 47 17 chr2 37824732 37825032 -212862822 - AluSg SINE Alu -1 309 1 890 128 0 28 chr2 37825686 37825827 -212862027 - FLAM_C SINE Alu -6 137 1 22 56 0 0 chr2 37825963 37825999 -212861855 + AT_rich Low_complexity Low_complexity 1 36 0 1804 107 118 11 chr2 37826082 37826352 -212861502 + AluSg SINE Alu 1 299 -11 1607 132 119 4 chr2 37826785 37827063 -212860791 + AluSg1 SINE Alu 1 307 0 1889 172 0 0 chr2 37827146 37827442 -212860412 + AluJb SINE Alu 11 306 -6 39 38 0 0 chr2 37827533 37827586 -212860268 + AT_rich Low_complexity Low_complexity 1 53 0 1427 192 4 4 chr2 37827607 37827862 -212859992 - AluJo SINE Alu -57 255 1 496 215 75 21 chr2 37827902 37828070 -212859784 + L1MC4a LINE L1 6701 6908 -877 2018 133 0 35 chr2 37828087 37828403 -212859451 + AluSx SINE Alu 1 305 -7 1841 212 146 55 chr2 37828429 37829137 -212858717 + L1MC4 LINE L1 7270 8041 -1 25 0 0 0 chr2 37829558 37829583 -212858271 + AT_rich Low_complexity Low_complexity 1 25 0 2372 83 3 0 chr2 37829587 37829887 -212857967 - AluY SINE Alu -10 301 1 2074 125 20 3 chr2 37829925 37830220 -212857634 - AluSg SINE Alu -10 300 1 1020 160 0 0 chr2 37830734 37830890 -212856964 - AluJb SINE Alu -23 289 134 2201 101 7 3 chr2 37830899 37831196 -212856658 - AluSg SINE Alu -12 298 1 1697 137 54 73 chr2 37831254 37831439 -212856415 - AluSq SINE Alu -4 309 131 2295 86 3 3 chr2 37831439 37831729 -212856125 - AluSp SINE Alu -23 290 1 1697 137 54 73 chr2 37831729 37831858 -212855996 - AluSq SINE Alu -182 131 1 1777 183 0 13 chr2 37832016 37832322 -212855532 - AluJb SINE Alu -6 306 5 2387 71 0 0 chr2 37832402 37832698 -212855156 - AluY SINE Alu -10 301 6 540 309 77 22 chr2 37833120 37833486 -212854368 + L1MC/D LINE L1 5372 5757 -2051 25 0 0 0 chr2 37833674 37833699 -212854155 + AT_rich Low_complexity Low_complexity 1 25 0 2311 85 0 20 chr2 37833770 37834076 -212853778 + AluSg SINE Alu 1 300 -10 2009 142 0 3 chr2 37834233 37834528 -212853326 + AluSx SINE Alu 1 294 -18 2150 134 0 3 chr2 37834568 37834875 -212852979 + AluSg SINE Alu 1 306 -4 2064 108 7 30 chr2 37834916 37835213 -212852641 - AluSx SINE Alu -22 290 1 422 328 124 21 chr2 37836118 37836359 -212851495 - L3 LINE CR1 -5 1572 1307 766 112 0 9 chr2 37836360 37836476 -212851378 + MER30B DNA MER1_type 1 115 -75 2174 110 13 10 chr2 37836495 37836804 -212851050 - AluSx SINE Alu -2 310 1 309 162 73 0 chr2 37837673 37837741 -212850113 - MER116 DNA Mariner 0 80 8 1781 154 19 26 chr2 37837814 37838126 -212849728 + AluSx SINE Alu 1 310 -2 922 206 12 0 chr2 37838126 37838291 -212849563 + AluJo/FRAM SINE Alu 134 300 -12 627 340 65 30 chr2 37839708 37840183 -212847671 + L2 LINE L2 2595 3085 -228 2262 101 19 0 chr2 37841202 37841509 -212846345 + AluSp SINE Alu 1 313 0 2130 104 34 3 chr2 37842175 37842472 -212845382 - AluSx SINE Alu -6 306 1 2430 94 0 0 chr2 37843815 37844124 -212843730 + AluSc SINE Alu 1 309 0 1961 129 24 14 chr2 37844139 37844433 -212843421 + AluJo SINE Alu 4 300 -12 1829 126 0 4 chr2 37845357 37845618 -212842236 - AluSx SINE Alu -19 293 34 181 336 39 94 chr2 37845675 37845803 -212842051 - L2 LINE L2 -3 3269 3149 233 275 87 0 chr2 37845915 37845984 -212841870 + L2 LINE L2 3198 3272 0 24 0 0 0 chr2 37846293 37846317 -212841537 + AT_rich Low_complexity Low_complexity 1 24 0 559 270 14 19 chr2 37846632 37846843 -212841011 - L1ME LINE L1 -391 5730 5521 315 276 51 10 chr2 37847107 37847205 -212840649 - L1ME LINE L1 -373 5748 5647 2308 85 3 3 chr2 37847232 37847527 -212840327 - AluSq SINE Alu -18 295 1 200 355 95 71 chr2 37847610 37847906 -212839948 + L2 LINE L2 2966 3268 -4 313 279 25 0 chr2 37847980 37848059 -212839795 + Tigger7 DNA MER2_type 1 81 -258 721 203 0 0 chr2 37848241 37848374 -212839480 + FLAM_A SINE Alu 1 133 0 2198 98 0 3 chr2 37849013 37849299 -212838555 - AluY SINE Alu -26 285 1 2161 94 27 20 chr2 37849534 37849833 -212838021 + AluSc SINE Alu 1 301 -8 414 354 70 74 chr2 37849986 37850906 -212836948 - L2 LINE L2 -419 2895 1980 2329 96 3 0 chr2 37850947 37851248 -212836606 - AluY SINE Alu -9 302 1 601 250 64 67 chr2 37851249 37851577 -212836277 - MER46C DNA MER2_type 0 338 12 21 0 0 0 chr2 37851657 37851678 -212836176 + AT_rich Low_complexity Low_complexity 1 21 0 1695 109 4 35 chr2 37851983 37852240 -212835614 + AluSx SINE Alu 44 292 -20 2336 94 0 7 chr2 37852243 37852551 -212835303 + AluSq SINE Alu 4 309 -4 2055 121 7 7 chr2 37853717 37854015 -212833839 + AluSg SINE Alu 1 298 -12 1707 179 0 0 chr2 37854283 37854557 -212833297 - AluJb SINE Alu -1 311 38 2204 124 0 3 chr2 37854735 37855042 -212832812 - AluSx SINE Alu -6 306 1 271 189 0 0 chr2 37855964 37856017 -212831837 - MER58 DNA MER1_type -1 2419 2367 367 181 53 21 chr2 37856019 37856113 -212831741 + LTR34 LTR ERV1 3 99 -565 821 217 78 90 chr2 37856203 37856444 -212831410 + LTR34 LTR ERV1 136 378 -321 2075 127 7 0 chr2 37856444 37856743 -212831111 + AluJb SINE Alu 1 301 -11 821 217 78 90 chr2 37856743 37856987 -212830867 + LTR34 LTR ERV1 378 695 -4 2222 110 0 7 chr2 37857012 37857312 -212830542 - AluSg SINE Alu -10 300 3 829 230 12 0 chr2 37857315 37857480 -212830374 - MER58A DNA MER1_type 0 168 2 1464 233 34 26 chr2 37857570 37858098 -212829756 + L1MEc LINE L1 628 1159 -5237 1918 148 3 28 chr2 37858324 37858642 -212829212 + AluSx SINE Alu 1 310 -2 3042 156 52 0 chr2 37858767 37859365 -212828489 + L1MA8 LINE L1 5660 6288 -3 186 43 0 0 chr2 37860690 37860713 -212827141 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2246 175 42 28 chr2 37860760 37861257 -212826597 + MLT1D LTR MaLR 1 504 -1 391 354 66 55 chr2 37861269 37861543 -212826311 + L2 LINE L2 2990 3266 -6 2085 103 3 20 chr2 37861649 37861941 -212825913 - AluSx SINE Alu -25 287 1 196 247 78 91 chr2 37862124 37862201 -212825653 + MIR3 SINE MIR 101 176 -32 36 23 0 0 chr2 37863065 37863108 -212824746 + AT_rich Low_complexity Low_complexity 1 43 0 217 188 21 0 chr2 37863420 37863468 -212824386 + (TA)n Simple_repeat Simple_repeat 1 49 0 2223 93 0 0 chr2 37864219 37864497 -212823357 + AluSq SINE Alu 1 278 -35 1901 127 18 0 chr2 37864498 37864813 -212823041 + AluSg SINE Alu 3 322 0 251 260 0 0 chr2 37865176 37865253 -212822601 - L1ME LINE L1 -237 5884 5808 527 317 42 15 chr2 37865335 37865597 -212822257 - L1ME LINE L1 -469 5652 5384 2173 206 124 0 chr2 37865640 37866139 -212821715 + MER68 LTR ERV1 2 562 0 30 83 0 0 chr2 37866163 37866235 -212821619 + AT_rich Low_complexity Low_complexity 1 72 0 643 122 37 19 chr2 37866263 37866370 -212821484 - FLAM_A SINE Alu 0 142 34 195 100 0 0 chr2 37867088 37867118 -212820736 + (CTTA)n Simple_repeat Simple_repeat 2 31 0 814 231 0 0 chr2 37867121 37867268 -212820586 - FRAM SINE Alu -30 146 1 189 107 0 0 chr2 37867683 37867711 -212820143 + (TA)n Simple_repeat Simple_repeat 2 29 0 2286 92 7 0 chr2 37867712 37868016 -212819838 - AluSq SINE Alu -7 306 1 752 253 116 0 chr2 37868493 37868726 -212819128 + MIR SINE MIR 2 261 -1 1628 58 0 0 chr2 37868952 37869143 -212818711 - AluY SINE Alu -120 191 1 530 157 49 20 chr2 37869144 37869169 -212818685 - AluJb SINE Alu -16 296 273 2848 7 0 0 chr2 37869169 37869477 -212818377 + AluYa5 SINE Alu 1 308 -3 530 157 49 20 chr2 37869477 37869553 -212818301 - AluJb SINE Alu -39 273 192 900 169 0 0 chr2 37869553 37869695 -212818159 - AluJo SINE Alu -170 142 1 266 363 18 26 chr2 37869802 37869915 -212817939 + MIR SINE MIR 93 204 -58 227 247 12 24 chr2 37870059 37870144 -212817710 + HsTC2 DNA Tc2 14 97 -1801 680 254 90 25 chr2 37870144 37870423 -212817431 - L1ME LINE L1 -1234 4912 4616 848 314 146 57 chr2 37870436 37871354 -212816500 + L2 LINE L2 2008 3048 -224 2211 115 0 0 chr2 37871354 37871649 -212816205 - AluSq SINE Alu -18 295 1 848 314 146 57 chr2 37871649 37871896 -212815958 + L2 LINE L2 3048 3272 0 2267 84 3 0 chr2 37871996 37872280 -212815574 - AluSg SINE Alu -25 285 1 1287 126 54 9 chr2 37872407 37872629 -212815225 + L1MA3 LINE L1 6067 6298 -7 27 0 0 0 chr2 37872879 37872906 -212814948 + AT_rich Low_complexity Low_complexity 1 27 0 2354 96 0 0 chr2 37872975 37873277 -212814577 - AluSx SINE Alu -10 302 1 734 93 9 7 chr2 37873521 37873737 -212814117 + AluSx SINE Alu 22 280 -30 800 129 0 50 chr2 37873876 37874016 -212813838 + FLAM_C SINE Alu 1 133 0 2143 94 42 3 chr2 37874022 37874308 -212813546 + AluSg SINE Alu 1 297 -13 349 304 93 19 chr2 37874320 37874481 -212813373 + MIR SINE MIR 41 213 -49 212 307 29 7 chr2 37874627 37874716 -212813138 + MIR SINE MIR 45 133 -75 235 290 50 60 chr2 37874971 37875071 -212812783 + MIR SINE MIR 164 262 0 1707 171 7 0 chr2 37876302 37876615 -212811239 + AluJb SINE Alu 1 315 0 25 31 0 0 chr2 37876722 37876754 -212811100 + AT_rich Low_complexity Low_complexity 1 32 0 287 158 72 0 chr2 37877002 37877071 -212810783 - L1ME1 LINE L1 -34 6130 6058 428 183 0 19 chr2 37877077 37877098 -212810756 - MER33 DNA MER1_type -2261 324 304 7807 126 35 19 chr2 37877098 37877447 -212810407 + HSMAR2 DNA Mariner 1 343 -959 2233 112 7 0 chr2 37877447 37877750 -212810104 + AluSx SINE Alu 1 305 -7 7807 126 35 19 chr2 37877750 37878677 -212809177 + HSMAR2 DNA Mariner 343 1298 -4 428 183 0 19 chr2 37878677 37878759 -212809095 - MER33 DNA MER1_type -2281 304 223 329 216 68 14 chr2 37878758 37878832 -212809022 - AluSq/x SINE Alu -177 125 48 * 1160 155 32 5 chr2 37878830 37879090 -212808764 - MER33 DNA MER1_type -89 235 1 2083 215 43 8 chr2 37879091 37879579 -212808275 - L1ME1 LINE L1 -143 6023 5519 354 252 44 57 chr2 37879588 37879747 -212808107 - L1MDb LINE L1 -5001 1428 1115 3125 232 85 16 chr2 37879819 37880810 -212807044 - L1MDb LINE L1 -5283 1324 266 2307 109 0 0 chr2 37881194 37881496 -212806358 + AluSq SINE Alu 1 302 -11 2022 122 48 0 chr2 37881605 37881900 -212805954 + AluSx SINE Alu 1 309 -3 748 199 0 0 chr2 37881900 37882031 -212805823 + FLAM_A SINE Alu 1 131 -2 236 229 92 42 chr2 37882084 37882209 -212805645 + MIR SINE MIR 74 205 -57 429 224 46 33 chr2 37882694 37882846 -212805008 - MER104 DNA Tc2 0 180 27 1887 172 0 0 chr2 37883026 37883322 -212804532 - AluJb SINE Alu -16 296 1 23 0 0 0 chr2 37883460 37883483 -212804371 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 37884688 37884708 -212803146 + (A)n Simple_repeat Simple_repeat 1 20 0 1729 164 0 7 chr2 37884736 37885011 -212802843 - AluJo SINE Alu -20 292 20 1914 129 3 26 chr2 37885596 37885899 -212801955 + AluSc SINE Alu 1 296 -13 2465 89 0 0 chr2 37885913 37886216 -212801638 + AluSc SINE Alu 1 303 -6 2411 97 0 0 chr2 37886566 37886877 -212800977 - AluSx SINE Alu -1 311 1 3975 181 15 24 chr2 37887103 37887843 -212800011 - MER44D DNA MER2_type 0 605 1 181 265 82 0 chr2 37888706 37888755 -212799099 + L2 LINE L2 3209 3261 -11 25 65 0 0 chr2 37888957 37889003 -212798851 + AT_rich Low_complexity Low_complexity 1 46 0 2331 64 48 0 chr2 37889022 37889317 -212798537 - AluSp SINE Alu -3 310 2 2223 106 7 0 chr2 37889318 37889620 -212798234 - AluSq SINE Alu -9 304 1 207 202 12 60 chr2 37890077 37890161 -212797693 + (TTTA)n Simple_repeat Simple_repeat 4 83 0 355 319 67 7 chr2 37890206 37890341 -212797513 + MIR3 SINE MIR 48 190 -18 780 181 0 8 chr2 37890468 37890601 -212797253 - FLAM_C SINE Alu -11 132 1 225 65 0 0 chr2 37891846 37891877 -212795977 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 618 191 18 0 chr2 37892569 37892679 -212795175 + FLAM_A SINE Alu 3 114 -19 24 67 0 0 chr2 37892704 37892749 -212795105 + AT_rich Low_complexity Low_complexity 1 45 0 566 311 70 25 chr2 37892913 37893154 -212794700 + MIR SINE MIR 8 259 -3 22 0 0 0 chr2 37893672 37893694 -212794160 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 37893875 37893905 -212793949 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 37894189 37894218 -212793636 + AT_rich Low_complexity Low_complexity 1 29 0 381 43 0 0 chr2 37894231 37894238 -212793616 + (TG)n Simple_repeat Simple_repeat 1 54 0 381 43 0 0 chr2 37894238 37894285 -212793569 + (TG)n Simple_repeat Simple_repeat 2 48 0 2139 115 20 0 chr2 37894302 37894597 -212793257 - AluSx SINE Alu -11 301 1 300 333 137 24 chr2 37895148 37895316 -212792538 + MIR3 SINE MIR 21 207 -1 217 228 35 0 chr2 37895942 37895999 -212791855 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 2119 117 0 10 chr2 37896982 37897281 -212790573 + AluSx SINE Alu 1 296 -16 353 268 268 0 chr2 37897370 37897527 -212790327 + MIR SINE MIR 2 200 -62 1643 176 3 42 chr2 37897628 37897935 -212789919 - AluJo SINE Alu -15 297 3 267 194 60 0 chr2 37898004 37898071 -212789783 - MIR SINE MIR 0 262 192 2257 117 0 7 chr2 37898644 37898951 -212788903 - AluSx SINE Alu -7 305 1 1093 153 67 24 chr2 37899117 37899326 -212788528 - AluJo SINE Alu -9 303 86 1880 144 39 0 chr2 37900162 37900446 -212787408 - AluSx SINE Alu -17 295 1 755 292 49 21 chr2 37901016 37901259 -212786595 + MIR SINE MIR 13 262 0 1931 152 0 14 chr2 37901714 37902011 -212785843 - AluSx SINE Alu -19 293 1 271 387 0 19 chr2 37902073 37902179 -212785675 + L2 LINE L2 3150 3253 -19 2089 137 0 9 chr2 37902324 37902639 -212785215 + AluSx SINE Alu 1 312 0 193 307 148 0 chr2 37902911 37903012 -212784842 + L2 LINE L2 3190 3305 -8 22 0 0 0 chr2 37904552 37904574 -212783280 + AT_rich Low_complexity Low_complexity 1 22 0 2252 104 0 7 chr2 37904738 37905037 -212782817 - AluSx SINE Alu -15 297 1 541 280 109 33 chr2 37905746 37905957 -212781897 + MIR SINE MIR 15 241 -21 192 245 19 38 chr2 37905923 37905968 -212781886 + L2 LINE L2 3253 3298 -15 * 306 0 0 0 chr2 37905968 37906002 -212781852 + (CAT)n Simple_repeat Simple_repeat 1 34 0 240 363 108 0 chr2 37906019 37906121 -212781733 - MIR SINE MIR -69 139 27 2268 98 0 10 chr2 37906514 37906821 -212781033 - AluSg SINE Alu -6 304 1 806 220 78 5 chr2 37907156 37907347 -212780507 + L1ME1 LINE L1 37 241 -6155 * 2697 240 75 7 chr2 37907344 37908220 -212779634 + L1ME1 LINE L1 3059 3994 -2221 1267 106 0 0 chr2 37908220 37908381 -212779473 - AluSx SINE Alu -151 161 1 279 247 25 0 chr2 37908382 37908463 -212779391 - L1MD2 LINE L1 -145 6214 6132 * 3017 200 62 39 chr2 37908446 37908877 -212778977 + L1ME1 LINE L1 4510 4930 -1305 2471 60 3 7 chr2 37908877 37909179 -212778675 + AluY SINE Alu 1 301 -10 3017 200 62 39 chr2 37909179 37910232 -212777622 + L1ME1 LINE L1 4930 6031 -204 23 33 0 0 chr2 37910231 37910261 -212777593 + AT_rich Low_complexity Low_complexity 1 30 0 * 253 190 350 30 chr2 37911018 37911118 -212776736 + L2 LINE L2 3182 3313 0 1120 216 41 25 chr2 37911150 37911469 -212776385 + MLT1C LTR MaLR 144 467 0 2149 109 3 17 chr2 37912143 37912445 -212775409 - AluSx SINE Alu -14 298 1 261 276 23 46 chr2 37912859 37912946 -212774908 + MIR SINE MIR 3 87 -175 200 378 0 31 chr2 37913052 37913150 -212774704 - MIR SINE MIR -148 114 20 349 323 126 19 chr2 37913572 37913835 -212774019 + L2 LINE L2 2109 2399 -915 2063 284 163 14 chr2 37914806 37915731 -212772123 - L2 LINE L2 -234 3079 2004 305 310 92 14 chr2 37915885 37916027 -212771827 - L2 LINE L2 -1341 1973 1821 953 43 0 0 chr2 37916064 37916181 -212771673 - L1PA5 LINE L1 -6 6148 6032 1219 261 160 32 chr2 37916327 37916894 -212770960 + HAL1 LINE L1 220 876 -1631 2219 105 0 31 chr2 37916894 37917217 -212770637 - AluSq SINE Alu 0 313 1 1219 261 160 32 chr2 37917217 37917273 -212770581 + HAL1 LINE L1 876 923 -1584 2814 96 76 5 chr2 37917284 37917730 -212770124 + MER9 LTR ERVK 34 511 0 581 275 18 42 chr2 37917817 37917984 -212769870 - L2 LINE L2 -2047 1267 1105 781 207 130 49 chr2 37919638 37919923 -212767931 + L2 LINE L2 2305 2612 -702 220 321 107 9 chr2 37920106 37920218 -212767636 + MIR SINE MIR 81 203 -59 1928 230 49 28 chr2 37920530 37921059 -212766795 - MLT1F LTR MaLR -2 593 1 2204 122 0 13 chr2 37921350 37921654 -212766200 + AluSx SINE Alu 1 300 -12 243 267 35 0 chr2 37921692 37921778 -212766076 - MLT1K LTR MaLR 0 588 500 303 276 41 16 chr2 37921836 37921959 -212765895 - MLT1K LTR MaLR -186 402 277 407 267 230 7 chr2 37922215 37922350 -212765504 + MER5A DNA MER1_type 24 188 -1 356 312 206 41 chr2 37922712 37923148 -212764706 - L2 LINE L2 -568 2746 2239 1791 155 0 21 chr2 37923343 37923659 -212764195 - AluJo SINE Alu 0 310 1 2373 105 0 0 chr2 37924122 37924435 -212763419 + AluSq SINE Alu 1 313 0 1283 160 0 63 chr2 37925837 37925880 -212761974 + AluJo SINE Alu 37 81 -231 2428 87 3 0 chr2 37925880 37926180 -212761674 + AluSp SINE Alu 1 301 -12 1283 160 0 63 chr2 37926180 37926373 -212761481 + AluJo SINE Alu 81 258 -54 23 0 0 0 chr2 37926377 37926400 -212761454 + AT_rich Low_complexity Low_complexity 1 23 0 607 106 34 28 chr2 37927162 37927341 -212760513 + (TA)n Simple_repeat Simple_repeat 1 180 0 1873 178 0 0 chr2 37927701 37927993 -212759861 + AluJo SINE Alu 1 292 -20 869 160 0 0 chr2 37928050 37928181 -212759673 + FLAM_C SINE Alu 1 131 -12 2288 101 0 0 chr2 37928504 37928792 -212759062 - AluSc SINE Alu -21 288 1 233 216 0 0 chr2 37928961 37929012 -212758842 + GA-rich Low_complexity Low_complexity 1 51 0 1060 204 38 5 chr2 37929058 37929269 -212758585 - MER20 DNA MER1_type -1 218 1 1948 148 13 10 chr2 37929497 37929801 -212758053 + AluSx SINE Alu 1 305 -7 593 313 70 14 chr2 37931939 37932153 -212755701 - L3 LINE CR1 -11 1566 1341 230 246 15 31 chr2 37932160 37932225 -212755629 - L3 LINE CR1 -941 636 573 445 219 163 0 chr2 37932606 37932729 -212755125 - MER5B DNA MER1_type -34 144 2 27 49 0 0 chr2 37932837 37932878 -212754976 + AT_rich Low_complexity Low_complexity 1 41 0 2182 130 0 0 chr2 37932878 37933171 -212754683 + AluSx SINE Alu 1 293 -19 282 56 0 0 chr2 37933172 37933208 -212754646 + (TA)n Simple_repeat Simple_repeat 1 36 0 198 0 0 0 chr2 37933207 37933229 -212754625 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 721 179 15 22 chr2 37933603 37933737 -212754117 + FLAM_A SINE Alu 1 133 0 2585 140 110 10 chr2 37934460 37934980 -212752874 + L1MB8 LINE L1 5607 6178 0 757 175 25 25 chr2 37935110 37935270 -212752584 + MLT1D LTR MaLR 346 505 0 258 319 26 9 chr2 37935804 37935920 -212751934 + L2 LINE L2 2412 2529 -785 471 217 212 29 chr2 37936032 37936285 -212751569 + L1MC4 LINE L1 6959 7256 -728 * 472 243 163 80 chr2 37936278 37936818 -212751036 + L1MC5 LINE L1 7260 7783 -178 1712 177 0 7 chr2 37936818 37937089 -212750765 + AluJo SINE Alu 24 292 -20 472 243 163 80 chr2 37937089 37937225 -212750629 + L1MC5 LINE L1 7783 7906 -55 233 268 14 14 chr2 37937414 37937479 -212750375 + (CATA)n Simple_repeat Simple_repeat 2 66 -73 465 215 323 0 chr2 37937479 37937609 -212750245 + MER45A DNA AcHobo 4 175 -3 233 268 14 14 chr2 37937609 37937681 -212750173 + (CATA)n Simple_repeat Simple_repeat 65 139 0 198 0 0 0 chr2 37937841 37937863 -212749991 + (TG)n Simple_repeat Simple_repeat 1 22 0 2470 85 0 0 chr2 37938028 37938333 -212749521 - AluSq SINE Alu -8 305 1 1239 259 107 63 chr2 37938482 37938694 -212749160 - L1MC4 LINE L1 -17 8025 7824 2030 135 0 3 chr2 37938694 37939019 -212748835 + AluSx SINE Alu 1 324 0 1239 259 107 63 chr2 37939019 37939152 -212748702 - L1MC4 LINE L1 -218 7824 7698 1671 209 0 3 chr2 37939152 37939458 -212748396 - AluJo SINE Alu -7 305 1 1239 259 107 63 chr2 37939458 37939902 -212747952 - L1MC4 LINE L1 -344 7698 7199 2664 114 25 39 chr2 37940051 37940489 -212747365 + MSTB1 LTR MaLR 1 432 0 808 252 122 28 chr2 37941040 37941401 -212746453 - L1ME3 LINE L1 -211 5951 5557 2249 120 7 0 chr2 37941599 37941900 -212745954 + AluSx SINE Alu 1 303 -9 2269 120 0 0 chr2 37942701 37943001 -212744853 + AluSq SINE Alu 1 300 -13 413 303 144 64 chr2 37943090 37943413 -212744441 + L2 LINE L2 2825 3189 -83 2198 113 7 0 chr2 37943413 37943705 -212744149 - AluSx SINE Alu -18 294 1 413 303 144 64 chr2 37943705 37943790 -212744064 + L2 LINE L2 3189 3266 -6 368 284 121 37 chr2 37944253 37944443 -212743411 + MIR SINE MIR 23 228 -34 1645 194 61 27 chr2 37944461 37944905 -212742949 + L1ME2 LINE L1 5696 6154 -10 1836 111 9 79 chr2 37944917 37945233 -212742621 - AluSx SINE Alu -18 294 1 2774 126 33 10 chr2 37945684 37946169 -212741685 + L1MB3 LINE L1 5686 6181 -2 745 124 0 0 chr2 37946227 37946340 -212741514 - AluSp/q SINE Alu -3 310 198 1939 130 7 33 chr2 37946409 37946716 -212741138 + AluJb SINE Alu 1 299 -13 306 0 0 0 chr2 37946716 37946750 -212741104 + (TA)n Simple_repeat Simple_repeat 2 35 0 648 294 56 36 chr2 37946871 37947208 -212740646 + MLT1I LTR MaLR 63 406 -3 442 314 71 35 chr2 37947209 37947580 -212740274 + L1MC4a LINE L1 4489 4884 -1262 1298 130 39 0 chr2 37947580 37947810 -212740044 - L1MB4 LINE L1 -2 6178 5940 442 314 71 35 chr2 37947810 37947929 -212739925 + L1MC4a LINE L1 4884 4997 -1149 2354 101 3 10 chr2 37948052 37948359 -212739495 + AluSq SINE Alu 2 306 -7 356 308 161 22 chr2 37948447 37948738 -212739116 + L1MC4a LINE L1 5259 5586 -2199 1183 153 0 110 chr2 37948912 37949166 -212738688 + AluJo SINE Alu 86 311 -1 319 205 0 24 chr2 37949187 37949270 -212738584 + L1MC4a LINE L1 5770 5850 -1958 2316 75 0 47 chr2 37949879 37950197 -212737657 - AluY SINE Alu -6 305 3 617 285 167 11 chr2 37950242 37950523 -212737331 + L3 LINE CR1 1242 1566 -11 2079 128 0 36 chr2 37950709 37951036 -212736818 - AluSx SINE Alu 0 312 1 957 167 39 0 chr2 37951060 37951216 -212736638 - AluJb SINE Alu -15 297 136 1964 144 3 3 chr2 37951767 37952079 -212735775 + AluSx SINE Alu 1 312 0 1773 177 13 0 chr2 37952093 37952392 -212735462 + AluJb SINE Alu 1 303 -9 1898 142 3 29 chr2 37952863 37953173 -212734681 + AluJb SINE Alu 1 302 -10 31 74 0 21 chr2 37954394 37954438 -212733416 + AT_rich Low_complexity Low_complexity 1 44 -49 2287 96 7 0 chr2 37954438 37954729 -212733125 - AluSx SINE Alu -19 293 1 31 74 0 21 chr2 37954729 37954779 -212733075 + AT_rich Low_complexity Low_complexity 44 93 0 35 24 0 0 chr2 37955011 37955053 -212732801 + AT_rich Low_complexity Low_complexity 1 42 0 2198 34 45 8 chr2 37955105 37955373 -212732481 + AluY SINE Alu 33 310 -1 2050 147 0 3 chr2 37955518 37955817 -212732037 + AluSx SINE Alu 1 298 -14 2570 56 0 0 chr2 37955819 37956123 -212731731 + AluY SINE Alu 1 304 -7 183 319 77 33 chr2 37956276 37956367 -212731487 - L2 LINE L2 -37 3235 3141 180 0 0 0 chr2 37956455 37956475 -212731379 + (T)n Simple_repeat Simple_repeat 1 20 0 195 282 107 10 chr2 37957188 37957291 -212730563 + MIR SINE MIR 124 236 -26 2338 90 0 7 chr2 37957723 37958024 -212729830 + AluSg SINE Alu 1 299 -11 1790 185 0 3 chr2 37958107 37958405 -212729449 - AluJb SINE Alu -15 297 1 1991 141 7 0 chr2 37958808 37959105 -212728749 - AluJb SINE Alu -13 299 1 2237 87 7 3 chr2 37959110 37959396 -212728458 - AluSc SINE Alu -22 287 1 278 265 20 48 chr2 37959403 37959550 -212728304 - L1ME LINE L1 -299 5822 5680 1641 158 4 4 chr2 37959566 37959825 -212728029 - AluJb SINE Alu -13 299 41 2323 100 6 0 chr2 37959837 37960148 -212727706 - AluSp SINE Alu 0 313 1 804 285 50 50 chr2 37960188 37960671 -212727183 + MLT1G3 LTR MaLR 13 560 -7 447 221 19 19 chr2 37960683 37960787 -212727067 + MIR3 SINE MIR 73 176 -32 2417 106 0 0 chr2 37961514 37961825 -212726029 + AluSq SINE Alu 3 313 0 768 313 90 36 chr2 37961965 37962579 -212725275 + L2 LINE L2 2463 3130 -142 2291 110 3 0 chr2 37962579 37962879 -212724975 - AluSx SINE Alu -11 301 1 768 313 90 36 chr2 37962879 37963016 -212724838 + L2 LINE L2 3130 3258 -14 425 141 16 0 chr2 37963505 37963569 -212724285 + LTR19A LTR ERV1 1 65 -421 46821 79 9 8 chr2 37963570 37964932 -212722922 + HERVFH19I LTR ERV1 1493 2852 -4867 2036 122 3 7 chr2 37964932 37965239 -212722615 - AluSx SINE Alu 0 306 1 46821 79 9 8 chr2 37965239 37967148 -212720706 + HERVFH19I LTR ERV1 2852 4758 -2961 2314 94 7 0 chr2 37967148 37967447 -212720407 + AluSg SINE Alu 1 301 -9 46821 79 9 8 chr2 37967447 37970292 -212717562 + HERVFH19I LTR ERV1 4758 7616 -103 1805 171 0 13 chr2 37970460 37970770 -212717084 - AluJo SINE Alu -6 306 1 528 236 93 28 chr2 37971999 37972215 -212715639 - L1ME LINE L1 -668 5498 5269 756 163 7 15 chr2 37972306 37972441 -212715413 - FLAM_C SINE Alu -4 139 6 2260 88 7 0 chr2 37972668 37972965 -212714889 + AluSg SINE Alu 1 299 -11 23 0 0 0 chr2 37973583 37973606 -212714248 + AT_rich Low_complexity Low_complexity 1 23 0 1669 166 0 53 chr2 37973630 37973872 -212713982 - AluJb SINE Alu -9 303 81 2274 100 3 3 chr2 37973872 37974171 -212713683 + AluSg SINE Alu 1 299 -11 1669 166 0 53 chr2 37974171 37974248 -212713606 - AluJb SINE Alu -231 81 1 271 228 49 54 chr2 37976952 37976970 -212710884 - L1ME LINE L1 -2893 3253 3236 1863 160 0 13 chr2 37976970 37977270 -212710584 - AluJb SINE Alu -16 296 1 271 228 49 54 chr2 37977270 37977435 -212710419 - L1ME LINE L1 -2910 3236 3071 368 316 47 60 chr2 37977618 37977784 -212710070 - HAL1b LINE L1 -875 473 306 2224 94 20 7 chr2 37977784 37978081 -212709773 + AluSg SINE Alu 1 301 -9 368 316 47 60 chr2 37978081 37978278 -212709576 - HAL1b LINE L1 -1042 306 115 1297 128 13 49 chr2 37978280 37978439 -212709415 - MER2 DNA MER2_type 0 345 195 1935 167 0 3 chr2 37978439 37978751 -212709103 + AluJb SINE Alu 1 311 -1 1297 128 13 49 chr2 37978751 37978816 -212709038 - MER2 DNA MER2_type -150 195 129 4677 120 12 140 chr2 37978816 37979414 -212708440 + Tigger3(Golem) DNA MER2_type 2 675 -2354 1941 157 10 3 chr2 37979414 37979719 -212708135 - AluJb SINE Alu -5 307 1 216 0 0 0 chr2 37979719 37979743 -212708111 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 485 114 114 0 chr2 37979743 37979813 -212708041 - AluJb SINE Alu -31 281 204 4677 120 12 140 chr2 37979813 37979979 -212707875 + Tigger3(Golem) DNA MER2_type 673 859 -2170 2371 106 0 0 chr2 37979979 37980280 -212707574 - AluSx SINE Alu -11 301 1 4677 120 12 140 chr2 37980280 37980589 -212707265 + Tigger3(Golem) DNA MER2_type 859 1206 -1823 2288 89 40 3 chr2 37980589 37980891 -212706963 - AluSq SINE Alu 0 313 1 4677 120 12 140 chr2 37980891 37981175 -212706679 + Tigger3(Golem) DNA MER2_type 1206 3029 0 851 174 0 0 chr2 37981175 37981306 -212706548 - MER2 DNA MER2_type -214 131 1 3082 23 12 3 chr2 37982156 37982500 -212705354 - L1PA4 LINE L1 -3 6152 5806 723 97 117 0 chr2 37982886 37982989 -212704865 + AluSq/x SINE Alu 2 116 -196 4746 165 84 60 chr2 37984374 37985431 -212702423 + Tigger6a DNA MER2_type 2 1083 0 3402 155 28 48 chr2 37985804 37986634 -212701220 + L1MB5 LINE L1 5009 5821 -353 2138 54 43 4 chr2 37986634 37986910 -212700944 + AluY SINE Alu 1 287 -24 3402 155 28 48 chr2 37986910 37987057 -212700797 + L1MB5 LINE L1 5821 5969 -205 698 314 147 33 chr2 37987087 37987119 -212700735 + L2 LINE L2 2034 2061 -1253 1820 141 30 27 chr2 37987119 37987418 -212700436 - AluSx SINE Alu -12 300 1 698 314 147 33 chr2 37987418 37987955 -212699899 + L2 LINE L2 2061 2668 -646 879 194 56 18 chr2 37987956 37988175 -212699679 - L1MB4 LINE L1 -6 6174 5973 1288 90 28 6 chr2 37988175 37988353 -212699501 - AluJo SINE Alu -9 303 122 2943 141 28 10 chr2 37988353 37988851 -212699003 - L1MB4 LINE L1 -209 5971 5465 2515 64 6 0 chr2 37988882 37989193 -212698661 + AluSp SINE Alu 1 313 0 1056 241 26 133 chr2 37989198 37989403 -212698451 + L2 LINE L2 1835 2060 -1212 2287 88 0 3 chr2 37989403 37989697 -212698157 - AluSq SINE Alu -18 295 3 1056 241 26 133 chr2 37989697 37990112 -212697742 + L2 LINE L2 2060 3049 -223 1611 120 0 0 chr2 37990581 37990806 -212697048 + AluSc SINE Alu 84 308 -1 701 258 127 64 chr2 37990810 37991327 -212696527 - L2 LINE L2 -164 3149 2598 261 0 0 0 chr2 37991748 37991777 -212696077 + (CCG)n Simple_repeat Simple_repeat 1 29 0 307 227 140 22 chr2 37992157 37992254 -212695600 - MIR SINE MIR -55 153 46 203 217 193 36 chr2 37992598 37992681 -212695173 - MIR SINE MIR -138 124 29 2210 103 3 7 chr2 37992748 37993049 -212694805 + AluSx SINE Alu 1 300 -12 2051 136 0 0 chr2 37993697 37993983 -212693871 - AluSx SINE Alu -26 286 1 333 293 93 20 chr2 37993985 37994135 -212693719 + MERVL LTR ERVL 513 673 -5091 253 333 70 19 chr2 37994188 37994344 -212693510 + MERVL LTR ERVL 827 990 -4774 2275 82 34 0 chr2 37994406 37994698 -212693156 + AluSc SINE Alu 1 302 -7 253 309 0 12 chr2 37994806 37994887 -212692967 + MERVL LTR ERVL 1256 1335 -4429 430 304 113 0 chr2 37995041 37995245 -212692609 + MERVL LTR ERVL 3947 4173 -1312 646 185 35 15 chr2 37995607 37995774 -212692080 + MLT1A1 LTR MaLR 2 210 -155 2052 121 7 0 chr2 37995774 37996161 -212691693 + AluSx SINE Alu 1 389 0 646 185 35 15 chr2 37996161 37996216 -212691638 + MLT1A1 LTR MaLR 210 262 -103 1086 285 61 33 chr2 37996216 37996644 -212691210 + L2 LINE L2 2825 3264 -49 1024 240 0 5 chr2 37996648 37996848 -212691006 + MER58A DNA MER1_type 26 224 0 480 244 70 35 chr2 37996864 37997036 -212690818 - L2 LINE L2 -1204 2110 1933 749 171 17 86 chr2 37997216 37997265 -212690589 - L1MB5 LINE L1 0 6174 6123 2473 76 0 3 chr2 37997265 37997568 -212690286 - AluSq SINE Alu -11 302 1 749 171 17 86 chr2 37997568 37997693 -212690161 - L1MB5 LINE L1 -51 6123 6012 33 56 0 0 chr2 37997743 37997797 -212690057 + AT_rich Low_complexity Low_complexity 1 54 0 413 297 118 9 chr2 37997812 37998041 -212689813 - L1MB5 LINE L1 -345 5817 5564 4133 268 52 53 chr2 37998041 37998190 -212689664 - L1MEc LINE L1 -4418 1978 1830 1997 121 3 34 chr2 37998190 37998487 -212689367 - AluSq SINE Alu -25 288 1 4133 268 52 53 chr2 37998487 37998675 -212689179 - L1MEc LINE L1 -4566 1830 1643 2360 75 0 14 chr2 37998675 37998969 -212688885 - AluY SINE Alu -21 290 1 4133 268 52 53 chr2 37998969 37999145 -212688709 - L1MEc LINE L1 -4753 1643 1468 2841 16 0 0 chr2 37999145 37999456 -212688398 - AluYa5 SINE Alu 0 311 1 4133 268 52 53 chr2 37999456 38000781 -212687073 - L1MEc LINE L1 -4928 1468 140 377 244 12 110 chr2 38000795 38000869 -212686985 - L1MB5 LINE L1 -753 5393 5342 1656 168 14 31 chr2 38000869 38001161 -212686693 - AluJo SINE Alu -22 290 4 377 244 12 110 chr2 38001161 38001250 -212686604 - L1MB5 LINE L1 -804 5342 5246 756 193 6 11 chr2 38001258 38001439 -212686415 + CT-rich Low_complexity Low_complexity 1 180 0 2111 124 10 0 chr2 38001439 38001729 -212686125 - AluSx SINE Alu -19 293 1 2299 110 0 3 chr2 38001812 38002122 -212685732 + AluSx SINE Alu 1 309 -3 234 176 72 24 chr2 38002611 38002736 -212685118 + (TTA)n Simple_repeat Simple_repeat 1 131 0 1689 82 137 4 chr2 38003038 38003293 -212684561 - AluSx SINE Alu -23 289 1 242 320 48 0 chr2 38003705 38003808 -212684046 + L1ME4a LINE L1 5799 5906 -215 270 285 89 0 chr2 38003832 38003955 -212683899 + L1ME4a LINE L1 5961 6094 -27 307 356 104 0 chr2 38004168 38004283 -212683571 + MIR SINE MIR 20 146 -116 2238 105 0 19 chr2 38004316 38004630 -212683224 - AluSg1 SINE Alu -1 308 1 302 252 155 32 chr2 38004861 38005016 -212682838 + MLT1J LTR MaLR 3 176 -335 2220 107 0 3 chr2 38005021 38005312 -212682542 + AluSx SINE Alu 1 290 -22 1537 107 243 8 chr2 38005352 38005595 -212682259 + AluSg SINE Alu 1 300 0 2320 78 0 13 chr2 38005794 38006101 -212681753 + AluSc SINE Alu 1 303 -6 322 241 51 58 chr2 38006106 38006243 -212681611 + MLT1J LTR MaLR 374 509 -2 1372 151 5 14 chr2 38006888 38007107 -212680747 - AluJb SINE Alu -15 297 81 361 235 0 12 chr2 38007107 38007188 -212680666 + MER103 DNA DNA 77 156 -10 2338 92 0 0 chr2 38007351 38007645 -212680209 - AluSq SINE Alu -19 294 1 2225 105 0 0 chr2 38007656 38007990 -212679864 - AluSx SINE Alu 0 334 1 2492 246 109 21 chr2 38008059 38009062 -212678792 + L2 LINE L2 1975 3062 -251 1167 205 142 8 chr2 38009062 38009330 -212678524 - AluY SINE Alu -2 309 6 318 289 52 60 chr2 38009385 38009617 -212678237 + L2 LINE L2 3083 3312 -1 1308 197 99 0 chr2 38010437 38010792 -212677062 - MER3 DNA MER1_type 0 2624 2235 493 194 0 86 chr2 38010794 38010933 -212676921 - MER3 DNA MER1_type -42 167 41 582 231 186 0 chr2 38010940 38011096 -212676758 + MIR SINE MIR 62 246 -16 2329 97 10 0 chr2 38011098 38011397 -212676457 - AluSx SINE Alu -10 302 1 238 220 0 0 chr2 38011406 38011456 -212676398 + (TTA)n Simple_repeat Simple_repeat 3 52 0 283 224 42 106 chr2 38011501 38011705 -212676149 + MLT1L LTR MaLR 1 267 -348 370 145 87 0 chr2 38011995 38012064 -212675790 + L1MA9 LINE L1 5833 5907 -384 1213 169 61 0 chr2 38012066 38012279 -212675575 + AluJb SINE Alu 87 312 0 1383 188 33 66 chr2 38012285 38012678 -212675176 + L1MA9 LINE L1 5894 6273 -39 1177 157 29 10 chr2 38012888 38013057 -212674797 - AluSq SINE Alu -21 292 117 186 118 0 0 chr2 38013057 38013091 -212674763 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1891 147 7 0 chr2 38013091 38013370 -212674484 - AluSx SINE Alu -28 284 4 1177 157 29 10 chr2 38013091 38013125 -212674729 - AluSq SINE Alu -196 117 85 297 303 33 16 chr2 38013387 38013509 -212674345 + MIR SINE MIR 120 243 -19 21 36 0 0 chr2 38013627 38013655 -212674199 + AT_rich Low_complexity Low_complexity 1 28 0 2062 109 14 0 chr2 38013791 38014095 -212673759 - AluY SINE Alu 0 308 1 530 338 192 25 chr2 38015096 38015439 -212672415 + L3 LINE CR1 134 419 -1158 1920 168 0 0 chr2 38015439 38015743 -212672111 + AluSx SINE Alu 1 304 -8 530 338 192 25 chr2 38015743 38015988 -212671866 + L3 LINE CR1 419 820 -757 1999 121 7 7 chr2 38016222 38016519 -212671335 - AluJo SINE Alu -15 297 1 425 262 153 70 chr2 38016660 38016889 -212670965 + L3 LINE CR1 1327 1574 -3 1219 137 0 0 chr2 38017091 38017266 -212670588 - AluSx SINE Alu -12 300 126 503 55 55 0 chr2 38017266 38017339 -212670515 - MADE1 DNA Mariner -3 77 1 962 111 0 0 chr2 38017339 38017465 -212670389 - AluSx SINE Alu -186 127 2 769 167 0 24 chr2 38017738 38017864 -212669990 + FLAM_C SINE Alu 2 124 -9 203 161 0 0 chr2 38018380 38018411 -212669443 + (TG)n Simple_repeat Simple_repeat 2 32 0 2195 116 0 0 chr2 38018487 38018781 -212669073 - AluSx SINE Alu -18 294 1 1642 87 0 9 chr2 38019471 38019689 -212668165 + AluSc SINE Alu 84 299 -10 302 264 165 0 chr2 38019827 38019948 -212667906 - MIR SINE MIR -46 216 76 2335 102 0 3 chr2 38020272 38020575 -212667279 + AluSx SINE Alu 1 302 -10 1906 156 0 14 chr2 38021447 38021742 -212666112 + AluJb SINE Alu 1 291 -21 527 228 277 0 chr2 38021892 38022094 -212665760 + MIR SINE MIR 5 262 0 21 36 0 0 chr2 38022619 38022647 -212665207 + AT_rich Low_complexity Low_complexity 1 28 0 276 275 0 0 chr2 38023994 38024054 -212663800 + MIR SINE MIR 38 97 -111 1793 193 113 16 chr2 38024089 38024540 -212663314 - MER50 LTR ERV1 0 734 240 273 263 6 103 chr2 38024782 38024938 -212662916 + MLT1J LTR MaLR 325 465 -46 331 313 38 31 chr2 38025263 38025423 -212662431 - MIR SINE MIR -5 257 97 1303 283 65 18 chr2 38025425 38025917 -212661937 - LTR38 LTR ERV1 -41 515 1 318 341 77 35 chr2 38026293 38026463 -212661391 + MIR3 SINE MIR 17 193 -15 234 212 12 59 chr2 38026639 38026724 -212661130 + CT-rich Low_complexity Low_complexity 5 85 0 2066 148 51 26 chr2 38026867 38027219 -212660635 - MER46B DNA MER2_type 0 236 1 231 263 126 0 chr2 38027395 38027490 -212660364 - MIR SINE MIR -56 206 100 1994 133 13 10 chr2 38028415 38028717 -212659137 + AluSx SINE Alu 3 305 -7 1121 127 29 0 chr2 38028855 38029028 -212658826 - AluSq SINE Alu -2 311 134 2145 127 7 0 chr2 38029028 38029327 -212658527 - AluSx SINE Alu -8 304 4 401 265 84 96 chr2 38029381 38029949 -212657905 + L1MEd LINE L1 713 1312 -4929 2214 92 14 0 chr2 38029949 38030243 -212657611 + AluY SINE Alu 1 298 -13 401 265 84 96 chr2 38030243 38030311 -212657543 + L1MEd LINE L1 1312 1379 -4862 378 197 28 0 chr2 38030472 38030543 -212657311 + U6 snRNA snRNA 1 73 -34 652 188 109 30 chr2 38030903 38031068 -212656786 - MER5B DNA MER1_type 0 178 1 385 188 150 53 chr2 38031635 38031768 -212656086 - MIR SINE MIR -12 250 105 1235 166 0 5 chr2 38031992 38032223 -212655631 - AluJb SINE Alu 0 315 86 1808 103 64 67 chr2 38032226 38032538 -212655316 - AluJb SINE Alu -1 311 1 1338 250 152 42 chr2 38032540 38033305 -212654549 + L2 LINE L2 2443 3308 -5 2081 93 65 4 chr2 38033639 38033918 -212653936 - AluSc SINE Alu -13 296 1 1888 117 3 96 chr2 38034786 38035120 -212652734 + AluSx SINE Alu 1 303 -9 734 233 146 31 chr2 38035748 38036036 -212651818 + L2 LINE L2 2988 3308 -5 358 326 8 0 chr2 38036036 38036165 -212651689 - MIR3 SINE MIR -71 137 8 214 125 21 21 chr2 38037446 38037494 -212650360 + (CCG)n Simple_repeat Simple_repeat 2 49 0 24 53 0 0 chr2 38037789 38037827 -212650027 + GC_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 38037859 38037887 -212649967 + GC_rich Low_complexity Low_complexity 1 28 0 270 0 0 0 chr2 38038009 38038039 -212649815 + (CA)n Simple_repeat Simple_repeat 2 31 0 203 329 73 0 chr2 38039292 38039374 -212648480 - MIR3 SINE MIR -26 182 95 573 103 0 0 chr2 38039563 38039641 -212648213 + AluJ/FLAM SINE Alu 2 79 -233 2646 97 10 79 chr2 38039649 38040052 -212647802 + MER51B LTR ERV1 2 376 -1 1540 127 5 0 chr2 38040052 38040272 -212647582 + AluSg/x SINE Alu 76 296 -16 1117 128 6 23 chr2 38040364 38040536 -212647318 + AluSx SINE Alu 3 171 -141 275 294 59 15 chr2 38040536 38040672 -212647182 + MIR SINE MIR 121 262 0 193 279 73 0 chr2 38040686 38040754 -212647100 + MIR SINE MIR 180 252 -10 2266 97 0 3 chr2 38040826 38041124 -212646730 + AluSg SINE Alu 1 297 -13 2138 113 0 13 chr2 38041126 38041435 -212646419 + AluSq SINE Alu 1 305 -8 2305 101 3 0 chr2 38041683 38041981 -212645873 - AluSq SINE Alu -14 299 1 1431 75 40 35 chr2 38042651 38042878 -212644976 + L1MA2 LINE L1 6077 6304 0 1784 147 21 4 chr2 38042896 38043175 -212644679 + AluJb SINE Alu 3 286 -26 261 0 0 0 chr2 38043176 38043205 -212644649 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 24 0 0 0 chr2 38043210 38043234 -212644620 + AT_rich Low_complexity Low_complexity 1 24 0 2140 102 23 16 chr2 38043356 38043661 -212644193 + AluSx SINE Alu 1 307 -5 271 227 91 83 chr2 38043957 38043980 -212643874 - MIR SINE MIR -11 251 230 2103 120 3 3 chr2 38043980 38044279 -212643575 + AluSg SINE Alu 1 299 -11 271 227 91 83 chr2 38044279 38044387 -212643467 - MIR SINE MIR -32 230 119 215 245 0 0 chr2 38044685 38044738 -212643116 + A-rich Low_complexity Low_complexity 1 53 0 1000 191 62 36 chr2 38045023 38045314 -212642540 + L1ME1 LINE L1 5767 6163 -3 1919 132 0 28 chr2 38045403 38045691 -212642163 + AluSx SINE Alu 1 280 -32 1177 125 0 11 chr2 38045714 38045890 -212641964 + AluSg/x SINE Alu 127 300 -10 830 240 27 14 chr2 38046095 38046316 -212641538 + L1MEc LINE L1 203 426 -6137 717 285 4 23 chr2 38046308 38046571 -212641283 + L1MEc LINE L1 1290 1547 -4837 * 2076 212 100 42 chr2 38046552 38046603 -212641251 + L1MEc LINE L1 1781 1828 -4735 2406 89 0 0 chr2 38046603 38046905 -212640949 + AluSq SINE Alu 1 302 -11 2076 212 100 42 chr2 38046905 38047513 -212640341 + L1MEc LINE L1 1828 2478 -4085 305 246 0 0 chr2 38048128 38048185 -212639669 + MER58B DNA MER1_type 1 57 -284 * 784 199 68 0 chr2 38048178 38048324 -212639530 + MER58B DNA MER1_type 182 337 -4 1006 299 180 67 chr2 38048371 38049643 -212638211 + L2 LINE L2 983 2580 -692 424 123 0 0 chr2 38049643 38049700 -212638154 + U6 snRNA snRNA 1 57 -50 1006 299 180 67 chr2 38049700 38050236 -212637618 + L2 LINE L2 2580 3054 -218 1697 168 10 27 chr2 38050702 38051000 -212636854 - AluJo SINE Alu -19 293 1 22 35 0 0 chr2 38051161 38051190 -212636664 + AT_rich Low_complexity Low_complexity 1 29 0 475 287 15 40 chr2 38051415 38051575 -212636279 + MIR3 SINE MIR 2 160 -66 2452 60 0 3 chr2 38051627 38051927 -212635927 + AluY SINE Alu 1 299 -12 387 41 0 0 chr2 38051937 38051986 -212635868 + (TA)n Simple_repeat Simple_repeat 1 49 0 183 114 0 0 chr2 38053757 38053792 -212634062 + (A)n Simple_repeat Simple_repeat 1 35 0 2043 137 10 16 chr2 38053952 38054266 -212633588 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 38055160 38055186 -212632668 + AT_rich Low_complexity Low_complexity 1 26 0 228 268 18 0 chr2 38055841 38055897 -212631957 - L2 LINE L2 -9 3263 3207 242 289 14 113 chr2 38056039 38056181 -212631673 - L2 LINE L2 -199 3073 2946 21 0 0 0 chr2 38056600 38056621 -212631233 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 38056930 38056961 -212630893 + AT_rich Low_complexity Low_complexity 1 31 0 2351 101 3 0 chr2 38057069 38057377 -212630477 + AluSp SINE Alu 1 309 -4 234 298 165 54 chr2 38057420 38057508 -212630346 + L2 LINE L2 1698 1775 -1539 2170 113 0 0 chr2 38057508 38057799 -212630055 + AluSc SINE Alu 2 292 -17 234 298 165 54 chr2 38057799 38058206 -212629648 + L2 LINE L2 1775 2248 -1066 217 330 156 52 chr2 38058293 38058581 -212629273 + L2 LINE L2 2432 2749 -565 895 231 176 33 chr2 38058583 38058942 -212628912 + L1MC4 LINE L1 7632 8041 -1 1584 220 0 0 chr2 38058949 38059254 -212628600 + AluJo SINE Alu 1 305 -7 2217 97 17 0 chr2 38059579 38059868 -212627986 + AluSc SINE Alu 1 294 -15 1895 133 27 7 chr2 38059880 38060173 -212627681 + AluSx SINE Alu 1 299 -13 216 0 0 0 chr2 38110289 38110313 -212577541 + (A)n Simple_repeat Simple_repeat 1 24 0 1036 230 16 24 chr2 38110435 38110747 -212577107 - LTR28 LTR ERV1 -141 495 342 500 249 23 50 chr2 38110752 38111035 -212576819 + LTR28 LTR ERV1 564 1459 -193 299 155 0 119 chr2 38111230 38111314 -212576540 - HsTC2 DNA Tc2 -1820 78 5 200 170 75 38 chr2 38111356 38111409 -212576445 - MIR SINE MIR -100 162 108 1859 145 3 23 chr2 38112207 38112517 -212575337 + AluSx SINE Alu 3 306 -6 876 69 0 0 chr2 38112599 38112715 -212575139 + (GAA)n Simple_repeat Simple_repeat 2 117 0 320 183 50 0 chr2 38113210 38113270 -212574584 - Alu SINE Alu -7 294 232 1039 100 0 7 chr2 38113271 38113411 -212574443 - AluSq/x SINE Alu -174 139 1 1965 133 0 10 chr2 38113862 38113874 -212573980 - AluSx SINE Alu -14 298 287 903 67 0 0 chr2 38113874 38113993 -212573861 + (TTCC)n Simple_repeat Simple_repeat 1 119 0 1965 133 0 10 chr2 38113993 38114281 -212573573 - AluSx SINE Alu -25 287 1 240 125 0 0 chr2 38114369 38114409 -212573445 + MLT1A1 LTR MaLR 4 43 -322 370 175 93 52 chr2 38114834 38114858 -212572996 - MER5A DNA MER1_type -80 109 87 2220 83 0 20 chr2 38114858 38115158 -212572696 - AluY SINE Alu -17 294 1 370 175 93 52 chr2 38115158 38115230 -212572624 - MER5A DNA MER1_type -102 87 9 231 320 144 7 chr2 38115271 38115424 -212572430 + MIR SINE MIR 37 210 -52 2050 94 31 3 chr2 38116621 38116908 -212570946 + AluSx SINE Alu 1 295 -17 1883 129 7 3 chr2 38116910 38117213 -212570641 + AluSx SINE Alu 1 304 -8 1219 120 112 56 chr2 38117915 38118148 -212569706 + AluJb SINE Alu 13 258 -54 1008 157 47 178 chr2 38119584 38119922 -212567932 + AluJo SINE Alu 1 294 -8 2406 112 0 0 chr2 38121394 38121736 -212566118 + AluSx SINE Alu 1 342 0 1525 204 147 7 chr2 38122599 38123071 -212564783 - L1MB7 LINE L1 -1 6183 5660 415 104 15 30 chr2 38123286 38123302 -212564552 - AluJo SINE Alu -163 149 134 2438 92 0 0 chr2 38123302 38123607 -212564247 - AluSc SINE Alu -4 305 1 415 104 15 30 chr2 38123607 38123657 -212564197 - AluJo SINE Alu -178 134 84 2656 87 95 7 chr2 38124255 38124667 -212563187 + LTR7 LTR ERV1 1 448 -2 554 153 20 0 chr2 38125054 38125152 -212562702 + MLT2B3 LTR ERVL 101 200 -354 412 59 0 15 chr2 38125188 38125256 -212562598 + L1PBa LINE L1 1 67 -6796 13656 171 40 9 chr2 38125280 38125385 -212562469 + L1PB1 LINE L1 2527 2627 -4240 1959 156 7 0 chr2 38125385 38125687 -212562167 - AluSx SINE Alu -8 304 1 13656 171 40 9 chr2 38125687 38129803 -212558051 + L1PB1 LINE L1 2627 6862 -5 1075 142 74 159 chr2 38131783 38132092 -212555762 + AluJo SINE Alu 16 298 -14 2050 143 0 7 chr2 38132438 38132745 -212555109 - AluSx SINE Alu -7 305 1 274 314 237 8 chr2 38134512 38134630 -212553224 + MIR3 SINE MIR 42 186 -22 299 207 82 59 chr2 38134859 38134994 -212552860 + L1MC5 LINE L1 7794 7931 -30 1787 161 7 16 chr2 38136147 38136452 -212551402 + AluJb SINE Alu 1 302 -10 3079 199 149 50 chr2 38136488 38136652 -212551202 - Charlie1 DNA MER1_type -1 2760 2614 2574 68 0 0 chr2 38136652 38136963 -212550891 + AluY SINE Alu 1 311 0 3079 199 149 50 chr2 38136963 38137017 -212550837 - Charlie1 DNA MER1_type -147 2614 2567 2567 64 0 0 chr2 38137017 38137328 -212550526 + AluY SINE Alu 1 311 0 3079 199 149 50 chr2 38137328 38137658 -212550196 - Charlie1 DNA MER1_type -194 2567 2271 1603 126 142 8 chr2 38137658 38137912 -212549942 + AluSx SINE Alu 6 293 -19 3079 199 149 50 chr2 38137912 38138689 -212549165 - Charlie1 DNA MER1_type -490 2271 1 2333 89 0 0 chr2 38139068 38139361 -212548493 + AluSc SINE Alu 1 293 -16 1840 154 0 20 chr2 38139740 38140033 -212547821 + AluJb SINE Alu 1 287 -25 1737 168 16 16 chr2 38140069 38140378 -212547476 + AluJo SINE Alu 1 309 -3 2256 96 0 0 chr2 38141033 38141313 -212546541 + AluSx SINE Alu 1 280 -32 195 42 0 0 chr2 38141313 38141337 -212546517 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 282 216 81 0 chr2 38141876 38141950 -212545904 - MIR SINE MIR -86 176 97 180 368 115 11 chr2 38142010 38142097 -212545757 - MIR SINE MIR -148 114 19 262 229 43 43 chr2 38143121 38143191 -212544663 + L2 LINE L2 3200 3269 -44 * 268 309 152 48 chr2 38143183 38143452 -212544402 - L3 LINE CR1 -288 1289 993 318 26 0 0 chr2 38144071 38144110 -212543744 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 229 368 0 0 chr2 38144258 38144345 -212543509 + MIR SINE MIR 25 111 -151 8298 55 1 0 chr2 38144349 38145314 -212542540 + LTR5 LTR ERVK 1 966 -3 181 204 111 19 chr2 38145389 38145443 -212542411 - MIR SINE MIR -8 254 196 242 214 0 0 chr2 38145493 38145535 -212542319 + MIR SINE MIR 60 101 -161 198 313 45 0 chr2 38145539 38145606 -212542248 - MIR SINE MIR -77 185 116 319 314 69 0 chr2 38145649 38145751 -212542103 - MIR SINE MIR -151 111 3 335 214 120 34 chr2 38146028 38146145 -212541709 + L2 LINE L2 3183 3309 -4 195 42 0 0 chr2 38148252 38148276 -212539578 + (CA)n Simple_repeat Simple_repeat 2 25 0 1200 248 52 75 chr2 38148396 38148755 -212539099 + L1MC4a LINE L1 5307 5646 -2162 1415 152 82 30 chr2 38148755 38149025 -212538829 - AluJb SINE Alu -28 284 1 1200 248 52 75 chr2 38149025 38149306 -212538548 + L1MC4a LINE L1 5646 5932 -1876 810 282 159 18 chr2 38149542 38150053 -212537801 + L2 LINE L2 2630 3224 -89 191 300 53 79 chr2 38151557 38151747 -212536107 - L2 LINE L2 -883 2431 2247 800 233 140 84 chr2 38152078 38152379 -212535475 - L2 LINE L2 -720 2594 2258 2352 75 20 0 chr2 38152379 38152672 -212535182 + AluSg SINE Alu 1 299 -11 800 233 140 84 chr2 38152672 38152821 -212535033 - L2 LINE L2 -1056 2258 2119 1428 215 97 34 chr2 38152826 38153118 -212534736 + Charlie4a DNA MER1_type 2 337 -1624 1859 177 0 7 chr2 38153118 38153423 -212534431 - AluSx SINE Alu -9 303 1 1428 215 97 34 chr2 38153423 38153605 -212534249 + Charlie4a DNA MER1_type 337 506 -2 695 178 0 0 chr2 38154307 38154436 -212533418 - L1ME3A LINE L1 -7 6163 6035 2196 94 0 14 chr2 38154671 38154989 -212532865 - AluY SINE Alu 0 314 1 351 235 20 59 chr2 38155416 38155526 -212532328 + GA-rich Low_complexity Low_complexity 6 110 -42 2361 69 0 16 chr2 38155526 38155830 -212532024 + AluY SINE Alu 1 299 -12 351 235 20 59 chr2 38155830 38155872 -212531982 + GA-rich Low_complexity Low_complexity 110 152 0 2316 102 3 0 chr2 38155997 38156301 -212531553 - AluSp SINE Alu -8 305 1 1165 250 43 85 chr2 38157092 38157189 -212530665 + L1ME3A LINE L1 5011 5110 -1060 1995 82 36 75 chr2 38157189 38157495 -212530359 + AluSg SINE Alu 1 294 -16 790 137 0 65 chr2 38157500 38157639 -212530215 + FLAM_C SINE Alu 1 130 -3 1165 250 43 85 chr2 38157639 38158138 -212529716 + L1ME3A LINE L1 5114 5557 -613 2096 154 0 0 chr2 38158138 38158450 -212529404 - AluSx SINE Alu 0 312 1 1165 250 43 85 chr2 38158450 38158830 -212529024 + L1ME3A LINE L1 5557 5951 -219 1541 176 103 0 chr2 38159180 38159452 -212528402 + AluJb SINE Alu 1 300 -12 27 0 0 0 chr2 38159526 38159553 -212528301 + AT_rich Low_complexity Low_complexity 1 27 0 180 336 88 26 chr2 38161235 38161348 -212526506 + MIR SINE MIR 12 131 -131 832 156 0 0 chr2 38162029 38162157 -212525697 - FLAM_A SINE Alu -5 128 1 2122 133 0 3 chr2 38162200 38162501 -212525353 + AluSx SINE Alu 1 300 -12 304 212 263 0 chr2 38163364 38163463 -212524391 - MIR SINE MIR 0 262 138 243 243 340 28 chr2 38164114 38164258 -212523596 - MIR SINE MIR -40 222 34 245 136 68 51 chr2 38164655 38164714 -212523140 - L2 LINE L2 0 3313 3254 398 272 72 33 chr2 38165774 38165904 -212521950 - MER5A DNA MER1_type -2 187 47 2058 129 31 47 chr2 38165904 38166290 -212521564 - L1PA16 LINE L1 0 6166 5787 398 272 72 33 chr2 38166290 38166339 -212521515 - MER5A DNA MER1_type -142 47 1 204 302 32 0 chr2 38167004 38167067 -212520787 - MER5A DNA MER1_type -116 73 9 2220 106 3 0 chr2 38167664 38167956 -212519898 + AluSp SINE Alu 1 293 -20 1416 98 0 0 chr2 38168400 38168584 -212519270 + AluSq SINE Alu 75 258 -55 405 0 0 0 chr2 38168590 38168635 -212519219 + (CA)n Simple_repeat Simple_repeat 2 46 0 315 0 0 0 chr2 38168675 38168710 -212519144 + (CA)n Simple_repeat Simple_repeat 2 36 0 1007 106 82 12 chr2 38169006 38169176 -212518678 - MER30 DNA MER1_type -48 182 1 24 53 0 0 chr2 38170226 38170264 -212517590 + AT_rich Low_complexity Low_complexity 1 38 0 523 255 120 30 chr2 38170331 38170531 -212517323 + MIR SINE MIR 1 218 -44 239 296 53 61 chr2 38170730 38170862 -212516992 - MIR SINE MIR -69 193 63 24 0 0 0 chr2 38171007 38171031 -212516823 + AT_rich Low_complexity Low_complexity 1 24 0 195 69 0 0 chr2 38171866 38171895 -212515959 + (TA)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr2 38172943 38172971 -212514883 + AT_rich Low_complexity Low_complexity 1 28 0 642 216 312 0 chr2 38173531 38173730 -212514124 + MIR SINE MIR 2 262 0 1790 169 13 25 chr2 38174755 38175069 -212512785 + AluJb SINE Alu 1 310 -2 187 196 22 0 chr2 38175251 38175297 -212512557 - L2 LINE L2 -417 2855 2809 279 0 0 0 chr2 38175660 38175691 -212512163 + (T)n Simple_repeat Simple_repeat 1 31 0 290 182 216 23 chr2 38176310 38176398 -212511456 + L2 LINE L2 3163 3267 -5 2468 74 0 6 chr2 38176415 38176726 -212511128 + AluY SINE Alu 1 309 -2 270 297 31 23 chr2 38178013 38178141 -212509713 - MER112 DNA MER1_type -13 247 119 2079 132 3 3 chr2 38178914 38179209 -212508645 + AluSx SINE Alu 1 295 -17 2158 126 0 0 chr2 38180236 38180530 -212507324 + AluSx SINE Alu 1 294 -18 2423 71 3 0 chr2 38180530 38180825 -212507029 + AluSp SINE Alu 1 296 -17 1533 143 96 35 chr2 38180827 38181170 -212506684 + MER47A DNA MER2_type 1 364 -2 724 275 180 48 chr2 38181804 38182447 -212505407 - L1M4 LINE L1 -2688 3458 2731 1217 299 30 30 chr2 38183327 38183765 -212504089 - L2 LINE L2 0 3313 2876 213 197 0 82 chr2 38183935 38183996 -212503858 + L3 LINE CR1 1519 1574 -3 246 32 0 0 chr2 38184520 38184551 -212503303 + (CA)n Simple_repeat Simple_repeat 2 32 0 205 301 72 12 chr2 38184581 38184664 -212503190 + MIR SINE MIR 20 107 -155 1172 123 0 0 chr2 38185359 38185521 -212502333 - AluSp SINE Alu -15 298 137 2058 134 0 3 chr2 38185521 38185819 -212502035 - AluSq SINE Alu -16 297 1 231 306 59 24 chr2 38187088 38187173 -212500681 - L2 LINE L2 0 3313 3226 333 331 69 70 chr2 38187444 38188067 -212499787 - L2 LINE L2 -10 3262 2587 354 295 80 46 chr2 38188076 38188251 -212499603 - MIR SINE MIR -46 216 38 2225 105 3 0 chr2 38188977 38189273 -212498581 + AluSp SINE Alu 1 297 -16 1343 217 76 3 chr2 38190274 38190534 -212497320 + MER58B DNA MER1_type 1 289 -2131 1866 146 56 9 chr2 38190534 38190856 -212496998 + MER1B DNA MER1_type 1 337 0 1343 217 76 3 chr2 38190856 38190909 -212496945 + MER58B DNA MER1_type 289 337 -4 207 319 51 97 chr2 38190936 38191193 -212496661 + L2 LINE L2 2869 3113 -159 21 0 0 0 chr2 38191224 38191245 -212496609 + AT_rich Low_complexity Low_complexity 1 21 0 270 132 75 0 chr2 38191611 38191664 -212496190 + L1MC/D LINE L1 5747 5803 -2005 1476 151 36 4 chr2 38191759 38192011 -212495843 + AluJo SINE Alu 23 282 -30 338 279 299 0 chr2 38193092 38193246 -212494608 - MIR SINE MIR -34 228 29 188 196 0 20 chr2 38195132 38195183 -212492671 + (CATA)n Simple_repeat Simple_repeat 1 50 0 1110 281 47 7 chr2 38195200 38195652 -212492202 - L1MC/D LINE L1 -757 5389 5192 302 264 66 11 chr2 38195790 38195881 -212491973 - L1MC4 LINE L1 -1333 6709 6614 259 255 21 32 chr2 38195881 38195975 -212491879 - L1MC/D LINE L1 -1191 4955 4863 949 220 116 22 chr2 38196198 38196430 -212491424 - MIR SINE MIR -7 255 2 2362 82 3 0 chr2 38197690 38197993 -212489861 + AluSc SINE Alu 3 306 -3 2269 91 27 0 chr2 38199080 38199376 -212488478 - AluSq SINE Alu -9 304 1 2185 190 46 8 chr2 38199503 38200201 -212487653 + L1M4 LINE L1 4834 5561 -617 241 61 0 0 chr2 38200197 38200230 -212487624 - L1M LINE L1 -701 5420 5388 * 1510 167 145 19 chr2 38200423 38200747 -212487107 + MLT1A1 LTR MaLR 1 365 0 903 222 91 17 chr2 38201030 38201260 -212486594 + MIR SINE MIR 8 254 -8 210 119 0 153 chr2 38201781 38201840 -212486014 + MIR SINE MIR 97 146 -62 590 150 88 18 chr2 38202221 38202334 -212485520 + MER5A DNA MER1_type 1 121 -68 480 129 0 13 chr2 38202736 38202953 -212484901 + AluSx SINE Alu 1 301 -9 22 0 0 0 chr2 38203288 38203310 -212484544 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 38203808 38203829 -212484025 + AT_rich Low_complexity Low_complexity 1 21 0 1230 20 14 0 chr2 38203829 38203976 -212483878 - L1PA4 LINE L1 -4 6151 6003 267 385 21 0 chr2 38204729 38204825 -212483029 + MIR SINE MIR 13 110 -152 274 200 0 35 chr2 38204846 38204931 -212482923 + (CTA)n Simple_repeat Simple_repeat 1 82 0 207 312 64 0 chr2 38205637 38205746 -212482108 - MIR SINE MIR -13 249 134 2533 70 3 0 chr2 38205980 38206323 -212481531 + AluSp SINE Alu 1 344 0 189 171 0 0 chr2 38206386 38206421 -212481433 + T-rich Low_complexity Low_complexity 2 36 0 317 250 75 0 chr2 38206678 38206758 -212481096 + L2 LINE L2 3227 3312 -1 337 284 11 11 chr2 38207702 38207797 -212480057 + MIR SINE MIR 44 138 -70 2222 98 0 13 chr2 38207813 38208119 -212479735 + AluSg SINE Alu 9 310 0 22 56 0 0 chr2 38208564 38208600 -212479254 + AT_rich Low_complexity Low_complexity 1 36 0 744 171 196 0 chr2 38208750 38208908 -212478946 + MER5A DNA MER1_type 1 189 0 1171 177 25 0 chr2 38208957 38209160 -212478694 + MER58B DNA MER1_type 131 338 -3 2244 81 3 17 chr2 38209267 38209565 -212478289 - AluSq SINE Alu -19 294 1 255 336 86 23 chr2 38209688 38209816 -212478038 - MIR3 SINE MIR -66 142 7 2385 63 7 10 chr2 38211374 38211677 -212476177 - AluY SINE Alu -9 302 1 1585 164 27 37 chr2 38211677 38211976 -212475878 - AluJb SINE Alu -14 298 3 1701 159 14 14 chr2 38213138 38213427 -212474427 - AluJo SINE Alu -23 289 1 27 29 0 0 chr2 38213436 38213470 -212474384 + AT_rich Low_complexity Low_complexity 1 34 0 34 65 0 0 chr2 38213674 38213736 -212474118 + AT_rich Low_complexity Low_complexity 1 62 0 1981 149 0 13 chr2 38213824 38214125 -212473729 + AluSx SINE Alu 1 297 -15 273 326 42 0 chr2 38214194 38214289 -212473565 - L2 LINE L2 -51 3221 3123 22 0 0 0 chr2 38214311 38214333 -212473521 + AT_rich Low_complexity Low_complexity 1 22 0 488 289 23 35 chr2 38214579 38214763 -212473091 + MIR SINE MIR 42 221 -41 2339 78 0 10 chr2 38215647 38215955 -212471899 + AluY SINE Alu 1 305 -6 219 311 74 33 chr2 38216185 38216307 -212471547 - MER5A DNA MER1_type 0 189 63 3688 172 40 18 chr2 38216354 38217150 -212470704 - L1MC3 LINE L1 -2 7783 6970 27 0 0 0 chr2 38217158 38217185 -212470669 + AT_rich Low_complexity Low_complexity 1 27 0 448 116 63 32 chr2 38217337 38217432 -212470422 - L1MC3 LINE L1 -1866 5942 5845 323 266 174 0 chr2 38217490 38217599 -212470255 + MIR SINE MIR 77 204 -58 3714 166 4 9 chr2 38217612 38218300 -212469554 - L1 LINE L1 -1650 4496 3812 431 254 0 0 chr2 38218297 38218419 -212469435 + L1MA4 LINE L1 5039 5160 -986 * 758 179 8 0 chr2 38218419 38218542 -212469312 + AluSq/x SINE Alu 1 124 -189 441 0 0 0 chr2 38218543 38218592 -212469262 + (CA)n Simple_repeat Simple_repeat 2 50 0 5642 139 23 9 chr2 38218592 38219712 -212468142 + L1MA4 LINE L1 5161 6300 0 787 273 84 20 chr2 38219756 38220148 -212467706 - L1MC/D LINE L1 -2075 5733 5317 798 196 33 0 chr2 38220476 38220629 -212467225 - AluJo SINE Alu -8 294 137 701 190 190 0 chr2 38220880 38221064 -212466790 + MER20 DNA MER1_type 1 219 0 656 167 15 45 chr2 38221757 38221854 -212466000 - AluJo SINE Alu -184 128 34 2324 208 208 54 chr2 38221854 38222738 -212465116 + LTR28 LTR ERV1 1 1020 0 656 167 15 45 chr2 38222738 38222772 -212465082 - AluJo SINE Alu -278 34 1 324 289 37 7 chr2 38222855 38222990 -212464864 - L1ME3 LINE L1 -8 6154 6016 222 277 145 12 chr2 38223148 38223231 -212464623 + L2 LINE L2 3200 3293 -20 2214 122 10 3 chr2 38223490 38223801 -212464053 + AluSq SINE Alu 1 313 0 352 240 190 10 chr2 38224867 38225062 -212462792 - MIR SINE MIR -18 244 25 1962 143 3 3 chr2 38225558 38225858 -212461996 + AluJb SINE Alu 1 300 -12 883 173 120 0 chr2 38226036 38226227 -212461627 - MER20 DNA MER1_type 0 219 6 1926 106 3 93 chr2 38227464 38227786 -212460068 - AluSq SINE Alu -20 293 1 33 25 0 0 chr2 38228180 38228220 -212459634 + AT_rich Low_complexity Low_complexity 1 40 0 2349 86 0 10 chr2 38228596 38228899 -212458955 + AluSc SINE Alu 1 300 -9 489 308 201 5 chr2 38229333 38229547 -212458307 - MIR SINE MIR -5 257 2 209 248 9 138 chr2 38229569 38229678 -212458176 - L2 LINE L2 0 3272 3178 294 281 94 16 chr2 38230390 38230518 -212457336 + L2 LINE L2 3171 3308 -5 24 53 0 0 chr2 38230665 38230703 -212457151 + AT_rich Low_complexity Low_complexity 1 38 0 307 270 196 0 chr2 38230823 38230971 -212456883 - MER5B DNA MER1_type -1 177 1 2169 173 23 50 chr2 38231514 38231999 -212455855 - MER82 DNA MER2_type -181 472 1 532 230 110 64 chr2 38232019 38232134 -212455720 + L1MEc LINE L1 1941 2049 -4166 1017 225 28 0 chr2 38232134 38232352 -212455502 - MER58A DNA MER1_type 0 224 1 532 230 110 64 chr2 38232352 38232697 -212455157 + L1MEc LINE L1 2049 2381 -3834 418 197 0 0 chr2 38232744 38232820 -212455034 + Tigger5 DNA MER2_type 2 77 -2246 359 176 95 0 chr2 38232879 38232953 -212454901 + Tigger5 DNA MER2_type 2243 2323 0 823 218 32 11 chr2 38232980 38233260 -212454594 + L1MEc LINE L1 2468 2753 -3462 372 170 32 0 chr2 38233570 38233664 -212454190 + L1MA8 LINE L1 6191 6287 -4 27 73 0 0 chr2 38233771 38233826 -212454028 + AT_rich Low_complexity Low_complexity 1 55 0 1980 121 0 26 chr2 38234751 38235056 -212452798 - AluSx SINE Alu -15 297 1 550 178 0 0 chr2 38236829 38236919 -212450935 - 5S rRNA rRNA -31 90 1 381 368 8 8 chr2 38237414 38237539 -212450315 - MIR SINE MIR -67 141 17 229 383 11 11 chr2 38237743 38237837 -212450017 + L3 LINE CR1 35 128 -1449 181 265 15 29 chr2 38237941 38238009 -212449845 + L3 LINE CR1 262 328 -1249 583 239 175 1 chr2 38238061 38238250 -212449604 - MIR SINE MIR 0 262 39 363 331 277 29 chr2 38238344 38238939 -212448915 + L3 LINE CR1 577 1319 -258 231 325 67 42 chr2 38238942 38239062 -212448792 + MIR SINE MIR 137 259 -3 474 291 126 30 chr2 38239083 38239313 -212448541 - MIR SINE MIR -6 256 5 215 250 0 0 chr2 38239322 38239362 -212448492 + L3 LINE CR1 1400 1439 -138 2358 104 0 0 chr2 38239455 38239763 -212448091 - AluSx SINE Alu -4 308 1 229 263 13 66 chr2 38240382 38240458 -212447396 - MIR3 SINE MIR -47 161 90 554 326 63 78 chr2 38240577 38240908 -212446946 - L2 LINE L2 -5 3267 2942 48 32 0 0 chr2 38243852 38243914 -212443940 + GC_rich Low_complexity Low_complexity 1 62 0 1749 161 20 16 chr2 38244798 38245102 -212442752 - AluJo SINE Alu -7 305 1 431 127 0 0 chr2 38246222 38246285 -212441569 - AluS SINE Alu -247 63 1 245 293 147 0 chr2 38246619 38246694 -212441160 + L2 LINE L2 2555 2640 -674 230 0 0 32 chr2 38246894 38246925 -212440929 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 886 125 0 0 chr2 38246925 38247045 -212440809 - AluSq/x SINE Alu -192 120 1 204 333 96 30 chr2 38247411 38247546 -212440308 + L2 LINE L2 2387 2530 -784 1731 122 43 79 chr2 38247732 38248036 -212439818 + AluSx SINE Alu 1 293 -19 2409 77 0 3 chr2 38248285 38248597 -212439257 + AluSq SINE Alu 1 311 -2 1117 151 6 0 chr2 38248598 38248777 -212439077 + AluSg/x SINE Alu 133 312 0 1916 117 0 50 chr2 38248885 38249223 -212438631 + AluSx SINE Alu 1 323 0 336 309 139 0 chr2 38249305 38249454 -212438400 + MIR SINE MIR 16 181 -59 231 36 0 0 chr2 38249454 38249482 -212438372 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 696 284 28 19 chr2 38249509 38249724 -212438130 + MIR SINE MIR 44 260 -2 212 246 35 0 chr2 38250284 38250341 -212437513 - L2 LINE L2 0 3272 3214 38 0 0 0 chr2 38250766 38250804 -212437050 + AT_rich Low_complexity Low_complexity 1 38 0 752 125 0 0 chr2 38250804 38250908 -212436946 - U6 snRNA snRNA -3 104 1 635 140 59 15 chr2 38250908 38251044 -212436810 - L1MB7 LINE L1 -42 6142 6001 251 241 62 62 chr2 38251094 38251206 -212436648 - LTR16C LTR ERVL -379 112 1 465 370 65 12 chr2 38251263 38251585 -212436269 + L2 LINE L2 2309 2647 -667 205 340 42 35 chr2 38252088 38252232 -212435622 - L2 LINE L2 -1374 1940 1796 4218 149 29 9 chr2 38252351 38253124 -212434730 + L1MB3 LINE L1 5395 6182 -1 2415 81 7 0 chr2 38253795 38254092 -212433762 + AluSp SINE Alu 1 299 -14 2146 131 0 3 chr2 38254137 38254434 -212433420 - AluSx SINE Alu -16 296 1 273 284 40 14 chr2 38255999 38256073 -212431781 + MIR SINE MIR 82 157 -105 1786 149 0 84 chr2 38256251 38256573 -212431281 + AluSx SINE Alu 1 295 -17 3425 114 20 2 chr2 38256835 38257333 -212430521 - MER84 LTR ERV1 0 507 1 904 215 0 23 chr2 38258091 38258263 -212429591 + MER5B DNA MER1_type 1 168 -10 4156 200 50 15 chr2 38258320 38259285 -212428569 - Charlie1a DNA MER1_type -1307 1454 444 1861 167 7 3 chr2 38259285 38259590 -212428264 - AluSx SINE Alu -2 310 5 4156 200 50 15 chr2 38259590 38259713 -212428141 - Charlie1a DNA MER1_type -2317 444 327 1787 133 111 11 chr2 38259785 38259809 -212428045 + L1PB4 LINE L1 5753 5773 -383 438 20 0 0 chr2 38259809 38259860 -212427994 + (CA)n Simple_repeat Simple_repeat 1 51 0 1787 133 111 11 chr2 38259860 38260196 -212427658 + L1PB4 LINE L1 5773 6149 -7 457 286 57 10 chr2 38260191 38260383 -212427471 + L1MEc LINE L1 111 311 -6085 * 857 154 10 170 chr2 38260470 38260581 -212427273 - Charlie1a DNA MER1_type -2464 297 170 2169 134 3 0 chr2 38260581 38260886 -212426968 + AluSq SINE Alu 1 306 -7 857 154 10 170 chr2 38260886 38261129 -212426725 - Charlie1a DNA MER1_type -2591 170 1 823 237 28 28 chr2 38261863 38262116 -212425738 + LTR16A LTR ERVL 196 448 -2 206 211 0 0 chr2 38263243 38263288 -212424566 + MIR SINE MIR 115 160 -48 304 315 87 93 chr2 38263561 38264280 -212423574 - L1M2 LINE L1 -5720 1129 353 2470 56 0 3 chr2 38264585 38264890 -212422964 + AluY SINE Alu 1 304 -7 310 42 42 0 chr2 38266176 38266224 -212421630 + (TA)n Simple_repeat Simple_repeat 1 50 0 320 141 56 14 chr2 38266225 38266296 -212421558 - L1MCa LINE L1 -4358 2068 1995 292 188 43 14 chr2 38266300 38266369 -212421485 - MIR SINE MIR -70 192 122 565 198 14 14 chr2 38266929 38267084 -212420770 - L1ME4a LINE L1 -6 6115 5961 234 0 0 0 chr2 38267095 38267121 -212420733 + (TG)n Simple_repeat Simple_repeat 2 27 0 205 311 33 16 chr2 38267299 38267360 -212420494 - MIR SINE MIR -177 85 24 364 279 19 62 chr2 38268949 38269110 -212418744 - L2 LINE L2 -1 3312 3159 * 372 310 71 10 chr2 38269108 38269305 -212418549 - L2 LINE L2 -237 3035 2827 433 338 29 20 chr2 38269610 38269814 -212418040 + MIR3 SINE MIR 3 208 0 548 260 123 53 chr2 38269834 38270061 -212417793 - MIR SINE MIR 0 262 20 21 0 0 0 chr2 38270501 38270522 -212417332 + AT_rich Low_complexity Low_complexity 1 21 0 2407 101 0 0 chr2 38270631 38270937 -212416917 + AluSp SINE Alu 1 306 -7 861 129 8 8 chr2 38270943 38271075 -212416779 + AluSg/x SINE Alu 163 294 -16 735 104 37 0 chr2 38271088 38271223 -212416631 - Charlie5 DNA MER1_type -59 2553 2414 1694 141 22 51 chr2 38271350 38271663 -212416191 - AluJo SINE Alu -8 304 1 593 208 104 47 chr2 38272426 38272638 -212415216 + MER112 DNA MER1_type 1 224 -36 2192 65 0 7 chr2 38272918 38273195 -212414659 - AluSc SINE Alu -34 275 1 441 318 57 11 chr2 38273385 38273589 -212414265 - MIR SINE MIR 0 262 50 22 0 0 0 chr2 38274791 38274813 -212413041 + AT_rich Low_complexity Low_complexity 1 22 0 340 250 8 31 chr2 38275267 38275395 -212412459 + CT-rich Low_complexity Low_complexity 1 125 0 2283 104 0 3 chr2 38275757 38276054 -212411800 + AluSc SINE Alu 1 296 -13 183 314 0 0 chr2 38276512 38276563 -212411291 - L2 LINE L2 -17 3255 3205 1577 168 0 87 chr2 38277164 38277511 -212410343 + AluJb SINE Alu 3 312 0 268 310 10 0 chr2 38278142 38278242 -212409612 + L1MC4a LINE L1 5829 5929 -1879 463 228 64 142 chr2 38280408 38280844 -212407010 + MLT1H LTR MaLR 50 567 0 1420 325 72 29 chr2 38281684 38282372 -212405482 + HAL1 LINE L1 155 896 -1611 2012 120 0 66 chr2 38282372 38282706 -212405148 + AluJo SINE Alu 1 312 0 1420 325 72 29 chr2 38282706 38282959 -212404895 + HAL1 LINE L1 896 1137 -1370 1429 265 46 24 chr2 38283030 38283487 -212404367 + HAL1 LINE L1 1464 1930 -577 3615 215 164 85 chr2 38283586 38283946 -212403908 - L2 LINE L2 -751 2563 2233 221 29 0 57 chr2 38283946 38283981 -212403873 + (TATAA)n Simple_repeat Simple_repeat 1 33 0 3615 215 164 85 chr2 38283981 38283992 -212403862 - L2 LINE L2 -1081 2233 2224 278 120 0 60 chr2 38283992 38284033 -212403821 + FLAM SINE Alu 81 120 -182 198 0 0 0 chr2 38284033 38284055 -212403799 + (TTA)n Simple_repeat Simple_repeat 2 23 0 3615 215 164 85 chr2 38284063 38284094 -212403760 - L2 LINE L2 -1090 2224 2197 275 51 51 17 chr2 38284094 38284153 -212403701 + (CA)n Simple_repeat Simple_repeat 2 62 0 3615 215 164 85 chr2 38284153 38285289 -212402565 - L2 LINE L2 -1117 2197 849 948 227 252 0 chr2 38285615 38285932 -212401922 - LTR16A LTR ERVL 0 450 54 1944 149 17 0 chr2 38286626 38286922 -212400932 + AluJo SINE Alu 6 306 -6 294 321 0 12 chr2 38288144 38288228 -212399626 - MIR3 SINE MIR -15 193 111 22 56 0 19 chr2 38288874 38288901 -212398953 + AT_rich Low_complexity Low_complexity 1 27 -26 1426 148 30 112 chr2 38288901 38289232 -212398622 + AluYb8 SINE Alu 1 304 -14 22 56 0 19 chr2 38289232 38289258 -212398596 + AT_rich Low_complexity Low_complexity 27 53 0 183 129 0 0 chr2 38289728 38289759 -212398095 + (CAGGC)n Simple_repeat Simple_repeat 2 32 0 240 35 0 0 chr2 38289843 38289872 -212397982 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 644 58 23 0 chr2 38290404 38290490 -212397364 + AluSg/x SINE Alu 219 306 -3 1187 144 44 0 chr2 38290728 38290909 -212396945 - MER5A DNA MER1_type 0 189 1 270 56 0 0 chr2 38291508 38291544 -212396310 + (TG)n Simple_repeat Simple_repeat 1 36 0 1704 163 3 48 chr2 38292557 38292870 -212394984 - AluJb SINE Alu -13 299 1 270 191 36 12 chr2 38293455 38293539 -212394315 + (TA)n Simple_repeat Simple_repeat 1 86 0 690 296 76 9 chr2 38293669 38293892 -212393962 - MIR SINE MIR -2 260 23 207 0 0 0 chr2 38296138 38296161 -212391693 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 330 26 0 0 chr2 38296997 38297036 -212390818 + (TG)n Simple_repeat Simple_repeat 1 39 0 284 240 190 0 chr2 38297071 38297171 -212390683 + MER20B DNA MER1_type 67 185 -598 808 299 51 16 chr2 38297252 38297720 -212390134 - MLT1K LTR MaLR 0 588 67 2282 120 0 3 chr2 38297826 38298135 -212389719 - AluSx SINE Alu -4 308 1 1912 170 3 0 chr2 38298299 38298599 -212389255 + AluJo SINE Alu 1 301 -11 738 167 68 0 chr2 38299310 38299442 -212388412 + MER30 DNA MER1_type 1 141 -89 986 157 0 41 chr2 38299459 38299631 -212388223 - AluSx SINE Alu -23 289 125 279 0 0 0 chr2 38299640 38299671 -212388183 + (TG)n Simple_repeat Simple_repeat 2 32 0 312 339 24 0 chr2 38299777 38299901 -212387953 + L1ME LINE L1 43 169 -5901 2905 64 111 7 chr2 38300049 38300455 -212387399 - LTR7 LTR ERV1 -2 448 1 2243 103 73 14 chr2 38300455 38300823 -212387031 - HERVH LTR ERV1 0 7713 7324 1193 124 89 0 chr2 38300823 38301025 -212386829 - HERVH LTR ERV1 -1894 5819 5600 3723 125 6 0 chr2 38301026 38301555 -212386299 - HERVH LTR ERV1 -2564 5149 4618 * 5847 90 4 2 chr2 38301553 38302365 -212385489 - HERVH LTR ERV1 -3761 3952 3140 * 14775 91 21 20 chr2 38302362 38304551 -212383303 - HERVH LTR ERV1 -4729 2984 793 380 77 31 31 chr2 38304571 38304636 -212383218 - LTR7 LTR ERV1 -40 410 346 1004 134 0 0 chr2 38304637 38304771 -212383083 - AluSx SINE Alu -178 134 1 674 134 0 0 chr2 38304771 38304868 -212382986 + MER30 DNA MER1_type 134 230 0 1677 278 175 22 chr2 38305279 38305850 -212382004 + L2 LINE L2 2013 2495 -818 2126 123 7 0 chr2 38305850 38306143 -212381711 + AluSx SINE Alu 1 295 -17 1677 278 175 22 chr2 38306143 38306519 -212381335 + L2 LINE L2 2495 3111 -202 574 237 26 46 chr2 38307070 38307222 -212380632 + L2 LINE L2 3160 3308 -5 680 307 68 51 chr2 38307388 38307629 -212380225 + L2 LINE L2 2596 2831 -482 2258 104 0 19 chr2 38307629 38307938 -212379916 - AluSx SINE Alu -9 303 1 680 307 68 51 chr2 38307938 38308394 -212379460 + L2 LINE L2 2831 3313 0 247 229 33 0 chr2 38308428 38308489 -212379365 + L2 LINE L2 3008 3070 -243 278 339 55 16 chr2 38308690 38308817 -212379037 - MIR SINE MIR -128 134 3 3020 275 67 27 chr2 38310561 38310925 -212376929 + L2 LINE L2 2041 2389 -924 2061 137 0 0 chr2 38310925 38311218 -212376636 - AluSx SINE Alu -19 293 1 3020 275 67 27 chr2 38311218 38311929 -212375925 + L2 LINE L2 2389 3161 -152 1703 152 61 0 chr2 38311929 38312046 -212375808 + AluJo SINE Alu 3 111 -201 249 0 73 0 chr2 38312046 38312087 -212375767 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 1703 152 61 0 chr2 38312087 38312233 -212375621 + AluJo SINE Alu 111 282 -30 3020 275 67 27 chr2 38312233 38312316 -212375538 + L2 LINE L2 3161 3239 -74 238 246 66 0 chr2 38313159 38313220 -212374634 - MER94 DNA DNA -61 73 9 293 307 10 10 chr2 38313598 38313699 -212374155 + MIR3 SINE MIR 96 196 -12 544 281 109 17 chr2 38313702 38313940 -212373914 + MIR SINE MIR 2 261 -1 334 308 0 19 chr2 38314015 38314122 -212373732 - MIR SINE MIR -98 164 60 709 265 26 19 chr2 38314740 38315008 -212372846 - L1ME4a LINE L1 -206 5915 5646 432 0 0 0 chr2 38315401 38315449 -212372405 + (CA)n Simple_repeat Simple_repeat 2 49 0 260 335 133 25 chr2 38315507 38315665 -212372189 - MIR SINE MIR -82 180 6 305 297 8 78 chr2 38315667 38315687 -212372167 + MER5A DNA MER1_type 56 76 -113 2048 128 7 10 chr2 38315687 38315992 -212371862 + AluJb SINE Alu 1 304 -8 305 297 8 78 chr2 38315992 38316099 -212371755 + MER5A DNA MER1_type 76 174 -15 639 286 41 25 chr2 38316380 38316625 -212371229 + MIR SINE MIR 2 250 -12 5340 199 31 45 chr2 38316713 38316975 -212370879 - L1MB8 LINE L1 -6 6172 5908 2636 48 3 0 chr2 38316975 38317285 -212370569 + AluY SINE Alu 1 311 0 5340 199 31 45 chr2 38317285 38317559 -212370295 - L1MB8 LINE L1 -270 5908 5632 2550 71 0 0 chr2 38317559 38317868 -212369986 - AluSc SINE Alu 0 309 1 5340 199 31 45 chr2 38317868 38319656 -212368198 - L1MB8 LINE L1 -546 5632 3876 1422 190 111 2 chr2 38319668 38320073 -212367781 - Charlie2a DNA MER1_type -919 1943 1495 1524 219 74 31 chr2 38321232 38321511 -212366343 + LTR37B LTR ERV1 1 308 -160 1983 118 0 7 chr2 38321511 38321790 -212366064 - AluSx SINE Alu -3 309 33 1524 219 74 31 chr2 38321790 38321957 -212365897 + LTR37B LTR ERV1 308 466 -2 379 289 133 14 chr2 38321959 38322253 -212365601 - L1MB8 LINE L1 -3343 2803 2475 355 332 17 0 chr2 38322249 38322487 -212365367 - L1MEd LINE L1 -3891 2649 2444 * 304 236 60 95 chr2 38322836 38323241 -212364613 - L1MEd LINE L1 -4751 1791 1582 1847 162 13 7 chr2 38323247 38323550 -212364304 - AluSx SINE Alu -5 307 3 499 281 163 7 chr2 38323597 38323750 -212364104 + MER5A DNA MER1_type 13 189 0 933 311 67 55 chr2 38323751 38324085 -212363769 - L1MEd LINE L1 -5003 1527 1198 1780 164 39 7 chr2 38324085 38324366 -212363488 - AluJb SINE Alu -22 290 1 933 311 67 55 chr2 38324366 38325131 -212362723 - L1MEd LINE L1 -5332 1198 415 271 273 91 10 chr2 38325603 38325702 -212362152 + MIR SINE MIR 3 109 -153 2377 80 0 0 chr2 38326023 38326324 -212361530 - AluSc SINE Alu -8 301 1 665 24 0 0 chr2 38326550 38326632 -212361222 - L1PA4 LINE L1 -3 6152 6071 246 230 40 0 chr2 38326978 38327052 -212360802 + Charlie7 DNA MER1_type 2536 2612 0 3611 147 57 9 chr2 38327091 38327725 -212360129 + L1PB3 LINE L1 5489 6152 -2 1655 197 83 12 chr2 38328378 38328810 -212359044 - MLT1C LTR MaLR 0 467 5 23 0 0 0 chr2 38329336 38329359 -212358495 + AT_rich Low_complexity Low_complexity 1 23 0 2129 123 10 0 chr2 38329975 38330277 -212357577 + AluSq SINE Alu 1 305 -8 680 173 15 0 chr2 38331828 38331961 -212355893 + L1PA16 LINE L1 6016 6150 -16 225 0 0 0 chr2 38331968 38331993 -212355861 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 423 285 41 0 chr2 38332249 38332421 -212355433 - L1ME4a LINE L1 -193 5928 5750 407 317 83 19 chr2 38332637 38332842 -212355012 - MIR SINE MIR -10 252 35 1997 157 13 0 chr2 38333141 38333440 -212354414 + AluSx SINE Alu 1 303 -9 621 282 16 55 chr2 38333956 38334211 -212353643 - MIR SINE MIR -3 259 15 186 222 44 78 chr2 38334232 38334322 -212353532 - MIR SINE MIR -110 152 66 2263 155 3 0 chr2 38335293 38335629 -212352225 + MER1B DNA MER1_type 1 337 0 201 196 0 0 chr2 38335683 38335729 -212352125 + T-rich Low_complexity Low_complexity 1 46 0 310 87 0 0 chr2 38335846 38335892 -212351962 - MADE1 DNA Mariner -34 46 1 1619 195 24 0 chr2 38337680 38337800 -212350054 + AluJo SINE Alu 1 117 -195 322 38 19 19 chr2 38337800 38337853 -212350001 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 1619 195 24 0 chr2 38337853 38338019 -212349835 + AluJo SINE Alu 117 294 -18 1062 185 18 5 chr2 38338220 38338442 -212349412 + L1MC2 LINE L1 6112 6336 -8 709 231 18 123 chr2 38338797 38338923 -212348931 - MIR SINE MIR -2 260 177 7574 29 0 0 chr2 38338923 38340199 -212347655 - L1PA4 LINE L1 0 6155 4882 709 231 18 123 chr2 38340199 38340349 -212347505 - MIR SINE MIR -85 177 13 257 333 49 0 chr2 38340758 38340839 -212347015 - L2 LINE L2 -19 3253 3169 1513 138 98 64 chr2 38340984 38341310 -212346544 + MER1B DNA MER1_type 1 337 0 1034 188 0 17 chr2 38341517 38341698 -212346156 + FRAM SINE Alu 1 169 -7 303 250 50 12 chr2 38342267 38342347 -212345507 - L2 LINE L2 -1 3312 3230 1510 151 87 14 chr2 38342358 38342737 -212345117 - LOR1b LTR ERV1 0 461 1 1174 256 84 23 chr2 38342806 38343296 -212344558 - L2 LINE L2 -137 3176 2566 4192 133 16 4 chr2 38343314 38344006 -212343848 - MER50 LTR ERV1 -34 700 1 1452 207 98 19 chr2 38344006 38344031 -212343823 - L2 LINE L2 -745 2569 2547 1978 95 50 21 chr2 38344031 38344314 -212343540 + AluSg SINE Alu 1 291 -19 1452 207 98 19 chr2 38344314 38344698 -212343156 - L2 LINE L2 -767 2547 2128 279 235 59 24 chr2 38344821 38344906 -212342948 - MIR3 SINE MIR -12 196 109 221 57 29 0 chr2 38344954 38344989 -212342865 + (TG)n Simple_repeat Simple_repeat 2 37 0 323 262 68 10 chr2 38345569 38345672 -212342182 - MIR SINE MIR -56 206 98 501 288 201 0 chr2 38345760 38345944 -212341910 + MIR SINE MIR 6 226 -36 2741 148 35 28 chr2 38346277 38346885 -212340969 + MER4B LTR ERV1 1 779 0 1862 122 11 8 chr2 38347197 38347460 -212340394 - AluSx SINE Alu -17 295 32 566 271 24 33 chr2 38347524 38347734 -212340120 + LTR29 LTR ERV1 141 348 -274 550 219 39 5 chr2 38347732 38347944 -212339910 + MER39 LTR ERV1 572 707 0 * 13731 185 26 10 chr2 38348106 38349257 -212338597 - L1PB1 LINE L1 -1 6866 5734 2023 130 7 13 chr2 38349257 38349585 -212338269 - AluSq SINE Alu 0 313 1 13731 185 26 10 chr2 38349585 38353815 -212334039 - L1PB1 LINE L1 -1133 5734 1392 743 221 11 0 chr2 38353812 38354002 -212333852 - L1PB1 LINE L1 -6666 197 6 * 48 0 0 0 chr2 38354497 38354545 -212333309 + AT_rich Low_complexity Low_complexity 1 48 0 550 140 43 0 chr2 38354545 38354638 -212333216 - U6 snRNA snRNA -4 103 7 1347 179 3 103 chr2 38354825 38355137 -212332717 + AluSp SINE Alu 28 308 -5 462 243 78 24 chr2 38355716 38356881 -212330973 + L1ME1 LINE L1 2149 3465 -2681 1414 152 0 27 chr2 38356893 38356927 -212330927 + AluJb SINE Alu 81 114 -198 2044 139 38 6 chr2 38356927 38357271 -212330583 - THE1A LTR MaLR 0 355 1 1414 152 0 27 chr2 38357271 38357460 -212330394 + AluJb SINE Alu 114 298 -14 1656 217 76 31 chr2 38357460 38358143 -212329711 + L1ME1 LINE L1 4628 5341 -805 1930 221 62 22 chr2 38358160 38358738 -212329116 + L1ME1 LINE L1 5560 6160 -6 21 0 0 0 chr2 38358803 38358824 -212329030 + AT_rich Low_complexity Low_complexity 1 21 0 26 23 0 23 chr2 38359170 38359198 -212328656 + AT_rich Low_complexity Low_complexity 1 29 -14 4576 38 6 0 chr2 38359198 38359748 -212328106 - L1PA5 LINE L1 -1 6153 5601 26 23 0 23 chr2 38359748 38359763 -212328091 + AT_rich Low_complexity Low_complexity 29 43 0 354 80 0 0 chr2 38359799 38359849 -212328005 + (TG)n Simple_repeat Simple_repeat 1 50 0 28 48 0 0 chr2 38360029 38360071 -212327783 + AT_rich Low_complexity Low_complexity 1 42 0 678 258 69 127 chr2 38360123 38360480 -212327374 + MER21B LTR ERV1 23 324 -539 1896 183 3 0 chr2 38360480 38360786 -212327068 - AluSx SINE Alu -5 307 1 678 258 69 127 chr2 38360786 38361106 -212326748 + MER21B LTR ERV1 324 661 -202 242 242 33 0 chr2 38362899 38362990 -212324864 + HAL1 LINE L1 1005 1098 -1409 340 247 51 75 chr2 38363160 38363452 -212324402 + L1ME4a LINE L1 5618 5902 -219 383 345 34 20 chr2 38364516 38364664 -212323190 + MIR SINE MIR 2 151 -111 425 269 187 8 chr2 38364812 38364946 -212322908 + MIR3 SINE MIR 30 187 -21 5421 145 25 11 chr2 38365150 38366131 -212321723 - L1MA4 LINE L1 -11 6289 5296 21 57 0 0 chr2 38366286 38366321 -212321533 + GC_rich Low_complexity Low_complexity 1 35 0 24 103 0 0 chr2 38367347 38367434 -212320420 + AT_rich Low_complexity Low_complexity 1 87 0 247 266 64 58 chr2 38367464 38367637 -212320217 - L1ME4a LINE L1 -102 6019 5846 471 216 69 0 chr2 38368256 38368372 -212319482 + MER103 DNA DNA 2 125 -41 180 0 0 0 chr2 38369003 38369023 -212318831 + (A)n Simple_repeat Simple_repeat 1 20 0 1340 205 79 4 chr2 38369482 38369760 -212318094 - AluJo SINE Alu -1 301 3 322 300 23 31 chr2 38369764 38369894 -212317960 - MIR SINE MIR -73 189 61 2151 217 84 11 chr2 38370111 38370573 -212317281 - MER89 LTR ERV1 0 559 53 2062 102 3 3 chr2 38370573 38370857 -212316997 - AluSg1 SINE Alu -25 284 1 2151 217 84 11 chr2 38370857 38370915 -212316939 - MER89 LTR ERV1 -506 53 1 811 162 0 22 chr2 38371145 38371281 -212316573 - FLAM_A SINE Alu 0 133 1 1088 144 21 26 chr2 38371728 38371922 -212315932 + AluJo SINE Alu 109 301 -11 2089 104 0 57 chr2 38372430 38372747 -212315107 - AluSx SINE Alu -13 299 1 24 0 0 0 chr2 38372754 38372778 -212315076 + AT_rich Low_complexity Low_complexity 1 24 0 375 267 151 48 chr2 38372867 38373108 -212314746 + L1ME4a LINE L1 5592 5887 -234 1732 51 0 0 chr2 38373108 38373323 -212314531 - L1PA3 LINE L1 -1 6154 5940 375 267 151 48 chr2 38373323 38373459 -212314395 + L1ME4a LINE L1 5887 6008 -113 214 229 14 14 chr2 38373642 38373712 -212314142 + (TA)n Simple_repeat Simple_repeat 2 71 0 475 316 37 88 chr2 38374209 38374503 -212313351 - L2 LINE L2 -5 3267 2989 255 270 160 0 chr2 38374674 38374774 -212313080 - MIR SINE MIR -59 203 88 1154 258 21 45 chr2 38374777 38375157 -212312697 - MLT1A2 LTR MaLR 0 374 4 381 58 0 0 chr2 38375198 38375250 -212312604 + (TG)n Simple_repeat Simple_repeat 2 53 0 659 268 49 12 chr2 38375800 38375964 -212311890 - MER5B DNA MER1_type -2 176 7 258 277 15 0 chr2 38376244 38376309 -212311545 - L2 LINE L2 0 3313 3248 488 278 23 15 chr2 38376924 38377057 -212310797 + MIR SINE MIR 20 153 -109 487 235 93 37 chr2 38377406 38377438 -212310416 - MIR SINE MIR -43 219 190 1780 136 4 8 chr2 38377438 38377696 -212310158 - AluJb SINE Alu -23 289 33 487 235 93 37 chr2 38377696 38377825 -212310029 - MIR SINE MIR -72 190 49 453 50 0 0 chr2 38379531 38379591 -212308263 + (TG)n Simple_repeat Simple_repeat 1 60 0 652 239 111 114 chr2 38380465 38380783 -212307071 - MLT1G LTR MaLR -285 310 1 4342 225 81 20 chr2 38380946 38383187 -212304667 - L1ME2 LINE L1 -9 6224 3844 325 245 214 47 chr2 38383204 38383396 -212304458 - MLT1F LTR MaLR -130 412 189 221 203 34 0 chr2 38383409 38383468 -212304386 + GA-rich Low_complexity Low_complexity 2 62 0 2272 255 42 33 chr2 38383468 38385441 -212302413 - L1ME2 LINE L1 -2968 3247 1298 1476 281 83 56 chr2 38385444 38386306 -212301548 - L1ME2 LINE L1 -5253 1143 245 2091 151 0 0 chr2 38386306 38386597 -212301257 - AluSx SINE Alu -21 291 1 1476 281 83 56 chr2 38386597 38386794 -212301060 - L1ME2 LINE L1 -6151 245 55 274 171 29 0 chr2 38387627 38387697 -212300157 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 319 286 86 29 chr2 38387777 38387917 -212299937 + MIR SINE MIR 115 262 0 248 70 23 0 chr2 38388077 38388120 -212299734 + (CCCTG)n Simple_repeat Simple_repeat 2 45 0 3100 83 4 20 chr2 38388448 38388905 -212298949 + L1PB1 LINE L1 5701 6150 -1 418 245 46 46 chr2 38389031 38389182 -212298672 + LTR50 LTR ERVL 17 167 -628 688 301 85 22 chr2 38389243 38389562 -212298292 + LTR50 LTR ERVL 344 682 -113 1356 161 8 39 chr2 38389586 38389841 -212298013 + Tigger7 DNA MER2_type 1 247 -2240 548 174 10 0 chr2 38389849 38389947 -212297907 + Tigger7 DNA MER2_type 2489 2587 0 941 103 0 7 chr2 38389987 38390132 -212297722 + (TTCCC)n Simple_repeat Simple_repeat 3 146 0 477 300 51 27 chr2 38390994 38391287 -212296567 + ERVL LTR ERVL 972 1271 -4493 356 243 19 35 chr2 38391313 38391470 -212296384 + MER58B DNA MER1_type 60 341 0 364 237 67 59 chr2 38392816 38392951 -212294903 + L3 LINE CR1 767 902 -675 243 352 29 0 chr2 38393541 38393646 -212294208 - MIR SINE MIR -60 148 41 410 231 0 9 chr2 38395086 38395194 -212292660 - MER103 DNA DNA -58 108 2 206 358 100 42 chr2 38397700 38397890 -212289964 + L2 LINE L2 2558 2758 -556 1598 180 29 0 chr2 38397980 38398289 -212289565 - AluSx SINE Alu 0 317 1 453 281 122 13 chr2 38398389 38398575 -212289279 + L1ME4a LINE L1 5649 5868 -253 6810 124 58 17 chr2 38398575 38399162 -212288692 - Tigger3b DNA MER2_type -1797 1231 669 1802 157 3 38 chr2 38399162 38399480 -212288374 - AluJo SINE Alu -5 307 1 6810 124 58 17 chr2 38399480 38400074 -212287780 - Tigger3b DNA MER2_type -2359 669 2 453 281 122 13 chr2 38400074 38400125 -212287729 + L1ME4a LINE L1 5868 5912 -209 7448 181 28 22 chr2 38400128 38401682 -212286172 + MER52A LTR ERV1 245 1755 0 295 215 8 85 chr2 38401741 38401871 -212285983 + L1ME4a LINE L1 5999 6118 -3 234 213 39 118 chr2 38401904 38402031 -212285823 - L1ME4a LINE L1 -5 6116 6000 294 270 70 104 chr2 38402043 38402398 -212285456 - MLT1I LTR MaLR -26 383 41 1760 154 17 10 chr2 38402526 38402818 -212285036 - AluJb SINE Alu -18 294 1 661 234 77 55 chr2 38402914 38403107 -212284747 - L1ME4a LINE L1 -313 5808 5606 1662 150 54 18 chr2 38403107 38403387 -212284467 - AluJb SINE Alu -22 290 1 661 234 77 55 chr2 38403387 38403466 -212284388 - L1ME4a LINE L1 -515 5606 5530 187 244 141 26 chr2 38403594 38403672 -212284182 + L2 LINE L2 3166 3252 -61 505 136 7 57 chr2 38404199 38404339 -212283515 + (TTCTCC)n Simple_repeat Simple_repeat 3 135 0 404 289 17 33 chr2 38404347 38404527 -212283327 + Charlie8 DNA MER1_type 97 273 -2144 468 250 54 0 chr2 38404914 38405026 -212282828 - L2 LINE L2 -8 3305 3188 2984 246 142 35 chr2 38405040 38406148 -212281706 + L2 LINE L2 1936 3170 -143 1455 227 7 3 chr2 38406148 38406443 -212281411 - AluJo SINE Alu -16 296 1 2984 246 142 35 chr2 38406443 38406543 -212281311 + L2 LINE L2 3170 3258 -55 198 103 0 0 chr2 38406567 38406596 -212281258 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2189 70 42 7 chr2 38406933 38407219 -212280635 + AluSc SINE Alu 1 296 -13 253 332 63 22 chr2 38408766 38408949 -212278905 + MIR SINE MIR 20 212 -50 1357 122 5 0 chr2 38409173 38409370 -212278484 - AluSq SINE Alu -1 312 115 1029 88 22 7 chr2 38409427 38409564 -212278290 - AluSq SINE Alu -173 139 1 332 309 80 11 chr2 38409605 38409851 -212278003 - L1ME3A LINE L1 -214 5939 5669 270 291 187 3 chr2 38409852 38410168 -212277686 - L1ME3A LINE L1 -2171 5620 5247 301 293 107 94 chr2 38410183 38410576 -212277278 - L1ME3A LINE L1 -884 5245 4848 21 0 0 0 chr2 38410587 38410608 -212277246 + AT_rich Low_complexity Low_complexity 1 21 0 8476 184 27 20 chr2 38410706 38412796 -212275058 - L1PA13 LINE L1 -11 6152 4045 7941 11 0 0 chr2 38412796 38414093 -212273761 - L1PA2 LINE L1 0 6155 4859 8476 184 27 20 chr2 38414093 38415039 -212272815 - L1PA13 LINE L1 -2118 4045 3107 4383 111 23 6 chr2 38415069 38415769 -212272085 - L1MA2 LINE L1 -100 6204 5493 2052 264 7 5 chr2 38415754 38416364 -212271490 - L1ME3A LINE L1 -3027 3102 2492 * 300 283 91 36 chr2 38416429 38416838 -212271016 - L1M4 LINE L1 -2582 3564 3096 689 193 7 22 chr2 38416838 38416973 -212270881 - FLAM_A SINE Alu 0 133 1 300 283 91 36 chr2 38416973 38417288 -212270566 - L1M4 LINE L1 -3050 3096 2800 414 311 79 16 chr2 38417421 38417611 -212270243 - L1ME3A LINE L1 -5415 704 503 413 350 154 29 chr2 38417721 38418001 -212269853 - L1ME3A LINE L1 -5758 361 47 483 225 247 17 chr2 38419574 38419752 -212268102 + MIR SINE MIR 43 261 -1 1638 129 102 88 chr2 38422291 38422412 -212265442 + MLT2C2 LTR ERVL 1 119 -345 2077 127 0 35 chr2 38422412 38422728 -212265126 + AluSg SINE Alu 1 305 -5 1638 129 102 88 chr2 38422728 38423016 -212264838 + MLT2C2 LTR ERVL 119 416 -48 290 133 0 50 chr2 38423081 38423141 -212264713 + MLT2C2 LTR ERVL 464 520 0 229 284 32 51 chr2 38423189 38423291 -212264563 - L2 LINE L2 -332 2940 2848 331 284 0 10 chr2 38423984 38424086 -212263768 + LTR67 LTR ERVL 437 537 -20 296 258 41 21 chr2 38524838 38524935 -212162919 - L1MC/D LINE L1 -2179 5629 5531 732 254 43 26 chr2 38524995 38525227 -212162627 - MIR SINE MIR -21 241 6 318 336 77 9 chr2 38525287 38525626 -212162228 + L1M4 LINE L1 4475 4836 -1310 2220 108 7 0 chr2 38525869 38526164 -212161690 + AluSp SINE Alu 1 297 -16 1100 184 17 60 chr2 38526630 38526864 -212160990 + AluJb SINE Alu 87 310 -2 283 257 208 0 chr2 38526869 38526970 -212160884 + MER5A DNA MER1_type 52 173 -16 1924 154 14 14 chr2 38527095 38527451 -212160403 - L1MB8 LINE L1 0 6178 5823 1550 144 84 15 chr2 38527470 38527733 -212160121 + AluSx SINE Alu 1 281 -31 189 0 0 0 chr2 38527736 38527757 -212160097 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2645 122 9 9 chr2 38527760 38528193 -212159661 - L1MA2 LINE L1 -7 6297 5865 798 145 16 75 chr2 38528196 38528382 -212159472 - L1MB8 LINE L1 -348 5830 5656 831 74 0 0 chr2 38528389 38528497 -212159357 - L1PA5 LINE L1 -3 6151 6044 402 204 28 9 chr2 38528507 38528615 -212159239 - L1MB7 LINE L1 -1 6183 6074 2071 113 41 7 chr2 38529080 38529373 -212158481 - AluSc SINE Alu -6 303 1 2061 121 0 16 chr2 38529664 38529970 -212157884 - AluSq SINE Alu -12 301 1 1179 164 29 5 chr2 38530555 38530763 -212157091 + MER20 DNA MER1_type 3 215 -4 716 323 121 11 chr2 38531047 38531630 -212156224 - L2 LINE L2 -14 3299 2639 435 160 0 40 chr2 38531770 38531832 -212156022 + MER39 LTR ERV1 1 59 -648 3411 117 65 11 chr2 38531832 38532373 -212155481 + LTR24B LTR ERV1 1 570 -6 307 139 194 14 chr2 38532372 38532444 -212155410 + LTR48 LTR ERV1 56 140 -647 * 672 106 0 0 chr2 38532595 38532689 -212155165 - AluS SINE Alu -211 102 9 2282 139 113 128 chr2 38532689 38532845 -212155009 + LTR48 LTR ERV1 134 291 -496 2078 146 3 0 chr2 38532845 38533154 -212154700 + AluSx SINE Alu 1 310 -2 2282 139 113 128 chr2 38533154 38533661 -212154193 + LTR48 LTR ERV1 291 787 0 270 271 0 0 chr2 38534479 38534549 -212153305 - MLT1J LTR MaLR -331 180 111 1367 167 8 17 chr2 38535303 38535542 -212152312 + MLT1A1 LTR MaLR 19 255 -110 754 230 95 52 chr2 38535551 38536001 -212151853 + LTR1B LTR ERV1 39 574 -333 623 145 9 62 chr2 38536195 38536312 -212151542 + MLT1A2 LTR MaLR 256 353 -21 2251 118 48 22 chr2 38536312 38536667 -212151187 - THE1B LTR MaLR 0 364 1 623 145 9 62 chr2 38536667 38536688 -212151166 + MLT1A2 LTR MaLR 353 374 0 1720 167 78 0 chr2 38536845 38537127 -212150727 + AluSx SINE Alu 1 304 -8 786 255 102 100 chr2 38537187 38537481 -212150373 - MLT1L LTR MaLR 0 615 217 25 51 0 0 chr2 38539132 38539171 -212148683 + AT_rich Low_complexity Low_complexity 1 39 0 1690 154 64 42 chr2 38539366 38539696 -212148158 + MER1B DNA MER1_type 1 337 0 3382 139 10 33 chr2 38539697 38540273 -212147581 - MER34B LTR ERV1 0 565 3 2082 142 3 0 chr2 38540616 38540926 -212146928 - AluSx SINE Alu -1 311 1 353 254 90 22 chr2 38542326 38542460 -212145394 - MIR3 SINE MIR -17 191 49 972 205 57 91 chr2 38542910 38543392 -212144462 - MER34B LTR ERV1 0 565 93 2740 117 54 5 chr2 38543392 38543802 -212144052 + MER57B LTR ERV1 1 430 -4 972 205 57 91 chr2 38543802 38543848 -212144006 - MER34B LTR ERV1 -472 93 47 440 308 69 12 chr2 38544381 38544628 -212143226 - MIR SINE MIR 0 262 2 235 258 51 30 chr2 38545570 38545674 -212142180 - MER5A DNA MER1_type -53 126 31 249 307 80 34 chr2 38545761 38545937 -212141917 - L1ME3A LINE L1 -9 6161 5978 336 189 113 125 chr2 38545981 38546170 -212141684 - L1ME3A LINE L1 -376 5794 5607 1911 142 0 40 chr2 38546204 38546523 -212141331 - AluJb SINE Alu 0 307 1 877 246 57 17 chr2 38546534 38546911 -212140943 + L1ME LINE L1 5188 5577 -585 1510 241 74 12 chr2 38546935 38547322 -212140532 - MLT2E LTR ERVL -177 451 35 2451 184 42 22 chr2 38547322 38547387 -212140467 - MLT1D LTR MaLR 0 505 443 1862 101 0 63 chr2 38547387 38547673 -212140181 + AluSg SINE Alu 35 302 -8 2451 184 42 22 chr2 38547673 38548102 -212139752 - MLT1D LTR MaLR -62 443 1 1510 241 74 12 chr2 38548102 38548133 -212139721 - MLT2E LTR ERVL -593 35 7 1960 161 3 0 chr2 38548602 38548894 -212138960 + AluJb SINE Alu 1 293 -19 2154 117 0 7 chr2 38549190 38549518 -212138336 - AluSx SINE Alu 0 312 2 276 98 0 0 chr2 38550909 38550950 -212136904 - MADE1 DNA Mariner -4 76 36 320 259 84 7 chr2 38551828 38551971 -212135883 - Charlie7 DNA MER1_type -7 2605 2452 2256 92 14 7 chr2 38551973 38552268 -212135586 + AluSx SINE Alu 1 297 -15 252 366 36 25 chr2 38553230 38553509 -212134345 - L2 LINE L2 -708 2606 2325 400 223 21 0 chr2 38553512 38553606 -212134248 - MER94 DNA DNA 0 134 39 2382 113 0 0 chr2 38553710 38554019 -212133835 + AluSg SINE Alu 1 309 -1 295 133 50 0 chr2 38554587 38554647 -212133207 + L1ME4a LINE L1 6054 6116 -5 242 192 19 0 chr2 38555013 38555065 -212132789 - MER5C DNA MER1_type -201 123 71 232 149 0 21 chr2 38556051 38556098 -212131756 - MIR3 SINE MIR -4 204 159 555 332 70 23 chr2 38556473 38556859 -212130995 + L2 LINE L2 2910 3313 0 209 306 0 0 chr2 38556870 38556932 -212130922 - MIR SINE MIR -40 222 161 734 162 0 132 chr2 38556975 38557172 -212130682 - FRAM SINE Alu -5 171 1 1844 152 28 3 chr2 38557201 38557490 -212130364 + AluSx SINE Alu 1 296 -16 327 130 0 0 chr2 38557916 38557970 -212129884 + (A)n Simple_repeat Simple_repeat 1 54 0 270 255 236 32 chr2 38558525 38558682 -212129172 - MIR SINE MIR -56 206 18 266 318 19 9 chr2 38559346 38559453 -212128401 + MIR SINE MIR 82 189 -73 333 196 52 124 chr2 38560429 38560582 -212127272 + L2 LINE L2 3172 3313 0 933 301 125 18 chr2 38561196 38562229 -212125625 + L2 LINE L2 2005 3145 -168 590 268 106 98 chr2 38562257 38562768 -212125086 - LTR67 LTR ERVL -39 518 4 425 221 71 26 chr2 38562785 38562939 -212124915 + L2 LINE L2 3149 3309 -4 426 20 0 0 chr2 38563563 38563614 -212124240 + (TG)n Simple_repeat Simple_repeat 2 52 0 218 269 30 0 chr2 38564319 38564386 -212123468 + GA-rich Low_complexity Low_complexity 5 73 0 231 209 0 0 chr2 38564878 38564921 -212122933 + (CA)n Simple_repeat Simple_repeat 1 43 0 2241 117 0 7 chr2 38565763 38566072 -212121782 + AluSx SINE Alu 1 307 -5 415 296 105 46 chr2 38566156 38566480 -212121374 - L3 LINE CR1 -34 1543 1201 1763 173 7 13 chr2 38566637 38566943 -212120911 - AluJb SINE Alu -8 304 1 432 344 32 28 chr2 38566974 38567192 -212120662 + LTR67 LTR ERVL 66 284 -273 1366 158 0 21 chr2 38567260 38567494 -212120360 + MLT1D LTR MaLR 8 236 -269 * 1422 197 9 38 chr2 38567488 38567803 -212120051 + MLT1D LTR MaLR 199 504 -1 240 374 22 63 chr2 38568054 38568324 -212119530 + L2 LINE L2 2549 2807 -507 290 279 8 62 chr2 38568442 38568571 -212119283 + MIR SINE MIR 124 245 -17 256 326 75 48 chr2 38568670 38568817 -212119037 + L2 LINE L2 2946 3096 -176 233 241 37 0 chr2 38571013 38571067 -212116787 - L2 LINE L2 -1 3271 3216 183 42 0 0 chr2 38571131 38571155 -212116699 + (TAA)n Simple_repeat Simple_repeat 1 24 0 495 277 39 13 chr2 38571160 38571315 -212116539 - MIR SINE MIR -8 254 96 357 226 130 0 chr2 38571758 38571873 -212115981 - MER119 DNA MER1_type -2 581 452 343 280 21 11 chr2 38571882 38571975 -212115879 - MER119 DNA MER1_type -488 95 2 279 200 65 12 chr2 38572043 38572263 -212115591 + (TA)n Simple_repeat Simple_repeat 1 231 0 344 286 64 49 chr2 38573647 38574041 -212113813 + LTR33A LTR ERVL 66 523 0 268 274 102 88 chr2 38574690 38574975 -212112879 - L2 LINE L2 -461 2853 2565 271 286 134 0 chr2 38576321 38576440 -212111414 - L2 LINE L2 -1 3271 3137 2034 152 58 28 chr2 38576844 38577502 -212110352 + LTR1B LTR ERV1 110 826 0 291 28 0 0 chr2 38579187 38579223 -212108631 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1761 126 87 25 chr2 38579225 38579502 -212108352 - AluSx SINE Alu -18 294 1 23 0 0 0 chr2 38579504 38579527 -212108327 + AT_rich Low_complexity Low_complexity 1 23 0 224 258 169 11 chr2 38581789 38581878 -212105976 + MIR SINE MIR 25 127 -135 611 230 54 71 chr2 38582262 38582501 -212105353 - LTR16A LTR ERVL -13 437 203 232 186 175 72 chr2 38582533 38582630 -212105224 - MIR SINE MIR -110 152 46 2439 73 3 0 chr2 38582824 38583124 -212104730 + AluY SINE Alu 1 301 -10 1787 167 0 25 chr2 38583383 38583700 -212104154 - AluJb SINE Alu -3 309 1 276 311 65 39 chr2 38584800 38585060 -212102794 - L2 LINE L2 -56 3257 2991 2078 120 3 0 chr2 38585456 38585777 -212102077 + AluSx SINE Alu 4 325 0 288 254 0 0 chr2 38586728 38586787 -212101067 - MIR SINE MIR -184 78 20 222 37 0 0 chr2 38588454 38588481 -212099373 + (T)n Simple_repeat Simple_repeat 1 27 0 2925 264 81 24 chr2 38589220 38590042 -212097812 - L2 LINE L2 -833 2481 1586 959 101 17 6 chr2 38590042 38590220 -212097634 + (GA)n Simple_repeat Simple_repeat 1 180 0 2925 264 81 24 chr2 38590220 38590432 -212097422 - L2 LINE L2 -1728 1586 1388 531 234 168 58 chr2 38590538 38590669 -212097185 + L1MEd LINE L1 245 360 -5759 1997 128 0 7 chr2 38590669 38590994 -212096860 + AluSx SINE Alu 2 324 0 531 234 168 58 chr2 38590994 38591135 -212096719 + L1MEd LINE L1 360 548 -5571 325 275 42 78 chr2 38591513 38591706 -212096148 + L1MEd LINE L1 989 1174 -4945 754 132 0 0 chr2 38591717 38591823 -212096031 + AluJo/FLAM SINE Alu 2 107 -205 518 157 11 0 chr2 38591822 38591911 -212095943 + AluJo/FRAM SINE Alu 208 297 -15 * 236 206 132 0 chr2 38591914 38591982 -212095872 + L1MEd LINE L1 1179 1255 -4864 226 220 59 129 chr2 38592017 38592272 -212095582 + HAL1 LINE L1 1403 1639 -868 200 236 18 0 chr2 38593376 38593431 -212094423 - L2 LINE L2 -5 3308 3253 * 613 293 130 9 chr2 38593429 38593753 -212094101 + L2 LINE L2 1256 1618 -1696 1236 272 102 49 chr2 38593753 38593896 -212093958 + L2 LINE L2 2204 2338 -975 1774 179 3 13 chr2 38593896 38594209 -212093645 + AluJb SINE Alu 3 312 0 1236 272 102 49 chr2 38594209 38594925 -212092929 + L2 LINE L2 2338 3104 -209 219 318 24 72 chr2 38595534 38595666 -212092188 - MIR SINE MIR -61 147 18 2265 73 0 11 chr2 38597079 38597410 -212090444 - AluY SINE Alu 0 328 1 234 294 0 15 chr2 38597637 38597705 -212090149 - MIR SINE MIR -117 91 25 2460 76 3 0 chr2 38600199 38600500 -212087354 + AluY SINE Alu 1 302 -9 212 198 93 58 chr2 38600973 38601059 -212086795 - MIR SINE MIR -71 191 103 2172 109 21 0 chr2 38601105 38601388 -212086466 + AluSx SINE Alu 1 289 -23 896 105 126 14 chr2 38601388 38601527 -212086327 + AluSc SINE Alu 138 292 -17 1045 148 127 46 chr2 38601708 38602026 -212085828 + MSTC LTR MaLR 51 428 0 2469 81 0 0 chr2 38602307 38602604 -212085250 - AluSx SINE Alu -13 299 3 207 0 0 0 chr2 38603272 38603295 -212084559 + (CA)n Simple_repeat Simple_repeat 2 24 0 299 313 159 31 chr2 38603452 38603647 -212084207 + L3 LINE CR1 1001 1220 -357 210 250 67 0 chr2 38603769 38603829 -212084025 - MER91C DNA MER1_type -41 99 36 184 319 111 30 chr2 38603857 38603992 -212083862 + L3 LINE CR1 1279 1424 -153 393 345 41 6 chr2 38604143 38604314 -212083540 - MIR SINE MIR -84 178 2 478 239 34 40 chr2 38606458 38606634 -212081220 - MER5B DNA MER1_type -3 175 1 1457 205 23 23 chr2 38607312 38607619 -212080235 - AluJo SINE Alu -5 307 1 202 65 22 43 chr2 38607704 38607750 -212080104 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 414 293 104 27 chr2 38609772 38609841 -212078013 + MIR SINE MIR 3 65 -197 1408 225 139 26 chr2 38609841 38610295 -212077559 + MLT1D LTR MaLR 1 505 0 414 293 104 27 chr2 38610295 38610447 -212077407 + MIR SINE MIR 65 241 -21 292 364 59 0 chr2 38611439 38611675 -212076179 + MIR SINE MIR 10 259 -3 24 0 0 0 chr2 38612570 38612594 -212075260 + AT_rich Low_complexity Low_complexity 1 24 0 2014 149 0 3 chr2 38612939 38613425 -212074429 + AluJb SINE Alu 1 312 0 204 232 71 0 chr2 38613994 38614050 -212073804 - MIR SINE MIR -77 185 126 1101 265 105 58 chr2 38614069 38614642 -212073212 + L1ME4a LINE L1 5383 5982 -139 258 355 36 7 chr2 38615073 38615211 -212072643 - MER5A DNA MER1_type -1 188 47 820 264 20 51 chr2 38615437 38615691 -212072163 - MLT1F1 LTR MaLR 0 567 322 227 284 0 14 chr2 38615737 38615811 -212072043 + GA-rich Low_complexity Low_complexity 2 74 0 371 257 83 33 chr2 38615843 38616006 -212071848 - MLT1E LTR MaLR -365 184 14 1099 165 85 18 chr2 38616536 38616760 -212071094 - MER8 DNA MER2_type 0 239 1 258 239 0 0 chr2 38616760 38616831 -212071023 + (TG)n Simple_repeat Simple_repeat 2 72 0 258 327 77 19 chr2 38617679 38617887 -212069967 + MIR SINE MIR 4 223 -39 280 328 155 0 chr2 38620040 38620156 -212067698 + L2 LINE L2 3134 3267 -5 2653 43 0 0 chr2 38620853 38621153 -212066701 + AluY SINE Alu 1 300 -11 203 343 0 0 chr2 38622143 38622216 -212065638 - MIR SINE MIR -4 258 186 1336 249 29 36 chr2 38622221 38622663 -212065191 - L1ME1 LINE L1 -5 6161 5723 330 324 55 0 chr2 38623940 38624085 -212063769 + MIR SINE MIR 90 242 -20 1630 110 61 4 chr2 38624715 38624960 -212062894 + L1PB4 LINE L1 5531 5789 -367 315 122 0 0 chr2 38624961 38625010 -212062844 + (TA)n Simple_repeat Simple_repeat 2 50 0 2544 141 0 0 chr2 38625010 38625371 -212062483 + L1PB4 LINE L1 5782 6142 -14 207 0 0 0 chr2 38625371 38625394 -212062460 + (TA)n Simple_repeat Simple_repeat 2 24 0 1712 149 0 7 chr2 38625408 38625690 -212062164 - AluY SINE Alu -30 281 2 345 24 0 0 chr2 38625692 38625734 -212062120 + (TA)n Simple_repeat Simple_repeat 2 43 0 2420 96 59 36 chr2 38627766 38628122 -212059732 - THE1B LTR MaLR 0 364 1 726 293 127 30 chr2 38628383 38628848 -212059006 - LTR67 LTR ERVL -7 550 41 4058 169 25 20 chr2 38628848 38629614 -212058240 + L1MB7 LINE L1 5148 5909 -275 2099 153 86 3 chr2 38629614 38629974 -212057880 - MLT1B LTR MaLR 0 390 1 4058 169 25 20 chr2 38629974 38630027 -212057827 + L1MB7 LINE L1 5909 5960 -224 2372 107 54 28 chr2 38630027 38630381 -212057473 - THE1B LTR MaLR -1 363 1 4058 169 25 20 chr2 38630381 38630451 -212057403 + L1MB7 LINE L1 5960 6041 -143 11950 35 1 1 chr2 38630451 38632562 -212055292 + L1PA4 LINE L1 4042 6152 -3 855 130 51 0 chr2 38632562 38632700 -212055154 + L1MB8 LINE L1 6029 6173 -5 768 164 249 4 chr2 38633139 38633395 -212054459 + MER7A DNA MER2_type 1 337 0 200 204 23 0 chr2 38634485 38634529 -212053325 + (TCCA)n Simple_repeat Simple_repeat 4 48 0 2345 192 54 23 chr2 38635440 38635925 -212051929 + MLT1D LTR MaLR 6 505 0 369 43 0 0 chr2 38636690 38636737 -212051117 + (CA)n Simple_repeat Simple_repeat 2 48 0 2286 109 3 0 chr2 38636839 38637141 -212050713 + AluSq SINE Alu 1 303 -10 640 261 116 9 chr2 38638962 38639177 -212048677 - MIR SINE MIR 0 262 25 306 313 173 6 chr2 38639999 38640207 -212047647 - MIR SINE MIR -14 248 8 555 108 0 24 chr2 38642521 38642604 -212045250 + FLAM_C SINE Alu 56 136 -7 822 301 103 30 chr2 38642615 38643014 -212044840 + LTR16B LTR ERVL 37 464 0 2862 117 44 2 chr2 38643767 38644176 -212043678 + MSTB LTR MaLR 1 426 0 1272 63 31 0 chr2 38644342 38644501 -212043353 - L1PA13 LINE L1 0 6163 6000 239 290 0 14 chr2 38644670 38644739 -212043115 - L3 LINE CR1 -15 1562 1495 4958 237 77 24 chr2 38644986 38646448 -212041406 - HAL1 LINE L1 -3 2504 956 2225 150 3 33 chr2 38646448 38646807 -212041047 - MER7A DNA MER2_type 0 346 1 4958 237 77 24 chr2 38646807 38646873 -212040981 - HAL1 LINE L1 -1551 956 895 * 8546 161 43 11 chr2 38646871 38648497 -212039357 + L1 LINE L1 2659 4336 -1810 1161 250 88 0 chr2 38648490 38648762 -212039092 - HAL1 LINE L1 -1616 891 596 * 424 293 227 0 chr2 38648755 38648984 -212038870 - HAL1 LINE L1 -2226 281 1 * 307 339 30 26 chr2 38649129 38649302 -212038552 - MIR SINE MIR -62 146 19 189 286 13 39 chr2 38649507 38649584 -212038270 - L2 LINE L2 -2672 642 568 244 304 120 8 chr2 38650224 38650349 -212037505 - MIR SINE MIR 0 262 124 322 280 83 32 chr2 38650369 38650526 -212037328 + MIR SINE MIR 79 243 -19 932 237 92 100 chr2 38650654 38651195 -212036659 + MLT1H LTR MaLR 13 549 0 464 123 41 0 chr2 38652128 38652201 -212035653 + MADE1 DNA Mariner 1 76 -4 296 262 35 4 chr2 38652598 38652721 -212035133 - MIR SINE MIR -50 212 85 192 77 0 0 chr2 38652761 38652787 -212035067 + (T)n Simple_repeat Simple_repeat 1 26 0 593 198 25 0 chr2 38652941 38653062 -212034792 - MIR SINE MIR -49 213 90 2274 112 3 10 chr2 38653456 38653770 -212034084 + AluSx SINE Alu 1 312 0 696 270 32 5 chr2 38654534 38654719 -212033135 + MLT1I LTR MaLR 214 403 -6 415 286 86 14 chr2 38655585 38655725 -212032129 - MIR SINE MIR -65 197 48 290 327 94 13 chr2 38656432 38656591 -212031263 - L2 LINE L2 0 3272 3101 216 0 0 0 chr2 38658879 38658903 -212028951 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 214 191 21 0 chr2 38659680 38659727 -212028127 + L2 LINE L2 3223 3270 -2 329 353 29 18 chr2 38660670 38660840 -212027014 + MER5A DNA MER1_type 17 188 -1 196 351 0 0 chr2 38661703 38661760 -212026094 + L2 LINE L2 3175 3231 -41 210 266 16 31 chr2 38664282 38664346 -212023508 + MIR3 SINE MIR 143 205 -3 418 265 11 81 chr2 38664394 38664579 -212023275 - MER5B DNA MER1_type 0 178 7 223 304 127 71 chr2 38665328 38665739 -212022115 + L2 LINE L2 2834 3267 -5 2383 101 104 0 chr2 38665847 38666174 -212021680 - THE1B LTR MaLR -3 361 1 2347 102 0 0 chr2 38666451 38666755 -212021099 - AluSq SINE Alu -9 304 1 1405 192 50 90 chr2 38666930 38667409 -212020445 + MLT2C2 LTR ERVL 5 464 0 475 256 58 0 chr2 38669145 38669266 -212018588 - MER94 DNA DNA -5 129 2 915 205 77 17 chr2 38671953 38672187 -212015667 - L1MD3 LINE L1 -17 7978 7731 260 211 0 0 chr2 38672180 38672237 -212015617 - L1MC4a LINE L1 -943 6865 6809 * 963 233 50 50 chr2 38672267 38672670 -212015184 - HAL1b LINE L1 -2 1346 944 897 289 53 21 chr2 38672682 38673100 -212014754 - MLT1H LTR MaLR -8 541 111 331 306 112 31 chr2 38673116 38673312 -212014542 - HAL1b LINE L1 -1033 315 104 514 275 171 39 chr2 38673341 38673640 -212014214 + L2 LINE L2 2960 3299 -9 276 30 0 0 chr2 38673640 38673673 -212014181 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2265 88 7 3 chr2 38673733 38674029 -212013825 - AluSc SINE Alu -12 297 1 567 263 63 17 chr2 38675323 38675498 -212012356 + L2 LINE L2 3082 3264 -49 2108 127 3 13 chr2 38676056 38676363 -212011491 - AluSx SINE Alu -8 304 1 855 279 80 52 chr2 38676544 38676945 -212010909 + L2 LINE L2 2888 3299 -14 356 293 58 7 chr2 38677866 38678004 -212009850 + MIR SINE MIR 10 154 -54 387 229 36 0 chr2 38678166 38678249 -212009605 - MIR SINE MIR -139 123 38 350 170 290 0 chr2 38679490 38679590 -212008264 + L3b LINE CR1 1287 1415 -168 1916 205 17 7 chr2 38680430 38680840 -212007014 + L1M4 LINE L1 3764 4177 -1969 1535 176 101 3 chr2 38680842 38681138 -212006716 - MLT2C2 LTR ERVL -139 325 1 1223 174 18 0 chr2 38681138 38681362 -212006492 + L1M4 LINE L1 4862 5089 -1057 3415 141 28 0 chr2 38681421 38681988 -212005866 - L1MB5 LINE L1 -214 5960 5378 461 131 75 75 chr2 38682059 38682166 -212005688 - Charlie7 DNA MER1_type -918 1694 1588 432 211 184 0 chr2 38682166 38682280 -212005574 + MER5A DNA MER1_type 49 183 -6 462 307 39 0 chr2 38682308 38682461 -212005393 + MIR SINE MIR 102 260 -2 346 205 63 79 chr2 38682508 38682635 -212005219 - MIR SINE MIR -46 216 92 327 98 0 0 chr2 38682674 38682725 -212005129 + MADE1 DNA Mariner 30 80 0 2350 145 13 20 chr2 38683419 38683593 -212004261 + MLT1B LTR MaLR 1 175 -215 1847 160 3 26 chr2 38683593 38683900 -212003954 + AluJb SINE Alu 1 300 -12 2350 145 13 20 chr2 38683900 38684118 -212003736 + MLT1B LTR MaLR 175 390 0 499 296 19 81 chr2 38684118 38684335 -212003519 - MIR SINE MIR -4 258 58 2412 90 0 0 chr2 38684335 38684646 -212003208 - AluY SINE Alu 0 311 1 499 296 19 81 chr2 38684646 38684688 -212003166 - MIR SINE MIR -204 58 15 504 321 118 14 chr2 38685162 38685449 -212002405 - L2 LINE L2 -3 3310 2994 620 269 130 78 chr2 38685509 38685561 -212002293 - L2 LINE L2 -455 2859 2811 3957 194 25 45 chr2 38685561 38686550 -212001304 - LTR5 LTR ERVK 0 969 1 620 269 130 78 chr2 38686550 38686944 -212000910 - L2 LINE L2 -503 2811 2390 233 266 16 0 chr2 38686954 38687018 -212000836 + (TGGG)n Simple_repeat Simple_repeat 3 67 0 603 304 60 30 chr2 38687018 38687317 -212000537 - MLT1J LTR MaLR -99 412 105 262 246 14 0 chr2 38687357 38687426 -212000428 - MLT1L LTR MaLR -540 75 6 589 259 54 5 chr2 38688730 38688915 -211998939 + L3 LINE CR1 1140 1333 -244 364 209 15 0 chr2 38689127 38689194 -211998660 + L2 LINE L2 3198 3265 -7 357 284 89 41 chr2 38689912 38690081 -211997773 - MIR SINE MIR -70 192 16 2341 108 0 0 chr2 38690182 38690479 -211997375 - AluSx SINE Alu -10 302 6 208 333 32 70 chr2 38690812 38690968 -211996886 + MIR SINE MIR 58 207 -55 2612 139 29 2 chr2 38691810 38692227 -211995627 - L1MA5 LINE L1 0 6300 5873 2312 91 0 28 chr2 38692244 38692585 -211995269 + AluSg SINE Alu 1 310 0 252 235 0 0 chr2 38693909 38693977 -211993877 + (CAT)n Simple_repeat Simple_repeat 1 68 0 701 248 95 58 chr2 38693983 38694225 -211993629 - MIR SINE MIR -11 251 1 2291 116 135 5 chr2 38694938 38695317 -211992537 - MSTA LTR MaLR 0 428 1 1490 128 0 14 chr2 38695593 38695812 -211992042 + AluSg/x SINE Alu 81 296 -14 965 114 43 104 chr2 38697180 38697391 -211990463 + THE1C LTR MaLR 178 375 0 768 221 55 20 chr2 38697391 38697590 -211990264 - L1MEc LINE L1 -6154 242 37 1398 231 26 35 chr2 38698169 38698511 -211989343 + MER74A LTR ERVL 5 343 -215 630 212 34 14 chr2 38698511 38698657 -211989197 - L1MEc LINE L1 -5703 693 545 1266 153 22 22 chr2 38698657 38698880 -211988974 + MER74A LTR ERVL 336 558 0 333 230 14 0 chr2 38699334 38699408 -211988446 + MLT1F1 LTR MaLR 5 79 -488 3194 238 34 23 chr2 38699408 38700000 -211987854 - L1MEc LINE L1 -5552 844 239 1932 145 46 40 chr2 38700000 38700373 -211987481 + THE1C LTR MaLR 1 375 0 3194 238 34 23 chr2 38700373 38700577 -211987277 - L1MEc LINE L1 -6157 239 39 1640 193 0 24 chr2 38700589 38700885 -211986969 - AluJo SINE Alu -23 289 1 261 283 42 78 chr2 38703319 38703510 -211984344 + L2 LINE L2 2875 3058 -214 23 0 0 0 chr2 38703541 38703564 -211984290 + AT_rich Low_complexity Low_complexity 1 23 0 217 310 0 35 chr2 38703604 38703662 -211984192 + L2 LINE L2 3191 3246 -26 251 276 58 23 chr2 38705354 38705441 -211982413 - MER91C DNA MER1_type -32 108 19 273 359 56 25 chr2 38706071 38706269 -211981585 - L3b LINE CR1 -116 1467 1264 460 274 36 36 chr2 38706283 38706447 -211981407 - MIR3 SINE MIR -29 179 15 402 57 0 0 chr2 38707216 38707269 -211980585 + (TGG)n Simple_repeat Simple_repeat 1 53 0 459 259 157 12 chr2 38707441 38707607 -211980247 + MIR3 SINE MIR 12 201 -7 423 92 0 0 chr2 38707806 38707871 -211979983 + (TA)n Simple_repeat Simple_repeat 2 66 0 43948 50 4 0 chr2 38707871 38713985 -211973869 - L1PA5 LINE L1 -17 6137 1 266 346 26 43 chr2 38714215 38714446 -211973408 + L2 LINE L2 2868 3094 -178 245 205 188 60 chr2 38714458 38714575 -211973279 - MLT1I LTR MaLR 0 409 278 2005 151 0 7 chr2 38714608 38714906 -211972948 + AluSx SINE Alu 5 300 -12 216 355 182 9 chr2 38715139 38715249 -211972605 + L2 LINE L2 3144 3272 0 417 283 137 24 chr2 38716671 38716883 -211970971 - MIR SINE MIR -12 250 15 196 362 28 91 chr2 38718666 38718953 -211968901 + L2 LINE L2 2995 3263 -9 963 190 11 16 chr2 38719018 38719202 -211968652 - MER5A DNA MER1_type 0 189 7 533 224 63 0 chr2 38719219 38719362 -211968492 + MER104 DNA Tc2 29 180 0 698 207 93 81 chr2 38719409 38719655 -211968199 + MLT1A1 LTR MaLR 117 365 0 7155 251 72 46 chr2 38719864 38723476 -211964378 + L1ME2 LINE L1 1387 5435 -780 1430 180 35 8 chr2 38723477 38723733 -211964121 + Tigger7 DNA MER2_type 2 264 -469 463 223 0 0 chr2 38723737 38723831 -211964023 + Tigger7 DNA MER2_type 2392 2485 -2 2015 208 20 4 chr2 38723833 38724285 -211963569 + L1ME2 LINE L1 5430 5888 -345 453 206 49 80 chr2 38724297 38724339 -211963515 + L1ME2 LINE L1 5861 5903 -330 2493 83 3 0 chr2 38724339 38724651 -211963203 + AluSp SINE Alu 1 313 0 453 206 49 80 chr2 38724651 38724918 -211962936 + L1ME2 LINE L1 5903 6227 -6 191 343 45 0 chr2 38724975 38725042 -211962812 - L2 LINE L2 -1 3271 3202 1244 206 17 38 chr2 38725917 38726209 -211961645 - MLT1D LTR MaLR -218 287 2 181 71 0 143 chr2 38726242 38726284 -211961570 - MIR SINE MIR 0 262 227 233 209 209 55 chr2 38726419 38726529 -211961325 - MIR SINE MIR -120 142 16 279 303 70 21 chr2 38727872 38728014 -211959840 + L2 LINE L2 2588 2736 -578 348 318 48 79 chr2 38728060 38728326 -211959528 + L2 LINE L2 2723 2965 -348 333 0 0 0 chr2 38728326 38728363 -211959491 + (CA)n Simple_repeat Simple_repeat 2 38 0 348 318 48 79 chr2 38728363 38728459 -211959395 + L2 LINE L2 2965 3062 -251 216 328 31 0 chr2 38728494 38728558 -211959296 + L2 LINE L2 3248 3313 0 1575 181 27 24 chr2 38729225 38729523 -211958331 + AluJb SINE Alu 1 299 -13 206 359 23 23 chr2 38729912 38730043 -211957811 - MIR SINE MIR -96 166 36 828 254 198 8 chr2 38730601 38730975 -211956879 + MLT1H LTR MaLR 76 520 -29 299 67 44 0 chr2 38730976 38731021 -211956833 - MADE1 DNA Mariner 0 80 34 297 310 121 0 chr2 38731187 38731303 -211956551 - L2 LINE L2 -10 3262 3133 315 320 99 41 chr2 38731630 38731802 -211956052 + MIR3 SINE MIR 18 199 -9 13815 178 7 11 chr2 38732244 38735914 -211951940 + L1PB1 LINE L1 2496 6146 -5 1116 121 6 0 chr2 38735921 38736087 -211951767 + MER2 DNA MER2_type 83 249 -96 234 0 0 0 chr2 38736087 38736113 -211951741 + (TAAAA)n Simple_repeat Simple_repeat 1 26 0 450 307 42 34 chr2 38736765 38737003 -211950851 + L2 LINE L2 168 407 -2907 407 350 91 45 chr2 38737019 38737932 -211949922 + L2 LINE L2 2307 3261 -11 2583 45 0 16 chr2 38738782 38739095 -211948759 + AluY SINE Alu 1 308 -3 863 223 47 10 chr2 38739373 38739566 -211948288 + L1MDa LINE L1 150 349 -6191 * 3712 226 36 3 chr2 38739562 38740516 -211947338 + L1M4 LINE L1 4363 5347 -799 22 56 0 0 chr2 38741110 38741146 -211946708 + AT_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr2 38742231 38742265 -211945589 + AT_rich Low_complexity Low_complexity 1 34 0 1248 153 28 5 chr2 38742427 38742643 -211945211 - AluJb SINE Alu -6 306 86 2230 102 7 7 chr2 38742651 38742954 -211944900 - AluSg SINE Alu -7 303 1 7763 42 1 2 chr2 38744734 38746342 -211941512 - L1PA4 LINE L1 0 6155 4550 265 230 46 35 chr2 38746342 38746429 -211941425 + MIR SINE MIR 76 163 -99 287 238 250 48 chr2 38748628 38748777 -211939077 - L2 LINE L2 -229 3043 2925 2923 84 19 3 chr2 38748777 38749146 -211938708 + THE1C LTR MaLR 1 375 0 287 238 250 48 chr2 38749146 38749259 -211938595 - L2 LINE L2 -347 2925 2747 217 329 44 76 chr2 38749471 38749629 -211938225 + L2 LINE L2 3116 3268 -4 25 31 0 0 chr2 38750326 38750358 -211937496 + AT_rich Low_complexity Low_complexity 1 32 0 8638 176 80 44 chr2 38750445 38751063 -211936791 - L1MC3 LINE L1 0 7995 7401 805 189 7 7 chr2 38751063 38751211 -211936643 - FRAM SINE Alu -7 169 22 8638 176 80 44 chr2 38751211 38752930 -211934924 - L1MC3 LINE L1 -594 7401 5433 2122 182 101 22 chr2 38753376 38753882 -211933972 - MER74A LTR ERVL -12 546 1 465 246 39 78 chr2 38754491 38754670 -211933184 - MIR SINE MIR -71 191 20 502 277 8 23 chr2 38754801 38754931 -211932923 + MIR3 SINE MIR 66 193 -15 244 139 0 0 chr2 38755466 38755502 -211932352 - MLT1B LTR MaLR -2 388 353 1803 147 41 26 chr2 38755565 38755905 -211931949 - MLT1B LTR MaLR -41 349 5 3209 164 12 37 chr2 38756160 38756757 -211931097 + L1MC1 LINE L1 5751 6332 -1 1945 174 52 6 chr2 38757678 38758023 -211929831 - MLT1A1 LTR MaLR -1 364 4 23 0 0 0 chr2 38758346 38758369 -211929485 + AT_rich Low_complexity Low_complexity 1 23 0 214 303 40 40 chr2 38758440 38758516 -211929338 + L2 LINE L2 3191 3266 -6 1818 119 83 7 chr2 38759647 38759924 -211927930 - AluSg1 SINE Alu -11 298 1 191 192 211 19 chr2 38760227 38760279 -211927575 - L2 LINE L2 -5 3308 3247 1087 253 52 30 chr2 38760287 38760651 -211927203 - L2 LINE L2 0 3313 2942 239 35 0 0 chr2 38760661 38760690 -211927164 + L1MA9 LINE L1 6284 6312 0 747 263 240 20 chr2 38761726 38762118 -211925736 - L2 LINE L2 -2 3311 2834 189 111 0 28 chr2 38762717 38762753 -211925101 - MER5A DNA MER1_type -142 47 13 640 103 35 0 chr2 38763209 38763296 -211924558 + AluJ/FLAM SINE Alu 5 94 -218 414 132 0 0 chr2 38763312 38763388 -211924466 + (GGGGA)n Simple_repeat Simple_repeat 2 77 0 32 26 0 0 chr2 38763842 38763881 -211923973 + AT_rich Low_complexity Low_complexity 1 39 0 27 49 0 0 chr2 38764568 38764609 -211923245 + GC_rich Low_complexity Low_complexity 1 41 0 25 0 0 0 chr2 38765312 38765337 -211922517 + GC_rich Low_complexity Low_complexity 1 25 0 194 81 27 0 chr2 38765423 38765460 -211922394 + (CCCCG)n Simple_repeat Simple_repeat 1 38 0 22 0 0 0 chr2 38766637 38766659 -211921195 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr2 38767887 38767908 -211919946 + (T)n Simple_repeat Simple_repeat 1 21 0 204 40 0 0 chr2 38768018 38768043 -211919811 + (TTA)n Simple_repeat Simple_repeat 2 26 0 472 323 30 0 chr2 38768314 38768478 -211919376 - MIR SINE MIR -20 242 74 748 212 127 0 chr2 38768604 38768793 -211919061 + MIR SINE MIR 36 248 -14 567 248 35 7 chr2 38768851 38768890 -211918964 - MIR SINE MIR -71 191 155 1740 160 108 7 chr2 38768890 38769197 -211918657 + MER44D DNA MER2_type 1 608 -1 567 248 35 7 chr2 38769197 38769298 -211918556 - MIR SINE MIR -107 155 47 391 214 58 10 chr2 38770798 38770901 -211916953 + MER103 DNA DNA 52 159 -7 207 319 168 9 chr2 38771158 38771271 -211916583 + MIR3 SINE MIR 54 184 -24 507 137 0 0 chr2 38772003 38772076 -211915778 - MLT2A2 LTR ERVL -44 409 337 2017 133 10 0 chr2 38772080 38772382 -211915472 - L1PA13 LINE L1 -19 6144 5840 189 321 38 0 chr2 38772388 38772441 -211915413 + L2 LINE L2 3132 3186 -86 2049 155 45 62 chr2 38772581 38772946 -211914908 - MLT2A2 LTR ERVL 0 554 194 2243 79 0 0 chr2 38772946 38773249 -211914605 - AluY SINE Alu 0 303 1 2049 155 45 62 chr2 38773249 38773440 -211914414 - MLT2A2 LTR ERVL -360 194 1 338 235 0 0 chr2 38773816 38773884 -211913970 + L2 LINE L2 3235 3302 -11 2056 108 0 11 chr2 38773931 38774259 -211913595 - AluSq SINE Alu 0 325 1 248 240 120 30 chr2 38775099 38775199 -211912655 - MIR3 SINE MIR 0 208 100 322 303 61 65 chr2 38775508 38775739 -211912115 - L3 LINE CR1 -694 883 654 286 77 0 39 chr2 38775981 38775992 -211911862 + (CA)n Simple_repeat Simple_repeat 1 60 0 286 77 0 39 chr2 38775992 38776044 -211911810 + (CA)n Simple_repeat Simple_repeat 2 51 0 232 192 39 39 chr2 38778656 38778734 -211909120 - MER5C DNA MER1_type 0 324 247 258 152 165 25 chr2 38778878 38778957 -211908897 - MER5C DNA MER1_type -229 95 6 1052 170 39 61 chr2 38779086 38779204 -211908650 - MER58A DNA MER1_type -2196 224 112 1251 170 9 14 chr2 38779204 38779422 -211908432 - MER20 DNA MER1_type -2 217 1 1052 170 39 61 chr2 38779422 38779532 -211908322 - MER58A DNA MER1_type -2308 112 1 21 36 0 0 chr2 38780135 38780163 -211907691 + GC_rich Low_complexity Low_complexity 1 28 0 303 270 185 57 chr2 38782602 38782954 -211904900 - L3 LINE CR1 -159 1418 1022 1502 154 7 40 chr2 38784268 38784541 -211903313 + AluJo SINE Alu 1 264 -48 2651 58 0 0 chr2 38784937 38785248 -211902606 - AluY SINE Alu 0 311 1 777 303 88 12 chr2 38785977 38786386 -211901468 - L1MC4a LINE L1 -1902 5906 5467 299 296 105 17 chr2 38786497 38786669 -211901185 + MIR SINE MIR 63 249 -13 1639 192 29 13 chr2 38787666 38787973 -211899881 - AluJo SINE Alu 0 312 1 469 136 0 37 chr2 38787973 38788046 -211899808 - FLAM_C SINE Alu -182 130 59 26 0 0 0 chr2 38788047 38788073 -211899781 + AT_rich Low_complexity Low_complexity 1 26 0 805 233 141 31 chr2 38789073 38789522 -211898332 - MLT1E LTR MaLR 0 593 1 21 36 0 0 chr2 38791942 38791970 -211895884 + AT_rich Low_complexity Low_complexity 1 28 0 1015 98 164 89 chr2 38793025 38793239 -211894615 + MER30 DNA MER1_type 1 230 0 2144 118 14 0 chr2 38796127 38796414 -211891440 - AluSx SINE Alu -21 291 1 2057 70 0 8 chr2 38796422 38796680 -211891174 - AluY SINE Alu -9 302 47 478 123 25 12 chr2 38797152 38797233 -211890621 + Tigger5 DNA MER2_type 2242 2323 0 21 0 0 0 chr2 38798517 38798538 -211889316 + AT_rich Low_complexity Low_complexity 1 21 0 1969 209 82 15 chr2 38799132 38799605 -211888249 + MLT1D LTR MaLR 1 505 0 1884 189 54 16 chr2 38799660 38800031 -211887823 + MLT1B LTR MaLR 6 390 0 2391 124 36 3 chr2 38801199 38801562 -211886292 + THE1C LTR MaLR 1 375 0 497 313 161 20 chr2 38801816 38802580 -211885274 + L2 LINE L2 1778 2649 -665 28 48 0 0 chr2 38802629 38802671 -211885183 + AT_rich Low_complexity Low_complexity 1 42 0 2417 108 19 29 chr2 38802939 38803318 -211884536 - THE1C LTR MaLR 0 375 1 237 235 0 44 chr2 38805918 38805986 -211881868 + (TG)n Simple_repeat Simple_repeat 2 66 0 424 283 38 0 chr2 38807870 38807976 -211879878 - MIR SINE MIR -132 130 21 216 303 13 13 chr2 38807996 38808072 -211879782 + MIR SINE MIR 20 95 -167 1159 209 38 0 chr2 38808114 38808325 -211879529 - MER58A DNA MER1_type 0 224 6 313 250 54 82 chr2 38809038 38809222 -211878632 + MLT1K LTR MaLR 363 541 -47 246 289 125 10 chr2 38809941 38810045 -211877809 + MIR SINE MIR 91 206 -56 439 159 0 34 chr2 38813367 38813455 -211874399 - MLT1A2-int LTR MaLR -1562 89 5 500 114 13 0 chr2 38813459 38813538 -211874316 - MLT1A2 LTR MaLR 0 428 349 * 620 202 81 90 chr2 38813521 38813744 -211874110 - MLT1A2 LTR MaLR -153 221 1 859 201 6 35 chr2 38813996 38814170 -211873684 - MER45A DNA AcHobo -7 171 3 184 255 64 0 chr2 38815725 38815772 -211872082 - L2 LINE L2 0 3272 3223 250 343 20 10 chr2 38816269 38816368 -211871486 - MIR SINE MIR -59 149 50 227 304 143 0 chr2 38816475 38816587 -211871267 + MIR SINE MIR 4 131 -131 25 0 0 0 chr2 38816734 38816759 -211871095 + AT_rich Low_complexity Low_complexity 1 25 0 392 222 83 35 chr2 38818353 38818497 -211869357 + MIR SINE MIR 112 262 0 333 238 101 60 chr2 38818513 38818765 -211869089 + MLT1H LTR MaLR 7 300 -249 555 260 117 26 chr2 38819009 38819240 -211868614 + MIR SINE MIR 11 262 0 2382 113 13 26 chr2 38819628 38820007 -211867847 - THE1C LTR MaLR -1 374 1 192 40 0 0 chr2 38823478 38823503 -211864351 + (CA)n Simple_repeat Simple_repeat 1 25 0 348 197 30 15 chr2 38823503 38823635 -211864219 + (TA)n Simple_repeat Simple_repeat 1 134 0 342 45 0 0 chr2 38823660 38823704 -211864150 + (CA)n Simple_repeat Simple_repeat 2 45 0 665 248 111 4 chr2 38825049 38825275 -211862579 - MIR SINE MIR -5 257 8 1063 164 11 16 chr2 38825275 38825464 -211862390 - MER5A DNA MER1_type -1 188 1 233 282 24 24 chr2 38825522 38825607 -211862247 - MER5B DNA MER1_type -93 85 1 516 196 62 67 chr2 38825620 38825799 -211862055 - MER5B DNA MER1_type 0 178 1 3148 115 25 25 chr2 38826642 38826969 -211860885 - L1MA9 LINE L1 0 6312 5983 909 271 139 13 chr2 38826969 38827286 -211860568 - LTR18A LTR ERVL 0 357 1 3148 115 25 25 chr2 38827286 38827488 -211860366 - L1MA9 LINE L1 -328 5984 5783 222 171 0 0 chr2 38827488 38827529 -211860325 + (TATATG)n Simple_repeat Simple_repeat 3 43 0 295 187 0 27 chr2 38827558 38827633 -211860221 - L1M3 LINE L1 -541 6029 5957 * 2046 152 18 23 chr2 38827622 38828018 -211859836 - L1M3 LINE L1 -766 5616 5223 3279 137 8 29 chr2 38828025 38828655 -211859199 - L1M3 LINE L1 -2111 4271 3655 1173 238 70 57 chr2 38828663 38829421 -211858433 - L1M3 LINE L1 -3580 2802 2027 355 188 0 14 chr2 38829449 38829518 -211858336 + Tigger2 DNA MER2_type 2 69 -2649 * 2422 131 61 19 chr2 38829508 38829936 -211857918 + Tigger2 DNA MER2_type 2273 2718 0 277 270 56 11 chr2 38830062 38830151 -211857703 - MER5A DNA MER1_type -1 188 96 * 378 176 15 0 chr2 38830084 38830152 -211857702 + MER5A DNA MER1_type 37 105 -84 2900 225 56 18 chr2 38830521 38831707 -211856147 - L1M2 LINE L1 -4168 2043 851 898 239 30 83 chr2 38831715 38832101 -211855753 - MLT1A1 LTR MaLR 0 365 1 2614 265 36 32 chr2 38832101 38832736 -211855118 - L1M2 LINE L1 -5337 804 164 239 0 32 0 chr2 38832736 38832767 -211855087 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2614 265 36 32 chr2 38832767 38832930 -211854924 - L1M2 LINE L1 -5977 164 3 484 173 19 0 chr2 38833155 38833259 -211854595 + MER53 DNA DNA 1 106 -83 213 360 73 0 chr2 38833644 38833780 -211854074 - L2 LINE L2 -740 2574 2429 396 0 0 0 chr2 38833838 38833882 -211853972 + (TG)n Simple_repeat Simple_repeat 2 45 0 230 253 136 19 chr2 38834334 38834488 -211853366 + L1MCc LINE L1 1291 1462 -4961 355 242 24 32 chr2 38834630 38834754 -211853100 + L1ME1 LINE L1 6037 6159 -7 180 179 0 0 chr2 38834920 38834959 -211852895 + CT-rich Low_complexity Low_complexity 2 40 0 36265 86 9 8 chr2 38836817 38842944 -211844910 + L1PA6 LINE L1 11 6138 -16 205 190 1 19 chr2 38842950 38843011 -211844843 + A-rich Low_complexity Low_complexity 2 44 0 356 257 105 51 chr2 38843202 38843381 -211844473 + HAL1b LINE L1 76 244 -1104 2215 99 24 0 chr2 38843381 38843674 -211844180 + AluSc SINE Alu 1 300 -9 356 257 105 51 chr2 38843674 38844344 -211843510 + HAL1b LINE L1 244 1032 -316 2315 103 0 6 chr2 38844344 38844656 -211843198 - AluSg SINE Alu 0 310 1 356 257 105 51 chr2 38844656 38844798 -211843056 + HAL1b LINE L1 1032 1165 -183 2382 146 17 15 chr2 38844833 38844853 -211843001 - MSTB1 LTR MaLR -12 420 402 234 81 0 0 chr2 38844853 38844890 -211842964 + (TA)n Simple_repeat Simple_repeat 2 38 0 2382 146 17 15 chr2 38844890 38845274 -211842580 - MSTB1 LTR MaLR -30 402 15 248 278 28 37 chr2 38845274 38845382 -211842472 + HAL1b LINE L1 1192 1298 -50 726 186 0 8 chr2 38845421 38845545 -211842309 - FLAM_C SINE Alu -20 123 1 273 98 0 0 chr2 38847067 38847108 -211840746 + (TC)n Simple_repeat Simple_repeat 2 42 0 23 33 0 0 chr2 38847203 38847233 -211840621 + AT_rich Low_complexity Low_complexity 1 30 0 767 219 135 21 chr2 38847611 38847848 -211840006 - MER58 DNA MER1_type -2150 270 7 215 268 85 24 chr2 38847959 38848041 -211839813 - MIR SINE MIR -76 186 100 490 318 99 67 chr2 38848044 38848646 -211839208 - L2 LINE L2 -1 3271 2652 225 341 59 15 chr2 38848616 38848751 -211839103 - MIR3 SINE MIR -23 185 45 * 1551 175 36 39 chr2 38849134 38849443 -211838411 + AluJo SINE Alu 1 308 -4 1062 160 5 0 chr2 38849580 38849767 -211838087 - MER2 DNA MER2_type -135 210 23 412 173 0 0 chr2 38851064 38851139 -211836715 + L1MA9 LINE L1 6200 6274 -38 1118 265 22 34 chr2 38851184 38851596 -211836258 + LTR16B LTR ERVL 44 450 -14 492 32 0 0 chr2 38851904 38851966 -211835888 + (TG)n Simple_repeat Simple_repeat 2 63 0 22 0 0 0 chr2 38852485 38852507 -211835347 + AT_rich Low_complexity Low_complexity 1 22 0 345 161 35 0 chr2 38852652 38852739 -211835115 + CT-rich Low_complexity Low_complexity 2 91 0 189 147 0 0 chr2 38853501 38853535 -211834319 + (CA)n Simple_repeat Simple_repeat 2 35 0 1127 181 11 26 chr2 38853555 38853826 -211834028 + L1MC3 LINE L1 7494 7760 -25 22 35 0 0 chr2 38854892 38854921 -211832933 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr2 38855011 38855048 -211832806 + AT_rich Low_complexity Low_complexity 1 37 0 617 293 76 41 chr2 38855169 38855606 -211832248 + MLT1J2 LTR MaLR 4 409 0 2108 113 19 49 chr2 38856886 38857256 -211830598 - THE1B LTR MaLR -5 359 1 280 262 69 69 chr2 38857423 38857568 -211830286 + MIR SINE MIR 47 191 -71 2183 146 29 0 chr2 38857890 38858240 -211829614 + MLT1A1 LTR MaLR 5 364 -1 1025 155 0 0 chr2 38860209 38860364 -211827490 - FRAM SINE Alu -11 165 11 326 197 151 92 chr2 38860485 38860553 -211827301 - LTR16A1 LTR ERVL -2 455 392 3914 89 15 0 chr2 38860553 38861092 -211826762 + L1PA14 LINE L1 5606 6152 -9 326 197 151 92 chr2 38861092 38861262 -211826592 - LTR16A1 LTR ERVL -65 392 203 2154 117 0 0 chr2 38861468 38861758 -211826096 + AluSg SINE Alu 3 292 -18 2009 91 4 0 chr2 38861840 38862094 -211825760 + AluSc SINE Alu 40 294 -15 1674 178 7 7 chr2 38862316 38862602 -211825252 - AluSx SINE Alu -26 286 1 202 250 36 0 chr2 38863006 38863062 -211824792 + (CATA)n Simple_repeat Simple_repeat 3 60 0 399 286 33 0 chr2 38863063 38863154 -211824700 - MIR SINE MIR -79 129 36 235 244 26 64 chr2 38863509 38863587 -211824267 - MIR3 SINE MIR -1 207 133 598 325 16 11 chr2 38863730 38863921 -211823933 - MIR SINE MIR -50 212 21 1127 276 42 47 chr2 38864084 38864284 -211823570 - L2 LINE L2 -14 3299 3100 279 0 0 0 chr2 38864284 38864315 -211823539 + (TG)n Simple_repeat Simple_repeat 1 31 0 1127 276 42 47 chr2 38864315 38864542 -211823312 - L2 LINE L2 -213 3100 2874 248 211 0 0 chr2 38864962 38865014 -211822840 - MIR3 SINE MIR -48 160 109 201 329 110 27 chr2 38865421 38865567 -211822287 + L2 LINE L2 2933 3090 -182 1091 226 10 48 chr2 38917662 38917972 -211769882 + AluSx SINE Alu 5 302 0 2142 89 30 7 chr2 38918266 38918569 -211769285 - AluSx SINE Alu -2 310 1 583 143 71 29 chr2 38920494 38920634 -211767220 - MER104 DNA Tc2 -3 177 32 2705 78 120 0 chr2 38920674 38921074 -211766780 - LTR7 LTR ERV1 -2 448 1 2219 113 50 18 chr2 38921074 38921454 -211766400 - HERVH LTR ERV1 0 7713 7322 1398 134 18 5 chr2 38921452 38921669 -211766185 - HERVH LTR ERV1 -1894 5819 5600 * 4512 136 1 3 chr2 38921670 38922333 -211765521 - HERVH LTR ERV1 -2564 5149 4488 3558 95 4 6 chr2 38922335 38922838 -211765016 - HERVH LTR ERV1 -3720 3993 3492 900 142 20 0 chr2 38922828 38922976 -211764878 - HERVH LTR ERV1 -4423 3290 3140 * 20821 90 14 25 chr2 38922970 38925989 -211761865 - HERVH LTR ERV1 -4726 2987 1 2613 91 126 0 chr2 38925991 38926389 -211761465 - LTR7 LTR ERV1 -2 448 1 559 176 101 91 chr2 38926764 38926963 -211760891 + L1MC4 LINE L1 7842 8042 0 241 323 10 35 chr2 38927440 38927624 -211760230 + CT-rich Low_complexity Low_complexity 1 179 0 2024 130 13 0 chr2 38927992 38928300 -211759554 - AluSx SINE Alu 0 312 1 663 123 0 0 chr2 38928621 38928743 -211759111 + (TC)n Simple_repeat Simple_repeat 1 122 0 693 318 147 49 chr2 38929042 38929636 -211758218 - L3 LINE CR1 -174 1403 752 325 310 100 53 chr2 38929986 38930048 -211757806 - L1MC4a LINE L1 -1961 5847 5789 181 111 0 0 chr2 38930048 38930075 -211757779 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1877 132 11 7 chr2 38930075 38930356 -211757498 - AluJb SINE Alu -30 282 1 325 310 100 53 chr2 38930356 38930592 -211757262 - L1MC4a LINE L1 -2018 5790 5534 742 282 39 20 chr2 38931002 38931257 -211756597 + MIR SINE MIR 2 261 -1 611 290 40 52 chr2 38931465 38931717 -211756137 + MIR SINE MIR 13 261 -1 807 86 0 0 chr2 38932875 38932980 -211754874 - FLAM_A SINE Alu -5 137 33 510 330 24 15 chr2 38933185 38933391 -211754463 - MIR SINE MIR -29 233 26 1775 197 133 25 chr2 38933923 38934395 -211753459 - Charlie1b DNA MER1_type 0 523 1 2448 47 0 7 chr2 38934420 38934718 -211753136 + AluY SINE Alu 1 296 -15 198 0 0 0 chr2 38934734 38934756 -211753098 + (TG)n Simple_repeat Simple_repeat 1 22 0 545 305 38 30 chr2 38935272 38935508 -211752346 - MIR SINE MIR -2 260 23 193 313 52 31 chr2 38936725 38936821 -211751033 + MIR SINE MIR 47 144 -118 668 267 37 0 chr2 38936874 38937035 -211750819 + MIR3 SINE MIR 30 196 -12 26 30 0 0 chr2 38937062 38937095 -211750759 + AT_rich Low_complexity Low_complexity 1 33 0 369 0 0 0 chr2 38939398 38939439 -211748415 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 293 0 0 26 chr2 38939856 38939894 -211747960 + (GAAA)n Simple_repeat Simple_repeat 2 38 0 201 108 0 0 chr2 38940018 38940055 -211747799 + (T)n Simple_repeat Simple_repeat 1 37 0 479 354 134 15 chr2 38940306 38940716 -211747138 + L2 LINE L2 2855 3313 0 310 332 66 53 chr2 38940883 38941184 -211746670 - L2 LINE L2 -1802 1512 1208 786 259 79 27 chr2 38941257 38941624 -211746230 + L1ME4a LINE L1 5615 6000 -121 4693 167 30 3 chr2 38941714 38942578 -211745276 - L1PA13 LINE L1 -992 5154 4268 6671 103 11 0 chr2 38942578 38943593 -211744261 + L1PA13 LINE L1 5141 6163 0 420 295 31 106 chr2 38943911 38943983 -211743871 - MIR SINE MIR -6 256 180 2394 91 3 0 chr2 38943983 38944292 -211743562 + AluY SINE Alu 1 310 -1 420 295 31 106 chr2 38944292 38944446 -211743408 - MIR SINE MIR -82 180 47 1920 183 86 3 chr2 38945169 38945529 -211742325 + MLT1B LTR MaLR 1 390 0 693 247 172 62 chr2 38945533 38945906 -211741948 - LTR16A LTR ERVL -12 438 25 1380 174 68 95 chr2 38947010 38947225 -211740629 + LTR9 LTR ERV1 3 205 -407 2308 84 6 40 chr2 38947225 38947266 -211740588 - AluSg SINE Alu 0 310 269 180 77 0 0 chr2 38947266 38947292 -211740562 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2308 84 6 40 chr2 38947292 38947571 -211740283 - AluSg SINE Alu -41 269 1 1380 174 68 95 chr2 38947571 38947723 -211740131 + LTR9 LTR ERV1 205 360 -252 3864 110 23 5 chr2 38947886 38948448 -211739406 - MER41B LTR ERV1 -63 572 1 601 234 86 6 chr2 38949011 38949186 -211738668 + LTR37B LTR ERV1 3 191 -277 559 183 39 0 chr2 38949197 38949301 -211738553 + MER20 DNA MER1_type 112 219 0 475 254 163 29 chr2 38952096 38952305 -211735549 + MIR SINE MIR 16 252 -10 231 193 211 0 chr2 38953776 38953833 -211734021 - L2 LINE L2 -14 3299 3231 1994 141 7 0 chr2 38954133 38954431 -211733423 - AluSx SINE Alu -12 300 1 2162 72 31 7 chr2 38954757 38955048 -211732806 - AluSx SINE Alu -14 298 1 26 30 0 0 chr2 38956321 38956354 -211731500 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr2 38956660 38956682 -211731172 + AT_rich Low_complexity Low_complexity 1 22 0 1647 162 32 0 chr2 38957031 38957315 -211730539 + AluJo SINE Alu 1 293 -19 374 207 69 11 chr2 38957685 38957772 -211730082 + MIR SINE MIR 71 162 -100 1075 244 46 37 chr2 38958859 38959207 -211728647 + L2 LINE L2 1347 1697 -1617 798 179 114 46 chr2 38959247 38959527 -211728327 - L1MEc LINE L1 -4182 2214 1916 971 154 5 77 chr2 38960436 38960644 -211727210 + MER3 DNA MER1_type 6 198 -11 260 26 0 26 chr2 38962417 38962455 -211725399 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 9716 24 3 209 chr2 38962455 38964173 -211723681 - SVA Other Other -20 1366 3 24 0 0 0 chr2 38964225 38964249 -211723605 + AT_rich Low_complexity Low_complexity 1 24 0 183 49 73 0 chr2 38964887 38964928 -211722926 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 314 281 94 35 chr2 38966052 38966255 -211721599 - L1ME3 LINE L1 -224 5938 5724 31497 113 13 59 chr2 38966260 38972714 -211715140 - L1PA7 LINE L1 0 6154 9 461 324 100 9 chr2 38972727 38973076 -211714778 - L1ME3 LINE L1 -435 5727 5347 324 219 171 0 chr2 38973120 38973202 -211714652 - L2 LINE L2 -2 3311 3216 338 300 140 13 chr2 38973721 38973871 -211713983 + MIR SINE MIR 8 176 -86 953 165 104 0 chr2 38974708 38974872 -211712982 - MER58A DNA MER1_type -43 181 1 342 322 39 81 chr2 38974919 38975276 -211712578 - L2 LINE L2 -1358 1956 1615 330 230 150 35 chr2 38975630 38975743 -211712111 - L2 LINE L2 0 3313 3188 244 250 31 0 chr2 38976044 38976108 -211711746 - MIR SINE MIR -36 226 161 359 182 15 121 chr2 38976415 38976547 -211711307 + MER104 DNA Tc2 1 118 -62 214 267 0 100 chr2 38976838 38976928 -211710926 + L2 LINE L2 3232 3312 -1 220 366 73 49 chr2 38976933 38977220 -211710634 - L2 LINE L2 -1979 1335 1042 26 30 0 0 chr2 38977384 38977417 -211710437 + AT_rich Low_complexity Low_complexity 1 33 0 1605 153 54 0 chr2 38977417 38977678 -211710176 - L1PB4 LINE L1 -2 6154 5880 759 224 0 33 chr2 38978443 38978629 -211709225 + MER5A DNA MER1_type 5 183 -6 1754 249 27 27 chr2 38979512 38979958 -211707896 + LTR40c LTR ERVL 8 453 -12 25 51 0 0 chr2 38983242 38983281 -211704573 + AT_rich Low_complexity Low_complexity 1 39 0 9016 197 26 17 chr2 38983552 38985845 -211702009 - L1MB3 LINE L1 -27 6392 4061 2795 70 3 3 chr2 38985845 38986200 -211701654 + THE1A LTR MaLR 1 355 0 9016 197 26 17 chr2 38986200 38987006 -211700848 - L1MB3 LINE L1 -2358 4061 3264 29960 108 11 30 chr2 38987014 38993522 -211694332 - L1PA7 LINE L1 0 6469 2 6475 74 15 23 chr2 38993674 38994602 -211693252 - SVA Other Other -1 1385 465 4598 208 72 47 chr2 38994640 38996494 -211691360 - L1MB3 LINE L1 -3101 3281 1368 2345 82 14 0 chr2 38996494 38996786 -211691068 + AluY SINE Alu 1 296 -15 4598 208 72 47 chr2 38996786 38997097 -211690757 - L1MB3 LINE L1 -5014 1368 1066 8322 119 16 12 chr2 38997102 38998395 -211689459 + HSMAR2 DNA Mariner 5 1301 -1 2183 101 13 7 chr2 38998513 38998820 -211689034 + AluSx SINE Alu 1 309 -3 867 271 130 16 chr2 38999465 39000141 -211687713 - L1M4 LINE L1 -1363 4783 4031 230 185 33 22 chr2 39000202 39000294 -211687560 + CT-rich Low_complexity Low_complexity 1 93 0 1459 191 65 0 chr2 39000308 39000570 -211687284 - AluJb SINE Alu -33 279 1 452 312 40 15 chr2 39000707 39001000 -211686854 - L1M4 LINE L1 -2309 3837 3530 229 224 86 0 chr2 39001177 39001235 -211686619 - L1MB7 LINE L1 -37 6147 6085 * 1989 189 30 61 chr2 39001209 39001798 -211686056 - L1MB7 LINE L1 -817 5329 4787 1590 288 68 10 chr2 39001807 39002637 -211685217 - L1M4 LINE L1 -1065 5081 4204 2277 249 54 11 chr2 39002637 39003265 -211684589 - L2 LINE L2 -275 3038 2386 1128 274 98 30 chr2 39003750 39004351 -211683503 - L2 LINE L2 -2 3311 2679 31 0 0 0 chr2 39004706 39004737 -211683117 + AT_rich Low_complexity Low_complexity 1 31 0 29 60 0 0 chr2 39004829 39004879 -211682975 + AT_rich Low_complexity Low_complexity 1 50 0 233 29 29 0 chr2 39004993 39005027 -211682827 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 2687 53 18 0 chr2 39005723 39006064 -211681790 + L1PA7 LINE L1 5804 6150 -4 308 192 0 125 chr2 39006457 39006577 -211681277 + L1MC5 LINE L1 7809 7913 -48 9877 58 11 102 chr2 39007194 39008706 -211679148 - SVA Other Other 0 1386 12 190 381 71 32 chr2 39008723 39008849 -211679005 - L2 LINE L2 -25 3247 3117 587 170 0 2 chr2 39008898 39009132 -211678722 + AluJo SINE Alu 1 282 -30 351 0 0 0 chr2 39009132 39009171 -211678683 + (TAGA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 39010430 39010453 -211677401 + AT_rich Low_complexity Low_complexity 1 23 0 2284 109 0 0 chr2 39010656 39010958 -211676896 - AluSx SINE Alu -10 302 1 631 277 41 62 chr2 39011068 39011310 -211676544 + L2 LINE L2 3031 3267 -5 737 190 50 17 chr2 39011386 39011565 -211676289 - MER5A DNA MER1_type -1 188 4 38 61 0 0 chr2 39012235 39012301 -211675553 + AT_rich Low_complexity Low_complexity 1 66 0 185 200 11 44 chr2 39013368 39013458 -211674396 + CT-rich Low_complexity Low_complexity 2 88 0 21 0 0 0 chr2 39013883 39013904 -211673950 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 39014073 39014098 -211673756 + AT_rich Low_complexity Low_complexity 1 25 0 677 165 253 0 chr2 39014204 39014374 -211673480 + MER58A DNA MER1_type 9 221 -3 22 35 0 0 chr2 39015201 39015230 -211672624 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr2 39015733 39015756 -211672098 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 784 300 116 16 chr2 39015761 39016148 -211671706 + L3 LINE CR1 399 824 -753 634 148 25 169 chr2 39016182 39016419 -211671435 + L1MC3 LINE L1 7562 7764 -21 2990 238 47 57 chr2 39016616 39017634 -211670220 + L1M4 LINE L1 3446 4453 -1693 3031 157 10 34 chr2 39017652 39018131 -211669723 + L1MC1 LINE L1 5751 6215 -118 2149 129 0 0 chr2 39018131 39018425 -211669429 + AluSx SINE Alu 1 294 -18 3031 157 10 34 chr2 39018425 39018536 -211669318 + L1MC1 LINE L1 6215 6327 -6 435 256 56 0 chr2 39019598 39019723 -211668131 - MIR SINE MIR -10 252 121 21 36 0 0 chr2 39020024 39020052 -211667802 + AT_rich Low_complexity Low_complexity 1 28 0 2222 76 23 23 chr2 39020216 39020517 -211667337 + AluY SINE Alu 1 301 -10 2424 91 0 0 chr2 39020591 39020898 -211666956 + AluSx SINE Alu 1 307 -5 46 92 0 0 chr2 39021772 39021902 -211665952 + AT_rich Low_complexity Low_complexity 1 130 0 536 339 42 17 chr2 39022398 39022634 -211665220 - MIR SINE MIR -14 248 7 455 185 17 101 chr2 39023192 39023261 -211664593 - MIR SINE MIR -152 110 54 2073 119 6 31 chr2 39023261 39023579 -211664275 - AluSx SINE Alu -2 310 1 455 185 17 101 chr2 39023579 39023628 -211664226 - MIR SINE MIR -208 54 2 181 242 0 0 chr2 39024184 39024217 -211663637 - L2 LINE L2 -865 2449 2417 666 331 19 19 chr2 39024259 39024628 -211663226 + L1ME3A LINE L1 489 857 -5262 823 232 85 17 chr2 39024901 39025207 -211662647 + L1ME1 LINE L1 5342 5712 -466 1351 200 83 3 chr2 39025214 39025514 -211662340 + L1ME1 LINE L1 5838 6161 -5 277 208 38 0 chr2 39025622 39025675 -211662179 + Tigger7 DNA MER2_type 2431 2485 -6 396 0 0 0 chr2 39025677 39025721 -211662133 + (CTA)n Simple_repeat Simple_repeat 3 46 0 611 313 76 16 chr2 39025734 39026184 -211661670 + L1ME3A LINE L1 2337 2813 -3316 309 332 43 28 chr2 39026183 39026394 -211661460 + L1ME3A LINE L1 5393 5606 -539 * 252 271 38 23 chr2 39026461 39026594 -211661260 + L1ME3A LINE L1 5800 5934 -219 1789 166 13 25 chr2 39026659 39026973 -211660881 + AluJo SINE Alu 3 312 0 231 267 27 0 chr2 39027612 39027697 -211660157 + (TA)n Simple_repeat Simple_repeat 1 87 0 1758 161 11 7 chr2 39028599 39028885 -211658969 + AluJo SINE Alu 1 287 -25 180 274 0 59 chr2 39028947 39028998 -211658856 - MIR3 SINE MIR -23 185 138 957 240 59 2 chr2 39029521 39029758 -211658096 + MIR SINE MIR 2 248 -14 449 324 56 44 chr2 39030174 39030424 -211657430 + MIR SINE MIR 10 262 0 424 248 20 0 chr2 39030588 39030689 -211657165 + MER5B DNA MER1_type 1 103 -75 2405 189 42 36 chr2 39030693 39030718 -211657136 - L1ME1 LINE L1 -9 6157 6133 1339 249 48 55 chr2 39030718 39031304 -211656550 - L1MB4 LINE L1 -40 6140 5559 359 282 78 10 chr2 39031524 39031627 -211656227 - L2 LINE L2 -4 3309 3200 413 306 62 12 chr2 39032567 39032825 -211655029 + L1ME4a LINE L1 5597 5867 -254 232 175 70 0 chr2 39032898 39032955 -211654899 - L1MA9 LINE L1 0 6312 6252 2103 102 4 0 chr2 39033625 39033899 -211653955 + AluSq SINE Alu 1 275 -38 600 101 0 0 chr2 39033901 39033990 -211653864 + (TAGA)n Simple_repeat Simple_repeat 3 91 0 2043 111 55 3 chr2 39034693 39035036 -211652818 - L1MA9 LINE L1 -3 6309 5949 41409 45 1 2 chr2 39035050 39041213 -211646641 - L1PA4 LINE L1 -2 6153 2 506 307 118 64 chr2 39042213 39042801 -211645053 + L2 LINE L2 2600 3267 -5 2249 81 0 17 chr2 39044279 39044577 -211643277 + AluSp SINE Alu 1 293 -20 22 35 0 0 chr2 39044817 39044846 -211643008 + AT_rich Low_complexity Low_complexity 1 29 0 288 333 46 0 chr2 39045128 39045215 -211642639 - L2 LINE L2 -46 3226 3136 2391 97 0 0 chr2 39045639 39045947 -211641907 + AluSc SINE Alu 1 308 -1 27 29 0 0 chr2 39047334 39047368 -211640486 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 39047860 39047888 -211639966 + AT_rich Low_complexity Low_complexity 1 28 0 507 319 151 54 chr2 39047985 39048106 -211639748 + L1ME4a LINE L1 5327 5435 -686 2762 133 11 5 chr2 39048106 39048551 -211639303 - LTR7 LTR ERV1 -2 448 1 507 319 151 54 chr2 39048551 39049057 -211638797 + L1ME4a LINE L1 5435 6015 -106 201 147 0 0 chr2 39049229 39049263 -211638591 + (CA)n Simple_repeat Simple_repeat 1 34 0 1454 146 43 47 chr2 39050043 39050296 -211637558 + AluJb SINE Alu 38 289 -23 31 0 0 0 chr2 39050296 39050327 -211637527 + AT_rich Low_complexity Low_complexity 1 31 0 291 197 0 15 chr2 39050344 39050410 -211637444 - LTR37A LTR ERV1 -319 107 43 2009 83 7 7 chr2 39050413 39050702 -211637152 - MER1A DNA MER1_type 0 529 241 3946 113 141 35 chr2 39050710 39051712 -211636142 + pTR5 LTR ERV1 769 2024 -414 231 287 53 0 chr2 39051713 39051807 -211636047 + LTR30 LTR ERV1 544 642 -80 1512 82 0 5 chr2 39051810 39052030 -211635824 + pTR5 LTR ERV1 172 390 -2048 1161 181 39 51 chr2 39052030 39052284 -211635570 - MER1A DNA MER1_type -276 251 1 266 316 89 36 chr2 39052313 39052481 -211635373 - MIR SINE MIR -73 189 13 224 333 107 19 chr2 39053168 39053327 -211634527 - MIR3 SINE MIR -25 183 11 450 258 131 30 chr2 39053416 39053614 -211634240 - MIR SINE MIR -43 219 2 259 224 19 65 chr2 39053657 39053764 -211634090 + GA-rich Low_complexity Low_complexity 1 102 0 3207 235 23 18 chr2 39054133 39054992 -211632862 - L1ME1 LINE L1 -7 6228 5365 6210 219 65 39 chr2 39055128 39056960 -211630894 - L1ME1 LINE L1 -1234 4981 3081 1192 53 13 0 chr2 39056960 39057110 -211630744 - L1PA7 LINE L1 -2 6152 6001 6210 219 65 39 chr2 39057110 39057457 -211630397 - L1ME1 LINE L1 -3134 3081 2745 751 275 17 8 chr2 39057491 39057731 -211630123 - L1ME1 LINE L1 -6057 339 98 1483 209 69 12 chr2 39058486 39058908 -211628946 - MER69 DNA AcHobo 0 2526 2081 184 294 110 29 chr2 39059561 39059697 -211628157 + L2 LINE L2 2867 3013 -300 213 309 175 8 chr2 39059784 39059910 -211627944 + L2 LINE L2 3158 3304 -9 224 333 0 12 chr2 39060017 39060098 -211627756 + G-rich Low_complexity Low_complexity 1 80 0 2133 146 14 27 chr2 39060124 39060493 -211627361 - THE1B LTR MaLR 0 364 1 214 328 115 0 chr2 39061066 39061188 -211626666 - MIR3 SINE MIR -61 147 12 1170 112 12 0 chr2 39061610 39061771 -211626083 - FAM SINE Alu -2 47 1 2615 220 46 45 chr2 39062445 39062911 -211624943 - L1ME1 LINE L1 -5 6441 5972 2270 90 3 10 chr2 39062911 39063212 -211624642 + AluSx SINE Alu 1 299 -13 2615 220 46 45 chr2 39063212 39063545 -211624309 - L1ME1 LINE L1 -474 5972 5641 203 307 57 0 chr2 39064095 39064183 -211623671 + L2 LINE L2 2296 2388 -926 29 0 0 0 chr2 39064959 39064988 -211622866 + AT_rich Low_complexity Low_complexity 1 29 0 34 0 0 0 chr2 39065056 39065090 -211622764 + AT_rich Low_complexity Low_complexity 1 34 0 566 319 136 37 chr2 39065280 39065980 -211621874 + L1 LINE L1 4073 4841 -1305 528 256 83 11 chr2 39067405 39067607 -211620247 + MIR SINE MIR 3 218 -44 281 309 73 0 chr2 39068177 39068287 -211619567 - MIR SINE MIR -115 147 30 260 278 0 28 chr2 39068984 39069056 -211618798 + L2 LINE L2 3194 3263 -9 423 0 0 0 chr2 39069401 39069448 -211618406 + (CA)n Simple_repeat Simple_repeat 2 48 0 550 270 0 8 chr2 39069563 39069689 -211618165 - MIR SINE MIR -112 150 26 7144 208 59 70 chr2 39070288 39070399 -211617455 - L1ME1 LINE L1 -1084 5342 5231 351 0 0 0 chr2 39070399 39070438 -211617416 + (TTA)n Simple_repeat Simple_repeat 2 40 0 7144 208 59 70 chr2 39070438 39070642 -211617212 - L1ME1 LINE L1 -1195 5231 5026 1963 174 40 0 chr2 39070642 39070993 -211616861 + MLT1A1 LTR MaLR 1 365 0 7144 208 59 70 chr2 39070993 39072757 -211615097 - L1ME1 LINE L1 -1400 5026 3244 442 0 35 0 chr2 39072757 39072815 -211615039 + (CA)n Simple_repeat Simple_repeat 1 60 0 7144 208 59 70 chr2 39072815 39075177 -211612677 - L1ME1 LINE L1 -3182 3244 950 402 226 39 117 chr2 39075858 39076115 -211611739 + L1M4b LINE L1 12 248 -6611 462 280 51 100 chr2 39076274 39076685 -211611169 + L1M4b LINE L1 798 1188 -5667 24 0 0 0 chr2 39076732 39076756 -211611098 + AT_rich Low_complexity Low_complexity 1 24 0 1039 276 30 61 chr2 39076777 39077056 -211610798 + L1M4b LINE L1 1861 2116 -4843 2238 98 0 0 chr2 39077056 39077352 -211610502 + AluSg SINE Alu 1 296 -14 1039 276 30 61 chr2 39077352 39077629 -211610225 + L1M4b LINE L1 2116 2400 -4559 873 230 26 4 chr2 39077645 39077871 -211609983 + L1ME1 LINE L1 5664 5894 -272 466 214 42 30 chr2 39077884 39078052 -211609802 - L1M4 LINE L1 -1598 4548 4379 226 367 13 0 chr2 39079281 39079360 -211608494 - L2 LINE L2 -6 3266 3187 1783 149 14 11 chr2 39079927 39080203 -211607651 - AluJo SINE Alu -16 296 20 489 239 66 46 chr2 39080300 39080497 -211607357 - MIR SINE MIR -15 247 47 329 291 29 48 chr2 39080571 39080777 -211607077 + L2 LINE L2 1565 1766 -1548 1628 152 0 15 chr2 39081106 39081370 -211606484 - AluSx SINE Alu -6 306 47 5917 122 27 12 chr2 39081746 39082970 -211604884 - L1MA4A LINE L1 0 6303 5061 706 208 34 39 chr2 39084081 39084259 -211603595 - MER5B DNA MER1_type 0 178 2 22 56 0 0 chr2 39084557 39084593 -211603261 + AT_rich Low_complexity Low_complexity 1 36 0 1221 270 91 40 chr2 39085757 39086338 -211601516 - MLT1L LTR MaLR -4 611 1 180 77 0 0 chr2 39086351 39086377 -211601477 + (CA)n Simple_repeat Simple_repeat 2 27 0 252 212 12 59 chr2 39086441 39086526 -211601328 - L2 LINE L2 -3 3269 3189 212 292 62 0 chr2 39086590 39086655 -211601199 + L2 LINE L2 2986 3054 -218 1803 189 21 9 chr2 39087540 39087874 -211599980 - MER58B DNA MER1_type -3 338 1 2665 123 41 7 chr2 39087947 39088361 -211599493 + MSTA LTR MaLR 1 428 0 1204 179 5 0 chr2 39089427 39089634 -211598220 + MER3 DNA MER1_type 2 209 0 2044 112 54 3 chr2 39090239 39090415 -211597439 - AluSc SINE Alu 0 309 111 554 0 15 0 chr2 39090415 39090481 -211597373 + (TTTTA)n Simple_repeat Simple_repeat 1 67 0 2044 112 54 3 chr2 39090481 39090598 -211597256 - AluSc SINE Alu -198 111 1 194 210 32 32 chr2 39091495 39091557 -211596297 - L2 LINE L2 -212 3060 2999 245 95 0 24 chr2 39091978 39092020 -211595834 + (CA)n Simple_repeat Simple_repeat 1 41 0 437 243 27 9 chr2 39092065 39092176 -211595678 + L2 LINE L2 3188 3300 -13 1950 219 105 10 chr2 39092485 39092979 -211594875 - L1MD2 LINE L1 -226 6133 5593 * 6697 33 0 0 chr2 39092973 39093751 -211594103 - L1PA4 LINE L1 -3 6152 5375 3158 19 0 0 chr2 39093749 39094117 -211593737 + L1PA4 LINE L1 4985 5352 -794 * 569 144 65 105 chr2 39094119 39094272 -211593582 - L1MD2 LINE L1 -607 5559 5413 21 0 0 0 chr2 39094277 39094298 -211593556 + AT_rich Low_complexity Low_complexity 1 21 0 207 69 0 0 chr2 39094324 39094353 -211593501 + (TG)n Simple_repeat Simple_repeat 2 30 0 247 266 51 13 chr2 39094396 39094475 -211593379 - MER112 DNA MER1_type -178 82 1 2131 129 27 0 chr2 39094571 39094866 -211592988 + AluSg SINE Alu 1 303 -7 362 315 82 42 chr2 39095184 39095514 -211592340 + L1ME LINE L1 5469 5811 -359 21 0 0 0 chr2 39095720 39095741 -211592113 + AT_rich Low_complexity Low_complexity 1 21 0 1205 198 34 23 chr2 39101964 39102227 -211585627 - ORSL DNA AcHobo -1 274 9 653 203 0 0 chr2 39102595 39102713 -211585141 + FLAM_A SINE Alu 1 118 -15 28 0 0 0 chr2 39102726 39102754 -211585100 + AT_rich Low_complexity Low_complexity 1 28 0 740 164 20 108 chr2 39103010 39103205 -211584649 - MER58A DNA MER1_type 0 224 47 365 181 42 0 chr2 39103780 39103852 -211584002 + MER53 DNA DNA 15 89 -100 * 366 205 13 0 chr2 39103789 39103867 -211583987 - MER53 DNA DNA -16 173 95 22 0 0 0 chr2 39104871 39104893 -211582961 + GC_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 39106570 39106602 -211581252 + GC_rich Low_complexity Low_complexity 1 32 0 414 296 16 0 chr2 39107943 39108068 -211579786 - MIR SINE MIR -104 158 32 2139 96 6 38 chr2 39108159 39108473 -211579381 + AluSx SINE Alu 1 304 -8 2270 89 30 7 chr2 39108746 39109049 -211578805 - AluSx SINE Alu -2 310 1 591 143 71 29 chr2 39110974 39111114 -211576740 - MER104 DNA Tc2 -3 177 32 2687 78 120 0 chr2 39111154 39111554 -211576300 - LTR7 LTR ERV1 -2 448 1 2413 95 50 13 chr2 39111554 39111932 -211575922 - HERVH LTR ERV1 0 7713 7322 1399 134 18 5 chr2 39111930 39112147 -211575707 - HERVH LTR ERV1 -1894 5819 5600 * 4552 136 1 1 chr2 39112148 39112810 -211575044 - HERVH LTR ERV1 -2564 5149 4488 3589 89 4 6 chr2 39112812 39113315 -211574539 - HERVH LTR ERV1 -3720 3993 3492 888 149 20 0 chr2 39113305 39113453 -211574401 - HERVH LTR ERV1 -4423 3290 3140 * 20637 92 14 25 chr2 39113447 39116465 -211571389 - HERVH LTR ERV1 -4726 2987 1 2653 85 126 0 chr2 39116467 39116865 -211570989 - LTR7 LTR ERV1 -2 448 1 560 176 101 91 chr2 39117240 39117439 -211570415 + L1MC4 LINE L1 7842 8042 0 241 323 10 35 chr2 39117916 39118100 -211569754 + CT-rich Low_complexity Low_complexity 1 179 0 2155 118 14 0 chr2 39118479 39118776 -211569078 - AluSx SINE Alu -11 301 1 975 114 0 0 chr2 39119097 39119263 -211568591 + (TC)n Simple_repeat Simple_repeat 1 166 0 514 306 155 57 chr2 39119562 39120156 -211567698 - L3 LINE CR1 -174 1403 752 1899 132 11 7 chr2 39120568 39120876 -211566978 - AluJb SINE Alu 0 309 1 655 286 39 20 chr2 39121522 39121777 -211566077 + MIR SINE MIR 2 261 -1 561 286 40 52 chr2 39121985 39122237 -211565617 + MIR SINE MIR 13 261 -1 803 84 0 0 chr2 39123395 39123502 -211564352 - FLAM_A SINE Alu -3 139 33 450 330 24 15 chr2 39123704 39123910 -211563944 - MIR SINE MIR -29 233 26 1649 195 133 25 chr2 39124442 39124914 -211562940 - Charlie1b DNA MER1_type 0 523 1 2508 47 0 3 chr2 39124939 39125237 -211562617 + AluY SINE Alu 1 297 -14 363 23 0 0 chr2 39125247 39125291 -211562563 + (TG)n Simple_repeat Simple_repeat 1 44 0 481 305 38 30 chr2 39125807 39126043 -211561811 - MIR SINE MIR -2 260 23 613 267 37 0 chr2 39127404 39127565 -211560289 + MIR3 SINE MIR 30 196 -12 26 30 0 0 chr2 39127592 39127625 -211560229 + AT_rich Low_complexity Low_complexity 1 33 0 300 27 0 0 chr2 39129928 39129965 -211557889 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 257 0 0 29 chr2 39130382 39130416 -211557438 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 201 108 0 0 chr2 39130535 39130572 -211557282 + (T)n Simple_repeat Simple_repeat 1 37 0 341 354 133 19 chr2 39130823 39131235 -211556619 + L2 LINE L2 2855 3313 0 233 328 72 65 chr2 39131409 39131702 -211556152 - L2 LINE L2 -1812 1502 1208 717 260 82 27 chr2 39131775 39132141 -211555713 + L1ME4a LINE L1 5615 6000 -121 4696 164 30 3 chr2 39132231 39133095 -211554759 - L1PA13 LINE L1 -992 5154 4268 6390 102 11 0 chr2 39133095 39134110 -211553744 + L1PA13 LINE L1 5141 6163 0 420 295 31 106 chr2 39134428 39134500 -211553354 - MIR SINE MIR -6 256 180 2435 81 3 0 chr2 39134500 39134809 -211553045 + AluY SINE Alu 1 310 -1 420 295 31 106 chr2 39134809 39134963 -211552891 - MIR SINE MIR -82 180 47 1920 183 86 3 chr2 39135686 39136046 -211551808 + MLT1B LTR MaLR 1 390 0 693 247 172 62 chr2 39136050 39136423 -211551431 - LTR16A LTR ERVL -12 438 25 3326 145 48 43 chr2 39137527 39137735 -211550119 + LTR9 LTR ERV1 3 208 -404 2305 85 6 38 chr2 39137735 39137774 -211550080 - AluSg SINE Alu -1 309 270 180 77 0 0 chr2 39137774 39137800 -211550054 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2305 85 6 38 chr2 39137800 39138079 -211549775 - AluSg SINE Alu -40 270 1 3326 145 48 43 chr2 39138079 39138477 -211549377 + LTR9 LTR ERV1 208 612 0 226 168 215 28 chr2 39138994 39139101 -211548753 + L1ME4a LINE L1 5990 6116 -5 1782 170 133 3 chr2 39139164 39139488 -211548366 - MER47A DNA MER2_type 0 366 1 189 0 0 0 chr2 39141537 39141558 -211546296 + (TTTTC)n Simple_repeat Simple_repeat 5 25 0 8047 91 19 0 chr2 39141561 39143399 -211544455 - L1PA8 LINE L1 -14 6158 4293 464 339 24 6 chr2 39143735 39143903 -211543951 + MIR3 SINE MIR 31 201 -7 1532 155 40 65 chr2 39145193 39145515 -211542339 + L1MB2 LINE L1 5857 6170 -1 396 227 31 21 chr2 39147171 39147268 -211540586 + MIR3 SINE MIR 108 205 -3 655 287 203 20 chr2 39147561 39148004 -211539850 - MLT1L LTR MaLR -85 530 7 190 286 131 24 chr2 39148060 39148144 -211539710 - MIR SINE MIR -97 111 19 914 252 150 23 chr2 39148147 39148588 -211539266 + L1ME4a LINE L1 5584 6080 -41 2529 62 0 7 chr2 39149048 39149357 -211538497 + AluY SINE Alu 1 307 -4 2296 84 3 13 chr2 39149491 39149799 -211538055 + AluSq SINE Alu 9 313 0 351 0 0 0 chr2 39150573 39150612 -211537242 + (CA)n Simple_repeat Simple_repeat 1 39 0 379 289 45 51 chr2 39150666 39150822 -211537032 + L3 LINE CR1 998 1152 -425 359 250 86 35 chr2 39150819 39150935 -211536919 + L2 LINE L2 3151 3272 0 * 440 351 22 0 chr2 39150946 39151131 -211536723 + L3 LINE CR1 1170 1358 -219 186 274 105 48 chr2 39151265 39151389 -211536465 - L2 LINE L2 -4 3309 3179 654 159 143 0 chr2 39151925 39152051 -211535803 + L1MB7 LINE L1 6041 6184 0 270 286 129 36 chr2 39152343 39152483 -211535371 + MIR3 SINE MIR 13 165 -43 210 247 0 68 chr2 39152547 39152620 -211535234 - MIR SINE MIR -77 185 118 518 254 7 29 chr2 39153269 39153407 -211534447 + MIR3 SINE MIR 65 199 -9 288 223 172 21 chr2 39153656 39153768 -211534086 + MIR SINE MIR 1 125 -83 205 323 21 0 chr2 39154009 39154102 -211533752 + GA-rich Low_complexity Low_complexity 4 98 0 647 272 46 6 chr2 39154485 39154658 -211533196 + MIR SINE MIR 21 200 -62 2245 119 0 6 chr2 39154683 39154994 -211532860 - AluSx SINE Alu -3 309 1 351 271 220 11 chr2 39155476 39155653 -211532201 - MIR SINE MIR -32 230 17 2300 123 113 8 chr2 39156744 39157126 -211530728 + MSTA LTR MaLR 4 425 -3 9806 141 30 27 chr2 39157131 39158704 -211529150 + MSTA-int LTR MaLR 3 1580 0 1693 155 209 6 chr2 39158704 39159058 -211528796 + MSTA LTR MaLR 1 426 -2 1328 165 19 0 chr2 39160940 39161146 -211526708 - MER6B DNA MER2_type 0 210 1 485 234 66 7 chr2 39162105 39162242 -211525612 - MER58B DNA MER1_type 0 341 197 44577 39 4 9 chr2 39162760 39168945 -211518909 - L1PA4 LINE L1 0 6155 1 331 333 23 8 chr2 39171030 39171159 -211516695 + MIR SINE MIR 10 140 -122 651 323 68 53 chr2 39171666 39172484 -211515370 - HAL1b LINE L1 -514 834 4 1038 260 70 54 chr2 39173544 39174132 -211513722 - L1MEc LINE L1 -5017 1379 783 616 320 92 73 chr2 39174132 39174899 -211512955 + L2 LINE L2 1997 2805 -508 216 97 0 0 chr2 39174899 39174930 -211512924 + (CA)n Simple_repeat Simple_repeat 2 32 0 616 320 92 73 chr2 39174930 39175449 -211512405 + L2 LINE L2 2805 3313 0 234 0 0 0 chr2 39176420 39176446 -211511408 + (T)n Simple_repeat Simple_repeat 1 26 0 601 279 249 13 chr2 39177370 39177764 -211510090 + L2 LINE L2 2811 3297 -16 769 132 0 0 chr2 39177767 39177873 -211509981 + U6 snRNA snRNA 1 106 -1 4555 159 4 12 chr2 39177874 39178624 -211509230 + L1PA16 LINE L1 5414 6157 -9 231 148 19 56 chr2 39178675 39178729 -211509125 + GA-rich Low_complexity Low_complexity 4 55 0 1050 144 19 30 chr2 39180153 39180393 -211507461 + LTR54 LTR ERV1 192 488 -22 4661 140 35 0 chr2 39180393 39180876 -211506978 - L1MA4A LINE L1 -12 6291 5773 315 0 0 0 chr2 39180876 39180911 -211506943 + (TG)n Simple_repeat Simple_repeat 2 36 0 4661 140 35 0 chr2 39180911 39181141 -211506713 - L1MA4A LINE L1 -530 5773 5553 4259 148 51 14 chr2 39181141 39181940 -211505914 + L1 LINE L1 4275 5103 -1043 367 111 0 32 chr2 39181940 39182003 -211505851 + LTR54 LTR ERV1 450 510 0 1755 251 101 10 chr2 39182099 39182617 -211505237 - MLT1G LTR MaLR -61 529 2 1898 270 200 32 chr2 39182926 39182956 -211504898 - L2 LINE L2 -3 3310 3286 3158 223 40 8 chr2 39182956 39183589 -211504265 - MER82 DNA MER2_type 0 653 1 1898 270 200 32 chr2 39183589 39184751 -211503103 - L2 LINE L2 -27 3286 1937 870 249 0 0 chr2 39184751 39184916 -211502938 + MER63A DNA MER1_type 41 205 -5 238 233 17 75 chr2 39186199 39186319 -211501535 - MIR SINE MIR -137 125 13 1821 191 39 56 chr2 39186349 39186815 -211501039 + MLT1C LTR MaLR 9 466 -1 3400 138 31 36 chr2 39187834 39188448 -211499406 + LTR36 LTR ERV1 1 611 0 2199 106 3 0 chr2 39192318 39192621 -211495233 + AluSg1 SINE Alu 1 304 -5 200 323 0 0 chr2 39192751 39192816 -211495038 + MIR3 SINE MIR 138 202 -6 560 100 0 0 chr2 39194029 39194109 -211493745 - MADE1 DNA Mariner 0 80 1 2459 140 3 3 chr2 39194473 39194837 -211493017 + THE1B LTR MaLR 1 364 0 312 91 0 0 chr2 39194931 39194975 -211492879 + (TA)n Simple_repeat Simple_repeat 1 44 0 249 298 88 0 chr2 39195349 39195463 -211492391 + L2 LINE L2 2896 3019 -253 189 244 90 39 chr2 39195560 39195638 -211492216 + L2 LINE L2 3141 3222 -50 962 177 29 6 chr2 39195638 39195813 -211492041 + MER20 DNA MER1_type 20 198 -21 377 299 42 14 chr2 39196113 39196257 -211491597 - MIR3 SINE MIR -5 203 56 329 240 89 75 chr2 39196571 39196717 -211491137 - MER20B DNA MER1_type -620 163 16 336 280 154 14 chr2 39196842 39196985 -211490869 + MER5A DNA MER1_type 27 189 0 366 327 85 12 chr2 39196991 39197156 -211490698 - MER5B DNA MER1_type 0 178 2 650 195 104 0 chr2 39197235 39197389 -211490465 + MER5B DNA MER1_type 6 175 -3 2013 116 31 10 chr2 39198039 39198331 -211489523 + AluSg SINE Alu 1 298 -12 272 148 16 0 chr2 39199736 39199797 -211488057 + (TA)n Simple_repeat Simple_repeat 2 63 0 681 170 89 0 chr2 39199808 39199943 -211487911 - MLT2B2 LTR ERVL -41 474 328 364 218 59 0 chr2 39199959 39200060 -211487794 + MLT1K LTR MaLR 456 562 -26 257 327 58 44 chr2 39201251 39201417 -211486437 + MIR SINE MIR 23 187 -67 1826 157 3 10 chr2 39202709 39203002 -211484852 - AluJb SINE Alu -21 291 1 511 245 48 65 chr2 39203040 39203350 -211484504 + L1MC5 LINE L1 7609 7913 -48 1790 133 83 0 chr2 39203425 39203703 -211484151 + AluSx SINE Alu 1 301 -11 21 36 0 0 chr2 39203768 39203796 -211484058 + AT_rich Low_complexity Low_complexity 1 28 0 3107 147 4 0 chr2 39204381 39204871 -211482983 + L1MA9 LINE L1 5818 6309 -3 507 253 149 0 chr2 39205843 39206017 -211481837 - MIR SINE MIR -55 207 8 187 406 30 10 chr2 39206179 39206381 -211481473 - L2 LINE L2 -884 2430 2225 596 203 42 0 chr2 39206649 39206767 -211481087 - FLAM_A SINE Alu -10 123 1 249 161 136 86 chr2 39207547 39207628 -211480226 - L2 LINE L2 -7 3306 3222 1041 219 148 26 chr2 39207856 39208235 -211479619 - L1ME3A LINE L1 -15 6155 5731 378 230 0 11 chr2 39208240 39208327 -211479527 + LTR67 LTR ERVL 472 557 0 2169 304 45 11 chr2 39209144 39210098 -211477756 + L2 LINE L2 1535 2520 -794 306 355 26 0 chr2 39210188 39210343 -211477511 - L1ME LINE L1 -270 5851 5693 404 242 17 42 chr2 39211291 39211411 -211476443 - L1ME LINE L1 -462 5659 5543 248 318 144 12 chr2 39213024 39213197 -211474657 + MIR SINE MIR 65 260 -2 1715 170 17 3 chr2 39213756 39214050 -211473804 - AluJo SINE Alu -14 298 1 2232 118 36 36 chr2 39214595 39214959 -211472895 - THE1B LTR MaLR 0 364 1 2406 78 10 10 chr2 39216848 39217156 -211470698 - AluY SINE Alu -3 308 1 22 0 0 0 chr2 39217679 39217701 -211470153 + AT_rich Low_complexity Low_complexity 1 22 0 224 259 54 108 chr2 39219403 39219569 -211468285 - MIR3 SINE MIR -11 197 41 788 285 143 32 chr2 39219609 39220044 -211467810 - MLT1K LTR MaLR -6 582 100 2530 72 0 0 chr2 39220166 39220472 -211467382 - AluY SINE Alu -5 306 1 742 190 0 29 chr2 39220645 39220782 -211467072 + FLAM_A SINE Alu 1 133 0 277 271 23 23 chr2 39221627 39221756 -211466098 + GA-rich Low_complexity Low_complexity 2 130 0 967 249 32 0 chr2 39221968 39222185 -211465669 - MER58A DNA MER1_type 0 224 1 1357 186 77 55 chr2 39222529 39222894 -211464960 - MLT1A2 LTR MaLR 0 374 2 3745 107 52 33 chr2 39224479 39225115 -211462739 - MER39B LTR ERV1 0 653 6 313 120 0 20 chr2 39225597 39225647 -211462207 + MLT1F LTR MaLR 494 542 0 2379 110 0 0 chr2 39225828 39226138 -211461716 + AluSx SINE Alu 1 310 -2 306 296 133 20 chr2 39226635 39226838 -211461016 - L1MC4 LINE L1 -1036 7006 6781 595 76 0 0 chr2 39227248 39227327 -211460527 - AluSp SINE Alu -9 304 226 1376 102 6 0 chr2 39227327 39227504 -211460350 - AluSp SINE Alu -126 187 10 453 266 18 0 chr2 39227556 39227665 -211460189 + MER81 DNA DNA 1 111 -3 447 256 23 93 chr2 39228256 39228428 -211459426 - MIR3 SINE MIR -14 194 35 278 336 115 0 chr2 39228797 39228919 -211458935 + L2 LINE L2 2927 3062 -251 495 217 99 50 chr2 39228958 39229119 -211458735 + MLT1C LTR MaLR 1 169 -298 203 316 31 67 chr2 39229179 39229372 -211458482 + L2 LINE L2 2868 3053 -219 279 0 0 0 chr2 39229429 39229460 -211458394 + (TG)n Simple_repeat Simple_repeat 2 32 0 246 192 0 0 chr2 39230043 39230095 -211457759 + (CA)n Simple_repeat Simple_repeat 2 53 0 231 239 56 14 chr2 39231330 39231401 -211456453 + MIR SINE MIR 63 136 -72 589 66 22 0 chr2 39231471 39231562 -211456292 + (TAGA)n Simple_repeat Simple_repeat 3 95 0 279 173 0 0 chr2 39232090 39232142 -211455712 + GA-rich Low_complexity Low_complexity 1 52 0 254 180 0 0 chr2 39234521 39234571 -211453283 - MLT1F LTR MaLR 0 542 493 1964 212 108 22 chr2 39234649 39235148 -211452706 - MLT1F LTR MaLR 0 542 1 3025 211 73 90 chr2 39235918 39236987 -211450867 + L1ME1 LINE L1 4492 5564 -602 2437 107 52 19 chr2 39236987 39237350 -211450504 + THE1C LTR MaLR 1 375 0 3025 211 73 90 chr2 39237350 39237683 -211450171 + L1ME1 LINE L1 5564 5901 -265 2085 215 30 21 chr2 39237688 39237869 -211449985 + L1ME3A LINE L1 5625 5803 -367 2408 145 0 23 chr2 39237869 39238214 -211449640 + MER1B DNA MER1_type 1 337 0 2085 215 30 21 chr2 39238214 39238567 -211449287 + L1ME3A LINE L1 5803 6164 -6 310 192 29 15 chr2 39238914 39239021 -211448833 + MIR SINE MIR 8 173 -89 456 283 136 74 chr2 39239660 39240176 -211447678 + L1ME4a LINE L1 5506 6053 -68 2245 60 4 0 chr2 39240201 39240467 -211447387 + L1PA7 LINE L1 5877 6143 -11 9034 203 138 30 chr2 39240496 39242884 -211444970 + L1MD1 LINE L1 3 2648 -3892 4367 178 8 27 chr2 39242889 39243535 -211444319 + L1MD1 LINE L1 5806 6434 -202 2208 86 62 0 chr2 39243535 39243825 -211444029 + AluSx SINE Alu 1 308 -4 4367 178 8 27 chr2 39243825 39244021 -211443833 + L1MD1 LINE L1 6434 6632 -4 3862 185 30 55 chr2 39245981 39246804 -211441050 - L1MB8 LINE L1 -1 6177 5375 561 349 11 38 chr2 39247477 39247738 -211440116 + MIR SINE MIR 9 262 0 306 333 53 57 chr2 39247769 39248033 -211439821 + L2 LINE L2 2918 3180 -92 267 245 157 113 chr2 39248122 39248326 -211439528 - MIR SINE MIR -8 254 42 690 129 29 0 chr2 39248415 39248554 -211439300 + CT-rich Low_complexity Low_complexity 3 145 0 553 204 35 14 chr2 39248560 39248702 -211439152 - MLT1A1 LTR MaLR -49 316 172 749 300 19 14 chr2 39249972 39250182 -211437672 - MLT1I LTR MaLR 0 409 199 4783 171 24 21 chr2 39250183 39250897 -211436957 + L1MB8 LINE L1 4963 5684 -494 2123 128 14 0 chr2 39250897 39251193 -211436661 + AluSx SINE Alu 6 305 -7 4783 171 24 21 chr2 39251193 39251690 -211436164 + L1MB8 LINE L1 5684 6178 0 2518 111 70 41 chr2 39252759 39252802 -211435052 - MSTA LTR MaLR -3 425 385 2322 94 3 0 chr2 39252802 39253100 -211434754 + AluSp SINE Alu 1 299 -14 2518 111 70 41 chr2 39253100 39253469 -211434385 - MSTA LTR MaLR -43 385 1 999 208 97 14 chr2 39253688 39253895 -211433959 - MER58A DNA MER1_type 0 224 1 3041 178 83 24 chr2 39253929 39254577 -211433277 - Tigger7 DNA MER2_type 0 2587 1 187 307 13 53 chr2 39254803 39254878 -211432976 + L2 LINE L2 3200 3271 -1 4308 217 80 30 chr2 39254893 39257183 -211430671 + L1MC2 LINE L1 3 2809 -4132 * 5960 225 28 74 chr2 39257161 39258401 -211429453 + L1MC2 LINE L1 3792 4902 -2039 204 67 0 0 chr2 39258401 39258431 -211429423 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5960 225 28 74 chr2 39258431 39259240 -211428614 + L1MC2 LINE L1 4902 5747 -1194 727 86 36 14 chr2 39259240 39259379 -211428475 + GA-rich Low_complexity Low_complexity 2 143 0 4790 166 40 52 chr2 39259381 39259829 -211428025 + L1MC2 LINE L1 6124 6576 -563 2114 100 18 0 chr2 39259829 39260129 -211427725 + AluSp SINE Alu 1 305 0 4790 166 40 52 chr2 39260129 39260708 -211427146 + L1MC2 LINE L1 6576 7139 0 199 229 115 16 chr2 39260767 39260828 -211427026 - MIR3 SINE MIR 0 208 142 190 383 64 0 chr2 39260817 39260911 -211426943 - L2 LINE L2 -2 3270 3171 * 257 106 0 21 chr2 39260967 39261014 -211426840 + (GA)n Simple_repeat Simple_repeat 1 46 0 248 154 19 0 chr2 39261645 39261697 -211426157 + CT-rich Low_complexity Low_complexity 4 56 0 380 229 31 42 chr2 39261801 39261897 -211425957 + L2 LINE L2 3178 3272 0 224 79 53 0 chr2 39262736 39262774 -211425080 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5321 110 29 6 chr2 39264879 39265817 -211422037 + L1PB2 LINE L1 5176 6167 -1 280 291 23 23 chr2 39265820 39265906 -211421948 - MIR SINE MIR -156 106 21 716 151 0 0 chr2 39266506 39266612 -211421242 - FLAM_C SINE Alu -36 107 2 901 302 78 25 chr2 39266616 39267403 -211420451 + L1ME3A LINE L1 4640 5496 -666 1848 155 0 34 chr2 39267409 39267630 -211420224 + AluJb SINE Alu 1 209 -103 2271 194 80 15 chr2 39267630 39268105 -211419749 + LTR22 LTR ERVK 1 506 -3 1848 155 0 34 chr2 39268105 39268205 -211419649 + AluJb SINE Alu 209 311 -1 604 246 81 104 chr2 39268206 39268649 -211419205 + L1ME3A LINE L1 5499 5931 -239 2065 123 0 0 chr2 39268948 39269280 -211418574 + AluSx SINE Alu 1 332 0 201 171 0 0 chr2 39269303 39269338 -211418516 + A-rich Low_complexity Low_complexity 1 35 0 332 268 120 14 chr2 39269413 39269555 -211418299 - MIR3 SINE MIR -12 196 40 206 319 29 0 chr2 39269625 39269694 -211418160 + L2 LINE L2 3187 3257 -15 628 201 69 83 chr2 39271994 39272198 -211415656 - MIR SINE MIR -13 249 49 247 350 57 14 chr2 39272423 39272563 -211415291 - L2 LINE L2 -222 3050 2905 627 222 56 44 chr2 39272617 39272797 -211415057 + MLT1J LTR MaLR 5 186 -325 263 278 67 0 chr2 39272913 39273003 -211414851 + MLT1J LTR MaLR 379 474 -37 1132 234 77 15 chr2 39274132 39274303 -211413551 - MER20B DNA MER1_type -430 353 194 2254 131 0 0 chr2 39274303 39274609 -211413245 + AluSx SINE Alu 1 306 -6 1132 234 77 15 chr2 39274609 39274762 -211413092 - MER20B DNA MER1_type -589 194 9 1412 208 134 11 chr2 39275498 39275863 -211411991 + MER66A LTR ERV1 29 438 -40 282 235 50 0 chr2 39276155 39276274 -211411580 + (TCTCTG)n Simple_repeat Simple_repeat 2 126 0 1046 288 28 6 chr2 39276552 39276875 -211410979 + LTR16A LTR ERVL 121 450 0 500 281 27 86 chr2 39276878 39277027 -211410827 + HERV16 LTR ERVL 4 133 -4863 1948 144 34 0 chr2 39277027 39277319 -211410535 - AluJo SINE Alu -10 302 1 500 281 27 86 chr2 39277319 39277425 -211410429 + HERV16 LTR ERVL 133 244 -4752 4345 282 58 30 chr2 39277712 39278628 -211409226 + HERV16 LTR ERVL 1607 2579 -2417 2082 198 100 32 chr2 39278628 39279098 -211408756 - MLT1D LTR MaLR 0 505 4 4345 282 58 30 chr2 39279098 39279625 -211408229 + HERV16 LTR ERVL 2579 3090 -1906 1175 183 14 0 chr2 39279812 39280025 -211407829 + AluJo SINE Alu 91 306 -6 3912 309 51 40 chr2 39280030 39281995 -211405859 + HERV16 LTR ERVL 3341 5326 -438 728 331 74 11 chr2 39282322 39282606 -211405248 + LTR16A LTR ERVL 143 444 -6 189 0 0 0 chr2 39282626 39282647 -211405207 + (A)n Simple_repeat Simple_repeat 1 21 0 1283 187 58 4 chr2 39283323 39283548 -211404306 + MER8 DNA MER2_type 2 238 -1 2352 98 0 9 chr2 39283584 39283899 -211403955 - AluSx SINE Alu 0 312 1 1243 195 71 62 chr2 39284538 39284973 -211402881 - LTR27 LTR ERV1 -2 634 208 813 185 11 34 chr2 39284955 39285133 -211402721 - LTR28 LTR ERV1 -842 178 5 * 1817 193 0 0 chr2 39285206 39285517 -211402337 - AluJb SINE Alu 0 312 2 1218 266 81 35 chr2 39285549 39285600 -211402254 - HAL1b LINE L1 -416 932 885 1214 203 32 9 chr2 39285600 39285817 -211402037 - MER58A DNA MER1_type -2 222 1 1218 266 81 35 chr2 39285817 39286221 -211401633 - HAL1b LINE L1 -463 885 446 2302 106 3 0 chr2 39286221 39286523 -211401331 - AluSx SINE Alu -9 303 1 1218 266 81 35 chr2 39286523 39286610 -211401244 - HAL1b LINE L1 -902 446 364 421 319 54 43 chr2 39286905 39287184 -211400670 - HAL1b LINE L1 -1008 340 59 1813 150 26 23 chr2 39287769 39287883 -211399971 - AluJb SINE Alu -4 308 196 2343 94 7 0 chr2 39287883 39288182 -211399672 + AluSx SINE Alu 2 302 -10 372 22 0 0 chr2 39288182 39288227 -211399627 + (GA)n Simple_repeat Simple_repeat 2 46 0 1813 150 26 23 chr2 39288227 39288418 -211399436 - AluJb SINE Alu -115 197 1 5367 119 41 14 chr2 39288426 39289295 -211398559 - L1MC1 LINE L1 0 6333 5438 2105 140 3 3 chr2 39289295 39289602 -211398252 - AluSq SINE Alu -6 307 1 5367 119 41 14 chr2 39289602 39289617 -211398237 - L1MC1 LINE L1 -895 5438 5425 2284 193 87 19 chr2 39289802 39289913 -211397941 + MER45B DNA AcHobo 466 568 -1013 1696 178 10 23 chr2 39289913 39290222 -211397632 - AluJo SINE Alu -7 305 1 2284 193 87 19 chr2 39290222 39290648 -211397206 + MER45B DNA AcHobo 568 1040 0 346 272 58 29 chr2 39290648 39290751 -211397103 - MIR3 SINE MIR -12 196 91 249 196 0 0 chr2 39291493 39291544 -211396310 + (CA)n Simple_repeat Simple_repeat 1 51 0 1038 134 2 3 chr2 39291755 39292259 -211395595 - ALR/Alpha Satellite centromeric 0 503 1 21 0 0 0 chr2 39292299 39292320 -211395534 + AT_rich Low_complexity Low_complexity 1 21 0 921 172 13 16 chr2 39292357 39292579 -211395275 - ALR/Alpha Satellite centromeric 0 221 1 982 192 1 4 chr2 39292774 39293797 -211394057 - ALR/Alpha Satellite centromeric 0 1020 1 925 131 11 26 chr2 39293812 39294133 -211393721 - ALR/Alpha Satellite centromeric -20 316 1 1005 173 3 16 chr2 39294238 39296949 -211390905 + ALR/Alpha Satellite centromeric 1 2674 -64 2045 128 45 0 chr2 39297469 39297759 -211390095 - AluSg SINE Alu -7 303 1 207 69 0 0 chr2 39297976 39298005 -211389849 + (CA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr2 39298028 39298049 -211389805 + AT_rich Low_complexity Low_complexity 1 21 0 533 139 14 111 chr2 39298063 39298207 -211389647 + L1ME LINE L1 5430 5559 -607 2972 16 0 0 chr2 39298209 39298577 -211389277 - L1PA3 LINE L1 -794 5352 4985 5978 56 3 5 chr2 39298577 39299345 -211388509 + L1PA3 LINE L1 5375 6142 -13 1016 168 1 3 chr2 39299350 39300610 -211387244 - ALR/Alpha Satellite centromeric -1 1258 1 2227 97 0 0 chr2 39350664 39350962 -211336892 - AluSq SINE Alu -15 298 1 2163 83 10 0 chr2 39350971 39351261 -211336593 - AluY SINE Alu -16 295 3 2370 72 3 0 chr2 39351277 39351581 -211336273 - AluSp SINE Alu -8 305 1 403 288 129 58 chr2 39351741 39351839 -211336015 + L1MC/D LINE L1 5255 5345 -2463 791 163 16 0 chr2 39351839 39351968 -211335886 + AluJ SINE Alu 2 132 -170 403 288 129 58 chr2 39351968 39352195 -211335659 + L1MC/D LINE L1 5345 5603 -2205 1925 123 27 3 chr2 39352197 39352490 -211335364 + AluSx SINE Alu 1 300 -12 905 100 0 0 chr2 39352597 39352717 -211335137 - AluSg SINE Alu -190 120 1 604 149 0 11 chr2 39352731 39352825 -211335029 + AluJ SINE Alu 132 224 -88 203 208 0 19 chr2 39352843 39352896 -211334958 + A-rich Low_complexity Low_complexity 2 53 0 2300 48 13 13 chr2 39353001 39353312 -211334542 + AluY SINE Alu 1 311 0 2074 88 61 0 chr2 39353316 39353610 -211334244 + AluSx SINE Alu 1 312 0 1774 118 22 4 chr2 39353626 39353926 -211333928 + AluSx SINE Alu 7 311 0 610 210 17 80 chr2 39353939 39354115 -211333739 + FRAM SINE Alu 1 165 -1 21 0 0 0 chr2 39354323 39354344 -211333510 + AT_rich Low_complexity Low_complexity 1 21 0 1448 207 27 3 chr2 39354357 39354656 -211333198 + AluJb SINE Alu 1 306 -6 2134 117 3 0 chr2 39354747 39355055 -211332799 + AluSx SINE Alu 1 309 -3 1535 158 135 7 chr2 39355348 39355652 -211332202 - MER2 DNA MER2_type -1 343 1 251 235 173 0 chr2 39355928 39356009 -211331845 - MIR SINE MIR -39 223 129 2141 81 3 3 chr2 39357040 39357323 -211330531 - AluSp SINE Alu -30 283 1 200 61 61 0 chr2 39358760 39358793 -211329061 + GA-rich Low_complexity Low_complexity 2 36 0 2356 59 0 16 chr2 39360231 39360536 -211327318 - AluY SINE Alu -11 300 1 2021 130 59 3 chr2 39361299 39361654 -211326200 + THE1C LTR MaLR 1 375 0 2376 59 0 0 chr2 39362097 39362401 -211325453 - AluY SINE Alu -7 304 1 708 168 0 0 chr2 39362706 39362819 -211325035 + AluJo/FLAM SINE Alu 2 114 -198 1967 128 7 0 chr2 39362819 39363115 -211324739 - AluSg SINE Alu -12 298 1 22 0 0 0 chr2 39363119 39363141 -211324713 + AT_rich Low_complexity Low_complexity 1 22 0 952 217 95 62 chr2 39363821 39364190 -211323664 - LTR16A1 LTR ERVL -1 456 76 670 201 143 0 chr2 39364329 39364483 -211323371 - MER69A DNA AcHobo -1 176 1 251 345 60 17 chr2 39364503 39364619 -211323235 - MIR SINE MIR -72 136 16 471 308 81 0 chr2 39365487 39365685 -211322169 - L3 LINE CR1 -51 1526 1313 2196 113 0 0 chr2 39365706 39366017 -211321837 + AluSq SINE Alu 1 311 -2 232 302 62 10 chr2 39366147 39366243 -211321611 + L2 LINE L2 3213 3313 0 331 266 150 91 chr2 39366247 39366438 -211321416 - L3 LINE CR1 -279 1298 1083 1964 114 10 7 chr2 39366438 39366736 -211321118 + AluSx SINE Alu 1 299 -13 331 266 150 91 chr2 39366736 39366830 -211321024 - L3 LINE CR1 -494 1083 996 434 343 89 28 chr2 39366902 39367115 -211320739 + MIR SINE MIR 25 250 -12 2132 56 74 0 chr2 39368343 39368627 -211319227 - AluY SINE Alu -6 305 1 1851 113 29 7 chr2 39369029 39369332 -211318522 + AluSg SINE Alu 1 309 0 2178 125 0 0 chr2 39369478 39369790 -211318064 - AluSq SINE Alu -1 312 1 505 281 138 0 chr2 39369969 39370136 -211317718 - MIR SINE MIR 0 262 73 3603 131 23 84 chr2 39370253 39370913 -211316941 - LTR8 LTR ERV1 -1 690 78 2190 103 7 0 chr2 39370913 39371215 -211316639 + AluSp SINE Alu 1 304 -9 3603 131 23 84 chr2 39371215 39371289 -211316565 - LTR8 LTR ERV1 -613 78 1 258 275 193 37 chr2 39371338 39371447 -211316407 + L2 LINE L2 3186 3311 -2 810 205 19 0 chr2 39371459 39371615 -211316239 + FRAM SINE Alu 1 159 -17 4886 40 2 0 chr2 39371615 39372226 -211315628 + L1PA5 LINE L1 5565 6176 0 2032 108 3 3 chr2 39372619 39372906 -211314948 + AluSx SINE Alu 21 307 -5 227 330 17 62 chr2 39373883 39374015 -211313839 + L3b LINE CR1 1250 1374 -209 2092 122 0 10 chr2 39374015 39374319 -211313535 + AluSx SINE Alu 1 301 -11 227 330 17 62 chr2 39374319 39374362 -211313492 + L3b LINE CR1 1374 1417 -166 2300 90 0 0 chr2 39374564 39374864 -211312990 + AluSg SINE Alu 1 300 -10 332 211 256 0 chr2 39375467 39375582 -211312272 + MIR3 SINE MIR 39 183 -25 180 0 0 0 chr2 39376123 39376143 -211311711 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 793 93 0 0 chr2 39376161 39376269 -211311585 + AluSp/q SINE Alu 199 306 -7 534 232 7 56 chr2 39376420 39376562 -211311292 - MER69A DNA AcHobo -42 135 1 2318 111 99 0 chr2 39376729 39377059 -211310795 + MER1A DNA MER1_type 1 363 -166 1412 73 9 2 chr2 39377059 39377291 -211310563 - MER4E LTR ERV1 0 766 483 695 139 10 0 chr2 39377291 39377392 -211310462 - AluSq/x SINE Alu -206 107 6 1340 161 44 32 chr2 39377393 39377641 -211310213 + MER4E LTR ERV1 218 468 -311 1046 86 0 7 chr2 39377649 39377789 -211310065 - AluSx SINE Alu -134 178 40 390 219 88 106 chr2 39377793 39377953 -211309901 + L2 LINE L2 2927 3083 -230 2282 82 0 0 chr2 39377973 39378267 -211309587 - AluSg SINE Alu -16 294 1 1938 128 7 3 chr2 39378278 39378576 -211309278 - AluSq SINE Alu -14 299 1 6680 61 4 48 chr2 39378587 39380320 -211307534 - SVA Other Other -683 1383 1 460 82 47 0 chr2 39380321 39380406 -211307448 + GA-rich Low_complexity Low_complexity 3 91 0 322 210 6 182 chr2 39380507 39380683 -211307171 - MIR SINE MIR -56 206 62 2128 112 3 0 chr2 39381280 39381575 -211306279 - AluSx SINE Alu -16 296 1 2329 247 76 14 chr2 39381640 39382337 -211305517 - L1ME3A LINE L1 -6 6164 5425 1806 170 0 0 chr2 39382361 39382655 -211305199 - AluSx SINE Alu -16 296 3 316 355 14 14 chr2 39382788 39382926 -211304928 + L2 LINE L2 3127 3264 -8 2038 135 7 0 chr2 39383021 39383325 -211304529 - AluSx SINE Alu -6 306 1 1341 132 12 33 chr2 39383444 39383687 -211304167 - AluJo SINE Alu -3 309 72 1737 156 27 0 chr2 39384238 39384533 -211303321 + AluSx SINE Alu 1 303 -9 4093 129 118 35 chr2 39384569 39385850 -211302004 - pTR5 LTR ERV1 0 2438 743 1928 112 0 0 chr2 39385850 39386119 -211301735 + AluSx SINE Alu 31 299 -13 2206 93 10 3 chr2 39386119 39386419 -211301435 + AluSg SINE Alu 1 302 -8 1924 134 0 23 chr2 39386964 39387129 -211300725 - AluSx SINE Alu -13 299 143 1966 138 0 3 chr2 39387129 39387427 -211300427 - AluSx SINE Alu -15 297 1 1924 134 0 23 chr2 39387427 39387567 -211300287 - AluSx SINE Alu -169 143 1 2375 120 11 0 chr2 39387582 39387940 -211299914 - L1PA15 LINE L1 0 6165 5804 3351 135 24 5 chr2 39387940 39388670 -211299184 - L1PA15 LINE L1 -677 5488 4752 549 269 98 21 chr2 39388732 39388925 -211298929 - MER102b DNA MER1_type 0 341 134 955 205 5 5 chr2 39388926 39389121 -211298733 - AluJb SINE Alu -9 303 109 25 0 0 0 chr2 39389166 39389191 -211298663 + AT_rich Low_complexity Low_complexity 1 25 0 1509 251 54 54 chr2 39389748 39390284 -211297570 + MLT1L LTR MaLR 3 541 -74 2184 74 7 32 chr2 39390284 39390593 -211297261 - AluSg SINE Alu -9 301 1 1509 251 54 54 chr2 39390593 39390665 -211297189 + MLT1L LTR MaLR 540 611 -4 2340 76 0 0 chr2 39390710 39391013 -211296841 + AluY SINE Alu 1 303 -8 1451 162 19 52 chr2 39391297 39391606 -211296248 - AluJo SINE Alu -4 308 10 183 284 64 64 chr2 39392623 39392732 -211295122 - L3 LINE CR1 -856 721 613 397 287 4 8 chr2 39394075 39394258 -211293596 - MER41B LTR ERV1 -208 427 112 2350 76 0 3 chr2 39394320 39394624 -211293230 - AluSg SINE Alu -7 303 1 478 321 38 27 chr2 39395152 39395336 -211292518 + MIR SINE MIR 2 187 -75 2646 3 0 0 chr2 39395337 39395627 -211292227 + AluYa5 SINE Alu 12 301 -10 1239 111 0 0 chr2 39395630 39395801 -211292053 + AluSp SINE Alu 137 307 -6 190 250 23 0 chr2 39395824 39395868 -211291986 + MIR SINE MIR 218 262 0 768 162 6 11 chr2 39396492 39396671 -211291183 + CT-rich Low_complexity Low_complexity 3 180 0 327 25 0 0 chr2 39396841 39396881 -211290973 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 1685 165 0 11 chr2 39396881 39397281 -211290573 - AluJb SINE Alu 0 399 3 891 224 74 83 chr2 39397282 39397448 -211290406 + MER69 DNA AcHobo 2112 2278 -248 2097 121 0 13 chr2 39397448 39397761 -211290093 + AluSx SINE Alu 1 309 -3 891 224 74 83 chr2 39397761 39397930 -211289924 + MER69 DNA AcHobo 2278 2445 -81 1622 151 28 11 chr2 39397930 39398214 -211289640 - AluJb SINE Alu -10 302 14 891 224 74 83 chr2 39398214 39398296 -211289558 + MER69 DNA AcHobo 2445 2526 0 2270 86 3 6 chr2 39399418 39399732 -211288122 - AluSp SINE Alu 0 313 1 717 85 0 11 chr2 39400180 39400274 -211287580 + AluSg/x SINE Alu 85 177 -135 198 0 0 0 chr2 39400278 39400300 -211287554 + (A)n Simple_repeat Simple_repeat 1 22 0 377 297 31 92 chr2 39400302 39400497 -211287357 + MIR SINE MIR 22 204 -58 403 303 162 11 chr2 39400570 39400755 -211287099 - MIR SINE MIR -1 261 49 1914 114 22 41 chr2 39401087 39401402 -211286452 - AluSg SINE Alu 0 310 2 1561 154 31 0 chr2 39402302 39402561 -211285293 - AluJo SINE Alu -45 267 1 327 216 21 82 chr2 39402767 39402864 -211284990 - MER66B LTR ERV1 -104 382 292 2093 115 3 0 chr2 39402867 39403163 -211284691 - AluSx SINE Alu -15 297 1 22 0 0 0 chr2 39403163 39403185 -211284669 + AT_rich Low_complexity Low_complexity 1 22 0 225 290 0 0 chr2 39403267 39403329 -211284525 + A-rich Low_complexity Low_complexity 1 62 0 288 172 0 0 chr2 39403687 39403745 -211284109 + CT-rich Low_complexity Low_complexity 1 58 0 1611 66 5 0 chr2 39404043 39404254 -211283600 + AluSg1 SINE Alu 1 212 -97 208 229 9 67 chr2 39405099 39405204 -211282650 + G-rich Low_complexity Low_complexity 3 101 0 1121 107 0 0 chr2 39405894 39406053 -211281801 + AluSg/x SINE Alu 145 303 -9 492 103 216 10 chr2 39406055 39406152 -211281702 - L1MD3 LINE L1 -146 7849 7733 247 232 12 61 chr2 39407003 39407085 -211280769 + MER96 DNA MER1_type? 82 159 -16 2030 102 4 0 chr2 39407423 39407698 -211280156 + AluSx SINE Alu 1 276 -36 453 221 0 0 chr2 39407801 39407887 -211279967 + L1MD3 LINE L1 7888 7973 -22 1855 117 0 0 chr2 39407887 39408144 -211279710 + AluSx SINE Alu 1 257 -55 378 0 0 0 chr2 39408201 39408243 -211279611 + (TG)n Simple_repeat Simple_repeat 2 43 0 2096 111 3 3 chr2 39408771 39409077 -211278777 + AluSq SINE Alu 1 306 -7 842 128 0 30 chr2 39409084 39409217 -211278637 + FLAM_C SINE Alu 5 133 0 272 226 140 0 chr2 39409302 39409395 -211278459 - MER5A DNA MER1_type -77 112 7 826 143 0 30 chr2 39409758 39409891 -211277963 - FLAM_A SINE Alu -4 129 1 339 290 92 46 chr2 39410782 39410913 -211276941 - MIR3 SINE MIR -62 146 10 2063 137 0 0 chr2 39411036 39411342 -211276512 - AluSx SINE Alu -6 306 1 2148 120 0 16 chr2 39411345 39411662 -211276192 - AluSx SINE Alu 0 312 1 311 279 38 0 chr2 39411822 39411901 -211275953 - L2 LINE L2 -5 3267 3186 1632 158 24 17 chr2 39412185 39412483 -211275371 + AluJb SINE Alu 1 300 -12 238 227 45 15 chr2 39412794 39412860 -211274994 + MARNA DNA Mariner 243 310 -276 1617 136 173 60 chr2 39412885 39413267 -211274587 + MSTA LTR MaLR 4 428 0 1235 198 105 100 chr2 39413482 39413523 -211274331 - MLT2B1 LTR ERVL 0 520 481 246 32 0 0 chr2 39413523 39413554 -211274300 + (TG)n Simple_repeat Simple_repeat 2 32 0 1235 198 105 100 chr2 39413554 39413899 -211273955 - MLT2B1 LTR ERVL -39 481 129 2530 99 117 5 chr2 39413899 39414284 -211273570 - MSTA LTR MaLR 0 428 1 1235 198 105 100 chr2 39414284 39414325 -211273529 - MLT2B1 LTR ERVL -391 129 90 209 239 42 14 chr2 39415185 39415256 -211272598 + T-rich Low_complexity Low_complexity 2 74 0 448 225 9 45 chr2 39415376 39415487 -211272367 - MER5B DNA MER1_type -65 113 7 238 250 132 26 chr2 39415725 39415801 -211272053 - L2 LINE L2 -62 3210 3127 262 237 79 13 chr2 39416054 39416130 -211271724 + MER91C DNA MER1_type 25 105 -35 1505 183 122 25 chr2 39416459 39416819 -211271035 + MSTD LTR MaLR 2 396 0 2314 92 0 0 chr2 39416967 39417272 -211270582 - AluSx SINE Alu -7 305 1 1976 110 7 10 chr2 39418990 39419281 -211268573 - AluSx SINE Alu -14 298 9 2235 107 0 0 chr2 39419498 39419834 -211268020 - AluSg SINE Alu 0 336 1 442 311 126 18 chr2 39420341 39420563 -211267291 + MIR SINE MIR 2 247 -15 392 322 102 75 chr2 39420705 39421242 -211266612 + L2 LINE L2 2693 3263 -9 2349 64 3 0 chr2 39422269 39422565 -211265289 + AluY SINE Alu 3 299 -12 314 325 169 54 chr2 39422770 39423065 -211264789 - L2 LINE L2 -1 3271 2943 379 194 0 0 chr2 39423746 39423808 -211264046 + MER5B DNA MER1_type 1 62 -116 1947 145 3 0 chr2 39423810 39424106 -211263748 + AluSx SINE Alu 1 297 -15 696 186 46 26 chr2 39424114 39424361 -211263493 + MER61A LTR ERV1 1 343 0 426 250 9 52 chr2 39424368 39424484 -211263370 + MER5B DNA MER1_type 63 173 -5 2856 87 0 16 chr2 39425583 39425964 -211261890 + THE1C LTR MaLR 1 375 0 482 279 54 7 chr2 39425964 39426111 -211261743 - MIR3 SINE MIR -34 174 21 263 179 0 36 chr2 39426118 39426174 -211261680 + MER5B DNA MER1_type 1 54 -124 410 357 97 35 chr2 39426477 39426941 -211260913 - L2 LINE L2 -222 3050 2563 2282 108 0 6 chr2 39426983 39427297 -211260557 - AluSx SINE Alu 0 312 1 1158 178 0 17 chr2 39427463 39427693 -211260161 - AluJo SINE Alu 0 312 87 292 265 29 49 chr2 39427696 39427798 -211260056 - AluSg/x SINE Alu -116 186 87 2247 108 0 9 chr2 39428166 39428481 -211259373 - AluSx SINE Alu 0 312 1 1479 132 0 9 chr2 39428649 39428877 -211258977 - AluJo SINE Alu 0 312 87 314 210 4 0 chr2 39428880 39428953 -211258901 - AluJ/monomer SINE Alu -251 51 2 254 330 79 88 chr2 39429006 39429336 -211258518 + L2 LINE L2 2946 3272 0 2170 110 3 0 chr2 39430912 39431222 -211256632 - AluSx SINE Alu -1 311 1 295 322 11 11 chr2 39431630 39431720 -211256134 - L2 LINE L2 -4 3268 3179 721 260 20 20 chr2 39432642 39432846 -211255008 + MIR SINE MIR 47 250 -12 2074 132 0 3 chr2 39432972 39433276 -211254578 - AluSx SINE Alu -9 303 1 253 250 182 45 chr2 39433289 39433421 -211254433 + L2 LINE L2 3164 3313 0 2095 125 0 3 chr2 39434354 39434666 -211253188 - AluSx SINE Alu -1 311 1 1586 158 3 107 chr2 39434681 39435017 -211252837 - AluJo SINE Alu -1 301 1 2128 108 10 3 chr2 39435121 39435428 -211252426 - AluSg SINE Alu 0 310 2 469 298 43 19 chr2 39435776 39435984 -211251870 + L2 LINE L2 3010 3222 -91 284 118 39 0 chr2 39435984 39436035 -211251819 + Alu SINE Alu 247 299 -3 412 204 65 11 chr2 39436039 39436132 -211251722 + L2 LINE L2 3213 3310 -3 892 281 38 32 chr2 39436528 39436869 -211250985 - LTR67 LTR ERVL -2 555 213 744 157 25 57 chr2 39436879 39437038 -211250816 - LTR47A LTR ERVL -4 448 295 310 239 123 65 chr2 39437327 39437482 -211250372 - LTR67 LTR ERVL -392 165 2 3388 156 13 24 chr2 39437554 39438170 -211249684 - L1MB8 LINE L1 0 6178 5570 273 258 52 31 chr2 39438199 39438296 -211249558 - MIR SINE MIR -116 146 48 2355 97 0 0 chr2 39438358 39438668 -211249186 - AluSx SINE Alu -2 310 1 793 226 58 24 chr2 39438942 39439150 -211248704 + MLT1L LTR MaLR 135 349 -266 1823 140 46 35 chr2 39439345 39439716 -211248138 - THE1C LTR MaLR 0 375 1 375 225 25 0 chr2 39439909 39439988 -211247866 + L1MB5 LINE L1 6064 6144 -30 2308 93 0 0 chr2 39439988 39440298 -211247556 + AluSx SINE Alu 1 310 -2 267 189 94 0 chr2 39441489 39441542 -211246312 + MIR SINE MIR 82 139 -69 662 232 156 24 chr2 39441710 39441921 -211245933 - MLT1I LTR MaLR -14 395 157 1795 154 0 0 chr2 39442062 39442342 -211245512 - AluSx SINE Alu -32 280 1 297 75 0 0 chr2 39442458 39442498 -211245356 + (TTA)n Simple_repeat Simple_repeat 2 41 0 648 178 0 23 chr2 39442502 39442631 -211245223 - FLAM_A SINE Alu -9 133 8 2060 122 0 0 chr2 39442718 39443034 -211244820 - AluSx SINE Alu 0 316 1 1476 167 72 0 chr2 39443036 39443299 -211244555 - AluJb SINE Alu -19 293 12 224 396 104 11 chr2 39443378 39443560 -211244294 + L2 LINE L2 2715 2913 -401 597 323 45 0 chr2 39443745 39443943 -211243911 - MIR SINE MIR -3 259 53 701 271 175 23 chr2 39443974 39444121 -211243733 + L1ME4a LINE L1 5290 5413 -708 1608 151 48 4 chr2 39444121 39444392 -211243462 + AluSx SINE Alu 1 283 -29 701 271 175 23 chr2 39444392 39444832 -211243022 + L1ME4a LINE L1 5413 5946 -175 344 153 0 5 chr2 39444950 39445008 -211242846 + AluSc SINE Alu 1 49 -252 1458 76 0 0 chr2 39445008 39445193 -211242661 + AluSc SINE Alu 125 309 0 206 0 0 65 chr2 39446093 39446124 -211241730 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2357 87 0 0 chr2 39446235 39446544 -211241310 - AluSx SINE Alu -3 309 1 363 300 0 0 chr2 39446756 39446836 -211241018 - L2 LINE L2 -1 3312 3233 1301 217 94 3 chr2 39446849 39447148 -211240706 + MER58B DNA MER1_type 1 326 -15 2180 126 0 0 chr2 39447240 39447549 -211240305 + AluSx SINE Alu 1 309 -3 2307 93 0 0 chr2 39449293 39449632 -211238222 - AluSg SINE Alu 0 310 1 311 291 97 0 chr2 39450016 39450119 -211237735 + L3 LINE CR1 1463 1575 -2 313 248 29 95 chr2 39450822 39451032 -211236822 - L1ME3A LINE L1 -8 6162 5967 690 312 55 3 chr2 39451107 39451399 -211236455 - L1ME3A LINE L1 -219 5951 5645 1780 144 7 16 chr2 39451569 39451874 -211235980 + AluSx SINE Alu 1 302 -10 526 70 28 0 chr2 39452065 39452136 -211235718 + Alu SINE Alu 221 293 -16 455 278 139 12 chr2 39453347 39453520 -211234334 - MIR3 SINE MIR -10 198 4 291 234 203 8 chr2 39453730 39453858 -211233996 - MER112 DNA MER1_type -41 219 67 423 339 0 30 chr2 39454153 39454321 -211233533 - MIR3 SINE MIR -5 203 41 1990 102 26 36 chr2 39454530 39454868 -211232986 - AluY SINE Alu 0 335 1 234 200 18 18 chr2 39454868 39454889 -211232965 + CT-rich Low_complexity Low_complexity 2 56 0 26 0 0 0 chr2 39454949 39454975 -211232879 + AT_rich Low_complexity Low_complexity 1 26 0 801 279 40 47 chr2 39455173 39455495 -211232359 - L2 LINE L2 -50 3263 2944 2166 115 0 3 chr2 39455594 39455907 -211231947 - AluSq SINE Alu -1 312 1 228 346 39 15 chr2 39456128 39456258 -211231596 - L2 LINE L2 -298 2974 2842 1807 152 45 0 chr2 39456280 39456570 -211231284 + AluSx SINE Alu 1 303 -9 228 378 52 41 chr2 39456757 39457027 -211230827 - L2 LINE L2 -580 2734 2462 781 190 6 13 chr2 39457437 39457595 -211230259 + L1MA10 LINE L1 6176 6332 -2 21 36 0 0 chr2 39457742 39457770 -211230084 + AT_rich Low_complexity Low_complexity 1 28 0 190 143 0 29 chr2 39457934 39457969 -211229885 + MIR SINE MIR 107 140 -68 830 119 40 0 chr2 39458905 39459031 -211228823 - FLAM_C SINE Alu -12 131 1 2102 117 0 0 chr2 39459266 39459565 -211228289 + AluSx SINE Alu 1 299 -13 234 224 17 35 chr2 39459571 39459629 -211228225 - L2 LINE L2 -16 3256 3200 281 286 71 43 chr2 39460795 39460935 -211226919 + MIR SINE MIR 73 216 -46 407 213 22 44 chr2 39461212 39461352 -211226502 + (TAGA)n Simple_repeat Simple_repeat 2 139 -41 3396 141 23 95 chr2 39461352 39461627 -211226227 + LTR8 LTR ERV1 1 294 -397 2138 117 0 3 chr2 39461627 39461934 -211225920 + AluSx SINE Alu 1 306 -6 3396 141 23 95 chr2 39461934 39462403 -211225451 + LTR8 LTR ERV1 294 691 0 407 213 22 44 chr2 39462403 39462445 -211225409 + (TAGA)n Simple_repeat Simple_repeat 139 180 0 257 232 0 18 chr2 39462453 39462509 -211225345 - MLT1L LTR MaLR -8 607 553 2316 81 10 3 chr2 39462510 39462819 -211225035 + AluY SINE Alu 1 311 0 473 0 0 17 chr2 39462832 39462890 -211224964 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 283 102 85 34 chr2 39462914 39463054 -211224800 + Alu SINE Alu 247 389 0 367 322 122 9 chr2 39463083 39463313 -211224541 - MLT1L LTR MaLR -110 505 250 439 285 106 17 chr2 39464174 39464487 -211223367 + MLT1K LTR MaLR 184 547 -41 2097 76 47 0 chr2 39464617 39464894 -211222960 + AluY SINE Alu 1 290 -21 242 266 0 0 chr2 39465790 39465854 -211222000 + (CTG)n Simple_repeat Simple_repeat 3 66 0 569 14 14 0 chr2 39465996 39466066 -211221788 + (TAAA)n Simple_repeat Simple_repeat 2 72 0 979 90 0 0 chr2 39466426 39466560 -211221294 - AluSg/x SINE Alu 0 312 179 2205 87 13 0 chr2 39466978 39467278 -211220576 - AluY SINE Alu -7 304 1 2109 128 0 3 chr2 39467638 39467944 -211219910 - AluSx SINE Alu -7 305 1 276 254 164 16 chr2 39469032 39469154 -211218700 - L2 LINE L2 -9 3304 3165 245 246 49 107 chr2 39469258 39469380 -211218474 - L2 LINE L2 -341 2972 2858 2334 87 0 10 chr2 39469602 39469914 -211217940 + AluSg SINE Alu 2 310 0 201 344 135 16 chr2 39470198 39470509 -211217345 + L2 LINE L2 2133 2480 -834 1474 141 79 3 chr2 39470557 39470796 -211217058 - MLT1D LTR MaLR -5 500 258 524 62 0 0 chr2 39470796 39470860 -211216994 + MER39B LTR ERV1 1 64 -589 * 1251 203 54 104 chr2 39470853 39471316 -211216538 + LTR8A LTR ERV1 288 727 0 * 1624 80 8 76 chr2 39471316 39471577 -211216277 + MER39B LTR ERV1 411 653 0 1034 139 100 6 chr2 39471591 39471771 -211216083 - MLT1D LTR MaLR -308 197 1 238 242 48 0 chr2 39471866 39471928 -211215926 + GA-rich Low_complexity Low_complexity 4 68 0 349 279 121 85 chr2 39472129 39472401 -211215453 + L2 LINE L2 2985 3266 -6 186 43 0 0 chr2 39473039 39473062 -211214792 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 28 0 0 0 chr2 39473252 39473280 -211214574 + AT_rich Low_complexity Low_complexity 1 28 0 782 294 92 30 chr2 39473370 39473845 -211214009 - L1ME LINE L1 -389 5775 5265 1492 181 16 41 chr2 39474033 39474177 -211213677 + L1MC1 LINE L1 4964 5110 -1123 1715 159 20 10 chr2 39474177 39474479 -211213375 - AluJb SINE Alu -7 305 1 1492 181 16 41 chr2 39474479 39474882 -211212972 + L1MC1 LINE L1 5110 5486 -747 3010 130 106 20 chr2 39474882 39475422 -211212432 + LTR18B LTR ERVL 1 586 -28 5471 126 6 4 chr2 39475450 39476290 -211211564 + L1MC1 LINE L1 5482 6323 -10 2101 92 7 0 chr2 39476290 39476572 -211211282 + AluY SINE Alu 1 284 -27 289 214 10 51 chr2 39476659 39476757 -211211097 - Charlie7 DNA MER1_type 0 2612 2519 221 343 0 0 chr2 39477249 39477319 -211210535 - MIR3 SINE MIR -25 183 114 1627 145 21 25 chr2 39477449 39477762 -211210092 - AluJo SINE Alu 0 312 1 2078 106 7 3 chr2 39477969 39478270 -211209584 - AluSg SINE Alu -8 302 1 822 226 38 0 chr2 39478484 39478643 -211209211 + MER5A DNA MER1_type 7 171 -18 187 186 23 0 chr2 39478649 39478692 -211209162 + MER5A DNA MER1_type 1 44 -145 1015 200 0 11 chr2 39478834 39479019 -211208835 + AluJo SINE Alu 1 183 -129 1927 98 0 0 chr2 39479146 39479401 -211208453 + AluSx SINE Alu 7 261 -51 1896 134 6 32 chr2 39479465 39479778 -211208076 - AluSx SINE Alu -7 305 1 3443 121 27 38 chr2 39479778 39480446 -211207408 - L1MB2 LINE L1 -340 5831 5171 1689 169 0 7 chr2 39480631 39480927 -211206927 + AluJb SINE Alu 1 294 -18 2113 96 13 16 chr2 39480927 39481240 -211206614 + AluSx SINE Alu 1 312 0 1277 157 42 34 chr2 39481799 39482061 -211205793 + AluJo SINE Alu 44 307 -5 951 207 19 28 chr2 39482152 39482365 -211205489 - MIR SINE MIR -16 246 36 21 36 0 0 chr2 39483095 39483123 -211204731 + AT_rich Low_complexity Low_complexity 1 28 0 268 234 56 56 chr2 39483351 39483458 -211204396 - L1MC5 LINE L1 -426 7535 7429 276 273 112 75 chr2 39483499 39483777 -211204077 - L1MC4a LINE L1 -1456 6352 6065 1881 127 0 3 chr2 39483833 39484116 -211203738 - AluSg SINE Alu -18 292 11 2285 92 0 0 chr2 39484125 39484431 -211203423 - AluSx SINE Alu -6 306 1 2277 236 70 16 chr2 39484433 39485080 -211202774 - L1MC4a LINE L1 -1871 5937 5256 509 275 53 86 chr2 39485117 39485455 -211202399 - L1MC4a LINE L1 -898 5248 4922 231 114 0 0 chr2 39485492 39485527 -211202327 + (CA)n Simple_repeat Simple_repeat 2 36 0 244 270 45 0 chr2 39485527 39485616 -211202238 + L1ME4a LINE L1 5977 6069 -52 198 0 0 0 chr2 39487118 39487140 -211200714 + (T)n Simple_repeat Simple_repeat 1 22 0 220 314 58 25 chr2 39488325 39488446 -211199408 - MIR3 SINE MIR -43 165 41 1009 213 74 4 chr2 39488574 39488818 -211199036 - MIR SINE MIR -1 261 1 339 244 138 48 chr2 39488876 39489045 -211198809 - MIR SINE MIR -48 214 38 180 167 56 19 chr2 39489795 39489849 -211198005 - MIR SINE MIR -137 71 16 1793 123 26 23 chr2 39491002 39491311 -211196543 + AluSp SINE Alu 1 310 -3 6485 14 1 15 chr2 39491507 39492221 -211195633 + L1PA2 LINE L1 5451 6154 -1 23 20 6 0 chr2 39492234 39492296 -211195558 + AT_rich Low_complexity Low_complexity 1 30 0 213 39 0 0 chr2 39492303 39492329 -211195525 + (A)n Simple_repeat Simple_repeat 1 26 0 348 24 0 0 chr2 39493971 39494012 -211193842 + (CA)n Simple_repeat Simple_repeat 1 41 0 184 341 23 0 chr2 39494431 39494519 -211193335 + MIR SINE MIR 46 135 -127 607 200 25 0 chr2 39495183 39495303 -211192551 - FLAM_C SINE Alu -20 123 1 1132 307 19 17 chr2 39495332 39495743 -211192111 - LTR16B LTR ERVL 0 464 53 297 167 13 51 chr2 39495806 39495884 -211191970 - L1M4 LINE L1 -913 5233 5159 878 146 29 0 chr2 39495887 39496048 -211191806 - AluJ SINE Alu 0 305 141 2560 119 91 10 chr2 39496048 39496444 -211191410 + MSTA LTR MaLR 1 428 0 865 188 0 0 chr2 39496457 39496590 -211191264 - AluJ SINE Alu -169 133 1 680 298 125 38 chr2 39496591 39497149 -211190705 - L1M4 LINE L1 -981 5165 4657 2379 96 0 3 chr2 39497149 39497452 -211190402 + AluY SINE Alu 1 302 -9 680 298 125 38 chr2 39497452 39497512 -211190342 - L1M4 LINE L1 -1489 4657 4604 1873 155 3 22 chr2 39497512 39497828 -211190026 + AluJo SINE Alu 1 310 -2 680 298 125 38 chr2 39497828 39498017 -211189837 - L1M4 LINE L1 -1542 4604 4287 443 253 132 32 chr2 39498968 39499158 -211188696 + MIR SINE MIR 17 225 -37 389 260 0 30 chr2 39499330 39499430 -211188424 - MIR SINE MIR -58 204 108 723 204 0 72 chr2 39499581 39499748 -211188106 - FRAM SINE Alu -2 174 20 2380 91 0 3 chr2 39500214 39500523 -211187331 - AluY SINE Alu -3 308 1 983 127 0 8 chr2 39501282 39501416 -211186438 - FLAM_C SINE Alu 0 133 1 186 298 165 0 chr2 39501473 39501594 -211186260 - L2 LINE L2 -5 3308 3168 1523 176 37 48 chr2 39501636 39501931 -211185923 - AluJb SINE Alu -19 293 2 668 122 0 0 chr2 39502936 39503026 -211184828 - AluS SINE Alu -222 91 2 23 33 0 0 chr2 39503335 39503365 -211184489 + AT_rich Low_complexity Low_complexity 1 30 0 446 225 0 0 chr2 39503688 39503777 -211184077 + L1M4 LINE L1 4684 4772 -1374 1865 69 0 13 chr2 39503880 39504113 -211183741 - AluY SINE Alu -81 230 1 567 149 168 0 chr2 39504315 39504422 -211183432 + FLAM_C SINE Alu 1 125 -8 2168 108 0 14 chr2 39505478 39505637 -211182217 - AluSq SINE Alu -21 292 137 1810 121 48 35 chr2 39505637 39505926 -211181928 - AluSg SINE Alu -17 293 1 2168 108 0 14 chr2 39505926 39506062 -211181792 - AluSq SINE Alu -176 137 1 537 68 0 0 chr2 39506229 39506303 -211181551 + (TG)n Simple_repeat Simple_repeat 1 74 0 2477 68 0 0 chr2 39506376 39506672 -211181182 - AluY SINE Alu -15 296 1 2299 85 0 0 chr2 39507141 39507453 -211180401 - AluSg SINE Alu 0 312 1 304 332 63 21 chr2 39508187 39508377 -211179477 + MIR SINE MIR 1 198 -64 642 267 187 33 chr2 39508495 39508795 -211179059 + L2 LINE L2 2967 3312 -1 457 279 52 22 chr2 39508862 39508998 -211178856 + MER5A DNA MER1_type 50 189 0 248 260 128 77 chr2 39509462 39509658 -211178196 + MIR SINE MIR 2 207 -55 2461 69 0 3 chr2 39510059 39510363 -211177491 - AluY SINE Alu -8 303 1 239 227 34 92 chr2 39510466 39510585 -211177269 - L1MC/D LINE L1 -2053 5755 5644 1721 161 12 46 chr2 39510852 39511175 -211176679 + AluJb SINE Alu 1 312 0 2211 101 13 13 chr2 39511282 39511589 -211176265 - AluSq SINE Alu -6 307 1 2197 94 0 27 chr2 39511940 39512239 -211175615 - AluSx SINE Alu -13 299 9 2114 74 42 7 chr2 39512729 39513014 -211174840 - AluY SINE Alu -16 295 1 330 294 206 0 chr2 39513317 39513453 -211174401 + MER5A DNA MER1_type 26 189 0 184 306 0 0 chr2 39513522 39513571 -211174283 + MIR3 SINE MIR 125 173 -35 1658 64 10 5 chr2 39513762 39513966 -211173888 - AluSc SINE Alu -9 300 96 2311 109 0 0 chr2 39514084 39514387 -211173467 - AluSc SINE Alu -6 303 1 249 189 81 14 chr2 39514638 39514712 -211173142 + Charlie5 DNA MER1_type 36 114 -2498 1129 148 220 9 chr2 39514712 39514942 -211172912 + Charlie5 DNA MER1_type 2189 2369 -255 1769 93 118 38 chr2 39514942 39515231 -211172623 + AluJb SINE Alu 1 312 0 1129 148 220 9 chr2 39515231 39515337 -211172517 + Charlie5 DNA MER1_type 2369 2596 -28 1959 253 97 70 chr2 39515351 39515438 -211172416 - L1MEc LINE L1 -3522 2693 2610 2097 91 40 10 chr2 39515438 39515734 -211172120 + AluSx SINE Alu 1 305 -7 1959 253 97 70 chr2 39515734 39516019 -211171835 - L1MEc LINE L1 -3605 2610 2334 2150 101 38 0 chr2 39516019 39516307 -211171547 + AluSq SINE Alu 1 299 -14 1959 253 97 70 chr2 39516307 39516524 -211171330 - L1MEc LINE L1 -3881 2334 2124 2303 112 0 0 chr2 39516524 39516827 -211171027 - AluSp SINE Alu -10 303 1 1959 253 97 70 chr2 39516827 39517242 -211170612 - L1MEc LINE L1 -4091 2124 1722 2113 75 28 11 chr2 39517242 39517524 -211170330 - AluSc SINE Alu -22 287 1 1959 253 97 70 chr2 39517524 39518520 -211169334 - L1MEc LINE L1 -4493 1722 656 313 266 171 13 chr2 39518992 39519150 -211168704 - L1MEc LINE L1 -6157 239 57 2326 97 3 25 chr2 39519286 39519605 -211168249 - AluSx SINE Alu 0 312 1 2155 101 14 7 chr2 39519774 39520070 -211167784 + AluSq SINE Alu 1 298 -15 21 36 0 0 chr2 39520070 39520098 -211167756 + AT_rich Low_complexity Low_complexity 1 28 0 1834 174 21 37 chr2 39520774 39521154 -211166700 - L1MC1 LINE L1 -2 6331 5958 8136 29 0 0 chr2 39521881 39522916 -211164938 - L1PA3 LINE L1 0 6155 5120 2280 98 3 0 chr2 39523087 39523382 -211164472 - AluSp SINE Alu -17 296 1 2085 137 10 0 chr2 39523500 39523799 -211164055 + AluSx SINE Alu 1 302 -10 889 312 33 68 chr2 39523840 39524401 -211163453 - L2 LINE L2 -1 3312 2772 362 305 119 70 chr2 39524455 39524743 -211163111 - L2 LINE L2 -115 3157 2840 2343 140 9 12 chr2 39524743 39525079 -211162775 + MER1B DNA MER1_type 3 337 0 362 305 119 70 chr2 39525079 39525311 -211162543 - L2 LINE L2 -432 2840 2621 477 158 16 102 chr2 39525633 39525760 -211162094 - MIR SINE MIR -58 204 89 2232 98 24 0 chr2 39526937 39527232 -211160622 - AluSx SINE Alu -10 302 1 2513 122 40 8 chr2 39527512 39527865 -211159989 - THE1B LTR MaLR 0 364 1 1271 130 13 59 chr2 39528390 39528628 -211159226 - AluJb SINE Alu 0 312 86 184 234 94 62 chr2 39529132 39529196 -211158658 + L2 LINE L2 3028 3093 -220 1603 166 3 63 chr2 39529910 39530212 -211157642 - AluJb SINE Alu -28 284 1 287 167 0 154 chr2 39530473 39530551 -211157303 + MER117 DNA MER1_type 2 67 -130 1356 219 62 51 chr2 39531223 39531576 -211156278 - L1ME3 LINE L1 0 6162 5802 2190 132 0 0 chr2 39531576 39531887 -211155967 + AluSq SINE Alu 1 311 -2 1356 219 62 51 chr2 39531887 39531966 -211155888 - L1ME3 LINE L1 -360 5802 5725 2144 228 77 49 chr2 39532054 39532344 -211155510 - L1MC3 LINE L1 -50 7735 7455 2117 94 7 4 chr2 39532344 39532621 -211155233 - AluSq SINE Alu -22 291 14 2144 228 77 49 chr2 39532621 39533079 -211154775 - L1MC3 LINE L1 -330 7455 6966 2204 136 23 0 chr2 39533101 39533447 -211154407 - L1PA16 LINE L1 -9 6157 5804 1489 203 112 58 chr2 39533729 39534051 -211153803 - L1MC5 LINE L1 -27 7934 7631 2276 121 0 3 chr2 39534051 39534364 -211153490 - AluSx SINE Alu 0 312 1 1489 203 112 58 chr2 39534364 39534712 -211153142 - L1MC5 LINE L1 -330 7631 7228 300 318 185 33 chr2 39534712 39534923 -211152931 - MIR SINE MIR -10 252 10 1739 106 94 0 chr2 39535511 39535807 -211152047 - AluY SINE Alu 0 311 1 2334 228 53 30 chr2 39535816 39536510 -211151344 - L1ME3 LINE L1 -1 6161 5452 313 65 102 0 chr2 39536606 39536714 -211151140 + (TA)n Simple_repeat Simple_repeat 2 120 0 21 36 0 0 chr2 39536784 39536812 -211151042 + AT_rich Low_complexity Low_complexity 1 28 0 2262 72 14 0 chr2 39536845 39537147 -211150707 - AluSp SINE Alu 0 306 1 2159 130 0 0 chr2 39537237 39537538 -211150316 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr2 39538248 39538270 -211149584 + AT_rich Low_complexity Low_complexity 1 22 0 669 146 0 0 chr2 39538271 39538367 -211149487 - AluJo SINE Alu -23 289 194 653 202 0 0 chr2 39538376 39538485 -211149369 - AluJo SINE Alu -202 110 2 769 194 0 14 chr2 39538514 39538658 -211149196 - FLAM_A SINE Alu 0 142 1 2158 157 70 44 chr2 39538929 39539061 -211148793 - L1MB8 LINE L1 -3 6455 6328 1820 158 10 0 chr2 39539061 39539353 -211148501 + AluJo SINE Alu 1 295 -17 2158 157 70 44 chr2 39539353 39539496 -211148358 - L1MB8 LINE L1 -130 6328 5889 429 249 92 22 chr2 39539496 39539725 -211148129 - L1PA10 LINE L1 -266 5902 5658 4883 238 71 35 chr2 39539742 39539935 -211147919 - L1MB8 LINE L1 -1171 5255 5070 1972 112 23 33 chr2 39539935 39540106 -211147748 - AluSx SINE Alu -11 301 133 2306 104 0 10 chr2 39540106 39540414 -211147440 - AluSc SINE Alu -4 305 1 1972 112 23 33 chr2 39540414 39540546 -211147308 - AluSx SINE Alu -179 133 1 4883 238 71 35 chr2 39540546 39541414 -211146440 - L1MB8 LINE L1 -1356 5070 4235 2262 114 7 0 chr2 39541414 39541720 -211146134 - AluSx SINE Alu -4 308 1 4883 238 71 35 chr2 39541720 39542115 -211145739 - L1MB8 LINE L1 -2191 4235 3856 2255 104 16 3 chr2 39542115 39542422 -211145432 - AluSx SINE Alu -1 311 1 4883 238 71 35 chr2 39542422 39543620 -211144234 - L1MB8 LINE L1 -2570 3856 2424 2033 128 10 0 chr2 39543620 39543910 -211143944 - AluSx SINE Alu -19 293 1 4883 238 71 35 chr2 39543910 39544292 -211143562 - L1MB8 LINE L1 -4002 2424 2057 967 161 333 32 chr2 39544305 39544557 -211143297 - L1MCa LINE L1 -4492 2072 1897 2120 135 0 0 chr2 39544557 39544861 -211142993 - AluSx SINE Alu -8 304 1 967 161 333 32 chr2 39544861 39545050 -211142804 - L1MCa LINE L1 -4667 1897 1498 2566 238 50 69 chr2 39545050 39545480 -211142374 - L1MCa LINE L1 -4983 1062 625 545 196 161 0 chr2 39545480 39545592 -211142262 - FLAM_A SINE Alu -3 130 1 2566 238 50 69 chr2 39545592 39545805 -211142049 - L1MCa LINE L1 -5420 625 409 1023 86 0 0 chr2 39545805 39545957 -211141897 + (TG)n Simple_repeat Simple_repeat 2 153 0 2566 238 50 69 chr2 39545957 39546392 -211141462 - L1MCa LINE L1 -5636 409 4 1981 118 28 9 chr2 39546495 39546818 -211141036 - L1MB3 LINE L1 0 6183 5855 2298 75 3 7 chr2 39547280 39547572 -211140282 - AluSp SINE Alu -22 291 1 581 128 23 0 chr2 39547749 39547835 -211140019 + FRAM SINE Alu 58 145 -31 870 97 7 83 chr2 39548063 39548207 -211139647 + FLAM_C SINE Alu 1 133 0 493 193 123 9 chr2 39548451 39548565 -211139289 + L2 LINE L2 3185 3311 -2 879 176 7 14 chr2 39548686 39548834 -211139020 - FRAM SINE Alu -30 146 1 393 307 73 7 chr2 39549141 39549278 -211138576 - L2 LINE L2 -1 3312 3167 1555 148 0 0 chr2 39549637 39549866 -211137988 + AluJb SINE Alu 84 312 0 1766 94 16 101 chr2 39550373 39550704 -211137150 - AluSx SINE Alu 0 305 1 207 0 0 0 chr2 39550711 39550734 -211137120 + (TTTTTG)n Simple_repeat Simple_repeat 1 23 0 455 231 148 18 chr2 39551069 39551298 -211136556 - L1MC5 LINE L1 -44 7917 7659 2198 106 7 0 chr2 39551440 39551741 -211136113 - AluSq SINE Alu -10 303 1 192 40 0 0 chr2 39551926 39551951 -211135903 + (TC)n Simple_repeat Simple_repeat 2 26 0 1976 167 0 0 chr2 39551951 39552250 -211135604 - AluJb SINE Alu -13 299 1 2129 73 49 7 chr2 39553083 39553370 -211134484 - AluSq SINE Alu -13 300 2 808 174 65 13 chr2 39553392 39553547 -211134307 - FAM SINE Alu -13 172 10 209 269 27 121 chr2 39554794 39554943 -211132911 + MIR SINE MIR 86 220 -42 311 290 0 0 chr2 39555067 39555136 -211132718 - L2 LINE L2 0 3272 3204 2106 121 3 10 chr2 39556290 39556595 -211131259 - AluSq SINE Alu -7 306 4 905 202 5 30 chr2 39557664 39557867 -211129987 + MER20 DNA MER1_type 7 204 -15 1847 126 133 36 chr2 39558671 39558838 -211129016 - MSTA LTR MaLR 0 428 279 2269 77 13 7 chr2 39558838 39559138 -211128716 - AluSg SINE Alu -8 302 1 1847 126 133 36 chr2 39559138 39559360 -211128494 - MSTA LTR MaLR -149 279 1 1193 186 174 22 chr2 39559739 39560142 -211127712 - L1ME3A LINE L1 0 6170 5707 189 74 0 0 chr2 39560436 39560463 -211127391 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2437 67 37 0 chr2 39560640 39560937 -211126917 + AluSp SINE Alu 1 308 -5 22 0 0 0 chr2 39562782 39562804 -211125050 + AT_rich Low_complexity Low_complexity 1 22 0 6225 117 31 21 chr2 39562811 39564047 -211123807 - L1MA3 LINE L1 0 7724 6468 762 143 0 8 chr2 39564047 39564173 -211123681 - AluSg/x SINE Alu -9 301 177 243 133 0 0 chr2 39564173 39564218 -211123636 + Alu SINE Alu 257 301 0 1364 109 0 0 chr2 39564317 39564491 -211123363 - AluSq SINE Alu -139 174 1 902 143 12 0 chr2 39564492 39564660 -211123194 - L1MA3 LINE L1 -1092 6473 6304 7386 167 164 73 chr2 39564679 39564958 -211122896 - L1MA3 LINE L1 -2016 5549 5297 210 71 0 0 chr2 39564958 39564986 -211122868 + (ATTG)n Simple_repeat Simple_repeat 1 28 0 7386 167 164 73 chr2 39564986 39565999 -211121855 - L1MA3 LINE L1 -2268 5297 4377 2054 112 0 62 chr2 39565999 39566320 -211121534 - AluSx SINE Alu -11 301 1 7386 167 164 73 chr2 39566320 39567500 -211120354 - L1MA3 LINE L1 -3188 4377 3305 1081 212 14 0 chr2 39567500 39567717 -211120137 - AluJo SINE Alu -92 220 1 7386 167 164 73 chr2 39567717 39568075 -211119779 - L1MA3 LINE L1 -4260 3305 2981 1953 136 49 0 chr2 39568075 39568362 -211119492 + AluJb SINE Alu 1 301 -11 7386 167 164 73 chr2 39568362 39569186 -211118668 - L1MA3 LINE L1 -4584 2981 2233 473 130 0 0 chr2 39569186 39569255 -211118599 - AluS SINE Alu -244 69 1 7386 167 164 73 chr2 39569255 39570258 -211117596 - L1MA3 LINE L1 -5332 2233 13 2255 107 3 0 chr2 39570297 39570595 -211117259 + AluSp SINE Alu 1 299 -14 978 198 0 6 chr2 39570750 39570917 -211116937 + FRAM SINE Alu 1 165 -11 21 0 0 0 chr2 39571144 39571165 -211116689 + AT_rich Low_complexity Low_complexity 1 21 0 47 0 0 0 chr2 39572351 39572398 -211115456 + AT_rich Low_complexity Low_complexity 1 47 0 231 287 0 20 chr2 39575327 39575428 -211112426 + T-rich Low_complexity Low_complexity 4 102 0 2207 103 0 0 chr2 39577000 39577300 -211110554 - AluY SINE Alu -11 300 1 1730 159 58 28 chr2 39578858 39579222 -211108632 + THE1C LTR MaLR 1 375 0 342 301 79 22 chr2 39579651 39579819 -211108035 + MIR SINE MIR 13 192 -63 2303 120 0 0 chr2 39580353 39580653 -211107201 - AluSx SINE Alu -12 300 1 337 247 135 23 chr2 39580887 39581054 -211106800 - MIR SINE MIR -61 147 2 512 195 150 0 chr2 39581363 39581476 -211106378 - FLAM_A SINE Alu -3 130 1 208 281 115 58 chr2 39581492 39581557 -211106297 - MER5A DNA MER1_type -25 164 104 1088 74 0 7 chr2 39581557 39581706 -211106148 - L1PA5 LINE L1 -3 6151 6004 208 281 115 58 chr2 39581706 39581779 -211106075 - MER5A DNA MER1_type -85 104 18 418 231 59 21 chr2 39582273 39582459 -211105395 - LTR37B LTR ERV1 0 468 276 338 171 298 25 chr2 39582505 39582663 -211105191 - Charlie1 DNA MER1_type 0 2761 2561 1654 137 127 67 chr2 39582688 39583104 -211104750 - L1MA9 LINE L1 -83 6229 5789 292 253 11 11 chr2 39583210 39583305 -211104549 - LTR37B LTR ERV1 -366 102 8 1556 156 75 19 chr2 39583594 39583915 -211103939 - MER2 DNA MER2_type -6 339 1 527 230 53 9 chr2 39583944 39584057 -211103797 - MER5B DNA MER1_type -59 119 2 1267 313 150 32 chr2 39584063 39584949 -211102905 + L2 LINE L2 218 1208 -2106 1720 123 84 46 chr2 39586281 39586648 -211101206 + MER4B LTR ERV1 1 381 -229 810 189 142 37 chr2 39586678 39586974 -211100880 - L1MC5 LINE L1 -48 7913 7587 189 107 0 0 chr2 39587427 39587455 -211100399 + (TAG)n Simple_repeat Simple_repeat 2 29 0 242 93 0 23 chr2 39587473 39587516 -211100338 + (TTCA)n Simple_repeat Simple_repeat 2 43 0 1064 304 104 13 chr2 39587631 39588349 -211099505 - L2 LINE L2 0 3313 2528 239 286 0 0 chr2 39588437 39588500 -211099354 - MIR SINE MIR -67 141 79 2272 99 0 13 chr2 39588808 39589110 -211098744 - AluSx SINE Alu -14 298 1 1673 308 82 49 chr2 39589673 39590450 -211097404 - ERVL LTR ERVL -462 5302 4552 2254 99 0 7 chr2 39590450 39590753 -211097101 + AluSq SINE Alu 1 301 -12 1673 308 82 49 chr2 39590753 39590904 -211096950 - ERVL LTR ERVL -1212 4552 4407 2242 96 3 13 chr2 39590904 39591206 -211096648 - AluSx SINE Alu -13 299 1 1673 308 82 49 chr2 39591206 39591429 -211096425 - ERVL LTR ERVL -1357 4407 4112 728 188 78 0 chr2 39591863 39592017 -211095837 + FRAM SINE Alu 1 166 0 454 62 0 0 chr2 39591954 39592018 -211095836 + Alu SINE Alu 240 303 -9 15322 130 19 11 chr2 39592365 39592806 -211095048 + Tigger1 DNA MER2_type 1 437 -1981 6479 122 9 17 chr2 39592806 39593783 -211094071 - LTR5 LTR ERVK 0 969 1 15322 130 19 11 chr2 39593783 39594493 -211093361 + Tigger1 DNA MER2_type 437 1140 -1278 2076 104 20 17 chr2 39594493 39594790 -211093064 + AluSx SINE Alu 1 298 -14 15322 130 19 11 chr2 39594790 39596036 -211091818 + Tigger1 DNA MER2_type 1140 2418 0 442 295 49 0 chr2 39596564 39596686 -211091168 - L2 LINE L2 -2 3270 3143 2002 104 77 11 chr2 39597016 39597303 -211090551 - AluSx SINE Alu -6 306 1 306 0 0 0 chr2 39597565 39597599 -211090255 + (TG)n Simple_repeat Simple_repeat 2 35 0 279 0 0 0 chr2 39598289 39598320 -211089534 + (TG)n Simple_repeat Simple_repeat 1 31 0 201 39 0 0 chr2 39598319 39598345 -211089509 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 1969 93 3 96 chr2 39598636 39598795 -211089059 - AluSp SINE Alu -21 292 177 2442 74 0 0 chr2 39598795 39599091 -211088763 - AluY SINE Alu -14 297 2 1969 93 3 96 chr2 39599091 39599253 -211088601 - AluSp SINE Alu -136 177 1 1826 239 49 18 chr2 39599374 39599825 -211088029 + LTR40a LTR ERVL 2 466 -53 370 286 116 68 chr2 39599867 39600301 -211087553 + L1M4 LINE L1 3624 4036 -2110 2165 122 0 0 chr2 39600301 39600589 -211087265 - AluSx SINE Alu -20 292 5 370 286 116 68 chr2 39600589 39601483 -211086371 + L1M4 LINE L1 4036 5016 -1130 1854 132 68 7 chr2 39601483 39601763 -211086091 + AluSx SINE Alu 5 301 -11 419 286 49 35 chr2 39601933 39602182 -211085672 + MIR SINE MIR 3 256 -6 363 280 64 8 chr2 39603924 39604049 -211083805 - MIR3 SINE MIR -63 145 14 2198 129 46 0 chr2 39604830 39605178 -211082676 + THE1B LTR MaLR 1 364 0 2692 160 27 0 chr2 39605559 39606008 -211081846 + L1MD3 LINE L1 7534 7994 -1 513 291 71 71 chr2 39607535 39607918 -211079936 + MLT1K LTR MaLR 164 549 -39 2784 127 24 0 chr2 39607918 39608336 -211079518 + MSTA LTR MaLR 1 428 0 513 291 71 71 chr2 39608336 39608374 -211079480 + MLT1K LTR MaLR 548 585 -3 190 312 48 56 chr2 39609535 39609660 -211078194 - L2 LINE L2 -11 3302 3179 249 196 0 0 chr2 39610375 39610426 -211077428 + (TG)n Simple_repeat Simple_repeat 1 51 0 305 267 67 0 chr2 39611181 39611271 -211076583 + MIR3 SINE MIR 101 196 -12 2491 193 87 19 chr2 39611271 39611697 -211076157 - MER45B DNA AcHobo -541 1040 568 1687 178 10 23 chr2 39611697 39612006 -211075848 + AluJo SINE Alu 1 305 -7 2491 193 87 19 chr2 39612006 39612117 -211075737 - MER45B DNA AcHobo -1013 568 466 5531 118 41 14 chr2 39612302 39612317 -211075537 + L1MC1 LINE L1 5425 5438 -895 2104 140 3 3 chr2 39612317 39612624 -211075230 + AluSq SINE Alu 1 307 -6 5531 118 41 14 chr2 39612624 39613493 -211074361 + L1MC1 LINE L1 5438 6333 0 1809 150 26 23 chr2 39613501 39613692 -211074162 + AluJb SINE Alu 1 190 -122 372 22 0 0 chr2 39613692 39613737 -211074117 + (TC)n Simple_repeat Simple_repeat 2 46 0 2370 94 7 0 chr2 39613737 39614036 -211073818 - AluSx SINE Alu -10 302 2 1809 150 26 23 chr2 39614036 39614150 -211073704 + AluJb SINE Alu 189 308 -4 365 319 54 43 chr2 39614735 39615014 -211072840 + HAL1b LINE L1 59 340 -1008 1181 266 81 35 chr2 39615309 39615396 -211072458 + HAL1b LINE L1 364 446 -902 2323 106 3 0 chr2 39615396 39615698 -211072156 + AluSx SINE Alu 1 303 -9 1181 266 81 35 chr2 39615698 39616102 -211071752 + HAL1b LINE L1 446 885 -463 1135 203 32 9 chr2 39616102 39616319 -211071535 + MER58A DNA MER1_type 1 222 -2 1181 266 81 35 chr2 39616319 39616370 -211071484 + HAL1b LINE L1 885 932 -416 1834 193 0 0 chr2 39616402 39616713 -211071141 + AluJb SINE Alu 2 312 0 1267 192 54 63 chr2 39616786 39617381 -211070473 + LTR27 LTR ERV1 5 634 -2 2373 98 0 9 chr2 39618020 39618335 -211069519 + AluSx SINE Alu 1 312 0 1190 187 58 4 chr2 39618371 39618596 -211069258 - MER8 DNA MER2_type -1 238 2 189 0 0 0 chr2 39619272 39619293 -211068561 + (T)n Simple_repeat Simple_repeat 1 21 0 730 331 74 11 chr2 39619313 39619597 -211068257 - LTR16A LTR ERVL -6 444 143 3919 307 52 42 chr2 39619924 39621889 -211065965 - HERV16 LTR ERVL -438 5326 3341 1177 183 14 0 chr2 39621894 39622107 -211065747 - AluJo SINE Alu -6 306 91 4349 285 57 29 chr2 39622294 39622821 -211065033 - HERV16 LTR ERVL -1906 3090 2579 1932 200 100 32 chr2 39622821 39623291 -211064563 + MLT1D LTR MaLR 4 505 0 4349 285 57 29 chr2 39623291 39624207 -211063647 - HERV16 LTR ERVL -2417 2579 1607 505 281 27 86 chr2 39624494 39624600 -211063254 - HERV16 LTR ERVL -4752 244 133 1961 144 34 0 chr2 39624600 39624892 -211062962 + AluJo SINE Alu 1 302 -10 505 281 27 86 chr2 39624892 39625041 -211062813 - HERV16 LTR ERVL -4863 133 4 1052 288 28 6 chr2 39625044 39625367 -211062487 - LTR16A LTR ERVL 0 450 121 282 235 50 0 chr2 39625645 39625764 -211062090 + (CAGAGA)n Simple_repeat Simple_repeat 2 126 0 1427 208 134 11 chr2 39626056 39626421 -211061433 - MER66A LTR ERV1 -40 438 29 1126 234 77 15 chr2 39627157 39627310 -211060544 + MER20B DNA MER1_type 9 151 -632 2272 131 0 0 chr2 39627310 39627616 -211060238 - AluSx SINE Alu -6 306 1 1126 234 77 15 chr2 39627616 39627787 -211060067 + MER20B DNA MER1_type 151 353 -430 262 256 78 11 chr2 39628916 39629006 -211058848 - MLT1J LTR MaLR -37 474 379 633 222 56 44 chr2 39629122 39629302 -211058552 - MLT1J LTR MaLR -325 186 5 229 364 10 0 chr2 39629397 39629496 -211058358 + L2 LINE L2 2951 3050 -222 567 201 69 83 chr2 39629721 39629925 -211057929 + MIR SINE MIR 49 249 -13 184 319 29 0 chr2 39632224 39632293 -211055561 - L2 LINE L2 -15 3257 3187 290 275 120 14 chr2 39632363 39632505 -211055349 + MIR3 SINE MIR 40 196 -12 201 171 0 0 chr2 39632580 39632615 -211055239 + T-rich Low_complexity Low_complexity 1 35 0 2091 123 0 0 chr2 39632638 39632970 -211054884 - AluSx SINE Alu 0 332 1 574 246 81 104 chr2 39633269 39633712 -211054142 - L1ME3A LINE L1 -239 5931 5499 1873 156 0 28 chr2 39633713 39633811 -211054043 - AluJb SINE Alu -1 311 212 2135 182 67 36 chr2 39633811 39634288 -211053566 - LTR22B LTR ERVK 0 492 1 1873 156 0 28 chr2 39634288 39634509 -211053345 - AluJb SINE Alu -100 212 1 397 306 38 13 chr2 39634515 39634672 -211053182 - L1ME3A LINE L1 -668 5496 5336 935 304 36 20 chr2 39634739 39635243 -211052611 - L1ME3A LINE L1 -905 5241 4730 677 151 0 0 chr2 39635306 39635412 -211052442 + FLAM_C SINE Alu 2 107 -36 252 291 23 23 chr2 39636012 39636098 -211051756 + MIR SINE MIR 21 106 -156 5299 110 29 6 chr2 39636101 39637039 -211050815 - L1PB2 LINE L1 -1 6167 5176 204 294 102 61 chr2 39639868 39640113 -211047741 - L2 LINE L2 -188 3084 2830 282 218 195 23 chr2 39640515 39640653 -211047201 + MIR3 SINE MIR 37 192 -47 1860 163 0 14 chr2 39640687 39640975 -211046879 + AluSx SINE Alu 1 284 -28 2341 109 0 0 chr2 39641244 39641548 -211046306 - AluSx SINE Alu -8 304 1 1620 73 5 0 chr2 39643291 39643495 -211044359 + AluSg/x SINE Alu 101 305 -5 466 249 115 30 chr2 39643558 39643723 -211044131 + MIR SINE MIR 22 200 -62 302 276 35 0 chr2 39643725 39643841 -211044013 + (TA)n Simple_repeat Simple_repeat 2 121 0 2075 128 0 7 chr2 39643974 39644280 -211043574 - AluSg SINE Alu -6 304 1 294 95 0 0 chr2 39644280 39644322 -211043532 - AluSp/q SINE Alu -10 293 252 1801 42 0 5 chr2 39644324 39644538 -211043316 - AluY SINE Alu -98 213 1 300 71 0 0 chr2 39644538 39644580 -211043274 - AluSq SINE Alu -10 293 252 1664 83 0 9 chr2 39644582 39644798 -211043056 - AluSq SINE Alu -99 214 1 606 224 40 40 chr2 39644800 39645001 -211042853 - L1MC5 LINE L1 -32 7929 7729 2336 78 0 3 chr2 39645679 39645963 -211041891 - AluSc SINE Alu -26 283 1 924 145 0 7 chr2 39646660 39646805 -211041049 + AluJo SINE Alu 120 263 -49 25 0 0 0 chr2 39646805 39646830 -211041024 + AT_rich Low_complexity Low_complexity 1 25 0 191 106 77 19 chr2 39646872 39646976 -211040878 + (TA)n Simple_repeat Simple_repeat 2 111 0 251 304 24 40 chr2 39647147 39647272 -211040582 - L1MC/D LINE L1 -1921 5887 5765 278 224 26 13 chr2 39648225 39648301 -211039553 - MER69 DNA AcHobo 0 2526 2450 * 483 226 48 41 chr2 39648298 39648444 -211039410 - MER69 DNA AcHobo -2379 147 1 240 100 0 0 chr2 39648671 39648711 -211039143 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 2348 109 0 0 chr2 39649147 39649459 -211038395 - AluSx SINE Alu 0 312 1 297 335 126 16 chr2 39649702 39649882 -211037972 - MIR SINE MIR -48 214 11 3127 123 9 11 chr2 39649882 39650347 -211037507 + MER4C LTR ERV1 2 465 0 2417 82 6 13 chr2 39650368 39650683 -211037171 - AluSp SINE Alu 0 313 1 533 228 6 100 chr2 39650841 39651021 -211036833 + MER5A DNA MER1_type 21 183 -6 425 264 66 0 chr2 39651032 39651138 -211036716 - MER94 DNA DNA -1 133 21 198 71 0 0 chr2 39651410 39651438 -211036416 + (TC)n Simple_repeat Simple_repeat 1 28 0 253 325 71 0 chr2 39651483 39651637 -211036217 - L1MC5 LINE L1 -536 7425 7261 * 260 293 75 55 chr2 39651609 39652011 -211035843 - L1MC4 LINE L1 -580 7462 7044 1569 125 129 8 chr2 39652011 39652290 -211035564 - AluSg1 SINE Alu 0 309 1 260 293 75 55 chr2 39652290 39652351 -211035503 - L1MC4 LINE L1 -998 7044 6986 270 0 0 0 chr2 39652585 39652615 -211035239 + (T)n Simple_repeat Simple_repeat 1 30 0 1153 112 0 62 chr2 39652808 39652987 -211034867 + AluSq SINE Alu 3 170 -143 291 106 21 0 chr2 39653087 39653134 -211034720 - Alu SINE Alu -255 48 1 663 100 60 0 chr2 39653134 39653234 -211034620 + L1MA2 LINE L1 6199 6304 0 27 0 0 0 chr2 39653308 39653335 -211034519 + AT_rich Low_complexity Low_complexity 1 27 0 1082 243 56 7 chr2 39653519 39653807 -211034047 + LTR16A LTR ERVL 18 319 -131 213 39 0 0 chr2 39653807 39653833 -211034021 + (TTCCC)n Simple_repeat Simple_repeat 2 27 0 202 222 44 0 chr2 39654245 39654290 -211033564 + MIR SINE MIR 108 154 -108 2618 183 9 59 chr2 39654722 39654920 -211032934 + L1MB4 LINE L1 5630 5836 -344 2105 107 0 74 chr2 39654920 39655256 -211032598 + AluSx SINE Alu 1 311 -1 2618 183 9 59 chr2 39655256 39655637 -211032217 + L1MB4 LINE L1 5836 6180 0 346 129 100 14 chr2 39655654 39655724 -211032130 + L1MB8 LINE L1 6103 6178 0 603 265 73 39 chr2 39656335 39656595 -211031259 - MER102a DNA MER1_type -1 329 61 1850 147 0 11 chr2 39656706 39656985 -211030869 + AluSx SINE Alu 1 276 -36 816 159 0 23 chr2 39656985 39657117 -211030737 + AluSg/x SINE Alu 176 304 -8 239 236 125 0 chr2 39657525 39657597 -211030257 + MIR SINE MIR 112 192 -70 1710 172 3 3 chr2 39657606 39657902 -211029952 + AluSx SINE Alu 1 296 -16 1061 61 0 8 chr2 39657913 39658045 -211029809 - THE1A LTR MaLR -224 131 1 333 200 46 0 chr2 39658045 39658107 -211029747 - Charlie5 DNA MER1_type -2542 70 6 244 214 18 18 chr2 39658111 39658167 -211029687 + L2 LINE L2 3176 3231 -41 1272 107 0 0 chr2 39658569 39658738 -211029116 + L1PA10 LINE L1 6000 6168 0 243 250 117 78 chr2 39658874 39659002 -211028852 - MIR SINE MIR -3 259 127 2177 136 0 0 chr2 39659154 39659463 -211028391 - AluSx SINE Alu -3 309 1 265 164 149 15 chr2 39659639 39659706 -211028148 - LTR67 LTR ERVL -2 555 480 932 130 86 19 chr2 39660568 39660730 -211027124 - AluSg/x SINE Alu -12 298 126 758 118 10 0 chr2 39661153 39661255 -211026599 - AluSp SINE Alu -209 104 2 3845 135 42 0 chr2 39661398 39661977 -211025877 + LTR26 LTR ERV1 1 603 0 215 279 135 19 chr2 39662080 39662184 -211025670 - L2 LINE L2 -7 3265 3150 2134 120 3 16 chr2 39662734 39663051 -211024803 - AluSq SINE Alu 0 313 1 1116 194 28 5 chr2 39663088 39663299 -211024555 - MER20 DNA MER1_type 0 219 4 833 278 161 54 chr2 39665522 39665968 -211021886 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 39666290 39666314 -211021540 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1789 151 0 14 chr2 39666314 39666598 -211021256 - AluJb SINE Alu -32 280 1 1339 202 148 20 chr2 39667243 39667594 -211020260 + MSTD LTR MaLR 1 396 0 1102 308 59 53 chr2 39667652 39668546 -211019308 + HAL1 LINE L1 12 911 -1596 420 313 170 34 chr2 39668675 39669116 -211018738 - MLT1J LTR MaLR -10 501 1 3079 119 2 5 chr2 39669353 39669783 -211018071 + L1PA15 LINE L1 5724 6152 -13 2434 51 0 3 chr2 39670015 39670307 -211017547 + AluY SINE Alu 1 291 -20 382 178 178 9 chr2 39670447 39670554 -211017300 + L2 LINE L2 3187 3311 -2 1074 82 7 0 chr2 39671341 39671476 -211016378 + AluY SINE Alu 1 136 -175 2101 114 10 7 chr2 39672105 39672402 -211015452 + AluSx SINE Alu 1 298 -14 246 294 200 0 chr2 39672802 39672887 -211014967 - L3b LINE CR1 -140 1443 1342 305 228 173 0 chr2 39672964 39673074 -211014780 + MIR SINE MIR 10 135 -73 2021 117 57 0 chr2 39673923 39674206 -211013648 - AluSx SINE Alu -13 299 1 1177 186 0 0 chr2 39674784 39674972 -211012882 + MER5A DNA MER1_type 2 189 0 2206 122 0 10 chr2 39675414 39675718 -211012136 + AluSx SINE Alu 1 301 -11 425 214 0 11 chr2 39675748 39675837 -211012017 + MLT1A1 LTR MaLR 1 88 -507 2096 210 71 40 chr2 39675895 39675928 -211011926 - L1ME LINE L1 -378 5788 5757 1558 169 28 31 chr2 39675928 39676218 -211011636 - AluJo SINE Alu -23 289 1 2096 210 71 40 chr2 39676218 39676486 -211011368 - L1ME LINE L1 -409 5757 5499 2017 130 19 19 chr2 39676486 39676793 -211011061 - AluSx SINE Alu -5 307 1 2096 210 71 40 chr2 39676793 39677497 -211010357 - L1ME LINE L1 -667 5499 4749 1366 158 59 4 chr2 39677500 39677753 -211010101 + MLT1A1 LTR MaLR 98 364 -1 1270 159 24 99 chr2 39677756 39678063 -211009791 - L1ME LINE L1 -1432 4714 4440 2090 136 0 13 chr2 39678063 39678379 -211009475 - AluSx SINE Alu 0 312 1 1270 159 24 99 chr2 39678379 39678454 -211009400 - L1ME LINE L1 -1706 4440 4361 1186 289 123 53 chr2 39678463 39679251 -211008603 - HAL1 LINE L1 -1447 1060 218 834 211 48 14 chr2 39679577 39679724 -211008130 - AluJ SINE Alu -19 293 142 333 233 27 27 chr2 39679724 39679797 -211008057 + FLAM_A SINE Alu 47 119 -14 782 177 15 0 chr2 39679797 39679927 -211007927 - AluJ SINE Alu -170 132 1 623 336 62 17 chr2 39680550 39680791 -211007063 + MIR SINE MIR 11 262 0 421 313 26 26 chr2 39680879 39681189 -211006665 + L1M4 LINE L1 4135 4444 -1702 1901 222 70 13 chr2 39681193 39681648 -211006206 - MLT1E2 LTR MaLR -133 493 13 405 329 190 5 chr2 39681663 39681879 -211005975 + MIR SINE MIR 7 262 0 475 219 189 30 chr2 39681889 39682090 -211005764 - L3 LINE CR1 -737 840 608 295 306 22 60 chr2 39682335 39682469 -211005385 - MIR SINE MIR -111 151 23 812 94 0 19 chr2 39683265 39683371 -211004483 - FLAM_C SINE Alu -18 125 22 1619 176 37 0 chr2 39683476 39683748 -211004106 - AluJb SINE Alu -30 282 1 1025 192 0 6 chr2 39683773 39683940 -211003914 + FAM SINE Alu 1 166 -9 411 260 52 38 chr2 39684209 39684372 -211003482 - MIR SINE MIR -63 145 2 1746 145 34 0 chr2 39684691 39684953 -211002901 - AluJo SINE Alu -23 289 19 426 226 175 7 chr2 39685746 39685883 -211001971 - MIR3 SINE MIR -47 161 2 745 166 94 2 chr2 39687179 39687387 -211000467 - L1MB5 LINE L1 0 6180 5958 226 227 61 30 chr2 39688148 39688214 -210999640 + MER5B DNA MER1_type 82 149 -29 671 93 90 0 chr2 39688879 39689007 -210998847 + L1MA8 LINE L1 6128 6284 -7 777 174 16 8 chr2 39689120 39689241 -210998613 + FLAM_C SINE Alu 6 127 -16 2494 59 7 7 chr2 39689330 39689634 -210998220 + AluY SINE Alu 5 308 -3 1219 187 109 50 chr2 39690065 39690662 -210997192 - MER20B DNA MER1_type -61 722 2 27 0 0 0 chr2 39692473 39692500 -210995354 + AT_rich Low_complexity Low_complexity 1 27 0 311 217 56 77 chr2 39692778 39692921 -210994933 + L1 LINE L1 4873 5012 -1134 1824 115 24 0 chr2 39693995 39694247 -210993607 + AluSx SINE Alu 55 312 0 298 269 128 0 chr2 39694283 39694361 -210993493 + L2 LINE L2 3187 3274 -39 1577 161 6 70 chr2 39695028 39695358 -210992496 + AluJo SINE Alu 1 309 -3 371 244 33 46 chr2 39695375 39695550 -210992304 - L1MC4 LINE L1 0 8042 7751 2166 99 3 3 chr2 39695705 39695997 -210991857 + AluSg SINE Alu 16 307 -3 469 296 57 71 chr2 39696063 39696305 -210991549 + L1MC4a LINE L1 5419 5663 -2145 945 119 0 15 chr2 39696305 39696439 -210991415 + FLAM_C SINE Alu 1 132 -1 469 296 57 71 chr2 39696439 39696692 -210991162 + L1MC4a LINE L1 5663 5907 -1901 2131 119 3 41 chr2 39696700 39697019 -210990835 - AluSx SINE Alu -5 307 1 562 233 72 28 chr2 39697213 39697393 -210990461 + MLT1F1 LTR MaLR 32 219 -323 1179 223 16 0 chr2 39697419 39697661 -210990193 + MLT1F1 LTR MaLR 322 567 0 26 0 0 0 chr2 39699361 39699387 -210988467 + AT_rich Low_complexity Low_complexity 1 26 0 292 304 71 9 chr2 39699729 39699841 -210988013 + MIR SINE MIR 33 151 -111 482 282 106 39 chr2 39699863 39700118 -210987736 - L2 LINE L2 0 3313 3042 444 171 0 0 chr2 39700293 39700363 -210987491 - MER44D DNA MER2_type 0 609 540 1709 161 13 26 chr2 39700364 39700669 -210987185 + AluJo SINE Alu 3 303 -9 1175 128 111 4 chr2 39700759 39700994 -210986860 - MER44D DNA MER2_type -79 530 1 234 0 0 0 chr2 39701816 39701842 -210986012 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr2 39705641 39705662 -210982192 + AT_rich Low_complexity Low_complexity 1 21 0 203 61 30 0 chr2 39706142 39706175 -210981679 + (CA)n Simple_repeat Simple_repeat 2 35 0 483 277 174 96 chr2 39708217 39708664 -210979190 - L3 LINE CR1 -23 1554 1073 267 264 286 14 chr2 39708754 39708894 -210978960 + MIR3 SINE MIR 16 193 -15 828 45 0 27 chr2 39708910 39709055 -210978799 + L1PA3 LINE L1 6040 6155 0 21 71 0 0 chr2 39709327 39709369 -210978485 + AT_rich Low_complexity Low_complexity 1 42 0 2220 94 13 3 chr2 39711915 39712213 -210975641 - AluSc SINE Alu -8 301 1 1555 123 186 4 chr2 39712241 39712494 -210975360 + AluSq SINE Alu 1 299 -14 26 36 0 36 chr2 39713644 39713674 -210974180 + AT_rich Low_complexity Low_complexity 1 30 -23 1693 187 10 3 chr2 39713674 39713963 -210973891 - AluJb SINE Alu -21 291 1 26 36 0 36 chr2 39713963 39713987 -210973867 + AT_rich Low_complexity Low_complexity 30 53 0 27 62 0 0 chr2 39714506 39714554 -210973300 + AT_rich Low_complexity Low_complexity 1 48 0 2271 68 0 0 chr2 39715629 39715909 -210971945 - AluY SINE Alu -16 295 16 260 262 48 0 chr2 39716876 39716960 -210970894 + MIR SINE MIR 175 262 0 1923 134 71 85 chr2 39717359 39717793 -210970061 + MSTA LTR MaLR 1 428 0 2282 100 7 3 chr2 39717871 39718171 -210969683 + AluSg SINE Alu 1 301 -9 500 193 0 12 chr2 39718365 39718448 -210969406 + FLAM_A SINE Alu 2 83 -59 1335 198 21 25 chr2 39720340 39720623 -210967231 + AluJo SINE Alu 16 297 -15 2340 97 0 0 chr2 39721297 39721596 -210966258 + AluSx SINE Alu 1 299 -13 21 57 0 0 chr2 39721709 39721744 -210966110 + AT_rich Low_complexity Low_complexity 1 35 0 1558 129 98 4 chr2 39723221 39723485 -210964369 + AluSg1 SINE Alu 11 299 -10 2178 92 6 16 chr2 39723495 39723809 -210964045 + AluY SINE Alu 1 311 0 447 214 47 120 chr2 39723853 39724170 -210963684 + L1MC4 LINE L1 7688 7981 -61 24 67 0 0 chr2 39724181 39724226 -210963628 + AT_rich Low_complexity Low_complexity 1 45 0 1885 147 35 3 chr2 39724267 39724552 -210963302 + AluSx SINE Alu 1 294 -18 1885 136 19 16 chr2 39724595 39724903 -210962951 + AluSg SINE Alu 1 309 -1 29 0 0 0 chr2 39725081 39725110 -210962744 + AT_rich Low_complexity Low_complexity 1 29 0 2312 69 3 0 chr2 39725163 39725453 -210962401 + AluSx SINE Alu 1 291 -21 1816 152 21 3 chr2 39725868 39726158 -210961696 - AluSx SINE Alu -17 295 1 29 28 0 0 chr2 39726614 39726650 -210961204 + AT_rich Low_complexity Low_complexity 1 36 0 448 283 45 40 chr2 39726803 39726980 -210960874 - L3 LINE CR1 -291 1286 1109 2387 69 3 7 chr2 39727284 39727587 -210960267 - AluSg1 SINE Alu -7 302 1 458 212 22 120 chr2 39727917 39728101 -210959753 + MLT1K LTR MaLR 391 556 -32 192 273 182 0 chr2 39728188 39728254 -210959600 + L2 LINE L2 3230 3307 -6 250 271 82 14 chr2 39729958 39730039 -210957815 - MIR3 SINE MIR -47 161 75 1663 125 6 78 chr2 39730045 39730365 -210957489 + AluJb SINE Alu 1 297 -15 23 0 0 0 chr2 39730900 39730923 -210956931 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 39731483 39731510 -210956344 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr2 39731761 39731785 -210956069 + GC_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr2 39732053 39732090 -210955764 + GC_rich Low_complexity Low_complexity 1 37 0 238 343 86 0 chr2 39733556 39733661 -210954193 + L2 LINE L2 3155 3268 -4 35 0 0 0 chr2 39734059 39734094 -210953760 + AT_rich Low_complexity Low_complexity 1 35 0 248 304 139 0 chr2 39735491 39735570 -210952284 - L2 LINE L2 -44 3228 3139 490 245 30 114 chr2 39735645 39735798 -210952056 - MIR SINE MIR -31 231 103 1612 181 0 4 chr2 39735798 39736068 -210951786 + AluJb SINE Alu 41 309 -3 490 245 30 114 chr2 39736068 39736151 -210951703 - MIR SINE MIR -159 103 15 1817 167 0 25 chr2 39736249 39736567 -210951287 - AluJo SINE Alu -2 310 1 1964 150 33 0 chr2 39736714 39737014 -210950840 - AluSx SINE Alu -2 310 1 2502 51 0 0 chr2 39737718 39738014 -210949840 - AluY SINE Alu -15 296 1 21 0 0 0 chr2 39738061 39738082 -210949772 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 39738124 39738162 -210949692 + AT_rich Low_complexity Low_complexity 1 38 0 2770 63 3 28 chr2 39738774 39739010 -210948844 - THE1A LTR MaLR 0 355 130 2085 154 3 0 chr2 39739010 39739321 -210948533 + AluSx SINE Alu 1 312 0 2770 63 3 28 chr2 39739321 39739448 -210948406 - THE1A LTR MaLR -225 130 1 280 210 48 0 chr2 39739448 39739510 -210948344 - Charlie5 DNA MER1_type -2542 70 6 242 214 18 18 chr2 39739514 39739570 -210948284 + L2 LINE L2 3176 3231 -41 1186 107 0 0 chr2 39739972 39740141 -210947713 + L1PA10 LINE L1 6000 6168 0 255 250 117 78 chr2 39740277 39740405 -210947449 - MIR SINE MIR -3 259 127 2195 136 0 0 chr2 39740557 39740866 -210946988 - AluSx SINE Alu -3 309 1 236 172 52 17 chr2 39741042 39741100 -210946754 - LTR67 LTR ERVL -2 555 496 931 130 86 19 chr2 39741971 39742133 -210945721 - AluSg/x SINE Alu -12 298 126 648 117 19 10 chr2 39742555 39742658 -210945196 - AluSp SINE Alu -209 104 1 3557 131 42 0 chr2 39742800 39743379 -210944475 + LTR26 LTR ERV1 1 603 0 219 269 135 19 chr2 39743482 39743586 -210944268 - L2 LINE L2 -7 3265 3150 2139 120 3 16 chr2 39744136 39744453 -210943401 - AluSq SINE Alu 0 313 1 1026 194 28 5 chr2 39744490 39744701 -210943153 - MER20B DNA MER1_type 0 219 4 833 278 161 54 chr2 39746923 39747369 -210940485 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 39747690 39747714 -210940140 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1789 151 0 14 chr2 39747714 39747998 -210939856 - AluJb SINE Alu -32 280 1 1339 202 148 20 chr2 39748643 39748994 -210938860 + MSTD LTR MaLR 1 396 0 1123 306 59 53 chr2 39749052 39749946 -210937908 + HAL1 LINE L1 12 911 -1596 217 202 0 36 chr2 39750299 39750383 -210937471 + T-rich Low_complexity Low_complexity 4 84 0 237 343 86 0 chr2 39751618 39751723 -210936131 + L2 LINE L2 3155 3268 -4 35 0 0 0 chr2 39752121 39752156 -210935698 + AT_rich Low_complexity Low_complexity 1 35 0 248 304 139 0 chr2 39753553 39753632 -210934222 - L2 LINE L2 -44 3228 3139 497 248 25 113 chr2 39753707 39753860 -210933994 - MIR SINE MIR -31 231 105 1590 181 0 4 chr2 39753860 39754130 -210933724 + AluJb SINE Alu 41 309 -3 497 248 25 113 chr2 39754130 39754214 -210933640 - MIR SINE MIR -157 105 15 1795 167 0 25 chr2 39754312 39754630 -210933224 - AluJo SINE Alu -2 310 1 1946 150 33 0 chr2 39754777 39755077 -210932777 - AluSx SINE Alu -2 310 1 2529 51 0 0 chr2 39755781 39756077 -210931777 - AluY SINE Alu -15 296 1 21 0 0 0 chr2 39756124 39756145 -210931709 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 39756187 39756225 -210931629 + AT_rich Low_complexity Low_complexity 1 38 0 2864 61 3 66 chr2 39756837 39757073 -210930781 - THE1A LTR MaLR 0 355 150 2089 138 3 0 chr2 39757073 39757369 -210930485 + AluSx SINE Alu 1 297 -15 2864 61 3 66 chr2 39757369 39757511 -210930343 - THE1A LTR MaLR -205 150 1 305 210 48 0 chr2 39757511 39757573 -210930281 - Charlie5 DNA MER1_type -2542 70 6 244 214 18 18 chr2 39757577 39757633 -210930221 + L2 LINE L2 3176 3231 -41 1272 107 0 0 chr2 39758035 39758204 -210929650 + L1PA10 LINE L1 6000 6168 0 243 250 117 78 chr2 39758340 39758468 -210929386 - MIR SINE MIR -3 259 127 2177 136 0 0 chr2 39758620 39758929 -210928925 - AluSx SINE Alu -3 309 1 265 164 149 15 chr2 39759105 39759172 -210928682 - LTR67 LTR ERVL -2 555 480 932 130 86 19 chr2 39760034 39760196 -210927658 - AluSg/x SINE Alu -12 300 128 758 118 10 0 chr2 39760618 39760720 -210927134 - AluSp SINE Alu -209 104 2 3845 135 42 0 chr2 39760863 39761442 -210926412 + LTR26 LTR ERV1 1 603 0 215 279 135 19 chr2 39761545 39761649 -210926205 - L2 LINE L2 -7 3265 3150 2134 120 3 16 chr2 39762199 39762516 -210925338 - AluSq SINE Alu 0 313 1 1116 194 28 5 chr2 39762553 39762764 -210925090 - MER20 DNA MER1_type 0 219 4 833 278 161 54 chr2 39764987 39765433 -210922421 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 39765754 39765778 -210922076 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1789 151 0 14 chr2 39765778 39766062 -210921792 - AluJb SINE Alu -32 280 1 1339 202 148 20 chr2 39766707 39767058 -210920796 + MSTD LTR MaLR 1 396 0 1123 306 59 53 chr2 39767116 39768010 -210919844 + HAL1 LINE L1 12 911 -1596 420 313 170 34 chr2 39768139 39768580 -210919274 - MLT1J LTR MaLR -10 501 1 3079 119 2 5 chr2 39768817 39769247 -210918607 + L1PA15 LINE L1 5724 6152 -13 2434 51 0 3 chr2 39769479 39769771 -210918083 + AluY SINE Alu 1 291 -20 382 178 178 9 chr2 39769911 39770018 -210917836 + L2 LINE L2 3187 3311 -2 2428 75 0 0 chr2 39770805 39771100 -210916754 + AluY SINE Alu 1 295 -16 2152 116 0 7 chr2 39771130 39771431 -210916423 + AluSx SINE Alu 6 304 -8 29 60 0 0 chr2 39771511 39771561 -210916293 + AT_rich Low_complexity Low_complexity 1 50 0 2516 30 40 0 chr2 39771945 39772244 -210915610 - AluY SINE Alu 0 311 1 316 305 0 0 chr2 39772739 39772821 -210915033 - MIR SINE MIR -28 234 153 2333 115 0 3 chr2 39773101 39773414 -210914440 - AluSx SINE Alu 0 312 1 184 329 31 112 chr2 39773417 39773578 -210914276 - L2 LINE L2 0 3272 3125 2137 146 24 26 chr2 39774289 39774808 -210913046 - MLT2A2 LTR ERVL 0 554 1 316 229 49 25 chr2 39775107 39775229 -210912625 + MLT1L LTR MaLR 489 613 -2 563 274 19 42 chr2 39775350 39775565 -210912289 - HAL1 LINE L1 -1596 911 702 610 237 85 15 chr2 39775833 39776025 -210911829 - MIR SINE MIR 0 262 55 2203 106 0 0 chr2 39776025 39776335 -210911519 - AluSg SINE Alu 0 310 1 610 237 85 15 chr2 39776335 39776354 -210911500 - MIR SINE MIR -207 55 39 617 263 107 32 chr2 39776361 39776734 -210911120 + L1ME LINE L1 593 993 -5126 801 157 8 22 chr2 39776791 39776925 -210910929 + AluJo SINE Alu 3 134 -178 307 228 0 51 chr2 39776930 39777009 -210910845 + L1ME LINE L1 985 1059 -5060 333 298 8 16 chr2 39777031 39777152 -210910702 + L1ME LINE L1 4025 4144 -1985 302 307 64 7 chr2 39777233 39777373 -210910481 + L1ME LINE L1 4268 4415 -1714 1888 161 62 4 chr2 39777407 39777829 -210910025 - MLT1D LTR MaLR 0 505 1 1886 159 7 0 chr2 39777857 39778159 -210909695 - AluJb SINE Alu -8 304 1 499 295 66 19 chr2 39778160 39778418 -210909436 + L1ME LINE L1 4492 4761 -1368 276 245 75 32 chr2 39778649 39778743 -210909111 + L1ME3A LINE L1 5985 6082 -88 2170 120 0 20 chr2 39778760 39779060 -210908794 - AluSx SINE Alu -18 294 1 27 0 0 0 chr2 39779370 39779397 -210908457 + AT_rich Low_complexity Low_complexity 1 27 0 368 313 30 0 chr2 39779448 39779579 -210908275 + L1ME LINE L1 5512 5646 -458 241 185 37 0 chr2 39779976 39780030 -210907824 - HsTC2 DNA Tc2 -1842 56 1 2174 96 4 0 chr2 39780138 39780461 -210907393 - AluSx SINE Alu 0 324 1 620 280 108 21 chr2 39780542 39780931 -210906923 - L1MC4a LINE L1 -1689 6119 5697 2473 55 0 0 chr2 39781082 39781372 -210906482 + AluY SINE Alu 4 293 -18 2218 133 3 23 chr2 39781390 39781774 -210906080 - L1PA16 LINE L1 -3 6165 5812 1487 177 45 15 chr2 39782925 39783191 -210904663 - AluJo SINE Alu -27 285 12 1943 162 0 0 chr2 39783553 39783855 -210903999 + AluJb SINE Alu 5 306 -6 630 175 167 0 chr2 39784326 39784440 -210903414 + FLAM_C SINE Alu 1 133 0 1259 103 185 13 chr2 39784445 39784677 -210903177 + MSTA LTR MaLR 157 428 0 2430 57 7 0 chr2 39784915 39785214 -210902640 + AluY SINE Alu 1 301 -10 652 167 26 22 chr2 39785223 39785341 -210902513 + GA-rich Low_complexity Low_complexity 1 117 -423 2305 71 6 6 chr2 39785341 39785652 -210902202 + AluY SINE Alu 1 311 0 652 167 26 22 chr2 39785652 39785761 -210902093 + GA-rich Low_complexity Low_complexity 117 540 0 26 30 0 0 chr2 39785997 39786030 -210901824 + AT_rich Low_complexity Low_complexity 1 33 0 203 283 0 9 chr2 39786448 39786554 -210901300 + GA-rich Low_complexity Low_complexity 3 107 0 2309 84 3 0 chr2 39787039 39787336 -210900518 + AluSx SINE Alu 1 298 -14 1196 136 57 4 chr2 39787840 39788068 -210899786 + L1MA8 LINE L1 6029 6268 -23 65 0 0 0 chr2 39788103 39788168 -210899686 + AT_rich Low_complexity Low_complexity 1 65 0 2141 107 0 0 chr2 39788170 39788451 -210899403 + AluSx SINE Alu 11 291 -21 2180 123 0 0 chr2 39788452 39788782 -210899072 + AluSx SINE Alu 1 312 0 449 250 87 44 chr2 39788898 39789192 -210898662 + L1ME3A LINE L1 5590 5891 -230 620 176 130 0 chr2 39789219 39789327 -210898527 + FLAM_A SINE Alu 1 122 -11 263 121 17 0 chr2 39789359 39789417 -210898437 + (TA)n Simple_repeat Simple_repeat 1 59 0 750 113 0 0 chr2 39789560 39789657 -210898197 + AluS SINE Alu 2 98 -215 1145 124 12 0 chr2 39789657 39789818 -210898036 - AluSx SINE Alu -139 173 11 4344 126 19 76 chr2 39789936 39791265 -210896589 - pTR5 LTR ERV1 0 2468 1524 2468 90 0 0 chr2 39791856 39792168 -210895686 - AluSq SINE Alu -1 312 1 1086 153 22 40 chr2 39792510 39792738 -210895116 + L1MB8 LINE L1 5955 6178 0 2595 40 0 3 chr2 39792748 39793051 -210894803 + AluY SINE Alu 1 302 -9 1866 110 62 4 chr2 39793197 39793470 -210894384 + AluSq SINE Alu 2 290 -23 448 273 57 106 chr2 39793633 39793970 -210893884 + MLT1J LTR MaLR 118 437 -74 2364 91 3 0 chr2 39793970 39794268 -210893586 - AluSp SINE Alu -14 299 1 448 273 57 106 chr2 39794268 39794297 -210893557 + MLT1J LTR MaLR 437 466 -45 1836 142 62 0 chr2 39794347 39794636 -210893218 + AluJb SINE Alu 1 307 -5 241 342 117 41 chr2 39795022 39795132 -210892722 - L2 LINE L2 -450 2864 2764 2424 96 0 0 chr2 39795132 39795444 -210892410 + AluSx SINE Alu 1 312 0 241 342 117 41 chr2 39795444 39795599 -210892255 - L2 LINE L2 -550 2764 2579 3518 129 2 4 chr2 39795635 39796131 -210891723 - LOR1a LTR ERV1 -2 495 1 1705 140 0 0 chr2 39796737 39797002 -210890852 + AluSx SINE Alu 37 301 -11 1866 120 40 7 chr2 39797222 39797522 -210890332 - AluSx SINE Alu -2 310 1 321 291 243 19 chr2 39798629 39798839 -210889015 + MIR SINE MIR 6 262 0 220 278 19 0 chr2 39799065 39799119 -210888735 - MER5A DNA MER1_type -5 184 130 2358 76 3 0 chr2 39799126 39799428 -210888426 + AluSp SINE Alu 1 303 -10 2011 130 7 0 chr2 39799438 39799745 -210888109 + AluSq SINE Alu 1 309 -4 2068 126 0 0 chr2 39799753 39800054 -210887800 + AluSx SINE Alu 1 301 -11 1191 198 118 1 chr2 39800085 39800489 -210887365 + LTR54 LTR ERV1 1 466 -32 1513 170 14 54 chr2 39800489 39800617 -210887237 + AluJo SINE Alu 1 133 -179 1770 141 16 29 chr2 39800617 39800923 -210886931 - AluJo SINE Alu -10 302 1 1513 170 14 54 chr2 39800923 39801088 -210886766 + AluJo SINE Alu 133 282 -30 2622 238 50 26 chr2 39801108 39801786 -210886068 + MER21B LTR ERV1 63 756 -107 1481 178 29 61 chr2 39802532 39802909 -210884945 - MLT1A1 LTR MaLR 0 365 1 690 241 114 93 chr2 39803908 39804103 -210883751 + MLT1J LTR MaLR 1 190 -321 2064 134 0 0 chr2 39804103 39804416 -210883438 + AluSq SINE Alu 1 313 0 690 241 114 93 chr2 39804416 39804606 -210883248 + MLT1J LTR MaLR 190 394 -117 1112 237 107 26 chr2 39804635 39804943 -210882911 + LTR40c LTR ERVL 45 377 -88 666 280 78 69 chr2 39804953 39805403 -210882451 - L1ME3A LINE L1 -222 5948 5495 455 204 154 37 chr2 39805406 39805568 -210882286 - L2 LINE L2 -2 3311 3131 1997 108 56 0 chr2 39805571 39805725 -210882129 - AluSx SINE Alu -8 304 160 2053 89 28 0 chr2 39805725 39806016 -210881838 - AluSx SINE Alu -9 303 5 1997 108 56 0 chr2 39806016 39806149 -210881705 - AluSx SINE Alu -152 160 1 402 286 104 39 chr2 39806396 39806550 -210881304 + MIR SINE MIR 13 176 -86 335 303 123 0 chr2 39806640 39806762 -210881092 - MIR SINE MIR -112 150 14 281 258 0 30 chr2 39806792 39806858 -210880996 - L2 LINE L2 -4 3309 3246 361 306 102 0 chr2 39807008 39807116 -210880738 + L2 LINE L2 3148 3266 -6 2021 123 7 0 chr2 39807293 39807595 -210880259 + AluSx SINE Alu 1 304 -8 1793 141 0 4 chr2 39807668 39807969 -210879885 - AluSx SINE Alu 0 312 13 1524 202 0 0 chr2 39808042 39808334 -210879520 + AluJo SINE Alu 1 292 -20 26 0 0 67 chr2 39808335 39808358 -210879496 + AT_rich Low_complexity Low_complexity 1 21 -21 1999 98 7 3 chr2 39808358 39808644 -210879210 + AluSg SINE Alu 1 287 -23 26 0 0 67 chr2 39808644 39808665 -210879189 + AT_rich Low_complexity Low_complexity 21 42 0 2030 106 18 0 chr2 39808673 39808957 -210878897 + AluSx SINE Alu 1 289 -23 1879 157 0 16 chr2 39809278 39809453 -210878401 - AluJb SINE Alu -4 308 139 2248 79 7 0 chr2 39809453 39809743 -210878111 - AluSq SINE Alu -21 292 1 1879 157 0 16 chr2 39809743 39809880 -210877974 - AluJb SINE Alu -173 139 1 1970 110 3 30 chr2 39810253 39810554 -210877300 - AluSx SINE Alu -19 293 1 593 294 29 0 chr2 39811454 39811624 -210876230 + MER5A DNA MER1_type 1 175 -14 188 250 0 0 chr2 39811719 39811767 -210876087 + L2 LINE L2 3262 3309 -4 2074 42 7 88 chr2 39812085 39812416 -210875438 - AluY SINE Alu 0 306 1 206 278 167 0 chr2 39813800 39813854 -210874000 - L2 LINE L2 -76 3196 3134 1527 96 0 10 chr2 39814141 39814350 -210873504 + AluSg/x SINE Alu 82 288 -24 398 88 0 35 chr2 39814406 39814463 -210873391 - AluSq/x SINE Alu -151 152 98 1174 93 6 0 chr2 39814463 39814624 -210873230 + AluSg/x SINE Alu 132 293 -17 2017 125 93 63 chr2 39814626 39814964 -210872890 + MER39 LTR ERV1 258 611 -96 917 185 0 12 chr2 39814964 39815126 -210872728 - FRAM SINE Alu -6 160 1 2017 125 93 63 chr2 39815126 39815186 -210872668 + MER39 LTR ERV1 611 668 -39 272 98 24 0 chr2 39815292 39815333 -210872521 - Alu SINE Alu -260 42 1 701 235 266 11 chr2 39815374 39815595 -210872259 - L2 LINE L2 -2304 1010 847 1935 130 0 7 chr2 39815595 39815888 -210871966 + AluJb SINE Alu 1 291 -21 701 235 266 11 chr2 39815888 39816019 -210871835 - L2 LINE L2 -2467 847 568 1784 256 106 20 chr2 39816316 39816855 -210870999 + MLT1G1 LTR MaLR 1 585 -10 225 0 0 0 chr2 39816972 39816997 -210870857 + (T)n Simple_repeat Simple_repeat 1 25 0 189 114 86 0 chr2 39817092 39817127 -210870727 - MIR SINE MIR -7 255 218 1504 151 37 37 chr2 39817184 39817482 -210870372 - AluJb SINE Alu -14 298 1 2171 114 3 0 chr2 39817620 39817919 -210869935 - AluSq SINE Alu -13 300 1 2198 102 0 0 chr2 39817929 39818222 -210869632 - AluSg1 SINE Alu -16 293 1 22 35 0 0 chr2 39818769 39818798 -210869056 + AT_rich Low_complexity Low_complexity 1 29 0 2218 106 3 0 chr2 39818913 39819224 -210868630 + AluSx SINE Alu 1 312 0 1959 122 7 7 chr2 39819275 39819571 -210868283 + AluJo SINE Alu 1 296 -16 256 193 55 128 chr2 39819639 39819711 -210868143 + MIR SINE MIR 72 135 -127 1914 133 3 7 chr2 39819711 39820005 -210867849 + AluSx SINE Alu 1 293 -19 256 193 55 128 chr2 39820005 39820041 -210867813 + MIR SINE MIR 135 172 -90 360 0 0 0 chr2 39820065 39820105 -210867749 + (CA)n Simple_repeat Simple_repeat 2 41 0 2161 101 3 0 chr2 39820145 39820443 -210867411 - AluSp SINE Alu -14 299 1 1141 144 6 0 chr2 39820540 39820714 -210867140 - FAM SINE Alu 0 175 1 830 291 38 8 chr2 39821385 39821622 -210866232 + MIR SINE MIR 18 261 -1 261 270 27 115 chr2 39821624 39821679 -210866175 + MIR SINE MIR 1 59 -203 1933 142 17 0 chr2 39821679 39821981 -210865873 + AluJb SINE Alu 1 307 -5 261 270 27 115 chr2 39821981 39822073 -210865781 + MIR SINE MIR 59 135 -127 1782 209 26 28 chr2 39822077 39822546 -210865308 + L1 LINE L1 2173 2640 -3506 2129 103 7 0 chr2 39822899 39823191 -210864663 + AluSx SINE Alu 1 294 -18 267 171 26 92 chr2 39823219 39823295 -210864559 + MIR SINE MIR 184 254 -8 694 231 154 14 chr2 39823317 39823490 -210864364 - MIR SINE MIR 0 262 50 1828 157 3 7 chr2 39823490 39823789 -210864065 - AluJo SINE Alu -13 299 2 694 231 154 14 chr2 39823789 39823836 -210864018 - MIR SINE MIR -212 50 11 290 211 215 81 chr2 39825120 39825343 -210862511 + L3 LINE CR1 594 846 -731 501 287 8 0 chr2 39825392 39825521 -210862333 + MIR SINE MIR 84 213 -49 933 123 0 37 chr2 39825536 39825723 -210862131 + (ATGGTG)n Simple_repeat Simple_repeat 1 180 0 278 204 0 0 chr2 39825759 39825808 -210862046 - MIR SINE MIR -211 51 3 185 367 0 13 chr2 39825854 39825933 -210861921 + L3 LINE CR1 869 946 -631 2241 87 0 3 chr2 39825951 39826249 -210861605 + AluSx SINE Alu 1 297 -15 2277 99 0 0 chr2 39826363 39826666 -210861188 + AluSq SINE Alu 6 308 -5 878 135 0 0 chr2 39826707 39826833 -210861021 + FLAM_C SINE Alu 1 126 -17 286 345 192 0 chr2 39826837 39827014 -210860840 + L3 LINE CR1 1178 1388 -189 367 253 167 37 chr2 39827135 39827297 -210860557 + MER5A DNA MER1_type 7 189 0 2025 96 45 3 chr2 39828658 39828950 -210858904 - AluY SINE Alu -5 306 3 245 256 15 19 chr2 39828986 39829074 -210858780 + MER5A DNA MER1_type 33 126 -62 1453 144 44 72 chr2 39829078 39829260 -210858594 - AluJo SINE Alu 0 312 126 363 23 0 0 chr2 39829260 39829304 -210858550 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1853 125 4 0 chr2 39829314 39829586 -210858268 - AluSx SINE Alu -39 273 1 1453 144 44 72 chr2 39829586 39829712 -210858142 - AluJo SINE Alu -195 117 2 403 307 159 64 chr2 39829758 39830520 -210857334 + L2 LINE L2 1791 2624 -690 753 188 0 16 chr2 39830536 39830664 -210857190 - FLAM_A SINE Alu -7 126 1 1628 143 49 18 chr2 39830733 39831019 -210856835 - AluJo SINE Alu -17 295 1 1236 403 27 0 chr2 39831109 39831402 -210856452 + AluSg SINE Alu 1 301 -9 757 143 84 0 chr2 39831453 39831572 -210856282 - MER96 DNA MER1_type? -12 163 35 251 300 128 39 chr2 39831729 39831909 -210855945 + L2 LINE L2 3073 3268 -4 1331 186 23 30 chr2 39832550 39832851 -210855003 - AluJo SINE Alu -13 299 1 981 181 0 6 chr2 39832869 39833051 -210854803 + FRAM SINE Alu 1 175 -1 1814 149 3 13 chr2 39833169 39833508 -210854346 - AluSx SINE Alu 0 312 1 440 310 29 46 chr2 39833626 39833800 -210854054 - MIR3 SINE MIR -8 200 30 2346 87 6 0 chr2 39833833 39834144 -210853710 + AluSp SINE Alu 1 313 0 351 0 0 0 chr2 39834145 39834184 -210853670 + (TA)n Simple_repeat Simple_repeat 1 39 0 356 133 0 112 chr2 39834195 39834268 -210853586 - AluSg/x SINE Alu -114 188 132 271 86 0 35 chr2 39834288 39834346 -210853508 + (TA)n Simple_repeat Simple_repeat 1 56 0 37 23 0 0 chr2 39834868 39834912 -210852942 + AT_rich Low_complexity Low_complexity 1 44 0 192 271 17 0 chr2 39835091 39835150 -210852704 - L2 LINE L2 0 3313 3254 23 33 0 0 chr2 39835341 39835371 -210852483 + AT_rich Low_complexity Low_complexity 1 30 0 3487 166 22 17 chr2 39836207 39836986 -210850868 + L1M2 LINE L1 2536 3325 -3523 2003 129 7 3 chr2 39836986 39837281 -210850573 + AluSx SINE Alu 1 296 -16 3487 166 22 17 chr2 39837281 39837552 -210850302 + L1M2 LINE L1 3325 3593 -3255 640 176 23 8 chr2 39837571 39837702 -210850152 - FLAM_C SINE Alu 0 133 1 595 178 8 34 chr2 39837936 39838054 -210849800 - FRAM SINE Alu -61 115 1 267 153 17 0 chr2 39838054 39838113 -210849741 + MER39 LTR ERV1 609 668 -39 733 103 71 48 chr2 39838359 39838518 -210849336 + FLAM_C SINE Alu 1 133 0 1631 194 154 26 chr2 39838808 39839237 -210848617 + LTR2B LTR ERV1 7 490 0 1917 116 39 0 chr2 39839307 39839591 -210848263 + AluSc SINE Alu 2 296 -13 186 43 0 0 chr2 39839592 39839615 -210848239 + (T)n Simple_repeat Simple_repeat 1 23 0 1827 100 4 4 chr2 39839615 39839865 -210847989 - AluSx SINE Alu -62 250 1 293 272 96 52 chr2 39840170 39840306 -210847548 + MIR3 SINE MIR 24 165 -43 1547 122 146 36 chr2 39840982 39841318 -210846536 - THE1C LTR MaLR -2 373 1 1882 133 20 0 chr2 39841415 39841715 -210846139 + AluJb SINE Alu 5 310 -2 239 291 73 18 chr2 39841849 39841959 -210845895 + L2 LINE L2 3197 3312 -1 1143 213 30 0 chr2 39842255 39842460 -210845394 + MIR SINE MIR 20 234 -28 1785 104 4 12 chr2 39842460 39842719 -210845135 + AluSq SINE Alu 35 291 -22 1143 213 30 0 chr2 39842719 39842748 -210845106 + MIR SINE MIR 234 261 -1 324 230 59 82 chr2 39843245 39843274 -210844580 + L1MC4a LINE L1 5797 5825 -1983 2118 51 0 29 chr2 39843274 39843549 -210844305 + AluY SINE Alu 45 311 0 324 230 59 82 chr2 39843549 39843654 -210844200 + L1MC4a LINE L1 5825 5928 -1880 772 184 5 70 chr2 39843822 39843893 -210843961 + MER53 DNA DNA 2 76 -113 2288 75 7 0 chr2 39843893 39844187 -210843667 - AluSc SINE Alu -11 298 3 772 184 5 70 chr2 39844187 39844316 -210843538 + MER53 DNA DNA 76 189 0 594 239 0 0 chr2 39844484 39844593 -210843261 + MER44D DNA MER2_type 5 383 -226 1980 126 0 0 chr2 39844596 39844881 -210842973 + AluSx SINE Alu 3 287 -25 344 266 45 71 chr2 39844930 39845084 -210842770 + HAL1b LINE L1 1198 1347 -1 2380 56 7 3 chr2 39845220 39845245 -210842609 - AluY SINE Alu -5 306 283 414 0 0 0 chr2 39845245 39845291 -210842563 + (TG)n Simple_repeat Simple_repeat 1 46 0 2380 56 7 3 chr2 39845291 39845570 -210842284 - AluY SINE Alu -28 283 1 183 266 319 18 chr2 39846102 39846182 -210841672 - MIR SINE MIR -56 206 151 2173 113 0 0 chr2 39846182 39846493 -210841361 + AluSx SINE Alu 1 311 -1 183 266 319 18 chr2 39846493 39846525 -210841329 - MIR SINE MIR -111 151 60 2112 99 24 0 chr2 39847719 39848011 -210839843 - AluSp SINE Alu -14 299 1 215 179 0 167 chr2 39848628 39848684 -210839170 + MIR SINE MIR 35 76 -186 2175 115 0 0 chr2 39848684 39848988 -210838866 - AluSx SINE Alu -8 304 1 215 179 0 167 chr2 39848988 39849009 -210838845 + MIR SINE MIR 76 99 -163 240 230 230 22 chr2 39849094 39849158 -210838696 + MIR SINE MIR 92 141 -121 321 181 28 14 chr2 39849158 39849230 -210838624 + MER116 DNA Mariner 5 77 -3 240 230 230 22 chr2 39849230 39849300 -210838554 + MIR SINE MIR 141 254 -8 498 285 145 9 chr2 39849386 39849607 -210838247 + MIR SINE MIR 6 256 -6 1781 166 0 22 chr2 39849710 39850023 -210837831 - AluJb SINE Alu -6 306 1 270 272 218 27 chr2 39850071 39850218 -210837636 - MIR3 SINE MIR -1 207 33 1840 145 21 0 chr2 39850555 39850845 -210837009 + AluSx SINE Alu 1 296 -16 191 214 0 24 chr2 39851670 39851712 -210836142 + MIR SINE MIR 17 57 -151 295 310 97 71 chr2 39851964 39852316 -210835538 - L3 LINE CR1 -1102 475 115 2142 114 3 0 chr2 39852316 39852615 -210835239 + AluSq SINE Alu 1 300 -13 1233 144 16 98 chr2 39853056 39853274 -210834580 - MER46A DNA MER2_type -2495 236 40 2291 85 0 0 chr2 39853274 39853568 -210834286 - AluSq SINE Alu -19 294 1 1233 144 16 98 chr2 39853568 39853605 -210834249 - MER46A DNA MER2_type -2691 40 2 840 131 0 15 chr2 39854094 39854224 -210833630 + AluJo/FLAM SINE Alu 3 130 -172 1783 164 3 3 chr2 39854226 39854538 -210833316 + AluSx SINE Alu 1 312 0 1227 225 75 36 chr2 39854628 39854988 -210832866 - MLT1L LTR MaLR -144 471 98 2092 99 20 3 chr2 39855410 39855714 -210832140 - AluSx SINE Alu -3 309 1 2273 60 3 0 chr2 39855922 39856265 -210831589 - AluY SINE Alu 0 344 1 993 196 91 0 chr2 39856283 39856492 -210831362 + L1ME2 LINE L1 5703 5930 -234 2061 125 0 3 chr2 39857129 39857432 -210830422 + AluSx SINE Alu 1 302 -10 2206 112 0 0 chr2 39857631 39857927 -210829927 + AluSx SINE Alu 1 296 -16 2279 78 3 0 chr2 39857933 39858228 -210829626 + AluSp SINE Alu 3 298 -15 301 208 0 0 chr2 39858234 39858282 -210829572 - MER20 DNA MER1_type -170 49 2 265 257 110 59 chr2 39858482 39858513 -210829341 - MIR3 SINE MIR -27 181 153 2253 81 3 13 chr2 39858513 39858821 -210829033 - AluSp SINE Alu -8 305 1 265 257 110 59 chr2 39858821 39858925 -210828929 - MIR3 SINE MIR -55 153 39 1106 186 70 8 chr2 39859622 39859864 -210827990 + L1MD3 LINE L1 7739 7995 0 861 87 0 0 chr2 39859891 39860006 -210827848 + AluJb SINE Alu 1 115 -197 30 83 0 0 chr2 39860006 39860078 -210827776 + AT_rich Low_complexity Low_complexity 1 72 0 1560 167 29 14 chr2 39860158 39860434 -210827420 - AluJb SINE Alu -32 280 1 1754 139 7 20 chr2 39861098 39861392 -210826462 + AluJo SINE Alu 2 291 -21 21 0 0 0 chr2 39861426 39861447 -210826407 + AT_rich Low_complexity Low_complexity 1 21 0 888 130 0 0 chr2 39862115 39862246 -210825608 - FLAM_C SINE Alu -6 137 7 250 242 121 100 chr2 39862350 39862581 -210825273 - L2 LINE L2 -99 3173 2938 2136 131 0 0 chr2 39862902 39863214 -210824640 + AluSx SINE Alu 1 312 0 626 291 0 17 chr2 39863380 39863552 -210824302 - MIR SINE MIR -76 186 18 1566 172 28 7 chr2 39863607 39863897 -210823957 + AluJo SINE Alu 2 297 -15 198 240 0 0 chr2 39864194 39864244 -210823610 + GA-rich Low_complexity Low_complexity 4 53 0 2365 71 0 3 chr2 39864316 39864626 -210823228 + AluY SINE Alu 1 309 -2 843 152 7 0 chr2 39864842 39864980 -210822874 + AluJb SINE Alu 1 139 -173 239 0 0 31 chr2 39865000 39865032 -210822822 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2036 97 0 17 chr2 39865375 39865700 -210822154 - AluSx SINE Alu 0 320 1 2266 94 3 0 chr2 39865822 39866120 -210821734 - AluSq SINE Alu -14 299 1 996 175 16 5 chr2 39866124 39866313 -210821541 - AluJo SINE Alu -2 310 120 830 160 0 0 chr2 39866337 39866468 -210821386 - FLAM_C SINE Alu -7 136 6 2314 101 0 0 chr2 39866483 39866791 -210821063 - AluSx SINE Alu -4 308 1 1787 137 4 4 chr2 39867652 39867922 -210819932 - AluSx SINE Alu -19 293 24 890 124 0 16 chr2 39868482 39868611 -210819243 - FLAM_C SINE Alu -5 128 2 2199 98 0 0 chr2 39868628 39868915 -210818939 - AluSq SINE Alu -26 287 1 1061 85 55 0 chr2 39868964 39869128 -210818726 - L1MA5 LINE L1 -3 6297 6125 556 47 0 0 chr2 39869228 39869292 -210818562 + AluSq/x SINE Alu 62 125 -187 362 207 259 16 chr2 39869292 39869485 -210818369 + L2 LINE L2 1032 1271 -2043 440 307 48 7 chr2 39869946 39870092 -210817762 + MIR3 SINE MIR 41 193 -15 189 338 59 0 chr2 39870180 39870248 -210817606 - L2 LINE L2 -44 3228 3157 1931 166 43 98 chr2 39870276 39870595 -210817259 + MER65C LTR ERV1 1 336 -125 1815 150 3 10 chr2 39870595 39870908 -210816946 + AluJo SINE Alu 1 311 -1 1931 166 43 98 chr2 39870908 39871012 -210816842 + MER65C LTR ERV1 336 396 -65 2045 129 3 0 chr2 39871012 39871307 -210816547 - AluSx SINE Alu -16 296 1 1931 166 43 98 chr2 39871307 39871370 -210816484 + MER65C LTR ERV1 396 461 0 1627 173 0 4 chr2 39872342 39872619 -210815235 + AluJb SINE Alu 2 277 -35 213 39 0 0 chr2 39872628 39872654 -210815200 + (CA)n Simple_repeat Simple_repeat 2 27 0 433 156 0 0 chr2 39872669 39872733 -210815121 + FRAM/FAM SINE Alu 13 76 -100 1888 130 27 3 chr2 39872796 39873095 -210814759 - AluSx SINE Alu 0 312 7 2548 29 3 0 chr2 39873306 39873614 -210814240 - AluYa5 SINE Alu -2 309 1 1957 104 50 0 chr2 39873716 39873994 -210813860 + AluSq SINE Alu 1 292 -21 2083 112 0 0 chr2 39874038 39874324 -210813530 + AluSx SINE Alu 17 302 -10 2147 108 7 0 chr2 39874535 39874842 -210813012 + AluSg SINE Alu 1 309 -1 2193 99 3 0 chr2 39875200 39875493 -210812361 + AluSx SINE Alu 1 294 -18 1959 96 44 0 chr2 39875503 39875804 -210812050 + AluSx SINE Alu 1 313 0 752 203 0 0 chr2 39876110 39876243 -210811611 + MER2 DNA MER2_type 4 136 -209 1094 172 24 10 chr2 39876286 39876451 -210811403 - AluJb SINE Alu -20 292 122 186 71 0 0 chr2 39876451 39876479 -210811375 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1094 172 24 10 chr2 39876479 39876522 -210811332 - AluJb SINE Alu -190 122 81 214 311 16 0 chr2 39877289 39877350 -210810504 + L2 LINE L2 3206 3267 -5 2096 104 0 0 chr2 39877375 39877653 -210810201 - AluSg SINE Alu -32 278 1 2086 112 10 0 chr2 39877727 39878023 -210809831 + AluSq SINE Alu 1 299 -14 1864 140 0 10 chr2 39878028 39878335 -210809519 + AluSx SINE Alu 1 304 -8 1128 138 6 0 chr2 39878335 39878509 -210809345 + AluSg/x SINE Alu 134 308 -4 637 122 0 57 chr2 39879101 39879201 -210808653 - AluSg/x SINE Alu -7 302 209 1781 103 0 4 chr2 39879201 39879444 -210808410 - AluSq SINE Alu -71 242 1 637 122 0 57 chr2 39879444 39879466 -210808388 - AluSg/x SINE Alu -100 209 187 1810 151 10 3 chr2 39879725 39880024 -210807830 + AluJo SINE Alu 1 301 -11 2118 117 0 0 chr2 39880025 39880324 -210807530 + AluSx SINE Alu 1 299 -13 2146 84 40 0 chr2 39881203 39881500 -210806354 + AluSc SINE Alu 1 309 0 236 137 0 78 chr2 39881501 39881552 -210806302 - LTR9 LTR ERV1 -131 481 435 187 221 13 78 chr2 39882068 39882145 -210805709 - L2 LINE L2 -1 3271 3200 368 192 39 58 chr2 39882175 39882279 -210805575 - L1MC4a LINE L1 -467 7341 7240 2213 125 60 165 chr2 39882447 39882635 -210805219 + LTR42 LTR ERVL 1 207 -288 1844 91 0 60 chr2 39882635 39882920 -210804934 + AluSq SINE Alu 1 268 -45 437 87 29 0 chr2 39882924 39882993 -210804861 + Alu SINE Alu 239 309 0 2213 125 60 165 chr2 39882993 39883284 -210804570 + LTR42 LTR ERVL 210 495 0 1943 97 0 78 chr2 39883520 39883839 -210804015 + AluSx SINE Alu 1 294 -18 2093 97 7 0 chr2 39884067 39884355 -210803499 + AluSg1 SINE Alu 2 291 -18 321 185 15 0 chr2 39884374 39884439 -210803415 - Tigger8 DNA MER2_type -432 234 169 290 253 65 113 chr2 39884700 39884772 -210803082 + L1M4 LINE L1 25 99 -6443 684 187 0 43 chr2 39884772 39884911 -210802943 - FLAM_A SINE Alu 0 133 1 290 253 65 113 chr2 39884911 39885067 -210802787 + L1M4 LINE L1 99 242 -6300 317 331 88 6 chr2 39885316 39885476 -210802378 + L1M4 LINE L1 716 888 -5654 964 191 12 6 chr2 39885513 39885681 -210802173 + FAM SINE Alu 1 169 -6 1593 221 139 51 chr2 39885699 39885745 -210802109 + L1M4 LINE L1 1305 1346 -5479 1998 135 0 0 chr2 39885745 39886041 -210801813 + AluSx SINE Alu 1 296 -16 1593 221 139 51 chr2 39886041 39886101 -210801753 + L1M4 LINE L1 1346 1399 -5426 1650 126 30 15 chr2 39886101 39886372 -210801482 + AluSx SINE Alu 1 275 -37 204 67 0 0 chr2 39886376 39886406 -210801448 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1593 221 139 51 chr2 39886406 39887112 -210800742 + L1M4 LINE L1 1401 2324 -4501 2313 90 0 0 chr2 39887112 39887411 -210800443 + AluSc SINE Alu 1 299 -10 1593 221 139 51 chr2 39887411 39887567 -210800287 + L1M4 LINE L1 2324 2465 -4360 22 35 0 0 chr2 39887624 39887653 -210800201 + AT_rich Low_complexity Low_complexity 1 29 0 967 114 0 0 chr2 39887653 39887785 -210800069 + AluSq/x SINE Alu 1 132 -181 2197 97 7 0 chr2 39887787 39888086 -210799768 + AluSp SINE Alu 1 301 -12 305 265 163 96 chr2 39888338 39888388 -210799466 - MER5B DNA MER1_type 0 178 133 1482 157 60 8 chr2 39888388 39888656 -210799198 + AluJb SINE Alu 6 287 -25 305 265 163 96 chr2 39888656 39888771 -210799083 - MER5B DNA MER1_type -45 133 2 750 246 86 12 chr2 39889025 39889269 -210798585 - MER58B DNA MER1_type 0 341 80 1490 151 39 18 chr2 39889270 39889554 -210798300 + AluJo SINE Alu 1 290 -22 2068 94 11 0 chr2 39889562 39889849 -210798005 + AluSx SINE Alu 1 290 -22 411 272 201 6 chr2 39889850 39890019 -210797835 + L1MC/D LINE L1 5429 5630 -2178 954 110 19 26 chr2 39890119 39890274 -210797580 - AluSg/x SINE Alu -18 292 139 29 0 0 0 chr2 39890278 39890307 -210797547 + AT_rich Low_complexity Low_complexity 1 29 0 1853 120 7 17 chr2 39892457 39892757 -210795097 + AluSx SINE Alu 1 297 -15 306 258 0 0 chr2 39894169 39894231 -210793623 + FRAM/FAM SINE Alu 1 59 -107 1407 167 70 11 chr2 39895318 39895588 -210792266 + AluJb SINE Alu 6 291 -21 21 89 0 0 chr2 39897589 39897645 -210790209 + GC_rich Low_complexity Low_complexity 1 56 0 22 56 0 0 chr2 39897994 39898030 -210789824 + GC_rich Low_complexity Low_complexity 1 36 0 1792 160 14 3 chr2 39898530 39898817 -210789037 + AluSx SINE Alu 12 301 -11 410 189 15 152 chr2 39898911 39899043 -210788811 + MLT2B1 LTR ERVL 351 520 0 243 222 97 0 chr2 39899046 39899118 -210788736 - L1ME LINE L1 -250 5871 5793 344 314 146 58 chr2 39899214 39899287 -210788567 - L1ME LINE L1 -607 5514 5449 2406 83 3 0 chr2 39899287 39899577 -210788277 + AluY SINE Alu 1 291 -20 2077 134 10 0 chr2 39899587 39899885 -210787969 + AluSg SINE Alu 1 301 -9 344 314 146 58 chr2 39899885 39900026 -210787828 - L1ME LINE L1 -680 5441 5269 1109 136 0 7 chr2 39900171 39900326 -210787528 - AluSx SINE Alu -15 297 144 548 103 0 0 chr2 39900338 39900416 -210787438 - AluSx SINE Alu -233 79 2 932 162 7 13 chr2 39900484 39900638 -210787216 - AluJb SINE Alu -78 234 82 55 45 0 0 chr2 39900872 39900938 -210786916 + GC_rich Low_complexity Low_complexity 1 66 0 2293 86 3 3 chr2 39902880 39903171 -210784683 + AluSx SINE Alu 1 291 -21 2311 76 4 0 chr2 39903264 39903541 -210784313 + AluSp SINE Alu 1 278 -35 2345 74 9 40 chr2 39903543 39903866 -210783988 + AluSq SINE Alu 1 313 0 682 156 0 8 chr2 39904004 39904126 -210783728 + FLAM_C SINE Alu 12 132 -11 22 0 0 0 chr2 39904639 39904661 -210783193 + AT_rich Low_complexity Low_complexity 1 22 0 2059 136 23 3 chr2 39905035 39905337 -210782517 - AluSx SINE Alu -4 308 1 11341 31 11 85 chr2 39905349 39906840 -210781014 - SVA Other Other -1 1385 5 195 42 0 0 chr2 39906840 39906864 -210780990 + (GGGAGA)n Simple_repeat Simple_repeat 2 25 0 698 162 8 0 chr2 39907293 39907410 -210780444 + FLAM_C SINE Alu 1 118 -15 22 0 0 0 chr2 39907410 39907432 -210780422 + AT_rich Low_complexity Low_complexity 1 22 0 2278 88 3 3 chr2 39907432 39907752 -210780102 - AluSp SINE Alu 0 320 1 598 194 31 16 chr2 39907808 39907937 -210779917 + FLAM_C SINE Alu 3 133 -10 930 186 75 91 chr2 39908016 39908323 -210779531 - AluJo SINE Alu 0 302 1 2101 101 51 3 chr2 39908330 39908626 -210779228 - AluSg SINE Alu 0 310 1 6249 140 36 35 chr2 40008700 40009457 -210678397 - Tigger2 DNA MER2_type -1608 1110 350 2471 86 0 3 chr2 40009457 40009761 -210678093 - AluSp SINE Alu -10 303 1 6249 140 36 35 chr2 40009761 40010112 -210677742 - Tigger2 DNA MER2_type -2368 350 1 1843 146 18 7 chr2 40010402 40010682 -210677172 - AluSx SINE Alu -29 283 1 225 232 89 0 chr2 40010724 40010780 -210677074 - L1ME LINE L1 -377 5789 5729 1556 113 113 31 chr2 40010937 40011194 -210676660 + AluJo SINE Alu 25 302 -10 1163 266 125 51 chr2 40011363 40011912 -210675942 - L2 LINE L2 0 3313 2713 844 155 0 0 chr2 40011912 40012041 -210675813 - FLAM_C SINE Alu 0 133 5 1163 266 125 51 chr2 40012041 40012135 -210675719 - L2 LINE L2 -600 2713 2627 500 246 30 51 chr2 40012155 40012391 -210675463 - L1MC4a LINE L1 -1907 5901 5671 1242 61 0 0 chr2 40012600 40012747 -210675107 + AluSg/x SINE Alu 156 302 -10 198 0 0 0 chr2 40012747 40012769 -210675085 + (TA)n Simple_repeat Simple_repeat 2 23 0 198 0 0 0 chr2 40012769 40012791 -210675063 + (T)n Simple_repeat Simple_repeat 1 22 0 787 277 115 64 chr2 40013205 40013718 -210674136 + HAL1 LINE L1 145 683 -1824 666 63 11 32 chr2 40013825 40013920 -210673934 - L1PA14 LINE L1 -203 5958 5866 2054 130 27 43 chr2 40013921 40014106 -210673748 - L1MB1 LINE L1 -43 6125 5947 2210 99 33 3 chr2 40014106 40014408 -210673446 - AluSq SINE Alu -2 311 1 2054 130 27 43 chr2 40014408 40014592 -210673262 - L1MB1 LINE L1 -221 5947 5762 401 96 0 0 chr2 40014603 40014655 -210673199 + L1M3 LINE L1 5611 5662 -506 897 95 95 15 chr2 40014655 40014792 -210673062 + AluSg SINE Alu 1 148 -162 551 176 0 0 chr2 40014792 40014883 -210672971 - L1MB1 LINE L1 -420 5748 5658 475 84 0 36 chr2 40014883 40014966 -210672888 - Alu SINE Alu 0 312 233 1003 214 93 43 chr2 40015156 40015436 -210672418 - AluJo SINE Alu -8 294 1 1964 137 10 13 chr2 40015996 40016309 -210671545 + AluJb SINE Alu 1 312 0 349 150 0 0 chr2 40016579 40016639 -210671215 - MER21A LTR ERV1 -355 576 517 1432 176 26 4 chr2 40016641 40016913 -210670941 + AluSx SINE Alu 1 278 -34 1324 183 11 18 chr2 40017017 40017301 -210670553 - L1MB1 LINE L1 -821 5325 5044 * 1934 169 0 27 chr2 40017298 40017670 -210670184 + L1M4 LINE L1 3761 4122 -2024 297 194 28 0 chr2 40017674 40017746 -210670108 + L1M4 LINE L1 5173 5246 -900 2516 138 30 8 chr2 40017747 40018144 -210669710 - MER73 LTR ERVL 0 644 239 957 181 25 48 chr2 40018161 40018251 -210669603 + L1M4 LINE L1 5232 5323 -851 2297 91 0 3 chr2 40018251 40018548 -210669306 + AluSx SINE Alu 1 296 -16 957 181 25 48 chr2 40018548 40018709 -210669145 + L1M4 LINE L1 5323 5476 -698 1686 67 62 0 chr2 40018718 40018943 -210668911 - L1PA10 LINE L1 -11 6157 5919 423 289 33 0 chr2 40019050 40019171 -210668683 + L2 LINE L2 2192 2316 -998 292 180 0 16 chr2 40019177 40019238 -210668616 + L2 LINE L2 2625 2684 -630 616 249 6 65 chr2 40019258 40019427 -210668427 + MER91A DNA MER1_type 13 171 -25 830 301 102 10 chr2 40019463 40020008 -210667846 + L2 LINE L2 2715 3312 -1 825 111 0 0 chr2 40020088 40020196 -210667658 + FLAM_C SINE Alu 1 108 -35 1997 108 7 3 chr2 40020208 40020494 -210667360 + Tigger3(Golem) DNA MER2_type 2605 2891 -138 414 268 39 62 chr2 40020629 40020808 -210667046 + MIR SINE MIR 82 256 -6 1145 189 31 4 chr2 40022823 40023082 -210664772 - AluSq SINE Alu -8 305 40 333 246 59 34 chr2 40023948 40024066 -210663788 - MIR SINE MIR -60 148 28 995 142 261 43 chr2 40024416 40024669 -210663185 + AluJb SINE Alu 1 308 -4 1487 142 87 36 chr2 40025138 40025413 -210662441 + AluJb SINE Alu 1 289 -23 1728 167 18 4 chr2 40025818 40026094 -210661760 + AluJb SINE Alu 20 299 -13 8806 114 50 26 chr2 40026102 40026142 -210661712 - Tigger2 DNA MER2_type -151 2567 2529 2174 131 0 6 chr2 40026142 40026454 -210661400 - AluSx SINE Alu 0 312 3 8806 114 50 26 chr2 40026454 40027818 -210660036 - Tigger2 DNA MER2_type -189 2529 1129 1087 104 0 0 chr2 40027931 40028075 -210659779 + AluSg/x SINE Alu 154 297 -15 1720 111 43 8 chr2 40028861 40029114 -210658740 + AluSg SINE Alu 34 295 -15 2132 133 7 0 chr2 40029143 40029444 -210658410 - AluSq SINE Alu -10 303 1 1905 135 4 0 chr2 40029829 40030110 -210657744 - AluSp SINE Alu -11 302 21 2166 105 0 16 chr2 40030641 40030946 -210656908 - AluSc SINE Alu -9 300 1 1499 176 12 46 chr2 40031088 40031271 -210656583 - AluJo SINE Alu 0 312 143 207 69 0 0 chr2 40031271 40031300 -210656554 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1499 176 12 46 chr2 40031300 40031439 -210656415 - AluJo SINE Alu -169 143 1 1477 201 44 0 chr2 40031826 40032124 -210655730 - AluJb SINE Alu -1 311 1 198 182 23 0 chr2 40032156 40032200 -210655654 - MIR SINE MIR -32 230 186 269 320 12 35 chr2 40032592 40032764 -210655090 + GA-rich Low_complexity Low_complexity 4 171 0 228 139 0 0 chr2 40032779 40032822 -210655032 - Alu SINE Alu -259 43 1 1557 91 5 5 chr2 40032992 40033201 -210654653 + AluSc SINE Alu 99 307 -2 204 40 0 0 chr2 40033335 40033360 -210654494 + (CA)n Simple_repeat Simple_repeat 2 26 0 2148 101 27 7 chr2 40034067 40034363 -210653491 + AluSg1 SINE Alu 1 302 -7 2303 106 0 0 chr2 40034406 40034698 -210653156 + AluSx SINE Alu 1 292 -20 989 133 170 0 chr2 40034698 40034863 -210652991 + AluY SINE Alu 1 193 -118 339 49 0 0 chr2 40034963 40035004 -210652850 - AluY SINE Alu -261 41 1 232 160 20 0 chr2 40035008 40035058 -210652796 + L1MC5 LINE L1 7701 7751 -210 2066 120 6 35 chr2 40035058 40035375 -210652479 + AluSx SINE Alu 1 308 -4 261 0 0 0 chr2 40035375 40035404 -210652450 + (TA)n Simple_repeat Simple_repeat 2 30 0 1809 164 14 0 chr2 40035511 40035804 -210652050 + AluSq SINE Alu 1 297 -16 2460 56 0 34 chr2 40037069 40037389 -210650465 + AluSq SINE Alu 1 309 -4 1055 179 26 0 chr2 40037534 40037729 -210650125 - MER41C LTR ERV1 0 554 355 1383 126 0 0 chr2 40037858 40038048 -210649806 + AluSg/x SINE Alu 108 297 -13 297 191 45 0 chr2 40038226 40038315 -210649539 - L1ME4a LINE L1 -12 6109 6017 2214 108 3 19 chr2 40038442 40038757 -210649097 + AluSq SINE Alu 3 312 -1 1209 87 7 0 chr2 40038758 40038939 -210648915 + AluSg/x SINE Alu 130 311 0 891 171 33 0 chr2 40038945 40039097 -210648757 + FRAM SINE Alu 10 166 -10 1667 149 25 16 chr2 40039206 40039527 -210648327 - MER33 DNA MER1_type 0 324 1 899 112 0 0 chr2 40040014 40040139 -210647715 + FRAM SINE Alu 41 165 -11 274 253 11 53 chr2 40040139 40040234 -210647620 - L1ME2 LINE L1 -140 6024 5934 1139 259 98 51 chr2 40040296 40040828 -210647026 - LTR67 LTR ERVL 0 557 1 1737 181 3 16 chr2 40041051 40041360 -210646494 + AluJo SINE Alu 1 305 -7 306 219 32 89 chr2 40042084 40042207 -210645647 - MIR SINE MIR -70 192 77 1087 68 0 0 chr2 40042690 40042822 -210645032 - AluSp/q SINE Alu -4 309 178 459 146 135 0 chr2 40042935 40043024 -210644830 + MER3 DNA MER1_type 109 209 0 231 232 71 0 chr2 40043373 40043429 -210644425 - L3 LINE CR1 -3 1574 1515 248 225 4 0 chr2 40043552 40043608 -210644246 + MIR SINE MIR 63 121 -87 657 183 75 0 chr2 40043685 40043805 -210644049 - FLAM_A SINE Alu -2 131 3 2089 127 0 0 chr2 40043830 40044137 -210643717 - AluSx SINE Alu 0 307 1 2540 169 4 15 chr2 40044881 40045348 -210642506 + L1MB7 LINE L1 5723 6184 0 1205 199 40 43 chr2 40045592 40045869 -210641985 - AluJo SINE Alu -12 300 25 300 314 118 44 chr2 40046018 40046314 -210641540 + L2 LINE L2 2587 2904 -410 2144 123 3 10 chr2 40046323 40046631 -210641223 - AluSx SINE Alu -6 306 1 1002 161 51 46 chr2 40046751 40046968 -210640886 - MER20 DNA MER1_type 0 219 2 1579 155 61 37 chr2 40046995 40047292 -210640562 + AluJb SINE Alu 1 304 -8 1397 138 14 9 chr2 40047440 40047658 -210640196 + AluJb SINE Alu 83 301 -11 29 0 0 0 chr2 40047995 40048024 -210639830 + AT_rich Low_complexity Low_complexity 1 29 0 1935 127 7 14 chr2 40048038 40048322 -210639532 - AluSg SINE Alu -27 283 2 1918 149 0 16 chr2 40048719 40049028 -210638826 - AluJo SINE Alu -8 304 1 1547 101 5 0 chr2 40049055 40049254 -210638600 + AluSg/x SINE Alu 91 290 -22 1822 161 10 33 chr2 40049941 40050246 -210637608 - AluJb SINE Alu -14 298 1 204 354 92 15 chr2 40051070 40051200 -210636654 - L2 LINE L2 0 3272 3133 27 45 0 45 chr2 40051376 40051411 -210636443 + AT_rich Low_complexity Low_complexity 1 33 -31 1668 166 0 55 chr2 40051411 40051719 -210636135 - AluJo SINE Alu -21 291 1 27 45 0 45 chr2 40051719 40051750 -210636104 + AT_rich Low_complexity Low_complexity 33 64 0 21 82 0 0 chr2 40051952 40052001 -210635853 + AT_rich Low_complexity Low_complexity 1 49 0 2050 129 13 10 chr2 40052369 40052679 -210635175 + AluSx SINE Alu 1 311 -1 1948 123 0 14 chr2 40053125 40053449 -210634405 - AluSg SINE Alu 0 310 1 268 211 0 18 chr2 40053522 40053579 -210634275 + Charlie4 DNA MER1_type 1883 1938 -23 1642 170 24 20 chr2 40053703 40053997 -210633857 + AluJb SINE Alu 1 295 -17 2028 140 0 3 chr2 40054077 40054387 -210633467 + AluSx SINE Alu 1 309 0 1295 122 0 6 chr2 40054467 40054648 -210633206 + AluJb SINE Alu 7 186 -126 2316 98 0 3 chr2 40055177 40055474 -210632380 + AluSx SINE Alu 1 296 -16 213 323 53 45 chr2 40056073 40056206 -210631648 + MIR SINE MIR 83 216 -46 21 0 0 0 chr2 40056703 40056724 -210631130 + AT_rich Low_complexity Low_complexity 1 21 0 1030 170 18 0 chr2 40056853 40057018 -210630836 + AluJb SINE Alu 137 304 -8 484 297 61 65 chr2 40057856 40058102 -210629752 + MIR SINE MIR 12 256 -6 1038 133 0 0 chr2 40058162 40058305 -210629549 - FRAM SINE Alu -14 162 20 302 299 146 47 chr2 40058307 40058608 -210629246 + L1MC4a LINE L1 3366 3696 -2450 1967 144 23 3 chr2 40058616 40058915 -210628939 + AluSx SINE Alu 1 305 -7 429 319 115 48 chr2 40059037 40059509 -210628345 + L1MC4a LINE L1 5296 5504 -855 2193 114 10 0 chr2 40059509 40059808 -210628046 + AluSx SINE Alu 1 302 -10 429 319 115 48 chr2 40059808 40059895 -210627959 + L1MC4a LINE L1 5504 5584 -775 23 0 0 0 chr2 40060067 40060090 -210627764 + AT_rich Low_complexity Low_complexity 1 23 0 824 187 0 7 chr2 40060135 40060274 -210627580 - FLAM_C SINE Alu -4 139 2 1867 107 0 50 chr2 40060756 40061036 -210626818 - AluSx SINE Alu -46 266 1 23 54 0 0 chr2 40061935 40061972 -210625882 + AT_rich Low_complexity Low_complexity 1 37 0 2492 76 3 0 chr2 40061989 40062293 -210625561 + AluSp SINE Alu 1 305 -8 484 271 96 21 chr2 40063154 40063342 -210624512 - L2 LINE L2 -3 3310 3109 825 175 0 0 chr2 40063427 40063570 -210624284 + FLAM_C SINE Alu 1 143 0 993 158 0 12 chr2 40063611 40063805 -210624049 + AluJb SINE Alu 120 311 0 329 337 83 24 chr2 40063844 40064049 -210623805 - L2 LINE L2 -359 2955 2739 1053 194 29 0 chr2 40064071 40064241 -210623613 + FAM SINE Alu 1 175 0 21 0 0 0 chr2 40064492 40064513 -210623341 + AT_rich Low_complexity Low_complexity 1 21 0 1059 64 64 0 chr2 40064517 40064657 -210623197 + AluSg/x SINE Alu 145 293 -19 2420 65 0 7 chr2 40066315 40066609 -210621245 - AluY SINE Alu -19 292 1 2498 222 37 36 chr2 40066612 40068004 -210619850 - L1M4c LINE L1 -4782 2177 673 266 312 44 21 chr2 40068077 40068105 -210619749 + MER5A DNA MER1_type 33 59 -130 1985 111 41 0 chr2 40068105 40068404 -210619450 + AluSx SINE Alu 1 310 0 266 312 44 21 chr2 40068404 40068510 -210619344 + MER5A DNA MER1_type 59 185 -4 874 20 0 0 chr2 40068846 40068946 -210618908 - AluY SINE Alu -210 100 1 278 338 81 0 chr2 40069022 40069158 -210618696 + L2 LINE L2 3166 3312 -1 250 289 29 77 chr2 40069477 40069581 -210618273 - MIR3 SINE MIR -100 108 10 1923 199 50 24 chr2 40070576 40071039 -210616815 - L1MC4 LINE L1 0 8042 7568 1040 58 0 0 chr2 40071139 40071286 -210616568 + AluSg/x SINE Alu 162 308 0 1872 152 24 7 chr2 40071814 40072111 -210615743 + AluJo SINE Alu 1 302 -10 525 321 96 23 chr2 40072500 40072578 -210615276 + MIR SINE MIR 16 87 -175 2289 89 3 3 chr2 40072578 40072880 -210614974 - AluSq SINE Alu -11 302 1 525 321 96 23 chr2 40072880 40073019 -210614835 + MIR SINE MIR 87 249 -13 238 220 0 51 chr2 40073061 40073120 -210614734 + AluS SINE Alu 2 57 -243 1751 128 24 14 chr2 40073366 40073656 -210614198 - AluSx SINE Alu -19 293 1 1031 137 0 20 chr2 40073800 40073953 -210613901 - AluSg/x SINE Alu -37 275 126 2258 76 42 7 chr2 40073954 40074242 -210613612 - AluSx SINE Alu -14 298 1 1008 93 0 56 chr2 40074343 40074504 -210613350 + AluSg/x SINE Alu 157 308 -2 1270 185 112 25 chr2 40074727 40075003 -210612851 - AluJo SINE Alu -12 300 1 354 254 172 65 chr2 40075054 40075166 -210612688 + MIR SINE MIR 20 157 -105 2283 112 0 3 chr2 40075166 40075469 -210612385 - AluSx SINE Alu -10 302 1 354 254 172 65 chr2 40075469 40075525 -210612329 + MIR SINE MIR 157 206 -56 182 274 97 16 chr2 40075689 40075751 -210612103 + L2 LINE L2 3242 3308 -5 21 0 0 0 chr2 40076018 40076039 -210611815 + AT_rich Low_complexity Low_complexity 1 21 0 873 199 0 0 chr2 40076097 40076228 -210611626 + FLAM_A SINE Alu 1 131 -2 2110 105 35 0 chr2 40076245 40076531 -210611323 + AluSg SINE Alu 1 296 -14 2168 123 0 13 chr2 40076572 40076882 -210610972 + AluJb SINE Alu 1 306 -6 968 154 0 0 chr2 40077071 40077220 -210610634 - AluJb SINE Alu -9 303 155 2178 104 3 0 chr2 40077659 40077948 -210609906 + AluSp SINE Alu 1 290 -23 270 81 0 0 chr2 40078226 40078263 -210609591 + (TG)n Simple_repeat Simple_repeat 2 38 0 268 109 0 0 chr2 40078265 40078311 -210609543 - LTR66 LTR ERVL -171 439 394 250 111 0 0 chr2 40078274 40078319 -210609535 + LTR66 LTR ERVL 395 439 -171 * 312 27 0 0 chr2 40078321 40078358 -210609496 + (CA)n Simple_repeat Simple_repeat 2 38 0 1242 56 0 0 chr2 40078932 40079074 -210608780 - AluSq/x SINE Alu -171 142 1 195 100 0 0 chr2 40079192 40079222 -210608632 + (CA)n Simple_repeat Simple_repeat 2 31 0 2296 80 0 10 chr2 40079276 40079577 -210608277 - AluY SINE Alu -13 298 1 2387 105 0 0 chr2 40079579 40079892 -210607962 - AluSq SINE Alu 0 313 1 652 170 107 0 chr2 40080797 40080909 -210606945 - FLAM_A SINE Alu -9 124 1 209 345 130 17 chr2 40081456 40081633 -210606221 - L2 LINE L2 -822 2492 2296 322 337 110 57 chr2 40081768 40082103 -210605751 - L2 LINE L2 -2 3270 2918 201 241 0 0 chr2 40082491 40082545 -210605309 + GA-rich Low_complexity Low_complexity 2 55 0 791 218 19 32 chr2 40082630 40082846 -210605008 + L2 LINE L2 3101 3313 0 309 298 124 54 chr2 40082952 40083378 -210604476 + L1 LINE L1 4943 5398 -748 22 0 0 0 chr2 40083424 40083446 -210604408 + AT_rich Low_complexity Low_complexity 1 22 0 2473 58 7 7 chr2 40085344 40085654 -210602200 + AluY SINE Alu 2 311 0 683 216 111 28 chr2 40085869 40086050 -210601804 + MIR SINE MIR 3 198 -64 246 128 0 0 chr2 40086056 40086095 -210601759 + (CTA)n Simple_repeat Simple_repeat 3 41 0 242 254 45 0 chr2 40086297 40086364 -210601490 - L2 LINE L2 0 3313 3244 2226 117 0 0 chr2 40086426 40086726 -210601128 + AluSx SINE Alu 1 300 -12 301 254 113 132 chr2 40086793 40087104 -210600750 - MLT1L LTR MaLR -92 452 115 2089 121 7 3 chr2 40087248 40087553 -210600301 + AluSq SINE Alu 1 306 -7 482 230 0 0 chr2 40087571 40087658 -210600196 + MER21B LTR ERV1 329 415 -448 627 188 9 9 chr2 40087666 40087778 -210600076 - AluSp/q SINE Alu -13 300 189 1696 109 0 4 chr2 40087913 40088142 -210599712 - AluSp SINE Alu -85 228 1 2130 124 0 10 chr2 40088154 40088461 -210599393 - AluSg SINE Alu -6 304 1 858 168 8 0 chr2 40088467 40088598 -210599256 - FLAM_C SINE Alu 0 133 2 194 200 0 0 chr2 40088703 40088738 -210599116 - MER5A DNA MER1_type 0 189 155 755 239 39 6 chr2 40088827 40089007 -210598847 - MER5A DNA MER1_type 0 189 4 2003 115 35 0 chr2 40089231 40089518 -210598336 + AluSx SINE Alu 1 297 -15 1013 142 7 13 chr2 40090185 40090340 -210597514 - FRAM SINE Alu -13 163 10 1931 127 28 3 chr2 40090351 40090635 -210597219 - AluSg SINE Alu -19 291 1 2325 93 0 7 chr2 40090774 40091076 -210596778 - AluSp SINE Alu -13 300 1 791 269 108 29 chr2 40091119 40091398 -210596456 - AluSx SINE Alu -1 301 1 819 200 30 32 chr2 40091398 40091627 -210596227 - L1M4 LINE L1 -694 5484 5252 1892 95 0 4 chr2 40091627 40091868 -210595986 + AluSc SINE Alu 1 240 -69 819 200 30 32 chr2 40091868 40091938 -210595916 - L1M4 LINE L1 -926 5252 5183 263 28 28 0 chr2 40091938 40091974 -210595880 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1206 190 60 19 chr2 40091977 40092246 -210595608 - AluJo SINE Alu -30 282 3 676 128 154 17 chr2 40092259 40092376 -210595478 - FLAM_C SINE Alu 0 133 1 775 135 0 0 chr2 40092504 40092608 -210595246 + AluSg/x SINE Alu 194 297 -15 213 298 53 0 chr2 40092640 40092697 -210595157 + L2 LINE L2 3180 3239 -33 1784 135 36 4 chr2 40092729 40093010 -210594844 + AluSx SINE Alu 1 290 -22 23 33 0 0 chr2 40093989 40094019 -210593835 + AT_rich Low_complexity Low_complexity 1 30 0 2289 162 26 26 chr2 40094143 40094569 -210593285 + L1MA7 LINE L1 5861 6286 -5 1608 177 0 23 chr2 40094629 40094928 -210592926 + AluJo SINE Alu 1 292 -20 265 371 59 18 chr2 40095003 40095173 -210592681 - L2 LINE L2 -188 3084 2908 204 40 0 0 chr2 40095861 40095886 -210591968 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 296 285 53 18 chr2 40096419 40096532 -210591322 - MIR SINE MIR -87 121 15 2560 46 0 52 chr2 40096552 40096877 -210590977 + AluY SINE Alu 1 308 -3 381 212 24 0 chr2 40097176 40097261 -210590593 + MIR3 SINE MIR 81 167 -41 771 291 62 14 chr2 40097383 40097672 -210590182 - L2 LINE L2 0 3313 3011 210 365 47 28 chr2 40098662 40098769 -210589085 - L2 LINE L2 -10 3262 3154 1369 122 0 0 chr2 40099142 40099331 -210588523 + AluSq SINE Alu 1 189 -124 859 153 31 6 chr2 40099433 40099596 -210588258 + L1PA13 LINE L1 5992 6158 -5 192 111 0 0 chr2 40100248 40100284 -210587570 + (A)n Simple_repeat Simple_repeat 1 36 0 181 321 0 0 chr2 40100420 40100476 -210587378 - L2 LINE L2 -1 3312 3257 2006 131 0 0 chr2 40100554 40100860 -210586994 + AluSx SINE Alu 1 306 0 552 262 120 6 chr2 40101384 40101567 -210586287 + MIR SINE MIR 2 205 -57 839 163 0 23 chr2 40102364 40102493 -210585361 - FLAM_C SINE Alu -7 126 1 2694 144 23 56 chr2 40102672 40103186 -210584668 - L1MB7 LINE L1 -8 6176 5680 260 118 39 0 chr2 40103216 40103267 -210584587 - L1MB7 LINE L1 -479 5699 5647 221 200 147 13 chr2 40103552 40103627 -210584227 + MER5A DNA MER1_type 38 122 -67 485 244 107 124 chr2 40103726 40104378 -210583476 + HAL1 LINE L1 972 1612 -895 1779 155 10 0 chr2 40104421 40104712 -210583142 + AluJb SINE Alu 13 306 -6 823 115 0 58 chr2 40104734 40104873 -210582981 + FLAM_C SINE Alu 11 141 -2 261 0 0 0 chr2 40105189 40105218 -210582636 + (TTTAA)n Simple_repeat Simple_repeat 2 30 0 1201 68 0 6 chr2 40105218 40105369 -210582485 - AluYa5 SINE Alu -8 303 152 210 264 97 0 chr2 40105441 40105513 -210582341 + L2 LINE L2 2937 3015 -257 282 344 92 0 chr2 40105518 40105649 -210582205 + MIR SINE MIR 3 145 -117 1977 140 7 0 chr2 40106092 40106377 -210581477 - AluSq SINE Alu -26 287 1 2223 122 0 0 chr2 40107623 40107917 -210579937 + AluSx SINE Alu 1 294 -18 2088 130 0 20 chr2 40108277 40108578 -210579276 + AluSq SINE Alu 1 295 -18 4546 117 13 30 chr2 40108696 40109195 -210578659 - L1MB1 LINE L1 0 6168 5683 2274 111 3 0 chr2 40109195 40109493 -210578361 - AluSx SINE Alu -13 299 1 4546 117 13 30 chr2 40109493 40109692 -210578162 - L1MB1 LINE L1 -485 5683 5482 23 54 0 0 chr2 40109837 40109874 -210577980 + AT_rich Low_complexity Low_complexity 1 37 0 2149 103 10 3 chr2 40110528 40110818 -210577036 + AluSx SINE Alu 1 292 -20 3020 217 41 35 chr2 40110819 40110842 -210577012 - L1M4 LINE L1 -2564 3582 3561 2325 72 14 0 chr2 40110842 40111132 -210576722 + AluSp SINE Alu 1 294 -19 3020 217 41 35 chr2 40111132 40111513 -210576341 - L1M4 LINE L1 -2585 3561 3184 2257 105 3 0 chr2 40111513 40111808 -210576046 - AluSg SINE Alu -13 297 2 3020 217 41 35 chr2 40111808 40112323 -210575531 - L1M4 LINE L1 -2962 3184 2656 280 79 0 0 chr2 40112556 40112594 -210575260 + HY1 scRNA scRNA 2 39 -73 190 241 19 19 chr2 40112628 40112682 -210575172 - MIR SINE MIR -73 135 82 354 47 0 0 chr2 40112805 40112848 -210575006 + tRNA-Gln-CAG tRNA tRNA 1 43 -32 1789 169 3 7 chr2 40113746 40114042 -210573812 + AluJo SINE Alu 1 295 -17 1604 184 17 10 chr2 40114957 40115256 -210572598 + AluSx SINE Alu 6 306 -6 2337 89 3 0 chr2 40115295 40115588 -210572266 + AluSp SINE Alu 1 294 -19 2234 123 0 0 chr2 40116079 40116379 -210571475 + AluSx SINE Alu 1 300 -12 235 122 24 0 chr2 40116647 40116688 -210571166 + Alu SINE Alu 3 44 -258 937 136 0 8 chr2 40116828 40116960 -210570894 + FLAM_C SINE Alu 1 131 -2 22 0 0 0 chr2 40118665 40118687 -210569167 + AT_rich Low_complexity Low_complexity 1 22 0 2269 106 0 3 chr2 40118693 40118995 -210568859 + AluSx SINE Alu 1 301 -11 254 241 154 56 chr2 40118999 40119125 -210568729 + L1ME4a LINE L1 5292 5439 -2369 2349 99 0 10 chr2 40119125 40119437 -210568417 + AluSg SINE Alu 1 309 -1 254 241 154 56 chr2 40119437 40119472 -210568382 + L1ME4a LINE L1 5439 5469 -2339 1517 174 56 31 chr2 40119475 40119763 -210568091 + AluJb SINE Alu 1 295 -17 947 219 0 12 chr2 40119793 40119962 -210567892 + FAM SINE Alu 1 167 -8 802 185 0 15 chr2 40119965 40120100 -210567754 + AluJo SINE Alu 2 134 -178 634 277 61 17 chr2 40120171 40120484 -210567370 + L1ME4a LINE L1 5513 5897 -224 2486 91 0 0 chr2 40120635 40120942 -210566912 + AluSc SINE Alu 1 307 -2 2122 107 7 0 chr2 40120942 40121231 -210566623 + AluSp SINE Alu 1 291 -22 2320 79 0 0 chr2 40121231 40121521 -210566333 + AluY SINE Alu 1 290 -21 2156 122 3 0 chr2 40121536 40121840 -210566014 + AluSx SINE Alu 3 307 -5 707 346 139 26 chr2 40122681 40123485 -210564369 + L2 LINE L2 1844 2738 -576 1174 268 87 37 chr2 40123801 40124372 -210563482 - L2 LINE L2 -1 3312 2704 2111 140 3 0 chr2 40124372 40124680 -210563174 - AluSx SINE Alu -3 309 1 1174 268 87 37 chr2 40124680 40124822 -210563032 - L2 LINE L2 -609 2704 2571 1907 119 0 0 chr2 40124827 40125088 -210562766 + AluSx SINE Alu 21 281 -31 183 42 0 0 chr2 40125091 40125115 -210562739 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1782 212 3 0 chr2 40125115 40125431 -210562423 + MLT1A1 LTR MaLR 49 365 0 1600 135 101 38 chr2 40125434 40125577 -210562277 + L1MB7 LINE L1 5713 5846 -320 1625 166 63 0 chr2 40125577 40125861 -210561993 + AluJb SINE Alu 1 302 -10 1600 135 101 38 chr2 40125861 40126122 -210561732 + L1MB7 LINE L1 5846 6158 -8 21 0 0 0 chr2 40126597 40126618 -210561236 + AT_rich Low_complexity Low_complexity 1 21 0 234 91 0 0 chr2 40128132 40128165 -210559689 + (T)n Simple_repeat Simple_repeat 1 33 0 1462 147 0 5 chr2 40128186 40128397 -210559457 - AluJo SINE Alu -102 210 1 255 170 0 0 chr2 40128518 40128565 -210559289 + CT-rich Low_complexity Low_complexity 3 49 0 1454 92 5 10 chr2 40130153 40130215 -210557639 - AluSg SINE Alu -116 194 133 2410 67 10 0 chr2 40130215 40130515 -210557339 - AluSp SINE Alu -10 303 1 1454 92 5 10 chr2 40130515 40130647 -210557207 - AluSg SINE Alu -177 133 1 2471 73 7 0 chr2 40130650 40130951 -210556903 - AluSp SINE Alu -10 303 1 180 0 0 0 chr2 40130963 40130983 -210556871 + (T)n Simple_repeat Simple_repeat 1 20 0 2376 89 6 13 chr2 40131025 40131339 -210556515 - AluSp SINE Alu -1 312 1 2187 90 4 0 chr2 40131480 40131757 -210556097 - AluSg SINE Alu -32 278 1 2006 143 0 7 chr2 40133096 40133397 -210554457 + AluSx SINE Alu 1 299 -13 1030 258 54 67 chr2 40133881 40134304 -210553550 - MLT1J LTR MaLR -55 456 3 343 276 0 31 chr2 40134556 40134654 -210553200 - MIR SINE MIR -77 185 91 2039 116 18 0 chr2 40135561 40135870 -210551984 - AluSx SINE Alu 0 314 1 442 246 58 22 chr2 40135986 40136124 -210551730 - MIR SINE MIR -82 180 38 2265 113 0 0 chr2 40136346 40136646 -210551208 - AluSg SINE Alu -10 300 1 225 288 171 40 chr2 40137172 40137394 -210550460 - L2 LINE L2 -185 3087 2837 2313 102 0 0 chr2 40137844 40138139 -210549715 - AluSq SINE Alu -18 295 1 202 143 24 0 chr2 40138568 40138610 -210549244 + T-rich Low_complexity Low_complexity 3 45 0 195 245 0 0 chr2 40139086 40139135 -210548719 - L2 LINE L2 -3 3269 3221 440 284 16 0 chr2 40139217 40139344 -210548510 + MIR SINE MIR 124 252 -10 1219 156 0 82 chr2 40139417 40139648 -210548206 + AluJo SINE Alu 85 296 -16 796 282 136 40 chr2 40139649 40140139 -210547715 + L2 LINE L2 2713 3270 -43 698 103 33 48 chr2 40140161 40140412 -210547442 + GA-rich Low_complexity Low_complexity 1 247 0 359 277 85 0 chr2 40140539 40140669 -210547185 - L2 LINE L2 -1210 2104 1964 1454 223 103 65 chr2 40140987 40141158 -210546696 + MLT1F LTR MaLR 1 164 -378 2044 128 30 0 chr2 40141158 40141462 -210546392 + AluSq SINE Alu 1 313 0 1454 223 103 65 chr2 40141462 40141784 -210546070 + MLT1F LTR MaLR 164 513 -29 23 0 0 0 chr2 40142379 40142402 -210545452 + AT_rich Low_complexity Low_complexity 1 23 0 2146 94 13 26 chr2 40142406 40142714 -210545140 + AluSx SINE Alu 1 304 -8 473 128 26 0 chr2 40143823 40143901 -210543953 - MER116 DNA Mariner 0 80 1 1723 175 16 3 chr2 40144191 40144494 -210543360 + AluJo SINE Alu 5 311 -1 207 0 0 0 chr2 40145218 40145241 -210542613 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 2365 93 3 0 chr2 40145384 40145684 -210542170 - AluSg SINE Alu -9 301 1 625 261 74 39 chr2 40146646 40146849 -210541005 + MIR SINE MIR 50 259 -3 2288 119 0 0 chr2 40147107 40147419 -210540435 - AluSx SINE Alu 0 312 1 802 264 67 31 chr2 40149666 40150022 -210537832 - L1ME4a LINE L1 -137 5984 5616 706 208 23 8 chr2 40150883 40151013 -210536841 + FLAM_C SINE Alu 1 132 -1 246 167 0 0 chr2 40151102 40151138 -210536716 - U2 snRNA snRNA -152 36 1 452 227 150 72 chr2 40151191 40151223 -210536631 + MIR SINE MIR 40 68 -194 1836 144 26 10 chr2 40151223 40151529 -210536325 - AluJo SINE Alu -1 311 1 452 227 150 72 chr2 40151529 40151703 -210536151 + MIR SINE MIR 68 262 0 1750 171 7 0 chr2 40151703 40151990 -210535864 + AluSx SINE Alu 1 289 -23 330 333 88 10 chr2 40152131 40152323 -210535531 + L2 LINE L2 2071 2277 -1037 249 352 9 19 chr2 40152463 40152568 -210535286 + MER5B DNA MER1_type 1 104 -74 1306 166 14 0 chr2 40152642 40152865 -210534989 - AluJo SINE Alu 0 312 87 187 43 0 0 chr2 40153181 40153204 -210534650 + (T)n Simple_repeat Simple_repeat 1 180 0 2843 26 0 0 chr2 40153204 40153515 -210534339 - AluY SINE Alu 0 334 1 2183 106 0 3 chr2 40153529 40153822 -210534032 - AluSq SINE Alu -21 292 1 2744 135 17 43 chr2 40153823 40154283 -210533571 - LTR26 LTR ERV1 -155 448 1 1329 83 0 0 chr2 40154491 40154660 -210533194 - AluSc SINE Alu -3 306 138 541 104 13 0 chr2 40154661 40154738 -210533116 - AluS SINE Alu -234 79 2 255 179 0 0 chr2 40154802 40154841 -210533013 - Alu SINE Alu -259 41 3 2132 133 3 0 chr2 40155004 40155304 -210532550 - AluSx SINE Alu -11 301 1 224 219 375 0 chr2 40155584 40155712 -210532142 + MIR SINE MIR 86 261 -1 180 275 144 38 chr2 40156099 40156259 -210531595 - MIR3 SINE MIR -16 192 16 21 0 0 0 chr2 40156952 40156973 -210530881 + GC_rich Low_complexity Low_complexity 1 21 0 1224 155 11 114 chr2 40157691 40157785 -210530069 - MER8 DNA MER2_type -1 238 136 2692 46 0 0 chr2 40157785 40158092 -210529762 + AluY SINE Alu 1 307 -4 1224 155 11 114 chr2 40158092 40158108 -210529746 - MER8 DNA MER2_type -103 136 120 1958 154 7 3 chr2 40158108 40158413 -210529441 + AluJo SINE Alu 6 311 -1 1224 155 11 114 chr2 40158413 40158565 -210529289 - MER8 DNA MER2_type -119 120 2 642 228 251 4 chr2 40158569 40158832 -210529022 + L2 LINE L2 2986 3313 0 420 273 68 30 chr2 40158880 40159012 -210528842 - L2 LINE L2 -2 3270 3134 2899 223 57 58 chr2 40159081 40159202 -210528652 - L1M4c LINE L1 -3278 3104 2984 2361 88 0 10 chr2 40159202 40159499 -210528355 + AluSx SINE Alu 1 294 -18 2899 223 57 58 chr2 40159499 40160306 -210527548 - L1M4c LINE L1 -3398 2984 2175 1927 168 48 41 chr2 40160306 40160484 -210527370 + MSTD LTR MaLR 1 176 -220 2115 93 27 27 chr2 40160484 40160784 -210527070 + AluY SINE Alu 1 300 -11 1927 168 48 41 chr2 40160784 40160998 -210526856 + MSTD LTR MaLR 176 396 0 2899 223 57 58 chr2 40160998 40161577 -210526277 - L1M4c LINE L1 -4207 2175 1597 2211 79 0 7 chr2 40161581 40161860 -210525994 - AluY SINE Alu 0 311 35 225 321 71 0 chr2 40162265 40162349 -210525505 - MIR3 SINE MIR -42 166 77 24 32 0 0 chr2 40162634 40162665 -210525189 + AT_rich Low_complexity Low_complexity 1 31 0 271 192 0 0 chr2 40162715 40162767 -210525087 - HAL1 LINE L1 -120 2387 2336 1738 155 7 17 chr2 40162854 40163151 -210524703 + AluJo SINE Alu 1 294 -18 1695 204 90 43 chr2 40163178 40163582 -210524272 - L1ME3 LINE L1 -3 6159 5776 2076 137 0 3 chr2 40163582 40163874 -210523980 - AluSx SINE Alu -21 291 1 1695 204 90 43 chr2 40163874 40164260 -210523594 - L1ME3 LINE L1 -386 5776 5323 992 178 0 18 chr2 40164262 40164425 -210523429 - AluJb SINE Alu -23 289 130 923 247 59 7 chr2 40164439 40164726 -210523128 - L1ME3 LINE L1 -1029 5117 4816 446 180 34 0 chr2 40164752 40164841 -210523013 - L1ME3 LINE L1 -1587 4559 4468 642 203 0 8 chr2 40164905 40165028 -210522826 - FLAM_A SINE Alu -11 122 1 450 184 56 101 chr2 40165076 40165255 -210522599 - HAL1 LINE L1 -648 1859 1689 2242 180 78 118 chr2 40165260 40165983 -210521871 - LTR8A LTR ERV1 0 727 34 2253 259 89 90 chr2 40165989 40166141 -210521713 - HAL1 LINE L1 -882 1625 1474 2262 109 3 0 chr2 40166141 40166445 -210521409 - AluSg SINE Alu -5 305 1 2253 259 89 90 chr2 40166445 40166761 -210521093 - HAL1 LINE L1 -1033 1474 1159 2065 114 23 10 chr2 40166761 40167060 -210520794 - AluSc SINE Alu -6 303 1 2253 259 89 90 chr2 40167060 40167534 -210520320 - HAL1 LINE L1 -1348 1159 686 2297 109 0 0 chr2 40167534 40167828 -210520026 - AluSx SINE Alu -18 294 1 2253 259 89 90 chr2 40167828 40168463 -210519391 - HAL1 LINE L1 -1821 686 48 1337 205 92 52 chr2 40168773 40169154 -210518700 - MSTD LTR MaLR 0 396 1 225 0 0 0 chr2 40169477 40169502 -210518352 + (TG)n Simple_repeat Simple_repeat 1 25 0 277 314 145 8 chr2 40170448 40170572 -210517282 - MIR SINE MIR -115 147 7 2212 141 0 0 chr2 40171221 40171526 -210516328 - AluSx SINE Alu -7 305 1 978 151 13 113 chr2 40171986 40172224 -210515630 - AluJo SINE Alu -13 299 86 449 161 11 0 chr2 40173122 40173209 -210514645 + GA-rich Low_complexity Low_complexity 4 91 0 2760 120 11 25 chr2 40174265 40174699 -210513155 - MSTA LTR MaLR 0 428 1 1976 101 31 0 chr2 40175035 40175327 -210512527 - AluSx SINE Alu 0 317 18 331 237 62 98 chr2 40175797 40175991 -210511863 - MIR3 SINE MIR 0 208 22 440 253 0 6 chr2 40176057 40176085 -210511769 + (TA)n Simple_repeat Simple_repeat 1 28 -141 796 172 0 30 chr2 40176085 40176219 -210511635 + FLAM_C SINE Alu 1 130 -3 440 253 0 6 chr2 40176219 40176360 -210511494 + (TA)n Simple_repeat Simple_repeat 28 169 0 842 224 38 61 chr2 40176495 40176759 -210511095 - MER102a DNA MER1_type 0 330 73 2150 100 3 7 chr2 40177304 40177594 -210510260 - AluY SINE Alu -17 294 6 2392 100 0 0 chr2 40179234 40179534 -210508320 - AluSx SINE Alu -12 300 1 1085 126 0 60 chr2 40180082 40180264 -210507590 - AluJb SINE Alu -5 307 137 198 0 0 0 chr2 40180264 40180286 -210507568 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2156 73 26 0 chr2 40180289 40180561 -210507293 - AluY SINE Alu -24 287 9 466 280 28 7 chr2 40180630 40180773 -210507081 - MIR SINE MIR -70 192 47 681 304 29 0 chr2 40180822 40181026 -210506828 + MIR SINE MIR 47 256 -6 578 235 122 25 chr2 40181976 40182172 -210505682 - L2 LINE L2 -1 3312 3098 1317 86 145 0 chr2 40183309 40183495 -210504359 - AluSq SINE Alu -15 298 86 935 70 0 0 chr2 40183495 40183610 -210504244 - AluSq/x SINE Alu -163 150 36 358 168 131 9 chr2 40183913 40184020 -210503834 - L1MC5 LINE L1 -35 7926 7807 27 62 0 0 chr2 40185121 40185169 -210502685 + GC_rich Low_complexity Low_complexity 1 48 0 462 318 128 39 chr2 40186191 40186496 -210501358 - L2 LINE L2 0 3272 2941 2258 88 0 32 chr2 40187319 40187627 -210500227 + AluY SINE Alu 1 298 -13 222 346 0 0 chr2 40187688 40187766 -210500088 + (TATATG)n Simple_repeat Simple_repeat 6 83 0 506 200 147 27 chr2 40187989 40188139 -210499715 + MIR SINE MIR 19 186 -76 364 125 159 23 chr2 40188268 40188356 -210499498 + MER5A DNA MER1_type 7 106 -83 3588 86 4 2 chr2 40188421 40188885 -210498969 - Charlie3 DNA MER1_type -4 2706 2242 * 3745 92 24 10 chr2 40188879 40189371 -210498483 - Charlie3 DNA MER1_type -2210 500 2 434 272 48 0 chr2 40189410 40189535 -210498319 - MER5A DNA MER1_type -58 131 1 2025 107 3 14 chr2 40192174 40192465 -210495389 - AluSx SINE Alu -24 288 1 252 0 0 0 chr2 40192522 40192550 -210495304 + (T)n Simple_repeat Simple_repeat 1 28 0 350 286 265 0 chr2 40192706 40192940 -210494914 + L3 LINE CR1 1269 1564 -13 299 160 0 0 chr2 40195307 40195357 -210492497 + L2 LINE L2 3261 3310 -3 276 53 0 0 chr2 40198497 40198535 -210489319 + (TA)n Simple_repeat Simple_repeat 2 39 0 286 239 85 31 chr2 40200680 40200810 -210487044 + L2 LINE L2 3159 3295 -18 1399 167 31 0 chr2 40201037 40201264 -210486590 - AluJo SINE Alu -75 237 4 365 204 0 61 chr2 40201766 40201864 -210485990 + MER5A DNA MER1_type 42 133 -56 861 97 17 4 chr2 40201865 40201999 -210485855 - L1PA15 LINE L1 -9 6159 6020 2226 208 122 126 chr2 40203086 40203538 -210484316 + L2 LINE L2 1610 2063 -1250 955 134 12 47 chr2 40203538 40203710 -210484144 - FAM SINE Alu 0 49 1 2226 208 122 126 chr2 40203710 40204799 -210483055 + L2 LINE L2 2063 3313 0 307 297 127 0 chr2 40204978 40205096 -210482758 - MIR SINE MIR -5 257 125 336 306 81 0 chr2 40205558 40205669 -210482185 + MIR3 SINE MIR 81 200 -8 1226 181 0 5 chr2 40211058 40211268 -210476586 - AluJo SINE Alu -19 293 85 548 231 135 6 chr2 40215591 40215747 -210472107 - MER5B DNA MER1_type -1 177 2 591 188 14 62 chr2 40217546 40217690 -210470164 + FLAM_C SINE Alu 6 142 -1 1908 156 0 3 chr2 40217752 40218047 -210469807 - AluJo SINE Alu -18 294 1 277 296 82 10 chr2 40218242 40218340 -210469514 - MIR SINE MIR -142 120 16 21 0 0 0 chr2 40218551 40218572 -210469282 + AT_rich Low_complexity Low_complexity 1 21 0 1492 147 83 7 chr2 40218607 40218907 -210468947 + MER33 DNA MER1_type 2 324 0 1105 171 118 0 chr2 40219121 40219332 -210468522 - MER46A DNA MER2_type 0 236 1 1981 108 7 24 chr2 40220678 40220975 -210466879 - AluSx SINE Alu -19 293 2 24 32 0 0 chr2 40221642 40221673 -210466181 + AT_rich Low_complexity Low_complexity 1 31 0 294 98 20 20 chr2 40222206 40222257 -210465597 + L1MDa LINE L1 1800 1850 -4690 27 0 0 0 chr2 40222817 40222844 -210465010 + AT_rich Low_complexity Low_complexity 1 27 0 2208 87 0 4 chr2 40222854 40223130 -210464724 - AluSx SINE Alu -30 282 8 578 210 114 30 chr2 40223141 40223308 -210464546 + MIR SINE MIR 82 262 0 354 305 115 32 chr2 40224468 40224747 -210463107 - L2 LINE L2 -596 2718 2417 276 177 65 16 chr2 40224847 40224909 -210462945 - Charlie7 DNA MER1_type 0 2612 2548 336 196 78 10 chr2 40224986 40225088 -210462766 - Charlie7 DNA MER1_type -2468 144 36 263 342 29 96 chr2 40225148 40225420 -210462434 + L2 LINE L2 3018 3271 -1 1842 158 0 14 chr2 40225658 40225949 -210461905 - AluSx SINE Alu -25 287 1 2196 82 10 30 chr2 40226621 40226924 -210460930 + AluSq SINE Alu 1 297 -16 295 300 91 0 chr2 40227112 40227222 -210460632 + L2 LINE L2 3153 3272 0 1815 167 0 7 chr2 40227369 40227668 -210460186 + AluJb SINE Alu 1 297 -15 1000 179 27 49 chr2 40228413 40228637 -210459217 - MER20 DNA MER1_type 0 219 1 2216 68 44 17 chr2 40228720 40229015 -210458839 + AluY SINE Alu 1 303 -8 256 271 103 65 chr2 40229345 40229607 -210458247 + L1ME4a LINE L1 5354 5625 -496 478 188 0 12 chr2 40229612 40229692 -210458162 - MER44D DNA MER2_type -1 604 526 216 97 0 0 chr2 40229692 40229723 -210458131 + (CATA)n Simple_repeat Simple_repeat 2 32 0 646 143 130 2 chr2 40229725 40229883 -210457971 - MER44D DNA MER2_type -122 483 1 401 272 99 9 chr2 40229884 40230116 -210457738 + L1ME4a LINE L1 5628 5880 -241 21 71 0 0 chr2 40231528 40231570 -210456284 + AT_rich Low_complexity Low_complexity 1 42 0 365 43 0 0 chr2 40232266 40232313 -210455541 - MADE1 DNA Mariner -33 47 1 2420 266 141 35 chr2 40232337 40232395 -210455459 + L1M4b LINE L1 11 61 -6798 288 111 0 0 chr2 40232395 40232440 -210455414 + (CA)n Simple_repeat Simple_repeat 2 46 0 2420 266 141 35 chr2 40232440 40233356 -210454498 + L1M4b LINE L1 61 1088 -5771 1526 199 8 63 chr2 40233402 40233870 -210453984 + L1M4b LINE L1 1290 1733 -5122 654 233 75 75 chr2 40233878 40234213 -210453641 + L1M4b LINE L1 2366 2700 -4438 374 269 47 103 chr2 40234298 40234618 -210453236 + L1M4b LINE L1 2617 2918 -4041 2251 122 0 0 chr2 40234620 40234931 -210452923 + AluSx SINE Alu 1 311 -1 979 188 18 0 chr2 40234938 40235108 -210452746 + AluSg/x SINE Alu 130 302 -10 2242 106 0 16 chr2 40235471 40235783 -210452071 - AluSq SINE Alu -6 307 1 684 240 73 34 chr2 40236284 40236488 -210451366 - MIR SINE MIR -3 259 48 260 298 64 11 chr2 40236567 40236661 -210451193 - MIR SINE MIR -28 234 136 43 35 0 0 chr2 40236944 40237001 -210450853 + AT_rich Low_complexity Low_complexity 1 57 0 517 339 32 21 chr2 40237509 40237698 -210450156 - MIR3 SINE MIR 0 208 18 28 0 0 0 chr2 40238743 40238771 -210449083 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr2 40239303 40239343 -210448511 + AT_rich Low_complexity Low_complexity 1 40 0 216 0 0 0 chr2 40240389 40240413 -210447441 + (T)n Simple_repeat Simple_repeat 1 24 0 311 304 27 27 chr2 40241690 40241802 -210446052 - MIR SINE MIR -76 132 21 24 0 0 0 chr2 40244319 40244343 -210443511 + AT_rich Low_complexity Low_complexity 1 24 0 220 386 44 0 chr2 40244669 40244783 -210443071 + MIR3 SINE MIR 37 155 -53 21 57 0 0 chr2 40245543 40245578 -210442276 + AT_rich Low_complexity Low_complexity 1 35 0 198 0 0 0 chr2 40246112 40246134 -210441720 + (A)n Simple_repeat Simple_repeat 1 22 0 25 0 0 0 chr2 40246770 40246795 -210441059 + AT_rich Low_complexity Low_complexity 1 25 0 181 326 186 23 chr2 40246880 40246966 -210440888 + MIR3 SINE MIR 55 154 -54 369 241 79 65 chr2 40249195 40249336 -210438518 + MIR SINE MIR 38 178 -62 491 191 0 0 chr2 40249709 40249793 -210438061 + AluJ/FLAM SINE Alu 1 84 -228 22 35 0 0 chr2 40249800 40249829 -210438025 + AT_rich Low_complexity Low_complexity 1 29 0 1931 144 0 32 chr2 40249933 40250246 -210437608 - AluSx SINE Alu -9 303 1 2419 88 0 0 chr2 40250661 40250969 -210436885 + AluSg SINE Alu 1 308 -2 1093 92 61 0 chr2 40251350 40251513 -210436341 + MER30 DNA MER1_type 1 173 -57 1925 108 76 7 chr2 40252417 40252694 -210435160 - AluSg SINE Alu -14 296 1 21 0 0 0 chr2 40253375 40253396 -210434458 + AT_rich Low_complexity Low_complexity 1 21 0 1859 163 10 3 chr2 40253930 40254237 -210433617 + AluJb SINE Alu 1 309 -3 1657 180 20 16 chr2 40254473 40254779 -210433075 + AluJo SINE Alu 3 309 -3 204 97 0 0 chr2 40254816 40254847 -210433007 + (A)n Simple_repeat Simple_repeat 1 31 0 1722 180 3 20 chr2 40254868 40255162 -210432692 + AluJo SINE Alu 1 289 -23 1847 199 16 59 chr2 40255274 40255762 -210432092 + MLT1C LTR MaLR 1 467 0 1891 134 22 0 chr2 40256034 40256337 -210431517 + AluSx SINE Alu 1 309 0 1648 154 60 6 chr2 40256592 40256924 -210430930 - L1MA8 LINE L1 0 6291 5942 296 314 132 0 chr2 40257088 40257209 -210430645 - L2 LINE L2 0 3272 3136 1822 115 4 19 chr2 40257267 40257528 -210430326 + AluSx SINE Alu 3 259 -53 1076 133 0 0 chr2 40257648 40257806 -210430048 - AluSp SINE Alu -4 309 152 1817 157 7 10 chr2 40258123 40258422 -210429432 - AluJo SINE Alu -13 299 2 243 167 0 0 chr2 40259546 40259612 -210428242 + A-rich Low_complexity Low_complexity 1 66 0 1655 146 0 79 chr2 40260940 40261159 -210426695 - AluJb SINE Alu -21 291 103 2458 53 0 7 chr2 40261159 40261461 -210426393 - AluY SINE Alu -11 300 1 1655 146 0 79 chr2 40261461 40261557 -210426297 - AluJb SINE Alu -209 103 1 198 303 49 74 chr2 40261575 40261697 -210426157 + MIR3 SINE MIR 8 126 -82 244 223 91 22 chr2 40262033 40262139 -210425715 - L1MC/D LINE L1 -360 5804 5691 907 151 102 38 chr2 40262149 40262335 -210425519 + Tigger1 DNA MER2_type 1 198 -2220 7846 116 45 14 chr2 40262337 40263040 -210424814 + Tigger1 DNA MER2_type 1125 1884 -534 2445 75 0 0 chr2 40263040 40263335 -210424519 + AluSc SINE Alu 1 295 -14 7846 116 45 14 chr2 40263335 40263887 -210423967 + Tigger1 DNA MER2_type 1884 2418 0 585 250 62 40 chr2 40263952 40264228 -210423626 - L1MC/D LINE L1 -588 5574 5293 1693 177 16 31 chr2 40264233 40264589 -210423265 - L1MB8 LINE L1 -1 6177 5826 2466 64 0 19 chr2 40264589 40264903 -210422951 - AluY SINE Alu -3 308 1 1693 177 16 31 chr2 40264903 40264931 -210422923 - L1MB8 LINE L1 -352 5826 5799 3590 149 43 34 chr2 40264931 40265656 -210422198 - L1MB4 LINE L1 0 6180 5428 1153 186 10 0 chr2 40265658 40265857 -210421997 - AluJo SINE Alu -25 287 87 1659 154 87 4 chr2 40265857 40266306 -210421548 - L1MB4 LINE L1 -743 5403 4941 813 277 140 67 chr2 40266322 40266978 -210420876 - L1MC/D LINE L1 -960 5186 4579 2172 109 0 3 chr2 40266978 40267289 -210420565 - AluSg SINE Alu 0 310 1 813 277 140 67 chr2 40267289 40267820 -210420034 - L1MC/D LINE L1 -1567 4579 3912 1206 177 72 35 chr2 40268123 40268480 -210419374 - MSTC LTR MaLR -12 416 1 1500 160 21 0 chr2 40268661 40268898 -210418956 + AluSx SINE Alu 1 242 -70 318 347 72 0 chr2 40268939 40269106 -210418748 - L1MC/D LINE L1 -2968 3178 3000 268 204 0 19 chr2 40269107 40269161 -210418693 + MSTC LTR MaLR 23 75 -353 1202 180 0 84 chr2 40269164 40269425 -210418429 - MER8 DNA MER2_type 0 239 1 198 167 0 0 chr2 40269428 40269464 -210418390 + (CA)n Simple_repeat Simple_repeat 2 37 0 1111 171 90 66 chr2 40269467 40269801 -210418053 + MER2 DNA MER2_type 3 344 0 366 23 0 0 chr2 40269814 40269857 -210417997 + (GA)n Simple_repeat Simple_repeat 1 43 0 270 0 0 0 chr2 40269856 40269886 -210417968 + (TG)n Simple_repeat Simple_repeat 2 31 0 * 455 291 68 29 chr2 40269896 40270281 -210417573 - L1MC/D LINE L1 -3525 2621 2212 2146 115 3 16 chr2 40270281 40270594 -210417260 - AluSg SINE Alu -1 309 1 455 291 68 29 chr2 40270594 40270690 -210417164 - L1MC/D LINE L1 -3934 2212 2121 26 0 0 0 chr2 40271041 40271067 -210416787 + AT_rich Low_complexity Low_complexity 1 26 0 2242 90 10 0 chr2 40271078 40271378 -210416476 - AluSx SINE Alu -4 308 6 1354 207 242 22 chr2 40271588 40272182 -210415672 - L1ME3 LINE L1 -47 6115 5315 1867 155 16 10 chr2 40272246 40272549 -210415305 - AluSx SINE Alu -7 305 1 874 268 15 7 chr2 40272549 40272814 -210415040 - L1ME3 LINE L1 -861 5285 5016 576 289 87 47 chr2 40272811 40272980 -210414874 - L1MEd LINE L1 -880 1610 1449 * 2088 139 0 3 chr2 40272980 40273283 -210414571 - AluSx SINE Alu -10 302 1 576 289 87 47 chr2 40273283 40273517 -210414337 - L1MEd LINE L1 -1041 1449 1226 2191 92 21 0 chr2 40273517 40273799 -210414055 - AluSx SINE Alu -24 288 1 576 289 87 47 chr2 40273799 40274029 -210413825 - L1MEd LINE L1 -1264 1226 859 636 266 33 55 chr2 40274992 40275075 -210412779 - MIR SINE MIR -16 246 163 1170 134 129 0 chr2 40275075 40275284 -210412570 - MER46A DNA MER2_type 0 236 1 636 266 33 55 chr2 40275284 40275442 -210412412 - MIR SINE MIR -99 163 7 1515 166 67 24 chr2 40276073 40276446 -210411408 - Charlie1 DNA MER1_type 0 2761 2373 1007 120 43 128 chr2 40276460 40276718 -210411136 - L1MB7 LINE L1 -16 6168 5933 564 167 0 28 chr2 40276718 40276826 -210411028 - Charlie1 DNA MER1_type -432 2329 2225 2951 198 55 47 chr2 40276897 40277452 -210410402 - L1ME1 LINE L1 -9 6157 5593 2260 98 0 0 chr2 40277452 40277747 -210410107 + AluSx SINE Alu 1 295 -17 2951 198 55 47 chr2 40277747 40277978 -210409876 - L1ME1 LINE L1 -573 5593 5365 505 214 0 17 chr2 40278027 40278144 -210409710 - L1MB8 LINE L1 0 6178 6064 281 338 59 37 chr2 40278463 40278509 -210409345 + L2 LINE L2 3128 3172 -100 2628 37 0 0 chr2 40278509 40278807 -210409047 - AluY SINE Alu -12 299 2 281 338 59 37 chr2 40278807 40278896 -210408958 + L2 LINE L2 3172 3266 -6 337 328 90 21 chr2 40280358 40280547 -210407307 + MIR SINE MIR 12 213 -49 2172 99 44 7 chr2 40280729 40281022 -210406832 + AluSg SINE Alu 1 304 -6 356 273 0 30 chr2 40282468 40282567 -210405287 + MIR SINE MIR 59 154 -108 643 218 68 68 chr2 40284837 40284999 -210402855 + MER112 DNA MER1_type 3 167 -93 2105 130 7 0 chr2 40284999 40285306 -210402548 - AluSx SINE Alu -3 309 1 643 218 68 68 chr2 40285306 40285395 -210402459 + MER112 DNA MER1_type 166 254 -6 189 0 0 0 chr2 40285831 40285852 -210402002 + (A)n Simple_repeat Simple_repeat 1 21 0 22 35 0 0 chr2 40285909 40285938 -210401916 + AT_rich Low_complexity Low_complexity 1 29 0 1762 174 3 19 chr2 40285959 40286269 -210401585 - AluJo SINE Alu -7 305 1 2274 118 0 6 chr2 40286717 40287031 -210400823 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 40287434 40287455 -210400399 + AT_rich Low_complexity Low_complexity 1 21 0 442 154 15 0 chr2 40287580 40287645 -210400209 - MER2 DNA MER2_type 0 345 280 27 29 0 0 chr2 40287645 40287679 -210400175 + AT_rich Low_complexity Low_complexity 1 34 0 998 156 0 13 chr2 40287709 40287863 -210399991 - FRAM SINE Alu -19 157 6 1065 158 0 16 chr2 40287868 40288051 -210399803 - MER2 DNA MER2_type -164 181 2 1674 164 29 32 chr2 40288407 40288718 -210399136 - AluJb SINE Alu -2 310 1 691 167 54 18 chr2 40288733 40288901 -210398953 - L1MA8 LINE L1 -7 6284 6111 508 117 26 0 chr2 40288909 40288986 -210398868 - MLT1A1 LTR MaLR -286 79 1 514 172 66 73 chr2 40289100 40289251 -210398603 - L1MA8 LINE L1 -173 6118 5969 2062 125 3 32 chr2 40289324 40289637 -210398217 - AluSx SINE Alu -6 306 3 478 143 26 0 chr2 40289842 40289919 -210397935 + MLT1A1 LTR MaLR 1 79 -286 346 250 113 0 chr2 40290266 40290346 -210397508 + MIR SINE MIR 37 125 -137 581 231 54 8 chr2 40290349 40290479 -210397375 - L2 LINE L2 -2 3311 3176 320 188 72 0 chr2 40291573 40291642 -210396212 - MER46A DNA MER2_type -90 146 73 1444 168 0 13 chr2 40291657 40291895 -210395959 - AluJb SINE Alu -77 235 1 939 161 78 22 chr2 40291895 40292075 -210395779 + MER46A DNA MER2_type 47 236 0 2200 106 0 0 chr2 40292418 40292711 -210395143 + AluSx SINE Alu 1 293 -19 195 284 25 37 chr2 40293068 40293149 -210394705 + L2 LINE L2 3174 3253 -19 21 0 0 0 chr2 40293270 40293291 -210394563 + AT_rich Low_complexity Low_complexity 1 21 0 1227 194 0 103 chr2 40293647 40293976 -210393878 + AluJo SINE Alu 3 297 -15 200 244 0 0 chr2 40294007 40294048 -210393806 + (TA)n Simple_repeat Simple_repeat 2 42 0 2267 101 0 0 chr2 40294133 40294429 -210393425 - AluSx SINE Alu -16 296 1 214 196 130 0 chr2 40294454 40294500 -210393354 - MIR SINE MIR -121 141 90 180 369 68 19 chr2 40294568 40294671 -210393183 - MIR3 SINE MIR -99 109 2 263 307 160 31 chr2 40294915 40295234 -210392620 + L2 LINE L2 1986 2345 -969 266 319 14 0 chr2 40295382 40295451 -210392403 - L3 LINE CR1 -1 1576 1507 2154 111 0 17 chr2 40295451 40295749 -210392105 - AluSx SINE Alu -19 293 1 310 333 72 0 chr2 40296617 40296728 -210391126 - L2 LINE L2 -2 3311 3193 292 40 140 0 chr2 40297879 40297929 -210389925 - MADE1 DNA Mariner -23 57 1 2201 121 0 0 chr2 40298649 40298955 -210388899 + AluSx SINE Alu 1 306 -6 818 120 96 0 chr2 40298956 40299081 -210388773 + AluSg/x SINE Alu 82 218 -94 2315 105 3 0 chr2 40299167 40299473 -210388381 + AluSp SINE Alu 1 307 -6 194 325 103 8 chr2 40299862 40299979 -210387875 - L2 LINE L2 -876 2438 2311 571 246 0 0 chr2 40300109 40300223 -210387631 + FLAM_A SINE Alu 6 119 -23 394 259 108 25 chr2 40300242 40300558 -210387296 + L1ME3A LINE L1 3174 3515 -2631 1421 241 97 52 chr2 40300663 40300709 -210387145 + L1ME3A LINE L1 3713 3755 -2391 1566 187 42 3 chr2 40300709 40300993 -210386861 + AluJb SINE Alu 1 295 -17 1421 241 97 52 chr2 40300993 40301642 -210386212 + L1ME3A LINE L1 3755 4447 -1699 1832 138 81 0 chr2 40301642 40301925 -210385929 + AluSx SINE Alu 1 306 -6 1421 241 97 52 chr2 40301925 40301983 -210385871 + L1ME3A LINE L1 4447 4501 -1645 685 276 113 48 chr2 40302001 40303031 -210384823 + L1ME3A LINE L1 4540 5647 -515 1670 170 56 25 chr2 40303037 40303360 -210384494 + MER1B DNA MER1_type 2 334 -5 2343 97 0 7 chr2 40303361 40303669 -210384185 + AluSc SINE Alu 1 306 -3 375 281 22 5 chr2 40303737 40303922 -210383932 + L1ME3A LINE L1 5770 5957 -213 2523 79 0 0 chr2 40304069 40304374 -210383480 - AluSg SINE Alu -5 305 1 485 121 0 60 chr2 40304439 40304522 -210383332 - MER1A DNA MER1_type 0 529 452 3613 107 25 4 chr2 40304536 40305052 -210382802 - MER1A DNA MER1_type 0 527 1 1381 153 120 29 chr2 40305485 40305760 -210382094 + AluJo SINE Alu 1 300 -12 1941 139 7 3 chr2 40305819 40306122 -210381732 + AluSx SINE Alu 1 304 -8 2059 112 31 0 chr2 40306125 40306411 -210381443 + AluSx SINE Alu 2 296 -16 26 50 0 0 chr2 40306420 40306460 -210381394 + AT_rich Low_complexity Low_complexity 1 40 0 1849 99 48 4 chr2 40306505 40306777 -210381077 - L1MA2 LINE L1 -7 6297 6014 263 257 95 0 chr2 40306887 40306961 -210380893 - L2 LINE L2 -37 3276 3196 682 133 29 9 chr2 40307171 40307276 -210380578 + U6 snRNA snRNA 1 107 0 2459 174 45 13 chr2 40307348 40307795 -210380059 - MER65C LTR ERV1 0 461 1 594 262 162 35 chr2 40308186 40308430 -210379424 + L1ME4a LINE L1 5508 5720 -401 2593 111 40 8 chr2 40308430 40308808 -210379046 + MLT1B LTR MaLR 1 390 0 594 262 162 35 chr2 40308808 40308964 -210378890 + L1ME4a LINE L1 5720 5959 -162 36 0 0 0 chr2 40309190 40309226 -210378628 + AT_rich Low_complexity Low_complexity 1 36 0 1776 166 3 7 chr2 40309620 40309922 -210377932 - AluJo SINE Alu -3 309 9 229 263 62 25 chr2 40310408 40310488 -210377366 - L2 LINE L2 -69 3203 3121 259 356 29 0 chr2 40310531 40310635 -210377219 + MIR SINE MIR 9 115 -147 333 269 53 76 chr2 40310910 40311081 -210376773 - L2 LINE L2 -870 2444 2278 2256 108 0 3 chr2 40311399 40311694 -210376160 - AluSx SINE Alu -16 296 3 267 308 99 16 chr2 40312123 40312254 -210375600 + MIR SINE MIR 66 218 -44 1619 159 33 33 chr2 40312254 40312555 -210375299 - AluJb SINE Alu -11 301 1 267 308 99 16 chr2 40312555 40312605 -210375249 + MIR SINE MIR 218 262 0 340 250 43 86 chr2 40312770 40312886 -210374968 - MER5A DNA MER1_type 0 189 79 3902 168 57 22 chr2 40312901 40313657 -210374197 - L1MB3 LINE L1 0 6183 5402 1961 139 9 22 chr2 40313824 40314141 -210373713 + AluSq SINE Alu 1 313 0 673 165 0 8 chr2 40314141 40314262 -210373592 + L1MD3 LINE L1 6914 7033 -962 2049 134 0 42 chr2 40314426 40314739 -210373115 + AluSx SINE Alu 1 300 -12 2147 113 0 0 chr2 40314995 40315309 -210372545 + AluSx SINE Alu 1 314 0 241 276 0 147 chr2 40315401 40315449 -210372405 - MER5A DNA MER1_type -80 109 86 2181 133 0 0 chr2 40315449 40315750 -210372104 - AluSx SINE Alu -11 301 1 241 276 0 147 chr2 40315750 40315817 -210372037 - MER5A DNA MER1_type -103 86 11 500 293 210 12 chr2 40316137 40316475 -210371379 + L2 LINE L2 1647 2051 -1263 320 314 230 17 chr2 40316481 40316777 -210371077 + L2 LINE L2 2529 2887 -427 558 143 0 0 chr2 40316777 40316861 -210370993 - AluJ/FRAM SINE Alu -8 304 221 801 293 80 27 chr2 40316861 40317236 -210370618 + L2 LINE L2 2879 3273 -40 510 241 126 53 chr2 40318174 40318381 -210369473 - L2 LINE L2 -357 2957 2736 1530 149 92 126 chr2 40318428 40318947 -210368907 + Charlie1 DNA MER1_type 2217 2718 -43 2131 87 0 28 chr2 40318947 40319265 -210368589 + AluSg1 SINE Alu 1 310 0 1530 149 92 126 chr2 40319265 40319307 -210368547 + Charlie1 DNA MER1_type 2718 2760 -1 2511 57 0 3 chr2 40321185 40321481 -210366373 + AluY SINE Alu 1 295 -16 197 250 0 54 chr2 40321613 40321669 -210366185 + MIR3 SINE MIR 141 193 -15 740 229 54 12 chr2 40321947 40322113 -210365741 + MER5A DNA MER1_type 17 189 0 1939 151 0 22 chr2 40322132 40322444 -210365410 - AluSx SINE Alu -5 307 3 24 53 0 0 chr2 40322518 40322556 -210365298 + AT_rich Low_complexity Low_complexity 1 38 0 2215 161 56 16 chr2 40323116 40323189 -210364665 + L1MB8 LINE L1 5208 5277 -901 2205 107 0 0 chr2 40323189 40323480 -210364374 + AluY SINE Alu 1 291 -20 2215 161 56 16 chr2 40323480 40324150 -210363704 + L1MB8 LINE L1 5277 6126 -52 851 173 0 0 chr2 40324167 40324323 -210363531 + L1MA9 LINE L1 5088 5243 -903 1854 106 84 0 chr2 40324323 40324598 -210363256 - AluSx SINE Alu -14 298 1 3422 138 43 20 chr2 40324607 40325209 -210362645 + L1MA9 LINE L1 5346 5961 -351 1797 170 3 13 chr2 40325215 40325515 -210362339 + AluJb SINE Alu 1 297 -15 2251 139 57 63 chr2 40325568 40325993 -210361861 - MSTB LTR MaLR -4 422 1 2390 92 3 0 chr2 40326507 40326812 -210361042 + AluSg SINE Alu 1 306 -4 1684 184 9 35 chr2 40326824 40327140 -210360714 + AluJb SINE Alu 3 310 -2 1931 135 3 44 chr2 40327244 40327563 -210360291 + AluJb SINE Alu 1 306 -6 4146 192 39 56 chr2 40327570 40328581 -210359273 + L1MB4 LINE L1 4323 5328 -852 2088 128 0 7 chr2 40328581 40328879 -210358975 + AluSq SINE Alu 3 298 -15 4146 192 39 56 chr2 40328879 40329282 -210358572 + L1MB4 LINE L1 5328 5736 -444 1082 192 0 0 chr2 40329293 40329491 -210358363 + L1MB4 LINE L1 5792 5989 -191 622 156 8 33 chr2 40329495 40329617 -210358237 + L1MB4 LINE L1 6062 6180 0 689 152 72 24 chr2 40329872 40329997 -210357857 - FLAM_C SINE Alu -1 132 2 21 0 0 0 chr2 40330120 40330141 -210357713 + AT_rich Low_complexity Low_complexity 1 21 0 1976 139 3 10 chr2 40330197 40330498 -210357356 + AluSx SINE Alu 1 299 -13 1522 162 0 12 chr2 40330518 40330765 -210357089 + AluJb SINE Alu 3 246 -66 261 0 0 0 chr2 40330766 40330795 -210357059 + (CA)n Simple_repeat Simple_repeat 2 30 0 2804 10 0 3 chr2 40330890 40331200 -210356654 + AluYa5 SINE Alu 1 309 -2 1419 262 79 14 chr2 40331777 40332208 -210355646 + LTR16B LTR ERVL 6 464 0 195 42 0 0 chr2 40332239 40332263 -210355591 + (A)n Simple_repeat Simple_repeat 1 24 0 607 273 188 29 chr2 40332611 40333025 -210354829 + L2 LINE L2 2368 2847 -467 231 114 0 0 chr2 40333123 40333158 -210354696 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 1828 175 0 20 chr2 40333188 40333491 -210354363 + AluJo SINE Alu 1 297 -15 1765 186 0 0 chr2 40333498 40333819 -210354035 + AluJb SINE Alu 1 321 0 345 315 103 30 chr2 40334200 40334403 -210353451 + MIR SINE MIR 31 248 -14 296 192 267 20 chr2 40334452 40334598 -210353256 + L1M4 LINE L1 4663 4844 -1302 498 75 0 0 chr2 40334608 40334675 -210353179 + (TG)n Simple_repeat Simple_repeat 2 68 0 1636 163 62 20 chr2 40334679 40334985 -210352869 + MER2 DNA MER2_type 2 320 -25 399 127 0 0 chr2 40335077 40335132 -210352722 + MER66A LTR ERV1 284 338 -140 341 337 18 18 chr2 40335144 40335313 -210352541 + L1M4 LINE L1 4890 5058 -1088 243 253 60 0 chr2 40335317 40335400 -210352454 + L1M4 LINE L1 5080 5167 -979 965 134 0 0 chr2 40335400 40335534 -210352320 + AluSq/x SINE Alu 1 134 -178 2204 101 10 0 chr2 40335535 40335823 -210352031 + AluSx SINE Alu 1 291 -21 298 249 25 41 chr2 40335842 40335978 -210351876 + L1MC4 LINE L1 7779 8015 -27 998 172 54 14 chr2 40336083 40336170 -210351684 - AluJo SINE Alu -82 230 148 2586 43 0 13 chr2 40336170 40336474 -210351380 - AluY SINE Alu -11 300 1 998 172 54 14 chr2 40336474 40336607 -210351247 - AluJo SINE Alu -164 148 1 191 200 32 11 chr2 40336766 40336861 -210350993 + (TA)n Simple_repeat Simple_repeat 1 97 0 504 92 15 0 chr2 40337120 40337185 -210350669 + AluS SINE Alu 2 67 -246 2018 81 0 0 chr2 40337285 40337531 -210350323 - AluSc SINE Alu -63 246 1 581 236 34 91 chr2 40338052 40338260 -210349594 - MIR3 SINE MIR -7 201 6 728 112 10 0 chr2 40338277 40338375 -210349479 - AluSg/x SINE Alu -15 297 199 1582 159 39 12 chr2 40338382 40338639 -210349215 - AluJb SINE Alu -48 264 1 355 74 19 0 chr2 40338717 40338807 -210349047 + Alu SINE Alu 247 337 0 2155 116 7 0 chr2 40338912 40339230 -210348624 - AluSq SINE Alu 0 313 1 27 0 0 0 chr2 40339293 40339320 -210348534 + AT_rich Low_complexity Low_complexity 1 27 0 871 115 0 8 chr2 40339444 40339566 -210348288 + AluSq/x SINE Alu 14 134 -179 2228 95 10 7 chr2 40339695 40339999 -210347855 + AluSx SINE Alu 1 305 -7 360 0 0 0 chr2 40340000 40340040 -210347814 + (TA)n Simple_repeat Simple_repeat 1 40 0 1344 247 77 70 chr2 40340049 40340592 -210347262 - MLT1H LTR MaLR 0 549 3 1871 115 4 4 chr2 40341639 40341892 -210345962 + AluSx SINE Alu 1 253 -59 2254 96 13 0 chr2 40342285 40342588 -210345266 - AluSp SINE Alu -6 307 1 2129 110 3 17 chr2 40342588 40342888 -210344966 - AluSg SINE Alu -14 296 1 186 43 0 0 chr2 40343082 40343105 -210344749 + (GAA)n Simple_repeat Simple_repeat 2 24 0 518 324 55 34 chr2 40343113 40343162 -210344692 - L1MC4 LINE L1 -772 7270 7224 1019 183 63 0 chr2 40343162 40343337 -210344517 + MER5A DNA MER1_type 2 187 -2 518 324 55 34 chr2 40343337 40343667 -210344187 - L1MC4 LINE L1 -818 7224 6883 22 0 0 0 chr2 40344382 40344404 -210343450 + AT_rich Low_complexity Low_complexity 1 22 0 493 173 79 0 chr2 40344431 40344558 -210343296 + L1MB7 LINE L1 6045 6181 -3 1025 90 8 0 chr2 40344616 40344749 -210343105 + AluSq/x SINE Alu 2 135 -177 1935 142 0 0 chr2 40344749 40345060 -210342794 + AluSg SINE Alu 1 311 0 382 203 56 77 chr2 40345423 40345566 -210342288 + L1ME LINE L1 5620 5759 -362 1747 127 82 4 chr2 40345739 40346007 -210341847 - AluSx SINE Alu -23 289 1 189 0 0 0 chr2 40346252 40346273 -210341581 + (T)n Simple_repeat Simple_repeat 1 21 0 1562 181 10 46 chr2 40346573 40346877 -210340977 + AluJb SINE Alu 11 303 -9 430 210 239 36 chr2 40347044 40347182 -210340672 - MER5A DNA MER1_type -2 187 11 2058 134 0 10 chr2 40347543 40347835 -210340019 - AluSx SINE Alu -23 289 1 183 100 0 0 chr2 40348028 40348058 -210339796 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 1507 155 91 8 chr2 40348670 40348935 -210338919 + AluJo SINE Alu 1 287 -25 28 0 0 0 chr2 40349173 40349201 -210338653 + AT_rich Low_complexity Low_complexity 1 28 0 2224 115 0 0 chr2 40349201 40349505 -210338349 - AluSx SINE Alu -8 304 1 1746 171 3 0 chr2 40349929 40350221 -210337633 - AluJb SINE Alu -19 293 1 1858 67 7 100 chr2 40350945 40351244 -210336610 + AluSx SINE Alu 3 273 -39 537 200 0 0 chr2 40351349 40351434 -210336420 - AluSg/x SINE Alu -38 271 187 303 271 53 68 chr2 40351437 40351488 -210336366 - L1MC4a LINE L1 -1875 5933 5883 2134 145 3 0 chr2 40351488 40351792 -210336062 - AluJb SINE Alu -7 305 1 303 271 53 68 chr2 40351792 40351873 -210335981 - L1MC4a LINE L1 -1925 5883 5803 249 151 41 123 chr2 40351938 40352011 -210335843 + L1ME LINE L1 5830 5896 -225 2007 139 0 0 chr2 40352562 40352842 -210335012 + AluSx SINE Alu 1 280 -32 213 65 0 0 chr2 40352843 40352874 -210334980 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 756 177 0 57 chr2 40352999 40353140 -210334714 - FLAM_C SINE Alu 0 133 1 2451 192 101 9 chr2 40353149 40353686 -210334168 - L1MD3 LINE L1 0 7995 7410 473 197 1 11 chr2 40353687 40353787 -210334067 - MLT1F1 LTR MaLR -442 125 35 342 165 12 47 chr2 40353787 40353872 -210333982 - L1MD3 LINE L1 -879 7116 7035 274 284 136 0 chr2 40354000 40354081 -210333773 + MIR SINE MIR 19 110 -152 235 161 143 0 chr2 40354182 40354238 -210333616 + AluSc SINE Alu 236 299 0 2311 77 10 3 chr2 40354405 40354703 -210333151 - AluSq SINE Alu -13 300 1 184 324 68 14 chr2 40354709 40354783 -210333071 + L2 LINE L2 3234 3311 -2 338 342 199 23 chr2 40355344 40355645 -210332209 - L2 LINE L2 -4 3268 2915 958 253 39 32 chr2 40355945 40356230 -210331624 - MER102b DNA MER1_type -45 296 10 56 55 0 0 chr2 40357941 40358032 -210329822 + GC_rich Low_complexity Low_complexity 1 91 0 252 59 0 0 chr2 40358237 40358271 -210329583 + (CCG)n Simple_repeat Simple_repeat 1 34 0 186 103 0 0 chr2 40358389 40358418 -210329436 + (GA)n Simple_repeat Simple_repeat 1 29 0 180 147 0 0 chr2 40359182 40359216 -210328638 - MIR SINE MIR -63 199 166 2265 98 0 10 chr2 40359414 40359711 -210328143 + AluSq SINE Alu 1 294 -19 294 29 0 0 chr2 40359714 40359749 -210328105 + (CA)n Simple_repeat Simple_repeat 2 36 0 686 86 0 0 chr2 40359754 40359847 -210328007 + AluS SINE Alu 2 94 -219 666 168 82 8 chr2 40360357 40360522 -210327332 + L1ME LINE L1 5634 5806 -358 1229 176 69 50 chr2 40360580 40360740 -210327114 + L1ME1 LINE L1 5657 5812 -354 2062 130 0 70 chr2 40360740 40361071 -210326783 + AluJb SINE Alu 1 308 -4 1229 176 69 50 chr2 40361071 40361230 -210326624 + L1ME1 LINE L1 5812 5980 -186 624 182 0 8 chr2 40361240 40361372 -210326482 + L1MA10 LINE L1 6203 6333 -1 2045 129 27 3 chr2 40361580 40361874 -210325980 + AluSx SINE Alu 1 301 -11 2445 90 6 0 chr2 40361876 40362187 -210325667 + AluSp SINE Alu 1 313 0 1095 189 0 5 chr2 40362198 40362394 -210325460 + AluJb SINE Alu 118 312 0 182 344 109 8 chr2 40362394 40362522 -210325332 - L2 LINE L2 -1321 1993 1853 263 267 208 0 chr2 40362782 40362883 -210324971 - MIR SINE MIR -49 213 92 202 139 0 23 chr2 40362900 40362943 -210324911 + (TTTTTA)n Simple_repeat Simple_repeat 2 43 0 1427 185 58 25 chr2 40362997 40363273 -210324581 + AluJo SINE Alu 2 286 -26 2028 130 13 7 chr2 40363414 40363721 -210324133 - AluSx SINE Alu -3 309 1 966 153 38 0 chr2 40363855 40364012 -210323842 + AluJb SINE Alu 141 303 -9 1906 128 24 7 chr2 40364137 40364426 -210323428 + AluJb SINE Alu 2 295 -17 275 296 0 10 chr2 40364893 40364991 -210322863 + (TA)n Simple_repeat Simple_repeat 1 97 0 1987 121 8 0 chr2 40366482 40366746 -210321108 - AluSx SINE Alu -46 266 1 2234 77 7 0 chr2 40367417 40367689 -210320165 - AluSq SINE Alu -12 301 28 2246 111 3 0 chr2 40367691 40367997 -210319857 - AluSx SINE Alu 0 312 6 227 298 48 65 chr2 40368446 40368570 -210319284 - L2 LINE L2 0 3313 3192 704 238 21 47 chr2 40369266 40369459 -210318395 + MER5A DNA MER1_type 2 189 0 460 141 272 0 chr2 40369772 40369864 -210317990 + FLAM_C SINE Alu 1 117 -26 2183 120 13 0 chr2 40370337 40370637 -210317217 - AluSx SINE Alu -8 304 1 714 294 54 49 chr2 40370684 40371150 -210316704 + L2 LINE L2 1840 2307 -1007 1346 246 46 11 chr2 40371163 40371513 -210316341 + MLT1C LTR MaLR 1 362 -105 1779 175 7 29 chr2 40371632 40371941 -210315913 - AluJo SINE Alu -10 302 1 2069 103 43 4 chr2 40372650 40372931 -210314923 + AluSc SINE Alu 1 292 -17 380 307 25 19 chr2 40373607 40373780 -210314074 - MER5A DNA MER1_type -3 186 2 333 118 0 0 chr2 40374347 40374398 -210313456 + (TG)n Simple_repeat Simple_repeat 2 52 0 1622 192 3 3 chr2 40374399 40374685 -210313169 - AluJo SINE Alu -26 286 1 188 256 0 0 chr2 40374937 40374980 -210312874 + MIR SINE MIR 111 153 -55 2215 114 6 22 chr2 40375168 40375483 -210312371 + AluSx SINE Alu 1 310 -2 401 308 27 0 chr2 40375736 40375882 -210311972 + MIR SINE MIR 107 256 -6 1512 133 35 18 chr2 40375948 40376233 -210311621 + L1MA8 LINE L1 6002 6291 0 23 0 0 0 chr2 40377326 40377349 -210310505 + AT_rich Low_complexity Low_complexity 1 23 0 2053 125 7 3 chr2 40377349 40377638 -210310216 - AluSx SINE Alu -22 290 1 303 246 92 42 chr2 40377650 40377792 -210310062 - MIR3 SINE MIR -11 197 49 2210 110 0 0 chr2 40378479 40378761 -210309093 - AluSx SINE Alu -28 284 3 625 90 0 0 chr2 40379277 40379366 -210308488 - AluSx SINE Alu -9 300 212 1176 145 0 0 chr2 40379367 40379533 -210308321 - AluSx SINE Alu -146 166 1 1352 170 112 23 chr2 40379561 40379846 -210308008 - AluJb SINE Alu 0 308 1 2120 138 3 0 chr2 40380022 40380326 -210307528 + AluJb SINE Alu 1 305 -7 991 137 159 56 chr2 40380909 40381139 -210306715 + AluJo SINE Alu 5 268 -34 2237 98 7 10 chr2 40381139 40381436 -210306418 - AluSq SINE Alu -17 296 1 991 137 159 56 chr2 40381436 40381475 -210306379 + AluJo SINE Alu 268 302 0 2487 64 3 22 chr2 40381515 40381829 -210306025 - AluY SINE Alu -2 309 2 2275 53 0 4 chr2 40381939 40382204 -210305650 - AluY SINE Alu -47 264 1 2657 48 0 10 chr2 40383060 40383374 -210304480 - AluY SINE Alu 0 311 1 2134 89 7 0 chr2 40383467 40383800 -210304054 - AluSg SINE Alu 0 335 1 235 299 39 0 chr2 40384265 40384342 -210303512 + MIR SINE MIR 93 172 -90 877 158 0 0 chr2 40384481 40384614 -210303240 + FLAM_C SINE Alu 1 133 -10 1955 106 22 4 chr2 40384618 40384893 -210302961 + AluSx SINE Alu 3 282 -30 474 398 33 18 chr2 40384930 40385325 -210302529 - L2 LINE L2 -1863 1451 1051 207 0 0 0 chr2 40385326 40385349 -210302505 + (TAA)n Simple_repeat Simple_repeat 3 25 0 2010 139 0 40 chr2 40385485 40385808 -210302046 - AluSx SINE Alu -2 310 1 259 304 11 0 chr2 40385846 40385938 -210301916 + L1M4 LINE L1 3745 3837 -2309 1683 244 66 29 chr2 40385987 40386494 -210301360 - MLT1G3 LTR MaLR 0 530 20 2845 174 57 8 chr2 40386498 40387026 -210300828 - MLT2B3 LTR ERVL 0 554 1 25 0 0 0 chr2 40387059 40387084 -210300770 + AT_rich Low_complexity Low_complexity 1 25 0 352 137 0 0 chr2 40387112 40387163 -210300691 - ERVL-B3 LTR ERVL -32 5732 5682 1625 161 49 26 chr2 40387163 40387468 -210300386 + AluJo SINE Alu 1 312 0 230 0 33 0 chr2 40387470 40387500 -210300354 + (GGAA)n Simple_repeat Simple_repeat 1 31 0 7196 133 25 27 chr2 40387505 40387792 -210300062 - ERVL-B3 LTR ERVL -72 5692 5406 1810 167 4 0 chr2 40387792 40388073 -210299781 - AluJb SINE Alu -30 282 1 7196 133 25 27 chr2 40388073 40388962 -210298892 - ERVL-B3 LTR ERVL -358 5406 4519 273 137 118 0 chr2 40389005 40389056 -210298798 - MLT1G3 LTR MaLR -538 57 1 2887 120 3 111 chr2 40389131 40389655 -210298199 + L1MB2 LINE L1 5639 6095 -76 815 61 0 0 chr2 40389655 40389754 -210298100 + HY3 scRNA scRNA 1 99 -2 2887 120 3 111 chr2 40389754 40389814 -210298040 + L1MB2 LINE L1 6095 6160 -11 2107 146 3 0 chr2 40389816 40390118 -210297736 - AluSx SINE Alu -9 303 1 376 276 89 31 chr2 40390568 40390825 -210297029 + L1M4 LINE L1 4179 4450 -1696 2326 97 0 0 chr2 40391474 40391764 -210296090 + AluSg SINE Alu 1 290 -20 259 211 0 0 chr2 40391972 40392024 -210295830 - LTR16A LTR ERVL -8 442 391 2306 68 0 0 chr2 40392024 40392349 -210295505 + AluY SINE Alu 1 325 0 436 276 134 37 chr2 40392349 40392375 -210295479 - L1M4 LINE L1 -1082 5064 5042 2068 68 0 87 chr2 40392375 40392697 -210295157 - AluSc SINE Alu -15 294 1 436 276 134 37 chr2 40392697 40393133 -210294721 - L1M4 LINE L1 -1104 5042 4557 300 337 55 25 chr2 40393804 40393967 -210293887 - L2 LINE L2 -465 2849 2682 237 241 35 0 chr2 40394657 40394715 -210293139 - L3 LINE CR1 -5 1572 1513 438 279 153 60 chr2 40394817 40394925 -210292929 - L2 LINE L2 -1 3312 3215 2277 115 7 0 chr2 40394925 40395229 -210292625 + AluSx SINE Alu 1 306 -6 438 279 153 60 chr2 40395229 40395660 -210292194 - L2 LINE L2 -98 3215 2727 245 219 94 16 chr2 40395675 40395739 -210292115 - L3 LINE CR1 -265 1312 1244 1276 112 0 0 chr2 40395739 40395908 -210291946 + AluSg SINE Alu 1 169 -141 343 223 69 62 chr2 40396010 40396140 -210291714 + MIR SINE MIR 82 212 -50 2266 90 0 27 chr2 40396213 40396513 -210291341 + AluSx SINE Alu 1 292 -20 2284 118 0 0 chr2 40397852 40398157 -210289697 + AluSx SINE Alu 1 305 -7 831 175 36 72 chr2 40398405 40398628 -210289226 - L1ME2 LINE L1 -2 6162 5948 1450 126 51 12 chr2 40398628 40399060 -210288794 - LTR54 LTR ERV1 0 510 1 346 185 92 85 chr2 40399067 40399197 -210288657 - L1ME2 LINE L1 -220 5944 5814 4547 143 27 4 chr2 40399211 40399980 -210287874 - L1MB4 LINE L1 -6 6174 5388 2419 76 0 13 chr2 40400074 40400389 -210287465 - AluY SINE Alu 0 311 1 1576 106 208 0 chr2 40400391 40400636 -210287218 - AluSq SINE Alu -17 296 1 2359 89 0 7 chr2 40400756 40401060 -210286794 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 40401119 40401158 -210286696 + AT_rich Low_complexity Low_complexity 1 39 0 2563 199 50 4 chr2 40401367 40401884 -210285970 - MLT1F LTR MaLR 0 542 2 888 133 0 0 chr2 40402100 40402228 -210285626 + FLAM_C SINE Alu 5 132 -1 1552 155 65 47 chr2 40402652 40402961 -210284893 + AluJo SINE Alu 3 316 0 23 0 0 0 chr2 40403105 40403128 -210284726 + AT_rich Low_complexity Low_complexity 1 23 0 2217 104 7 7 chr2 40403476 40403774 -210284080 - AluSq SINE Alu -15 298 1 1058 98 0 0 chr2 40403788 40403921 -210283933 - AluSq/x SINE Alu -180 133 1 316 269 57 77 chr2 40404046 40404178 -210283676 + MLT1H LTR MaLR 18 151 -398 2189 106 0 7 chr2 40404178 40404471 -210283383 - AluSg SINE Alu -19 291 1 316 269 57 77 chr2 40404471 40404608 -210283246 + MLT1H LTR MaLR 151 330 -219 657 182 94 130 chr2 40404619 40404927 -210282927 + MLT1H1 LTR MaLR 259 555 0 221 245 19 0 chr2 40405006 40405059 -210282795 + GA-rich Low_complexity Low_complexity 1 54 0 243 88 0 0 chr2 40405213 40405247 -210282607 + (T)n Simple_repeat Simple_repeat 1 34 0 625 219 80 110 chr2 40405410 40405711 -210282143 + MLT1I LTR MaLR 101 392 -17 269 266 90 102 chr2 40405731 40405749 -210282105 + HAL1 LINE L1 1434 1451 -1056 1853 147 3 11 chr2 40405749 40406063 -210281791 + AluSx SINE Alu 1 312 0 269 266 90 102 chr2 40406063 40406222 -210281632 + HAL1 LINE L1 1451 1611 -896 562 242 8 0 chr2 40406222 40406354 -210281500 + FLAM_A SINE Alu 1 133 0 269 266 90 102 chr2 40406354 40406430 -210281424 + HAL1 LINE L1 1611 1686 -821 604 283 39 5 chr2 40406546 40406751 -210281103 + L1ME LINE L1 5533 5744 -377 968 106 0 0 chr2 40406755 40406887 -210280967 + FLAM_C SINE Alu 1 132 -1 283 60 40 20 chr2 40406892 40406942 -210280912 + (GAAA)n Simple_repeat Simple_repeat 4 54 0 751 156 0 0 chr2 40407190 40407312 -210280542 - AluSg/x SINE Alu -1 308 187 334 293 80 64 chr2 40407315 40407374 -210280480 - L1MC4a LINE L1 -1875 5933 5876 2017 166 3 0 chr2 40407374 40407670 -210280184 - AluJb SINE Alu -15 297 1 334 293 80 64 chr2 40407670 40407798 -210280056 - L1MC4a LINE L1 -1932 5876 5743 2037 109 4 13 chr2 40408083 40408398 -210279456 + AluSx SINE Alu 1 281 -31 726 133 142 8 chr2 40408668 40408788 -210279066 + AluJo SINE Alu 1 136 -176 1942 104 17 10 chr2 40408788 40409087 -210278767 + AluSc SINE Alu 1 301 -8 351 263 170 0 chr2 40409227 40409398 -210278456 + MIR SINE MIR 63 262 0 1969 131 7 27 chr2 40410177 40410503 -210277351 + AluSx SINE Alu 1 320 0 2409 84 3 7 chr2 40410678 40410988 -210276866 + AluSc SINE Alu 1 309 0 1260 175 0 10 chr2 40411099 40411305 -210276549 - AluJb SINE Alu -24 288 85 514 224 35 17 chr2 40411306 40411422 -210276432 - MIR SINE MIR -100 162 45 358 327 6 42 chr2 40411706 40411880 -210275974 + MIR SINE MIR 42 206 -56 1391 204 25 28 chr2 40411997 40412316 -210275538 + MER58B DNA MER1_type 24 341 0 33 0 0 0 chr2 40412610 40412643 -210275211 + AT_rich Low_complexity Low_complexity 1 33 0 1693 200 59 41 chr2 40413230 40413514 -210274340 + MLT1C LTR MaLR 1 298 -169 1889 165 17 0 chr2 40413514 40413811 -210274043 + AluSx SINE Alu 1 302 -10 1693 200 59 41 chr2 40413811 40413985 -210273869 + MLT1C LTR MaLR 298 467 0 396 271 45 7 chr2 40414597 40414752 -210273102 - L1ME4a LINE L1 -4 6117 5957 1151 151 9 57 chr2 40414771 40414983 -210272871 - AluJo SINE Alu -23 289 88 304 273 67 7 chr2 40414999 40415149 -210272705 - L1ME4a LINE L1 -205 5916 5758 1928 163 0 7 chr2 40415241 40415547 -210272307 + AluJb SINE Alu 1 304 -8 782 150 8 23 chr2 40415550 40415683 -210272171 + FLAM_C SINE Alu 2 132 -1 2133 105 3 0 chr2 40415754 40416072 -210271782 - AluSp SINE Alu 0 319 1 372 231 117 30 chr2 40416082 40416408 -210271446 - L1ME4a LINE L1 -11 6110 5695 1593 154 20 72 chr2 40416573 40416879 -210270975 + AluJb SINE Alu 1 290 -22 369 217 141 49 chr2 40416905 40417089 -210270765 - L1ME4a LINE L1 -2340 5468 5268 4365 144 26 12 chr2 40417198 40418008 -210269846 - L1MB4 LINE L1 -7 6173 5353 974 169 0 6 chr2 40418039 40418205 -210269649 - AluSg/x SINE Alu -11 301 137 1176 141 0 0 chr2 40418250 40418448 -210269406 + L1PB1 LINE L1 1 198 -6665 * 14194 169 57 26 chr2 40418444 40419010 -210268844 + L1PB1 LINE L1 995 1542 -5325 2191 116 3 0 chr2 40419010 40419304 -210268550 - AluSx SINE Alu -17 295 1 14194 169 57 26 chr2 40419304 40424347 -210263507 + L1PB1 LINE L1 1542 6428 -439 1870 151 0 0 chr2 40424347 40424625 -210263229 + AluSx SINE Alu 1 278 -34 14194 169 57 26 chr2 40424625 40424636 -210263218 + L1PB1 LINE L1 6428 6437 -430 459 0 0 0 chr2 40424636 40424687 -210263167 + (CAAAA)n Simple_repeat Simple_repeat 3 53 0 14194 169 57 26 chr2 40424687 40424747 -210263107 + L1PB1 LINE L1 6437 6867 0 1632 194 62 2 chr2 40424754 40425155 -210262699 - L1MB4 LINE L1 -797 5349 4925 317 261 58 7 chr2 40425978 40426116 -210261738 - L1ME4a LINE L1 -199 5922 5778 34 72 0 0 chr2 40427196 40427265 -210260589 + AT_rich Low_complexity Low_complexity 1 69 0 1687 184 16 7 chr2 40427299 40427603 -210260251 + AluJo SINE Alu 1 307 -5 307 222 0 0 chr2 40427819 40427882 -210259972 + MER94 DNA DNA 1 63 -71 2420 68 3 0 chr2 40427882 40428191 -210259663 + AluY SINE Alu 1 310 -1 369 200 119 10 chr2 40428336 40428481 -210259373 + L1MC4 LINE L1 7085 7240 -721 421 226 48 0 chr2 40428607 40428731 -210259123 + L1MC5 LINE L1 7261 7390 -571 1050 163 0 6 chr2 40428769 40428941 -210258913 + MER5A DNA MER1_type 17 187 -2 2565 54 0 0 chr2 40428961 40429259 -210258595 - AluY SINE Alu -13 298 1 1840 156 3 7 chr2 40429398 40429687 -210258167 - AluSx SINE Alu -24 288 1 698 146 9 0 chr2 40429886 40429996 -210257858 - FLAM_C SINE Alu -18 125 15 181 164 66 0 chr2 40430447 40430508 -210257346 + A-rich Low_complexity Low_complexity 5 69 0 2043 128 0 17 chr2 40430616 40430949 -210256905 - AluSx SINE Alu 0 328 1 305 256 102 34 chr2 40431160 40431336 -210256518 - L1ME4a LINE L1 -2014 5794 5607 522 245 53 50 chr2 40431781 40432083 -210255771 - L1ME4a LINE L1 -575 5587 5285 23 0 0 0 chr2 40432250 40432273 -210255581 + AT_rich Low_complexity Low_complexity 1 23 0 493 218 92 28 chr2 40432749 40432891 -210254963 + MIR SINE MIR 1 151 -111 398 283 254 31 chr2 40433013 40433363 -210254491 - L2 LINE L2 -337 2977 2550 301 213 0 0 chr2 40433960 40434021 -210253833 - MADE1 DNA Mariner 0 80 20 366 329 33 13 chr2 40434268 40434420 -210253434 + L2 LINE L2 2763 2917 -397 2274 95 3 0 chr2 40434420 40434759 -210253095 - AluSp SINE Alu 0 340 1 204 158 0 0 chr2 40434800 40434838 -210253016 + T-rich Low_complexity Low_complexity 4 41 0 2699 151 34 55 chr2 40434874 40434946 -210252908 + MLT2B2 LTR ERVL 2 74 -441 1492 196 28 10 chr2 40434946 40435237 -210252617 + AluJo SINE Alu 2 297 -15 2699 151 34 55 chr2 40435237 40435689 -210252165 + MLT2B2 LTR ERVL 74 515 0 409 306 41 0 chr2 40435767 40435865 -210251989 + L2 LINE L2 3148 3249 -23 263 288 135 0 chr2 40435867 40435978 -210251876 + LTR67 LTR ERVL 432 557 0 1898 149 3 3 chr2 40436127 40436446 -210251408 - AluSx SINE Alu 0 319 1 377 317 56 29 chr2 40437005 40437311 -210250543 + ERVL LTR ERVL 818 1131 -4633 2309 87 10 7 chr2 40437312 40437612 -210250242 - AluSx SINE Alu -11 301 1 2283 89 0 10 chr2 40437702 40438040 -210249814 - AluY SINE Alu 0 335 1 236 283 38 28 chr2 40438160 40438266 -210249588 - HAL1 LINE L1 -2399 108 2 342 309 197 55 chr2 40438465 40438795 -210249059 + L2 LINE L2 2896 3272 0 182 273 61 40 chr2 40438794 40438893 -210248961 - L2 LINE L2 -52 3261 3161 * 1926 142 0 0 chr2 40439033 40439341 -210248513 + AluSx SINE Alu 1 308 0 22 0 0 0 chr2 40439564 40439586 -210248268 + AT_rich Low_complexity Low_complexity 1 22 0 31 44 0 0 chr2 40439671 40439716 -210248138 + AT_rich Low_complexity Low_complexity 1 45 0 789 271 50 34 chr2 40439794 40440312 -210247542 - L1ME4a LINE L1 -237 5884 5351 1669 154 56 0 chr2 40440356 40440623 -210247231 - AluJb SINE Alu -30 282 1 22 35 0 0 chr2 40440752 40440781 -210247073 + AT_rich Low_complexity Low_complexity 1 29 0 423 304 87 33 chr2 40440992 40441224 -210246630 - L1ME4a LINE L1 -1525 4621 4403 1886 144 48 0 chr2 40441224 40441516 -210246338 - AluSx SINE Alu -6 306 1 423 304 87 33 chr2 40441516 40441859 -210245995 - L1ME4a LINE L1 -1743 4403 4015 2093 79 0 22 chr2 40441876 40442143 -210245711 + AluSg1 SINE Alu 31 291 -18 336 40 80 0 chr2 40443144 40443219 -210244635 + (TA)n Simple_repeat Simple_repeat 1 81 0 287 224 0 0 chr2 40443403 40443461 -210244393 + MER94 DNA DNA 75 132 -2 288 248 43 99 chr2 40443471 40443509 -210244345 + MER94 DNA DNA 1 40 -94 1691 135 30 63 chr2 40443509 40443812 -210244042 - AluSx SINE Alu -19 293 1 288 248 43 99 chr2 40443812 40443914 -210243940 + MER94 DNA DNA 40 133 -1 524 188 0 0 chr2 40444215 40444311 -210243543 + FLAM_A SINE Alu 43 138 -4 190 260 73 42 chr2 40444537 40444633 -210243221 - MIR SINE MIR -99 163 65 475 247 187 0 chr2 40445283 40445433 -210242421 + MER5A DNA MER1_type 12 189 0 244 299 11 11 chr2 40445433 40445520 -210242334 + MIR3 SINE MIR 112 198 -10 1714 120 139 0 chr2 40446824 40447083 -210240771 + AluSp SINE Alu 1 295 -18 279 211 70 0 chr2 40447486 40447557 -210240297 - MIR SINE MIR -83 179 104 2191 100 0 7 chr2 40447654 40447943 -210239911 + AluSx SINE Alu 1 287 -25 243 0 0 0 chr2 40447946 40447973 -210239881 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 878 218 0 0 chr2 40448497 40448653 -210239201 + FRAM SINE Alu 1 156 -10 254 353 35 17 chr2 40449128 40449244 -210238610 + L2 LINE L2 2259 2376 -938 2458 90 0 0 chr2 40449490 40449801 -210238053 + AluY SINE Alu 1 311 0 21 57 0 0 chr2 40450589 40450624 -210237230 + AT_rich Low_complexity Low_complexity 1 35 0 2212 91 7 7 chr2 40450639 40450937 -210236917 - AluSc SINE Alu -11 298 1 629 284 112 47 chr2 40451138 40451616 -210236238 + HAL1b LINE L1 58 598 -750 1504 193 56 14 chr2 40451616 40451901 -210235953 - AluJo SINE Alu -15 297 1 629 284 112 47 chr2 40451901 40452129 -210235725 + HAL1b LINE L1 598 810 -538 1381 192 4 31 chr2 40452224 40452479 -210235375 + AluJo SINE Alu 39 286 -26 846 244 23 9 chr2 40452871 40453092 -210234762 - MER58A DNA MER1_type 0 224 1 2118 167 103 11 chr2 40455104 40455570 -210232284 - LTR22 LTR ERVK 0 509 1 203 290 131 70 chr2 40456343 40456557 -210231297 + MIR SINE MIR 10 236 -26 2157 85 0 20 chr2 40457209 40457503 -210230351 - AluSc SINE Alu -21 288 1 535 305 150 9 chr2 40457515 40457728 -210230126 - MIR SINE MIR -18 244 2 839 181 0 0 chr2 40458817 40458950 -210228904 - AluSq/x SINE Alu -179 133 1 483 293 52 14 chr2 40459243 40459397 -210228457 - L1ME LINE L1 -398 6579 6422 551 279 144 15 chr2 40459412 40459753 -210228101 - L1ME LINE L1 -1117 5840 5456 875 135 0 0 chr2 40459770 40459896 -210227958 - FLAM_C SINE Alu -17 126 1 789 299 151 18 chr2 40459897 40460867 -210226987 - L1ME LINE L1 -1488 5469 4368 572 197 21 0 chr2 40461590 40461732 -210226122 + AluSg1 SINE Alu 1 145 -164 1699 184 17 14 chr2 40462424 40462717 -210225137 + AluJo SINE Alu 1 294 -18 1914 191 68 49 chr2 40463398 40463910 -210223944 - L1MC4 LINE L1 -89 7953 7432 1084 169 40 122 chr2 40463917 40464271 -210223583 - L1MB5 LINE L1 -226 5948 5624 1309 115 92 5 chr2 40464282 40464443 -210223411 - AluSx SINE Alu -12 300 114 261 0 0 0 chr2 40464443 40464472 -210223382 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 1309 115 92 5 chr2 40464472 40464528 -210223326 - AluSx SINE Alu -198 114 64 597 230 133 12 chr2 40464629 40464959 -210222895 - L1ME LINE L1 -2612 4345 3976 * 1843 245 44 21 chr2 40464953 40465679 -210222175 - L1ME LINE L1 -4833 2022 1372 287 136 34 17 chr2 40465715 40465774 -210222080 - L1ME LINE L1 -5467 1392 1333 21 0 0 0 chr2 40466286 40466307 -210221547 + AT_rich Low_complexity Low_complexity 1 21 0 2090 81 7 17 chr2 40466326 40466624 -210221230 - AluSq SINE Alu -18 295 1 1626 189 174 21 chr2 40466688 40467112 -210220742 + MLT1F LTR MaLR 1 489 -53 337 291 108 7 chr2 40467120 40467268 -210220586 + L1MEc LINE L1 1655 1817 -4579 284 232 43 0 chr2 40467339 40467408 -210220446 + MLT1F LTR MaLR 496 567 0 1748 140 9 55 chr2 40467796 40468124 -210219730 - AluSq SINE Alu 0 313 1 1810 167 6 13 chr2 40468594 40468906 -210218948 + AluJb SINE Alu 2 311 -1 722 120 30 135 chr2 40469805 40469954 -210217900 - AluSc SINE Alu -49 260 136 2042 102 3 7 chr2 40469954 40470239 -210217615 - AluY SINE Alu -27 284 1 722 120 30 135 chr2 40470239 40470289 -210217565 - AluSc SINE Alu -173 136 82 761 290 80 5 chr2 40470387 40470611 -210217243 + MIR SINE MIR 12 252 -10 366 156 0 0 chr2 40470611 40470675 -210217179 + (CTG)n Simple_repeat Simple_repeat 2 65 0 21 0 0 0 chr2 40470952 40470973 -210216881 + AT_rich Low_complexity Low_complexity 1 21 0 211 226 113 57 chr2 40471142 40471248 -210216606 - MIR3 SINE MIR -6 202 91 1224 199 120 10 chr2 40471756 40472057 -210215797 + L1ME3A LINE L1 3862 4195 -1951 689 202 0 8 chr2 40472057 40472181 -210215673 + FLAM_C SINE Alu 1 123 -20 2462 196 39 92 chr2 40472233 40472632 -210215222 + L1ME3A LINE L1 4181 4600 -1546 1691 176 3 10 chr2 40472632 40472922 -210214932 + AluJo SINE Alu 1 288 -24 2462 196 39 92 chr2 40472922 40473226 -210214628 + L1ME3A LINE L1 4600 4830 -1316 2232 133 0 0 chr2 40473226 40473535 -210214319 - AluSx SINE Alu -3 309 1 2462 196 39 92 chr2 40473535 40473714 -210214140 + L1ME3A LINE L1 4830 5017 -1129 232 148 7 67 chr2 40473826 40473975 -210213879 + G-rich Low_complexity Low_complexity 4 143 0 23 33 0 0 chr2 40474467 40474497 -210213357 + AT_rich Low_complexity Low_complexity 1 30 0 1720 173 0 7 chr2 40474799 40475083 -210212771 - AluJo SINE Alu -30 282 1 416 282 138 6 chr2 40475640 40475821 -210212033 - MIR3 SINE MIR -1 207 3 24 32 0 0 chr2 40475981 40476012 -210211842 + AT_rich Low_complexity Low_complexity 1 31 0 651 255 89 31 chr2 40476049 40476526 -210211328 + L1ME3A LINE L1 5377 5950 -220 348 298 48 24 chr2 40476679 40476847 -210211007 - L1M4 LINE L1 -1695 4451 4280 230 344 97 11 chr2 40477351 40477444 -210210410 + L2 LINE L2 3163 3263 -9 2019 99 42 7 chr2 40477490 40477773 -210210081 + AluSg1 SINE Alu 1 293 -16 2570 26 0 23 chr2 40477940 40478246 -210209608 - AluY SINE Alu -12 299 1 28 61 0 0 chr2 40479377 40479426 -210208428 + AT_rich Low_complexity Low_complexity 1 49 0 206 104 21 42 chr2 40480042 40480090 -210207764 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 2085 110 0 29 chr2 40482057 40482366 -210205488 + AluSg SINE Alu 1 300 -10 2009 138 3 0 chr2 40482991 40483288 -210204566 - AluSx SINE Alu -14 298 1 1902 114 0 4 chr2 40483295 40483559 -210204295 - AluSx SINE Alu 0 312 50 24 0 0 0 chr2 40483582 40483606 -210204248 + AT_rich Low_complexity Low_complexity 1 24 0 601 111 37 56 chr2 40483612 40483720 -210204134 - AluJb SINE Alu -195 117 12 28 0 0 0 chr2 40483921 40483949 -210203905 + AT_rich Low_complexity Low_complexity 1 28 0 221 224 237 0 chr2 40484022 40484098 -210203756 - MIR SINE MIR -12 250 157 1024 134 0 0 chr2 40484138 40484287 -210203567 - AluSg/x SINE Alu -8 302 154 395 299 134 0 chr2 40485151 40485308 -210202546 - MIR SINE MIR -13 249 72 285 368 0 21 chr2 40485712 40485807 -210202047 - MIR SINE MIR -149 113 21 1773 164 0 18 chr2 40486276 40486562 -210201292 - AluJo SINE Alu -29 283 3 21 57 0 0 chr2 40487729 40487764 -210200090 + AT_rich Low_complexity Low_complexity 1 35 0 983 188 21 5 chr2 40487900 40488086 -210199768 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr2 40488330 40488351 -210199503 + AT_rich Low_complexity Low_complexity 1 21 0 2474 64 0 13 chr2 40488874 40489187 -210198667 - AluY SINE Alu -2 309 1 573 267 160 11 chr2 40489332 40489519 -210198335 + MIR SINE MIR 44 258 -4 1675 174 20 3 chr2 40489872 40490171 -210197683 + AluJb SINE Alu 1 304 -8 2194 118 3 0 chr2 40490533 40490839 -210197015 - AluSx SINE Alu -5 307 1 268 318 78 36 chr2 40490884 40491076 -210196778 + L2 LINE L2 2325 2524 -790 959 286 20 8 chr2 40491137 40491392 -210196462 + MIR SINE MIR 3 260 -2 294 322 23 0 chr2 40491415 40491502 -210196352 - MER20B DNA MER1_type -642 141 53 1041 161 16 10 chr2 40491502 40491694 -210196160 + L1MB8 LINE L1 5980 6172 -6 305 289 166 86 chr2 40491869 40492218 -210195636 + L2 LINE L2 2844 3220 -52 2216 109 0 3 chr2 40492239 40492532 -210195322 - AluSq SINE Alu -20 293 2 576 125 240 0 chr2 40492563 40492667 -210195187 + AluSg SINE Alu 5 133 -177 1974 113 36 0 chr2 40492667 40492976 -210194878 + AluSq SINE Alu 1 319 0 21 57 0 0 chr2 40493034 40493069 -210194785 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 40493187 40493208 -210194646 + AT_rich Low_complexity Low_complexity 1 21 0 473 164 58 10 chr2 40493729 40493833 -210194021 - MER50 LTR ERV1 -135 599 491 184 358 114 32 chr2 40493957 40494080 -210193774 + MIR SINE MIR 16 148 -114 1524 190 13 20 chr2 40494341 40494641 -210193213 + AluJo SINE Alu 6 303 -9 23 0 0 0 chr2 40494803 40494826 -210193028 + AT_rich Low_complexity Low_complexity 1 23 0 53 49 0 0 chr2 40496434 40496515 -210191339 + AT_rich Low_complexity Low_complexity 1 81 0 2062 125 7 10 chr2 40496579 40496883 -210190971 + AluSx SINE Alu 1 303 -9 1150 155 0 0 chr2 40496886 40497047 -210190807 + AluSx SINE Alu 4 164 -148 438 266 131 54 chr2 40497610 40498313 -210189541 - L1ME3A LINE L1 -318 5852 5131 21 71 0 0 chr2 40498749 40498791 -210189063 + AT_rich Low_complexity Low_complexity 1 42 0 1998 142 10 0 chr2 40498819 40499128 -210188726 - AluSx SINE Alu 0 312 1 24 0 0 51 chr2 40499208 40499231 -210188623 + AT_rich Low_complexity Low_complexity 1 24 -13 2227 100 0 0 chr2 40499231 40499546 -210188308 + AluSg SINE Alu 1 315 0 24 0 0 51 chr2 40499546 40499560 -210188294 + AT_rich Low_complexity Low_complexity 24 37 0 1608 181 4 7 chr2 40499567 40499843 -210188011 - AluJo SINE Alu -21 291 17 2157 122 9 32 chr2 40500734 40501079 -210186775 - MER1B DNA MER1_type 0 337 1 2158 102 3 33 chr2 40501966 40502270 -210185584 - AluSq SINE Alu -18 295 1 2326 64 0 0 chr2 40503438 40503746 -210184108 + AluY SINE Alu 1 308 0 24 85 0 0 chr2 40504226 40504285 -210183569 + AT_rich Low_complexity Low_complexity 1 59 0 2126 114 7 7 chr2 40504470 40504778 -210183076 + AluSx SINE Alu 1 308 -4 2450 105 18 52 chr2 40505184 40505456 -210182398 + L1MA5A LINE L1 5853 6104 -193 1917 97 60 43 chr2 40505456 40505755 -210182099 + AluY SINE Alu 1 304 -7 2450 105 18 52 chr2 40505755 40505940 -210181914 + L1MA5A LINE L1 6104 6294 -3 1590 153 41 17 chr2 40506271 40506565 -210181289 + AluJb SINE Alu 1 301 -11 220 235 0 20 chr2 40506592 40506643 -210181211 - MIR SINE MIR -127 135 86 1378 204 80 47 chr2 40506920 40507282 -210180572 + MLT1B LTR MaLR 5 378 -12 881 148 39 13 chr2 40507645 40507800 -210180054 + FRAM SINE Alu 2 160 -6 541 363 18 18 chr2 40509193 40509433 -210178421 + MIR SINE MIR 15 252 -10 1433 194 46 28 chr2 40509472 40509797 -210178057 + Charlie1b DNA MER1_type 2 332 -191 751 177 83 0 chr2 40509975 40510167 -210177687 + Charlie1b DNA MER1_type 316 523 0 2028 123 7 26 chr2 40510383 40510691 -210177163 - AluSx SINE Alu -10 302 1 385 259 176 0 chr2 40511470 40511640 -210176214 - MIR SINE MIR 0 262 63 2342 92 0 0 chr2 40511780 40512085 -210175769 - AluSq SINE Alu -8 305 1 1957 117 10 10 chr2 40513350 40513650 -210174204 + AluSq SINE Alu 2 301 -12 216 338 14 0 chr2 40513851 40513922 -210173932 + L2 LINE L2 3185 3256 -16 25 0 0 0 chr2 40514332 40514357 -210173497 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr2 40514526 40514558 -210173296 + AT_rich Low_complexity Low_complexity 1 32 0 196 292 82 124 chr2 40515368 40515635 -210172219 + L2 LINE L2 3008 3263 -9 2388 67 0 13 chr2 40516409 40516722 -210171132 + AluSc SINE Alu 1 309 0 2036 126 7 10 chr2 40518200 40518502 -210169352 - AluSx SINE Alu -9 303 3 3845 147 38 35 chr2 40519171 40519908 -210167946 + L1MB3 LINE L1 5445 6183 0 513 299 242 5 chr2 40520007 40520218 -210167636 + MIR SINE MIR 2 262 0 2329 84 3 3 chr2 40520498 40520795 -210167059 - AluSc SINE Alu -12 297 1 276 203 49 32 chr2 40522141 40522264 -210165590 + (TATATG)n Simple_repeat Simple_repeat 4 128 0 29 0 0 0 chr2 40523617 40523646 -210164208 + AT_rich Low_complexity Low_complexity 1 29 0 1134 190 4 18 chr2 40523791 40524017 -210163837 - AluJo SINE Alu -12 300 78 2381 74 0 3 chr2 40524216 40524525 -210163329 - AluY SINE Alu -3 308 1 5193 124 37 37 chr2 40524659 40525581 -210162273 - L1MA4 LINE L1 -20 6280 5359 2177 106 0 3 chr2 40525743 40526046 -210161808 - AluSx SINE Alu -10 302 1 1612 189 174 21 chr2 40526101 40526525 -210161329 + MLT1F LTR MaLR 1 489 -53 339 291 108 7 chr2 40526533 40526681 -210161173 + L1MEc LINE L1 1655 1817 -4579 296 221 59 0 chr2 40526752 40526820 -210161034 + MLT1F LTR MaLR 496 567 0 196 358 49 12 chr2 40527549 40527630 -210160224 + L2 LINE L2 3103 3186 -86 1342 121 14 14 chr2 40527879 40528102 -210159752 - L1PA13 LINE L1 0 6163 5941 438 130 11 22 chr2 40528111 40528203 -210159651 + CT-rich Low_complexity Low_complexity 1 91 0 1729 138 0 8 chr2 40528213 40528481 -210159373 - AluSx SINE Alu -46 266 1 1827 164 3 0 chr2 40528705 40528997 -210158857 - AluSx SINE Alu -19 293 1 275 305 54 36 chr2 40529398 40529565 -210158289 - MER5A DNA MER1_type -1 188 19 289 311 67 30 chr2 40529411 40529546 -210158308 + MER5B DNA MER1_type 15 154 -24 366 221 267 15 chr2 40529570 40529701 -210158153 + MER5A DNA MER1_type 7 170 -19 21 0 0 0 chr2 40530182 40530203 -210157651 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 40530522 40530566 -210157288 + AT_rich Low_complexity Low_complexity 1 44 0 24 0 0 0 chr2 40530714 40530738 -210157116 + AT_rich Low_complexity Low_complexity 1 24 0 5325 110 46 16 chr2 40531567 40533077 -210154777 + L1PA15 LINE L1 4628 6165 0 1183 167 5 18 chr2 40533588 40533809 -210154045 + MER20 DNA MER1_type 1 218 -1 942 191 176 10 chr2 40534017 40534221 -210153633 - MER8 DNA MER2_type 0 239 2 190 286 0 0 chr2 40534699 40534748 -210153106 + L2 LINE L2 3024 3072 -241 841 56 112 0 chr2 40535011 40535136 -210152718 + MER85 DNA T2_type 1 139 0 291 290 131 9 chr2 40535760 40535825 -210152029 - MIR SINE MIR -50 212 156 7968 57 4 5 chr2 40535825 40536795 -210151059 + LTR5 LTR ERVK 1 969 0 291 290 131 9 chr2 40536795 40536886 -210150968 - MIR SINE MIR -106 156 40 237 132 0 0 chr2 40537255 40537293 -210150561 + (TG)n Simple_repeat Simple_repeat 2 39 0 222 128 0 0 chr2 40537284 40537323 -210150531 + (TA)n Simple_repeat Simple_repeat 2 40 0 * 2232 123 0 0 chr2 40537325 40537633 -210150221 - AluSx SINE Alu 0 312 5 1124 167 35 0 chr2 40538114 40538312 -210149542 + Tigger6 DNA MER2_type 2 206 -877 1589 137 72 75 chr2 40538323 40538710 -210149144 + Tigger6 DNA MER2_type 1212 1597 0 2199 114 7 0 chr2 40538795 40539102 -210148752 + AluSg SINE Alu 1 309 -1 769 142 0 39 chr2 40539652 40539779 -210148075 - FLAM_C SINE Alu -16 127 6 222 150 0 0 chr2 40540111 40540151 -210147703 + (CATA)n Simple_repeat Simple_repeat 4 43 0 1128 89 5 47 chr2 40541136 40541326 -210146528 + THE1C-int LTR MaLR 1399 1580 0 1484 148 81 32 chr2 40541326 40541636 -210146218 + THE1C LTR MaLR 1 325 -50 181 271 86 43 chr2 40541844 40541914 -210145940 + L2 LINE L2 1841 1913 -1401 2037 145 0 0 chr2 40542716 40543026 -210144828 + AluJb SINE Alu 1 310 -2 705 227 63 47 chr2 40543133 40543397 -210144457 + L1ME1 LINE L1 5893 6155 -9 517 336 139 46 chr2 40544069 40544501 -210143353 + HAL1 LINE L1 163 634 -1873 280 330 10 0 chr2 40544506 40544609 -210143245 + HAL1 LINE L1 780 883 -1624 1232 253 194 30 chr2 40544670 40545310 -210142544 + HAL1 LINE L1 1178 1922 -585 220 335 96 54 chr2 40546042 40546209 -210141645 - L2 LINE L2 -424 2890 2717 24 32 0 0 chr2 40548299 40548330 -210139524 + AT_rich Low_complexity Low_complexity 1 31 0 351 0 0 0 chr2 40548629 40548668 -210139186 + (TG)n Simple_repeat Simple_repeat 2 40 0 879 317 105 29 chr2 40549390 40550068 -210137786 - L2 LINE L2 -25 3288 2557 2266 103 3 3 chr2 40550857 40551169 -210136685 + AluSx SINE Alu 1 312 0 468 116 0 0 chr2 40551369 40551438 -210136416 + L1MB7 LINE L1 6108 6176 -8 1970 148 10 10 chr2 40552420 40552730 -210135124 - AluJo SINE Alu -2 310 1 468 225 0 0 chr2 40552750 40552839 -210135015 + L2 LINE L2 3225 3313 0 1446 182 70 52 chr2 40553326 40553656 -210134198 + MLT1A1 LTR MaLR 22 357 -8 616 315 97 17 chr2 40553981 40554330 -210133524 + L1MEd LINE L1 3 379 -5740 396 242 55 0 chr2 40554490 40554618 -210133236 + L1MEd LINE L1 602 736 -5383 524 274 135 17 chr2 40555396 40555758 -210132096 + L1MEd LINE L1 851 1255 -4864 459 276 29 38 chr2 40555784 40555994 -210131860 + HAL1 LINE L1 1417 1624 -883 2251 96 3 0 chr2 40556044 40556337 -210131517 + AluSg SINE Alu 1 294 -16 1892 131 33 0 chr2 40556776 40557097 -210130757 - AluSx SINE Alu 0 330 1 200 329 49 12 chr2 40557614 40557696 -210130158 + L2 LINE L2 3227 3311 -2 297 337 0 11 chr2 40558810 40558902 -210128952 + L2 LINE L2 3180 3270 -2 1397 186 14 101 chr2 40558931 40559297 -210128557 + MER58B DNA MER1_type 3 336 -5 194 375 142 21 chr2 40559344 40559584 -210128270 - L2 LINE L2 -173 3099 2831 244 329 47 0 chr2 40559614 40559699 -210128155 - L3 LINE CR1 -406 1171 1083 1186 173 6 138 chr2 40559759 40560100 -210127754 + AluJo SINE Alu 2 297 -5 2542 61 0 10 chr2 40560305 40560616 -210127238 + AluY SINE Alu 1 308 -3 257 153 68 0 chr2 40560706 40560765 -210127089 + Charlie1 DNA MER1_type 2625 2687 -74 550 323 57 30 chr2 40560824 40561087 -210126767 - L3 LINE CR1 -510 1067 798 1153 187 29 29 chr2 40561642 40561883 -210125971 + Charlie1 DNA MER1_type 2 242 -2519 736 118 0 56 chr2 40561866 40562010 -210125844 + Charlie1 DNA MER1_type 2622 2757 -4 * 206 225 127 0 chr2 40562149 40562220 -210125634 + MIR SINE MIR 180 259 -3 216 213 0 62 chr2 40562264 40562344 -210125510 + (CTTAA)n Simple_repeat Simple_repeat 1 75 0 27 29 0 0 chr2 40562388 40562422 -210125432 + AT_rich Low_complexity Low_complexity 1 34 0 326 346 90 48 chr2 40562425 40562613 -210125241 - L3 LINE CR1 -1197 380 185 21 0 0 0 chr2 40563591 40563612 -210124242 + AT_rich Low_complexity Low_complexity 1 21 0 311 263 74 11 chr2 40564180 40564275 -210123579 - MER103 DNA DNA -6 160 60 371 371 6 6 chr2 40564288 40564455 -210123399 + GA-rich Low_complexity Low_complexity 2 168 0 1058 201 23 27 chr2 40564632 40564851 -210123003 + MER20 DNA MER1_type 2 219 0 886 144 40 45 chr2 40564909 40565131 -210122723 + L1MD3 LINE L1 7765 7985 -10 228 276 31 87 chr2 40565308 40565435 -210122419 + L2 LINE L2 2586 2705 -609 917 158 120 5 chr2 40565661 40565845 -210122009 - MER2 DNA MER2_type -139 206 2 230 286 63 40 chr2 40566054 40566180 -210121674 + L2 LINE L2 3093 3221 -92 2106 122 0 7 chr2 40566350 40566638 -210121216 - AluSx SINE Alu -26 286 1 1720 119 4 4 chr2 40566722 40566974 -210120880 + AluSg SINE Alu 45 296 -14 305 311 72 44 chr2 40567745 40567925 -210119929 + MIR3 SINE MIR 18 202 -6 21 0 0 0 chr2 40568094 40568115 -210119739 + AT_rich Low_complexity Low_complexity 1 21 0 366 156 0 0 chr2 40568392 40568456 -210119398 + (CAG)n Simple_repeat Simple_repeat 2 65 0 788 291 81 0 chr2 40568456 40568679 -210119175 - MIR SINE MIR -10 252 12 1303 105 0 28 chr2 40568777 40568829 -210119025 + AluSc SINE Alu 82 134 -175 2266 74 3 3 chr2 40568829 40569135 -210118719 + AluY SINE Alu 1 306 0 1303 105 0 28 chr2 40569135 40569262 -210118592 + AluSc SINE Alu 134 257 -52 499 106 0 0 chr2 40569262 40569360 -210118494 + AluSg/x SINE Alu 216 313 0 1662 154 57 34 chr2 40569630 40569750 -210118104 + AluJb SINE Alu 1 117 -195 2033 116 10 3 chr2 40569750 40570051 -210117803 + AluSc SINE Alu 1 303 -6 1662 154 57 34 chr2 40570051 40570228 -210117626 + AluJb SINE Alu 117 305 -7 1108 203 48 12 chr2 40571193 40571444 -210116410 + MIR SINE MIR 3 262 0 301 249 11 34 chr2 40572751 40572875 -210114979 + MLT1L LTR MaLR 474 609 0 190 314 231 0 chr2 40572914 40573035 -210114819 + L2 LINE L2 3165 3313 0 883 101 14 22 chr2 40573464 40573602 -210114252 - THE1C LTR MaLR -238 137 1 10257 94 31 61 chr2 40573602 40575231 -210112623 - THE1C-int LTR MaLR 0 1580 1 2390 116 22 11 chr2 40575231 40575602 -210112252 - THE1C LTR MaLR 0 375 1 347 336 30 38 chr2 40575700 40575831 -210112023 + MIR SINE MIR 7 136 -126 56 61 0 0 chr2 40576323 40576421 -210111433 + AT_rich Low_complexity Low_complexity 1 98 0 4323 190 68 28 chr2 40576916 40578053 -210109801 + L1MB1 LINE L1 4150 5331 -815 2123 135 0 3 chr2 40578053 40578357 -210109497 + AluSx SINE Alu 1 303 -9 430 209 59 40 chr2 40578362 40578498 -210109356 + L1MA9 LINE L1 6178 6307 -5 1921 141 38 35 chr2 40578513 40578882 -210108972 + L1MB1 LINE L1 5324 5693 -475 839 226 20 0 chr2 40578882 40579080 -210108774 + L1MB1 LINE L1 5958 6160 -8 1059 123 82 6 chr2 40579082 40579253 -210108601 - MER4E LTR ERV1 -2 777 594 2134 124 7 0 chr2 40579253 40579552 -210108302 + AluSx SINE Alu 1 301 -11 3150 123 54 20 chr2 40579552 40580088 -210107766 - MER4D LTR ERV1 -348 555 2 2917 3 0 0 chr2 40580098 40580411 -210107443 - AluYb8 SINE Alu -5 313 1 2729 115 36 83 chr2 40580705 40581354 -210106500 - MER4B LTR ERV1 0 779 1 1679 203 7 0 chr2 40581927 40582237 -210105617 + AluJb SINE Alu 1 312 0 439 212 177 0 chr2 40582292 40582405 -210105449 + FLAM_A SINE Alu 1 133 0 423 105 76 114 chr2 40582437 40582542 -210105312 - MER106B DNA MER1_type -57 1002 902 1885 157 3 10 chr2 40583052 40583358 -210104496 + AluJo SINE Alu 1 304 -8 1229 123 0 0 chr2 40583861 40584031 -210103823 - AluSx SINE Alu -10 300 131 595 75 0 0 chr2 40584034 40584114 -210103740 - AluSx SINE Alu -232 80 1 259 351 80 21 chr2 40584166 40584354 -210103500 + L2 LINE L2 2837 3035 -237 1979 208 57 5 chr2 40585722 40586145 -210101709 - LTR65 LTR ERV1 0 669 225 429 222 30 20 chr2 40586145 40586244 -210101610 + Tigger4(Zombi) DNA MER2_type 1 100 -2631 869 198 46 5 chr2 40586247 40586464 -210101390 + L1MA3 LINE L1 2178 2403 -3743 238 245 0 61 chr2 40586480 40586578 -210101276 - L1MC4 LINE L1 -1339 6703 6612 23 0 0 0 chr2 40586579 40586602 -210101252 + AT_rich Low_complexity Low_complexity 1 23 0 6568 132 17 19 chr2 40586604 40588779 -210099075 + L1MA3 LINE L1 4138 6305 0 1722 134 82 0 chr2 40588779 40589047 -210098807 + AluSx SINE Alu 13 302 -10 37 18 0 18 chr2 40589047 40589067 -210098787 + AT_rich Low_complexity Low_complexity 1 20 -34 2185 101 0 7 chr2 40589067 40589363 -210098491 + AluSx SINE Alu 1 294 -18 37 18 0 18 chr2 40589363 40589397 -210098457 + AT_rich Low_complexity Low_complexity 20 54 0 1531 189 25 0 chr2 40589647 40589922 -210097932 + AluJo SINE Alu 1 282 -30 413 232 93 57 chr2 40590002 40590196 -210097658 + L1MC5 LINE L1 7305 7505 -456 2003 197 150 21 chr2 40590275 40590855 -210096999 - L1MB8 LINE L1 -3 6175 5521 321 278 68 21 chr2 40590876 40591093 -210096761 + L1ME4a LINE L1 5979 6093 -28 221 304 0 25 chr2 40591210 40591289 -210096565 - L2 LINE L2 -16 3256 3180 186 250 50 0 chr2 40591361 40591401 -210096453 - L2 LINE L2 -200 3072 3031 319 224 9 122 chr2 40591802 40591909 -210095945 + MER58C DNA MER1_type 121 215 0 372 276 63 31 chr2 40592292 40592419 -210095435 - MIR3 SINE MIR -76 132 2 21 0 0 0 chr2 40592876 40592897 -210094957 + AT_rich Low_complexity Low_complexity 1 21 0 1180 230 15 23 chr2 40592989 40593250 -210094604 - MIR SINE MIR -2 260 2 290 237 32 0 chr2 40593492 40593585 -210094269 + (TA)n Simple_repeat Simple_repeat 1 96 0 1907 176 52 8 chr2 40595473 40595585 -210092269 - L1MB7 LINE L1 -8 6176 6065 960 221 138 32 chr2 40595585 40595956 -210091898 - L1MC4 LINE L1 -1986 6056 5647 * 1522 165 77 32 chr2 40595945 40596376 -210091478 - L1MB8 LINE L1 -775 5371 4922 347 290 55 52 chr2 40597051 40597246 -210090608 + MIR3 SINE MIR 14 203 -5 185 324 69 39 chr2 40597370 40597472 -210090382 - MER5A DNA MER1_type -83 106 2 220 333 42 0 chr2 40597386 40597458 -210090396 + MER5B DNA MER1_type 100 174 -4 2235 147 22 0 chr2 40597808 40598175 -210089679 - THE1C LTR MaLR 0 375 1 242 122 0 24 chr2 40598454 40598495 -210089359 + MER58A DNA MER1_type 45 84 -23 1765 153 3 31 chr2 40598502 40598796 -210089058 + AluJo SINE Alu 13 298 -14 535 188 31 0 chr2 40598798 40598894 -210088960 + MER58A DNA MER1_type 126 224 0 2265 118 0 0 chr2 40598931 40599244 -210088610 + AluSq SINE Alu 1 313 0 774 181 0 0 chr2 40599246 40599379 -210088475 + MER3 DNA MER1_type 1 133 -76 3081 200 96 43 chr2 40599444 40600219 -210087635 - L1ME1 LINE L1 -24 6142 5409 386 20 20 0 chr2 40600219 40600270 -210087584 + (TA)n Simple_repeat Simple_repeat 2 53 0 3081 200 96 43 chr2 40600270 40600299 -210087555 - L1ME1 LINE L1 -757 5409 5383 2310 103 0 7 chr2 40600299 40600599 -210087255 - AluSq SINE Alu -15 298 1 3081 200 96 43 chr2 40600599 40600661 -210087193 - L1ME1 LINE L1 -783 5383 5326 2081 186 3 13 chr2 40600661 40601053 -210086801 + MLT1B LTR MaLR 3 390 0 3081 200 96 43 chr2 40601053 40601473 -210086381 - L1ME1 LINE L1 -840 5326 4930 2037 142 6 10 chr2 40601473 40601784 -210086070 - AluSx SINE Alu -2 310 1 3081 200 96 43 chr2 40601784 40602114 -210085740 - L1ME1 LINE L1 -1236 4930 4439 282 197 66 0 chr2 40602116 40602177 -210085677 + MER3 DNA MER1_type 144 208 -1 247 293 0 0 chr2 40602133 40602191 -210085663 - MER3 DNA MER1_type -117 92 35 * 22 0 0 0 chr2 40602550 40602572 -210085282 + AT_rich Low_complexity Low_complexity 1 22 0 1155 263 120 63 chr2 40602937 40604545 -210083309 + L1MEd LINE L1 6 1580 -4551 291 252 111 83 chr2 40604759 40604972 -210082882 + MER20B DNA MER1_type 1 214 -5 328 316 25 32 chr2 40605039 40605197 -210082657 - MER5A DNA MER1_type -30 159 3 24 0 0 0 chr2 40605431 40605455 -210082399 + AT_rich Low_complexity Low_complexity 1 24 0 2494 63 0 13 chr2 40605741 40606056 -210081798 + AluY SINE Alu 1 311 0 474 268 14 7 chr2 40606057 40606195 -210081659 - MER103 DNA DNA -24 142 4 426 235 12 0 chr2 40606262 40606347 -210081507 + L2 LINE L2 3185 3270 -2 596 213 102 35 chr2 40606354 40606551 -210081303 + MER63A DNA MER1_type 1 210 0 2355 82 0 13 chr2 40606568 40606873 -210080981 + AluSc SINE Alu 1 301 -8 1924 203 53 0 chr2 40607280 40607654 -210080200 + MSTD LTR MaLR 3 396 0 33 0 0 0 chr2 40608183 40608216 -210079638 + AT_rich Low_complexity Low_complexity 1 33 0 557 58 0 0 chr2 40608216 40608285 -210079569 - U6 snRNA snRNA -37 70 2 1045 215 75 26 chr2 40608378 40608606 -210079248 + MER8 DNA MER2_type 1 239 0 210 375 25 17 chr2 40608959 40609079 -210078775 - L2 LINE L2 -653 2661 2541 318 106 0 0 chr2 40609980 40610027 -210077827 + (CA)n Simple_repeat Simple_repeat 2 48 0 1806 169 7 13 chr2 40610699 40611006 -210076848 - AluJo SINE Alu -7 305 1 2386 61 24 0 chr2 40611146 40611440 -210076414 - AluY SINE Alu -10 301 1 679 326 66 10 chr2 40611939 40612350 -210075504 + L1MC4a LINE L1 4273 4706 -1440 892 221 122 61 chr2 40612464 40613085 -210074769 + L1MC4a LINE L1 5268 5926 -1882 28 29 0 0 chr2 40613253 40613288 -210074566 + AT_rich Low_complexity Low_complexity 1 35 0 384 88 0 0 chr2 40613372 40613429 -210074425 + (TAA)n Simple_repeat Simple_repeat 2 58 0 2097 128 13 13 chr2 40613430 40613735 -210074119 + AluSx SINE Alu 1 305 -7 235 299 103 21 chr2 40614888 40614985 -210072869 + L2 LINE L2 2552 2656 -658 374 320 133 22 chr2 40615089 40615451 -210072403 - L1 LINE L1 -2867 3279 2878 2196 277 97 20 chr2 40615657 40616185 -210071669 + L1MEc LINE L1 162 648 -5748 1561 187 3 10 chr2 40616185 40616485 -210071369 + AluJb SINE Alu 1 298 -14 2196 277 97 20 chr2 40616485 40617131 -210070723 + L1MEc LINE L1 648 1426 -4970 1089 215 67 100 chr2 40617142 40617840 -210070014 + L1MEc LINE L1 3024 3698 -2517 * 17136 136 43 27 chr2 40617839 40619277 -210068577 + L1M1 LINE L1 12 1426 -6139 2366 103 3 0 chr2 40619277 40619588 -210068266 - AluSp SINE Alu -1 312 1 17136 136 43 27 chr2 40619588 40620254 -210067600 + L1M1 LINE L1 1426 2080 -5485 1844 172 3 13 chr2 40620254 40620562 -210067292 + AluJb SINE Alu 1 305 -7 17136 136 43 27 chr2 40620562 40621550 -210066304 + L1M1 LINE L1 2080 3154 -4411 1147 241 104 11 chr2 40621537 40622006 -210065848 + L1MEc LINE L1 3668 4180 -2035 * 9715 118 44 41 chr2 40622006 40622218 -210065636 + Tigger2 DNA MER2_type 965 1175 -1543 1677 188 0 40 chr2 40622218 40622542 -210065312 - AluJb SINE Alu 0 312 2 9715 118 44 41 chr2 40622542 40624077 -210063777 + Tigger2 DNA MER2_type 1175 2717 -1 611 192 0 0 chr2 40624115 40624214 -210063640 + FLAM_A SINE Alu 1 99 -43 215 364 15 0 chr2 40626112 40626178 -210061676 - L2 LINE L2 -5 3267 3201 451 303 8 8 chr2 40627007 40627139 -210060715 - L2 LINE L2 -15 3298 3167 503 312 98 30 chr2 40627344 40627578 -210060276 - MIR SINE MIR 0 262 13 189 309 48 48 chr2 40627935 40628019 -210059835 - MIR SINE MIR -73 135 52 2132 102 0 7 chr2 40629261 40629556 -210058298 + AluY SINE Alu 1 293 -18 2407 97 0 3 chr2 40630337 40630648 -210057206 + AluSx SINE Alu 1 310 -2 225 0 0 0 chr2 40630648 40630673 -210057181 + (TA)n Simple_repeat Simple_repeat 2 26 0 284 125 0 0 chr2 40630775 40630823 -210057031 + L1MB8 LINE L1 6130 6177 -1 815 258 57 16 chr2 40631482 40631730 -210056124 + MIR SINE MIR 2 259 -3 3015 205 127 92 chr2 40631812 40631875 -210055979 + L1MC3 LINE L1 6397 6456 -1329 2377 84 3 0 chr2 40631875 40632185 -210055669 - AluY SINE Alu 0 311 1 3015 205 127 92 chr2 40632185 40632588 -210055266 + L1MC3 LINE L1 6456 6843 -942 2150 119 0 10 chr2 40632588 40632890 -210054964 + AluSc SINE Alu 1 299 -10 3015 205 127 92 chr2 40632890 40633114 -210054740 + L1MC3 LINE L1 6843 7058 -727 355 237 32 21 chr2 40633114 40633207 -210054647 + MLT1B LTR MaLR 37 130 -437 3015 205 127 92 chr2 40633207 40633764 -210054090 + L1MC3 LINE L1 7058 7785 0 22 35 0 0 chr2 40633983 40634012 -210053842 + AT_rich Low_complexity Low_complexity 1 29 0 1873 156 20 7 chr2 40635078 40635380 -210052474 - AluJo SINE Alu -6 306 1 851 206 22 119 chr2 40635931 40636045 -210051809 + MIR SINE MIR 1 125 -137 786 173 0 0 chr2 40636045 40636178 -210051676 - FLAM_C SINE Alu 0 133 1 851 206 22 119 chr2 40636178 40636340 -210051514 + MIR SINE MIR 125 250 -12 1074 164 15 0 chr2 40637061 40637256 -210050598 + MLT1B LTR MaLR 193 390 0 5352 200 84 73 chr2 40637256 40638618 -210049236 + L1MC4 LINE L1 4817 6162 -1880 2520 58 0 0 chr2 40638618 40638911 -210048943 - AluSx SINE Alu -19 293 1 5352 200 84 73 chr2 40638911 40639215 -210048639 + L1MC4 LINE L1 6162 6461 -1581 1982 153 0 3 chr2 40639215 40639522 -210048332 + AluJo SINE Alu 1 306 -6 5352 200 84 73 chr2 40639522 40640055 -210047799 + L1MC4 LINE L1 6461 6987 -1055 1324 207 102 12 chr2 40640055 40640398 -210047456 + MLT1A2 LTR MaLR 1 374 0 5352 200 84 73 chr2 40640398 40641379 -210046475 + L1MC4 LINE L1 6987 8031 -11 288 259 103 62 chr2 40641536 40641926 -210045928 + L1MCa LINE L1 1454 1916 -871 2183 80 7 30 chr2 40643060 40643360 -210044494 + AluSq SINE Alu 1 293 -20 2442 73 10 0 chr2 40643455 40643757 -210044097 + AluSg SINE Alu 1 305 -5 478 234 39 0 chr2 40643962 40644090 -210043764 + L1ME2 LINE L1 4464 4596 -1550 590 199 90 32 chr2 40644103 40644337 -210043517 + L1MD3 LINE L1 6115 7985 -10 1144 217 29 0 chr2 40644341 40644618 -210043236 + L1ME2 LINE L1 4599 4883 -1263 310 240 90 40 chr2 40644621 40644721 -210043133 + L1ME2 LINE L1 5911 6015 -149 921 67 0 0 chr2 40644721 40644841 -210043013 - THE1B LTR MaLR 0 364 245 24 0 0 0 chr2 40645185 40645209 -210042645 + AT_rich Low_complexity Low_complexity 1 24 0 660 215 140 27 chr2 40645637 40645823 -210042031 - L2 LINE L2 0 3313 3107 303 233 0 0 chr2 40645832 40645892 -210041962 + MER69 DNA AcHobo 8 67 -1159 568 172 97 0 chr2 40646033 40646167 -210041687 + MER69 DNA AcHobo 2380 2526 0 434 254 71 46 chr2 40646184 40646381 -210041473 - L2 LINE L2 -225 3088 2887 609 149 119 37 chr2 40646477 40646611 -210041243 - MIR SINE MIR -115 147 3 193 242 32 0 chr2 40647082 40647144 -210040710 - L3b LINE CR1 -200 1383 1320 415 202 22 0 chr2 40647674 40647763 -210040091 + MER103 DNA DNA 7 97 -69 195 191 115 0 chr2 40648618 40648666 -210039188 - MIR SINE MIR -89 119 66 762 236 192 0 chr2 40649328 40649536 -210038318 + MIR SINE MIR 15 262 0 425 313 215 24 chr2 40649804 40650453 -210037401 + L2 LINE L2 2544 3305 -8 189 74 0 0 chr2 40651781 40651808 -210036046 + (CCG)n Simple_repeat Simple_repeat 3 29 0 30 0 0 0 chr2 40651849 40651879 -210035975 + GC_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr2 40653357 40653382 -210034472 + AT_rich Low_complexity Low_complexity 1 25 0 2252 109 0 3 chr2 40653705 40654009 -210033845 - AluSp SINE Alu -10 303 1 457 311 101 0 chr2 40654453 40654601 -210033253 - L3 LINE CR1 -23 1554 1392 740 243 150 0 chr2 40654632 40654858 -210032996 - MIR SINE MIR 0 262 3 217 313 0 73 chr2 40654916 40655012 -210032842 - L2 LINE L2 -31 3241 3153 2391 81 3 3 chr2 40655084 40655391 -210032463 + AluSx SINE Alu 1 307 -5 28 0 0 0 chr2 40655933 40655961 -210031893 + AT_rich Low_complexity Low_complexity 1 28 0 2133 112 0 14 chr2 40655961 40656256 -210031598 + AluSx SINE Alu 1 291 -21 579 152 0 18 chr2 40656279 40656391 -210031463 - L1MA9 LINE L1 -5 6307 6198 294 279 76 0 chr2 40656541 40656620 -210031234 + MIR SINE MIR 23 107 -155 207 136 45 23 chr2 40656665 40656709 -210031145 + MIR SINE MIR 218 262 0 2390 90 10 0 chr2 40656729 40657039 -210030815 - AluSp SINE Alu 0 313 1 214 395 120 8 chr2 40657112 40657494 -210030360 - L2 LINE L2 -663 2651 2227 2390 124 22 8 chr2 40657518 40657888 -210029966 + THE1C LTR MaLR 1 375 0 1765 191 3 7 chr2 40658100 40658393 -210029461 - AluJb SINE Alu -20 292 1 229 238 159 24 chr2 40658586 40658712 -210029142 - MER20B DNA MER1_type -604 179 37 284 324 9 19 chr2 40658989 40659094 -210028760 - L2 LINE L2 -191 3081 2978 530 334 0 76 chr2 40659134 40659436 -210028418 - L2 LINE L2 -455 2859 2581 496 290 99 36 chr2 40659704 40660069 -210027785 + LTR16B LTR ERVL 53 440 -24 232 308 92 8 chr2 40660096 40660216 -210027638 - L2 LINE L2 -1298 2016 1887 449 297 126 19 chr2 40660241 40660510 -210027344 - L3 LINE CR1 -331 1246 949 4142 112 28 121 chr2 40660984 40661431 -210026423 + Tigger3(Golem) DNA MER2_type 3 490 -2539 755 167 0 0 chr2 40661431 40661551 -210026303 + FLAM_C SINE Alu 3 122 -11 4142 112 28 121 chr2 40661551 40661755 -210026099 + Tigger3(Golem) DNA MER2_type 490 712 -2317 470 250 0 0 chr2 40661755 40661843 -210026011 + FLAM_A SINE Alu 2 89 -53 4142 112 28 121 chr2 40661843 40661948 -210025906 + Tigger3(Golem) DNA MER2_type 712 825 -2204 1842 171 0 10 chr2 40661948 40662241 -210025613 + AluJo SINE Alu 12 301 -11 4142 112 28 121 chr2 40662241 40662727 -210025127 + Tigger3(Golem) DNA MER2_type 825 3029 0 2380 89 3 0 chr2 40663258 40663561 -210024293 + AluSg SINE Alu 1 304 -6 2324 82 0 3 chr2 40663568 40663874 -210023980 + AluY SINE Alu 1 305 -6 2130 48 45 4 chr2 40663883 40664182 -210023672 + AluY SINE Alu 1 310 0 2041 103 45 3 chr2 40664358 40664650 -210023204 - AluSc SINE Alu -5 304 1 2199 115 0 3 chr2 40664742 40665037 -210022817 - AluSq SINE Alu -19 294 1 2330 97 3 0 chr2 40666332 40666616 -210021238 + AluSx SINE Alu 1 288 -24 207 0 0 0 chr2 40666616 40666639 -210021215 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 2330 97 3 0 chr2 40666639 40666654 -210021200 + AluSx SINE Alu 288 301 -11 236 312 73 9 chr2 40666861 40666970 -210020884 - MIR SINE MIR -46 216 101 252 268 37 49 chr2 40667008 40667090 -210020764 - L2 LINE L2 -16 3256 3176 670 177 95 20 chr2 40667292 40667439 -210020415 + FRAM SINE Alu 11 168 -8 664 327 50 13 chr2 40667471 40667850 -210020004 + L1ME3A LINE L1 5558 5950 -220 1825 150 3 55 chr2 40668294 40668621 -210019233 - AluJo SINE Alu 0 312 1 224 217 98 76 chr2 40668755 40668847 -210019007 + L2 LINE L2 3179 3272 -41 2305 71 0 10 chr2 40669128 40669423 -210018431 + AluY SINE Alu 3 294 -17 251 226 84 84 chr2 40670940 40671070 -210016784 + L1ME1 LINE L1 2197 2326 -4100 2345 82 3 10 chr2 40671070 40671373 -210016481 + AluSp SINE Alu 1 301 -12 251 226 84 84 chr2 40671373 40671503 -210016351 + L1ME1 LINE L1 2325 2457 -3969 2422 268 94 20 chr2 40671516 40672456 -210015398 + L1ME1 LINE L1 2423 3477 -2949 1488 203 17 7 chr2 40672456 40672746 -210015108 + AluJb SINE Alu 1 293 -19 2422 268 94 20 chr2 40672746 40673037 -210014817 + L1ME1 LINE L1 3477 3745 -2681 3776 205 51 27 chr2 40673069 40673136 -210014718 + L1ME1 LINE L1 5312 5376 -1070 333 0 0 0 chr2 40673136 40673173 -210014681 + (CA)n Simple_repeat Simple_repeat 2 38 0 3776 205 51 27 chr2 40673173 40673207 -210014647 + L1ME1 LINE L1 5376 5408 -1038 700 212 8 0 chr2 40673207 40673339 -210014515 + FLAM_C SINE Alu 1 133 0 3776 205 51 27 chr2 40673339 40674013 -210013841 + L1ME1 LINE L1 5408 6110 -336 2019 126 17 0 chr2 40674013 40674306 -210013548 + AluSq SINE Alu 1 298 -15 3776 205 51 27 chr2 40674306 40674646 -210013208 + L1ME1 LINE L1 6110 6441 -5 1080 253 106 3 chr2 40674640 40674952 -210012902 + L1ME3A LINE L1 5296 5639 -531 * 1460 223 78 21 chr2 40674975 40675143 -210012711 + L1ME3A LINE L1 5756 5913 -257 2307 82 0 0 chr2 40675143 40675457 -210012397 + AluSc SINE Alu 1 314 0 1460 223 78 21 chr2 40675457 40675669 -210012185 + L1ME3A LINE L1 5913 6159 -11 300 346 31 8 chr2 40675953 40676083 -210011771 + L1MB7 LINE L1 5692 5824 -297 252 272 88 35 chr2 40676305 40676419 -210011435 - LTR67 LTR ERVL -4 553 434 2054 124 44 0 chr2 40676523 40676821 -210011033 + AluSx SINE Alu 1 311 -1 388 244 110 73 chr2 40676875 40677039 -210010815 - MLT1K LTR MaLR -411 177 8 237 83 0 28 chr2 40677203 40677239 -210010615 - MLT1F LTR MaLR -8 559 525 586 191 180 10 chr2 40677248 40677442 -210010412 + L1MB7 LINE L1 5953 6179 -5 498 224 8 96 chr2 40677451 40677554 -210010300 - MER81 DNA DNA 0 114 22 2430 92 7 0 chr2 40677554 40677860 -210009994 + AluSq SINE Alu 1 308 -5 498 224 8 96 chr2 40677860 40677881 -210009973 - MER81 DNA DNA -92 22 1 1341 227 118 6 chr2 40677881 40678186 -210009668 - MLT1F LTR MaLR -32 510 168 1106 184 61 54 chr2 40678279 40678573 -210009281 - AluJo SINE Alu -6 306 11 397 233 92 98 chr2 40678591 40678754 -210009100 - MLT1F LTR MaLR -380 162 1 2341 102 0 3 chr2 40678769 40679072 -210008782 - AluSx SINE Alu -10 302 1 494 284 204 4 chr2 40679148 40679423 -210008431 - L1ME LINE L1 -411 5710 5381 192 125 0 0 chr2 40679478 40679510 -210008344 + (TA)n Simple_repeat Simple_repeat 2 33 0 479 332 33 51 chr2 40679700 40680034 -210007820 - L2 LINE L2 -436 2878 2551 1223 270 42 15 chr2 40680235 40680568 -210007286 + LTR16A LTR ERVL 16 357 -93 263 212 15 15 chr2 40680570 40680636 -210007218 + CT-rich Low_complexity Low_complexity 4 69 0 532 172 0 11 chr2 40680670 40680757 -210007097 + LTR16A LTR ERVL 360 445 -5 232 327 187 23 chr2 40680996 40681253 -210006601 - L2 LINE L2 -778 2536 2238 258 256 79 67 chr2 40681316 40681522 -210006332 + HAL1 LINE L1 916 1129 -1378 2489 90 0 0 chr2 40681522 40681832 -210006022 + AluSx SINE Alu 1 310 -2 258 256 79 67 chr2 40681832 40681941 -210005913 + HAL1 LINE L1 1129 1235 -1272 436 328 57 57 chr2 40682047 40682501 -210005353 - L2 LINE L2 -1641 1673 1220 4373 89 5 16 chr2 40682847 40683407 -210004447 + MER41A LTR ERV1 1 554 0 339 239 64 28 chr2 40683421 40683530 -210004324 + L2 LINE L2 3200 3312 -1 537 30 0 0 chr2 40685111 40685178 -210002676 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 1021 288 119 23 chr2 40685284 40686043 -210001811 - L1MC4a LINE L1 -749 5397 5054 1072 237 60 8 chr2 40686091 40686357 -210001497 + L2 LINE L2 2581 2860 -454 223 179 0 0 chr2 40686356 40686395 -210001459 + MIR SINE MIR 217 255 -7 * 317 258 138 12 chr2 40686433 40686653 -210001201 + L1ME LINE L1 5475 5719 -447 500 290 30 84 chr2 40686743 40687040 -210000814 - L1MC4a LINE L1 -2197 3949 3669 334 48 26 12 chr2 40687052 40687102 -210000752 - MER41B LTR ERV1 -88 547 515 2287 97 0 31 chr2 40687102 40687421 -210000433 + AluSc SINE Alu 1 309 0 334 48 26 12 chr2 40687421 40687457 -210000397 - MER41B LTR ERV1 -120 515 481 308 280 79 90 chr2 40687460 40687665 -210000189 - L1MC4a LINE L1 -2409 3737 3531 2323 87 3 0 chr2 40687665 40687963 -209999891 + AluSp SINE Alu 1 299 -14 308 280 79 90 chr2 40687963 40688154 -209999700 - L1MC4a LINE L1 -2615 3531 3339 1978 116 0 51 chr2 40688154 40688477 -209999377 - AluSg SINE Alu 0 309 2 308 280 79 90 chr2 40688477 40688512 -209999342 - L1MC4a LINE L1 -2807 3339 3305 1996 145 0 7 chr2 40688512 40688815 -209999039 + AluJb SINE Alu 1 301 -11 308 280 79 90 chr2 40688815 40688942 -209998912 - L1MC4a LINE L1 -2841 3305 3178 1471 190 84 16 chr2 40688942 40689263 -209998591 + MER2 DNA MER2_type 1 343 -1 308 280 79 90 chr2 40689263 40689295 -209998559 - L1MC4a LINE L1 -2968 3178 3147 432 37 0 0 chr2 40689295 40689349 -209998505 + (TG)n Simple_repeat Simple_repeat 2 55 0 308 280 79 90 chr2 40689349 40689438 -209998416 - L1MC4a LINE L1 -2999 3147 3060 2194 126 0 3 chr2 40689480 40689782 -209998072 + AluSg SINE Alu 1 301 -9 2182 117 0 3 chr2 40690002 40690300 -209997554 + AluSq SINE Alu 1 297 -16 201 121 0 0 chr2 40690571 40690604 -209997250 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 182 337 120 23 chr2 40691138 40691571 -209996283 + L2 LINE L2 1846 2320 -994 2080 128 0 0 chr2 40691637 40691918 -209995936 - AluSx SINE Alu -31 281 1 2797 147 21 7 chr2 40692462 40692884 -209994970 + MSTA LTR MaLR 1 428 0 194 317 0 0 chr2 40693490 40693550 -209994304 + L2 LINE L2 2992 3051 -221 267 190 122 21 chr2 40694519 40694615 -209993239 + MIR SINE MIR 32 148 -60 2319 87 10 3 chr2 40694919 40695230 -209992624 + AluSq SINE Alu 1 313 0 288 0 0 0 chr2 40695419 40695451 -209992403 + (TA)n Simple_repeat Simple_repeat 2 33 0 2122 102 10 3 chr2 40695451 40695745 -209992109 - AluSp SINE Alu -17 296 1 22 88 0 0 chr2 40695966 40696023 -209991831 + AT_rich Low_complexity Low_complexity 1 57 0 833 166 40 0 chr2 40696023 40696174 -209991680 - L1MA7 LINE L1 0 6291 6135 260 284 20 10 chr2 40696245 40696347 -209991507 + (TATATG)n Simple_repeat Simple_repeat 6 108 0 2038 91 33 4 chr2 40696836 40697142 -209990712 - AluSq SINE Alu 0 314 1 259 240 19 0 chr2 40697229 40697333 -209990521 + (TA)n Simple_repeat Simple_repeat 2 107 0 1762 175 10 13 chr2 40697349 40697652 -209990202 - AluJo SINE Alu -10 302 1 2161 161 17 61 chr2 40698779 40699189 -209988665 + MSTD LTR MaLR 3 394 -2 1996 103 78 7 chr2 40700284 40700566 -209987288 - AluSx SINE Alu -10 302 1 237 290 0 16 chr2 40701302 40701364 -209986490 + GA-rich Low_complexity Low_complexity 2 62 0 948 126 0 0 chr2 40701486 40701637 -209986217 + (TC)n Simple_repeat Simple_repeat 2 152 0 2267 93 0 0 chr2 40701639 40701919 -209985935 - AluSx SINE Alu -32 280 1 279 306 14 0 chr2 40702594 40702666 -209985188 + polypyrimidine Low_complexity Low_complexity 1 73 0 1298 165 169 8 chr2 40702845 40703111 -209984743 - 7SLRNA srpRNA srpRNA -11 309 1 1786 174 10 0 chr2 40703238 40703532 -209984322 - AluJb SINE Alu -15 297 1 2257 102 7 0 chr2 40703545 40703850 -209984004 - AluSx SINE Alu -5 307 1 427 262 153 16 chr2 40703877 40704060 -209983794 - L1M4 LINE L1 -351 5811 5604 2187 99 3 0 chr2 40704213 40704507 -209983347 - AluY SINE Alu -15 296 2 2200 128 0 0 chr2 40704546 40704844 -209983010 + AluSx SINE Alu 1 298 -14 2291 120 3 0 chr2 40704945 40705253 -209982601 + AluSx SINE Alu 1 309 -3 2254 115 0 0 chr2 40705537 40705832 -209982022 - AluSx SINE Alu -13 299 5 2224 78 24 7 chr2 40705894 40706187 -209981667 - AluY SINE Alu -11 300 3 278 253 0 24 chr2 40706492 40706575 -209981279 + MIR SINE MIR 182 262 0 490 131 48 0 chr2 40707929 40708013 -209979841 - L1MA9 LINE L1 0 6312 6225 204 250 0 0 chr2 40708015 40708063 -209979791 + (TA)n Simple_repeat Simple_repeat 2 49 0 260 136 169 0 chr2 40708065 40708124 -209979730 + L1MA9 LINE L1 6225 6293 -19 225 121 17 52 chr2 40708124 40708182 -209979672 + (TA)n Simple_repeat Simple_repeat 2 57 0 285 51 0 0 chr2 40708182 40708221 -209979633 - L1MA9 LINE L1 -119 6193 6155 194 146 0 24 chr2 40708221 40708262 -209979592 + (TTTC)n Simple_repeat Simple_repeat 3 42 0 2883 166 14 4 chr2 40708263 40708758 -209979096 - L1MA9 LINE L1 -148 6164 5665 2121 113 24 0 chr2 40708758 40709049 -209978805 - AluSx SINE Alu -14 298 1 2206 135 0 0 chr2 40709154 40709465 -209978389 + AluSx SINE Alu 2 312 0 338 273 35 43 chr2 40709986 40710146 -209977708 - MIR SINE MIR -46 162 13 1212 153 157 32 chr2 40710550 40710950 -209976904 - AluJo SINE Alu 0 433 3 715 140 9 9 chr2 40711243 40711357 -209976497 - FLAM_A SINE Alu -17 125 12 231 188 0 0 chr2 40711587 40711635 -209976219 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 646 183 58 0 chr2 40711899 40712003 -209975851 - FLAM_A SINE Alu -32 110 1 7740 38 5 0 chr2 40712497 40713371 -209974483 + L1PA5 LINE L1 5271 6148 -6 369 227 0 0 chr2 40713783 40713858 -209973996 - MER63 DNA MER1_type -9 1051 977 329 279 47 0 chr2 40713860 40713946 -209973908 - MER63 DNA MER1_type -94 742 27 1109 206 52 28 chr2 40714079 40714327 -209973527 - MLT1D LTR MaLR 0 505 252 192 179 0 0 chr2 40714378 40714417 -209973437 + (TG)n Simple_repeat Simple_repeat 1 39 0 645 198 26 73 chr2 40714435 40714627 -209973227 - MLT1D LTR MaLR -322 183 1 2014 100 75 0 chr2 40714698 40714978 -209972876 - AluY SINE Alu -10 301 1 249 33 0 0 chr2 40716122 40716152 -209971702 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 203 61 30 0 chr2 40716153 40716186 -209971668 + (TC)n Simple_repeat Simple_repeat 1 34 0 1129 172 0 0 chr2 40716196 40716365 -209971489 - FAM SINE Alu -5 170 2 261 75 0 0 chr2 40716368 40716408 -209971446 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 2315 123 0 0 chr2 40716408 40716718 -209971136 - AluSq SINE Alu -2 311 2 366 242 117 16 chr2 40716722 40716850 -209971004 + MIR SINE MIR 122 262 0 1827 179 28 11 chr2 40716867 40717225 -209970629 + MLT1A1 LTR MaLR 1 364 -1 417 288 107 19 chr2 40717879 40718084 -209969770 - MIR SINE MIR -39 223 1 1867 150 0 35 chr2 40718092 40718405 -209969449 - AluJb SINE Alu -10 302 1 273 57 0 0 chr2 40718532 40718567 -209969287 + (A)n Simple_repeat Simple_repeat 1 35 0 2203 128 3 3 chr2 40718569 40718874 -209968980 + AluSq SINE Alu 1 305 -8 430 220 193 27 chr2 40718882 40719032 -209968822 - MER96 DNA MER1_type 0 175 1 319 157 12 72 chr2 40719070 40719153 -209968701 - LTR41 LTR ERVL 0 773 696 259 210 48 0 chr2 40720244 40720306 -209967548 + MER5B DNA MER1_type 1 65 -113 641 165 15 38 chr2 40720331 40720464 -209967390 + FLAM_C SINE Alu 11 140 -3 2117 130 0 13 chr2 40720588 40720903 -209966951 + AluSx SINE Alu 1 311 -1 1030 196 126 0 chr2 40721619 40721818 -209966036 - MER58A DNA MER1_type 0 224 1 720 276 71 4 chr2 40721985 40722210 -209965644 - MIR SINE MIR -3 259 20 1741 209 139 20 chr2 40722389 40722849 -209965005 + LTR40a LTR ERVL 5 519 0 365 317 55 24 chr2 40723144 40723308 -209964546 + MER5A DNA MER1_type 2 170 -19 1041 206 25 0 chr2 40723413 40723617 -209964237 - MER3 DNA MER1_type 0 209 1 939 149 25 113 chr2 40723619 40723901 -209963953 + L1MC5 LINE L1 6796 7052 -909 373 312 32 38 chr2 40724018 40724175 -209963679 + LTR16C LTR ERVL 336 491 0 180 0 0 0 chr2 40724814 40724834 -209963020 + (CTGGGG)n Simple_repeat Simple_repeat 1 20 0 659 248 108 6 chr2 40724990 40725147 -209962707 + MER63A DNA MER1_type 5 177 -33 2466 85 3 3 chr2 40725448 40725755 -209962099 - AluSp SINE Alu -6 307 1 275 179 15 0 chr2 40728635 40728702 -209959152 + (TG)n Simple_repeat Simple_repeat 1 68 0 298 307 69 53 chr2 40729118 40729307 -209958547 + MIR SINE MIR 20 211 -51 241 268 24 12 chr2 40729742 40729824 -209958030 + MER5A DNA MER1_type 1 83 -106 2241 201 84 33 chr2 40733502 40733832 -209954022 + MER119 DNA MER1_type 8 379 -204 1856 87 4 0 chr2 40733832 40734061 -209953793 - AluSc SINE Alu -16 293 64 2241 201 84 33 chr2 40734061 40734278 -209953576 + MER119 DNA MER1_type 379 583 0 465 173 314 59 chr2 40734481 40734551 -209953303 - MER5C DNA MER1_type -4 320 269 2022 164 41 50 chr2 40734551 40734967 -209952887 + MLT2D LTR ERVL 3 414 0 465 173 314 59 chr2 40734967 40735151 -209952703 - MER5C DNA MER1_type -55 269 1 213 235 0 0 chr2 40735168 40735219 -209952635 + (TA)n Simple_repeat Simple_repeat 2 52 0 735 162 18 24 chr2 40735220 40735387 -209952467 - L1MD3 LINE L1 -14 7981 7816 2194 135 127 16 chr2 40735393 40735778 -209952076 - MSTA LTR MaLR 0 428 1 8169 151 89 30 chr2 40735778 40737254 -209950600 - MSTA-int LTR MaLR 0 1580 17 2051 144 152 8 chr2 40737259 40737633 -209950221 - MSTA LTR MaLR 0 428 1 262 342 58 0 chr2 40738162 40738282 -209949572 + L2 LINE L2 3146 3272 0 246 238 25 25 chr2 40739826 40739906 -209947948 + MIR SINE MIR 165 244 -18 877 303 176 40 chr2 40740653 40741044 -209946810 + L2 LINE L2 1708 2045 -1227 2141 107 45 0 chr2 40741044 40741333 -209946521 - AluSx SINE Alu -10 302 1 877 303 176 40 chr2 40741333 40741940 -209945914 + L2 LINE L2 2045 2568 -704 2528 70 0 0 chr2 40741940 40742240 -209945614 - AluY SINE Alu -11 300 1 877 303 176 40 chr2 40742240 40742604 -209945250 + L2 LINE L2 2568 3271 -1 2431 81 0 0 chr2 40742714 40743011 -209944843 - AluY SINE Alu -14 297 1 215 406 0 9 chr2 40743224 40743330 -209944524 - L3 LINE CR1 -2 1575 1471 * 353 299 117 39 chr2 40743322 40743548 -209944306 - MIR SINE MIR -1 261 17 798 102 0 0 chr2 40743548 40743666 -209944188 + (CTATG)n Simple_repeat Simple_repeat 5 122 0 268 336 67 0 chr2 40743739 40743858 -209943996 - L3 LINE CR1 -211 1366 1240 267 116 116 29 chr2 40743883 40743952 -209943902 - L1ME4a LINE L1 -3 6118 6044 294 321 0 19 chr2 40744015 40744121 -209943733 - L3 LINE CR1 -607 970 867 1671 159 24 0 chr2 40744251 40744503 -209943351 - AluSx SINE Alu -54 258 1 498 350 138 35 chr2 40744511 40745077 -209942777 - L3 LINE CR1 -740 837 214 191 224 75 30 chr2 40745897 40745964 -209941890 + L2 LINE L2 3141 3210 -62 2068 152 8 37 chr2 40746116 40746337 -209941517 - MLT1A1 LTR MaLR 0 365 158 2405 85 0 7 chr2 40746337 40746642 -209941212 - AluSc SINE Alu -6 303 1 2068 152 8 37 chr2 40746642 40746796 -209941058 - MLT1A1 LTR MaLR -207 158 1 295 188 0 25 chr2 40746995 40747075 -209940779 + (CCCTAA)n Simple_repeat Simple_repeat 5 82 0 715 209 95 0 chr2 40747604 40747762 -209940092 - MER45A DNA AcHobo -5 173 1 256 248 80 80 chr2 40747767 40747904 -209939950 - MIR3 SINE MIR -69 139 3 880 193 74 72 chr2 40750738 40750811 -209937043 - L1MC5 LINE L1 -23 7938 7867 2250 96 0 3 chr2 40750811 40751102 -209936752 + AluSx SINE Alu 3 292 -20 880 193 74 72 chr2 40751102 40751459 -209936395 - L1MC5 LINE L1 -94 7867 7507 2526 155 39 45 chr2 40751466 40751977 -209935877 - L1MD3 LINE L1 0 7995 7488 2364 155 15 10 chr2 40752070 40752087 -209935767 - MER57A LTR ERV1 0 403 388 2113 133 10 0 chr2 40752087 40752396 -209935458 + AluSx SINE Alu 1 312 0 2364 155 15 10 chr2 40752396 40752779 -209935075 - MER57A LTR ERV1 -15 388 1 2211 131 0 0 chr2 40753097 40753402 -209934452 + AluSx SINE Alu 1 305 -7 1749 157 56 85 chr2 40753462 40753907 -209933947 - MSTB1 LTR MaLR 0 432 1 205 244 78 44 chr2 40754161 40754251 -209933603 - MIR SINE MIR -74 134 42 446 229 41 65 chr2 40756652 40756822 -209931032 + MIR3 SINE MIR 9 174 -34 461 242 75 134 chr2 40757945 40758251 -209929603 - MLT1I LTR MaLR -26 383 96 2744 147 9 71 chr2 40758447 40758796 -209929058 + L1MB7 LINE L1 5652 5956 -228 2233 119 0 13 chr2 40758796 40759106 -209928748 + AluSx SINE Alu 5 310 -2 2744 147 9 71 chr2 40759106 40759308 -209928546 + L1MB7 LINE L1 5956 6169 -15 1561 124 127 8 chr2 40760236 40760495 -209927359 - AluSg1 SINE Alu -13 296 7 361 153 0 0 chr2 40761476 40761535 -209926319 - L1MB2 LINE L1 -3 6168 6110 248 215 0 46 chr2 40761610 40761675 -209926179 + L2 LINE L2 3251 3312 -1 358 287 11 88 chr2 40762113 40762294 -209925560 + MER5B DNA MER1_type 8 174 -4 732 239 6 0 chr2 40762374 40762537 -209925317 - MER5B DNA MER1_type 0 178 15 2303 173 64 25 chr2 40762557 40762997 -209924857 + LTR32 LTR ERVL 15 471 0 267 258 103 62 chr2 40763001 40763071 -209924783 + MER5A DNA MER1_type 58 135 -54 4038 139 30 16 chr2 40763071 40763761 -209924093 - L1MB2 LINE L1 -11 6160 5461 267 258 103 62 chr2 40763761 40763787 -209924067 + MER5A DNA MER1_type 135 158 -31 2257 122 0 3 chr2 40764758 40765069 -209922785 + AluJb SINE Alu 1 310 -2 240 269 21 21 chr2 40766333 40766426 -209921428 - MLT1J LTR MaLR -4 507 415 770 286 126 14 chr2 40766433 40766727 -209921127 - HERVL LTR ERVL -3005 2649 2323 6867 131 23 7 chr2 40766739 40768781 -209919073 - L1MA8 LINE L1 0 6291 4220 1835 313 103 26 chr2 40768781 40769913 -209917941 - HERVL LTR ERVL -3420 2344 1096 1553 113 26 22 chr2 40770161 40770264 -209917590 - MER30 DNA MER1_type 0 230 129 2217 107 0 19 chr2 40770264 40770574 -209917280 - AluSg SINE Alu -5 305 2 1553 113 26 22 chr2 40770574 40770699 -209917155 - MER30 DNA MER1_type -101 129 1 1464 164 125 21 chr2 40771052 40771332 -209916522 - AluJb SINE Alu -3 309 1 342 271 59 8 chr2 40771654 40771772 -209916082 - LTR67 LTR ERVL -3 554 431 414 328 30 52 chr2 40771869 40772101 -209915753 - LTR67 LTR ERVL -293 264 38 751 158 94 170 chr2 40772229 40772283 -209915571 - MLT2B1 LTR ERVL 0 520 464 2262 92 3 3 chr2 40772283 40772577 -209915277 + AluSp SINE Alu 1 294 -19 751 158 94 170 chr2 40772577 40772589 -209915265 - MLT2B1 LTR ERVL -56 464 453 192 40 0 0 chr2 40772589 40772614 -209915240 + (TA)n Simple_repeat Simple_repeat 1 25 0 751 158 94 170 chr2 40772614 40773049 -209914805 - MLT2B1 LTR ERVL -67 453 1 355 259 35 12 chr2 40774079 40774164 -209913690 + MIR SINE MIR 20 106 -156 4973 125 16 36 chr2 40774235 40774570 -209913284 - L1MA4A LINE L1 -1 6302 5962 2282 111 0 0 chr2 40774570 40774867 -209912987 - AluSx SINE Alu -15 297 1 4973 125 16 36 chr2 40774867 40775240 -209912614 - L1MA4A LINE L1 -341 5962 5611 1614 181 7 20 chr2 40775240 40775544 -209912310 - AluJo SINE Alu -12 300 1 4973 125 16 36 chr2 40775544 40775658 -209912196 - L1MA4A LINE L1 -692 5611 5496 8967 200 35 41 chr2 40775671 40776080 -209911774 - L1 LINE L1 -2616 4232 3822 2468 86 0 0 chr2 40776080 40776383 -209911471 - AluSx SINE Alu -9 303 1 8967 200 35 41 chr2 40776383 40777138 -209910716 - L1 LINE L1 -3026 3822 3065 1473 201 15 4 chr2 40777138 40777406 -209910448 - AluJb SINE Alu -39 273 3 8967 200 35 41 chr2 40777406 40779384 -209908470 - L1 LINE L1 -3783 3065 1103 180 0 0 0 chr2 40779384 40779404 -209908450 + (CTG)n Simple_repeat Simple_repeat 1 20 0 8967 200 35 41 chr2 40779404 40779661 -209908193 - L1 LINE L1 -5745 1103 846 415 282 75 17 chr2 40779737 40779911 -209907943 - LTR67 LTR ERVL -2 555 372 201 214 161 0 chr2 40781750 40781806 -209906048 + MIR SINE MIR 11 75 -187 243 88 0 0 chr2 40782655 40782689 -209905165 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 891 139 29 0 chr2 40782707 40782844 -209905010 - AluJo SINE Alu -171 141 1 1260 165 100 117 chr2 40784016 40784385 -209903469 + MLT1A1 LTR MaLR 1 363 -2 553 239 18 0 chr2 40784385 40784493 -209903361 - MER81 DNA DNA -1 113 3 282 338 92 14 chr2 40784610 40784752 -209903102 + MIR3 SINE MIR 17 169 -39 438 329 64 26 chr2 40784847 40785081 -209902773 - MIR SINE MIR -11 251 9 404 295 118 89 chr2 40786132 40786580 -209901274 + L2 LINE L2 2812 3272 0 180 237 0 0 chr2 40786598 40786636 -209901218 - L2 LINE L2 -10 3303 3266 2235 121 6 18 chr2 40786810 40787052 -209900802 - MER2 DNA MER2_type -10 335 97 4709 114 2 12 chr2 40787052 40787694 -209900160 - MER41B LTR ERV1 0 635 1 2235 121 6 18 chr2 40787694 40787790 -209900064 - MER2 DNA MER2_type -248 97 1 2255 96 0 10 chr2 40788344 40788635 -209899219 - AluSg SINE Alu -20 290 3 1630 184 0 54 chr2 40788642 40788957 -209898897 - AluJo SINE Alu -14 298 1 2217 113 3 10 chr2 40789068 40789379 -209898475 - AluSx SINE Alu -3 309 1 24 32 0 0 chr2 40789394 40789425 -209898429 + AT_rich Low_complexity Low_complexity 1 31 0 195 42 0 0 chr2 40789659 40789683 -209898171 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 43085 55 3 1 chr2 40789685 40795819 -209892035 - L1PA5 LINE L1 0 6154 11 2248 98 0 0 chr2 40795989 40796276 -209891578 + AluSc SINE Alu 1 287 -22 5512 136 38 24 chr2 40796299 40797290 -209890564 - L1MA4 LINE L1 -6 6294 5290 3180 159 5 10 chr2 40797297 40797877 -209889977 - L1 LINE L1 -775 5371 4795 244 352 37 37 chr2 40797941 40798049 -209889805 - MIR SINE MIR -62 146 39 629 321 87 0 chr2 40798377 40798595 -209889259 - MIR SINE MIR -20 242 6 712 121 0 0 chr2 40799758 40799849 -209888005 - AluSx SINE Alu -15 295 205 4198 135 98 92 chr2 40799850 40801229 -209886625 + pTR5 LTR ERV1 385 714 0 1319 106 106 0 chr2 40801229 40801418 -209886436 - AluSx SINE Alu -103 209 1 22 0 0 0 chr2 40801424 40801446 -209886408 + AT_rich Low_complexity Low_complexity 1 22 0 264 262 16 0 chr2 40801545 40801606 -209886248 + CT-rich Low_complexity Low_complexity 2 63 0 488 256 131 60 chr2 40801811 40802124 -209885730 - L1ME3A LINE L1 -264 5906 5575 2140 120 3 7 chr2 40803423 40803723 -209884131 - AluSx SINE Alu -13 299 1 1758 179 10 17 chr2 40803752 40804053 -209883801 + AluJb SINE Alu 1 299 -13 213 264 57 0 chr2 40804055 40804108 -209883746 - L3 LINE CR1 -8 1569 1514 267 241 0 0 chr2 40804108 40804162 -209883692 - MLT1H1 LTR MaLR 0 555 502 183 152 0 0 chr2 40804181 40804227 -209883627 + T-rich Low_complexity Low_complexity 1 46 0 3580 39 2 0 chr2 40804230 40804636 -209883218 - L1PA3 LINE L1 -3 6152 5746 597 198 114 28 chr2 40804769 40805009 -209882845 - MLT1H LTR MaLR -263 292 17 231 288 76 0 chr2 40805641 40805707 -209882147 + MER5A DNA MER1_type 119 189 0 1378 143 13 67 chr2 40805879 40806179 -209881675 - L1MB8 LINE L1 0 6178 5895 403 293 136 7 chr2 40806765 40806905 -209880949 - MIR3 SINE MIR -9 199 42 2244 120 7 0 chr2 40807133 40807441 -209880413 - AluSx SINE Alu -2 310 1 835 166 183 0 chr2 40807461 40807630 -209880224 - MER3 DNA MER1_type -4 205 6 508 281 91 41 chr2 40807639 40807860 -209879994 + MIR SINE MIR 29 260 -2 2236 116 6 3 chr2 40807896 40808207 -209879647 + AluSx SINE Alu 1 312 0 365 306 30 55 chr2 40809130 40809170 -209878684 + MIR3 SINE MIR 6 45 -163 1792 141 10 52 chr2 40809170 40809475 -209878379 - AluJo SINE Alu -20 292 1 365 306 30 55 chr2 40809475 40809633 -209878221 + MIR3 SINE MIR 45 199 -9 842 189 38 16 chr2 40809685 40809870 -209877984 + MER53 DNA DNA 1 189 0 411 318 64 92 chr2 40811039 40811210 -209876644 + L2 LINE L2 2817 2991 -281 2415 86 0 3 chr2 40811210 40811512 -209876342 - AluSp SINE Alu -12 301 1 411 318 64 92 chr2 40811512 40811808 -209876046 + L2 LINE L2 2991 3271 -1 571 253 69 17 chr2 40812405 40812579 -209875275 + MIR3 SINE MIR 20 202 -6 4905 202 51 95 chr2 40812591 40813658 -209874196 + MER69 DNA AcHobo 1 988 -1538 2190 133 0 0 chr2 40813658 40813967 -209873887 - AluSg SINE Alu -1 309 1 4905 202 51 95 chr2 40813967 40814356 -209873498 + MER69 DNA AcHobo 988 1393 -1133 1584 215 102 24 chr2 40814372 40814912 -209872942 + MER69 DNA AcHobo 1945 2526 0 453 196 399 0 chr2 40814926 40815059 -209872795 - MER5A DNA MER1_type 0 189 4 308 301 98 24 chr2 40815070 40815193 -209872661 - MER5A DNA MER1_type 0 189 58 421 228 0 0 chr2 40815203 40815282 -209872572 + L1ME LINE L1 5510 5588 -2220 284 191 85 64 chr2 40815297 40815391 -209872463 - LTR50 LTR ERVL -675 120 25 328 325 64 0 chr2 40815403 40815582 -209872272 + L1ME LINE L1 5600 5796 -325 2445 52 0 52 chr2 40815885 40816213 -209871641 + AluY SINE Alu 1 311 0 441 240 32 81 chr2 40816578 40816799 -209871055 - L1MC4 LINE L1 -2 8040 7831 3113 203 41 26 chr2 40816846 40817579 -209870275 - L1ME2 LINE L1 -10 6154 5411 23 0 0 0 chr2 40817600 40817623 -209870231 + AT_rich Low_complexity Low_complexity 1 23 0 3750 259 124 26 chr2 40817630 40819068 -209868786 - L1MC4 LINE L1 -3 8039 6460 688 268 32 5 chr2 40820201 40820391 -209867463 + MER117 DNA MER1_type 2 196 -1 338 281 62 25 chr2 40820575 40820735 -209867119 - MIR SINE MIR -6 256 91 397 284 71 30 chr2 40820789 40820958 -209866896 + MER5B DNA MER1_type 1 176 -2 270 357 136 14 chr2 40820981 40821194 -209866660 - MIR SINE MIR -4 258 20 294 311 25 33 chr2 40821692 40821814 -209866040 - L3 LINE CR1 -9 1568 1448 1981 93 0 19 chr2 40821816 40822084 -209865770 + AluSc SINE Alu 42 304 -5 539 231 37 0 chr2 40824774 40824882 -209862972 - MER81 DNA DNA -2 112 1 801 112 0 0 chr2 40825340 40825447 -209862407 - AluSg/x SINE Alu -13 296 190 386 312 40 8 chr2 40878608 40878733 -209809121 + L2 LINE L2 2229 2357 -957 249 348 37 14 chr2 40878787 40878988 -209808866 + L2 LINE L2 2211 2472 -842 228 337 186 12 chr2 40879090 40879262 -209808592 + L2 LINE L2 2691 2892 -422 244 343 79 28 chr2 40879319 40879497 -209808357 + L2 LINE L2 2837 3023 -249 523 286 161 14 chr2 40879620 40879837 -209808017 - MIR SINE MIR -13 249 1 28 107 0 0 chr2 40880372 40880484 -209807370 + AT_rich Low_complexity Low_complexity 1 112 0 2157 123 0 0 chr2 40880560 40880853 -209807001 - AluSg SINE Alu -15 295 3 36 53 0 0 chr2 40880903 40880960 -209806894 + AT_rich Low_complexity Low_complexity 1 57 0 2818 3 0 0 chr2 40882720 40883023 -209804831 + AluYa5 SINE Alu 1 303 -8 2025 109 4 0 chr2 40884817 40885083 -209802771 + AluSx SINE Alu 1 267 -45 298 356 11 23 chr2 40887125 40887302 -209800552 - MIR SINE MIR 0 262 88 305 149 35 0 chr2 40888927 40889041 -209798813 + (TA)n Simple_repeat Simple_repeat 2 119 0 3179 144 40 62 chr2 40889297 40889915 -209797939 + MER6A DNA MER2_type 1 605 0 1481 211 14 11 chr2 40890395 40890674 -209797180 + AluJb SINE Alu 1 280 -32 2144 90 47 17 chr2 40890885 40891184 -209796670 + AluSx SINE Alu 1 308 -4 521 93 9 75 chr2 40891673 40891780 -209796074 + L1MC5 LINE L1 7300 7399 -562 2303 95 10 0 chr2 40891792 40892088 -209795766 - AluSx SINE Alu -13 299 1 288 286 20 41 chr2 40892257 40892355 -209795499 + MER5A DNA MER1_type 92 187 -2 465 348 82 10 chr2 40892526 40892733 -209795121 - MIR SINE MIR -17 245 24 276 265 129 30 chr2 40892852 40892984 -209794870 + MIR SINE MIR 117 261 -1 327 313 40 27 chr2 40893136 40893286 -209794568 - L3b LINE CR1 -174 1409 1258 830 250 42 24 chr2 40893426 40893638 -209794216 + MIR SINE MIR 46 261 -1 238 273 0 39 chr2 40894047 40894124 -209793730 - MIR SINE MIR -44 218 145 444 123 0 0 chr2 40894734 40894807 -209793047 + (GGGAGA)n Simple_repeat Simple_repeat 1 73 0 465 201 157 30 chr2 40894896 40895030 -209792824 - MIR3 SINE MIR -14 194 44 222 200 0 0 chr2 40895539 40895584 -209792270 + C-rich Low_complexity Low_complexity 4 48 0 1963 117 0 0 chr2 40895681 40895962 -209791892 - AluJb SINE Alu -11 301 21 203 349 110 7 chr2 40897760 40897906 -209789948 + L2 LINE L2 2898 3058 -214 2006 119 154 5 chr2 40898226 40898596 -209789258 - MSTA LTR MaLR -2 426 2 504 48 0 0 chr2 40898949 40899012 -209788842 + (CA)n Simple_repeat Simple_repeat 1 63 0 281 233 17 0 chr2 40899019 40899079 -209788775 + LTR67 LTR ERVL 497 557 0 24 53 0 0 chr2 40900649 40900687 -209787167 + AT_rich Low_complexity Low_complexity 1 38 0 1908 119 11 0 chr2 40901853 40902114 -209785740 + AluSx SINE Alu 29 292 -20 6127 146 43 52 chr2 40902605 40903505 -209784349 + Tigger3b DNA MER2_type 2 889 -2139 221 57 29 0 chr2 40903505 40903540 -209784314 + (CTCA)n Simple_repeat Simple_repeat 3 38 0 6127 146 43 52 chr2 40903540 40903880 -209783974 + Tigger3b DNA MER2_type 889 1231 0 21 71 0 0 chr2 40904193 40904235 -209783619 + AT_rich Low_complexity Low_complexity 1 42 0 2374 90 3 0 chr2 40904235 40904536 -209783318 - AluSp SINE Alu -11 302 1 291 222 80 108 chr2 40904562 40904738 -209783116 + L3b LINE CR1 1115 1285 -298 933 130 35 75 chr2 40905091 40905138 -209782716 - L1MB2 LINE L1 0 6171 6124 2134 111 7 7 chr2 40905138 40905436 -209782418 - AluSq SINE Alu -15 298 1 933 130 35 75 chr2 40905436 40905506 -209782348 - L1MB2 LINE L1 -47 6124 6053 5511 154 20 34 chr2 40905506 40906592 -209781262 - MER11C LTR ERVK 0 1071 1 933 130 35 75 chr2 40906592 40906673 -209781181 - L1MB2 LINE L1 -118 6053 5980 224 261 174 0 chr2 40906739 40906808 -209781046 + L2 LINE L2 3230 3310 -3 657 153 0 3 chr2 40906842 40906954 -209780900 - LTR12 LTR ERV1 0 714 175 275 231 44 33 chr2 40906956 40907047 -209780807 - LTR30 LTR ERV1 -79 643 552 312 133 93 13 chr2 40907047 40907122 -209780732 - LTR12 LTR ERV1 -429 285 205 1276 130 88 5 chr2 40907161 40907377 -209780477 - LTR12 LTR ERV1 -480 234 1 475 256 26 0 chr2 40907525 40907642 -209780212 - MER5B DNA MER1_type -19 159 40 280 278 117 39 chr2 40907719 40907899 -209779955 + MLT1L LTR MaLR 198 391 -224 183 80 0 0 chr2 40907912 40907937 -209779917 + (A)n Simple_repeat Simple_repeat 1 25 0 430 240 67 101 chr2 40908393 40908601 -209779253 - L2 LINE L2 0 3313 3113 212 311 33 0 chr2 40909049 40909110 -209778744 - L2 LINE L2 -50 3263 3201 2686 96 64 10 chr2 40910900 40911306 -209776548 - MSTA LTR MaLR 0 428 1 1613 105 26 4 chr2 40911590 40912030 -209775824 + LTR54 LTR ERV1 1 510 0 633 299 4 58 chr2 40912573 40912834 -209775020 - MIR SINE MIR -13 249 3 7322 48 0 0 chr2 40912982 40914024 -209773830 - L1PA6 LINE L1 -2 6152 5111 893 238 84 0 chr2 40914270 40914472 -209773382 - MER58A DNA MER1_type 0 224 6 1290 172 109 8 chr2 40914506 40914744 -209773110 + MER1B DNA MER1_type 1 262 -77 441 180 180 0 chr2 40914744 40914844 -209773010 + MIR SINE MIR 28 145 -117 561 278 69 60 chr2 40915088 40915524 -209772330 - HAL1 LINE L1 -838 1669 1230 241 308 145 31 chr2 40916846 40917005 -209770849 + L3b LINE CR1 1388 1564 -19 2126 153 71 5 chr2 40917564 40917957 -209769897 - MSTB LTR MaLR 0 426 8 425 164 15 0 chr2 40918060 40918127 -209769727 - Alu SINE Alu -26 284 217 749 273 110 57 chr2 40918239 40918283 -209769571 - L1MDa LINE L1 -4136 2174 2134 1711 139 17 28 chr2 40918283 40918571 -209769283 + AluSx SINE Alu 1 285 -27 201 74 0 0 chr2 40918571 40918598 -209769256 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 749 273 110 57 chr2 40918598 40919779 -209768075 - L1MDa LINE L1 -4176 2134 844 10585 204 24 11 chr2 40919779 40923072 -209764782 - L1PA15 LINE L1 -3 6813 3460 749 273 110 57 chr2 40923072 40923091 -209764763 - L1MDa LINE L1 -5466 844 827 28906 113 11 55 chr2 40923106 40929529 -209758325 - L1PA7 LINE L1 -11 6143 13 3799 239 43 29 chr2 40929542 40930461 -209757393 - L1PA15 LINE L1 -3325 3472 2568 2235 130 0 13 chr2 40930461 40930777 -209757077 + AluSx SINE Alu 1 312 0 3799 239 43 29 chr2 40930777 40930871 -209756983 - L1PA15 LINE L1 -4229 2568 2477 2876 102 18 27 chr2 40930871 40931310 -209756544 + L1PA11 LINE L1 5739 6173 -1 3799 239 43 29 chr2 40931310 40932548 -209755306 - L1PA15 LINE L1 -4320 2477 1185 400 367 45 45 chr2 40932647 40933023 -209754831 - L1MDa LINE L1 -5295 824 449 496 321 141 12 chr2 40933680 40934007 -209753847 - L2 LINE L2 -1348 1966 1598 1691 200 25 28 chr2 40934137 40934492 -209753362 - MLT1A1 LTR MaLR 0 365 12 2240 112 0 0 chr2 40935087 40935383 -209752471 + AluSq SINE Alu 1 296 -17 387 0 0 0 chr2 40935395 40935438 -209752416 + (TA)n Simple_repeat Simple_repeat 2 44 0 808 250 126 32 chr2 40935751 40935908 -209751946 + HsTC2 DNA Tc2 1161 1302 -596 1009 202 0 6 chr2 40935908 40936081 -209751773 - FAM SINE Alu -3 172 1 808 250 126 32 chr2 40936081 40936303 -209751551 + HsTC2 DNA Tc2 1302 1752 -146 668 242 102 9 chr2 40936368 40936583 -209751271 - L1MC/D LINE L1 -1992 5816 5582 909 266 31 12 chr2 40938224 40938396 -209749458 + MIR SINE MIR 2 182 -80 1358 198 39 94 chr2 40938396 40938780 -209749074 - MLT1A1 LTR MaLR -2 363 1 909 266 31 12 chr2 40938780 40938863 -209748991 + MIR SINE MIR 182 262 0 269 271 28 21 chr2 40938934 40939078 -209748776 + GA-rich Low_complexity Low_complexity 3 147 0 5426 125 37 13 chr2 40939397 40940377 -209747477 - L1MA8 LINE L1 -6 6285 5290 28645 118 11 56 chr2 40940390 40946826 -209741028 - L1PA7 LINE L1 -4 6150 13 12854 187 27 15 chr2 40946836 40949843 -209738011 - L1M1 LINE L1 -813 6752 3710 7938 229 34 12 chr2 40949839 40952502 -209735352 - L1 LINE L1 -1779 5069 2347 * 3333 205 78 14 chr2 40952520 40952532 -209735322 - L1PBb LINE L1 -4706 2142 2132 2185 140 0 13 chr2 40952532 40952846 -209735008 - AluSx SINE Alu -2 310 1 3333 205 78 14 chr2 40952846 40953728 -209734126 - L1PBb LINE L1 -4716 2132 1098 492 281 42 35 chr2 40953990 40954250 -209733604 - L1PBb LINE L1 -5792 1057 796 310 342 0 0 chr2 40954255 40954334 -209733520 - L1PBb LINE L1 -6353 496 418 * 417 282 21 70 chr2 40954318 40954460 -209733394 - L1 LINE L1 -6018 831 697 276 30 0 0 chr2 40955175 40955208 -209732646 + (TG)n Simple_repeat Simple_repeat 1 33 0 782 304 18 11 chr2 40955209 40955489 -209732365 - L1PBb LINE L1 -6558 291 10 906 218 75 77 chr2 40955498 40955979 -209731875 - L1M1 LINE L1 -3956 3609 3130 731 298 99 66 chr2 40956121 40956501 -209731353 - L1ME2 LINE L1 -283 5881 5472 2454 62 0 3 chr2 40956501 40956805 -209731049 - AluY SINE Alu -8 303 1 731 298 99 66 chr2 40956805 40957028 -209730826 - L1ME2 LINE L1 -692 5472 5258 385 195 0 35 chr2 40957347 40957460 -209730394 + (TA)n Simple_repeat Simple_repeat 1 109 0 1890 132 33 36 chr2 40957460 40957764 -209730090 - AluJb SINE Alu -8 304 2 198 0 0 0 chr2 40957964 40957986 -209729868 + (GA)n Simple_repeat Simple_repeat 2 23 0 322 225 14 14 chr2 40958998 40959069 -209728785 + L2 LINE L2 3239 3309 -4 297 0 0 0 chr2 40959276 40959309 -209728545 + (TA)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr2 40959309 40959330 -209728524 + (T)n Simple_repeat Simple_repeat 1 21 0 30 27 0 0 chr2 40959563 40959600 -209728254 + AT_rich Low_complexity Low_complexity 1 37 0 2070 159 43 66 chr2 40959858 40960375 -209727479 - MLT1D LTR MaLR 0 505 1 2075 118 70 17 chr2 40960439 40960795 -209727059 + THE1C LTR MaLR 1 375 0 303 113 0 0 chr2 40961338 40961391 -209726463 + (TG)n Simple_repeat Simple_repeat 2 54 0 183 156 0 0 chr2 40962211 40962243 -209725611 + T-rich Low_complexity Low_complexity 2 33 0 383 260 169 32 chr2 40963136 40963290 -209724564 - MER5A DNA MER1_type -6 183 9 2419 73 0 3 chr2 40963642 40963967 -209723887 - AluSg SINE Alu 0 334 11 279 232 162 10 chr2 40964563 40964662 -209723192 - L2 LINE L2 -8 3305 3192 202 283 0 0 chr2 40965075 40965128 -209722726 + L2 LINE L2 2313 2365 -949 427 111 0 0 chr2 40965135 40965207 -209722647 - L1MB2 LINE L1 -211 5960 5889 27 49 0 0 chr2 40965254 40965295 -209722559 + AT_rich Low_complexity Low_complexity 1 41 0 1531 189 7 46 chr2 40965329 40965635 -209722219 - AluJb SINE Alu -12 300 7 385 307 146 28 chr2 40965678 40965890 -209721964 - L2 LINE L2 -704 2610 2374 214 171 37 37 chr2 40965934 40966016 -209721838 + (TATAA)n Simple_repeat Simple_repeat 4 85 0 444 294 123 25 chr2 40966021 40966378 -209721476 + L1ME LINE L1 5311 5702 -419 263 330 47 0 chr2 40968301 40968407 -209719447 + MIR3 SINE MIR 70 180 -28 200 159 0 23 chr2 40968658 40968702 -209719152 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 204 40 0 0 chr2 40968702 40968727 -209719127 + (CA)n Simple_repeat Simple_repeat 2 26 0 733 192 0 15 chr2 40968731 40968861 -209718993 - FLAM_A SINE Alu -5 128 1 269 113 72 201 chr2 40969267 40969461 -209718393 - MER53 DNA DNA -20 169 1 232 265 99 37 chr2 40969728 40969890 -209717964 - L1ME LINE L1 -342 5779 5608 186 167 0 0 chr2 40970621 40970657 -209717197 + A-rich Low_complexity Low_complexity 2 37 0 438 179 104 37 chr2 40971086 40971220 -209716634 - MER103 DNA DNA -8 158 16 807 180 160 16 chr2 40972385 40972579 -209715275 - MER58A DNA MER1_type -2 222 1 685 276 38 66 chr2 40972840 40973194 -209714660 + L1MEc LINE L1 1896 2258 -3957 476 75 25 25 chr2 40973194 40973274 -209714580 + MADE1 DNA Mariner 1 80 0 685 276 38 66 chr2 40973274 40973717 -209714137 + L1MEc LINE L1 2258 2644 -3571 346 279 150 13 chr2 40973817 40974108 -209713746 + L3 LINE CR1 436 829 -748 658 212 92 102 chr2 40974163 40974335 -209713519 - L1ME3 LINE L1 -21 6141 5972 3689 191 97 16 chr2 40974335 40975130 -209712724 - MER21B LTR ERV1 0 863 5 658 212 92 102 chr2 40975130 40975240 -209712614 - L1ME3 LINE L1 -190 5972 5862 695 242 213 2 chr2 40975260 40975702 -209712152 - L1ME3 LINE L1 -1538 4608 4074 3258 170 39 8 chr2 40975745 40976332 -209711522 - MER6A DNA MER2_type 0 605 1 504 330 121 59 chr2 40976456 40976639 -209711215 + L3 LINE CR1 1001 1171 -406 1321 151 29 129 chr2 40976639 40977013 -209710841 + THE1C LTR MaLR 1 330 -45 2051 128 14 7 chr2 40977013 40977310 -209710544 - AluSq SINE Alu -14 299 1 1321 151 29 129 chr2 40977310 40977352 -209710502 + THE1C LTR MaLR 330 375 0 504 330 121 59 chr2 40977352 40977707 -209710147 + L3 LINE CR1 1171 1572 -5 661 279 31 22 chr2 40978004 40978230 -209709624 + MIR SINE MIR 6 233 -29 2075 138 42 17 chr2 40978245 40978600 -209709254 + THE1B LTR MaLR 1 364 0 7503 179 84 5 chr2 40978602 40980131 -209707723 + THE1B-int LTR MaLR 3 1651 0 2379 114 31 17 chr2 40980131 40980490 -209707364 + THE1B LTR MaLR 1 364 0 417 86 0 0 chr2 40980945 40981003 -209706851 + (CA)n Simple_repeat Simple_repeat 1 58 0 2600 176 17 0 chr2 40981726 40982186 -209705668 + MER70B LTR ERVL 1 468 -110 25 0 0 0 chr2 40983153 40983178 -209704676 + AT_rich Low_complexity Low_complexity 1 25 0 237 256 0 0 chr2 40983609 40983691 -209704163 + (TA)n Simple_repeat Simple_repeat 1 82 0 323 375 72 16 chr2 40983807 40984058 -209703796 + HAL1b LINE L1 221 485 -863 303 280 83 61 chr2 40984540 40984672 -209703182 + L2 LINE L2 2847 2981 -291 394 262 25 99 chr2 40984679 40984881 -209702973 + L2 LINE L2 3085 3271 -1 375 316 72 34 chr2 40987625 40987744 -209700110 + L1ME4a LINE L1 5635 5748 -373 495 0 0 0 chr2 40987744 40987799 -209700055 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2116 92 14 11 chr2 40987801 40988084 -209699770 - AluSp SINE Alu -29 284 1 375 316 72 34 chr2 40988084 40988224 -209699630 + L1ME4a LINE L1 5748 5907 -214 372 205 17 17 chr2 40988438 40988555 -209699299 + CT-rich Low_complexity Low_complexity 2 118 0 866 206 0 26 chr2 40988700 40988894 -209698960 - MER5A DNA MER1_type 0 189 1 326 319 5 69 chr2 40989686 40989874 -209697980 - MIR SINE MIR -79 183 8 561 68 0 0 chr2 40990027 40990101 -209697753 + (TA)n Simple_repeat Simple_repeat 2 75 0 2230 112 0 0 chr2 40990101 40990397 -209697457 - AluSq SINE Alu -17 296 1 1335 236 47 25 chr2 40991243 40991646 -209696208 - MER92A LTR ERV1 0 412 1 266 253 179 11 chr2 40991723 40991818 -209696036 + MER5A DNA MER1_type 73 183 -6 437 286 75 12 chr2 40991844 40992005 -209695849 + MIR SINE MIR 37 207 -55 2110 130 0 3 chr2 40992123 40992424 -209695430 - AluSx SINE Alu -1 311 12 7192 110 26 3 chr2 40992463 40993600 -209694254 - L1PA8A LINE L1 -1341 4805 3639 6179 79 3 32 chr2 40993600 40994945 -209692909 + L1PA8A LINE L1 4809 6130 -1 7192 110 26 3 chr2 40994945 40994956 -209692898 - L1P LINE L1 -2507 3639 3630 214 250 29 29 chr2 40995658 40995726 -209692128 + CT-rich Low_complexity Low_complexity 2 69 0 1868 201 81 0 chr2 40996155 40996549 -209691305 + L1MB5 LINE L1 5697 6122 -52 1826 154 74 3 chr2 40997072 40997396 -209690458 - MER7A DNA MER2_type 0 346 2 563 307 80 0 chr2 40998558 40998734 -209689120 + MIR SINE MIR 4 193 -69 237 222 48 0 chr2 40999335 40999398 -209688456 - MER45 DNA AcHobo 0 1581 1516 415 311 102 0 chr2 41001252 41001429 -209686425 - MIR SINE MIR -14 248 54 808 307 75 50 chr2 41001563 41002042 -209685812 + MLT1K LTR MaLR 13 503 -85 199 128 51 0 chr2 41002457 41002496 -209685358 - L2 LINE L2 0 3313 3273 222 235 39 0 chr2 41002576 41002627 -209685227 - L2 LINE L2 -325 2988 2936 642 242 0 0 chr2 41003098 41003222 -209684632 - MIR SINE MIR -79 183 60 444 331 45 113 chr2 41003870 41004425 -209683429 - L3 LINE CR1 -11 1566 1050 200 231 0 0 chr2 41004885 41004924 -209682930 + CT-rich Low_complexity Low_complexity 2 40 0 1070 176 4 64 chr2 41007016 41007249 -209680605 - MER20 DNA MER1_type 0 219 1 203 179 161 0 chr2 41007776 41007832 -209680022 - L2 LINE L2 -15 3298 3234 319 312 130 33 chr2 41008653 41008868 -209678986 - MIR SINE MIR -7 255 20 217 363 56 12 chr2 41009136 41009296 -209678558 + MIR SINE MIR 93 259 -3 203 77 0 26 chr2 41010109 41010148 -209677706 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 273 242 316 0 chr2 41010318 41010413 -209677441 + MIR SINE MIR 21 146 -62 284 260 27 0 chr2 41010722 41010795 -209677059 - MIR SINE MIR -27 235 161 710 309 31 0 chr2 41010937 41011128 -209676726 - MIR SINE MIR -21 241 45 204 312 225 0 chr2 41011724 41011862 -209675992 + MIR3 SINE MIR 10 178 -30 21 0 0 0 chr2 41012671 41012692 -209675162 + AT_rich Low_complexity Low_complexity 1 21 0 3671 150 24 43 chr2 41012961 41013702 -209674152 - L1MB2 LINE L1 -1 6170 5444 2753 217 78 24 chr2 41013848 41014593 -209673261 - MER21B LTR ERV1 -60 803 19 261 190 25 149 chr2 41014591 41014712 -209673142 - MER21B LTR ERV1 -757 106 1 * 2268 129 15 0 chr2 41014776 41015108 -209672746 + MER1B DNA MER1_type 1 337 0 203 258 34 34 chr2 41015358 41015447 -209672407 + (GGATG)n Simple_repeat Simple_repeat 1 89 0 1785 146 113 40 chr2 41015659 41016056 -209671798 + MSTA LTR MaLR 3 428 0 793 172 0 0 chr2 41017256 41017384 -209670470 + FLAM_C SINE Alu 5 132 -1 232 333 17 23 chr2 41021789 41021966 -209665888 - HAL1 LINE L1 -838 1669 1494 433 268 96 122 chr2 41022019 41022583 -209665271 - L1MDa LINE L1 -1160 1741 1228 24 53 0 0 chr2 41023564 41023602 -209664252 + AT_rich Low_complexity Low_complexity 1 38 0 282 367 48 20 chr2 41023747 41023894 -209663960 + L2 LINE L2 3122 3272 0 1449 271 89 34 chr2 41024035 41024531 -209663323 - MLT1E LTR MaLR 0 593 61 2003 138 59 8 chr2 41024531 41024887 -209662967 + THE1C LTR MaLR 2 375 0 1449 271 89 34 chr2 41024887 41024952 -209662902 - MLT1E LTR MaLR -532 61 1 402 270 49 54 chr2 41024953 41025138 -209662716 + MIR SINE MIR 78 261 -1 186 254 237 61 chr2 41025452 41025566 -209662288 + MIR3 SINE MIR 50 183 -25 388 335 87 14 chr2 41026121 41026408 -209661446 - MARNA DNA Mariner -133 453 146 394 115 64 0 chr2 41026466 41026544 -209661310 + L1PA13 LINE L1 6081 6163 0 327 250 76 0 chr2 41026605 41026697 -209661157 + MIR SINE MIR 53 151 -111 370 312 55 60 chr2 41026934 41027152 -209660702 - MIR SINE MIR -44 218 2 441 264 51 90 chr2 41027214 41027392 -209660462 + MER5B DNA MER1_type 1 171 -7 232 364 68 0 chr2 41027449 41027537 -209660317 + MIR SINE MIR 30 123 -85 182 250 120 65 chr2 41028589 41028697 -209659157 - MIR SINE MIR -132 130 17 5487 109 42 22 chr2 41030134 41031244 -209656610 - L1MA4A LINE L1 -7 6998 5861 735 183 15 0 chr2 41031248 41031379 -209656475 - FRAM SINE Alu -15 161 29 10609 169 43 28 chr2 41031381 41031531 -209656323 - L1MA4A LINE L1 -983 5865 5719 2017 138 6 13 chr2 41031531 41031843 -209656011 - AluSx SINE Alu -2 310 1 10609 169 43 28 chr2 41031843 41032766 -209655088 - L1MA4A LINE L1 -1129 5719 4811 1812 123 54 48 chr2 41032766 41033139 -209654715 + THE1C LTR MaLR 1 375 0 10609 169 43 28 chr2 41033139 41034556 -209653298 - L1MA4A LINE L1 -2037 4811 3337 8291 173 47 72 chr2 41034554 41036541 -209651313 - L1MA4A LINE L1 -4911 1938 2 * 1315 205 105 26 chr2 41036577 41036997 -209650857 - L1MDa LINE L1 -4516 2024 1572 272 296 96 30 chr2 41037136 41037271 -209650583 + MIR3 SINE MIR 21 164 -44 733 274 102 52 chr2 41039133 41039709 -209648145 - HAL1 LINE L1 -1367 1140 536 305 245 53 0 chr2 41039779 41039873 -209647981 - HAL1 LINE L1 -2408 99 1 367 260 0 60 chr2 41042362 41042462 -209645392 + L2 LINE L2 3220 3313 0 324 326 96 16 chr2 41042687 41042874 -209644980 - MIR SINE MIR -27 235 34 260 292 11 56 chr2 41043254 41043343 -209644511 - L2 LINE L2 -18 3254 3170 285 301 97 80 chr2 41043442 41043731 -209644123 + L2 LINE L2 2812 3105 -167 500 271 77 50 chr2 41046551 41046691 -209641163 - MLT1K LTR MaLR -252 336 186 1359 180 65 45 chr2 41046691 41047047 -209640807 - MLT1A1 LTR MaLR -2 363 1 500 271 77 50 chr2 41047047 41047127 -209640727 - MLT1K LTR MaLR -402 186 110 197 349 35 12 chr2 41047602 41047688 -209640166 - MIR SINE MIR -114 148 61 321 227 109 11 chr2 41048042 41048219 -209639635 - L1ME4a LINE L1 -236 5885 5691 866 294 99 51 chr2 41048499 41048992 -209638862 + MLT1H LTR MaLR 18 534 -15 264 399 6 39 chr2 41049219 41049397 -209638457 + MIR3 SINE MIR 1 172 -36 * 302 243 0 14 chr2 41049382 41049456 -209638398 - MIR SINE MIR 0 262 190 1750 254 91 22 chr2 41050005 41050835 -209637019 + L1ME3A LINE L1 5122 6011 -159 4270 206 28 13 chr2 41051015 41052108 -209635746 + L1P LINE L1 4254 5363 -783 391 273 22 14 chr2 41052122 41052261 -209635593 - L1ME3A LINE L1 -159 6011 5872 3799 112 105 7 chr2 41052261 41052975 -209634879 + L1PA16 LINE L1 5381 6164 -2 206 309 203 16 chr2 41054047 41054170 -209633684 - MIR3 SINE MIR -49 159 14 422 283 164 31 chr2 41054422 41054581 -209633273 - MER5A DNA MER1_type -1 188 9 538 248 32 11 chr2 41054586 41054747 -209633107 - MLT1A1 LTR MaLR -2 426 221 390 214 0 94 chr2 41054889 41055006 -209632848 - MLT1A1 LTR MaLR -259 106 1 7877 191 69 17 chr2 41055007 41056655 -209631199 - MLT1A1-int LTR MaLR -1 1734 1 1691 207 8 32 chr2 41056655 41057025 -209630829 - MLT1A1 LTR MaLR -2 363 1 1147 315 50 23 chr2 41057277 41057997 -209629857 - L2 LINE L2 -1 3312 2574 506 264 112 6 chr2 41058426 41058604 -209629250 - MER117 DNA MER1_type 0 197 1 645 267 81 38 chr2 41058652 41058888 -209628966 + MIR SINE MIR 5 250 -12 270 0 0 0 chr2 41058994 41059024 -209628830 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 2066 122 0 0 chr2 41059411 41059697 -209628157 - AluSx SINE Alu 0 312 27 254 73 24 0 chr2 41060243 41060284 -209627570 + (CA)n Simple_repeat Simple_repeat 2 43 0 339 292 49 14 chr2 41060504 41060648 -209627206 - L1MEc LINE L1 -4850 1460 1312 1056 258 87 95 chr2 41060662 41061908 -209625946 - L1MEc LINE L1 -4862 1257 22 355 367 33 70 chr2 41061940 41062240 -209625614 - L2 LINE L2 -18 3254 2966 996 306 21 24 chr2 41062420 41062796 -209625058 - LTR16B LTR ERVL -13 451 77 186 65 97 0 chr2 41065030 41065092 -209622762 + (TA)n Simple_repeat Simple_repeat 1 68 0 195 184 0 0 chr2 41065718 41065756 -209622098 + (TA)n Simple_repeat Simple_repeat 1 38 0 226 208 17 110 chr2 41065793 41065966 -209621888 + L1 LINE L1 2242 2398 -3748 2038 129 0 0 chr2 41066097 41066377 -209621477 + AluSg SINE Alu 1 280 -30 334 289 69 37 chr2 41066384 41066602 -209621252 + L1MC4a LINE L1 2505 2729 -3417 297 0 0 0 chr2 41066608 41066641 -209621213 + (CA)n Simple_repeat Simple_repeat 2 34 0 294 284 121 26 chr2 41066838 41067302 -209620552 + L1MC4a LINE L1 4890 5397 -749 2374 83 0 16 chr2 41067325 41067639 -209620215 - AluY SINE Alu -2 309 1 939 226 21 24 chr2 41067659 41067701 -209620153 + L1MC4a LINE L1 5722 5763 -2045 920 216 98 77 chr2 41067701 41068089 -209619765 + MSTD LTR MaLR 1 396 0 939 226 21 24 chr2 41068089 41068333 -209619521 + L1MC4a LINE L1 5763 6007 -1801 325 358 66 0 chr2 41069018 41069155 -209618699 + MIR SINE MIR 47 192 -70 215 278 87 48 chr2 41070371 41070497 -209617357 + MIR SINE MIR 99 229 -33 444 273 16 76 chr2 41070688 41070937 -209616917 - MER112 DNA MER1_type -6 254 21 221 328 38 23 chr2 41070983 41071114 -209616740 + L2 LINE L2 2230 2362 -952 22 35 0 0 chr2 41071139 41071168 -209616686 + AT_rich Low_complexity Low_complexity 1 29 0 399 323 75 1 chr2 41071592 41071732 -209616122 - MIR3 SINE MIR -26 182 30 1053 124 0 0 chr2 41072461 41072606 -209615248 - AluSg/x SINE Alu -4 308 164 224 213 66 49 chr2 41073446 41073507 -209614347 - L2 LINE L2 -7 3265 3204 262 254 0 0 chr2 41073554 41073609 -209614245 - L2 LINE L2 -3 3269 3215 1789 107 8 0 chr2 41073632 41073876 -209613978 - MLT2A2 LTR ERVL -207 246 1 41185 92 15 3 chr2 41073876 41079339 -209608515 - HERVL-A2-A2 LTR ERVL 0 5654 124 2053 104 0 17 chr2 41079337 41079624 -209608230 + HERVL LTR ERVL 779 1060 -4594 * 938 92 0 0 chr2 41079621 41079752 -209608102 - HERVL-A2-A2 LTR ERVL -5523 131 1 * 2318 141 62 33 chr2 41079752 41079773 -209608081 - MLT2A2 LTR ERVL 0 554 535 3119 174 20 63 chr2 41079773 41080412 -209607442 - LTR9 LTR ERV1 0 612 1 2318 141 62 33 chr2 41080412 41080901 -209606953 - MLT2A2 LTR ERVL -19 535 3 1009 197 67 0 chr2 41080986 41081179 -209606675 - MER58A DNA MER1_type -9 215 10 225 163 93 0 chr2 41081401 41081444 -209606410 - MLT1L LTR MaLR -354 261 215 210 383 17 0 chr2 41081574 41081634 -209606220 - L2 LINE L2 -90 3182 3122 2049 128 7 7 chr2 41082025 41082323 -209605531 + AluSx SINE Alu 1 298 -14 323 287 54 24 chr2 41083049 41083216 -209604638 - L1ME4a LINE L1 -258 5863 5692 1149 260 29 55 chr2 41083237 41083750 -209604104 + MLT1G1 LTR MaLR 1 595 0 531 276 72 17 chr2 41083750 41083931 -209603923 - L1ME4a LINE L1 -451 5670 5480 275 261 92 17 chr2 41084674 41084793 -209603061 - L1ME4a LINE L1 -72 6049 5922 331 282 80 12 chr2 41084913 41085076 -209602778 - L1ME4a LINE L1 -373 5748 5575 525 232 74 20 chr2 41085723 41085874 -209601980 - MER5A DNA MER1_type -11 167 20 668 265 172 51 chr2 41085889 41086280 -209601574 + LTR16A LTR ERVL 17 448 -2 366 357 57 6 chr2 41086790 41086947 -209600907 + MIR SINE MIR 2 166 -96 731 193 114 50 chr2 41087013 41087215 -209600639 - MIR SINE MIR 0 262 48 965 142 60 16 chr2 41087386 41087569 -209600285 + L1MA8 LINE L1 5949 6139 -152 10823 45 3 0 chr2 41087577 41089597 -209598257 - L1PA4 LINE L1 -3 6152 4128 7573 33 3 0 chr2 41089597 41090496 -209597358 + L1PA4 LINE L1 3229 4130 -2016 887 131 46 7 chr2 41090496 41090643 -209597211 + L1MA8 LINE L1 6127 6285 -6 183 167 0 0 chr2 41091678 41091720 -209596134 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 400 308 95 6 chr2 41092506 41092675 -209595179 - L2 LINE L2 -426 2888 2705 403 275 142 69 chr2 41092879 41093112 -209594742 - MIR SINE MIR -11 251 2 190 195 65 65 chr2 41093167 41093244 -209594610 - MIR SINE MIR -63 145 69 984 159 7 4 chr2 41093957 41094235 -209593619 + (TA)n Simple_repeat Simple_repeat 1 279 0 301 171 32 8 chr2 41094296 41094419 -209593435 + (TA)n Simple_repeat Simple_repeat 1 126 0 325 234 96 0 chr2 41094421 41094515 -209593339 + MER103 DNA DNA 62 164 -2 3093 92 11 58 chr2 41095617 41096083 -209591771 - MLT2A1 LTR ERVL 0 444 1 281 297 51 25 chr2 41098350 41098468 -209589386 + MIR3 SINE MIR 83 203 -5 11177 37 2 0 chr2 41098500 41100542 -209587312 - L1PA3 LINE L1 0 6155 4112 3856 46 0 36 chr2 41100542 41101046 -209586808 + L1P LINE L1 622 1107 -5039 762 85 0 0 chr2 41101046 41101140 -209586714 - AluS SINE Alu -214 98 5 1251 168 80 9 chr2 41101149 41101375 -209586479 - MER21B LTR ERV1 -227 636 395 686 302 15 0 chr2 41101644 41101849 -209586005 - MIR SINE MIR -10 252 45 1294 145 36 0 chr2 41102182 41102403 -209585451 - L1MD3 LINE L1 0 7995 7767 1156 172 57 55 chr2 41102416 41102816 -209585038 - MLT1A1 LTR MaLR 0 365 9 3476 204 44 10 chr2 41102827 41103593 -209584261 - L1MC4a LINE L1 -227 7581 6790 5135 145 33 29 chr2 41103618 41104508 -209583346 - L1MC2 LINE L1 -8 6336 5444 230 342 0 33 chr2 41104731 41104883 -209582971 - HAL1b LINE L1 -653 695 549 317 129 0 16 chr2 41105293 41105355 -209582499 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 370 308 58 17 chr2 41105356 41105528 -209582326 + MLT1K LTR MaLR 396 574 -14 661 79 10 40 chr2 41107300 41107401 -209580453 - Tigger5 DNA MER2_type -91 2232 2135 2476 147 65 31 chr2 41107403 41107818 -209580036 + Tigger2a DNA MER2_type 3 431 -3 474 225 57 105 chr2 41107834 41108043 -209579811 + MLT1K LTR MaLR 378 576 -12 419 323 12 12 chr2 41108049 41108216 -209579638 - HAL1b LINE L1 -833 515 349 327 332 164 48 chr2 41108882 41109132 -209578722 - L2 LINE L2 -21 3251 2973 2369 82 3 13 chr2 41109387 41109691 -209578163 - AluSg SINE Alu -9 301 1 220 392 0 0 chr2 41109938 41110040 -209577814 - MIR SINE MIR -72 190 89 458 289 119 34 chr2 41110744 41110979 -209576875 + MIR SINE MIR 2 256 -6 23 33 0 0 chr2 41111473 41111503 -209576351 + AT_rich Low_complexity Low_complexity 1 30 0 198 242 21 116 chr2 41112313 41112408 -209575446 - L3 LINE CR1 -5 1572 1487 234 330 44 0 chr2 41112666 41112757 -209575097 - MIR3 SINE MIR -48 160 66 411 56 0 0 chr2 41113108 41113162 -209574692 + (CA)n Simple_repeat Simple_repeat 2 55 0 1055 130 43 133 chr2 41114835 41115100 -209572754 + MER33 DNA MER1_type 26 258 -2327 2011 159 3 0 chr2 41115100 41115409 -209572445 + AluJb SINE Alu 1 310 -2 1055 130 43 133 chr2 41115409 41115466 -209572388 + MER33 DNA MER1_type 258 319 -5 262 224 0 35 chr2 41115896 41115954 -209571900 + G-rich Low_complexity Low_complexity 2 57 0 1621 148 35 12 chr2 41116784 41117116 -209570738 - MER61C LTR ERV1 0 434 3 436 267 113 13 chr2 41117204 41117354 -209570500 + MER5A DNA MER1_type 25 189 0 679 288 20 14 chr2 41117435 41117651 -209570203 - MIR SINE MIR -14 248 26 10137 27 0 196 chr2 41117693 41119417 -209568437 - SVA Other Other 0 1386 1 256 269 75 0 chr2 41119558 41119625 -209568229 - MIR SINE MIR -98 110 39 1746 107 7 22 chr2 41119738 41120008 -209567846 - L1MA9 LINE L1 0 6312 6047 383 291 69 11 chr2 41120571 41120746 -209567108 - L1MC/D LINE L1 -1984 5824 5640 1688 107 25 0 chr2 41120750 41120992 -209566862 - L1PA14 LINE L1 -2 6159 5912 788 142 17 0 chr2 41120993 41121113 -209566741 + L1PA14 LINE L1 5826 5947 -214 * 991 267 43 8 chr2 41121095 41121398 -209566456 - L1MC/D LINE L1 -468 5653 5338 242 254 0 0 chr2 41122140 41122195 -209565659 + MER5A DNA MER1_type 60 114 -75 279 321 74 6 chr2 41124240 41124399 -209563455 - MIR3 SINE MIR -68 140 4 2374 77 44 0 chr2 41124931 41125229 -209562625 + AluY SINE Alu 1 311 0 262 215 92 15 chr2 41125236 41125301 -209562553 + MIR SINE MIR 20 89 -173 195 129 0 0 chr2 41125359 41125390 -209562464 + (TAA)n Simple_repeat Simple_repeat 1 31 0 243 262 78 39 chr2 41125399 41125502 -209562352 - MIR SINE MIR -6 256 150 305 369 37 33 chr2 41125535 41125779 -209562075 - L2 LINE L2 0 3272 3028 284 170 0 0 chr2 41126874 41126921 -209560933 + MIR SINE MIR 92 138 -70 1797 162 26 20 chr2 41126951 41127122 -209560732 - AluJb SINE Alu -7 305 130 2370 85 0 0 chr2 41127122 41127416 -209560438 - AluSc SINE Alu -11 298 5 1797 162 26 20 chr2 41127416 41127547 -209560307 - AluJb SINE Alu -182 130 1 494 297 62 34 chr2 41127631 41127840 -209560014 + MIR SINE MIR 48 262 0 183 366 35 63 chr2 41128055 41128197 -209559657 - L2 LINE L2 -1 3271 3134 781 288 60 0 chr2 41128556 41128789 -209559065 - MIR SINE MIR -4 258 12 2394 98 0 0 chr2 41129784 41130090 -209557764 + AluSx SINE Alu 1 306 -6 3001 145 30 35 chr2 41131014 41131553 -209556301 - L1MA9 LINE L1 0 6312 5777 198 191 0 0 chr2 41131560 41131602 -209556252 + (TA)n Simple_repeat Simple_repeat 2 43 0 306 50 0 0 chr2 41131673 41131713 -209556141 + (CA)n Simple_repeat Simple_repeat 1 40 0 1914 140 11 0 chr2 41133043 41133349 -209554505 + AluJb SINE Alu 1 309 0 2389 83 114 15 chr2 41133394 41133835 -209554019 + MER1A DNA MER1_type 1 523 -6 297 313 70 0 chr2 41133838 41133966 -209553888 + L1MC4a LINE L1 5769 5905 -1903 2205 85 7 0 chr2 41134089 41134400 -209553454 - AluSq SINE Alu 0 313 1 7404 110 58 31 chr2 41134644 41135842 -209552012 - Tigger3b DNA MER2_type -1 1230 1 269 303 136 8 chr2 41135985 41136117 -209551737 - MIR SINE MIR -50 212 64 230 317 50 0 chr2 41136160 41136220 -209551634 + MIR SINE MIR 87 149 -59 2306 86 7 3 chr2 41136818 41137119 -209550735 - AluSx SINE Alu -10 302 1 2353 148 101 13 chr2 41137154 41137620 -209550234 - MER74A LTR ERVL -51 507 1 22 0 0 0 chr2 41138055 41138077 -209549777 + AT_rich Low_complexity Low_complexity 1 22 0 2148 139 0 0 chr2 41138213 41138516 -209549338 - AluSx SINE Alu -9 303 1 21 0 0 0 chr2 41138831 41138852 -209549002 + AT_rich Low_complexity Low_complexity 1 21 0 237 178 0 0 chr2 41139258 41139303 -209548551 + T-rich Low_complexity Low_complexity 1 45 0 1838 203 68 62 chr2 41140035 41140537 -209547317 - MLT1D LTR MaLR 0 505 1 279 192 41 0 chr2 41140807 41140880 -209546974 + A-rich Low_complexity Low_complexity 4 79 0 1910 96 3 21 chr2 41140974 41141256 -209546598 - L1PA8 LINE L1 -2 6170 5894 8035 25 0 2 chr2 41141858 41143195 -209544659 - L1PA4 LINE L1 -5 6150 4814 3729 235 85 21 chr2 41143227 41144340 -209543514 + L2 LINE L2 1420 2604 -710 897 238 11 75 chr2 41144354 41144619 -209543235 + MIR SINE MIR 11 258 -4 6741 100 14 0 chr2 41145088 41145796 -209542058 + L1PA8 LINE L1 4457 5153 -1019 2118 133 7 0 chr2 41145796 41146104 -209541750 + AluSg SINE Alu 1 310 0 6741 100 14 0 chr2 41146104 41147120 -209540734 + L1PA8 LINE L1 5153 6164 -8 22 0 0 0 chr2 41147120 41147142 -209540712 + AT_rich Low_complexity Low_complexity 1 22 0 444 286 101 50 chr2 41148954 41149192 -209538662 - MIR SINE MIR -12 250 1 1379 283 216 26 chr2 41149226 41149611 -209538243 + L2 LINE L2 2013 2324 -990 2341 108 3 0 chr2 41149611 41149927 -209537927 - L1PA14 LINE L1 0 6161 5845 1379 283 216 26 chr2 41149927 41150351 -209537503 + L2 LINE L2 2324 2976 -338 262 301 52 52 chr2 41151551 41151687 -209536167 + L2 LINE L2 3132 3267 -5 210 329 32 111 chr2 41153172 41153388 -209534466 + L2 LINE L2 2981 3179 -93 319 278 8 52 chr2 41155703 41155986 -209531868 + G-rich Low_complexity Low_complexity 1 270 0 205 264 42 30 chr2 41155904 41156071 -209531783 + (CGGG)n Simple_repeat Simple_repeat 3 171 0 * 21 71 0 0 chr2 41156098 41156140 -209531714 + GC_rich Low_complexity Low_complexity 1 42 0 318 305 125 62 chr2 41156143 41156582 -209531272 + L1M2 LINE L1 941 1407 -5442 255 313 0 57 chr2 41156696 41156872 -209530982 + CT-rich Low_complexity Low_complexity 4 169 0 358 311 91 8 chr2 41158339 41158471 -209529383 - L3 LINE CR1 -3 1574 1432 248 331 55 31 chr2 41158604 41158767 -209529087 + MIR3 SINE MIR 41 207 -1 331 281 104 0 chr2 41158911 41159007 -209528847 + MIR3 SINE MIR 69 174 -34 327 343 90 45 chr2 41159824 41160069 -209527785 - L3 LINE CR1 -945 632 377 189 107 0 0 chr2 41160464 41160492 -209527362 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 379 286 10 10 chr2 41160508 41160606 -209527248 - L2 LINE L2 -39 3274 3177 273 216 91 11 chr2 41161768 41161856 -209525998 - Charlie7 DNA MER1_type -48 2564 2470 232 316 21 0 chr2 41161883 41161978 -209525876 - Charlie7 DNA MER1_type -2514 98 2 1545 169 10 59 chr2 41162691 41162998 -209524856 - AluJo SINE Alu -11 301 10 3103 133 17 0 chr2 41164377 41164842 -209523012 + L1PB1 LINE L1 5678 6150 -1 21 0 0 0 chr2 41164842 41164863 -209522991 + AT_rich Low_complexity Low_complexity 1 21 0 1467 188 7 22 chr2 41165956 41166232 -209521622 - AluJo SINE Alu -18 294 23 358 267 0 11 chr2 41166366 41166456 -209521398 - MLT1L LTR MaLR -15 600 512 1088 157 31 14 chr2 41166659 41166882 -209520972 - MLT1L LTR MaLR -348 267 41 263 279 0 13 chr2 41168130 41168209 -209519645 + GA-rich Low_complexity Low_complexity 3 80 0 2929 155 71 2 chr2 41168341 41168850 -209519004 + L1MB5 LINE L1 5585 6128 -46 338 376 43 8 chr2 41168949 41169183 -209518671 + L2 LINE L2 2814 3055 -217 512 329 12 6 chr2 41170245 41170415 -209517439 + MIR3 SINE MIR 36 206 -2 446 260 62 45 chr2 41172100 41172277 -209515577 + MIR3 SINE MIR 20 199 -9 301 213 293 48 chr2 41174451 41174724 -209513130 - L1ME4a LINE L1 0 6121 5782 324 284 95 52 chr2 41174757 41175084 -209512770 + L2 LINE L2 2671 3020 -252 215 329 65 75 chr2 41175163 41175485 -209512369 + L2 LINE L2 2642 2960 -354 246 211 0 18 chr2 41175640 41175697 -209512157 + L2 LINE L2 3184 3239 -74 477 0 0 0 chr2 41177134 41177187 -209510667 + (TG)n Simple_repeat Simple_repeat 2 54 0 730 235 146 3 chr2 41178027 41178260 -209509594 + MIR SINE MIR 1 261 -1 301 311 140 12 chr2 41178270 41178434 -209509420 + MIR SINE MIR 78 262 0 197 143 0 0 chr2 41179615 41179650 -209508204 + L2 LINE L2 3238 3272 0 1007 142 22 11 chr2 41179701 41179884 -209507970 + L1MB3 LINE L1 5956 6140 -43 4891 247 90 18 chr2 41179887 41181612 -209506242 + L1M3c LINE L1 2 1850 -4361 1898 158 3 46 chr2 41181613 41181979 -209505875 + L1MA9 LINE L1 5454 5803 -509 344 125 0 0 chr2 41181986 41182042 -209505812 - L1M1 LINE L1 -517 5788 5733 186 103 0 0 chr2 41182103 41182132 -209505722 + (TA)n Simple_repeat Simple_repeat 2 30 0 2761 127 26 45 chr2 41182132 41182622 -209505232 + L1MA9 LINE L1 5794 6274 -38 386 103 0 0 chr2 41182622 41182679 -209505175 + L1MB2 LINE L1 6114 6171 0 600 275 41 12 chr2 41182829 41183000 -209504854 - MIR SINE MIR -7 255 80 933 122 0 0 chr2 41183175 41183314 -209504540 + AluY SINE Alu 173 311 0 267 103 0 0 chr2 41184318 41184357 -209503497 + (TAA)n Simple_repeat Simple_repeat 2 40 0 501 225 172 13 chr2 41184377 41184528 -209503326 - MIR SINE MIR -57 205 31 710 173 6 32 chr2 41184767 41184923 -209502931 + MER33 DNA MER1_type 27 178 -146 306 214 43 0 chr2 41184952 41185022 -209502832 + MER33 DNA MER1_type 252 324 0 29 60 0 0 chr2 41186077 41186127 -209501727 + AT_rich Low_complexity Low_complexity 1 50 0 248 288 0 0 chr2 41186159 41186232 -209501622 - MER113 DNA MER1_type? -415 106 34 710 243 133 13 chr2 41186589 41186815 -209501039 - MIR SINE MIR -8 254 2 292 172 50 111 chr2 41188440 41188539 -209499315 + MIR SINE MIR 89 181 -81 4732 224 95 30 chr2 41188546 41189197 -209498657 - L1 LINE L1 -2211 4433 3825 1821 166 0 3 chr2 41189197 41189481 -209498373 - AluSx SINE Alu -13 299 17 4732 224 95 30 chr2 41189481 41189630 -209498224 - L1 LINE L1 -2819 3825 3687 1916 149 7 3 chr2 41189630 41189925 -209497929 - AluJo SINE Alu -15 297 2 4732 224 95 30 chr2 41189925 41192631 -209495223 - L1 LINE L1 -2957 3687 684 24 0 0 0 chr2 41192893 41192917 -209494937 + AT_rich Low_complexity Low_complexity 1 24 0 645 273 17 11 chr2 41192950 41193126 -209494728 + MER5A DNA MER1_type 7 183 -6 274 0 26 0 chr2 41196814 41196852 -209491002 - L1PB2 LINE L1 -7 6144 6106 2284 98 20 0 chr2 41197635 41197932 -209489922 - AluSx SINE Alu -5 307 5 500 249 333 4 chr2 41198116 41198580 -209489274 - L2 LINE L2 0 3313 2717 2769 16 3 0 chr2 41198580 41198887 -209488967 - AluY SINE Alu -3 308 1 257 279 15 0 chr2 41200622 41200690 -209487164 + GA-rich Low_complexity Low_complexity 5 73 0 182 247 65 86 chr2 41200966 41201059 -209486795 + L2 LINE L2 1130 1220 -2094 23 68 0 0 chr2 41201455 41201499 -209486355 + AT_rich Low_complexity Low_complexity 1 44 0 1254 228 39 22 chr2 41201896 41202208 -209485646 - MER46C DNA MER2_type 0 338 22 333 0 0 0 chr2 41202212 41202249 -209485605 + (TG)n Simple_repeat Simple_repeat 2 38 0 198 0 0 0 chr2 41202833 41202855 -209484999 + (TC)n Simple_repeat Simple_repeat 2 23 0 209 354 0 15 chr2 41203380 41203445 -209484409 + L2 LINE L2 3244 3307 -6 2236 136 71 8 chr2 41203554 41203921 -209483933 + MLT1B LTR MaLR 1 390 0 449 317 56 22 chr2 41205113 41205293 -209482561 - MIR3 SINE MIR 0 208 23 308 282 35 0 chr2 41206951 41207036 -209480818 + L2 LINE L2 3185 3272 0 250 236 0 18 chr2 41208359 41208414 -209479440 + CT-rich Low_complexity Low_complexity 1 54 0 653 223 51 40 chr2 41208491 41208666 -209479188 + MER5B DNA MER1_type 1 177 -1 385 231 149 0 chr2 41208716 41208837 -209479017 - MIR SINE MIR -12 250 112 475 209 45 18 chr2 41210072 41210182 -209477672 - L2 LINE L2 -10 3303 3191 235 325 179 13 chr2 41210591 41210893 -209476961 + L2 LINE L2 2921 3272 0 536 313 101 58 chr2 41211694 41211882 -209475972 - L2 LINE L2 -417 2897 2719 1593 155 59 33 chr2 41211882 41212186 -209475668 + AluJo SINE Alu 1 312 0 536 313 101 58 chr2 41212186 41212432 -209475422 - L2 LINE L2 -595 2719 2444 204 97 0 0 chr2 41213581 41213612 -209474242 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 261 275 29 14 chr2 41213849 41213918 -209473936 - MIR SINE MIR -105 157 88 526 257 117 127 chr2 41216116 41216741 -209471113 - L2 LINE L2 -1 3312 2708 192 179 0 0 chr2 41217475 41217514 -209470340 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 6269 54 11 0 chr2 41217737 41218477 -209469377 - L1PA6 LINE L1 0 6154 5407 941 293 123 23 chr2 41219199 41219629 -209468225 - LTR67 LTR ERVL -9 548 76 350 335 50 20 chr2 41219936 41220136 -209467718 + LTR16C LTR ERVL 193 398 -93 440 309 24 18 chr2 41220226 41220391 -209467463 - ERVL LTR ERVL -696 5068 4903 1076 299 107 36 chr2 41220898 41221429 -209466425 - ERVL LTR ERVL -780 4874 4306 1517 191 85 59 chr2 41221447 41221871 -209465983 - MSTB2 LTR MaLR 0 457 23 1924 280 116 36 chr2 41221880 41223001 -209464853 - ERVL LTR ERVL -1383 4271 3061 512 294 94 21 chr2 41223067 41223302 -209464552 - ERVL LTR ERVL -3381 2383 2132 490 216 0 20 chr2 41223303 41223405 -209464449 + L2 LINE L2 1399 1498 -1816 3807 247 61 78 chr2 41223996 41225395 -209462459 + L2 LINE L2 1485 2859 -455 553 195 8 42 chr2 41225399 41225517 -209462337 - MER20 DNA MER1_type -105 114 1 595 315 14 18 chr2 41225812 41226034 -209461820 - LTR67 LTR ERVL -8 549 329 415 236 22 0 chr2 41226075 41226164 -209461690 - LTR67 LTR ERVL -434 123 33 493 302 159 3 chr2 41228077 41228448 -209459406 - L2 LINE L2 -922 2392 1964 1827 154 7 7 chr2 41228452 41228744 -209459110 + AluJb SINE Alu 1 292 -20 475 137 40 0 chr2 41228759 41228883 -209458971 + (TA)n Simple_repeat Simple_repeat 2 130 0 640 295 180 20 chr2 41229223 41229819 -209458035 + L2 LINE L2 2596 3285 -28 467 165 34 37 chr2 41230028 41230149 -209457705 + L1M2 LINE L1 5548 5670 -461 420 281 43 7 chr2 41230183 41230322 -209457532 - MIR SINE MIR -4 258 115 278 254 107 46 chr2 41230363 41230560 -209457294 + L1ME4a LINE L1 5686 5894 -227 235 286 88 22 chr2 41230682 41230773 -209457081 - HAL1b LINE L1 -61 1287 1191 204 97 0 0 chr2 41230776 41230807 -209457047 + (TTTTC)n Simple_repeat Simple_repeat 4 34 0 1481 204 41 20 chr2 41230886 41231180 -209456674 - AluJo SINE Alu -10 302 3 490 291 209 0 chr2 41232128 41232334 -209455520 - MIR SINE MIR -10 252 4 557 293 0 46 chr2 41232862 41233036 -209454818 + MER5B DNA MER1_type 3 168 -10 2737 125 19 21 chr2 41233617 41234050 -209453804 + MSTB1 LTR MaLR 1 432 0 289 262 71 0 chr2 41234106 41234190 -209453664 + MIR SINE MIR 56 145 -117 814 229 157 0 chr2 41236065 41236275 -209451579 + MIR SINE MIR 14 256 -6 400 125 0 0 chr2 41236472 41236528 -209451326 + MER5A DNA MER1_type 1 56 -133 277 241 51 13 chr2 41236530 41236609 -209451245 - MER5A DNA MER1_type -12 177 96 754 283 108 6 chr2 41237029 41237361 -209450493 - HAL1b LINE L1 -521 827 462 242 242 106 0 chr2 41237638 41237704 -209450150 + MER94 DNA DNA 3 75 -59 1354 196 176 10 chr2 41237835 41238351 -209449503 + MER114 LTR ERV 47 648 0 2224 81 46 0 chr2 41238591 41238874 -209448980 + AluSc SINE Alu 1 296 -13 1483 163 57 50 chr2 41238876 41239177 -209448677 + AluJo SINE Alu 1 303 -9 5686 119 28 0 chr2 41239769 41240632 -209447222 - L1PA11 LINE L1 0 6174 5285 1823 134 8 0 chr2 41240632 41240894 -209446960 + AluSx SINE Alu 38 301 -11 1892 134 23 33 chr2 41241852 41242158 -209445696 - AluSx SINE Alu -9 303 1 515 275 101 50 chr2 41242358 41242576 -209445278 - MIR SINE MIR -27 235 7 21 36 0 0 chr2 41242968 41242996 -209444858 + AT_rich Low_complexity Low_complexity 1 28 0 1967 247 226 37 chr2 41243087 41244088 -209443766 + L2 LINE L2 1522 2711 -603 363 155 17 0 chr2 41244941 41244999 -209442855 - MER81 DNA DNA -1 113 55 889 266 200 0 chr2 41246239 41246544 -209441310 - L2 LINE L2 -1563 1751 1386 884 56 0 0 chr2 41246551 41246659 -209441195 + AluY SINE Alu 190 297 -14 490 226 133 15 chr2 41246661 41246856 -209440998 - L2 LINE L2 -2257 1057 840 270 0 0 0 chr2 41247080 41247110 -209440744 + (TAA)n Simple_repeat Simple_repeat 1 30 0 823 233 287 15 chr2 41247133 41247537 -209440317 - L2 LINE L2 -2461 853 340 24 0 0 0 chr2 41248344 41248368 -209439486 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 41249154 41249178 -209438676 + AT_rich Low_complexity Low_complexity 1 24 0 247 333 14 0 chr2 41249204 41249351 -209438503 + HAL1 LINE L1 1112 1260 -1247 36 40 0 0 chr2 41249428 41249478 -209438376 + AT_rich Low_complexity Low_complexity 1 50 0 619 302 56 14 chr2 41249526 41249741 -209438113 - MIR SINE MIR 0 262 39 485 323 14 23 chr2 41249743 41250040 -209437814 + HAL1b LINE L1 307 583 -765 255 170 0 0 chr2 41300861 41300908 -209386946 + (CA)n Simple_repeat Simple_repeat 1 47 0 374 284 37 30 chr2 41301192 41301326 -209386528 - MER5B DNA MER1_type -13 165 31 326 297 144 48 chr2 41303262 41303491 -209384363 + L1MB8 LINE L1 5587 5837 -1971 183 80 0 0 chr2 41304402 41304427 -209383427 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 270 343 28 9 chr2 41305488 41305596 -209382258 + L2 LINE L2 3162 3271 -1 823 232 20 16 chr2 41307571 41307821 -209380033 + L1MB8 LINE L1 5926 6176 -2 1900 149 3 17 chr2 41307889 41308190 -209379664 - AluJo SINE Alu -15 297 1 570 270 83 61 chr2 41309696 41309926 -209377928 - MIR SINE MIR -8 254 20 234 0 0 0 chr2 41310513 41310539 -209377315 + (T)n Simple_repeat Simple_repeat 1 26 0 268 304 59 52 chr2 41310876 41311011 -209376843 + MIR SINE MIR 13 148 -114 283 304 170 18 chr2 41311051 41311163 -209376691 + MER91C DNA MER1_type 1 129 -11 2378 92 0 0 chr2 41312730 41313046 -209374808 - AluSx SINE Alu 0 316 1 1089 328 155 32 chr2 41313507 41314080 -209373774 - L2 LINE L2 -126 3187 2686 2027 130 0 37 chr2 41314080 41314402 -209373452 + AluSx SINE Alu 1 310 -2 1089 328 155 32 chr2 41314402 41314795 -209373059 - L2 LINE L2 -627 2686 2100 559 270 31 25 chr2 41316690 41316853 -209371001 - MIR SINE MIR -14 248 85 429 272 123 25 chr2 41317217 41317379 -209370475 - MER5A DNA MER1_type -11 178 1 324 349 124 48 chr2 41318923 41319129 -209368725 + L2 LINE L2 2891 3080 -192 591 217 133 0 chr2 41319129 41319295 -209368559 + MER5A DNA MER1_type 1 188 -1 324 349 124 48 chr2 41319295 41319443 -209368411 + L2 LINE L2 3080 3272 0 1903 167 20 48 chr2 41320327 41320723 -209367131 + MLT1B LTR MaLR 1 385 -5 224 243 0 29 chr2 41320799 41320869 -209366985 + T-rich Low_complexity Low_complexity 5 72 0 255 31 0 0 chr2 41321589 41321621 -209366233 + (TG)n Simple_repeat Simple_repeat 1 32 0 277 273 49 45 chr2 41322531 41322676 -209365178 + MIR SINE MIR 28 185 -63 571 304 25 25 chr2 41322898 41323102 -209364752 - MIR SINE MIR -20 242 39 1216 233 50 52 chr2 41323465 41323941 -209363913 - L1MA9 LINE L1 -38 6274 5800 216 295 0 0 chr2 41324376 41324437 -209363417 + (TG)n Simple_repeat Simple_repeat 1 61 0 1458 115 188 0 chr2 41325094 41325355 -209362499 - MER1A DNA MER1_type 0 529 220 333 270 30 20 chr2 41326544 41326644 -209361210 - MIR SINE MIR -75 187 87 203 243 129 0 chr2 41327301 41327371 -209360483 + MIR SINE MIR 72 150 -112 704 286 181 48 chr2 41327883 41328281 -209359573 - L2 LINE L2 0 3313 2863 189 223 159 102 chr2 41328626 41328783 -209359071 + MIR3 SINE MIR 41 206 -2 212 86 29 0 chr2 41329910 41329945 -209357909 + (TG)n Simple_repeat Simple_repeat 2 37 0 302 245 0 92 chr2 41330041 41330139 -209357715 - L2 LINE L2 0 3272 3184 1926 148 0 36 chr2 41331066 41331370 -209356484 - AluSx SINE Alu -19 293 1 824 179 12 24 chr2 41331470 41331638 -209356216 + FAM SINE Alu 1 166 -9 229 305 12 49 chr2 41331967 41332049 -209355805 - MIR SINE MIR -145 117 39 391 288 57 48 chr2 41332684 41332878 -209354976 + MIR SINE MIR 11 210 -52 2311 81 0 72 chr2 41332947 41333281 -209354573 - AluY SINE Alu -1 310 1 1519 148 17 4 chr2 41333322 41333559 -209354295 - AluJo SINE Alu -12 300 61 2329 70 0 0 chr2 41333777 41334083 -209353771 - AluY SINE Alu 0 306 1 437 341 8 0 chr2 41334879 41335008 -209352846 - MIR3 SINE MIR -21 187 58 335 325 13 13 chr2 41335396 41335553 -209352301 + (TG)n Simple_repeat Simple_repeat 2 158 0 254 281 35 61 chr2 41335595 41335709 -209352145 + MIR SINE MIR 33 143 -119 258 251 52 103 chr2 41335911 41336121 -209351733 - MIR SINE MIR -75 187 3 529 326 48 13 chr2 41337766 41337993 -209349861 + L2 LINE L2 3041 3275 -38 821 230 69 43 chr2 41345765 41346156 -209341698 - MER113 DNA MER1_type? -64 457 57 22 56 0 0 chr2 41346496 41346532 -209341322 + AT_rich Low_complexity Low_complexity 1 36 0 299 254 0 15 chr2 41346590 41346657 -209341197 + L2 LINE L2 3242 3307 -6 210 236 46 196 chr2 41346767 41347093 -209340761 - L2 LINE L2 -95 3177 2901 1741 185 0 13 chr2 41348313 41348615 -209339239 + AluJb SINE Alu 1 298 -14 187 214 71 0 chr2 41349509 41349551 -209338303 + MIR SINE MIR 118 162 -100 437 307 0 0 chr2 41349736 41349850 -209338004 + MIR SINE MIR 33 146 -62 2341 76 0 3 chr2 41351315 41351603 -209336251 + AluSc SINE Alu 1 287 -22 387 364 11 30 chr2 41351786 41352050 -209335804 + L3 LINE CR1 655 913 -664 33 66 0 0 chr2 41352847 41352908 -209334946 + AT_rich Low_complexity Low_complexity 1 61 0 226 274 0 0 chr2 41354135 41354186 -209333668 + (TG)n Simple_repeat Simple_repeat 2 52 0 27 73 0 0 chr2 41357635 41357690 -209330164 + AT_rich Low_complexity Low_complexity 1 55 0 2418 97 0 0 chr2 41359606 41359914 -209327940 - AluSq SINE Alu -5 308 1 353 273 75 44 chr2 41361714 41361873 -209325981 - MIR SINE MIR -37 171 52 443 191 229 46 chr2 41362191 41362322 -209325532 + MER5A DNA MER1_type 33 187 -2 438 299 45 19 chr2 41362397 41362534 -209325320 + MER5B DNA MER1_type 6 149 -29 1490 161 3 74 chr2 41362534 41362833 -209325021 + AluJo SINE Alu 7 284 -28 438 299 45 19 chr2 41362833 41362849 -209325005 + MER5B DNA MER1_type 149 163 -15 229 225 0 0 chr2 41362865 41362905 -209324949 - MER5B DNA MER1_type -127 51 12 22 56 0 0 chr2 41362921 41362957 -209324897 + AT_rich Low_complexity Low_complexity 1 36 0 252 122 0 0 chr2 41363547 41363588 -209324266 + (A)n Simple_repeat Simple_repeat 1 41 0 4102 148 43 28 chr2 41363588 41364443 -209323411 + L1MB7 LINE L1 5317 6184 0 313 373 25 19 chr2 41365324 41365485 -209322369 + MIR SINE MIR 18 179 -83 1998 120 28 3 chr2 41367984 41368268 -209319586 - AluSx SINE Alu -21 291 1 280 230 198 0 chr2 41368270 41368396 -209319458 - L1ME4a LINE L1 -3 6118 5968 383 325 99 0 chr2 41368950 41369101 -209318753 - MIR3 SINE MIR -41 167 2 192 40 0 0 chr2 41369580 41369605 -209318249 + (TG)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr2 41370414 41370437 -209317417 + AT_rich Low_complexity Low_complexity 1 23 0 189 194 15 90 chr2 41371650 41371717 -209316137 + L2 LINE L2 3201 3262 -10 248 282 14 28 chr2 41371950 41372021 -209315833 - L2 LINE L2 0 3272 3203 342 0 0 0 chr2 41373124 41373162 -209314692 + (TG)n Simple_repeat Simple_repeat 1 38 0 657 63 0 0 chr2 41378828 41378923 -209308931 + (TA)n Simple_repeat Simple_repeat 2 96 0 1892 146 7 40 chr2 41382369 41382670 -209305184 - AluJb SINE Alu -21 291 1 892 189 77 4 chr2 41383357 41383590 -209304264 - MER33 DNA MER1_type -74 250 1 504 125 83 17 chr2 41383797 41383917 -209303937 + L1MA8 LINE L1 6164 6291 0 597 26 0 0 chr2 41384068 41384144 -209303710 - L1PA13 LINE L1 -341 5827 5752 2214 100 16 0 chr2 41384144 41384464 -209303390 + L1PA13 LINE L1 5835 6159 -4 1437 241 112 12 chr2 41385296 41385860 -209301994 + HsTC2 DNA Tc2 1274 1893 -5 21 0 0 0 chr2 41386171 41386192 -209301662 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 41386239 41386260 -209301594 + AT_rich Low_complexity Low_complexity 1 21 0 207 208 62 0 chr2 41387538 41387586 -209300268 - MIR3 SINE MIR -7 201 151 938 290 95 39 chr2 41387622 41388319 -209299535 - L2 LINE L2 -8 3305 2579 1025 226 22 40 chr2 41388320 41388595 -209299259 - L2 LINE L2 -1805 1509 1240 229 178 0 0 chr2 41388630 41388675 -209299179 - MER117 DNA MER1_type -132 65 21 276 364 58 55 chr2 41389962 41390325 -209297529 - L2 LINE L2 -955 2359 1996 2034 141 3 0 chr2 41390938 41391237 -209296617 - AluSc SINE Alu -9 300 1 2027 106 33 23 chr2 41393090 41393392 -209294462 - AluSg SINE Alu -5 305 1 189 205 0 0 chr2 41393782 41393821 -209294033 + MIR SINE MIR 224 262 0 1342 208 24 51 chr2 41393836 41394010 -209293844 - AluJo SINE Alu -26 286 122 2892 16 0 0 chr2 41394010 41394326 -209293528 + AluYb8 SINE Alu 1 316 -2 1342 208 24 51 chr2 41394326 41394445 -209293409 - AluJo SINE Alu -190 122 1 5884 93 14 6 chr2 41394672 41396077 -209291777 - L1PA8 LINE L1 0 6172 4719 277 93 0 0 chr2 41397189 41397232 -209290622 + MADE1 DNA Mariner 38 80 0 252 0 0 0 chr2 41398530 41398558 -209289296 + (T)n Simple_repeat Simple_repeat 1 28 0 186 257 20 10 chr2 41398817 41398918 -209288936 + GA-rich Low_complexity Low_complexity 1 102 0 13237 84 9 0 chr2 41399541 41402180 -209285674 + L1PA7 LINE L1 3501 6152 -2 227 285 32 89 chr2 41403192 41403350 -209284504 - MER5B DNA MER1_type -3 175 27 705 103 34 0 chr2 41403430 41403547 -209284307 + L1P LINE L1 5228 5348 -798 407 335 38 32 chr2 41403882 41404067 -209283787 + MIR SINE MIR 77 262 0 2067 80 53 3 chr2 41406058 41406359 -209281495 + L1PA13 LINE L1 5829 6144 -19 22 0 0 0 chr2 41406360 41406382 -209281472 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 41406717 41406739 -209281115 + AT_rich Low_complexity Low_complexity 1 22 0 383 308 47 30 chr2 41408625 41408794 -209279060 - MIR3 SINE MIR -32 176 5 21 0 0 0 chr2 41409283 41409304 -209278550 + AT_rich Low_complexity Low_complexity 1 21 0 40598 36 22 2 chr2 41411255 41417282 -209270572 - L1PA2 LINE L1 0 6155 5 479 261 83 22 chr2 41418068 41418248 -209269606 - MIR3 SINE MIR -14 194 4 349 133 0 0 chr2 41418293 41418353 -209269501 + Alu SINE Alu 242 301 -1 229 232 0 36 chr2 41419318 41419374 -209268480 - L2 LINE L2 -4 3309 3256 899 192 0 6 chr2 41419385 41419541 -209268313 + FRAM SINE Alu 1 154 -22 2932 165 55 2 chr2 41419596 41420140 -209267714 + L1PA16 LINE L1 5585 6157 -9 231 36 0 0 chr2 41420787 41420815 -209267039 + (TG)n Simple_repeat Simple_repeat 1 28 0 1524 180 21 24 chr2 41421871 41422160 -209265694 + AluJb SINE Alu 18 305 -7 308 219 62 10 chr2 41422935 41423031 -209264823 - MIR SINE MIR -2 260 160 198 0 0 0 chr2 41423220 41423242 -209264612 + (A)n Simple_repeat Simple_repeat 1 22 0 461 263 60 8 chr2 41424540 41424673 -209263181 - MIR SINE MIR -118 144 5 198 0 0 0 chr2 41426089 41426111 -209261743 + (TG)n Simple_repeat Simple_repeat 1 22 0 256 250 61 91 chr2 41426388 41426520 -209261334 - MIR3 SINE MIR -23 185 58 1680 178 36 36 chr2 41426911 41427276 -209260578 + MLT1A1 LTR MaLR 1 365 0 268 304 191 9 chr2 41428865 41428980 -209258874 + MIR SINE MIR 16 151 -111 1936 123 0 31 chr2 41431003 41431296 -209256558 - AluSx SINE Alu -28 284 1 300 318 53 41 chr2 41431354 41431524 -209256330 + L1MC4 LINE L1 6536 6707 -1335 236 300 0 0 chr2 41431573 41431663 -209256191 - L1MC4 LINE L1 -1339 6703 6614 230 104 0 42 chr2 41431672 41431720 -209256134 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 332 253 0 32 chr2 41431720 41431815 -209256039 + L1MC4 LINE L1 6612 6703 -1339 301 326 0 0 chr2 41431792 41431881 -209255973 - L1MC4 LINE L1 -1340 6702 6614 * 401 212 0 10 chr2 41431894 41431993 -209255861 + (TA)n Simple_repeat Simple_repeat 1 98 0 2656 131 21 44 chr2 41431993 41432198 -209255656 + L1MA4 LINE L1 5782 5990 -310 2407 77 3 19 chr2 41432198 41432511 -209255343 + AluSq SINE Alu 1 308 -5 2656 131 21 44 chr2 41432511 41432831 -209255023 + L1MA4 LINE L1 5990 6295 -5 223 281 10 21 chr2 41433613 41433709 -209254145 + CT-rich Low_complexity Low_complexity 4 98 0 293 338 77 8 chr2 41434159 41434326 -209253528 + MIR SINE MIR 19 193 -61 360 64 0 0 chr2 41435664 41435711 -209252143 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 22 0 0 0 chr2 41435873 41435895 -209251959 + AT_rich Low_complexity Low_complexity 1 22 0 2033 136 0 7 chr2 41437212 41437521 -209250333 + AluSx SINE Alu 1 307 -5 262 364 68 8 chr2 41437786 41437904 -209249950 - L3 LINE CR1 -16 1561 1437 745 205 90 13 chr2 41438133 41438289 -209249565 - FRAM SINE Alu -11 165 1 225 333 16 78 chr2 41440569 41440621 -209247233 + L2 LINE L2 3139 3193 -79 2367 88 0 0 chr2 41440621 41440915 -209246939 - AluSc SINE Alu -15 294 1 225 333 16 78 chr2 41440915 41440991 -209246863 + L2 LINE L2 3193 3259 -13 251 218 18 0 chr2 41441272 41441327 -209246527 - L2 LINE L2 0 3313 3258 468 302 99 24 chr2 41441755 41441967 -209245887 + MIR SINE MIR 8 235 -27 216 252 96 43 chr2 41441975 41441991 -209245863 - MIR SINE MIR -33 229 215 7574 25 6 0 chr2 41441991 41443510 -209244344 + L1PA4 LINE L1 4625 6152 -3 216 252 96 43 chr2 41443510 41443608 -209244246 - MIR SINE MIR -47 215 109 320 292 25 17 chr2 41443615 41443735 -209244119 + MLT1I LTR MaLR 52 172 -237 450 235 0 10 chr2 41443829 41443931 -209243923 + MLT1I LTR MaLR 303 403 -6 22823 47 1 0 chr2 41444613 41447610 -209240244 + L1P LINE L1 1107 4107 -2039 180 349 108 0 chr2 41448885 41448968 -209238886 - MIR SINE MIR -66 142 51 347 332 40 5 chr2 41450303 41450502 -209237352 - L1ME3 LINE L1 -336 5826 5621 290 241 26 17 chr2 41450655 41450771 -209237083 - L1ME3 LINE L1 -930 5429 5313 189 261 130 0 chr2 41450793 41450862 -209236992 - MIR SINE MIR -21 241 164 342 283 29 35 chr2 41451055 41451228 -209236626 - L1ME3 LINE L1 -2453 3693 3522 279 259 0 0 chr2 41451566 41451651 -209236203 + GA-rich Low_complexity Low_complexity 4 88 0 23 33 0 0 chr2 41451873 41451903 -209235951 + AT_rich Low_complexity Low_complexity 1 30 0 324 285 73 20 chr2 41451946 41452097 -209235757 - L1MC3 LINE L1 -1860 5925 5767 482 282 43 43 chr2 41452266 41452429 -209235425 - L2 LINE L2 -302 3011 2849 860 45 0 9 chr2 41452429 41452541 -209235313 + L1MA8 LINE L1 5620 5730 -570 1530 145 24 24 chr2 41452545 41452842 -209235012 + L1MA8 LINE L1 5813 6109 -182 474 216 0 0 chr2 41452847 41452935 -209234919 + Tigger3(Golem) DNA MER2_type 11 98 -2931 4045 129 60 7 chr2 41452938 41453682 -209234172 + Tigger3(Golem) DNA MER2_type 2246 3029 0 617 193 84 0 chr2 41453682 41453848 -209234006 + L1MA8 LINE L1 6108 6287 -4 354 204 258 0 chr2 41453942 41454074 -209233780 - L2 LINE L2 -568 2746 2581 285 304 88 53 chr2 41454072 41454243 -209233611 - MIR SINE MIR -60 202 26 * 224 333 0 0 chr2 41454817 41454892 -209232962 - MIR3 SINE MIR -25 183 109 326 289 96 15 chr2 41454995 41455130 -209232724 + MIR SINE MIR 63 208 -54 461 307 13 7 chr2 41455615 41455765 -209232089 + MIR SINE MIR 68 218 -44 2569 180 39 10 chr2 41455765 41456281 -209231573 + MER44D DNA MER2_type 20 605 0 23 0 0 0 chr2 41457437 41457460 -209230394 + AT_rich Low_complexity Low_complexity 1 23 0 446 286 136 23 chr2 41459434 41459654 -209228200 - MIR SINE MIR -15 247 3 2520 49 10 3 chr2 41460315 41460623 -209227231 - AluY SINE Alu 0 311 2 402 241 98 0 chr2 41462268 41462380 -209225474 - L2 LINE L2 -4 3309 3187 21 36 0 0 chr2 41462720 41462748 -209225106 + AT_rich Low_complexity Low_complexity 1 28 0 1974 126 3 7 chr2 41464184 41464485 -209223369 - AluSg SINE Alu -10 300 1 194 119 48 0 chr2 41464572 41464614 -209223240 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 1445 158 217 17 chr2 41464724 41465079 -209222775 - MSTA LTR MaLR 0 428 3 1563 228 17 0 chr2 41465535 41465824 -209222030 - AluJb SINE Alu -18 294 1 1102 186 38 0 chr2 41466059 41466269 -209221585 - MER20 DNA MER1_type 0 219 2 476 270 69 54 chr2 41466618 41467007 -209220847 + L1MC4a LINE L1 5608 6002 -119 753 179 152 33 chr2 41467171 41467355 -209220499 + MER20 DNA MER1_type 4 209 -10 183 42 0 0 chr2 41467542 41467566 -209220288 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 40165 38 23 3 chr2 41467566 41473585 -209214269 - L1PA2 LINE L1 -8 6147 1 260 230 58 58 chr2 41473853 41473940 -209213914 - MLT1L LTR MaLR -362 253 167 4598 141 29 17 chr2 41474018 41474477 -209213377 + L1PA16 LINE L1 5313 5789 -377 2331 71 0 3 chr2 41474477 41474787 -209213067 + AluY SINE Alu 1 309 0 4598 141 29 17 chr2 41474787 41475163 -209212691 + L1PA16 LINE L1 5789 6159 -7 377 232 42 68 chr2 41476980 41477170 -209210684 + L1MEc LINE L1 2187 2371 -4025 1622 173 0 11 chr2 41477341 41477612 -209210242 - AluJb SINE Alu -39 273 6 2504 114 5 16 chr2 41479135 41479503 -209208351 + THE1B LTR MaLR 1 364 0 10723 114 15 6 chr2 41479503 41481070 -209206784 + THE1B-int LTR MaLR 1 1580 0 2023 124 6 32 chr2 41481070 41481417 -209206437 + THE1B LTR MaLR 1 338 -26 4133 169 48 22 chr2 41482088 41482861 -209204993 - MER54B LTR ERVL 0 793 1 754 139 0 0 chr2 41483239 41483361 -209204493 - L1P LINE L1 -4924 1222 1101 21821 51 23 1 chr2 41483361 41486917 -209200937 + L1PA5 LINE L1 2559 6149 -5 330 211 60 15 chr2 41486917 41487020 -209200834 + MIR SINE MIR 112 219 -43 396 278 158 8 chr2 41487264 41487397 -209200457 - L2 LINE L2 -2 3270 3118 385 241 23 0 chr2 41488355 41488442 -209199412 + L2 LINE L2 3221 3309 -4 4909 160 54 14 chr2 41489051 41490259 -209197595 + L1MA6 LINE L1 5058 6300 0 461 243 49 14 chr2 41490320 41490464 -209197390 - MIR SINE MIR -14 248 100 1107 213 97 37 chr2 41490890 41491158 -209196696 + AluJb SINE Alu 6 289 -23 193 263 32 63 chr2 41492464 41492559 -209195295 - L2 LINE L2 -8 3264 3173 395 311 76 44 chr2 41492613 41492928 -209194926 - LTR16C LTR ERVL -93 398 74 228 200 53 53 chr2 41493046 41493121 -209194733 - L1ME4a LINE L1 -82 6039 5965 273 276 17 33 chr2 41493259 41493428 -209194426 - LTR16A LTR ERVL -284 166 1 2165 142 7 0 chr2 41494489 41494858 -209192996 - AluSx SINE Alu 0 371 1 392 269 54 54 chr2 41495164 41495511 -209192343 + MLT1J2 LTR MaLR 26 369 -40 528 326 124 0 chr2 41495564 41495782 -209192072 + MIR SINE MIR 15 259 -3 228 200 91 0 chr2 41496707 41496762 -209191092 + L2 LINE L2 3213 3272 0 223 238 0 0 chr2 41498317 41498382 -209189472 + (TG)n Simple_repeat Simple_repeat 1 65 0 21 57 0 0 chr2 41498858 41498893 -209188961 + AT_rich Low_complexity Low_complexity 1 35 0 306 0 0 0 chr2 41499480 41499514 -209188340 + (T)n Simple_repeat Simple_repeat 1 34 0 778 176 0 50 chr2 41499791 41499950 -209187904 - L1PB4 LINE L1 -2 6154 6004 215 136 45 0 chr2 41501275 41501319 -209186535 + CT-rich Low_complexity Low_complexity 4 49 0 2024 102 4 4 chr2 41501319 41501593 -209186261 - AluSc SINE Alu -35 274 1 321 183 17 0 chr2 41502001 41502061 -209185793 + MLT1D LTR MaLR 1 61 -444 298 275 11 0 chr2 41502058 41502149 -209185705 + MLT1J2 LTR MaLR 535 626 0 * 593 259 113 15 chr2 41502902 41503168 -209184686 + LTR43 LTR ERV1 179 470 -132 2398 88 0 0 chr2 41503188 41503494 -209184360 - AluSc SINE Alu -3 306 1 210 222 0 22 chr2 41504213 41504258 -209183596 + G-rich Low_complexity Low_complexity 4 47 0 2145 120 3 28 chr2 41504314 41504631 -209183223 - AluSp SINE Alu -4 309 1 370 291 259 46 chr2 41504667 41505235 -209182619 + L2 LINE L2 1710 2398 -916 200 220 0 20 chr2 41505448 41505498 -209182356 + T-rich Low_complexity Low_complexity 2 50 0 643 230 34 7 chr2 41507514 41507662 -209180192 + MIR SINE MIR 90 241 -21 1069 279 84 9 chr2 41507744 41508091 -209179763 - L2 LINE L2 -710 2604 2232 272 370 74 59 chr2 41509285 41509555 -209178299 + L2 LINE L2 2998 3271 -1 481 324 62 6 chr2 41509724 41509900 -209177954 + MER5A DNA MER1_type 3 188 -1 314 240 0 62 chr2 41510318 41510414 -209177440 + L1MC4 LINE L1 6614 6703 -1339 303 322 0 0 chr2 41510334 41510424 -209177430 - L1MC4 LINE L1 -1339 6703 6614 * 224 333 103 16 chr2 41510701 41510827 -209177027 + MIR SINE MIR 72 208 -54 690 329 20 15 chr2 41510867 41511268 -209176586 + L1MEc LINE L1 40 442 -5954 497 236 56 6 chr2 41511432 41511610 -209176244 + L1MEc LINE L1 726 912 -5484 966 204 144 51 chr2 41512307 41512641 -209175213 + MLT1A1 LTR MaLR 1 365 0 2130 154 67 9 chr2 41512893 41513341 -209174513 + L1MB2 LINE L1 5696 6169 -2 1954 93 0 30 chr2 41513425 41513693 -209174161 + AluSq SINE Alu 1 260 -53 341 336 16 16 chr2 41513707 41513829 -209174025 - MIR3 SINE MIR -73 135 14 21 0 0 0 chr2 41513939 41513960 -209173894 + AT_rich Low_complexity Low_complexity 1 21 0 3299 191 19 63 chr2 41514194 41515068 -209172786 - L1MA9 LINE L1 -145 6167 5332 208 336 131 33 chr2 41515133 41515255 -209172599 - MIR3 SINE MIR -71 137 4 7242 47 5 1 chr2 41515699 41516704 -209171150 + L1PA5 LINE L1 5143 6151 -3 195 129 0 0 chr2 41517212 41517243 -209170611 + (TG)n Simple_repeat Simple_repeat 1 31 0 630 302 125 0 chr2 41517415 41517647 -209170207 - MIR SINE MIR 0 262 2 3397 116 0 13 chr2 41517989 41518525 -209169329 + L1PA13 LINE L1 5634 6162 -1 743 254 51 11 chr2 41518697 41518874 -209168980 + MER5A DNA MER1_type 5 188 -1 1570 177 69 100 chr2 41519193 41519673 -209168181 - MLT1C LTR MaLR -2 465 1 45 19 0 0 chr2 41519971 41520023 -209167831 + AT_rich Low_complexity Low_complexity 1 52 0 202 275 43 14 chr2 41520049 41520118 -209167736 + MIR SINE MIR 109 179 -83 1386 137 50 0 chr2 41520502 41520721 -209167133 - MER30 DNA MER1_type 0 230 1 503 269 119 40 chr2 41521222 41521423 -209166431 + MIR SINE MIR 20 236 -26 327 25 0 0 chr2 41522777 41522817 -209165037 + (TG)n Simple_repeat Simple_repeat 1 40 0 22 35 0 0 chr2 41523539 41523568 -209164286 + AT_rich Low_complexity Low_complexity 1 29 0 205 29 59 0 chr2 41523595 41523629 -209164225 + (TAA)n Simple_repeat Simple_repeat 3 38 0 1875 127 16 95 chr2 41524858 41525237 -209162617 - L1PA16 LINE L1 -4 6162 5814 15937 179 13 13 chr2 41525242 41525338 -209162516 - L1PA13 LINE L1 -19 7582 7487 2628 93 27 5 chr2 41525338 41525705 -209162149 - THE1C LTR MaLR 0 375 1 15937 179 13 13 chr2 41525705 41529932 -209157922 - L1PA13 LINE L1 -114 7487 1918 2092 121 0 24 chr2 41529932 41530229 -209157625 + AluSq SINE Alu 1 290 -23 15937 179 13 13 chr2 41530229 41532146 -209155708 - L1PA13 LINE L1 -5683 1918 2 3691 173 48 9 chr2 41532147 41533450 -209154404 - L1PA16 LINE L1 -332 5834 4476 288 70 0 0 chr2 41533577 41533620 -209154234 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 2051 53 19 0 chr2 41533627 41533893 -209153961 - L1PA7 LINE L1 -3 6151 5881 11684 92 9 1 chr2 41533923 41535698 -209152156 - L1P3 LINE L1 -645 5509 3721 1407 203 125 24 chr2 41535699 41536122 -209151732 - L1 LINE L1 -1662 4484 4019 193 296 136 34 chr2 41536151 41536239 -209151615 - MIR SINE MIR -123 139 43 297 244 130 93 chr2 41536416 41536662 -209151192 - MLT1K LTR MaLR -51 537 283 275 281 55 31 chr2 41537050 41537178 -209150676 + MIR3 SINE MIR 24 154 -54 22 35 0 0 chr2 41537319 41537348 -209150506 + AT_rich Low_complexity Low_complexity 1 29 0 230 271 41 82 chr2 41538816 41538938 -209148916 - MIR SINE MIR -50 212 96 2002 139 7 0 chr2 41539669 41539964 -209147890 + AluSx SINE Alu 1 297 -15 21266 158 35 14 chr2 41539982 41544751 -209143103 - L1MA3 LINE L1 -400 7324 2348 1615 201 10 0 chr2 41544751 41545054 -209142800 - AluJb SINE Alu -2 310 5 21266 158 35 14 chr2 41545054 41547440 -209140414 - L1MA3 LINE L1 -5376 2348 14 787 155 92 6 chr2 41548336 41548510 -209139344 - MER53 DNA DNA 0 189 1 380 256 12 113 chr2 41548511 41548671 -209139183 - MER5B DNA MER1_type -34 144 1 231 153 0 51 chr2 41549650 41549709 -209138145 + L1MA3 LINE L1 6250 6305 0 293 287 96 38 chr2 41550168 41550325 -209137529 + MIR SINE MIR 8 173 -89 207 0 0 0 chr2 41550327 41550350 -209137504 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2202 107 0 0 chr2 41550352 41550641 -209137213 - AluSg SINE Alu -21 289 1 191 59 0 29 chr2 41550648 41550682 -209137172 + (TTTTTA)n Simple_repeat Simple_repeat 4 36 0 1133 260 24 0 chr2 41551079 41551333 -209136521 - MIR SINE MIR -1 261 2 2073 107 23 7 chr2 41551485 41551793 -209136061 + L1PA13 LINE L1 5837 6149 -14 680 313 45 4 chr2 41553941 41554187 -209133667 + MIR SINE MIR 1 256 -6 1917 169 49 53 chr2 41554263 41554731 -209133123 - MER31B LTR ERV1 0 466 1 582 295 33 40 chr2 41554773 41554994 -209132860 - MIR SINE MIR -7 255 38 293 384 0 0 chr2 41556014 41556113 -209131741 + L2 LINE L2 3174 3272 0 21 57 0 0 chr2 41557234 41557269 -209130585 + AT_rich Low_complexity Low_complexity 1 35 0 709 198 42 68 chr2 41560732 41560924 -209126930 - MER5A DNA MER1_type 0 189 3 648 118 0 0 chr2 41565222 41565315 -209122539 + AluS SINE Alu 1 93 -219 960 18 0 0 chr2 41566161 41566270 -209121584 + AluYa5/8 SINE Alu 197 305 -5 26 0 0 0 chr2 41566835 41566861 -209120993 + AT_rich Low_complexity Low_complexity 1 26 0 326 268 0 31 chr2 41572018 41572115 -209115739 + L2 LINE L2 3189 3282 -31 191 125 25 0 chr2 41573852 41573892 -209113962 + A-rich Low_complexity Low_complexity 2 42 0 214 143 20 20 chr2 41574157 41574206 -209113648 + (TA)n Simple_repeat Simple_repeat 2 50 0 193 353 88 12 chr2 41574889 41575059 -209112795 + MER5A DNA MER1_type 7 189 0 2390 35 3 0 chr2 41575282 41575571 -209112283 - L1PA2 LINE L1 -4 6151 5862 588 252 117 33 chr2 41575844 41576058 -209111796 + MIR SINE MIR 4 235 -27 2072 110 0 63 chr2 41576228 41576546 -209111308 + AluSx SINE Alu 1 298 -14 290 342 106 15 chr2 41577024 41577223 -209110631 - MIR SINE MIR -24 238 22 261 0 0 0 chr2 41577573 41577602 -209110252 + (T)n Simple_repeat Simple_repeat 1 29 0 315 276 200 0 chr2 41579389 41579494 -209108360 + MIR3 SINE MIR 60 185 -23 514 301 16 48 chr2 41579859 41579943 -209107911 + MER5A DNA MER1_type 8 93 -96 1455 80 0 15 chr2 41579943 41580143 -209107711 - MER107 DNA MER1_type 0 197 1 514 301 16 48 chr2 41580143 41580244 -209107610 + MER5A DNA MER1_type 93 187 -2 317 174 163 0 chr2 41580594 41580686 -209107168 + MIR SINE MIR 156 262 0 306 264 186 0 chr2 41633736 41633865 -209053989 + L2 LINE L2 3161 3313 0 237 236 95 95 chr2 41633891 41634039 -209053815 - MIR SINE MIR -12 250 103 354 311 25 17 chr2 41634494 41634613 -209053241 + MER5A DNA MER1_type 70 189 0 562 28 0 0 chr2 41636028 41636099 -209051755 - L1PA3 LINE L1 -3 6152 6082 2145 196 34 24 chr2 41636519 41637019 -209050835 - MLT1D LTR MaLR 0 505 1 1003 240 80 90 chr2 41637171 41637933 -209049921 + L2 LINE L2 2555 3313 0 197 250 200 0 chr2 41637931 41638011 -209049843 - L2 LINE L2 -8 3264 3169 * 1798 176 3 6 chr2 41638084 41638397 -209049457 - AluJo SINE Alu 0 312 1 2369 91 0 0 chr2 41639172 41639470 -209048384 - AluSg SINE Alu -12 298 1 1047 98 0 0 chr2 41639489 41639622 -209048232 - AluSp SINE Alu -180 133 1 263 275 7 113 chr2 41641839 41641981 -209045873 + MIR SINE MIR 86 212 -50 358 263 13 155 chr2 41643397 41643489 -209044365 + MIR SINE MIR 63 104 -158 2124 103 7 3 chr2 41643489 41643780 -209044074 + AluSx SINE Alu 2 293 -19 358 263 13 155 chr2 41643780 41643919 -209043935 + MIR SINE MIR 104 261 -1 309 252 36 54 chr2 41643951 41644062 -209043792 - L1MC4 LINE L1 -1321 6721 6613 536 253 137 44 chr2 41644076 41644258 -209043596 - MIR SINE MIR -24 238 40 2206 93 0 0 chr2 41644418 41644745 -209043109 + AluSc SINE Alu 1 327 0 24 77 0 0 chr2 41645061 41645113 -209042741 + AT_rich Low_complexity Low_complexity 1 52 0 198 0 0 0 chr2 41646481 41646503 -209041351 + (A)n Simple_repeat Simple_repeat 1 22 0 415 373 101 29 chr2 41646786 41647102 -209040752 - L2 LINE L2 -18 3254 2916 366 261 17 6 chr2 41650417 41650593 -209037261 + (TA)n Simple_repeat Simple_repeat 1 178 0 300 267 11 11 chr2 41650594 41650684 -209037170 - L1MC4 LINE L1 -1339 6703 6614 287 214 20 0 chr2 41650685 41650845 -209037009 + (TA)n Simple_repeat Simple_repeat 1 163 0 180 97 0 0 chr2 41650871 41650902 -209036952 + (TA)n Simple_repeat Simple_repeat 1 31 0 369 305 175 7 chr2 41651347 41651501 -209036353 - MIR SINE MIR -79 183 4 283 257 48 67 chr2 41652274 41652379 -209035475 + L2 LINE L2 3211 3313 0 342 0 0 0 chr2 41653812 41653850 -209034004 + (TG)n Simple_repeat Simple_repeat 1 38 0 636 219 115 31 chr2 41654791 41654983 -209032871 - MER63A DNA MER1_type -2 208 1 231 36 0 0 chr2 41655064 41655092 -209032762 + (TA)n Simple_repeat Simple_repeat 2 29 0 689 154 15 59 chr2 41655094 41655230 -209032624 - FLAM_C SINE Alu -8 135 6 1958 119 3 35 chr2 41655798 41656092 -209031762 + AluSx SINE Alu 1 286 -26 297 0 0 0 chr2 41656092 41656125 -209031729 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 1958 119 3 35 chr2 41656125 41656142 -209031712 + AluSx SINE Alu 286 302 -10 245 259 0 17 chr2 41659293 41659351 -209028503 + L2 LINE L2 2921 2977 -336 22 56 0 0 chr2 41659551 41659587 -209028267 + AT_rich Low_complexity Low_complexity 1 36 0 311 215 207 16 chr2 41660362 41660483 -209027371 + L1MC/D LINE L1 5609 5752 -2056 469 298 138 6 chr2 41660507 41660688 -209027166 - MIR SINE MIR -16 246 42 180 111 0 0 chr2 41660779 41660806 -209027048 + (GGGAGA)n Simple_repeat Simple_repeat 2 28 0 1921 152 0 10 chr2 41661335 41661632 -209026222 - AluJo SINE Alu -18 294 1 28 29 0 0 chr2 41662872 41662907 -209024947 + AT_rich Low_complexity Low_complexity 1 35 0 598 345 71 35 chr2 41662913 41663365 -209024489 - L3 LINE CR1 -744 833 366 257 304 74 30 chr2 41663530 41663665 -209024189 + MIR3 SINE MIR 54 194 -14 2029 141 3 10 chr2 41664113 41664411 -209023443 - AluSx SINE Alu -16 296 1 192 286 42 59 chr2 41666252 41666371 -209021483 + MIR3 SINE MIR 88 204 -4 447 370 17 6 chr2 41666448 41666621 -209021233 - MIR SINE MIR -30 232 58 606 284 74 5 chr2 41667388 41667603 -209020251 - MIR SINE MIR -1 261 32 1324 85 0 0 chr2 41667675 41667864 -209019990 + L1PB1 LINE L1 5846 6034 -117 497 139 0 0 chr2 41667864 41667936 -209019918 + AluS SINE Alu 1 72 -241 2414 101 0 25 chr2 41667977 41668101 -209019753 - L1PB1 LINE L1 -1 6150 6024 1848 148 28 0 chr2 41668101 41668261 -209019593 - AluSx SINE Alu -21 291 118 387 0 0 0 chr2 41668261 41668304 -209019550 + (TG)n Simple_repeat Simple_repeat 2 44 0 1848 148 28 0 chr2 41668304 41668426 -209019428 - AluSx SINE Alu -194 118 1 2414 101 0 25 chr2 41668426 41668667 -209019187 - L1PB1 LINE L1 -127 6024 5794 261 0 0 0 chr2 41668667 41668696 -209019158 + (TG)n Simple_repeat Simple_repeat 2 30 0 318 226 0 43 chr2 41668735 41668828 -209019026 - L1MC4 LINE L1 -1340 6702 6614 1750 107 11 0 chr2 41668834 41669105 -209018749 - L1P5 LINE L1 -360 5791 5518 333 58 2 0 chr2 41669104 41669153 -209018701 + L1P5 LINE L1 5426 5469 -682 * 638 190 141 0 chr2 41671184 41671345 -209016509 - MER5A DNA MER1_type 0 189 4 679 221 55 0 chr2 41671511 41671674 -209016180 - MER20 DNA MER1_type -6 213 42 182 352 28 0 chr2 41673009 41673080 -209014774 + MIR SINE MIR 91 163 -99 2273 168 58 18 chr2 41673228 41673376 -209014478 + L1MB2 LINE L1 5644 5785 -386 360 43 0 0 chr2 41673376 41673422 -209014432 + (CA)n Simple_repeat Simple_repeat 2 47 0 2273 168 58 18 chr2 41673422 41673773 -209014081 + L1MB2 LINE L1 5785 6163 -8 259 143 52 39 chr2 41674207 41674284 -209013570 + A-rich Low_complexity Low_complexity 2 79 0 196 286 20 0 chr2 41675057 41675106 -209012748 + L3b LINE CR1 1429 1478 -105 2253 116 3 0 chr2 41675726 41676029 -209011825 - AluSg SINE Alu -2 308 5 1666 151 62 3 chr2 41676042 41676366 -209011488 - L1MB7 LINE L1 -16 6168 5826 333 311 30 15 chr2 41676815 41676947 -209010907 - MIR3 SINE MIR -3 205 72 34 0 0 0 chr2 41677603 41677637 -209010217 + AT_rich Low_complexity Low_complexity 1 34 0 283 246 22 78 chr2 41677815 41677994 -209009860 + L1ME4a LINE L1 5947 6115 -6 210 291 73 0 chr2 41678566 41678621 -209009233 + MER91C DNA MER1_type 36 94 -46 21 0 0 0 chr2 41678768 41678789 -209009065 + AT_rich Low_complexity Low_complexity 1 21 0 264 155 31 72 chr2 41679088 41679185 -209008669 - L1MA10 LINE L1 -2 6332 6240 206 211 35 18 chr2 41679187 41679244 -209008610 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 268 250 42 0 chr2 41679248 41679273 -209008581 - L1MA10 LINE L1 -81 6253 6229 3945 229 75 36 chr2 41679273 41679804 -209008050 - L1ME1 LINE L1 -100 6066 5557 818 143 0 16 chr2 41679804 41679930 -209007924 - FLAM_C SINE Alu -7 126 3 3945 229 75 36 chr2 41679930 41681522 -209006332 - L1ME1 LINE L1 -609 5557 3854 201 286 181 30 chr2 41683112 41683245 -209004609 + L2 LINE L2 3087 3239 -74 303 313 38 44 chr2 41684423 41684583 -209003271 - MER5A DNA MER1_type 0 189 31 379 332 133 5 chr2 41684616 41684827 -209003027 - MIR SINE MIR -23 239 2 607 301 97 65 chr2 41685851 41686223 -209001631 - L3 LINE CR1 -175 1402 1019 216 135 0 0 chr2 41686318 41686355 -209001499 + (CAT)n Simple_repeat Simple_repeat 3 39 0 2782 91 11 3 chr2 41687700 41688072 -208999782 - THE1C LTR MaLR 0 375 1 1505 176 3 62 chr2 41688605 41688942 -208998912 + AluJo SINE Alu 1 319 0 328 20 41 0 chr2 41689051 41689100 -208998754 + (CA)n Simple_repeat Simple_repeat 2 52 0 219 211 127 14 chr2 41689104 41689175 -208998679 - MIR SINE MIR -70 192 114 23 0 0 0 chr2 41689236 41689259 -208998595 + AT_rich Low_complexity Low_complexity 1 23 0 329 275 69 46 chr2 41690204 41690335 -208997519 + MER94 DNA DNA 1 134 0 216 161 48 0 chr2 41690876 41690938 -208996916 + CT-rich Low_complexity Low_complexity 3 67 0 1109 84 42 110 chr2 41691889 41692080 -208995774 + AluY SINE Alu 1 178 -133 25 0 0 0 chr2 41693321 41693346 -208994508 + AT_rich Low_complexity Low_complexity 1 25 0 408 275 118 22 chr2 41693458 41693687 -208994167 - L1ME LINE L1 -297 5824 5574 2432 93 39 3 chr2 41693788 41694143 -208993711 + L1PA16 LINE L1 5790 6157 -9 288 358 169 26 chr2 41694454 41695283 -208992571 + L2 LINE L2 1907 2853 -461 384 22 0 0 chr2 41695290 41695335 -208992519 + (CA)n Simple_repeat Simple_repeat 1 45 0 24 32 0 0 chr2 41696318 41696349 -208991505 + AT_rich Low_complexity Low_complexity 1 31 0 360 270 25 69 chr2 41697321 41697480 -208990374 + MIR SINE MIR 111 262 0 2187 71 14 11 chr2 41697802 41698122 -208989732 - AluSx SINE Alu 0 321 1 698 187 8 15 chr2 41698209 41698343 -208989511 - FRAM SINE Alu -43 133 1 2442 84 0 0 chr2 41699386 41699697 -208988157 + AluY SINE Alu 1 311 0 2000 133 10 0 chr2 41699997 41700299 -208987555 + AluSq SINE Alu 1 305 -8 296 271 65 37 chr2 41700355 41700462 -208987392 - MIR3 SINE MIR -5 203 94 21 0 0 0 chr2 41701024 41701045 -208986809 + AT_rich Low_complexity Low_complexity 1 21 0 501 259 105 6 chr2 41703020 41703182 -208984672 + MIR SINE MIR 15 192 -70 319 111 16 16 chr2 41704301 41704364 -208983490 + (TC)n Simple_repeat Simple_repeat 2 64 0 254 288 0 0 chr2 41704560 41704619 -208983235 + (TG)n Simple_repeat Simple_repeat 1 59 0 268 211 132 13 chr2 41706161 41706237 -208981617 + MER103 DNA DNA 30 114 -52 2205 118 0 0 chr2 41706508 41706804 -208981050 + AluSx SINE Alu 1 296 -16 198 103 0 0 chr2 41707527 41707556 -208980298 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 243 314 48 19 chr2 41707835 41707940 -208979914 + MIR SINE MIR 86 193 -69 1130 215 63 70 chr2 41708202 41708630 -208979224 + LTR37B LTR ERV1 38 462 -6 229 341 133 0 chr2 41709192 41709327 -208978527 + MIR3 SINE MIR 43 195 -13 266 277 0 30 chr2 41709395 41709496 -208978358 - MER103 DNA DNA -66 100 3 228 271 14 0 chr2 41709689 41709759 -208978095 - MIR SINE MIR -5 257 187 2824 65 0 3 chr2 41711883 41712255 -208975599 + L1PA8 LINE L1 5802 6172 0 321 89 0 0 chr2 41712277 41712322 -208975532 + (A)n Simple_repeat Simple_repeat 1 45 0 378 257 18 18 chr2 41712598 41712707 -208975147 + MER5A DNA MER1_type 41 149 -40 21 0 0 0 chr2 41713176 41713197 -208974657 + AT_rich Low_complexity Low_complexity 1 21 0 255 258 91 0 chr2 41713329 41713395 -208974459 + MIR SINE MIR 45 116 -146 578 233 8 8 chr2 41713398 41713527 -208974327 - FRAM SINE Alu -46 130 2 469 313 57 23 chr2 41713659 41713835 -208974019 + MIR SINE MIR 21 202 -60 393 322 66 22 chr2 41714380 41714563 -208973291 + MIR3 SINE MIR 3 193 -15 854 269 28 5 chr2 41715687 41715899 -208971955 + MIR SINE MIR 34 250 -12 1649 186 3 10 chr2 41716429 41716720 -208971134 + AluJo SINE Alu 1 289 -23 297 0 0 0 chr2 41716817 41716850 -208971004 + (A)n Simple_repeat Simple_repeat 1 33 0 672 322 42 4 chr2 41717010 41717246 -208970608 - MIR SINE MIR -12 250 6 206 345 95 26 chr2 41718754 41718870 -208968984 + L3b LINE CR1 1427 1550 -33 968 272 78 12 chr2 41720216 41720547 -208967307 - L1MC/D LINE L1 -2097 5711 5359 312 289 0 0 chr2 41721255 41721345 -208966509 + MER103 DNA DNA 2 91 -75 205 191 21 0 chr2 41721529 41721576 -208966278 + MIR SINE MIR 98 145 -117 309 285 136 76 chr2 41722253 41722569 -208965285 + L2 LINE L2 2938 3272 0 1814 138 17 34 chr2 41723451 41723747 -208964107 + AluJo SINE Alu 13 303 -9 844 93 0 23 chr2 41723801 41723930 -208963924 + L1PA7 LINE L1 6026 6151 -3 207 0 0 0 chr2 41724278 41724301 -208963553 + (A)n Simple_repeat Simple_repeat 1 23 0 218 156 22 0 chr2 41724373 41724418 -208963436 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 185 136 0 23 chr2 41724862 41724906 -208962948 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 1201 170 90 7 chr2 41725348 41725625 -208962229 + MER33 DNA MER1_type 25 324 0 226 357 195 11 chr2 41725635 41725907 -208961947 - L2 LINE L2 -503 2811 2490 404 244 134 24 chr2 41726247 41726374 -208961480 - MIR SINE MIR -10 252 112 366 327 10 10 chr2 41726377 41726478 -208961376 + L2 LINE L2 3153 3253 -19 743 217 74 93 chr2 41726717 41726975 -208960879 - MIR SINE MIR 0 262 10 2145 114 20 0 chr2 41728118 41728424 -208959430 - AluSx SINE Alu 0 312 1 1111 312 39 31 chr2 41728817 41729307 -208958547 - MER20B DNA MER1_type -287 496 3 216 0 0 0 chr2 41729567 41729591 -208958263 + (ATG)n Simple_repeat Simple_repeat 2 25 0 180 0 0 0 chr2 41730128 41730148 -208957706 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 207 69 0 0 chr2 41730580 41730609 -208957245 + (TG)n Simple_repeat Simple_repeat 2 30 0 1449 219 21 3 chr2 41731948 41732236 -208955618 + AluJo SINE Alu 1 293 -19 464 246 115 8 chr2 41732337 41732467 -208955387 + MIR SINE MIR 109 252 -10 195 274 251 74 chr2 41732576 41732751 -208955103 + MIR SINE MIR 56 261 -1 * 367 273 29 46 chr2 41732734 41732940 -208954914 - MIR SINE MIR -49 213 16 1933 314 77 18 chr2 41733850 41734772 -208953082 - L3 LINE CR1 -420 1157 182 1022 82 129 12 chr2 41734834 41735005 -208952849 - L1PA13 LINE L1 -19 6144 5954 2672 184 4 0 chr2 41735005 41735515 -208952339 + L1P LINE L1 4728 5239 -907 248 200 100 44 chr2 41736989 41737079 -208950775 - MIR SINE MIR -50 212 118 390 317 0 28 chr2 41737717 41737862 -208949992 + MIR SINE MIR 119 259 -3 395 356 29 0 chr2 41739745 41739919 -208947935 - MIR SINE MIR -7 255 77 650 188 0 0 chr2 41740459 41740576 -208947278 + FLAM_C SINE Alu 1 117 -26 22 0 0 0 chr2 41740577 41740599 -208947255 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 41740599 41740621 -208947233 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 187 397 43 9 chr2 41740784 41740900 -208946954 - L2 LINE L2 -641 2673 2554 1619 196 7 0 chr2 41741950 41742254 -208945600 + AluJo SINE Alu 1 306 0 238 80 40 40 chr2 41742796 41742846 -208945008 + GA-rich Low_complexity Low_complexity 2 51 0 1826 223 152 49 chr2 41743137 41743730 -208944124 + MLT1E1 LTR MaLR 1 654 0 1158 273 128 36 chr2 41744245 41744785 -208943069 - L2 LINE L2 0 3313 2723 766 279 78 41 chr2 41744965 41745352 -208942502 + L2 LINE L2 2910 3310 -3 683 267 40 0 chr2 41745384 41745534 -208942320 - MER5A DNA MER1_type -33 156 1 225 309 32 63 chr2 41746364 41746490 -208941364 - MIR SINE MIR -78 184 63 182 152 0 0 chr2 41747459 41747492 -208940362 + L2 LINE L2 3018 3050 -222 3340 112 12 2 chr2 41747842 41748334 -208939520 + LOR1a LTR ERV1 1 497 0 22 0 0 0 chr2 41749048 41749070 -208938784 + AT_rich Low_complexity Low_complexity 1 22 0 188 267 167 83 chr2 41749710 41749890 -208937964 - MIR SINE MIR 0 262 68 1318 196 55 41 chr2 41750208 41750499 -208937355 + AluJo SINE Alu 1 295 -17 23 0 0 0 chr2 41750883 41750906 -208936948 + AT_rich Low_complexity Low_complexity 1 23 0 249 286 94 37 chr2 41751904 41752149 -208935705 + L1ME4a LINE L1 5561 5819 -302 364 319 84 11 chr2 41752351 41752542 -208935312 + L1ME4a LINE L1 5902 6106 -15 21 36 0 0 chr2 41752838 41752866 -208934988 + AT_rich Low_complexity Low_complexity 1 28 0 2046 137 3 0 chr2 41753893 41754192 -208933662 + AluSx SINE Alu 9 308 -4 246 336 9 0 chr2 41755235 41755345 -208932509 + (TA)n Simple_repeat Simple_repeat 1 111 0 218 0 0 87 chr2 41756036 41756082 -208931772 + (TA)n Simple_repeat Simple_repeat 2 43 0 222 37 0 0 chr2 41756159 41756186 -208931668 + (CA)n Simple_repeat Simple_repeat 2 28 0 292 255 20 20 chr2 41756212 41756310 -208931544 - L1ME LINE L1 -254 5867 5770 767 257 16 0 chr2 41756675 41756858 -208930996 + MER5A DNA MER1_type 2 187 -2 219 188 0 0 chr2 41757372 41757420 -208930434 + (TA)n Simple_repeat Simple_repeat 2 49 0 495 218 12 8 chr2 41758260 41758509 -208929345 + GA-rich Low_complexity Low_complexity 1 250 0 896 186 69 20 chr2 41760188 41760392 -208927462 + MER20 DNA MER1_type 1 214 -5 230 56 28 0 chr2 41760672 41760708 -208927146 + (TG)n Simple_repeat Simple_repeat 1 37 0 229 242 45 0 chr2 41761880 41761946 -208925908 - HAL1b LINE L1 -276 1072 1004 21 0 0 0 chr2 41762370 41762391 -208925463 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 41762978 41763007 -208924847 + (A)n Simple_repeat Simple_repeat 1 29 0 289 308 26 0 chr2 41763336 41763414 -208924440 + MIR SINE MIR 168 247 -15 207 304 0 51 chr2 41763837 41763916 -208923938 + MER5B DNA MER1_type 7 81 -97 21 0 0 0 chr2 41764807 41764828 -208923026 + AT_rich Low_complexity Low_complexity 1 21 0 237 203 68 0 chr2 41764964 41765023 -208922831 - L1ME LINE L1 -2042 5766 5704 1917 181 68 32 chr2 41766051 41766493 -208921361 + LTR2B LTR ERV1 32 489 -1 211 341 12 0 chr2 41767499 41767581 -208920273 + L2 LINE L2 2892 2974 -298 261 83 0 0 chr2 41767797 41767833 -208920021 + (A)n Simple_repeat Simple_repeat 1 36 0 3641 125 58 3 chr2 41768199 41768801 -208919053 + MER41B LTR ERV1 1 635 0 672 183 16 8 chr2 41770298 41770424 -208917430 - FLAM_C SINE Alu -6 127 1 21 0 0 0 chr2 41772615 41772636 -208915218 + AT_rich Low_complexity Low_complexity 1 21 0 289 222 38 162 chr2 41773204 41773313 -208914541 + MIR3 SINE MIR 17 95 -113 1970 128 3 0 chr2 41773313 41773595 -208914259 - AluSx SINE Alu -29 283 1 289 222 38 162 chr2 41773595 41773670 -208914184 + MIR3 SINE MIR 95 178 -30 193 314 157 0 chr2 41773927 41773997 -208913857 + L2 LINE L2 3184 3264 -8 36 62 0 0 chr2 41776764 41776828 -208911026 + AT_rich Low_complexity Low_complexity 1 64 0 488 138 85 0 chr2 41776836 41776930 -208910924 - L1MA8 LINE L1 -42 6249 6148 214 316 132 23 chr2 41777024 41777198 -208910656 - MIR SINE MIR -50 212 20 229 273 18 0 chr2 41777378 41777433 -208910421 - MARNA DNA Mariner -395 191 136 187 286 0 0 chr2 41777488 41777530 -208910324 + L2 LINE L2 3215 3256 -16 263 291 15 45 chr2 41777664 41777798 -208910056 + L1ME LINE L1 5588 5717 -404 356 329 36 16 chr2 41778128 41778380 -208909474 - MIR SINE MIR -3 259 3 1238 61 18 0 chr2 41779135 41779298 -208908556 - L1PA4 LINE L1 -4 6151 5986 3586 17 0 2 chr2 41779298 41779708 -208908146 + L1PA4 LINE L1 5459 5867 -288 228 336 48 10 chr2 41780661 41780765 -208907089 - L3 LINE CR1 -627 950 843 1597 94 49 130 chr2 41781945 41782089 -208905765 + AluSx SINE Alu 21 128 -184 477 0 0 0 chr2 41782089 41782142 -208905712 + (CA)n Simple_repeat Simple_repeat 2 54 0 1597 94 49 130 chr2 41782142 41782305 -208905549 + AluSx SINE Alu 128 303 -9 456 187 0 0 chr2 41782388 41782463 -208905391 - MER94 DNA DNA -59 75 1 444 127 25 13 chr2 41783029 41783108 -208904746 - MADE1 DNA Mariner 0 80 1 954 103 7 19 chr2 41783390 41783545 -208904309 - L1PA15 LINE L1 -2 6163 6011 1054 159 0 0 chr2 41783729 41783892 -208903962 - AluJb SINE Alu -3 309 147 232 348 0 14 chr2 41783892 41783961 -208903893 - MIR SINE MIR -188 74 7 225 0 0 0 chr2 41784100 41784125 -208903729 + (CA)n Simple_repeat Simple_repeat 2 26 0 273 414 29 0 chr2 41785286 41785426 -208902428 + L2 LINE L2 3129 3272 0 443 295 7 0 chr2 41785673 41785812 -208902042 + CT-rich Low_complexity Low_complexity 1 140 0 525 238 63 0 chr2 41787106 41787232 -208900622 + MIR SINE MIR 56 189 -73 428 237 0 6 chr2 41787285 41787454 -208900400 + (CCA)n Simple_repeat Simple_repeat 1 168 0 285 285 66 16 chr2 41787490 41787635 -208900219 - MIR SINE MIR -55 153 2 316 295 230 7 chr2 41789080 41789219 -208898635 + MIR SINE MIR 50 219 -43 26 50 0 0 chr2 41791515 41791555 -208896299 + AT_rich Low_complexity Low_complexity 1 40 0 982 47 0 0 chr2 41792077 41792204 -208895650 + L1P4 LINE L1 5614 5740 -428 222 118 0 0 chr2 41793720 41793754 -208894100 + (TCCC)n Simple_repeat Simple_repeat 1 34 0 270 0 0 0 chr2 41794653 41794683 -208893171 + (CA)n Simple_repeat Simple_repeat 1 30 0 1037 262 97 44 chr2 41798400 41798631 -208889223 - L2 LINE L2 0 3313 3096 246 81 0 0 chr2 41798631 41798668 -208889186 + (TG)n Simple_repeat Simple_repeat 2 38 0 1037 262 97 44 chr2 41798668 41799082 -208888772 - L2 LINE L2 -217 3096 2632 330 276 59 46 chr2 41799333 41799485 -208888369 + L2 LINE L2 2664 2817 -497 230 204 93 0 chr2 41799770 41799824 -208888030 - MER91C DNA MER1_type -53 87 29 410 303 45 0 chr2 41799826 41799958 -208887896 - MIR SINE MIR -78 184 47 595 236 22 87 chr2 41801966 41802004 -208885850 + L2 LINE L2 3099 3138 -175 1718 136 61 41 chr2 41802004 41802299 -208885555 - AluSq SINE Alu -12 301 1 595 236 22 87 chr2 41802299 41802489 -208885365 + L2 LINE L2 3138 3312 -1 518 276 84 42 chr2 41803182 41803396 -208884458 - MIR SINE MIR 0 262 40 340 323 62 31 chr2 41804662 41804792 -208883062 - L2 LINE L2 -1 3271 3138 418 289 108 6 chr2 41804926 41805092 -208882762 - MER5A DNA MER1_type 0 189 7 402 351 38 0 chr2 41806702 41806833 -208881021 - L2 LINE L2 0 3272 3137 8156 112 20 8 chr2 41806862 41808196 -208879658 + L1PA8 LINE L1 3841 5190 -956 655 76 0 42 chr2 41808195 41808274 -208879580 - L1P4 LINE L1 -377 5778 5713 * 1390 36 0 0 chr2 41808274 41808439 -208879415 + L1PA3 LINE L1 5988 6152 -3 655 76 0 42 chr2 41808439 41808488 -208879366 - L1P4 LINE L1 -442 5713 5664 6314 95 4 8 chr2 41808509 41809507 -208878347 + L1PA8 LINE L1 5172 6165 -7 346 315 102 8 chr2 41809902 41810029 -208877825 + MIR3 SINE MIR 27 165 -43 234 320 23 81 chr2 41810257 41810284 -208877570 - MIR3 SINE MIR -26 182 155 1778 164 10 23 chr2 41810284 41810588 -208877266 + AluJo SINE Alu 1 300 -12 234 320 23 81 chr2 41810588 41810732 -208877122 - MIR3 SINE MIR -53 155 21 1081 261 56 0 chr2 41810817 41811123 -208876731 + MER58B DNA MER1_type 1 323 -18 503 275 34 17 chr2 41811270 41811448 -208876406 - MIR SINE MIR 0 262 82 450 274 51 40 chr2 41862487 41862662 -208825192 - MER5B DNA MER1_type 0 178 2 865 124 16 163 chr2 41863142 41863399 -208824455 + L1MA10 LINE L1 6106 6324 -10 249 220 140 60 chr2 41863464 41863564 -208824290 + MIR SINE MIR 42 149 -113 353 290 67 67 chr2 41863628 41863897 -208823957 + L1ME4a LINE L1 5617 5885 -236 233 237 68 76 chr2 41864151 41864269 -208823585 + L1ME4a LINE L1 6003 6119 -2 282 164 0 0 chr2 41864294 41864349 -208823505 + (TA)n Simple_repeat Simple_repeat 2 56 0 287 338 23 44 chr2 41865374 41865558 -208822296 + MER5A DNA MER1_type 5 188 -1 377 278 104 0 chr2 41866539 41866654 -208821200 + MIR SINE MIR 126 252 -10 260 283 86 46 chr2 41868546 41868698 -208819156 - L2 LINE L2 0 3313 3156 218 168 42 42 chr2 41868775 41868870 -208818984 + (TTATA)n Simple_repeat Simple_repeat 3 97 0 1805 182 55 3 chr2 41869084 41869431 -208818423 + MLT1A1 LTR MaLR 1 365 0 417 313 17 68 chr2 41869846 41870022 -208817832 + MER91B DNA MER1_type 20 186 -4 201 194 60 0 chr2 41870186 41870204 -208817650 + A-rich Low_complexity Low_complexity 3 18 -55 2137 111 3 0 chr2 41870204 41870492 -208817362 + AluSx SINE Alu 1 289 -23 201 194 60 0 chr2 41870492 41870540 -208817314 + A-rich Low_complexity Low_complexity 18 73 0 525 280 103 73 chr2 41871496 41872282 -208815572 - L2 LINE L2 -198 3115 2201 21 36 0 0 chr2 41872425 41872453 -208815401 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 41872618 41872646 -208815208 + AT_rich Low_complexity Low_complexity 1 28 0 199 294 10 39 chr2 41872808 41872910 -208814944 + L2 LINE L2 1732 1830 -1484 460 305 111 11 chr2 41873933 41874123 -208813731 - MIR SINE MIR -43 219 11 1963 149 3 0 chr2 41876093 41876389 -208811465 + AluSp SINE Alu 1 297 -16 5254 189 9 3 chr2 41876406 41877350 -208810504 - MSTB-int LTR MaLR -701 950 1 2171 185 37 0 chr2 41877350 41877760 -208810094 - MSTB LTR MaLR 0 426 2 457 179 0 0 chr2 41877840 41877918 -208809936 - AluJ/FLAM SINE Alu -234 78 1 342 209 100 33 chr2 41878011 41878221 -208809633 - L1M4 LINE L1 -3084 3062 2839 514 114 13 0 chr2 41878600 41878679 -208809175 - MADE1 DNA Mariner 0 80 1 1507 206 63 15 chr2 41880544 41880879 -208806975 - MLT1A1 LTR MaLR 0 365 15 2016 188 43 10 chr2 41880919 41881333 -208806521 - MSTA LTR MaLR 0 428 1 420 243 221 7 chr2 41881440 41881580 -208806274 + MIR SINE MIR 76 245 -17 1674 146 52 45 chr2 41882247 41882556 -208805298 - AluJb SINE Alu -1 311 1 1974 100 3 44 chr2 41883787 41884106 -208803748 - L1MA1 LINE L1 0 6302 5997 231 219 0 0 chr2 41886000 41886041 -208801813 + L2 LINE L2 3263 3303 -10 251 235 94 35 chr2 41886419 41886504 -208801350 + L2 LINE L2 3222 3311 -2 377 315 51 19 chr2 41887356 41887613 -208800241 + L1ME LINE L1 5479 5743 -378 25 0 0 0 chr2 41887631 41887656 -208800198 + AT_rich Low_complexity Low_complexity 1 25 0 1040 295 32 32 chr2 41887937 41888629 -208799225 + L1ME1 LINE L1 2646 3337 -2809 * 2210 241 119 27 chr2 41888628 41890166 -208797688 + L1ME1 LINE L1 4490 6159 -7 698 282 75 31 chr2 41890226 41890928 -208796926 + L1ME3A LINE L1 4733 5654 -516 318 339 48 43 chr2 41890930 41891116 -208796738 - MER63A DNA MER1_type -2 208 22 601 251 104 86 chr2 41891116 41891560 -208796294 + L1ME3A LINE L1 5668 6119 -2 674 253 18 0 chr2 41891591 41891761 -208796093 - L1ME3A LINE L1 -331 5839 5667 504 269 32 19 chr2 41891865 41892021 -208795833 + MIR SINE MIR 33 190 -72 204 203 34 0 chr2 41892897 41892956 -208794898 + T-rich Low_complexity Low_complexity 4 64 0 1705 193 65 3 chr2 41893038 41893422 -208794432 + L1MB4 LINE L1 5486 5893 -287 492 298 34 11 chr2 41893621 41893799 -208794055 + MIR SINE MIR 3 184 -78 242 194 16 0 chr2 41893801 41893863 -208793991 + (TA)n Simple_repeat Simple_repeat 2 64 0 532 327 42 12 chr2 41894179 41894530 -208793324 - L1ME LINE L1 -403 5767 5401 685 99 45 9 chr2 41895889 41896000 -208791854 - L1PA15 LINE L1 0 6165 6051 401 117 0 0 chr2 41896954 41897014 -208790840 - Alu SINE Alu 0 302 243 30 27 0 0 chr2 41897279 41897316 -208790538 + AT_rich Low_complexity Low_complexity 1 37 0 1209 217 74 19 chr2 41897955 41898278 -208789576 - MER2 DNA MER2_type 0 345 5 449 159 0 25 chr2 41898766 41898929 -208788925 + (TA)n Simple_repeat Simple_repeat 2 160 0 1891 155 3 0 chr2 41899148 41899444 -208788410 + AluSx SINE Alu 2 298 -14 313 304 76 8 chr2 41899858 41900046 -208787808 - L1ME3A LINE L1 -637 5541 5343 1553 202 3 10 chr2 41900124 41900426 -208787428 - AluJo SINE Alu -8 304 5 261 290 50 0 chr2 41900575 41900675 -208787179 - L1MEd LINE L1 -5041 1078 974 22 0 0 0 chr2 41900692 41900714 -208787140 + AT_rich Low_complexity Low_complexity 1 22 0 327 261 54 69 chr2 41900943 41901073 -208786781 - L1ME3A LINE L1 -1 6169 6042 1843 226 60 45 chr2 41903041 41903573 -208784281 + MLT1E2 LTR MaLR 63 602 -24 26 0 0 0 chr2 41905332 41905358 -208782496 + AT_rich Low_complexity Low_complexity 1 26 0 193 356 68 0 chr2 41906506 41906565 -208781289 - L2 LINE L2 -74 3198 3136 766 303 37 8 chr2 41907371 41907612 -208780242 + MIR SINE MIR 15 262 0 494 291 0 0 chr2 41907950 41908084 -208779770 + L2 LINE L2 1864 1997 -1317 216 328 89 62 chr2 41908114 41908483 -208779371 - L3 LINE CR1 -105 1472 1094 243 379 33 13 chr2 41909704 41909857 -208777997 + L3 LINE CR1 1421 1576 -1 943 299 163 55 chr2 41910082 41910450 -208777404 - L1M4 LINE L1 -1911 4235 3908 1455 219 28 14 chr2 41910450 41910733 -208777121 - AluJo SINE Alu -21 291 5 943 299 163 55 chr2 41910733 41911693 -208776161 - L1M4 LINE L1 -2238 3908 2763 2223 85 0 23 chr2 41911802 41912109 -208775745 + AluSg SINE Alu 1 300 -10 594 323 94 52 chr2 41914032 41914534 -208773320 + L2 LINE L2 1234 1756 -1558 343 344 51 28 chr2 41914981 41915196 -208772658 + L2 LINE L2 1753 1972 -1342 943 287 32 56 chr2 41915291 41915723 -208772131 + L2 LINE L2 1892 2313 -1001 405 313 8 15 chr2 41915700 41915831 -208772023 + L2 LINE L2 3182 3311 -2 * 393 75 0 0 chr2 41916065 41916118 -208771736 + (TG)n Simple_repeat Simple_repeat 2 54 0 21 36 0 0 chr2 41916652 41916680 -208771174 + AT_rich Low_complexity Low_complexity 1 28 0 38 81 0 0 chr2 41916721 41916808 -208771046 + AT_rich Low_complexity Low_complexity 1 87 0 4889 164 51 1 chr2 41917050 41918067 -208769787 + L1PA15 LINE L1 5103 6158 -7 1451 199 3 34 chr2 41918148 41918444 -208769410 + AluJo SINE Alu 5 291 -21 296 336 72 16 chr2 41918562 41918687 -208769167 + MIR3 SINE MIR 38 169 -39 24 85 0 0 chr2 41921840 41921899 -208765955 + AT_rich Low_complexity Low_complexity 1 59 0 400 270 40 20 chr2 41922811 41922959 -208764895 + HAL1 LINE L1 2 152 -2355 541 158 20 20 chr2 41922961 41923062 -208764792 + FRAM SINE Alu 66 166 -10 295 338 112 44 chr2 41923082 41923467 -208764387 + HAL1 LINE L1 186 596 -1911 1638 201 23 51 chr2 41923483 41923876 -208763978 + MLT1B LTR MaLR 9 390 0 219 384 151 0 chr2 41924357 41924503 -208763351 - MIR3 SINE MIR -1 207 40 1717 199 73 25 chr2 41924793 41925201 -208762653 + MSTA LTR MaLR 1 428 0 390 91 0 0 chr2 41925897 41925952 -208761902 + (TG)n Simple_repeat Simple_repeat 2 56 0 2032 157 6 0 chr2 41926041 41926397 -208761457 + L1PA16 LINE L1 5805 6162 -4 241 280 180 10 chr2 41926896 41926996 -208760858 + MIR SINE MIR 7 123 -139 1982 120 43 0 chr2 41927068 41927367 -208760487 + AluSx SINE Alu 1 312 0 541 303 43 97 chr2 41927429 41927872 -208759982 - L2 LINE L2 -592 2722 2304 23 0 0 0 chr2 41928039 41928062 -208759792 + AT_rich Low_complexity Low_complexity 1 23 0 336 299 35 33 chr2 41928410 41928608 -208759246 - MIR SINE MIR -27 235 43 245 188 0 31 chr2 41928841 41928905 -208758949 - LTR66 LTR ERVL -175 435 374 413 291 151 11 chr2 41928909 41929180 -208758674 - L2 LINE L2 -38 3275 2967 749 214 83 18 chr2 41929181 41929349 -208758505 - MER5A DNA MER1_type -8 181 3 796 313 138 3 chr2 41929459 41929785 -208758069 - L2 LINE L2 -502 2812 2443 22 0 0 0 chr2 41929851 41929873 -208757981 + AT_rich Low_complexity Low_complexity 1 22 0 25 75 0 0 chr2 41930778 41930831 -208757023 + AT_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr2 41930966 41930988 -208756866 + AT_rich Low_complexity Low_complexity 1 22 0 229 340 133 0 chr2 41931718 41931868 -208755986 + MIR SINE MIR 74 243 -19 220 371 113 0 chr2 41932483 41932607 -208755247 + L2 LINE L2 3134 3271 -1 22 35 0 0 chr2 41933577 41933606 -208754248 + AT_rich Low_complexity Low_complexity 1 29 0 26 50 0 0 chr2 41934244 41934284 -208753570 + AT_rich Low_complexity Low_complexity 1 40 0 387 41 0 0 chr2 41935612 41935661 -208752193 + (TG)n Simple_repeat Simple_repeat 1 49 0 395 78 16 0 chr2 41935663 41935727 -208752127 + (GA)n Simple_repeat Simple_repeat 2 66 0 41 0 0 0 chr2 41936703 41936744 -208751110 + AT_rich Low_complexity Low_complexity 1 41 0 193 372 70 12 chr2 41937330 41937416 -208750438 + L2 LINE L2 3139 3229 -43 22 0 0 0 chr2 41937983 41938005 -208749849 + AT_rich Low_complexity Low_complexity 1 22 0 25 75 0 0 chr2 41938158 41938211 -208749643 + AT_rich Low_complexity Low_complexity 1 53 0 1863 79 254 211 chr2 41938491 41939051 -208748803 + LTR12 LTR ERV1 1 584 -130 15152 148 29 26 chr2 41939070 41942234 -208745620 + HERV30 LTR ERV1 42 3228 -5029 6374 96 2 8 chr2 41942241 41943121 -208744733 + HERV30 LTR ERV1 4080 4954 -3445 1338 145 23 43 chr2 41943114 41943562 -208744292 + HERV17 LTR ERV1 706 1219 -5677 * 904 90 0 0 chr2 41943559 41943693 -208744161 + HERV17 LTR ERV1 1592 1725 -5171 * 4526 108 3 0 chr2 41943683 41944324 -208743530 + HERV17 LTR ERV1 7757 8399 0 238 180 0 40 chr2 41944324 41944374 -208743480 + LTR30 LTR ERV1 1 48 -674 2036 71 227 178 chr2 41944374 41944880 -208742974 + LTR12 LTR ERV1 51 581 -133 696 337 40 31 chr2 41945184 41945703 -208742151 + L1M4 LINE L1 2964 3487 -2659 266 352 42 46 chr2 41945962 41946178 -208741676 - L1MEd LINE L1 -5566 553 339 711 265 39 20 chr2 41946224 41946428 -208741426 - MER63A DNA MER1_type 0 210 3 683 325 66 39 chr2 41946435 41946918 -208740936 - L1MEd LINE L1 -5619 500 5 5728 85 0 3 chr2 41947623 41948387 -208739467 - L1PA7 LINE L1 0 6154 5393 * 20590 102 8 2 chr2 41948383 41951440 -208736414 + L1PA7 LINE L1 2321 5396 -750 202 268 42 42 chr2 41952042 41952113 -208735741 + L2 LINE L2 2974 3044 -228 * 253 297 0 0 chr2 41952091 41952155 -208735699 - MER5A DNA MER1_type -114 75 12 1118 308 104 10 chr2 41952641 41953141 -208734713 - MLT1H LTR MaLR -2 547 1 23 33 0 0 chr2 41954798 41954828 -208733026 + AT_rich Low_complexity Low_complexity 1 30 0 2347 161 24 28 chr2 41955493 41955953 -208731901 - L1PB4 LINE L1 -3 6153 5696 535 318 53 0 chr2 41956030 41956200 -208731654 + MIR SINE MIR 78 256 -6 224 336 43 43 chr2 41956370 41956486 -208731368 - L2 LINE L2 -13 3259 3144 223 306 28 0 chr2 41957566 41957638 -208730216 - MER5B DNA MER1_type -7 171 98 1757 133 29 45 chr2 41957797 41958106 -208729748 + AluSq SINE Alu 10 313 0 212 224 104 80 chr2 41958271 41958396 -208729458 - L2 LINE L2 -36 3277 3150 13920 41 10 0 chr2 41958570 41961045 -208726809 + L1PA4 LINE L1 3666 6150 -5 192 313 50 30 chr2 41961263 41961362 -208726492 - MER5A DNA MER1_type -1 188 88 23 54 0 0 chr2 41961596 41961633 -208726221 + AT_rich Low_complexity Low_complexity 1 37 0 3202 81 9 9 chr2 41961957 41962399 -208725455 - L1PA7 LINE L1 -5 6149 5708 1411 192 3 54 chr2 41962491 41962788 -208725066 + AluJo SINE Alu 1 282 -30 468 113 0 12 chr2 41962792 41962872 -208724982 + L1PA13 LINE L1 6084 6162 -1 307 0 23 23 chr2 41963088 41963132 -208724722 + (TC)n Simple_repeat Simple_repeat 1 44 0 * 411 68 0 0 chr2 41963131 41963190 -208724664 + (CA)n Simple_repeat Simple_repeat 1 59 0 937 190 92 35 chr2 41963810 41964125 -208723729 - MER33 DNA MER1_type -4 320 1 186 353 35 0 chr2 41964277 41964362 -208723492 - L2 LINE L2 0 3272 3185 337 304 90 17 chr2 41965035 41965324 -208722530 + L1ME4a LINE L1 5561 5870 -251 * 1605 261 102 33 chr2 41965323 41966259 -208721595 - L1ME3A LINE L1 0 6170 5174 2227 277 89 70 chr2 41966486 41967690 -208720164 - L2 LINE L2 -39 3274 2026 2021 152 0 7 chr2 41967690 41968000 -208719854 + AluSg SINE Alu 1 308 -2 2227 277 89 70 chr2 41968000 41968315 -208719539 - L2 LINE L2 -1287 2026 1719 1688 80 0 0 chr2 41969043 41969267 -208718587 + L1PB1 LINE L1 5928 6151 0 29 28 0 0 chr2 41969384 41969420 -208718434 + AT_rich Low_complexity Low_complexity 1 36 0 542 231 32 54 chr2 41970228 41970414 -208717440 - L2 LINE L2 -7 3306 3125 738 301 81 59 chr2 41971108 41971666 -208716188 - MLT1G LTR MaLR -1 589 20 581 338 65 21 chr2 41971664 41972004 -208715850 + MLT1I LTR MaLR 55 409 0 * 440 357 63 12 chr2 41972881 41973133 -208714721 - L3 LINE CR1 -1 1576 1312 271 298 1 37 chr2 41973269 41973394 -208714460 - L1ME3A LINE L1 -75 6087 5968 728 283 154 17 chr2 41973494 41973903 -208713951 - L1ME3A LINE L1 -214 5948 5483 25 0 0 0 chr2 41973927 41973952 -208713902 + AT_rich Low_complexity Low_complexity 1 25 0 6401 81 14 1 chr2 41974012 41975399 -208712455 - L1PA7 LINE L1 -15 6139 4740 16782 132 139 98 chr2 41975403 41976483 -208711371 - L1PA7 LINE L1 -1769 4377 3343 2235 81 0 11 chr2 41976483 41976798 -208711056 - AluY SINE Alu 0 312 1 16782 132 139 98 chr2 41976798 41979907 -208707947 - L1PA7 LINE L1 -2803 3343 12 33 56 0 0 chr2 41980011 41980065 -208707789 + AT_rich Low_complexity Low_complexity 1 54 0 312 305 25 8 chr2 41980204 41980322 -208707532 - L3 LINE CR1 -498 1079 960 783 94 0 0 chr2 41981409 41981515 -208706339 - L1PA2 LINE L1 -57 6098 5993 218 54 0 27 chr2 41981531 41981568 -208706286 + (TAAAA)n Simple_repeat Simple_repeat 4 39 0 2006 306 28 38 chr2 41982030 41983112 -208704742 - L2 LINE L2 0 3313 2237 1691 246 62 55 chr2 41983454 41984004 -208703850 + MLT2B3 LTR ERVL 1 554 0 277 384 40 8 chr2 41984836 41984961 -208702893 + MIR3 SINE MIR 57 185 -23 1522 187 72 47 chr2 41984962 41985498 -208702356 + MER67C LTR ERV1 1 514 0 789 294 76 54 chr2 41986269 41987247 -208700607 + HAL1 LINE L1 769 1799 -708 355 248 100 43 chr2 41987304 41987534 -208700320 + HAL1b LINE L1 691 933 -415 832 153 25 0 chr2 41987801 41987964 -208699890 + GA-rich Low_complexity Low_complexity 2 168 0 559 363 53 44 chr2 41988560 41989382 -208698472 - MERVL LTR ERVL -1219 4266 3437 260 255 31 20 chr2 41989739 41989837 -208698017 + (TTTA)n Simple_repeat Simple_repeat 4 102 0 1969 147 40 6 chr2 41990680 41991006 -208696848 + MER1B DNA MER1_type 1 337 0 181 285 300 8 chr2 41992941 41993071 -208694783 + MER5A DNA MER1_type 6 173 -16 26 30 0 0 chr2 41993273 41993306 -208694548 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr2 41993793 41993818 -208694036 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr2 41994280 41994327 -208693527 + AT_rich Low_complexity Low_complexity 1 47 0 244 263 23 23 chr2 41994564 41994739 -208693115 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 259 230 46 35 chr2 41994629 41994803 -208693051 + (TTATA)n Simple_repeat Simple_repeat 2 177 0 195 186 14 29 chr2 41995159 41995229 -208692625 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 389 332 68 24 chr2 41995443 41995648 -208692206 - L1ME3A LINE L1 -213 6026 5813 494 304 91 38 chr2 41995763 41996214 -208691640 - L1ME3A LINE L1 -2196 4019 3545 1689 187 40 75 chr2 41996329 41996757 -208691097 - MLT2C2 LTR ERVL -48 416 4 2212 75 4 0 chr2 41996757 41997038 -208690816 + AluY SINE Alu 27 308 -3 331 231 110 35 chr2 41997161 41997451 -208690403 - L1ME3A LINE L1 -2913 3302 2991 198 150 25 0 chr2 41997670 41997710 -208690144 - L2 LINE L2 -5 3308 3268 222 143 0 0 chr2 41997830 41997879 -208689975 + (TG)n Simple_repeat Simple_repeat 2 50 0 335 248 0 30 chr2 41998251 41998273 -208689581 - L1MA10 LINE L1 -66 6268 6247 905 238 54 66 chr2 41998273 41998577 -208689277 - L1ME1 LINE L1 -79 6087 5788 1051 194 138 67 chr2 41998577 41998918 -208688936 + MLT1A1 LTR MaLR 1 365 0 905 238 54 66 chr2 41998918 41999037 -208688817 - L1ME1 LINE L1 -378 5788 5669 451 240 120 17 chr2 41999174 41999349 -208688505 - L1ME3A LINE L1 -5534 862 670 796 277 97 26 chr2 41999361 41999671 -208688183 - L1ME3A LINE L1 -5822 574 243 304 311 44 0 chr2 41999672 41999762 -208688092 - L1ME3A LINE L1 -6211 185 92 26 0 0 0 chr2 42000385 42000411 -208687443 + AT_rich Low_complexity Low_complexity 1 26 0 791 235 36 5 chr2 42000838 42001034 -208686820 - MER3 DNA MER1_type 0 209 8 657 146 81 65 chr2 42001953 42002138 -208685716 - MER53 DNA DNA 0 189 2 1730 215 11 6 chr2 42002380 42002743 -208685111 + MLT1A1 LTR MaLR 1 365 0 592 326 16 52 chr2 42004238 42004603 -208683251 - MLT1J LTR MaLR 0 511 160 572 206 108 77 chr2 42004854 42004936 -208682918 - MIR SINE MIR -21 241 163 2401 157 18 21 chr2 42004936 42005370 -208682484 + Tigger2a DNA MER2_type 2 434 0 572 206 108 77 chr2 42005370 42005481 -208682373 - MIR SINE MIR -99 163 42 24 0 0 0 chr2 42005527 42005551 -208682303 + AT_rich Low_complexity Low_complexity 1 24 0 230 188 156 0 chr2 42005644 42005708 -208682146 - L2 LINE L2 -550 2764 2691 443 362 11 0 chr2 42008160 42008337 -208679517 - ERVL LTR ERVL -4078 1686 1508 263 133 0 17 chr2 42008546 42008606 -208679248 + (TA)n Simple_repeat Simple_repeat 2 60 0 266 164 0 16 chr2 42008846 42008907 -208678947 + (TA)n Simple_repeat Simple_repeat 2 61 0 849 218 32 48 chr2 42008912 42009160 -208678694 - MLT1I LTR MaLR -90 319 76 286 314 48 5 chr2 42010508 42010715 -208677139 - L1MEc LINE L1 -4868 1528 1313 396 103 0 0 chr2 42010855 42010913 -208676941 + (TA)n Simple_repeat Simple_repeat 1 58 0 1037 233 97 50 chr2 42011193 42011597 -208676257 + MLT1C LTR MaLR 45 467 0 387 269 108 93 chr2 42011640 42011919 -208675935 - L1MEc LINE L1 -5397 808 526 496 300 0 0 chr2 42012342 42012482 -208675372 + L1MD2 LINE L1 6202 6341 -18 21 36 0 0 chr2 42012484 42012512 -208675342 + AT_rich Low_complexity Low_complexity 1 28 0 1494 140 34 82 chr2 42012661 42013157 -208674697 + MER51A LTR ERV1 2 634 0 422 315 106 0 chr2 42013189 42013424 -208674430 - MLT1J LTR MaLR -249 262 3 866 106 0 0 chr2 42014806 42014919 -208672935 + AluSq/x SINE Alu 3 115 -198 617 72 0 21 chr2 42014920 42015017 -208672837 + AluY SINE Alu 215 309 -2 1412 115 0 0 chr2 42015017 42015217 -208672637 + AluSx SINE Alu 104 303 -9 22 0 0 0 chr2 42016159 42016181 -208671673 + AT_rich Low_complexity Low_complexity 1 22 0 440 184 35 71 chr2 42017422 42017507 -208670347 + L1MC4 LINE L1 7902 7982 -60 2770 16 0 9 chr2 42017507 42017828 -208670026 - AluYb8 SINE Alu 0 318 1 440 184 35 71 chr2 42017828 42017883 -208669971 + L1MC4 LINE L1 7982 8037 -5 274 339 69 39 chr2 42017946 42018076 -208669778 - MIR3 SINE MIR -72 136 3 263 321 75 0 chr2 42018106 42018240 -208669614 - MIR SINE MIR -109 153 10 435 282 44 103 chr2 42019387 42019795 -208668059 - MLT1J LTR MaLR -32 479 96 719 306 73 53 chr2 42020500 42020898 -208666956 + L2 LINE L2 2907 3312 -1 21 57 0 0 chr2 42021991 42022026 -208665828 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr2 42022685 42022708 -208665146 + (T)n Simple_repeat Simple_repeat 1 23 0 797 82 16 55 chr2 42022898 42023081 -208664773 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 376 152 0 33 chr2 42023090 42023182 -208664672 + CT-rich Low_complexity Low_complexity 3 91 0 1240 185 100 4 chr2 42023182 42023431 -208664423 - AluSx SINE Alu -39 273 1 329 266 76 21 chr2 42023502 42023791 -208664063 - L1ME4a LINE L1 -3 6118 5766 1791 96 16 4 chr2 42024661 42024911 -208662943 + L1PA7 LINE L1 5887 6139 -15 218 254 183 0 chr2 42026333 42026404 -208661450 + L2 LINE L2 3178 3261 -11 213 65 0 0 chr2 42026435 42026466 -208661388 + (CA)n Simple_repeat Simple_repeat 1 31 0 656 225 147 28 chr2 42027651 42027971 -208659883 - L1ME4a LINE L1 -832 5314 4957 400 291 48 39 chr2 42027976 42028239 -208659615 - L1ME4a LINE L1 -1894 4252 3975 1711 160 103 3 chr2 42030094 42030425 -208657429 - THE1B LTR MaLR 0 364 1 288 53 0 0 chr2 42030526 42030564 -208657290 + (TG)n Simple_repeat Simple_repeat 2 39 0 2621 116 62 10 chr2 42032507 42032911 -208654943 + MER83 LTR ERV1 1 425 -23 569 258 122 18 chr2 42035161 42035382 -208652472 - MER112 DNA MER1_type -13 247 4 192 229 29 43 chr2 42035412 42035482 -208652372 - L2 LINE L2 -939 2375 2307 3634 177 81 25 chr2 42035591 42036992 -208650862 - L1MA7 LINE L1 0 6291 4686 662 301 61 9 chr2 42037657 42037870 -208649984 - MIR SINE MIR -26 236 13 467 120 0 13 chr2 42037951 42038026 -208649828 - MADE1 DNA Mariner -5 75 2 2240 104 48 22 chr2 42038168 42038523 -208649331 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr2 42038673 42038694 -208649160 + AT_rich Low_complexity Low_complexity 1 21 0 190 286 0 0 chr2 42038812 42038854 -208649000 + MIR SINE MIR 119 160 -102 425 315 150 9 chr2 42040340 42040553 -208647301 + MIR SINE MIR 6 248 -14 27 73 0 0 chr2 42040927 42040982 -208646872 + AT_rich Low_complexity Low_complexity 1 55 0 205 291 82 73 chr2 42041064 42041174 -208646680 + MIR SINE MIR 34 144 -118 273 286 14 0 chr2 42041242 42041312 -208646542 - L2 LINE L2 -4 3268 3198 2159 282 67 39 chr2 42041497 42042925 -208644929 + L1M4c LINE L1 1060 2542 -3840 8022 155 48 46 chr2 42042943 42044553 -208643301 - Tigger1 DNA MER2_type -804 1614 2 414 0 0 0 chr2 42044582 42044628 -208643226 + (CA)n Simple_repeat Simple_repeat 2 47 0 1838 202 24 30 chr2 42044629 42045094 -208642760 + L1MA6 LINE L1 5832 6293 -7 2174 225 77 25 chr2 42045104 42045939 -208641915 + L1M4c LINE L1 3008 3885 -2497 579 179 66 46 chr2 42045932 42046083 -208641771 + L1M4c LINE L1 4260 4413 -1969 * 3840 194 34 17 chr2 42046080 42046880 -208640974 + L1MA9 LINE L1 5353 6170 -142 351 44 0 0 chr2 42046880 42046925 -208640929 + (CA)n Simple_repeat Simple_repeat 1 45 0 3840 194 34 17 chr2 42046925 42046969 -208640885 + L1MA9 LINE L1 6170 6212 -100 32 43 0 0 chr2 42046983 42047029 -208640825 + AT_rich Low_complexity Low_complexity 1 46 0 11385 31 1 0 chr2 42047486 42049625 -208638229 + L1PA3 LINE L1 4028 6169 0 203 0 0 36 chr2 42051085 42051113 -208636741 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1156 179 91 33 chr2 42052122 42052396 -208635458 - AluJo SINE Alu -11 301 12 703 168 25 117 chr2 42052510 42052707 -208635147 + MLT1D LTR MaLR 1 179 -326 734 237 118 0 chr2 42052740 42052926 -208634928 + MLT1D LTR MaLR 298 505 0 272 257 7 50 chr2 42053631 42053771 -208634083 + L1ME4a LINE L1 5765 5898 -223 1621 176 95 15 chr2 42053788 42054255 -208633599 - Charlie1b DNA MER1_type -6 517 4 338 268 67 61 chr2 42054429 42054593 -208633261 - MIR SINE MIR -4 258 94 244 274 0 0 chr2 42054711 42054773 -208633081 + (TG)n Simple_repeat Simple_repeat 2 63 0 213 132 0 0 chr2 42055374 42055412 -208632442 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 21 57 0 0 chr2 42055752 42055787 -208632067 + AT_rich Low_complexity Low_complexity 1 35 0 2330 60 0 0 chr2 42056140 42056493 -208631361 + AluY SINE Alu 1 353 0 1898 114 12 2 chr2 42057179 42057491 -208630363 + L1P LINE L1 4948 5260 -886 1275 262 68 46 chr2 42058069 42058523 -208629331 - MLT2B1 LTR ERVL -56 464 1 182 309 29 0 chr2 42060144 42060212 -208627642 + L3 LINE CR1 739 808 -769 209 428 12 6 chr2 42061827 42061993 -208625861 + L3 LINE CR1 946 1112 -465 322 71 0 36 chr2 42062120 42062176 -208625678 + (TA)n Simple_repeat Simple_repeat 2 55 0 183 42 0 0 chr2 42062491 42062515 -208625339 + (TG)n Simple_repeat Simple_repeat 1 24 0 397 0 19 19 chr2 42063870 42063924 -208623930 + (CA)n Simple_repeat Simple_repeat 1 54 0 212 273 20 10 chr2 42064208 42064307 -208623547 + G-rich Low_complexity Low_complexity 5 104 0 * 249 245 29 20 chr2 42064292 42064394 -208623460 + (CCCG)n Simple_repeat Simple_repeat 3 105 0 21 36 0 0 chr2 42064394 42064422 -208623432 + GC_rich Low_complexity Low_complexity 1 28 0 758 225 0 22 chr2 42065660 42065842 -208622012 + MER5B DNA MER1_type 1 178 0 185 322 144 0 chr2 42065896 42065986 -208621868 - MER5A DNA MER1_type -77 112 10 226 214 0 0 chr2 42066599 42066655 -208621199 + LTR38 LTR ERV1 20 75 -481 2654 45 0 3 chr2 42068173 42068482 -208619372 + AluY SINE Alu 1 308 -3 658 271 96 25 chr2 42068633 42068873 -208618981 + MIR SINE MIR 6 262 0 186 247 21 118 chr2 42069968 42070061 -208617793 - MIR SINE MIR -73 189 106 518 301 0 35 chr2 42070066 42070239 -208617615 - MER5B DNA MER1_type -11 167 1 186 252 0 0 chr2 42070239 42070276 -208617578 - MIR SINE MIR -111 97 60 682 277 47 35 chr2 42071161 42071417 -208616437 - L2 LINE L2 -4 3309 3051 2104 100 30 13 chr2 42072712 42073011 -208614843 - AluSx SINE Alu -8 304 1 603 236 93 12 chr2 42073402 42073563 -208614291 - MER97a DNA MER1_type? -715 179 6 2295 118 0 0 chr2 42074140 42074445 -208613409 - AluSx SINE Alu -7 305 1 29 101 0 0 chr2 42074457 42074556 -208613298 + AT_rich Low_complexity Low_complexity 1 99 0 1657 180 7 0 chr2 42074665 42074943 -208612911 + AluJo SINE Alu 1 280 -32 263 0 81 0 chr2 42074943 42074980 -208612874 + A-rich Low_complexity Low_complexity 1 40 0 186 345 179 20 chr2 42075075 42075478 -208612376 - L2 LINE L2 0 3313 2847 561 30 0 0 chr2 42075960 42076027 -208611827 + (CA)n Simple_repeat Simple_repeat 2 68 0 2022 136 0 0 chr2 42076053 42076333 -208611521 - AluSx SINE Alu -32 280 1 277 125 25 0 chr2 42076358 42076398 -208611456 - MER57A LTR ERV1 -68 335 295 1857 253 137 9 chr2 42077221 42077850 -208610004 + MER20B DNA MER1_type 6 714 -69 1462 195 55 65 chr2 42077882 42078282 -208609572 + MSTD LTR MaLR 1 396 0 218 269 167 0 chr2 42078644 42078722 -208609132 + MIR SINE MIR 57 147 -61 352 325 8 26 chr2 42080080 42080197 -208607657 + MIR3 SINE MIR 84 198 -10 402 289 21 7 chr2 42080782 42080924 -208606930 - L1MC5 LINE L1 -51 7910 7767 701 199 0 34 chr2 42080933 42081079 -208606775 + FLAM_A SINE Alu 1 141 -1 419 244 59 118 chr2 42081085 42081331 -208606523 - L1MC5 LINE L1 -189 7772 7513 1544 174 191 6 chr2 42081331 42081692 -208606162 + MSTA LTR MaLR 1 428 0 419 244 59 118 chr2 42081692 42082192 -208605662 - L1MC5 LINE L1 -448 7513 7070 400 268 86 75 chr2 42082386 42082930 -208604924 + L1ME4a LINE L1 5544 6093 -28 29 28 0 0 chr2 42082930 42082966 -208604888 + AT_rich Low_complexity Low_complexity 1 36 0 210 250 250 54 chr2 42083300 42083448 -208604406 - MIR SINE MIR -73 189 13 589 233 8 31 chr2 42084677 42084806 -208603048 - FLAM_C SINE Alu -7 126 1 318 310 40 0 chr2 42084806 42084906 -208602948 - L2 LINE L2 -14 3299 3196 283 357 202 6 chr2 42085264 42085432 -208602422 + L3 LINE CR1 1119 1319 -258 464 301 99 34 chr2 42085467 42085759 -208602095 + L2 LINE L2 3003 3313 0 219 368 103 0 chr2 42085911 42086047 -208601807 - L3 LINE CR1 -111 1466 1317 434 287 23 0 chr2 42086762 42086891 -208600963 - MIR SINE MIR -31 231 100 688 174 47 61 chr2 42087219 42087261 -208600593 - Charlie1 DNA MER1_type 0 2761 2720 2385 56 0 0 chr2 42087261 42087571 -208600283 - AluY SINE Alu 0 310 1 688 174 47 61 chr2 42087571 42087739 -208600115 - Charlie1 DNA MER1_type -41 2720 2553 294 163 43 22 chr2 42087742 42087834 -208600020 + (CATATA)n Simple_repeat Simple_repeat 2 95 0 497 316 90 35 chr2 42088540 42088982 -208598872 - L2 LINE L2 -123 3190 2722 193 308 0 0 chr2 42089488 42089540 -208598314 + MIR SINE MIR 93 144 -64 226 181 14 14 chr2 42089837 42089909 -208597945 + (TG)n Simple_repeat Simple_repeat 2 73 0 2437 79 0 0 chr2 42090905 42091210 -208596644 - AluSq SINE Alu -8 305 1 1591 211 37 8 chr2 42092386 42092741 -208595113 + MLT1A1 LTR MaLR 1 365 0 183 167 0 0 chr2 42093244 42093286 -208594568 + (TG)n Simple_repeat Simple_repeat 1 42 0 440 322 58 40 chr2 42093466 42093640 -208594214 + MIR SINE MIR 8 184 -78 305 336 43 9 chr2 42094089 42094205 -208593649 - MER5A DNA MER1_type -9 180 61 491 182 0 0 chr2 42094217 42094305 -208593549 - L1MB1 LINE L1 -1 6167 6080 289 203 31 0 chr2 42094459 42094523 -208593331 - MER69 DNA AcHobo 0 2526 2461 532 231 25 0 chr2 42094529 42094650 -208593204 - MER69 DNA AcHobo -2377 149 26 692 207 15 7 chr2 42094690 42094825 -208593029 - MIR SINE MIR -107 155 20 2350 48 0 45 chr2 42094928 42095242 -208592612 - AluY SINE Alu -11 300 1 32 95 0 0 chr2 42095347 42095442 -208592412 + AT_rich Low_complexity Low_complexity 1 95 0 1242 245 141 43 chr2 42095681 42096142 -208591712 + MLT1J LTR MaLR 6 511 0 237 291 94 31 chr2 42096214 42096341 -208591513 - MARNA DNA Mariner -17 569 435 2278 105 55 19 chr2 42098084 42098446 -208589408 + THE1C LTR MaLR 1 375 0 1357 31 0 0 chr2 42098861 42099023 -208588831 - L1PA5 LINE L1 0 6154 5993 1158 86 0 0 chr2 42099023 42099175 -208588679 + L1PA5 LINE L1 5836 5987 -167 210 143 0 0 chr2 42100591 42100626 -208587228 + (TG)n Simple_repeat Simple_repeat 2 36 0 422 310 49 40 chr2 42101160 42101386 -208586468 - MIR SINE MIR -1 261 34 205 200 40 40 chr2 42103236 42103286 -208584568 - L3 LINE CR1 -13 1564 1515 5517 28 8 0 chr2 42103306 42103959 -208583895 - L1PA3 LINE L1 -1677 4469 3812 * 7676 32 1 0 chr2 42103956 42105660 -208582194 + L1PA3 LINE L1 4464 6167 0 1167 119 0 0 chr2 42105789 42105949 -208581905 - AluSg/x SINE Alu -8 304 145 272 137 20 0 chr2 42106029 42106080 -208581774 + CT-rich Low_complexity Low_complexity 3 54 0 210 37 0 0 chr2 42106254 42106281 -208581573 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1838 28 0 0 chr2 42106501 42106719 -208581135 - L1P1 LINE L1 -360 5795 5578 514 48 0 0 chr2 42106719 42106779 -208581075 + L1PA5 LINE L1 6077 6139 -15 396 0 0 0 chr2 42106779 42106823 -208581031 + (TA)n Simple_repeat Simple_repeat 2 45 0 244 271 39 70 chr2 42107005 42107134 -208580720 - MIR SINE MIR -34 228 104 240 340 85 14 chr2 42107809 42107950 -208579904 - MIR3 SINE MIR -41 167 17 225 130 22 22 chr2 42108087 42108133 -208579721 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 2557 7 0 0 chr2 42108934 42109223 -208578631 + L1PA2 LINE L1 5864 6152 -3 351 331 47 16 chr2 42109432 42109559 -208578295 - L2 LINE L2 -8 3305 3175 402 344 125 47 chr2 42109719 42110374 -208577480 - L2 LINE L2 -337 2977 2272 546 319 171 36 chr2 42110504 42111031 -208576823 + L3 LINE CR1 256 853 -724 200 356 94 59 chr2 42111102 42111304 -208576550 + L3 LINE CR1 1116 1324 -253 894 233 85 5 chr2 42111361 42111584 -208576270 + MIR SINE MIR 1 241 -21 261 219 0 0 chr2 42112197 42112261 -208575593 + L1MA9 LINE L1 6226 6289 -23 198 0 0 0 chr2 42112268 42112290 -208575564 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 278 238 30 30 chr2 42112478 42112579 -208575275 - MER103 DNA DNA -3 163 63 408 300 0 0 chr2 42112772 42112902 -208574952 - MER94 DNA DNA 0 134 5 261 0 0 0 chr2 42112934 42112963 -208574891 + (T)n Simple_repeat Simple_repeat 1 29 0 578 316 132 9 chr2 42112965 42113385 -208574469 + L2 LINE L2 2650 3120 -193 285 305 95 11 chr2 42114535 42114630 -208573224 + L2 LINE L2 3168 3270 -2 222 263 138 0 chr2 42114628 42114708 -208573146 - MIR SINE MIR 0 262 172 * 675 251 65 11 chr2 42115065 42115284 -208572570 + L1ME3A LINE L1 5928 6164 -6 6532 155 8 6 chr2 42115562 42117262 -208570592 + L1MA1 LINE L1 4106 5809 -493 2409 86 37 0 chr2 42117272 42117622 -208570232 + L1MA1 LINE L1 5933 6295 -7 23 54 0 0 chr2 42117623 42117660 -208570194 + AT_rich Low_complexity Low_complexity 1 37 0 263 230 16 111 chr2 42118144 42118270 -208569584 + MER103 DNA DNA 51 164 -2 730 261 64 5 chr2 42119773 42119961 -208567893 + MIR SINE MIR 53 251 -11 259 326 67 11 chr2 42119972 42120061 -208567793 - MIR SINE MIR -155 107 14 423 274 163 20 chr2 42120972 42121125 -208566729 - MER5B DNA MER1_type -1 177 3 234 0 0 0 chr2 42121576 42121602 -208566252 + (T)n Simple_repeat Simple_repeat 1 26 0 2053 86 0 57 chr2 42121950 42122264 -208565590 - AluSc SINE Alu -13 296 1 23 0 0 0 chr2 42122273 42122296 -208565558 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 42124819 42124839 -208563015 + (T)n Simple_repeat Simple_repeat 1 20 0 224 222 0 0 chr2 42125039 42125084 -208562770 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 22 0 0 0 chr2 42125301 42125323 -208562531 + AT_rich Low_complexity Low_complexity 1 22 0 331 274 98 0 chr2 42125736 42125889 -208561965 + L1MC5 LINE L1 7759 7926 -35 380 317 57 63 chr2 42126306 42126640 -208561214 + MLT1L LTR MaLR 211 542 -73 220 355 13 0 chr2 42126673 42126749 -208561105 + MIR SINE MIR 26 102 -160 229 139 0 0 chr2 42127211 42127247 -208560607 - tRNA-Gly-GGA tRNA tRNA -39 36 1 345 339 40 24 chr2 42127709 42127833 -208560021 + L2 LINE L2 3147 3272 0 7393 208 29 43 chr2 42128542 42131251 -208556603 - L1MB8 LINE L1 -289 5889 3226 638 243 44 106 chr2 42131276 42131943 -208555911 - L1M4 LINE L1 -3736 3221 2610 1149 248 86 10 chr2 42131984 42132762 -208555092 - L1M4 LINE L1 -4442 2696 1603 2002 311 72 27 chr2 42132770 42133663 -208554191 - L1M4 LINE L1 -5916 943 11 209 343 30 0 chr2 42133906 42133973 -208553881 - MIR SINE MIR -68 140 72 1585 196 6 13 chr2 42134478 42134844 -208553010 + L1PB4 LINE L1 5847 6210 0 2117 209 107 5 chr2 42135098 42135878 -208551976 - L1MC/D LINE L1 -427 6209 5360 673 289 15 8 chr2 42135880 42136140 -208551714 - L1MC/D LINE L1 -2488 4052 3791 8628 228 73 32 chr2 42136147 42138997 -208548857 - L1MDa LINE L1 -3519 3021 16 2092 97 0 62 chr2 42139260 42139569 -208548285 + AluSg SINE Alu 1 290 -20 720 212 0 0 chr2 42139650 42139782 -208548072 + FLAM_A SINE Alu 1 132 -1 44 46 0 0 chr2 42139943 42140008 -208547846 + AT_rich Low_complexity Low_complexity 1 65 0 261 325 103 57 chr2 42140315 42140752 -208547102 + L2 LINE L2 2155 2611 -703 3268 74 2 2 chr2 42141008 42141512 -208546342 - L1PA7 LINE L1 -468 5686 5183 3280 73 0 13 chr2 42141512 42141943 -208545911 + L1PA7 LINE L1 5710 6153 -1 236 250 0 0 chr2 42142339 42142387 -208545467 + GA-rich Low_complexity Low_complexity 4 51 0 286 250 210 20 chr2 42142395 42142495 -208545359 + MER5B DNA MER1_type 60 178 0 229 216 0 0 chr2 42143654 42143705 -208544149 - L1M4 LINE L1 -917 5229 5179 440 327 122 42 chr2 42143782 42144118 -208543736 - L2 LINE L2 -528 2786 2424 231 36 0 0 chr2 42144118 42144146 -208543708 + (CAATA)n Simple_repeat Simple_repeat 2 29 0 1668 115 0 8 chr2 42144178 42144413 -208543441 - AluSg SINE Alu -75 235 3 23 0 0 0 chr2 42144424 42144447 -208543407 + AT_rich Low_complexity Low_complexity 1 23 0 197 295 66 57 chr2 42144641 42144763 -208543091 - L2 LINE L2 -309 2963 2841 910 169 82 68 chr2 42149758 42149965 -208537889 - AluJb SINE Alu -16 296 87 260 272 26 92 chr2 42150326 42150462 -208537392 - MIR SINE MIR -75 133 50 23 0 0 0 chr2 42150906 42150929 -208536925 + AT_rich Low_complexity Low_complexity 1 23 0 1586 164 7 41 chr2 42150979 42151135 -208536719 - AluJo SINE Alu -30 282 139 2281 79 0 30 chr2 42151135 42151440 -208536414 - AluY SINE Alu -15 296 1 1586 164 7 41 chr2 42151440 42151575 -208536279 - AluJo SINE Alu -173 139 1 225 0 0 0 chr2 42152005 42152030 -208535824 + (A)n Simple_repeat Simple_repeat 1 25 0 303 28 0 0 chr2 42152890 42152926 -208534928 + (TA)n Simple_repeat Simple_repeat 1 36 0 232 356 60 28 chr2 42153068 42153352 -208534502 + L2 LINE L2 2591 2883 -431 265 289 52 21 chr2 42153371 42153468 -208534386 + MER103 DNA DNA 66 165 -1 1387 142 78 0 chr2 42153586 42153818 -208534036 - AluSx SINE Alu -1 311 62 1525 152 3 95 chr2 42153927 42154263 -208533591 + AluJo SINE Alu 1 305 -7 2037 136 7 3 chr2 42154270 42154579 -208533275 + AluSg SINE Alu 1 310 0 1749 170 0 29 chr2 42154688 42155000 -208532854 - AluSx SINE Alu -9 303 1 284 354 102 81 chr2 42155246 42155568 -208532286 + L2 LINE L2 2925 3253 -19 234 305 8 85 chr2 42156007 42156125 -208531729 + MIR SINE MIR 16 124 -84 3031 161 47 69 chr2 42156345 42157052 -208530802 - LTR8 LTR ERV1 0 691 1 816 316 57 38 chr2 42157476 42157929 -208529925 + LTR33 LTR ERVL 10 471 -50 2180 97 7 0 chr2 42158215 42158504 -208529350 + AluSp SINE Alu 4 294 -19 384 22 0 0 chr2 42158512 42158557 -208529297 + (CA)n Simple_repeat Simple_repeat 2 46 0 409 370 63 55 chr2 42158715 42159454 -208528400 + L2 LINE L2 2533 3268 -4 192 322 151 33 chr2 42159784 42159936 -208527918 - MER5A DNA MER1_type -1 188 19 2340 78 0 0 chr2 42160167 42160460 -208527394 + AluY SINE Alu 1 293 -18 232 210 40 40 chr2 42160617 42160717 -208527137 + L1MC4 LINE L1 6607 6706 -1336 440 263 95 28 chr2 42161245 42161424 -208526430 + MIR3 SINE MIR 18 208 0 180 0 0 0 chr2 42161891 42161911 -208525943 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 22 0 0 0 chr2 42161975 42161997 -208525857 + AT_rich Low_complexity Low_complexity 1 22 0 193 150 10 40 chr2 42162106 42162206 -208525648 + (TA)n Simple_repeat Simple_repeat 1 97 0 254 291 0 0 chr2 42163308 42163363 -208524491 - MIR SINE MIR -129 133 79 405 325 39 26 chr2 42164068 42164222 -208523632 + MER5B DNA MER1_type 23 178 0 366 23 0 0 chr2 42164598 42164641 -208523213 + (TG)n Simple_repeat Simple_repeat 2 44 0 234 271 0 43 chr2 42166702 42166772 -208521082 - MIR SINE MIR -87 175 109 347 252 134 17 chr2 42166834 42166953 -208520901 - MER5B DNA MER1_type -43 135 3 345 250 102 31 chr2 42167708 42167836 -208520018 + MIR3 SINE MIR 20 156 -52 282 73 0 0 chr2 42169862 42169903 -208517951 + (CA)n Simple_repeat Simple_repeat 2 42 0 34 65 0 0 chr2 42170901 42170963 -208516891 + AT_rich Low_complexity Low_complexity 1 62 0 309 349 101 0 chr2 42171415 42171544 -208516310 + L2 LINE L2 3124 3265 -7 807 284 53 53 chr2 42171979 42172547 -208515307 + L1MC5 LINE L1 7347 7914 -47 21 0 0 0 chr2 42173317 42173338 -208514516 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 42174081 42174103 -208513751 + AT_rich Low_complexity Low_complexity 1 22 0 1127 60 0 13 chr2 42175845 42175996 -208511858 - L1PA5 LINE L1 0 6154 6006 1111 30 0 0 chr2 42175998 42176131 -208511723 + L1PA5 LINE L1 5840 5972 -182 201 386 35 58 chr2 42176321 42176492 -208511362 - L2 LINE L2 -89 3183 3017 1283 177 87 7 chr2 42176686 42176986 -208510868 - MER33 DNA MER1_type 0 324 1 21 0 0 0 chr2 42177551 42177572 -208510282 + AT_rich Low_complexity Low_complexity 1 21 0 2812 6 0 0 chr2 42178909 42179220 -208508634 + AluYa5 SINE Alu 1 311 0 23 54 0 0 chr2 42179489 42179526 -208508328 + AT_rich Low_complexity Low_complexity 1 37 0 1649 234 85 13 chr2 42179668 42180265 -208507589 - MER114 LTR ERV -8 640 1 26 64 0 0 chr2 42180302 42180349 -208507505 + AT_rich Low_complexity Low_complexity 1 47 0 2170 94 23 29 chr2 42180527 42180834 -208507020 + AluSg SINE Alu 2 306 -4 439 184 56 72 chr2 42181036 42181161 -208506693 + MIR SINE MIR 69 191 -71 2273 99 0 3 chr2 42182169 42182471 -208505383 + AluSc SINE Alu 1 301 -8 21 57 0 0 chr2 42182557 42182592 -208505262 + AT_rich Low_complexity Low_complexity 1 35 0 26 64 0 0 chr2 42182953 42183000 -208504854 + AT_rich Low_complexity Low_complexity 1 47 0 398 179 26 13 chr2 42183230 42183308 -208504546 - MER2 DNA MER2_type -266 79 1 317 289 41 0 chr2 42183321 42183442 -208504412 + L1ME3A LINE L1 5852 5977 -193 627 306 44 23 chr2 42183568 42183653 -208504201 - L1ME4a LINE L1 -239 5882 5800 13839 140 38 6 chr2 42183653 42185994 -208501860 + Tigger1 DNA MER2_type 2 2418 0 627 306 44 23 chr2 42185994 42186297 -208501557 - L1ME4a LINE L1 -321 5800 5486 465 283 29 29 chr2 42186603 42186776 -208501078 - L1ME4a LINE L1 -1946 4200 4028 1485 255 25 22 chr2 42186778 42187143 -208500711 + MLT1A2 LTR MaLR 1 366 -8 905 284 72 29 chr2 42187209 42187794 -208500060 - L1ME4a LINE L1 -2197 3949 3340 25 0 0 0 chr2 42187824 42187849 -208500005 + AT_rich Low_complexity Low_complexity 1 25 0 672 336 84 35 chr2 42188926 42189378 -208498476 + MLT1K LTR MaLR 2 475 -113 314 225 160 80 chr2 42189435 42189635 -208498219 + L1M4 LINE L1 4598 4813 -1333 460 289 57 86 chr2 42189761 42190041 -208497813 - LTR33 LTR ERVL -211 310 39 2879 192 49 9 chr2 42191505 42192135 -208495719 - L1MB7 LINE L1 -69 6115 5461 307 347 35 14 chr2 42192409 42192553 -208495301 + MIR SINE MIR 47 193 -69 1548 225 45 74 chr2 42192556 42192992 -208494862 - MLT1D LTR MaLR -4 501 81 1938 121 73 48 chr2 42192992 42193347 -208494507 - THE1B LTR MaLR 0 364 1 1548 225 45 74 chr2 42193347 42193426 -208494428 - MLT1D LTR MaLR -424 81 1 240 228 35 0 chr2 42195751 42195808 -208492046 - L1MC4 LINE L1 -142 7900 7842 2372 258 91 45 chr2 42195810 42196992 -208490862 - L1MC4a LINE L1 -117 7691 6510 23 0 0 0 chr2 42197027 42197050 -208490804 + AT_rich Low_complexity Low_complexity 1 23 0 3547 220 60 66 chr2 42197067 42197450 -208490404 - L1MB7 LINE L1 -18 6166 5782 342 0 0 0 chr2 42197450 42197488 -208490366 + (TA)n Simple_repeat Simple_repeat 1 38 0 3547 220 60 66 chr2 42197488 42198972 -208488882 - L1MB7 LINE L1 -402 5782 4329 856 118 0 0 chr2 42198972 42199108 -208488746 - L1MA5 LINE L1 -2 6298 6163 3547 220 60 66 chr2 42199108 42199212 -208488642 - L1MB7 LINE L1 -1855 4329 4226 1015 120 0 0 chr2 42199344 42199494 -208488360 - FRAM SINE Alu -7 169 20 24 32 0 0 chr2 42199988 42200019 -208487835 + AT_rich Low_complexity Low_complexity 1 31 0 4515 137 12 3 chr2 42200584 42201316 -208486538 + L1MA2 LINE L1 5521 6259 -45 495 120 0 0 chr2 42201316 42201391 -208486463 + AluS SINE Alu 231 305 -5 28 29 0 0 chr2 42201465 42201500 -208486354 + AT_rich Low_complexity Low_complexity 1 35 0 361 312 23 46 chr2 42201834 42202007 -208485847 - L1MC4a LINE L1 -1962 5846 5678 368 320 137 17 chr2 42202260 42202435 -208485419 - MIR SINE MIR -11 251 56 655 142 9 0 chr2 42202782 42202888 -208484966 + THE1B LTR MaLR 258 364 0 30 27 0 0 chr2 42203038 42203075 -208484779 + AT_rich Low_complexity Low_complexity 1 37 0 951 145 27 32 chr2 42203077 42203263 -208484591 - L1MA1 LINE L1 -8 6294 6110 29 60 0 0 chr2 42204827 42204877 -208482977 + AT_rich Low_complexity Low_complexity 1 50 0 278 298 0 0 chr2 42206924 42207008 -208480846 - L1MC4 LINE L1 -1345 6697 6614 243 286 20 41 chr2 42206928 42207026 -208480828 + L1MC4 LINE L1 6618 6713 -1329 * 244 254 0 0 chr2 42208418 42208473 -208479381 + (TA)n Simple_repeat Simple_repeat 2 56 0 180 343 82 45 chr2 42209290 42209424 -208478430 + L2 LINE L2 2839 2977 -337 2216 101 3 7 chr2 42209658 42209965 -208477889 - AluSx SINE Alu -6 306 1 2031 123 6 63 chr2 42210699 42211283 -208476571 + MER51A LTR ERV1 1 633 -1 930 129 18 6 chr2 42211450 42211613 -208476241 - L1MB2 LINE L1 -3 6168 6004 2575 52 3 0 chr2 42211893 42212202 -208475652 - AluY SINE Alu -1 310 1 713 318 90 50 chr2 42212205 42214083 -208473771 - L1MC4a LINE L1 -841 5305 3352 * 1339 282 99 36 chr2 42214038 42214546 -208473308 + L1ME3 LINE L1 4559 5033 -1129 770 167 0 6 chr2 42214546 42214702 -208473152 - L1MA4 LINE L1 -1 6299 6145 1339 282 99 36 chr2 42214702 42215639 -208472215 + L1ME3 LINE L1 5033 6129 -33 1838 149 87 0 chr2 42216247 42216568 -208471286 - THE1B LTR MaLR -15 349 1 27 0 0 0 chr2 42216772 42216799 -208471055 + AT_rich Low_complexity Low_complexity 1 27 0 4372 160 103 43 chr2 42216907 42217850 -208470004 + L1MC1 LINE L1 5333 6331 -2 23 0 0 0 chr2 42218694 42218717 -208469137 + AT_rich Low_complexity Low_complexity 1 23 0 281 294 24 4 chr2 42219528 42219677 -208468177 + MIR SINE MIR 44 250 -12 239 333 0 0 chr2 42219690 42219765 -208468089 + MIR3 SINE MIR 121 195 -13 250 218 36 0 chr2 42220037 42220092 -208467762 - MER5A DNA MER1_type -132 57 1 616 87 87 10 chr2 42220656 42220760 -208467094 + L1MA3 LINE L1 6186 6297 -8 734 86 76 0 chr2 42221060 42221165 -208466689 - L1PA7 LINE L1 -8 6146 6034 2345 80 0 10 chr2 42221273 42221585 -208466269 - AluY SINE Alu -2 309 1 1193 250 20 36 chr2 42222268 42222712 -208465142 - L1MDb LINE L1 -5073 1336 900 1865 99 11 0 chr2 42223053 42223315 -208464539 + AluSq SINE Alu 43 307 -6 435 310 16 75 chr2 42223691 42223946 -208463908 - MLT1J LTR MaLR -112 399 160 572 206 108 77 chr2 42224197 42224279 -208463575 - MIR SINE MIR -21 241 163 2401 157 18 21 chr2 42224279 42224713 -208463141 + Tigger2a DNA MER2_type 2 434 0 572 206 108 77 chr2 42224713 42224824 -208463030 - MIR SINE MIR -99 163 42 24 0 0 0 chr2 42224870 42224894 -208462960 + AT_rich Low_complexity Low_complexity 1 24 0 230 188 156 0 chr2 42224987 42225051 -208462803 - L2 LINE L2 -550 2764 2691 443 362 11 0 chr2 42227502 42227679 -208460175 - ERVL LTR ERVL -4078 1686 1508 263 133 0 17 chr2 42227888 42227948 -208459906 + (TA)n Simple_repeat Simple_repeat 1 59 0 266 164 0 16 chr2 42228188 42228249 -208459605 + (TA)n Simple_repeat Simple_repeat 2 61 0 849 218 32 48 chr2 42228254 42228502 -208459352 - MLT1I LTR MaLR -90 319 76 286 314 48 5 chr2 42229853 42230060 -208457794 - L1MDa LINE L1 -4868 2270 2055 216 0 0 0 chr2 42230200 42230224 -208457630 + (TA)n Simple_repeat Simple_repeat 1 24 0 3248 258 40 15 chr2 42230333 42231698 -208456156 - L1MDa LINE L1 -2751 4206 2801 624 248 32 6 chr2 42231708 42231865 -208455989 - L1MDa LINE L1 -6538 321 161 314 308 59 18 chr2 42231866 42232035 -208455819 + L1MB7 LINE L1 5709 5884 -300 23 33 0 0 chr2 42232070 42232100 -208455754 + AT_rich Low_complexity Low_complexity 1 30 0 334 266 35 131 chr2 42232363 42232592 -208455262 - L2 LINE L2 0 3313 3107 2078 106 7 0 chr2 42232592 42232892 -208454962 + AluSx SINE Alu 11 312 0 297 214 344 30 chr2 42232948 42233079 -208454775 + MER5A DNA MER1_type 11 182 -7 11365 30 2 0 chr2 42233562 42235328 -208452526 + L1P1 LINE L1 4028 5796 -359 191 355 60 63 chr2 42235334 42235602 -208452252 + L2 LINE L2 1978 2244 -1070 323 316 52 29 chr2 42236394 42236530 -208451324 + L2 LINE L2 3134 3272 0 373 308 58 46 chr2 42237816 42238056 -208449798 + MIR SINE MIR 8 250 -12 443 322 77 36 chr2 42239595 42240000 -208447854 + L1ME4a LINE L1 3911 4339 -1807 706 297 121 7 chr2 42240242 42240532 -208447322 + MLT1K LTR MaLR 266 588 0 581 281 67 52 chr2 42241005 42241606 -208446248 + L1ME4a LINE L1 5405 6015 -106 2163 112 7 3 chr2 42241712 42242016 -208445838 - AluSq SINE Alu -8 305 1 760 113 16 0 chr2 42242884 42243015 -208444839 - L1PA12 LINE L1 -234 5934 5797 877 57 89 0 chr2 42243815 42243939 -208443915 - MER85 DNA T2_type -3 136 2 703 285 97 13 chr2 42243998 42244226 -208443628 + MIR SINE MIR 16 262 0 210 179 26 0 chr2 42244311 42244350 -208443504 + (CATATA)n Simple_repeat Simple_repeat 3 42 0 227 203 0 68 chr2 42245093 42245167 -208442687 - Charlie8 DNA MER1_type -841 1576 1508 22 35 0 0 chr2 42245315 42245344 -208442510 + AT_rich Low_complexity Low_complexity 1 29 0 1856 186 113 7 chr2 42246238 42246646 -208441208 + MER74C LTR ERVL 1 451 -9 195 308 84 37 chr2 42247146 42247253 -208440601 + MIR SINE MIR 10 121 -141 2531 176 22 56 chr2 42247253 42247786 -208440068 + MLT2B2 LTR ERVL 1 515 0 197 269 45 15 chr2 42247945 42248012 -208439842 + MIR SINE MIR 120 188 -74 199 264 57 0 chr2 42248117 42248170 -208439684 - L2 LINE L2 -7 3306 3251 23 54 0 0 chr2 42248314 42248351 -208439503 + AT_rich Low_complexity Low_complexity 1 37 0 1992 168 35 10 chr2 42248517 42248530 -208439324 - L1MB7 LINE L1 -178 6006 5995 815 93 29 21 chr2 42248530 42248670 -208439184 - L1MB8 LINE L1 0 6178 6038 1992 168 35 10 chr2 42248670 42249060 -208438794 - L1MB7 LINE L1 -189 5995 5593 18303 65 16 3 chr2 42249094 42252345 -208435509 - L1PA6 LINE L1 -11 6143 2884 264 293 13 0 chr2 42253167 42253242 -208434612 + MIR3 SINE MIR 126 201 -7 411 38 0 0 chr2 42253882 42253935 -208433919 + (CA)n Simple_repeat Simple_repeat 2 54 0 338 274 13 105 chr2 42254165 42254318 -208433536 - MIR SINE MIR -73 189 51 23 68 0 0 chr2 42254522 42254566 -208433288 + AT_rich Low_complexity Low_complexity 1 44 0 40 49 0 0 chr2 42254624 42254685 -208433169 + AT_rich Low_complexity Low_complexity 1 61 0 2001 237 36 5 chr2 42254700 42255147 -208432707 + MLT2B2 LTR ERVL 1 461 -54 210 208 0 0 chr2 42255149 42255197 -208432657 + (TG)n Simple_repeat Simple_repeat 2 49 0 238 405 101 35 chr2 42255533 42255760 -208432094 + L2 LINE L2 3031 3272 0 1870 142 29 26 chr2 42255962 42256273 -208431581 + AluSx SINE Alu 1 312 0 225 333 0 24 chr2 42256294 42256378 -208431476 + MLT1J2 LTR MaLR 153 234 -315 251 85 85 68 chr2 42256522 42256581 -208431273 + MLT1J2 LTR MaLR 364 423 -27 830 338 91 51 chr2 42257046 42257863 -208429991 - L2 LINE L2 -299 3014 2166 253 258 0 67 chr2 42258459 42258548 -208429306 + LTR67 LTR ERVL 427 509 -48 279 133 0 0 chr2 42258683 42258728 -208429126 + (TA)n Simple_repeat Simple_repeat 1 45 0 1563 187 53 11 chr2 42258728 42259011 -208428843 - AluJb SINE Alu -17 295 1 4278 216 42 19 chr2 42259196 42259765 -208428089 + L1MD1 LINE L1 4730 5285 -957 2063 106 0 50 chr2 42259765 42260087 -208427767 + AluSp SINE Alu 1 306 -7 4278 216 42 19 chr2 42260087 42260984 -208426870 + L1MD1 LINE L1 5285 6229 -13 307 278 104 35 chr2 42261439 42261554 -208426300 + MIR SINE MIR 5 127 -135 234 0 0 0 chr2 42261976 42262002 -208425852 + (TTG)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr2 42262957 42262978 -208424876 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 42263695 42263716 -208424138 + AT_rich Low_complexity Low_complexity 1 21 0 1866 152 0 3 chr2 42263740 42264051 -208423803 - AluSq SINE Alu 0 312 3 183 320 0 13 chr2 42264199 42264277 -208423577 - MIR SINE MIR -138 124 48 307 297 119 11 chr2 42264539 42264724 -208423130 + L1ME LINE L1 4068 4272 -1874 1286 111 10 0 chr2 42264825 42265024 -208422830 + L1MA6 LINE L1 6100 6300 0 1037 260 24 12 chr2 42265032 42265508 -208422346 + L1ME LINE L1 5122 5603 -559 1008 270 20 27 chr2 42265530 42265823 -208422031 - MLT1A1 LTR MaLR -74 291 1 22 0 0 0 chr2 42266040 42266062 -208421792 + AT_rich Low_complexity Low_complexity 1 22 0 1838 124 10 33 chr2 42266328 42266627 -208421227 - AluSq SINE Alu 0 313 22 2678 99 0 3 chr2 42268668 42269033 -208418821 + THE1B LTR MaLR 1 364 0 193 368 53 34 chr2 42269086 42269409 -208418445 - L2 LINE L2 -569 2745 2417 1913 150 0 3 chr2 42270218 42270511 -208417343 - AluSx SINE Alu -15 297 6 211 291 142 30 chr2 42270522 42270656 -208417198 - MIR SINE MIR -74 188 40 583 221 66 7 chr2 42270682 42270818 -208417036 + MER20 DNA MER1_type 18 161 -58 222 37 0 0 chr2 42270840 42270867 -208416987 + (CA)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr2 42271094 42271115 -208416739 + AT_rich Low_complexity Low_complexity 1 21 0 315 310 31 0 chr2 42271215 42271344 -208416510 + (CATATA)n Simple_repeat Simple_repeat 2 134 0 333 47 0 0 chr2 42272151 42272194 -208415660 + (TA)n Simple_repeat Simple_repeat 2 44 0 2306 90 0 3 chr2 42272194 42272495 -208415359 - AluSc SINE Alu -9 300 1 1406 139 83 0 chr2 42274035 42274287 -208413567 - L1MA5A LINE L1 -10 6287 6015 518 271 52 97 chr2 42274330 42274389 -208413465 + MLT1J LTR MaLR 110 170 -341 1930 201 18 13 chr2 42274389 42274783 -208413071 + MSTD LTR MaLR 1 396 0 518 271 52 97 chr2 42274783 42275144 -208412710 + MLT1J LTR MaLR 170 511 0 27 29 0 0 chr2 42275595 42275629 -208412225 + AT_rich Low_complexity Low_complexity 1 34 0 10258 144 49 26 chr2 42276211 42277866 -208409988 - Tigger2 DNA MER2_type -5 2713 1011 1467 155 19 0 chr2 42277866 42278130 -208409724 + L1PB1 LINE L1 5882 6150 -1 10258 144 49 26 chr2 42278130 42278299 -208409555 - Tigger2 DNA MER2_type -1707 1011 847 269 272 81 69 chr2 42279818 42279991 -208407863 - MIR SINE MIR -51 211 37 187 231 0 0 chr2 42280090 42280129 -208407725 - MIR SINE MIR -28 234 196 336 237 92 66 chr2 42280710 42280862 -208406992 - L1ME4a LINE L1 0 6121 5966 802 173 0 0 chr2 42280882 42281015 -208406839 - FLAM_C SINE Alu 0 133 1 2249 98 0 16 chr2 42281253 42281559 -208406295 + AluSg SINE Alu 4 304 -6 610 299 67 9 chr2 42281792 42282016 -208405838 - MIR SINE MIR -24 238 2 * 3378 316 123 23 chr2 42282016 42282548 -208405306 + L2 LINE L2 666 1139 -2174 6167 93 20 15 chr2 42282548 42283834 -208404020 + L1PA11 LINE L1 4657 5946 -228 2494 59 0 3 chr2 42283834 42284139 -208403715 + AluY SINE Alu 1 304 -7 6167 93 20 15 chr2 42284139 42284369 -208403485 + L1PA11 LINE L1 5946 6173 -1 3378 316 123 23 chr2 42284369 42286239 -208401615 + L2 LINE L2 1139 3313 0 22 0 0 0 chr2 42286582 42286604 -208401250 + AT_rich Low_complexity Low_complexity 1 22 0 442 275 14 43 chr2 42286792 42286930 -208400924 - L2 LINE L2 0 3313 3180 209 180 20 0 chr2 42287226 42287276 -208400578 + (TA)n Simple_repeat Simple_repeat 2 52 0 186 43 0 0 chr2 42288128 42288151 -208399703 + (TG)n Simple_repeat Simple_repeat 2 24 0 290 353 79 16 chr2 42288485 42288675 -208399179 + MIR SINE MIR 20 221 -41 23 54 0 0 chr2 42288828 42288865 -208398989 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr2 42288950 42288982 -208398872 + AT_rich Low_complexity Low_complexity 1 32 0 355 240 78 19 chr2 42289111 42289265 -208398589 - L1MEc LINE L1 -4129 2267 2105 * 852 191 5 43 chr2 42289262 42289472 -208398382 + L1MD3 LINE L1 7776 7977 -18 269 312 35 23 chr2 42289490 42289663 -208398191 + L1MEc LINE L1 1643 1817 -4579 4999 175 34 8 chr2 42289949 42291097 -208396757 + L1MA7 LINE L1 5111 6289 -2 617 251 196 19 chr2 42291130 42291548 -208396306 + L1MEc LINE L1 2238 2729 -3486 1010 306 88 30 chr2 42291586 42292591 -208395263 + L1M4 LINE L1 3964 5026 -1120 343 272 101 13 chr2 42292595 42292753 -208395101 + L1M4 LINE L1 5170 5341 -805 24 0 0 0 chr2 42293554 42293578 -208394276 + AT_rich Low_complexity Low_complexity 1 24 0 2461 66 0 0 chr2 42293892 42294196 -208393658 - AluY SINE Alu -7 304 1 1996 208 82 24 chr2 42295752 42296261 -208391593 - MER92B LTR ERV1 0 636 98 319 318 40 16 chr2 42296759 42296885 -208390969 + MIR SINE MIR 1 129 -133 946 246 50 17 chr2 42296948 42297188 -208390666 - MER82 DNA MER2_type -1 652 405 748 216 7 0 chr2 42297186 42297334 -208390520 - MER82 DNA MER2_type -476 177 29 * 249 33 0 0 chr2 42297362 42297392 -208390462 + (TG)n Simple_repeat Simple_repeat 2 31 0 2085 216 50 27 chr2 42297427 42297985 -208389869 + MER90 LTR ERV1 8 614 0 2255 199 34 44 chr2 42298188 42298751 -208389103 + MER74A LTR ERVL 1 557 -1 216 0 0 0 chr2 42299332 42299356 -208388498 + (A)n Simple_repeat Simple_repeat 1 24 0 355 312 104 45 chr2 42300259 42300270 -208387584 + MIR SINE MIR 17 26 -236 2086 133 0 3 chr2 42300270 42300570 -208387284 - AluSx SINE Alu -13 299 1 355 312 104 45 chr2 42300570 42300779 -208387075 + MIR SINE MIR 26 250 -12 26 0 0 0 chr2 42302040 42302066 -208385788 + AT_rich Low_complexity Low_complexity 1 26 0 249 170 38 0 chr2 42302572 42302625 -208385229 + L1MA9 LINE L1 6254 6308 -4 557 87 29 10 chr2 42302653 42302756 -208385098 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 553 253 140 0 chr2 42302782 42302932 -208384922 + MER63B DNA MER1_type 3 173 -263 1443 162 0 19 chr2 42302960 42303225 -208384629 + MER1B DNA MER1_type 80 339 0 595 271 43 0 chr2 42303265 42303453 -208384401 + MER63B DNA MER1_type 240 435 0 391 289 13 39 chr2 42303757 42303913 -208383941 + MIR SINE MIR 31 182 -80 582 137 0 29 chr2 42304595 42304697 -208383157 - Alu SINE Alu -5 306 208 2339 104 0 0 chr2 42304941 42305250 -208382604 - AluSx SINE Alu -3 309 1 474 18 0 0 chr2 42305413 42305468 -208382386 + (TG)n Simple_repeat Simple_repeat 2 56 0 1200 254 68 63 chr2 42306062 42306535 -208381319 + MLT1F1 LTR MaLR 71 545 -22 222 131 0 49 chr2 42308082 42308143 -208379711 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 21 0 0 0 chr2 42308398 42308419 -208379435 + AT_rich Low_complexity Low_complexity 1 21 0 2037 133 3 62 chr2 42308485 42308671 -208379183 - LTR8 LTR ERV1 0 691 534 1792 43 56 0 chr2 42308671 42308902 -208378952 - L1PA7 LINE L1 0 6154 5911 2037 133 3 62 chr2 42308902 42309069 -208378785 - LTR8 LTR ERV1 -157 534 359 2626 148 78 0 chr2 42309069 42309507 -208378347 + MER41C LTR ERV1 1 553 -82 2472 118 3 14 chr2 42309540 42309906 -208377948 - LTR8 LTR ERV1 -329 362 1 320 242 189 7 chr2 42311112 42311265 -208376589 - MIR SINE MIR -10 252 72 210 294 43 22 chr2 42311527 42311619 -208376235 - L2 LINE L2 -522 2792 2699 33 0 0 0 chr2 42311721 42311754 -208376100 + AT_rich Low_complexity Low_complexity 1 33 0 2140 321 151 25 chr2 42312022 42313689 -208374165 - L2 LINE L2 -1 3312 1409 3007 240 33 29 chr2 42314214 42315460 -208372394 + L1M1 LINE L1 2768 4008 -3557 716 196 8 8 chr2 42315460 42315593 -208372261 - FLAM_A SINE Alu 0 133 1 3007 240 33 29 chr2 42315593 42315890 -208371964 + L1M1 LINE L1 4008 4333 -3232 1791 110 93 28 chr2 42315890 42316180 -208371674 + AluY SINE Alu 1 309 -2 3007 240 33 29 chr2 42316180 42316193 -208371661 + L1M1 LINE L1 4333 4344 -3221 2143 114 0 10 chr2 42316581 42316888 -208370966 - AluSg SINE Alu -6 304 1 541 369 6 0 chr2 42317326 42317505 -208370349 - MIR SINE MIR -80 182 3 319 89 0 0 chr2 42317714 42317759 -208370095 + MADE1 DNA Mariner 36 80 0 25 0 0 0 chr2 42317877 42317902 -208369952 + AT_rich Low_complexity Low_complexity 1 25 0 1352 180 51 8 chr2 42318354 42318610 -208369244 - AluJb SINE Alu -45 267 1 240 143 0 0 chr2 42318923 42318965 -208368889 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 4148 237 24 22 chr2 42319854 42320723 -208367131 + Tigger6a DNA MER2_type 2 875 -722 1444 202 16 45 chr2 42320723 42321099 -208366755 + MLT1A1 LTR MaLR 1 365 0 4148 237 24 22 chr2 42321099 42321295 -208366559 + Tigger6a DNA MER2_type 875 1069 -14 202 250 0 0 chr2 42321297 42321341 -208366513 + (TA)n Simple_repeat Simple_repeat 1 44 0 313 227 68 23 chr2 42321342 42321430 -208366424 - L1MC4 LINE L1 -1337 6705 6614 1069 245 73 15 chr2 42321908 42322235 -208365619 + L1ME1 LINE L1 5806 6151 -15 25 0 0 0 chr2 42323049 42323074 -208364780 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 42323263 42323292 -208364562 + AT_rich Low_complexity Low_complexity 1 29 0 579 74 126 0 chr2 42323566 42323661 -208364193 - L1P4 LINE L1 -699 5467 5361 2267 148 19 0 chr2 42323664 42324042 -208363812 + L1PA16 LINE L1 5773 6157 -9 27 0 0 0 chr2 42325093 42325120 -208362734 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr2 42325386 42325408 -208362446 + AT_rich Low_complexity Low_complexity 1 22 0 25 51 0 0 chr2 42327060 42327099 -208360755 + AT_rich Low_complexity Low_complexity 1 39 0 1342 93 19 131 chr2 42327557 42327816 -208360038 - MER30 DNA MER1_type 0 230 1 27 81 0 0 chr2 42327876 42327938 -208359916 + AT_rich Low_complexity Low_complexity 1 62 0 702 276 65 53 chr2 42328001 42328342 -208359512 - L1ME3 LINE L1 -51 6111 5767 496 317 120 61 chr2 42330149 42330422 -208357432 + L3 LINE CR1 436 738 -839 1632 141 12 4 chr2 42330422 42330670 -208357184 + AluSx SINE Alu 39 288 -24 496 317 120 61 chr2 42330670 42330771 -208357083 + L3 LINE CR1 738 832 -745 214 284 91 11 chr2 42331002 42331090 -208356764 + L3 LINE CR1 1027 1121 -456 413 342 17 33 chr2 42331342 42331582 -208356272 + L3 LINE CR1 1192 1427 -150 189 0 0 0 chr2 42331701 42331722 -208356132 + (TA)n Simple_repeat Simple_repeat 1 21 0 27 29 0 0 chr2 42331722 42331756 -208356098 + AT_rich Low_complexity Low_complexity 1 34 0 5805 57 5 3 chr2 42332482 42333219 -208354635 - L1PA7 LINE L1 -5 6149 5411 201 216 0 0 chr2 42333225 42333262 -208354592 - MER5B DNA MER1_type -139 39 3 537 214 63 16 chr2 42333272 42333398 -208354456 + MER5A DNA MER1_type 1 132 -57 981 271 86 17 chr2 42333668 42334018 -208353836 + MLT1A2 LTR MaLR 1 374 0 1200 306 61 36 chr2 42334111 42334989 -208352865 - L2 LINE L2 0 3313 2423 268 310 60 35 chr2 42335240 42335356 -208352498 - L2 LINE L2 0 3272 3154 5759 153 14 42 chr2 42335509 42336739 -208351115 + L1MA4A LINE L1 5110 6302 -1 214 208 21 0 chr2 42338116 42338164 -208349690 + (TATG)n Simple_repeat Simple_repeat 3 51 0 207 69 0 0 chr2 42338423 42338452 -208349402 + (CA)n Simple_repeat Simple_repeat 2 30 0 1576 204 0 26 chr2 42340130 42340439 -208347415 - AluJb SINE Alu -11 301 1 24 0 0 0 chr2 42341338 42341362 -208346492 + AT_rich Low_complexity Low_complexity 1 24 0 1975 121 147 21 chr2 42342011 42342320 -208345534 + MSTA LTR MaLR 1 368 -60 2100 96 20 3 chr2 42342320 42342613 -208345241 - AluSc SINE Alu -11 298 1 1975 121 147 21 chr2 42342613 42342683 -208345171 + MSTA LTR MaLR 368 428 0 803 308 45 50 chr2 42342947 42343005 -208344849 - L1ME LINE L1 -4965 1164 1107 1502 196 10 26 chr2 42343005 42343316 -208344538 - AluJo SINE Alu -2 310 5 803 308 45 50 chr2 42343316 42344175 -208343679 - L1ME LINE L1 -5022 1107 403 472 242 0 0 chr2 42344925 42345024 -208342830 + FRAM SINE Alu 67 165 -11 1593 182 3 46 chr2 42345536 42345838 -208342016 - AluJb SINE Alu -19 293 5 382 328 120 12 chr2 42346047 42346373 -208341481 - L1ME LINE L1 -3520 2609 2249 1818 173 42 33 chr2 42346449 42346808 -208341046 + MLT2D LTR ERVL 5 366 -48 305 299 19 6 chr2 42346839 42346996 -208340858 + (TA)n Simple_repeat Simple_repeat 2 160 0 270 120 20 40 chr2 42346996 42347046 -208340808 + MLT2D LTR ERVL 366 414 0 351 261 89 129 chr2 42347048 42347374 -208340480 - L1ME LINE L1 -5194 925 613 278 299 0 11 chr2 42347589 42347676 -208340178 - L1ME LINE L1 -5735 384 299 21 36 0 0 chr2 42347852 42347880 -208339974 + AT_rich Low_complexity Low_complexity 1 28 0 1754 127 34 7 chr2 42349766 42350058 -208337796 - AluSx SINE Alu -12 300 1 2478 261 66 37 chr2 42351277 42351658 -208336196 + L1M1 LINE L1 2611 2979 -4586 2153 123 0 3 chr2 42351658 42351966 -208335888 + AluSx SINE Alu 1 307 -5 2478 261 66 37 chr2 42351966 42352601 -208335253 + L1M1 LINE L1 2979 3696 -3869 390 21 0 0 chr2 42352601 42352648 -208335206 + (CA)n Simple_repeat Simple_repeat 2 48 0 2478 261 66 37 chr2 42352648 42352825 -208335029 + L1M1 LINE L1 3696 3866 -3699 842 226 49 101 chr2 42352908 42353293 -208334561 + MLT1A1 LTR MaLR 1 365 0 960 260 51 13 chr2 42353380 42353772 -208334082 + L1MEc LINE L1 1880 2286 -4110 40 59 0 0 chr2 42353865 42353933 -208333921 + AT_rich Low_complexity Low_complexity 1 68 0 22 0 0 0 chr2 42354041 42354063 -208333791 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr2 42354101 42354141 -208333713 + AT_rich Low_complexity Low_complexity 1 40 0 594 280 145 55 chr2 42354211 42354743 -208333111 - L1 LINE L1 -1809 4337 3758 22 0 0 0 chr2 42355324 42355346 -208332508 + AT_rich Low_complexity Low_complexity 1 22 0 404 125 0 0 chr2 42355353 42355409 -208332445 + AluS SINE Alu 220 275 -26 198 0 0 0 chr2 42355414 42355436 -208332418 + (TAA)n Simple_repeat Simple_repeat 2 23 0 28 0 0 0 chr2 42356200 42356228 -208331626 + AT_rich Low_complexity Low_complexity 1 28 0 355 282 120 40 chr2 42356675 42356976 -208330878 - HAL1b LINE L1 -710 638 314 378 323 86 14 chr2 42357340 42357660 -208330194 - L1MC/D LINE L1 -590 5572 5265 4435 45 21 56 chr2 42357661 42358746 -208329108 - MER11A LTR ERVK 0 1266 1 200 191 43 0 chr2 42358797 42358844 -208329010 + (TATG)n Simple_repeat Simple_repeat 3 51 0 24 0 0 0 chr2 42359027 42359051 -208328803 + AT_rich Low_complexity Low_complexity 1 24 0 411 335 244 16 chr2 42359316 42359800 -208328054 + L3 LINE CR1 979 1572 -5 1425 116 0 5 chr2 42360105 42360304 -208327550 - AluSg/x SINE Alu -15 297 100 189 226 0 0 chr2 42361281 42361334 -208326520 + CT-rich Low_complexity Low_complexity 4 56 0 21 36 0 0 chr2 42361410 42361438 -208326416 + AT_rich Low_complexity Low_complexity 1 28 0 217 333 57 9 chr2 42362998 42363103 -208324751 - L2 LINE L2 -36 3277 3168 399 266 87 29 chr2 42363298 42363471 -208324383 - MLT1K LTR MaLR -27 561 379 1389 253 70 66 chr2 42364280 42364869 -208322985 - MLT1E LTR MaLR -1 592 2 351 245 245 0 chr2 42365240 42365338 -208322516 - FLAM_A SINE Alu -11 122 1 266 277 20 10 chr2 42365346 42365447 -208322407 + MLT1J2 LTR MaLR 61 162 -288 772 293 63 6 chr2 42365730 42366048 -208321806 + HAL1b LINE L1 279 614 -734 27 0 0 0 chr2 42366314 42366341 -208321513 + AT_rich Low_complexity Low_complexity 1 27 0 345 309 43 24 chr2 42366410 42366620 -208321234 + L1MC4a LINE L1 2154 2367 -3779 239 216 62 41 chr2 42367125 42367222 -208320632 + L1MC4a LINE L1 2919 3017 -3129 32 57 0 0 chr2 42367319 42367372 -208320482 + AT_rich Low_complexity Low_complexity 1 53 0 261 315 0 0 chr2 42367507 42367580 -208320274 + (CA)n Simple_repeat Simple_repeat 2 74 0 34 0 0 0 chr2 42367589 42367623 -208320231 + AT_rich Low_complexity Low_complexity 1 34 0 339 275 54 22 chr2 42367836 42368083 -208319771 + L1MC4a LINE L1 3563 3819 -2327 304 289 51 101 chr2 42368128 42368596 -208319258 - L2 LINE L2 -4 3309 2 415 292 60 66 chr2 42368965 42369845 -208318009 + L1MC4a LINE L1 4161 5035 -1111 24 53 0 0 chr2 42369984 42370022 -208317832 + AT_rich Low_complexity Low_complexity 1 38 0 1246 277 70 106 chr2 42370153 42370502 -208317352 + L2 LINE L2 2402 2762 -551 1936 141 13 0 chr2 42370502 42370807 -208317047 + AluSx SINE Alu 1 309 -3 1246 277 70 106 chr2 42370807 42371389 -208316465 + L2 LINE L2 2762 3313 0 1025 297 129 9 chr2 42371411 42371993 -208315861 + L1MC4a LINE L1 5410 6061 -1747 379 286 143 11 chr2 42373903 42374078 -208313776 - MIR SINE MIR -31 231 34 611 263 45 28 chr2 42374321 42374500 -208313354 - LTR16A LTR ERVL -9 441 260 27 0 0 0 chr2 42374611 42374638 -208313216 + AT_rich Low_complexity Low_complexity 1 27 0 5093 16 0 0 chr2 42374638 42375219 -208312635 - L1PA3 LINE L1 -1 6154 5574 2418 27 7 0 chr2 42375219 42375514 -208312340 + L1PA3 LINE L1 5285 5581 -574 230 304 144 17 chr2 42375977 42376276 -208311578 + L1ME3A LINE L1 4511 4847 -1299 403 256 111 26 chr2 42376496 42376782 -208311072 + L1ME3A LINE L1 5192 5502 -660 300 261 148 40 chr2 42376967 42377143 -208310711 + L1ME3A LINE L1 5756 5950 -220 22 0 0 0 chr2 42377199 42377221 -208310633 + AT_rich Low_complexity Low_complexity 1 22 0 230 239 11 0 chr2 42379420 42379512 -208308342 + (TA)n Simple_repeat Simple_repeat 1 93 0 301 276 120 89 chr2 42380043 42380369 -208307485 + MLT1H1 LTR MaLR 104 439 -110 1385 226 34 15 chr2 42380387 42380714 -208307140 - MER58B DNA MER1_type -5 336 4 350 164 87 29 chr2 42380714 42380815 -208307039 + MLT1H1 LTR MaLR 449 555 0 227 324 111 19 chr2 42381340 42381448 -208306406 + L3b LINE CR1 1455 1572 -11 198 171 0 0 chr2 42381672 42381713 -208306141 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 189 0 0 0 chr2 42381971 42381992 -208305862 + (CA)n Simple_repeat Simple_repeat 1 21 0 1642 215 25 6 chr2 42382236 42382594 -208305260 + MLT1A1 LTR MaLR 1 365 0 189 0 0 0 chr2 42383138 42383159 -208304695 + (TA)n Simple_repeat Simple_repeat 2 22 0 559 382 35 19 chr2 42383343 42383472 -208304382 + L2 LINE L2 2524 2649 -665 1153 235 75 17 chr2 42383472 42383817 -208304037 - MLT1A1 LTR MaLR 0 365 1 559 382 35 19 chr2 42383817 42384119 -208303735 + L2 LINE L2 2649 2962 -352 536 149 0 11 chr2 42384310 42384397 -208303457 - LTR23 LTR ERV1 -32 405 320 378 282 28 56 chr2 42384432 42384574 -208303280 - L2 LINE L2 -12 3260 3123 180 97 0 0 chr2 42385042 42385073 -208302781 + (T)n Simple_repeat Simple_repeat 1 31 0 9413 210 24 18 chr2 42385375 42388000 -208299854 + L1MA5A LINE L1 2558 5202 -1646 3827 193 51 12 chr2 42387986 42388965 -208298889 + L1PB4 LINE L1 5829 6850 -8 * 4696 157 85 26 chr2 42388977 42390565 -208297289 + L1MA5A LINE L1 5183 6997 -2 327 339 35 0 chr2 42390584 42390699 -208297155 - MIR SINE MIR -65 197 79 866 20 0 0 chr2 42390724 42390826 -208297028 + L1PA2 LINE L1 6053 6154 -1 279 261 42 35 chr2 42390839 42390981 -208296873 - L1ME3A LINE L1 -10 6160 6018 5335 264 43 36 chr2 42390983 42392518 -208295336 + L1M4 LINE L1 10 1532 -5427 1464 225 48 19 chr2 42392518 42392783 -208295071 + MLT1B LTR MaLR 1 282 -108 1878 138 7 23 chr2 42392783 42393088 -208294766 + AluSc SINE Alu 1 300 -9 1464 225 48 19 chr2 42393088 42393200 -208294654 + MLT1B LTR MaLR 282 389 -1 5335 264 43 36 chr2 42393200 42393811 -208294043 + L1M4 LINE L1 1532 2178 -4781 2147 126 0 13 chr2 42393811 42394128 -208293726 + AluSq SINE Alu 1 313 0 5335 264 43 36 chr2 42394128 42394212 -208293642 + L1M4 LINE L1 2178 2260 -4699 1302 254 60 20 chr2 42394321 42394774 -208293080 + L1M4 LINE L1 4486 4956 -2001 2057 240 56 38 chr2 42394807 42395196 -208292658 + L1M4 LINE L1 5380 5788 -1169 2164 118 3 3 chr2 42395196 42395502 -208292352 + AluSc SINE Alu 1 306 -3 2057 240 56 38 chr2 42395502 42395795 -208292059 + L1M4 LINE L1 5788 6074 -883 267 292 52 30 chr2 42395785 42396089 -208291765 - L1MDa LINE L1 -4815 1725 1510 * 1366 188 100 26 chr2 42397137 42397478 -208290376 + MLT2D LTR ERVL 1 366 -48 258 32 0 0 chr2 42397481 42397512 -208290342 + (TA)n Simple_repeat Simple_repeat 1 31 0 307 267 0 0 chr2 42397512 42397602 -208290252 + L1MC4 LINE L1 6614 6703 -1339 261 233 35 0 chr2 42397561 42397647 -208290207 - L1MC4 LINE L1 -1340 6702 6614 * 231 196 0 0 chr2 42397678 42397724 -208290130 + MLT2D LTR ERVL 352 397 0 398 310 55 56 chr2 42399187 42399902 -208287952 - L1ME3A LINE L1 -220 5950 5217 340 320 76 41 chr2 42400017 42400106 -208287748 - L1ME3A LINE L1 -1082 5064 4980 2776 168 6 2 chr2 42400106 42400589 -208287265 - MER31A LTR ERV1 0 485 1 340 320 76 41 chr2 42400589 42401301 -208286553 - L1ME3A LINE L1 -1166 4980 4235 295 286 44 11 chr2 42401430 42401521 -208286333 + MER5A DNA MER1_type 13 106 -83 733 297 121 57 chr2 42401781 42402252 -208285602 + L2 LINE L2 2812 3312 -1 749 268 50 18 chr2 42402746 42402966 -208284888 + MIR SINE MIR 36 262 0 188 342 142 0 chr2 42403957 42404077 -208283777 + MIR SINE MIR 95 231 -31 814 208 51 115 chr2 42404154 42404544 -208283310 + MLT1A1 LTR MaLR 1 365 0 2952 261 69 9 chr2 42404561 42405358 -208282496 - HERVL-B3 LTR ERVL -4809 845 1 249 173 19 0 chr2 42405362 42405414 -208282440 - MLT2B3 LTR ERVL -4 516 464 950 207 54 89 chr2 42405414 42405694 -208282160 - MLT2B3 LTR ERVL -218 336 67 488 114 0 0 chr2 42405798 42405868 -208281986 - MLT2B3 LTR ERVL -484 70 1 3870 198 40 1 chr2 42406907 42408133 -208279721 - L1MC1 LINE L1 -323 6010 4735 * 9655 183 98 30 chr2 42408129 42410160 -208277694 - L1M2 LINE L1 -4679 2170 2 258 148 0 0 chr2 42410986 42411047 -208276807 - L1MA7 LINE L1 -1 6290 6230 701 252 14 0 chr2 42411051 42411194 -208276660 - FRAM SINE Alu -30 146 2 1081 316 48 45 chr2 42411472 42411989 -208275865 + L2 LINE L2 2505 3021 -292 1890 162 18 21 chr2 42412172 42412506 -208275348 - MER1B DNA MER1_type -6 333 1 256 188 12 129 chr2 42412506 42412554 -208275300 + MLT1-int LTR MaLR 433 468 -903 2247 88 0 0 chr2 42412554 42412851 -208275003 + AluY SINE Alu 1 297 -14 256 188 12 129 chr2 42412851 42412887 -208274967 + MLT1-int LTR MaLR 468 507 -864 2486 48 0 0 chr2 42413932 42414227 -208273627 - AluY SINE Alu -16 295 1 241 372 54 14 chr2 42414279 42414427 -208273427 - L2 LINE L2 -589 2725 2572 2604 99 8 6 chr2 42415161 42415524 -208272330 - THE1B LTR MaLR 0 364 1 3702 203 55 7 chr2 42415900 42416841 -208271013 - L1MB4 LINE L1 0 6180 5188 425 292 146 11 chr2 42417393 42417578 -208270276 - MIR SINE MIR -5 257 48 1364 190 52 28 chr2 42419211 42419500 -208268354 + AluJb SINE Alu 1 296 -16 27 29 0 0 chr2 42419501 42419535 -208268319 + AT_rich Low_complexity Low_complexity 1 34 0 301 193 0 96 chr2 42419535 42419618 -208268236 - L1MB7 LINE L1 -4 6180 6106 376 305 47 14 chr2 42419925 42420138 -208267716 + L1ME3A LINE L1 4571 4790 -1356 243 0 0 0 chr2 42420160 42420187 -208267667 + (CA)n Simple_repeat Simple_repeat 2 28 0 410 302 96 50 chr2 42420285 42420878 -208266976 + L1ME3A LINE L1 4967 5594 -570 353 301 20 0 chr2 42420884 42421030 -208266824 + L1ME3A LINE L1 5802 5950 -220 1103 185 110 55 chr2 42421053 42421399 -208266455 - MLT1A1 LTR MaLR 0 365 1 243 317 0 12 chr2 42422181 42422263 -208265591 + MIR SINE MIR 53 133 -129 266 326 0 113 chr2 42423151 42423292 -208264562 - MER5A DNA MER1_type -25 164 40 24 32 0 0 chr2 42423329 42423360 -208264494 + AT_rich Low_complexity Low_complexity 1 31 0 354 318 45 62 chr2 42423476 42423652 -208264202 + MIR SINE MIR 19 191 -71 757 221 138 0 chr2 42424521 42424702 -208263152 - MER6B DNA MER2_type -1 209 4 1633 215 6 36 chr2 42425622 42426094 -208261760 - MER89 LTR ERV1 0 559 2 505 364 37 12 chr2 42428773 42429015 -208258839 - MIR SINE MIR -14 248 1 284 358 122 25 chr2 42430220 42430952 -208256902 + L2 LINE L2 1383 2185 -1129 218 271 112 9 chr2 42431232 42431339 -208256515 + L2 LINE L2 3195 3312 -1 871 246 55 67 chr2 42432540 42432870 -208254984 - L2 LINE L2 0 3313 2988 2867 182 25 7 chr2 42433109 42433659 -208254195 - L1MC3 LINE L1 -8 7777 7218 219 333 126 0 chr2 42435611 42435722 -208252132 + L2 LINE L2 3189 3313 0 273 353 66 7 chr2 42435836 42435972 -208251882 - L2 LINE L2 -8 3264 3121 391 257 46 46 chr2 42436211 42436386 -208251468 - MER5B DNA MER1_type 0 178 4 990 184 53 60 chr2 42436586 42436852 -208251002 - AluJo SINE Alu 0 312 49 25 65 0 0 chr2 42437166 42437212 -208250642 + AT_rich Low_complexity Low_complexity 1 46 0 342 268 69 104 chr2 42437781 42438128 -208249726 - MLT1J LTR MaLR -54 457 123 2081 136 3 0 chr2 42439137 42439446 -208248408 - AluSq SINE Alu -3 310 1 1658 169 10 16 chr2 42440287 42440594 -208247260 - AluJo SINE Alu -7 305 1 850 188 0 0 chr2 42441853 42441991 -208245863 + Tigger3(Golem) DNA MER2_type 2888 3025 -4 1547 135 0 4 chr2 42441994 42442239 -208245615 - L1MA9 LINE L1 -77 6235 5992 584 319 64 13 chr2 42445728 42445963 -208241891 + MIR SINE MIR 3 249 -13 2180 88 0 39 chr2 42447623 42447928 -208239926 + AluSc SINE Alu 1 293 -16 1536 172 0 18 chr2 42448277 42448556 -208239298 - AluJb SINE Alu -4 308 35 1148 270 84 26 chr2 42448725 42449343 -208238511 + HsTC2c DNA Tc2 3 726 -3 476 113 0 78 chr2 42449465 42449585 -208238269 - L1P5 LINE L1 -465 5686 5582 1689 165 37 40 chr2 42449585 42449961 -208237893 + THE1C LTR MaLR 1 375 0 3999 118 62 10 chr2 42449961 42450586 -208237268 + THE1C-int LTR MaLR 1 658 -922 1976 152 133 5 chr2 42450586 42450955 -208236899 + MSTA LTR MaLR 13 428 0 346 355 85 20 chr2 42451081 42451329 -208236525 - L2 LINE L2 -199 3073 2810 22 0 0 0 chr2 42452179 42452201 -208235653 + AT_rich Low_complexity Low_complexity 1 22 0 487 280 76 14 chr2 42452959 42453170 -208234684 - LTR33A LTR ERVL -27 496 273 399 287 69 35 chr2 42453587 42453761 -208234093 - LTR16A1 LTR ERVL -12 445 266 386 226 57 16 chr2 42453843 42453967 -208233887 - LTR16A1 LTR ERVL -311 146 18 227 176 0 39 chr2 42455153 42455204 -208232650 - MLT1D LTR MaLR 0 626 578 2264 120 0 0 chr2 42455234 42455534 -208232320 + AluSx SINE Alu 1 300 -12 938 228 111 66 chr2 42455565 42455942 -208231912 - MLT1D LTR MaLR -66 439 46 265 235 74 74 chr2 42456374 42456536 -208231318 + L2 LINE L2 3102 3263 -50 193 324 73 0 chr2 42457000 42457068 -208230786 - L2 LINE L2 -3 3269 3197 3273 147 9 40 chr2 42457145 42457715 -208230139 - MLT2B3 LTR ERVL -2 552 1 677 308 156 11 chr2 42458089 42458531 -208229323 + L2 LINE L2 2808 3313 0 204 40 0 0 chr2 42458630 42458655 -208229199 + (TC)n Simple_repeat Simple_repeat 1 25 0 1697 132 31 0 chr2 42459456 42459743 -208228111 - L1MA5 LINE L1 -5 6295 6000 1977 136 27 0 chr2 42460021 42460316 -208227538 - AluSx SINE Alu -9 303 1 2092 203 87 31 chr2 42460814 42461355 -208226499 + L1MC3 LINE L1 7207 7777 -8 21 0 0 0 chr2 42461371 42461392 -208226462 + AT_rich Low_complexity Low_complexity 1 21 0 242 250 36 12 chr2 42461412 42461496 -208226358 - Charlie5 DNA MER1_type -2502 110 25 260 232 78 99 chr2 42461644 42461928 -208225926 - L1MEc LINE L1 -2954 3261 2984 310 273 79 104 chr2 42462097 42462775 -208225079 - L1MEc LINE L1 -4686 1710 1060 7932 80 4 6 chr2 42462775 42463848 -208224006 + MER11C LTR ERVK 1 1071 0 310 273 79 104 chr2 42463848 42464093 -208223761 - L1MEc LINE L1 -5336 1060 810 255 289 44 0 chr2 42464235 42464349 -208223505 + L1MC4a LINE L1 5808 5926 -1882 4586 140 18 27 chr2 42464757 42465538 -208222316 + L1PA12 LINE L1 5392 6165 -3 30 45 0 0 chr2 42465720 42465764 -208222090 + AT_rich Low_complexity Low_complexity 1 44 0 289 252 23 84 chr2 42465931 42466062 -208221792 - L3 LINE CR1 -129 1448 1326 473 284 115 29 chr2 42466757 42467334 -208220520 - L1ME LINE L1 -341 5890 5212 1923 101 3 60 chr2 42467334 42467652 -208220202 - AluSc SINE Alu -7 302 3 473 284 115 29 chr2 42467652 42467890 -208219964 - L1ME LINE L1 -1019 5212 4996 2147 128 0 6 chr2 42467955 42468267 -208219587 - AluSx SINE Alu 0 312 3 316 243 99 9 chr2 42468728 42468839 -208219015 - L1ME3A LINE L1 -9 6161 6041 23 0 0 0 chr2 42468847 42468870 -208218984 + AT_rich Low_complexity Low_complexity 1 23 0 369 323 91 25 chr2 42469056 42469452 -208218402 - L1ME LINE L1 -1999 4216 3795 304 298 128 24 chr2 42469591 42470171 -208217683 - L1ME LINE L1 -3221 2994 2355 255 273 73 9 chr2 42470176 42470286 -208217568 - L1MC4 LINE L1 0 8042 7926 421 236 171 0 chr2 42470380 42470520 -208217334 - L1MC4 LINE L1 -126 7916 7753 447 245 52 0 chr2 42470534 42470726 -208217128 - L1ME LINE L1 -678 5484 5283 1116 287 96 9 chr2 42470734 42471431 -208216423 - L1ME LINE L1 -833 5313 4556 189 215 25 25 chr2 42472709 42472788 -208215066 + CT-rich Low_complexity Low_complexity 3 81 0 813 239 65 26 chr2 42472829 42473059 -208214795 - LTR16B LTR ERVL -4 460 222 1678 189 3 10 chr2 42473272 42473569 -208214285 - AluJb SINE Alu -17 295 1 21 36 0 0 chr2 42473703 42473731 -208214123 + AT_rich Low_complexity Low_complexity 1 28 0 2799 181 23 4 chr2 42473887 42474413 -208213441 - MER34B LTR ERV1 -29 536 1 2723 176 45 12 chr2 42474559 42475065 -208212789 + LTR45 LTR ERV1 1 523 -2 1251 236 82 64 chr2 42475299 42475322 -208212532 - MER34C LTR ERV1 0 585 564 2207 197 45 94 chr2 42475322 42476048 -208211806 - LTR8 LTR ERV1 0 691 1 1251 236 82 64 chr2 42476048 42476599 -208211255 - MER34C LTR ERV1 -21 564 1 2880 191 40 11 chr2 42477343 42477955 -208209899 + MER39 LTR ERV1 3 672 -35 1206 222 186 11 chr2 42478194 42478564 -208209290 + MLT1C LTR MaLR 18 452 -15 369 325 15 66 chr2 42478584 42478781 -208209073 + L1MEc LINE L1 1088 1274 -5122 1493 243 39 74 chr2 42478789 42479428 -208208426 - L1ME LINE L1 -5476 920 304 569 294 60 0 chr2 42479435 42479619 -208208235 - L1ME LINE L1 -6167 229 35 325 269 53 34 chr2 42480741 42480949 -208206905 - L1M4 LINE L1 -1140 5006 4795 309 268 19 70 chr2 42480966 42481123 -208206731 - L1M4 LINE L1 -1493 4653 4505 1718 148 7 11 chr2 42481123 42481429 -208206425 - AluSx SINE Alu 0 313 9 1146 232 45 17 chr2 42481628 42481986 -208205868 - L1ME2 LINE L1 -120 6044 5677 11803 101 2 2 chr2 42482101 42484590 -208203264 - L1PA7 LINE L1 0 6154 3664 1263 240 21 13 chr2 42484590 42484967 -208202887 - L1ME2 LINE L1 -487 5677 5298 293 114 58 37 chr2 42485090 42485336 -208202518 + (TA)n Simple_repeat Simple_repeat 1 251 0 847 260 60 21 chr2 42485411 42485696 -208202158 - L1MD2 LINE L1 -14 6345 6050 7568 35 10 0 chr2 42487215 42488881 -208198973 + L1PA3 LINE L1 4475 6150 -5 391 343 61 14 chr2 42489763 42490008 -208197846 + MIR SINE MIR 7 262 0 187 234 130 26 chr2 42490940 42491004 -208196850 - L3 LINE CR1 -826 751 676 7497 139 18 25 chr2 42491004 42492310 -208195544 - HSMAR2 DNA Mariner -2 1300 4 187 234 130 26 chr2 42492310 42492322 -208195532 - L3 LINE CR1 -901 676 667 190 308 31 0 chr2 42494117 42494182 -208193672 + MIR SINE MIR 184 250 -12 7280 46 1 7 chr2 42494253 42495717 -208192137 - L1PA4 LINE L1 -2 6153 4692 291 242 73 57 chr2 42496760 42496884 -208190970 + MIR SINE MIR 133 258 -4 200 194 10 31 chr2 42497006 42497104 -208190750 + (TA)n Simple_repeat Simple_repeat 1 96 0 305 178 22 56 chr2 42497112 42497202 -208190652 + L1MCa LINE L1 1995 2081 -4345 596 256 6 37 chr2 42497246 42497410 -208190444 - MER58B DNA MER1_type -6 335 177 185 354 61 20 chr2 42497611 42497710 -208190144 - L2 LINE L2 0 3313 3211 246 54 0 0 chr2 42497737 42497774 -208190080 + L1MA3 LINE L1 6269 6305 0 486 290 70 38 chr2 42497885 42498195 -208189659 + MLT1H LTR MaLR 1 364 -185 228 143 0 0 chr2 42498428 42498470 -208189384 + (TG)n Simple_repeat Simple_repeat 1 42 0 194 0 0 37 chr2 42499555 42499582 -208188272 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 250 291 100 9 chr2 42499630 42499740 -208188114 - MLT1H LTR MaLR -98 457 338 757 230 13 39 chr2 42499780 42500010 -208187844 - MLT1H LTR MaLR -305 244 21 307 252 78 26 chr2 42500214 42500329 -208187525 - MER103 DNA DNA -20 146 26 522 273 26 7 chr2 42501836 42501990 -208185864 + L1MEc LINE L1 107 263 -6133 561 292 71 40 chr2 42502042 42502268 -208185586 + L1MEc LINE L1 361 593 -5803 5275 227 84 53 chr2 42502285 42504614 -208183240 + L1MDa LINE L1 48 2650 -3890 1515 217 25 6 chr2 42504661 42504975 -208182879 + MER2 DNA MER2_type 3 322 -23 2901 281 41 34 chr2 42505148 42506182 -208181672 + L1MEc LINE L1 599 1649 -4747 1302 184 0 93 chr2 42506182 42506525 -208181329 + AluY SINE Alu 1 311 0 2901 281 41 34 chr2 42506525 42506919 -208180935 + L1MEc LINE L1 1649 2038 -4358 500 265 4 80 chr2 42506897 42507135 -208180719 + L1ME1 LINE L1 5947 6166 -69 * 546 382 4 4 chr2 42507208 42507433 -208180421 - MIR SINE MIR -18 244 20 248 325 85 58 chr2 42508644 42508832 -208179022 - L2 LINE L2 0 3272 3080 292 351 17 17 chr2 42509158 42509332 -208178522 - MARNA DNA Mariner -281 305 132 450 0 0 0 chr2 42509857 42509907 -208177947 + (CA)n Simple_repeat Simple_repeat 1 50 0 788 303 34 43 chr2 42510926 42511533 -208176321 + L1MEc LINE L1 2082 2647 -3568 594 41 0 0 chr2 42513635 42513708 -208174146 + (TA)n Simple_repeat Simple_repeat 1 73 0 208 312 14 80 chr2 42514772 42514910 -208172944 + MIR SINE MIR 41 169 -93 315 0 0 0 chr2 42516587 42516622 -208171232 + (TG)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr2 42516632 42516654 -208171200 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 42516710 42516742 -208171112 + AT_rich Low_complexity Low_complexity 1 32 0 1512 219 70 38 chr2 42516858 42517328 -208170526 - MLT1D LTR MaLR 0 505 21 24 0 0 0 chr2 42517547 42517571 -208170283 + AT_rich Low_complexity Low_complexity 1 24 0 215 261 67 126 chr2 42517903 42518022 -208169832 - MIR SINE MIR -57 151 40 19424 83 2 5 chr2 42518118 42520819 -208167035 - L1PA6 LINE L1 -2101 4045 1353 10619 61 6 0 chr2 42520820 42522947 -208164907 + L1PA6 LINE L1 4018 6151 -3 296 298 114 32 chr2 42523269 42523427 -208164427 + MIR SINE MIR 19 189 -73 1835 114 8 0 chr2 42523535 42523798 -208164056 - AluSp SINE Alu -4 309 45 261 0 0 0 chr2 42524549 42524578 -208163276 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr2 42524991 42525021 -208162833 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 42525263 42525284 -208162570 + AT_rich Low_complexity Low_complexity 1 21 0 180 111 0 0 chr2 42525422 42525449 -208162405 + (TG)n Simple_repeat Simple_repeat 2 28 0 2086 143 53 6 chr2 42525449 42525791 -208162063 - THE1B LTR MaLR -3 361 4 10443 110 12 12 chr2 42525805 42527319 -208160535 - THE1B-int LTR MaLR -66 1514 1 2340 127 31 6 chr2 42527319 42527673 -208160181 - THE1B LTR MaLR 0 364 2 222 37 0 0 chr2 42527677 42527704 -208160150 + (TG)n Simple_repeat Simple_repeat 2 28 0 201 192 14 41 chr2 42527722 42527795 -208160059 + GA-rich Low_complexity Low_complexity 3 73 0 194 299 51 43 chr2 42528139 42528256 -208159598 - L3 LINE CR1 -830 747 630 189 367 42 17 chr2 42528496 42528616 -208159238 - L2 LINE L2 -228 3044 2922 541 116 11 0 chr2 42529419 42529514 -208158340 + L1MA4 LINE L1 6196 6291 -9 23 0 0 0 chr2 42529891 42529914 -208157940 + AT_rich Low_complexity Low_complexity 1 23 0 357 82 0 0 chr2 42531308 42531357 -208156497 + (TTCA)n Simple_repeat Simple_repeat 2 50 0 964 160 0 0 chr2 42531357 42531507 -208156347 - AluSg/x SINE Alu -30 282 133 2262 100 0 3 chr2 42531508 42531808 -208156046 - AluSq SINE Alu -12 301 3 2330 60 0 10 chr2 42531906 42532206 -208155648 + AluY SINE Alu 1 297 -14 5702 148 40 3 chr2 42532443 42533660 -208154194 - L1PA13 LINE L1 0 6163 4885 3755 177 7 6 chr2 42533657 42534373 -208153481 + L1PA13 LINE L1 4136 4852 -1294 * 529 306 197 0 chr2 42534611 42534804 -208153050 + MIR SINE MIR 12 242 -20 1085 199 0 0 chr2 42536237 42536433 -208151421 + AluJo SINE Alu 102 297 -15 210 128 0 0 chr2 42536690 42536729 -208151125 + (A)n Simple_repeat Simple_repeat 1 39 0 1835 167 102 39 chr2 42537027 42537488 -208150366 - LTR2B LTR ERV1 0 490 1 375 294 162 0 chr2 42539195 42539331 -208148523 + MIR SINE MIR 31 188 -74 436 396 57 8 chr2 42540369 42540634 -208147220 - L2 LINE L2 0 3272 2995 506 17 0 0 chr2 42540848 42540940 -208146914 + L1PA4 LINE L1 6087 6178 0 260 259 74 0 chr2 42540973 42541081 -208146773 - L1MC4 LINE L1 -3 8039 7924 2182 244 44 64 chr2 42541263 42541698 -208146156 - L1ME2 LINE L1 -1 6163 5754 2354 147 75 0 chr2 42541698 42542100 -208145754 - MSTB1 LTR MaLR 0 432 1 2182 244 44 64 chr2 42542100 42542564 -208145290 - L1ME2 LINE L1 -410 5754 5282 1853 253 70 12 chr2 42542568 42543302 -208144552 - L1ME2 LINE L1 -920 5226 4451 920 220 65 79 chr2 42543308 42543430 -208144424 + MLT1A2 LTR MaLR 8 130 -244 315 23 23 0 chr2 42543430 42543474 -208144380 - L1PA4 LINE L1 -3 6152 6108 920 220 65 79 chr2 42543474 42543719 -208144135 + MLT1A2 LTR MaLR 130 370 -4 285 249 56 76 chr2 42543724 42543921 -208143933 - L1ME2 LINE L1 -1691 4455 4263 1126 280 129 25 chr2 42543943 42544233 -208143621 - MLT1G1 LTR MaLR -32 563 305 306 0 0 0 chr2 42544233 42544267 -208143587 + (GA)n Simple_repeat Simple_repeat 1 34 0 1126 280 129 25 chr2 42544267 42544486 -208143368 - MLT1G1 LTR MaLR -290 305 1 1547 266 104 35 chr2 42544486 42544592 -208143262 - L1ME2 LINE L1 -1876 4270 4173 2395 65 7 0 chr2 42544592 42544901 -208142953 - AluY SINE Alu 0 311 1 1547 266 104 35 chr2 42544901 42545575 -208142279 - L1ME2 LINE L1 -1973 4173 3436 252 198 81 23 chr2 42545634 42545720 -208142134 - L1ME2 LINE L1 -2859 3287 3197 403 244 13 0 chr2 42547019 42547097 -208140757 - AluJ/FLAM SINE Alu -223 79 1 23 33 0 0 chr2 42547105 42547135 -208140719 + AT_rich Low_complexity Low_complexity 1 30 0 314 297 109 63 chr2 42547168 42547407 -208140447 + MIR SINE MIR 13 262 0 2156 77 7 20 chr2 42547794 42548094 -208139760 - AluY SINE Alu -15 296 1 23 0 0 0 chr2 42549039 42549062 -208138792 + AT_rich Low_complexity Low_complexity 1 23 0 278 321 83 42 chr2 42549724 42549892 -208137962 + MIR3 SINE MIR 9 183 -25 1022 107 0 0 chr2 42550162 42550311 -208137543 - AluSg/x SINE Alu -5 307 159 2244 110 10 0 chr2 42551097 42551406 -208136448 - AluSx SINE Alu 0 312 1 2506 188 93 31 chr2 42551441 42551531 -208136323 - L1MC3 LINE L1 -7 7778 7695 378 175 62 0 chr2 42551531 42551628 -208136226 - L1PA8 LINE L1 0 6172 6070 2506 188 93 31 chr2 42551628 42552148 -208135706 - L1MC3 LINE L1 -90 7695 7130 2292 100 0 3 chr2 42552381 42552691 -208135163 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr2 42553042 42553063 -208134791 + AT_rich Low_complexity Low_complexity 1 21 0 1653 132 18 7 chr2 42553575 42553855 -208133999 + L1MA5 LINE L1 6012 6294 -6 237 204 10 112 chr2 42553919 42554017 -208133837 + L2 LINE L2 3225 3312 -1 2289 47 50 7 chr2 42555172 42555469 -208132385 + AluY SINE Alu 1 310 -1 2928 248 87 21 chr2 42556485 42558011 -208129843 + L1ME1 LINE L1 4299 5960 -206 2382 79 0 16 chr2 42558011 42558327 -208129527 + AluY SINE Alu 1 311 0 2928 248 87 21 chr2 42558327 42558542 -208129312 + L1ME1 LINE L1 5960 6159 -7 291 352 52 5 chr2 42558636 42558849 -208129005 - L1ME LINE L1 -323 5798 5576 183 139 0 0 chr2 42559633 42559669 -208128185 + (TG)n Simple_repeat Simple_repeat 2 37 0 370 223 21 0 chr2 42561412 42561506 -208126348 - MER58 DNA MER1_type -6 2414 2319 344 261 11 0 chr2 42561526 42561614 -208126240 - MER58 DNA MER1_type -124 91 3 1681 192 7 3 chr2 42561749 42562041 -208125813 - AluJb SINE Alu -19 293 1 39 50 0 0 chr2 42564513 42564573 -208123281 + AT_rich Low_complexity Low_complexity 1 60 0 462 293 102 0 chr2 42564730 42564877 -208122977 - MIR SINE MIR -59 203 42 2136 218 32 16 chr2 42564878 42565403 -208122451 - L1MC4 LINE L1 -4 8038 7441 482 332 150 31 chr2 42565431 42566051 -208121803 + L2 LINE L2 2005 2698 -616 390 256 74 41 chr2 42566126 42566247 -208121607 - L2 LINE L2 0 3272 3148 * 535 270 154 35 chr2 42566243 42566502 -208121352 + L2 LINE L2 3024 3313 0 315 369 88 23 chr2 42566504 42566764 -208121090 - L2 LINE L2 -116 3197 2921 278 345 28 21 chr2 42567282 42567424 -208120430 + L3 LINE CR1 1431 1573 -4 2232 67 3 3 chr2 42569012 42569318 -208118536 - AluY SINE Alu 0 306 1 190 328 17 17 chr2 42569797 42569855 -208117999 - MIR SINE MIR -160 102 45 218 224 60 15 chr2 42570210 42570277 -208117577 - MER5C DNA MER1_type -254 70 1 * 231 191 43 0 chr2 42570277 42570323 -208117531 + MER5A DNA MER1_type 71 118 -71 213 325 121 0 chr2 42570599 42570682 -208117172 - MIR SINE MIR -111 151 59 324 274 104 47 chr2 42572175 42572361 -208115493 - MIR SINE MIR -66 196 3 1227 237 38 38 chr2 42573907 42574333 -208113521 + L1M4 LINE L1 2698 3123 -3023 575 219 39 28 chr2 42574335 42574513 -208113341 - MLT1C LTR MaLR -140 327 148 394 352 59 12 chr2 42576204 42576361 -208111493 - L1ME LINE L1 -303 5818 5670 1859 149 3 37 chr2 42576361 42576684 -208111170 - AluSx SINE Alu 0 312 1 394 352 59 12 chr2 42576684 42576847 -208111007 - L1ME LINE L1 -451 5670 5483 227 326 12 0 chr2 42577217 42577303 -208110551 - MIR SINE MIR 0 262 176 394 336 38 0 chr2 42577860 42577991 -208109863 - MIR SINE MIR -119 143 8 1997 126 14 3 chr2 42578099 42578392 -208109462 - AluSg SINE Alu -14 296 1 2141 119 36 25 chr2 42578507 42578867 -208108987 + THE1B LTR MaLR 1 364 0 11329 103 1 6 chr2 42578867 42580455 -208107399 + THE1B-int LTR MaLR 1 1580 0 2244 110 48 25 chr2 42580455 42580811 -208107043 + THE1B LTR MaLR 1 364 0 230 258 0 30 chr2 42580884 42580950 -208106904 - MIR SINE MIR -46 216 153 369 238 56 148 chr2 42582399 42582723 -208105131 + MLT1H LTR MaLR 98 384 -25 639 113 0 57 chr2 42583349 42583473 -208104381 - L1MA8 LINE L1 -5 6286 6170 810 296 46 35 chr2 42583687 42584119 -208103735 + L1ME1 LINE L1 26 462 -5961 957 303 105 22 chr2 42584425 42585109 -208102745 + L1ME1 LINE L1 795 1592 -5349 3669 126 26 38 chr2 42585109 42585770 -208102084 - MER39B LTR ERV1 0 653 1 957 303 105 22 chr2 42585770 42586085 -208101769 + L1ME1 LINE L1 1592 1880 -5061 478 250 94 23 chr2 42586084 42586392 -208101462 + L1ME1 LINE L1 3964 4293 -2648 * 200 100 25 0 chr2 42586436 42586476 -208101378 + (TA)n Simple_repeat Simple_repeat 1 41 0 368 303 32 60 chr2 42586807 42586877 -208100977 - L1ME LINE L1 -392 5729 5659 2167 108 0 29 chr2 42586877 42587184 -208100670 - AluSp SINE Alu -15 298 1 368 303 32 60 chr2 42587184 42587331 -208100523 - L1ME LINE L1 -462 5659 5518 735 123 9 0 chr2 42587335 42587449 -208100405 + Ricksha DNA DNA 1 115 -1066 481 169 12 0 chr2 42587456 42587539 -208100315 + Ricksha DNA DNA 2853 2936 -315 254 151 0 38 chr2 42587546 42587599 -208100255 - L1PA16 LINE L1 -9 6157 6107 399 238 101 21 chr2 42587601 42587790 -208100064 + L1ME1 LINE L1 4341 4544 -2397 872 111 37 58 chr2 42587812 42588001 -208099853 - L1MA7 LINE L1 -151 6140 5956 1070 282 92 21 chr2 42588002 42588424 -208099430 - ERVL-B1 LTR ERVL -5311 453 2 1626 233 39 64 chr2 42588425 42588958 -208098896 - MLT2B1 LTR ERVL 0 520 1 318 241 11 0 chr2 42588958 42589045 -208098809 + L1ME1 LINE L1 5021 5108 -1833 * 1732 261 87 44 chr2 42589040 42590281 -208097573 + L1ME1 LINE L1 5607 6911 -50 1977 157 27 0 chr2 42590934 42591272 -208096582 + MER7A DNA MER2_type 2 346 0 225 108 0 0 chr2 42591780 42591817 -208096037 + (A)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr2 42592047 42592068 -208095786 + AT_rich Low_complexity Low_complexity 1 21 0 8240 134 22 4 chr2 42592370 42593632 -208094222 + Tigger1 DNA MER2_type 26 1310 -1108 7247 40 0 0 chr2 42593644 42594707 -208093147 - L1PA4 LINE L1 -3 6152 5086 13842 33 0 0 chr2 42594707 42596363 -208091491 + L1PA4 LINE L1 3427 5082 -1064 6344 154 29 4 chr2 42596363 42597458 -208090396 + Tigger1 DNA MER2_type 1295 2417 -1 234 286 191 42 chr2 42597544 42597712 -208090142 - LTR50 LTR ERVL -498 297 105 1041 217 188 5 chr2 42597738 42598106 -208089748 + MER63B DNA MER1_type 2 436 0 259 230 54 0 chr2 42598108 42598182 -208089672 - LTR50 LTR ERVL -717 78 1 1143 307 89 35 chr2 42598839 42599126 -208088728 - ERVL LTR ERVL -743 5021 4751 1977 202 33 76 chr2 42599126 42599705 -208088149 - MLT2B3 LTR ERVL 0 554 1 1143 307 89 35 chr2 42599705 42599968 -208087886 - ERVL LTR ERVL -1013 4751 4441 555 244 81 35 chr2 42600016 42600213 -208087641 + L1MA10 LINE L1 6111 6316 -18 302 240 170 10 chr2 42600241 42600341 -208087513 - LTR50 LTR ERVL -592 203 88 598 346 107 54 chr2 42600488 42601253 -208086601 - L2 LINE L2 -21 3251 2432 649 307 158 37 chr2 42601666 42602122 -208085732 + LTR33 LTR ERVL 1 511 -10 868 257 28 9 chr2 42602221 42602439 -208085415 - MER58A DNA MER1_type -2 222 1 23 0 0 0 chr2 42602909 42602932 -208084922 + AT_rich Low_complexity Low_complexity 1 23 0 385 285 114 14 chr2 42603765 42603918 -208083936 - MIR SINE MIR -58 204 37 27 29 0 0 chr2 42604179 42604213 -208083641 + AT_rich Low_complexity Low_complexity 1 34 0 449 303 107 30 chr2 42604255 42604489 -208083365 - MIR SINE MIR -4 258 7 678 334 126 12 chr2 42605127 42605672 -208082182 + L2 LINE L2 2646 3251 -62 180 0 0 0 chr2 42605975 42605995 -208081859 + (GAA)n Simple_repeat Simple_repeat 3 22 0 231 185 0 37 chr2 42606116 42606197 -208081657 + GA-rich Low_complexity Low_complexity 3 80 0 431 295 195 9 chr2 42607203 42607413 -208080441 - MIR SINE MIR 0 262 14 210 71 0 0 chr2 42608151 42608179 -208079675 + (A)n Simple_repeat Simple_repeat 1 28 0 321 320 29 10 chr2 42608302 42608405 -208079449 + MLT1J LTR MaLR 240 344 -167 302 365 76 14 chr2 42609422 42609633 -208078221 - HAL1b LINE L1 -443 905 682 279 353 65 5 chr2 42610900 42611076 -208076778 - MIR3 SINE MIR -32 176 21 36 23 0 0 chr2 42611116 42611159 -208076695 + AT_rich Low_complexity Low_complexity 1 43 0 2087 191 54 92 chr2 42611489 42612140 -208075714 - MLT1E2 LTR MaLR 0 626 1 5795 146 7 32 chr2 42612782 42614130 -208073724 - L1PA16 LINE L1 -9 6157 4842 2465 81 0 0 chr2 42615531 42615840 -208072014 + AluY SINE Alu 1 309 -2 21 89 0 0 chr2 42617188 42617244 -208070610 + AT_rich Low_complexity Low_complexity 1 56 0 3246 161 65 3 chr2 42617411 42618008 -208069846 + L1PA16 LINE L1 5524 6157 -9 999 292 86 28 chr2 42618280 42618712 -208069142 + MLT1C LTR MaLR 6 462 -5 183 80 0 0 chr2 42618733 42618758 -208069096 + (T)n Simple_repeat Simple_repeat 1 25 0 1727 179 15 80 chr2 42618760 42619162 -208068692 - MLT1B LTR MaLR 0 390 15 703 142 0 13 chr2 42619174 42619329 -208068525 + (TCCC)n Simple_repeat Simple_repeat 3 155 0 272 342 26 53 chr2 42619829 42619981 -208067873 - MLT1K LTR MaLR -433 155 8 350 341 7 30 chr2 42620229 42620364 -208067490 + MIR3 SINE MIR 72 203 -5 182 170 0 43 chr2 42620653 42620700 -208067154 + (CATA)n Simple_repeat Simple_repeat 3 47 0 22 35 0 0 chr2 42621481 42621510 -208066344 + AT_rich Low_complexity Low_complexity 1 29 0 210 71 0 0 chr2 42622024 42622052 -208065802 + (GA)n Simple_repeat Simple_repeat 2 29 0 1237 275 96 54 chr2 42622576 42623129 -208064725 + L2 LINE L2 1837 2412 -902 301 280 64 55 chr2 42623217 42623453 -208064401 + L1MEc LINE L1 1714 1951 -4445 26 0 0 0 chr2 42623525 42623551 -208064303 + AT_rich Low_complexity Low_complexity 1 26 0 1885 138 7 0 chr2 42623551 42623827 -208064027 - AluY SINE Alu -33 278 1 25 31 0 0 chr2 42626506 42626538 -208061316 + AT_rich Low_complexity Low_complexity 1 32 0 1753 298 24 11 chr2 42626624 42627183 -208060671 + L1M3a LINE L1 2 743 -5212 6675 247 61 32 chr2 42627267 42628277 -208059577 + L1M3a LINE L1 318 1297 -4737 1398 218 0 35 chr2 42628277 42628593 -208059261 + AluJo SINE Alu 1 305 -7 6675 247 61 32 chr2 42628593 42629416 -208058438 + L1M3a LINE L1 1297 2095 -3939 1129 43 0 0 chr2 42629416 42629556 -208058298 + L1PA8 LINE L1 6027 6166 -6 6675 247 61 32 chr2 42629556 42630468 -208057386 + L1M3a LINE L1 2095 2886 -3148 1761 142 71 0 chr2 42630468 42630736 -208057118 - AluSx SINE Alu -25 287 1 6675 247 61 32 chr2 42630736 42631695 -208056159 + L1M3a LINE L1 2886 3816 -2218 1470 212 139 42 chr2 42631692 42631995 -208055859 - L1M3 LINE L1 -402 6276 6004 * 2465 114 3 16 chr2 42631995 42632364 -208055490 + THE1B LTR MaLR 1 364 0 1470 212 139 42 chr2 42632364 42632484 -208055370 - L1M3 LINE L1 -674 6004 5897 1876 124 0 0 chr2 42632484 42632750 -208055104 - AluSx SINE Alu -13 299 34 357 219 189 6 chr2 42632750 42632914 -208054940 - L1M3 LINE L1 -4154 2492 2299 2962 242 78 80 chr2 42632931 42633870 -208053984 - L1M3 LINE L1 -4465 2181 1242 1638 201 17 0 chr2 42633870 42634164 -208053690 - AluJb SINE Alu -11 301 3 2962 242 78 80 chr2 42634164 42635301 -208052553 - L1M3 LINE L1 -5404 1242 72 370 210 84 28 chr2 42635396 42635539 -208052315 - L1MEc LINE L1 -2822 3393 3243 * 966 172 45 11 chr2 42635534 42635874 -208051980 - L1MEc LINE L1 -814 5594 1793 5182 165 32 8 chr2 42635892 42636893 -208050961 - L1MA4 LINE L1 -22 6278 5254 10769 195 45 10 chr2 42636894 42639317 -208048537 + L1MA4 LINE L1 2724 5232 -914 511 284 37 61 chr2 42639311 42639677 -208048177 - L1MEc LINE L1 -4730 1666 1148 * 33 0 0 0 chr2 42639696 42639729 -208048125 + AT_rich Low_complexity Low_complexity 1 33 0 1385 260 89 50 chr2 42639936 42640032 -208047822 - L1MEc LINE L1 -5229 1167 1076 2140 128 3 0 chr2 42640032 42640338 -208047516 - AluSg SINE Alu -3 307 1 1385 260 89 50 chr2 42640338 42640738 -208047116 - L1MEc LINE L1 -5320 1076 693 872 264 14 0 chr2 42640738 42640954 -208046900 - MER20 DNA MER1_type 0 219 1 1385 260 89 50 chr2 42640954 42641498 -208046356 - L1MEc LINE L1 -5703 693 45 330 325 8 8 chr2 42641678 42641795 -208046059 - L2 LINE L2 -1068 2246 2130 10257 118 5 1 chr2 42642451 42644786 -208043068 - L1PA8A LINE L1 -1 6130 3810 1172 111 19 87 chr2 42644786 42644993 -208042861 + L1P3 LINE L1 12 204 -5671 6191 156 8 30 chr2 42645037 42646816 -208041038 - L1P3 LINE L1 -3832 2629 517 2183 125 3 0 chr2 42646816 42647127 -208040727 - AluSx SINE Alu 0 312 1 6191 156 8 30 chr2 42647127 42647412 -208040442 - L1P3 LINE L1 -5944 517 227 1073 186 27 9 chr2 42647605 42647825 -208040029 - L1MC1 LINE L1 0 6333 6110 26 0 0 0 chr2 42648156 42648182 -208039672 + AT_rich Low_complexity Low_complexity 1 26 0 207 204 0 0 chr2 42648519 42648568 -208039286 + (CA)n Simple_repeat Simple_repeat 1 49 0 428 310 132 50 chr2 42648704 42649023 -208038831 - L2 LINE L2 -799 2515 2171 760 195 72 81 chr2 42649700 42649739 -208038115 + MER20 DNA MER1_type 1 39 -180 739 193 44 6 chr2 42649739 42649920 -208037934 - MER53 DNA DNA 0 189 2 760 195 72 81 chr2 42649920 42650101 -208037753 + MER20 DNA MER1_type 39 219 0 22 0 0 0 chr2 42650617 42650639 -208037215 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 42651439 42651461 -208036393 + AT_rich Low_complexity Low_complexity 1 22 0 2145 254 74 11 chr2 42651509 42652033 -208035821 - MLT1F1 LTR MaLR 0 567 11 253 195 13 26 chr2 42652215 42652292 -208035562 + GA-rich Low_complexity Low_complexity 4 79 0 295 333 50 44 chr2 42652293 42652473 -208035381 - L2 LINE L2 -411 2903 2723 5853 156 14 11 chr2 42652542 42654183 -208033671 + L1PB2 LINE L1 4151 5784 -367 393 22 0 0 chr2 42654183 42654229 -208033625 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 288 0 0 0 chr2 42654228 42654260 -208033594 + (CA)n Simple_repeat Simple_repeat 2 33 0 * 5853 156 14 11 chr2 42654229 42654619 -208033235 + L1PB2 LINE L1 5784 6150 -1 360 0 0 0 chr2 42654771 42654811 -208033043 + (TTA)n Simple_repeat Simple_repeat 3 42 0 285 306 25 87 chr2 42654832 42655028 -208032826 - L2 LINE L2 -769 2545 2362 679 279 53 4 chr2 42656643 42656869 -208030985 + MIR SINE MIR 12 248 -14 311 207 42 22 chr2 42657245 42657337 -208030517 + MLT1F LTR MaLR 436 526 -16 242 388 77 6 chr2 42657735 42657918 -208029936 + L3b LINE CR1 1388 1583 0 29 47 0 0 chr2 42657978 42658021 -208029833 + AT_rich Low_complexity Low_complexity 1 43 0 296 175 41 0 chr2 42658039 42658136 -208029718 + (TA)n Simple_repeat Simple_repeat 2 102 0 4820 140 56 29 chr2 42658365 42658397 -208029457 + L1MA6 LINE L1 5174 5204 -1096 4042 61 72 34 chr2 42658397 42658983 -208028871 - LTR14B LTR ERVK 0 608 1 4820 140 56 29 chr2 42658983 42660006 -208027848 + L1MA6 LINE L1 5204 6254 -46 343 241 106 14 chr2 42660014 42660155 -208027699 + L1M4 LINE L1 2217 2370 -3776 201 356 19 3 chr2 42660481 42660591 -208027263 - MIR SINE MIR -64 144 33 299 155 0 17 chr2 42660650 42660708 -208027146 - MLT1E3 LTR MaLR -2 622 566 276 30 0 0 chr2 42660711 42660744 -208027110 + (TG)n Simple_repeat Simple_repeat 2 34 0 217 329 72 13 chr2 42660947 42661099 -208026755 - L2 LINE L2 -908 2406 2246 273 254 99 0 chr2 42661187 42661258 -208026596 + MIR SINE MIR 11 88 -174 479 222 82 15 chr2 42661284 42661419 -208026435 + L2 LINE L2 1176 1319 -1995 1323 283 79 135 chr2 42661583 42663208 -208024646 + L2 LINE L2 1790 3309 -4 224 326 7 96 chr2 42663339 42663474 -208024380 + MIR3 SINE MIR 40 162 -46 215 190 17 0 chr2 42664059 42664117 -208023737 + (CA)n Simple_repeat Simple_repeat 2 60 0 225 175 0 0 chr2 42665289 42665329 -208022525 + GA-rich Low_complexity Low_complexity 1 40 0 261 353 39 10 chr2 42665667 42665769 -208022085 + MIR SINE MIR 1 105 -157 22 0 0 0 chr2 42666041 42666063 -208021791 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 42667854 42667885 -208019969 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr2 42667905 42667933 -208019921 + AT_rich Low_complexity Low_complexity 1 28 0 407 211 39 10 chr2 42670270 42670374 -208017480 - L1ME4a LINE L1 -46 6075 5969 236 224 15 0 chr2 42671421 42671488 -208016366 + (TA)n Simple_repeat Simple_repeat 2 69 0 251 402 16 0 chr2 42671588 42671710 -208016144 + L2 LINE L2 3149 3272 0 326 301 96 29 chr2 42671728 42671884 -208015970 - MIR SINE MIR -64 144 34 2324 147 52 2 chr2 42672005 42672413 -208015441 + MSTA LTR MaLR 1 428 0 289 326 23 16 chr2 42672481 42672610 -208015244 - MLT1L LTR MaLR -292 323 194 2412 108 0 3 chr2 42672639 42672983 -208014871 - L1PA14 LINE L1 -128 6033 5691 197 329 53 0 chr2 42673356 42673432 -208014422 - L2 LINE L2 -86 3227 3148 246 32 0 0 chr2 42673944 42673975 -208013879 + (TG)n Simple_repeat Simple_repeat 2 32 0 187 386 31 8 chr2 42674944 42675071 -208012783 + MER5B DNA MER1_type 25 154 -24 204 299 28 47 chr2 42675091 42675198 -208012656 - MER5A DNA MER1_type -45 144 40 204 143 0 0 chr2 42675946 42675988 -208011866 + (TA)n Simple_repeat Simple_repeat 2 43 0 422 208 0 123 chr2 42676073 42676203 -208011651 + MER81 DNA DNA 1 114 0 285 347 40 55 chr2 42676267 42676593 -208011261 + MLT1K LTR MaLR 182 502 -86 267 301 0 0 chr2 42676646 42676719 -208011135 + MIR SINE MIR 81 153 -109 250 179 194 30 chr2 42676764 42676831 -208011023 - L2 LINE L2 -1 3312 3235 185 217 43 22 chr2 42677339 42677385 -208010469 + L3 LINE CR1 443 489 -1088 267 31 0 0 chr2 42677493 42677525 -208010329 + (TG)n Simple_repeat Simple_repeat 1 32 0 511 249 127 77 chr2 42678532 42678910 -208008944 + HAL1b LINE L1 331 727 -621 471 74 62 25 chr2 42679074 42679155 -208008699 - L1PA13 LINE L1 0 6163 6080 343 265 75 118 chr2 42679340 42679450 -208008404 + HAL1b LINE L1 985 1098 -250 512 89 0 25 chr2 42679450 42679529 -208008325 - L1PA13 LINE L1 -2 6161 6085 343 265 75 118 chr2 42679529 42679791 -208008063 + HAL1b LINE L1 1098 1341 -7 317 283 0 67 chr2 42680584 42680704 -208007150 - MIR SINE MIR -119 143 32 220 380 14 56 chr2 42682109 42682251 -208005603 - L2 LINE L2 0 3272 3137 35 0 0 0 chr2 42683910 42683945 -208003909 + AT_rich Low_complexity Low_complexity 1 35 0 225 94 0 0 chr2 42684245 42684277 -208003577 + (TC)n Simple_repeat Simple_repeat 1 32 0 354 61 0 0 chr2 42684277 42684326 -208003528 + (TG)n Simple_repeat Simple_repeat 2 50 0 236 327 206 22 chr2 42685073 42685437 -208002417 - L2 LINE L2 -1074 2240 1810 1301 268 100 5 chr2 42685787 42686156 -208001698 + LTR16C LTR ERVL 88 491 0 251 330 48 73 chr2 42686167 42686373 -208001481 - MIR SINE MIR -47 215 15 3851 136 43 18 chr2 42686513 42687189 -208000665 + L1PA16 LINE L1 5465 6157 -9 1578 224 36 58 chr2 42687739 42688261 -207999593 - L1 LINE L1 -1912 4234 3724 1641 166 163 17 chr2 42688268 42688629 -207999225 - MSTA LTR MaLR -14 414 1 663 211 0 6 chr2 42688660 42688821 -207999033 - L1M4c LINE L1 -5151 1233 1074 319 228 25 0 chr2 42688955 42689034 -207998820 + MER5A DNA MER1_type 29 109 -80 8689 151 16 1 chr2 42689549 42691919 -207995935 + L1PA11 LINE L1 3781 6174 0 188 294 65 54 chr2 42692844 42692936 -207994918 + MER5B DNA MER1_type 84 176 -2 524 124 9 26 chr2 42693175 42693288 -207994566 + (TTC)n Simple_repeat Simple_repeat 1 111 0 1897 150 10 22 chr2 42693296 42693610 -207994244 - AluSx SINE Alu -2 310 1 224 348 31 11 chr2 42694194 42694292 -207993562 - MIR SINE MIR -91 117 42 1690 156 32 3 chr2 42694704 42695026 -207992828 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 42695229 42695250 -207992604 + AT_rich Low_complexity Low_complexity 1 21 0 212 364 11 0 chr2 42695453 42695541 -207992313 + MIR SINE MIR 52 140 -122 408 40 0 0 chr2 42695574 42695624 -207992230 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 25 31 0 0 chr2 42695980 42696012 -207991842 + AT_rich Low_complexity Low_complexity 1 32 0 198 0 0 0 chr2 42696012 42696034 -207991820 + (TCTCCC)n Simple_repeat Simple_repeat 4 25 0 459 290 103 50 chr2 42696282 42696641 -207991213 - L1M4 LINE L1 -1481 4665 4288 803 264 67 0 chr2 42696738 42697056 -207990798 + L1ME2 LINE L1 5537 5830 -334 265 220 0 17 chr2 42698264 42698323 -207989531 - MLT1-int LTR MaLR -1309 62 5 1611 237 44 50 chr2 42698893 42699437 -207988417 - LTR55 LTR ERV -7 541 1 273 297 27 45 chr2 42699521 42699584 -207988270 + MIR3 SINE MIR 92 154 -54 1137 233 5 0 chr2 42699584 42699807 -207988047 + MER58A DNA MER1_type 1 224 0 273 297 27 45 chr2 42699807 42699854 -207988000 + MIR3 SINE MIR 154 200 -8 25 0 0 0 chr2 42700560 42700585 -207987269 + AT_rich Low_complexity Low_complexity 1 25 0 191 335 46 64 chr2 42701005 42701178 -207986676 - MIR SINE MIR -64 198 29 804 186 0 0 chr2 42702382 42702511 -207985343 - FLAM_C SINE Alu -4 129 1 236 401 103 8 chr2 42702594 42702993 -207984861 + LTR67 LTR ERVL 36 472 -85 322 309 41 0 chr2 42704162 42704259 -207983595 - L3 LINE CR1 -1 1576 1476 653 197 8 8 chr2 42704641 42704768 -207983086 + FRAM SINE Alu 1 127 -49 26 50 0 0 chr2 42704768 42704808 -207983046 + AT_rich Low_complexity Low_complexity 1 40 0 918 120 0 0 chr2 42705023 42705156 -207982698 + THE1B LTR MaLR 232 364 0 1007 283 177 15 chr2 42705337 42706351 -207981503 + L1MEc LINE L1 1835 3000 -3215 276 146 18 0 chr2 42706521 42706576 -207981278 + L1MA6 LINE L1 6245 6300 0 405 255 176 20 chr2 42706926 42707079 -207980775 - MER5A DNA MER1_type -6 183 7 1662 224 37 67 chr2 42708538 42709046 -207978808 + MLT1D LTR MaLR 1 493 -12 2216 95 7 0 chr2 42709528 42709823 -207978031 + AluY SINE Alu 1 297 -14 21 0 0 0 chr2 42710396 42710417 -207977437 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 42710678 42710701 -207977153 + AT_rich Low_complexity Low_complexity 1 23 0 2781 10 0 0 chr2 42710762 42711067 -207976787 + AluYa5 SINE Alu 1 305 -6 234 362 0 0 chr2 42711586 42711691 -207976163 + (CCA)n Simple_repeat Simple_repeat 1 105 0 24 0 0 0 chr2 42712700 42712724 -207975130 + AT_rich Low_complexity Low_complexity 1 24 0 224 284 23 11 chr2 42712867 42712955 -207974899 + (CATA)n Simple_repeat Simple_repeat 4 92 0 28 79 0 0 chr2 42713051 42713114 -207974740 + AT_rich Low_complexity Low_complexity 1 63 0 489 239 123 0 chr2 42713551 42713681 -207974173 + L2 LINE L2 2315 2460 -854 828 47 19 0 chr2 42713682 42713789 -207974065 - L1PA4 LINE L1 -201 5954 5846 1673 25 10 0 chr2 42713789 42713987 -207973867 + L1PA4 LINE L1 5948 6153 -2 731 264 238 17 chr2 42713987 42714678 -207973176 + L2 LINE L2 2451 3313 0 252 325 26 51 chr2 42714651 42714768 -207973086 - L2 LINE L2 -11 3261 3148 * 311 267 0 13 chr2 42714783 42714858 -207972996 - MIR3 SINE MIR -21 187 114 497 274 26 0 chr2 42715092 42715205 -207972649 + FLAM_A SINE Alu 1 116 -17 1916 123 0 0 chr2 42715710 42715979 -207971875 + AluSq SINE Alu 45 313 0 679 271 102 36 chr2 42716037 42716369 -207971485 + L3 LINE CR1 427 780 -797 585 288 109 48 chr2 42716617 42716947 -207970907 + L3 LINE CR1 800 1149 -428 1763 169 14 0 chr2 42718507 42718797 -207969057 + AluSx SINE Alu 1 294 -18 183 304 72 0 chr2 42719450 42719519 -207968335 - L2 LINE L2 -802 2512 2439 875 294 50 31 chr2 42719532 42720168 -207967686 + L1M4 LINE L1 4698 5345 -801 505 364 37 12 chr2 42720456 42720698 -207967156 - MIR SINE MIR -14 248 1 181 286 41 0 chr2 42722385 42722434 -207965420 - MIR SINE MIR -67 141 91 949 69 8 15 chr2 42724040 42724170 -207963684 + AluY SINE Alu 166 294 -17 303 71 0 0 chr2 42724298 42724340 -207963514 - L1PA13 LINE L1 -367 5798 5757 2206 105 28 25 chr2 42724340 42724700 -207963154 + L1PA13 LINE L1 5802 6163 0 884 281 68 38 chr2 42724859 42725328 -207962526 + HAL1 LINE L1 1280 1762 -745 * 2555 220 64 9 chr2 42725324 42726187 -207961667 - L1MB7 LINE L1 -311 5873 4969 503 266 142 41 chr2 42726231 42726697 -207961157 + HAL1 LINE L1 1980 2492 -15 447 175 48 79 chr2 42728502 42728628 -207959226 - L1MD2 LINE L1 -44 6315 6194 567 176 15 7 chr2 42728699 42728835 -207959019 + CT-rich Low_complexity Low_complexity 3 139 0 1106 273 71 19 chr2 42728868 42729348 -207958506 - L1MDa LINE L1 -4670 1870 1366 207 100 0 0 chr2 42730542 42730572 -207957282 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 611 203 0 38 chr2 42731790 42731923 -207955931 + FLAM_A SINE Alu 6 133 -9 21 0 0 0 chr2 42731923 42731944 -207955910 + AT_rich Low_complexity Low_complexity 1 21 0 335 120 0 0 chr2 42733461 42733511 -207954343 - MADE1 DNA Mariner -30 50 1 204 392 108 18 chr2 42733595 42733761 -207954093 + MIR3 SINE MIR 17 197 -11 369 250 108 40 chr2 42733942 42734118 -207953736 + MER5A DNA MER1_type 1 188 -1 31 0 0 0 chr2 42734778 42734809 -207953045 + AT_rich Low_complexity Low_complexity 1 31 0 270 194 0 0 chr2 42736319 42736391 -207951463 + (TA)n Simple_repeat Simple_repeat 1 72 0 304 323 74 31 chr2 42737318 42737647 -207950207 + L1ME LINE L1 5318 5680 -441 23 0 0 0 chr2 42737706 42737729 -207950125 + AT_rich Low_complexity Low_complexity 1 23 0 2291 50 46 0 chr2 42738159 42738439 -207949415 + AluY SINE Alu 13 305 -6 346 382 58 14 chr2 42738633 42738840 -207949014 - MIR SINE MIR -19 243 28 315 297 30 10 chr2 42740441 42740542 -207947312 + MIR SINE MIR 49 151 -111 218 309 0 0 chr2 42740565 42740620 -207947234 + MER91B DNA MER1_type 1 55 -135 626 180 56 0 chr2 42740635 42740770 -207947084 - MIR SINE MIR -22 240 98 1889 134 7 20 chr2 42740919 42741225 -207946629 + AluSx SINE Alu 1 302 -10 22 0 0 0 chr2 42741823 42741845 -207946009 + AT_rich Low_complexity Low_complexity 1 22 0 354 23 0 0 chr2 42742005 42742048 -207945806 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 561 294 65 45 chr2 42743640 42743885 -207943969 + MIR SINE MIR 13 262 0 2201 74 17 24 chr2 42744158 42744454 -207943400 - AluSc SINE Alu -15 294 1 23 0 0 29 chr2 42744467 42744478 -207943376 + AT_rich Low_complexity Low_complexity 1 11 -22 482 212 18 0 chr2 42744478 42744591 -207943263 - L1MD1 LINE L1 0 6242 6128 23 0 0 29 chr2 42744591 42744613 -207943241 + AT_rich Low_complexity Low_complexity 11 33 0 5992 33 6 0 chr2 42744613 42745337 -207942517 - L1PA4 LINE L1 -8 6147 5420 1590 30 0 0 chr2 42745339 42745557 -207942297 + L1PA4 LINE L1 5235 5452 -703 254 333 8 24 chr2 42745789 42745915 -207941939 + GA-rich Low_complexity Low_complexity 2 125 0 3924 151 9 2 chr2 42747309 42748525 -207939329 + L1P5 LINE L1 4555 5780 -371 297 68 0 0 chr2 42748525 42748569 -207939285 + (TA)n Simple_repeat Simple_repeat 2 45 0 374 0 22 0 chr2 42749013 42749059 -207938795 + (TA)n Simple_repeat Simple_repeat 1 47 0 235 327 100 33 chr2 42749442 42749592 -207938262 + MIR SINE MIR 62 221 -41 5056 134 16 14 chr2 42749604 42750437 -207937417 - Tigger1 DNA MER2_type 0 2418 1585 471 302 107 31 chr2 42750785 42751139 -207936715 + L1MB3 LINE L1 5023 5403 -743 270 229 61 32 chr2 42751194 42751302 -207936552 + L1MB3 LINE L1 5477 5586 -535 892 179 22 0 chr2 42751674 42751853 -207936001 + L1MB3 LINE L1 5991 6173 -10 322 71 0 36 chr2 42752116 42752172 -207935682 + (TA)n Simple_repeat Simple_repeat 2 55 0 221 428 12 6 chr2 42752299 42752465 -207935389 - L3 LINE CR1 -465 1112 946 182 309 29 0 chr2 42754080 42754148 -207933706 - L3 LINE CR1 -769 808 739 1275 262 68 46 chr2 42755769 42756223 -207931631 + MLT2B1 LTR ERVL 1 464 -56 1898 114 12 2 chr2 42756801 42757113 -207930741 - L1P LINE L1 -886 5260 4948 390 57 0 0 chr2 42757813 42757866 -207929988 + (TTTA)n Simple_repeat Simple_repeat 4 56 0 757 244 75 10 chr2 42758009 42758210 -207929644 + MIR SINE MIR 11 224 -38 2154 93 38 0 chr2 42759001 42759290 -207928564 - AluSx SINE Alu -10 302 3 516 234 123 73 chr2 42760883 42761199 -207926655 + L2 LINE L2 1582 1913 -1401 848 234 90 49 chr2 42761199 42761697 -207926157 + LTR50 LTR ERVL 1 669 -126 362 172 54 21 chr2 42761764 42761857 -207925997 - L1MA9 LINE L1 0 6312 6217 2364 179 42 22 chr2 42761857 42762238 -207925616 - LOR1b LTR ERV1 0 461 68 3429 43 0 0 chr2 42762238 42762653 -207925201 - L1PA3 LINE L1 -3 6152 5738 2364 179 42 22 chr2 42762653 42762723 -207925131 - LOR1b LTR ERV1 -393 68 1 4647 166 23 6 chr2 42762723 42762781 -207925073 - L1MA9 LINE L1 -93 6219 6163 207 0 0 0 chr2 42762781 42762804 -207925050 + (TG)n Simple_repeat Simple_repeat 2 24 0 4647 166 23 6 chr2 42762804 42763585 -207924269 - L1MA9 LINE L1 -149 6163 5366 2501 263 120 19 chr2 42763620 42764719 -207923135 + L2 LINE L2 1909 3124 -189 279 0 0 0 chr2 42764837 42764868 -207922986 + (TG)n Simple_repeat Simple_repeat 2 32 0 1160 193 102 58 chr2 42765357 42765788 -207922066 + LTR7 LTR ERV1 1 450 0 3642 213 84 109 chr2 42765788 42766270 -207921584 + HERVH LTR ERV1 1 494 -7219 180 77 0 0 chr2 42766270 42766296 -207921558 + (CCCCCA)n Simple_repeat Simple_repeat 1 26 0 3642 213 84 109 chr2 42766296 42767919 -207919935 + HERVH LTR ERV1 494 2052 -5661 410 271 163 24 chr2 42768649 42768979 -207918875 - L1ME LINE L1 -509 5657 5283 996 191 22 11 chr2 42769137 42769320 -207918534 + AluJo SINE Alu 120 304 -8 625 165 9 26 chr2 42770269 42770384 -207917470 + MER81 DNA DNA 2 114 0 292 311 165 0 chr2 42770457 42770560 -207917294 - L2 LINE L2 -2 3270 3151 246 344 0 0 chr2 42771526 42771590 -207916264 + L2 LINE L2 3201 3264 -8 244 267 53 0 chr2 42772265 42772340 -207915514 + MIR SINE MIR 184 262 0 373 294 162 0 chr2 42773287 42773423 -207914431 + MIR SINE MIR 31 188 -74 441 396 57 8 chr2 42774461 42774726 -207913128 - L2 LINE L2 0 3272 2995 505 17 0 0 chr2 42774940 42775032 -207912822 + L1PA4 LINE L1 6087 6178 0 251 259 74 0 chr2 42775065 42775173 -207912681 - L1MC4 LINE L1 -3 8039 7924 2117 244 44 64 chr2 42775355 42775790 -207912064 - L1ME2 LINE L1 -1 6163 5754 2383 147 75 0 chr2 42775790 42776192 -207911662 - MSTB1 LTR MaLR 0 432 1 2117 244 44 64 chr2 42776192 42776656 -207911198 - L1ME2 LINE L1 -410 5754 5282 1797 248 74 16 chr2 42776660 42777394 -207910460 - L1ME2 LINE L1 -920 5226 4451 920 220 65 79 chr2 42777400 42777522 -207910332 + MLT1A2 LTR MaLR 8 130 -244 312 23 23 0 chr2 42777522 42777566 -207910288 - L1PA4 LINE L1 -3 6152 6108 920 220 65 79 chr2 42777566 42777811 -207910043 + MLT1A2 LTR MaLR 130 370 -4 256 208 81 102 chr2 42777816 42778013 -207909841 - L1ME2 LINE L1 -1691 4455 4263 1130 280 129 25 chr2 42778035 42778325 -207909529 - MLT1G1 LTR MaLR -32 563 305 306 0 0 0 chr2 42778325 42778359 -207909495 + (GA)n Simple_repeat Simple_repeat 1 34 0 1130 280 129 25 chr2 42778359 42778578 -207909276 - MLT1G1 LTR MaLR -290 305 1 1475 266 104 35 chr2 42778578 42778684 -207909170 - L1ME2 LINE L1 -1876 4270 4173 2435 65 7 0 chr2 42778684 42778993 -207908861 - AluY SINE Alu 0 311 1 1475 266 104 35 chr2 42778993 42779667 -207908187 - L1ME2 LINE L1 -1973 4173 3436 244 198 81 23 chr2 42779726 42779812 -207908042 - L1ME2 LINE L1 -2859 3287 3197 411 244 13 0 chr2 42781111 42781189 -207906665 - AluJ/FLAM SINE Alu -223 79 1 23 33 0 0 chr2 42781197 42781227 -207906627 + AT_rich Low_complexity Low_complexity 1 30 0 295 297 109 63 chr2 42781260 42781499 -207906355 + MIR SINE MIR 13 262 0 2196 77 7 20 chr2 42781886 42782186 -207905668 - AluY SINE Alu -15 296 1 23 0 0 0 chr2 42783131 42783154 -207904700 + AT_rich Low_complexity Low_complexity 1 23 0 276 321 83 42 chr2 42783816 42783984 -207903870 + MIR3 SINE MIR 9 183 -25 1039 107 0 0 chr2 42784254 42784403 -207903451 - AluSg/x SINE Alu -5 305 157 2271 110 10 0 chr2 42785189 42785498 -207902356 - AluSx SINE Alu 0 312 1 2478 188 93 31 chr2 42785533 42785623 -207902231 - L1MC3 LINE L1 -7 7778 7695 373 175 62 0 chr2 42785623 42785720 -207902134 - L1PA8 LINE L1 0 6172 6070 2478 188 93 31 chr2 42785720 42786240 -207901614 - L1MC3 LINE L1 -90 7695 7130 2325 100 0 3 chr2 42786473 42786783 -207901071 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr2 42787134 42787155 -207900699 + AT_rich Low_complexity Low_complexity 1 21 0 1641 132 18 7 chr2 42787667 42787947 -207899907 + L1MA5 LINE L1 6012 6294 -6 234 204 10 112 chr2 42788011 42788109 -207899745 + L2 LINE L2 3225 3312 -1 4144 153 42 46 chr2 42788769 42789736 -207898118 + pTR5 LTR ERV1 741 2025 -413 274 255 31 20 chr2 42789736 42789834 -207898020 + LTR30 LTR ERV1 544 642 -80 1483 101 4 9 chr2 42789837 42790064 -207897790 + pTR5 LTR ERV1 172 397 -2041 2203 114 7 3 chr2 42790341 42790647 -207897207 + AluSg SINE Alu 1 307 -3 1880 208 109 36 chr2 42790659 42791126 -207896728 + MLT1D LTR MaLR 4 504 -1 230 293 91 0 chr2 42791231 42791330 -207896524 - L2 LINE L2 -199 3073 2966 379 208 9 9 chr2 42791330 42791436 -207896418 + G-rich Low_complexity Low_complexity 5 110 0 25 75 0 0 chr2 42792819 42792872 -207894982 + AT_rich Low_complexity Low_complexity 1 53 0 25 0 0 0 chr2 42793245 42793270 -207894584 + AT_rich Low_complexity Low_complexity 1 25 0 722 119 0 0 chr2 42795307 42795416 -207892438 - L1P LINE L1 -1156 4990 4882 4761 60 2 20 chr2 42795416 42796050 -207891804 + L1PA8 LINE L1 5546 6171 -1 5424 109 16 22 chr2 42796264 42797151 -207890703 - L1MA5A LINE L1 -5 6292 5412 1236 219 32 74 chr2 42800589 42801118 -207886736 - Charlie4a DNA MER1_type 0 508 2 564 272 36 28 chr2 42801148 42801200 -207886654 - L1ME LINE L1 -580 5582 5532 388 77 0 240 chr2 42801200 42801304 -207886550 + MADE1 DNA Mariner 2 80 0 564 272 36 28 chr2 42801304 42801551 -207886303 - L1ME LINE L1 -630 5532 5260 504 244 8 25 chr2 42801766 42801939 -207885915 - MER63A DNA MER1_type 0 210 38 578 303 106 24 chr2 42802044 42802797 -207885057 - L1ME LINE L1 -1230 4916 4102 337 338 67 13 chr2 42802992 42803528 -207884326 - L1ME LINE L1 -2283 3863 3299 746 231 38 71 chr2 42803730 42803968 -207883886 + MLT1D LTR MaLR 1 230 -275 702 191 21 14 chr2 42803966 42804107 -207883747 + MLT1D LTR MaLR 364 505 0 * 22 0 0 0 chr2 42804200 42804222 -207883632 + AT_rich Low_complexity Low_complexity 1 22 0 513 0 0 0 chr2 42804589 42804646 -207883208 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 410 306 32 12 chr2 42804721 42804773 -207883081 - L1ME LINE L1 -3759 2387 2338 1806 164 14 0 chr2 42804773 42805060 -207882794 - AluSx SINE Alu -19 293 3 410 306 32 12 chr2 42805060 42805259 -207882595 - L1ME LINE L1 -3808 2338 2131 228 351 34 34 chr2 42807169 42807317 -207880537 - MIR SINE MIR -92 170 23 237 287 223 0 chr2 42807441 42807598 -207880256 - MIR SINE MIR -63 199 8 199 291 55 73 chr2 42807665 42807775 -207880079 + MIR3 SINE MIR 95 202 -6 21 0 0 0 chr2 42807790 42807811 -207880043 + AT_rich Low_complexity Low_complexity 1 21 0 275 240 13 13 chr2 42808242 42808317 -207879537 + MLT1D LTR MaLR 431 505 0 806 211 56 56 chr2 42808415 42808681 -207879173 + L1MD3 LINE L1 7730 7995 0 2249 118 0 0 chr2 42808726 42809032 -207878822 - AluSg SINE Alu 0 310 5 307 265 21 37 chr2 42809471 42809596 -207878258 - MIR SINE MIR -80 128 28 276 306 174 0 chr2 42809829 42809950 -207877904 + LTR33A LTR ERVL 19 160 -361 198 156 0 0 chr2 42810351 42810396 -207877458 + (CA)n Simple_repeat Simple_repeat 2 46 0 577 262 21 61 chr2 42810508 42810636 -207877218 + Charlie7 DNA MER1_type 1500 1632 -980 2348 90 0 0 chr2 42810636 42810925 -207876929 - AluSc SINE Alu -20 289 1 577 262 21 61 chr2 42810925 42811075 -207876779 + Charlie7 DNA MER1_type 1632 1767 -845 866 305 72 19 chr2 42811297 42811838 -207876016 + L1ME LINE L1 589 1158 -5214 * 30092 57 4 1 chr2 42811836 42815641 -207872213 + L1P LINE L1 2 3816 -2330 4405 32 0 0 chr2 42815641 42816154 -207871700 + L1PA4 LINE L1 5633 6155 0 569 307 53 26 chr2 42816159 42816589 -207871265 + L1ME LINE L1 1042 1483 -4901 234 91 0 0 chr2 42816590 42816623 -207871231 + (CA)n Simple_repeat Simple_repeat 2 34 0 11037 204 33 22 chr2 42817603 42819546 -207868308 + L1PA13 LINE L1 156 2176 -4621 2203 121 0 13 chr2 42819546 42819859 -207867995 + AluSc SINE Alu 1 309 0 11037 204 33 22 chr2 42819859 42820987 -207866867 + L1PA13 LINE L1 2176 3290 -3507 2278 138 5 36 chr2 42820987 42821110 -207866744 - THE1C LTR MaLR 0 375 250 2194 134 0 3 chr2 42821110 42821423 -207866431 + AluSx SINE Alu 1 312 0 2278 138 5 36 chr2 42821423 42821684 -207866170 - THE1C LTR MaLR -125 250 3 8196 127 18 68 chr2 42821686 42823066 -207864788 - THE1C-int LTR MaLR 0 1580 272 2378 86 3 0 chr2 42823066 42823358 -207864496 + AluY SINE Alu 2 294 -17 8196 127 18 68 chr2 42823358 42823402 -207864452 - THE1C-int LTR MaLR -1308 272 227 11128 181 19 47 chr2 42823402 42826433 -207861421 + L1PA13 LINE L1 3789 6810 -4 23 33 0 0 chr2 42826435 42826465 -207861389 + AT_rich Low_complexity Low_complexity 1 30 0 2326 108 0 6 chr2 42826954 42827268 -207860586 - AluSx SINE Alu 0 312 1 255 260 55 62 chr2 42827309 42827455 -207860399 - L2 LINE L2 -7 3306 3162 273 391 161 0 chr2 42827488 42827767 -207860087 - L2 LINE L2 -337 2977 2654 280 235 306 0 chr2 42828067 42828165 -207859689 + MER63 DNA MER1_type 12 765 -71 950 191 41 20 chr2 42828221 42828467 -207859387 - L1M4 LINE L1 -946 5200 4950 536 227 163 64 chr2 42828593 42828968 -207858886 - LTR37B LTR ERV1 -6 462 51 1110 193 20 0 chr2 42830224 42830468 -207857386 - L1MA8 LINE L1 -4 6287 6039 2082 149 0 0 chr2 42830907 42831215 -207856639 + AluSx SINE Alu 1 308 -4 303 360 0 0 chr2 42831385 42831485 -207856369 + MIR3 SINE MIR 87 186 -22 417 296 90 16 chr2 42831561 42831750 -207856104 - LTR16A LTR ERVL -5 445 243 17279 31 0 0 chr2 42831750 42833843 -207854011 - L1PA3 LINE L1 -1755 4391 2299 8300 27 2 0 chr2 42833843 42835592 -207852262 + L1PA3 LINE L1 4405 6154 -1 763 280 11 5 chr2 42835592 42835781 -207852073 - LTR16A LTR ERVL -195 255 66 219 278 189 0 chr2 42836285 42836375 -207851479 - L2 LINE L2 -6 3307 3201 2093 113 3 0 chr2 42836959 42837263 -207850591 + AluSg SINE Alu 1 305 0 1235 310 96 47 chr2 42837274 42838079 -207849775 + L2 LINE L2 1770 2629 -685 969 204 63 47 chr2 42838079 42838334 -207849520 + MIR SINE MIR 2 260 -2 1235 310 96 47 chr2 42838334 42838479 -207849375 + L2 LINE L2 2629 2766 -548 252 248 223 13 chr2 42838551 42838708 -207849146 + L2 LINE L2 3124 3313 0 198 103 0 0 chr2 42839485 42839514 -207848340 + (TAA)n Simple_repeat Simple_repeat 1 29 0 507 257 63 53 chr2 42839527 42839733 -207848121 - MIR SINE MIR -21 241 34 180 287 119 59 chr2 42839921 42840022 -207847832 - L2 LINE L2 -174 3098 2992 12951 146 8 8 chr2 42840151 42844013 -207843841 + HERVH LTR ERV1 2294 6091 -1622 4804 153 8 6 chr2 42843999 42844798 -207843056 + HERVH LTR ERV1 6914 7713 0 * 1184 207 96 40 chr2 42844798 42845224 -207842630 + LTR7 LTR ERV1 1 450 0 1294 276 30 21 chr2 42845586 42846020 -207841834 + L1ME1 LINE L1 66 503 -5893 2530 231 64 34 chr2 42846027 42847175 -207840679 + L1ME1 LINE L1 5050 6231 -4 552 276 35 22 chr2 42847404 42847636 -207840218 - L1MB8 LINE L1 -32 6146 5912 500 194 32 48 chr2 42847637 42847761 -207840093 - L1MD2 LINE L1 -109 6250 6129 479 279 28 48 chr2 42847736 42847987 -207839867 - L1M4c LINE L1 -4704 1680 1435 * 256 263 88 91 chr2 42848313 42849183 -207838671 + L1M4 LINE L1 4472 5339 -807 22 0 0 0 chr2 42849571 42849593 -207838261 + AT_rich Low_complexity Low_complexity 1 22 0 432 240 19 0 chr2 42850594 42850698 -207837156 - MER117 DNA MER1_type -91 106 1 221 282 113 48 chr2 42850710 42850834 -207837020 + MIR SINE MIR 65 196 -66 24 85 0 0 chr2 42850920 42850979 -207836875 + AT_rich Low_complexity Low_complexity 1 59 0 2126 181 18 0 chr2 42850991 42851390 -207836464 - L1MB2 LINE L1 0 6171 5766 3162 203 21 32 chr2 42851437 42852637 -207835217 - L1MB8 LINE L1 -362 5809 4629 296 288 17 34 chr2 42854371 42854489 -207833365 + GA-rich Low_complexity Low_complexity 1 116 0 2550 170 43 4 chr2 42854531 42855044 -207832810 - L1MA5A LINE L1 -3 6294 5762 1725 151 56 22 chr2 42855045 42855369 -207832485 - THE1C LTR MaLR -40 335 1 3108 146 31 55 chr2 42855370 42855535 -207832319 - L1MA5A LINE L1 -549 5748 5581 2191 135 34 63 chr2 42855535 42855980 -207831874 - MSTB1 LTR MaLR 0 432 1 3108 146 31 55 chr2 42855980 42856902 -207830952 - L1MA5A LINE L1 -716 5581 4688 2200 169 39 8 chr2 42856900 42857386 -207830468 + L1MA5A LINE L1 4189 4689 -1457 * 239 333 58 42 chr2 42858316 42858436 -207829418 - MIR SINE MIR -72 190 69 487 279 25 8 chr2 42858730 42858852 -207829002 - MIR SINE MIR -65 143 20 262 288 14 0 chr2 42859884 42859957 -207827897 + L2 LINE L2 3238 3311 -2 805 194 106 0 chr2 42861074 42861234 -207826620 + MER45A DNA AcHobo 2 178 0 299 303 0 0 chr2 42861753 42861829 -207826025 + MIR SINE MIR 187 262 0 273 326 70 16 chr2 42861966 42862095 -207825759 + MIR SINE MIR 113 248 -14 4187 130 8 0 chr2 42862228 42862835 -207825019 - LTR9 LTR ERV1 0 612 1 222 261 77 0 chr2 42862853 42862918 -207824936 + L2 LINE L2 2979 3048 -224 401 313 67 7 chr2 42863056 42863206 -207824648 + MLT1G1 LTR MaLR 25 183 -412 342 161 46 0 chr2 42863212 42863299 -207824555 + GA-rich Low_complexity Low_complexity 4 94 0 2136 143 60 5 chr2 42863395 42863765 -207824089 - L1M2 LINE L1 -570 5742 5353 220 250 26 0 chr2 42864925 42865001 -207822853 + (TA)n Simple_repeat Simple_repeat 1 78 0 702 81 0 0 chr2 42866553 42866652 -207821202 - L1MA2 LINE L1 0 6304 6206 1109 236 5 5 chr2 42866652 42866864 -207820990 - L1M1 LINE L1 -5967 1598 1387 2253 246 65 58 chr2 42866888 42867999 -207819855 - L1M4 LINE L1 -785 5361 4187 227 258 72 10 chr2 42868059 42868156 -207819698 + HAL1 LINE L1 48 150 -2357 2111 230 58 6 chr2 42868185 42868668 -207819186 + LTR53 LTR ERVL 1 508 -11 449 319 128 22 chr2 42868727 42869094 -207818760 + HAL1 LINE L1 270 675 -1832 1797 216 2 62 chr2 42869099 42869458 -207818396 + MLT2D LTR ERVL 6 336 -78 189 0 0 0 chr2 42869458 42869479 -207818375 + (TC)n Simple_repeat Simple_repeat 2 22 0 1797 216 2 62 chr2 42869479 42869554 -207818300 + MLT2D LTR ERVL 336 414 0 983 207 57 0 chr2 42869638 42869831 -207818023 + MER20 DNA MER1_type 1 204 -15 440 275 96 33 chr2 42870234 42870474 -207817380 + HAL1 LINE L1 1502 1756 -751 387 276 88 35 chr2 42870476 42870704 -207817150 + HAL1 LINE L1 1838 2077 -430 2476 64 0 0 chr2 42870715 42871011 -207816843 + AluY SINE Alu 1 296 -15 976 184 26 0 chr2 42871234 42871424 -207816430 + MSTD LTR MaLR 198 392 -4 1983 107 24 7 chr2 42871611 42871901 -207815953 - AluSc SINE Alu -14 295 1 23 33 0 0 chr2 42872035 42872065 -207815789 + AT_rich Low_complexity Low_complexity 1 30 0 721 171 44 25 chr2 42874000 42874158 -207813696 + LTR41 LTR ERVL 1 161 -612 395 224 211 36 chr2 42874565 42874788 -207813066 + LTR41 LTR ERVL 506 767 -6 272 298 242 6 chr2 42874846 42875007 -207812847 - MIR SINE MIR -13 249 51 27 29 0 0 chr2 42875779 42875813 -207812041 + AT_rich Low_complexity Low_complexity 1 34 0 260 326 41 0 chr2 42876342 42876440 -207811414 - MIR3 SINE MIR -12 196 95 232 139 93 0 chr2 42876466 42876509 -207811345 - MLT2C2 LTR ERVL 0 464 418 342 0 0 0 chr2 42876511 42876549 -207811305 + (TG)n Simple_repeat Simple_repeat 2 39 0 436 231 103 0 chr2 42876582 42876699 -207811155 - MLT2B1 LTR ERVL -31 489 361 3135 160 11 15 chr2 42876699 42877242 -207810612 - ERVL LTR ERVL -274 5490 4950 542 305 50 35 chr2 42877420 42877797 -207810057 - L1MC/D LINE L1 -2109 5699 5317 1767 203 15 25 chr2 42878218 42878617 -207809237 + L1MD3 LINE L1 7431 7825 -170 339 249 119 43 chr2 42878665 42878850 -207809004 - L1ME4a LINE L1 -225 5896 5698 235 326 11 21 chr2 42878901 42878996 -207808858 - L1ME4a LINE L1 -2137 5671 5578 776 195 129 9 chr2 42879160 42879261 -207808593 - L1MA9 LINE L1 -38 6274 6186 221 57 29 0 chr2 42879261 42879296 -207808558 + (TG)n Simple_repeat Simple_repeat 1 36 0 776 195 129 9 chr2 42879296 42879404 -207808450 - L1MA9 LINE L1 -126 6186 6040 4552 169 28 76 chr2 42880170 42880663 -207807191 - L1MA9 LINE L1 -10 6302 5787 2351 132 25 0 chr2 42880663 42881028 -207806826 + THE1C LTR MaLR 2 375 0 4552 169 28 76 chr2 42881028 42881054 -207806800 - L1MA9 LINE L1 -525 5787 5761 243 0 0 0 chr2 42881054 42881081 -207806773 + (TG)n Simple_repeat Simple_repeat 2 28 0 4552 169 28 76 chr2 42881081 42882388 -207805466 - L1MA9 LINE L1 -551 5761 4565 2587 175 35 1 chr2 42882385 42883081 -207804773 - L1PB1 LINE L1 -681 5470 4760 * 4633 102 15 3 chr2 42883081 42883755 -207804099 + L1PB1 LINE L1 5465 6149 -2 387 277 124 44 chr2 42883863 42883935 -207803919 - L1MEd LINE L1 -5611 508 443 1905 150 0 19 chr2 42883935 42884242 -207803612 - AluSx SINE Alu -9 303 3 387 277 124 44 chr2 42884242 42884418 -207803436 - L1MEd LINE L1 -5676 443 240 370 273 36 9 chr2 42884456 42884566 -207803288 - L1MEd LINE L1 -6001 118 6 343 250 95 34 chr2 42884619 42884678 -207803176 - L1MA10 LINE L1 0 6334 6276 1615 234 29 17 chr2 42884678 42885097 -207802757 - L1ME1 LINE L1 -56 6110 5687 526 195 49 8 chr2 42885114 42885289 -207802565 - L1 LINE L1 -1568 4578 4397 * 631 239 5 16 chr2 42885259 42885443 -207802411 - L1 LINE L1 -1661 4485 4304 * 2935 215 24 1 chr2 42885434 42886137 -207801717 + L1 LINE L1 3199 3917 -2229 2128 231 12 20 chr2 42886287 42886789 -207801065 - LTR31 LTR ERV1 -17 602 105 368 290 62 49 chr2 42887583 42887745 -207800109 + MIR3 SINE MIR 39 202 -6 23 54 0 0 chr2 42888324 42888361 -207799493 + AT_rich Low_complexity Low_complexity 1 37 0 230 208 0 0 chr2 42888514 42888562 -207799292 + MER116 DNA Mariner 5 52 -28 213 39 0 0 chr2 42889663 42889689 -207798165 + (TAGA)n Simple_repeat Simple_repeat 3 28 0 342 300 89 32 chr2 42889689 42889870 -207797984 - L1M4 LINE L1 -1537 4609 4415 35 24 0 0 chr2 42889893 42889935 -207797919 + AT_rich Low_complexity Low_complexity 1 42 0 2039 135 0 7 chr2 42890000 42890304 -207797550 + AluSx SINE Alu 1 302 -10 217 329 61 0 chr2 42890319 42890401 -207797453 - MIR SINE MIR -108 154 68 212 51 0 51 chr2 42892135 42892174 -207795680 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 4772 11 2 4 chr2 42892516 42893061 -207794793 - L1PA3 LINE L1 -3 6152 5609 21331 159 29 16 chr2 42895165 42902776 -207785078 - L1MA1 LINE L1 0 7721 6 22 0 0 0 chr2 42902864 42902886 -207784968 + AT_rich Low_complexity Low_complexity 1 22 0 459 319 37 24 chr2 42903018 42903316 -207784538 + L1MC4a LINE L1 5581 5882 -1926 25 51 0 0 chr2 42903490 42903529 -207784325 + AT_rich Low_complexity Low_complexity 1 39 0 25 51 0 0 chr2 42903588 42903627 -207784227 + AT_rich Low_complexity Low_complexity 1 39 0 1673 149 43 25 chr2 42903994 42904370 -207783484 + Tigger3(Golem) DNA MER2_type 1 3028 -1 2726 153 19 0 chr2 42905000 42905469 -207782385 + L1MB3 LINE L1 5697 6174 -9 21 0 0 0 chr2 42905953 42905974 -207781880 + AT_rich Low_complexity Low_complexity 1 21 0 4510 149 5 32 chr2 42908308 42908816 -207779038 + L1PA12 LINE L1 4787 5307 -861 2301 89 0 7 chr2 42908816 42909119 -207778735 + AluSg1 SINE Alu 1 301 -8 4510 149 5 32 chr2 42909119 42909810 -207778044 + L1PA12 LINE L1 5307 5958 -210 7948 136 18 2 chr2 42909978 42911255 -207776599 + HSMAR2 DNA Mariner 4 1300 -2 2194 140 0 0 chr2 42912027 42912335 -207775519 - AluSx SINE Alu -4 308 1 1292 131 0 0 chr2 42912630 42912806 -207775048 - AluSx SINE Alu -136 176 1 2333 174 13 7 chr2 42913083 42913537 -207774317 + L1MA8 LINE L1 5825 6281 -10 1369 114 50 23 chr2 42913792 42914011 -207773843 - MER30 DNA MER1_type -4 226 2 24 0 0 0 chr2 42916873 42916897 -207770957 + AT_rich Low_complexity Low_complexity 1 24 0 2311 108 0 3 chr2 42916950 42917255 -207770599 + AluSg SINE Alu 1 304 -6 3473 132 9 17 chr2 42917452 42917983 -207769871 - MER1A DNA MER1_type 0 527 1 193 57 57 0 chr2 42919299 42919334 -207768520 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 384 284 63 16 chr2 42919713 42919840 -207768014 + MIR3 SINE MIR 71 203 -5 2230 109 3 3 chr2 42920451 42920753 -207767101 - AluSx SINE Alu -10 302 1 221 255 20 20 chr2 42921062 42921113 -207766741 + L2 LINE L2 3207 3257 -15 21 36 0 0 chr2 42921273 42921301 -207766553 + AT_rich Low_complexity Low_complexity 1 28 0 488 246 87 7 chr2 42921415 42921553 -207766301 - MIR SINE MIR -1 261 113 2042 173 3 0 chr2 42921572 42921902 -207765952 - MLT1A1 LTR MaLR -34 331 1 287 330 44 0 chr2 42921921 42922012 -207765842 - MIR SINE MIR -166 96 2 349 234 62 31 chr2 42923813 42923941 -207763913 - L1MC4a LINE L1 -1894 5914 5783 21 0 0 0 chr2 42923953 42923974 -207763880 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr2 42924131 42924174 -207763680 + AT_rich Low_complexity Low_complexity 1 43 0 370 346 19 38 chr2 42924266 42924477 -207763377 - HAL1b LINE L1 -477 871 665 288 337 83 37 chr2 42924552 42924852 -207763002 - HAL1b LINE L1 -782 566 253 180 0 0 0 chr2 42925181 42925201 -207762653 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1849 160 50 16 chr2 42925650 42926013 -207761841 + THE1C LTR MaLR 1 375 0 8328 144 12 37 chr2 42926015 42927441 -207760413 + THE1C-int LTR MaLR 3 1392 -188 434 70 0 56 chr2 42927441 42927512 -207760342 + THE1C-int LTR MaLR 1514 1580 0 1825 136 43 59 chr2 42927512 42927887 -207759967 + THE1C LTR MaLR 1 369 -6 349 285 133 19 chr2 42928482 42928745 -207759109 - L1M4 LINE L1 -1827 4319 4027 227 139 14 42 chr2 42930567 42930639 -207757215 + CT-rich Low_complexity Low_complexity 4 73 0 315 324 34 28 chr2 42934374 42934553 -207753301 - L2 LINE L2 -932 2382 2203 246 209 0 0 chr2 42935260 42935303 -207752551 - L2 LINE L2 -84 3229 3187 1109 188 32 28 chr2 42935996 42936214 -207751640 - MER20 DNA MER1_type 0 219 1 23 54 0 0 chr2 42936347 42936384 -207751470 + AT_rich Low_complexity Low_complexity 1 37 0 3113 147 59 4 chr2 42936923 42937447 -207750407 - MER41C LTR ERV1 0 554 2 211 137 68 0 chr2 42937672 42937745 -207750109 + (TA)n Simple_repeat Simple_repeat 2 79 0 369 190 20 0 chr2 42938342 42938442 -207749412 - L1MA8 LINE L1 -4 6287 6186 31 0 0 0 chr2 42940492 42940523 -207747331 + AT_rich Low_complexity Low_complexity 1 31 0 292 304 141 15 chr2 42940864 42940999 -207746855 + MIR SINE MIR 39 190 -72 3106 200 72 48 chr2 42941202 42942031 -207745823 + L1MD2 LINE L1 5273 6121 -238 331 303 0 0 chr2 42942635 42942724 -207745130 - L1MC4 LINE L1 -1339 6703 6615 257 244 35 0 chr2 42942735 42942821 -207745033 - L1MC4 LINE L1 -1339 6703 6615 246 277 0 11 chr2 42942737 42942831 -207745023 + L1MC4 LINE L1 6614 6706 -1336 * 1445 230 94 38 chr2 42944989 42945534 -207742320 - MLT1F1 LTR MaLR 0 567 5 216 135 0 0 chr2 42945587 42945624 -207742230 + (TA)n Simple_repeat Simple_repeat 1 37 0 1671 170 31 9 chr2 42945786 42946109 -207741745 + MER2 DNA MER2_type 2 331 -14 233 332 97 42 chr2 42946329 42946546 -207741308 + MLT1H LTR MaLR 107 335 -214 239 204 0 37 chr2 42946807 42946861 -207740993 + MIR SINE MIR 80 131 -131 647 241 0 6 chr2 42947262 42947420 -207740434 - L1PA15 LINE L1 -1 6164 6008 235 296 52 44 chr2 42947622 42947757 -207740097 - MLT1I LTR MaLR -168 241 106 780 202 65 65 chr2 42948354 42948616 -207739238 - MER63C DNA MER1_type 0 930 669 1689 206 37 124 chr2 42948617 42949287 -207738567 + LTR9 LTR ERV1 1 612 0 4811 182 43 25 chr2 42949287 42950935 -207736919 + HUERS-P3 LTR ERV1 1 1747 -5671 18534 188 48 26 chr2 42950953 42953817 -207734037 + HUERS-P3 LTR ERV1 2033 4970 -2597 2297 104 7 0 chr2 42953817 42954126 -207733728 - AluY SINE Alu 0 311 1 18534 188 48 26 chr2 42954126 42956194 -207731660 + HUERS-P3 LTR ERV1 4970 6991 -576 1040 117 11 17 chr2 42956178 42956363 -207731491 + HUERS-P3 LTR ERV1 3945 4128 -3688 * 1521 156 23 19 chr2 42956577 42956834 -207731020 + HUERS-P3 LTR ERV1 8659 8916 -3 1543 212 7 76 chr2 42956839 42957259 -207730595 + LTR9 LTR ERV1 1 391 -221 660 252 51 65 chr2 42957230 42957389 -207730465 + LTR9 LTR ERV1 323 478 -134 * 2209 107 0 0 chr2 42957389 42957678 -207730176 - AluY SINE Alu -19 292 4 660 252 51 65 chr2 42957678 42957812 -207730042 + LTR9 LTR ERV1 478 612 0 * 1708 150 111 171 chr2 42957812 42958524 -207729330 - MER63C DNA MER1_type -261 669 1 428 380 157 3 chr2 42958913 42959231 -207728623 - L3 LINE CR1 -353 1224 858 516 236 65 0 chr2 42959753 42959876 -207727978 - MIR SINE MIR -86 176 46 21 36 0 0 chr2 42961266 42961294 -207726560 + AT_rich Low_complexity Low_complexity 1 28 0 271 273 15 15 chr2 42961318 42961384 -207726470 - L2 LINE L2 -27 3245 3180 2431 63 7 0 chr2 42962660 42962961 -207724893 + AluY SINE Alu 1 303 -8 303 28 0 0 chr2 42964118 42964154 -207723700 + (CA)n Simple_repeat Simple_repeat 1 36 0 2098 127 10 3 chr2 43015145 43015453 -207672401 - AluSx SINE Alu -2 310 1 2142 138 0 0 chr2 43017059 43017356 -207670498 - AluSx SINE Alu -15 297 1 769 338 82 14 chr2 43017876 43018463 -207669391 - L2 LINE L2 -16 3297 2680 303 250 97 48 chr2 43019186 43019310 -207668544 - MIR SINE MIR -71 191 62 189 0 0 0 chr2 43019777 43019798 -207668056 + (T)n Simple_repeat Simple_repeat 1 21 0 357 364 59 17 chr2 43020357 43020475 -207667379 - L2 LINE L2 -2 3270 3148 226 234 0 0 chr2 43020757 43020804 -207667050 + (CTATT)n Simple_repeat Simple_repeat 3 49 0 2268 82 0 23 chr2 43021062 43021365 -207666489 + AluY SINE Alu 3 298 -13 1603 192 14 10 chr2 43021746 43022037 -207665817 + AluJo SINE Alu 1 292 -20 2059 134 0 22 chr2 43022226 43022540 -207665314 - AluSg SINE Alu -3 307 1 484 341 124 38 chr2 43022790 43023209 -207664645 + L2 LINE L2 2818 3272 0 307 351 20 14 chr2 43023639 43023787 -207664067 - MIR3 SINE MIR -12 196 48 265 182 64 47 chr2 43024226 43024328 -207663526 - MLT1G LTR MaLR -18 572 431 291 54 0 0 chr2 43024409 43024446 -207663408 + (TG)n Simple_repeat Simple_repeat 2 38 0 26 30 0 0 chr2 43025291 43025324 -207662530 + AT_rich Low_complexity Low_complexity 1 33 0 242 145 101 14 chr2 43025384 43025453 -207662401 - L1MA3 LINE L1 0 6305 6231 * 842 140 30 1 chr2 43025392 43025552 -207662302 + L1MA2 LINE L1 5835 5958 -203 373 208 0 0 chr2 43025557 43025629 -207662225 - MER94 DNA DNA -60 74 3 630 211 26 26 chr2 43027697 43027849 -207660005 + L1MB7 LINE L1 6016 6167 -17 10095 16 0 0 chr2 43028062 43030021 -207657833 - L1HS LINE L1 0 6155 4197 * 14598 24 0 0 chr2 43030017 43031759 -207656095 + L1HS LINE L1 2460 4201 -1945 10100 180 31 2 chr2 43031784 43033918 -207653936 - L1P5 LINE L1 -583 5573 3379 13088 212 56 4 chr2 43034014 43037603 -207650251 + L1 LINE L1 1524 5288 -858 2540 57 0 0 chr2 43037987 43038286 -207649568 + AluY SINE Alu 1 299 -12 1031 31 0 8 chr2 43038286 43038415 -207649439 + L1PB1 LINE L1 6022 6149 -2 398 264 64 18 chr2 43038415 43038525 -207649329 - MER5B DNA MER1_type -61 117 3 305 330 153 48 chr2 43040575 43040640 -207647214 + L2 LINE L2 1276 1333 -1981 2123 108 0 40 chr2 43040640 43040964 -207646890 - AluSx SINE Alu -1 311 1 305 330 153 48 chr2 43040964 43042075 -207645779 + L2 LINE L2 1333 2575 -739 336 384 24 76 chr2 43042235 43042524 -207645330 + L2 LINE L2 2997 3270 -2 1115 322 32 26 chr2 43043294 43043800 -207644054 - L2 LINE L2 0 3313 2805 249 308 95 80 chr2 43044718 43045235 -207642619 + L2 LINE L2 2301 2830 -484 2592 45 0 6 chr2 43045235 43045548 -207642306 - AluY SINE Alu 0 311 1 249 308 95 80 chr2 43045548 43045630 -207642224 + L2 LINE L2 2830 2909 -405 232 179 0 0 chr2 43045792 43045831 -207642023 - L2 LINE L2 -1 3312 3274 210 208 0 0 chr2 43047589 43047642 -207640212 + (CA)n Simple_repeat Simple_repeat 2 54 0 354 280 11 11 chr2 43048478 43048571 -207639283 + MIR SINE MIR 24 116 -92 566 318 28 37 chr2 43048571 43048788 -207639066 - MIR SINE MIR -1 261 47 572 217 7 35 chr2 43048836 43048979 -207638875 + L2 LINE L2 3170 3308 -5 969 322 93 16 chr2 43049328 43049834 -207638020 - L3 LINE CR1 -443 1134 590 695 290 46 8 chr2 43050501 43050760 -207637094 + LTR16C LTR ERVL 217 485 -6 268 325 0 0 chr2 43051963 43052043 -207635811 + MIR SINE MIR 64 143 -119 264 287 213 9 chr2 43052523 43052631 -207635223 + L2 LINE L2 3141 3270 -2 21 0 0 0 chr2 43052952 43052973 -207634881 + AT_rich Low_complexity Low_complexity 1 21 0 225 282 14 14 chr2 43054979 43055050 -207632804 + MIR3 SINE MIR 103 173 -35 1071 228 37 8 chr2 43055330 43055571 -207632283 + L1MCa LINE L1 4 251 -6175 2400 67 3 0 chr2 43056030 43056328 -207631526 - AluY SINE Alu -12 299 1 194 315 108 15 chr2 43056328 43056458 -207631396 + MIR SINE MIR 77 218 -44 232 350 181 19 chr2 43057086 43057246 -207630608 - L3 LINE CR1 -1 1576 1391 2294 107 0 3 chr2 43058394 43058703 -207629151 + AluSc SINE Alu 1 308 -1 550 286 0 0 chr2 43059206 43059318 -207628536 - L2 LINE L2 -1 3271 3160 15724 194 127 18 chr2 43060425 43064573 -207623281 + L1PA12 LINE L1 1029 6439 -1145 229 81 135 0 chr2 43064589 43064626 -207623228 + L1PA13 LINE L1 6119 6160 -3 23 33 0 0 chr2 43064626 43064656 -207623198 + AT_rich Low_complexity Low_complexity 1 30 0 432 348 69 20 chr2 43064968 43065215 -207622639 + MIR SINE MIR 3 261 -1 4502 155 35 9 chr2 43065439 43066256 -207621598 - L1PB4 LINE L1 -3 6153 5315 23 33 0 0 chr2 43066379 43066409 -207621445 + AT_rich Low_complexity Low_complexity 1 30 0 196 174 109 0 chr2 43066419 43066465 -207621389 + MER5B DNA MER1_type 106 156 -22 777 308 77 6 chr2 43068236 43068561 -207619293 + L1M2 LINE L1 103 450 -6399 1543 159 39 0 chr2 43068682 43069015 -207618839 + L1 LINE L1 3076 3421 -2725 1366 275 90 30 chr2 43069523 43070236 -207617618 + L1MC4 LINE L1 7122 7877 -165 287 161 0 16 chr2 43070248 43070310 -207617544 + GA-rich Low_complexity Low_complexity 1 61 0 194 261 197 58 chr2 43070418 43070606 -207617248 + L3b LINE CR1 1284 1497 -86 253 246 167 38 chr2 43072310 43072598 -207615256 - L1MC4a LINE L1 -1630 6178 5854 548 89 13 0 chr2 43074461 43074540 -207613314 - MADE1 DNA Mariner 0 80 1 207 176 0 0 chr2 43074566 43074600 -207613254 + MIR SINE MIR 159 192 -70 249 332 99 58 chr2 43076621 43076844 -207611010 + LTR67 LTR ERVL 43 274 -283 302 241 54 9 chr2 43076851 43076963 -207610891 - MER104 DNA Tc2 -63 117 1 240 272 88 8 chr2 43078894 43079019 -207608835 + L1ME4a LINE L1 5975 6109 -12 2747 154 68 6 chr2 43079328 43079875 -207607979 - L1MA7 LINE L1 0 6291 5711 319 280 125 36 chr2 43079875 43080043 -207607811 + MIR SINE MIR 66 248 -14 373 281 101 14 chr2 43080107 43080246 -207607608 - MIR SINE MIR -28 234 84 213 94 0 0 chr2 43080793 43080825 -207607029 + (TA)n Simple_repeat Simple_repeat 1 32 0 10780 37 12 1 chr2 43080827 43082926 -207604928 - L1PA5 LINE L1 -3 6151 4045 448 324 35 12 chr2 43083472 43083642 -207604212 + MIR3 SINE MIR 26 199 -9 292 317 129 32 chr2 43084263 43084604 -207603250 + LTR33 LTR ERVL 134 507 -14 1499 174 12 0 chr2 43084609 43084851 -207603003 + Tigger3(Golem) DNA MER2_type 2780 3024 -5 227 320 82 51 chr2 43086752 43087008 -207600846 + L2 LINE L2 1893 2156 -1158 594 385 82 11 chr2 43087866 43088230 -207599624 + MLT1K LTR MaLR 27 416 -172 21 0 0 0 chr2 43088912 43088933 -207598921 + AT_rich Low_complexity Low_complexity 1 21 0 2295 114 0 0 chr2 43089516 43089822 -207598032 + AluSg SINE Alu 1 306 -4 195 205 0 26 chr2 43090064 43090103 -207597751 - MIR SINE MIR -88 120 83 594 175 8 42 chr2 43090520 43090640 -207597214 - MER58A DNA MER1_type -8 216 101 1865 230 36 34 chr2 43090647 43091175 -207596679 - MER41B LTR ERV1 -12 597 114 504 274 0 0 chr2 43091175 43091277 -207596577 - MER58A DNA MER1_type -2 105 4 323 291 40 54 chr2 43091888 43092023 -207595831 - L2 LINE L2 0 3313 3179 207 0 0 0 chr2 43092023 43092046 -207595808 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 323 291 40 54 chr2 43092046 43092058 -207595796 - L2 LINE L2 -134 3179 3168 3180 285 45 41 chr2 43092112 43093388 -207594466 - L2 LINE L2 -289 3024 1728 196 253 89 25 chr2 43093763 43093842 -207594012 - L2 LINE L2 -4 3309 3226 24 0 0 0 chr2 43094649 43094673 -207593181 + AT_rich Low_complexity Low_complexity 1 24 0 210 258 142 33 chr2 43094847 43094967 -207592887 - L2 LINE L2 -2 3311 3179 35 0 0 0 chr2 43095016 43095051 -207592803 + AT_rich Low_complexity Low_complexity 1 35 0 216 182 0 0 chr2 43095246 43095290 -207592564 + CT-rich Low_complexity Low_complexity 2 45 0 213 39 0 0 chr2 43095290 43095316 -207592538 + (CA)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr2 43097763 43097785 -207590069 + AT_rich Low_complexity Low_complexity 1 22 0 212 366 125 36 chr2 43098271 43098911 -207588943 - L2 LINE L2 -654 2660 1964 431 247 74 107 chr2 43099091 43099362 -207588492 + MLT1I LTR MaLR 63 300 -109 279 176 0 153 chr2 43099342 43099473 -207588381 + MLT1I LTR MaLR 317 541 -8 * 3265 127 8 21 chr2 43101755 43102276 -207585578 + MER75 DNA T2_type 1 514 0 27 29 0 0 chr2 43102479 43102513 -207585341 + AT_rich Low_complexity Low_complexity 1 34 0 272 284 147 18 chr2 43102884 43102993 -207584861 + L2 LINE L2 3142 3264 -8 2320 113 0 0 chr2 43103067 43103376 -207584478 - AluSx SINE Alu -3 309 1 1600 209 94 92 chr2 43103724 43104122 -207583732 - MLT1F1 LTR MaLR 0 567 141 2256 114 3 3 chr2 43104122 43104430 -207583424 + AluSx SINE Alu 3 310 -2 1600 209 94 92 chr2 43104430 43104562 -207583292 - MLT1F1 LTR MaLR -426 141 11 204 412 20 0 chr2 43105118 43105220 -207582634 + MER5A DNA MER1_type 13 116 -73 2016 181 31 28 chr2 43105897 43106452 -207581402 + MLT2A2 LTR ERVL 1 554 0 524 343 54 57 chr2 43106786 43107555 -207580299 - L2 LINE L2 -6 3307 2364 2178 157 98 3 chr2 43109525 43109914 -207577940 + MSTB LTR MaLR 1 426 0 281 235 59 12 chr2 43110338 43110423 -207577431 + MER5B DNA MER1_type 90 178 0 303 190 25 51 chr2 43110436 43110515 -207577339 + L1MC1 LINE L1 5194 5270 -876 4982 142 32 78 chr2 43110536 43111561 -207576293 + L1MC1 LINE L1 5356 6333 0 316 177 269 77 chr2 43111588 43111718 -207576136 + MER5A DNA MER1_type 9 163 -26 658 243 35 18 chr2 43112000 43112169 -207575685 + MER97c DNA MER1_type? 8 179 -911 180 327 220 31 chr2 43112630 43112789 -207575065 + MER5A DNA MER1_type 1 189 0 303 28 0 0 chr2 43113064 43113100 -207574754 + (CA)n Simple_repeat Simple_repeat 1 36 0 326 326 10 0 chr2 43113533 43113631 -207574223 + MIR3 SINE MIR 108 206 -2 362 96 84 12 chr2 43114044 43114127 -207573727 + L1MB4 LINE L1 6086 6174 -6 10442 212 36 53 chr2 43114877 43116589 -207571265 + L1P LINE L1 3 1640 -4506 2255 110 3 0 chr2 43116589 43116889 -207570965 + AluSx SINE Alu 1 301 -11 10442 212 36 53 chr2 43116889 43118213 -207569641 + L1P LINE L1 1640 2986 -3160 4867 49 0 0 chr2 43119088 43119680 -207568174 + L1PA4 LINE L1 5560 6151 -4 223 366 0 12 chr2 43120202 43120284 -207567570 + L2 LINE L2 3184 3264 -8 732 189 8 0 chr2 43120452 43120579 -207567275 + Tigger7 DNA MER2_type 2360 2487 0 24 53 0 0 chr2 43121164 43121202 -207566652 + AT_rich Low_complexity Low_complexity 1 38 0 1405 171 97 40 chr2 43122301 43122622 -207565232 + MER44D DNA MER2_type 1 609 0 25 0 0 0 chr2 43123475 43123500 -207564354 + AT_rich Low_complexity Low_complexity 1 25 0 181 198 23 23 chr2 43124093 43124179 -207563675 + (CATATA)n Simple_repeat Simple_repeat 3 88 0 735 293 34 37 chr2 43125094 43125391 -207562463 + MLT1J LTR MaLR 216 511 0 1217 217 38 61 chr2 43126563 43126955 -207560899 - MLT2C1 LTR ERVL -2 395 13 243 390 21 0 chr2 43127750 43127845 -207560009 + MIR3 SINE MIR 73 169 -39 221 269 19 0 chr2 43127965 43128032 -207559822 + GA-rich Low_complexity Low_complexity 4 110 0 827 251 62 13 chr2 43128087 43128314 -207559540 - Charlie8 DNA MER1_type -2141 276 39 821 119 33 0 chr2 43128328 43128479 -207559375 + MER96B DNA MER1_type? 23 178 -239 238 272 155 60 chr2 43128740 43128972 -207558882 - MIR SINE MIR -3 259 6 190 320 107 25 chr2 43129832 43129954 -207557900 + L2 LINE L2 3179 3310 -3 2244 109 13 0 chr2 43131832 43132135 -207555719 - AluSx SINE Alu -5 307 1 27 49 0 0 chr2 43132528 43132569 -207555285 + AT_rich Low_complexity Low_complexity 1 41 0 198 167 0 0 chr2 43133188 43133224 -207554630 + (ATG)n Simple_repeat Simple_repeat 2 37 0 1383 70 5 0 chr2 43133270 43133455 -207554399 - L1PB1 LINE L1 0 6151 5966 385 241 36 27 chr2 43133800 43133912 -207553942 + MIR3 SINE MIR 89 201 -7 1874 149 187 15 chr2 43134503 43134878 -207552976 + MSTB LTR MaLR 6 425 -1 371 211 49 84 chr2 43135428 43135570 -207552284 - MLT1J LTR MaLR -372 139 3 23 0 0 0 chr2 43136048 43136071 -207551783 + AT_rich Low_complexity Low_complexity 1 23 0 2016 160 68 27 chr2 43136210 43136648 -207551206 + MSTB2 LTR MaLR 1 456 -1 28 48 0 0 chr2 43136693 43136735 -207551119 + AT_rich Low_complexity Low_complexity 1 42 0 23 54 0 0 chr2 43136766 43136803 -207551051 + AT_rich Low_complexity Low_complexity 1 37 0 2114 126 0 16 chr2 43137147 43137464 -207550390 - AluSx SINE Alu 0 312 1 444 90 22 75 chr2 43137934 43138068 -207549786 + (GGAAA)n Simple_repeat Simple_repeat 4 130 0 244 262 84 0 chr2 43138085 43138192 -207549662 + L1MEd LINE L1 87 202 -5917 2571 43 0 3 chr2 43138683 43138983 -207548871 - AluY SINE Alu -12 299 1 21 36 0 0 chr2 43139057 43139085 -207548769 + AT_rich Low_complexity Low_complexity 1 28 0 570 292 35 67 chr2 43140015 43140330 -207547524 - L2 LINE L2 0 3313 3009 311 333 54 0 chr2 43140652 43140763 -207547091 - L2 LINE L2 -7 3306 3190 913 274 0 5 chr2 43140794 43141009 -207546845 - MIR SINE MIR -26 236 23 25 51 0 0 chr2 43141484 43141523 -207546331 + AT_rich Low_complexity Low_complexity 1 39 0 183 279 157 76 chr2 43142563 43142735 -207545119 + MIR SINE MIR 9 194 -68 1744 193 25 50 chr2 43143455 43143778 -207544076 - MSTD LTR MaLR -6 390 77 2215 99 7 0 chr2 43143778 43144071 -207543783 + AluSg SINE Alu 1 295 -15 1744 193 25 50 chr2 43144071 43144147 -207543707 - MSTD LTR MaLR -319 77 1 1281 199 75 126 chr2 43144188 43144251 -207543603 - MLT1D LTR MaLR 0 505 440 410 35 0 0 chr2 43144251 43144308 -207543546 + L1MA7 LINE L1 6235 6291 0 1281 199 75 126 chr2 43144308 43144456 -207543398 - MLT1D LTR MaLR -65 440 286 2467 63 0 0 chr2 43144456 43144759 -207543095 + AluY SINE Alu 1 303 -8 1281 199 75 126 chr2 43144759 43145078 -207542776 - MLT1D LTR MaLR -219 286 1 415 321 43 22 chr2 43145108 43145292 -207542562 + L2 LINE L2 2634 2821 -493 2023 135 3 7 chr2 43145306 43145610 -207542244 - AluSq SINE Alu -10 303 1 277 272 153 61 chr2 43145613 43145841 -207542013 + MER112 DNA MER1_type 12 260 0 406 313 180 39 chr2 43145841 43146247 -207541607 + L2 LINE L2 2851 3313 0 23 54 0 0 chr2 43146310 43146347 -207541507 + AT_rich Low_complexity Low_complexity 1 37 0 396 323 126 6 chr2 43146361 43146528 -207541326 - MIR SINE MIR -2 260 74 * 410 262 77 28 chr2 43146526 43146726 -207541128 - MIR SINE MIR 0 262 16 206 256 81 0 chr2 43146736 43146822 -207541032 + MER5A DNA MER1_type 4 96 -93 1644 267 63 70 chr2 43146917 43147476 -207540378 - HAL1b LINE L1 -186 1162 613 2127 122 0 3 chr2 43147476 43147770 -207540084 - AluSg SINE Alu -15 295 3 1644 267 63 70 chr2 43147770 43148327 -207539527 - HAL1b LINE L1 -735 613 54 646 335 38 8 chr2 43149315 43149554 -207538300 + MIR SINE MIR 17 262 0 1693 200 32 22 chr2 43149559 43149929 -207537925 - MLT1A2 LTR MaLR 0 374 1 859 288 102 11 chr2 43150124 43150409 -207537445 - L2 LINE L2 0 3313 3003 251 341 188 5 chr2 43150465 43150673 -207537181 - L2 LINE L2 -407 2907 2662 485 294 87 26 chr2 43151273 43151504 -207536350 + MIR SINE MIR 12 256 -6 232 280 119 36 chr2 43151747 43151915 -207535939 - L2 LINE L2 -832 2482 2301 355 305 165 47 chr2 43152020 43152299 -207535555 - L2 LINE L2 -343 2971 2660 228 315 16 39 chr2 43152312 43152439 -207535415 + L1MEd LINE L1 27 150 -5969 2295 175 56 123 chr2 43152594 43153610 -207534244 - L1MA10 LINE L1 -603 5694 4744 3048 148 46 28 chr2 43153612 43154226 -207533628 + L1MA10 LINE L1 5710 6334 0 1913 146 3 3 chr2 43154309 43154604 -207533250 + AluSc SINE Alu 5 299 -10 465 242 104 43 chr2 43154669 43154995 -207532859 - LTR37B LTR ERV1 -9 459 114 * 647 161 24 24 chr2 43154992 43155116 -207532738 - MER3 DNA MER1_type -76 133 10 2563 49 3 0 chr2 43155145 43155452 -207532402 + AluY SINE Alu 1 308 -3 2422 91 0 0 chr2 43155476 43155785 -207532069 - AluSg SINE Alu -1 309 1 457 133 29 105 chr2 43155785 43155890 -207531964 - LTR37B LTR ERV1 -371 97 1 281 260 87 29 chr2 43155964 43156068 -207531786 + L1MEd LINE L1 498 607 -5512 314 363 59 0 chr2 43156546 43156681 -207531173 + MIR SINE MIR 49 191 -71 1788 157 28 0 chr2 43156691 43157010 -207530844 + L1MA5 LINE L1 5973 6300 0 358 321 38 13 chr2 43157154 43157313 -207530541 - L1M4 LINE L1 -3313 4252 4090 253 300 93 52 chr2 43157432 43157852 -207530002 - L1M4 LINE L1 -3600 3965 3529 1784 155 0 35 chr2 43158021 43158331 -207529523 - AluJb SINE Alu -11 301 3 566 310 78 35 chr2 43158406 43159043 -207528811 - L1ME3A LINE L1 -241 5929 5254 474 276 62 26 chr2 43159328 43159668 -207528186 - L1ME3A LINE L1 -1524 4622 4271 6247 174 27 4 chr2 43159676 43161514 -207526340 - L1MC1 LINE L1 -20 6296 4413 420 268 71 6 chr2 43161529 43161712 -207526142 - L1MC1 LINE L1 -2154 3975 3781 1437 146 8 20 chr2 43162072 43162318 -207525536 - AluSg/x SINE Alu -3 307 65 1984 140 0 59 chr2 43162395 43162751 -207525103 + MER1B DNA MER1_type 1 335 -2 227 324 50 11 chr2 43162959 43163138 -207524716 - L1M4 LINE L1 -4564 3001 2816 22 35 0 0 chr2 43163250 43163279 -207524575 + AT_rich Low_complexity Low_complexity 1 29 0 1768 168 0 14 chr2 43163344 43163641 -207524213 + AluSx SINE Alu 3 295 -17 424 272 43 47 chr2 43163656 43163891 -207523963 - L1MC1 LINE L1 -4990 1129 896 234 0 0 0 chr2 43164548 43164574 -207523280 + (TG)n Simple_repeat Simple_repeat 2 27 0 597 294 44 66 chr2 43166326 43166564 -207521290 - MARNA DNA Mariner -52 534 292 2116 84 0 0 chr2 43166564 43166837 -207521017 + AluY SINE Alu 35 307 -4 597 294 44 66 chr2 43166837 43167095 -207520759 - MARNA DNA Mariner -294 292 49 1252 171 44 0 chr2 43167535 43167786 -207520068 - L1MA9 LINE L1 0 6312 6051 220 222 28 0 chr2 43168136 43168208 -207519646 + (TA)n Simple_repeat Simple_repeat 2 75 0 240 86 0 0 chr2 43168249 43168284 -207519570 + (TG)n Simple_repeat Simple_repeat 2 36 0 613 201 178 67 chr2 43169656 43170043 -207517811 + MLT1E2 LTR MaLR 90 563 -61 189 252 92 84 chr2 43170063 43170182 -207517672 - MIR SINE MIR -139 123 4 596 275 29 74 chr2 43170540 43170784 -207517070 + MIR SINE MIR 8 240 -22 398 107 48 19 chr2 43170865 43170968 -207516886 + (TA)n Simple_repeat Simple_repeat 2 107 0 401 261 58 36 chr2 43171057 43171195 -207516659 - MER5A DNA MER1_type 0 189 49 310 340 39 26 chr2 43171059 43171212 -207516642 + MER5A DNA MER1_type 17 171 -18 * 256 200 0 0 chr2 43171759 43171809 -207516045 + MER69 DNA AcHobo 86 135 -2391 234 326 23 23 chr2 43173021 43173107 -207514747 - L2 LINE L2 -53 3219 3134 245 314 70 22 chr2 43173174 43173332 -207514522 + MIR SINE MIR 20 182 -66 326 290 121 45 chr2 43173956 43174512 -207513342 + L2 LINE L2 2626 3224 -89 2085 115 4 0 chr2 43174727 43175005 -207512849 - AluSg SINE Alu -31 279 1 275 406 57 11 chr2 43175178 43175461 -207512393 - L2 LINE L2 -620 2694 2399 320 273 61 30 chr2 43176409 43176508 -207511346 - MIR SINE MIR -70 138 37 388 350 32 38 chr2 43178111 43178425 -207509429 + L2 LINE L2 2162 2473 -841 3854 185 48 5 chr2 43178630 43179586 -207508268 + L1MD2 LINE L1 5133 6129 -230 909 126 0 30 chr2 43179588 43179723 -207508131 + FLAM_C SINE Alu 3 133 -10 563 294 13 35 chr2 43179733 43179961 -207507893 + L1MD2 LINE L1 6119 6341 -18 2365 153 45 41 chr2 43180451 43180916 -207506938 - MLT1C LTR MaLR 0 467 1 2667 148 18 11 chr2 43181429 43181883 -207505971 - LTR32 LTR ERVL 0 471 15 2047 75 14 3 chr2 43182709 43183002 -207504852 + L1PA14 LINE L1 5865 6160 -1 231 349 36 12 chr2 43184088 43184171 -207503683 - L2 LINE L2 -5 3267 3183 207 0 0 0 chr2 43185161 43185184 -207502670 + (CAT)n Simple_repeat Simple_repeat 1 23 0 650 268 105 5 chr2 43185184 43185393 -207502461 - MIR SINE MIR -8 254 25 1678 182 67 21 chr2 43185813 43186186 -207501668 - MLT1B LTR MaLR 0 390 1 5774 110 80 0 chr2 43186754 43187732 -207500122 - L1PA14 LINE L1 -2 6159 5162 285 330 15 64 chr2 43188551 43188719 -207499135 - MER91 DNA MER1_type 0 190 41 285 51 0 0 chr2 43188782 43188821 -207499033 + (CA)n Simple_repeat Simple_repeat 1 39 0 581 263 122 5 chr2 43189061 43189274 -207498580 + Charlie1 DNA MER1_type 1 238 -2523 * 663 191 7 0 chr2 43189257 43189398 -207498456 + Charlie1 DNA MER1_type 2620 2761 0 338 281 49 0 chr2 43189526 43189608 -207498246 + MIR SINE MIR 29 114 -148 185 294 150 31 chr2 43190299 43190459 -207497395 - L3 LINE CR1 -27 1550 1372 285 93 0 0 chr2 43190881 43190935 -207496919 - Charlie5 DNA MER1_type -87 2525 2472 21 89 0 0 chr2 43191209 43191265 -207496589 + AT_rich Low_complexity Low_complexity 1 56 0 2071 109 3 3 chr2 43192269 43192583 -207495271 + AluSq SINE Alu 1 314 0 990 197 133 0 chr2 43192811 43193090 -207494764 + MER33 DNA MER1_type 4 319 -5 23 0 0 0 chr2 43193320 43193343 -207494511 + AT_rich Low_complexity Low_complexity 1 23 0 2671 36 0 0 chr2 43193511 43193816 -207494038 + AluYa5 SINE Alu 1 305 -6 194 281 35 0 chr2 43194223 43194280 -207493574 - L2 LINE L2 0 3313 3255 518 277 92 62 chr2 43194374 43194904 -207492950 - L2 LINE L2 -64 3249 2701 1633 149 16 0 chr2 43195018 43195260 -207492594 + AluJo SINE Alu 1 246 -66 399 309 91 19 chr2 43195453 43195663 -207492191 - MIR SINE MIR -14 248 24 26 30 0 0 chr2 43196330 43196363 -207491491 + AT_rich Low_complexity Low_complexity 1 33 0 304 223 78 10 chr2 43196967 43197070 -207490784 - MLT1J2 LTR MaLR -340 110 1 1838 175 3 0 chr2 43197318 43197615 -207490239 + AluJb SINE Alu 1 298 -14 224 370 66 28 chr2 43198023 43198204 -207489650 + L3 LINE CR1 1377 1564 -13 26 62 0 15 chr2 43199499 43199525 -207488329 + AT_rich Low_complexity Low_complexity 1 26 -38 2080 136 0 0 chr2 43199525 43199820 -207488034 + AluSx SINE Alu 5 299 -13 26 62 0 15 chr2 43199820 43199858 -207487996 + AT_rich Low_complexity Low_complexity 26 64 0 245 250 47 0 chr2 43200065 43200129 -207487725 + MLT1L LTR MaLR 2 68 -547 24 0 0 0 chr2 43200218 43200242 -207487612 + AT_rich Low_complexity Low_complexity 1 24 0 210 266 0 31 chr2 43200261 43200325 -207487529 + GA-rich Low_complexity Low_complexity 4 65 0 189 314 100 0 chr2 43200345 43200415 -207487439 + MIR SINE MIR 34 110 -98 334 328 109 29 chr2 43200447 43200621 -207487233 - MIR SINE MIR -51 211 24 191 264 111 0 chr2 43200672 43200744 -207487110 + MIR SINE MIR 105 184 -78 1194 246 120 5 chr2 43200825 43201216 -207486638 - MLT1H LTR MaLR -113 436 1 742 203 17 23 chr2 43201904 43202081 -207485773 + MER5B DNA MER1_type 1 176 -2 482 271 124 49 chr2 43202219 43202444 -207485410 + MIR SINE MIR 8 249 -13 389 208 179 98 chr2 43203157 43203229 -207484625 + L2 LINE L2 3127 3192 -121 981 210 36 18 chr2 43203229 43203448 -207484406 + MER58A DNA MER1_type 2 224 0 389 208 179 98 chr2 43203448 43203548 -207484306 + L2 LINE L2 3192 3313 0 345 271 10 0 chr2 43203649 43203745 -207484109 - MIR3 SINE MIR -23 185 89 232 306 45 45 chr2 43204455 43204589 -207483265 - L2 LINE L2 -1 3312 3179 261 0 0 0 chr2 43204963 43204992 -207482862 + (A)n Simple_repeat Simple_repeat 1 29 0 502 301 164 11 chr2 43205028 43205211 -207482643 - L3 LINE CR1 -28 1549 1339 258 271 60 126 chr2 43205874 43206025 -207481829 + L3 LINE CR1 4 144 -1433 604 196 196 22 chr2 43206248 43206427 -207481427 - MIR SINE MIR -22 240 31 335 208 52 0 chr2 43207094 43207171 -207480683 + MER112 DNA MER1_type 6 86 -174 225 0 0 0 chr2 43207577 43207602 -207480252 + (CA)n Simple_repeat Simple_repeat 2 26 0 209 271 0 0 chr2 43208533 43208581 -207479273 + GA-rich Low_complexity Low_complexity 2 49 0 804 193 0 0 chr2 43208816 43208961 -207478893 + MER3 DNA MER1_type 2 146 -63 201 316 239 0 chr2 43208980 43209097 -207478757 - MIR3 SINE MIR -52 156 12 216 91 45 23 chr2 43209222 43209266 -207478588 + T-rich Low_complexity Low_complexity 3 47 0 237 279 98 68 chr2 43209489 43209715 -207478139 + MIR SINE MIR 20 252 -10 315 302 216 0 chr2 43210488 43210604 -207477250 - MIR3 SINE MIR -9 199 59 291 344 11 0 chr2 43210617 43210707 -207477147 + MER81 DNA DNA 1 91 -23 468 182 57 0 chr2 43210717 43210805 -207477049 + MER81 DNA DNA 22 114 0 291 338 50 12 chr2 43211567 43211727 -207476127 - MIR SINE MIR -36 226 61 261 0 0 0 chr2 43215553 43215582 -207472272 + (A)n Simple_repeat Simple_repeat 1 29 0 403 271 47 18 chr2 43216188 43216358 -207471496 - MER104 DNA MER2_type -1 179 5 372 353 37 0 chr2 43216422 43216558 -207471296 + MLT1I LTR MaLR 81 221 -188 1632 115 138 15 chr2 43216678 43216938 -207470916 - AluSx SINE Alu -20 292 1 686 189 23 0 chr2 43216990 43217122 -207470732 + AluJo SINE Alu 2 136 -176 328 206 0 41 chr2 43217126 43217199 -207470655 + MLT1I LTR MaLR 336 405 -4 4635 22 0 0 chr2 43217300 43217833 -207470021 - L1P LINE L1 -1634 4512 3980 7253 43 6 1 chr2 43217833 43219126 -207468728 + L1PA4 LINE L1 4863 6136 -19 221 323 21 54 chr2 43219126 43219219 -207468635 - MIR SINE MIR -81 127 38 1837 134 0 4 chr2 43219423 43219684 -207468170 + AluSq SINE Alu 1 260 -53 5415 161 21 24 chr2 43221830 43222072 -207465782 + L1PB3 LINE L1 4808 5049 -1105 1785 159 85 23 chr2 43222072 43222425 -207465429 + THE1C LTR MaLR 1 375 0 5415 161 21 24 chr2 43222425 43222784 -207465070 + L1PB3 LINE L1 5049 5407 -747 2138 109 46 60 chr2 43222784 43223151 -207464703 + THE1B LTR MaLR 1 362 -2 5415 161 21 24 chr2 43223151 43223902 -207463952 + L1PB3 LINE L1 5407 6147 -7 29 0 0 0 chr2 43223902 43223931 -207463923 + AT_rich Low_complexity Low_complexity 1 29 0 665 50 0 20 chr2 43224070 43224169 -207463685 + (TCTCCC)n Simple_repeat Simple_repeat 1 97 0 7008 63 18 55 chr2 43224169 43226749 -207461105 + SVA Other Other 57 1386 0 432 301 157 0 chr2 43226946 43227099 -207460755 - MLT1J2 LTR MaLR -267 183 7 270 159 143 16 chr2 43227286 43227349 -207460505 + MER103 DNA DNA 13 83 -83 1262 128 25 0 chr2 43227546 43227742 -207460112 + L1PB4 LINE L1 5766 5966 -190 273 331 0 0 chr2 43228308 43228429 -207459425 + (CATATA)n Simple_repeat Simple_repeat 6 126 0 350 214 48 0 chr2 43228430 43228514 -207459340 + L1MC4 LINE L1 6613 6700 -1342 498 245 0 42 chr2 43228515 43228804 -207459050 + (CATATA)n Simple_repeat Simple_repeat 1 276 0 392 292 49 7 chr2 43228995 43229139 -207458715 - L2 LINE L2 0 3313 3164 1306 257 85 19 chr2 43229747 43230384 -207457470 - L1ME3A LINE L1 -344 5826 5151 1309 215 116 53 chr2 43230487 43231123 -207456731 - L1MC5 LINE L1 -26 7935 7260 1050 206 60 108 chr2 43231283 43231748 -207456106 - L1MC5 LINE L1 -746 7215 6773 643 181 57 105 chr2 43231751 43231961 -207455893 + LTR16A1 LTR ERVL 4 203 -254 270 0 0 0 chr2 43232083 43232113 -207455741 + (CA)n Simple_repeat Simple_repeat 2 31 0 532 289 13 0 chr2 43232118 43232277 -207455577 + LTR16A1 LTR ERVL 297 457 0 2435 77 0 3 chr2 43232487 43232784 -207455070 - AluY SINE Alu -15 296 1 2113 113 0 21 chr2 43232784 43233075 -207454779 - AluSx SINE Alu -5 307 23 280 244 222 0 chr2 43233850 43233940 -207453914 + L2 LINE L2 3200 3309 -4 1590 245 43 19 chr2 43234284 43234700 -207453154 + L1MCb LINE L1 3 428 -5617 * 6515 151 52 103 chr2 43234698 43234950 -207452904 + L1MC3 LINE L1 6102 6365 -1420 3000 119 117 0 chr2 43234950 43235419 -207452435 - MER1A DNA MER1_type 0 527 4 6515 151 52 103 chr2 43235419 43235671 -207452183 + L1MC3 LINE L1 6365 6628 -1157 441 73 0 0 chr2 43235671 43235726 -207452128 - Charlie3 DNA MER1_type -4 2706 2652 6515 151 52 103 chr2 43235726 43236813 -207451041 + L1MC3 LINE L1 6628 7663 -122 1098 100 13 0 chr2 43236813 43236963 -207450891 - THE1B LTR MaLR 0 364 213 462 113 188 0 chr2 43236950 43237030 -207450824 - THE1B LTR MaLR -268 96 2 * 515 171 103 17 chr2 43237031 43237148 -207450706 + L1MC3 LINE L1 7659 7785 0 349 343 61 24 chr2 43237714 43237927 -207449927 - MLT1K LTR MaLR -358 230 10 302 296 35 9 chr2 43238320 43238435 -207449419 + MIR3 SINE MIR 43 160 -48 283 266 62 53 chr2 43238591 43238704 -207449150 + L2 LINE L2 3158 3271 -1 2382 127 85 10 chr2 43239409 43239811 -207448043 + MSTB1 LTR MaLR 1 432 0 491 274 14 55 chr2 43240311 43240479 -207447375 - MIR SINE MIR -54 208 50 311 272 88 18 chr2 43241877 43241991 -207445863 - MIR SINE MIR -78 184 63 * 3656 260 117 21 chr2 43241968 43243379 -207444475 - L2 LINE L2 -475 2839 1293 1986 165 0 19 chr2 43243822 43244138 -207443716 + AluSg SINE Alu 1 310 0 245 200 0 0 chr2 43244721 43244766 -207443088 - MLT1E LTR MaLR 0 567 523 2254 125 3 0 chr2 43244794 43245106 -207442748 + AluSq SINE Alu 1 313 0 1463 181 70 0 chr2 43245117 43245376 -207442478 - AluJo SINE Alu -30 282 6 1331 241 88 60 chr2 43245383 43245460 -207442394 - MLT1E LTR MaLR -37 556 483 1867 146 4 0 chr2 43245460 43245765 -207442089 - AluSg SINE Alu 0 306 1 1331 241 88 60 chr2 43245765 43246221 -207441633 - MLT1E LTR MaLR -110 483 7 294 281 112 15 chr2 43248042 43248238 -207439616 + L2 LINE L2 1795 2009 -1305 1725 61 61 0 chr2 43249702 43249930 -207437924 + L1PA5 LINE L1 5911 6152 -2 415 256 60 36 chr2 43251153 43251250 -207436604 + MIR SINE MIR 72 176 -86 1165 219 0 0 chr2 43251250 43251469 -207436385 - MER20 DNA MER1_type 0 219 1 415 256 60 36 chr2 43251469 43251539 -207436315 + MIR SINE MIR 176 243 -19 925 309 46 59 chr2 43252043 43252754 -207435100 - L3 LINE CR1 -163 1414 713 831 212 42 60 chr2 43252837 43252973 -207434881 + MER58A DNA MER1_type 10 142 -2278 2341 116 3 0 chr2 43252973 43253283 -207434571 + AluSp SINE Alu 1 311 -2 831 212 42 60 chr2 43253283 43253363 -207434491 + MER58A DNA MER1_type 142 222 -2 2260 172 16 35 chr2 43254192 43254623 -207433231 + MSTB LTR MaLR 1 423 -3 430 284 55 0 chr2 43254777 43254904 -207432950 + MIR SINE MIR 119 252 -10 500 226 36 36 chr2 43255254 43255422 -207432432 - MLT1J LTR MaLR -16 495 328 676 191 38 8 chr2 43255430 43255561 -207432293 + MER5A DNA MER1_type 21 155 -34 257 311 83 83 chr2 43255596 43255873 -207431981 - MLT1J LTR MaLR -234 277 1 739 229 33 38 chr2 43256869 43257109 -207430745 - MIR SINE MIR -16 246 8 23 33 0 0 chr2 43257255 43257285 -207430569 + AT_rich Low_complexity Low_complexity 1 30 0 1296 184 105 113 chr2 43257581 43258096 -207429758 - MER67D LTR ERV1 -1 513 3 1147 277 74 32 chr2 43258820 43259185 -207428669 + LTR26 LTR ERV1 55 440 -163 1864 134 22 0 chr2 43259185 43259453 -207428401 + AluSx SINE Alu 30 303 -9 1147 277 74 32 chr2 43259453 43259491 -207428363 + LTR26 LTR ERV1 440 475 -128 782 340 75 62 chr2 43259830 43261005 -207426849 + PABL_B-int LTR ERV1 2654 3843 -3279 210 292 0 56 chr2 43261304 43261393 -207426461 - MIR3 SINE MIR -3 205 122 368 232 30 30 chr2 43261780 43261879 -207425975 + L1MC5 LINE L1 7828 7926 -35 1946 161 3 0 chr2 43262026 43262325 -207425529 + AluJo SINE Alu 6 305 -7 508 273 25 0 chr2 43262344 43262465 -207425389 + MER5B DNA MER1_type 53 176 -2 198 0 0 0 chr2 43263226 43263248 -207424606 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 438 292 89 12 chr2 43263311 43263479 -207424375 - MIR3 SINE MIR -24 184 4 307 235 156 84 chr2 43264326 43264505 -207423349 + L2 LINE L2 3122 3313 0 248 250 18 0 chr2 43265081 43265137 -207422717 + GA-rich Low_complexity Low_complexity 5 61 0 3704 30 0 101 chr2 43265474 43266009 -207421845 + L1PA4 LINE L1 5675 6155 0 186 366 12 0 chr2 43266271 43266353 -207421501 - MIR SINE MIR 0 262 180 579 161 195 0 chr2 43266353 43266471 -207421383 + MLT1J LTR MaLR 1 141 -370 273 297 23 86 chr2 43267070 43267198 -207420656 - MIR SINE MIR -96 166 47 212 240 0 20 chr2 43267600 43267650 -207420204 + MIR SINE MIR 69 117 -91 436 298 86 41 chr2 43268585 43268830 -207419024 - MIR SINE MIR -6 256 1 276 296 17 81 chr2 43268919 43269091 -207418763 + MLT1L LTR MaLR 1 161 -454 206 207 35 17 chr2 43269196 43269254 -207418600 + CT-rich Low_complexity Low_complexity 2 60 0 441 293 24 6 chr2 43269368 43269535 -207418319 + MLT1L LTR MaLR 444 613 -2 2026 156 25 3 chr2 43269645 43270003 -207417851 - MER47A DNA MER2_type 0 366 1 677 205 0 0 chr2 43270927 43271039 -207416815 - MER81 DNA DNA 0 114 3 1104 224 5 0 chr2 43271941 43272155 -207415699 + MER20B DNA MER1_type 1 215 -4 1709 162 0 11 chr2 43272418 43272690 -207415164 - AluJb SINE Alu 0 312 44 332 91 0 0 chr2 43272841 43272885 -207414969 + U6 snRNA snRNA 1 44 -63 21 57 0 0 chr2 43272962 43272997 -207414857 + AT_rich Low_complexity Low_complexity 1 35 0 4367 171 70 66 chr2 43273829 43275043 -207412811 - L1MC2 LINE L1 -14 6748 5551 1671 194 3 10 chr2 43275043 43275353 -207412501 + AluSx SINE Alu 1 308 -4 4367 171 70 66 chr2 43275353 43275715 -207412139 - L1MC2 LINE L1 -1211 5551 5192 955 157 34 60 chr2 43275722 43275957 -207411897 + MER46A DNA MER2_type 8 236 0 8063 229 50 14 chr2 43275957 43276455 -207411399 - L1MC2 LINE L1 -1371 5193 4714 2425 83 0 0 chr2 43276455 43276756 -207411098 - AluY SINE Alu -10 301 1 8063 229 50 14 chr2 43276756 43277047 -207410807 - L1MC2 LINE L1 -1850 4714 4435 1854 163 49 69 chr2 43277047 43277513 -207410341 - MSTB2 LTR MaLR 0 457 1 8063 229 50 14 chr2 43277513 43277731 -207410123 - L1MC2 LINE L1 -2129 4435 4226 7854 130 19 9 chr2 43277731 43279016 -207408838 + HSMAR2 DNA Mariner 4 1301 -1 8063 229 50 14 chr2 43279016 43280893 -207406961 - L1MC2 LINE L1 -2338 4226 2203 2693 194 78 79 chr2 43280916 43282219 -207405635 - L1MC2 LINE L1 -4850 1195 1 6050 92 42 0 chr2 43283178 43284680 -207403174 + L1PA11 LINE L1 4623 6166 -8 1650 272 52 14 chr2 43285334 43285830 -207402024 + MLT2E LTR ERVL 1 515 -113 902 225 45 0 chr2 43285887 43286087 -207401767 - MER63A DNA MER1_type -1 209 1 917 79 36 0 chr2 43286346 43286485 -207401369 + L1MA2 LINE L1 5806 5949 -355 226 316 152 32 chr2 43286515 43286765 -207401089 + HAL1b LINE L1 366 645 -703 387 0 0 0 chr2 43287073 43287116 -207400738 + (TG)n Simple_repeat Simple_repeat 2 44 0 1016 145 0 0 chr2 43287121 43287266 -207400588 - AluSq SINE Alu -35 278 134 1099 288 35 44 chr2 43287375 43287827 -207400027 - LTR16A1 LTR ERVL 0 457 10 237 305 0 0 chr2 43287910 43287992 -207399862 + L1MA10 LINE L1 4765 4846 -1300 308 210 0 0 chr2 43287993 43288055 -207399799 - L1MC4 LINE L1 -1339 6703 6642 5186 175 30 8 chr2 43288060 43289509 -207398345 + L1MA10 LINE L1 4848 6327 -7 275 310 47 15 chr2 43289544 43290026 -207397828 + L1 LINE L1 2266 2762 -3384 1602 256 100 24 chr2 43290054 43290248 -207397606 + MLT1E LTR MaLR 1 179 -414 2311 172 24 7 chr2 43290248 43290667 -207397187 + MSTB LTR MaLR 1 426 0 1602 256 100 24 chr2 43290667 43291023 -207396831 + MLT1E LTR MaLR 179 593 0 1342 241 28 23 chr2 43291023 43291558 -207396296 + MLT1E-int LTR MaLR 15 663 -708 335 349 18 12 chr2 43291670 43291836 -207396018 + MLT1E-int LTR MaLR 692 858 -513 223 232 29 0 chr2 43292228 43292297 -207395557 + (TA)n Simple_repeat Simple_repeat 2 72 0 521 150 16 31 chr2 43292307 43292434 -207395420 + L1MC4 LINE L1 7918 8042 0 291 176 139 19 chr2 43292578 43292686 -207395168 + L1MC5 LINE L1 7807 7927 -34 2163 117 7 3 chr2 43292694 43292985 -207394869 + AluSx SINE Alu 1 292 -20 220 167 0 0 chr2 43293100 43293136 -207394718 - MIR SINE MIR -108 154 119 266 328 26 35 chr2 43293994 43294110 -207393744 + MER5B DNA MER1_type 61 175 -3 648 274 174 56 chr2 43294157 43294570 -207393284 - L2 LINE L2 0 3272 2811 318 226 17 70 chr2 43295083 43295198 -207392656 - MIR3 SINE MIR -24 184 76 1425 223 111 29 chr2 43295508 43296059 -207391795 - MER20B DNA MER1_type -1 782 187 1800 244 29 5 chr2 43296066 43296327 -207391527 + L1MD1 LINE L1 89 365 -6175 1683 113 0 32 chr2 43296327 43296575 -207391279 + AluSq SINE Alu 63 302 -11 1800 244 29 5 chr2 43296575 43296731 -207391123 + L1MD1 LINE L1 365 516 -6024 * 1900 149 45 0 chr2 43296719 43297095 -207390759 + L1MD1 LINE L1 1664 2056 -4484 716 131 37 0 chr2 43297102 43297209 -207390645 + AluSc SINE Alu 166 276 -33 813 127 13 13 chr2 43297212 43297370 -207390484 + GA-rich Low_complexity Low_complexity 3 160 0 1552 170 47 87 chr2 43297372 43297944 -207389910 + L1MD1 LINE L1 2011 2559 -3981 2343 96 0 10 chr2 43299071 43299383 -207388471 - AluSq SINE Alu -4 309 1 2744 247 30 8 chr2 43299973 43300845 -207387009 + L1MD1 LINE L1 2656 3546 -2994 * 5482 202 50 38 chr2 43300835 43302774 -207385080 + L1MD1 LINE L1 3901 5878 -758 2210 132 0 0 chr2 43302774 43303070 -207384784 + AluSx SINE Alu 3 298 -14 5482 202 50 38 chr2 43303070 43303833 -207384021 + L1MD1 LINE L1 5878 6630 -6 262 218 113 98 chr2 43303866 43303999 -207383855 - MER20B DNA MER1_type -591 192 58 246 313 52 26 chr2 43304071 43304186 -207383668 - MIR SINE MIR -84 178 61 22 0 0 0 chr2 43304264 43304286 -207383568 + AT_rich Low_complexity Low_complexity 1 22 0 992 313 183 37 chr2 43304376 43305938 -207381916 + L2 LINE L2 1437 3228 -44 25 31 0 0 chr2 43306402 43306434 -207381420 + AT_rich Low_complexity Low_complexity 1 32 0 356 295 121 32 chr2 43307316 43307506 -207380348 + MIR SINE MIR 47 253 -9 187 27 27 54 chr2 43309454 43309491 -207378363 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 1911 188 10 35 chr2 43309984 43310384 -207377470 - MLT1B LTR MaLR 0 390 1 730 277 98 29 chr2 43310885 43311232 -207376622 + MLT1J2 LTR MaLR 59 429 -21 867 199 39 0 chr2 43311364 43311520 -207376334 + FRAM SINE Alu 1 162 -4 196 283 130 33 chr2 43311708 43311800 -207376054 + MIR SINE MIR 17 117 -91 198 289 0 0 chr2 43311892 43311944 -207375910 + L2 LINE L2 3261 3312 -1 266 274 104 28 chr2 43312259 43312365 -207375489 + L2 LINE L2 3195 3308 -5 1385 285 99 60 chr2 43313247 43314124 -207373730 - L2 LINE L2 -405 2909 1999 497 294 19 12 chr2 43315506 43315666 -207372188 + MER5A DNA MER1_type 1 161 -28 237 276 10 31 chr2 43316078 43316176 -207371678 - MIR SINE MIR -3 259 164 653 210 64 0 chr2 43316412 43316442 -207371412 - L1MA10 LINE L1 -4 6330 6301 1063 243 26 31 chr2 43316442 43316792 -207371062 - L1ME1 LINE L1 -31 6135 5788 260 271 51 68 chr2 43317612 43317730 -207370124 - MIR SINE MIR -64 144 33 354 223 194 22 chr2 43318265 43318404 -207369450 - MIR SINE MIR 0 262 100 1878 166 13 0 chr2 43318474 43318775 -207369079 - AluJb SINE Alu -1 311 7 456 239 52 8 chr2 43318827 43318961 -207368893 - MIR SINE MIR -15 247 108 553 233 92 25 chr2 43319960 43320123 -207367731 + MIR SINE MIR 89 262 0 279 296 96 24 chr2 43320316 43320441 -207367413 + MIR SINE MIR 46 179 -83 245 160 20 0 chr2 43320543 43320593 -207367261 - MIR SINE MIR -50 212 162 361 80 0 0 chr2 43322314 43322364 -207365490 - AluSp/q SINE Alu -6 297 248 326 261 267 15 chr2 43322418 43322613 -207365241 + L1ME LINE L1 5533 5776 -345 247 279 51 0 chr2 43322788 43322867 -207364987 - MIR SINE MIR -131 131 49 2685 84 19 84 chr2 43323198 43323598 -207364256 + MLT2A1 LTR ERVL 1 367 -77 562 13 13 13 chr2 43323598 43323674 -207364180 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 2685 84 19 84 chr2 43323674 43323748 -207364106 + MLT2A1 LTR ERVL 367 444 0 204 67 0 0 chr2 43324141 43324171 -207363683 + (TC)n Simple_repeat Simple_repeat 2 31 0 390 225 158 17 chr2 43324253 43324373 -207363481 + MLT1J LTR MaLR 42 178 -333 396 258 140 27 chr2 43324459 43324645 -207363209 + MLT1J LTR MaLR 301 507 -4 1991 123 49 0 chr2 43324867 43325151 -207362703 - AluSx SINE Alu -14 298 1 251 283 53 19 chr2 43325706 43325887 -207361967 - MIR SINE MIR -2 260 27 1918 141 22 0 chr2 43325891 43326200 -207361654 - AluJo SINE Alu 0 315 1 619 202 59 127 chr2 43326286 43326539 -207361315 + MER106A DNA MER1_type 1 236 0 188 280 53 0 chr2 43326696 43326771 -207361083 - MIR SINE MIR -80 182 104 2203 112 7 0 chr2 43327226 43327520 -207360334 + AluSx SINE Alu 1 296 -16 22 56 0 0 chr2 43327667 43327703 -207360151 + AT_rich Low_complexity Low_complexity 1 36 0 188 304 22 54 chr2 43328109 43328201 -207359653 + MIR3 SINE MIR 99 187 -21 290 185 46 0 chr2 43328206 43328271 -207359583 + MIR3 SINE MIR 131 198 -10 * 340 273 57 0 chr2 43328268 43328356 -207359498 - MIR3 SINE MIR -35 173 81 279 325 13 13 chr2 43330290 43330441 -207357413 + MER5B DNA MER1_type 10 160 -18 619 226 55 167 chr2 43330453 43330707 -207357147 + L1MC4 LINE L1 7414 7695 -347 2365 104 10 0 chr2 43330707 43331016 -207356838 + AluSx SINE Alu 1 312 0 619 226 55 167 chr2 43331016 43331397 -207356457 + L1MC4 LINE L1 7695 7978 -64 1614 161 4 18 chr2 43331415 43331688 -207356166 - AluJo SINE Alu -16 296 28 712 220 62 0 chr2 43331959 43332136 -207355718 - MER5A DNA MER1_type 0 189 2 268 314 19 51 chr2 43332505 43332661 -207355193 - MIR3 SINE MIR -54 154 4 433 301 92 0 chr2 43332690 43332853 -207355001 - MIR SINE MIR -56 206 29 403 292 39 0 chr2 43333017 43333147 -207354707 - MIR SINE MIR -82 180 46 451 325 96 24 chr2 43334271 43334606 -207353248 - Charlie2 DNA MER1_type -2456 406 48 2507 121 6 6 chr2 43334725 43335089 -207352765 + THE1B LTR MaLR 1 364 0 240 167 0 0 chr2 43335633 43335675 -207352179 + MER5B DNA MER1_type 8 49 -129 689 130 0 0 chr2 43335690 43335790 -207352064 - HY3 scRNA scRNA -1 100 1 622 220 14 21 chr2 43335790 43335931 -207351923 + MER5B DNA MER1_type 37 176 -2 1144 184 104 27 chr2 43336091 43336334 -207351520 - Zaphod DNA AcHobo -48 3983 3705 2452 153 40 16 chr2 43336334 43336758 -207351096 - Tigger2a DNA MER2_type 0 434 1 1144 184 104 27 chr2 43336758 43336851 -207351003 - Zaphod DNA AcHobo -326 3705 3621 779 212 16 0 chr2 43336887 43337071 -207350783 - Zaphod DNA AcHobo -515 3516 3330 1364 140 71 81 chr2 43337071 43337539 -207350315 - THE1C LTR MaLR 0 428 1 * 7883 227 113 47 chr2 43337539 43338577 -207349277 - Zaphod DNA AcHobo -697 3334 2366 1902 131 11 7 chr2 43338577 43338859 -207348995 + AluSx SINE Alu 1 283 -29 7883 227 113 47 chr2 43338859 43339564 -207348290 - Zaphod DNA AcHobo -1665 2366 1709 2149 108 56 0 chr2 43339564 43339851 -207348003 + AluSx SINE Alu 1 303 -9 7883 227 113 47 chr2 43339851 43340344 -207347510 - Zaphod DNA AcHobo -2322 1709 1250 2164 113 75 20 chr2 43340344 43340689 -207347165 - THE1B LTR MaLR 0 364 1 7883 227 113 47 chr2 43340689 43340868 -207346986 - Zaphod DNA AcHobo -2781 1250 1084 1882 126 4 22 chr2 43340868 43341145 -207346709 - AluSx SINE Alu -21 291 20 7883 227 113 47 chr2 43341145 43341730 -207346124 - Zaphod DNA AcHobo -2947 1084 133 456 270 110 6 chr2 43342176 43342339 -207345515 + MIR SINE MIR 2 181 -81 1963 125 0 17 chr2 43342377 43342664 -207345190 + AluSc SINE Alu 2 283 -26 942 159 25 13 chr2 43342764 43342921 -207344933 - AluJo SINE Alu -153 159 1 2668 90 3 0 chr2 43344725 43345079 -207342775 - THE1A LTR MaLR 0 355 1 2124 131 0 3 chr2 43347512 43347817 -207340037 + AluSx SINE Alu 1 304 -8 351 203 0 0 chr2 43349592 43349661 -207338193 + U4 snRNA snRNA 1 69 -76 1571 182 31 21 chr2 43350227 43350518 -207337336 - AluJo SINE Alu -18 294 1 1707 152 25 39 chr2 43350643 43350926 -207336928 + AluSx SINE Alu 1 279 -33 310 306 0 0 chr2 43352388 43352473 -207335381 - L2 LINE L2 0 3272 3188 292 284 107 30 chr2 43352540 43352709 -207335145 - MIR SINE MIR -32 230 49 242 336 40 20 chr2 43352818 43352967 -207334887 + MIR SINE MIR 106 257 -5 2297 115 0 0 chr2 43353268 43353572 -207334282 + AluSx SINE Alu 1 304 -8 1781 165 23 26 chr2 43354003 43354312 -207333542 - AluJo SINE Alu -4 308 1 276 256 24 12 chr2 43354335 43354417 -207333437 + MIR SINE MIR 59 141 -121 1588 199 43 3 chr2 43354449 43354776 -207333078 + MER58B DNA MER1_type 2 341 0 388 264 16 24 chr2 43355143 43355268 -207332586 - MIR3 SINE MIR -4 204 81 429 267 53 0 chr2 43357920 43358051 -207329803 - L3b LINE CR1 -315 1268 1131 184 366 43 37 chr2 43358382 43358543 -207329311 + L2 LINE L2 2600 2761 -553 343 129 0 71 chr2 43358732 43358802 -207329052 - LTR67 LTR ERVL -2 555 491 435 196 22 0 chr2 43359055 43359147 -207328707 + MER53 DNA DNA 2 95 -94 338 207 23 11 chr2 43359070 43359157 -207328697 - MER53 DNA DNA -7 182 95 * 190 184 26 0 chr2 43359614 43359652 -207328202 - MIR SINE MIR -117 145 107 1066 188 29 24 chr2 43359719 43359926 -207327928 - MER58A DNA MER1_type -16 208 1 2000 107 3 82 chr2 43361018 43361346 -207326508 - AluSx SINE Alu -8 304 3 710 259 50 10 chr2 43361583 43361784 -207326070 + MIR SINE MIR 53 261 -1 933 241 19 5 chr2 43363037 43363050 -207324804 + MER20 DNA MER1_type 1 219 0 947 231 20 5 chr2 43363050 43363253 -207324601 + MER20 DNA MER1_type 14 219 0 880 181 13 7 chr2 43363582 43363737 -207324117 + AluSx SINE Alu 1 156 -156 232 100 0 0 chr2 43363737 43363777 -207324077 + Alu SINE Alu 262 301 0 805 254 41 29 chr2 43363839 43364083 -207323771 + MIR SINE MIR 16 262 0 2261 113 7 0 chr2 43364143 43364444 -207323410 + AluSx SINE Alu 1 303 -9 201 312 39 0 chr2 43364568 43364645 -207323209 - MIR3 SINE MIR -53 155 76 183 184 0 0 chr2 43364660 43364698 -207323156 + CT-rich Low_complexity Low_complexity 2 39 0 250 303 182 23 chr2 43365163 43365470 -207322384 + L3 LINE CR1 909 1264 -313 2127 134 0 10 chr2 43365631 43365937 -207321917 + AluSx SINE Alu 1 303 -9 1984 158 49 86 chr2 43366124 43366554 -207321300 - MLT2D LTR ERVL 0 414 1 444 284 62 64 chr2 43366807 43367313 -207320541 + L1MEd LINE L1 843 1446 -1044 2265 97 3 16 chr2 43367313 43367621 -207320233 + AluY SINE Alu 1 304 -7 444 284 62 64 chr2 43367621 43367803 -207320051 + L1MEd LINE L1 1446 1627 -863 1757 151 0 57 chr2 43367988 43368305 -207319549 + AluJo SINE Alu 12 310 -2 678 264 107 64 chr2 43368461 43368901 -207318953 + MLT1J LTR MaLR 45 503 -8 2724 237 45 43 chr2 43368910 43369715 -207318139 + MER21B LTR ERV1 1 806 -57 5829 26 2 2 chr2 43419795 43420416 -207267438 + SVA Other Other 766 1386 0 996 167 0 38 chr2 43420447 43420633 -207267221 - AluJb SINE Alu -11 301 123 334 190 121 35 chr2 43420711 43420827 -207267027 + L1ME2 LINE L1 5729 5854 -310 894 87 11 38 chr2 43420834 43421019 -207266835 + (TA)n Simple_repeat Simple_repeat 1 180 0 272 250 0 0 chr2 43421050 43421114 -207266740 - L1PA6 LINE L1 -17 6137 6074 942 57 0 8 chr2 43421450 43421572 -207266282 + L1PA7 LINE L1 6033 6153 -1 222 91 0 0 chr2 43421736 43421769 -207266085 + (T)n Simple_repeat Simple_repeat 1 33 0 438 220 46 9 chr2 43421927 43422036 -207265818 + MIR SINE MIR 66 178 -84 * 671 226 30 24 chr2 43422035 43422203 -207265651 + MIR SINE MIR 75 243 -19 1849 116 24 0 chr2 43422429 43422737 -207265117 + AluSx SINE Alu 26 339 0 5198 51 0 31 chr2 43423030 43423604 -207264250 - L1PA7 LINE L1 -103 6051 5502 2365 103 0 0 chr2 43423604 43423895 -207263959 - AluSc SINE Alu -17 292 2 5198 51 0 31 chr2 43423895 43424028 -207263826 - L1PA7 LINE L1 -652 5502 5366 2045 141 30 43 chr2 43424253 43424408 -207263446 + MLT1A1 LTR MaLR 2 158 -207 2245 112 10 13 chr2 43424408 43424720 -207263134 + AluSx SINE Alu 1 311 -1 2045 141 30 43 chr2 43424720 43424933 -207262921 + MLT1A1 LTR MaLR 158 365 0 5898 90 24 33 chr2 43425099 43426184 -207261670 + SVA Other Other 8 866 -520 1101 278 60 21 chr2 43428095 43428562 -207259292 - LTR33A LTR ERVL -38 485 1 897 233 11 0 chr2 43429657 43429833 -207258021 - MER45A DNA AcHobo 0 178 1 2021 125 7 4 chr2 43429935 43430391 -207257463 + AluJb SINE Alu 1 457 0 727 275 95 44 chr2 43430404 43430855 -207256999 + MLT1F LTR MaLR 68 541 -1 183 281 18 0 chr2 43432812 43432869 -207254985 - MIR SINE MIR -20 242 185 447 274 55 8 chr2 43433532 43433700 -207254154 + L1ME LINE L1 5493 5652 -469 1263 222 83 24 chr2 43433700 43433988 -207253866 + AluJo SINE Alu 3 307 -5 247 200 14 14 chr2 43434023 43434093 -207253761 + GA-rich Low_complexity Low_complexity 3 72 0 2158 135 10 0 chr2 43435123 43435420 -207252434 - AluSx SINE Alu -12 300 1 634 210 123 0 chr2 43435425 43435605 -207252249 - L1MC4a LINE L1 -430 5754 5689 1817 111 6 105 chr2 43436031 43436356 -207251498 - AluJb SINE Alu -19 293 1 3890 144 45 30 chr2 43436607 43437300 -207250554 - MER39 LTR ERV1 -4 703 1 532 256 121 10 chr2 43437374 43437573 -207250281 - MIR SINE MIR -38 224 4 293 268 63 42 chr2 43438001 43438143 -207249711 + Charlie8 DNA MER1_type 46 190 -2227 8774 241 101 36 chr2 43439361 43441853 -207246001 + L2 LINE L2 16 2345 -968 1823 170 0 23 chr2 43441853 43442159 -207245695 + AluJb SINE Alu 1 299 -13 8774 241 101 36 chr2 43442159 43442270 -207245584 + L2 LINE L2 2345 2447 -866 1314 178 152 0 chr2 43442270 43442534 -207245320 + AluJb SINE Alu 1 304 -8 8774 241 101 36 chr2 43442534 43443035 -207244819 + L2 LINE L2 2447 3312 -1 180 77 0 0 chr2 43443208 43443234 -207244620 + (GA)n Simple_repeat Simple_repeat 1 26 0 2195 98 0 0 chr2 43444376 43444652 -207243202 + AluSg SINE Alu 5 280 -30 189 147 0 0 chr2 43444657 43444691 -207243163 + (TG)n Simple_repeat Simple_repeat 1 34 0 335 183 0 17 chr2 43444691 43444751 -207243103 + L1MCa LINE L1 2006 2064 -4362 * 411 256 47 0 chr2 43444708 43444794 -207243060 - L1MC4 LINE L1 -1339 6703 6614 * 426 233 47 0 chr2 43444722 43444808 -207243046 + L1MC4 LINE L1 6614 6703 -1339 431 184 0 10 chr2 43444966 43445064 -207242790 + (CA)n Simple_repeat Simple_repeat 1 97 0 623 234 84 48 chr2 43445697 43445919 -207241935 - L1ME4a LINE L1 -2 6119 5880 2359 107 0 19 chr2 43445919 43446237 -207241617 + AluSx SINE Alu 1 312 0 623 234 84 48 chr2 43446237 43446347 -207241507 - L1ME4a LINE L1 -241 5880 5775 1184 153 186 5 chr2 43446790 43447005 -207240849 - AluJo SINE Alu -58 254 1 584 293 9 47 chr2 43447014 43447229 -207240625 + MIR SINE MIR 5 211 -51 632 253 54 7 chr2 43447243 43447520 -207240334 - L1ME4a LINE L1 -755 5391 5102 658 323 77 53 chr2 43448439 43448894 -207238960 - MLT1K LTR MaLR -121 467 2 423 262 95 0 chr2 43449584 43449742 -207238112 + MIR3 SINE MIR 20 194 -14 1870 143 7 4 chr2 43449852 43450132 -207237722 + AluSx SINE Alu 27 307 -5 213 361 12 0 chr2 43450574 43450657 -207237197 - L2 LINE L2 -2 3270 3187 323 223 30 176 chr2 43451036 43451269 -207236585 + L2 LINE L2 3115 3313 0 478 248 86 0 chr2 43452127 43452244 -207235610 - L2 LINE L2 -1 3312 3186 872 246 120 9 chr2 43452616 43452980 -207234874 - MER57A LTR ERV1 0 403 31 1551 154 14 134 chr2 43452982 43453332 -207234522 + AluYb8 SINE Alu 1 308 0 397 279 152 27 chr2 43453424 43453711 -207234143 + L1ME4a LINE L1 5509 5759 -362 2266 111 0 3 chr2 43453711 43454009 -207233845 + AluSx SINE Alu 1 297 -15 397 279 152 27 chr2 43454009 43454169 -207233685 + L1ME4a LINE L1 5759 6012 -109 753 235 37 23 chr2 43455593 43455810 -207232044 + L1MCc LINE L1 24 243 -6180 1059 146 30 90 chr2 43455914 43456147 -207231707 + MER20 DNA MER1_type 1 219 0 1692 177 32 64 chr2 43456212 43456585 -207231269 + MLT1A1 LTR MaLR 5 365 0 484 315 21 61 chr2 43456642 43457017 -207230837 - L1MEc LINE L1 -5837 559 200 1205 236 25 4 chr2 43457017 43457315 -207230539 + LTR40a LTR ERVL 14 259 -203 936 169 12 12 chr2 43457388 43457560 -207230294 + LTR40b LTR ERVL 291 462 0 644 338 107 25 chr2 43457562 43458000 -207229854 - L2 LINE L2 -31 3282 2809 674 271 6 18 chr2 43458005 43458175 -207229679 + MER5B DNA MER1_type 9 176 -2 540 272 36 93 chr2 43458191 43458262 -207229592 - L2 LINE L2 -508 2806 2732 2223 114 3 7 chr2 43458262 43458560 -207229294 + AluSq SINE Alu 1 297 -16 540 272 36 93 chr2 43458560 43458767 -207229087 - L2 LINE L2 -582 2732 2544 314 200 76 57 chr2 43458861 43458966 -207228888 - MLT1J LTR MaLR -1 510 404 250 158 0 0 chr2 43459008 43459046 -207228808 - MLT1L LTR MaLR -218 397 360 405 281 20 127 chr2 43459606 43459898 -207227956 - L2 LINE L2 -2 3270 3010 2191 105 0 7 chr2 43459899 43460208 -207227646 - AluSx SINE Alu 0 307 1 2047 149 13 7 chr2 43460233 43460542 -207227312 + AluJb SINE Alu 1 311 -1 2086 138 3 0 chr2 43461359 43461657 -207226197 + AluJb SINE Alu 1 299 -13 376 331 77 60 chr2 43462325 43462739 -207225115 + L2 LINE L2 2834 3254 -18 2198 121 0 7 chr2 43462745 43463051 -207224803 + AluSx SINE Alu 1 304 -8 265 188 14 29 chr2 43463297 43463366 -207224488 + CT-rich Low_complexity Low_complexity 4 71 0 201 304 36 0 chr2 43464491 43464547 -207223307 - L2 LINE L2 -2 3311 3254 2082 150 81 8 chr2 43464551 43464944 -207222910 + MSTA LTR MaLR 7 428 0 260 326 53 63 chr2 43464975 43465165 -207222689 - L2 LINE L2 -91 3181 2994 24 0 0 0 chr2 43466099 43466123 -207221731 + GC_rich Low_complexity Low_complexity 1 24 0 321 286 79 29 chr2 43466495 43466635 -207221219 + MIR SINE MIR 77 223 -39 2321 101 0 23 chr2 43467890 43468196 -207219658 - AluSg SINE Alu -10 300 2 620 229 0 0 chr2 43468198 43468320 -207219534 - MIR SINE MIR -69 193 72 258 269 151 84 chr2 43468321 43468440 -207219414 + L2 LINE L2 3137 3263 -9 2227 126 0 0 chr2 43468444 43468746 -207219108 - AluSq SINE Alu -11 302 1 254 277 0 0 chr2 43468919 43468984 -207218870 + MIR SINE MIR 102 166 -96 196 343 30 0 chr2 43469053 43469120 -207218734 + MIR SINE MIR 163 231 -31 1675 233 106 33 chr2 43469280 43469825 -207218029 - MLT1G1 LTR MaLR 0 595 11 340 318 0 40 chr2 43469825 43469951 -207217903 - MIR SINE MIR -72 136 16 499 306 29 87 chr2 43470894 43470995 -207216859 + MIR SINE MIR 29 134 -128 2575 51 0 0 chr2 43470995 43471288 -207216566 + AluY SINE Alu 2 294 -17 499 306 29 87 chr2 43471288 43471428 -207216426 + MIR SINE MIR 134 256 -6 722 25 0 0 chr2 43471853 43471934 -207215920 + AluY SINE Alu 79 159 -152 332 290 90 0 chr2 43473609 43473709 -207214145 + L1MC4 LINE L1 6613 6721 -1321 700 297 97 40 chr2 43473730 43474175 -207213679 - L1MC4a LINE L1 -1904 5904 5435 987 149 0 14 chr2 43474176 43474324 -207213530 + AluSq/x SINE Alu 2 147 -165 1443 173 0 0 chr2 43474324 43474544 -207213310 + AluSg/x SINE Alu 85 304 -8 200 245 19 19 chr2 43474637 43474690 -207213164 - MER5B DNA MER1_type -42 136 84 2132 228 50 87 chr2 43474714 43475102 -207212752 + L1ME3 LINE L1 5057 5458 -704 999 214 48 29 chr2 43475102 43475308 -207212546 + MER63A DNA MER1_type 1 210 0 2132 228 50 87 chr2 43475308 43475520 -207212334 + L1ME3 LINE L1 5458 5676 -486 1893 215 92 29 chr2 43475520 43475940 -207211914 + MLT2B1 LTR ERVL 1 393 -127 348 83 0 0 chr2 43475940 43475988 -207211866 + (TA)n Simple_repeat Simple_repeat 2 49 0 1893 215 92 29 chr2 43475988 43476015 -207211839 + MLT2B1 LTR ERVL 393 417 -103 557 52 13 0 chr2 43476015 43476092 -207211762 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 1893 215 92 29 chr2 43476092 43476131 -207211723 + MLT2B1 LTR ERVL 417 519 -1 2132 228 50 87 chr2 43476131 43476637 -207211217 + L1ME3 LINE L1 5676 6135 -27 1646 147 0 106 chr2 43476670 43477010 -207210844 - AluJo SINE Alu -8 304 1 21 57 0 0 chr2 43477014 43477049 -207210805 + AT_rich Low_complexity Low_complexity 1 35 0 403 365 17 59 chr2 43477237 43477527 -207210327 - L2 LINE L2 0 3272 2995 2282 143 13 19 chr2 43477559 43477936 -207209918 - THE1C LTR MaLR 0 375 1 401 286 50 8 chr2 43478308 43478427 -207209427 + L2 LINE L2 3190 3313 0 2411 78 14 0 chr2 43478588 43478881 -207208973 - AluSc SINE Alu -11 298 2 355 239 70 148 chr2 43479151 43479435 -207208419 + MIR SINE MIR 1 262 0 2575 170 79 38 chr2 43479919 43480266 -207207588 - MER69 DNA AcHobo -4 2522 2191 2302 118 0 0 chr2 43480266 43480565 -207207289 + AluSq SINE Alu 1 302 -11 633 27 0 0 chr2 43480565 43480640 -207207214 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 2575 170 79 38 chr2 43480646 43480980 -207206874 - MER69 DNA AcHobo -335 2191 1813 696 241 147 8 chr2 43480981 43481247 -207206607 - MER69 DNA AcHobo -389 837 535 1219 262 67 24 chr2 43481267 43481687 -207206167 + MLT1C LTR MaLR 22 459 -8 1450 241 61 48 chr2 43481700 43482086 -207205768 - MER69 DNA AcHobo -688 538 159 2053 115 32 0 chr2 43482086 43482364 -207205490 + AluSx SINE Alu 1 287 -25 666 62 0 0 chr2 43482364 43482460 -207205394 + (TA)n Simple_repeat Simple_repeat 2 97 0 1450 241 61 48 chr2 43482460 43482594 -207205260 - MER69 DNA AcHobo -1066 160 10 228 349 153 21 chr2 43483032 43483221 -207204633 + L3 LINE CR1 55 268 -1309 327 49 0 0 chr2 43483221 43483262 -207204592 + (TG)n Simple_repeat Simple_repeat 2 42 0 570 253 27 40 chr2 43483376 43483545 -207204309 - MIR3 SINE MIR -54 154 7 279 365 81 19 chr2 43483862 43484073 -207203781 + L3 LINE CR1 248 471 -1106 298 250 50 60 chr2 43484129 43484150 -207203704 + L3 LINE CR1 618 638 -939 2566 57 0 3 chr2 43484150 43484451 -207203403 - AluY SINE Alu -11 300 1 298 250 50 60 chr2 43484451 43484529 -207203325 + L3 LINE CR1 638 716 -861 238 307 105 55 chr2 43484672 43485049 -207202805 - L2 LINE L2 -154 3118 2728 535 327 110 32 chr2 43485151 43485497 -207202357 + L2 LINE L2 2836 3208 -64 239 95 48 0 chr2 43485527 43485569 -207202285 + GA-rich Low_complexity Low_complexity 4 47 0 1668 268 66 15 chr2 43485576 43486103 -207201751 - MLT1H1 LTR MaLR -1 554 1 1038 253 4 16 chr2 43486323 43486568 -207201286 + MIR SINE MIR 19 260 -2 305 274 53 0 chr2 43486932 43487027 -207200827 - L2 LINE L2 -1 3271 3172 2571 108 16 3 chr2 43487822 43488192 -207199662 - THE1C LTR MaLR 0 375 1 216 269 58 0 chr2 43488253 43488357 -207199497 + (CCCTAA)n Simple_repeat Simple_repeat 2 111 0 318 274 98 0 chr2 43489716 43489818 -207198036 - L2 LINE L2 -5 3267 3156 400 201 16 63 chr2 43489892 43490081 -207197773 + (CA)n Simple_repeat Simple_repeat 1 180 0 370 193 12 36 chr2 43490262 43490345 -207197509 + L2 LINE L2 3192 3272 0 266 237 41 31 chr2 43490563 43490660 -207197194 + LTR16B LTR ERVL 319 416 -48 456 255 0 22 chr2 43491223 43491407 -207196447 + G-rich Low_complexity Low_complexity 1 180 0 184 300 0 0 chr2 43493259 43493299 -207194555 + MIR SINE MIR 40 79 -129 939 265 26 0 chr2 43493312 43493542 -207194312 + MIR SINE MIR 21 256 -6 195 345 84 8 chr2 43493675 43493794 -207194060 + L2 LINE L2 2724 2851 -463 6330 33 83 13 chr2 43494149 43495339 -207192515 + SVA Other Other 1 1383 -3 191 271 42 0 chr2 43495402 43495450 -207192404 + L2 LINE L2 3261 3310 -3 262 289 36 0 chr2 43496936 43497019 -207190835 + L2 LINE L2 3187 3272 0 27 29 0 0 chr2 43498643 43498677 -207189177 + AT_rich Low_complexity Low_complexity 1 34 0 466 254 223 10 chr2 43499528 43499721 -207188133 - MIR SINE MIR -11 251 18 202 320 13 0 chr2 43500017 43500095 -207187759 + (CA)n Simple_repeat Simple_repeat 1 79 0 996 234 115 50 chr2 43501707 43501952 -207185902 + MLT1F1 LTR MaLR 123 408 -159 2364 71 0 7 chr2 43501952 43502247 -207185607 + AluSc SINE Alu 1 293 -16 996 234 115 50 chr2 43502247 43502419 -207185435 + MLT1F1 LTR MaLR 408 567 0 947 221 152 64 chr2 43502574 43502949 -207184905 + L2 LINE L2 2875 3282 -31 1697 146 78 21 chr2 43502955 43503228 -207184626 - MLT1A1 LTR MaLR -2 363 66 3485 115 8 2 chr2 43503228 43503722 -207184132 - LOR1a LTR ERV1 0 497 1 1697 146 78 21 chr2 43503722 43503783 -207184071 - MLT1A1 LTR MaLR -299 66 10 441 0 0 0 chr2 43503895 43503944 -207183910 + (TG)n Simple_repeat Simple_repeat 2 50 0 1949 82 0 4 chr2 43503944 43504189 -207183665 - AluSq SINE Alu -28 285 42 309 298 121 8 chr2 43504251 43504375 -207183479 - MIR SINE MIR -75 187 50 448 316 0 32 chr2 43504432 43504587 -207183267 - MIR SINE MIR -50 212 63 218 224 0 35 chr2 43504591 43504649 -207183205 - L2 LINE L2 -1 3271 3216 352 283 62 118 chr2 43504923 43505230 -207182624 - L1MB5 LINE L1 -136 6030 5743 571 298 10 5 chr2 43505350 43505564 -207182290 - L1MB5 LINE L1 -619 5547 5331 959 227 73 45 chr2 43505820 43506335 -207181519 + L1MC4 LINE L1 5125 5375 -789 260 174 0 0 chr2 43506335 43506381 -207181473 + Alu SINE Alu 243 288 -12 959 227 73 45 chr2 43506381 43506514 -207181340 + L1MC4 LINE L1 5375 5503 -661 375 277 71 0 chr2 43506522 43506634 -207181220 + L1ME3 LINE L1 5920 6039 -123 * 515 189 9 0 chr2 43506622 43506733 -207181121 + L1ME3A LINE L1 6059 6170 0 2334 98 0 19 chr2 43506994 43507310 -207180544 + AluSx SINE Alu 1 310 -2 340 306 60 15 chr2 43507333 43507467 -207180387 - MIR3 SINE MIR -68 140 1 1946 126 68 0 chr2 43508792 43509070 -207178784 - AluSg SINE Alu -13 297 1 537 254 16 8 chr2 43509106 43509232 -207178622 + AluJb SINE Alu 183 309 -3 793 251 81 9 chr2 43509317 43509528 -207178326 - MIR SINE MIR -17 245 20 2364 98 0 0 chr2 43510331 43510636 -207177218 - AluSq SINE Alu -8 305 1 321 264 251 18 chr2 43511115 43511282 -207176572 + MIR SINE MIR 2 207 -55 272 302 47 0 chr2 43511375 43511461 -207176393 - MIR SINE MIR -74 134 45 889 234 63 3 chr2 43511866 43512152 -207175702 - L1ME3A LINE L1 -9 6161 5859 441 111 0 0 chr2 43512182 43512245 -207175609 + L1PA8 LINE L1 6097 6159 -13 209 264 35 128 chr2 43512482 43512709 -207175145 - L2 LINE L2 -410 2904 2699 317 239 37 18 chr2 43512866 43512975 -207174879 + L1MD3 LINE L1 7877 7987 -8 234 0 0 0 chr2 43513605 43513631 -207174223 + (A)n Simple_repeat Simple_repeat 1 26 0 327 104 0 0 chr2 43513633 43513681 -207174173 + (TA)n Simple_repeat Simple_repeat 1 48 0 895 234 7 78 chr2 43513939 43513961 -207173893 + MIR SINE MIR 13 35 -227 1974 144 0 26 chr2 43513961 43514266 -207173588 + AluSx SINE Alu 1 297 -15 895 234 7 78 chr2 43514266 43514512 -207173342 + MIR SINE MIR 35 262 0 747 304 57 26 chr2 43515247 43515596 -207172258 + L2 LINE L2 2280 2639 -675 389 339 86 11 chr2 43515671 43515845 -207172009 - MER5A DNA MER1_type -2 187 1 915 227 34 96 chr2 43515927 43516167 -207171687 - L2 LINE L2 -8 3305 3096 2583 100 3 22 chr2 43516167 43516536 -207171318 + THE1B LTR MaLR 1 362 -2 915 227 34 96 chr2 43516536 43516682 -207171172 - L2 LINE L2 -217 3096 2943 279 185 33 0 chr2 43517081 43517173 -207170681 + GA-rich Low_complexity Low_complexity 4 98 0 2299 109 0 10 chr2 43517283 43517587 -207170267 + AluSg SINE Alu 1 301 -9 467 329 18 0 chr2 43519346 43519513 -207168341 - MIR SINE MIR -3 259 90 372 261 21 56 chr2 43522028 43522170 -207165684 - L3b LINE CR1 -169 1414 1278 186 43 0 0 chr2 43522460 43522483 -207165371 + (GA)n Simple_repeat Simple_repeat 2 24 0 349 217 0 0 chr2 43522485 43522545 -207165309 - AluJo SINE Alu -20 282 223 1093 193 17 0 chr2 43522545 43522726 -207165128 - AluJo SINE Alu -128 184 1 417 301 52 30 chr2 43522726 43522915 -207164939 - MIR SINE MIR -56 206 14 224 235 12 37 chr2 43523708 43523789 -207164065 + GA-rich Low_complexity Low_complexity 3 81 0 749 268 38 17 chr2 43524409 43524648 -207163206 - MIR SINE MIR 0 262 19 631 162 61 95 chr2 43525946 43526030 -207161824 + AluSg/x SINE Alu 137 215 -97 222 37 0 0 chr2 43526030 43526057 -207161797 + (CGGGGG)n Simple_repeat Simple_repeat 1 27 0 631 162 61 95 chr2 43526057 43526120 -207161734 + AluSg/x SINE Alu 215 279 -33 357 24 0 0 chr2 43526120 43526162 -207161692 + (CA)n Simple_repeat Simple_repeat 1 42 0 560 346 106 49 chr2 43526164 43526485 -207161369 - L2 LINE L2 -132 3140 2839 4202 127 1 28 chr2 43526485 43526556 -207161298 - MER41B LTR ERV1 0 635 564 2671 26 0 3 chr2 43526556 43526859 -207160995 + AluYa5 SINE Alu 1 302 -9 4202 127 1 28 chr2 43526859 43526917 -207160937 - MER41B LTR ERV1 -71 564 506 2166 130 0 3 chr2 43526917 43527217 -207160637 + AluSx SINE Alu 1 299 -13 4202 127 1 28 chr2 43527217 43527738 -207160116 - MER41B LTR ERV1 -129 506 1 560 346 106 49 chr2 43527738 43528095 -207159759 - L2 LINE L2 -433 2839 2422 513 248 67 8 chr2 43528310 43528492 -207159362 - MIR SINE MIR -37 225 30 2385 76 0 23 chr2 43529856 43530160 -207157694 + AluY SINE Alu 1 297 -14 252 310 110 10 chr2 43530259 43530359 -207157495 + L3 LINE CR1 990 1099 -478 * 865 248 64 72 chr2 43530341 43530732 -207157122 - L2 LINE L2 -1 3312 2925 181 383 39 23 chr2 43530704 43530832 -207157022 + L3 LINE CR1 1067 1196 -381 * 1876 160 13 3 chr2 43530991 43531298 -207156556 - AluJo SINE Alu -2 310 1 355 217 94 51 chr2 43531585 43531723 -207156131 - L2 LINE L2 -12 3301 3158 726 239 0 38 chr2 43531889 43532048 -207155806 + FRAM SINE Alu 1 153 -13 1419 188 78 44 chr2 43532167 43532460 -207155394 - AluJo SINE Alu -9 303 1 2450 107 0 0 chr2 43532866 43533176 -207154678 + AluSx SINE Alu 1 310 -2 531 300 45 20 chr2 43534284 43534484 -207153370 + MIR SINE MIR 20 224 -38 229 250 56 14 chr2 43534733 43534805 -207153049 + MIR SINE MIR 114 188 -74 2290 106 23 0 chr2 43536619 43536922 -207150932 + AluSx SINE Alu 1 310 -2 1749 169 10 20 chr2 43536937 43537238 -207150616 + AluJb SINE Alu 12 309 -3 617 178 0 25 chr2 43537247 43537404 -207150450 + GA-rich Low_complexity Low_complexity 3 155 0 2215 142 0 0 chr2 43540631 43540942 -207146912 + AluSx SINE Alu 1 311 -1 939 209 0 0 chr2 43540950 43541113 -207146741 + AluJb SINE Alu 137 299 -13 203 268 211 14 chr2 43541299 43541441 -207146413 - L2 LINE L2 -272 3000 2831 231 185 37 102 chr2 43541611 43541719 -207146135 + MER103 DNA DNA 65 165 -1 201 294 29 0 chr2 43542212 43542280 -207145574 + T-rich Low_complexity Low_complexity 5 74 0 1750 158 36 26 chr2 43542282 43542585 -207145269 - AluJo SINE Alu -2 310 5 617 220 254 6 chr2 43543020 43543197 -207144657 + MIR SINE MIR 2 222 -40 223 301 257 29 chr2 43544912 43545048 -207142806 + MER5A DNA MER1_type 16 182 -7 293 157 59 0 chr2 43545680 43545731 -207142123 + MER5B DNA MER1_type 1 54 -124 492 193 18 0 chr2 43545732 43545846 -207142008 - L1MA10 LINE L1 -7 6327 6212 1131 62 0 0 chr2 43545873 43546002 -207141852 - AluSq/x SINE Alu -182 130 2 4416 203 73 64 chr2 43546003 43547195 -207140659 - L1M4 LINE L1 -1009 5137 3958 1926 146 0 0 chr2 43547195 43547462 -207140392 + AluSx SINE Alu 1 267 -45 1017 113 0 0 chr2 43547465 43547624 -207140230 + (GAAA)n Simple_repeat Simple_repeat 4 162 0 4416 203 73 64 chr2 43547624 43547898 -207139956 - L1M4 LINE L1 -2189 3957 3653 2337 108 3 10 chr2 43547950 43548264 -207139590 - AluSq SINE Alu 0 313 2 2261 84 28 3 chr2 43548273 43548559 -207139295 - AluSx SINE Alu -19 293 1 2544 87 3 0 chr2 43548624 43548936 -207138918 - AluSp SINE Alu 0 313 1 23 0 0 0 chr2 43549690 43549713 -207138141 + AT_rich Low_complexity Low_complexity 1 23 0 429 284 83 65 chr2 43550094 43550401 -207137453 - L1ME4a LINE L1 -70 6051 5732 2223 104 3 0 chr2 43550401 43550688 -207137166 - AluSc SINE Alu -6 303 16 429 284 83 65 chr2 43550688 43550827 -207137027 - L1ME4a LINE L1 -389 5732 5597 2177 127 0 0 chr2 43550904 43551228 -207136626 + AluSx SINE Alu 1 312 0 452 193 25 134 chr2 43552358 43552596 -207135258 - L1MC5 LINE L1 -48 7913 7702 2325 104 3 3 chr2 43552596 43552903 -207134951 - AluSq SINE Alu -6 307 1 671 265 217 36 chr2 43554030 43554339 -207133515 + L2 LINE L2 2947 3311 -2 2080 156 169 14 chr2 43555413 43555850 -207132004 + MLT1D LTR MaLR 1 505 0 347 238 12 12 chr2 43555871 43555951 -207131903 - L2 LINE L2 -47 3266 3187 219 88 0 0 chr2 43556237 43556271 -207131583 + (TC)n Simple_repeat Simple_repeat 1 34 0 2383 59 38 0 chr2 43556495 43556784 -207131070 - AluSp SINE Alu -11 302 3 647 260 77 16 chr2 43557276 43557522 -207130332 - MIR SINE MIR 0 262 2 2229 109 30 0 chr2 43562360 43562662 -207125192 + AluSx SINE Alu 1 311 -1 658 272 49 36 chr2 43562666 43562890 -207124964 + MIR SINE MIR 19 245 -17 565 294 56 15 chr2 43565526 43565723 -207122131 + MIR SINE MIR 48 252 -10 486 268 14 29 chr2 43566440 43566508 -207121346 + MER5A DNA MER1_type 48 115 -74 1057 177 12 0 chr2 43566508 43566672 -207121182 + FRAM SINE Alu 1 166 0 486 268 14 29 chr2 43566672 43566741 -207121113 + MER5A DNA MER1_type 115 183 -6 28 61 0 0 chr2 43568343 43568392 -207119462 + AT_rich Low_complexity Low_complexity 1 49 0 211 311 14 0 chr2 43570045 43570119 -207117735 + L3b LINE CR1 1340 1414 -169 403 312 101 25 chr2 43570633 43570870 -207116984 + MIR SINE MIR 2 256 -6 205 299 78 13 chr2 43571343 43571420 -207116434 - MIR SINE MIR -24 238 157 310 264 9 28 chr2 43572225 43572331 -207115523 - LTR33 LTR ERVL -322 199 96 997 217 8 41 chr2 43572516 43572760 -207115094 + MER106A DNA MER1_type 1 236 0 2285 96 7 0 chr2 43572948 43573250 -207114604 + AluSq SINE Alu 1 304 -9 315 336 101 13 chr2 43574892 43575041 -207112813 + L1MC/D LINE L1 5616 5777 -2031 2083 107 50 10 chr2 43575102 43575401 -207112453 + AluSx SINE Alu 1 311 -1 7574 34 2 2 chr2 43575517 43576789 -207111065 - L1PA5 LINE L1 -9 6145 4873 2393 99 3 13 chr2 43576836 43577148 -207110706 - AluSq SINE Alu -4 309 1 331 253 7 84 chr2 43577447 43577601 -207110253 - Charlie8 DNA MER1_type -2275 142 1 2249 160 8 0 chr2 43579996 43580359 -207107495 + MER47A DNA MER2_type 1 366 0 2138 108 39 0 chr2 43580516 43580802 -207107052 + AluSx SINE Alu 1 297 -15 2320 89 0 0 chr2 43580804 43581144 -207106710 + AluY SINE Alu 1 340 0 2319 76 28 3 chr2 43581157 43581447 -207106407 + AluY SINE Alu 1 297 -14 586 305 68 4 chr2 43581909 43582145 -207105709 + MIR SINE MIR 12 262 0 994 198 6 0 chr2 43582596 43582758 -207105096 - FRAM SINE Alu -1 165 3 283 336 45 37 chr2 43583789 43583923 -207103931 - L2 LINE L2 0 3313 3179 820 221 0 6 chr2 43583974 43584132 -207103722 - FRAM SINE Alu -19 157 1 2504 199 27 40 chr2 43584169 43584718 -207103136 + MLT1F LTR MaLR 1 542 0 463 246 168 17 chr2 43584718 43584897 -207102957 - MIR SINE MIR -52 210 5 318 338 28 0 chr2 43584994 43585139 -207102715 - L2 LINE L2 -213 3059 2911 189 107 0 0 chr2 43585360 43585388 -207102466 + (T)n Simple_repeat Simple_repeat 1 28 0 2576 81 0 0 chr2 43585390 43585699 -207102155 - AluSc SINE Alu 0 309 1 1060 303 53 58 chr2 43585835 43585949 -207101905 + L3 LINE CR1 346 459 -1118 455 122 27 0 chr2 43585949 43586023 -207101831 + MADE1 DNA Mariner 1 76 -4 1060 303 53 58 chr2 43586023 43586489 -207101365 + L3 LINE CR1 459 923 -654 455 276 21 60 chr2 43588428 43588599 -207099255 - MIR3 SINE MIR -59 149 9 254 231 12 53 chr2 43589111 43589280 -207098574 + (TTATA)n Simple_repeat Simple_repeat 2 163 0 335 192 49 127 chr2 43590215 43590314 -207097540 + MIR SINE MIR 92 197 -65 2268 100 7 0 chr2 43590314 43590605 -207097249 - AluSx SINE Alu -14 298 6 335 192 49 127 chr2 43590605 43590632 -207097222 + MIR SINE MIR 197 225 -37 1965 124 4 4 chr2 43590632 43590906 -207096948 - AluSx SINE Alu -38 274 1 335 192 49 127 chr2 43590906 43590974 -207096880 + MIR SINE MIR 225 262 0 308 220 33 11 chr2 43591768 43591859 -207095995 + (TTCA)n Simple_repeat Simple_repeat 1 93 0 34 0 0 0 chr2 43592195 43592229 -207095625 + AT_rich Low_complexity Low_complexity 1 34 0 1047 227 144 49 chr2 43592371 43592779 -207095075 + L2 LINE L2 2622 3110 -203 306 106 0 0 chr2 43592779 43592826 -207095028 + (CA)n Simple_repeat Simple_repeat 1 47 0 1047 227 144 49 chr2 43592826 43593052 -207094802 + L2 LINE L2 3110 3313 0 204 197 0 66 chr2 43594434 43594495 -207093359 + CT-rich Low_complexity Low_complexity 5 61 0 481 328 91 0 chr2 43594506 43594692 -207093162 + MIR SINE MIR 20 222 -40 215 231 0 0 chr2 43594758 43594797 -207093057 + (CA)n Simple_repeat Simple_repeat 2 40 0 1758 195 44 16 chr2 43595716 43596080 -207091774 + MLT1A2 LTR MaLR 1 374 0 1016 231 41 16 chr2 43596382 43596624 -207091230 - MIR SINE MIR -3 259 12 511 187 57 32 chr2 43597776 43597899 -207089955 - MIR SINE MIR -58 204 79 664 261 90 18 chr2 43597905 43598274 -207089580 + MLT1J2 LTR MaLR 5 425 -25 646 222 254 1 chr2 43598823 43599095 -207088759 + L1MC4a LINE L1 5585 5758 -406 22 0 0 0 chr2 43599294 43599316 -207088538 + AT_rich Low_complexity Low_complexity 1 22 0 544 191 21 28 chr2 43600675 43600816 -207087038 - MER103 DNA DNA -7 159 20 459 0 0 0 chr2 43600900 43600951 -207086903 + (TG)n Simple_repeat Simple_repeat 2 52 0 944 142 62 31 chr2 43601338 43601500 -207086354 + MER5A DNA MER1_type 1 167 -22 805 261 139 13 chr2 43601665 43601975 -207085879 + L2 LINE L2 2963 3311 -2 200 156 22 22 chr2 43604760 43604805 -207083049 + GA-rich Low_complexity Low_complexity 1 45 0 469 162 0 0 chr2 43657445 43657519 -207030335 - AluS SINE Alu -239 74 1 524 133 0 0 chr2 43657541 43657616 -207030238 + AluJo SINE Alu 1 75 -237 843 119 0 24 chr2 43657724 43657850 -207030004 - FLAM_C SINE Alu -10 133 11 1091 218 0 5 chr2 43658064 43658280 -207029574 + AluJo SINE Alu 75 289 -23 324 251 134 53 chr2 43658314 43658485 -207029369 - MIR SINE MIR -75 187 3 21 0 0 0 chr2 43658554 43658575 -207029279 + AT_rich Low_complexity Low_complexity 1 21 0 571 306 90 5 chr2 43658994 43659216 -207028638 - L2 LINE L2 -681 2633 2393 1175 205 31 4 chr2 43659435 43659693 -207028161 - MER58 DNA MER1_type -2155 265 1 251 279 115 33 chr2 43659960 43660082 -207027772 - MLT1K LTR MaLR -146 442 311 25 31 0 0 chr2 43660338 43660370 -207027484 + AT_rich Low_complexity Low_complexity 1 32 0 577 56 0 0 chr2 43660472 43660543 -207027311 + AluS SINE Alu 2 72 -241 633 108 43 0 chr2 43660555 43660648 -207027206 + AluS SINE Alu 1 97 -216 227 118 0 0 chr2 43660748 43660782 -207027072 + Alu SINE Alu 257 290 -11 1334 126 9 14 chr2 43660816 43661030 -207026824 + AluJb SINE Alu 3 215 -97 24 32 0 0 chr2 43661057 43661088 -207026766 + AT_rich Low_complexity Low_complexity 1 31 0 1642 217 58 51 chr2 43661095 43661643 -207026211 + L1MB5 LINE L1 4740 5291 -855 256 228 0 0 chr2 43661677 43661734 -207026120 + L1MB5 LINE L1 5938 5994 -180 * 1561 173 40 106 chr2 43661732 43661990 -207025864 + L1ME1 LINE L1 5677 5886 -280 1746 172 3 18 chr2 43661990 43662275 -207025579 + AluJo SINE Alu 2 282 -30 1561 173 40 106 chr2 43662275 43662535 -207025319 + L1ME1 LINE L1 5886 6161 -5 339 333 104 28 chr2 43663460 43663709 -207024145 + L2 LINE L2 2579 2846 -468 1214 223 89 6 chr2 43663855 43664169 -207023685 - MER58B DNA MER1_type 0 341 2 868 241 102 55 chr2 43665010 43665430 -207022424 + L1MC4 LINE L1 7473 7912 -130 2182 112 7 0 chr2 43665434 43665730 -207022124 - AluSx SINE Alu -14 298 1 351 223 16 50 chr2 43665812 43665933 -207021921 + L1MC4 LINE L1 7926 8042 0 422 234 206 0 chr2 43666136 43666277 -207021577 + Charlie8 DNA MER1_type 22 191 -2226 1961 206 80 55 chr2 43666442 43667079 -207020775 - L1MC4 LINE L1 -152 7890 7238 1580 240 67 26 chr2 43667075 43667117 -207020737 - L1MC4a LINE L1 -809 6999 6960 * 2097 123 13 7 chr2 43667117 43667426 -207020428 - AluJb SINE Alu -1 311 1 1580 240 67 26 chr2 43667426 43667920 -207019934 - L1MC4a LINE L1 -848 6960 6441 1386 12 0 0 chr2 43667989 43668149 -207019705 - L1PA2 LINE L1 -1 6154 5995 1172 188 15 55 chr2 43668529 43668800 -207019054 - MLT1B LTR MaLR -2 388 129 931 179 6 6 chr2 43668811 43668973 -207018881 + AluSg/x SINE Alu 107 268 -42 581 212 30 38 chr2 43669015 43669147 -207018707 - L2 LINE L2 -8 3305 3175 26 50 0 0 chr2 43669558 43669598 -207018256 + AT_rich Low_complexity Low_complexity 1 40 0 989 30 8 15 chr2 43670062 43670193 -207017661 - L1PA4 LINE L1 0 6155 6026 21 0 0 0 chr2 43670583 43670604 -207017250 + AT_rich Low_complexity Low_complexity 1 21 0 579 277 66 51 chr2 43670996 43671252 -207016602 - MIR SINE MIR 0 262 3 2122 133 3 0 chr2 43672220 43672528 -207015326 - AluSx SINE Alu -3 309 1 371 319 112 6 chr2 43672904 43673073 -207014781 + L2 LINE L2 1814 2000 -1314 180 299 261 14 chr2 43673123 43673330 -207014524 + L2 LINE L2 2141 2398 -916 2307 96 0 0 chr2 43673490 43673783 -207014071 + AluY SINE Alu 1 293 -18 2200 84 10 7 chr2 43674534 43674843 -207013011 - AluY SINE Alu -1 310 1 2318 85 7 7 chr2 43675123 43675428 -207012426 - AluY SINE Alu -6 305 1 1947 128 0 35 chr2 43676885 43677025 -207010829 + AluSx SINE Alu 1 144 -168 2216 111 3 0 chr2 43677025 43677322 -207010532 + AluSq SINE Alu 1 298 -15 1947 128 0 35 chr2 43677322 43677493 -207010361 + AluSx SINE Alu 144 301 -11 612 255 129 21 chr2 43678172 43678458 -207009396 - L1ME3A LINE L1 -219 5951 5635 885 168 23 12 chr2 43678491 43678664 -207009190 + MER58A DNA MER1_type 49 223 -1 688 289 20 36 chr2 43678684 43678985 -207008869 - L1ME3A LINE L1 -526 5636 5341 1356 160 18 5 chr2 43679025 43679244 -207008610 - AluJb SINE Alu -88 224 3 1810 140 56 59 chr2 43679531 43679889 -207007965 - Tigger2 DNA MER2_type -2 2716 2360 2386 135 13 5 chr2 43679890 43680274 -207007580 + Tigger4(Zombi) DNA MER2_type 2345 2731 0 766 167 30 0 chr2 43680472 43680604 -207007250 + AluJo SINE Alu 1 136 -176 735 208 84 7 chr2 43680626 43680780 -207007074 - FRAM SINE Alu 0 166 1 1370 168 63 8 chr2 43680800 43681068 -207006786 - AluJo SINE Alu -17 295 13 374 265 44 52 chr2 43682003 43682139 -207005715 + MIR3 SINE MIR 64 198 -10 261 226 21 113 chr2 43682263 43682449 -207005405 - L1ME4a LINE L1 -17 6104 5936 294 288 72 13 chr2 43682506 43682719 -207005135 - L1ME4a LINE L1 -299 5822 5694 1744 104 39 72 chr2 43682870 43683177 -207004677 + AluSx SINE Alu 1 297 -15 293 236 22 45 chr2 43683382 43683471 -207004383 + MER94 DNA DNA 5 91 -43 621 318 23 0 chr2 43683507 43683680 -207004174 + L2 LINE L2 2577 2753 -561 249 303 107 13 chr2 43683728 43683864 -207003990 + MIR SINE MIR 2 142 -66 261 163 0 0 chr2 43684650 43684699 -207003155 + CT-rich Low_complexity Low_complexity 1 49 0 * 318 148 0 0 chr2 43684691 43684745 -207003109 + (TTTTC)n Simple_repeat Simple_repeat 5 58 0 1510 203 0 40 chr2 43684764 43685089 -207002765 - AluJo SINE Alu 0 312 1 239 296 198 12 chr2 43685546 43685627 -207002227 - MIR SINE MIR -68 140 45 2385 81 3 3 chr2 43686100 43686408 -207001446 - AluSc SINE Alu -1 308 1 1026 104 110 0 chr2 43686975 43687139 -207000715 + AluSp SINE Alu 116 297 -16 1859 150 0 40 chr2 43687216 43687542 -207000312 - AluSq SINE Alu 0 313 1 1482 112 121 0 chr2 43688082 43688331 -206999523 + MER7A DNA MER2_type 40 316 -30 1674 198 3 7 chr2 43688679 43688987 -206998867 - AluJb SINE Alu -5 307 1 381 263 8 8 chr2 43689393 43689511 -206998343 - L1M4 LINE L1 -876 5270 5153 1725 144 34 17 chr2 43689514 43689805 -206998049 - AluJb SINE Alu -8 304 9 271 259 0 12 chr2 43689856 43689937 -206997917 - L1M4 LINE L1 -1125 5021 4942 21 0 0 0 chr2 43690016 43690037 -206997817 + AT_rich Low_complexity Low_complexity 1 21 0 219 339 92 28 chr2 43691056 43691165 -206996689 + MIR SINE MIR 8 123 -139 221 239 0 0 chr2 43691178 43691245 -206996609 + (TTAA)n Simple_repeat Simple_repeat 3 69 0 1665 157 28 7 chr2 43692076 43692362 -206995492 - AluJb SINE Alu -16 296 5 627 259 54 6 chr2 43692911 43693077 -206994777 + MIR SINE MIR 3 176 -86 212 337 66 18 chr2 43693223 43693389 -206994465 - L2 LINE L2 -1605 1709 1536 830 144 0 29 chr2 43693425 43693564 -206994290 + FLAM_C SINE Alu 1 135 -8 2230 72 0 53 chr2 43695030 43695334 -206992520 + AluY SINE Alu 1 288 -23 738 213 50 26 chr2 43696213 43696405 -206991449 - MIR SINE MIR -1 261 67 2330 177 52 41 chr2 43696447 43696802 -206991052 + L1MA7 LINE L1 5589 5953 -338 2317 97 0 3 chr2 43696802 43697102 -206990752 + AluSx SINE Alu 1 299 -13 2330 177 52 41 chr2 43697102 43697261 -206990593 + L1MA7 LINE L1 5953 6109 -182 568 183 0 0 chr2 43697261 43697354 -206990500 + AluJ/FLAM SINE Alu 1 93 -219 1304 179 0 30 chr2 43697379 43697418 -206990436 + AluJo SINE Alu 55 94 -218 3005 91 84 0 chr2 43697418 43697836 -206990018 - MLT2A2 LTR ERVL 0 453 1 1304 179 0 30 chr2 43697836 43698031 -206989823 + AluJo SINE Alu 94 282 -30 867 193 16 16 chr2 43698050 43698237 -206989617 + L1MA7 LINE L1 6099 6285 -6 273 298 128 73 chr2 43698843 43698941 -206988913 - MIR SINE MIR 0 262 171 1708 174 7 4 chr2 43698941 43699222 -206988632 - AluJo SINE Alu -30 282 1 273 298 128 73 chr2 43699222 43699341 -206988513 - MIR SINE MIR -91 171 33 1365 223 33 21 chr2 43699379 43699711 -206988143 - MER58B DNA MER1_type 0 341 6 207 219 0 0 chr2 43700515 43700556 -206987298 + MIR SINE MIR 220 260 -2 902 207 28 94 chr2 43701074 43701227 -206986627 - L1MD3 LINE L1 -127 7868 7706 1440 221 7 7 chr2 43701227 43701516 -206986338 - AluJo SINE Alu -23 289 1 902 207 28 94 chr2 43701516 43701758 -206986096 - L1MD3 LINE L1 -289 7706 7421 322 295 80 9 chr2 43701842 43701954 -206985900 + MIR SINE MIR 41 160 -102 31 0 0 0 chr2 43703347 43703378 -206984476 + AT_rich Low_complexity Low_complexity 1 31 0 2182 108 16 3 chr2 43703429 43703735 -206984119 - AluSg SINE Alu 0 310 1 231 100 0 0 chr2 43703754 43703794 -206984060 - Alu SINE Alu -1 301 262 257 343 56 0 chr2 43703815 43703958 -206983896 - L1ME3A LINE L1 -32 6138 5988 302 175 95 0 chr2 43704402 43704465 -206983389 - MIR SINE MIR -70 192 124 293 250 50 0 chr2 43704530 43704630 -206983224 + MER113 DNA MER1_type? 2 106 -415 2094 115 3 0 chr2 43704650 43704970 -206982884 + AluSp SINE Alu 1 321 0 2349 130 220 133 chr2 43704982 43705514 -206982340 - L1MC3 LINE L1 -22 7763 7051 330 210 0 49 chr2 43705514 43705595 -206982259 - MLT1F1 LTR MaLR -445 122 46 2349 130 220 133 chr2 43705595 43705853 -206982001 - L1MC3 LINE L1 -734 7051 6817 274 231 62 0 chr2 43705953 43706018 -206981836 + MER113 DNA MER1_type? 320 388 -133 2074 141 7 3 chr2 43706839 43707145 -206980709 - AluSx SINE Alu -2 310 4 258 293 71 10 chr2 43707849 43707948 -206979906 + MIR3 SINE MIR 2 106 -102 1003 175 179 45 chr2 43708176 43708467 -206979387 - L1ME3A LINE L1 -88 6082 5753 25 0 0 0 chr2 43708741 43708766 -206979088 + AT_rich Low_complexity Low_complexity 1 25 0 185 237 0 0 chr2 43708941 43708979 -206978875 - L2 LINE L2 -4 3268 3231 1471 220 137 23 chr2 43709537 43710033 -206977821 - MLT1H1 LTR MaLR -10 585 6 1776 173 25 0 chr2 43710072 43710355 -206977499 - AluJb SINE Alu -22 290 1 319 307 80 12 chr2 43710525 43710688 -206977166 - L1MC4 LINE L1 -1 8041 7868 2053 138 3 16 chr2 43710915 43711227 -206976627 - AluSx SINE Alu -4 308 1 2402 87 0 0 chr2 43711233 43711543 -206976311 - AluSg SINE Alu 0 310 1 461 287 171 31 chr2 43712285 43712543 -206975311 - L3b LINE CR1 -71 1512 1219 3146 128 62 8 chr2 43713020 43713520 -206974334 + MER1A DNA MER1_type 1 527 0 622 230 0 30 chr2 43713830 43713965 -206973889 - FLAM_A SINE Alu -2 131 1 1321 181 13 4 chr2 43714202 43714439 -206973415 - MER8 DNA MER2_type 0 239 1 2112 116 0 26 chr2 43714638 43714949 -206972905 + AluSx SINE Alu 1 303 -9 7555 116 48 20 chr2 43715185 43716406 -206971448 + Tigger1 DNA MER2_type 1 1254 -1164 1848 164 10 7 chr2 43716406 43716580 -206971274 - AluJb SINE Alu -6 306 134 231 114 0 0 chr2 43716580 43716624 -206971230 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2083 124 0 0 chr2 43716624 43716906 -206970948 - AluSq SINE Alu -31 282 1 1848 164 10 7 chr2 43716906 43717035 -206970819 - AluJb SINE Alu -177 135 1 30 0 0 0 chr2 43717187 43717217 -206970637 + AT_rich Low_complexity Low_complexity 1 30 0 1541 188 66 6 chr2 43717297 43717616 -206970238 + MER58B DNA MER1_type 4 341 0 2190 80 0 24 chr2 43717785 43718107 -206969747 - AluY SINE Alu 0 315 1 3432 175 50 15 chr2 43719044 43719770 -206968084 - L1MB8 LINE L1 0 6178 5428 3279 156 65 5 chr2 43719770 43720399 -206967455 - L1MB4 LINE L1 0 6180 5510 3297 158 59 5 chr2 43719787 43720401 -206967453 - L1MB4 LINE L1 -26 6154 5508 406 165 0 35 chr2 43720404 43720489 -206967365 - L1MB4 LINE L1 -791 5387 5306 * 547 266 115 27 chr2 43720474 43720812 -206967042 - L1ME LINE L1 -538 5632 5265 203 321 38 0 chr2 43720891 43720944 -206966910 + L2 LINE L2 3201 3255 -17 1492 144 13 47 chr2 43721267 43721380 -206966474 + L1MA8 LINE L1 5999 6114 -177 2085 104 4 0 chr2 43721380 43721696 -206966158 + AluSg SINE Alu 1 317 0 1492 144 13 47 chr2 43721696 43721879 -206965975 + L1MA8 LINE L1 6114 6286 -5 1203 176 83 70 chr2 43722107 43722409 -206965445 - AluJb SINE Alu -6 306 1 21 0 0 0 chr2 43722476 43722497 -206965357 + AT_rich Low_complexity Low_complexity 1 21 0 1467 172 102 25 chr2 43722591 43722916 -206964938 + Tigger2a DNA MER2_type 1 350 -84 1957 158 0 3 chr2 43723133 43723443 -206964411 - AluSx SINE Alu -3 309 1 365 290 91 16 chr2 43724590 43724776 -206963078 - L2 LINE L2 -926 2388 2189 425 355 47 61 chr2 43724836 43725264 -206962590 - L2 LINE L2 -1324 1990 1569 261 0 0 0 chr2 43725710 43725739 -206962115 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1111 163 126 29 chr2 43726044 43726283 -206961571 - AluJo SINE Alu -15 297 36 1589 155 127 29 chr2 43728579 43728718 -206959136 - MER7A DNA MER2_type -2693 345 221 3238 138 33 6 chr2 43728718 43729231 -206958623 - MER1A DNA MER1_type 0 527 1 1589 155 127 29 chr2 43729231 43729407 -206958447 - MER7A DNA MER2_type -2817 221 1 258 361 41 10 chr2 43730487 43730584 -206957270 + L2 LINE L2 2659 2758 -556 338 354 50 17 chr2 43731195 43731376 -206956478 - L2 LINE L2 -421 2893 2707 606 217 37 12 chr2 43731385 43731546 -206956308 + MER104 DNA Tc2 16 180 0 1197 234 78 5 chr2 43731787 43732158 -206955696 + L1M4 LINE L1 4944 5341 -805 1868 160 0 22 chr2 43732220 43732539 -206955315 + AluJb SINE Alu 1 312 0 322 204 97 21 chr2 43732541 43732634 -206955220 + L1MB5 LINE L1 3100 3199 -2947 2029 161 77 0 chr2 43732685 43733064 -206954790 + L1MB5 LINE L1 5485 5892 -282 226 152 43 0 chr2 43733078 43733124 -206954730 + L1MB5 LINE L1 5987 6034 -140 2230 75 4 0 chr2 43733128 43733431 -206954423 - AluY SINE Alu 0 304 1 768 153 33 0 chr2 43733431 43733581 -206954273 + L1MB4 LINE L1 6018 6172 -8 2388 66 0 7 chr2 43735601 43735902 -206951952 + AluY SINE Alu 1 299 -12 29 28 0 0 chr2 43736423 43736459 -206951395 + AT_rich Low_complexity Low_complexity 1 36 0 2069 118 3 0 chr2 43736459 43736747 -206951107 - AluSp SINE Alu -24 289 1 2106 134 0 0 chr2 43737014 43737304 -206950550 + AluSx SINE Alu 3 292 -20 2511 74 0 3 chr2 43737766 43738077 -206949777 - AluY SINE Alu -1 310 1 959 107 0 15 chr2 43738079 43738210 -206949644 - AluJo/FLAM SINE Alu -181 131 3 2096 119 7 0 chr2 43738219 43738513 -206949341 - AluSx SINE Alu -16 296 1 202 224 0 20 chr2 43739174 43739223 -206948631 + GA-rich Low_complexity Low_complexity 4 51 0 2445 79 0 0 chr2 43741446 43741750 -206946104 - AluSc SINE Alu -5 304 1 2103 96 0 4 chr2 43741799 43742071 -206945783 - AluSc SINE Alu -33 276 6 1882 143 13 32 chr2 43742151 43742465 -206945389 - AluJb SINE Alu -4 308 1 391 326 82 30 chr2 43742574 43742709 -206945145 - MER5B DNA MER1_type -20 158 17 1733 119 32 77 chr2 43743140 43743452 -206944402 - AluSx SINE Alu -14 298 1 974 141 0 0 chr2 43743452 43743587 -206944267 - AluSq/x SINE Alu -177 135 1 1713 163 11 0 chr2 43744412 43744689 -206943165 - AluJo SINE Alu -30 282 3 21 0 0 0 chr2 43744698 43744719 -206943135 + AT_rich Low_complexity Low_complexity 1 21 0 226 338 122 0 chr2 43744773 43744912 -206942942 + MIR SINE MIR 51 206 -56 293 250 45 114 chr2 43744930 43745052 -206942802 - L2 LINE L2 -896 2418 2309 558 264 167 22 chr2 43745052 43745279 -206942575 + MIR SINE MIR 1 260 -2 866 200 30 1 chr2 43746163 43746463 -206941391 - MER2 DNA MER2_type 0 345 6 1643 191 7 3 chr2 43746492 43746785 -206941069 - AluJo SINE Alu -18 294 1 23 0 0 0 chr2 43747297 43747320 -206940534 + AT_rich Low_complexity Low_complexity 1 23 0 744 280 175 50 chr2 43747438 43747820 -206940034 - L2 LINE L2 0 3313 2884 203 246 82 0 chr2 43748148 43748209 -206939645 + MIR3 SINE MIR 112 177 -31 1314 158 10 5 chr2 43748324 43748533 -206939321 + AluJo SINE Alu 1 210 -102 1775 182 7 0 chr2 43748944 43749241 -206938613 - AluJb SINE Alu -13 299 1 22 0 0 0 chr2 43749330 43749352 -206938502 + AT_rich Low_complexity Low_complexity 1 22 0 1927 98 94 4 chr2 43749868 43750144 -206937710 + AluSx SINE Alu 1 301 -11 646 142 47 0 chr2 43750524 43750630 -206937224 - AluSp SINE Alu -202 111 1 185 299 26 39 chr2 43751805 43751882 -206935972 + MIR3 SINE MIR 132 207 -1 1075 201 94 10 chr2 43753118 43753417 -206934437 - MER33 DNA MER1_type 0 324 1 419 260 31 0 chr2 43753489 43753585 -206934269 + MIR3 SINE MIR 98 196 -12 234 288 47 13 chr2 43753705 43753783 -206934071 - MIR SINE MIR -125 83 3 518 281 88 56 chr2 43754207 43754492 -206933362 + MER102a DNA MER1_type 2 295 -35 192 239 125 34 chr2 43754699 43754787 -206933067 - MIR SINE MIR -54 208 113 2426 78 3 0 chr2 43755618 43755914 -206931940 - AluSg SINE Alu -13 297 1 2081 137 0 3 chr2 43756338 43756651 -206931203 + AluSx SINE Alu 1 312 0 2109 125 7 7 chr2 43756701 43756996 -206930858 + AluSq SINE Alu 3 297 -16 2422 163 95 26 chr2 43757166 43757509 -206930345 - L1PA16 LINE L1 -330 5836 5518 2343 64 0 55 chr2 43757509 43757821 -206930033 - AluY SINE Alu -16 295 1 216 0 0 0 chr2 43757829 43757853 -206930001 + (TTA)n Simple_repeat Simple_repeat 1 24 0 2422 163 95 26 chr2 43757853 43758130 -206929724 - L1PA16 LINE L1 -654 5512 5177 25 31 0 0 chr2 43758317 43758349 -206929505 + AT_rich Low_complexity Low_complexity 1 32 0 1481 171 131 10 chr2 43758445 43758750 -206929104 - MER2 DNA MER2_type -1 343 2 2251 106 0 3 chr2 43759159 43759460 -206928394 + AluSg SINE Alu 1 300 -10 380 246 51 46 chr2 43759552 43759734 -206928120 + MIR SINE MIR 2 212 -50 346 344 93 38 chr2 43760067 43760358 -206927496 + L2 LINE L2 3005 3311 -2 1539 156 25 22 chr2 43760461 43760736 -206927118 - AluJb SINE Alu -33 279 4 22 80 0 0 chr2 43761540 43761590 -206926264 + AT_rich Low_complexity Low_complexity 1 50 0 594 331 52 0 chr2 43761762 43762013 -206925841 + L1MC4a LINE L1 5665 5928 -1880 207 0 0 0 chr2 43763115 43763138 -206924716 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 623 175 8 33 chr2 43763138 43763258 -206924596 - FLAM_A SINE Alu -16 117 1 239 271 47 47 chr2 43763422 43763507 -206924347 + MIR3 SINE MIR 111 195 -13 747 217 64 72 chr2 43763571 43763634 -206924220 + MIR SINE MIR 12 74 -188 2144 125 0 3 chr2 43763634 43763946 -206923908 - AluY SINE Alu 0 311 1 747 217 64 72 chr2 43763946 43764117 -206923737 + MIR SINE MIR 74 244 -18 484 319 179 16 chr2 43767343 43767779 -206920075 + L2 LINE L2 2035 2541 -773 1840 144 0 59 chr2 43767833 43768153 -206919701 + AluSx SINE Alu 1 301 -11 21 57 0 0 chr2 43768370 43768405 -206919449 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 43768455 43768484 -206919370 + AT_rich Low_complexity Low_complexity 1 29 0 1832 151 0 17 chr2 43768494 43768786 -206919068 + AluJo SINE Alu 3 289 -23 25 31 0 0 chr2 43768786 43768818 -206919036 + AT_rich Low_complexity Low_complexity 1 32 0 1128 275 161 17 chr2 43768827 43769446 -206918408 + L1ME3A LINE L1 4459 4987 -1175 2185 108 7 16 chr2 43769446 43769753 -206918101 - AluSx SINE Alu -8 304 1 1128 275 161 17 chr2 43769753 43770101 -206917753 + L1ME3A LINE L1 4987 5559 -603 1528 264 63 16 chr2 43770268 43770835 -206917019 + L1ME3A LINE L1 5565 6169 -1 1666 147 38 3 chr2 43771156 43771448 -206916406 - AluJo SINE Alu -10 302 1 22 56 0 0 chr2 43771595 43771631 -206916223 + AT_rich Low_complexity Low_complexity 1 36 0 2178 102 3 3 chr2 43771663 43771956 -206915898 - AluSg1 SINE Alu -16 293 1 2048 135 0 3 chr2 43772461 43772758 -206915096 + AluSx SINE Alu 1 296 -16 189 0 0 0 chr2 43774525 43774546 -206913308 + (TC)n Simple_repeat Simple_repeat 2 22 0 314 243 0 14 chr2 43774886 43774960 -206912894 - Tigger5 DNA MER2_type 0 2323 2251 236 273 0 0 chr2 43774929 43774984 -206912870 - Tigger5 DNA MER2_type -2268 55 1 * 2423 161 7 49 chr2 43777414 43777724 -206910130 - L1MB7 LINE L1 -9 6175 5888 2267 100 13 0 chr2 43777724 43778033 -206909821 - AluSq SINE Alu 0 313 1 2423 161 7 49 chr2 43778033 43778174 -206909680 - L1MB7 LINE L1 -296 5888 5743 235 317 29 48 chr2 43778830 43778934 -206908920 + MIR SINE MIR 43 144 -64 26 50 0 0 chr2 43780195 43780235 -206907619 + AT_rich Low_complexity Low_complexity 1 40 0 773 188 14 0 chr2 43780257 43780401 -206907453 - L1MA6 LINE L1 -5 6295 6150 274 203 94 109 chr2 43780408 43780536 -206907318 - MIR SINE MIR -74 188 63 2294 107 0 0 chr2 43780581 43780881 -206906973 - AluSx SINE Alu -12 300 1 2494 63 0 0 chr2 43781691 43781993 -206905861 + AluY SINE Alu 1 302 -9 349 257 33 86 chr2 43782737 43782889 -206904965 - L2 LINE L2 -4 3309 3166 1991 107 11 0 chr2 43782908 43783171 -206904683 + AluSx SINE Alu 25 290 -22 757 148 70 0 chr2 43783185 43783300 -206904554 + FLAM_C SINE Alu 9 131 -12 22 56 0 0 chr2 43783595 43783631 -206904223 + AT_rich Low_complexity Low_complexity 1 36 0 187 290 122 38 chr2 43784496 43784532 -206903322 - MIR SINE MIR -12 250 218 2396 70 10 32 chr2 43784532 43784846 -206903008 - AluY SINE Alu -4 307 1 187 290 122 38 chr2 43784846 43784940 -206902914 - MIR SINE MIR -44 218 109 207 0 0 0 chr2 43785689 43785712 -206902142 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1946 126 11 3 chr2 43785717 43786002 -206901852 - AluSq SINE Alu -26 287 1 1722 141 45 24 chr2 43786269 43786560 -206901294 + AluJb SINE Alu 2 298 -14 236 88 0 0 chr2 43786585 43786619 -206901235 - L1MB8 LINE L1 -1 6177 6144 3895 170 87 37 chr2 43786637 43787171 -206900683 - L1MB7 LINE L1 -21 6163 5657 1844 161 0 40 chr2 43787171 43787495 -206900359 + AluJo SINE Alu 1 311 -1 3895 170 87 37 chr2 43787495 43787961 -206899893 - L1MB7 LINE L1 -527 5657 5114 1339 221 16 25 chr2 43787964 43788285 -206899569 - L1MB7 LINE L1 -1078 5068 4751 351 213 0 0 chr2 43788320 43788400 -206899454 + CT-rich Low_complexity Low_complexity 4 83 0 1983 144 10 3 chr2 43788402 43788693 -206899161 - AluSx SINE Alu -19 293 1 1636 122 111 8 chr2 43789338 43789600 -206898254 + AluJb SINE Alu 6 294 -18 31 44 0 0 chr2 43789894 43789939 -206897915 + AT_rich Low_complexity Low_complexity 1 45 0 802 172 0 0 chr2 43789940 43790056 -206897798 - FLAM_C SINE Alu -26 117 2 2689 107 65 81 chr2 43790287 43790605 -206897249 + MER4B LTR ERV1 1 323 -456 2247 102 0 0 chr2 43790605 43790900 -206896954 - AluY SINE Alu -16 295 1 2689 107 65 81 chr2 43790900 43790994 -206896860 + MER4B LTR ERV1 323 417 -362 2306 84 0 26 chr2 43790994 43791303 -206896551 - AluY SINE Alu -10 301 1 2689 107 65 81 chr2 43791303 43791488 -206896366 + MER4B LTR ERV1 417 770 -9 2103 102 3 33 chr2 43791693 43791997 -206895857 + AluSx SINE Alu 1 295 -17 2308 92 0 3 chr2 43792125 43792418 -206895436 + AluSx SINE Alu 2 293 -19 1517 193 7 29 chr2 43793641 43793947 -206893907 + AluJo SINE Alu 3 301 -11 403 136 17 0 chr2 43796237 43796296 -206891558 + MIR SINE MIR 2 61 -201 1526 152 81 27 chr2 43796755 43797051 -206890803 - AluJo SINE Alu 0 312 1 229 345 0 23 chr2 43797174 43797261 -206890593 - MIR SINE MIR -92 116 32 467 243 65 8 chr2 43797660 43797804 -206890050 + MIR SINE MIR 34 184 -67 771 139 0 33 chr2 43798269 43798391 -206889463 + FLAM_C SINE Alu 16 133 -10 401 330 87 23 chr2 43798406 43798579 -206889275 + MIR SINE MIR 31 214 -48 2376 64 7 3 chr2 43799149 43799445 -206888409 + AluY SINE Alu 1 297 -14 333 223 85 90 chr2 43799494 43799705 -206888149 - MLT1J LTR MaLR -138 373 164 321 314 163 15 chr2 43799781 43800106 -206887748 + L1M4 LINE L1 4286 4658 -1488 242 320 47 16 chr2 43800131 43800259 -206887595 + L1M4 LINE L1 4777 4908 -1238 489 277 130 16 chr2 43800259 43800443 -206887411 - MER3 DNA MER1_type 0 209 5 189 152 217 0 chr2 43800505 43800551 -206887303 + MER5B DNA MER1_type 123 178 0 2008 131 9 38 chr2 43801702 43802022 -206885832 + AluSx SINE Alu 1 311 -1 2023 128 17 3 chr2 43802060 43802356 -206885498 + AluSx SINE Alu 1 300 -12 1870 160 0 10 chr2 43802381 43802675 -206885179 + AluJb SINE Alu 1 291 -21 422 73 0 15 chr2 43803619 43803687 -206884167 + (TA)n Simple_repeat Simple_repeat 2 68 0 3485 155 61 27 chr2 43804593 43804647 -206883207 - L1MB8 LINE L1 0 6178 6127 2251 112 0 0 chr2 43804647 43804942 -206882912 + AluSx SINE Alu 1 295 -17 3485 155 61 27 chr2 43804942 43805544 -206882310 - L1MB8 LINE L1 -51 6127 5500 225 224 20 0 chr2 43805554 43805603 -206882251 - L1MB8 LINE L1 -1195 4951 4902 21 0 0 0 chr2 43806152 43806173 -206881681 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 43807350 43807374 -206880480 + AT_rich Low_complexity Low_complexity 1 24 0 1886 114 21 17 chr2 43812110 43812399 -206875455 + AluJb SINE Alu 2 291 -21 1967 119 3 33 chr2 43812594 43812897 -206874957 - AluSx SINE Alu -2 310 17 249 158 146 82 chr2 43812978 43813086 -206874768 + L1MC5 LINE L1 7545 7668 -293 2130 136 0 0 chr2 43813086 43813388 -206874466 + AluSx SINE Alu 1 302 -10 249 158 146 82 chr2 43813388 43813437 -206874417 + L1MC5 LINE L1 7668 7712 -249 346 244 281 12 chr2 43813611 43813771 -206874083 - MIR SINE MIR -52 210 8 341 226 80 51 chr2 43814908 43815045 -206872809 - L2 LINE L2 -3 3310 3170 911 226 193 35 chr2 43815309 43815791 -206872063 + L1MD2 LINE L1 5785 6342 -17 180 179 0 0 chr2 43817609 43817648 -206870206 + CT-rich Low_complexity Low_complexity 2 40 0 415 368 31 5 chr2 43817725 43817948 -206869906 - L1ME3 LINE L1 -67 6095 5867 2056 197 198 43 chr2 43822103 43822618 -206865236 - Charlie2 DNA MER1_type -6 2856 2423 2213 102 3 0 chr2 43822618 43822911 -206864943 + AluY SINE Alu 1 294 -17 2056 197 198 43 chr2 43822911 43823148 -206864706 - Charlie2 DNA MER1_type -439 2423 2224 2365 105 0 0 chr2 43823148 43823452 -206864402 + AluSp SINE Alu 1 304 -9 2056 197 198 43 chr2 43823452 43823565 -206864289 - Charlie2 DNA MER1_type -638 2224 1855 497 276 135 24 chr2 43823535 43823832 -206864022 - Charlie2 DNA MER1_type -2435 347 18 * 1453 161 82 14 chr2 43824544 43824823 -206863031 + AluJo SINE Alu 1 298 -14 24 67 0 0 chr2 43824858 43824903 -206862951 + AT_rich Low_complexity Low_complexity 1 45 0 1351 137 184 20 chr2 43824957 43825212 -206862642 - AluSx SINE Alu -15 297 1 722 310 71 15 chr2 43825221 43825614 -206862240 + L1MC4 LINE L1 5421 5835 -1973 2312 95 3 0 chr2 43825687 43825983 -206861871 + AluSp SINE Alu 1 297 -16 2311 217 140 81 chr2 43826029 43826685 -206861169 + L1MC4 LINE L1 6848 7464 -578 2136 129 0 3 chr2 43826685 43826979 -206860875 + AluSc SINE Alu 2 294 -15 2311 217 140 81 chr2 43826979 43827055 -206860799 + L1MC4 LINE L1 7464 7534 -508 3190 149 51 27 chr2 43827055 43827678 -206860176 + L1MB8 LINE L1 5536 6173 -5 2311 217 140 81 chr2 43827678 43828072 -206859782 + L1MC4 LINE L1 7534 8042 0 23 0 0 0 chr2 43829181 43829204 -206858650 + AT_rich Low_complexity Low_complexity 1 23 0 1854 154 3 33 chr2 43829739 43830044 -206857810 + AluJb SINE Alu 1 296 -16 1475 185 83 0 chr2 43830230 43830495 -206857359 - AluJo SINE Alu -25 287 1 1588 187 19 22 chr2 43831960 43832324 -206855530 + L1MB8 LINE L1 5816 6178 0 522 300 92 13 chr2 43832891 43833118 -206854736 - MIR SINE MIR 0 262 18 2489 90 0 0 chr2 43833762 43834073 -206853781 - AluSx SINE Alu -1 311 1 432 195 16 57 chr2 43834075 43834198 -206853656 - AluJb SINE Alu -10 302 185 1027 234 47 38 chr2 43834199 43834541 -206853313 + L2 LINE L2 2962 3306 -7 1832 164 17 7 chr2 43834692 43834985 -206852869 + AluJb SINE Alu 1 296 -16 1622 181 13 20 chr2 43835355 43835659 -206852195 - AluJo SINE Alu -10 302 1 1316 198 34 4 chr2 43836054 43836317 -206851537 - L1M4 LINE L1 -544 5640 5370 594 226 0 44 chr2 43836898 43837035 -206850819 + FLAM_A SINE Alu 2 132 -1 347 216 36 63 chr2 43837062 43837173 -206850681 + L1ME2 LINE L1 5770 5877 -285 572 261 31 0 chr2 43837173 43837303 -206850551 + FRAM SINE Alu 1 133 -43 706 222 87 34 chr2 43837303 43837510 -206850344 + L1ME2 LINE L1 5912 6129 -35 833 108 8 16 chr2 43837944 43838073 -206849781 - FLAM_C SINE Alu -5 128 1 315 184 48 48 chr2 43838361 43838464 -206849390 - MIR SINE MIR -132 130 28 688 188 123 6 chr2 43840466 43840636 -206847218 - MIR SINE MIR -68 194 5 2105 125 6 16 chr2 43840911 43841224 -206846630 - AluJb SINE Alu -2 310 1 1683 11 0 0 chr2 43842139 43842319 -206845535 + AluY SINE Alu 123 302 -9 2143 137 0 0 chr2 43843392 43843698 -206844156 + AluSq SINE Alu 1 306 -7 2025 128 21 0 chr2 43844195 43844484 -206843370 + AluJb SINE Alu 1 295 -17 200 264 100 0 chr2 43844504 43844585 -206843269 + MIR SINE MIR 32 123 -85 287 266 0 13 chr2 43845265 43845344 -206842510 + MIR SINE MIR 47 124 -84 318 174 330 0 chr2 43846650 43846765 -206841089 + MIR SINE MIR 96 248 -14 193 138 0 0 chr2 43846869 43846898 -206840956 + L2 LINE L2 3226 3254 -18 2420 93 0 0 chr2 43848389 43848699 -206839155 + AluY SINE Alu 1 310 -1 976 176 118 0 chr2 43848865 43849052 -206838802 + MER3 DNA MER1_type 1 209 0 1965 147 13 7 chr2 43849136 43849436 -206838418 + AluJo SINE Alu 1 302 -10 575 259 105 22 chr2 43851076 43851304 -206836550 + MIR SINE MIR 16 262 0 1312 91 10 35 chr2 43851347 43851544 -206836310 - AluSg/x SINE Alu 0 312 121 339 25 0 0 chr2 43851611 43851651 -206836203 + (TG)n Simple_repeat Simple_repeat 1 40 0 1245 128 44 0 chr2 43851663 43851866 -206835988 - L1MB3 LINE L1 -39 6144 5933 1908 147 0 13 chr2 43851867 43852167 -206835687 - AluJb SINE Alu -15 297 2 313 184 312 37 chr2 43852182 43852291 -206835563 + L2 LINE L2 3134 3272 0 1793 162 16 23 chr2 43852587 43852896 -206834958 + AluJo SINE Alu 3 309 -3 401 262 74 47 chr2 43853071 43853095 -206834759 + L1ME4a LINE L1 5593 5615 -506 2353 67 7 23 chr2 43853095 43853395 -206834459 + AluSc SINE Alu 1 295 -14 401 262 74 47 chr2 43853395 43853626 -206834228 + L1ME4a LINE L1 5615 5855 -266 836 233 147 22 chr2 43853664 43854092 -206833762 - MLT1J LTR MaLR -1 510 1 290 198 190 33 chr2 43854121 43854242 -206833612 + L1ME4a LINE L1 5981 6120 -1 2373 84 10 0 chr2 43854537 43854834 -206833020 + AluSp SINE Alu 1 300 -13 482 244 107 66 chr2 43855653 43855756 -206832098 - L1MC/D LINE L1 -2009 5799 5702 1660 178 21 11 chr2 43855756 43856043 -206831811 + AluJo SINE Alu 1 290 -22 207 0 0 0 chr2 43856043 43856066 -206831788 + (TG)n Simple_repeat Simple_repeat 2 24 0 482 244 107 66 chr2 43856066 43856203 -206831651 - L1MC/D LINE L1 -2105 5703 5548 308 256 16 39 chr2 43856420 43856549 -206831305 - L1MC/D LINE L1 -662 5504 5379 2391 95 0 0 chr2 43856774 43857070 -206830784 + AluSc SINE Alu 1 296 -13 654 178 76 54 chr2 43857207 43857265 -206830589 + MER53 DNA DNA 1 56 -133 477 167 167 83 chr2 43857265 43857385 -206830469 + FLAM_A SINE Alu 1 130 -3 654 178 76 54 chr2 43857385 43857511 -206830343 + MER53 DNA DNA 56 189 0 2510 175 46 28 chr2 43857547 43857951 -206829903 - MLT1D LTR MaLR 0 505 88 2251 99 3 0 chr2 43857951 43858270 -206829584 - AluSx SINE Alu 0 320 1 2510 175 46 28 chr2 43858270 43858360 -206829494 - MLT1D LTR MaLR -417 88 1 191 256 70 23 chr2 43858496 43858582 -206829272 + L2 LINE L2 3179 3268 -4 2271 119 0 0 chr2 43859307 43859609 -206828245 - AluSx SINE Alu -7 305 4 231 279 16 0 chr2 43860162 43860223 -206827631 - L2 LINE L2 0 3313 3252 2322 78 3 7 chr2 43860818 43861112 -206826742 - AluSc SINE Alu -16 293 1 3198 110 25 41 chr2 43863578 43863936 -206823918 - MER34B LTR ERV1 -54 511 162 2469 93 0 0 chr2 43863936 43864249 -206823605 + AluSq SINE Alu 1 313 0 3198 110 25 41 chr2 43864249 43864407 -206823447 - MER34B LTR ERV1 -403 162 3 281 338 56 14 chr2 43864860 43865002 -206822852 + L2 LINE L2 3087 3234 -38 2287 102 0 0 chr2 43865047 43865342 -206822512 - AluSp SINE Alu -18 295 1 296 299 8 34 chr2 43865990 43866107 -206821747 + MIR3 SINE MIR 8 121 -87 435 226 110 92 chr2 43866450 43866496 -206821358 - L1ME4a LINE L1 -53 6068 6024 1108 174 186 52 chr2 43866496 43866840 -206821014 - MLT1B LTR MaLR 0 390 1 435 226 110 92 chr2 43866840 43866953 -206820901 - L1ME4a LINE L1 -97 6024 5914 2130 135 3 0 chr2 43866953 43867264 -206820590 - AluSx SINE Alu 0 312 1 435 226 110 92 chr2 43867264 43867440 -206820414 - L1ME4a LINE L1 -207 5914 5726 259 330 116 0 chr2 43867473 43867585 -206820269 - L1ME4a LINE L1 -477 5644 5520 1263 213 0 14 chr2 43867595 43867881 -206819973 - L1MD3 LINE L1 0 7995 7714 2916 3 0 0 chr2 43869643 43869949 -206817905 - AluYa5 SINE Alu -5 306 1 2418 176 29 2 chr2 43870540 43870989 -206816865 - LOR1b LTR ERV1 0 461 1 638 238 25 19 chr2 43871098 43871258 -206816596 + MIR SINE MIR 86 246 -16 610 217 65 148 chr2 43871281 43871328 -206816526 - MLT1J LTR MaLR -60 451 402 2226 118 0 0 chr2 43871328 43871625 -206816229 + AluSx SINE Alu 3 299 -13 610 217 65 148 chr2 43871625 43871834 -206816020 - MLT1J LTR MaLR -109 402 227 2285 116 0 0 chr2 43871834 43872128 -206815726 - AluSx SINE Alu -18 294 1 610 217 65 148 chr2 43872128 43872207 -206815647 - MLT1J LTR MaLR -284 227 143 417 269 84 0 chr2 43872190 43872309 -206815545 - MLT1J LTR MaLR -312 199 71 * 517 71 0 14 chr2 43872556 43872626 -206815228 + MER4B LTR ERV1 1 69 -595 1598 101 34 22 chr2 43872639 43872941 -206814913 + MER4B LTR ERV1 261 610 0 911 241 104 21 chr2 43873131 43873467 -206814387 + HAL1 LINE L1 11 374 -2133 368 45 0 0 chr2 43873467 43873511 -206814343 + AluY SINE Alu 1 44 -259 2096 176 5 35 chr2 43873639 43873720 -206814134 - MER47A DNA MER2_type -1959 364 282 1739 170 17 14 chr2 43873720 43874014 -206813840 + AluJo SINE Alu 1 295 -17 2096 176 5 35 chr2 43874014 43874307 -206813547 - MER47A DNA MER2_type -2041 282 1 551 266 102 44 chr2 43874876 43875024 -206812830 + L1MC4a LINE L1 5673 5811 -1997 2078 113 51 0 chr2 43875024 43875316 -206812538 + AluSq SINE Alu 1 307 -6 551 266 102 44 chr2 43875316 43875441 -206812413 + L1MC4a LINE L1 5811 5962 -1846 241 252 122 9 chr2 43875698 43875805 -206812049 + L1ME4a LINE L1 5972 6090 -31 2384 91 0 0 chr2 43875989 43876340 -206811514 + AluY SINE Alu 1 311 0 343 179 44 77 chr2 43876984 43877092 -206810762 - L1MEd LINE L1 -751 5378 5284 2063 137 3 10 chr2 43877092 43877406 -206810448 - AluJb SINE Alu 0 312 1 343 179 44 77 chr2 43877406 43877460 -206810394 - L1MEd LINE L1 -845 5284 5230 189 0 0 0 chr2 43877577 43877598 -206810256 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 934 157 0 7 chr2 43878021 43878168 -206809686 + AluJb SINE Alu 149 294 -18 283 244 17 11 chr2 43879129 43879305 -206808549 + (TA)n Simple_repeat Simple_repeat 2 178 0 198 118 0 0 chr2 43879468 43879502 -206808352 + (TA)n Simple_repeat Simple_repeat 2 35 0 1785 156 21 7 chr2 43879502 43879785 -206808069 - AluJo SINE Alu -25 287 1 815 150 0 0 chr2 43879820 43879966 -206807888 + AluSg/x SINE Alu 170 315 0 2167 177 171 0 chr2 43879981 43880421 -206807433 + MLT2B2 LTR ERVL 1 515 0 971 118 0 0 chr2 43880451 43880578 -206807276 + FLAM_C SINE Alu 1 127 -6 930 277 127 22 chr2 43880578 43881171 -206806683 - L1MEd LINE L1 -1111 5018 4364 2027 136 0 7 chr2 43881195 43881490 -206806364 - AluJb SINE Alu -19 293 1 1784 148 54 3 chr2 43881515 43881812 -206806042 - AluSx SINE Alu 0 312 1 882 143 0 0 chr2 43881812 43881938 -206805916 - AluJo SINE Alu -176 136 11 632 300 61 32 chr2 43881949 43882326 -206805528 - L1MEd LINE L1 -2417 3712 3325 1925 140 3 3 chr2 43882493 43882785 -206805069 + AluSx SINE Alu 1 292 -20 503 250 98 83 chr2 43883299 43883490 -206804364 - L1MEd LINE L1 -2866 3263 3076 2134 116 0 17 chr2 43883490 43883653 -206804201 - AluSx SINE Alu -16 296 139 2443 70 3 0 chr2 43883653 43883953 -206803901 - AluY SINE Alu -10 301 1 2134 116 0 17 chr2 43883953 43884090 -206803764 - AluSx SINE Alu -173 139 1 503 250 98 83 chr2 43884090 43884272 -206803582 - L1MEd LINE L1 -3053 3076 2898 2142 125 3 3 chr2 43884272 43884567 -206803287 - AluSp SINE Alu -18 295 1 503 250 98 83 chr2 43884567 43884592 -206803262 - L1MEd LINE L1 -3231 2898 2875 2219 116 0 7 chr2 43884592 43884895 -206802959 + AluSg SINE Alu 1 301 -9 503 250 98 83 chr2 43884895 43885014 -206802840 - L1MEd LINE L1 -3254 2875 2736 1599 131 45 4 chr2 43885225 43885469 -206802385 - AluJb SINE Alu -12 300 47 7549 177 30 93 chr2 43885469 43887338 -206800516 + MER52A LTR ERV1 1 1753 -2 264 170 31 15 chr2 43887344 43887409 -206800445 - AluS SINE Alu -249 59 3 26 30 0 0 chr2 43887409 43887442 -206800412 + AT_rich Low_complexity Low_complexity 1 33 0 2114 130 16 3 chr2 43887469 43887777 -206800077 + AluJb SINE Alu 1 312 0 2040 257 45 30 chr2 43888046 43888707 -206799147 - L1MC4a LINE L1 -1841 5950 5280 749 300 56 40 chr2 43888918 43889533 -206798321 - L1MC4a LINE L1 -1071 5058 4430 2070 145 0 0 chr2 43889533 43889830 -206798024 - AluSx SINE Alu -15 297 1 749 300 56 40 chr2 43889830 43889871 -206797983 - L1MC4a LINE L1 -1699 4430 4391 249 284 80 56 chr2 43890528 43890778 -206797076 - L1MEd LINE L1 -3575 2554 2299 340 177 29 6 chr2 43890977 43891047 -206796807 - Alu SINE Alu -1 300 236 1150 146 4 131 chr2 43891055 43891330 -206796524 - AluJo SINE Alu -50 262 23 2735 93 25 3 chr2 43891633 43891998 -206795856 - THE1C LTR MaLR -2 373 1 26 0 0 0 chr2 43892154 43892180 -206795674 + AT_rich Low_complexity Low_complexity 1 26 0 564 285 112 50 chr2 43892195 43893163 -206794691 - L1MEd LINE L1 -825 1665 663 781 300 45 5 chr2 43893472 43893695 -206794159 + MLT1I LTR MaLR 164 395 -14 252 86 29 0 chr2 43893741 43893806 -206794048 + Alu SINE Alu 244 309 0 1917 134 105 123 chr2 43893810 43893960 -206793894 + L1MA6 LINE L1 5802 5953 -347 1654 138 3 57 chr2 43893960 43894243 -206793611 + AluSx SINE Alu 1 268 -44 1917 134 105 123 chr2 43894243 43894380 -206793474 + L1MA6 LINE L1 5953 6091 -209 700 216 24 0 chr2 43894380 43894505 -206793349 + FLAM_A SINE Alu 2 129 -4 1917 134 105 123 chr2 43894505 43894594 -206793260 + L1MA6 LINE L1 6091 6180 -120 1966 128 44 10 chr2 43894594 43894891 -206792963 + AluSx SINE Alu 1 307 -5 1917 134 105 123 chr2 43894891 43894998 -206792856 + L1MA6 LINE L1 6180 6278 -22 2076 122 21 0 chr2 43895016 43895304 -206792550 + AluSx SINE Alu 3 296 -16 1838 152 0 4 chr2 43895382 43895659 -206792195 - AluJb SINE Alu -26 286 11 2332 107 0 3 chr2 43895738 43896048 -206791806 + AluSg SINE Alu 1 309 -1 1143 126 27 27 chr2 43896060 43896433 -206791421 - L1MB4 LINE L1 -13 6167 5716 297 164 33 0 chr2 43896711 43896772 -206791082 - L1MB2 LINE L1 -3 6168 6106 2334 76 0 52 chr2 43897271 43897600 -206790254 - AluSx SINE Alu 0 312 1 2351 91 0 25 chr2 43897988 43898308 -206789546 + AluSq SINE Alu 1 312 -1 525 281 46 7 chr2 43898310 43898463 -206789391 + MIR SINE MIR 28 186 -76 2295 107 3 3 chr2 43898555 43898863 -206788991 + AluSq SINE Alu 1 308 -5 430 349 145 24 chr2 43899236 43899491 -206788363 - L2 LINE L2 0 3272 2987 24 32 0 0 chr2 43899544 43899575 -206788279 + AT_rich Low_complexity Low_complexity 1 31 0 336 307 40 45 chr2 43900106 43900186 -206787668 + L1ME LINE L1 5461 5540 -581 1976 171 96 6 chr2 43900186 43900549 -206787305 + MSTD LTR MaLR 1 396 0 336 307 40 45 chr2 43900549 43900670 -206787184 + L1ME LINE L1 5540 5661 -460 216 346 112 44 chr2 43901225 43901546 -206786308 + L2 LINE L2 2539 2881 -433 193 315 19 0 chr2 43901627 43901681 -206786173 + L2 LINE L2 3003 3057 -215 1421 110 9 14 chr2 43903247 43903466 -206784388 + AluSg/x SINE Alu 85 302 -10 23 0 0 0 chr2 43904116 43904139 -206783715 + AT_rich Low_complexity Low_complexity 1 23 0 2016 126 3 7 chr2 43905373 43905667 -206782187 + AluJb SINE Alu 5 297 -15 2057 132 13 13 chr2 43906227 43906537 -206781317 + AluSx SINE Alu 3 312 0 2198 140 0 0 chr2 43906885 43907193 -206780661 + AluSx SINE Alu 2 309 -3 361 197 14 0 chr2 43907562 43907633 -206780221 - ERVL LTR ERVL -2943 2821 2750 1621 186 0 4 chr2 43908132 43908401 -206779453 + AluJb SINE Alu 1 268 -44 441 0 0 0 chr2 43908411 43908460 -206779394 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 1594 199 9 22 chr2 43908515 43908831 -206779023 + AluJb SINE Alu 1 312 0 2064 132 14 3 chr2 43908875 43909171 -206778683 + AluSx SINE Alu 1 299 -13 2167 107 7 3 chr2 43909803 43910103 -206777751 + AluSx SINE Alu 1 301 -11 186 71 0 0 chr2 43910982 43911010 -206776844 + (A)n Simple_repeat Simple_repeat 1 28 0 1330 212 79 3 chr2 43911010 43911326 -206776528 + L1MB7 LINE L1 3951 4290 -1856 1484 158 31 73 chr2 43911326 43911504 -206776350 + MLT2B3 LTR ERVL 1 163 -391 2035 125 4 0 chr2 43911504 43911809 -206776045 + AluSx SINE Alu 1 306 0 1484 158 31 73 chr2 43911809 43911946 -206775908 + MLT2B3 LTR ERVL 163 304 -250 4567 152 72 114 chr2 43911947 43912217 -206775637 + L1MB7 LINE L1 4398 4678 -1506 1735 170 13 35 chr2 43912217 43912534 -206775320 + AluJo SINE Alu 1 310 -2 4567 152 72 114 chr2 43912534 43912619 -206775235 + L1MB7 LINE L1 4678 4765 -1419 889 99 0 0 chr2 43912619 43912740 -206775114 + AluSp/q SINE Alu 189 309 -4 4567 152 72 114 chr2 43912740 43913068 -206774786 + L1MB7 LINE L1 4765 5105 -1079 2293 92 0 16 chr2 43913068 43913372 -206774482 + AluSq SINE Alu 1 299 -14 4567 152 72 114 chr2 43913372 43914454 -206773400 + L1MB7 LINE L1 5105 6184 0 2249 124 0 0 chr2 43915703 43916010 -206771844 + AluSq SINE Alu 1 307 -6 507 100 14 0 chr2 43916240 43916310 -206771544 + FLAM SINE Alu 63 133 -10 33 66 0 0 chr2 43917252 43917313 -206770541 + AT_rich Low_complexity Low_complexity 1 61 0 1985 133 0 17 chr2 43917315 43917608 -206770246 - AluSx SINE Alu -23 289 2 195 129 0 0 chr2 43917634 43917665 -206770189 + (A)n Simple_repeat Simple_repeat 1 31 0 2231 97 14 0 chr2 43917699 43917989 -206769865 - AluSq SINE Alu -19 294 1 21 0 0 0 chr2 43918525 43918546 -206769308 + AT_rich Low_complexity Low_complexity 1 21 0 1680 175 7 30 chr2 43919145 43919448 -206768406 + AluJo SINE Alu 1 296 -16 242 228 0 18 chr2 43919730 43919787 -206768067 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 228 280 30 10 chr2 43919788 43919888 -206767966 + L1MC4 LINE L1 6613 6714 -1328 213 368 17 43 chr2 43919921 43920038 -206767816 - L2 LINE L2 -32 3240 3127 200 288 30 0 chr2 43920489 43920555 -206767299 + MIR3 SINE MIR 110 177 -31 1812 162 0 22 chr2 43922826 43923140 -206764714 + AluJb SINE Alu 1 307 -5 2088 133 0 0 chr2 43923780 43924073 -206763781 - AluSx SINE Alu -19 293 1 2260 99 0 13 chr2 43924221 43924525 -206763329 - AluSx SINE Alu -12 300 1 24 0 0 0 chr2 43924543 43924567 -206763287 + AT_rich Low_complexity Low_complexity 1 24 0 693 153 0 2 chr2 43924905 43925141 -206762713 + AluJ SINE Alu 1 293 -19 225 237 0 0 chr2 43925312 43925371 -206762483 - L1MC4 LINE L1 -1339 6703 6645 * 1391 255 148 15 chr2 43925348 43925563 -206762291 - L1MC4 LINE L1 -1849 5959 5774 1558 156 3 75 chr2 43925563 43925870 -206761984 - AluJo SINE Alu -14 298 14 1391 255 148 15 chr2 43925870 43926203 -206761651 - L1MC4 LINE L1 -2034 5774 5338 376 267 11 0 chr2 43926341 43926391 -206761463 + MER58B DNA MER1_type 1 54 -2366 378 0 0 0 chr2 43926391 43926433 -206761421 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 376 267 11 0 chr2 43926433 43926472 -206761382 + MER58B DNA MER1_type 54 91 -2329 370 253 113 33 chr2 43926595 43926640 -206761214 - L1MC4 LINE L1 -1342 4804 4764 1181 185 8 48 chr2 43926640 43926754 -206761100 - MER8 DNA MER2_type 0 239 122 2246 58 41 3 chr2 43926754 43927048 -206760806 + AluYa5 SINE Alu 1 305 -6 1181 185 8 48 chr2 43927048 43927182 -206760672 - MER8 DNA MER2_type -117 122 1 370 253 113 33 chr2 43927182 43927286 -206760568 - L1MC4 LINE L1 -1382 4764 4643 1166 186 35 18 chr2 43927288 43927514 -206760340 + MER58B DNA MER1_type 79 308 -33 1233 117 0 0 chr2 43927557 43927728 -206760126 - AluSg/x SINE Alu -5 307 137 476 118 0 0 chr2 43927728 43927796 -206760058 - AluJ/FLAM SINE Alu -243 69 2 213 182 0 23 chr2 43928074 43928118 -206759736 + MIR3 SINE MIR 161 203 -5 609 269 55 24 chr2 43928673 43928892 -206758962 - MIR SINE MIR 0 262 45 2212 111 0 0 chr2 43928969 43929276 -206758578 + AluSx SINE Alu 1 307 -5 1549 131 0 105 chr2 43929343 43929489 -206758365 + AluJo SINE Alu 2 96 -218 2273 83 0 3 chr2 43929489 43929779 -206758075 + AluSx SINE Alu 1 289 -23 1549 131 0 105 chr2 43929779 43929978 -206757876 + AluJo SINE Alu 96 314 0 626 211 12 25 chr2 43929978 43930139 -206757715 + L1M4 LINE L1 5178 5336 -810 736 86 9 0 chr2 43930156 43930261 -206757593 - L1MA3 LINE L1 0 6305 6200 216 0 0 0 chr2 43930266 43930290 -206757564 + (TA)n Simple_repeat Simple_repeat 2 25 0 2079 94 49 0 chr2 43930400 43930688 -206757166 - AluSx SINE Alu -10 302 1 403 273 13 65 chr2 43930920 43930935 -206756919 - L2 LINE L2 0 3313 3299 1836 171 0 3 chr2 43930935 43931244 -206756610 - AluJb SINE Alu -4 308 1 403 273 13 65 chr2 43931244 43931382 -206756472 - L2 LINE L2 -14 3299 3168 2139 117 0 0 chr2 43931389 43931697 -206756157 + AluSx SINE Alu 1 308 -4 538 118 39 39 chr2 43931721 43931823 -206756031 - L1MC1 LINE L1 0 6333 6232 430 187 24 36 chr2 43931825 43931991 -206755863 + (TTATA)n Simple_repeat Simple_repeat 1 164 0 746 157 0 99 chr2 43931992 43932099 -206755755 - L1MC1 LINE L1 -94 6239 6154 1784 151 7 3 chr2 43932099 43932397 -206755457 + AluJo SINE Alu 1 299 -13 746 157 0 99 chr2 43932397 43932461 -206755393 - L1MC1 LINE L1 -179 6154 6085 467 265 13 53 chr2 43932510 43932661 -206755193 - L2 LINE L2 -247 3066 2922 1539 168 6 50 chr2 43932762 43933084 -206754770 - AluJb SINE Alu -4 308 1 1389 194 30 4 chr2 43933266 43933534 -206754320 + AluJo SINE Alu 1 275 -37 1415 198 14 7 chr2 43933539 43933822 -206754032 + AluJo SINE Alu 10 294 -18 1640 106 141 4 chr2 43933824 43934121 -206753733 + AluSx SINE Alu 1 332 0 22 56 0 0 chr2 43934238 43934274 -206753580 + AT_rich Low_complexity Low_complexity 1 36 0 1723 153 0 31 chr2 43934274 43934568 -206753286 - AluJo SINE Alu -27 285 1 651 174 58 97 chr2 43934573 43934666 -206753188 - L1MC5 LINE L1 -36 7925 7830 2118 109 14 0 chr2 43934666 43934960 -206752894 + AluSx SINE Alu 1 298 -14 651 174 58 97 chr2 43934960 43935073 -206752781 - L1MC5 LINE L1 -131 7830 7727 315 187 8 194 chr2 43935362 43935434 -206752420 + MIR SINE MIR 49 86 -176 2059 113 3 0 chr2 43935434 43935725 -206752129 - AluY SINE Alu -15 296 5 315 187 8 194 chr2 43935725 43935786 -206752068 + MIR SINE MIR 86 157 -105 806 161 8 0 chr2 43936044 43936174 -206751680 + FLAM_C SINE Alu 1 131 -2 1814 125 7 24 chr2 43936300 43936596 -206751258 + AluSx SINE Alu 1 291 -21 2066 107 3 19 chr2 43936609 43936919 -206750935 + AluSq SINE Alu 1 305 -8 715 209 0 8 chr2 43936975 43937109 -206750745 - FLAM_A SINE Alu 0 133 1 1095 107 6 24 chr2 43937119 43937287 -206750567 + LTR39 LTR ERV1 1 165 -618 4024 85 5 14 chr2 43937289 43937840 -206750014 + MER41A LTR ERV1 3 548 -6 1116 103 5 33 chr2 43937840 43938024 -206749830 - AluSg/x SINE Alu 0 310 132 2133 108 7 0 chr2 43938024 43938321 -206749533 - AluSq SINE Alu -14 299 1 3438 140 32 81 chr2 43938345 43938851 -206749003 + LTR39 LTR ERV1 164 632 -151 1930 124 0 14 chr2 43938851 43939142 -206748712 - AluSx SINE Alu -25 287 1 3438 140 32 81 chr2 43939142 43939286 -206748568 + LTR39 LTR ERV1 632 782 -1 971 213 129 118 chr2 43939373 43939734 -206748120 + MER34B LTR ERV1 1 372 -193 2288 68 0 0 chr2 43939734 43940026 -206747828 + AluY SINE Alu 7 298 -13 971 213 129 118 chr2 43940026 43940223 -206747631 + MER34B LTR ERV1 372 565 0 1642 123 95 25 chr2 43940284 43940429 -206747425 - AluSx SINE Alu -7 305 172 2054 106 3 0 chr2 43940429 43940711 -206747143 - AluSx SINE Alu -20 292 10 1642 123 95 25 chr2 43940711 43940850 -206747004 - AluSx SINE Alu -140 172 1 291 87 22 0 chr2 43940884 43940930 -206746924 - L1MA10 LINE L1 -7 6327 6281 2248 100 0 0 chr2 43941126 43941427 -206746427 - AluSg SINE Alu -9 301 1 286 274 125 36 chr2 43941446 43941614 -206746240 - L2 LINE L2 -7 3306 3124 750 276 159 21 chr2 43941621 43942005 -206745849 - L2 LINE L2 -339 2975 2539 2279 71 0 14 chr2 43942557 43942854 -206745000 + AluY SINE Alu 2 294 -17 260 314 23 0 chr2 43943709 43943795 -206744059 + (CATATA)n Simple_repeat Simple_repeat 1 88 0 388 277 13 67 chr2 43943796 43943814 -206744040 - L1MC4a LINE L1 -1849 5959 5942 2243 100 3 0 chr2 43943814 43944124 -206743730 - AluSx SINE Alu -1 311 1 388 277 13 67 chr2 43944124 43944221 -206743633 - L1MC4a LINE L1 -1866 5942 5859 1801 146 30 3 chr2 43944221 43944516 -206743338 + AluJo SINE Alu 2 304 -8 388 277 13 67 chr2 43944516 43944623 -206743231 - L1MC4a LINE L1 -1949 5859 5748 261 290 247 0 chr2 43944665 43944827 -206743027 - MIR SINE MIR -59 203 2 371 287 39 44 chr2 43944835 43945016 -206742838 - L1MC4a LINE L1 -2066 5742 5563 1678 195 0 0 chr2 43945161 43945464 -206742390 - AluJb SINE Alu -9 303 1 456 110 268 0 chr2 43945467 43945549 -206742305 - L1MB7 LINE L1 -10 6174 6071 2067 106 0 20 chr2 43945558 43945860 -206741994 - AluSg SINE Alu -14 296 1 827 166 7 0 chr2 43945864 43946003 -206741851 - AluJo SINE Alu -169 143 4 544 237 89 7 chr2 43946064 43946199 -206741655 - L2 LINE L2 0 3313 3168 698 162 0 0 chr2 43946201 43946306 -206741548 + FLAM_A SINE Alu 22 126 -16 484 270 92 79 chr2 43946360 43946862 -206740992 - L2 LINE L2 -168 3145 2626 372 198 0 58 chr2 43947136 43947222 -206740632 + MER58B DNA MER1_type 3 83 -258 2095 110 10 0 chr2 43947222 43947514 -206740340 + AluSx SINE Alu 1 295 -17 488 204 28 0 chr2 43947518 43947626 -206740228 - FLAM_A SINE Alu 0 142 32 1655 129 19 4 chr2 43947626 43947889 -206739965 + MER58B DNA MER1_type 75 341 0 356 270 66 7 chr2 43947911 43948039 -206739815 + MIR SINE MIR 45 181 -27 1990 124 0 22 chr2 43948256 43948571 -206739283 - AluSx SINE Alu -1 311 4 1748 169 3 10 chr2 43948628 43948941 -206738913 - AluJo SINE Alu -1 311 1 1113 133 93 49 chr2 43949175 43949401 -206738453 + MER46A DNA MER2_type 1 236 0 1755 154 18 0 chr2 43949772 43950057 -206737797 + AluJb SINE Alu 1 290 -22 577 167 44 9 chr2 43950063 43950177 -206737677 + Charlie1 DNA MER1_type 2640 2757 -4 845 259 57 4 chr2 43950177 43950405 -206737449 + Charlie2 DNA MER1_type 74 313 -2549 1996 139 0 0 chr2 43950418 43950706 -206737148 - AluSx SINE Alu -24 288 1 1084 52 0 0 chr2 43950740 43950875 -206736979 + AluY SINE Alu 165 299 -12 315 0 0 0 chr2 43950879 43950914 -206736940 + (TG)n Simple_repeat Simple_repeat 2 36 0 226 196 0 0 chr2 43950914 43950960 -206736894 + L1MC4 LINE L1 6658 6703 -1339 1254 256 164 26 chr2 43951122 43951748 -206736106 + L1MC4a LINE L1 5352 6064 -1744 853 145 14 0 chr2 43951995 43952140 -206735714 - FRAM SINE Alu -10 166 20 2328 88 0 0 chr2 43952163 43952470 -206735384 - AluSx SINE Alu -5 307 1 728 185 0 0 chr2 43952633 43952752 -206735102 + AluJo SINE Alu 1 119 -193 584 77 13 0 chr2 43952747 43952825 -206735029 - AluSg SINE Alu -230 80 2 * 918 215 5 5 chr2 43952827 43953036 -206734818 + AluJo SINE Alu 102 310 -2 1015 85 0 0 chr2 43953913 43954043 -206733811 + AluSp SINE Alu 1 130 -183 207 0 0 0 chr2 43954043 43954066 -206733788 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 184 263 0 0 chr2 43954262 43954300 -206733554 + L2 LINE L2 3221 3258 -14 209 48 16 111 chr2 43956372 43956435 -206731419 + (CGGGA)n Simple_repeat Simple_repeat 3 59 0 196 188 62 0 chr2 43960159 43960207 -206727647 - L3b LINE CR1 0 1583 1533 180 0 0 0 chr2 43960220 43960240 -206727614 + (A)n Simple_repeat Simple_repeat 1 20 0 199 338 29 29 chr2 43960389 43960528 -206727326 + L2 LINE L2 2605 2743 -571 2014 106 6 40 chr2 43960535 43960856 -206726998 + AluSq SINE Alu 1 310 -3 2265 81 0 0 chr2 43960916 43961211 -206726643 + AluSg SINE Alu 1 295 -15 469 283 49 34 chr2 43961232 43961437 -206726417 + MIR SINE MIR 44 251 -11 3233 153 114 2 chr2 43961968 43962571 -206725283 - LTR51 LTR ERV1 0 671 1 678 172 15 22 chr2 43962649 43962783 -206725071 + L1MA9 LINE L1 6005 6137 -175 1599 68 10 0 chr2 43962783 43962989 -206724865 - AluSp SINE Alu -17 296 89 2004 114 7 0 chr2 43963284 43963585 -206724269 + AluSq SINE Alu 2 304 0 2307 81 3 0 chr2 43963585 43963895 -206723959 + AluY SINE Alu 1 311 0 25 0 0 0 chr2 43963895 43963920 -206723934 + AT_rich Low_complexity Low_complexity 1 25 0 270 106 0 0 chr2 43963966 43964013 -206723841 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 2027 138 3 0 chr2 43965779 43966083 -206721771 + AluSx SINE Alu 1 305 -7 1832 137 20 17 chr2 43966228 43966528 -206721326 - AluSx SINE Alu -11 301 1 1719 169 7 10 chr2 43966530 43966838 -206721016 - AluJo SINE Alu -5 307 1 2118 91 0 7 chr2 43966876 43967206 -206720648 - AluSx SINE Alu 0 328 1 651 209 35 0 chr2 43967208 43967323 -206720531 - FLAM_A SINE Alu -16 126 8 189 0 0 0 chr2 43967337 43967358 -206720496 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2112 101 3 0 chr2 43967361 43967647 -206720207 - AluSg SINE Alu -23 287 1 1232 67 0 18 chr2 43967656 43967867 -206719987 - AluY SINE Alu 0 328 121 1419 72 10 16 chr2 43967867 43968061 -206719793 - AluY SINE Alu -117 194 2 835 158 8 0 chr2 43968691 43968824 -206719030 + AluJo SINE Alu 2 135 -177 2085 118 0 0 chr2 43968825 43969131 -206718723 + AluSq SINE Alu 1 306 -7 2080 123 0 3 chr2 43969137 43969439 -206718415 + AluSq SINE Alu 1 301 -12 1912 113 53 10 chr2 43969442 43969742 -206718112 + AluSq SINE Alu 1 313 0 2084 100 20 3 chr2 43969751 43970052 -206717802 + AluSx SINE Alu 1 306 -6 4233 135 31 33 chr2 43970069 43970542 -206717312 + L1MC3 LINE L1 6706 7178 -607 1585 168 40 0 chr2 43970542 43970816 -206717038 + AluJo SINE Alu 1 285 -27 558 0 0 0 chr2 43970816 43970878 -206716976 + (CA)n Simple_repeat Simple_repeat 2 63 0 4233 135 31 33 chr2 43970878 43971171 -206716683 + L1MC3 LINE L1 7176 7472 -313 2096 122 0 0 chr2 43971171 43971474 -206716380 + AluSx SINE Alu 1 303 -9 628 160 76 8 chr2 43971476 43971595 -206716259 + FLAM_A SINE Alu 1 127 -6 1573 179 28 0 chr2 43971615 43971906 -206715948 + AluSq SINE Alu 1 299 -14 219 323 97 21 chr2 43972027 43972213 -206715641 + L2 LINE L2 2170 2369 -945 1768 142 54 3 chr2 43972418 43972713 -206715141 - AluJo SINE Alu -2 310 1 1931 181 133 29 chr2 43972905 43973358 -206714496 + MLT1F1 LTR MaLR 67 566 -1 2170 119 3 0 chr2 43973591 43973901 -206713953 - AluSx SINE Alu -1 311 1 1200 156 0 15 chr2 43974367 43974566 -206713288 + AluJo SINE Alu 7 202 -110 249 108 0 0 chr2 43974602 43974639 -206713215 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 1907 158 3 7 chr2 43974654 43974957 -206712897 - AluJo SINE Alu -10 302 1 255 271 105 64 chr2 43975076 43975475 -206712379 + MLT1J LTR MaLR 13 425 -21 666 165 0 0 chr2 43975479 43975793 -206712061 + AluJb SINE Alu 2 315 0 2045 97 0 75 chr2 43976152 43976471 -206711383 - AluY SINE Alu -16 295 1 1251 45 0 0 chr2 43976805 43976962 -206710892 - L1PA4 LINE L1 0 6155 5999 1789 135 7 17 chr2 43977031 43977320 -206710534 - AluSq SINE Alu 0 313 28 907 66 22 44 chr2 43977323 43977506 -206710348 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1758 173 0 10 chr2 43977506 43977807 -206710047 - AluSx SINE Alu -14 298 1 775 165 0 15 chr2 43978076 43978209 -206709645 - FLAM_A SINE Alu 0 133 3 320 241 25 86 chr2 43978467 43978541 -206709313 - L2 LINE L2 -1 3312 3252 2640 129 20 67 chr2 43978541 43978621 -206709233 + MER101 LTR ERV1 2 84 -390 2363 109 0 0 chr2 43978621 43978925 -206708929 + AluSc SINE Alu 1 304 -5 2640 129 20 67 chr2 43978925 43979340 -206708514 + MER101 LTR ERV1 84 474 0 320 241 25 86 chr2 43979340 43979427 -206708427 - L2 LINE L2 -61 3252 3161 296 67 0 44 chr2 43979440 43979485 -206708369 + L1MC3 LINE L1 7409 7451 -334 31 0 0 0 chr2 43979491 43979522 -206708332 + AT_rich Low_complexity Low_complexity 1 31 0 569 277 8 0 chr2 43979559 43979689 -206708165 + FLAM_A SINE Alu 3 133 0 2188 115 0 13 chr2 43979767 43980072 -206707782 - AluY SINE Alu -10 301 1 2245 100 3 0 chr2 43980075 43980365 -206707489 - AluSx SINE Alu -19 293 3 400 268 27 18 chr2 43980435 43980547 -206707307 + MIR SINE MIR 20 132 -130 2045 155 69 3 chr2 43980582 43980957 -206706897 - MER57A LTR ERV1 0 403 4 2320 69 14 0 chr2 43981753 43982044 -206705810 + AluSq SINE Alu 1 295 -18 1459 85 16 0 chr2 43982060 43982248 -206705606 + AluY SINE Alu 6 196 -115 198 0 0 0 chr2 43982661 43982683 -206705171 + (TA)n Simple_repeat Simple_repeat 2 23 0 523 174 0 43 chr2 43982683 43982775 -206705079 - FRAM SINE Alu -15 161 74 6451 107 8 28 chr2 43982776 43983209 -206704645 - L1MA2 LINE L1 -113 6191 5751 234 0 0 0 chr2 43983209 43983235 -206704619 + (TG)n Simple_repeat Simple_repeat 2 27 0 2073 127 3 0 chr2 43983235 43983519 -206704335 - AluSx SINE Alu -27 285 1 6451 107 8 28 chr2 43983519 43984404 -206703450 - L1MA2 LINE L1 -551 5753 4892 3491 170 89 36 chr2 43984403 43984867 -206702987 + L1MB2 LINE L1 5323 5848 -323 * 2264 103 23 0 chr2 43984867 43985169 -206702685 + AluSx SINE Alu 1 309 -3 3491 170 89 36 chr2 43985169 43985504 -206702350 + L1MB2 LINE L1 5848 6164 -7 283 288 0 0 chr2 43985523 43985582 -206702272 - tRNA-Leu-CTT tRNA tRNA -5 80 22 554 148 222 9 chr2 43985595 43985703 -206702151 - FLAM_C SINE Alu -11 132 2 1393 184 22 65 chr2 43985916 43986237 -206701617 + AluJo SINE Alu 1 307 -5 233 223 20 54 chr2 43986335 43986483 -206701371 + (TATAA)n Simple_repeat Simple_repeat 3 145 0 1567 165 55 24 chr2 43986677 43986968 -206700886 + AluJb SINE Alu 1 300 -12 481 237 40 50 chr2 43987479 43987640 -206700214 - MIR SINE MIR 0 262 102 1611 184 10 33 chr2 43987640 43987945 -206699909 + AluJb SINE Alu 1 298 -14 481 237 40 50 chr2 43987945 43987981 -206699873 - MIR SINE MIR -160 102 67 465 98 0 0 chr2 43988003 43988064 -206699790 + Alu SINE Alu 2 62 -250 378 0 0 0 chr2 43988065 43988107 -206699747 + (CA)n Simple_repeat Simple_repeat 1 42 0 1006 156 12 0 chr2 43988109 43988269 -206699585 + FRAM SINE Alu 1 162 -14 613 198 9 18 chr2 43988277 43988388 -206699466 + FLAM_A SINE Alu 1 110 -32 2148 85 3 11 chr2 43989370 43989652 -206698202 + AluSq SINE Alu 19 298 -15 449 182 8 83 chr2 43990110 43990132 -206697722 + L1MD3 LINE L1 7871 7893 -102 2438 84 0 0 chr2 43990132 43990431 -206697423 + AluY SINE Alu 1 299 -12 449 182 8 83 chr2 43990431 43990519 -206697335 + L1MD3 LINE L1 7893 7974 -21 1470 183 52 4 chr2 43990519 43990787 -206697067 + AluJo SINE Alu 1 281 -31 26 64 0 0 chr2 43990805 43990852 -206697002 + AT_rich Low_complexity Low_complexity 1 47 0 2400 103 0 0 chr2 43991317 43991628 -206696226 + AluY SINE Alu 1 311 0 2030 117 58 0 chr2 43992854 43993145 -206694709 + AluSx SINE Alu 1 308 -4 603 148 0 10 chr2 43994703 43994804 -206693050 - AluJ/FLAM SINE Alu -211 101 2 1178 217 52 72 chr2 43995544 43995643 -206692211 + L1ME LINE L1 4958 5057 -1107 2204 135 0 0 chr2 43995643 43995954 -206691900 - AluJb SINE Alu -1 311 1 1178 217 52 72 chr2 43995954 43996432 -206691422 + L1ME LINE L1 5057 5531 -633 1683 144 65 82 chr2 43996432 43996561 -206691293 + MER7A DNA MER2_type 1 131 -2907 2217 123 0 7 chr2 43996561 43996870 -206690984 + AluSx SINE Alu 1 307 -5 1683 144 65 82 chr2 43996870 43997094 -206690760 + MER7A DNA MER2_type 131 346 0 1178 217 52 72 chr2 43997094 43997121 -206690733 + L1ME LINE L1 5531 5557 -607 374 162 0 15 chr2 43997121 43997189 -206690665 - MADE1 DNA Mariner -1 79 13 2488 70 0 0 chr2 43997191 43997490 -206690364 - AluSx SINE Alu -13 299 1 567 287 45 73 chr2 43997503 43997823 -206690031 + L1ME LINE L1 3329 3656 -2490 2357 104 0 0 chr2 43997823 43998121 -206689733 + AluSx SINE Alu 1 298 -14 1881 157 3 7 chr2 43998131 43998424 -206689430 + AluJb SINE Alu 7 298 -14 567 287 45 73 chr2 43998424 43998555 -206689299 + L1ME LINE L1 3665 3778 -2368 324 291 164 0 chr2 43998564 43998698 -206689156 + L1ME LINE L1 4077 4232 -1914 285 274 0 0 chr2 43998744 43998817 -206689037 - Tigger5 DNA MER2_type 0 2323 2251 283 208 0 0 chr2 43998787 43998840 -206689014 - Tigger5 DNA MER2_type -2269 54 2 * 335 261 72 80 chr2 43998854 43999110 -206688744 + L1ME LINE L1 4303 4559 -1587 2319 104 0 7 chr2 43999110 43999419 -206688435 + AluSg1 SINE Alu 1 307 -2 335 261 72 80 chr2 43999419 43999574 -206688280 + L1ME LINE L1 4559 4714 -1432 2246 107 0 0 chr2 43999574 43999872 -206687982 + AluSg SINE Alu 1 298 -12 335 261 72 80 chr2 43999872 44000234 -206687620 + L1ME LINE L1 4714 5174 -972 24 32 0 0 chr2 44000724 44000755 -206687099 + AT_rich Low_complexity Low_complexity 1 31 0 502 223 89 0 chr2 44000827 44000939 -206686915 + FLAM_C SINE Alu 1 122 -21 21 0 0 0 chr2 44000939 44000960 -206686894 + AT_rich Low_complexity Low_complexity 1 21 0 1695 152 70 4 chr2 44001036 44001306 -206686548 + AluJo SINE Alu 7 294 -18 1688 160 32 7 chr2 44001312 44001593 -206686261 + AluJo SINE Alu 1 288 -24 270 0 0 0 chr2 44001593 44001623 -206686231 + (TG)n Simple_repeat Simple_repeat 2 31 0 2253 166 111 2 chr2 44001631 44002100 -206685754 + L1MB7 LINE L1 5665 6184 0 243 160 93 40 chr2 44002096 44002171 -206685683 + L1ME LINE L1 5814 5892 -272 * 1027 181 0 11 chr2 44002175 44002352 -206685502 + AluJb SINE Alu 137 311 -1 632 328 48 0 chr2 44002369 44002671 -206685183 + L1ME LINE L1 5447 5777 -385 1863 138 4 4 chr2 44002941 44003217 -206684637 - AluSx SINE Alu -16 296 21 386 169 8 0 chr2 44003223 44003341 -206684513 + (TA)n Simple_repeat Simple_repeat 2 120 0 2460 62 17 0 chr2 44003341 44003633 -206684221 - AluY SINE Alu -14 297 1 2226 114 7 0 chr2 44003781 44004087 -206683767 - AluSx SINE Alu -4 308 1 1941 91 0 0 chr2 44004307 44004549 -206683305 + AluSx SINE Alu 1 242 -70 2329 98 3 0 chr2 44004683 44004979 -206682875 + AluSx SINE Alu 1 297 -15 322 186 179 21 chr2 44004999 44005144 -206682710 - Charlie2 DNA MER1_type -202 2660 2493 218 216 186 82 chr2 44005398 44005495 -206682359 + L2 LINE L2 3161 3267 -5 304 162 114 48 chr2 44005520 44005625 -206682229 - Charlie2 DNA MER1_type -351 2511 2400 822 154 8 0 chr2 44005638 44005761 -206682093 + FRAM SINE Alu 23 146 -30 1046 91 0 21 chr2 44005761 44005904 -206681950 - AluSg/x SINE Alu -10 302 163 2059 147 0 0 chr2 44006011 44006304 -206681550 - AluSx SINE Alu -19 293 1 401 250 83 15 chr2 44006348 44006480 -206681374 + MLT1A1 LTR MaLR 225 365 0 2336 108 0 0 chr2 44006620 44006925 -206680929 - AluSg SINE Alu -5 305 1 2480 78 0 0 chr2 44006935 44007230 -206680624 - AluY SINE Alu -16 295 1 1987 155 3 0 chr2 44007403 44007706 -206680148 + AluSx SINE Alu 1 304 -8 2207 78 36 39 chr2 44008255 44008563 -206679291 - AluSq SINE Alu -6 307 1 251 73 49 0 chr2 44008663 44008704 -206679150 + T-rich Low_complexity Low_complexity 2 44 0 305 117 0 100 chr2 44008704 44008726 -206679128 - MER41B LTR ERV1 -101 534 511 2489 68 3 0 chr2 44008726 44009034 -206678820 + AluY SINE Alu 1 309 -2 305 117 0 100 chr2 44009034 44009071 -206678783 - MER41B LTR ERV1 -124 511 481 238 233 27 0 chr2 44009072 44009145 -206678709 + Charlie5 DNA MER1_type 2491 2565 -47 2147 105 26 3 chr2 44009489 44009794 -206678060 + AluSq SINE Alu 1 312 -1 252 186 0 0 chr2 44009809 44009868 -206677986 - MLT1J LTR MaLR -37 474 416 364 189 0 27 chr2 44009878 44009952 -206677902 + MLT1J LTR MaLR 426 497 -14 783 158 8 0 chr2 44009970 44010097 -206677757 - FLAM_C SINE Alu -5 128 1 283 228 109 20 chr2 44010104 44010205 -206677649 + MLT1J LTR MaLR 278 387 -124 2394 79 7 0 chr2 44010279 44010569 -206677285 + AluSx SINE Alu 1 292 -20 514 167 250 0 chr2 44010593 44010701 -206677153 - AluJb SINE Alu -177 135 1 624 249 50 13 chr2 44010706 44010905 -206676949 - MLT1J LTR MaLR -292 219 18 1810 169 7 3 chr2 44011011 44011307 -206676547 + AluJo SINE Alu 1 297 -15 2355 112 0 3 chr2 44011366 44011679 -206676175 + AluSp SINE Alu 1 312 -1 2580 60 0 0 chr2 44011752 44012052 -206675802 + AluY SINE Alu 1 300 -11 942 274 43 87 chr2 44012341 44012456 -206675398 + L1MC4 LINE L1 7449 7567 -475 2349 109 0 3 chr2 44012456 44012769 -206675085 + AluSq SINE Alu 1 312 -1 942 274 43 87 chr2 44012769 44013125 -206674729 + L1MC4 LINE L1 7567 7889 -153 2384 83 0 3 chr2 44013125 44013426 -206674428 + AluY SINE Alu 1 300 -11 942 274 43 87 chr2 44013426 44013574 -206674280 + L1MC4 LINE L1 7889 8042 0 2217 121 0 9 chr2 44013600 44013915 -206673939 + AluSx SINE Alu 1 312 0 2733 29 6 0 chr2 44013933 44014246 -206673608 - AluYb8 SINE Alu -3 315 1 2523 91 27 19 chr2 44014368 44014740 -206673114 - THE1C LTR MaLR 0 375 1 1904 143 34 3 chr2 44014750 44015043 -206672811 - AluJo SINE Alu -8 304 3 1881 148 10 7 chr2 44015343 44015633 -206672221 - AluJo SINE Alu -10 302 12 2093 142 0 10 chr2 44015725 44016034 -206671820 + AluJo SINE Alu 1 306 -6 1739 153 60 131 chr2 44016110 44016205 -206671649 + MER47B DNA MER2_type 1 101 -2222 2433 74 7 0 chr2 44016205 44016503 -206671351 - AluSp SINE Alu -13 300 1 1739 153 60 131 chr2 44016503 44016857 -206670997 + MER47B DNA MER2_type 101 418 0 378 80 0 0 chr2 44017573 44017623 -206670231 - MLT2A1 LTR ERVL 0 444 395 605 169 77 87 chr2 44017624 44018128 -206669726 - Ricksha DNA DNA -1668 378 186 930 72 12 90 chr2 44017658 44017718 -206670136 - HERVL LTR ERVL -1 5653 5590 2023 128 0 17 chr2 44017718 44018029 -206669825 - AluSx SINE Alu 0 306 1 930 72 12 90 chr2 44018029 44018134 -206669720 - HERVL LTR ERVL -64 5590 5500 1392 147 5 5 chr2 44018135 44018353 -206669501 - LTR26E LTR ERV1 -129 493 276 2329 95 0 0 chr2 44018353 44018648 -206669206 - AluSg SINE Alu -15 295 1 1424 174 46 49 chr2 44018653 44018958 -206668896 - AluJo SINE Alu -8 304 1 21 0 0 0 chr2 44019002 44019023 -206668831 + AT_rich Low_complexity Low_complexity 1 21 0 459 148 0 34 chr2 44019023 44019111 -206668743 - FLAM_A SINE Alu -6 136 52 1355 145 14 82 chr2 44019111 44019338 -206668516 + MER41D LTR ERV1 3 209 -348 2272 114 0 19 chr2 44019338 44019654 -206668200 + AluSg SINE Alu 1 310 0 1355 145 14 82 chr2 44019654 44019708 -206668146 + MER41D LTR ERV1 209 265 -292 703 128 14 108 chr2 44019710 44019858 -206667996 - FLAM_C SINE Alu -8 135 2 1389 99 10 15 chr2 44019894 44020096 -206667758 - LTR26B LTR ERV1 -330 201 1 2152 139 0 7 chr2 44020270 44020579 -206667275 + AluJb SINE Alu 3 309 -3 212 245 277 0 chr2 44020762 44020856 -206666998 + MIR SINE MIR 125 244 -18 335 235 24 12 chr2 44022239 44022324 -206665530 - MER5A DNA MER1_type -37 152 67 2062 110 80 28 chr2 44022347 44022513 -206665341 - MER57B LTR ERV1 -51 383 227 2128 101 0 10 chr2 44022513 44022801 -206665053 - AluSx SINE Alu -25 287 3 2062 110 80 28 chr2 44022801 44022997 -206664857 - MER57B LTR ERV1 -207 227 2 1076 115 0 0 chr2 44023028 44023176 -206664678 - MER57B LTR ERV1 -284 150 3 336 219 123 0 chr2 44023282 44023355 -206664499 + MER44D DNA MER2_type 1 82 -623 1954 139 0 3 chr2 44023355 44023642 -206664212 + AluSx SINE Alu 1 286 -26 1857 143 0 36 chr2 44023682 44023983 -206663871 + AluJb SINE Alu 1 290 -22 578 0 49 0 chr2 44023983 44024065 -206663789 + (TA)n Simple_repeat Simple_repeat 2 87 0 2259 85 7 0 chr2 44024068 44024350 -206663504 + AluSp SINE Alu 4 287 -26 696 87 78 6 chr2 44024350 44024886 -206662968 + (TA)n Simple_repeat Simple_repeat 1 574 0 21 0 0 0 chr2 44024886 44024907 -206662947 + AT_rich Low_complexity Low_complexity 1 21 0 4001 143 16 51 chr2 44024909 44025595 -206662259 + MER44D DNA MER2_type 72 605 0 2038 105 3 31 chr2 44025932 44026218 -206661636 + AluSx SINE Alu 1 278 -34 369 0 0 0 chr2 44026220 44026261 -206661593 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 1994 144 0 0 chr2 44026351 44026657 -206661197 - AluSx SINE Alu 0 312 7 665 275 100 32 chr2 44026663 44026914 -206660940 - L2 LINE L2 -18 3295 3028 2091 74 42 3 chr2 44026914 44027198 -206660656 - AluSc SINE Alu -14 295 1 633 135 10 0 chr2 44027200 44027296 -206660558 - AluJo/FLAM SINE Alu -181 131 35 368 188 125 62 chr2 44027340 44027468 -206660386 - L2 LINE L2 -361 2952 2817 657 216 12 36 chr2 44027648 44027815 -206660039 + FRAM SINE Alu 4 166 0 2167 96 0 16 chr2 44027842 44028155 -206659699 + AluSc SINE Alu 1 308 -1 1284 181 39 62 chr2 44028167 44028316 -206659538 + AluJo SINE Alu 1 152 -203 2334 58 3 0 chr2 44028316 44028611 -206659243 + AluY SINE Alu 1 296 -15 1284 181 39 62 chr2 44028611 44028626 -206659228 + AluJo SINE Alu 152 166 -189 2243 88 3 0 chr2 44028626 44028920 -206658934 + AluSp SINE Alu 1 295 -18 1284 181 39 62 chr2 44028920 44029116 -206658738 + AluJo SINE Alu 166 355 0 2130 116 0 0 chr2 44029127 44029428 -206658426 + AluSx SINE Alu 4 304 -8 1505 121 0 13 chr2 44030078 44030310 -206657544 + AluSq SINE Alu 38 266 -47 2224 81 30 0 chr2 44030354 44030650 -206657204 + AluSp SINE Alu 1 305 -8 2198 90 0 26 chr2 44030651 44030962 -206656892 + AluY SINE Alu 1 303 -8 2108 107 0 0 chr2 44030962 44031288 -206656566 + AluSx SINE Alu 1 326 0 884 98 0 0 chr2 44032270 44032393 -206655461 + AluSg/x SINE Alu 138 260 -52 478 75 0 85 chr2 44032395 44032489 -206655365 + Alu SINE Alu 224 309 0 854 268 38 55 chr2 44033252 44033369 -206654485 + L2 LINE L2 1996 2114 -1200 361 206 123 112 chr2 44033369 44033411 -206654443 + MER5B DNA MER1_type 4 44 -134 2035 100 10 35 chr2 44033411 44033722 -206654132 - AluSp SINE Alu -10 303 1 1773 115 27 24 chr2 44033732 44034027 -206653827 - AluSx SINE Alu -16 296 1 361 206 123 112 chr2 44034027 44034143 -206653711 + MER5B DNA MER1_type 52 175 -3 854 268 38 55 chr2 44034143 44034368 -206653486 + L2 LINE L2 2114 2332 -982 2235 100 0 0 chr2 44034392 44034692 -206653162 + AluSx SINE Alu 1 300 -12 335 320 112 34 chr2 44034705 44034769 -206653085 + L2 LINE L2 2480 2538 -776 2069 79 9 70 chr2 44034769 44035085 -206652769 + AluSp SINE Alu 1 297 -16 335 320 112 34 chr2 44035085 44035226 -206652628 + L2 LINE L2 2538 2701 -613 27 0 0 0 chr2 44035226 44035253 -206652601 + AT_rich Low_complexity Low_complexity 1 27 0 1346 103 61 5 chr2 44035269 44035482 -206652372 - AluSx SINE Alu -87 225 1 1327 108 5 0 chr2 44035634 44035820 -206652034 + AluSg/x SINE Alu 112 298 -12 242 262 0 16 chr2 44035833 44035894 -206651960 + L2 LINE L2 2480 2539 -775 644 106 0 4 chr2 44035898 44036134 -206651720 + AluSx SINE Alu 2 323 0 1986 119 0 7 chr2 44036166 44036461 -206651393 + AluSx SINE Alu 6 298 -14 500 316 140 7 chr2 44036477 44036779 -206651075 + L2 LINE L2 2722 3059 -254 2341 90 0 0 chr2 44036851 44037161 -206650693 - AluSx SINE Alu -2 310 1 1443 205 115 41 chr2 44037424 44037859 -206649995 - MLT1C LTR MaLR 0 467 1 327 285 157 48 chr2 44038309 44038769 -206649085 + L2 LINE L2 2243 2752 -562 1518 109 38 0 chr2 44038782 44038993 -206648861 - AluSx SINE Alu -87 225 7 2098 113 3 0 chr2 44039003 44039304 -206648550 - AluY SINE Alu -9 302 1 537 16 0 0 chr2 44039315 44039377 -206648477 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 2029 86 14 4 chr2 44039381 44039659 -206648195 - AluSq SINE Alu -32 281 1 2151 102 0 3 chr2 44040321 44040614 -206647240 - AluSg SINE Alu -18 292 1 1386 167 92 27 chr2 44040713 44041006 -206646848 - AluJb SINE Alu 0 312 1 395 275 92 44 chr2 44041203 44041261 -206646593 - MIR SINE MIR -8 254 200 2037 108 3 17 chr2 44041261 44041556 -206646298 + AluSq SINE Alu 1 291 -22 395 275 92 44 chr2 44041556 44041726 -206646128 - MIR SINE MIR -62 200 15 199 271 76 76 chr2 44042377 44042495 -206645359 + MIR SINE MIR 8 125 -137 294 236 104 19 chr2 44042739 44042845 -206645009 - MIR SINE MIR -50 212 98 23 0 0 0 chr2 44042854 44042877 -206644977 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr2 44044228 44044276 -206643578 + GC_rich Low_complexity Low_complexity 1 48 0 204 40 0 0 chr2 44044717 44044742 -206643112 + (TGGGGG)n Simple_repeat Simple_repeat 3 27 0 29 0 0 0 chr2 44046050 44046079 -206641775 + AT_rich Low_complexity Low_complexity 1 29 0 684 155 9 0 chr2 44046106 44046222 -206641632 + FLAM_C SINE Alu 1 117 -16 28 29 0 0 chr2 44046222 44046257 -206641597 + AT_rich Low_complexity Low_complexity 1 35 0 2258 87 6 6 chr2 44046257 44046569 -206641285 + AluSp SINE Alu 1 312 -1 1961 103 40 20 chr2 44046639 44046939 -206640915 + AluSx SINE Alu 1 306 -6 2304 81 3 0 chr2 44047194 44047491 -206640363 + AluSp SINE Alu 1 298 -15 2199 76 7 7 chr2 44047524 44047815 -206640039 + AluY SINE Alu 1 291 -20 1519 170 54 0 chr2 44047838 44048114 -206639740 + AluJb SINE Alu 9 299 -13 2025 135 0 3 chr2 44048244 44048556 -206639298 - AluSq SINE Alu -2 311 1 931 167 0 7 chr2 44048892 44049042 -206638812 - AluJo/FRAM SINE Alu -30 282 134 2079 112 3 0 chr2 44049042 44049337 -206638517 - AluSx SINE Alu -15 297 2 213 39 0 0 chr2 44049339 44049365 -206638489 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 1982 68 60 0 chr2 44049365 44049511 -206638343 - AluY SINE Alu -30 281 145 275 0 29 0 chr2 44049511 44049546 -206638308 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1982 68 60 0 chr2 44049546 44049664 -206638190 - AluY SINE Alu -166 145 1 2081 96 31 0 chr2 44049664 44049954 -206637900 - AluSp SINE Alu -13 300 1 1667 109 51 12 chr2 44049998 44050254 -206637600 - AluSq SINE Alu -47 266 1 659 168 26 0 chr2 44050254 44050367 -206637487 - AluJo SINE Alu -176 136 21 197 260 8 110 chr2 44050580 44050707 -206637147 + L2 LINE L2 2791 2904 -410 590 215 103 51 chr2 44050736 44050950 -206636904 + L2 LINE L2 3089 3313 0 250 281 34 11 chr2 44051012 44051101 -206636753 - L2 LINE L2 0 3313 3223 634 327 27 64 chr2 44051593 44051923 -206635931 - L2 LINE L2 -4 3268 2951 1167 203 6 84 chr2 44052014 44052147 -206635707 + AluJo SINE Alu 4 146 -156 2039 118 20 0 chr2 44052147 44052452 -206635402 + AluSx SINE Alu 1 311 -1 1167 203 6 84 chr2 44052452 44052634 -206635220 + AluJo SINE Alu 142 295 -3 261 0 0 0 chr2 44052634 44052663 -206635191 + (TA)n Simple_repeat Simple_repeat 2 30 0 280 250 102 23 chr2 44052685 44052773 -206635081 - MER5C DNA MER1_type -225 99 5 2212 98 0 0 chr2 44053012 44053307 -206634547 - AluSg SINE Alu -15 295 1 210 192 0 0 chr2 44054906 44054958 -206632896 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 851 193 6 0 chr2 44054958 44055119 -206632735 - AluJo SINE Alu -14 298 137 742 146 15 31 chr2 44055248 44055378 -206632476 - AluJo SINE Alu -174 128 1 1400 162 0 126 chr2 44055475 44055809 -206632045 - AluJb SINE Alu -10 292 1 288 154 0 0 chr2 44055812 44055864 -206631990 - L1PA11 LINE L1 -6 6168 6117 305 57 0 38 chr2 44055864 44055917 -206631937 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1864 116 0 0 chr2 44055917 44056176 -206631678 - AluSg SINE Alu -29 281 23 1702 115 29 0 chr2 44056176 44056417 -206631437 - AluSx SINE Alu -62 250 1 407 167 167 0 chr2 44056800 44056878 -206630976 - AluJ/FLAM SINE Alu -219 93 3 1622 167 0 41 chr2 44056889 44057207 -206630647 - AluJo SINE Alu -3 309 5 1956 104 59 0 chr2 44057288 44057577 -206630277 - AluSp SINE Alu -6 307 2 2333 60 0 3 chr2 44057588 44057886 -206629968 - AluY SINE Alu -14 297 1 668 178 0 39 chr2 44058035 44058164 -206629690 + FLAM_C SINE Alu 2 125 -18 273 259 104 44 chr2 44058440 44058575 -206629279 + MIR SINE MIR 25 167 -95 1842 139 17 7 chr2 44059069 44059363 -206628491 - AluSx SINE Alu -15 297 1 2009 108 7 7 chr2 44059374 44059670 -206628184 - AluSp SINE Alu -13 300 5 396 268 93 29 chr2 44059698 44059903 -206627951 - L1MC5 LINE L1 -36 7925 7708 541 185 57 38 chr2 44059912 44060069 -206627785 - L1MC4 LINE L1 -17 8025 7866 246 103 0 0 chr2 44060078 44060117 -206627737 - Alu SINE Alu -7 293 255 1270 159 0 66 chr2 44060142 44060413 -206627441 + AluJo SINE Alu 30 282 -30 1017 101 0 0 chr2 44060468 44060606 -206627248 - AluSg/x SINE Alu -16 296 159 2192 66 11 3 chr2 44060632 44060919 -206626935 - AluSp SINE Alu -24 289 1 1958 121 10 0 chr2 44061000 44061289 -206626565 - AluSx SINE Alu -4 308 17 599 225 0 29 chr2 44061347 44061485 -206626369 + FRAM SINE Alu 26 159 -17 1818 152 34 0 chr2 44061532 44061829 -206626025 + AluSq SINE Alu 1 307 -6 771 150 8 0 chr2 44061833 44061953 -206625901 + FLAM_C SINE Alu 1 121 -12 703 108 7 7 chr2 44062006 44062145 -206625709 + (CA)n Simple_repeat Simple_repeat 2 140 0 1536 150 55 46 chr2 44062150 44062271 -206625583 + AluSx SINE Alu 1 119 -193 2270 92 0 0 chr2 44062271 44062564 -206625290 + AluSc SINE Alu 1 293 -16 1536 150 55 46 chr2 44062564 44062749 -206625105 + AluSx SINE Alu 119 310 -2 531 138 92 0 chr2 44062759 44062846 -206625008 + AluJb SINE Alu 194 288 -24 1543 164 7 21 chr2 44063125 44063412 -206624442 - AluSx SINE Alu -11 301 19 1191 199 78 152 chr2 44063423 44064219 -206623635 - Charlie2a DNA MER1_type -348 2514 1778 247 219 12 12 chr2 44064274 44064356 -206623498 + (TA)n Simple_repeat Simple_repeat 1 82 0 1237 183 155 34 chr2 44064363 44064686 -206623168 - MLT2C1 LTR ERVL -33 364 3 281 149 30 45 chr2 44064688 44064755 -206623099 - Charlie2a DNA MER1_type -1087 1775 1710 21 0 0 0 chr2 44064846 44064867 -206622987 + AT_rich Low_complexity Low_complexity 1 21 0 718 212 25 30 chr2 44064870 44065068 -206622786 - Charlie2a DNA MER1_type -1206 1656 1460 1370 134 5 0 chr2 44065086 44065295 -206622559 - AluSg/x SINE Alu -17 293 84 617 210 164 96 chr2 44065295 44065648 -206622206 - Charlie2a DNA MER1_type -2377 405 29 2248 149 53 19 chr2 44065698 44066114 -206621740 + MSTB1 LTR MaLR 1 430 -2 1698 124 0 16 chr2 44066142 44066400 -206621454 - AluSx SINE Alu -9 303 50 3701 128 42 6 chr2 44066541 44067168 -206620686 - Tigger3(Golem) DNA MER2_type -1 3028 2380 2094 111 10 0 chr2 44067168 44067474 -206620380 - AluSg SINE Alu -1 309 1 242 274 32 21 chr2 44067613 44067708 -206620146 + L1M4 LINE L1 4822 4917 -1229 1354 234 97 35 chr2 44067723 44068154 -206619700 + LTR32 LTR ERVL 14 471 0 296 204 111 76 chr2 44068188 44068329 -206619525 - L1MC5 LINE L1 -465 7496 7346 1767 89 32 76 chr2 44068329 44068644 -206619210 - AluSx SINE Alu -11 301 1 296 204 111 76 chr2 44068644 44068674 -206619180 - L1MC5 LINE L1 -615 7346 7319 2020 114 9 22 chr2 44068876 44069257 -206618597 - AluSq SINE Alu 0 377 1 346 183 98 0 chr2 44069291 44069373 -206618481 - MER20B DNA MER1_type 0 783 694 493 296 41 27 chr2 44069385 44069605 -206618249 - HAL1 LINE L1 -889 1618 1396 2329 83 0 10 chr2 44070147 44070460 -206617394 - AluSg SINE Alu 0 310 1 213 108 0 0 chr2 44070494 44070531 -206617323 + (CA)n Simple_repeat Simple_repeat 2 38 0 1195 205 4 15 chr2 44070744 44071007 -206616847 + AluJo SINE Alu 37 296 -16 186 43 0 0 chr2 44071013 44071036 -206616818 + (TAGA)n Simple_repeat Simple_repeat 2 24 0 422 222 100 0 chr2 44071037 44071127 -206616727 - FLAM_A SINE Alu -26 116 18 1702 151 0 4 chr2 44071416 44071681 -206616173 - AluJo SINE Alu -36 276 13 1813 136 10 14 chr2 44071757 44072072 -206615782 + AluSx SINE Alu 1 312 0 1368 101 58 19 chr2 44072386 44072644 -206615210 - SVA Other Other -1116 270 3 1366 150 135 0 chr2 44072904 44073170 -206614684 - AluJo SINE Alu -10 302 1 1836 103 0 0 chr2 44073241 44073484 -206614370 + AluSx SINE Alu 47 289 -23 1824 151 3 3 chr2 44074127 44074419 -206613435 + AluSx SINE Alu 1 292 -20 1958 131 3 3 chr2 44074558 44074856 -206612998 - AluSx SINE Alu -13 299 2 373 205 0 0 chr2 44075247 44075325 -206612529 - MER103 DNA DNA -51 115 38 1955 131 7 10 chr2 44075342 44075648 -206612206 + AluSx SINE Alu 1 305 -7 244 232 58 29 chr2 44075952 44076021 -206611833 + LTR8A LTR ERV1 593 663 -64 906 158 23 11 chr2 44076121 44076298 -206611556 - AluSc SINE Alu -130 179 1 927 251 19 19 chr2 44076299 44076562 -206611292 - L1MEc LINE L1 -5633 763 501 678 234 0 0 chr2 44076654 44076778 -206611076 - FLAM_A SINE Alu -6 127 4 1554 158 0 82 chr2 44076784 44076955 -206610899 - AluSx SINE Alu -22 290 155 1926 132 0 4 chr2 44076955 44077227 -206610627 - AluSx SINE Alu -33 279 9 1554 158 0 82 chr2 44077227 44077371 -206610483 - AluSx SINE Alu -157 155 1 1161 205 56 46 chr2 44077381 44077684 -206610170 - L1ME LINE L1 -401 5763 5458 309 263 12 12 chr2 44077722 44077802 -206610052 + MER81 DNA DNA 1 80 -34 22 35 0 0 chr2 44078191 44078220 -206609634 + AT_rich Low_complexity Low_complexity 1 29 0 2053 103 30 0 chr2 44078840 44079141 -206608713 - AluY SINE Alu -1 310 1 2292 96 0 3 chr2 44079142 44079434 -206608420 - AluSq SINE Alu -21 292 2 3594 35 0 23 chr2 44079669 44080098 -206607756 - SVA Other Other 0 1386 968 192 348 51 51 chr2 44080565 44080683 -206607171 - MIR SINE MIR -137 125 8 321 283 73 51 chr2 44081334 44081504 -206606350 + MIR SINE MIR 15 191 -71 2080 112 3 20 chr2 44081504 44081800 -206606054 - AluSq SINE Alu -22 291 1 2182 104 30 0 chr2 44081882 44082181 -206605673 - AluY SINE Alu -3 308 1 208 268 14 14 chr2 44082271 44082342 -206605512 - MIR3 SINE MIR -9 199 129 2073 75 27 30 chr2 44083125 44083420 -206604434 + AluY SINE Alu 3 296 -15 2326 97 0 7 chr2 44083730 44084039 -206603815 + AluY SINE Alu 1 307 -4 931 159 0 12 chr2 44084255 44084418 -206603436 + AluJb SINE Alu 129 289 -23 1791 132 15 7 chr2 44084422 44084695 -206603159 - Tigger3b DNA MER2_type -661 570 296 2136 112 0 7 chr2 44084695 44084991 -206602863 + AluSx SINE Alu 1 294 -18 835 230 17 17 chr2 44085012 44085190 -206602664 + AluJb SINE Alu 118 295 -17 1484 189 39 4 chr2 44085190 44085470 -206602384 - Tigger3b DNA MER2_type -940 291 2 488 164 48 39 chr2 44085548 44085652 -206602202 + FAM SINE Alu 65 169 -16 331 277 62 18 chr2 44085653 44085765 -206602089 - L1MC/D LINE L1 -2195 5613 5497 2038 120 41 0 chr2 44085778 44086069 -206601785 - AluSx SINE Alu -9 303 1 2066 119 38 3 chr2 44086071 44086364 -206601490 - AluSx SINE Alu -9 303 1 2207 97 0 13 chr2 44086418 44086717 -206601137 - AluSg SINE Alu -15 295 1 2052 137 0 16 chr2 44086856 44087162 -206600692 - AluSx SINE Alu -11 301 1 1503 164 31 17 chr2 44087187 44087480 -206600374 - AluJo SINE Alu -1 311 15 2011 123 7 7 chr2 44088034 44088335 -206599519 - AluSx SINE Alu -11 301 1 2076 109 24 3 chr2 44088933 44089226 -206598628 + AluSq SINE Alu 1 299 -14 479 153 0 12 chr2 44089252 44089337 -206598517 - L1MC4 LINE L1 -37 8005 7922 1072 135 107 10 chr2 44089342 44089691 -206598163 - LTR54 LTR ERV1 0 510 8 180 0 0 0 chr2 44089695 44089715 -206598139 + (TA)n Simple_repeat Simple_repeat 1 20 0 1590 220 8 38 chr2 44089716 44090111 -206597743 - L1MC4 LINE L1 -147 7895 7513 452 263 161 41 chr2 44090149 44090658 -206597196 - L1M4 LINE L1 -2702 3444 2875 724 168 0 77 chr2 44091165 44091308 -206596546 + FLAM_A SINE Alu 1 132 -1 2190 121 6 10 chr2 44091310 44091623 -206596231 + AluSx SINE Alu 1 312 0 985 171 17 11 chr2 44091795 44091976 -206595878 - AluSg/x SINE Alu -12 300 119 1069 173 0 25 chr2 44092325 44092527 -206595327 + AluJb SINE Alu 100 296 -16 2412 92 0 0 chr2 44092532 44092836 -206595018 + AluSg SINE Alu 5 308 -2 804 171 0 0 chr2 44092848 44092971 -206594883 + AluJb SINE Alu 2 124 -188 26 0 0 0 chr2 44092971 44092997 -206594857 + AT_rich Low_complexity Low_complexity 1 26 0 1887 133 3 27 chr2 44093000 44093300 -206594554 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr2 44094449 44094472 -206593382 + AT_rich Low_complexity Low_complexity 1 23 0 231 183 56 42 chr2 44094732 44094803 -206593051 + L1ME LINE L1 5318 5389 -2419 2290 97 3 3 chr2 44094803 44095113 -206592741 + AluY SINE Alu 2 311 0 2019 131 3 0 chr2 44095174 44095465 -206592389 + AluSx SINE Alu 8 299 -13 24 0 0 0 chr2 44095492 44095516 -206592338 + AT_rich Low_complexity Low_complexity 1 24 0 1979 120 10 19 chr2 44095758 44096066 -206591788 - AluSc SINE Alu -4 305 1 2436 80 0 3 chr2 44096121 44096433 -206591421 - AluY SINE Alu 0 311 1 2134 102 3 20 chr2 44096473 44096778 -206591076 - AluSx SINE Alu -12 300 1 1991 151 0 19 chr2 44096980 44097298 -206590556 - AluJb SINE Alu 0 312 1 323 318 0 0 chr2 44097667 44097777 -206590077 + L1ME LINE L1 5606 5715 -406 1693 113 140 0 chr2 44097943 44098208 -206589646 + AluSq SINE Alu 1 302 -11 28 0 0 0 chr2 44098346 44098374 -206589480 + AT_rich Low_complexity Low_complexity 1 28 0 1265 191 70 33 chr2 44098374 44098646 -206589208 - AluJo SINE Alu -30 282 1 1709 182 0 10 chr2 44099020 44099322 -206588532 - AluJo SINE Alu -13 299 1 368 235 152 29 chr2 44099882 44100086 -206587768 + L1M4 LINE L1 4419 4647 -1499 1502 206 121 57 chr2 44100153 44100410 -206587444 + Charlie1a DNA MER1_type 40 279 -2482 564 186 62 0 chr2 44100410 44100523 -206587331 - L1MB5 LINE L1 -2 6172 6053 2154 120 10 3 chr2 44100531 44100831 -206587023 - AluSx SINE Alu -10 302 1 1502 206 121 57 chr2 44100831 44100905 -206586949 + Charlie1a DNA MER1_type 285 353 -2408 1626 210 0 3 chr2 44100905 44101205 -206586649 - AluJo SINE Alu -13 299 1 1502 206 121 57 chr2 44101205 44101352 -206586502 + Charlie1a DNA MER1_type 353 559 -896 718 199 105 66 chr2 44101376 44101400 -206586454 + Charlie1a DNA MER1_type 1133 1155 -1606 591 94 24 0 chr2 44101400 44101485 -206586369 + L1MA9 LINE L1 6219 6305 -7 718 199 105 66 chr2 44101485 44101544 -206586310 + Charlie1a DNA MER1_type 1155 1210 -1551 10297 51 59 6 chr2 44101544 44102850 -206585004 - SVA Other Other -2 1384 10 718 199 105 66 chr2 44102850 44103051 -206584803 + Charlie1a DNA MER1_type 1210 1429 -26 816 202 0 0 chr2 44103071 44103200 -206584654 - FLAM_C SINE Alu -4 129 1 276 269 56 62 chr2 44103251 44103411 -206584443 + L1M4 LINE L1 4685 4843 -1303 397 198 0 12 chr2 44103599 44103685 -206584169 - MIR SINE MIR 0 262 178 350 244 24 0 chr2 44104099 44104181 -206583673 - MIR SINE MIR -98 164 81 639 179 72 5 chr2 44104210 44104362 -206583492 + L1MB3 LINE L1 5652 5815 -368 830 152 7 41 chr2 44104362 44104507 -206583347 + FRAM SINE Alu 1 138 -38 393 22 0 0 chr2 44104510 44104556 -206583298 + (TC)n Simple_repeat Simple_repeat 2 47 0 351 0 0 0 chr2 44104558 44104597 -206583257 + (CA)n Simple_repeat Simple_repeat 2 40 0 1324 150 113 30 chr2 44104603 44104903 -206582951 + L1MB3 LINE L1 5816 6140 -43 23 0 0 0 chr2 44104912 44104935 -206582919 + AT_rich Low_complexity Low_complexity 1 23 0 697 216 0 24 chr2 44104957 44105082 -206582772 + FLAM_A SINE Alu 1 122 -11 441 234 9 37 chr2 44105325 44105432 -206582422 - L2 LINE L2 0 3272 3169 2426 80 0 0 chr2 44105869 44106171 -206581683 - AluY SINE Alu -9 302 1 220 351 79 35 chr2 44106270 44106384 -206581470 + MIR SINE MIR 23 141 -67 2110 115 24 0 chr2 44106754 44107049 -206580805 - AluSg SINE Alu -8 302 1 1178 82 22 43 chr2 44107516 44107700 -206580154 + AluSq SINE Alu 132 311 -2 1313 210 95 0 chr2 44108407 44108551 -206579303 - AluJo SINE Alu -25 287 158 180 0 0 0 chr2 44108551 44108571 -206579283 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 1313 210 95 0 chr2 44108571 44108688 -206579166 - AluJo SINE Alu -154 158 1 2388 77 3 3 chr2 44109137 44109434 -206578420 + AluSg SINE Alu 1 297 -13 451 265 77 33 chr2 44109536 44109808 -206578046 + L1ME LINE L1 4767 5050 -1096 28 0 0 0 chr2 44109819 44109847 -206578007 + AT_rich Low_complexity Low_complexity 1 28 0 270 317 41 78 chr2 44109849 44110092 -206577762 + L1ME LINE L1 5638 5871 -299 1647 137 3 32 chr2 44110632 44110916 -206576938 - AluJb SINE Alu -2 310 35 693 161 0 57 chr2 44111183 44111307 -206576547 + FLAM_C SINE Alu 2 118 -25 201 240 92 0 chr2 44111473 44111547 -206576307 + MIR SINE MIR 93 172 -63 2087 103 10 7 chr2 44111780 44112071 -206575783 + AluSg SINE Alu 1 292 -18 691 178 31 8 chr2 44112424 44112553 -206575301 - AluSq/x SINE Alu -179 133 2 2000 122 7 0 chr2 44112570 44112856 -206574998 - AluSg SINE Alu -21 289 2 2042 125 0 14 chr2 44112882 44113210 -206574644 - AluSq SINE Alu 0 324 1 2104 115 0 3 chr2 44113769 44114055 -206573799 - AluSg SINE Alu -24 286 2 22 0 0 0 chr2 44114115 44114137 -206573717 + AT_rich Low_complexity Low_complexity 1 22 0 2482 196 115 35 chr2 44114142 44114463 -206573391 - LTR26E LTR ERV1 0 622 328 1936 125 21 10 chr2 44114463 44114752 -206573102 - AluSx SINE Alu -19 293 2 2482 196 115 35 chr2 44114752 44115006 -206572848 - LTR26E LTR ERV1 -294 328 1 529 214 149 6 chr2 44115236 44115404 -206572450 - L1MC4a LINE L1 -1944 5864 5673 1460 133 9 120 chr2 44116191 44116368 -206571486 - L1MA2 LINE L1 0 6304 6109 1897 160 0 0 chr2 44116368 44116668 -206571186 - AluSq SINE Alu -13 300 1 1460 133 9 120 chr2 44116668 44116770 -206571084 - L1MA2 LINE L1 -195 6109 6061 2294 74 7 7 chr2 44116770 44117068 -206570786 - AluY SINE Alu -13 298 1 1460 133 9 120 chr2 44117068 44117103 -206570751 - L1MA2 LINE L1 -243 6061 6024 2089 111 0 52 chr2 44117660 44117967 -206569887 + AluSc SINE Alu 1 291 -18 1832 157 18 0 chr2 44117979 44118265 -206569589 + AluJb SINE Alu 1 291 -21 2487 31 17 10 chr2 44118287 44118580 -206569274 + AluY SINE Alu 1 295 -16 1117 172 37 19 chr2 44118664 44118879 -206568975 + MER20 DNA MER1_type 1 219 0 1982 133 95 17 chr2 44118975 44119321 -206568533 - THE1C LTR MaLR -2 373 1 26 30 0 0 chr2 44119330 44119363 -206568491 + AT_rich Low_complexity Low_complexity 1 33 0 254 205 0 36 chr2 44119616 44119699 -206568155 - HAL1 LINE L1 -417 2090 2011 403 251 114 54 chr2 44119719 44119886 -206567968 - HAL1 LINE L1 -855 1652 1476 2070 135 0 7 chr2 44120023 44120320 -206567534 + AluSx SINE Alu 1 295 -17 1852 151 7 13 chr2 44120442 44120746 -206567108 - AluSx SINE Alu -10 302 1 272 248 21 99 chr2 44120749 44120890 -206566964 - MER5A DNA MER1_type -1 188 59 1747 156 7 11 chr2 44120936 44121243 -206566611 + AluJo SINE Alu 1 306 0 2321 95 3 0 chr2 44121296 44121602 -206566252 - AluSg SINE Alu -3 307 1 501 128 163 0 chr2 44122638 44122724 -206565130 + HY3 scRNA scRNA 1 100 -1 1305 137 122 38 chr2 44123067 44123330 -206564524 - AluJo SINE Alu -13 299 15 22 0 0 0 chr2 44123567 44123589 -206564265 + AT_rich Low_complexity Low_complexity 1 22 0 1290 117 0 0 chr2 44123729 44123908 -206563946 - AluSg/x SINE Alu -3 309 131 1906 156 0 0 chr2 44125596 44125884 -206561970 - AluSx SINE Alu -24 288 1 180 0 0 0 chr2 44125886 44125906 -206561948 + (T)n Simple_repeat Simple_repeat 1 20 0 2023 105 0 67 chr2 44126243 44126556 -206561298 + AluSg SINE Alu 1 292 -18 980 138 0 20 chr2 44126564 44126716 -206561138 + L1PB4 LINE L1 6006 6154 -2 887 129 0 15 chr2 44127059 44127191 -206560663 + FLAM_C SINE Alu 9 138 -5 2282 104 3 0 chr2 44127322 44127621 -206560233 - AluSq SINE Alu -13 300 1 230 229 43 0 chr2 44128156 44128226 -206559628 + (TATG)n Simple_repeat Simple_repeat 1 73 0 26 0 0 0 chr2 44129058 44129084 -206558770 + AT_rich Low_complexity Low_complexity 1 26 0 608 152 9 9 chr2 44129084 44129189 -206558665 - FLAM_C SINE Alu -25 118 14 10779 118 34 58 chr2 44129224 44129805 -206558049 + Tigger1 DNA MER2_type 9 602 -1816 463 86 0 29 chr2 44129805 44129875 -206557979 + Alu SINE Alu 238 305 -7 10779 118 34 58 chr2 44129875 44129919 -206557935 + Tigger1 DNA MER2_type 602 646 -1772 1896 156 7 0 chr2 44129919 44130236 -206557618 + AluSx SINE Alu 1 319 0 10779 118 34 58 chr2 44130236 44131549 -206556305 + Tigger1 DNA MER2_type 646 1970 -448 2405 60 7 3 chr2 44131549 44131851 -206556003 + AluY SINE Alu 1 303 -8 10779 118 34 58 chr2 44131851 44131902 -206555952 + Tigger1 DNA MER2_type 1970 2021 -397 1785 136 18 14 chr2 44131905 44132185 -206555669 - AluSx SINE Alu -21 291 11 2206 108 0 7 chr2 44132513 44132809 -206555045 - AluSq SINE Alu -19 294 1 495 342 31 0 chr2 44133534 44133727 -206554127 + MIR SINE MIR 29 227 -35 2070 96 3 58 chr2 44133781 44134093 -206553761 + AluSx SINE Alu 1 295 -17 286 206 32 71 chr2 44134836 44134962 -206552892 + MER20 DNA MER1_type 7 127 -92 2202 82 38 3 chr2 44135100 44135392 -206552462 - AluY SINE Alu -5 306 5 3035 114 88 7 chr2 44135559 44136096 -206551758 - Tigger3(Golem) DNA MER2_type -2 3027 2448 1860 133 7 33 chr2 44136176 44136477 -206551377 + AluJb SINE Alu 2 294 -18 1961 95 60 11 chr2 44136479 44136764 -206551090 + AluSq SINE Alu 1 299 -14 740 176 52 150 chr2 44136782 44137163 -206550691 - LTR49 LTR ERV1 -245 350 7 706 168 0 8 chr2 44137193 44137312 -206550542 - FLAM_C SINE Alu -15 118 1 329 253 11 21 chr2 44137454 44137549 -206550305 - L1M4 LINE L1 -1981 4165 4072 22 0 0 0 chr2 44138579 44138601 -206549253 + AT_rich Low_complexity Low_complexity 1 22 0 190 293 20 101 chr2 44139028 44139127 -206548727 - L2 LINE L2 -33 3280 3190 1518 210 4 11 chr2 44139304 44139580 -206548274 - AluJb SINE Alu -38 274 1 2164 141 0 0 chr2 44140268 44140567 -206547287 - AluSx SINE Alu -13 299 1 361 292 76 21 chr2 44141479 44141623 -206546231 + L1ME2 LINE L1 5725 5876 -288 26 0 0 0 chr2 44141771 44141797 -206546057 + AT_rich Low_complexity Low_complexity 1 26 0 874 165 0 0 chr2 44142310 44142443 -206545411 + FLAM_C SINE Alu 1 133 0 2262 104 3 19 chr2 44142449 44142765 -206545089 + AluSx SINE Alu 1 311 -1 1679 265 136 8 chr2 44142773 44143434 -206544420 + L1ME3A LINE L1 5417 6162 -8 1836 147 0 71 chr2 44143465 44143791 -206544063 + AluJo SINE Alu 8 310 -2 2205 123 7 0 chr2 44144743 44145053 -206542801 - AluSx SINE Alu 0 312 1 1832 189 0 6 chr2 44145057 44145369 -206542485 - AluJo SINE Alu -2 310 1 287 149 14 68 chr2 44145455 44145529 -206542325 - LTR50 LTR ERVL -720 75 6 2157 115 3 0 chr2 44145665 44145961 -206541893 + AluSp SINE Alu 1 297 -16 280 149 21 0 chr2 44146336 44146383 -206541471 - Alu SINE Alu -254 48 1 394 143 0 0 chr2 44146646 44146709 -206541145 + Tigger5 DNA MER2_type 2237 2299 -24 851 309 129 5 chr2 44146785 44147157 -206540697 - LTR16A LTR ERVL -2 448 31 259 213 120 13 chr2 44147175 44147250 -206540604 - MLT1I LTR MaLR -46 363 281 * 272 263 163 19 chr2 44147222 44147526 -206540328 - MLT1H LTR MaLR -161 388 4 2362 93 0 10 chr2 44147810 44148122 -206539732 - AluSc SINE Alu 0 309 1 47 0 0 0 chr2 44148176 44148223 -206539631 + AT_rich Low_complexity Low_complexity 1 47 0 302 171 98 12 chr2 44148227 44148309 -206539545 - AluSg SINE Alu -211 89 1 2066 139 3 3 chr2 44148346 44148656 -206539198 - AluSg SINE Alu 0 310 1 476 237 114 41 chr2 44148674 44148893 -206538961 - L1ME3 LINE L1 -1 6161 5927 1972 164 0 0 chr2 44149705 44150003 -206537851 + AluJb SINE Alu 1 298 -14 1292 169 58 73 chr2 44150188 44150398 -206537456 - MER44D DNA MER2_type -1882 609 397 2307 77 27 61 chr2 44150398 44150554 -206537300 + THE1B LTR MaLR 3 163 -201 2107 124 3 7 chr2 44150554 44150860 -206536994 - AluSx SINE Alu -2 310 6 2307 77 27 61 chr2 44150860 44151078 -206536776 + THE1B LTR MaLR 163 364 0 1292 169 58 73 chr2 44151078 44151210 -206536644 - MER44D DNA MER2_type -2094 397 2 2117 117 37 0 chr2 44151551 44151850 -206536004 - AluSx SINE Alu -2 310 1 434 243 37 44 chr2 44152168 44152304 -206535550 - MIR SINE MIR -56 206 72 1425 178 53 18 chr2 44153980 44154261 -206533593 - AluJb SINE Alu -21 291 1 1765 159 10 10 chr2 44154725 44155021 -206532833 - AluJb SINE Alu -5 307 12 527 174 0 0 chr2 44155042 44155134 -206532720 + FRAM SINE Alu 77 168 -8 28 0 0 0 chr2 44155136 44155164 -206532690 + AT_rich Low_complexity Low_complexity 1 28 0 1401 157 81 4 chr2 44155171 44155407 -206532447 + AluJo SINE Alu 26 279 -33 24 91 0 0 chr2 44155466 44155532 -206532322 + AT_rich Low_complexity Low_complexity 1 66 0 1997 135 3 3 chr2 44156012 44156315 -206531539 + AluSg SINE Alu 1 303 -7 3291 124 56 2 chr2 44156622 44157121 -206530733 - MER1A DNA MER1_type -1 526 1 25 0 0 0 chr2 44157132 44157157 -206530697 + AT_rich Low_complexity Low_complexity 1 25 0 745 122 65 14 chr2 44157157 44157296 -206530558 - L1MA9 LINE L1 0 6312 6167 201 296 92 71 chr2 44157997 44158095 -206529759 - L2 LINE L2 -19 3253 3154 1864 210 30 74 chr2 44159531 44159625 -206528229 - L1ME1 LINE L1 -18 6148 6051 885 136 8 0 chr2 44159625 44159757 -206528097 + FLAM_C SINE Alu 1 133 0 2132 120 0 7 chr2 44159765 44160056 -206527798 + AluSx SINE Alu 3 291 -21 1973 144 0 26 chr2 44160057 44160362 -206527492 + AluSx SINE Alu 1 297 -15 1864 210 30 74 chr2 44160362 44160852 -206527002 - L1ME1 LINE L1 -121 6045 5579 857 245 22 24 chr2 44160854 44161244 -206526610 + MLT2F LTR ERVL 3 436 -227 273 171 0 0 chr2 44161245 44161300 -206526554 + L1MC/D LINE L1 5525 5582 -587 232 162 0 0 chr2 44161302 44161339 -206526515 - MLT2F LTR ERVL -2 661 625 1374 172 0 51 chr2 44161347 44161603 -206526251 - AluJo SINE Alu -68 244 2 603 219 61 15 chr2 44161606 44161878 -206525976 - L1M1 LINE L1 -743 5403 5204 * 1690 206 41 52 chr2 44161876 44162492 -206525362 - L1M4 LINE L1 -1827 4555 3947 1209 224 79 83 chr2 44162552 44163221 -206524633 - L1M4 LINE L1 -2414 3968 3301 755 198 5 86 chr2 44163221 44163408 -206524446 + FAM SINE Alu 3 174 -1 1209 224 79 83 chr2 44163408 44163461 -206524393 - L1M4 LINE L1 -3081 3301 3249 242 333 20 25 chr2 44163616 44163817 -206524037 - L1M4 LINE L1 -4883 1501 1302 390 124 0 174 chr2 44163835 44163901 -206523953 - L1MA2 LINE L1 0 6304 6267 2053 92 13 70 chr2 44163901 44164062 -206523792 - AluSc SINE Alu -13 296 160 2047 129 0 0 chr2 44164062 44164378 -206523476 - AluSx SINE Alu 0 312 20 2053 92 13 70 chr2 44164378 44164530 -206523324 - AluSc SINE Alu -149 160 1 390 124 0 174 chr2 44164530 44164584 -206523270 - L1MA2 LINE L1 -37 6267 6205 3257 122 33 4 chr2 44164633 44165577 -206522277 - L1M1 LINE L1 -4298 3267 2247 893 96 44 0 chr2 44215578 44215713 -206472141 + MER4-int LTR ERV1 1959 2099 -4499 866 116 78 0 chr2 44215714 44215843 -206472011 - LTR8 LTR ERV1 -552 139 1 2849 117 80 16 chr2 44215843 44216391 -206471463 + MER4-int LTR ERV1 2737 3319 -3279 2148 75 32 75 chr2 44216396 44216565 -206471289 + MER4-int LTR ERV1 3919 4094 -2504 2036 134 3 7 chr2 44216565 44216857 -206470997 - AluSg SINE Alu -19 291 1 2148 75 32 75 chr2 44216857 44217059 -206470795 + MER4-int LTR ERV1 4094 4274 -2324 183 114 0 0 chr2 44217075 44217110 -206470744 + (A)n Simple_repeat Simple_repeat 1 35 0 30 45 0 0 chr2 44217163 44217207 -206470647 + AT_rich Low_complexity Low_complexity 1 44 0 244 324 42 133 chr2 44217541 44217742 -206470112 - L2 LINE L2 -13 3259 3104 1933 176 0 3 chr2 44217742 44218055 -206469799 - AluJb SINE Alu 0 312 1 244 324 42 133 chr2 44218055 44218214 -206469640 - L2 LINE L2 -168 3104 2932 486 0 0 0 chr2 44220704 44220758 -206467096 + (CA)n Simple_repeat Simple_repeat 2 55 0 1731 145 23 0 chr2 44220794 44221056 -206466798 + AluJo SINE Alu 1 268 -44 189 0 0 0 chr2 44221063 44221084 -206466770 + (CA)n Simple_repeat Simple_repeat 1 21 0 189 237 17 17 chr2 44221513 44221572 -206466282 - MIR SINE MIR -31 231 173 * 451 289 44 0 chr2 44221568 44221682 -206466172 + L2 LINE L2 3153 3271 -1 307 339 16 16 chr2 44221688 44221809 -206466045 - MIR SINE MIR -131 131 11 391 191 123 0 chr2 44221965 44222133 -206465721 - LTR50 LTR ERVL -169 626 358 366 232 106 0 chr2 44222171 44222322 -206465532 - LTR50 LTR ERVL -589 206 40 2345 45 0 0 chr2 44222784 44223051 -206464803 - L1PA3 LINE L1 -3 6152 5886 1429 209 3 21 chr2 44223341 44223624 -206464230 + AluJo SINE Alu 5 282 -30 207 0 0 0 chr2 44223628 44223651 -206464203 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 213 394 32 19 chr2 44224055 44224210 -206463644 + MIR SINE MIR 32 188 -74 10667 157 41 30 chr2 44224235 44225514 -206462340 - L1MA3 LINE L1 0 7724 6461 2356 76 10 25 chr2 44225514 44225828 -206462026 - AluY SINE Alu -2 309 1 10667 157 41 30 chr2 44225828 44227797 -206460057 - L1MA3 LINE L1 -1263 6461 4438 2797 78 29 0 chr2 44227798 44228143 -206459711 - THE1A LTR MaLR 0 355 1 10636 90 81 0 chr2 44228143 44229605 -206458249 - THE1A-int LTR MaLR 0 1580 1 2886 77 11 0 chr2 44229605 44229956 -206457898 - THE1A LTR MaLR 0 355 1 806 181 7 0 chr2 44229956 44230111 -206457743 - L1MA3 LINE L1 -3124 4441 4286 832 149 8 8 chr2 44230134 44230268 -206457586 - AluJo SINE Alu -178 134 1 16011 145 33 25 chr2 44230268 44234111 -206453743 - L1MA3 LINE L1 -3266 4299 12 418 303 26 19 chr2 44234111 44234266 -206453588 - MIR SINE MIR -57 205 50 15248 113 18 57 chr2 44234331 44234448 -206453406 - Tigger1 DNA MER2_type 0 2418 2298 1594 183 8 0 chr2 44234448 44234716 -206453138 + AluJb SINE Alu 1 270 -42 9117 43 6 0 chr2 44234716 44235781 -206452073 + MER11C LTR ERVK 1 1071 0 15248 113 18 57 chr2 44235781 44236697 -206451157 - Tigger1 DNA MER2_type -119 2299 1348 1807 152 25 4 chr2 44236697 44236973 -206450881 + AluJo SINE Alu 1 282 -30 225 65 0 0 chr2 44236974 44237005 -206450849 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 15248 113 18 57 chr2 44237005 44238485 -206449369 - Tigger1 DNA MER2_type -1069 1349 1 2060 145 0 0 chr2 44238595 44238898 -206448956 - AluSx SINE Alu 0 312 10 533 174 17 35 chr2 44241882 44241997 -206445857 - HAL1 LINE L1 -1274 1233 1121 709 174 0 61 chr2 44242022 44242154 -206445700 - FLAM_C SINE Alu -19 124 1 578 233 93 5 chr2 44242183 44242293 -206445561 - L1M4 LINE L1 -3621 3944 3845 2227 108 0 0 chr2 44242293 44242580 -206445274 - AluSc SINE Alu -22 287 1 578 233 93 5 chr2 44242580 44242662 -206445192 - L1M4 LINE L1 -3720 3845 3735 2927 150 56 71 chr2 44242797 44243470 -206444384 - MER21B LTR ERV1 -1 862 372 2237 107 7 0 chr2 44243470 44243768 -206444086 - AluSx SINE Alu -12 300 1 2927 150 56 71 chr2 44243768 44244059 -206443795 - MER21B LTR ERV1 -491 372 78 10099 161 73 52 chr2 44244166 44244226 -206443628 - L1M4 LINE L1 -5319 2246 2189 2208 129 0 7 chr2 44244226 44244535 -206443319 - AluSx SINE Alu -5 307 1 10099 161 73 52 chr2 44244535 44246530 -206441324 - L1M4 LINE L1 -5376 2189 149 1607 153 59 14 chr2 44246667 44246955 -206440899 + AluJb SINE Alu 1 301 -11 2236 128 3 3 chr2 44247161 44247473 -206440381 + AluSx SINE Alu 1 312 0 784 177 8 0 chr2 44248433 44248563 -206439291 + FLAM_C SINE Alu 2 132 -1 183 42 0 0 chr2 44249191 44249215 -206438639 + (GA)n Simple_repeat Simple_repeat 2 25 0 314 208 0 0 chr2 44250222 44250270 -206437584 + AluJ/monomer SINE Alu 1 48 -251 340 242 30 0 chr2 44250938 44251004 -206436850 + MER58A DNA MER1_type 1 68 -39 1299 164 19 0 chr2 44251010 44251218 -206436636 - AluJo SINE Alu -12 300 89 521 281 276 31 chr2 44251241 44251925 -206435929 - L2 LINE L2 -573 2741 1890 1649 195 14 3 chr2 44252627 44252914 -206434940 + AluJb SINE Alu 1 290 -22 22 56 0 0 chr2 44252926 44252962 -206434892 + AT_rich Low_complexity Low_complexity 1 36 0 1080 138 63 0 chr2 44252962 44253121 -206434733 + AluJb SINE Alu 135 303 -9 1489 171 51 41 chr2 44253126 44253419 -206434435 + AluJo SINE Alu 1 296 -16 2308 78 14 7 chr2 44253442 44253735 -206434119 + AluSq SINE Alu 1 295 -18 2401 106 0 0 chr2 44253737 44254049 -206433805 + AluSq SINE Alu 1 312 -1 1465 136 0 37 chr2 44254782 44255024 -206432830 - AluJo SINE Alu -31 281 49 2432 68 0 0 chr2 44255417 44255713 -206432141 + AluY SINE Alu 1 296 -15 261 240 40 0 chr2 44256446 44256521 -206431333 - MER103 DNA DNA -31 135 58 2272 92 0 3 chr2 44257231 44257514 -206430340 + AluSx SINE Alu 1 282 -30 22 0 0 0 chr2 44257619 44257641 -206430213 + AT_rich Low_complexity Low_complexity 1 22 0 1558 52 5 0 chr2 44257903 44258094 -206429760 + L1PA3 LINE L1 5961 6152 -3 237 163 0 0 chr2 44258757 44258806 -206429048 + C-rich Low_complexity Low_complexity 3 51 0 676 183 53 0 chr2 44258809 44258940 -206428914 - AluJb SINE Alu -41 271 134 2238 109 0 13 chr2 44259051 44259355 -206428499 - AluY SINE Alu -11 300 1 206 233 0 0 chr2 44260953 44260996 -206426858 + CT-rich Low_complexity Low_complexity 2 44 0 2459 84 13 0 chr2 44262079 44262387 -206425467 + AluSq SINE Alu 1 312 -1 2149 126 13 7 chr2 44262605 44262914 -206424940 + AluSx SINE Alu 1 311 -1 288 0 0 0 chr2 44263592 44263624 -206424230 + (TG)n Simple_repeat Simple_repeat 2 33 0 942 171 59 11 chr2 44264111 44264298 -206423556 - AluJo SINE Alu -19 293 98 665 112 9 19 chr2 44264548 44264655 -206423199 + U6 snRNA snRNA 1 106 -1 894 274 132 45 chr2 44265544 44266037 -206421817 - L1MC4a LINE L1 -1960 5848 5313 23 78 0 0 chr2 44266160 44266211 -206421643 + AT_rich Low_complexity Low_complexity 1 51 0 2026 101 64 34 chr2 44266462 44266789 -206421065 - MER1B DNA MER1_type 0 337 1 899 117 58 0 chr2 44267215 44267352 -206420502 - FRAM SINE Alu -6 170 26 5086 92 15 12 chr2 44268137 44268866 -206418988 - L1PA13 LINE L1 -5 6158 5428 207 0 0 0 chr2 44268936 44268959 -206418895 + (T)n Simple_repeat Simple_repeat 1 23 0 200 35 35 0 chr2 44269568 44269597 -206418257 + (CA)n Simple_repeat Simple_repeat 1 30 0 946 120 0 0 chr2 44269859 44269992 -206417862 - FLAM_C SINE Alu -2 141 9 1138 103 0 0 chr2 44270483 44270673 -206417181 - AluY SINE Alu 0 326 137 1706 114 38 0 chr2 44270800 44270915 -206416939 - AluSc SINE Alu -63 246 137 390 21 0 0 chr2 44270915 44270962 -206416892 + (TG)n Simple_repeat Simple_repeat 2 48 0 1706 114 38 0 chr2 44270962 44271083 -206416771 - AluSc SINE Alu -172 137 1 292 104 0 21 chr2 44271087 44271135 -206416719 - L1ME2 LINE L1 -226 5938 5892 * 850 299 46 38 chr2 44271125 44271627 -206416227 - L1MEc LINE L1 -5231 1030 525 877 254 34 131 chr2 44271700 44272190 -206415664 - L1MEc LINE L1 -5538 532 105 2128 131 0 0 chr2 44272190 44272487 -206415367 - AluSx SINE Alu -15 297 1 877 254 34 131 chr2 44272487 44272578 -206415276 - L1MEc LINE L1 -5965 105 7 2065 247 74 45 chr2 44272631 44272700 -206415154 - HAL1 LINE L1 -1476 1031 965 2346 97 3 0 chr2 44272700 44273008 -206414846 - AluSc SINE Alu 0 309 1 2065 247 74 45 chr2 44273008 44273825 -206414029 - HAL1 LINE L1 -1542 965 119 265 239 45 0 chr2 44274711 44274778 -206413076 + MIR SINE MIR 46 115 -147 1708 164 7 20 chr2 44275649 44275948 -206411906 - AluJo SINE Alu -17 295 1 696 254 120 49 chr2 44278728 44279196 -206408658 - LTR33A LTR ERVL -8 515 15 2314 112 0 0 chr2 44280298 44280601 -206407253 - AluSx SINE Alu -9 303 1 790 183 78 0 chr2 44281239 44281392 -206406462 + MIR SINE MIR 67 231 -31 265 271 71 71 chr2 44281505 44281774 -206406080 + L2 LINE L2 1704 1972 -1342 233 195 0 39 chr2 44286685 44286762 -206401092 + GA-rich Low_complexity Low_complexity 6 79 0 262 200 200 0 chr2 44288022 44288112 -206399742 + MIR SINE MIR 106 213 -49 2697 45 0 3 chr2 44288114 44288423 -206399431 + AluY SINE Alu 1 308 -3 1409 145 9 18 chr2 44289339 44289567 -206398287 + AluJb SINE Alu 86 311 -1 419 306 94 76 chr2 44291609 44291992 -206395862 + L2 LINE L2 2882 3271 -1 399 21 0 0 chr2 44292289 44292337 -206395517 + (TG)n Simple_repeat Simple_repeat 1 48 0 192 97 0 0 chr2 44292339 44292370 -206395484 + (GA)n Simple_repeat Simple_repeat 2 32 0 278 280 13 0 chr2 44293572 44293647 -206394207 - MIR SINE MIR -127 135 60 203 237 17 51 chr2 44293671 44293730 -206394124 - MIR3 SINE MIR -38 170 114 1789 103 3 155 chr2 44293814 44294181 -206393673 + AluY SINE Alu 1 311 0 2446 100 0 0 chr2 44294918 44295218 -206392636 + AluSx SINE Alu 1 300 -12 246 167 97 0 chr2 44295349 44295421 -206392433 - L1MB7 LINE L1 -14 6170 6092 * 286 172 46 11 chr2 44295401 44295488 -206392366 + L1ME4a LINE L1 6032 6121 0 377 154 0 51 chr2 44295577 44295673 -206392181 + AluJ/FRAM SINE Alu 233 302 0 414 300 0 0 chr2 44295941 44296051 -206391803 + MIR SINE MIR 146 255 -7 499 149 35 0 chr2 44296216 44296303 -206391551 + MER4A LTR ERV1 1 90 -574 2503 69 0 13 chr2 44296303 44296609 -206391245 - AluY SINE Alu -9 302 1 1728 124 5 77 chr2 44296629 44297001 -206390853 + MER4A LTR ERV1 261 664 0 2700 112 45 5 chr2 44297004 44297651 -206390203 + MER4A-int LTR ERV1 1 809 -5789 2377 106 7 0 chr2 44297686 44297989 -206389865 + AluSg SINE Alu 1 305 -5 253 154 77 19 chr2 44298057 44298109 -206389745 + LTR49 LTR ERV1 258 312 -283 1342 155 53 64 chr2 44298138 44298662 -206389192 + MER4-int LTR ERV1 503 1568 -4320 228 86 29 0 chr2 44298665 44298700 -206389154 + U2 snRNA snRNA 1 36 -152 2347 90 7 56 chr2 44298700 44298951 -206388903 + MER4-int LTR ERV1 1558 1820 -4778 2332 111 7 0 chr2 44298951 44299257 -206388597 - AluSp SINE Alu -5 308 1 2347 90 7 56 chr2 44299257 44299345 -206388509 + MER4-int LTR ERV1 1820 1876 -4722 2305 108 0 7 chr2 44299345 44299650 -206388204 - AluSg1 SINE Alu -5 304 2 2347 90 7 56 chr2 44299650 44299719 -206388135 + MER4-int LTR ERV1 1876 1947 -4651 349 142 0 5 chr2 44299719 44299784 -206388070 + Alu SINE Alu 1 45 -263 335 131 0 0 chr2 44299885 44299946 -206387908 + AluSp/q SINE Alu 241 301 -2 12558 103 66 31 chr2 44299950 44300145 -206387709 + MER4A-int LTR ERV1 4293 4480 -2118 2310 90 7 0 chr2 44300145 44300434 -206387420 - AluSg SINE Alu -19 291 1 12558 103 66 31 chr2 44300434 44301013 -206386841 + MER4A-int LTR ERV1 4480 5038 -1560 2530 85 0 0 chr2 44301013 44301320 -206386534 - AluSc SINE Alu -1 308 2 12558 103 66 31 chr2 44301320 44301601 -206386253 + MER4A-int LTR ERV1 5038 5308 -1290 2433 71 0 32 chr2 44301601 44301909 -206385945 + AluY SINE Alu 1 298 -13 12558 103 66 31 chr2 44301909 44302406 -206385448 + MER4A-int LTR ERV1 5308 5786 -812 2365 104 0 3 chr2 44302406 44302703 -206385151 + AluSq SINE Alu 1 296 -17 12558 103 66 31 chr2 44302703 44303374 -206384480 + MER4A-int LTR ERV1 5786 6596 -2 527 132 22 11 chr2 44303381 44303472 -206384382 + MER4A LTR ERV1 1 92 -572 1732 126 161 75 chr2 44303478 44303850 -206384004 + MER4A LTR ERV1 261 664 0 348 286 81 76 chr2 44304903 44305113 -206382741 - MIR SINE MIR -23 239 29 210 139 0 0 chr2 44305222 44305258 -206382596 + (G)n Simple_repeat Simple_repeat 1 36 0 371 268 12 0 chr2 44305568 44305650 -206382204 + MER81 DNA DNA 29 111 -3 442 238 171 24 chr2 44305767 44305931 -206381923 + MIR SINE MIR 60 247 -15 267 266 95 22 chr2 44305943 44306165 -206381689 + L1ME4a LINE L1 5708 5945 -176 318 186 142 26 chr2 44306176 44306289 -206381565 + L1ME4a LINE L1 5995 6120 -1 1771 177 23 7 chr2 44306295 44306595 -206381259 + AluJb SINE Alu 1 305 -7 549 0 0 0 chr2 44306719 44306780 -206381074 + (TG)n Simple_repeat Simple_repeat 2 62 0 232 309 155 30 chr2 44307194 44307362 -206380492 - MIR SINE MIR -9 253 65 204 244 0 0 chr2 44308314 44308355 -206379499 + L2 LINE L2 3230 3270 -2 404 274 57 0 chr2 44309870 44309994 -206377860 + MIR SINE MIR 127 257 -5 1926 123 45 0 chr2 44310008 44310301 -206377553 + AluSx SINE Alu 1 305 0 219 311 194 0 chr2 44310304 44310407 -206377447 - MIR3 SINE MIR -52 156 34 2330 109 3 0 chr2 44311238 44311541 -206376313 - AluSx SINE Alu -8 304 1 261 250 163 0 chr2 44311626 44311706 -206376148 + L2 LINE L2 2672 2764 -550 1624 146 26 16 chr2 44311728 44312036 -206375818 + MLT1C LTR MaLR 9 319 -148 265 300 29 44 chr2 44312201 44312382 -206375472 + MIR SINE MIR 4 226 -36 208 271 0 17 chr2 44313097 44313156 -206374698 + G-rich Low_complexity Low_complexity 5 62 0 205 211 0 0 chr2 44314557 44314595 -206373259 + T-rich Low_complexity Low_complexity 1 38 0 917 287 131 49 chr2 44315670 44316027 -206371827 - L1M4 LINE L1 -3247 2899 2480 1523 127 93 21 chr2 44316027 44316318 -206371536 - AluJb SINE Alu 0 312 1 917 287 131 49 chr2 44316318 44316511 -206371343 - L1M4 LINE L1 -3666 2480 2304 969 261 48 11 chr2 44316517 44316838 -206371016 + MLT1H LTR MaLR 1 343 -249 405 268 0 16 chr2 44316938 44317065 -206370789 - MER113 DNA MER1_type? -395 126 2 206 300 50 50 chr2 44317097 44317197 -206370657 + L2 LINE L2 3154 3253 -19 1985 113 20 27 chr2 44318420 44318720 -206369134 - AluSx SINE Alu -14 298 1 2537 65 0 10 chr2 44318918 44319225 -206368629 - AluY SINE Alu -7 304 1 2230 94 14 0 chr2 44319560 44319848 -206368006 - AluSx SINE Alu -19 293 2 297 148 0 19 chr2 44319850 44319904 -206367950 + MLT1G1 LTR MaLR 543 595 0 249 128 0 0 chr2 44320101 44320140 -206367714 - MLT1D LTR MaLR 0 505 467 691 209 0 0 chr2 44320141 44320280 -206367574 + FLAM_C SINE Alu 2 140 -3 1817 191 113 28 chr2 44320289 44320724 -206367130 - MLT1D LTR MaLR -33 472 1 351 322 116 15 chr2 44320775 44320974 -206366880 - MLT1L LTR MaLR -8 607 389 1803 162 0 4 chr2 44321134 44321405 -206366449 - AluJo SINE Alu -38 274 5 981 220 98 11 chr2 44321440 44321763 -206366091 + LTR50 LTR ERVL 344 779 -16 860 175 29 174 chr2 44322579 44322970 -206364884 + L1ME LINE L1 5282 5537 -629 1579 196 10 10 chr2 44322970 44323261 -206364593 + AluJo SINE Alu 1 291 -21 860 175 29 174 chr2 44323261 44323321 -206364533 + L1ME LINE L1 5537 5604 -562 * 4494 167 20 28 chr2 44323288 44324331 -206363523 + L1MB4 LINE L1 5145 6179 -1 555 117 0 0 chr2 44324340 44324417 -206363437 + AluS SINE Alu 1 77 -235 507 93 0 12 chr2 44324443 44324529 -206363325 + L1MB4 LINE L1 6095 6179 -1 644 230 97 11 chr2 44324540 44324780 -206363074 + L1ME LINE L1 5593 5856 -298 565 319 71 8 chr2 44325281 44325519 -206362335 + MIR SINE MIR 10 262 0 801 227 33 70 chr2 44325601 44325874 -206361980 - LTR41 LTR ERVL -15 758 496 588 247 65 18 chr2 44325975 44326145 -206361709 - LTR41 LTR ERVL -595 178 1 575 230 32 0 chr2 44326237 44326363 -206361491 - MER94 DNA DNA 0 134 5 1145 243 3 14 chr2 44326688 44326984 -206360870 - AluY SINE Alu 0 311 19 2668 64 0 0 chr2 44327333 44327644 -206360210 - AluY SINE Alu 0 311 1 500 213 28 7 chr2 44327652 44327793 -206360061 + HsTC2 DNA Tc2 1752 1895 -3 250 341 162 0 chr2 44327814 44327993 -206359861 - L1MC/D LINE L1 -2149 5659 5452 473 141 0 0 chr2 44329164 44329235 -206358619 - AluSg/x SINE Alu -24 285 215 824 135 0 0 chr2 44329240 44329351 -206358503 - AluSq/x SINE Alu -201 111 1 333 207 110 0 chr2 44329505 44329587 -206358267 - MIR3 SINE MIR -20 188 98 628 173 79 101 chr2 44330853 44331131 -206356723 - ORSL DNA AcHobo -3 272 1 30 59 0 0 chr2 44331403 44331454 -206356400 + GC_rich Low_complexity Low_complexity 1 51 0 246 32 0 0 chr2 44331552 44331583 -206356271 + (CCCCAG)n Simple_repeat Simple_repeat 4 34 0 24 53 0 0 chr2 44332482 44332520 -206355334 + GC_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr2 44333307 44333341 -206354513 + AT_rich Low_complexity Low_complexity 1 34 0 1547 111 42 65 chr2 44333341 44333603 -206354251 + AluSx SINE Alu 6 261 -51 266 0 29 0 chr2 44333617 44333651 -206354203 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2514 56 20 0 chr2 44333655 44333957 -206353897 + AluY SINE Alu 1 308 -3 1715 166 51 13 chr2 44333995 44334369 -206353485 - L1MB8 LINE L1 -6 6172 5785 463 263 135 0 chr2 44334602 44334758 -206353096 - L3 LINE CR1 -37 1540 1364 1950 142 38 0 chr2 44335001 44335289 -206352565 + AluJb SINE Alu 1 299 -13 525 310 136 6 chr2 44335518 44335834 -206352020 + L3 LINE CR1 654 1010 -567 419 262 124 74 chr2 44335852 44336024 -206351830 + Charlie8 DNA MER1_type 1 163 -233 2076 111 50 0 chr2 44336024 44336303 -206351551 + AluSx SINE Alu 1 293 -19 419 262 124 74 chr2 44336303 44336471 -206351383 + Charlie8 DNA MER1_type 163 327 -69 188 290 48 0 chr2 44336533 44336595 -206351259 + L3 LINE CR1 1019 1083 -494 988 237 104 77 chr2 44336647 44337280 -206350574 - L1MC5 LINE L1 -44 7917 7268 409 220 17 8 chr2 44337454 44337572 -206350282 - L1MC4 LINE L1 -791 7251 7133 261 263 140 0 chr2 44337579 44337693 -206350161 - L1MC5 LINE L1 -880 7081 6952 2923 209 53 60 chr2 44337734 44337794 -206350060 - L1MB8 LINE L1 -743 5403 5344 922 173 58 0 chr2 44337794 44337950 -206349904 - FRAM SINE Alu 0 166 2 2923 209 53 60 chr2 44337950 44338056 -206349798 - L1MB8 LINE L1 -802 5344 5239 2130 129 3 0 chr2 44338056 44338343 -206349511 - AluSx SINE Alu -24 288 1 2923 209 53 60 chr2 44338343 44339048 -206348806 - L1MB8 LINE L1 -907 5239 4535 1801 112 4 12 chr2 44339048 44339297 -206348557 + AluSx SINE Alu 56 302 -10 2923 209 53 60 chr2 44339297 44339376 -206348478 - L1MB8 LINE L1 -1611 4535 4457 412 168 80 40 chr2 44339425 44339550 -206348304 - L1M4 LINE L1 -1556 4590 4461 2163 130 0 3 chr2 44339550 44339849 -206348005 - AluJb SINE Alu -14 298 1 896 253 20 63 chr2 44339850 44340245 -206347609 - L1M4 LINE L1 -2573 3573 3196 302 129 69 11 chr2 44340245 44340478 -206347376 + AluSq SINE Alu 1 302 0 189 0 0 0 chr2 44340669 44340690 -206347164 + (CTTAT)n Simple_repeat Simple_repeat 2 22 0 325 293 136 92 chr2 44340969 44341222 -206346632 + L3 LINE CR1 1186 1453 -124 763 177 0 8 chr2 44341222 44341352 -206346502 + FLAM_C SINE Alu 1 129 -4 325 293 136 92 chr2 44341352 44341371 -206346483 + L3 LINE CR1 1453 1470 -107 12046 168 13 10 chr2 44341382 44343978 -206343876 - L1 LINE L1 -1550 6015 3403 702 85 15 0 chr2 44343986 44344116 -206343738 - L1M1 LINE L1 -4028 3537 3406 1486 304 105 20 chr2 44344274 44345163 -206342691 + L2 LINE L2 2297 3269 -3 339 294 0 0 chr2 44345411 44345496 -206342358 - MER5A DNA MER1_type -2 187 103 230 261 68 23 chr2 44345434 44345522 -206342332 + MER5A DNA MER1_type 37 128 -61 * 253 329 0 0 chr2 44345562 44345638 -206342216 - MER81 DNA DNA -38 76 1 280 343 133 5 chr2 44345814 44346024 -206341830 - MIR SINE MIR -6 256 20 24 53 0 0 chr2 44346160 44346198 -206341656 + AT_rich Low_complexity Low_complexity 1 38 0 2434 100 0 0 chr2 44346320 44346630 -206341224 - AluSg SINE Alu 0 310 1 2401 90 0 7 chr2 44346782 44347081 -206340773 - AluSg SINE Alu -13 297 1 2385 93 0 3 chr2 44348334 44348636 -206339218 - AluSc SINE Alu -8 301 1 418 122 0 40 chr2 44349907 44349981 -206337873 + AluJb SINE Alu 62 132 -180 214 314 72 51 chr2 44350166 44350364 -206337490 + MIR3 SINE MIR 13 211 -51 1745 191 3 10 chr2 44351998 44352302 -206335552 - AluJo SINE Alu -10 302 1 210 71 0 0 chr2 44352488 44352516 -206335338 + (A)n Simple_repeat Simple_repeat 1 28 0 242 246 0 0 chr2 44352870 44352927 -206334927 + MIR SINE MIR 141 197 -65 1867 109 0 0 chr2 44352929 44353168 -206334686 - AluSx SINE Alu -21 291 53 6194 70 5 3 chr2 44353168 44353944 -206333910 + LTR17 LTR ERV1 3 780 0 221 246 31 46 chr2 44354060 44354125 -206333729 + MIR SINE MIR 199 262 0 771 271 64 13 chr2 44354267 44354503 -206333351 - MIR SINE MIR 0 262 15 1568 172 0 66 chr2 44354954 44355152 -206332702 - AluJb SINE Alu 0 314 143 2164 102 11 0 chr2 44355152 44355435 -206332419 + AluSg SINE Alu 5 290 -20 1568 172 0 66 chr2 44355435 44355568 -206332286 - AluJb SINE Alu -171 143 3 780 185 14 72 chr2 44356081 44356236 -206331618 - Zaphod DNA AcHobo -34 3997 3856 2150 104 0 7 chr2 44356236 44356548 -206331306 - AluSc SINE Alu 0 310 1 780 185 14 72 chr2 44356548 44356613 -206331241 - Zaphod DNA AcHobo -175 3856 3789 297 260 95 74 chr2 44356695 44356926 -206330928 + MLT1H1-int LTR MaLR 1136 1371 0 553 214 65 30 chr2 44357009 44357177 -206330677 - Zaphod DNA AcHobo -259 3772 3599 608 279 92 57 chr2 44357220 44357744 -206330110 - MLT1F LTR MaLR 0 542 1 2302 108 0 3 chr2 44358021 44358327 -206329527 + AluSx SINE Alu 3 307 -5 490 252 113 0 chr2 44358610 44358725 -206329129 - FLAM_A SINE Alu -4 129 2 2375 115 0 0 chr2 44358978 44359283 -206328571 - AluSx SINE Alu -7 305 1 270 252 81 111 chr2 44359433 44359731 -206328123 + MLT1H1-int LTR MaLR 1083 1371 0 697 259 55 61 chr2 44359733 44360085 -206327769 + MLT1H1 LTR MaLR 1 351 -239 1353 95 48 52 chr2 44360161 44360311 -206327543 + MER30 DNA MER1_type 1 151 -79 2474 105 0 0 chr2 44360311 44360624 -206327230 + AluSq SINE Alu 1 313 0 1353 95 48 52 chr2 44360624 44360704 -206327150 + MER30 DNA MER1_type 151 230 0 31 44 0 0 chr2 44360789 44360834 -206327020 + AT_rich Low_complexity Low_complexity 1 45 0 874 124 0 8 chr2 44360836 44360965 -206326889 - FLAM_C SINE Alu -5 128 1 290 115 77 0 chr2 44360971 44361023 -206326831 + MLT1H1 LTR MaLR 500 555 0 3032 196 52 59 chr2 44361023 44361882 -206325972 - Zaphod DNA AcHobo -3083 948 96 270 0 0 0 chr2 44361882 44361912 -206325942 + (TG)n Simple_repeat Simple_repeat 1 30 0 261 108 0 0 chr2 44361912 44361949 -206325905 - MER115 DNA AcHobo -656 37 1 384 265 26 3 chr2 44362095 44362213 -206325641 - MLT1K LTR MaLR 0 588 484 279 288 0 0 chr2 44363225 44363298 -206324556 + CT-rich Low_complexity Low_complexity 1 73 0 1758 149 83 4 chr2 44363371 44363647 -206324207 - AluJo SINE Alu -14 298 1 276 298 29 0 chr2 44363649 44363753 -206324101 + L1ME4a LINE L1 5818 5924 -197 342 0 0 0 chr2 44363819 44363857 -206323997 + (TA)n Simple_repeat Simple_repeat 2 39 0 1287 56 0 0 chr2 44364381 44364541 -206323313 - L1PA5 LINE L1 -1 6153 5994 348 42 42 0 chr2 44365779 44365827 -206322027 - AluY SINE Alu -11 291 242 729 148 57 0 chr2 44365853 44365975 -206321879 - FRAM SINE Alu -47 129 1 2022 61 0 12 chr2 44367800 44368072 -206319782 - AluY SINE Alu 0 307 39 1817 176 4 0 chr2 44369404 44369683 -206318171 + AluJo SINE Alu 1 280 -32 216 0 0 0 chr2 44369685 44369709 -206318145 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 329 274 63 0 chr2 44369901 44369996 -206317858 - Charlie8 DNA MER1_type -2289 128 28 1876 143 35 3 chr2 44370048 44370334 -206317520 - AluJb SINE Alu -9 303 9 313 254 30 47 chr2 44370657 44370826 -206317028 - L2 LINE L2 -809 2505 2340 260 211 11 33 chr2 44371100 44371190 -206316664 + A-rich Low_complexity Low_complexity 5 92 0 324 291 33 26 chr2 44371412 44371563 -206316291 - L1ME3A LINE L1 -222 5948 5797 583 214 8 30 chr2 44421849 44421980 -206265874 + MIR SINE MIR 31 158 -104 2603 190 14 16 chr2 44422466 44422971 -206264883 - MLT1F LTR MaLR 0 542 39 231 203 0 0 chr2 44423409 44423473 -206264381 + (TTCA)n Simple_repeat Simple_repeat 2 65 0 266 239 87 33 chr2 44423519 44423611 -206264243 - L2 LINE L2 -3 3310 3214 2372 128 0 43 chr2 44424055 44424431 -206263423 + MER1A DNA MER1_type 1 360 -169 259 93 47 0 chr2 44424607 44424650 -206263204 + MLT1L LTR MaLR 215 259 -356 831 278 86 32 chr2 44424713 44425120 -206262734 + LTR16A LTR ERVL 16 444 -6 484 324 64 10 chr2 44425137 44425341 -206262513 + MLT1J LTR MaLR 295 509 -2 494 278 82 27 chr2 44427328 44427546 -206260308 - MIR SINE MIR 0 262 42 2260 101 0 35 chr2 44428632 44428949 -206258905 + AluSx SINE Alu 1 306 -6 746 289 22 22 chr2 44429264 44429496 -206258358 + MIR SINE MIR 10 241 -21 667 113 157 0 chr2 44429708 44429823 -206258031 - FLAM_C SINE Alu 0 133 1 593 233 96 0 chr2 44430194 44430340 -206257514 + MLT1J LTR MaLR 3 162 -349 823 244 15 15 chr2 44430388 44430593 -206257261 + MIR SINE MIR 26 230 -32 663 269 116 19 chr2 44430651 44430867 -206256987 + MLT1J LTR MaLR 275 511 0 481 291 67 43 chr2 44431096 44431135 -206256719 - MIR SINE MIR 0 262 225 1471 201 74 14 chr2 44431135 44431419 -206256435 - AluJb SINE Alu -11 301 1 481 291 67 43 chr2 44431419 44431487 -206256367 - MIR SINE MIR -37 225 160 1866 131 23 45 chr2 44431487 44431839 -206256015 - MER2 DNA MER2_type 0 344 1 481 291 67 43 chr2 44431839 44431940 -206255914 - MIR SINE MIR -102 160 48 213 175 0 0 chr2 44432511 44432551 -206255303 + C-rich Low_complexity Low_complexity 5 44 0 214 308 26 13 chr2 44432838 44432916 -206254938 + L3 LINE CR1 1483 1561 -16 2336 96 3 10 chr2 44433691 44434003 -206253851 + AluSp SINE Alu 4 313 0 1933 151 0 0 chr2 44434583 44434894 -206252960 - AluSx SINE Alu -1 311 1 892 197 48 9 chr2 44434930 44435158 -206252696 - Charlie5 DNA MER1_type 0 2624 2388 2334 55 6 13 chr2 44436518 44436830 -206251024 + AluY SINE Alu 1 310 -1 213 337 40 50 chr2 44436830 44436931 -206250923 - MIR3 SINE MIR -8 200 101 781 243 54 27 chr2 44437411 44437670 -206250184 - L2 LINE L2 0 3313 3048 247 237 54 0 chr2 44437726 44437813 -206250041 - MIR3 SINE MIR -8 200 105 894 247 162 36 chr2 44437962 44438350 -206249504 + MLT1J2 LTR MaLR 14 450 0 192 333 0 0 chr2 44438456 44438510 -206249344 - MIR3 SINE MIR -37 171 118 770 281 97 40 chr2 44438599 44438950 -206248904 + MLT1K LTR MaLR 140 520 -68 2314 71 3 0 chr2 44438950 44439246 -206248608 - AluY SINE Alu -14 297 1 770 281 97 40 chr2 44439246 44439317 -206248537 + MLT1K LTR MaLR 520 586 -2 219 235 161 12 chr2 44439318 44439399 -206248455 - L2 LINE L2 -6 3307 3215 309 256 78 11 chr2 44440521 44440611 -206247243 - MLT1K LTR MaLR -339 249 154 337 297 30 0 chr2 44440612 44440713 -206247141 - MIR SINE MIR -71 191 88 312 244 0 13 chr2 44440867 44440945 -206246909 + MLT1L LTR MaLR 322 398 -217 1086 65 0 0 chr2 44441013 44441151 -206246703 - AluY SINE Alu -14 297 160 252 253 89 0 chr2 44441152 44441231 -206246623 + MLT1L LTR MaLR 507 592 -23 184 261 29 29 chr2 44441847 44441916 -206245938 - MIR3 SINE MIR -134 74 6 525 243 83 35 chr2 44441933 44442102 -206245752 + MER63A DNA MER1_type 29 205 -5 2228 108 82 18 chr2 44442499 44442841 -206245013 + THE1B LTR MaLR 1 364 0 282 313 96 100 chr2 44443264 44443494 -206244360 + L2 LINE L2 3018 3246 -26 2123 107 3 13 chr2 44443880 44444189 -206243665 + AluSx SINE Alu 1 306 -6 1595 159 74 0 chr2 44444245 44444516 -206243338 - AluJb SINE Alu -14 298 8 800 161 0 0 chr2 44444531 44444655 -206243199 - FLAM_C SINE Alu -18 125 2 313 303 148 7 chr2 44445308 44445450 -206242404 + MIR SINE MIR 35 196 -66 2308 90 0 0 chr2 44445542 44445841 -206242013 - AluSg SINE Alu -11 299 1 294 295 0 16 chr2 44446190 44446312 -206241542 + CT-rich Low_complexity Low_complexity 2 121 0 1340 75 0 0 chr2 44446512 44446685 -206241169 + AluY SINE Alu 124 296 -15 232 335 114 13 chr2 44446706 44446942 -206240912 - L1MC4a LINE L1 -1736 6072 5813 444 259 50 14 chr2 44446994 44447133 -206240721 - MIR SINE MIR -35 227 84 2187 107 0 3 chr2 44447203 44447503 -206240351 - AluSx SINE Alu -12 300 2 396 267 27 87 chr2 44448576 44448726 -206239128 - MIR SINE MIR -22 240 100 327 307 15 15 chr2 44448929 44449066 -206238788 + CT-rich Low_complexity Low_complexity 1 137 0 1611 120 47 8 chr2 44449079 44449337 -206238517 - AluJb SINE Alu -34 278 11 271 236 28 14 chr2 44453331 44453403 -206234451 + CT-rich Low_complexity Low_complexity 1 73 0 293 175 35 0 chr2 44453610 44453667 -206234187 + MER5A DNA MER1_type 131 189 0 844 205 0 67 chr2 44454100 44454203 -206233651 + MER3 DNA MER1_type 14 97 -112 2205 107 0 10 chr2 44454203 44454513 -206233341 + AluSx SINE Alu 1 307 -5 844 205 0 67 chr2 44454513 44454619 -206233235 + MER3 DNA MER1_type 97 209 0 899 216 23 6 chr2 44455258 44455429 -206232425 - MER45A DNA AcHobo -4 174 1 1198 158 15 10 chr2 44455482 44455685 -206232169 + AluJo SINE Alu 36 239 -73 393 298 24 8 chr2 44455915 44456039 -206231815 - MIR SINE MIR 0 262 137 665 186 14 21 chr2 44456048 44456188 -206231666 + L1ME2 LINE L1 6017 6155 -9 206 284 62 12 chr2 44456228 44456309 -206231545 - MIR SINE MIR -136 126 42 415 253 0 0 chr2 44456389 44456476 -206231378 + MIR SINE MIR 92 178 -84 2277 91 3 7 chr2 44456831 44457138 -206230716 + AluSp SINE Alu 1 306 -7 2222 103 7 0 chr2 44457150 44457452 -206230402 + AluSx SINE Alu 1 304 -8 736 188 8 8 chr2 44457565 44457698 -206230156 + FLAM_C SINE Alu 1 133 0 205 298 157 0 chr2 44457816 44457937 -206229917 + L2 LINE L2 3161 3300 -13 430 259 29 7 chr2 44458197 44458336 -206229518 - MIR3 SINE MIR -65 143 2 290 337 10 10 chr2 44459210 44459308 -206228546 - L2 LINE L2 0 3272 3175 738 285 100 26 chr2 44459385 44460052 -206227802 - L2 LINE L2 -23 3290 2579 199 362 61 0 chr2 44460608 44460771 -206227083 - L2 LINE L2 -942 2372 2200 2061 113 3 26 chr2 44460779 44461088 -206226766 + AluSg SINE Alu 1 302 -8 2280 101 3 0 chr2 44461975 44462282 -206225572 + AluSp SINE Alu 1 308 -5 311 324 52 7 chr2 44462652 44462788 -206225066 - L1M4 LINE L1 -2963 3183 3042 1820 201 54 13 chr2 44463001 44463390 -206224464 - MLT1F LTR MaLR -8 534 130 2085 121 0 29 chr2 44463395 44463536 -206224318 + AluSx SINE Alu 1 145 -167 2202 113 3 0 chr2 44463536 44463847 -206224007 + AluSq SINE Alu 1 312 -1 2085 121 0 29 chr2 44463847 44464018 -206223836 + AluSx SINE Alu 145 304 -8 180 0 0 0 chr2 44464532 44464552 -206223302 + (TTCA)n Simple_repeat Simple_repeat 2 21 0 221 232 130 0 chr2 44464561 44464630 -206223224 - L2 LINE L2 -52 3220 3143 700 133 9 0 chr2 44466353 44466458 -206221396 - AluJb SINE Alu -29 283 178 1202 121 0 16 chr2 44466505 44466695 -206221159 + AluJb SINE Alu 120 306 -6 397 123 0 37 chr2 44466789 44466870 -206220984 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 741 174 9 0 chr2 44466870 44466985 -206220869 - FLAM_C SINE Alu -16 117 2 386 290 98 38 chr2 44469998 44470181 -206217673 - MIR SINE MIR -37 225 32 366 214 250 0 chr2 44470942 44471082 -206216772 + MIR SINE MIR 18 192 -70 637 276 49 6 chr2 44472009 44472172 -206215682 + MLT1J LTR MaLR 1 170 -341 956 184 41 90 chr2 44472172 44472312 -206215542 - MLT1A1 LTR MaLR 0 365 241 2160 90 10 22 chr2 44472312 44472624 -206215230 - AluSq SINE Alu -5 308 1 956 184 41 90 chr2 44472624 44472727 -206215127 - MLT1A1 LTR MaLR -124 241 134 1271 175 32 28 chr2 44472727 44472978 -206214876 - MSTB LTR MaLR 0 426 175 1419 39 0 17 chr2 44472983 44473186 -206214668 + AluY SINE Alu 105 304 0 990 169 11 11 chr2 44473187 44473364 -206214490 - MSTB LTR MaLR -249 177 1 791 131 46 0 chr2 44473366 44473496 -206214358 - MLT1A1 LTR MaLR -229 136 1 574 262 123 40 chr2 44473548 44473800 -206214054 + MLT1J LTR MaLR 239 511 0 3496 121 44 22 chr2 44473870 44474455 -206213399 + MER4B LTR ERV1 9 606 -4 795 266 174 16 chr2 44475658 44476070 -206211784 + MLT1J LTR MaLR 1 436 -14 208 279 34 89 chr2 44476174 44476411 -206211443 - L2 LINE L2 -202 3070 2847 1764 147 7 3 chr2 44476500 44476785 -206211069 - AluJo SINE Alu -15 297 12 2372 84 0 0 chr2 44476822 44477132 -206210722 + AluY SINE Alu 1 310 -1 2968 180 18 50 chr2 44477493 44478056 -206209798 - L1ME1 LINE L1 -5 6161 5626 2126 99 17 0 chr2 44478056 44478350 -206209504 - AluSp SINE Alu -14 299 1 2968 180 18 50 chr2 44478350 44478529 -206209325 - L1ME1 LINE L1 -540 5626 5443 1511 208 0 7 chr2 44478585 44478874 -206208980 - AluJo SINE Alu -25 287 1 827 164 8 0 chr2 44478885 44479019 -206208835 - AluJo SINE Alu -176 136 2 1348 132 5 0 chr2 44479028 44479240 -206208614 - AluSq SINE Alu -10 303 91 1839 201 60 35 chr2 44479243 44479464 -206208390 - L1ME1 LINE L1 -1009 5137 4923 1836 144 16 23 chr2 44479464 44479770 -206208084 - AluJb SINE Alu -8 304 1 1839 201 60 35 chr2 44479770 44480065 -206207789 - L1ME1 LINE L1 -1223 4923 4608 394 195 61 12 chr2 44480069 44480151 -206207703 - L1ME4a LINE L1 -52 6069 5984 37972 32 17 1 chr2 44480312 44486339 -206201515 + L1PA3 LINE L1 2 6153 -2 4083 198 32 5 chr2 44486412 44487284 -206200570 - L1ME1 LINE L1 -5 6161 5266 720 255 77 14 chr2 44487332 44487540 -206200314 - MIR SINE MIR -40 222 2 2051 134 0 0 chr2 44487660 44487993 -206199861 - AluSx SINE Alu 0 312 1 1375 198 74 142 chr2 44487997 44488175 -206199679 - Charlie7 DNA MER1_type -358 2254 2066 2388 94 0 3 chr2 44488175 44488483 -206199371 - AluY SINE Alu -4 307 1 1375 198 74 142 chr2 44488483 44488582 -206199272 - Charlie7 DNA MER1_type -546 2066 1962 2370 68 0 0 chr2 44488582 44488891 -206198963 - AluY SINE Alu 0 309 1 1375 198 74 142 chr2 44488891 44488992 -206198862 - Charlie7 DNA MER1_type -650 1962 1856 2313 65 0 31 chr2 44488992 44489305 -206198549 - AluY SINE Alu 0 304 1 1375 198 74 142 chr2 44489305 44489633 -206198221 - Charlie7 DNA MER1_type -756 1856 1591 259 328 26 17 chr2 44489825 44489941 -206197913 - Charlie7 DNA MER1_type -2361 251 135 279 79 0 0 chr2 44490965 44491003 -206196851 + (TG)n Simple_repeat Simple_repeat 1 38 0 449 137 0 0 chr2 44492407 44492480 -206195374 - MER53 DNA DNA -116 73 1 296 234 107 148 chr2 44492482 44492773 -206195081 - L2 LINE L2 -23 3249 2971 396 281 18 16 chr2 44493255 44493405 -206194449 + MIR SINE MIR 5 150 -67 1056 98 0 0 chr2 44494248 44494380 -206193474 - AluYb8 SINE Alu -186 132 1 1063 158 16 5 chr2 44494412 44494596 -206193258 + MLT1A2 LTR MaLR 189 374 0 2336 123 0 0 chr2 44494727 44495075 -206192779 - AluSx SINE Alu 0 348 1 207 329 108 19 chr2 44495447 44495605 -206192249 - MIR SINE MIR -43 219 48 4638 153 5 12 chr2 44497576 44498395 -206189459 - L1MB7 LINE L1 -49 6135 5323 276 328 37 15 chr2 44498396 44498530 -206189324 - AluJb SINE Alu -9 293 157 907 118 0 15 chr2 44498582 44498739 -206189115 - FLAM_C SINE Alu 0 155 1 1128 210 94 6 chr2 44498739 44499067 -206188787 - L1M4 LINE L1 -814 5332 4976 328 188 94 12 chr2 44499081 44499166 -206188688 - L1M4 LINE L1 -2982 3164 3073 2408 192 80 29 chr2 44499228 44499852 -206188002 - L1M4 LINE L1 -1142 5004 4349 1074 281 137 19 chr2 44500529 44500959 -206186895 + MLT1J LTR MaLR 1 481 -30 210 37 0 0 chr2 44500978 44501005 -206186849 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 1852 166 7 0 chr2 44501005 44501290 -206186564 - AluSx SINE Alu -22 290 1 567 327 29 11 chr2 44501318 44501590 -206186264 - L2 LINE L2 -1607 1707 1431 1178 153 0 0 chr2 44501737 44501907 -206185947 - FRAM SINE Alu -11 165 1 274 103 0 0 chr2 44501932 44501971 -206185883 + AluSx SINE Alu 1 39 -261 258 344 24 0 chr2 44502007 44502132 -206185722 + L2 LINE L2 921 1048 -2266 1649 117 42 8 chr2 44502248 44502487 -206185367 + AluSx SINE Alu 40 286 -26 2052 174 70 10 chr2 44502503 44502905 -206184949 + MSTB LTR MaLR 1 426 0 678 136 0 0 chr2 44502905 44503008 -206184846 - FLAM_C SINE Alu -29 114 12 2469 78 3 3 chr2 44503239 44503548 -206184306 - AluY SINE Alu -2 309 1 381 299 27 43 chr2 44503564 44503751 -206184103 - L1ME3A LINE L1 -204 5966 5783 350 325 179 22 chr2 44503757 44504471 -206183383 - L2 LINE L2 -2266 1048 223 788 128 0 0 chr2 44505377 44505494 -206182360 - FLAM_C SINE Alu -16 117 1 1114 237 124 34 chr2 44506082 44506551 -206181303 - MLT1J LTR MaLR 0 511 1 1331 143 12 75 chr2 44506727 44506763 -206181091 - AluJo SINE Alu -3 309 272 2143 115 10 20 chr2 44506763 44507067 -206180787 + AluSx SINE Alu 1 301 -11 1331 143 12 75 chr2 44507067 44507282 -206180572 - AluJo SINE Alu -40 272 74 28 29 0 0 chr2 44507626 44507661 -206180193 + AT_rich Low_complexity Low_complexity 1 35 0 227 295 143 0 chr2 44509914 44510026 -206177828 - MIR SINE MIR -45 217 90 357 279 7 14 chr2 44510759 44510899 -206176955 + (TG)n Simple_repeat Simple_repeat 1 139 0 528 77 0 0 chr2 44511236 44511314 -206176540 + (TC)n Simple_repeat Simple_repeat 2 79 0 1481 143 33 0 chr2 44511631 44511876 -206175978 - MLT1D LTR MaLR 0 505 253 1287 188 5 0 chr2 44511878 44512096 -206175758 + AluJb SINE Alu 87 305 -7 1184 152 36 5 chr2 44512121 44512345 -206175509 - MLT1D LTR MaLR -263 242 12 2055 194 60 12 chr2 44513742 44514222 -206173632 - MLT1D LTR MaLR -2 503 1 204 365 56 0 chr2 44514908 44515034 -206172820 + L2 LINE L2 2969 3101 -171 470 269 127 64 chr2 44515619 44515683 -206172171 + L2 LINE L2 2743 2802 -511 2026 122 0 4 chr2 44515683 44515951 -206171903 + AluSx SINE Alu 1 269 -43 225 0 0 0 chr2 44515951 44515976 -206171878 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 470 269 127 64 chr2 44515986 44516431 -206171423 + L2 LINE L2 2802 3279 -34 182 225 50 0 chr2 44516458 44516498 -206171356 - L2 LINE L2 -23 3290 3249 420 292 136 0 chr2 44516981 44517135 -206170719 + MIR SINE MIR 28 202 -60 304 245 7 122 chr2 44517300 44517372 -206170482 - MER5B DNA MER1_type -55 123 73 2234 111 3 19 chr2 44517372 44517688 -206170166 - AluSx SINE Alu -1 311 1 304 245 7 122 chr2 44517688 44517754 -206170100 - MER5B DNA MER1_type -105 73 1 240 247 25 12 chr2 44518667 44518748 -206169106 + MER5B DNA MER1_type 9 90 -88 1719 198 104 11 chr2 44519107 44519567 -206168287 + MLT1D LTR MaLR 2 504 -1 262 206 0 29 chr2 44519985 44520053 -206167801 + L2 LINE L2 2990 3055 -217 608 131 31 46 chr2 44520142 44520272 -206167582 + Tigger7 DNA MER2_type 2243 2370 -121 1563 184 61 0 chr2 44520533 44520811 -206167043 + Tigger7 DNA MER2_type 154 448 -285 346 154 9 118 chr2 44520813 44520857 -206166997 + L1ME4a LINE L1 5787 5834 -287 1767 187 0 9 chr2 44520857 44521172 -206166682 + AluJb SINE Alu 1 312 0 346 154 9 118 chr2 44521172 44521237 -206166617 + L1ME4a LINE L1 5834 5884 -237 1451 132 28 24 chr2 44521284 44521535 -206166319 + Tigger7 DNA MER2_type 2238 2489 -2 855 260 128 57 chr2 44521572 44521651 -206166203 + L1ME4a LINE L1 5589 5661 -460 2419 83 3 25 chr2 44521651 44521965 -206165889 + AluSp SINE Alu 1 307 -6 855 260 128 57 chr2 44521965 44522362 -206165492 + L1ME4a LINE L1 5661 6099 -22 1840 140 62 4 chr2 44523016 44523288 -206164566 + AluSx SINE Alu 1 288 -24 2204 114 13 3 chr2 44523686 44523992 -206163862 - AluSp SINE Alu -4 309 1 597 298 57 20 chr2 44524005 44524304 -206163550 - L1ME4a LINE L1 -197 5924 5615 365 302 81 12 chr2 44526024 44526196 -206161658 + L2 LINE L2 2397 2580 -734 2370 119 0 0 chr2 44526810 44527122 -206160732 - AluSx SINE Alu 0 312 1 204 146 24 0 chr2 44527187 44527228 -206160626 + (TG)n Simple_repeat Simple_repeat 1 42 0 213 327 180 0 chr2 44527442 44527592 -206160262 - MIR3 SINE MIR -2 206 30 231 346 39 0 chr2 44528330 44528486 -206159368 - L2 LINE L2 -213 3059 2898 2353 93 0 0 chr2 44528517 44528836 -206159018 + AluSx SINE Alu 1 319 0 1532 154 33 55 chr2 44530822 44531095 -206156759 - AluJo SINE Alu -8 304 38 382 245 47 9 chr2 44531218 44531324 -206156530 - MER103 DNA DNA -55 111 2 1834 154 0 69 chr2 44531341 44531506 -206156348 - AluSx SINE Alu -16 296 162 351 0 0 0 chr2 44531506 44531545 -206156309 + (TA)n Simple_repeat Simple_repeat 1 39 0 1834 154 0 69 chr2 44531545 44531697 -206156157 - AluSx SINE Alu -150 162 1 200 284 45 0 chr2 44532030 44532097 -206155757 + MIR SINE MIR 67 136 -72 317 203 0 0 chr2 44532438 44532497 -206155357 - L2 LINE L2 0 3313 3255 729 33 0 0 chr2 44532783 44532875 -206154979 + (TC)n Simple_repeat Simple_repeat 1 92 0 1265 125 15 0 chr2 44533155 44533355 -206154499 - L1PB3 LINE L1 0 6154 5952 2569 75 0 0 chr2 44534066 44534372 -206153482 - AluSx SINE Alu -6 306 1 2226 102 27 0 chr2 44534487 44534781 -206153073 - AluSq SINE Alu -11 302 1 270 276 49 16 chr2 44535006 44535129 -206152725 - MER117 DNA MER1_type -18 179 53 319 265 11 34 chr2 44535147 44535249 -206152605 - MIR3 SINE MIR -29 179 81 190 301 112 21 chr2 44535777 44535920 -206151934 + L2 LINE L2 2933 3088 -184 215 209 0 0 chr2 44536539 44536582 -206151272 + G-rich Low_complexity Low_complexity 2 44 0 206 347 53 0 chr2 44537010 44537105 -206150749 + MIR SINE MIR 30 129 -79 231 270 30 40 chr2 44537506 44537606 -206150248 + MIR SINE MIR 163 261 -1 1650 181 30 3 chr2 44537696 44538000 -206149854 + AluJo SINE Alu 1 312 0 1376 239 79 75 chr2 44538090 44538633 -206149221 - MLT1H LTR MaLR 0 549 5 214 290 65 0 chr2 44538769 44538831 -206149023 - L3 LINE CR1 -17 1560 1495 317 321 131 18 chr2 44538851 44539072 -206148782 - L3 LINE CR1 -251 1326 1081 1214 218 135 16 chr2 44539372 44539749 -206148105 - L1ME3 LINE L1 0 6162 5741 959 234 119 18 chr2 44539748 44540026 -206147828 + L1ME LINE L1 5416 5721 -441 * 466 316 58 0 chr2 44540096 44540270 -206147584 - L1ME3 LINE L1 -402 5719 5536 998 215 117 49 chr2 44541688 44542097 -206145757 - LTR16A1 LTR ERVL -17 440 4 283 241 7 0 chr2 44542783 44542848 -206145006 - MER91 DNA MER1_type -3 187 127 199 253 30 111 chr2 44543616 44543715 -206144139 - MER5B DNA MER1_type -87 91 1 793 288 56 0 chr2 44545118 44545333 -206142521 - MIR SINE MIR -31 231 5 1523 263 101 21 chr2 44545419 44545884 -206141970 - MLT1G1 LTR MaLR 0 595 67 2462 73 0 6 chr2 44545884 44546199 -206141655 + AluSp SINE Alu 1 313 0 1523 263 101 21 chr2 44546199 44546272 -206141582 - MLT1G1 LTR MaLR -528 67 1 428 292 88 12 chr2 44546374 44546545 -206141309 - MIR SINE MIR -10 252 69 5721 166 91 64 chr2 44546950 44547712 -206140142 - L1MC3 LINE L1 0 7995 7254 2058 103 0 3 chr2 44547712 44547994 -206139860 - AluSg SINE Alu -16 294 14 5721 166 91 64 chr2 44547994 44548460 -206139394 - L1MC3 LINE L1 -741 7254 6802 10577 28 6 111 chr2 44548469 44550017 -206137837 - SVA Other Other 0 1386 1 341 45 0 90 chr2 44550017 44550074 -206137780 - AluSp/q SINE Alu -8 295 243 5721 166 91 64 chr2 44550074 44550636 -206137218 - L1MC3 LINE L1 -1193 6802 6000 373 320 7 47 chr2 44550678 44550847 -206137007 - MIR SINE MIR -46 216 56 553 311 40 0 chr2 44550981 44551129 -206136725 + MIR3 SINE MIR 43 196 -12 236 250 115 40 chr2 44551413 44551561 -206136293 - MER112 DNA MER1_type -60 200 42 427 291 36 37 chr2 44551596 44551796 -206136058 - MIR SINE MIR -44 164 11 369 309 133 54 chr2 44552741 44552823 -206135031 + L2 LINE L2 2997 3071 -242 2302 86 7 0 chr2 44552823 44553127 -206134727 - AluSx SINE Alu -6 306 1 369 309 133 54 chr2 44553127 44553312 -206134542 + L2 LINE L2 3071 3291 -22 198 103 0 0 chr2 44553312 44553341 -206134513 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 369 309 133 54 chr2 44553341 44553366 -206134488 + L2 LINE L2 3291 3313 0 2148 132 0 0 chr2 44554100 44554411 -206133443 + AluSx SINE Alu 1 311 -1 1725 210 69 15 chr2 44554411 44554891 -206132963 - L1ME3A LINE L1 -301 5869 5364 335 252 153 9 chr2 44555118 44555229 -206132625 + MIR SINE MIR 63 189 -73 1105 214 9 18 chr2 44556245 44556469 -206131385 - MER58A DNA MER1_type -2 222 1 1784 321 27 31 chr2 44556479 44557117 -206130737 + MER110-int LTR ERV1 2021 2655 -1992 2185 104 7 0 chr2 44557172 44557479 -206130375 - AluY SINE Alu -2 309 1 319 236 11 45 chr2 44558488 44558577 -206129277 - MIR3 SINE MIR -13 195 110 200 320 26 51 chr2 44558699 44558855 -206128999 - L2 LINE L2 -1 3312 3161 526 221 27 34 chr2 44559748 44559897 -206127957 - MARNA DNA Mariner -128 458 311 278 360 86 0 chr2 44559938 44560077 -206127777 - L2 LINE L2 -8 3305 3155 821 256 52 28 chr2 44560238 44560488 -206127366 - MIR SINE MIR 0 262 7 427 295 13 13 chr2 44560590 44560739 -206127115 + L1ME LINE L1 5538 5686 -435 347 253 11 0 chr2 44560743 44560830 -206127024 + L1ME LINE L1 5732 5819 -302 210 250 0 0 chr2 44561403 44561447 -206126407 + (TG)n Simple_repeat Simple_repeat 1 44 0 1782 72 5 0 chr2 44561592 44561815 -206126039 + AluSp SINE Alu 2 225 -88 841 81 0 0 chr2 44561815 44561926 -206125928 + AluSp/q SINE Alu 188 298 -15 181 243 0 100 chr2 44562151 44562221 -206125633 - MIR3 SINE MIR -12 196 134 427 333 85 38 chr2 44564333 44564861 -206122993 + L2 LINE L2 2422 2974 -340 206 175 0 0 chr2 44565394 44565434 -206122420 - L2 LINE L2 -1 3312 3273 1565 154 0 19 chr2 44565434 44565700 -206122154 + AluJo SINE Alu 15 275 -37 289 267 43 52 chr2 44565783 44565899 -206121955 - L2 LINE L2 -225 3047 2933 200 289 39 58 chr2 44565900 44566004 -206121850 + MIR SINE MIR 91 192 -70 257 200 0 0 chr2 44566145 44566185 -206121669 + MER4B LTR ERV1 499 538 -72 213 39 0 0 chr2 44566186 44566212 -206121642 + (A)n Simple_repeat Simple_repeat 1 26 0 187 302 0 16 chr2 44566424 44566487 -206121367 + L2 LINE L2 3250 3311 -2 342 0 0 0 chr2 44567240 44567278 -206120576 + (GA)n Simple_repeat Simple_repeat 2 39 0 255 61 0 0 chr2 44569809 44569842 -206118012 + (TG)n Simple_repeat Simple_repeat 1 33 0 2424 68 0 3 chr2 44572593 44572904 -206114950 - AluSx SINE Alu 0 312 3 191 214 83 48 chr2 44573445 44573529 -206114325 - MER5A DNA MER1_type -76 113 27 542 237 135 0 chr2 44575051 44575136 -206112718 - MER5A DNA MER1_type -12 177 105 1525 181 3 72 chr2 44575136 44575467 -206112387 - AluJo SINE Alu -4 308 1 542 237 135 0 chr2 44575467 44575537 -206112317 - MER5A DNA MER1_type -84 105 1 368 282 61 49 chr2 44575537 44575655 -206112199 - MIR3 SINE MIR -56 152 33 1463 68 5 0 chr2 44577114 44577304 -206110550 - L1PA14 LINE L1 0 6161 5971 923 108 15 0 chr2 44577403 44577533 -206110321 + AluSq/x SINE Alu 1 132 -181 21 0 0 0 chr2 44578053 44578074 -206109780 + GC_rich Low_complexity Low_complexity 1 21 0 550 266 37 58 chr2 44578251 44578439 -206109415 - MIR SINE MIR -9 253 70 239 182 0 0 chr2 44578454 44578498 -206109356 + L2 LINE L2 3268 3311 -2 2080 114 10 0 chr2 44579191 44579488 -206108366 + AluSx SINE Alu 1 300 -12 641 350 110 6 chr2 44582062 44582408 -206105446 + L3 LINE CR1 623 1004 -573 313 248 25 96 chr2 44582428 44582490 -206105364 + MER5A DNA MER1_type 16 81 -108 2749 10 0 0 chr2 44582490 44582797 -206105057 + AluYa5 SINE Alu 1 307 -4 313 248 25 96 chr2 44582797 44582891 -206104963 + MER5A DNA MER1_type 81 161 -28 346 252 187 22 chr2 44583292 44583431 -206104423 + MIR SINE MIR 84 245 -17 192 245 19 19 chr2 44583399 44583452 -206104402 + L2 LINE L2 3219 3271 -1 * 195 162 0 0 chr2 44583471 44583508 -206104346 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 266 300 171 35 chr2 44583921 44584178 -206103676 - L2 LINE L2 -86 3186 2895 286 200 227 0 chr2 44585075 44585150 -206102704 + L2 LINE L2 3208 3299 -14 192 40 0 0 chr2 44585152 44585177 -206102677 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 230 227 0 30 chr2 44585184 44585250 -206102604 + (CATA)n Simple_repeat Simple_repeat 1 64 0 314 246 61 35 chr2 44585851 44585965 -206101889 + MIR SINE MIR 14 130 -132 1941 156 7 0 chr2 44586093 44586401 -206101453 - AluJb SINE Alu -26 286 1 2245 104 7 0 chr2 44586615 44586903 -206100951 + AluSx SINE Alu 1 290 -22 1870 236 59 17 chr2 44586908 44587437 -206100417 + L1ME3 LINE L1 5596 6146 -16 259 402 27 0 chr2 44588757 44588869 -206098985 - MIR SINE MIR -92 170 56 233 163 0 0 chr2 44588870 44588919 -206098935 + MER41A LTR ERV1 147 195 -359 323 232 66 67 chr2 44589013 44589168 -206098686 + MIR SINE MIR 8 161 -47 2327 75 7 20 chr2 44589619 44589925 -206097929 + AluY SINE Alu 1 302 -9 595 281 121 22 chr2 44590648 44590872 -206096982 - MIR SINE MIR -5 257 12 251 261 79 44 chr2 44591452 44591611 -206096243 - MIR SINE MIR -20 188 25 197 299 51 51 chr2 44593319 44593436 -206094418 - MIR3 SINE MIR -32 176 60 1697 198 82 86 chr2 44594202 44594827 -206093027 - MLT1E2 LTR MaLR 0 626 5 210 71 0 0 chr2 44594988 44595016 -206092838 + (TCC)n Simple_repeat Simple_repeat 2 29 0 237 303 10 40 chr2 44595330 44595429 -206092425 + L2 LINE L2 3164 3259 -13 2204 112 27 0 chr2 44595808 44596103 -206091751 - AluSx SINE Alu -9 303 1 886 253 78 20 chr2 44596871 44597164 -206090690 - L1ME3 LINE L1 -10 6152 5843 224 279 151 12 chr2 44597259 44597345 -206090509 - MIR SINE MIR -118 144 47 347 206 0 0 chr2 44597654 44597717 -206090137 - L2 LINE L2 0 3313 3251 629 258 62 147 chr2 44597721 44598257 -206089597 - MLT1H1 LTR MaLR -2 553 64 357 300 0 39 chr2 44598469 44598599 -206089255 - MIR SINE MIR -5 257 133 979 270 80 68 chr2 44598599 44598923 -206088931 - MLT1H1 LTR MaLR -3 549 231 2319 97 0 13 chr2 44598923 44599221 -206088633 - AluSq SINE Alu -19 294 1 979 270 80 68 chr2 44599221 44599446 -206088408 - MLT1H1 LTR MaLR -321 231 10 445 275 29 177 chr2 44599456 44599707 -206088147 - MLT1G1-int LTR MaLR 0 1371 1084 2293 122 0 0 chr2 44599707 44600011 -206087843 + AluSq SINE Alu 1 304 -9 445 275 29 177 chr2 44600011 44600287 -206087567 - MLT1G1-int LTR MaLR -287 1084 977 2165 103 57 17 chr2 44600287 44600637 -206087217 + THE1B LTR MaLR 1 364 0 445 275 29 177 chr2 44600637 44600831 -206087023 - MLT1G1-int LTR MaLR -394 977 756 781 96 0 0 chr2 44600989 44601093 -206086761 - U6 snRNA snRNA -3 104 1 2251 130 0 0 chr2 44601494 44601802 -206086052 - AluSx SINE Alu -4 308 1 282 290 79 19 chr2 44601802 44602067 -206085787 - MLT1G1-int LTR MaLR -946 425 10 1089 234 112 59 chr2 44602084 44602576 -206085278 - MLT1G1 LTR MaLR -5 590 73 467 289 8 8 chr2 44602592 44602713 -206085141 - MIR SINE MIR -140 122 2 2282 122 3 3 chr2 44603114 44603426 -206084428 - AluSx SINE Alu 0 312 1 541 286 0 37 chr2 44603738 44603899 -206083955 + MER91A DNA MER1_type 2 156 -40 1361 206 3 7 chr2 44654616 44654922 -206032932 - AluSq SINE Alu -8 305 1 2096 98 10 10 chr2 44654982 44655288 -206032566 - AluSq SINE Alu -7 306 1 1737 162 80 24 chr2 44655410 44655749 -206032105 - MER46B DNA MER2_type -3 233 1 4861 78 42 9 chr2 44656048 44656719 -206031135 - SVA Other Other 0 1386 694 1907 174 3 0 chr2 44657032 44657342 -206030512 + MER47B DNA MER2_type 104 414 -4 198 0 0 0 chr2 44657342 44657364 -206030490 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 261 0 0 0 chr2 44657363 44657392 -206030462 + (GA)n Simple_repeat Simple_repeat 1 29 0 1388 178 41 85 chr2 44657394 44657760 -206030094 - MLT2D LTR ERVL -64 350 1 886 209 59 19 chr2 44657895 44658230 -206029624 - MLT1H1 LTR MaLR 0 555 217 2123 47 0 4 chr2 44658640 44658897 -206028957 - AluY SINE Alu -24 287 32 198 0 0 0 chr2 44659543 44659565 -206028289 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 225 0 0 0 chr2 44659564 44659589 -206028265 + (CA)n Simple_repeat Simple_repeat 1 25 0 1911 92 78 18 chr2 44662069 44662352 -206025502 + AluSp SINE Alu 3 302 -11 462 280 104 21 chr2 44662354 44662547 -206025307 - MIR SINE MIR -10 252 44 2083 123 0 16 chr2 44662958 44663274 -206024580 + AluSp SINE Alu 2 312 -1 2202 103 0 31 chr2 44663310 44663631 -206024223 - AluY SINE Alu 0 311 1 256 322 83 0 chr2 44663747 44663868 -206023986 - MIR3 SINE MIR -65 143 13 2133 121 0 7 chr2 44663985 44664290 -206023564 + AluSq SINE Alu 1 303 -10 312 27 0 0 chr2 44665140 44665177 -206022677 + (CA)n Simple_repeat Simple_repeat 2 38 0 192 279 108 27 chr2 44666094 44666205 -206021649 + L2 LINE L2 3190 3309 -4 263 342 96 33 chr2 44666318 44666410 -206021444 + L2 LINE L2 2543 2628 -686 2232 95 3 0 chr2 44666410 44666706 -206021148 - AluSc SINE Alu -12 297 1 263 342 96 33 chr2 44666706 44666885 -206020969 + L2 LINE L2 2628 2831 -483 273 216 176 0 chr2 44666977 44667051 -206020803 + MIR SINE MIR 109 195 -67 1735 151 22 0 chr2 44667055 44667370 -206020484 - AluJb SINE Alu 0 321 1 363 185 0 0 chr2 44667397 44667462 -206020392 - MER2 DNA MER2_type 0 345 281 2086 122 0 10 chr2 44667898 44668229 -206019625 + AluSq SINE Alu 1 313 0 2099 116 6 31 chr2 44669915 44670235 -206017619 - AluSx SINE Alu 0 312 1 771 111 4 217 chr2 44672687 44672717 -206015137 - MER2 DNA MER2_type -139 206 171 1593 192 0 7 chr2 44672717 44673019 -206014835 + AluJo SINE Alu 3 302 -10 771 111 4 217 chr2 44673019 44673223 -206014631 - MER2 DNA MER2_type -174 171 22 226 288 76 17 chr2 44673510 44673628 -206014226 + L2 LINE L2 2970 3094 -178 677 258 48 5 chr2 44674860 44675046 -206012808 + MIR SINE MIR 18 211 -51 2080 108 0 40 chr2 44675063 44675388 -206012466 - AluSx SINE Alu 0 312 1 182 156 22 0 chr2 44675510 44675555 -206012299 + C-rich Low_complexity Low_complexity 3 48 0 440 330 45 0 chr2 44675903 44676082 -206011772 + MIR SINE MIR 40 226 -36 216 250 19 0 chr2 44676111 44676163 -206011691 + C-rich Low_complexity Low_complexity 1 53 0 192 339 34 42 chr2 44676371 44676489 -206011365 + MIR SINE MIR 21 137 -71 * 636 310 131 32 chr2 44676479 44677377 -206010477 - L2 LINE L2 0 3272 2296 824 204 0 0 chr2 44677556 44677708 -206010146 + FRAM SINE Alu 25 176 0 2131 101 3 13 chr2 44677743 44678049 -206009805 + AluSx SINE Alu 2 304 -8 206 345 0 0 chr2 44678052 44678107 -206009747 - MIR3 SINE MIR -45 163 109 220 312 86 21 chr2 44678452 44678545 -206009309 + MIR SINE MIR 13 111 -151 1472 128 4 8 chr2 44678559 44678794 -206009060 - AluSg/x SINE Alu -1 311 78 1623 76 9 0 chr2 44678809 44679020 -206008834 + AluSp SINE Alu 82 294 -19 851 194 40 23 chr2 44679156 44679331 -206008523 - MER3 DNA MER1_type -78 131 1 373 314 16 0 chr2 44680393 44680517 -206007337 - MIR SINE MIR -91 171 46 2182 93 10 6 chr2 44680607 44680918 -206006936 - AluSx SINE Alu 0 312 1 831 109 47 0 chr2 44681411 44681539 -206006315 - AluJo SINE Alu -178 134 1 260 216 14 0 chr2 44681937 44682011 -206005843 + (TG)n Simple_repeat Simple_repeat 1 75 0 2144 107 3 0 chr2 44682842 44683140 -206004714 + AluSx SINE Alu 1 299 -13 222 323 90 75 chr2 44683141 44683342 -206004512 - MIR SINE MIR -3 259 56 446 324 22 5 chr2 44683596 44683781 -206004073 + MIR SINE MIR 64 251 -11 241 231 202 29 chr2 44683825 44683929 -206003925 - MIR SINE MIR -58 150 29 1278 120 6 0 chr2 44684535 44684718 -206003136 - AluSx SINE Alu -116 196 13 2401 88 0 0 chr2 44685358 44685664 -206002190 + AluSx SINE Alu 1 306 -6 184 107 0 0 chr2 44685869 44685897 -206001957 - L2 LINE L2 -94 3219 3192 263 276 129 26 chr2 44685985 44686101 -206001753 + L2 LINE L2 2523 2650 -664 * 338 258 153 0 chr2 44686078 44686202 -206001652 + L2 LINE L2 2904 3046 -267 399 265 110 6 chr2 44686667 44686982 -206000872 + MLT1J2 LTR MaLR 5 382 -68 193 263 92 13 chr2 44687261 44687337 -206000517 + MIR SINE MIR 82 163 -99 305 230 0 90 chr2 44687406 44687506 -206000348 - MIR SINE MIR -105 157 67 870 315 54 41 chr2 44687513 44688395 -205999459 + L2 LINE L2 2371 3272 0 1244 171 55 126 chr2 44688457 44688583 -205999271 - MLT1B LTR MaLR 0 390 257 1982 107 17 17 chr2 44688583 44688874 -205998980 + AluSx SINE Alu 11 301 -11 1244 171 55 126 chr2 44688874 44689055 -205998799 - MLT1B LTR MaLR -133 257 118 2145 143 10 0 chr2 44689055 44689363 -205998491 - AluSx SINE Alu -1 311 1 1244 171 55 126 chr2 44689363 44689474 -205998380 - MLT1B LTR MaLR -272 118 1 2104 173 51 15 chr2 44689475 44689837 -205998017 - MLT1B-int LTR MaLR -1 1370 990 1989 130 0 25 chr2 44689837 44690121 -205997733 + AluJb SINE Alu 23 299 -13 2104 173 51 15 chr2 44690121 44690169 -205997685 - MLT1B-int LTR MaLR -381 990 945 394 214 0 12 chr2 44690308 44690392 -205997462 - MLT1B-int LTR MaLR -975 760 678 3861 153 45 14 chr2 44690449 44691221 -205996633 - MLT1-int LTR MaLR -484 887 1 336 115 0 0 chr2 44691221 44691273 -205996581 - MLT2B1 LTR ERVL 0 520 469 372 167 0 28 chr2 44691292 44691364 -205996490 + Tigger5 DNA MER2_type 7 76 -2247 1034 92 35 0 chr2 44691538 44691679 -205996175 - AluSg/x SINE Alu -14 296 151 432 67 89 100 chr2 44691754 44691844 -205996010 - MIR SINE MIR -89 173 85 693 178 46 33 chr2 44692233 44692385 -205995469 - MER5A DNA MER1_type -35 154 1 395 312 16 0 chr2 44692416 44692541 -205995313 - MER5B DNA MER1_type -49 129 3 225 314 71 50 chr2 44692805 44692945 -205994909 - L2 LINE L2 -30 3242 3100 268 280 193 7 chr2 44693040 44693190 -205994664 - MER5B DNA MER1_type 0 178 1 530 182 0 0 chr2 44693470 44693558 -205994296 - FLAM_A SINE Alu -51 91 4 985 200 0 0 chr2 44694165 44694335 -205993519 + FAM SINE Alu 1 170 -5 28 29 0 0 chr2 44694956 44694991 -205992863 + AT_rich Low_complexity Low_complexity 1 35 0 517 173 18 27 chr2 44695252 44695362 -205992492 - MER5A DNA MER1_type -69 120 12 2432 87 0 0 chr2 44696068 44696366 -205991488 - AluSx SINE Alu -14 298 1 195 39 176 0 chr2 44697277 44697328 -205990526 + CT-rich Low_complexity Low_complexity 1 60 0 * 283 117 0 33 chr2 44697325 44697385 -205990469 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 1515 148 19 98 chr2 44697389 44697707 -205990147 - AluJb SINE Alu -19 293 1 2667 271 39 30 chr2 44698423 44699469 -205988385 + L1ME LINE L1 36 1091 -5305 708 167 9 0 chr2 44699470 44699584 -205988270 + FLAM_C SINE Alu 2 116 -27 441 285 89 9 chr2 44699597 44699811 -205988043 + L1ME LINE L1 1077 1307 -5089 1913 179 10 0 chr2 44699818 44700126 -205987728 + AluJo SINE Alu 1 311 -1 1505 220 44 50 chr2 44700126 44700621 -205987233 + L1ME LINE L1 4981 5472 -743 1150 165 102 8 chr2 44700646 44700900 -205986954 + L1ME LINE L1 5606 5883 -352 4338 196 53 22 chr2 44700911 44701593 -205986261 + L1MB7 LINE L1 3858 4517 -1667 207 0 0 0 chr2 44701593 44701616 -205986238 + (TCCC)n Simple_repeat Simple_repeat 4 26 0 4338 196 53 22 chr2 44701616 44702290 -205985564 + L1MB7 LINE L1 4517 5169 -1015 2395 93 3 0 chr2 44702290 44702591 -205985263 + AluSq SINE Alu 1 302 -11 4338 196 53 22 chr2 44702591 44703195 -205984659 + L1MB7 LINE L1 5169 5944 -240 339 123 4 0 chr2 44703295 44703358 -205984496 + Alu SINE Alu 1 46 -254 2362 98 3 0 chr2 44703953 44704249 -205983605 - AluSx SINE Alu -15 297 1 1494 169 44 44 chr2 44704314 44704610 -205983244 - AluJb SINE Alu -16 296 1 482 134 71 49 chr2 44705558 44705578 -205982276 - L1MC3 LINE L1 0 7785 7767 1962 154 34 3 chr2 44705578 44705876 -205981978 + AluJb SINE Alu 2 308 -4 482 134 71 49 chr2 44705876 44706347 -205981507 - L1MC3 LINE L1 -18 7767 7307 2402 101 0 0 chr2 44706347 44706645 -205981209 - AluSx SINE Alu -10 302 5 482 134 71 49 chr2 44706645 44706822 -205981032 - L1MC3 LINE L1 -478 7307 5661 2015 142 0 10 chr2 44706823 44707118 -205980736 - AluJb SINE Alu 0 312 21 323 301 71 19 chr2 44707204 44707358 -205980496 + MIR SINE MIR 22 146 -62 1966 102 25 74 chr2 44708145 44708469 -205979385 + AluSg SINE Alu 1 308 -2 1815 145 6 81 chr2 44708682 44709014 -205978840 - AluSx SINE Alu -5 307 1 1938 143 0 17 chr2 44709149 44709473 -205978381 - AluJb SINE Alu 0 319 1 185 211 58 0 chr2 44709607 44709659 -205978195 - MIR SINE MIR -126 136 82 2278 116 0 19 chr2 44710553 44710871 -205976983 + AluSx SINE Alu 1 312 0 244 265 165 35 chr2 44711518 44711688 -205976166 - L2 LINE L2 -91 3222 3031 2367 101 0 0 chr2 44711789 44712087 -205975767 + AluSx SINE Alu 1 298 -14 926 121 0 0 chr2 44712090 44712214 -205975640 - AluJo/FLAM SINE Alu -188 124 1 2388 96 0 3 chr2 44713427 44713729 -205974125 - AluSq SINE Alu -12 301 1 339 239 94 14 chr2 44714097 44714235 -205973619 + MIR3 SINE MIR 42 190 -18 319 175 181 175 chr2 44714477 44714600 -205973254 + MER45A DNA AcHobo 1 127 -1454 2305 118 0 0 chr2 44714600 44714905 -205972949 - AluSx SINE Alu 0 312 8 319 175 181 175 chr2 44714905 44714958 -205972896 + MER45A DNA AcHobo 127 178 0 1849 204 0 0 chr2 44716092 44716401 -205971453 - AluJo SINE Alu -2 310 2 2016 108 51 0 chr2 44716409 44716704 -205971150 - AluSx SINE Alu -2 310 1 2292 88 3 0 chr2 44717637 44717951 -205969903 - AluSx SINE Alu 0 315 1 2453 100 0 0 chr2 44718692 44719001 -205968853 + AluSx SINE Alu 2 310 -2 736 220 95 15 chr2 44720717 44720917 -205966937 - MER20 DNA MER1_type 0 219 4 725 281 113 30 chr2 44720918 44721281 -205966573 - LTR33 LTR ERVL -96 425 33 1944 168 10 3 chr2 44721375 44721679 -205966175 + AluJb SINE Alu 1 306 -6 360 261 45 60 chr2 44721695 44721829 -205966025 + MIR SINE MIR 33 164 -98 519 282 29 65 chr2 44722323 44722568 -205965286 - MER102b DNA MER1_type 0 341 106 1874 160 13 3 chr2 44722776 44723076 -205964778 + AluJb SINE Alu 2 304 -8 195 129 0 0 chr2 44724285 44724316 -205963538 + (TGGG)n Simple_repeat Simple_repeat 2 32 0 2332 177 35 11 chr2 44725367 44725985 -205961869 - L1MB7 LINE L1 -357 5827 5114 189 107 0 0 chr2 44725985 44726013 -205961841 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 2509 96 0 3 chr2 44726015 44726328 -205961526 - AluSx SINE Alu 0 312 1 490 194 0 0 chr2 44726341 44726444 -205961410 - L1MB7 LINE L1 -1016 5130 5028 2341 80 7 10 chr2 44726465 44726764 -205961090 + AluSg SINE Alu 1 298 -12 2091 129 26 0 chr2 44726882 44727184 -205960670 + AluSx SINE Alu 1 310 -2 2214 101 3 35 chr2 44727189 44727505 -205960349 + AluSq SINE Alu 7 312 -1 1809 164 0 32 chr2 44727509 44727821 -205960033 + AluJb SINE Alu 1 302 -10 340 299 45 15 chr2 44727980 44728114 -205959740 + MIR SINE MIR 117 254 -8 1916 97 4 0 chr2 44728204 44728441 -205959413 + AluSx SINE Alu 2 239 -73 300 306 34 2 chr2 44729429 44729549 -205958305 - MIR SINE MIR -71 137 29 860 244 152 11 chr2 44729618 44729901 -205957953 + MER58B DNA MER1_type 19 341 0 405 276 86 52 chr2 44730381 44730418 -205957436 - MER91A DNA MER1_type -13 183 149 2408 103 0 3 chr2 44730418 44730728 -205957126 + AluSx SINE Alu 1 309 -3 405 276 86 52 chr2 44730728 44730864 -205956990 - MER91A DNA MER1_type -47 149 4 346 217 0 0 chr2 44731326 44731395 -205956459 - MER5A DNA MER1_type -80 109 41 1788 134 57 11 chr2 44732761 44733044 -205954810 - AluJb SINE Alu -16 296 1 2208 101 0 20 chr2 44733331 44733629 -205954225 - AluSg SINE Alu -13 297 6 242 282 24 0 chr2 44734161 44734246 -205953608 + L2 LINE L2 2967 3053 -219 2319 101 7 0 chr2 44734271 44734567 -205953287 + AluSx SINE Alu 1 298 -14 1266 117 0 11 chr2 44734568 44734748 -205953106 + AluSg/x SINE Alu 135 312 0 282 277 84 34 chr2 44734779 44734898 -205952956 - MIR SINE MIR -21 241 117 2058 102 33 0 chr2 44734898 44735216 -205952638 + AluSx SINE Alu 1 327 0 518 220 30 0 chr2 44735238 44735338 -205952516 + MER81 DNA DNA 11 113 -1 190 188 0 188 chr2 44735848 44735889 -205951965 - MIR SINE MIR -109 153 134 2421 72 6 37 chr2 44735889 44736210 -205951644 + AluY SINE Alu 1 311 0 190 188 0 188 chr2 44736210 44736253 -205951601 - MIR SINE MIR -128 134 85 262 270 86 29 chr2 44736664 44736838 -205951016 + L2 LINE L2 2870 3053 -219 709 252 44 34 chr2 44736877 44737083 -205950771 - MIR SINE MIR -21 241 34 2249 121 0 19 chr2 44737297 44737610 -205950244 + AluSg SINE Alu 1 307 -3 561 245 29 0 chr2 44738792 44738931 -205948923 - MIR SINE MIR -70 192 50 429 237 92 26 chr2 44740170 44740322 -205947532 - MIR SINE MIR -40 222 61 720 35 0 0 chr2 44740446 44740533 -205947321 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 2427 80 0 20 chr2 44740729 44741029 -205946825 - AluSg SINE Alu -15 295 2 236 30 30 0 chr2 44741061 44741094 -205946760 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 2088 132 26 0 chr2 44741096 44741399 -205946455 - AluSx SINE Alu -1 311 1 358 287 149 11 chr2 44741712 44741886 -205945968 + MIR SINE MIR 28 225 -37 458 285 31 8 chr2 44742780 44742910 -205944944 + L2 LINE L2 3181 3313 0 198 118 0 0 chr2 44742912 44742946 -205944908 + (CA)n Simple_repeat Simple_repeat 1 34 0 215 289 26 0 chr2 44743756 44743912 -205943942 + (CAGA)n Simple_repeat Simple_repeat 2 161 0 429 330 35 0 chr2 44743926 44744144 -205943710 + (CGGA)n Simple_repeat Simple_repeat 1 225 0 192 77 0 0 chr2 44744491 44744517 -205943337 + (CA)n Simple_repeat Simple_repeat 1 26 0 650 247 12 105 chr2 44745665 44745865 -205941989 - MIR SINE MIR -38 224 7 2320 110 3 0 chr2 44745865 44746166 -205941688 - AluSx SINE Alu -10 302 1 650 247 12 105 chr2 44746166 44746177 -205941677 - MIR SINE MIR -255 7 36 2177 75 57 0 chr2 44746177 44746456 -205941398 - AluSg SINE Alu -15 295 1 650 247 12 105 chr2 44746456 44746490 -205941364 - MIR SINE MIR -225 37 1 1611 133 144 4 chr2 44746534 44746797 -205941057 + AluJb SINE Alu 1 300 -12 180 97 0 0 chr2 44747985 44748016 -205939838 + (CA)n Simple_repeat Simple_repeat 1 31 0 189 107 0 0 chr2 44748263 44748291 -205939563 + (TC)n Simple_repeat Simple_repeat 1 28 0 2160 105 10 20 chr2 44748804 44749109 -205938745 + AluJb SINE Alu 1 302 -10 2228 108 0 0 chr2 44749548 44749845 -205938009 - AluY SINE Alu -14 297 1 360 0 0 0 chr2 44750087 44750127 -205937727 + (TG)n Simple_repeat Simple_repeat 1 40 0 283 276 90 37 chr2 44750506 44750610 -205937244 - MIR SINE MIR -61 147 32 2368 75 0 0 chr2 44750610 44750902 -205936952 - AluSx SINE Alu -20 292 1 283 276 90 37 chr2 44750902 44750932 -205936922 - MIR SINE MIR -176 32 5 325 257 54 54 chr2 44751963 44752111 -205935743 + MIR3 SINE MIR 39 186 -22 369 0 0 0 chr2 44752347 44752388 -205935466 + (TG)n Simple_repeat Simple_repeat 2 42 0 529 265 26 26 chr2 44752853 44753004 -205934850 - MIR SINE MIR -38 224 74 249 245 49 59 chr2 44753031 44753133 -205934721 - Charlie7 DNA MER1_type 0 2612 2512 204 293 60 60 chr2 44753264 44753391 -205934463 - L2 LINE L2 -236 3036 2907 1914 146 3 27 chr2 44753391 44753692 -205934162 + AluJb SINE Alu 1 294 -18 204 293 60 60 chr2 44753692 44753714 -205934140 - L2 LINE L2 -364 2908 2887 249 195 0 0 chr2 44753786 44753827 -205934027 + L2 LINE L2 3221 3261 -11 189 143 12 191 chr2 44754179 44754263 -205933591 - MIR SINE MIR -36 226 158 976 235 22 86 chr2 44754263 44754328 -205933526 - MLT1I LTR MaLR 0 409 341 1354 143 128 59 chr2 44754328 44754601 -205933253 - AluJo SINE Alu -20 292 1 976 235 22 86 chr2 44754601 44754897 -205932957 - MLT1I LTR MaLR -68 341 71 2470 65 6 43 chr2 44755589 44755911 -205931943 + AluSg SINE Alu 1 310 0 2115 88 0 15 chr2 44755945 44756217 -205931637 + AluSx SINE Alu 35 302 -10 2380 67 0 3 chr2 44756220 44756591 -205931263 + AluY SINE Alu 1 370 0 690 126 68 0 chr2 44756597 44756700 -205931154 + AluJb SINE Alu 9 118 -194 2223 124 0 0 chr2 44756743 44757041 -205930813 - AluSx SINE Alu -14 298 1 32 26 0 0 chr2 44757043 44757082 -205930772 + AT_rich Low_complexity Low_complexity 1 39 0 326 266 127 0 chr2 44757344 44757497 -205930357 + MIR SINE MIR 9 184 -73 2248 128 0 3 chr2 44758596 44758902 -205928952 - AluSx SINE Alu -7 305 1 994 208 77 0 chr2 44760164 44760371 -205927483 + MER58A DNA MER1_type 1 223 -1 2209 116 0 35 chr2 44761002 44761320 -205926534 + AluSc SINE Alu 1 307 -2 2236 104 20 3 chr2 44762088 44762387 -205925467 - AluSp SINE Alu -9 304 1 1799 172 11 7 chr2 44762430 44762715 -205925139 - AluJb SINE Alu -21 291 6 216 246 0 35 chr2 44763135 44763192 -205924662 + L2 LINE L2 3138 3192 -80 22 0 0 0 chr2 44763382 44763404 -205924450 + AT_rich Low_complexity Low_complexity 1 22 0 1723 127 223 17 chr2 44763605 44763960 -205923894 + MSTA LTR MaLR 1 428 0 10042 132 7 35 chr2 44763962 44764547 -205923307 + MSTA-int LTR MaLR 3 603 -977 2266 128 0 0 chr2 44764547 44764845 -205923009 + AluSq SINE Alu 1 298 -15 10042 132 7 35 chr2 44764845 44765883 -205921971 + MSTA-int LTR MaLR 603 1580 0 1964 122 173 35 chr2 44765883 44766218 -205921636 + MSTA LTR MaLR 1 395 -33 2227 85 53 0 chr2 44766218 44766501 -205921353 - AluSp SINE Alu -15 298 1 1964 122 173 35 chr2 44766501 44766541 -205921313 + MSTA LTR MaLR 395 428 0 430 285 101 14 chr2 44766560 44766767 -205921087 + L2 LINE L2 2406 2630 -684 405 352 46 28 chr2 44766876 44767111 -205920743 - L2 LINE L2 -458 2856 2614 2017 117 58 0 chr2 44767111 44767385 -205920469 + AluSq SINE Alu 3 292 -21 405 352 46 28 chr2 44767385 44767433 -205920421 - L2 LINE L2 -700 2614 2568 2017 144 7 13 chr2 44767949 44768247 -205919607 - AluSx SINE Alu -16 296 1 907 276 26 16 chr2 44768377 44768688 -205919166 + MLT1J LTR MaLR 46 359 -152 2110 128 3 0 chr2 44768787 44769084 -205918770 + AluSx SINE Alu 1 298 -14 789 219 30 82 chr2 44769149 44769418 -205918436 - MER21B LTR ERV1 -379 484 230 2408 161 4 42 chr2 44769420 44769892 -205917962 - L1MB7 LINE L1 0 6184 5731 2122 119 0 7 chr2 44770286 44770604 -205917250 - AluSx SINE Alu 0 316 1 2203 123 16 3 chr2 44770614 44770922 -205916932 - AluSx SINE Alu 0 312 1 283 289 183 66 chr2 44771150 44771347 -205916507 + L2 LINE L2 3029 3248 -24 2490 73 0 13 chr2 44771818 44772133 -205915721 + AluSq SINE Alu 1 311 -2 202 295 158 0 chr2 44773020 44773115 -205914739 - MIR SINE MIR -79 129 20 940 279 251 56 chr2 44774158 44774854 -205913000 - L3 LINE CR1 -6 1571 740 182 179 0 26 chr2 44774867 44774906 -205912948 - MIR SINE MIR -3 259 222 448 314 118 35 chr2 44775055 44775393 -205912461 - L2 LINE L2 -353 2961 2596 636 162 4 2 chr2 44775627 44775867 -205911987 + AluJb SINE Alu 1 287 -25 614 317 58 44 chr2 44775893 44776237 -205911617 - L3 LINE CR1 -883 694 346 2462 74 3 0 chr2 44776569 44776867 -205910987 - AluSg SINE Alu -11 299 1 2309 112 0 0 chr2 44776922 44777226 -205910628 - AluSx SINE Alu -8 304 1 2865 83 25 92 chr2 44777553 44778369 -205909485 + SVA Other Other 393 868 -520 1178 38 5 38 chr2 44778386 44778595 -205909259 + SVA Other Other 665 866 -520 28 95 0 0 chr2 44778610 44778694 -205909160 + GC_rich Low_complexity Low_complexity 1 84 0 1147 117 48 91 chr2 44778807 44779038 -205908816 + AluJo SINE Alu 82 302 -10 293 270 68 0 chr2 44779181 44779255 -205908599 + MIR SINE MIR 28 106 -102 388 228 265 31 chr2 44780700 44780862 -205906992 + MIR SINE MIR 63 262 0 300 284 110 9 chr2 44782067 44782176 -205905678 - L1ME4a LINE L1 -40 6081 5962 1913 169 0 13 chr2 44782262 44782576 -205905278 - AluJo SINE Alu -2 310 1 308 335 39 26 chr2 44782898 44783053 -205904801 + L2 LINE L2 2934 3090 -182 2201 113 3 0 chr2 44783456 44783748 -205904106 + AluSp SINE Alu 1 293 -20 723 234 92 44 chr2 44783752 44783979 -205903875 - MIR SINE MIR 0 262 25 209 237 258 21 chr2 44784171 44784264 -205903590 - L2 LINE L2 -7 3306 3192 238 246 0 0 chr2 44784475 44784532 -205903322 + MARNA DNA Mariner 314 370 -216 1716 170 11 11 chr2 44784838 44785150 -205902704 - AluJo SINE Alu 0 312 1 1142 170 42 23 chr2 44785151 44785416 -205902438 - MER33 DNA MER1_type -54 270 1 505 204 10 0 chr2 44786049 44786147 -205901707 + MER94 DNA DNA 4 102 -32 231 309 238 8 chr2 44788075 44788201 -205899653 + MIR SINE MIR 6 160 -102 969 244 70 11 chr2 44788202 44788473 -205899381 + MSTD LTR MaLR 1 287 -109 233 88 0 0 chr2 44788498 44788532 -205899322 + MSTD LTR MaLR 424 457 0 987 119 15 0 chr2 44788854 44788988 -205898866 - AluSg/x SINE Alu -20 292 157 2229 117 0 13 chr2 44789034 44789368 -205898486 + AluSx SINE Alu 3 312 0 932 183 0 0 chr2 44789368 44789510 -205898344 + AluSg/x SINE Alu 132 273 -37 204 40 0 0 chr2 44789514 44789539 -205898315 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 2597 48 3 3 chr2 44789662 44789972 -205897882 - AluY SINE Alu -1 310 1 306 261 45 9 chr2 44790004 44790115 -205897739 - L1MC4a LINE L1 -1877 5931 5817 1436 160 4 17 chr2 44790116 44790347 -205897507 - AluJo SINE Alu 0 312 85 267 54 0 0 chr2 44790714 44790751 -205897103 + (CCAA)n Simple_repeat Simple_repeat 2 38 0 348 286 8 25 chr2 44792324 44792443 -205895411 - L2 LINE L2 -4 3268 3152 311 150 17 0 chr2 44792508 44792568 -205895286 + GA-rich Low_complexity Low_complexity 3 63 0 263 224 0 0 chr2 44794265 44794302 -205893552 + AluSq/x SINE Alu 85 124 -179 216 0 0 0 chr2 44794302 44794326 -205893528 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 263 224 0 0 chr2 44794326 44794346 -205893508 + AluSq/x SINE Alu 123 142 -161 436 294 130 0 chr2 44794482 44794666 -205893188 + MIR SINE MIR 53 260 -2 604 211 103 36 chr2 44794792 44794986 -205892868 - MIR SINE MIR -36 226 20 257 136 0 0 chr2 44795030 44795074 -205892780 - AluJb SINE Alu -6 295 252 940 154 0 18 chr2 44795074 44795117 -205892737 - AluJb SINE Alu -146 166 124 2249 106 0 0 chr2 44795117 44795418 -205892436 + AluSg SINE Alu 1 301 -9 940 154 0 18 chr2 44795418 44795543 -205892311 - AluJb SINE Alu -188 124 1 2306 100 7 0 chr2 44795680 44795989 -205891865 + AluSx SINE Alu 1 311 -1 622 131 228 49 chr2 44795992 44796184 -205891670 + L1MB7 LINE L1 5668 5898 -256 297 220 11 16 chr2 44797587 44797779 -205890075 + (CA)n Simple_repeat Simple_repeat 1 190 0 382 259 9 5 chr2 44797855 44798074 -205889780 + (CA)n Simple_repeat Simple_repeat 1 220 0 271 0 51 0 chr2 44798317 44798356 -205889498 + (CA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr2 44802788 44802809 -205885045 + AT_rich Low_complexity Low_complexity 1 21 0 28 71 0 0 chr2 44803228 44803284 -205884570 + GC_rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 44803289 44803310 -205884544 + (CTG)n Simple_repeat Simple_repeat 1 21 0 195 173 0 0 chr2 44803569 44803621 -205884233 + GA-rich Low_complexity Low_complexity 2 53 0 29 28 0 0 chr2 44805221 44805257 -205882597 + GC_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr2 44805335 44805359 -205882495 + GC_rich Low_complexity Low_complexity 1 24 0 30 0 0 0 chr2 44805491 44805521 -205882333 + GC_rich Low_complexity Low_complexity 1 30 0 313 364 35 7 chr2 44806741 44806884 -205880970 + MIR SINE MIR 21 146 -62 750 155 197 0 chr2 44807842 44807984 -205879870 - FAM SINE Alu -5 170 1 192 40 0 0 chr2 44808475 44808500 -205879354 + (GA)n Simple_repeat Simple_repeat 1 25 0 186 71 0 0 chr2 44808499 44808527 -205879327 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 2068 78 3 14 chr2 44808527 44808811 -205879043 - AluSg1 SINE Alu -28 281 1 2494 71 0 0 chr2 44810846 44811157 -205876697 - AluY SINE Alu 0 311 1 1417 140 199 7 chr2 44811980 44812266 -205875588 - MER58B DNA MER1_type 0 341 1 196 315 148 0 chr2 44812759 44812867 -205874987 - MIR SINE MIR -17 245 122 1819 111 21 90 chr2 44813317 44813650 -205874204 - AluSx SINE Alu 0 312 3 2064 125 0 0 chr2 44813662 44813959 -205873895 - AluSx SINE Alu -15 297 1 2181 105 7 0 chr2 44813965 44814271 -205873583 - AluSp SINE Alu -5 308 1 2410 47 0 10 chr2 44814492 44814788 -205873066 - AluY SINE Alu -18 293 1 429 176 0 0 chr2 44815255 44815323 -205872531 + AluJ/FLAM SINE Alu 2 69 -243 1254 155 30 125 chr2 44815342 44815459 -205872395 + L1M4 LINE L1 4657 4783 -1363 2381 55 0 32 chr2 44815459 44815769 -205872085 + AluY SINE Alu 1 300 -11 1254 155 30 125 chr2 44815769 44816044 -205871810 + L1M4 LINE L1 4783 5012 -1134 1951 143 14 0 chr2 44816313 44816606 -205871248 - AluSx SINE Alu -15 297 1 476 317 5 55 chr2 44817031 44817230 -205870624 - MIR SINE MIR -50 212 24 252 292 15 0 chr2 44817240 44817305 -205870549 - L2 LINE L2 -7 3306 3241 878 148 0 3 chr2 44817352 44817712 -205870142 + (CA)n Simple_repeat Simple_repeat 1 358 0 2354 73 3 0 chr2 44818312 44818613 -205869241 + AluSp SINE Alu 1 302 -11 2153 99 3 7 chr2 44818819 44819122 -205868732 + AluSx SINE Alu 1 302 -10 544 298 147 30 chr2 44819283 44819872 -205867982 + L1ME4a LINE L1 5355 5933 -188 2089 134 0 0 chr2 44819914 44820219 -205867635 - AluSx SINE Alu -7 305 1 22 0 0 0 chr2 44820219 44820241 -205867613 + AT_rich Low_complexity Low_complexity 1 22 0 219 114 0 0 chr2 44820322 44820357 -205867497 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 1736 167 10 13 chr2 44820392 44820697 -205867157 + AluJo SINE Alu 1 304 -8 1635 124 109 0 chr2 44820697 44821006 -205866848 + AluSx SINE Alu 1 312 0 198 328 16 0 chr2 44821276 44821337 -205866517 + L2 LINE L2 3247 3308 -5 478 198 58 41 chr2 44821436 44821557 -205866297 + MER91C DNA MER1_type 1 123 -17 307 282 0 0 chr2 44821773 44821851 -205866003 + MIR SINE MIR 67 144 -118 294 301 12 0 chr2 44822092 44822175 -205865679 + MIR3 SINE MIR 77 160 -48 1910 103 81 0 chr2 44822199 44822472 -205865382 + AluSx SINE Alu 1 295 -17 951 201 19 115 chr2 44822649 44823041 -205864813 - L1MD3 LINE L1 0 8040 7599 1571 156 59 4 chr2 44823249 44823519 -205864335 + AluJb SINE Alu 14 298 -14 2032 123 0 0 chr2 44823793 44824102 -205863752 - AluSx SINE Alu 0 309 1 548 243 236 40 chr2 44824129 44824549 -205863305 + LTR67 LTR ERVL 49 550 -7 2204 109 3 10 chr2 44824918 44825231 -205862623 - AluSx SINE Alu -1 311 1 404 360 0 7 chr2 44825292 44825431 -205862423 - MIR SINE MIR -111 151 14 915 119 41 128 chr2 44825490 44825558 -205862296 - MER2 DNA MER2_type -1 344 272 2136 119 13 10 chr2 44825558 44825869 -205861985 + AluSx SINE Alu 1 312 0 1564 136 12 16 chr2 44825874 44826124 -205861730 + AluJb SINE Alu 42 290 -22 915 119 41 128 chr2 44826124 44826292 -205861562 - MER2 DNA MER2_type -77 268 123 2063 107 0 0 chr2 44826294 44826585 -205861269 + AluSx SINE Alu 1 291 -21 263 247 34 11 chr2 44826585 44826674 -205861180 + MLT1L LTR MaLR 521 611 -4 193 347 14 14 chr2 44827248 44827320 -205860534 + MIR SINE MIR 20 91 -171 550 248 51 0 chr2 44827332 44827469 -205860385 - MLT1G1 LTR MaLR -5 590 447 1583 183 25 0 chr2 44827491 44827770 -205860084 - AluJo SINE Alu -26 286 1 353 214 122 20 chr2 44827777 44827875 -205859979 + MER45B DNA AcHobo 127 234 -806 2097 186 30 23 chr2 44827875 44827982 -205859872 + MER45B DNA AcHobo 554 659 -922 2011 97 23 39 chr2 44827982 44828292 -205859562 + AluSq SINE Alu 1 305 -8 2097 186 30 23 chr2 44828292 44828658 -205859196 + MER45B DNA AcHobo 659 1030 -10 589 164 15 65 chr2 44828669 44828782 -205859072 - MLT1H LTR MaLR -339 210 73 348 24 0 0 chr2 44828782 44828823 -205859031 + (TG)n Simple_repeat Simple_repeat 1 41 0 589 164 15 65 chr2 44828823 44828862 -205858992 - MLT1H LTR MaLR -476 73 34 211 242 233 0 chr2 44828934 44829054 -205858800 + MIR SINE MIR 108 255 -7 2018 111 3 33 chr2 44829062 44829369 -205858485 - AluSx SINE Alu -14 298 1 973 269 186 25 chr2 44829428 44830123 -205857731 - L2 LINE L2 -2 3311 2504 692 262 39 102 chr2 44831598 44831861 -205855993 + L2 LINE L2 2916 3194 -119 1678 129 98 11 chr2 44831861 44832148 -205855706 + AluJo SINE Alu 1 312 0 692 262 39 102 chr2 44832148 44832207 -205855647 + L2 LINE L2 3194 3209 -104 2385 87 0 0 chr2 44832207 44832517 -205855337 - AluSq SINE Alu -3 310 1 692 262 39 102 chr2 44832517 44832605 -205855249 + L2 LINE L2 3209 3301 -12 402 272 283 11 chr2 44833510 44833690 -205854164 + MIR SINE MIR 33 261 -1 182 297 50 40 chr2 44833766 44833867 -205853987 - MER5A DNA MER1_type -7 182 81 245 285 200 8 chr2 44834074 44834204 -205853650 + MIR SINE MIR 108 262 0 495 145 0 0 chr2 44834733 44834816 -205853038 + (CACCT)n Simple_repeat Simple_repeat 3 85 0 481 286 137 11 chr2 44834832 44835014 -205852840 - MIR SINE MIR -10 252 48 731 263 133 24 chr2 44835225 44835518 -205852336 + L2 LINE L2 2989 3313 0 296 236 14 0 chr2 44835655 44835727 -205852127 - MER91B DNA MER1_type -116 74 2 1867 126 0 0 chr2 44838152 44838421 -205849433 - AluSx SINE Alu -7 305 37 391 259 22 22 chr2 44839217 44839356 -205848498 + MIR SINE MIR 39 177 -85 240 111 0 0 chr2 44839830 44839866 -205847988 + MIR SINE MIR 118 153 -109 1267 160 18 18 chr2 44841178 44841397 -205846457 + MER20 DNA MER1_type 1 219 0 259 219 219 0 chr2 44841668 44841741 -205846113 + MIR3 SINE MIR 114 202 -6 534 291 13 0 chr2 44842661 44842812 -205845042 + MIR SINE MIR 102 254 -8 198 281 10 62 chr2 44843576 44843672 -205844182 - MIR3 SINE MIR -21 187 97 700 103 41 20 chr2 44843859 44844005 -205843849 - MER53 DNA DNA -38 151 3 1422 240 78 21 chr2 44844467 44844900 -205842954 - Charlie4a DNA MER1_type -8 500 43 183 265 41 0 chr2 44845988 44846037 -205841817 + MER5A DNA MER1_type 60 110 -79 186 133 0 0 chr2 44846248 44846278 -205841576 + (GGGTG)n Simple_repeat Simple_repeat 4 33 0 277 70 0 0 chr2 44846668 44846711 -205841143 - AluSx SINE Alu -4 298 256 210 37 0 0 chr2 44846811 44846838 -205841016 + (GA)n Simple_repeat Simple_repeat 2 28 0 2149 105 0 7 chr2 44846838 44847115 -205840739 - AluSx SINE Alu -34 278 4 311 339 33 70 chr2 44847579 44847678 -205840176 + L2 LINE L2 2525 2626 -688 1870 159 7 17 chr2 44847678 44847973 -205839881 - AluJb SINE Alu -20 292 1 311 339 33 70 chr2 44847973 44848115 -205839739 + L2 LINE L2 2626 2757 -557 2958 143 57 16 chr2 44848583 44849143 -205838711 + L1MB5 LINE L1 5584 6166 -8 762 171 8 0 chr2 44849169 44849337 -205838517 + FLAM_C SINE Alu 1 169 0 217 349 41 35 chr2 44850743 44850912 -205836942 + L2 LINE L2 684 853 -2461 329 248 152 16 chr2 44850955 44851080 -205836774 - MIR SINE MIR -10 252 111 358 299 142 37 chr2 44851948 44852349 -205835505 + L2 LINE L2 1785 2227 -1087 982 253 72 84 chr2 44852491 44853072 -205834782 + MLT1K LTR MaLR 5 578 -10 831 121 0 9 chr2 44854815 44854931 -205832923 + FLAM_C SINE Alu 3 117 -16 1331 181 43 63 chr2 44855006 44855177 -205832677 - AluJb SINE Alu -15 297 133 198 0 0 0 chr2 44855177 44855199 -205832655 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1331 181 43 63 chr2 44855199 44855326 -205832528 - AluJb SINE Alu -179 133 5 879 190 0 0 chr2 44855328 44855465 -205832389 - AluJo SINE Alu -175 137 1 202 183 398 11 chr2 44855505 44855598 -205832256 - MIR SINE MIR -61 147 19 792 132 34 117 chr2 44856698 44856827 -205831027 - MER53 DNA DNA 0 189 82 2404 106 3 0 chr2 44856827 44857139 -205830715 + AluSp SINE Alu 1 313 0 792 132 34 117 chr2 44857139 44857214 -205830640 - MER53 DNA DNA -107 82 2 929 271 92 5 chr2 44858190 44858559 -205829295 - L1MC4a LINE L1 -1910 5898 5498 1222 119 0 0 chr2 44858575 44858735 -205829119 - AluSg/x SINE Alu -17 293 134 581 131 12 0 chr2 44858735 44858819 -205829035 - AluJ/FLAM SINE Alu -226 86 2 272 242 95 57 chr2 44858825 44859036 -205828818 - L1MC4a LINE L1 -2326 5482 5264 439 86 0 0 chr2 44859064 44859122 -205828732 + FLAM_A SINE Alu 19 76 -56 457 357 117 27 chr2 44859137 44859658 -205828196 - L1M4 LINE L1 -3145 3001 2434 258 258 17 17 chr2 44859669 44859789 -205828065 - L1M4 LINE L1 -3733 2413 2294 1615 124 0 0 chr2 44859799 44860016 -205827838 - AluSg/x SINE Alu -1 311 95 1793 95 0 99 chr2 44860028 44860214 -205827640 - AluSx SINE Alu -18 294 146 2318 107 3 3 chr2 44860214 44860522 -205827332 - AluSq SINE Alu -4 309 2 1793 95 0 99 chr2 44860522 44860629 -205827225 - AluSx SINE Alu -166 146 30 804 277 63 58 chr2 44860707 44861154 -205826700 + MLT1J LTR MaLR 39 487 -24 517 250 173 13 chr2 44861344 44861500 -205826354 + MER5A DNA MER1_type 9 189 0 272 283 78 74 chr2 44861920 44862164 -205825690 + MLT1L LTR MaLR 197 441 -174 1297 65 12 6 chr2 44862325 44862494 -205825360 - L1PA10 LINE L1 -12 6156 5987 2448 93 3 0 chr2 44862859 44863171 -205824683 - AluSp SINE Alu 0 313 1 549 0 0 0 chr2 44864517 44864578 -205823276 + (CA)n Simple_repeat Simple_repeat 2 62 0 2320 82 0 38 chr2 44864896 44865211 -205822643 + AluY SINE Alu 1 303 -8 182 296 0 42 chr2 44865917 44865988 -205821866 + L2 LINE L2 3184 3251 -21 464 332 79 3 chr2 44866039 44866426 -205821428 + MLT1J LTR MaLR 20 463 -48 392 210 76 34 chr2 44868728 44868847 -205819007 + MIR SINE MIR 16 139 -69 344 329 7 7 chr2 44869166 44869303 -205818551 + MIR SINE MIR 21 157 -105 843 203 6 6 chr2 44869307 44869470 -205818384 + FAM SINE Alu 1 47 -2 998 243 160 50 chr2 44870085 44870199 -205817655 - L2 LINE L2 0 3313 3213 2531 73 7 0 chr2 44870199 44870501 -205817353 - AluSx SINE Alu -8 304 1 998 243 160 50 chr2 44870501 44871021 -205816833 - L2 LINE L2 -100 3213 2580 245 250 67 0 chr2 44871017 44871077 -205816777 + L2 LINE L2 3249 3312 -1 * 1297 141 9 5 chr2 44921162 44921375 -205766479 + AluSg/x SINE Alu 97 310 0 189 0 0 0 chr2 44921417 44921438 -205766416 + (A)n Simple_repeat Simple_repeat 1 21 0 1855 159 62 19 chr2 44921438 44921808 -205766046 - MSTB LTR MaLR -40 386 1 2326 108 0 13 chr2 44922088 44922404 -205765450 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 44922836 44922858 -205764996 + AT_rich Low_complexity Low_complexity 1 22 0 2219 64 3 7 chr2 44923204 44923511 -205764343 - AluSp SINE Alu 0 306 1 1948 232 48 2 chr2 44923651 44924125 -205763729 - MLT1F LTR MaLR -46 496 1 249 146 0 0 chr2 44924126 44924167 -205763687 - MSTA LTR MaLR 0 428 388 1187 120 0 0 chr2 44924167 44924325 -205763529 + AluSx SINE Alu 1 158 -154 307 293 73 20 chr2 44924809 44924825 -205763029 + L1ME3A LINE L1 6010 6024 -146 1826 159 3 46 chr2 44924825 44925151 -205762703 - AluSx SINE Alu 0 312 1 307 293 73 20 chr2 44925151 44925284 -205762570 + L1ME3A LINE L1 6024 6167 -3 5384 28 0 11 chr2 44925626 44926269 -205761585 + L1PA3 LINE L1 5517 6152 -3 34 24 0 0 chr2 44927301 44927342 -205760512 + AT_rich Low_complexity Low_complexity 1 41 0 1870 149 56 3 chr2 44927345 44927633 -205760221 + AluJb SINE Alu 1 303 -9 2078 72 4 4 chr2 44927896 44928161 -205759693 + AluSg SINE Alu 3 267 -43 265 315 0 34 chr2 44929932 44930021 -205757833 - L3 LINE CR1 -16 1561 1476 836 317 100 11 chr2 44930032 44930471 -205757383 - L2 LINE L2 0 3313 2836 549 305 199 54 chr2 44930572 44930643 -205757211 - L3 LINE CR1 -211 1366 1307 2515 53 0 0 chr2 44930643 44930945 -205756909 + AluY SINE Alu 1 302 -9 549 305 199 54 chr2 44930945 44931610 -205756244 - L3 LINE CR1 -270 1307 523 946 174 52 28 chr2 44931914 44932127 -205755727 + MER20 DNA MER1_type 1 218 -1 2044 131 0 13 chr2 44933231 44933536 -205754318 - AluJb SINE Alu -10 302 2 1779 92 118 7 chr2 44933909 44934180 -205753674 - AluSc SINE Alu -8 301 1 300 238 66 83 chr2 44934478 44934659 -205753195 - L1ME4a LINE L1 -107 6014 5837 2763 133 43 52 chr2 44934661 44934741 -205753113 - L1MB2 LINE L1 -6 6165 6086 1742 91 30 23 chr2 44934741 44935005 -205752849 - L1PB1 LINE L1 -2 6149 5884 2763 133 43 52 chr2 44935005 44935526 -205752328 - L1MB2 LINE L1 -85 6086 5569 237 313 16 0 chr2 44935651 44935715 -205752139 + L2 LINE L2 3208 3272 0 342 344 51 32 chr2 44935732 44935889 -205751965 + MIR3 SINE MIR 35 194 -14 255 217 0 17 chr2 44935918 44935978 -205751876 + L2 LINE L2 3222 3280 -33 181 265 0 0 chr2 44936662 44936696 -205751158 - L2 LINE L2 -102 3170 3137 337 365 39 19 chr2 44937161 44937317 -205750537 - L3b LINE CR1 -24 1559 1401 1928 125 3 52 chr2 44937502 44937807 -205750047 - AluSg SINE Alu -6 304 15 353 333 49 0 chr2 44937850 44937973 -205749881 - L2 LINE L2 -1 3271 3143 506 311 101 0 chr2 44938046 44938265 -205749589 - MIR SINE MIR -10 252 12 614 186 0 0 chr2 44938430 44938527 -205749327 - FLAM_A SINE Alu -44 98 2 22 0 0 0 chr2 44938795 44938817 -205749037 + AT_rich Low_complexity Low_complexity 1 22 0 23 68 0 0 chr2 44940165 44940209 -205747645 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 44940497 44940519 -205747335 + AT_rich Low_complexity Low_complexity 1 22 0 323 278 33 40 chr2 44941248 44941416 -205746438 + MIR SINE MIR 31 198 -64 2081 122 3 7 chr2 44941612 44941906 -205745948 - AluSx SINE Alu -19 293 1 270 306 92 0 chr2 44942006 44942104 -205745750 + L1MEd LINE L1 499 605 -5514 237 33 0 0 chr2 44942232 44942262 -205745592 + (TTG)n Simple_repeat Simple_repeat 1 30 0 5728 150 10 7 chr2 44942296 44943085 -205744769 - L1PB1 LINE L1 -1 6150 5365 231 36 0 0 chr2 44943085 44943113 -205744741 + (TTC)n Simple_repeat Simple_repeat 2 29 0 2270 85 3 3 chr2 44943115 44943397 -205744457 - AluSp SINE Alu -31 282 1 5728 150 10 7 chr2 44943397 44944191 -205743663 - L1PB1 LINE L1 -786 5365 4558 393 285 8 24 chr2 44944192 44944315 -205743539 + L2 LINE L2 1729 1849 -1465 * 1612 263 129 12 chr2 44944292 44944572 -205743282 + L2 LINE L2 2368 2614 -699 1943 140 3 16 chr2 44944572 44944879 -205742975 - AluSx SINE Alu -9 303 1 1612 263 129 12 chr2 44944879 44945273 -205742581 + L2 LINE L2 2614 3130 -183 2584 155 9 12 chr2 44945275 44945700 -205742154 + MER57B LTR ERV1 1 424 -10 301 105 70 0 chr2 44945868 44945925 -205741929 + L1MB3 LINE L1 6123 6183 0 255 351 21 0 chr2 44946262 44946356 -205741498 + MIR SINE MIR 44 139 -69 510 326 71 5 chr2 44946483 44946667 -205741187 - MER91A DNA MER1_type 0 196 1 2245 96 3 0 chr2 44946829 44947121 -205740733 + AluSc SINE Alu 1 293 -16 343 287 211 29 chr2 44947403 44947612 -205740242 + L2 LINE L2 2532 2778 -536 485 253 103 23 chr2 44948139 44948313 -205739541 + MIR SINE MIR 75 262 0 25 83 0 0 chr2 44948969 44949029 -205738825 + AT_rich Low_complexity Low_complexity 1 60 0 261 262 99 14 chr2 44949087 44949228 -205738626 + L1ME4a LINE L1 5967 6119 -2 1763 154 98 11 chr2 44950195 44950552 -205737302 + L1M3 LINE L1 5395 5782 -398 816 73 0 0 chr2 44950551 44950660 -205737194 + L1P4 LINE L1 5392 5500 -668 * 2250 105 0 13 chr2 44950775 44951081 -205736773 - AluSx SINE Alu -10 302 1 764 283 71 52 chr2 44951087 44951404 -205736450 - L1MEc LINE L1 -1376 4839 4529 2312 111 0 6 chr2 44951404 44951719 -205736135 - AluSq SINE Alu 0 313 1 764 283 71 52 chr2 44951719 44952089 -205735765 - L1MEc LINE L1 -1686 4529 4139 316 256 152 0 chr2 44952128 44952253 -205735601 - L1MEc LINE L1 -2205 4010 3867 935 228 56 16 chr2 44952325 44952575 -205735279 - L1ME3A LINE L1 -7 6163 5904 464 216 0 0 chr2 44952580 44952668 -205735186 - FRAM SINE Alu -17 159 72 475 284 134 24 chr2 44952730 44953066 -205734788 - L1MEc LINE L1 -2921 3294 2996 1988 135 0 0 chr2 44953066 44953370 -205734484 + AluSq SINE Alu 1 304 0 475 284 134 24 chr2 44953370 44953742 -205734112 - L1MEc LINE L1 -3219 2996 2507 1191 224 7 7 chr2 44954067 44954353 -205733501 - L1MEc LINE L1 -4260 2136 1851 1393 170 50 23 chr2 44954359 44954659 -205733195 - L1MB4 LINE L1 -32 6148 5841 1109 129 29 52 chr2 44954714 44954830 -205733024 - L1PA8 LINE L1 0 6172 6062 2149 130 0 7 chr2 44954830 44955138 -205732716 - AluSg SINE Alu -4 306 1 1109 129 29 52 chr2 44955138 44955231 -205732623 - L1PA8 LINE L1 -110 6062 5968 2109 217 141 13 chr2 44955357 44955980 -205731874 + L2 LINE L2 2013 2715 -599 2039 161 62 5 chr2 44955980 44956262 -205731592 + L1MB4 LINE L1 5570 5883 -297 1468 198 31 7 chr2 44956262 44956550 -205731304 + AluJb SINE Alu 18 312 0 2039 161 62 5 chr2 44956550 44956671 -205731183 + L1MB4 LINE L1 5883 5996 -184 21 0 0 0 chr2 44956673 44956694 -205731160 + AT_rich Low_complexity Low_complexity 1 21 0 407 333 104 42 chr2 44956700 44956988 -205730866 - L2 LINE L2 -962 2352 2047 1799 242 153 63 chr2 44957011 44957713 -205730141 + HAL1 LINE L1 30 667 -1840 1727 159 7 30 chr2 44957713 44958015 -205729839 + AluJb SINE Alu 1 295 -17 435 19 0 0 chr2 44958017 44958069 -205729785 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1799 242 153 63 chr2 44958069 44958314 -205729540 + HAL1 LINE L1 667 1066 -1441 49 80 0 0 chr2 44958331 44958443 -205729411 + AT_rich Low_complexity Low_complexity 1 112 0 1657 193 3 3 chr2 44958467 44958757 -205729097 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr2 44958988 44959010 -205728844 + AT_rich Low_complexity Low_complexity 1 22 0 887 263 87 82 chr2 44959657 44960360 -205727494 + L2 LINE L2 2632 3313 0 308 256 74 45 chr2 44960587 44960763 -205727091 + L1ME LINE L1 4819 4999 -1147 483 279 159 24 chr2 44961069 44961359 -205726495 + L1MC/D LINE L1 5376 5704 -2104 552 174 69 56 chr2 44961547 44961691 -205726163 + LTR40a LTR ERVL 1 146 -373 422 277 102 31 chr2 44961710 44961925 -205725929 + L1ME LINE L1 5191 5389 -773 2449 50 7 3 chr2 44961925 44962224 -205725630 + AluY SINE Alu 1 300 -11 422 277 102 31 chr2 44962224 44962494 -205725360 + L1ME LINE L1 5389 5717 -445 1963 100 32 44 chr2 44962602 44962943 -205724911 - Tigger7 DNA MER2_type 0 2487 2151 528 207 45 0 chr2 44962928 44963039 -205724815 - Tigger7 DNA MER2_type -575 130 15 * 621 153 0 0 chr2 44963045 44963143 -205724711 + Tigger7 DNA MER2_type 32 129 -2358 775 89 0 0 chr2 44963186 44963298 -205724556 + Tigger7 DNA MER2_type 2254 2365 -126 * 2524 155 27 0 chr2 44963295 44963708 -205724146 + MER44D DNA MER2_type 127 605 0 513 282 75 25 chr2 44964052 44964293 -205723561 - L1MC4a LINE L1 -1849 5959 5707 210 252 122 61 chr2 44965793 44965908 -205721946 - L2 LINE L2 -12 3301 3180 2087 115 0 20 chr2 44966061 44966366 -205721488 + AluSx SINE Alu 3 301 -11 505 342 12 112 chr2 44966720 44967138 -205720716 + L2 LINE L2 2896 3271 -1 189 0 0 0 chr2 44967522 44967543 -205720311 + (A)n Simple_repeat Simple_repeat 1 21 0 2249 104 0 22 chr2 44967546 44967864 -205719990 + AluSx SINE Alu 1 311 -1 2248 85 3 0 chr2 44969347 44969663 -205718191 - AluSp SINE Alu 0 317 1 242 365 71 0 chr2 44969716 44969842 -205718012 - MIR SINE MIR 0 262 128 538 298 0 7 chr2 44969846 44969987 -205717867 + MIR SINE MIR 3 142 -120 940 206 0 11 chr2 44970767 44970951 -205716903 + FRAM SINE Alu 1 174 -2 2023 132 0 3 chr2 44971029 44971318 -205716536 + AluJb SINE Alu 1 288 -24 551 79 106 1 chr2 44971318 44971993 -205715861 + (TA)n Simple_repeat Simple_repeat 1 745 0 353 282 39 0 chr2 44972256 44972412 -205715442 + L1MEc LINE L1 1567 1728 -4668 2295 251 71 17 chr2 44972432 44973069 -205714785 + L2 LINE L2 2307 2977 -337 315 298 48 0 chr2 44973188 44973272 -205714582 - MIR SINE MIR -151 111 24 435 296 17 17 chr2 44974513 44974628 -205713226 - MIR3 SINE MIR -30 178 64 219 258 21 65 chr2 44976139 44976232 -205711622 - L2 LINE L2 -2 3311 3223 369 142 208 50 chr2 44976532 44976652 -205711202 + MER103 DNA DNA 25 163 -3 240 111 0 0 chr2 44976655 44976691 -205711163 + (TC)n Simple_repeat Simple_repeat 1 36 0 919 274 77 77 chr2 44977379 44977988 -205709866 - MLT1L LTR MaLR -5 610 2 2025 125 3 22 chr2 44978488 44978800 -205709054 - AluJb SINE Alu -6 306 1 22 0 0 0 chr2 44978820 44978842 -205709012 + AT_rich Low_complexity Low_complexity 1 22 0 6306 126 71 19 chr2 44979833 44980026 -205707828 + Tigger3b DNA MER2_type 1 182 -2846 2279 86 7 0 chr2 44980026 44980316 -205707538 + AluSx SINE Alu 1 292 -20 6306 126 71 19 chr2 44980316 44981292 -205706562 + Tigger3b DNA MER2_type 182 1231 0 1855 172 0 17 chr2 44982389 44982691 -205705163 - AluJb SINE Alu -15 297 1 496 273 103 38 chr2 44983270 44983695 -205704159 - L1ME4a LINE L1 -102 6019 5567 1798 166 20 0 chr2 44983701 44984003 -205703851 - AluJb SINE Alu -4 308 1 227 360 64 25 chr2 44984151 44984387 -205703467 - L1ME LINE L1 -350 5771 5527 283 330 64 37 chr2 44984666 44984854 -205703000 + L2 LINE L2 2864 3056 -216 437 185 34 92 chr2 44985003 44985122 -205702732 + MIR SINE MIR 86 197 -65 25 0 0 0 chr2 44987026 44987051 -205700803 + AT_rich Low_complexity Low_complexity 1 25 0 558 283 46 0 chr2 44987608 44987781 -205700073 - MIR3 SINE MIR -5 203 23 1462 181 100 0 chr2 44988470 44988740 -205699114 - AluJb SINE Alu -13 299 3 465 268 21 21 chr2 44989484 44989626 -205698228 - MIR SINE MIR 0 262 121 29 0 0 0 chr2 44989687 44989716 -205698138 + AT_rich Low_complexity Low_complexity 1 29 0 6024 127 41 46 chr2 44990035 44990325 -205697529 + L1MA5A LINE L1 4708 4998 -1299 2015 103 59 0 chr2 44990325 44990615 -205697239 + AluSc SINE Alu 1 307 -2 6024 127 41 46 chr2 44990615 44990721 -205697133 + L1MA5A LINE L1 4998 5103 -1194 1966 113 23 23 chr2 44990721 44991031 -205696823 - AluSx SINE Alu 0 312 3 6024 127 41 46 chr2 44991031 44992238 -205695616 + L1MA5A LINE L1 5103 6295 -2 2514 196 56 2 chr2 44992292 44992516 -205695338 - L1P LINE L1 -1723 4423 4213 7232 52 16 0 chr2 44992516 44993652 -205694202 - L1PA8 LINE L1 -8 6164 5023 2514 196 56 2 chr2 44993652 44993993 -205693861 - L1P LINE L1 -1933 4213 3823 2106 118 3 7 chr2 44993993 44994298 -205693556 - AluSx SINE Alu -8 304 1 313 301 29 0 chr2 44994318 44994421 -205693433 - L1 LINE L1 -1977 4169 4064 329 302 0 10 chr2 44994459 44994555 -205693299 - L1 LINE L1 -2101 4045 3951 181 250 15 44 chr2 44995018 44995086 -205692768 + L2 LINE L2 3182 3247 -25 27 0 0 0 chr2 44996264 44996291 -205691563 + AT_rich Low_complexity Low_complexity 1 27 0 360 234 72 9 chr2 44996454 44996565 -205691289 - MIR SINE MIR -30 232 115 668 197 0 16 chr2 44996916 44997043 -205690811 + FAM SINE Alu 1 125 -60 1089 176 0 78 chr2 44997045 44997250 -205690604 + AluJo SINE Alu 87 275 -37 877 137 42 0 chr2 44997459 44997627 -205690227 + L1MB4 LINE L1 6006 6180 0 925 234 16 62 chr2 44997785 44997998 -205689856 + MIR SINE MIR 7 208 -54 2415 82 7 0 chr2 44997998 44998301 -205689553 + AluSq SINE Alu 1 305 -8 925 234 16 62 chr2 44998301 44998343 -205689511 + MIR SINE MIR 208 250 -12 1439 251 81 26 chr2 45000631 45001129 -205686725 - MLT1H1 LTR MaLR -63 506 1 251 418 49 9 chr2 45001164 45001492 -205686362 - L2 LINE L2 -843 2471 2131 1772 158 14 10 chr2 45003020 45003312 -205684542 - AluJb SINE Alu -19 293 1 22 56 0 0 chr2 45003379 45003415 -205684439 + AT_rich Low_complexity Low_complexity 1 36 0 437 127 0 0 chr2 45003451 45003530 -205684324 - AluS SINE Alu -6 305 227 22 0 0 0 chr2 45003837 45003859 -205683995 + AT_rich Low_complexity Low_complexity 1 22 0 2120 100 7 7 chr2 45004832 45005122 -205682732 - AluSx SINE Alu -22 290 1 428 174 12 37 chr2 45005147 45005308 -205682546 + CT-rich Low_complexity Low_complexity 2 158 0 655 150 0 53 chr2 45005308 45005495 -205682359 + (TCCC)n Simple_repeat Simple_repeat 3 179 0 279 0 0 0 chr2 45005651 45005682 -205682172 + (TG)n Simple_repeat Simple_repeat 2 32 0 1884 157 0 7 chr2 45005703 45005990 -205681864 - AluJb SINE Alu -27 285 1 237 273 0 18 chr2 45006662 45006717 -205681137 - L2 LINE L2 -6 3307 3254 250 364 13 0 chr2 45006995 45007072 -205680782 - MIR SINE MIR -84 124 47 237 283 109 22 chr2 45007364 45007502 -205680352 - L2 LINE L2 -922 2392 2243 397 239 0 23 chr2 45007508 45007596 -205680258 - MER81 DNA DNA -26 88 3 195 343 39 0 chr2 45007598 45007700 -205680154 - L2 LINE L2 -1062 2252 2147 399 229 99 72 chr2 45008182 45008456 -205679398 - L2 LINE L2 0 3313 2948 685 261 33 23 chr2 45009198 45009413 -205678441 - Charlie8 DNA MER1_type -2199 218 2 1854 148 105 6 chr2 45010052 45010384 -205677470 + MLT1A1 LTR MaLR 1 365 0 258 215 171 57 chr2 45010404 45010632 -205677222 - L1MC5 LINE L1 -733 7228 6975 3602 178 76 22 chr2 45010673 45011645 -205676209 - L1MB7 LINE L1 -19 6165 5148 1095 144 6 33 chr2 45011670 45011850 -205676004 - AluJo SINE Alu -16 296 122 4053 224 77 14 chr2 45011884 45013102 -205674752 - L1MB7 LINE L1 -1000 5146 3848 1261 166 209 11 chr2 45013102 45013385 -205674469 + MER44D DNA MER2_type 1 609 0 4053 224 77 14 chr2 45013385 45013407 -205674447 - L1MB7 LINE L1 -2298 3848 3829 278 87 0 22 chr2 45013835 45013881 -205673973 - MADE1 DNA Mariner 0 80 36 1630 181 34 46 chr2 45013947 45014296 -205673558 + MER7A DNA MER2_type 3 345 -1 2193 141 0 3 chr2 45014519 45014832 -205673022 + AluSx SINE Alu 1 312 0 335 318 65 7 chr2 45014843 45014997 -205672857 + L1ME3A LINE L1 5042 5204 -942 1101 267 82 15 chr2 45015082 45015654 -205672200 + L1ME3A LINE L1 5276 5897 -273 1184 158 30 21 chr2 45016122 45016356 -205671498 + MER46A DNA MER2_type 1 236 0 1698 143 23 36 chr2 45016815 45017122 -205670732 + AluSx SINE Alu 1 303 -9 825 127 0 28 chr2 45017663 45017805 -205670049 + AluSp/q SINE Alu 175 312 -1 383 234 0 92 chr2 45018077 45018218 -205669636 + MIR3 SINE MIR 75 202 -6 1955 137 38 25 chr2 45018606 45018971 -205668883 + L1MB8 LINE L1 5809 6178 0 515 294 8 0 chr2 45020226 45020352 -205667502 + MIR SINE MIR 29 155 -107 26 0 0 0 chr2 45021604 45021630 -205666224 + AT_rich Low_complexity Low_complexity 1 26 0 329 238 38 31 chr2 45022186 45022346 -205665508 + L1MC5 LINE L1 7495 7655 -306 1716 171 80 16 chr2 45022788 45023163 -205664691 + MER57A LTR ERV1 3 401 -2 1786 148 13 20 chr2 45023526 45023824 -205664030 - AluJb SINE Alu -15 297 2 554 290 65 58 chr2 45023829 45024243 -205663611 + LTR68 LTR ERV1 2 418 -322 2177 160 70 10 chr2 45024248 45024649 -205663205 - MSTB LTR MaLR -1 425 1 2261 107 0 10 chr2 45024990 45025300 -205662554 + AluSg SINE Alu 1 307 -3 571 257 81 53 chr2 45025343 45025666 -205662188 + MARNA DNA Mariner 203 534 -52 243 215 11 86 chr2 45025589 45025682 -205662172 - MARNA DNA Mariner -458 128 43 * 191 234 0 104 chr2 45026042 45026119 -205661735 - MIR SINE MIR -71 191 123 191 125 0 0 chr2 45026610 45026642 -205661212 - L2 LINE L2 0 3313 3282 518 241 64 16 chr2 45026648 45026835 -205661019 - LTR16A LTR ERVL -6 444 249 318 253 46 23 chr2 45026960 45027047 -205660807 - L2 LINE L2 -16 3256 3168 1592 205 18 0 chr2 45027219 45027502 -205660352 + AluJo SINE Alu 13 300 -12 624 165 0 0 chr2 45027509 45027618 -205660236 - FLAM_C SINE Alu -11 132 24 1973 167 3 3 chr2 45027632 45027944 -205659910 - AluJb SINE Alu 0 312 1 197 105 0 26 chr2 45028866 45028904 -205658950 + (TTTTC)n Simple_repeat Simple_repeat 2 38 0 2416 84 0 3 chr2 45028906 45029214 -205658640 - AluSc SINE Alu -2 307 1 804 171 44 6 chr2 45029418 45029576 -205658278 - MER20 DNA MER1_type -2 217 54 274 163 0 0 chr2 45029580 45029623 -205658231 - MER96B DNA MER1_type? -184 233 191 723 177 68 14 chr2 45029772 45029919 -205657935 - MER45A DNA AcHobo -23 155 1 457 191 45 0 chr2 45030093 45030182 -205657672 + AluJ/FLAM SINE Alu 1 93 -219 305 226 151 0 chr2 45030182 45030275 -205657579 + MER96B DNA MER1_type? 311 417 0 1050 171 33 0 chr2 45030313 45030494 -205657360 - MER5A DNA MER1_type -1 188 2 440 311 86 90 chr2 45030692 45030959 -205656895 + L2 LINE L2 2985 3250 -22 898 126 0 0 chr2 45031160 45031287 -205656567 + FLAM_C SINE Alu 1 127 -16 888 127 127 19 chr2 45031341 45031499 -205656355 + AluSc SINE Alu 118 292 -17 2386 84 0 0 chr2 45031601 45031900 -205655954 + AluY SINE Alu 1 299 -12 285 118 20 0 chr2 45031999 45032050 -205655804 + MADE1 DNA Mariner 1 52 -28 2050 140 20 0 chr2 45032277 45032570 -205655284 + AluSg SINE Alu 1 299 -11 1764 177 14 0 chr2 45032583 45032877 -205654977 - AluJb SINE Alu -12 300 3 323 316 100 42 chr2 45033330 45033640 -205654214 + LTR16A LTR ERVL 29 356 -94 211 93 70 47 chr2 45034011 45034054 -205653800 - L2 LINE L2 0 3313 3270 842 184 0 0 chr2 45034240 45034376 -205653478 + FRAM SINE Alu 4 139 -37 818 154 0 0 chr2 45034403 45034526 -205653328 + FLAM_C SINE Alu 1 123 -10 211 148 12 173 chr2 45034593 45034674 -205653180 - L2 LINE L2 -287 2985 2918 271 169 17 0 chr2 45034768 45034827 -205653027 - FLAM_A SINE Alu 0 133 74 1125 168 0 6 chr2 45036553 45036726 -205651128 - FRAM SINE Alu -8 168 1 728 237 212 19 chr2 45037122 45037600 -205650254 + MLT1H1 LTR MaLR 15 555 0 1101 254 61 33 chr2 45037700 45037861 -205649993 - MLT1D LTR MaLR -64 441 286 1834 99 201 10 chr2 45037861 45038175 -205649679 - THE1C LTR MaLR -1 374 1 1101 254 61 33 chr2 45038175 45038442 -205649412 - MLT1D LTR MaLR -219 286 1 816 228 115 16 chr2 45038469 45038850 -205649004 + MER65B LTR ERV1 1 514 -17 9563 144 52 111 chr2 45039002 45040456 -205647398 + L1M4c LINE L1 18 1461 -4921 1258 178 5 5 chr2 45040456 45040664 -205647190 + AluJb SINE Alu 87 294 -18 9563 144 52 111 chr2 45040664 45041715 -205646139 + L1M4c LINE L1 1461 2572 -3810 1629 157 17 7 chr2 45041715 45042015 -205645839 + L1MB3 LINE L1 5879 6181 -2 446 275 104 46 chr2 45042236 45042476 -205645378 + L2 LINE L2 3048 3301 -12 2282 114 0 0 chr2 45042708 45043014 -205644840 + AluSx SINE Alu 1 306 -6 413 281 26 26 chr2 45043248 45043362 -205644492 - MIR SINE MIR -64 144 31 1316 169 108 9 chr2 45044784 45045015 -205642839 - AluJo SINE Alu -20 292 39 1854 160 0 3 chr2 45045202 45045484 -205642370 + AluJb SINE Alu 1 281 -31 252 0 0 0 chr2 45045486 45045514 -205642340 + (CA)n Simple_repeat Simple_repeat 2 29 0 475 242 166 0 chr2 45045668 45045825 -205642029 - HAL1 LINE L1 -874 1633 1451 493 224 174 31 chr2 45045846 45046167 -205641687 - HAL1 LINE L1 -1105 1402 1036 273 29 0 0 chr2 45046402 45046436 -205641418 + (CA)n Simple_repeat Simple_repeat 1 34 0 196 277 157 12 chr2 45047333 45047416 -205640438 + MIR SINE MIR 20 114 -148 195 42 0 0 chr2 45047429 45047453 -205640401 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 266 253 96 0 chr2 45047468 45047551 -205640303 + MIR SINE MIR 111 201 -61 471 35 0 0 chr2 45048017 45048074 -205639780 + (CA)n Simple_repeat Simple_repeat 2 58 0 207 0 0 0 chr2 45048882 45048905 -205638949 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 511 241 22 59 chr2 45049220 45049420 -205638434 + MIR SINE MIR 27 216 -46 190 391 36 0 chr2 45049420 45049530 -205638324 + L2 LINE L2 2502 2615 -699 188 347 92 0 chr2 45049961 45050059 -205637795 + L2 LINE L2 2678 2784 -530 481 266 44 38 chr2 45050291 45050449 -205637405 - L2 LINE L2 -1 3312 3154 372 265 0 0 chr2 45050470 45050553 -205637301 + L2 LINE L2 3190 3272 0 252 0 0 0 chr2 45051123 45051151 -205636703 + (A)n Simple_repeat Simple_repeat 1 28 0 518 253 76 83 chr2 45056241 45056699 -205631155 + L2 LINE L2 2156 2610 -704 248 258 0 0 chr2 45056809 45056875 -205630979 - MER103 DNA DNA -52 114 49 464 274 102 78 chr2 45056883 45057215 -205630639 + L2 LINE L2 2933 3272 0 413 256 98 0 chr2 45057233 45057366 -205630488 - MIR SINE MIR -16 246 101 2666 30 0 0 chr2 45057475 45057780 -205630074 + AluY SINE Alu 1 305 -6 2233 88 0 50 chr2 45058981 45059298 -205628556 + AluSc SINE Alu 1 301 -8 463 270 117 70 chr2 45059412 45059797 -205628057 - MLT1J LTR MaLR -81 430 28 349 289 84 59 chr2 45060144 45060190 -205627664 - MIR SINE MIR -11 251 208 2215 102 0 0 chr2 45060190 45060473 -205627381 + AluSc SINE Alu 1 283 -26 349 289 84 59 chr2 45060473 45060665 -205627189 - MIR SINE MIR -54 208 7 21 57 0 19 chr2 45060857 45060873 -205626981 + AT_rich Low_complexity Low_complexity 1 16 -36 1645 174 33 27 chr2 45060873 45061172 -205626682 + AluJo SINE Alu 1 301 -11 21 57 0 19 chr2 45061172 45061208 -205626646 + AT_rich Low_complexity Low_complexity 16 52 0 337 247 0 41 chr2 45061252 45061349 -205626505 - L1ME4a LINE L1 -38 6083 5991 1653 183 0 14 chr2 45062372 45062667 -205625187 + AluJo SINE Alu 12 302 -10 21 36 0 0 chr2 45062734 45062762 -205625092 + AT_rich Low_complexity Low_complexity 1 28 0 214 326 74 42 chr2 45062858 45062953 -205624901 - MIR SINE MIR -75 133 36 367 145 40 13 chr2 45063104 45063180 -205624674 - L1MB8 LINE L1 -32 6146 6069 1892 115 18 7 chr2 45063484 45063785 -205624069 + AluSx SINE Alu 1 304 0 262 197 61 0 chr2 45063786 45063852 -205624002 - L1ME1 LINE L1 -86 6080 6011 1408 168 9 5 chr2 45063867 45064081 -205623773 - AluJo SINE Alu -25 287 73 205 288 30 0 chr2 45067099 45067165 -205620689 - L2 LINE L2 -654 2660 2593 1564 142 4 4 chr2 45067838 45068070 -205619784 + AluSg/x SINE Alu 71 302 -10 1577 201 0 0 chr2 45068072 45068346 -205619508 - AluJo SINE Alu -38 274 1 231 232 360 8 chr2 45069811 45069936 -205617918 + MIR SINE MIR 23 191 -71 269 83 0 0 chr2 45069962 45069998 -205617856 - U2 snRNA snRNA -152 36 1 1495 185 10 43 chr2 45070051 45070354 -205617500 + AluJb SINE Alu 9 301 -11 26 0 0 0 chr2 45070407 45070433 -205617421 + AT_rich Low_complexity Low_complexity 1 26 0 623 200 0 0 chr2 45070433 45070543 -205617311 - FLAM_C SINE Alu -17 126 17 21 0 0 0 chr2 45071073 45071094 -205616760 + AT_rich Low_complexity Low_complexity 1 21 0 621 264 22 27 chr2 45071106 45071292 -205616562 - MIR SINE MIR -62 146 11 225 313 60 37 chr2 45071510 45071644 -205616210 - L2 LINE L2 -19 3294 3158 2186 91 14 0 chr2 45071685 45071972 -205615882 - AluSq SINE Alu -22 291 1 21 0 0 0 chr2 45072476 45072497 -205615357 + AT_rich Low_complexity Low_complexity 1 21 0 2212 95 0 3 chr2 45073218 45073514 -205614340 - AluY SINE Alu -16 295 1 2190 99 24 3 chr2 45073870 45074164 -205613690 - AluSx SINE Alu -12 300 1 1032 239 99 35 chr2 45074223 45074645 -205613209 - L1MC4 LINE L1 -241 7801 7353 1337 211 131 18 chr2 45074648 45075083 -205612771 + MLT1D LTR MaLR 3 486 -19 337 277 146 23 chr2 45075676 45075806 -205612048 - L2 LINE L2 -4 3309 3164 3819 217 51 48 chr2 45075998 45076774 -205611080 + L1MB8 LINE L1 2875 3658 -2488 2140 120 7 3 chr2 45076774 45077074 -205610780 + AluSq SINE Alu 1 301 -12 3819 217 51 48 chr2 45077074 45077619 -205610235 + L1MB8 LINE L1 3658 4200 -1946 846 297 61 11 chr2 45077911 45078271 -205609583 - HAL1b LINE L1 -702 646 269 2155 135 0 0 chr2 45078281 45078585 -205609269 - AluSx SINE Alu -8 304 1 25 0 0 28 chr2 45080494 45080518 -205607336 + AT_rich Low_complexity Low_complexity 1 25 -10 3095 83 51 7 chr2 45080518 45080952 -205606902 - MLT2A2 LTR ERVL 0 453 1 25 0 0 28 chr2 45080952 45080963 -205606891 + AT_rich Low_complexity Low_complexity 25 35 0 28 0 0 0 chr2 45080987 45081015 -205606839 + AT_rich Low_complexity Low_complexity 1 28 0 198 261 29 29 chr2 45081615 45081684 -205606170 - MIR SINE MIR -120 88 20 209 57 29 0 chr2 45082198 45082233 -205605621 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1509 180 3 63 chr2 45082237 45082537 -205605317 - AluJb SINE Alu -30 282 1 641 216 0 8 chr2 45082543 45082677 -205605177 - FLAM_A SINE Alu 0 133 1 25 31 0 0 chr2 45082688 45082720 -205605134 + AT_rich Low_complexity Low_complexity 1 32 0 193 98 49 0 chr2 45083908 45083949 -205603905 + (TA)n Simple_repeat Simple_repeat 1 43 0 27 49 0 0 chr2 45084047 45084088 -205603766 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 45084098 45084119 -205603735 + AT_rich Low_complexity Low_complexity 1 21 0 915 270 98 39 chr2 45084165 45084272 -205603582 - L1ME LINE L1 -369 5795 5696 1296 149 63 0 chr2 45084272 45084493 -205603361 + MER46A DNA MER2_type 2 236 0 915 270 98 39 chr2 45084493 45084893 -205602961 - L1ME LINE L1 -468 5696 5258 3850 176 20 65 chr2 45084972 45085692 -205602162 + L1MB8 LINE L1 4915 5553 -625 1357 218 66 33 chr2 45085692 45086054 -205601800 - MLT1A2 LTR MaLR 0 374 1 3850 176 20 65 chr2 45086054 45086648 -205601206 + L1MB8 LINE L1 5553 6172 -6 21 0 0 0 chr2 45087711 45087732 -205600122 + AT_rich Low_complexity Low_complexity 1 21 0 1207 199 17 0 chr2 45087797 45088028 -205599826 + MER46A DNA MER2_type 2 236 0 526 191 130 0 chr2 45088355 45088470 -205599384 - AluJo SINE Alu -176 136 7 335 269 102 0 chr2 45089151 45089259 -205598595 - L2 LINE L2 0 3313 3195 33 66 0 0 chr2 45089481 45089542 -205598312 + AT_rich Low_complexity Low_complexity 1 61 0 42159 36 3 2 chr2 45090298 45095673 -205592181 + L1P LINE L1 1 5382 -764 417 20 0 0 chr2 45295824 45295874 -205391980 + (TG)n Simple_repeat Simple_repeat 2 51 0 1807 116 0 63 chr2 45297412 45297544 -205390310 + AluJb SINE Alu 3 142 -170 225 0 0 0 chr2 45297544 45297569 -205390285 + (TA)n Simple_repeat Simple_repeat 2 26 0 1807 116 0 63 chr2 45297569 45297737 -205390117 + AluJb SINE Alu 142 284 -28 303 28 0 0 chr2 45297737 45297773 -205390081 + (CAT)n Simple_repeat Simple_repeat 2 37 0 2359 84 0 0 chr2 45297824 45298122 -205389732 + AluSc SINE Alu 1 298 -11 7191 56 3 58 chr2 45298485 45299469 -205388385 + SVA Other Other 451 1380 -6 1005 168 44 40 chr2 45301329 45301603 -205386251 + MER33 DNA MER1_type 44 318 -6 2226 131 0 0 chr2 45301672 45301969 -205385885 - AluSx SINE Alu -15 297 1 337 342 179 5 chr2 45302835 45303031 -205384823 + MIR SINE MIR 20 249 -13 226 213 25 50 chr2 45303327 45303407 -205384447 + L1ME LINE L1 5743 5820 -301 * 604 223 15 56 chr2 45303403 45303600 -205384254 + L1MC5 LINE L1 7729 7917 -44 4855 229 88 17 chr2 45304230 45305385 -205382469 + L1ME1 LINE L1 3088 4397 -1749 2179 100 3 19 chr2 45305385 45305694 -205382160 + AluSq SINE Alu 1 304 -9 4855 229 88 17 chr2 45305694 45306194 -205381660 + L1ME1 LINE L1 4397 4860 -1286 478 322 58 43 chr2 45306268 45306783 -205381071 - HAL1b LINE L1 -711 637 115 829 132 0 8 chr2 45306840 45306961 -205380893 + AluSg/x SINE Alu 174 293 -17 871 126 25 25 chr2 45307197 45307356 -205380498 - L1MB7 LINE L1 -22 6162 6004 304 255 29 0 chr2 45307360 45307462 -205380392 - L1MB7 LINE L1 -2379 5429 5325 717 192 0 0 chr2 45307860 45307980 -205379874 - FLAM_A SINE Alu -13 120 1 242 329 18 18 chr2 45308012 45308176 -205379678 + L1ME LINE L1 5616 5779 -342 2035 155 3 0 chr2 45308340 45308649 -205379205 + AluSx SINE Alu 1 310 -2 3771 168 21 14 chr2 45308712 45309432 -205378422 - L1MB7 LINE L1 -19 6165 5441 264 250 87 19 chr2 45309433 45309537 -205378317 + L1ME1 LINE L1 4874 4984 -1162 453 260 39 7 chr2 45309556 45309710 -205378144 + L1ME1 LINE L1 5051 5209 -937 1476 202 34 18 chr2 45309786 45310167 -205377687 + L1ME1 LINE L1 5219 5604 -562 41345 29 21 1 chr2 45310171 45316197 -205371657 + L1PA2 LINE L1 1 6152 -3 2292 206 34 7 chr2 45316228 45316790 -205371064 + L1ME1 LINE L1 5590 6166 0 1990 112 38 3 chr2 45316810 45317097 -205370757 + AluSx SINE Alu 1 297 -15 1890 134 0 72 chr2 45317373 45317708 -205370146 + AluJb SINE Alu 2 312 0 2657 191 34 19 chr2 45317765 45318295 -205369559 + MLT1F LTR MaLR 5 542 0 460 277 227 16 chr2 45319073 45319329 -205368525 + MLT1H1 LTR MaLR 43 352 -203 254 175 0 0 chr2 45319330 45319370 -205368484 + AluSg/x SINE Alu 139 178 -122 236 158 0 0 chr2 45319372 45319410 -205368444 + Alu SINE Alu 21 58 -262 385 193 68 130 chr2 45319490 45319625 -205368229 + MLT1H1 LTR MaLR 369 511 -44 2321 110 0 3 chr2 45319625 45319934 -205367920 - AluSq SINE Alu -5 308 1 499 125 45 0 chr2 45319942 45320030 -205367824 - L1MA8 LINE L1 -2 6289 6198 385 193 68 130 chr2 45320030 45320077 -205367777 + MLT1H1 LTR MaLR 518 548 -7 2149 123 7 0 chr2 45320413 45320705 -205367149 + AluSx SINE Alu 1 294 -18 206 32 32 0 chr2 45321459 45321490 -205366364 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1320 128 12 97 chr2 45321504 45321618 -205366236 - AluJo SINE Alu -70 242 161 2175 114 0 19 chr2 45321618 45321925 -205365929 - AluSx SINE Alu -11 301 1 1320 128 12 97 chr2 45321925 45322067 -205365787 - AluJo SINE Alu -151 161 8 22 0 0 0 chr2 45322083 45322105 -205365749 + AT_rich Low_complexity Low_complexity 1 22 0 2263 75 0 7 chr2 45322174 45322482 -205365372 + AluSc SINE Alu 1 306 0 4590 241 95 21 chr2 45322524 45324245 -205363609 - HAL1 LINE L1 -132 2375 528 267 255 52 52 chr2 45324671 45324824 -205363030 + HAL1 LINE L1 813 965 -1542 260 276 58 0 chr2 45324868 45324955 -205362899 - MIR SINE MIR -82 180 89 1124 68 0 0 chr2 45325300 45325432 -205362422 + AluSg1 SINE Alu 1 132 -177 285 29 0 0 chr2 45325487 45325521 -205362333 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 2316 113 0 3 chr2 45325722 45326031 -205361823 + AluSg SINE Alu 1 308 -2 2113 119 61 0 chr2 45326234 45326527 -205361327 + AluSx SINE Alu 1 311 -1 2062 115 4 0 chr2 45327787 45328065 -205359789 + AluSx SINE Alu 1 279 -33 369 0 0 0 chr2 45328065 45328106 -205359748 + (CA)n Simple_repeat Simple_repeat 1 41 0 2175 109 0 0 chr2 45328180 45328490 -205359364 + AluSg SINE Alu 1 310 0 531 260 39 34 chr2 45328559 45328750 -205359104 + MIR SINE MIR 38 227 -35 947 241 17 9 chr2 45329229 45329461 -205358393 + MIR SINE MIR 5 238 -24 339 214 99 38 chr2 45329463 45329594 -205358260 + MIR SINE MIR 121 259 -3 180 179 0 0 chr2 45329834 45329873 -205357981 + A-rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 45329953 45329974 -205357880 + AT_rich Low_complexity Low_complexity 1 21 0 297 299 102 28 chr2 45330159 45330336 -205357518 - L2 LINE L2 -1265 2049 1860 1537 156 42 3 chr2 45330875 45331183 -205356671 - MER33 DNA MER1_type 0 324 5 436 333 0 0 chr2 45331189 45331312 -205356542 + L2 LINE L2 3191 3313 0 28 29 0 0 chr2 45331997 45332032 -205355822 + AT_rich Low_complexity Low_complexity 1 35 0 238 245 28 75 chr2 45332228 45332334 -205355520 + MIR SINE MIR 99 199 -63 6230 167 42 38 chr2 45333896 45335054 -205352800 + L1MB7 LINE L1 3841 4993 -1191 1597 90 36 5 chr2 45335054 45335277 -205352577 + MER30 DNA MER1_type 1 230 0 6230 167 42 38 chr2 45335277 45335573 -205352281 + L1MB7 LINE L1 4993 5286 -898 1754 156 3 40 chr2 45335573 45335894 -205351960 + AluJb SINE Alu 1 309 -3 6230 167 42 38 chr2 45335894 45336174 -205351680 + L1MB7 LINE L1 5286 5605 -579 1406 156 78 28 chr2 45336174 45336456 -205351398 + AluJo SINE Alu 1 296 -16 2763 136 15 32 chr2 45336581 45336711 -205351143 + L1MB7 LINE L1 5650 5781 -403 2284 124 0 0 chr2 45336711 45337017 -205350837 + AluSx SINE Alu 1 306 -6 2763 136 15 32 chr2 45337017 45337414 -205350440 + L1MB7 LINE L1 5781 6168 -16 4474 44 9 9 chr2 45338281 45338846 -205349008 - SVA Other Other -821 565 1 283 326 34 0 chr2 45339287 45339465 -205348389 + L1ME LINE L1 5678 5861 -260 2235 122 20 0 chr2 45339576 45339880 -205347974 - AluSx SINE Alu -2 310 1 615 184 72 8 chr2 45339929 45340054 -205347800 - AluJo SINE Alu -177 135 3 195 247 144 62 chr2 45340087 45340184 -205347670 + MIR3 SINE MIR 98 202 -6 1120 122 4 122 chr2 45340250 45340520 -205347334 + L1MA6 LINE L1 6063 6300 0 213 233 0 0 chr2 45341537 45341580 -205346274 + CT-rich Low_complexity Low_complexity 2 44 0 739 177 79 59 chr2 45342035 45342340 -205345514 - L1MC5 LINE L1 -44 7917 7607 1764 144 76 118 chr2 45342373 45342407 -205345447 - L1MB5 LINE L1 -7 6167 6133 2173 90 10 3 chr2 45342407 45342695 -205345159 - AluSg SINE Alu -20 290 1 1764 144 76 118 chr2 45342695 45343030 -205344824 - L1MB5 LINE L1 -41 6133 5826 207 0 0 0 chr2 45343030 45343053 -205344801 + (CA)n Simple_repeat Simple_repeat 2 24 0 1764 144 76 118 chr2 45343053 45343232 -205344622 - L1MB5 LINE L1 -348 5826 5641 2222 95 24 0 chr2 45343233 45343529 -205344325 - AluSp SINE Alu -10 303 1 951 198 99 61 chr2 45343543 45343938 -205343916 - L1MC5 LINE L1 -370 7591 7182 1392 172 38 41 chr2 45343949 45344292 -205343562 - L1MC1 LINE L1 0 6333 5992 195 129 0 0 chr2 45344297 45344328 -205343526 + (TTCCC)n Simple_repeat Simple_repeat 3 33 0 209 176 0 0 chr2 45344427 45344461 -205343393 + CT-rich Low_complexity Low_complexity 3 36 0 1700 170 0 56 chr2 45345513 45345836 -205342018 - AluJo SINE Alu -7 305 1 2199 123 0 0 chr2 45346193 45346587 -205341267 - AluSx SINE Alu 0 394 1 25 0 0 0 chr2 45347063 45347088 -205340766 + AT_rich Low_complexity Low_complexity 1 25 0 5173 117 16 8 chr2 45347088 45347874 -205339980 - L1PA16 LINE L1 -9 6157 5363 1748 186 0 19 chr2 45347874 45348191 -205339663 - AluJb SINE Alu -1 311 1 5173 117 16 8 chr2 45348191 45348233 -205339621 - L1PA16 LINE L1 -803 5363 5323 608 171 0 0 chr2 45348234 45348351 -205339503 + L1 LINE L1 5161 5277 -869 2845 198 13 48 chr2 45348694 45349314 -205338540 - MER77 LTR ERV1 -7 598 1 2134 180 60 10 chr2 45351238 45351740 -205336114 - LTR27 LTR ERV1 0 501 3 23 33 0 0 chr2 45351770 45351800 -205336054 + AT_rich Low_complexity Low_complexity 1 30 0 591 119 0 0 chr2 45351829 45351913 -205335941 - AluJ/FLAM SINE Alu -228 84 1 460 282 8 24 chr2 45351913 45352037 -205335817 + L2 LINE L2 3192 3313 0 1630 146 26 68 chr2 45353007 45353315 -205334539 - AluSg SINE Alu -15 295 1 2334 73 3 0 chr2 45353550 45353839 -205334015 + AluY SINE Alu 17 306 -5 27 73 0 0 chr2 45355143 45355198 -205332656 + AT_rich Low_complexity Low_complexity 1 55 0 1816 137 13 61 chr2 45356281 45356594 -205331260 + AluJo SINE Alu 1 298 -14 31 88 0 0 chr2 45357790 45357870 -205329984 + AT_rich Low_complexity Low_complexity 1 80 0 2036 160 0 3 chr2 45358326 45358639 -205329215 - AluJb SINE Alu 0 312 1 1046 133 7 0 chr2 45359487 45359638 -205328216 - FRAM SINE Alu -30 146 1 1992 94 12 0 chr2 45360750 45361006 -205326848 - AluSx SINE Alu -19 293 35 2115 132 0 13 chr2 45361857 45362161 -205325693 - AluSq SINE Alu -13 300 1 198 0 0 0 chr2 45362617 45362639 -205325215 + (T)n Simple_repeat Simple_repeat 1 22 0 225 0 0 0 chr2 45364006 45364031 -205323823 + (T)n Simple_repeat Simple_repeat 1 25 0 1641 150 3 75 chr2 45364159 45364469 -205323385 + L1MB2 LINE L1 5836 6118 -53 2387 91 0 7 chr2 45364469 45364776 -205323078 + AluY SINE Alu 1 305 -6 1641 150 3 75 chr2 45364776 45364826 -205323028 + L1MB2 LINE L1 6118 6170 -1 1909 175 0 6 chr2 45365333 45365647 -205322207 - AluJo SINE Alu 0 312 1 1675 169 51 0 chr2 45365720 45365993 -205321861 - AluSx SINE Alu -21 291 5 205 368 35 35 chr2 45366108 45366222 -205321632 - L2 LINE L2 -40 3232 3119 2497 66 0 3 chr2 45367005 45367306 -205320548 + AluSg SINE Alu 1 300 -10 1064 262 222 15 chr2 45368171 45368802 -205319052 + L2 LINE L2 2513 3275 -38 364 238 166 20 chr2 45368814 45368965 -205318889 + MIR3 SINE MIR 33 205 -3 2074 68 0 0 chr2 45369683 45369931 -205317923 + AluSc SINE Alu 39 286 -23 216 0 0 0 chr2 45370674 45370698 -205317156 + (T)n Simple_repeat Simple_repeat 1 24 0 2399 69 0 10 chr2 45371699 45372004 -205315850 + AluY SINE Alu 1 302 -9 361 309 32 77 chr2 45372577 45372917 -205314937 + L1ME4a LINE L1 5067 5391 -755 292 258 32 0 chr2 45373219 45373312 -205314542 + L1ME4a LINE L1 5615 5710 -411 521 187 90 0 chr2 45373325 45373459 -205314395 - L1ME2 LINE L1 -1 6163 6018 306 288 85 0 chr2 45373461 45373638 -205314216 + L1ME4a LINE L1 5703 5894 -227 309 165 289 8 chr2 45373664 45373785 -205314069 + L1ME4a LINE L1 5949 6103 -18 244 325 48 64 chr2 45374775 45375086 -205312768 - L2 LINE L2 0 3272 2926 2057 131 13 0 chr2 45375093 45375391 -205312463 + AluSq SINE Alu 9 310 -3 366 314 176 33 chr2 45375445 45375984 -205311870 - L2 LINE L2 -492 2822 2207 244 341 168 6 chr2 45376509 45376676 -205311178 - L2 LINE L2 -1975 1339 1146 441 220 28 50 chr2 45376882 45377023 -205310831 - L1MC5 LINE L1 -61 7900 7763 2017 146 0 0 chr2 45377224 45377538 -205310316 + AluSx SINE Alu 1 314 0 1111 202 15 19 chr2 45377742 45378004 -205309850 + MIR SINE MIR 1 261 -1 2316 88 0 3 chr2 45378346 45378641 -205309213 + AluSc SINE Alu 1 294 -15 301 237 79 0 chr2 45379232 45379308 -205308546 + L2 LINE L2 3136 3217 -55 2118 109 10 0 chr2 45379532 45379826 -205308028 - AluSx SINE Alu -15 297 1 256 170 0 0 chr2 45379936 45379989 -205307865 - L1PB4 LINE L1 0 6156 6104 525 247 31 12 chr2 45380087 45380249 -205307605 - L1PB4 LINE L1 -1 6155 5991 199 250 89 18 chr2 45380263 45380319 -205307535 + L2 LINE L2 3206 3265 -7 1303 139 27 0 chr2 45380373 45380596 -205307258 - L1PA16 LINE L1 0 6166 5938 1907 167 0 10 chr2 45381690 45381995 -205305859 + AluJo SINE Alu 1 302 -10 1508 132 0 18 chr2 45382142 45382361 -205305493 + AluJo SINE Alu 85 299 -13 297 284 43 26 chr2 45382594 45382710 -205305144 - MLT2E LTR ERVL -479 149 32 26 30 0 0 chr2 45382876 45382909 -205304945 + AT_rich Low_complexity Low_complexity 1 33 0 2564 171 34 28 chr2 45383305 45383842 -205304012 - MER34 LTR ERV1 -2 540 1 1617 231 170 19 chr2 45383842 45384408 -205303446 - L2 LINE L2 -538 2776 2126 4762 123 33 16 chr2 45384962 45385726 -205302128 - LTR19C LTR ERV1 0 779 3 1772 136 16 60 chr2 45385925 45386242 -205301612 + AluJo SINE Alu 9 311 -1 2385 85 3 3 chr2 45387220 45387525 -205300329 + AluSc SINE Alu 1 305 -4 445 265 205 10 chr2 45387719 45387919 -205299935 - MIR SINE MIR -15 247 9 389 315 30 60 chr2 45388083 45388283 -205299571 + L1ME4a LINE L1 5468 5661 -501 2321 95 3 0 chr2 45388285 45388579 -205299275 + AluSx SINE Alu 1 295 -17 2408 94 0 0 chr2 45388680 45388979 -205298875 - AluSx SINE Alu -13 299 1 22 0 0 0 chr2 45388989 45389011 -205298843 + AT_rich Low_complexity Low_complexity 1 22 0 402 276 41 24 chr2 45389070 45389240 -205298614 + L1ME4a LINE L1 5703 5875 -246 23 33 0 0 chr2 45389422 45389452 -205298402 + AT_rich Low_complexity Low_complexity 1 30 0 1361 131 23 0 chr2 45390272 45390486 -205297368 - MER30 DNA MER1_type 0 230 12 2088 138 0 0 chr2 45390518 45390816 -205297038 - AluSx SINE Alu -14 298 1 1424 98 75 0 chr2 45391171 45391385 -205296469 + L1PB1 LINE L1 5915 6144 -7 226 367 90 39 chr2 45392028 45392199 -205295655 + L2 LINE L2 449 610 -2704 2212 109 3 0 chr2 45392199 45392493 -205295361 + AluSq SINE Alu 1 295 -18 226 367 90 39 chr2 45392493 45392863 -205294991 + L2 LINE L2 610 1018 -2296 229 216 0 20 chr2 45393114 45393165 -205294689 + L2 LINE L2 1375 1424 -1890 2283 99 0 10 chr2 45393198 45393501 -205294353 + AluSc SINE Alu 1 300 -9 547 211 111 47 chr2 45393695 45393974 -205293880 + L1MC5 LINE L1 7631 7927 -34 441 266 27 21 chr2 45394210 45394398 -205293456 - L1MC5 LINE L1 -32 7929 7741 5835 140 9 6 chr2 45394478 45394998 -205292856 + L1MA4 LINE L1 5259 5779 -521 1951 108 3 86 chr2 45394998 45395323 -205292531 + AluSx SINE Alu 1 298 -14 5835 140 9 6 chr2 45395323 45395838 -205292016 + L1MA4 LINE L1 5779 6291 -9 249 301 180 0 chr2 45395867 45396123 -205291731 + L1 LINE L1 3791 4092 -2054 32 75 0 0 chr2 45396128 45396195 -205291659 + AT_rich Low_complexity Low_complexity 1 67 0 340 345 24 18 chr2 45396241 45396409 -205291445 + L1 LINE L1 4205 4373 -1773 2588 245 67 25 chr2 45396454 45396673 -205291181 + L1MEc LINE L1 124 332 -6064 1818 126 50 0 chr2 45396673 45396951 -205290903 + AluSx SINE Alu 4 295 -17 2588 245 67 25 chr2 45396951 45397515 -205290339 + L1MEc LINE L1 332 954 -5442 1479 244 120 38 chr2 45397515 45398016 -205289838 - MLT1F LTR MaLR 0 542 1 2588 245 67 25 chr2 45398016 45398155 -205289699 + L1MEc LINE L1 954 1086 -5310 876 230 0 0 chr2 45398153 45398362 -205289492 - L1M4 LINE L1 -3662 2484 2276 * 290 200 13 13 chr2 45398680 45398755 -205289099 - L1ME4a LINE L1 0 6121 6047 2166 93 4 0 chr2 45399025 45399304 -205288550 - AluSq SINE Alu -29 284 5 324 341 121 12 chr2 45399361 45399534 -205288320 - L1MC/D LINE L1 -722 5520 5329 356 208 13 0 chr2 45399599 45399676 -205288178 - MER69 DNA AcHobo 0 2526 2449 * 423 171 120 8 chr2 45399671 45399788 -205288066 - MER69 DNA AcHobo -2379 147 18 282 239 76 11 chr2 45400074 45400166 -205287688 + L2 LINE L2 3134 3231 -82 325 211 122 16 chr2 45400524 45400647 -205287207 - L1ME4a LINE L1 -35 6086 5951 2149 131 0 19 chr2 45402105 45402419 -205285435 - AluSx SINE Alu -4 308 1 336 307 39 117 chr2 45404416 45404673 -205283181 - L2 LINE L2 -1 3271 3035 2186 118 7 0 chr2 45404705 45405036 -205282818 + AluJb SINE Alu 3 335 0 2196 117 0 19 chr2 45405149 45405456 -205282398 + AluSx SINE Alu 1 301 -11 483 214 145 8 chr2 45405456 45405577 -205282277 - MIR3 SINE MIR -11 197 55 1899 138 0 45 chr2 45406339 45406650 -205281204 + AluSx SINE Alu 1 297 -15 204 40 0 0 chr2 45406651 45406676 -205281178 + (CA)n Simple_repeat Simple_repeat 2 26 0 2184 62 0 0 chr2 45406842 45407099 -205280755 + AluY SINE Alu 37 293 -18 408 71 0 0 chr2 45407196 45407252 -205280602 + (TC)n Simple_repeat Simple_repeat 1 56 0 296 364 69 85 chr2 45407256 45407646 -205280208 - L2 LINE L2 -20 3252 2869 782 238 22 0 chr2 45408581 45408766 -205279088 + MER5A DNA MER1_type 1 189 0 2368 100 0 0 chr2 45408875 45409174 -205278680 - AluSq SINE Alu -14 299 1 561 121 11 0 chr2 45409350 45409441 -205278413 - MER4E LTR ERV1 -252 527 436 * 1301 130 10 0 chr2 45409437 45409645 -205278209 + MER4E LTR ERV1 531 740 -26 2162 86 7 33 chr2 45410308 45410611 -205277243 + AluSx SINE Alu 1 295 -17 618 235 62 6 chr2 45410676 45410838 -205277016 - MIR SINE MIR -2 260 90 180 241 56 37 chr2 45410845 45410899 -205276955 - L3b LINE CR1 -140 1443 1389 230 369 78 0 chr2 45410924 45411027 -205276827 - L2 LINE L2 -29 3243 3133 950 245 36 0 chr2 45411063 45411312 -205276542 + MIR SINE MIR 3 260 -2 561 195 13 13 chr2 45413359 45413508 -205274346 - L1MEc LINE L1 -4000 2396 2248 369 0 0 0 chr2 45414283 45414324 -205273530 + (CA)n Simple_repeat Simple_repeat 2 42 0 629 295 79 32 chr2 45414388 45414757 -205273097 - MLT1J LTR MaLR -125 386 1 2421 89 3 0 chr2 45414985 45415288 -205272566 - AluSq SINE Alu -9 304 1 234 385 65 26 chr2 45415288 45415639 -205272215 + L2 LINE L2 2334 2698 -616 864 268 107 42 chr2 45415639 45416042 -205271812 - MLT1G1 LTR MaLR -2 593 165 1165 91 19 0 chr2 45416419 45416573 -205271281 - AluSg/x SINE Alu -20 292 136 1783 110 92 18 chr2 45416777 45417049 -205270805 + AluSx SINE Alu 1 292 -20 2502 68 3 0 chr2 45417525 45417833 -205270021 - AluY SINE Alu -2 309 1 2187 108 0 0 chr2 45418371 45418668 -205269186 - AluSx SINE Alu -15 297 1 224 118 0 39 chr2 45418962 45419013 -205268841 + (TTTTTG)n Simple_repeat Simple_repeat 2 50 0 223 299 75 0 chr2 45419447 45419514 -205268340 - L2 LINE L2 0 3272 3201 535 206 24 40 chr2 45419928 45420054 -205267800 + MIR3 SINE MIR 74 197 -11 24 0 0 0 chr2 45420314 45420338 -205267516 + AT_rich Low_complexity Low_complexity 1 24 0 2414 116 39 41 chr2 45420437 45420475 -205267379 - L1MB3 LINE L1 -10 6173 6136 2437 99 0 0 chr2 45420475 45420778 -205267076 - AluSx SINE Alu -9 303 1 2414 116 39 41 chr2 45420778 45421177 -205266677 - L1MB3 LINE L1 -47 6136 5737 1994 153 0 0 chr2 45421526 45421826 -205266028 - AluSx SINE Alu -12 300 1 384 353 27 13 chr2 45422125 45422275 -205265579 - MIR SINE MIR -109 153 2 207 0 0 0 chr2 45423511 45423534 -205264320 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 1474 147 121 23 chr2 45423544 45423809 -205264045 - AluJb SINE Alu -21 291 1 244 204 86 11 chr2 45424020 45424113 -205263741 + L1ME4a LINE L1 5975 6074 -47 296 331 51 19 chr2 45424644 45424801 -205263053 + MIR SINE MIR 92 253 -9 186 43 0 0 chr2 45426008 45426031 -205261823 + (TTTTC)n Simple_repeat Simple_repeat 4 26 0 220 375 0 0 chr2 45426053 45426125 -205261729 - L3b LINE CR1 -131 1452 1381 866 122 0 0 chr2 45426594 45426709 -205261145 - FLAM_C SINE Alu -28 115 1 1980 141 10 3 chr2 45426716 45427013 -205260841 - AluJo SINE Alu -13 299 1 2263 115 0 0 chr2 45428951 45429256 -205258598 + AluSg1 SINE Alu 1 305 -4 2124 71 60 0 chr2 45429774 45430056 -205257798 - AluY SINE Alu -12 299 1 1288 101 0 0 chr2 45430058 45430226 -205257628 - AluSq SINE Alu -12 301 134 2222 77 7 7 chr2 45430226 45430525 -205257329 - AluY SINE Alu -12 299 1 270 254 14 0 chr2 45431185 45431256 -205256598 - MLT1K LTR MaLR 0 588 517 312 252 8 49 chr2 45431558 45431681 -205256173 + L1ME LINE L1 5733 5850 -271 328 248 30 30 chr2 45432361 45432462 -205255392 - 7SK RNA RNA -89 104 4 185 276 17 52 chr2 45432535 45432593 -205255261 + MIR SINE MIR 207 262 0 270 286 203 66 chr2 45432991 45433218 -205254636 - MIR SINE MIR 0 262 5 21 0 0 0 chr2 45433930 45433951 -205253903 + AT_rich Low_complexity Low_complexity 1 21 0 190 309 96 11 chr2 45435195 45435289 -205252565 - MIR SINE MIR -38 224 123 265 196 0 0 chr2 45435305 45435361 -205252493 + L2 LINE L2 3257 3312 -1 * 278 310 24 3 chr2 45435356 45435462 -205252392 - MIR SINE MIR -130 132 26 1098 136 49 162 chr2 45435590 45435791 -205252063 - AluJo SINE Alu 0 312 90 2125 125 0 52 chr2 45435791 45436120 -205251734 - AluSx SINE Alu 0 312 1 1098 136 49 162 chr2 45436120 45436151 -205251703 - AluJo SINE Alu -222 90 57 1156 60 0 0 chr2 45436151 45436301 -205251553 - L1PA6 LINE L1 0 6154 6005 1098 136 49 162 chr2 45436301 45436312 -205251542 - AluJo SINE Alu -255 57 106 249 33 0 0 chr2 45436312 45436342 -205251512 + (TAG)n Simple_repeat Simple_repeat 1 30 0 1098 136 49 162 chr2 45436342 45436404 -205251450 - AluJo SINE Alu -205 107 40 24 53 0 0 chr2 45437188 45437226 -205250628 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr2 45438126 45438156 -205249698 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 45438228 45438249 -205249605 + AT_rich Low_complexity Low_complexity 1 21 0 1729 155 39 7 chr2 45438285 45438569 -205249285 - AluJb SINE Alu -19 293 1 213 39 0 0 chr2 45438900 45438926 -205248928 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1798 166 0 32 chr2 45439090 45439398 -205248456 + AluJb SINE Alu 2 299 -13 1312 300 135 47 chr2 45439542 45440975 -205246879 - L2 LINE L2 -1 3271 87 1894 143 7 7 chr2 45441200 45441500 -205246354 + AluSx SINE Alu 1 300 -12 196 260 60 0 chr2 45441550 45441600 -205246254 + MIR3 SINE MIR 142 194 -14 2240 109 0 0 chr2 45441712 45442016 -205245838 - AluY SINE Alu -6 305 2 252 111 0 0 chr2 45442107 45442152 -205245702 + (TG)n Simple_repeat Simple_repeat 2 46 0 402 264 66 12 chr2 45442206 45442373 -205245481 - L1ME4a LINE L1 -255 5866 5691 25 75 0 0 chr2 45442660 45442713 -205245141 + AT_rich Low_complexity Low_complexity 1 53 0 2041 145 0 0 chr2 45442815 45443122 -205244732 + AluSx SINE Alu 1 307 0 2307 80 20 0 chr2 45444548 45444849 -205243005 - AluSp SINE Alu -6 307 1 2038 160 0 3 chr2 45445131 45445443 -205242411 + AluJb SINE Alu 1 311 -1 1996 135 24 42 chr2 45445453 45445571 -205242283 + L1MB2 LINE L1 5798 5917 -254 1827 115 0 0 chr2 45445571 45445814 -205242040 + AluSq SINE Alu 5 247 -66 184 30 61 0 chr2 45445814 45445847 -205242007 + A-rich Low_complexity Low_complexity 3 37 0 1996 135 24 42 chr2 45445847 45446106 -205241748 + L1MB2 LINE L1 5915 6169 -2 1770 161 61 0 chr2 45446317 45446597 -205241257 - AluJb SINE Alu -15 297 1 2095 64 0 89 chr2 45446655 45446969 -205240885 + AluY SINE Alu 24 309 -2 1587 179 15 62 chr2 45448726 45449050 -205238804 - AluJo SINE Alu -3 309 1 258 209 164 15 chr2 45450694 45450828 -205237026 - L1ME4a LINE L1 0 6121 5968 1740 158 0 30 chr2 45451048 45451345 -205236509 + AluJo SINE Alu 1 288 -24 21 57 0 0 chr2 45452111 45452146 -205235708 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 45452447 45452476 -205235378 + AT_rich Low_complexity Low_complexity 1 29 0 3563 174 83 21 chr2 45452622 45453307 -205234547 - L1MB3 LINE L1 -3 6180 5539 2204 114 13 0 chr2 45453307 45453605 -205234249 + AluSx SINE Alu 1 302 -10 3563 174 83 21 chr2 45453605 45453716 -205234138 - L1MB3 LINE L1 -644 5539 5436 823 136 0 57 chr2 45453716 45453856 -205233998 - FLAM_C SINE Alu -1 132 1 3563 174 83 21 chr2 45453856 45453901 -205233953 - L1MB3 LINE L1 -747 5436 5286 313 308 208 0 chr2 45454025 45454145 -205233709 + MIR SINE MIR 49 193 -69 2236 102 0 0 chr2 45455339 45455632 -205232222 + AluSc SINE Alu 1 293 -16 955 190 0 6 chr2 45456302 45456465 -205231389 + FRAM SINE Alu 1 162 -4 1103 231 12 4 chr2 45457313 45457556 -205230298 + MIR SINE MIR 17 261 -1 2303 113 7 0 chr2 45457631 45457933 -205229921 - AluSg SINE Alu -6 304 1 1790 156 50 3 chr2 45457959 45458241 -205229613 + AluJb SINE Alu 1 295 -17 1466 193 24 31 chr2 45459135 45459425 -205228429 + AluJo SINE Alu 1 288 -24 628 336 173 15 chr2 45459454 45459859 -205227995 + L3 LINE CR1 1102 1570 -7 225 302 40 8 chr2 45460147 45460273 -205227581 + MARNA DNA Mariner 223 352 -234 280 187 220 44 chr2 45460276 45460367 -205227487 - MER94 DNA DNA 0 134 28 242 342 72 0 chr2 45460385 45460537 -205227317 + MARNA DNA Mariner 360 522 -64 21 36 0 0 chr2 45460650 45460678 -205227176 + AT_rich Low_complexity Low_complexity 1 28 0 261 30 45 45 chr2 45461180 45461246 -205226608 + (TTA)n Simple_repeat Simple_repeat 2 67 0 4411 173 30 30 chr2 45462798 45463867 -205223987 + L1MD2 LINE L1 5141 6205 -154 236 281 75 68 chr2 45464201 45464496 -205223358 - L1MC/D LINE L1 -1903 5905 5609 21 71 0 0 chr2 45465533 45465575 -205222279 + AT_rich Low_complexity Low_complexity 1 42 0 2264 103 3 10 chr2 45465986 45466297 -205221557 - AluSg1 SINE Alu 0 309 1 23 33 0 0 chr2 45467220 45467250 -205220604 + AT_rich Low_complexity Low_complexity 1 30 0 1661 161 74 0 chr2 45467549 45467834 -205220020 - AluJo SINE Alu -6 306 1 270 0 0 0 chr2 45467859 45467889 -205219965 + (A)n Simple_repeat Simple_repeat 1 30 0 229 275 121 27 chr2 45468931 45469080 -205218774 - L1MC/D LINE L1 -2036 5772 5610 324 0 0 0 chr2 45469080 45469116 -205218738 + (CA)n Simple_repeat Simple_repeat 2 37 0 1852 144 3 14 chr2 45469116 45469407 -205218447 - AluJo SINE Alu -24 288 1 2486 55 0 3 chr2 45471716 45472009 -205215845 - AluSc SINE Alu -17 292 1 963 173 0 35 chr2 45472159 45472332 -205215522 - FRAM SINE Alu -11 165 1 335 61 0 0 chr2 45472456 45472505 -205215349 - L1PA6 LINE L1 -3 6151 6103 214 225 0 0 chr2 45473472 45473512 -205214342 - L2 LINE L2 -4 3268 3229 205 178 0 0 chr2 45473778 45473823 -205214031 + T-rich Low_complexity Low_complexity 1 45 0 2242 105 10 3 chr2 45473825 45474131 -205213723 - AluSx SINE Alu -4 308 1 212 348 30 52 chr2 45476299 45476434 -205211420 - L2 LINE L2 0 3313 3182 1161 142 6 0 chr2 45476659 45476828 -205211026 - AluSg/x SINE Alu -11 301 132 2173 132 0 13 chr2 45477320 45477630 -205210224 + AluSx SINE Alu 3 308 -4 1570 113 52 118 chr2 45477664 45477743 -205210111 - MER47A DNA MER2_type -1957 366 283 2240 95 0 0 chr2 45477743 45478051 -205209803 + AluSx SINE Alu 1 308 0 1570 113 52 118 chr2 45478051 45478285 -205209569 - MER47A DNA MER2_type -2040 283 77 2174 121 27 0 chr2 45478285 45478583 -205209271 + AluSx SINE Alu 1 306 -6 1570 113 52 118 chr2 45478583 45478631 -205209223 - MER47A DNA MER2_type -2246 77 27 184 194 145 0 chr2 45479102 45479164 -205208690 + MIR SINE MIR 73 143 -119 348 219 26 52 chr2 45479408 45479563 -205208291 - L1ME4a LINE L1 -1 6120 5970 1763 174 7 7 chr2 45480776 45481069 -205206785 - AluSx SINE Alu -19 293 1 624 339 90 29 chr2 45682765 45683143 -205004711 + L3 LINE CR1 192 592 -985 2113 140 134 74 chr2 45683305 45683805 -205004049 + MER34C LTR ERV1 56 585 0 1473 149 45 26 chr2 45683807 45684075 -205003779 + AluJo SINE Alu 9 281 -31 922 192 81 94 chr2 45684154 45684459 -205003395 + LTR49 LTR ERV1 1 301 -294 318 222 19 0 chr2 45684459 45684567 -205003287 + AluY SINE Alu 2 111 -190 309 146 11 0 chr2 45685044 45685098 -205002756 + Alu SINE Alu 1 40 -262 270 119 0 0 chr2 45685102 45685144 -205002710 + Alu SINE Alu 252 293 -7 2129 95 14 0 chr2 45685199 45685495 -205002359 + AluY SINE Alu 1 300 -11 1626 102 0 0 chr2 45686890 45687115 -205000739 + AluSg/x SINE Alu 86 310 0 368 278 217 39 chr2 45687119 45687349 -205000505 - L2 LINE L2 -1355 1959 1689 6675 139 9 33 chr2 45687861 45688997 -204998857 - HERVH LTR ERV1 -5804 1909 801 2570 137 19 41 chr2 45689057 45689290 -204998564 - HERVH LTR ERV1 -7254 459 239 2278 80 0 7 chr2 45689290 45689589 -204998265 + AluSg SINE Alu 1 297 -13 2570 137 19 41 chr2 45689589 45689823 -204998031 - HERVH LTR ERV1 -7474 239 2 254 56 28 0 chr2 45689968 45690004 -204997850 - U2 snRNA snRNA -147 41 5 228 100 0 0 chr2 45690094 45690124 -204997730 - Alu SINE Alu -187 113 84 925 217 0 43 chr2 45690124 45690354 -204997500 - AluJo SINE Alu -92 220 1 436 0 51 0 chr2 45691255 45691314 -204996540 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 6323 80 13 47 chr2 45691314 45692682 -204995172 - SVA Other Other -551 1363 433 301 214 20 31 chr2 45693250 45693348 -204994506 + (CCG)n Simple_repeat Simple_repeat 2 98 0 312 308 55 11 chr2 45694758 45694849 -204993005 - L2 LINE L2 0 3272 3178 180 0 0 0 chr2 45695104 45695124 -204992730 + (TA)n Simple_repeat Simple_repeat 2 21 0 2126 89 3 3 chr2 45695540 45695832 -204992022 - AluY SINE Alu -19 292 1 771 164 0 57 chr2 45695835 45695975 -204991879 - AluJo/FLAM SINE Alu -170 132 1 729 258 52 21 chr2 45695983 45696309 -204991545 - L1MC4 LINE L1 0 8042 7707 2064 125 0 6 chr2 45696318 45696631 -204991223 - AluSx SINE Alu -1 311 1 1040 168 6 0 chr2 45696633 45696800 -204991054 + MLT1A1 LTR MaLR 198 365 0 800 153 23 0 chr2 45696834 45696965 -204990889 + AluJo SINE Alu 1 134 -178 2132 106 0 0 chr2 45697389 45697682 -204990172 - AluSq SINE Alu -20 293 1 180 284 62 62 chr2 45697930 45698011 -204989843 - L2 LINE L2 -610 2704 2624 304 250 75 99 chr2 45698101 45698227 -204989627 + L1MEd LINE L1 268 387 -5732 2281 99 3 0 chr2 45698227 45698529 -204989325 + AluSq SINE Alu 1 303 -10 304 250 75 99 chr2 45698529 45698654 -204989200 + L1MEd LINE L1 387 513 -5606 279 93 0 23 chr2 45698695 45698738 -204989116 + THE1C LTR MaLR 3 44 -331 940 160 102 39 chr2 45698895 45699110 -204988744 + LTR29 LTR ERV1 311 572 -50 4191 127 61 23 chr2 45699111 45699333 -204988521 - MER50 LTR ERV1 -23 711 499 2107 127 0 0 chr2 45699333 45699633 -204988221 - AluSx SINE Alu -12 300 1 4191 127 61 23 chr2 45699633 45700095 -204987759 - MER50 LTR ERV1 -235 499 1 2023 130 0 0 chr2 45700827 45701120 -204986734 - AluSx SINE Alu -19 293 1 567 171 0 0 chr2 45701142 45701230 -204986624 - AluJ/FLAM SINE Alu -223 89 2 1087 231 67 83 chr2 45701393 45701887 -204985967 - MER34 LTR ERV1 0 542 57 507 212 68 0 chr2 45702060 45702178 -204985676 + FAM SINE Alu 42 167 -18 1554 114 97 63 chr2 45702183 45702482 -204985372 + AluSx SINE Alu 1 309 -3 272 358 20 34 chr2 45702488 45702636 -204985218 - L2 LINE L2 -191 3081 2936 1703 157 4 4 chr2 45702848 45703115 -204984739 + MER31A LTR ERV1 1 267 -218 219 103 0 0 chr2 45703124 45703153 -204984701 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 665 191 6 17 chr2 45703153 45703331 -204984523 + CT-rich Low_complexity Low_complexity 2 177 0 1577 175 15 0 chr2 45703339 45703613 -204984241 - AluJo SINE Alu -34 278 1 1237 114 27 41 chr2 45703614 45703833 -204984021 + MER31A LTR ERV1 270 485 0 980 290 96 6 chr2 45703833 45704187 -204983667 + MLT1L LTR MaLR 229 615 0 1058 88 0 0 chr2 45704201 45704337 -204983517 + AluSq/x SINE Alu 1 136 -176 2175 109 0 0 chr2 45704337 45704641 -204983213 + AluSx SINE Alu 1 304 -8 544 148 0 11 chr2 45704672 45704760 -204983094 - FLAM SINE Alu -19 124 38 2189 109 0 6 chr2 45705468 45705780 -204982074 + AluSx SINE Alu 1 310 -2 305 258 70 47 chr2 45706793 45706921 -204980933 + L1MC4 LINE L1 6574 6704 -1338 * 330 236 18 64 chr2 45706835 45706945 -204980909 - L1MCa LINE L1 -4374 2052 1948 25 0 0 0 chr2 45706945 45706970 -204980884 + AT_rich Low_complexity Low_complexity 1 25 0 306 0 0 0 chr2 45706983 45707017 -204980837 + (TA)n Simple_repeat Simple_repeat 1 34 0 1575 149 62 4 chr2 45707017 45707293 -204980561 - AluJb SINE Alu -14 298 7 2035 136 0 0 chr2 45707303 45707611 -204980243 - AluSx SINE Alu -4 308 1 1977 216 137 30 chr2 45707641 45708205 -204979649 - MLT1E3 LTR MaLR 0 624 1 2175 107 0 0 chr2 45708320 45708620 -204979234 - AluSg SINE Alu -10 300 1 235 127 18 36 chr2 45708706 45708761 -204979093 + CT-rich Low_complexity Low_complexity 3 56 0 2082 123 10 0 chr2 45708763 45709071 -204978783 - AluSx SINE Alu 0 312 2 1194 218 33 19 chr2 45709640 45709911 -204977943 + MER90 LTR ERV1 304 578 -36 404 177 0 0 chr2 45709933 45709995 -204977859 - AluJb SINE Alu -124 188 127 973 236 62 42 chr2 45710040 45710328 -204977526 + MER97b DNA MER1_type? 184 477 -576 286 186 17 0 chr2 45710400 45710459 -204977395 + MER97c DNA MER1_type? 484 543 -547 797 138 0 0 chr2 45710921 45711037 -204976817 + AluJb SINE Alu 2 117 -195 189 0 0 0 chr2 45711037 45711058 -204976796 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 348 296 31 6 chr2 45711077 45711236 -204976618 + MER97b DNA MER1_type? 886 1048 -5 321 387 72 21 chr2 45711266 45711501 -204976353 + L2 LINE L2 2951 3197 -75 1999 144 3 0 chr2 45711687 45711992 -204975862 - AluSx SINE Alu -6 306 1 748 160 6 28 chr2 45712029 45712210 -204975644 + CT-rich Low_complexity Low_complexity 4 180 0 1564 169 4 0 chr2 45712210 45712476 -204975378 - AluJb SINE Alu -45 267 1 915 109 0 34 chr2 45712963 45713110 -204974744 + FLAM_C SINE Alu 1 142 -1 1353 199 6 37 chr2 45713112 45713433 -204974421 + AluJo SINE Alu 1 311 -1 1005 105 0 0 chr2 45714443 45714576 -204973278 + AluSq/x SINE Alu 1 133 -180 458 180 0 30 chr2 45714580 45714680 -204973174 + LTR7 LTR ERV1 347 443 -7 4105 33 21 10 chr2 45714835 45715357 -204972497 - SVA Other Other -858 528 1 1264 219 107 39 chr2 45715641 45716148 -204971706 - MLT2E LTR ERVL -15 613 3 2115 103 0 32 chr2 45716237 45716549 -204971305 - AluSx SINE Alu -10 302 1 715 125 8 47 chr2 45717453 45717601 -204970253 + FLAM_C SINE Alu 3 133 0 369 0 0 0 chr2 45717933 45717974 -204969880 + (CA)n Simple_repeat Simple_repeat 2 42 0 893 139 29 0 chr2 45718003 45718140 -204969714 + AluSq/x SINE Alu 1 141 -172 930 223 0 0 chr2 45718142 45718326 -204969528 + L1M4 LINE L1 5484 5667 -511 1933 149 0 0 chr2 45718327 45718616 -204969238 + AluSx SINE Alu 1 289 -23 1641 170 30 12 chr2 45718665 45719053 -204968801 - L1M2 LINE L1 -743 5403 5034 * 2157 137 36 80 chr2 45719049 45719334 -204968520 + L1MA5 LINE L1 5460 5715 -585 1553 135 79 0 chr2 45719334 45719601 -204968253 + AluSx SINE Alu 5 292 -20 2157 137 36 80 chr2 45719601 45719818 -204968036 + L1MA5 LINE L1 5715 5940 -360 366 200 50 0 chr2 45719999 45720079 -204967775 + MARNA DNA Mariner 279 362 -224 2164 82 6 58 chr2 45720644 45720973 -204966881 + AluSx SINE Alu 1 312 0 188 277 21 0 chr2 45721232 45721279 -204966575 + L2 LINE L2 3223 3270 -2 180 286 24 0 chr2 45721300 45721342 -204966512 - MIR3 SINE MIR -33 175 133 307 308 0 0 chr2 45721462 45721540 -204966314 - L3b LINE CR1 -207 1376 1299 1606 162 55 82 chr2 45721562 45721963 -204965891 + MLT1B LTR MaLR 1 390 0 2198 108 0 13 chr2 45722738 45723045 -204964809 - AluSx SINE Alu -9 303 1 240 306 28 56 chr2 45723661 45723721 -204964133 - MIR3 SINE MIR -22 186 129 2112 143 36 33 chr2 45723721 45724084 -204963770 - THE1B LTR MaLR 0 364 1 240 306 28 56 chr2 45724084 45724131 -204963723 - MIR3 SINE MIR -79 129 82 1804 158 3 10 chr2 45724207 45724517 -204963337 + AluJb SINE Alu 1 308 -4 355 329 73 26 chr2 45724646 45724880 -204962974 + L3 LINE CR1 1039 1283 -294 359 117 33 33 chr2 45725575 45725635 -204962219 + MER91B DNA MER1_type 4 63 -127 2143 93 21 0 chr2 45725870 45726160 -204961694 - AluSx SINE Alu -16 296 1 296 79 0 0 chr2 45727307 45727345 -204960509 - THE1-int LTR MaLR -125 1455 1418 22 35 0 0 chr2 45727346 45727375 -204960479 + GC_rich Low_complexity Low_complexity 1 29 0 430 272 37 58 chr2 45727519 45727668 -204960186 + MER5A DNA MER1_type 3 149 -40 2374 76 0 0 chr2 45727668 45727969 -204959885 - AluSx SINE Alu -11 301 1 430 272 37 58 chr2 45727969 45728010 -204959844 + MER5A DNA MER1_type 149 189 0 361 217 58 10 chr2 45728606 45728721 -204959133 + MIR SINE MIR 39 154 -63 888 201 112 12 chr2 45728943 45729045 -204958809 + Charlie4a DNA MER1_type 222 312 -1649 2153 99 7 0 chr2 45729045 45729337 -204958517 + AluSg SINE Alu 1 294 -16 888 201 112 12 chr2 45729337 45729483 -204958371 + Charlie4a DNA MER1_type 312 495 -13 2299 75 0 0 chr2 45730224 45730519 -204957335 + AluY SINE Alu 1 295 -16 2340 72 0 7 chr2 45730698 45731002 -204956852 + AluSq SINE Alu 5 306 -7 183 333 196 0 chr2 45731595 45731748 -204956106 + L2 LINE L2 2131 2313 -1001 264 30 0 0 chr2 45732762 45732795 -204955059 + (CAA)n Simple_repeat Simple_repeat 2 34 0 639 0 0 0 chr2 45733271 45733342 -204954512 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 2304 89 10 0 chr2 45733350 45733642 -204954212 - AluSq SINE Alu -18 295 1 393 320 30 40 chr2 45733866 45734066 -204953788 + MLT1J LTR MaLR 5 202 -309 265 310 43 60 chr2 45734143 45734319 -204953535 + MLT1J LTR MaLR 224 396 -115 550 159 6 27 chr2 45734319 45734456 -204953398 - MER53 DNA DNA 0 189 1 2347 75 0 40 chr2 45734577 45734898 -204952956 - AluSg1 SINE Alu -1 308 1 1625 181 39 0 chr2 45734902 45735183 -204952671 - AluJb SINE Alu -20 292 1 1095 119 19 19 chr2 45735220 45735380 -204952474 - AluSq SINE Alu -95 218 59 184 211 26 0 chr2 45736490 45736528 -204951326 + MIR SINE MIR 122 160 -102 247 189 14 81 chr2 45736548 45736622 -204951232 + MIR SINE MIR 122 190 -72 2128 121 0 26 chr2 45737191 45737497 -204950357 + AluSx SINE Alu 8 305 -7 299 205 169 0 chr2 45737497 45737580 -204950274 + MIR SINE MIR 48 144 -64 2091 96 24 7 chr2 45737586 45737878 -204949976 + AluSg SINE Alu 2 298 -12 798 216 13 70 chr2 45738316 45738543 -204949311 + MER67C LTR ERV1 123 336 -374 1324 237 70 13 chr2 45738562 45738934 -204948920 + MSTD LTR MaLR 2 394 -2 1132 144 10 10 chr2 45738939 45739134 -204948720 + MER67C LTR ERV1 516 710 0 474 240 35 146 chr2 45739237 45739524 -204948330 + MIR SINE MIR 8 262 0 27 0 0 0 chr2 45739618 45739645 -204948209 + AT_rich Low_complexity Low_complexity 1 27 0 377 306 60 23 chr2 45739872 45739944 -204947910 - L1MC4a LINE L1 -1897 5911 5843 3374 120 12 64 chr2 45739944 45740307 -204947547 - LTR26B LTR ERV1 0 531 206 1957 155 26 0 chr2 45740307 45740610 -204947244 - AluSx SINE Alu -1 311 1 3374 120 12 64 chr2 45740610 45740806 -204947048 - LTR26B LTR ERV1 -325 206 1 377 306 60 23 chr2 45740806 45740949 -204946905 - L1MC4a LINE L1 -1965 5843 5688 291 294 80 40 chr2 45741002 45741259 -204946595 - L1MC4a LINE L1 -568 5553 5283 2266 88 0 52 chr2 45741259 45741587 -204946267 - AluSx SINE Alu -1 311 1 291 294 80 40 chr2 45741587 45741605 -204946249 - L1MC4a LINE L1 -838 5283 5267 246 269 0 0 chr2 45741944 45741996 -204945858 - MLT1A1 LTR MaLR -147 218 167 1156 158 20 20 chr2 45741997 45742193 -204945661 - MLT1A1 LTR MaLR -169 196 1 278 337 60 41 chr2 45742403 45742857 -204944997 - L2 LINE L2 -224 3048 2508 2230 107 3 0 chr2 45742857 45743146 -204944708 + AluSx SINE Alu 1 290 -22 278 337 60 41 chr2 45743146 45743283 -204944571 - L2 LINE L2 -764 2508 2375 758 202 0 0 chr2 45743480 45743609 -204944245 - FLAM_C SINE Alu 0 133 5 516 239 7 43 chr2 45743641 45743779 -204944075 - MLT1K LTR MaLR -314 274 142 379 266 81 16 chr2 45743908 45744032 -204943822 + L2 LINE L2 3182 3313 0 1023 205 37 19 chr2 45744333 45744548 -204943306 + MER20 DNA MER1_type 1 219 0 1449 164 118 8 chr2 45744764 45745027 -204942827 + AluSg1 SINE Alu 1 292 -17 218 243 122 2 chr2 45745701 45745821 -204942033 + MIR SINE MIR 30 162 -78 505 227 109 0 chr2 45745969 45746097 -204941757 - FRAM SINE Alu -1 175 34 1577 162 26 0 chr2 45746934 45747206 -204940648 + AluJb SINE Alu 30 308 -4 1763 117 104 0 chr2 45747480 45747729 -204940125 + AluSx SINE Alu 21 295 -17 1400 161 85 31 chr2 45747927 45748209 -204939645 - AluJb SINE Alu 0 308 13 2064 126 0 3 chr2 45748225 45748545 -204939309 - AluSx SINE Alu 0 319 1 278 277 0 10 chr2 45748555 45748656 -204939198 - L1ME LINE L1 -299 5822 5723 191 367 50 17 chr2 45749392 45749512 -204938342 + L2 LINE L2 3133 3256 -16 695 255 42 19 chr2 45749632 45749844 -204938010 + MIR SINE MIR 29 245 -17 1751 142 106 3 chr2 45750107 45750389 -204937465 - AluJb SINE Alu -1 311 1 1997 149 10 3 chr2 45750739 45751041 -204936813 + AluSx SINE Alu 1 304 -8 288 324 66 53 chr2 45751223 45751603 -204936251 - L2 LINE L2 -81 3191 2807 2458 83 52 19 chr2 45752391 45752754 -204935100 - THE1C LTR MaLR 0 375 1 10144 102 36 16 chr2 45752755 45752847 -204935007 - THE1C-int LTR MaLR -1 1579 1490 2336 105 3 0 chr2 45752847 45753152 -204934702 + AluSx SINE Alu 5 310 -2 10144 102 36 16 chr2 45753152 45754513 -204933341 - THE1C-int LTR MaLR -90 1490 97 23 0 0 0 chr2 45754926 45754949 -204932905 + AT_rich Low_complexity Low_complexity 1 23 0 766 139 28 39 chr2 45755038 45755218 -204932636 - SVA Other Other -710 676 499 1216 185 120 51 chr2 45755218 45755569 -204932285 + LTR48 LTR ERV1 81 455 -332 678 201 105 24 chr2 45755586 45755795 -204932059 + LTR48B LTR ERV1 386 611 -33 639 233 82 78 chr2 45755838 45755993 -204931861 - LTR16A LTR ERVL -54 396 238 2126 127 0 7 chr2 45755993 45756292 -204931562 + AluSx SINE Alu 1 297 -15 639 233 82 78 chr2 45756292 45756355 -204931499 - LTR16A LTR ERVL -212 238 177 2149 100 6 45 chr2 45757003 45757167 -204930687 - AluSx SINE Alu -13 299 151 2527 73 0 0 chr2 45757167 45757468 -204930386 - AluY SINE Alu -10 301 1 2149 100 6 45 chr2 45757468 45757614 -204930240 - AluSx SINE Alu -161 151 1 2134 107 13 10 chr2 45757679 45757979 -204929875 - AluSp SINE Alu -12 301 1 1520 177 43 14 chr2 45758039 45758316 -204929538 + AluJo SINE Alu 7 291 -21 2626 134 32 21 chr2 45758653 45759123 -204928731 + L1MA5 LINE L1 5825 6299 -1 217 241 116 0 chr2 45759178 45759252 -204928602 - MIR SINE MIR -64 144 63 2125 146 0 0 chr2 45759369 45759678 -204928176 + AluSx SINE Alu 1 309 -3 816 154 8 0 chr2 45759716 45759839 -204928015 + FAM SINE Alu 41 164 -21 2017 138 11 0 chr2 45759868 45760150 -204927704 + AluSx SINE Alu 1 285 -27 231 114 0 0 chr2 45760150 45760185 -204927669 + (CA)n Simple_repeat Simple_repeat 2 36 0 256 130 0 43 chr2 45760387 45760427 -204927427 + MER3 DNA MER1_type 1 39 -165 1369 180 72 13 chr2 45760427 45760733 -204927121 + MER33 DNA MER1_type 1 324 0 2325 122 0 0 chr2 45760744 45761047 -204926807 - AluSx SINE Alu -9 303 1 619 286 27 35 chr2 45761097 45761356 -204926498 + MIR SINE MIR 6 262 0 243 0 0 0 chr2 45761527 45761554 -204926300 + (TG)n Simple_repeat Simple_repeat 1 27 0 2080 139 10 3 chr2 45762141 45762443 -204925411 + AluSx SINE Alu 1 304 -8 1830 116 102 32 chr2 45762449 45762733 -204925121 + AluSx SINE Alu 1 304 -8 378 0 0 0 chr2 45762897 45762939 -204924915 + (TG)n Simple_repeat Simple_repeat 2 43 0 978 166 0 0 chr2 45763115 45763266 -204924588 - FRAM SINE Alu -25 151 1 194 184 0 0 chr2 45763291 45763329 -204924525 - L2 LINE L2 -2 3311 3274 834 156 21 11 chr2 45763399 45763585 -204924269 - L1MA7 LINE L1 0 6291 6104 2190 129 0 3 chr2 45764951 45765260 -204922594 + AluSx SINE Alu 3 310 -2 312 288 32 8 chr2 45765383 45765508 -204922346 - MIR3 SINE MIR -14 194 67 220 204 0 0 chr2 45766142 45766196 -204921658 + T-rich Low_complexity Low_complexity 1 54 0 460 147 0 173 chr2 45766215 45766243 -204921611 - MER113 DNA MER1_type? -397 124 93 2298 108 0 0 chr2 45766243 45766540 -204921314 + AluSx SINE Alu 1 297 -15 460 147 0 173 chr2 45766540 45766566 -204921288 - MER113 DNA MER1_type? -428 93 64 1731 166 0 20 chr2 45766566 45766884 -204920970 + AluJo SINE Alu 1 312 0 460 147 0 173 chr2 45766884 45766978 -204920876 - MER113 DNA MER1_type? -457 64 1 2372 96 0 0 chr2 45767045 45767337 -204920517 - AluSg SINE Alu -18 292 1 279 245 47 57 chr2 45767337 45767443 -204920411 + MER112 DNA MER1_type 38 142 -118 1399 163 18 98 chr2 45767533 45767859 -204919995 - AluJo SINE Alu -12 300 1 239 309 72 22 chr2 45767897 45768036 -204919818 + L2 LINE L2 2561 2706 -608 1792 152 25 3 chr2 45768047 45768330 -204919524 + AluJo SINE Alu 5 293 -19 2212 112 10 0 chr2 45768744 45769039 -204918815 + AluSx SINE Alu 1 298 -14 207 264 0 0 chr2 45769416 45769469 -204918385 - L2 LINE L2 -4 3309 3257 327 180 90 67 chr2 45769469 45769558 -204918296 + 7SLRNA srpRNA srpRNA 221 311 -9 2250 61 20 10 chr2 45769819 45770112 -204917742 + AluY SINE Alu 8 303 -8 2302 82 36 7 chr2 45770209 45770513 -204917341 + AluSq SINE Alu 1 313 0 481 214 57 99 chr2 45770535 45770797 -204917057 + L1MEd LINE L1 753 1003 -5116 1223 182 50 14 chr2 45771296 45771614 -204916240 + MSTD LTR MaLR 1 391 -5 6687 231 63 29 chr2 45771617 45772128 -204915726 + MSTD-int LTR MaLR 2 494 -1241 2116 128 7 0 chr2 45772128 45772418 -204915436 - AluSx SINE Alu -20 292 1 6687 231 63 29 chr2 45772418 45773441 -204914413 + MSTD-int LTR MaLR 494 1599 -136 1946 155 3 3 chr2 45773441 45773751 -204914103 - AluJb SINE Alu -2 310 1 6687 231 63 29 chr2 45773751 45773888 -204913966 + MSTD-int LTR MaLR 1599 1730 -5 283 73 98 0 chr2 45773890 45773931 -204913923 + MSTD LTR MaLR 1 45 -383 1206 210 135 0 chr2 45773959 45774273 -204913581 + MSTD LTR MaLR 35 392 -4 1860 136 11 0 chr2 45774273 45774545 -204913309 + AluSx SINE Alu 1 275 -37 210 37 0 0 chr2 45774549 45774576 -204913278 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1473 150 9 0 chr2 45774657 45774877 -204912977 + AluSg/x SINE Alu 84 305 -7 2319 212 78 118 chr2 45775404 45775599 -204912255 + L1ME3A LINE L1 5195 5396 -774 2360 75 0 0 chr2 45775599 45775942 -204911912 + AluY SINE Alu 1 343 0 495 0 33 0 chr2 45775881 45775967 -204911887 + (TAAA)n Simple_repeat Simple_repeat 2 89 0 2319 212 78 118 chr2 45775942 45775976 -204911878 + L1ME3A LINE L1 5396 5430 -740 2518 66 3 0 chr2 45775976 45776280 -204911574 + AluY SINE Alu 1 305 -6 2319 212 78 118 chr2 45776280 45776763 -204911091 + L1ME3A LINE L1 5430 5931 -239 222 62 0 0 chr2 45776763 45776795 -204911059 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 451 117 0 0 chr2 45776801 45776861 -204910993 - U6 snRNA snRNA -9 98 39 2319 212 78 118 chr2 45776861 45777116 -204910738 + L1ME3A LINE L1 5936 6162 -8 385 280 8 25 chr2 45777284 45777402 -204910452 + MIR SINE MIR 101 216 -46 1727 190 7 0 chr2 45777554 45777849 -204910005 - AluJo SINE Alu -15 297 1 322 243 14 0 chr2 45778095 45778165 -204909689 - MLT1K LTR MaLR 0 588 518 2138 92 24 20 chr2 45779194 45779486 -204908368 - AluSx SINE Alu -19 293 1 22 0 0 0 chr2 45780466 45780488 -204907366 + AT_rich Low_complexity Low_complexity 1 22 0 2128 113 3 17 chr2 45780629 45780931 -204906923 - AluSx SINE Alu -10 302 5 944 75 22 0 chr2 45781137 45781271 -204906583 - L1PA14 LINE L1 -3 6158 6022 2325 101 7 0 chr2 45781276 45781583 -204906271 - AluSp SINE Alu -4 309 1 1729 202 3 0 chr2 45781587 45781884 -204905970 - AluJo SINE Alu -14 298 1 2358 103 0 3 chr2 45781896 45782198 -204905656 - AluSq SINE Alu -12 301 1 2257 110 0 0 chr2 45782285 45782577 -204905277 - AluSc SINE Alu -13 296 5 1131 236 10 55 chr2 45782781 45782834 -204905020 - MLT1L LTR MaLR 0 615 561 2016 122 59 0 chr2 45782834 45783121 -204904733 + AluSx SINE Alu 2 305 -7 1131 236 10 55 chr2 45783121 45783360 -204904494 - MLT1L LTR MaLR -54 561 336 791 254 42 5 chr2 45783364 45783581 -204904273 - MIR SINE MIR -4 258 34 578 270 13 13 chr2 45783685 45783844 -204904010 - MLT1L LTR MaLR -364 251 93 34 55 0 0 chr2 45784099 45784154 -204903700 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr2 45784396 45784417 -204903437 + AT_rich Low_complexity Low_complexity 1 21 0 2449 79 0 0 chr2 45785173 45785464 -204902390 - AluSc SINE Alu -18 291 1 951 280 109 16 chr2 45785683 45786241 -204901613 + L1MC5 LINE L1 7301 7910 -51 396 0 0 0 chr2 45786246 45786290 -204901564 + (CA)n Simple_repeat Simple_repeat 2 45 0 1857 106 34 65 chr2 45786666 45786986 -204900868 + AluSx SINE Alu 1 311 0 381 275 16 47 chr2 45787148 45787341 -204900513 + L2 LINE L2 2138 2324 -990 812 228 123 9 chr2 45787477 45787696 -204900158 - MLT1J LTR MaLR -249 262 19 508 156 104 0 chr2 45787839 45787935 -204899919 + MER53 DNA DNA 1 106 -83 458 314 83 26 chr2 45787969 45788355 -204899499 + L2 LINE L2 2439 2846 -468 887 158 0 0 chr2 45788446 45788579 -204899275 - FLAM_A SINE Alu 0 133 1 236 278 14 0 chr2 45788650 45788722 -204899132 + L2 LINE L2 2964 3036 -236 2374 91 13 0 chr2 45788723 45789021 -204898833 + AluSx SINE Alu 11 312 0 452 344 91 9 chr2 45789036 45789266 -204898588 + L2 LINE L2 3022 3270 -2 22 0 0 0 chr2 45790077 45790099 -204897755 + AT_rich Low_complexity Low_complexity 1 22 0 228 184 0 0 chr2 45791135 45791184 -204896670 + A-rich Low_complexity Low_complexity 2 50 0 466 260 137 25 chr2 45791667 45791871 -204895983 + MIR SINE MIR 23 249 -13 278 288 45 9 chr2 45791945 45791984 -204895870 + MER103 DNA DNA 2 38 -128 2304 88 3 7 chr2 45791984 45792280 -204895574 - AluSc SINE Alu -14 295 1 278 288 45 9 chr2 45792280 45792351 -204895503 + MER103 DNA DNA 38 116 -50 1880 188 0 0 chr2 45792468 45792772 -204895082 + AluJb SINE Alu 1 304 -8 382 239 208 13 chr2 45792906 45793065 -204894789 + MIR SINE MIR 6 195 -67 652 228 99 47 chr2 45793500 45793733 -204894121 - MIR SINE MIR -13 249 5 1152 295 79 18 chr2 45795083 45795476 -204892378 + LTR16A LTR ERVL 16 432 -18 2003 148 0 0 chr2 45795687 45795992 -204891862 + AluSx SINE Alu 1 305 0 2136 92 14 7 chr2 45795993 45796314 -204891540 + AluY SINE Alu 2 311 0 182 341 80 11 chr2 45796460 45796548 -204891306 + MIR SINE MIR 88 181 -81 200 286 20 20 chr2 45796945 45796994 -204890860 + L2 LINE L2 3127 3175 -97 637 148 52 0 chr2 45797164 45797279 -204890575 - AluSg/x SINE Alu 0 310 190 392 303 139 36 chr2 45797645 45797982 -204889872 + L2 LINE L2 2245 2616 -698 2179 116 0 7 chr2 45797989 45798274 -204889580 - AluSx SINE Alu -27 285 3 234 286 22 55 chr2 45798534 45798625 -204889229 + MER97b DNA MER1_type? 1 88 -965 219 321 43 43 chr2 45800291 45800431 -204887423 - L2 LINE L2 0 3272 3133 266 188 0 43 chr2 45801417 45801486 -204886368 + GA-rich Low_complexity Low_complexity 2 67 0 2123 122 0 22 chr2 45801550 45801862 -204885992 - AluSx SINE Alu -7 305 1 524 216 41 0 chr2 45801895 45802040 -204885814 - MIR SINE MIR -63 145 35 200 0 95 48 chr2 45802070 45802112 -204885742 + (TTAG)n Simple_repeat Simple_repeat 1 44 0 286 279 52 21 chr2 45802112 45802270 -204885584 + LTR33A LTR ERVL 1 153 -370 809 227 123 19 chr2 45802300 45802560 -204885294 + LTR33 LTR ERVL 235 521 0 210 128 0 0 chr2 45802684 45802723 -204885131 + (TC)n Simple_repeat Simple_repeat 1 39 0 360 0 0 0 chr2 45802723 45802763 -204885091 + (TG)n Simple_repeat Simple_repeat 1 40 0 416 262 108 58 chr2 45803834 45804046 -204883808 + MIR SINE MIR 16 248 -14 834 259 68 15 chr2 45804129 45804392 -204883462 - MLT1L LTR MaLR -2 613 337 243 43 21 43 chr2 45804408 45804455 -204883399 + (TTTCC)n Simple_repeat Simple_repeat 4 49 0 2213 112 10 0 chr2 45804457 45804760 -204883094 - AluSp SINE Alu -3 310 5 246 265 142 49 chr2 45804765 45804927 -204882927 - MLT1L LTR MaLR -304 311 135 1524 206 72 51 chr2 45804968 45805399 -204882455 + MSTB2 LTR MaLR 18 457 0 975 157 30 102 chr2 45806409 45806644 -204881210 + MER20 DNA MER1_type 2 219 0 21 0 0 0 chr2 45807046 45807067 -204880787 + AT_rich Low_complexity Low_complexity 1 21 0 785 243 171 22 chr2 45807315 45807719 -204880135 - HAL1 LINE L1 -19 2488 2025 1884 167 17 3 chr2 45807774 45808074 -204879780 + AluJb SINE Alu 1 304 -8 1851 170 0 0 chr2 45808281 45808570 -204879284 + AluJb SINE Alu 2 290 -22 2285 104 7 0 chr2 45810371 45810670 -204877184 - AluSx SINE Alu -11 301 1 234 320 203 27 chr2 45810890 45811022 -204876832 + L2 LINE L2 2239 2347 -967 2433 94 3 0 chr2 45811022 45811330 -204876524 - AluSx SINE Alu -3 309 1 234 320 203 27 chr2 45811330 45811744 -204876110 + L2 LINE L2 2347 2881 -433 270 346 124 10 chr2 45811803 45812005 -204875849 + L2 LINE L2 2970 3194 -78 347 240 31 0 chr2 45812140 45812236 -204875618 + MIR SINE MIR 148 246 -16 405 296 30 8 chr2 45812611 45812743 -204875111 - MER5B DNA MER1_type -40 138 4 2084 123 7 0 chr2 45813660 45813960 -204873894 + AluSg1 SINE Alu 1 302 -7 1733 179 37 7 chr2 45813969 45814265 -204873589 + AluJb SINE Alu 1 305 -7 2084 118 14 0 chr2 45815961 45816250 -204871604 + AluSx SINE Alu 1 293 -19 303 49 0 0 chr2 45816260 45816301 -204871553 + (GA)n Simple_repeat Simple_repeat 2 42 0 635 115 0 0 chr2 45816303 45816390 -204871464 - AluJ/FLAM SINE Alu -224 88 2 518 314 60 12 chr2 45816391 45816639 -204871215 - MIR SINE MIR -1 261 2 183 265 0 0 chr2 45816796 45816845 -204871009 - L3 LINE CR1 -1 1576 1528 2362 72 10 20 chr2 45817187 45817491 -204870363 - AluSq SINE Alu -12 301 1 3636 96 36 29 chr2 45817683 45818077 -204869777 - MER41A LTR ERV1 0 554 153 2059 102 14 7 chr2 45818077 45818372 -204869482 - AluSq SINE Alu -16 297 1 3636 96 36 29 chr2 45818372 45818527 -204869327 - MER41A LTR ERV1 -401 153 1 298 268 12 0 chr2 45818556 45818638 -204869216 - L2 LINE L2 -5 3267 3185 2078 102 7 11 chr2 45818645 45818959 -204868895 + AluSq SINE Alu 1 313 0 404 281 29 19 chr2 45819742 45819901 -204867953 - MLT1J1 LTR MaLR -250 261 61 1735 179 17 25 chr2 45820553 45820911 -204866943 + MSTB LTR MaLR 2 356 -70 2345 115 0 0 chr2 45823503 45823808 -204864046 + AluSx SINE Alu 1 305 -7 1425 168 84 8 chr2 45824600 45824862 -204862992 + AluJo SINE Alu 1 282 -30 759 181 69 0 chr2 45824989 45825133 -204862721 + AluSq SINE Alu 2 155 -158 203 184 0 0 chr2 45825339 45825377 -204862477 + T-rich Low_complexity Low_complexity 1 38 0 2016 140 3 3 chr2 45825615 45825907 -204861947 + AluSx SINE Alu 1 292 -20 2008 127 14 3 chr2 45826927 45827219 -204860635 + AluSx SINE Alu 1 295 -17 189 243 135 40 chr2 45827398 45827472 -204860382 - L2 LINE L2 -17 3296 3216 2363 101 0 0 chr2 45827740 45828038 -204859816 - AluSg SINE Alu -12 298 1 2004 83 8 0 chr2 45828780 45829034 -204858820 - AluSx SINE Alu -56 256 1 2331 84 10 3 chr2 45829373 45829671 -204858183 - AluSq SINE Alu -13 300 1 373 259 125 83 chr2 45829832 45829866 -204857988 - L1ME LINE L1 -359 5811 5780 1809 157 7 13 chr2 45829866 45830165 -204857689 - AluJb SINE Alu -7 305 9 373 259 125 83 chr2 45830165 45830398 -204857456 - L1ME LINE L1 -390 5780 5558 258 32 0 0 chr2 45830398 45830429 -204857425 + (TA)n Simple_repeat Simple_repeat 2 32 0 2202 102 3 10 chr2 45830429 45830723 -204857131 - AluSq SINE Alu -21 292 1 373 259 125 83 chr2 45830723 45830742 -204857112 - L1ME LINE L1 -611 5559 5511 996 198 101 30 chr2 45830746 45830926 -204856928 - MER33 DNA MER1_type -2262 323 112 2018 150 48 25 chr2 45830926 45831280 -204856574 + THE1B LTR MaLR 1 362 -2 996 198 101 30 chr2 45831280 45831397 -204856457 - MER33 DNA MER1_type -2473 112 5 2522 80 0 0 chr2 45831680 45831982 -204855872 + AluSq SINE Alu 1 302 -11 1045 172 0 0 chr2 45832568 45832731 -204855123 - FRAM SINE Alu -16 160 1 1619 187 24 14 chr2 45832908 45833202 -204854652 - AluJo SINE Alu -15 297 1 2351 101 0 9 chr2 45834198 45834514 -204853340 - AluSp SINE Alu 0 313 1 783 231 32 56 chr2 45835653 45835689 -204852165 + MIR SINE MIR 29 64 -198 2410 76 0 0 chr2 45835689 45835991 -204851863 - AluY SINE Alu -9 302 1 783 231 32 56 chr2 45835991 45836170 -204851684 + MIR SINE MIR 64 239 -23 1237 282 62 16 chr2 45836188 45836639 -204851215 + L2 LINE L2 1919 2390 -924 1017 206 123 26 chr2 45836666 45837049 -204850805 + Charlie4a DNA MER1_type 1 420 -88 424 202 116 0 chr2 45837052 45837181 -204850673 - L1ME3A LINE L1 -198 5972 5829 1810 160 0 20 chr2 45838328 45838628 -204849226 - AluJo SINE Alu -18 294 1 263 208 26 0 chr2 45838630 45838707 -204849147 - HAL1 LINE L1 -168 2339 2261 2774 129 45 99 chr2 45838826 45839463 -204848391 - L1MB2 LINE L1 -4 6167 5565 271 303 104 42 chr2 45839454 45839695 -204848159 - HAL1 LINE L1 -1054 1453 1198 * 2288 79 0 3 chr2 45839712 45840003 -204847851 - AluY SINE Alu -21 290 1 1589 206 4 4 chr2 45840366 45840647 -204847207 - AluJb SINE Alu -29 283 3 645 92 0 0 chr2 45840651 45840749 -204847105 + (TTCC)n Simple_repeat Simple_repeat 1 98 0 186 146 36 18 chr2 45840736 45840791 -204847063 + CT-rich Low_complexity Low_complexity 1 56 0 * 234 106 43 0 chr2 45840812 45840859 -204846995 - MSTB1 LTR MaLR -186 246 198 1444 170 0 13 chr2 45840895 45841125 -204846729 - AluJb SINE Alu -85 227 1 2107 109 33 3 chr2 45841414 45841718 -204846136 - AluSq SINE Alu 0 313 1 373 242 24 147 chr2 45841730 45841941 -204845913 - HAL1 LINE L1 -2319 188 4 2111 116 10 13 chr2 45842109 45842412 -204845442 - AluSx SINE Alu -10 302 1 2237 107 0 7 chr2 45843157 45843467 -204844387 - AluSg SINE Alu -2 308 1 338 236 8 79 chr2 45843713 45843840 -204844014 - HAL1 LINE L1 -986 1521 1404 192 40 0 0 chr2 45844114 45844139 -204843715 + (TTATG)n Simple_repeat Simple_repeat 1 25 0 417 20 0 0 chr2 45844140 45844190 -204843664 + (TATTG)n Simple_repeat Simple_repeat 1 50 0 2110 104 7 0 chr2 45844190 45844469 -204843385 - AluSx SINE Alu -31 281 1 4008 133 17 10 chr2 45844479 45844496 -204843358 - L1MA7 LINE L1 -226 6065 6050 511 186 16 8 chr2 45844496 45844625 -204843229 - L1MA7 LINE L1 -7 6284 6155 4008 133 17 10 chr2 45844625 45845314 -204842540 - L1MA7 LINE L1 -241 6050 5354 451 298 126 41 chr2 45845310 45845345 -204842509 - HAL1 LINE L1 -1430 1077 1046 * 1312 194 35 76 chr2 45845345 45845520 -204842334 - AluJo SINE Alu -10 302 144 2279 106 3 6 chr2 45845520 45845831 -204842023 - AluSx SINE Alu -1 311 2 1312 194 35 76 chr2 45845831 45845970 -204841884 - AluJo SINE Alu -168 144 1 258 32 0 0 chr2 45845974 45846005 -204841849 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 451 298 126 41 chr2 45846005 45846395 -204841459 - HAL1 LINE L1 -1463 1044 581 2470 58 0 0 chr2 45846395 45846690 -204841164 + AluY SINE Alu 1 295 -16 451 298 126 41 chr2 45846690 45846846 -204841008 - HAL1 LINE L1 -1926 581 440 2136 110 27 3 chr2 45846846 45847145 -204840709 - AluSx SINE Alu -6 306 1 1701 158 9 38 chr2 45847145 45847462 -204840392 - AluJo SINE Alu -4 308 1 856 184 46 0 chr2 45847489 45847641 -204840213 + FRAM SINE Alu 1 159 -17 572 259 153 31 chr2 45847644 45847969 -204839885 + MLT1G1 LTR MaLR 18 420 -175 3217 164 55 26 chr2 45848024 45848721 -204839133 - L1MC3 LINE L1 -136 7649 6933 901 170 26 70 chr2 45848964 45849075 -204838779 - L1MD3 LINE L1 0 7995 7881 1775 163 14 27 chr2 45849075 45849370 -204838484 - AluJb SINE Alu -21 291 1 901 170 26 70 chr2 45849370 45849529 -204838325 - L1MD3 LINE L1 -114 7881 7737 23 33 0 0 chr2 45849552 45849582 -204838272 + AT_rich Low_complexity Low_complexity 1 30 0 465 333 101 0 chr2 45849616 45849835 -204838019 + MIR SINE MIR 8 248 -14 2232 116 3 0 chr2 45850110 45850411 -204837443 - AluSx SINE Alu -10 302 1 247 319 0 0 chr2 45850484 45850553 -204837301 + MIR SINE MIR 184 252 -10 2254 113 0 3 chr2 45850927 45851229 -204836625 + AluSg SINE Alu 1 301 -9 3973 185 15 21 chr2 45851280 45851847 -204836007 - L1MB8 LINE L1 -2 6176 5614 2063 139 10 0 chr2 45851847 45852141 -204835713 - AluSx SINE Alu -15 297 1 3973 185 15 21 chr2 45852141 45852434 -204835420 - L1MB8 LINE L1 -564 5614 5321 1440 102 10 0 chr2 45852555 45852751 -204835103 - AluSx SINE Alu -114 198 1 5537 178 30 62 chr2 45852963 45853261 -204834593 + Charlie1a DNA MER1_type 4 310 -2451 2245 109 0 0 chr2 45853261 45853565 -204834289 + AluSx SINE Alu 1 304 -8 5537 178 30 62 chr2 45853565 45854177 -204833677 + Charlie1a DNA MER1_type 310 940 -1821 2164 137 0 0 chr2 45854177 45854477 -204833377 - AluSx SINE Alu -12 300 1 5537 178 30 62 chr2 45854477 45854880 -204832974 + Charlie1a DNA MER1_type 940 1354 -1407 180 0 0 0 chr2 45854880 45854900 -204832954 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 2080 133 0 0 chr2 45854908 45855194 -204832660 - AluSx SINE Alu -26 286 1 5537 178 30 62 chr2 45855194 45855255 -204832599 + Charlie1a DNA MER1_type 1284 1345 -110 363 242 111 20 chr2 45855363 45855462 -204832392 + L2 LINE L2 3202 3309 -4 794 220 32 32 chr2 45855712 45855898 -204831956 + MIR SINE MIR 31 216 -46 276 169 13 104 chr2 45856050 45856127 -204831727 - AluJ/FRAM SINE Alu -9 293 224 244 222 69 0 chr2 45856117 45856189 -204831665 - MLT1J2 LTR MaLR -300 150 74 * 747 185 0 0 chr2 45856607 45856726 -204831128 - FLAM_C SINE Alu -24 119 1 387 0 0 0 chr2 45856798 45856841 -204831013 + (CA)n Simple_repeat Simple_repeat 1 43 0 22 56 0 0 chr2 45856900 45856936 -204830918 + AT_rich Low_complexity Low_complexity 1 36 0 710 227 65 77 chr2 45857285 45857436 -204830418 - MIR SINE MIR -13 249 101 2117 114 10 0 chr2 45857436 45857735 -204830119 - AluSx SINE Alu -10 302 1 710 227 65 77 chr2 45857735 45857830 -204830024 - MIR SINE MIR -161 101 6 2311 42 42 3 chr2 45857957 45858241 -204829613 + AluY SINE Alu 1 295 -16 618 143 0 0 chr2 45858460 45858551 -204829303 + AluJ/FLAM SINE Alu 3 93 -219 1234 274 107 28 chr2 45858591 45858839 -204829015 - MLT1J LTR MaLR -8 503 276 2103 103 4 0 chr2 45858839 45859166 -204828688 + AluSx SINE Alu 1 328 0 1234 274 107 28 chr2 45859166 45859376 -204828478 - MLT1J LTR MaLR -235 276 8 443 265 26 17 chr2 45859735 45859852 -204828002 - MIR SINE MIR -75 133 16 230 315 100 75 chr2 45860092 45860333 -204827521 - L2 LINE L2 0 3272 3026 2458 74 0 3 chr2 45860335 45860632 -204827222 - AluSp SINE Alu -17 296 1 1245 184 101 70 chr2 45860752 45861197 -204826657 - MER39 LTR ERV1 -17 690 232 341 231 25 186 chr2 45861326 45861455 -204826399 - MER5A DNA MER1_type -22 167 79 1724 174 3 3 chr2 45861455 45861743 -204826111 - AluJb SINE Alu -24 288 1 341 231 25 186 chr2 45861743 45861812 -204826042 - MER5A DNA MER1_type -110 79 1 2192 98 6 25 chr2 45862081 45862399 -204825455 + AluSp SINE Alu 1 312 -1 618 135 0 0 chr2 45862804 45862893 -204824961 + FRAM SINE Alu 71 159 -17 572 259 153 31 chr2 45862896 45863221 -204824633 + MLT1G1 LTR MaLR 18 420 -175 3217 164 55 26 chr2 45863276 45863973 -204823881 - L1MC3 LINE L1 -136 7649 6933 901 170 26 70 chr2 45864216 45864327 -204823527 - L1MD3 LINE L1 0 7995 7881 1760 160 17 27 chr2 45864327 45864621 -204823233 - AluJb SINE Alu -21 291 1 901 170 26 70 chr2 45864621 45864780 -204823074 - L1MD3 LINE L1 -114 7881 7737 23 33 0 0 chr2 45864803 45864833 -204823021 + AT_rich Low_complexity Low_complexity 1 30 0 465 333 101 0 chr2 45864867 45865086 -204822768 + MIR SINE MIR 8 248 -14 2277 116 0 0 chr2 45865361 45865663 -204822191 - AluSx SINE Alu -10 302 1 247 319 0 0 chr2 45865736 45865805 -204822049 + MIR SINE MIR 184 252 -10 2242 106 0 3 chr2 45866179 45866472 -204821382 + AluSg SINE Alu 1 292 -18 22 0 0 0 chr2 45866506 45866528 -204821326 + AT_rich Low_complexity Low_complexity 1 22 0 689 138 41 24 chr2 45866528 45866651 -204821203 + AluSc SINE Alu 119 243 -66 657 227 43 10 chr2 45866699 45866906 -204820948 + Charlie7 DNA MER1_type 2140 2353 -259 272 190 35 0 chr2 45867126 45867184 -204820670 - Charlie7 DNA MER1_type -382 2230 2171 403 227 80 16 chr2 45867317 45867471 -204820383 - MIR SINE MIR -1 261 57 495 163 51 10 chr2 45868088 45868186 -204819668 - MER5B DNA MER1_type 0 178 77 359 263 73 73 chr2 45870664 45870843 -204817011 - L1ME4a LINE L1 -2 6119 5941 248 303 64 0 chr2 45870865 45870974 -204816880 - L1ME4a LINE L1 -1911 5897 5782 377 213 38 0 chr2 45871758 45871838 -204816016 - MIR SINE MIR -24 238 156 2013 68 0 4 chr2 45871839 45872089 -204815765 + AluY SINE Alu 59 307 -4 306 129 0 0 chr2 45872537 45872599 -204815255 + (TG)n Simple_repeat Simple_repeat 2 63 0 899 92 0 0 chr2 45873125 45873244 -204814610 + AluSg/x SINE Alu 186 304 -6 722 159 23 23 chr2 45873930 45874062 -204813792 - FLAM_C SINE Alu 0 133 2 29 0 0 0 chr2 45874091 45874120 -204813734 + AT_rich Low_complexity Low_complexity 1 29 0 1809 172 0 23 chr2 45874784 45875086 -204812768 - AluJb SINE Alu -17 295 1 2261 94 7 3 chr2 45875092 45875389 -204812465 - AluSg SINE Alu -10 300 3 2225 92 3 0 chr2 45875634 45875916 -204811938 + AluSq SINE Alu 1 283 -30 287 146 11 0 chr2 45876546 45876600 -204811254 + Alu SINE Alu 1 40 -262 251 119 0 0 chr2 45876604 45876646 -204811208 + Alu SINE Alu 252 293 -7 2159 96 14 3 chr2 45876701 45876994 -204810860 + AluY SINE Alu 1 296 -15 386 255 23 30 chr2 45877128 45877337 -204810517 - L1ME4a LINE L1 -239 5882 5683 1924 136 13 25 chr2 45877673 45877989 -204809865 - AluSx SINE Alu 0 312 1 2338 94 0 0 chr2 45878010 45878308 -204809546 - AluY SINE Alu -13 298 1 508 264 98 12 chr2 45878530 45878693 -204809161 + MER5B DNA MER1_type 1 177 -1 234 62 0 0 chr2 45878761 45878793 -204809061 + (T)n Simple_repeat Simple_repeat 1 32 0 270 0 0 0 chr2 45878975 45879005 -204808849 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 207 0 0 0 chr2 45879004 45879027 -204808827 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 * 32 0 0 0 chr2 45880450 45880482 -204807372 + AT_rich Low_complexity Low_complexity 1 32 0 2485 57 3 0 chr2 45880844 45881141 -204806713 + AluSp SINE Alu 1 298 -15 30 69 0 0 chr2 45882656 45882714 -204805140 + AT_rich Low_complexity Low_complexity 1 58 0 386 278 74 0 chr2 45883261 45883369 -204804485 + L2 LINE L2 3190 3305 -8 297 250 129 35 chr2 45883670 45883786 -204804068 - MIR SINE MIR -101 161 35 1773 175 0 3 chr2 45883934 45884219 -204803635 - AluJb SINE Alu -28 284 1 2452 76 0 22 chr2 45884615 45884932 -204802922 + AluY SINE Alu 1 310 -1 2569 62 0 0 chr2 45885261 45885566 -204802288 + AluY SINE Alu 1 305 -6 21 0 0 0 chr2 45885626 45885647 -204802207 + AT_rich Low_complexity Low_complexity 1 21 0 538 308 17 6 chr2 45886102 45886274 -204801580 + MIR SINE MIR 45 218 -44 886 117 17 0 chr2 45886834 45886954 -204800900 + AluSg/x SINE Alu 159 280 -30 1656 173 20 3 chr2 45886966 45887266 -204800588 + L1MB3 LINE L1 5816 6120 -63 1156 153 3 143 chr2 45887380 45887667 -204800187 + AluJb SINE Alu 50 296 -16 2073 114 7 7 chr2 45887958 45888255 -204799599 - AluSq SINE Alu -11 302 6 2968 107 9 36 chr2 45888257 45888706 -204799148 + LTR9 LTR ERV1 87 523 -89 1823 125 35 3 chr2 45888706 45888994 -204798860 + AluSx SINE Alu 1 297 -15 835 210 15 20 chr2 45889014 45889209 -204798645 - L1ME LINE L1 -418 5748 5555 2248 123 69 47 chr2 45889210 45889815 -204798039 + MER51A LTR ERV1 1 547 -87 565 48 58 136 chr2 45890459 45890562 -204797292 + MER51A LTR ERV1 540 634 0 991 221 10 0 chr2 45890562 45890770 -204797084 - L1ME LINE L1 -609 5557 5348 579 208 53 111 chr2 45890771 45891075 -204796779 - MLT1G1 LTR MaLR -222 373 40 639 123 61 0 chr2 45891113 45891227 -204796627 - L1MB2 LINE L1 -3 6168 6048 1871 171 0 10 chr2 45891593 45891897 -204795957 - AluJb SINE Alu -11 301 1 344 248 24 72 chr2 45891898 45892023 -204795831 - L1MC4 LINE L1 -12 8030 7912 236 333 0 0 chr2 45892036 45892105 -204795749 + CT-rich Low_complexity Low_complexity 1 69 0 2290 206 127 70 chr2 45892117 45892233 -204795621 - L1MC4 LINE L1 -143 7899 7791 2100 134 0 0 chr2 45892233 45892525 -204795329 + AluSg SINE Alu 1 292 -18 2290 206 127 70 chr2 45892525 45893120 -204794734 - L1MC4 LINE L1 -251 7791 7132 2283 98 3 3 chr2 45893120 45893425 -204794429 - AluSp SINE Alu -6 307 3 2290 206 127 70 chr2 45893425 45893540 -204794314 - L1MC4 LINE L1 -910 7132 7025 372 254 39 0 chr2 45893595 45893696 -204794158 - L1MC4 LINE L1 -1240 6576 6439 343 255 224 12 chr2 45893927 45894088 -204793766 - L1MEc LINE L1 -4116 2280 2086 2375 82 0 10 chr2 45894106 45894411 -204793443 + AluY SINE Alu 1 302 -9 302 279 111 29 chr2 45894549 45894721 -204793133 - L1ME LINE L1 -945 5201 5016 288 264 42 110 chr2 45895357 45895462 -204792392 + MIR SINE MIR 62 173 -89 2201 88 35 0 chr2 45895462 45895746 -204792108 - AluY SINE Alu -17 294 1 288 264 42 110 chr2 45895746 45895776 -204792078 + MIR SINE MIR 173 203 -59 1220 204 136 87 chr2 45895776 45896238 -204791616 - MER31A LTR ERV1 0 485 1 288 264 42 110 chr2 45896238 45896303 -204791551 + MIR SINE MIR 203 248 -14 234 245 0 0 chr2 45896528 45896577 -204791277 - MER117 DNA MER1_type -134 63 15 1505 175 69 7 chr2 45896577 45896851 -204791003 + AluJo SINE Alu 8 298 -14 530 278 249 12 chr2 45897230 45897619 -204790235 - L2 LINE L2 -256 3057 2572 878 183 43 6 chr2 45897627 45897791 -204790063 + MER20 DNA MER1_type 49 218 -1 207 274 46 137 chr2 45897936 45898023 -204789831 - L2 LINE L2 -194 3078 3013 1997 93 85 0 chr2 45898023 45898293 -204789561 + AluSg SINE Alu 1 293 -17 207 274 46 137 chr2 45898293 45898380 -204789474 - L2 LINE L2 -259 3013 2920 873 84 0 0 chr2 45898495 45898602 -204789252 + AluSp SINE Alu 1 107 -206 582 212 9 0 chr2 45898759 45898872 -204788982 + MSTB1 LTR MaLR 319 432 0 2710 249 89 32 chr2 45898962 45899123 -204788731 + L1ME LINE L1 2865 3015 -3131 1901 143 20 3 chr2 45899123 45899424 -204788430 + AluSx SINE Alu 3 308 -4 2710 249 89 32 chr2 45899424 45899689 -204788165 + L1ME LINE L1 3015 3263 -2883 1692 160 3 52 chr2 45899689 45899763 -204788091 - AluJb SINE Alu -19 293 217 2321 99 0 7 chr2 45899763 45900067 -204787787 - AluSq SINE Alu -9 304 3 1692 160 3 52 chr2 45900067 45900298 -204787556 - AluJb SINE Alu -95 217 3 2710 249 89 32 chr2 45900298 45900924 -204786930 + L1ME LINE L1 3263 3978 -2168 12308 19 0 0 chr2 45900925 45903032 -204784822 + L1PA4 LINE L1 4046 6152 -3 4150 150 29 4 chr2 45903292 45903979 -204783875 - MER50 LTR ERV1 -30 704 1 4369 201 58 73 chr2 45903979 45904353 -204783501 + L1ME LINE L1 4033 4411 -1753 2263 115 0 0 chr2 45904353 45904657 -204783197 + AluSx SINE Alu 1 304 -8 4369 201 58 73 chr2 45904657 45904848 -204783006 + L1ME LINE L1 4411 4603 -1561 1982 123 14 4 chr2 45904848 45905125 -204782729 - AluSx SINE Alu -32 280 1 4369 201 58 73 chr2 45905125 45905474 -204782380 + L1ME LINE L1 4603 4956 -1208 1488 207 3 0 chr2 45905474 45905759 -204782095 - AluJb SINE Alu -26 286 1 4369 201 58 73 chr2 45905759 45906505 -204781349 + L1ME LINE L1 4956 5669 -495 3391 143 5 9 chr2 45907469 45907682 -204780172 + L1M3 LINE L1 5272 5484 -687 189 0 0 0 chr2 45907682 45907703 -204780151 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 3391 143 5 9 chr2 45907703 45908042 -204779812 + L1M3 LINE L1 5484 5822 -349 1750 138 11 11 chr2 45908043 45908304 -204779550 + AluJo SINE Alu 1 261 -51 567 238 54 7 chr2 45908404 45908551 -204779303 - L1ME LINE L1 -594 5570 5417 638 283 113 45 chr2 45908647 45909090 -204778764 + MLT1J2 LTR MaLR 1 446 -4 265 163 0 0 chr2 45909276 45909325 -204778529 - L1ME3A LINE L1 0 6170 6122 212 175 0 0 chr2 45909609 45909649 -204778205 + T-rich Low_complexity Low_complexity 1 40 0 284 279 8 124 chr2 45909731 45909860 -204777994 - MER91B DNA MER1_type 0 190 77 225 329 66 0 chr2 45909868 45909944 -204777910 - MER91B DNA MER1_type -59 131 51 23 0 0 0 chr2 45910046 45910069 -204777785 + AT_rich Low_complexity Low_complexity 1 23 0 437 259 306 52 chr2 45910307 45910883 -204776971 + L3 LINE CR1 435 1156 -421 1507 220 92 41 chr2 45910982 45911525 -204776329 - LTR24B LTR ERV1 0 635 1 288 176 129 47 chr2 45912066 45912151 -204775703 - L1MC4 LINE L1 -1337 6705 6614 343 295 90 39 chr2 45912882 45913315 -204774539 + L1ME LINE L1 4382 4846 -1300 227 207 49 49 chr2 45913588 45913670 -204774184 + L1ME2 LINE L1 6080 6161 -3 236 317 37 12 chr2 45914359 45914441 -204773413 + L1ME LINE L1 5497 5580 -541 433 165 76 82 chr2 45914700 45914818 -204773036 - HsTC2 DNA Tc2 1 1899 1781 2514 63 0 0 chr2 45914818 45915118 -204772736 + AluY SINE Alu 1 300 -11 433 165 76 82 chr2 45915118 45915157 -204772697 - HsTC2 DNA Tc2 -117 1781 1743 1981 147 3 0 chr2 45915233 45915525 -204772329 - AluSx SINE Alu -19 293 1 1004 111 7 0 chr2 45915525 45915660 -204772194 - AluSq/x SINE Alu -176 136 1 509 182 30 0 chr2 45915660 45915759 -204772095 - L1MB2 LINE L1 -345 5826 5725 24 53 0 0 chr2 45915759 45915797 -204772057 + AT_rich Low_complexity Low_complexity 1 38 0 2248 107 0 0 chr2 45915797 45916097 -204771757 - AluSx SINE Alu 0 312 13 2181 99 3 3 chr2 45916113 45916406 -204771448 - AluSx SINE Alu -14 298 6 23 0 0 0 chr2 45917582 45917605 -204770249 + AT_rich Low_complexity Low_complexity 1 23 0 792 141 7 30 chr2 45917763 45917898 -204769956 + FLAM_A SINE Alu 2 133 0 2141 130 3 3 chr2 45918280 45918587 -204769267 - AluSp SINE Alu -6 307 1 2242 66 3 14 chr2 45919342 45919673 -204768181 + AluY SINE Alu 1 328 0 2166 122 0 3 chr2 45920184 45920478 -204767376 - AluSx SINE Alu -19 293 1 796 140 96 6 chr2 45920737 45920894 -204766960 - MER33 DNA MER1_type 0 324 154 828 165 39 0 chr2 45920913 45921040 -204766814 - AluJb SINE Alu -179 133 2 716 181 14 7 chr2 45921041 45921179 -204766675 - MER33 DNA MER1_type -159 165 27 259 333 53 18 chr2 45921196 45921310 -204766544 + L2 LINE L2 3195 3312 -1 1951 169 3 0 chr2 45921414 45921716 -204766138 - AluSx SINE Alu -9 303 1 340 195 16 24 chr2 45922184 45922307 -204765547 + CT-rich Low_complexity Low_complexity 1 122 0 201 111 0 0 chr2 45922307 45922334 -204765520 + (TCCCC)n Simple_repeat Simple_repeat 1 27 0 938 145 6 24 chr2 45922338 45922504 -204765350 - AluJb SINE Alu -13 299 137 197 318 176 38 chr2 45922950 45923058 -204764796 + L2 LINE L2 966 1058 -2256 2039 134 10 0 chr2 45923058 45923350 -204764504 - AluSq SINE Alu -18 295 1 197 318 176 38 chr2 45923350 45923710 -204764144 + L2 LINE L2 1058 1533 -1781 738 180 79 39 chr2 45923710 45923806 -204764048 + MER53 DNA DNA 1 92 -97 1751 142 3 76 chr2 45923806 45924136 -204763718 - AluJb SINE Alu -6 306 1 738 180 79 39 chr2 45924136 45924217 -204763637 + MER53 DNA DNA 92 185 -4 197 318 176 38 chr2 45924217 45924332 -204763522 + L2 LINE L2 1533 1631 -1683 602 292 169 5 chr2 45924558 45924777 -204763077 - MIR SINE MIR -5 257 3 973 291 77 56 chr2 45924996 45925261 -204762593 - L1ME3A LINE L1 -219 5951 5693 2147 122 7 0 chr2 45925261 45925556 -204762298 - AluSg SINE Alu -13 297 1 973 291 77 56 chr2 45925556 45925755 -204762099 - L1ME3A LINE L1 -477 5693 5500 1638 181 3 10 chr2 45925755 45926043 -204761811 - AluJo SINE Alu -26 286 1 973 291 77 56 chr2 45926043 45926290 -204761564 - L1ME3A LINE L1 -670 5500 5256 473 245 151 13 chr2 45926338 45926497 -204761357 - Charlie8 DNA MER1_type -2149 268 88 201 331 157 6 chr2 45926525 45926697 -204761157 - L2 LINE L2 -1158 2156 1959 370 166 52 55 chr2 45927690 45928038 -204759816 + (CTGTG)n Simple_repeat Simple_repeat 1 347 0 346 348 18 0 chr2 45928108 45928220 -204759634 + MIR SINE MIR 99 212 -50 657 394 13 112 chr2 45928224 45928698 -204759156 - L2 LINE L2 -4 3309 2890 684 163 235 0 chr2 45928698 45928851 -204759003 + MER53 DNA DNA 1 189 0 657 394 13 112 chr2 45928851 45928902 -204758952 - L2 LINE L2 -423 2890 2836 1247 147 6 122 chr2 45929161 45929283 -204758571 - L1MB7 LINE L1 -1 6183 6049 2199 109 14 0 chr2 45929283 45929576 -204758278 - AluSx SINE Alu -15 297 1 1247 147 6 122 chr2 45929576 45929773 -204758081 - L1MB7 LINE L1 -135 6049 5901 4420 174 32 31 chr2 45929796 45930068 -204757786 - L1MB7 LINE L1 -569 5609 5339 2048 147 0 6 chr2 45930068 45930382 -204757472 - AluJb SINE Alu 0 312 1 4420 174 32 31 chr2 45930382 45930446 -204757408 - L1MB7 LINE L1 -839 5339 5277 2333 122 0 0 chr2 45930446 45930758 -204757096 - AluSx SINE Alu 0 312 1 4420 174 32 31 chr2 45930758 45930877 -204756977 - L1MB7 LINE L1 -901 5277 5160 2242 103 3 3 chr2 45930877 45931178 -204756676 - AluSq SINE Alu -12 301 1 4420 174 32 31 chr2 45931178 45931935 -204755919 - L1MB7 LINE L1 -1018 5160 4389 456 250 154 11 chr2 45932199 45932387 -204755467 - MIR SINE MIR -44 218 4 352 286 133 0 chr2 45933294 45933399 -204754455 - MIR3 SINE MIR -54 154 36 329 323 217 45 chr2 45933667 45934484 -204753370 - L2 LINE L2 0 3272 2270 2162 111 0 20 chr2 45934484 45934781 -204753073 + AluSg SINE Alu 1 291 -19 329 323 217 45 chr2 45934781 45934862 -204752992 - L2 LINE L2 -1002 2270 2204 582 277 52 45 chr2 45935001 45935201 -204752653 + MIR SINE MIR 21 216 -46 326 275 53 53 chr2 45935278 45935467 -204752387 - L2 LINE L2 -1193 2121 1933 488 267 0 35 chr2 45935472 45935644 -204752210 + AluSx SINE Alu 3 168 -144 1282 105 12 0 chr2 45935983 45936154 -204751700 + AluSg/x SINE Alu 128 300 -12 257 350 33 0 chr2 45936215 45936335 -204751519 - MIR SINE MIR -119 143 20 924 130 0 27 chr2 45936531 45936677 -204751177 - FLAM_C SINE Alu -1 142 1 376 251 27 91 chr2 45937533 45937720 -204750134 - MER69A DNA AcHobo -2 175 1 351 286 27 45 chr2 45937948 45938060 -204749794 + L2 LINE L2 3163 3272 0 2106 127 64 12 chr2 45938361 45938707 -204749147 + THE1B LTR MaLR 1 364 0 1046 165 12 0 chr2 45939367 45939531 -204748323 - AluJo SINE Alu -146 166 1 1154 148 38 4 chr2 45939536 45939792 -204748062 - L1MD1 LINE L1 -374 5868 5575 419 282 134 23 chr2 45939793 45940009 -204747845 + L2 LINE L2 2664 2903 -411 1994 148 3 0 chr2 45940018 45940309 -204747545 - AluSx SINE Alu -18 294 3 2391 91 0 7 chr2 45940665 45940972 -204746882 - AluSq SINE Alu -8 305 1 1679 196 24 10 chr2 45942999 45943290 -204744564 - AluSx SINE Alu -16 296 2 3207 53 0 0 chr2 45943339 45943736 -204744118 - L1PA6 LINE L1 -4 6150 5754 188 281 99 74 chr2 45944287 45944408 -204743446 - L2 LINE L2 -12 3260 3137 2153 110 3 10 chr2 45944797 45945098 -204742756 - AluSg SINE Alu -11 299 1 207 303 145 62 chr2 45945203 45945444 -204742410 + L2 LINE L2 3000 3260 -12 4403 176 119 26 chr2 45945873 45945920 -204741934 - L1MB7 LINE L1 -1 6419 6378 2321 92 7 10 chr2 45945920 45946226 -204741628 - AluSq SINE Alu -8 305 1 4403 176 119 26 chr2 45946226 45947363 -204740491 - L1MB7 LINE L1 -42 6378 4992 789 180 36 42 chr2 45947363 45947530 -204740324 + FRAM SINE Alu 1 166 0 4403 176 119 26 chr2 45947530 45948094 -204739760 - L1MB7 LINE L1 -1428 4992 4482 2302 100 0 7 chr2 45948102 45948401 -204739453 - AluY SINE Alu -14 297 1 2993 169 48 38 chr2 45948425 45948968 -204738886 - L1MB4 LINE L1 -6 6174 5638 1989 145 10 0 chr2 45948968 45949264 -204738590 - AluSx SINE Alu -11 301 3 1897 153 7 20 chr2 45949266 45949561 -204738293 - AluJb SINE Alu -21 291 1 2993 169 48 38 chr2 45949561 45949746 -204738108 - L1MB4 LINE L1 -542 5638 5436 2389 241 86 16 chr2 45949749 45950174 -204737680 - L1MB7 LINE L1 -4734 1650 1256 1781 170 17 3 chr2 45950174 45950463 -204737391 - AluJb SINE Alu -19 293 1 2389 241 86 16 chr2 45950463 45950908 -204736946 - L1MB7 LINE L1 -5128 1256 719 292 301 160 0 chr2 45951144 45951271 -204736583 + MIR SINE MIR 39 183 -62 192 333 87 0 chr2 45951779 45951848 -204736006 - MIR SINE MIR -158 104 30 23 0 0 0 chr2 45952382 45952405 -204735449 + AT_rich Low_complexity Low_complexity 1 23 0 2160 105 0 36 chr2 45954291 45954596 -204733258 - AluSq SINE Alu -4 309 16 1740 206 33 93 chr2 45954696 45954712 -204733142 + L1ME2 LINE L1 5579 5594 -570 4038 68 9 2 chr2 45954712 45955256 -204732598 - L1PA6 LINE L1 0 6154 5607 1740 206 33 93 chr2 45955256 45955339 -204732515 + L1ME2 LINE L1 5594 5680 -484 1842 177 0 3 chr2 45955339 45955627 -204732227 + AluJb SINE Alu 2 288 -24 2267 99 6 13 chr2 45955634 45955947 -204731907 + AluSx SINE Alu 1 311 -1 1740 206 33 93 chr2 45955947 45956451 -204731403 + L1ME2 LINE L1 5686 6154 -10 756 287 43 43 chr2 45956626 45956979 -204730875 + L1MEc LINE L1 52 407 -5989 1978 117 65 7 chr2 45956979 45957270 -204730584 - AluSq SINE Alu -5 308 1 756 287 43 43 chr2 45957270 45957331 -204730523 + L1MEc LINE L1 406 466 -5930 265 218 0 0 chr2 45957343 45957398 -204730456 + Tigger1 DNA MER2_type 1 55 -2363 3718 124 15 15 chr2 45957406 45958018 -204729836 + Tigger1 DNA MER2_type 1807 2418 0 2058 274 64 33 chr2 45958023 45958212 -204729642 + L1MEc LINE L1 484 666 -5730 2570 74 0 0 chr2 45958212 45958522 -204729332 - AluSx SINE Alu -1 311 2 2058 274 64 33 chr2 45958522 45959494 -204728360 + L1MEc LINE L1 666 1681 -4715 2379 102 0 3 chr2 45959542 45959846 -204728008 + AluSg SINE Alu 1 303 -7 1010 250 62 54 chr2 45959861 45960254 -204727600 + L1MEc LINE L1 1886 2286 -4110 938 201 12 0 chr2 45960254 45960423 -204727431 + FAM SINE Alu 2 172 -3 1010 250 62 54 chr2 45960423 45960581 -204727273 + L1MEc LINE L1 2286 2441 -3955 * 2665 199 33 25 chr2 45960576 45960680 -204727174 + L1MB5 LINE L1 4697 4799 -1375 2267 96 7 0 chr2 45960680 45960981 -204726873 + AluSg SINE Alu 1 303 -7 2665 199 33 25 chr2 45960981 45961686 -204726168 + L1MB5 LINE L1 4799 5550 -624 2379 149 43 19 chr2 45961686 45961910 -204725944 - MSTB1 LTR MaLR 0 432 192 1956 119 13 50 chr2 45961910 45962228 -204725626 - AluJo SINE Alu -6 306 1 2379 149 43 19 chr2 45962228 45962425 -204725429 - MSTB1 LTR MaLR -240 192 1 2665 199 33 25 chr2 45962425 45963001 -204724853 + L1MB5 LINE L1 5550 6120 -54 1675 229 10 31 chr2 45963029 45963139 -204724715 + L1MEc LINE L1 2384 2495 -3720 2209 116 0 3 chr2 45963139 45963440 -204724414 + AluSx SINE Alu 1 300 -12 1675 229 10 31 chr2 45963440 45963636 -204724218 + L1MEc LINE L1 2495 2679 -3536 1904 123 50 0 chr2 45963636 45963913 -204723941 + AluSg SINE Alu 1 291 -19 1675 229 10 31 chr2 45963913 45964090 -204723764 + L1MEc LINE L1 2679 2858 -3357 475 217 57 0 chr2 45964093 45964199 -204723655 + MSTB1 LTR MaLR 89 200 -232 2211 111 0 7 chr2 45964199 45964497 -204723357 + AluSx SINE Alu 1 296 -16 2167 110 3 13 chr2 45964498 45964806 -204723048 + AluSg SINE Alu 1 305 -5 381 161 0 54 chr2 45964807 45964900 -204722954 + L1ME LINE L1 5655 5742 -424 414 136 0 15 chr2 45964903 45964969 -204722885 - AluSp SINE Alu -132 181 117 266 164 18 18 chr2 45965075 45965130 -204722724 - Alu SINE Alu -245 55 1 1460 155 65 81 chr2 45965254 45965563 -204722291 + AluJo SINE Alu 1 304 -8 364 358 63 10 chr2 45966253 45966460 -204721394 + L1MEd LINE L1 964 1181 -4938 259 255 130 71 chr2 45966497 45966681 -204721173 + HAL1 LINE L1 1409 1603 -904 609 153 227 45 chr2 45967002 45967068 -204720786 - MER3 DNA MER1_type -1 208 155 1960 146 17 7 chr2 45967068 45967362 -204720492 + AluJb SINE Alu 2 298 -14 609 153 227 45 chr2 45967362 45967471 -204720383 - MER3 DNA MER1_type -54 155 1 409 319 160 32 chr2 45967869 45967982 -204719872 + L1MC4a LINE L1 5580 5677 -2131 1883 132 14 10 chr2 45967982 45968278 -204719576 - AluSx SINE Alu -15 297 1 409 319 160 32 chr2 45968278 45968540 -204719314 + L1MC4a LINE L1 5677 6003 -1805 245 282 14 0 chr2 45968873 45968944 -204718910 - MIR SINE MIR 0 262 191 253 265 147 10 chr2 45969173 45969275 -204718579 + L1ME LINE L1 5556 5671 -450 325 283 132 64 chr2 45971875 45972140 -204715714 + HAL1 LINE L1 59 341 -2166 180 0 0 0 chr2 45973645 45973665 -204714189 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3207 157 67 19 chr2 45973665 45974308 -204713546 + L1MB2 LINE L1 5496 6169 -2 1890 158 0 34 chr2 45974482 45974804 -204713050 + AluJb SINE Alu 1 311 -1 418 331 26 73 chr2 45974926 45975228 -204712626 + LTR67 LTR ERVL 7 294 -263 261 195 130 0 chr2 45975336 45975413 -204712441 + LTR67 LTR ERVL 471 557 0 808 128 8 0 chr2 45976351 45976468 -204711386 - AluJb SINE Alu -190 122 5 2033 115 17 7 chr2 45976717 45977013 -204710841 - AluSx SINE Alu -13 299 1 1931 105 0 8 chr2 45977106 45977373 -204710481 - AluSg SINE Alu -2 308 44 1203 232 70 7 chr2 45977382 45977666 -204710188 - AluJo SINE Alu 0 302 1 467 247 26 104 chr2 45977914 45978095 -204709759 - L1MC4 LINE L1 -60 7982 7821 2321 94 3 0 chr2 45978095 45978393 -204709461 + AluSp SINE Alu 1 299 -14 467 247 26 104 chr2 45978393 45978442 -204709412 - L1MC4 LINE L1 -221 7821 7770 27 0 0 0 chr2 45978446 45978473 -204709381 + AT_rich Low_complexity Low_complexity 1 27 0 313 324 64 23 chr2 45978618 45978791 -204709063 - L1MC5 LINE L1 -444 7517 7338 263 218 72 35 chr2 45978791 45978927 -204708927 - L1MC4 LINE L1 -391 7497 7282 29 0 0 0 chr2 45981088 45981117 -204706737 + AT_rich Low_complexity Low_complexity 1 29 0 2493 82 0 0 chr2 45983432 45983738 -204704116 + AluSc SINE Alu 1 306 -3 2234 194 103 17 chr2 45983852 45984503 -204703351 - Charlie1 DNA MER1_type -2 2759 2053 2362 97 3 0 chr2 45984520 45984818 -204703036 + AluSp SINE Alu 6 304 -9 1347 184 90 22 chr2 45984826 45985093 -204702761 + AluJo SINE Alu 1 285 -27 2179 93 13 26 chr2 45985307 45985618 -204702236 + AluSx SINE Alu 1 307 -5 2238 112 0 7 chr2 45987088 45987393 -204700461 - AluSq SINE Alu -10 303 1 25 65 0 0 chr2 45987479 45987525 -204700329 + AT_rich Low_complexity Low_complexity 1 46 0 2252 106 0 0 chr2 45987611 45987912 -204699942 + AluSx SINE Alu 2 302 -10 217 239 22 0 chr2 45988153 45988199 -204699655 + GA-rich Low_complexity Low_complexity 4 50 0 1159 160 5 5 chr2 45988199 45988393 -204699461 + AluJo SINE Alu 118 311 -1 347 247 105 0 chr2 45988421 45988638 -204699216 - L1M LINE L1 -736 5428 5188 24 0 0 0 chr2 45988726 45988750 -204699104 + AT_rich Low_complexity Low_complexity 1 24 0 380 213 106 0 chr2 45988758 45988852 -204699002 - U13 snRNA snRNA 0 104 1 228 35 0 0 chr2 45989069 45989098 -204698756 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 895 163 25 6 chr2 45989202 45989362 -204698492 - FRAM SINE Alu -13 163 1 569 131 98 201 chr2 45989570 45989844 -204698010 - MER96B DNA MER1_type? -166 251 6 2283 113 0 7 chr2 45990188 45990497 -204697357 - AluSq SINE Alu -6 307 1 557 201 75 50 chr2 45990818 45990977 -204696877 + MIR SINE MIR 8 170 -92 677 199 174 25 chr2 45991047 45991248 -204696606 - MIR SINE MIR -14 248 18 1906 125 35 3 chr2 45991343 45991630 -204696224 - AluSx SINE Alu -14 298 3 2421 90 0 0 chr2 45991645 45991955 -204695899 - AluSg SINE Alu 0 310 1 265 189 68 14 chr2 45992539 45992613 -204695241 + MER58 DNA MER1_type 19 96 -119 315 161 16 16 chr2 45992652 45992714 -204695140 + MER58 DNA MER1_type 2359 2420 0 264 289 74 118 chr2 45992730 45993121 -204694733 - L2 LINE L2 -4 3268 2895 2125 131 0 6 chr2 45993131 45993443 -204694411 + AluSx SINE Alu 1 310 -2 1812 109 18 42 chr2 45993455 45993561 -204694293 + AluSx SINE Alu 36 143 -169 1999 97 68 7 chr2 45993561 45993840 -204694014 + AluSx SINE Alu 6 301 -11 1812 109 18 42 chr2 45993840 45994016 -204693838 + AluSx SINE Alu 143 311 -1 23 0 0 0 chr2 45996154 45996177 -204691677 + AT_rich Low_complexity Low_complexity 1 23 0 434 322 33 93 chr2 45996425 45996499 -204691355 + L2 LINE L2 2824 2901 -371 1883 186 0 0 chr2 45996499 45996795 -204691059 - AluJb SINE Alu -16 296 1 434 322 33 93 chr2 45996795 45996810 -204691044 + L2 LINE L2 2901 2915 -357 1833 97 32 4 chr2 45996810 45997058 -204690796 - AluSg SINE Alu -55 255 1 434 322 33 93 chr2 45997058 45997365 -204690489 + L2 LINE L2 2915 3197 -75 2612 46 0 0 chr2 45997494 45997798 -204690056 - AluY SINE Alu -7 304 1 193 333 42 0 chr2 45997924 45997996 -204689858 + L2 LINE L2 3197 3271 -1 21 0 0 0 chr2 45999171 45999192 -204688662 + AT_rich Low_complexity Low_complexity 1 21 0 1739 108 6 108 chr2 46000099 46000415 -204687439 - AluSq SINE Alu -14 299 16 5605 100 41 21 chr2 46001038 46002248 -204685606 + L1PA15 LINE L1 4924 6165 0 31 0 0 0 chr2 46002255 46002286 -204685568 + AT_rich Low_complexity Low_complexity 1 31 0 531 226 30 30 chr2 46004336 46004469 -204683385 + MLT1H LTR MaLR 379 511 -38 313 342 0 17 chr2 46005178 46005295 -204682559 - L1MC4 LINE L1 -72 7970 7856 368 361 50 30 chr2 46005731 46005933 -204681921 - L1ME LINE L1 -365 5756 5551 2292 113 0 0 chr2 46006197 46006497 -204681357 + AluSx SINE Alu 1 300 -12 33 25 0 0 chr2 46007226 46007266 -204680588 + AT_rich Low_complexity Low_complexity 1 40 0 253 164 75 30 chr2 46008538 46008605 -204679249 - HsTC2 DNA Tc2 -609 1289 1220 * 464 236 27 0 chr2 46008588 46008698 -204679156 - HsTC2 DNA Tc2 -1772 126 14 266 286 0 0 chr2 46009802 46009865 -204677989 + L2 LINE L2 3194 3256 -16 2077 125 14 0 chr2 46010904 46011199 -204676655 - AluSx SINE Alu -13 299 1 842 138 0 0 chr2 46011410 46011526 -204676328 + FLAM_C SINE Alu 2 117 -26 30 27 0 0 chr2 46012471 46012508 -204675346 + AT_rich Low_complexity Low_complexity 1 37 0 1887 134 17 17 chr2 46012598 46012897 -204674957 + AluJo SINE Alu 1 299 -13 811 106 0 0 chr2 46013613 46013717 -204674137 - FLAM_A SINE Alu -17 125 22 810 219 47 9 chr2 46014805 46015020 -204672834 + L1MC4 LINE L1 6830 7052 -990 560 79 0 0 chr2 46015232 46015308 -204672546 + Alu SINE Alu 1 76 -233 586 286 68 46 chr2 46015364 46015993 -204671861 + L1M4 LINE L1 3350 3992 -2154 220 192 0 39 chr2 46016062 46016114 -204671740 - L2 LINE L2 -1086 2228 2179 3665 229 77 70 chr2 46016218 46016536 -204671318 + L2 LINE L2 1802 2116 -1197 1668 89 4 52 chr2 46016536 46016784 -204671070 - AluSq SINE Alu -76 237 2 3665 229 77 70 chr2 46016784 46017811 -204670043 + L2 LINE L2 2116 3155 -158 1476 169 37 30 chr2 46017811 46018107 -204669747 - AluJb SINE Alu -14 298 1 3665 229 77 70 chr2 46018107 46018267 -204669587 + L2 LINE L2 3155 3312 -1 523 293 102 9 chr2 46018287 46018512 -204669342 + L1M4 LINE L1 5152 5397 -749 826 158 0 16 chr2 46018514 46018641 -204669213 + FLAM_C SINE Alu 1 125 -18 228 120 160 0 chr2 46018641 46018691 -204669163 - Tigger4(Zombi) DNA MER2_type -2673 58 1 891 236 17 40 chr2 46018819 46018851 -204669003 + L1M4 LINE L1 4716 4747 -1399 2291 102 0 13 chr2 46018851 46019164 -204668690 + AluSx SINE Alu 1 309 -3 891 236 17 40 chr2 46019164 46019428 -204668426 + L1M4 LINE L1 4747 5005 -1141 1468 191 37 20 chr2 46019428 46019727 -204668127 + AluJb SINE Alu 1 304 -8 275 328 115 8 chr2 46019833 46019955 -204667899 - L2 LINE L2 0 3272 3138 286 168 30 89 chr2 46019993 46020094 -204667760 + L2 LINE L2 2219 2313 -1001 2038 121 0 13 chr2 46020128 46020426 -204667428 - AluSx SINE Alu -18 294 1 332 204 175 0 chr2 46020571 46020674 -204667180 - MER46C DNA MER2_type -126 212 92 1876 155 3 7 chr2 46020815 46021106 -204666748 + AluSx SINE Alu 1 290 -22 219 289 289 0 chr2 46021106 46021220 -204666634 + L2 LINE L2 2571 2717 -597 227 152 22 0 chr2 46021294 46021340 -204666514 + (TA)n Simple_repeat Simple_repeat 1 47 0 388 266 13 84 chr2 46021767 46021803 -204666051 - MER5B DNA MER1_type -29 149 112 2091 95 7 14 chr2 46021803 46022110 -204665744 + AluSq SINE Alu 1 305 0 388 266 13 84 chr2 46022110 46022226 -204665628 - MER5B DNA MER1_type -66 112 7 1524 186 17 17 chr2 46022350 46022641 -204665213 - AluJb SINE Alu -18 294 4 690 163 15 22 chr2 46023686 46023875 -204663979 + L1MB4 LINE L1 5740 6169 -11 29 28 0 0 chr2 46023933 46023969 -204663885 + AT_rich Low_complexity Low_complexity 1 36 0 683 204 8 0 chr2 46024096 46024228 -204663626 + MER94 DNA DNA 1 133 -1 1894 95 12 0 chr2 46024606 46024858 -204662996 - AluSx SINE Alu -10 302 48 23 0 0 0 chr2 46024971 46024994 -204662860 + AT_rich Low_complexity Low_complexity 1 23 0 324 347 96 10 chr2 46025781 46025980 -204661874 - MIR SINE MIR -15 247 32 552 192 170 45 chr2 46026140 46026342 -204661512 + MIR SINE MIR 34 262 0 2183 92 0 10 chr2 46028922 46029216 -204658638 - AluSp SINE Alu -21 292 2 2063 136 3 3 chr2 46029223 46029524 -204658330 - AluSx SINE Alu -8 304 4 730 168 38 23 chr2 46029553 46029684 -204658170 - FLAM_A SINE Alu 0 133 1 309 378 81 24 chr2 46029826 46030122 -204657732 + L2 LINE L2 2953 3265 -7 246 194 0 32 chr2 46030458 46030520 -204657334 - MLT1H LTR MaLR -392 157 98 438 288 167 19 chr2 46031035 46031299 -204656555 - MLT1K LTR MaLR -219 369 67 378 306 69 0 chr2 46032084 46032244 -204655610 + MIR SINE MIR 79 249 -13 1872 164 0 11 chr2 46032250 46032573 -204655281 - AluSx SINE Alu 0 320 1 265 269 0 21 chr2 46032693 46032786 -204655068 - HAL1 LINE L1 -1735 772 682 1907 132 19 47 chr2 46032811 46033175 -204654679 + MER46B DNA MER2_type 3 231 -5 280 267 95 19 chr2 46033364 46033469 -204654385 - HAL1 LINE L1 -2081 426 314 25 0 0 0 chr2 46034307 46034332 -204653522 + AT_rich Low_complexity Low_complexity 1 25 0 1525 168 14 61 chr2 46034432 46034729 -204653125 - AluSx SINE Alu -26 286 4 233 233 133 0 chr2 46034979 46035069 -204652785 - LTR67 LTR ERVL -29 528 427 229 374 11 0 chr2 46035443 46035534 -204652320 - LTR67 LTR ERVL -367 190 99 493 288 71 0 chr2 46035609 46035779 -204652075 + MIR SINE MIR 8 189 -73 959 251 87 9 chr2 46035779 46036206 -204651648 - L1M4 LINE L1 -2549 3597 3138 391 235 33 49 chr2 46036277 46036360 -204651494 - L1M4 LINE L1 -3143 3003 2920 1783 188 0 13 chr2 46036360 46036529 -204651325 - AluJo SINE Alu -13 299 134 2193 105 0 16 chr2 46036529 46036834 -204651020 - AluSq SINE Alu -13 300 1 1783 188 0 13 chr2 46036834 46036967 -204650887 - AluJo SINE Alu -178 134 1 391 235 33 49 chr2 46036967 46037066 -204650788 - L1M4 LINE L1 -3226 2920 2824 736 236 103 11 chr2 46037136 46037484 -204650370 - L1MC5 LINE L1 -60 7901 7522 1410 179 75 11 chr2 46037751 46038030 -204649824 + AluJo SINE Alu 1 297 -15 312 347 58 0 chr2 46038053 46038174 -204649680 - L1ME LINE L1 -5940 130 3 1921 164 23 0 chr2 46039389 46039688 -204648166 + AluJb SINE Alu 1 306 -6 288 268 12 24 chr2 46039847 46039929 -204647925 - MIR SINE MIR -24 238 158 220 354 101 35 chr2 46040045 46040243 -204647611 + L3b LINE CR1 1350 1560 -23 1584 150 4 8 chr2 46040423 46040669 -204647185 + AluJo SINE Alu 32 276 -36 229 163 0 41 chr2 46040674 46040723 -204647131 - Alu SINE Alu -136 167 121 24 53 0 0 chr2 46040911 46040949 -204646905 + AT_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr2 46040984 46041009 -204646845 + AT_rich Low_complexity Low_complexity 1 25 0 1934 133 7 13 chr2 46041330 46041631 -204646223 - AluSx SINE Alu -13 299 1 389 246 41 25 chr2 46041675 46041797 -204646057 + AluJb SINE Alu 1 124 -178 2418 77 3 66 chr2 46041918 46042103 -204645751 - L1PB2 LINE L1 -4 6147 5952 2023 139 0 0 chr2 46042103 46042397 -204645457 - AluSx SINE Alu -18 294 1 2418 77 3 66 chr2 46042397 46042552 -204645302 - L1PB2 LINE L1 -199 5952 5831 2093 137 0 0 chr2 46042552 46042845 -204645009 - AluSx SINE Alu -19 293 1 2418 77 3 66 chr2 46042845 46042882 -204644972 - L1PB2 LINE L1 -320 5831 5793 422 257 59 55 chr2 46042982 46043184 -204644670 + L2 LINE L2 2931 3133 -180 626 278 86 5 chr2 46043487 46043674 -204644180 + MIR SINE MIR 61 262 0 25 31 0 0 chr2 46044023 46044055 -204643799 + AT_rich Low_complexity Low_complexity 1 32 0 231 184 20 0 chr2 46044563 46044612 -204643242 + L2 LINE L2 3264 3313 0 2011 158 0 3 chr2 46045075 46045379 -204642475 + AluJb SINE Alu 1 303 -9 455 259 27 0 chr2 46045871 46045983 -204641871 + L2 LINE L2 3193 3307 -6 186 354 72 26 chr2 46046809 46047004 -204640850 - L2 LINE L2 -853 2461 2258 198 0 0 0 chr2 46047237 46047259 -204640595 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 21 71 0 0 chr2 46047915 46047957 -204639897 + AT_rich Low_complexity Low_complexity 1 42 0 2333 109 0 0 chr2 46047991 46048293 -204639561 - AluSx SINE Alu -10 302 1 367 250 70 0 chr2 46050959 46051059 -204636795 - MIR SINE MIR -26 236 130 680 118 56 169 chr2 46051059 46051181 -204636673 - AluJo SINE Alu -68 244 147 2419 50 0 30 chr2 46051181 46051481 -204636373 + AluY SINE Alu 1 291 -20 680 118 56 169 chr2 46051481 46051536 -204636318 - AluJo SINE Alu -165 147 87 397 338 5 56 chr2 46051854 46051965 -204635889 + MIR SINE MIR 2 98 -164 1946 122 61 25 chr2 46051965 46052327 -204635527 + THE1C LTR MaLR 1 375 0 397 338 5 56 chr2 46052327 46052431 -204635423 + MIR SINE MIR 98 206 -56 641 263 32 77 chr2 46052459 46052566 -204635288 - MIR SINE MIR -11 251 141 2112 103 0 14 chr2 46052566 46052856 -204634998 - AluSc SINE Alu -20 289 4 641 263 32 77 chr2 46052856 46052995 -204634859 - MIR SINE MIR -121 141 16 656 218 27 27 chr2 46053011 46053158 -204634696 + FRAM SINE Alu 23 169 -7 584 101 20 30 chr2 46053166 46053265 -204634589 - L1MB3 LINE L1 -7 6176 6079 2101 120 7 10 chr2 46053276 46053585 -204634269 - AluSc SINE Alu -1 308 1 483 305 113 0 chr2 46054079 46054282 -204633572 - MLT1G-int LTR MaLR -830 541 316 234 177 81 16 chr2 46054312 46054374 -204633480 - MLT1G-int LTR MaLR -1648 87 22 925 255 173 23 chr2 46054394 46054573 -204633281 - MLT1G LTR MaLR 0 590 439 1679 133 20 33 chr2 46054573 46054873 -204632981 - AluSq SINE Alu -14 299 4 925 255 173 23 chr2 46054873 46055050 -204632804 - MLT1G LTR MaLR -151 439 149 216 0 0 0 chr2 46055052 46055076 -204632778 + (T)n Simple_repeat Simple_repeat 1 24 0 929 169 6 45 chr2 46055192 46055369 -204632485 + AluSc SINE Alu 127 296 -13 1888 168 7 0 chr2 46055938 46056236 -204631618 - AluJo SINE Alu -10 302 3 2387 64 0 0 chr2 46057403 46057715 -204630139 - AluSc SINE Alu 0 312 1 3932 168 28 75 chr2 46057835 46058964 -204628890 - L1MB7 LINE L1 -25 6159 5093 604 244 133 11 chr2 46060332 46060512 -204627342 + MIR SINE MIR 15 216 -46 2456 84 0 3 chr2 46062130 46062439 -204625415 - AluSg SINE Alu -2 308 1 273 287 74 70 chr2 46062696 46062784 -204625070 + MIR SINE MIR 12 98 -164 2219 112 7 0 chr2 46062784 46063088 -204624766 - AluSx SINE Alu -6 306 1 273 287 74 70 chr2 46063088 46063243 -204624611 + MIR SINE MIR 98 256 -6 368 242 183 39 chr2 46065300 46065453 -204622401 - L2 LINE L2 -5 3308 3134 2142 127 0 10 chr2 46065455 46065762 -204622092 - AluSx SINE Alu -5 307 4 932 191 102 19 chr2 46066023 46066238 -204621616 - MIR SINE MIR -19 243 11 425 311 25 0 chr2 46066290 46066409 -204621445 + L2 LINE L2 3151 3272 0 319 266 78 78 chr2 46066904 46067328 -204620526 - L1ME4a LINE L1 -3 6118 5695 795 181 44 40 chr2 46067524 46067750 -204620104 - L1MC5 LINE L1 -435 7526 7300 260 140 60 0 chr2 46067900 46067950 -204619904 - MLT1G1 LTR MaLR 0 595 543 463 294 53 115 chr2 46067951 46068369 -204619485 + L1MA5 LINE L1 414 805 -5498 4371 231 59 31 chr2 46068513 46070057 -204617797 + L1MA5 LINE L1 799 2326 -4056 1778 128 8 0 chr2 46070057 46070306 -204617548 + AluSx SINE Alu 1 251 -61 4371 231 59 31 chr2 46070306 46071708 -204616146 + L1MA5 LINE L1 2326 3687 -2695 1730 149 52 21 chr2 46071710 46071999 -204615855 + AluJb SINE Alu 1 298 -14 2228 95 0 23 chr2 46072001 46072306 -204615548 + AluSq SINE Alu 11 308 -5 3129 167 21 6 chr2 46072328 46073376 -204614478 + L1MA5 LINE L1 4952 6015 -521 1824 183 3 6 chr2 46073378 46073690 -204614164 + AluJo SINE Alu 1 311 -1 1049 115 47 3 chr2 46073690 46073884 -204613970 + L1MA5 LINE L1 6131 6530 -2 818 112 22 0 chr2 46073884 46074014 -204613840 + L1MA5 LINE L1 6398 6534 -2 326 300 88 93 chr2 46074143 46074370 -204613484 - HAL1 LINE L1 -1149 1358 1132 498 195 44 0 chr2 46074370 46074483 -204613371 - L1MB4 LINE L1 0 6180 6063 326 300 88 93 chr2 46074483 46074632 -204613222 - HAL1 LINE L1 -1375 1132 984 415 296 83 26 chr2 46075426 46075690 -204612164 - L1MB4 LINE L1 -2275 5533 5255 2262 81 20 0 chr2 46075736 46076032 -204611822 - AluSx SINE Alu -10 302 1 22 35 0 0 chr2 46076067 46076096 -204611758 + AT_rich Low_complexity Low_complexity 1 29 0 1446 156 4 13 chr2 46076114 46076351 -204611503 + AluJb SINE Alu 58 292 -20 240 286 151 52 chr2 46076363 46076469 -204611385 + MIR SINE MIR 19 144 -118 1478 158 103 0 chr2 46076469 46076722 -204611132 - AluSx SINE Alu -33 279 1 240 286 151 52 chr2 46076722 46076769 -204611085 + MIR SINE MIR 144 185 -77 1538 99 0 14 chr2 46076819 46077030 -204610824 - AluY SINE Alu -19 292 85 206 247 182 0 chr2 46077100 46077177 -204610677 + MIR SINE MIR 172 262 0 202 296 183 0 chr2 46077307 46077422 -204610432 - L2 LINE L2 -1 3271 3136 22 35 0 0 chr2 46078000 46078029 -204609825 + AT_rich Low_complexity Low_complexity 1 29 0 2422 93 0 3 chr2 46078905 46079218 -204608636 + AluSx SINE Alu 1 312 0 26 50 0 0 chr2 46079887 46079927 -204607927 + AT_rich Low_complexity Low_complexity 1 40 0 2203 98 3 3 chr2 46080061 46080356 -204607498 - AluSc SINE Alu -14 295 1 493 263 141 0 chr2 46081518 46081674 -204606180 + MIR SINE MIR 85 262 0 23 33 0 0 chr2 46081793 46081823 -204606031 + AT_rich Low_complexity Low_complexity 1 30 0 2544 45 7 0 chr2 46083431 46083739 -204604115 - AluY SINE Alu 0 311 2 231 190 17 17 chr2 46085593 46085651 -204602203 + (TA)n Simple_repeat Simple_repeat 2 59 0 200 167 0 0 chr2 46085741 46085771 -204602083 + (TG)n Simple_repeat Simple_repeat 1 30 0 3064 234 48 33 chr2 46088930 46090198 -204597656 + L1ME3A LINE L1 4606 5853 -317 1992 145 48 0 chr2 46090198 46090529 -204597325 - MER7A DNA MER2_type 0 346 2 3064 234 48 33 chr2 46090529 46090704 -204597150 + L1ME3A LINE L1 5853 6071 -99 2230 98 0 7 chr2 46090704 46090999 -204596855 - AluSx SINE Alu -10 302 10 3064 234 48 33 chr2 46090999 46091096 -204596758 + L1ME3A LINE L1 6071 6165 -5 194 0 39 0 chr2 46091127 46091153 -204596701 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 298 278 137 116 chr2 46091430 46091671 -204596183 + L2 LINE L2 3014 3259 -13 2236 91 0 24 chr2 46092958 46093256 -204594598 + AluSp SINE Alu 1 291 -22 1135 153 6 0 chr2 46093285 46093461 -204594393 + AluJb SINE Alu 125 301 -11 315 0 0 0 chr2 46093585 46093620 -204594234 + (TG)n Simple_repeat Simple_repeat 2 36 0 1433 203 4 18 chr2 46093625 46093901 -204593953 - AluJo SINE Alu -30 282 11 2345 103 0 0 chr2 46093985 46094287 -204593567 - AluSx SINE Alu -10 302 1 740 182 0 0 chr2 46094596 46094717 -204593137 + L1PA16 LINE L1 6023 6143 -23 225 65 0 0 chr2 46094735 46094766 -204593088 + (CA)n Simple_repeat Simple_repeat 2 32 0 2476 81 3 0 chr2 46095007 46095316 -204592538 - AluSp SINE Alu -3 310 1 1850 162 7 10 chr2 46095609 46095912 -204591942 + AluJb SINE Alu 1 302 -10 288 250 13 0 chr2 46096072 46096148 -204591706 + MER97b DNA MER1_type? 103 179 -874 24 32 0 0 chr2 46097077 46097108 -204590746 + AT_rich Low_complexity Low_complexity 1 31 0 31 44 0 0 chr2 46097201 46097246 -204590608 + AT_rich Low_complexity Low_complexity 1 45 0 2298 105 0 10 chr2 46097631 46097936 -204589918 - AluSg SINE Alu -8 302 1 297 258 197 66 chr2 46099535 46099748 -204588106 + L2 LINE L2 3029 3269 -3 1670 172 3 17 chr2 46099889 46100185 -204587669 - AluJo SINE Alu -20 292 1 312 27 0 0 chr2 46102451 46102488 -204585366 + (GA)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr2 46102893 46102921 -204584933 + AT_rich Low_complexity Low_complexity 1 28 0 2166 125 17 0 chr2 46105428 46105723 -204582131 - AluSx SINE Alu -12 300 1 548 111 0 0 chr2 46106281 46106362 -204581492 + LTR29 LTR ERV1 476 556 -66 754 142 37 45 chr2 46106477 46106611 -204581243 + FRAM SINE Alu 1 132 -44 1459 114 9 9 chr2 46106765 46106976 -204580878 + AluSq SINE Alu 86 296 -17 864 189 27 32 chr2 46108470 46108655 -204579199 - MLT1A2 LTR MaLR -2 372 189 293 183 0 14 chr2 46108679 46108750 -204579104 + GA-rich Low_complexity Low_complexity 1 70 0 1039 154 44 11 chr2 46108760 46108942 -204578912 - MLT1A2 LTR MaLR -186 188 1 194 279 0 0 chr2 46109222 46109265 -204578589 - L2 LINE L2 0 3272 3230 1067 168 10 0 chr2 46109343 46109540 -204578314 - L1MC/D LINE L1 -839 5520 5322 2363 170 44 8 chr2 46109540 46109964 -204577890 - MSTB1 LTR MaLR 0 432 1 1266 215 48 13 chr2 46109964 46110359 -204577495 - L1MC/D LINE L1 -820 5326 4918 809 134 64 76 chr2 46110363 46110520 -204577334 - Tigger2a DNA MER2_type -279 155 1 1669 142 49 8 chr2 46110575 46110894 -204576960 - AluJb SINE Alu 0 334 5 311 206 33 22 chr2 46112377 46112469 -204575385 - MIR SINE MIR -43 219 127 208 257 100 0 chr2 46112628 46112698 -204575156 - MER5C DNA MER1_type -247 77 1 267 289 22 0 chr2 46112706 46112796 -204575058 - MER5C DNA MER1_type 0 324 233 289 268 134 0 chr2 46112812 46112909 -204574945 - MER5C DNA MER1_type -214 110 1 2264 108 0 0 chr2 46113555 46113850 -204574004 + AluSx SINE Alu 1 295 -17 192 222 222 37 chr2 46113881 46113962 -204573892 - MIR SINE MIR -131 131 36 1641 148 19 4 chr2 46114047 46114311 -204573543 - AluJb SINE Alu -3 309 42 1231 199 170 44 chr2 46114342 46114748 -204573106 + MSTB2 LTR MaLR 1 457 0 2572 211 22 33 chr2 46114749 46115389 -204572465 - L1MC4a LINE L1 -57 7751 7119 2401 79 3 66 chr2 46115404 46115589 -204572265 - L1PB2 LINE L1 -4 6147 5952 2043 137 0 0 chr2 46115589 46115882 -204571972 - AluSx SINE Alu -19 293 1 2401 79 3 66 chr2 46115882 46116037 -204571817 - L1PB2 LINE L1 -199 5952 5831 2107 133 0 0 chr2 46116037 46116330 -204571524 - AluSx SINE Alu -19 293 1 2401 79 3 66 chr2 46116330 46116367 -204571487 - L1PB2 LINE L1 -320 5831 5793 422 257 59 55 chr2 46116467 46116669 -204571185 + L2 LINE L2 2931 3133 -180 626 278 86 5 chr2 46116972 46117159 -204570695 + MIR SINE MIR 61 262 0 25 31 0 0 chr2 46117508 46117540 -204570314 + AT_rich Low_complexity Low_complexity 1 32 0 231 184 20 0 chr2 46118048 46118097 -204569757 + L2 LINE L2 3264 3313 0 2011 158 0 3 chr2 46118560 46118864 -204568990 + AluJb SINE Alu 1 303 -9 455 259 27 0 chr2 46119361 46119473 -204568381 + L2 LINE L2 3193 3307 -6 186 354 72 26 chr2 46120299 46120494 -204567360 - L2 LINE L2 -853 2461 2258 198 0 0 0 chr2 46120727 46120749 -204567105 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 21 71 0 0 chr2 46121405 46121447 -204566407 + AT_rich Low_complexity Low_complexity 1 42 0 2306 113 0 0 chr2 46121481 46121783 -204566071 - AluSx SINE Alu -10 302 1 367 250 70 0 chr2 46124449 46124549 -204563305 - MIR SINE MIR -26 236 130 763 135 32 248 chr2 46124549 46124671 -204563183 - AluJo SINE Alu -68 244 228 2425 50 0 27 chr2 46124671 46124970 -204562884 + AluY SINE Alu 1 291 -20 763 135 32 248 chr2 46124970 46125158 -204562696 - AluJo SINE Alu -84 228 1 397 338 5 56 chr2 46125315 46125426 -204562428 + MIR SINE MIR 2 98 -164 1946 122 61 25 chr2 46125426 46125788 -204562066 + THE1C LTR MaLR 1 375 0 397 338 5 56 chr2 46125788 46125892 -204561962 + MIR SINE MIR 98 206 -56 641 263 32 77 chr2 46125920 46126027 -204561827 - MIR SINE MIR -11 251 141 2098 107 0 14 chr2 46126027 46126317 -204561537 - AluSc SINE Alu -20 289 4 641 263 32 77 chr2 46126317 46126456 -204561398 - MIR SINE MIR -121 141 16 656 218 27 27 chr2 46126472 46126619 -204561235 + FRAM SINE Alu 23 169 -7 584 101 20 30 chr2 46126627 46126726 -204561128 - L1MB3 LINE L1 -7 6176 6079 2092 120 7 10 chr2 46126737 46127046 -204560808 - AluSc SINE Alu -1 308 1 483 305 113 0 chr2 46127540 46127743 -204560111 - MLT1G-int LTR MaLR -830 541 316 234 177 81 16 chr2 46127773 46127835 -204560019 - MLT1G-int LTR MaLR -1648 87 22 1529 236 105 36 chr2 46127855 46128034 -204559820 - MLT1G LTR MaLR 0 590 425 2117 124 0 7 chr2 46128034 46128333 -204559521 - AluSx SINE Alu -12 300 4 1529 236 105 36 chr2 46128333 46128512 -204559342 - MLT1G LTR MaLR -165 425 260 2481 73 3 0 chr2 46128512 46128813 -204559041 - AluSx SINE Alu -5 307 6 1529 236 105 36 chr2 46128813 46129005 -204558849 - MLT1G LTR MaLR -330 260 1 314 162 26 34 chr2 46129201 46129318 -204558536 + CT-rich Low_complexity Low_complexity 1 116 0 300 342 84 13 chr2 46129448 46129603 -204558251 + L2 LINE L2 3107 3272 0 2251 100 3 0 chr2 46130005 46130295 -204557559 - AluY SINE Alu -20 291 1 508 305 58 6 chr2 46130396 46130570 -204557284 - MIR SINE MIR -71 191 9 198 0 0 0 chr2 46130584 46130606 -204557248 + (TTTTC)n Simple_repeat Simple_repeat 2 23 0 1254 34 0 0 chr2 46130606 46130752 -204557102 - L1PA3 LINE L1 -7 6148 6003 1148 29 0 0 chr2 46130752 46130890 -204556964 + L1PA2 LINE L1 5764 5901 -254 2493 191 46 28 chr2 46131076 46131579 -204556275 - MLT2B1 LTR ERVL -8 512 1 924 182 5 73 chr2 46131604 46131824 -204556030 - L1MB7 LINE L1 -8 6176 5972 1100 152 0 18 chr2 46131830 46132001 -204555853 - AluJ SINE Alu -8 304 137 808 77 59 6 chr2 46132002 46132172 -204555682 + (TA)n Simple_repeat Simple_repeat 2 180 0 590 183 70 0 chr2 46132172 46132287 -204555567 - AluJ SINE Alu -181 131 9 1600 169 27 15 chr2 46132425 46132757 -204555097 - L1MC1 LINE L1 0 6333 5998 1784 210 140 75 chr2 46133058 46134028 -204553826 - L1MC5 LINE L1 -33 7928 6896 21 0 0 0 chr2 46135095 46135116 -204552738 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 46135737 46135772 -204552082 + AT_rich Low_complexity Low_complexity 1 35 0 214 366 83 65 chr2 46137214 46137430 -204550424 - L2 LINE L2 -13 3259 3040 2283 95 7 3 chr2 46137559 46137855 -204549999 - AluSx SINE Alu -15 297 1 2274 115 0 0 chr2 46137984 46138280 -204549574 - AluSq SINE Alu -17 296 1 11167 162 31 20 chr2 46138280 46141069 -204546785 + L1PB2 LINE L1 2480 5236 -1617 2194 120 0 10 chr2 46141069 46141369 -204546485 - AluSx SINE Alu -15 297 1 11167 162 31 20 chr2 46141369 46142300 -204545554 + L1PB2 LINE L1 5236 6155 -698 1782 174 10 3 chr2 46142300 46142598 -204545256 - AluJb SINE Alu -6 306 7 11167 162 31 20 chr2 46142598 46142829 -204545025 + L1PB2 LINE L1 6155 6382 -471 2383 88 0 3 chr2 46142829 46143137 -204544717 + AluSg1 SINE Alu 1 307 -2 11167 162 31 20 chr2 46143137 46143517 -204544337 + L1PB2 LINE L1 6382 6848 -5 495 33 0 0 chr2 46143688 46143749 -204544105 + (TG)n Simple_repeat Simple_repeat 2 62 0 1993 100 76 14 chr2 46143763 46144052 -204543802 + AluSq SINE Alu 1 307 -6 4364 216 57 21 chr2 46144101 46144886 -204542968 - L1MC4 LINE L1 -141 7901 7146 231 114 0 0 chr2 46144886 46144921 -204542933 + (TA)n Simple_repeat Simple_repeat 2 36 0 4364 216 57 21 chr2 46144921 46145211 -204542643 - L1MC4 LINE L1 -896 7146 6778 1932 148 3 0 chr2 46145211 46145502 -204542352 + AluJb SINE Alu 1 292 -20 4364 216 57 21 chr2 46145502 46145598 -204542256 - L1MC4 LINE L1 -1264 6778 6687 735 298 65 20 chr2 46145584 46146290 -204541564 - L1M4 LINE L1 -1121 5025 4279 * 1381 171 0 0 chr2 46146317 46146528 -204541326 + AluJb SINE Alu 88 298 -14 2347 74 10 7 chr2 46146589 46146887 -204540967 + AluSp SINE Alu 1 299 -14 444 37 0 0 chr2 46147226 46147280 -204540574 + (CA)n Simple_repeat Simple_repeat 2 55 0 240 35 0 0 chr2 46147279 46147308 -204540546 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 21 0 0 0 chr2 46148147 46148168 -204539686 + AT_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr2 46149664 46149706 -204538148 + AT_rich Low_complexity Low_complexity 1 42 0 197 312 21 54 chr2 46150132 46150225 -204537629 - L2 LINE L2 -32 3281 3192 226 0 0 56 chr2 46150274 46150310 -204537544 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 364 246 59 34 chr2 46150310 46150428 -204537426 - MIR SINE MIR -122 140 20 474 65 0 0 chr2 46150896 46150958 -204536896 + (CA)n Simple_repeat Simple_repeat 2 63 0 921 196 25 0 chr2 46152123 46152286 -204535568 + FAM SINE Alu 5 171 -4 279 196 290 28 chr2 46152425 46152532 -204535322 + MIR SINE MIR 110 244 -18 239 235 88 49 chr2 46152870 46152972 -204534882 - L2 LINE L2 -1 3312 3207 2730 192 60 12 chr2 46153180 46153775 -204534079 + MLT1E3 LTR MaLR 1 624 0 647 122 20 0 chr2 46154275 46154373 -204533481 - FRAM SINE Alu -10 166 67 1781 170 37 3 chr2 46154861 46155161 -204532693 + AluJo SINE Alu 3 312 0 408 206 29 22 chr2 46156498 46156608 -204531246 - MIR SINE MIR -38 224 115 1299 121 73 26 chr2 46156731 46156963 -204530891 - L1PB4 LINE L1 -2 6154 5912 216 342 51 0 chr2 46157162 46157241 -204530613 + L3 LINE CR1 1494 1576 -1 892 248 74 9 chr2 46157328 46157558 -204530296 - MIR SINE MIR -12 250 6 1857 182 7 0 chr2 46158106 46158402 -204529452 - AluSx SINE Alu -14 298 1 314 316 68 38 chr2 46158844 46158977 -204528877 - L2 LINE L2 0 3272 3136 541 209 6 51 chr2 46159042 46159196 -204528658 + MIR SINE MIR 22 242 -20 767 207 0 0 chr2 46159196 46159331 -204528523 + AluJo SINE Alu 2 136 -176 1584 199 10 20 chr2 46159334 46159635 -204528219 + AluJb SINE Alu 5 302 -10 1081 302 141 35 chr2 46159943 46160795 -204527059 - L2 LINE L2 -655 2659 1718 2322 109 0 0 chr2 46160869 46161180 -204526674 - AluSx SINE Alu -1 311 1 2923 9 0 0 chr2 46161192 46161509 -204526345 - AluYb8 SINE Alu -1 317 1 912 112 8 30 chr2 46161537 46161671 -204526183 + FLAM_C SINE Alu 2 132 -11 255 170 0 0 chr2 46162293 46162340 -204525514 + CT-rich Low_complexity Low_complexity 2 48 0 411 73 0 0 chr2 46162760 46162815 -204525039 + (TTCA)n Simple_repeat Simple_repeat 2 56 0 1587 163 62 4 chr2 46162820 46163078 -204524776 - AluJo SINE Alu -37 275 3 2329 139 15 12 chr2 46163286 46163688 -204524166 + L1PA16 LINE L1 5757 6159 -7 189 121 0 0 chr2 46163688 46163721 -204524133 + (TG)n Simple_repeat Simple_repeat 2 34 0 249 108 0 0 chr2 46163721 46163758 -204524096 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 239 54 27 0 chr2 46163761 46163798 -204524056 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 842 315 187 72 chr2 46163943 46165016 -204522838 - L3 LINE CR1 -3 1574 306 1738 142 51 30 chr2 46165016 46165311 -204522543 - AluJo SINE Alu -10 302 2 842 315 187 72 chr2 46165311 46165618 -204522236 - L3 LINE CR1 -1271 306 36 825 203 165 9 chr2 46167117 46167311 -204520543 - MIR SINE MIR 0 262 31 2211 124 0 0 chr2 46167311 46167601 -204520253 - AluSx SINE Alu -22 290 1 825 203 165 9 chr2 46167601 46167618 -204520236 - MIR SINE MIR -231 31 18 276 261 118 31 chr2 46167700 46167861 -204519993 - MIR SINE MIR 0 262 88 27 49 0 0 chr2 46167865 46167906 -204519948 + AT_rich Low_complexity Low_complexity 1 41 0 5217 42 0 14 chr2 46168208 46168855 -204518999 - L1PA5 LINE L1 -1 6153 5516 2233 111 3 0 chr2 46168917 46169215 -204518639 - AluSx SINE Alu -13 299 1 207 0 0 0 chr2 46169278 46169301 -204518553 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1830 119 43 25 chr2 46169303 46169580 -204518274 - AluSq SINE Alu -31 282 1 437 305 38 64 chr2 46170052 46170238 -204517616 + MIR3 SINE MIR 20 198 -28 419 193 108 97 chr2 46170304 46170350 -204517504 - MER5B DNA MER1_type 0 178 134 189 0 0 0 chr2 46170350 46170371 -204517483 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 419 193 108 97 chr2 46170371 46170500 -204517354 - MER5B DNA MER1_type -44 134 1 390 329 115 65 chr2 46172609 46172949 -204514905 - L2 LINE L2 0 3272 2916 217 289 110 51 chr2 46173287 46173671 -204514183 - L2 LINE L2 -329 2943 2523 189 237 0 0 chr2 46174258 46174296 -204513558 + L3 LINE CR1 1537 1574 -3 698 183 0 29 chr2 46176433 46176570 -204511284 + FLAM_A SINE Alu 1 133 0 1186 145 72 0 chr2 46176722 46176943 -204510911 - L1MB3 LINE L1 -2 6181 5945 845 136 0 0 chr2 46176964 46177082 -204510772 - FLAM_C SINE Alu -20 123 6 1454 190 9 19 chr2 46177086 46177141 -204510713 - L1MB3 LINE L1 -244 5939 5885 432 274 40 53 chr2 46177141 46177444 -204510410 - L1PA14 LINE L1 -277 5884 5586 1169 148 261 7 chr2 46177453 46177744 -204510110 - L1M3 LINE L1 -457 5726 5362 794 190 48 9 chr2 46177924 46178135 -204509719 - L1PA14 LINE L1 -748 5408 5188 559 248 29 116 chr2 46178214 46178670 -204509184 - L1M3 LINE L1 -948 5198 4783 1728 268 38 19 chr2 46178816 46179345 -204508509 - MER74B LTR ERVL -4 618 80 227 237 27 119 chr2 46179382 46179476 -204508378 - L1M3 LINE L1 -1543 4603 4502 207 0 0 0 chr2 46179476 46179499 -204508355 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 1906 118 3 51 chr2 46179499 46179795 -204508059 - AluSx SINE Alu -30 282 1 2122 127 0 0 chr2 46179805 46180119 -204507735 - AluSx SINE Alu 0 314 1 227 237 27 119 chr2 46180119 46180230 -204507624 - L1M3 LINE L1 -1652 4494 4405 1547 162 60 25 chr2 46180329 46180613 -204507241 + AluJb SINE Alu 2 295 -17 2490 93 0 3 chr2 46180785 46181098 -204506756 + AluSq SINE Alu 1 312 -1 297 261 57 0 chr2 46181959 46182047 -204505807 + MER34 LTR ERV1 3 95 -447 1827 192 0 0 chr2 46182088 46182380 -204505474 + AluJb SINE Alu 12 303 -9 564 84 0 0 chr2 46182384 46182467 -204505387 + (GGGAGA)n Simple_repeat Simple_repeat 2 84 0 567 303 41 12 chr2 46182614 46182858 -204504996 + MER34 LTR ERV1 257 507 -35 321 26 0 0 chr2 46184984 46185022 -204502832 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 261 406 14 7 chr2 46186051 46186189 -204501665 - MIR3 SINE MIR -67 141 3 2278 95 0 0 chr2 46186460 46186756 -204501098 + AluSg SINE Alu 2 297 -13 407 261 17 52 chr2 46187930 46188045 -204499809 - L2 LINE L2 -4 3268 3158 1706 183 6 13 chr2 46188252 46188563 -204499291 + AluJo SINE Alu 1 309 -3 263 210 0 0 chr2 46188575 46188637 -204499217 - L1ME2 LINE L1 -24 6140 6079 830 223 134 32 chr2 46188700 46189014 -204498840 - L1ME2 LINE L1 -73 6091 5746 219 280 127 59 chr2 46189345 46189463 -204498391 - L2 LINE L2 0 3272 3147 2402 71 0 3 chr2 46189513 46189808 -204498046 + AluY SINE Alu 1 294 -17 457 351 66 28 chr2 46189845 46190133 -204497721 + L3 LINE CR1 177 475 -1102 2878 39 11 0 chr2 46240555 46240912 -204446942 - L1P2 LINE L1 -540 5614 5254 870 165 0 0 chr2 46241237 46241444 -204446410 - FLAM_A SINE Alu 0 207 1 540 259 123 4 chr2 46241628 46241856 -204445998 - HAL1 LINE L1 -760 1747 1493 927 263 126 63 chr2 46241979 46242675 -204445179 - L1MEc LINE L1 -5391 1005 266 625 269 16 10 chr2 46242677 46242870 -204444984 - L1MEc LINE L1 -6185 211 18 415 336 70 14 chr2 46242904 46243047 -204444807 - L2 LINE L2 -6 3266 3116 5790 30 0 0 chr2 46243227 46243929 -204443925 + L1PA3 LINE L1 5464 6165 0 677 200 23 0 chr2 46243979 46244109 -204443745 - FLAM_C SINE Alu -10 133 1 1848 234 65 24 chr2 46244118 46244869 -204442985 - L1MEc LINE L1 -4048 2348 1567 21 0 0 0 chr2 46244876 46244897 -204442957 + AT_rich Low_complexity Low_complexity 1 21 0 416 265 37 0 chr2 46244929 46245065 -204442789 - L1MA9 LINE L1 -38 6274 6134 2305 86 3 6 chr2 46245099 46245424 -204442430 + MLT2A1 LTR ERVL 2 325 -119 253 373 8 32 chr2 46245571 46245599 -204442255 - L2 LINE L2 -2 3270 3243 768 253 6 6 chr2 46245599 46245765 -204442089 + FRAM SINE Alu 1 166 0 253 373 8 32 chr2 46245765 46245862 -204441992 - L2 LINE L2 -29 3243 3148 277 233 105 35 chr2 46245999 46246171 -204441683 - Charlie7 DNA MER1_type -3 2609 2426 * 355 219 42 0 chr2 46246146 46246242 -204441612 - Charlie7 DNA MER1_type -2507 105 6 31 26 0 0 chr2 46248232 46248270 -204439584 + AT_rich Low_complexity Low_complexity 1 38 0 2199 93 33 10 chr2 46248457 46248759 -204439095 + AluSc SINE Alu 1 309 0 962 224 53 29 chr2 46250044 46250289 -204437565 + MIR SINE MIR 1 251 -11 518 241 216 0 chr2 46251110 46251272 -204436582 + MIR SINE MIR 10 206 -56 226 246 15 15 chr2 46251314 46251379 -204436475 + (CTA)n Simple_repeat Simple_repeat 1 65 0 2220 112 0 0 chr2 46255374 46255660 -204432194 + AluSx SINE Alu 1 286 -26 922 68 26 0 chr2 46256852 46256969 -204430885 + AluY SINE Alu 1 120 -191 2089 168 34 15 chr2 46256969 46257381 -204430473 - Tigger6a DNA MER2_type -552 531 112 318 256 103 26 chr2 46257483 46257600 -204430254 - L2 LINE L2 -767 2547 2422 1170 189 40 86 chr2 46257817 46257866 -204429988 - L1ME1 LINE L1 -11 6155 6105 5476 125 15 7 chr2 46257866 46259216 -204428638 - L1PA16 LINE L1 -2 6164 4797 1170 189 40 86 chr2 46259216 46259594 -204428260 - L1ME1 LINE L1 -61 6105 5748 298 178 144 0 chr2 46259594 46259684 -204428170 + L1P LINE L1 5122 5224 -922 6273 208 28 73 chr2 46259691 46259864 -204427990 - L1ME1 LINE L1 -406 5758 5579 5817 32 3 0 chr2 46259864 46260548 -204427306 - L1PA4 LINE L1 -4 6151 5466 6273 208 28 73 chr2 46260548 46261996 -204425858 - L1ME1 LINE L1 -585 5579 4066 2043 128 77 6 chr2 46261996 46262333 -204425521 - MLT1A1 LTR MaLR -4 361 1 6273 208 28 73 chr2 46262333 46263231 -204424623 - L1ME1 LINE L1 -2098 4066 3351 2217 109 33 7 chr2 46263231 46263535 -204424319 - AluSx SINE Alu 0 312 1 6273 208 28 73 chr2 46263535 46263595 -204424259 - L1ME1 LINE L1 -2813 3351 3290 1053 191 0 6 chr2 46263603 46263776 -204424078 - AluJo SINE Alu -136 176 5 480 196 24 48 chr2 46263783 46263992 -204423862 - L1ME1 LINE L1 -2868 3278 3075 570 140 0 30 chr2 46264070 46264170 -204423684 - FLAM_A SINE Alu -2 140 44 2302 244 33 13 chr2 46264174 46264939 -204422915 - L1ME1 LINE L1 -3110 3036 2257 1080 169 0 16 chr2 46264956 46265140 -204422714 - AluJb SINE Alu 0 312 132 6938 30 0 0 chr2 46265140 46266013 -204421841 + L1P LINE L1 4353 5225 -921 458 277 27 20 chr2 46266530 46266678 -204421176 - MIR SINE MIR -113 149 1 1280 221 125 11 chr2 46266801 46267241 -204420613 - MER20B DNA MER1_type -12 771 282 21 36 0 0 chr2 46268833 46268861 -204418993 + AT_rich Low_complexity Low_complexity 1 28 0 663 307 43 4 chr2 46270095 46270372 -204417482 + L1ME4a LINE L1 5598 5885 -236 2040 147 0 7 chr2 46270392 46270698 -204417156 + AluSx SINE Alu 1 304 -8 308 237 69 23 chr2 46270731 46270862 -204416992 + L1ME4a LINE L1 5967 6103 -18 303 180 33 0 chr2 46271331 46271392 -204416462 - L2 LINE L2 0 3313 3251 489 294 113 11 chr2 46271631 46271808 -204416046 + MIR3 SINE MIR 7 201 -7 23 0 0 0 chr2 46273428 46273451 -204414403 + AT_rich Low_complexity Low_complexity 1 23 0 264 204 0 0 chr2 46273625 46273669 -204414185 - AluJ/monomer SINE Alu -13 289 246 1007 105 0 0 chr2 46273672 46273805 -204414049 - AluSq/x SINE Alu -180 133 1 421 291 106 19 chr2 46273867 46274132 -204413722 - L1ME LINE L1 -303 5818 5531 1474 201 92 18 chr2 46274766 46275159 -204412695 + MLT1C LTR MaLR 46 467 0 339 373 26 63 chr2 46275638 46275941 -204411913 + L2 LINE L2 2980 3271 -1 296 296 23 0 chr2 46276146 46276234 -204411620 - MIR SINE MIR -14 248 159 369 304 74 16 chr2 46276459 46276606 -204411248 - MIR SINE MIR -38 170 21 423 286 157 0 chr2 46276647 46276794 -204411060 - L3 LINE CR1 -238 1339 1170 399 267 103 26 chr2 46277018 46277250 -204410604 - L1MC4a LINE L1 -1875 5933 5684 2174 61 0 14 chr2 46277271 46277548 -204410306 - AluY SINE Alu -2 309 37 341 210 30 20 chr2 46278393 46278493 -204409361 + MER97a DNA MER1_type? 11 111 -783 1481 112 0 0 chr2 46278502 46278699 -204409155 - AluSq SINE Alu -20 293 97 479 210 53 107 chr2 46279357 46279613 -204408241 - MIR SINE MIR 0 262 9 262 298 113 52 chr2 46279672 46280018 -204407836 - L2 LINE L2 -800 2514 2148 277 253 62 144 chr2 46280074 46280141 -204407713 + MIR SINE MIR 79 150 -112 2579 139 5 5 chr2 46280141 46280572 -204407282 + L1MB3 LINE L1 5751 6181 -2 277 253 62 144 chr2 46280572 46280698 -204407156 + MIR SINE MIR 150 256 -6 246 279 13 13 chr2 46280716 46280795 -204407059 + GA-rich Low_complexity Low_complexity 2 80 0 452 285 139 13 chr2 46281758 46281909 -204405945 - L2 LINE L2 -1 3271 3102 495 87 0 0 chr2 46282684 46282753 -204405101 + (TTCC)n Simple_repeat Simple_repeat 4 72 0 1731 194 0 9 chr2 46282753 46283068 -204404786 - AluJo SINE Alu 0 312 1 498 228 129 10 chr2 46284572 46284765 -204403089 + MER20 DNA MER1_type 1 216 -3 860 150 45 0 chr2 46285386 46285519 -204402335 + MER5A DNA MER1_type 1 139 -50 1031 186 8 51 chr2 46285523 46285759 -204402095 - AluJo SINE Alu -2 310 85 819 146 8 0 chr2 46285791 46285914 -204401940 - FLAM_C SINE Alu -9 124 1 189 143 0 0 chr2 46285914 46285942 -204401912 + MER5A DNA MER1_type 127 154 -35 1296 259 71 19 chr2 46286006 46286274 -204401580 + L1ME3A LINE L1 5160 5413 -757 2216 131 0 0 chr2 46286274 46286579 -204401275 + AluJb SINE Alu 1 305 -7 1296 259 71 19 chr2 46286579 46287054 -204400800 + L1ME3A LINE L1 5413 5948 -222 2120 147 0 3 chr2 46287129 46287441 -204400413 + AluSx SINE Alu 1 311 -1 2183 285 176 28 chr2 46287602 46288888 -204398966 - L2 LINE L2 -1479 1835 360 2160 102 7 0 chr2 46289304 46289599 -204398255 + AluSg SINE Alu 1 297 -13 182 286 79 0 chr2 46290439 46290502 -204397352 - L2 LINE L2 0 3272 3205 436 241 21 126 chr2 46290806 46290841 -204397013 + MER5B DNA MER1_type 8 45 -133 2416 77 3 0 chr2 46290841 46291151 -204396703 + AluSq SINE Alu 1 311 -2 436 241 21 126 chr2 46291151 46291306 -204396548 + MER5B DNA MER1_type 45 178 0 468 304 101 22 chr2 46291842 46292069 -204395785 - MIR SINE MIR -10 252 8 750 238 113 8 chr2 46292191 46292439 -204395415 + L2 LINE L2 3040 3313 0 1085 214 60 60 chr2 46292942 46293344 -204394510 + L1MC4 LINE L1 7641 8042 0 1283 202 107 18 chr2 46293348 46293620 -204394234 + AluJo SINE Alu 1 296 -16 852 278 106 47 chr2 46293705 46294112 -204393742 + L3 LINE CR1 849 1279 -298 1773 126 0 0 chr2 46294656 46294902 -204392952 + AluSx SINE Alu 61 306 -6 189 147 0 0 chr2 46294932 46294966 -204392888 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 1628 153 35 4 chr2 46295343 46295598 -204392256 + AluJb SINE Alu 40 302 -10 2243 163 65 37 chr2 46295806 46296315 -204391539 + Charlie1b DNA MER1_type 1 523 0 825 149 0 8 chr2 46296632 46296766 -204391088 - FLAM_C SINE Alu 0 133 1 1788 174 3 20 chr2 46296775 46297074 -204390780 - AluJo SINE Alu -18 294 1 268 278 61 70 chr2 46301936 46302051 -204385803 + MIR3 SINE MIR 13 126 -82 2501 51 0 10 chr2 46302096 46302410 -204385444 + AluY SINE Alu 1 311 0 182 247 137 14 chr2 46303633 46303706 -204384148 - L2 LINE L2 -77 3236 3155 2522 71 0 0 chr2 46304669 46304977 -204382877 + AluY SINE Alu 1 308 -3 757 127 121 0 chr2 46305002 46305159 -204382695 + L1MD3 LINE L1 7818 7993 -2 344 297 186 7 chr2 46305854 46305999 -204381855 + L2 LINE L2 3102 3272 0 321 135 0 0 chr2 46307025 46307077 -204380777 + (TA)n Simple_repeat Simple_repeat 2 53 0 832 62 0 36 chr2 46307817 46307981 -204379873 - AluSg/x SINE Alu 0 335 176 432 276 105 33 chr2 46308824 46308976 -204378878 - MIR3 SINE MIR -9 199 37 527 317 95 5 chr2 46309010 46309231 -204378623 + MIR SINE MIR 13 253 -9 2225 116 0 0 chr2 46309251 46309543 -204378311 + AluSx SINE Alu 1 292 -20 322 214 116 18 chr2 46309604 46309716 -204378138 - MIR SINE MIR -75 187 65 458 296 7 15 chr2 46310230 46310365 -204377489 + MIR SINE MIR 2 135 -127 526 252 17 0 chr2 46310827 46310946 -204376908 - MIR SINE MIR -26 236 116 476 244 169 29 chr2 46310937 46311179 -204376675 + L2 LINE L2 3038 3313 0 * 268 256 128 0 chr2 46311169 46311255 -204376599 - MIR SINE MIR -130 132 36 * 497 293 15 0 chr2 46311297 46311430 -204376424 - MIR3 SINE MIR -30 178 44 1048 309 63 33 chr2 46311511 46312051 -204375803 + L2 LINE L2 2419 2974 -340 198 231 0 0 chr2 46312151 46312190 -204375664 + L2 LINE L2 3261 3299 -14 2021 129 38 0 chr2 46312848 46313135 -204374719 + AluJb SINE Alu 1 298 -14 853 99 0 0 chr2 46313723 46313844 -204374010 - L1PA15 LINE L1 -5 6160 6040 637 215 118 51 chr2 46314157 46314394 -204373460 + HAL1 LINE L1 47 299 -2208 419 208 0 0 chr2 46314396 46314473 -204373381 - MER2 DNA MER2_type -1 344 268 2331 112 0 0 chr2 46314495 46314799 -204373055 - AluSx SINE Alu -8 304 1 495 234 0 19 chr2 46314855 46314962 -204372892 - MER2 DNA MER2_type -240 105 1 881 227 115 29 chr2 46314962 46315240 -204372614 + HAL1 LINE L1 299 600 -1907 1272 213 81 27 chr2 46315266 46315749 -204372105 + HAL1 LINE L1 845 1353 -1154 2009 246 66 54 chr2 46315749 46316587 -204371267 + HAL1 LINE L1 1645 2492 -15 1214 194 79 11 chr2 46316661 46316940 -204370914 - L1MB8 LINE L1 -9 6169 5872 13619 93 40 90 chr2 46316942 46318148 -204369706 - Tigger1 DNA MER2_type 0 2418 1217 888 184 22 22 chr2 46318148 46318327 -204369527 - FAM SINE Alu -6 43 1 13619 93 40 90 chr2 46318327 46319487 -204368367 - Tigger1 DNA MER2_type -1201 1217 1 2399 135 41 11 chr2 46319489 46319926 -204367928 - L1MB8 LINE L1 -309 5869 5420 270 277 113 31 chr2 46319924 46320153 -204367701 + L1ME4a LINE L1 5432 5682 -439 * 258 57 0 0 chr2 46320181 46320216 -204367638 + MADE1 DNA Mariner 42 76 -4 270 249 123 62 chr2 46320227 46320552 -204367302 + L1ME4a LINE L1 5716 6060 -61 766 275 39 26 chr2 46320986 46321219 -204366635 - MIR SINE MIR -25 237 2 435 191 35 9 chr2 46321702 46321817 -204366037 - L1ME4a LINE L1 -2 6119 6002 2276 98 20 0 chr2 46322054 46322351 -204365503 + AluSg SINE Alu 1 303 -7 207 305 0 0 chr2 46322996 46323055 -204364799 + A-rich Low_complexity Low_complexity 1 59 0 220 333 0 0 chr2 46323804 46323870 -204363984 + CT-rich Low_complexity Low_complexity 2 67 0 243 0 0 0 chr2 46326768 46326795 -204361059 + (T)n Simple_repeat Simple_repeat 1 27 0 22 56 0 0 chr2 46328545 46328581 -204359273 + AT_rich Low_complexity Low_complexity 1 36 0 283 283 33 0 chr2 46329867 46329927 -204357927 - L2 LINE L2 -56 3216 3155 868 133 22 0 chr2 46330035 46330170 -204357684 - BC200 scRNA scRNA -60 140 3 392 296 193 16 chr2 46330290 46330511 -204357343 - MIR SINE MIR -1 261 5 33 56 0 0 chr2 46330991 46331045 -204356809 + AT_rich Low_complexity Low_complexity 1 54 0 21 0 0 0 chr2 46331621 46331642 -204356212 + AT_rich Low_complexity Low_complexity 1 21 0 2234 120 3 0 chr2 46333468 46333768 -204354086 + AluSx SINE Alu 1 301 -11 706 201 0 28 chr2 46333983 46334127 -204353727 - MIR SINE MIR 0 262 123 1060 173 4 56 chr2 46334226 46334457 -204353397 + MER20 DNA MER1_type 1 219 0 23 0 0 0 chr2 46336393 46336416 -204351438 + AT_rich Low_complexity Low_complexity 1 23 0 298 121 91 15 chr2 46336528 46336594 -204351260 - MER69 DNA AcHobo 0 2526 2456 815 144 36 0 chr2 46336600 46336739 -204351115 - MER69 DNA AcHobo -1082 144 1 216 227 40 53 chr2 46337519 46337594 -204350260 + MIR3 SINE MIR 109 182 -26 479 288 25 0 chr2 46337946 46338064 -204349790 - L2 LINE L2 -13 3300 3180 347 244 113 18 chr2 46339106 46339274 -204348580 - L1ME4a LINE L1 -307 5814 5631 417 314 107 22 chr2 46339608 46340057 -204347797 - L1ME4a LINE L1 -1897 4249 3763 2143 161 64 113 chr2 46340096 46340244 -204347610 - L1MB8 LINE L1 -9 6169 6015 690 153 0 127 chr2 46340244 46340394 -204347460 + FLAM_C SINE Alu 1 131 -2 2143 161 64 113 chr2 46340394 46340920 -204346934 - L1MB8 LINE L1 -163 6015 5528 401 221 221 7 chr2 46341636 46341790 -204346064 - MER5A DNA MER1_type 0 189 3 1877 137 7 0 chr2 46341867 46342212 -204345642 + AluSg SINE Alu 2 348 0 1031 165 0 0 chr2 46342672 46342836 -204345018 + FAM SINE Alu 1 164 -11 236 264 77 137 chr2 46342894 46343076 -204344778 + MER5A DNA MER1_type 5 175 -14 325 242 98 45 chr2 46343465 46343597 -204344257 + MER20B DNA MER1_type 57 195 -588 342 0 0 0 chr2 46343691 46343729 -204344125 + (TG)n Simple_repeat Simple_repeat 2 39 0 256 375 38 68 chr2 46343867 46344235 -204343619 - L2 LINE L2 0 3272 2916 1644 135 56 8 chr2 46344387 46344653 -204343201 - L1PA16 LINE L1 0 6166 5888 10993 173 18 10 chr2 46344653 46346478 -204341376 - L1PA16 LINE L1 -488 5678 3838 1815 159 0 10 chr2 46346478 46346773 -204341081 - AluJb SINE Alu -20 292 1 10993 173 18 10 chr2 46346773 46347458 -204340396 - L1PA16 LINE L1 -2328 3838 3160 1032 219 5 0 chr2 46348339 46348526 -204339328 + MER5A DNA MER1_type 1 188 -1 189 339 73 30 chr2 46348736 46348901 -204338953 + L2 LINE L2 2914 3085 -187 180 167 83 0 chr2 46349043 46349091 -204338763 + L2 LINE L2 2189 2240 -1074 2236 122 0 0 chr2 46349606 46349909 -204337945 + AluSx SINE Alu 1 303 -9 231 268 128 18 chr2 46350249 46350453 -204337401 - MIR SINE MIR -6 256 4 1894 163 0 20 chr2 46350495 46350801 -204337053 - AluJo SINE Alu -12 300 1 259 184 0 0 chr2 46351144 46351182 -204336672 - FRAM/FAM SINE Alu -129 37 1 2230 191 23 36 chr2 46351186 46351740 -204336114 - L1M LINE L1 -737 5429 4874 1662 255 179 7 chr2 46351738 46352354 -204335500 - L1MEc LINE L1 -1638 4577 3856 * 5864 226 53 21 chr2 46352423 46352954 -204334900 - L1MEc LINE L1 -2804 3411 2899 2088 128 10 0 chr2 46352954 46353259 -204334595 - AluSx SINE Alu -4 308 1 5864 226 53 21 chr2 46353259 46354167 -204333687 - L1MEc LINE L1 -3316 2899 2022 1751 130 0 41 chr2 46354167 46354436 -204333418 + AluSq SINE Alu 1 258 -55 396 0 0 0 chr2 46354445 46354489 -204333365 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 5864 226 53 21 chr2 46354489 46355668 -204332186 - L1MEc LINE L1 -4200 2015 731 1392 213 0 4 chr2 46355672 46355930 -204331924 - AluJb SINE Alu -21 291 35 2976 222 46 24 chr2 46355930 46356286 -204331568 - L1MEc LINE L1 -5652 744 397 354 45 0 0 chr2 46356286 46356330 -204331524 + (TC)n Simple_repeat Simple_repeat 1 44 0 2976 222 46 24 chr2 46356330 46356395 -204331459 - L1MEc LINE L1 -5999 397 335 2250 118 7 0 chr2 46356395 46356701 -204331153 - AluSg SINE Alu -2 308 1 2976 222 46 24 chr2 46356701 46356995 -204330859 - L1MEc LINE L1 -6061 335 12 256 238 0 16 chr2 46357039 46357102 -204330752 - MIR SINE MIR 0 262 201 3888 294 80 57 chr2 46357106 46358672 -204329182 - L2 LINE L2 0 3313 1785 1961 142 3 7 chr2 46358672 46358974 -204328880 - AluJo SINE Alu -9 303 3 3888 294 80 57 chr2 46358974 46359303 -204328551 - L2 LINE L2 -1528 1785 1465 1703 161 0 7 chr2 46359303 46359582 -204328272 - AluJo SINE Alu -35 277 1 3888 294 80 57 chr2 46359582 46360138 -204327716 - L2 LINE L2 -1848 1465 802 733 229 244 0 chr2 46360139 46360397 -204327457 + MER5C DNA MER1_type 2 322 -2 220 190 103 0 chr2 46360407 46360465 -204327389 - L2 LINE L2 -2510 804 741 219 170 21 43 chr2 46360505 46360552 -204327302 + MER91B DNA MER1_type 23 68 -122 578 227 52 19 chr2 46360611 46360765 -204327089 - MIR SINE MIR -97 165 7 21 0 0 0 chr2 46363864 46363885 -204323969 + AT_rich Low_complexity Low_complexity 1 21 0 205 195 35 46 chr2 46364622 46364709 -204323145 + (CATATA)n Simple_repeat Simple_repeat 2 87 0 180 0 0 0 chr2 46365105 46365125 -204322729 + (CAGG)n Simple_repeat Simple_repeat 3 22 0 283 313 23 53 chr2 46366567 46366698 -204321156 - MIR3 SINE MIR -48 160 34 183 42 0 0 chr2 46367023 46367047 -204320807 + (TG)n Simple_repeat Simple_repeat 1 24 0 1941 66 0 21 chr2 46367743 46367986 -204319868 + AluY SINE Alu 1 238 -73 395 309 45 0 chr2 46368648 46368758 -204319096 + L2 LINE L2 3193 3307 -6 277 214 67 56 chr2 46368802 46368891 -204318963 - MIR SINE MIR -68 140 51 2006 147 0 20 chr2 46369299 46369605 -204318249 - AluSx SINE Alu -8 304 5 856 198 78 74 chr2 46369844 46370101 -204317753 + MIR SINE MIR 2 259 -3 2280 150 92 8 chr2 46370234 46370627 -204317227 - MSTB LTR MaLR 0 426 1 638 36 0 48 chr2 46370759 46370842 -204317012 - MADE1 DNA Mariner -1 79 1 911 156 231 91 chr2 46371102 46371422 -204316432 - MLT1A1 LTR MaLR 0 365 1 1372 181 91 50 chr2 46371657 46371955 -204315899 + AluJo SINE Alu 1 310 -2 2590 64 0 3 chr2 46374988 46375300 -204312554 + AluY SINE Alu 1 311 0 290 269 100 8 chr2 46375519 46375649 -204312205 + MIR SINE MIR 101 242 -20 313 209 209 70 chr2 46375885 46376014 -204311840 + MIR SINE MIR 17 163 -45 2166 101 3 36 chr2 46376095 46376402 -204311452 - AluSg SINE Alu -13 297 1 1824 146 18 0 chr2 46377675 46377950 -204309904 - AluJo SINE Alu -32 280 1 202 311 122 44 chr2 46378321 46378411 -204309443 - L2 LINE L2 -50 3222 3126 337 279 126 102 chr2 46378509 46378934 -204308920 - L2 LINE L2 -8 3264 2806 1822 76 0 4 chr2 46378934 46379159 -204308695 + AluY SINE Alu 76 299 -12 337 279 126 102 chr2 46379159 46379336 -204308518 - L2 LINE L2 -466 2806 2635 430 284 58 103 chr2 46379444 46379930 -204307924 - L2 LINE L2 -5 3267 2804 488 327 63 37 chr2 46380355 46380734 -204307120 - L2 LINE L2 -923 2391 2003 854 172 0 0 chr2 46380735 46380857 -204306997 + FLAM_C SINE Alu 1 122 -11 1355 32 0 6 chr2 46381039 46381197 -204306657 + L1PA4 LINE L1 5997 6153 -2 654 281 132 4 chr2 46381976 46382257 -204305597 - L2 LINE L2 -1 3312 2996 300 301 0 0 chr2 46383047 46383120 -204304734 + MIR3 SINE MIR 127 199 -9 184 262 140 75 chr2 46383219 46383326 -204304528 + MIR SINE MIR 108 221 -41 2178 111 0 17 chr2 46383470 46383767 -204304087 + AluSx SINE Alu 1 292 -20 258 261 54 22 chr2 46383822 46383914 -204303940 + MIR SINE MIR 156 250 -12 25 0 0 0 chr2 46384046 46384071 -204303783 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr2 46386870 46386892 -204300962 + (TA)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr2 46386892 46386914 -204300940 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 46387193 46387230 -204300624 + GC_rich Low_complexity Low_complexity 1 37 0 193 217 43 72 chr2 46389130 46389199 -204298655 + L2 LINE L2 2727 2793 -521 26 74 0 0 chr2 46389736 46389790 -204298064 + AT_rich Low_complexity Low_complexity 1 54 0 180 0 0 0 chr2 46395128 46395148 -204292706 + (T)n Simple_repeat Simple_repeat 1 20 0 252 0 0 0 chr2 46395274 46395302 -204292552 + (TG)n Simple_repeat Simple_repeat 1 28 0 538 241 96 59 chr2 46398678 46398898 -204288956 + MLT1H LTR MaLR 71 298 -251 568 193 47 53 chr2 46399066 46399256 -204288598 + MLT1H LTR MaLR 381 567 0 522 306 19 19 chr2 46399468 46399628 -204288226 + MIR3 SINE MIR 6 165 -43 15089 115 42 14 chr2 46399957 46401622 -204286232 + Tigger1 DNA MER2_type 30 1781 -637 2301 73 3 3 chr2 46401622 46401923 -204285931 + AluY SINE Alu 1 301 -10 15089 115 42 14 chr2 46401923 46402579 -204285275 + Tigger1 DNA MER2_type 1781 2417 -1 457 310 132 40 chr2 46402660 46402734 -204285120 - L2 LINE L2 -86 3227 3161 1606 194 0 0 chr2 46402734 46403022 -204284832 + AluSx SINE Alu 1 288 -24 457 310 132 40 chr2 46403022 46403608 -204284246 - L2 LINE L2 -152 3161 2500 1816 142 13 7 chr2 46404447 46404750 -204283104 + AluSp SINE Alu 1 305 -8 282 307 0 27 chr2 46404849 46404924 -204282930 - L2 LINE L2 -77 3195 3123 932 266 134 40 chr2 46405155 46405707 -204282147 - L2 LINE L2 0 3313 2814 2008 114 20 0 chr2 46405707 46406006 -204281848 - AluSg SINE Alu -3 307 3 1981 125 7 0 chr2 46406010 46406305 -204281549 - AluSx SINE Alu -15 297 1 932 266 134 40 chr2 46406305 46406402 -204281452 - L2 LINE L2 -501 2812 2590 249 241 0 17 chr2 46407003 46407061 -204280793 - MIR SINE MIR -62 146 90 184 195 98 0 chr2 46407939 46407980 -204279874 + L3b LINE CR1 1293 1337 -246 2293 109 45 31 chr2 46409635 46409994 -204277860 - THE1B LTR MaLR 0 364 1 361 346 105 42 chr2 46410000 46410306 -204277548 - L2 LINE L2 0 3272 2948 609 152 0 10 chr2 46410443 46410542 -204277312 + AluSg/x SINE Alu 118 215 -97 307 322 41 76 chr2 46410725 46410896 -204276958 + HAL1 LINE L1 9 173 -2334 740 227 0 0 chr2 46411164 46411296 -204276558 + FLAM_A SINE Alu 6 137 -5 306 236 142 4 chr2 46411385 46411610 -204276244 + HAL1 LINE L1 1031 1286 -1221 1051 264 162 7 chr2 46411650 46412112 -204275742 + HAL1 LINE L1 1368 1901 -606 799 168 0 0 chr2 46412184 46412303 -204275551 + FLAM_A SINE Alu 1 119 -14 1079 72 0 20 chr2 46412406 46412558 -204275296 + L1PA5 LINE L1 6005 6153 -1 393 168 137 32 chr2 46412949 46413044 -204274810 - MER53 DNA DNA -84 105 1 2248 85 3 0 chr2 46413081 46413375 -204274479 + AluSp SINE Alu 1 295 -18 1946 130 3 3 chr2 46413935 46414234 -204273620 + AluSx SINE Alu 1 299 -13 197 343 29 0 chr2 46415019 46415089 -204272765 - L2 LINE L2 -1 3312 3241 381 275 186 52 chr2 46416160 46416353 -204271501 - MIR SINE MIR -13 249 31 355 304 78 0 chr2 46416409 46416511 -204271343 + MIR SINE MIR 34 143 -65 770 266 118 21 chr2 46416554 46416791 -204271063 + MIR SINE MIR 2 261 -1 2168 98 3 3 chr2 46416841 46417136 -204270718 - AluSx SINE Alu -17 295 1 183 349 31 44 chr2 46417372 46417548 -204270306 - MIR SINE MIR -69 193 20 217 322 0 23 chr2 46417765 46417852 -204270002 + MIR SINE MIR 19 103 -105 185 0 0 39 chr2 46417972 46417998 -204269856 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 198 0 0 0 chr2 46418651 46418673 -204269181 + (A)n Simple_repeat Simple_repeat 1 22 0 306 0 0 0 chr2 46420638 46420672 -204267182 + (T)n Simple_repeat Simple_repeat 1 34 0 27 29 0 0 chr2 46425383 46425417 -204262437 + AT_rich Low_complexity Low_complexity 1 34 0 532 114 0 0 chr2 46425516 46425604 -204262250 - L1MB5 LINE L1 0 6174 6087 236 246 0 18 chr2 46425685 46425742 -204262112 - L2 LINE L2 -4 3268 3213 246 105 0 0 chr2 46426426 46426464 -204261390 + (ATG)n Simple_repeat Simple_repeat 1 38 0 486 261 62 8 chr2 46426696 46426826 -204261028 + MIR SINE MIR 50 186 -76 2274 73 3 7 chr2 46427806 46428108 -204259746 - AluSp SINE Alu -10 303 3 2387 145 43 48 chr2 46428932 46429094 -204258760 - L1MB4 LINE L1 -144 6036 5592 1653 191 0 0 chr2 46429094 46429377 -204258477 - AluJb SINE Alu -29 283 1 792 266 54 30 chr2 46429380 46429714 -204258140 - L1PB1 LINE L1 -268 5883 5542 344 241 25 38 chr2 46429748 46429870 -204257984 - MIR SINE MIR -68 140 71 360 373 100 7 chr2 46429978 46430128 -204257726 + L2 LINE L2 3109 3272 0 903 114 138 12 chr2 46430272 46430439 -204257415 - MER53 DNA DNA -1 188 1 2149 108 3 0 chr2 46433335 46433641 -204254213 - AluSx SINE Alu -4 308 2 745 221 81 0 chr2 46434849 46435021 -204252833 - MER53 DNA DNA -3 186 1 220 296 11 23 chr2 46435110 46435198 -204252656 + CT-rich Low_complexity Low_complexity 1 87 0 397 381 40 6 chr2 46435198 46435371 -204252483 + MIR SINE MIR 20 198 -64 446 213 75 30 chr2 46435947 46436075 -204251779 - MIR SINE MIR -25 237 113 3700 101 17 46 chr2 46436203 46436746 -204251108 - MER1A DNA MER1_type 0 527 1 275 234 16 133 chr2 46437041 46437169 -204250685 - MIR SINE MIR -136 126 14 2225 110 0 0 chr2 46437432 46437732 -204250122 + AluSq SINE Alu 1 300 -13 277 337 97 74 chr2 46438145 46438495 -204249359 + L2 LINE L2 2910 3267 -5 484 229 159 35 chr2 46439448 46439649 -204248205 + MLT1I LTR MaLR 10 235 -174 1420 101 41 27 chr2 46439651 46439870 -204247984 - MER30 DNA MER1_type -2 228 7 455 216 108 29 chr2 46439890 46440029 -204247825 + MLT1I LTR MaLR 260 409 0 497 276 238 0 chr2 46440405 46440590 -204247264 - MIR SINE MIR -21 241 13 245 350 45 45 chr2 46440818 46440975 -204246879 - L3b LINE CR1 -186 1397 1241 2085 116 0 28 chr2 46441041 46441359 -204246495 + AluSq SINE Alu 1 309 -4 1882 140 7 10 chr2 46441845 46442152 -204245702 - AluJb SINE Alu -6 306 1 436 267 185 0 chr2 46443326 46443472 -204244382 + MIR SINE MIR 21 193 -69 2521 172 30 55 chr2 46444312 46444842 -204243012 - Charlie1b DNA MER1_type -6 517 1 198 188 0 0 chr2 46445268 46445300 -204242554 + MIR SINE MIR 119 150 -112 338 294 35 0 chr2 46445352 46445437 -204242417 - MIR3 SINE MIR -44 164 77 2078 120 0 13 chr2 46445469 46445778 -204242076 - AluSx SINE Alu -7 305 1 392 205 0 6 chr2 46445716 46445796 -204242058 - AluS SINE Alu -238 62 1 1697 179 35 0 chr2 46445804 46446094 -204241760 + AluJb SINE Alu 13 312 0 273 173 19 19 chr2 46446119 46446171 -204241683 + MIR3 SINE MIR 135 186 -22 639 316 68 24 chr2 46447542 46447995 -204239859 + L1ME4a LINE L1 5510 5982 -139 1366 150 162 0 chr2 46448864 46449130 -204238724 + AluYa8 SINE Alu 1 309 -1 1865 147 55 3 chr2 46449975 46450090 -204237764 + AluSx SINE Alu 1 109 -203 321 26 0 0 chr2 46450090 46450128 -204237726 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1865 147 55 3 chr2 46450128 46450305 -204237549 + AluSx SINE Alu 109 308 -4 211 320 10 20 chr2 46450931 46451031 -204236823 + GA-rich Low_complexity Low_complexity 5 103 0 1562 196 21 0 chr2 46451741 46452027 -204235827 + MER82 DNA MER2_type 2 293 -360 290 279 0 0 chr2 46452398 46452477 -204235377 + L2 LINE L2 3231 3309 -4 1606 150 0 40 chr2 46453217 46453490 -204234364 + AluJb SINE Alu 35 296 -16 1347 299 54 19 chr2 46454570 46454930 -204232924 + L2 LINE L2 1169 1515 -1799 576 228 0 0 chr2 46454930 46455044 -204232810 + MER81 DNA DNA 1 114 0 1347 299 54 19 chr2 46455044 46455203 -204232651 + L2 LINE L2 1515 1714 -1600 1616 142 0 4 chr2 46455203 46455450 -204232404 + AluJb SINE Alu 54 299 -13 1347 299 54 19 chr2 46455450 46455517 -204232337 + L2 LINE L2 1714 1777 -1537 250 329 0 0 chr2 46455733 46455818 -204232036 + L2 LINE L2 3227 3311 -2 2241 85 13 6 chr2 46456289 46456606 -204231248 - L1PA8 LINE L1 0 6172 5854 1841 93 4 8 chr2 46461631 46461868 -204225986 - AluSx SINE Alu -70 242 7 356 236 120 41 chr2 46461876 46462143 -204225711 - L1MEc LINE L1 -2733 3482 3195 308 224 54 61 chr2 46462155 46462302 -204225552 - L1MEc LINE L1 -3660 2555 2410 371 284 95 60 chr2 46462304 46462621 -204225233 - L1MEc LINE L1 -3966 2430 2103 38 22 0 0 chr2 46462657 46462702 -204225152 + AT_rich Low_complexity Low_complexity 1 45 0 470 275 80 52 chr2 46462947 46463245 -204224609 - L1ME3 LINE L1 -205 5957 5644 1947 172 0 6 chr2 46463245 46463559 -204224295 + AluJb SINE Alu 1 312 0 470 275 80 52 chr2 46463559 46463660 -204224194 - L1ME3 LINE L1 -518 5644 5547 338 313 106 6 chr2 46463952 46464131 -204223723 + LTR67 LTR ERVL 359 555 -2 435 298 37 35 chr2 46464536 46464756 -204223098 - L1ME3A LINE L1 -11 6159 5934 856 300 94 29 chr2 46464790 46465399 -204222455 - L1ME3A LINE L1 -208 5962 5336 789 148 0 15 chr2 46465448 46465583 -204222271 + FLAM_C SINE Alu 11 143 0 232 263 112 60 chr2 46465591 46466206 -204221648 - L1ME3A LINE L1 -892 5254 4481 2029 148 0 3 chr2 46466532 46466830 -204221024 - AluSx SINE Alu -15 297 1 2055 146 0 3 chr2 46468148 46468443 -204219411 - AluJb SINE Alu -18 294 1 198 0 0 0 chr2 46468554 46468576 -204219278 + (TC)n Simple_repeat Simple_repeat 1 22 0 670 200 23 0 chr2 46469272 46469447 -204218407 + GA-rich Low_complexity Low_complexity 2 180 0 750 256 36 18 chr2 46469465 46469688 -204218166 - MIR SINE MIR -28 234 8 428 240 48 91 chr2 46469747 46469790 -204218064 - MLT1L LTR MaLR -12 603 560 2038 134 18 6 chr2 46469790 46470133 -204217721 + L1MB3 LINE L1 5830 6176 -7 428 240 48 91 chr2 46470133 46470297 -204217557 - MLT1L LTR MaLR -55 560 405 244 133 17 67 chr2 46470392 46470452 -204217402 + MLT1A1 LTR MaLR 1 57 -308 1322 149 58 42 chr2 46470459 46470559 -204217295 + AluJo SINE Alu 13 110 -202 1998 132 0 10 chr2 46470559 46470854 -204217000 - AluSx SINE Alu -20 292 1 1322 149 58 42 chr2 46470854 46470994 -204216860 + AluJo SINE Alu 110 257 -55 1331 140 215 0 chr2 46471025 46471290 -204216564 + MLT1A1 LTR MaLR 44 365 0 503 234 128 66 chr2 46471305 46471532 -204216322 - MLT1L LTR MaLR -336 279 39 324 0 0 0 chr2 46471890 46471926 -204215928 + (CA)n Simple_repeat Simple_repeat 2 37 0 183 365 24 0 chr2 46472006 46472091 -204215763 + MIR SINE MIR 76 162 -100 1047 33 8 0 chr2 46473301 46473453 -204214401 + L1PA3 LINE L1 6015 6167 0 183 343 0 0 chr2 46473728 46473801 -204214053 - MER5A DNA MER1_type -57 132 60 290 279 0 0 chr2 46474311 46474390 -204213464 + L2 LINE L2 3231 3309 -4 1589 151 0 41 chr2 46475130 46475401 -204212453 + AluJb SINE Alu 35 294 -18 1339 301 54 19 chr2 46476480 46476840 -204211014 + L2 LINE L2 1169 1515 -1799 576 228 0 0 chr2 46476840 46476954 -204210900 + MER81 DNA DNA 1 114 0 1339 301 54 19 chr2 46476954 46477113 -204210741 + L2 LINE L2 1515 1714 -1600 1616 142 0 4 chr2 46477113 46477360 -204210494 + AluJb SINE Alu 54 299 -13 1339 301 54 19 chr2 46477360 46477427 -204210427 + L2 LINE L2 1714 1777 -1537 250 329 0 0 chr2 46477643 46477728 -204210126 + L2 LINE L2 3227 3311 -2 2241 85 13 6 chr2 46478199 46478516 -204209338 - L1PA8 LINE L1 0 6172 5854 251 279 194 25 chr2 46483487 46483542 -204204312 - MIR SINE MIR 0 262 218 1909 70 0 8 chr2 46483542 46483785 -204204069 - AluY SINE Alu -70 241 1 251 279 194 25 chr2 46483785 46483930 -204203924 - MIR SINE MIR -44 218 28 199 337 31 37 chr2 46484399 46484562 -204203292 - MIR SINE MIR -100 162 1 324 0 0 0 chr2 46484564 46484600 -204203254 + (TG)n Simple_repeat Simple_repeat 2 37 0 503 234 128 66 chr2 46484958 46485185 -204202669 + MLT1L LTR MaLR 39 279 -336 1331 140 215 0 chr2 46485200 46485465 -204202389 - MLT1A1 LTR MaLR 0 365 44 1322 149 58 42 chr2 46485496 46485636 -204202218 - AluJo SINE Alu -55 257 110 1998 132 0 10 chr2 46485636 46485931 -204201923 + AluSx SINE Alu 1 292 -20 1322 149 58 42 chr2 46485931 46486031 -204201823 - AluJo SINE Alu -202 110 13 244 133 17 67 chr2 46486038 46486098 -204201756 - MLT1A1 LTR MaLR -308 57 1 428 240 48 91 chr2 46486193 46486357 -204201497 + MLT1L LTR MaLR 405 560 -55 2038 134 18 6 chr2 46486357 46486700 -204201154 - L1MB3 LINE L1 -7 6176 5830 428 240 48 91 chr2 46486700 46486743 -204201111 + MLT1L LTR MaLR 560 603 -12 750 256 36 18 chr2 46486802 46487025 -204200829 + MIR SINE MIR 8 234 -28 670 200 23 0 chr2 46487043 46487218 -204200636 + CT-rich Low_complexity Low_complexity 2 180 0 198 0 0 0 chr2 46487914 46487936 -204199918 + (GA)n Simple_repeat Simple_repeat 1 22 0 2055 146 0 3 chr2 46488047 46488342 -204199512 + AluJb SINE Alu 1 294 -18 2029 148 0 3 chr2 46489660 46489958 -204197896 + AluSx SINE Alu 1 297 -15 232 263 112 60 chr2 46490284 46490899 -204196955 + L1ME3A LINE L1 4481 5254 -892 789 148 0 15 chr2 46490907 46491042 -204196812 - FLAM_C SINE Alu 0 143 11 856 300 94 29 chr2 46491091 46491700 -204196154 + L1ME3A LINE L1 5336 5962 -208 435 298 37 35 chr2 46491734 46491954 -204195900 + L1ME3A LINE L1 5934 6159 -11 338 313 106 6 chr2 46492359 46492538 -204195316 - LTR67 LTR ERVL -2 555 359 470 275 80 52 chr2 46492830 46492931 -204194923 + L1ME3 LINE L1 5547 5644 -518 1947 172 0 6 chr2 46492931 46493245 -204194609 - AluJb SINE Alu 0 312 1 470 275 80 52 chr2 46493245 46493543 -204194311 + L1ME3 LINE L1 5644 5957 -205 38 22 0 0 chr2 46493788 46493833 -204194021 + AT_rich Low_complexity Low_complexity 1 45 0 371 284 95 60 chr2 46493869 46494186 -204193668 + L1ME3A LINE L1 2103 2430 -3966 308 224 54 61 chr2 46494188 46494335 -204193519 + L1ME3A LINE L1 2410 2555 -3660 899 263 152 53 chr2 46494347 46494622 -204193232 + L1ME3A LINE L1 3195 3442 -2773 2287 93 3 10 chr2 46494622 46494922 -204192932 + AluSx SINE Alu 7 304 -8 899 263 152 53 chr2 46494922 46495471 -204192383 + L1ME3A LINE L1 3442 4138 -2077 2169 116 0 16 chr2 46495471 46495774 -204192080 - AluSx SINE Alu -14 298 1 899 263 152 53 chr2 46495774 46495958 -204191896 + L1ME3A LINE L1 4138 4303 -1912 1291 113 0 6 chr2 46495958 46496135 -204191719 + AluSg/x SINE Alu 122 297 -15 222 37 0 0 chr2 46496298 46496325 -204191529 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1875 153 64 0 chr2 46496876 46497202 -204190652 + MER7A DNA MER2_type 2 346 0 1240 214 17 17 chr2 46497545 46497834 -204190020 + L1MB7 LINE L1 5887 6175 -9 597 274 27 34 chr2 46497890 46498182 -204189672 + L1ME3A LINE L1 4809 5098 -1117 * 6950 165 40 53 chr2 46498167 46499625 -204188229 + L1MC1 LINE L1 2 1441 -4985 2915 103 15 10 chr2 46499627 46500034 -204187820 + MSTA LTR MaLR 3 411 -17 11992 190 59 22 chr2 46500040 46501976 -204185878 + L1MC1 LINE L1 1437 3300 -3313 440 123 0 0 chr2 46501976 46502041 -204185813 + Alu SINE Alu 239 303 -9 11992 190 59 22 chr2 46502041 46503666 -204184188 + L1MC1 LINE L1 3300 4863 -1750 243 0 0 0 chr2 46503666 46503693 -204184161 + (TAA)n Simple_repeat Simple_repeat 1 27 0 11992 190 59 22 chr2 46503693 46505057 -204182797 + L1MC1 LINE L1 4863 6613 0 24 67 0 0 chr2 46505071 46505116 -204182738 + AT_rich Low_complexity Low_complexity 1 45 0 235 167 0 0 chr2 46505138 46505180 -204182674 - 5S rRNA rRNA -79 42 1 288 0 0 0 chr2 46505200 46505232 -204182622 + (CA)n Simple_repeat Simple_repeat 2 33 0 272 283 46 17 chr2 46505262 46505435 -204182419 + L1ME3A LINE L1 5191 5368 -847 1055 278 56 54 chr2 46505442 46506035 -204181819 + L1ME3A LINE L1 5416 6009 -230 1273 263 82 20 chr2 46506103 46506544 -204181310 - MLT1L LTR MaLR -2 613 146 414 0 0 0 chr2 46506940 46506986 -204180868 + (CA)n Simple_repeat Simple_repeat 1 46 0 186 43 0 0 chr2 46508505 46508528 -204179326 + (CA)n Simple_repeat Simple_repeat 2 24 0 201 292 22 11 chr2 46508865 46508954 -204178900 + L2 LINE L2 2972 3061 -211 246 32 0 0 chr2 46510708 46510739 -204177115 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 267 31 0 0 chr2 46510738 46510770 -204177084 + (TG)n Simple_repeat Simple_repeat 1 32 0 2090 131 3 10 chr2 46510927 46511233 -204176621 + AluJb SINE Alu 9 312 0 21 57 0 0 chr2 46511329 46511364 -204176490 + AT_rich Low_complexity Low_complexity 1 35 0 189 0 0 0 chr2 46511709 46511730 -204176124 + (TG)n Simple_repeat Simple_repeat 2 22 0 535 245 94 8 chr2 46512510 46512708 -204175146 + MIR SINE MIR 31 253 -9 2434 76 3 3 chr2 46512710 46513011 -204174843 - AluSp SINE Alu -12 301 1 213 167 0 42 chr2 46513693 46513741 -204174113 + T-rich Low_complexity Low_complexity 3 48 0 1901 153 3 19 chr2 46514080 46514387 -204173467 + AluJo SINE Alu 1 302 -10 2570 225 86 56 chr2 46514988 46515927 -204171927 + HAL1 LINE L1 1536 2502 -5 426 197 237 0 chr2 46517235 46517387 -204170467 + MIR SINE MIR 4 191 -71 288 305 50 21 chr2 46518620 46518761 -204169093 + MIR SINE MIR 83 227 -35 23 0 0 0 chr2 46519767 46519790 -204168064 + AT_rich Low_complexity Low_complexity 1 23 0 670 252 68 13 chr2 46521243 46521477 -204166377 + MIR SINE MIR 12 258 -4 658 226 29 54 chr2 46522105 46522309 -204165545 - MIR SINE MIR -16 246 48 204 287 58 35 chr2 46523025 46523112 -204164742 - MIR3 SINE MIR -1 207 119 190 227 30 61 chr2 46523129 46523195 -204164659 + L2 LINE L2 3232 3295 -18 247 306 5 29 chr2 46523798 46523930 -204163924 + CT-rich Low_complexity Low_complexity 1 128 0 362 325 38 0 chr2 46524553 46524710 -204163144 - MIR SINE MIR 0 262 100 336 339 29 12 chr2 46526226 46526397 -204161457 + MER117 DNA MER1_type 1 174 -23 257 232 29 0 chr2 46526405 46526474 -204161380 + L2 LINE L2 2991 3061 -211 669 291 19 34 chr2 46526474 46526739 -204161115 + MIR SINE MIR 2 262 0 274 190 165 13 chr2 46526847 46526926 -204160928 + L2 LINE L2 3182 3272 0 220 326 0 12 chr2 46527107 46527193 -204160661 + GA-rich Low_complexity Low_complexity 1 85 0 399 321 80 5 chr2 46527414 46527626 -204160228 + MIR SINE MIR 32 259 -3 296 250 26 83 chr2 46528004 46528160 -204159694 + MIR SINE MIR 26 172 -90 1331 222 103 21 chr2 46529056 46529443 -204158411 - L1ME3 LINE L1 -129 6033 5605 307 219 0 14 chr2 46530284 46530357 -204157497 - MIR SINE MIR -114 148 77 1255 100 7 7 chr2 46530357 46530621 -204157233 - THE1C LTR MaLR 0 364 3 10453 94 25 61 chr2 46530623 46532262 -204155592 - THE1C-int LTR MaLR 0 1580 1 2838 94 3 0 chr2 46532262 46532636 -204155218 - THE1C LTR MaLR 0 375 1 368 226 24 12 chr2 46532825 46532909 -204154945 - MIR SINE MIR -173 89 5 2069 111 7 39 chr2 46533890 46534196 -204153658 + AluSq SINE Alu 3 298 -15 214 282 14 0 chr2 46534295 46534366 -204153488 + (TATTG)n Simple_repeat Simple_repeat 2 73 0 499 279 80 70 chr2 46534741 46535077 -204152777 - MLT1L LTR MaLR -19 570 229 595 262 162 9 chr2 46535088 46535298 -204152556 + MIR SINE MIR 21 262 0 2339 91 3 0 chr2 46535464 46535761 -204152093 - AluY SINE Alu -12 299 2 368 306 41 0 chr2 46536389 46536510 -204151344 - MIR SINE MIR -31 231 106 2097 99 7 11 chr2 46537335 46537660 -204150194 + AluSx SINE Alu 1 324 0 254 200 56 56 chr2 46537700 46537790 -204150064 + MLT1L LTR MaLR 526 615 0 2104 104 4 0 chr2 46537944 46538222 -204149632 + AluSx SINE Alu 33 311 -1 1248 128 52 28 chr2 46541927 46542138 -204145716 - MER51A LTR ERV1 0 634 419 824 193 71 14 chr2 46542134 46542346 -204145508 - MER51A LTR ERV1 -410 224 1 * 430 231 0 0 chr2 46542787 46542865 -204144989 + MER81 DNA DNA 1 78 -36 676 283 0 0 chr2 46543007 46543180 -204144674 + MER5B DNA MER1_type 6 178 0 2334 79 13 10 chr2 46543314 46543617 -204144237 - AluY SINE Alu -7 304 1 201 195 0 0 chr2 46544166 46544207 -204143647 + MIR SINE MIR 95 135 -127 2343 103 0 0 chr2 46544694 46544995 -204142859 + AluSx SINE Alu 1 301 -11 1948 171 0 0 chr2 46545466 46545765 -204142089 + AluJb SINE Alu 1 299 -13 230 81 27 0 chr2 46545784 46545821 -204142033 + (GAAAA)n Simple_repeat Simple_repeat 4 41 0 316 162 203 0 chr2 46545839 46545913 -204141941 + L2 LINE L2 3217 3305 -8 180 182 0 0 chr2 46546018 46546051 -204141803 + MIR SINE MIR 112 144 -118 2097 125 0 29 chr2 46546657 46546968 -204140886 - AluSx SINE Alu -10 302 1 218 259 140 25 chr2 46547055 46547220 -204140634 - MIR SINE MIR -62 200 21 2056 96 0 0 chr2 46547629 46547890 -204139964 + AluSg SINE Alu 37 297 -13 293 339 126 0 chr2 46547893 46548020 -204139834 - MIR SINE MIR -56 206 64 * 404 315 36 52 chr2 46548017 46548272 -204139582 + L1MEc LINE L1 91 341 -5778 1727 175 0 4 chr2 46548273 46548553 -204139301 + AluJo SINE Alu 1 278 -34 2182 112 0 3 chr2 46548554 46548859 -204138995 + AluSq SINE Alu 1 304 -9 35 0 0 0 chr2 46548868 46548903 -204138951 + AT_rich Low_complexity Low_complexity 1 35 0 1185 252 67 118 chr2 46548903 46549438 -204138416 + L1MEc LINE L1 329 878 -5241 541 92 26 0 chr2 46549438 46549514 -204138340 + BC200 scRNA scRNA 2 79 -121 1185 252 67 118 chr2 46549514 46549820 -204138034 + L1MEc LINE L1 878 1198 -4921 1974 149 155 13 chr2 46550185 46550560 -204137294 - MSTA LTR MaLR 0 428 1 529 269 106 57 chr2 46550726 46550799 -204137055 + L1MEc LINE L1 1321 1389 -1149 1980 146 0 0 chr2 46550799 46551093 -204136761 + AluSx SINE Alu 1 294 -18 529 269 106 57 chr2 46551093 46551330 -204136524 + L1MEc LINE L1 1389 1638 -900 352 222 94 8 chr2 46551305 46551422 -204136432 + L1MEc LINE L1 2889 3015 -3114 * 223 279 0 58 chr2 46552095 46552181 -204135673 + MIR SINE MIR 48 128 -80 1836 140 3 22 chr2 46552258 46552573 -204135281 + AluSx SINE Alu 3 311 -1 495 337 12 6 chr2 46552861 46553033 -204134821 + MER5B DNA MER1_type 2 174 -4 492 304 143 0 chr2 46553318 46553535 -204134319 - MIR SINE MIR -6 256 9 409 186 0 93 chr2 46554191 46554236 -204133618 - MIR3 SINE MIR -11 197 164 1064 143 80 0 chr2 46554236 46554411 -204133443 + MER5A DNA MER1_type 1 189 0 409 186 0 93 chr2 46554411 46554462 -204133392 - MIR3 SINE MIR -44 164 110 * 431 246 51 25 chr2 46554460 46554578 -204133276 + L2 LINE L2 3193 3313 0 485 92 13 0 chr2 46555077 46555153 -204132701 + (GA)n Simple_repeat Simple_repeat 1 77 0 1040 250 104 25 chr2 46555918 46556322 -204131532 - L2 LINE L2 -5 3308 2873 190 238 13 119 chr2 46556333 46556484 -204131370 - L2 LINE L2 -1477 1837 1703 2094 114 7 0 chr2 46556515 46556812 -204131042 - AluSp SINE Alu -14 299 1 1769 305 209 22 chr2 46557098 46558183 -204129671 + L2 LINE L2 102 1476 -1838 2278 98 3 0 chr2 46558183 46558488 -204129366 + AluSx SINE Alu 1 306 -6 1769 305 209 22 chr2 46558488 46558714 -204129140 + L2 LINE L2 1476 1658 -1656 851 238 52 24 chr2 46558736 46558946 -204128908 - MER58A DNA MER1_type 0 224 9 1403 155 4 4 chr2 46559017 46559249 -204128605 + AluJo SINE Alu 1 232 -80 379 118 24 0 chr2 46559613 46559698 -204128156 + (TG)n Simple_repeat Simple_repeat 1 87 0 1174 163 47 1 chr2 46560814 46561132 -204126722 - MLT1A1 LTR MaLR 0 365 2 216 97 0 0 chr2 46561476 46561507 -204126347 + (T)n Simple_repeat Simple_repeat 1 31 0 234 0 0 0 chr2 46561701 46561727 -204126127 + (TAA)n Simple_repeat Simple_repeat 2 27 0 237 65 0 0 chr2 46563037 46563068 -204124786 + (CACG)n Simple_repeat Simple_repeat 1 31 0 229 330 0 11 chr2 46573422 46573513 -204114341 + GA-rich Low_complexity Low_complexity 2 91 0 219 184 0 20 chr2 46573967 46574016 -204113838 + (CCCTA)n Simple_repeat Simple_repeat 3 50 0 252 231 0 31 chr2 46578658 46578723 -204109131 + C-rich Low_complexity Low_complexity 4 66 0 228 221 44 0 chr2 46580635 46580703 -204107151 + GA-rich Low_complexity Low_complexity 2 72 0 221 0 0 33 chr2 46581015 46581045 -204106809 + (TCTCCC)n Simple_repeat Simple_repeat 3 31 0 223 192 19 0 chr2 46581099 46581151 -204106703 + (TG)n Simple_repeat Simple_repeat 2 54 0 426 242 0 0 chr2 46581163 46581287 -204106567 + CT-rich Low_complexity Low_complexity 3 126 0 333 212 0 0 chr2 46581411 46581524 -204106330 + (CGG)n Simple_repeat Simple_repeat 3 115 0 210 284 49 0 chr2 46582860 46582941 -204104913 + GA-rich Low_complexity Low_complexity 1 85 0 389 159 0 23 chr2 46583982 46584070 -204103784 + CT-rich Low_complexity Low_complexity 1 86 0 225 0 0 0 chr2 46584519 46584544 -204103310 + (A)n Simple_repeat Simple_repeat 1 25 0 246 192 0 0 chr2 46584615 46584667 -204103187 + CT-rich Low_complexity Low_complexity 2 53 0 22 35 0 0 chr2 46584824 46584853 -204103001 + AT_rich Low_complexity Low_complexity 1 29 0 218 136 23 0 chr2 46584939 46584983 -204102871 + CT-rich Low_complexity Low_complexity 1 45 0 360 0 0 0 chr2 46589355 46589395 -204098459 + (CA)n Simple_repeat Simple_repeat 2 41 0 408 20 0 0 chr2 46590057 46590106 -204097748 + (CA)n Simple_repeat Simple_repeat 1 49 0 222 279 12 41 chr2 46590296 46590398 -204097456 + GA-rich Low_complexity Low_complexity 1 99 0 261 0 0 0 chr2 46590779 46590808 -204097046 + (CA)n Simple_repeat Simple_repeat 1 29 0 25 0 0 0 chr2 46591214 46591239 -204096615 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr2 46591377 46591412 -204096442 + GC_rich Low_complexity Low_complexity 1 35 0 188 224 20 0 chr2 46592031 46592080 -204095774 - MIR SINE MIR -135 127 78 2101 89 0 0 chr2 46593148 46593468 -204094386 + AluSc SINE Alu 1 320 0 189 339 63 16 chr2 46595452 46595579 -204092275 - L2 LINE L2 -10 3303 3171 253 345 21 7 chr2 46595625 46595767 -204092087 - L2 LINE L2 -236 3036 2893 183 367 86 16 chr2 46595853 46595981 -204091873 - MIR3 SINE MIR -5 203 67 934 205 75 30 chr2 46596214 46596482 -204091372 + MER46C DNA MER2_type 58 337 -1 1970 148 0 0 chr2 46596692 46596990 -204090864 - AluJb SINE Alu -14 298 1 225 291 54 54 chr2 46597286 46597434 -204090420 - MIR SINE MIR -10 252 105 1867 120 0 78 chr2 46597814 46598148 -204089706 - AluSx SINE Alu -4 308 1 2246 85 0 11 chr2 46598665 46598947 -204088907 + AluSc SINE Alu 2 280 -29 217 0 0 0 chr2 46598947 46598971 -204088883 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2289 114 0 3 chr2 46599698 46600004 -204087850 + AluSx SINE Alu 1 305 -7 217 244 0 0 chr2 46601048 46601089 -204086765 + MER5A DNA MER1_type 29 69 -120 1640 118 40 0 chr2 46601094 46601322 -204086532 + AluSg/x SINE Alu 73 309 -1 191 315 0 14 chr2 46601428 46601501 -204086353 + MIR SINE MIR 84 155 -107 904 9 35 0 chr2 46602765 46602880 -204084974 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 1970 153 3 0 chr2 46602882 46603164 -204084690 - AluSx SINE Alu -29 283 1 268 274 8 60 chr2 46603530 46603605 -204084249 + CT-rich Low_complexity Low_complexity 3 71 -42 2182 122 0 32 chr2 46603605 46603916 -204083938 - AluSx SINE Alu -9 303 3 268 274 8 60 chr2 46603916 46603957 -204083897 + CT-rich Low_complexity Low_complexity 71 113 0 386 293 77 68 chr2 46606414 46606665 -204081189 - MIR SINE MIR -8 254 2 216 0 0 0 chr2 46606841 46606865 -204080989 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1602 185 3 23 chr2 46607789 46608091 -204079763 + AluJo SINE Alu 2 297 -15 782 288 123 30 chr2 46608324 46608525 -204079329 - L2 LINE L2 -8 3305 3124 207 0 0 0 chr2 46608525 46608548 -204079306 + (GGGTG)n Simple_repeat Simple_repeat 4 26 0 782 288 123 30 chr2 46608548 46608746 -204079108 - L2 LINE L2 -189 3124 2869 976 240 54 59 chr2 46608855 46609280 -204078574 - L2 LINE L2 -878 2436 2014 1548 156 63 66 chr2 46609383 46609684 -204078170 - AluJb SINE Alu -12 300 1 636 84 0 0 chr2 46610991 46611074 -204076780 + AluSc SINE Alu 2 84 -225 2358 58 0 82 chr2 46611074 46611404 -204076450 + AluY SINE Alu 1 303 -8 1725 85 0 42 chr2 46611404 46611638 -204076216 + AluSc SINE Alu 71 296 -13 367 305 70 0 chr2 46612190 46612318 -204075536 - L3 LINE CR1 -108 1469 1333 501 172 90 33 chr2 46612931 46613053 -204074801 - MSTD LTR MaLR 0 396 268 488 287 135 35 chr2 46613216 46613564 -204074290 - L3 LINE CR1 0 1577 1195 2310 103 3 3 chr2 46613825 46614169 -204073685 - AluSx SINE Alu 0 344 1 1630 173 118 0 chr2 46614171 46614477 -204073377 + MLT1A1 LTR MaLR 24 365 0 274 167 0 0 chr2 46614507 46614555 -204073299 - MIR SINE MIR -112 150 103 324 0 0 0 chr2 46614618 46614654 -204073200 + (CAG)n Simple_repeat Simple_repeat 2 37 0 563 258 77 22 chr2 46615625 46615807 -204072047 + MIR SINE MIR 71 262 0 2329 110 0 10 chr2 46615894 46616202 -204071652 + AluSx SINE Alu 1 305 -7 211 226 0 0 chr2 46616820 46616871 -204070983 - MIR SINE MIR -87 121 70 335 333 97 0 chr2 46617514 46617628 -204070226 - MIR SINE MIR -118 144 20 338 0 24 0 chr2 46617754 46617796 -204070058 + (CA)n Simple_repeat Simple_repeat 2 44 0 1765 184 0 0 chr2 46617917 46618231 -204069623 + AluJb SINE Alu 1 314 0 2224 110 10 7 chr2 46618371 46618535 -204069319 - AluSx SINE Alu -10 302 135 2292 95 0 16 chr2 46618535 46618839 -204069015 - AluSq SINE Alu -14 299 1 2224 110 10 7 chr2 46618839 46618975 -204068879 - AluSx SINE Alu -177 135 1 321 208 0 0 chr2 46619253 46619325 -204068529 + C-rich Low_complexity Low_complexity 1 72 0 1602 206 80 5 chr2 46619331 46619733 -204068121 - Charlie4a DNA MER1_type -68 440 9 1003 174 11 16 chr2 46619780 46619970 -204067884 + MER5A DNA MER1_type 1 189 0 911 191 11 17 chr2 46621342 46621520 -204066334 - MER5A DNA MER1_type -12 177 1 261 0 0 0 chr2 46621698 46621709 -204066145 + (TG)n Simple_repeat Simple_repeat 1 40 0 261 0 0 0 chr2 46621709 46621738 -204066116 + (TG)n Simple_repeat Simple_repeat 2 30 0 2227 123 0 0 chr2 46621757 46622057 -204065797 - AluSx SINE Alu -12 300 1 220 243 243 0 chr2 46622118 46622192 -204065662 - L3 LINE CR1 -7 1570 1479 215 296 111 12 chr2 46622274 46622355 -204065499 - MIR SINE MIR -153 109 21 2521 96 0 0 chr2 46622402 46622714 -204065140 - AluSx SINE Alu 0 312 1 1591 231 103 83 chr2 46622821 46622880 -204064974 - MLT1H1 LTR MaLR -3 552 496 1607 199 30 7 chr2 46622880 46623181 -204064673 + AluJb SINE Alu 1 308 -4 1591 231 103 83 chr2 46623181 46623653 -204064201 - MLT1H1 LTR MaLR -59 496 10 1273 306 69 18 chr2 46623793 46624355 -204063499 + Charlie7 DNA MER1_type 37 627 -1985 247 144 261 32 chr2 46624386 46624574 -204063280 + Charlie7 DNA MER1_type 2382 2612 0 2328 117 0 0 chr2 46624724 46625032 -204062822 + AluSx SINE Alu 1 308 -4 2444 79 0 0 chr2 46625114 46625405 -204062449 + AluY SINE Alu 7 297 -14 189 308 65 37 chr2 46625640 46625747 -204062107 + L2 LINE L2 3196 3305 -8 1737 267 46 6 chr2 46626590 46627066 -204060788 - MLT1J LTR MaLR -6 505 11 2475 132 41 12 chr2 46627201 46627617 -204060237 - MSTA LTR MaLR 0 428 1 2280 125 3 0 chr2 46627937 46628249 -204059605 - AluSq SINE Alu 0 313 1 503 263 103 82 chr2 46628694 46629273 -204058581 - MLT1L LTR MaLR -2 613 36 1494 199 50 13 chr2 46629549 46629850 -204058004 + AluJb SINE Alu 1 312 0 363 241 17 52 chr2 46630168 46630342 -204057512 + CT-rich Low_complexity Low_complexity 3 170 0 339 287 21 11 chr2 46630459 46630553 -204057301 + MIR3 SINE MIR 73 167 -41 3190 184 16 21 chr2 46630854 46631582 -204056272 - L1M4c LINE L1 -4706 1940 1216 668 153 99 15 chr2 46631588 46631719 -204056135 - FLAM_C SINE Alu 0 143 2 4754 205 81 22 chr2 46631720 46632888 -204054966 - L1M4c LINE L1 -5303 1239 3 307 279 63 18 chr2 46633163 46633274 -204054580 - MIR SINE MIR -75 133 18 906 298 18 57 chr2 46633774 46634163 -204053691 - MLT1J1 LTR MaLR -21 425 52 441 276 143 36 chr2 46634729 46635126 -204052728 + MLT1J LTR MaLR 35 510 -1 475 186 25 59 chr2 46635416 46635534 -204052320 + MLT1J2 LTR MaLR 30 143 -307 374 261 168 25 chr2 46636133 46636294 -204051560 + MLT1J2 LTR MaLR 241 424 -26 2361 102 3 10 chr2 46636751 46637065 -204050789 + AluSx SINE Alu 1 312 0 224 279 58 74 chr2 46637583 46637773 -204050081 + MIR SINE MIR 76 262 0 310 301 140 5 chr2 46638978 46639164 -204048690 + MIR SINE MIR 48 258 -4 1503 147 38 8 chr2 46639167 46639405 -204048449 + AluJo SINE Alu 3 247 -65 40 0 0 0 chr2 46641809 46641849 -204046005 + AT_rich Low_complexity Low_complexity 1 40 0 182 280 0 0 chr2 46642448 46642498 -204045356 + L2 LINE L2 3220 3269 -3 222 220 0 20 chr2 46643630 46643680 -204044174 + GA-rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr2 46643680 46643702 -204044152 + GC_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr2 46644319 46644360 -204043494 + AT_rich Low_complexity Low_complexity 1 41 0 211 161 36 0 chr2 46644810 46644866 -204042988 + GA-rich Low_complexity Low_complexity 1 58 0 194 170 0 21 chr2 46644926 46644973 -204042881 + GA-rich Low_complexity Low_complexity 2 47 0 24 53 0 0 chr2 46648247 46648285 -204039569 + GC_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 46648723 46648751 -204039103 + GC_rich Low_complexity Low_complexity 1 28 0 299 331 0 33 chr2 46648888 46649039 -204038815 + G-rich Low_complexity Low_complexity 1 146 0 195 306 130 28 chr2 46650143 46650251 -204037603 + MIR SINE MIR 24 142 -66 182 235 209 59 chr2 46650762 46650915 -204036939 + MIR3 SINE MIR 11 186 -22 302 252 202 25 chr2 46654779 46654898 -204032956 + MIR SINE MIR 8 147 -115 251 204 0 37 chr2 46654903 46654957 -204032897 + L2 LINE L2 3258 3309 -4 437 273 22 29 chr2 46655305 46655444 -204032410 + MIR SINE MIR 20 157 -105 2055 142 24 0 chr2 46655453 46655749 -204032105 + AluSx SINE Alu 1 303 -9 546 228 139 19 chr2 46656240 46656398 -204031456 - MIR SINE MIR -84 178 2 1010 279 71 31 chr2 46656581 46657157 -204030697 - L1ME3A LINE L1 -219 5951 5353 288 140 35 0 chr2 46657833 46657890 -204029964 + FRAM SINE Alu 34 92 -74 330 175 88 0 chr2 46658122 46658202 -204029652 + L1ME4a LINE L1 5759 5845 -276 613 292 12 0 chr2 46658301 46658469 -204029385 - MIR SINE MIR -13 249 80 1369 196 13 0 chr2 46659067 46659302 -204028552 - MER8 DNA MER2_type 0 239 2 315 150 0 0 chr2 46659345 46659405 -204028449 + (TG)n Simple_repeat Simple_repeat 2 61 0 948 217 65 62 chr2 46659537 46659874 -204027980 + MLT1A1 LTR MaLR 28 365 0 270 255 43 53 chr2 46660130 46660224 -204027630 - L2 LINE L2 -22 3291 3199 519 255 87 7 chr2 46660766 46660915 -204026939 - MIR SINE MIR -94 168 8 252 318 54 86 chr2 46661903 46662183 -204025671 + L2 LINE L2 2636 2906 -408 465 285 104 67 chr2 46662246 46662544 -204025310 + MLT1I LTR MaLR 75 383 -26 309 265 36 128 chr2 46662594 46662843 -204025011 + L2 LINE L2 2976 3201 -71 1900 216 113 78 chr2 46662918 46662997 -204024857 + MLT1G1 LTR MaLR 1 76 -519 2143 150 0 6 chr2 46662997 46663311 -204024543 - AluSx SINE Alu 0 312 1 1900 216 113 78 chr2 46663311 46663805 -204024049 + MLT1G1 LTR MaLR 76 594 -1 1019 139 0 26 chr2 46664213 46664364 -204023490 - FRAM SINE Alu -5 171 25 237 304 12 31 chr2 46664401 46664562 -204023292 + (CATATA)n Simple_repeat Simple_repeat 1 158 0 2426 104 0 0 chr2 46664734 46665042 -204022812 + AluSc SINE Alu 1 308 -1 291 316 0 20 chr2 46665731 46665829 -204022025 + L2 LINE L2 3143 3238 -34 * 518 349 90 17 chr2 46665825 46666126 -204021728 + L2 LINE L2 2633 2955 -359 746 270 31 10 chr2 46666144 46666340 -204021514 + L2 LINE L2 3114 3313 0 351 317 165 30 chr2 46667279 46667509 -204020345 - MIR SINE MIR 0 262 2 220 267 67 0 chr2 46668243 46668303 -204019551 + MIR SINE MIR 82 145 -117 278 298 61 69 chr2 46668796 46668927 -204018927 - L2 LINE L2 -20 3252 3123 441 249 106 51 chr2 46669337 46669574 -204018280 + L2 LINE L2 3060 3309 -4 314 318 91 26 chr2 46669759 46669913 -204017941 + MIR3 SINE MIR 42 205 -3 1909 169 3 0 chr2 46669969 46670276 -204017578 + AluJb SINE Alu 4 311 -1 2329 112 0 3 chr2 46671102 46671414 -204016440 - AluSx SINE Alu -1 311 1 234 317 172 14 chr2 46671428 46671573 -204016281 - MIR3 SINE MIR -21 187 20 802 249 79 63 chr2 46671697 46672147 -204015707 + MLT1G LTR MaLR 1 436 -106 39 22 0 0 chr2 46672170 46672216 -204015638 + AT_rich Low_complexity Low_complexity 1 46 0 1765 142 10 53 chr2 46672216 46672518 -204015336 - AluJo SINE Alu -23 289 1 295 117 138 0 chr2 46672527 46672589 -204015265 + MLT1G1 LTR MaLR 478 594 -1 838 155 39 17 chr2 46673538 46673719 -204014135 + MER53 DNA DNA 2 186 -3 309 297 94 23 chr2 46673812 46673940 -204013914 - MIR3 SINE MIR -48 160 24 209 325 0 49 chr2 46673925 46674048 -204013806 + L2 LINE L2 3008 3124 -189 * 507 185 31 0 chr2 46674048 46674178 -204013676 + CT-rich Low_complexity Low_complexity 1 134 0 365 287 39 23 chr2 46674178 46674307 -204013547 + L2 LINE L2 3182 3312 -1 1664 169 48 14 chr2 46675027 46675317 -204012537 + AluJo SINE Alu 1 300 -12 528 311 24 18 chr2 46675357 46675524 -204012330 - MIR SINE MIR -14 248 81 231 105 0 70 chr2 46676203 46676260 -204011594 + (CCCCAG)n Simple_repeat Simple_repeat 6 58 0 308 250 11 54 chr2 46676629 46676721 -204011133 + MIR SINE MIR 59 146 -116 1047 253 31 26 chr2 46676724 46677074 -204010780 + MLT1G LTR MaLR 2 372 -223 1494 149 122 75 chr2 46677842 46678270 -204009584 - LTR7 LTR ERV1 -2 448 1 2325 91 59 13 chr2 46678270 46678645 -204009209 - HERVH LTR ERV1 0 7713 7322 1336 124 18 5 chr2 46678643 46678860 -204008994 - HERVH LTR ERV1 -1894 5819 5600 * 3976 149 24 8 chr2 46678852 46679510 -204008344 - HERVH LTR ERV1 -2557 5156 4488 3197 116 6 6 chr2 46679512 46680014 -204007840 - HERVH LTR ERV1 -3720 3993 3492 827 149 20 0 chr2 46680004 46680152 -204007702 - HERVH LTR ERV1 -4423 3290 3140 * 19368 110 9 10 chr2 46680146 46683138 -204004716 - HERVH LTR ERV1 -4726 2987 1 1514 145 168 30 chr2 46683140 46683534 -204004320 - LTR7 LTR ERV1 -2 448 1 507 269 143 0 chr2 46683899 46684074 -204003780 + MIR SINE MIR 3 202 -60 225 0 0 0 chr2 46684098 46684123 -204003731 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1817 185 0 16 chr2 46684908 46685222 -204002632 - AluJo SINE Alu -3 309 1 222 374 65 9 chr2 46685791 46685898 -204001956 - MIR SINE MIR -79 129 17 524 155 6 17 chr2 46686967 46687128 -204000726 + CT-rich Low_complexity Low_complexity 1 159 0 476 191 0 22 chr2 46687142 46687231 -204000623 - AluJo SINE Alu -103 209 123 281 195 0 13 chr2 46688912 46688989 -203998865 + CT-rich Low_complexity Low_complexity 4 79 0 470 258 57 0 chr2 46689092 46689216 -203998638 - MIR SINE MIR -8 254 124 1600 197 35 37 chr2 46689269 46689644 -203998210 - MLT1A2 LTR MaLR 0 374 1 238 308 13 0 chr2 46689911 46689989 -203997865 + MIR SINE MIR 47 125 -137 1362 144 79 25 chr2 46690379 46690656 -203997198 + L1MB7 LINE L1 5874 6165 -19 185 236 0 53 chr2 46691976 46692104 -203995750 - MER5A DNA MER1_type 0 189 11 257 346 44 44 chr2 46692238 46692420 -203995434 + L2 LINE L2 2880 3061 -211 405 308 77 28 chr2 46692592 46692735 -203995119 + MIR3 SINE MIR 55 204 -4 217 211 0 0 chr2 46693062 46693100 -203994754 + G-rich Low_complexity Low_complexity 2 39 0 411 299 169 0 chr2 46693750 46693927 -203993927 + MIR SINE MIR 5 211 -51 212 255 21 0 chr2 46694536 46694583 -203993271 + MIR3 SINE MIR 122 169 -39 1538 53 5 0 chr2 46694670 46694858 -203992996 - L1PA8 LINE L1 -5 6167 5979 516 239 57 91 chr2 46695183 46695347 -203992507 - MIR SINE MIR -2 260 103 2163 134 0 3 chr2 46695347 46695639 -203992215 + AluSx SINE Alu 1 291 -21 516 239 57 91 chr2 46695639 46695683 -203992171 - MIR SINE MIR -159 103 59 2683 126 106 0 chr2 46695775 46696129 -203991725 - L1PA16 LINE L1 0 6166 5752 309 51 0 0 chr2 46696129 46696168 -203991686 + (CA)n Simple_repeat Simple_repeat 1 39 0 2683 126 106 0 chr2 46696168 46696264 -203991590 - L1PA16 LINE L1 -414 5752 5668 852 236 84 73 chr2 46697667 46698228 -203989626 + L2 LINE L2 2681 3241 -72 324 304 148 2 chr2 46698243 46698393 -203989461 + MIR3 SINE MIR 4 183 -25 474 286 103 16 chr2 46749585 46749770 -203938084 - MLT1K LTR MaLR -17 571 371 818 238 58 54 chr2 46749818 46750182 -203937672 - MER115 DNA AcHobo -280 413 2 2338 65 54 0 chr2 46750911 46751205 -203936649 - AluY SINE Alu -1 310 1 340 317 7 28 chr2 46752457 46752599 -203935255 - L2 LINE L2 0 3272 3134 2232 118 0 13 chr2 46752616 46752921 -203934933 - AluSx SINE Alu -11 301 1 280 245 7 77 chr2 46753564 46753694 -203934160 - MIR SINE MIR -65 143 20 1667 192 29 6 chr2 46754028 46754340 -203933514 - MER58B DNA MER1_type -2 339 21 384 152 0 0 chr2 46754441 46754507 -203933347 + T-rich Low_complexity Low_complexity 1 66 0 401 266 86 0 chr2 46756763 46756902 -203930952 - MIR3 SINE MIR -6 202 52 2133 139 6 29 chr2 46757795 46758141 -203929713 - MER2 DNA MER2_type -2 343 6 1597 221 82 16 chr2 46758744 46758847 -203929007 - Charlie4a DNA MER1_type -1455 506 411 2352 100 0 13 chr2 46758847 46759156 -203928698 + AluSx SINE Alu 1 305 -7 1597 221 82 16 chr2 46759156 46759491 -203928363 - Charlie4a DNA MER1_type -1550 411 39 2422 207 52 51 chr2 46760076 46760988 -203926866 + L1ME3 LINE L1 5131 6038 -124 914 233 105 24 chr2 46761129 46761473 -203926381 + L1ME LINE L1 5191 5613 -549 234 0 0 0 chr2 46761624 46761650 -203926204 + (T)n Simple_repeat Simple_repeat 1 26 0 1037 122 5 102 chr2 46761935 46762131 -203925723 - AluJb SINE Alu 0 312 136 2185 104 7 23 chr2 46762232 46762566 -203925288 + AluSg SINE Alu 1 329 0 198 300 138 0 chr2 46762566 46762646 -203925208 + MIR SINE MIR 117 207 -55 393 225 8 62 chr2 46762712 46762841 -203925013 + L2 LINE L2 3192 3313 0 559 169 55 164 chr2 46763688 46763871 -203923983 - AluSg/x SINE Alu -13 299 137 464 319 100 17 chr2 46764209 46764450 -203923404 + MIR SINE MIR 2 262 0 312 118 44 0 chr2 46767442 46767510 -203920344 + (TA)n Simple_repeat Simple_repeat 1 71 0 2364 85 0 0 chr2 46767522 46767828 -203920026 - AluY SINE Alu 0 306 1 2272 92 0 3 chr2 46768874 46769157 -203918697 - AluSg SINE Alu -28 282 1 443 153 0 0 chr2 46769157 46769229 -203918625 + MSTA LTR MaLR 357 428 0 679 90 0 0 chr2 46769230 46769319 -203918535 + L1MB1 LINE L1 5624 5712 -456 1000 159 6 31 chr2 46769319 46769482 -203918372 - MER1B DNA MER1_type -124 173 15 2225 141 50 21 chr2 46769482 46769901 -203917953 + L1MB1 LINE L1 5736 6166 -2 263 262 0 0 chr2 46770849 46770910 -203916944 + MIR SINE MIR 39 99 -109 437 248 69 14 chr2 46771190 46771335 -203916519 + MIR SINE MIR 108 260 -2 225 0 0 0 chr2 46772281 46772306 -203915548 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 388 300 0 0 chr2 46773062 46773162 -203914692 + MIR3 SINE MIR 109 208 0 424 298 115 5 chr2 46773249 46773467 -203914387 - MIR SINE MIR 0 262 21 2005 147 43 100 chr2 46773529 46773998 -203913856 + L1MB4 LINE L1 5715 6156 -24 2064 113 0 7 chr2 46774015 46774306 -203913548 + AluSp SINE Alu 1 289 -24 22 35 0 0 chr2 46774309 46774338 -203913516 + AT_rich Low_complexity Low_complexity 1 29 0 213 361 55 25 chr2 46774343 46774545 -203913309 - MIR SINE MIR -12 250 43 3161 106 82 0 chr2 46775150 46775623 -203912231 - MER75 DNA T2_type -2 512 1 577 306 65 16 chr2 46776058 46776306 -203911548 + MIR SINE MIR 2 261 -1 4704 159 27 26 chr2 46776575 46777410 -203910444 - L1MB8 LINE L1 -1 6177 5330 1960 137 13 33 chr2 46777410 46777716 -203910138 - AluJb SINE Alu -12 300 1 4704 159 27 26 chr2 46777716 46777900 -203909954 - L1MB8 LINE L1 -848 5330 5148 296 276 57 53 chr2 46777929 46778193 -203909661 + L1 LINE L1 4181 4445 -1701 22 0 0 0 chr2 46780694 46780716 -203907138 + GC_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 46781854 46781877 -203905977 + AT_rich Low_complexity Low_complexity 1 23 0 1030 188 135 64 chr2 46783766 46784100 -203903754 + L1ME3A LINE L1 5797 6161 -9 252 346 83 30 chr2 46786300 46786433 -203901421 + MIR SINE MIR 93 232 -30 2053 124 21 0 chr2 46788546 46788836 -203899018 - AluSg SINE Alu -14 296 1 562 251 127 42 chr2 46789821 46790152 -203897702 - MLT1H1 LTR MaLR 0 555 197 1943 132 0 4 chr2 46790182 46790448 -203897406 + AluSq SINE Alu 1 265 -48 218 152 109 0 chr2 46790895 46790941 -203896913 - L2 LINE L2 -68 3245 3195 483 289 76 40 chr2 46790972 46791197 -203896657 - MIR SINE MIR 0 262 30 2143 181 8 55 chr2 46791413 46791905 -203895949 + Charlie1b DNA MER1_type 55 523 0 725 101 11 58 chr2 46794195 46794383 -203893471 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 595 190 23 11 chr2 46794344 46794603 -203893251 + GA-rich Low_complexity Low_complexity 1 262 0 * 290 273 47 86 chr2 46794615 46794743 -203893111 + MIR SINE MIR 32 154 -108 200 198 187 66 chr2 46795504 46795595 -203892259 + MIR SINE MIR 119 220 -42 347 291 91 0 chr2 46796390 46796552 -203891302 + MIR3 SINE MIR 21 196 -53 23 54 0 0 chr2 46797128 46797165 -203890689 + AT_rich Low_complexity Low_complexity 1 37 0 493 322 6 11 chr2 46797185 46797368 -203890486 + MIR SINE MIR 81 262 0 2678 130 26 5 chr2 46797433 46797848 -203890006 - MSTA LTR MaLR 0 428 5 1522 281 44 13 chr2 46798340 46798799 -203889055 + MLT1J LTR MaLR 2 474 -37 574 217 333 4 chr2 46799136 46799376 -203888478 + MER5C DNA MER1_type 1 319 -5 509 205 25 3 chr2 46799571 46799698 -203888156 - LTR37A LTR ERV1 -22 446 280 11572 172 4 19 chr2 46799725 46803079 -203884775 - L1PB1 LINE L1 -1 6866 3565 4861 193 199 6 chr2 46803225 46804503 -203883351 - L1PB1 LINE L1 -5333 1530 6 330 26 0 0 chr2 46804781 46804820 -203883034 + (CA)n Simple_repeat Simple_repeat 1 39 0 270 287 42 21 chr2 46805035 46805178 -203882676 - LTR37B LTR ERV1 -317 151 6 220 280 190 40 chr2 46805907 46806107 -203881747 + MIR SINE MIR 33 262 0 1688 176 25 4 chr2 46806214 46806532 -203881322 + AluJo SINE Alu 1 324 0 2262 105 3 10 chr2 46807806 46808119 -203879735 + AluSx SINE Alu 1 311 -1 427 291 36 18 chr2 46808123 46808288 -203879566 - MLT1L LTR MaLR -43 572 405 405 232 50 0 chr2 46808324 46808423 -203879431 - MLT1L LTR MaLR -311 304 201 2268 109 3 22 chr2 46808721 46809034 -203878820 + AluSx SINE Alu 1 307 -5 889 208 29 0 chr2 46810918 46811091 -203876763 + MER45A DNA AcHobo 1 178 0 3197 111 11 1 chr2 46811127 46811863 -203875991 + L1PA12 LINE L1 4935 5679 -489 1931 75 0 4 chr2 46811963 46812215 -203875639 + L1PA12 LINE L1 5918 6168 0 469 232 71 19 chr2 46813214 46813369 -203874485 - MIR SINE MIR -2 260 98 457 118 219 101 chr2 46814039 46814158 -203873696 + MSTB1 LTR MaLR 100 232 -200 5071 179 55 15 chr2 46814227 46814699 -203873155 - Tigger6a DNA MER2_type -531 1066 614 2774 108 23 19 chr2 46814699 46815126 -203872728 + MSTB1 LTR MaLR 4 432 0 5071 179 55 15 chr2 46815126 46815678 -203872176 - Tigger6a DNA MER2_type -983 614 1 364 277 72 72 chr2 46815682 46815877 -203871977 - MIR SINE MIR -66 196 2 263 231 0 0 chr2 46816872 46816924 -203870930 + LTR30 LTR ERV1 1 52 -670 1216 125 0 157 chr2 46816924 46817205 -203870649 + LTR12 LTR ERV1 53 289 -425 296 241 11 0 chr2 46817205 46817292 -203870562 + LTR30 LTR ERV1 556 643 -79 707 100 0 0 chr2 46817294 46817394 -203870460 + LTR12 LTR ERV1 615 714 0 209 292 67 0 chr2 46817979 46818068 -203869786 - MIR SINE MIR -115 147 53 238 386 40 0 chr2 46818306 46818407 -203869447 + L2 LINE L2 3136 3240 -32 703 135 0 9 chr2 46818423 46818534 -203869320 + FRAM SINE Alu 18 127 -49 514 198 28 19 chr2 46818551 46818657 -203869197 + MLT1G3 LTR MaLR 163 269 -261 3929 224 90 16 chr2 46818657 46819808 -203868046 - L2 LINE L2 -689 2625 1390 10492 58 93 6 chr2 46819993 46821414 -203866440 - L1P LINE L1 -4602 1544 1 2192 202 15 13 chr2 46821428 46821894 -203865960 + MLT1C LTR MaLR 1 467 0 261 94 31 47 chr2 46821924 46821988 -203865866 + (CATATA)n Simple_repeat Simple_repeat 5 67 0 2866 81 33 15 chr2 46822044 46822441 -203865413 - MLT2A1 LTR ERVL -40 404 1 1390 267 121 15 chr2 46823265 46823670 -203864184 - MLT1J LTR MaLR -6 505 58 293 297 10 0 chr2 46823779 46823880 -203863974 - MIR SINE MIR -50 212 111 1403 251 41 34 chr2 46823888 46824299 -203863555 - LTR16A LTR ERVL 0 450 37 261 274 11 32 chr2 46824334 46824429 -203863425 - MIR SINE MIR -100 108 16 366 282 96 19 chr2 46824971 46825127 -203862727 - MIR3 SINE MIR -8 200 33 181 243 84 28 chr2 46827477 46827584 -203860270 + L2 LINE L2 2933 3045 -268 186 225 0 0 chr2 46827700 46827740 -203860114 + L2 LINE L2 3219 3258 -14 635 253 96 39 chr2 46829036 46829265 -203858589 + MIR SINE MIR 17 258 -4 1836 182 16 14 chr2 46829388 46829751 -203858103 + MLT1A1 LTR MaLR 2 365 0 1709 164 57 3 chr2 46829763 46830134 -203857720 - MER3 DNA MER1_type 0 2624 2234 588 174 113 0 chr2 46830137 46830252 -203857602 - MER3 DNA MER1_type -41 168 41 43869 31 22 2 chr2 46831572 46837604 -203850250 + L1PA2 LINE L1 1 6155 0 181 304 0 0 chr2 46837662 46837708 -203850146 + MIR SINE MIR 82 127 -81 523 293 130 5 chr2 46838799 46839007 -203848847 + MIR SINE MIR 16 249 -13 227 183 268 0 chr2 46839028 46839099 -203848755 + L2 LINE L2 3223 3312 -1 240 359 0 10 chr2 46840257 46840360 -203847494 - MIR SINE MIR -10 252 151 375 306 88 7 chr2 46840563 46840710 -203847144 - MIR SINE MIR -101 161 3 425 287 17 9 chr2 46841036 46841151 -203846703 + L2 LINE L2 3197 3312 -1 22 0 0 0 chr2 46841792 46841814 -203846040 + AT_rich Low_complexity Low_complexity 1 22 0 633 226 21 90 chr2 46841852 46841943 -203845911 - L1MC4a LINE L1 -1904 5904 5808 2317 59 0 0 chr2 46841943 46842249 -203845605 - AluY SINE Alu 0 317 12 633 226 21 90 chr2 46842249 46842389 -203845465 - L1MC4a LINE L1 -2000 5808 5687 5800 73 1 1 chr2 46842445 46843199 -203844655 + L1PA8 LINE L1 5419 6172 0 4127 168 62 46 chr2 46843267 46844160 -203843694 - L1MD2 LINE L1 -2 6357 5451 293 294 12 0 chr2 46844233 46844318 -203843536 - MIR SINE MIR 0 262 177 292 247 52 0 chr2 46845032 46845109 -203842745 - MIR3 SINE MIR -11 197 117 210 323 50 0 chr2 46845191 46845290 -203842564 - MIR SINE MIR -96 166 63 262 330 116 9 chr2 46845404 46845516 -203842338 + MIR3 SINE MIR 61 184 -24 4584 64 5 18 chr2 46846267 46846875 -203840979 - L1PA8 LINE L1 -3 6169 5570 537 242 141 24 chr2 46847174 46847422 -203840432 - L1MC4a LINE L1 -1899 5909 5633 1305 112 0 0 chr2 46847441 46847611 -203840243 + AluSp SINE Alu 130 299 -14 350 327 62 12 chr2 46847903 46848065 -203839789 + MIR3 SINE MIR 30 199 -9 2203 135 33 28 chr2 46848513 46848875 -203838979 + THE1B LTR MaLR 1 364 0 448 230 0 0 chr2 46849561 46849648 -203838206 + L2 LINE L2 3227 3313 0 275 313 69 64 chr2 46849647 46850342 -203837512 - L2 LINE L2 -175 3138 2372 * 551 288 93 4 chr2 46850392 46850618 -203837236 + MIR SINE MIR 17 262 0 754 196 6 19 chr2 46850729 46850887 -203836967 + MIR SINE MIR 7 162 -100 407 308 8 0 chr2 46851037 46851170 -203836684 - MIR SINE MIR -26 236 103 435 216 78 39 chr2 46851214 46851367 -203836487 - L1MC4a LINE L1 -423 5698 5540 592 286 36 29 chr2 46851430 46851861 -203835993 - L1MEc LINE L1 -3803 2412 2018 364 288 49 39 chr2 46852013 46852218 -203835636 + L1MB7 LINE L1 17 223 -6319 491 148 24 129 chr2 46852491 46852581 -203835273 - L1MC4a LINE L1 -238 7556 7466 1993 151 3 0 chr2 46852581 46852879 -203834975 - AluSx SINE Alu -12 300 2 491 148 24 129 chr2 46852879 46852945 -203834909 - L1MC4a LINE L1 -328 7466 7395 * 2796 257 74 44 chr2 46852938 46853646 -203834208 + L1MB7 LINE L1 1285 1970 -4855 2119 130 13 0 chr2 46853646 46853954 -203833900 + AluSx SINE Alu 1 312 0 2796 257 74 44 chr2 46853954 46854599 -203833255 + L1MB7 LINE L1 1970 2717 -4108 238 172 35 0 chr2 46854758 46854816 -203833038 + (TA)n Simple_repeat Simple_repeat 1 60 0 1438 177 0 4 chr2 46854817 46855054 -203832800 - AluJb SINE Alu -76 236 1 363 308 83 20 chr2 46855448 46855701 -203832153 - L1M4 LINE L1 -1462 4684 4416 2158 100 12 40 chr2 46855850 46856171 -203831683 - AluSx SINE Alu 0 312 1 3235 221 57 80 chr2 46856173 46858021 -203829833 - L1ME3A LINE L1 -2 6168 4391 1276 179 52 69 chr2 46858021 46858312 -203829542 - AluJo SINE Alu -26 286 1 3235 221 57 80 chr2 46858312 46858548 -203829306 - L1ME3A LINE L1 -1779 4391 4151 233 125 0 21 chr2 46859074 46859122 -203828732 + (TGAA)n Simple_repeat Simple_repeat 1 47 0 1975 122 0 72 chr2 46859395 46859715 -203828139 - AluSq SINE Alu -16 297 1 1032 101 0 29 chr2 46859716 46859855 -203827999 - AluSq/x SINE Alu -178 135 1 612 306 40 14 chr2 46861661 46861936 -203825918 + L2 LINE L2 1840 2121 -1193 433 250 0 0 chr2 46861943 46862047 -203825807 + L1MB7 LINE L1 4381 4484 -2160 702 207 42 26 chr2 46862047 46862240 -203825614 + MLT1D LTR MaLR 310 505 0 5136 200 44 30 chr2 46862277 46864435 -203823419 + L1MB7 LINE L1 4491 6674 -8 437 333 118 31 chr2 46864455 46864743 -203823111 + L2 LINE L2 2115 2427 -887 519 308 90 0 chr2 46865103 46865369 -203822485 - L2 LINE L2 -1047 2267 1978 239 322 74 47 chr2 46865382 46865531 -203822323 + L2 LINE L2 2930 3082 -190 1128 126 146 214 chr2 46866505 46866964 -203820890 - MSTA LTR MaLR 0 428 1 724 239 133 9 chr2 46867393 46867619 -203820235 + MIR SINE MIR 8 261 -1 221 325 0 39 chr2 46867977 46868054 -203819800 - L2 LINE L2 -2 3311 3238 419 319 86 6 chr2 46868072 46868235 -203819619 + MIR SINE MIR 20 195 -67 242 271 118 65 chr2 46868588 46868758 -203819096 - MIR3 SINE MIR -25 183 5 390 21 0 0 chr2 46868899 46868946 -203818908 + (CA)n Simple_repeat Simple_repeat 2 48 0 300 321 85 0 chr2 46870312 46870418 -203817436 + L2 LINE L2 3197 3311 -2 679 231 50 119 chr2 46870674 46871091 -203816763 - MLT1H LTR MaLR 0 549 49 182 336 37 37 chr2 46871841 46871948 -203815906 + MIR SINE MIR 42 148 -114 232 274 65 0 chr2 46873289 46873351 -203814503 + MIR SINE MIR 33 98 -164 1399 227 47 5 chr2 46873372 46873552 -203814302 - MER119 DNA MER1_type 0 583 412 2267 92 3 0 chr2 46873552 46873879 -203813975 - AluSx SINE Alu 0 328 1 1399 227 47 5 chr2 46873879 46874190 -203813664 - MER119 DNA MER1_type -171 412 31 195 182 0 0 chr2 46874789 46874822 -203813032 + L2 LINE L2 3279 3311 -2 1106 138 0 0 chr2 46876674 46876834 -203811020 - AluSg/x SINE Alu -4 308 149 2112 129 0 3 chr2 46877156 46877451 -203810403 + AluSx SINE Alu 1 294 -18 808 222 116 110 chr2 46877936 46878220 -203809634 - MLT1J LTR MaLR -8 503 222 1724 151 4 0 chr2 46878220 46878492 -203809362 + AluJo SINE Alu 32 304 -8 808 222 116 110 chr2 46878492 46878628 -203809226 - MLT1J LTR MaLR -289 222 77 1383 202 116 48 chr2 46878628 46878999 -203808855 - MLT2C1 LTR ERVL -1 396 1 808 222 116 110 chr2 46878999 46879076 -203808778 - MLT1J LTR MaLR -434 77 2 2279 101 3 0 chr2 46879095 46879392 -203808462 - AluSg SINE Alu -11 299 2 675 212 22 7 chr2 46879577 46879714 -203808140 - MER58B DNA MER1_type -6 335 197 364 229 147 37 chr2 46879784 46879893 -203807961 - MIR SINE MIR -63 145 25 276 170 0 0 chr2 46879995 46880048 -203807806 + (TG)n Simple_repeat Simple_repeat 2 54 0 550 192 75 0 chr2 46880388 46880508 -203807346 + MER3 DNA MER1_type 41 122 -87 1020 182 58 12 chr2 46880517 46880759 -203807095 + MER3 DNA MER1_type 2234 2486 0 811 160 0 23 chr2 46880799 46880930 -203806924 + FLAM_C SINE Alu 1 128 -15 592 133 66 60 chr2 46880931 46881082 -203806772 + MER3 DNA MER1_type 2472 2623 0 209 364 0 0 chr2 46881409 46881464 -203806390 + MIR SINE MIR 93 147 -61 2152 262 126 24 chr2 46882607 46883455 -203804399 + L2 LINE L2 1 935 -2379 535 325 25 25 chr2 46883457 46883620 -203804234 + MER91A DNA MER1_type 5 167 -29 254 303 66 0 chr2 46883621 46883697 -203804157 + MER91A DNA MER1_type 116 196 0 * 855 281 85 7 chr2 46883697 46883952 -203803902 + L2 LINE L2 919 1194 -2120 774 120 32 0 chr2 46884088 46884213 -203803641 - L1 LINE L1 -1968 4178 4050 208 214 117 68 chr2 46884314 46884417 -203803437 + MIR3 SINE MIR 101 208 0 686 238 114 43 chr2 46884974 46885255 -203802599 + MLT1K LTR MaLR 171 471 -117 649 233 143 36 chr2 46885582 46885805 -203802049 - MIR SINE MIR 0 262 16 970 224 77 42 chr2 46887335 46887688 -203800166 + L1MC5 LINE L1 7157 7521 -440 1877 123 48 7 chr2 46887831 46888124 -203799730 - MSTC LTR MaLR -6 422 118 986 269 99 12 chr2 46888340 46888674 -203799180 - MLT1I LTR MaLR 0 409 47 4655 164 40 14 chr2 46888696 46889562 -203798292 + Tigger6b DNA MER2_type 2 890 -707 2963 164 6 21 chr2 46889557 46890069 -203797785 + Tigger6b DNA MER2_type 1094 1597 0 * 471 229 21 64 chr2 46890863 46891003 -203796851 + MER94 DNA DNA 1 134 0 1260 235 93 12 chr2 46891094 46891426 -203796428 - LTR16A LTR ERVL -3 447 89 468 300 185 0 chr2 46891784 46891984 -203795870 - MIR SINE MIR -24 238 2 378 0 0 0 chr2 46894249 46894291 -203793563 + (CA)n Simple_repeat Simple_repeat 2 43 0 880 134 0 8 chr2 46894566 46894700 -203793154 - MLT1A1 LTR MaLR 0 365 233 12210 178 46 25 chr2 46894700 46899121 -203788733 - L1 LINE L1 -2027 4821 309 340 253 10 40 chr2 46899619 46899718 -203788136 + MIR SINE MIR 4 99 -163 7669 231 94 40 chr2 46899760 46899843 -203788011 - L1MEc LINE L1 -987 5395 5318 1238 204 38 107 chr2 46899843 46900235 -203787619 - MLT1A1 LTR MaLR 0 365 1 7669 231 94 40 chr2 46900235 46903167 -203784687 - L1MEc LINE L1 -1064 5318 2115 1092 274 22 11 chr2 46903205 46903570 -203784284 - L1MEc LINE L1 -4876 1508 1140 797 282 118 24 chr2 46904505 46905130 -203782724 + L2 LINE L2 2567 3310 -3 2300 111 60 23 chr2 46906713 46907064 -203780790 + THE1B LTR MaLR 1 364 0 192 179 0 0 chr2 46908192 46908231 -203779623 + (CA)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr2 46908415 46908435 -203779419 + (T)n Simple_repeat Simple_repeat 1 20 0 2688 124 32 2 chr2 46909371 46909783 -203778071 - MSTA LTR MaLR -4 424 1 230 220 0 40 chr2 46910161 46910261 -203777593 + (TTCA)n Simple_repeat Simple_repeat 1 96 0 209 108 27 0 chr2 46910603 46910640 -203777214 + (TG)n Simple_repeat Simple_repeat 2 39 0 561 206 114 0 chr2 47011195 47011326 -203676528 - MER69A DNA AcHobo -30 147 2 209 270 90 36 chr2 47012319 47012430 -203675424 + MIR SINE MIR 35 151 -111 663 194 131 51 chr2 47012986 47013223 -203674631 + MLT1J1 LTR MaLR 2 257 -189 340 261 11 11 chr2 47013270 47013362 -203674492 + MLT1J1 LTR MaLR 355 446 0 236 135 14 68 chr2 47013837 47013970 -203673884 + (CATAA)n Simple_repeat Simple_repeat 1 125 0 226 280 188 65 chr2 47013974 47014081 -203673773 - L2 LINE L2 -1196 2118 2026 2201 92 3 3 chr2 47014081 47014384 -203673470 + AluSc SINE Alu 1 303 -6 226 280 188 65 chr2 47014384 47014786 -203673068 - L2 LINE L2 -1288 2026 1546 234 62 0 0 chr2 47017357 47017389 -203670465 + (T)n Simple_repeat Simple_repeat 1 32 0 258 224 30 30 chr2 47017389 47017456 -203670398 + MIR SINE MIR 91 157 -105 1865 129 0 31 chr2 47017467 47017761 -203670093 + AluSx SINE Alu 3 287 -25 314 268 96 57 chr2 47018170 47018327 -203669527 + MLT1I LTR MaLR 1 163 -246 897 151 311 0 chr2 47018353 47018494 -203669360 - AluJo SINE Alu -32 280 184 186 71 0 0 chr2 47018494 47018522 -203669332 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 897 151 311 0 chr2 47018522 47018586 -203669268 - AluJo SINE Alu -128 184 11 993 239 12 36 chr2 47018596 47018843 -203669011 + MLT1I LTR MaLR 167 407 -2 1742 157 3 23 chr2 47019081 47019381 -203668473 + AluJb SINE Alu 1 294 -18 217 283 60 60 chr2 47020349 47020515 -203667339 + L2 LINE L2 2933 3098 -174 560 156 101 0 chr2 47021387 47021496 -203666358 - MER96B DNA MER1_type? 0 417 298 529 221 97 0 chr2 47021493 47021647 -203666207 - MER96B DNA MER1_type? -248 169 1 * 265 261 14 0 chr2 47021773 47021842 -203666012 + L1ME LINE L1 5402 5471 -650 26 82 0 0 chr2 47023199 47023260 -203664594 + GC_rich Low_complexity Low_complexity 1 61 0 267 54 0 0 chr2 47023383 47023420 -203664434 + (CA)n Simple_repeat Simple_repeat 1 37 0 231 114 0 0 chr2 47025694 47025729 -203662125 + (T)n Simple_repeat Simple_repeat 1 35 0 270 307 80 33 chr2 47026695 47026845 -203661009 - MIR3 SINE MIR -18 190 34 1517 109 32 0 chr2 47027568 47027788 -203660066 - MER30 DNA MER1_type 0 230 4 1592 165 0 64 chr2 47027867 47028195 -203659659 + AluJo SINE Alu 1 307 -5 340 310 93 16 chr2 47028988 47029117 -203658737 - MER5A DNA MER1_type -50 139 1 894 244 4 70 chr2 47029588 47029846 -203658008 + MIR SINE MIR 22 262 0 249 302 66 19 chr2 47030154 47030260 -203657594 - MER5B DNA MER1_type -5 173 63 556 283 64 5 chr2 47030846 47031033 -203656821 + MIR SINE MIR 65 262 0 1635 287 122 18 chr2 47031342 47032361 -203655493 + L2 LINE L2 2185 3313 0 216 0 0 0 chr2 47032380 47032404 -203655450 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 2022 110 0 30 chr2 47033511 47033811 -203654043 - AluSx SINE Alu -21 291 1 2182 93 0 34 chr2 47033840 47034162 -203653692 - AluY SINE Alu 0 311 1 317 228 214 28 chr2 47034532 47034677 -203653177 - L2 LINE L2 -1 3312 3141 182 204 19 74 chr2 47034814 47034868 -203652986 + MIR3 SINE MIR 121 171 -37 276 30 0 0 chr2 47035184 47035217 -203652637 + (CAAG)n Simple_repeat Simple_repeat 2 34 0 305 299 19 0 chr2 47035425 47035532 -203652322 - MER103 DNA DNA -55 111 3 2244 78 0 0 chr2 47035839 47036123 -203651731 + AluY SINE Alu 15 298 -13 294 211 99 0 chr2 47036317 47036388 -203651466 - L2 LINE L2 -7 3265 3188 202 261 97 82 chr2 47036400 47036534 -203651320 - L3b LINE CR1 -178 1405 1270 459 258 114 0 chr2 47036574 47036706 -203651148 + MIR SINE MIR 23 169 -93 413 276 92 29 chr2 47037620 47037789 -203650065 + MIR SINE MIR 41 214 -48 891 193 11 5 chr2 47037961 47038148 -203649706 - MER53 DNA DNA 0 189 2 1651 147 0 58 chr2 47039188 47039352 -203648502 - AluJo SINE Alu -36 276 135 2184 96 0 0 chr2 47039352 47039643 -203648211 + AluSx SINE Alu 1 291 -21 1651 147 0 58 chr2 47039643 47039771 -203648083 - AluJo SINE Alu -177 135 1 641 148 43 0 chr2 47039987 47040102 -203647752 - L1MC2 LINE L1 -6 6338 6219 573 256 72 60 chr2 47040171 47040382 -203647472 + MIR SINE MIR 7 223 -39 1834 118 4 0 chr2 47040382 47040652 -203647202 + AluSq SINE Alu 1 271 -42 573 256 72 60 chr2 47040652 47040690 -203647164 + MIR SINE MIR 223 259 -3 410 208 20 59 chr2 47041001 47041102 -203646752 + MIR SINE MIR 79 175 -87 249 333 14 35 chr2 47041899 47042043 -203645811 + L1ME LINE L1 5463 5603 -559 1969 121 0 0 chr2 47042052 47042354 -203645500 + AluSx SINE Alu 1 302 0 492 301 88 9 chr2 47042663 47042889 -203644965 - MER112 DNA MER1_type 0 260 17 202 288 0 15 chr2 47043061 47043127 -203644727 - L2 LINE L2 -213 3059 2995 218 281 22 22 chr2 47043851 47043940 -203643914 + CT-rich Low_complexity Low_complexity 4 92 0 1530 184 33 20 chr2 47044110 47044415 -203643439 + AluJo SINE Alu 1 309 -3 993 153 12 0 chr2 47044501 47044750 -203643104 + (TCCA)n Simple_repeat Simple_repeat 1 252 0 282 138 0 0 chr2 47044757 47044815 -203643039 + (CAGC)n Simple_repeat Simple_repeat 4 61 0 1628 160 6 35 chr2 47045067 47045386 -203642468 + AluJo SINE Alu 1 310 -2 336 278 76 21 chr2 47045631 47045775 -203642079 + MER103 DNA DNA 5 156 -10 614 285 62 51 chr2 47049137 47049411 -203638443 - L2 LINE L2 -2 3270 2994 243 227 0 0 chr2 47049506 47049550 -203638304 + polypyrimidine Low_complexity Low_complexity 2 45 0 2403 25 0 0 chr2 47049661 47049943 -203637911 - AluYb8 SINE Alu 0 318 37 185 259 103 17 chr2 47049943 47050001 -203637853 - L2 LINE L2 -565 2749 2687 219 221 59 118 chr2 47053201 47053269 -203634585 - L2 LINE L2 -5 3308 3245 2308 93 0 0 chr2 47053332 47053642 -203634212 + AluSg SINE Alu 1 310 0 372 188 38 0 chr2 47054440 47054520 -203633334 - L1MA10 LINE L1 0 6334 6252 1057 164 0 0 chr2 47054740 47054917 -203632937 - AluSg/x SINE Alu -2 310 134 1852 125 50 0 chr2 47054917 47055196 -203632658 - AluSq SINE Alu -20 293 1 488 244 148 19 chr2 47056739 47056948 -203630906 + MER112 DNA MER1_type 5 240 -20 277 371 26 0 chr2 47056977 47057093 -203630761 + MER91A DNA MER1_type 35 153 -43 941 187 0 23 chr2 47057831 47058002 -203629852 + AluJo SINE Alu 1 167 -145 277 312 122 14 chr2 47058671 47058892 -203628962 + L1MC/D LINE L1 4077 4321 -1825 444 223 7 27 chr2 47059550 47059698 -203628156 + L1MC/D LINE L1 5254 5398 -2410 374 323 70 6 chr2 47059750 47059908 -203627946 + L1MC/D LINE L1 5494 5661 -2147 21 36 0 0 chr2 47060583 47060611 -203627243 + AT_rich Low_complexity Low_complexity 1 28 0 46 54 0 0 chr2 47061824 47061898 -203625956 + AT_rich Low_complexity Low_complexity 1 74 0 1873 137 41 20 chr2 47061951 47062244 -203625610 + AluSg SINE Alu 1 299 -11 213 269 90 82 chr2 47064411 47064499 -203623355 - L2 LINE L2 -1 3271 3180 1458 203 109 9 chr2 47064499 47064922 -203622932 - MLT1C LTR MaLR 0 467 3 213 269 90 82 chr2 47064922 47064967 -203622887 - L2 LINE L2 -92 3180 3137 291 104 0 0 chr2 47065032 47065080 -203622774 + (CA)n Simple_repeat Simple_repeat 2 49 0 2075 138 7 0 chr2 47067814 47068110 -203619744 + AluSx SINE Alu 1 298 -14 1531 28 11 0 chr2 47068266 47068445 -203619409 - L1PA3 LINE L1 -3 6152 5972 745 192 0 0 chr2 47068449 47068579 -203619275 - FLAM_C SINE Alu -3 130 1 27 0 0 0 chr2 47068674 47068701 -203619153 + AT_rich Low_complexity Low_complexity 1 27 0 226 240 20 0 chr2 47070891 47070954 -203616900 + GA-rich Low_complexity Low_complexity 1 64 0 1517 237 55 20 chr2 47072974 47073425 -203614429 + MLT1C LTR MaLR 1 467 0 232 253 80 0 chr2 47073447 47073522 -203614332 + MIR SINE MIR 168 248 -14 213 178 0 0 chr2 47073651 47073696 -203614158 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 2168 110 20 0 chr2 47074234 47074535 -203613319 + AluSx SINE Alu 1 307 -5 266 296 106 28 chr2 47074665 47074807 -203613047 + MIR SINE MIR 90 242 -20 199 303 199 47 chr2 47075345 47075556 -203612298 - L3b LINE CR1 -188 1395 1153 1871 179 0 10 chr2 47075576 47075889 -203611965 + AluJo SINE Alu 1 310 -2 244 244 58 35 chr2 47076345 47076431 -203611423 - L2 LINE L2 0 3313 3226 189 281 227 0 chr2 47076911 47077039 -203610815 + MIR SINE MIR 95 251 -11 201 333 12 76 chr2 47077211 47077382 -203610472 + MIR SINE MIR 57 216 -46 592 292 251 32 chr2 47080174 47080667 -203607187 - L3 LINE CR1 -758 819 219 21 0 0 0 chr2 47081327 47081348 -203606506 + AT_rich Low_complexity Low_complexity 1 21 0 784 193 110 0 chr2 47082087 47082305 -203605549 + MER112 DNA MER1_type 10 251 -9 463 252 95 43 chr2 47082456 47082666 -203605188 + L2 LINE L2 3059 3279 -34 193 232 61 49 chr2 47083876 47083958 -203603896 + L2 LINE L2 3231 3313 0 310 290 65 9 chr2 47083963 47084070 -203603784 + L1ME4a LINE L1 5964 6076 -45 724 283 72 54 chr2 47084624 47085108 -203602746 + L1MEd LINE L1 330 822 -5297 2309 104 0 0 chr2 47085241 47085539 -203602315 + AluSg SINE Alu 1 298 -12 1077 211 60 13 chr2 47085563 47086057 -203601797 + L1ME1 LINE L1 4979 5500 -666 6466 175 120 59 chr2 47086096 47087750 -203600104 - MER52A LTR ERV1 0 1755 1 1706 190 40 29 chr2 47087750 47088229 -203599625 + L1ME1 LINE L1 5516 5943 -223 639 177 0 0 chr2 47089101 47089214 -203598640 + Tigger7 DNA MER2_type 867 979 -1508 1677 91 0 9 chr2 47089214 47089435 -203598419 + AluY SINE Alu 85 303 -8 196 223 173 93 chr2 47089531 47089670 -203598184 - MIR SINE MIR -72 190 41 24 0 0 0 chr2 47089936 47089960 -203597894 + AT_rich Low_complexity Low_complexity 1 24 0 499 258 22 93 chr2 47090017 47090179 -203597675 - MIR SINE MIR -48 214 74 2521 80 0 6 chr2 47090179 47090492 -203597362 + AluY SINE Alu 1 311 0 499 258 22 93 chr2 47090492 47090560 -203597294 - MIR SINE MIR -188 74 3 22 56 0 0 chr2 47092335 47092371 -203595483 + AT_rich Low_complexity Low_complexity 1 36 0 59 53 0 0 chr2 47093217 47093311 -203594543 + AT_rich Low_complexity Low_complexity 1 94 0 227 238 87 35 chr2 47093358 47093589 -203594265 + L1 LINE L1 3076 3318 -2828 414 277 46 51 chr2 47093727 47093922 -203593932 + L1 LINE L1 3739 3932 -2214 1608 166 0 49 chr2 47094761 47095068 -203592786 + AluJb SINE Alu 13 304 -8 228 269 134 0 chr2 47095275 47095424 -203592430 + L1MEd LINE L1 889 1057 -5075 735 250 69 43 chr2 47095458 47095930 -203591924 + L1MEd LINE L1 1062 1725 -4470 310 374 155 21 chr2 47096821 47097195 -203590659 - L2 LINE L2 -338 2976 2553 1355 191 13 39 chr2 47099277 47099586 -203588268 + MLT1A2 LTR MaLR 74 374 0 3793 117 15 39 chr2 47099843 47100285 -203587569 + LTR26 LTR ERV1 1 452 -151 1616 165 50 23 chr2 47100285 47100588 -203587266 + AluJo SINE Alu 1 311 -1 3793 117 15 39 chr2 47100588 47100669 -203587185 + LTR26 LTR ERV1 452 509 -94 2292 76 13 20 chr2 47100669 47100972 -203586882 - AluY SINE Alu -10 301 1 3793 117 15 39 chr2 47100972 47101065 -203586789 + LTR26 LTR ERV1 509 603 0 494 270 184 10 chr2 47101576 47101629 -203586225 + MIR SINE MIR 2 44 -218 2177 127 0 16 chr2 47101629 47101943 -203585911 - AluSx SINE Alu -3 309 1 494 270 184 10 chr2 47101943 47102085 -203585769 + MIR SINE MIR 44 231 -31 180 0 0 0 chr2 47102099 47102119 -203585735 + (CTG)n Simple_repeat Simple_repeat 1 20 0 404 371 45 20 chr2 47102144 47102389 -203585465 - L2 LINE L2 -218 3054 2804 239 136 23 0 chr2 47103139 47103183 -203584671 - Charlie8 DNA MER1_type -1946 471 427 746 210 0 0 chr2 47103364 47103488 -203584366 + FLAM_A SINE Alu 1 124 -9 21 0 0 0 chr2 47103494 47103515 -203584339 + AT_rich Low_complexity Low_complexity 1 21 0 2303 102 0 25 chr2 47103866 47104180 -203583674 - AluSp SINE Alu -7 306 1 500 289 175 35 chr2 47104192 47104648 -203583206 + L2 LINE L2 2458 2977 -337 1833 155 3 37 chr2 47104972 47105295 -203582559 + AluJb SINE Alu 1 312 0 436 312 102 12 chr2 47105626 47105848 -203582006 - MIR SINE MIR -2 260 19 1547 199 19 23 chr2 47106004 47106311 -203581543 + AluJo SINE Alu 1 306 -6 296 233 0 44 chr2 47106450 47106540 -203581314 - L1MC/D LINE L1 -1990 5818 5733 197 211 44 67 chr2 47106798 47106888 -203580966 + MIR SINE MIR 100 187 -75 23 0 0 0 chr2 47107339 47107362 -203580492 + AT_rich Low_complexity Low_complexity 1 23 0 2197 106 0 22 chr2 47107400 47107712 -203580142 - AluSg1 SINE Alu -4 305 1 380 313 154 14 chr2 47108343 47108557 -203579297 - MIR SINE MIR -12 250 7 7692 217 54 9 chr2 47108603 47109883 -203577971 + L1MB8 LINE L1 3096 4510 -1636 1407 213 0 0 chr2 47109883 47110122 -203577732 - MER8 DNA MER2_type 0 239 1 7692 217 54 9 chr2 47110122 47110967 -203576887 + L1MB8 LINE L1 4510 5316 -830 955 77 0 0 chr2 47110989 47111106 -203576748 - AluSq/x SINE Alu -195 117 1 2772 195 109 2 chr2 47111106 47111731 -203576123 + L1MB8 LINE L1 5306 5997 -177 498 206 28 14 chr2 47111736 47111877 -203575977 + L1MB8 LINE L1 6036 6178 0 28 29 0 0 chr2 47112001 47112036 -203575818 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr2 47112343 47112385 -203575469 + AT_rich Low_complexity Low_complexity 1 42 0 1548 202 7 3 chr2 47112508 47112805 -203575049 + AluJb SINE Alu 1 298 -14 2079 135 16 0 chr2 47114364 47114668 -203573186 - 7SLRNA srpRNA srpRNA -6 314 6 26 0 0 0 chr2 47114777 47114803 -203573051 + AT_rich Low_complexity Low_complexity 1 26 0 489 309 9 19 chr2 47114935 47115145 -203572709 + HAL1b LINE L1 395 602 -746 1206 209 19 0 chr2 47115161 47115376 -203572478 + MER58A DNA MER1_type 1 219 -5 3831 227 82 49 chr2 47115681 47117488 -203570366 + L1M4 LINE L1 2 1910 -4736 941 129 0 7 chr2 47117488 47117643 -203570211 + L1MB2 LINE L1 6014 6167 -4 3831 227 82 49 chr2 47117643 47117899 -203569955 + L1M4 LINE L1 1910 2156 -4490 258 315 110 31 chr2 47118107 47118234 -203569620 + MIR3 SINE MIR 4 140 -68 705 251 59 16 chr2 47120107 47120294 -203567560 + MIR SINE MIR 1 195 -67 2124 117 7 0 chr2 47120888 47121179 -203566675 - AluSx SINE Alu -14 298 6 2173 151 60 42 chr2 47121211 47121297 -203566557 + Tigger2 DNA MER2_type 2280 2363 -355 207 0 0 0 chr2 47121297 47121320 -203566534 + (TCC)n Simple_repeat Simple_repeat 3 25 0 2173 151 60 42 chr2 47121320 47121663 -203566191 + Tigger2 DNA MER2_type 2363 2717 -1 185 283 50 33 chr2 47121788 47121848 -203566006 + L2 LINE L2 3241 3301 -12 1112 175 50 88 chr2 47123852 47124182 -203563672 + L1MA9 LINE L1 5970 6278 -34 23 0 0 0 chr2 47124182 47124205 -203563649 + AT_rich Low_complexity Low_complexity 1 23 0 380 265 109 8 chr2 47124588 47124898 -203562956 + L1MC4a LINE L1 5029 5374 -786 25 0 0 0 chr2 47124995 47125020 -203562834 + AT_rich Low_complexity Low_complexity 1 25 0 2113 100 0 50 chr2 47125519 47125839 -203562015 - AluSc SINE Alu -5 304 1 2497 71 0 0 chr2 47125854 47126163 -203561691 - AluSg1 SINE Alu 0 309 1 654 312 96 32 chr2 47126163 47126741 -203561113 + L2 LINE L2 1810 3272 0 2368 225 72 19 chr2 47127098 47127725 -203560129 - L1MC4 LINE L1 -143 7899 7240 1524 181 134 3 chr2 47127727 47128041 -203559813 - L1MC4 LINE L1 -953 7089 6735 527 146 22 0 chr2 47128045 47128134 -203559720 + L1MC4a LINE L1 6671 6761 -1047 641 232 87 24 chr2 47128683 47128890 -203558964 + MER112 DNA MER1_type 41 260 0 468 310 25 13 chr2 47129345 47129503 -203558351 + Charlie8 DNA MER1_type 115 274 -2143 2019 149 3 0 chr2 47130049 47130344 -203557510 + AluSx SINE Alu 1 296 -16 466 278 149 36 chr2 47131223 47131611 -203556243 + L1MC4a LINE L1 5432 5863 -1945 1674 170 10 14 chr2 47131729 47132018 -203555836 - AluJo SINE Alu -15 297 10 43 20 0 0 chr2 47132026 47132076 -203555778 + AT_rich Low_complexity Low_complexity 1 50 0 292 234 23 18 chr2 47132090 47132389 -203555465 + (TTATA)n Simple_repeat Simple_repeat 1 300 0 75 65 0 0 chr2 47132389 47132527 -203555327 + AT_rich Low_complexity Low_complexity 1 138 0 1058 310 148 20 chr2 47132894 47133590 -203554264 + L2 LINE L2 2188 2972 -342 349 272 11 0 chr2 47134037 47134129 -203553725 + MLT1K LTR MaLR 493 585 -3 183 353 15 15 chr2 47134567 47134635 -203553219 - L2 LINE L2 -210 3062 2995 268 355 95 42 chr2 47134944 47135324 -203552530 - L2 LINE L2 -4 3268 2869 4067 139 7 68 chr2 47135326 47135602 -203552252 + LTR8 LTR ERV1 1 292 -399 2300 102 26 47 chr2 47135602 47135915 -203551939 + THE1C LTR MaLR 1 306 -69 2295 92 14 0 chr2 47135915 47136208 -203551646 + AluSq SINE Alu 1 297 -16 2300 102 26 47 chr2 47136208 47136277 -203551577 + THE1C LTR MaLR 306 375 0 4067 139 7 68 chr2 47136277 47136736 -203551118 + LTR8 LTR ERV1 292 691 0 2060 223 114 24 chr2 47136845 47137095 -203550759 + MER50 LTR ERV1 10 236 -498 2916 54 3 0 chr2 47137095 47137449 -203550405 + THE1A LTR MaLR 1 355 0 2060 223 114 24 chr2 47137449 47137863 -203549991 + MER50 LTR ERV1 236 734 0 836 188 0 0 chr2 47137953 47138091 -203549763 + MER5A DNA MER1_type 1 138 -51 24 32 0 0 chr2 47138211 47138242 -203549612 + AT_rich Low_complexity Low_complexity 1 31 0 385 200 131 54 chr2 47138364 47138494 -203549360 - MIR SINE MIR -45 217 78 500 193 64 9 chr2 47138546 47138655 -203549199 + THE1C LTR MaLR 53 167 -208 434 250 174 5 chr2 47139010 47139206 -203548648 + L1ME3A LINE L1 5937 6165 -5 1941 161 82 70 chr2 47139842 47140339 -203547515 + LTR54 LTR ERV1 8 510 0 207 250 0 62 chr2 47141837 47141917 -203545937 + MIR SINE MIR 187 261 -1 457 90 22 0 chr2 47142110 47142199 -203545655 + (CA)n Simple_repeat Simple_repeat 2 92 0 2145 114 0 7 chr2 47142319 47142617 -203545237 + AluSc SINE Alu 1 296 -13 266 260 104 21 chr2 47143233 47143329 -203544525 - MER5A DNA MER1_type -85 104 1 2269 59 35 3 chr2 47143513 47143800 -203544054 + AluY SINE Alu 1 296 -15 2375 156 123 23 chr2 47145071 47145584 -203542270 + L1MD2 LINE L1 5796 6359 0 22 35 0 0 chr2 47146528 47146557 -203541297 + AT_rich Low_complexity Low_complexity 1 29 0 685 237 70 5 chr2 47146656 47146842 -203541012 + MIR SINE MIR 47 244 -18 190 200 89 0 chr2 47146810 47146855 -203540999 + L2 LINE L2 3258 3306 -7 * 1388 243 239 23 chr2 47148458 47148705 -203539149 + L2 LINE L2 1925 2117 -1197 1969 148 3 3 chr2 47148705 47149010 -203538844 - AluSx SINE Alu -7 305 1 1388 243 239 23 chr2 47149010 47149461 -203538393 + L2 LINE L2 2117 2774 -540 203 256 136 73 chr2 47149470 47149661 -203538193 - L2 LINE L2 -1046 2268 2066 902 267 63 40 chr2 47149676 47150024 -203537830 + L2 LINE L2 2810 3165 -148 1020 184 28 0 chr2 47150076 47150255 -203537599 + MER20 DNA MER1_type 36 219 0 237 208 151 0 chr2 47150258 47150311 -203537543 - L2 LINE L2 -68 3245 3185 311 261 33 0 chr2 47150336 47150428 -203537426 + L2 LINE L2 3219 3313 0 2263 110 0 0 chr2 47150802 47151110 -203536744 + AluSx SINE Alu 1 308 -4 2409 79 3 16 chr2 47151324 47151640 -203536214 - AluSp SINE Alu -1 312 1 399 282 0 33 chr2 47152438 47152619 -203535235 + L1M4 LINE L1 4860 5034 -1112 844 246 262 36 chr2 47152748 47153191 -203534663 + HAL1 LINE L1 211 753 -1754 1237 249 124 31 chr2 47153191 47153649 -203534205 - Charlie2 DNA MER1_type -2358 504 4 509 265 87 57 chr2 47153731 47153995 -203533859 + L2 LINE L2 2185 2456 -858 2018 109 46 0 chr2 47154003 47154287 -203533567 - AluSx SINE Alu -15 297 1 545 195 98 16 chr2 47154293 47154468 -203533386 - L1MA10 LINE L1 -2 6332 6134 348 308 204 20 chr2 47154469 47155142 -203532712 + L2 LINE L2 2482 3308 -5 244 274 185 7 chr2 47155571 47155706 -203532148 - MIR3 SINE MIR -1 207 49 192 241 0 37 chr2 47155826 47155880 -203531974 - L2 LINE L2 -21 3251 3200 1383 54 0 0 chr2 47155956 47156122 -203531732 + AluY SINE Alu 130 295 -16 854 242 212 12 chr2 47157291 47157621 -203530233 - MSTD LTR MaLR 0 396 1 722 288 33 25 chr2 47158428 47158671 -203529183 - MIR SINE MIR 0 262 18 342 220 0 0 chr2 47158696 47158755 -203529099 + MER2 DNA MER2_type 15 73 -272 211 244 49 0 chr2 47159133 47159174 -203528680 + L2 LINE L2 3250 3292 -21 211 244 44 0 chr2 47159260 47159305 -203528549 + L2 LINE L2 3250 3296 -17 2733 164 28 39 chr2 47159465 47160053 -203527801 + MLT2B3 LTR ERVL 1 520 0 1189 153 0 0 chr2 47160145 47160322 -203527532 + AluYb8 SINE Alu 131 307 -11 3368 179 113 14 chr2 47161557 47161771 -203526083 - L1ME1 LINE L1 -5 6161 5970 2062 102 31 55 chr2 47161771 47162153 -203525701 - THE1C LTR MaLR -2 373 1 3368 179 113 14 chr2 47162153 47162778 -203525076 - L1ME1 LINE L1 -196 5970 5239 278 293 66 78 chr2 47163385 47163552 -203524302 - MER5A DNA MER1_type -9 180 16 374 296 9 0 chr2 47163854 47163962 -203523892 - MIR SINE MIR -74 188 80 22 0 0 0 chr2 47163990 47164012 -203523842 + AT_rich Low_complexity Low_complexity 1 22 0 1815 155 0 4 chr2 47164375 47164640 -203523214 - AluJb SINE Alu -45 267 4 215 147 15 44 chr2 47164729 47164797 -203523057 + GA-rich Low_complexity Low_complexity 3 68 0 2175 134 3 0 chr2 47165214 47165519 -203522335 + AluSg SINE Alu 1 306 -4 303 261 23 11 chr2 47165898 47165986 -203521868 - L1ME1 LINE L1 -906 5240 5152 365 285 81 35 chr2 47166254 47166426 -203521428 - MER5A DNA MER1_type -5 184 5 560 290 108 36 chr2 47166539 47166604 -203521250 - LTR33 LTR ERVL -74 447 388 2448 78 3 3 chr2 47166604 47166911 -203520943 + AluY SINE Alu 1 307 -4 560 290 108 36 chr2 47166911 47167262 -203520592 - LTR33 LTR ERVL -133 388 1 29 0 0 0 chr2 47167527 47167556 -203520298 + AT_rich Low_complexity Low_complexity 1 29 0 626 230 6 45 chr2 47168800 47168978 -203518876 - MER104 DNA Tc2 -2 178 8 1405 113 29 5 chr2 47168984 47169188 -203518666 + AluJo SINE Alu 7 215 -97 2411 75 0 3 chr2 47169440 47169735 -203518119 + AluSg SINE Alu 1 294 -16 323 257 150 9 chr2 47170084 47170197 -203517657 + MIR3 SINE MIR 52 180 -28 198 359 35 28 chr2 47170182 47170327 -203517527 + L3 LINE CR1 361 506 -1071 * 615 205 10 45 chr2 47170355 47170510 -203517344 + MLT1F LTR MaLR 391 503 -2 464 347 158 3 chr2 47170512 47170878 -203516976 + L3 LINE CR1 1093 1515 -62 279 296 72 59 chr2 47171181 47171333 -203516521 - MIR SINE MIR -62 146 21 548 338 44 18 chr2 47172354 47172604 -203515250 + MIR SINE MIR 3 256 -6 1363 240 92 37 chr2 47173086 47173555 -203514299 - MLT1D LTR MaLR 0 505 9 1974 171 0 0 chr2 47173594 47173887 -203513967 - AluJb SINE Alu -19 293 1 512 229 47 110 chr2 47174059 47174378 -203513476 - MLT1L LTR MaLR -312 303 5 918 184 0 6 chr2 47174648 47174806 -203513048 + FRAM SINE Alu 1 157 -9 1190 92 87 0 chr2 47175477 47175650 -203512204 + L1PA16 LINE L1 5970 6157 -9 25 75 0 0 chr2 47175655 47175708 -203512146 + AT_rich Low_complexity Low_complexity 1 53 0 3725 238 65 19 chr2 47175754 47176937 -203510917 - L1MEc LINE L1 -5125 1271 34 22 35 0 0 chr2 47176945 47176974 -203510880 + AT_rich Low_complexity Low_complexity 1 29 0 704 202 138 13 chr2 47177645 47177909 -203509945 + L1ME1 LINE L1 2757 3042 -3104 * 729 210 45 52 chr2 47177904 47177974 -203509880 + L1ME1 LINE L1 3688 3757 -2389 1826 163 40 3 chr2 47177974 47178275 -203509579 + AluJb SINE Alu 1 312 0 729 210 45 52 chr2 47178275 47178471 -203509383 + L1ME1 LINE L1 3757 3952 -2194 477 191 9 0 chr2 47178475 47178590 -203509264 + MER53 DNA DNA 73 188 -1 2953 213 39 90 chr2 47178599 47180274 -203507580 + L1ME1 LINE L1 4565 6147 -19 223 303 26 4 chr2 47180361 47180452 -203507402 - MIR SINE MIR -60 148 55 2002 105 51 78 chr2 47180649 47180815 -203507039 + THE1B LTR MaLR 2 171 -193 2326 110 3 3 chr2 47180815 47181125 -203506729 + AluSp SINE Alu 1 310 -3 2002 105 51 78 chr2 47181125 47181331 -203506523 + THE1B LTR MaLR 171 364 0 304 353 0 26 chr2 47181482 47181598 -203506256 + MIR SINE MIR 28 140 -122 227 136 0 34 chr2 47181683 47181742 -203506112 - HsTC2 DNA Tc2 -1841 57 1 1565 191 23 53 chr2 47181788 47182091 -203505763 + AluJb SINE Alu 1 294 -18 1046 96 0 7 chr2 47182098 47182234 -203505620 + AluSq/x SINE Alu 1 135 -177 2237 110 0 0 chr2 47182234 47182526 -203505328 + AluSq SINE Alu 1 292 -21 219 283 142 25 chr2 47183118 47183238 -203504616 + MIR SINE MIR 19 152 -110 192 271 57 29 chr2 47183684 47183754 -203504100 - MIR SINE MIR -56 152 81 495 223 115 0 chr2 47184022 47184152 -203503702 - MER69A DNA AcHobo 0 177 33 444 37 0 0 chr2 47185475 47185529 -203502325 + (CA)n Simple_repeat Simple_repeat 1 54 0 1142 178 89 126 chr2 47185844 47186327 -203501527 - MER4C LTR ERV1 0 465 1 2288 106 0 0 chr2 47186613 47186916 -203500938 + AluY SINE Alu 1 303 -8 211 286 0 0 chr2 47187808 47187850 -203500004 - L2 LINE L2 -17 3255 3214 181 235 0 0 chr2 47187923 47187957 -203499897 + L2 LINE L2 3153 3186 -86 2044 276 128 16 chr2 47188512 47189598 -203498256 + L2 LINE L2 2094 3309 -4 768 234 11 0 chr2 47191499 47191683 -203496171 + MER105 DNA DNA 18 203 -1 393 221 44 57 chr2 47191688 47191846 -203496008 - L1MC/D LINE L1 -2018 5790 5635 296 301 80 9 chr2 47191856 47191969 -203495885 + L2 LINE L2 3183 3303 -10 397 233 139 16 chr2 47192601 47192730 -203495124 - MIR SINE MIR -65 197 53 362 204 153 19 chr2 47192786 47192943 -203494911 - HAL1 LINE L1 -196 2311 2134 25 0 0 0 chr2 47192952 47192977 -203494877 + AT_rich Low_complexity Low_complexity 1 25 0 1445 259 25 29 chr2 47193004 47193522 -203494332 + L1ME3A LINE L1 5647 6162 -8 414 192 7 68 chr2 47193623 47193769 -203494085 - HAL1b LINE L1 -522 826 690 616 138 17 0 chr2 47194009 47194125 -203493729 + CT-rich Low_complexity Low_complexity 4 121 0 237 258 32 40 chr2 47194152 47194276 -203493578 - HAL1b LINE L1 -1009 339 217 200 100 75 0 chr2 47194390 47194430 -203493424 + (CATTT)n Simple_repeat Simple_repeat 4 46 0 611 240 55 0 chr2 47194443 47194589 -203493265 + Charlie2b DNA MER1_type 2 155 -2627 4903 245 84 26 chr2 47194653 47196742 -203491112 + Charlie2b DNA MER1_type 317 2614 -168 1270 173 41 19 chr2 47196779 47197045 -203490809 - MER63C DNA MER1_type -406 524 253 249 249 77 94 chr2 47197338 47197554 -203490300 - L1MEc LINE L1 -4081 2315 2097 1523 140 27 23 chr2 47197554 47197811 -203490043 + AluJo SINE Alu 1 258 -54 249 249 77 94 chr2 47197811 47197828 -203490026 - L1MEc LINE L1 -4299 2097 2081 279 0 0 0 chr2 47197828 47197859 -203489995 + (CA)n Simple_repeat Simple_repeat 2 32 0 249 249 77 94 chr2 47197859 47198038 -203489816 - L1MEc LINE L1 -4315 2081 1909 1357 253 54 58 chr2 47198098 47198680 -203489174 - L1M4 LINE L1 -2470 3676 3095 2446 99 0 0 chr2 47198680 47198992 -203488862 - AluSx SINE Alu 0 312 1 1357 253 54 58 chr2 47198992 47199034 -203488820 - L1M4 LINE L1 -3051 3095 3054 344 229 104 48 chr2 47199483 47199846 -203488008 + L1MCc LINE L1 1299 1856 -4957 382 207 0 0 chr2 47199857 47199944 -203487910 + L1MA10 LINE L1 6229 6315 -19 456 334 133 8 chr2 47199959 47200321 -203487533 + HAL1 LINE L1 1472 1878 -629 372 324 0 49 chr2 47200724 47200866 -203486988 + HAL1b LINE L1 746 880 -468 200 122 24 0 chr2 47200868 47200909 -203486945 + (TA)n Simple_repeat Simple_repeat 2 43 0 212 175 0 0 chr2 47201061 47201101 -203486753 + A-rich Low_complexity Low_complexity 1 40 0 1642 204 0 3 chr2 47201575 47201859 -203485995 + AluJb SINE Alu 2 284 -28 399 195 0 35 chr2 47201973 47202086 -203485768 + L1MB8 LINE L1 6070 6178 0 653 308 73 35 chr2 47202370 47202948 -203484906 + HAL1b LINE L1 15 614 -734 566 294 88 45 chr2 47202988 47203526 -203484328 + L1M4 LINE L1 3052 3682 -2464 323 305 29 80 chr2 47203546 47203610 -203484244 + L1M4 LINE L1 3771 3837 -2309 2191 101 3 0 chr2 47203610 47203896 -203483958 + AluSx SINE Alu 20 306 -6 323 305 29 80 chr2 47203896 47204070 -203483784 + L1M4 LINE L1 3837 3997 -2149 608 298 49 22 chr2 47204120 47204626 -203483228 + L1M4 LINE L1 4067 4586 -1560 235 302 72 4 chr2 47204724 47204974 -203482880 + L1P LINE L1 4747 5013 -1133 21 36 0 0 chr2 47204990 47205018 -203482836 + AT_rich Low_complexity Low_complexity 1 28 0 307 375 128 16 chr2 47205238 47205481 -203482373 - L1MEd LINE L1 -5337 782 513 240 211 11 42 chr2 47205511 47205606 -203482248 - L1M4 LINE L1 -3180 2966 2875 216 0 0 0 chr2 47205626 47205650 -203482204 + (T)n Simple_repeat Simple_repeat 1 24 0 188 309 25 12 chr2 47206454 47206535 -203481319 + L2 LINE L2 2579 2660 -654 1735 177 39 15 chr2 47206721 47207055 -203480799 - MER2 DNA MER2_type -2 342 1 3377 208 12 26 chr2 47207338 47207362 -203480492 + L1MB8 LINE L1 3673 3696 -2450 2590 120 38 38 chr2 47207362 47207787 -203480067 - MSTB LTR MaLR -1 425 1 3377 208 12 26 chr2 47207787 47207888 -203479966 + L1MB8 LINE L1 3696 3797 -2349 2506 153 75 9 chr2 47207888 47208326 -203479528 - MLT1C LTR MaLR 0 467 1 3377 208 12 26 chr2 47208326 47209083 -203478771 + L1MB8 LINE L1 3797 4544 -1602 1879 169 9 18 chr2 47209087 47209430 -203478424 + MER2 DNA MER2_type 6 345 0 4458 180 62 20 chr2 47209433 47209592 -203478262 + L1MB8 LINE L1 4545 4696 -1482 2225 124 7 0 chr2 47209592 47209898 -203477956 + AluSg SINE Alu 3 310 0 4458 180 62 20 chr2 47209898 47210072 -203477782 + L1MB8 LINE L1 4696 4861 -1317 311 38 48 286 chr2 47210072 47210177 -203477677 + MADE1 DNA Mariner 1 80 0 4458 180 62 20 chr2 47210177 47210594 -203477260 + L1MB8 LINE L1 4861 5259 -919 2309 97 0 3 chr2 47210594 47210892 -203476962 + AluSg SINE Alu 1 297 -13 4458 180 62 20 chr2 47210892 47211704 -203476150 + L1MB8 LINE L1 5259 6178 0 358 349 109 5 chr2 47213372 47213564 -203474290 - L2 LINE L2 -171 3101 2890 394 204 30 76 chr2 47213598 47213730 -203474124 + MER112 DNA MER1_type 4 129 -131 220 241 121 0 chr2 47215557 47215615 -203472239 + L2 LINE L2 3203 3267 -5 789 143 15 30 chr2 47215987 47216120 -203471734 - FLAM_C SINE Alu -2 131 1 361 308 63 63 chr2 47216124 47216405 -203471449 - L1M4 LINE L1 -1443 4703 4420 2276 102 3 0 chr2 47216405 47216698 -203471156 - AluSc SINE Alu -15 294 1 361 308 63 63 chr2 47216698 47216715 -203471139 - L1M4 LINE L1 -1725 4421 4405 343 337 0 0 chr2 47216820 47216909 -203470945 - L2 LINE L2 0 3313 3225 2004 194 72 13 chr2 47217407 47217876 -203469978 + L2 LINE L2 2135 2631 -683 3177 258 92 27 chr2 47217878 47217918 -203469936 + L2 LINE L2 688 724 -2590 1337 156 148 0 chr2 47217918 47218168 -203469686 - AluJo SINE Alu -12 290 4 3177 258 92 27 chr2 47218168 47219219 -203468635 + L2 LINE L2 724 1851 -1463 238 257 9 64 chr2 47219359 47219468 -203468386 + L2 LINE L2 3134 3236 -77 287 270 0 45 chr2 47219501 47219590 -203468264 + L2 LINE L2 3185 3269 -3 249 337 11 0 chr2 47219603 47219692 -203468162 - MIR SINE MIR -65 143 54 439 195 12 0 chr2 47220323 47220405 -203467449 + MER94 DNA DNA 6 88 -46 299 219 37 49 chr2 47222457 47222539 -203465315 - L2 LINE L2 -8 3264 3184 401 290 77 35 chr2 47224939 47225108 -203462746 + MIR SINE MIR 22 197 -65 2343 81 7 0 chr2 47225596 47225891 -203461963 - AluY SINE Alu -14 297 1 450 246 130 0 chr2 47228248 47228386 -203459468 - MIR SINE MIR -21 241 86 1562 152 57 39 chr2 47229826 47230109 -203457745 - AluJo SINE Alu -23 289 2 243 257 164 26 chr2 47231310 47231462 -203456392 + MARNA DNA Mariner 259 431 -155 218 311 0 14 chr2 47231707 47231781 -203456073 - MIR SINE MIR -68 140 68 199 350 98 6 chr2 47232303 47232465 -203455389 - MIR SINE MIR -50 212 39 690 164 212 21 chr2 47232899 47233088 -203454766 - MIR SINE MIR 0 262 38 578 183 16 24 chr2 47233379 47233505 -203454349 + FLAM_A SINE Alu 2 126 -7 238 252 196 37 chr2 47235671 47235778 -203452076 - L2 LINE L2 0 3272 3149 633 254 198 0 chr2 47236360 47236608 -203451246 - L2 LINE L2 -847 2467 2171 1417 281 122 21 chr2 47236621 47237466 -203450388 + L2 LINE L2 2373 3311 -2 211 341 76 63 chr2 47237584 47237901 -203449953 - L2 LINE L2 -908 2406 2086 609 253 120 17 chr2 47239233 47239466 -203448388 + MIR SINE MIR 2 258 -4 219 315 56 37 chr2 47239710 47239818 -203448036 + L2 LINE L2 3184 3293 -20 31 0 0 0 chr2 47240081 47240112 -203447742 + AT_rich Low_complexity Low_complexity 1 31 0 319 0 0 0 chr2 47240569 47240604 -203447250 - U2 snRNA snRNA -153 35 1 329 302 121 0 chr2 47240833 47240949 -203446905 + L1ME LINE L1 5529 5658 -463 1841 118 21 18 chr2 47241152 47241431 -203446423 + AluJb SINE Alu 1 280 -32 23 0 0 0 chr2 47241608 47241631 -203446223 + AT_rich Low_complexity Low_complexity 1 23 0 1417 237 46 50 chr2 47241642 47242140 -203445714 + L1ME2 LINE L1 4065 4560 -1586 2501 201 83 49 chr2 47242159 47242699 -203445155 + L1ME2 LINE L1 5188 5782 -382 3705 164 81 45 chr2 47242699 47243531 -203444323 + MER21B LTR ERV1 1 862 -1 2501 201 83 49 chr2 47243531 47243918 -203443936 + L1ME2 LINE L1 5782 6154 -10 269 257 37 92 chr2 47243967 47244040 -203443814 + L1MC4 LINE L1 7836 7911 -131 1679 163 33 7 chr2 47244040 47244353 -203443501 + AluSx SINE Alu 1 320 0 269 257 37 92 chr2 47244353 47244496 -203443358 + L1MC4 LINE L1 7911 8041 -1 261 212 0 30 chr2 47245651 47245717 -203442137 + MLT1L LTR MaLR 548 611 -4 865 282 72 51 chr2 47245735 47245863 -203441991 + HAL1 LINE L1 1246 1370 -1137 2144 113 0 13 chr2 47245863 47246172 -203441682 + AluSx SINE Alu 7 311 -1 865 282 72 51 chr2 47246172 47246553 -203441301 + HAL1 LINE L1 1370 1766 -741 253 138 12 50 chr2 47246606 47246686 -203441168 + (TA)n Simple_repeat Simple_repeat 1 77 0 321 273 0 70 chr2 47246686 47246858 -203440996 + (TG)n Simple_repeat Simple_repeat 2 161 0 * 376 270 40 29 chr2 47246758 47246932 -203440922 + (TATG)n Simple_repeat Simple_repeat 3 178 0 * 448 245 0 62 chr2 47246879 47247137 -203440717 + (TA)n Simple_repeat Simple_repeat 1 241 0 225 194 21 75 chr2 47247149 47247242 -203440612 + L1MC4 LINE L1 6615 6702 -1340 304 206 0 61 chr2 47247243 47247423 -203440431 + (TATATG)n Simple_repeat Simple_repeat 2 170 0 311 194 0 55 chr2 47247423 47247645 -203440209 + (TA)n Simple_repeat Simple_repeat 1 209 0 247 211 13 13 chr2 47247707 47247783 -203440071 + (TATATG)n Simple_repeat Simple_repeat 5 80 0 31 58 0 0 chr2 47247785 47247837 -203440017 + AT_rich Low_complexity Low_complexity 1 52 0 1323 67 0 0 chr2 47247854 47248033 -203439821 + (GGAGA)n Simple_repeat Simple_repeat 1 179 0 337 256 44 44 chr2 47248655 47248835 -203439019 + L1MC4a LINE L1 5746 5925 -1883 1733 117 0 16 chr2 47248982 47249230 -203438624 - AluSx SINE Alu -8 304 61 299 271 107 65 chr2 47249389 47249699 -203438155 - L1M4 LINE L1 -1082 5064 4742 845 303 118 30 chr2 47250032 47250438 -203437416 + L2 LINE L2 2823 3264 -49 225 318 0 0 chr2 47250888 47250973 -203436881 + A-rich Low_complexity Low_complexity 1 85 0 820 144 103 0 chr2 47252361 47252507 -203435347 - MER5A DNA MER1_type 0 189 29 2198 188 60 103 chr2 47252621 47253072 -203434782 - HsTC2a DNA Tc2 -1161 739 270 677 33 0 33 chr2 47253072 47253164 -203434690 - L1PA5 LINE L1 0 6154 6066 2198 188 60 103 chr2 47253164 47253437 -203434417 - HsTC2a DNA Tc2 -1630 270 47 2414 90 0 0 chr2 47253437 47253748 -203434106 + AluY SINE Alu 1 311 0 2198 188 60 103 chr2 47253748 47253792 -203434062 - HsTC2a DNA Tc2 -1853 47 3 374 228 89 0 chr2 47254618 47254719 -203433135 - MER112 DNA MER1_type -2 258 149 264 256 11 44 chr2 47255410 47255500 -203432354 + L1ME LINE L1 5444 5530 -632 1351 185 63 24 chr2 47255669 47256048 -203431806 + L1 LINE L1 3389 3782 -2364 557 250 25 120 chr2 47256149 47256433 -203431421 - L1MC4 LINE L1 0 7847 7552 444 205 0 0 chr2 47256441 47256519 -203431335 + MLT1F LTR MaLR 1 78 -464 323 278 19 93 chr2 47257150 47257366 -203430488 + MLT1L LTR MaLR 383 582 -33 247 277 72 0 chr2 47257451 47257534 -203430320 - MIR SINE MIR -7 255 167 342 182 11 23 chr2 47257629 47257717 -203430137 + L1ME LINE L1 5736 5822 -299 12668 78 5 37 chr2 47257727 47259494 -203428360 + L1PA7 LINE L1 1 1710 -4751 * 17482 80 20 54 chr2 47259488 47260495 -203427359 + L1PA7 LINE L1 2452 3492 -2977 2204 48 0 8 chr2 47260495 47260763 -203427091 + AluY SINE Alu 16 281 -30 385 40 0 0 chr2 47260763 47260813 -203427041 + (TAAA)n Simple_repeat Simple_repeat 2 124 0 17482 80 20 54 chr2 47260813 47264001 -203423853 + L1PA7 LINE L1 3492 6469 0 1989 110 7 0 chr2 47264215 47264540 -203423314 - AluSp SINE Alu 0 327 1 268 308 8 58 chr2 47264645 47264765 -203423089 - L2 LINE L2 0 3272 3159 23 0 0 0 chr2 47264987 47265010 -203422844 + AT_rich Low_complexity Low_complexity 1 23 0 756 249 29 0 chr2 47265426 47265631 -203422223 + L1MA8 LINE L1 6080 6290 -1 3414 56 0 7 chr2 47266983 47267432 -203420422 - L1PA6 LINE L1 -1 6153 5708 478 355 43 34 chr2 47267450 47267777 -203420077 + L1MEc LINE L1 148 477 -5919 4950 218 71 26 chr2 47267994 47268656 -203419198 + L1M4 LINE L1 3510 4141 -2005 1868 160 41 22 chr2 47268656 47269024 -203418830 - THE1C LTR MaLR 0 375 1 4950 218 71 26 chr2 47269024 47269792 -203418062 + L1M4 LINE L1 4141 5004 -1142 838 236 0 0 chr2 47269792 47269957 -203417897 + AluSg/x SINE Alu 136 300 -12 607 215 37 6 chr2 47269972 47270135 -203417719 + L1M4 LINE L1 4990 5157 -989 1163 187 89 4 chr2 47270140 47270397 -203417457 + L1MC1 LINE L1 6046 6324 -9 1793 268 120 57 chr2 47270446 47271947 -203415907 + L1MEc LINE L1 707 2301 -4095 186 208 0 0 chr2 47273001 47273049 -203414805 + GA-rich Low_complexity Low_complexity 1 48 0 232 278 28 42 chr2 47273770 47273842 -203414012 + L2 LINE L2 3242 3312 -1 823 298 121 61 chr2 47275189 47275840 -203412014 - L2 LINE L2 -412 2902 2213 1218 184 9 5 chr2 47276335 47276552 -203411302 + AluJo SINE Alu 1 218 -94 261 0 0 0 chr2 47277762 47277791 -203410063 + (A)n Simple_repeat Simple_repeat 1 29 0 677 249 76 56 chr2 47278789 47279182 -203408672 + HAL1 LINE L1 1280 1680 -827 2222 94 7 3 chr2 47279380 47279679 -203408175 + AluSc SINE Alu 1 300 -9 478 299 140 18 chr2 47280372 47280536 -203407318 + MIR SINE MIR 18 201 -61 250 85 21 21 chr2 47285476 47285523 -203402331 + (GAAAA)n Simple_repeat Simple_repeat 3 49 0 24 0 0 0 chr2 47287966 47287990 -203399864 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 47290230 47290253 -203397601 + AT_rich Low_complexity Low_complexity 1 23 0 239 241 17 17 chr2 47291677 47291735 -203396119 + L3 LINE CR1 1516 1573 -4 253 339 36 18 chr2 47291953 47292065 -203395789 - MIR SINE MIR -147 115 2 1690 60 0 56 chr2 47294813 47295047 -203392807 + AluY SINE Alu 71 291 -20 441 0 0 0 chr2 47297212 47297261 -203390593 + (CA)n Simple_repeat Simple_repeat 2 50 0 1907 146 36 15 chr2 47297262 47297597 -203390257 + MER2 DNA MER2_type 2 343 -1 204 179 0 0 chr2 47297597 47297636 -203390218 + (TA)n Simple_repeat Simple_repeat 1 39 0 387 199 154 59 chr2 47298199 47298335 -203389519 - L2 LINE L2 0 3313 3165 237 263 300 0 chr2 47298996 47299076 -203388778 - MER5A DNA MER1_type -13 176 73 338 244 230 15 chr2 47299107 47299242 -203388612 + MER5A DNA MER1_type 25 188 -1 555 296 0 14 chr2 47299272 47299414 -203388440 - MER5A DNA MER1_type -49 140 1 421 265 73 53 chr2 47299410 47299561 -203388293 - MER5B DNA MER1_type -1 177 24 * 770 288 81 31 chr2 47300367 47300600 -203387254 - L1ME3 LINE L1 -222 5940 5720 1867 158 3 3 chr2 47300600 47300897 -203386957 - AluJo SINE Alu -13 299 3 770 288 81 31 chr2 47300897 47301470 -203386384 - L1ME3 LINE L1 -442 5720 5092 322 262 187 51 chr2 47303665 47303959 -203383895 - L1ME LINE L1 -381 5740 5407 2157 178 105 35 chr2 47304167 47304683 -203383171 + L1MB8 LINE L1 5618 6169 -9 846 206 18 18 chr2 47304686 47304856 -203382998 - FAM SINE Alu -5 170 1 441 323 92 19 chr2 47304962 47305278 -203382576 - L1ME3 LINE L1 -3662 2484 2146 646 274 106 31 chr2 47305637 47306089 -203381765 - HAL1 LINE L1 -742 1765 1280 414 272 131 39 chr2 47306251 47306534 -203381320 - HAL1 LINE L1 -1379 1128 820 1101 250 182 11 chr2 47307250 47307694 -203380160 + L2 LINE L2 2267 2786 -528 2161 126 0 0 chr2 47307916 47308210 -203379644 - AluSx SINE Alu -18 294 1 375 324 56 7 chr2 47308376 47308518 -203379336 + MIR3 SINE MIR 57 205 -3 827 194 7 7 chr2 47309770 47309925 -203377929 - FRAM SINE Alu -21 155 1 11251 117 21 3 chr2 47311034 47313023 -203374831 + Tigger1 DNA MER2_type 1 2025 -393 2090 179 40 14 chr2 47313017 47313441 -203374413 + Tigger1 DNA MER2_type 1912 2346 -72 * 2874 147 42 16 chr2 47313782 47314354 -203373500 + L1MB7 LINE L1 5593 6179 -5 341 283 152 42 chr2 47314419 47314656 -203373198 + L1M4 LINE L1 4091 4353 -1793 420 216 29 0 chr2 47314658 47314760 -203373094 + L1MA9 LINE L1 5980 6084 -228 297 0 0 0 chr2 47314825 47314858 -203372996 + (CA)n Simple_repeat Simple_repeat 2 34 0 1262 139 20 0 chr2 47314952 47315154 -203372700 + MER2 DNA MER2_type 1 206 -139 334 197 21 99 chr2 47316106 47316248 -203371606 + L1ME1 LINE L1 6031 6161 -5 1351 265 145 77 chr2 47316252 47316793 -203371061 - HAL1 LINE L1 -1509 998 366 2715 174 37 15 chr2 47316793 47317333 -203370521 - L1MB5 LINE L1 -8 6166 5615 1351 265 145 77 chr2 47317333 47317717 -203370137 - HAL1 LINE L1 -2141 366 10 2133 81 7 21 chr2 47318657 47318974 -203368880 + AluY SINE Alu 1 313 0 273 295 76 0 chr2 47318992 47319097 -203368757 + MIR SINE MIR 137 249 -13 2183 93 7 0 chr2 47319850 47320163 -203367691 - AluSg1 SINE Alu 0 315 1 316 330 10 10 chr2 47321918 47322015 -203365839 - MIR SINE MIR -151 111 15 22 56 0 0 chr2 47323855 47323891 -203363963 + AT_rich Low_complexity Low_complexity 1 36 0 2099 128 3 0 chr2 47324040 47324330 -203363524 - AluSx SINE Alu -19 293 3 2414 71 0 3 chr2 47324642 47324950 -203362904 - AluY SINE Alu -4 307 1 192 210 22 81 chr2 47325396 47325470 -203362384 - MIR SINE MIR -94 114 54 2067 127 10 10 chr2 47325740 47326047 -203361807 + AluSq SINE Alu 1 307 -6 242 313 10 0 chr2 47326124 47326223 -203361631 + L1ME LINE L1 5561 5660 -461 21 89 0 0 chr2 47326337 47326393 -203361461 + AT_rich Low_complexity Low_complexity 1 56 0 250 310 0 0 chr2 47328607 47328720 -203359134 + A-rich Low_complexity Low_complexity 1 113 0 781 180 87 0 chr2 47329663 47329824 -203358030 - MER5A DNA MER1_type 0 189 15 443 175 86 19 chr2 47329824 47329964 -203357890 - L1MB8 LINE L1 -1 6177 6035 1814 92 127 0 chr2 47329966 47330226 -203357628 + AluSx SINE Alu 1 293 -19 980 213 76 6 chr2 47330236 47330592 -203357262 - L1MB8 LINE L1 -640 5538 5164 7912 139 35 51 chr2 47330627 47332639 -203355215 - L1MA4 LINE L1 -12 6288 4325 1911 149 24 0 chr2 47332639 47332927 -203354927 - AluJb SINE Alu -17 295 1 7912 139 35 51 chr2 47332927 47333450 -203354404 - L1MA4 LINE L1 -1975 4325 3795 41 21 0 0 chr2 47333460 47333508 -203354346 + AT_rich Low_complexity Low_complexity 1 48 0 6739 98 16 3 chr2 47333527 47334467 -203353387 + L1P LINE L1 2 953 -5193 4612 49 3 12 chr2 47334467 47335055 -203352799 + L1PA5 LINE L1 5572 6154 0 730 219 7 13 chr2 47335060 47335211 -203352643 - AluJo SINE Alu -41 271 122 21 71 0 0 chr2 47335447 47335489 -203352365 + AT_rich Low_complexity Low_complexity 1 42 0 198 275 92 74 chr2 47337888 47338097 -203349757 - MIR SINE MIR -34 174 3 2214 111 3 9 chr2 47339647 47339962 -203347892 + AluSq SINE Alu 1 313 0 186 43 0 0 chr2 47340147 47340170 -203347684 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 24 77 0 0 chr2 47340333 47340385 -203347469 + AT_rich Low_complexity Low_complexity 1 52 0 2290 78 0 0 chr2 47341526 47341810 -203346044 + AluY SINE Alu 1 287 -24 438 20 0 0 chr2 47341810 47341861 -203345993 + (CA)n Simple_repeat Simple_repeat 2 52 0 1993 173 0 0 chr2 47341939 47342246 -203345608 - AluJo SINE Alu -5 307 1 247 51 0 51 chr2 47345266 47345305 -203342549 - tRNA-Cys-TGC tRNA tRNA -38 37 1 213 347 182 18 chr2 47346146 47346316 -203341538 + MIR SINE MIR 9 206 -56 788 257 129 0 chr2 47347413 47347623 -203340231 - MIR SINE MIR -10 252 16 511 248 0 47 chr2 47347703 47347832 -203340022 - MIR SINE MIR -133 129 7 23 33 0 0 chr2 47348331 47348361 -203339493 + AT_rich Low_complexity Low_complexity 1 30 0 270 303 30 10 chr2 47348738 47348837 -203339017 + HAL1b LINE L1 1210 1310 -38 325 222 33 33 chr2 47349106 47349196 -203338658 - L2 LINE L2 -33 3280 3191 535 273 76 17 chr2 47349636 47349808 -203338046 + HsTC2 DNA Tc2 509 690 -1208 504 247 82 39 chr2 47349813 47349924 -203337930 + HsTC2 DNA Tc2 1631 1736 -162 1435 197 24 31 chr2 47349924 47350214 -203337640 + AluJo SINE Alu 1 288 -24 504 247 82 39 chr2 47350214 47350357 -203337497 + HsTC2 DNA Tc2 1736 1896 -2 290 282 162 35 chr2 47350359 47350501 -203337353 - MIR SINE MIR -67 195 36 909 260 9 9 chr2 47352013 47352232 -203335622 - MIR SINE MIR -40 222 4 3635 142 72 24 chr2 47352653 47353386 -203334468 + LTR1B LTR ERV1 1 785 0 2408 135 12 95 chr2 47353453 47353498 -203334356 + L1MA8 LINE L1 5260 5307 -873 297 0 0 0 chr2 47353498 47353531 -203334323 + (CA)n Simple_repeat Simple_repeat 2 34 0 2408 135 12 95 chr2 47353531 47353922 -203333932 + L1MA8 LINE L1 5307 5641 -539 1853 152 0 10 chr2 47353922 47354211 -203333643 + AluJb SINE Alu 27 312 0 2408 135 12 95 chr2 47354211 47354344 -203333510 + L1MA8 LINE L1 5641 5783 -397 837 129 100 121 chr2 47354344 47354401 -203333453 + MER46A DNA MER2_type 2 59 -2672 1611 156 43 22 chr2 47354401 47354677 -203333177 - AluJb SINE Alu -18 294 13 837 129 100 121 chr2 47354677 47354785 -203333069 + MER46A DNA MER2_type 59 163 -2568 2327 134 60 29 chr2 47354785 47355202 -203332652 + Tigger2a DNA MER2_type 1 430 -4 837 129 100 121 chr2 47355202 47355275 -203332579 + MER46A DNA MER2_type 163 236 0 8408 217 39 20 chr2 47355287 47357685 -203330169 + L1MB7 LINE L1 2881 5325 -821 1137 146 73 20 chr2 47357691 47357937 -203329917 + L1MA8 LINE L1 6032 6290 -1 4124 156 54 30 chr2 47358009 47358845 -203329009 + L1MB7 LINE L1 5320 6175 -9 328 285 172 7 chr2 47358885 47359036 -203328818 + L1ME3A LINE L1 5727 5902 -268 323 319 38 32 chr2 47359601 47359758 -203328096 - L2 LINE L2 -180 3092 2935 966 251 68 8 chr2 47359797 47360032 -203327822 - MIR SINE MIR 0 262 14 21 0 0 0 chr2 47360266 47360287 -203327567 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 47361750 47361781 -203326073 + AT_rich Low_complexity Low_complexity 1 31 0 509 209 139 0 chr2 47363047 47363162 -203324692 + FLAM_A SINE Alu 1 131 -2 186 171 0 0 chr2 47364367 47364408 -203323446 + (CCA)n Simple_repeat Simple_repeat 2 42 0 401 266 86 0 chr2 47365964 47366103 -203321751 - MIR3 SINE MIR -6 202 52 2133 139 6 29 chr2 47366996 47367342 -203320512 - MER2 DNA MER2_type -2 343 6 1597 221 82 16 chr2 47367945 47368048 -203319806 - Charlie4a DNA MER1_type -1455 506 411 2352 100 0 13 chr2 47368048 47368357 -203319497 + AluSx SINE Alu 1 305 -7 1597 221 82 16 chr2 47368357 47368692 -203319162 - Charlie4a DNA MER1_type -1550 411 39 2422 207 52 51 chr2 47369277 47370189 -203317665 + L1ME3 LINE L1 5131 6038 -124 914 233 105 24 chr2 47370330 47370674 -203317180 + L1ME LINE L1 5191 5613 -549 267 31 0 0 chr2 47370822 47370854 -203317000 + (T)n Simple_repeat Simple_repeat 1 32 0 340 317 7 28 chr2 47372005 47372147 -203315707 - L2 LINE L2 0 3272 3134 2232 118 0 13 chr2 47372164 47372469 -203315385 - AluSx SINE Alu -11 301 1 280 245 7 77 chr2 47373112 47373242 -203314612 - MIR SINE MIR -65 143 20 1667 192 29 6 chr2 47373576 47373888 -203313966 - MER58B DNA MER1_type -2 339 21 1037 122 5 102 chr2 47373987 47374221 -203313633 - AluJb SINE Alu 0 350 136 2185 104 7 23 chr2 47374322 47374656 -203313198 + AluSg SINE Alu 1 329 0 198 300 138 0 chr2 47374656 47374736 -203313118 + MIR SINE MIR 117 207 -55 393 225 8 62 chr2 47374802 47374931 -203312923 + L2 LINE L2 3192 3313 0 559 169 55 164 chr2 47375778 47375961 -203311893 - AluSg/x SINE Alu -13 299 137 464 319 100 17 chr2 47376299 47376540 -203311314 + MIR SINE MIR 2 262 0 312 118 44 0 chr2 47379532 47379600 -203308254 + (TA)n Simple_repeat Simple_repeat 2 72 0 2364 85 0 0 chr2 47379612 47379918 -203307936 - AluY SINE Alu 0 306 1 201 352 55 28 chr2 47381148 47381330 -203306524 + L2 LINE L2 2567 2753 -561 209 108 27 0 chr2 47381398 47381435 -203306419 + (CA)n Simple_repeat Simple_repeat 2 39 0 230 220 0 40 chr2 47381777 47381877 -203305977 + (TGAA)n Simple_repeat Simple_repeat 1 96 0 2641 124 32 2 chr2 47382255 47382667 -203305187 + MSTA LTR MaLR 1 424 -4 180 0 0 0 chr2 47383603 47383623 -203304231 + (A)n Simple_repeat Simple_repeat 1 20 0 192 179 0 0 chr2 47383807 47383846 -203304008 + (TG)n Simple_repeat Simple_repeat 2 40 0 2269 111 60 23 chr2 47384974 47385325 -203302529 - THE1B LTR MaLR 0 364 1 641 280 118 24 chr2 47386908 47387533 -203300321 - L2 LINE L2 -3 3310 2567 1066 274 22 11 chr2 47388468 47388833 -203299021 + L1M4c LINE L1 1140 1508 -4876 7444 231 94 40 chr2 47388871 47391803 -203296051 + L1M4c LINE L1 2115 5318 -1064 1129 204 38 107 chr2 47391803 47392195 -203295659 + MLT1A1 LTR MaLR 1 365 0 7444 231 94 40 chr2 47392195 47392278 -203295576 + L1M4c LINE L1 5318 5395 -987 307 272 12 12 chr2 47392320 47392401 -203295453 - MIR SINE MIR -163 99 19 12235 177 46 26 chr2 47392917 47397338 -203290516 + L1M2 LINE L1 309 4821 -2027 872 134 0 8 chr2 47397338 47397472 -203290382 + MLT1A1 LTR MaLR 233 365 0 378 0 0 0 chr2 47397747 47397789 -203290065 + (TG)n Simple_repeat Simple_repeat 2 43 0 411 300 185 0 chr2 47400053 47400253 -203287601 + MIR SINE MIR 2 238 -24 1282 235 93 12 chr2 47400610 47400942 -203286912 + LTR16A LTR ERVL 89 447 -3 428 229 21 64 chr2 47401033 47401173 -203286681 - MER94 DNA DNA 0 134 1 2926 152 14 29 chr2 47401967 47402479 -203285375 - Tigger6b DNA MER2_type 0 1597 1094 * 4625 164 40 14 chr2 47402474 47403340 -203284514 - Tigger6b DNA MER2_type -707 890 2 991 269 99 12 chr2 47403362 47403696 -203284158 + MLT1I LTR MaLR 47 409 0 1873 123 48 7 chr2 47403912 47404205 -203283649 + MSTC LTR MaLR 118 422 -6 958 224 77 42 chr2 47404348 47404701 -203283153 - L1MC5 LINE L1 -440 7521 7157 580 233 143 36 chr2 47406230 47406453 -203281401 + MIR SINE MIR 16 262 0 694 235 114 43 chr2 47406780 47407061 -203280793 - MLT1K LTR MaLR -117 471 171 2269 163 53 9 chr2 47407836 47408285 -203279569 + L1MB1 LINE L1 4067 4535 -1611 1955 134 8 37 chr2 47408285 47408685 -203279169 - MER1B DNA MER1_type -1 338 1 4306 162 10 30 chr2 47408687 47409795 -203278059 + L1MB1 LINE L1 4529 5622 -546 1960 163 86 32 chr2 47409795 47410128 -203277726 + MSTA LTR MaLR 1 361 -67 2432 97 0 3 chr2 47410128 47410439 -203277415 - AluSg SINE Alu 0 310 1 1960 163 86 32 chr2 47410439 47410511 -203277343 + MSTA LTR MaLR 361 428 0 4306 162 10 30 chr2 47410511 47410601 -203277253 + L1MB1 LINE L1 5622 5712 -456 1000 159 6 31 chr2 47410601 47410764 -203277090 - MER1B DNA MER1_type -124 173 15 2225 141 50 21 chr2 47410764 47411183 -203276671 + L1MB1 LINE L1 5736 6166 -2 263 262 0 0 chr2 47412131 47412192 -203275662 + MIR SINE MIR 39 99 -109 437 248 69 14 chr2 47412472 47412617 -203275237 + MIR SINE MIR 108 260 -2 225 0 0 0 chr2 47413563 47413588 -203274266 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 388 300 0 0 chr2 47414344 47414444 -203273410 + MIR3 SINE MIR 109 208 0 424 298 115 5 chr2 47414531 47414749 -203273105 - MIR SINE MIR 0 262 21 2005 147 43 100 chr2 47414811 47415280 -203272574 + L1MB4 LINE L1 5715 6156 -24 2064 113 0 7 chr2 47415297 47415588 -203272266 + AluSp SINE Alu 1 289 -24 22 35 0 0 chr2 47415591 47415620 -203272234 + AT_rich Low_complexity Low_complexity 1 29 0 213 361 55 25 chr2 47415625 47415827 -203272027 - MIR SINE MIR -12 250 43 3161 106 82 0 chr2 47416432 47416905 -203270949 - MER75 DNA T2_type -2 512 1 577 306 65 16 chr2 47417340 47417588 -203270266 + MIR SINE MIR 2 261 -1 4704 159 27 26 chr2 47417857 47418692 -203269162 - L1MB8 LINE L1 -1 6177 5330 1960 137 13 33 chr2 47418692 47418998 -203268856 - AluJb SINE Alu -12 300 1 4704 159 27 26 chr2 47418998 47419182 -203268672 - L1MB8 LINE L1 -848 5330 5148 273 322 56 47 chr2 47419211 47419727 -203268127 + L1M4 LINE L1 4181 4701 -1445 350 327 62 12 chr2 47419744 47419906 -203267948 + MIR3 SINE MIR 30 199 -9 2203 135 33 28 chr2 47420354 47420716 -203267138 + THE1B LTR MaLR 1 364 0 2126 158 6 0 chr2 47422587 47422922 -203264932 + MER1B DNA MER1_type 1 337 0 1443 213 95 32 chr2 47423192 47423625 -203264229 - MLT1C LTR MaLR 0 467 8 620 189 0 19 chr2 47424173 47424279 -203263575 + MLT1E LTR MaLR 15 118 -475 1997 149 70 6 chr2 47424293 47424636 -203263218 - MLT1A1 LTR MaLR 0 365 1 569 231 63 93 chr2 47424639 47425099 -203262755 - LTR48B LTR ERV1 -11 596 126 371 204 126 39 chr2 47425070 47425173 -203262681 - MER34 LTR ERV1 -430 112 1 * 831 262 71 34 chr2 47425330 47425624 -203262230 + Charlie2b DNA MER1_type 1 305 -2477 8580 123 10 5 chr2 47425636 47426931 -203260923 - HSMAR2 DNA Mariner 0 1302 1 554 185 69 23 chr2 47426954 47427084 -203260770 + Charlie2b DNA MER1_type 534 669 -2113 3347 216 135 25 chr2 47427150 47427304 -203260550 + Charlie2a DNA MER1_type 1467 1603 -1259 180 0 0 0 chr2 47427304 47427324 -203260530 + (TG)n Simple_repeat Simple_repeat 2 21 0 3347 216 135 25 chr2 47427324 47427926 -203259928 + Charlie2a DNA MER1_type 1603 2137 -725 2301 91 0 0 chr2 47427926 47428213 -203259641 + AluSc SINE Alu 1 287 -22 3347 216 135 25 chr2 47428213 47428640 -203259214 + Charlie2a DNA MER1_type 2137 2782 -80 234 208 0 0 chr2 47429051 47429104 -203258750 + (CA)n Simple_repeat Simple_repeat 1 53 0 493 218 199 0 chr2 47431673 47431829 -203256025 - MIR SINE MIR -13 249 63 2175 116 0 0 chr2 47432107 47432392 -203255462 + AluSx SINE Alu 1 285 -27 870 119 0 0 chr2 47432392 47432526 -203255328 + (TA)n Simple_repeat Simple_repeat 2 135 0 1820 53 0 0 chr2 47432964 47433189 -203254665 + L1PA8 LINE L1 5948 6172 0 952 161 19 0 chr2 47435314 47435475 -203252379 - MER69A DNA AcHobo -13 164 1 2147 99 0 64 chr2 47435740 47436054 -203251800 + AluSq SINE Alu 1 294 -19 1484 148 32 25 chr2 47436075 47436359 -203251495 + L1MA6 LINE L1 6015 6300 0 695 301 72 32 chr2 47436557 47437462 -203250392 + L1M4 LINE L1 3767 4701 -1445 468 257 128 14 chr2 47438125 47438421 -203249433 + L1M4 LINE L1 4728 5057 -1089 417 254 101 22 chr2 47438442 47438678 -203249176 + L1M4 LINE L1 5110 5371 -780 6773 67 19 10 chr2 47438678 47439586 -203248268 + L1PA8 LINE L1 5257 6172 0 417 254 101 22 chr2 47439586 47439624 -203248230 + L1M4 LINE L1 5371 5405 -746 2587 241 41 24 chr2 47439691 47440678 -203247176 - L1MCc LINE L1 -4740 2201 1200 1077 283 99 35 chr2 47440692 47441179 -203246675 + MLT1L LTR MaLR 1 518 -97 353 250 50 43 chr2 47441594 47441734 -203246120 + L2 LINE L2 3173 3313 0 2084 120 0 19 chr2 47442330 47442639 -203245215 + AluSx SINE Alu 1 303 -9 455 192 10 20 chr2 47443904 47444003 -203243851 + MER5B DNA MER1_type 81 178 0 227 211 19 0 chr2 47444003 47444052 -203243802 + MIR3 SINE MIR 153 202 -6 353 282 55 0 chr2 47444162 47444272 -203243582 + MER117 DNA MER1_type 46 161 -36 594 209 241 27 chr2 47444367 47444846 -203243008 - MLT1H LTR MaLR -2 553 1 204 200 33 17 chr2 47444984 47445044 -203242810 + (CATATA)n Simple_repeat Simple_repeat 3 63 0 22 56 0 0 chr2 47445224 47445260 -203242594 + AT_rich Low_complexity Low_complexity 1 36 0 316 290 137 24 chr2 47445903 47446027 -203241827 - L2 LINE L2 -2 3270 3133 963 250 20 12 chr2 47446072 47446324 -203241530 - MIR SINE MIR 0 262 9 219 277 170 0 chr2 47446780 47446892 -203240962 - MIR SINE MIR -122 140 10 213 348 203 0 chr2 47447051 47447169 -203240685 + MIR3 SINE MIR 30 171 -37 1376 260 22 23 chr2 47448129 47448670 -203239184 + L2 LINE L2 2771 3310 -3 21 0 0 0 chr2 47451329 47451350 -203236504 + AT_rich Low_complexity Low_complexity 1 21 0 315 200 56 33 chr2 47453290 47453380 -203234474 - L2 LINE L2 -1 3271 3180 909 199 0 0 chr2 47453393 47453544 -203234310 + FRAM SINE Alu 11 161 -15 208 281 88 107 chr2 47453545 47453808 -203234046 - L2 LINE L2 -85 3187 2930 506 301 0 0 chr2 47455152 47455455 -203232399 + CT-rich Low_complexity Low_complexity 1 303 0 1030 181 81 136 chr2 47456984 47457476 -203230378 + MER4C LTR ERV1 1 465 0 2110 166 3 3 chr2 47457958 47458302 -203229552 - MER2 DNA MER2_type 0 344 1 2084 131 0 0 chr2 47458306 47458597 -203229257 - AluSx SINE Alu -13 299 9 355 262 78 7 chr2 47458974 47459115 -203228739 - MER103 DNA DNA -1 165 15 1890 117 80 0 chr2 47459249 47459523 -203228331 - AluSx SINE Alu -16 296 1 883 237 201 34 chr2 47459624 47460062 -203227792 + MLT1H LTR MaLR 23 533 -16 586 333 71 4 chr2 47460100 47460325 -203227529 + MIR SINE MIR 20 259 -3 352 319 126 10 chr2 47462875 47463082 -203224772 - MIR SINE MIR -30 232 2 257 185 37 0 chr2 47464860 47464914 -203222940 + MIR3 SINE MIR 101 156 -52 497 272 33 56 chr2 47464914 47465094 -203222760 + MER5B DNA MER1_type 3 178 0 317 159 16 0 chr2 47465886 47465949 -203221905 + CT-rich Low_complexity Low_complexity 1 64 0 1857 157 22 94 chr2 47467489 47467892 -203219962 + MLT2D LTR ERVL 1 371 -43 264 30 0 0 chr2 47467892 47467925 -203219929 + (CA)n Simple_repeat Simple_repeat 1 33 0 1857 157 22 94 chr2 47467925 47467967 -203219887 + MLT2D LTR ERVL 371 414 0 1133 158 0 113 chr2 47469070 47469317 -203218537 + AluJb SINE Alu 1 219 -93 222 37 0 0 chr2 47469373 47469400 -203218454 + (GGA)n Simple_repeat Simple_repeat 2 28 0 243 267 0 67 chr2 47469603 47469678 -203218176 - MER5A DNA MER1_type 0 189 120 220 250 103 86 chr2 47469609 47469725 -203218129 + MER5A DNA MER1_type 21 138 -51 * 567 298 50 11 chr2 47469972 47470153 -203217701 - MIR SINE MIR -12 250 63 332 343 14 43 chr2 47470163 47470303 -203217551 + L2 LINE L2 3134 3269 -3 219 338 0 12 chr2 47471365 47471445 -203216409 + MIR SINE MIR 17 95 -167 396 229 138 9 chr2 47471676 47471785 -203216069 + MIR SINE MIR 24 146 -116 354 235 105 14 chr2 47471814 47471964 -203215890 - L1M4 LINE L1 -754 5367 5200 306 237 144 49 chr2 47472533 47472698 -203215156 - MIR SINE MIR -56 206 31 250 180 0 0 chr2 47472702 47472752 -203215102 - L2 LINE L2 -2 3311 3262 192 200 71 86 chr2 47476369 47476439 -203211415 - MER5A DNA MER1_type -5 184 116 * 209 266 97 18 chr2 47476394 47476507 -203211347 + MER5B DNA MER1_type 31 152 -26 543 225 51 22 chr2 47477082 47477220 -203210634 + MIR SINE MIR 6 147 -115 483 224 13 17 chr2 47477234 47477394 -203210460 - MLT1I LTR MaLR -6 428 291 204 327 47 9 chr2 47477613 47477720 -203210134 + MIR SINE MIR 142 252 -10 227 279 0 15 chr2 47478108 47478176 -203209678 + MIR SINE MIR 121 187 -75 374 275 9 37 chr2 47478890 47478999 -203208855 - MIR SINE MIR 0 262 157 653 241 159 60 chr2 47479013 47479467 -203208387 + MLT1H LTR MaLR 1 555 0 333 297 10 10 chr2 47479467 47479568 -203208286 - MIR SINE MIR -116 146 46 1333 157 107 21 chr2 47480031 47480273 -203207581 - AluJo SINE Alu -49 263 1 2059 162 0 6 chr2 47480793 47481107 -203206747 - AluSx SINE Alu 0 312 1 305 289 0 0 chr2 47482414 47482490 -203205364 - MLT1A1 LTR MaLR -143 222 147 813 158 8 0 chr2 47483281 47483401 -203204453 + FLAM_C SINE Alu 1 121 -22 204 97 0 0 chr2 47483401 47483432 -203204422 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2651 99 6 3 chr2 47483984 47484338 -203203516 + THE1A LTR MaLR 1 355 0 389 94 0 0 chr2 47484338 47484391 -203203463 + THE1A-int LTR MaLR 1 53 -1527 499 33 0 0 chr2 47484391 47484452 -203203402 + THE1A-int LTR MaLR 22 82 -1498 2121 96 34 25 chr2 47484452 47484805 -203203049 + MLT2A1 LTR ERVL 89 444 0 577 155 0 43 chr2 47484962 47485078 -203202776 + MER53 DNA DNA 1 111 -78 219 309 12 24 chr2 47485139 47485223 -203202631 + L3 LINE CR1 1489 1571 -6 424 374 12 6 chr2 47486200 47486366 -203201488 + MIR SINE MIR 34 200 -62 1560 164 31 13 chr2 47486456 47486774 -203201080 + MER33 DNA MER1_type 1 324 0 339 273 27 31 chr2 47487018 47487141 -203200713 - MIR3 SINE MIR -21 187 65 243 394 84 36 chr2 47487770 47488021 -203199833 - L2 LINE L2 -65 3207 2945 2160 111 38 0 chr2 47488156 47488444 -203199410 - AluSx SINE Alu -13 299 1 212 266 86 70 chr2 47488501 47488629 -203199225 - MIR SINE MIR -70 192 63 207 261 0 22 chr2 47488846 47488892 -203198962 + L2 LINE L2 3238 3282 -31 2216 120 3 0 chr2 47489144 47489445 -203198409 - AluSx SINE Alu -4 308 7 1386 142 47 24 chr2 47489565 47489861 -203197993 + MER33 DNA MER1_type 22 324 0 621 0 0 0 chr2 47490290 47490359 -203197495 + (GA)n Simple_repeat Simple_repeat 1 69 0 211 317 178 0 chr2 47490703 47490804 -203197050 + L2 LINE L2 3143 3261 -11 595 279 13 32 chr2 47495337 47495495 -203192359 + MIR SINE MIR 105 259 -3 703 182 164 13 chr2 47495712 47495871 -203191983 - MER5A DNA MER1_type -6 183 1 383 245 32 0 chr2 47495881 47495975 -203191879 + L2 LINE L2 3207 3303 -10 733 124 11 40 chr2 47496388 47496565 -203191289 + (TTTC)n Simple_repeat Simple_repeat 3 174 0 517 207 0 9 chr2 47497151 47497267 -203190587 - L1MD3 LINE L1 -124 7871 7757 288 344 23 8 chr2 47497632 47497763 -203190091 + MIR3 SINE MIR 43 175 -33 2568 219 93 27 chr2 47498747 47499486 -203188368 - MER21B LTR ERV1 -57 806 19 372 207 9 95 chr2 47499484 47499600 -203188254 - MER21B LTR ERV1 -757 106 1 * 201 154 0 0 chr2 47499955 47499994 -203187860 + (TG)n Simple_repeat Simple_repeat 1 39 0 224 255 0 0 chr2 47500038 47500089 -203187765 + A-rich Low_complexity Low_complexity 1 51 0 237 262 121 64 chr2 47500458 47500599 -203187255 - MER5B DNA MER1_type -13 165 17 2425 90 0 13 chr2 47501107 47501417 -203186437 + AluY SINE Alu 1 306 -5 1020 211 56 17 chr2 47501418 47501650 -203186204 + MIR SINE MIR 22 262 0 186 236 0 0 chr2 47504952 47505007 -203182847 + (TGGA)n Simple_repeat Simple_repeat 1 55 0 258 247 62 93 chr2 47505061 47505223 -203182631 - L2 LINE L2 -8 3305 3149 1036 83 15 0 chr2 47505223 47505355 -203182499 + AluSq SINE Alu 1 134 -178 430 245 0 32 chr2 47505357 47505451 -203182403 + L1MC4 LINE L1 6614 6704 -1338 320 221 32 74 chr2 47505453 47505548 -203182306 + L1MC4 LINE L1 6614 6704 -1338 * 326 250 45 23 chr2 47505514 47505602 -203182252 - L1MC4 LINE L1 -1339 6703 6614 * 389 244 23 0 chr2 47505550 47505636 -203182218 + L1MC4 LINE L1 6614 6701 -1341 369 0 0 0 chr2 47505636 47505677 -203182177 + (CA)n Simple_repeat Simple_repeat 2 42 0 1328 105 0 0 chr2 47505677 47505849 -203182005 + AluSq SINE Alu 132 303 -10 3965 223 171 84 chr2 47505850 47507002 -203180852 - L2 LINE L2 -151 3162 2111 474 158 0 0 chr2 47507002 47507084 -203180770 + AluSp/q SINE Alu 227 308 -5 3965 223 171 84 chr2 47507084 47507837 -203180017 - L2 LINE L2 -1202 2111 1005 269 323 47 55 chr2 47508577 47508704 -203179150 + L2 LINE L2 3188 3313 0 * 342 294 171 35 chr2 47508701 47508929 -203178925 - MIR SINE MIR 0 262 4 230 274 159 72 chr2 47509401 47509455 -203178399 + MLT1J LTR MaLR 149 197 -314 819 209 181 0 chr2 47509455 47509637 -203178217 + MER20 DNA MER1_type 3 217 -2 230 274 159 72 chr2 47509637 47509759 -203178095 + MLT1J LTR MaLR 197 307 -204 2132 132 3 6 chr2 47509759 47510070 -203177784 + AluSg SINE Alu 1 310 0 230 274 159 72 chr2 47510070 47510169 -203177685 + MLT1J LTR MaLR 307 449 -62 2232 179 37 47 chr2 47510318 47510826 -203177028 + MLT1D LTR MaLR 1 503 -2 208 295 74 41 chr2 47511812 47511934 -203175920 - MIR3 SINE MIR -80 128 3 652 272 149 73 chr2 47512234 47512642 -203175212 + L2 LINE L2 2827 3265 -7 186 356 0 0 chr2 47512731 47512790 -203175064 + MIR SINE MIR 88 146 -116 254 306 74 50 chr2 47512799 47512920 -203174934 - L2 LINE L2 -8 3264 3141 2350 102 3 0 chr2 47512926 47513230 -203174624 + AluY SINE Alu 1 305 -6 665 273 12 8 chr2 47513285 47513538 -203174316 - L1M4 LINE L1 -1628 4518 4265 1135 96 32 0 chr2 47513542 47513699 -203174155 - L1PA13 LINE L1 0 6163 6002 268 337 104 26 chr2 47513737 47514007 -203173847 - L2 LINE L2 -173 3099 2809 1944 159 14 24 chr2 47516313 47516761 -203171093 - MLT1D LTR MaLR 0 505 1 570 232 166 52 chr2 47516897 47517337 -203170517 + L1ME4a LINE L1 5627 6116 -5 183 80 0 0 chr2 47517730 47517755 -203170099 + (A)n Simple_repeat Simple_repeat 1 25 0 274 289 36 67 chr2 47517833 47518027 -203169827 + L1ME4a LINE L1 5488 5675 -446 412 234 103 11 chr2 47518036 47518220 -203169634 + L1ME4a LINE L1 5776 5976 -145 2430 163 36 7 chr2 47519662 47520074 -203167780 + MSTB LTR MaLR 3 426 0 992 214 99 76 chr2 47520625 47520967 -203166887 - MER41B LTR ERV1 -29 606 257 225 246 0 33 chr2 47521595 47521656 -203166198 + GA-rich Low_complexity Low_complexity 6 64 0 247 320 7 3 chr2 47522726 47522877 -203164977 + MIR SINE MIR 58 259 -3 1819 133 23 10 chr2 47522879 47523179 -203164675 - AluSx SINE Alu -8 304 1 354 316 38 80 chr2 47523350 47523562 -203164292 + MIR SINE MIR 60 262 0 195 139 0 0 chr2 47525779 47525815 -203162039 + (CA)n Simple_repeat Simple_repeat 1 36 0 239 331 30 23 chr2 47528265 47528398 -203159456 + MIR3 SINE MIR 40 173 -35 581 237 171 7 chr2 47528411 47528563 -203159291 - MER5B DNA MER1_type 0 178 2 25 31 0 0 chr2 47529698 47529730 -203158124 + AT_rich Low_complexity Low_complexity 1 32 0 417 262 21 14 chr2 47529769 47529914 -203157940 + L1ME4a LINE L1 5955 6100 -21 329 184 0 13 chr2 47530607 47530683 -203157171 + CT-rich Low_complexity Low_complexity 2 76 0 352 283 20 113 chr2 47531231 47531478 -203156376 - MIR SINE MIR -10 252 29 746 303 92 7 chr2 47532157 47532451 -203155403 + L3 LINE CR1 1257 1575 -2 233 261 6 22 chr2 47533654 47533744 -203154110 + MIR SINE MIR 94 181 -62 302 133 0 0 chr2 47534238 47534283 -203153571 + MIR SINE MIR 99 143 -119 2069 156 21 16 chr2 47534450 47534823 -203153031 - THE1C LTR MaLR 0 375 1 203 293 57 9 chr2 47536403 47536509 -203151345 + L2 LINE L2 2952 3062 -210 270 302 119 14 chr2 47537066 47537470 -203150384 + L2 LINE L2 2809 3313 0 936 158 0 13 chr2 47537671 47537823 -203150031 + MIR SINE MIR 113 262 0 231 61 0 0 chr2 47538504 47538537 -203149317 + (TG)n Simple_repeat Simple_repeat 1 33 0 315 250 83 0 chr2 47538910 47538982 -203148872 + L2 LINE L2 3228 3305 -8 720 206 40 29 chr2 47539030 47539205 -203148649 + MIR SINE MIR 1 177 -85 3038 187 14 16 chr2 47539408 47539646 -203148208 + L1MB5 LINE L1 5408 5645 -529 2045 154 39 14 chr2 47539646 47540002 -203147852 - MLT1A1 LTR MaLR 0 365 1 3038 187 14 16 chr2 47540002 47540341 -203147513 + L1MB5 LINE L1 5645 5984 -190 717 174 90 0 chr2 47540438 47540582 -203147272 + L1MB5 LINE L1 6018 6174 0 577 261 36 46 chr2 47540739 47540934 -203146920 - MIR SINE MIR -47 215 23 2344 75 7 0 chr2 47541413 47541720 -203146134 + AluSp SINE Alu 1 309 -4 865 290 43 52 chr2 47542350 47542698 -203145156 - L3 LINE CR1 -15 1562 1218 276 120 0 0 chr2 47544609 47544659 -203143195 + (CAGC)n Simple_repeat Simple_repeat 4 53 0 1628 160 6 35 chr2 47544911 47545230 -203142624 + AluJo SINE Alu 1 310 -2 336 278 76 21 chr2 47545475 47545619 -203142235 + MER103 DNA DNA 5 156 -10 614 285 62 51 chr2 47548981 47549255 -203138599 - L2 LINE L2 -2 3270 2994 243 227 0 0 chr2 47549350 47549394 -203138460 + polypyrimidine Low_complexity Low_complexity 2 45 0 2388 28 0 0 chr2 47549505 47549787 -203138067 - AluYb8 SINE Alu 0 318 37 185 259 103 17 chr2 47549787 47549845 -203138009 - L2 LINE L2 -565 2749 2687 219 221 59 118 chr2 47553045 47553113 -203134741 - L2 LINE L2 -5 3308 3245 2221 97 0 0 chr2 47553176 47553475 -203134379 + AluSg SINE Alu 1 299 -11 372 188 38 0 chr2 47554273 47554353 -203133501 - L1MA10 LINE L1 0 6334 6252 1082 158 0 0 chr2 47554573 47554750 -203133104 - AluSg/x SINE Alu -2 310 134 1852 125 50 0 chr2 47554750 47555029 -203132825 - AluSq SINE Alu -20 293 1 488 244 148 19 chr2 47556572 47556781 -203131073 + MER112 DNA MER1_type 5 240 -20 289 362 26 0 chr2 47556810 47556926 -203130928 + MER91A DNA MER1_type 35 153 -43 876 187 0 23 chr2 47557664 47557835 -203130019 + AluJo SINE Alu 1 167 -145 335 312 122 14 chr2 47558504 47558725 -203129129 + L1MC/D LINE L1 4077 4321 -1825 254 316 18 0 chr2 47559038 47559152 -203128702 + L1P LINE L1 4904 5019 -1127 461 223 7 27 chr2 47559383 47559531 -203128323 + L1MC/D LINE L1 5254 5398 -2410 431 317 102 6 chr2 47559572 47559778 -203128076 + L1MC/D LINE L1 5486 5709 -461 21 36 0 0 chr2 47560415 47560443 -203127411 + AT_rich Low_complexity Low_complexity 1 28 0 46 54 0 0 chr2 47561656 47561730 -203126124 + AT_rich Low_complexity Low_complexity 1 74 0 1756 137 41 20 chr2 47561783 47562076 -203125778 + AluSg SINE Alu 1 299 -11 311 328 101 32 chr2 47562181 47562370 -203125484 - L1MC4a LINE L1 -1876 5932 5731 212 269 90 82 chr2 47564243 47564331 -203123523 - L2 LINE L2 -1 3271 3180 1535 210 106 7 chr2 47564331 47564754 -203123100 - MLT1C LTR MaLR 0 467 3 212 269 90 82 chr2 47564754 47564799 -203123055 - L2 LINE L2 -92 3180 3137 309 100 0 0 chr2 47564864 47564914 -203122940 + (CA)n Simple_repeat Simple_repeat 2 51 0 1955 138 7 0 chr2 47567647 47567943 -203119911 + AluSx SINE Alu 1 298 -14 1553 28 11 0 chr2 47568099 47568278 -203119576 - L1PA3 LINE L1 -3 6152 5972 753 192 0 0 chr2 47568282 47568412 -203119442 - FLAM_C SINE Alu -3 130 1 27 0 0 0 chr2 47568507 47568534 -203119320 + AT_rich Low_complexity Low_complexity 1 27 0 226 240 20 0 chr2 47570721 47570784 -203117070 + GA-rich Low_complexity Low_complexity 1 64 0 193 304 48 110 chr2 47572309 47572644 -203115210 - L2 LINE L2 -16 3256 2943 1630 237 55 20 chr2 47572803 47573254 -203114600 + MLT1C LTR MaLR 1 467 0 238 253 80 0 chr2 47573276 47573351 -203114503 + MIR SINE MIR 168 248 -14 213 178 0 0 chr2 47573480 47573525 -203114329 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 2094 109 20 0 chr2 47574063 47574367 -203113487 + AluSx SINE Alu 1 310 -2 298 308 103 26 chr2 47574494 47574650 -203113204 + MIR SINE MIR 90 257 -5 238 305 207 39 chr2 47575180 47575383 -203112471 - L3b LINE CR1 -194 1389 1153 1735 178 0 10 chr2 47575403 47575717 -203112137 + AluJo SINE Alu 1 311 -1 252 244 58 35 chr2 47576173 47576259 -203111595 - L2 LINE L2 0 3313 3226 225 289 227 0 chr2 47576739 47576867 -203110987 + MIR SINE MIR 95 251 -11 217 339 12 76 chr2 47577039 47577210 -203110644 + MIR SINE MIR 57 216 -46 254 210 99 62 chr2 47579018 47579099 -203108755 - MIR SINE MIR -113 149 66 190 206 0 0 chr2 47579188 47579222 -203108632 + L3 LINE CR1 1543 1576 -1 373 211 165 28 chr2 47579578 47579687 -203108167 - MIR SINE MIR -59 203 80 840 246 73 73 chr2 47580401 47580486 -203107368 + MLT1J2 LTR MaLR 1 85 -365 2445 96 48 25 chr2 47580486 47580842 -203107012 + THE1B LTR MaLR 1 364 0 840 246 73 73 chr2 47580842 47581086 -203106768 + MLT1J2 LTR MaLR 84 330 -120 270 267 58 58 chr2 47581523 47581643 -203106211 + MIR3 SINE MIR 45 164 -44 1918 102 60 3 chr2 47581964 47582247 -203105607 - AluSx SINE Alu -13 299 1 955 275 8 38 chr2 47582260 47582522 -203105332 - MIR SINE MIR -5 257 4 669 300 31 40 chr2 47583238 47583465 -203104389 + MIR SINE MIR 14 238 -24 1138 252 21 0 chr2 47583478 47583716 -203104138 + MIR SINE MIR 10 252 -10 1922 121 14 0 chr2 47583793 47584074 -203103780 - AluSc SINE Alu -24 285 1 2142 104 0 25 chr2 47584289 47584607 -203103247 - AluSq SINE Alu -3 310 1 180 265 0 20 chr2 47584614 47584663 -203103191 + L2 LINE L2 2695 2742 -572 305 291 150 86 chr2 47584791 47585118 -203102736 + L2 LINE L2 2923 3270 -2 256 337 12 0 chr2 47585197 47585283 -203102571 + MIR SINE MIR 54 140 -68 608 315 82 48 chr2 47586226 47586642 -203101212 - L2 LINE L2 -1 3312 2883 223 234 0 0 chr2 47586716 47586763 -203101091 + CT-rich Low_complexity Low_complexity 3 49 0 255 258 32 0 chr2 47587277 47587339 -203100515 - L2 LINE L2 0 3313 3250 1812 162 6 13 chr2 47588386 47588700 -203099154 + AluSx SINE Alu 1 312 0 765 156 16 0 chr2 47588705 47588885 -203098969 + GA-rich Low_complexity Low_complexity 1 182 0 2362 98 18 15 chr2 47588901 47589238 -203098616 - THE1C LTR MaLR -37 338 1 224 250 57 0 chr2 47589485 47589573 -203098281 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 1245 174 19 5 chr2 47590217 47590430 -203097424 - MER20 DNA MER1_type -2 217 2 2208 106 3 0 chr2 47590492 47590794 -203097060 - AluSc SINE Alu -6 303 1 472 241 62 7 chr2 47591035 47591180 -203096674 + MER103 DNA DNA 1 153 -13 856 205 6 12 chr2 47591910 47592076 -203095778 + AluJo SINE Alu 118 282 -30 254 95 24 0 chr2 47592081 47592123 -203095731 + (CAA)n Simple_repeat Simple_repeat 2 44 0 2283 99 0 0 chr2 47592979 47593282 -203094572 + AluSg SINE Alu 1 303 -7 424 180 112 11 chr2 47593345 47593434 -203094420 - MIR SINE MIR -116 146 49 1575 147 10 33 chr2 47593752 47594051 -203093803 + AluJo SINE Alu 11 302 -10 767 191 76 69 chr2 47594094 47594371 -203093483 - Charlie1b DNA MER1_type -6 517 239 21 0 0 0 chr2 47594371 47594392 -203093462 + AT_rich Low_complexity Low_complexity 1 21 0 240 57 0 0 chr2 47594393 47594428 -203093426 - L1PA6 LINE L1 -8 6146 6112 1147 215 56 0 chr2 47594428 47594661 -203093193 - Charlie1b DNA MER1_type -277 246 1 2089 104 10 3 chr2 47594971 47595270 -203092584 + AluSx SINE Alu 1 301 -11 2180 95 10 0 chr2 47595751 47596055 -203091799 - AluSq SINE Alu -6 307 1 14686 114 54 26 chr2 47596230 47597718 -203090136 + Tigger1 DNA MER2_type 22 1600 -818 2146 96 0 0 chr2 47597718 47597999 -203089855 + AluSc SINE Alu 16 296 -13 14686 114 54 26 chr2 47597999 47598842 -203089012 + Tigger1 DNA MER2_type 1600 2418 0 425 289 19 0 chr2 47599018 47599122 -203088732 + MIR SINE MIR 48 153 -109 2181 85 0 0 chr2 47599800 47600105 -203087749 - AluSg SINE Alu 0 305 1 25 0 0 0 chr2 47600445 47600470 -203087384 + AT_rich Low_complexity Low_complexity 1 25 0 340 183 134 12 chr2 47600736 47600818 -203087036 - MIR3 SINE MIR -1 207 116 421 324 110 27 chr2 47600895 47601114 -203086740 - MIR SINE MIR -24 238 2 1527 164 36 22 chr2 47602325 47602600 -203085254 - AluJo SINE Alu -23 289 11 1926 158 0 0 chr2 47602608 47602911 -203084943 - AluSx SINE Alu -8 304 2 221 302 75 38 chr2 47603659 47603765 -203084089 - MIR SINE MIR -64 144 35 1625 164 66 0 chr2 47603770 47604057 -203083797 - AluJb SINE Alu -6 306 1 225 308 0 0 chr2 47604753 47604805 -203083049 + L2 LINE L2 3019 3070 -202 705 192 19 108 chr2 47604913 47605076 -203082778 - MER105 DNA DNA -5 199 58 746 225 145 25 chr2 47605076 47605276 -203082578 - MER58A DNA MER1_type 0 224 1 705 192 19 108 chr2 47605276 47605326 -203082528 - MER105 DNA DNA -146 58 5 293 324 59 0 chr2 47605336 47605438 -203082416 + L2 LINE L2 3149 3256 -16 216 244 0 0 chr2 47605407 47605448 -203082406 + MIR SINE MIR 222 262 0 * 944 253 3 83 chr2 47605449 47605809 -203082045 - L2 LINE L2 0 3313 2983 2273 91 0 0 chr2 47606237 47606534 -203081320 + AluSc SINE Alu 1 297 -12 1202 252 82 21 chr2 47606852 47607229 -203080625 + LTR16A LTR ERVL 23 422 -28 626 272 94 38 chr2 47607535 47607748 -203080106 + MIR SINE MIR 1 225 -37 532 294 55 51 chr2 47608021 47608115 -203079739 - MIR SINE MIR -6 256 164 1816 164 7 0 chr2 47608115 47608413 -203079441 - AluSx SINE Alu -12 300 1 532 294 55 51 chr2 47608413 47608573 -203079281 - MIR SINE MIR -98 164 1 243 328 141 37 chr2 47609943 47610664 -203077190 + L2 LINE L2 2255 3056 -216 732 262 50 44 chr2 47611090 47611388 -203076466 - MLT1K LTR MaLR -55 533 234 262 261 0 31 chr2 47611410 47611475 -203076379 - MIR SINE MIR -64 144 82 1442 201 23 0 chr2 47611716 47612019 -203075835 + L1ME1 LINE L1 5857 6166 0 820 144 24 0 chr2 47612188 47612313 -203075541 + FLAM_A SINE Alu 1 128 -5 1203 162 34 19 chr2 47614184 47614449 -203073405 + L1MA9 LINE L1 5062 5330 -816 1011 131 26 0 chr2 47614450 47614603 -203073251 + FRAM SINE Alu 10 166 -10 5513 132 55 28 chr2 47614604 47615568 -203072286 + L1MA9 LINE L1 5323 6312 0 388 305 75 19 chr2 47616198 47616417 -203071437 + MIR SINE MIR 35 262 0 207 302 0 32 chr2 47616483 47616546 -203071308 + MER5B DNA MER1_type 7 67 -111 1250 38 11 27 chr2 47616566 47616749 -203071105 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1980 132 0 3 chr2 47616765 47617061 -203070793 - AluSx SINE Alu -17 295 1 233 340 10 10 chr2 47617064 47617161 -203070693 - MER5B DNA MER1_type -60 118 22 * 240 268 0 0 chr2 47617108 47617164 -203070690 + MER5A DNA MER1_type 116 171 -18 587 259 116 0 chr2 47618342 47618531 -203069323 + L2 LINE L2 2190 2400 -914 266 284 0 0 chr2 47618534 47618601 -203069253 + L2 LINE L2 3246 3312 -1 262 162 88 29 chr2 47618846 47618914 -203068940 - L1MB4 LINE L1 -262 5918 5847 4692 163 56 16 chr2 47619346 47620247 -203067607 - L1MB2 LINE L1 -7 6164 5228 464 296 18 24 chr2 47620355 47620524 -203067330 - MIR SINE MIR -60 202 35 2095 133 0 0 chr2 47621043 47621328 -203066526 - AluSx SINE Alu -13 299 15 275 289 214 25 chr2 47621804 47621963 -203065891 - MIR SINE MIR -70 192 4 1343 179 39 11 chr2 47622271 47622551 -203065303 - L1MB5 LINE L1 0 6174 5887 533 285 34 6 chr2 47622767 47622946 -203064908 + MIR SINE MIR 72 255 -7 223 285 57 36 chr2 47623156 47623349 -203064505 + L2 LINE L2 2824 3020 -252 * 241 194 167 0 chr2 47623342 47623414 -203064440 + MIR SINE MIR 119 202 -60 205 344 62 31 chr2 47623545 47623641 -203064213 + L2 LINE L2 3139 3237 -35 2808 20 0 0 chr2 47623962 47624268 -203063586 - AluYa5 SINE Alu -4 307 2 736 293 80 0 chr2 47624310 47624549 -203063305 - MIR SINE MIR -3 259 2 425 232 92 30 chr2 47624626 47624790 -203063064 + MIR3 SINE MIR 32 205 -3 568 199 5 86 chr2 47625321 47625507 -203062347 - MER5A DNA MER1_type -18 171 1 446 213 120 93 chr2 47625832 47626132 -203061722 - L1MC5 LINE L1 -50 7911 7604 2166 195 62 37 chr2 47628553 47629117 -203058737 + L1ME1 LINE L1 5551 6128 -38 1119 139 0 35 chr2 47629120 47629293 -203058561 + AluSx SINE Alu 1 167 -145 345 312 122 14 chr2 47629962 47630183 -203057671 + L1MC/D LINE L1 4077 4321 -1825 254 316 18 0 chr2 47630496 47630610 -203057244 + L1P LINE L1 4904 5019 -1127 481 223 7 27 chr2 47630841 47630989 -203056865 + L1MC/D LINE L1 5254 5398 -2410 436 317 102 6 chr2 47631030 47631236 -203056618 + L1MC/D LINE L1 5486 5709 -461 21 36 0 0 chr2 47631874 47631902 -203055952 + AT_rich Low_complexity Low_complexity 1 28 0 46 54 0 0 chr2 47633113 47633187 -203054667 + AT_rich Low_complexity Low_complexity 1 74 0 1870 137 41 20 chr2 47633240 47633533 -203054321 + AluSg SINE Alu 1 299 -11 1415 216 114 9 chr2 47635786 47636207 -203051647 - MLT1C LTR MaLR 0 467 3 405 0 0 0 chr2 47686294 47686339 -203001515 + (CA)n Simple_repeat Simple_repeat 2 46 0 258 371 64 14 chr2 47687631 47687771 -203000083 - L2 LINE L2 -30 3242 3096 210 312 112 48 chr2 47688053 47688178 -202999676 + MIR SINE MIR 51 183 -79 738 251 56 0 chr2 47688972 47689151 -202998703 - MER5A DNA MER1_type 0 189 1 580 250 155 0 chr2 47689166 47689314 -202998540 - MER5A DNA MER1_type -7 182 12 458 191 75 21 chr2 47689439 47689533 -202998321 + MER5B DNA MER1_type 74 172 -6 928 234 45 84 chr2 47689606 47689917 -202997937 + MLT1A1 LTR MaLR 1 296 -69 1775 179 0 6 chr2 47689917 47690229 -202997625 - AluJb SINE Alu -1 311 2 928 234 45 84 chr2 47690229 47690297 -202997557 + MLT1A1 LTR MaLR 296 365 0 211 293 0 17 chr2 47690307 47690365 -202997489 - MER5B DNA MER1_type -5 173 117 2226 90 0 13 chr2 47690382 47690394 -202997460 - AluY SINE Alu -5 306 295 180 77 0 0 chr2 47690394 47690420 -202997434 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2226 90 0 13 chr2 47690420 47690717 -202997137 - AluY SINE Alu -16 295 1 444 256 12 50 chr2 47690717 47690768 -202997086 + L1MC5 LINE L1 7759 7810 -151 1028 160 55 10 chr2 47690768 47690968 -202996886 - MER3 DNA MER1_type 0 209 1 444 256 12 50 chr2 47690968 47691076 -202996778 + L1MC5 LINE L1 7810 7912 -49 588 223 31 15 chr2 47691090 47691220 -202996634 + MER5B DNA MER1_type 47 178 0 239 327 85 18 chr2 47691730 47691953 -202995901 - L1MC4a LINE L1 -1855 5953 5716 660 264 36 26 chr2 47693496 47693689 -202994165 - L2 LINE L2 -2 3311 3117 188 250 68 0 chr2 47693915 47693959 -202993895 - MIR SINE MIR -86 122 76 1238 284 80 18 chr2 47694054 47694625 -202993229 + L1ME3 LINE L1 5289 5823 -339 270 73 0 0 chr2 47694625 47694666 -202993188 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1238 284 80 18 chr2 47694666 47694677 -202993177 + L1ME3 LINE L1 5823 5832 -330 2070 110 0 0 chr2 47694677 47694959 -202992895 - AluSx SINE Alu -30 282 1 1238 284 80 18 chr2 47694959 47694999 -202992855 + L1ME3 LINE L1 5832 5951 -211 22 0 0 0 chr2 47695434 47695456 -202992398 + AT_rich Low_complexity Low_complexity 1 22 0 521 246 17 0 chr2 47695823 47695941 -202991913 - L2 LINE L2 -2 3311 3192 577 292 76 89 chr2 47695942 47696006 -202991848 + Tigger8 DNA MER2_type 210 273 -393 875 159 0 0 chr2 47696006 47696138 -202991716 + FLAM_C SINE Alu 2 133 0 577 292 76 89 chr2 47696138 47696536 -202991318 + Tigger8 DNA MER2_type 273 666 0 4334 144 4 34 chr2 47696564 47697189 -202990665 + L1MA6 LINE L1 5553 6152 -148 2004 140 3 0 chr2 47697189 47697496 -202990358 + AluSx SINE Alu 2 309 -3 4334 144 4 34 chr2 47697496 47697632 -202990222 + L1MA6 LINE L1 6152 6291 -9 27 0 0 0 chr2 47697632 47697659 -202990195 + AT_rich Low_complexity Low_complexity 1 27 0 2219 107 0 0 chr2 47697942 47698252 -202989602 - AluSg SINE Alu 0 310 1 387 315 127 28 chr2 47698899 47699112 -202988742 + MIR SINE MIR 8 241 -21 1727 268 178 17 chr2 47700223 47701177 -202986677 - L2 LINE L2 -33 3280 2183 269 356 98 0 chr2 47701187 47701319 -202986535 - MIR3 SINE MIR -24 184 40 282 302 26 109 chr2 47701454 47701765 -202986089 + MER5C DNA MER1_type 37 321 -3 287 294 109 17 chr2 47702216 47702335 -202985519 + MIR SINE MIR 87 216 -46 345 196 206 11 chr2 47703774 47703866 -202983988 - MIR3 SINE MIR -23 185 76 228 322 116 15 chr2 47706026 47706162 -202981692 + MIR SINE MIR 32 186 -22 396 0 0 0 chr2 47707295 47707339 -202980515 + (TG)n Simple_repeat Simple_repeat 2 45 0 2394 57 0 3 chr2 47707639 47707938 -202979916 + AluY SINE Alu 1 298 -13 181 333 32 48 chr2 47707961 47708087 -202979767 - MIR3 SINE MIR -80 128 5 857 247 82 5 chr2 47709359 47709578 -202978276 - MIR SINE MIR -19 243 8 244 279 0 0 chr2 47710400 47710461 -202977393 - L2 LINE L2 -2 3311 3251 194 271 57 0 chr2 47714673 47714743 -202973111 - MIR SINE MIR -70 192 119 543 275 109 19 chr2 47715441 47715652 -202972202 - MIR SINE MIR -7 255 26 1946 123 0 7 chr2 47716404 47716696 -202971158 - AluSx SINE Alu -22 290 1 369 305 35 35 chr2 47717977 47718118 -202969736 + L2 LINE L2 3173 3313 0 294 331 54 15 chr2 47718396 47718526 -202969328 - MIR3 SINE MIR -14 194 60 331 297 79 0 chr2 47719130 47719231 -202968623 - MIR SINE MIR -67 195 87 200 306 34 68 chr2 47719366 47719513 -202968341 - L2 LINE L2 -8 3305 3164 2844 244 69 25 chr2 47719772 47719840 -202968014 - L1ME3A LINE L1 -5 6165 6101 1895 122 0 33 chr2 47719840 47720143 -202967711 - AluSx SINE Alu -19 293 1 2844 244 69 25 chr2 47720143 47720754 -202967100 - L1ME3A LINE L1 -69 6101 5413 2015 158 67 20 chr2 47720754 47721159 -202966695 - L1MB3 LINE L1 -9 6174 5751 2844 244 69 25 chr2 47721159 47721578 -202966276 - L1ME3A LINE L1 -757 5413 5014 2471 52 0 10 chr2 47721591 47721901 -202965953 - AluY SINE Alu -3 308 2 2074 132 0 0 chr2 47722493 47722789 -202965065 + AluSx SINE Alu 1 296 -16 1582 162 3 28 chr2 47722898 47723182 -202964672 + AluJb SINE Alu 1 277 -35 234 0 0 0 chr2 47723194 47723220 -202964634 + (CA)n Simple_repeat Simple_repeat 1 26 0 1968 129 14 0 chr2 47723631 47723926 -202963928 + AluSx SINE Alu 1 299 -13 2237 94 0 10 chr2 47725557 47725865 -202961989 + AluY SINE Alu 1 305 -6 273 221 142 79 chr2 47725903 47726030 -202961824 - MIR SINE MIR -15 247 113 368 239 0 0 chr2 47726452 47726544 -202961310 + MER94 DNA DNA 1 92 -42 331 304 98 9 chr2 47727324 47727436 -202960418 + L3 LINE CR1 1414 1535 -42 332 335 100 23 chr2 47727763 47728023 -202959831 + L2 LINE L2 2613 2892 -422 464 200 69 43 chr2 47728367 47728531 -202959323 - L1MCa LINE L1 -3888 2652 2487 341 277 104 24 chr2 47728723 47728954 -202958900 - L1MCa LINE L1 -891 2010 1515 348 311 126 44 chr2 47728976 47729392 -202958462 - L1MCa LINE L1 -4946 1584 1111 2354 179 38 7 chr2 47729392 47729839 -202958015 + LOR1b LTR ERV1 1 461 0 348 311 126 44 chr2 47729839 47729969 -202957885 - L1MCa LINE L1 -5419 1111 993 228 105 53 0 chr2 47730525 47730563 -202957291 - L1MB7 LINE L1 -214 5970 5931 3775 139 39 22 chr2 47730563 47730590 -202957264 - L1MA5A LINE L1 -2 6295 6270 2527 204 81 65 chr2 47730590 47731403 -202956451 + LTR1B LTR ERV1 1 826 0 3775 139 39 22 chr2 47731403 47732071 -202955783 - L1MA5A LINE L1 -27 6270 5588 239 259 19 0 chr2 47732264 47732318 -202955536 + L2 LINE L2 3242 3296 -17 2651 7 3 0 chr2 47732500 47732799 -202955055 + AluYa5 SINE Alu 1 300 -11 726 290 49 4 chr2 47733180 47733425 -202954429 - MIR SINE MIR -1 261 6 306 206 271 9 chr2 47735834 47735941 -202951913 + MIR SINE MIR 50 184 -78 237 243 81 81 chr2 47736031 47736142 -202951712 + MIR SINE MIR 37 147 -61 432 0 0 0 chr2 47736582 47736630 -202951224 + (TA)n Simple_repeat Simple_repeat 2 49 0 180 0 0 0 chr2 47736630 47736650 -202951204 + (TTG)n Simple_repeat Simple_repeat 2 21 0 231 222 0 19 chr2 47736666 47736720 -202951134 - L1MB7 LINE L1 -2059 5749 5697 265 269 67 40 chr2 47739051 47739200 -202948654 - LTR67 LTR ERVL -62 495 343 330 191 48 24 chr2 47739958 47740042 -202947812 + MER103 DNA DNA 79 164 -2 1856 115 77 3 chr2 47740093 47740379 -202947475 - AluSq SINE Alu -6 307 1 380 113 42 14 chr2 47740981 47741052 -202946802 + L1PB3 LINE L1 6081 6153 -1 237 299 52 87 chr2 47742337 47742762 -202945092 - L1ME LINE L1 -336 5785 5376 916 239 109 65 chr2 47742825 47743273 -202944581 + L1MC4 LINE L1 7451 7918 -124 207 148 33 16 chr2 47743303 47743364 -202944490 + (TA)n Simple_repeat Simple_repeat 2 63 0 1863 184 42 5 chr2 47743426 47743811 -202944043 - L1MB1 LINE L1 0 6168 5770 291 207 46 46 chr2 47744100 47744187 -202943667 - L1ME4a LINE L1 -44 6077 5991 2812 169 20 24 chr2 47744240 47745185 -202942669 - L1MB1 LINE L1 -544 5790 4846 1431 195 9 48 chr2 47745186 47745520 -202942334 + L1MB1 LINE L1 4521 4841 -1305 633 267 18 58 chr2 47747481 47747706 -202940148 + MIR SINE MIR 43 258 -4 1426 211 101 20 chr2 47747715 47748061 -202939793 - MLT1A2 LTR MaLR 0 374 1 239 333 42 42 chr2 47748372 47748540 -202939314 - MIR SINE MIR -70 192 25 441 0 0 0 chr2 47749273 47749322 -202938532 + (TG)n Simple_repeat Simple_repeat 2 50 0 1914 145 0 0 chr2 47749323 47749612 -202938242 - AluSx SINE Alu -23 289 1 1945 137 0 7 chr2 47749776 47750069 -202937785 + AluSx SINE Alu 7 297 -15 250 342 31 14 chr2 47750094 47750243 -202937611 - MIR SINE MIR -40 168 18 798 233 138 9 chr2 47753247 47753479 -202934375 - MIR SINE MIR 0 262 1 247 314 78 20 chr2 47754146 47754248 -202933606 - L2 LINE L2 -7 3265 3158 323 253 24 0 chr2 47756041 47756124 -202931730 + MIR SINE MIR 113 197 -65 2287 97 0 0 chr2 47756351 47756651 -202931203 - AluSx SINE Alu -12 300 1 382 265 66 11 chr2 47757576 47757718 -202930136 - MIR SINE MIR -74 134 7 816 311 84 43 chr2 47758129 47758734 -202929120 - L2 LINE L2 -869 2445 1816 22 35 0 0 chr2 47759830 47759859 -202927995 + AT_rich Low_complexity Low_complexity 1 29 0 210 71 0 0 chr2 47760245 47760273 -202927581 + (TCTCCC)n Simple_repeat Simple_repeat 6 33 0 1267 242 23 23 chr2 47760295 47760638 -202927216 - L1MC1 LINE L1 -6 6327 5985 390 229 165 0 chr2 47760640 47760749 -202927105 - MER115 DNA AcHobo -566 127 1 21 0 0 0 chr2 47762666 47762687 -202925167 + AT_rich Low_complexity Low_complexity 1 21 0 1142 228 191 50 chr2 47762819 47763284 -202924570 - MLT1F1 LTR MaLR -11 556 1 525 194 68 149 chr2 47763302 47763453 -202924401 + L2 LINE L2 3001 3163 -150 2167 108 0 23 chr2 47763453 47763760 -202924094 - AluSx SINE Alu -12 300 1 525 194 68 149 chr2 47763760 47763798 -202924056 + L2 LINE L2 3163 3202 -111 2040 137 7 0 chr2 47763798 47764105 -202923749 - AluSx SINE Alu -3 309 1 525 194 68 149 chr2 47764105 47764250 -202923604 + L2 LINE L2 3202 3309 -4 359 338 101 22 chr2 47764256 47764484 -202923370 - L1MC1 LINE L1 -1906 5902 5657 219 205 0 0 chr2 47765693 47765732 -202922122 + L2 LINE L2 3267 3305 -8 10935 183 55 45 chr2 47766916 47768068 -202919786 - L1MC1 LINE L1 -1 6612 5473 266 0 29 0 chr2 47768068 47768102 -202919752 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 10935 183 55 45 chr2 47768102 47770333 -202917521 - L1MC1 LINE L1 -1140 5473 3266 2388 115 0 0 chr2 47770333 47770645 -202917209 - AluSx SINE Alu 0 312 1 10935 183 55 45 chr2 47770645 47773789 -202914065 - L1MC1 LINE L1 -3347 3266 35 327 173 130 80 chr2 47773934 47774051 -202913803 + L1ME4a LINE L1 5934 6063 -58 180 0 0 0 chr2 47774051 47774071 -202913783 + (TA)n Simple_repeat Simple_repeat 2 21 0 327 173 130 80 chr2 47774071 47774115 -202913739 + L1ME4a LINE L1 6063 6103 -18 238 294 44 73 chr2 47776265 47776401 -202911453 - L2 LINE L2 -15 3298 3167 2359 96 0 0 chr2 47780365 47780656 -202907198 - AluSc SINE Alu -18 291 1 423 233 82 48 chr2 47781073 47781219 -202906635 + Charlie7 DNA MER1_type 2 152 -2460 2306 113 0 22 chr2 47781580 47781891 -202905963 + AluSx SINE Alu 1 304 -8 243 343 29 0 chr2 47784712 47784817 -202903037 - MIR3 SINE MIR -19 189 82 460 220 20 0 chr2 47785189 47785289 -202902565 + L1ME2 LINE L1 6056 6157 -7 1890 143 0 43 chr2 47785305 47785605 -202902249 - AluJb SINE Alu -24 288 2 2654 132 42 2 chr2 47785961 47786371 -202901483 - MSTB LTR MaLR 0 426 1 399 272 138 5 chr2 47786390 47786585 -202901269 - MIR SINE MIR -4 258 38 1818 159 30 43 chr2 47787901 47788297 -202899557 + L1MB8 LINE L1 5772 6162 -16 24 53 0 0 chr2 47788325 47788363 -202899491 + AT_rich Low_complexity Low_complexity 1 38 0 1849 155 3 7 chr2 47789162 47789452 -202898402 + AluJo SINE Alu 1 289 -23 970 277 110 24 chr2 47789618 47790501 -202897353 - L1ME3A LINE L1 -210 5960 5003 273 252 150 27 chr2 47791928 47792075 -202895779 + MER5A DNA MER1_type 14 189 0 2096 124 0 0 chr2 47792629 47792935 -202894919 - AluSx SINE Alu 0 308 3 242 324 14 0 chr2 47792981 47793052 -202894802 - MIR3 SINE MIR -45 163 92 239 311 41 16 chr2 47794017 47794139 -202893715 - MIR3 SINE MIR -15 193 69 576 260 12 12 chr2 47794474 47794643 -202893211 - MER5B DNA MER1_type -5 173 5 685 186 8 8 chr2 47796342 47796466 -202891388 + FLAM_A SINE Alu 1 124 -9 3404 211 40 36 chr2 47796613 47797201 -202890653 - L1ME1 LINE L1 -12 6154 5570 2125 124 0 16 chr2 47797201 47797507 -202890347 + AluSx SINE Alu 1 301 -11 3404 211 40 36 chr2 47797507 47798277 -202889577 - L1ME1 LINE L1 -596 5570 4787 1442 204 0 24 chr2 47798431 47798720 -202889134 + AluJo SINE Alu 1 282 -30 22 0 0 0 chr2 47798720 47798742 -202889112 + AT_rich Low_complexity Low_complexity 1 22 0 543 255 27 34 chr2 47798755 47798904 -202888950 + MER5A DNA MER1_type 42 189 0 264 59 0 0 chr2 47798995 47799029 -202888825 + (A)n Simple_repeat Simple_repeat 1 34 0 2413 88 3 0 chr2 47799032 47799337 -202888517 + AluY SINE Alu 1 306 -5 207 0 0 0 chr2 47799595 47799618 -202888236 + (TA)n Simple_repeat Simple_repeat 1 23 0 234 0 0 0 chr2 47799620 47799646 -202888208 + (T)n Simple_repeat Simple_repeat 1 26 0 186 43 0 0 chr2 47800696 47800719 -202887135 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 366 314 33 26 chr2 47800961 47801114 -202886740 + MIR SINE MIR 4 157 -105 1747 154 69 9 chr2 47801177 47801495 -202886359 - MER1B DNA MER1_type 0 337 1 293 247 11 56 chr2 47802137 47802226 -202885628 - MLT1F1 LTR MaLR -9 558 474 2357 90 3 0 chr2 47802485 47802786 -202885068 - AluSp SINE Alu -11 302 1 2269 109 0 0 chr2 47804098 47804400 -202883454 - AluSx SINE Alu -10 302 1 264 170 0 0 chr2 47805390 47805443 -202882411 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 193 299 0 15 chr2 47806446 47806513 -202881341 + L2 LINE L2 3244 3309 -4 207 210 12 99 chr2 47806886 47806967 -202880887 + MIR SINE MIR 46 119 -143 491 222 104 22 chr2 47807847 47807982 -202879872 + MER63 DNA MER1_type 1 772 -290 426 199 139 66 chr2 47808361 47808527 -202879327 + MER96B DNA MER1_type? 46 223 -194 192 261 0 0 chr2 47808591 47808637 -202879217 - MIR SINE MIR -73 135 90 587 112 127 11 chr2 47808958 47809040 -202878814 + L1P5 LINE L1 5698 5796 -358 180 0 0 0 chr2 47809040 47809060 -202878794 + (CA)n Simple_repeat Simple_repeat 2 21 0 587 112 127 11 chr2 47809060 47809083 -202878771 + L1P5 LINE L1 5796 5815 -339 198 0 0 0 chr2 47809346 47809368 -202878486 + (GGGTG)n Simple_repeat Simple_repeat 3 24 0 458 233 96 14 chr2 47809955 47810101 -202877753 - L1MC5 LINE L1 -37 7924 7767 2079 123 0 3 chr2 47810178 47810462 -202877392 - AluSx SINE Alu -29 283 1 2256 90 19 47 chr2 47813116 47813438 -202874416 - AluSq SINE Alu 0 313 1 199 193 54 47 chr2 47813688 47813778 -202874076 + MIR SINE MIR 63 143 -65 259 317 70 28 chr2 47814294 47814436 -202873418 + MIR SINE MIR 85 232 -30 2164 129 0 0 chr2 47814492 47814795 -202873059 - AluSx SINE Alu -5 307 5 329 254 82 27 chr2 47816020 47816130 -202871724 - FLAM_A SINE Alu -13 120 5 1571 199 21 7 chr2 47816582 47816868 -202870986 + AluJo SINE Alu 5 294 -18 22 35 0 0 chr2 47817230 47817259 -202870595 + AT_rich Low_complexity Low_complexity 1 29 0 1046 178 20 5 chr2 47817892 47818089 -202869765 - MLT1F1 LTR MaLR -367 200 1 191 305 84 0 chr2 47818790 47818885 -202868969 - L2 LINE L2 -34 3238 3136 2013 153 0 10 chr2 47819152 47819459 -202868395 - AluJb SINE Alu -8 304 1 3806 169 15 8 chr2 47819877 47820526 -202867328 + L1MB3 LINE L1 5477 6130 -53 367 233 85 92 chr2 47820598 47820869 -202866985 - L2 LINE L2 -36 3277 3009 424 248 85 7 chr2 47822622 47822775 -202865079 + MER103 DNA DNA 2 166 0 230 36 0 0 chr2 47823112 47823140 -202864714 - MER41B LTR ERV1 -129 506 479 655 152 67 49 chr2 47823276 47823440 -202864414 + MER53 DNA DNA 23 189 0 285 51 0 0 chr2 47823660 47823699 -202864155 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1662 142 0 0 chr2 47823702 47823955 -202863899 - AluSx SINE Alu -34 278 26 275 323 8 24 chr2 47827539 47827663 -202860191 + MIR SINE MIR 111 232 -30 180 244 0 0 chr2 47827688 47827733 -202860121 + MIR3 SINE MIR 159 203 -5 238 174 112 51 chr2 47828277 47828375 -202859479 - MER5A DNA MER1_type -77 112 9 195 340 97 21 chr2 47828971 47829115 -202858739 - MIR SINE MIR -50 212 58 259 378 160 5 chr2 47830282 47830470 -202857384 + MIR SINE MIR 46 262 0 254 254 164 64 chr2 47831539 47831649 -202856205 + MIR SINE MIR 67 187 -75 1889 143 0 10 chr2 47832932 47833226 -202854628 - AluJo SINE Alu -21 291 1 192 261 187 52 chr2 47833468 47833602 -202854252 - L2 LINE L2 0 3313 3162 237 311 158 0 chr2 47834064 47834254 -202853600 - L2 LINE L2 -882 2432 2213 580 168 37 9 chr2 47834711 47834818 -202853036 - AluSx SINE Alu -7 302 193 1055 104 0 0 chr2 47834819 47834963 -202852891 - AluSx SINE Alu -167 146 3 1352 189 23 43 chr2 47836017 47836318 -202851536 - AluJb SINE Alu -13 299 5 1463 115 23 5 chr2 47836528 47836745 -202851109 - pTR5 LTR ERV1 -2046 392 172 352 255 10 0 chr2 47836748 47836846 -202851008 - LTR30 LTR ERV1 -80 642 544 6038 108 48 63 chr2 47836846 47838014 -202849840 - pTR5 LTR ERV1 -413 2025 744 2903 151 91 14 chr2 47840093 47840677 -202847177 + L1MB8 LINE L1 5544 6172 -6 754 267 36 14 chr2 47841181 47841420 -202846434 - MIR SINE MIR 0 262 21 456 296 148 14 chr2 47844253 47844476 -202843378 + MIR SINE MIR 2 254 -8 2129 96 13 0 chr2 47845069 47845372 -202842482 - AluSq SINE Alu -6 307 1 255 31 0 0 chr2 47846452 47846484 -202841370 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 329 184 101 46 chr2 47846514 47846623 -202841231 - L1MC5 LINE L1 -30 7931 7817 1879 145 0 14 chr2 47847485 47847782 -202840072 + AluJo SINE Alu 1 293 -19 207 279 16 0 chr2 47848020 47848081 -202839773 + L2 LINE L2 2091 2152 -1162 1158 273 15 6 chr2 47848100 47848430 -202839424 - MER46C DNA MER2_type 0 338 6 1932 259 119 0 chr2 47848433 47849104 -202838750 + L2 LINE L2 2209 2959 -355 481 304 114 40 chr2 47849660 47850088 -202837766 - Tigger8 DNA MER2_type -204 462 3 972 107 0 0 chr2 47850161 47850301 -202837553 + AluSg/x SINE Alu 161 300 -12 267 241 17 0 chr2 47850577 47850635 -202837219 + MIR3 SINE MIR 105 163 -45 503 315 72 16 chr2 47850775 47851213 -202836641 - L1ME4a LINE L1 -157 5964 5495 2711 16 0 0 chr2 47851675 47851981 -202835873 + AluY SINE Alu 1 306 -5 216 0 0 0 chr2 47852177 47852201 -202835653 + (GA)n Simple_repeat Simple_repeat 1 24 0 824 253 172 30 chr2 47852247 47852753 -202835101 + HAL1 LINE L1 1049 1626 -881 273 176 42 133 chr2 47853175 47853340 -202834514 + HAL1b LINE L1 720 869 -479 409 270 99 26 chr2 47853487 47853720 -202834134 + HAL1 LINE L1 2225 2474 -33 22 56 0 0 chr2 47853750 47853786 -202834068 + AT_rich Low_complexity Low_complexity 1 36 0 2238 98 0 0 chr2 47854197 47854494 -202833360 - AluSg SINE Alu -13 297 1 263 247 13 52 chr2 47854692 47854769 -202833085 + MIR SINE MIR 95 168 -94 791 115 82 0 chr2 47854920 47855042 -202832812 + FLAM_C SINE Alu 2 133 0 186 303 68 45 chr2 47855204 47855336 -202832518 - L2 LINE L2 0 3272 3138 451 306 185 5 chr2 47855354 47855570 -202832284 - MIR SINE MIR -6 256 2 276 100 0 0 chr2 47856459 47856499 -202831355 + (TG)n Simple_repeat Simple_repeat 2 41 0 542 218 27 34 chr2 47856575 47856722 -202831132 - L1MC4a LINE L1 -1930 5878 5733 1829 231 58 24 chr2 47857156 47857477 -202830377 - L1ME1 LINE L1 -5 6161 5818 1737 153 27 13 chr2 47857477 47857778 -202830076 - AluJo SINE Alu -7 305 1 1829 231 58 24 chr2 47857778 47857920 -202829934 - L1ME1 LINE L1 -348 5818 5682 1997 141 0 0 chr2 47859143 47859440 -202828414 - AluSx SINE Alu -15 297 1 220 193 123 0 chr2 47859471 47859528 -202828326 - MER91C DNA MER1_type -42 98 35 723 145 38 8 chr2 47859627 47859758 -202828096 + FRAM SINE Alu 17 151 -25 199 361 0 0 chr2 47859765 47859837 -202828017 + MIR SINE MIR 141 212 -50 250 322 165 0 chr2 47860246 47860361 -202827493 + MIR SINE MIR 106 239 -23 809 143 86 0 chr2 47860520 47860660 -202827194 - FRAM SINE Alu -24 152 1 343 265 213 7 chr2 47860828 47860964 -202826890 - MIR SINE MIR -27 235 72 25 0 0 0 chr2 47861007 47861032 -202826822 + AT_rich Low_complexity Low_complexity 1 25 0 431 284 207 12 chr2 47861035 47861204 -202826650 - MIR SINE MIR -38 224 23 2199 156 39 34 chr2 47863035 47863583 -202824271 - MLT2A2 LTR ERVL 0 554 1 202 363 10 20 chr2 47863810 47863912 -202823942 - L2 LINE L2 -93 3179 3079 270 189 258 53 chr2 47864357 47864467 -202823387 + MIR SINE MIR 14 157 -105 1068 196 18 45 chr2 47864467 47864691 -202823163 - MER20 DNA MER1_type -1 218 1 270 189 258 53 chr2 47864691 47864712 -202823142 + MIR SINE MIR 157 172 -90 23 0 0 0 chr2 47866947 47866970 -202820884 + AT_rich Low_complexity Low_complexity 1 23 0 210 296 0 0 chr2 47867719 47867773 -202820081 + MIR3 SINE MIR 142 195 -13 268 265 183 40 chr2 47868575 47868773 -202819081 + MIR SINE MIR 15 251 -11 381 293 108 6 chr2 47869202 47869359 -202818495 - L3b LINE CR1 -295 1288 1116 2138 121 0 0 chr2 47870196 47870494 -202817360 - AluSx SINE Alu -12 300 3 491 273 0 8 chr2 47873189 47873317 -202814537 - L2 LINE L2 0 3313 3187 358 284 35 9 chr2 47874328 47874444 -202813410 - L2 LINE L2 -4 3268 3150 220 308 116 27 chr2 47874640 47874786 -202813068 - MIR SINE MIR -65 197 39 * 409 245 0 0 chr2 47874762 47874864 -202812990 - MER5A DNA MER1_type -79 110 9 213 314 20 20 chr2 47876155 47876257 -202811597 - L2 LINE L2 -83 3189 3088 706 303 26 35 chr2 47876666 47876976 -202810878 + L3 LINE CR1 1229 1535 -42 213 154 0 0 chr2 47927887 47927926 -202759928 + (TGGA)n Simple_repeat Simple_repeat 3 41 0 52 0 0 0 chr2 47928125 47928177 -202759677 + AT_rich Low_complexity Low_complexity 1 52 0 253 359 173 13 chr2 47928258 47928495 -202759359 + MLT1K LTR MaLR 27 301 -287 288 358 6 19 chr2 47929170 47929332 -202758522 + MIR SINE MIR 97 256 -6 1769 266 36 4 chr2 47930515 47931067 -202756787 + L1M4 LINE L1 2174 2743 -3403 261 301 41 0 chr2 47932399 47932472 -202755382 - MIR SINE MIR -174 88 13 371 331 54 11 chr2 47932675 47932859 -202754995 + MIR SINE MIR 13 204 -58 201 39 0 0 chr2 47932941 47932967 -202754887 + (TC)n Simple_repeat Simple_repeat 1 26 0 239 224 41 92 chr2 47932969 47933067 -202754787 - AluJ/FLAM SINE Alu -209 93 1 234 222 0 0 chr2 47933783 47933828 -202754026 + L2 LINE L2 3251 3295 -18 237 217 0 0 chr2 47933948 47933994 -202753860 - L2 LINE L2 -5 3267 3222 339 130 0 0 chr2 47934319 47934373 -202753481 + LTR50 LTR ERVL 5 58 -737 356 319 105 16 chr2 47934584 47934888 -202752966 - L2 LINE L2 -2964 350 20 410 0 0 20 chr2 47935383 47935434 -202752420 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1024 161 0 80 chr2 47935440 47935639 -202752215 - AluSc SINE Alu -35 274 92 1086 181 24 0 chr2 47935859 47936064 -202751790 - MER51A LTR ERV1 -424 210 1 213 182 0 0 chr2 47938401 47938456 -202749398 + CT-rich Low_complexity Low_complexity 1 55 0 261 281 11 0 chr2 47939573 47939662 -202748192 + L1ME3A LINE L1 5878 5967 -203 1674 154 75 7 chr2 47939700 47939980 -202747874 + AluJo SINE Alu 1 299 -13 1086 169 0 6 chr2 47939980 47940157 -202747697 + AluJb SINE Alu 134 309 -3 2279 111 0 0 chr2 47940730 47941036 -202746818 - AluSx SINE Alu -6 306 1 3304 62 21 0 chr2 47941474 47941897 -202745957 - L1PA13 LINE L1 -19 6144 5713 537 282 163 14 chr2 47941916 47942125 -202745729 - MIR SINE MIR -22 240 1 396 0 0 0 chr2 47944386 47944430 -202743424 + (TG)n Simple_repeat Simple_repeat 2 45 0 287 284 49 0 chr2 47944855 47944936 -202742918 + MIR SINE MIR 151 235 -27 298 265 225 0 chr2 47946222 47946373 -202741481 - MER5A DNA MER1_type -4 185 1 184 250 80 54 chr2 47946587 47946699 -202741155 - L2 LINE L2 -212 3060 2946 413 158 30 50 chr2 47947062 47947163 -202740691 + MIR SINE MIR 157 255 -7 945 283 76 32 chr2 47948578 47949051 -202738803 - L2 LINE L2 0 3313 2820 1704 146 0 47 chr2 47949088 47949389 -202738465 + AluJo SINE Alu 1 287 -25 228 282 0 0 chr2 47949469 47949540 -202738314 - L2 LINE L2 -227 3086 3016 185 309 55 86 chr2 47950611 47950831 -202737023 + MIR SINE MIR 7 219 -43 468 0 0 0 chr2 47951446 47951498 -202736356 + (CA)n Simple_repeat Simple_repeat 1 52 0 396 297 104 5 chr2 47951809 47952001 -202735853 + MIR SINE MIR 2 212 -50 24 0 0 0 chr2 47952388 47952412 -202735442 + AT_rich Low_complexity Low_complexity 1 24 0 194 295 0 78 chr2 47952877 47953006 -202734848 + L2 LINE L2 3153 3271 -1 255 202 73 55 chr2 47953210 47953319 -202734535 - MER5B DNA MER1_type -5 173 63 180 0 0 0 chr2 47957012 47957032 -202730822 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 448 322 22 6 chr2 47957833 47958013 -202729841 - MER112 DNA MER1_type -7 253 71 1914 147 29 16 chr2 47958390 47958697 -202729157 + AluSx SINE Alu 1 311 -1 268 247 79 11 chr2 47959227 47959316 -202728538 + MER5A DNA MER1_type 91 185 -4 342 295 9 9 chr2 47960964 47961069 -202726785 + MIR SINE MIR 42 146 -62 203 154 0 26 chr2 47964200 47964239 -202723615 - MIR SINE MIR -63 145 108 1867 140 83 14 chr2 47964524 47964875 -202722979 - THE1C LTR MaLR 0 375 1 2908 230 49 24 chr2 47965009 47965801 -202722053 + L1M4 LINE L1 4210 5021 -1125 3544 166 8 23 chr2 47966131 47966781 -202721073 - L1MB3 LINE L1 -8 6175 5536 493 298 0 6 chr2 47966888 47967049 -202720805 - MIR SINE MIR -8 254 95 258 336 103 0 chr2 47967118 47967234 -202720620 - MIR SINE MIR -65 143 16 184 191 0 43 chr2 47967387 47967434 -202720420 - L3 LINE CR1 -8 1569 1525 1822 177 148 81 chr2 47967434 47968130 -202719724 + LTR1B LTR ERV1 1 743 -83 264 214 71 111 chr2 47968366 47968463 -202719391 - L3 LINE CR1 -192 1385 1293 1965 138 3 10 chr2 47968463 47968759 -202719095 - AluJb SINE Alu -18 294 1 264 214 71 111 chr2 47968759 47968787 -202719067 - L3 LINE CR1 -284 1293 1265 * 298 252 191 26 chr2 47968786 47968901 -202718953 + MIR SINE MIR 10 143 -119 181 392 20 0 chr2 47969065 47969167 -202718687 - L3 LINE CR1 -407 1170 1067 257 184 0 0 chr2 47969734 47969783 -202718071 - MLT1G LTR MaLR -103 439 391 742 269 5 27 chr2 47969860 47970046 -202717808 - MLT1G LTR MaLR -286 304 123 1925 102 4 0 chr2 47970235 47970489 -202717365 - AluSx SINE Alu -16 296 42 236 227 0 0 chr2 47970897 47970941 -202716913 - MIR3 SINE MIR -20 188 145 204 40 0 0 chr2 47971487 47971512 -202716342 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1581 198 0 11 chr2 47971512 47971790 -202716064 - AluJb SINE Alu -33 279 5 746 184 13 40 chr2 47971853 47972005 -202715849 + AluJo SINE Alu 88 235 -77 519 149 18 0 chr2 47972005 47972088 -202715766 + AluJb SINE Alu 204 275 -27 823 162 28 7 chr2 47972476 47972618 -202715236 + FAM SINE Alu 20 164 -21 2231 131 0 0 chr2 47973546 47973858 -202713996 - AluSx SINE Alu 0 312 1 2017 159 0 6 chr2 47973893 47974207 -202713647 - AluJb SINE Alu 0 312 1 2196 105 13 19 chr2 47974621 47974958 -202712896 - AluSx SINE Alu 0 335 1 275 382 0 0 chr2 47974958 47975060 -202712794 - L2 LINE L2 -2 3270 3169 1674 96 181 0 chr2 47975465 47975725 -202712129 - AluSx SINE Alu -5 307 1 2512 87 3 0 chr2 47976796 47977105 -202710749 + AluSx SINE Alu 1 310 -2 195 133 0 0 chr2 47977310 47977340 -202710514 + L3b LINE CR1 1334 1363 -220 747 242 17 0 chr2 47981689 47981867 -202705987 + MER5A DNA MER1_type 9 189 0 2297 101 0 7 chr2 47983158 47983465 -202704389 + AluSc SINE Alu 1 305 -4 420 258 172 10 chr2 47983525 47983734 -202704120 + MIR SINE MIR 20 262 0 365 286 91 13 chr2 47984218 47984372 -202703482 - MIR SINE MIR -93 169 4 311 241 69 62 chr2 47985746 47985891 -202701963 + MER5A DNA MER1_type 18 163 -26 508 326 31 24 chr2 47985900 47986188 -202701666 - L3 LINE CR1 -39 1538 1249 192 77 0 0 chr2 47987192 47987218 -202700636 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 204 40 0 0 chr2 47987226 47987251 -202700603 + (A)n Simple_repeat Simple_repeat 1 25 0 2308 74 17 3 chr2 47987836 47988132 -202699722 - AluY SINE Alu -11 300 1 1771 168 0 27 chr2 47988255 47988553 -202699301 + AluJb SINE Alu 1 290 -22 2404 189 26 26 chr2 47989569 47989964 -202697890 + L1MA10 LINE L1 5770 6164 -170 234 91 0 0 chr2 47989964 47989997 -202697857 + (CA)n Simple_repeat Simple_repeat 1 33 0 180 0 0 0 chr2 47990001 47990021 -202697833 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2404 189 26 26 chr2 47990021 47990185 -202697669 + L1MA10 LINE L1 6166 6334 0 1798 166 0 36 chr2 47991043 47991351 -202696503 + AluJo SINE Alu 1 297 -15 2305 100 3 3 chr2 47991693 47991994 -202695860 + AluSc SINE Alu 1 301 -8 189 0 0 0 chr2 47992887 47992908 -202694946 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 255 310 18 18 chr2 47993332 47993445 -202694409 - L2 LINE L2 0 3313 3201 285 29 0 0 chr2 47993766 47993800 -202694054 + (CA)n Simple_repeat Simple_repeat 1 34 0 1569 162 70 7 chr2 47993800 47994071 -202693783 - AluJo SINE Alu -24 288 1 383 277 74 81 chr2 47994227 47994498 -202693356 - L2 LINE L2 -90 3182 2914 2035 124 21 0 chr2 47994610 47994893 -202692961 + AluSx SINE Alu 1 289 -23 477 303 176 44 chr2 47995020 47995638 -202692216 - L2 LINE L2 -695 2619 1920 398 256 57 95 chr2 47995682 47995753 -202692101 - MIR SINE MIR -50 212 140 2115 119 3 14 chr2 47995753 47996047 -202691807 - AluSx SINE Alu -21 291 1 398 256 57 95 chr2 47996047 47996186 -202691668 - MIR SINE MIR -122 140 10 679 200 74 17 chr2 47996431 47996606 -202691248 + MER5A DNA MER1_type 1 185 -4 607 199 15 0 chr2 47996717 47996848 -202691006 - MER5B DNA MER1_type 0 178 46 2333 99 7 0 chr2 47997238 47997540 -202690314 + AluSc SINE Alu 1 304 -5 1540 198 103 87 chr2 47998153 47998648 -202689206 - MLT1D LTR MaLR -2 503 1 207 308 55 11 chr2 47998648 47998739 -202689115 - MIR SINE MIR -72 136 42 222 128 0 0 chr2 47999927 47999966 -202687888 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 266 361 42 0 chr2 48000036 48000155 -202687699 + MIR3 SINE MIR 10 133 -75 254 227 45 15 chr2 48000163 48000229 -202687625 + MLT1D LTR MaLR 3 70 -435 1678 211 157 52 chr2 48000413 48001004 -202686850 - MLT1E1 LTR MaLR -1 653 1 225 261 139 28 chr2 48001865 48002080 -202685774 + L2 LINE L2 2014 2252 -1062 204 301 52 36 chr2 48002399 48002592 -202685262 + MER91A DNA MER1_type 1 196 0 355 238 57 16 chr2 48002817 48002939 -202684915 + L1MC5 LINE L1 7775 7901 -60 273 294 0 59 chr2 48002958 48003060 -202684794 - MER5A DNA MER1_type -51 138 43 368 292 23 31 chr2 48004423 48004553 -202683301 + MIR SINE MIR 126 254 -8 3530 240 66 50 chr2 48006131 48006323 -202681531 - HAL1 LINE L1 -2 2505 2318 901 214 0 12 chr2 48006323 48006491 -202681363 - FRAM SINE Alu 0 166 1 3530 240 66 50 chr2 48006491 48007237 -202680617 - HAL1 LINE L1 -189 2318 1538 2511 88 3 42 chr2 48007237 48007614 -202680240 + L1PA11 LINE L1 5813 6174 0 3530 240 66 50 chr2 48007614 48007943 -202679911 - HAL1 LINE L1 -969 1538 1216 1695 246 119 37 chr2 48007939 48008562 -202679292 - HAL1 LINE L1 -1730 777 104 * 373 239 34 17 chr2 48008656 48008773 -202679081 - MIR SINE MIR 0 262 144 415 338 31 4 chr2 48008907 48009135 -202678719 + MIR SINE MIR 23 256 -6 * 558 204 14 70 chr2 48009134 48009173 -202678681 + MIR3 SINE MIR 10 50 -158 2293 145 24 11 chr2 48009173 48009553 -202678301 + MLT1B LTR MaLR 5 389 -1 558 204 14 70 chr2 48009553 48009655 -202678199 + MIR3 SINE MIR 50 143 -65 2480 63 0 7 chr2 48010033 48010334 -202677520 + AluY SINE Alu 1 299 -12 781 261 32 20 chr2 48010982 48011231 -202676623 + MIR SINE MIR 11 262 0 483 292 45 13 chr2 48012721 48012875 -202674979 + MIR3 SINE MIR 7 165 -43 1823 163 13 3 chr2 48013658 48013964 -202673890 - AluSx SINE Alu -3 309 1 424 307 10 72 chr2 48013993 48014283 -202673571 - L2 LINE L2 -86 3186 2915 332 233 50 42 chr2 48014457 48014577 -202673277 - MIR3 SINE MIR -2 206 86 401 264 0 100 chr2 48014620 48014760 -202673094 + MER63 DNA MER1_type 2 753 -309 391 125 0 0 chr2 48014757 48014813 -202673041 + MER63 DNA MER1_type 978 1033 -29 * 654 205 146 27 chr2 48014813 48014998 -202672856 - MER63A DNA MER1_type -3 207 1 251 176 20 0 chr2 48015085 48015136 -202672718 + MIR SINE MIR 99 150 -112 6950 164 119 109 chr2 48015189 48015734 -202672120 - L1MC3 LINE L1 -7 7847 7309 250 284 20 20 chr2 48015734 48015836 -202672018 - MLT1F1 LTR MaLR -442 125 24 6950 164 119 109 chr2 48015836 48016330 -202671524 - L1MC3 LINE L1 -545 7309 6821 16208 131 39 19 chr2 48016330 48018996 -202668858 - Tigger2 DNA MER2_type 0 2718 1 6950 164 119 109 chr2 48018996 48019238 -202668616 - L1MC3 LINE L1 -1033 6821 6583 1776 180 2 89 chr2 48019238 48019665 -202668189 - MLT1B LTR MaLR 0 390 1 6950 164 119 109 chr2 48019665 48020158 -202667696 - L1MC3 LINE L1 -1271 6583 6096 480 50 0 0 chr2 48020158 48020218 -202667636 + Alu SINE Alu 2 61 -249 6950 164 119 109 chr2 48020218 48020720 -202667134 - L1MC3 LINE L1 -1758 6096 5364 1300 181 87 14 chr2 48020720 48021007 -202666847 - AluJo SINE Alu -4 308 1 6950 164 119 109 chr2 48021007 48021135 -202666719 - L1MC3 LINE L1 -2490 5364 5239 1426 221 36 21 chr2 48021130 48021460 -202666394 + L1PB4 LINE L1 5821 6155 -1 * 10507 227 19 49 chr2 48021459 48024110 -202663744 - L1MC3 LINE L1 -962 5253 2523 3437 171 56 16 chr2 48024110 48024793 -202663061 - L1MB8 LINE L1 0 6178 5469 10507 227 19 49 chr2 48024793 48025276 -202662578 - L1MC3 LINE L1 -3692 2523 2027 278 80 20 0 chr2 48025276 48025326 -202662528 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1997 112 0 14 chr2 48025330 48025616 -202662238 - AluSx SINE Alu -30 282 1 10507 227 19 49 chr2 48025616 48025688 -202662166 - L1MC3 LINE L1 -3987 2228 2155 258 263 13 0 chr2 48025703 48025779 -202662075 - HsTC2 DNA Tc2 -1819 79 3 332 314 48 9 chr2 48025783 48025888 -202661966 + MIR SINE MIR 152 260 -2 396 303 56 6 chr2 48026066 48026228 -202661626 + MIR SINE MIR 14 183 -79 2382 80 0 6 chr2 48027204 48027515 -202660339 - AluY SINE Alu -2 309 1 356 256 16 50 chr2 48029959 48030080 -202657774 + MARNA DNA Mariner 23 139 -447 544 265 152 10 chr2 48030370 48030574 -202657280 + MIR SINE MIR 30 262 0 191 274 21 84 chr2 48030546 48030641 -202657213 + L2 LINE L2 3215 3303 -10 * 273 241 0 48 chr2 48031440 48031523 -202656331 + L3b LINE CR1 1306 1384 -199 1191 142 9 53 chr2 48033037 48033263 -202654591 + MER20 DNA MER1_type 2 217 -2 574 227 128 44 chr2 48034782 48034985 -202652869 - L1ME3 LINE L1 0 6162 5943 2077 118 13 0 chr2 48035018 48035324 -202652530 - AluSx SINE Alu -2 310 1 403 307 87 35 chr2 48035452 48035683 -202652171 - MIR SINE MIR 0 262 20 261 0 0 0 chr2 48036011 48036040 -202651814 + (T)n Simple_repeat Simple_repeat 1 29 0 186 43 0 0 chr2 48036277 48036300 -202651554 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1819 148 11 0 chr2 48036304 48036582 -202651272 - AluSx SINE Alu -31 281 1 2154 112 0 0 chr2 48036839 48037135 -202650719 + AluSx SINE Alu 1 296 -16 571 268 88 59 chr2 48039018 48039357 -202648497 - L2 LINE L2 -1 3271 2923 229 296 102 37 chr2 48040533 48040641 -202647213 - LTR67 LTR ERVL -7 550 436 605 262 34 0 chr2 48041149 48041298 -202646556 - MIR SINE MIR -6 256 103 511 263 11 69 chr2 48041797 48041985 -202645869 + MIR SINE MIR 32 210 -52 429 268 155 18 chr2 48042191 48042359 -202645495 + L2 LINE L2 3123 3313 0 240 202 28 56 chr2 48043052 48043230 -202644624 + (TA)n Simple_repeat Simple_repeat 1 173 0 197 32 0 32 chr2 48044763 48044794 -202643060 + (TTA)n Simple_repeat Simple_repeat 2 31 0 246 302 93 50 chr2 48046115 48046254 -202641600 + L2 LINE L2 3047 3191 -81 258 299 126 70 chr2 48046491 48046762 -202641092 - L2 LINE L2 -17 3296 3011 217 319 185 0 chr2 48047188 48047307 -202640547 - L2 LINE L2 -471 2843 2703 351 297 59 0 chr2 48047431 48047532 -202640322 - MIR3 SINE MIR -16 192 86 546 300 70 22 chr2 48048132 48048362 -202639492 + MIR SINE MIR 1 241 -21 243 0 0 0 chr2 48048543 48048570 -202639284 + (T)n Simple_repeat Simple_repeat 1 27 0 205 342 108 9 chr2 48049335 48049446 -202638408 + MIR SINE MIR 100 221 -41 441 276 150 18 chr2 48049882 48050067 -202637787 - MIR SINE MIR -27 235 29 1862 119 16 40 chr2 48050266 48050569 -202637285 + AluSx SINE Alu 2 297 -15 365 212 59 51 chr2 48051171 48051289 -202636565 + MIR SINE MIR 67 185 -77 805 146 36 170 chr2 48051441 48051694 -202636160 + MER20 DNA MER1_type 1 219 0 385 321 95 13 chr2 48051885 48052163 -202635691 + L1MC4a LINE L1 4042 4339 -1807 21 0 0 0 chr2 48052214 48052235 -202635619 + AT_rich Low_complexity Low_complexity 1 21 0 275 221 58 0 chr2 48052440 48052526 -202635328 + L1MC4 LINE L1 6613 6703 -1339 248 163 0 0 chr2 48052484 48052533 -202635321 - L1MC4 LINE L1 -1339 6703 6655 * 688 212 142 40 chr2 48052556 48052782 -202635072 - MLT1J LTR MaLR -262 249 1 1500 289 121 29 chr2 48052782 48054404 -202633450 + L1MC4a LINE L1 4422 5398 -748 1998 148 0 0 chr2 48058386 48058690 -202629164 + AluJb SINE Alu 5 308 -4 348 366 139 3 chr2 48059130 48059439 -202628415 - L2 LINE L2 -5 3267 2917 184 262 204 29 chr2 48059453 48059556 -202628298 + L2 LINE L2 3150 3270 -2 194 303 79 0 chr2 48059571 48059647 -202628207 - L2 LINE L2 -325 2947 2866 343 286 8 40 chr2 48060429 48060555 -202627299 + MIR SINE MIR 135 256 -6 335 284 8 60 chr2 48060664 48060798 -202627056 + MIR SINE MIR 90 216 -46 27 29 0 0 chr2 48062378 48062412 -202625442 + AT_rich Low_complexity Low_complexity 1 34 0 345 117 0 0 chr2 48062491 48062551 -202625303 + (TA)n Simple_repeat Simple_repeat 2 61 0 1837 156 24 0 chr2 48062657 48062946 -202624908 - AluJb SINE Alu -16 296 1 406 131 0 0 chr2 48063070 48063131 -202624723 - MER92C LTR ERV1 -2 552 492 292 196 128 74 chr2 48063208 48063356 -202624498 - MER92C LTR ERV1 -384 170 15 396 0 0 0 chr2 48064077 48064121 -202623733 + (CA)n Simple_repeat Simple_repeat 2 45 0 270 325 31 49 chr2 48064672 48064835 -202623019 - MIR SINE MIR -90 172 13 2097 121 0 0 chr2 48065013 48065310 -202622544 - AluSx SINE Alu -15 297 1 346 183 0 14 chr2 48065310 48065373 -202622481 + MER113 DNA MER1_type? 126 189 -332 2138 91 11 0 chr2 48065386 48065671 -202622183 - AluSq SINE Alu -21 292 5 295 250 0 26 chr2 48065801 48065877 -202621977 + CT-rich Low_complexity Low_complexity 3 76 0 417 281 74 33 chr2 48065877 48065998 -202621856 - L2 LINE L2 0 3272 3147 35 0 0 0 chr2 48065998 48066033 -202621821 + AT_rich Low_complexity Low_complexity 1 35 0 215 132 0 0 chr2 48066097 48066135 -202621719 - L2 LINE L2 0 3313 3276 664 281 239 3 chr2 48066145 48066526 -202621328 - L2 LINE L2 0 3313 2843 2322 81 0 0 chr2 48066552 48066913 -202620941 - AluSg SINE Alu 0 361 1 213 270 0 0 chr2 48067267 48067330 -202620524 + (CACCC)n Simple_repeat Simple_repeat 4 66 0 587 341 26 15 chr2 48067545 48067818 -202620036 + L2 LINE L2 3029 3304 -9 305 232 32 56 chr2 48067985 48068110 -202619744 - Charlie8 DNA MER1_type -2257 160 39 434 293 119 76 chr2 48068333 48068743 -202619111 + L2 LINE L2 2243 2634 -679 895 0 10 0 chr2 48068743 48068846 -202619008 + L1PA2 LINE L1 6052 6155 0 434 293 119 76 chr2 48068846 48069300 -202618554 + L2 LINE L2 2634 3227 -86 228 270 135 75 chr2 48069623 48069875 -202617979 - L1MC4a LINE L1 -1671 6137 5871 843 199 112 53 chr2 48070200 48070406 -202617448 + MER20 DNA MER1_type 1 218 -1 208 260 375 0 chr2 48070722 48070818 -202617036 - MER91C DNA MER1_type -1 139 8 245 344 201 6 chr2 48070873 48071187 -202616667 - L2 LINE L2 -2 3270 2896 808 234 75 15 chr2 48072060 48072261 -202615593 + MIR SINE MIR 22 234 -28 456 223 98 36 chr2 48072839 48073032 -202614822 - MER113 DNA MER1_type? -299 222 18 192 77 0 0 chr2 48073678 48073704 -202614150 + (TGGGGG)n Simple_repeat Simple_repeat 5 30 0 254 272 65 98 chr2 48079420 48079537 -202608317 + MIR SINE MIR 79 189 -73 1897 152 0 0 chr2 48079537 48079827 -202608027 + AluJb SINE Alu 1 290 -22 254 272 65 98 chr2 48079827 48079893 -202607961 + MIR SINE MIR 189 256 -6 458 291 107 15 chr2 48079993 48080199 -202607655 + MIR SINE MIR 17 241 -21 199 427 0 19 chr2 48082242 48082345 -202605509 - L3 LINE CR1 -417 1160 1060 392 228 158 8 chr2 48082721 48082848 -202605006 + MIR3 SINE MIR 39 184 -24 388 248 26 20 chr2 48082877 48082903 -202604951 - L1MA10 LINE L1 -1 6333 6308 1169 184 85 7 chr2 48082903 48083174 -202604680 - L1ME2 LINE L1 -19 6145 5854 344 221 0 62 chr2 48083176 48083289 -202604565 - L1MC5 LINE L1 -28 7933 7828 526 231 0 9 chr2 48083308 48083416 -202604438 + L2 LINE L2 3207 3313 0 305 311 47 42 chr2 48084346 48084536 -202603318 + MIR SINE MIR 2 192 -70 209 227 280 0 chr2 48084616 48084691 -202603163 - L2 LINE L2 -38 3234 3139 1548 186 79 3 chr2 48085905 48086222 -202601632 + MER58B DNA MER1_type 1 341 0 377 234 198 20 chr2 48087203 48087400 -202600454 + Charlie8 DNA MER1_type 2 233 -2184 1619 177 0 7 chr2 48087520 48087819 -202600035 - AluJo SINE Alu -15 297 1 204 193 35 18 chr2 48087864 48087921 -202599933 + CT-rich Low_complexity Low_complexity 3 60 0 858 263 27 0 chr2 48088272 48088496 -202599358 - MIR SINE MIR -26 236 7 363 292 190 15 chr2 48088775 48088912 -202598942 - MER5B DNA MER1_type -17 161 1 388 254 82 8 chr2 48089054 48089188 -202598666 + MER5B DNA MER1_type 33 176 -2 233 374 120 18 chr2 48089188 48089489 -202598365 + L3 LINE CR1 62 395 -1182 604 277 24 33 chr2 48089535 48089748 -202598106 + L3 LINE CR1 541 751 -826 227 304 9 71 chr2 48089752 48089864 -202597990 - MIR SINE MIR -56 206 102 306 319 68 85 chr2 48089867 48089962 -202597892 + L3 LINE CR1 748 843 -734 788 171 0 0 chr2 48089962 48090079 -202597775 + FLAM_C SINE Alu 1 117 -16 306 319 68 85 chr2 48090079 48090139 -202597715 + L3 LINE CR1 843 902 -675 1836 186 74 25 chr2 48090139 48090584 -202597270 - MLT1C LTR MaLR 0 467 1 306 319 68 85 chr2 48090584 48090781 -202597073 + L3 LINE CR1 902 1095 -482 2201 99 0 0 chr2 48090806 48091098 -202596756 + AluSp SINE Alu 1 292 -21 541 355 58 23 chr2 48092794 48093141 -202594713 - L2 LINE L2 0 3272 2914 377 355 75 5 chr2 48093496 48093696 -202594158 - MIR SINE MIR -6 256 43 284 128 0 0 chr2 48095214 48095261 -202592593 - L3b LINE CR1 -250 1333 1287 446 255 124 7 chr2 48095775 48095920 -202591934 + MIR SINE MIR 46 207 -55 449 234 63 0 chr2 48096015 48096126 -202591728 + MER103 DNA DNA 1 118 -48 222 272 49 74 chr2 48096893 48096974 -202590880 - L2 LINE L2 -44 3228 3150 315 49 0 0 chr2 48097250 48097291 -202590563 + (CA)n Simple_repeat Simple_repeat 1 41 0 2214 87 7 0 chr2 48101568 48101867 -202585987 + AluSp SINE Alu 1 301 -12 1117 153 66 8 chr2 48102176 48102412 -202585442 + L1MA9 LINE L1 5931 6168 -144 1644 148 3 62 chr2 48102417 48102721 -202585133 + AluJb SINE Alu 1 286 -26 262 61 0 61 chr2 48102770 48102819 -202585035 - MADE1 DNA Mariner 0 80 35 530 58 0 0 chr2 48102823 48102892 -202584962 + L1PA10 LINE L1 6095 6163 -5 268 98 24 0 chr2 48102919 48102960 -202584894 - MADE1 DNA Mariner -37 43 2 617 113 61 0 chr2 48102960 48103075 -202584779 + L1MA9 LINE L1 6190 6311 -1 526 282 110 0 chr2 48104044 48104253 -202583601 + L1ME3A LINE L1 5395 5626 -538 1461 226 70 15 chr2 48104256 48104655 -202583199 + L1ME3A LINE L1 5743 6163 -7 2278 20 0 0 chr2 48104661 48104948 -202582906 + L1PA3 LINE L1 5898 6184 0 2135 99 14 0 chr2 48104957 48105251 -202582603 + AluSc SINE Alu 1 298 -11 1499 177 56 0 chr2 48105268 48105556 -202582298 + AluJo SINE Alu 2 305 -7 249 256 67 33 chr2 48105961 48106051 -202581803 + MIR SINE MIR 88 180 -82 474 289 14 7 chr2 48107046 48107188 -202580666 - MIR SINE MIR -29 233 91 201 286 209 9 chr2 48107193 48107298 -202580556 - MIR SINE MIR -87 175 50 330 281 88 58 chr2 48107373 48107544 -202580310 - L2 LINE L2 0 3313 3138 1582 243 196 25 chr2 48107571 48108131 -202579723 - MER115 DNA AcHobo -37 656 1 285 255 27 101 chr2 48109615 48109764 -202578090 - MIR SINE MIR -117 145 8 278 312 43 35 chr2 48110771 48110912 -202576942 + MIR3 SINE MIR 35 176 -32 222 272 96 88 chr2 48111034 48111170 -202576684 + MIR SINE MIR 9 145 -117 336 204 0 0 chr2 48111718 48111772 -202576082 + Charlie1 DNA MER1_type 2 55 -2706 971 231 127 48 chr2 48111776 48112232 -202575622 - MLT1E LTR MaLR 0 593 1 929 176 18 0 chr2 48112244 48112409 -202575445 + Charlie1 DNA MER1_type 2343 2510 -251 471 165 18 101 chr2 48112409 48112485 -202575369 + Charlie1 DNA MER1_type 2660 2726 -35 2048 101 10 3 chr2 48112485 48112783 -202575071 + AluSx SINE Alu 1 300 -12 471 165 18 101 chr2 48112783 48112815 -202575039 + Charlie1 DNA MER1_type 2726 2759 -2 224 306 87 41 chr2 48113906 48114102 -202573752 + L2 LINE L2 2871 3075 -197 197 267 50 17 chr2 48114824 48114884 -202572970 + MER5A DNA MER1_type 60 121 -68 253 229 83 52 chr2 48114909 48115005 -202572849 + L2 LINE L2 3172 3270 -2 1458 311 102 35 chr2 48115823 48116405 -202571449 + L2 LINE L2 559 1213 -2101 2120 115 3 0 chr2 48116405 48116709 -202571145 - AluSg SINE Alu -5 305 1 1458 311 102 35 chr2 48116709 48116947 -202570907 + L2 LINE L2 1213 1434 -1880 457 284 49 39 chr2 48116948 48117223 -202570631 - L1 LINE L1 -1986 4160 3886 533 322 84 4 chr2 48117343 48117570 -202570284 - L1 LINE L1 -2527 3619 3375 794 272 75 63 chr2 48118601 48119190 -202568664 + L1M4 LINE L1 3950 4545 -1601 309 181 9 86 chr2 48119193 48119309 -202568545 - HAL1b LINE L1 -911 437 331 920 154 143 6 chr2 48119311 48119486 -202568368 + MSTA LTR MaLR 1 199 -229 1221 14 0 0 chr2 48119487 48119631 -202568223 + AluYb8 SINE Alu 175 318 0 1033 172 110 35 chr2 48119633 48119860 -202567994 + MSTA LTR MaLR 185 428 0 342 260 75 107 chr2 48119885 48120466 -202567388 - L1M2 LINE L1 -1140 1367 904 7415 202 22 5 chr2 48120988 48121965 -202565889 - L1PA16 LINE L1 -9 6157 5198 229 25 0 50 chr2 48121965 48122005 -202565849 + (TTTTG)n Simple_repeat Simple_repeat 4 41 0 7415 202 22 5 chr2 48122005 48123423 -202564431 - L1PA16 LINE L1 -968 5198 3744 343 277 117 73 chr2 48123456 48123611 -202564243 + HAL1 LINE L1 894 1062 -1445 180 0 0 0 chr2 48123611 48123631 -202564223 + (CAA)n Simple_repeat Simple_repeat 2 21 0 343 277 117 73 chr2 48123631 48123681 -202564173 + HAL1 LINE L1 1062 1108 -1399 392 228 17 70 chr2 48123683 48123866 -202563988 - L1MEd LINE L1 -4919 1286 1152 2180 103 3 22 chr2 48123866 48124185 -202563669 - AluSp SINE Alu 0 313 1 392 228 17 70 chr2 48124185 48124251 -202563603 - L1MEd LINE L1 -5053 1152 1084 827 145 0 14 chr2 48124642 48124787 -202563067 - AluSg/x SINE Alu -5 305 163 14171 159 27 12 chr2 48124788 48127637 -202560217 - L1M1 LINE L1 -1327 6238 3302 423 0 0 0 chr2 48127637 48127684 -202560170 + (TG)n Simple_repeat Simple_repeat 2 48 0 14171 159 27 12 chr2 48127684 48129671 -202558183 - L1M1 LINE L1 -4263 3302 1346 574 252 241 38 chr2 48129706 48129996 -202557858 + MER115 DNA AcHobo 117 465 -228 469 256 50 10 chr2 48130162 48130326 -202557528 + MIR SINE MIR 31 204 -4 1140 195 46 14 chr2 48130439 48130721 -202557133 + L1MB3 LINE L1 5893 6183 0 2601 193 51 18 chr2 48131089 48131637 -202556217 - MLT1F1 LTR MaLR 0 567 2 5466 187 35 16 chr2 48131848 48132891 -202554963 - L1M1 LINE L1 -6481 1084 22 362 305 61 86 chr2 48132917 48133196 -202554658 - L1MEd LINE L1 -5237 968 697 808 246 57 0 chr2 48133222 48133397 -202554457 + MER58A DNA MER1_type 40 224 0 2018 130 7 0 chr2 48133535 48133843 -202554011 + AluSx SINE Alu 1 310 -2 433 386 34 16 chr2 48134042 48134363 -202553491 - L1MEd LINE L1 -5948 448 122 2387 57 0 0 chr2 48134363 48134664 -202553190 + L1P LINE L1 2006 2306 -3840 1595 77 10 0 chr2 48135181 48135390 -202552464 + L1PA11 LINE L1 5942 6152 -22 1872 146 7 0 chr2 48135500 48135795 -202552059 - AluSx SINE Alu -15 297 1 222 37 0 0 chr2 48137037 48137064 -202550790 + (T)n Simple_repeat Simple_repeat 1 27 0 195 204 32 129 chr2 48138043 48138136 -202549718 - L2 LINE L2 -2115 1199 1116 459 203 73 28 chr2 48138380 48138645 -202549209 - LTR16A LTR ERVL 0 450 141 2231 97 17 0 chr2 48138768 48139068 -202548786 + AluSq SINE Alu 1 305 -8 826 142 0 8 chr2 48139100 48139227 -202548627 - FAM SINE Alu -27 158 33 335 147 21 21 chr2 48139494 48139589 -202548265 + GA-rich Low_complexity Low_complexity 3 97 0 2254 97 3 0 chr2 48140481 48140789 -202547065 - AluSc SINE Alu 0 309 1 1594 188 7 7 chr2 48141571 48141869 -202545985 + AluJo SINE Alu 1 298 -14 862 182 40 29 chr2 48143456 48143719 -202544135 + MLT1A2 LTR MaLR 1 374 0 31 26 0 0 chr2 48144703 48144741 -202543113 + AT_rich Low_complexity Low_complexity 1 38 0 611 283 66 52 chr2 48145273 48145559 -202542295 - L2 LINE L2 0 3313 3024 22948 52 3 5 chr2 48146048 48149247 -202538607 + L1P2 LINE L1 2492 5682 -472 453 187 130 41 chr2 48149248 48149371 -202538483 - MER44D DNA MER2_type -205 404 1 1300 137 9 0 chr2 48149375 48149587 -202538267 + L1MD1 LINE L1 6028 6241 -1 523 281 15 37 chr2 48149715 48149850 -202538004 + L2 LINE L2 3136 3267 -5 3851 34 21 4 chr2 48149875 48150343 -202537511 + L1PA5 LINE L1 5677 6152 -2 369 0 0 0 chr2 48150456 48150497 -202537357 + (TG)n Simple_repeat Simple_repeat 2 42 0 487 278 0 0 chr2 48150541 48150692 -202537162 + HAL1 LINE L1 1102 1252 -1255 2186 220 46 16 chr2 48150694 48151198 -202536656 - MLT1F LTR MaLR 0 542 24 3104 231 84 76 chr2 48151200 48151410 -202536444 + HAL1 LINE L1 1275 1482 -1025 667 217 8 0 chr2 48151410 48151539 -202536315 + FLAM_A SINE Alu 4 133 0 3104 231 84 76 chr2 48151539 48152550 -202535304 + HAL1 LINE L1 1482 2506 -1 342 300 50 0 chr2 48152582 48152702 -202535152 - L2 LINE L2 -1318 1996 1871 699 273 76 27 chr2 48152760 48153090 -202534764 + L1MC/D LINE L1 5315 5660 -2148 398 270 57 29 chr2 48153750 48153929 -202533925 + MIR SINE MIR 30 206 -56 419 322 133 42 chr2 48154040 48154304 -202533550 - L2 LINE L2 -4 3268 2981 1554 171 32 0 chr2 48154599 48154880 -202532974 - AluJb SINE Alu -22 290 1 257 347 0 0 chr2 48155343 48155438 -202532416 + CT-rich Low_complexity Low_complexity 2 96 0 1419 294 57 30 chr2 48156144 48156650 -202531204 + MER115 DNA AcHobo 174 693 0 417 267 49 135 chr2 48157601 48157696 -202530158 + L2 LINE L2 3030 3132 -140 1878 158 0 3 chr2 48157696 48158007 -202529847 - AluSx SINE Alu -2 310 1 417 267 49 135 chr2 48158007 48158177 -202529677 + L2 LINE L2 3132 3272 0 202 205 0 0 chr2 48158883 48158922 -202528932 + (TG)n Simple_repeat Simple_repeat 2 40 0 2027 92 0 18 chr2 48159058 48159339 -202528515 - AluSg SINE Alu -11 299 24 1781 153 24 3 chr2 48159346 48159641 -202528213 - AluJb SINE Alu -11 301 1 324 213 189 30 chr2 48159668 48159837 -202528017 - L1ME2 LINE L1 -4 6160 5965 303 71 0 0 chr2 48159838 48159880 -202527974 + (TA)n Simple_repeat Simple_repeat 1 42 0 270 283 125 13 chr2 48160097 48160249 -202527605 + MIR SINE MIR 20 188 -74 470 319 133 13 chr2 48160320 48160546 -202527308 - MIR SINE MIR -3 259 7 1749 157 3 17 chr2 48160591 48160891 -202526963 + AluJo SINE Alu 1 296 -16 246 280 40 0 chr2 48162255 48162330 -202525524 + MIR SINE MIR 67 144 -118 336 48 0 0 chr2 48162588 48162630 -202525224 + (TG)n Simple_repeat Simple_repeat 2 43 0 371 244 98 0 chr2 48162683 48162762 -202525092 - L2 LINE L2 -4 3268 3182 354 274 126 0 chr2 48162762 48162857 -202524997 - MER91A DNA MER1_type 0 196 90 * 498 320 34 39 chr2 48162853 48163031 -202524823 - MER91A DNA MER1_type -17 179 3 495 219 16 110 chr2 48163881 48164065 -202523789 - MIR SINE MIR -62 146 24 1618 142 86 44 chr2 48164214 48164574 -202523280 + THE1C LTR MaLR 1 375 0 374 186 12 0 chr2 48164657 48164743 -202523111 + (ATG)n Simple_repeat Simple_repeat 3 89 0 2030 116 0 3 chr2 48165799 48166083 -202521771 - AluSx SINE Alu -29 283 1 416 306 35 114 chr2 48166625 48166880 -202520974 - L2 LINE L2 -87 3185 2951 535 120 0 0 chr2 48167529 48167604 -202520250 - AluSg/x SINE Alu -17 292 218 233 266 198 13 chr2 48168454 48168655 -202519199 + MIR SINE MIR 15 260 -2 531 241 44 84 chr2 48169959 48170072 -202517782 + MIR SINE MIR 21 124 -138 2375 65 0 7 chr2 48170072 48170379 -202517475 + AluY SINE Alu 1 305 -6 531 241 44 84 chr2 48170379 48170468 -202517386 + MIR SINE MIR 124 215 -47 220 282 218 0 chr2 48171348 48171426 -202516428 - MIR SINE MIR -95 113 19 337 251 137 14 chr2 48171444 48171655 -202516199 + L2 LINE L2 2658 2894 -420 560 260 39 33 chr2 48171704 48171885 -202515969 + L2 LINE L2 3132 3313 0 210 265 0 0 chr2 48172388 48172437 -202515417 - MIR3 SINE MIR -6 202 154 874 280 101 15 chr2 48172477 48172934 -202514920 - L1MEc LINE L1 -4184 2212 1717 243 0 0 0 chr2 48173222 48173249 -202514605 + (ATG)n Simple_repeat Simple_repeat 2 28 0 440 267 58 8 chr2 48174035 48174155 -202513699 + MIR SINE MIR 15 140 -122 1357 203 52 0 chr2 48174269 48174559 -202513295 + AluJo SINE Alu 1 305 -7 1109 272 84 29 chr2 48174578 48175159 -202512695 + L1ME4a LINE L1 5314 5926 -195 249 244 111 115 chr2 48175332 48175551 -202512303 + L1ME4a LINE L1 5611 5829 -292 6132 23 0 0 chr2 48175551 48176247 -202511607 + L1PA3 LINE L1 5457 6152 -3 249 244 111 115 chr2 48176247 48176540 -202511314 + L1ME4a LINE L1 5829 6121 0 291 271 153 8 chr2 48176569 48176687 -202511167 + MIR SINE MIR 122 256 -6 220 284 60 75 chr2 48177344 48177536 -202510318 - L2 LINE L2 -2 3311 3085 624 212 27 0 chr2 48177857 48178003 -202509851 - L1MA10 LINE L1 -10 6324 6175 2041 92 26 62 chr2 48178239 48178543 -202509311 - AluSg SINE Alu -17 293 1 3151 216 23 23 chr2 48179210 48179820 -202508034 - L1ME1 LINE L1 -142 6024 5412 2270 105 0 13 chr2 48179820 48180124 -202507730 + AluSx SINE Alu 5 304 -8 3151 216 23 23 chr2 48180124 48180241 -202507613 - L1ME1 LINE L1 -753 5413 5297 608 215 76 7 chr2 48180289 48180433 -202507421 - L1MA10 LINE L1 -1 6333 6180 1805 192 35 105 chr2 48180480 48180643 -202507211 - L1ME1 LINE L1 -836 5310 5137 1844 158 0 10 chr2 48180643 48180941 -202506913 - AluSq SINE Alu -18 295 1 1805 192 35 105 chr2 48180941 48181396 -202506458 - L1ME1 LINE L1 -1009 5137 4735 878 233 42 14 chr2 48181413 48181628 -202506226 - L1MB7 LINE L1 -21 6163 5943 5784 148 37 26 chr2 48181732 48182174 -202505680 - L1PA15 LINE L1 0 6165 5729 5109 44 7 2 chr2 48182174 48182762 -202505092 - LTR10C LTR ERV1 0 591 1 5784 148 37 26 chr2 48182762 48184161 -202503693 - L1PA15 LINE L1 -436 5729 4289 1278 272 84 38 chr2 48184181 48184967 -202502887 - L1ME3A LINE L1 -223 5947 5098 2470 49 0 0 chr2 48184967 48185275 -202502579 - AluY SINE Alu 0 308 1 1278 272 84 38 chr2 48185275 48185503 -202502351 - L1ME3A LINE L1 -1072 5098 4882 541 117 13 0 chr2 48185568 48185686 -202502168 - AluSg/x SINE Alu 0 322 204 658 263 107 56 chr2 48185686 48186097 -202501757 - L1ME3A LINE L1 -1320 4826 4395 1290 90 0 12 chr2 48186097 48186264 -202501590 - AluY SINE Alu -146 165 1 436 297 129 68 chr2 48186306 48186749 -202501105 - L1MEd LINE L1 -1052 1735 1012 613 220 110 103 chr2 48186934 48187096 -202500758 - ORSL DNA AcHobo 0 275 109 2060 121 7 10 chr2 48187096 48187401 -202500453 - AluSx SINE Alu -8 304 1 613 220 110 103 chr2 48187401 48187511 -202500343 - ORSL DNA AcHobo -166 109 1 196 242 0 0 chr2 48188794 48188827 -202499027 + L2 LINE L2 3201 3233 -39 379 242 21 11 chr2 48188893 48188988 -202498866 - MIR SINE MIR -147 115 20 294 227 206 21 chr2 48190160 48190313 -202497541 + MIR SINE MIR 21 147 -61 1884 239 103 89 chr2 48190653 48190803 -202497051 + L2 LINE L2 1685 1831 -1483 2601 42 7 10 chr2 48190803 48191113 -202496741 - AluY SINE Alu -2 309 1 1884 239 103 89 chr2 48191113 48191441 -202496413 + L2 LINE L2 1831 2153 -1161 306 0 0 0 chr2 48191441 48191475 -202496379 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1884 239 103 89 chr2 48191475 48191996 -202495858 + L2 LINE L2 2153 2699 -615 1119 186 46 13 chr2 48192009 48192249 -202495605 + L1MC2 LINE L1 6075 6321 -23 686 227 44 78 chr2 48192266 48192701 -202495153 + L2 LINE L2 2709 3147 -166 284 227 0 40 chr2 48193176 48193251 -202494603 + L2 LINE L2 3162 3233 -80 319 78 0 7 chr2 48193252 48193308 -202494546 - MSTB LTR MaLR -310 122 69 227 250 158 0 chr2 48193894 48193970 -202493884 - L1ME LINE L1 -381 5740 5653 2026 184 39 5 chr2 48194162 48194543 -202493311 - Tigger2a DNA MER2_type -40 394 1 416 290 35 21 chr2 48194598 48194743 -202493111 + MER5B DNA MER1_type 7 153 -25 2652 117 82 0 chr2 48194745 48195137 -202492717 + MSTB LTR MaLR 3 426 0 1147 260 111 9 chr2 48195757 48196180 -202491674 - L1ME4a LINE L1 -5 6116 5651 1108 149 77 41 chr2 48196252 48196473 -202491381 - L1MB5 LINE L1 0 6174 5946 304 315 11 4 chr2 48196493 48196601 -202491253 + MIR SINE MIR 40 145 -63 357 192 39 77 chr2 48196675 48196779 -202491075 - MIR3 SINE MIR -14 194 95 2104 262 61 15 chr2 48197146 48197756 -202490098 + L1MC4 LINE L1 7268 7919 -123 411 21 0 0 chr2 48197756 48197804 -202490050 + (TG)n Simple_repeat Simple_repeat 2 49 0 2104 262 61 15 chr2 48197804 48197930 -202489924 + L1MC4 LINE L1 7919 8038 -4 309 319 84 6 chr2 48197961 48198127 -202489727 + Charlie8 DNA MER1_type 44 222 -2195 301 68 14 54 chr2 48199157 48199231 -202488623 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 1312 186 171 0 chr2 48199986 48200082 -202487772 + AluJo SINE Alu 1 79 -223 225 0 0 0 chr2 48200082 48200107 -202487747 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1312 186 171 0 chr2 48200107 48200268 -202487586 + AluJo SINE Alu 79 302 0 223 273 41 83 chr2 48200370 48200491 -202487363 - L2 LINE L2 -40 3273 3158 207 0 0 0 chr2 48200658 48200681 -202487173 + (TG)n Simple_repeat Simple_repeat 2 24 0 245 213 0 0 chr2 48200997 48201044 -202486810 - L2 LINE L2 -6 3266 3220 5456 205 94 121 chr2 48201126 48202097 -202485757 + L1MC4 LINE L1 5561 6556 -1486 2199 150 66 10 chr2 48202097 48202504 -202485350 - L1MB4 LINE L1 -7 6173 5744 5456 205 94 121 chr2 48202504 48202718 -202485136 + L1MC4 LINE L1 6556 6774 -1268 659 144 0 10 chr2 48202718 48202815 -202485039 + AluJb SINE Alu 187 282 -30 5456 205 94 121 chr2 48202815 48203937 -202483917 + L1MC4 LINE L1 6774 8039 -3 306 221 21 62 chr2 48203976 48204121 -202483733 + Charlie7 DNA MER1_type 2473 2611 -1 1147 176 40 20 chr2 48204148 48204398 -202483456 + L1MB3 LINE L1 5927 6181 -2 566 279 43 14 chr2 48204890 48205191 -202482663 - MLT1I LTR MaLR -15 394 57 251 291 60 75 chr2 48206224 48206358 -202481496 - L2 LINE L2 0 3272 3141 187 236 18 0 chr2 48206415 48206470 -202481384 - MIR SINE MIR -72 136 81 1780 177 3 7 chr2 48207446 48207751 -202480103 - AluJo SINE Alu -3 309 6 181 304 112 32 chr2 48208219 48208344 -202479510 + MIR SINE MIR 19 153 -109 231 88 0 0 chr2 48208716 48208750 -202479104 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 841 149 40 20 chr2 48208750 48208898 -202478956 - L1PA16 LINE L1 -12 6154 6004 1513 188 5 117 chr2 48209528 48209937 -202477917 - MLT1A1 LTR MaLR 0 365 3 272 216 22 104 chr2 48210139 48210273 -202477581 - MLT1J LTR MaLR -233 278 156 516 167 40 40 chr2 48210903 48211053 -202476801 + L1PA2 LINE L1 6006 6155 0 536 235 90 56 chr2 48211082 48211350 -202476504 + MER66A LTR ERV1 192 468 -10 2460 282 45 23 chr2 48211364 48212010 -202475844 - LTR23-int LTR ERV1 -3241 950 283 2188 116 0 17 chr2 48212010 48212312 -202475542 + AluSx SINE Alu 1 297 -15 2460 282 45 23 chr2 48212312 48212448 -202475406 - LTR23-int LTR ERV1 -3908 283 151 407 308 48 38 chr2 48212448 48212608 -202475246 - MIR SINE MIR -67 141 3 228 180 40 0 chr2 48212847 48212897 -202474957 - MER34C LTR ERV1 -373 212 161 411 248 67 40 chr2 48212899 48212955 -202474899 - LTR23-int LTR ERV1 -4130 993 940 2798 123 57 0 chr2 48212955 48213360 -202474494 + MSTA LTR MaLR 1 428 0 411 248 67 40 chr2 48213360 48213452 -202474402 - LTR23-int LTR ERV1 -4183 940 841 1438 161 7 69 chr2 48213521 48213826 -202474028 - LTR23-int LTR ERV1 -6711 826 541 2451 194 43 6 chr2 48213864 48214380 -202473474 - LTR23-int LTR ERV1 -6998 539 5 4887 163 19 12 chr2 48214485 48215348 -202472506 + LTR37A-int LTR ERV1 6279 7147 -390 808 157 79 22 chr2 48215348 48215526 -202472328 + LTR54B LTR ERV1 3 190 -308 469 192 96 17 chr2 48215531 48215708 -202472146 + LTR37A-int LTR ERV1 7342 7532 -5 229 279 163 29 chr2 48217323 48217563 -202470291 - L1ME LINE L1 -305 5816 5545 23 33 0 0 chr2 48218999 48219029 -202468825 + AT_rich Low_complexity Low_complexity 1 30 0 277 313 103 41 chr2 48219925 48220120 -202467734 - L2 LINE L2 -224 3048 2842 2378 148 50 2 chr2 48220224 48220623 -202467231 + MSTA LTR MaLR 1 418 -10 367 320 86 47 chr2 48220968 48221317 -202466537 - L2 LINE L2 -1143 2171 1804 1856 172 35 27 chr2 48221317 48221689 -202466165 + THE1C LTR MaLR 1 375 0 367 320 86 47 chr2 48221689 48221723 -202466131 - L2 LINE L2 -1510 1804 1773 346 282 58 6 chr2 48222006 48222162 -202465692 + LTR37A LTR ERV1 139 302 -124 3221 184 51 34 chr2 48222265 48222992 -202464862 + L1MB7 LINE L1 5445 6183 -1 1182 260 58 33 chr2 48222990 48223471 -202464383 + L1M4 LINE L1 2593 3085 -3061 * 1890 120 27 13 chr2 48224161 48224461 -202463393 + AluSx SINE Alu 4 307 -5 500 237 194 11 chr2 48225631 48225817 -202462037 - MIR SINE MIR -9 253 34 2290 160 15 53 chr2 48225992 48226151 -202461703 + L1MC3 LINE L1 7317 7481 -304 1815 177 3 7 chr2 48226151 48226439 -202461415 + AluJb SINE Alu 2 288 -24 2290 160 15 53 chr2 48226439 48226507 -202461347 + L1MC3 LINE L1 7481 7550 -235 1717 74 9 0 chr2 48226507 48226723 -202461131 - AluY SINE Alu -12 299 82 2290 160 15 53 chr2 48226723 48226964 -202460890 + L1MC3 LINE L1 7550 7768 -17 904 268 68 58 chr2 48227072 48227194 -202460660 + L1M4 LINE L1 1891 2010 -4205 2214 110 3 3 chr2 48227194 48227502 -202460352 + AluSc SINE Alu 1 308 -1 904 268 68 58 chr2 48227502 48227766 -202460088 + L1M4 LINE L1 2010 2270 -3945 1870 155 14 0 chr2 48227766 48228056 -202459798 + AluJb SINE Alu 1 294 -18 904 268 68 58 chr2 48228056 48228489 -202459365 + L1M4 LINE L1 2270 2657 -3558 674 239 54 48 chr2 48228501 48229008 -202458846 + L1M4 LINE L1 5254 5749 -494 378 0 0 0 chr2 48231808 48231850 -202456004 + (CA)n Simple_repeat Simple_repeat 2 43 0 560 324 175 9 chr2 48232985 48233426 -202454428 - L2 LINE L2 -1958 1356 843 1642 231 101 20 chr2 48233434 48233931 -202453923 + L1ME1 LINE L1 5612 6148 -18 360 287 161 15 chr2 48234105 48234440 -202453414 - L2 LINE L2 -2798 516 133 212 143 0 0 chr2 48235348 48235383 -202452471 + (G)n Simple_repeat Simple_repeat 1 35 0 332 250 19 28 chr2 48235675 48235783 -202452071 - MIR SINE MIR -67 195 89 615 353 97 6 chr2 48235867 48236227 -202451627 + L3 LINE CR1 974 1366 -211 1090 269 114 39 chr2 48237001 48237484 -202450370 + Zaphod DNA AcHobo 1371 1889 -2142 1403 123 5 0 chr2 48237518 48237721 -202450133 + AluSq SINE Alu 105 308 -5 4825 209 84 45 chr2 48237722 48238614 -202449240 + Zaphod DNA AcHobo 1924 2780 -1251 2159 130 3 0 chr2 48238614 48238922 -202448932 + AluSq SINE Alu 1 309 -4 4825 209 84 45 chr2 48238922 48239936 -202447918 + Zaphod DNA AcHobo 2780 3962 -69 253 61 98 0 chr2 48239936 48240018 -202447836 + (TA)n Simple_repeat Simple_repeat 1 90 0 59 63 0 0 chr2 48240217 48240296 -202447558 + AT_rich Low_complexity Low_complexity 1 79 0 676 64 68 8 chr2 48240296 48240547 -202447307 + (TA)n Simple_repeat Simple_repeat 1 266 0 2323 64 3 30 chr2 48240547 48240842 -202447012 - AluY SINE Alu -24 287 1 232 250 48 24 chr2 48240845 48240929 -202446925 + MER115 DNA AcHobo 607 692 -1 879 232 40 104 chr2 48240935 48241543 -202446311 + L1M4 LINE L1 3176 3744 -2402 222 263 18 18 chr2 48241730 48241787 -202446067 - MER5B DNA MER1_type -85 93 37 4297 194 137 68 chr2 48241787 48242627 -202445227 - MER109 Unknown Unknown -2 2430 1649 2221 75 10 36 chr2 48242627 48242935 -202444919 + AluSg SINE Alu 1 300 -10 4297 194 137 68 chr2 48242935 48243653 -202444201 - MER109 Unknown Unknown -783 1649 107 348 266 91 7 chr2 48244310 48244453 -202443401 - L2 LINE L2 -535 2779 2625 352 276 121 30 chr2 48245159 48245386 -202442468 + L1ME LINE L1 5563 5811 -306 788 193 182 21 chr2 48245386 48245573 -202442281 + MER20 DNA MER1_type 2 218 -1 322 277 85 28 chr2 48246016 48246157 -202441697 - MLT1K LTR MaLR -4 584 436 501 158 12 0 chr2 48246286 48246368 -202441486 - HAL1 LINE L1 -787 1720 1638 318 119 0 0 chr2 48246372 48246414 -202441440 - Alu SINE Alu -253 50 9 490 278 80 0 chr2 48246985 48247161 -202440693 + MLT1I LTR MaLR 186 375 -34 262 320 0 19 chr2 48247204 48247307 -202440547 + GA-rich Low_complexity Low_complexity 3 103 0 314 359 33 41 chr2 48249871 48250116 -202437738 - MIR SINE MIR 0 262 20 288 306 194 6 chr2 48250170 48250350 -202437504 + L3 LINE CR1 1326 1539 -38 225 350 44 6 chr2 48250691 48250851 -202437003 - L2 LINE L2 -462 2852 2687 2059 213 30 0 chr2 48250851 48251284 -202436570 + L1M4 LINE L1 3732 4177 -1969 324 281 92 28 chr2 48251507 48251704 -202436150 + MIR SINE MIR 4 206 -56 637 317 103 22 chr2 48253002 48253460 -202434394 + L3 LINE CR1 1083 1577 0 699 158 14 0 chr2 48254240 48254379 -202433475 + L1MA7 LINE L1 6141 6281 -10 1863 159 3 7 chr2 48254401 48254691 -202433163 + AluJo SINE Alu 1 289 -23 1522 184 48 11 chr2 48257394 48257666 -202430188 + AluJo SINE Alu 11 292 -20 2449 238 117 23 chr2 48257671 48259050 -202428804 - L1MEc LINE L1 -2695 3520 2043 279 234 9 122 chr2 48259060 48259167 -202428687 + MER21B LTR ERV1 12 106 -757 * 2769 205 89 36 chr2 48259165 48259862 -202427992 + MER21B LTR ERV1 19 752 -111 5215 258 78 29 chr2 48259996 48260771 -202427083 - L1MEc LINE L1 -4373 2023 1287 1824 171 17 3 chr2 48260771 48261070 -202426784 - 7SLRNA srpRNA srpRNA 0 320 18 5215 258 78 29 chr2 48261070 48262190 -202425664 - L1MEc LINE L1 -5109 1287 36 370 217 11 22 chr2 48264627 48264719 -202423135 + MER5A DNA MER1_type 9 99 -90 310 344 89 0 chr2 48266024 48266181 -202421673 + MIR SINE MIR 18 188 -74 233 202 5 38 chr2 48267375 48267435 -202420419 + MIR SINE MIR 106 165 -43 1946 193 40 3 chr2 48267570 48267922 -202419932 - MLT1A1 LTR MaLR 0 365 1 1765 158 27 0 chr2 48268628 48268920 -202418934 - AluJo SINE Alu -12 300 1 1023 252 76 18 chr2 48269051 48269380 -202418474 - MARNA DNA Mariner -150 436 89 378 164 15 0 chr2 48269629 48269696 -202418158 + MER5A DNA MER1_type 120 187 -2 800 191 86 0 chr2 48269939 48270101 -202417753 + MER5B DNA MER1_type 3 178 0 416 243 54 0 chr2 48271398 48271509 -202416345 + MIR SINE MIR 91 207 -55 402 263 18 9 chr2 48271715 48271829 -202416025 + MIR SINE MIR 50 164 -98 406 283 44 6 chr2 48271940 48272099 -202415755 + MIR SINE MIR 76 240 -22 545 185 131 39 chr2 48273031 48273161 -202414693 - FLAM_A SINE Alu 0 142 1 422 280 85 19 chr2 48273337 48273480 -202414374 + MIR SINE MIR 1 164 -98 180 0 0 0 chr2 48273480 48273500 -202414354 + (TAA)n Simple_repeat Simple_repeat 3 22 0 422 280 85 19 chr2 48273500 48273567 -202414287 + MIR SINE MIR 164 225 -37 616 292 60 30 chr2 48273741 48273974 -202413880 - MIR SINE MIR 0 262 23 288 325 34 8 chr2 48275412 48275529 -202412325 + MIR SINE MIR 95 214 -48 1329 146 77 5 chr2 48276573 48276793 -202411061 - MER46A DNA MER2_type 0 236 1 323 322 70 9 chr2 48276841 48276956 -202410898 - MIR SINE MIR -60 148 27 446 335 60 9 chr2 48277735 48277968 -202409886 + MIR SINE MIR 5 249 -13 25 65 0 0 chr2 48277978 48278024 -202409830 + AT_rich Low_complexity Low_complexity 1 46 0 220 290 62 108 chr2 48280108 48280284 -202407570 + L2 LINE L2 3076 3243 -29 427 226 142 0 chr2 48281158 48281264 -202406590 + MER5A DNA MER1_type 4 124 -65 360 253 0 0 chr2 48281267 48281346 -202406508 + MER45 DNA AcHobo 1 79 -99 367 155 0 0 chr2 48281346 48281404 -202406450 + MER45 DNA AcHobo 1516 1573 -8 270 271 14 0 chr2 48281410 48281480 -202406374 + MER5A DNA MER1_type 119 189 0 1633 147 11 4 chr2 48281717 48281989 -202405865 + Tigger1 DNA MER2_type 1909 2182 -236 433 286 149 0 chr2 48283443 48283611 -202404243 - MIR SINE MIR -45 217 25 519 272 198 0 chr2 48283611 48283813 -202404041 + MIR SINE MIR 13 254 -8 805 211 154 123 chr2 48285385 48285906 -202401948 - MLT1H1 LTR MaLR -5 548 1 388 243 96 52 chr2 48286064 48286200 -202401654 + L3 LINE CR1 1427 1568 -9 340 278 19 86 chr2 48286715 48286877 -202400977 + MIR3 SINE MIR 50 200 -8 256 331 6 64 chr2 48287032 48287189 -202400665 - L2 LINE L2 -473 2841 2694 2453 73 7 3 chr2 48287195 48287497 -202400357 + AluSc SINE Alu 1 303 -6 200 289 26 53 chr2 48288558 48288634 -202399220 - L2 LINE L2 -66 3206 3133 240 292 0 0 chr2 48289839 48289887 -202397967 + MIR SINE MIR 12 59 -203 294 280 65 28 chr2 48290426 48290533 -202397321 + MIR SINE MIR 119 229 -33 615 62 0 0 chr2 48291138 48291218 -202396636 + (TGG)n Simple_repeat Simple_repeat 3 82 0 180 316 21 84 chr2 48291324 48291419 -202396435 + L2 LINE L2 375 463 -2851 186 133 0 0 chr2 48296079 48296109 -202391745 + (TG)n Simple_repeat Simple_repeat 1 30 0 217 400 0 10 chr2 48297579 48297679 -202390175 + MIR SINE MIR 43 141 -67 606 310 35 0 chr2 48298274 48298448 -202389406 - MER91A DNA MER1_type 0 196 17 559 159 19 0 chr2 48298828 48298935 -202388919 + MER3 DNA MER1_type 96 204 -5 240 250 15 0 chr2 48298887 48298955 -202388899 - MER3 DNA MER1_type -108 101 33 * 266 329 153 0 chr2 48299139 48299224 -202388630 + L2 LINE L2 3152 3249 -23 225 108 0 0 chr2 48299648 48299685 -202388169 + (CA)n Simple_repeat Simple_repeat 2 38 0 298 232 71 39 chr2 48301207 48301378 -202386476 + MIR SINE MIR 16 188 -67 2255 194 77 34 chr2 48301379 48301967 -202385887 + L1ME1 LINE L1 5548 6160 -6 317 317 43 20 chr2 48301992 48302153 -202385701 + MIR SINE MIR 16 180 -63 317 253 25 13 chr2 48302162 48302241 -202385613 - MIR SINE MIR -1 261 182 270 233 47 58 chr2 48302717 48302803 -202385051 - MIR SINE MIR -105 157 73 204 67 0 0 chr2 48303364 48303394 -202384460 + (A)n Simple_repeat Simple_repeat 1 30 0 194 42 0 0 chr2 48303639 48303663 -202384191 + MIR SINE MIR 90 113 -95 201 269 19 0 chr2 48303780 48303832 -202384022 + MIR3 SINE MIR 132 184 -24 300 260 94 39 chr2 48306678 48306805 -202381049 - MIR SINE MIR -62 200 67 200 213 43 0 chr2 48311156 48311203 -202376651 + L2 LINE L2 3197 3245 -27 215 304 0 43 chr2 48312003 48312072 -202375782 + MIR SINE MIR 5 70 -192 244 226 208 9 chr2 48315972 48316078 -202371776 - MIR SINE MIR -63 145 19 621 211 0 0 chr2 48317361 48317470 -202370384 - MIR3 SINE MIR -54 154 46 599 259 18 18 chr2 48318356 48318522 -202369332 + MIR SINE MIR 8 173 -89 * 1044 292 113 28 chr2 48318518 48319022 -202368832 - L2 LINE L2 -1055 2259 1713 312 102 0 0 chr2 48319022 48319071 -202368783 + (TG)n Simple_repeat Simple_repeat 1 49 0 368 193 108 0 chr2 48319089 48319172 -202368682 - L1MC3 LINE L1 -16 7769 7678 925 118 0 15 chr2 48319172 48319307 -202368547 - AluJb SINE Alu -179 133 1 2046 160 111 18 chr2 48319307 48319756 -202368098 - L1MC3 LINE L1 -96 7689 7199 1407 266 61 26 chr2 48319898 48320541 -202367313 + L1ME3A LINE L1 3455 4119 -2027 4081 174 74 14 chr2 48320549 48321363 -202366491 - MER21B LTR ERV1 0 863 1 2392 243 111 74 chr2 48321363 48321983 -202365871 + L1ME3A LINE L1 4114 4710 -1460 920 172 19 6 chr2 48321983 48322140 -202365714 + FAM SINE Alu 1 159 -16 2392 243 111 74 chr2 48322140 48323478 -202364376 + L1ME3A LINE L1 4710 6161 -9 365 329 69 19 chr2 48323490 48323706 -202364148 + L1ME LINE L1 5476 5702 -468 218 279 51 25 chr2 48324066 48324145 -202363709 - MIR3 SINE MIR -13 195 115 207 200 0 0 chr2 48324482 48324522 -202363332 + (TTCA)n Simple_repeat Simple_repeat 3 42 0 738 268 5 0 chr2 48324788 48324982 -202362872 - L1ME1 LINE L1 -5 6161 5967 498 274 48 9 chr2 48325159 48325322 -202362532 - MIR SINE MIR -53 155 19 1632 108 0 5 chr2 48326726 48326938 -202360916 + AluSq SINE Alu 71 281 -32 363 244 81 0 chr2 48327163 48327249 -202360605 - L2 LINE L2 -12 3301 3209 872 212 103 10 chr2 48327397 48327600 -202360254 + MIR SINE MIR 6 227 -35 23 0 0 0 chr2 48327688 48327711 -202360143 + AT_rich Low_complexity Low_complexity 1 23 0 399 290 33 49 chr2 48328258 48328441 -202359413 - MIR SINE MIR -27 235 56 396 0 0 0 chr2 48329142 48329186 -202358668 + (CA)n Simple_repeat Simple_repeat 2 45 0 270 311 174 19 chr2 48329550 48329711 -202358143 - MIR3 SINE MIR 0 208 23 302 319 26 9 chr2 48330417 48330533 -202357321 - L2 LINE L2 -3 3269 3152 446 248 124 24 chr2 48330722 48330932 -202356922 - MIR SINE MIR -10 252 22 45 62 0 0 chr2 48332613 48332693 -202355161 + AT_rich Low_complexity Low_complexity 1 80 0 1812 166 6 28 chr2 48333291 48333610 -202354244 + AluJo SINE Alu 1 312 0 479 250 109 13 chr2 48333882 48334038 -202353816 + MIR SINE MIR 3 173 -89 4285 249 102 40 chr2 48334048 48334485 -202353369 + L1MEc LINE L1 377 786 -5429 1237 210 39 32 chr2 48334485 48334794 -202353060 + AluJo SINE Alu 1 311 -1 4285 249 102 40 chr2 48334794 48334985 -202352869 + L1MEc LINE L1 786 964 -5251 956 51 0 0 chr2 48334985 48335102 -202352752 + L1PA4 LINE L1 6036 6152 -3 4285 249 102 40 chr2 48335102 48336537 -202351317 + L1MEc LINE L1 964 2530 -3685 326 203 0 63 chr2 48336537 48336616 -202351238 + MER21A LTR ERV1 1 74 -857 3147 205 71 49 chr2 48336631 48337368 -202350486 + MER21A LTR ERV1 175 927 -4 502 227 99 61 chr2 48337371 48337665 -202350189 + L1MEc LINE L1 2527 3159 -3056 3366 147 20 20 chr2 48337666 48338270 -202349584 + L1MEc LINE L1 3780 4383 -1832 3805 70 0 0 chr2 48338291 48338774 -202349080 + L1P LINE L1 3 485 -5661 504 182 0 0 chr2 48338775 48338863 -202348991 + AluSg/x SINE Alu 213 300 -10 5385 193 60 46 chr2 48338863 48340162 -202347692 + L1MA7 LINE L1 3003 4281 -2010 1858 185 3 0 chr2 48340162 48340465 -202347389 + AluJo SINE Alu 6 309 -3 5385 193 60 46 chr2 48340465 48340939 -202346915 + L1MA7 LINE L1 4281 4746 -1545 396 0 0 0 chr2 48340939 48340983 -202346871 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 5385 193 60 46 chr2 48340983 48341668 -202346186 + L1MA7 LINE L1 4746 5419 -872 1654 196 4 0 chr2 48341668 48341948 -202345906 + AluJb SINE Alu 1 281 -31 5385 193 60 46 chr2 48341948 48342579 -202345275 + L1MA7 LINE L1 5419 6285 -6 2053 230 28 13 chr2 48342579 48343146 -202344708 + Zaphod DNA AcHobo 77 693 -3338 572 153 122 0 chr2 48343153 48343251 -202344603 - AluJb SINE Alu -201 111 2 502 242 44 69 chr2 48343254 48343365 -202344489 + Zaphod DNA AcHobo 763 875 -3156 2356 59 0 7 chr2 48343365 48343716 -202344138 + AluY SINE Alu 2 311 0 502 242 44 69 chr2 48343716 48343964 -202343890 + Zaphod DNA AcHobo 875 1113 -2918 302 233 0 0 chr2 48344065 48344125 -202343729 + AluJ/monomer SINE Alu 241 300 -2 237 152 0 0 chr2 48344150 48344196 -202343658 - LTR66 LTR ERVL -171 439 394 231 188 0 0 chr2 48344198 48344246 -202343608 + (CATATA)n Simple_repeat Simple_repeat 6 53 0 662 139 0 117 chr2 48344451 48344588 -202343266 + FLAM_A SINE Alu 1 121 -12 25 0 0 0 chr2 48344588 48344613 -202343241 + AT_rich Low_complexity Low_complexity 1 25 0 249 282 82 9 chr2 48344834 48344944 -202342910 - MIR SINE MIR -28 234 117 317 338 59 38 chr2 48346929 48347373 -202340481 + L2 LINE L2 554 1006 -2308 1979 154 0 10 chr2 48347985 48348290 -202339564 + AluJb SINE Alu 1 302 -10 1648 247 95 77 chr2 48348460 48349435 -202338419 + L2 LINE L2 2289 3281 -32 248 144 19 48 chr2 48349435 48349539 -202338315 + (TA)n Simple_repeat Simple_repeat 2 102 0 315 0 0 0 chr2 48349579 48349614 -202338240 + (TC)n Simple_repeat Simple_repeat 2 36 0 243 0 0 0 chr2 48349613 48349640 -202338214 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 241 308 247 40 chr2 48349655 48350237 -202337617 + L2 LINE L2 1885 2587 -727 299 320 141 16 chr2 48352108 48352236 -202335618 - MIR3 SINE MIR -4 204 61 183 276 23 35 chr2 48353669 48353756 -202334098 - MIR SINE MIR -108 154 69 306 309 66 22 chr2 48355250 48355386 -202332468 - L2 LINE L2 -6 3266 3125 382 292 15 31 chr2 48355763 48355893 -202331961 + MIR SINE MIR 26 153 -109 324 195 158 0 chr2 48356113 48356195 -202331659 - MER53 DNA DNA -94 95 1 347 327 12 19 chr2 48356448 48356610 -202331244 + MER103 DNA DNA 4 164 -2 307 251 36 35 chr2 48358501 48358649 -202329205 - MIR SINE MIR -61 147 35 986 96 0 0 chr2 48359217 48359342 -202328512 + AluSg SINE Alu 1 125 -185 925 138 101 0 chr2 48359605 48359743 -202328111 + AluSg SINE Alu 131 282 -30 200 318 31 31 chr2 48360136 48360265 -202327589 + L2 LINE L2 3180 3308 -5 803 200 27 22 chr2 48360343 48360528 -202327326 + LTR41 LTR ERVL 1 186 -587 475 148 0 82 chr2 48360843 48360965 -202326889 + LTR41 LTR ERVL 656 767 -6 435 177 0 13 chr2 48361089 48361168 -202326686 - LTR33A LTR ERVL 0 523 446 667 273 45 5 chr2 48361177 48361375 -202326479 + MIR SINE MIR 57 262 0 1724 158 7 37 chr2 48361683 48361981 -202325873 + AluJb SINE Alu 1 289 -23 210 138 52 0 chr2 48361982 48362040 -202325814 + (TA)n Simple_repeat Simple_repeat 2 62 0 887 203 0 6 chr2 48362255 48362418 -202325436 + AluJb SINE Alu 137 298 -14 443 250 83 7 chr2 48362477 48362621 -202325233 - L1MC/D LINE L1 -1984 5824 5670 191 167 21 42 chr2 48362842 48362890 -202324964 + MIR SINE MIR 162 208 -54 1434 199 47 4 chr2 48364345 48364622 -202323232 - AluJo SINE Alu -19 293 5 417 291 110 6 chr2 48364637 48364819 -202323035 + MLT1H LTR MaLR 1 201 -348 305 234 21 32 chr2 48364923 48365017 -202322837 + MLT1H LTR MaLR 431 523 -26 738 133 158 18 chr2 48365135 48365300 -202322554 + MER53 DNA DNA 2 189 0 40602 67 18 3 chr2 48365548 48371603 -202316251 - L1PA5 LINE L1 -7 6147 1 183 273 0 36 chr2 48371679 48371734 -202316120 - MIR SINE MIR -162 100 48 852 189 6 12 chr2 48371868 48372032 -202315822 - MLT1C LTR MaLR 0 467 305 1729 220 98 13 chr2 48372034 48372485 -202315369 + MLT2B1 LTR ERVL 4 414 0 1224 106 136 68 chr2 48372492 48372727 -202315127 - MLT1B LTR MaLR -139 251 1 267 196 235 20 chr2 48374825 48374927 -202312927 + MIR SINE MIR 123 246 -16 627 254 108 24 chr2 48374960 48375173 -202312681 + MIR SINE MIR 30 260 -2 687 325 118 10 chr2 48375182 48375725 -202312129 - L3 LINE CR1 -713 864 208 1718 179 7 19 chr2 48377272 48377580 -202310274 - AluJo SINE Alu -8 304 1 181 151 110 68 chr2 48377618 48377691 -202310163 - MIR SINE MIR -97 111 36 1406 193 119 3 chr2 48378352 48378663 -202309191 + MLT1D LTR MaLR 26 372 -133 189 0 0 0 chr2 48379906 48379927 -202307927 + (CA)n Simple_repeat Simple_repeat 2 22 0 619 269 113 44 chr2 48381017 48381381 -202306473 - MLT1J LTR MaLR -10 501 113 374 227 31 72 chr2 48382287 48382384 -202305470 - MER5B DNA MER1_type -78 100 8 411 257 216 0 chr2 48382396 48382544 -202305310 + MER5A DNA MER1_type 4 183 -6 1437 171 57 0 chr2 48382598 48382879 -202304975 + AluJb SINE Alu 7 303 -9 548 194 104 8 chr2 48383810 48383944 -202303910 - MER45A DNA AcHobo -1 177 31 1904 158 52 49 chr2 48384927 48385217 -202302637 - MLT1B LTR MaLR -3 387 94 1041 46 8 0 chr2 48385217 48385347 -202302507 - L1PB2 LINE L1 0 6151 6021 1904 158 52 49 chr2 48385347 48385441 -202302413 - MLT1B LTR MaLR -296 94 2 280 247 39 0 chr2 48385442 48385519 -202302335 - MIR SINE MIR -118 144 65 192 242 45 61 chr2 48385535 48385601 -202302253 + L2 LINE L2 1166 1230 -2084 605 153 0 0 chr2 48385765 48385876 -202301978 - AluJb SINE Alu 0 312 202 2226 112 0 0 chr2 48386473 48386778 -202301076 + AluSx SINE Alu 3 307 -5 562 265 155 31 chr2 48386795 48387086 -202300768 - MER102a DNA MER1_type -3 327 1 1665 237 78 60 chr2 48388234 48388737 -202299117 + MLT1K LTR MaLR 69 580 -8 1996 168 55 23 chr2 48389132 48389566 -202298288 + L1MB8 LINE L1 5731 6178 0 951 260 21 29 chr2 48389677 48389919 -202297935 + MER115 DNA AcHobo 1 240 -453 1809 110 89 0 chr2 48389921 48390202 -202297652 + AluSq SINE Alu 1 306 -7 715 245 76 30 chr2 48390353 48390590 -202297264 + MER115 DNA AcHobo 446 693 0 638 274 26 0 chr2 48391047 48391200 -202296654 + MER91A DNA MER1_type 18 174 -22 253 230 140 30 chr2 48391195 48391295 -202296559 + MER91A DNA MER1_type 86 196 0 * 252 219 67 67 chr2 48391684 48391789 -202296065 + MER4E LTR ERV1 260 364 -402 * 628 290 80 40 chr2 48391745 48392045 -202295809 + Charlie2 DNA MER1_type 11 322 -2460 * 3161 196 100 23 chr2 48392039 48392985 -202294869 + Charlie2 DNA MER1_type 1838 2856 -6 442 234 16 23 chr2 48394032 48394160 -202293694 + L1ME4a LINE L1 5560 5686 -435 239 295 141 45 chr2 48394307 48394394 -202293460 - MIR SINE MIR -21 241 164 1701 186 7 0 chr2 48394394 48394701 -202293153 - AluJb SINE Alu -2 310 2 239 295 141 45 chr2 48394701 48394769 -202293085 - MIR SINE MIR -98 164 71 247 268 132 70 chr2 48394887 48395115 -202292739 + L1ME4a LINE L1 5878 6119 -2 338 300 0 113 chr2 48395147 48395307 -202292547 + L1ME4a LINE L1 5693 5834 -287 24 32 0 0 chr2 48395424 48395455 -202292399 + AT_rich Low_complexity Low_complexity 1 31 0 201 374 17 17 chr2 48395629 48395744 -202292110 - MIR SINE MIR -59 149 35 319 345 150 10 chr2 48397272 48397472 -202290382 + L2 LINE L2 2709 2936 -378 812 172 0 14 chr2 48397488 48397633 -202290221 + MLT1A1 LTR MaLR 1 143 -222 765 124 9 0 chr2 48397622 48397735 -202290119 + MLT1A1 LTR MaLR 252 365 0 * 489 246 30 30 chr2 48398016 48398150 -202289704 + L2 LINE L2 3180 3313 0 197 211 19 0 chr2 48398287 48398339 -202289515 + CT-rich Low_complexity Low_complexity 1 53 0 2942 108 18 2 chr2 48398938 48399372 -202288482 + LTR56 LTR ERV1 4 444 -1 198 309 52 52 chr2 48400824 48400921 -202286933 - L2 LINE L2 -16 3256 3160 205 322 40 52 chr2 48401678 48401852 -202286002 + L2 LINE L2 2595 2766 -548 1055 168 6 6 chr2 48401883 48402062 -202285792 + AluJo SINE Alu 1 179 -133 820 159 0 0 chr2 48402126 48402258 -202285596 + FRAM SINE Alu 1 40 0 370 328 158 28 chr2 48402327 48402714 -202285140 + L2 LINE L2 2826 3262 -10 2173 85 0 0 chr2 48402714 48403038 -202284816 + AluSg SINE Alu 1 324 0 311 226 0 0 chr2 48403625 48403678 -202284176 - MER45B DNA AcHobo 0 1040 988 2376 83 3 0 chr2 48403679 48403991 -202283863 + AluSq SINE Alu 1 313 0 1075 134 145 94 chr2 48404008 48404284 -202283570 - MER45B DNA AcHobo -36 1004 715 2501 268 89 17 chr2 48404366 48405086 -202282768 - MER45C DNA AcHobo -181 772 1 442 275 81 25 chr2 48406329 48406489 -202281365 - MIR3 SINE MIR -15 193 25 927 214 0 10 chr2 48406803 48406995 -202280859 - L1M4 LINE L1 -3394 2752 2563 2115 113 0 3 chr2 48407033 48407335 -202280519 + AluSc SINE Alu 1 301 -8 313 249 17 156 chr2 48407429 48407493 -202280361 - MER5A DNA MER1_type -1 188 117 2027 135 3 0 chr2 48407493 48407797 -202280057 + AluSq SINE Alu 7 311 -2 313 249 17 156 chr2 48407797 48407905 -202279949 - MER5A DNA MER1_type -72 117 40 3305 242 52 16 chr2 48407914 48409938 -202277916 + L1MB1 LINE L1 976 3144 -3238 770 199 17 50 chr2 48409939 48410120 -202277734 + FRAM SINE Alu 1 175 -1 671 195 50 6 chr2 48410121 48410280 -202277574 + L1MB1 LINE L1 3155 3320 -3062 * 4836 168 20 29 chr2 48410254 48411965 -202275889 + L1MB1 LINE L1 4657 6361 -43 410 0 20 0 chr2 48411965 48412015 -202275839 + (CA)n Simple_repeat Simple_repeat 2 52 0 477 0 0 0 chr2 48412248 48412301 -202275553 + (TG)n Simple_repeat Simple_repeat 2 54 0 787 288 58 0 chr2 48413026 48413252 -202274602 + MIR SINE MIR 24 262 0 444 239 58 45 chr2 48414355 48414510 -202273344 - L1ME3A LINE L1 0 6170 6014 702 220 8 0 chr2 48414569 48414701 -202273153 - FLAM_C SINE Alu 0 133 1 2310 94 0 0 chr2 48415170 48415479 -202272375 - AluY SINE Alu -2 309 1 1343 154 77 39 chr2 48415502 48415787 -202272067 + AluJo SINE Alu 1 296 -16 8165 96 14 1 chr2 48415787 48417708 -202270146 - L1PA8A LINE L1 -29 6102 4162 2416 30 40 0 chr2 48418682 48418979 -202268875 + AluY SINE Alu 1 309 -2 268 267 121 9 chr2 48419418 48419534 -202268320 - Charlie8 DNA MER1_type -2184 233 105 4528 152 23 80 chr2 48419536 48419618 -202268236 - L1MB3 LINE L1 0 6183 6098 1939 125 3 3 chr2 48419618 48419905 -202267949 - AluSq SINE Alu -26 287 1 4528 152 23 80 chr2 48419905 48420539 -202267315 - L1MB3 LINE L1 -85 6098 5534 1685 141 26 35 chr2 48420539 48420706 -202267148 - AluJo SINE Alu -2 310 146 2392 72 0 0 chr2 48420706 48421010 -202266844 - AluY SINE Alu -7 304 1 1685 141 26 35 chr2 48421010 48421155 -202266699 - AluJo SINE Alu -166 146 1 4528 152 23 80 chr2 48421155 48421406 -202266448 - L1MB3 LINE L1 -649 5534 5270 384 238 35 133 chr2 48421495 48421751 -202266103 - MER112 DNA MER1_type -29 231 1 215 295 54 36 chr2 48422864 48422962 -202264892 + L2 LINE L2 3157 3259 -13 1747 157 4 4 chr2 48422962 48423243 -202264611 + AluJo SINE Alu 1 281 -31 215 295 54 36 chr2 48423243 48423256 -202264598 + L2 LINE L2 3259 3270 -2 334 209 19 9 chr2 48424014 48424119 -202263735 - L1MEc LINE L1 -4132 2264 2159 2622 110 3 6 chr2 48424121 48424486 -202263368 - THE1B LTR MaLR 0 364 1 4660 179 49 27 chr2 48424519 48425797 -202262057 - L1MB5 LINE L1 0 6174 4865 789 275 35 28 chr2 48425822 48425879 -202261975 - L1MEc LINE L1 -4258 2138 2083 234 81 0 0 chr2 48425879 48425916 -202261938 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 789 275 35 28 chr2 48425916 48425970 -202261884 - L1MEc LINE L1 -4313 2083 2031 1558 180 17 118 chr2 48425970 48426376 -202261478 + MLT1A1 LTR MaLR 1 365 0 789 275 35 28 chr2 48426376 48426550 -202261304 - L1MEc LINE L1 -4365 2031 1850 327 172 66 16 chr2 48426551 48426673 -202261181 + (TTATA)n Simple_repeat Simple_repeat 5 132 0 468 0 0 0 chr2 48426693 48426745 -202261109 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1813 166 3 3 chr2 48426756 48427063 -202260791 - AluJo SINE Alu -5 307 1 3375 286 82 20 chr2 48427066 48428764 -202259090 - L1MEc LINE L1 -4533 1863 60 393 288 100 12 chr2 48428843 48429013 -202258841 - LTR67 LTR ERVL -8 549 365 2094 107 3 0 chr2 48430274 48430572 -202257282 - AluSx SINE Alu -13 299 1 230 189 19 38 chr2 48430767 48430820 -202257034 + MLT1L LTR MaLR 155 206 -409 * 723 293 90 42 chr2 48430802 48431226 -202256628 + MLT1K LTR MaLR 135 578 -10 353 370 121 7 chr2 48431517 48431796 -202256058 + L2 LINE L2 2445 2755 -559 398 262 68 0 chr2 48431796 48431899 -202255955 + MIR SINE MIR 2 111 -151 222 37 0 0 chr2 48432116 48432143 -202255711 + (TGG)n Simple_repeat Simple_repeat 3 29 0 952 184 0 0 chr2 48432317 48432480 -202255374 + AluJb SINE Alu 141 303 -9 294 311 72 42 chr2 48432909 48433076 -202254778 - MER91A DNA MER1_type -24 172 1 314 319 47 86 chr2 48433213 48433551 -202254303 + L2 LINE L2 2943 3267 -5 1672 124 7 59 chr2 48433650 48433957 -202253897 + AluSx SINE Alu 22 312 0 243 0 0 0 chr2 48434104 48434131 -202253723 + (T)n Simple_repeat Simple_repeat 1 27 0 546 202 19 9 chr2 48434430 48434557 -202253297 - MIR SINE MIR -63 145 21 308 352 8 8 chr2 48435019 48435147 -202252707 + MIR3 SINE MIR 81 208 0 25 0 0 0 chr2 48435681 48435706 -202252148 + AT_rich Low_complexity Low_complexity 1 25 0 25 114 0 0 chr2 48436030 48436153 -202251701 + GC_rich Low_complexity Low_complexity 1 123 0 300 186 0 62 chr2 48436252 48436349 -202251505 + G-rich Low_complexity Low_complexity 4 94 0 27 62 0 0 chr2 48436399 48436447 -202251407 + GC_rich Low_complexity Low_complexity 1 48 0 186 143 0 0 chr2 48436458 48436493 -202251361 + (CTGGGG)n Simple_repeat Simple_repeat 5 39 0 208 314 26 13 chr2 48436743 48436896 -202250958 + C-rich Low_complexity Low_complexity 2 156 0 241 279 171 27 chr2 48438297 48438408 -202249446 + MIR SINE MIR 122 248 -14 570 224 73 30 chr2 48438995 48439160 -202248694 - MIR SINE MIR -58 204 33 801 95 0 0 chr2 48439900 48440016 -202247838 + (TA)n Simple_repeat Simple_repeat 1 116 0 312 314 120 43 chr2 48440040 48440254 -202247600 + MIR SINE MIR 16 249 -13 186 111 315 0 chr2 48441930 48441984 -202245870 - MIR SINE MIR -78 184 114 221 337 79 0 chr2 48443331 48443420 -202244434 + L2 LINE L2 3173 3268 -4 1334 170 25 79 chr2 48443424 48443741 -202244113 + AluJo SINE Alu 1 300 -12 378 294 83 22 chr2 48444059 48444239 -202243615 + MIR SINE MIR 13 203 -59 419 292 136 0 chr2 48444507 48444661 -202243193 + MIR SINE MIR 2 176 -86 347 273 145 24 chr2 48445383 48445513 -202242341 - MIR SINE MIR -63 145 3 218 237 0 17 chr2 48446179 48446238 -202241616 - L2 LINE L2 0 3272 3215 660 225 118 0 chr2 48446494 48446663 -202241191 + MER5A DNA MER1_type 1 189 0 28 48 0 0 chr2 48446788 48446830 -202241024 + AT_rich Low_complexity Low_complexity 1 42 0 3093 100 15 13 chr2 48446831 48447068 -202240786 - L1MA1 LINE L1 -9 6293 6058 2197 89 7 0 chr2 48447068 48447360 -202240494 - AluSg SINE Alu -16 294 1 3093 100 15 13 chr2 48447360 48447594 -202240260 - L1MA1 LINE L1 -244 6058 5821 30 0 0 0 chr2 48447605 48447635 -202240219 + AT_rich Low_complexity Low_complexity 1 30 0 216 97 0 0 chr2 48448257 48448288 -202239566 + (T)n Simple_repeat Simple_repeat 1 31 0 1547 123 8 16 chr2 48449489 48449741 -202238113 - L1MB7 LINE L1 -126 6058 5809 30 0 0 0 chr2 48449954 48449984 -202237870 + AT_rich Low_complexity Low_complexity 1 30 0 799 259 100 30 chr2 48450691 48451132 -202236722 + L1ME4a LINE L1 5636 6107 -14 386 217 56 93 chr2 48451122 48451283 -202236571 - HAL1 LINE L1 -2 2505 2351 * 3102 235 135 19 chr2 48451289 48452423 -202235431 - HAL1 LINE L1 -220 2287 1022 967 173 0 6 chr2 48452437 48452610 -202235244 - AluSg/x SINE Alu -12 298 127 757 183 0 0 chr2 48452657 48452777 -202235077 - AluJb SINE Alu -189 123 4 300 283 22 11 chr2 48452783 48452875 -202234979 - HAL1 LINE L1 -1490 1017 925 1293 283 140 42 chr2 48452893 48452988 -202234866 - HAL1 LINE L1 -1659 848 764 1078 135 35 83 chr2 48452988 48453218 -202234636 - MER20 DNA MER1_type 0 219 1 1293 283 140 42 chr2 48453218 48453878 -202233976 - HAL1 LINE L1 -1743 764 19 369 0 0 0 chr2 48454487 48454528 -202233326 + (CA)n Simple_repeat Simple_repeat 2 42 0 319 318 9 0 chr2 48454533 48454640 -202233214 + (TATATG)n Simple_repeat Simple_repeat 3 110 0 239 149 0 0 chr2 48454645 48454692 -202233162 + L1MC4 LINE L1 6657 6703 -1339 384 268 16 113 chr2 48455236 48455430 -202232424 - MIR SINE MIR -66 196 22 451 255 90 21 chr2 48456462 48456607 -202231247 - MIR SINE MIR -35 227 73 219 328 71 32 chr2 48456671 48456850 -202231004 + MIR3 SINE MIR 6 193 -65 872 113 23 23 chr2 48457302 48457435 -202230419 - FLAM_C SINE Alu 0 133 1 734 124 7 83 chr2 48457447 48457508 -202230346 - L1MB5 LINE L1 0 6174 6110 1817 154 3 29 chr2 48457508 48457820 -202230034 + AluJo SINE Alu 1 304 -8 734 124 7 83 chr2 48457820 48457903 -202229951 - L1MB5 LINE L1 -64 6110 6041 210 206 41 0 chr2 48458507 48458580 -202229274 + GA-rich Low_complexity Low_complexity 1 76 0 272 298 26 94 chr2 48458675 48458866 -202228988 - MLT1L LTR MaLR -437 178 1 307 293 21 117 chr2 48459282 48459521 -202228333 - L2 LINE L2 -90 3182 2967 392 310 55 15 chr2 48459593 48459793 -202228061 - L2 LINE L2 -852 2462 2255 183 258 0 79 chr2 48459810 48459899 -202227955 + L2 LINE L2 2326 2407 -907 415 288 146 52 chr2 48459924 48460462 -202227392 + L2 LINE L2 2523 3184 -129 1754 205 36 83 chr2 48460472 48460867 -202226987 - MER20B DNA MER1_type -8 775 363 1846 164 7 0 chr2 48460867 48461177 -202226677 - AluJb SINE Alu 0 312 1 1754 205 36 83 chr2 48461177 48461262 -202226592 - MER20B DNA MER1_type -420 363 324 1569 162 20 56 chr2 48461262 48461565 -202226289 + AluJo SINE Alu 3 294 -8 1754 205 36 83 chr2 48461565 48461656 -202226198 - MER20B DNA MER1_type -459 324 230 1039 146 79 0 chr2 48461656 48461834 -202226020 - LTR47A LTR ERVL 0 452 261 452 313 112 19 chr2 48462041 48462255 -202225599 - MER20B DNA MER1_type -545 238 5 243 214 286 12 chr2 48462288 48462372 -202225482 + L2 LINE L2 3207 3313 0 1981 137 0 3 chr2 48463644 48463950 -202223904 + AluY SINE Alu 1 305 -6 221 333 15 0 chr2 48464487 48464565 -202223289 - MIR SINE MIR -57 151 72 245 290 14 0 chr2 48465007 48465076 -202222778 + L2 LINE L2 3193 3262 -10 195 180 0 60 chr2 48467066 48467116 -202220738 - L2 LINE L2 -6 3307 3261 270 304 62 27 chr2 48467509 48467621 -202220233 + L2 LINE L2 3182 3297 -16 483 307 13 26 chr2 48467622 48467775 -202220079 - MIR3 SINE MIR -1 207 57 575 297 0 0 chr2 48467804 48467952 -202219902 - MIR SINE MIR -96 166 19 197 298 106 39 chr2 48468076 48468180 -202219674 + L2 LINE L2 3185 3295 -18 2200 99 0 3 chr2 48470458 48470761 -202217093 + AluY SINE Alu 1 302 -9 455 216 74 49 chr2 48471890 48472052 -202215802 + MER117 DNA MER1_type 32 197 0 471 277 107 25 chr2 48472054 48472213 -202215641 + MIR SINE MIR 11 182 -80 1055 174 16 21 chr2 48472213 48472403 -202215451 + MER5A DNA MER1_type 1 189 0 245 200 0 0 chr2 48472491 48472536 -202215318 + L2 LINE L2 3209 3253 -19 3944 166 32 36 chr2 48473177 48473961 -202213893 + L1MB4 LINE L1 5400 6180 0 6793 116 133 17 chr2 48476292 48476609 -202211245 + Tigger1 DNA MER2_type 1 280 -2138 261 57 0 0 chr2 48476609 48476644 -202211210 + (TG)n Simple_repeat Simple_repeat 2 36 0 6793 116 133 17 chr2 48476644 48478265 -202209589 + Tigger1 DNA MER2_type 280 2281 -137 1946 143 0 7 chr2 48478265 48478566 -202209288 + AluSx SINE Alu 1 299 -13 6793 116 133 17 chr2 48478566 48478723 -202209131 + Tigger1 DNA MER2_type 2281 2418 0 484 215 129 6 chr2 48478735 48478898 -202208956 + L1ME4a LINE L1 5938 6120 -1 195 171 186 14 chr2 48479735 48479805 -202208049 - MIR3 SINE MIR -25 183 102 215 139 0 0 chr2 48480248 48480284 -202207570 - MIR SINE MIR -65 143 108 217 290 111 86 chr2 48480735 48480897 -202206957 + MIR SINE MIR 63 228 -34 802 268 86 66 chr2 48480909 48481074 -202206780 - L2 LINE L2 -5 3308 3148 1957 110 7 0 chr2 48481074 48481386 -202206468 + AluSx SINE Alu 1 314 0 802 268 86 66 chr2 48481386 48481614 -202206240 - L2 LINE L2 -165 3148 2906 236 296 68 11 chr2 48481571 48481659 -202206195 - MIR SINE MIR -121 141 49 * 238 259 80 62 chr2 48482387 48482499 -202205355 - MIR SINE MIR -67 195 82 2395 62 3 7 chr2 48483649 48483939 -202203915 + AluY SINE Alu 2 290 -21 242 239 0 0 chr2 48485958 48486004 -202201850 - L2 LINE L2 -217 3055 3010 182 327 0 0 chr2 48490347 48490402 -202197452 - MIR SINE MIR -12 250 196 632 277 108 9 chr2 48490420 48490633 -202197221 + MIR SINE MIR 4 237 -25 2304 95 7 3 chr2 48491729 48492033 -202195821 - AluSg SINE Alu -5 305 1 216 0 0 0 chr2 48492066 48492090 -202195764 + (T)n Simple_repeat Simple_repeat 1 24 0 288 0 0 0 chr2 48492674 48492706 -202195148 + (CA)n Simple_repeat Simple_repeat 1 32 0 436 294 27 27 chr2 48493200 48493228 -202194626 + MIR3 SINE MIR 32 59 -149 2340 79 13 7 chr2 48493228 48493531 -202194323 - AluSq SINE Alu -8 305 1 436 294 27 27 chr2 48493531 48493648 -202194206 + MIR3 SINE MIR 58 177 -31 22 35 0 0 chr2 48493831 48493860 -202193994 + AT_rich Low_complexity Low_complexity 1 29 0 27 49 0 0 chr2 48497732 48497773 -202190081 + GC_rich Low_complexity Low_complexity 1 41 0 1960 118 31 3 chr2 48499042 48499331 -202188523 - AluSx SINE Alu -15 297 1 191 154 19 96 chr2 48499448 48499500 -202188354 + L2 LINE L2 3167 3214 -99 1923 149 48 0 chr2 48499899 48500194 -202187660 - AluJb SINE Alu -3 309 1 2119 122 14 0 chr2 48500857 48501151 -202186703 - AluSx SINE Alu -14 298 1 250 280 140 0 chr2 48501885 48501985 -202185869 - MIR SINE MIR -10 252 139 396 0 0 0 chr2 48503191 48503235 -202184619 + (CA)n Simple_repeat Simple_repeat 1 44 0 955 273 24 8 chr2 48503289 48503538 -202184316 + MIR SINE MIR 9 261 -1 793 265 73 8 chr2 48504501 48504746 -202183108 - MIR SINE MIR 0 262 2 2224 91 0 50 chr2 48505188 48505506 -202182348 - AluY SINE Alu -9 302 1 342 274 156 34 chr2 48505800 48506168 -202181686 + L1ME LINE L1 5255 5680 -441 * 905 135 62 141 chr2 48506154 48506242 -202181612 + L1MA7 LINE L1 6009 6102 -189 1900 121 0 77 chr2 48506242 48506555 -202181299 + AluJb SINE Alu 2 290 -22 905 135 62 141 chr2 48506555 48506770 -202181084 + L1MA7 LINE L1 6102 6288 -3 2314 239 195 27 chr2 48506937 48507360 -202180494 + L2 LINE L2 1941 2292 -1022 1994 111 31 3 chr2 48507360 48507649 -202180205 + AluSp SINE Alu 1 297 -16 2314 239 195 27 chr2 48507649 48508111 -202179743 + L2 LINE L2 2292 2975 -339 579 219 224 77 chr2 48508124 48508525 -202179329 + L2 LINE L2 2849 3308 -5 248 239 91 11 chr2 48511086 48511174 -202176680 + MIR3 SINE MIR 114 208 0 199 225 113 14 chr2 48513248 48513319 -202174535 + MIR SINE MIR 85 162 -100 2511 54 0 3 chr2 48513571 48513865 -202173989 - AluY SINE Alu -18 293 1 217 342 68 32 chr2 48515760 48515950 -202171904 + MIR SINE MIR 56 252 -10 183 80 0 0 chr2 48516430 48516455 -202171399 + (TG)n Simple_repeat Simple_repeat 2 26 0 25 31 0 0 chr2 48517080 48517112 -202170742 + AT_rich Low_complexity Low_complexity 1 32 0 318 233 139 47 chr2 48517959 48518217 -202169637 + L1MC4a LINE L1 5617 5898 -223 363 254 50 27 chr2 48518234 48518398 -202169456 + HAL1b LINE L1 1195 6120 -1 344 330 51 10 chr2 48518429 48518626 -202169228 + L1MB7 LINE L1 5612 5816 -305 459 145 24 0 chr2 48518662 48518745 -202169109 + MIR SINE MIR 85 169 -93 705 207 0 22 chr2 48519006 48519141 -202168713 + FLAM_A SINE Alu 1 132 -1 331 159 0 16 chr2 48520003 48520066 -202167788 - L1MC/D LINE L1 -1988 5820 5759 2295 97 7 0 chr2 48520066 48520365 -202167489 - AluSg SINE Alu -9 301 1 2337 91 0 3 chr2 48521471 48521768 -202166086 - AluSg SINE Alu -14 296 1 1437 87 73 23 chr2 48521775 48521994 -202165860 - AluSq SINE Alu -3 310 81 4229 138 35 9 chr2 48522063 48522758 -202165096 - L1MB8 LINE L1 -35 6143 5431 2078 114 3 3 chr2 48522867 48523164 -202164690 + AluSg SINE Alu 1 297 -13 1823 263 137 66 chr2 48523431 48524344 -202163510 - HAL1 LINE L1 0 2507 1434 2304 99 3 0 chr2 48524344 48524646 -202163208 - AluSx SINE Alu -9 303 1 1823 263 137 66 chr2 48524646 48525306 -202162548 - HAL1 LINE L1 -1073 1434 822 1187 170 46 39 chr2 48525311 48525365 -202162489 + L1MB7 LINE L1 5922 5974 -210 1723 102 18 0 chr2 48525365 48525590 -202162264 - MER30 DNA MER1_type -1 229 1 1187 170 46 39 chr2 48525590 48525794 -202162060 + L1MB7 LINE L1 5974 6182 -2 382 283 22 0 chr2 48525927 48526019 -202161835 - HAL1 LINE L1 -1837 670 577 301 291 76 23 chr2 48527252 48527424 -202160430 + L1ME LINE L1 5606 5786 -335 273 241 115 11 chr2 48527629 48527716 -202160138 + MLT1L LTR MaLR 497 592 -23 28 0 0 0 chr2 48527837 48527865 -202159989 + AT_rich Low_complexity Low_complexity 1 28 0 266 200 46 62 chr2 48528323 48528388 -202159466 - L2 LINE L2 -18 3254 3191 7482 122 20 13 chr2 48529784 48531944 -202155910 + L1MA3 LINE L1 4125 6305 0 271 325 128 21 chr2 48532487 48532631 -202155223 - MIR SINE MIR -71 191 32 419 271 62 8 chr2 48532667 48532796 -202155058 + MIR SINE MIR 48 183 -79 743 270 200 47 chr2 48533086 48533620 -202154234 - L1MC4a LINE L1 -1639 6169 5554 2048 136 22 24 chr2 48533650 48534019 -202153835 + L1MB8 LINE L1 5612 5979 -205 387 169 13 0 chr2 48534020 48534097 -202153757 + L1MB8 LINE L1 6101 6178 0 15465 123 39 23 chr2 48534310 48534626 -202153228 - Tigger1 DNA MER2_type 0 2418 2109 2276 108 0 10 chr2 48534626 48534932 -202152922 - AluSx SINE Alu -9 303 1 15465 123 39 23 chr2 48534932 48536995 -202150859 - Tigger1 DNA MER2_type -309 2109 1 2476 82 0 0 chr2 48537461 48537764 -202150090 - AluSx SINE Alu -9 303 1 2293 93 10 0 chr2 48538141 48538432 -202149422 + AluSc SINE Alu 1 294 -15 189 147 0 0 chr2 48538874 48538908 -202148946 + (T)n Simple_repeat Simple_repeat 1 34 0 32 43 0 0 chr2 48539111 48539157 -202148697 + AT_rich Low_complexity Low_complexity 1 46 0 649 199 152 53 chr2 48539674 48539845 -202148009 - MER5A DNA MER1_type -1 188 1 180 77 0 0 chr2 48539969 48539995 -202147859 + (TA)n Simple_repeat Simple_repeat 1 26 0 201 74 0 0 chr2 48540019 48540046 -202147808 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 194 176 137 0 chr2 48543099 48543150 -202144704 - MIR SINE MIR -66 142 85 180 77 0 0 chr2 48544169 48544195 -202143659 + (CTG)n Simple_repeat Simple_repeat 2 27 0 224 310 81 35 chr2 48545357 48545444 -202142410 + L2 LINE L2 3178 3268 -4 301 289 82 29 chr2 48546905 48547019 -202140835 + MIR SINE MIR 17 127 -81 1692 171 7 7 chr2 48547101 48547393 -202140461 + AluJb SINE Alu 1 292 -20 476 299 23 6 chr2 48547402 48547576 -202140278 + L2 LINE L2 1730 1906 -1408 207 43 109 0 chr2 48547614 48547660 -202140194 + (TA)n Simple_repeat Simple_repeat 2 52 0 1268 290 171 29 chr2 48547663 48548643 -202139211 + L2 LINE L2 2209 3313 0 2565 50 0 3 chr2 48549022 48549320 -202138534 + AluY SINE Alu 1 297 -14 2250 106 3 0 chr2 48549466 48549759 -202138095 + AluSx SINE Alu 1 294 -18 31 0 0 0 chr2 48550946 48550977 -202136877 + AT_rich Low_complexity Low_complexity 1 31 0 192 77 0 0 chr2 48550977 48551003 -202136851 + (TTTTC)n Simple_repeat Simple_repeat 5 30 0 1635 186 13 3 chr2 48551998 48552304 -202135550 - AluJo SINE Alu -3 309 1 252 0 0 0 chr2 48552310 48552338 -202135516 + (T)n Simple_repeat Simple_repeat 1 28 0 5452 134 29 59 chr2 48552874 48553762 -202134092 - L1PA16 LINE L1 0 6166 5253 2257 115 0 0 chr2 48553762 48554067 -202133787 - AluSq SINE Alu -8 305 1 5452 134 29 59 chr2 48554067 48554376 -202133478 - L1PA16 LINE L1 -913 5253 4936 2066 135 0 20 chr2 48554376 48554679 -202133175 - AluSx SINE Alu -15 297 1 5452 134 29 59 chr2 48554679 48555040 -202132814 - L1PA16 LINE L1 -1230 4936 4643 2170 112 0 7 chr2 48555040 48555343 -202132511 - AluSg SINE Alu -8 302 2 5452 134 29 59 chr2 48555343 48555525 -202132329 - L1PA16 LINE L1 -1523 4643 4457 2553 246 87 3 chr2 48556204 48556937 -202130917 - L1MC4 LINE L1 -151 7891 7097 3012 209 66 24 chr2 48556960 48557291 -202130563 - L1MC4 LINE L1 -143 7899 7583 1614 69 5 10 chr2 48557291 48557495 -202130359 - L1PA16 LINE L1 0 6166 5964 3012 209 66 24 chr2 48557495 48557924 -202129930 - L1MC4 LINE L1 -459 7583 7107 1216 216 129 4 chr2 48557935 48558213 -202129641 - L1MC4a LINE L1 -1044 6764 6452 27 29 0 0 chr2 48558258 48558292 -202129562 + AT_rich Low_complexity Low_complexity 1 34 0 2263 107 7 0 chr2 48558548 48558847 -202129007 + AluSx SINE Alu 1 301 -11 1765 181 0 16 chr2 48558944 48559247 -202128607 + AluJo SINE Alu 12 309 -3 189 107 0 0 chr2 48559277 48559305 -202128549 + (A)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 48559645 48559667 -202128187 + AT_rich Low_complexity Low_complexity 1 22 0 323 381 82 16 chr2 48559672 48559916 -202127938 + L1MEd LINE L1 106 365 -5754 1763 166 20 20 chr2 48560071 48560366 -202127488 + AluJo SINE Alu 1 295 -17 994 146 0 0 chr2 48560390 48560534 -202127320 + AluJb SINE Alu 145 288 -24 2225 114 3 0 chr2 48560802 48561100 -202126754 + AluSx SINE Alu 1 299 -13 243 263 95 0 chr2 48561119 48561214 -202126640 + L1MEd LINE L1 1040 1143 -4976 2342 94 0 0 chr2 48561246 48561544 -202126310 - AluSg SINE Alu -12 298 1 423 273 227 27 chr2 48561917 48562217 -202125637 - L2 LINE L2 -4 3309 2950 2381 220 116 43 chr2 48562994 48563126 -202124728 - HAL1 LINE L1 -631 1876 1755 1717 139 0 21 chr2 48563126 48563406 -202124448 - AluJo SINE Alu -1 311 38 2381 220 116 43 chr2 48563406 48564127 -202123727 - HAL1 LINE L1 -752 1755 961 2095 228 40 38 chr2 48564139 48564836 -202123018 - L1MEc LINE L1 -3406 2809 2142 2182 105 3 26 chr2 48564836 48565141 -202122713 - AluSg SINE Alu -12 298 1 2095 228 40 38 chr2 48565141 48565162 -202122692 - L1MEc LINE L1 -4073 2142 2123 391 263 90 13 chr2 48565212 48565368 -202122486 - L1MEc LINE L1 -6218 178 11 * 397 225 78 35 chr2 48565342 48565484 -202122370 - HAL1 LINE L1 -1528 1048 901 1916 159 20 0 chr2 48565484 48565785 -202122069 - AluJb SINE Alu -4 308 2 1004 98 10 133 chr2 48565878 48566060 -202121794 - MER20 DNA MER1_type 0 219 63 2330 90 13 0 chr2 48566060 48566361 -202121493 + AluSx SINE Alu 1 305 -7 1004 98 10 133 chr2 48566361 48566381 -202121473 - MER20 DNA MER1_type -156 63 42 1158 296 131 38 chr2 48566404 48567062 -202120792 - HAL1 LINE L1 -1757 750 32 2085 143 3 0 chr2 48567065 48567365 -202120489 + AluSx SINE Alu 1 301 -11 2063 127 7 0 chr2 48567367 48567687 -202120167 + AluSx SINE Alu 1 322 0 2189 102 24 0 chr2 48568182 48568475 -202119379 - AluSc SINE Alu -9 300 1 1848 175 0 0 chr2 48568676 48568979 -202118875 + AluJo SINE Alu 4 306 -6 820 138 0 0 chr2 48568988 48569097 -202118757 + AluJb SINE Alu 1 109 -203 243 0 0 0 chr2 48569102 48569129 -202118725 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6271 135 27 36 chr2 48569495 48570576 -202117278 - MER11C LTR ERVK 0 1071 1 2362 81 0 3 chr2 48571199 48571496 -202116358 + AluY SINE Alu 1 296 -15 885 186 224 0 chr2 48571636 48571819 -202116035 + MER58A DNA MER1_type 1 224 0 202 200 0 0 chr2 48573362 48573397 -202114457 + CT-rich Low_complexity Low_complexity 2 36 0 329 277 131 8 chr2 48575642 48575772 -202112082 - MIR3 SINE MIR -6 202 57 229 187 160 0 chr2 48575837 48575912 -202111942 - L1PA16 LINE L1 -1 6165 6079 481 239 185 0 chr2 48576657 48576787 -202111067 - MER5A DNA MER1_type -27 162 9 410 321 104 10 chr2 48577343 48577536 -202110318 + MIR SINE MIR 20 230 -32 638 266 21 26 chr2 48577728 48577920 -202109934 - L2 LINE L2 0 3313 3123 304 269 131 15 chr2 48578192 48578333 -202109521 - MIR SINE MIR -64 144 1 330 274 12 12 chr2 48578744 48578828 -202109026 + MER81 DNA DNA 28 111 -3 453 290 16 8 chr2 48579089 48579213 -202108641 + MIR SINE MIR 108 232 -30 187 273 117 13 chr2 48579256 48579333 -202108521 + MIR SINE MIR 79 163 -99 228 313 31 0 chr2 48579387 48579451 -202108403 + MIR SINE MIR 11 76 -186 662 233 33 0 chr2 48579714 48579864 -202107990 - MIR SINE MIR -31 231 77 431 306 19 25 chr2 48579869 48580026 -202107828 + MIR SINE MIR 88 243 -19 329 270 190 0 chr2 48582558 48582695 -202105159 - MIR SINE MIR -8 254 92 710 110 0 0 chr2 48582696 48582787 -202105067 + AluJ/FLAM SINE Alu 2 92 -220 365 261 26 9 chr2 48582945 48583060 -202104794 + MIR3 SINE MIR 69 185 -23 24 32 0 0 chr2 48583501 48583532 -202104322 + AT_rich Low_complexity Low_complexity 1 31 0 200 268 0 36 chr2 48583642 48583698 -202104156 + (CATA)n Simple_repeat Simple_repeat 4 57 0 2452 84 0 3 chr2 48584526 48584834 -202103020 - AluSq SINE Alu -6 307 1 189 0 0 0 chr2 48585328 48585349 -202102505 + (A)n Simple_repeat Simple_repeat 1 21 0 25 0 0 0 chr2 48586125 48586150 -202101704 + GC_rich Low_complexity Low_complexity 1 25 0 262 254 0 0 chr2 48586177 48586236 -202101618 + G-rich Low_complexity Low_complexity 2 60 0 212 222 0 86 chr2 48586437 48586554 -202101300 + C-rich Low_complexity Low_complexity 3 109 0 1323 244 83 43 chr2 48587291 48587687 -202100167 + LTR33 LTR ERVL 3 424 -97 628 216 88 57 chr2 48587687 48587914 -202099940 - MER106A DNA MER1_type -1 235 2 1323 244 83 43 chr2 48587914 48588009 -202099845 + LTR33 LTR ERVL 424 514 -7 1430 269 67 57 chr2 48588108 48589155 -202098699 - L1ME3A LINE L1 -219 5951 4915 1099 41 47 12 chr2 48589155 48589326 -202098528 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 1912 128 0 11 chr2 48589332 48589614 -202098240 - AluJb SINE Alu -33 279 1 1430 269 67 57 chr2 48589614 48589733 -202098121 - L1ME3A LINE L1 -1259 4911 4795 2185 123 0 0 chr2 48589733 48590043 -202097811 - AluY SINE Alu -1 310 1 1430 269 67 57 chr2 48590043 48590188 -202097666 - L1ME3A LINE L1 -1375 4795 4616 332 209 0 0 chr2 48590759 48590826 -202097028 - MIR SINE MIR -10 252 186 333 0 0 0 chr2 48591802 48591839 -202096015 + (TG)n Simple_repeat Simple_repeat 1 37 0 825 229 11 21 chr2 48591926 48592114 -202095740 - MER5A DNA MER1_type -3 186 1 450 271 7 77 chr2 48592114 48592269 -202095585 - MIR3 SINE MIR -48 160 17 2390 103 0 0 chr2 48593877 48594187 -202093667 - AluSx SINE Alu -2 310 1 21 0 0 0 chr2 48595246 48595267 -202092587 + AT_rich Low_complexity Low_complexity 1 21 0 351 276 124 28 chr2 48598455 48598600 -202089254 - MIR3 SINE MIR -34 174 16 322 290 92 106 chr2 48598746 48599105 -202088749 + L2 LINE L2 2919 3272 0 196 235 148 49 chr2 48599523 48599604 -202088250 - L2 LINE L2 0 3272 3184 2284 105 0 0 chr2 48601682 48601976 -202085878 + AluSx SINE Alu 1 294 -18 277 114 0 0 chr2 48603609 48603653 -202084201 + L1M4c LINE L1 12 55 -6329 856 143 15 38 chr2 48604312 48604445 -202083409 - FLAM_C SINE Alu -3 130 1 865 325 48 16 chr2 48604864 48605035 -202082819 + HAL1b LINE L1 72 236 -1112 429 20 0 0 chr2 48605035 48605085 -202082769 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 865 325 48 16 chr2 48605085 48605482 -202082372 + HAL1b LINE L1 236 658 -690 842 133 7 22 chr2 48605519 48605654 -202082200 + FLAM_C SINE Alu 1 133 0 35 0 0 0 chr2 48605783 48605818 -202082036 + AT_rich Low_complexity Low_complexity 1 35 0 849 147 0 0 chr2 48605821 48605937 -202081917 - FLAM_C SINE Alu -25 118 3 2328 104 0 3 chr2 48606090 48606397 -202081457 + AluSc SINE Alu 1 306 -3 459 48 0 0 chr2 48606415 48606477 -202081377 + (TA)n Simple_repeat Simple_repeat 2 63 0 2989 210 43 68 chr2 48606493 48607423 -202080431 + L1MC5 LINE L1 6625 7531 -430 1827 116 12 0 chr2 48607627 48607878 -202079976 + AluSq SINE Alu 1 254 -59 2095 124 0 0 chr2 48607880 48608206 -202079648 + AluSx SINE Alu 1 326 0 2137 123 36 3 chr2 48609180 48609482 -202078372 - AluSx SINE Alu 0 312 1 201 206 116 75 chr2 48610601 48610681 -202077173 - MIR SINE MIR -64 144 61 2785 7 0 10 chr2 48611679 48611986 -202075868 - AluYa5 SINE Alu -7 304 1 462 316 10 47 chr2 48613849 48614042 -202073812 + MIR SINE MIR 7 192 -70 779 151 0 58 chr2 48615969 48616136 -202071718 + FLAM_C SINE Alu 1 133 0 471 298 35 25 chr2 48616139 48616337 -202071517 - MLT1K LTR MaLR -60 528 329 2036 137 3 10 chr2 48617017 48617331 -202070523 + AluJb SINE Alu 1 312 0 1717 142 0 4 chr2 48618005 48618259 -202069595 + AluSq SINE Alu 1 253 -60 1791 88 4 0 chr2 48618811 48619037 -202068817 - AluSg SINE Alu -83 227 1 1232 222 113 28 chr2 48619160 48619593 -202068261 + L1MC4a LINE L1 5631 6100 -1708 2337 211 117 43 chr2 48619650 48620324 -202067530 - MER44D DNA MER2_type 0 605 10 24 0 0 0 chr2 48620357 48620381 -202067473 + AT_rich Low_complexity Low_complexity 1 24 0 379 333 18 0 chr2 48620907 48621018 -202066836 + L2 LINE L2 3140 3252 -20 1342 288 120 27 chr2 48621023 48621282 -202066572 + L2 LINE L2 2419 2652 -661 926 224 0 0 chr2 48621282 48621443 -202066411 - FRAM SINE Alu -5 161 1 1342 288 120 27 chr2 48621443 48621984 -202065870 + L2 LINE L2 2652 3312 -1 2063 139 0 3 chr2 48622139 48622441 -202065413 + AluJb SINE Alu 1 301 -11 2308 97 0 10 chr2 48622575 48622885 -202064969 + AluSq SINE Alu 1 307 -6 502 298 24 44 chr2 48623008 48623213 -202064641 - MIR SINE MIR -56 206 6 228 375 48 0 chr2 48623282 48623386 -202064468 - L2 LINE L2 -213 3059 2951 397 321 43 0 chr2 48623872 48624012 -202063842 - L2 LINE L2 -964 2350 2205 566 224 14 14 chr2 48624017 48624160 -202063694 + L1ME2 LINE L1 6002 6144 -20 290 216 128 10 chr2 48624897 48624999 -202062855 + MIR SINE MIR 137 250 -12 307 298 123 18 chr2 48625959 48626073 -202061781 - L2 LINE L2 -4 3268 3143 554 227 129 46 chr2 48626264 48626458 -202061396 + L2 LINE L2 3104 3313 0 236 320 158 57 chr2 48626469 48627166 -202060688 - L2 LINE L2 -735 2579 1813 851 137 0 43 chr2 48627304 48627443 -202060411 + FLAM_C SINE Alu 1 133 0 314 227 212 30 chr2 48628206 48628338 -202059516 - MIR3 SINE MIR -23 185 30 505 257 72 33 chr2 48628832 48628984 -202058870 + MIR SINE MIR 50 207 -55 355 266 50 58 chr2 48631634 48631773 -202056081 + MER21B LTR ERV1 98 235 -628 2116 203 28 65 chr2 48631806 48632344 -202055510 + MER21B LTR ERV1 345 862 -1 216 292 14 14 chr2 48632575 48632647 -202055207 + L3 LINE CR1 633 704 -873 429 289 105 15 chr2 48632948 48633153 -202054701 - MIR SINE MIR -12 250 30 219 201 49 201 chr2 48633667 48633811 -202054043 + MIR SINE MIR 91 212 -50 1986 91 4 4 chr2 48634583 48634847 -202053007 - Tigger5 DNA MER2_type 0 2323 2060 383 295 186 32 chr2 48634937 48635340 -202052514 - L2 LINE L2 -663 2651 2187 2165 95 3 0 chr2 48635701 48635984 -202051870 - AluSc SINE Alu -5 304 21 330 306 0 65 chr2 48636730 48636854 -202051000 - MER5A DNA MER1_type 0 189 74 2126 118 10 7 chr2 48636959 48637265 -202050589 - AluSg SINE Alu -3 307 1 308 103 0 35 chr2 48637274 48637332 -202050522 - L1ME2 LINE L1 0 6164 6109 575 226 0 8 chr2 48637367 48637500 -202050354 + L1M4 LINE L1 3923 4054 -2092 2390 216 128 26 chr2 48637538 48639028 -202048826 - L1ME2 LINE L1 -28 6205 4556 4709 243 94 73 chr2 48639048 48639157 -202048697 - L1ME2 LINE L1 -2098 4117 4012 2533 69 0 0 chr2 48639157 48639462 -202048392 - AluSg SINE Alu -5 305 1 4709 243 94 73 chr2 48639462 48639894 -202047960 - L1ME2 LINE L1 -2203 4012 3591 1850 168 0 0 chr2 48639894 48640185 -202047669 + AluJb SINE Alu 1 291 -21 4709 243 94 73 chr2 48640185 48641434 -202046420 - L1ME2 LINE L1 -2624 3591 2370 604 153 0 0 chr2 48641434 48641519 -202046335 + MER58A DNA MER1_type 4 88 -19 4709 243 94 73 chr2 48641519 48641929 -202045925 - L1ME2 LINE L1 -3845 2370 1970 1666 163 0 17 chr2 48641929 48642224 -202045630 + AluJb SINE Alu 23 312 0 4709 243 94 73 chr2 48642224 48643290 -202044564 - L1ME2 LINE L1 -4245 1970 929 198 71 0 0 chr2 48643290 48643318 -202044536 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 1480 212 11 4 chr2 48643318 48643596 -202044258 - AluJo SINE Alu -32 280 1 4709 243 94 73 chr2 48643596 48644311 -202043543 - L1ME2 LINE L1 -5285 930 19 560 284 4 31 chr2 48644291 48644520 -202043334 - L1MEc LINE L1 -4754 1642 1420 * 683 289 93 66 chr2 48644527 48644916 -202042938 - L1MEc LINE L1 -5758 638 226 207 0 0 0 chr2 48644916 48644939 -202042915 + (TG)n Simple_repeat Simple_repeat 2 24 0 683 289 93 66 chr2 48644939 48645137 -202042717 - L1MEc LINE L1 -6170 226 35 22 0 0 0 chr2 48645377 48645399 -202042455 + AT_rich Low_complexity Low_complexity 1 22 0 351 248 29 29 chr2 48645459 48645596 -202042258 - HAL1b LINE L1 -284 1064 928 692 229 83 5 chr2 48645652 48645857 -202041997 + L1ME LINE L1 5527 5747 -374 22 0 0 0 chr2 48646772 48646794 -202041060 + AT_rich Low_complexity Low_complexity 1 22 0 432 205 90 8 chr2 48646911 48647033 -202040821 + MIR SINE MIR 100 231 -31 201 229 21 0 chr2 48647499 48647547 -202040307 - MIR3 SINE MIR -48 160 112 2573 213 49 18 chr2 48649267 48650189 -202037665 - L1MD2 LINE L1 -471 5888 4941 * 2837 226 64 45 chr2 48650188 48651221 -202036633 - L1M4 LINE L1 -1076 5464 4412 3122 230 117 39 chr2 48651227 48652915 -202034939 - L1MDb LINE L1 -3027 3513 1958 2187 109 0 10 chr2 48652915 48653217 -202034637 - AluSg SINE Alu -11 299 1 3122 230 117 39 chr2 48653217 48653559 -202034295 - L1MDb LINE L1 -4582 1958 1644 2237 92 3 0 chr2 48653559 48653876 -202033978 - AluSp SINE Alu 0 318 1 3122 230 117 39 chr2 48653876 48653961 -202033893 - L1MDb LINE L1 -4896 1644 1223 1186 43 0 0 chr2 48653962 48654101 -202033753 - AluY SINE Alu -5 306 168 968 224 24 72 chr2 48654101 48654436 -202033418 - L1MDb LINE L1 -5316 1227 909 318 300 146 45 chr2 48654481 48654701 -202033153 - L1MDb LINE L1 -5575 955 714 374 363 69 33 chr2 48654917 48655162 -202032692 - L1MDb LINE L1 -6253 287 34 233 204 366 0 chr2 48655236 48655329 -202032525 - MIR SINE MIR -18 244 118 1973 149 3 3 chr2 48655376 48655671 -202032183 - AluSx SINE Alu -11 301 7 946 196 27 5 chr2 48655724 48655908 -202031946 + MER5A DNA MER1_type 1 188 -1 3680 131 105 5 chr2 48656154 48656491 -202031363 - Tigger3(Golem) DNA MER2_type -1 3028 2726 191 88 29 0 chr2 48656491 48656525 -202031329 + (TGAG)n Simple_repeat Simple_repeat 4 38 0 3680 131 105 5 chr2 48656525 48656861 -202030993 - Tigger3(Golem) DNA MER2_type -303 2726 2287 636 183 25 8 chr2 48656849 48656969 -202030885 - Tigger3(Golem) DNA MER2_type -2907 122 1 * 2226 91 3 0 chr2 48657139 48657425 -202030429 + AluSx SINE Alu 1 287 -25 234 342 9 27 chr2 48657885 48657940 -202029914 - L2 LINE L2 -30 3283 3229 1885 164 30 35 chr2 48657940 48658306 -202029548 + MLT1A1 LTR MaLR 1 364 -1 234 342 9 27 chr2 48658306 48658361 -202029493 - L2 LINE L2 -84 3229 3175 377 315 65 53 chr2 48659081 48659518 -202028336 - L2 LINE L2 -177 3095 2652 2118 140 0 0 chr2 48659908 48660215 -202027639 - AluSx SINE Alu -5 307 1 795 178 63 35 chr2 48660243 48660417 -202027437 + AluJb SINE Alu 132 310 -2 266 292 169 8 chr2 48661768 48661898 -202025956 + L2 LINE L2 2909 3059 -213 691 254 127 45 chr2 48661899 48662311 -202025543 - MLT1J LTR MaLR 0 511 1 326 332 144 32 chr2 48662323 48662510 -202025344 + L2 LINE L2 3065 3272 0 323 75 0 0 chr2 48662754 48662807 -202025047 - L1MB4 LINE L1 0 6180 6128 199 200 14 29 chr2 48662807 48662877 -202024977 + CT-rich Low_complexity Low_complexity 5 73 0 1650 182 7 7 chr2 48662877 48663163 -202024691 - AluJo SINE Alu -26 286 1 2628 113 20 0 chr2 48663163 48663563 -202024291 - L1MB3 LINE L1 -41 6142 5735 1378 128 49 4 chr2 48663607 48663833 -202024021 - MER46A DNA MER2_type 0 236 1 191 343 96 15 chr2 48665067 48665265 -202022589 - L2 LINE L2 -655 2659 2446 323 266 78 112 chr2 48666294 48666715 -202021139 - L1ME3A LINE L1 -7 6163 5757 1238 139 6 0 chr2 48668060 48668240 -202019614 - AluSg/x SINE Alu -12 300 120 347 91 0 0 chr2 48668244 48668288 -202019566 - Alu SINE Alu -258 44 1 771 311 65 15 chr2 48668458 48668857 -202018997 - L1ME4a LINE L1 -200 5921 5503 419 237 30 30 chr2 48669070 48669158 -202018696 - FLAM_A SINE Alu -171 131 41 189 0 0 0 chr2 48669158 48669179 -202018675 + (CCCCCA)n Simple_repeat Simple_repeat 5 25 0 419 237 30 30 chr2 48669179 48669221 -202018633 - FLAM_A SINE Alu -260 42 1 24 0 0 0 chr2 48669232 48669256 -202018598 + AT_rich Low_complexity Low_complexity 1 24 0 2161 120 0 0 chr2 48669492 48669784 -202018070 - AluSg SINE Alu -18 292 1 3879 87 30 2 chr2 48669990 48670529 -202017325 - MER41A LTR ERV1 0 554 1 2168 126 0 0 chr2 48670808 48671110 -202016744 - AluSx SINE Alu -10 302 1 2249 94 3 3 chr2 48671349 48671648 -202016206 - AluSq SINE Alu -14 299 1 187 336 71 0 chr2 48672926 48673039 -202014815 - L2 LINE L2 -648 2666 2546 2292 77 14 0 chr2 48673194 48673480 -202014374 + AluY SINE Alu 5 294 -17 619 218 28 79 chr2 48673529 48673781 -202014073 - L1M4 LINE L1 -1774 4372 4134 477 261 68 0 chr2 48673874 48674050 -202013804 - L1M4 LINE L1 -2618 3528 3341 1818 175 18 0 chr2 48674051 48674336 -202013518 - AluJb SINE Alu -22 290 1 1752 167 13 10 chr2 48674999 48675305 -202012549 - AluJb SINE Alu -3 309 3 303 368 54 12 chr2 48676815 48677014 -202010840 - MIR SINE MIR -53 209 6 230 227 0 15 chr2 48677835 48677901 -202009953 + L1M4 LINE L1 3422 3486 -2660 391 238 182 21 chr2 48677904 48678047 -202009807 + MIR SINE MIR 96 261 -1 364 209 22 33 chr2 48678301 48678392 -202009462 + L1ME4a LINE L1 5946 6035 -86 1761 195 15 9 chr2 48678610 48678949 -202008905 + MER58B DNA MER1_type 1 341 0 1214 120 176 23 chr2 48679005 48679221 -202008633 + MER1B DNA MER1_type 131 339 0 252 256 77 19 chr2 48679360 48679516 -202008338 - L1ME3A LINE L1 -224 5946 5782 325 315 134 50 chr2 48679570 48679868 -202007986 + L2 LINE L2 2340 2662 -652 453 341 128 9 chr2 48679885 48680096 -202007758 + L2 LINE L2 2824 3059 -254 4255 106 9 5 chr2 48680338 48680968 -202006886 - MER41B LTR ERV1 0 635 3 264 93 23 0 chr2 48681498 48681541 -202006313 + MER116 DNA Mariner 37 80 0 746 201 138 16 chr2 48683149 48683338 -202004516 - MER58C DNA MER1_type -3 212 1 344 164 0 15 chr2 48683346 48683413 -202004441 - Charlie5 DNA MER1_type -27 2585 2520 226 268 49 0 chr2 48683416 48683498 -202004356 + HAL1 LINE L1 2422 2507 0 251 298 26 53 chr2 48683516 48683667 -202004187 - L2 LINE L2 -2566 748 602 2331 102 3 0 chr2 48684405 48684709 -202003145 + AluSx SINE Alu 1 305 -7 207 245 19 0 chr2 48689723 48689776 -201998078 + (TA)n Simple_repeat Simple_repeat 2 55 0 2346 88 10 3 chr2 48690393 48690701 -201997153 - AluSq SINE Alu -3 310 1 340 318 47 23 chr2 48691144 48691273 -201996581 - L2 LINE L2 -3 3269 3138 1012 263 125 23 chr2 48691397 48691967 -201995887 - L2 LINE L2 -340 2974 2260 1312 149 20 5 chr2 48691989 48692190 -201995664 + AluJo SINE Alu 1 204 -108 265 224 45 15 chr2 48692649 48692716 -201995138 - L2 LINE L2 -3 3310 3242 2265 112 0 0 chr2 48693995 48694300 -201993554 - AluSx SINE Alu -2 310 6 297 324 83 0 chr2 48694325 48694433 -201993421 - MIR SINE MIR -143 119 3 855 306 81 28 chr2 48694620 48695070 -201992784 + L2 LINE L2 2818 3296 -17 379 153 111 0 chr2 48695070 48695142 -201992712 + MADE1 DNA Mariner 1 80 0 855 306 81 28 chr2 48695142 48695162 -201992692 + L2 LINE L2 3296 3313 0 537 338 101 43 chr2 48695176 48695643 -201992211 - L3 LINE CR1 -1081 496 3 2403 103 0 0 chr2 48696071 48696381 -201991473 + AluSx SINE Alu 1 310 -2 253 305 232 17 chr2 48697572 48697749 -201990105 + MIR SINE MIR 38 252 -10 306 0 0 0 chr2 48698278 48698312 -201989542 + (CA)n Simple_repeat Simple_repeat 2 35 0 503 234 18 0 chr2 48698559 48698670 -201989184 + L2 LINE L2 3201 3313 0 1947 117 41 17 chr2 48698847 48699138 -201988716 + AluSx SINE Alu 1 298 -14 2086 121 4 0 chr2 48699796 48700077 -201987777 + AluSx SINE Alu 14 295 -17 1991 132 30 0 chr2 48700077 48700372 -201987482 + AluSx SINE Alu 1 304 -8 3786 177 69 29 chr2 48700927 48701200 -201986654 - Charlie1 DNA MER1_type 0 2761 2500 1817 148 0 11 chr2 48701200 48701471 -201986383 + AluJb SINE Alu 1 268 -44 309 26 0 0 chr2 48701478 48701516 -201986338 + (CA)n Simple_repeat Simple_repeat 1 38 0 3786 177 69 29 chr2 48701516 48702074 -201985780 - Charlie1 DNA MER1_type -266 2495 1888 1134 180 0 5 chr2 48702106 48702295 -201985559 - AluJo SINE Alu -124 188 1 5965 205 93 21 chr2 48702297 48703777 -201984077 - Charlie1 DNA MER1_type -1174 1587 1 2257 106 3 22 chr2 48704028 48704340 -201983514 + AluSx SINE Alu 1 306 -6 1959 115 0 0 chr2 48704620 48704880 -201982974 + AluSx SINE Alu 1 260 -52 199 278 139 28 chr2 48704977 48705121 -201982733 - L2 LINE L2 -239 3033 2874 582 265 127 82 chr2 48705354 48705781 -201982073 + LTR16A LTR ERVL 5 450 0 306 0 0 0 chr2 48705802 48705836 -201982018 + (CA)n Simple_repeat Simple_repeat 2 35 0 204 135 0 0 chr2 48705846 48705883 -201981971 + (TATG)n Simple_repeat Simple_repeat 2 38 0 301 281 151 14 chr2 48706443 48706582 -201981272 - MIR SINE MIR -81 181 24 817 257 119 46 chr2 48706698 48707111 -201980743 + LTR16C LTR ERVL 49 491 0 1648 171 12 37 chr2 48709700 48710045 -201977809 + MER33 DNA MER1_type 1 318 -6 260 287 184 40 chr2 48711564 48711738 -201976116 + MIR SINE MIR 32 230 -32 1366 302 23 21 chr2 48711866 48712426 -201975428 + L1MEc LINE L1 57 617 -5779 2272 257 81 21 chr2 48712431 48713346 -201974508 + L1MEc LINE L1 661 1630 -4766 12361 139 26 28 chr2 48713357 48713409 -201974445 + Ricksha_c DNA DNA 27 78 -3189 1736 134 12 102 chr2 48713409 48713752 -201974102 + AluSx SINE Alu 1 312 0 12361 139 26 28 chr2 48713752 48714721 -201973133 + Ricksha_c DNA DNA 78 1048 -2219 1895 159 0 19 chr2 48714721 48715036 -201972818 + AluJb SINE Alu 1 309 -3 2214 104 3 3 chr2 48715045 48715344 -201972510 + AluSq SINE Alu 1 299 -14 12361 139 26 28 chr2 48715344 48716379 -201971475 + Ricksha_c DNA DNA 1056 2046 -13 6536 237 42 32 chr2 48716381 48718938 -201968916 + L1MEc LINE L1 1624 4180 -2035 1813 180 3 81 chr2 48718938 48719286 -201968568 + MLT2D LTR ERVL 22 348 -66 1686 173 28 99 chr2 48719286 48719679 -201968175 + MLT1A1 LTR MaLR 1 365 0 1813 180 3 81 chr2 48719679 48719742 -201968112 + MLT2D LTR ERVL 348 414 0 2050 145 3 3 chr2 48719770 48720067 -201967787 + AluJo SINE Alu 7 303 -9 2994 207 32 50 chr2 48720077 48720291 -201967563 + L1MEc LINE L1 4631 4847 -1388 2198 223 84 48 chr2 48720291 48720985 -201966869 - MER72 LTR ERV1 0 722 4 2994 207 32 50 chr2 48720985 48721880 -201965974 + L1MEc LINE L1 4847 5724 -511 591 117 0 0 chr2 48721987 48722081 -201965773 + (CA)n Simple_repeat Simple_repeat 2 95 0 202 247 0 41 chr2 48722751 48722824 -201965030 + CT-rich Low_complexity Low_complexity 2 71 0 271 264 34 27 chr2 48722874 48723022 -201964832 + (TCTCTG)n Simple_repeat Simple_repeat 4 152 0 1667 175 11 0 chr2 48723589 48723863 -201963991 + AluJb SINE Alu 11 287 -25 267 263 38 38 chr2 48723999 48724091 -201963763 + L1M4 LINE L1 4064 4158 -1988 2126 148 0 0 chr2 48724091 48724401 -201963453 + AluSx SINE Alu 1 310 -2 267 263 38 38 chr2 48724401 48724441 -201963413 + L1M4 LINE L1 4157 4196 -1950 270 210 0 40 chr2 48724441 48724512 -201963342 + GA-rich Low_complexity Low_complexity 1 68 -28 1532 206 31 0 chr2 48724512 48724799 -201963055 + AluJb SINE Alu 1 296 -16 270 210 0 40 chr2 48724799 48724827 -201963027 + GA-rich Low_complexity Low_complexity 68 96 0 325 162 14 14 chr2 48724895 48724969 -201962885 + GA-rich Low_complexity Low_complexity 2 75 0 1925 152 58 30 chr2 48725595 48725957 -201961897 + MLT1A2 LTR MaLR 1 372 -2 307 231 162 26 chr2 48726579 48726696 -201961158 - MIR SINE MIR -50 212 80 256 354 141 10 chr2 48726776 48726974 -201960880 + L2 LINE L2 2866 3089 -183 1368 229 103 74 chr2 48727012 48727509 -201960345 + MLT1J LTR MaLR 1 511 0 306 204 41 61 chr2 48727533 48727631 -201960223 - MIR SINE MIR -14 248 153 450 326 61 7 chr2 48727678 48727825 -201960029 - L2 LINE L2 -18 3254 3100 2067 262 57 16 chr2 48727832 48728458 -201959396 - HsTC2c DNA Tc2 -2 727 82 1537 173 101 0 chr2 48728465 48728742 -201959112 + AluJb SINE Alu 1 305 -7 612 239 8 0 chr2 48728809 48728939 -201958915 + L1MB5 LINE L1 5979 6109 -65 298 173 67 48 chr2 48728947 48729051 -201958803 + L1MC1 LINE L1 6211 6316 -17 415 179 97 2 chr2 48729239 48729389 -201958465 + MER58A DNA MER1_type 37 224 0 1560 199 113 41 chr2 48729532 48729974 -201957880 - L1MB8 LINE L1 -6 6172 5699 439 252 29 34 chr2 48729973 48729985 -201957869 - L1MEc LINE L1 -4130 2266 2255 * 2059 155 54 38 chr2 48729985 48730353 -201957501 - MLT1A2 LTR MaLR 0 374 1 439 252 29 34 chr2 48730353 48730578 -201957276 - L1MEc LINE L1 -4141 2255 2030 651 189 38 0 chr2 48730578 48730710 -201957144 + MER115 DNA AcHobo 557 693 0 541 288 35 48 chr2 48730785 48730986 -201956868 - L1ME4a LINE L1 -221 5900 5704 1921 144 0 29 chr2 48730986 48731292 -201956562 + AluSx SINE Alu 1 297 -15 541 288 35 48 chr2 48731292 48731465 -201956389 - L1ME4a LINE L1 -417 5704 5530 241 265 0 15 chr2 48731533 48731601 -201956253 - L1ME4a LINE L1 -871 5429 5363 438 171 0 0 chr2 48732128 48732198 -201955656 + AluJ/FLAM SINE Alu 21 90 -222 257 327 44 0 chr2 48732350 48732463 -201955391 + MIR SINE MIR 117 234 -28 191 217 22 0 chr2 48732588 48732634 -201955220 - MIR SINE MIR -114 148 102 240 307 209 7 chr2 48733090 48733243 -201954611 - MIR3 SINE MIR -23 185 2 546 235 141 0 chr2 48733648 48733797 -201954057 + MER5B DNA MER1_type 1 170 -8 315 300 16 45 chr2 48734284 48734424 -201953430 - MIR SINE MIR -65 143 61 503 110 22 66 chr2 48734940 48735031 -201952823 - AluSc SINE Alu -120 189 103 803 108 0 0 chr2 48735134 48735236 -201952618 - AluSp SINE Alu -210 103 2 1211 200 80 48 chr2 48735411 48735786 -201952068 + MLT1C LTR MaLR 1 387 -80 409 284 136 12 chr2 48735814 48735983 -201951871 - MLT1K LTR MaLR -359 229 40 318 364 58 21 chr2 48736150 48736392 -201951462 - L2 LINE L2 -212 3060 2810 766 234 144 34 chr2 48736635 48736752 -201951102 - MER5C DNA MER1_type 0 324 221 2022 120 3 27 chr2 48736752 48737071 -201950783 - AluJb SINE Alu 0 312 1 766 234 144 34 chr2 48737071 48737243 -201950611 - MER5C DNA MER1_type -103 221 2 413 230 230 12 chr2 48737393 48737554 -201950300 - MLT1J LTR MaLR -314 197 2 996 235 109 68 chr2 48737636 48738141 -201949713 - MLT1H LTR MaLR -11 613 14 1066 209 162 32 chr2 48738701 48739102 -201948752 + MLT1D LTR MaLR 1 453 -52 4390 159 15 37 chr2 48739116 48739231 -201948623 - L1MB4 LINE L1 -3 6177 6061 2112 133 6 19 chr2 48739231 48739547 -201948307 - AluSx SINE Alu 0 312 1 4390 159 15 37 chr2 48739547 48740339 -201947515 - L1MB4 LINE L1 -119 6061 5290 334 167 0 15 chr2 48740339 48740405 -201947449 + MLT1C LTR MaLR 402 466 -1 236 338 0 0 chr2 48740598 48740672 -201947182 - L2 LINE L2 -1512 1802 1729 299 255 153 10 chr2 48740851 48740949 -201946905 - MIR3 SINE MIR -8 200 89 258 319 56 14 chr2 48741288 48741432 -201946422 + MLT2E LTR ERVL 35 184 -444 243 308 0 13 chr2 48741606 48741684 -201946170 + LTR33A LTR ERVL 446 522 -1 262 285 73 19 chr2 48741735 48741862 -201945992 - MIR SINE MIR -74 188 4 331 301 117 18 chr2 48742652 48742815 -201945039 - MIR3 SINE MIR -27 181 3 245 336 52 0 chr2 48743277 48743393 -201944461 - MIR SINE MIR -59 149 28 215 293 24 49 chr2 48745674 48745756 -201942098 + L2 LINE L2 3232 3311 -2 188 162 0 27 chr2 48745767 48745804 -201942050 - L2 LINE L2 -226 3046 3011 2105 114 17 0 chr2 48747087 48747376 -201940478 - AluSx SINE Alu -18 294 1 638 164 4 118 chr2 48747481 48747718 -201940136 - Charlie5 DNA MER1_type -27 2585 2376 674 185 37 15 chr2 48747718 48747853 -201940001 - MLT1C LTR MaLR 0 467 330 2006 153 14 0 chr2 48747892 48748186 -201939668 + AluJo SINE Alu 1 298 -14 228 86 0 0 chr2 48748186 48748221 -201939633 + (CAAG)n Simple_repeat Simple_repeat 2 36 0 2313 112 129 15 chr2 48748255 48748667 -201939187 + MER4C LTR ERV1 6 464 -1 913 182 131 33 chr2 48748679 48748954 -201938900 - MLT1C LTR MaLR -154 313 12 1331 176 20 4 chr2 48749086 48749336 -201938518 - MER33 DNA MER1_type -70 254 1 2369 124 5 45 chr2 48749546 48749925 -201937929 + THE1B LTR MaLR 1 364 0 462 18 0 0 chr2 48750836 48750891 -201936963 + (CA)n Simple_repeat Simple_repeat 1 55 0 620 149 66 8 chr2 48751413 48751480 -201936374 + MER5B DNA MER1_type 51 113 -65 186 43 0 0 chr2 48751480 48751503 -201936351 + (TA)n Simple_repeat Simple_repeat 2 24 0 620 149 66 8 chr2 48751503 48751556 -201936298 + MER5B DNA MER1_type 113 178 0 193 378 0 0 chr2 48752548 48752622 -201935232 + MIR SINE MIR 68 141 -67 695 150 0 0 chr2 48752914 48753014 -201934840 + AluSq/x SINE Alu 36 135 -177 2162 129 0 0 chr2 48753014 48753301 -201934553 + AluSx SINE Alu 1 287 -25 248 342 9 27 chr2 48753761 48753816 -201934038 - L2 LINE L2 -30 3283 3229 1950 164 30 35 chr2 48753816 48754182 -201933672 + MLT1A1 LTR MaLR 1 364 -1 248 342 9 27 chr2 48754182 48754237 -201933617 - L2 LINE L2 -84 3229 3175 1410 149 37 0 chr2 48754992 48755206 -201932648 + AluSg/x SINE Alu 85 306 -6 278 206 183 52 chr2 48757045 48757297 -201930557 - LTR33 LTR ERVL -1 520 236 879 174 44 65 chr2 48757336 48757654 -201930200 + MLT1B LTR MaLR 1 390 0 522 271 28 0 chr2 48757654 48757830 -201930024 - LTR33 LTR ERVL -325 196 16 270 0 0 0 chr2 48758074 48758104 -201929750 + (A)n Simple_repeat Simple_repeat 1 30 0 945 122 0 0 chr2 48758104 48758227 -201929627 - AluSg/x SINE Alu -37 273 151 495 212 1 19 chr2 48758320 48758451 -201929403 + L1ME2 LINE L1 6043 6178 0 208 306 28 14 chr2 48758452 48758524 -201929330 + MIR SINE MIR 189 261 -1 332 290 0 9 chr2 48759000 48759107 -201928747 + MIR SINE MIR 31 136 -126 282 29 0 0 chr2 48759263 48759298 -201928556 + (T)n Simple_repeat Simple_repeat 1 35 0 209 250 40 26 chr2 48759767 48759843 -201928011 + MIR SINE MIR 61 137 -71 254 222 56 89 chr2 48759898 48759988 -201927866 + L2 LINE L2 3208 3294 -19 1500 122 66 0 chr2 48759997 48760210 -201927644 - AluSg/x SINE Alu -5 305 79 1089 154 0 2 chr2 48761296 48761757 -201926097 + (AGCTG)n Simple_repeat Simple_repeat 1 640 0 287 314 73 6 chr2 48762486 48762641 -201925213 + MIR SINE MIR 23 190 -71 336 332 101 15 chr2 48763548 48763747 -201924107 + L2 LINE L2 3077 3292 -21 439 277 71 58 chr2 48765035 48765256 -201922598 - MIR SINE MIR -37 225 4 444 274 77 6 chr2 48765353 48765521 -201922333 + MIR SINE MIR 67 246 -16 255 250 0 0 chr2 48766007 48766059 -201921795 - MIR SINE MIR -32 230 179 183 203 270 14 chr2 48766418 48766492 -201921362 + MIR SINE MIR 38 130 -132 21 0 0 0 chr2 48766811 48766832 -201921022 + AT_rich Low_complexity Low_complexity 1 21 0 256 192 58 0 chr2 48766990 48767042 -201920812 - MIR3 SINE MIR -45 163 109 1131 161 117 16 chr2 48767069 48767317 -201920537 - ORSL DNA AcHobo 0 275 3 640 172 90 0 chr2 48767540 48767662 -201920192 - FLAM_A SINE Alu 0 133 1 308 267 146 44 chr2 48769046 48769230 -201918624 + MIR SINE MIR 10 212 -50 695 213 15 116 chr2 48769653 48769921 -201917933 - MIR SINE MIR 0 262 22 241 250 53 13 chr2 48770334 48770410 -201917444 + MIR SINE MIR 76 154 -108 244 282 47 0 chr2 48770775 48770860 -201916994 - MIR SINE MIR -60 202 114 651 198 16 96 chr2 48771329 48771516 -201916338 - MER5B DNA MER1_type -3 175 4 184 242 30 45 chr2 48772105 48772171 -201915683 - L2 LINE L2 0 3272 3208 895 174 32 0 chr2 48772300 48772455 -201915399 - AluJ SINE Alu -30 282 123 304 157 24 121 chr2 48772456 48772539 -201915315 - L1MCa LINE L1 -4363 2063 1989 820 148 8 0 chr2 48772539 48772661 -201915193 - AluJ SINE Alu -189 123 1 320 265 128 0 chr2 48773130 48773232 -201914622 - L2 LINE L2 -2 3311 3197 253 337 0 0 chr2 48773285 48773374 -201914480 - L1ME4a LINE L1 -60 6061 5973 332 290 100 0 chr2 48773389 48773489 -201914365 - L1ME4a LINE L1 -248 5873 5764 2153 118 3 0 chr2 48773617 48773929 -201913925 + AluSx SINE Alu 1 313 0 1930 146 11 40 chr2 48774762 48775112 -201912742 - MER2 DNA MER2_type 0 345 6 304 170 75 0 chr2 48775158 48775211 -201912643 + MIR SINE MIR 87 143 -65 328 260 71 45 chr2 48775426 48775580 -201912274 - MIR SINE MIR -26 236 79 298 177 260 31 chr2 48775592 48775688 -201912166 + MER63 DNA MER1_type 1 744 -318 189 247 124 67 chr2 48775840 48775929 -201911925 - MER5A DNA MER1_type -40 149 56 193 269 15 30 chr2 48775856 48775923 -201911931 + MER5B DNA MER1_type 63 128 -50 341 184 0 71 chr2 48776172 48776270 -201911584 - HsTC2 DNA Tc2 -3 1895 1805 235 102 61 0 chr2 48776250 48776299 -201911555 - HsTC2 DNA Tc2 -1845 53 2 * 397 249 160 25 chr2 48776461 48776648 -201911206 - MIR SINE MIR -3 259 45 1856 146 54 0 chr2 48776710 48776990 -201910864 + AluJb SINE Alu 1 295 -17 324 0 0 0 chr2 48777758 48777794 -201910060 + (TG)n Simple_repeat Simple_repeat 2 37 0 1505 40 0 6 chr2 48778028 48778202 -201909652 + AluY SINE Alu 96 268 -43 237 143 77 154 chr2 48778202 48778230 -201909624 + Charlie4a DNA MER1_type 246 275 -1686 2181 133 3 0 chr2 48778230 48778538 -201909316 + AluSx SINE Alu 1 309 -3 237 143 77 154 chr2 48778538 48778600 -201909254 + Charlie4a DNA MER1_type 275 329 -179 576 179 45 0 chr2 48778627 48778761 -201909093 + Charlie4a DNA MER1_type 314 453 -55 1991 110 3 43 chr2 48778916 48779216 -201908638 + AluSx SINE Alu 9 296 -16 1077 134 0 50 chr2 48779216 48779395 -201908459 + AluSg/x SINE Alu 132 301 -9 1707 201 3 0 chr2 48779611 48779931 -201907923 - AluJb SINE Alu 0 321 1 2623 65 0 0 chr2 48780118 48780427 -201907427 + AluY SINE Alu 1 309 -2 334 297 65 87 chr2 48780566 48780751 -201907103 - MER5A DNA MER1_type 0 189 9 827 128 34 74 chr2 48781820 48781969 -201905885 - FLAM_C SINE Alu 0 143 1 3520 142 89 19 chr2 48781979 48782629 -201905225 - L1MD1 LINE L1 0 6242 5547 2274 165 66 109 chr2 48782630 48782969 -201904885 - L1MDa LINE L1 -4241 2299 2008 2353 107 0 0 chr2 48782969 48783277 -201904577 + AluSg1 SINE Alu 1 308 -1 2274 165 66 109 chr2 48783277 48783669 -201904185 - L1MDa LINE L1 -4532 2008 1600 445 326 95 0 chr2 48784776 48784966 -201902888 - MIR SINE MIR -28 234 27 800 212 16 7 chr2 48786204 48786390 -201901464 - MLT1L LTR MaLR -5 610 323 702 246 32 52 chr2 48786447 48786695 -201901159 - MLT1L LTR MaLR -331 284 42 322 199 20 88 chr2 48786711 48786830 -201901024 - MIR SINE MIR -52 156 44 190 252 148 52 chr2 48787043 48787198 -201900656 + L2 LINE L2 1741 1910 -1404 308 247 216 0 chr2 48787608 48787705 -201900149 + MIR SINE MIR 30 147 -115 1522 189 31 20 chr2 48787710 48788059 -201899795 - MLT1A1 LTR MaLR -12 353 1 329 296 28 0 chr2 48788060 48788168 -201899686 + MIR SINE MIR 152 262 0 358 305 108 0 chr2 48788269 48788436 -201899418 - MIR SINE MIR -76 186 2 203 178 0 22 chr2 48789479 48789524 -201898330 + GA-rich Low_complexity Low_complexity 1 44 0 2339 100 0 0 chr2 48790416 48790715 -201897139 - AluSq SINE Alu -14 299 1 463 298 82 6 chr2 48790748 48790906 -201896948 + MIR3 SINE MIR 33 202 -6 594 133 0 0 chr2 48791232 48791315 -201896539 + AluJ/FLAM SINE Alu 2 84 -228 455 358 70 14 chr2 48791319 48791604 -201896250 - L2 LINE L2 -168 3104 2804 823 156 87 12 chr2 48791884 48792057 -201895797 + MER20 DNA MER1_type 34 219 0 247 333 39 0 chr2 48792212 48792314 -201895540 - MIR SINE MIR -85 123 18 565 258 137 0 chr2 48792992 48793182 -201894672 + MIR SINE MIR 22 237 -25 222 37 0 0 chr2 48793192 48793219 -201894635 + (TTA)n Simple_repeat Simple_repeat 3 29 0 287 240 106 19 chr2 48795065 48795169 -201892685 + L2 LINE L2 2941 3053 -219 522 279 93 0 chr2 48795267 48795439 -201892415 + MLT1I LTR MaLR 7 194 -215 459 246 8 23 chr2 48795494 48795624 -201892230 + MLT1I LTR MaLR 282 409 0 2080 163 75 43 chr2 48795784 48796221 -201891633 - MSTB2 LTR MaLR -6 451 1 299 100 0 0 chr2 48796421 48796461 -201891393 - Alu SINE Alu -260 41 2 241 295 0 0 chr2 48796958 48797019 -201890835 + (TG)n Simple_repeat Simple_repeat 2 62 0 468 302 176 17 chr2 48797564 48797865 -201889989 + L2 LINE L2 2924 3272 0 481 286 61 90 chr2 48798280 48798658 -201889196 - L1ME4a LINE L1 -179 5942 5576 1872 154 34 0 chr2 48798669 48798967 -201888887 + AluSx SINE Alu 1 308 -4 1129 170 39 12 chr2 48798967 48799366 -201888488 - LTR54 LTR ERV1 -8 502 1 523 288 171 19 chr2 48799777 48799982 -201887872 - MIR SINE MIR -7 255 20 767 95 26 14 chr2 48800332 48800611 -201887243 + (CA)n Simple_repeat Simple_repeat 1 282 0 1286 269 85 29 chr2 48800717 48801443 -201886411 + L1ME3A LINE L1 4342 5108 -1038 480 147 0 0 chr2 48801453 48801521 -201886333 + AluS SINE Alu 1 68 -244 543 221 7 15 chr2 48801524 48801660 -201886194 + L1MC5 LINE L1 7777 7911 -50 850 283 125 19 chr2 48801762 48802299 -201885555 + L1ME3A LINE L1 5258 5851 -319 301 240 35 157 chr2 48802515 48802661 -201885193 + L1ME3A LINE L1 5963 6125 -45 330 26 0 0 chr2 48802661 48802700 -201885154 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1893 163 0 0 chr2 48802702 48802984 -201884870 - AluJo SINE Alu -30 282 1 301 240 35 157 chr2 48802984 48803063 -201884791 + L1ME3A LINE L1 6126 6163 -7 192 317 130 8 chr2 48803350 48803473 -201884381 + L2 LINE L2 3134 3271 -1 208 276 61 61 chr2 48803734 48803832 -201884022 + MER91C DNA MER1_type 16 113 -27 192 250 20 27 chr2 48804031 48804179 -201883675 + CT-rich Low_complexity Low_complexity 4 150 0 202 222 0 19 chr2 48804739 48804793 -201883061 + GA-rich Low_complexity Low_complexity 3 55 0 563 192 32 24 chr2 48805335 48805460 -201882394 - MIR SINE MIR -101 161 36 398 283 28 45 chr2 48805820 48805997 -201881857 + MIR SINE MIR 47 220 -42 528 270 45 72 chr2 48805997 48806219 -201881635 - MIR SINE MIR 0 262 47 200 308 0 15 chr2 48806904 48806969 -201880885 - L3 LINE CR1 0 1577 1514 509 271 48 48 chr2 48806987 48807232 -201880622 - MIR SINE MIR -6 256 9 273 320 148 44 chr2 48807222 48807472 -201880382 - L3 LINE CR1 -57 1520 1245 * 312 311 141 0 chr2 48807510 48807687 -201880167 + MIR SINE MIR 61 262 0 216 267 67 0 chr2 48807703 48807763 -201880091 + MIR SINE MIR 101 164 -98 2347 94 0 25 chr2 48808067 48808386 -201879468 + AluSx SINE Alu 1 311 -1 257 89 44 0 chr2 48809034 48809079 -201878775 + Alu SINE Alu 253 299 -3 426 289 21 58 chr2 48809955 48810145 -201877709 - MIR SINE MIR -33 229 47 233 240 154 58 chr2 48810972 48811076 -201876778 + MIR SINE MIR 32 145 -63 229 319 7 101 chr2 48811353 48811451 -201876403 - L2 LINE L2 -195 3077 2994 2052 107 10 24 chr2 48811451 48811742 -201876112 + AluSq SINE Alu 14 300 -13 229 319 7 101 chr2 48811742 48811781 -201876073 - L2 LINE L2 -278 2994 2953 13584 37 1 1 chr2 48811860 48813570 -201874284 - L1P LINE L1 -1284 4862 3153 603 286 104 5 chr2 48814172 48814364 -201873490 + MIR SINE MIR 14 224 -38 251 325 68 43 chr2 48814413 48814530 -201873324 + L3b LINE CR1 1332 1451 -132 588 209 320 4 chr2 48814832 48815066 -201872788 - MER5C DNA MER1_type 0 324 17 1783 135 15 74 chr2 48815306 48815631 -201872223 - AluJo SINE Alu -6 306 1 182 351 135 0 chr2 48815837 48815948 -201871906 - MIR SINE MIR -9 253 128 224 253 46 35 chr2 48816008 48816095 -201871759 + MER5A DNA MER1_type 7 94 -95 341 264 171 20 chr2 48816256 48816326 -201871528 + L1ME4a LINE L1 5757 5815 -306 2169 129 0 0 chr2 48816326 48816620 -201871234 + AluSx SINE Alu 1 294 -18 341 264 171 20 chr2 48816620 48816795 -201871059 + L1ME4a LINE L1 5815 6039 -82 521 292 209 12 chr2 48817119 48817458 -201870396 + L2 LINE L2 2866 3271 -1 294 306 98 17 chr2 48819009 48819182 -201868672 + MIR SINE MIR 21 207 -55 291 151 0 0 chr2 48819526 48819579 -201868275 + MLT1E3 LTR MaLR 572 624 0 2133 143 7 0 chr2 48819580 48819887 -201867967 + AluJb SINE Alu 1 309 -3 691 302 98 32 chr2 48819914 48820112 -201867742 - L1MEd LINE L1 -4704 1606 1423 2428 72 0 16 chr2 48820112 48820416 -201867438 + AluY SINE Alu 2 300 -11 691 302 98 32 chr2 48820416 48821207 -201866647 - L1MEd LINE L1 -4887 1423 534 224 288 85 90 chr2 48821282 48821494 -201866360 + L2 LINE L2 3039 3249 -23 189 0 0 0 chr2 48822201 48822222 -201865632 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2212 90 0 0 chr2 48822230 48822496 -201865358 - AluSq SINE Alu -47 266 1 739 181 0 30 chr2 48822520 48822653 -201865201 + FLAM_A SINE Alu 4 132 -1 1886 154 3 3 chr2 48822856 48823149 -201864705 + AluJb SINE Alu 13 305 -7 23 54 0 0 chr2 48823254 48823291 -201864563 + AT_rich Low_complexity Low_complexity 1 37 0 469 335 23 90 chr2 48823337 48823522 -201864332 + L1MEd LINE L1 81 240 -5879 1772 144 3 88 chr2 48823522 48823735 -201864119 - AluJo SINE Alu 0 312 137 2376 84 0 10 chr2 48823735 48824034 -201863820 + AluSq SINE Alu 1 296 -17 1772 144 3 88 chr2 48824034 48824161 -201863693 - AluJo SINE Alu -175 137 1 469 335 23 90 chr2 48824161 48824276 -201863578 + L1MEd LINE L1 240 361 -5758 3110 207 86 62 chr2 48824276 48825102 -201862752 + MER21B LTR ERV1 1 846 -17 824 304 60 17 chr2 48825148 48825500 -201862354 + L1MEd LINE L1 375 741 -5378 1699 97 7 77 chr2 48825825 48826125 -201861729 + MER1B DNA MER1_type 61 339 0 1417 233 82 40 chr2 48826330 48826857 -201860997 - L1M4 LINE L1 -1717 4429 3881 23 54 0 0 chr2 48827084 48827121 -201860733 + AT_rich Low_complexity Low_complexity 1 37 0 2158 127 0 3 chr2 48827140 48827431 -201860423 + AluSx SINE Alu 1 290 -22 864 258 9 0 chr2 48827638 48827851 -201860003 - Charlie2 DNA MER1_type -2200 582 368 2154 118 7 0 chr2 48828222 48828518 -201859336 - AluSq SINE Alu -15 298 1 250 169 17 17 chr2 48829232 48829291 -201858563 - MLT1J LTR MaLR -7 504 446 1971 286 93 17 chr2 48829307 48830067 -201857787 - L2 LINE L2 -643 2671 1854 302 212 0 0 chr2 48830069 48830135 -201857719 - L2 LINE L2 -1633 1681 1616 329 242 77 33 chr2 48830226 48830317 -201857537 + L2 LINE L2 3178 3272 0 220 184 0 0 chr2 48830325 48830363 -201857491 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 794 106 23 30 chr2 48830475 48830607 -201857247 + FLAM_C SINE Alu 3 133 0 2125 58 18 7 chr2 48830838 48831147 -201856707 + AluSg SINE Alu 2 313 0 24 0 0 0 chr2 48831931 48831955 -201855899 + GC_rich Low_complexity Low_complexity 1 24 0 513 296 167 39 chr2 48832428 48832942 -201854912 + L2 LINE L2 2377 2956 -358 260 266 16 0 chr2 48834297 48834361 -201853493 + CT-rich Low_complexity Low_complexity 2 66 0 841 161 0 0 chr2 48834364 48834482 -201853372 - AluJb SINE Alu -194 118 1 227 323 188 0 chr2 48834935 48835031 -201852823 - L2 LINE L2 -38 3234 3121 196 310 26 52 chr2 48835120 48835236 -201852618 - L2 LINE L2 -168 3104 2992 1684 119 16 16 chr2 48835405 48835649 -201852205 - AluSx SINE Alu -23 289 46 2441 91 3 0 chr2 48835788 48836095 -201851759 + AluSx SINE Alu 1 308 -4 1685 150 70 31 chr2 48836172 48836458 -201851396 - AluJo SINE Alu -15 297 1 235 288 0 0 chr2 48836459 48836525 -201851329 - MARNA DNA Mariner -55 531 466 201 314 151 25 chr2 48837493 48837652 -201850202 + L2 LINE L2 2912 3090 -182 180 200 0 0 chr2 48838448 48838498 -201849356 + (CA)n Simple_repeat Simple_repeat 1 50 0 1880 174 0 10 chr2 48838652 48838951 -201848903 + AluJb SINE Alu 1 296 -16 1916 168 3 40 chr2 48839521 48839843 -201848011 + AluJb SINE Alu 3 312 0 959 196 0 0 chr2 48840223 48840381 -201847473 + AluJb SINE Alu 147 304 -8 1931 141 29 35 chr2 48840428 48840740 -201847114 + AluJb SINE Alu 1 310 -2 219 125 0 0 chr2 48841480 48841520 -201846334 + (T)n Simple_repeat Simple_repeat 1 40 0 2845 54 14 3 chr2 48841995 48842346 -201845508 - THE1A LTR MaLR 0 355 1 10675 74 52 9 chr2 48842346 48843862 -201843992 - THE1A-int LTR MaLR 0 1580 1 2877 54 11 0 chr2 48843862 48844213 -201843641 - THE1A LTR MaLR 0 355 1 225 245 0 0 chr2 48846135 48846184 -201841670 + MIR SINE MIR 106 154 -108 551 250 152 29 chr2 48846211 48846415 -201841439 + MIR SINE MIR 20 248 -14 183 129 0 0 chr2 48846564 48846595 -201841259 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 1084 283 52 48 chr2 48846826 48847081 -201840773 + HAL1 LINE L1 617 870 -1637 2273 97 23 0 chr2 48847081 48847381 -201840473 - AluSg SINE Alu -3 307 1 1084 283 52 48 chr2 48847381 48847765 -201840089 + HAL1 LINE L1 870 1258 -1249 921 228 34 17 chr2 48848070 48848303 -201839551 + MIR SINE MIR 5 241 -21 335 285 39 22 chr2 48848334 48848513 -201839341 - MLT1K LTR MaLR -368 220 39 317 322 85 8 chr2 48849694 48849812 -201838042 - L1ME LINE L1 -483 5638 5512 211 239 0 45 chr2 48849923 48849990 -201837864 + (TTTA)n Simple_repeat Simple_repeat 3 66 0 937 144 0 0 chr2 48850085 48850217 -201837637 - FLAM_C SINE Alu 0 133 2 640 43 22 0 chr2 48850338 48850430 -201837424 + (TCTA)n Simple_repeat Simple_repeat 3 96 0 3164 218 85 33 chr2 48850490 48851707 -201836147 + L1MDa LINE L1 1 1368 -5162 2148 114 10 3 chr2 48851707 48852013 -201835841 + AluSg SINE Alu 1 308 -2 3164 218 85 33 chr2 48852013 48852270 -201835584 + L1MDa LINE L1 1368 1610 -4920 272 239 82 45 chr2 48852502 48852636 -201835218 + MLT1K LTR MaLR 379 517 -71 357 136 0 0 chr2 48852650 48852716 -201835138 + (TCCC)n Simple_repeat Simple_repeat 4 69 0 238 310 241 0 chr2 48852992 48853108 -201834746 + L2 LINE L2 2563 2706 -608 398 337 130 42 chr2 48853168 48853577 -201834277 + L2 LINE L2 2827 3271 -1 812 203 0 0 chr2 48854340 48854473 -201833381 - FLAM_C SINE Alu -10 133 1 659 175 0 80 chr2 48855434 48855467 -201832387 + AluJo SINE Alu 11 45 -267 2447 84 3 0 chr2 48855467 48855763 -201832091 + AluSg SINE Alu 1 297 -13 659 175 0 80 chr2 48855763 48855866 -201831988 + AluJo SINE Alu 45 136 -176 427 107 0 0 chr2 48856009 48856065 -201831789 + Alu SINE Alu 2 57 -261 512 205 0 118 chr2 48857109 48857234 -201830620 + MER110A LTR ERV1 70 165 -303 1982 134 0 49 chr2 48857234 48857541 -201830313 - AluSx SINE Alu -20 292 1 512 205 0 118 chr2 48857541 48857610 -201830244 + MER110A LTR ERV1 165 241 -227 265 143 0 0 chr2 48857622 48857671 -201830183 + Alu SINE Alu 253 301 -1 2586 74 0 0 chr2 48857757 48858066 -201829788 - AluSc SINE Alu 0 309 1 297 79 0 0 chr2 48858248 48858286 -201829568 + FRAM SINE Alu 63 100 -66 420 178 0 0 chr2 48858286 48858359 -201829495 + MER110A LTR ERV1 281 353 -115 479 232 25 8 chr2 48858398 48858546 -201829308 + MER110A LTR ERV1 324 470 0 1858 166 0 3 chr2 48858780 48859087 -201828767 + AluJo SINE Alu 6 311 -1 2053 132 14 3 chr2 48859827 48860123 -201827731 - AluJb SINE Alu -13 299 1 1774 186 24 0 chr2 48860671 48860962 -201826892 + AluJb SINE Alu 1 298 -14 1834 156 0 4 chr2 48861078 48861372 -201826482 + AluSx SINE Alu 17 309 0 1729 170 11 11 chr2 48861383 48861695 -201826159 + AluJo SINE Alu 1 312 0 456 247 50 55 chr2 48861698 48861917 -201825937 + L1M4 LINE L1 2875 3092 -3054 1028 273 16 22 chr2 48861974 48862293 -201825561 + MLT1I LTR MaLR 91 407 -2 297 267 122 70 chr2 48862296 48862679 -201825175 + L1M4 LINE L1 3089 3524 -2622 2434 89 0 0 chr2 48862679 48862981 -201824873 - AluSq SINE Alu -11 302 1 297 267 122 70 chr2 48862981 48863272 -201824582 + L1M4 LINE L1 3524 3798 -2348 363 203 16 0 chr2 48863272 48863336 -201824518 + MLT1D LTR MaLR 1 65 -440 264 111 0 0 chr2 48863346 48863382 -201824472 - AluJ/FRAM SINE Alu -50 252 217 479 292 43 6 chr2 48863485 48863646 -201824208 + MIR SINE MIR 52 218 -44 352 258 128 41 chr2 48864508 48864659 -201823195 + MIR SINE MIR 18 185 -63 272 232 66 12 chr2 48864944 48865057 -201822797 + MIR3 SINE MIR 84 179 -29 2501 75 0 7 chr2 48865097 48865402 -201822452 + AluSq SINE Alu 1 303 -10 204 40 0 0 chr2 48866504 48866529 -201821325 + (CTG)n Simple_repeat Simple_repeat 2 26 0 714 209 76 6 chr2 48868917 48869089 -201818765 + L1MC4 LINE L1 7490 7673 -369 256 146 21 0 chr2 48869142 48869190 -201818664 + L1MC4 LINE L1 7994 8042 0 482 225 244 0 chr2 48869690 48869850 -201818004 + MIR SINE MIR 64 262 0 383 306 107 29 chr2 48869824 48870030 -201817824 - MIR SINE MIR 0 262 41 * 771 257 191 0 chr2 48872614 48872824 -201815030 - MIR SINE MIR 0 262 13 181 157 59 78 chr2 48872848 48872899 -201814955 - L2 LINE L2 -84 3188 3139 2000 155 10 0 chr2 48872958 48873267 -201814587 - AluJb SINE Alu 0 312 1 354 263 0 21 chr2 48873281 48873376 -201814478 - MIR SINE MIR -74 188 96 771 199 0 0 chr2 48874440 48874576 -201813278 - AluJo SINE Alu -7 305 170 702 144 50 93 chr2 48874585 48874724 -201813130 + AluJo SINE Alu 86 218 -94 1033 175 0 6 chr2 48874745 48874905 -201812949 - AluJo SINE Alu -152 160 2 21 0 0 0 chr2 48875191 48875212 -201812642 + AT_rich Low_complexity Low_complexity 1 21 0 1310 171 38 54 chr2 48875233 48875328 -201812526 - AluJo SINE Alu -77 235 140 2245 88 11 0 chr2 48875328 48875613 -201812241 - AluSc SINE Alu -21 288 1 1310 171 38 54 chr2 48875613 48875756 -201812098 - AluJo SINE Alu -172 140 1 1659 189 10 16 chr2 48876474 48876787 -201811067 - AluJo SINE Alu -1 311 1 219 239 70 0 chr2 48876877 48876948 -201810906 + GA-rich Low_complexity Low_complexity 1 76 0 351 234 255 0 chr2 48877274 48877419 -201810435 + MIR SINE MIR 74 255 -7 871 175 129 66 chr2 48877455 48877500 -201810354 - MER5C DNA MER1_type -16 308 267 1712 166 14 14 chr2 48877500 48877790 -201810064 + AluSx SINE Alu 1 290 -22 871 175 129 66 chr2 48877790 48878030 -201809824 - MER5C DNA MER1_type -57 267 5 289 235 66 0 chr2 48878401 48878499 -201809355 - L1MC/D LINE L1 -526 5595 5521 874 167 0 0 chr2 48878696 48878828 -201809026 - FLAM_A SINE Alu -1 132 1 2145 128 14 0 chr2 48879302 48879598 -201808256 - AluSq SINE Alu -9 304 5 704 216 101 0 chr2 48879818 48879966 -201807888 + FRAM SINE Alu 5 167 -9 1342 142 43 84 chr2 48880722 48881045 -201806809 + MER33 DNA MER1_type 14 323 -1 183 280 0 20 chr2 48881195 48881245 -201806609 - L2 LINE L2 -3 3310 3262 452 269 119 6 chr2 48881308 48881468 -201806386 + MER5A DNA MER1_type 4 181 -8 210 118 0 0 chr2 48881585 48881619 -201806235 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 758 161 40 0 chr2 48881655 48881779 -201806075 - FLAM_C SINE Alu -3 130 2 285 344 52 19 chr2 48881810 48881964 -201805890 - L2 LINE L2 0 3272 3114 237 268 61 24 chr2 48882286 48882368 -201805486 + MIR3 SINE MIR 76 160 -48 52 30 0 0 chr2 48882407 48882473 -201805381 + AT_rich Low_complexity Low_complexity 1 66 0 1758 175 3 3 chr2 48882551 48882836 -201805018 + AluJb SINE Alu 13 297 -15 2046 144 0 3 chr2 48883232 48883524 -201804330 - AluJo SINE Alu -21 291 1 774 171 0 27 chr2 48883885 48884031 -201803823 - FLAM_C SINE Alu 0 143 2 189 343 30 0 chr2 48884287 48884354 -201803500 - MIR SINE MIR -113 149 81 182 294 15 59 chr2 48884455 48884523 -201803331 + L2 LINE L2 1209 1273 -2041 2498 69 3 10 chr2 48884636 48884940 -201802914 - AluSx SINE Alu -10 302 1 213 240 101 73 chr2 48885524 48885703 -201802151 - L2 LINE L2 -164 3108 2925 298 293 128 0 chr2 48886399 48886532 -201801322 + MER69A DNA AcHobo 28 177 0 412 236 27 88 chr2 48887254 48887402 -201800452 + MIR3 SINE MIR 33 171 -37 230 200 110 70 chr2 48887553 48887653 -201800201 - L2 LINE L2 -19 3253 3150 420 213 134 31 chr2 48887992 48888119 -201799735 - MIR SINE MIR -90 172 33 353 299 61 14 chr2 48889031 48889178 -201798676 - MIR SINE MIR -70 192 39 320 277 46 28 chr2 48889198 48889343 -201798511 - MIR SINE MIR -15 193 42 2204 78 0 3 chr2 48891364 48891688 -201796166 + AluY SINE Alu 1 323 0 1970 109 20 33 chr2 48891692 48891994 -201795860 + AluSx SINE Alu 1 298 -14 248 227 14 128 chr2 48893671 48893812 -201794042 - MLT1K LTR MaLR -16 572 448 333 261 206 30 chr2 48893902 48894101 -201793753 - MLT1K LTR MaLR -330 258 25 184 308 42 58 chr2 48894101 48894221 -201793633 - MIR3 SINE MIR -90 118 1 2000 130 7 3 chr2 48895633 48895932 -201791922 - AluSx SINE Alu -12 300 1 2142 102 7 0 chr2 48896024 48896318 -201791536 - AluSp SINE Alu -17 296 1 231 292 21 10 chr2 48896326 48896422 -201791432 - MIR SINE MIR -46 216 120 657 225 120 35 chr2 48896431 48896730 -201791124 - L1ME4a LINE L1 -118 6003 5660 828 131 31 15 chr2 48896730 48896860 -201790994 - FLAM_C SINE Alu 0 133 2 657 225 120 35 chr2 48896860 48896960 -201790894 - L1ME4a LINE L1 -461 5660 5570 2343 82 0 0 chr2 48897000 48897292 -201790562 + AluSx SINE Alu 1 292 -20 3246 147 3 60 chr2 48897295 48897893 -201789961 - L1MB2 LINE L1 -14 6157 5594 315 271 21 0 chr2 48898815 48898911 -201788943 - L1ME2 LINE L1 -10 6154 6057 245 191 0 0 chr2 48898913 48898955 -201788899 - MER3 DNA MER1_type -160 49 8 309 212 95 85 chr2 48898956 48899005 -201788849 - L1ME2 LINE L1 -153 6011 5964 890 122 15 0 chr2 48899005 48899136 -201788718 - FLAM_C SINE Alu 0 133 1 309 212 95 85 chr2 48899136 48899275 -201788579 - L1ME2 LINE L1 -200 5964 5821 2056 108 6 13 chr2 48899291 48899605 -201788249 + AluSq SINE Alu 1 312 -1 1617 154 0 69 chr2 48899614 48899932 -201787922 + AluJo SINE Alu 6 301 -11 311 254 22 39 chr2 48900293 48900371 -201787483 + (TA)n Simple_repeat Simple_repeat 2 80 -99 2082 122 0 10 chr2 48900371 48900674 -201787180 + AluSx SINE Alu 1 300 -12 1889 150 3 7 chr2 48900677 48900977 -201786877 + AluSx SINE Alu 1 299 -13 311 254 22 39 chr2 48900977 48901075 -201786779 + (TA)n Simple_repeat Simple_repeat 82 179 0 638 332 48 20 chr2 48901075 48901325 -201786529 - MIR SINE MIR -4 258 2 921 89 0 44 chr2 48901627 48901762 -201786092 + FLAM_C SINE Alu 1 129 -4 208 239 204 18 chr2 48902559 48902672 -201785182 - MIR SINE MIR -119 143 10 473 153 0 41 chr2 48904419 48904517 -201783337 - L1MB2 LINE L1 -2 6169 6076 345 307 205 16 chr2 48904543 48904670 -201783184 - MLT1K LTR MaLR -244 344 194 250 311 126 13 chr2 48904842 48904993 -201782861 - L2 LINE L2 -24 3289 3122 708 286 59 5 chr2 48905390 48905593 -201782261 - LTR36-int LTR ERV1 -2723 1562 1349 787 297 27 23 chr2 48905827 48906086 -201781768 - LTR36-int LTR ERV1 -1412 374 115 3275 136 36 47 chr2 48906151 48906769 -201781085 - LTR36 LTR ERV1 0 611 1 277 208 47 66 chr2 48907228 48907334 -201780520 - MER91B DNA MER1_type -8 182 79 209 95 0 24 chr2 48907744 48907786 -201780068 + (TTTTTA)n Simple_repeat Simple_repeat 6 46 0 2017 113 26 10 chr2 48907789 48908091 -201779763 - AluSq SINE Alu -6 307 1 653 330 19 5 chr2 48908191 48908406 -201779448 - MIR SINE MIR -8 254 37 1108 167 22 50 chr2 48908676 48908898 -201778956 - MER20 DNA MER1_type -3 216 1 294 135 58 0 chr2 48909653 48909705 -201778149 + L2 LINE L2 3217 3271 -1 734 177 0 0 chr2 48909819 48909932 -201777922 - FLAM_C SINE Alu -17 116 4 307 256 189 0 chr2 48909945 48910035 -201777819 + MIR SINE MIR 86 192 -70 479 292 124 0 chr2 48910306 48910484 -201777370 + MIR SINE MIR 12 211 -51 922 158 0 0 chr2 48910507 48910640 -201777214 + FLAM_C SINE Alu 1 133 0 1745 217 69 89 chr2 48912234 48912271 -201775583 - MER21B LTR ERV1 -1 862 826 1766 175 30 0 chr2 48912271 48912574 -201775280 - AluJb SINE Alu 0 312 1 1745 217 69 89 chr2 48912574 48913185 -201774669 - MER21B LTR ERV1 -37 826 227 237 139 0 0 chr2 48913180 48913216 -201774638 + MER58 DNA MER1_type 2383 2418 -2 * 308 324 58 40 chr2 48913217 48913390 -201774464 - L1ME4a LINE L1 -97 6024 5849 1775 173 0 3 chr2 48914153 48914454 -201773400 + AluJo SINE Alu 1 300 -12 552 216 58 28 chr2 48914509 48914708 -201773146 + MIR SINE MIR 1 206 -56 1745 133 17 30 chr2 48914760 48915060 -201772794 + AluJo SINE Alu 17 312 0 554 202 133 46 chr2 48915717 48915890 -201771964 + MER58A DNA MER1_type 37 224 0 330 296 122 41 chr2 48916118 48916290 -201771564 - MIR SINE MIR -75 187 2 236 309 66 52 chr2 48916437 48916573 -201771281 + MIR SINE MIR 81 218 -44 214 224 103 0 chr2 48916806 48916864 -201770990 - MIR SINE MIR -117 145 82 370 194 153 0 chr2 48917623 48917721 -201770133 - MIR SINE MIR -87 175 63 985 191 27 53 chr2 48917935 48918160 -201769694 - MER20 DNA MER1_type 0 219 1 363 23 0 0 chr2 48919872 48919916 -201767938 + (TG)n Simple_repeat Simple_repeat 2 45 0 267 265 29 0 chr2 48920994 48921062 -201766792 - L2 LINE L2 0 3272 3203 378 115 0 0 chr2 48921859 48921920 -201765934 + (TG)n Simple_repeat Simple_repeat 2 62 0 254 250 18 0 chr2 48921927 48921983 -201765871 - MER5A DNA MER1_type -113 76 20 215 290 241 31 chr2 48922653 48922815 -201765039 - MIR SINE MIR -10 252 57 376 229 12 0 chr2 48922892 48922975 -201764879 - MER5A DNA MER1_type 0 189 106 1969 129 0 11 chr2 48922985 48923271 -201764583 - AluSx SINE Alu -22 290 8 272 236 0 93 chr2 48923999 48924139 -201763715 - MER113 DNA MER1_type? -394 127 1 328 309 104 41 chr2 48924600 48924869 -201762985 - L2 LINE L2 -20 3252 2967 697 315 0 20 chr2 48925089 48925343 -201762511 - MER112 DNA MER1_type -10 250 2 263 267 57 48 chr2 48926034 48926139 -201761715 - MER117 DNA MER1_type -41 156 51 352 322 51 7 chr2 48927952 48928094 -201759760 + MIR SINE MIR 2 148 -64 752 264 18 32 chr2 48928128 48928348 -201759506 - L2 LINE L2 0 3313 3097 2096 123 0 0 chr2 48929354 48929681 -201758173 - AluSx SINE Alu 0 312 1 313 341 8 8 chr2 48929799 48929818 -201758036 - MIR SINE MIR -88 174 156 410 225 0 0 chr2 48929818 48929898 -201757956 + MER116 DNA Mariner 1 80 0 313 341 8 8 chr2 48929898 48930001 -201757853 - MIR SINE MIR -105 157 52 617 237 25 0 chr2 48931419 48931875 -201755979 + (TCCA)n Simple_repeat Simple_repeat 1 467 0 739 270 92 45 chr2 48933050 48933267 -201754587 + MIR SINE MIR 1 211 -51 1167 204 18 9 chr2 48933267 48933487 -201754367 - MER58A DNA MER1_type 0 224 3 739 270 92 45 chr2 48933487 48933532 -201754322 + MIR SINE MIR 211 252 -10 1972 128 0 0 chr2 48933784 48934096 -201753758 - AluSx SINE Alu 0 312 1 248 106 149 0 chr2 48934220 48934267 -201753587 - MIR SINE MIR -60 148 95 236 271 0 0 chr2 48935390 48935449 -201752405 - L3 LINE CR1 -251 1326 1268 392 292 0 0 chr2 48936098 48936187 -201751667 + MIR SINE MIR 64 152 -110 619 247 30 74 chr2 48938534 48938765 -201749089 + MIR SINE MIR 2 222 -40 285 295 16 54 chr2 48939396 48939525 -201748329 + MIR SINE MIR 18 141 -67 187 227 227 0 chr2 48939803 48939869 -201747985 + L3 LINE CR1 100 180 -1397 217 333 0 0 chr2 48940728 48940782 -201747072 + L2 LINE L2 3206 3259 -13 348 316 58 22 chr2 48941167 48941306 -201746548 - MER5B DNA MER1_type -34 144 1 239 203 14 87 chr2 48941857 48941926 -201745928 - MIR SINE MIR -90 172 109 183 343 128 0 chr2 48942033 48942135 -201745719 + MIR SINE MIR 136 250 -12 343 310 54 0 chr2 48942743 48942872 -201744982 + MIR SINE MIR 73 208 -54 462 318 83 10 chr2 48945049 48945241 -201742613 - MIR SINE MIR -32 230 25 188 138 77 92 chr2 48945707 48945772 -201742082 + MIR SINE MIR 23 86 -122 210 285 229 15 chr2 48945809 48945955 -201741899 - MIR SINE MIR -56 206 34 2193 112 0 3 chr2 48949184 48949487 -201738367 + AluSx SINE Alu 1 302 -10 322 98 0 0 chr2 48951129 48951180 -201736674 + MLT1D LTR MaLR 407 457 -48 216 0 0 0 chr2 48951180 48951204 -201736650 + (A)n Simple_repeat Simple_repeat 1 24 0 198 274 68 0 chr2 48951907 48951980 -201735874 + MIR SINE MIR 67 144 -64 1354 169 32 20 chr2 48954931 48955180 -201732674 + AluJo SINE Alu 37 288 -24 339 313 43 0 chr2 48955801 48955916 -201731938 - MIR SINE MIR -56 152 33 548 258 38 13 chr2 48955953 48956112 -201731742 - MIR SINE MIR 0 262 100 441 292 134 23 chr2 48956160 48956289 -201731565 - MIR SINE MIR -10 252 139 2280 92 0 25 chr2 48956289 48956606 -201731248 + AluSx SINE Alu 1 309 -3 441 292 134 23 chr2 48956606 48956692 -201731162 - MIR SINE MIR -123 139 13 306 327 210 10 chr2 48957326 48957531 -201730323 - MIR SINE MIR 0 262 17 204 273 0 0 chr2 48959597 48959641 -201728213 - L2 LINE L2 -23 3249 3206 2199 94 3 3 chr2 48959792 48960089 -201727765 + AluSp SINE Alu 2 298 -15 940 242 123 57 chr2 48960151 48960540 -201727314 - MER34C LTR ERV1 -1 584 147 1881 140 7 13 chr2 48960540 48960840 -201727014 + AluJo SINE Alu 1 298 -14 940 242 123 57 chr2 48960840 48960995 -201726859 - MER34C LTR ERV1 -438 147 4 258 105 0 0 chr2 48960996 48961034 -201726820 + (TG)n Simple_repeat Simple_repeat 2 39 0 384 282 15 34 chr2 48965040 48965207 -201722647 - MIR SINE MIR -75 187 27 197 349 151 33 chr2 48966399 48966611 -201721243 + L2 LINE L2 2952 3188 -84 518 295 52 16 chr2 48966720 48966913 -201720941 - MIR SINE MIR -25 237 38 1802 186 0 0 chr2 48966913 48967225 -201720629 - AluJo SINE Alu 0 312 1 227 323 43 19 chr2 48969611 48969772 -201718082 - L1ME LINE L1 -224 5897 5733 387 56 0 0 chr2 48971853 48971907 -201715947 + (TTGG)n Simple_repeat Simple_repeat 2 55 0 1933 125 3 14 chr2 48971907 48972196 -201715658 - AluSx SINE Alu -26 286 1 741 238 184 47 chr2 48972506 48972873 -201714981 - MLT1J LTR MaLR -18 493 65 1971 140 0 10 chr2 48972873 48973173 -201714681 + AluJb SINE Alu 1 297 -15 741 238 184 47 chr2 48973173 48973208 -201714646 - MLT1J LTR MaLR -446 65 36 236 239 18 83 chr2 48976043 48976152 -201711702 + L2 LINE L2 2953 3054 -218 230 325 18 68 chr2 48977255 48977332 -201710522 + MIR SINE MIR 43 109 -153 2148 102 0 7 chr2 48977332 48977627 -201710227 - AluSg1 SINE Alu -3 306 14 230 325 18 68 chr2 48977627 48977712 -201710142 + MIR SINE MIR 109 197 -65 435 295 23 0 chr2 48978064 48978193 -201709661 + MIR SINE MIR 29 160 -102 1628 120 0 4 chr2 48978199 48978424 -201709430 + AluJb SINE Alu 6 229 -83 1821 137 58 0 chr2 48978424 48978701 -201709153 + AluSx SINE Alu 1 294 -18 557 138 11 0 chr2 48978720 48978814 -201709040 + AluJb SINE Alu 217 311 -1 271 322 0 70 chr2 48978814 48978929 -201708925 + MIR SINE MIR 156 262 0 270 313 45 37 chr2 48979884 48980018 -201707836 + MIR3 SINE MIR 3 137 -71 247 332 42 24 chr2 48980392 48980593 -201707261 + L3 LINE CR1 1310 1570 -7 363 318 47 24 chr2 48981451 48981621 -201706233 + MIR SINE MIR 33 206 -56 354 240 23 47 chr2 48981646 48981775 -201706079 - MER117 DNA MER1_type 0 197 72 2807 160 29 68 chr2 48983156 48983329 -201704525 - MER34B LTR ERV1 0 565 387 2485 54 0 0 chr2 48983329 48983627 -201704227 + AluY SINE Alu 1 298 -13 2807 160 29 68 chr2 48983627 48984041 -201703813 - MER34B LTR ERV1 -178 387 1 387 73 0 0 chr2 48984982 48985037 -201702817 - MSTD LTR MaLR 0 457 403 919 137 0 0 chr2 48985049 48985180 -201702674 - FLAM_C SINE Alu -12 131 1 24 0 0 0 chr2 48985180 48985204 -201702650 + AT_rich Low_complexity Low_complexity 1 24 0 1525 164 96 15 chr2 48985204 48985528 -201702326 - MSTD LTR MaLR -46 350 1 181 323 0 81 chr2 48985529 48985628 -201702226 + MIR SINE MIR 116 206 -56 408 313 96 0 chr2 48985927 48986093 -201701761 + MIR SINE MIR 16 197 -65 189 0 0 0 chr2 48987187 48987208 -201700646 + (A)n Simple_repeat Simple_repeat 1 21 0 550 265 28 16 chr2 48989831 48990007 -201697847 - MIR SINE MIR -68 140 15 554 252 62 0 chr2 48991564 48991747 -201696107 - MIR SINE MIR -12 250 58 23 54 0 0 chr2 48993605 48993642 -201694212 + AT_rich Low_complexity Low_complexity 1 37 0 275 247 67 11 chr2 48994447 48994536 -201693318 - Charlie7 DNA MER1_type -2518 94 1 690 240 139 19 chr2 48995737 48995945 -201691909 + MIR SINE MIR 29 261 -1 769 282 95 24 chr2 48997351 48997688 -201690166 - L1MC4 LINE L1 -133 7909 7549 289 103 0 81 chr2 48998700 48998787 -201689067 + (TTCC)n Simple_repeat Simple_repeat 2 81 0 2000 121 19 3 chr2 48998799 48999106 -201688748 - AluSx SINE Alu 0 312 1 2258 180 70 35 chr2 49000284 49000406 -201687448 + MLT1D LTR MaLR 1 117 -388 2084 94 0 7 chr2 49000406 49000722 -201687132 + AluSx SINE Alu 1 314 0 2258 180 70 35 chr2 49000722 49001086 -201686768 + MLT1D LTR MaLR 117 505 0 216 292 0 34 chr2 49001807 49001896 -201685958 + C-rich Low_complexity Low_complexity 4 89 0 312 27 0 0 chr2 49003078 49003115 -201684739 + (CA)n Simple_repeat Simple_repeat 2 38 0 228 35 0 0 chr2 49003114 49003143 -201684711 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 210 37 0 0 chr2 49003309 49003336 -201684518 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 336 24 0 0 chr2 49003335 49003376 -201684478 + (GA)n Simple_repeat Simple_repeat 2 42 0 243 185 74 0 chr2 49004759 49004813 -201683041 + L2 LINE L2 3205 3262 -10 312 173 125 87 chr2 49005102 49005206 -201682648 + MER94 DNA DNA 5 112 -22 23 0 0 0 chr2 49006037 49006060 -201681794 + AT_rich Low_complexity Low_complexity 1 23 0 1980 99 0 24 chr2 49006060 49006353 -201681501 - AluSc SINE Alu -23 286 1 991 163 0 11 chr2 49006366 49006544 -201681310 - AluSg/x SINE Alu 0 310 135 308 292 156 19 chr2 49006704 49006858 -201680996 + MIR SINE MIR 8 182 -80 2316 190 32 11 chr2 49008273 49008382 -201679472 - L1M4 LINE L1 -1083 5063 4958 2094 142 0 0 chr2 49008382 49008693 -201679161 - AluSx SINE Alu -1 311 1 2316 190 32 11 chr2 49008693 49009140 -201678714 - L1M4 LINE L1 -1188 4958 4495 2025 102 10 13 chr2 49009140 49009453 -201678401 - AluSq SINE Alu -1 312 1 548 97 0 0 chr2 49009555 49009627 -201678227 - Alu SINE Alu -237 73 2 2092 159 62 51 chr2 49011679 49012133 -201675721 + MLT1C LTR MaLR 9 467 0 180 231 0 0 chr2 49012172 49012211 -201675643 - L2 LINE L2 -38 3234 3196 1311 235 112 20 chr2 49012218 49012665 -201675189 + MLT1J LTR MaLR 20 507 -4 326 269 74 47 chr2 49014015 49014164 -201673690 + L1ME4a LINE L1 5285 5437 -922 435 143 20 20 chr2 49014237 49014335 -201673519 + GA-rich Low_complexity Low_complexity 4 101 0 357 237 37 37 chr2 49014713 49014848 -201673006 + L1MC5 LINE L1 7751 7885 -76 571 286 62 21 chr2 49014888 49015080 -201672774 + L1ME4a LINE L1 5592 5793 -328 244 272 41 65 chr2 49015159 49015328 -201672526 + L1ME4a LINE L1 5956 6120 -1 1738 154 28 0 chr2 49015380 49015666 -201672188 + AluJb SINE Alu 1 294 -18 495 110 0 73 chr2 49015666 49015802 -201672052 + (GGGGA)n Simple_repeat Simple_repeat 1 126 0 422 98 0 0 chr2 49016116 49016177 -201671677 - AluSg SINE Alu -8 303 243 5524 213 26 29 chr2 49016179 49017264 -201670590 - L1MDa LINE L1 -2324 4216 3136 2126 99 0 16 chr2 49017264 49017429 -201670425 - AluSx SINE Alu -14 298 139 2106 111 0 0 chr2 49017429 49017718 -201670136 - AluSc SINE Alu -20 289 1 2126 99 0 16 chr2 49017718 49017855 -201669999 - AluSx SINE Alu -173 139 1 5524 213 26 29 chr2 49017855 49018282 -201669572 - L1MDa LINE L1 -3404 3136 2709 398 146 73 73 chr2 49018573 49018669 -201669185 - L1MDa LINE L1 -3898 2642 2547 1670 111 0 0 chr2 49018710 49018944 -201668910 - AluSg SINE Alu -76 234 1 3253 168 90 7 chr2 49018998 49019612 -201668242 - L1MDa LINE L1 -5742 798 134 1906 130 27 0 chr2 49019765 49020057 -201667797 - AluSx SINE Alu -12 300 1 204 125 0 0 chr2 49020196 49020228 -201667626 + (A)n Simple_repeat Simple_repeat 1 32 0 2062 138 0 0 chr2 49021837 49022141 -201665713 - AluSx SINE Alu -8 304 1 236 265 0 29 chr2 49022143 49022245 -201665609 - HAL1 LINE L1 -423 2084 1986 915 280 91 9 chr2 49022246 49022596 -201665258 - HAL1 LINE L1 -565 1942 1564 249 244 61 76 chr2 49022595 49022726 -201665128 - HAL1 LINE L1 -1510 997 869 * 2017 123 0 3 chr2 49022726 49023027 -201664827 - AluSx SINE Alu -12 300 1 487 182 111 0 chr2 49023237 49023336 -201664518 + MSTC LTR MaLR 1 110 -318 2148 106 3 0 chr2 49024280 49024582 -201663272 - AluSp SINE Alu -10 303 1 187 318 34 57 chr2 49024790 49024878 -201662976 + L2 LINE L2 3186 3271 -1 709 185 0 15 chr2 49025004 49025134 -201662720 - FLAM_C SINE Alu -5 128 1 3739 79 2 15 chr2 49025202 49025681 -201662173 + MER1A DNA MER1_type 57 529 0 482 261 122 22 chr2 49025737 49025917 -201661937 + MIR SINE MIR 60 257 -5 487 154 44 0 chr2 49026420 49026511 -201661343 + L1M4 LINE L1 1 95 -6447 2292 186 9 38 chr2 49026760 49027122 -201660732 - LTR39 LTR ERV1 -7 776 428 2066 118 7 0 chr2 49027122 49027428 -201660426 + AluSx SINE Alu 1 308 -4 2292 186 9 38 chr2 49027428 49027511 -201660343 - LTR39 LTR ERV1 -355 428 344 1082 79 0 0 chr2 49027514 49027653 -201660201 + AluY SINE Alu 158 296 -15 1089 178 158 49 chr2 49027654 49027958 -201659896 - LTR39 LTR ERV1 -446 337 1 1388 246 72 54 chr2 49027981 49028651 -201659203 + HAL1 LINE L1 100 781 -1726 1127 206 33 13 chr2 49028651 49028917 -201658937 - MLT1D LTR MaLR 0 505 206 378 0 0 0 chr2 49028919 49028961 -201658893 + (TG)n Simple_repeat Simple_repeat 2 43 0 695 168 84 14 chr2 49028974 49029117 -201658737 - MLT1D LTR MaLR -352 153 1 299 230 14 27 chr2 49029117 49029191 -201658663 + HAL1 LINE L1 777 849 -1658 564 311 97 39 chr2 49029211 49029594 -201658260 - L1 LINE L1 -788 5358 4954 2236 98 3 0 chr2 49029889 49030196 -201657658 - AluSx SINE Alu -4 308 1 24 0 0 0 chr2 49030225 49030249 -201657605 + AT_rich Low_complexity Low_complexity 1 24 0 742 237 155 32 chr2 49030421 49030699 -201657155 - L2 LINE L2 -8 3305 2994 6998 118 9 34 chr2 49031066 49031227 -201656627 - L1MA3 LINE L1 -5 6300 6137 1900 106 20 27 chr2 49031227 49031545 -201656309 - AluSx SINE Alu 0 312 1 6998 118 9 34 chr2 49031545 49032399 -201655455 - L1MA3 LINE L1 -168 6137 5264 1752 168 3 3 chr2 49032399 49032690 -201655164 + AluJb SINE Alu 1 291 -21 6998 118 9 34 chr2 49032690 49032985 -201654869 - L1MA3 LINE L1 -1041 5264 4963 973 97 0 22 chr2 49032985 49033119 -201654735 - FLAM_C SINE Alu -2 131 1 6998 118 9 34 chr2 49033119 49033512 -201654342 - L1MA3 LINE L1 -1342 4963 4623 18029 146 41 12 chr2 49033523 49033575 -201654279 - L1M1 LINE L1 -4498 3067 3018 1795 179 0 3 chr2 49033575 49033887 -201653967 - AluJo SINE Alu -1 311 1 18029 146 41 12 chr2 49033887 49034517 -201653337 - L1M1 LINE L1 -4547 3018 2408 1986 147 3 0 chr2 49034517 49034824 -201653030 - AluSx SINE Alu 0 312 5 18029 146 41 12 chr2 49034824 49037133 -201650721 - L1M1 LINE L1 -5157 2408 20 2203 100 3 0 chr2 49037773 49038073 -201649781 - AluSx SINE Alu -11 301 1 1673 166 20 7 chr2 49038076 49038371 -201649483 - AluJo SINE Alu -13 299 1 1631 203 0 0 chr2 49038384 49038684 -201649170 - AluJb SINE Alu -12 300 1 257 227 102 23 chr2 49038721 49038809 -201649045 - L2 LINE L2 -8 3264 3170 1874 133 0 0 chr2 49039158 49039437 -201648417 + AluSx SINE Alu 19 297 -15 1668 169 7 3 chr2 49040428 49040724 -201647130 - AluJo SINE Alu -15 297 1 23 0 0 0 chr2 49040856 49040879 -201646975 + AT_rich Low_complexity Low_complexity 1 23 0 1107 128 0 28 chr2 49040879 49041059 -201646795 + AluSg/x SINE Alu 123 297 -15 2146 123 0 0 chr2 49041506 49041815 -201646039 - AluSx SINE Alu -3 309 1 216 214 54 18 chr2 49041905 49041961 -201645893 + MIR SINE MIR 59 116 -146 324 266 36 22 chr2 49041983 49042122 -201645732 - L1MC4 LINE L1 0 8042 7902 226 257 14 0 chr2 49042122 49042192 -201645662 + (TA)n Simple_repeat Simple_repeat 2 72 0 1751 138 20 27 chr2 49042241 49042539 -201645315 + AluJo SINE Alu 1 296 -16 241 231 51 8 chr2 49042557 49042674 -201645180 - L1MC4 LINE L1 -232 7810 7689 1200 200 60 0 chr2 49042681 49042931 -201644923 - AluJo SINE Alu -20 292 28 937 219 53 64 chr2 49042978 49043261 -201644593 - L1MC4 LINE L1 -409 7633 7354 583 252 68 33 chr2 49043488 49043699 -201644155 + MIR SINE MIR 31 250 -12 263 263 20 30 chr2 49043769 49043868 -201643986 - MIR SINE MIR -138 124 27 2074 133 0 3 chr2 49043992 49044286 -201643568 - AluSx SINE Alu -19 293 1 274 314 9 0 chr2 49045655 49045760 -201642094 - MIR SINE MIR -5 257 152 683 262 79 70 chr2 49046078 49046536 -201641318 - L2 LINE L2 -10 3303 2842 418 107 0 0 chr2 49046597 49046653 -201641201 + Alu SINE Alu 2 57 -252 792 157 0 15 chr2 49047855 49047989 -201639865 + FLAM_C SINE Alu 1 132 -1 1150 153 77 158 chr2 49049101 49049505 -201638349 + MLT1A2 LTR MaLR 1 371 -3 915 146 0 0 chr2 49049574 49049711 -201638143 + FLAM_C SINE Alu 1 137 -6 288 229 48 0 chr2 49050064 49050147 -201637707 - MIR SINE MIR -71 191 105 37627 93 27 34 chr2 49051287 49057724 -201630130 + HERV17 LTR ERV1 28 4944 0 536 189 74 16 chr2 49057725 49057939 -201629915 + HERV17 LTR ERV1 698 1022 -5874 * 7749 99 31 35 chr2 49057937 49059988 -201627866 + pTR5 LTR ERV1 504 8399 0 361 214 31 20 chr2 49059988 49060086 -201627768 + LTR30 LTR ERV1 544 642 -80 1568 110 4 4 chr2 49060087 49060314 -201627540 + pTR5 LTR ERV1 170 396 -2042 337 278 83 7 chr2 49060441 49060585 -201627269 + MLT1K LTR MaLR 93 247 -341 320 231 31 0 chr2 49060758 49060823 -201627031 + MLT1K LTR MaLR 522 588 0 2217 116 7 0 chr2 49061002 49061304 -201626550 + AluSx SINE Alu 1 304 -8 401 247 106 106 chr2 49062043 49062070 -201625784 - L1ME4a LINE L1 -4 6117 6091 2074 126 3 0 chr2 49062070 49062363 -201625491 + AluSx SINE Alu 1 294 -18 401 247 106 106 chr2 49062363 49062930 -201624924 - L1ME4a LINE L1 -29 6092 5523 2078 133 3 13 chr2 49063912 49064227 -201623627 - AluSx SINE Alu 0 312 1 1282 152 62 0 chr2 49064561 49064771 -201623083 + AluJb SINE Alu 84 306 -6 285 212 212 18 chr2 49064869 49064982 -201622872 - L2 LINE L2 0 3313 3179 2421 66 23 0 chr2 49065510 49065812 -201622042 + AluY SINE Alu 1 309 -2 807 182 0 0 chr2 49065845 49065977 -201621877 + AluJo/FLAM SINE Alu 1 132 -170 2091 147 0 6 chr2 49065979 49066293 -201621561 + AluSx SINE Alu 1 312 0 637 271 34 60 chr2 49066422 49066462 -201621392 - L1MC/D LINE L1 -535 5631 5592 2167 76 69 7 chr2 49066462 49066751 -201621103 - AluSq SINE Alu -6 307 1 637 271 34 60 chr2 49066751 49067114 -201620740 - L1MC/D LINE L1 -574 5592 5329 2449 67 0 10 chr2 49067114 49067413 -201620441 - AluY SINE Alu -15 296 1 637 271 34 60 chr2 49067413 49067464 -201620390 - L1MC/D LINE L1 -837 5329 5278 294 263 12 0 chr2 49067941 49068021 -201619833 + L1ME LINE L1 5745 5825 -296 748 194 0 22 chr2 49068024 49068158 -201619696 + FLAM_C SINE Alu 1 131 -2 2411 80 0 7 chr2 49068353 49068655 -201619199 - AluSc SINE Alu -9 300 1 276 359 60 6 chr2 49069011 49069178 -201618676 + L1MEd LINE L1 445 620 -5499 812 279 121 47 chr2 49069309 49069757 -201618097 - L2 LINE L2 0 3313 2833 776 160 94 72 chr2 49069853 49070034 -201617820 + MER20 DNA MER1_type 33 217 -2 619 245 62 58 chr2 49070037 49070073 -201617781 - L2 LINE L2 -990 2324 2290 922 99 0 23 chr2 49070073 49070204 -201617650 + FLAM_C SINE Alu 5 132 -1 619 245 62 58 chr2 49070204 49070424 -201617430 - L2 LINE L2 -1024 2290 2067 1322 219 253 33 chr2 49070425 49070480 -201617374 - L2 LINE L2 -1935 1379 1337 1555 163 49 17 chr2 49070480 49070768 -201617086 + AluJo SINE Alu 1 297 -15 1322 219 253 33 chr2 49070768 49071387 -201616467 - L2 LINE L2 -1977 1337 556 1981 124 34 17 chr2 49071581 49071872 -201615982 - AluSx SINE Alu -16 296 1 972 89 0 57 chr2 49071913 49072070 -201615784 + L1PA16 LINE L1 6016 6163 -3 194 0 0 37 chr2 49072145 49072172 -201615682 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2928 41 0 0 chr2 49072172 49072515 -201615339 - L1PA5 LINE L1 -16 6138 5796 304 286 0 0 chr2 49073657 49073734 -201614120 + MIR SINE MIR 75 151 -111 1041 216 117 53 chr2 49074125 49074408 -201613446 - AluJb SINE Alu 0 302 2 2312 83 17 0 chr2 49075369 49075534 -201612320 - AluY SINE Alu -16 295 121 197 33 33 0 chr2 49075534 49075564 -201612290 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 2312 83 17 0 chr2 49075564 49075688 -201612166 - AluY SINE Alu -190 121 1 22 0 0 0 chr2 49076689 49076711 -201611143 + AT_rich Low_complexity Low_complexity 1 22 0 358 254 129 45 chr2 49076939 49077095 -201610759 + MIR SINE MIR 20 202 -60 1758 146 0 67 chr2 49077095 49077411 -201610443 + AluSx SINE Alu 2 296 -16 358 254 129 45 chr2 49077411 49077478 -201610376 + MIR SINE MIR 202 262 0 1067 106 33 0 chr2 49078208 49078359 -201609495 + AluSg/x SINE Alu 135 290 -20 22 0 0 0 chr2 49078377 49078399 -201609455 + AT_rich Low_complexity Low_complexity 1 22 0 219 253 12 36 chr2 49078530 49078613 -201609241 + A-rich Low_complexity Low_complexity 4 84 0 488 284 71 35 chr2 49079551 49079748 -201608106 - MIR SINE MIR -44 218 15 434 298 113 0 chr2 49079753 49080001 -201607853 + L2 LINE L2 1752 2027 -1287 276 250 147 37 chr2 49080030 49080166 -201607688 + MIR SINE MIR 112 262 0 546 111 62 0 chr2 49080207 49080288 -201607566 - AluSg/x SINE Alu -14 295 210 1152 86 26 0 chr2 49080288 49080440 -201607414 - AluSq SINE Alu -157 156 1 307 248 224 16 chr2 49080814 49080939 -201606915 - MER5A DNA MER1_type 0 189 39 2165 116 10 3 chr2 49081716 49082019 -201605835 + AluSg SINE Alu 1 305 -5 670 119 50 0 chr2 49082460 49082561 -201605293 + FLAM_C SINE Alu 26 131 -12 180 0 0 0 chr2 49084474 49084494 -201603360 + (A)n Simple_repeat Simple_repeat 1 20 0 239 291 236 20 chr2 49085051 49085199 -201602655 - MER5A DNA MER1_type 0 189 10 198 0 0 0 chr2 49085791 49085813 -201602041 + (A)n Simple_repeat Simple_repeat 1 22 0 301 172 0 47 chr2 49086497 49086561 -201601293 + LTR37B LTR ERV1 1 61 -407 2978 128 10 85 chr2 49086566 49087181 -201600673 - L1MB3 LINE L1 -2 6181 5613 717 171 127 6 chr2 49087181 49087339 -201600515 + MSTB2 LTR MaLR 2 178 -279 806 174 7 20 chr2 49087641 49087790 -201600064 + MLT1A1 LTR MaLR 1 147 -218 1493 69 0 0 chr2 49087802 49087977 -201599877 + AluSq SINE Alu 5 179 -134 255 31 0 0 chr2 49088710 49088742 -201599112 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2432 148 18 36 chr2 49088772 49088823 -201599031 - L1MB7 LINE L1 -19 6165 6115 2302 94 3 3 chr2 49088823 49089122 -201598732 + AluSq SINE Alu 1 299 -14 2432 148 18 36 chr2 49089122 49089515 -201598339 - L1MB7 LINE L1 -69 6115 5729 1930 159 7 0 chr2 49089567 49089856 -201597998 + AluJo SINE Alu 1 291 -21 225 83 0 0 chr2 49090256 49090292 -201597562 + (A)n Simple_repeat Simple_repeat 1 36 0 398 186 12 35 chr2 49090828 49090914 -201596940 + 7SLRNA srpRNA srpRNA 229 312 -8 434 67 0 0 chr2 49091515 49091575 -201596279 - AluSp/q SINE Alu -16 297 238 539 91 0 13 chr2 49091676 49091753 -201596101 - AluS SINE Alu -237 76 1 830 149 0 112 chr2 49091856 49091976 -201595878 + AluSx SINE Alu 1 94 -218 2624 55 0 3 chr2 49091976 49092287 -201595567 + AluY SINE Alu 1 310 -1 830 149 0 112 chr2 49092287 49092354 -201595500 + AluSx SINE Alu 94 167 -145 360 0 0 0 chr2 49092368 49092408 -201595446 + (CA)n Simple_repeat Simple_repeat 2 41 0 1277 132 5 25 chr2 49092437 49092641 -201595213 + AluSg/x SINE Alu 106 305 -5 370 252 36 43 chr2 49093225 49093364 -201594490 + MIR SINE MIR 5 142 -120 294 344 78 0 chr2 49093887 49094015 -201593839 + L2 LINE L2 2497 2634 -680 33 43 0 0 chr2 49095016 49095063 -201592791 + AT_rich Low_complexity Low_complexity 1 47 0 2295 125 0 0 chr2 49095433 49095745 -201592109 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 49095801 49095822 -201592032 + AT_rich Low_complexity Low_complexity 1 21 0 840 153 15 0 chr2 49095822 49095953 -201591901 - FLAM_C SINE Alu 0 133 1 208 250 220 0 chr2 49096113 49096213 -201591641 - L2 LINE L2 -4 3309 3188 1786 112 97 7 chr2 49096478 49096756 -201591098 + AluSp SINE Alu 1 303 -10 2304 90 14 0 chr2 49096805 49097095 -201590759 - AluSx SINE Alu -18 294 1 754 132 53 0 chr2 49097359 49097473 -201590381 - FLAM_C SINE Alu -21 122 3 252 169 195 13 chr2 49099441 49099518 -201588336 - MIR SINE MIR -70 192 102 21 0 0 0 chr2 49100003 49100024 -201587830 + AT_rich Low_complexity Low_complexity 1 21 0 454 248 119 16 chr2 49100284 49100473 -201587381 + MIR SINE MIR 1 208 -54 994 166 18 6 chr2 49102269 49102438 -201585416 - FRAM SINE Alu -13 163 1 207 0 0 0 chr2 49103096 49103119 -201584735 + (T)n Simple_repeat Simple_repeat 1 23 0 205 151 12 70 chr2 49103830 49103916 -201583938 + (CCCG)n Simple_repeat Simple_repeat 2 82 0 221 298 137 50 chr2 49105454 49105615 -201582239 + MIR SINE MIR 87 261 -1 225 383 26 35 chr2 49105832 49106059 -201581795 - L2 LINE L2 -188 3084 2860 1537 185 13 40 chr2 49107637 49107795 -201580059 - AluJo SINE Alu -17 295 147 2331 62 0 4 chr2 49107795 49108068 -201579786 - AluY SINE Alu -6 305 34 1537 185 13 40 chr2 49108068 49108212 -201579642 - AluJo SINE Alu -165 147 1 840 134 140 6 chr2 49108245 49108416 -201579438 + MER105 DNA DNA 6 199 -5 506 211 29 10 chr2 49108645 49108749 -201579105 + MER81 DNA DNA 2 107 -7 711 242 112 23 chr2 49109023 49109238 -201578616 - MER115 DNA AcHobo -459 234 1 345 332 101 65 chr2 49109351 49109749 -201578105 + L2 LINE L2 2857 3268 -4 21 36 0 0 chr2 49109843 49109871 -201577983 + AT_rich Low_complexity Low_complexity 1 28 0 2263 124 0 0 chr2 49109949 49110255 -201577599 + AluSg1 SINE Alu 2 307 -2 894 113 0 0 chr2 49111363 49111478 -201576376 - AluSq/x SINE Alu -197 115 1 2194 128 0 7 chr2 49111487 49111793 -201576061 - AluSx SINE Alu -8 304 1 397 229 64 133 chr2 49111845 49112162 -201575692 - L1MC4 LINE L1 -2 8040 7654 2093 138 3 0 chr2 49112162 49112458 -201575396 + AluJb SINE Alu 1 297 -15 397 229 64 133 chr2 49112458 49112586 -201575268 - L1MC4 LINE L1 -388 7654 7519 874 173 13 13 chr2 49112592 49112763 -201575091 - FRAM SINE Alu 0 167 1 2306 91 3 3 chr2 49112769 49113066 -201574788 - AluY SINE Alu -13 298 2 2050 134 3 0 chr2 49113072 49113356 -201574498 - AluSx SINE Alu -23 289 5 1913 231 29 103 chr2 49113367 49114256 -201573598 - L1MC4 LINE L1 -418 7624 6802 198 71 0 0 chr2 49114671 49114699 -201573155 + (CTG)n Simple_repeat Simple_repeat 2 29 0 284 128 0 0 chr2 49114947 49114986 -201572868 + 5S rRNA rRNA 4 42 -79 188 250 0 36 chr2 49115290 49115346 -201572508 + MIR SINE MIR 71 124 -84 192 125 0 0 chr2 49115519 49115551 -201572303 + (TC)n Simple_repeat Simple_repeat 1 32 0 475 292 84 0 chr2 49115600 49115754 -201572100 - MIR3 SINE MIR -9 199 33 1269 188 0 35 chr2 49115885 49116140 -201571714 - AluJb SINE Alu 0 312 67 519 130 52 0 chr2 49116233 49116310 -201571544 - AluJb SINE Alu -229 83 3 482 303 20 25 chr2 49116344 49116542 -201571312 - MIR SINE MIR 0 262 66 192 284 45 34 chr2 49116614 49116702 -201571152 - L2 LINE L2 0 3272 3184 597 133 0 0 chr2 49116703 49116786 -201571068 + AluS SINE Alu 2 84 -229 2446 88 0 3 chr2 49116856 49117164 -201570690 + AluSx SINE Alu 1 307 -5 180 273 18 18 chr2 49118178 49118233 -201569621 + L3 LINE CR1 1517 1571 -6 579 279 46 10 chr2 49120250 49120447 -201567407 + MIR SINE MIR 37 240 -22 210 171 0 0 chr2 49120701 49120742 -201567112 + CT-rich Low_complexity Low_complexity 2 42 0 594 254 53 35 chr2 49121078 49121306 -201566548 - MIR SINE MIR -14 248 17 1769 219 43 166 chr2 49122668 49123390 -201564464 - MER45C DNA AcHobo -320 633 1 30 27 0 0 chr2 49123588 49123625 -201564229 + AT_rich Low_complexity Low_complexity 1 37 0 206 214 0 0 chr2 49124480 49124522 -201563332 + L2 LINE L2 3264 3305 -8 201 333 103 43 chr2 49125169 49125286 -201562568 + MIR3 SINE MIR 71 194 -14 204 206 0 0 chr2 49125368 49125402 -201562452 + polypyrimidine Low_complexity Low_complexity 2 35 0 543 289 99 13 chr2 49125895 49126127 -201561727 + MIR SINE MIR 11 262 0 2684 116 19 9 chr2 49126273 49126697 -201561157 + L1MA2 LINE L1 5877 6304 0 765 191 99 0 chr2 49127975 49128137 -201559717 + MER5B DNA MER1_type 1 178 0 2250 124 0 0 chr2 49128226 49128532 -201559322 + AluSx SINE Alu 1 306 -6 205 302 66 36 chr2 49128852 49128995 -201558859 - MIR SINE MIR -59 149 19 270 200 0 18 chr2 49129742 49129797 -201558057 - MLT1K LTR MaLR -347 241 188 3022 180 72 16 chr2 49129905 49130660 -201557194 + L1PA3 LINE L1 5443 6226 0 2161 118 0 3 chr2 49130696 49130985 -201556869 + AluSx SINE Alu 1 288 -24 1582 166 89 3 chr2 49130998 49131343 -201556511 + L1MB5 LINE L1 5812 6180 0 2081 146 12 6 chr2 49131428 49131770 -201556084 - MER2 DNA MER2_type 0 344 1 352 314 184 29 chr2 49131781 49131960 -201555894 - L2 LINE L2 0 3272 3122 231 36 0 0 chr2 49131960 49131988 -201555866 + (TTA)n Simple_repeat Simple_repeat 1 28 0 352 314 184 29 chr2 49131988 49132123 -201555731 - L2 LINE L2 -150 3122 2909 1893 174 0 13 chr2 49132375 49132674 -201555180 + AluJo SINE Alu 1 295 -17 2277 117 21 29 chr2 49132820 49133196 -201554658 + THE1C LTR MaLR 1 373 -2 216 320 93 0 chr2 49134595 49134692 -201553162 - MIR3 SINE MIR -91 117 12 1492 249 28 23 chr2 49135158 49135289 -201552565 + L2 LINE L2 2485 2614 -700 1070 156 0 12 chr2 49135289 49135456 -201552398 - FRAM SINE Alu -1 165 1 1492 249 28 23 chr2 49135456 49135794 -201552060 + L2 LINE L2 2614 2956 -358 586 185 0 9 chr2 49135786 49135894 -201551960 + L2 LINE L2 3182 3288 -25 * 1572 202 35 3 chr2 49135895 49136182 -201551672 + AluJo SINE Alu 1 296 -16 189 107 0 0 chr2 49136200 49136228 -201551626 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 218 289 0 0 chr2 49137373 49137425 -201550429 - L2 LINE L2 -11 3261 3210 296 237 66 0 chr2 49137459 49137535 -201550319 + MIR SINE MIR 182 262 0 372 324 135 7 chr2 49137547 49137695 -201550159 - MIR SINE MIR -76 186 20 2285 111 0 0 chr2 49137999 49138305 -201549549 - AluSx SINE Alu -6 306 1 713 221 9 136 chr2 49139826 49139989 -201547865 + L1ME1 LINE L1 4847 4952 -1194 1524 127 4 9 chr2 49139989 49140218 -201547636 + AluSx SINE Alu 1 228 -84 713 221 9 136 chr2 49140218 49140370 -201547484 + L1ME1 LINE L1 4952 5122 -1024 389 167 0 0 chr2 49140364 49140424 -201547430 + L1MB3 LINE L1 6083 6142 -41 * 936 148 0 7 chr2 49140425 49140567 -201547287 + AluJb SINE Alu 1 141 -171 365 111 0 16 chr2 49140569 49140632 -201547222 + AluSp/q SINE Alu 241 302 -1 339 105 0 0 chr2 49140639 49140696 -201547158 + L1MB3 LINE L1 6127 6183 0 2117 121 0 0 chr2 49140729 49141037 -201546817 + AluSx SINE Alu 5 312 0 3906 187 37 32 chr2 49141092 49141447 -201546407 + L1ME1 LINE L1 5127 5479 -687 1653 158 57 27 chr2 49141447 49141744 -201546110 + AluJb SINE Alu 1 306 -6 3906 187 37 32 chr2 49141744 49142424 -201545430 + L1ME1 LINE L1 5479 6163 -3 436 316 179 0 chr2 49142479 49142697 -201545157 + MIR SINE MIR 2 258 -4 2482 67 0 0 chr2 49143672 49143970 -201543884 + AluSq SINE Alu 1 298 -15 618 260 40 31 chr2 49144016 49144243 -201543611 + LTR33 LTR ERVL 21 249 -272 2157 115 7 3 chr2 49144364 49144659 -201543195 - AluSx SINE Alu -16 296 1 1622 139 60 54 chr2 49144659 49144935 -201542919 + LTR32 LTR ERVL 32 312 -159 2423 59 0 29 chr2 49144935 49145241 -201542613 - AluY SINE Alu -14 297 1 1622 139 60 54 chr2 49145241 49145280 -201542574 + LTR32 LTR ERVL 312 349 -122 255 200 60 0 chr2 49145282 49145332 -201542522 + LTR32 LTR ERVL 316 368 -103 802 182 19 13 chr2 49145332 49145486 -201542368 + LTR32 LTR ERVL 317 471 0 278 152 121 0 chr2 49145486 49145552 -201542302 + LTR33 LTR ERVL 356 429 -92 2366 74 0 3 chr2 49145714 49146013 -201541841 + AluSg SINE Alu 3 300 -10 988 157 30 18 chr2 49146759 49146925 -201540929 + FAM SINE Alu 1 168 -7 728 222 16 32 chr2 49146959 49147144 -201540710 + MIR SINE MIR 80 261 -1 189 195 0 0 chr2 49147818 49147859 -201539995 + CT-rich Low_complexity Low_complexity 2 42 0 360 293 239 17 chr2 49147866 49148105 -201539749 - L2 LINE L2 -17 3296 3005 306 276 96 64 chr2 49148453 49148609 -201539245 + MIR SINE MIR 96 256 -6 764 221 66 6 chr2 49148677 49148892 -201538962 + MIR SINE MIR 15 243 -19 713 232 200 69 chr2 49148914 49149405 -201538449 + MLT1H1 LTR MaLR 1 555 0 226 176 0 29 chr2 49149406 49149474 -201538380 + (CATA)n Simple_repeat Simple_repeat 2 67 0 229 254 16 16 chr2 49149768 49149831 -201538023 - MIR SINE MIR -3 259 197 1610 233 118 18 chr2 49149839 49150351 -201537503 + MLT1G1 LTR MaLR 1 595 0 314 347 34 20 chr2 49150368 49150497 -201537357 + L2 LINE L2 3164 3297 -16 2163 113 0 0 chr2 49150497 49150798 -201537056 + AluSx SINE Alu 1 301 -11 314 347 34 20 chr2 49150798 49150815 -201537039 + L2 LINE L2 3297 3312 -1 404 241 11 11 chr2 49150844 49150949 -201536905 - MIR SINE MIR -42 166 62 471 101 29 0 chr2 49150949 49151018 -201536836 - MSTC LTR MaLR -357 71 1 1748 163 0 3 chr2 49151591 49151880 -201535974 + AluJb SINE Alu 1 288 -24 464 143 176 59 chr2 49152903 49153022 -201534832 - MIR SINE MIR -10 252 120 341 279 103 22 chr2 49153201 49153337 -201534517 + MIR3 SINE MIR 7 153 -55 24 0 0 0 chr2 49155443 49155467 -201532387 + AT_rich Low_complexity Low_complexity 1 24 0 1360 154 38 8 chr2 49158428 49158694 -201529160 + L1MA4 LINE L1 6024 6297 -3 2116 128 0 0 chr2 49158803 49159115 -201528739 + AluSx SINE Alu 1 312 0 327 85 0 0 chr2 49160559 49160606 -201527248 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 206 324 124 49 chr2 49160617 49160802 -201527052 - L2 LINE L2 -38 3234 3036 785 167 0 0 chr2 49160829 49160949 -201526905 + FLAM_C SINE Alu 5 124 -19 1940 140 0 3 chr2 49161468 49161768 -201526086 - AluJo SINE Alu -4 308 10 655 186 26 0 chr2 49162054 49162167 -201525687 + FLAM_A SINE Alu 1 116 -17 758 112 0 0 chr2 49162274 49162372 -201525482 - AluS SINE Alu -213 99 2 1901 142 0 3 chr2 49162375 49162670 -201525184 - AluSx SINE Alu -18 294 1 1359 163 0 9 chr2 49162681 49162908 -201524946 - AluJb SINE Alu 0 312 88 839 152 0 0 chr2 49162913 49163051 -201524803 + L1MB3 LINE L1 6016 6153 -30 312 125 0 5 chr2 49163051 49163112 -201524742 - MLT2B1 LTR ERVL 0 464 424 22 0 0 0 chr2 49163159 49163181 -201524673 + AT_rich Low_complexity Low_complexity 1 22 0 1929 106 4 0 chr2 49163196 49163461 -201524393 + AluSp SINE Alu 1 266 -47 1120 92 23 0 chr2 49163466 49163640 -201524214 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 1255 195 45 112 chr2 49163640 49164014 -201523840 - MLT2B1 LTR ERVL -65 349 1 181 308 196 23 chr2 49164043 49164176 -201523678 - MIR3 SINE MIR -15 193 38 185 313 60 15 chr2 49164590 49164657 -201523197 + L2 LINE L2 3140 3209 -63 1719 152 12 46 chr2 49165339 49165662 -201522192 + AluJb SINE Alu 1 312 0 911 183 148 80 chr2 49165778 49166125 -201521729 + LTR37A LTR ERV1 35 454 -14 262 91 0 0 chr2 49166138 49166171 -201521683 - Alu SINE Alu -13 289 257 965 126 14 0 chr2 49166271 49166443 -201521411 + AluSg/x SINE Alu 138 311 0 1011 155 0 41 chr2 49166443 49166637 -201521217 - L1MB4 LINE L1 -172 6008 5823 1473 133 34 9 chr2 49166641 49166874 -201520980 - AluJb SINE Alu -13 299 61 1085 159 17 29 chr2 49166874 49167119 -201520735 - L1MB4 LINE L1 -541 5630 5387 324 26 0 0 chr2 49167125 49167163 -201520691 - tRNA-Val-GTG tRNA tRNA -38 38 1 2019 174 23 37 chr2 49167163 49167477 -201520377 - L1M3 LINE L1 -737 5443 5126 1826 189 0 0 chr2 49167477 49167790 -201520064 - AluSq SINE Alu 0 313 1 2019 174 23 37 chr2 49167790 49167890 -201519964 - L1M3 LINE L1 -1054 5126 5026 1646 196 0 10 chr2 49167890 49168060 -201519794 - AluJo SINE Alu -9 303 136 2202 118 0 0 chr2 49168060 49168366 -201519488 - AluSx SINE Alu -6 306 1 1646 196 0 10 chr2 49168366 49168501 -201519353 - AluJo SINE Alu -176 136 1 2019 174 23 37 chr2 49168501 49168642 -201519212 - L1M3 LINE L1 -1154 5026 4903 785 266 145 48 chr2 49168663 49168964 -201518890 - MLT1J LTR MaLR -3 508 145 2363 184 104 2 chr2 49168964 49169426 -201518428 + LTR22 LTR ERVK 1 509 0 785 266 145 48 chr2 49169426 49169587 -201518267 - MLT1J LTR MaLR -366 145 1 254 309 0 0 chr2 49169629 49169713 -201518141 + MIR SINE MIR 179 262 0 1602 163 0 31 chr2 49171172 49171301 -201516553 + AluJb SINE Alu 9 140 -169 2170 97 0 10 chr2 49171301 49171609 -201516245 + AluSq SINE Alu 1 305 -8 1602 163 0 31 chr2 49171609 49171789 -201516065 + AluJb SINE Alu 140 309 0 280 333 193 10 chr2 49171943 49172150 -201515704 - MIR SINE MIR -16 246 2 357 311 92 19 chr2 49172388 49172594 -201515260 + MLT1L LTR MaLR 8 228 -387 226 273 219 29 chr2 49172634 49172839 -201515015 + MLT1K LTR MaLR 328 571 -17 552 272 95 109 chr2 49173057 49173395 -201514459 - L2 LINE L2 0 3272 2940 200 364 15 23 chr2 49173406 49173538 -201514316 + L2 LINE L2 2576 2706 -608 793 190 11 6 chr2 49173577 49173756 -201514098 + CT-rich Low_complexity Low_complexity 1 180 0 545 278 224 9 chr2 49173764 49173781 -201514073 + L2 LINE L2 2751 2763 -509 2010 139 0 0 chr2 49173781 49174082 -201513772 - AluSx SINE Alu -11 301 1 545 278 224 9 chr2 49174082 49174487 -201513367 + L2 LINE L2 2763 3263 -9 1949 107 7 33 chr2 49174714 49175013 -201512841 + AluSx SINE Alu 1 291 -21 353 164 0 0 chr2 49175956 49176011 -201511843 - MER45A DNA AcHobo -24 154 100 302 186 271 0 chr2 49176097 49176167 -201511687 - MER45A DNA AcHobo -89 89 1 1963 112 3 20 chr2 49176200 49176496 -201511358 + AluSx SINE Alu 14 304 -8 241 231 62 31 chr2 49176608 49176673 -201511181 - MER39 LTR ERV1 0 707 641 416 147 0 0 chr2 49176776 49176844 -201511010 - MER41B LTR ERV1 -567 68 1 576 175 17 17 chr2 49177188 49177308 -201510546 - MER39 LTR ERV1 0 707 588 359 225 42 49 chr2 49177441 49177583 -201510271 - MER65A LTR ERV1 -304 141 1 651 142 104 0 chr2 49177583 49177689 -201510165 - MER39 LTR ERV1 -590 117 1 1044 160 90 97 chr2 49177741 49177893 -201509961 - AluJo SINE Alu -21 291 140 2078 129 0 16 chr2 49177893 49178204 -201509650 - AluSx SINE Alu -2 310 5 1044 160 90 97 chr2 49178204 49178339 -201509515 - AluJo SINE Alu -172 140 6 1000 229 28 133 chr2 49179056 49179660 -201508194 - MER34 LTR ERV1 0 542 2 1327 119 5 0 chr2 49179775 49179968 -201507886 - AluSg/x SINE Alu -20 290 97 2778 105 51 7 chr2 49179968 49180379 -201507475 - MLT2A1 LTR ERVL 0 444 16 519 147 0 0 chr2 49180380 49180455 -201507399 - AluS SINE Alu -236 76 2 2002 218 80 26 chr2 49180487 49181023 -201506831 - MER74B LTR ERVL 0 622 58 2079 99 0 0 chr2 49181063 49181372 -201506482 - AluY SINE Alu 0 310 2 26 0 0 0 chr2 49181690 49181716 -201506138 + AT_rich Low_complexity Low_complexity 1 26 0 804 164 8 0 chr2 49182200 49182322 -201505532 + AluSq/x SINE Alu 2 124 -189 2213 108 0 9 chr2 49182380 49182695 -201505159 - AluSx SINE Alu 0 312 1 879 175 6 6 chr2 49182697 49182863 -201504991 - FRAM SINE Alu -18 158 1 24 0 0 0 chr2 49183424 49183448 -201504406 + AT_rich Low_complexity Low_complexity 1 24 0 802 105 0 0 chr2 49183505 49183610 -201504244 + AluY SINE Alu 1 105 -206 487 267 84 58 chr2 49184111 49184336 -201503518 + MIR SINE MIR 20 250 -12 273 296 113 21 chr2 49184680 49184822 -201503032 + L2 LINE L2 2152 2306 -1008 229 291 12 35 chr2 49185020 49185106 -201502748 + MER34 LTR ERV1 50 133 -409 295 218 46 46 chr2 49185465 49185552 -201502302 + MER34 LTR ERV1 450 536 -6 2076 115 0 10 chr2 49185596 49185774 -201502080 - AluSc SINE Alu 0 309 134 2153 109 3 3 chr2 49185774 49186085 -201501769 - AluSp SINE Alu -2 311 1 2076 115 0 10 chr2 49186085 49186218 -201501636 - AluSc SINE Alu -175 134 1 565 306 151 26 chr2 49186243 49186593 -201501261 + L2 LINE L2 2920 3313 0 201 246 180 0 chr2 49186980 49187041 -201500813 - MIR3 SINE MIR 0 208 137 805 192 0 0 chr2 49187062 49187187 -201500667 - FLAM_C SINE Alu -17 126 2 242 355 37 0 chr2 49187192 49187299 -201500555 - MIR SINE MIR -118 144 34 3228 171 49 30 chr2 49187318 49187977 -201499877 + LTR51 LTR ERV1 1 671 0 286 254 175 69 chr2 49188275 49188464 -201499390 + MIR SINE MIR 47 255 -7 1869 141 0 3 chr2 49188628 49188911 -201498943 - AluSx SINE Alu -20 292 11 1295 101 0 0 chr2 49189061 49189240 -201498614 - AluSg/x SINE Alu 0 310 132 2096 101 0 10 chr2 49189240 49189537 -201498317 - AluSc SINE Alu -15 294 1 327 203 133 30 chr2 49189942 49190113 -201497741 + MER34 LTR ERV1 386 585 0 940 156 32 0 chr2 49190188 49190342 -201497512 - MER41B LTR ERV1 0 635 477 296 289 270 13 chr2 49190664 49190816 -201497038 - MIR SINE MIR -70 192 2 2177 105 3 0 chr2 49191392 49191688 -201496166 - AluSx SINE Alu -15 297 1 443 247 28 90 chr2 49192128 49192306 -201495548 + MIR3 SINE MIR 6 172 -36 * 775 257 45 6 chr2 49192286 49192465 -201495389 + MIR SINE MIR 13 198 -64 1736 115 96 0 chr2 49192468 49192729 -201495125 + AluSg SINE Alu 1 286 -24 213 54 95 54 chr2 49192729 49192803 -201495051 + (TA)n Simple_repeat Simple_repeat 1 77 0 461 97 32 70 chr2 49192805 49192991 -201494863 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 254 56 60 91 chr2 49192994 49193252 -201494602 + (TA)n Simple_repeat Simple_repeat 1 249 0 26 0 0 0 chr2 49193297 49193323 -201494531 + AT_rich Low_complexity Low_complexity 1 26 0 293 265 15 15 chr2 49193489 49193557 -201494297 + MER91A DNA MER1_type 36 103 -93 478 223 29 165 chr2 49194253 49194384 -201493470 - MER102b DNA MER1_type -1091 337 260 2171 111 3 0 chr2 49194384 49194690 -201493164 + AluSg SINE Alu 1 307 -3 478 223 29 165 chr2 49194690 49194831 -201493023 - MER102b DNA MER1_type -1168 260 102 242 295 137 11 chr2 49195558 49195653 -201492201 - MIR SINE MIR -109 153 47 2550 78 3 0 chr2 49195676 49195985 -201491869 - AluSp SINE Alu -3 310 1 1688 188 20 13 chr2 49196406 49196710 -201491144 - AluJb SINE Alu -4 308 3 324 0 0 0 chr2 49197450 49197486 -201490368 + (CAGG)n Simple_repeat Simple_repeat 1 36 0 2195 112 10 7 chr2 49197559 49197855 -201489999 + AluSx SINE Alu 1 297 -15 856 230 0 37 chr2 49198426 49198490 -201489364 - MER3 DNA MER1_type 0 209 144 2300 106 0 10 chr2 49198490 49198793 -201489061 + AluSx SINE Alu 1 300 -12 2285 103 13 0 chr2 49198793 49199094 -201488760 + AluSp SINE Alu 1 305 -8 856 230 0 37 chr2 49199094 49199245 -201488609 - MER3 DNA MER1_type -63 146 1 782 280 43 13 chr2 49199663 49199693 -201488161 + MIR SINE MIR 3 31 -231 2055 166 0 6 chr2 49199693 49200007 -201487847 + AluJb SINE Alu 1 312 0 782 280 43 13 chr2 49200007 49200208 -201487646 + MIR SINE MIR 31 241 -21 2046 148 0 19 chr2 49200810 49201112 -201486742 + AluSx SINE Alu 1 298 -14 432 0 0 0 chr2 49201112 49201160 -201486694 + (CA)n Simple_repeat Simple_repeat 1 48 0 2046 148 0 19 chr2 49201160 49201174 -201486680 + AluSx SINE Alu 298 311 -1 204 275 22 66 chr2 49201722 49201813 -201486041 + MIR3 SINE MIR 90 176 -32 254 278 90 35 chr2 49203011 49203155 -201484699 - L2 LINE L2 0 3272 3121 396 0 0 0 chr2 49203301 49203345 -201484509 + (TG)n Simple_repeat Simple_repeat 2 45 0 2024 145 0 40 chr2 49203525 49203850 -201484004 + AluJb SINE Alu 1 312 0 292 266 5 94 chr2 49204067 49204191 -201483663 - MIR SINE MIR -62 146 30 243 0 0 0 chr2 49204328 49204355 -201483499 + (TTA)n Simple_repeat Simple_repeat 3 29 0 373 290 57 8 chr2 49204952 49205076 -201482778 + MIR SINE MIR 113 242 -20 2279 90 17 0 chr2 49205568 49205867 -201481987 + AluSg SINE Alu 4 307 -3 1063 192 87 0 chr2 49205871 49205920 -201481934 + AluJo SINE Alu 72 115 -197 509 0 16 0 chr2 49205920 49205981 -201481873 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 1063 192 87 0 chr2 49205981 49206139 -201481715 + AluJo SINE Alu 115 297 -15 688 164 9 0 chr2 49206140 49206256 -201481598 + FLAM_C SINE Alu 2 118 -25 249 33 0 0 chr2 49206274 49206304 -201481550 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 189 0 0 0 chr2 49207090 49207111 -201480743 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 213 227 0 0 chr2 49207352 49207396 -201480458 + L2 LINE L2 3265 3308 -5 2609 147 54 63 chr2 49207797 49207891 -201479963 - MER34B LTR ERV1 0 565 472 2519 88 0 0 chr2 49207891 49208198 -201479656 + AluSq SINE Alu 1 307 -6 2609 147 54 63 chr2 49208198 49208661 -201479193 - MER34B LTR ERV1 -93 472 13 441 167 0 0 chr2 49208939 49209023 -201478831 - FLAM_C SINE Alu 0 143 60 1459 243 73 51 chr2 49210512 49210828 -201477026 + L2 LINE L2 2691 2999 -314 728 160 0 8 chr2 49210828 49210959 -201476895 + FLAM_C SINE Alu 1 130 -3 1459 243 73 51 chr2 49210959 49211236 -201476618 + L2 LINE L2 2999 3313 0 375 319 58 33 chr2 49211436 49211679 -201476175 - L2 LINE L2 -264 3008 2762 2016 142 13 3 chr2 49212211 49212520 -201475334 - AluSx SINE Alu 0 312 1 206 347 17 29 chr2 49212531 49212704 -201475150 + CT-rich Low_complexity Low_complexity 5 175 0 226 140 35 0 chr2 49212741 49212798 -201475056 - LTR37A LTR ERV1 0 426 368 1794 170 3 3 chr2 49212798 49213087 -201474767 + AluJb SINE Alu 1 289 -23 517 172 11 0 chr2 49263107 49263194 -201424660 + MER41E LTR ERV1 425 512 0 27 0 0 0 chr2 49263210 49263237 -201424617 + AT_rich Low_complexity Low_complexity 1 27 0 2102 112 0 0 chr2 49263237 49263531 -201424323 + AluSq SINE Alu 1 294 -19 1160 110 0 0 chr2 49263534 49263698 -201424156 + AluSp SINE Alu 141 304 -9 1579 134 102 14 chr2 49263701 49263839 -201424015 - AluSx SINE Alu -13 299 174 2048 113 0 3 chr2 49263839 49264130 -201423724 - AluSg SINE Alu -20 290 1 1579 134 102 14 chr2 49264130 49264266 -201423588 - AluSx SINE Alu -138 174 1 1604 160 26 13 chr2 49264298 49264605 -201423249 + AluJb SINE Alu 1 311 -1 1966 67 56 4 chr2 49264668 49264965 -201422889 + AluY SINE Alu 1 311 0 1292 202 58 7 chr2 49265194 49265337 -201422517 - AluJo SINE Alu -21 291 157 1820 161 0 13 chr2 49265337 49265642 -201422212 - AluJb SINE Alu -8 304 4 1292 202 58 7 chr2 49265642 49265775 -201422079 - AluJo SINE Alu -155 157 1 1883 139 16 7 chr2 49265857 49266166 -201421688 + AluSx SINE Alu 1 312 0 293 257 135 0 chr2 49266238 49266312 -201421542 + MIR SINE MIR 16 99 -163 2009 92 56 0 chr2 49266347 49266631 -201421223 - AluSg SINE Alu -6 304 5 236 284 30 149 chr2 49266633 49266701 -201421153 + MER5B DNA MER1_type 1 75 -103 2237 92 0 13 chr2 49266701 49267033 -201420821 + AluSp SINE Alu 1 313 0 1870 107 31 17 chr2 49267041 49267331 -201420523 + AluSc SINE Alu 1 294 -15 236 284 30 149 chr2 49267331 49267454 -201420400 + MER5B DNA MER1_type 82 177 -1 2410 68 0 10 chr2 49267496 49267805 -201420049 - AluSx SINE Alu -6 306 1 2079 101 3 0 chr2 49267873 49268169 -201419685 - AluSx SINE Alu -15 297 1 671 166 25 37 chr2 49268234 49268397 -201419457 - AluJo SINE Alu -31 281 121 1398 139 166 8 chr2 49268402 49268661 -201419193 - AluJb SINE Alu -2 300 1 478 214 83 36 chr2 49268671 49268839 -201419015 + L2 LINE L2 3138 3313 0 419 279 25 8 chr2 49270155 49270277 -201417577 + MIR SINE MIR 2 125 -137 2187 113 0 0 chr2 49270960 49271262 -201416592 - AluSx SINE Alu -10 302 1 986 93 0 0 chr2 49271292 49271421 -201416433 + AluY SINE Alu 1 129 -182 2242 72 0 0 chr2 49271421 49271700 -201416154 + AluY SINE Alu 27 305 -6 599 176 88 16 chr2 49271731 49271856 -201415998 + AluJo SINE Alu 3 136 -176 298 275 101 28 chr2 49271880 49271989 -201415865 + L2 LINE L2 3197 3313 0 2039 95 47 89 chr2 49272037 49272366 -201415488 + THE1B LTR MaLR 1 313 -51 2063 88 0 0 chr2 49272366 49272638 -201415216 - AluSc SINE Alu -13 296 25 2039 95 47 89 chr2 49272638 49272688 -201415166 + THE1B LTR MaLR 313 364 0 11894 96 6 0 chr2 49272688 49274259 -201413595 + THE1B-int LTR MaLR 1 1580 0 2086 128 82 20 chr2 49274259 49274602 -201413252 + THE1B LTR MaLR 1 364 0 1150 186 0 42 chr2 49274971 49275207 -201412647 + AluJb SINE Alu 1 226 -86 533 184 0 0 chr2 49275210 49275297 -201412557 + FLAM_C SINE Alu 36 122 -21 283 86 0 52 chr2 49275322 49275380 -201412474 + (GGGGA)n Simple_repeat Simple_repeat 4 58 0 1011 107 0 0 chr2 49275461 49275592 -201412262 - AluSq/x SINE Alu -181 131 1 1959 101 7 0 chr2 49275598 49275916 -201411938 - AluSc SINE Alu 0 320 1 1927 128 14 3 chr2 49275960 49276256 -201411598 - AluSq SINE Alu -13 300 2 1964 110 3 23 chr2 49276265 49276564 -201411290 - AluSg SINE Alu -17 293 1 1911 116 7 33 chr2 49276722 49277024 -201410830 + AluSx SINE Alu 1 294 -18 27 49 0 0 chr2 49277438 49277479 -201410375 + AT_rich Low_complexity Low_complexity 1 41 0 2090 110 0 13 chr2 49277559 49277860 -201409994 - AluSp SINE Alu -16 297 1 360 231 179 0 chr2 49277860 49278016 -201409838 - L1ME3A LINE L1 -230 5940 5757 583 108 9 72 chr2 49278047 49278158 -201409696 - AluSx SINE Alu -6 303 200 1068 127 13 0 chr2 49278158 49278316 -201409538 - AluSx SINE Alu -152 160 1 306 169 15 0 chr2 49278317 49278382 -201409472 - L1ME3A LINE L1 -396 5766 5701 1161 126 11 5 chr2 49278403 49278594 -201409260 - AluSq SINE Alu 0 313 122 633 213 33 8 chr2 49278596 49278718 -201409136 - MLT1A1 LTR MaLR -72 293 169 917 118 7 0 chr2 49278718 49278854 -201409000 - AluSq SINE Alu -176 137 1 303 139 18 0 chr2 49278855 49278920 -201408934 - L1ME LINE L1 -398 5766 5701 243 0 0 0 chr2 49279272 49279299 -201408555 + (A)n Simple_repeat Simple_repeat 1 27 0 1438 141 126 30 chr2 49279459 49279728 -201408126 - AluSq SINE Alu -18 295 1 1282 209 60 14 chr2 49279731 49280013 -201407841 - AluJo SINE Alu -6 296 2 819 184 23 40 chr2 49280035 49280209 -201407645 - FAM SINE Alu 0 175 5 1642 130 105 0 chr2 49280308 49280584 -201407270 - AluSq SINE Alu -8 305 1 1613 169 14 3 chr2 49280637 49280932 -201406922 + AluJo SINE Alu 1 298 -14 22 80 0 0 chr2 49281444 49281494 -201406360 + AT_rich Low_complexity Low_complexity 1 50 0 518 263 72 0 chr2 49281526 49281678 -201406176 + MIR SINE MIR 82 244 -18 1608 194 0 16 chr2 49281951 49282260 -201405594 + AluJo SINE Alu 1 304 -8 1593 166 7 24 chr2 49282264 49282560 -201405294 + AluJo SINE Alu 1 291 -21 1748 145 11 0 chr2 49282566 49282842 -201405012 + AluSx SINE Alu 1 279 -33 183 42 0 0 chr2 49282844 49282868 -201404986 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 674 164 25 0 chr2 49282922 49283044 -201404810 + L1MA4 LINE L1 6173 6297 -3 742 147 28 42 chr2 49283859 49283923 -201403931 - FLAM_C SINE Alu -170 142 79 2037 96 7 3 chr2 49283923 49284215 -201403639 - AluSp SINE Alu -20 293 1 742 147 28 42 chr2 49284215 49284293 -201403561 - FLAM_C SINE Alu -233 79 2 616 218 21 35 chr2 49284451 49284593 -201403261 - FLAM_C SINE Alu 0 143 4 2163 116 0 0 chr2 49284737 49285029 -201402825 - AluSx SINE Alu -20 292 1 480 150 87 94 chr2 49285050 49285177 -201402677 + FLAM_A SINE Alu 5 130 -3 2062 104 3 7 chr2 49285483 49285790 -201402064 - AluSg SINE Alu -4 306 1 300 111 0 0 chr2 49286266 49286311 -201401543 + (CCTA)n Simple_repeat Simple_repeat 1 45 0 873 159 0 0 chr2 49286331 49286469 -201401385 - AluJb SINE Alu -174 138 1 309 138 138 0 chr2 49286555 49286613 -201401241 + AluSx SINE Alu 1 66 -237 311 79 0 0 chr2 49286615 49286653 -201401201 - Alu SINE Alu -243 57 20 1588 109 4 4 chr2 49286653 49286883 -201400971 + AluSx SINE Alu 66 295 -17 2257 82 0 3 chr2 49287317 49287621 -201400233 - AluY SINE Alu -8 303 1 2213 112 0 0 chr2 49287665 49287968 -201399886 - AluSq SINE Alu -10 303 1 1791 117 33 30 chr2 49288277 49288441 -201399413 - AluSg SINE Alu -10 300 133 1909 90 6 64 chr2 49288441 49288752 -201399102 - AluSx SINE Alu -19 293 1 1791 117 33 30 chr2 49288752 49288886 -201398968 - AluSg SINE Alu -177 133 1 707 170 107 6 chr2 49288980 49289139 -201398715 + AluSp SINE Alu 134 308 -5 397 281 67 79 chr2 49289553 49289820 -201398034 - L1ME4a LINE L1 -86 6035 5772 2344 59 0 19 chr2 49290056 49290363 -201397491 - AluY SINE Alu -10 301 1 1388 69 0 0 chr2 49290367 49290540 -201397314 - AluY SINE Alu -8 303 131 1717 97 48 19 chr2 49290540 49290808 -201397046 - AluSc SINE Alu -33 276 1 222 246 72 14 chr2 49290929 49290998 -201396856 - MER5A DNA MER1_type -110 79 7 928 196 125 0 chr2 49291403 49291587 -201396267 + MER20 DNA MER1_type 8 214 -5 1406 51 0 6 chr2 49291735 49291910 -201395944 + AluY SINE Alu 1 174 -137 761 179 70 74 chr2 49292186 49292289 -201395565 - MER112 DNA MER1_type 0 256 154 1822 106 6 61 chr2 49292289 49292601 -201395253 + AluSc SINE Alu 14 308 -1 761 179 70 74 chr2 49292601 49292754 -201395100 - MER112 DNA MER1_type -102 154 1 2131 108 0 19 chr2 49293218 49293532 -201394322 - AluSg SINE Alu -2 308 1 2108 116 3 0 chr2 49293546 49293847 -201394007 - AluSp SINE Alu -10 303 2 26 74 0 0 chr2 49293908 49293962 -201393892 + AT_rich Low_complexity Low_complexity 1 54 0 1976 117 38 0 chr2 49294277 49294568 -201393286 - AluSx SINE Alu -10 302 1 23 0 0 0 chr2 49295545 49295568 -201392286 + AT_rich Low_complexity Low_complexity 1 23 0 1783 113 58 7 chr2 49295905 49296180 -201391674 + AluSc SINE Alu 19 307 -2 2183 88 3 7 chr2 49296192 49296489 -201391365 + AluSp SINE Alu 1 296 -17 315 0 0 0 chr2 49296619 49296654 -201391200 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6602 73 16 27 chr2 49296654 49298795 -201389059 - SVA Other Other -520 1369 4 2226 106 6 3 chr2 49299367 49299679 -201388175 - AluSp SINE Alu 0 313 1 2387 90 0 13 chr2 49299735 49300045 -201387809 - AluSg SINE Alu -4 306 1 2016 125 10 7 chr2 49300211 49300508 -201387346 - AluSx SINE Alu -11 301 4 1358 128 29 0 chr2 49300606 49300810 -201387044 - AluSg/x SINE Alu -18 292 83 315 0 0 0 chr2 49301643 49301678 -201386176 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1503 150 82 29 chr2 49301918 49302198 -201385656 - AluJb SINE Alu -17 295 1 319 318 155 38 chr2 49302485 49302749 -201385105 + L2 LINE L2 2806 3100 -172 2372 70 0 13 chr2 49303435 49303735 -201384119 + AluY SINE Alu 12 307 -4 1338 175 26 55 chr2 49303931 49304239 -201383615 - AluJb SINE Alu -11 301 3 647 181 0 0 chr2 49304398 49304503 -201383351 - FLAM_A SINE Alu -1 141 37 2081 97 10 29 chr2 49304514 49304824 -201383030 - AluSg SINE Alu -6 304 1 1989 141 0 3 chr2 49305028 49305326 -201382528 - AluSx SINE Alu -15 297 1 980 199 65 14 chr2 49305329 49305545 -201382309 - L1PB4 LINE L1 0 6156 5930 1798 156 7 3 chr2 49305551 49305857 -201381997 - AluSx SINE Alu 0 307 1 2058 114 35 0 chr2 49305942 49306231 -201381623 - AluSg SINE Alu -11 299 1 228 36 0 0 chr2 49306233 49306261 -201381593 - L1PB4 LINE L1 -325 5826 5799 256 175 0 18 chr2 49306261 49306318 -201381536 + LTR66 LTR ERVL 383 438 -172 234 174 0 0 chr2 49306351 49306397 -201381457 + LTR66 LTR ERVL 394 439 -171 306 244 12 23 chr2 49306418 49306504 -201381350 + L1MC4 LINE L1 6619 6703 -1339 191 114 29 0 chr2 49306509 49306544 -201381310 + (TATG)n Simple_repeat Simple_repeat 2 37 0 254 249 44 0 chr2 49306546 49306659 -201381195 + L1MC4 LINE L1 1995 6982 -1340 238 247 99 0 chr2 49306625 49306706 -201381148 - L1MC4 LINE L1 -1340 6702 6614 * 3798 89 28 10 chr2 49306705 49307332 -201380522 - L1P5 LINE L1 -360 5791 5162 316 93 0 0 chr2 49307332 49307375 -201380479 - Alu SINE Alu -9 293 251 * 618 188 0 8 chr2 49307372 49307489 -201380365 - Charlie4 DNA MER1_type -1784 177 62 379 241 29 29 chr2 49307961 49308098 -201379756 - Tigger1 DNA MER2_type -1314 1104 968 390 300 167 0 chr2 49308736 49308946 -201378908 - MIR SINE MIR -15 247 3 1988 161 0 10 chr2 49308992 49309303 -201378551 - AluSx SINE Alu -4 308 1 1385 209 13 32 chr2 49310254 49310569 -201377285 - AluJo SINE Alu -3 309 1 1935 125 54 0 chr2 49310935 49311231 -201376623 - AluSq SINE Alu -1 312 1 2364 86 3 0 chr2 49311389 49311692 -201376162 - AluSp SINE Alu -1 312 9 1632 204 11 0 chr2 49311705 49311985 -201375869 - AluJo SINE Alu -29 283 1 2202 131 0 0 chr2 49311999 49312311 -201375543 - AluSp SINE Alu -1 312 1 2322 119 3 0 chr2 49312958 49313269 -201374585 + AluSx SINE Alu 1 312 0 523 257 125 7 chr2 49313363 49313515 -201374339 - MER5A DNA MER1_type -7 182 13 2231 117 0 13 chr2 49313547 49313863 -201373991 - AluSx SINE Alu 0 312 1 22 0 0 0 chr2 49314268 49314290 -201373564 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 49314428 49314458 -201373396 + AT_rich Low_complexity Low_complexity 1 30 0 2026 131 3 13 chr2 49314458 49314594 -201373260 + AluSx SINE Alu 1 137 -175 2481 80 0 0 chr2 49314594 49314905 -201372949 + AluY SINE Alu 1 311 0 2026 131 3 13 chr2 49314905 49315066 -201372788 + AluSx SINE Alu 137 295 -17 773 247 97 99 chr2 49315163 49315352 -201372502 - MER34B LTR ERV1 -1 564 376 2942 90 0 3 chr2 49315352 49315717 -201372137 - THE1B LTR MaLR 0 364 1 773 247 97 99 chr2 49315717 49316085 -201371769 - MER34B LTR ERV1 -189 376 8 2373 97 0 0 chr2 49316429 49316738 -201371116 - AluY SINE Alu -2 309 1 2412 88 0 3 chr2 49318370 49318678 -201369176 + AluY SINE Alu 1 307 -4 6345 39 11 0 chr2 49318911 49319665 -201368189 - L1PA5 LINE L1 0 6154 5393 8701 121 28 6 chr2 49319719 49320992 -201366862 - HSMAR2 DNA Mariner 0 1302 2 264 250 0 0 chr2 49321001 49321065 -201366789 - HAL1b LINE L1 -57 1291 1228 1828 187 50 21 chr2 49321188 49321499 -201366355 - L1MB7 LINE L1 -43 6141 5816 2576 119 77 15 chr2 49321499 49321901 -201365953 - MSTA LTR MaLR 0 428 2 1828 187 50 21 chr2 49321901 49321969 -201365885 - L1MB7 LINE L1 -368 5816 5751 1606 164 0 15 chr2 49321970 49322239 -201365615 - AluJo SINE Alu -32 280 16 305 287 107 73 chr2 49322526 49322761 -201365093 - L1MEc LINE L1 -3707 2508 2258 2342 85 0 0 chr2 49322761 49323056 -201364798 - AluSx SINE Alu -17 295 1 305 287 107 73 chr2 49323056 49323137 -201364717 - L1MEc LINE L1 -3957 2258 2181 843 161 0 0 chr2 49323209 49323327 -201364527 - FLAM_C SINE Alu -15 118 1 269 261 0 0 chr2 49323719 49323788 -201364066 - L1MEc LINE L1 -4724 1672 1604 2219 104 13 3 chr2 49323791 49324089 -201363765 - AluSq SINE Alu -11 302 2 391 322 76 38 chr2 49324742 49325059 -201362795 - L1MC4a LINE L1 -1976 5832 5504 22 0 0 0 chr2 49325066 49325088 -201362766 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 49325341 49325365 -201362489 + AT_rich Low_complexity Low_complexity 1 24 0 2266 63 12 75 chr2 49325783 49326114 -201361740 - AluY SINE Alu -1 310 1 1065 97 6 17 chr2 49326122 49326298 -201361556 + (TTTTC)n Simple_repeat Simple_repeat 4 177 0 1838 148 4 0 chr2 49326301 49326571 -201361283 - AluSx SINE Alu -36 276 6 275 241 0 0 chr2 49327931 49327989 -201359865 - MIR3 SINE MIR -52 156 99 1914 172 0 10 chr2 49328150 49328452 -201359402 + AluJb SINE Alu 1 299 -13 1416 171 58 55 chr2 49328461 49328754 -201359100 + AluJb SINE Alu 1 294 -18 26 74 0 0 chr2 49328856 49328910 -201358944 + AT_rich Low_complexity Low_complexity 1 54 0 261 372 35 18 chr2 49328956 49329069 -201358785 + MIR3 SINE MIR 9 123 -85 4806 116 1 13 chr2 49329669 49330341 -201357513 - MER4A LTR ERV1 0 664 1 245 247 24 12 chr2 49331131 49331212 -201356642 - L1MC4a LINE L1 -1179 4967 4881 2375 58 41 0 chr2 49331368 49331661 -201356193 - AluY SINE Alu -6 305 1 2077 142 0 7 chr2 49331666 49331968 -201355886 - AluSx SINE Alu -12 300 1 41 0 0 0 chr2 49332193 49332234 -201355620 + AT_rich Low_complexity Low_complexity 1 41 0 237 317 65 24 chr2 49332391 49332514 -201355340 - MIR SINE MIR -18 244 117 1537 160 59 7 chr2 49333177 49333464 -201354390 - AluJb SINE Alu -10 302 1 2007 145 0 3 chr2 49333528 49333824 -201354030 + AluSx SINE Alu 1 295 -17 2264 85 0 10 chr2 49333826 49334120 -201353734 + AluY SINE Alu 1 291 -20 2012 116 25 0 chr2 49334230 49334514 -201353340 - AluSp SINE Alu -2 311 21 2204 92 0 57 chr2 49334558 49334875 -201352979 - AluSp SINE Alu -14 299 1 21 0 0 0 chr2 49335149 49335170 -201352684 + AT_rich Low_complexity Low_complexity 1 21 0 1045 246 119 32 chr2 49335893 49336356 -201351498 + L1MC4 LINE L1 7352 7854 -188 21 0 0 0 chr2 49336634 49336655 -201351199 + AT_rich Low_complexity Low_complexity 1 21 0 1828 158 0 17 chr2 49336795 49337087 -201350767 + AluJo SINE Alu 1 287 -25 1365 191 46 40 chr2 49337207 49337510 -201350344 - AluJo SINE Alu -7 305 1 2462 103 0 0 chr2 49337667 49337979 -201349875 + AluSx SINE Alu 1 312 0 1660 151 35 56 chr2 49338681 49339000 -201348854 - AluSx SINE Alu 0 312 1 183 42 0 0 chr2 49339532 49339556 -201348298 + (T)n Simple_repeat Simple_repeat 1 24 0 850 136 0 36 chr2 49341347 49341487 -201346367 - FLAM_C SINE Alu -1 142 8 263 268 54 89 chr2 49341831 49341999 -201345855 - L1ME LINE L1 -568 5553 5392 470 60 0 15 chr2 49342084 49342151 -201345703 + (TCCC)n Simple_repeat Simple_repeat 1 66 0 911 113 73 0 chr2 49342197 49342321 -201345533 - FLAM_C SINE Alu 0 133 1 2284 68 29 0 chr2 49342975 49343254 -201344600 - AluSx SINE Alu -25 287 1 341 188 22 55 chr2 49344238 49344419 -201343435 + CT-rich Low_complexity Low_complexity 6 180 0 * 617 200 6 28 chr2 49344381 49344561 -201343293 + C-rich Low_complexity Low_complexity 3 178 0 2228 73 0 20 chr2 49345700 49346025 -201341829 - AluY SINE Alu 0 311 1 180 0 0 0 chr2 49346026 49346046 -201341808 + (T)n Simple_repeat Simple_repeat 1 20 0 315 176 165 12 chr2 49346497 49346582 -201341272 - MIR SINE MIR -89 173 76 481 84 0 14 chr2 49346821 49346892 -201340962 + FLAM_A SINE Alu 72 141 -1 192 316 15 73 chr2 49347604 49347740 -201340114 - MER5B DNA MER1_type -16 162 35 394 240 50 40 chr2 49347825 49347925 -201339929 + L1MA10 LINE L1 4886 4986 -1160 1318 161 63 20 chr2 49347927 49348181 -201339673 + AluJb SINE Alu 35 299 -13 406 248 111 90 chr2 49348189 49348423 -201339431 + L1ME3A LINE L1 4994 5232 -914 701 163 148 15 chr2 49348429 49348564 -201339290 + AluJo SINE Alu 122 274 -38 2982 200 105 13 chr2 49348599 49349433 -201338421 + L1MA10 LINE L1 5270 6334 0 397 277 85 0 chr2 49349426 49349603 -201338251 + L1ME3A LINE L1 5328 5519 -645 * 362 233 147 17 chr2 49349614 49349879 -201337975 + L1ME3A LINE L1 5577 5942 -228 2022 67 43 0 chr2 49352534 49352787 -201335067 + AluY SINE Alu 1 264 -47 659 154 26 0 chr2 49352912 49353029 -201334825 - MIR SINE MIR -110 152 33 310 260 120 0 chr2 49353701 49353801 -201334053 + MIR3 SINE MIR 46 157 -51 2424 97 7 0 chr2 49354520 49354830 -201333024 - AluSx SINE Alu 0 312 1 348 266 157 71 chr2 49354854 49355121 -201332733 + HAL1 LINE L1 1830 2119 -388 1224 127 0 0 chr2 49355122 49355295 -201332559 - AluSg/x SINE Alu -11 301 129 2860 26 0 0 chr2 49355301 49355612 -201332242 - AluYa5 SINE Alu 0 311 1 1440 135 69 62 chr2 49355679 49355967 -201331887 + AluJo SINE Alu 6 295 -17 502 227 119 34 chr2 49356010 49356186 -201331668 + HAL1 LINE L1 2281 2471 -36 763 185 67 31 chr2 49356475 49356670 -201331184 + L1MB8 LINE L1 5977 6178 0 1293 89 6 0 chr2 49356748 49356928 -201330926 + LTR3 LTR ERVK 252 432 0 270 244 122 0 chr2 49356934 49357016 -201330838 - MIR SINE MIR -85 177 86 924 240 94 50 chr2 49357023 49357365 -201330489 - MLT1J LTR MaLR -59 452 96 210 253 13 51 chr2 49359253 49359332 -201328522 - MIR3 SINE MIR -9 199 124 1683 217 64 64 chr2 49359927 49360430 -201327424 - MER21B LTR ERV1 -125 738 236 1026 219 0 5 chr2 49360430 49360626 -201327228 + AluJo SINE Alu 1 195 -117 716 237 9 99 chr2 49360641 49360873 -201326981 - MER21B LTR ERV1 -639 224 14 1324 122 0 11 chr2 49361589 49361764 -201326090 - AluSg/x SINE Alu -4 308 134 2317 100 0 10 chr2 49361764 49362063 -201325791 - AluSx SINE Alu -16 296 1 1324 122 0 11 chr2 49362063 49362076 -201325778 - AluSg/x SINE Alu -178 134 122 1528 204 120 25 chr2 49362195 49362637 -201325217 + MER31A LTR ERV1 2 485 0 2096 141 13 3 chr2 49362650 49362956 -201324898 + AluJo SINE Alu 1 309 -3 2069 148 3 3 chr2 49363022 49363312 -201324542 - AluSx SINE Alu -22 290 1 245 358 0 0 chr2 49363324 49363419 -201324435 + MIR SINE MIR 162 256 -6 244 314 118 20 chr2 49363490 49363643 -201324211 + MER91A DNA MER1_type 29 196 0 2603 159 12 50 chr2 49363858 49364375 -201323479 + LOR1a LTR ERV1 1 497 0 182 352 38 38 chr2 49364601 49364706 -201323148 - MIR SINE MIR -69 139 35 1033 148 19 0 chr2 49364835 49364997 -201322857 - AluJb SINE Alu -14 298 134 2291 118 3 10 chr2 49364997 49365310 -201322544 - AluSx SINE Alu -1 311 1 2087 145 0 0 chr2 49365312 49365616 -201322238 - AluSx SINE Alu -8 304 1 227 338 0 0 chr2 49365619 49365687 -201322167 - MIR SINE MIR -83 125 58 1398 95 0 0 chr2 49366603 49366927 -201320927 + (TGGA)n Simple_repeat Simple_repeat 1 324 0 443 243 52 7 chr2 49367004 49367140 -201320714 - MIR SINE MIR -30 232 91 1450 210 17 74 chr2 49369147 49369499 -201318355 + MER77 LTR ERV1 1 332 -273 240 241 19 0 chr2 49369503 49369557 -201318297 + Tigger5 DNA MER2_type 1 55 -2268 * 280 212 106 0 chr2 49369526 49369592 -201318262 + Tigger5 DNA MER2_type 2251 2323 0 1482 178 12 0 chr2 49369607 49369849 -201318005 + MER77 LTR ERV1 359 603 -2 252 325 24 24 chr2 49370201 49370327 -201317527 - MIR SINE MIR -48 214 89 480 221 0 0 chr2 49370435 49370530 -201317324 - MLT1I LTR MaLR 0 409 315 964 113 6 6 chr2 49371209 49371368 -201316486 + (TC)n Simple_repeat Simple_repeat 2 160 0 2086 152 3 0 chr2 49371387 49371696 -201316158 + AluSx SINE Alu 1 310 -2 1720 169 7 14 chr2 49371698 49371982 -201315872 - AluJo SINE Alu -30 282 1 229 232 130 0 chr2 49372780 49372849 -201315005 - MLT1K LTR MaLR -4 584 507 257 311 48 10 chr2 49373123 49373226 -201314628 + LTR67 LTR ERVL 96 202 -355 232 194 65 0 chr2 49373913 49373975 -201313879 + LTR67 LTR ERVL 491 556 -1 622 302 53 40 chr2 49374242 49374639 -201313215 + MLT1J LTR MaLR 110 511 0 257 241 35 35 chr2 49375253 49375340 -201312514 + L2 LINE L2 3227 3313 0 965 202 56 0 chr2 49376003 49376201 -201311653 + MER3 DNA MER1_type 1 209 0 266 336 52 26 chr2 49376900 49377016 -201310838 + LTR33A LTR ERVL 40 158 -365 308 280 43 0 chr2 49377208 49377301 -201310553 + MLT1J LTR MaLR 110 206 -305 670 301 182 34 chr2 49377479 49378665 -201309189 + L2 LINE L2 1866 3231 -41 210 314 162 0 chr2 49378672 49378777 -201309077 + MIR SINE MIR 92 213 -49 2057 158 0 3 chr2 49378825 49379136 -201308718 - AluJb SINE Alu -2 310 1 189 339 18 0 chr2 49379256 49379312 -201308542 - L3b LINE CR1 -5 1578 1522 308 281 84 54 chr2 49379477 49379558 -201308296 - MER112 DNA MER1_type -1 259 182 770 125 86 0 chr2 49379558 49379686 -201308168 - MER85 DNA T2_type 0 139 1 308 281 84 54 chr2 49379686 49379771 -201308083 - MER112 DNA MER1_type -78 182 88 291 253 115 36 chr2 49380224 49380385 -201307469 - MIR SINE MIR -58 150 10 376 315 48 18 chr2 49380413 49380578 -201307276 + MER5B DNA MER1_type 6 175 -3 180 219 0 0 chr2 49381796 49381837 -201306017 + (TATG)n Simple_repeat Simple_repeat 1 41 0 203 327 195 0 chr2 49382680 49382793 -201305061 + L3b LINE CR1 1317 1451 -132 204 233 0 0 chr2 49383506 49383549 -201304305 + (TG)n Simple_repeat Simple_repeat 2 44 0 249 277 139 10 chr2 49386595 49386696 -201301158 - Charlie1 DNA MER1_type -2607 154 41 900 171 34 28 chr2 49386709 49386885 -201300969 - AluJo SINE Alu -19 293 117 707 223 50 0 chr2 49388533 49388735 -201299119 + L1ME3 LINE L1 5739 5950 -220 411 252 78 48 chr2 49388766 49388972 -201298882 + L1ME3 LINE L1 5926 6137 -25 180 0 0 0 chr2 49390313 49390333 -201297521 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2220 100 6 37 chr2 49390337 49390658 -201297196 + AluY SINE Alu 1 311 0 2237 115 0 16 chr2 49390674 49390988 -201296866 + AluSx SINE Alu 1 309 -3 427 292 82 15 chr2 49391164 49391359 -201296495 - MIR SINE MIR -54 208 1 345 238 48 48 chr2 49392048 49392153 -201295701 - L2 LINE L2 0 3272 3168 194 331 81 0 chr2 49393135 49393271 -201294583 - MIR SINE MIR -70 192 46 576 171 19 0 chr2 49393383 49393488 -201294366 + MER94 DNA DNA 23 129 -5 253 209 105 105 chr2 49393488 49393593 -201294261 + MER5A DNA MER1_type 63 167 -22 287 231 70 0 chr2 49393814 49393901 -201293953 + MLT1L LTR MaLR 136 232 -356 926 114 49 22 chr2 49394020 49394204 -201293650 - MER53 DNA DNA 0 189 1 409 218 20 30 chr2 49394749 49394850 -201293004 - MIR SINE MIR -1 261 162 643 216 41 18 chr2 49394858 49395029 -201292825 + MER104 DNA Tc2 6 180 0 326 175 40 135 chr2 49395029 49395155 -201292699 - MIR SINE MIR -101 161 48 353 258 10 10 chr2 49395235 49395332 -201292522 + MER5B DNA MER1_type 1 97 -81 2169 132 0 0 chr2 49395415 49395710 -201292144 + AluJo SINE Alu 1 295 -17 225 197 132 40 chr2 49396079 49396155 -201291699 + MER51C LTR ERV1 347 429 -211 611 107 0 48 chr2 49396196 49396299 -201291555 + AluSg/x SINE Alu 208 305 -7 549 183 92 33 chr2 49396300 49396453 -201291401 - L2 LINE L2 0 3313 3152 425 213 12 0 chr2 49396488 49396568 -201291286 + MER51A LTR ERV1 470 550 -84 1182 133 0 22 chr2 49396570 49396750 -201291104 - FRAM SINE Alu 0 176 1 522 198 0 16 chr2 49396757 49396878 -201290976 + MER51C LTR ERV1 522 640 0 281 332 25 40 chr2 49397125 49397230 -201290624 + MIR SINE MIR 49 151 -111 2346 98 7 0 chr2 49397230 49397535 -201290319 - AluSx SINE Alu -5 307 1 281 332 25 40 chr2 49397535 49397631 -201290223 + MIR SINE MIR 151 247 -15 259 297 188 8 chr2 49399803 49399931 -201287923 - MIR SINE MIR -13 249 99 284 218 121 48 chr2 49400111 49400235 -201287619 - MIR3 SINE MIR -73 135 3 220 275 25 25 chr2 49400731 49400811 -201287043 - L2 LINE L2 -5 3267 3188 2305 202 27 29 chr2 49400815 49401375 -201286479 - MER90 LTR ERV1 -16 559 1 2446 76 0 3 chr2 49401552 49401853 -201286001 - AluSc SINE Alu -9 300 1 1139 225 112 41 chr2 49402316 49402681 -201285173 - L2 LINE L2 -3 3310 2920 2133 116 0 0 chr2 49402713 49402981 -201284873 + AluSx SINE Alu 1 268 -44 281 377 0 0 chr2 49403311 49403417 -201284437 - MIR SINE MIR -62 200 95 215 264 139 0 chr2 49403609 49403681 -201284173 - L2 LINE L2 -613 2701 2620 203 277 77 56 chr2 49403704 49403899 -201283955 - L2 LINE L2 -1212 2102 1904 513 297 114 5 chr2 49404133 49404352 -201283502 + MIR SINE MIR 4 246 -16 1762 162 14 0 chr2 49404868 49404997 -201282857 + AluJb SINE Alu 1 127 -185 243 0 0 0 chr2 49404997 49405024 -201282830 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1762 162 14 0 chr2 49405024 49405172 -201282682 + AluJb SINE Alu 127 282 -30 212 367 58 25 chr2 49405633 49405753 -201282101 + L3b LINE CR1 1430 1553 -30 2035 177 14 6 chr2 49405754 49406136 -201281718 + MLT1B LTR MaLR 1 422 -6 240 35 0 0 chr2 49406203 49406232 -201281622 + (CAG)n Simple_repeat Simple_repeat 2 30 0 1095 178 6 0 chr2 49407144 49407318 -201280536 - FAM SINE Alu 0 175 1 300 285 106 22 chr2 49407584 49407721 -201280133 - MIR SINE MIR -62 146 46 713 281 20 15 chr2 49409790 49409993 -201277861 + MIR SINE MIR 19 222 -40 1338 151 0 10 chr2 49410684 49410890 -201276964 + AluJb SINE Alu 86 289 -23 258 362 47 8 chr2 49410899 49411026 -201276828 + HAL1 LINE L1 1 132 -2375 536 214 34 8 chr2 49411251 49411368 -201276486 + HAL1 LINE L1 757 876 -1631 698 224 35 29 chr2 49411478 49411652 -201276202 - MER5B DNA MER1_type -2 176 2 839 131 0 36 chr2 49411665 49411802 -201276052 - FRAM SINE Alu -14 162 31 1510 142 0 0 chr2 49411815 49412050 -201275804 - AluSg/x SINE Alu 0 305 71 200 188 0 0 chr2 49412060 49412092 -201275762 + MER5B DNA MER1_type 2 33 -145 2001 105 147 8 chr2 49412092 49412445 -201275409 + MSTA LTR MaLR 1 402 -26 1286 237 14 42 chr2 49412472 49412831 -201275023 + L2 LINE L2 2206 2554 -760 2628 281 63 54 chr2 49412831 49413878 -201273976 + L1MEc LINE L1 36 1072 -5324 2461 86 0 0 chr2 49413878 49414179 -201273675 + AluSg SINE Alu 1 301 -9 2628 281 63 54 chr2 49414179 49414603 -201273251 + L1MEc LINE L1 1072 1524 -4872 2519 86 0 0 chr2 49414603 49414907 -201272947 - AluSx SINE Alu -8 304 1 2628 281 63 54 chr2 49414907 49414967 -201272887 + L1MEc LINE L1 1524 1582 -4814 1635 217 55 80 chr2 49415027 49415800 -201272054 + L2 LINE L2 2541 3313 0 2158 140 0 0 chr2 49416720 49417020 -201270834 + AluSx SINE Alu 11 310 -2 246 181 0 0 chr2 49417650 49417698 -201270156 - Alu SINE Alu -24 278 241 307 279 54 39 chr2 49417864 49417993 -201269861 + L2 LINE L2 2685 2815 -499 188 378 78 0 chr2 49418116 49418206 -201269648 + MIR SINE MIR 10 106 -156 391 319 35 0 chr2 49418214 49418355 -201269499 - MIR SINE MIR 0 262 117 1620 280 87 53 chr2 49418384 49419436 -201268418 - L2 LINE L2 -44 3269 2201 801 231 94 87 chr2 49419443 49419964 -201267890 + MER34B LTR ERV1 1 542 0 2244 292 175 21 chr2 49419996 49421249 -201266605 - L2 LINE L2 -1171 2143 698 1435 209 65 41 chr2 49421339 49421726 -201266128 + MSTD LTR MaLR 1 396 0 403 349 20 13 chr2 49422336 49422488 -201265366 - L2 LINE L2 -3 3269 3117 243 273 0 0 chr2 49423677 49423732 -201264122 - L2 LINE L2 -1 3312 3258 197 308 39 26 chr2 49423870 49423948 -201263906 - MIR SINE MIR 0 262 184 314 258 94 44 chr2 49424053 49424212 -201263642 - L2 LINE L2 -246 3026 2860 417 225 100 52 chr2 49424760 49424959 -201262895 + MIR SINE MIR 18 228 -34 522 294 55 60 chr2 49425866 49426101 -201261753 - MIR SINE MIR -27 235 2 583 293 39 6 chr2 49426138 49426319 -201261535 - MIR3 SINE MIR -15 193 7 411 261 194 0 chr2 49426325 49426459 -201261395 + MER5A DNA MER1_type 30 189 0 191 59 0 29 chr2 49427569 49427603 -201260251 + (TG)n Simple_repeat Simple_repeat 1 33 0 216 169 282 0 chr2 49427709 49427780 -201260074 + MIR SINE MIR 56 146 -62 437 253 76 30 chr2 49428538 49428736 -201259118 + L1ME LINE L1 5612 5818 -303 292 261 130 11 chr2 49428919 49429011 -201258843 - L2 LINE L2 -2 3311 3209 1505 211 3 11 chr2 49429120 49429404 -201258450 + AluJo SINE Alu 11 292 -20 204 125 0 0 chr2 49430646 49430678 -201257176 + (CA)n Simple_repeat Simple_repeat 2 33 0 225 297 40 0 chr2 49431037 49431111 -201256743 + MIR SINE MIR 47 123 -85 203 291 0 38 chr2 49433184 49433263 -201254591 + G-rich Low_complexity Low_complexity 2 77 0 282 179 26 26 chr2 49434470 49434548 -201253306 + (CGG)n Simple_repeat Simple_repeat 1 78 0 28 29 0 0 chr2 49434569 49434604 -201253250 + GC_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr2 49434883 49434919 -201252935 + GC_rich Low_complexity Low_complexity 1 36 0 402 100 0 0 chr2 49438127 49438187 -201249667 + (CA)n Simple_repeat Simple_repeat 1 60 0 3027 147 31 16 chr2 49438238 49438783 -201249071 + L1MB8 LINE L1 5626 6178 0 2273 109 0 28 chr2 49438794 49439114 -201248740 + AluY SINE Alu 1 311 0 2677 46 0 0 chr2 49439174 49439478 -201248376 + AluY SINE Alu 1 304 -7 718 272 5 0 chr2 49440483 49440689 -201247165 - L1M4 LINE L1 -3538 2608 2402 281 262 0 0 chr2 49440690 49440751 -201247103 + Tigger5 DNA MER2_type 2 62 -2261 * 569 175 0 8 chr2 49440746 49440866 -201246988 + Tigger5 DNA MER2_type 2059 2177 -146 640 194 25 55 chr2 49441044 49441076 -201246778 - L1M4 LINE L1 -3743 2403 2372 1485 176 145 0 chr2 49441076 49441331 -201246523 - AluJo SINE Alu -10 292 1 640 194 25 55 chr2 49441331 49441499 -201246355 - L1M4 LINE L1 -3774 2372 2209 188 267 0 0 chr2 49441575 49441620 -201246234 - L2 LINE L2 -12 3301 3257 450 0 0 0 chr2 49441625 49441675 -201246179 + (TG)n Simple_repeat Simple_repeat 1 50 0 224 360 54 29 chr2 49441799 49442038 -201245816 - L2 LINE L2 -181 3091 2847 275 256 19 79 chr2 49442785 49443051 -201244803 - L1ME4a LINE L1 -11 6110 5861 362 224 13 0 chr2 49443063 49443139 -201244715 - L2 LINE L2 -5 3308 3232 612 234 114 91 chr2 49443356 49443707 -201244147 + MLT1J LTR MaLR 8 366 -145 219 139 0 0 chr2 49444618 49444654 -201243200 + (TCCC)n Simple_repeat Simple_repeat 2 37 0 2183 78 0 4 chr2 49444664 49444932 -201242922 - AluY SINE Alu -1 310 44 212 236 109 0 chr2 49444932 49444987 -201242867 - MIR SINE MIR -18 244 184 255 312 165 6 chr2 49445764 49445934 -201241920 - L2 LINE L2 0 3313 3117 190 258 169 45 chr2 49446121 49446152 -201241702 - L2 LINE L2 -493 2821 2795 4203 89 5 0 chr2 49446152 49446703 -201241151 - MER41A LTR ERV1 0 554 1 190 258 169 45 chr2 49446703 49446760 -201241094 - L2 LINE L2 -519 2795 2722 893 125 0 20 chr2 49446880 49447032 -201240822 - LTR7 LTR ERV1 0 450 302 870 118 8 18 chr2 49447230 49447398 -201240456 - LTR7 LTR ERV1 -232 218 1 21249 208 32 41 chr2 49447398 49455288 -201232566 - HERVH LTR ERV1 0 7713 1 958 162 69 25 chr2 49455288 49455492 -201232362 - LTR7 LTR ERV1 0 450 238 928 108 21 13 chr2 49455706 49455871 -201231983 - LTR7 LTR ERV1 -232 218 1 3409 144 0 19 chr2 49456301 49456842 -201231012 - LTR26B LTR ERV1 0 531 1 1353 168 66 31 chr2 49456988 49457296 -201230558 + L1MB7 LINE L1 5848 6184 0 1481 179 69 18 chr2 49457296 49457755 -201230099 + LTR54 LTR ERV1 1 496 -2 1005 192 67 36 chr2 49458814 49458849 -201229005 - MIR SINE MIR -6 256 224 3654 86 4 6 chr2 49458849 49459336 -201228518 + LTR19A LTR ERV1 1 486 0 1005 192 67 36 chr2 49459336 49459524 -201228330 - MIR SINE MIR -38 224 26 711 12 0 0 chr2 49459897 49459977 -201227877 - LTR26B LTR ERV1 -451 80 1 600 264 157 59 chr2 49461122 49461478 -201226376 + MLT1K LTR MaLR 70 460 -128 2100 153 16 16 chr2 49461515 49461841 -201226013 - L1MB5 LINE L1 -33 6141 5813 3043 122 7 0 chr2 49461841 49462266 -201225588 - MSTA LTR MaLR 0 428 1 2100 153 16 16 chr2 49462266 49462304 -201225550 - L1MB5 LINE L1 -360 5814 5777 377 162 29 0 chr2 49462304 49462372 -201225482 - AluJ/FRAM SINE Alu -5 297 228 776 157 0 8 chr2 49462392 49462513 -201225341 - FLAM_C SINE Alu -18 125 6 1266 167 0 0 chr2 49462519 49462729 -201225125 - L1MB5 LINE L1 -388 5786 5577 2171 132 52 9 chr2 49463164 49463513 -201224341 + MLT1A1 LTR MaLR 1 364 -1 329 358 22 0 chr2 49463527 49463661 -201224193 + MIR3 SINE MIR 27 163 -45 194 302 0 16 chr2 49463735 49463798 -201224056 - MIR3 SINE MIR -3 205 144 243 0 0 0 chr2 49464141 49464168 -201223686 + (CA)n Simple_repeat Simple_repeat 2 28 0 2727 161 68 45 chr2 49466300 49466370 -201221484 - L1MB8 LINE L1 0 6178 6111 2086 131 0 3 chr2 49466370 49466682 -201221172 + AluSq SINE Alu 3 313 0 2727 161 68 45 chr2 49466682 49467189 -201220665 - L1MB8 LINE L1 -67 6111 5588 21 36 0 0 chr2 49467203 49467231 -201220623 + AT_rich Low_complexity Low_complexity 1 28 0 329 236 14 0 chr2 49467334 49467406 -201220448 - L2 LINE L2 -3 3310 3238 281 232 18 0 chr2 49467439 49467495 -201220359 - L2 LINE L2 -521 2793 2737 575 195 58 32 chr2 49467497 49467514 -201220340 - L1MA10 LINE L1 0 6334 6318 2075 221 185 48 chr2 49467514 49468293 -201219561 - L1ME2 LINE L1 -9 6155 5270 2312 84 3 0 chr2 49468421 49468720 -201219134 + AluSp SINE Alu 2 301 -12 295 232 110 24 chr2 49468955 49469037 -201218817 - MER39 LTR ERV1 0 684 497 740 258 98 64 chr2 49469040 49469495 -201218359 - MER39 LTR ERV1 -58 643 1 2007 147 0 6 chr2 49469930 49470242 -201217612 + AluSx SINE Alu 1 310 -2 210 309 148 0 chr2 49470340 49470502 -201217352 + L2 LINE L2 2865 3050 -222 223 366 62 0 chr2 49470774 49470886 -201216968 - MIR SINE MIR -68 140 22 182 227 76 15 chr2 49470936 49471002 -201216852 - MIR SINE MIR -125 137 68 1281 209 11 28 chr2 49471047 49471329 -201216525 - L1MB5 LINE L1 -23 6151 5875 2220 98 0 3 chr2 49472441 49472748 -201215106 - AluSg SINE Alu -4 306 1 835 158 40 0 chr2 49473204 49473356 -201214498 - FRAM SINE Alu -10 166 9 1991 117 0 3 chr2 49474067 49474369 -201213485 + AluSx SINE Alu 1 301 0 25 51 0 0 chr2 49474391 49474430 -201213424 + AT_rich Low_complexity Low_complexity 1 39 0 235 188 0 21 chr2 49474584 49474639 -201213215 - MLT1H1 LTR MaLR -414 135 49 1550 287 114 8 chr2 49474822 49475355 -201212499 - MLT1G1 LTR MaLR -5 590 1 2130 107 7 0 chr2 49475621 49475920 -201211934 + AluSx SINE Alu 1 301 -11 1314 188 80 28 chr2 49475940 49476227 -201211627 + AluJo SINE Alu 1 302 0 325 326 39 0 chr2 49477694 49477823 -201210031 + MIR3 SINE MIR 29 162 -46 1448 154 0 0 chr2 49477868 49478089 -201209765 + AluSx SINE Alu 1 221 -91 1926 154 30 6 chr2 49479567 49479905 -201207949 + MSTA LTR MaLR 81 426 -2 435 261 147 82 chr2 49479921 49479948 -201207906 - L2 LINE L2 -583 2731 2707 1743 145 25 4 chr2 49479948 49480301 -201207553 - AluSx SINE Alu 0 359 1 435 261 147 82 chr2 49480301 49480782 -201207072 - L2 LINE L2 -607 2707 2189 659 133 133 9 chr2 49480863 49480976 -201206878 - FLAM_C SINE Alu -11 132 6 1103 237 62 33 chr2 49481698 49481847 -201206007 + MSTD LTR MaLR 1 144 -252 2183 104 7 0 chr2 49481847 49482154 -201205700 + AluSx SINE Alu 1 309 -3 1103 237 62 33 chr2 49482154 49482166 -201205688 + MSTD LTR MaLR 144 154 -242 2325 77 3 10 chr2 49482166 49482479 -201205375 + AluY SINE Alu 1 311 0 1103 237 62 33 chr2 49482479 49482620 -201205234 + MSTD LTR MaLR 154 313 -83 371 258 0 11 chr2 49482655 49482744 -201205110 - L2 LINE L2 -3 3310 3223 2128 131 3 0 chr2 49482744 49483056 -201204798 - AluSq SINE Alu 0 313 1 834 215 12 6 chr2 49483195 49483358 -201204496 - MSTD LTR MaLR 0 396 233 * 1412 226 31 33 chr2 49483352 49483711 -201204143 - MLT1F LTR MaLR -182 360 3 384 246 82 55 chr2 49483744 49483964 -201203890 - L2 LINE L2 -183 3089 2864 1851 156 0 0 chr2 49484242 49484537 -201203317 + AluSx SINE Alu 5 299 -13 455 318 67 77 chr2 49485540 49486005 -201201849 + L2 LINE L2 2812 3271 -1 2009 103 4 0 chr2 49486352 49486624 -201201230 - AluSq SINE Alu -12 301 29 1089 200 5 0 chr2 49486700 49486885 -201200969 - L1MC4a LINE L1 -1012 6796 6611 477 305 163 38 chr2 49487052 49487445 -201200409 - L1M4 LINE L1 -905 5241 4800 1350 257 132 56 chr2 49487445 49487876 -201199978 + L2 LINE L2 2035 2432 -882 2127 111 0 3 chr2 49487876 49488174 -201199680 - AluSq SINE Alu -16 297 1 1350 257 132 56 chr2 49488174 49488575 -201199279 + L2 LINE L2 2432 2930 -384 228 227 53 0 chr2 49488646 49488721 -201199133 - HsTC2 DNA Tc2 -154 1744 1666 246 147 0 0 chr2 49488721 49488755 -201199099 + Alu SINE Alu 2 35 -265 949 158 45 0 chr2 49488760 49488937 -201198917 + AluSg/x SINE Alu 115 299 -13 938 194 19 46 chr2 49488941 49489157 -201198697 - HsTC2 DNA Tc2 -209 1689 1304 351 249 189 0 chr2 49489174 49489268 -201198586 - HsTC2 DNA Tc2 -1754 144 22 180 0 0 0 chr2 49489268 49489288 -201198566 + (CAA)n Simple_repeat Simple_repeat 2 21 0 351 249 189 0 chr2 49489288 49489315 -201198539 - HsTC2 DNA Tc2 -1876 22 1 182 259 69 17 chr2 49490099 49490157 -201197697 - MER5A DNA MER1_type -6 183 123 1383 222 38 33 chr2 49490235 49490600 -201197254 - MLT1B LTR MaLR -22 368 2 265 267 8 67 chr2 49491245 49491365 -201196489 + L1MC4 LINE L1 7930 8042 0 4551 158 8 2 chr2 49491372 49492140 -201195714 + L1MA6 LINE L1 5297 6067 -233 4413 132 38 23 chr2 49492131 49492921 -201194933 + L1 LINE L1 4012 4813 -1333 * 1187 150 34 21 chr2 49493022 49493256 -201194598 + AluJo SINE Alu 63 299 -13 817 217 19 6 chr2 49493258 49493419 -201194435 - MLT1C LTR MaLR -302 165 3 1318 102 0 32 chr2 49493554 49493770 -201194084 - AluSx SINE Alu -99 213 5 398 325 247 9 chr2 49494715 49495168 -201192686 - L2 LINE L2 -1740 1574 1014 442 270 86 55 chr2 49495826 49496111 -201191743 + MLT1I LTR MaLR 69 359 -91 661 253 136 33 chr2 49496143 49496511 -201191343 - LTR16A LTR ERVL -51 406 1 279 191 43 64 chr2 49496511 49496587 -201191267 + MLT1J2 LTR MaLR 356 429 -21 784 194 80 11 chr2 49496681 49496856 -201190998 + MER5A DNA MER1_type 3 189 0 501 294 85 15 chr2 49497088 49497289 -201190565 + MIR SINE MIR 31 245 -17 1111 197 70 25 chr2 49497476 49497720 -201190134 + MLT1C LTR MaLR 213 467 0 644 262 31 11 chr2 49498457 49498633 -201189221 - MIR SINE MIR -58 150 11 321 294 184 0 chr2 49499148 49499284 -201188570 + L1ME4a LINE L1 5766 5926 -195 1998 105 7 29 chr2 49499585 49499891 -201187963 - AluSx SINE Alu -11 301 3 1688 96 20 0 chr2 49499912 49500163 -201187691 - L1MA6 LINE L1 0 6300 6045 6896 120 9 19 chr2 49500183 49501063 -201186791 - L1MA2 LINE L1 0 6304 5417 180 0 0 0 chr2 49501063 49501083 -201186771 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1783 100 46 43 chr2 49501083 49501363 -201186491 - AluSx SINE Alu -31 281 1 6896 120 9 19 chr2 49501363 49502004 -201185850 - L1MA2 LINE L1 -885 5419 4795 3488 189 10 28 chr2 49502285 49503008 -201184846 - HERVH LTR ERV1 -4988 2725 2016 2103 111 0 7 chr2 49503625 49503923 -201183931 + AluSx SINE Alu 1 296 -16 265 173 272 12 chr2 49504169 49504250 -201183604 + MIR3 SINE MIR 56 157 -51 186 43 0 0 chr2 49504303 49504326 -201183528 + (CA)n Simple_repeat Simple_repeat 2 24 0 993 190 15 30 chr2 49506496 49506696 -201181158 - MER3 DNA MER1_type -3 206 10 281 220 0 163 chr2 49507167 49507234 -201180620 + MER5A DNA MER1_type 16 50 -139 2027 77 91 0 chr2 49507234 49507520 -201180334 + AluSx SINE Alu 1 312 0 281 220 0 163 chr2 49507520 49507593 -201180261 + MER5A DNA MER1_type 50 133 -56 1550 194 72 81 chr2 49507955 49508479 -201179375 - MER39 LTR ERV1 -4 703 1 592 172 0 0 chr2 49508780 49508879 -201178975 - MER5A DNA MER1_type -8 181 83 259 250 81 73 chr2 49508795 49508931 -201178923 + MER5A DNA MER1_type 35 171 -18 * 327 49 0 0 chr2 49509244 49509285 -201178569 + (TG)n Simple_repeat Simple_repeat 1 41 0 438 322 89 0 chr2 49509939 49510119 -201177735 + L3 LINE CR1 1132 1327 -250 1985 246 39 25 chr2 49510172 49510766 -201177088 + L2 LINE L2 2149 2750 -564 261 146 24 0 chr2 49510766 49510807 -201177047 + Alu SINE Alu 1 42 -260 707 281 20 15 chr2 49512142 49512345 -201175509 + MIR SINE MIR 19 222 -40 1241 151 0 10 chr2 49513036 49513242 -201174612 + AluJb SINE Alu 86 289 -23 280 362 47 8 chr2 49513251 49513378 -201174476 + HAL1 LINE L1 1 132 -2375 554 222 34 8 chr2 49513603 49513720 -201174134 + HAL1 LINE L1 757 876 -1631 678 224 35 29 chr2 49513830 49514004 -201173850 - MER5B DNA MER1_type -2 176 2 813 137 0 36 chr2 49514015 49514154 -201173700 - FRAM SINE Alu -12 164 31 1403 142 0 0 chr2 49514167 49514402 -201173452 - AluSg/x SINE Alu 0 307 73 201 188 0 0 chr2 49514412 49514444 -201173410 + MER5B DNA MER1_type 2 33 -145 2142 105 147 8 chr2 49514444 49514797 -201173057 + MSTA LTR MaLR 1 402 -26 1282 237 14 42 chr2 49514824 49515183 -201172671 + L2 LINE L2 2206 2554 -760 2803 273 57 54 chr2 49515183 49516230 -201171624 + L1MEc LINE L1 36 1091 -5305 2315 86 0 0 chr2 49516230 49516531 -201171323 + AluSg SINE Alu 1 301 -9 2803 273 57 54 chr2 49516531 49516946 -201170908 + L1MEc LINE L1 1091 1503 -4893 2063 116 3 3 chr2 49516955 49517257 -201170597 - AluSg SINE Alu -8 302 1 1211 185 24 114 chr2 49517407 49517705 -201170149 + LTR37B LTR ERV1 3 238 -230 1882 140 0 7 chr2 49517705 49517998 -201169856 + AluSx SINE Alu 6 296 -16 1211 185 24 114 chr2 49517998 49518207 -201169647 + LTR37B LTR ERV1 238 464 -4 2959 106 7 9 chr2 49518347 49518771 -201169083 + MER34C LTR ERV1 37 459 -126 1499 71 0 76 chr2 49518772 49518996 -201168858 + LTR49 LTR ERV1 2 208 -387 3352 172 14 74 chr2 49518996 49519486 -201168368 - LTR8 LTR ERV1 0 691 258 2643 80 123 2 chr2 49519486 49519886 -201167968 + LTR7 LTR ERV1 1 448 -2 3352 172 14 74 chr2 49519886 49520128 -201167726 - LTR8 LTR ERV1 -433 258 3 4690 39 0 25 chr2 49520128 49520700 -201167154 + LTR6B LTR ERV1 1 558 0 1680 124 156 23 chr2 49520705 49520732 -201167122 + LTR49 LTR ERV1 204 226 -369 3510 84 132 120 chr2 49520732 49521050 -201166804 - LTR8A LTR ERV1 0 727 414 1955 125 6 13 chr2 49521050 49521362 -201166492 + AluSp SINE Alu 1 310 -3 3510 84 132 120 chr2 49521362 49521761 -201166093 - LTR8A LTR ERV1 -313 414 1 1680 124 156 23 chr2 49521761 49522079 -201165775 + LTR49 LTR ERV1 226 595 0 477 99 56 0 chr2 49522081 49522152 -201165702 + LTR49-int LTR ERV1 1 75 -6256 2721 94 9 83 chr2 49522152 49522249 -201165605 + MER61E LTR ERV1 1 104 -465 2055 85 13 30 chr2 49522249 49522554 -201165300 + AluY SINE Alu 1 300 -11 2721 94 9 83 chr2 49522554 49522891 -201164963 + MER61E LTR ERV1 104 403 -166 2321 185 10 71 chr2 49522891 49523299 -201164555 + LTR49-int LTR ERV1 2090 2463 -3868 2216 90 3 3 chr2 49523299 49523609 -201164245 - AluSg SINE Alu 0 310 1 2321 185 10 71 chr2 49523609 49523708 -201164146 + LTR49-int LTR ERV1 2463 2566 -3765 744 148 41 0 chr2 49523716 49523838 -201164016 - FLAM_C SINE Alu -14 129 3 852 191 0 12 chr2 49523838 49524000 -201163854 + LTR47B LTR ERVL 284 443 0 533 206 105 74 chr2 49524026 49524041 -201163813 + LOR1-int LTR ERV1 1210 1223 -3900 1935 107 43 4 chr2 49524041 49524321 -201163533 - AluSx SINE Alu -21 291 1 533 206 105 74 chr2 49524321 49524562 -201163292 + LOR1-int LTR ERV1 1223 1829 -3294 867 178 6 6 chr2 49524566 49524723 -201163131 - FRAM SINE Alu -19 157 1 665 201 0 49 chr2 49524791 49524935 -201162919 + FLAM_A SINE Alu 6 142 0 1050 147 6 0 chr2 49525006 49525169 -201162685 + AluJb SINE Alu 134 297 -15 1980 122 0 10 chr2 49525181 49525484 -201162370 + AluSx SINE Alu 12 311 -1 939 206 36 18 chr2 49525499 49525718 -201162136 + AluJb SINE Alu 88 310 -2 1103 143 62 39 chr2 49525788 49526046 -201161808 + LOR1-int LTR ERV1 4167 4430 -3690 1145 235 166 68 chr2 49526835 49527366 -201160488 + L2 LINE L2 1390 1972 -1342 2167 99 0 0 chr2 49527375 49527667 -201160187 - AluSx SINE Alu -12 300 9 2303 126 25 117 chr2 49527667 49528197 -201159657 - LTR24C LTR ERV1 -154 481 1 283 229 48 60 chr2 49528220 49528303 -201159551 - MER91C DNA MER1_type -28 112 31 462 289 176 11 chr2 49528918 49529105 -201158749 - MIR SINE MIR 0 262 45 390 129 0 0 chr2 49529502 49529564 -201158290 + (T)n Simple_repeat Simple_repeat 1 62 0 1313 144 0 23 chr2 49529586 49529801 -201158053 - AluJb SINE Alu -102 210 1 4593 143 14 6 chr2 49529880 49530596 -201157258 - MER72 LTR ERV1 0 722 1 226 347 67 0 chr2 49531720 49531795 -201156059 + L3b LINE CR1 1305 1384 -199 1617 181 0 20 chr2 49532031 49532335 -201155519 - AluJo SINE Alu -14 298 1 380 215 54 67 chr2 49532457 49532606 -201155248 - MLT1J LTR MaLR -49 462 316 270 176 59 59 chr2 49532748 49532816 -201155038 - MLT1J LTR MaLR -342 169 102 1399 167 48 167 chr2 49532818 49533360 -201154494 + LTR49-int LTR ERV1 4256 4861 -1470 784 152 8 23 chr2 49533360 49533492 -201154362 + AluJo/FLAM SINE Alu 2 131 -171 1960 113 20 7 chr2 49533494 49533796 -201154058 + AluSg SINE Alu 3 308 -2 1399 167 48 167 chr2 49533796 49533873 -201153981 + LTR49-int LTR ERV1 4719 4804 -1527 1810 117 4 0 chr2 49533975 49534239 -201153615 + AluSx SINE Alu 45 309 -3 226 258 99 92 chr2 49534482 49534765 -201153089 + LTR38 LTR ERV1 256 540 -16 1255 139 95 98 chr2 49534775 49534822 -201153032 + MER34C LTR ERV1 262 308 -277 1999 104 4 4 chr2 49534822 49535101 -201152753 + AluSq SINE Alu 16 294 -19 1255 139 95 98 chr2 49535101 49535370 -201152484 + MER34C LTR ERV1 308 577 -8 971 170 152 0 chr2 49535374 49535598 -201152256 + MER33 DNA MER1_type 2 259 -65 268 115 0 19 chr2 49535576 49535628 -201152226 - Alu SINE Alu 0 301 251 * 314 151 0 0 chr2 49535628 49535681 -201152173 + LTR24C LTR ERV1 429 481 -154 2162 105 0 0 chr2 49535681 49535976 -201151878 + AluSx SINE Alu 9 303 -9 1128 233 165 70 chr2 49535985 49536517 -201151337 - L2 LINE L2 -1342 1972 1390 2108 113 10 3 chr2 49537302 49537611 -201150243 - AluSx SINE Alu -1 311 1 1201 184 91 85 chr2 49538189 49538564 -201149290 - LTR8A LTR ERV1 0 727 351 1439 138 3 97 chr2 49538564 49538875 -201148979 + AluJo SINE Alu 1 282 -30 198 103 0 0 chr2 49538879 49538908 -201148946 + (GA)n Simple_repeat Simple_repeat 2 30 0 1838 184 22 77 chr2 49538935 49539101 -201148753 - MER31B LTR ERV1 -39 427 253 1973 99 53 0 chr2 49539101 49539383 -201148471 + AluSq SINE Alu 1 297 -16 1838 184 22 77 chr2 49539383 49539623 -201148231 - MER31B LTR ERV1 -213 253 46 2208 87 0 22 chr2 49539623 49539934 -201147920 + AluSx SINE Alu 3 306 -6 1838 184 22 77 chr2 49539934 49539978 -201147876 - MER31B LTR ERV1 -420 46 1 1203 178 42 0 chr2 49539979 49540215 -201147639 + L1MD1 LINE L1 5996 6241 -1 580 164 40 139 chr2 49540217 49540491 -201147363 - LTR37B LTR ERV1 -126 342 96 2247 93 0 13 chr2 49540556 49540868 -201146986 + AluY SINE Alu 1 308 -3 50 46 0 46 chr2 49540929 49541059 -201146795 + AT_rich Low_complexity Low_complexity 1 124 0 2276 84 7 0 chr2 49541794 49542102 -201145752 + AluY SINE Alu 1 310 -1 1059 209 94 4 chr2 49542457 49542734 -201145120 - LTR37A LTR ERV1 0 426 125 817 109 0 31 chr2 49542993 49543115 -201144739 + AluJo/FLAM SINE Alu 9 127 -180 1445 146 73 11 chr2 49543115 49543390 -201144464 - AluSx SINE Alu -20 292 1 22 0 0 0 chr2 49543396 49543418 -201144436 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 49543574 49543597 -201144257 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1264 138 0 5 chr2 49543600 49543789 -201144065 - AluJo SINE Alu -33 279 92 433 152 33 0 chr2 49543860 49543952 -201143902 - LTR37A LTR ERV1 0 426 332 489 173 25 0 chr2 49543952 49544033 -201143821 - AluJo SINE Alu -225 87 5 321 158 26 53 chr2 49544083 49544159 -201143695 - LTR41 LTR ERVL -6 767 694 1561 86 9 0 chr2 49544159 49544369 -201143485 + AluSq SINE Alu 1 212 -101 231 289 0 22 chr2 49544543 49544633 -201143221 + C-rich Low_complexity Low_complexity 1 88 0 2318 133 8 16 chr2 49545445 49545812 -201142042 + MLT1A1 LTR MaLR 1 364 -1 373 290 130 0 chr2 49545915 49546046 -201141808 + MIR SINE MIR 45 192 -70 1128 257 139 20 chr2 49546627 49546883 -201140971 - MLT1C LTR MaLR -10 457 233 2151 111 0 0 chr2 49546883 49547180 -201140674 - AluSx SINE Alu -12 300 4 1128 257 139 20 chr2 49547180 49547327 -201140527 - MLT1C LTR MaLR -234 233 6 180 0 0 0 chr2 49547933 49547953 -201139901 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 253 267 38 19 chr2 49547985 49548090 -201139764 - L1MC4a LINE L1 -1635 6173 6067 547 264 77 52 chr2 49548166 49548492 -201139362 - L1MC4a LINE L1 -1856 5952 5619 241 312 49 100 chr2 49549139 49549568 -201138286 - LTR67 LTR ERVL -46 511 105 196 122 0 73 chr2 49550251 49550292 -201137562 + L2 LINE L2 3255 3292 -21 1744 163 91 29 chr2 49550362 49550895 -201136959 - LTR18B LTR ERVL 0 614 1 190 167 375 0 chr2 49551092 49551164 -201136690 - MER5A DNA MER1_type -84 105 7 552 198 105 43 chr2 49551176 49551338 -201136516 - MER5B DNA MER1_type 0 178 7 450 256 51 7 chr2 49552030 49552167 -201135687 - MER103 DNA DNA -22 144 2 858 266 63 0 chr2 49552433 49552655 -201135199 + MIR SINE MIR 17 252 -10 1749 131 7 56 chr2 49553153 49553459 -201134395 - AluJo SINE Alu -21 291 1 241 286 9 76 chr2 49554257 49554362 -201133492 - MIR SINE MIR -71 137 40 425 252 54 43 chr2 49554700 49555105 -201132749 - LTR48 LTR ERV1 -141 646 1 1651 120 8 16 chr2 49555696 49555954 -201131900 - AluSx SINE Alu -11 301 46 881 136 35 61 chr2 49556255 49556453 -201131401 + MER31-int LTR ERV1 3544 3736 -2862 1236 206 66 39 chr2 49556526 49557068 -201130786 + MER31-int LTR ERV1 2478 2930 -2006 1136 151 0 0 chr2 49557078 49557257 -201130597 - AluJb SINE Alu 0 312 134 255 215 0 15 chr2 49557259 49557324 -201130530 + MER31-int LTR ERV1 2917 2980 -1956 948 237 74 63 chr2 49557401 49557623 -201130231 + MER31-int LTR ERV1 4294 4524 -1807 1613 166 18 18 chr2 49557623 49557973 -201129881 - AluSx SINE Alu 0 350 1 948 237 74 63 chr2 49557973 49558129 -201129725 + MER31-int LTR ERV1 4524 4677 -1654 1910 90 29 22 chr2 49558131 49558408 -201129446 + AluSx SINE Alu 3 281 -31 324 0 0 0 chr2 49558408 49558444 -201129410 + (CA)n Simple_repeat Simple_repeat 1 36 0 628 96 0 0 chr2 49558444 49558527 -201129327 - MER51B LTR ERV1 -294 83 1 1029 179 107 36 chr2 49558527 49558779 -201129075 + MER31-int LTR ERV1 599 868 -4068 280 229 108 0 chr2 49558829 49558912 -201128942 + MER67D LTR ERV1 120 211 -303 690 195 53 40 chr2 49558985 49559252 -201128602 + MER31-int LTR ERV1 891 1194 -3742 * 2700 203 50 48 chr2 49559221 49559907 -201127947 + MER31-int LTR ERV1 3625 4311 -625 322 89 0 0 chr2 49559907 49559952 -201127902 + MER57A LTR ERV1 1 45 -358 2207 110 0 0 chr2 49560429 49560738 -201127116 - AluSx SINE Alu -3 309 1 936 223 66 0 chr2 49560933 49561144 -201126710 - MIR SINE MIR -36 226 2 470 283 71 10 chr2 49561418 49561607 -201126247 - MIR SINE MIR -47 215 15 2515 56 0 0 chr2 49561716 49562019 -201125835 - AluY SINE Alu -8 303 1 1499 223 42 23 chr2 49562528 49562992 -201124862 + MER39 LTR ERV1 4 707 0 2238 85 3 3 chr2 49563024 49563318 -201124536 + AluSx SINE Alu 1 294 -18 310 320 78 41 chr2 49563319 49563563 -201124291 - L2 LINE L2 -14 3258 3006 491 271 193 62 chr2 49563566 49563801 -201124053 - L2 LINE L2 -2 3311 3108 2165 86 3 46 chr2 49563801 49564125 -201123729 + AluSg SINE Alu 1 310 0 491 271 193 62 chr2 49564125 49564262 -201123592 - L2 LINE L2 -205 3108 2890 310 263 181 34 chr2 49564383 49564588 -201123266 - L2 LINE L2 -444 2870 2636 229 128 43 43 chr2 49564593 49564640 -201123214 - LTR45 LTR ERV1 0 525 479 2347 64 0 7 chr2 49564643 49564938 -201122916 + AluY SINE Alu 2 294 -17 1101 182 14 9 chr2 49564947 49565187 -201122667 + AluJo SINE Alu 72 312 0 2456 156 31 7 chr2 49565187 49565611 -201122243 - LTR45 LTR ERV1 -41 484 51 570 173 29 0 chr2 49565637 49565741 -201122113 - L1ME LINE L1 -553 5613 5507 1837 229 70 10 chr2 49565741 49566252 -201121602 - LTR48B LTR ERV1 0 644 58 1402 159 0 64 chr2 49566256 49566419 -201121435 - AluJb SINE Alu -25 287 148 297 0 0 0 chr2 49566419 49566452 -201121402 + (TA)n Simple_repeat Simple_repeat 2 34 0 1402 159 0 64 chr2 49566452 49566571 -201121283 - AluJb SINE Alu -164 148 23 2616 149 34 42 chr2 49566746 49567435 -201120419 - LTR48B-int LTR ERV1 -156 6175 5447 2023 121 0 3 chr2 49567435 49567732 -201120122 - AluSx SINE Alu -16 296 1 2616 149 34 42 chr2 49567732 49567902 -201119952 - LTR48B-int LTR ERV1 -884 5447 5277 2002 117 7 10 chr2 49568183 49568483 -201119371 - AluSx SINE Alu -13 299 1 1671 111 28 0 chr2 49568526 49568778 -201119076 - MER34C LTR ERV1 -320 265 7 2085 98 3 3 chr2 49569413 49569710 -201118144 - AluY SINE Alu -14 297 1 682 232 18 4 chr2 49569795 49569984 -201117870 + MLT1A1 LTR MaLR 179 396 0 237 241 17 0 chr2 49569984 49570036 -201117818 - MLT1H LTR MaLR -43 506 454 1069 181 0 9 chr2 49570063 49570279 -201117575 - AluY SINE Alu -15 296 83 451 102 0 0 chr2 49570279 49570338 -201117516 - AluSp/q SINE Alu -63 250 192 917 117 0 7 chr2 49570340 49570477 -201117377 - AluJb SINE Alu -176 136 1 605 234 50 116 chr2 49570483 49570803 -201117051 - MLT1H LTR MaLR -143 406 108 196 224 0 41 chr2 49570878 49570927 -201116927 - L2 LINE L2 -37 3235 3189 2129 105 3 0 chr2 49571047 49571353 -201116501 + AluSx SINE Alu 1 307 -5 569 281 216 36 chr2 49571388 49571686 -201116168 - L2 LINE L2 -297 3016 2773 1656 159 41 0 chr2 49571686 49571981 -201115873 + AluJo SINE Alu 1 307 -5 1790 112 87 17 chr2 49571982 49572269 -201115585 + AluSq SINE Alu 1 307 -6 569 281 216 36 chr2 49572269 49572534 -201115320 - L2 LINE L2 -539 2774 2354 1356 173 0 0 chr2 49572540 49572766 -201115088 + AluJb SINE Alu 1 226 -86 1032 135 0 6 chr2 49572866 49573022 -201114832 - AluJo SINE Alu -66 246 92 433 152 33 0 chr2 49573093 49573185 -201114669 - LTR37A LTR ERV1 0 426 332 489 173 25 0 chr2 49573185 49573266 -201114588 - AluJo SINE Alu -225 87 5 330 126 11 230 chr2 49573316 49573392 -201114462 - LTR41 LTR ERVL -6 767 748 2134 118 0 6 chr2 49573392 49573707 -201114147 + AluSq SINE Alu 1 313 0 330 126 11 230 chr2 49573707 49573804 -201114050 - LTR41 LTR ERVL -25 748 632 1881 87 153 6 chr2 49573832 49574170 -201113684 + LTR7 LTR ERV1 3 450 0 1340 221 98 106 chr2 49574176 49574818 -201113036 - LTR41 LTR ERVL -136 637 1 1497 81 10 15 chr2 49574867 49575065 -201112789 - MER107 DNA MER1_type 0 197 1 2018 93 9 78 chr2 49575112 49575446 -201112408 + AluSx SINE Alu 1 311 -1 279 214 68 60 chr2 49575841 49575958 -201111896 - LTR49-int LTR ERV1 -3083 1853 1736 1575 161 21 31 chr2 49576004 49576295 -201111559 - AluJb SINE Alu -24 288 1 2228 103 10 0 chr2 49577148 49577458 -201110396 + AluSq SINE Alu 1 313 0 3713 123 74 30 chr2 49577460 49578191 -201109663 - LTR49-int LTR ERV1 -1495 4451 3292 977 193 36 22 chr2 49578262 49578485 -201109369 - AluJb SINE Alu -2 310 85 2058 131 0 6 chr2 49578495 49578808 -201109046 - AluSx SINE Alu -1 311 1 1050 147 6 0 chr2 49578812 49578975 -201108879 - AluJb SINE Alu -15 297 134 665 201 0 49 chr2 49579046 49579190 -201108664 - FLAM_A SINE Alu 0 142 6 867 178 6 6 chr2 49579258 49579415 -201108439 + FRAM SINE Alu 1 157 -19 533 206 105 74 chr2 49579419 49579660 -201108194 - LTR49-int LTR ERV1 -3294 1829 1597 1935 107 43 4 chr2 49579660 49579940 -201107914 + AluSx SINE Alu 1 291 -21 533 206 105 74 chr2 49579940 49579955 -201107899 - LTR49-int LTR ERV1 -3526 1597 1210 852 191 0 12 chr2 49579981 49580143 -201107711 - LTR47B LTR ERVL 0 443 284 744 148 41 0 chr2 49580143 49580265 -201107589 + FLAM_C SINE Alu 3 129 -14 2321 185 10 71 chr2 49580273 49580372 -201107482 - LTR49-int LTR ERV1 -3765 2566 2463 2251 91 3 0 chr2 49580372 49580681 -201107173 + AluSg SINE Alu 1 310 0 2321 185 10 71 chr2 49580681 49581089 -201106765 - LTR49-int LTR ERV1 -3868 2463 2090 2721 94 9 83 chr2 49581089 49581426 -201106428 - MER61E LTR ERV1 -166 403 104 2273 77 0 29 chr2 49581426 49581739 -201106115 - AluY SINE Alu -7 304 1 2721 94 9 83 chr2 49581739 49581836 -201106018 - MER61E LTR ERV1 -465 104 1 477 99 56 0 chr2 49581836 49581907 -201105947 - LTR49-int LTR ERV1 -6256 75 1 1889 109 149 23 chr2 49581909 49582229 -201105625 - LTR49 LTR ERV1 0 595 226 3552 83 131 120 chr2 49582229 49582628 -201105226 + LTR8A LTR ERV1 1 413 -314 1955 125 6 13 chr2 49582628 49582940 -201104914 - AluSp SINE Alu -3 310 1 3552 83 131 120 chr2 49582940 49583259 -201104595 + LTR8A LTR ERV1 413 727 0 1889 109 149 23 chr2 49583259 49583286 -201104568 - LTR49 LTR ERV1 -369 226 204 4690 39 0 25 chr2 49583291 49583863 -201103991 - LTR6B LTR ERV1 0 558 1 3352 172 14 74 chr2 49583863 49584105 -201103749 + LTR8 LTR ERV1 3 258 -433 2673 80 123 0 chr2 49584105 49584504 -201103350 - LTR7 LTR ERV1 -2 448 1 3352 172 14 74 chr2 49584504 49584994 -201102860 + LTR8 LTR ERV1 258 691 0 1499 71 0 76 chr2 49584994 49585218 -201102636 - LTR49 LTR ERV1 -387 208 2 2959 106 7 9 chr2 49585219 49585643 -201102211 - MER34C LTR ERV1 -126 459 37 1197 187 24 114 chr2 49585783 49585992 -201101862 - LTR37B LTR ERV1 -4 464 238 1882 140 0 7 chr2 49585992 49586285 -201101569 - AluSx SINE Alu -16 296 6 1197 187 24 114 chr2 49586285 49586583 -201101271 - LTR37B LTR ERV1 -230 238 3 690 209 31 0 chr2 49586734 49586863 -201100991 + FLAM_A SINE Alu 1 133 0 1314 124 212 39 chr2 49586909 49587168 -201100686 - AluSx SINE Alu -8 304 1 2404 61 0 0 chr2 49587337 49587634 -201100220 + AluY SINE Alu 1 297 -14 1671 111 28 0 chr2 49588267 49588519 -201099335 + MER34C LTR ERV1 7 265 -320 2002 117 7 10 chr2 49588562 49588862 -201098992 + AluSx SINE Alu 1 299 -13 2135 120 3 0 chr2 49588960 49589268 -201098586 + AluSx SINE Alu 1 309 -3 226 258 99 92 chr2 49589511 49589794 -201098060 + LTR38 LTR ERV1 256 540 -16 1241 142 95 98 chr2 49589804 49589851 -201098003 + MER34C LTR ERV1 262 308 -277 1999 104 4 4 chr2 49589851 49590130 -201097724 + AluSq SINE Alu 16 294 -19 1241 142 95 98 chr2 49590130 49590399 -201097455 + MER34C LTR ERV1 308 577 -8 1040 157 61 44 chr2 49590403 49590604 -201097250 + MER33 DNA MER1_type 2 209 -2376 1996 110 0 20 chr2 49590604 49590903 -201096951 - AluSx SINE Alu -9 303 11 1040 157 61 44 chr2 49590903 49590930 -201096924 + MER33 DNA MER1_type 209 234 -90 1840 141 0 17 chr2 49590932 49591223 -201096631 + AluSq SINE Alu 2 287 -26 257 106 277 0 chr2 49591552 49591599 -201096255 + L2 LINE L2 3232 3291 -22 402 207 0 0 chr2 49592003 49592090 -201095764 + MER33 DNA MER1_type 277 363 0 353 264 29 86 chr2 49592282 49592456 -201095398 + MIR3 SINE MIR 30 193 -15 1560 168 8 0 chr2 49592457 49592719 -201095135 - AluJb SINE Alu 0 312 49 1709 122 6 81 chr2 49592831 49593152 -201094702 + AluSx SINE Alu 1 297 -15 780 169 0 0 chr2 49593161 49593279 -201094575 + FLAM_C SINE Alu 1 118 -15 38 0 0 0 chr2 49593284 49593322 -201094532 + AT_rich Low_complexity Low_complexity 1 38 0 793 261 136 42 chr2 49593495 49593901 -201093953 - L2 LINE L2 -3 3269 2826 764 194 88 6 chr2 49594984 49595144 -201092710 + MLT1B LTR MaLR 1 173 -217 1621 169 11 7 chr2 49595147 49595426 -201092428 + AluJo SINE Alu 1 280 -32 574 245 8 118 chr2 49595460 49595705 -201092149 + MLT1B LTR MaLR 157 374 0 1677 178 21 3 chr2 49595754 49596040 -201091814 + MLT2B1 LTR ERVL 3 293 -227 225 374 107 8 chr2 49596633 49596764 -201091090 - L2 LINE L2 -33 3239 3096 508 186 118 0 chr2 49596923 49597025 -201090829 + MER21B LTR ERV1 327 440 -423 2082 132 0 0 chr2 49597138 49597441 -201090413 + AluJb SINE Alu 1 303 -9 1618 141 3 75 chr2 49597466 49597785 -201090069 + AluJo SINE Alu 1 296 -16 35 0 0 0 chr2 49597788 49597823 -201090031 + AT_rich Low_complexity Low_complexity 1 35 0 2001 112 28 0 chr2 49597920 49598207 -201089647 + AluSg SINE Alu 1 295 -15 1507 204 3 41 chr2 49598627 49598762 -201089092 + AluJo SINE Alu 1 140 -162 1898 109 13 35 chr2 49598762 49599073 -201088781 + AluSq SINE Alu 1 304 -9 1507 204 3 41 chr2 49599073 49599251 -201088603 + AluJo SINE Alu 140 302 0 578 251 29 17 chr2 49599259 49599434 -201088420 - LTR41 LTR ERVL -590 183 7 367 229 0 86 chr2 49599443 49599473 -201088381 + L1ME2 LINE L1 729 760 -5310 1941 107 69 3 chr2 49599473 49599764 -201088090 + AluSx SINE Alu 1 310 -2 367 229 0 86 chr2 49599764 49599873 -201087981 + L1ME2 LINE L1 760 856 -5214 807 229 72 8 chr2 49599892 49600128 -201087726 + L1ME2 LINE L1 4778 5028 -1052 776 151 0 32 chr2 49600149 49600275 -201087579 + FLAM_C SINE Alu 2 123 -20 2178 170 37 121 chr2 49600287 49600371 -201087483 + L1ME2 LINE L1 5049 5138 -960 1583 175 0 34 chr2 49600371 49600497 -201087357 + AluJo SINE Alu 1 130 -182 2217 110 0 0 chr2 49600497 49600805 -201087049 - AluSg SINE Alu -2 308 1 1583 175 0 34 chr2 49600805 49600975 -201086879 + AluJo SINE Alu 130 287 -25 2178 170 37 121 chr2 49600975 49601198 -201086656 + L1ME2 LINE L1 5138 5378 -720 1490 163 58 4 chr2 49601198 49601474 -201086380 + AluSx SINE Alu 1 291 -21 2178 170 37 121 chr2 49601474 49601940 -201085914 + L1ME2 LINE L1 5378 5756 -342 341 172 22 149 chr2 49601982 49602007 -201085847 + L1ME2 LINE L1 5973 6000 -98 8246 56 0 19 chr2 49602007 49603033 -201084821 + LTR13 LTR ERVK 1 1007 0 341 172 22 149 chr2 49603033 49603079 -201084775 + L1ME2 LINE L1 6000 6022 -76 1585 182 10 10 chr2 49603079 49603376 -201084478 + AluJo SINE Alu 1 297 -15 341 172 22 149 chr2 49603376 49603437 -201084417 + L1ME2 LINE L1 6022 6089 -9 1706 165 3 16 chr2 49603440 49603743 -201084111 - AluJb SINE Alu -10 302 4 216 293 71 38 chr2 49603790 49604002 -201083852 - L2 LINE L2 -1637 1677 1459 756 188 0 0 chr2 49604002 49604119 -201083735 + FLAM_C SINE Alu 2 118 -25 2230 92 13 3 chr2 49604271 49604576 -201083278 + AluSx SINE Alu 1 308 -4 422 352 53 11 chr2 49605058 49605322 -201082532 + L1MC4a LINE L1 5594 5868 -1940 807 175 13 0 chr2 49605376 49605530 -201082324 + FRAM SINE Alu 1 40 0 1580 181 3 17 chr2 49606032 49606331 -201081523 - AluJb SINE Alu -17 295 1 2210 87 3 13 chr2 49606815 49607127 -201080727 - AluSg SINE Alu -1 309 1 1626 166 62 0 chr2 49607130 49607420 -201080434 - AluJo SINE Alu -4 308 1 2420 15 0 0 chr2 49607578 49607845 -201080009 - SVA Other Other -2 1384 1118 1885 117 36 0 chr2 49608002 49608282 -201079572 + AluSx SINE Alu 1 290 -22 1657 165 0 43 chr2 49608282 49608604 -201079250 + AluJo SINE Alu 1 308 -4 492 309 79 88 chr2 49609020 49609355 -201078499 + L2 LINE L2 2481 2817 -455 778 189 70 50 chr2 49609355 49609415 -201078439 - MER3 DNA MER1_type 0 209 152 1779 158 3 0 chr2 49609415 49609699 -201078155 - AluJb SINE Alu -27 285 1 778 189 70 50 chr2 49609699 49609839 -201078015 - MER3 DNA MER1_type -57 152 5 492 309 79 88 chr2 49609839 49610186 -201077668 + L2 LINE L2 2817 3226 -46 904 289 87 32 chr2 49610267 49610706 -201077148 - MLT1K LTR MaLR 0 588 126 946 162 30 6 chr2 49611052 49611219 -201076635 + AluSx SINE Alu 1 171 -141 806 148 15 0 chr2 49611306 49611441 -201076413 + AluSx SINE Alu 173 309 -3 1493 178 36 48 chr2 49611541 49611850 -201076004 + AluJo SINE Alu 1 305 -7 2945 196 55 63 chr2 49611850 49612064 -201075790 - L1ME1 LINE L1 -6 6160 5946 1446 171 0 98 chr2 49612064 49612391 -201075463 - AluJb SINE Alu -7 295 1 2945 196 55 63 chr2 49612391 49612666 -201075188 - L1ME1 LINE L1 -220 5946 5670 689 195 0 39 chr2 49612666 49612794 -201075060 - FLAM_A SINE Alu -10 123 1 2945 196 55 63 chr2 49612794 49613078 -201074776 - L1ME1 LINE L1 -496 5670 5391 1727 179 3 3 chr2 49613078 49613375 -201074479 + AluJb SINE Alu 1 297 -15 2945 196 55 63 chr2 49613375 49613437 -201074417 - L1ME1 LINE L1 -775 5391 5330 354 115 16 16 chr2 49613440 49613501 -201074353 - AluJb SINE Alu -10 292 232 4066 108 9 0 chr2 49613506 49614055 -201073799 - MER41A LTR ERV1 0 554 1 3496 109 14 2 chr2 49614056 49614550 -201073304 - MER84 LTR ERVI -5 502 3 1199 189 77 0 chr2 49614552 49614774 -201073080 - AluJb SINE Alu -73 239 1 2731 185 40 37 chr2 49614776 49615266 -201072588 - L1ME1 LINE L1 -817 5329 4835 2082 241 52 48 chr2 49615266 49615530 -201072324 - LTR26 LTR ERV1 0 603 341 1943 126 0 0 chr2 49615530 49615838 -201072016 + AluSx SINE Alu 7 314 0 2082 241 52 48 chr2 49615838 49616173 -201071681 - LTR26 LTR ERV1 -262 341 1 2731 185 40 37 chr2 49616173 49616353 -201071501 - L1ME1 LINE L1 -1311 4835 4657 819 151 0 14 chr2 49616357 49616503 -201071351 - AluSg/x SINE Alu -1 311 168 2122 97 10 0 chr2 49616505 49616805 -201071049 - AluSp SINE Alu -10 303 1 1803 144 3 50 chr2 49616805 49617124 -201070730 - AluSx SINE Alu -8 304 1 2192 106 0 28 chr2 49617427 49617749 -201070105 + AluSq SINE Alu 1 313 0 2077 113 0 0 chr2 49617935 49618235 -201069619 - AluY SINE Alu -11 300 1 2642 164 29 70 chr2 49618367 49618604 -201069250 + LTR49 LTR ERV1 1 246 -349 3498 87 4 0 chr2 49618604 49619073 -201068781 + L1PA10 LINE L1 5694 6164 -4 2642 164 29 70 chr2 49619073 49619432 -201068422 + LTR49 LTR ERV1 246 572 -23 974 256 73 0 chr2 49619450 49619684 -201068170 + MIR SINE MIR 12 262 0 9929 180 48 66 chr2 49619848 49622017 -201065837 + Tigger5 DNA MER2_type 1 2124 -199 2110 125 3 0 chr2 49622017 49622322 -201065532 + AluSx SINE Alu 1 306 -6 9929 180 48 66 chr2 49622322 49622518 -201065336 + Tigger5 DNA MER2_type 2124 2322 -1 1160 145 5 21 chr2 49622995 49623188 -201064666 - LTR24B LTR ERV1 -4 572 383 876 182 48 0 chr2 49623188 49623353 -201064501 - FRAM SINE Alu -4 172 1 2253 125 53 13 chr2 49623353 49623728 -201064126 - LTR24B LTR ERV1 -186 390 1 2108 121 3 0 chr2 49623764 49624061 -201063793 - AluSq SINE Alu -11 302 5 1532 196 77 91 chr2 49624202 49624811 -201063043 + LTR49 LTR ERV1 1 561 -4 2919 160 84 40 chr2 49624835 49624851 -201063003 + MER4D LTR ERV1 310 324 -579 2154 132 3 0 chr2 49624851 49625162 -201062692 - AluSx SINE Alu 0 312 1 2919 160 84 40 chr2 49625162 49625371 -201062483 + MER4D LTR ERV1 324 522 -381 2202 163 55 36 chr2 49625371 49625410 -201062444 - MSTB LTR MaLR 0 426 389 2130 109 0 0 chr2 49625410 49625732 -201062122 + AluSx SINE Alu 1 322 0 2202 163 55 36 chr2 49625732 49626109 -201061745 - MSTB LTR MaLR -37 389 1 2919 160 84 40 chr2 49626109 49626451 -201061403 + MER4D LTR ERV1 522 903 0 1590 156 96 45 chr2 49626465 49626512 -201061342 + LTR49 LTR ERV1 1 44 -551 2294 78 3 3 chr2 49626512 49626818 -201061036 - AluSq SINE Alu -7 306 1 1590 156 96 45 chr2 49626818 49627104 -201060750 + LTR49 LTR ERV1 44 351 -244 641 205 26 19 chr2 49627072 49627228 -201060626 + LTR29 LTR ERV1 394 550 -72 * 2395 108 101 5 chr2 49627228 49627626 -201060228 + LTR23 LTR ERV1 1 436 -1 3541 96 56 96 chr2 49628009 49628657 -201059197 + LTR29 LTR ERV1 1 622 0 953 205 0 0 chr2 49628691 49628857 -201058997 + FRAM SINE Alu 1 166 0 652 173 0 6 chr2 49629276 49629530 -201058324 + AluJ SINE Alu 1 303 -9 463 175 21 21 chr2 49629604 49629701 -201058153 + LTR49-int LTR ERV1 1558 1654 -4677 1770 142 34 7 chr2 49629751 49630047 -201057807 + LTR28 LTR ERV1 1 304 -716 347 280 13 47 chr2 49630081 49630231 -201057623 + LTR28 LTR ERV1 546 690 -330 263 136 85 34 chr2 49630251 49630310 -201057544 + LTR27 LTR ERV1 575 636 0 963 149 11 37 chr2 49630321 49630414 -201057440 + AluJo SINE Alu 49 136 -176 585 0 0 0 chr2 49630414 49630479 -201057375 + (TA)n Simple_repeat Simple_repeat 2 66 0 963 149 11 37 chr2 49630479 49630573 -201057281 + AluJo SINE Alu 136 231 -81 720 124 26 0 chr2 49630576 49630689 -201057165 + FRAM SINE Alu 58 173 -3 4059 200 72 28 chr2 49630736 49631822 -201056032 + LTR49-int LTR ERV1 746 2674 -3657 1855 141 47 0 chr2 49631835 49632133 -201055721 + AluSx SINE Alu 1 312 0 492 125 231 19 chr2 49632152 49632256 -201055598 + LTR49-int LTR ERV1 4210 4335 -1996 2503 117 67 8 chr2 49632256 49632657 -201055197 + MSTA LTR MaLR 1 425 -3 9273 167 23 17 chr2 49632657 49633137 -201054717 + MSTA-int LTR MaLR 7 483 -1168 1346 178 77 18 chr2 49633137 49633423 -201054431 + AluJb SINE Alu 5 307 -5 9273 167 23 17 chr2 49633423 49633490 -201054364 + MSTA-int LTR MaLR 483 548 -1103 2143 126 0 0 chr2 49633490 49633799 -201054055 + AluSg SINE Alu 1 309 -1 9273 167 23 17 chr2 49633799 49634818 -201053036 + MSTA-int LTR MaLR 548 1583 -68 305 143 0 0 chr2 49634818 49634860 -201052994 - AluSg/x SINE Alu -132 168 127 857 123 0 36 chr2 49634860 49634998 -201052856 - AluJo/FLAM SINE Alu -169 133 1 3948 160 30 68 chr2 49634999 49635637 -201052217 + LTR49-int LTR ERV1 3857 4518 -605 1729 158 9 38 chr2 49635637 49635954 -201051900 - AluJo SINE Alu -4 308 1 3948 160 30 68 chr2 49635954 49636136 -201051718 + LTR49-int LTR ERV1 4518 4207 -916 1691 194 0 0 chr2 49636136 49636430 -201051424 + AluJb SINE Alu 1 294 -18 3948 160 30 68 chr2 49636430 49636545 -201051309 + LTR49-int LTR ERV1 4206 4324 -799 1934 147 0 0 chr2 49636547 49636833 -201051021 - AluSx SINE Alu -26 286 1 1846 100 50 4 chr2 49636834 49637113 -201050741 + LTR23 LTR ERV1 122 413 -24 1986 115 3 7 chr2 49637116 49637411 -201050443 + AluSx SINE Alu 1 294 -18 245 128 0 0 chr2 49637444 49637483 -201050371 + LTR23 LTR ERV1 399 437 0 263 161 194 0 chr2 49637486 49637548 -201050306 + LTR49 LTR ERV1 517 590 -5 1674 141 27 48 chr2 49637552 49637885 -201049969 - MER50 LTR ERV1 -30 704 379 1385 99 16 0 chr2 49637863 49638054 -201049800 - MER50 LTR ERV1 -486 248 55 * 1170 190 82 18 chr2 49638263 49638542 -201049312 + MER90 LTR ERV1 72 368 -246 2401 74 3 0 chr2 49638547 49638859 -201048995 + AluSp SINE Alu 1 313 0 799 165 91 51 chr2 49638862 49639038 -201048816 + AluJb SINE Alu 129 311 -1 818 207 7 120 chr2 49639064 49639235 -201048619 + AluY SINE Alu 13 143 -168 180 0 0 0 chr2 49639235 49639255 -201048599 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 818 207 7 120 chr2 49639255 49639358 -201048496 + AluY SINE Alu 143 256 -55 1632 147 0 39 chr2 49639358 49639644 -201048210 - AluJb SINE Alu -37 275 1 556 183 43 0 chr2 49639647 49639762 -201048092 + MER90 LTR ERV1 361 480 -134 803 179 0 0 chr2 49640316 49640456 -201047398 + FLAM_C SINE Alu 1 140 -3 1483 156 9 107 chr2 49640591 49640749 -201047105 - AluJo SINE Alu -8 294 183 1747 178 0 3 chr2 49640749 49641053 -201046801 - AluJb SINE Alu -9 303 1 1483 156 9 107 chr2 49641053 49641220 -201046634 - AluJo SINE Alu -119 183 1 1417 151 3 151 chr2 49642160 49642336 -201045518 - AluJb SINE Alu -3 299 99 441 0 0 0 chr2 49642336 49642385 -201045469 + (TA)n Simple_repeat Simple_repeat 2 50 0 2090 118 0 10 chr2 49642385 49642689 -201045165 - AluSx SINE Alu -11 301 1 1417 151 3 151 chr2 49642689 49642708 -201045146 - AluJb SINE Alu -202 100 80 2334 107 0 0 chr2 49642708 49643018 -201044836 - AluSx SINE Alu -2 310 1 1417 151 3 151 chr2 49643018 49643036 -201044818 - AluJb SINE Alu -222 80 61 2213 95 0 0 chr2 49643036 49643330 -201044524 - AluSg SINE Alu -16 294 1 1417 151 3 151 chr2 49643330 49643464 -201044390 - AluJb SINE Alu -241 61 1 1818 131 39 3 chr2 49643701 49643984 -201043870 - AluSx SINE Alu -19 293 1 546 232 40 57 chr2 49644168 49644345 -201043509 + MER5B DNA MER1_type 2 175 -3 1222 144 161 70 chr2 49644424 49644709 -201043145 + AluJo SINE Alu 1 311 -1 440 197 0 0 chr2 49644711 49644782 -201043072 + AluSc SINE Alu 128 198 -111 736 100 0 0 chr2 49644782 49644882 -201042972 + MER34B LTR ERV1 302 401 -164 768 109 0 0 chr2 49644883 49644984 -201042870 + AluSq/x SINE Alu 6 106 -207 1675 91 0 0 chr2 49645077 49645298 -201042556 - MER34B LTR ERV1 0 565 345 1966 129 7 3 chr2 49645299 49645602 -201042252 + AluSq SINE Alu 1 304 -9 1199 102 0 0 chr2 49645602 49645768 -201042086 + AluSg/x SINE Alu 132 297 -13 1990 149 11 47 chr2 49645782 49646144 -201041710 - MER34B LTR ERV1 -216 349 1 202 336 139 29 chr2 49646213 49646350 -201041504 - L2 LINE L2 -2 3270 3119 458 264 58 108 chr2 49646369 49646402 -201041452 + L1ME4a LINE L1 5679 5712 -409 2256 70 3 0 chr2 49646402 49646709 -201041145 - AluSp SINE Alu 0 308 1 458 264 58 108 chr2 49646709 49646763 -201041091 + L1ME4a LINE L1 5712 5767 -354 2025 114 3 17 chr2 49646763 49647061 -201040793 - AluSx SINE Alu -16 296 3 458 264 58 108 chr2 49647061 49647096 -201040758 + L1ME4a LINE L1 5767 5802 -319 3916 145 6 37 chr2 49647096 49647167 -201040687 - MER41B LTR ERV1 0 635 563 2070 137 0 3 chr2 49647167 49647481 -201040373 + AluSq SINE Alu 1 313 0 3916 145 6 37 chr2 49647481 49647597 -201040257 - MER41B LTR ERV1 -72 563 445 1902 103 39 4 chr2 49647597 49647878 -201039976 - AluSx SINE Alu -21 291 1 3916 145 6 37 chr2 49647878 49648344 -201039510 - MER41B LTR ERV1 -190 445 1 458 264 58 108 chr2 49648344 49648476 -201039378 + L1ME4a LINE L1 5802 5923 -198 3159 87 18 22 chr2 49648608 49649054 -201038800 - MLT2A1 LTR ERVL 0 444 1 1613 176 3 14 chr2 49649066 49649361 -201038493 - AluJo SINE Alu -20 292 1 2159 110 0 10 chr2 49649700 49650008 -201037846 + AluSg SINE Alu 1 305 -5 741 229 41 6 chr2 49650112 49650282 -201037572 - MER110A LTR ERV1 -117 351 176 2177 116 0 0 chr2 49650287 49650598 -201037256 + AluSx SINE Alu 1 311 -1 788 189 6 51 chr2 49650627 49650802 -201037052 - MER20 DNA MER1_type 0 219 53 761 195 49 0 chr2 49650837 49651001 -201036853 - MER110A LTR ERV1 -296 172 1 1234 144 5 19 chr2 49651130 49651338 -201036516 + AluSx SINE Alu 1 205 -107 1461 184 11 55 chr2 49651433 49651780 -201036074 - MER31A LTR ERV1 0 485 154 1856 160 34 70 chr2 49651800 49651968 -201035886 - LTR56 LTR ERV1 0 445 272 2062 92 0 3 chr2 49651968 49652275 -201035579 + AluSc SINE Alu 1 306 0 1856 160 34 70 chr2 49652275 49652549 -201035305 - LTR56 LTR ERV1 -173 272 18 2073 97 0 10 chr2 49652555 49652853 -201035001 + AluSx SINE Alu 1 295 -17 436 184 35 23 chr2 49652855 49652866 -201034988 - MER31B LTR ERV1 -291 175 166 1852 120 10 49 chr2 49652866 49653174 -201034680 + AluSq SINE Alu 1 296 -17 436 184 35 23 chr2 49653174 49653249 -201034605 - MER31B LTR ERV1 -300 166 88 845 191 5 48 chr2 49653258 49653447 -201034407 + AluJo SINE Alu 45 225 -87 412 211 13 0 chr2 49653461 49653537 -201034317 - MER31B LTR ERV1 -389 77 1 668 196 13 51 chr2 49654317 49654475 -201033379 + FAM SINE Alu 7 158 -27 2053 115 0 0 chr2 49654519 49654805 -201033049 + AluSg SINE Alu 1 286 -24 877 216 195 14 chr2 49654822 49655212 -201032642 - MER39 LTR ERV1 -203 504 6 1701 160 17 3 chr2 49655291 49655585 -201032269 + AluSx SINE Alu 1 298 -14 961 199 3 158 chr2 49655919 49656005 -201031849 + MLT1A1 LTR MaLR 60 158 -207 2434 61 0 0 chr2 49656005 49656302 -201031552 - AluY SINE Alu -14 297 1 961 199 3 158 chr2 49656302 49656577 -201031277 + MLT1A1 LTR MaLR 158 365 0 249 230 230 11 chr2 49656577 49656656 -201031198 - MLT1H LTR MaLR -43 506 409 1069 181 0 9 chr2 49656656 49656872 -201030982 - AluY SINE Alu -15 296 83 451 102 0 0 chr2 49656872 49656931 -201030923 - AluSp/q SINE Alu -63 250 192 917 117 0 7 chr2 49656933 49657070 -201030784 - AluJb SINE Alu -176 136 1 605 234 50 116 chr2 49657076 49657396 -201030458 - MLT1H LTR MaLR -143 406 108 196 224 0 41 chr2 49657471 49657520 -201030334 - L2 LINE L2 -37 3235 3189 2129 105 3 0 chr2 49657640 49657946 -201029908 + AluSx SINE Alu 1 307 -5 651 264 216 56 chr2 49657981 49658279 -201029575 - L2 LINE L2 -297 3016 2767 1656 159 41 0 chr2 49658279 49658574 -201029280 + AluJo SINE Alu 1 307 -5 1790 112 87 17 chr2 49658575 49658862 -201028992 + AluSq SINE Alu 1 307 -6 651 264 216 56 chr2 49658862 49659133 -201028721 - L2 LINE L2 -546 2767 2541 1840 168 0 0 chr2 49659133 49659436 -201028418 + AluJb SINE Alu 1 303 -9 651 264 216 56 chr2 49659436 49659512 -201028342 - L2 LINE L2 -772 2541 2269 1215 167 56 24 chr2 49659527 49659779 -201028075 - MER110 LTR ERV1 -174 317 58 2259 94 0 28 chr2 49659789 49660108 -201027746 - AluSx SINE Alu -2 310 1 816 274 41 13 chr2 49660179 49660424 -201027430 - MIR SINE MIR 0 262 8 247 203 76 51 chr2 49660476 49660555 -201027299 - MER34 LTR ERV1 0 542 462 740 204 11 66 chr2 49660930 49660951 -201026903 + AluJo SINE Alu 126 147 -165 1944 135 3 3 chr2 49660951 49661254 -201026600 + AluSx SINE Alu 1 303 -9 740 204 11 66 chr2 49661254 49661413 -201026441 + AluJo SINE Alu 147 296 -16 233 236 0 67 chr2 49661418 49661507 -201026347 - MER34B LTR ERV1 -448 117 35 359 299 103 20 chr2 49661626 49661830 -201026024 - MIR SINE MIR -11 251 31 1619 141 47 14 chr2 49662065 49662342 -201025512 + AluJo SINE Alu 8 293 -19 2398 177 106 62 chr2 49662649 49662866 -201024988 + LTR65 LTR ERV1 1 207 -462 1492 161 10 57 chr2 49662866 49663164 -201024690 - AluJb SINE Alu -18 294 11 2398 177 106 62 chr2 49663164 49663586 -201024268 + LTR65 LTR ERV1 207 668 -1 1468 150 42 52 chr2 49663767 49664073 -201023781 - AluJo SINE Alu -9 303 1 802 246 64 34 chr2 49664102 49664338 -201023516 - MIR SINE MIR -13 249 7 411 176 122 54 chr2 49664394 49664542 -201023312 - MER119 DNA MER1_type -109 474 317 259 140 12 6 chr2 49664559 49664802 -201023052 + AluJo SINE Alu 1 301 -1 260 286 143 23 chr2 49665301 49665434 -201022420 - MIR SINE MIR -101 161 13 2046 122 13 0 chr2 49665490 49665793 -201022061 + AluSg SINE Alu 1 307 -3 1950 152 0 3 chr2 49665867 49666177 -201021677 + AluSx SINE Alu 1 309 -3 1100 159 0 68 chr2 49666180 49666243 -201021611 + AluJb SINE Alu 85 151 -161 1764 150 17 0 chr2 49666243 49666536 -201021318 + AluSx SINE Alu 3 300 -12 1100 159 0 68 chr2 49666536 49666692 -201021162 + AluJb SINE Alu 151 289 -23 590 275 21 7 chr2 49666791 49666933 -201020921 + MIR SINE MIR 5 148 -114 722 182 172 45 chr2 49666942 49667140 -201020714 + MER46C DNA MER2_type 9 231 -107 461 149 230 0 chr2 49667203 49667290 -201020564 + U6 snRNA snRNA 1 107 0 2215 62 0 36 chr2 49667316 49667624 -201020230 - AluY SINE Alu -14 297 1 2297 73 0 3 chr2 49667871 49668173 -201019681 - AluSq SINE Alu -12 301 1 325 213 67 0 chr2 49668185 49668260 -201019594 + MER46C DNA MER2_type 258 337 -1 332 230 14 0 chr2 49668262 49668336 -201019518 + MIR SINE MIR 154 228 -34 29 47 0 0 chr2 49668861 49668904 -201018950 + GC_rich Low_complexity Low_complexity 1 43 0 2022 94 20 3 chr2 49670286 49670585 -201017269 - AluSp SINE Alu -9 304 1 1917 110 11 0 chr2 49670665 49670946 -201016908 - AluSg SINE Alu -26 284 1 1746 119 41 7 chr2 49671049 49671342 -201016512 - AluSx SINE Alu -9 303 1 2144 105 3 0 chr2 49672162 49672458 -201015396 - AluSq SINE Alu -16 297 1 680 173 0 0 chr2 49672649 49672759 -201015095 - FLAM_C SINE Alu -32 111 2 1436 144 144 15 chr2 49672868 49673132 -201014722 + AluJb SINE Alu 1 298 -4 1322 177 55 19 chr2 49673461 49673732 -201014122 - AluJb SINE Alu -31 281 1 2357 93 0 0 chr2 49674067 49674377 -201013477 - AluSg SINE Alu 0 310 1 2316 86 0 6 chr2 49674383 49674696 -201013158 - AluSx SINE Alu -1 311 1 2072 105 20 3 chr2 49674709 49675048 -201012806 - AluSg1 SINE Alu 0 344 1 1092 147 51 5 chr2 49675437 49675634 -201012220 + MER2 DNA MER2_type 1 206 -139 833 191 22 11 chr2 49675639 49675822 -201012032 - AluJb SINE Alu -4 308 124 22 35 0 0 chr2 49675824 49675853 -201012001 + AT_rich Low_complexity Low_complexity 1 29 0 1327 153 0 9 chr2 49675964 49676180 -201011674 + AluSx SINE Alu 1 214 -98 273 29 0 0 chr2 49676967 49677001 -201010853 + (TG)n Simple_repeat Simple_repeat 1 34 0 1776 92 7 72 chr2 49677492 49677678 -201010176 - AluSx SINE Alu -1 311 149 1983 123 3 0 chr2 49677678 49677970 -201009884 - AluSq SINE Alu -20 293 1 1776 92 7 72 chr2 49677970 49678075 -201009779 - AluSx SINE Alu -163 149 39 707 161 0 94 chr2 49678325 49678474 -201009380 - FLAM_C SINE Alu -4 139 5 1119 172 0 100 chr2 49678489 49678779 -201009075 - AluJo SINE Alu -13 299 39 2331 94 7 0 chr2 49678863 49679172 -201008682 + AluSx SINE Alu 1 311 -1 1819 92 77 0 chr2 49679172 49679477 -201008377 + AluSg1 SINE Alu 1 325 0 180 163 0 122 chr2 49679492 49679541 -201008313 + L3b LINE CR1 1528 1570 -13 1845 133 7 3 chr2 49679562 49679848 -201008006 - AluSx SINE Alu -19 293 7 1480 105 14 5 chr2 49679882 49680092 -201007762 + AluSx SINE Alu 1 212 -100 1908 150 3 3 chr2 49680096 49680396 -201007458 - AluSx SINE Alu -12 300 1 2136 112 0 0 chr2 49680623 49680917 -201006937 - AluSg SINE Alu -16 294 1 243 0 0 0 chr2 49681247 49681274 -201006580 + (TG)n Simple_repeat Simple_repeat 2 28 0 1987 137 0 16 chr2 49681287 49681594 -201006260 - AluSx SINE Alu -9 303 2 344 157 22 67 chr2 49681599 49681688 -201006166 - AluJb SINE Alu -173 129 45 840 137 0 58 chr2 49682226 49682365 -201005489 - FLAM_C SINE Alu -11 132 2 1599 152 0 59 chr2 49682503 49682793 -201005061 + AluSx SINE Alu 1 273 -39 1057 107 107 6 chr2 49682866 49683034 -201004820 - MER30 DNA MER1_type -33 197 13 325 282 51 45 chr2 49683189 49683345 -201004509 - MIR3 SINE MIR 0 208 52 353 173 30 1 chr2 49683469 49683539 -201004315 - FLAM SINE Alu -14 119 54 1217 148 9 37 chr2 49684125 49684341 -201003513 - Tigger5 DNA MER2_type -62 2261 2052 227 214 0 0 chr2 49684337 49684379 -201003475 - Tigger5 DNA MER2_type -2265 58 17 * 1808 176 3 3 chr2 49687186 49687493 -201000361 - AluJb SINE Alu -5 307 1 778 176 50 80 chr2 49687568 49687767 -201000087 - AluJb SINE Alu -118 194 2 1516 176 20 7 chr2 49688161 49688457 -200999397 - AluSq SINE Alu -13 300 1 198 0 0 0 chr2 49688460 49688482 -200999372 + (T)n Simple_repeat Simple_repeat 1 22 0 1887 104 7 28 chr2 49688727 49689042 -200998812 - AluSg SINE Alu 0 309 1 806 168 0 0 chr2 49689970 49690107 -200997747 - AluJo SINE Alu -47 265 129 326 273 43 102 chr2 49690302 49690489 -200997365 - MER5B DNA MER1_type -1 177 2 2168 75 17 7 chr2 49691008 49691302 -200996552 - AluSq SINE Alu -16 297 1 27 29 0 0 chr2 49692568 49692602 -200995252 + AT_rich Low_complexity Low_complexity 1 34 0 873 110 0 8 chr2 49694689 49694816 -200993038 - AluJo SINE Alu -181 131 6 216 277 138 11 chr2 49696474 49696568 -200991286 + L2 LINE L2 3203 3308 -5 217 336 168 28 chr2 49696924 49697056 -200990798 + L2 LINE L2 2072 2184 -1130 1909 112 39 7 chr2 49697056 49697341 -200990513 - AluSx SINE Alu -18 294 1 217 336 168 28 chr2 49697341 49697607 -200990247 + L2 LINE L2 2184 2526 -788 645 223 8 0 chr2 49697608 49697729 -200990125 - FLAM_A SINE Alu -19 123 2 184 352 56 0 chr2 49697778 49697849 -200990005 + L2 LINE L2 2546 2620 -694 2346 76 3 10 chr2 49699243 49699557 -200988297 - AluSx SINE Alu 0 312 1 231 237 40 40 chr2 49699816 49699892 -200987962 - MER103 DNA DNA -87 79 4 3683 123 181 9 chr2 49699984 49700198 -200987656 - Tigger1 DNA MER2_type 0 2418 2242 2129 115 0 10 chr2 49700198 49700503 -200987351 - AluJo SINE Alu -10 302 1 3683 123 181 9 chr2 49700503 49700985 -200986869 - Tigger1 DNA MER2_type -176 2242 1602 1054 210 207 5 chr2 49700992 49701407 -200986447 - MER39 LTR ERV1 -154 499 1 1777 153 0 3 chr2 49701996 49702283 -200985571 - AluJo SINE Alu -4 308 23 9292 112 52 53 chr2 49702293 49703694 -200984160 - Tigger1 DNA MER2_type -812 1606 205 1603 104 124 12 chr2 49703694 49703953 -200983901 + AluSg1 SINE Alu 5 292 -17 9292 112 52 53 chr2 49703953 49704156 -200983698 - Tigger1 DNA MER2_type -2213 205 3 181 172 0 0 chr2 49704259 49704288 -200983566 - L2 LINE L2 -20 3293 3265 23 0 0 0 chr2 49704690 49704713 -200983141 + AT_rich Low_complexity Low_complexity 1 23 0 181 0 0 0 chr2 49705040 49705060 -200982794 + (TTTTG)n Simple_repeat Simple_repeat 1 170 0 2188 93 0 0 chr2 49705060 49705338 -200982516 - AluSg1 SINE Alu -31 278 1 1900 92 77 0 chr2 49705560 49705865 -200981989 - AluSg1 SINE Alu 0 325 1 2271 127 7 0 chr2 49705865 49706172 -200981682 - AluSx SINE Alu -1 311 3 1097 183 0 100 chr2 49706258 49706548 -200981306 + AluJo SINE Alu 39 299 -13 633 178 0 96 chr2 49706563 49706709 -200981145 + FLAM_C SINE Alu 5 136 -7 1511 140 104 36 chr2 49707230 49707508 -200980346 - AluSx SINE Alu -15 297 1 2202 99 3 0 chr2 49707546 49707853 -200980001 - AluSx SINE Alu 0 308 1 832 219 27 60 chr2 49707925 49708259 -200979595 + L1MC5 LINE L1 7603 7925 -36 505 232 156 54 chr2 49708520 49708796 -200979058 + HAL1b LINE L1 392 695 -653 2292 94 7 0 chr2 49709052 49709350 -200978504 + AluSq SINE Alu 1 300 -13 1000 164 11 11 chr2 49709543 49709720 -200978134 - AluJb SINE Alu -19 293 117 419 281 134 48 chr2 49709722 49709751 -200978103 - L1ME4a LINE L1 -262 5859 5834 1741 176 0 20 chr2 49709751 49710057 -200977797 + AluJo SINE Alu 1 300 -12 419 281 134 48 chr2 49710057 49710258 -200977596 - L1ME4a LINE L1 -287 5834 5609 22 0 0 0 chr2 49711173 49711195 -200976659 + AT_rich Low_complexity Low_complexity 1 22 0 903 162 0 0 chr2 49711875 49712011 -200975843 + FLAM_C SINE Alu 1 136 -7 726 174 0 8 chr2 49712011 49712132 -200975722 + AluJb SINE Alu 183 302 -10 1228 168 212 12 chr2 49712297 49712547 -200975307 + AluSg1 SINE Alu 1 300 -9 872 157 88 7 chr2 49712620 49712767 -200975087 + AluSg/x SINE Alu 132 290 -20 2128 121 3 3 chr2 49713115 49713412 -200974442 + AluSx SINE Alu 1 297 -15 1154 189 14 9 chr2 49713633 49713850 -200974004 + MER20 DNA MER1_type 2 219 0 838 100 0 33 chr2 49714554 49714674 -200973180 + AluSg/x SINE Alu 84 199 -113 26 30 0 0 chr2 49716215 49716248 -200971606 + AT_rich Low_complexity Low_complexity 1 33 0 205 357 77 30 chr2 49716348 49716516 -200971338 - MER5A DNA MER1_type -7 182 7 1227 149 5 10 chr2 49716747 49716948 -200970906 - AluSq SINE Alu -70 243 44 1491 181 50 25 chr2 49717036 49717317 -200970537 + AluJo SINE Alu 1 288 -24 1957 141 24 0 chr2 49717325 49717615 -200970239 + AluSx SINE Alu 1 297 -15 2120 121 13 0 chr2 49717710 49718015 -200969839 + AluSx SINE Alu 1 309 -3 243 245 113 19 chr2 49718322 49718428 -200969426 + HAL1 LINE L1 1854 1969 -538 830 128 8 0 chr2 49718428 49718553 -200969301 + AluSg/x SINE Alu 175 300 -10 508 255 65 30 chr2 49718667 49718930 -200968924 + HAL1 LINE L1 2147 2418 -89 2397 74 3 0 chr2 49718960 49719257 -200968597 + AluY SINE Alu 1 298 -13 1915 179 10 0 chr2 49719440 49719748 -200968106 + AluJb SINE Alu 1 311 -1 255 233 78 0 chr2 49720505 49720595 -200967259 - L1ME4a LINE L1 -11 6110 6014 1425 169 46 23 chr2 49720822 49721083 -200966771 - AluJb SINE Alu -17 295 29 854 143 97 39 chr2 49721313 49721467 -200966387 + FRAM SINE Alu 1 159 -17 2263 83 10 10 chr2 49721544 49721844 -200966010 - AluSq SINE Alu -13 300 1 1391 209 27 14 chr2 49723214 49723506 -200964348 - AluJb SINE Alu -6 296 1 1904 145 3 29 chr2 49723512 49723682 -200964172 - AluSx SINE Alu -10 302 142 2584 59 0 0 chr2 49723682 49723988 -200963866 - AluY SINE Alu -5 306 1 1904 145 3 29 chr2 49723988 49724127 -200963727 - AluSx SINE Alu -170 142 1 569 226 44 97 chr2 49724448 49724696 -200963158 - MIR SINE MIR -26 236 2 1343 187 12 0 chr2 49725859 49726100 -200961754 - ERVL LTR ERVL -988 4776 4533 * 1663 190 3 0 chr2 49726095 49726384 -200961470 - ERVL LTR ERVL -1286 4368 4079 775 230 113 15 chr2 49726394 49726668 -200961186 + HAL1 LINE L1 1155 1455 -1052 1064 93 0 0 chr2 49726692 49726831 -200961023 - AluSc SINE Alu -9 300 162 1162 246 75 31 chr2 49727453 49727840 -200960014 + MLT1I LTR MaLR 5 408 -1 2477 76 0 0 chr2 49728223 49728524 -200959330 + AluSc SINE Alu 1 301 -8 217 316 0 0 chr2 49728576 49728633 -200959221 - MIR3 SINE MIR -21 187 131 1636 164 37 20 chr2 49728727 49729026 -200958828 - AluJo SINE Alu -8 304 1 427 278 52 5 chr2 49729096 49729245 -200958609 - MIR SINE MIR -65 143 37 1293 236 90 47 chr2 49729331 49729819 -200958035 - MLT1J LTR MaLR -2 509 1 212 274 20 0 chr2 49729844 49729861 -200957993 - L2 LINE L2 -1 3312 3261 226 147 0 0 chr2 49729861 49729895 -200957959 - MIR SINE MIR -13 249 216 2252 114 3 0 chr2 49730381 49730689 -200957165 - AluSq SINE Alu -4 309 1 1938 141 39 0 chr2 49731041 49731325 -200956529 - AluSx SINE Alu -17 295 1 2348 118 0 0 chr2 49731861 49732222 -200955632 - AluSq SINE Alu 0 361 1 741 173 39 8 chr2 49732411 49732538 -200955316 + FLAM_A SINE Alu 1 131 -2 232 217 84 24 chr2 49732713 49732772 -200955082 - MLT1L LTR MaLR -10 605 538 2004 127 0 51 chr2 49732772 49733087 -200954767 + AluSx SINE Alu 1 299 -13 232 217 84 24 chr2 49733087 49733110 -200954744 - MLT1L LTR MaLR -77 538 518 1896 158 13 23 chr2 49733373 49733676 -200954178 + AluJo SINE Alu 1 300 -12 2227 102 7 16 chr2 49733845 49734150 -200953704 + AluSp SINE Alu 1 302 -11 2123 118 14 0 chr2 49734286 49734582 -200953272 + AluSx SINE Alu 1 300 -12 27 49 0 0 chr2 49735668 49735709 -200952145 + AT_rich Low_complexity Low_complexity 1 41 0 260 108 0 0 chr2 49735915 49735952 -200951902 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 478 130 0 0 chr2 49736085 49736154 -200951700 + AluJ/FRAM SINE Alu 218 286 -26 26 30 0 0 chr2 49736185 49736218 -200951636 + AT_rich Low_complexity Low_complexity 1 33 0 915 210 78 60 chr2 49736223 49736275 -200951579 + L1MC5 LINE L1 6981 7031 -930 2342 86 0 0 chr2 49736275 49736578 -200951276 + AluY SINE Alu 8 310 -1 915 210 78 60 chr2 49736578 49736873 -200950981 + L1MC5 LINE L1 7031 7334 -627 2085 89 4 4 chr2 49736989 49737290 -200950564 - AluSc SINE Alu 0 301 1 2354 73 0 7 chr2 49737362 49737665 -200950189 - AluSc SINE Alu -7 302 2 202 263 156 50 chr2 49737900 49738060 -200949794 + MIR SINE MIR 86 262 0 25 31 0 0 chr2 49738118 49738150 -200949704 + AT_rich Low_complexity Low_complexity 1 32 0 1470 196 10 41 chr2 49738150 49738441 -200949413 - AluJb SINE Alu -30 282 1 321 309 20 61 chr2 49738574 49738920 -200948934 - L1MEd LINE L1 -3432 2697 2366 308 262 151 24 chr2 49738924 49739050 -200948804 - L1MEd LINE L1 -3739 2390 2249 2220 96 3 0 chr2 49739086 49739392 -200948462 - AluSx SINE Alu 0 307 1 348 163 78 163 chr2 49739456 49739622 -200948232 - L1MEd LINE L1 -5136 983 832 290 257 48 107 chr2 49739772 49739978 -200947876 - L1MEd LINE L1 -5825 294 101 1675 149 66 10 chr2 49739999 49740288 -200947566 - AluSx SINE Alu -7 305 1 195 365 36 29 chr2 49741220 49741357 -200946497 + L2 LINE L2 1386 1523 -1791 2109 110 10 3 chr2 49741536 49741826 -200946028 + AluSp SINE Alu 1 292 -21 979 141 163 11 chr2 49741991 49742267 -200945587 - MER33 DNA MER1_type -6 318 1 1966 155 3 3 chr2 49742314 49742617 -200945237 + AluSx SINE Alu 1 303 -9 1078 140 42 76 chr2 49742622 49742778 -200945076 - MER7A DNA MER2_type -2812 226 81 2086 125 20 3 chr2 49742778 49743075 -200944779 + AluSx SINE Alu 1 302 -10 1078 140 42 76 chr2 49743075 49743154 -200944700 - MER7A DNA MER2_type -2957 81 1 2506 72 3 0 chr2 49743195 49743502 -200944352 + AluY SINE Alu 1 308 -3 1803 117 19 42 chr2 49743576 49743883 -200943971 + MER1B DNA MER1_type 40 339 0 24 32 0 0 chr2 49743937 49743968 -200943886 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 49744570 49744594 -200943260 + AT_rich Low_complexity Low_complexity 1 24 0 325 279 129 21 chr2 49744854 49744994 -200942860 - L2 LINE L2 -40 3273 3119 627 364 99 16 chr2 49745205 49745758 -200942096 - L2 LINE L2 -486 2828 2230 2060 134 7 13 chr2 49746572 49746878 -200940976 - AluSg SINE Alu -6 304 1 318 186 0 43 chr2 49747261 49747331 -200940523 - U6 snRNA snRNA -3 104 38 2280 100 7 0 chr2 49747341 49747641 -200940213 - AluSx SINE Alu -10 302 1 217 327 89 0 chr2 49747799 49747900 -200939954 - MIR SINE MIR -86 176 67 921 247 36 24 chr2 49748067 49748318 -200939536 - MIR SINE MIR -5 257 4 2264 99 0 0 chr2 49748427 49748721 -200939133 - AluSg SINE Alu -16 294 1 25 83 0 0 chr2 49748725 49748785 -200939069 + AT_rich Low_complexity Low_complexity 1 60 0 588 258 94 74 chr2 49748867 49749123 -200938731 + MIR SINE MIR 1 261 -1 254 244 12 70 chr2 49749351 49749437 -200938417 - MARNA DNA Mariner -75 511 431 346 60 0 0 chr2 49749548 49749598 -200938256 - Alu SINE Alu -1 299 250 198 0 0 0 chr2 49749853 49749875 -200937979 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 375 250 38 0 chr2 49749888 49749968 -200937886 + MIR3 SINE MIR 78 160 -48 717 218 45 6 chr2 49749968 49750147 -200937707 - MER5A DNA MER1_type 0 189 4 1138 126 111 15 chr2 49750552 49750750 -200937104 - AluJb SINE Alu -12 300 84 2138 119 7 13 chr2 49750903 49751206 -200936648 + AluSq SINE Alu 1 301 -12 810 224 6 6 chr2 49751315 49751485 -200936369 + FRAM SINE Alu 1 169 -7 520 318 120 0 chr2 49751568 49751867 -200935987 + HAL1 LINE L1 1599 1933 -574 821 132 0 59 chr2 49752637 49752773 -200935081 - FLAM_C SINE Alu -5 128 1 1011 139 0 0 chr2 49853032 49853176 -200834678 - AluSg/x SINE Alu -45 267 124 610 226 17 6 chr2 49853176 49853353 -200834501 - L1M4 LINE L1 -859 5287 5109 * 1537 213 85 20 chr2 49853349 49853748 -200834106 - L1MDa LINE L1 -6114 426 2 306 312 19 38 chr2 49854139 49854296 -200833558 - L1MEc LINE L1 -5303 1093 940 1970 205 68 48 chr2 49854453 49855057 -200832797 - L1MC4 LINE L1 -132 7910 7295 332 261 17 17 chr2 49855059 49855178 -200832676 - L1MEc LINE L1 -4602 1794 1676 6815 70 6 0 chr2 49855279 49856535 -200831319 + L1PA6 LINE L1 4893 6153 -1 353 287 0 0 chr2 49856545 49856632 -200831222 - L1MC4 LINE L1 -1342 6700 6614 2210 142 3 8 chr2 49856653 49857027 -200830827 + L1PB1 LINE L1 5777 6148 -3 377 304 18 9 chr2 49857052 49857164 -200830690 - MER5A DNA MER1_type -11 178 66 2167 125 3 3 chr2 49857512 49857824 -200830030 - AluSx SINE Alu 0 312 1 234 0 0 0 chr2 49857906 49857932 -200829922 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1961 138 0 0 chr2 49857941 49858217 -200829637 - AluSx SINE Alu -36 276 1 788 145 0 51 chr2 49859616 49859754 -200828100 + FLAM_C SINE Alu 1 131 -2 681 263 157 7 chr2 49859879 49860208 -200827646 + L1ME4a LINE L1 5459 5834 -287 392 265 118 21 chr2 49860610 49860768 -200827086 - MIR3 SINE MIR -23 185 7 237 219 144 56 chr2 49861328 49861488 -200826366 - L1MC5 LINE L1 -37 7924 7751 370 252 39 32 chr2 49861545 49861700 -200826154 - L1MC5 LINE L1 -298 7663 7508 4393 140 24 38 chr2 49861733 49861768 -200826086 - L1MB5 LINE L1 -8 6166 6132 1992 151 7 0 chr2 49861768 49862066 -200825788 - AluSq SINE Alu -13 300 1 4393 140 24 38 chr2 49862066 49862451 -200825403 - L1MB5 LINE L1 -42 6132 5743 2178 120 41 19 chr2 49862451 49862818 -200825036 - THE1C LTR MaLR 0 375 1 4393 140 24 38 chr2 49862818 49863287 -200824567 - L1MB5 LINE L1 -431 5743 5289 438 226 40 73 chr2 49863287 49863535 -200824319 - L1MC5 LINE L1 -449 7512 7273 27 29 0 0 chr2 49863830 49863864 -200823990 + AT_rich Low_complexity Low_complexity 1 34 0 5990 115 47 27 chr2 49864800 49865893 -200821961 + Tigger3b DNA MER2_type 1 1114 -117 390 355 77 0 chr2 49865909 49866092 -200821762 + MIR SINE MIR 54 250 -12 487 229 29 0 chr2 49867231 49867336 -200820518 + Tigger3b DNA MER2_type 1125 1232 0 381 43 0 0 chr2 49867357 49867404 -200820450 + (CAT)n Simple_repeat Simple_repeat 1 47 0 217 203 72 29 chr2 49869058 49869127 -200818727 + MIR SINE MIR 93 164 -98 572 139 59 10 chr2 49869130 49869231 -200818623 + FLAM_A SINE Alu 2 107 -35 192 77 0 0 chr2 49869243 49869269 -200818585 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 399 260 111 43 chr2 49870486 49870836 -200817018 - L1MC4a LINE L1 -104 6017 5641 735 164 0 0 chr2 49870854 49870970 -200816884 + AluSc SINE Alu 154 269 -40 1083 136 27 0 chr2 49871070 49871254 -200816600 - L1MC4a LINE L1 -569 5615 5427 1929 160 0 3 chr2 49871261 49871555 -200816299 - AluJb SINE Alu -19 293 1 618 348 39 4 chr2 49871926 49872156 -200815698 + MIR SINE MIR 19 256 -6 1372 157 0 5 chr2 49872237 49872460 -200815394 + L1PA15 LINE L1 5938 6159 -6 294 230 54 27 chr2 49873440 49873514 -200814340 - L2 LINE L2 0 3313 3238 288 226 8 120 chr2 49873605 49873738 -200814116 + MLT1H LTR MaLR 432 549 0 236 324 39 29 chr2 49873748 49873850 -200814004 - L2 LINE L2 -534 2780 2678 515 293 214 34 chr2 49873994 49874582 -200813272 - L2 LINE L2 -640 2674 1981 189 74 0 0 chr2 49874592 49874619 -200813235 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2021 122 7 0 chr2 49874621 49874900 -200812954 - AluSx SINE Alu -31 281 1 490 319 58 24 chr2 49874985 49875192 -200812662 + MIR SINE MIR 49 262 0 402 339 41 57 chr2 49875199 49875515 -200812339 - L2 LINE L2 -1383 1931 1621 1734 144 72 10 chr2 49875678 49875970 -200811884 - AluSg SINE Alu 0 310 1 24 53 0 0 chr2 49876573 49876611 -200811243 + AT_rich Low_complexity Low_complexity 1 38 0 265 274 14 16 chr2 49876956 49877037 -200810817 - MIR SINE MIR -41 167 87 1881 134 3 7 chr2 49878854 49879167 -200808687 - AluSx SINE Alu 0 312 1 777 255 115 42 chr2 49879210 49879790 -200808064 + MLT1F1 LTR MaLR 3 595 0 488 253 83 27 chr2 49879810 49880110 -200807744 + L1MEd LINE L1 941 1257 -4862 1509 221 72 10 chr2 49880354 49880719 -200807135 + L1ME1 LINE L1 5735 6129 -37 1847 146 31 11 chr2 49880719 49881006 -200806848 + AluSx SINE Alu 1 293 -19 1509 221 72 10 chr2 49881006 49881043 -200806811 + L1ME1 LINE L1 6129 6162 -4 321 330 17 17 chr2 49881090 49881205 -200806649 + HAL1 LINE L1 1489 1603 -904 738 247 21 21 chr2 49881207 49881393 -200806461 - MER5A DNA MER1_type -1 188 3 2982 239 58 22 chr2 49881840 49882733 -200805121 + MER97c DNA MER1_type? 2 938 -152 180 77 0 0 chr2 49882733 49882759 -200805095 + (CATA)n Simple_repeat Simple_repeat 1 26 0 2982 239 58 22 chr2 49882759 49882890 -200804964 + MER97c DNA MER1_type? 938 1063 -27 2174 117 16 13 chr2 49883485 49883793 -200804061 + AluSx SINE Alu 1 309 -3 2482 131 58 7 chr2 49884047 49884497 -200803357 - L1MD1 LINE L1 0 6242 5770 5455 51 4 6 chr2 49884501 49885185 -200802669 - L1PA8 LINE L1 -2 6170 5488 2085 202 14 33 chr2 49885185 49885633 -200802221 - L1MD1 LINE L1 -470 5772 5334 2324 105 6 10 chr2 49885633 49885946 -200801908 - AluSx SINE Alu 0 312 1 2085 202 14 33 chr2 49885946 49886017 -200801837 - L1MD1 LINE L1 -908 5334 5263 1722 126 20 12 chr2 49886142 49886389 -200801465 - AluSx SINE Alu -63 249 1 303 186 23 23 chr2 49886431 49886517 -200801337 - HAL1 LINE L1 -175 2332 2247 25 0 0 0 chr2 49886543 49886568 -200801286 + AT_rich Low_complexity Low_complexity 1 25 0 248 268 57 25 chr2 49886631 49886788 -200801066 - HAL1b LINE L1 -437 911 750 807 255 39 10 chr2 49887423 49887627 -200800227 + MIR SINE MIR 53 262 0 183 290 145 16 chr2 49887999 49888061 -200799793 - L2 LINE L2 -78 3194 3125 1341 198 4 8 chr2 49888735 49888982 -200798872 - AluJo SINE Alu -66 246 1 1956 222 17 14 chr2 49888982 49889521 -200798333 + MER63D DNA MER1_type 185 790 -271 398 225 81 12 chr2 49889545 49889690 -200798164 - L1M4 LINE L1 -754 5392 5242 393 264 94 9 chr2 49889690 49889796 -200798058 + L2 LINE L2 3193 3307 -6 318 306 96 19 chr2 49889796 49890263 -200797591 - L1M4 LINE L1 -904 5242 4740 853 250 60 0 chr2 49890291 49890507 -200797347 - MIR SINE MIR -27 235 7 1634 149 3 81 chr2 49890551 49890886 -200796968 - AluJo SINE Alu -3 309 1 795 167 0 0 chr2 49890890 49891016 -200796838 - FLAM_C SINE Alu -7 126 1 404 330 53 34 chr2 49891076 49891340 -200796514 - L1M4 LINE L1 -1501 4645 4377 210 71 0 0 chr2 49891539 49891567 -200796287 + (TTCC)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr2 49891774 49891799 -200796055 + AT_rich Low_complexity Low_complexity 1 25 0 267 318 23 35 chr2 49892044 49892305 -200795549 - L1M4 LINE L1 -2258 3888 3631 5389 209 15 13 chr2 49892325 49893818 -200794036 + L1 LINE L1 1945 3439 -2707 23 54 0 0 chr2 49894338 49894375 -200793479 + AT_rich Low_complexity Low_complexity 1 37 0 2244 105 3 0 chr2 49894669 49894991 -200792863 + AluSx SINE Alu 1 312 0 2001 92 0 78 chr2 49895904 49896263 -200791591 + AluSx SINE Alu 1 335 0 231 242 16 0 chr2 49896600 49896662 -200791192 + CT-rich Low_complexity Low_complexity 1 63 0 368 264 43 53 chr2 49896662 49896870 -200790984 - L1ME3A LINE L1 0 6170 5965 1144 243 62 52 chr2 49896987 49897523 -200790331 - L1MC5 LINE L1 -451 7510 6970 1132 164 82 39 chr2 49897592 49897725 -200790129 - L1MB5 LINE L1 0 6174 6048 2977 137 11 4 chr2 49897725 49898194 -200789660 - MER101 LTR ERV1 0 474 3 1132 164 82 39 chr2 49898194 49898340 -200789514 - L1MB5 LINE L1 -126 6048 5883 761 240 85 73 chr2 49898339 49898847 -200789007 - L1MC5 LINE L1 -854 6954 6476 * 420 300 103 43 chr2 49898975 49899442 -200788412 - HAL1b LINE L1 -515 833 339 805 154 6 36 chr2 49899443 49899810 -200788044 + CT-rich Low_complexity Low_complexity 1 355 0 503 282 51 78 chr2 49899819 49900010 -200787844 - HAL1b LINE L1 -1027 321 137 1800 151 6 41 chr2 49900010 49900327 -200787527 - AluJo SINE Alu -6 306 1 503 282 51 78 chr2 49900327 49900390 -200787464 - HAL1b LINE L1 -1211 137 74 5619 205 39 9 chr2 49900706 49901637 -200786217 + Charlie1a DNA MER1_type 43 1028 -1733 2040 80 45 0 chr2 49901637 49901901 -200785953 + AluSc SINE Alu 24 299 -10 5619 205 39 9 chr2 49901901 49902342 -200785512 + Charlie1a DNA MER1_type 1028 1455 0 491 308 131 4 chr2 49902760 49902997 -200784857 - L1M4 LINE L1 -2988 3969 3703 2848 199 52 45 chr2 49902998 49903919 -200783935 + MER69 DNA AcHobo 1596 2523 -3 547 291 80 34 chr2 49904117 49904474 -200783380 + L1MC4a LINE L1 4909 5319 -1002 2261 107 3 0 chr2 49904474 49904773 -200783081 + AluSp SINE Alu 1 300 -13 547 291 80 34 chr2 49904773 49905041 -200782813 + L1MC4a LINE L1 5319 5573 -748 597 284 60 20 chr2 49905051 49905277 -200782577 + L1MC4a LINE L1 5614 5852 -1956 1380 187 74 59 chr2 49905277 49905667 -200782187 + MSTD LTR MaLR 1 396 0 597 284 60 20 chr2 49905667 49905690 -200782164 + L1MC4a LINE L1 5852 5873 -1935 698 314 45 8 chr2 49906399 49906641 -200781213 + MIR SINE MIR 12 262 0 2162 147 0 0 chr2 49908632 49908944 -200778910 - AluSx SINE Alu 0 312 1 825 275 58 52 chr2 49909297 49909661 -200778193 + LTR67 LTR ERVL 101 466 -91 2743 143 56 49 chr2 49909682 49909970 -200777884 - L1MB8 LINE L1 -6 6172 5877 366 61 0 0 chr2 49909970 49910019 -200777835 + (TG)n Simple_repeat Simple_repeat 1 49 0 2743 143 56 49 chr2 49910019 49910262 -200777592 - L1MB8 LINE L1 -301 5877 5637 198 0 0 0 chr2 49911350 49911372 -200776482 + (T)n Simple_repeat Simple_repeat 1 22 0 1587 169 0 4 chr2 49911943 49912203 -200775651 + AluSx SINE Alu 53 311 -1 1703 170 4 0 chr2 49912265 49912535 -200775319 + AluSx SINE Alu 35 305 -7 3017 221 65 18 chr2 49912543 49912703 -200775151 - L1MEc LINE L1 -2962 3420 3269 1454 173 118 7 chr2 49912703 49912974 -200774880 - AluSg1 SINE Alu -8 301 1 3017 221 65 18 chr2 49912974 49913834 -200774020 - L1MEc LINE L1 -3113 3269 1386 2128 257 50 88 chr2 49913914 49914563 -200773291 - L1M4 LINE L1 -4342 2796 2124 2572 48 0 19 chr2 49914563 49914875 -200772979 - AluY SINE Alu -4 307 2 2128 257 50 88 chr2 49914875 49915525 -200772329 - L1M4 LINE L1 -5014 2124 1376 670 178 24 6 chr2 49915534 49915703 -200772151 + CT-rich Low_complexity Low_complexity 1 172 0 1875 155 47 0 chr2 49915724 49916021 -200771833 - AluJb SINE Alu -1 311 1 336 247 46 88 chr2 49916180 49916399 -200771455 - L1M4 LINE L1 -5597 1350 1029 198 0 0 0 chr2 49916602 49916624 -200771230 + (T)n Simple_repeat Simple_repeat 1 22 0 371 269 55 106 chr2 49916668 49916986 -200770868 - L1M4 LINE L1 -6231 624 12 1806 297 80 27 chr2 49916996 49917265 -200770589 - L1MEc LINE L1 -5571 992 739 5927 94 64 8 chr2 49917265 49918222 -200769632 - L1PA11 LINE L1 0 6174 5157 1806 297 80 27 chr2 49918222 49918700 -200769154 - L1MEc LINE L1 -5824 739 205 255 311 65 115 chr2 49918703 49919025 -200768829 - L2 LINE L2 -571 2743 2438 802 154 32 0 chr2 49919850 49919973 -200767881 - MLT1C LTR MaLR -4 463 337 1157 213 43 33 chr2 49920050 49920350 -200767504 - MLT1C LTR MaLR -123 344 42 2642 32 3 13 chr2 49920360 49920674 -200767180 - AluY SINE Alu 0 311 1 275 176 39 0 chr2 49920674 49920725 -200767129 - MLT1C LTR MaLR -412 55 3 887 213 0 18 chr2 49920853 49921017 -200766837 + FRAM SINE Alu 1 161 -5 3881 245 60 29 chr2 49922042 49923043 -200764811 + ERVL-F LTR ERVL 4592 5633 -131 1046 231 61 5 chr2 49923043 49923255 -200764599 + MER58A DNA MER1_type 1 224 0 3881 245 60 29 chr2 49923255 49923384 -200764470 + ERVL-F LTR ERVL 5633 5757 -7 2564 198 173 9 chr2 49923387 49923639 -200764215 + MLT2F LTR ERVL 5 214 -449 423 38 0 0 chr2 49923639 49923692 -200764162 + (TG)n Simple_repeat Simple_repeat 1 53 0 2564 198 173 9 chr2 49923692 49924005 -200763849 + MLT2F LTR ERVL 214 663 0 355 280 117 23 chr2 49924063 49924491 -200763363 - L1M4 LINE L1 -3311 2835 2368 612 268 79 0 chr2 49925021 49925211 -200762643 - MIR SINE MIR -56 206 2 3065 122 80 13 chr2 49926604 49927175 -200760679 - MER4B LTR ERV1 -5 774 1 4536 78 6 0 chr2 49927209 49927759 -200760095 - MER41A LTR ERV1 -1 553 1 9853 78 29 1 chr2 49927759 49929052 -200758802 - MER41A-int LTR ERV1 -2 5944 4616 38221 53 2 3 chr2 49929052 49934588 -200753266 - L1PA5 LINE L1 0 6154 623 730 95 0 0 chr2 49934586 49934681 -200753173 - L1PA5 LINE L1 -6048 98 4 * 2401 82 0 13 chr2 49934689 49934994 -200752860 - AluY SINE Alu -10 301 1 5899 119 56 56 chr2 49934995 49935765 -200752089 - MER41A-int LTR ERV1 -1203 3961 3674 1738 75 9 9 chr2 49935765 49935992 -200751862 - AluY SINE Alu -3 308 82 5899 119 56 56 chr2 49935992 49937067 -200750787 - MER41A-int LTR ERV1 -1490 3674 2600 4358 111 15 5 chr2 49937054 49937668 -200750186 - MER41A-int LTR ERV1 -5326 620 1 * 4370 79 18 0 chr2 49937754 49938298 -200749556 - MER41A LTR ERV1 0 554 1 742 258 20 20 chr2 49938768 49938966 -200748888 + L2 LINE L2 3116 3313 0 784 241 59 35 chr2 49939453 49939947 -200747907 - MLT1G1 LTR MaLR -7 583 11 280 250 23 34 chr2 49940319 49940407 -200747447 + LTR67 LTR ERVL 469 555 -2 222 282 42 14 chr2 49940548 49940619 -200747235 + MIR SINE MIR 165 237 -25 514 306 0 20 chr2 49940840 49940987 -200746867 + L2 LINE L2 2552 2695 -619 1224 274 11 15 chr2 49941265 49941824 -200746030 - MLT2E LTR ERVL 0 628 39 1137 240 148 6 chr2 49942065 49942403 -200745451 - LTR16A1 LTR ERVL 0 457 72 1992 166 15 51 chr2 49942897 49943289 -200744565 - MLT1F1 LTR MaLR 0 567 190 573 216 63 87 chr2 49943289 49943543 -200744311 + LTR1B LTR ERV1 1 248 -578 811 233 22 0 chr2 49943587 49943767 -200744087 - MLT1F1 LTR MaLR -376 191 8 229 317 61 12 chr2 49943976 49944058 -200743796 + MIR SINE MIR 22 107 -155 652 329 163 23 chr2 49944076 49945154 -200742700 - L2 LINE L2 -37 3235 1982 262 278 78 0 chr2 49945168 49945258 -200742596 + MIR SINE MIR 139 235 -27 2164 120 0 0 chr2 49945511 49945830 -200742024 - AluSx SINE Alu 0 319 1 261 0 0 0 chr2 49946037 49946066 -200741788 + (TG)n Simple_repeat Simple_repeat 2 30 0 238 327 60 27 chr2 49949587 49949737 -200738117 + MIR3 SINE MIR 45 199 -9 1661 256 97 31 chr2 49951225 49951740 -200736114 - MLT1H1 LTR MaLR -6 549 1 313 278 43 35 chr2 49952235 49952350 -200735504 - MIR SINE MIR -121 141 26 651 280 75 25 chr2 49952798 49953077 -200734777 - LTR16B LTR ERVL -137 327 35 298 280 0 40 chr2 49953421 49953521 -200734333 + L2 LINE L2 3210 3305 -8 265 293 226 11 chr2 49953590 49953877 -200733977 + L2 LINE L2 2314 2662 -652 412 177 25 0 chr2 49953912 49953991 -200733863 + MER96 DNA MER1_type? 4 84 -91 2089 115 3 3 chr2 49954027 49954313 -200733541 + AluSx SINE Alu 6 291 -21 378 286 50 8 chr2 49954419 49954538 -200733316 - MER5A DNA MER1_type 0 189 66 2223 99 0 3 chr2 49954748 49955042 -200732812 - AluSc SINE Alu -16 293 1 214 246 77 31 chr2 49955462 49955527 -200732327 + L2 LINE L2 3246 3313 0 626 253 22 33 chr2 49955616 49955798 -200732056 - MER5A DNA MER1_type -8 181 2 1782 198 135 44 chr2 49956407 49956882 -200730972 - MLT2B1 LTR ERVL -2 518 1 432 89 0 111 chr2 49957765 49957855 -200729999 - MADE1 DNA Mariner 0 80 1 232 250 59 29 chr2 49958303 49958371 -200729483 + L1P LINE L1 3610 3679 -2467 231 192 27 27 chr2 49958414 49958487 -200729367 + (CA)n Simple_repeat Simple_repeat 1 73 0 453 217 36 24 chr2 49958510 49958676 -200729178 + (CA)n Simple_repeat Simple_repeat 1 168 0 2268 114 10 0 chr2 49958736 49959043 -200728811 + AluSx SINE Alu 1 310 -2 286 280 40 8 chr2 49959102 49959227 -200728627 + L1ME LINE L1 3827 3955 -2191 542 284 26 31 chr2 49959231 49959425 -200728429 - MIR SINE MIR 0 262 70 298 301 80 64 chr2 49959476 49959916 -200727938 + L1ME LINE L1 3964 4396 -1750 1872 151 0 0 chr2 49959916 49960188 -200727666 + AluSx SINE Alu 1 272 -40 298 301 80 64 chr2 49960188 49960203 -200727651 + L1ME LINE L1 4396 4409 -1737 219 36 0 0 chr2 49960203 49960231 -200727623 + (CA)n Simple_repeat Simple_repeat 2 29 0 298 301 80 64 chr2 49960231 49960848 -200727006 + L1ME LINE L1 4409 5054 -1092 1302 152 15 0 chr2 49960946 49961143 -200726711 + AluSg/x SINE Alu 85 284 -28 344 296 59 41 chr2 49961170 49961339 -200726515 + L1ME LINE L1 5187 5358 -788 496 266 119 18 chr2 49961413 49961631 -200726223 + L1ME LINE L1 5382 5621 -500 1747 210 62 10 chr2 49961696 49962096 -200725758 + MLT1C LTR MaLR 34 454 -13 2638 117 20 3 chr2 49962126 49962484 -200725370 - THE1B LTR MaLR 0 364 1 283 294 68 7 chr2 49962484 49962630 -200725224 + L1ME LINE L1 5634 5788 -333 2736 145 53 23 chr2 49962631 49963135 -200724719 + MLT2A1 LTR ERVL 1 515 0 1686 188 3 10 chr2 49963466 49963764 -200724090 - AluJo SINE Alu -16 296 1 1526 206 143 14 chr2 49963819 49964168 -200723686 - MSTD LTR MaLR -2 394 1 1078 159 66 44 chr2 49964539 49964765 -200723089 + AluJo SINE Alu 82 312 0 219 231 0 0 chr2 49965550 49965590 -200722264 + polypurine Low_complexity Low_complexity 1 40 0 402 85 0 0 chr2 49965602 49965661 -200722193 + (CA)n Simple_repeat Simple_repeat 2 60 0 398 333 14 23 chr2 49966596 49966773 -200721081 + MIR SINE MIR 32 213 -49 1459 153 99 0 chr2 49967493 49967787 -200720067 + MER33 DNA MER1_type 2 324 0 2811 245 30 45 chr2 49970557 49971401 -200716453 + L1MCc LINE L1 648 1478 -4945 1051 193 0 0 chr2 49971408 49971600 -200716254 + AluJb SINE Alu 118 309 -3 631 277 170 34 chr2 49971646 49972288 -200715566 + L1MCc LINE L1 1605 2524 -4598 201 280 10 30 chr2 49972587 49972687 -200715167 + (CATATA)n Simple_repeat Simple_repeat 4 101 0 3031 77 15 0 chr2 49972709 49973100 -200714754 - L1PA13 LINE L1 -1 6162 5766 402 148 23 57 chr2 49973104 49973192 -200714662 - L1PA11 LINE L1 0 6174 6090 245 303 34 34 chr2 49973229 49973318 -200714536 - L2 LINE L2 -40 3232 3144 235 278 111 43 chr2 49973589 49973751 -200714103 - L2 LINE L2 -744 2570 2398 317 186 49 88 chr2 49973754 49973856 -200713998 + HAL1 LINE L1 100 197 -2310 405 304 62 78 chr2 49973981 49974218 -200713636 + HAL1 LINE L1 576 806 -1701 2044 112 3 50 chr2 49974218 49974521 -200713333 - AluSc SINE Alu -20 289 1 405 304 62 78 chr2 49974521 49974655 -200713199 + HAL1 LINE L1 806 941 -1566 3145 239 133 96 chr2 49974734 49974914 -200712940 + L1ME3A LINE L1 22 194 -6346 214 25 25 50 chr2 49974914 49974954 -200712900 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 3145 239 133 96 chr2 49974954 49976434 -200711420 + L1ME3A LINE L1 194 1783 -4757 1629 165 15 18 chr2 49976434 49976706 -200711148 + AluJo SINE Alu 12 282 -30 3145 239 133 96 chr2 49976706 49977224 -200710630 + L1ME3A LINE L1 1783 2281 -4259 1461 243 101 13 chr2 49977224 49977846 -200710008 + L1ME3A LINE L1 3303 3979 -2561 * 1736 174 108 26 chr2 49977828 49978218 -200709636 + L1MD1 LINE L1 5814 6235 -7 1558 274 40 52 chr2 49978265 49978803 -200709051 + L1ME3A LINE L1 4780 5306 -1234 2661 98 23 0 chr2 49978803 49979150 -200708704 - THE1A LTR MaLR 0 355 1 1558 274 40 52 chr2 49979150 49979501 -200708353 + L1ME3A LINE L1 5306 5659 -881 2347 91 3 0 chr2 49979501 49979797 -200708057 + AluSg SINE Alu 1 297 -13 1940 242 59 92 chr2 49979817 49980686 -200707168 + L1ME3A LINE L1 5722 6561 -3 1504 232 100 30 chr2 49981383 49981874 -200705980 + L1ME3A LINE L1 6039 6563 -1 324 362 26 13 chr2 49981953 49982105 -200705749 - MIR SINE MIR -86 176 23 342 0 0 0 chr2 49982600 49982638 -200705216 + (TG)n Simple_repeat Simple_repeat 2 39 0 230 257 110 28 chr2 49983177 49983286 -200704568 - MIR SINE MIR -58 150 33 515 237 133 58 chr2 49983650 49983823 -200704031 - MER5A DNA MER1_type 0 189 4 298 0 23 23 chr2 49984243 49984286 -200703568 + (TTTTC)n Simple_repeat Simple_repeat 3 45 0 2461 90 7 0 chr2 49984289 49984599 -200703255 - AluSx SINE Alu 0 312 1 566 269 62 6 chr2 49984688 49984848 -200703006 - MIR SINE MIR -13 249 81 927 223 62 43 chr2 49984924 49985180 -200702674 - MIR SINE MIR -1 261 1 429 252 98 14 chr2 49985781 49985924 -200701930 + MIR SINE MIR 58 212 -50 225 0 0 0 chr2 49986077 49986102 -200701752 + (T)n Simple_repeat Simple_repeat 1 25 0 233 369 23 8 chr2 49986977 49987107 -200700747 + MIR SINE MIR 116 247 -15 2232 89 10 3 chr2 49988516 49988819 -200699035 + AluSx SINE Alu 1 305 -7 2259 82 20 0 chr2 49988821 49989114 -200698740 + AluSg SINE Alu 3 301 -9 454 301 34 20 chr2 49989146 49989292 -200698562 - MIR SINE MIR -84 178 31 295 310 23 0 chr2 49989450 49989537 -200698317 - L2 LINE L2 -1 3312 3224 661 207 213 16 chr2 49989576 49990064 -200697790 + LTR50 LTR ERVL 1 684 -111 513 245 28 63 chr2 49990073 49990216 -200697638 + MER63 DNA MER1_type 2 765 -297 349 205 12 24 chr2 49990257 49990340 -200697514 + LTR33A LTR ERVL 440 521 -2 302 220 110 11 chr2 49991869 49991960 -200695894 - L1MC4 LINE L1 -1339 6703 6604 278 302 177 13 chr2 49992809 49992969 -200694885 - MIR3 SINE MIR -62 146 3 383 220 127 61 chr2 49993398 49993643 -200694211 - MER34 LTR ERV1 -5 537 277 27 0 0 0 chr2 49994089 49994116 -200693738 + AT_rich Low_complexity Low_complexity 1 27 0 2112 130 0 7 chr2 49994125 49994425 -200693429 + AluJo SINE Alu 1 298 -14 688 181 6 113 chr2 49994552 49994677 -200693177 + MER5A DNA MER1_type 16 118 -71 1593 142 6 83 chr2 49994677 49995001 -200692853 - AluJb SINE Alu -11 301 3 688 181 6 113 chr2 49995001 49995052 -200692802 + MER5A DNA MER1_type 118 173 -16 630 281 23 0 chr2 49995054 49995225 -200692629 + MER5B DNA MER1_type 4 178 0 4224 84 35 0 chr2 49995276 49995811 -200692043 + MER41A LTR ERV1 1 554 0 199 298 18 0 chr2 49996324 49996381 -200691473 + L2 LINE L2 3256 3313 0 286 312 35 43 chr2 49996388 49996529 -200691325 - L2 LINE L2 -262 3010 2871 2410 103 3 0 chr2 49996612 49996923 -200690931 - AluSx SINE Alu 0 312 1 943 271 76 15 chr2 49996951 49997280 -200690574 + MLT1I LTR MaLR 59 407 -2 219 36 0 0 chr2 49997836 49997864 -200689990 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 4032 146 12 11 chr2 49998095 49998734 -200689120 + L1MB2 LINE L1 5532 6171 0 2289 167 3 19 chr2 49998966 49999337 -200688517 + MLT1A1 LTR MaLR 1 365 0 2007 159 3 0 chr2 49999412 49999714 -200688140 + AluJb SINE Alu 1 303 -9 2121 142 53 12 chr2 49999899 50000222 -200687632 - MER1B DNA MER1_type -1 336 1 2424 77 10 7 chr2 50000232 50000531 -200687323 - AluSc SINE Alu -9 300 1 307 330 0 9 chr2 50000823 50000935 -200686919 - MARNA DNA Mariner -155 431 321 828 278 84 42 chr2 50000946 50001520 -200686334 + MLT2F LTR ERVL 12 650 -13 1022 65 0 8 chr2 50001529 50001653 -200686201 + AluSq SINE Alu 74 196 -117 1279 67 0 0 chr2 50001655 50001805 -200686049 + AluSq SINE Alu 149 298 -15 418 263 99 13 chr2 50001806 50001958 -200685896 - MARNA DNA Mariner -276 310 146 2121 126 0 0 chr2 50002028 50002349 -200685505 - AluSq SINE Alu 0 321 1 1595 158 39 11 chr2 50002563 50002848 -200685006 - AluJo SINE Alu -19 293 1 584 295 188 7 chr2 50003124 50003412 -200684442 - L2 LINE L2 0 3272 2933 601 312 151 45 chr2 50003465 50004295 -200683559 - L2 LINE L2 -458 2856 1939 418 362 0 0 chr2 50004617 50004755 -200683099 + GA-rich Low_complexity Low_complexity 1 138 0 2121 135 0 0 chr2 50004995 50005292 -200682562 - AluSx SINE Alu -12 300 4 260 324 81 0 chr2 50005292 50005440 -200682414 - L2 LINE L2 -1423 1891 1732 189 288 164 14 chr2 50005533 50005606 -200682248 + MER5A DNA MER1_type 43 126 -63 708 231 113 5 chr2 50005608 50005811 -200682043 - MER45C DNA AcHobo -11 942 718 1710 231 84 29 chr2 50005819 50006346 -200681508 + L1ME3 LINE L1 5385 5990 -172 1726 186 10 13 chr2 50006346 50006653 -200681201 + AluJb SINE Alu 1 306 -6 1710 231 84 29 chr2 50006653 50006836 -200681018 + L1ME3 LINE L1 5990 6162 0 282 29 0 0 chr2 50008776 50008811 -200679043 + (CA)n Simple_repeat Simple_repeat 1 35 0 2418 84 0 10 chr2 50008861 50009172 -200678682 + AluSg SINE Alu 1 308 -2 2099 129 13 7 chr2 50009179 50009488 -200678366 + AluJb SINE Alu 1 311 -1 827 272 77 85 chr2 50009567 50010178 -200677676 + L1ME4a LINE L1 5261 5875 -246 2178 125 3 3 chr2 50010178 50010489 -200677365 + AluSx SINE Alu 1 311 -1 827 272 77 85 chr2 50010489 50010533 -200677321 + L1ME4a LINE L1 5875 5918 -203 28 29 0 0 chr2 50010533 50010568 -200677286 + AT_rich Low_complexity Low_complexity 1 35 0 654 300 40 22 chr2 50011454 50011677 -200676177 + MIR SINE MIR 8 234 -28 1430 249 169 31 chr2 50011716 50012645 -200675209 + HAL1 LINE L1 1424 2480 -27 28 0 0 0 chr2 50012891 50012919 -200674935 + AT_rich Low_complexity Low_complexity 1 28 0 601 299 76 53 chr2 50013028 50013688 -200674166 + L1M4 LINE L1 3750 4424 -1722 279 205 115 0 chr2 50013726 50013804 -200674050 + L1MC4 LINE L1 7930 8016 -26 226 292 90 21 chr2 50013929 50014073 -200673781 + HAL1 LINE L1 1208 1361 -1146 4698 102 50 101 chr2 50014073 50015031 -200672823 + L1M1 LINE L1 1492 2400 -5165 347 67 0 0 chr2 50015038 50015083 -200672771 - MLT1A1 LTR MaLR -222 143 99 21 36 0 0 chr2 50016231 50016259 -200671595 + AT_rich Low_complexity Low_complexity 1 28 0 8839 189 21 13 chr2 50016259 50016618 -200671236 - L1PB1 LINE L1 -3 6864 6509 276 30 0 0 chr2 50016618 50016651 -200671203 + (TA)n Simple_repeat Simple_repeat 1 33 0 8839 189 21 13 chr2 50016651 50019207 -200668647 - L1PB1 LINE L1 -358 6509 3971 7930 105 41 50 chr2 50019214 50019597 -200668257 - L1PB1 LINE L1 -4334 2529 2144 2030 148 3 0 chr2 50019597 50019887 -200667967 + AluSx SINE Alu 1 291 -21 7930 105 41 50 chr2 50019887 50019916 -200667938 - L1PB1 LINE L1 -4719 2144 2116 2249 109 3 0 chr2 50019916 50020218 -200667636 + AluSq SINE Alu 11 313 0 7930 105 41 50 chr2 50020218 50021254 -200666600 - L1PB1 LINE L1 -4747 2116 1094 259 321 18 12 chr2 50021317 50021485 -200666369 + L1M4 LINE L1 2860 3028 -3118 877 270 73 31 chr2 50022062 50022417 -200665437 - MLT1E LTR MaLR -168 425 56 1004 215 119 91 chr2 50022420 50022734 -200665120 - L1MCc LINE L1 -5999 424 95 1883 149 0 19 chr2 50022734 50023042 -200664812 - AluJo SINE Alu -4 308 7 1004 215 119 91 chr2 50023042 50023122 -200664732 - L1MCc LINE L1 -6328 95 19 * 1225 294 63 30 chr2 50023114 50023345 -200664509 + L1M4 LINE L1 2897 3119 -3027 2018 130 0 40 chr2 50023345 50023667 -200664187 + AluSx SINE Alu 1 309 -3 1225 294 63 30 chr2 50023667 50024292 -200663562 + L1M4 LINE L1 3119 3781 -2365 748 206 4 40 chr2 50024836 50025064 -200662790 + L1M4 LINE L1 3773 3992 -2154 580 223 80 42 chr2 50025077 50025372 -200662482 - MLT1F LTR MaLR -11 531 282 912 280 81 31 chr2 50025372 50025963 -200661891 - MLT1G LTR MaLR 0 590 1 657 305 53 12 chr2 50025964 50026302 -200661552 + L1M4 LINE L1 3995 4346 -1800 25 0 0 0 chr2 50026635 50026660 -200661194 + AT_rich Low_complexity Low_complexity 1 25 0 943 244 142 4 chr2 50026667 50027117 -200660737 + L1M4 LINE L1 4356 4867 -1279 352 331 35 7 chr2 50027307 50027449 -200660405 + MLT1I LTR MaLR 137 282 -127 238 256 15 95 chr2 50027449 50027586 -200660268 + MLT1I LTR MaLR 258 383 -26 676 300 86 41 chr2 50027828 50028387 -200659467 - L1MEd LINE L1 -4585 1725 1193 1553 179 47 75 chr2 50028387 50028737 -200659117 - MLT2D LTR ERVL 0 414 77 2460 88 0 0 chr2 50028737 50029043 -200658811 + AluY SINE Alu 1 306 -5 1553 179 47 75 chr2 50029043 50029116 -200658738 - MLT2D LTR ERVL -337 77 3 676 300 86 41 chr2 50029116 50029360 -200658494 - L1MEd LINE L1 -5117 1193 961 2473 73 3 0 chr2 50029360 50029662 -200658192 - AluSx SINE Alu -9 303 1 676 300 86 41 chr2 50029662 50030043 -200657811 - L1MEd LINE L1 -5349 961 447 185 329 73 29 chr2 50031188 50031325 -200656529 + MIR SINE MIR 47 189 -73 14764 181 28 54 chr2 50031325 50037526 -200650328 + L1MA4 LINE L1 3 5997 -1005 1693 189 0 7 chr2 50037526 50037812 -200650042 + AluJo SINE Alu 5 288 -24 14764 181 28 54 chr2 50037812 50038793 -200649061 + L1MA4 LINE L1 5997 7002 0 291 54 0 0 chr2 50040257 50040294 -200647560 + (TG)n Simple_repeat Simple_repeat 2 38 0 859 251 133 40 chr2 50040816 50041163 -200646691 - MLT1I LTR MaLR -30 379 1 4902 162 66 31 chr2 50041267 50042170 -200645684 + MER45B DNA AcHobo 2 945 -636 2160 121 3 7 chr2 50042170 50042475 -200645379 - AluSx SINE Alu -8 304 1 4902 162 66 31 chr2 50042475 50042575 -200645279 + MER45B DNA AcHobo 945 1040 0 195 206 0 0 chr2 50042634 50042668 -200645186 - MIR3 SINE MIR -24 184 151 253 194 81 0 chr2 50043054 50043116 -200644738 + MIR SINE MIR 129 195 -67 8411 57 21 1 chr2 50043122 50044172 -200643682 - MER11C LTR ERVK 0 1071 1 592 117 0 0 chr2 50044316 50044410 -200643444 - L1MB2 LINE L1 -2 6169 6076 3118 129 9 38 chr2 50044410 50044770 -200643084 + MER34B LTR ERV1 4 346 -219 1928 152 3 7 chr2 50044770 50045091 -200642763 + AluSx SINE Alu 1 320 0 3118 129 9 38 chr2 50045091 50045286 -200642568 + MER34B LTR ERV1 346 545 -20 1676 139 14 3 chr2 50045297 50045584 -200642270 - L1MB2 LINE L1 -93 6078 5789 1417 213 34 50 chr2 50045773 50046153 -200641701 + MLT1A2 LTR MaLR 1 374 0 21 0 0 0 chr2 50046174 50046195 -200641659 + AT_rich Low_complexity Low_complexity 1 21 0 2135 107 13 3 chr2 50046252 50046550 -200641304 - AluSq SINE Alu -12 301 1 466 275 43 29 chr2 50046614 50046752 -200641102 + MIR SINE MIR 4 143 -119 204 340 0 0 chr2 50046740 50046790 -200641064 + L2 LINE L2 3253 3302 -11 * 2283 112 0 0 chr2 50046946 50047251 -200640603 - AluSg SINE Alu -5 305 1 455 189 94 8 chr2 50048016 50048143 -200639711 + L1MB3 LINE L1 5400 5537 -2271 2215 119 0 3 chr2 50048166 50048469 -200639385 + AluSq SINE Alu 3 304 -9 212 200 17 0 chr2 50048748 50048808 -200639046 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 3633 139 9 38 chr2 50049322 50049933 -200637921 + L1MB3 LINE L1 5540 6132 -51 2002 156 3 3 chr2 50049933 50050240 -200637614 + AluJo SINE Alu 1 307 -5 3633 139 9 38 chr2 50050240 50050288 -200637566 + L1MB3 LINE L1 6132 6180 -3 509 299 62 45 chr2 50050317 50050561 -200637293 + MIR SINE MIR 3 250 -12 204 40 0 0 chr2 50050572 50050597 -200637257 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 261 83 0 0 chr2 50050801 50050837 -200637017 + (GGA)n Simple_repeat Simple_repeat 2 37 0 271 250 92 17 chr2 50051365 50051485 -200636369 + HAL1 LINE L1 804 932 -1575 221 107 18 54 chr2 50051489 50051545 -200636309 + (CAAAAA)n Simple_repeat Simple_repeat 2 55 0 595 238 58 32 chr2 50051552 50051740 -200636114 + MLT1G LTR MaLR 10 202 -388 1299 124 66 9 chr2 50051740 50051966 -200635888 - MSTB1 LTR MaLR 0 432 194 932 130 65 13 chr2 50051968 50052122 -200635732 - FRAM SINE Alu -17 159 1 1066 149 43 0 chr2 50052122 50052310 -200635544 - MSTB1 LTR MaLR -236 196 1 6456 211 51 48 chr2 50052310 50053291 -200634563 - MSTB1-int LTR MaLR 0 1651 675 566 206 0 64 chr2 50053291 50053432 -200634422 + FLAM_C SINE Alu 2 133 0 6456 211 51 48 chr2 50053432 50053729 -200634125 - MSTB1-int LTR MaLR -976 675 380 2475 67 13 0 chr2 50053729 50054027 -200633827 + AluSp SINE Alu 1 302 -11 6456 211 51 48 chr2 50054027 50054388 -200633466 - MSTB1-int LTR MaLR -1271 380 6 2036 165 75 8 chr2 50054392 50054792 -200633062 - MSTB1 LTR MaLR -3 429 3 1109 239 152 3 chr2 50054793 50054910 -200632944 + MLT1G LTR MaLR 197 295 -295 1801 177 30 19 chr2 50054910 50055271 -200632583 - MLT1A1 LTR MaLR 0 365 1 1109 239 152 3 chr2 50055271 50055496 -200632358 + MLT1G LTR MaLR 295 590 0 910 260 156 63 chr2 50055539 50056060 -200631794 + HAL1 LINE L1 1022 1494 -1013 2082 138 3 0 chr2 50056060 50056350 -200631504 + AluSq SINE Alu 1 291 -22 2190 122 6 6 chr2 50056359 50056670 -200631184 + AluSx SINE Alu 1 311 -1 910 260 156 63 chr2 50056670 50056942 -200630912 + HAL1 LINE L1 1501 1899 -608 1372 210 45 21 chr2 50056942 50057023 -200630831 + MER58B DNA MER1_type 1 79 -2341 1852 119 88 0 chr2 50057023 50057308 -200630546 - AluJb SINE Alu -2 310 1 1372 210 45 21 chr2 50057308 50057559 -200630295 + MER58B DNA MER1_type 79 341 0 200 160 20 20 chr2 50057907 50057957 -200629897 + A-rich Low_complexity Low_complexity 3 52 0 941 281 152 36 chr2 50058282 50058388 -200629466 + L2 LINE L2 2421 2513 -800 2041 146 0 0 chr2 50058388 50058682 -200629172 - AluSx SINE Alu -18 294 1 2178 148 0 0 chr2 50058682 50058987 -200628867 - AluSx SINE Alu -7 305 1 941 281 152 36 chr2 50058987 50059658 -200628196 + L2 LINE L2 2512 3300 -13 207 0 0 0 chr2 50059660 50059683 -200628171 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 321 247 53 89 chr2 50059687 50059877 -200627977 + HAL1b LINE L1 733 915 -433 1560 183 4 15 chr2 50060543 50060817 -200627037 + AluJo SINE Alu 7 277 -35 30 27 0 0 chr2 50060832 50060869 -200626985 + AT_rich Low_complexity Low_complexity 1 37 0 1935 85 23 16 chr2 50061822 50062080 -200625774 + AluSq SINE Alu 1 260 -53 183 42 0 0 chr2 50062100 50062124 -200625730 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1608 299 76 9 chr2 50062221 50062800 -200625054 - Tigger8 DNA MER2_type -47 619 2 3211 162 55 51 chr2 50062927 50063599 -200624255 + LTR8A LTR ERV1 34 708 -19 248 200 0 0 chr2 50063665 50063710 -200624144 + L2 LINE L2 3258 3302 -11 2421 121 113 3 chr2 50063792 50064233 -200623621 + MER4E LTR ERV1 126 779 0 866 227 57 30 chr2 50065683 50065850 -200622004 + L1MC4 LINE L1 7687 7865 -177 2681 178 61 115 chr2 50065850 50066618 -200621236 - LTR8A LTR ERV1 0 727 1 866 227 57 30 chr2 50066618 50066714 -200621140 + L1MC4 LINE L1 7865 7957 -85 2309 112 7 0 chr2 50067196 50067501 -200620353 + AluSx SINE Alu 1 307 -5 201 74 0 0 chr2 50067501 50067528 -200620326 + (GA)n Simple_repeat Simple_repeat 1 27 0 352 321 118 37 chr2 50067678 50068058 -200619796 + MLT1J LTR MaLR 99 509 -2 475 181 53 105 chr2 50068060 50068177 -200619677 + MER112 DNA MER1_type 67 189 -71 1895 173 0 0 chr2 50068177 50068472 -200619382 + AluSx SINE Alu 1 295 -17 475 181 53 105 chr2 50068472 50068484 -200619370 + MER112 DNA MER1_type 189 200 -60 2278 95 0 0 chr2 50068484 50068798 -200619056 - AluSx SINE Alu 0 314 1 475 181 53 105 chr2 50068798 50068837 -200619017 + MER112 DNA MER1_type 200 228 -32 247 320 0 0 chr2 50068849 50068927 -200618927 - MER116 DNA Mariner -2 78 1 1284 201 112 24 chr2 50069497 50069835 -200618019 + L1ME2 LINE L1 5795 6162 -2 22 35 0 0 chr2 50070058 50070087 -200617767 + AT_rich Low_complexity Low_complexity 1 29 0 1097 253 148 27 chr2 50070199 50070645 -200617209 - L2 LINE L2 -8 3305 2806 220 214 0 0 chr2 50070710 50070752 -200617102 + (TG)n Simple_repeat Simple_repeat 1 42 0 312 338 176 7 chr2 50070783 50071242 -200616612 + L2 LINE L2 2310 2846 -468 1127 246 185 24 chr2 50073230 50073685 -200614169 - MER115 DNA AcHobo -8 685 157 981 234 21 0 chr2 50073685 50073877 -200613977 + MER58A DNA MER1_type 1 196 -28 458 242 0 88 chr2 50073872 50074054 -200613800 - MER115 DNA AcHobo -527 166 1 * 2187 131 0 0 chr2 50074294 50074592 -200613262 + AluSx SINE Alu 1 298 -14 213 311 108 0 chr2 50075201 50075275 -200612579 + L2 LINE L2 3186 3267 -5 2313 115 3 0 chr2 50075795 50076099 -200611755 + AluSx SINE Alu 1 305 -7 24 67 0 0 chr2 50076138 50076183 -200611671 + AT_rich Low_complexity Low_complexity 1 45 0 538 301 13 13 chr2 50076592 50076748 -200611106 + MER5B DNA MER1_type 11 166 -12 1940 156 0 3 chr2 50077606 50077909 -200609945 - AluJo SINE Alu 0 302 1 289 280 4 30 chr2 50078064 50078153 -200609701 + MER5B DNA MER1_type 11 107 -82 819 190 128 69 chr2 50078403 50078782 -200609072 - LTR48 LTR ERV1 0 787 227 1063 171 21 67 chr2 50078913 50078995 -200608859 + MER96B DNA MER1_type? 190 274 -143 1951 140 10 29 chr2 50078995 50079303 -200608551 + AluJo SINE Alu 1 302 -10 1063 171 21 67 chr2 50079303 50079459 -200608395 + MER96B DNA MER1_type? 274 417 0 216 250 39 0 chr2 50079718 50079770 -200608084 - MIR SINE MIR -117 91 38 21 0 0 0 chr2 50079911 50079932 -200607922 + AT_rich Low_complexity Low_complexity 1 21 0 1559 168 11 32 chr2 50079981 50080261 -200607593 + AluJo SINE Alu 9 282 -30 488 129 0 0 chr2 50080261 50080331 -200607523 - AluJ/FRAM SINE Alu -14 298 229 203 186 0 23 chr2 50082307 50082350 -200605504 + A-rich Low_complexity Low_complexity 3 44 0 1919 186 70 32 chr2 50082473 50082915 -200604939 - LTR2B LTR ERV1 0 490 32 198 0 0 0 chr2 50084123 50084145 -200603709 + (T)n Simple_repeat Simple_repeat 1 22 0 264 59 0 0 chr2 50084388 50084422 -200603432 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 2017 135 0 0 chr2 50084456 50084745 -200603109 - AluSx SINE Alu -23 289 1 198 0 0 0 chr2 50085453 50085475 -200602379 + (T)n Simple_repeat Simple_repeat 1 22 0 291 54 0 0 chr2 50085717 50085754 -200602100 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 2250 100 0 0 chr2 50085785 50086074 -200601780 - AluSx SINE Alu -23 289 1 184 293 0 0 chr2 50086402 50086443 -200601411 + MIR SINE MIR 20 60 -202 335 247 0 12 chr2 50086445 50086526 -200601328 - MER116 DNA Mariner 0 80 1 239 274 73 40 chr2 50086998 50087122 -200600732 - MER69A DNA AcHobo -29 148 21 446 348 19 13 chr2 50087200 50087358 -200600496 - L2 LINE L2 -556 2758 2600 273 26 0 0 chr2 50087528 50087567 -200600287 - AluSx SINE Alu 0 300 262 1823 101 0 0 chr2 50087567 50087795 -200600059 - AluSx SINE Alu -84 228 1 239 344 125 16 chr2 50088268 50088396 -200599458 + L2 LINE L2 3122 3263 -9 2132 229 55 12 chr2 50089113 50089603 -200598251 - LTR40a LTR ERVL -2 517 7 547 265 85 0 chr2 50090574 50090763 -200597091 + MIR SINE MIR 56 260 -2 202 234 0 0 chr2 50090774 50090821 -200597033 + (TAAA)n Simple_repeat Simple_repeat 4 50 0 441 229 0 0 chr2 50091000 50091083 -200596771 + Tigger5 DNA MER2_type 2239 2321 -2 342 197 16 0 chr2 50091084 50091145 -200596709 - Tigger5 DNA MER2_type -2247 76 15 29 0 0 0 chr2 50091452 50091481 -200596373 + AT_rich Low_complexity Low_complexity 1 29 0 5579 78 7 14 chr2 50091984 50092680 -200595174 - LTR8 LTR ERV1 0 691 1 2069 210 61 7 chr2 50092990 50093433 -200594421 + MLT1C LTR MaLR 1 467 0 298 299 0 11 chr2 50093466 50093553 -200594301 + L2 LINE L2 3228 3313 0 209 286 0 0 chr2 50094150 50094199 -200593655 + MER5A DNA MER1_type 1 49 -140 516 277 81 70 chr2 50094202 50094225 -200593629 + L1MC4a LINE L1 4747 4768 -1378 2178 103 27 0 chr2 50094225 50094526 -200593328 + AluY SINE Alu 3 311 0 516 277 81 70 chr2 50094526 50095044 -200592810 + L1MC4a LINE L1 4768 5294 -852 1013 123 0 182 chr2 50095071 50095307 -200592547 + 7SK RNA RNA 1 193 0 2156 94 35 0 chr2 50095326 50095613 -200592241 + AluSq SINE Alu 1 297 -16 2022 248 47 32 chr2 50095620 50096237 -200591617 + L1MC4a LINE L1 5314 5939 -1869 2116 114 3 16 chr2 50098615 50098923 -200588931 + AluSx SINE Alu 1 304 -8 1126 182 0 6 chr2 50098975 50099151 -200588703 + FAM SINE Alu 1 175 0 200 273 232 0 chr2 50099179 50099278 -200588576 + L2 LINE L2 2736 2857 -457 1735 179 3 0 chr2 50099705 50099990 -200587864 + AluJb SINE Alu 1 286 -26 21 0 0 0 chr2 50099990 50100011 -200587843 + AT_rich Low_complexity Low_complexity 1 21 0 293 246 208 23 chr2 50100628 50100758 -200587096 + MIR SINE MIR 109 262 0 2186 94 28 0 chr2 50100812 50101098 -200586756 + AluSc SINE Alu 1 294 -15 495 225 9 0 chr2 50101523 50101634 -200586220 + MIR3 SINE MIR 85 196 -12 566 261 88 85 chr2 50101967 50102088 -200585766 + L1ME3A LINE L1 5610 5729 -441 2002 147 7 0 chr2 50102088 50102388 -200585466 + AluSx SINE Alu 1 302 -10 566 261 88 85 chr2 50102388 50102607 -200585247 + L1ME3A LINE L1 5729 5951 -219 630 299 130 14 chr2 50103249 50103533 -200584321 + MLT1J LTR MaLR 137 453 -58 349 36 18 18 chr2 50103614 50103670 -200584184 + (TA)n Simple_repeat Simple_repeat 2 57 0 324 264 68 20 chr2 50103701 50103849 -200584005 + HAL1b LINE L1 606 760 -588 235 290 0 0 chr2 50103884 50103946 -200583908 + HAL1b LINE L1 851 912 -436 460 194 46 106 chr2 50103986 50104223 -200583631 + HAL1b LINE L1 985 1207 -141 256 266 207 41 chr2 50104655 50104784 -200583070 - MIR SINE MIR -62 146 22 253 175 0 0 chr2 50104879 50104919 -200582935 - L3b LINE CR1 -8 1575 1536 269 298 12 12 chr2 50105664 50105748 -200582106 + MIR SINE MIR 60 143 -119 1906 152 7 7 chr2 50105873 50106170 -200581684 - AluJb SINE Alu -15 297 1 330 235 76 45 chr2 50106264 50106396 -200581458 - MLT1J LTR MaLR -15 496 361 1683 184 3 26 chr2 50106500 50106805 -200581049 - AluJo SINE Alu -14 298 1 1870 159 75 31 chr2 50106893 50107252 -200580602 + THE1C LTR MaLR 1 375 0 244 279 105 12 chr2 50107252 50107338 -200580516 - MLT1L LTR MaLR -521 94 1 1013 137 0 7 chr2 50107884 50108030 -200579824 + AluJb SINE Alu 1 145 -167 1644 168 0 48 chr2 50108044 50108359 -200579495 + AluJo SINE Alu 11 310 -2 281 311 19 19 chr2 50108607 50108713 -200579141 + MER5A DNA MER1_type 82 187 -2 1713 159 0 63 chr2 50108793 50108928 -200578926 + AluJb SINE Alu 1 143 -169 2383 74 40 0 chr2 50108928 50109227 -200578627 + AluY SINE Alu 1 311 0 1713 159 0 63 chr2 50109227 50109406 -200578448 + AluJb SINE Alu 143 295 -17 1832 162 3 3 chr2 50109416 50109727 -200578127 + AluSx SINE Alu 1 311 0 1404 235 149 31 chr2 50109837 50110288 -200577566 + MLT1E LTR MaLR 90 593 0 1036 178 16 31 chr2 50110580 50110771 -200577083 - MER5A DNA MER1_type 0 189 2 1925 158 0 3 chr2 50111013 50111304 -200576550 + AluJb SINE Alu 1 290 -22 5294 25 0 0 chr2 50111313 50111884 -200575970 + L1PA5 LINE L1 5584 6154 0 1907 90 0 126 chr2 50113355 50113689 -200574165 - AluSx SINE Alu -9 293 2 2264 113 0 0 chr2 50114542 50114833 -200573021 + AluSq SINE Alu 1 291 -22 757 214 25 6 chr2 50114898 50115057 -200572797 + Tigger3(Golem) DNA MER2_type 1 162 -2867 * 3777 120 76 47 chr2 50115054 50115371 -200572483 + Tigger3(Golem) DNA MER2_type 2231 2537 -491 1284 148 201 8 chr2 50115371 50115615 -200572239 - AluJb SINE Alu -11 291 1 3777 120 76 47 chr2 50115615 50115634 -200572220 + Tigger3(Golem) DNA MER2_type 2537 2554 -474 216 0 0 0 chr2 50115634 50115658 -200572196 + (TA)n Simple_repeat Simple_repeat 2 25 0 1562 153 130 0 chr2 50115658 50115919 -200571935 - AluJb SINE Alu -16 296 2 3777 120 76 47 chr2 50115919 50116355 -200571499 + Tigger3(Golem) DNA MER2_type 2553 3028 0 21 57 0 0 chr2 50116732 50116767 -200571087 + AT_rich Low_complexity Low_complexity 1 35 0 5251 88 40 29 chr2 50116814 50117620 -200570234 + L1MA2 LINE L1 5490 6304 0 2304 109 24 24 chr2 50118341 50118716 -200569138 - THE1C LTR MaLR 0 375 1 444 282 13 26 chr2 50119450 50119606 -200568248 + HAL1 LINE L1 13 166 -2341 2795 251 113 60 chr2 50119608 50121013 -200566841 + HAL1 LINE L1 223 1719 -788 1569 197 3 7 chr2 50121013 50121297 -200566557 + AluJo SINE Alu 13 295 -17 2795 251 113 60 chr2 50121297 50121443 -200566411 + HAL1 LINE L1 1719 1856 -651 231 238 38 12 chr2 50121707 50121787 -200566067 + (TATATG)n Simple_repeat Simple_repeat 2 83 0 339 277 14 21 chr2 50122199 50122340 -200565514 + L1MC4a LINE L1 5762 5901 -1907 1955 145 83 3 chr2 50122870 50123207 -200564647 + MLT1A1 LTR MaLR 1 364 -1 6871 201 86 32 chr2 50123209 50123724 -200564130 + MLT1A1-int LTR MaLR 2 488 -1247 1405 72 0 0 chr2 50123724 50123904 -200563950 + L1PA8 LINE L1 5991 6170 -2 6871 201 86 32 chr2 50123904 50125029 -200562825 + MLT1A1-int LTR MaLR 488 1730 -5 1714 146 94 6 chr2 50125048 50125377 -200562477 + MLT1A1 LTR MaLR 1 358 -7 2013 138 3 3 chr2 50125681 50126011 -200561843 + AluSx SINE Alu 3 332 0 338 228 112 0 chr2 50127020 50127135 -200560719 - MIR3 SINE MIR 0 208 79 3177 156 57 42 chr2 50127854 50128093 -200559761 + L1MB3 LINE L1 5443 5677 -506 1607 141 0 0 chr2 50128093 50128320 -200559534 + AluJb SINE Alu 86 312 0 3177 156 57 42 chr2 50128320 50128764 -200559090 + L1MB3 LINE L1 5677 6136 -47 1071 59 0 0 chr2 50128763 50128939 -200558915 + L1PA3 LINE L1 5997 6172 0 * 211 122 41 0 chr2 50129093 50129142 -200558712 + CT-rich Low_complexity Low_complexity 2 52 0 1792 142 9 69 chr2 50129199 50129517 -200558337 + AluJo SINE Alu 1 299 -13 218 303 59 50 chr2 50129602 50129721 -200558133 - L2 LINE L2 -177 3095 2976 5894 250 74 116 chr2 50129789 50132127 -200555727 - L2 LINE L2 -2 3311 1166 1703 165 179 3 chr2 50132127 50132491 -200555363 - MSTC LTR MaLR 0 428 1 5894 250 74 116 chr2 50132491 50133579 -200554275 - L2 LINE L2 -2147 1166 33 560 256 133 73 chr2 50133622 50134005 -200553849 - L2 LINE L2 -648 2666 2261 345 246 101 22 chr2 50134003 50134141 -200553713 + MIR SINE MIR 79 227 -35 * 1882 114 4 0 chr2 50135447 50135709 -200552145 + AluSq SINE Alu 1 263 -50 2036 139 3 0 chr2 50135713 50136008 -200551846 - AluSx SINE Alu -16 296 1 206 259 0 0 chr2 50136506 50136560 -200551294 - MIR3 SINE MIR -1 207 154 376 278 9 0 chr2 50136788 50136896 -200550958 + L1ME2 LINE L1 6015 6123 -41 3157 138 70 2 chr2 50137039 50137554 -200550300 - MER41C LTR ERV1 -4 550 1 26 50 0 0 chr2 50137661 50137701 -200550153 + AT_rich Low_complexity Low_complexity 1 40 0 278 149 21 0 chr2 50137824 50137871 -200549983 - MIR3 SINE MIR -51 157 110 271 355 14 7 chr2 50137884 50138022 -200549832 + L2 LINE L2 2712 2850 -464 2152 254 68 56 chr2 50138123 50139178 -200548676 - HAL1 LINE L1 -8 2499 1432 254 295 161 55 chr2 50139148 50139275 -200548579 - HAL1 LINE L1 -1554 953 841 * 3456 106 17 94 chr2 50139275 50139925 -200547929 + MER4A LTR ERV1 1 600 0 254 295 161 55 chr2 50139925 50140414 -200547440 - HAL1 LINE L1 -1666 841 272 439 354 84 54 chr2 50140554 50140887 -200546967 - L2 LINE L2 -1 3271 2929 301 244 176 59 chr2 50140891 50140949 -200546905 - L2 LINE L2 -1 3312 3262 1811 169 0 38 chr2 50140949 50141262 -200546592 - AluJo SINE Alu -11 301 1 301 244 176 59 chr2 50141262 50141441 -200546413 - L2 LINE L2 -51 3262 3047 2225 100 3 0 chr2 50141861 50142162 -200545692 - AluSg SINE Alu -8 302 1 23 0 0 0 chr2 50142585 50142608 -200545246 + AT_rich Low_complexity Low_complexity 1 23 0 4916 84 24 4 chr2 50143852 50144530 -200543324 + LTR8 LTR ERV1 1 691 0 361 281 126 7 chr2 50144695 50144830 -200543024 + MIR SINE MIR 2 152 -110 1799 204 16 78 chr2 50145116 50145689 -200542165 + MLT1F LTR MaLR 1 537 -5 22 35 0 0 chr2 50145874 50145903 -200541951 + AT_rich Low_complexity Low_complexity 1 29 0 752 240 16 31 chr2 50145921 50146113 -200541741 - MER5A DNA MER1_type 0 189 1 541 213 38 88 chr2 50146190 50146218 -200541636 + MIR SINE MIR 8 36 -226 2761 102 3 0 chr2 50146218 50146592 -200541262 - THE1C LTR MaLR 0 375 1 541 213 38 88 chr2 50146592 50146723 -200541131 + MIR SINE MIR 36 159 -103 289 217 72 0 chr2 50146736 50146805 -200541049 + MER91C DNA MER1_type 32 105 -35 1200 125 5 20 chr2 50146891 50147091 -200540763 + THE1A LTR MaLR 159 355 0 575 216 106 27 chr2 50147134 50147425 -200540429 + MSTD LTR MaLR 19 396 0 1400 197 62 31 chr2 50147851 50147940 -200539914 + L1MB8 LINE L1 5694 5779 -399 1333 211 117 83 chr2 50147940 50148460 -200539394 - MLT1F LTR MaLR 0 542 5 1400 197 62 31 chr2 50148460 50148787 -200539067 + L1MB8 LINE L1 5779 6123 -55 1409 216 65 51 chr2 50148808 50149322 -200538532 + L1MC4 LINE L1 6247 8042 0 409 254 35 0 chr2 50149504 50149618 -200538236 + MER5B DNA MER1_type 5 122 -56 2867 101 63 59 chr2 50149665 50150208 -200537646 - LTR10A LTR ERV1 -64 545 1 411 141 16 0 chr2 50150209 50150273 -200537581 + MER5B DNA MER1_type 114 178 0 381 241 0 23 chr2 50150289 50150376 -200537478 - MIR SINE MIR -110 152 68 21 0 0 0 chr2 50151171 50151192 -200536662 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr2 50151630 50151662 -200536192 + AT_rich Low_complexity Low_complexity 1 32 0 439 316 147 18 chr2 50152233 50152451 -200535403 - MIR SINE MIR -15 247 2 646 295 65 22 chr2 50153501 50153901 -200533953 + L1ME3A LINE L1 5532 5948 -222 29 70 0 0 chr2 50154222 50154279 -200533575 + AT_rich Low_complexity Low_complexity 1 57 0 2371 103 0 0 chr2 50154285 50154587 -200533267 + AluSg SINE Alu 1 302 -8 305 280 0 0 chr2 50154634 50154709 -200533145 + L2 LINE L2 3239 3313 0 23 54 0 0 chr2 50155991 50156028 -200531826 + AT_rich Low_complexity Low_complexity 1 37 0 225 254 18 18 chr2 50156308 50156363 -200531491 + MIR3 SINE MIR 144 198 -10 1604 122 139 23 chr2 50156605 50156908 -200530946 + MER44D DNA MER2_type 1 608 -1 564 280 110 59 chr2 50157755 50158498 -200529356 + HAL1b LINE L1 67 847 -501 2290 113 0 3 chr2 50158618 50158929 -200528925 - AluSx SINE Alu 0 312 3 625 241 7 0 chr2 50159124 50159265 -200528589 + L1MC5 LINE L1 6633 6774 -1187 632 80 23 0 chr2 50159268 50159356 -200528498 - MLT1B LTR MaLR 0 467 378 * 1094 215 4 9 chr2 50159352 50159585 -200528269 - MLT1B LTR MaLR -157 233 2 1395 210 54 130 chr2 50159586 50159665 -200528189 + L1MC5 LINE L1 6773 6856 -1105 2212 116 17 0 chr2 50159665 50159966 -200527888 + AluSx SINE Alu 1 306 -6 1395 210 54 130 chr2 50159966 50160699 -200527155 + L1MC5 LINE L1 6856 7523 -438 257 249 34 98 chr2 50160809 50161014 -200526840 + L1ME3A LINE L1 5972 6163 -7 2439 84 0 0 chr2 50162293 50162589 -200525265 - AluSx SINE Alu -16 296 1 222 261 226 9 chr2 50162589 50162704 -200525150 - L2 LINE L2 -5 3308 3169 425 198 10 0 chr2 50163015 50163116 -200524738 + (TA)n Simple_repeat Simple_repeat 1 102 0 312 303 18 18 chr2 50163128 50163237 -200524617 + L1MC4 LINE L1 6595 6703 -1339 241 179 0 30 chr2 50163238 50163293 -200524561 + (TATG)n Simple_repeat Simple_repeat 2 56 -10 1056 156 0 6 chr2 50163293 50163460 -200524394 - FRAM SINE Alu 0 166 1 241 179 0 30 chr2 50163460 50163471 -200524383 + (TATG)n Simple_repeat Simple_repeat 56 66 0 221 192 110 27 chr2 50164075 50164148 -200523706 + L2 LINE L2 3235 3313 0 249 33 0 0 chr2 50165476 50165506 -200522348 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 421 248 94 0 chr2 50165507 50165624 -200522230 - L2 LINE L2 -10 3303 3176 369 250 58 0 chr2 50166416 50166520 -200521334 - MIR SINE MIR -5 257 148 250 186 0 0 chr2 50267564 50267607 -200420247 - MER66B LTR ERV1 -146 340 298 1798 127 10 7 chr2 50269058 50269358 -200418496 - AluSg SINE Alu -7 303 3 1751 174 1 46 chr2 50269358 50269584 -200418270 + L1MC/D LINE L1 5023 5258 -984 2348 73 3 0 chr2 50269584 50269887 -200417967 - AluY SINE Alu -7 304 1 1751 174 1 46 chr2 50269887 50270171 -200417683 + L1MC/D LINE L1 5258 5474 -768 2160 106 10 0 chr2 50270171 50270474 -200417380 + AluSx SINE Alu 1 306 -6 1751 174 1 46 chr2 50270474 50270602 -200417252 + L1MC/D LINE L1 5474 5606 -636 5005 36 4 120 chr2 50270738 50271544 -200416310 + SVA Other Other 685 1401 0 2173 115 0 3 chr2 50271732 50272045 -200415809 + AluSx SINE Alu 1 312 0 198 306 12 71 chr2 50272307 50272392 -200415462 + MIR SINE MIR 26 105 -103 2083 134 0 0 chr2 50272467 50272763 -200415091 + AluSq SINE Alu 1 299 -14 183 42 0 0 chr2 50272763 50272787 -200415067 + (CAGGA)n Simple_repeat Simple_repeat 2 25 0 2083 134 0 0 chr2 50272787 50272803 -200415051 + AluSq SINE Alu 298 313 0 441 90 0 0 chr2 50272839 50272906 -200414948 + (GGGAA)n Simple_repeat Simple_repeat 2 68 0 631 253 56 9 chr2 50272973 50273249 -200414605 + MLT1H LTR MaLR 15 303 -246 258 216 62 21 chr2 50273288 50273391 -200414463 + MLT1F LTR MaLR 389 524 -43 295 111 93 0 chr2 50273400 50273454 -200414400 - L1MB3 LINE L1 -10 6173 6115 2011 107 0 23 chr2 50273474 50273773 -200414081 - AluSx SINE Alu -20 292 1 2331 151 5 0 chr2 50273775 50274158 -200413696 - L1MB3 LINE L1 -56 6127 5743 180 320 56 40 chr2 50274376 50274501 -200413353 + L2 LINE L2 3139 3265 -7 310 66 0 98 chr2 50275154 50275235 -200412619 + L1PA16 LINE L1 6104 6178 0 340 279 25 16 chr2 50275537 50275659 -200412195 + MIR SINE MIR 79 201 -61 242 116 23 0 chr2 50275662 50275705 -200412149 + (TA)n Simple_repeat Simple_repeat 2 45 0 2060 123 7 3 chr2 50275735 50276036 -200411818 - AluSq SINE Alu -9 304 3 2175 106 6 3 chr2 50276412 50276723 -200411131 - AluSx SINE Alu 0 312 1 305 248 171 29 chr2 50277129 50277234 -200410620 + MIR3 SINE MIR 35 154 -54 2065 116 3 3 chr2 50277368 50277679 -200410175 + AluSx SINE Alu 1 311 -1 381 347 18 18 chr2 50278012 50278182 -200409672 + L3 LINE CR1 1047 1216 -361 560 299 102 34 chr2 50278209 50278503 -200409351 - L3 LINE CR1 -25 1552 1239 273 322 25 17 chr2 50278901 50279019 -200408835 - MIR3 SINE MIR -9 199 81 194 233 0 23 chr2 50279151 50279194 -200408660 - L2 LINE L2 -1 3271 3230 771 161 0 16 chr2 50279302 50279426 -200408428 + FLAM_C SINE Alu 1 122 -21 232 337 162 23 chr2 50279793 50280102 -200407752 - L2 LINE L2 -371 2943 2592 2116 121 0 3 chr2 50281321 50281634 -200406220 + AluSx SINE Alu 1 312 0 2067 133 0 0 chr2 50282337 50282638 -200405216 + AluSx SINE Alu 2 302 -10 1174 296 6 104 chr2 50282893 50283228 -200404626 + AluSx SINE Alu 1 302 0 1892 146 3 0 chr2 50283285 50283579 -200404275 - AluSx SINE Alu -17 295 1 728 272 22 11 chr2 50283705 50283889 -200403965 - MIR SINE MIR -66 196 11 2070 112 3 50 chr2 50284479 50284801 -200403053 - AluSq SINE Alu -6 307 1 1862 135 3 14 chr2 50284838 50285135 -200402719 - AluSx SINE Alu -18 294 1 2920 157 66 17 chr2 50285229 50285758 -200402096 - MER21A LTR ERV1 0 931 377 1026 77 118 24 chr2 50285813 50285982 -200401872 - MER21A LTR ERV1 -746 185 1 1422 142 104 19 chr2 50286439 50286699 -200401155 + AluSg SINE Alu 10 291 -19 597 260 134 89 chr2 50286724 50286985 -200400869 + L1 LINE L1 2961 3209 -2937 1754 159 0 3 chr2 50286985 50287275 -200400579 + AluJo SINE Alu 1 289 -23 1674 147 3 63 chr2 50287285 50287604 -200400250 + AluSx SINE Alu 1 300 -12 597 260 134 89 chr2 50287604 50287946 -200399908 + L1 LINE L1 3217 3542 -2604 1932 122 7 16 chr2 50287946 50288250 -200399604 + AluSg SINE Alu 1 301 -9 597 260 134 89 chr2 50288250 50288323 -200399531 + L1 LINE L1 3542 3610 -2536 2196 115 0 3 chr2 50288323 50288636 -200399218 - AluSx SINE Alu 0 312 1 597 260 134 89 chr2 50288636 50289368 -200398486 + L1 LINE L1 3610 4446 -1700 564 254 62 23 chr2 50289577 50289631 -200398223 - MIR SINE MIR 0 262 212 2289 105 0 0 chr2 50289631 50289936 -200397918 - AluSx SINE Alu -6 306 2 564 254 62 23 chr2 50289936 50290058 -200397796 - MIR SINE MIR -50 212 79 1851 143 3 3 chr2 50290098 50290398 -200397456 - AluJb SINE Alu -12 300 1 577 121 55 0 chr2 50290549 50290640 -200397214 - AluS SINE Alu -217 96 1 958 216 153 0 chr2 50291421 50291662 -200396192 - AluSx SINE Alu -30 282 5 23 0 0 0 chr2 50291715 50291738 -200396116 + AT_rich Low_complexity Low_complexity 1 23 0 501 291 200 5 chr2 50291762 50291972 -200395882 + MIR SINE MIR 12 262 0 2223 103 3 0 chr2 50292134 50292435 -200395419 + AluSp SINE Alu 1 302 -11 1728 130 98 3 chr2 50292511 50292796 -200395058 - AluSq SINE Alu -1 312 1 2052 90 7 0 chr2 50292800 50293101 -200394753 - AluSg SINE Alu 0 303 1 707 197 8 0 chr2 50293103 50293230 -200394624 - AluJo/FLAM SINE Alu -173 129 2 387 0 0 0 chr2 50293812 50293855 -200393999 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 1890 118 4 4 chr2 50293855 50294135 -200393719 - AluSx SINE Alu -32 280 1 357 109 0 0 chr2 50296024 50296079 -200391775 + (GGA)n Simple_repeat Simple_repeat 3 57 0 2220 78 3 0 chr2 50296283 50296603 -200391251 - AluSp SINE Alu 0 321 1 2599 186 10 8 chr2 50296603 50297119 -200390735 + L1MB1 LINE L1 5647 6163 -5 2790 144 26 49 chr2 50297431 50297573 -200390281 - L1MB7 LINE L1 0 6184 6040 2259 110 0 0 chr2 50297573 50297881 -200389973 - AluSx SINE Alu -4 308 1 2790 144 26 49 chr2 50297881 50298306 -200389548 - L1MB7 LINE L1 -144 6040 5630 259 158 0 70 chr2 50298490 50298547 -200389307 + L3b LINE CR1 1524 1576 -7 588 181 19 0 chr2 50298626 50298731 -200389123 - FLAM_A SINE Alu -8 134 28 2226 95 0 0 chr2 50299797 50300092 -200387762 - AluSg SINE Alu -15 295 1 221 203 94 0 chr2 50300585 50300649 -200387205 - MIR SINE MIR -109 99 30 2012 106 22 29 chr2 50300818 50301130 -200386724 + AluSx SINE Alu 1 310 -2 2069 127 3 0 chr2 50301621 50301921 -200385933 - AluSx SINE Alu -11 301 1 817 186 216 0 chr2 50302019 50302213 -200385641 + MER46A DNA MER2_type 1 236 0 586 275 81 45 chr2 50302732 50302954 -200384900 - MIR SINE MIR -5 257 28 2056 107 30 0 chr2 50304271 50304571 -200383283 + AluSx SINE Alu 1 309 -3 1906 168 106 23 chr2 50305003 50305390 -200382464 + MER67A LTR ERV1 1 419 -124 1150 88 0 0 chr2 50305391 50305539 -200382315 + AluSq/x SINE Alu 1 148 -165 1914 94 0 0 chr2 50305539 50305793 -200382061 + AluSx SINE Alu 42 295 -17 836 164 7 7 chr2 50305794 50305934 -200381920 + MER67A LTR ERV1 404 543 0 279 146 73 0 chr2 50306125 50306180 -200381674 + MIR SINE MIR 110 168 -94 909 170 0 0 chr2 50306468 50306615 -200381239 + MLT1A1 LTR MaLR 1 147 -218 2524 55 0 0 chr2 50306622 50306931 -200380923 + AluY SINE Alu 1 309 -2 2269 109 0 0 chr2 50306941 50307252 -200380602 + AluSx SINE Alu 1 311 -1 649 124 8 16 chr2 50307269 50307390 -200380464 + (GGAGAA)n Simple_repeat Simple_repeat 3 122 0 1490 17 0 6 chr2 50307390 50307568 -200380286 + (GAA)n Simple_repeat Simple_repeat 3 179 0 858 196 101 11 chr2 50307593 50307772 -200380082 + MLT1A1 LTR MaLR 160 354 -11 1534 194 9 19 chr2 50307975 50308290 -200379564 + AluSx SINE Alu 1 312 0 355 311 160 22 chr2 50309298 50309523 -200378331 + MIR SINE MIR 2 257 -5 2238 103 0 0 chr2 50309813 50310114 -200377740 + AluSx SINE Alu 1 301 -11 1149 196 15 0 chr2 50310219 50310423 -200377431 + MER20 DNA MER1_type 1 207 -12 513 309 34 34 chr2 50312235 50312385 -200375469 + MIR SINE MIR 7 159 -103 1884 186 25 6 chr2 50312385 50312740 -200375114 + MLT1A1 LTR MaLR 4 365 0 513 309 34 34 chr2 50312740 50312793 -200375061 + MIR SINE MIR 158 210 -52 1433 145 40 0 chr2 50312835 50313062 -200374792 - MER46A DNA MER2_type 0 236 1 2088 102 7 16 chr2 50313726 50314031 -200373823 - AluSp SINE Alu -10 303 2 4052 85 28 32 chr2 50314243 50315255 -200372599 + SVA Other Other 252 868 -592 7519 67 6 2 chr2 50315363 50316333 -200371521 + L1PA6 LINE L1 3544 4517 -1629 6998 56 2 10 chr2 50316328 50317596 -200370258 + L1PA6 LINE L1 4895 6154 0 458 264 85 50 chr2 50317811 50318012 -200369842 - L2 LINE L2 -2 3311 3104 1313 285 53 9 chr2 50318036 50318623 -200369231 - L2 LINE L2 0 3313 2704 284 253 0 48 chr2 50320427 50320510 -200367344 + GA-rich Low_complexity Low_complexity 6 84 0 2157 51 65 4 chr2 50320738 50321014 -200366840 + AluY SINE Alu 1 293 -18 21 0 0 0 chr2 50321016 50321037 -200366817 + AT_rich Low_complexity Low_complexity 1 21 0 722 229 51 40 chr2 50321865 50322118 -200365736 + MER112 DNA MER1_type 1 256 0 459 358 67 27 chr2 50322375 50322705 -200365149 - L2 LINE L2 -15 3257 2915 219 255 155 25 chr2 50322744 50322944 -200364910 - L2 LINE L2 -463 2851 2626 3288 141 95 8 chr2 50323839 50324440 -200363414 - L1PA16 LINE L1 -1 6165 5513 1457 173 112 37 chr2 50324442 50324917 -200362937 + L1PA16 LINE L1 5026 5536 -629 613 266 25 13 chr2 50327676 50327834 -200360020 - MER5A DNA MER1_type -29 160 1 378 323 68 19 chr2 50327838 50327999 -200359855 + MIR3 SINE MIR 6 174 -34 2415 96 0 0 chr2 50327999 50328300 -200359554 - AluSx SINE Alu -11 301 1 481 370 77 47 chr2 50328921 50329324 -200358530 - L2 LINE L2 -2 3270 2856 726 300 49 7 chr2 50329355 50329591 -200358263 - MIR SINE MIR -16 246 4 347 336 44 50 chr2 50329597 50329851 -200358003 - L2 LINE L2 -469 2845 2592 2206 105 3 3 chr2 50329851 50330156 -200357698 + AluSc SINE Alu 1 305 -4 347 336 44 50 chr2 50330156 50330199 -200357655 - L2 LINE L2 -722 2592 2550 330 289 0 11 chr2 50330645 50330735 -200357119 + L1MC4 LINE L1 6615 6703 -1339 310 227 0 13 chr2 50330705 50330780 -200357074 + L1MCa LINE L1 1995 2068 -4358 * 200 206 0 0 chr2 50330780 50330814 -200357040 + (TATATG)n Simple_repeat Simple_repeat 5 38 0 864 213 164 4 chr2 50332310 50332578 -200355276 + MER5C DNA MER1_type 12 322 -2 1141 143 77 0 chr2 50332588 50332770 -200355084 - MER3 DNA MER1_type -1 208 13 31 58 0 0 chr2 50333042 50333094 -200354760 + AT_rich Low_complexity Low_complexity 1 52 0 430 323 116 17 chr2 50333243 50333475 -200354379 - MIR SINE MIR -6 256 2 1445 193 75 59 chr2 50333783 50334207 -200353647 - L1ME2 LINE L1 -13 6151 5721 2041 138 0 20 chr2 50334830 50335134 -200352720 + AluJo SINE Alu 1 298 -14 1709 180 10 7 chr2 50335612 50335635 -200352219 - AluJb SINE Alu -11 301 280 198 0 0 0 chr2 50335635 50335657 -200352197 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1709 180 10 7 chr2 50335657 50335933 -200351921 - AluJb SINE Alu -32 280 1 23 0 0 0 chr2 50335933 50335956 -200351898 + AT_rich Low_complexity Low_complexity 1 23 0 855 161 0 7 chr2 50337153 50337290 -200350564 + AluJb SINE Alu 1 136 -176 397 169 0 42 chr2 50337411 50337529 -200350325 + G-rich Low_complexity Low_complexity 5 117 0 573 218 44 83 chr2 50337887 50338116 -200349738 - MER112 DNA MER1_type -40 220 1 280 296 91 0 chr2 50340632 50340720 -200347134 - L2 LINE L2 -1 3271 3176 275 311 0 11 chr2 50340765 50340855 -200346999 - L2 LINE L2 -81 3232 3144 573 287 39 6 chr2 50340866 50341089 -200346765 - L2 LINE L2 -279 3034 2804 288 0 0 0 chr2 50341823 50341855 -200345999 + (CA)n Simple_repeat Simple_repeat 2 33 0 1634 255 155 26 chr2 50341856 50342539 -200345315 + L2 LINE L2 2328 3092 -221 403 297 91 35 chr2 50342550 50342977 -200344877 + L1MC4a LINE L1 4566 5016 -1130 215 127 0 18 chr2 50342980 50343035 -200344819 + (TA)n Simple_repeat Simple_repeat 2 55 0 317 227 7 15 chr2 50343225 50343356 -200344498 + L1MC4a LINE L1 5260 5390 -954 893 244 122 26 chr2 50343391 50343736 -200344118 + L1MC4a LINE L1 5547 5924 -1884 183 177 13 25 chr2 50343920 50343999 -200343855 + (TA)n Simple_repeat Simple_repeat 2 79 0 368 286 188 0 chr2 50344462 50344595 -200343259 - MER5A DNA MER1_type 0 189 32 237 189 0 0 chr2 50344622 50344659 -200343195 + tRNA-Met-i tRNA tRNA 1 37 -38 1684 189 41 0 chr2 50345478 50345795 -200342059 + L1MB8 LINE L1 5402 5731 -453 269 223 39 78 chr2 50345800 50345903 -200341951 + LTR48B LTR ERV1 4 102 -542 * 1208 207 89 75 chr2 50345877 50346182 -200341672 + MER39 LTR ERV1 261 575 -132 2186 89 34 0 chr2 50346182 50346474 -200341380 + AluY SINE Alu 1 302 -9 1208 207 89 75 chr2 50346474 50346608 -200341246 + MER39 LTR ERV1 575 706 -1 2076 149 11 57 chr2 50346608 50347063 -200340791 + L1MB8 LINE L1 5729 6162 -16 1790 182 0 3 chr2 50348335 50348642 -200339212 + AluSx SINE Alu 6 311 -1 574 272 24 95 chr2 50348654 50348712 -200339142 + MIR SINE MIR 15 76 -186 2043 138 7 0 chr2 50348712 50349014 -200338840 + AluSx SINE Alu 1 304 0 574 272 24 95 chr2 50349014 50349209 -200338645 + MIR SINE MIR 76 262 0 1680 157 50 4 chr2 50349442 50349723 -200338131 - AluSx SINE Alu -18 294 1 25 0 0 0 chr2 50350290 50350315 -200337539 + AT_rich Low_complexity Low_complexity 1 25 0 1818 151 6 3 chr2 50350509 50350827 -200337027 + L1MB4 LINE L1 5860 6178 -2 2183 75 0 14 chr2 50350956 50351278 -200336576 - AluY SINE Alu 0 324 7 797 187 49 2 chr2 50351610 50351790 -200336064 + L1MB4 LINE L1 5817 6009 -171 296 200 41 27 chr2 50352300 50352420 -200335434 + L1ME LINE L1 36 120 -6303 604 200 154 39 chr2 50352483 50352575 -200335279 + L1ME LINE L1 1235 1315 -5108 1425 174 60 39 chr2 50352575 50352856 -200334998 + AluJo SINE Alu 1 287 -25 604 200 154 39 chr2 50352856 50353023 -200334831 + L1ME LINE L1 1315 1524 -4899 384 40 0 0 chr2 50353199 50353249 -200334605 + (CA)n Simple_repeat Simple_repeat 2 51 0 3833 256 78 32 chr2 50353261 50353364 -200334490 + L1M4 LINE L1 2133 2230 -3916 1912 117 0 18 chr2 50353364 50353638 -200334216 + AluSg SINE Alu 40 308 -2 3833 256 78 32 chr2 50353638 50354612 -200333242 + L1M4 LINE L1 2230 3157 -2989 1883 145 0 3 chr2 50354612 50354919 -200332935 + AluSx SINE Alu 1 306 0 3833 256 78 32 chr2 50354919 50355921 -200331933 + L1M4 LINE L1 3157 4387 -1759 1602 161 103 0 chr2 50355923 50356196 -200331658 + AluJo SINE Alu 3 303 -9 1727 178 0 7 chr2 50356396 50356682 -200331172 - AluJo SINE Alu -28 284 1 1505 154 8 8 chr2 50356755 50357015 -200330839 - L1PA15 LINE L1 -6 6159 5900 21 0 0 0 chr2 50357015 50357036 -200330818 + AT_rich Low_complexity Low_complexity 1 21 0 841 208 5 41 chr2 50357036 50357233 -200330621 + L1ME LINE L1 2025 2214 -4729 331 200 63 42 chr2 50357243 50357338 -200330516 + MER31A LTR ERV1 363 459 -26 1798 231 79 22 chr2 50357345 50358280 -200329574 + L1ME LINE L1 2366 3284 -3657 2169 118 16 0 chr2 50358280 50358586 -200329268 + AluSq SINE Alu 1 311 -2 2325 245 44 24 chr2 50358591 50358893 -200328961 + L1ME LINE L1 3767 4061 -2880 1805 164 13 7 chr2 50358893 50359197 -200328657 + AluSx SINE Alu 1 306 -6 2325 245 44 24 chr2 50359197 50360488 -200327366 + L1ME LINE L1 4061 5577 -1364 * 2771 137 24 0 chr2 50360482 50360934 -200326920 + L1PA16 LINE L1 2179 2641 -4208 1154 197 17 3 chr2 50360929 50361218 -200326636 + L1PA16 LINE L1 3939 4231 -2618 * 4410 168 17 149 chr2 50361214 50361508 -200326346 + L1MB3 LINE L1 4636 4967 -1216 5320 137 13 11 chr2 50361508 50362639 -200325215 + L1PA16 LINE L1 5724 6860 -9 4410 168 17 149 chr2 50362639 50364073 -200323781 + L1MB3 LINE L1 4967 6173 -10 294 279 0 0 chr2 50364139 50364218 -200323636 + L1ME LINE L1 6328 6406 -510 619 203 0 47 chr2 50364249 50364377 -200323477 + FLAM_C SINE Alu 1 122 -21 31 0 0 0 chr2 50364390 50364421 -200323433 + AT_rich Low_complexity Low_complexity 1 31 0 2284 221 38 65 chr2 50364478 50365060 -200322794 + L1ME1 LINE L1 4379 4933 -1213 1839 123 58 4 chr2 50365060 50365337 -200322517 + AluSx SINE Alu 3 294 -18 2284 221 38 65 chr2 50365337 50365581 -200322273 + L1ME1 LINE L1 4933 5182 -964 1650 203 158 68 chr2 50365592 50365793 -200322061 + L1ME1 LINE L1 5500 5682 -484 1864 105 94 14 chr2 50365793 50366079 -200321775 - AluSx SINE Alu -3 309 1 1650 203 158 68 chr2 50366079 50366479 -200321375 + L1ME1 LINE L1 5682 6155 -11 2206 75 41 0 chr2 50366494 50366789 -200321065 - AluY SINE Alu -4 307 1 1149 123 0 0 chr2 50366897 50367052 -200320802 - AluSq SINE Alu -158 155 1 23 0 0 0 chr2 50367926 50367949 -200319905 + AT_rich Low_complexity Low_complexity 1 23 0 509 259 72 0 chr2 50368956 50369122 -200318732 + MER5B DNA MER1_type 1 178 0 464 279 188 19 chr2 50369719 50369927 -200317927 - MIR SINE MIR -8 254 12 1007 137 22 0 chr2 50370098 50370280 -200317574 + L1MB4 LINE L1 5800 5985 -195 359 327 161 23 chr2 50370651 50370868 -200316986 - MIR SINE MIR -4 258 12 21 0 0 0 chr2 50371532 50371553 -200316301 + AT_rich Low_complexity Low_complexity 1 21 0 637 115 10 0 chr2 50372083 50372187 -200315667 + L1MB2 LINE L1 6065 6169 -2 315 151 0 0 chr2 50373022 50373075 -200314779 + L1ME4a LINE L1 5969 6021 -100 21 36 0 0 chr2 50373115 50373143 -200314711 + AT_rich Low_complexity Low_complexity 1 28 0 2408 59 0 0 chr2 50373728 50374017 -200313837 + AluY SINE Alu 1 289 -22 767 290 40 15 chr2 50374942 50375266 -200312588 + L1MC/D LINE L1 5456 5787 -2021 1224 191 129 52 chr2 50375492 50375677 -200312177 - AluJo SINE Alu -19 293 79 2288 95 7 7 chr2 50375677 50375982 -200311872 + AluSx SINE Alu 1 305 -7 1224 191 129 52 chr2 50375982 50376068 -200311786 - AluJo SINE Alu -233 79 1 2340 103 0 3 chr2 50376802 50377103 -200310751 - AluSq SINE Alu -13 300 1 25 0 0 0 chr2 50377571 50377596 -200310258 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 50378790 50378818 -200309036 + AT_rich Low_complexity Low_complexity 1 28 0 10803 173 24 3 chr2 50378971 50381842 -200306012 - L1PA14 LINE L1 -3 6158 3235 1811 165 42 12 chr2 50381854 50382254 -200305600 - L1PA14 LINE L1 -2799 3347 2936 556 177 77 46 chr2 50382828 50382958 -200304896 - MER94 DNA DNA 0 134 1 1174 210 66 122 chr2 50382967 50383466 -200304388 + Charlie1a DNA MER1_type 1 471 -984 7578 181 4 8 chr2 50383469 50384819 -200303035 + L1PA15-16 LINE L1 13 1356 -5493 3191 176 39 36 chr2 50384815 50385270 -200302584 + L1PA15-16 LINE L1 2387 2839 -4010 * 2080 125 7 0 chr2 50385270 50385558 -200302296 + AluSx SINE Alu 6 295 -17 3191 176 39 36 chr2 50385558 50386204 -200301650 + L1PA15-16 LINE L1 2839 3523 -3326 2195 103 10 0 chr2 50387000 50387291 -200300563 + AluSg SINE Alu 6 299 -11 183 42 0 0 chr2 50387665 50387689 -200300165 + (CAAAAA)n Simple_repeat Simple_repeat 5 28 0 7926 205 15 32 chr2 50387716 50389897 -200297957 + L1 LINE L1 3552 5696 -1153 3380 121 25 23 chr2 50389899 50390422 -200297432 + LTR38B LTR ERV1 1 528 -83 2332 92 3 0 chr2 50390422 50390714 -200297140 - AluSg SINE Alu -17 293 1 3380 121 25 23 chr2 50390714 50390799 -200297055 + LTR38B LTR ERV1 528 611 0 5611 118 18 3 chr2 50390799 50391960 -200295894 + L1PA16 LINE L1 4992 6166 0 1454 317 216 7 chr2 50391966 50392530 -200295324 + Charlie1a DNA MER1_type 460 1141 -314 489 177 0 0 chr2 50392531 50392627 -200295227 + L1MA9 LINE L1 3474 3569 -2577 4562 200 22 23 chr2 50392629 50392796 -200295058 + L1MA9 LINE L1 4280 4446 -1866 1609 171 0 4 chr2 50392796 50393054 -200294800 + AluJb SINE Alu 35 291 -21 4562 200 22 23 chr2 50393054 50393753 -200294101 + L1MA9 LINE L1 4446 5144 -1168 1662 211 0 0 chr2 50393753 50394061 -200293793 + AluJo SINE Alu 1 308 0 4562 200 22 23 chr2 50394061 50395148 -200292706 + L1MA9 LINE L1 5144 6237 -75 252 0 0 0 chr2 50395148 50395176 -200292678 + (TCTA)n Simple_repeat Simple_repeat 4 31 0 4562 200 22 23 chr2 50395176 50395206 -200292648 + L1MA9 LINE L1 6237 6266 -46 828 146 174 35 chr2 50395225 50395513 -200292341 + Charlie1a DNA MER1_type 1125 1452 -3 3953 153 36 1 chr2 50395580 50396275 -200291579 - L1PA16 LINE L1 -22 6144 5426 1939 93 0 48 chr2 50396785 50397055 -200290799 - AluSx SINE Alu -13 299 43 25 0 0 0 chr2 50398125 50398150 -200289704 + AT_rich Low_complexity Low_complexity 1 25 0 2080 114 4 0 chr2 50398814 50399138 -200288716 - AluSg SINE Alu 0 325 1 2113 139 0 16 chr2 50400132 50400449 -200287405 - AluSx SINE Alu 0 312 1 741 174 45 13 chr2 50402267 50402422 -200285432 + MER5A DNA MER1_type 30 189 0 414 152 16 37 chr2 50402437 50402552 -200285302 - MER5B DNA MER1_type -7 171 1 1557 165 39 11 chr2 50402763 50402919 -200284935 - AluJb SINE Alu -25 287 118 192 40 0 0 chr2 50402919 50402944 -200284910 + (TG)n Simple_repeat Simple_repeat 2 26 0 1557 165 39 11 chr2 50402944 50403066 -200284788 - AluJb SINE Alu -194 118 1 464 146 0 0 chr2 50403947 50404029 -200283825 + MLT1F1 LTR MaLR 1 82 -460 284 0 0 27 chr2 50404074 50404111 -200283743 + (TCTCCC)n Simple_repeat Simple_repeat 1 36 0 9161 112 25 41 chr2 50404112 50405510 -200282344 + SVA Other Other 2 1377 -9 1232 276 62 12 chr2 50405519 50405951 -200281903 + MLT1F1 LTR MaLR 110 563 -4 854 178 7 7 chr2 50406196 50406342 -200281512 - FRAM SINE Alu -30 146 1 2270 99 13 0 chr2 50406810 50407113 -200280741 + AluSx SINE Alu 1 307 -5 1607 200 55 6 chr2 50408073 50408438 -200279416 + L1MDa LINE L1 34 416 -6124 1846 135 39 4 chr2 50408720 50409001 -200278853 + AluSx SINE Alu 1 291 -21 24 53 0 0 chr2 50409163 50409201 -200278653 + AT_rich Low_complexity Low_complexity 1 38 0 266 306 45 45 chr2 50409270 50409381 -200278473 + L2 LINE L2 3158 3268 -4 335 316 32 87 chr2 50409747 50410000 -200277854 - L2 LINE L2 -198 3074 2836 2090 154 0 0 chr2 50410938 50411250 -200276604 + AluSx SINE Alu 1 312 0 617 275 28 16 chr2 50411404 50411586 -200276268 + L2 LINE L2 1463 1646 -1668 1843 136 4 0 chr2 50411608 50411873 -200275981 - AluSx SINE Alu -46 266 1 2404 193 68 64 chr2 50411941 50412464 -200275390 + MER97a DNA MER1_type? 1 520 -374 2071 100 3 53 chr2 50412464 50412783 -200275071 - AluSx SINE Alu -9 303 1 219 36 0 0 chr2 50412785 50412813 -200275041 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2027 139 0 0 chr2 50412813 50413094 -200274760 - AluSx SINE Alu -31 281 1 2404 193 68 64 chr2 50413094 50413313 -200274541 + MER97a DNA MER1_type? 519 750 -144 1949 153 14 34 chr2 50413486 50413840 -200274014 + MER7A DNA MER2_type 1 345 -1 406 234 19 0 chr2 50414349 50414456 -200273398 + MER97b DNA MER1_type? 751 859 -194 254 215 123 0 chr2 50415058 50415123 -200272731 + L2 LINE L2 1719 1791 -1523 2068 127 0 7 chr2 50415131 50415422 -200272432 + AluSq SINE Alu 4 292 -21 1663 199 43 63 chr2 50415428 50415522 -200272332 + MER34 LTR ERV1 1 95 -447 2243 175 49 0 chr2 50415522 50415928 -200271926 + MSTB LTR MaLR 1 426 0 1663 199 43 63 chr2 50415928 50416386 -200271468 + MER34 LTR ERV1 95 542 0 2885 255 98 32 chr2 50416408 50417115 -200270739 + L2 LINE L2 1835 2494 -819 1759 158 50 36 chr2 50417115 50417475 -200270379 + MLT1A1 LTR MaLR 1 365 0 2885 255 98 32 chr2 50417475 50418121 -200269733 + L2 LINE L2 2494 3293 -20 236 165 0 89 chr2 50420245 50420273 -200267581 + LTR37A LTR ERV1 352 381 -45 2415 69 0 66 chr2 50420273 50420606 -200267248 - AluY SINE Alu 0 311 1 236 165 0 89 chr2 50420606 50420656 -200267198 + LTR37A LTR ERV1 381 423 -3 2067 112 7 13 chr2 50422222 50422527 -200265327 + AluSx SINE Alu 1 303 -9 27 0 0 0 chr2 50422675 50422702 -200265152 + AT_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr2 50423266 50423300 -200264554 + AT_rich Low_complexity Low_complexity 1 34 0 302 93 0 0 chr2 50424594 50424637 -200263217 - MADE1 DNA Mariner -37 43 1 676 232 81 52 chr2 50424650 50424922 -200262932 + L2 LINE L2 2994 3273 -40 1077 249 96 16 chr2 50425143 50425456 -200262398 - LTR16A LTR ERVL 0 450 113 335 49 0 0 chr2 50425754 50425795 -200262059 + MER4E LTR ERV1 654 694 -72 30 0 0 0 chr2 50425795 50425825 -200262029 + AT_rich Low_complexity Low_complexity 1 30 0 2248 102 0 3 chr2 50425960 50426254 -200261600 + AluSg SINE Alu 1 293 -17 906 150 0 8 chr2 50426460 50426593 -200261261 + AluSq/x SINE Alu 1 132 -180 1963 135 24 0 chr2 50426614 50426742 -200261112 + AluSx SINE Alu 1 124 -188 333 0 0 0 chr2 50426742 50426779 -200261075 + (TAA)n Simple_repeat Simple_repeat 2 38 0 1963 135 24 0 chr2 50426779 50426938 -200260916 + AluSx SINE Alu 124 295 -17 383 139 28 14 chr2 50427060 50427132 -200260722 + MER103 DNA DNA 14 86 -80 185 94 31 0 chr2 50427416 50427448 -200260406 + (CA)n Simple_repeat Simple_repeat 1 33 0 27 0 0 0 chr2 50427972 50427999 -200259855 + AT_rich Low_complexity Low_complexity 1 27 0 50 95 0 0 chr2 50428043 50428191 -200259663 + AT_rich Low_complexity Low_complexity 1 148 0 180 228 18 88 chr2 50428620 50428677 -200259177 - L2 LINE L2 -18 3254 3202 216 0 0 0 chr2 50428714 50428738 -200259116 + (TG)n Simple_repeat Simple_repeat 2 25 0 486 200 32 32 chr2 50429347 50429472 -200258382 + MIR SINE MIR 96 220 -42 215 205 0 0 chr2 50430373 50430412 -200257442 + CT-rich Low_complexity Low_complexity 1 39 0 24 32 0 0 chr2 50430661 50430692 -200257162 + AT_rich Low_complexity Low_complexity 1 31 0 1447 168 8 19 chr2 50430721 50430977 -200256877 + AluJb SINE Alu 2 254 -58 248 266 43 53 chr2 50431154 50431248 -200256606 + MER5A DNA MER1_type 10 102 -87 2104 118 0 0 chr2 50431785 50432092 -200255762 + AluSg SINE Alu 1 307 0 362 342 158 7 chr2 50432176 50432328 -200255526 - MER5B DNA MER1_type 0 178 4 408 278 48 117 chr2 50432833 50433106 -200254748 + L2 LINE L2 3019 3272 0 2179 118 0 3 chr2 50433827 50434131 -200253723 + AluSx SINE Alu 1 303 -9 465 207 69 109 chr2 50434633 50434807 -200253047 - MER5B DNA MER1_type 0 178 12 2106 104 21 0 chr2 50434808 50435088 -200252766 + AluSx SINE Alu 1 286 -26 298 383 75 0 chr2 50435220 50435327 -200252527 + L2 LINE L2 3155 3269 -3 2245 102 7 0 chr2 50435327 50435630 -200252224 + AluSg SINE Alu 1 305 -5 201 132 0 0 chr2 50435634 50435672 -200252182 + (TGGA)n Simple_repeat Simple_repeat 1 38 0 1824 164 3 3 chr2 50435987 50436280 -200251574 + AluJb SINE Alu 1 293 -19 3005 225 45 34 chr2 50438896 50439167 -200248687 + L1 LINE L1 2189 2456 -3690 1939 143 0 3 chr2 50439167 50439454 -200248400 + AluSx SINE Alu 1 286 -26 3005 225 45 34 chr2 50439454 50440004 -200247850 + L1 LINE L1 2456 3019 -3127 460 95 0 0 chr2 50440004 50440067 -200247787 + Alu SINE Alu 238 300 -11 2178 127 0 3 chr2 50440070 50440370 -200247484 + AluSp SINE Alu 1 299 -14 294 262 0 0 chr2 50440371 50440432 -200247422 + L1 LINE L1 4912 4972 -1174 339 146 0 0 chr2 50440432 50440480 -200247374 + MER30 DNA MER1_type 1 48 -182 1846 146 16 19 chr2 50440484 50440792 -200247062 + AluSx SINE Alu 1 307 -5 486 108 0 0 chr2 50440795 50440869 -200246985 + (GGA)n Simple_repeat Simple_repeat 3 76 0 1135 139 61 0 chr2 50440874 50441054 -200246800 + MER30 DNA MER1_type 40 230 0 323 200 0 40 chr2 50441054 50441096 -200246758 + L1 LINE L1 4965 5004 -1142 1970 134 20 10 chr2 50441096 50441394 -200246460 + AluSx SINE Alu 1 301 -11 323 200 0 40 chr2 50441394 50441426 -200246428 + L1 LINE L1 5004 5036 -1110 2284 104 0 0 chr2 50441458 50441766 -200246088 + AluSq SINE Alu 1 308 -5 2977 204 20 39 chr2 50541833 50542787 -200145067 - L1 LINE L1 -3848 2940 2006 2169 300 110 7 chr2 50542918 50543744 -200144110 - L2 LINE L2 -345 2969 2059 5529 108 18 5 chr2 50543749 50544591 -200143263 + L1P3 LINE L1 517 1369 -5092 7871 104 89 4 chr2 50544721 50545924 -200141930 + THE1B-int LTR MaLR 276 1580 0 2104 130 22 33 chr2 50545924 50546292 -200141562 + THE1B LTR MaLR 1 364 0 1342 193 59 39 chr2 50546400 50546737 -200141117 - L1MD3 LINE L1 -246 7749 7406 361 250 46 0 chr2 50546743 50546851 -200141003 - MLT1F1 LTR MaLR -452 115 3 514 211 297 0 chr2 50546857 50547066 -200140788 - L1MD3 LINE L1 -721 7274 7004 333 369 8 16 chr2 50547096 50547218 -200140636 - MIR SINE MIR -70 138 18 214 344 0 0 chr2 50547873 50547937 -200139917 + L2 LINE L2 3204 3267 -5 22 35 0 0 chr2 50550243 50550272 -200137582 + AT_rich Low_complexity Low_complexity 1 29 0 394 337 70 21 chr2 50550952 50551139 -200136715 - L2 LINE L2 -18 3295 3100 26 64 0 0 chr2 50551203 50551250 -200136604 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 0 chr2 50551301 50551324 -200136530 + AT_rich Low_complexity Low_complexity 1 23 0 292 292 73 45 chr2 50551463 50551956 -200135898 + L1M4 LINE L1 2111 2617 -3529 263 266 46 18 chr2 50552061 50552170 -200135684 - L2 LINE L2 -88 3225 3114 234 0 0 0 chr2 50552379 50552405 -200135449 + (TA)n Simple_repeat Simple_repeat 2 27 0 504 123 13 148 chr2 50553985 50554044 -200133810 - L1MA9 LINE L1 -2 6310 6245 1894 142 3 24 chr2 50554044 50554339 -200133515 + AluSq SINE Alu 1 289 -24 504 123 13 148 chr2 50554339 50554434 -200133420 - L1MA9 LINE L1 -67 6245 6177 198 296 84 0 chr2 50555545 50555616 -200132238 - L2 LINE L2 -40 3232 3156 713 294 89 4 chr2 50555636 50555871 -200131983 - MIR SINE MIR 0 262 8 346 260 58 59 chr2 50556045 50556239 -200131615 - MIR SINE MIR -46 216 19 340 254 203 14 chr2 50556834 50556972 -200130882 - MER5A DNA MER1_type -9 180 17 1183 221 16 4 chr2 50560121 50560365 -200127489 - AluJb SINE Alu -65 247 1 440 188 73 137 chr2 50561655 50561889 -200125965 - L2 LINE L2 -1 3312 3094 275 279 57 32 chr2 50562255 50562413 -200125441 - L1ME4a LINE L1 -3 6118 5957 2301 45 3 17 chr2 50563555 50563888 -200123966 - AluY SINE Alu 0 329 1 426 304 135 35 chr2 50563947 50564259 -200123595 - L1MEc LINE L1 -4615 1695 1353 449 312 58 10 chr2 50564289 50564600 -200123254 - L1MEc LINE L1 -4867 1252 927 22 56 0 0 chr2 50565311 50565347 -200122507 + AT_rich Low_complexity Low_complexity 1 36 0 364 243 20 7 chr2 50565690 50565838 -200122016 + (TA)n Simple_repeat Simple_repeat 1 150 0 275 292 150 35 chr2 50566489 50566602 -200121252 + MIR3 SINE MIR 83 208 0 198 314 84 42 chr2 50567631 50567800 -200120054 - MIR SINE MIR -73 189 15 366 331 0 48 chr2 50569432 50569577 -200118277 + MIR SINE MIR 2 140 -68 187 324 74 78 chr2 50569847 50570091 -200117763 - L2 LINE L2 -23 3249 3007 237 235 0 20 chr2 50570195 50570246 -200117608 - L2 LINE L2 0 3272 3223 563 240 71 22 chr2 50570323 50570506 -200117348 - MIR SINE MIR 0 262 71 396 0 0 0 chr2 50571913 50571957 -200115897 + (CA)n Simple_repeat Simple_repeat 2 45 0 732 253 12 6 chr2 50572341 50572507 -200115347 - MIR3 SINE MIR -6 202 36 199 240 60 0 chr2 50572666 50572716 -200115138 - MIR SINE MIR -65 143 91 718 259 54 37 chr2 50573389 50573686 -200114168 - MLT1J1 LTR MaLR -142 304 3 442 281 123 14 chr2 50573707 50573853 -200114001 - MIR SINE MIR -78 184 23 271 320 0 0 chr2 50573921 50573996 -200113858 + MIR SINE MIR 187 261 -1 2130 141 0 0 chr2 50574356 50574661 -200113193 - AluSx SINE Alu -7 305 1 703 212 65 6 chr2 50575709 50575879 -200111975 + MIR SINE MIR 82 261 -1 21 57 0 0 chr2 50576668 50576703 -200111151 + AT_rich Low_complexity Low_complexity 1 35 0 259 338 0 0 chr2 50576923 50577003 -200110851 + L2 LINE L2 3225 3304 -9 200 250 294 49 chr2 50577185 50577369 -200110485 - L2 LINE L2 0 3272 3044 1620 149 24 0 chr2 50577688 50577936 -200109918 - AluSx SINE Alu -58 254 1 580 48 0 36 chr2 50577940 50578024 -200109830 - L1PA8 LINE L1 -1 6171 6091 200 306 12 35 chr2 50578410 50578495 -200109359 - L3 LINE CR1 -1 1576 1494 271 341 22 11 chr2 50578865 50578956 -200108898 - L2 LINE L2 0 3313 3222 389 277 200 0 chr2 50579228 50579358 -200108496 + MER5A DNA MER1_type 34 189 0 301 284 14 0 chr2 50579448 50579522 -200108332 - MIR3 SINE MIR -27 181 107 8912 46 107 0 chr2 50580093 50581369 -200106485 - L1P LINE L1 -4118 2028 617 760 51 0 0 chr2 50581363 50581461 -200106393 - L1P LINE L1 -6048 98 1 * 2582 184 23 37 chr2 50582240 50582806 -200105048 - MER74A LTR ERVL 0 558 1 667 273 93 65 chr2 50582807 50584260 -200103594 - L1ME3A LINE L1 -208 5962 4470 2106 132 3 0 chr2 50584501 50584797 -200103057 + AluSq SINE Alu 3 299 -14 203 184 0 20 chr2 50584807 50584856 -200102998 + GA-rich Low_complexity Low_complexity 2 49 0 215 182 0 45 chr2 50584864 50584908 -200102946 + polypurine Low_complexity Low_complexity 3 44 0 2476 78 0 3 chr2 50584985 50585293 -200102561 + AluY SINE Alu 1 307 -4 827 269 70 55 chr2 50585310 50586077 -200101777 + L1ME LINE L1 4298 5076 -1070 310 253 0 11 chr2 50586089 50586180 -200101674 + L1ME LINE L1 5755 5844 -326 248 154 0 0 chr2 50586695 50586734 -200101120 + L3 LINE CR1 1427 1465 -112 213 163 0 23 chr2 50588815 50588858 -200098996 + GA-rich Low_complexity Low_complexity 3 44 0 378 369 31 6 chr2 50588936 50589096 -200098758 - MIR3 SINE MIR -14 194 31 234 0 0 0 chr2 50589099 50589125 -200098729 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 293 296 37 9 chr2 50589679 50589787 -200098067 + MIR SINE MIR 81 191 -71 205 28 0 56 chr2 50590037 50590073 -200097781 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 392 309 63 45 chr2 50591123 50591329 -200096525 - MIR SINE MIR -12 250 42 1155 246 25 0 chr2 50591440 50591724 -200096130 - MER58B DNA MER1_type -50 291 1 284 323 0 11 chr2 50591965 50592058 -200095796 + MIR SINE MIR 133 224 -38 230 300 25 12 chr2 50592248 50592328 -200095526 + MIR SINE MIR 128 208 -54 193 250 0 42 chr2 50593248 50593296 -200094558 - MIR SINE MIR -139 69 24 29 0 0 0 chr2 50593616 50593645 -200094209 + AT_rich Low_complexity Low_complexity 1 29 0 189 216 0 0 chr2 50593993 50594030 -200093824 + L2 LINE L2 3018 3054 -218 377 283 40 10 chr2 50596887 50596986 -200090868 - L2 LINE L2 -11 3302 3201 529 230 106 12 chr2 50598444 50598605 -200089249 - HAL1 LINE L1 -1768 739 564 421 225 92 75 chr2 50598695 50598868 -200088986 - HAL1 LINE L1 -2081 426 251 410 192 108 59 chr2 50598965 50599168 -200088686 - HAL1 LINE L1 -2294 213 1 193 185 49 86 chr2 50599168 50599249 -200088605 + L2 LINE L2 1823 1900 -1414 1064 305 133 34 chr2 50599332 50600064 -200087790 + L2 LINE L2 1906 2709 -605 429 271 19 0 chr2 50600100 50600207 -200087647 - L2 LINE L2 -4 3309 3201 223 289 92 33 chr2 50600252 50600404 -200087450 + L2 LINE L2 2873 3033 -280 221 228 0 35 chr2 50600513 50600570 -200087284 + L2 LINE L2 3259 3313 0 328 294 188 6 chr2 50600616 50600786 -200087068 - MIR SINE MIR -5 257 57 2106 162 72 8 chr2 50601029 50601430 -200086424 + MSTA LTR MaLR 2 428 0 1339 109 0 22 chr2 50601944 50602128 -200085726 - AluSg/x SINE Alu -7 305 126 2287 167 14 41 chr2 50602128 50602565 -200085289 - MSTB LTR MaLR -1 425 1 2356 84 0 3 chr2 50602773 50603072 -200084782 + AluY SINE Alu 1 298 -13 322 156 73 62 chr2 50603188 50603284 -200084570 - MER103 DNA DNA -2 164 68 213 333 21 32 chr2 50603549 50603642 -200084212 - MIR SINE MIR -100 162 71 6884 240 42 15 chr2 50603805 50606639 -200081215 - L1MB7 LINE L1 -5 6990 3926 2072 152 55 24 chr2 50606639 50607059 -200080795 + Tigger2a DNA MER2_type 1 433 -1 6884 240 42 15 chr2 50607059 50607613 -200080241 - L1MB7 LINE L1 -3069 3926 3388 6832 55 5 0 chr2 50607619 50609283 -200078571 - L1PA3 LINE L1 -27 6128 4459 1269 288 52 53 chr2 50609292 50609871 -200077983 - L1MB7 LINE L1 -6274 585 8 210 171 0 0 chr2 50612139 50612180 -200075674 + (AATTG)n Simple_repeat Simple_repeat 2 42 0 196 309 15 0 chr2 50612299 50612367 -200075487 - MIR SINE MIR -138 124 56 639 254 108 5 chr2 50612408 50612593 -200075261 - MIR SINE MIR -16 246 43 308 284 99 62 chr2 50613404 50613615 -200074239 - L2 LINE L2 -791 2523 2305 247 404 58 21 chr2 50613719 50613907 -200073947 - L3 LINE CR1 -1337 240 46 1868 129 44 0 chr2 50614491 50614933 -200072921 + AluSx SINE Alu 1 454 0 252 0 0 0 chr2 50615124 50615152 -200072702 + (TG)n Simple_repeat Simple_repeat 2 29 0 2292 120 0 0 chr2 50615315 50615623 -200072231 - AluSx SINE Alu -1 311 4 404 335 32 13 chr2 50615865 50616023 -200071831 + MIR3 SINE MIR 20 180 -28 1654 188 31 99 chr2 50616128 50616553 -200071301 + MSTD LTR MaLR 1 396 0 1180 288 73 53 chr2 50617040 50617234 -200070620 - L2 LINE L2 0 3313 3124 1485 131 36 0 chr2 50617234 50617455 -200070399 - MER30 DNA MER1_type 0 230 2 1180 288 73 53 chr2 50617455 50618190 -200069664 - L2 LINE L2 -189 3124 2358 2173 96 0 42 chr2 50618377 50618690 -200069164 + AluSg1 SINE Alu 1 300 -9 894 147 5 76 chr2 50619014 50619171 -200068683 - L1MA6 LINE L1 0 6300 6160 1790 142 50 14 chr2 50619171 50619453 -200068401 - AluJb SINE Alu -20 292 1 894 147 5 76 chr2 50619453 50619506 -200068348 - L1MA6 LINE L1 -140 6160 6105 210 254 0 0 chr2 50619621 50619688 -200068166 + GA-rich Low_complexity Low_complexity 1 67 0 354 286 48 19 chr2 50619768 50619873 -200067981 - MIR SINE MIR -60 148 41 310 361 146 5 chr2 50621255 50621460 -200066394 - MIR SINE MIR -1 261 28 237 122 61 20 chr2 50621471 50621520 -200066334 + MIR SINE MIR 200 250 -12 360 238 65 53 chr2 50621925 50622053 -200065801 - MIR SINE MIR -62 146 16 2001 148 0 3 chr2 50622346 50622651 -200065203 - AluSx SINE Alu -8 304 1 582 288 45 0 chr2 50622676 50622874 -200064980 - MIR SINE MIR -21 241 35 248 0 31 0 chr2 50623230 50623262 -200064592 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 2963 140 21 4 chr2 50623575 50624061 -200063793 - MER41E LTR ERV1 -18 494 1 354 208 151 19 chr2 50625814 50625920 -200061934 + L1MA6 LINE L1 6181 6300 0 639 222 7 46 chr2 50626025 50626178 -200061676 - MIR SINE MIR -6 256 110 289 390 44 22 chr2 50626357 50626585 -200061269 + L2 LINE L2 2709 2941 -373 229 270 40 40 chr2 50626981 50627055 -200060799 + MIR SINE MIR 1 74 -188 288 229 16 0 chr2 50627235 50627296 -200060558 + L2 LINE L2 3246 3307 -6 326 365 25 13 chr2 50627970 50628129 -200059725 - MIR SINE MIR -41 221 61 185 330 106 0 chr2 50629982 50630076 -200057778 - L3 LINE CR1 -57 1520 1417 472 201 31 72 chr2 50630103 50630297 -200057557 - L1MC5 LINE L1 -51 7910 7725 364 270 40 72 chr2 50630593 50630787 -200057067 + MIR SINE MIR 52 237 -25 250 250 12 25 chr2 50631682 50631762 -200056092 - MLT1J2 LTR MaLR 0 450 372 192 397 66 8 chr2 50631964 50632085 -200055769 - L2 LINE L2 -12 3260 3133 662 313 92 4 chr2 50632256 50632496 -200055358 + MIR SINE MIR 1 261 -1 195 321 56 60 chr2 50633139 50633407 -200054447 + L2 LINE L2 2636 2902 -412 1816 214 94 5 chr2 50633983 50634428 -200053426 - MLT2B1 LTR ERVL 0 520 36 444 345 33 21 chr2 50634525 50634770 -200053084 + MIR SINE MIR 15 260 -2 200 365 168 15 chr2 50635126 50635400 -200052454 - L2 LINE L2 -337 2977 2662 285 128 0 0 chr2 50636017 50636064 -200051790 + (TC)n Simple_repeat Simple_repeat 1 47 0 300 310 13 0 chr2 50636359 50636465 -200051389 - MIR SINE MIR -43 165 56 1709 186 33 78 chr2 50639228 50639669 -200048185 - MLT1C LTR MaLR 0 467 49 2195 116 41 36 chr2 50639669 50640031 -200047823 - THE1B LTR MaLR 0 364 1 1709 186 33 78 chr2 50640031 50640078 -200047776 - MLT1C LTR MaLR -418 49 1 197 254 56 42 chr2 50640121 50640192 -200047662 + L2 LINE L2 2453 2524 -790 1314 156 28 45 chr2 50640761 50641083 -200046771 + MSTC LTR MaLR 1 379 -49 276 75 0 0 chr2 50641156 50641196 -200046658 + MSTC LTR MaLR 388 427 -1 613 344 93 13 chr2 50641422 50642023 -200045831 + L2 LINE L2 1528 2176 -1138 364 302 50 36 chr2 50642025 50642247 -200045607 - MLT1J LTR MaLR 0 511 287 389 157 65 4 chr2 50642719 50642970 -200044884 + (TA)n Simple_repeat Simple_repeat 1 266 0 195 370 55 14 chr2 50643336 50643409 -200044445 + L2 LINE L2 3116 3191 -81 362 161 54 54 chr2 50643426 50643556 -200044298 + MER53 DNA DNA 4 133 -56 21 36 0 0 chr2 50643673 50643701 -200044153 + AT_rich Low_complexity Low_complexity 1 28 0 323 238 19 9 chr2 50644211 50644316 -200043538 + L1ME1 LINE L1 1190 1295 -5114 436 278 53 29 chr2 50644325 50644542 -200043312 + L1ME1 LINE L1 1456 1681 -4725 2586 145 31 14 chr2 50644542 50644963 -200042891 - MSTA LTR MaLR 0 428 1 436 278 53 29 chr2 50644963 50644990 -200042864 + L1ME1 LINE L1 1681 1706 -4700 4004 199 26 7 chr2 50645017 50646579 -200041275 - L1MB7 LINE L1 -16 6168 4581 908 235 102 23 chr2 50646581 50647024 -200040830 - L1MB7 LINE L1 -2734 3412 2935 * 1164 252 104 33 chr2 50647023 50647747 -200040107 + L1ME1 LINE L1 1700 2544 -3862 2205 121 0 7 chr2 50647747 50648054 -200039800 + AluSx SINE Alu 1 305 -7 1164 252 104 33 chr2 50648054 50648450 -200039404 + L1ME1 LINE L1 2544 2910 -3496 * 3930 242 55 38 chr2 50648444 50648678 -200039176 + L1ME1 LINE L1 3879 4108 -2318 2211 122 3 0 chr2 50648678 50648989 -200038865 + AluSx SINE Alu 1 312 0 3930 242 55 38 chr2 50648989 50650047 -200037807 + L1ME1 LINE L1 4108 5147 -1279 1812 164 25 0 chr2 50650047 50650327 -200037527 + AluJb SINE Alu 1 287 -25 3930 242 55 38 chr2 50650327 50651481 -200036373 + L1ME1 LINE L1 5147 6370 -56 336 48 0 0 chr2 50651483 50651525 -200036329 + (CA)n Simple_repeat Simple_repeat 2 43 0 187 226 60 60 chr2 50651575 50651659 -200036195 + MIR SINE MIR 173 256 -6 189 0 0 0 chr2 50652535 50652556 -200035298 + (TTATA)n Simple_repeat Simple_repeat 3 23 0 184 183 67 67 chr2 50652944 50653004 -200034850 - L3 LINE CR1 -605 972 913 581 282 51 23 chr2 50653482 50653698 -200034156 + MIR SINE MIR 24 245 -17 185 374 66 0 chr2 50653722 50653813 -200034041 + L2 LINE L2 3107 3203 -69 442 305 86 7 chr2 50654074 50654353 -200033501 - L1MEd LINE L1 -1984 5183 4883 1925 110 7 23 chr2 50654580 50654879 -200032975 + THE1B LTR MaLR 71 364 0 10391 105 33 12 chr2 50654879 50656427 -200031427 + THE1B-int LTR MaLR 1 1580 0 2193 116 56 31 chr2 50656427 50656782 -200031072 + THE1B LTR MaLR 1 364 0 232 287 39 35 chr2 50656790 50657020 -200030834 - L1MEd LINE L1 -2547 4620 4390 1604 184 7 40 chr2 50657031 50657330 -200030524 + AluJb SINE Alu 9 297 -15 365 257 87 73 chr2 50657374 50657580 -200030274 - L1MEd LINE L1 -2828 4339 4131 5996 150 34 27 chr2 50657633 50659835 -200028019 - L1MA5A LINE L1 -2 6295 4059 461 263 16 49 chr2 50660467 50660710 -200027144 - L1MEd LINE L1 -3047 4120 3886 1979 194 55 0 chr2 50660958 50661355 -200026499 + MSTB1 LTR MaLR 14 432 0 267 235 39 10 chr2 50661505 50661607 -200026247 - HAL1 LINE L1 -875 1632 1528 347 282 17 46 chr2 50661722 50661896 -200025958 - L1MEd LINE L1 -4866 2291 2123 569 265 29 0 chr2 50662027 50662197 -200025657 - L1MEd LINE L1 -5942 1215 1041 1343 250 68 60 chr2 50663302 50663885 -200023969 - L2 LINE L2 0 3313 2733 952 305 39 41 chr2 50663907 50664343 -200023511 - L2 LINE L2 -1554 1760 1326 493 338 56 7 chr2 50664348 50664594 -200023260 + MIR SINE MIR 1 259 -3 347 354 18 0 chr2 50665732 50665845 -200022009 + MIR SINE MIR 35 149 -59 696 317 94 64 chr2 50666743 50667683 -200020171 + L2 LINE L2 1697 2664 -650 197 323 158 8 chr2 50667987 50668114 -200019740 + L2 LINE L2 2917 3062 -210 185 228 94 94 chr2 50668282 50668336 -200019518 + L2 LINE L2 2551 2604 -710 1137 204 98 77 chr2 50668336 50668724 -200019130 - MSTD LTR MaLR 0 396 1 185 228 94 94 chr2 50668724 50668849 -200019005 + L2 LINE L2 2603 2730 -584 225 0 0 0 chr2 50668876 50668901 -200018953 + (CA)n Simple_repeat Simple_repeat 2 26 0 3072 161 12 46 chr2 50668995 50669642 -200018212 - L1MA5 LINE L1 -9 6291 5667 3037 166 23 34 chr2 50669860 50670849 -200017005 - L1MA5 LINE L1 -638 5662 4683 1000 239 0 12 chr2 50670853 50671096 -200016758 - L1M4 LINE L1 -3460 3707 3468 474 169 6 22 chr2 50671108 50671291 -200016563 + (TA)n Simple_repeat Simple_repeat 1 180 0 304 321 0 18 chr2 50671324 50671436 -200016418 + L1MC4 LINE L1 6593 6702 -1340 881 207 12 24 chr2 50671441 50671692 -200016162 - L1M4 LINE L1 -3692 3475 3228 * 4213 217 20 2 chr2 50671682 50672558 -200015296 - L1M4 LINE L1 -5593 1575 684 238 158 0 0 chr2 50672558 50672596 -200015258 - L1M4 LINE L1 -6411 757 720 11142 188 34 31 chr2 50672613 50673293 -200014561 - L1M2 LINE L1 -630 6309 5633 519 123 0 12 chr2 50673293 50673374 -200014480 + MADE1 DNA Mariner 1 80 0 11142 188 34 31 chr2 50673374 50673734 -200014120 - L1M2 LINE L1 -1306 5633 5276 1452 187 47 23 chr2 50673734 50674033 -200013821 - AluJo SINE Alu -1 311 6 11142 188 34 31 chr2 50674033 50674418 -200013436 - L1M2 LINE L1 -1663 5276 4894 2075 100 7 4 chr2 50674418 50674698 -200013156 - AluSc SINE Alu -28 281 1 11142 188 34 31 chr2 50674698 50676477 -200011377 - L1M2 LINE L1 -2045 4894 3101 252 0 0 0 chr2 50676477 50676505 -200011349 + (TA)n Simple_repeat Simple_repeat 2 29 0 2246 53 21 0 chr2 50677444 50677726 -200010128 - L1PA10 LINE L1 0 6168 5881 793 221 28 51 chr2 50677845 50678062 -200009792 + MER58A DNA MER1_type 13 224 0 511 290 27 16 chr2 50678821 50679007 -200008847 + MIR SINE MIR 47 234 -28 300 116 0 0 chr2 50679149 50679192 -200008662 - MIR3 SINE MIR -3 205 163 503 204 30 23 chr2 50679270 50679402 -200008452 + MER103 DNA DNA 1 133 -33 285 180 33 33 chr2 50679501 50679562 -200008292 - MIR SINE MIR -116 146 86 195 129 0 0 chr2 50679705 50679736 -200008118 + (TG)n Simple_repeat Simple_repeat 1 31 0 257 296 22 30 chr2 50680446 50680581 -200007273 + CT-rich Low_complexity Low_complexity 3 136 0 338 105 0 18 chr2 50680847 50680904 -200006950 + (TGGA)n Simple_repeat Simple_repeat 3 58 0 274 297 212 0 chr2 50681657 50681775 -200006079 + MIR SINE MIR 11 153 -109 1269 251 103 34 chr2 50681819 50682294 -200005560 - MLT1H LTR MaLR -24 525 18 694 184 81 75 chr2 50682614 50682788 -200005066 + MER45A DNA AcHobo 4 178 0 228 280 11 21 chr2 50683119 50683212 -200004642 + GA-rich Low_complexity Low_complexity 3 94 0 342 0 0 0 chr2 50683467 50683505 -200004349 + (TA)n Simple_repeat Simple_repeat 2 39 0 6449 207 20 29 chr2 50683509 50685717 -200002137 - L1M2 LINE L1 -3705 3083 883 324 350 25 0 chr2 50685745 50685865 -200001989 - MIR SINE MIR -74 188 66 216 317 37 0 chr2 50685972 50686054 -200001800 + MIR SINE MIR 91 175 -87 601 278 6 22 chr2 50687354 50687534 -200000320 - MER5B DNA MER1_type -1 177 1 475 337 0 21 chr2 50687611 50687801 -200000053 - L2 LINE L2 -431 2883 2698 409 245 68 0 chr2 50687820 50687983 -199999871 - L1M4 LINE L1 -2386 3760 3587 2682 201 80 41 chr2 50687990 50689144 -199998710 + L1ME1 LINE L1 4878 6077 -89 222 383 9 9 chr2 50689277 50689384 -199998470 - MIR SINE MIR -120 142 36 225 0 0 0 chr2 50690106 50690131 -199997723 + (TA)n Simple_repeat Simple_repeat 2 26 0 504 123 13 148 chr2 50691711 50691770 -199996084 - L1MA9 LINE L1 -2 6310 6245 1933 139 3 24 chr2 50691770 50692065 -199995789 + AluSq SINE Alu 1 289 -24 504 123 13 148 chr2 50692065 50692160 -199995694 - L1MA9 LINE L1 -67 6245 6177 198 296 84 0 chr2 50693271 50693342 -199994512 - L2 LINE L2 -40 3232 3156 713 294 89 4 chr2 50693362 50693597 -199994257 - MIR SINE MIR 0 262 8 326 266 59 59 chr2 50693771 50693965 -199993889 - MIR SINE MIR -46 216 19 340 254 203 14 chr2 50694560 50694698 -199993156 - MER5A DNA MER1_type -9 180 17 1183 221 16 4 chr2 50697846 50698090 -199989764 - AluJb SINE Alu -65 247 1 440 188 73 137 chr2 50699380 50699614 -199988240 - L2 LINE L2 -1 3312 3094 276 274 64 32 chr2 50699982 50700139 -199987715 - L1ME4a LINE L1 -3 6118 5957 2130 48 7 26 chr2 50701281 50701602 -199986252 - AluY SINE Alu 0 332 17 304 236 21 118 chr2 50702844 50702930 -199984924 + L3 LINE CR1 1165 1233 -344 650 281 35 10 chr2 50702930 50703129 -199984725 - MER63A DNA MER1_type -2 208 5 304 236 21 118 chr2 50703129 50703186 -199984668 + L3 LINE CR1 1233 1294 -283 264 231 34 34 chr2 50703561 50703678 -199984176 + A-rich Low_complexity Low_complexity 3 119 0 896 301 113 21 chr2 50703742 50704969 -199982885 + L1M4 LINE L1 2148 3487 -2659 207 204 0 0 chr2 50704986 50705040 -199982814 + (CA)n Simple_repeat Simple_repeat 1 54 0 442 266 77 7 chr2 50705364 50705507 -199982347 + L2 LINE L2 3161 3313 0 252 0 0 0 chr2 50705827 50705855 -199981999 + (A)n Simple_repeat Simple_repeat 1 28 0 341 297 69 51 chr2 50705927 50705992 -199981862 + MER5B DNA MER1_type 1 63 -115 1718 157 29 10 chr2 50705992 50706298 -199981556 + AluSq SINE Alu 1 312 -1 341 297 69 51 chr2 50706298 50706407 -199981447 + MER5B DNA MER1_type 63 178 0 468 308 30 8 chr2 50706493 50706727 -199981127 - Charlie8 DNA MER1_type -2146 271 33 4915 25 2 0 chr2 50706804 50707376 -199980478 - L1PA4 LINE L1 -5 6150 5578 377 0 0 0 chr2 50707376 50707420 -199980434 + L1P LINE L1 2704 2747 -3399 * 14452 33 2 0 chr2 50707418 50709266 -199978588 - L1PA4 LINE L1 -1994 4152 2301 299 375 19 10 chr2 50709500 50709604 -199978250 + MIR3 SINE MIR 9 113 -95 202 350 107 0 chr2 50709903 50710006 -199977848 + MIR SINE MIR 30 143 -119 1399 211 12 98 chr2 50710956 50711363 -199976491 - MLT1A2 LTR MaLR -2 372 1 639 87 0 0 chr2 50711565 50711669 -199976185 + (TA)n Simple_repeat Simple_repeat 2 105 0 751 176 138 6 chr2 50711802 50711961 -199975893 - MLT1A2 LTR MaLR -5 369 190 278 222 11 0 chr2 50711966 50712056 -199975798 + GA-rich Low_complexity Low_complexity 2 92 0 692 219 21 43 chr2 50712063 50712250 -199975604 - MLT1A2 LTR MaLR -191 183 1 220 353 129 7 chr2 50713344 50713483 -199974371 + MIR SINE MIR 20 175 -87 23175 34 1 0 chr2 50713506 50717093 -199970761 + L1PA2 LINE L1 2566 6154 -1 446 242 77 77 chr2 50717150 50717344 -199970510 + MIR SINE MIR 59 252 -10 209 211 0 0 chr2 50717351 50717389 -199970465 + (ATG)n Simple_repeat Simple_repeat 1 38 0 181 291 0 0 chr2 50718076 50718131 -199969723 - L2 LINE L2 -3 3269 3215 * 314 229 0 29 chr2 50718121 50718191 -199969663 + L2 LINE L2 3167 3234 -79 190 235 84 34 chr2 50718207 50718326 -199969528 - L2 LINE L2 -164 3149 3025 198 252 168 77 chr2 50718786 50718883 -199968971 - L2 LINE L2 -575 2739 2624 3348 96 11 2 chr2 50718883 50719332 -199968522 - MLT2A2 LTR ERVL 0 453 1 198 252 168 77 chr2 50719332 50719377 -199968477 - L2 LINE L2 -690 2624 2584 244 291 38 38 chr2 50720450 50720529 -199967325 + MIR SINE MIR 105 183 -79 201 297 72 54 chr2 50721731 50721842 -199966012 + L2 LINE L2 3143 3255 -17 183 237 137 92 chr2 50722291 50722354 -199965500 + MIR SINE MIR 47 106 -156 2253 138 11 13 chr2 50722354 50722730 -199965124 + THE1C LTR MaLR 1 375 0 183 237 137 92 chr2 50722730 50722797 -199965057 + MIR SINE MIR 106 183 -79 271 309 40 16 chr2 50722940 50723066 -199964788 - MIR SINE MIR -50 212 84 240 300 100 39 chr2 50723116 50723246 -199964608 - MIR SINE MIR -15 247 110 734 248 56 35 chr2 50723752 50723950 -199963904 + MIR SINE MIR 35 236 -26 352 291 27 18 chr2 50723998 50724108 -199963746 + MIR SINE MIR 88 198 -64 587 224 26 19 chr2 50725276 50725432 -199962422 - MER103 DNA DNA -3 163 7 299 295 109 38 chr2 50725497 50725680 -199962174 - L3 LINE CR1 -13 1564 1369 643 311 29 0 chr2 50725724 50725933 -199961921 + MIR SINE MIR 48 262 0 1770 219 137 74 chr2 50726122 50727063 -199960791 - Charlie7 DNA MER1_type -72 2540 1541 347 337 43 25 chr2 50727469 50727632 -199960222 - MIR SINE MIR -92 170 5 264 286 86 9 chr2 50727908 50728013 -199959841 - MIR SINE MIR -64 144 32 1379 206 33 20 chr2 50728235 50728813 -199959041 - MER82 DNA MER2_type 0 653 1 968 328 150 30 chr2 50731005 50732363 -199955491 - L2 LINE L2 -14 3258 1745 321 155 17 0 chr2 50732365 50732423 -199955431 + L1ME1 LINE L1 5864 5922 -244 1414 152 49 23 chr2 50732423 50732686 -199955168 + L1M1 LINE L1 17 286 -7279 879 276 12 12 chr2 50732685 50732935 -199954919 + L1ME1 LINE L1 5899 6148 -18 * 230 234 0 0 chr2 50734006 50734053 -199953801 - MLT1K LTR MaLR -329 259 213 1890 156 7 7 chr2 50735540 50735847 -199952007 + AluJb SINE Alu 1 307 -5 306 0 0 0 chr2 50737249 50737283 -199950571 + (TG)n Simple_repeat Simple_repeat 2 35 0 213 330 110 0 chr2 50737479 50737579 -199950275 - L2 LINE L2 -237 3035 2925 21 0 0 0 chr2 50737589 50737610 -199950244 + AT_rich Low_complexity Low_complexity 1 21 0 1984 134 3 26 chr2 50737615 50737928 -199949926 + AluY SINE Alu 5 310 -1 21 36 0 0 chr2 50738163 50738191 -199949663 + AT_rich Low_complexity Low_complexity 1 28 0 1890 154 50 31 chr2 50738789 50739108 -199948746 + L1PA15 LINE L1 5796 6124 -41 2964 6 0 0 chr2 50739108 50739423 -199948431 + AluYb8 SINE Alu 1 315 -3 1890 154 50 31 chr2 50739423 50739461 -199948393 + L1PA15 LINE L1 6124 6160 -5 225 94 0 0 chr2 50739984 50740016 -199947838 + (CAT)n Simple_repeat Simple_repeat 3 34 0 1021 178 81 19 chr2 50740436 50740694 -199947160 + MER58 DNA MER1_type 2147 2420 0 578 305 73 9 chr2 50742403 50742636 -199945218 - MIR SINE MIR -2 260 13 196 329 29 0 chr2 50742992 50743062 -199944792 + MER5A DNA MER1_type 26 97 -92 23 0 0 0 chr2 50743408 50743431 -199944423 + AT_rich Low_complexity Low_complexity 1 23 0 245 323 21 0 chr2 50743620 50743716 -199944138 + MIR SINE MIR 91 188 -74 194 220 54 119 chr2 50743783 50743951 -199943903 - L2 LINE L2 -72 3241 3085 445 320 27 13 chr2 50744277 50744427 -199943427 - MIR3 SINE MIR -55 153 2 234 0 0 0 chr2 50745289 50745315 -199942539 + (CA)n Simple_repeat Simple_repeat 1 26 0 652 256 181 30 chr2 50745316 50745586 -199942268 - LTR16A LTR ERVL -27 423 113 1577 170 15 0 chr2 50745699 50745958 -199941896 - AluJo SINE Alu -49 263 1 565 239 26 0 chr2 50745958 50746075 -199941779 - MER5A DNA MER1_type -69 120 1 206 298 128 11 chr2 50747336 50747430 -199940424 - L2 LINE L2 -3 3310 3206 184 289 0 0 chr2 50747659 50747704 -199940150 - L2 LINE L2 -1 3312 3268 1085 48 0 0 chr2 50748006 50748131 -199939723 - L1PA7 LINE L1 0 6154 6030 9705 89 5 2 chr2 50748131 50749463 -199938391 + L1P LINE L1 3146 4481 -1665 911 196 56 0 chr2 50749463 50749642 -199938212 - MLT2B3 LTR ERVL -34 520 332 962 157 21 38 chr2 50749750 50750063 -199937791 - MLT2B3 LTR ERVL -165 389 4 206 203 81 14 chr2 50751156 50751230 -199936624 - L2 LINE L2 -70 3243 3165 308 246 211 35 chr2 50751615 50751757 -199936097 - MLT1G LTR MaLR 0 595 429 219 218 0 0 chr2 50751813 50751868 -199935986 + (TG)n Simple_repeat Simple_repeat 1 55 0 612 293 107 11 chr2 50751910 50752173 -199935681 - MLT1G LTR MaLR -302 288 1 1340 277 126 2 chr2 50752806 50753283 -199934571 - L2 LINE L2 -735 2579 2044 497 220 59 21 chr2 50753306 50753492 -199934362 + L1M4 LINE L1 2422 2614 -3532 564 255 100 89 chr2 50753602 50753974 -199933880 - LTR33A LTR ERVL -109 414 1 1069 323 146 23 chr2 50753985 50754757 -199933097 - L2 LINE L2 -522 2792 1926 696 272 14 24 chr2 50755502 50755715 -199932139 - MIR SINE MIR -50 212 2 1907 163 0 10 chr2 50757722 50758023 -199929831 + AluJo SINE Alu 1 298 -14 449 321 184 0 chr2 50758916 50759128 -199928726 - MIR SINE MIR -8 254 4 426 243 78 10 chr2 50762721 50762824 -199925030 - MIR SINE MIR -122 140 31 189 0 0 0 chr2 50762848 50762869 -199924985 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 1757 203 159 53 chr2 50762899 50763485 -199924369 + MLT2F LTR ERVL 9 656 -7 333 315 128 20 chr2 50763517 50763720 -199924134 + MIR SINE MIR 17 241 -21 1396 192 44 0 chr2 50764135 50764431 -199923423 + MER33 DNA MER1_type 1 302 -22 443 253 165 16 chr2 50766129 50766311 -199921543 - MLT1L LTR MaLR -112 503 295 266 279 10 29 chr2 50766789 50766934 -199920920 + A-rich Low_complexity Low_complexity 1 142 0 1437 239 129 20 chr2 50767295 50767751 -199920103 - L2 LINE L2 0 3313 2808 342 308 59 44 chr2 50768141 50768321 -199919533 - MIR SINE MIR -62 200 19 468 293 191 41 chr2 50768972 50769266 -199918588 + MER115 DNA AcHobo 29 366 -327 222 402 43 0 chr2 50769499 50769663 -199918191 + L2 LINE L2 590 760 -2554 200 374 96 0 chr2 50769766 50769953 -199917901 + L2 LINE L2 2851 3055 -217 3457 181 37 3 chr2 50770372 50770990 -199916864 - MER39 LTR ERV1 -68 639 1 259 336 102 7 chr2 50771011 50771148 -199916706 - MIR SINE MIR -56 206 57 669 274 34 42 chr2 50771158 50771421 -199916433 - L2 LINE L2 -5 3308 3048 2175 130 10 0 chr2 50771887 50772195 -199915659 + AluSq SINE Alu 3 313 0 799 248 85 10 chr2 50773132 50773426 -199914428 + L1ME2 LINE L1 5015 5330 -816 * 2064 202 74 21 chr2 50773423 50773952 -199913902 + L1ME2 LINE L1 5601 6157 -7 359 258 138 41 chr2 50773968 50774236 -199913618 + L1M4 LINE L1 4316 4609 -1537 1900 98 0 42 chr2 50774306 50774571 -199913283 + AluSc SINE Alu 1 254 -55 304 304 67 42 chr2 50775003 50775311 -199912543 - HAL1b LINE L1 -860 488 236 329 301 59 46 chr2 50775342 50775495 -199912359 - L1MEd LINE L1 -5013 1106 952 1642 178 13 45 chr2 50776626 50776940 -199910914 + AluJo SINE Alu 1 304 -8 321 316 120 13 chr2 50778082 50778240 -199909614 - MIR3 SINE MIR -26 182 8 2382 82 7 0 chr2 50779400 50779693 -199908161 - AluSc SINE Alu -14 295 1 368 309 14 14 chr2 50780006 50780145 -199907709 - L2 LINE L2 -4 3309 3171 289 316 88 9 chr2 50780723 50780837 -199907017 - L2 LINE L2 0 3313 3191 2611 164 40 11 chr2 50781927 50782397 -199905457 + L1MC1 LINE L1 5850 6333 0 628 262 214 15 chr2 50782913 50783384 -199904470 - L2 LINE L2 -41 3272 2694 619 260 34 23 chr2 50783972 50784149 -199903705 + MIR3 SINE MIR 30 208 0 431 229 7 57 chr2 50784681 50784821 -199903033 + L1MC5 LINE L1 7807 7939 -22 929 250 18 44 chr2 50784900 50785128 -199902726 + MER58A DNA MER1_type 1 222 -2 992 166 45 30 chr2 50785267 50785466 -199902388 + MER3 DNA MER1_type 8 209 0 856 197 41 83 chr2 50785494 50785712 -199902142 + MER63A DNA MER1_type 2 210 0 231 114 0 0 chr2 50786590 50786625 -199901229 + (GGGA)n Simple_repeat Simple_repeat 2 36 0 1790 91 24 0 chr2 50786820 50787072 -199900782 - L1MA2 LINE L1 0 6304 6047 463 299 30 46 chr2 50787079 50787276 -199900578 - L2 LINE L2 -169 3103 2910 370 214 0 0 chr2 50787287 50787357 -199900497 - MER94 DNA DNA -3 131 62 327 275 83 18 chr2 50788744 50788853 -199899001 - MIR3 SINE MIR -1 207 92 1601 185 0 24 chr2 50789353 50789651 -199898203 + AluJo SINE Alu 7 297 -15 2473 78 0 0 chr2 50789662 50789968 -199897886 - AluY SINE Alu -5 306 1 253 259 37 12 chr2 50790890 50790971 -199896883 + MIR SINE MIR 132 214 -48 2376 87 3 0 chr2 50791278 50791577 -199896277 + AluSx SINE Alu 1 300 -12 217 336 45 27 chr2 50792458 50792568 -199895286 + L2 LINE L2 3143 3254 -18 401 316 104 14 chr2 50792658 50792870 -199894984 - MIR SINE MIR -10 252 22 2665 23 7 3 chr2 50793187 50793495 -199894359 + AluY SINE Alu 1 309 -2 233 338 0 0 chr2 50793556 50793630 -199894224 + MIR SINE MIR 66 139 -69 817 204 155 66 chr2 50793778 50794140 -199893714 - LTR37A LTR ERV1 -2 424 31 360 270 30 0 chr2 50794520 50794620 -199893234 + MER5A DNA MER1_type 10 112 -77 200 262 234 19 chr2 50794546 50794653 -199893201 - MER5A DNA MER1_type -24 165 36 * 450 215 21 62 chr2 50794691 50794835 -199893019 + MIR3 SINE MIR 60 197 -11 299 389 6 51 chr2 50795772 50795929 -199891925 - L2 LINE L2 0 3272 3123 189 286 143 75 chr2 50797030 50797163 -199890691 - L2 LINE L2 -357 2957 2834 1848 152 35 0 chr2 50797163 50797453 -199890401 - AluSx SINE Alu -12 300 1 189 286 143 75 chr2 50797453 50797571 -199890283 - L2 LINE L2 -480 2834 2689 15705 43 7 0 chr2 50799096 50801664 -199886190 - L1PA5 LINE L1 -9 6145 3564 1593 221 14 33 chr2 50802059 50802421 -199885433 + MLT1A1 LTR MaLR 11 365 0 8284 213 32 35 chr2 50802422 50804161 -199883693 + MLT1A1-int LTR MaLR 2 1735 0 1076 187 55 142 chr2 50804161 50804563 -199883291 + MLT1A2 LTR MaLR 1 367 -7 335 314 43 29 chr2 50805413 50805553 -199882301 + HAL1b LINE L1 47 188 -1160 517 163 31 97 chr2 50805554 50805799 -199882055 + MER89 LTR ERV1 1 327 -232 2171 59 24 3 chr2 50805810 50806097 -199881757 - L1PA4 LINE L1 -1255 4891 4599 7958 29 7 0 chr2 50806097 50807358 -199880496 + L1PA4 LINE L1 4884 6153 -2 189 0 0 0 chr2 50807389 50807410 -199880444 + (CAA)n Simple_repeat Simple_repeat 1 21 0 239 306 44 29 chr2 50808128 50808334 -199879520 + L1ME2 LINE L1 2247 2455 -3691 1831 259 108 58 chr2 50811019 50811901 -199875953 + L1ME2 LINE L1 5236 6161 -3 290 229 71 0 chr2 50811952 50812022 -199875832 + MLT1J1 LTR MaLR 372 446 0 356 202 112 0 chr2 50812022 50812111 -199875743 - MIR3 SINE MIR -34 174 76 38 0 0 0 chr2 50812392 50812430 -199875424 + AT_rich Low_complexity Low_complexity 1 38 0 2050 143 10 0 chr2 50813016 50813316 -199874538 - AluJb SINE Alu -9 303 1 1736 179 38 61 chr2 50813362 50813758 -199874096 + MLT1B LTR MaLR 4 390 0 22 35 0 0 chr2 50814102 50814131 -199873723 + AT_rich Low_complexity Low_complexity 1 29 0 229 227 0 0 chr2 50814138 50814182 -199873672 - MIR SINE MIR -1 261 218 930 246 54 4 chr2 50814301 50814577 -199873277 + LTR37A LTR ERV1 89 378 -48 275 229 57 0 chr2 50814585 50814655 -199873199 - MIR SINE MIR -108 154 81 186 250 177 94 chr2 50815263 50815359 -199872495 - MIR SINE MIR -86 176 73 2147 115 0 3 chr2 50815616 50815904 -199871950 - AluSq SINE Alu -26 287 1 183 342 25 13 chr2 50816009 50816088 -199871766 + L2 LINE L2 3141 3220 -93 984 197 40 27 chr2 50816588 50816811 -199871043 - MIR SINE MIR 0 262 37 187 189 0 0 chr2 50817533 50817570 -199870284 - MIR SINE MIR -10 252 216 352 247 210 6 chr2 50817802 50817964 -199869890 + MIR SINE MIR 49 243 -19 233 146 21 0 chr2 50819799 50819847 -199868007 + (TG)n Simple_repeat Simple_repeat 2 50 0 283 293 27 0 chr2 50819988 50820063 -199867791 - MIR SINE MIR -112 150 74 1317 138 0 5 chr2 50820081 50820276 -199867578 - AluSg/x SINE Alu -23 289 96 2885 91 11 5 chr2 50822987 50823360 -199864494 + THE1C LTR MaLR 1 375 0 330 293 72 50 chr2 50823887 50824068 -199863786 + MIR SINE MIR 62 246 -16 236 357 14 14 chr2 50825209 50825349 -199862505 - MIR SINE MIR -109 153 14 792 249 117 37 chr2 50825613 50825795 -199862059 + MLT1J2 LTR MaLR 64 230 -220 833 166 53 6 chr2 50825795 50825964 -199861890 + MER5B DNA MER1_type 2 178 0 792 249 117 37 chr2 50825964 50826144 -199861710 + MLT1J2 LTR MaLR 230 447 -3 1992 184 42 11 chr2 50826407 50826761 -199861093 - MLT1A1 LTR MaLR 0 365 1 394 200 45 64 chr2 50827868 50827978 -199859876 + MER91C DNA MER1_type 33 140 0 442 248 147 23 chr2 50828181 50828310 -199859544 + L2 LINE L2 3128 3272 0 496 253 73 40 chr2 50828320 50828470 -199859384 - L2 LINE L2 0 3313 3159 451 306 126 22 chr2 50828586 50828808 -199859046 + MIR SINE MIR 18 262 0 * 526 339 39 0 chr2 50828807 50828987 -199858867 - MIR SINE MIR -64 198 12 1681 51 0 0 chr2 50829582 50829778 -199858076 - L1PA3 LINE L1 -2 6153 5958 577 215 18 0 chr2 50830618 50830781 -199857073 + (TGGA)n Simple_repeat Simple_repeat 4 169 0 210 286 71 36 chr2 50831440 50831524 -199856330 - L2 LINE L2 0 3313 3227 199 354 71 18 chr2 50833006 50833119 -199854735 + MIR SINE MIR 51 169 -93 778 102 16 0 chr2 50833830 50833957 -199853897 + (GGAA)n Simple_repeat Simple_repeat 3 131 0 192 301 98 35 chr2 50835511 50835654 -199852200 + L2 LINE L2 2910 3061 -211 246 32 0 0 chr2 50835887 50835918 -199851936 + (CA)n Simple_repeat Simple_repeat 1 31 0 187 275 43 43 chr2 50836491 50836560 -199851294 + L2 LINE L2 3096 3164 -108 895 200 196 20 chr2 50837418 50837668 -199850186 + MER33 DNA MER1_type 31 324 0 229 337 43 78 chr2 50837704 50837959 -199849895 + L2 LINE L2 3027 3272 0 1161 102 102 5 chr2 50838431 50838618 -199849236 - L1PA14 LINE L1 -3 6158 5954 4542 93 18 0 chr2 50838635 50839344 -199848510 - L1PA14 LINE L1 -284 5877 5154 341 336 9 9 chr2 50839985 50840101 -199847753 - MIR3 SINE MIR -8 200 85 358 306 44 33 chr2 50840172 50840355 -199847499 + MER5A DNA MER1_type 5 189 0 2247 109 0 0 chr2 50840670 50840963 -199846891 + AluSx SINE Alu 1 293 -19 226 302 171 8 chr2 50841350 50841479 -199846375 + MIR SINE MIR 49 198 -64 536 214 1 13 chr2 50841599 50841706 -199846148 + MER5A DNA MER1_type 9 103 -75 318 277 69 20 chr2 50842447 50842548 -199845306 + LTR40b LTR ERVL 80 185 -277 662 272 98 21 chr2 50842699 50842910 -199844944 + LTR40b LTR ERVL 152 392 -70 399 41 0 0 chr2 50842910 50842959 -199844895 + (TG)n Simple_repeat Simple_repeat 1 49 0 662 272 98 21 chr2 50842959 50843034 -199844820 + LTR40b LTR ERVL 392 460 -2 22 0 0 0 chr2 50843052 50843074 -199844780 + AT_rich Low_complexity Low_complexity 1 22 0 553 287 111 6 chr2 50844367 50844548 -199843306 + MIR3 SINE MIR 6 205 -3 193 317 17 0 chr2 50844774 50844834 -199843020 - MIR SINE MIR -115 93 33 2404 91 0 0 chr2 50844948 50845255 -199842599 - AluY SINE Alu -4 307 1 21 57 0 0 chr2 50845711 50845746 -199842108 + AT_rich Low_complexity Low_complexity 1 35 0 380 322 38 49 chr2 50846261 50846444 -199841410 - MIR3 SINE MIR 0 208 28 688 266 120 42 chr2 50846579 50847004 -199840850 - MLT1J LTR MaLR -22 489 32 739 64 18 9 chr2 50847006 50847116 -199840738 + (GAAA)n Simple_repeat Simple_repeat 1 111 0 214 268 28 56 chr2 50847245 50847316 -199840538 + MIR3 SINE MIR 114 182 -26 900 234 36 60 chr2 50847422 50847755 -199840099 + LTR16A LTR ERVL 1 325 -125 315 257 54 11 chr2 50848405 50848513 -199839341 - MIR SINE MIR -67 141 52 231 293 122 24 chr2 50849216 50849339 -199838515 - L3 LINE CR1 -108 1469 1335 248 314 96 75 chr2 50849389 50849723 -199838131 + L2 LINE L2 2932 3272 0 1069 297 63 25 chr2 50849802 50850246 -199837608 + LTR16B LTR ERVL 1 461 -3 351 272 83 41 chr2 50850271 50850289 -199837565 - L3 LINE CR1 -470 1107 1091 831 233 0 13 chr2 50850289 50850448 -199837406 + FRAM SINE Alu 2 158 -8 351 272 83 41 chr2 50850448 50850598 -199837256 - L3 LINE CR1 -486 1091 932 247 297 63 45 chr2 50850947 50851058 -199836796 + L2 LINE L2 3200 3312 -1 462 310 129 16 chr2 50851186 50851496 -199836358 + L2 LINE L2 2632 2976 -338 1842 167 0 16 chr2 50854737 50855043 -199832811 + AluJb SINE Alu 1 301 -11 34 0 0 0 chr2 50855913 50855947 -199831907 + AT_rich Low_complexity Low_complexity 1 34 0 1707 137 6 82 chr2 50856343 50856658 -199831196 - AluJb SINE Alu -21 291 1 6400 99 11 0 chr2 50856904 50857796 -199830058 - L1PA14 LINE L1 -9 6152 5249 245 324 103 15 chr2 50858195 50858331 -199829523 - MIR SINE MIR -70 192 45 26 0 0 0 chr2 50858422 50858448 -199829406 + AT_rich Low_complexity Low_complexity 1 26 0 226 301 74 61 chr2 50859214 50859377 -199828477 - MER5A DNA MER1_type -4 185 21 301 240 58 99 chr2 50860942 50861026 -199826828 - MIR SINE MIR -94 168 93 2579 133 64 10 chr2 50861026 50861432 -199826422 + MSTA LTR MaLR 1 428 0 301 240 58 99 chr2 50861432 50861518 -199826336 - MIR SINE MIR -169 93 5 324 0 0 0 chr2 50862550 50862586 -199825268 + (TG)n Simple_repeat Simple_repeat 2 37 0 490 224 26 83 chr2 50863138 50863294 -199824560 - MER103 DNA DNA -19 147 1 2293 117 129 21 chr2 50864994 50865380 -199822474 - MSTB1 LTR MaLR 0 432 5 414 176 27 0 chr2 50865563 50865637 -199822217 + MER5B DNA MER1_type 102 177 -1 329 296 80 25 chr2 50866281 50866443 -199821411 - MIR SINE MIR -45 217 47 677 313 105 26 chr2 50866664 50867131 -199820723 - LTR33 LTR ERVL -2 519 16 468 283 65 0 chr2 50867346 50867529 -199820325 - MLT1H LTR MaLR -5 544 342 603 233 25 64 chr2 50867600 50867802 -199820052 - MLT1H LTR MaLR -355 194 1 282 266 46 73 chr2 50868577 50868686 -199819168 + MER91C DNA MER1_type 32 137 -3 275 327 89 18 chr2 50868799 50868962 -199818892 + MIR SINE MIR 16 192 -58 640 306 43 10 chr2 50870752 50870993 -199816861 - MIR SINE MIR -13 249 3 403 174 33 43 chr2 50871319 50871411 -199816443 + MER94 DNA DNA 11 101 -33 235 254 28 0 chr2 50871866 50871937 -199815917 + GA-rich Low_complexity Low_complexity 3 75 0 1728 164 30 27 chr2 50872983 50873281 -199814573 - AluJb SINE Alu -13 299 1 319 307 63 8 chr2 50873839 50873966 -199813888 - L2 LINE L2 -1 3271 3138 959 259 77 51 chr2 50873972 50874543 -199813311 + MLT2E LTR ERVL 1 618 -10 702 133 44 18 chr2 50874723 50874836 -199813018 + THE1B LTR MaLR 1 116 -248 218 365 66 29 chr2 50874952 50875196 -199812658 - L2 LINE L2 -454 2860 2608 266 309 149 5 chr2 50875293 50875481 -199812373 - L2 LINE L2 -1228 2086 1872 256 341 59 0 chr2 50876443 50876528 -199811326 + L2 LINE L2 3146 3235 -37 563 290 15 67 chr2 50879124 50879393 -199808461 + MIR SINE MIR 7 261 -1 346 280 24 24 chr2 50881007 50881132 -199806722 + MIR SINE MIR 29 153 -109 1878 164 0 25 chr2 50881216 50881533 -199806321 - AluJb SINE Alu -3 309 1 639 246 0 0 chr2 50881553 50881679 -199806175 + FLAM_A SINE Alu 1 126 -7 532 261 14 95 chr2 50881901 50882056 -199805798 + MIR SINE MIR 27 156 -106 1975 192 102 17 chr2 50882056 50882525 -199805329 + LTR22 LTR ERVK 1 509 0 532 261 14 95 chr2 50882525 50882603 -199805251 + MIR SINE MIR 156 239 -23 530 285 80 39 chr2 50882999 50883294 -199804560 - L1ME3A LINE L1 -208 5962 5681 1147 175 51 35 chr2 50883294 50883609 -199804245 + MER33 DNA MER1_type 5 324 0 530 285 80 39 chr2 50883609 50884083 -199803771 - L1ME3A LINE L1 -489 5681 5158 27977 93 14 3 chr2 50884092 50889133 -199798721 - L1PA7 LINE L1 -3 6151 1077 19846 97 19 41 chr2 50939147 50942629 -199745225 - L1P LINE L1 -745 5401 1997 4888 55 54 1 chr2 50942754 50943479 -199744375 + L1PA6 LINE L1 5391 6153 -1 210 37 0 0 chr2 50943745 50943772 -199744082 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 230 330 60 44 chr2 50945140 50945322 -199742532 + L2 LINE L2 3113 3297 -16 242 329 0 12 chr2 50947761 50947843 -199740011 + MIR SINE MIR 21 101 -107 1942 210 119 4 chr2 50948320 50948773 -199739081 + MLT1D LTR MaLR 1 505 0 296 136 0 0 chr2 50949246 50949290 -199738564 + MSTA LTR MaLR 385 428 0 1159 181 66 80 chr2 50949339 50949627 -199738227 - AluJo SINE Alu -16 286 3 281 319 57 25 chr2 50949685 50949842 -199738012 + MIR3 SINE MIR 47 208 0 484 264 98 25 chr2 50951251 50951414 -199736440 - MIR SINE MIR -87 175 1 211 351 52 0 chr2 50951414 50951548 -199736306 - MIR SINE MIR -76 186 46 1537 184 73 6 chr2 50951630 50951946 -199735908 + MLT1A1 LTR MaLR 29 365 0 306 0 0 0 chr2 50952859 50952893 -199734961 + (TG)n Simple_repeat Simple_repeat 1 34 0 857 185 34 29 chr2 50953101 50953306 -199734548 - MER20 DNA MER1_type -7 212 7 1742 189 0 7 chr2 50953469 50953765 -199734089 + AluJb SINE Alu 6 299 -13 658 189 211 2 chr2 50953780 50954015 -199733839 - MER33 DNA MER1_type -46 317 1 312 333 121 19 chr2 50954083 50954290 -199733564 + MIR SINE MIR 23 250 -12 6909 90 6 9 chr2 50954488 50960567 -199727287 + L1PA6 LINE L1 11 6154 0 7558 27 5 0 chr2 50960899 50962238 -199725616 + L1PA3 LINE L1 4802 6144 -11 217 356 161 0 chr2 50963031 50963149 -199724705 - L2 LINE L2 -15 3257 3121 382 262 51 93 chr2 50963862 50964040 -199723814 - MIR SINE MIR -63 145 27 766 274 18 14 chr2 50964407 50964684 -199723170 + L1M4 LINE L1 4769 5046 -1100 916 261 64 25 chr2 50964688 50965048 -199722806 + MLT1D LTR MaLR 126 499 -6 224 312 21 43 chr2 50965856 50965949 -199721905 - L2 LINE L2 -1 3271 3181 759 199 143 25 chr2 50966196 50966392 -199721462 - MER20 DNA MER1_type 0 219 1 3024 161 34 14 chr2 50966702 50967291 -199720563 - L1PB4 LINE L1 -3 6153 5553 231 301 118 29 chr2 50967450 50967586 -199720268 + MIR SINE MIR 60 207 -55 * 2530 272 141 19 chr2 50967584 50968021 -199719833 - L2 LINE L2 -392 2922 2540 216 0 0 0 chr2 50968021 50968045 -199719809 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2530 272 141 19 chr2 50968045 50968607 -199719247 - L2 LINE L2 -774 2540 1801 268 298 136 5 chr2 50968626 50968817 -199719037 + L1MC4a LINE L1 4746 4961 -1185 544 244 29 114 chr2 50969091 50969407 -199718447 + L1MC4a LINE L1 5314 5602 -2206 1829 180 99 7 chr2 50969412 50969835 -199718019 - MLT1C LTR MaLR 0 467 6 365 345 104 0 chr2 50969839 50970059 -199717795 + L1MC4a LINE L1 5602 5844 -1964 613 163 207 0 chr2 50972034 50972169 -199715685 + MER31A LTR ERV1 1 163 -322 542 184 86 0 chr2 50972165 50972317 -199715537 - MER63C DNA MER1_type -38 892 728 * 2058 216 57 0 chr2 50972316 50972825 -199715029 - MER63C DNA MER1_type -320 610 73 243 61 0 0 chr2 50972829 50972862 -199714992 + (TG)n Simple_repeat Simple_repeat 2 34 0 264 323 44 25 chr2 50973255 50973413 -199714441 - MIR SINE MIR -30 232 72 220 270 34 0 chr2 50974854 50974943 -199712911 + T-rich Low_complexity Low_complexity 5 96 0 312 331 120 0 chr2 50975060 50975202 -199712652 - L1MEc LINE L1 -3527 2688 2530 317 223 181 47 chr2 50975232 50975425 -199712429 - L1MEc LINE L1 -3983 2413 2195 7534 29 0 5 chr2 50975432 50976778 -199711076 - L1PA4 LINE L1 0 6155 4811 249 240 0 0 chr2 50977923 50977973 -199709881 - L2 LINE L2 -3 3310 3261 706 249 27 9 chr2 50978097 50978322 -199709532 - MER106A DNA MER1_type 0 236 8 361 293 88 103 chr2 50978384 50978647 -199709207 - L2 LINE L2 -8 3264 3006 216 97 0 0 chr2 50978898 50978929 -199708925 + (TG)n Simple_repeat Simple_repeat 2 32 0 197 318 183 16 chr2 50979444 50979570 -199708284 - L2 LINE L2 -5 3267 3121 306 264 48 64 chr2 50979637 50979762 -199708092 + MER103 DNA DNA 1 123 -43 3357 161 55 31 chr2 50980090 50980800 -199707054 - LTR8A LTR ERV1 0 727 1 768 250 49 0 chr2 50980811 50980975 -199706879 + MER5A DNA MER1_type 3 174 -15 233 265 73 0 chr2 50981006 50981074 -199706780 + MIR SINE MIR 101 173 -89 302 361 0 10 chr2 50981330 50981427 -199706427 + L2 LINE L2 3125 3220 -52 223 276 46 35 chr2 50981836 50981923 -199705931 - MIR SINE MIR -92 170 83 2016 99 108 10 chr2 50982358 50982720 -199705134 - LTR7 LTR ERV1 0 450 1 1308 137 62 4 chr2 50982970 50983394 -199704460 + LTR54 LTR ERV1 1 509 -1 549 309 98 4 chr2 50983400 50983656 -199704198 + L2 LINE L2 1908 2187 -1127 236 360 67 25 chr2 50983650 50983889 -199703965 - L2 LINE L2 -2439 875 627 * 180 324 135 14 chr2 50985002 50985150 -199702704 - L2 LINE L2 -182 3090 2925 243 152 0 0 chr2 50985496 50985542 -199702312 - MLT2B2 LTR ERVL -5 510 465 525 46 11 35 chr2 50985544 50985555 -199702299 + (TATAA)n Simple_repeat Simple_repeat 1 95 0 525 46 11 35 chr2 50985555 50985642 -199702212 + (TATAA)n Simple_repeat Simple_repeat 5 89 0 2383 163 8 63 chr2 50985684 50986160 -199701694 - MLT2B2 LTR ERVL -33 451 21 250 241 24 24 chr2 50986301 50986384 -199701470 - L2 LINE L2 -4 3309 3227 434 18 18 0 chr2 50987620 50987675 -199700179 + (CA)n Simple_repeat Simple_repeat 2 57 0 345 159 0 0 chr2 50988255 50988318 -199699536 + GA-rich Low_complexity Low_complexity 3 65 0 383 192 51 0 chr2 50988661 50988739 -199699115 - L1P5 LINE L1 -574 5582 5501 266 263 53 21 chr2 50989498 50989593 -199698261 + MIR SINE MIR 22 119 -143 37602 41 2 0 chr2 50989594 50995020 -199692834 + L1PA4 LINE L1 746 6181 0 41 21 0 0 chr2 50995115 50995163 -199692691 + AT_rich Low_complexity Low_complexity 1 48 0 438 234 43 43 chr2 50997421 50997562 -199690292 + L1M4b LINE L1 24 164 -6695 1740 271 57 0 chr2 50997579 50997981 -199689873 + L1M4b LINE L1 262 686 -6173 1119 293 40 9 chr2 50997998 50998442 -199689412 + L1M4b LINE L1 1951 2408 -4551 213 226 0 0 chr2 50998445 50998498 -199689356 + (TA)n Simple_repeat Simple_repeat 1 53 0 25 51 0 0 chr2 50998509 50998548 -199689306 + AT_rich Low_complexity Low_complexity 1 39 0 273 267 31 101 chr2 50998632 50998890 -199688964 + L1M4b LINE L1 2473 2712 -4426 255 277 145 0 chr2 50998972 50999055 -199688799 - MER46C DNA MER2_type -238 100 6 316 308 17 17 chr2 50999291 50999411 -199688443 + L1M4b LINE L1 3269 3388 -3569 5611 140 72 21 chr2 50999492 51000133 -199687721 + Tigger3b DNA MER2_type 2 609 -2419 1930 153 137 8 chr2 51000133 51000512 -199687342 + MSTA LTR MaLR 1 428 0 5611 140 72 21 chr2 51000512 51000646 -199687208 + Tigger3b DNA MER2_type 609 735 -2293 2135 186 19 21 chr2 51000646 51001071 -199686783 - MSTB LTR MaLR 0 426 3 5611 140 72 21 chr2 51001071 51001415 -199686439 + Tigger3b DNA MER2_type 735 1217 -14 4439 159 62 7 chr2 51001415 51002250 -199685604 + L1PA16 LINE L1 5258 6138 -28 180 228 0 0 chr2 51002581 51002638 -199685216 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 3071 247 12 31 chr2 51002746 51003498 -199684356 + L1MB4 LINE L1 26 763 -5621 * 4547 209 42 13 chr2 51003469 51005527 -199682327 + L1MB4 LINE L1 4282 6406 -10 507 264 162 47 chr2 51005534 51006060 -199681794 + L1M4b LINE L1 3553 4131 -2826 486 283 80 49 chr2 51006310 51006746 -199681108 + L1M4b LINE L1 4484 4935 -2022 228 86 0 0 chr2 51006747 51006782 -199681072 + (TC)n Simple_repeat Simple_repeat 2 36 0 786 331 52 9 chr2 51006885 51007229 -199680625 + LTR16A LTR ERVL 83 441 -9 308 354 39 0 chr2 51007329 51007459 -199680395 + L1ME LINE L1 12 146 -5924 275 316 102 28 chr2 51007679 51008002 -199679852 + L1M4b LINE L1 5606 5952 -1005 327 293 73 0 chr2 51008115 51008238 -199679616 + L1M LINE L1 6066 6197 -2422 1716 163 60 41 chr2 51008281 51008649 -199679205 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr2 51008673 51008703 -199679151 + AT_rich Low_complexity Low_complexity 1 30 0 194 217 0 17 chr2 51009157 51009217 -199678637 + GA-rich Low_complexity Low_complexity 3 61 0 451 251 94 10 chr2 51009350 51009555 -199678299 - MLT1L LTR MaLR -224 391 174 863 228 16 21 chr2 51009619 51009808 -199678046 + MER20 DNA MER1_type 3 190 -29 185 400 10 10 chr2 51010083 51010183 -199677671 + MIR SINE MIR 15 114 -148 407 246 99 13 chr2 51010183 51010415 -199677439 + L1M4 LINE L1 4286 4537 -1609 325 274 40 24 chr2 51010512 51010636 -199677218 + MIR SINE MIR 129 254 -8 992 187 40 132 chr2 51012009 51012411 -199675443 + MLT1A1 LTR MaLR 1 365 0 2151 86 0 43 chr2 51012455 51012758 -199675096 + AluSx SINE Alu 1 290 -22 413 311 9 16 chr2 51013050 51013228 -199674626 + MIR SINE MIR 13 191 -64 623 260 78 12 chr2 51013944 51014186 -199673668 + MER112 DNA MER1_type 2 259 -1 1825 63 0 4 chr2 51014253 51014490 -199673364 - L1PA7 LINE L1 -13 6141 5906 453 292 114 3 chr2 51014848 51015136 -199672718 + MLT1H1 LTR MaLR 1 288 -300 220 136 23 0 chr2 51015276 51015320 -199672534 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 287 321 55 18 chr2 51015633 51015742 -199672112 - L2 LINE L2 -22 3291 3179 2111 138 0 0 chr2 51016088 51016399 -199671455 - AluSx SINE Alu -1 311 1 202 186 68 17 chr2 51019522 51019581 -199668273 + (TCTCTG)n Simple_repeat Simple_repeat 1 62 0 203 328 92 34 chr2 51019630 51019749 -199668105 + L3 LINE CR1 1447 1572 -5 21 57 0 0 chr2 51020053 51020088 -199667766 + AT_rich Low_complexity Low_complexity 1 35 0 332 269 11 11 chr2 51020115 51020208 -199667646 - MIR SINE MIR 0 262 170 673 247 0 14 chr2 51020617 51020763 -199667091 - MIR SINE MIR -112 150 7 250 342 45 100 chr2 51021092 51021361 -199666493 + L2 LINE L2 2992 3245 -27 855 255 128 49 chr2 51021366 51021857 -199665997 + L2 LINE L2 1560 2170 -1144 588 361 40 29 chr2 51021858 51022204 -199665650 + L2 LINE L2 2347 2696 -618 1075 277 29 91 chr2 51022240 51022868 -199664986 - L1ME3A LINE L1 -16 6154 5566 465 216 23 145 chr2 51022881 51023191 -199664663 - L1MC4 LINE L1 -36 8006 7735 239 296 192 24 chr2 51023191 51023316 -199664538 - MER5A DNA MER1_type -3 186 41 257 252 90 9 chr2 51023346 51023457 -199664397 - L1MC4 LINE L1 -294 7748 7629 * 406 280 108 61 chr2 51023456 51024059 -199663795 - L1MEd LINE L1 -4755 1641 1011 243 60 60 0 chr2 51024178 51024228 -199663626 + (TA)n Simple_repeat Simple_repeat 1 53 0 195 114 0 0 chr2 51024730 51024765 -199663089 + (A)n Simple_repeat Simple_repeat 1 35 0 2020 119 7 32 chr2 51025024 51025334 -199662520 + AluSq SINE Alu 1 302 -11 242 277 10 50 chr2 51025886 51025987 -199661867 + MIR SINE MIR 58 154 -108 321 26 0 0 chr2 51026186 51026224 -199661630 + (TG)n Simple_repeat Simple_repeat 2 39 0 1368 278 141 68 chr2 51027233 51028146 -199659708 - L2 LINE L2 0 3313 2284 764 160 95 0 chr2 51028146 51028315 -199659539 + MER53 DNA DNA 3 187 -2 1368 278 141 68 chr2 51028315 51028472 -199659382 - L2 LINE L2 -1029 2284 2140 402 284 99 54 chr2 51029259 51029481 -199658373 + MIR SINE MIR 31 262 0 23 0 0 0 chr2 51029849 51029872 -199657982 + AT_rich Low_complexity Low_complexity 1 23 0 674 192 24 0 chr2 51030466 51030591 -199657263 + FRAM SINE Alu 10 137 -39 227 227 15 0 chr2 51030598 51030664 -199657190 + GA-rich Low_complexity Low_complexity 1 67 0 341 237 0 0 chr2 51030736 51030812 -199657042 + MER116 DNA Mariner 2 77 -3 213 282 170 29 chr2 51031760 51031894 -199655960 - MIR SINE MIR -66 142 32 219 196 39 0 chr2 51033044 51033095 -199654759 - L2 LINE L2 0 3313 3261 247 319 32 19 chr2 51033251 51033408 -199654446 + L1ME LINE L1 5745 5903 -218 26724 92 10 8 chr2 51033890 51038813 -199649041 - L1PA7 LINE L1 0 6154 1226 2388 119 31 0 chr2 51039571 51039924 -199647930 + THE1B LTR MaLR 1 364 0 2201 93 3 3 chr2 51040726 51041015 -199646839 + AluY SINE Alu 1 289 -22 929 274 25 4 chr2 51041432 51041673 -199646181 + MIR SINE MIR 16 261 -1 197 308 19 39 chr2 51042167 51042271 -199645583 - MIR SINE MIR -105 157 56 455 321 65 4 chr2 51042956 51043202 -199644652 - MIR SINE MIR 0 262 2 189 74 0 0 chr2 51044237 51044264 -199643590 + (TG)n Simple_repeat Simple_repeat 2 28 0 383 212 77 4 chr2 51044395 51044509 -199643345 + MIR SINE MIR 23 151 -62 233 337 0 12 chr2 51044743 51044826 -199643028 - L2 LINE L2 -1 3271 3190 253 289 52 30 chr2 51045625 51045760 -199642094 - MLT1J2 LTR MaLR -236 214 77 2205 95 0 7 chr2 51046415 51046698 -199641156 + AluY SINE Alu 1 281 -30 186 370 65 0 chr2 51046906 51046998 -199640856 + MIR SINE MIR 34 131 -77 568 305 131 15 chr2 51047351 51047679 -199640175 - L1ME4a LINE L1 -226 5895 5530 407 315 95 17 chr2 51047692 51047924 -199639930 + MIR SINE MIR 13 262 0 24 53 0 0 chr2 51048183 51048221 -199639633 + AT_rich Low_complexity Low_complexity 1 38 0 732 113 9 0 chr2 51048315 51048421 -199639433 + U6 snRNA snRNA 1 107 0 12251 127 24 20 chr2 51048421 51050540 -199637314 + L1P LINE L1 12 2139 -4007 8867 191 17 4 chr2 51050652 51052723 -199635131 - L1P4 LINE L1 -648 5515 3425 362 293 9 26 chr2 51052729 51052845 -199635009 + CT-rich Low_complexity Low_complexity 3 116 0 256 191 0 48 chr2 51054264 51054327 -199633527 + CT-rich Low_complexity Low_complexity 4 63 0 544 242 119 44 chr2 51054366 51054659 -199633195 + MER113 DNA MER1_type? 176 490 -31 502 288 204 32 chr2 51054733 51055187 -199632667 - L2 LINE L2 -5 3308 2751 183 80 0 0 chr2 51056127 51056152 -199631702 + (TG)n Simple_repeat Simple_repeat 1 25 0 218 342 26 26 chr2 51056161 51056275 -199631579 + L2 LINE L2 3196 3309 -4 221 307 13 40 chr2 51056828 51056903 -199630951 + MER5A DNA MER1_type 34 106 -83 191 351 95 0 chr2 51057216 51057290 -199630564 + MIR SINE MIR 11 91 -171 297 151 0 0 chr2 51057317 51057370 -199630484 + (TG)n Simple_repeat Simple_repeat 2 54 0 355 289 8 25 chr2 51057377 51057498 -199630356 + MIR SINE MIR 124 242 -20 181 338 59 0 chr2 51057800 51057868 -199629986 - MIR SINE MIR -81 127 56 282 364 91 0 chr2 51058878 51059021 -199628833 - MIR SINE MIR -3 259 104 1003 156 25 0 chr2 51059159 51059358 -199628496 + L1MC3 LINE L1 7582 7785 0 572 320 166 24 chr2 51059421 51060090 -199627764 - L2 LINE L2 -656 2658 1895 606 28 0 0 chr2 51060210 51060282 -199627572 + (TA)n Simple_repeat Simple_repeat 1 72 0 2219 82 7 7 chr2 51060336 51060628 -199627226 - AluSq SINE Alu -21 292 1 246 317 139 44 chr2 51062548 51062728 -199625126 - MIR3 SINE MIR -9 199 3 25 31 0 0 chr2 51063882 51063914 -199623940 + AT_rich Low_complexity Low_complexity 1 32 0 192 306 45 9 chr2 51064075 51064186 -199623668 - MIR SINE MIR -13 249 135 406 248 51 0 chr2 51064188 51064305 -199623549 + MER5C DNA MER1_type 2 124 -200 431 232 106 26 chr2 51064443 51064594 -199623260 + MER63A DNA MER1_type 44 206 -4 811 275 163 48 chr2 51064998 51066032 -199621822 - HAL1 LINE L1 -1155 1352 201 5208 127 42 8 chr2 51066420 51067800 -199620054 + L1PA16 LINE L1 4751 6166 0 2428 227 28 69 chr2 51068545 51069372 -199618482 + L1ME1 LINE L1 5298 6090 -76 772 222 61 15 chr2 51069372 51069570 -199618284 + MLT1F1 LTR MaLR 351 557 -10 264 165 23 83 chr2 51069575 51069696 -199618158 + (TTATA)n Simple_repeat Simple_repeat 5 119 -10 1900 147 13 17 chr2 51069696 51069996 -199617858 - AluSx SINE Alu -13 299 1 264 165 23 83 chr2 51069996 51070007 -199617847 + (TTATA)n Simple_repeat Simple_repeat 119 129 0 291 54 0 0 chr2 51070094 51070131 -199617723 + (TA)n Simple_repeat Simple_repeat 1 37 0 362 307 68 44 chr2 51070456 51070661 -199617193 - L2 LINE L2 -3 3310 3101 960 246 53 9 chr2 51071735 51071963 -199615891 - MIR SINE MIR -14 248 11 235 346 79 106 chr2 51072924 51073378 -199614476 - L2 LINE L2 -22 3250 2809 715 271 170 60 chr2 51073473 51073919 -199613935 + L2 LINE L2 2814 3308 -5 309 343 186 5 chr2 51073931 51074141 -199613713 - L2 LINE L2 -609 2705 2458 230 259 0 0 chr2 51074215 51074273 -199613581 + MLT1I LTR MaLR 80 137 -272 2004 137 37 0 chr2 51074589 51074888 -199612966 + AluSg SINE Alu 1 310 0 431 328 109 19 chr2 51074928 51075239 -199612615 - L2 LINE L2 -856 2458 2120 907 326 145 38 chr2 51076317 51077331 -199610523 - L2 LINE L2 -491 2823 1701 490 302 157 38 chr2 51077428 51077881 -199609973 - L2 LINE L2 -2463 851 345 2323 75 0 25 chr2 51077883 51078201 -199609653 + AluY SINE Alu 2 311 0 21 0 0 0 chr2 51078383 51078404 -199609450 + AT_rich Low_complexity Low_complexity 1 21 0 718 241 92 29 chr2 51080221 51080537 -199607317 - MER69B DNA AcHobo -203 1023 688 284 315 101 67 chr2 51080552 51081213 -199606641 + L1MEc LINE L1 61 744 -5652 391 42 0 0 chr2 51081224 51081272 -199606582 - THE1A LTR MaLR -307 48 1 11600 104 2 0 chr2 51081278 51082848 -199605006 - THE1A-int LTR MaLR -6 1574 2 2700 96 0 0 chr2 51082849 51083204 -199604650 - THE1A LTR MaLR 0 355 1 3056 263 145 31 chr2 51083282 51085666 -199602188 + L1MEc LINE L1 2065 4681 -1534 403 247 108 38 chr2 51085816 51085974 -199601880 - Charlie8 DNA MER1_type -2152 265 97 569 303 69 30 chr2 51087829 51088060 -199599794 + MIR SINE MIR 20 259 -3 21 0 0 0 chr2 51090035 51090056 -199597798 + AT_rich Low_complexity Low_complexity 1 21 0 223 314 57 46 chr2 51091124 51091299 -199596555 - MIR SINE MIR 0 262 86 1842 104 114 11 chr2 51091833 51092113 -199595741 - AluSg1 SINE Alu 0 309 1 1940 117 9 122 chr2 51092221 51092647 -199595207 - L1PA16 LINE L1 -1 6165 5788 475 174 0 0 chr2 51092934 51093020 -199594834 - MER103 DNA DNA -52 114 29 771 294 68 45 chr2 51093139 51093476 -199594378 + LTR16A LTR ERVL 95 439 -11 1175 303 29 60 chr2 51093487 51094042 -199593812 + HERV16 LTR ERVL 2 539 -4457 356 331 0 0 chr2 51094065 51094198 -199593656 + ERVL LTR ERVL 2774 2906 -2858 5492 31 0 0 chr2 51094205 51094849 -199593005 - L1PA3 LINE L1 -3 6152 5509 4286 22 0 0 chr2 51094850 51095473 -199592381 + L1PA3 LINE L1 4890 5512 -643 2440 333 60 46 chr2 51095523 51097205 -199590649 + ERVL LTR ERVL 2947 4652 -1112 304 349 19 14 chr2 51097228 51097437 -199590417 + ERVL LTR ERVL 4787 4996 0 526 339 39 15 chr2 51097507 51097767 -199590087 + LTR16A LTR ERVL 107 372 -78 26 30 0 0 chr2 51098274 51098307 -199589547 + AT_rich Low_complexity Low_complexity 1 33 0 866 252 82 58 chr2 51098473 51098838 -199589016 + MLT1A2 LTR MaLR 1 374 0 31 26 0 0 chr2 51099586 51099624 -199588230 + AT_rich Low_complexity Low_complexity 1 38 0 315 0 0 0 chr2 51099819 51099854 -199588000 + (TG)n Simple_repeat Simple_repeat 2 36 0 245 278 88 60 chr2 51099929 51100078 -199587776 - HAL1 LINE L1 -1189 1318 1175 3828 41 2 0 chr2 51100078 51100540 -199587314 - L1PA5 LINE L1 -7 6147 5685 245 278 88 60 chr2 51100540 51100869 -199586985 - HAL1 LINE L1 -1332 1175 827 282 95 0 0 chr2 51101255 51101297 -199586557 + (TG)n Simple_repeat Simple_repeat 2 43 0 22 0 0 0 chr2 51102373 51102395 -199585459 + AT_rich Low_complexity Low_complexity 1 22 0 604 293 30 56 chr2 51104603 51104835 -199583019 + L2 LINE L2 2669 2894 -420 5070 166 14 53 chr2 51104855 51105049 -199582805 - L1MA6 LINE L1 -12 6288 6088 2887 3 0 0 chr2 51105049 51105359 -199582495 - AluYa5 SINE Alu -1 310 1 5070 166 14 53 chr2 51105359 51106492 -199581362 - L1MA6 LINE L1 -212 6088 5020 2256 101 0 3 chr2 51106492 51106788 -199581066 - AluSg SINE Alu -14 296 2 5070 166 14 53 chr2 51106788 51106954 -199580900 - L1MA6 LINE L1 -1280 5020 4849 16023 189 13 11 chr2 51106957 51111240 -199576614 + L1PA13 LINE L1 1883 6163 0 7436 176 36 10 chr2 51111235 51112793 -199575061 - L1MA6 LINE L1 -1286 4860 3262 * 344 337 102 44 chr2 51112795 51113157 -199574697 + L2 LINE L2 2890 3272 -41 204 238 0 0 chr2 51113168 51113210 -199574644 + MER5C DNA MER1_type 34 75 -249 2326 77 3 10 chr2 51113886 51114199 -199573655 + AluY SINE Alu 1 311 0 304 316 244 10 chr2 51114240 51114449 -199573405 - MIR SINE MIR -1 261 4 498 118 0 0 chr2 51114487 51114580 -199573274 + (TAGA)n Simple_repeat Simple_repeat 2 94 0 295 311 101 17 chr2 51114780 51114899 -199572955 + MER5A DNA MER1_type 61 189 0 1668 170 143 14 chr2 51115452 51115810 -199572044 - MSTA LTR MaLR 0 428 19 1801 161 24 34 chr2 51115810 51116189 -199571665 - THE1C LTR MaLR 0 375 1 1668 170 143 14 chr2 51116189 51116201 -199571653 - MSTA LTR MaLR -409 19 10 2179 128 3 0 chr2 51116291 51116596 -199571258 - AluSg SINE Alu -4 306 1 23 33 0 0 chr2 51117490 51117520 -199570334 + AT_rich Low_complexity Low_complexity 1 30 0 1912 176 15 47 chr2 51120140 51120543 -199567311 - MLT1B LTR MaLR 0 390 1 455 262 65 90 chr2 51120834 51121124 -199566730 - MER102a DNA MER1_type 0 330 48 1927 155 7 3 chr2 51121305 51121608 -199566246 - AluJb SINE Alu 0 312 9 506 210 151 0 chr2 51122163 51122282 -199565572 - MER58A DNA MER1_type 0 163 27 271 268 0 28 chr2 51123544 51123615 -199564239 + L2 LINE L2 3186 3254 -18 2125 99 0 3 chr2 51124897 51125191 -199562663 - AluY SINE Alu -18 293 1 4438 172 46 14 chr2 51125264 51126574 -199561280 - L1MA6 LINE L1 -133 6167 4824 267 31 0 0 chr2 51127041 51127073 -199560781 + (TG)n Simple_repeat Simple_repeat 1 32 0 736 242 31 0 chr2 51127295 51127489 -199560365 - HAL1 LINE L1 -1048 1459 1260 879 273 92 32 chr2 51127855 51128255 -199559599 + LTR16A1 LTR ERVL 34 457 0 312 247 12 0 chr2 51128257 51128342 -199559512 - HAL1 LINE L1 -1423 1084 999 311 49 24 0 chr2 51128502 51128543 -199559311 - MLT2B3 LTR ERVL -2 552 511 2260 166 13 53 chr2 51128543 51128994 -199558860 + MER65A LTR ERV1 1 433 -12 3157 170 15 17 chr2 51129011 51129546 -199558308 - MLT2B3 LTR ERVL -20 534 1 816 247 102 8 chr2 51130044 51130279 -199557575 - MIR SINE MIR -5 257 1 2327 211 77 62 chr2 51130660 51130997 -199556857 - L1ME1 LINE L1 -45 6121 5790 1132 169 0 0 chr2 51130997 51131192 -199556662 - L1PB4 LINE L1 -1 6155 5961 2327 211 77 62 chr2 51131192 51131637 -199556217 - L1ME1 LINE L1 -376 5790 5335 1346 36 6 0 chr2 51131637 51131805 -199556049 - L1PA4 LINE L1 0 6155 5987 2327 211 77 62 chr2 51131805 51132016 -199555838 - L1ME1 LINE L1 -831 5335 5129 194 292 14 14 chr2 51133423 51133495 -199554359 - MIR3 SINE MIR -11 197 126 408 341 73 0 chr2 51133931 51134095 -199553759 - MIR SINE MIR -70 192 17 205 155 35 0 chr2 51134151 51134209 -199553645 + (TA)n Simple_repeat Simple_repeat 1 60 0 1711 143 0 23 chr2 51134209 51134475 -199553379 - AluSx SINE Alu -16 296 37 598 244 0 0 chr2 51135247 51135362 -199552492 + MER20 DNA MER1_type 1 115 -104 * 683 163 30 114 chr2 51135361 51135527 -199552327 + MER20 DNA MER1_type 68 219 0 407 252 48 141 chr2 51135691 51135981 -199551873 - LTR67 LTR ERVL -292 265 3 272 346 177 26 chr2 51136189 51136761 -199551093 + L2 LINE L2 1905 2562 -752 747 277 34 8 chr2 51137081 51137316 -199550538 + MER110 LTR ERV1 247 487 -4 390 273 35 41 chr2 51138255 51138427 -199549427 - L3b LINE CR1 -124 1459 1289 191 59 0 29 chr2 51138540 51138574 -199549280 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 737 281 36 36 chr2 51139236 51139485 -199548369 + MIR SINE MIR 13 261 -1 2332 66 3 10 chr2 51140502 51140803 -199547051 - AluY SINE Alu -12 299 1 209 189 0 0 chr2 51140861 51140898 -199546956 + (CA)n Simple_repeat Simple_repeat 2 38 0 4738 165 46 7 chr2 51141555 51142424 -199545430 + MER4D LTR ERV1 1 903 0 1708 185 22 84 chr2 51143224 51143406 -199544448 + MLT1B LTR MaLR 1 193 -197 1041 226 75 72 chr2 51143406 51143795 -199544059 - MLT1B LTR MaLR 0 390 1 1708 185 22 84 chr2 51143795 51144028 -199543826 + MLT1B LTR MaLR 193 390 0 1135 229 57 64 chr2 51144354 51144796 -199543058 + MER39 LTR ERV1 73 707 0 22 0 0 0 chr2 51145942 51145964 -199541890 + AT_rich Low_complexity Low_complexity 1 22 0 18756 73 7 3 chr2 51147988 51151372 -199536482 + L1PA6 LINE L1 2771 6153 -1 367 368 53 13 chr2 51151674 51151902 -199535952 + L1M4 LINE L1 4742 4978 -1168 232 305 57 9 chr2 51152285 51152390 -199535464 - LTR67 LTR ERVL 0 557 448 1870 276 76 38 chr2 51153310 51154163 -199533691 - L1ME3A LINE L1 -26 6144 5259 280 219 37 0 chr2 51154350 51154432 -199533422 + (TG)n Simple_repeat Simple_repeat 2 86 0 354 333 0 0 chr2 51154447 51154603 -199533251 - L1ME3A LINE L1 -1208 4938 4783 2104 133 3 0 chr2 51154739 51155040 -199532814 - AluSx SINE Alu -8 304 3 6225 76 19 22 chr2 51155104 51155481 -199532373 + L1PA7 LINE L1 5089 5466 -688 2148 93 7 0 chr2 51155481 51155796 -199532058 + AluY SINE Alu 1 317 0 6225 76 19 22 chr2 51155796 51156473 -199531381 + L1PA7 LINE L1 5466 6141 -13 239 239 11 109 chr2 51156943 51157035 -199530819 + L2 LINE L2 3190 3272 0 283 292 92 42 chr2 51157236 51157596 -199530258 - L1MC5 LINE L1 -81 7880 7503 492 232 117 106 chr2 51157931 51158564 -199529290 - L1MD3 LINE L1 -742 7219 6625 25 0 0 0 chr2 51158801 51158826 -199529028 + AT_rich Low_complexity Low_complexity 1 25 0 311 300 139 38 chr2 51158931 51159198 -199528656 + HAL1 LINE L1 1611 1904 -603 199 162 27 0 chr2 51159542 51159579 -199528275 - MIR SINE MIR -98 164 127 1935 169 19 13 chr2 51159756 51160129 -199527725 - THE1C LTR MaLR 0 375 1 409 305 99 20 chr2 51161143 51161625 -199526229 + L1M4c LINE L1 1248 1924 -4639 23 54 0 0 chr2 51161688 51161725 -199526129 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 51162305 51162333 -199525521 + AT_rich Low_complexity Low_complexity 1 28 0 26 88 0 0 chr2 51162472 51162540 -199525314 + AT_rich Low_complexity Low_complexity 1 68 0 1605 217 14 14 chr2 51162574 51162938 -199524916 + MLT1A1 LTR MaLR 1 364 -1 1963 112 14 24 chr2 51163042 51163338 -199524516 - AluSx SINE Alu -16 296 4 488 301 23 17 chr2 51163431 51163607 -199524247 - MER5B DNA MER1_type -1 177 1 27 62 0 0 chr2 51163908 51163956 -199523898 + AT_rich Low_complexity Low_complexity 1 48 0 24 0 0 0 chr2 51163997 51164021 -199523833 + AT_rich Low_complexity Low_complexity 1 24 0 378 0 0 0 chr2 51164253 51164295 -199523559 + (TA)n Simple_repeat Simple_repeat 2 43 0 30 0 0 0 chr2 51164366 51164396 -199523458 + AT_rich Low_complexity Low_complexity 1 30 0 462 296 82 27 chr2 51164879 51165210 -199522644 - L1MEc LINE L1 -6011 385 37 260 277 0 21 chr2 51165216 51165310 -199522544 + A-rich Low_complexity Low_complexity 2 93 0 23 54 0 0 chr2 51165551 51165588 -199522266 + AT_rich Low_complexity Low_complexity 1 37 0 2125 98 3 16 chr2 51165681 51165986 -199521868 - AluSq SINE Alu -12 301 1 654 141 85 106 chr2 51165993 51166192 -199521662 - L1MA8 LINE L1 -3 6288 6094 * 1709 143 52 68 chr2 51166189 51166574 -199521280 + L1MA7 LINE L1 5645 6023 -268 2287 104 0 0 chr2 51167109 51167416 -199520438 + AluSq SINE Alu 1 307 -6 23 0 0 0 chr2 51167512 51167535 -199520319 + AT_rich Low_complexity Low_complexity 1 23 0 1463 268 90 30 chr2 51167645 51168269 -199519585 + L1MEc LINE L1 36 696 -5700 617 294 110 70 chr2 51170618 51170990 -199516864 + L1MC5 LINE L1 5531 5887 -2074 2015 115 31 3 chr2 51170990 51171277 -199516577 + AluSx SINE Alu 1 295 -17 617 294 110 70 chr2 51171277 51172506 -199515348 + L1MC5 LINE L1 5887 7221 -740 226 148 93 0 chr2 51172475 51172529 -199515325 + L1MC4 LINE L1 7190 7248 -794 * 210 37 0 0 chr2 51172688 51172715 -199515139 + (CAA)n Simple_repeat Simple_repeat 1 27 0 250 300 73 41 chr2 51172726 51172946 -199514908 + L1MC5 LINE L1 7309 7535 -426 458 289 81 28 chr2 51172988 51173272 -199514582 + L1MC5 LINE L1 7612 7910 -51 22 56 0 0 chr2 51173303 51173339 -199514515 + AT_rich Low_complexity Low_complexity 1 36 0 288 0 0 0 chr2 51173749 51173781 -199514073 + (CA)n Simple_repeat Simple_repeat 2 33 0 191 218 18 0 chr2 51176480 51176535 -199511319 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 243 0 0 0 chr2 51176659 51176686 -199511168 + (CTA)n Simple_repeat Simple_repeat 1 27 0 189 0 0 0 chr2 51177899 51177920 -199509934 + (A)n Simple_repeat Simple_repeat 1 21 0 503 281 114 19 chr2 51178124 51178334 -199509520 - MIR SINE MIR 0 262 33 511 292 104 34 chr2 51178350 51178685 -199509169 + L2 LINE L2 2698 3304 -9 291 220 9 18 chr2 51178686 51178795 -199509059 + GA-rich Low_complexity Low_complexity 1 108 0 265 294 64 9 chr2 51179220 51179329 -199508525 - MIR SINE MIR 0 262 148 3423 160 21 14 chr2 51180642 51181150 -199506704 - L1MA6 LINE L1 -5 6295 5779 192 77 0 0 chr2 51181150 51181176 -199506678 + (TA)n Simple_repeat Simple_repeat 1 26 0 3423 160 21 14 chr2 51181176 51181330 -199506524 - L1MA6 LINE L1 -521 5779 5628 9178 249 48 14 chr2 51181323 51182933 -199504921 - L1M4 LINE L1 -833 6732 5179 180 0 0 0 chr2 51182933 51182953 -199504901 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 9178 249 48 14 chr2 51182953 51184505 -199503349 - L1M4 LINE L1 -2386 5179 3462 226 97 0 0 chr2 51184505 51184536 -199503318 + (TTCC)n Simple_repeat Simple_repeat 4 34 0 351 70 0 56 chr2 51184540 51184611 -199503243 + (TTTCC)n Simple_repeat Simple_repeat 5 71 0 519 199 0 35 chr2 51184621 51184792 -199503062 + CT-rich Low_complexity Low_complexity 1 165 0 5976 149 43 12 chr2 51184793 51186130 -199501724 - L1M4 LINE L1 -4068 3497 2202 1660 193 20 0 chr2 51186130 51186431 -199501423 - AluJb SINE Alu -5 307 1 5976 149 43 12 chr2 51186431 51187656 -199500198 - L1M4 LINE L1 -5363 2202 650 231 36 0 0 chr2 51187656 51187684 -199500170 + (TCTCC)n Simple_repeat Simple_repeat 4 31 0 5976 149 43 12 chr2 51187684 51188346 -199499508 - L1M4 LINE L1 -6915 650 10 1252 180 29 7 chr2 51188343 51188615 -199499239 - L1MA6 LINE L1 -865 5281 5004 * 7932 170 43 4 chr2 51188615 51190192 -199497662 + L1MA6 LINE L1 3356 4994 -1152 355 178 27 27 chr2 51190436 51190509 -199497345 + Tigger2a DNA MER2_type 1 73 -361 628 223 16 0 chr2 51190573 51190694 -199497160 + FRAM SINE Alu 31 153 -23 867 206 0 7 chr2 51190696 51190851 -199497003 - MER8 DNA MER2_type -84 155 2 661 22 0 22 chr2 51191166 51191255 -199496599 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 3438 136 39 3 chr2 51191574 51192163 -199495691 + LTR38B LTR ERV1 1 610 0 968 290 102 44 chr2 51192726 51193719 -199494135 + HAL1b LINE L1 251 1300 -48 781 247 22 0 chr2 51193807 51193989 -199493865 + MSTD LTR MaLR 1 186 -210 323 137 0 0 chr2 51193997 51194048 -199493806 + L1PB4 LINE L1 5858 5908 -248 2050 137 139 5 chr2 51194051 51194424 -199493430 + MSTA LTR MaLR 1 423 -5 1237 171 25 0 chr2 51194426 51194671 -199493183 + L1PB4 LINE L1 5904 6154 -2 399 274 65 28 chr2 51194678 51194893 -199492961 + L1MEc LINE L1 2216 2438 -3958 360 0 0 0 chr2 51194956 51194996 -199492858 + (CA)n Simple_repeat Simple_repeat 1 40 0 390 336 0 0 chr2 51195081 51195197 -199492657 + L2 LINE L2 3193 3308 -5 349 153 0 0 chr2 51195309 51195368 -199492486 + MSTD LTR MaLR 336 394 -2 328 299 24 24 chr2 51195375 51195502 -199492352 - MLT1I LTR MaLR -33 376 250 194 220 17 0 chr2 51195912 51195971 -199491883 + CT-rich Low_complexity Low_complexity 2 61 0 8450 99 7 5 chr2 51196230 51197447 -199490407 - L1PA7 LINE L1 -1441 4705 3486 6810 69 3 1 chr2 51197448 51198893 -199488961 + L1PA7 LINE L1 4713 6154 0 485 222 42 7 chr2 51198893 51199037 -199488817 + Charlie2 DNA MER1_type 2140 2288 -574 375 321 36 22 chr2 51199057 51199281 -199488573 + L1MC/D LINE L1 5527 5753 -2055 709 87 0 0 chr2 51200163 51200255 -199487599 + L1PA4 LINE L1 1 92 -6054 38037 42 5 1 chr2 51200259 51205770 -199482084 + L1PA4 LINE L1 623 6153 -2 261 257 152 19 chr2 51207281 51207386 -199480468 - MLT1F LTR MaLR -16 526 408 618 314 38 0 chr2 51207897 51208080 -199479774 - MIR SINE MIR -27 235 42 306 106 0 0 chr2 51208080 51208127 -199479727 + (CA)n Simple_repeat Simple_repeat 1 47 0 618 314 38 0 chr2 51208127 51208153 -199479701 - MIR SINE MIR -220 42 18 3105 167 11 11 chr2 51208154 51208700 -199479154 + MER89 LTR ERV1 5 550 -9 335 370 17 0 chr2 51209024 51209143 -199478711 - MIR SINE MIR -114 148 28 13325 206 47 33 chr2 51209503 51211503 -199476351 + L1MA4A LINE L1 4 1975 -5030 2148 124 13 0 chr2 51211503 51211809 -199476045 + AluSg SINE Alu 1 310 0 13325 206 47 33 chr2 51211809 51212322 -199475532 + L1MA4A LINE L1 1975 2479 -4526 2847 7 0 0 chr2 51212322 51212630 -199475224 + AluYa5 SINE Alu 1 308 -3 13325 206 47 33 chr2 51212630 51217014 -199470840 + L1MA4A LINE L1 2479 6998 -7 2614 46 0 0 chr2 51217491 51217793 -199470061 - AluY SINE Alu -9 302 1 2608 202 75 32 chr2 51221073 51221830 -199466024 - L1MC4 LINE L1 -190 7852 7063 849 324 29 39 chr2 51221938 51222349 -199465505 + LTR16B LTR ERVL 58 464 0 467 171 12 0 chr2 51222355 51222437 -199465417 - L1MC4 LINE L1 -1025 7017 6935 1491 204 86 49 chr2 51222442 51222933 -199464921 - L1MD2 LINE L1 -15 6344 5836 605 228 116 9 chr2 51222952 51223167 -199464687 - L1MC4 LINE L1 -787 7255 7018 893 210 28 83 chr2 51223208 51223498 -199464356 - L1MD2 LINE L1 -423 5819 5546 1133 275 128 34 chr2 51223501 51224111 -199463743 - L1MC4a LINE L1 -943 6865 6199 207 189 0 0 chr2 51224136 51224173 -199463681 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 3292 148 50 2 chr2 51224645 51225185 -199462669 + MER6A DNA MER2_type 40 605 0 501 255 60 17 chr2 51225195 51225509 -199462345 - L1ME LINE L1 -567 5603 5280 227 322 85 12 chr2 51225725 51225983 -199461871 - L1ME LINE L1 -1113 5033 4757 426 294 69 13 chr2 51226015 51226393 -199461461 - L1ME LINE L1 -1443 4703 4305 2140 114 73 23 chr2 51226401 51226743 -199461111 + THE1B LTR MaLR 1 359 -5 989 319 44 31 chr2 51226744 51226877 -199460977 - L1ME LINE L1 -1854 4292 4162 225 108 0 0 chr2 51226877 51226914 -199460940 + (TA)n Simple_repeat Simple_repeat 1 37 0 989 319 44 31 chr2 51226914 51227464 -199460390 - L1ME LINE L1 -1984 4162 3600 1066 207 0 5 chr2 51227466 51227679 -199460175 + MER67D LTR ERV1 1 212 -302 1569 287 68 48 chr2 51227856 51228496 -199459358 - HAL1 LINE L1 -563 1944 1267 1904 115 23 40 chr2 51228496 51228800 -199459054 - AluSg SINE Alu -11 299 1 1569 287 68 48 chr2 51228800 51229381 -199458473 - HAL1 LINE L1 -1240 1267 699 2252 98 3 7 chr2 51230305 51230612 -199457242 + AluSp SINE Alu 1 306 -7 348 333 109 0 chr2 51230908 51231064 -199456790 - HAL1 LINE L1 -2050 457 285 313 229 107 61 chr2 51231828 51231959 -199455895 - MIR SINE MIR -9 253 117 306 0 0 0 chr2 51232304 51232338 -199455516 + (CACAT)n Simple_repeat Simple_repeat 2 35 0 23 54 0 0 chr2 51232437 51232474 -199455380 + AT_rich Low_complexity Low_complexity 1 37 0 28 0 0 0 chr2 51232709 51232737 -199455117 + AT_rich Low_complexity Low_complexity 1 28 0 1128 124 83 0 chr2 51234769 51234986 -199452868 + L1MA9 LINE L1 6078 6312 0 242 243 146 42 chr2 51234988 51235132 -199452722 - L3 LINE CR1 -16 1561 1403 206 366 15 53 chr2 51236558 51236689 -199451165 + L2 LINE L2 3142 3267 -5 371 267 121 42 chr2 51236808 51236973 -199450881 - MER5B DNA MER1_type 0 178 1 1317 214 40 56 chr2 51237404 51237691 -199450163 + L1MD3 LINE L1 6737 7018 -977 1792 203 3 22 chr2 51237691 51238061 -199449793 + MLT1A1 LTR MaLR 3 365 0 1317 214 40 56 chr2 51238061 51238147 -199449707 + L1MD3 LINE L1 7018 7104 -891 287 283 11 11 chr2 51238147 51238239 -199449615 + MLT1F1 LTR MaLR 24 115 -452 6199 73 42 11 chr2 51238251 51239874 -199447980 + L1PA7 LINE L1 4505 6154 0 266 348 154 27 chr2 51239894 51240561 -199447293 - L2 LINE L2 -630 2684 1933 205 359 48 0 chr2 51240927 51241030 -199446824 + MIR SINE MIR 31 138 -70 2507 65 0 0 chr2 51243817 51244125 -199443729 - AluY SINE Alu -3 308 1 418 359 0 8 chr2 51244275 51244406 -199443448 + MER5A DNA MER1_type 4 133 -56 2351 103 0 3 chr2 51245496 51245806 -199442048 + AluY SINE Alu 3 311 0 612 223 25 64 chr2 51246171 51246328 -199441526 + MER58A DNA MER1_type 25 175 -49 231 222 28 83 chr2 51246339 51246383 -199441471 + MER58B DNA MER1_type 268 308 -2112 2255 136 8 8 chr2 51246383 51246737 -199441117 - THE1A LTR MaLR 0 355 2 231 222 28 83 chr2 51246737 51246764 -199441090 + MER58B DNA MER1_type 308 335 -6 594 331 54 11 chr2 51246768 51247309 -199440545 - ERVL LTR ERVL -2106 2927 2267 729 317 125 62 chr2 51247348 51247750 -199440104 + L1M3d LINE L1 418 665 -5638 411 68 0 0 chr2 51247750 51247809 -199440045 + (CA)n Simple_repeat Simple_repeat 1 59 0 729 317 125 62 chr2 51247809 51248241 -199439613 + L1M3d LINE L1 665 1068 -5235 2080 149 16 16 chr2 51248401 51248776 -199439078 - THE1C LTR MaLR 0 375 1 9634 135 35 12 chr2 51248781 51250320 -199437534 - THE1C-int LTR MaLR -6 1574 1 1764 190 35 16 chr2 51250320 51250688 -199437166 - THE1C LTR MaLR 0 375 1 4773 255 55 24 chr2 51250692 51253812 -199434042 + L1M3 LINE L1 777 3982 -2400 1834 167 33 13 chr2 51253814 51254143 -199433711 + MER2 DNA MER2_type 2 342 -3 1990 157 31 22 chr2 51254145 51254559 -199433295 + L1M3 LINE L1 3981 4398 -1984 2025 189 17 8 chr2 51254627 51255278 -199432576 + L1M3 LINE L1 5255 5909 -495 1020 158 46 62 chr2 51255278 51255442 -199432412 + L1MA3 LINE L1 17 177 -7388 2270 91 0 13 chr2 51255442 51255750 -199432104 + AluY SINE Alu 1 304 -7 1020 158 46 62 chr2 51255750 51255825 -199432029 + L1MA3 LINE L1 177 252 -7313 14002 181 22 15 chr2 51255825 51257248 -199430606 + L1MA3 LINE L1 1681 3093 -4472 3539 172 5 64 chr2 51257248 51257982 -199429872 + LTR8 LTR ERV1 1 691 0 14002 181 22 15 chr2 51257982 51259594 -199428260 + L1MA3 LINE L1 3093 4693 -2872 1444 235 7 0 chr2 51259594 51259888 -199427966 + AluJb SINE Alu 1 296 -16 14002 181 22 15 chr2 51259888 51261889 -199425965 + L1MA3 LINE L1 4693 6751 -814 2974 89 16 33 chr2 51261893 51262344 -199425510 - MLT2A1 LTR ERVL 0 444 2 14650 79 16 4 chr2 51262346 51264275 -199423579 - HERVL-A1 LTR ERVL 0 5654 3703 6417 71 2 5 chr2 51264276 51265138 -199422716 - L1P LINE L1 -2570 3576 2715 6817 63 9 1 chr2 51265138 51266386 -199421468 + L1PA4 LINE L1 4901 6155 0 6417 71 2 5 chr2 51266386 51266408 -199421446 - L1P LINE L1 -3431 2715 2694 4035 84 2 0 chr2 51266410 51266932 -199420922 - HERVL-A1 LTR ERVL -1959 3695 3173 * 9188 81 11 1 chr2 51266922 51268115 -199419739 - HERVL-A1 LTR ERVL -4449 1205 1 2789 95 82 5 chr2 51268115 51268527 -199419327 - MLT2A1 LTR ERVL 0 444 1 4309 128 10 0 chr2 51268533 51269211 -199418643 + L1MA3 LINE L1 6757 7441 -283 482 336 58 12 chr2 51269353 51269594 -199418260 - ERVL LTR ERVL -3498 2266 2015 723 300 81 21 chr2 51269872 51270588 -199417266 - L1M4 LINE L1 -2284 3862 3104 728 291 102 45 chr2 51271928 51272350 -199415504 + MLT1J LTR MaLR 3 448 -63 2631 110 5 5 chr2 51272499 51272873 -199414981 - THE1C LTR MaLR 0 375 2 556 301 72 5 chr2 51274814 51275007 -199412847 - MIR SINE MIR 0 262 57 21 0 0 0 chr2 51275116 51275137 -199412717 + AT_rich Low_complexity Low_complexity 1 21 0 219 328 258 0 chr2 51275928 51276056 -199411798 - L2 LINE L2 0 3272 3112 704 281 66 29 chr2 51276335 51276577 -199411277 - MIR SINE MIR 0 262 12 691 289 78 12 chr2 51276733 51276975 -199410879 + MIR SINE MIR 4 261 -1 181 344 16 0 chr2 51277248 51277312 -199410542 - MIR SINE MIR -102 106 42 188 296 0 56 chr2 51277518 51277589 -199410265 + MIR SINE MIR 59 125 -137 342 291 41 41 chr2 51278859 51279023 -199408831 - MIR3 SINE MIR -23 185 21 1497 198 88 42 chr2 51281403 51281756 -199406098 - MER93b LTR ERV1 0 373 5 183 409 66 57 chr2 51282468 51282786 -199405068 - L2 LINE L2 -9 3263 2943 273 197 0 0 chr2 51285723 51285784 -199402070 + CT-rich Low_complexity Low_complexity 2 62 0 429 304 7 14 chr2 51287949 51288087 -199399767 + MIR SINE MIR 122 258 -4 24 32 0 0 chr2 51288130 51288161 -199399693 + AT_rich Low_complexity Low_complexity 1 31 0 444 299 70 6 chr2 51288168 51288325 -199399529 + MIR3 SINE MIR 37 203 -5 234 0 0 0 chr2 51288495 51288521 -199399333 + (A)n Simple_repeat Simple_repeat 1 26 0 6328 135 40 2 chr2 51290248 51291584 -199396270 - L1MA3 LINE L1 0 6305 4919 263 303 7 39 chr2 51291736 51291891 -199395963 + HAL1 LINE L1 1219 1368 -1139 478 315 71 25 chr2 51291893 51292131 -199395723 - MIR SINE MIR 0 262 14 2783 3 0 3 chr2 51292419 51292723 -199395131 - AluYa5 SINE Alu -8 303 1 272 309 27 20 chr2 51293328 51293477 -199394377 + HAL1b LINE L1 749 898 -450 23 0 0 0 chr2 51295489 51295512 -199392342 + AT_rich Low_complexity Low_complexity 1 23 0 2081 125 0 0 chr2 51295514 51295802 -199392052 + AluSx SINE Alu 1 288 -24 301 305 0 0 chr2 51295807 51295889 -199391965 + L1MC4 LINE L1 6614 6695 -1347 273 119 0 0 chr2 51295889 51295931 -199391923 + (TG)n Simple_repeat Simple_repeat 2 43 0 24 32 0 0 chr2 51296894 51296925 -199390929 + AT_rich Low_complexity Low_complexity 1 31 0 261 305 74 64 chr2 51297171 51297374 -199390480 - L2 LINE L2 -208 3064 2860 3975 116 49 92 chr2 51297769 51298589 -199389265 - LTR1 LTR ERV1 0 785 1 1974 179 17 8 chr2 51299408 51299761 -199388093 + MLT1A1 LTR MaLR 10 365 0 444 337 58 11 chr2 51299799 51299989 -199387865 - L2 LINE L2 -234 3079 2881 210 37 0 0 chr2 51300127 51300154 -199387700 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2136 158 42 42 chr2 51300757 51300860 -199386994 - Tigger2a DNA MER2_type -2282 426 324 3345 80 30 0 chr2 51300860 51301300 -199386554 + MLT2A2 LTR ERVL 1 453 0 2136 158 42 42 chr2 51301300 51301621 -199386233 - Tigger2a DNA MER2_type -2383 325 2 324 0 0 0 chr2 51301622 51301658 -199386196 + (TG)n Simple_repeat Simple_repeat 1 36 0 22 70 0 0 chr2 51301668 51301711 -199386143 + AT_rich Low_complexity Low_complexity 1 43 0 243 271 241 48 chr2 51301758 51301924 -199385930 - MIR SINE MIR -1 261 64 216 238 0 0 chr2 51302034 51302097 -199385757 + GA-rich Low_complexity Low_complexity 1 63 0 241 189 38 0 chr2 51302186 51302239 -199385615 + L2 LINE L2 3217 3271 -1 995 200 82 95 chr2 51303529 51303919 -199383935 - MLT1B LTR MaLR -4 386 2 860 213 0 0 chr2 51304175 51304349 -199383505 + L1P LINE L1 4929 5102 -1044 250 267 19 86 chr2 51304350 51304455 -199383399 + MIR SINE MIR 63 160 -102 906 200 94 0 chr2 51304487 51304657 -199383197 + MER21B LTR ERV1 309 494 -369 1716 184 0 17 chr2 51304679 51304972 -199382882 + AluJb SINE Alu 1 288 -24 399 342 26 8 chr2 51305647 51305764 -199382090 - L2 LINE L2 -20 3252 3134 515 293 147 0 chr2 51306520 51306745 -199381109 - MIR SINE MIR 0 262 5 387 0 0 0 chr2 51306803 51306846 -199381008 + (TTA)n Simple_repeat Simple_repeat 3 45 0 6724 70 13 0 chr2 51306846 51308294 -199379560 - L1PA6 LINE L1 -18 6136 4680 2524 246 51 25 chr2 51308471 51309319 -199378535 + L1ME1 LINE L1 5302 6331 -3 519 60 0 0 chr2 51310088 51310155 -199377699 + (TATATG)n Simple_repeat Simple_repeat 3 69 0 207 280 0 0 chr2 51310489 51310539 -199377315 + (CATATA)n Simple_repeat Simple_repeat 5 54 0 1134 167 14 19 chr2 51311649 51311865 -199375989 + L1PB3 LINE L1 5937 6151 -3 202 182 0 0 chr2 51311865 51311898 -199375956 + (TG)n Simple_repeat Simple_repeat 2 34 0 1680 174 130 21 chr2 51312068 51312453 -199375401 + MSTA LTR MaLR 1 427 -1 9414 141 12 33 chr2 51312456 51314067 -199373787 + MSTA-int LTR MaLR 3 1579 -1 1631 161 128 36 chr2 51314068 51314460 -199373394 + MSTA LTR MaLR 1 428 0 1766 133 6 81 chr2 51314573 51314896 -199372958 + AluSx SINE Alu 1 299 -13 570 256 39 0 chr2 51315020 51315176 -199372678 + L1MB7 LINE L1 6000 6161 -23 567 282 161 10 chr2 51315286 51315591 -199372263 - L1MDb LINE L1 -5284 1125 775 22 0 0 0 chr2 51316609 51316631 -199371223 + AT_rich Low_complexity Low_complexity 1 22 0 1520 212 116 8 chr2 51316683 51317037 -199370817 + MSTD LTR MaLR 5 396 0 280 305 61 30 chr2 51319632 51319763 -199368091 + L2 LINE L2 3169 3303 -10 211 200 0 0 chr2 51319805 51319850 -199368004 + (TGGA)n Simple_repeat Simple_repeat 4 48 0 384 291 24 24 chr2 51319851 51319978 -199367876 - MIR3 SINE MIR -8 200 74 597 274 25 66 chr2 51320587 51320784 -199367070 - MER91A DNA MER1_type 0 196 8 221 242 65 0 chr2 51320793 51320855 -199366999 - MIR SINE MIR -98 164 99 212 122 24 0 chr2 51320996 51321037 -199366817 + CT-rich Low_complexity Low_complexity 2 43 0 369 247 34 0 chr2 51322210 51322299 -199365555 - MER5A DNA MER1_type -80 109 18 264 30 0 0 chr2 51323425 51323458 -199364396 + (CA)n Simple_repeat Simple_repeat 2 34 0 343 368 98 15 chr2 51323747 51323951 -199363903 - L3b LINE CR1 -5 1578 1358 22 35 0 0 chr2 51324053 51324082 -199363772 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr2 51325017 51325047 -199362807 + AT_rich Low_complexity Low_complexity 1 30 0 2309 93 0 0 chr2 51325109 51325419 -199362435 - AluY SINE Alu -1 310 1 484 250 36 18 chr2 51326265 51326377 -199361477 + L2 LINE L2 3155 3268 -4 289 341 12 0 chr2 51327478 51327563 -199360291 - L2 LINE L2 -1 3312 3227 1892 140 14 0 chr2 51329186 51329479 -199358375 + AluSg SINE Alu 1 297 -13 21 0 0 0 chr2 51329505 51329526 -199358328 + AT_rich Low_complexity Low_complexity 1 21 0 203 175 25 0 chr2 51329671 51329711 -199358143 + CT-rich Low_complexity Low_complexity 2 42 0 29 84 0 0 chr2 51330005 51330076 -199357778 + AT_rich Low_complexity Low_complexity 1 71 0 460 303 0 8 chr2 51330218 51330337 -199357517 + L2 LINE L2 3196 3313 0 3781 118 64 26 chr2 51330526 51331606 -199356248 + MER11A LTR ERVK 1 1232 -4 320 245 118 10 chr2 51331634 51331736 -199356118 - MIR SINE MIR -65 197 85 1304 150 19 9 chr2 51331905 51332118 -199355736 + AluSg/x SINE Alu 89 303 -9 24 32 0 0 chr2 51333370 51333401 -199354453 + AT_rich Low_complexity Low_complexity 1 31 0 1990 286 161 30 chr2 51333533 51334579 -199353275 - L2 LINE L2 -1335 1979 797 782 285 14 67 chr2 51334584 51334942 -199352912 + L2 LINE L2 2968 3306 -7 245 114 0 0 chr2 51336160 51336195 -199351659 + MIR SINE MIR 110 144 -64 2258 102 0 16 chr2 51336924 51337238 -199350616 + AluSg SINE Alu 1 309 -1 494 256 51 26 chr2 51338653 51338809 -199349045 - MLT1I LTR MaLR -1 408 249 184 361 76 17 chr2 51339650 51339769 -199348085 + L2 LINE L2 3137 3262 -10 298 273 157 47 chr2 51339976 51340148 -199347706 + MIR SINE MIR 1 191 -71 311 260 140 85 chr2 51340896 51341096 -199346758 + MIR SINE MIR 23 233 -29 1813 199 16 110 chr2 51341330 51341527 -199346327 + MLT1D LTR MaLR 12 226 -279 2169 117 10 0 chr2 51341527 51341826 -199346028 + AluSq SINE Alu 1 302 -11 1813 199 16 110 chr2 51341826 51342172 -199345682 + MLT1D LTR MaLR 226 504 -1 258 32 0 0 chr2 51343817 51343848 -199344006 + (TC)n Simple_repeat Simple_repeat 2 32 0 346 188 21 62 chr2 51343848 51343944 -199343910 - L1MC4 LINE L1 -1337 6705 6614 200 35 35 0 chr2 51344080 51344109 -199343745 + (TG)n Simple_repeat Simple_repeat 1 30 0 317 313 62 16 chr2 51344467 51344595 -199343259 - MER94 DNA DNA 0 134 1 445 347 34 0 chr2 51344841 51345017 -199342837 + MIR SINE MIR 73 254 -8 506 209 234 0 chr2 51345149 51345307 -199342547 + MIR SINE MIR 65 259 -3 1061 292 174 35 chr2 51346998 51347689 -199340165 + L2 LINE L2 2352 3186 -127 2439 75 0 0 chr2 51347689 51347995 -199339859 - AluY SINE Alu -5 306 1 1061 292 174 35 chr2 51347995 51348144 -199339710 + L2 LINE L2 3186 3313 0 488 213 90 25 chr2 51349798 51349920 -199337934 - MIR SINE MIR -68 194 65 569 308 37 53 chr2 51351274 51351573 -199336281 - LTR16A1 LTR ERVL 0 457 164 1333 299 89 44 chr2 51351881 51352747 -199335107 - L2 LINE L2 0 3313 2410 650 312 188 16 chr2 51353609 51354099 -199333755 + L2 LINE L2 1202 1775 -1539 5196 136 16 0 chr2 51354103 51355114 -199332740 - L1PA15 LINE L1 -5 6160 5152 446 169 2 0 chr2 51355114 51355217 -199332637 + L1 LINE L1 4966 5069 -1077 339 331 151 18 chr2 51355217 51355549 -199332305 + L2 LINE L2 1787 2162 -1152 2721 171 54 78 chr2 51357029 51357737 -199330117 + LTR8 LTR ERV1 1 691 0 450 229 62 35 chr2 51357824 51357968 -199329886 - Charlie8 DNA MER1_type -2171 246 99 7843 10 0 0 chr2 51358052 51359314 -199328540 - L1PA2 LINE L1 -2 6153 4892 180 0 0 0 chr2 51359603 51359623 -199328231 + (T)n Simple_repeat Simple_repeat 1 20 0 882 236 6 6 chr2 51359629 51359803 -199328051 - MER58A DNA MER1_type -48 176 3 5932 192 24 8 chr2 51365218 51367443 -199320411 - L1PA16 LINE L1 -10 6156 3903 195 300 175 0 chr2 51368818 51368898 -199318956 + MIR SINE MIR 53 146 -116 2692 218 116 32 chr2 51369323 51370203 -199317651 + L1MC4a LINE L1 6855 7808 0 463 260 28 50 chr2 51370308 51370489 -199317365 + MER69A DNA AcHobo 1 177 0 684 215 0 0 chr2 51372833 51372954 -199314900 - FLAM_C SINE Alu -11 132 12 2177 110 0 10 chr2 51372981 51373289 -199314565 - AluSg SINE Alu -5 305 1 483 275 86 74 chr2 51374070 51374314 -199313540 + MIR SINE MIR 1 247 -15 204 150 0 25 chr2 51376573 51376613 -199311241 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr2 51376916 51376937 -199310917 + AT_rich Low_complexity Low_complexity 1 21 0 296 189 53 32 chr2 51377030 51377125 -199310729 + GA-rich Low_complexity Low_complexity 4 100 0 290 298 149 9 chr2 51377845 51377959 -199309895 + L2 LINE L2 3184 3313 0 217 316 44 52 chr2 51377982 51378118 -199309736 + L2 LINE L2 2918 3052 -220 2997 104 28 0 chr2 51378347 51378779 -199309075 + MLT2A1 LTR ERVL 1 444 0 1449 171 87 78 chr2 51379261 51379594 -199308260 + MLT1B LTR MaLR 54 389 -1 495 213 139 0 chr2 51379607 51379729 -199308125 + MIR SINE MIR 124 262 0 264 291 43 50 chr2 51380695 51380836 -199307018 + MIR SINE MIR 67 206 -56 183 196 0 43 chr2 51381383 51381429 -199306425 + MIR SINE MIR 102 145 -117 337 286 8 16 chr2 51381956 51382082 -199305772 - MER110 LTR ERV1 -14 477 353 8848 237 53 29 chr2 51382727 51387292 -199300562 - L1PA12 LINE L1 -4150 3434 1 1493 186 29 7 chr2 51387301 51387575 -199300279 - THE1-int LTR MaLR -303 1277 998 3405 185 6 24 chr2 51387576 51388236 -199299618 - MSTB-int LTR MaLR -1003 648 1 2475 176 9 9 chr2 51388236 51388662 -199299192 - MSTB LTR MaLR 0 426 1 1806 236 60 10 chr2 51388663 51389066 -199298788 + MER21B LTR ERV1 428 850 -13 2768 16 0 0 chr2 51389345 51389658 -199298196 + AluYb8 SINE Alu 1 313 -5 1017 227 84 50 chr2 51389987 51390316 -199297538 + MSTD LTR MaLR 1 346 -50 238 26 51 0 chr2 51390316 51390355 -199297499 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 1017 227 84 50 chr2 51390355 51390408 -199297446 + MSTD LTR MaLR 346 396 0 1992 99 0 4 chr2 51440773 51441036 -199246818 + AluSq SINE Alu 32 293 -20 295 49 98 0 chr2 51441036 51441077 -199246777 - MSTC LTR MaLR -383 45 1 394 211 171 49 chr2 51441078 51441324 -199246530 + HAL1 LINE L1 712 987 -1520 501 256 137 30 chr2 51441324 51441348 -199246506 + L1M4 LINE L1 4739 4759 -1387 2177 109 3 3 chr2 51441348 51441642 -199246212 + AluSq SINE Alu 1 294 -19 501 256 137 30 chr2 51441642 51441887 -199245967 + L1M4 LINE L1 4759 5037 -1109 635 179 0 0 chr2 51441889 51441995 -199245859 + AluJb SINE Alu 3 108 -204 419 252 52 0 chr2 51442115 51442230 -199245624 + L1MB7 LINE L1 5932 6052 -132 1010 158 0 29 chr2 51442230 51442401 -199245453 - FRAM SINE Alu -13 163 1 325 103 0 206 chr2 51442401 51442498 -199245356 + L1MB7 LINE L1 6051 6127 -51 807 150 71 0 chr2 51442508 51442648 -199245206 + AluJo SINE Alu 1 150 -162 275 241 0 0 chr2 51442649 51442707 -199245147 - L1M4 LINE L1 -3310 2836 2779 796 156 6 83 chr2 51442707 51442887 -199244967 + MLT1E2 LTR MaLR 1 166 -460 2310 107 3 0 chr2 51442901 51443209 -199244645 + AluSp SINE Alu 2 310 -3 540 188 8 0 chr2 51443308 51443425 -199244429 - L1MB7 LINE L1 -9 6175 6058 1475 172 4 11 chr2 51443673 51443940 -199243914 + AluJo SINE Alu 10 274 -38 498 17 0 0 chr2 51443942 51444001 -199243853 + (TC)n Simple_repeat Simple_repeat 2 60 0 315 0 0 0 chr2 51444000 51444035 -199243819 + (TG)n Simple_repeat Simple_repeat 2 36 0 * 225 0 0 0 chr2 51444034 51444059 -199243795 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 2397 62 13 3 chr2 51444140 51444448 -199243406 - AluY SINE Alu 0 311 1 2237 98 0 3 chr2 51444699 51444996 -199242858 - AluSx SINE Alu -16 296 1 1697 221 90 61 chr2 51446397 51446727 -199241127 - MLT1E1 LTR MaLR -77 577 223 737 212 6 29 chr2 51446727 51446897 -199240957 - FRAM SINE Alu 0 166 1 1697 221 90 61 chr2 51446897 51447122 -199240732 - MLT1E1 LTR MaLR -431 223 6 1690 141 3 56 chr2 51447391 51447710 -199240144 + AluSg SINE Alu 1 302 -8 413 249 11 81 chr2 51448746 51448978 -199238876 + MLT1J LTR MaLR 36 210 -199 425 202 25 34 chr2 51449053 51449172 -199238682 + MLT1J LTR MaLR 392 509 -2 355 329 148 7 chr2 51451320 51451475 -199236379 + MER5A DNA MER1_type 7 183 -6 1876 190 21 4 chr2 51451579 51452157 -199235697 - L1MA9 LINE L1 -693 5619 5031 2272 221 66 24 chr2 51452168 51452319 -199235535 + L1MA9 LINE L1 5628 5771 -541 222 37 0 0 chr2 51452319 51452346 -199235508 + (CA)n Simple_repeat Simple_repeat 2 28 0 2272 221 66 24 chr2 51452346 51452815 -199235039 + L1MA9 LINE L1 5771 6274 -38 382 237 44 22 chr2 51452866 51453001 -199234853 + L1MEd LINE L1 969 1106 -5013 916 73 0 29 chr2 51453457 51453594 -199234260 - L1PA13 LINE L1 -5 6158 6026 2038 130 10 0 chr2 51454206 51454498 -199233356 + AluSx SINE Alu 1 295 -17 312 143 0 0 chr2 51454516 51454572 -199233282 + (TA)n Simple_repeat Simple_repeat 1 56 0 333 286 0 0 chr2 51454573 51454657 -199233197 + L1MC4 LINE L1 6614 6697 -1345 231 130 0 0 chr2 51454657 51454703 -199233151 - LTR66 LTR ERVL -171 439 394 221 354 46 77 chr2 51456703 51456833 -199231021 - L2 LINE L2 -9 3263 3138 597 192 58 13 chr2 51456852 51457008 -199230846 + MER104 DNA Tc2 14 176 -4 635 209 106 70 chr2 51458181 51458222 -199229632 + LTR50 LTR ERVL 4 42 -753 2024 150 3 3 chr2 51458222 51458529 -199229325 - AluJo SINE Alu -5 307 1 635 209 106 70 chr2 51458529 51458760 -199229094 + LTR50 LTR ERVL 42 286 -509 508 249 104 52 chr2 51458781 51459050 -199228804 + LTR50 LTR ERVL 511 793 -2 311 70 0 0 chr2 51460075 51460118 -199227736 - MADE1 DNA Mariner -34 46 4 21 36 0 0 chr2 51460338 51460366 -199227488 + AT_rich Low_complexity Low_complexity 1 28 0 281 309 41 21 chr2 51460397 51460494 -199227360 + L2 LINE L2 3172 3270 -2 219 299 120 33 chr2 51460488 51460672 -199227182 - L2 LINE L2 -712 2602 2403 * 2097 102 0 3 chr2 51460686 51461012 -199226842 + AluSx SINE Alu 1 325 0 290 115 98 0 chr2 51461657 51461718 -199226136 + L1MA4 LINE L1 5961 6027 -273 936 157 12 0 chr2 51461918 51462084 -199225770 + L1MA4A LINE L1 6136 6303 0 1829 262 131 15 chr2 51462916 51463573 -199224281 + Zaphod DNA AcHobo 1 733 -3298 3404 192 55 3 chr2 51463576 51464290 -199223564 + L1MA9 LINE L1 5509 6259 -53 469 220 62 49 chr2 51464290 51464526 -199223328 + Zaphod DNA AcHobo 713 955 -3076 2362 75 0 0 chr2 51464526 51464819 -199223035 - AluY SINE Alu -18 293 1 469 220 62 49 chr2 51464819 51464886 -199222968 + Zaphod DNA AcHobo 955 1020 -3011 * 684 183 82 60 chr2 51464857 51465125 -199222729 + Zaphod DNA AcHobo 3607 3880 -151 3959 195 17 10 chr2 51465126 51465238 -199222616 + L1P4 LINE L1 4454 4564 -1602 2092 116 65 8 chr2 51465238 51465593 -199222261 + THE1C LTR MaLR 1 375 0 3959 195 17 10 chr2 51465593 51466813 -199221041 + L1P4 LINE L1 4564 5789 -377 1471 167 4 4 chr2 51466913 51467141 -199220713 - MER1B DNA MER1_type -63 234 7 22 0 0 0 chr2 51467497 51467519 -199220335 + AT_rich Low_complexity Low_complexity 1 22 0 293 239 78 99 chr2 51468214 51468356 -199219498 + L2 LINE L2 3158 3296 -17 228 184 0 0 chr2 51469165 51469214 -199218640 + (CA)n Simple_repeat Simple_repeat 2 50 0 4217 198 59 25 chr2 51469631 51471094 -199216760 - L1MD1 LINE L1 0 6242 4740 4491 80 12 0 chr2 51472504 51473107 -199214747 - L1PA8A LINE L1 -27 6104 5495 2214 67 3 11 chr2 51473433 51473716 -199214138 - AluSg SINE Alu -23 287 7 264 272 132 37 chr2 51473775 51473911 -199213943 + L2 LINE L2 3165 3313 0 198 335 114 13 chr2 51474012 51474170 -199213684 + L2 LINE L2 2566 2739 -575 613 208 0 0 chr2 51474422 51474542 -199213312 - AluSg/x SINE Alu 0 310 191 1948 111 3 68 chr2 51474592 51474917 -199212937 - AluSc SINE Alu -5 304 1 466 290 35 24 chr2 51475094 51475263 -199212591 + L2 LINE L2 3143 3313 0 197 342 53 9 chr2 51475565 51475679 -199212175 - L2 LINE L2 -2270 1044 926 3612 108 0 6 chr2 51475999 51476510 -199211344 - MER9 LTR ERVK 0 511 4 294 233 0 0 chr2 51477043 51477103 -199210751 - MLT1I LTR MaLR -10 399 340 748 217 60 12 chr2 51477103 51477269 -199210585 - MER58A DNA MER1_type -3 221 48 661 330 78 26 chr2 51477295 51477601 -199210253 - MLT1I LTR MaLR -75 334 13 21 57 0 0 chr2 51478071 51478106 -199209748 + AT_rich Low_complexity Low_complexity 1 35 0 1879 217 39 52 chr2 51478766 51479395 -199208459 - L1M LINE L1 -771 5375 4797 4147 149 14 31 chr2 51479397 51479818 -199208036 + L1PB4 LINE L1 5387 5791 -365 306 0 0 0 chr2 51479818 51479852 -199208002 + (CA)n Simple_repeat Simple_repeat 2 35 0 4147 149 14 31 chr2 51479852 51480210 -199207644 + L1PB4 LINE L1 5791 6153 -3 244 286 200 0 chr2 51481195 51481300 -199206554 + LTR50 LTR ERVL 144 269 -526 402 291 98 43 chr2 51481649 51481903 -199205951 - L1ME4a LINE L1 -206 5915 5648 432 0 0 0 chr2 51482131 51482179 -199205675 + (TA)n Simple_repeat Simple_repeat 2 49 0 568 310 88 13 chr2 51483101 51483327 -199204527 - MIR SINE MIR 0 262 20 21 0 0 0 chr2 51483335 51483356 -199204498 + AT_rich Low_complexity Low_complexity 1 21 0 255 229 21 21 chr2 51483715 51483811 -199204043 + (TA)n Simple_repeat Simple_repeat 2 97 0 525 264 108 84 chr2 51485410 51485559 -199202295 - MLT1H1 LTR MaLR -190 400 256 2184 135 3 0 chr2 51485559 51485870 -199201984 + AluSx SINE Alu 1 312 0 525 264 108 84 chr2 51485870 51486103 -199201751 - MLT1H1 LTR MaLR -334 256 6 249 33 0 0 chr2 51486137 51486167 -199201687 + (TG)n Simple_repeat Simple_repeat 2 31 0 * 288 0 0 0 chr2 51486166 51486198 -199201656 + (TA)n Simple_repeat Simple_repeat 1 32 0 271 114 171 14 chr2 51488142 51488212 -199199642 + L1PA16 LINE L1 6077 6157 -9 27 62 0 0 chr2 51489058 51489106 -199198748 + AT_rich Low_complexity Low_complexity 1 48 0 249 304 55 9 chr2 51489128 51489240 -199198614 - MIR SINE MIR -63 145 42 3467 45 4 58 chr2 51489869 51490356 -199197498 + L1PA7 LINE L1 5690 6150 -4 245 284 275 17 chr2 51491588 51491746 -199196108 - MIR SINE MIR -61 201 2 292 276 80 12 chr2 51492030 51492193 -199195661 - L1ME LINE L1 -273 5848 5675 317 313 36 0 chr2 51492204 51492316 -199195538 - L1ME LINE L1 -489 5632 5517 364 306 93 43 chr2 51492890 51493013 -199194841 - L1ME3 LINE L1 -256 5906 5791 2308 113 3 0 chr2 51493013 51493323 -199194531 + AluSq SINE Alu 3 313 0 364 306 93 43 chr2 51493323 51493477 -199194377 - L1ME3 LINE L1 -371 5791 5615 3121 92 2 0 chr2 51494553 51494987 -199192867 + L1PA10 LINE L1 5723 6157 -11 590 318 108 5 chr2 51496175 51496398 -199191456 + MIR SINE MIR 1 246 -16 187 333 152 18 chr2 51497131 51497302 -199190552 + L2 LINE L2 2866 3059 -213 228 285 42 109 chr2 51497436 51497629 -199190225 - MIR SINE MIR -71 191 12 290 307 168 15 chr2 51497635 51497772 -199190082 - MER5A DNA MER1_type -2 187 30 239 274 27 14 chr2 51497712 51497785 -199190069 + MER5A DNA MER1_type 110 183 -6 * 297 267 48 48 chr2 51497845 51497950 -199189904 + L2 LINE L2 3201 3305 -8 391 377 66 12 chr2 51498874 51499301 -199188553 + HAL1 LINE L1 12 461 -2046 22 35 0 0 chr2 51500365 51500394 -199187460 + AT_rich Low_complexity Low_complexity 1 29 0 778 346 77 12 chr2 51501089 51501597 -199186257 - MER89-int LTR ERV1 -156 6645 6105 770 227 0 7 chr2 51501869 51502023 -199185831 - LTR32 LTR ERVL -2 469 317 1233 246 84 0 chr2 51502403 51502712 -199185142 - LTR32 LTR ERVL -122 349 15 1946 155 30 0 chr2 51502804 51503107 -199184747 - AluSx SINE Alu 0 312 1 274 62 62 0 chr2 51503154 51503202 -199184652 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 270 165 138 83 chr2 51503204 51503291 -199184563 - MLT1F1 LTR MaLR -246 296 211 608 224 90 86 chr2 51503291 51503707 -199184147 - MLT1F1-int LTR MaLR -828 543 2 1293 251 76 67 chr2 51503769 51504306 -199183548 - MLT1F1 LTR MaLR 0 567 1 1093 161 38 9 chr2 51504898 51505109 -199182745 - Tigger1 DNA MER2_type 0 2418 2202 207 0 0 0 chr2 51505142 51505165 -199182689 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 864 173 7 0 chr2 51505165 51505304 -199182550 - FRAM SINE Alu -29 147 8 3637 161 86 51 chr2 51505305 51505838 -199182016 - Tigger1 DNA MER2_type -1621 797 284 2420 78 0 3 chr2 51505838 51506147 -199181707 + AluY SINE Alu 1 308 -3 3637 161 86 51 chr2 51506147 51506175 -199181679 - Tigger1 DNA MER2_type -2134 284 258 252 0 0 0 chr2 51506175 51506203 -199181651 + (TAA)n Simple_repeat Simple_repeat 3 30 0 3637 161 86 51 chr2 51506203 51506410 -199181444 - Tigger1 DNA MER2_type -2160 258 1 653 281 26 13 chr2 51506543 51506771 -199181083 + MIR SINE MIR 31 261 -1 2243 114 0 9 chr2 51508293 51508608 -199179246 + AluSx SINE Alu 1 312 0 219 265 147 88 chr2 51508821 51508923 -199178931 + L2 LINE L2 301 408 -2906 1172 191 17 25 chr2 51508986 51509222 -199178632 - MLT1A1 LTR MaLR 0 365 132 1489 189 72 13 chr2 51509323 51509629 -199178225 - MER21B LTR ERV1 -128 735 412 1039 259 80 15 chr2 51509625 51509899 -199177955 - MER21B LTR ERV1 -560 303 12 * 462 172 8 109 chr2 51509914 51510042 -199177812 - MLT1A1 LTR MaLR -228 137 23 520 243 56 14 chr2 51510071 51510215 -199177639 - MIR SINE MIR -57 205 56 718 204 24 57 chr2 51510240 51510339 -199177515 - L1MD3 LINE L1 -6 8036 7935 1946 138 145 29 chr2 51510339 51510752 -199177102 - LOR1b LTR ERV1 0 461 1 718 204 24 57 chr2 51510752 51510918 -199176936 - L1MD3 LINE L1 -107 7935 7790 456 197 101 111 chr2 51510913 51511078 -199176776 - L1MC4 LINE L1 -335 7707 7543 * 2276 114 0 13 chr2 51511078 51511394 -199176460 - AluSx SINE Alu 0 312 1 456 197 101 111 chr2 51511394 51511426 -199176428 - L1MC4 LINE L1 -499 7543 7512 271 230 40 0 chr2 51511547 51511621 -199176233 + MER69 DNA AcHobo 2450 2526 0 2211 118 0 0 chr2 51511999 51512296 -199175558 - AluSq SINE Alu -16 297 1 245 310 23 153 chr2 51512492 51512792 -199175062 + L2 LINE L2 2926 3186 -86 598 294 61 38 chr2 51512949 51513380 -199174474 - LTR33 LTR ERVL 0 521 46 887 214 6 0 chr2 51513412 51513585 -199174269 + AluJo SINE Alu 121 294 -18 350 291 76 35 chr2 51513722 51513894 -199173960 - MIR SINE MIR -10 252 74 298 357 0 14 chr2 51514496 51514636 -199173218 + L3b LINE CR1 1127 1264 -319 908 300 122 3 chr2 51514820 51515163 -199172691 + L2 LINE L2 2567 2950 -364 2175 115 0 7 chr2 51516030 51516334 -199171520 + AluSq SINE Alu 1 302 -11 267 207 0 69 chr2 51516549 51516607 -199171247 + L2 LINE L2 3258 3311 -2 263 146 0 42 chr2 51517747 51517795 -199170059 + LTR67 LTR ERVL 499 544 -13 237 188 104 94 chr2 51518200 51518296 -199169558 + L1ME3 LINE L1 6037 6133 -29 211 172 62 0 chr2 51518305 51518369 -199169485 + GA-rich Low_complexity Low_complexity 3 70 0 269 162 44 15 chr2 51518644 51518712 -199169142 - HsTC2 DNA Tc2 -21 1877 1808 229 265 132 0 chr2 51518892 51518960 -199168894 - HsTC2 DNA Tc2 -1395 503 427 433 323 146 0 chr2 51518974 51519132 -199168722 + MER5A DNA MER1_type 9 189 0 819 300 38 33 chr2 51519136 51519503 -199168351 - HsTC2 DNA Tc2 -1485 413 45 2006 42 0 0 chr2 51519853 51520089 -199167765 - AluY SINE Alu -75 236 1 383 279 115 29 chr2 51520091 51520299 -199167555 - L2 LINE L2 -1096 2218 1993 351 169 13 13 chr2 51520519 51520596 -199167258 - MER1B DNA MER1_type -1 332 256 1034 192 28 9 chr2 51520598 51520812 -199167042 - MER1B DNA MER1_type -74 223 6 230 286 29 0 chr2 51521036 51521106 -199166748 + LTR33A LTR ERVL 452 523 0 3175 325 61 37 chr2 51521112 51521311 -199166543 - L2 LINE L2 -1327 1987 1794 2120 140 3 40 chr2 51521311 51521661 -199166193 + MER1B DNA MER1_type 1 337 0 3175 325 61 37 chr2 51521661 51523272 -199164582 - L2 LINE L2 -1520 1794 49 220 435 72 0 chr2 51523854 51523992 -199163862 - L2 LINE L2 -21 3251 3104 297 0 0 0 chr2 51524377 51524410 -199163444 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2060 132 33 33 chr2 51524433 51524797 -199163057 - THE1B LTR MaLR 0 364 1 299 315 100 46 chr2 51526111 51526371 -199161483 - MERVL LTR ERVL -621 4864 4591 1069 163 0 6 chr2 51526629 51526807 -199161047 - L1PA8A LINE L1 0 6131 5955 25116 132 13 2 chr2 51526812 51531271 -199156583 - L1PA8A LINE L1 -431 6015 1511 4842 145 17 4 chr2 51531264 51532022 -199155832 - L1PA8A LINE L1 -5107 768 1 * 432 343 63 25 chr2 51532063 51532609 -199155245 - MERVL LTR ERVL -1269 3727 3411 331 338 7 7 chr2 51532837 51532976 -199154878 - MERVL LTR ERVL -2079 3406 3268 1360 311 49 37 chr2 51533178 51534078 -199153776 - MERVL LTR ERVL -2706 2779 1851 288 382 0 0 chr2 51534262 51534385 -199153469 - MERVL LTR ERVL -4125 1639 1517 312 356 53 12 chr2 51534916 51535163 -199152691 - MERVL LTR ERVL -4219 777 521 1574 147 76 57 chr2 51535973 51536193 -199151661 - THE1C LTR MaLR 0 375 143 2023 109 0 11 chr2 51536193 51536511 -199151343 + AluSx SINE Alu 1 315 0 1574 147 76 57 chr2 51536511 51536657 -199151197 - THE1C LTR MaLR -232 143 1 267 285 110 31 chr2 51537813 51538041 -199149813 - HAL1 LINE L1 -5 2502 2257 594 283 66 32 chr2 51538846 51539170 -199148684 - L1MC/D LINE L1 -528 5638 5321 1922 291 286 6 chr2 51539177 51540385 -199147469 + L2 LINE L2 1501 3070 -243 289 286 32 0 chr2 51540579 51540705 -199147149 - HAL1b LINE L1 -275 1073 944 208 333 40 13 chr2 51540709 51540784 -199147070 - MIR SINE MIR -102 106 30 1160 307 82 38 chr2 51540875 51541644 -199146210 - HAL1b LINE L1 -528 820 18 572 295 93 32 chr2 51541870 51542307 -199145547 + MLT1J LTR MaLR 6 501 -10 398 286 56 56 chr2 51542628 51542806 -199145048 + MIR SINE MIR 49 226 -36 21 0 0 0 chr2 51543334 51543355 -199144499 + AT_rich Low_complexity Low_complexity 1 21 0 896 251 21 41 chr2 51543511 51543754 -199144100 - MER8 DNA MER2_type 0 239 2 262 327 38 0 chr2 51543762 51543921 -199143933 - L1MC/D LINE L1 -1194 4952 4788 479 317 102 36 chr2 51544180 51544267 -199143587 - L1MC/D LINE L1 -1628 4518 4438 3509 186 22 40 chr2 51544267 51545066 -199142788 + LTR1 LTR ERV1 1 785 0 479 317 102 36 chr2 51545066 51545451 -199142403 - L1MC/D LINE L1 -1708 4438 4015 323 303 9 9 chr2 51545688 51545797 -199142057 - MIR SINE MIR -6 256 148 258 318 15 0 chr2 51545820 51545886 -199141968 - L2 LINE L2 -54 3259 3193 384 243 39 8 chr2 51546116 51546281 -199141573 - MER67A LTR ERV1 -3 540 330 1378 205 56 58 chr2 51546337 51546814 -199141040 - MER67B LTR ERV1 -253 408 1 22 0 0 0 chr2 51549229 51549251 -199138603 + AT_rich Low_complexity Low_complexity 1 22 0 303 318 27 20 chr2 51550018 51550166 -199137688 - MLT1L LTR MaLR -47 568 420 1501 246 75 82 chr2 51551196 51551892 -199135962 + L1ME2 LINE L1 3535 4225 -1921 2854 255 76 12 chr2 51552079 51553904 -199133950 + L1ME2 LINE L1 4229 6164 0 1741 189 20 12 chr2 51553927 51554271 -199133583 - MER7A DNA MER2_type 0 346 2 198 287 128 43 chr2 51554395 51554489 -199133365 - L2 LINE L2 -1817 1497 1396 21 0 0 0 chr2 51554832 51554853 -199133001 + AT_rich Low_complexity Low_complexity 1 21 0 183 262 167 0 chr2 51556039 51556123 -199131731 - MIR SINE MIR -2 260 163 1986 128 34 55 chr2 51556537 51556593 -199131261 + THE1C LTR MaLR 1 57 -318 2515 112 0 3 chr2 51556593 51556949 -199130905 - THE1A LTR MaLR 0 355 1 1986 128 34 55 chr2 51556949 51557275 -199130579 + THE1C LTR MaLR 57 375 0 785 291 61 4 chr2 51558396 51558643 -199129211 - MIR SINE MIR 0 262 2 1433 224 3 11 chr2 51559083 51559369 -199128485 + AluJo SINE Alu 2 285 -27 24 32 0 0 chr2 51559369 51559400 -199128454 + AT_rich Low_complexity Low_complexity 1 31 0 203 80 40 40 chr2 51559918 51559936 -199127918 + A-rich Low_complexity Low_complexity 1 18 -32 2700 19 0 3 chr2 51559936 51560248 -199127606 + AluYa5 SINE Alu 1 311 0 203 80 40 40 chr2 51560248 51560279 -199127575 + A-rich Low_complexity Low_complexity 17 50 0 24 32 0 0 chr2 51560474 51560505 -199127349 + AT_rich Low_complexity Low_complexity 1 31 0 24 53 0 0 chr2 51560658 51560696 -199127158 + AT_rich Low_complexity Low_complexity 1 38 0 1897 191 79 7 chr2 51560773 51561176 -199126678 - MSTB1 LTR MaLR 0 432 1 656 278 44 31 chr2 51561176 51561403 -199126451 - MIR SINE MIR -31 231 2 2266 124 11 27 chr2 51561493 51561863 -199125991 - THE1B LTR MaLR 0 364 1 9752 112 5 94 chr2 51561863 51563597 -199124257 - THE1B-int LTR MaLR 0 1580 1 2149 132 3 62 chr2 51563597 51563744 -199124110 - THE1B LTR MaLR 0 364 210 2169 118 3 0 chr2 51563744 51564041 -199123813 - AluSg SINE Alu -12 298 1 2149 132 3 62 chr2 51564041 51564280 -199123574 - THE1B LTR MaLR -154 210 1 531 317 40 20 chr2 51565235 51565437 -199122417 + MLT1J2 LTR MaLR 31 236 -214 272 337 0 0 chr2 51565445 51565528 -199122326 - MER63 DNA MER1_type 0 1061 979 332 221 38 2 chr2 51565528 51565619 -199122235 - MER63 DNA MER1_type -83 753 659 3543 72 24 16 chr2 51566723 51567109 -199120745 - L1PA13 LINE L1 -6 6157 5765 2590 121 0 0 chr2 51567109 51567473 -199120381 + THE1B LTR MaLR 1 364 0 3543 72 24 16 chr2 51567473 51567596 -199120258 - L1PA13 LINE L1 -398 5765 5644 514 285 49 0 chr2 51567749 51567893 -199119961 - MIR SINE MIR -55 207 57 1761 173 3 6 chr2 51568437 51568749 -199119105 + AluSx SINE Alu 1 311 -1 251 264 79 79 chr2 51568780 51568920 -199118934 - MIR3 SINE MIR -67 141 2 2290 182 26 5 chr2 51569608 51570025 -199117829 - MSTB LTR MaLR 0 426 1 254 73 24 0 chr2 51570496 51570537 -199117317 + (CA)n Simple_repeat Simple_repeat 2 43 0 2495 59 0 0 chr2 51571006 51571311 -199116543 + AluY SINE Alu 1 305 -6 327 25 0 0 chr2 51571408 51571448 -199116406 + (TG)n Simple_repeat Simple_repeat 2 41 0 598 226 62 40 chr2 51571485 51571662 -199116192 + LTR52 LTR ERVL 202 382 -39 305 244 79 59 chr2 51571725 51571979 -199115875 + L1ME LINE L1 2775 3033 -3113 299 304 122 13 chr2 51572445 51572682 -199115172 + L1ME LINE L1 3509 3771 -2375 303 314 87 4 chr2 51572835 51573064 -199114790 + L1ME LINE L1 5557 5804 -358 1518 158 9 76 chr2 51573195 51573511 -199114343 + AluJo SINE Alu 2 296 -16 205 310 0 70 chr2 51574221 51574292 -199113562 - L2 LINE L2 0 3272 3207 253 343 19 0 chr2 51574725 51574833 -199113021 + L1ME LINE L1 352 461 -5935 186 328 104 0 chr2 51575131 51575198 -199112656 - L2 LINE L2 -5 3267 3194 1307 249 122 77 chr2 51575730 51575890 -199111964 + L1ME LINE L1 786 937 -5469 1314 222 54 4 chr2 51575890 51576169 -199111685 - AluJo SINE Alu -17 295 3 1307 249 122 77 chr2 51576169 51576518 -199111336 + L1ME LINE L1 937 1269 -5137 2269 123 11 6 chr2 51576518 51576876 -199110978 + L1PB3 LINE L1 5793 6152 -2 1307 249 122 77 chr2 51576876 51577286 -199110568 + L1ME LINE L1 1269 1687 -4719 3093 264 65 17 chr2 51577846 51579055 -199108799 - L1M4 LINE L1 -807 5339 4074 1129 278 128 26 chr2 51579181 51580055 -199107799 + L1ME LINE L1 2490 3452 -2954 534 329 55 44 chr2 51580056 51580530 -199107324 - L2 LINE L2 -2059 1255 710 1382 58 16 0 chr2 51580578 51580767 -199107087 + L1PA5 LINE L1 5962 6153 -1 5480 298 109 29 chr2 51581210 51582719 -199105135 - L2 LINE L2 -4 3309 1922 1892 100 0 20 chr2 51582719 51583018 -199104836 + L1PA16 LINE L1 5874 6166 0 5480 298 109 29 chr2 51583018 51583482 -199104372 - L2 LINE L2 -1391 1922 1497 1471 200 12 44 chr2 51583482 51583802 -199104052 + AluJo SINE Alu 1 310 -2 5480 298 109 29 chr2 51583802 51584819 -199103035 - L2 LINE L2 -1816 1497 76 21 0 0 0 chr2 51585020 51585041 -199102813 + AT_rich Low_complexity Low_complexity 1 21 0 1341 207 46 0 chr2 51585987 51586248 -199101606 + AluJb SINE Alu 1 273 -39 785 170 18 13 chr2 51586249 51586474 -199101380 + GA-rich Low_complexity Low_complexity 1 226 0 448 307 94 23 chr2 51586633 51586942 -199100912 - L1ME3A LINE L1 -303 5867 5537 3197 141 58 29 chr2 51587593 51587821 -199100033 + L1PA16 LINE L1 5522 5742 -424 2133 110 3 7 chr2 51587821 51588121 -199099733 + AluSx SINE Alu 1 299 -13 3197 141 58 29 chr2 51588121 51588510 -199099344 + L1PA16 LINE L1 5742 6157 -9 333 68 0 0 chr2 51589040 51589084 -199098770 + (TA)n Simple_repeat Simple_repeat 1 44 0 423 68 0 0 chr2 51589084 51589143 -199098711 + (GA)n Simple_repeat Simple_repeat 1 59 0 22 0 0 0 chr2 51589393 51589415 -199098439 + AT_rich Low_complexity Low_complexity 1 22 0 548 289 133 70 chr2 51589503 51590028 -199097826 + L1MEd LINE L1 608 1165 -4954 2248 78 0 10 chr2 51590057 51590350 -199097504 + AluSp SINE Alu 1 290 -23 2410 77 10 0 chr2 51590350 51590660 -199097194 + AluSp SINE Alu 1 313 0 1148 122 33 11 chr2 51591070 51591250 -199096604 + AluSg/x SINE Alu 119 302 -8 360 302 143 11 chr2 51591407 51591589 -199096265 - MIR SINE MIR -51 211 6 21 0 0 0 chr2 51591611 51591632 -199096222 + AT_rich Low_complexity Low_complexity 1 21 0 415 260 87 46 chr2 51592110 51592306 -199095548 - L2 LINE L2 0 3313 3110 231 239 0 0 chr2 51593512 51593600 -199094254 + C-rich Low_complexity Low_complexity 1 88 0 202 315 174 0 chr2 51594222 51594314 -199093540 + L2 LINE L2 3163 3270 -2 1648 169 49 55 chr2 51595459 51595826 -199092028 + MLT1A1 LTR MaLR 1 365 0 576 318 47 8 chr2 51597232 51597482 -199090372 - MIR SINE MIR -2 260 6 198 322 67 56 chr2 51598745 51598835 -199089019 - MIR SINE MIR -82 126 36 1872 110 3 45 chr2 51601215 51601506 -199086348 - AluSc SINE Alu -30 279 1 23 33 0 0 chr2 51601991 51602021 -199085833 + AT_rich Low_complexity Low_complexity 1 30 0 226 234 85 21 chr2 51602072 51602166 -199085688 - LTR33 LTR ERVL -81 440 341 804 126 30 0 chr2 51602651 51602786 -199085068 + MLT1A2 LTR MaLR 1 139 -235 5517 194 101 41 chr2 51602786 51603621 -199084233 - MER52A LTR ERV1 0 1755 972 1934 147 7 3 chr2 51603621 51603914 -199083940 - AluSx SINE Alu -12 300 7 5517 194 101 41 chr2 51603914 51604662 -199083192 - MER52A LTR ERV1 -783 972 1 580 270 84 9 chr2 51604662 51604882 -199082972 + MLT1A2 LTR MaLR 134 370 -4 298 361 65 12 chr2 51605658 51605827 -199082027 + MER5A DNA MER1_type 1 178 -11 * 637 298 26 104 chr2 51605809 51606195 -199081659 + L2 LINE L2 2958 3313 0 1526 136 0 5 chr2 51607350 51607570 -199080284 - AluSq SINE Alu -94 219 1 2060 179 43 14 chr2 51607571 51607985 -199079869 - MSTA LTR MaLR -2 426 1 21 36 0 0 chr2 51608105 51608133 -199079721 + AT_rich Low_complexity Low_complexity 1 28 0 564 69 0 0 chr2 51658519 51658591 -199029263 - L1P LINE L1 -1995 4151 4080 245 143 0 0 chr2 51658591 51658633 -199029221 + LTR10C LTR ERV1 550 591 0 1358 116 23 0 chr2 51658788 51659003 -199028851 - L1PA14 LINE L1 -4 6157 5938 267 326 104 0 chr2 51659019 51659154 -199028700 - MIR SINE MIR -65 197 49 1622 230 38 5 chr2 51659205 51659575 -199028279 - MLT1E2 LTR MaLR 0 626 245 1315 127 79 9 chr2 51659796 51660025 -199027829 - L1PB4 LINE L1 -7 6149 5905 1328 191 11 80 chr2 51660347 51660709 -199027145 - MLT1A2 LTR MaLR 0 374 38 841 154 24 0 chr2 51662130 51662253 -199025601 + FLAM_C SINE Alu 1 126 -17 310 258 17 17 chr2 51662275 51662395 -199025459 + MER112 DNA MER1_type 38 157 -103 295 392 0 0 chr2 51662919 51663021 -199024833 - MIR SINE MIR -59 149 48 724 344 80 36 chr2 51663188 51663930 -199023924 - L2 LINE L2 -1325 1989 1216 6509 114 22 39 chr2 51664929 51666047 -199021807 + Tigger1 DNA MER2_type 308 1406 -1012 225 226 0 0 chr2 51667465 51667518 -199020336 + (TA)n Simple_repeat Simple_repeat 2 54 0 338 281 23 74 chr2 51667518 51667735 -199020119 + Charlie2 DNA MER1_type 113 318 -2464 500 198 6 110 chr2 51667739 51667921 -199019933 + Charlie2 DNA MER1_type 1865 2027 -835 1874 232 16 23 chr2 51667925 51668365 -199019489 + MER76 LTR ERV 1 437 -251 3142 161 17 43 chr2 51668817 51669030 -199018824 - Tigger1 DNA MER2_type -7 2411 2194 1907 166 3 13 chr2 51669030 51669343 -199018511 + AluSx SINE Alu 2 311 -1 3142 161 17 43 chr2 51669343 51669782 -199018072 - Tigger1 DNA MER2_type -224 2194 1776 568 122 11 0 chr2 51670220 51670310 -199017544 + FLAM_A SINE Alu 47 137 -5 224 300 0 0 chr2 51670450 51670500 -199017354 + MIR SINE MIR 95 144 -64 218 239 0 0 chr2 51670894 51670940 -199016914 + MIR SINE MIR 43 88 -120 979 97 7 0 chr2 51672262 51672407 -199015447 - L1PB2 LINE L1 0 6151 6006 379 327 102 15 chr2 51672508 51672774 -199015080 - L1ME4a LINE L1 -124 5997 5709 414 299 82 47 chr2 51672780 51673297 -199014557 + L2 LINE L2 2766 3308 -5 180 257 108 40 chr2 51673808 51673882 -199013972 + MIR SINE MIR 184 262 0 319 324 28 16 chr2 51674004 51674186 -199013668 - L1M4 LINE L1 -2194 3952 3769 336 224 60 0 chr2 51674197 51674313 -199013541 + L1ME4a LINE L1 5993 6115 -6 1486 154 124 0 chr2 51674680 51674939 -199012915 + AluJb SINE Alu 1 291 -21 699 294 73 75 chr2 51675137 51675831 -199012023 - L1MCc LINE L1 -5004 1419 727 1705 159 9 6 chr2 51676453 51676774 -199011080 - L1MC1 LINE L1 -377 5956 5635 2149 125 23 47 chr2 51676776 51677160 -199010694 + THE1C LTR MaLR 1 375 0 6832 103 8 62 chr2 51677160 51678332 -199009522 + THE1C-int LTR MaLR 1 1108 -472 22 0 0 0 chr2 51680118 51680140 -199007714 + AT_rich Low_complexity Low_complexity 1 22 0 1116 208 13 32 chr2 51681270 51681578 -199006276 - L1 LINE L1 -774 5372 5071 315 0 0 0 chr2 51681718 51681753 -199006101 + (TG)n Simple_repeat Simple_repeat 2 36 0 307 274 27 0 chr2 51681851 51681924 -199005930 - MIR SINE MIR -65 143 69 2443 88 17 11 chr2 51682042 51682394 -199005460 + THE1B LTR MaLR 1 354 -10 5270 149 65 2 chr2 51682399 51683320 -199004534 + THE1B-int LTR MaLR 1 979 -601 647 74 0 11 chr2 51683919 51684014 -199003840 + (TA)n Simple_repeat Simple_repeat 2 95 0 1459 174 103 4 chr2 51684697 51684978 -199002876 - MER1B DNA MER1_type 0 339 31 267 295 170 67 chr2 51685253 51685477 -199002377 + MIR SINE MIR 6 252 -10 242 287 17 44 chr2 51686563 51686744 -199001110 + CT-rich Low_complexity Low_complexity 2 177 0 220 232 36 0 chr2 51687375 51687431 -199000423 + (CTA)n Simple_repeat Simple_repeat 1 58 0 27 0 0 0 chr2 51687992 51688019 -198999835 + AT_rich Low_complexity Low_complexity 1 27 0 501 118 0 13 chr2 51688019 51688095 -198999759 - tRNA-Glu-GAG tRNA tRNA 0 75 1 2764 30 0 3 chr2 51688101 51688463 -198999391 + L1P LINE L1 5009 5369 -777 182 37 37 0 chr2 51688583 51688610 -198999244 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 1208 263 31 31 chr2 51688739 51689154 -198998700 + LTR52 LTR ERVL 4 418 -3 316 228 188 10 chr2 51689232 51689333 -198998521 + L1 LINE L1 3289 3407 -2739 756 148 8 105 chr2 51689730 51689911 -198997943 - MSTB2 LTR MaLR 0 457 234 1915 165 10 0 chr2 51689911 51690208 -198997646 + AluSx SINE Alu 1 300 -12 756 148 8 105 chr2 51690208 51690228 -198997626 - MSTB2 LTR MaLR -223 234 212 437 145 12 24 chr2 51690228 51690311 -198997543 - LTR1 LTR ERV1 0 785 704 667 194 0 16 chr2 51692305 51692486 -198995368 - FLAM_A SINE Alu 0 180 2 1519 169 8 8 chr2 51693335 51693595 -198994259 - MER4E LTR ERV1 0 779 520 250 315 36 18 chr2 51694014 51694125 -198993729 + MIR SINE MIR 47 159 -103 308 328 8 8 chr2 51694219 51694347 -198993507 + MER94 DNA DNA 2 129 -5 493 359 28 42 chr2 51695036 51695323 -198992531 + LTR16C LTR ERVL 149 431 -60 1230 178 121 50 chr2 51695683 51695982 -198991872 + MSTB1 LTR MaLR 1 283 -149 1153 239 19 69 chr2 51696834 51697211 -198990643 - MLT1E1 LTR MaLR 0 654 297 337 211 14 14 chr2 51697235 51697306 -198990548 - MLT1E1 LTR MaLR -541 113 43 3258 167 41 23 chr2 51697839 51699058 -198988796 + L1PA7 LINE L1 4041 5854 -300 3258 81 0 5 chr2 51699058 51699502 -198988352 + L1PA7 LINE L1 5710 6151 -3 3258 167 41 23 chr2 51699502 51699806 -198988048 + L1PA7 LINE L1 5854 6151 -3 195 184 0 0 chr2 51699948 51699986 -198987868 + A-rich Low_complexity Low_complexity 1 38 0 2127 104 17 3 chr2 51700615 51700913 -198986941 - AluSp SINE Alu -11 302 1 654 257 38 24 chr2 51700913 51701123 -198986731 - L1MDa LINE L1 -6308 232 20 297 296 108 52 chr2 51701459 51701672 -198986182 - MLT1L LTR MaLR -85 530 306 2221 117 3 0 chr2 51702662 51702961 -198984893 - AluSg SINE Alu -7 303 4 22 0 0 0 chr2 51702982 51703004 -198984850 + AT_rich Low_complexity Low_complexity 1 22 0 1599 162 12 8 chr2 51703618 51703877 -198983977 + AluJo SINE Alu 1 260 -52 2652 340 47 23 chr2 51704079 51705705 -198982149 + ERVL LTR ERVL 1881 3559 -1977 540 332 68 77 chr2 51705814 51706567 -198981287 - L2 LINE L2 -420 2894 2149 444 260 102 0 chr2 51707586 51707713 -198980141 + L1MC/D LINE L1 5443 5582 -2226 265 327 69 0 chr2 51707944 51708045 -198979809 + MIR SINE MIR 40 147 -115 570 104 19 19 chr2 51709065 51709171 -198978683 + (TTTC)n Simple_repeat Simple_repeat 1 106 0 201 111 0 0 chr2 51709171 51709198 -198978656 + (TCCC)n Simple_repeat Simple_repeat 1 27 0 603 197 77 0 chr2 51709198 51709315 -198978539 - FLAM_A SINE Alu -6 127 2 197 302 32 0 chr2 51709417 51709480 -198978374 + MER5A DNA MER1_type 26 90 -99 1083 178 14 10 chr2 51710151 51710359 -198977495 - MER3 DNA MER1_type 0 209 1 27 0 0 0 chr2 51710934 51710961 -198976893 + AT_rich Low_complexity Low_complexity 1 27 0 1583 80 58 0 chr2 51711355 51711581 -198976273 + L1PA8 LINE L1 5926 6164 -8 2947 6 0 0 chr2 51711927 51712245 -198975609 - AluYb8 SINE Alu 0 318 1 307 308 75 54 chr2 51712879 51713214 -198974640 - L1ME LINE L1 -461 5709 5368 343 231 92 17 chr2 51713301 51713449 -198974405 - L1ME LINE L1 -3111 3035 2871 243 0 0 0 chr2 51713449 51713476 -198974378 + (TG)n Simple_repeat Simple_repeat 1 27 0 343 231 92 17 chr2 51713476 51713500 -198974354 - L1ME LINE L1 -3275 2871 2850 306 286 102 0 chr2 51713610 51713708 -198974146 + MIR SINE MIR 49 156 -106 14835 135 20 9 chr2 51713710 51715396 -198972458 - Tigger1 DNA MER2_type -1 2417 697 881 69 77 15 chr2 51715396 51715526 -198972328 + MER85 DNA T2_type 1 138 -1 14835 135 20 9 chr2 51715526 51716205 -198971649 - Tigger1 DNA MER2_type -1721 697 27 214 298 39 29 chr2 51716215 51716319 -198971535 + MIR SINE MIR 155 259 -3 331 276 74 37 chr2 51716358 51716521 -198971333 - L1MEc LINE L1 -938 5277 5109 27 49 0 0 chr2 51716521 51716562 -198971292 + AT_rich Low_complexity Low_complexity 1 41 0 198 290 30 77 chr2 51716588 51716757 -198971097 - L2 LINE L2 -203 3069 2909 450 264 60 53 chr2 51716763 51717047 -198970807 - L1M4 LINE L1 -1091 5055 4770 21 95 0 0 chr2 51717193 51717256 -198970598 + AT_rich Low_complexity Low_complexity 1 63 0 498 310 113 63 chr2 51717473 51717688 -198970166 - L1M4 LINE L1 -1751 4395 4192 2185 101 0 7 chr2 51717688 51718001 -198969853 - AluSq SINE Alu 0 311 1 498 310 113 63 chr2 51718001 51718423 -198969431 - L1M4 LINE L1 -1954 4192 3725 272 268 52 55 chr2 51718436 51718765 -198969089 - L1M4 LINE L1 -2754 3392 3065 481 252 82 36 chr2 51718896 51719611 -198968243 - L1MEc LINE L1 -1601 4614 3934 1983 128 26 7 chr2 51719611 51719915 -198967939 - AluSx SINE Alu 0 312 3 481 252 82 36 chr2 51719915 51720336 -198967518 - L1MEc LINE L1 -2281 3934 3534 2226 189 44 40 chr2 51720336 51720839 -198967015 + MLT1D LTR MaLR 1 505 0 481 252 82 36 chr2 51720839 51720908 -198966946 - L1MEc LINE L1 -2681 3534 3470 1893 116 40 11 chr2 51720908 51721184 -198966670 + AluSq SINE Alu 16 299 -14 481 252 82 36 chr2 51721184 51721522 -198966332 - L1MEc LINE L1 -2745 3470 2816 917 134 21 14 chr2 51721522 51721664 -198966190 - LTR8 LTR ERV1 0 691 549 7196 22 0 0 chr2 51721722 51722551 -198965303 - L1PA3 LINE L1 -3 6152 5324 7289 27 0 22 chr2 51722552 51723463 -198964391 + L1PA3 LINE L1 4405 5295 -851 659 195 36 56 chr2 51723466 51723661 -198964193 - LTR8 LTR ERV1 -163 528 338 4957 127 5 3 chr2 51723661 51724408 -198963446 + HUERS-P1 LTR ERV1 5515 6263 0 3121 109 36 86 chr2 51724408 51724633 -198963221 + LTR8 LTR ERV1 1 236 -455 2310 90 3 0 chr2 51724633 51724932 -198962922 + AluSp SINE Alu 1 300 -13 3121 109 36 86 chr2 51724932 51725266 -198962588 + LTR8 LTR ERV1 236 532 -159 395 225 0 0 chr2 51726107 51726178 -198961676 + LTR8 LTR ERV1 521 591 -100 923 185 9 30 chr2 51726202 51726432 -198961422 - LTR8 LTR ERV1 -346 381 141 872 182 19 7 chr2 51726468 51726642 -198961212 - LTR8A LTR ERV1 -386 160 1 910 224 24 127 chr2 51726649 51726772 -198961082 - L1MEc LINE L1 -3400 2815 2681 2365 213 35 66 chr2 51726772 51727485 -198960369 + LTR8 LTR ERV1 1 691 0 910 224 24 127 chr2 51727485 51728071 -198959783 - L1MEc LINE L1 -3534 2681 2179 1412 181 30 37 chr2 51728139 51728438 -198959416 + MER2 DNA MER2_type 49 345 0 31890 109 11 57 chr2 51728558 51735008 -198952846 + L1PA7 LINE L1 12 6152 -2 1171 263 44 34 chr2 51735016 51735515 -198952339 - L1MEc LINE L1 -4438 1958 1455 320 311 33 0 chr2 51735648 51735770 -198952084 - L1MEc LINE L1 -4928 1468 1343 1454 284 106 36 chr2 51735825 51736838 -198951016 - L1MEc LINE L1 -5130 1266 184 6454 219 35 24 chr2 51736852 51738028 -198949826 - L1MC1 LINE L1 -1 6315 5154 463 96 60 0 chr2 51738028 51738111 -198949743 - L1PA13 LINE L1 -6 6157 6070 6454 219 35 24 chr2 51738111 51739942 -198947912 - L1MC1 LINE L1 -1162 5154 3278 251 259 37 74 chr2 51740300 51740435 -198947419 - L1MC1 LINE L1 -4869 1250 1121 1108 236 130 32 chr2 51740453 51740885 -198946969 - Charlie4a DNA MER1_type -15 493 20 340 237 139 12 chr2 51740961 51741134 -198946720 - L1MC1 LINE L1 -5030 1089 895 1984 147 3 0 chr2 51741508 51741800 -198946054 - AluSx SINE Alu -19 293 1 1021 172 120 0 chr2 51741946 51742179 -198945675 - L1MA8 LINE L1 -2 6289 6029 259 310 44 70 chr2 51742212 51742554 -198945300 - L1MC1 LINE L1 -5777 342 10 1743 220 145 2 chr2 51744267 51744722 -198943132 - MLT2B1 LTR ERVL 0 520 1 331 336 125 20 chr2 51745183 51745478 -198942376 + L1ME4a LINE L1 5525 5850 -271 1719 156 38 41 chr2 51745480 51745845 -198942009 - THE1B LTR MaLR 0 364 1 302 328 69 9 chr2 51747060 51747176 -198940678 + L2 LINE L2 3150 3272 0 200 86 29 0 chr2 51747499 51747534 -198940320 + (GA)n Simple_repeat Simple_repeat 1 36 0 225 0 0 0 chr2 51748450 51748475 -198939379 + (CA)n Simple_repeat Simple_repeat 2 26 0 1404 189 129 0 chr2 51748949 51749251 -198938603 + L1PA16 LINE L1 5818 6158 -8 233 135 0 77 chr2 51749646 51749698 -198938156 + MER5B DNA MER1_type 8 55 -123 284 282 120 56 chr2 51749707 51749849 -198938005 + MER5B DNA MER1_type 21 171 -7 278 331 13 33 chr2 51750025 51750176 -198937678 + L2 LINE L2 2435 2582 -732 262 385 0 41 chr2 51750221 51750343 -198937511 + L2 LINE L2 2762 2878 -436 1397 283 130 50 chr2 51750695 51752283 -198935571 - L1ME LINE L1 -523 5647 3848 1664 158 35 18 chr2 51752283 51752567 -198935287 + AluJb SINE Alu 2 290 -22 1397 283 130 50 chr2 51752567 51753059 -198934795 - L1ME LINE L1 -2322 3848 3397 1610 181 0 17 chr2 51753200 51753499 -198934355 + AluJb SINE Alu 7 300 -12 306 274 221 9 chr2 51755242 51755355 -198932499 + L2 LINE L2 3136 3272 0 22 56 0 0 chr2 51755408 51755444 -198932410 + AT_rich Low_complexity Low_complexity 1 36 0 2107 193 56 5 chr2 51756653 51757083 -198930771 - Tigger2 DNA MER2_type 0 2718 2267 452 145 0 0 chr2 51757067 51757136 -198930718 - Tigger2 DNA MER2_type -2649 69 1 * 184 283 0 19 chr2 51757666 51757719 -198930135 - L2 LINE L2 0 3313 3262 422 341 102 6 chr2 51757865 51758041 -198929813 + MIR3 SINE MIR 10 202 -6 345 296 0 40 chr2 51758122 51758247 -198929607 + MIR SINE MIR 99 218 -44 1704 162 99 0 chr2 51758649 51758963 -198928891 + MER7A DNA MER2_type 3 345 -1 225 0 0 0 chr2 51758964 51758989 -198928865 + (TG)n Simple_repeat Simple_repeat 2 26 0 733 318 57 57 chr2 51761074 51761499 -198926355 + LTR16C LTR ERVL 1 425 -66 289 301 261 6 chr2 51761937 51762113 -198925741 + L3 LINE CR1 273 493 -1084 812 231 24 33 chr2 51762180 51762392 -198925462 - MER20 DNA MER1_type -9 210 1 1023 335 175 10 chr2 51762478 51763165 -198924689 + L3 LINE CR1 715 1514 -63 284 324 108 0 chr2 51763324 51763472 -198924382 - MIR SINE MIR -50 212 49 1261 126 0 0 chr2 51764072 51764247 -198923607 - AluSg/x SINE Alu -15 295 121 403 206 41 12 chr2 51764438 51764608 -198923246 + (TA)n Simple_repeat Simple_repeat 2 176 0 423 0 0 0 chr2 51767357 51767404 -198920450 + (TG)n Simple_repeat Simple_repeat 1 47 0 2028 117 37 7 chr2 51771669 51771969 -198915885 + AluSc SINE Alu 1 309 0 347 333 76 85 chr2 51776406 51776841 -198911013 - L2 LINE L2 -2 3270 2840 27 0 0 0 chr2 51777191 51777218 -198910636 + AT_rich Low_complexity Low_complexity 1 27 0 1168 195 81 16 chr2 51777536 51777782 -198910072 + AluJo SINE Alu 12 273 -39 220 189 0 0 chr2 51778710 51778747 -198909107 + (TG)n Simple_repeat Simple_repeat 1 37 0 1439 184 4 19 chr2 51778794 51779065 -198908789 + AluJo SINE Alu 2 268 -44 249 81 47 81 chr2 51779102 51779188 -198908666 + CT-rich Low_complexity Low_complexity 1 83 0 414 284 131 38 chr2 51779427 51779610 -198908244 - MIR SINE MIR -26 236 37 2383 84 0 0 chr2 51779735 51780043 -198907811 - AluY SINE Alu -1 310 3 554 296 47 24 chr2 51781743 51781956 -198905898 - MIR SINE MIR 0 262 45 360 264 162 56 chr2 51783087 51783303 -198904551 - MIR SINE MIR -13 249 11 225 0 0 0 chr2 51783477 51783502 -198904352 + (CA)n Simple_repeat Simple_repeat 2 26 0 1079 200 71 77 chr2 51783597 51784075 -198903779 + MER67C LTR ERV1 27 511 -3 228 314 190 15 chr2 51784896 51785033 -198902821 + MIR SINE MIR 102 262 0 201 271 200 0 chr2 51786464 51786534 -198901320 + L2 LINE L2 3208 3291 -22 237 216 68 88 chr2 51787762 51787910 -198899944 - L2 LINE L2 -72 3241 3097 198 257 14 54 chr2 51788124 51788198 -198899656 + L3b LINE CR1 1156 1226 -357 1842 166 0 0 chr2 51789249 51789568 -198898286 - AluSx SINE Alu 0 320 2 273 245 22 50 chr2 51791929 51792068 -198895786 - L1M4 LINE L1 -2764 3382 3248 * 7048 65 8 2 chr2 51792051 51793349 -198894505 - L1PA7 LINE L1 0 6154 4847 1452 96 0 0 chr2 51793348 51793557 -198894297 + L1PA7 LINE L1 4616 4824 -1322 * 750 162 0 74 chr2 51794117 51794315 -198893539 - FLAM_C SINE Alu 0 193 7 387 234 21 11 chr2 51794316 51794410 -198893444 + MER20 DNA MER1_type 125 219 0 235 254 193 26 chr2 51794433 51794547 -198893307 + MIR SINE MIR 116 248 -14 26 50 0 0 chr2 51797975 51798015 -198889839 + AT_rich Low_complexity Low_complexity 1 40 0 431 270 127 0 chr2 51798670 51798796 -198889058 - MIR3 SINE MIR -35 173 32 207 161 0 0 chr2 51798827 51798858 -198888996 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 237 192 19 0 chr2 51800304 51800356 -198887498 + (TA)n Simple_repeat Simple_repeat 1 53 0 24 24 0 24 chr2 51800449 51800466 -198887388 + AT_rich Low_complexity Low_complexity 1 17 -24 1549 107 0 0 chr2 51800466 51800690 -198887164 + L1PA8 LINE L1 5943 6166 -6 24 24 0 24 chr2 51800690 51800714 -198887140 + AT_rich Low_complexity Low_complexity 17 41 0 234 150 0 0 chr2 51801222 51801262 -198886592 + (GA)n Simple_repeat Simple_repeat 1 40 0 216 279 115 0 chr2 51802739 51802800 -198885054 + L2 LINE L2 3232 3299 -14 592 335 38 30 chr2 51803787 51804023 -198883831 + MIR SINE MIR 20 257 -5 484 330 101 9 chr2 51806213 51806431 -198881423 + MIR SINE MIR 24 261 -1 32 43 0 0 chr2 51807675 51807721 -198880133 + AT_rich Low_complexity Low_complexity 1 46 0 261 83 0 0 chr2 51807972 51808008 -198879846 + (CA)n Simple_repeat Simple_repeat 1 36 0 542 185 118 17 chr2 51808619 51808738 -198879116 + FLAM_A SINE Alu 1 131 -2 185 225 25 0 chr2 51809217 51809257 -198878597 + MIR3 SINE MIR 127 167 -41 446 232 0 0 chr2 51809279 51809374 -198878480 + L1MD2 LINE L1 6033 6127 -232 1216 186 8 8 chr2 51809374 51809643 -198878211 + AluSc SINE Alu 43 311 0 1797 98 8 4 chr2 51810967 51811212 -198876642 + AluSx SINE Alu 10 255 -57 2205 112 0 3 chr2 51811217 51811513 -198876341 + AluSx SINE Alu 1 295 -17 1671 171 24 3 chr2 51811544 51811836 -198876018 - AluSx SINE Alu -12 300 3 2092 101 0 3 chr2 51811939 51812226 -198875628 - AluSx SINE Alu -26 286 1 188 258 0 48 chr2 51813431 51813493 -198874361 - L2 LINE L2 -1020 2294 2236 449 261 63 0 chr2 51813836 51813978 -198873876 + L1MD3 LINE L1 7840 7990 -5 659 122 0 0 chr2 51816325 51816415 -198871439 - 5S rRNA rRNA -31 90 1 261 163 0 0 chr2 51820255 51820304 -198867550 + (CA)n Simple_repeat Simple_repeat 2 50 0 197 146 21 0 chr2 51821741 51821789 -198866065 + (TA)n Simple_repeat Simple_repeat 2 50 0 526 257 56 6 chr2 51822409 51822588 -198865266 + L1MC4a LINE L1 5694 5881 -1927 2085 117 0 38 chr2 51822676 51822993 -198864861 - AluSx SINE Alu -7 305 1 193 225 100 0 chr2 51823526 51823566 -198864288 + MIR SINE MIR 93 136 -72 1023 165 55 50 chr2 51823906 51824124 -198863730 + MER20 DNA MER1_type 1 219 0 593 249 99 10 chr2 51824214 51824415 -198863439 - L2 LINE L2 -1147 2167 1949 1989 115 10 0 chr2 51824546 51824834 -198863020 + AluSc SINE Alu 4 294 -15 228 345 46 0 chr2 51825460 51825547 -198862307 - MIR3 SINE MIR -21 187 97 2063 122 20 0 chr2 51825675 51825970 -198861884 + AluSg SINE Alu 1 301 -9 226 341 24 0 chr2 51826710 51826795 -198861059 - MIR SINE MIR -109 153 67 327 288 36 43 chr2 51826848 51826987 -198860867 - MER5A DNA MER1_type -1 188 51 217 301 27 0 chr2 51828013 51828086 -198859768 + GA-rich Low_complexity Low_complexity 2 76 0 296 320 66 33 chr2 51828524 51828705 -198859149 - MER5A DNA MER1_type 0 189 3 558 323 30 102 chr2 51829591 51829991 -198857863 + L2 LINE L2 2900 3270 -2 34 24 0 0 chr2 51830122 51830163 -198857691 + AT_rich Low_complexity Low_complexity 1 41 0 21 57 0 0 chr2 51830432 51830467 -198857387 + AT_rich Low_complexity Low_complexity 1 35 0 1470 203 30 20 chr2 51830550 51830845 -198857009 + AluJb SINE Alu 3 300 -12 309 26 0 0 chr2 51831369 51831407 -198856447 + (CA)n Simple_repeat Simple_repeat 2 39 0 406 335 106 18 chr2 51831658 51831885 -198855969 + MIR SINE MIR 3 249 -13 1532 186 108 31 chr2 51832863 51833258 -198854596 - Charlie1b DNA MER1_type -2238 523 89 2120 127 28 35 chr2 51833258 51833440 -198854414 - L1MA5 LINE L1 -5 6295 6113 1576 170 72 4 chr2 51833440 51833717 -198854137 + AluJb SINE Alu 1 296 -16 2120 127 28 35 chr2 51833717 51833928 -198853926 - L1MA5 LINE L1 -187 6113 5905 1532 186 108 31 chr2 51833928 51833977 -198853877 - Charlie1b DNA MER1_type -2672 89 45 21 0 0 0 chr2 51834072 51834093 -198853761 + AT_rich Low_complexity Low_complexity 1 21 0 186 194 183 86 chr2 51834679 51834772 -198853082 - L3 LINE CR1 -674 903 802 180 0 0 0 chr2 51835278 51835298 -198852556 + (A)n Simple_repeat Simple_repeat 1 20 0 690 322 133 39 chr2 51835973 51836123 -198851731 - L2 LINE L2 -6 3307 3172 1841 291 25 23 chr2 51836123 51836732 -198851122 - MER90 LTR ERV1 -1 613 4 690 322 133 39 chr2 51836732 51837361 -198850493 - L2 LINE L2 -141 3172 2452 5992 190 42 25 chr2 51837717 51838918 -198848936 + L1MC1 LINE L1 3961 5207 -1126 1613 105 52 133 chr2 51838918 51839242 -198848612 + AluSc SINE Alu 3 300 -9 5992 190 42 25 chr2 51839242 51840371 -198847483 + L1MC1 LINE L1 5207 6315 -18 2506 50 0 0 chr2 51842158 51842461 -198845393 + AluY SINE Alu 1 303 -8 240 35 0 0 chr2 51842520 51842549 -198845305 + (A)n Simple_repeat Simple_repeat 1 29 0 219 261 38 140 chr2 51842625 51842782 -198845072 - L2 LINE L2 0 3272 3132 1789 202 148 14 chr2 51843091 51843534 -198844320 + MLT1D LTR MaLR 1 624 0 27 0 0 0 chr2 51843642 51843669 -198844185 + AT_rich Low_complexity Low_complexity 1 27 0 410 290 168 7 chr2 51845659 51845814 -198842040 - MER5A DNA MER1_type 0 189 10 21 36 0 0 chr2 51846050 51846078 -198841776 + AT_rich Low_complexity Low_complexity 1 28 0 268 288 131 39 chr2 51847814 51847967 -198839887 + MIR SINE MIR 92 258 -4 632 293 77 5 chr2 51848152 51848360 -198839494 + MIR SINE MIR 10 232 -30 1420 222 87 30 chr2 51848435 51848920 -198838934 + MLT1E1 LTR MaLR 31 654 0 218 338 15 0 chr2 51849375 51849443 -198838411 + MIR SINE MIR 22 90 -118 204 342 13 0 chr2 51849887 51849963 -198837891 - MIR SINE MIR -73 135 59 27 0 0 0 chr2 51850321 51850348 -198837506 + AT_rich Low_complexity Low_complexity 1 27 0 197 83 28 0 chr2 51852262 51852298 -198835556 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 259 379 82 16 chr2 51852795 51853183 -198834671 + L2 LINE L2 2468 2881 -433 354 358 126 5 chr2 51853520 51853710 -198834144 + L3 LINE CR1 1365 1577 0 1632 200 0 11 chr2 51853719 51854004 -198833850 + AluJo SINE Alu 1 282 -30 4401 51 0 7 chr2 51854045 51854592 -198833262 - L1PA7 LINE L1 -155 5999 5457 577 85 37 0 chr2 51855127 51855209 -198832645 - AluY SINE Alu -14 297 213 28 0 0 0 chr2 51858246 51858274 -198829580 + AT_rich Low_complexity Low_complexity 1 28 0 219 405 15 0 chr2 51858459 51858590 -198829264 - MIR3 SINE MIR -4 204 72 212 385 39 0 chr2 51859328 51859458 -198828396 - L2 LINE L2 0 3313 3179 239 0 32 0 chr2 51860751 51860782 -198827072 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 405 327 46 91 chr2 51860954 51861034 -198826820 - MIR SINE MIR -1 261 179 1006 188 22 65 chr2 51861034 51861263 -198826591 - MER20 DNA MER1_type 0 219 1 405 327 46 91 chr2 51861263 51861445 -198826409 - MIR SINE MIR -83 179 11 243 0 0 0 chr2 51862175 51862202 -198825652 + (A)n Simple_repeat Simple_repeat 1 27 0 244 308 85 31 chr2 51862494 51862624 -198825230 + MIR SINE MIR 112 248 -14 24 0 0 0 chr2 51862740 51862764 -198825090 + AT_rich Low_complexity Low_complexity 1 24 0 1966 136 32 29 chr2 51863074 51863448 -198824406 - THE1C LTR MaLR 0 375 1 2332 90 0 0 chr2 51866021 51866320 -198821534 + AluSg1 SINE Alu 1 299 -10 2579 45 0 7 chr2 51866323 51866632 -198821222 + AluY SINE Alu 1 307 -4 2025 138 0 3 chr2 51868511 51868807 -198819047 - AluSc SINE Alu -14 295 1 1125 69 0 0 chr2 51868809 51868940 -198818914 - AluY SINE Alu -180 131 1 23 33 0 0 chr2 51869143 51869173 -198818681 + AT_rich Low_complexity Low_complexity 1 30 0 301 287 69 0 chr2 51870567 51870668 -198817186 - MIR SINE MIR -28 234 127 278 305 102 25 chr2 51871218 51871276 -198816578 + MIR3 SINE MIR 37 89 -119 1977 142 0 10 chr2 51871276 51871572 -198816282 - AluSg SINE Alu -15 295 3 278 305 102 25 chr2 51871572 51871631 -198816223 + MIR3 SINE MIR 89 163 -45 289 282 190 20 chr2 51872330 51872510 -198815344 - MIR SINE MIR -14 248 41 2292 102 0 13 chr2 51873527 51873840 -198814014 - AluSc SINE Alu 0 309 1 825 149 17 6 chr2 51873911 51874086 -198813768 + CT-rich Low_complexity Low_complexity 4 180 0 1554 164 45 0 chr2 51874113 51874381 -198813473 - AluJb SINE Alu -24 288 9 21 0 0 0 chr2 51874717 51874738 -198813116 + AT_rich Low_complexity Low_complexity 1 21 0 1831 173 25 33 chr2 51875641 51876005 -198811849 + MLT1A1 LTR MaLR 5 365 0 1222 198 75 78 chr2 51876018 51876402 -198811452 + MLT1B LTR MaLR 4 386 -4 194 316 38 60 chr2 51876444 51876577 -198811277 + MIR SINE MIR 63 192 -70 23 0 0 0 chr2 51876609 51876632 -198811222 + AT_rich Low_complexity Low_complexity 1 23 0 1236 194 75 124 chr2 51876787 51877319 -198810535 + MER67D LTR ERV1 5 510 -4 1121 261 29 34 chr2 51879232 51879581 -198808273 + MLT1A2 LTR MaLR 3 349 -25 212 86 29 0 chr2 51879585 51879620 -198808234 + (CA)n Simple_repeat Simple_repeat 2 37 0 235 206 16 16 chr2 51879626 51879689 -198808165 + (TA)n Simple_repeat Simple_repeat 1 63 0 411 200 0 82 chr2 51879690 51879825 -198808029 + L2 LINE L2 3146 3269 -44 3835 147 11 20 chr2 51879829 51880750 -198807104 + L1P4 LINE L1 4685 5596 -565 233 291 7 47 chr2 51882195 51882343 -198805511 - HAL1 LINE L1 -110 2397 2256 1223 254 65 43 chr2 51882533 51882977 -198804877 + L1ME1 LINE L1 5705 6158 -8 235 129 0 0 chr2 51883078 51883109 -198804745 + Alu SINE Alu 87 117 -185 351 313 157 20 chr2 51883113 51883362 -198804492 - HAL1 LINE L1 -550 1957 1675 1855 170 6 6 chr2 51884110 51884422 -198803432 + AluJo SINE Alu 1 312 0 293 286 103 24 chr2 51884523 51884649 -198803205 + MIR3 SINE MIR 43 178 -30 256 326 23 0 chr2 51885094 51885180 -198802674 + L2 LINE L2 2983 3070 -243 1625 183 0 3 chr2 51885200 51885485 -198802369 + AluJb SINE Alu 13 296 -16 836 59 0 0 chr2 51885491 51885593 -198802261 + AluY SINE Alu 1 102 -209 2608 95 0 3 chr2 51885693 51886062 -198801792 + L1PA13 LINE L1 5796 6163 0 1813 156 26 52 chr2 51887471 51887856 -198799998 + THE1C LTR MaLR 1 375 0 1093 270 119 10 chr2 51888064 51888460 -198799394 + MLT1H LTR MaLR 111 549 0 22 0 0 0 chr2 51888706 51888728 -198799126 + AT_rich Low_complexity Low_complexity 1 22 0 820 286 43 48 chr2 51889602 51890092 -198797762 + MLT1F1 LTR MaLR 1 563 -4 523 106 11 11 chr2 51890125 51890219 -198797635 + (TCCC)n Simple_repeat Simple_repeat 4 97 0 1927 142 3 0 chr2 51890296 51890608 -198797246 + AluSg SINE Alu 1 310 0 1943 118 0 0 chr2 51890610 51890865 -198796989 + AluSx SINE Alu 29 283 -29 35 71 0 0 chr2 51891713 51891783 -198796071 + AT_rich Low_complexity Low_complexity 1 70 0 352 264 83 55 chr2 51891838 51892092 -198795762 + HAL1 LINE L1 2245 2505 -2 1183 52 0 13 chr2 51892262 51892417 -198795437 - L1PA5 LINE L1 0 6154 6002 503 48 0 0 chr2 51892418 51892481 -198795373 + L1P LINE L1 3971 4033 -2113 699 169 15 0 chr2 51893058 51893188 -198794666 + MER97c DNA MER1_type? 46 177 -913 2326 105 62 0 chr2 51893610 51893963 -198793891 + THE1C LTR MaLR 1 375 0 289 343 76 9 chr2 51894019 51894124 -198793730 - L2 LINE L2 -2 3311 3200 243 319 0 0 chr2 51895441 51895510 -198792344 - MIR SINE MIR -19 243 175 270 0 0 0 chr2 51896555 51896585 -198791269 + (CAA)n Simple_repeat Simple_repeat 1 30 0 1228 103 6 17 chr2 51896748 51896923 -198790931 - AluSg/x SINE Alu -19 293 121 247 296 12 0 chr2 51897565 51897646 -198790208 - MER20B DNA MER1_type -587 196 115 314 191 374 48 chr2 51898031 51898178 -198789676 - MIR SINE MIR -66 196 2 277 271 71 0 chr2 51898612 51898682 -198789172 + MIR SINE MIR 80 154 -108 444 250 76 76 chr2 51899087 51899311 -198788543 + L2 LINE L2 3090 3313 0 32 0 0 0 chr2 51899833 51899865 -198787989 + AT_rich Low_complexity Low_complexity 1 32 0 415 256 40 0 chr2 51900529 51900654 -198787200 + MER94 DNA DNA 1 130 -4 504 301 32 27 chr2 51900722 51900908 -198786946 - MIR3 SINE MIR -2 206 20 28 71 0 0 chr2 51901339 51901395 -198786459 + AT_rich Low_complexity Low_complexity 1 56 0 443 232 45 27 chr2 51903139 51903251 -198784603 + L2 LINE L2 3188 3301 -12 313 315 0 0 chr2 51903872 51903964 -198783890 + L2 LINE L2 3221 3312 -1 22 0 0 0 chr2 51904133 51904155 -198783699 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 51907817 51907845 -198780009 + AT_rich Low_complexity Low_complexity 1 28 0 319 334 69 82 chr2 51908360 51909067 -198778787 + L2 LINE L2 2560 3266 -6 192 135 0 0 chr2 51909450 51909487 -198778367 + (CATA)n Simple_repeat Simple_repeat 4 40 0 2442 129 6 3 chr2 51910019 51910382 -198777472 + THE1B LTR MaLR 1 364 0 10463 112 23 30 chr2 51910382 51911966 -198775888 + THE1B-int LTR MaLR 1 1573 -7 2366 122 8 6 chr2 51911966 51912320 -198775534 + THE1B LTR MaLR 2 356 -8 1517 236 49 6 chr2 51913562 51913909 -198773945 + MLT1A1 LTR MaLR 4 365 0 372 22 0 0 chr2 51914942 51914987 -198772867 + (CA)n Simple_repeat Simple_repeat 2 46 0 400 339 0 0 chr2 51915170 51915288 -198772566 + L2 LINE L2 3191 3308 -5 23 68 0 0 chr2 51915609 51915653 -198772201 + AT_rich Low_complexity Low_complexity 1 44 0 228 85 0 169 chr2 51916040 51916099 -198771755 + U5 snRNA snRNA 1 49 -67 319 308 96 39 chr2 51916539 51916747 -198771107 - MIR SINE MIR -13 249 30 290 257 128 0 chr2 51916940 51917049 -198770805 - MIR SINE MIR -77 185 63 563 256 227 31 chr2 51919854 51920088 -198767766 + MIR SINE MIR 2 261 -1 2436 80 0 0 chr2 51921246 51921548 -198766306 - AluY SINE Alu -9 302 1 2678 20 0 0 chr2 51921887 51922188 -198765666 + AluYa5 SINE Alu 1 301 -10 215 347 40 0 chr2 51922629 51922704 -198765150 - L3b LINE CR1 -258 1325 1248 2079 158 10 47 chr2 51922704 51923109 -198764745 + MLT1B LTR MaLR 1 390 0 318 347 91 23 chr2 51924597 51924773 -198763081 + L2 LINE L2 3081 3268 -4 274 200 178 22 chr2 51925857 51925947 -198761907 + MIR SINE MIR 129 232 -30 272 263 81 30 chr2 51925980 51926079 -198761775 - L3 LINE CR1 -1 1576 1473 403 358 33 0 chr2 51927197 51927348 -198760506 - MER91A DNA MER1_type -40 156 1 790 272 45 29 chr2 51927781 51928027 -198759827 - MIR SINE MIR -6 256 7 261 257 86 79 chr2 51928436 51928588 -198759266 + MIR SINE MIR 94 246 -16 21 0 0 0 chr2 51929442 51929463 -198758391 + AT_rich Low_complexity Low_complexity 1 21 0 2224 236 96 48 chr2 51929738 51930662 -198757192 - L1MC4a LINE L1 0 7808 6840 796 272 27 27 chr2 51930667 51930891 -198756963 + MER58A DNA MER1_type 1 224 0 1852 173 66 118 chr2 51931276 51931854 -198756000 + MER44D DNA MER2_type 3 605 0 1750 122 93 0 chr2 51932695 51932965 -198754889 + AluSc SINE Alu 1 295 -14 25 0 0 0 chr2 51933157 51933182 -198754672 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 51933373 51933396 -198754458 + AT_rich Low_complexity Low_complexity 1 23 0 6524 127 128 32 chr2 51934819 51936166 -198751688 - pTR5 LTR ERV1 -238 2200 292 253 216 0 0 chr2 51936650 51936701 -198751153 - L2 LINE L2 -1 3312 3262 31 82 0 0 chr2 51937052 51937125 -198750729 + AT_rich Low_complexity Low_complexity 1 73 0 406 377 6 0 chr2 51937338 51937497 -198750357 + MIR3 SINE MIR 20 179 -29 27 49 0 0 chr2 51937553 51937594 -198750260 + AT_rich Low_complexity Low_complexity 1 41 0 344 111 16 0 chr2 51938190 51938253 -198749601 + (GA)n Simple_repeat Simple_repeat 2 65 0 263 200 232 0 chr2 51940417 51940512 -198747342 - MER103 DNA DNA -32 134 18 1876 145 10 10 chr2 51940903 51941200 -198746654 + AluJo SINE Alu 1 297 -15 316 258 15 0 chr2 51941395 51941461 -198746393 - L2 LINE L2 -3 3269 3203 27 29 0 0 chr2 51941730 51941764 -198746090 + AT_rich Low_complexity Low_complexity 1 34 0 1388 186 3 61 chr2 51944732 51945044 -198742810 + AluJo SINE Alu 1 294 -18 898 286 14 0 chr2 51945108 51945321 -198742533 - MIR SINE MIR -45 217 2 191 36 36 0 chr2 51946154 51946182 -198741672 + (GAAAA)n Simple_repeat Simple_repeat 5 33 0 28 0 0 0 chr2 51947163 51947191 -198740663 + AT_rich Low_complexity Low_complexity 1 28 0 1752 24 0 0 chr2 51947191 51947399 -198740455 - L1PA5 LINE L1 -6 6148 5941 2030 132 3 0 chr2 51949042 51949338 -198738516 - AluSp SINE Alu -16 297 1 180 370 97 40 chr2 51949573 51949800 -198738054 - L2 LINE L2 0 3272 3033 286 237 82 41 chr2 51949933 51950030 -198737824 - MIR SINE MIR -20 242 142 459 0 0 0 chr2 51950231 51950282 -198737572 + (T)n Simple_repeat Simple_repeat 1 51 0 823 108 8 16 chr2 51950774 51950903 -198736951 - L1MB7 LINE L1 -19 6165 6038 195 186 0 0 chr2 51950971 51951014 -198736840 + (TTA)n Simple_repeat Simple_repeat 2 44 0 256 260 167 10 chr2 51951118 51951214 -198736640 - MIR SINE MIR -74 188 78 24 0 0 0 chr2 51952499 51952523 -198735331 + AT_rich Low_complexity Low_complexity 1 24 0 263 369 128 25 chr2 51953860 51954180 -198733674 - L2 LINE L2 0 3272 2920 198 0 0 0 chr2 51955265 51955287 -198732567 + (CAAA)n Simple_repeat Simple_repeat 1 22 0 536 264 207 5 chr2 51955983 51956176 -198731678 - MIR SINE MIR -25 237 6 287 313 76 35 chr2 51956302 51956500 -198731354 - MIR SINE MIR -50 212 7 23 54 0 0 chr2 51957539 51957576 -198730278 + AT_rich Low_complexity Low_complexity 1 37 0 186 43 0 0 chr2 51958918 51958941 -198728913 + (TA)n Simple_repeat Simple_repeat 2 24 0 616 309 52 16 chr2 51959271 51959465 -198728389 - MIR SINE MIR -50 212 12 283 266 121 0 chr2 51959713 51959837 -198728017 - MIR SINE MIR -12 250 112 335 323 122 30 chr2 51959906 51960275 -198727579 + L1M4 LINE L1 3789 4191 -1955 243 308 26 51 chr2 51960579 51960696 -198727158 + MIR SINE MIR 22 135 -73 212 179 0 0 chr2 51960993 51961032 -198726822 + A-rich Low_complexity Low_complexity 1 39 0 2424 67 0 6 chr2 51961609 51961921 -198725933 + AluY SINE Alu 1 310 -1 731 325 118 55 chr2 51962573 51962766 -198725088 - L3 LINE CR1 -2 1575 1396 1928 130 14 0 chr2 51962766 51963058 -198724796 + AluSx SINE Alu 6 301 -11 731 325 118 55 chr2 51963058 51963608 -198724246 - L3 LINE CR1 -181 1396 785 239 319 35 14 chr2 51964113 51964254 -198723600 + MIR SINE MIR 117 260 -2 287 294 15 0 chr2 51964547 51964615 -198723239 + L2 LINE L2 3204 3272 0 197 352 131 21 chr2 51964693 51964838 -198723016 + L2 LINE L2 3112 3272 0 198 280 80 50 chr2 51965272 51965372 -198722482 - L2 LINE L2 -2 3311 3209 6015 155 24 17 chr2 51965460 51966593 -198721261 + L1MC1 LINE L1 5197 6325 -8 250 96 0 19 chr2 51966597 51966649 -198721205 - LTR66 LTR ERVL -166 444 394 21 36 0 0 chr2 51966653 51966681 -198721173 + AT_rich Low_complexity Low_complexity 1 28 0 607 311 57 16 chr2 51966789 51967033 -198720821 - MIR SINE MIR -6 256 3 516 186 10 10 chr2 51969637 51969734 -198718120 - MER5A DNA MER1_type -84 105 9 27 29 0 0 chr2 51971609 51971643 -198716211 + AT_rich Low_complexity Low_complexity 1 34 0 243 250 0 31 chr2 51971712 51971776 -198716078 + (CATA)n Simple_repeat Simple_repeat 2 63 0 566 170 75 145 chr2 51972365 51972425 -198715429 - MIR SINE MIR -13 249 186 1947 118 10 3 chr2 51972425 51972713 -198715141 - AluSg SINE Alu -12 298 9 566 170 75 145 chr2 51972713 51972852 -198715002 - MIR SINE MIR -76 186 64 452 154 0 145 chr2 51972881 51972998 -198714856 - MER2 DNA MER2_type -221 124 25 1582 300 175 17 chr2 51974453 51975671 -198712183 - L2 LINE L2 -3 3310 1880 782 261 30 0 chr2 51975914 51976140 -198711714 - L1ME1 LINE L1 -45 6121 5895 247 282 14 0 chr2 51976381 51976452 -198711402 + (CATATA)n Simple_repeat Simple_repeat 1 72 0 192 77 0 0 chr2 51976720 51976746 -198711108 + (TTG)n Simple_repeat Simple_repeat 2 27 0 33 25 0 0 chr2 51978254 51978294 -198709560 + AT_rich Low_complexity Low_complexity 1 40 0 1890 136 0 4 chr2 51980104 51980422 -198707432 + AluSq SINE Alu 5 321 0 21 0 0 0 chr2 51980880 51980901 -198706953 + AT_rich Low_complexity Low_complexity 1 21 0 318 239 134 35 chr2 51981382 51981524 -198706330 - MIR SINE MIR -28 234 79 227 208 125 42 chr2 51982073 51982169 -198705685 + MER103 DNA DNA 17 120 -46 241 265 108 29 chr2 51982895 51982997 -198704857 + L2 LINE L2 3162 3271 -1 186 103 0 0 chr2 51983364 51983393 -198704461 + (TG)n Simple_repeat Simple_repeat 1 29 0 2312 94 0 0 chr2 51983707 51984005 -198703849 - AluY SINE Alu -13 298 1 257 377 68 0 chr2 51985119 51985265 -198702589 - MIR3 SINE MIR -3 205 50 2249 80 3 0 chr2 51986818 51987104 -198700750 + AluY SINE Alu 8 294 -17 216 0 0 0 chr2 51987107 51987131 -198700723 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 440 164 9 60 chr2 51988516 51988632 -198699222 + L1MA7 LINE L1 6177 6286 -5 2171 117 3 0 chr2 51990447 51990747 -198697107 + AluSx SINE Alu 4 304 -8 234 0 0 0 chr2 51991002 51991028 -198696826 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 21 71 0 0 chr2 51991294 51991336 -198696518 + AT_rich Low_complexity Low_complexity 1 42 0 433 285 35 112 chr2 51991881 51992239 -198695615 - Charlie8 DNA MER1_type -995 1422 1 220 300 12 0 chr2 51992282 51992362 -198695492 + (TA)n Simple_repeat Simple_repeat 2 82 0 6315 147 11 8 chr2 51992632 51994013 -198693841 + L1MA4A LINE L1 4914 6300 -3 26 74 0 0 chr2 51994112 51994166 -198693688 + AT_rich Low_complexity Low_complexity 1 54 0 262 155 56 0 chr2 51994515 51994586 -198693268 + GA-rich Low_complexity Low_complexity 2 76 0 190 361 44 29 chr2 51994650 51994855 -198692999 + L3b LINE CR1 1253 1460 -123 216 158 0 0 chr2 51996031 51996069 -198691785 + (TATG)n Simple_repeat Simple_repeat 3 40 0 516 228 50 110 chr2 51996558 51996922 -198690932 - L1MC4 LINE L1 -5 8037 7696 2041 64 0 0 chr2 51997624 51997875 -198689979 + L1P3 LINE L1 5538 5788 -366 407 325 24 8 chr2 51999649 51999772 -198688082 + MIR SINE MIR 62 186 -76 220 372 39 23 chr2 52001040 52001169 -198686685 + L2 LINE L2 3138 3268 -4 228 333 78 11 chr2 52002226 52002316 -198685538 + MLT1K LTR MaLR 135 230 -358 888 231 21 34 chr2 52002987 52003254 -198684600 + L1MB7 LINE L1 5928 6173 -9 2297 147 28 13 chr2 52003425 52003819 -198684035 - L1MB3 LINE L1 0 6183 5784 513 211 0 0 chr2 52003819 52003914 -198683940 - Tigger7 DNA MER2_type 0 2587 2493 7553 177 51 45 chr2 52003914 52005590 -198682264 - L1M4c LINE L1 -4693 1691 5 961 83 0 69 chr2 52005635 52005779 -198682075 + L1PB1 LINE L1 6018 6151 0 249 289 61 61 chr2 52006905 52007216 -198680638 + L1ME LINE L1 5514 5824 -297 396 269 39 16 chr2 52007395 52007558 -198680296 + L1ME4a LINE L1 1196 6120 -1 209 403 22 29 chr2 52007721 52007860 -198679994 + MIR SINE MIR 3 140 -122 388 278 0 17 chr2 52008337 52008452 -198679402 - MIR SINE MIR 0 262 150 396 0 0 0 chr2 52009465 52009509 -198678345 + (TG)n Simple_repeat Simple_repeat 2 45 0 234 0 0 0 chr2 52010475 52010501 -198677353 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2289 112 0 0 chr2 52011659 52011954 -198675900 + AluSq SINE Alu 1 295 -18 218 146 0 18 chr2 52013228 52013283 -198674571 + (GGAA)n Simple_repeat Simple_repeat 1 54 0 22 80 0 0 chr2 52014231 52014281 -198673573 + AT_rich Low_complexity Low_complexity 1 50 0 21 71 0 0 chr2 52014434 52014476 -198673378 + AT_rich Low_complexity Low_complexity 1 42 0 204 40 0 0 chr2 52014562 52014587 -198673267 + (TA)n Simple_repeat Simple_repeat 1 25 0 2209 109 0 13 chr2 52016749 52017053 -198670801 - AluSx SINE Alu -12 300 1 362 248 40 10 chr2 52017061 52017162 -198670692 + MIR SINE MIR 96 199 -63 276 271 0 14 chr2 52017375 52017445 -198670409 + MLT1E1 LTR MaLR 57 125 -529 1454 147 22 13 chr2 52017446 52017677 -198670177 + MER46A DNA MER2_type 1 233 -3 540 30 0 0 chr2 52017677 52017743 -198670111 + (TG)n Simple_repeat Simple_repeat 2 67 0 1252 247 10 10 chr2 52017761 52018061 -198669793 + MLT1E2 LTR MaLR 327 626 0 599 282 6 25 chr2 52019080 52019243 -198668611 - MER5B DNA MER1_type -1 177 18 503 314 110 0 chr2 52020455 52020691 -198667163 - MIR SINE MIR 0 262 1 2184 117 3 0 chr2 52020833 52021141 -198666713 + AluSg SINE Alu 1 309 -1 193 270 54 27 chr2 52021298 52021372 -198666482 - L2 LINE L2 -467 2847 2772 285 222 0 0 chr2 52021390 52021444 -198666410 + MER112 DNA MER1_type 8 61 -199 216 0 0 0 chr2 52021542 52021566 -198666288 + (CA)n Simple_repeat Simple_repeat 1 24 0 911 177 43 126 chr2 52021582 52021683 -198666171 + MER46A DNA MER2_type 3 111 -2620 266 0 29 0 chr2 52021683 52021717 -198666137 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1778 159 0 4 chr2 52021721 52021997 -198665857 - AluSx SINE Alu -37 275 1 911 177 43 126 chr2 52021997 52022144 -198665710 + MER46A DNA MER2_type 114 235 -1 348 24 0 0 chr2 52022157 52022198 -198665656 + (TG)n Simple_repeat Simple_repeat 1 41 0 2383 161 33 33 chr2 52022207 52022637 -198665217 - Tigger2a DNA MER2_type -1 433 4 219 36 0 0 chr2 52022637 52022665 -198665189 + (TG)n Simple_repeat Simple_repeat 2 29 0 256 253 71 33 chr2 52022679 52022861 -198664993 + MER112 DNA MER1_type 66 254 -6 2095 108 3 14 chr2 52024081 52024376 -198663478 - AluSx SINE Alu -20 292 1 741 130 0 168 chr2 52024394 52024513 -198663341 - AluJo SINE Alu -177 135 48 1744 92 149 0 chr2 52024513 52024774 -198663080 - AluSg1 SINE Alu -9 300 1 741 130 0 168 chr2 52024774 52024815 -198663039 - AluJo SINE Alu -264 48 2 249 57 0 0 chr2 52025710 52025745 -198662109 + (TG)n Simple_repeat Simple_repeat 2 36 0 237 159 0 0 chr2 52026430 52026474 -198661380 + (CA)n Simple_repeat Simple_repeat 1 44 0 407 214 71 64 chr2 52026911 52027012 -198660842 + MIR SINE MIR 49 153 -109 2179 97 3 45 chr2 52027012 52027321 -198660533 - AluSx SINE Alu -16 296 1 407 214 71 64 chr2 52027321 52027359 -198660495 + MIR SINE MIR 153 189 -73 187 232 61 61 chr2 52027725 52027824 -198660030 - MIR SINE MIR -72 136 38 796 239 54 11 chr2 52027868 52028052 -198659802 + MIR SINE MIR 45 236 -26 646 233 143 23 chr2 52028732 52029047 -198658807 + MLT1G LTR MaLR 217 580 -10 288 275 178 35 chr2 52029213 52029471 -198658383 - L2 LINE L2 -51 3221 2927 1975 108 6 51 chr2 52029475 52029789 -198658065 + AluSx SINE Alu 1 300 -12 1228 137 9 58 chr2 52029987 52030213 -198657641 - AluJb SINE Alu -95 217 3 265 182 0 0 chr2 52030217 52030272 -198657582 - L1M4 LINE L1 -2222 3924 3870 1860 121 101 49 chr2 52030272 52030618 -198657236 + MLT1B LTR MaLR 1 364 -26 522 306 26 17 chr2 52030641 52030873 -198656981 + ERVL LTR ERVL 3408 3641 -2123 838 222 67 44 chr2 52031111 52031336 -198656518 + MIR SINE MIR 12 241 -21 618 319 32 5 chr2 52031427 52031643 -198656211 + ERVL LTR ERVL 5193 5414 -350 313 113 16 32 chr2 52031738 52031800 -198656054 + MSTA LTR MaLR 1 61 -367 2237 97 10 10 chr2 52033440 52033748 -198654106 - AluSx SINE Alu -4 308 1 2313 80 10 0 chr2 52033749 52034048 -198653806 - AluSq SINE Alu -11 302 1 421 308 108 26 chr2 52034112 52034417 -198653437 + L2 LINE L2 2810 3139 -174 407 62 0 0 chr2 52034679 52034727 -198653127 + Alu SINE Alu 2 49 -261 1064 202 29 72 chr2 52034829 52034926 -198652928 + L1M4 LINE L1 2983 3083 -3063 2161 101 0 18 chr2 52034926 52035234 -198652620 + AluSc SINE Alu 1 303 0 1064 202 29 72 chr2 52035234 52035482 -198652372 + L1M4 LINE L1 3083 3314 -2832 1066 114 93 52 chr2 52035489 52035590 -198652264 - Tigger1 DNA MER2_type -1 2417 2322 2116 76 58 0 chr2 52035590 52035867 -198651987 + AluSq SINE Alu 1 293 -20 1066 114 93 52 chr2 52035867 52035958 -198651896 - Tigger1 DNA MER2_type -96 2322 2217 442 86 12 49 chr2 52036086 52036167 -198651687 - LTR43 LTR ERV1 -349 253 176 746 93 0 0 chr2 52036217 52036314 -198651540 - AluSx SINE Alu -11 301 205 1142 103 7 0 chr2 52036316 52036462 -198651392 - AluSx SINE Alu -166 147 1 2320 85 0 0 chr2 52036471 52036765 -198651089 - AluY SINE Alu -17 294 1 1017 183 6 11 chr2 52036765 52036940 -198650914 - FRAM SINE Alu -6 170 1 2394 80 0 0 chr2 52036944 52037244 -198650610 - AluSx SINE Alu -12 300 1 261 118 0 0 chr2 52037290 52037341 -198650513 + (TA)n Simple_repeat Simple_repeat 2 52 0 2228 85 16 10 chr2 52037482 52037787 -198650067 - AluSq SINE Alu -6 307 1 353 217 133 36 chr2 52037793 52037884 -198649970 - L1MC/D LINE L1 -2331 5477 5396 339 162 54 27 chr2 52037884 52037958 -198649896 - MER116 DNA Mariner -4 76 1 353 217 133 36 chr2 52037958 52038032 -198649822 - L1MC/D LINE L1 -2412 5396 5296 2515 62 0 7 chr2 52038064 52038369 -198649485 - AluY SINE Alu -8 303 1 349 41 0 20 chr2 52038379 52038428 -198649426 - AluY SINE Alu -251 48 1 2099 134 3 3 chr2 52038537 52038844 -198649010 - AluJb SINE Alu -5 307 1 358 200 14 0 chr2 52038858 52038928 -198648926 - L1MC4a LINE L1 -504 7304 7234 955 62 23 31 chr2 52038928 52039058 -198648796 + AluSc SINE Alu 1 129 -180 624 281 114 45 chr2 52039177 52039536 -198648318 - L1M4 LINE L1 -6095 447 64 194 200 0 0 chr2 52039623 52039658 -198648196 + MIR SINE MIR 116 150 -58 2072 115 20 10 chr2 52039710 52040005 -198647849 + AluSx SINE Alu 1 298 -14 683 110 55 9 chr2 52040543 52040652 -198647202 - AluJb SINE Alu -8 304 191 195 42 0 0 chr2 52041359 52041383 -198646471 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1389 93 0 0 chr2 52041389 52041571 -198646283 - AluSg/x SINE Alu -9 303 122 21 0 0 0 chr2 52041571 52041592 -198646262 + AT_rich Low_complexity Low_complexity 1 21 0 2172 93 17 3 chr2 52041592 52041882 -198645972 - AluSp SINE Alu -19 294 1 208 314 35 0 chr2 52042091 52042177 -198645677 - MIR SINE MIR -167 95 7 32 0 0 0 chr2 52042898 52042930 -198644924 + GC_rich Low_complexity Low_complexity 1 32 0 217 217 0 0 chr2 52043204 52043250 -198644604 + CT-rich Low_complexity Low_complexity 1 46 0 220 163 47 0 chr2 52045487 52045530 -198642324 - MER5A DNA MER1_type -84 105 61 400 290 7 41 chr2 52045803 52045948 -198641906 + MIR SINE MIR 21 160 -102 4960 34 2 2 chr2 52046082 52046641 -198641213 - L1PA4 LINE L1 -3 6152 5594 2539 60 3 0 chr2 52046643 52046943 -198640911 - AluY SINE Alu -10 301 1 1869 153 33 7 chr2 52047057 52047358 -198640496 + AluJo SINE Alu 1 309 -3 281 270 119 19 chr2 52047922 52048092 -198639762 + MIR SINE MIR 15 194 -59 355 247 139 38 chr2 52049147 52049305 -198638549 + MIR SINE MIR 82 255 -7 398 225 27 27 chr2 52049363 52049474 -198638380 + MIR SINE MIR 111 221 -41 608 204 19 118 chr2 52049849 52049977 -198637877 + LTR41 LTR ERVL 530 619 -154 1814 166 3 6 chr2 52049977 52050290 -198637564 - AluJb SINE Alu 0 312 1 608 204 19 118 chr2 52050290 52050431 -198637423 + LTR41 LTR ERVL 618 772 -1 1696 170 6 35 chr2 52050453 52050765 -198637089 - AluJo SINE Alu -9 303 1 958 89 0 0 chr2 52050791 52050914 -198636940 + AluSq/x SINE Alu 1 123 -190 456 278 84 81 chr2 52051152 52051594 -198636260 - L2 LINE L2 -16 3256 2814 180 289 22 0 chr2 52051719 52051764 -198636090 - L2 LINE L2 -24 3248 3203 * 492 226 221 21 chr2 52051760 52051950 -198635904 - MIR SINE MIR 0 262 35 307 217 43 0 chr2 52052867 52052936 -198634918 + MIR3 SINE MIR 83 154 -54 2113 119 0 0 chr2 52052945 52053240 -198634614 - AluSx SINE Alu -17 295 1 424 236 8 27 chr2 52053285 52053416 -198634438 + MIR SINE MIR 71 198 -63 243 186 147 21 chr2 52053881 52053987 -198633867 + MIR SINE MIR 99 227 -35 287 340 57 0 chr2 52054052 52054158 -198633696 + MIR SINE MIR 16 127 -81 2069 123 0 0 chr2 52054444 52054736 -198633118 - AluSg SINE Alu -18 292 1 259 189 53 42 chr2 52054737 52054832 -198633022 + MER41E LTR ERV1 358 453 -59 468 218 40 0 chr2 52054848 52054949 -198632905 + MLT1F LTR MaLR 39 143 -447 1403 163 35 42 chr2 52054957 52055138 -198632716 - AluJo SINE Alu -18 294 114 2619 118 46 22 chr2 52055138 52055176 -198632678 - MSTA LTR MaLR -4 424 388 2084 110 7 3 chr2 52055176 52055476 -198632378 + AluSx SINE Alu 1 301 -11 2619 118 46 22 chr2 52055476 52055851 -198632003 - MSTA LTR MaLR -40 388 1 1403 163 35 42 chr2 52055851 52055957 -198631897 - AluJo SINE Alu -198 114 9 1192 208 25 36 chr2 52055964 52056238 -198631616 + MLT1F LTR MaLR 160 430 -112 1033 97 103 0 chr2 52056486 52056651 -198631203 + LTR47A LTR ERVL 261 442 -10 498 200 61 17 chr2 52056654 52056769 -198631085 + MLT1F LTR MaLR 448 567 0 1768 149 0 14 chr2 52056780 52057062 -198630792 + AluJo SINE Alu 1 278 -34 653 149 35 0 chr2 52057212 52057326 -198630528 + FLAM_A SINE Alu 14 131 -11 937 165 269 7 chr2 52057431 52057710 -198630144 - MLT1D LTR MaLR 0 505 154 486 207 179 14 chr2 52057715 52057860 -198629994 + MIR SINE MIR 42 210 -52 1980 112 7 13 chr2 52057879 52058221 -198629633 - AluSq SINE Alu 0 313 1 267 207 169 19 chr2 52059285 52059404 -198628450 + MIR3 SINE MIR 22 156 -52 652 198 220 0 chr2 52059464 52059641 -198628213 - MIR SINE MIR -18 244 29 1281 76 27 5 chr2 52059697 52059882 -198627972 - AluSc SINE Alu -2 307 119 1854 126 94 15 chr2 52060015 52060356 -198627498 + THE1C LTR MaLR 8 375 0 920 204 11 6 chr2 52060356 52060532 -198627322 + MER20 DNA MER1_type 37 213 -6 2196 133 99 8 chr2 52060678 52061070 -198626784 + MSTA LTR MaLR 1 428 0 1752 102 0 4 chr2 52061732 52061977 -198625877 - AluY SINE Alu -67 244 1 353 143 0 104 chr2 52061977 52062054 -198625800 + Tigger1 DNA MER2_type 2 70 -2348 1256 53 0 0 chr2 52062054 52062206 -198625648 + AluY SINE Alu 145 296 -15 2193 128 50 0 chr2 52062206 52062543 -198625311 + Tigger1 DNA MER2_type 296 649 -1769 1513 143 4 8 chr2 52062543 52062794 -198625060 + AluJb SINE Alu 1 250 -62 3036 104 25 0 chr2 52062813 52063253 -198624601 + Tigger1 DNA MER2_type 1658 2108 -310 511 280 187 0 chr2 52063636 52063818 -198624036 + MIR SINE MIR 1 216 -46 328 312 63 37 chr2 52064013 52064202 -198623652 - MIR SINE MIR -56 206 13 366 296 21 63 chr2 52064594 52064736 -198623118 - L1MC4 LINE L1 -1300 6742 6607 21 0 0 0 chr2 52065355 52065376 -198622478 + AT_rich Low_complexity Low_complexity 1 21 0 1966 95 7 11 chr2 52066004 52066313 -198621541 - AluSq SINE Alu 0 308 1 413 41 0 0 chr2 52066313 52066362 -198621492 - AluY SINE Alu -259 50 2 400 143 0 88 chr2 52066369 52066460 -198621394 - AluS SINE Alu -229 84 2 765 93 76 0 chr2 52066462 52066580 -198621274 + L1MD1 LINE L1 6108 6234 -8 1429 118 32 4 chr2 52066581 52066827 -198621027 + AluSq SINE Alu 1 253 -60 62 72 0 0 chr2 52067456 52067581 -198620273 + GC_rich Low_complexity Low_complexity 1 125 0 511 290 94 31 chr2 52067691 52067915 -198619939 - LTR16A LTR ERVL -7 443 206 2082 163 8 35 chr2 52067982 52068356 -198619498 - THE1B LTR MaLR 0 364 1 1778 103 12 0 chr2 52068356 52068609 -198619245 - THE1B-int LTR MaLR 0 1580 1325 1096 255 46 30 chr2 52068738 52069067 -198618787 - L1M4b LINE L1 -5817 1042 709 1854 124 37 10 chr2 52069075 52069373 -198618481 - AluSx SINE Alu -6 306 1 560 254 185 0 chr2 52069382 52069555 -198618299 - MIR SINE MIR -49 213 9 276 207 17 0 chr2 52069766 52069824 -198618030 - MIR SINE MIR -123 139 81 212 261 62 31 chr2 52069843 52069908 -198617946 + L2 LINE L2 3150 3216 -56 1820 124 11 7 chr2 52069912 52070220 -198617634 - AluSx SINE Alu 0 309 1 220 284 30 0 chr2 52070280 52070347 -198617507 + MIR SINE MIR 150 218 -44 205 354 63 38 chr2 52070818 52070976 -198616878 - MIR SINE MIR -48 214 53 2128 156 7 42 chr2 52071558 52071962 -198615892 + MLT1B LTR MaLR 1 390 0 567 279 98 37 chr2 52072066 52072159 -198615695 - MER112 DNA MER1_type -1 259 173 588 29 0 0 chr2 52072159 52072229 -198615625 + (AATAG)n Simple_repeat Simple_repeat 4 73 0 567 279 98 37 chr2 52072229 52072379 -198615475 - MER112 DNA MER1_type -87 173 1 263 402 0 0 chr2 52072397 52072494 -198615360 + L2 LINE L2 3173 3269 -3 949 251 84 14 chr2 52072518 52072998 -198614856 + L2 LINE L2 2553 3070 -243 2540 118 24 75 chr2 52073039 52073375 -198614479 + MSTA LTR MaLR 1 310 -118 2181 115 3 0 chr2 52073375 52073687 -198614167 - AluSp SINE Alu 0 313 1 2540 118 24 75 chr2 52073687 52073801 -198614053 + MSTA LTR MaLR 310 428 0 352 115 0 49 chr2 52073824 52073877 -198613977 + MSTC LTR MaLR 1 50 -378 433 111 0 0 chr2 52073877 52073940 -198613914 - MER4E LTR ERV1 0 766 704 293 24 49 0 chr2 52074692 52074733 -198613121 + (TTTAA)n Simple_repeat Simple_repeat 3 45 0 257 255 69 81 chr2 52075094 52075341 -198612513 - L1ME4a LINE L1 -6 6115 5872 348 272 45 0 chr2 52075558 52075664 -198612190 + MIR3 SINE MIR 75 185 -23 1204 190 91 8 chr2 52077061 52077314 -198610540 - AluJo SINE Alu -38 274 1 458 296 38 0 chr2 52077332 52077464 -198610390 - MIR3 SINE MIR -63 145 9 1102 186 0 78 chr2 52077476 52077707 -198610147 + MER58A DNA MER1_type 4 216 -8 338 252 19 15 chr2 52078200 52078298 -198609556 - MIR SINE MIR -90 118 19 943 125 0 0 chr2 52079184 52079320 -198608534 - AluSq/x SINE Alu -177 136 1 1573 181 3 22 chr2 52079582 52079932 -198607922 + AluJo SINE Alu 3 346 0 1332 143 34 115 chr2 52079942 52080067 -198607787 + AluJo SINE Alu 6 140 -172 1840 162 13 0 chr2 52080067 52080375 -198607479 + AluSq SINE Alu 1 312 -1 1332 143 34 115 chr2 52080375 52080570 -198607284 + AluJo SINE Alu 140 300 -12 2024 107 3 24 chr2 52080570 52080868 -198606986 + AluSg SINE Alu 1 292 -18 33 0 0 0 chr2 52080868 52080901 -198606953 + AT_rich Low_complexity Low_complexity 1 33 0 2210 93 0 7 chr2 52080909 52081209 -198606645 + AluSx SINE Alu 1 298 -14 2336 67 3 7 chr2 52081254 52081553 -198606301 + AluY SINE Alu 1 298 -13 431 214 68 52 chr2 52081611 52081803 -198606051 + L1ME4a LINE L1 5901 6095 -26 212 182 0 0 chr2 52081804 52081837 -198606017 + L2 LINE L2 3222 3254 -18 258 262 71 36 chr2 52082217 52082301 -198605553 + MIR3 SINE MIR 13 99 -109 238 208 21 0 chr2 52082336 52082384 -198605470 + MIR SINE MIR 88 136 -72 420 241 12 0 chr2 52083764 52083847 -198604007 - MIR SINE MIR -170 92 9 417 39 0 0 chr2 52085180 52085231 -198602623 + (TC)n Simple_repeat Simple_repeat 2 52 0 31 0 0 0 chr2 52085308 52085339 -198602515 + AT_rich Low_complexity Low_complexity 1 31 0 1705 238 17 39 chr2 52085666 52086207 -198601647 + L1MC2 LINE L1 4749 5277 -869 2089 103 6 10 chr2 52086208 52086520 -198601334 + AluSx SINE Alu 1 311 -1 2316 171 35 22 chr2 52086524 52086915 -198600939 + L1MC2 LINE L1 5427 5826 -518 2158 113 3 10 chr2 52086915 52087225 -198600629 + AluSq SINE Alu 3 310 -3 2316 171 35 22 chr2 52087225 52087289 -198600565 + L1MC2 LINE L1 5826 5888 -456 2236 87 0 0 chr2 52087289 52087575 -198600279 + AluSq SINE Alu 1 286 -27 360 0 0 0 chr2 52087592 52087632 -198600222 + (CAT)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr2 52087682 52087710 -198600144 + AT_rich Low_complexity Low_complexity 1 28 0 704 237 5 11 chr2 52087710 52087900 -198599954 + MER20B DNA MER1_type 226 414 -369 677 204 0 0 chr2 52087901 52088043 -198599811 + L1MA4 LINE L1 6156 6297 -3 2010 111 7 7 chr2 52088050 52088339 -198599515 + AluSq SINE Alu 1 289 -24 219 88 0 0 chr2 52088349 52088383 -198599471 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 2037 103 3 7 chr2 52088417 52088708 -198599146 + AluSg SINE Alu 1 290 -20 2137 127 0 0 chr2 52088732 52089040 -198598814 + AluSx SINE Alu 1 308 -4 567 255 137 29 chr2 52089099 52089377 -198598477 + MER20B DNA MER1_type 439 746 -37 229 307 55 16 chr2 52089486 52089613 -198598241 + L2 LINE L2 2852 2983 -289 604 232 196 13 chr2 52089704 52090010 -198597844 + MER113 DNA MER1_type? 90 451 -70 490 327 71 41 chr2 52090137 52090718 -198597136 + L1M4 LINE L1 3073 3500 -2646 2107 110 7 3 chr2 52091185 52091493 -198596361 - AluSp SINE Alu -4 309 1 2311 199 48 12 chr2 52091539 52091616 -198596238 - L1MD2 LINE L1 -12 6347 6274 1840 135 0 40 chr2 52091616 52091920 -198595934 - AluSx SINE Alu -19 293 2 2311 199 48 12 chr2 52091920 52092387 -198595467 - L1MD2 LINE L1 -85 6274 5782 490 294 154 24 chr2 52093104 52093231 -198594623 - L1ME3A LINE L1 -300 5870 5761 1892 121 3 14 chr2 52093231 52093394 -198594460 - AluSq SINE Alu -19 294 134 2167 95 7 13 chr2 52093394 52093698 -198594156 - AluSx SINE Alu -10 302 1 1892 121 3 14 chr2 52093698 52093831 -198594023 - AluSq SINE Alu -179 134 1 490 294 154 24 chr2 52093831 52094209 -198593645 - L1ME3A LINE L1 -409 5761 5299 1887 148 3 3 chr2 52094230 52094533 -198593321 - AluSx SINE Alu -9 303 1 340 240 0 120 chr2 52094534 52094576 -198593278 - L1ME3A LINE L1 -864 5282 5237 1336 167 104 44 chr2 52094576 52094818 -198593036 - MER44D DNA MER2_type -1882 609 383 2080 124 0 0 chr2 52094818 52095117 -198592737 - AluSx SINE Alu -13 299 1 1336 167 104 44 chr2 52095117 52095191 -198592663 - MER44D DNA MER2_type -2108 383 4 340 240 0 120 chr2 52095191 52095230 -198592624 - L1ME3A LINE L1 -909 5237 5218 2130 85 7 7 chr2 52095230 52095523 -198592331 - AluSq SINE Alu -19 294 2 340 240 0 120 chr2 52095523 52095565 -198592289 - L1ME3A LINE L1 -928 5218 5173 1603 172 39 0 chr2 52095578 52095863 -198591991 - AluJb SINE Alu -14 298 3 24 67 0 0 chr2 52097497 52097542 -198590312 + AT_rich Low_complexity Low_complexity 1 45 0 422 333 104 0 chr2 52097670 52097862 -198589992 + MIR SINE MIR 1 212 -50 250 281 187 89 chr2 52099158 52099361 -198588493 - L2 LINE L2 -50 3222 3000 1826 161 0 0 chr2 52100542 52100845 -198587009 - AluSx SINE Alu 0 305 3 815 255 5 0 chr2 52101247 52101447 -198586407 - MLT1B LTR MaLR 0 390 190 1127 222 41 75 chr2 52101884 52102271 -198585583 + MLT1A2 LTR MaLR 1 374 0 2018 133 51 23 chr2 52102377 52102731 -198585123 + THE1B LTR MaLR 1 364 0 548 107 12 12 chr2 52102735 52102819 -198585035 + THE1B-int LTR MaLR 5 88 -1492 493 261 46 27 chr2 52103186 52103386 -198584468 + MIR SINE MIR 2 205 -57 181 273 0 0 chr2 52103861 52103905 -198583949 + L2 LINE L2 2932 2975 -339 2226 105 3 0 chr2 52104272 52104567 -198583287 - AluSg SINE Alu -14 296 1 195 42 0 0 chr2 52105194 52105218 -198582636 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 6195 57 5 0 chr2 52105443 52106229 -198581625 - L1PA7 LINE L1 -3 6151 5362 2015 115 3 3 chr2 52106733 52107019 -198580835 - AluSg SINE Alu -24 286 1 251 224 166 4 chr2 52107286 52107385 -198580469 - MIR SINE MIR -71 137 34 488 276 98 34 chr2 52107482 52107779 -198580075 - L2 LINE L2 -1 3312 2997 912 207 21 98 chr2 52107901 52108128 -198579726 + L1ME1 LINE L1 5812 6008 -158 1699 188 7 0 chr2 52108128 52108426 -198579428 + AluJo SINE Alu 1 300 -12 912 207 21 98 chr2 52108426 52108526 -198579328 + L1ME1 LINE L1 6008 6114 -52 2183 75 0 41 chr2 52108526 52108860 -198578994 - AluSx SINE Alu 0 322 1 572 169 0 97 chr2 52108860 52108918 -198578936 + L1MA10 LINE L1 6256 6318 -16 285 281 61 26 chr2 52109254 52109368 -198578486 - MIR SINE MIR -129 133 16 187 197 30 61 chr2 52109984 52110050 -198577804 + MIR SINE MIR 82 145 -63 208 319 9 9 chr2 52111054 52111167 -198576687 - MIR SINE MIR -129 133 21 2078 137 3 0 chr2 52112393 52112699 -198575155 + AluSx SINE Alu 1 307 -5 24 67 0 0 chr2 52113743 52113788 -198574066 + AT_rich Low_complexity Low_complexity 1 45 0 396 344 104 0 chr2 52113916 52114108 -198573746 + MIR SINE MIR 1 212 -50 531 280 187 0 chr2 52114281 52114463 -198573391 + MIR SINE MIR 1 216 -46 325 307 63 37 chr2 52114659 52114848 -198573006 - MIR SINE MIR -56 206 13 212 247 0 12 chr2 52115295 52115376 -198572478 + (TA)n Simple_repeat Simple_repeat 2 81 0 201 271 51 17 chr2 52115688 52115747 -198572107 - L2 LINE L2 -7 3265 3205 886 233 5 36 chr2 52116061 52116284 -198571570 - MER20 DNA MER1_type 0 219 4 818 203 23 17 chr2 52116827 52117004 -198570850 - L1PB4 LINE L1 -14 6142 5965 25 65 0 0 chr2 52117184 52117230 -198570624 + AT_rich Low_complexity Low_complexity 1 46 0 429 109 0 0 chr2 52117482 52117546 -198570308 + (TC)n Simple_repeat Simple_repeat 2 65 0 310 286 126 39 chr2 52117615 52117797 -198570057 + MIR3 SINE MIR 3 200 -8 21 0 0 0 chr2 52119713 52119734 -198568120 + AT_rich Low_complexity Low_complexity 1 21 0 1601 141 30 54 chr2 52119734 52120031 -198567823 - AluJo SINE Alu -22 290 1 1031 194 96 96 chr2 52120125 52120521 -198567333 + MSTD LTR MaLR 1 396 0 201 234 0 0 chr2 52121210 52121257 -198566597 + MIR SINE MIR 94 140 -68 182 341 0 0 chr2 52121897 52121941 -198565913 + L2 LINE L2 3213 3256 -16 24 0 0 0 chr2 52123232 52123256 -198564598 + AT_rich Low_complexity Low_complexity 1 24 0 884 228 64 5 chr2 52123295 52123497 -198564357 + MER20 DNA MER1_type 1 214 -5 759 309 51 0 chr2 52124441 52124677 -198563177 - MIR SINE MIR -5 257 10 323 276 26 0 chr2 52124999 52125075 -198562779 + MIR SINE MIR 2 79 -183 821 290 80 32 chr2 52125137 52125513 -198562341 + MLT1J2 LTR MaLR 39 432 -18 4445 80 25 9 chr2 52127208 52127832 -198560022 - L1PA7 LINE L1 -1406 4740 4104 6798 64 10 0 chr2 52127832 52129231 -198558623 + L1PA7 LINE L1 4744 6151 -3 2393 91 3 3 chr2 52130310 52130619 -198557235 - AluSp SINE Alu -4 309 1 2295 197 48 12 chr2 52130665 52130742 -198557112 - L1MD2 LINE L1 -12 6347 6274 1952 135 0 36 chr2 52130742 52131045 -198556809 - AluSx SINE Alu -19 293 2 2295 197 48 12 chr2 52131045 52131512 -198556342 - L1MD2 LINE L1 -85 6274 5782 342 229 56 50 chr2 52132096 52132275 -198555579 + L1ME4a LINE L1 5765 5944 -177 1691 139 3 35 chr2 52132331 52132618 -198555236 - AluSx SINE Alu -30 282 5 21 36 0 0 chr2 52133462 52133490 -198554364 + AT_rich Low_complexity Low_complexity 1 28 0 200 170 0 43 chr2 52133710 52133757 -198554097 - MIR SINE MIR -61 201 157 278 323 115 0 chr2 52134309 52134405 -198553449 + MIR SINE MIR 34 140 -68 30 27 0 0 chr2 52135502 52135539 -198552315 + AT_rich Low_complexity Low_complexity 1 37 0 1651 102 20 0 chr2 52135664 52135908 -198551946 - L1PA10 LINE L1 -2 6166 5918 2414 119 3 0 chr2 52136411 52136771 -198551083 + L1PA14 LINE L1 5798 6158 -3 208 281 78 0 chr2 52137069 52137133 -198550721 + MIR3 SINE MIR 116 184 -24 236 250 113 25 chr2 52137980 52138060 -198549794 - MIR3 SINE MIR -44 164 78 300 53 0 0 chr2 52139236 52139274 -198548580 + (CA)n Simple_repeat Simple_repeat 2 39 0 249 263 138 20 chr2 52140799 52140945 -198546909 - L2 LINE L2 -6 3307 3144 315 333 0 20 chr2 52140945 52141047 -198546807 + MER5B DNA MER1_type 2 101 -77 892 273 12 16 chr2 52141323 52141565 -198546289 - MLT1F LTR MaLR 0 542 302 2122 110 0 0 chr2 52141923 52142231 -198545623 + AluY SINE Alu 1 308 0 321 68 0 0 chr2 52144040 52144084 -198543770 + (TG)n Simple_repeat Simple_repeat 2 45 0 232 234 0 0 chr2 52144571 52144618 -198543236 + (CTA)n Simple_repeat Simple_repeat 1 47 0 296 288 58 102 chr2 52144623 52144849 -198543005 - MIR SINE MIR -7 255 40 214 342 25 0 chr2 52144881 52144960 -198542894 + MIR SINE MIR 64 144 -64 2226 176 90 4 chr2 52145330 52145796 -198542058 + L1MB8 LINE L1 5672 6177 -1 360 94 0 0 chr2 52145909 52145962 -198541892 + (CA)n Simple_repeat Simple_repeat 2 54 0 180 0 0 0 chr2 52146376 52146396 -198541458 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 205 252 56 9 chr2 52146463 52146570 -198541284 + (TA)n Simple_repeat Simple_repeat 1 112 0 303 93 0 0 chr2 52146582 52146625 -198541229 + (CA)n Simple_repeat Simple_repeat 2 44 0 304 341 85 23 chr2 52147177 52147353 -198540501 - MIR SINE MIR -56 206 20 386 327 74 40 chr2 52149034 52149236 -198538618 - MIR SINE MIR 0 262 54 27 49 0 0 chr2 52150490 52150531 -198537323 + AT_rich Low_complexity Low_complexity 1 41 0 202 222 0 0 chr2 52150959 52150995 -198536859 + (CATA)n Simple_repeat Simple_repeat 4 39 0 521 248 68 59 chr2 52152884 52153106 -198534748 - L2 LINE L2 -1 3312 3089 193 328 0 0 chr2 52153298 52153359 -198534495 - L3 LINE CR1 -142 1435 1375 449 328 206 17 chr2 52153437 52153962 -198533892 - L3 LINE CR1 -367 1210 587 242 268 98 62 chr2 52154519 52154631 -198533223 - MIR SINE MIR -46 216 101 23 0 0 0 chr2 52155178 52155201 -198532653 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 52155414 52155438 -198532416 + AT_rich Low_complexity Low_complexity 1 24 0 791 206 7 7 chr2 52155774 52155929 -198531925 + FRAM SINE Alu 1 155 -11 185 177 16 129 chr2 52157579 52157641 -198530213 - L2 LINE L2 -3 3269 3215 1517 162 0 12 chr2 52159314 52159561 -198528293 + AluJo SINE Alu 10 253 -59 618 66 79 0 chr2 52159576 52159728 -198528126 + (TA)n Simple_repeat Simple_repeat 1 164 0 305 288 143 28 chr2 52162141 52162488 -198525366 + L1MC4a LINE L1 5525 5589 -532 33 66 0 0 chr2 52162657 52162718 -198525136 + AT_rich Low_complexity Low_complexity 1 61 0 21 36 0 0 chr2 52162892 52162920 -198524934 + AT_rich Low_complexity Low_complexity 1 28 0 478 299 83 25 chr2 52163942 52164146 -198523708 + MIR SINE MIR 31 246 -16 31 0 0 0 chr2 52164266 52164297 -198523557 + AT_rich Low_complexity Low_complexity 1 31 0 507 33 0 0 chr2 52164374 52164435 -198523419 + (GA)n Simple_repeat Simple_repeat 2 62 0 186 365 49 97 chr2 52165031 52165360 -198522494 - L2 LINE L2 -15 3257 2945 409 241 12 0 chr2 52165768 52165851 -198522003 + MIR SINE MIR 9 92 -170 197 369 83 12 chr2 52166090 52166174 -198521680 + L2 LINE L2 3151 3240 -32 266 258 15 0 chr2 52166174 52166240 -198521614 + GA-rich Low_complexity Low_complexity 2 68 0 389 299 9 9 chr2 52166628 52166735 -198521119 - L2 LINE L2 -9 3304 3198 24 0 0 0 chr2 52166965 52166989 -198520865 + AT_rich Low_complexity Low_complexity 1 24 0 433 343 65 28 chr2 52167273 52167489 -198520365 - L2 LINE L2 -547 2767 2544 510 186 59 0 chr2 52167503 52167605 -198520249 + MER3 DNA MER1_type 52 159 -50 581 222 60 12 chr2 52167628 52167795 -198520059 + MER3 DNA MER1_type 2257 2431 0 648 201 65 48 chr2 52167809 52168038 -198519816 + MER3 DNA MER1_type 2345 2577 0 488 243 41 12 chr2 52168133 52168302 -198519552 - L2 LINE L2 -918 2396 2223 391 228 109 0 chr2 52169332 52169433 -198518421 + MLT1F1 LTR MaLR 441 552 -15 233 103 0 26 chr2 52171894 52171933 -198515921 - L2 LINE L2 0 3313 3276 311 232 14 0 chr2 52171946 52172015 -198515839 + L2 LINE L2 3234 3303 -10 2302 108 0 0 chr2 52172078 52172385 -198515469 - AluSc SINE Alu -2 307 1 206 240 60 0 chr2 52172837 52172887 -198514967 - L2 LINE L2 -4 3309 3257 281 183 0 14 chr2 52173683 52173754 -198514100 + CT-rich Low_complexity Low_complexity 4 73 0 2029 131 0 0 chr2 52173912 52174220 -198513634 + AluSq SINE Alu 1 308 0 21 0 0 0 chr2 52174849 52174870 -198512984 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 52176225 52176248 -198511606 + AT_rich Low_complexity Low_complexity 1 23 0 1891 157 32 24 chr2 52177476 52177846 -198510008 + THE1C LTR MaLR 1 373 -2 631 261 88 66 chr2 52177913 52178139 -198509715 + MLT2B1 LTR ERVL 177 407 -113 269 303 64 18 chr2 52179252 52179361 -198508493 - MIR SINE MIR -65 143 30 480 18 0 0 chr2 52179363 52179420 -198508434 + (TA)n Simple_repeat Simple_repeat 2 58 0 727 284 62 21 chr2 52180312 52180555 -198507299 + MIR SINE MIR 2 254 -8 21 36 0 0 chr2 52180721 52180749 -198507105 + AT_rich Low_complexity Low_complexity 1 28 0 1425 154 41 0 chr2 52182746 52183012 -198504842 + L1MA6 LINE L1 6024 6300 0 51 17 0 0 chr2 52183100 52183158 -198504696 + AT_rich Low_complexity Low_complexity 1 58 0 701 121 9 0 chr2 52184380 52184496 -198503358 + L1MA6 LINE L1 6068 6184 -116 285 274 31 4 chr2 52185460 52185581 -198502273 - MIR SINE MIR -1 207 81 2367 187 28 58 chr2 52187102 52187669 -198500185 + L1MC4a LINE L1 7256 7805 -3 1437 196 7 14 chr2 52187719 52188000 -198499854 - AluJo SINE Alu -21 291 13 1778 149 29 62 chr2 52188563 52188871 -198498983 + AluJo SINE Alu 1 298 -14 252 328 0 0 chr2 52189195 52189256 -198498598 - L2 LINE L2 -8 3305 3245 2152 130 0 0 chr2 52189328 52189636 -198498218 - AluSx SINE Alu -4 308 1 22 0 0 0 chr2 52190125 52190147 -198497707 + AT_rich Low_complexity Low_complexity 1 22 0 450 152 0 0 chr2 52190485 52190564 -198497290 - L1PA10 LINE L1 0 6168 6090 227 158 84 32 chr2 52190699 52190794 -198497060 + (TATATG)n Simple_repeat Simple_repeat 5 104 0 14182 137 6 26 chr2 52190811 52191946 -198495908 - L1PA10 LINE L1 -89 6079 4924 2235 126 3 0 chr2 52191946 52192256 -198495598 - AluSx SINE Alu 0 312 2 14182 137 6 26 chr2 52192256 52194322 -198493532 - L1PA10 LINE L1 -1244 4924 2943 1546 184 0 33 chr2 52194502 52194806 -198493048 - AluJb SINE Alu -18 294 1 21 36 0 0 chr2 52195396 52195424 -198492430 + AT_rich Low_complexity Low_complexity 1 28 0 563 330 95 14 chr2 52196309 52196603 -198491251 + MLT1J LTR MaLR 12 329 -182 300 216 0 162 chr2 52196765 52196876 -198490978 - MIR SINE MIR -89 173 81 888 187 117 0 chr2 52197128 52197337 -198490517 + MER67C LTR ERV1 88 426 -235 34 24 0 0 chr2 52197532 52197573 -198490281 + AT_rich Low_complexity Low_complexity 1 41 0 8836 122 34 14 chr2 52197595 52199026 -198488828 - Tigger1 DNA MER2_type -82 2336 877 266 354 42 0 chr2 52199886 52199982 -198487872 - MER91B DNA MER1_type 0 190 91 425 298 48 8 chr2 52199993 52200117 -198487737 - MER91B DNA MER1_type -60 130 2 231 88 0 0 chr2 52200311 52200345 -198487509 + (T)n Simple_repeat Simple_repeat 1 34 0 347 299 88 20 chr2 52201545 52201692 -198486162 + MIR3 SINE MIR 37 193 -15 420 55 0 0 chr2 52202845 52202900 -198484954 + (CA)n Simple_repeat Simple_repeat 2 56 0 220 104 42 21 chr2 52204232 52204280 -198483574 + (TA)n Simple_repeat Simple_repeat 1 49 0 21 0 0 0 chr2 52205635 52205656 -198482198 + AT_rich Low_complexity Low_complexity 1 21 0 321 26 0 0 chr2 52205658 52205696 -198482158 + (TTA)n Simple_repeat Simple_repeat 2 39 0 2208 112 0 0 chr2 52205698 52205994 -198481860 - AluSx SINE Alu -16 296 1 208 156 58 13 chr2 52206075 52206229 -198481625 + (TA)n Simple_repeat Simple_repeat 1 161 0 333 0 0 0 chr2 52206232 52206269 -198481585 + (CA)n Simple_repeat Simple_repeat 2 38 0 1792 166 10 3 chr2 52207603 52207911 -198479943 + AluSx SINE Alu 1 310 -2 345 272 45 0 chr2 52208736 52208842 -198479012 - MIR3 SINE MIR -23 185 75 317 249 52 64 chr2 52209067 52209240 -198478614 + L1ME4a LINE L1 5881 6051 -70 293 24 49 0 chr2 52209667 52209708 -198478146 + (TTAAA)n Simple_repeat Simple_repeat 3 45 0 1982 119 42 0 chr2 52210369 52210654 -198477200 - AluSx SINE Alu -15 297 1 23 33 0 0 chr2 52211399 52211429 -198476425 + AT_rich Low_complexity Low_complexity 1 30 0 412 241 123 105 chr2 52212600 52212990 -198474864 + L1MC/D LINE L1 5264 5660 -2148 6007 67 1 27 chr2 52213441 52214267 -198473587 + L1PA8 LINE L1 5362 6166 -6 23 33 0 0 chr2 52215945 52215975 -198471879 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 52216306 52216327 -198471527 + AT_rich Low_complexity Low_complexity 1 21 0 798 147 19 0 chr2 52217074 52217231 -198470623 + CT-rich Low_complexity Low_complexity 4 163 0 208 222 0 0 chr2 52217231 52217267 -198470587 + polypyrimidine Low_complexity Low_complexity 2 37 0 1583 153 78 11 chr2 52217763 52217925 -198469929 - AluSx SINE Alu -11 301 151 532 29 78 0 chr2 52217925 52218028 -198469826 + (TA)n Simple_repeat Simple_repeat 1 111 0 1583 153 78 11 chr2 52218028 52218147 -198469707 - AluSx SINE Alu -161 151 1 2177 79 0 0 chr2 52219710 52219990 -198467864 + AluY SINE Alu 19 298 -13 383 303 97 7 chr2 52220172 52220317 -198467537 + MIR SINE MIR 27 184 -78 27 0 0 0 chr2 52220683 52220710 -198467144 + AT_rich Low_complexity Low_complexity 1 27 0 2304 37 3 47 chr2 52220718 52221017 -198466837 + AluY SINE Alu 1 286 -25 401 378 29 10 chr2 52221822 52222026 -198465828 - L2 LINE L2 -437 2877 2670 1072 244 0 33 chr2 52222064 52222306 -198465548 - MER8 DNA MER2_type 0 239 6 197 284 12 49 chr2 52222651 52222732 -198465122 + MIR SINE MIR 88 165 -97 205 304 89 0 chr2 52222749 52222828 -198465026 + L2 LINE L2 3197 3282 -31 189 0 0 0 chr2 52223595 52223616 -198464238 + (CAAAA)n Simple_repeat Simple_repeat 1 21 0 25 65 0 0 chr2 52224432 52224478 -198463376 + AT_rich Low_complexity Low_complexity 1 46 0 4526 151 57 17 chr2 52224508 52225340 -198462514 - MER6 DNA MER2_type 0 865 1 2342 162 43 32 chr2 52225701 52226232 -198461622 - L1MA8 LINE L1 -3 6288 5752 1102 216 24 0 chr2 52227903 52228116 -198459738 + MER20 DNA MER1_type 1 218 -1 2450 114 8 0 chr2 52228173 52228533 -198459321 - THE1B LTR MaLR 0 364 2 22 0 0 0 chr2 52229403 52229425 -198458429 + AT_rich Low_complexity Low_complexity 1 22 0 1170 234 62 0 chr2 52231779 52232100 -198455754 + MER58B DNA MER1_type 1 341 0 405 258 141 62 chr2 52232344 52232600 -198455254 - MARNA DNA Mariner -26 560 285 188 173 39 39 chr2 52232608 52232660 -198455194 + L2 LINE L2 3258 3309 -4 242 281 187 89 chr2 52234186 52234389 -198453465 - L2 LINE L2 -50 3222 3000 463 191 42 0 chr2 52236071 52236214 -198451640 - L1PB4 LINE L1 -12 6144 5930 267 31 0 0 chr2 52236214 52236246 -198451608 + (TTA)n Simple_repeat Simple_repeat 1 32 0 1032 221 23 18 chr2 52236246 52236463 -198451391 - AluJo SINE Alu -94 218 1 1132 131 35 20 chr2 52236463 52236566 -198451288 - L1PB4 LINE L1 -221 5935 5835 2138 110 3 28 chr2 52236566 52236884 -198450970 - AluSg SINE Alu 0 310 1 1132 131 35 20 chr2 52236884 52236979 -198450875 - L1PB4 LINE L1 -321 5835 5734 190 296 83 46 chr2 52237075 52237183 -198450671 - MIR SINE MIR -70 192 81 21 0 0 0 chr2 52237395 52237416 -198450438 + AT_rich Low_complexity Low_complexity 1 21 0 187 349 120 38 chr2 52237455 52237664 -198450190 - L2 LINE L2 -212 3101 2876 35 41 0 0 chr2 52237738 52237787 -198450067 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr2 52239104 52239125 -198448729 + AT_rich Low_complexity Low_complexity 1 21 0 851 285 116 33 chr2 52240148 52240393 -198447461 + MLT1J LTR MaLR 1 224 -287 2128 117 0 0 chr2 52240393 52240691 -198447163 - AluSx SINE Alu -14 298 1 851 285 116 33 chr2 52240691 52240869 -198446985 + MLT1J LTR MaLR 224 459 -52 487 258 211 24 chr2 52240906 52241115 -198446739 - MIR SINE MIR 0 262 15 21 0 0 0 chr2 52241738 52241759 -198446095 + AT_rich Low_complexity Low_complexity 1 21 0 366 123 0 0 chr2 52242608 52242665 -198445189 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 1965 104 4 0 chr2 52244508 52244778 -198443076 + AluSg SINE Alu 3 273 -37 2243 101 3 0 chr2 52246679 52246977 -198440877 - AluSg SINE Alu -11 299 1 1108 182 50 86 chr2 52247658 52248020 -198439834 - L1MA9 LINE L1 -33 6279 5931 1102 180 9 95 chr2 52248021 52248338 -198439516 - AluJo SINE Alu -11 301 12 523 185 65 0 chr2 52248358 52248466 -198439388 - L1MA9 LINE L1 -348 5943 5829 449 300 79 46 chr2 52248473 52248713 -198439141 + MIR SINE MIR 10 257 -5 252 266 257 9 chr2 52249030 52249143 -198438711 + MIR3 SINE MIR 38 178 -30 287 239 34 34 chr2 52254542 52254630 -198433224 + MIR3 SINE MIR 92 179 -29 400 281 93 31 chr2 52256805 52257424 -198430430 + L1ME3A LINE L1 1065 1745 -4565 981 261 88 33 chr2 52257778 52258415 -198429439 + L1ME3A LINE L1 5245 5934 -219 446 0 0 18 chr2 52259979 52260034 -198427820 + (TA)n Simple_repeat Simple_repeat 2 55 0 22 0 0 0 chr2 52261496 52261518 -198426336 + AT_rich Low_complexity Low_complexity 1 22 0 240 344 84 23 chr2 52261536 52261667 -198426187 - MIR SINE MIR -5 257 119 864 225 11 5 chr2 52262886 52263073 -198424781 - MER5A DNA MER1_type -1 188 1 248 184 20 0 chr2 52263144 52263193 -198424661 + L2 LINE L2 3264 3313 0 198 0 0 0 chr2 52263271 52263293 -198424561 + (TA)n Simple_repeat Simple_repeat 1 22 0 242 372 154 4 chr2 52263845 52264079 -198423775 - L2 LINE L2 -650 2664 2396 405 269 15 30 chr2 52264089 52264223 -198423631 + MER69 DNA AcHobo 2 133 -2393 1285 57 6 0 chr2 52264226 52264409 -198423445 - AluY SINE Alu 0 316 133 261 241 13 38 chr2 52264444 52264523 -198423331 + MER69 DNA AcHobo 172 248 -978 * 271 244 44 22 chr2 52264517 52264607 -198423247 + MER69 DNA AcHobo 2435 2526 0 207 347 69 46 chr2 52264742 52265004 -198422850 - L2 LINE L2 -1112 2202 1935 224 281 263 21 chr2 52265201 52265331 -198422523 - MIR3 SINE MIR -97 111 6 1896 264 57 19 chr2 52266570 52267255 -198420599 + L1ME2 LINE L1 5451 6161 -3 243 88 0 0 chr2 52267307 52267341 -198420513 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 2121 120 10 0 chr2 52267348 52267649 -198420205 - AluSx SINE Alu -8 304 1 1410 109 59 14 chr2 52267809 52268029 -198419825 - MER30 DNA MER1_type 0 230 1 2016 129 7 10 chr2 52268155 52268458 -198419396 + AluSg SINE Alu 1 302 -8 425 246 99 44 chr2 52268730 52269055 -198418799 + L1ME4a LINE L1 5106 5441 -748 360 0 0 0 chr2 52269279 52269319 -198418535 + (TG)n Simple_repeat Simple_repeat 2 41 0 * 513 0 0 0 chr2 52269318 52269375 -198418479 + (TA)n Simple_repeat Simple_repeat 1 57 0 2059 138 0 0 chr2 52269375 52269672 -198418182 - AluSg SINE Alu -13 297 1 269 301 142 25 chr2 52269690 52270015 -198417839 + L1ME4a LINE L1 5728 6090 -31 493 324 16 27 chr2 52271554 52271739 -198416115 + MER5A DNA MER1_type 4 186 -3 243 280 42 77 chr2 52272893 52273061 -198414793 + MIR SINE MIR 14 175 -87 232 189 0 57 chr2 52273773 52273826 -198414028 + LTR16B LTR ERVL 105 154 -310 213 94 0 0 chr2 52273893 52273925 -198413929 + (TA)n Simple_repeat Simple_repeat 2 33 0 211 182 0 0 chr2 52273953 52273986 -198413868 + (CA)n Simple_repeat Simple_repeat 2 34 0 253 252 206 8 chr2 52275666 52275797 -198412057 - MIR SINE MIR -31 231 75 183 235 0 0 chr2 52276736 52276770 -198411084 + MIR SINE MIR 1 34 -228 2327 96 3 6 chr2 52276771 52277085 -198410769 - AluSp SINE Alu 0 313 1 876 272 26 4 chr2 52277085 52277313 -198410541 + MIR SINE MIR 20 252 -10 34 84 0 0 chr2 52277458 52277541 -198410313 + AT_rich Low_complexity Low_complexity 1 83 0 252 320 94 8 chr2 52279758 52279886 -198407968 + MIR SINE MIR 69 207 -55 261 159 0 0 chr2 52280369 52280413 -198407441 - L3b LINE CR1 -12 1571 1528 377 311 16 33 chr2 52280814 52280936 -198406918 + MIR3 SINE MIR 37 156 -52 346 293 26 26 chr2 52280934 52281050 -198406804 - MIR SINE MIR -60 148 33 * 226 304 205 18 chr2 52281114 52281285 -198406569 - MIR SINE MIR -15 247 45 282 29 0 0 chr2 52286572 52286607 -198401247 + (CCG)n Simple_repeat Simple_repeat 1 35 0 219 139 0 0 chr2 52287432 52287468 -198400386 + (A)n Simple_repeat Simple_repeat 1 36 0 236 346 59 44 chr2 52289205 52289341 -198398513 + MIR3 SINE MIR 5 142 -66 2590 211 58 9 chr2 52289699 52290268 -198397586 + MER82 DNA MER2_type 1 597 -56 360 194 139 9 chr2 52291353 52291461 -198396393 - MIR SINE MIR 0 262 141 22 0 0 0 chr2 52292192 52292214 -198395640 + AT_rich Low_complexity Low_complexity 1 22 0 422 0 0 36 chr2 52292455 52292510 -198395344 + (TAA)n Simple_repeat Simple_repeat 3 55 0 289 338 90 8 chr2 52293137 52293270 -198394584 + MIR SINE MIR 6 149 -113 593 191 93 68 chr2 52293525 52293687 -198394167 - MER5A DNA MER1_type -2 187 22 703 227 141 30 chr2 52294011 52294209 -198393645 + MIR SINE MIR 13 232 -30 312 27 0 0 chr2 52294252 52294289 -198393565 + (TA)n Simple_repeat Simple_repeat 1 37 0 379 100 29 0 chr2 52294935 52295005 -198392849 + (TA)n Simple_repeat Simple_repeat 2 73 0 219 292 40 82 chr2 52295085 52295333 -198392521 + L2 LINE L2 2755 2985 -287 1100 234 64 14 chr2 52296699 52296981 -198390873 + AluJo SINE Alu 3 298 -4 2262 99 3 0 chr2 52296987 52297307 -198390547 - AluSp SINE Alu 0 323 3 24390 113 12 50 chr2 52297485 52303951 -198383903 + L1PA7 LINE L1 9 6150 -4 216 179 0 0 chr2 52304649 52304688 -198383166 + A-rich Low_complexity Low_complexity 2 40 0 23 33 0 0 chr2 52305932 52305962 -198381892 + AT_rich Low_complexity Low_complexity 1 30 0 427 311 47 27 chr2 52306413 52306679 -198381175 + MLT1J LTR MaLR 242 615 0 306 261 0 0 chr2 52307165 52307230 -198380624 - L2 LINE L2 0 3313 3249 460 300 172 47 chr2 52308001 52308537 -198379317 + L3 LINE CR1 792 1394 -183 207 343 14 29 chr2 52310031 52310101 -198377753 - MER5A DNA MER1_type -87 102 34 191 239 22 0 chr2 52310113 52310159 -198377695 + L2 LINE L2 3215 3261 -11 28 48 0 0 chr2 52311468 52311510 -198376344 + AT_rich Low_complexity Low_complexity 1 42 0 482 300 140 51 chr2 52311510 52311960 -198375894 - L3 LINE CR1 -35 1542 1053 342 0 0 0 chr2 52312997 52313035 -198374819 + (TTA)n Simple_repeat Simple_repeat 2 39 0 954 68 20 7 chr2 52313285 52313433 -198374421 + (GAAA)n Simple_repeat Simple_repeat 1 150 0 1421 160 62 29 chr2 52313720 52314044 -198373810 + AluJo SINE Alu 1 333 0 486 311 54 29 chr2 52314987 52315228 -198372626 - MIR SINE MIR -13 249 3 225 178 0 0 chr2 52315729 52315774 -198372080 + (CATA)n Simple_repeat Simple_repeat 4 48 0 236 274 29 78 chr2 52316471 52316573 -198371281 - MIR3 SINE MIR -7 201 105 273 119 0 0 chr2 52316632 52316674 -198371180 + (TTTTC)n Simple_repeat Simple_repeat 2 43 0 327 226 20 0 chr2 52316689 52316791 -198371063 - L1M LINE L1 -758 5420 5317 3027 107 9 7 chr2 52316803 52317243 -198370611 - L1PA10 LINE L1 -13 6155 5715 1460 190 66 11 chr2 52317997 52318343 -198369511 - MER47B DNA MER2_type 0 418 1 366 297 40 0 chr2 52318676 52318777 -198369077 + L2 LINE L2 3209 3313 0 209 264 19 0 chr2 52318801 52318854 -198369000 + GA-rich Low_complexity Low_complexity 2 55 0 186 43 0 0 chr2 52319241 52319264 -198368590 + (GA)n Simple_repeat Simple_repeat 2 24 0 276 30 0 0 chr2 52319979 52320012 -198367842 + (TG)n Simple_repeat Simple_repeat 2 34 0 494 285 192 5 chr2 52320188 52320402 -198367452 + MIR SINE MIR 6 259 -3 187 318 0 45 chr2 52320563 52320629 -198367225 - L2 LINE L2 -11 3302 3240 264 339 183 0 chr2 52320721 52320836 -198367018 + L2 LINE L2 3137 3272 0 459 0 0 0 chr2 52321225 52321276 -198366578 + (CA)n Simple_repeat Simple_repeat 2 52 0 602 75 0 0 chr2 52321367 52321447 -198366407 + MADE1 DNA Mariner 1 80 0 574 133 0 0 chr2 52323170 52323260 -198364594 - L1MA6 LINE L1 0 6300 6211 236 350 104 33 chr2 52323341 52323524 -198364330 + MIR3 SINE MIR 13 208 0 2337 106 0 6 chr2 52323927 52324238 -198363616 + AluSc SINE Alu 1 309 0 316 263 0 13 chr2 52325445 52325521 -198362333 + L3 LINE CR1 630 704 -873 28 0 0 0 chr2 52325575 52325603 -198362251 + AT_rich Low_complexity Low_complexity 1 28 0 259 250 0 12 chr2 52325693 52325777 -198362077 + (TA)n Simple_repeat Simple_repeat 1 83 0 445 304 5 49 chr2 52325939 52326123 -198361731 + L3 LINE CR1 803 978 -599 1071 185 18 22 chr2 52328672 52328899 -198358955 + AluJb SINE Alu 86 311 -1 1844 168 66 31 chr2 52330245 52330626 -198357228 + MSTD LTR MaLR 1 394 -2 458 239 0 0 chr2 52332540 52332628 -198355226 + FLAM_A SINE Alu 1 88 -54 22 0 0 0 chr2 52332868 52332890 -198354964 + AT_rich Low_complexity Low_complexity 1 22 0 1837 307 92 36 chr2 52333678 52334952 -198352902 + L2 LINE L2 1964 3313 0 463 294 102 25 chr2 52335333 52335530 -198352324 - MIR SINE MIR -1 261 50 251 239 84 0 chr2 52337137 52337208 -198350646 - MIR SINE MIR -57 205 129 197 162 0 0 chr2 52337210 52337247 -198350607 - MIR SINE MIR -99 163 127 585 0 0 0 chr2 52339493 52339558 -198348296 + (A)n Simple_repeat Simple_repeat 1 65 0 29 0 0 0 chr2 52339587 52339616 -198348238 + AT_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chr2 52341444 52341464 -198346390 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 551 247 160 20 chr2 52343017 52343167 -198344687 + MER5A DNA MER1_type 18 188 -1 247 25 50 0 chr2 52343871 52343911 -198343943 + (TTG)n Simple_repeat Simple_repeat 1 42 0 228 327 135 10 chr2 52345371 52345475 -198342379 + MIR3 SINE MIR 2 118 -90 765 312 13 9 chr2 52345539 52345770 -198342084 - MIR SINE MIR 0 262 31 24 67 0 0 chr2 52346792 52346837 -198341017 + AT_rich Low_complexity Low_complexity 1 45 0 2600 134 39 12 chr2 52347180 52347590 -198340264 + MSTC LTR MaLR 3 423 -5 309 301 257 5 chr2 52348013 52348219 -198339635 - MIR SINE MIR -2 260 3 243 133 0 0 chr2 52348353 52348398 -198339456 + (TG)n Simple_repeat Simple_repeat 2 46 0 342 0 0 0 chr2 52348543 52348581 -198339273 + (TC)n Simple_repeat Simple_repeat 1 38 0 211 286 33 33 chr2 52349670 52349761 -198338093 + L2 LINE L2 2811 2901 -371 213 39 0 0 chr2 52350285 52350311 -198337543 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 33 0 0 23 chr2 52350719 52350732 -198337122 + AT_rich Low_complexity Low_complexity 1 13 -30 9615 73 60 4 chr2 52350732 52352038 -198335816 + SVA Other Other 8 1386 0 33 0 0 23 chr2 52352038 52352068 -198335786 + AT_rich Low_complexity Low_complexity 13 43 0 21 0 0 0 chr2 52352365 52352386 -198335468 + AT_rich Low_complexity Low_complexity 1 21 0 2640 173 3 10 chr2 52352474 52353070 -198334784 + L1 LINE L1 4833 5422 -743 6403 81 25 29 chr2 52353071 52354034 -198333820 + L1MA1 LINE L1 5336 6294 -8 236 111 0 0 chr2 52354126 52354171 -198333683 + L1MA3 LINE L1 6256 6300 -5 712 309 50 30 chr2 52355698 52356035 -198331819 - L2 LINE L2 0 3313 2970 2531 96 22 0 chr2 52356245 52356608 -198331246 - THE1C LTR MaLR 0 375 5 340 323 68 65 chr2 52357224 52357472 -198330382 - L2 LINE L2 -32 3240 2992 202 356 0 0 chr2 52357677 52357736 -198330118 - L2 LINE L2 -566 2748 2690 24 0 0 0 chr2 52358511 52358535 -198329319 + AT_rich Low_complexity Low_complexity 1 24 0 315 256 12 12 chr2 52359269 52359355 -198328499 + GA-rich Low_complexity Low_complexity 1 86 0 342 115 0 0 chr2 52360085 52360137 -198327717 + (CA)n Simple_repeat Simple_repeat 2 53 0 328 312 32 8 chr2 52360517 52360642 -198327212 + MER94 DNA DNA 1 128 -6 513 0 0 0 chr2 52360667 52360724 -198327130 + (TG)n Simple_repeat Simple_repeat 2 58 0 21 0 0 0 chr2 52361606 52361627 -198326227 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 52362107 52362128 -198325726 + AT_rich Low_complexity Low_complexity 1 21 0 524 297 140 29 chr2 52363293 52363643 -198324211 - L2 LINE L2 -4 3309 2921 222 230 220 20 chr2 52363697 52363797 -198324057 - L2 LINE L2 -479 2835 2716 595 138 9 9 chr2 52363816 52363932 -198323922 + GA-rich Low_complexity Low_complexity 3 118 0 342 203 0 0 chr2 52364071 52364199 -198323655 + G-rich Low_complexity Low_complexity 1 128 0 734 136 0 22 chr2 52364200 52364384 -198323470 + (G)n Simple_repeat Simple_repeat 1 180 0 297 268 21 35 chr2 52364384 52364600 -198323254 + G-rich Low_complexity Low_complexity 1 212 0 243 341 147 28 chr2 52364835 52365046 -198322808 + MIR SINE MIR 27 262 0 973 231 59 12 chr2 52366276 52366532 -198321322 - MLT1C LTR MaLR 0 467 200 22 35 0 0 chr2 52367288 52367317 -198320537 + AT_rich Low_complexity Low_complexity 1 29 0 656 221 0 0 chr2 52367328 52367464 -198320390 + FLAM_C SINE Alu 4 139 -4 306 154 39 13 chr2 52368086 52368164 -198319690 + MER116 DNA Mariner 1 80 0 922 215 21 34 chr2 52368418 52368655 -198319199 - AluJo SINE Alu -19 293 60 255 103 0 0 chr2 52368859 52368898 -198318956 + (CA)n Simple_repeat Simple_repeat 1 39 0 23 33 0 0 chr2 52368942 52368972 -198318882 + AT_rich Low_complexity Low_complexity 1 30 0 511 110 0 22 chr2 52370673 52370764 -198317090 + (GGA)n Simple_repeat Simple_repeat 2 90 0 1782 159 3 7 chr2 52374548 52374843 -198313011 + AluJo SINE Alu 1 294 -18 367 226 139 29 chr2 52375176 52375313 -198312541 - MIR SINE MIR -43 219 68 2129 132 0 0 chr2 52375673 52375968 -198311886 - AluSx SINE Alu -12 300 6 839 166 95 6 chr2 52376783 52376952 -198310902 + MER3 DNA MER1_type 1 184 -25 981 233 41 96 chr2 52377888 52378231 -198309623 + MER58B DNA MER1_type 18 341 0 320 314 109 6 chr2 52378319 52378475 -198309379 - MIR SINE MIR -3 259 88 434 325 13 0 chr2 52379561 52379715 -198308139 + MLT1L LTR MaLR 437 592 -23 21 0 0 0 chr2 52379974 52379995 -198307859 + AT_rich Low_complexity Low_complexity 1 21 0 342 243 0 0 chr2 52380093 52380196 -198307658 + GA-rich Low_complexity Low_complexity 2 104 0 2319 50 0 77 chr2 52380461 52380798 -198307056 - AluY SINE Alu 0 311 1 21 36 0 0 chr2 52381072 52381100 -198306754 + AT_rich Low_complexity Low_complexity 1 28 0 234 236 182 49 chr2 52381560 52381738 -198306116 + MIR3 SINE MIR 12 204 -58 22 0 0 0 chr2 52381758 52381780 -198306074 + AT_rich Low_complexity Low_complexity 1 22 0 1687 121 0 0 chr2 52381906 52382145 -198305709 - L1P4 LINE L1 -356 5809 5571 1710 111 4 0 chr2 52382145 52382391 -198305463 + L1PA15 LINE L1 5912 6165 0 212 303 13 0 chr2 52382393 52382469 -198305385 - MIR3 SINE MIR -45 163 87 2178 103 7 3 chr2 52382588 52382888 -198304966 + AluSp SINE Alu 1 301 -12 198 0 0 0 chr2 52384125 52384147 -198303707 + (TG)n Simple_repeat Simple_repeat 1 22 0 2446 63 0 35 chr2 52385941 52386256 -198301598 + AluY SINE Alu 1 304 -7 207 0 0 0 chr2 52386818 52386841 -198301013 + (TTA)n Simple_repeat Simple_repeat 2 24 0 386 329 110 14 chr2 52386843 52387062 -198300792 - L2 LINE L2 -63 3250 3011 25 0 0 0 chr2 52387750 52387775 -198300079 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 52387820 52387841 -198300013 + AT_rich Low_complexity Low_complexity 1 21 0 657 250 34 0 chr2 52388501 52388649 -198299205 + MIR SINE MIR 8 160 -102 957 321 112 40 chr2 52388855 52389698 -198298156 - L2 LINE L2 -858 2456 1554 345 322 20 27 chr2 52389932 52390078 -198297776 + MIR3 SINE MIR 9 153 -55 1816 158 40 44 chr2 52390998 52391403 -198296451 - MER96B DNA MER1_type? -3 414 12 210 263 40 79 chr2 52391960 52392036 -198295818 + L2 LINE L2 3182 3254 -59 289 238 116 138 chr2 52392509 52392690 -198295164 - MER91B DNA MER1_type -13 177 1 265 246 0 18 chr2 52392735 52392845 -198295009 + CT-rich Low_complexity Low_complexity 2 109 0 * 926 113 5 38 chr2 52392825 52393011 -198294843 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 252 176 121 11 chr2 52393161 52393252 -198294602 + L1ME4a LINE L1 6020 6120 -1 2198 122 0 19 chr2 52393610 52393922 -198293932 + AluSx SINE Alu 3 308 -4 195 42 0 0 chr2 52393962 52393986 -198293868 + (TA)n Simple_repeat Simple_repeat 2 25 0 378 0 0 0 chr2 52394154 52394196 -198293658 + (TA)n Simple_repeat Simple_repeat 1 42 0 30 27 0 0 chr2 52395276 52395313 -198292541 + AT_rich Low_complexity Low_complexity 1 37 0 223 269 0 45 chr2 52395785 52395852 -198292002 + L2 LINE L2 3021 3084 -188 448 223 159 38 chr2 52395877 52396034 -198291820 - MER5A DNA MER1_type 0 189 14 367 88 18 0 chr2 52396037 52396094 -198291760 - L1PA16 LINE L1 -9 6157 6100 526 296 31 6 chr2 52396284 52396443 -198291411 - MIR SINE MIR -74 188 26 290 301 0 73 chr2 52396766 52396889 -198290965 - L2 LINE L2 0 3313 3200 199 337 139 10 chr2 52396897 52396998 -198290856 + L2 LINE L2 3182 3295 -18 1580 168 47 7 chr2 52397411 52397685 -198290169 - AluJb SINE Alu -27 285 1 456 237 35 0 chr2 52398796 52398910 -198288944 - MIR3 SINE MIR -8 200 83 715 274 11 5 chr2 52399604 52399790 -198288064 - MER5A DNA MER1_type -1 188 2 1976 125 7 0 chr2 52400462 52400766 -198287088 + AluSx SINE Alu 1 306 0 360 0 0 0 chr2 52401081 52401121 -198286733 + (CA)n Simple_repeat Simple_repeat 1 40 0 220 375 62 0 chr2 52403820 52403916 -198283938 + MIR SINE MIR 20 121 -141 5092 151 60 36 chr2 52403916 52404999 -198282855 + L1MA4 LINE L1 5182 6291 -9 2116 125 7 7 chr2 52404999 52405295 -198282559 - AluSq SINE Alu -16 297 2 28 48 0 0 chr2 52405561 52405603 -198282251 + AT_rich Low_complexity Low_complexity 1 42 0 2575 146 14 5 chr2 52405727 52406167 -198281687 - L1PA14 LINE L1 -3 6158 5715 249 185 37 0 chr2 52408031 52408085 -198279769 + MIR SINE MIR 195 250 -12 225 196 0 0 chr2 52414070 52414126 -198273728 + (TAA)n Simple_repeat Simple_repeat 1 56 0 445 300 67 0 chr2 52415112 52415262 -198272592 + MIR SINE MIR 47 206 -56 859 256 6 6 chr2 52415488 52415660 -198272194 + MER5A DNA MER1_type 11 182 -7 23 0 0 0 chr2 52416593 52416616 -198271238 + AT_rich Low_complexity Low_complexity 1 23 0 2939 155 2 4 chr2 52417521 52418017 -198269837 - L1PB3 LINE L1 0 6154 5660 1917 122 0 3 chr2 52418019 52418315 -198269539 + L1PA13 LINE L1 5865 6159 -4 321 26 0 0 chr2 52418435 52418473 -198269381 + (CAAAAA)n Simple_repeat Simple_repeat 1 38 0 22 56 0 0 chr2 52418972 52419008 -198268846 + AT_rich Low_complexity Low_complexity 1 36 0 325 359 35 18 chr2 52419167 52419212 -198268642 + MIR SINE MIR 47 90 -172 315 0 0 0 chr2 52419212 52419247 -198268607 + (TG)n Simple_repeat Simple_repeat 2 36 0 325 359 35 18 chr2 52419247 52419371 -198268483 + MIR SINE MIR 90 219 -43 717 306 79 0 chr2 52420065 52420281 -198267573 + LTR40a LTR ERVL 263 495 -24 190 310 150 20 chr2 52420294 52420394 -198267460 - MIR SINE MIR -57 151 39 207 0 0 0 chr2 52421100 52421123 -198266731 + (A)n Simple_repeat Simple_repeat 1 23 0 530 272 49 49 chr2 52422719 52422952 -198264902 + MIR SINE MIR 8 233 -29 2366 103 3 0 chr2 52426178 52426489 -198261365 - AluSx SINE Alu 0 312 1 2800 6 0 10 chr2 52428173 52428484 -198259370 - AluYa5 SINE Alu -3 308 1 1142 125 10 26 chr2 52429041 52429233 -198258621 + MER41B LTR ERV1 3 191 -444 377 102 0 6 chr2 52429233 52429288 -198258566 + AluJ/FLAM SINE Alu 4 52 -250 1547 89 0 0 chr2 52429288 52429490 -198258364 + AluSg/x SINE Alu 102 303 -7 2840 136 0 16 chr2 52429499 52429947 -198257907 + MER41B LTR ERV1 195 635 0 349 331 40 57 chr2 52429949 52430124 -198257730 - MIR SINE MIR -56 206 35 446 297 52 19 chr2 52431430 52431585 -198256269 + MIR SINE MIR 47 206 -56 29 0 0 0 chr2 52432432 52432461 -198255393 + AT_rich Low_complexity Low_complexity 1 29 0 337 259 36 45 chr2 52433454 52433566 -198254288 + MIR SINE MIR 94 204 -58 210 71 0 0 chr2 52433603 52433631 -198254223 + (ATGGTG)n Simple_repeat Simple_repeat 5 32 0 251 337 10 10 chr2 52433632 52433730 -198254124 - MIR SINE MIR -160 102 5 253 262 65 37 chr2 52435948 52436055 -198251799 + MIR3 SINE MIR 93 202 -6 190 295 141 13 chr2 52438363 52438441 -198249413 + MIR SINE MIR 169 256 -6 215 302 28 72 chr2 52439328 52439481 -198248373 - MER5B DNA MER1_type -44 134 3 2168 114 7 0 chr2 52441167 52441465 -198246389 + AluSx SINE Alu 1 300 -12 635 0 13 0 chr2 52441762 52441837 -198246017 + (TG)n Simple_repeat Simple_repeat 2 77 0 223 337 65 12 chr2 52445250 52445419 -198242435 - L3 LINE CR1 -817 760 583 2464 68 0 0 chr2 52446090 52446383 -198241471 + AluSx SINE Alu 9 301 -11 215 379 53 23 chr2 52447279 52447411 -198240443 - L2 LINE L2 -1 3271 3136 360 43 0 0 chr2 52447797 52447843 -198240011 + (TG)n Simple_repeat Simple_repeat 2 47 0 196 362 141 6 chr2 52447860 52448023 -198239831 - L2 LINE L2 -708 2606 2422 462 79 0 0 chr2 52448607 52448670 -198239184 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 312 111 0 0 chr2 52448860 52448914 -198238940 + (CA)n Simple_repeat Simple_repeat 2 55 0 2043 223 51 125 chr2 52448964 52449442 -198238412 + L1MC4 LINE L1 6397 6909 -1133 2160 151 0 0 chr2 52449442 52449754 -198238100 + AluSx SINE Alu 1 312 0 2043 223 51 125 chr2 52449754 52450973 -198236881 + L1MC4 LINE L1 6909 8039 -3 236 276 0 26 chr2 52451707 52451783 -198236071 + MIR SINE MIR 97 170 -92 285 198 33 0 chr2 52453096 52453187 -198234667 + GA-rich Low_complexity Low_complexity 2 95 0 180 0 0 0 chr2 52454053 52454073 -198233781 + (A)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr2 52454102 52454123 -198233731 + AT_rich Low_complexity Low_complexity 1 21 0 208 308 0 13 chr2 52454377 52454455 -198233399 + GA-rich Low_complexity Low_complexity 2 78 0 281 259 22 86 chr2 52455491 52455630 -198232224 - MIR SINE MIR -68 140 11 180 340 93 10 chr2 52455633 52455730 -198232124 + MIR3 SINE MIR 79 183 -25 231 330 22 11 chr2 52455919 52456010 -198231844 + MIR3 SINE MIR 102 193 -15 1384 203 58 39 chr2 52456218 52456582 -198231272 + MLT1A2 LTR MaLR 4 374 0 2264 110 0 0 chr2 52456622 52456930 -198230924 + AluSg SINE Alu 1 308 -2 299 305 133 20 chr2 52457314 52457465 -198230389 - MIR3 SINE MIR -10 198 31 1831 133 23 23 chr2 52457473 52457773 -198230081 - AluSg SINE Alu -10 300 1 183 129 0 0 chr2 52458163 52458194 -198229660 + (TG)n Simple_repeat Simple_repeat 1 31 0 291 327 50 0 chr2 52458375 52458476 -198229378 + MIR SINE MIR 39 144 -64 453 317 55 15 chr2 52459420 52459622 -198228232 + MIR SINE MIR 47 256 -6 180 337 233 0 chr2 52460870 52460956 -198226898 - L2 LINE L2 -20 3293 3188 802 263 27 0 chr2 52460958 52461144 -198226710 - MER58A DNA MER1_type 0 224 34 195 333 20 0 chr2 52461261 52461312 -198226542 + MIR SINE MIR 42 93 -115 3007 161 34 0 chr2 52461396 52461904 -198225950 + MER1A DNA MER1_type 3 527 0 378 0 0 0 chr2 52462017 52462059 -198225795 + (TG)n Simple_repeat Simple_repeat 2 43 0 597 254 71 24 chr2 52462604 52462773 -198225081 - MER45A DNA AcHobo 0 178 2 409 242 21 0 chr2 52463430 52463525 -198224329 + MIR SINE MIR 40 136 -126 240 240 0 0 chr2 52463753 52463803 -198224051 + L2 LINE L2 3216 3265 -7 22 0 0 0 chr2 52465065 52465087 -198222767 + AT_rich Low_complexity Low_complexity 1 22 0 321 301 0 11 chr2 52468429 52468522 -198219332 + GA-rich Low_complexity Low_complexity 1 92 0 2271 92 3 10 chr2 52469137 52469451 -198218403 - AluSx SINE Alu 0 312 1 2009 129 0 0 chr2 52470616 52470940 -198216914 + AluSx SINE Alu 4 327 0 22 35 0 0 chr2 52473893 52473922 -198213932 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr2 52473966 52474002 -198213852 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 52476854 52476875 -198210979 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 52477460 52477486 -198210368 + AT_rich Low_complexity Low_complexity 1 26 0 1233 180 22 22 chr2 52478262 52478529 -198209325 - AluJo SINE Alu -8 304 38 263 320 70 16 chr2 52478585 52478713 -198209141 + MIR3 SINE MIR 71 205 -3 604 278 132 88 chr2 52479552 52480066 -198207788 + L2 LINE L2 2110 2646 -668 534 306 211 31 chr2 52480073 52480513 -198207341 + L2 LINE L2 2794 3311 -2 339 25 0 0 chr2 52480516 52480556 -198207298 + (CA)n Simple_repeat Simple_repeat 1 40 0 25 75 0 0 chr2 52482281 52482334 -198205520 + AT_rich Low_complexity Low_complexity 1 53 0 22 35 0 0 chr2 52483447 52483476 -198204378 + AT_rich Low_complexity Low_complexity 1 29 0 479 294 119 15 chr2 52485516 52485717 -198202137 + MIR SINE MIR 40 261 -1 1948 163 3 0 chr2 52487077 52487378 -198200476 - AluSx SINE Alu -10 302 1 189 196 0 0 chr2 52487572 52487618 -198200236 + (TA)n Simple_repeat Simple_repeat 2 47 0 239 283 73 45 chr2 52488122 52488299 -198199555 + MER112 DNA MER1_type 68 249 -11 2294 82 3 0 chr2 52488416 52488709 -198199145 + AluSp SINE Alu 1 294 -19 205 293 0 0 chr2 52488709 52488767 -198199087 + GA-rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr2 52489098 52489120 -198198734 + AT_rich Low_complexity Low_complexity 1 22 0 231 333 34 17 chr2 52490346 52490463 -198197391 + MIR3 SINE MIR 59 177 -31 29 28 0 0 chr2 52490697 52490733 -198197121 + AT_rich Low_complexity Low_complexity 1 36 0 453 315 79 12 chr2 52490933 52491196 -198196658 + L1ME4a LINE L1 5401 5675 -2133 207 266 43 11 chr2 52491613 52491707 -198196147 + (CATATA)n Simple_repeat Simple_repeat 3 99 0 1791 174 50 3 chr2 52492171 52492492 -198195362 + MER2 DNA MER2_type 5 340 -4 22 35 0 0 chr2 52493088 52493117 -198194737 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr2 52493715 52493738 -198194116 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 183 42 0 0 chr2 52494944 52494968 -198192886 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 199 303 30 0 chr2 52495032 52495098 -198192756 - L2 LINE L2 -14 3258 3191 23 33 0 0 chr2 52495699 52495729 -198192125 + AT_rich Low_complexity Low_complexity 1 30 0 224 133 44 0 chr2 52496306 52496351 -198191503 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 352 227 99 41 chr2 52496366 52496538 -198191316 + L1ME4a LINE L1 5936 6117 -4 682 150 0 0 chr2 52496639 52496752 -198191102 - AluJb SINE Alu -8 304 192 2258 78 10 3 chr2 52497090 52497397 -198190457 - AluY SINE Alu -2 309 1 749 157 0 7 chr2 52497414 52497554 -198190300 + GA-rich Low_complexity Low_complexity 3 141 0 338 195 11 0 chr2 52498156 52498243 -198189611 + CT-rich Low_complexity Low_complexity 1 88 0 22 0 0 0 chr2 52499808 52499830 -198188024 + AT_rich Low_complexity Low_complexity 1 22 0 192 152 0 0 chr2 52500571 52500604 -198187250 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 370 274 145 86 chr2 52500803 52501037 -198186817 + MIR SINE MIR 10 257 -5 222 364 0 27 chr2 52501302 52501412 -198186442 + L3b LINE CR1 1305 1411 -172 319 214 116 80 chr2 52501941 52502053 -198185801 + L2 LINE L2 3186 3301 -12 497 340 60 9 chr2 52503899 52504131 -198183723 + MIR SINE MIR 19 262 0 293 326 20 0 chr2 52504513 52504611 -198183243 - MIR SINE MIR -24 238 139 2125 59 0 75 chr2 52505194 52505501 -198182353 + AluY SINE Alu 1 309 0 226 0 0 0 chr2 52505501 52505526 -198182328 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 303 28 0 0 chr2 52506841 52506877 -198180977 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1514 132 40 0 chr2 52506883 52507111 -198180743 - AluSx SINE Alu -38 274 38 219 226 27 17 chr2 52507848 52507907 -198179947 - MIR SINE MIR -56 152 90 363 72 29 14 chr2 52508712 52508781 -198179073 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 21 0 0 0 chr2 52509144 52509165 -198178689 + AT_rich Low_complexity Low_complexity 1 21 0 234 366 37 15 chr2 52510505 52510639 -198177215 + MIR SINE MIR 40 176 -86 32 26 0 0 chr2 52510922 52510961 -198176893 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 52512059 52512081 -198175773 + AT_rich Low_complexity Low_complexity 1 22 0 1927 118 3 43 chr2 52512666 52512971 -198174883 - AluSx SINE Alu -19 293 1 399 250 143 50 chr2 52513062 52513202 -198174652 - MIR SINE MIR -81 181 29 26 0 0 0 chr2 52513405 52513431 -198174423 + AT_rich Low_complexity Low_complexity 1 26 0 760 221 71 31 chr2 52513820 52514046 -198173808 + MER96B DNA MER1_type? 1 235 -182 235 238 238 0 chr2 52514233 52514317 -198173537 - MIR SINE MIR 0 262 159 281 280 67 0 chr2 52514434 52514509 -198173345 - MIR SINE MIR -168 94 15 6588 131 16 2 chr2 52514630 52515858 -198171996 + L1MA3 LINE L1 5062 6305 0 185 159 63 0 chr2 52515925 52515988 -198171866 + (TA)n Simple_repeat Simple_repeat 2 68 0 347 258 201 13 chr2 52518912 52519071 -198168783 - MIR SINE MIR 0 262 74 220 269 116 56 chr2 52519258 52519401 -198168453 + MIR SINE MIR 31 190 -72 1768 182 25 0 chr2 52519506 52519792 -198168062 + AluJb SINE Alu 3 295 -17 22 35 0 0 chr2 52519891 52519920 -198167934 + AT_rich Low_complexity Low_complexity 1 29 0 230 95 24 0 chr2 52520159 52520201 -198167653 + (TAA)n Simple_repeat Simple_repeat 2 44 0 1147 153 0 30 chr2 52520205 52520407 -198167447 - MER2 DNA MER2_type -134 211 16 365 327 58 0 chr2 52522111 52522215 -198165639 + L2 LINE L2 3163 3272 0 24 0 0 0 chr2 52522410 52522434 -198165420 + AT_rich Low_complexity Low_complexity 1 24 0 288 0 0 0 chr2 52524126 52524158 -198163696 + (CA)n Simple_repeat Simple_repeat 2 33 0 1138 186 36 54 chr2 52524815 52525094 -198162760 - L1MD2 LINE L1 -2 6357 6084 21 0 0 0 chr2 52525119 52525140 -198162714 + AT_rich Low_complexity Low_complexity 1 21 0 1372 204 78 3 chr2 52525796 52526080 -198161774 + AluJb SINE Alu 2 306 -6 22 0 0 0 chr2 52527642 52527664 -198160190 + AT_rich Low_complexity Low_complexity 1 22 0 230 315 14 14 chr2 52528220 52528293 -198159561 - MIR SINE MIR -89 119 47 977 184 195 4 chr2 52528665 52528921 -198158933 + AluSg1 SINE Alu 2 306 -3 276 338 85 68 chr2 52529406 52529467 -198158387 + L2 LINE L2 2915 2973 -299 1596 179 41 10 chr2 52529467 52529757 -198158097 - AluJo SINE Alu -12 300 2 276 338 85 68 chr2 52529757 52530047 -198157807 + L2 LINE L2 2973 3272 0 195 203 0 130 chr2 52530044 52530113 -198157741 - MIR SINE MIR -3 259 200 * 215 353 86 0 chr2 52530291 52530407 -198157447 + L2 LINE L2 3139 3264 -8 448 300 69 73 chr2 52531517 52531668 -198156186 + MIR SINE MIR 1 152 -110 1665 144 21 0 chr2 52531668 52531959 -198155895 + L1MB2 LINE L1 5873 6169 -2 448 300 69 73 chr2 52531959 52532067 -198155787 + MIR SINE MIR 152 259 -3 1064 342 87 13 chr2 52532395 52532955 -198154899 + L2 LINE L2 2713 3313 0 183 302 23 23 chr2 52533424 52533510 -198154344 + MIR SINE MIR 19 104 -104 207 283 0 17 chr2 52533550 52533610 -198154244 + MIR SINE MIR 95 153 -109 1844 164 0 0 chr2 52533619 52533911 -198153943 + AluJb SINE Alu 1 292 -20 340 298 48 16 chr2 52534504 52534628 -198153226 - MIR SINE MIR -125 137 10 241 250 0 0 chr2 52535018 52535074 -198152780 + MIR SINE MIR 97 152 -110 22 70 0 0 chr2 52535419 52535462 -198152392 + AT_rich Low_complexity Low_complexity 1 43 0 346 352 23 0 chr2 52536907 52537035 -198150819 - MIR SINE MIR -51 211 81 1775 101 66 4 chr2 52537042 52537300 -198150554 - AluSg SINE Alu -3 307 34 191 152 22 0 chr2 52537399 52537445 -198150409 + (TA)n Simple_repeat Simple_repeat 2 48 0 22 109 0 0 chr2 52538092 52538184 -198149670 + AT_rich Low_complexity Low_complexity 1 92 0 631 272 140 48 chr2 52539183 52539540 -198148314 - MLT1L LTR MaLR -158 457 68 501 276 77 19 chr2 52542112 52542268 -198145586 + MIR SINE MIR 8 172 -90 256 143 0 0 chr2 52542461 52542510 -198145344 - AluSp/q SINE Alu 0 303 255 1365 122 0 5 chr2 52542510 52542699 -198145155 - AluSx SINE Alu -122 190 3 378 336 81 86 chr2 52542742 52542859 -198144995 - L2 LINE L2 0 3272 3156 1989 128 44 49 chr2 52542859 52543225 -198144629 - THE1B LTR MaLR 0 364 1 378 336 81 86 chr2 52543225 52543817 -198144037 - L2 LINE L2 -116 3156 2556 190 306 0 0 chr2 52543904 52543953 -198143901 - L2 LINE L2 -1007 2307 2259 28 99 0 0 chr2 52544369 52544460 -198143394 + AT_rich Low_complexity Low_complexity 1 91 0 977 224 23 0 chr2 52545450 52545664 -198142190 - MER20 DNA MER1_type 0 219 1 420 341 58 12 chr2 52547933 52548106 -198139748 - MER5A DNA MER1_type -6 183 3 2501 55 0 3 chr2 52548704 52549016 -198138838 + AluY SINE Alu 1 311 0 337 360 33 37 chr2 52550162 52550404 -198137450 + MIR SINE MIR 1 241 -21 378 320 10 0 chr2 52551673 52551773 -198136081 + MER91B DNA MER1_type 90 190 0 186 260 123 55 chr2 52552293 52552366 -198135488 - MIR SINE MIR -10 252 175 688 286 38 5 chr2 52553007 52553192 -198134662 + MIR SINE MIR 61 251 -11 226 111 0 67 chr2 52553213 52553258 -198134596 - MIR SINE MIR -64 198 157 341 91 18 0 chr2 52553259 52553314 -198134540 - AluSg/x SINE Alu -113 187 132 262 241 0 0 chr2 52553317 52553371 -198134483 - MIR SINE MIR -105 157 104 202 319 134 34 chr2 52554436 52554555 -198133299 - MIR SINE MIR -55 153 23 354 323 0 0 chr2 52554646 52554745 -198133109 + L2 LINE L2 3193 3291 -22 185 65 32 0 chr2 52554745 52554776 -198133078 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 294 247 0 0 chr2 52554783 52554856 -198132998 - LTR30 LTR ERV1 -98 624 552 21 0 0 0 chr2 52554857 52554878 -198132976 + AT_rich Low_complexity Low_complexity 1 21 0 589 245 62 5 chr2 52557121 52557313 -198130541 - L1ME4a LINE L1 -202 5919 5717 255 221 97 156 chr2 52557766 52557920 -198129934 + MIR SINE MIR 50 194 -68 2156 100 0 14 chr2 52559964 52560285 -198127569 - AluSg SINE Alu 0 317 1 25 83 0 0 chr2 52560297 52560357 -198127497 + AT_rich Low_complexity Low_complexity 1 60 0 232 191 0 48 chr2 52560628 52560712 -198127142 + T-rich Low_complexity Low_complexity 6 85 0 282 290 0 0 chr2 52560794 52560856 -198126998 + polypurine Low_complexity Low_complexity 3 64 0 1400 190 37 88 chr2 52561683 52562057 -198125797 + MLT1A1 LTR MaLR 10 364 -1 236 304 78 52 chr2 52562635 52562750 -198125104 + L2 LINE L2 3196 3313 0 249 271 0 0 chr2 52563873 52563932 -198123922 - L2 LINE L2 -217 3055 2997 412 301 136 30 chr2 52564177 52564413 -198123441 - MIR SINE MIR 0 262 2 1902 174 0 3 chr2 52566341 52566646 -198121208 - AluSx SINE Alu -8 304 1 267 269 43 11 chr2 52567488 52567581 -198120273 + MIR SINE MIR 131 226 -36 1214 209 110 54 chr2 52567639 52568012 -198119842 - MSTD LTR MaLR -2 394 1 2314 118 0 0 chr2 52568043 52568347 -198119507 + AluSq SINE Alu 3 306 -7 213 382 125 7 chr2 52568352 52568504 -198119350 + MER5A DNA MER1_type 20 189 0 443 314 125 26 chr2 52570203 52570467 -198117387 + L2 LINE L2 3021 3310 -3 284 233 22 44 chr2 52574189 52574279 -198113575 - MIR SINE MIR -7 255 168 279 71 0 0 chr2 52574599 52574641 -198113213 + (TG)n Simple_repeat Simple_repeat 2 43 0 289 301 7 52 chr2 52574672 52574808 -198113046 + MIR SINE MIR 74 203 -59 22 0 0 0 chr2 52574828 52574850 -198113004 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 52575356 52575379 -198112475 + AT_rich Low_complexity Low_complexity 1 23 0 459 289 40 55 chr2 52575757 52575958 -198111896 + MIR SINE MIR 48 245 -17 186 281 167 31 chr2 52577944 52578040 -198109814 + L3 LINE CR1 1443 1551 -26 1203 42 7 0 chr2 52578711 52578854 -198109000 + AluY SINE Alu 1 144 -167 1727 223 94 47 chr2 52579806 52580399 -198107455 - MLT1E2 LTR MaLR -2 624 4 1288 238 27 32 chr2 52580978 52581386 -198106468 - Charlie1b DNA MER1_type 0 523 118 603 330 118 23 chr2 52581471 52582117 -198105737 - L2 LINE L2 -10 3303 2601 245 352 43 12 chr2 52582172 52582334 -198105520 - L3 LINE CR1 -737 840 674 357 24 0 0 chr2 52583420 52583459 -198104395 + (CA)n Simple_repeat Simple_repeat 1 81 0 357 24 0 0 chr2 52583459 52583501 -198104353 + (CA)n Simple_repeat Simple_repeat 2 43 0 2228 117 3 0 chr2 52583536 52583835 -198104019 + AluSq SINE Alu 3 302 -11 1494 229 0 3 chr2 52585584 52585876 -198101978 + AluJo SINE Alu 1 291 -21 22 0 0 0 chr2 52585880 52585902 -198101952 + AT_rich Low_complexity Low_complexity 1 22 0 1639 162 0 0 chr2 52589533 52589775 -198098079 + AluSq SINE Alu 44 288 -25 423 0 0 0 chr2 52589775 52589822 -198098032 + (CA)n Simple_repeat Simple_repeat 2 48 0 1639 162 0 0 chr2 52589822 52589838 -198098016 + AluSq SINE Alu 287 302 -11 342 252 71 16 chr2 52593330 52593457 -198094397 - Charlie8 DNA MER1_type -2253 164 31 210 37 0 0 chr2 52593512 52593539 -198094315 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 25 0 0 0 chr2 52594518 52594543 -198093311 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 52595136 52595159 -198092695 + AT_rich Low_complexity Low_complexity 1 23 0 1727 145 7 25 chr2 52595169 52595452 -198092402 - AluJb SINE Alu -24 288 11 180 0 0 0 chr2 52596010 52596030 -198091824 + (TA)n Simple_repeat Simple_repeat 2 21 0 2338 88 0 0 chr2 52596030 52596326 -198091528 - AluY SINE Alu -15 296 1 213 289 13 0 chr2 52596672 52596748 -198091106 + (TATATG)n Simple_repeat Simple_repeat 5 81 0 506 303 53 11 chr2 52597606 52597794 -198090060 - MIR SINE MIR -3 259 64 1809 135 3 59 chr2 52599522 52599826 -198088028 - AluJb SINE Alu -25 287 1 23 68 0 0 chr2 52599982 52600026 -198087828 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr2 52601637 52601660 -198086194 + AT_rich Low_complexity Low_complexity 1 23 0 212 59 29 0 chr2 52602805 52602839 -198085015 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 681 310 38 13 chr2 52603027 52603266 -198084588 - MIR SINE MIR -6 256 12 1999 173 82 0 chr2 52603305 52603669 -198084185 - MSTB LTR MaLR 0 426 33 1307 161 25 12 chr2 52604424 52604798 -198083056 - MSTB LTR MaLR -4 422 1 496 365 79 6 chr2 52604840 52605169 -198082685 + L2 LINE L2 2328 2680 -634 1273 82 0 0 chr2 52605566 52605737 -198082117 - L1PA7 LINE L1 0 6154 5984 814 30 0 10 chr2 52605739 52605840 -198082014 - L1PA7 LINE L1 -267 5887 5788 26 30 0 0 chr2 52606890 52606923 -198080931 + AT_rich Low_complexity Low_complexity 1 33 0 21 82 0 0 chr2 52608223 52608272 -198079582 + AT_rich Low_complexity Low_complexity 1 49 0 21 36 0 0 chr2 52608363 52608391 -198079463 + AT_rich Low_complexity Low_complexity 1 28 0 2199 237 76 14 chr2 52608606 52609252 -198078602 + L1MC4a LINE L1 7121 7806 -2 299 151 27 0 chr2 52609796 52609869 -198077985 + T-rich Low_complexity Low_complexity 4 78 0 23 33 0 0 chr2 52612521 52612551 -198075303 + AT_rich Low_complexity Low_complexity 1 30 0 234 0 0 0 chr2 52612769 52612795 -198075059 + (CA)n Simple_repeat Simple_repeat 1 26 0 384 22 0 0 chr2 52612795 52612840 -198075014 + (CAT)n Simple_repeat Simple_repeat 1 45 0 1437 237 47 102 chr2 52613078 52613714 -198074140 + L1ME1 LINE L1 5487 6087 -79 387 0 0 0 chr2 52615237 52615280 -198072574 + (CA)n Simple_repeat Simple_repeat 1 43 0 404 246 127 8 chr2 52615549 52615675 -198072179 + L2 LINE L2 3119 3259 -13 363 360 11 27 chr2 52616637 52616823 -198071031 + MER5A DNA MER1_type 7 189 0 1062 133 169 0 chr2 52616975 52617072 -198070782 + MER30 DNA MER1_type 2 81 -149 188 35 35 0 chr2 52617072 52617101 -198070753 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1062 133 169 0 chr2 52617101 52617198 -198070656 + MER30 DNA MER1_type 81 229 -1 289 338 13 38 chr2 52618419 52618576 -198069278 + MIR SINE MIR 10 162 -100 272 342 36 18 chr2 52618754 52618865 -198068989 + L2 LINE L2 3193 3305 -8 607 306 40 18 chr2 52619332 52619554 -198068300 + MIR SINE MIR 14 240 -22 363 283 22 0 chr2 52619613 52619705 -198068149 - L2 LINE L2 -18 3295 3202 24 0 0 0 chr2 52620095 52620119 -198067735 + AT_rich Low_complexity Low_complexity 1 24 0 252 0 0 0 chr2 52621237 52621265 -198066589 + (CA)n Simple_repeat Simple_repeat 2 29 0 607 299 142 40 chr2 52622116 52622612 -198065242 - L2 LINE L2 -20 3293 2747 676 260 23 58 chr2 52623400 52623658 -198064196 - L2 LINE L2 -565 2749 2501 6884 30 2 1 chr2 52624820 52625647 -198062207 + L1PA4 LINE L1 5328 6155 0 206 139 0 70 chr2 52625682 52625725 -198062129 + (GAAAA)n Simple_repeat Simple_repeat 5 44 0 953 213 67 106 chr2 52626092 52626509 -198061345 + MER57A LTR ERV1 3 403 0 3049 196 99 14 chr2 52626730 52627450 -198060404 + L1MB7 LINE L1 5389 6169 -15 978 205 181 23 chr2 52628000 52628134 -198059720 - AluSg SINE Alu 0 300 189 570 114 0 0 chr2 52628134 52628222 -198059632 + (TTATG)n Simple_repeat Simple_repeat 2 89 0 978 205 181 23 chr2 52628222 52628346 -198059508 - AluSg SINE Alu -111 189 1 25 51 0 0 chr2 52628769 52628808 -198059046 + AT_rich Low_complexity Low_complexity 1 39 0 203 207 52 52 chr2 52629981 52630039 -198057815 - MIR SINE MIR -71 191 134 435 38 0 0 chr2 52630380 52630433 -198057421 + (TG)n Simple_repeat Simple_repeat 2 54 0 25 0 0 0 chr2 52631594 52631619 -198056235 + AT_rich Low_complexity Low_complexity 1 25 0 447 319 86 26 chr2 52631681 52632133 -198055721 - L1ME4a LINE L1 -108 6013 5535 21 0 0 0 chr2 52632427 52632448 -198055406 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 52632947 52632968 -198054886 + (A)n Simple_repeat Simple_repeat 1 21 0 320 47 0 0 chr2 52633473 52633516 -198054338 - MADE1 DNA Mariner -37 43 1 25 31 0 0 chr2 52633933 52633965 -198053889 + AT_rich Low_complexity Low_complexity 1 32 0 585 233 55 93 chr2 52634036 52634272 -198053582 - L2 LINE L2 -4 3309 3083 30 59 0 0 chr2 52634789 52634840 -198053014 + AT_rich Low_complexity Low_complexity 1 51 0 186 173 40 0 chr2 52634854 52634929 -198052925 + (TA)n Simple_repeat Simple_repeat 1 78 0 22 35 0 0 chr2 52635355 52635384 -198052470 + AT_rich Low_complexity Low_complexity 1 29 0 242 298 108 33 chr2 52635768 52636209 -198051645 + L1 LINE L1 4628 5112 -1034 353 352 119 10 chr2 52636302 52636495 -198051359 - MIR SINE MIR -35 227 14 275 382 28 28 chr2 52637391 52637535 -198050319 + L2 LINE L2 3129 3272 0 21 0 0 0 chr2 52637617 52637638 -198050216 + AT_rich Low_complexity Low_complexity 1 21 0 478 259 15 38 chr2 52639431 52639562 -198048292 + MER5B DNA MER1_type 20 147 -31 2178 136 0 0 chr2 52640158 52640466 -198047388 + AluSx SINE Alu 3 310 -2 370 310 63 14 chr2 52640491 52640633 -198047221 + MIR3 SINE MIR 6 154 -54 249 241 0 0 chr2 52640641 52640695 -198047159 - MER112 DNA MER1_type -8 252 199 207 327 45 58 chr2 52641353 52641509 -198046345 - MER5B DNA MER1_type 0 178 25 517 221 9 0 chr2 52642231 52642344 -198045510 + MER105 DNA DNA 41 154 -50 21 57 0 0 chr2 52642473 52642508 -198045346 + AT_rich Low_complexity Low_complexity 1 35 0 214 227 0 0 chr2 52643142 52643186 -198044668 + L2 LINE L2 3266 3309 -4 408 383 11 11 chr2 52643218 52643406 -198044448 - MIR3 SINE MIR -3 205 18 31 44 0 0 chr2 52643409 52643454 -198044400 + AT_rich Low_complexity Low_complexity 1 45 0 2151 70 6 51 chr2 52644204 52644517 -198043337 + AluY SINE Alu 1 299 -12 443 275 127 42 chr2 52645184 52645373 -198042481 - MIR SINE MIR -39 223 19 672 363 60 21 chr2 52645379 52645938 -198041916 + L2 LINE L2 2620 3264 -49 426 244 156 38 chr2 52647058 52647218 -198040636 - MER5A DNA MER1_type -4 185 7 23 54 0 0 chr2 52647622 52647659 -198040195 + AT_rich Low_complexity Low_complexity 1 37 0 248 357 77 14 chr2 52648140 52648283 -198039571 + MIR3 SINE MIR 19 170 -38 211 303 15 15 chr2 52649283 52649349 -198038505 + MIR SINE MIR 82 147 -115 * 229 258 124 11 chr2 52649346 52649435 -198038419 - L3 LINE CR1 -5 1572 1474 256 261 29 0 chr2 52649723 52649792 -198038062 - L3 LINE CR1 -977 600 530 2180 248 117 44 chr2 52650049 52650900 -198036954 - L1ME3A LINE L1 -5 6165 5254 352 313 42 30 chr2 52651822 52651988 -198035866 + MIR3 SINE MIR 33 200 -8 219 36 0 0 chr2 52652039 52652067 -198035787 + (TG)n Simple_repeat Simple_repeat 2 29 0 263 302 19 0 chr2 52652100 52652206 -198035648 - L1ME3A LINE L1 -1135 5011 4904 357 24 0 0 chr2 52652281 52652323 -198035531 + (CA)n Simple_repeat Simple_repeat 1 42 0 400 292 100 41 chr2 52652538 52653458 -198034396 - L1ME LINE L1 -627 5543 4567 383 320 33 0 chr2 52653595 52653776 -198034078 - L1ME LINE L1 -1955 4191 4005 313 362 19 0 chr2 52654098 52654203 -198033651 + L2 LINE L2 3150 3256 -16 1030 32 0 0 chr2 52655465 52655588 -198032266 - L1P2 LINE L1 -345 5810 5688 2339 43 13 7 chr2 52655588 52655888 -198031966 + L1PA4 LINE L1 5850 6152 -3 268 68 68 27 chr2 52659344 52659417 -198028437 + A-rich Low_complexity Low_complexity 2 77 0 275 0 0 28 chr2 52660878 52660914 -198026940 + (TTA)n Simple_repeat Simple_repeat 3 37 0 641 279 128 9 chr2 52660917 52661136 -198026718 - MIR SINE MIR -7 255 11 1764 116 11 19 chr2 52662228 52662496 -198025358 - AluSx SINE Alu -17 295 30 247 133 0 44 chr2 52662496 52662536 -198025318 + Alu SINE Alu 10 47 -256 305 283 123 43 chr2 52662931 52663069 -198024785 - MIR3 SINE MIR -9 199 51 21 0 0 0 chr2 52663598 52663619 -198024235 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 52663803 52663825 -198024029 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 52664921 52664943 -198022911 + (T)n Simple_repeat Simple_repeat 1 22 0 32 0 0 0 chr2 52665003 52665035 -198022819 + AT_rich Low_complexity Low_complexity 1 32 0 1240 40 0 0 chr2 52665035 52665184 -198022670 - L1PA5 LINE L1 -8 6146 5998 2057 89 0 0 chr2 52665761 52666020 -198021834 - AluY SINE Alu -52 259 1 404 389 12 0 chr2 52667440 52667602 -198020252 - MIR SINE MIR -97 165 2 1117 170 199 17 chr2 52668629 52668870 -198018984 + AluSg1 SINE Alu 1 285 -24 309 155 0 0 chr2 52668870 52668928 -198018926 + (TA)n Simple_repeat Simple_repeat 1 58 0 354 61 0 0 chr2 52668998 52669047 -198018807 + (TA)n Simple_repeat Simple_repeat 2 50 0 256 200 20 0 chr2 52669048 52669098 -198018756 - L2 LINE L2 -36 3236 3186 400 303 5 28 chr2 52670006 52670203 -198017651 + MIR SINE MIR 15 248 -14 776 261 11 0 chr2 52670263 52670439 -198017415 + MER45A DNA AcHobo 1 178 0 471 262 177 14 chr2 52671242 52671383 -198016471 + MER5A DNA MER1_type 26 189 0 256 229 114 48 chr2 52671432 52671537 -198016317 - MER104 DNA Tc2 -37 143 32 239 0 32 0 chr2 52673039 52673070 -198014784 + (TTA)n Simple_repeat Simple_repeat 2 33 0 4695 159 6 29 chr2 52673070 52673402 -198014452 - L1MB1 LINE L1 -11 6157 5819 1994 128 3 3 chr2 52673402 52673690 -198014164 - AluSx SINE Alu -4 308 21 4695 159 6 29 chr2 52673690 52674251 -198013603 - L1MB1 LINE L1 -349 5819 5285 259 346 12 0 chr2 52674285 52674366 -198013488 - L2 LINE L2 -1 3271 3190 536 184 31 2 chr2 52674631 52674790 -198013064 + MER105 DNA DNA 10 203 -1 263 267 200 20 chr2 52675295 52675445 -198012409 - MER5A DNA MER1_type 0 189 13 291 214 0 0 chr2 52677023 52677093 -198010761 + GA-rich Low_complexity Low_complexity 3 72 0 200 243 0 0 chr2 52678524 52678578 -198009276 - MIR SINE MIR -57 151 97 22 0 0 0 chr2 52678583 52678605 -198009249 + AT_rich Low_complexity Low_complexity 1 22 0 2444 96 0 0 chr2 52679052 52679355 -198008499 + AluSx SINE Alu 1 303 -9 21 36 0 0 chr2 52679665 52679693 -198008161 + AT_rich Low_complexity Low_complexity 1 28 0 498 252 132 0 chr2 52680423 52680582 -198007272 + MIR SINE MIR 25 204 -58 2053 132 20 0 chr2 52680605 52680731 -198007123 + AluSx SINE Alu 1 123 -189 189 0 0 0 chr2 52680731 52680752 -198007102 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 2053 132 20 0 chr2 52680752 52680928 -198006926 + AluSx SINE Alu 123 309 -3 450 114 0 0 chr2 52680928 52680998 -198006856 + (TA)n Simple_repeat Simple_repeat 1 70 0 266 256 47 0 chr2 52681001 52681087 -198006767 + L1MC4 LINE L1 6614 6703 -1339 249 256 23 0 chr2 52681011 52681097 -198006757 - L1MC4 LINE L1 -1341 6701 6614 * 192 152 0 0 chr2 52681097 52681130 -198006724 + (CA)n Simple_repeat Simple_repeat 2 34 0 201 154 0 0 chr2 52681246 52681285 -198006569 + T-rich Low_complexity Low_complexity 1 39 0 291 381 25 0 chr2 52681288 52681406 -198006448 - MIR SINE MIR -141 121 1 2176 107 7 0 chr2 52681522 52681820 -198006034 - AluSq SINE Alu -13 300 1 191 286 11 22 chr2 52682420 52682511 -198005343 + L2 LINE L2 2664 2753 -561 1427 158 97 11 chr2 52682534 52682813 -198005041 + AluJo SINE Alu 3 305 -7 1279 109 5 21 chr2 52685471 52685663 -198002191 - THE1C LTR MaLR 0 375 187 448 296 12 80 chr2 52687386 52687636 -198000218 + MIR SINE MIR 30 262 0 540 0 0 0 chr2 52688235 52688295 -197999559 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 1738 163 53 36 chr2 52688792 52689149 -197998705 - MLT1A1 LTR MaLR -2 363 1 336 321 114 29 chr2 52689675 52689815 -197998039 - L2 LINE L2 0 3272 3121 181 289 0 0 chr2 52689862 52689914 -197997940 + MIR SINE MIR 53 104 -104 230 267 0 17 chr2 52689954 52690014 -197997840 + MIR SINE MIR 95 153 -109 1403 169 13 0 chr2 52690023 52690254 -197997600 + AluJb SINE Alu 1 234 -78 423 253 313 0 chr2 52692033 52692231 -197995623 + MIR SINE MIR 2 261 -1 1661 137 65 8 chr2 52692467 52692729 -197995125 + AluSx SINE Alu 4 280 -32 23 33 0 0 chr2 52692812 52692842 -197995012 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 52693723 52693746 -197994108 + AT_rich Low_complexity Low_complexity 1 23 0 395 280 75 5 chr2 52698198 52698398 -197989456 - L1ME LINE L1 -320 5801 5588 317 299 28 19 chr2 52699555 52699662 -197988192 - MIR SINE MIR -107 155 48 21 0 0 0 chr2 52700748 52700769 -197987085 + AT_rich Low_complexity Low_complexity 1 21 0 216 298 202 0 chr2 52702910 52703014 -197984840 - L2 LINE L2 -8 3305 3181 854 98 0 0 chr2 52704280 52704403 -197983451 - L1PA5 LINE L1 0 6154 6032 242 164 18 0 chr2 52704405 52704460 -197983394 + T-rich Low_complexity Low_complexity 4 59 0 515 323 12 12 chr2 52704997 52705164 -197982690 + MIR3 SINE MIR 35 201 -7 349 383 51 9 chr2 52706664 52706881 -197980973 + MIR SINE MIR 15 240 -22 450 310 70 5 chr2 52706957 52707144 -197980710 + MIR SINE MIR 35 233 -29 1684 182 4 4 chr2 52708287 52708605 -197979249 - AluJo SINE Alu 0 322 5 2565 111 8 16 chr2 52708959 52709337 -197978517 + THE1C LTR MaLR 1 375 0 2025 125 0 0 chr2 52709515 52709794 -197978060 - AluSq SINE Alu -34 279 1 490 166 11 13 chr2 52709794 52709888 -197977966 - MLT1C LTR MaLR -296 94 1 2183 123 0 0 chr2 52711154 52711447 -197976407 + AluSq SINE Alu 1 293 -20 24 53 0 0 chr2 52712020 52712058 -197975796 + AT_rich Low_complexity Low_complexity 1 38 0 180 77 0 0 chr2 52712088 52712114 -197975740 + (TG)n Simple_repeat Simple_repeat 2 27 0 1850 116 113 12 chr2 52712184 52712517 -197975337 - MER47A DNA MER2_type 0 366 1 569 100 0 0 chr2 52712954 52713034 -197974820 + MADE1 DNA Mariner 1 80 0 22 35 0 0 chr2 52713172 52713201 -197974653 + AT_rich Low_complexity Low_complexity 1 29 0 182 194 0 0 chr2 52714208 52714239 -197973615 - L2 LINE L2 -16 3256 3226 341 351 91 5 chr2 52714240 52714448 -197973406 - MIR SINE MIR -8 254 29 785 239 14 28 chr2 52714468 52714686 -197973168 - MER20 DNA MER1_type -4 215 1 1566 188 34 69 chr2 52714836 52715214 -197972640 + MLT1A1 LTR MaLR 1 365 0 185 196 22 0 chr2 52716442 52716488 -197971366 + GA-rich Low_complexity Low_complexity 1 47 0 260 263 50 61 chr2 52716700 52716799 -197971055 + MER5A DNA MER1_type 17 114 -75 997 211 9 28 chr2 52717877 52718095 -197969759 - MER20 DNA MER1_type 0 219 6 436 330 40 12 chr2 52719044 52719217 -197968637 + MIR SINE MIR 17 194 -68 314 296 61 0 chr2 52719597 52719712 -197968142 - L2 LINE L2 -46 3267 3146 234 240 40 0 chr2 52719839 52719889 -197967965 - MIR SINE MIR -91 117 66 21 0 0 0 chr2 52720857 52720878 -197966976 + AT_rich Low_complexity Low_complexity 1 21 0 1401 201 35 9 chr2 52721019 52721355 -197966499 + Tigger4(Zombi) DNA MER2_type 1 2731 0 649 148 28 0 chr2 52721437 52721545 -197966309 - AluSq SINE Alu -85 228 118 255 31 0 0 chr2 52721836 52721868 -197965986 + (TG)n Simple_repeat Simple_repeat 1 32 0 309 68 0 0 chr2 52723367 52723411 -197964443 + (TC)n Simple_repeat Simple_repeat 1 44 0 2242 69 24 7 chr2 52723617 52723905 -197963949 + AluY SINE Alu 1 293 -18 1975 128 16 7 chr2 52724379 52724726 -197963128 - AluSq SINE Alu 0 313 1 193 293 13 40 chr2 52724855 52724930 -197962924 - L3b LINE CR1 -127 1456 1384 1350 198 46 71 chr2 52726387 52726456 -197961398 - MLT1B LTR MaLR 0 390 321 2418 86 0 0 chr2 52726456 52726760 -197961094 + AluY SINE Alu 1 304 -7 1350 198 46 71 chr2 52726760 52727085 -197960769 - MLT1B LTR MaLR -69 321 6 200 357 100 41 chr2 52727174 52727465 -197960389 + L2 LINE L2 2553 2860 -454 191 242 129 48 chr2 52727793 52727855 -197959999 + L2 LINE L2 3201 3267 -5 204 265 0 0 chr2 52727869 52727918 -197959936 + (CA)n Simple_repeat Simple_repeat 1 49 0 243 0 0 0 chr2 52729213 52729240 -197958614 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 633 196 0 0 chr2 52729245 52729352 -197958502 - FLAM_A SINE Alu -35 107 1 396 0 0 0 chr2 52730572 52730616 -197957238 + (TG)n Simple_repeat Simple_repeat 1 44 0 316 111 130 0 chr2 52731933 52731987 -197955867 - FAM SINE Alu -10 165 105 2475 111 8 3 chr2 52731987 52732346 -197955508 + THE1B LTR MaLR 1 361 -3 2231 154 35 45 chr2 52732354 52732868 -197954986 + MLT2A2 LTR ERVL 1 514 -40 279 0 0 0 chr2 52732868 52732899 -197954955 + (CA)n Simple_repeat Simple_repeat 2 32 0 2231 154 35 45 chr2 52732899 52732940 -197954914 + MLT2A2 LTR ERVL 514 554 0 637 207 0 18 chr2 52732940 52733051 -197954803 - FAM SINE Alu -76 109 1 3105 154 2 4 chr2 52733077 52733602 -197954252 - L1PA16 LINE L1 -3 6163 5640 312 299 83 35 chr2 52734081 52734225 -197953629 + MIR SINE MIR 99 249 -13 207 0 0 0 chr2 52734251 52734274 -197953580 + (TTA)n Simple_repeat Simple_repeat 3 25 0 339 241 134 9 chr2 52734920 52735032 -197952822 - L2 LINE L2 -17 3296 3171 532 257 118 40 chr2 52735213 52735427 -197952427 - MIR SINE MIR -1 261 43 21 36 0 0 chr2 52737694 52737722 -197950132 + AT_rich Low_complexity Low_complexity 1 28 0 269 336 36 9 chr2 52738252 52738362 -197949492 - L2 LINE L2 -11 3261 3149 31 26 0 0 chr2 52738551 52738589 -197949265 + AT_rich Low_complexity Low_complexity 1 38 0 1235 192 36 28 chr2 52739082 52739332 -197948522 - AluJb SINE Alu -40 272 21 217 374 24 0 chr2 52739338 52739421 -197948433 + MIR3 SINE MIR 116 200 -8 285 29 0 0 chr2 52739661 52739695 -197948159 + (CA)n Simple_repeat Simple_repeat 2 35 0 245 226 16 0 chr2 52741027 52741089 -197946765 + (TA)n Simple_repeat Simple_repeat 1 63 0 211 283 50 75 chr2 52741673 52741793 -197946061 + L2 LINE L2 3192 3308 -5 21 0 0 0 chr2 52742074 52742095 -197945759 + AT_rich Low_complexity Low_complexity 1 21 0 352 270 184 31 chr2 52742540 52742703 -197945151 - L2 LINE L2 0 3313 3126 243 174 35 35 chr2 52747309 52747395 -197940459 + (TA)n Simple_repeat Simple_repeat 2 87 0 261 83 0 0 chr2 52747395 52747431 -197940423 + (CA)n Simple_repeat Simple_repeat 2 37 0 23 0 0 0 chr2 52749648 52749671 -197938183 + AT_rich Low_complexity Low_complexity 1 23 0 6317 82 38 11 chr2 52749772 52750232 -197937622 - L1PA7 LINE L1 0 6154 5708 2311 71 0 0 chr2 52750232 52750572 -197937282 + AluY SINE Alu 1 340 0 6317 82 38 11 chr2 52750572 52751047 -197936807 - L1PA7 LINE L1 -446 5708 5200 230 281 56 73 chr2 52751033 52751321 -197936533 - L1ME LINE L1 -217 5904 5622 * 1612 243 62 38 chr2 52751691 52752193 -197935661 - LTR40a LTR ERVL 0 519 6 418 278 217 14 chr2 52752515 52752727 -197935127 + MIR SINE MIR 8 262 0 1872 104 4 12 chr2 52752966 52753246 -197934608 + AluSx SINE Alu 35 312 0 208 410 0 0 chr2 52753792 52753887 -197933967 - MIR SINE MIR -111 151 57 21 0 0 0 chr2 52804011 52804032 -197883822 + AT_rich Low_complexity Low_complexity 1 21 0 255 317 78 0 chr2 52805341 52805433 -197882421 - MIR SINE MIR -65 143 59 1586 185 3 48 chr2 52805607 52805921 -197881933 - AluJo SINE Alu -12 300 1 542 165 11 0 chr2 52807199 52807290 -197880564 - AluSc SINE Alu -76 233 142 274 0 0 0 chr2 52807301 52807333 -197880521 - MADE1 DNA Mariner -37 43 12 2059 140 0 3 chr2 52808209 52808516 -197879338 + AluSx SINE Alu 6 311 -1 21 0 0 0 chr2 52808587 52808608 -197879246 + AT_rich Low_complexity Low_complexity 1 21 0 389 20 20 0 chr2 52808849 52808899 -197878955 + (TG)n Simple_repeat Simple_repeat 2 52 0 2777 123 32 0 chr2 52809327 52809735 -197878119 - MER1A DNA MER1_type 0 529 109 289 407 14 14 chr2 52809739 52809879 -197877975 - MER91A DNA MER1_type -56 140 1 1091 223 40 46 chr2 52810010 52810337 -197877517 - L1MC3 LINE L1 -1202 6583 6259 219 374 65 9 chr2 52810765 52810872 -197876982 + L2 LINE L2 3104 3216 -56 1417 184 24 17 chr2 52813418 52813740 -197874114 + AluJo SINE Alu 1 324 0 192 284 15 30 chr2 52818554 52818621 -197869233 - L2 LINE L2 -2 3270 3205 352 286 109 68 chr2 52818644 52818890 -197868964 + L1ME4a LINE L1 5694 5963 -158 374 39 19 0 chr2 52818890 52818942 -197868912 + (TA)n Simple_repeat Simple_repeat 2 54 0 352 286 109 68 chr2 52818942 52819090 -197868764 + L1ME4a LINE L1 5963 6104 -17 686 166 7 14 chr2 52821865 52822004 -197865850 - Charlie1 DNA MER1_type -1 2760 2623 * 1002 231 48 9 chr2 52821989 52822218 -197865636 - Charlie1 DNA MER1_type -2522 239 2 284 220 17 119 chr2 52822221 52822339 -197865515 - MER112 DNA MER1_type -37 223 118 203 291 79 31 chr2 52823198 52823325 -197864529 + L2 LINE L2 3177 3309 -4 365 327 53 27 chr2 52824306 52824456 -197863398 - MER5A DNA MER1_type 0 189 36 188 376 26 17 chr2 52825002 52825119 -197862735 + MER5A DNA MER1_type 4 121 -68 296 250 16 0 chr2 52825316 52825380 -197862474 - MER96B DNA MER1_type? 0 417 353 1220 228 67 35 chr2 52825380 52825665 -197862189 + AluJb SINE Alu 1 294 -8 649 228 72 91 chr2 52825695 52825971 -197861883 - MER96B DNA MER1_type? -146 271 1 1887 174 3 0 chr2 52826559 52826869 -197860985 - AluJb SINE Alu -1 311 1 8331 182 25 25 chr2 52827124 52828666 -197859188 + L1MA6 LINE L1 3632 4904 -1396 1356 114 53 40 chr2 52828666 52828796 -197859058 + MER30 DNA MER1_type 1 137 -93 2534 37 3 0 chr2 52828796 52829095 -197858759 - AluY SINE Alu -11 300 1 1356 114 53 40 chr2 52829095 52829191 -197858663 + MER30 DNA MER1_type 137 230 0 8331 182 25 25 chr2 52829191 52829946 -197857908 + L1MA6 LINE L1 4904 5935 -365 1698 170 18 4 chr2 52829946 52830222 -197857632 + AluSx SINE Alu 1 280 -32 8331 182 25 25 chr2 52830222 52830587 -197857267 + L1MA6 LINE L1 5935 6299 -1 205 244 0 0 chr2 52830631 52830676 -197857178 + MER5B DNA MER1_type 127 171 -7 2121 246 61 25 chr2 52831407 52831714 -197856140 - L1ME2 LINE L1 -168 5996 5702 2455 77 0 3 chr2 52831714 52832026 -197855828 - AluY SINE Alu 0 311 1 2121 246 61 25 chr2 52832026 52832677 -197855177 - L1ME2 LINE L1 -462 5702 4999 901 269 105 53 chr2 52833032 52833639 -197854215 + L1MC4a LINE L1 5537 6175 -1633 29 47 0 0 chr2 52833868 52833911 -197853943 + AT_rich Low_complexity Low_complexity 1 43 0 766 265 18 19 chr2 52834018 52834327 -197853527 + L1MC5 LINE L1 6685 7072 -970 269 239 15 0 chr2 52834375 52834442 -197853412 - MLT1C LTR MaLR -24 525 458 401 311 27 7 chr2 52834662 52834810 -197853044 - MLT1H LTR MaLR -387 162 12 340 253 124 27 chr2 52834815 52835001 -197852853 + L1MC5 LINE L1 6973 7176 -785 1093 234 63 57 chr2 52835308 52835766 -197852088 + L1MC5 LINE L1 6971 7431 -530 582 188 9 0 chr2 52836638 52836750 -197851104 + L1MA4 LINE L1 6115 6227 -73 202 230 11 46 chr2 52836878 52836965 -197850889 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 308 360 18 0 chr2 52838066 52838180 -197849674 - L2 LINE L2 -3 3269 3154 364 287 87 71 chr2 52839163 52840167 -197847687 + L1ME3A LINE L1 798 1817 -4579 575 283 44 15 chr2 52840379 52840764 -197847090 + L1ME3A LINE L1 2152 2506 -3709 2765 16 0 0 chr2 52840952 52841263 -197846591 + AluY SINE Alu 1 311 0 312 280 32 24 chr2 52841277 52841402 -197846452 + L1ME3A LINE L1 3270 3395 -2820 657 300 137 16 chr2 52841408 52841898 -197845956 + L1ME3A LINE L1 3579 4127 -2088 22 56 0 0 chr2 52841937 52841973 -197845881 + AT_rich Low_complexity Low_complexity 1 36 0 2186 263 80 19 chr2 52842098 52843181 -197844673 + L1ME3A LINE L1 5075 6229 -10 1999 202 4 129 chr2 52843265 52843800 -197844054 - MER70A LTR ERVL -4 468 1 396 0 0 0 chr2 52844129 52844173 -197843681 + (TG)n Simple_repeat Simple_repeat 1 44 0 914 216 68 47 chr2 52844362 52844658 -197843196 - MLT1C LTR MaLR -39 428 127 511 200 35 0 chr2 52844792 52844907 -197842947 - FLAM_C SINE Alu 0 143 25 23 33 0 0 chr2 52845071 52845101 -197842753 + AT_rich Low_complexity Low_complexity 1 30 0 362 364 51 15 chr2 52846474 52846669 -197841185 + MIR SINE MIR 45 246 -16 711 239 157 4 chr2 52847342 52847572 -197840282 - L1ME3 LINE L1 0 6162 5898 26 0 0 0 chr2 52848435 52848461 -197839393 + AT_rich Low_complexity Low_complexity 1 26 0 606 279 172 9 chr2 52849481 52849696 -197838158 - MIR SINE MIR -11 251 2 376 304 29 68 chr2 52850442 52850649 -197837205 + L2 LINE L2 2635 2833 -481 254 303 151 25 chr2 52850921 52851040 -197836814 + L2 LINE L2 3180 3313 0 270 136 0 0 chr2 52851041 52851085 -197836769 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 827 246 32 0 chr2 52852006 52852193 -197835661 - MER58A DNA MER1_type -31 193 1 1668 180 10 0 chr2 52852714 52853003 -197834851 - AluSx SINE Alu -20 292 1 359 351 26 0 chr2 52853155 52853269 -197834585 + MIR SINE MIR 41 157 -105 181 356 11 11 chr2 52853483 52853573 -197834281 - MIR SINE MIR -117 145 56 325 269 13 0 chr2 52854357 52854435 -197833419 - MLT1L LTR MaLR -536 79 1 360 337 54 6 chr2 52855406 52855572 -197832282 + MIR SINE MIR 83 256 -6 243 79 0 0 chr2 52856279 52856317 -197831537 + (CA)n Simple_repeat Simple_repeat 1 38 0 310 284 58 58 chr2 52856707 52856862 -197830992 + MLT1K LTR MaLR 131 285 -303 244 302 153 26 chr2 52857237 52857426 -197830428 - L2 LINE L2 -191 3081 2869 21 0 0 0 chr2 52857592 52857613 -197830241 + AT_rich Low_complexity Low_complexity 1 21 0 282 306 78 50 chr2 52858815 52859034 -197828820 + L2 LINE L2 2859 3083 -189 191 300 83 17 chr2 52859107 52859167 -197828687 + L2 LINE L2 3245 3308 -5 29 60 0 0 chr2 52860087 52860137 -197827717 + AT_rich Low_complexity Low_complexity 1 50 0 209 285 161 0 chr2 52860430 52860560 -197827294 + MIR SINE MIR 112 262 0 34 0 0 0 chr2 52860987 52861021 -197826833 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 52861562 52861584 -197826270 + AT_rich Low_complexity Low_complexity 1 22 0 534 268 0 0 chr2 52862752 52862879 -197824975 + FLAM_A SINE Alu 7 133 -9 534 296 35 51 chr2 52863428 52863685 -197824169 + L2 LINE L2 2703 2955 -359 433 345 77 41 chr2 52863710 52863956 -197823898 + MIR SINE MIR 8 262 0 569 303 82 23 chr2 52864005 52864309 -197823545 + L2 LINE L2 2991 3312 -1 2899 179 5 11 chr2 52864639 52865198 -197822656 + L1MB1 LINE L1 5612 6167 -1 301 203 114 114 chr2 52866471 52866594 -197821260 + MIR SINE MIR 37 159 -103 27 29 0 0 chr2 52866642 52866676 -197821178 + AT_rich Low_complexity Low_complexity 1 34 0 207 0 0 0 chr2 52866883 52866906 -197820948 + (T)n Simple_repeat Simple_repeat 1 23 0 213 173 39 19 chr2 52868494 52868546 -197819308 + (CA)n Simple_repeat Simple_repeat 1 53 0 333 0 0 0 chr2 52868789 52868826 -197819028 + (CA)n Simple_repeat Simple_repeat 2 38 0 347 89 18 0 chr2 52870393 52870449 -197817405 + (GGA)n Simple_repeat Simple_repeat 1 57 0 423 56 0 0 chr2 52870753 52870807 -197817047 + (GA)n Simple_repeat Simple_repeat 1 54 0 708 261 49 20 chr2 52871907 52872110 -197815744 + MIR SINE MIR 13 221 -41 232 259 0 0 chr2 52873156 52873210 -197814644 + MIR SINE MIR 97 150 -112 649 321 63 4 chr2 52873254 52873491 -197814363 - MIR SINE MIR -10 252 2 619 290 31 88 chr2 52876303 52876655 -197811199 - MER102b DNA MER1_type 0 341 10 273 191 118 0 chr2 52876971 52877039 -197810815 + MLT1B LTR MaLR 1 76 -314 370 280 91 117 chr2 52877155 52877505 -197810349 + L2 LINE L2 2931 3271 -1 2060 148 34 3 chr2 52877638 52877995 -197809859 - Tigger2 DNA MER2_type -1 2717 2350 694 179 0 45 chr2 52877998 52878132 -197809722 - Tigger2 DNA MER2_type -2590 128 1 2185 168 57 2 chr2 52878190 52878594 -197809260 + MSTB LTR MaLR 1 426 0 10548 142 15 19 chr2 52878609 52880298 -197807556 + HERVL LTR ERVL 3063 4744 -910 1544 249 149 13 chr2 52880298 52881001 -197806853 + L1ME1 LINE L1 1808 2639 -4082 609 200 32 7 chr2 52881004 52881159 -197806695 + L1ME1 LINE L1 4988 5146 -1394 248 217 17 0 chr2 52881147 52881207 -197806647 - L1M4 LINE L1 -1449 4697 4637 * 2086 213 63 86 chr2 52881183 52881460 -197806394 + L1ME1 LINE L1 5324 5606 -954 1651 31 0 0 chr2 52881460 52881654 -197806200 + L1PA3 LINE L1 5957 6150 -5 2086 213 63 86 chr2 52881654 52882635 -197805219 + L1ME1 LINE L1 5606 6556 -4 350 332 123 41 chr2 52883359 52883699 -197804155 - L2 LINE L2 0 3313 2946 315 248 80 29 chr2 52883846 52883983 -197803871 + MLT1J1 LTR MaLR 289 432 -14 1324 187 11 7 chr2 52884873 52885146 -197802708 - L1MB2 LINE L1 0 6171 5898 224 164 45 15 chr2 52885693 52885760 -197802094 + (TA)n Simple_repeat Simple_repeat 1 69 0 193 349 119 47 chr2 52886701 52887128 -197800726 - L2 LINE L2 -531 2783 2326 23 0 0 0 chr2 52887295 52887318 -197800536 + AT_rich Low_complexity Low_complexity 1 23 0 242 266 58 75 chr2 52887321 52887499 -197800355 - MIR SINE MIR -56 206 32 719 186 68 0 chr2 52887720 52887897 -197799957 + Charlie1 DNA MER1_type 2382 2570 -191 833 39 0 0 chr2 52887900 52888004 -197799850 - L1PA4 LINE L1 0 6155 6052 2272 115 0 0 chr2 52888062 52888367 -197799487 + AluSx SINE Alu 5 309 -3 215 250 0 113 chr2 52888417 52888497 -197799357 - MIR SINE MIR -30 232 162 180 211 0 0 chr2 52888538 52888576 -197799278 + MIR SINE MIR 48 85 -177 9033 243 32 35 chr2 52888954 52890793 -197797061 + L1MB5 LINE L1 2286 4129 -2045 387 0 0 0 chr2 52890793 52890836 -197797018 + (CA)n Simple_repeat Simple_repeat 2 44 0 9033 243 32 35 chr2 52890836 52891211 -197796643 + L1MB5 LINE L1 4129 4504 -1670 1500 208 0 10 chr2 52891211 52891500 -197796354 + AluJb SINE Alu 1 286 -26 9033 243 32 35 chr2 52891500 52893176 -197794678 + L1MB5 LINE L1 4504 6166 -8 23 0 0 0 chr2 52893318 52893341 -197794513 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 52893899 52893923 -197793931 + AT_rich Low_complexity Low_complexity 1 24 0 25 51 0 0 chr2 52893986 52894025 -197793829 + AT_rich Low_complexity Low_complexity 1 39 0 220 278 61 61 chr2 52894398 52894513 -197793341 - MIR SINE MIR -2 260 146 349 333 14 43 chr2 52894566 52894704 -197793150 - MIR SINE MIR -112 150 17 28 0 0 0 chr2 52895818 52895846 -197792008 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 52896535 52896559 -197791295 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 52897532 52897567 -197790287 + AT_rich Low_complexity Low_complexity 1 35 0 243 137 157 0 chr2 52898278 52898329 -197789525 - L1ME3 LINE L1 -64 6098 6040 1625 270 53 34 chr2 52898339 52898724 -197789130 - L1ME3 LINE L1 -204 5960 5584 825 307 58 25 chr2 52898724 52899170 -197788684 - LTR16B LTR ERVL -2 462 2 1625 270 53 34 chr2 52899170 52899874 -197787980 - L1ME3 LINE L1 -580 5584 4844 526 313 120 5 chr2 52899885 52900093 -197787761 - MIR SINE MIR -27 235 4 896 98 15 0 chr2 52900255 52900388 -197787466 - L1PA11 LINE L1 -2 6172 6038 236 259 105 56 chr2 52900903 52901065 -197786789 - L1ME4a LINE L1 -6 6115 5946 215 250 0 0 chr2 52901066 52901110 -197786744 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 22 0 0 0 chr2 52901878 52901900 -197785954 + AT_rich Low_complexity Low_complexity 1 22 0 273 243 14 0 chr2 52901943 52902017 -197785837 - L1MA9 LINE L1 0 6312 6238 1966 131 168 20 chr2 52902059 52902411 -197785443 - MER4A LTR ERV1 0 664 261 633 121 0 10 chr2 52902411 52902510 -197785344 - MER4A LTR ERV1 -566 98 1 2309 87 15 102 chr2 52902535 52902947 -197784907 - MER4A-int LTR ERV1 -2 6596 6221 309 75 0 0 chr2 52902952 52902992 -197784862 - MER4A LTR ERV1 -624 40 1 591 164 0 25 chr2 52902996 52903118 -197784736 - L1MA9 LINE L1 -147 6165 6047 728 354 82 36 chr2 52903312 52904254 -197783600 - L2 LINE L2 -609 2705 1808 2312 81 0 3 chr2 52904254 52904552 -197783302 - AluY SINE Alu -4 307 11 728 354 82 36 chr2 52904552 52904575 -197783279 - L2 LINE L2 -1506 1808 1788 3648 91 5 74 chr2 52904575 52905048 -197782806 + MER41A LTR ERV1 1 426 -128 2466 63 0 3 chr2 52905048 52905351 -197782503 - AluSc SINE Alu -7 302 1 3648 91 5 74 chr2 52905351 52905472 -197782382 + MER41A LTR ERV1 426 554 0 728 354 82 36 chr2 52905472 52905722 -197782132 - L2 LINE L2 -1526 1788 1433 1919 141 0 0 chr2 52905931 52906215 -197781639 - AluSq SINE Alu -29 284 1 2419 72 3 0 chr2 52906871 52907177 -197780677 + AluY SINE Alu 1 307 -4 300 212 0 0 chr2 52907578 52907644 -197780210 + GA-rich Low_complexity Low_complexity 2 67 0 629 272 51 51 chr2 52908317 52908534 -197779320 - MIR SINE MIR 0 262 46 881 320 87 33 chr2 52908682 52909073 -197778781 + LTR16C LTR ERVL 72 483 -8 32 81 0 0 chr2 52909569 52909643 -197778211 + AT_rich Low_complexity Low_complexity 1 74 0 24 67 0 0 chr2 52909809 52909854 -197778000 + AT_rich Low_complexity Low_complexity 1 45 0 22 80 0 0 chr2 52910198 52910248 -197777606 + AT_rich Low_complexity Low_complexity 1 50 0 27 0 0 0 chr2 52911270 52911297 -197776557 + AT_rich Low_complexity Low_complexity 1 27 0 791 217 19 0 chr2 52911427 52911588 -197776266 + FAM SINE Alu 5 168 -7 2128 155 77 32 chr2 52912752 52913191 -197774663 + LTR2B LTR ERV1 32 490 0 615 257 35 20 chr2 52913191 52913379 -197774475 - MER34 LTR ERV1 -351 191 1 197 33 33 0 chr2 52914325 52914355 -197773499 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 250 315 0 0 chr2 52915564 52915637 -197772217 + (TG)n Simple_repeat Simple_repeat 2 74 0 666 346 11 19 chr2 52915786 52916046 -197771808 - MIR SINE MIR -3 259 2 217 209 45 30 chr2 52916454 52916521 -197771333 - L3 LINE CR1 -73 1504 1437 491 229 29 97 chr2 52916587 52916762 -197771092 + LTR33A LTR ERVL 6 168 -355 756 229 74 13 chr2 52916804 52917035 -197770819 + LTR33A LTR ERVL 279 523 0 649 237 0 0 chr2 52917119 52917281 -197770573 - FLAM_C SINE Alu 0 164 3 240 322 96 35 chr2 52918049 52918164 -197769690 - L2 LINE L2 -10 3262 3141 1082 224 58 7 chr2 52918613 52918907 -197768947 - L1MD3 LINE L1 -937 7058 6750 1940 193 38 92 chr2 52918920 52919443 -197768411 + LTR42 LTR ERVL 1 495 0 598 338 39 62 chr2 52920575 52921376 -197766478 + LTR57-int LTR ERVL 1856 2556 -2787 276 323 26 39 chr2 52921407 52921562 -197766292 + LTR57-int LTR ERVL 2779 2931 -3116 2451 155 35 19 chr2 52921740 52922172 -197765682 - Tigger2 DNA MER2_type 0 2718 2280 405 229 12 0 chr2 52922165 52922248 -197765606 - Tigger2 DNA MER2_type -2634 84 1 * 261 326 29 29 chr2 52922321 52922496 -197765358 + LTR57-int LTR ERVL 3276 3450 -2597 1862 235 24 53 chr2 52925276 52925786 -197762068 + LTR42 LTR ERVL 1 495 0 387 203 14 0 chr2 52925787 52925861 -197761993 - L1MC4 LINE L1 -1278 6764 6690 26 0 0 0 chr2 52926279 52926305 -197761549 + AT_rich Low_complexity Low_complexity 1 26 0 195 129 0 0 chr2 52926515 52926546 -197761308 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1921 119 0 83 chr2 52927517 52927844 -197760010 - AluSx SINE Alu -2 310 11 514 213 125 25 chr2 52927866 52928026 -197759828 + MER58C DNA MER1_type 38 213 -2 448 360 61 24 chr2 52928893 52929221 -197758633 + HAL1 LINE L1 1427 1766 -741 331 294 106 27 chr2 52929698 52930065 -197757789 + L1MC/D LINE L1 5415 5809 -312 22 70 0 0 chr2 52930135 52930178 -197757676 + AT_rich Low_complexity Low_complexity 1 43 0 22 70 0 0 chr2 52930827 52930870 -197756984 + AT_rich Low_complexity Low_complexity 1 43 0 393 349 17 34 chr2 52932300 52932475 -197755379 + MIR SINE MIR 21 192 -70 2658 224 86 38 chr2 52932893 52933835 -197754019 - L1ME1 LINE L1 -5 6161 5188 397 287 50 10 chr2 52934581 52934682 -197753172 - L2 LINE L2 0 3272 3168 480 295 87 6 chr2 52935787 52935970 -197751884 - MIR SINE MIR -56 206 9 180 278 0 56 chr2 52937094 52937148 -197750706 - L3 LINE CR1 -1025 552 502 433 298 176 0 chr2 52937596 52937801 -197750053 - MIR SINE MIR -14 248 8 445 304 14 0 chr2 52938735 52938883 -197748971 - MIR3 SINE MIR -10 198 49 1779 154 10 26 chr2 52938887 52939192 -197748662 + AluSx SINE Alu 3 302 -10 199 340 90 21 chr2 52940082 52940226 -197747628 + MIR3 SINE MIR 3 156 -52 342 143 18 0 chr2 52940650 52940706 -197747148 + AluJb SINE Alu 3 59 -243 290 162 0 4 chr2 52940782 52940955 -197746899 + AluJb SINE Alu 62 302 0 1380 184 31 34 chr2 52941076 52941370 -197746484 - AluJo SINE Alu -11 301 9 258 354 92 0 chr2 52942832 52942962 -197744892 - L2 LINE L2 0 3313 3172 987 86 0 21 chr2 52943082 52943222 -197744632 + MER11B LTR ERVK 1086 1222 -14 772 333 126 30 chr2 52943242 52944065 -197743789 + L2 LINE L2 2412 3313 0 26 0 0 0 chr2 52944333 52944359 -197743495 + AT_rich Low_complexity Low_complexity 1 26 0 1104 252 44 53 chr2 52945312 52945839 -197742015 + MER39 LTR ERV1 1 707 0 325 313 130 0 chr2 52946345 52946476 -197741378 + MIR3 SINE MIR 49 196 -12 202 182 0 45 chr2 52947295 52947339 -197740515 + GA-rich Low_complexity Low_complexity 3 44 0 723 130 0 0 chr2 52948106 52948241 -197739613 + AluSg/x SINE Alu 175 309 0 690 203 7 0 chr2 52948858 52949006 -197738848 - L1MA5A LINE L1 -4 6293 6145 1934 216 2 5 chr2 52949006 52949611 -197738243 + L1M2 LINE L1 2488 3090 -3758 2957 31 0 8 chr2 52949774 52950131 -197737723 + L1PA4 LINE L1 5802 6155 0 378 352 67 30 chr2 52950349 52950619 -197737235 + L2 LINE L2 2949 3228 -44 22 35 0 0 chr2 52951126 52951155 -197736699 + AT_rich Low_complexity Low_complexity 1 29 0 34 24 0 0 chr2 52952293 52952334 -197735520 + AT_rich Low_complexity Low_complexity 1 41 0 377 289 57 95 chr2 52953979 52954360 -197733494 - L1MC4a LINE L1 -338 5783 5478 1340 195 76 11 chr2 52954366 52954643 -197733211 - AluJo SINE Alu -17 295 1 230 303 28 9 chr2 52954696 52954805 -197733049 - L1P5 LINE L1 -723 5431 5321 195 254 68 0 chr2 52954845 52954904 -197732950 - MIR SINE MIR -7 255 193 192 349 18 72 chr2 52955363 52955529 -197732325 - L2 LINE L2 -610 2704 2548 286 336 40 20 chr2 52957938 52958087 -197729767 + L3b LINE CR1 1277 1428 -155 22 0 0 0 chr2 52958180 52958202 -197729652 + AT_rich Low_complexity Low_complexity 1 22 0 621 291 41 23 chr2 52958215 52958435 -197729419 + MIR SINE MIR 17 240 -22 193 338 29 15 chr2 52958608 52958676 -197729178 + MIR SINE MIR 25 93 -115 5565 103 38 0 chr2 52959432 52960668 -197727186 + L1PA7 LINE L1 4631 5986 -168 410 312 102 86 chr2 53012185 53012627 -197675227 - L2 LINE L2 0 3272 2824 702 224 118 0 chr2 53012841 53013002 -197674852 + MER5A DNA MER1_type 1 180 -9 604 340 34 0 chr2 53014078 53014316 -197673538 - MIR SINE MIR -1 261 16 244 358 18 28 chr2 53014746 53014855 -197672999 + MIR SINE MIR 18 125 -83 821 280 42 13 chr2 53015158 53015665 -197672189 - MLT1E3 LTR MaLR 0 624 1 1524 188 57 38 chr2 53015998 53016366 -197671488 - THE1C LTR MaLR 0 375 1 317 345 18 48 chr2 53016617 53016785 -197671069 + MER5A DNA MER1_type 2 164 -25 289 344 13 52 chr2 53016648 53016802 -197671052 - MER5A DNA MER1_type -21 168 21 * 361 281 0 22 chr2 53017030 53017119 -197670735 - MIR3 SINE MIR -24 184 98 273 373 8 8 chr2 53018707 53018833 -197669021 - MIR3 SINE MIR -1 207 82 430 289 73 44 chr2 53020141 53020345 -197667509 + MIR SINE MIR 48 257 -5 285 89 0 0 chr2 53021289 53021334 -197666520 + (CA)n Simple_repeat Simple_repeat 2 46 0 315 49 0 0 chr2 53021855 53021896 -197665958 + (CA)n Simple_repeat Simple_repeat 2 42 0 285 29 0 0 chr2 53021895 53021929 -197665925 + (GA)n Simple_repeat Simple_repeat 2 35 0 * 306 265 99 21 chr2 53022642 53022900 -197664954 - MER110 LTR ERV1 -27 464 155 328 102 68 0 chr2 53023217 53023276 -197664578 + L1PA16 LINE L1 6100 6162 -4 423 0 0 0 chr2 53024027 53024074 -197663780 + (TC)n Simple_repeat Simple_repeat 2 48 0 379 319 109 33 chr2 53024917 53025221 -197662633 - Tigger8 DNA MER2_type -193 473 147 226 320 39 65 chr2 53025290 53025443 -197662411 + L2 LINE L2 3163 3311 -2 210 313 60 12 chr2 53026608 53026691 -197661163 - MIR SINE MIR -167 95 9 228 295 53 21 chr2 53027783 53027878 -197659976 - MER5A DNA MER1_type -56 133 36 1704 188 95 109 chr2 53028337 53028897 -197658957 - MLT2B1 LTR ERVL -2 518 1 21 36 0 0 chr2 53029184 53029212 -197658642 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 53029457 53029479 -197658375 + (TC)n Simple_repeat Simple_repeat 1 22 0 2154 113 10 0 chr2 53029681 53029982 -197657872 + AluSq SINE Alu 1 304 -9 239 306 93 42 chr2 53030994 53031187 -197656667 + L2 LINE L2 2482 2684 -630 584 311 0 7 chr2 53031413 53031561 -197656293 + MER63A DNA MER1_type 62 208 -2 252 320 66 113 chr2 53031608 53032061 -197655793 + L2 LINE L2 2821 3252 -20 203 250 0 0 chr2 53032128 53032172 -197655682 + L2 LINE L2 3223 3266 -6 403 186 40 34 chr2 53033545 53033722 -197654132 + (TA)n Simple_repeat Simple_repeat 2 179 0 288 218 5 78 chr2 53033645 53033838 -197654016 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 * 23 0 0 0 chr2 53033977 53034000 -197653854 + AT_rich Low_complexity Low_complexity 1 23 0 711 264 101 56 chr2 53034114 53034435 -197653419 + L1M4 LINE L1 2506 2860 -3286 1774 179 0 3 chr2 53034435 53034732 -197653122 - AluJb SINE Alu -16 296 1 711 264 101 56 chr2 53034732 53034925 -197652929 + L1M4 LINE L1 2860 3043 -3103 23 68 0 0 chr2 53035358 53035402 -197652452 + AT_rich Low_complexity Low_complexity 1 44 0 751 151 28 4 chr2 53035429 53035641 -197652213 - MLT2B2 LTR ERVL -206 309 1 1826 271 78 17 chr2 53035659 53036238 -197651616 + L1M4 LINE L1 471 1084 -5775 5198 244 46 32 chr2 53036314 53038023 -197649831 + L1M4 LINE L1 3082 4824 -2133 2224 109 0 6 chr2 53038023 53038335 -197649519 + AluSp SINE Alu 1 310 -3 5198 244 46 32 chr2 53038335 53038605 -197649249 + L1M4 LINE L1 4824 5089 -1868 42791 44 7 5 chr2 53038712 53044836 -197643018 - L1PA4 LINE L1 -3 6152 15 600 312 41 24 chr2 53045481 53045898 -197641956 - HAL1 LINE L1 -838 1669 1246 210 291 123 89 chr2 53045911 53046090 -197641764 + MIR SINE MIR 31 215 -47 368 200 11 0 chr2 53046095 53046185 -197641669 + (TA)n Simple_repeat Simple_repeat 1 91 0 27 62 0 0 chr2 53046725 53046773 -197641081 + AT_rich Low_complexity Low_complexity 1 48 0 322 328 129 50 chr2 53047224 53047605 -197640249 + L3 LINE CR1 1165 1575 -2 858 259 35 4 chr2 53047861 53048089 -197639765 - MIR SINE MIR -21 241 7 4199 74 4 0 chr2 53048879 53049431 -197638423 - MER41A LTR ERV1 0 554 1 40 49 0 0 chr2 53049748 53049809 -197638045 + AT_rich Low_complexity Low_complexity 1 61 0 239 333 0 14 chr2 53050651 53050723 -197637131 - MIR SINE MIR -2 260 190 3751 156 41 12 chr2 53050920 53051607 -197636247 + MER39 LTR ERV1 1 707 0 2089 156 58 86 chr2 53053144 53053645 -197634209 + MER67D LTR ERV1 25 511 -3 338 383 43 31 chr2 53055014 53055270 -197632584 + MIR SINE MIR 4 262 0 2404 67 0 16 chr2 53058042 53058358 -197629496 + AluY SINE Alu 1 311 0 182 343 74 9 chr2 53059004 53059112 -197628742 + MIR SINE MIR 136 250 -12 859 186 0 49 chr2 53059285 53059468 -197628386 + AluJo SINE Alu 1 174 -138 32 0 0 0 chr2 53060259 53060291 -197627563 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 53060871 53060892 -197626962 + AT_rich Low_complexity Low_complexity 1 21 0 2115 128 0 0 chr2 53060928 53061226 -197626628 + AluSq SINE Alu 1 298 -15 268 299 90 66 chr2 53062230 53062441 -197625413 + MIR SINE MIR 12 227 -35 229 274 128 68 chr2 53063241 53063358 -197624496 - L2 LINE L2 -12 3260 3137 261 304 25 0 chr2 53063361 53063440 -197624414 + GA-rich Low_complexity Low_complexity 3 83 0 431 270 129 47 chr2 53064014 53064247 -197623607 + MIR SINE MIR 1 252 -10 501 374 72 18 chr2 53064330 53064796 -197623058 + L2 LINE L2 2702 3193 -120 432 0 0 0 chr2 53066940 53066988 -197620866 + (TG)n Simple_repeat Simple_repeat 1 48 0 1973 112 4 0 chr2 53066988 53067264 -197620590 - AluSg SINE Alu -33 277 1 30 27 0 0 chr2 53067298 53067335 -197620519 + AT_rich Low_complexity Low_complexity 1 37 0 285 303 0 0 chr2 53067582 53067658 -197620196 + MER115 DNA AcHobo 1 65 -628 1291 345 56 10 chr2 53068377 53068876 -197618978 - MLT1G1 LTR MaLR -2 593 72 2206 107 0 0 chr2 53069290 53069581 -197618273 + AluSq SINE Alu 1 291 -22 294 29 0 0 chr2 53069584 53069619 -197618235 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 189 349 18 28 chr2 53069624 53069733 -197618121 - MIR SINE MIR -81 127 20 23 33 0 0 chr2 53069826 53069856 -197617998 + AT_rich Low_complexity Low_complexity 1 30 0 217 321 97 30 chr2 53070507 53070641 -197617213 - MIR SINE MIR 0 262 120 25 0 0 0 chr2 53071272 53071297 -197616557 + AT_rich Low_complexity Low_complexity 1 25 0 281 139 89 10 chr2 53071424 53071525 -197616329 + (TA)n Simple_repeat Simple_repeat 2 110 0 245 313 0 0 chr2 53071830 53071929 -197615925 - L1MC/D LINE L1 -1976 5832 5734 228 349 27 55 chr2 53072176 53072322 -197615532 + L3 LINE CR1 1215 1356 -221 441 316 26 16 chr2 53072382 53072572 -197615282 + L1ME1 LINE L1 40 231 -6165 * 1928 252 60 19 chr2 53072564 53073683 -197614171 + L1ME1 LINE L1 1846 2976 -3239 3327 267 94 20 chr2 53073689 53073895 -197613959 + L1ME1 LINE L1 3590 3779 -2456 1455 204 21 3 chr2 53073895 53074184 -197613670 + AluJo SINE Alu 4 297 -15 3327 267 94 20 chr2 53074184 53074267 -197613587 + L1ME1 LINE L1 3779 3854 -2381 2415 58 0 43 chr2 53074267 53074592 -197613262 - AluY SINE Alu 0 311 1 3327 267 94 20 chr2 53074592 53074665 -197613189 + L1ME1 LINE L1 3854 3920 -2315 288 53 0 0 chr2 53074665 53074703 -197613151 + (CA)n Simple_repeat Simple_repeat 2 39 0 3327 267 94 20 chr2 53074703 53076713 -197611141 + L1ME1 LINE L1 3920 6173 -62 2119 99 3 0 chr2 53076713 53077036 -197610818 + AluSx SINE Alu 1 324 0 3327 267 94 20 chr2 53077036 53077099 -197610755 + L1ME1 LINE L1 6173 6230 -5 224 154 19 0 chr2 53077477 53077529 -197610325 + A-rich Low_complexity Low_complexity 3 55 0 246 372 60 53 chr2 53079088 53079574 -197608280 - L2 LINE L2 -8 3305 2817 405 90 0 0 chr2 53080255 53080322 -197607532 + (TC)n Simple_repeat Simple_repeat 2 68 0 698 158 39 16 chr2 53080493 53080620 -197607234 + THE1B LTR MaLR 1 130 -234 269 82 20 0 chr2 53080620 53080669 -197607185 + (TA)n Simple_repeat Simple_repeat 1 50 0 210 139 0 0 chr2 53080670 53080706 -197607148 + (TG)n Simple_repeat Simple_repeat 1 36 0 2238 66 0 3 chr2 53081431 53081717 -197606137 + AluY SINE Alu 17 301 -10 635 311 44 24 chr2 53081841 53082089 -197605765 - MIR SINE MIR -4 258 6 2415 111 34 0 chr2 53082262 53082614 -197605240 + THE1B LTR MaLR 1 364 0 187 333 133 0 chr2 53082810 53082930 -197604924 - L2 LINE L2 -1 3312 3177 673 274 47 44 chr2 53083217 53083579 -197604275 - L1ME LINE L1 -4822 1562 1200 217 161 97 16 chr2 53083597 53083659 -197604195 + (TATAA)n Simple_repeat Simple_repeat 2 68 0 1072 272 83 42 chr2 53083681 53084273 -197603581 - L1ME LINE L1 -5069 1303 688 533 296 47 24 chr2 53084296 53084509 -197603345 - L1ME LINE L1 -5748 624 407 22 35 0 0 chr2 53084845 53084874 -197602980 + AT_rich Low_complexity Low_complexity 1 29 0 220 290 84 30 chr2 53085212 53085343 -197602511 - MIR SINE MIR -12 250 113 27673 64 2 1 chr2 53085971 53089615 -197598239 - L1PA5 LINE L1 -1282 4864 1217 7082 49 8 1 chr2 53089621 53090915 -197596939 + L1PA5 LINE L1 4851 6153 -1 247 143 18 18 chr2 53092567 53092623 -197595231 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 200 239 11 22 chr2 53092807 53092899 -197594955 + (TA)n Simple_repeat Simple_repeat 1 91 0 1690 238 41 2 chr2 53093336 53093798 -197594056 - Charlie4a DNA MER1_type -4 504 25 269 314 91 0 chr2 53093879 53094000 -197593854 - MIR SINE MIR -14 248 117 195 314 0 20 chr2 53094165 53094216 -197593638 - MIR SINE MIR -139 69 20 180 0 0 0 chr2 53094216 53094236 -197593618 + (A)n Simple_repeat Simple_repeat 1 20 0 182 328 16 0 chr2 53094850 53094911 -197592943 - L2 LINE L2 -219 3053 2992 210 91 0 0 chr2 53096643 53096676 -197591178 + (TA)n Simple_repeat Simple_repeat 1 33 0 28 61 0 0 chr2 53098095 53098144 -197589710 + AT_rich Low_complexity Low_complexity 1 49 0 186 133 0 0 chr2 53098292 53098322 -197589532 + (TA)n Simple_repeat Simple_repeat 1 30 0 2110 125 0 0 chr2 53098323 53098618 -197589236 - AluSc SINE Alu -14 295 1 425 33 0 17 chr2 53098847 53098907 -197588947 + (CA)n Simple_repeat Simple_repeat 2 60 0 21 0 0 0 chr2 53099073 53099094 -197588760 + AT_rich Low_complexity Low_complexity 1 21 0 2159 120 0 0 chr2 53099794 53100103 -197587751 + AluSg SINE Alu 1 309 -1 1012 132 71 185 chr2 53100329 53100669 -197587185 + AluJo SINE Alu 2 302 0 64 57 0 0 chr2 53101161 53101267 -197586587 + AT_rich Low_complexity Low_complexity 1 106 0 439 370 78 13 chr2 53101482 53101855 -197585999 + L3 LINE CR1 1171 1567 -10 2357 123 13 13 chr2 53101867 53102240 -197585614 + THE1C LTR MaLR 1 373 -2 8654 131 34 65 chr2 53102242 53103871 -197583983 + THE1C-int LTR MaLR 1 1580 0 2350 127 13 19 chr2 53103871 53104248 -197583606 + THE1C LTR MaLR 1 375 0 22 80 0 0 chr2 53106465 53106515 -197581339 + AT_rich Low_complexity Low_complexity 1 50 0 309 292 130 22 chr2 53106876 53107061 -197580793 - L1ME4a LINE L1 -157 5964 5760 18677 30 3 0 chr2 53107196 53110211 -197577643 - L1PA3 LINE L1 -3 6152 3130 1615 180 3 42 chr2 53110627 53110938 -197576916 - AluJo SINE Alu -11 301 3 455 329 99 41 chr2 53111047 53111621 -197576233 - L2 LINE L2 -81 3232 2638 1764 212 9 17 chr2 53111633 53112100 -197575754 - MLT2B1 LTR ERVL -8 512 1 7491 144 46 11 chr2 53112100 53113379 -197574475 - ERVL-B1 LTR ERVL -7 5757 4434 694 299 88 8 chr2 53113379 53113630 -197574224 - L2 LINE L2 -668 2646 2376 4783 119 30 57 chr2 53114169 53115071 -197572783 - L1MA2 LINE L1 -4 7719 6842 1023 158 43 0 chr2 53115071 53115235 -197572619 - AluSg/x SINE Alu -17 295 125 501 208 0 0 chr2 53115237 53115357 -197572497 - L1MA2 LINE L1 -1409 6156 6037 * 9842 173 49 10 chr2 53115350 53117373 -197570481 - L1MA2 LINE L1 -5315 2250 144 29774 128 19 35 chr2 53117374 53123627 -197564227 + L1PA7 LINE L1 1 6151 -3 5391 123 16 11 chr2 53123658 53124512 -197563342 + L1PB1 LINE L1 4938 5796 -355 419 0 20 0 chr2 53124512 53124563 -197563291 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 5391 123 16 11 chr2 53124563 53124918 -197562936 + L1PB1 LINE L1 5796 6148 -3 646 178 30 22 chr2 53124944 53125079 -197562775 - L1MA2 LINE L1 -7407 158 23 263 288 12 0 chr2 53125142 53125222 -197562632 + CT-rich Low_complexity Low_complexity 3 83 0 302 325 84 70 chr2 53125394 53125883 -197561971 - L1M4 LINE L1 -1951 4195 3700 33 56 0 0 chr2 53126215 53126269 -197561585 + AT_rich Low_complexity Low_complexity 1 54 0 28 61 0 0 chr2 53126531 53126580 -197561274 + AT_rich Low_complexity Low_complexity 1 49 0 38 81 0 0 chr2 53126726 53126813 -197561041 + AT_rich Low_complexity Low_complexity 1 87 0 24 53 0 0 chr2 53126901 53126939 -197560915 + AT_rich Low_complexity Low_complexity 1 38 0 26 64 0 0 chr2 53127025 53127072 -197560782 + AT_rich Low_complexity Low_complexity 1 47 0 306 354 7 0 chr2 53127217 53127361 -197560493 - HAL1 LINE L1 -835 1672 1528 1686 215 109 41 chr2 53127903 53128162 -197559692 + L1MDb LINE L1 845 1085 -5321 2181 95 27 0 chr2 53128162 53128456 -197559398 + AluSc SINE Alu 1 302 -7 1686 215 109 41 chr2 53128456 53129022 -197558832 + L1MDb LINE L1 1085 1742 -4664 2098 141 36 30 chr2 53129137 53129499 -197558355 - THE1B LTR MaLR 0 364 1 2611 113 2 31 chr2 53129504 53129918 -197557936 - THE1B-int LTR MaLR -6 1574 1173 * 5703 213 31 24 chr2 53129917 53131540 -197556314 - L1MC1 LINE L1 -222 6391 4740 2006 131 0 6 chr2 53131540 53131853 -197556001 - AluY SINE Alu 0 311 1 5703 213 31 24 chr2 53131853 53132708 -197555146 - L1MC1 LINE L1 -1873 4740 3892 849 159 8 0 chr2 53132730 53132862 -197554992 + Tigger3(Golem) DNA MER2_type 2897 3029 0 6905 170 97 44 chr2 53132862 53134658 -197553196 - L1MC1 LINE L1 -4015 2411 520 374 379 54 26 chr2 53134733 53135124 -197552730 - MER89-int LTR ERV1 -3273 3528 3127 619 302 41 16 chr2 53135468 53135710 -197552144 + L1MEc LINE L1 367 614 -6107 1107 212 83 39 chr2 53136222 53136609 -197551245 - LTR37A LTR ERV1 -10 416 13 247 286 0 24 chr2 53137232 53137316 -197550538 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 288 266 165 9 chr2 53138810 53138919 -197548935 + MIR SINE MIR 32 157 -105 196 320 64 64 chr2 53138967 53139092 -197548762 - MIR SINE MIR -108 154 30 319 345 58 29 chr2 53139092 53139263 -197548591 + MIR SINE MIR 29 204 -58 234 139 23 47 chr2 53139265 53139351 -197548503 + (TA)n Simple_repeat Simple_repeat 2 85 0 43 20 0 0 chr2 53139448 53139498 -197548356 + AT_rich Low_complexity Low_complexity 1 50 0 725 294 71 71 chr2 53140389 53140811 -197547043 + MLT1H LTR MaLR 1 422 -127 243 88 0 0 chr2 53140853 53140887 -197546967 + (TC)n Simple_repeat Simple_repeat 1 34 0 342 0 0 0 chr2 53140887 53140925 -197546929 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 284 102 0 17 chr2 53140936 53140995 -197546859 + (TA)n Simple_repeat Simple_repeat 1 58 0 216 226 0 32 chr2 53141599 53141661 -197546193 + GA-rich Low_complexity Low_complexity 4 63 0 345 289 56 53 chr2 53141820 53142142 -197545712 + L1MEc LINE L1 1306 1628 -4902 190 190 17 17 chr2 53142184 53142242 -197545612 + GA-rich Low_complexity Low_complexity 2 59 0 239 252 27 0 chr2 53142289 53142400 -197545454 + A-rich Low_complexity Low_complexity 2 115 0 269 266 119 11 chr2 53142468 53142645 -197545209 + L1MEc LINE L1 1847 2042 -4498 3394 139 10 73 chr2 53142722 53143419 -197544435 + MER39B LTR ERV1 1 653 0 22 0 0 0 chr2 53143544 53143566 -197544288 + AT_rich Low_complexity Low_complexity 1 22 0 461 287 77 65 chr2 53143758 53144189 -197543665 + L1MEc LINE L1 2535 2976 -3564 9486 29 0 0 chr2 53144189 53146093 -197541761 + L1PA3 LINE L1 4243 6150 -5 461 287 77 65 chr2 53146093 53146256 -197541598 + L1MEc LINE L1 2976 3136 -3404 217 314 24 57 chr2 53146596 53146720 -197541134 + MIR SINE MIR 34 153 -109 1013 218 13 75 chr2 53146798 53146887 -197540967 - MER8 DNA MER2_type -10 229 136 1212 231 7 20 chr2 53146887 53147185 -197540669 + AluJo SINE Alu 1 294 -8 1013 218 13 75 chr2 53147185 53147334 -197540520 - MER8 DNA MER2_type -103 136 6 4756 184 13 33 chr2 53149429 53150477 -197537377 + L1MEc LINE L1 3735 4761 -1779 639 296 0 0 chr2 53150477 53150636 -197537218 - MER52A LTR ERV1 0 1755 1597 229 335 76 19 chr2 53150671 53150829 -197537025 - MER52A LTR ERV1 -298 1457 1291 920 182 65 113 chr2 53150916 53151368 -197536486 - MER52A LTR ERV1 -523 1232 663 4012 157 17 3 chr2 53151373 53153209 -197534645 + L1MA2 LINE L1 4758 6698 0 815 228 62 67 chr2 53153212 53153270 -197534584 - MER69 DNA AcHobo -63 2463 2406 2077 121 3 13 chr2 53153270 53153568 -197534286 - AluSq SINE Alu -18 295 1 815 228 62 67 chr2 53153568 53153957 -197533897 - MER69 DNA AcHobo -120 2406 2018 563 244 15 7 chr2 53154074 53154209 -197533645 + MLT1C LTR MaLR 35 170 -297 265 98 0 0 chr2 53154209 53154250 -197533604 + L1PA4 LINE L1 5865 5905 -250 3216 52 43 2 chr2 53154250 53154672 -197533182 + L1PA5 LINE L1 5714 6152 -2 1012 214 23 68 chr2 53154674 53154982 -197532872 + MLT1C LTR MaLR 174 467 0 1558 241 141 30 chr2 53155011 53155514 -197532340 + MLT1F1 LTR MaLR 1 559 -8 491 320 85 0 chr2 53155524 53155724 -197532130 - MER69 DNA AcHobo -569 657 441 641 236 19 99 chr2 53155863 53156075 -197531779 - MER69 DNA AcHobo -2330 196 2 1071 290 80 26 chr2 53156629 53157081 -197530773 + L1MCa LINE L1 141 616 -5948 2188 124 48 25 chr2 53157170 53157526 -197530328 + THE1B LTR MaLR 1 364 0 5137 121 9 1 chr2 53157526 53158288 -197529566 + THE1B-int LTR MaLR 1 768 -812 370 143 29 0 chr2 53158292 53158362 -197529492 + THE1B-int LTR MaLR 1509 1580 0 2051 118 53 28 chr2 53158362 53158717 -197529137 + THE1B LTR MaLR 1 364 0 2323 238 122 32 chr2 53158722 53160612 -197527242 + L1MCa LINE L1 491 2711 -3853 1920 129 7 7 chr2 53160612 53160907 -197526947 + AluSx SINE Alu 1 295 -17 2323 238 122 32 chr2 53160907 53161100 -197526754 + L1MCa LINE L1 2711 2885 -3679 359 80 0 0 chr2 53161149 53161199 -197526655 + MADE1 DNA Mariner 31 80 0 601 239 44 13 chr2 53161199 53161425 -197526429 + L1MCa LINE L1 3231 3463 -3101 * 4172 248 34 10 chr2 53161422 53162651 -197525203 + L1MCa LINE L1 4053 5311 -1253 1451 105 141 10 chr2 53162656 53163008 -197524846 + LTR12 LTR ERV1 31 2002 -436 306 302 9 0 chr2 53163008 53163124 -197524730 + LTR30 LTR ERV1 526 642 -80 929 176 26 82 chr2 53163125 53163358 -197524496 + LTR12 LTR ERV1 480 699 -15 3432 186 29 39 chr2 53163360 53164301 -197523553 + L1MC2 LINE L1 5282 6335 -9 23 20 7 0 chr2 53164306 53164373 -197523481 + AT_rich Low_complexity Low_complexity 1 30 0 257 256 0 0 chr2 53164616 53164694 -197523160 - L1MC4 LINE L1 -1351 6691 6614 313 189 91 15 chr2 53164715 53164847 -197523007 + (TTATA)n Simple_repeat Simple_repeat 3 144 0 225 145 0 97 chr2 53164850 53164912 -197522942 - LTR66 LTR ERVL -156 454 399 359 57 38 0 chr2 53164919 53164972 -197522882 + (CATATA)n Simple_repeat Simple_repeat 6 60 0 247 384 47 29 chr2 53166628 53166800 -197521054 + L2 LINE L2 2700 2874 -440 272 339 16 32 chr2 53166801 53166925 -197520929 - L2 LINE L2 0 3313 3192 261 0 0 0 chr2 53167406 53167435 -197520419 + (TA)n Simple_repeat Simple_repeat 1 29 0 651 66 0 0 chr2 53167456 53167547 -197520307 - L1PA8 LINE L1 0 6172 6082 508 210 0 0 chr2 53167643 53167743 -197520111 + FLAM_C SINE Alu 12 111 -32 1553 160 60 49 chr2 53167746 53168114 -197519740 + THE1C LTR MaLR 1 372 -3 381 22 0 0 chr2 53168789 53168835 -197519019 + (CA)n Simple_repeat Simple_repeat 2 47 0 298 171 97 44 chr2 53170470 53170595 -197517259 + L1ME3A LINE L1 5676 5801 -361 343 180 108 18 chr2 53170633 53170744 -197517110 + L1ME3A LINE L1 5984 6104 -66 555 195 8 0 chr2 53171954 53172077 -197515777 - L1MB7 LINE L1 -11 6173 6050 343 231 51 0 chr2 53172088 53172166 -197515688 + MER31A-int LTR ERV1 200 281 -4655 6458 212 74 76 chr2 53172233 53172475 -197515379 + MER31A-int LTR ERV1 179 420 -4516 2434 56 0 3 chr2 53172475 53172778 -197515076 - AluY SINE Alu -9 302 1 6458 212 74 76 chr2 53172778 53174928 -197512926 + MER31A-int LTR ERV1 420 2567 -2369 2664 218 101 73 chr2 53174928 53175931 -197511923 + MER31A-int LTR ERV1 3764 4794 -142 1919 128 81 26 chr2 53175931 53176276 -197511578 + THE1B LTR MaLR 1 364 0 10845 114 8 11 chr2 53176277 53177850 -197510004 + THE1B-int LTR MaLR 2 1568 -12 1828 158 66 17 chr2 53177877 53178224 -197509630 + THE1B LTR MaLR 1 364 0 413 125 194 0 chr2 53178225 53178297 -197509557 + MER31A-int LTR ERV1 4791 4876 -60 1886 202 8 58 chr2 53178323 53178803 -197509051 + MER31A LTR ERV1 1 456 -29 219 36 0 0 chr2 53179064 53179092 -197508762 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr2 53179960 53179981 -197507873 + AT_rich Low_complexity Low_complexity 1 21 0 1326 177 95 13 chr2 53180881 53181197 -197506657 - L1MB2 LINE L1 0 6171 5830 21 36 0 0 chr2 53181238 53181266 -197506588 + AT_rich Low_complexity Low_complexity 1 28 0 598 332 81 49 chr2 53181478 53181911 -197505943 - L2 LINE L2 -556 2758 2307 1947 113 0 77 chr2 53181911 53182238 -197505616 + AluSx SINE Alu 1 302 -10 598 332 81 49 chr2 53182238 53182274 -197505580 - L2 LINE L2 -1007 2307 2274 546 237 64 35 chr2 53182376 53182549 -197505305 - MER58A DNA MER1_type 0 224 47 574 237 73 28 chr2 53182649 53182780 -197505074 + MER5A DNA MER1_type 4 146 -43 477 0 0 0 chr2 53182780 53182833 -197505021 + (CA)n Simple_repeat Simple_repeat 2 54 0 574 237 73 28 chr2 53182833 53182878 -197504976 + MER5A DNA MER1_type 146 188 -1 191 357 77 44 chr2 53182888 53183070 -197504784 + MER5A DNA MER1_type 2 189 0 28 0 0 0 chr2 53183863 53183891 -197503963 + AT_rich Low_complexity Low_complexity 1 28 0 1776 166 13 3 chr2 53184201 53184502 -197503352 + AluSq SINE Alu 1 304 -9 1997 148 0 7 chr2 53184831 53185135 -197502719 - AluSx SINE Alu -10 302 1 448 237 52 0 chr2 53185430 53185527 -197502327 - MER5A DNA MER1_type -84 105 4 1760 192 17 41 chr2 53185678 53186160 -197501694 + MER89 LTR ERV1 27 559 0 333 280 75 9 chr2 53186160 53186267 -197501587 + MIR SINE MIR 64 177 -85 411 324 27 14 chr2 53187016 53187164 -197500690 - MIR SINE MIR -111 151 2 21 71 0 0 chr2 53188907 53188949 -197498905 + AT_rich Low_complexity Low_complexity 1 42 0 447 337 127 42 chr2 53188990 53189487 -197498367 - L2 LINE L2 -163 3150 2613 451 326 45 9 chr2 53189488 53189712 -197498142 - L2 LINE L2 -1882 1432 1201 234 322 171 26 chr2 53190901 53191053 -197496801 + MIR SINE MIR 23 196 -66 21 36 0 0 chr2 53191083 53191111 -197496743 + AT_rich Low_complexity Low_complexity 1 28 0 727 341 114 25 chr2 53192800 53193240 -197494614 + L3 LINE CR1 1086 1564 -13 24 77 0 0 chr2 53193572 53193624 -197494230 + AT_rich Low_complexity Low_complexity 1 52 0 2436 54 0 3 chr2 53194151 53194449 -197493405 - AluY SINE Alu -14 297 1 262 354 20 20 chr2 53195567 53195714 -197492140 + L3 LINE CR1 1050 1196 -381 187 388 119 0 chr2 53195801 53195935 -197491919 + L3 LINE CR1 1374 1523 -54 248 336 66 25 chr2 53196276 53196398 -197491456 - L2 LINE L2 -5 3267 3141 222 369 6 45 chr2 53196502 53196681 -197491173 - L2 LINE L2 -195 3077 2906 958 321 34 11 chr2 53197941 53198293 -197489561 - MER69 DNA AcHobo -705 521 162 598 203 114 38 chr2 53198452 53198610 -197489244 - AluSg/x SINE Alu -15 297 128 405 245 19 0 chr2 53198622 53198777 -197489077 + (TA)n Simple_repeat Simple_repeat 1 158 0 501 230 0 0 chr2 53198777 53198864 -197488990 - AluJb SINE Alu -190 122 36 407 330 15 15 chr2 53199134 53199175 -197488679 + L2 LINE L2 3116 3156 -157 1705 164 30 7 chr2 53199175 53199474 -197488380 - AluSx SINE Alu -4 308 3 407 330 15 15 chr2 53199474 53199629 -197488225 + L2 LINE L2 3155 3312 -1 501 196 11 0 chr2 53199735 53199827 -197488027 - Tigger7 DNA MER2_type 0 2587 2495 * 2866 174 35 10 chr2 53199825 53200288 -197487566 - Tigger7 DNA MER2_type -212 521 42 1669 127 8 4 chr2 53200288 53200555 -197487299 + L1PB1 LINE L1 5876 6143 -8 2866 174 35 10 chr2 53200555 53200598 -197487256 - Tigger7 DNA MER2_type -691 42 2 32 75 0 0 chr2 53201846 53201913 -197485941 + AT_rich Low_complexity Low_complexity 1 67 0 403 307 27 27 chr2 53201974 53202124 -197485730 + MIR SINE MIR 2 151 -111 419 226 8 0 chr2 53202174 53202307 -197485547 + (TA)n Simple_repeat Simple_repeat 1 134 0 255 207 60 17 chr2 53202456 53202572 -197485282 + (TA)n Simple_repeat Simple_repeat 2 122 0 23 54 0 0 chr2 53202654 53202691 -197485163 + AT_rich Low_complexity Low_complexity 1 37 0 1278 269 90 73 chr2 53202781 53203290 -197484564 + L2 LINE L2 2194 2693 -620 2352 63 0 22 chr2 53203290 53203605 -197484249 + AluY SINE Alu 1 308 -3 1278 269 90 73 chr2 53203605 53204191 -197483663 + L2 LINE L2 2693 3313 0 372 358 101 0 chr2 53206472 53206690 -197481164 + MIR SINE MIR 18 257 -5 213 409 36 0 chr2 53206794 53206904 -197480950 + L3 LINE CR1 191 304 -1273 1124 232 46 11 chr2 53207060 53207431 -197480423 - Zaphod DNA AcHobo -61 3970 3587 53 81 0 0 chr2 53207458 53207581 -197480273 + AT_rich Low_complexity Low_complexity 1 123 0 1039 250 56 90 chr2 53207631 53208151 -197479703 - L1MC4 LINE L1 -1 8041 7546 204 97 0 0 chr2 53208151 53208182 -197479672 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1039 250 56 90 chr2 53208182 53208305 -197479549 - L1MC4 LINE L1 -496 7546 7420 1433 216 60 17 chr2 53208317 53208669 -197479185 - MLT1A2 LTR MaLR -2 372 6 475 254 45 0 chr2 53208767 53208901 -197478953 - L1MC/D LINE L1 -2067 5741 5602 205 270 20 33 chr2 53209257 53209409 -197478445 + T-rich Low_complexity Low_complexity 4 153 0 229 325 75 17 chr2 53209429 53209721 -197478133 - L1M4 LINE L1 -3139 3007 2699 450 101 0 0 chr2 53209723 53209792 -197478062 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 1474 199 21 18 chr2 53209792 53210074 -197477780 - AluJb SINE Alu -29 283 1 235 191 114 9 chr2 53210084 53210189 -197477665 - Zaphod DNA AcHobo -3235 796 681 235 254 0 0 chr2 53210290 53210345 -197477509 - MER20 DNA MER1_type 0 219 165 440 284 46 44 chr2 53210525 53210765 -197477089 - L1ME LINE L1 -455 5707 5467 180 331 238 39 chr2 53211218 53211499 -197476355 + L3 LINE CR1 1235 1571 -6 24 53 0 0 chr2 53211538 53211576 -197476278 + AT_rich Low_complexity Low_complexity 1 38 0 392 307 94 73 chr2 53211648 53212085 -197475769 - L1ME4a LINE L1 -102 6019 5574 436 327 59 33 chr2 53212089 53212242 -197475612 - L2 LINE L2 0 3272 3116 528 306 54 45 chr2 53212315 53212537 -197475317 - MIR SINE MIR -27 235 12 8708 127 75 44 chr2 53213568 53215212 -197472642 - pTR5 LTR ERV1 0 2438 743 203 325 171 0 chr2 53215490 53215613 -197472241 + L3b LINE CR1 1434 1577 -6 3532 185 43 3 chr2 53216097 53216752 -197471102 - MER54B LTR ERVL -112 681 1 368 293 72 48 chr2 53223106 53223314 -197464540 + MLT1K LTR MaLR 375 587 -1 402 211 12 0 chr2 53224485 53224580 -197463274 - L1MD3 LINE L1 -8 7987 7680 725 255 93 32 chr2 53225533 53225780 -197462074 + MSTD LTR MaLR 135 396 0 22 0 0 0 chr2 53226402 53226424 -197461430 + AT_rich Low_complexity Low_complexity 1 22 0 1888 131 3 6 chr2 53227299 53227613 -197460241 - HSMAR2 DNA Mariner -2 1300 988 337 279 18 9 chr2 53227971 53228082 -197459772 - MIR SINE MIR -1 261 150 10143 139 30 8 chr2 53228092 53229734 -197458120 - L1PBa LINE L1 -5185 1678 1 386 264 27 9 chr2 53229743 53229853 -197458001 + MIR SINE MIR 150 261 -1 21 0 0 0 chr2 53230995 53231016 -197456838 + AT_rich Low_complexity Low_complexity 1 21 0 934 162 109 5 chr2 53231113 53231323 -197456531 - L1MCb LINE L1 -4886 1021 790 1822 249 48 35 chr2 53231346 53231460 -197456394 - L1MCb LINE L1 -5801 625 514 1624 88 8 38 chr2 53231460 53231700 -197456154 - AluSc SINE Alu -5 304 72 1822 249 48 35 chr2 53231700 53232183 -197455671 - L1MCb LINE L1 -5912 514 20 797 280 132 41 chr2 53232310 53232703 -197455151 + MLT1J2 LTR MaLR 22 450 0 250 385 54 23 chr2 53232918 53233048 -197454806 + L2 LINE L2 2941 3074 -198 259 317 237 11 chr2 53233644 53233830 -197454024 + MIR SINE MIR 3 230 -32 241 211 0 0 chr2 53235779 53235836 -197452018 + L1MC4 LINE L1 6647 6703 -1339 183 205 0 0 chr2 53236619 53236658 -197451196 + (TATATG)n Simple_repeat Simple_repeat 1 39 0 3286 146 6 22 chr2 53237708 53238244 -197449610 + MER1A DNA MER1_type 1 527 0 192 40 0 0 chr2 53238474 53238499 -197449355 + (TA)n Simple_repeat Simple_repeat 2 26 0 189 242 70 127 chr2 53238588 53238745 -197449109 - L2 LINE L2 -8 3305 3158 13059 126 110 19 chr2 53239081 53240974 -197446880 + L1PB1 LINE L1 2 2154 -4709 180 0 0 0 chr2 53240974 53240994 -197446860 + (CAA)n Simple_repeat Simple_repeat 2 21 0 13059 126 110 19 chr2 53240994 53241456 -197446398 + L1PB1 LINE L1 2154 2572 -4291 4327 67 27 34 chr2 53241456 53242507 -197445347 + MER11A LTR ERVK 3 1266 0 13002 182 45 15 chr2 53242507 53246585 -197441269 + L1PB1 LINE L1 2568 6788 -79 226 278 42 14 chr2 53246641 53246713 -197441141 - L1ME3A LINE L1 -99 6054 5981 848 262 70 34 chr2 53246819 53247297 -197440557 - L1ME3A LINE L1 -316 5837 5314 2357 273 122 40 chr2 53247302 53247376 -197440478 - L1ME3A LINE L1 -1460 4669 4602 198 71 0 0 chr2 53247376 53247404 -197440450 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 2357 273 122 40 chr2 53247404 53248016 -197439838 - L1ME3A LINE L1 -1527 4602 4041 901 158 41 6 chr2 53248016 53248187 -197439667 + L1PA13 LINE L1 5985 6161 -2 2357 273 122 40 chr2 53248187 53248393 -197439461 - L1ME3A LINE L1 -2088 4041 3853 402 21 0 0 chr2 53248393 53248440 -197439414 + (TG)n Simple_repeat Simple_repeat 2 48 0 2357 273 122 40 chr2 53248440 53249452 -197438402 - L1ME3A LINE L1 -2276 3853 2529 2483 60 0 3 chr2 53249452 53249752 -197438102 - AluY SINE Alu -12 299 1 2357 273 122 40 chr2 53249752 53250216 -197437638 - L1ME3A LINE L1 -3600 2529 2104 25 31 0 0 chr2 53250269 53250301 -197437553 + AT_rich Low_complexity Low_complexity 1 32 0 3126 189 15 27 chr2 53250350 53251019 -197436835 + MER39 LTR ERV1 1 702 -5 184 140 75 0 chr2 53251178 53251285 -197436569 + (TA)n Simple_repeat Simple_repeat 2 116 0 20708 188 32 26 chr2 53251285 53253694 -197434160 - L1PA11 LINE L1 -6 7606 5214 234 0 0 0 chr2 53253694 53253720 -197434134 + (TTG)n Simple_repeat Simple_repeat 3 28 0 20708 188 32 26 chr2 53253720 53258073 -197429781 - L1PA11 LINE L1 -2398 5214 10 287 299 139 39 chr2 53258113 53258622 -197429232 - L1ME3A LINE L1 -4579 1731 1172 454 324 97 50 chr2 53258625 53259122 -197428732 - L1ME3A LINE L1 -5032 1087 568 511 268 136 26 chr2 53260047 53260129 -197427725 + MIR SINE MIR 9 81 -181 1941 182 70 22 chr2 53260129 53260575 -197427279 + MLT1C LTR MaLR 1 467 0 511 268 136 26 chr2 53260575 53260720 -197427134 + MIR SINE MIR 81 261 -1 279 353 17 8 chr2 53261141 53261260 -197426594 + MIR3 SINE MIR 50 169 -39 209 369 19 0 chr2 53262111 53262214 -197425640 - L3 LINE CR1 -379 1198 1094 22 0 0 0 chr2 53262383 53262405 -197425449 + AT_rich Low_complexity Low_complexity 1 22 0 497 191 9 19 chr2 53264625 53264849 -197423005 + CT-rich Low_complexity Low_complexity 1 221 0 269 269 21 76 chr2 53265232 53265377 -197422477 + MIR SINE MIR 80 216 -46 294 247 12 12 chr2 53265704 53265785 -197422069 - MLT1H-int LTR MaLR -1276 95 15 271 361 23 0 chr2 53265803 53265936 -197421918 - MLT1H LTR MaLR -5 585 450 466 256 193 22 chr2 53266046 53266269 -197421585 - MLT1H LTR MaLR -286 263 3 227 224 0 0 chr2 53266455 53266504 -197421350 + L2 LINE L2 3265 3313 0 1820 141 23 10 chr2 53266748 53267053 -197420801 - L1PA15 LINE L1 0 6165 5857 2127 109 0 0 chr2 53267925 53268252 -197419602 - AluSx SINE Alu 0 327 1 409 0 39 0 chr2 53269039 53269091 -197418763 + L1PA6 LINE L1 6101 6154 0 1034 109 0 0 chr2 53269091 53269236 -197418618 + L1PB1 LINE L1 6003 6149 -2 297 0 0 0 chr2 53269254 53269287 -197418567 + (TA)n Simple_repeat Simple_repeat 1 33 0 2219 95 0 0 chr2 53270316 53270634 -197417220 - AluY SINE Alu 0 318 1 1996 93 0 31 chr2 53270756 53271046 -197416808 + AluY SINE Alu 31 311 0 253 239 0 28 chr2 53271172 53271243 -197416611 + GA-rich Low_complexity Low_complexity 4 72 0 242 362 59 13 chr2 53272781 53272933 -197414921 - MIR3 SINE MIR 0 208 50 300 128 0 0 chr2 53272938 53272985 -197414869 + L1ME LINE L1 5725 5771 -393 247 289 99 46 chr2 53273029 53273181 -197414673 - MLT1K LTR MaLR -414 174 15 500 296 106 16 chr2 53273453 53273667 -197414187 - MIR SINE MIR -18 244 15 396 278 86 69 chr2 53274506 53274894 -197412960 - LTR33A LTR ERVL -8 515 37 189 268 37 37 chr2 53274987 53275069 -197412785 - L3b LINE CR1 -131 1452 1371 21 57 0 0 chr2 53275070 53275105 -197412749 + AT_rich Low_complexity Low_complexity 1 35 0 238 327 196 26 chr2 53275727 53275775 -197412079 + LTR16C LTR ERVL 181 220 -271 2122 134 0 0 chr2 53275775 53276074 -197411780 - AluSq SINE Alu -14 299 1 238 327 196 26 chr2 53276074 53276291 -197411563 + LTR16C LTR ERVL 220 491 0 224 125 0 54 chr2 53276304 53276360 -197411494 + (TTTTTA)n Simple_repeat Simple_repeat 3 55 0 186 253 108 72 chr2 53276448 53276531 -197411323 - MIR SINE MIR -90 172 87 615 249 91 19 chr2 53277805 53278014 -197409840 + MER58A DNA MER1_type 1 224 0 207 100 0 0 chr2 53278715 53278745 -197409109 + (T)n Simple_repeat Simple_repeat 1 30 0 2881 178 10 27 chr2 53278748 53279271 -197408583 - MER72 LTR ERV1 -208 514 1 1885 207 103 74 chr2 53279271 53279904 -197407950 - MER72-int LTR ERV1 -1 6757 6107 528 337 6 12 chr2 53279943 53280112 -197407742 - MIR3 SINE MIR -24 184 17 23 0 0 0 chr2 53280158 53280181 -197407673 + AT_rich Low_complexity Low_complexity 1 23 0 2183 96 3 0 chr2 53280219 53280532 -197407322 - AluY SINE Alu 0 314 1 271 307 44 66 chr2 53281059 53281196 -197406658 - L3 LINE CR1 -127 1450 1317 213 305 129 13 chr2 53284278 53284421 -197403433 - MIR SINE MIR -75 133 35 259 274 89 16 chr2 53284510 53284634 -197403220 - HAL1b LINE L1 -2 1346 1214 392 246 33 8 chr2 53284670 53284792 -197403062 - MLT1A1 LTR MaLR -50 315 191 517 243 126 33 chr2 53284805 53285131 -197402723 - LTR43 LTR ERV1 -59 470 187 847 142 18 71 chr2 53285491 53285616 -197402238 - MLT1A1 LTR MaLR -205 160 45 2101 116 34 0 chr2 53285616 53285908 -197401946 - AluSx SINE Alu -10 302 1 847 142 18 71 chr2 53285908 53285951 -197401903 - MLT1A1 LTR MaLR -320 45 1 214 267 11 22 chr2 53286244 53286334 -197401520 + GA-rich Low_complexity Low_complexity 1 89 0 1612 226 18 28 chr2 53287195 53287385 -197400469 - MLT1B LTR MaLR -5 385 195 2190 117 3 3 chr2 53287385 53287685 -197400169 - AluSx SINE Alu -12 300 1 1612 226 18 28 chr2 53287685 53287883 -197399971 - MLT1B LTR MaLR -195 195 1 313 303 176 24 chr2 53288620 53288785 -197399069 - HERV16 LTR ERVL -1803 3961 3732 1701 337 56 14 chr2 53289257 53290604 -197397250 - HERV16 LTR ERVL -2178 2818 1682 2379 321 72 50 chr2 53290645 53291770 -197396084 - HERV16 LTR ERVL -3420 1576 409 2102 108 3 11 chr2 53291770 53292078 -197395776 + AluSq SINE Alu 1 306 0 2379 321 72 50 chr2 53292078 53292447 -197395407 - HERV16 LTR ERVL -4587 409 49 579 347 68 41 chr2 53292500 53292890 -197394964 - LTR16A LTR ERVL -18 432 43 3220 27 0 0 chr2 53292950 53293321 -197394533 - L1PA3 LINE L1 -288 5867 5497 1062 60 0 0 chr2 53293321 53293450 -197394404 + L1PA3 LINE L1 6017 6149 -6 302 206 59 39 chr2 53295329 53295431 -197392423 + MIR SINE MIR 52 155 -107 229 337 54 0 chr2 53295775 53295867 -197391987 + MIR SINE MIR 100 196 -66 2966 134 14 26 chr2 53295917 53296176 -197391678 + LTR26E LTR ERV1 135 396 -226 2421 132 19 8 chr2 53296176 53296547 -197391307 - THE1C LTR MaLR 0 375 1 10191 112 53 4 chr2 53296547 53298052 -197389802 - THE1C-int LTR MaLR 0 1580 2 2031 146 83 11 chr2 53298053 53298403 -197389451 - THE1C LTR MaLR 0 375 1 2966 134 14 26 chr2 53298403 53298634 -197389220 + LTR26E LTR ERV1 394 622 0 23 54 0 0 chr2 53298912 53298949 -197388905 + AT_rich Low_complexity Low_complexity 1 37 0 771 230 129 30 chr2 53299925 53300286 -197387568 - L1M4 LINE L1 -5112 1430 1017 23 0 0 0 chr2 53302050 53302073 -197385781 + AT_rich Low_complexity Low_complexity 1 23 0 263 317 20 10 chr2 53302231 53302332 -197385522 + MIR SINE MIR 53 154 -108 188 200 17 0 chr2 53302338 53302398 -197385456 + (TA)n Simple_repeat Simple_repeat 1 61 0 218 284 0 0 chr2 53302445 53302512 -197385342 + MIR SINE MIR 195 261 -1 23 33 0 0 chr2 53302605 53302635 -197385219 + AT_rich Low_complexity Low_complexity 1 30 0 1791 68 0 17 chr2 53302728 53302962 -197384892 + AluY SINE Alu 73 302 -9 196 343 89 34 chr2 53302965 53303111 -197384743 - MIR3 SINE MIR -40 168 15 472 304 88 9 chr2 53304019 53304236 -197383618 + MIR SINE MIR 29 262 0 2175 97 31 3 chr2 53304523 53304647 -197383207 + AluSc SINE Alu 1 120 -189 383 0 21 0 chr2 53304647 53304694 -197383160 + (CAAAA)n Simple_repeat Simple_repeat 5 52 0 2175 97 31 3 chr2 53304694 53304857 -197382997 + AluSc SINE Alu 120 296 -13 197 353 69 0 chr2 53304893 53304995 -197382859 + L2 LINE L2 3197 3305 -8 183 250 97 14 chr2 53305109 53305181 -197382673 - MIR3 SINE MIR -2 206 129 1284 236 128 40 chr2 53305187 53305806 -197382048 - L1MC4 LINE L1 -1 8041 7369 629 241 174 5 chr2 53305899 53306123 -197381731 - L1MC4 LINE L1 -956 7086 6825 23 33 0 0 chr2 53306191 53306221 -197381633 + AT_rich Low_complexity Low_complexity 1 30 0 252 184 0 0 chr2 53306239 53306288 -197381566 + (TA)n Simple_repeat Simple_repeat 1 49 0 27 0 0 0 chr2 53308609 53308636 -197379218 + AT_rich Low_complexity Low_complexity 1 27 0 22 56 0 0 chr2 53308656 53308692 -197379162 + AT_rich Low_complexity Low_complexity 1 36 0 1668 210 79 23 chr2 53309931 53310373 -197377481 - MLT1C LTR MaLR 0 467 1 201 250 21 0 chr2 53310881 53310929 -197376925 + (TG)n Simple_repeat Simple_repeat 2 50 0 27 96 0 0 chr2 53311206 53311289 -197376565 + AT_rich Low_complexity Low_complexity 1 83 0 257 346 10 0 chr2 53312615 53312716 -197375138 + MIR SINE MIR 161 262 0 189 107 0 0 chr2 53313048 53313076 -197374778 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2028 125 4 0 chr2 53313078 53313357 -197374497 - AluSx SINE Alu -32 280 1 22 0 0 0 chr2 53313704 53313726 -197374128 + AT_rich Low_complexity Low_complexity 1 22 0 12993 195 45 23 chr2 53314028 53320877 -197366977 + L1MA4A LINE L1 4 6993 -12 33 0 0 0 chr2 53320879 53320912 -197366942 + AT_rich Low_complexity Low_complexity 1 33 0 632 104 0 0 chr2 53322007 53322103 -197365751 + L1MA1 LINE L1 6207 6302 0 31 44 0 0 chr2 53322104 53322149 -197365705 + AT_rich Low_complexity Low_complexity 1 45 0 421 155 31 19 chr2 53323289 53323450 -197364404 + (TA)n Simple_repeat Simple_repeat 1 163 0 251 315 93 0 chr2 53323655 53323763 -197364091 + MIR SINE MIR 125 242 -20 286 224 0 15 chr2 53325029 53325163 -197362691 + (TA)n Simple_repeat Simple_repeat 2 133 0 307 143 0 0 chr2 53325206 53325262 -197362592 - L1MC4 LINE L1 -1350 6692 6637 1433 237 27 3 chr2 53325407 53325740 -197362114 + MER58B DNA MER1_type 1 341 0 2065 96 105 8 chr2 53326060 53326426 -197361428 - LTR7 LTR ERV1 0 450 1 610 197 53 0 chr2 53326644 53326776 -197361078 - MIR SINE MIR -13 249 111 21 0 0 0 chr2 53327955 53327976 -197359878 + AT_rich Low_complexity Low_complexity 1 21 0 2026 135 6 3 chr2 53327976 53328288 -197359566 + AluSq SINE Alu 1 313 0 4500 168 18 50 chr2 53328422 53329355 -197358499 - MER4D LTR ERV1 0 903 1 30 0 0 0 chr2 53330684 53330714 -197357140 + AT_rich Low_complexity Low_complexity 1 30 0 1758 191 21 6 chr2 53331222 53331552 -197356302 - MLT2B1 LTR ERVL -185 335 1 191 254 107 66 chr2 53331707 53331761 -197356093 + MIR SINE MIR 136 186 -76 216 0 0 0 chr2 53331761 53331785 -197356069 + (TG)n Simple_repeat Simple_repeat 1 24 0 191 254 107 66 chr2 53331785 53331852 -197356002 + MIR SINE MIR 186 262 0 378 284 0 35 chr2 53331860 53331976 -197355878 - L2 LINE L2 -5 3308 3197 27 49 0 0 chr2 53332478 53332519 -197355335 + AT_rich Low_complexity Low_complexity 1 41 0 219 333 18 63 chr2 53333073 53333184 -197354670 - MIR SINE MIR -109 99 1 347 208 26 0 chr2 53333237 53333314 -197354540 - MLT1G1 LTR MaLR -515 80 2 298 306 51 84 chr2 53333316 53333591 -197354263 - MLT1G1-int LTR MaLR -1 1370 1105 385 319 54 25 chr2 53334312 53334591 -197353263 - MLT1G1-int LTR MaLR -793 578 292 253 297 51 17 chr2 53334593 53334711 -197353143 - MLT1G1-int LTR MaLR -1229 142 21 467 289 127 29 chr2 53334730 53335182 -197352672 - MLT1G1 LTR MaLR -18 577 16 2220 81 7 0 chr2 53335636 53335931 -197351923 - AluY SINE Alu -14 297 1 242 200 0 0 chr2 53336349 53336389 -197351465 - L2 LINE L2 -15 3298 3259 306 263 106 97 chr2 53336542 53336892 -197350962 - L1ME2 LINE L1 -83 6081 5729 2027 158 53 120 chr2 53337703 53338246 -197349608 - MER67D LTR ERV1 -7 507 1 308 262 33 66 chr2 53338333 53338455 -197349399 + MER20 DNA MER1_type 102 219 0 303 233 52 0 chr2 53339269 53339385 -197348469 + (TTA)n Simple_repeat Simple_repeat 3 124 0 786 322 178 53 chr2 53339514 53339583 -197348271 + L2 LINE L2 1699 1758 -1555 1463 264 30 35 chr2 53339583 53340091 -197347763 + MLT1D LTR MaLR 1 505 0 786 322 178 53 chr2 53340091 53341263 -197346591 + L2 LINE L2 1758 3161 -152 1888 121 64 0 chr2 53341263 53341544 -197346310 - AluSg SINE Alu -10 300 2 786 322 178 53 chr2 53341544 53341660 -197346194 + L2 LINE L2 3161 3261 -52 6193 103 12 28 chr2 53341719 53342705 -197345149 + L1P LINE L1 4128 5097 -1049 2809 16 3 0 chr2 53343918 53344235 -197343619 - AluYb8 SINE Alu 0 318 1 503 265 16 29 chr2 53344618 53344863 -197342991 - L1MC5 LINE L1 -111 7850 7609 21 36 0 0 chr2 53345217 53345245 -197342609 + AT_rich Low_complexity Low_complexity 1 28 0 290 289 81 85 chr2 53346187 53346422 -197341432 - MIR SINE MIR -9 253 20 710 244 134 15 chr2 53347811 53348161 -197339693 + L1ME1 LINE L1 5755 6140 -24 9054 243 32 35 chr2 53348412 53350251 -197337603 + L1MB5 LINE L1 2286 4129 -2045 387 0 0 0 chr2 53350251 53350294 -197337560 + (CA)n Simple_repeat Simple_repeat 2 44 0 9054 243 32 35 chr2 53350294 53350669 -197337185 + L1MB5 LINE L1 4129 4504 -1670 1500 208 0 10 chr2 53350669 53350958 -197336896 + AluJb SINE Alu 1 286 -26 9054 243 32 35 chr2 53350958 53352634 -197335220 + L1MB5 LINE L1 4504 6166 -8 23 0 0 0 chr2 53352776 53352799 -197335055 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 53353357 53353381 -197334473 + AT_rich Low_complexity Low_complexity 1 24 0 25 51 0 0 chr2 53353444 53353483 -197334371 + AT_rich Low_complexity Low_complexity 1 39 0 220 278 61 61 chr2 53353856 53353971 -197333883 - MIR SINE MIR -2 260 146 349 333 14 43 chr2 53354024 53354162 -197333692 - MIR SINE MIR -112 150 17 28 0 0 0 chr2 53355276 53355304 -197332550 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 53355993 53356017 -197331837 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 53356990 53357025 -197330829 + AT_rich Low_complexity Low_complexity 1 35 0 243 137 157 0 chr2 53357736 53357787 -197330067 - L1ME3 LINE L1 -64 6098 6040 1625 270 53 34 chr2 53357797 53358182 -197329672 - L1ME3 LINE L1 -204 5960 5584 825 307 58 25 chr2 53358182 53358628 -197329226 - LTR16B LTR ERVL -2 462 2 1625 270 53 34 chr2 53358628 53359332 -197328522 - L1ME3 LINE L1 -580 5584 4844 526 313 120 5 chr2 53359343 53359551 -197328303 - MIR SINE MIR -27 235 4 896 98 15 0 chr2 53359713 53359846 -197328008 - L1PA11 LINE L1 -2 6172 6038 236 259 105 56 chr2 53360361 53360523 -197327331 - L1ME4a LINE L1 -6 6115 5946 215 250 0 0 chr2 53360524 53360568 -197327286 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 252 319 22 30 chr2 53361352 53361487 -197326367 - MER104 DNA Tc2 0 180 47 255 317 78 0 chr2 53361935 53362027 -197325827 - MIR SINE MIR -65 143 59 1625 178 3 48 chr2 53362201 53362515 -197325339 - AluJo SINE Alu -12 300 1 226 318 80 20 chr2 53363472 53363623 -197324231 + LTR16C LTR ERVL 332 491 0 22 0 0 0 chr2 53364259 53364281 -197323573 + AT_rich Low_complexity Low_complexity 1 22 0 273 243 14 0 chr2 53364324 53364398 -197323456 - L1MA9 LINE L1 0 6312 6238 1966 131 168 20 chr2 53364440 53364792 -197323062 - MER4A LTR ERV1 0 664 261 633 121 0 10 chr2 53364792 53364891 -197322963 - MER4A LTR ERV1 -566 98 1 2309 87 15 102 chr2 53364916 53365328 -197322526 - MER4A-int LTR ERV1 -2 6596 6221 309 75 0 0 chr2 53365333 53365373 -197322481 - MER4A LTR ERV1 -624 40 1 591 164 0 25 chr2 53365377 53365499 -197322355 - L1MA9 LINE L1 -147 6165 6047 728 354 82 36 chr2 53365693 53366635 -197321219 - L2 LINE L2 -609 2705 1808 2312 81 0 3 chr2 53366635 53366933 -197320921 - AluY SINE Alu -4 307 11 728 354 82 36 chr2 53366933 53366956 -197320898 - L2 LINE L2 -1506 1808 1788 3648 91 5 74 chr2 53366956 53367429 -197320425 + MER41A LTR ERV1 1 426 -128 2466 63 0 3 chr2 53367429 53367732 -197320122 - AluSc SINE Alu -7 302 1 3648 91 5 74 chr2 53367732 53367853 -197320001 + MER41A LTR ERV1 426 554 0 728 354 82 36 chr2 53367853 53368103 -197319751 - L2 LINE L2 -1526 1788 1433 1919 141 0 0 chr2 53368312 53368596 -197319258 - AluSq SINE Alu -29 284 1 2419 72 3 0 chr2 53369252 53369558 -197318296 + AluY SINE Alu 1 307 -4 300 212 0 0 chr2 53369959 53370025 -197317829 + GA-rich Low_complexity Low_complexity 2 67 0 629 272 51 51 chr2 53370698 53370915 -197316939 - MIR SINE MIR 0 262 46 881 320 87 33 chr2 53371063 53371454 -197316400 + LTR16C LTR ERVL 72 483 -8 214 271 41 107 chr2 53371609 53371731 -197316123 + L2 LINE L2 2949 3062 -210 32 81 0 0 chr2 53371950 53372024 -197315830 + AT_rich Low_complexity Low_complexity 1 74 0 24 67 0 0 chr2 53372190 53372235 -197315619 + AT_rich Low_complexity Low_complexity 1 45 0 22 80 0 0 chr2 53372579 53372629 -197315225 + AT_rich Low_complexity Low_complexity 1 50 0 27 0 0 0 chr2 53373651 53373678 -197314176 + AT_rich Low_complexity Low_complexity 1 27 0 806 217 19 0 chr2 53373808 53373969 -197313885 + FAM SINE Alu 5 168 -7 2128 155 77 32 chr2 53375133 53375572 -197312282 + LTR2B LTR ERV1 32 490 0 607 257 35 20 chr2 53375572 53375760 -197312094 - MER34 LTR ERV1 -351 191 1 197 33 33 0 chr2 53376705 53376735 -197311119 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 250 315 0 0 chr2 53377944 53378017 -197309837 + (TG)n Simple_repeat Simple_repeat 2 74 0 666 346 11 19 chr2 53378166 53378426 -197309428 - MIR SINE MIR -3 259 2 217 209 45 30 chr2 53378834 53378901 -197308953 - L3 LINE CR1 -73 1504 1437 491 229 29 97 chr2 53378967 53379142 -197308712 + LTR33A LTR ERVL 6 168 -355 756 229 74 13 chr2 53379184 53379415 -197308439 + LTR33A LTR ERVL 279 523 0 649 237 0 0 chr2 53379499 53379661 -197308193 - FLAM_C SINE Alu 0 164 3 240 322 96 35 chr2 53380429 53380544 -197307310 - L2 LINE L2 -10 3262 3141 1082 224 58 7 chr2 53380993 53381287 -197306567 - L1MD3 LINE L1 -937 7058 6750 1940 193 38 92 chr2 53381300 53381823 -197306031 + LTR42 LTR ERVL 1 495 0 598 338 39 62 chr2 53382955 53383756 -197304098 + LTR57-int LTR ERVL 1856 2556 -2787 276 323 26 39 chr2 53383787 53383942 -197303912 + LTR57-int LTR ERVL 2779 2931 -3116 2451 155 35 19 chr2 53384120 53384552 -197303302 - Tigger2 DNA MER2_type 0 2718 2280 405 229 12 0 chr2 53384545 53384628 -197303226 - Tigger2 DNA MER2_type -2634 84 1 * 261 326 29 29 chr2 53384701 53384876 -197302978 + LTR57-int LTR ERVL 3276 3450 -2597 1862 235 24 53 chr2 53387656 53388166 -197299688 + LTR42 LTR ERVL 1 495 0 1500 229 40 34 chr2 53388167 53388613 -197299241 - L1MC3 LINE L1 -1078 6707 6259 221 374 65 9 chr2 53389041 53389148 -197298706 + L2 LINE L2 3104 3216 -56 1448 184 24 17 chr2 53391695 53392017 -197295837 + AluJo SINE Alu 1 324 0 828 246 32 0 chr2 53392792 53392979 -197294875 - MER58A DNA MER1_type -31 193 1 1694 180 10 0 chr2 53393500 53393789 -197294065 - AluSx SINE Alu -20 292 1 356 351 26 0 chr2 53393941 53394055 -197293799 + MIR SINE MIR 41 157 -105 181 356 11 11 chr2 53394269 53394359 -197293495 - MIR SINE MIR -117 145 56 328 269 13 0 chr2 53395143 53395221 -197292633 - MLT1L LTR MaLR -536 79 1 358 331 57 6 chr2 53396192 53396349 -197291505 + MIR SINE MIR 83 247 -15 243 79 0 0 chr2 53397065 53397103 -197290751 + (CA)n Simple_repeat Simple_repeat 1 38 0 316 277 58 58 chr2 53397493 53397648 -197290206 + MLT1K LTR MaLR 131 285 -303 257 302 153 26 chr2 53398023 53398212 -197289642 - L2 LINE L2 -191 3081 2869 21 0 0 0 chr2 53398378 53398399 -197289455 + AT_rich Low_complexity Low_complexity 1 21 0 357 314 73 39 chr2 53399632 53399928 -197287926 + L2 LINE L2 2780 3083 -189 188 300 83 17 chr2 53400001 53400061 -197287793 + L2 LINE L2 3245 3308 -5 29 60 0 0 chr2 53400981 53401031 -197286823 + AT_rich Low_complexity Low_complexity 1 50 0 199 285 161 0 chr2 53401324 53401454 -197286400 + MIR SINE MIR 112 262 0 34 0 0 0 chr2 53401881 53401915 -197285939 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 53402456 53402478 -197285376 + AT_rich Low_complexity Low_complexity 1 22 0 542 268 0 0 chr2 53403646 53403773 -197284081 + FLAM_A SINE Alu 7 133 -9 541 296 35 51 chr2 53404322 53404579 -197283275 + L2 LINE L2 2703 2955 -359 430 345 77 41 chr2 53404604 53404850 -197283004 + MIR SINE MIR 8 262 0 563 303 82 23 chr2 53404899 53405203 -197282651 + L2 LINE L2 2991 3312 -1 2892 179 5 11 chr2 53405533 53406092 -197281762 + L1MB1 LINE L1 5612 6167 -1 297 203 114 114 chr2 53407365 53407488 -197280366 + MIR SINE MIR 37 159 -103 27 29 0 0 chr2 53407536 53407570 -197280284 + AT_rich Low_complexity Low_complexity 1 34 0 2337 86 0 32 chr2 53407777 53408091 -197279763 - AluY SINE Alu -7 304 1 429 306 80 104 chr2 53408153 53408539 -197279315 + L2 LINE L2 2895 3271 -1 2054 148 34 3 chr2 53408672 53409029 -197278825 - Tigger2 DNA MER2_type -1 2717 2350 693 179 0 45 chr2 53409032 53409166 -197278688 - Tigger2 DNA MER2_type -2590 128 1 2216 168 57 2 chr2 53409224 53409628 -197278226 + MSTB LTR MaLR 1 426 0 10762 141 15 19 chr2 53409643 53411348 -197276506 + HERVL LTR ERVL 3063 4760 -894 1478 242 128 31 chr2 53411348 53412035 -197275819 + L1ME1 LINE L1 1826 2639 -4082 599 200 32 7 chr2 53412038 53412193 -197275661 + L1ME1 LINE L1 4988 5146 -1394 242 217 17 0 chr2 53412181 53412241 -197275613 - L1M4 LINE L1 -1449 4697 4637 * 2178 214 62 82 chr2 53412217 53412494 -197275360 + L1ME1 LINE L1 5324 5605 -955 1661 31 0 0 chr2 53412494 53412688 -197275166 + L1PA3 LINE L1 5957 6150 -5 2178 214 62 82 chr2 53412688 53413665 -197274189 + L1ME1 LINE L1 5605 6556 -4 348 332 123 41 chr2 53414389 53414729 -197273125 - L2 LINE L2 0 3313 2946 314 248 80 29 chr2 53414876 53415013 -197272841 + MLT1J1 LTR MaLR 289 432 -14 1312 187 11 7 chr2 53415903 53416176 -197271678 - L1MB2 LINE L1 0 6171 5898 224 164 45 15 chr2 53416723 53416790 -197271064 + (TA)n Simple_repeat Simple_repeat 1 69 0 190 349 119 47 chr2 53417731 53418158 -197269696 - L2 LINE L2 -531 2783 2326 23 0 0 0 chr2 53418325 53418348 -197269506 + AT_rich Low_complexity Low_complexity 1 23 0 232 266 58 75 chr2 53418351 53418529 -197269325 - MIR SINE MIR -56 206 32 701 186 68 0 chr2 53418750 53418927 -197268927 + Charlie1 DNA MER1_type 2382 2570 -191 832 39 0 0 chr2 53418930 53419034 -197268820 - L1PA4 LINE L1 0 6155 6052 2301 115 0 0 chr2 53419092 53419397 -197268457 + AluSx SINE Alu 5 309 -3 212 250 0 113 chr2 53419447 53419527 -197268327 - MIR SINE MIR -30 232 162 402 300 10 4 chr2 53419568 53419687 -197268167 + MIR SINE MIR 48 165 -43 727 221 149 17 chr2 53419715 53419896 -197267958 + MER97c DNA MER1_type? 4 208 -882 412 325 53 16 chr2 53419966 53420154 -197267700 + LTR16A LTR ERVL 242 436 -14 216 0 0 0 chr2 53420270 53420294 -197267560 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 222 37 0 0 chr2 53420293 53420320 -197267534 + (CA)n Simple_repeat Simple_repeat 2 28 0 326 267 133 44 chr2 53420886 53421066 -197266788 + L2 LINE L2 3113 3308 -5 336 276 64 76 chr2 53421393 53421643 -197266211 - MIR SINE MIR -2 260 14 2540 250 47 38 chr2 53421904 53422700 -197265154 + L1ME2 LINE L1 5335 6137 -27 2106 152 25 3 chr2 53422702 53423058 -197264796 + THE1B LTR MaLR 1 364 0 9680 115 36 41 chr2 53423071 53424642 -197263212 + THE1B-int LTR MaLR 19 1580 0 2005 157 40 0 chr2 53424642 53424992 -197262862 + THE1B LTR MaLR 1 364 0 3075 159 46 44 chr2 53426006 53426728 -197261126 + L1MA6 LINE L1 5573 6295 -5 351 258 45 0 chr2 53427519 53427608 -197260246 - MIR SINE MIR -120 142 50 21 57 0 0 chr2 53428024 53428059 -197259795 + AT_rich Low_complexity Low_complexity 1 35 0 307 345 0 0 chr2 53428258 53428345 -197259509 - L2 LINE L2 0 3272 3186 701 194 0 0 chr2 53428706 53428830 -197259024 - FLAM_A SINE Alu -9 124 1 23 33 0 0 chr2 53429618 53429648 -197258206 + AT_rich Low_complexity Low_complexity 1 30 0 219 385 0 0 chr2 53430568 53430633 -197257221 - L2 LINE L2 -89 3183 3119 253 0 0 51 chr2 53430965 53431004 -197256850 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 1326 164 3 143 chr2 53431039 53431381 -197256473 + AluJo SINE Alu 1 294 -8 790 290 58 0 chr2 53431418 53431642 -197256212 + MIR SINE MIR 21 257 -5 21 57 0 0 chr2 53432440 53432475 -197255379 + AT_rich Low_complexity Low_complexity 1 35 0 277 252 102 47 chr2 53432723 53432850 -197255004 - MIR SINE MIR -73 189 56 258 218 0 0 chr2 53433630 53433685 -197254169 + L1MA9 LINE L1 6219 6273 -39 213 94 0 0 chr2 53433817 53433849 -197254005 + (TTA)n Simple_repeat Simple_repeat 3 34 0 365 189 11 0 chr2 53435526 53435616 -197252238 + (CA)n Simple_repeat Simple_repeat 2 92 0 1808 156 112 16 chr2 53437328 53437694 -197250160 + MLT2C2 LTR ERVL 3 403 -61 21 0 0 0 chr2 53440167 53440188 -197247666 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 53440265 53440286 -197247568 + AT_rich Low_complexity Low_complexity 1 21 0 251 363 52 13 chr2 53440774 53440922 -197246932 - MIR SINE MIR -76 132 1 386 283 10 0 chr2 53441033 53441132 -197246722 + MER99 DNA DNA 2 101 -727 22 35 0 0 chr2 53441394 53441423 -197246431 + AT_rich Low_complexity Low_complexity 1 29 0 1232 213 36 11 chr2 53441811 53442088 -197245766 + MER99 DNA DNA 192 475 -353 735 229 144 41 chr2 53442088 53442407 -197245447 + L1ME3A LINE L1 5767 6118 -52 23 0 0 0 chr2 53443186 53443209 -197244645 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr2 53444189 53444221 -197243633 + (CA)n Simple_repeat Simple_repeat 2 33 0 22 56 0 0 chr2 53445329 53445365 -197242489 + AT_rich Low_complexity Low_complexity 1 36 0 261 318 11 0 chr2 53446878 53446966 -197240888 + CT-rich Low_complexity Low_complexity 4 92 0 196 357 153 43 chr2 53447565 53447800 -197240054 + L2 LINE L2 2992 3252 -20 25 65 0 0 chr2 53448323 53448369 -197239485 + AT_rich Low_complexity Low_complexity 1 46 0 716 318 101 19 chr2 53450244 53450612 -197237242 - L2 LINE L2 0 3313 2916 2083 25 0 0 chr2 53452180 53452423 -197235431 - L1PA3 LINE L1 -210 5945 5703 1691 15 0 0 chr2 53452423 53452649 -197235205 + L1PA3 LINE L1 5955 6155 0 267 323 32 21 chr2 53453750 53453843 -197234011 + MIR3 SINE MIR 72 165 -43 2025 151 3 0 chr2 53453937 53454248 -197233606 - AluSq SINE Alu -1 312 1 537 262 111 90 chr2 53454660 53454933 -197232921 - L2 LINE L2 -13 3300 3013 2099 121 3 3 chr2 53454933 53455230 -197232624 + AluSx SINE Alu 1 297 -15 537 262 111 90 chr2 53455230 53455380 -197232474 - L2 LINE L2 -300 3013 2868 446 222 157 38 chr2 53455491 53455676 -197232178 + MIR SINE MIR 43 249 -13 223 213 0 43 chr2 53455803 53455850 -197232004 - L2 LINE L2 -27 3286 3242 948 272 52 32 chr2 53455893 53456270 -197231584 + L1ME1 LINE L1 5760 6141 -25 25 0 0 0 chr2 53457934 53457959 -197229895 + AT_rich Low_complexity Low_complexity 1 25 0 510 251 115 54 chr2 53459289 53459584 -197228270 + L2 LINE L2 3000 3312 -1 2238 98 0 7 chr2 53459622 53459928 -197227926 + AluY SINE Alu 1 304 -7 24 32 0 0 chr2 53462616 53462647 -197225207 + AT_rich Low_complexity Low_complexity 1 31 0 207 369 87 0 chr2 53462925 53463028 -197224826 + MIR3 SINE MIR 53 164 -44 23 33 0 0 chr2 53464107 53464137 -197223717 + AT_rich Low_complexity Low_complexity 1 30 0 277 291 138 65 chr2 53464317 53464578 -197223276 + L3 LINE CR1 437 716 -861 277 391 77 26 chr2 53464655 53464995 -197222859 + L2 LINE L2 2370 2726 -588 336 241 0 13 chr2 53465136 53465215 -197222639 + MLT1D LTR MaLR 1 78 -427 1568 182 97 55 chr2 53465226 53465866 -197221988 + MER39 LTR ERV1 1 705 -2 1401 224 25 28 chr2 53465944 53466301 -197221553 + MLT1D LTR MaLR 150 505 0 183 402 43 22 chr2 53466428 53466520 -197221334 + L2 LINE L2 3143 3236 -36 601 327 56 63 chr2 53466578 53466711 -197221143 + L3 LINE CR1 835 968 -609 291 93 0 0 chr2 53466711 53466754 -197221100 + (CA)n Simple_repeat Simple_repeat 2 44 0 601 327 56 63 chr2 53466754 53467015 -197220839 + L3 LINE CR1 968 1226 -351 986 251 104 22 chr2 53467036 53467391 -197220463 + MSTD LTR MaLR 1 384 -12 367 348 52 35 chr2 53467563 53467793 -197220061 + L3 LINE CR1 1339 1572 -5 406 391 30 13 chr2 53468670 53468905 -197218949 - MIR SINE MIR -16 246 8 207 114 0 0 chr2 53471139 53471174 -197216680 + (A)n Simple_repeat Simple_repeat 1 35 0 569 294 77 45 chr2 53473218 53473528 -197214326 - L2 LINE L2 -6 3307 2988 266 345 86 0 chr2 53474224 53474340 -197213514 - MIR SINE MIR -104 158 33 21 0 0 0 chr2 53474652 53474673 -197213181 + AT_rich Low_complexity Low_complexity 1 21 0 193 277 0 0 chr2 53474673 53474720 -197213134 + MIR3 SINE MIR 156 202 -6 1815 203 14 6 chr2 53475856 53476215 -197211639 + MLT1A1 LTR MaLR 4 365 0 325 272 37 37 chr2 53476719 53476855 -197210999 - L2 LINE L2 -61 3252 3117 22 0 0 0 chr2 53478772 53478794 -197209060 + AT_rich Low_complexity Low_complexity 1 22 0 212 151 0 38 chr2 53478854 53478907 -197208947 + (CATA)n Simple_repeat Simple_repeat 2 52 0 21 36 0 0 chr2 53479409 53479437 -197208417 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 53480093 53480117 -197207737 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 53481846 53481869 -197205985 + AT_rich Low_complexity Low_complexity 1 23 0 232 300 10 0 chr2 53485124 53485224 -197202630 + (TA)n Simple_repeat Simple_repeat 1 101 0 27 49 0 0 chr2 53489883 53489924 -197197930 + AT_rich Low_complexity Low_complexity 1 41 0 1331 143 0 10 chr2 53490235 53490444 -197197410 - AluSg/x SINE Alu -17 295 89 1380 142 0 0 chr2 53490474 53490671 -197197183 + AluSx SINE Alu 1 197 -115 1019 182 10 0 chr2 53490680 53490878 -197196976 - L1 LINE L1 -3818 2328 2129 1511 123 38 0 chr2 53490878 53491101 -197196753 + L1PB1 LINE L1 5903 6146 -5 216 0 0 0 chr2 53491404 53491428 -197196426 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr2 53492374 53492396 -197195458 + AT_rich Low_complexity Low_complexity 1 22 0 560 237 69 0 chr2 53492860 53492991 -197194863 - MER3 DNA MER1_type -64 145 6 1701 146 38 14 chr2 53493818 53494105 -197193749 + AluSx SINE Alu 1 294 -18 310 51 0 0 chr2 53494559 53494598 -197193256 - tRNA-Ile-ATT tRNA tRNA -38 39 1 202 302 94 38 chr2 53495626 53495732 -197192122 + L2 LINE L2 3200 3311 -2 285 75 0 0 chr2 53496011 53496051 -197191803 + (ATG)n Simple_repeat Simple_repeat 1 40 0 2978 188 45 2 chr2 53496180 53496755 -197191099 - MER7C DNA MER2_type -1 601 2 1319 117 10 0 chr2 53496755 53496951 -197190903 - THE1C-int LTR MaLR -1380 200 3 664 130 61 0 chr2 53496953 53497068 -197190786 - THE1C LTR MaLR 0 375 254 2421 91 0 0 chr2 53497298 53497606 -197190248 + AluY SINE Alu 1 308 -3 28 102 0 0 chr2 53497741 53497839 -197190015 + AT_rich Low_complexity Low_complexity 1 98 0 2243 115 3 0 chr2 53498567 53498872 -197188982 + AluSc SINE Alu 4 309 0 1348 181 86 42 chr2 53499294 53499653 -197188201 + THE1C LTR MaLR 1 375 0 9222 146 9 36 chr2 53499655 53501278 -197186576 + THE1C-int LTR MaLR 3 1580 0 1279 195 54 43 chr2 53501278 53501648 -197186206 + THE1C LTR MaLR 1 374 -1 566 100 0 0 chr2 53501662 53501742 -197186112 + MADE1 DNA Mariner 1 80 0 206 261 0 0 chr2 53501750 53501796 -197186058 - MIR SINE MIR -114 148 103 288 178 0 0 chr2 53501862 53501907 -197185947 + MER3 DNA MER1_type 1 45 -164 380 304 60 8 chr2 53502678 53502872 -197184982 + MIR SINE MIR 41 244 -18 741 211 8 0 chr2 53503422 53503555 -197184299 - MER58A DNA MER1_type -1 223 90 1589 173 40 0 chr2 53503561 53503838 -197184016 + AluJb SINE Alu 1 288 -24 373 272 25 0 chr2 53503905 53503986 -197183868 - MER58A DNA MER1_type -24 83 1 207 0 0 0 chr2 53504246 53504269 -197183585 + (TA)n Simple_repeat Simple_repeat 2 24 0 207 0 0 0 chr2 53504268 53504291 -197183563 + (CA)n Simple_repeat Simple_repeat 2 24 0 234 0 0 0 chr2 53504306 53504332 -197183522 + (TTA)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr2 53505037 53505058 -197182796 + AT_rich Low_complexity Low_complexity 1 21 0 319 234 0 16 chr2 53505614 53505678 -197182176 + L2 LINE L2 3210 3272 0 37 23 0 0 chr2 53505730 53505774 -197182080 + AT_rich Low_complexity Low_complexity 1 44 0 33 0 0 0 chr2 53506402 53506435 -197181419 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr2 53507807 53507839 -197180015 + AT_rich Low_complexity Low_complexity 1 32 0 564 240 62 0 chr2 53508889 53509018 -197178836 - MER20 DNA MER1_type 0 219 83 275 224 0 0 chr2 53509207 53509265 -197178589 - MIR SINE MIR -109 153 96 213 65 0 0 chr2 53509572 53509603 -197178251 + (AGATG)n Simple_repeat Simple_repeat 4 34 0 1902 237 75 18 chr2 53509647 53510250 -197177604 + MER20B DNA MER1_type 60 696 -87 201 39 0 0 chr2 53510307 53510333 -197177521 + (TA)n Simple_repeat Simple_repeat 2 27 0 2647 14 0 0 chr2 53510333 53510623 -197177231 - AluYa5 SINE Alu -10 301 12 21 0 0 0 chr2 53510624 53510645 -197177209 + AT_rich Low_complexity Low_complexity 1 21 0 427 309 0 36 chr2 53510857 53510996 -197176858 - L2 LINE L2 -9 3304 3171 259 307 40 0 chr2 53511563 53511638 -197176216 + MIR SINE MIR 52 129 -133 2039 120 7 20 chr2 53511925 53512225 -197175629 - AluSx SINE Alu -12 300 5 242 303 58 10 chr2 53513968 53514067 -197173787 - MIR SINE MIR -67 141 41 1454 177 105 3 chr2 53514462 53514756 -197173098 + MER44D DNA MER2_type 9 602 -7 1416 169 130 0 chr2 53514835 53515089 -197172765 + AluSx SINE Alu 2 288 -14 43 0 0 0 chr2 53515089 53515132 -197172722 + AT_rich Low_complexity Low_complexity 1 43 0 317 301 131 11 chr2 53515141 53515324 -197172530 - MIR SINE MIR -10 252 48 550 236 50 2 chr2 53515587 53515726 -197172128 + MIR SINE MIR 40 182 -80 766 209 32 13 chr2 53515763 53515921 -197171933 + MER20 DNA MER1_type 58 218 -1 1127 258 57 26 chr2 53516838 53517257 -197170597 - L1 LINE L1 -1752 4394 3963 440 265 96 31 chr2 53517259 53517452 -197170402 - L1 LINE L1 -2289 3857 3649 3055 203 50 11 chr2 53517456 53518116 -197169738 + L1MB7 LINE L1 5479 6164 -20 274 278 56 48 chr2 53518177 53518303 -197169551 - MIR3 SINE MIR -7 201 75 315 122 0 0 chr2 53518676 53518725 -197169129 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 463 265 213 0 chr2 53519600 53519736 -197168118 - MER5A DNA MER1_type -18 171 7 288 0 0 0 chr2 53520886 53520918 -197166936 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 181 219 16 16 chr2 53521682 53521746 -197166108 + CT-rich Low_complexity Low_complexity 3 66 0 220 203 29 29 chr2 53523516 53523585 -197164269 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 24 0 0 0 chr2 53523826 53523850 -197164004 + AT_rich Low_complexity Low_complexity 1 24 0 227 321 92 54 chr2 53526020 53526204 -197161650 + MIR3 SINE MIR 14 204 -4 678 302 170 35 chr2 53526690 53527236 -197160618 + L2 LINE L2 1322 1941 -1373 335 320 207 29 chr2 53527239 53527722 -197160132 + L2 LINE L2 2711 3297 -16 193 194 0 0 chr2 53527759 53527795 -197160059 + MIR SINE MIR 227 262 0 3733 124 61 7 chr2 53528122 53528741 -197159113 - MER39B LTR ERV1 0 653 1 2240 102 0 10 chr2 53529671 53529984 -197157870 + AluSg SINE Alu 1 310 0 22 0 0 0 chr2 53529984 53530006 -197157848 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 53530438 53530474 -197157380 + AT_rich Low_complexity Low_complexity 1 36 0 2777 123 32 0 chr2 53530798 53531206 -197156648 - MER1A DNA MER1_type 0 529 109 289 407 14 14 chr2 53531210 53531350 -197156504 - MER91A DNA MER1_type -56 140 1 203 291 79 31 chr2 53532252 53532379 -197155475 - L2 LINE L2 -4 3309 3177 284 220 17 119 chr2 53533238 53533356 -197154498 + MER112 DNA MER1_type 118 223 -37 1002 231 48 9 chr2 53533359 53533588 -197154266 + Charlie1 DNA MER1_type 2 239 -2522 686 166 7 14 chr2 53533573 53533712 -197154142 + Charlie1 DNA MER1_type 2623 2760 -1 * 352 286 109 68 chr2 53536487 53536635 -197151219 - L1ME4a LINE L1 -17 6104 5963 374 39 19 0 chr2 53536635 53536687 -197151167 + (TA)n Simple_repeat Simple_repeat 1 53 0 352 286 109 68 chr2 53536687 53536933 -197150921 - L1ME4a LINE L1 -158 5963 5694 192 284 15 30 chr2 53536956 53537023 -197150831 + L2 LINE L2 3205 3270 -2 21 0 0 0 chr2 53538328 53538349 -197149505 + AT_rich Low_complexity Low_complexity 1 21 0 542 165 11 0 chr2 53538538 53538629 -197149225 - AluSc SINE Alu -76 233 142 274 0 0 0 chr2 53538640 53538672 -197149182 - MADE1 DNA Mariner -37 43 12 2088 134 0 3 chr2 53539548 53539855 -197147999 + AluSx SINE Alu 6 311 -1 21 0 0 0 chr2 53539926 53539947 -197147907 + AT_rich Low_complexity Low_complexity 1 21 0 389 20 20 0 chr2 53540188 53540238 -197147616 + (TG)n Simple_repeat Simple_repeat 2 52 0 183 100 0 0 chr2 53540315 53540345 -197147509 + (GA)n Simple_repeat Simple_repeat 2 31 0 26 0 0 0 chr2 53541078 53541104 -197146750 + AT_rich Low_complexity Low_complexity 1 26 0 195 129 0 0 chr2 53541314 53541345 -197146509 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1898 119 0 83 chr2 53542316 53542643 -197145211 - AluSx SINE Alu -2 310 11 521 213 125 25 chr2 53542665 53542825 -197145029 + MER58C DNA MER1_type 38 213 -2 455 360 61 24 chr2 53543692 53544020 -197143834 + HAL1 LINE L1 1427 1766 -741 341 308 114 38 chr2 53544497 53544864 -197142990 + L1ME LINE L1 5415 5809 -312 22 70 0 0 chr2 53544934 53544977 -197142877 + AT_rich Low_complexity Low_complexity 1 43 0 22 70 0 0 chr2 53545626 53545669 -197142185 + AT_rich Low_complexity Low_complexity 1 43 0 394 349 17 34 chr2 53547099 53547274 -197140580 + MIR SINE MIR 21 192 -70 2711 225 77 43 chr2 53547692 53548635 -197139219 - L1ME1 LINE L1 -5 6161 5192 395 287 50 10 chr2 53549380 53549481 -197138373 - L2 LINE L2 0 3272 3168 492 295 87 6 chr2 53550586 53550769 -197137085 - MIR SINE MIR -56 206 9 182 278 0 56 chr2 53551893 53551947 -197135907 - L3 LINE CR1 -1025 552 502 438 298 176 0 chr2 53552395 53552600 -197135254 - MIR SINE MIR -14 248 8 438 304 14 0 chr2 53553534 53553682 -197134172 - MIR3 SINE MIR -10 198 49 1753 154 10 26 chr2 53553686 53553991 -197133863 + AluSx SINE Alu 3 302 -10 198 340 90 21 chr2 53554881 53555025 -197132829 + MIR3 SINE MIR 3 156 -52 332 143 18 0 chr2 53555449 53555505 -197132349 + AluJb SINE Alu 3 59 -243 289 162 0 4 chr2 53555581 53555754 -197132100 + AluJb SINE Alu 62 302 0 1357 184 31 34 chr2 53555875 53556169 -197131685 - AluJo SINE Alu -11 301 9 254 385 98 0 chr2 53557631 53557753 -197130101 - L2 LINE L2 0 3272 3139 982 86 0 21 chr2 53557881 53558021 -197129833 + MER11B LTR ERVK 1086 1222 -14 763 333 126 30 chr2 53558041 53558864 -197128990 + L2 LINE L2 2412 3313 0 26 0 0 0 chr2 53559132 53559158 -197128696 + AT_rich Low_complexity Low_complexity 1 26 0 1111 263 52 52 chr2 53560111 53560638 -197127216 + MER39 LTR ERV1 1 707 0 330 313 130 0 chr2 53561144 53561275 -197126579 + MIR3 SINE MIR 49 196 -12 202 182 0 45 chr2 53562094 53562138 -197125716 + GA-rich Low_complexity Low_complexity 3 44 0 708 130 0 0 chr2 53562905 53563040 -197124814 + AluSg/x SINE Alu 177 311 0 698 203 7 0 chr2 53563657 53563805 -197124049 - L1MA5A LINE L1 -4 6293 6145 1960 216 2 5 chr2 53563805 53564410 -197123444 + L1M2 LINE L1 2488 3090 -3758 2943 31 0 8 chr2 53564573 53564930 -197122924 + L1PA4 LINE L1 5802 6155 0 379 359 59 22 chr2 53565148 53565418 -197122436 + L2 LINE L2 2949 3228 -44 22 35 0 0 chr2 53565925 53565954 -197121900 + AT_rich Low_complexity Low_complexity 1 29 0 34 24 0 0 chr2 53567092 53567133 -197120721 + AT_rich Low_complexity Low_complexity 1 41 0 405 290 57 94 chr2 53568778 53569159 -197118695 - L1MC4a LINE L1 -338 5783 5478 1319 195 76 11 chr2 53569165 53569442 -197118412 - AluJo SINE Alu -17 295 1 245 303 28 9 chr2 53569495 53569604 -197118250 - L1P5 LINE L1 -723 5431 5321 193 254 68 0 chr2 53569644 53569703 -197118151 - MIR SINE MIR -7 255 193 191 349 18 72 chr2 53570162 53570328 -197117526 - L2 LINE L2 -610 2704 2548 296 336 40 20 chr2 53572737 53572886 -197114968 + L3b LINE CR1 1277 1428 -155 22 0 0 0 chr2 53572979 53573001 -197114853 + AT_rich Low_complexity Low_complexity 1 22 0 621 291 41 23 chr2 53573014 53573234 -197114620 + MIR SINE MIR 17 240 -22 190 338 29 15 chr2 53573407 53573475 -197114379 + MIR SINE MIR 25 93 -115 2330 204 184 0 chr2 53574231 53574884 -197112970 + L1 LINE L1 4631 5403 -743 6741 76 6 0 chr2 53574509 53575631 -197112223 + L1PA7 LINE L1 5024 6151 -3 1158 188 13 77 chr2 53575699 53575997 -197111857 - AluJo SINE Alu -9 303 25 23 33 0 0 chr2 53576161 53576191 -197111663 + AT_rich Low_complexity Low_complexity 1 30 0 359 364 51 15 chr2 53577564 53577759 -197110095 + MIR SINE MIR 45 246 -16 696 239 157 4 chr2 53578432 53578662 -197109192 - L1ME3 LINE L1 0 6162 5898 26 0 0 0 chr2 53579525 53579551 -197108303 + AT_rich Low_complexity Low_complexity 1 26 0 608 279 172 9 chr2 53580571 53580786 -197107068 - MIR SINE MIR -11 251 2 379 304 29 68 chr2 53581532 53581739 -197106115 + L2 LINE L2 2635 2833 -481 250 303 151 25 chr2 53582011 53582130 -197105724 + L2 LINE L2 3180 3313 0 270 136 0 0 chr2 53582131 53582175 -197105679 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 213 173 39 19 chr2 53588609 53588661 -197099193 + (CA)n Simple_repeat Simple_repeat 1 53 0 333 0 0 0 chr2 53588904 53588941 -197098913 + (CA)n Simple_repeat Simple_repeat 2 38 0 347 89 18 0 chr2 53590508 53590564 -197097290 + (GGA)n Simple_repeat Simple_repeat 1 57 0 423 56 0 0 chr2 53590868 53590922 -197096932 + (GA)n Simple_repeat Simple_repeat 1 54 0 703 261 49 20 chr2 53592022 53592225 -197095629 + MIR SINE MIR 13 221 -41 228 265 0 0 chr2 53593271 53593320 -197094534 + MIR SINE MIR 98 146 -62 648 321 63 4 chr2 53593369 53593606 -197094248 - MIR SINE MIR -10 252 2 623 290 31 88 chr2 53596417 53596769 -197091085 - MER102b DNA MER1_type 0 341 10 1485 188 72 77 chr2 53597085 53597554 -197090300 + MLT1C LTR MaLR 1 467 0 396 0 0 0 chr2 53597687 53597731 -197090123 + (CA)n Simple_repeat Simple_repeat 1 44 0 2018 202 4 129 chr2 53598060 53598595 -197089259 + MER70A LTR ERVL 1 468 -4 2115 262 81 19 chr2 53598679 53599745 -197088109 - L1ME3A LINE L1 -10 6440 5302 22 56 0 0 chr2 53599887 53599923 -197087931 + AT_rich Low_complexity Low_complexity 1 36 0 630 289 141 18 chr2 53600013 53600452 -197087402 - L1ME3A LINE L1 -2144 4282 3790 307 280 32 24 chr2 53600458 53600583 -197087271 - L1ME3A LINE L1 -2820 3606 3481 2809 16 0 0 chr2 53600597 53600908 -197086946 - AluY SINE Alu 0 311 1 540 283 44 15 chr2 53601096 53601481 -197086373 - L1MEc LINE L1 -3709 2717 2363 388 336 174 3 chr2 53601490 53601811 -197086043 - L1MEc LINE L1 -4322 2285 1910 244 284 62 25 chr2 53601856 53602018 -197085836 - L1MEc LINE L1 -4767 1659 1492 322 301 32 61 chr2 53602138 53602600 -197085254 - L1MEc LINE L1 -4885 1531 1083 308 360 18 0 chr2 53603680 53603794 -197084060 + L2 LINE L2 3154 3269 -3 202 244 0 0 chr2 53605078 53605123 -197082731 - MER5B DNA MER1_type -7 171 127 8227 181 23 26 chr2 53605167 53605532 -197082322 - L1MA6 LINE L1 -1 6299 5934 1724 170 18 4 chr2 53605532 53605808 -197082046 - AluSx SINE Alu -32 280 1 8227 181 23 26 chr2 53605808 53606565 -197081289 - L1MA6 LINE L1 -366 5934 5176 1362 114 53 40 chr2 53606565 53606661 -197081193 - MER30 DNA MER1_type 0 230 137 2578 37 3 0 chr2 53606661 53606960 -197080894 + AluY SINE Alu 1 300 -11 1362 114 53 40 chr2 53606960 53607090 -197080764 - MER30 DNA MER1_type -93 137 1 8227 181 23 26 chr2 53607090 53608632 -197079222 - L1MA6 LINE L1 -1124 5176 3632 1908 174 3 0 chr2 53608887 53609197 -197078657 + AluJb SINE Alu 1 311 -1 637 228 72 91 chr2 53609785 53610061 -197077793 + MER96B DNA MER1_type? 1 271 -146 1237 228 67 35 chr2 53610091 53610376 -197077478 - AluJb SINE Alu -8 294 1 304 250 16 0 chr2 53610376 53610440 -197077414 + MER96B DNA MER1_type? 353 417 0 367 293 73 47 chr2 53611299 53611449 -197076405 + MER5A DNA MER1_type 36 189 0 202 230 11 46 chr2 53611962 53612049 -197075805 + (TCTA)n Simple_repeat Simple_repeat 2 85 0 574 188 9 0 chr2 53612177 53612289 -197075565 - L1MA4 LINE L1 -73 6227 6115 1065 237 60 54 chr2 53613161 53613609 -197074245 - L1MC5 LINE L1 -530 7431 6981 322 253 124 27 chr2 53613926 53614112 -197073742 - L1MC5 LINE L1 -785 7176 6973 398 311 27 7 chr2 53614117 53614265 -197073589 + MLT1H LTR MaLR 12 162 -387 267 239 15 0 chr2 53614485 53614552 -197073302 + MLT1H LTR MaLR 458 525 -24 765 261 11 17 chr2 53614600 53614909 -197072945 - L1MC5 LINE L1 -821 6987 6680 29 47 0 0 chr2 53615016 53615059 -197072795 + AT_rich Low_complexity Low_complexity 1 43 0 854 264 102 49 chr2 53615288 53615895 -197071959 - L1MC4a LINE L1 -1633 6175 5537 1617 245 42 28 chr2 53616250 53616901 -197070953 + L1ME LINE L1 4999 5667 -497 2488 77 0 3 chr2 53616901 53617213 -197070641 + AluY SINE Alu 1 311 0 1617 245 42 28 chr2 53617213 53617293 -197070561 + L1ME LINE L1 5667 5744 -420 2260 141 29 21 chr2 53617889 53618262 -197069592 - L1PB4 LINE L1 0 6156 5778 426 39 0 0 chr2 53618262 53618314 -197069540 + (TA)n Simple_repeat Simple_repeat 1 52 0 2260 141 29 21 chr2 53618314 53618360 -197069494 - L1PB4 LINE L1 -378 5778 5734 341 239 101 9 chr2 53620542 53620651 -197067203 + MIR SINE MIR 118 236 -26 252 0 0 0 chr2 53620769 53620797 -197067057 + (A)n Simple_repeat Simple_repeat 1 28 0 315 0 0 0 chr2 53620840 53620875 -197066979 + (CA)n Simple_repeat Simple_repeat 2 36 0 215 273 66 74 chr2 53620940 53621061 -197066793 + MIR3 SINE MIR 36 155 -53 636 221 177 6 chr2 53621485 53621643 -197066211 + MER5A DNA MER1_type 5 189 0 297 326 57 28 chr2 53622126 53622267 -197065587 + L2 LINE L2 3128 3272 0 390 319 157 0 chr2 53623573 53623783 -197064071 + MIR SINE MIR 6 248 -14 220 247 0 74 chr2 53623793 53623874 -197063980 - MIR SINE MIR -104 158 84 2159 126 0 0 chr2 53624235 53624536 -197063318 - AluSq SINE Alu -12 301 1 296 352 24 16 chr2 53624945 53625070 -197062784 + MIR3 SINE MIR 37 162 -46 820 174 20 7 chr2 53625078 53625227 -197062627 + FRAM SINE Alu 1 150 -26 215 268 54 62 chr2 53625651 53625763 -197062091 + L2 LINE L2 3162 3272 0 255 31 0 0 chr2 53626589 53626621 -197061233 + (CA)n Simple_repeat Simple_repeat 1 32 0 256 242 30 0 chr2 53626625 53626691 -197061163 + (TATATG)n Simple_repeat Simple_repeat 3 70 0 236 372 43 0 chr2 53630273 53630367 -197057487 - L3b LINE CR1 -219 1364 1267 237 200 9 122 chr2 53630596 53630711 -197057143 + MIR SINE MIR 154 255 -7 270 347 65 32 chr2 53630983 53631107 -197056747 + MIR SINE MIR 20 147 -115 21 0 0 0 chr2 53631122 53631143 -197056711 + AT_rich Low_complexity Low_complexity 1 21 0 263 287 178 8 chr2 53631418 53631547 -197056307 + MER5A DNA MER1_type 33 183 -6 243 321 83 0 chr2 53633498 53633582 -197054272 + L3 LINE CR1 429 519 -1058 385 255 69 7 chr2 53633648 53633793 -197054061 - MER113 DNA MER1_type? -317 204 51 259 304 0 0 chr2 53633794 53633850 -197054004 + L3 LINE CR1 1515 1570 -7 359 295 20 27 chr2 53635865 53636014 -197051840 + MER117 DNA MER1_type 2 149 -48 1562 152 9 71 chr2 53636206 53636529 -197051325 - AluJo SINE Alu -7 305 3 1892 196 39 49 chr2 53636756 53637267 -197050587 - MER67D LTR ERV1 -4 510 5 3356 115 73 112 chr2 53638177 53638993 -197048861 - LTR1 LTR ERV1 0 785 1 23 0 0 0 chr2 53639210 53639233 -197048621 + AT_rich Low_complexity Low_complexity 1 23 0 1181 226 49 62 chr2 53639257 53639709 -197048145 + MER39 LTR ERV1 260 705 -2 347 310 82 41 chr2 53640781 53641026 -197046828 - L2 LINE L2 -23 3290 3036 338 269 128 0 chr2 53641001 53641150 -197046704 + MIR SINE MIR 82 249 -13 * 1534 184 11 18 chr2 53641324 53641596 -197046258 + AluJb SINE Alu 25 294 -18 1311 246 81 14 chr2 53642414 53642833 -197045021 - MER110A LTR ERV1 -21 447 1 285 29 0 0 chr2 53642870 53642904 -197044950 + (AAATG)n Simple_repeat Simple_repeat 1 34 0 624 291 33 41 chr2 53646549 53646820 -197041034 + L2 LINE L2 3045 3313 0 252 311 29 58 chr2 53647411 53647514 -197040340 + MIR SINE MIR 26 125 -83 1333 216 72 55 chr2 53647551 53648010 -197039844 - MLT1C LTR MaLR 0 467 1 339 314 49 27 chr2 53648917 53649102 -197038752 - MIR SINE MIR -72 190 2 237 333 48 0 chr2 53649289 53649373 -197038481 - L2 LINE L2 0 3272 3185 2949 147 43 22 chr2 53649699 53650252 -197037602 + L1MA7 LINE L1 5722 6286 -5 349 273 102 0 chr2 53650531 53650659 -197037195 - MIR SINE MIR -99 163 23 23 54 0 0 chr2 53651015 53651052 -197036802 + AT_rich Low_complexity Low_complexity 1 37 0 209 298 21 21 chr2 53651586 53651680 -197036174 + MER5A DNA MER1_type 1 94 -95 310 342 51 0 chr2 53651752 53651869 -197035985 - MIR3 SINE MIR -46 162 40 2925 249 47 26 chr2 53652649 53653571 -197034283 - L1ME1 LINE L1 -18 6148 5209 1767 147 0 27 chr2 53653771 53654086 -197033768 - AluSx SINE Alu 0 307 1 308 209 55 169 chr2 53654802 53655312 -197032542 - L1ME2 LINE L1 -2 6162 5759 1333 104 0 0 chr2 53655312 53655504 -197032350 + L1MA1 LINE L1 6110 6301 -1 308 209 55 169 chr2 53655504 53655693 -197032161 - L1ME2 LINE L1 -405 5759 5550 279 0 0 0 chr2 53656425 53656456 -197031398 + (T)n Simple_repeat Simple_repeat 1 31 0 964 100 15 0 chr2 53657028 53657158 -197030696 + AluSp SINE Alu 1 132 -181 6707 65 12 25 chr2 53657170 53658859 -197028995 + SVA Other Other 1 1394 0 22 35 0 0 chr2 53658946 53658975 -197028879 + AT_rich Low_complexity Low_complexity 1 29 0 1064 323 105 40 chr2 53659308 53660024 -197027830 + L2 LINE L2 1893 2654 -660 381 312 31 102 chr2 53660065 53660446 -197027408 + L2 LINE L2 2863 3216 -97 3743 196 98 13 chr2 53660468 53661243 -197026611 - MER21B LTR ERV1 -14 849 9 225 0 0 0 chr2 53662129 53662154 -197025700 + (CA)n Simple_repeat Simple_repeat 1 25 0 218 283 57 0 chr2 53662700 53662753 -197025101 - MIR SINE MIR -3 259 204 21 0 0 0 chr2 53664265 53664286 -197023568 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 53664515 53664542 -197023312 + AT_rich Low_complexity Low_complexity 1 27 0 799 294 29 20 chr2 53664862 53665059 -197022795 - MIR SINE MIR -1 261 60 1515 88 65 0 chr2 53665059 53665275 -197022579 + MER30 DNA MER1_type 1 230 0 799 294 29 20 chr2 53665275 53665322 -197022532 - MIR SINE MIR -202 60 15 230 351 0 0 chr2 53665336 53665413 -197022441 + MIR3 SINE MIR 111 187 -21 4437 181 29 24 chr2 53666764 53667984 -197019870 - L1MB1 LINE L1 -13 6155 4930 907 231 48 19 chr2 53667991 53668260 -197019594 + L1 LINE L1 4360 4636 -1510 4099 187 38 32 chr2 53668269 53669249 -197018605 - L1MB1 LINE L1 -1826 4320 3335 22 35 0 0 chr2 53672122 53672151 -197015703 + AT_rich Low_complexity Low_complexity 1 29 0 656 221 0 0 chr2 53672162 53672298 -197015556 + FLAM_C SINE Alu 4 139 -4 306 154 39 13 chr2 53672920 53672998 -197014856 + MER116 DNA Mariner 1 80 0 922 215 21 34 chr2 53673252 53673489 -197014365 - AluJo SINE Alu -19 293 60 255 103 0 0 chr2 53673693 53673732 -197014122 + (CA)n Simple_repeat Simple_repeat 1 39 0 23 33 0 0 chr2 53673776 53673806 -197014048 + AT_rich Low_complexity Low_complexity 1 30 0 2020 118 7 3 chr2 53675465 53675753 -197012101 - AluSc SINE Alu -18 291 3 23 0 0 0 chr2 53679801 53679824 -197008030 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 53680705 53680735 -197007119 + AT_rich Low_complexity Low_complexity 1 30 0 1661 137 65 8 chr2 53680818 53681080 -197006774 - AluSx SINE Alu -32 280 4 423 253 313 0 chr2 53681316 53681514 -197006340 - MIR SINE MIR -1 261 2 243 341 147 28 chr2 53681946 53682157 -197005697 + MIR SINE MIR 27 262 0 1268 209 40 75 chr2 53683387 53683788 -197004066 - MLT1C LTR MaLR 0 467 81 890 153 6 0 chr2 53683792 53683955 -197003899 + CT-rich Low_complexity Low_complexity 1 164 0 2025 125 0 0 chr2 53683967 53684246 -197003608 - AluSq SINE Alu -34 279 1 490 166 11 13 chr2 53684246 53684340 -197003514 - MLT1C LTR MaLR -296 94 1 2183 123 0 0 chr2 53685606 53685899 -197001955 + AluSq SINE Alu 1 293 -20 24 53 0 0 chr2 53686472 53686510 -197001344 + AT_rich Low_complexity Low_complexity 1 38 0 180 77 0 0 chr2 53686540 53686566 -197001288 + (TG)n Simple_repeat Simple_repeat 2 27 0 1850 116 113 12 chr2 53686636 53686969 -197000885 - MER47A DNA MER2_type 0 366 1 569 100 0 0 chr2 53687406 53687486 -197000368 + MADE1 DNA Mariner 1 80 0 22 35 0 0 chr2 53687624 53687653 -197000201 + AT_rich Low_complexity Low_complexity 1 29 0 182 194 0 0 chr2 53688660 53688691 -196999163 - L2 LINE L2 -16 3256 3226 341 351 91 5 chr2 53688692 53688900 -196998954 - MIR SINE MIR -8 254 29 785 239 14 28 chr2 53688920 53689138 -196998716 - MER20 DNA MER1_type -4 215 1 1566 188 34 69 chr2 53689288 53689666 -196998188 + MLT1A1 LTR MaLR 1 365 0 185 196 22 0 chr2 53690894 53690940 -196996914 + GA-rich Low_complexity Low_complexity 1 47 0 260 263 50 61 chr2 53691152 53691251 -196996603 + MER5A DNA MER1_type 17 114 -75 997 211 9 28 chr2 53692329 53692547 -196995307 - MER20 DNA MER1_type 0 219 6 436 330 40 12 chr2 53693496 53693669 -196994185 + MIR SINE MIR 17 194 -68 314 296 61 0 chr2 53694049 53694164 -196993690 - L2 LINE L2 -46 3267 3146 234 240 40 0 chr2 53694291 53694341 -196993513 - MIR SINE MIR -91 117 66 21 0 0 0 chr2 53695309 53695330 -196992524 + AT_rich Low_complexity Low_complexity 1 21 0 1401 201 35 9 chr2 53695471 53695807 -196992047 + Tigger4(Zombi) DNA MER2_type 1 2731 0 649 148 28 0 chr2 53695889 53695997 -196991857 - AluSq SINE Alu -85 228 118 255 31 0 0 chr2 53696288 53696320 -196991534 + (TG)n Simple_repeat Simple_repeat 1 32 0 309 68 0 0 chr2 53697819 53697863 -196989991 + (TC)n Simple_repeat Simple_repeat 1 44 0 2242 69 24 7 chr2 53698069 53698357 -196989497 + AluY SINE Alu 1 293 -18 1975 128 16 7 chr2 53698831 53699178 -196988676 - AluSq SINE Alu 0 313 1 193 293 13 40 chr2 53699307 53699382 -196988472 - L3b LINE CR1 -127 1456 1384 1365 195 46 71 chr2 53700839 53700908 -196986946 - MLT1B LTR MaLR 0 390 321 2418 86 0 0 chr2 53700908 53701212 -196986642 + AluY SINE Alu 1 304 -7 1365 195 46 71 chr2 53701212 53701537 -196986317 - MLT1B LTR MaLR -69 321 6 200 357 100 41 chr2 53701626 53701917 -196985937 + L2 LINE L2 2553 2860 -454 191 242 129 48 chr2 53702246 53702308 -196985546 + L2 LINE L2 3201 3267 -5 204 265 0 0 chr2 53702322 53702371 -196985483 + (CA)n Simple_repeat Simple_repeat 1 49 0 202 416 10 0 chr2 53703308 53703409 -196984445 + MIR SINE MIR 50 151 -111 1872 104 4 12 chr2 53703955 53704235 -196983619 - AluSx SINE Alu 0 312 35 418 278 217 14 chr2 53704474 53704686 -196983168 - MIR SINE MIR 0 262 8 1612 243 62 38 chr2 53705008 53705510 -196982344 + LTR40a LTR ERVL 6 519 0 259 260 67 80 chr2 53705880 53706209 -196981645 + L1ME4a LINE L1 5200 5532 -589 6268 77 33 11 chr2 53706209 53706629 -196981225 + L1PA7 LINE L1 5254 5663 -491 2310 71 0 0 chr2 53706629 53706969 -196980885 - AluY SINE Alu 0 340 1 6268 77 33 11 chr2 53706969 53707429 -196980425 + L1PA7 LINE L1 5663 6154 0 259 260 67 80 chr2 53707429 53707528 -196980326 + L1ME4a LINE L1 5532 6045 -76 23 0 0 0 chr2 53707530 53707553 -196980301 + AT_rich Low_complexity Low_complexity 1 23 0 261 83 0 0 chr2 53709770 53709806 -196978048 + (TG)n Simple_repeat Simple_repeat 2 37 0 243 174 35 35 chr2 53709806 53709892 -196977962 + (TA)n Simple_repeat Simple_repeat 2 87 0 352 270 184 31 chr2 53714498 53714661 -196973193 + L2 LINE L2 3126 3313 0 21 0 0 0 chr2 53715106 53715127 -196972727 + AT_rich Low_complexity Low_complexity 1 21 0 211 283 50 75 chr2 53715408 53715528 -196972326 - L2 LINE L2 -5 3308 3192 245 226 16 0 chr2 53716112 53716174 -196971680 + (TA)n Simple_repeat Simple_repeat 2 64 0 285 29 0 0 chr2 53717506 53717540 -196970314 + (TG)n Simple_repeat Simple_repeat 2 35 0 217 374 24 0 chr2 53717780 53717863 -196969991 - MIR3 SINE MIR -8 200 116 1235 192 36 28 chr2 53717869 53718119 -196969735 + AluJb SINE Alu 21 272 -40 31 26 0 0 chr2 53718612 53718650 -196969204 + AT_rich Low_complexity Low_complexity 1 38 0 269 336 36 9 chr2 53718839 53718949 -196968905 + L2 LINE L2 3149 3261 -11 21 36 0 0 chr2 53719479 53719507 -196968347 + AT_rich Low_complexity Low_complexity 1 28 0 532 257 118 40 chr2 53721774 53721988 -196965866 + MIR SINE MIR 43 261 -1 339 241 134 9 chr2 53722169 53722281 -196965573 + L2 LINE L2 3171 3296 -17 207 0 0 0 chr2 53722927 53722950 -196964904 + (TAA)n Simple_repeat Simple_repeat 3 25 0 312 299 83 35 chr2 53722976 53723120 -196964734 - MIR SINE MIR -13 249 99 3105 154 2 4 chr2 53723599 53724124 -196963730 + L1PA16 LINE L1 5640 6163 -3 637 207 0 18 chr2 53724150 53724261 -196963593 + FAM SINE Alu 1 109 -76 2231 154 35 45 chr2 53724261 53724302 -196963552 - MLT2A2 LTR ERVL 0 554 514 279 0 0 0 chr2 53724302 53724333 -196963521 + (TG)n Simple_repeat Simple_repeat 2 32 0 2231 154 35 45 chr2 53724333 53724847 -196963007 - MLT2A2 LTR ERVL -40 514 1 2475 111 8 3 chr2 53724855 53725214 -196962640 - THE1B LTR MaLR -3 361 1 316 111 130 0 chr2 53725214 53725268 -196962586 + FAM SINE Alu 105 165 -14 396 0 0 0 chr2 53726585 53726629 -196961225 + (CA)n Simple_repeat Simple_repeat 1 44 0 633 196 0 0 chr2 53727849 53727956 -196959898 + FLAM_A SINE Alu 1 107 -35 243 0 0 0 chr2 53727961 53727988 -196959866 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 558 154 0 9 chr2 53728913 53729023 -196958831 - L1MA4 LINE L1 -6 6294 6186 414 288 73 5 chr2 53729769 53729974 -196957880 - L1ME LINE L1 -320 5801 5583 318 299 28 19 chr2 53731126 53731233 -196956621 - MIR SINE MIR -107 155 48 21 0 0 0 chr2 53732319 53732340 -196955514 + AT_rich Low_complexity Low_complexity 1 21 0 212 298 202 0 chr2 53734481 53734585 -196953269 - L2 LINE L2 -8 3305 3181 856 98 0 0 chr2 53735851 53735974 -196951880 - L1PA5 LINE L1 0 6154 6032 242 164 18 0 chr2 53735976 53736031 -196951823 + T-rich Low_complexity Low_complexity 4 59 0 523 323 12 12 chr2 53736568 53736735 -196951119 + MIR3 SINE MIR 35 201 -7 344 383 51 9 chr2 53738235 53738452 -196949402 + MIR SINE MIR 15 240 -22 449 310 70 5 chr2 53738528 53738715 -196949139 + MIR SINE MIR 35 233 -29 1657 182 4 4 chr2 53739858 53740176 -196947678 - AluJo SINE Alu 0 322 5 2547 111 8 16 chr2 53740530 53740908 -196946946 + THE1C LTR MaLR 1 375 0 399 89 0 0 chr2 53741033 53741089 -196946765 + (GGGGA)n Simple_repeat Simple_repeat 2 57 0 629 288 76 0 chr2 53741169 53741367 -196946487 - MIR SINE MIR 0 262 50 427 81 85 17 chr2 53741492 53741729 -196946125 + (TA)n Simple_repeat Simple_repeat 1 253 0 197 31 94 0 chr2 53741830 53741862 -196945992 + T-rich Low_complexity Low_complexity 4 38 0 6895 51 16 0 chr2 53741869 53743120 -196944734 - L1PA4 LINE L1 -11 6144 4884 206 186 0 23 chr2 53746510 53746553 -196941301 + (TTA)n Simple_repeat Simple_repeat 1 42 0 13364 47 3 1 chr2 53747347 53749781 -196938073 - L1PA4 LINE L1 -2 6153 3704 1971 148 0 0 chr2 53749950 53750241 -196937613 - AluSx SINE Alu -21 291 1 191 288 138 25 chr2 53750593 53750673 -196937181 + MIR3 SINE MIR 111 199 -9 287 250 10 39 chr2 53751309 53751413 -196936441 + (TA)n Simple_repeat Simple_repeat 2 102 0 956 172 22 0 chr2 53751829 53752009 -196935845 - L1PB4 LINE L1 -334 5822 5639 1294 203 20 36 chr2 53752009 53752113 -196935741 + L1PB4 LINE L1 5843 5947 -209 1470 177 191 11 chr2 53752113 53752474 -196935380 - MSTA LTR MaLR -2 426 1 1294 203 20 36 chr2 53752474 53752674 -196935180 + L1PB4 LINE L1 5947 6142 -14 508 228 60 98 chr2 53753578 53753826 -196934028 - L1ME1 LINE L1 -6 6160 5925 2323 87 0 3 chr2 53753826 53754137 -196933717 - AluY SINE Alu -1 310 1 508 228 60 98 chr2 53754137 53754204 -196933650 - L1ME1 LINE L1 -241 5925 5857 * 2182 163 107 19 chr2 53754203 53754856 -196932998 - L1M2 LINE L1 -490 5801 5089 * 2968 192 37 37 chr2 53754852 53755559 -196932295 + L1 LINE L1 3687 4393 -1753 1018 167 14 9 chr2 53755556 53755771 -196932083 - L1M2 LINE L1 -1569 4577 4362 * 1521 239 90 2 chr2 53755788 53756264 -196931590 + L1 LINE L1 2570 3087 -3059 1528 269 28 38 chr2 53756412 53757099 -196930755 + L1M4 LINE L1 2485 3164 -2982 1139 258 71 13 chr2 53757121 53757571 -196930283 - L1MEc LINE L1 -4258 2138 1663 46 45 0 0 chr2 53757571 53757638 -196930216 + AT_rich Low_complexity Low_complexity 1 67 0 5363 155 42 50 chr2 53757670 53759902 -196927952 - L1MA6 LINE L1 -4 6296 4083 1997 306 84 24 chr2 53759944 53761308 -196926546 - L1MEc LINE L1 -4921 1475 31 1933 212 54 2 chr2 53761691 53762096 -196925758 + MSTB1 LTR MaLR 1 426 -6 2046 114 3 0 chr2 53763246 53763536 -196924318 - AluSp SINE Alu -2 311 21 308 265 177 20 chr2 53764117 53764264 -196923590 + MLT1J2 LTR MaLR 276 445 -5 598 350 87 14 chr2 53764359 53764933 -196922921 - L1M4 LINE L1 -1135 5011 4396 423 297 127 65 chr2 53765059 53765564 -196922290 - HAL1 LINE L1 -898 1609 1074 442 276 154 36 chr2 53766200 53766421 -196921433 + MIR SINE MIR 3 249 -13 391 319 107 6 chr2 53766549 53766718 -196921136 - MIR SINE MIR -70 192 7 2095 196 41 10 chr2 53767307 53767720 -196920134 - MSTB LTR MaLR 0 426 1 336 24 0 0 chr2 53768198 53768239 -196919615 + (CA)n Simple_repeat Simple_repeat 2 42 0 27 0 0 0 chr2 53768807 53768834 -196919020 + AT_rich Low_complexity Low_complexity 1 27 0 709 185 109 138 chr2 53769166 53769506 -196918348 - MER2 DNA MER2_type -14 331 2 835 337 113 64 chr2 53770546 53770868 -196916986 - L1MC5 LINE L1 -35 7926 7621 2094 137 0 6 chr2 53770868 53771181 -196916673 - AluSx SINE Alu -1 311 1 835 337 113 64 chr2 53771181 53771496 -196916358 - L1MC5 LINE L1 -340 7621 7258 26 50 0 0 chr2 53771592 53771632 -196916222 + AT_rich Low_complexity Low_complexity 1 40 0 2086 134 0 0 chr2 53771772 53772070 -196915784 + AluSx SINE Alu 1 298 -14 414 258 139 36 chr2 53772084 53772278 -196915576 - MIR SINE MIR -48 214 1 182 283 141 92 chr2 53772554 53772837 -196915017 - L3 LINE CR1 -110 1467 1171 3638 139 48 86 chr2 53772866 53773046 -196914808 + LTR1 LTR ERV1 1 186 -599 2121 62 18 0 chr2 53773046 53773345 -196914509 + AluY SINE Alu 1 304 0 3638 139 48 86 chr2 53773345 53773977 -196913877 + LTR1 LTR ERV1 186 783 -2 185 360 81 0 chr2 53774341 53774427 -196913427 - L3 LINE CR1 -493 1084 992 2100 80 45 0 chr2 53775798 53776084 -196911770 - AluY SINE Alu -10 301 3 189 176 0 44 chr2 53777252 53777320 -196910534 + A-rich Low_complexity Low_complexity 4 68 0 214 365 24 0 chr2 53777375 53777460 -196910394 + MIR3 SINE MIR 83 169 -39 21 0 0 0 chr2 53777622 53777643 -196910211 + AT_rich Low_complexity Low_complexity 1 21 0 428 53 82 29 chr2 53778100 53778270 -196909584 + (TA)n Simple_repeat Simple_repeat 2 180 0 325 113 86 7 chr2 53778283 53778434 -196909420 + (TA)n Simple_repeat Simple_repeat 2 164 0 25 0 0 0 chr2 53778537 53778562 -196909292 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr2 53778659 53778696 -196909158 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 53779936 53779957 -196907897 + AT_rich Low_complexity Low_complexity 1 21 0 1567 266 21 54 chr2 53780480 53781039 -196906815 - MER90 LTR ERV1 0 614 74 347 247 145 96 chr2 53781837 53782003 -196905851 + MIR SINE MIR 10 183 -79 1054 162 6 11 chr2 53782018 53782197 -196905657 + AluSx SINE Alu 4 181 -131 26 30 0 0 chr2 53782198 53782231 -196905623 + AT_rich Low_complexity Low_complexity 1 33 0 1772 162 7 3 chr2 53783114 53783411 -196904443 - AluSx SINE Alu -14 298 1 27 62 0 0 chr2 53783763 53783811 -196904043 + AT_rich Low_complexity Low_complexity 1 48 0 312 283 61 0 chr2 53784572 53784671 -196903183 - L1MEc LINE L1 -3681 2534 2430 976 249 111 86 chr2 53784737 53785287 -196902567 - MLT1E1 LTR MaLR -16 638 75 347 308 14 57 chr2 53785429 53785640 -196902214 - L1MEc LINE L1 -4580 1816 1615 314 289 44 58 chr2 53785646 53785871 -196901983 - LTR16B LTR ERVL -10 454 233 6315 62 6 13 chr2 53785872 53786731 -196901123 - L1PA5 LINE L1 -755 5391 4539 6070 54 1 0 chr2 53786731 53787490 -196900364 + L1PA5 LINE L1 5392 6153 -1 633 313 17 21 chr2 53787493 53787726 -196900128 - LTR16B LTR ERVL -225 239 8 1775 170 3 0 chr2 53788596 53788890 -196898964 - AluJb SINE Alu -17 295 1 235 279 163 23 chr2 53788912 53789041 -196898813 + MIR SINE MIR 20 166 -96 8435 207 60 29 chr2 53790145 53791777 -196896077 + L1MC3 LINE L1 5459 7167 -618 400 107 40 13 chr2 53791777 53791852 -196896002 - L1PA8 LINE L1 -1 6171 6095 8435 207 60 29 chr2 53791852 53792257 -196895597 + L1MC3 LINE L1 7167 7558 -227 641 333 97 42 chr2 53792320 53792612 -196895242 + HERV16 LTR ERVL 1681 2006 -2990 1495 203 3 23 chr2 53792612 53792918 -196894936 - AluJb SINE Alu -8 304 5 641 333 97 42 chr2 53792918 53793057 -196894797 + HERV16 LTR ERVL 2006 2136 -2860 25 31 0 0 chr2 53793093 53793125 -196894729 + AT_rich Low_complexity Low_complexity 1 32 0 2257 277 84 34 chr2 53793229 53793549 -196894305 + L1ME1 LINE L1 1311 1614 -4601 2008 134 3 3 chr2 53793549 53793854 -196894000 + AluSg SINE Alu 1 305 -5 2257 277 84 34 chr2 53793854 53795793 -196892061 + L1ME1 LINE L1 1614 3628 -2587 1030 199 0 0 chr2 53795796 53795977 -196891877 + L1P LINE L1 4059 4239 -1907 * 5948 91 11 9 chr2 53795971 53796832 -196891022 + L1PA14 LINE L1 5298 6159 -2 2986 251 54 28 chr2 53797009 53799114 -196888740 + L1ME1 LINE L1 3667 5861 -392 684 270 53 5 chr2 53799121 53799390 -196888464 + L1ME1 LINE L1 5951 6240 -7 1474 226 43 55 chr2 53799579 53800018 -196887836 + MLT1D LTR MaLR 72 505 0 403 319 55 15 chr2 53800018 53800311 -196887543 + LTR16A LTR ERVL 51 431 -19 1617 182 29 23 chr2 53800794 53801380 -196886474 + MER73 LTR ERVL 2 644 0 2031 137 10 3 chr2 53801858 53802164 -196885690 + AluSg SINE Alu 1 308 -2 359 270 11 0 chr2 53802222 53802311 -196885543 + MLT1E3 LTR MaLR 203 292 -334 732 244 78 10 chr2 53802336 53802541 -196885313 + MLT1E3 LTR MaLR 398 616 -8 390 328 76 18 chr2 53802689 53802860 -196884994 + MIR SINE MIR 9 189 -73 699 112 0 0 chr2 53803474 53803581 -196884273 + (CA)n Simple_repeat Simple_repeat 2 108 0 748 247 112 20 chr2 53803581 53803885 -196883969 - MLT2C1 LTR ERVL -65 332 1 2097 112 3 3 chr2 53804439 53804742 -196883112 - AluSc SINE Alu -6 303 1 194 261 170 42 chr2 53804864 53805029 -196882825 - MER5C DNA MER1_type -3 321 136 284 298 50 25 chr2 53805717 53805838 -196882016 - MER5C DNA MER1_type -200 124 1 1096 265 56 48 chr2 53806592 53807004 -196880850 + MLT1C LTR MaLR 53 467 0 583 240 66 16 chr2 53807038 53807221 -196880633 + MLT1H LTR MaLR 39 230 -319 23 33 0 0 chr2 53807560 53807590 -196880264 + AT_rich Low_complexity Low_complexity 1 30 0 340 336 71 20 chr2 53808118 53808371 -196879483 + LTR16C LTR ERVL 225 490 -1 225 279 49 0 chr2 53808999 53809060 -196878794 - L2 LINE L2 0 3272 3209 295 362 74 13 chr2 53809205 53809434 -196878420 - MIR SINE MIR 0 262 20 346 330 0 17 chr2 53809844 53809959 -196877895 + LTR16A LTR ERVL 117 229 -221 1120 288 70 19 chr2 53810134 53810564 -196877290 - LTR40c LTR ERVL -13 452 1 223 103 52 17 chr2 53810928 53810986 -196876868 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 * 343 238 11 38 chr2 53810981 53811166 -196876688 + (TA)n Simple_repeat Simple_repeat 1 180 0 2177 267 88 40 chr2 53812546 53812847 -196875007 - L1M4b LINE L1 -6111 748 463 2236 82 9 38 chr2 53812847 53813166 -196874688 + AluY SINE Alu 1 310 -1 2177 267 88 40 chr2 53813166 53813565 -196874289 - L1M4b LINE L1 -6396 463 14 182 301 55 0 chr2 53814035 53814108 -196873746 + MIR3 SINE MIR 127 203 -5 677 222 47 29 chr2 53815383 53815554 -196872300 + MIR SINE MIR 85 258 -4 428 301 258 0 chr2 53817180 53817389 -196870465 + L3 LINE CR1 1246 1508 -69 2173 129 0 0 chr2 53817769 53818071 -196869783 - AluSg SINE Alu -8 302 1 184 268 0 0 chr2 53818912 53818953 -196868901 + MIR SINE MIR 111 151 -57 465 19 0 0 chr2 53819130 53819184 -196868670 + (TA)n Simple_repeat Simple_repeat 1 54 0 24 32 0 0 chr2 53819914 53819945 -196867909 + AT_rich Low_complexity Low_complexity 1 31 0 1312 244 41 3 chr2 53820091 53820481 -196867373 - L1 LINE L1 -2748 3398 2994 * 6268 127 72 5 chr2 53820471 53821670 -196866184 - L1PBa LINE L1 -4497 2366 938 3446 156 39 3 chr2 53821677 53822538 -196865316 + L1PB1 LINE L1 4899 5791 -360 245 133 0 0 chr2 53822556 53822601 -196865253 - LTR66 LTR ERVL -172 438 394 245 133 0 0 chr2 53822565 53822610 -196865244 + LTR66 LTR ERVL 394 438 -172 423 219 0 0 chr2 53822623 53822719 -196865135 + (CA)n Simple_repeat Simple_repeat 2 97 0 2111 112 19 49 chr2 53822719 53823086 -196864768 + L1PB1 LINE L1 5795 6150 -1 2231 155 22 0 chr2 53823486 53823853 -196864001 + THE1C LTR MaLR 1 375 0 25 31 0 0 chr2 53824892 53824924 -196862930 + AT_rich Low_complexity Low_complexity 1 32 0 4347 107 34 6 chr2 53824994 53825669 -196862185 + L1PA13 LINE L1 5465 6158 -5 190 116 47 0 chr2 53825757 53825800 -196862054 + (TA)n Simple_repeat Simple_repeat 2 46 0 300 140 193 0 chr2 53825834 53825891 -196861963 - LTR49 LTR ERV1 0 595 528 15431 118 18 7 chr2 53825897 53828223 -196859631 + L1PA5 LINE L1 11 2361 -3785 12895 59 25 4 chr2 53828220 53831121 -196856733 + L1PA5 LINE L1 3208 6154 0 * 3591 138 47 0 chr2 53831131 53831709 -196856145 - MER39B LTR ERV1 -48 605 1 504 146 0 0 chr2 53832194 53832283 -196855571 + (TA)n Simple_repeat Simple_repeat 1 89 0 285 291 12 0 chr2 53832288 53832374 -196855480 - L1ME LINE L1 -611 5551 5465 617 297 39 30 chr2 53832479 53832711 -196855143 - MLT1J2 LTR MaLR -216 234 1 437 271 6 0 chr2 53832770 53832947 -196854907 + (TA)n Simple_repeat Simple_repeat 2 179 0 240 204 28 111 chr2 53832982 53833090 -196854764 - L1MC4 LINE L1 -1340 6702 6604 221 233 0 0 chr2 53833216 53833276 -196854578 + A-rich Low_complexity Low_complexity 6 65 0 336 265 0 0 chr2 53833292 53833360 -196854494 - MER58 DNA MER1_type -2334 86 19 228 350 73 23 chr2 53833937 53834114 -196853740 + L2 LINE L2 2187 2372 -942 250 270 34 20 chr2 53834426 53834574 -196853280 + (TA)n Simple_repeat Simple_repeat 2 151 0 333 331 58 44 chr2 53834610 53834921 -196852933 + L2 LINE L2 2734 3053 -219 182 253 120 0 chr2 53836863 53836938 -196850916 - MIR SINE MIR -54 208 125 376 350 29 0 chr2 53836946 53837086 -196850768 + MIR SINE MIR 48 191 -71 2322 249 52 85 chr2 53837497 53838339 -196849515 + MER21B LTR ERV1 1 816 -47 2032 131 16 3 chr2 53838339 53838644 -196849210 + AluSx SINE Alu 1 309 -3 2322 249 52 85 chr2 53838644 53838659 -196849195 + MER21B LTR ERV1 816 830 -33 1163 210 12 135 chr2 53839353 53839767 -196848087 - MLT1A1 LTR MaLR -2 363 1 669 330 93 23 chr2 53840599 53841072 -196846782 - L2 LINE L2 -337 2977 2472 421 311 37 75 chr2 53841092 53841414 -196846440 - L2 LINE L2 -1410 1904 1595 2125 192 22 26 chr2 53841453 53841912 -196845942 - MSTB2 LTR MaLR 0 457 1 22 0 0 0 chr2 53842086 53842108 -196845746 + AT_rich Low_complexity Low_complexity 1 22 0 1147 320 142 56 chr2 53843637 53844490 -196843364 - L2 LINE L2 0 3313 2339 2336 138 8 11 chr2 53844490 53844866 -196842988 - THE1C LTR MaLR 0 375 1 1147 320 142 56 chr2 53844866 53845130 -196842724 - L2 LINE L2 -974 2339 2099 2007 95 35 3 chr2 53845131 53845416 -196842438 + AluSg SINE Alu 1 294 -16 4511 186 59 23 chr2 53845435 53846436 -196841418 - L1MA9 LINE L1 0 6312 5260 2023 146 0 0 chr2 53846436 53846730 -196841124 - AluSx SINE Alu -18 294 1 4511 186 59 23 chr2 53846730 53847049 -196840805 - L1MA9 LINE L1 -1052 5260 4954 928 279 13 13 chr2 53847050 53847283 -196840571 - L1M3c LINE L1 -5908 233 1 292 247 78 0 chr2 53847353 53847430 -196840424 - L2 LINE L2 -1312 2002 1920 965 258 110 15 chr2 53847941 53848489 -196839365 + L1ME1 LINE L1 1117 1713 -4899 324 261 39 39 chr2 53848561 53848691 -196839163 + L1ME1 LINE L1 2808 2937 -4185 412 248 29 7 chr2 53848702 53848839 -196839015 + L1ME1 LINE L1 2941 3080 -3861 * 437 209 99 22 chr2 53848832 53849014 -196838840 + L1MD3 LINE L1 6867 7062 -933 312 130 0 0 chr2 53849147 53849193 -196838661 + MLT1F1 LTR MaLR 75 120 -447 1721 203 134 28 chr2 53849198 53849729 -196838125 + L1MD3 LINE L1 7404 7990 -5 1489 258 71 4 chr2 53849739 53850243 -196837611 + L1ME1 LINE L1 3071 3608 -3333 1210 262 70 20 chr2 53850245 53850829 -196837025 + L1ME1 LINE L1 3644 4256 -2685 210 284 25 0 chr2 53850839 53850920 -196836934 + (TA)n Simple_repeat Simple_repeat 2 84 0 538 251 66 6 chr2 53850929 53851096 -196836758 + L1ME1 LINE L1 4272 4448 -2493 * 1384 262 46 65 chr2 53851090 53851719 -196836135 + L1ME1 LINE L1 6325 6941 -20 2866 174 35 10 chr2 53852724 53852767 -196835087 + Tigger7 DNA MER2_type 2 42 -691 1669 127 8 4 chr2 53852767 53853034 -196834820 - L1PB1 LINE L1 -8 6143 5876 2866 174 35 10 chr2 53853034 53853497 -196834357 + Tigger7 DNA MER2_type 42 521 -212 501 196 11 0 chr2 53853495 53853587 -196834267 + Tigger7 DNA MER2_type 2399 2491 0 * 408 325 20 20 chr2 53853693 53853848 -196834006 - L2 LINE L2 -1 3312 3155 1705 164 30 7 chr2 53853848 53854147 -196833707 + AluSx SINE Alu 3 308 -4 408 325 20 20 chr2 53854147 53854188 -196833666 - L2 LINE L2 -157 3156 3116 6554 74 3 3 chr2 53905561 53906456 -196781398 + L1PA3 LINE L1 5261 6155 0 1780 145 3 40 chr2 53906490 53906793 -196781061 + AluSx SINE Alu 1 292 -20 548 146 0 11 chr2 53917519 53917608 -196770246 - MLT1A2 LTR MaLR -285 89 2 185 328 0 0 chr2 53921101 53921159 -196766695 - L2 LINE L2 -298 2974 2917 2176 130 3 0 chr2 53921775 53922076 -196765778 - AluSx SINE Alu -10 302 1 972 210 9 21 chr2 53922678 53922911 -196764943 + L1PB4 LINE L1 5927 6156 0 1779 270 18 50 chr2 53923011 53923577 -196764277 + MER77 LTR ERV1 57 604 -1 5268 148 38 5 chr2 53924008 53924684 -196763170 - L1MA5A LINE L1 -3 6294 5577 210 37 0 0 chr2 53924684 53924711 -196763143 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 5268 148 38 5 chr2 53924711 53924983 -196762871 - L1MA5A LINE L1 -720 5577 5315 6066 82 4 46 chr2 53924984 53925905 -196761949 - L1PA10 LINE L1 -1 6167 5285 3144 168 59 3 chr2 53925905 53926519 -196761335 + L1P LINE L1 4511 5158 -988 4590 193 12 14 chr2 53926530 53927571 -196760283 - L1MA5A LINE L1 -816 5330 4292 2192 110 7 3 chr2 53927592 53927900 -196759954 - AluSc SINE Alu 0 309 1 322 204 23 0 chr2 53928990 53929078 -196758776 + L1MC4 LINE L1 6614 6703 -1339 348 111 0 0 chr2 53929209 53929263 -196758591 + (TA)n Simple_repeat Simple_repeat 1 54 0 210 297 0 0 chr2 53929520 53929584 -196758270 + (TG)n Simple_repeat Simple_repeat 1 64 0 242 186 23 0 chr2 53930475 53930518 -196757336 - MER2 DNA MER2_type 0 345 302 1101 192 15 0 chr2 53930598 53930796 -196757058 - MER2 DNA MER2_type -138 207 7 457 206 0 10 chr2 53931496 53931598 -196756256 - L1PA15 LINE L1 0 6165 6065 307 284 11 0 chr2 53932551 53932646 -196755208 + MER5A DNA MER1_type 9 104 -85 204 218 35 11 chr2 53934344 53934431 -196753423 + GA-rich Low_complexity Low_complexity 1 89 0 237 316 40 46 chr2 53934635 53934787 -196753067 - L2 LINE L2 -1339 1975 1825 346 340 19 0 chr2 53935210 53935316 -196752538 + MER20B DNA MER1_type 104 211 -572 933 314 88 15 chr2 53936264 53936913 -196750941 - L2 LINE L2 -17 3296 2595 2252 145 6 0 chr2 53936913 53937271 -196750583 - MER46B DNA MER2_type -1 235 1 409 342 8 0 chr2 53937426 53937543 -196750311 - L2 LINE L2 -9 3304 3187 897 283 120 31 chr2 53938793 53939400 -196748454 - L1MC4 LINE L1 -442 7600 6940 1018 284 93 40 chr2 53939423 53940081 -196747773 - L1ME3A LINE L1 -26 6144 5452 594 278 55 33 chr2 53940127 53940490 -196747364 - L1ME3A LINE L1 -1544 4602 4232 384 22 0 0 chr2 53940590 53940635 -196747219 + (TA)n Simple_repeat Simple_repeat 1 45 0 571 284 81 0 chr2 53940667 53940903 -196746951 - L1ME3A LINE L1 -1962 4184 3930 2170 103 3 0 chr2 53940939 53941254 -196746600 - AluY SINE Alu 0 311 1 284 139 76 25 chr2 53941373 53941452 -196746402 - L1ME3A LINE L1 -2431 3715 3633 332 325 64 54 chr2 53941452 53941732 -196746122 - L1ME LINE L1 -5129 941 659 1888 231 9 7 chr2 53943601 53944034 -196743820 - L1MC3 LINE L1 -1225 6560 6127 2474 52 0 10 chr2 53944224 53944532 -196743322 - AluY SINE Alu -6 305 1 24 67 0 0 chr2 53944545 53944590 -196743264 + AT_rich Low_complexity Low_complexity 1 45 0 25 51 0 0 chr2 53946086 53946125 -196741729 + AT_rich Low_complexity Low_complexity 1 39 0 360 0 0 0 chr2 53946384 53946424 -196741430 + (CA)n Simple_repeat Simple_repeat 2 41 0 6196 138 17 0 chr2 53947567 53948501 -196739353 - L1P LINE L1 -5186 960 11 386 205 53 3 chr2 53948807 53948916 -196738938 + L1ME LINE L1 5459 5575 -591 270 0 0 0 chr2 53949479 53949509 -196738345 + (TG)n Simple_repeat Simple_repeat 1 30 0 348 64 0 0 chr2 53949509 53949556 -196738298 + (GA)n Simple_repeat Simple_repeat 2 48 0 2384 159 31 80 chr2 53949674 53950270 -196737584 - MER4E LTR ERV1 0 766 1 411 296 153 14 chr2 53950635 53950858 -196736996 - MIR SINE MIR -1 261 8 28 0 0 0 chr2 53950909 53950937 -196736917 + AT_rich Low_complexity Low_complexity 1 28 0 317 280 130 0 chr2 53951325 53951425 -196736429 - L2 LINE L2 0 3313 3201 225 383 43 28 chr2 53951600 53951741 -196736113 - MIR3 SINE MIR -64 144 2 25 0 0 0 chr2 53951759 53951784 -196736070 + AT_rich Low_complexity Low_complexity 1 25 0 711 214 0 0 chr2 53952450 53952581 -196735273 - FLAM_A SINE Alu -5 137 7 4149 125 303 105 chr2 53952742 53954162 -196733692 - pTR5 LTR ERV1 0 2438 738 24 0 0 0 chr2 53955890 53955914 -196731940 + AT_rich Low_complexity Low_complexity 1 24 0 319 159 0 63 chr2 53956069 53956132 -196731722 - L1PA8A LINE L1 -6 6125 6067 416 298 62 6 chr2 53958012 53958190 -196729664 - MIR SINE MIR 0 262 75 214 332 148 43 chr2 53958480 53958736 -196729118 - L3 LINE CR1 -820 757 475 25 0 0 0 chr2 53958873 53958898 -196728956 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 53959067 53959095 -196728759 + AT_rich Low_complexity Low_complexity 1 28 0 226 328 0 0 chr2 53959492 53959556 -196728298 - tRNA-Ile-ATT tRNA tRNA -10 67 4 361 331 29 6 chr2 53960727 53960902 -196726952 - MIR SINE MIR -10 252 74 230 185 19 0 chr2 53961310 53961364 -196726490 - L1MA9 LINE L1 -5 6307 6253 1360 229 41 33 chr2 53961403 53961791 -196726063 + MSTD LTR MaLR 17 396 0 3636 281 29 55 chr2 53961793 53963022 -196724832 + MSTD-int LTR MaLR 2 1199 -536 1383 241 46 32 chr2 53963022 53963391 -196724463 + MSTD LTR MaLR 23 396 0 224 220 20 0 chr2 53963600 53963650 -196724204 + CT-rich Low_complexity Low_complexity 2 52 0 1105 228 35 40 chr2 53964070 53964382 -196723472 + L1M4 LINE L1 2554 2865 -3281 1950 125 3 33 chr2 53964382 53964686 -196723168 - AluSg SINE Alu -15 295 1 1105 228 35 40 chr2 53964686 53964777 -196723077 + L1M4 LINE L1 2865 2955 -3191 1770 216 35 9 chr2 53964878 53965305 -196722549 + L1PA15-16 LINE L1 2324 2761 -4088 2015 141 24 0 chr2 53965333 53965630 -196722224 - AluSx SINE Alu -8 304 1 2984 115 14 5 chr2 53965630 53966065 -196721789 - MLT2A1 LTR ERVL -5 439 1 2719 75 6 0 chr2 53966065 53966425 -196721429 - HERVL-A1 LTR ERVL 0 5654 5293 14808 86 21 1 chr2 53966426 53968390 -196719464 - HERVL LTR ERVL -3160 2494 491 6631 216 19 56 chr2 53968392 53970026 -196717828 - THE1C-int LTR MaLR -76 1575 3 1695 166 46 40 chr2 53970028 53970401 -196717453 - THE1C LTR MaLR 0 375 1 423 0 0 0 chr2 53970417 53970464 -196717390 + (CA)n Simple_repeat Simple_repeat 2 48 0 1875 184 50 24 chr2 53970464 53970621 -196717233 + L1P LINE L1 4839 4991 -1171 1756 193 3 3 chr2 53970621 53970921 -196716933 + AluJb SINE Alu 3 302 -10 1875 184 50 24 chr2 53970921 53971297 -196716557 + L1P LINE L1 4991 5379 -783 246 361 27 22 chr2 53971387 53971570 -196716284 + L2 LINE L2 2675 2858 -456 2290 89 7 0 chr2 53971754 53972045 -196715809 - AluSg SINE Alu -17 293 1 1919 109 76 0 chr2 53972475 53972750 -196715104 - AluSq SINE Alu -17 296 1 21 0 0 0 chr2 53974183 53974204 -196713650 + AT_rich Low_complexity Low_complexity 1 21 0 2264 90 0 7 chr2 53974204 53974494 -196713360 + AluSg SINE Alu 1 288 -22 243 347 157 30 chr2 53974504 53974766 -196713088 + L2 LINE L2 2533 2827 -487 227 283 67 100 chr2 53974762 53974882 -196712972 + L2 LINE L2 3154 3269 -3 * 256 320 40 7 chr2 53975433 53975696 -196712158 - L1MEc LINE L1 -4561 2020 1705 1627 150 141 28 chr2 53976135 53976462 -196711392 - THE1B LTR MaLR 0 364 1 25 0 0 0 chr2 53976678 53976703 -196711151 + AT_rich Low_complexity Low_complexity 1 25 0 1450 214 3 14 chr2 53977106 53977401 -196710453 + MLT2D LTR ERVL 1 292 -122 258 211 0 0 chr2 53977418 53977470 -196710384 - MLT2C2 LTR ERVL -52 412 361 246 62 0 0 chr2 53977471 53977503 -196710351 + (TG)n Simple_repeat Simple_repeat 2 33 0 664 135 0 0 chr2 53977519 53977615 -196710239 + MLT1C LTR MaLR 370 465 -2 23 33 0 0 chr2 53978157 53978187 -196709667 + AT_rich Low_complexity Low_complexity 1 30 0 2122 114 7 3 chr2 53978360 53978659 -196709195 - AluSp SINE Alu -13 300 1 21 0 0 0 chr2 53979422 53979443 -196708411 + AT_rich Low_complexity Low_complexity 1 21 0 222 284 82 75 chr2 53979506 53979640 -196708214 + MIR SINE MIR 64 198 -64 25 51 0 0 chr2 53980900 53980939 -196706915 + AT_rich Low_complexity Low_complexity 1 39 0 297 51 0 0 chr2 53981733 53981772 -196706082 + (TG)n Simple_repeat Simple_repeat 2 40 0 1800 161 0 0 chr2 53982079 53982358 -196705496 - AluSc SINE Alu -30 279 1 7417 28 2 1 chr2 53983773 53985130 -196702724 + L1PA4 LINE L1 4514 5872 -283 1609 195 114 56 chr2 53985516 53985997 -196701857 - MER67D LTR ERV1 0 514 6 1724 111 8 8 chr2 53985997 53986250 -196701604 + AluSc SINE Alu 54 306 -3 211 329 44 7 chr2 53986445 53986582 -196701272 + MIR SINE MIR 119 260 -2 214 280 20 0 chr2 53988416 53988466 -196699388 - MIR SINE MIR -139 69 19 574 283 153 25 chr2 53990585 53990939 -196696915 + L1MEd LINE L1 812 1210 -4909 230 0 0 32 chr2 53990973 53991004 -196696850 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2159 277 73 57 chr2 53992155 53993423 -196694431 + L1MEc LINE L1 35 1322 -5074 816 289 122 26 chr2 53993485 53994209 -196693645 + L1MEc LINE L1 1401 2193 -4203 * 1299 147 58 0 chr2 53994208 53994383 -196693471 - L1P4 LINE L1 -496 5670 5478 207 0 0 0 chr2 53994383 53994406 -196693448 + (TTG)n Simple_repeat Simple_repeat 1 23 0 1299 147 58 0 chr2 53994406 53994455 -196693399 - L1P4 LINE L1 -688 5478 5433 305 243 87 6 chr2 53994481 53994654 -196693200 + L1MEc LINE L1 2179 2365 -4031 6640 60 23 0 chr2 53994835 53995741 -196692113 - L1PA7 LINE L1 -7 6147 5224 1982 72 18 0 chr2 53995746 53996022 -196691832 + L1PA7 LINE L1 4918 5198 -948 221 389 16 8 chr2 53996037 53996163 -196691691 + MIR SINE MIR 53 179 -83 1004 264 38 63 chr2 53996543 53996941 -196690913 + MLT1B LTR MaLR 1 388 -2 3044 204 9 3 chr2 53998102 53998744 -196689110 - L1M4c LINE L1 -1836 4808 4163 3528 214 17 8 chr2 53998816 53999689 -196688165 + L1 LINE L1 4316 5196 -950 3907 272 59 34 chr2 53999690 54000362 -196687492 - L1M4c LINE L1 -3248 3396 2742 426 39 0 0 chr2 54000362 54000414 -196687440 + (TG)n Simple_repeat Simple_repeat 2 53 0 3907 272 59 34 chr2 54000414 54002910 -196684944 - L1M4c LINE L1 -3902 2742 34 26 0 0 0 chr2 54004016 54004042 -196683812 + AT_rich Low_complexity Low_complexity 1 26 0 236 253 17 84 chr2 54004535 54004677 -196683177 - MIR SINE MIR -56 206 76 1145 202 20 12 chr2 54006245 54006498 -196681356 - L1 LINE L1 -2003 4143 3889 * 4063 185 55 38 chr2 54006484 54007639 -196680215 + L1MA9 LINE L1 5005 6156 -156 625 328 114 8 chr2 54007664 54008057 -196679797 + ERVL LTR ERVL 3594 4028 -1736 772 338 23 32 chr2 54008109 54008541 -196679313 + ERVL LTR ERVL 4155 4582 -1072 2114 113 11 0 chr2 54010293 54010604 -196677250 + AluSx SINE Alu 1 314 0 1398 235 31 48 chr2 54011152 54011544 -196676310 + MLT1B LTR MaLR 4 388 -2 27 0 0 0 chr2 54011669 54011696 -196676158 + AT_rich Low_complexity Low_complexity 1 27 0 244 208 19 0 chr2 54012090 54012196 -196675658 + (TA)n Simple_repeat Simple_repeat 1 108 0 730 288 84 103 chr2 54012865 54013557 -196674297 - MER21B LTR ERV1 -157 706 28 39 22 0 0 chr2 54014675 54014721 -196673133 + AT_rich Low_complexity Low_complexity 1 46 0 333 47 0 0 chr2 54014749 54014792 -196673062 + (CA)n Simple_repeat Simple_repeat 2 44 0 1172 235 78 57 chr2 54014840 54015340 -196672514 - MER39 LTR ERV1 -9 686 9 1562 217 77 72 chr2 54015488 54016045 -196671809 + MER34C LTR ERV1 26 585 0 306 73 0 0 chr2 54016074 54016115 -196671739 + (TG)n Simple_repeat Simple_repeat 2 42 0 318 243 139 85 chr2 54016800 54016925 -196670929 + HAL1 LINE L1 884 1001 -1506 4240 125 29 13 chr2 54016925 54017605 -196670249 + LTR8 LTR ERV1 1 691 0 318 243 139 85 chr2 54017605 54017738 -196670116 + HAL1 LINE L1 1001 1156 -1351 1101 151 5 5 chr2 54017771 54017963 -196669891 - AluSg/x SINE Alu 0 312 121 592 279 11 33 chr2 54017963 54018239 -196669615 - AluSq SINE Alu -7 306 37 430 286 23 8 chr2 54018241 54018374 -196669480 - AluYa5 SINE Alu -166 135 1 987 188 19 62 chr2 54018665 54018839 -196669015 - AluSg SINE Alu -5 295 138 2077 95 0 14 chr2 54018839 54019124 -196668730 - AluSq SINE Alu 0 313 33 987 188 19 62 chr2 54019124 54019257 -196668597 - AluSg SINE Alu -162 138 1 308 268 8 49 chr2 54019458 54019581 -196668273 + LTR8A LTR ERV1 171 288 -439 824 201 96 78 chr2 54019611 54019944 -196667910 + LTR8A LTR ERV1 286 624 -103 744 169 0 0 chr2 54021130 54021274 -196666580 - FLAM_C SINE Alu 0 144 1 25 0 0 0 chr2 54021979 54022004 -196665850 + AT_rich Low_complexity Low_complexity 1 25 0 1849 97 12 8 chr2 54022788 54023047 -196664807 - AluSq SINE Alu 0 313 54 1663 255 147 23 chr2 54023078 54023846 -196664008 + L1MC3 LINE L1 5463 6325 -1460 701 248 20 0 chr2 54023837 54024035 -196663819 + L1MD3 LINE L1 7770 7971 -24 * 763 245 56 7 chr2 54024071 54024340 -196663514 - L1M4 LINE L1 -1491 5466 5185 507 250 35 30 chr2 54024473 54024673 -196663181 - L1M4 LINE L1 -5327 1532 1332 340 252 19 28 chr2 54025483 54025590 -196662264 - MER113 DNA MER1_type? -146 375 270 22 0 0 0 chr2 54025676 54025698 -196662156 + AT_rich Low_complexity Low_complexity 1 22 0 202 300 0 0 chr2 54025766 54025772 -196662082 + (TA)n Simple_repeat Simple_repeat 2 7 -54 1203 212 59 82 chr2 54025772 54026196 -196661658 + MLT2D LTR ERVL 1 414 0 202 300 0 0 chr2 54026196 54026249 -196661605 + (TA)n Simple_repeat Simple_repeat 6 61 0 28 48 0 0 chr2 54026623 54026665 -196661189 + AT_rich Low_complexity Low_complexity 1 42 0 215 209 0 0 chr2 54027614 54027657 -196660197 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 194 174 72 29 chr2 54029290 54029359 -196658495 - L3 LINE CR1 -284 1293 1222 429 270 50 87 chr2 54030359 54030600 -196657254 + Charlie2b DNA MER1_type 6 237 -2625 263 215 38 13 chr2 54030661 54030740 -196657114 + Charlie2b DNA MER1_type 554 634 -2148 246 105 0 0 chr2 54030800 54030838 -196657016 + (TC)n Simple_repeat Simple_repeat 1 38 0 266 207 81 45 chr2 54030972 54031083 -196656771 + Charlie2a DNA MER1_type 1499 1613 -1249 182 171 24 0 chr2 54031105 54031146 -196656708 + (TAA)n Simple_repeat Simple_repeat 3 44 0 27 0 0 0 chr2 54031336 54031363 -196656491 + AT_rich Low_complexity Low_complexity 1 27 0 451 319 71 11 chr2 54031484 54031666 -196656188 - MIR3 SINE MIR -6 202 10 515 298 31 24 chr2 54032413 54032668 -196655186 + MIR SINE MIR 2 258 -4 457 332 168 10 chr2 54033042 54033428 -196654426 + HAL1 LINE L1 92 538 -1969 1896 296 105 39 chr2 54033586 54035134 -196652720 + HAL1 LINE L1 857 2506 -1 643 99 0 0 chr2 54037069 54037160 -196650694 + AluY SINE Alu 212 302 -9 214 145 53 40 chr2 54038951 54039027 -196648827 + (TATAA)n Simple_repeat Simple_repeat 4 80 0 372 275 45 30 chr2 54039035 54039235 -196648619 + L1 LINE L1 2408 2610 -3536 390 74 0 0 chr2 54039413 54039467 -196648387 + (TA)n Simple_repeat Simple_repeat 1 54 0 4668 158 49 65 chr2 54039591 54040745 -196647109 - L1MA9 LINE L1 -6 6306 5164 2977 184 41 33 chr2 54040749 54041483 -196646371 + L1 LINE L1 4153 4892 -1254 303 261 115 35 chr2 54041548 54041774 -196646080 + L1ME3 LINE L1 1495 1738 -4658 546 192 10 0 chr2 54041861 54041965 -196645889 + FLAM_C SINE Alu 23 127 -16 614 340 66 18 chr2 54042083 54042463 -196645391 + L1ME3 LINE L1 2010 2407 -3989 956 288 174 24 chr2 54042494 54043889 -196643965 + L1ME3 LINE L1 2428 4030 -2185 793 333 40 16 chr2 54044007 54044457 -196643397 + L1ME3 LINE L1 5575 6035 -196 1961 128 17 17 chr2 54044734 54045031 -196642823 - AluSx SINE Alu -15 297 1 476 346 58 33 chr2 54045135 54045617 -196642237 + L1ME1 LINE L1 5439 5932 -234 23 0 0 0 chr2 54045700 54045723 -196642131 + AT_rich Low_complexity Low_complexity 1 23 0 271 202 12 24 chr2 54045755 54045839 -196642015 + (TA)n Simple_repeat Simple_repeat 1 83 0 180 0 0 0 chr2 54045888 54045908 -196641946 + (TA)n Simple_repeat Simple_repeat 2 21 0 824 141 8 0 chr2 54046184 54046305 -196641549 - MSTB LTR MaLR -1 425 304 22 56 0 0 chr2 54046311 54046347 -196641507 + AT_rich Low_complexity Low_complexity 1 36 0 334 236 188 6 chr2 54046390 54046555 -196641299 - Charlie7 DNA MER1_type -1568 1044 850 2872 195 12 0 chr2 54046555 54047119 -196640735 - L1P LINE L1 -1594 4552 3982 3263 132 53 12 chr2 54047121 54047682 -196640172 + L1PA15 LINE L1 5580 6163 -2 236 273 160 46 chr2 54047682 54047876 -196639978 - Charlie7 DNA MER1_type -1748 864 649 716 340 49 19 chr2 54047908 54048350 -196639504 - Charlie7 DNA MER1_type -2061 551 88 2026 111 0 4 chr2 54048350 54048662 -196639192 + AluSx SINE Alu 14 324 0 716 340 49 19 chr2 54048662 54048753 -196639101 - Charlie7 DNA MER1_type -2524 88 1 2106 98 3 0 chr2 54049412 54049699 -196638155 + AluSg SINE Alu 1 288 -22 417 39 0 0 chr2 54050919 54050970 -196636884 + (CA)n Simple_repeat Simple_repeat 2 52 0 327 282 16 65 chr2 54052179 54052303 -196635551 + MER69 DNA AcHobo 2 119 -2407 288 276 66 33 chr2 54052298 54052479 -196635375 + MER69 DNA AcHobo 2339 2525 -1 * 228 111 0 0 chr2 54052839 54052875 -196634979 + (T)n Simple_repeat Simple_repeat 1 36 0 328 279 128 17 chr2 54054135 54054307 -196633547 + MIR SINE MIR 57 247 -15 185 256 0 0 chr2 54054956 54054995 -196632859 + L2 LINE L2 3264 3302 -11 22 0 0 0 chr2 54054999 54055021 -196632833 + AT_rich Low_complexity Low_complexity 1 22 0 403 362 12 0 chr2 54055389 54055552 -196632302 + MIR SINE MIR 5 169 -93 21 36 0 0 chr2 54056053 54056081 -196631773 + AT_rich Low_complexity Low_complexity 1 28 0 622 315 42 4 chr2 54057025 54057263 -196630591 - MIR SINE MIR -10 252 6 180 0 0 0 chr2 54057649 54057669 -196630185 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 875 255 30 5 chr2 54057861 54058061 -196629793 - MLT1A1 LTR MaLR 0 365 161 2354 62 7 10 chr2 54058078 54058382 -196629472 - AluY SINE Alu -7 304 2 20857 29 4 1 chr2 54058914 54062178 -196625676 - L1PA3 LINE L1 -69 6086 2816 35 78 0 0 chr2 54062307 54062384 -196625470 + AT_rich Low_complexity Low_complexity 1 77 0 442 329 31 0 chr2 54062519 54062680 -196625174 + MIR SINE MIR 90 255 -7 212 333 0 0 chr2 54063998 54064073 -196623781 + (CA)n Simple_repeat Simple_repeat 1 75 0 206 307 78 60 chr2 54064317 54064483 -196623371 + L3 LINE CR1 1106 1274 -303 233 316 117 41 chr2 54065523 54065719 -196622135 + L3 LINE CR1 1240 1450 -127 235 330 22 0 chr2 54065925 54066016 -196621838 - Charlie7 DNA MER1_type -2511 101 9 251 98 66 0 chr2 54066896 54066957 -196620897 + GA-rich Low_complexity Low_complexity 2 66 0 1250 119 0 0 chr2 54067650 54067826 -196620028 + AluSg/x SINE Alu 129 304 -8 293 331 97 6 chr2 54068015 54068190 -196619664 + MER117 DNA MER1_type 2 192 -5 815 212 35 19 chr2 54069712 54069948 -196617906 - L1MA4 LINE L1 -3 6302 6069 257 321 56 12 chr2 54072076 54072238 -196615616 - L1MC/D LINE L1 -694 5648 5480 404 311 71 24 chr2 54072268 54072692 -196615162 - L1MC/D LINE L1 -1158 4971 4528 969 215 62 91 chr2 54072698 54073038 -196614816 + MER2 DNA MER2_type 8 337 -8 1461 141 21 0 chr2 54073110 54073344 -196614510 - L1PB1 LINE L1 -7 6144 5906 205 183 17 33 chr2 54073428 54073488 -196614366 + T-rich Low_complexity Low_complexity 5 63 0 243 0 0 0 chr2 54073500 54073527 -196614327 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2543 11 3 0 chr2 54073533 54073820 -196614034 - AluYb8 SINE Alu -30 288 1 416 317 63 23 chr2 54073883 54074186 -196613668 - L1MC/D LINE L1 -4910 1209 895 197 32 0 32 chr2 54074383 54074414 -196613440 + (TTA)n Simple_repeat Simple_repeat 1 30 0 6555 77 10 0 chr2 54074416 54075529 -196612325 - L1PA7 LINE L1 -38 6116 4996 454 272 75 69 chr2 54077008 54077181 -196610673 + MIR SINE MIR 2 175 -87 22 0 0 0 chr2 54077198 54077220 -196610634 + AT_rich Low_complexity Low_complexity 1 22 0 402 312 19 32 chr2 54077299 54077456 -196610398 + MIR SINE MIR 34 188 -74 718 111 28 50 chr2 54077762 54077943 -196609911 + GA-rich Low_complexity Low_complexity 1 177 0 247 232 0 29 chr2 54077987 54078056 -196609798 + L1MC/D LINE L1 5694 5760 -2048 242 183 118 43 chr2 54078061 54078154 -196609700 + L1MC/D LINE L1 5695 5794 -2014 911 263 29 5 chr2 54078757 54078962 -196608892 - MER20 DNA MER1_type -2 217 8 1995 157 94 13 chr2 54079039 54079434 -196608420 + MSTA LTR MaLR 2 428 0 975 151 6 0 chr2 54079800 54079979 -196607875 - L1MA8 LINE L1 -6 6285 6106 29 47 0 0 chr2 54080405 54080448 -196607406 + AT_rich Low_complexity Low_complexity 1 43 0 373 297 86 29 chr2 54082679 54082854 -196605000 - MIR SINE MIR -74 188 4 298 298 21 21 chr2 54083178 54083272 -196604582 - MIR SINE MIR -90 172 79 195 114 97 18 chr2 54084701 54084815 -196603039 + (TTATA)n Simple_repeat Simple_repeat 5 127 0 311 239 26 0 chr2 54084815 54084943 -196602911 + (TTATA)n Simple_repeat Simple_repeat 1 131 0 232 320 95 54 chr2 54086843 54086990 -196600864 - L2 LINE L2 -5 3267 3115 381 331 29 29 chr2 54086998 54087173 -196600681 - MIR SINE MIR -27 235 61 2785 217 80 6 chr2 54087173 54087892 -196599962 + L1MD1 LINE L1 5336 6234 -8 1318 251 65 64 chr2 54087895 54088676 -196599178 + L1ME1 LINE L1 2274 3055 -3091 * 2208 246 49 53 chr2 54088675 54089900 -196597954 + L1ME1 LINE L1 4768 5998 -168 4443 174 74 20 chr2 54089939 54090426 -196597428 + L1MA8 LINE L1 5256 5716 -575 243 61 0 0 chr2 54090426 54090459 -196597395 + (CA)n Simple_repeat Simple_repeat 2 34 0 4443 174 74 20 chr2 54090459 54090945 -196596909 + L1MA8 LINE L1 5716 6281 -10 247 307 18 0 chr2 54090984 54091098 -196596756 + L1MA10 LINE L1 6211 6326 -8 2291 172 10 11 chr2 54091784 54092194 -196595660 - MSTB1 LTR MaLR -2 419 20 25 90 0 0 chr2 54092432 54092499 -196595355 + AT_rich Low_complexity Low_complexity 1 67 0 33233 62 3 5 chr2 54092674 54097864 -196589990 - L1PA5 LINE L1 0 6154 978 5804 200 14 19 chr2 54098037 54099151 -196588703 + L1MA3 LINE L1 16 1124 -6441 2480 158 20 0 chr2 54099155 54099553 -196588301 - MSTA LTR MaLR 0 428 23 2924 218 19 16 chr2 54099571 54100194 -196587660 - MSTA-int LTR MaLR -14 1637 1013 2696 207 13 13 chr2 54100203 54100840 -196587014 + L1MA3 LINE L1 6059 6695 -870 381 138 58 227 chr2 54100844 54100939 -196586915 + L1MA3 LINE L1 6674 6767 -957 246 143 0 0 chr2 54100939 54100988 -196586866 + Alu SINE Alu 118 166 0 381 138 58 227 chr2 54100988 54101069 -196586785 + L1MA3 LINE L1 6767 6860 -864 10003 192 89 19 chr2 54101070 54107301 -196580553 + L1PB1 LINE L1 15 6860 -7 2432 153 9 20 chr2 54107331 54107770 -196580084 + L1MA3 LINE L1 6847 7280 -444 1303 223 11 8 chr2 54107774 54108034 -196579820 - MSTB LTR MaLR -165 261 1 427 171 13 0 chr2 54108034 54108110 -196579744 - L1M2 LINE L1 -6772 77 1 2775 7 0 0 chr2 54108248 54108552 -196579302 - AluY SINE Alu -7 304 1 626 327 22 9 chr2 54108860 54109086 -196578768 + MIR SINE MIR 32 260 -2 341 282 106 11 chr2 54110387 54110575 -196577279 + L1MC5 LINE L1 7023 7228 -733 431 256 88 44 chr2 54110711 54110961 -196576893 + L1MC5 LINE L1 7312 7572 -389 966 42 0 0 chr2 54111775 54111894 -196575960 + (TGG)n Simple_repeat Simple_repeat 3 121 0 2020 57 57 0 chr2 54112736 54113017 -196574837 - AluY SINE Alu -14 297 1 330 26 0 0 chr2 54113588 54113627 -196574227 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 749 226 0 24 chr2 54113673 54113841 -196574013 - FRAM SINE Alu -12 164 1 28 0 0 0 chr2 54115086 54115114 -196572740 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 54115419 54115448 -196572406 + AT_rich Low_complexity Low_complexity 1 29 0 1550 247 14 65 chr2 54115491 54116134 -196571720 + HAL1b LINE L1 323 932 -416 21 36 0 0 chr2 54117894 54117922 -196569932 + AT_rich Low_complexity Low_complexity 1 28 0 180 219 0 0 chr2 54118428 54118469 -196569385 + GA-rich Low_complexity Low_complexity 1 41 0 375 299 12 48 chr2 54118670 54118837 -196569017 - MLT1J2 LTR MaLR -289 161 1 223 382 71 12 chr2 54119938 54120108 -196567746 - L2 LINE L2 -540 2774 2595 34 55 0 0 chr2 54121117 54121172 -196566682 + AT_rich Low_complexity Low_complexity 1 55 0 234 0 0 0 chr2 54121972 54121998 -196565856 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1616 134 0 4 chr2 54122013 54122251 -196565603 - AluSc SINE Alu -72 237 1 183 250 0 0 chr2 54123228 54123264 -196564590 - L2 LINE L2 -36 3236 3201 23 0 0 0 chr2 54123923 54123946 -196563908 + AT_rich Low_complexity Low_complexity 1 23 0 234 269 0 0 chr2 54124244 54124311 -196563543 + T-rich Low_complexity Low_complexity 1 67 0 198 366 141 38 chr2 54124341 54124816 -196563038 - L2 LINE L2 -1109 2205 1682 1378 268 57 13 chr2 54125197 54125656 -196562198 - L1ME2 LINE L1 -9 6155 5680 22 35 0 0 chr2 54127034 54127063 -196560791 + AT_rich Low_complexity Low_complexity 1 29 0 240 261 0 79 chr2 54127727 54127839 -196560015 + MIR SINE MIR 32 128 -80 1001 83 0 0 chr2 54127983 54128115 -196559739 - AluY SINE Alu 0 311 180 1811 53 0 18 chr2 54128115 54128340 -196559514 - AluY SINE Alu -90 221 1 370 270 216 7 chr2 54129090 54129238 -196558616 - MER5A DNA MER1_type 0 189 11 241 296 99 0 chr2 54129635 54129706 -196558148 + L1ME LINE L1 5527 5604 -517 25 83 0 0 chr2 54129850 54129910 -196557944 + AT_rich Low_complexity Low_complexity 1 60 0 4261 168 15 3 chr2 54129934 54130655 -196557199 + Tigger1 DNA MER2_type 41 770 -1648 1538 160 33 10 chr2 54130767 54131067 -196556787 + Tigger1 DNA MER2_type 1095 1401 -1017 * 2098 157 35 5 chr2 54131065 54131440 -196556414 + Tigger1 DNA MER2_type 2033 2418 0 448 130 32 89 chr2 54131697 54131734 -196556120 - L1MA8 LINE L1 -3 6288 6250 255 61 0 0 chr2 54131734 54131767 -196556087 + (TG)n Simple_repeat Simple_repeat 2 34 0 448 130 32 89 chr2 54131767 54131852 -196556002 - L1MA8 LINE L1 -41 6250 6173 408 301 7 46 chr2 54133030 54133183 -196554671 + MER3 DNA MER1_type 44 190 -19 573 202 0 48 chr2 54135278 54135396 -196552458 + FLAM_C SINE Alu 6 138 0 226 0 0 0 chr2 54135396 54135421 -196552433 + (CAA)n Simple_repeat Simple_repeat 3 180 0 1523 228 57 36 chr2 54135656 54136151 -196551703 + MLT1D LTR MaLR 1 505 0 2308 95 0 0 chr2 54136771 54137066 -196550788 + AluY SINE Alu 3 297 -14 10736 197 34 19 chr2 54137256 54139657 -196548197 + L1M4c LINE L1 19 2456 -3928 890 66 0 0 chr2 54139657 54139778 -196548076 + AluY SINE Alu 191 311 0 414 248 9 0 chr2 54139783 54139896 -196547958 + L1M4c LINE L1 2450 2563 -3819 1307 164 13 72 chr2 54139908 54140226 -196547628 + L1MB3 LINE L1 5882 6180 -3 25 0 0 0 chr2 54140331 54140356 -196547498 + AT_rich Low_complexity Low_complexity 1 25 0 189 368 40 0 chr2 54140460 54140536 -196547318 + L2 LINE L2 2542 2620 -694 268 324 56 9 chr2 54140778 54140886 -196546968 + L2 LINE L2 2900 3012 -260 462 229 9 9 chr2 54140896 54141005 -196546849 + MER94 DNA DNA 9 117 -17 201 254 0 16 chr2 54143128 54143191 -196544663 + T-rich Low_complexity Low_complexity 2 63 0 212 98 59 20 chr2 54143365 54143416 -196544438 + (TA)n Simple_repeat Simple_repeat 2 54 0 25 0 0 0 chr2 54143483 54143508 -196544346 + AT_rich Low_complexity Low_complexity 1 25 0 219 302 93 31 chr2 54144194 54144323 -196543531 - MIR SINE MIR 0 262 126 2457 64 0 0 chr2 54144323 54144619 -196543235 + AluY SINE Alu 1 296 -15 40 0 0 0 chr2 54144619 54144659 -196543195 + AT_rich Low_complexity Low_complexity 1 40 0 341 185 0 0 chr2 54146306 54146371 -196541483 - L1MA9 LINE L1 -344 5968 5904 1531 98 5 0 chr2 54146677 54146880 -196540974 + AluY SINE Alu 9 212 -99 20426 127 13 3 chr2 54146884 54147182 -196540672 + L1PA8A LINE L1 2008 2302 -3829 207 0 0 0 chr2 54147182 54147205 -196540649 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 20426 127 13 3 chr2 54147205 54150985 -196536869 + L1PA8A LINE L1 2302 6124 -7 180 380 0 0 chr2 54151726 54151797 -196536057 - MIR SINE MIR -140 122 52 433 165 13 0 chr2 54152087 54152166 -196535688 - MADE1 DNA Mariner 0 80 1 24 67 0 0 chr2 54152202 54152247 -196535607 + AT_rich Low_complexity Low_complexity 1 45 0 2554 289 37 48 chr2 54153506 54155632 -196532222 - ERVL LTR ERVL -2840 2924 763 35 63 0 0 chr2 54156061 54156124 -196531730 + AT_rich Low_complexity Low_complexity 1 63 0 180 0 0 0 chr2 54156263 54156283 -196531571 + (A)n Simple_repeat Simple_repeat 1 20 0 717 141 6 8 chr2 54156842 54156975 -196530879 - L1MB8 LINE L1 0 6164 6026 266 265 253 16 chr2 54156975 54157228 -196530626 - L1MEc LINE L1 -4683 1627 1315 1828 202 177 8 chr2 54157229 54157714 -196530140 + MLT1F1 LTR MaLR 1 567 0 370 252 8 34 chr2 54157742 54157784 -196530070 - L1ME3A LINE L1 -11 6159 6117 2335 190 14 2 chr2 54157784 54158205 -196529649 + MSTB LTR MaLR 1 426 0 370 252 8 34 chr2 54158205 54158281 -196529573 - L1ME3A LINE L1 -53 6117 6044 888 234 95 54 chr2 54158312 54158631 -196529223 - L1MEc LINE L1 -4866 1253 906 1772 156 40 3 chr2 54158631 54158952 -196528902 - MER44D DNA MER2_type -2 607 5 888 234 95 54 chr2 54158952 54159116 -196528738 - L1MEc LINE L1 -5213 906 750 1967 125 7 0 chr2 54161054 54161381 -196526473 - AluSx SINE Alu 0 329 1 643 261 108 5 chr2 54161789 54161992 -196525862 + MER58A DNA MER1_type 1 224 0 253 309 41 10 chr2 54163459 54163556 -196524298 - MIR3 SINE MIR -18 190 91 201 240 13 80 chr2 54163695 54163770 -196524084 - L2 LINE L2 -92 3221 3152 1086 306 74 23 chr2 54163820 54163913 -196523941 - L2 LINE L2 -135 3178 3091 539 125 0 0 chr2 54163913 54163993 -196523861 + MADE1 DNA Mariner 1 80 0 1086 306 74 23 chr2 54163993 54164456 -196523398 - L2 LINE L2 -222 3091 2589 202 369 139 8 chr2 54164569 54164691 -196523163 + MIR SINE MIR 10 147 -115 2237 100 0 3 chr2 54165478 54165811 -196522043 - AluY SINE Alu 0 334 3 329 327 78 69 chr2 54165925 54166231 -196521623 + L2 LINE L2 3005 3313 0 1932 186 12 3 chr2 54166562 54166906 -196520948 + MER7A DNA MER2_type 2 346 0 927 235 201 93 chr2 54167315 54167897 -196519957 + MLT1E1 LTR MaLR 1 645 -9 191 367 44 52 chr2 54169301 54169530 -196518324 - L2 LINE L2 -215 3057 2831 855 78 0 0 chr2 54169575 54169691 -196518163 + (TA)n Simple_repeat Simple_repeat 2 117 0 2538 40 0 3 chr2 54170583 54170880 -196516974 + AluY SINE Alu 1 296 -15 25 83 0 0 chr2 54171365 54171425 -196516429 + AT_rich Low_complexity Low_complexity 1 60 0 893 200 27 0 chr2 54172087 54172272 -196515582 - AluJo SINE Alu -3 309 120 444 290 93 21 chr2 54172278 54172471 -196515383 - MIR SINE MIR -55 207 1 25 65 0 0 chr2 54172847 54172893 -196514961 + AT_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr2 54173389 54173418 -196514436 + AT_rich Low_complexity Low_complexity 1 29 0 297 139 28 14 chr2 54173585 54173657 -196514197 + CT-rich Low_complexity Low_complexity 1 73 0 23 33 0 0 chr2 54173740 54173770 -196514084 + AT_rich Low_complexity Low_complexity 1 30 0 513 254 97 51 chr2 54173915 54174305 -196513549 - L1MC5 LINE L1 -49 7912 7505 243 191 91 91 chr2 54174400 54174510 -196513344 - L1MC4 LINE L1 -547 7495 7386 710 282 50 51 chr2 54174563 54175149 -196512705 - L1MC4 LINE L1 -733 7228 6675 279 160 0 0 chr2 54175369 54175444 -196512410 + (TA)n Simple_repeat Simple_repeat 2 76 0 303 288 155 84 chr2 54175488 54175915 -196511939 - L1MC4a LINE L1 -1449 6359 5903 207 178 44 0 chr2 54176309 54176354 -196511500 + GA-rich Low_complexity Low_complexity 2 48 0 9357 106 7 1 chr2 54176771 54178146 -196509708 + L1P LINE L1 3025 4408 -1738 348 217 0 12 chr2 54179139 54179222 -196508632 + L1MB8 LINE L1 6096 6177 -1 228 258 92 8 chr2 54179331 54179451 -196508403 + L1P5 LINE L1 5314 5443 -713 328 333 41 3 chr2 54179667 54179870 -196507984 - L1ME1 LINE L1 -4 6162 5949 395 233 69 0 chr2 54179871 54179987 -196507867 - L1ME1 LINE L1 -287 5875 5752 1661 181 71 11 chr2 54179989 54180454 -196507400 - L1M4c LINE L1 -2777 3605 3113 708 235 26 0 chr2 54180454 54180607 -196507247 + Tigger2 DNA MER2_type 2562 2718 0 274 283 6 0 chr2 54180647 54180812 -196507042 - L1M4c LINE L1 -4393 1989 1818 1124 229 0 45 chr2 54180812 54181078 -196506776 + AluJo SINE Alu 1 254 -58 384 218 0 9 chr2 54181116 54181228 -196506626 - L1M4c LINE L1 -4516 1787 1322 198 0 0 0 chr2 54181228 54181250 -196506604 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 856 159 0 0 chr2 54181253 54181385 -196506469 - AluJb SINE Alu -180 132 1 2521 276 71 73 chr2 54181385 54181825 -196506029 - L1 LINE L1 -4569 1322 882 221 56 0 28 chr2 54181825 54181861 -196505993 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2521 276 71 73 chr2 54181861 54182745 -196505109 - L1 LINE L1 -5009 882 1 931 274 108 60 chr2 54182939 54183623 -196504231 - L1M4 LINE L1 -1641 4505 3761 2047 134 3 6 chr2 54183623 54183936 -196503918 - AluSp SINE Alu -1 312 1 931 274 108 60 chr2 54183936 54184200 -196503654 - L1M4 LINE L1 -2385 3761 3511 236 358 21 11 chr2 54185150 54185245 -196502609 - MER5B DNA MER1_type -82 96 1 695 223 57 0 chr2 54185330 54185487 -196502367 - MER20 DNA MER1_type 0 219 54 1457 167 111 48 chr2 54186221 54186574 -196501280 + THE1C LTR MaLR 1 375 0 320 301 75 60 chr2 54190290 54190489 -196497365 - L2 LINE L2 -32 3281 3080 1765 205 56 45 chr2 54190493 54191029 -196496825 - L1MB7 LINE L1 0 6184 5643 1348 209 93 60 chr2 54191029 54191427 -196496427 - MER67D LTR ERV1 0 514 104 20825 29 2 0 chr2 54191452 54194741 -196493113 - L1PA2 LINE L1 0 6155 2873 8992 54 1 8 chr2 54194741 54196078 -196491776 + L1P LINE L1 592 2046 -4100 483 114 105 86 chr2 54196079 54196184 -196491670 + MSTD LTR MaLR 290 396 0 863 179 43 0 chr2 54196206 54196390 -196491464 - L1MB7 LINE L1 -704 5474 5283 26 0 0 0 chr2 54197064 54197090 -196490764 + AT_rich Low_complexity Low_complexity 1 26 0 201 259 0 0 chr2 54197770 54197824 -196490030 - MIR SINE MIR -120 142 89 393 327 0 0 chr2 54198035 54198136 -196489718 - MIR SINE MIR -113 149 49 21 0 0 0 chr2 54198291 54198312 -196489542 + AT_rich Low_complexity Low_complexity 1 21 0 954 311 18 6 chr2 54198437 54198768 -196489086 + L1MEc LINE L1 37 371 -6025 960 301 87 16 chr2 54198779 54199506 -196488348 + L1MEc LINE L1 672 1449 -4947 6749 134 21 14 chr2 54199766 54201927 -196485927 - L1MA1 LINE L1 -16 6286 4109 1547 270 78 25 chr2 54201942 54203001 -196484853 - L1ME3 LINE L1 -163 6235 5127 255 294 25 8 chr2 54203212 54203331 -196484523 - L1ME3 LINE L1 -4999 1385 1265 2047 109 0 0 chr2 54204730 54204995 -196482859 + AluSg SINE Alu 1 265 -45 291 283 68 26 chr2 54205000 54205191 -196482663 + L1ME LINE L1 5546 5744 -377 5418 161 32 27 chr2 54205470 54206893 -196480961 - L1PB1 LINE L1 0 6151 4720 207 0 0 0 chr2 54206893 54206916 -196480938 + (TA)n Simple_repeat Simple_repeat 2 24 0 5418 161 32 27 chr2 54206916 54207381 -196480473 - L1PB1 LINE L1 -1431 4720 4259 21 36 0 0 chr2 54207402 54207430 -196480424 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 54208766 54208802 -196479052 + AT_rich Low_complexity Low_complexity 1 36 0 2810 16 0 0 chr2 54208980 54209290 -196478564 - AluYa5 SINE Alu -1 310 1 183 147 29 0 chr2 54209592 54209626 -196478228 - MIR SINE MIR 0 262 228 789 220 138 41 chr2 54209654 54209952 -196477902 - MER57A LTR ERV1 0 403 104 6602 78 3 12 chr2 54210098 54211190 -196476664 - L1PA7 LINE L1 -4 6150 5062 2579 40 0 3 chr2 54211812 54212109 -196475745 - AluY SINE Alu -15 296 1 200 360 11 45 chr2 54212170 54212259 -196475595 - MIR3 SINE MIR -120 88 3 280 310 23 0 chr2 54213904 54213991 -196473863 - MIR SINE MIR -109 153 65 341 230 38 50 chr2 54214219 54214291 -196473563 + L1M3b LINE L1 8 79 -6496 396 40 0 0 chr2 54214291 54214341 -196473513 + (CA)n Simple_repeat Simple_repeat 2 51 0 341 230 38 50 chr2 54214341 54214429 -196473425 + L1M3b LINE L1 79 354 -6221 1845 266 28 41 chr2 54214847 54215596 -196472258 + L1M4 LINE L1 2439 3177 -2969 18930 180 43 19 chr2 54215605 54218087 -196469767 + L1MA2 LINE L1 23 2647 -4918 1630 180 3 18 chr2 54218087 54218414 -196469440 - AluSx SINE Alu 0 325 3 18930 180 43 19 chr2 54218414 54219979 -196467875 + L1MA2 LINE L1 2647 4172 -3393 5989 169 30 16 chr2 54219976 54222251 -196465603 + L1MA2 LINE L1 5417 7723 0 * 8655 217 14 17 chr2 54222292 54223158 -196464696 - L1PA15 LINE L1 -3 6162 5295 2156 113 17 0 chr2 54223158 54223458 -196464396 - AluSg SINE Alu -5 305 1 8655 217 14 17 chr2 54223458 54225527 -196462327 - L1PA15 LINE L1 -870 5295 3207 22 0 0 0 chr2 54225552 54225574 -196462280 + AT_rich Low_complexity Low_complexity 1 22 0 271 271 0 0 chr2 54225821 54225880 -196461974 + GA-rich Low_complexity Low_complexity 1 59 0 225 277 119 45 chr2 54226427 54226604 -196461250 + L2 LINE L2 3121 3310 -3 405 247 53 40 chr2 54226988 54227138 -196460716 - MIR SINE MIR 0 262 111 222 105 0 0 chr2 54227934 54227972 -196459882 + (GGAA)n Simple_repeat Simple_repeat 4 41 0 31 82 0 0 chr2 54228041 54228114 -196459740 + AT_rich Low_complexity Low_complexity 1 73 0 2714 101 3 3 chr2 54228165 54228540 -196459314 - THE1C LTR MaLR 0 375 1 1449 254 14 14 chr2 54228541 54228896 -196458958 - MLT1A1 LTR MaLR 0 365 11 1346 248 65 104 chr2 54228949 54229553 -196458301 + L1M3b LINE L1 422 1001 -5574 180 0 0 0 chr2 54229580 54229600 -196458254 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 2362 144 28 30 chr2 54229600 54230071 -196457783 + L1MA6 LINE L1 5824 6293 -7 22 0 0 0 chr2 54231205 54231227 -196456627 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 54231728 54231751 -196456103 + AT_rich Low_complexity Low_complexity 1 23 0 5643 114 22 0 chr2 54231758 54232557 -196455297 - L1P3 LINE L1 -5642 819 3 24867 145 11 20 chr2 54232563 54236803 -196451051 + L1PA12 LINE L1 1148 6178 -1406 26 82 0 0 chr2 54237221 54237282 -196450572 + AT_rich Low_complexity Low_complexity 1 61 0 213 178 0 0 chr2 54237865 54237910 -196449944 + (TATG)n Simple_repeat Simple_repeat 4 48 0 22 117 0 0 chr2 54237944 54238064 -196449790 + AT_rich Low_complexity Low_complexity 1 120 0 1579 241 72 97 chr2 54238617 54239384 -196448470 - L1ME3A LINE L1 -62 6108 5361 342 244 117 48 chr2 54239402 54239761 -196448093 - L1ME LINE L1 -536 5585 5197 824 221 14 116 chr2 54240018 54240294 -196447560 - MLT2B1 LTR ERVL -35 485 238 368 204 204 29 chr2 54240290 54240381 -196447473 - MLT2B1 LTR ERVL -399 121 9 * 3662 188 38 10 chr2 54240381 54241094 -196446760 + MER44D DNA MER2_type 1 605 0 368 204 204 29 chr2 54241094 54241105 -196446749 - MLT2B1 LTR ERVL -511 9 1 1842 278 67 38 chr2 54241123 54241943 -196445911 + L1ME1 LINE L1 5317 6160 -6 385 241 9 46 chr2 54242025 54242133 -196445721 + L1MC5 LINE L1 7311 7414 -547 182 381 36 36 chr2 54242390 54242558 -196445296 + MER5A DNA MER1_type 19 186 -3 468 303 64 14 chr2 54242959 54243177 -196444677 + L1ME LINE L1 5563 5791 -330 30 77 0 0 chr2 54244004 54244069 -196443785 + AT_rich Low_complexity Low_complexity 1 65 0 204 40 0 0 chr2 54244331 54244356 -196443498 + (T)n Simple_repeat Simple_repeat 1 25 0 7745 14 0 0 chr2 54244364 54245253 -196442601 - L1HS LINE L1 0 6155 5267 402 83 97 14 chr2 54246196 54246268 -196441586 - MADE1 DNA Mariner 0 80 3 506 196 10 0 chr2 54246521 54246618 -196441236 - MLT1E3 LTR MaLR -526 98 1 238 231 0 0 chr2 54247330 54247382 -196440472 - L2 LINE L2 0 3272 3221 2146 156 8 16 chr2 54247991 54248369 -196439485 + THE1C LTR MaLR 1 375 0 9141 135 50 12 chr2 54248369 54249892 -196437962 + THE1C-int LTR MaLR 1 1580 0 1796 160 47 25 chr2 54249896 54250259 -196437595 + THE1C LTR MaLR 5 375 0 2016 171 28 14 chr2 54250761 54251183 -196436671 + L1MA8 LINE L1 5864 6291 0 316 313 43 9 chr2 54251259 54251374 -196436480 + HAL1b LINE L1 673 791 -557 288 289 97 0 chr2 54251380 54251494 -196436360 + HAL1b LINE L1 747 871 -477 1973 192 31 30 chr2 54251683 54252238 -196435616 - MLT2A2 LTR ERVL 0 554 1 10995 112 11 3 chr2 54252238 54253793 -196434061 - HERVL-A2 LTR ERVL 0 5654 4088 2342 119 0 20 chr2 54253795 54254149 -196433705 + THE1C LTR MaLR 29 375 0 588 256 82 39 chr2 54254201 54254540 -196433314 - MSTD LTR MaLR -12 384 1 26 0 0 0 chr2 54254707 54254733 -196433121 + AT_rich Low_complexity Low_complexity 1 26 0 1094 170 36 0 chr2 54255287 54255511 -196432343 - L1MA7 LINE L1 -4 6287 6056 3407 169 19 5 chr2 54255515 54256158 -196431696 - L1MA7 LINE L1 -368 5923 5272 2227 127 37 8 chr2 54256199 54256553 -196431301 - THE1B LTR MaLR 0 364 1 2084 148 12 9 chr2 54256784 54257122 -196430732 - THE1B LTR MaLR -25 339 1 7471 154 55 30 chr2 54257122 54258664 -196429190 - THE1B-int LTR MaLR 0 1580 1 2159 170 3 3 chr2 54258664 54259028 -196428826 - THE1B LTR MaLR 0 364 1 215 302 0 0 chr2 54259695 54259748 -196428106 - L2 LINE L2 -2 3270 3218 1423 274 54 87 chr2 54259965 54260739 -196427115 - LTR41 LTR ERVL -22 751 3 520 298 82 12 chr2 54260787 54261032 -196426822 - MLT1J LTR MaLR -249 262 1 503 330 139 59 chr2 54261576 54262048 -196425806 - L2 LINE L2 -22 3291 2782 24 0 0 0 chr2 54262351 54262375 -196425479 + AT_rich Low_complexity Low_complexity 1 24 0 235 317 24 12 chr2 54263455 54263537 -196424317 + L2 LINE L2 3186 3268 -4 444 77 0 0 chr2 54263746 54263811 -196424043 + (GA)n Simple_repeat Simple_repeat 1 65 0 233 237 40 0 chr2 54263896 54263972 -196423882 - L1MC4 LINE L1 -1344 6698 6620 496 307 94 44 chr2 54265434 54265796 -196422058 + LTR16A1 LTR ERVL 48 427 -30 2074 98 0 7 chr2 54266811 54267088 -196420766 + AluSp SINE Alu 23 297 -16 241 333 0 31 chr2 54267836 54267932 -196419922 + MIR SINE MIR 69 144 -64 430 308 17 32 chr2 54267936 54268125 -196419729 - MIR SINE MIR -66 196 16 209 361 0 0 chr2 54268129 54268190 -196419664 + L3b LINE CR1 1519 1579 -4 24 77 0 0 chr2 54269170 54269222 -196418632 + AT_rich Low_complexity Low_complexity 1 52 0 387 0 0 0 chr2 54269473 54269516 -196418338 + (CA)n Simple_repeat Simple_repeat 2 44 0 1995 99 28 7 chr2 54271176 54271460 -196416394 + AluSc SINE Alu 1 290 -19 193 157 0 71 chr2 54271559 54271629 -196416225 + (TATG)n Simple_repeat Simple_repeat 4 68 0 809 288 131 53 chr2 54271631 54272178 -196415676 - L2 LINE L2 -19 3294 2696 2119 114 3 10 chr2 54272178 54272477 -196415377 - AluSg SINE Alu -13 297 1 809 288 131 53 chr2 54272477 54272577 -196415277 - L2 LINE L2 -617 2696 2605 204 40 0 0 chr2 54272669 54272694 -196415160 + (T)n Simple_repeat Simple_repeat 1 25 0 504 231 120 23 chr2 54273618 54273834 -196414020 + L1ME2 LINE L1 4981 5217 -929 740 234 23 7 chr2 54274063 54274435 -196413419 + L1ME2 LINE L1 5301 5738 -428 483 315 37 51 chr2 54274435 54274730 -196413124 + LTR41 LTR ERVL 1 291 -482 712 214 73 76 chr2 54274941 54275259 -196412595 + LTR41 LTR ERVL 459 523 0 353 264 30 42 chr2 54275259 54275426 -196412428 + L1ME2 LINE L1 5737 5901 -263 595 207 33 7 chr2 54325428 54325578 -196362276 + L1MB3 LINE L1 6029 6182 -1 712 272 18 0 chr2 54325634 54325803 -196362051 - MER5A DNA MER1_type 0 189 18 510 133 8 39 chr2 54326266 54326394 -196361460 + (TA)n Simple_repeat Simple_repeat 1 124 0 2799 192 52 36 chr2 54326654 54327351 -196360503 + L1MC2 LINE L1 5617 6324 -20 42 57 0 0 chr2 54327650 54327720 -196360134 + AT_rich Low_complexity Low_complexity 1 70 0 285 109 47 0 chr2 54327730 54327794 -196360060 + (TA)n Simple_repeat Simple_repeat 1 67 0 2766 3 3 3 chr2 54328103 54328413 -196359441 + AluYa5 SINE Alu 1 310 -1 710 205 21 26 chr2 54329068 54329258 -196358596 + MER53 DNA DNA 1 189 0 640 264 66 0 chr2 54330930 54331112 -196356742 + MIR SINE MIR 58 251 -11 302 163 0 0 chr2 54331118 54331167 -196356687 + U5 snRNA snRNA 3 51 -65 408 130 0 0 chr2 54331281 54331350 -196356504 + (GA)n Simple_repeat Simple_repeat 2 70 0 705 290 43 9 chr2 54331594 54331825 -196356029 - L1ME1 LINE L1 -4 6231 5993 5444 148 33 13 chr2 54331855 54332057 -196355797 - L1MA2 LINE L1 -1 6302 6105 2129 102 0 0 chr2 54332057 54332340 -196355514 - AluSq SINE Alu -19 294 12 5444 148 33 13 chr2 54332340 54333599 -196354255 - L1MA2 LINE L1 -198 6105 4868 1736 253 67 19 chr2 54333601 54334167 -196353687 - L1ME1 LINE L1 -235 6000 5408 845 299 102 21 chr2 54336168 54336696 -196351158 - L1ME1 LINE L1 -4536 1860 1290 254 210 40 10 chr2 54336768 54336868 -196350986 + (TA)n Simple_repeat Simple_repeat 2 104 0 924 284 55 41 chr2 54336964 54337524 -196350330 - L1ME1 LINE L1 -5216 1180 613 327 374 55 14 chr2 54337521 54337740 -196350114 - L1ME1 LINE L1 -5991 405 178 * 669 45 0 0 chr2 54338070 54338159 -196349695 + (TA)n Simple_repeat Simple_repeat 2 90 0 21 71 0 0 chr2 54338225 54338267 -196349587 + AT_rich Low_complexity Low_complexity 1 42 0 832 216 0 37 chr2 54338318 54338508 -196349346 + FRAM SINE Alu 1 176 0 277 122 28 47 chr2 54338722 54338829 -196349025 + (TA)n Simple_repeat Simple_repeat 2 106 0 311 301 177 48 chr2 54340572 54340928 -196346926 + L1MC4a LINE L1 4599 5000 -1146 625 338 105 11 chr2 54341258 54341781 -196346073 + L1MC4a LINE L1 5465 6036 -1772 24 32 0 0 chr2 54341857 54341888 -196345966 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr2 54342157 54342187 -196345667 + AT_rich Low_complexity Low_complexity 1 30 0 2143 58 0 4 chr2 54342197 54342474 -196345380 + AluY SINE Alu 35 310 -1 2108 88 0 0 chr2 54343360 54343634 -196344220 - AluY SINE Alu -37 274 1 283 277 54 68 chr2 54344382 54344530 -196343324 + L2 LINE L2 3159 3304 -9 485 316 68 29 chr2 54345019 54345225 -196342629 - MIR SINE MIR -42 220 7 270 143 0 0 chr2 54346076 54346125 -196341729 + (TA)n Simple_repeat Simple_repeat 1 49 0 2241 119 30 19 chr2 54346276 54346647 -196341207 + THE1C LTR MaLR 1 375 0 349 311 116 18 chr2 54346647 54346872 -196340982 - L1MC/D LINE L1 -2013 5795 5549 21 0 0 0 chr2 54346942 54346963 -196340891 + AT_rich Low_complexity Low_complexity 1 21 0 318 217 40 91 chr2 54347004 54347179 -196340675 - HAL1 LINE L1 -97 2410 2245 201 175 0 0 chr2 54347768 54347808 -196340046 + (TG)n Simple_repeat Simple_repeat 1 40 0 591 272 122 8 chr2 54347902 54348156 -196339698 - L1ME3 LINE L1 -89 6073 5791 547 214 96 39 chr2 54348173 54348351 -196339503 - AluJo SINE Alu -10 302 115 928 266 124 19 chr2 54348354 54348829 -196339025 - L1ME3 LINE L1 -393 5769 5345 1269 233 79 22 chr2 54348829 54349198 -196338656 - MLT1B LTR MaLR 0 390 1 928 266 124 19 chr2 54349198 54349552 -196338302 - L1ME3 LINE L1 -817 5345 4850 27 29 0 0 chr2 54349582 54349616 -196338238 + AT_rich Low_complexity Low_complexity 1 34 0 345 288 7 14 chr2 54350045 54350184 -196337670 - HAL1 LINE L1 -856 1651 1514 343 284 92 52 chr2 54350346 54350575 -196337279 - HAL1 LINE L1 -1158 1349 1112 184 258 194 0 chr2 54350707 54350769 -196337085 + MIR SINE MIR 183 256 -6 1928 129 4 4 chr2 54351847 54352161 -196335693 + AluSg SINE Alu 1 314 0 182 394 24 35 chr2 54352566 54352736 -196335118 + L3 LINE CR1 31 198 -1379 2450 99 8 8 chr2 54353677 54354032 -196333822 - THE1A LTR MaLR 0 355 1 4324 134 17 1 chr2 54354032 54354695 -196333159 - THE1A-int LTR MaLR 0 1580 908 2000 16 23 4 chr2 54354802 54355059 -196332795 - AluYa5 SINE Alu -49 262 1 2367 125 19 11 chr2 54355647 54356008 -196331846 + THE1B LTR MaLR 1 364 0 6546 94 5 20 chr2 54356141 54357068 -196330786 - THE1A-int LTR MaLR -666 914 2 2449 113 6 0 chr2 54357069 54357422 -196330432 - THE1A LTR MaLR 0 355 1 329 355 51 82 chr2 54358707 54359062 -196328792 + L2 LINE L2 2929 3272 0 305 298 70 23 chr2 54359200 54359371 -196328483 + L1ME4a LINE L1 5713 5891 -230 1796 167 37 17 chr2 54360883 54361236 -196326618 + MER46B DNA MER2_type 2 236 0 672 114 38 13 chr2 54361895 54362053 -196325801 + (TAGA)n Simple_repeat Simple_repeat 1 162 0 5878 40 14 1 chr2 54363323 54364044 -196323810 - L1PA6 LINE L1 -5 6149 5420 1839 64 0 0 chr2 54364045 54364328 -196323526 + L1P LINE L1 5144 5426 -728 359 338 27 77 chr2 54364654 54364876 -196322978 + L2 LINE L2 29 239 -3075 * 524 304 36 36 chr2 54364846 54364925 -196322929 + L2 LINE L2 3075 3153 -160 2143 123 0 0 chr2 54364925 54365226 -196322628 - AluSx SINE Alu -11 301 1 524 304 36 36 chr2 54365226 54365370 -196322484 + L2 LINE L2 3152 3298 -15 35 24 0 0 chr2 54365451 54365493 -196322361 + AT_rich Low_complexity Low_complexity 1 42 0 6203 102 14 28 chr2 54365521 54366658 -196321196 - L1PA14 LINE L1 -1 6160 5036 2156 94 3 3 chr2 54366658 54366966 -196320888 - AluY SINE Alu -3 308 1 6203 102 14 28 chr2 54366966 54367365 -196320489 - L1PA14 LINE L1 -1125 5036 4633 454 258 164 31 chr2 54367783 54367942 -196319912 - MER5A DNA MER1_type -1 188 9 405 0 0 0 chr2 54369283 54369328 -196318526 + (TG)n Simple_repeat Simple_repeat 2 46 0 222 118 0 0 chr2 54370568 54370602 -196317252 + (GA)n Simple_repeat Simple_repeat 1 34 0 264 59 0 0 chr2 54371564 54371598 -196316256 + (TG)n Simple_repeat Simple_repeat 1 34 0 399 262 96 80 chr2 54371711 54371898 -196315956 - MIR SINE MIR -28 234 45 236 370 141 0 chr2 54372178 54372362 -196315492 - MIR SINE MIR -14 248 39 201 39 0 0 chr2 54373340 54373366 -196314488 + (TTG)n Simple_repeat Simple_repeat 2 27 0 184 337 116 0 chr2 54373639 54373725 -196314129 + MIR SINE MIR 30 125 -83 210 143 0 0 chr2 54373728 54373763 -196314091 + (TC)n Simple_repeat Simple_repeat 2 36 0 219 139 0 0 chr2 54373853 54373889 -196313965 + (TATG)n Simple_repeat Simple_repeat 3 38 0 227 281 118 44 chr2 54374012 54374147 -196313707 + MIR SINE MIR 72 216 -46 21 0 0 0 chr2 54374432 54374453 -196313401 + AT_rich Low_complexity Low_complexity 1 21 0 367 374 32 14 chr2 54374641 54374860 -196312994 + MIR SINE MIR 32 254 -8 893 216 6 0 chr2 54375172 54375343 -196312511 - FAM SINE Alu -3 172 1 186 43 0 0 chr2 54375625 54375648 -196312206 + (TATAA)n Simple_repeat Simple_repeat 4 26 0 874 241 51 31 chr2 54375839 54376133 -196311721 + MER46C DNA MER2_type 24 323 -15 356 298 111 45 chr2 54376985 54377317 -196310537 + L1ME4a LINE L1 5746 6099 -22 1596 243 45 35 chr2 54377426 54377940 -196309914 - LTR40a LTR ERVL 0 519 1 343 323 0 0 chr2 54378090 54378189 -196309665 - L1ME3A LINE L1 -310 5860 5762 2086 197 104 41 chr2 54378190 54378779 -196309075 + MER51A LTR ERV1 1 626 -8 259 278 11 0 chr2 54379132 54379222 -196308632 - L1ME3A LINE L1 -865 5281 5191 742 303 88 32 chr2 54379528 54380333 -196307521 - L1ME3A LINE L1 -1299 4847 3998 391 284 28 50 chr2 54380377 54380518 -196307336 + L2 LINE L2 3159 3296 -17 272 302 8 16 chr2 54380550 54380679 -196307175 - L1ME3A LINE L1 -2206 3940 3813 244 98 0 0 chr2 54381086 54381127 -196306727 - AluSc SINE Alu -3 296 256 1549 87 0 0 chr2 54381128 54381323 -196306531 - AluSc SINE Alu -114 195 1 329 302 47 0 chr2 54383127 54383233 -196304621 + MER117 DNA MER1_type 51 161 -36 194 277 0 84 chr2 54383658 54383741 -196304113 - MIR SINE MIR -74 188 113 562 319 5 34 chr2 54383845 54384049 -196303805 - MIR SINE MIR -4 258 61 2174 167 29 52 chr2 54384423 54384629 -196303225 + MSTB1 LTR MaLR 1 210 -222 1809 132 29 0 chr2 54384629 54384901 -196302953 + AluSx SINE Alu 1 280 -32 2174 167 29 52 chr2 54384901 54385136 -196302718 + MSTB1 LTR MaLR 210 432 0 201 327 138 19 chr2 54387322 54387481 -196300373 + L2 LINE L2 3123 3300 -13 28 29 0 0 chr2 54387549 54387584 -196300270 + AT_rich Low_complexity Low_complexity 1 35 0 263 325 68 26 chr2 54387819 54387936 -196299918 - MIR3 SINE MIR -12 196 75 213 369 128 7 chr2 54388551 54388838 -196299016 - L2 LINE L2 -214 3058 2734 1415 262 64 19 chr2 54389597 54390647 -196297207 - L1MD3 LINE L1 -1 7994 6725 619 153 161 24 chr2 54390647 54390771 -196297083 + MER2 DNA MER2_type 205 345 0 1159 240 97 37 chr2 54390771 54391425 -196296429 - L1MC4a LINE L1 -1203 6605 5928 360 396 51 21 chr2 54392417 54392750 -196295104 + L1ME3A LINE L1 5595 5937 -233 22 56 0 0 chr2 54394442 54394478 -196293376 + AT_rich Low_complexity Low_complexity 1 36 0 2109 190 69 0 chr2 54394823 54395260 -196292594 + MLT1C LTR MaLR 1 467 0 5380 137 25 27 chr2 54395473 54396434 -196291420 - L1MA5A LINE L1 -22 6275 5317 534 121 0 129 chr2 54396437 54396561 -196291293 - L1MA4A LINE L1 -462 5841 5734 1736 149 3 44 chr2 54396563 54396878 -196290976 - AluSx SINE Alu 0 312 11 10330 185 25 19 chr2 54396906 54398463 -196289391 - L1P LINE L1 -798 5353 3769 2081 182 41 21 chr2 54398463 54398881 -196288973 + MSTB LTR MaLR 1 426 0 10330 185 25 19 chr2 54398881 54399672 -196288182 - L1P LINE L1 -2382 3769 2984 780 314 38 24 chr2 54399852 54400224 -196287630 - L1ME2 LINE L1 -22 6142 5766 965 288 79 13 chr2 54400244 54400789 -196287065 - L1ME2 LINE L1 -1095 5051 4471 1235 208 20 20 chr2 54400801 54401104 -196286750 - L1MD1 LINE L1 0 6522 6220 25 0 0 0 chr2 54401126 54401151 -196286703 + AT_rich Low_complexity Low_complexity 1 25 0 25 83 0 0 chr2 54401202 54401262 -196286592 + AT_rich Low_complexity Low_complexity 1 60 0 1547 223 70 22 chr2 54401268 54401671 -196286183 - L1MD1 LINE L1 -291 6231 5810 446 274 79 23 chr2 54401666 54401881 -196285973 - L1MD1 LINE L1 -874 5552 5326 * 462 213 115 0 chr2 54401892 54402014 -196285840 - LTR22 LTR ERVK -373 136 1 1764 281 22 9 chr2 54402014 54402791 -196285063 - L1MD1 LINE L1 -1119 5307 4462 1445 230 23 27 chr2 54402900 54403381 -196284473 + MLT2C2 LTR ERVL 1 409 -55 231 180 0 0 chr2 54403405 54403455 -196284399 - L1MD1 LINE L1 -4360 2066 2017 201 237 34 0 chr2 54403456 54403515 -196284339 + (TATATG)n Simple_repeat Simple_repeat 6 66 0 6267 141 39 63 chr2 54403515 54403779 -196284075 + Tigger3b DNA MER2_type 2 271 -2757 1305 147 45 16 chr2 54403779 54404021 -196283833 + L1PA14 LINE L1 5907 6158 -3 6267 141 39 63 chr2 54404021 54405015 -196282839 + Tigger3b DNA MER2_type 271 1229 -2 699 226 7 0 chr2 54405144 54405281 -196282573 - Tigger3(Golem) DNA MER2_type -2888 141 4 235 322 34 27 chr2 54405677 54405823 -196282031 + HAL1 LINE L1 1 147 -2360 5321 84 17 4 chr2 54405921 54406672 -196281182 - MER4E LTR ERV1 0 766 6 404 349 77 0 chr2 54406695 54406930 -196280924 + HAL1 LINE L1 249 501 -2006 317 332 26 80 chr2 54406934 54407160 -196280694 + HAL1 LINE L1 645 858 -1649 422 311 111 8 chr2 54407317 54407552 -196280302 - L1ME3A LINE L1 -68 6102 5844 648 305 55 22 chr2 54407696 54408057 -196279797 - HsTC2a DNA Tc2 -1 741 369 621 305 79 25 chr2 54408064 54408379 -196279475 - HsTC2a DNA Tc2 -411 333 2 235 348 80 27 chr2 54408861 54408973 -196278881 + MIR3 SINE MIR 85 202 -6 256 170 0 0 chr2 54410271 54410324 -196277530 - MER57B LTR ERV1 0 434 382 2068 135 0 3 chr2 54410705 54411008 -196276846 + AluSx SINE Alu 3 304 -8 237 203 40 27 chr2 54411217 54411291 -196276563 + MER106B DNA MER1_type 985 1059 0 212 318 70 23 chr2 54411409 54411538 -196276316 - L2 LINE L2 -50 3263 3129 341 297 70 31 chr2 54411582 54411710 -196276144 - L2 LINE L2 -4 3268 3136 553 298 83 0 chr2 54411718 54411899 -196275955 + MLT1J LTR MaLR 3 198 -313 2141 104 7 3 chr2 54413554 54413853 -196274001 + AluSp SINE Alu 2 301 -12 23 0 0 0 chr2 54413926 54413949 -196273905 + AT_rich Low_complexity Low_complexity 1 23 0 458 349 115 24 chr2 54414317 54414974 -196272880 - L1MC4a LINE L1 -684 5437 5259 25 51 0 0 chr2 54415064 54415103 -196272751 + AT_rich Low_complexity Low_complexity 1 39 0 339 201 113 130 chr2 54415281 54415520 -196272334 - L1ME LINE L1 -5312 893 659 331 394 65 29 chr2 54415775 54416085 -196271769 - L1ME LINE L1 -6034 362 42 716 296 97 80 chr2 54416203 54416917 -196270937 - L1MDa LINE L1 -4535 2005 1280 454 203 117 16 chr2 54417035 54417163 -196270691 + LTR41 LTR ERVL 1 141 -632 321 26 0 0 chr2 54417188 54417226 -196270628 + (TG)n Simple_repeat Simple_repeat 2 39 0 1595 167 4 19 chr2 54417232 54417502 -196270352 - AluSx SINE Alu -46 266 1 236 222 44 44 chr2 54418064 54418154 -196269700 + LTR41 LTR ERVL 675 764 -9 4448 85 46 5 chr2 54418188 54418822 -196269032 + PABL_A LTR ERV1 1 660 0 5652 110 8 15 chr2 54418822 54420419 -196267435 + PABL_A-int LTR ERV1 1 1649 -3366 489 157 152 12 chr2 54420419 54420617 -196267237 - LTR8 LTR ERV1 -434 257 1 6744 115 53 21 chr2 54420619 54421882 -196265972 + PABL_A-int LTR ERV1 2400 3343 -1672 2024 132 0 7 chr2 54421882 54422185 -196265669 + AluSg SINE Alu 1 301 -9 6744 115 53 21 chr2 54422185 54422367 -196265487 + PABL_A-int LTR ERV1 3343 3518 -1497 1001 319 46 17 chr2 54422419 54422829 -196265025 + ERVL LTR ERVL 2386 2807 -2957 1519 315 25 21 chr2 54423273 54423838 -196264016 + ERVL LTR ERVL 3641 4207 -1557 1029 192 5 5 chr2 54423844 54424042 -196263812 - Tigger1 DNA MER2_type -1 2417 2220 815 214 0 3 chr2 54424045 54424274 -196263580 + AluJb SINE Alu 3 296 -16 11004 159 31 24 chr2 54424274 54426279 -196261575 - Tigger1 DNA MER2_type -192 2226 207 913 175 5 83 chr2 54426282 54426499 -196261355 + AluJo SINE Alu 88 287 -25 1017 205 4 34 chr2 54426506 54426740 -196261114 - Tigger1 DNA MER2_type -2191 227 1 782 274 8 28 chr2 54426760 54427008 -196260846 + ERVL LTR ERVL 4182 4424 -1230 1784 152 13 3 chr2 54427306 54427608 -196260246 - AluJb SINE Alu -4 308 4 28 29 0 0 chr2 54427611 54427646 -196260208 + AT_rich Low_complexity Low_complexity 1 35 0 3292 54 0 0 chr2 54427992 54428415 -196259439 + L1PA5 LINE L1 3603 4025 -2121 7105 48 5 0 chr2 54428415 54429964 -196257890 + L1PA5 LINE L1 4599 6151 -3 243 276 23 55 chr2 54430358 54430458 -196257396 - MIR SINE MIR -80 128 31 1100 209 85 56 chr2 54430991 54431569 -196256285 - MER39 LTR ERV1 0 639 1 322 254 34 17 chr2 54431660 54431778 -196256076 + Charlie2 DNA MER1_type 2725 2844 -18 267 265 44 10 chr2 54432261 54432375 -196255479 - L1MC4 LINE L1 -30 8002 5982 321 308 84 40 chr2 54432513 54432740 -196255114 - L1ME3A LINE L1 -202 5968 5732 1130 287 65 8 chr2 54432804 54433187 -196254667 - MER92A LTR ERV1 -5 407 3 273 261 33 22 chr2 54434212 54434304 -196253550 - MER89-int LTR ERV1 -803 3844 3752 2068 189 0 6 chr2 54435444 54435809 -196252045 - MLT1A1 LTR MaLR -2 363 1 2181 110 150 8 chr2 54435852 54436225 -196251629 + MSTA LTR MaLR 1 426 -2 792 287 11 19 chr2 54436321 54436589 -196251265 - MER89-int LTR ERV1 -3923 1013 748 409 329 66 45 chr2 54436879 54437256 -196250598 - MER89-int LTR ERV1 -2957 3844 3460 1804 171 134 15 chr2 54438589 54438999 -196248855 + LOR1b LTR ERV1 1 459 -2 1449 160 179 16 chr2 54439478 54439796 -196248058 - MSTA LTR MaLR 0 428 59 1869 126 0 0 chr2 54439796 54440082 -196247772 - MSTA-int LTR MaLR -1365 286 1 850 127 171 0 chr2 54440082 54440240 -196247614 - MSTA LTR MaLR 0 428 244 1883 95 21 7 chr2 54440240 54440524 -196247330 + AluY SINE Alu 1 288 -23 222 37 0 0 chr2 54440635 54440662 -196247192 + (A)n Simple_repeat Simple_repeat 1 27 0 1017 176 100 25 chr2 54440664 54440903 -196246951 - MSTA LTR MaLR -171 257 1 1379 192 91 50 chr2 54441479 54441875 -196245979 - MER92A LTR ERV1 0 412 1 645 236 25 12 chr2 54441920 54442081 -196245773 - MER58A DNA MER1_type 0 224 62 4934 84 3 1 chr2 54442081 54442739 -196245115 - PABL_A LTR ERV1 0 660 2 12429 74 13 2 chr2 54442740 54444397 -196243457 - PABL_A-int LTR ERV1 0 5015 3341 8902 65 114 98 chr2 54444391 54446055 -196241799 - PABL_A-int LTR ERV1 -2171 2844 1155 * 4329 70 11 32 chr2 54446051 54446676 -196241178 - PABL_A-int LTR ERV1 -4116 899 288 * 1075 82 7 7 chr2 54446676 54446823 -196241031 - PABL_A LTR ERV1 -509 151 5 236 266 31 0 chr2 54446825 54446889 -196240965 - MER58A DNA MER1_type -41 66 1 1331 193 76 92 chr2 54448329 54448764 -196239090 - LTR8A LTR ERV1 -13 714 287 795 210 62 129 chr2 54448810 54449119 -196238735 - LTR8 LTR ERV1 -439 288 1 1302 198 79 7 chr2 54449291 54449645 -196238209 + LTR29 LTR ERV1 1 424 -198 791 156 78 22 chr2 54449630 54449809 -196238045 + LTR49 LTR ERV1 407 595 0 * 21 36 0 0 chr2 54450180 54450208 -196237646 + AT_rich Low_complexity Low_complexity 1 28 0 945 243 92 36 chr2 54450872 54451177 -196236677 + MER2 DNA MER2_type 24 345 0 3065 205 30 14 chr2 54451212 54451911 -196235943 + MER67C LTR ERV1 1 710 0 12256 157 23 64 chr2 54452127 54453326 -196234528 + Tigger1 DNA MER2_type 2 1043 -1375 2159 143 28 6 chr2 54453326 54453682 -196234172 - THE1B LTR MaLR 0 364 1 12256 157 23 64 chr2 54453682 54455004 -196232850 + Tigger1 DNA MER2_type 1043 2418 0 202 295 63 0 chr2 54455062 54455157 -196232697 + MIR SINE MIR 120 220 -42 351 0 20 0 chr2 54455257 54455306 -196232548 + AluY SINE Alu 252 301 0 3101 95 7 0 chr2 54456047 54456478 -196231376 + MER57B LTR ERV1 1 434 0 3869 144 42 16 chr2 54456478 54457124 -196230730 + MER57B-int LTR ERV1 1 663 -6874 * 7739 132 35 41 chr2 54457123 54458479 -196229375 + MER57B-int LTR ERV1 1555 2903 -4634 * 20218 143 32 56 chr2 54458476 54462413 -196225441 + MER57B-int LTR ERV1 3305 7149 -388 352 190 165 0 chr2 54462427 54462506 -196225348 + LTR54B LTR ERV1 15 106 -392 236 182 36 18 chr2 54462740 54462795 -196225059 + LTR54B LTR ERV1 74 129 -369 374 23 0 0 chr2 54462795 54462839 -196225015 + MER57B-int LTR ERV1 7274 7317 -220 613 50 12 0 chr2 54462842 54462922 -196224932 + MER57B-int LTR ERV1 7457 7537 0 2899 104 7 20 chr2 54462922 54463362 -196224492 + MER57B LTR ERV1 1 434 0 23 33 0 0 chr2 54464416 54464446 -196223408 + AT_rich Low_complexity Low_complexity 1 30 0 331 325 16 16 chr2 54464731 54464857 -196222997 - MLT1I LTR MaLR -9 400 275 285 302 63 37 chr2 54464883 54465072 -196222782 - MLT1I LTR MaLR -215 194 1 180 300 0 40 chr2 54465158 54465208 -196222646 + L2 LINE L2 3251 3298 -15 2251 117 0 0 chr2 54465906 54466205 -196221649 + AluSx SINE Alu 1 299 -13 255 333 32 40 chr2 54466382 54466508 -196221346 + MIR3 SINE MIR 6 130 -78 702 288 117 29 chr2 54467333 54467718 -196220136 + L1M3e LINE L1 121 539 -6491 4189 187 58 9 chr2 54467732 54469056 -196218798 + L1M2 LINE L1 4365 5761 -551 427 323 85 30 chr2 54469039 54469422 -196218432 + L1MC4 LINE L1 6430 6917 -971 * 435 272 40 0 chr2 54469497 54469648 -196218206 + L1MC4 LINE L1 6891 7058 -937 301 259 49 25 chr2 54469632 54469713 -196218141 + L1MC4a LINE L1 5759 5841 -1967 * 568 300 31 39 chr2 54469878 54470135 -196217719 + L1MC4a LINE L1 7171 7425 -383 1535 172 62 21 chr2 54470143 54470433 -196217421 + AluJo SINE Alu 3 304 -8 229 213 21 0 chr2 54470433 54470480 -196217374 + L1MD3 LINE L1 7718 7765 -230 4314 197 27 29 chr2 54470569 54471181 -196216673 + L1MA7 LINE L1 5170 5784 -507 396 0 0 0 chr2 54471181 54471225 -196216629 + (TA)n Simple_repeat Simple_repeat 1 44 0 4314 197 27 29 chr2 54471225 54471733 -196216121 + L1MA7 LINE L1 5784 6291 0 494 246 24 9 chr2 54471805 54471949 -196215905 + L1MD3 LINE L1 7435 7735 -228 23 68 0 0 chr2 54471963 54472007 -196215847 + AT_rich Low_complexity Low_complexity 1 44 0 1970 142 0 7 chr2 54472075 54472378 -196215476 - AluSx SINE Alu -7 305 5 900 275 53 32 chr2 54472431 54472904 -196214950 + HAL1 LINE L1 1916 2398 -109 1730 284 92 21 chr2 54473012 54473832 -196214022 - HAL1 LINE L1 -644 1863 986 2339 220 19 14 chr2 54573839 54574827 -196113027 - L1M1 LINE L1 -503 5800 4808 379 214 60 0 chr2 54574940 54575024 -196112830 - FRAM SINE Alu -4 162 74 548 106 24 0 chr2 54575796 54575881 -196111973 - L1PA5 LINE L1 -2 6152 6066 24 96 0 0 chr2 54578806 54578879 -196108975 + AT_rich Low_complexity Low_complexity 1 73 0 382 313 68 61 chr2 54579100 54579275 -196108579 + HAL1 LINE L1 927 1099 -1408 2131 166 121 0 chr2 54579275 54579679 -196108175 - MSTB2 LTR MaLR 0 457 5 382 313 68 61 chr2 54579679 54579915 -196107939 + HAL1 LINE L1 1099 1341 -1166 2214 151 6 3 chr2 54580293 54580657 -196107197 - MER47A DNA MER2_type 0 366 2 1104 127 86 45 chr2 54581049 54581270 -196106584 - MER30 DNA MER1_type 0 230 1 464 241 95 22 chr2 54581306 54581443 -196106411 - MER117 DNA MER1_type -45 152 6 1563 145 47 25 chr2 54582529 54582825 -196105029 + AluJo SINE Alu 3 304 0 1570 233 15 10 chr2 54583300 54583691 -196104163 - L1M1 LINE L1 -2347 3799 3407 362 165 13 0 chr2 54583694 54583773 -196104081 + (TA)n Simple_repeat Simple_repeat 2 81 0 886 294 42 8 chr2 54584053 54584291 -196103563 + MIR SINE MIR 17 262 0 317 260 0 94 chr2 54584778 54584905 -196102949 + L2 LINE L2 3199 3313 0 257 292 19 28 chr2 54585138 54585264 -196102590 - MIR SINE MIR -62 146 27 1558 152 3 73 chr2 54585357 54585659 -196102195 + AluJb SINE Alu 7 287 -25 197 182 0 0 chr2 54586718 54586751 -196101103 - MIR3 SINE MIR -47 161 129 376 244 13 13 chr2 54587116 54587194 -196100660 + MER69 DNA AcHobo 2 79 -1147 584 251 140 0 chr2 54587647 54587826 -196100028 - MER58A DNA MER1_type -14 210 7 779 183 154 82 chr2 54587846 54588152 -196099702 + MER69 DNA AcHobo 2195 2522 -4 842 150 0 0 chr2 54588427 54588554 -196099300 - FLAM_C SINE Alu -6 127 1 373 304 35 64 chr2 54588557 54588728 -196099126 - L3 LINE CR1 -82 1495 1330 283 321 60 0 chr2 54588744 54588828 -196099026 - L2 LINE L2 0 3313 3225 232 274 95 12 chr2 54588931 54589015 -196098839 - L3 LINE CR1 -351 1226 1136 22 0 0 0 chr2 54591408 54591430 -196096424 + AT_rich Low_complexity Low_complexity 1 22 0 308 138 62 15 chr2 54591637 54591702 -196096152 + L2 LINE L2 3200 3267 -5 797 196 19 13 chr2 54592306 54592464 -196095390 - FRAM SINE Alu -21 155 1 687 193 0 15 chr2 54592936 54593071 -196094783 - MER94 DNA DNA 0 134 2 300 285 125 0 chr2 54593097 54593241 -196094613 - MER103 DNA DNA -2 164 3 37 69 0 0 chr2 54593365 54593437 -196094417 + AT_rich Low_complexity Low_complexity 1 72 0 210 368 53 21 chr2 54593546 54593641 -196094213 - L2 LINE L2 -1 3271 3174 204 245 0 19 chr2 54594468 54594521 -196093333 - MIR SINE MIR -192 70 19 277 329 35 0 chr2 54595513 54595598 -196092256 - MIR SINE MIR -102 160 73 2092 123 3 0 chr2 54595790 54596082 -196091772 + AluSq SINE Alu 1 293 -20 959 0 0 0 chr2 54596143 54596248 -196091606 + U6 snRNA snRNA 1 105 -2 180 0 0 0 chr2 54596248 54596268 -196091586 + (A)n Simple_repeat Simple_repeat 1 20 0 340 271 38 42 chr2 54596381 54596592 -196091262 + MIR SINE MIR 1 204 -58 7172 174 14 11 chr2 54597396 54597590 -196090264 - L1PB1 LINE L1 0 6151 5959 2058 99 54 7 chr2 54597590 54597884 -196089970 - AluY SINE Alu -3 308 1 7172 174 14 11 chr2 54597884 54600072 -196087782 - L1PB1 LINE L1 -192 5959 3762 24 0 0 0 chr2 54602389 54602413 -196085441 + AT_rich Low_complexity Low_complexity 1 24 0 3272 130 43 66 chr2 54602630 54603173 -196084681 - MER6A DNA MER2_type -270 595 66 1457 186 35 7 chr2 54603173 54603463 -196084391 + AluJo SINE Alu 1 298 -14 3272 130 43 66 chr2 54603463 54603528 -196084326 - MER6A DNA MER2_type -799 66 1 351 0 0 0 chr2 54604127 54604143 -196083711 + (CA)n Simple_repeat Simple_repeat 1 55 0 351 0 0 0 chr2 54604143 54604182 -196083672 + (CA)n Simple_repeat Simple_repeat 2 40 0 308 191 0 0 chr2 54604981 54605049 -196082805 - HAL1 LINE L1 0 2507 2440 1320 287 63 14 chr2 54605180 54605609 -196082245 - HAL1 LINE L1 -549 1958 1509 28 0 0 0 chr2 54606086 54606114 -196081740 + AT_rich Low_complexity Low_complexity 1 28 0 498 274 138 41 chr2 54606236 54606744 -196081110 - L1M1 LINE L1 -743 5403 4946 2188 98 3 3 chr2 54606744 54607041 -196080813 - AluSc SINE Alu -9 300 4 498 274 138 41 chr2 54607041 54607090 -196080764 - L1M1 LINE L1 -1200 4946 4903 1340 133 50 0 chr2 54607090 54607308 -196080546 - MER30 DNA MER1_type 0 230 2 498 274 138 41 chr2 54607308 54607587 -196080267 - L1M1 LINE L1 -1243 4903 4528 593 204 37 0 chr2 54607718 54607826 -196080028 + Tigger3(Golem) DNA MER2_type 3 114 -2915 2024 246 63 88 chr2 54607826 54609031 -196078823 - L1MEc LINE L1 -4444 1952 778 317 343 70 35 chr2 54609230 54609402 -196078452 - HAL1 LINE L1 -1518 989 812 2111 160 25 52 chr2 54609433 54609909 -196077945 - L1MC2 LINE L1 0 6344 5882 2264 217 30 30 chr2 54609911 54610743 -196077111 - L1MC2 LINE L1 -743 5403 4701 243 88 0 0 chr2 54612196 54612230 -196075624 + (A)n Simple_repeat Simple_repeat 1 34 0 180 0 0 0 chr2 54612497 54612517 -196075337 + (A)n Simple_repeat Simple_repeat 1 20 0 359 235 59 10 chr2 54614552 54614654 -196073200 - MIR SINE MIR -92 170 64 440 202 98 59 chr2 54615293 54615496 -196072358 - L1MC5 LINE L1 -30 7931 7721 888 169 6 6 chr2 54615660 54615832 -196072022 - Charlie1 DNA MER1_type 0 2761 2590 1078 143 14 37 chr2 54615864 54616081 -196071773 - Charlie1 DNA MER1_type -167 2594 2383 1914 242 109 36 chr2 54616084 54616759 -196071095 + L1MC4 LINE L1 7192 7876 -119 387 89 0 0 chr2 54616759 54616815 -196071039 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 1914 242 109 36 chr2 54616815 54616945 -196070909 + L1MC4 LINE L1 7876 7995 0 28 0 0 0 chr2 54617248 54617276 -196070578 + AT_rich Low_complexity Low_complexity 1 28 0 1561 147 62 3 chr2 54617463 54617769 -196070085 - MER33 DNA MER1_type 0 324 1 255 31 0 0 chr2 54617934 54617966 -196069888 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 449 17 17 0 chr2 54618698 54618756 -196069098 + (TCTA)n Simple_repeat Simple_repeat 1 59 0 2271 107 3 0 chr2 54618816 54619126 -196068728 + AluSq SINE Alu 3 313 0 229 167 0 26 chr2 54620024 54620276 -196067578 + AluJo SINE Alu 1 291 -11 252 290 97 32 chr2 54621068 54621254 -196066600 - L2 LINE L2 -4 3309 3112 305 153 0 34 chr2 54621698 54621757 -196066097 - MLT2B1 LTR ERVL 0 520 464 180 176 0 0 chr2 54621801 54621835 -196066019 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 1024 170 99 25 chr2 54621985 54622268 -196065586 - MER33 DNA MER1_type -17 307 4 6723 230 81 44 chr2 54622853 54623667 -196064187 + L1MCa LINE L1 1510 2292 -4134 1347 126 27 5 chr2 54623667 54623889 -196063965 - L1PA15 LINE L1 0 6165 5939 6723 230 81 44 chr2 54623889 54624922 -196062932 + L1MCa LINE L1 2292 3285 -3141 2448 73 0 10 chr2 54624922 54625236 -196062618 + AluY SINE Alu 1 311 0 6723 230 81 44 chr2 54625236 54626451 -196061403 + L1MCa LINE L1 3285 4864 -1562 25 0 0 0 chr2 54627904 54627929 -196059925 + AT_rich Low_complexity Low_complexity 1 25 0 215 157 0 20 chr2 54627944 54627995 -196059859 + (CAT)n Simple_repeat Simple_repeat 3 52 0 763 298 200 41 chr2 54628282 54629145 -196058709 + L2 LINE L2 2279 3309 -4 317 279 0 27 chr2 54629221 54629332 -196058522 - L1MC4 LINE L1 -1333 6709 6602 230 0 33 0 chr2 54629606 54629636 -196058218 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 1371 264 229 32 chr2 54630298 54631182 -196056672 + L2 LINE L2 2199 3235 -78 350 244 141 7 chr2 54631325 54631460 -196056394 - MIR SINE MIR -10 252 100 23 0 0 0 chr2 54631756 54631779 -196056075 + AT_rich Low_complexity Low_complexity 1 23 0 2214 88 3 10 chr2 54631781 54632076 -196055778 - AluSp SINE Alu -20 293 1 21 0 0 0 chr2 54632952 54632973 -196054881 + AT_rich Low_complexity Low_complexity 1 21 0 1238 219 58 27 chr2 54634511 54634840 -196053014 + MER58B DNA MER1_type 2 340 -1 882 229 94 9 chr2 54635153 54635376 -196052478 + L1ME2 LINE L1 5902 6143 -21 24 0 0 0 chr2 54636655 54636679 -196051175 + AT_rich Low_complexity Low_complexity 1 24 0 2704 201 29 20 chr2 54637474 54638031 -196049823 + MER68 LTR ERV1 1 562 0 25 0 0 0 chr2 54638350 54638375 -196049479 + AT_rich Low_complexity Low_complexity 1 25 0 1444 85 32 0 chr2 54638909 54639098 -196048756 + AluSg SINE Alu 1 195 -115 5348 39 21 3 chr2 54639240 54639904 -196047950 + L1PA4 LINE L1 5480 6155 0 4938 152 46 24 chr2 54640081 54640383 -196047471 + L1PBa LINE L1 2359 2653 -4209 1753 151 40 0 chr2 54640383 54640682 -196047172 - AluSq SINE Alu -2 311 1 4938 152 46 24 chr2 54640682 54641830 -196046024 + L1PBa LINE L1 2653 3841 -3021 21 100 0 0 chr2 54641980 54642050 -196045804 + AT_rich Low_complexity Low_complexity 1 70 0 2316 84 0 3 chr2 54642218 54642515 -196045339 - AluSq SINE Alu -17 296 1 1312 167 49 121 chr2 54642674 54643021 -196044833 - MER2 DNA MER2_type -10 335 14 21 0 0 0 chr2 54643035 54643056 -196044798 + AT_rich Low_complexity Low_complexity 1 21 0 699 258 53 2 chr2 54643369 54643578 -196044276 + MIR SINE MIR 6 262 0 1574 288 107 34 chr2 54644921 54645696 -196042158 - L2 LINE L2 -255 3058 2186 272 231 209 0 chr2 54645697 54645788 -196042066 + Charlie2 DNA MER1_type 112 221 -2641 550 280 46 41 chr2 54646192 54646410 -196041444 - MER58A DNA MER1_type -1 223 5 716 175 26 24 chr2 54647443 54647599 -196040255 + MLT1F1 LTR MaLR 420 567 0 351 274 150 30 chr2 54647612 54647846 -196040008 - MIR SINE MIR 0 262 1 697 192 0 0 chr2 54648067 54648192 -196039662 - MER105 DNA DNA -45 159 35 50 18 0 0 chr2 54648440 54648497 -196039357 + AT_rich Low_complexity Low_complexity 1 57 0 192 40 0 0 chr2 54649441 54649466 -196038388 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 771 226 81 16 chr2 54650545 54650793 -196037061 + L1MC4 LINE L1 7769 8032 -10 24 32 0 0 chr2 54651248 54651279 -196036575 + AT_rich Low_complexity Low_complexity 1 31 0 595 179 26 34 chr2 54651318 54651435 -196036419 - FRAM SINE Alu -12 164 49 797 168 47 175 chr2 54651640 54651914 -196035940 - MER8 DNA MER2_type 0 239 1 242 247 39 52 chr2 54652503 54652580 -196035274 - L2 LINE L2 -4 3309 3234 1602 189 7 17 chr2 54654030 54654331 -196033523 + AluJo SINE Alu 1 298 -14 1887 164 13 10 chr2 54655288 54655598 -196032256 - AluJo SINE Alu -1 311 1 440 323 108 62 chr2 54655656 54656268 -196031586 - L2 LINE L2 -6 3266 2566 1658 172 0 61 chr2 54656409 54656735 -196031119 + AluJo SINE Alu 3 308 -4 279 291 23 12 chr2 54656762 54656848 -196031006 + L2 LINE L2 3186 3272 0 1462 167 71 108 chr2 54658475 54658882 -196028972 - MLT2B1 LTR ERVL 0 520 129 392 303 6 28 chr2 54659637 54659815 -196028039 + MER5B DNA MER1_type 1 174 -4 374 225 83 67 chr2 54660018 54660138 -196027716 - MIR SINE MIR -56 206 85 275 226 172 11 chr2 54661218 54661311 -196026543 + MIR SINE MIR 30 137 -71 27 62 0 0 chr2 54662525 54662573 -196025281 + GC_rich Low_complexity Low_complexity 1 48 0 21 36 0 0 chr2 54663205 54663233 -196024621 + GC_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 54664159 54664186 -196023668 + AT_rich Low_complexity Low_complexity 1 27 0 336 230 103 45 chr2 54664566 54664678 -196023176 + MIR SINE MIR 34 150 -64 1506 96 54 4 chr2 54664738 54664977 -196022877 + L1MA5A LINE L1 6035 6285 -12 1380 143 56 26 chr2 54665562 54665793 -196022061 + AluSq SINE Alu 1 238 -75 466 203 340 13 chr2 54665992 54666145 -196021709 - MER3 DNA MER1_type 0 209 7 1803 130 60 7 chr2 54666454 54666739 -196021115 + AluSx SINE Alu 1 300 -12 517 267 178 27 chr2 54666871 54667096 -196020758 + MIR SINE MIR 3 261 -1 461 304 96 17 chr2 54669482 54669712 -196018142 - MIR SINE MIR 0 262 15 1421 224 40 57 chr2 54670061 54670504 -196017350 + L1ME LINE L1 4780 5196 -968 1973 132 11 4 chr2 54670504 54670806 -196017048 + AluSx SINE Alu 1 304 0 1421 224 40 57 chr2 54670806 54671226 -196016628 + L1ME LINE L1 5196 5622 -542 3428 162 36 5 chr2 54671348 54672160 -196015694 - L1MC1 LINE L1 -498 5835 5006 198 0 0 0 chr2 54672173 54672195 -196015659 + (TTG)n Simple_repeat Simple_repeat 3 24 0 2196 104 0 0 chr2 54672197 54672477 -196015377 - AluSg SINE Alu -30 280 1 198 103 0 0 chr2 54672586 54672615 -196015239 + (TATG)n Simple_repeat Simple_repeat 2 30 0 224 358 39 45 chr2 54675940 54676119 -196011735 + L3 LINE CR1 1385 1562 -15 521 328 42 21 chr2 54676430 54676671 -196011183 - L3 LINE CR1 -111 1466 1221 191 284 128 37 chr2 54676755 54676864 -196010990 - L2 LINE L2 0 3313 3195 21 36 0 0 chr2 54676945 54676973 -196010881 + AT_rich Low_complexity Low_complexity 1 28 0 186 366 32 36 chr2 54677615 54677836 -196010018 + L2 LINE L2 2448 2667 -647 2261 84 3 0 chr2 54677839 54678123 -196009731 - AluSx SINE Alu -3 309 25 2017 128 4 0 chr2 54678209 54678514 -196009340 - AluSx SINE Alu 0 306 1 298 326 104 35 chr2 54678886 54679030 -196008824 + L2 LINE L2 3115 3268 -4 1496 157 25 31 chr2 54679146 54679465 -196008389 - L1MA8 LINE L1 -6 6285 5969 1124 135 0 0 chr2 54679568 54679724 -196008130 + AluSp SINE Alu 144 299 -14 5811 187 28 26 chr2 54679745 54681800 -196006054 - L1MB1 LINE L1 -33 6156 4095 1066 216 0 28 chr2 54681801 54682014 -196005840 + AluJo SINE Alu 1 207 -105 22 70 0 0 chr2 54682259 54682302 -196005552 + AT_rich Low_complexity Low_complexity 1 43 0 1945 226 141 5 chr2 54682449 54683025 -196004829 - L2 LINE L2 -674 2640 1987 27 62 0 0 chr2 54683526 54683574 -196004280 + AT_rich Low_complexity Low_complexity 1 48 0 234 308 44 0 chr2 54683923 54684014 -196003840 + L1ME LINE L1 5751 5845 -321 324 0 0 0 chr2 54684125 54684161 -196003693 + (CA)n Simple_repeat Simple_repeat 2 37 0 264 266 219 16 chr2 54685202 54685330 -196002524 - L2 LINE L2 0 3313 3160 1118 196 20 0 chr2 54685331 54685535 -196002319 + AluJo SINE Alu 82 289 -23 492 298 0 0 chr2 54686591 54686722 -196001132 + MER94 DNA DNA 1 131 -3 23 33 0 0 chr2 54687058 54687088 -196000766 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr2 54687352 54687379 -196000475 + AT_rich Low_complexity Low_complexity 1 27 0 538 185 109 34 chr2 54687960 54688079 -195999775 + FLAM_A SINE Alu 4 131 -2 35 41 0 0 chr2 54688079 54688128 -195999726 + AT_rich Low_complexity Low_complexity 1 49 0 200 388 115 16 chr2 54688609 54688792 -195999062 + L2 LINE L2 2916 3116 -156 327 294 71 6 chr2 54690021 54690191 -195997663 - L1M4 LINE L1 -1801 4345 4165 305 296 144 26 chr2 54690350 54690620 -195997234 + L1MEc LINE L1 2020 2321 -4075 1011 150 6 0 chr2 54690663 54690823 -195997031 + AluSq SINE Alu 137 297 -16 673 233 0 6 chr2 54690836 54690999 -195996855 + L1M4 LINE L1 4643 4804 -1342 2156 108 3 29 chr2 54691260 54691566 -195996288 - AluSp SINE Alu -15 298 1 1937 120 0 22 chr2 54692247 54692523 -195995331 - AluSx SINE Alu -10 302 33 1525 197 0 21 chr2 54692547 54692729 -195995125 - AluJo SINE Alu -14 298 123 216 0 0 0 chr2 54692729 54692753 -195995101 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1525 197 0 21 chr2 54692753 54692859 -195994995 - AluJo SINE Alu -189 123 16 180 111 0 0 chr2 54693171 54693198 -195994656 + (CA)n Simple_repeat Simple_repeat 2 28 0 342 0 0 0 chr2 54693218 54693256 -195994598 + (TG)n Simple_repeat Simple_repeat 2 39 0 1901 180 31 6 chr2 54693463 54693818 -195994036 - MLT1A1 LTR MaLR -1 364 1 536 348 118 13 chr2 54693858 54694171 -195993683 + L2 LINE L2 78 423 -2891 1945 150 0 10 chr2 54694175 54694489 -195993365 - AluJb SINE Alu 0 312 2 247 103 51 0 chr2 54694508 54694547 -195993307 - L1MB3 LINE L1 -74 6109 6069 2449 124 19 5 chr2 54695401 54695771 -195992083 + THE1C LTR MaLR 1 375 0 9928 113 29 45 chr2 54695771 54697376 -195990478 + THE1C-int LTR MaLR 1 1580 0 2468 107 30 3 chr2 54697376 54697741 -195990113 + THE1C LTR MaLR 1 375 0 376 274 190 0 chr2 54698334 54698513 -195989341 - MIR SINE MIR -10 252 40 2191 152 5 39 chr2 54698518 54698932 -195988922 + L1MB8 LINE L1 5603 6002 -176 191 265 41 0 chr2 54698949 54698998 -195988856 - MIR SINE MIR -208 54 4 635 220 220 5 chr2 54700861 54701070 -195986784 - L2 LINE L2 -455 2859 2606 73 12 0 0 chr2 54701385 54701465 -195986389 + AT_rich Low_complexity Low_complexity 1 80 0 567 133 0 0 chr2 54701482 54701565 -195986289 + AluS SINE Alu 5 87 -226 207 378 95 20 chr2 54702373 54702521 -195985333 + L2 LINE L2 3112 3270 -2 728 174 71 4 chr2 54703072 54703217 -195984637 + MER5A DNA MER1_type 1 164 -19 460 345 47 11 chr2 54703435 54703626 -195984228 + MIR3 SINE MIR 1 198 -10 436 330 67 25 chr2 54704457 54704906 -195982948 - MERVL LTR ERVL -2287 3198 2731 240 250 13 13 chr2 54704988 54705064 -195982790 + LTR67 LTR ERVL 461 536 -21 1124 178 51 19 chr2 54705311 54705525 -195982329 + MER58A DNA MER1_type 4 224 0 1687 225 133 34 chr2 54705781 54706600 -195981254 + Charlie7 DNA MER1_type 1498 2397 -215 861 184 74 68 chr2 54706699 54706858 -195980996 - L1M4 LINE L1 -2136 4010 3847 2059 52 4 8 chr2 54706858 54707125 -195980729 - L1PA7 LINE L1 -2 6152 5887 861 184 74 68 chr2 54707125 54707274 -195980580 - L1M4 LINE L1 -2299 3847 3700 221 327 86 59 chr2 54707704 54708043 -195979811 + L2 LINE L2 1525 1872 -1442 2302 94 0 0 chr2 54708327 54708625 -195979229 - AluY SINE Alu -11 300 3 261 321 235 25 chr2 54708678 54708874 -195978980 - MIR SINE MIR -15 247 11 7130 109 94 48 chr2 54709349 54710836 -195977018 - pTR5 LTR ERV1 -143 2295 175 239 268 75 117 chr2 54710836 54711092 -195976762 + L2 LINE L2 2763 2968 -304 1535 178 45 3 chr2 54711092 54711378 -195976476 - AluJo SINE Alu -14 298 1 239 268 75 117 chr2 54711378 54711669 -195976185 + L2 LINE L2 2968 3270 -2 22 0 0 0 chr2 54712207 54712229 -195975625 + AT_rich Low_complexity Low_complexity 1 22 0 589 284 94 94 chr2 54714048 54714558 -195973296 - MLT1K LTR MaLR -69 519 10 895 147 26 37 chr2 54714575 54714766 -195973088 + MER53 DNA DNA 1 189 0 23 0 0 0 chr2 54714783 54714806 -195973048 + AT_rich Low_complexity Low_complexity 1 23 0 1136 231 18 39 chr2 54815658 54815940 -195871914 + MLT1A1 LTR MaLR 84 359 -6 28 79 0 0 chr2 54816537 54816600 -195871254 + AT_rich Low_complexity Low_complexity 1 63 0 1716 110 8 0 chr2 54816712 54816949 -195870905 - AluSq SINE Alu -74 239 1 216 0 0 0 chr2 54816953 54816977 -195870877 + (TA)n Simple_repeat Simple_repeat 2 25 0 34 55 0 0 chr2 54817311 54817366 -195870488 + AT_rich Low_complexity Low_complexity 1 55 0 29 0 0 0 chr2 54817502 54817531 -195870323 + AT_rich Low_complexity Low_complexity 1 29 0 2153 189 13 15 chr2 54817631 54818028 -195869826 + MSTD LTR MaLR 1 396 0 468 219 46 13 chr2 54818674 54818825 -195869029 + L1MA6 LINE L1 6145 6300 0 * 2735 193 61 39 chr2 54818823 54818966 -195868888 - L1MB8 LINE L1 -140 6038 5900 2045 88 4 0 chr2 54818966 54819226 -195868628 - AluSc SINE Alu -13 296 36 2735 193 61 39 chr2 54819226 54819756 -195868098 - L1MB8 LINE L1 -278 5900 5350 183 322 22 33 chr2 54819756 54819846 -195868008 + L2 LINE L2 2996 3084 -188 2256 101 0 0 chr2 54820970 54821276 -195866578 - AluSq SINE Alu -7 306 1 287 281 42 10 chr2 54821715 54821811 -195866043 + MIR3 SINE MIR 100 198 -10 197 333 50 0 chr2 54822052 54822112 -195865742 - MIR SINE MIR -164 98 36 560 224 109 6 chr2 54822299 54822464 -195865390 - MER39 LTR ERV1 0 707 526 3749 143 11 20 chr2 54822472 54822820 -195865034 + MER41B LTR ERV1 1 342 -293 1920 143 40 15 chr2 54822820 54823148 -195864706 + MER1B DNA MER1_type 1 336 -1 3749 143 11 20 chr2 54823148 54823440 -195864414 + MER41B LTR ERV1 342 635 0 647 231 191 36 chr2 54823440 54823754 -195864100 - MER39 LTR ERV1 -206 501 4 2397 179 54 103 chr2 54824930 54825657 -195862197 + LTR8 LTR ERV1 1 691 0 24 53 0 0 chr2 54825668 54825706 -195862148 + AT_rich Low_complexity Low_complexity 1 38 0 2584 80 128 2 chr2 54825853 54826251 -195861603 + LTR7 LTR ERV1 1 448 -2 228 308 44 11 chr2 54826303 54826394 -195861460 + MIR3 SINE MIR 89 182 -26 180 0 0 0 chr2 54826820 54826840 -195861014 + (A)n Simple_repeat Simple_repeat 1 20 0 1152 235 132 31 chr2 54827355 54827802 -195860052 + Charlie4a DNA MER1_type 17 508 0 22 0 0 0 chr2 54829148 54829170 -195858684 + AT_rich Low_complexity Low_complexity 1 22 0 2549 123 5 0 chr2 54830306 54830679 -195857175 + THE1C LTR MaLR 1 375 0 9028 123 35 53 chr2 54830679 54832214 -195855640 + THE1C-int LTR MaLR 1 1507 -73 2289 209 17 27 chr2 54832383 54832922 -195854932 - LTR27 LTR ERV1 -132 504 3 621 77 0 11 chr2 54832922 54833013 -195854841 + THE1C-int LTR MaLR 1491 1580 0 2546 114 3 16 chr2 54833013 54833391 -195854463 + THE1C LTR MaLR 1 373 -2 1267 188 34 55 chr2 54833425 54833718 -195854136 - AluJb SINE Alu -25 287 1 26 0 0 0 chr2 54833787 54833813 -195854041 + AT_rich Low_complexity Low_complexity 1 26 0 297 350 104 35 chr2 54833961 54834250 -195853604 + L2 LINE L2 3005 3313 0 422 243 75 14 chr2 54834415 54834578 -195853276 - L1M LINE L1 -743 5403 5237 239 113 99 0 chr2 54834578 54834649 -195853205 + (TA)n Simple_repeat Simple_repeat 1 78 0 1401 244 30 16 chr2 54834659 54835085 -195852769 - L1MCc LINE L1 -918 6023 5592 618 260 222 36 chr2 54835071 54835567 -195852287 - L1MCc LINE L1 -2064 4877 4290 * 1233 276 108 3 chr2 54835597 54836282 -195851572 - L1MCc LINE L1 -2739 4202 3446 446 304 58 36 chr2 54836293 54836581 -195851273 - L1MCc LINE L1 -4895 1528 1301 2885 109 39 11 chr2 54836581 54837022 -195850832 + MLT2A2 LTR ERVL 1 453 0 446 304 58 36 chr2 54837022 54837161 -195850693 - L1MCc LINE L1 -5122 1301 1167 456 62 0 0 chr2 54837318 54837382 -195850472 + (TC)n Simple_repeat Simple_repeat 1 64 0 834 193 28 4 chr2 54838072 54838267 -195849587 - L1MA4A LINE L1 -155 6148 5937 522 103 13 0 chr2 54838274 54838352 -195849502 - L1PA10 LINE L1 -5 6163 6085 22 0 0 0 chr2 54838689 54838711 -195849143 + AT_rich Low_complexity Low_complexity 1 22 0 224 356 0 59 chr2 54838809 54838927 -195848927 + L2 LINE L2 2946 3056 -216 1781 174 17 0 chr2 54839112 54839405 -195848449 - AluJb SINE Alu -14 298 1 21 0 0 0 chr2 54840119 54840140 -195847714 + AT_rich Low_complexity Low_complexity 1 21 0 1443 331 163 18 chr2 54840755 54841652 -195846202 + L2 LINE L2 2119 3127 -186 420 311 26 38 chr2 54841665 54841929 -195845925 + L2 LINE L2 3050 3310 -3 191 265 59 69 chr2 54842610 54842712 -195845142 + L2 LINE L2 3204 3304 -9 322 343 76 10 chr2 54842735 54842953 -195844901 - MIR SINE MIR -2 260 31 1988 108 0 47 chr2 54843351 54843684 -195844170 + AluSg SINE Alu 1 319 0 225 0 0 0 chr2 54844220 54844245 -195843609 + (T)n Simple_repeat Simple_repeat 1 25 0 1612 136 3 77 chr2 54844438 54844798 -195843056 - MER4A LTR ERV1 -16 648 257 518 120 65 11 chr2 54844795 54844887 -195842967 - MER4A LTR ERV1 -567 97 1 * 300 175 0 0 chr2 54845274 54845337 -195842517 + (TA)n Simple_repeat Simple_repeat 1 63 0 222 37 0 0 chr2 54845332 54845359 -195842495 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 233 163 20 0 chr2 54845610 54845659 -195842195 + GA-rich Low_complexity Low_complexity 3 52 0 243 88 0 0 chr2 54846386 54846420 -195841434 + (CATA)n Simple_repeat Simple_repeat 3 36 0 203 152 22 0 chr2 54846885 54846931 -195840923 + GA-rich Low_complexity Low_complexity 4 50 0 188 314 58 66 chr2 54847417 54847538 -195840316 - L2 LINE L2 -38 3275 3156 411 337 85 61 chr2 54848049 54848709 -195839145 - L2 LINE L2 -168 3145 2460 681 97 21 0 chr2 54850095 54850188 -195837666 - MER4A LTR ERV1 -1 663 569 716 191 0 0 chr2 54850189 54850315 -195837539 + FRAM SINE Alu 42 167 -9 260 307 84 62 chr2 54850320 54850499 -195837355 + MIR SINE MIR 75 257 -5 378 297 27 34 chr2 54850655 54850803 -195837051 - MER5A DNA MER1_type 0 189 43 330 115 0 0 chr2 54850981 54851033 -195836821 + (CA)n Simple_repeat Simple_repeat 1 52 0 1235 277 82 21 chr2 54852063 54852500 -195835354 + LTR16B LTR ERVL 1 464 0 23 54 0 0 chr2 54852511 54852548 -195835306 + AT_rich Low_complexity Low_complexity 1 37 0 2827 3 0 0 chr2 54852578 54852881 -195834973 + AluYa5 SINE Alu 1 303 -8 205 319 0 103 chr2 54853836 54853952 -195833902 + MER5A DNA MER1_type 81 184 -5 2244 289 145 7 chr2 54854262 54855080 -195832774 + L2 LINE L2 1513 2481 -833 1823 66 0 13 chr2 54855080 54855306 -195832548 - AluSc SINE Alu -11 298 76 2244 289 145 7 chr2 54855306 54855437 -195832417 + L2 LINE L2 2481 2593 -721 2572 14 0 0 chr2 54855547 54855887 -195831967 - AluYa5 SINE Alu 0 340 1 335 296 84 15 chr2 54855900 54856103 -195831751 - L1M4 LINE L1 -1565 4581 4365 245 191 43 35 chr2 54856546 54856661 -195831193 + (TATAA)n Simple_repeat Simple_repeat 5 120 0 1641 248 78 44 chr2 54856697 54857430 -195830424 - L1ME3 LINE L1 -75 6087 5330 283 262 24 12 chr2 54857497 54857581 -195830273 + L2 LINE L2 3221 3305 -8 234 271 14 14 chr2 54857918 54857988 -195829866 - L1P3 LINE L1 -425 5747 5678 2761 87 19 3 chr2 54858005 54858374 -195829480 + THE1C LTR MaLR 1 375 0 10492 109 9 32 chr2 54858376 54859990 -195827864 + THE1C-int LTR MaLR 5 1580 0 2535 139 0 0 chr2 54859990 54860365 -195827489 + THE1C LTR MaLR 1 375 0 253 313 93 0 chr2 54860473 54860623 -195827231 - L1M1 LINE L1 -728 5575 5412 1426 238 60 17 chr2 54860841 54862210 -195825644 - L1MC/D LINE L1 -743 5337 4005 335 214 29 126 chr2 54862223 54862326 -195825528 - LTR8A LTR ERV1 0 727 635 227 321 32 16 chr2 54862351 54862538 -195825316 - L1MC/D LINE L1 -5329 741 552 390 299 97 58 chr2 54862577 54863008 -195824846 - L1MC/D LINE L1 -5590 480 33 328 252 84 42 chr2 54863176 54863319 -195824535 - L1M4 LINE L1 -1973 4173 4025 26 88 0 0 chr2 54863555 54863623 -195824231 + AT_rich Low_complexity Low_complexity 1 68 0 895 124 36 0 chr2 54863623 54863760 -195824094 - AluSg/x SINE Alu -12 300 159 294 139 39 5 chr2 54863761 54863825 -195824029 + MLT2B1 LTR ERVL 321 508 -12 2558 158 143 11 chr2 54865552 54866078 -195821776 - LTR49 LTR ERV1 0 595 1 2612 27 0 0 chr2 54866769 54867062 -195820792 + AluY SINE Alu 1 293 -18 219 320 155 20 chr2 54867195 54867395 -195820459 + L2 LINE L2 3082 3308 -5 1126 198 66 16 chr2 54867581 54867884 -195819970 - MER33 DNA MER1_type -6 318 1 2152 134 0 0 chr2 54868356 54868663 -195819191 - AluSg SINE Alu -3 307 1 249 330 94 28 chr2 54869630 54869736 -195818118 + L2 LINE L2 3149 3261 -11 378 288 73 57 chr2 54870089 54870266 -195817588 + MIR SINE MIR 18 197 -65 2065 136 120 31 chr2 54870883 54871274 -195816580 + LTR49 LTR ERV1 1 426 -169 1163 164 51 9 chr2 54871278 54871492 -195816362 + AluJb SINE Alu 86 308 -4 206 103 0 26 chr2 54871492 54871531 -195816323 + (GGGA)n Simple_repeat Simple_repeat 2 39 0 512 142 28 19 chr2 54871534 54871640 -195816214 + LTR48 LTR ERV1 619 725 -62 1492 186 0 66 chr2 54872307 54872640 -195815214 - AluJo SINE Alu -1 311 1 384 253 35 59 chr2 54872998 54873168 -195814686 + L1MC5 LINE L1 7749 7914 -47 26 64 0 0 chr2 54873406 54873453 -195814401 + AT_rich Low_complexity Low_complexity 1 47 0 385 256 17 52 chr2 54873839 54874011 -195813843 - L1M4 LINE L1 -2131 4015 3850 21 71 0 0 chr2 54874359 54874401 -195813453 + AT_rich Low_complexity Low_complexity 1 42 0 261 0 0 0 chr2 54874542 54874571 -195813283 + (CA)n Simple_repeat Simple_repeat 2 30 0 350 278 162 14 chr2 54874804 54875024 -195812830 + MIR SINE MIR 7 262 0 1936 164 0 6 chr2 54875519 54875831 -195812023 + AluJb SINE Alu 1 310 -2 307 352 0 0 chr2 54876217 54876305 -195811549 + L2 LINE L2 3148 3235 -37 521 314 147 5 chr2 54876331 54876535 -195811319 - MIR SINE MIR -27 235 3 27 29 0 0 chr2 54876667 54876701 -195811153 + AT_rich Low_complexity Low_complexity 1 34 0 1955 220 55 45 chr2 54876847 54877337 -195810517 + MLT1D LTR MaLR 1 495 -10 1451 202 45 11 chr2 54877679 54877843 -195810011 - AluJo SINE Alu -14 298 118 1943 139 7 14 chr2 54877843 54878138 -195809716 - AluJo SINE Alu -19 293 1 1451 202 45 11 chr2 54878138 54878260 -195809594 - AluJo SINE Alu -194 118 2 225 0 0 0 chr2 54878327 54878352 -195809502 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2201 95 0 7 chr2 54878358 54878643 -195809211 - AluSc SINE Alu -26 283 1 22 0 0 0 chr2 54878643 54878665 -195809189 + AT_rich Low_complexity Low_complexity 1 22 0 1800 224 80 51 chr2 54879117 54879720 -195808134 - MLT1E3 LTR MaLR 0 624 5 646 197 0 7 chr2 54879858 54880005 -195807849 - L1MB8 LINE L1 0 6178 6033 3348 280 52 29 chr2 54880023 54881706 -195806148 + L1M2c LINE L1 3 1965 -4824 1600 185 0 21 chr2 54881706 54882028 -195805826 + AluJo SINE Alu 3 318 0 3348 280 52 29 chr2 54882028 54882059 -195805795 + L1M2c LINE L1 1965 1994 -4795 367 78 94 0 chr2 54882055 54882119 -195805735 + L1M2 LINE L1 4276 4345 -1801 * 4492 175 9 48 chr2 54882168 54882401 -195805453 + L1M2 LINE L1 4325 4565 -1735 2180 119 3 0 chr2 54882401 54882703 -195805151 + AluSg SINE Alu 1 303 -7 4492 175 9 48 chr2 54882703 54882882 -195804972 + L1M2 LINE L1 4565 4749 -1551 208 0 30 30 chr2 54882882 54882915 -195804939 + (CAA)n Simple_repeat Simple_repeat 1 33 0 4492 175 9 48 chr2 54882915 54883831 -195804023 + L1M2 LINE L1 4749 5607 -693 272 263 99 58 chr2 54884817 54884988 -195802866 - L2 LINE L2 -180 3092 2915 2356 104 3 0 chr2 54885733 54886042 -195801812 + AluSg SINE Alu 1 310 0 524 187 80 13 chr2 54886765 54886895 -195800959 - L1PB4 LINE L1 -4 6277 6034 348 323 113 44 chr2 54886910 54887254 -195800600 - L1MC/D LINE L1 -2174 5634 5267 10873 229 39 12 chr2 54887310 54890167 -195797687 - L1 LINE L1 -872 5274 2342 2858 208 69 100 chr2 54890168 54890323 -195797531 - L1PBb LINE L1 -4280 1923 1765 369 0 0 0 chr2 54890323 54890364 -195797490 + (TG)n Simple_repeat Simple_repeat 2 42 0 2858 208 69 100 chr2 54890364 54891652 -195796202 - L1PBb LINE L1 -4438 1765 434 22 35 0 0 chr2 54892802 54892831 -195795023 + AT_rich Low_complexity Low_complexity 1 29 0 215 200 0 0 chr2 54892852 54892887 -195794967 + (CA)n Simple_repeat Simple_repeat 1 35 0 267 255 50 71 chr2 54892962 54893103 -195794751 + L1MEd LINE L1 6 143 -5976 3696 177 30 10 chr2 54893315 54894004 -195793850 - MER44D DNA MER2_type -1 704 2 325 252 73 88 chr2 54894151 54894425 -195793429 + L1MEd LINE L1 562 831 -5288 347 268 57 37 chr2 54894656 54894948 -195792906 + L1MEd LINE L1 1137 1425 -4704 257 102 41 0 chr2 54894951 54895000 -195792854 + GA-rich Low_complexity Low_complexity 3 53 0 236 260 55 0 chr2 54895014 54895087 -195792767 + GA-rich Low_complexity Low_complexity 4 80 0 308 255 148 58 chr2 54895279 54895506 -195792348 + MLT1I LTR MaLR 73 284 -125 22 35 0 0 chr2 54896545 54896574 -195791280 + AT_rich Low_complexity Low_complexity 1 29 0 360 314 53 35 chr2 54896969 54897138 -195790716 - HAL1 LINE L1 -913 1594 1423 32 43 0 0 chr2 54897301 54897347 -195790507 + AT_rich Low_complexity Low_complexity 1 46 0 271 275 14 0 chr2 54899242 54899311 -195788543 + MER94 DNA DNA 3 72 -62 1202 204 0 30 chr2 54899840 54900075 -195787779 - AluJo SINE Alu -84 228 1 2302 107 0 0 chr2 54900269 54900579 -195787275 - AluSg SINE Alu 0 310 1 192 300 43 71 chr2 54900966 54901036 -195786818 + MER5A DNA MER1_type 34 101 -88 297 0 0 0 chr2 54902214 54902247 -195785607 + (TG)n Simple_repeat Simple_repeat 1 33 0 2322 120 25 8 chr2 54903201 54903569 -195784285 - THE1C LTR MaLR 0 375 2 4217 106 6 85 chr2 54903570 54904298 -195783556 - THE1C-int LTR MaLR 0 1580 911 2343 78 18 128 chr2 54904280 54904726 -195783128 - THE1C-int LTR MaLR -1183 397 1 * 1959 145 77 11 chr2 54904726 54905078 -195782776 - THE1C LTR MaLR 0 375 1 754 290 98 23 chr2 54905476 54905824 -195782030 + MLT1I LTR MaLR 3 376 -33 22 35 0 0 chr2 54905825 54905854 -195782000 + AT_rich Low_complexity Low_complexity 1 29 0 22 80 0 0 chr2 54906406 54906456 -195781398 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr2 54906990 54907011 -195780843 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 54907097 54907122 -195780732 + AT_rich Low_complexity Low_complexity 1 25 0 418 317 34 0 chr2 54907238 54907443 -195780411 - L1MEc LINE L1 -1455 5189 4978 2102 264 52 47 chr2 54907452 54908190 -195779664 - L1M4 LINE L1 -5787 755 15 362 235 142 97 chr2 54908213 54908699 -195779155 - L1MEc LINE L1 -1955 4689 4182 240 284 49 0 chr2 54908748 54908850 -195779004 - L1MEc LINE L1 -3612 3032 2926 848 187 0 0 chr2 54908856 54908995 -195778859 - AluJ SINE Alu -4 308 170 399 86 0 17 chr2 54908996 54909054 -195778800 - AluJ SINE Alu -193 109 53 3457 266 86 44 chr2 54909066 54911273 -195776581 - L1MEc LINE L1 -3874 2951 652 975 211 49 5 chr2 54911273 54911477 -195776377 + MER20 DNA MER1_type 1 213 -6 330 314 57 7 chr2 54911512 54911652 -195776202 - L1MEc LINE L1 -6216 609 463 1765 233 80 110 chr2 54911970 54912934 -195774920 + LTR1B LTR ERV1 1 1020 0 300 278 130 9 chr2 54913394 54913502 -195774352 + MIR SINE MIR 15 135 -127 303 71 0 0 chr2 54913627 54913669 -195774185 + (CA)n Simple_repeat Simple_repeat 2 43 0 395 333 69 13 chr2 54915344 54915503 -195772351 - MIR SINE MIR -93 169 2 1491 201 44 17 chr2 54915639 54916047 -195771807 + Charlie1b DNA MER1_type 105 523 0 2288 49 7 7 chr2 54916141 54916428 -195771426 + AluY SINE Alu 1 287 -24 21 0 0 0 chr2 54917096 54917117 -195770737 + AT_rich Low_complexity Low_complexity 1 21 0 245 162 0 0 chr2 54918498 54918535 -195769319 + polypurine Low_complexity Low_complexity 3 39 0 483 200 13 25 chr2 54918535 54918924 -195768930 + GA-rich Low_complexity Low_complexity 1 384 0 26 0 0 0 chr2 54919260 54919286 -195768568 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr2 54920120 54920143 -195767711 + AT_rich Low_complexity Low_complexity 1 23 0 234 182 0 0 chr2 54920219 54920285 -195767569 + GA-rich Low_complexity Low_complexity 4 69 0 1294 236 190 20 chr2 54920863 54921415 -195766439 - L1MC4 LINE L1 -143 7899 7254 1464 232 69 35 chr2 54921427 54921832 -195766022 - L1MC4 LINE L1 -953 7089 6671 243 250 0 0 chr2 54921880 54921964 -195765890 + (TA)n Simple_repeat Simple_repeat 1 84 0 572 289 41 14 chr2 54921970 54922215 -195765639 - L1MC4 LINE L1 -1340 6702 6444 238 138 35 0 chr2 54922611 54922669 -195765185 + GA-rich Low_complexity Low_complexity 1 60 0 788 255 38 0 chr2 54923120 54923304 -195764550 + MIR SINE MIR 6 196 -66 403 280 12 48 chr2 54925053 54925221 -195762633 + LTR2 LTR ERV1 3 164 -285 * 1029 196 0 0 chr2 54925213 54925397 -195762457 + LTR2 LTR ERV1 266 449 0 2102 160 35 13 chr2 54925397 54925771 -195762083 + Harlequin LTR ERV1 1 382 -6514 34119 161 19 12 chr2 54925822 54930624 -195757230 + Harlequin LTR ERV1 467 5317 -2496 203 0 0 36 chr2 54930624 54930652 -195757202 + (TA)n Simple_repeat Simple_repeat 2 28 0 34119 161 19 12 chr2 54930652 54931581 -195756273 + Harlequin LTR ERV1 5317 6238 -1575 361 123 0 0 chr2 54931579 54931636 -195756218 + Harlequin LTR ERV1 6839 6895 -1 * 425 278 6 43 chr2 54931640 54931802 -195756052 + LTR2 LTR ERV1 5 160 -289 * 1002 169 5 5 chr2 54931798 54931982 -195755872 + LTR2 LTR ERV1 266 449 0 268 156 250 0 chr2 54932221 54932260 -195755594 + MADE1 DNA Mariner 1 29 -51 2323 86 0 0 chr2 54932260 54932552 -195755302 - AluY SINE Alu -18 293 2 268 156 250 0 chr2 54932552 54932576 -195755278 + MADE1 DNA Mariner 29 80 0 271 247 78 0 chr2 54932776 54932853 -195755001 - MLT1I LTR MaLR -226 183 101 21 0 0 0 chr2 54933694 54933715 -195754139 + AT_rich Low_complexity Low_complexity 1 21 0 2500 62 0 3 chr2 54933843 54934151 -195753703 - AluY SINE Alu -4 307 1 2120 201 31 48 chr2 54934269 54934792 -195753062 + MER67D LTR ERV1 1 514 0 39 22 0 0 chr2 54936391 54936437 -195751417 + AT_rich Low_complexity Low_complexity 1 46 0 791 154 0 29 chr2 54936731 54936867 -195750987 + FLAM_C SINE Alu 2 133 0 309 322 0 76 chr2 54937200 54937318 -195750536 - L2 LINE L2 -1 3271 3163 207 343 15 0 chr2 54937607 54937674 -195750180 - L2 LINE L2 0 3272 3205 1437 175 31 34 chr2 54938050 54938404 -195749450 - L1MB8 LINE L1 -5 6173 5821 692 205 0 0 chr2 54938412 54938539 -195749315 - AluSg/x SINE Alu -10 300 174 7926 248 52 19 chr2 54938540 54939162 -195748692 - L1MB8 LINE L1 -573 5611 5011 225 0 0 0 chr2 54939162 54939187 -195748667 + (TA)n Simple_repeat Simple_repeat 1 25 0 7926 248 52 19 chr2 54939187 54941898 -195745956 - L1MB8 LINE L1 -1173 5011 2152 2193 141 5 35 chr2 54941898 54941940 -195745914 - THE1B LTR MaLR 0 364 322 2375 82 0 0 chr2 54941940 54942244 -195745610 + AluY SINE Alu 1 304 -7 2193 141 5 35 chr2 54942244 54942571 -195745283 - THE1B LTR MaLR -42 322 6 312 260 39 19 chr2 54942574 54942678 -195745176 - L1MEc LINE L1 -4138 2469 2364 2341 49 0 3 chr2 54942867 54943153 -195744701 + AluY SINE Alu 1 285 -26 21 0 0 0 chr2 54944353 54944374 -195743480 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 54946028 54946064 -195741790 + AT_rich Low_complexity Low_complexity 1 36 0 4617 83 41 34 chr2 54946687 54947372 -195740482 - L1P3 LINE L1 -5193 1268 579 6531 59 42 0 chr2 54947372 54948740 -195739114 + L1PA7 LINE L1 4751 6154 0 193 167 33 83 chr2 54948829 54948889 -195738965 - MIR SINE MIR -38 224 168 233 246 34 76 chr2 54949010 54949128 -195738726 - L1MEc LINE L1 -4511 1915 1803 1354 141 17 47 chr2 54949128 54949261 -195738593 + MER101B LTR ERV1 1 126 -444 2774 123 17 7 chr2 54949261 54949683 -195738171 + MSTA LTR MaLR 1 426 -2 1354 141 17 47 chr2 54949683 54949783 -195738071 + MER101B LTR ERV1 126 227 -343 240 216 90 35 chr2 54949937 54950032 -195737822 + MER101 LTR ERV1 370 459 -15 4012 226 62 43 chr2 54950043 54951883 -195735971 - L1MCb LINE L1 -4690 2055 4 295 279 0 0 chr2 54951927 54951988 -195735866 - L2 LINE L2 0 3272 3212 208 191 0 21 chr2 54952392 54952439 -195735415 + A-rich Low_complexity Low_complexity 2 47 0 183 355 145 14 chr2 54952608 54952746 -195735108 - MIR3 SINE MIR -31 177 22 204 202 67 169 chr2 54953962 54954051 -195733803 - MER5A DNA MER1_type -94 95 16 26 0 0 0 chr2 54954557 54954583 -195733271 + AT_rich Low_complexity Low_complexity 1 26 0 217 232 18 18 chr2 54954780 54954836 -195733018 + (TA)n Simple_repeat Simple_repeat 1 56 0 201 297 78 0 chr2 54955036 54955100 -195732754 + MIR SINE MIR 75 143 -65 304 276 147 9 chr2 54956097 54956213 -195731641 + L1MEd LINE L1 23 154 -5965 265 335 50 31 chr2 54956294 54956455 -195731399 + L1MEd LINE L1 447 610 -5509 189 0 0 0 chr2 54956455 54956476 -195731378 + (A)n Simple_repeat Simple_repeat 1 21 0 316 326 65 45 chr2 54956524 54956880 -195730974 + L1MEd LINE L1 694 1056 -5063 24487 59 2 0 chr2 54957061 54960164 -195727690 + L1P LINE L1 4 3111 -3035 2002 136 10 16 chr2 54960327 54960501 -195727353 - AluSx SINE Alu -5 307 134 2290 96 3 7 chr2 54960501 54960804 -195727050 - AluY SINE Alu -9 302 1 2002 136 10 16 chr2 54960804 54960938 -195726916 - AluSx SINE Alu -178 134 1 21 57 0 0 chr2 54961752 54961787 -195726067 + AT_rich Low_complexity Low_complexity 1 35 0 494 319 108 47 chr2 54961889 54962421 -195725433 - L1M4 LINE L1 -1696 4450 3867 240 35 0 0 chr2 54962421 54962450 -195725404 + (TA)n Simple_repeat Simple_repeat 2 30 0 494 319 108 47 chr2 54962450 54962592 -195725262 - L1M4 LINE L1 -2279 3867 3735 26 30 0 0 chr2 54962856 54962889 -195724965 + AT_rich Low_complexity Low_complexity 1 33 0 743 153 33 7 chr2 54963130 54963280 -195724574 - L1MB4 LINE L1 -2 6178 6025 365 320 180 28 chr2 54964501 54964972 -195722882 + L2 LINE L2 2753 3309 -4 1628 135 82 25 chr2 54965318 54965599 -195722255 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr2 54965709 54965730 -195722124 + AT_rich Low_complexity Low_complexity 1 21 0 307 322 167 13 chr2 54965999 54966226 -195721628 - MIR SINE MIR 0 262 1 211 259 0 35 chr2 54966585 54966643 -195721211 + (CATA)n Simple_repeat Simple_repeat 4 59 0 357 292 86 21 chr2 54967477 54967700 -195720154 + LTR8 LTR ERV1 19 265 -462 914 226 128 64 chr2 54967773 54968180 -195719674 + LTR8A LTR ERV1 287 719 -8 545 277 39 66 chr2 54968181 54968529 -195719325 + MER21B LTR ERV1 1 388 -475 400 268 15 9 chr2 54968530 54968675 -195719179 + L1MB7 LINE L1 4183 4335 -1811 2266 77 3 3 chr2 54968772 54969059 -195718795 + AluSg SINE Alu 21 307 -3 1669 241 24 12 chr2 54969367 54969878 -195717976 + L1MD2 LINE L1 755 1271 -5138 3850 244 82 58 chr2 54969880 54971719 -195716135 + L1MD2 LINE L1 3711 5593 -813 2004 255 77 29 chr2 54971791 54972529 -195715325 + L1MD2 LINE L1 5846 6619 0 2439 124 8 89 chr2 54974542 54975026 -195712828 - MER65A LTR ERV1 0 445 1 3411 203 20 18 chr2 54975429 54976229 -195711625 + L1MB7 LINE L1 5227 6028 -156 1051 181 62 81 chr2 54976231 54976490 -195711364 - AluJo SINE Alu -49 263 10 626 136 57 36 chr2 54976514 54976654 -195711200 + L1MB8 LINE L1 6035 6177 -1 1293 194 143 31 chr2 54977698 54978280 -195709574 - LTR48 LTR ERV1 -52 735 1 380 289 188 18 chr2 54979121 54979339 -195708515 + MIR SINE MIR 8 262 0 309 227 43 129 chr2 54979476 54979507 -195708347 - L1MC4 LINE L1 -2 8040 8008 1565 176 77 20 chr2 54979507 54979859 -195707995 + THE1C LTR MaLR 4 375 0 9608 135 43 7 chr2 54979862 54981385 -195706469 + THE1C-int LTR MaLR 3 1580 0 1636 148 75 34 chr2 54981388 54981746 -195706108 + THE1C LTR MaLR 3 375 0 309 227 43 129 chr2 54981746 54981869 -195705985 - L1MC4 LINE L1 -38 8004 7892 224 246 14 0 chr2 54981872 54981941 -195705913 + (TA)n Simple_repeat Simple_repeat 1 70 0 551 257 59 30 chr2 54981976 54982178 -195705676 - L1MC4 LINE L1 -147 7895 7688 2279 94 3 0 chr2 54983706 54984013 -195703841 + AluY SINE Alu 1 308 -3 1994 250 124 24 chr2 54984167 54984932 -195702922 - L1MC4 LINE L1 -637 7405 6564 473 231 0 20 chr2 54984936 54985048 -195702806 + LTR48 LTR ERV1 1 110 -597 1988 197 92 34 chr2 54986090 54986249 -195701605 + LTR48 LTR ERV1 84 232 -555 1355 157 0 0 chr2 54986249 54986485 -195701369 + L1PB1 LINE L1 5915 6150 -1 1988 197 92 34 chr2 54986485 54986859 -195700995 + LTR48 LTR ERV1 232 648 -139 1754 148 62 31 chr2 54987434 54987791 -195700063 + THE1C LTR MaLR 8 375 0 1216 162 21 43 chr2 54988019 54988254 -195699600 + THE1B LTR MaLR 1 230 -134 573 194 0 151 chr2 54988254 54988440 -195699414 - L1PA15-16 LINE L1 -5414 1435 1278 1186 121 0 0 chr2 54988784 54988950 -195698904 - AluSg/x SINE Alu -18 294 129 2017 148 0 0 chr2 54988954 54989264 -195698590 - AluSq SINE Alu 0 313 4 1299 185 0 4 chr2 54989264 54989491 -195698363 - AluY SINE Alu -76 235 10 204 163 0 0 chr2 54990639 54990682 -195697172 + T-rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 54990807 54990830 -195697024 + AT_rich Low_complexity Low_complexity 1 23 0 964 181 19 15 chr2 54991754 54991959 -195695895 - L1MD1 LINE L1 0 6242 6037 27 0 0 0 chr2 54991964 54991991 -195695863 + AT_rich Low_complexity Low_complexity 1 27 0 2784 58 0 0 chr2 54991991 54992339 -195695515 - L1PA6 LINE L1 -11 6143 5796 291 268 42 0 chr2 54992557 54992628 -195695226 - MIR SINE MIR -71 191 118 185 276 103 11 chr2 54993003 54993090 -195694764 - MIR SINE MIR 0 262 168 1678 167 76 23 chr2 54993219 54993370 -195694484 - MLT1A1 LTR MaLR -1 364 222 2400 128 8 11 chr2 54993370 54993746 -195694108 + THE1C LTR MaLR 1 375 0 1678 167 76 23 chr2 54993746 54993936 -195693918 - MLT1A1 LTR MaLR -143 222 5 245 175 18 35 chr2 54994198 54994255 -195693599 - HsTC2 DNA Tc2 -612 1286 1231 * 388 233 25 42 chr2 54994249 54994369 -195693485 - HsTC2 DNA Tc2 -1771 127 10 449 189 270 0 chr2 54995109 54995257 -195692597 - MER53 DNA DNA 0 189 2 249 370 22 7 chr2 54995305 54995440 -195692414 + MLT1I LTR MaLR 99 235 -174 2252 107 16 8 chr2 54996127 54996493 -195691361 + L1MA2 LINE L1 5936 6304 0 479 267 31 25 chr2 54997310 54997471 -195690383 + ORSL DNA AcHobo 114 275 0 200 379 105 11 chr2 54998418 54998608 -195689246 - MIR SINE MIR -41 221 14 * 282 277 15 0 chr2 54998583 54998648 -195689206 + MIR SINE MIR 17 82 -180 * 404 318 106 11 chr2 54998635 54998824 -195689030 + L2 LINE L2 2829 3035 -278 485 290 23 56 chr2 54998834 54999048 -195688806 - L2 LINE L2 -10 3303 3097 1679 135 0 4 chr2 54999872 55000109 -195687745 + AluSq SINE Alu 1 236 -77 203 284 0 15 chr2 55000941 55001008 -195686846 + L2 LINE L2 3244 3309 -4 219 36 0 0 chr2 55001216 55001244 -195686610 + (TTG)n Simple_repeat Simple_repeat 1 28 0 3432 194 91 0 chr2 55001259 55001974 -195685880 - L1PA8 LINE L1 -14 7596 6817 18788 186 12 9 chr2 55002196 55006008 -195681846 - L1PA8 LINE L1 -1521 6063 1451 1390 200 32 0 chr2 55007527 55007837 -195680017 + MER33 DNA MER1_type 1 320 -4 1971 130 10 0 chr2 55008378 55008670 -195679184 + AluSc SINE Alu 1 295 -14 295 292 31 21 chr2 55009221 55009317 -195678537 - MIR SINE MIR -64 144 48 6066 210 20 4 chr2 55010465 55011685 -195676169 + MSTA-int LTR MaLR 413 1651 0 1914 168 134 0 chr2 55011689 55012063 -195675791 + MSTA LTR MaLR 5 428 0 306 132 0 0 chr2 55012235 55012288 -195675566 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 21 0 0 0 chr2 55013252 55013273 -195674581 + AT_rich Low_complexity Low_complexity 1 21 0 259 258 0 0 chr2 55013639 55013705 -195674149 + A-rich Low_complexity Low_complexity 1 66 0 268 216 0 0 chr2 55013880 55013931 -195673923 + HAL1 LINE L1 574 624 -1883 24 0 0 0 chr2 55014289 55014313 -195673541 + AT_rich Low_complexity Low_complexity 1 24 0 490 240 61 124 chr2 55014409 55014918 -195672936 + HAL1 LINE L1 2029 2505 -2 * 3934 193 39 20 chr2 55014907 55015737 -195672117 + L1MCa LINE L1 1 845 -5581 403 303 212 0 chr2 55016874 55017072 -195670782 - MIR SINE MIR -3 259 20 825 130 0 45 chr2 55017087 55017241 -195670613 - L1MB1 LINE L1 -1 6167 6021 300 259 116 18 chr2 55017395 55017507 -195670347 - L1ME4a LINE L1 -197 5924 5802 294 220 0 0 chr2 55017903 55017962 -195669892 - MER6 DNA MER2_type -4 861 803 292 194 333 21 chr2 55017964 55018057 -195669797 + MER6 DNA MER2_type 17 859 -6 2581 39 3 0 chr2 55019175 55019482 -195668372 + AluY SINE Alu 1 308 -3 28 0 0 0 chr2 55020576 55020604 -195667250 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr2 55020833 55020866 -195666988 + AT_rich Low_complexity Low_complexity 1 33 0 247 313 73 21 chr2 55020932 55021028 -195666826 + MIR SINE MIR 34 134 -74 343 278 106 35 chr2 55021346 55021573 -195666281 + MIR SINE MIR 20 262 0 784 189 0 31 chr2 55021644 55021803 -195666051 + FRAM SINE Alu 1 153 -23 201 300 86 0 chr2 55021910 55021980 -195665874 - L2 LINE L2 -9 3304 3229 424 314 81 17 chr2 55022007 55022243 -195665611 + MIR SINE MIR 11 261 -1 326 276 171 0 chr2 55022906 55023058 -195664796 - MER3 DNA MER1_type -30 179 2 198 118 0 0 chr2 55023873 55023907 -195663947 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 235 289 40 0 chr2 55023909 55023985 -195663869 - L2 LINE L2 -10 3303 3225 443 360 53 63 chr2 55024215 55024742 -195663112 - L2 LINE L2 -462 2852 2331 489 34 0 0 chr2 55024780 55024839 -195663015 + (TG)n Simple_repeat Simple_repeat 2 60 0 21 36 0 0 chr2 55024839 55024867 -195662987 + AT_rich Low_complexity Low_complexity 1 28 0 1444 302 35 16 chr2 55025761 55026268 -195661586 + L1MA10 LINE L1 1 517 -5624 433 165 25 58 chr2 55026290 55026411 -195661443 + L1MA10 LINE L1 3304 3420 -2790 4343 184 22 5 chr2 55026511 55027392 -195660462 + L1MA10 LINE L1 3761 4656 -1554 273 231 13 13 chr2 55027394 55027472 -195660382 + LTR48B LTR ERV1 7 84 -560 * 1528 231 71 13 chr2 55027462 55027869 -195659985 + MER39 LTR ERV1 130 688 -19 3643 182 28 67 chr2 55027883 55029245 -195658609 + L1MA10 LINE L1 4649 5944 -454 1833 196 11 11 chr2 55029245 55029607 -195658247 - MLT1A1 LTR MaLR -1 364 3 3643 182 28 67 chr2 55029607 55029927 -195657927 + L1MA10 LINE L1 5944 6275 -123 659 91 0 0 chr2 55030038 55030126 -195657728 + THE1C LTR MaLR 287 374 -1 327 320 70 17 chr2 55030302 55030474 -195657380 + MIR SINE MIR 1 181 -81 545 0 0 15 chr2 55030598 55030664 -195657190 + (TTTC)n Simple_repeat Simple_repeat 4 68 0 292 257 178 33 chr2 55031915 55032219 -195655635 + L1ME LINE L1 5506 5853 -268 234 0 0 0 chr2 55032268 55032294 -195655560 + (TA)n Simple_repeat Simple_repeat 1 26 0 25 51 0 0 chr2 55032356 55032395 -195655459 + AT_rich Low_complexity Low_complexity 1 39 0 803 178 86 0 chr2 55033494 55033668 -195654186 + MER53 DNA DNA 1 189 0 30 45 0 0 chr2 55034555 55034599 -195653255 + AT_rich Low_complexity Low_complexity 1 44 0 2281 198 239 73 chr2 55035013 55035887 -195651967 + LTR28 LTR ERV1 2 1020 0 1001 121 0 6 chr2 55036013 55036178 -195651676 - L1MA6 LINE L1 0 6300 6137 1013 194 37 0 chr2 55036189 55036380 -195651474 + AluJo SINE Alu 97 294 -18 1271 169 27 83 chr2 55036380 55036718 -195651136 - L1MA6 LINE L1 -156 6144 5826 265 276 76 48 chr2 55036734 55036879 -195650975 - MER5A DNA MER1_type -3 186 38 183 342 40 26 chr2 55036867 55036943 -195650911 + L3b LINE CR1 1498 1574 -9 * 476 283 124 75 chr2 55038135 55038916 -195648938 + L1MEd LINE L1 425 1243 -4876 180 77 0 0 chr2 55038927 55038953 -195648901 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 925 296 51 33 chr2 55039262 55039657 -195648197 - LTR16B LTR ERVL -13 451 50 5631 103 14 2 chr2 55039685 55040489 -195647365 + L1PA11 LINE L1 5362 6174 0 698 173 10 96 chr2 55040488 55040642 -195647212 - L1MC/D LINE L1 -2193 5592 5426 * 1467 172 28 69 chr2 55040642 55040843 -195647011 - AluJb SINE Alu -4 308 123 189 74 0 0 chr2 55040843 55040870 -195646984 + (TATG)n Simple_repeat Simple_repeat 2 28 0 1467 172 28 69 chr2 55040870 55040988 -195646866 - AluJb SINE Alu -189 123 2 698 173 10 96 chr2 55040988 55041002 -195646852 - L1MC/D LINE L1 -2359 5426 5442 2183 119 7 0 chr2 55041002 55041312 -195646542 - AluSx SINE Alu 0 312 1 698 173 10 96 chr2 55041312 55041350 -195646504 - L1MC/D LINE L1 -2342 5443 5403 763 218 116 112 chr2 55041363 55041593 -195646261 - L1MC/D LINE L1 -931 5215 4987 282 95 24 0 chr2 55041593 55041635 -195646219 + U2 snRNA snRNA 1 43 -145 763 218 116 112 chr2 55041635 55041881 -195645973 - L1MC/D LINE L1 -1159 4987 4696 23 0 0 0 chr2 55041962 55041985 -195645869 + AT_rich Low_complexity Low_complexity 1 23 0 413 237 110 8 chr2 55042504 55042622 -195645232 - MIR SINE MIR -17 245 116 697 170 143 24 chr2 55043013 55043397 -195644457 + LTR54B LTR ERV1 1 496 -2 1543 223 71 37 chr2 55044040 55044916 -195642938 + L1MD3 LINE L1 6805 7821 -174 6649 39 0 5 chr2 55045193 55046036 -195641818 - L1P LINE L1 -2197 3949 3111 7535 32 0 2 chr2 55046036 55047607 -195640247 + L1PA3 LINE L1 4588 6155 0 1319 214 123 52 chr2 55047860 55048379 -195639475 - MER34B LTR ERV1 -5 560 5 228 111 0 0 chr2 55048571 55048607 -195639247 + (CA)n Simple_repeat Simple_repeat 1 36 0 778 221 111 84 chr2 55048642 55049013 -195638841 - LTR37A LTR ERV1 0 426 46 216 247 0 96 chr2 55049124 55049197 -195638657 - L2 LINE L2 0 3313 3248 615 249 106 106 chr2 55049205 55049321 -195638533 - LTR40a LTR ERVL -1 518 403 2371 74 3 0 chr2 55049321 55049631 -195638223 - AluY SINE Alu 0 311 1 615 249 106 106 chr2 55049631 55050032 -195637822 - LTR40a LTR ERVL -115 404 1 30 0 0 0 chr2 55051264 55051294 -195636560 + AT_rich Low_complexity Low_complexity 1 30 0 2181 115 0 0 chr2 55051300 55051595 -195636259 + AluSc SINE Alu 1 295 -14 23 0 0 0 chr2 55051950 55051973 -195635881 + AT_rich Low_complexity Low_complexity 1 23 0 5268 214 18 15 chr2 55052621 55053787 -195634067 + L1M1 LINE L1 23 1192 -6373 6029 146 21 11 chr2 55053812 55055869 -195631985 - L1MA1 LINE L1 -6 6296 4220 1403 218 81 113 chr2 55055873 55056669 -195631185 + LTR1B LTR ERV1 8 972 -48 417 294 0 9 chr2 55056732 55056841 -195631013 + LTR28 LTR ERV1 913 1020 0 4772 234 44 6 chr2 55056841 55058358 -195629496 - L1M4 LINE L1 -1926 5639 4009 2022 149 0 7 chr2 55058358 55058659 -195629195 - AluSx SINE Alu -13 299 1 4772 234 44 6 chr2 55058659 55059249 -195628605 - L1M4 LINE L1 -3556 4009 3443 * 10369 149 26 11 chr2 55059240 55061077 -195626777 + L1M1 LINE L1 1172 3035 -4530 470 324 110 43 chr2 55061217 55061563 -195626291 - HAL1 LINE L1 -1550 957 589 1896 223 24 2 chr2 55061568 55061986 -195625868 - MSTB1 LTR MaLR 0 432 6 4514 175 87 20 chr2 55063121 55063475 -195624379 - L1PB3 LINE L1 -8 6146 5817 270 56 0 0 chr2 55063475 55063511 -195624343 + (TG)n Simple_repeat Simple_repeat 2 37 0 4514 175 87 20 chr2 55063511 55064776 -195623078 - L1PB3 LINE L1 -337 5817 4411 2537 56 0 0 chr2 55064954 55065259 -195622595 + AluY SINE Alu 1 305 -6 2358 83 0 0 chr2 55067716 55068006 -195619848 - AluY SINE Alu -21 290 1 913 258 32 28 chr2 55068751 55069003 -195618851 + MIR SINE MIR 2 254 -8 29 28 0 0 chr2 55069510 55069546 -195618308 + AT_rich Low_complexity Low_complexity 1 36 0 1971 188 8 3 chr2 55069934 55070317 -195617537 - L1PB4 LINE L1 -4 6152 5768 11461 198 24 13 chr2 55070319 55074121 -195613733 - L1PA15 LINE L1 -21 7582 3744 343 305 160 50 chr2 55075002 55075464 -195612390 + L1M2 LINE L1 892 1404 -5445 3071 213 29 30 chr2 55076577 55077062 -195610792 - L1PA15 LINE L1 -4308 3276 2785 2404 83 0 0 chr2 55077062 55077362 -195610492 - AluSc SINE Alu -9 300 1 3071 213 29 30 chr2 55077362 55077808 -195610046 - L1PA15 LINE L1 -4799 2785 2340 11411 240 30 41 chr2 55077836 55084758 -195603096 - L1P5 LINE L1 -373 6486 1 1759 106 0 4 chr2 55084794 55085031 -195602823 + AluYa5 SINE Alu 1 236 -75 2521 81 0 0 chr2 55085031 55085340 -195602514 + AluSq SINE Alu 4 313 0 1024 151 0 0 chr2 55085344 55085510 -195602344 + AluSg/x SINE Alu 129 294 -18 565 129 0 0 chr2 55085761 55085846 -195602008 - AluS SINE Alu -228 85 1 187 284 122 11 chr2 55086059 55086204 -195601650 + MIR SINE MIR 93 262 0 234 0 0 0 chr2 55086595 55086621 -195601233 + (A)n Simple_repeat Simple_repeat 1 26 0 1420 105 29 0 chr2 55136888 55137098 -195550756 - L1PA13 LINE L1 -3 6160 5945 11232 42 0 0 chr2 55137740 55139136 -195548718 + L1P LINE L1 1185 2580 -3566 1575 196 18 0 chr2 55140336 55140617 -195547237 + AluJo SINE Alu 1 286 -26 22135 99 8 14 chr2 55141416 55144770 -195543084 - L1PA8 LINE L1 0 6172 2852 2458 90 0 0 chr2 55144770 55145081 -195542773 - AluY SINE Alu 0 311 1 22135 99 8 14 chr2 55145081 55145957 -195541897 - L1PA8 LINE L1 -3320 2852 1972 227 170 0 19 chr2 55146278 55146331 -195541523 + GA-rich Low_complexity Low_complexity 3 54 0 217 352 68 0 chr2 55147033 55147121 -195540733 + MIR SINE MIR 55 148 -60 21 71 0 0 chr2 55147136 55147178 -195540676 + AT_rich Low_complexity Low_complexity 1 42 0 1514 234 16 32 chr2 55149417 55149797 -195538057 + MLT1A2 LTR MaLR 1 374 0 536 319 93 5 chr2 55150330 55150546 -195537308 + MIR SINE MIR 28 262 0 400 293 37 52 chr2 55150488 55150679 -195537175 - MIR SINE MIR -27 235 48 * 2302 87 10 0 chr2 55152313 55152611 -195535243 + AluSq SINE Alu 1 301 -12 223 369 12 71 chr2 55153658 55153826 -195534028 - MIR3 SINE MIR -14 194 37 26 0 0 0 chr2 55153913 55153939 -195533915 + AT_rich Low_complexity Low_complexity 1 26 0 28 61 0 0 chr2 55154720 55154769 -195533085 + AT_rich Low_complexity Low_complexity 1 49 0 24 77 0 0 chr2 55154813 55154865 -195532989 + AT_rich Low_complexity Low_complexity 1 52 0 22 56 0 0 chr2 55155059 55155095 -195532759 + AT_rich Low_complexity Low_complexity 1 36 0 2073 174 77 34 chr2 55155468 55155910 -195531944 - LOR1b LTR ERV1 0 461 1 22 35 0 0 chr2 55156044 55156073 -195531781 + AT_rich Low_complexity Low_complexity 1 29 0 444 296 87 0 chr2 55156080 55156252 -195531602 + L1M4 LINE L1 5450 5636 -538 419 115 0 26 chr2 55156277 55156355 -195531499 + L1MB8 LINE L1 6103 6178 0 2253 104 0 10 chr2 55157177 55157486 -195530368 + AluSx SINE Alu 1 306 -6 267 270 67 22 chr2 55157610 55157699 -195530155 + MIR SINE MIR 68 160 -102 1890 188 14 59 chr2 55158862 55159351 -195528503 - L1MB8 LINE L1 -1 6177 5711 * 6587 137 28 18 chr2 55159332 55160751 -195527103 - L1MA3 LINE L1 0 6305 4874 225 306 194 44 chr2 55160755 55160935 -195526919 - MIR SINE MIR -48 214 8 286 332 57 4 chr2 55160941 55161170 -195526684 + L1ME LINE L1 5597 5837 -284 2294 105 0 3 chr2 55162259 55162572 -195525282 - AluSq SINE Alu -1 312 1 2624 39 0 13 chr2 55162643 55162954 -195524900 - AluY SINE Alu -4 307 1 738 278 72 19 chr2 55162954 55163274 -195524580 + MER46C DNA MER2_type 2 338 0 526 291 153 34 chr2 55163297 55163826 -195524028 - L1ME4a LINE L1 -52 6069 5478 324 285 63 25 chr2 55164422 55164580 -195523274 + MIR SINE MIR 93 256 -6 433 282 63 0 chr2 55164741 55164883 -195522971 + MIR SINE MIR 105 255 -7 27 49 0 0 chr2 55165227 55165268 -195522586 + AT_rich Low_complexity Low_complexity 1 41 0 1826 199 15 56 chr2 55166107 55166575 -195521279 + LTR2 LTR ERV1 1 449 0 2043 94 84 101 chr2 55167733 55168138 -195519716 + MER48 LTR ERV1 1 398 0 2009 216 114 80 chr2 55168932 55169730 -195518124 + LTR1B LTR ERV1 2 826 0 243 388 41 54 chr2 55171569 55171863 -195515991 + L2 LINE L2 2894 3183 -89 22 35 0 0 chr2 55172799 55172828 -195515026 + AT_rich Low_complexity Low_complexity 1 29 0 198 103 0 0 chr2 55173151 55173180 -195514674 + (GA)n Simple_repeat Simple_repeat 2 30 0 444 190 84 56 chr2 55173340 55173367 -195514487 + MLT1B LTR MaLR 11 36 -354 315 0 0 0 chr2 55173367 55173402 -195514452 + (TG)n Simple_repeat Simple_repeat 1 35 0 444 190 84 56 chr2 55173402 55173516 -195514338 + MLT1B LTR MaLR 36 156 -234 2227 189 39 92 chr2 55173518 55174017 -195513837 + MLT2B1 LTR ERVL 1 470 -50 306 87 0 0 chr2 55174017 55174063 -195513791 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 2227 189 39 92 chr2 55174063 55174107 -195513747 + MLT2B1 LTR ERVL 470 515 -5 379 144 27 67 chr2 55174163 55174309 -195513545 + MLT1A2 LTR MaLR 143 359 -15 428 355 59 41 chr2 55174382 55174774 -195513080 - L2 LINE L2 0 3313 2915 369 322 8 8 chr2 55176921 55177039 -195510815 - MIR SINE MIR -87 175 58 186 43 0 0 chr2 55177633 55177656 -195510198 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 25 0 0 0 chr2 55178435 55178460 -195509394 + AT_rich Low_complexity Low_complexity 1 25 0 273 264 39 23 chr2 55178542 55178671 -195509183 + L1MDa LINE L1 2192 2322 -4218 1938 253 115 42 chr2 55179011 55180316 -195507538 + L1MDa LINE L1 1002 2401 -4139 324 244 82 37 chr2 55180415 55180550 -195507304 + L1ME1 LINE L1 6021 6161 -5 27 0 0 0 chr2 55180932 55180959 -195506895 + AT_rich Low_complexity Low_complexity 1 27 0 2429 81 3 0 chr2 55181455 55181765 -195506089 - AluY SINE Alu 0 311 1 21 0 0 0 chr2 55182353 55182374 -195505480 + AT_rich Low_complexity Low_complexity 1 21 0 1934 120 0 14 chr2 55182683 55182987 -195504867 - AluSx SINE Alu 0 302 3 2081 94 0 45 chr2 55184311 55184619 -195503235 - AluY SINE Alu -17 294 1 1049 79 0 0 chr2 55184619 55184746 -195503108 - AluSq/x SINE Alu -176 137 11 229 176 39 0 chr2 55184825 55184876 -195502978 + T-rich Low_complexity Low_complexity 3 55 0 525 258 120 0 chr2 55185007 55185174 -195502680 + MER5A DNA MER1_type 2 188 -1 304 270 113 9 chr2 55185217 55185332 -195502522 - MER58A DNA MER1_type -55 169 43 2037 128 3 34 chr2 55185431 55185617 -195502237 - AluSq SINE Alu -2 311 138 2437 63 0 3 chr2 55185617 55185917 -195501937 - AluY SINE Alu 0 311 13 2037 128 3 34 chr2 55185917 55186051 -195501803 - AluSq SINE Alu -175 138 1 3169 263 62 23 chr2 55187367 55188792 -195499062 - L1M4 LINE L1 -769 5377 3897 234 267 59 20 chr2 55189168 55189269 -195498585 + HAL1b LINE L1 1188 1292 -56 34 72 0 0 chr2 55189278 55189347 -195498507 + AT_rich Low_complexity Low_complexity 1 69 0 2159 144 14 22 chr2 55189513 55189880 -195497974 + THE1B LTR MaLR 1 364 0 595 351 95 23 chr2 55190204 55190347 -195497507 - L2 LINE L2 0 3313 3182 2138 131 0 0 chr2 55190347 55190644 -195497210 + AluSx SINE Alu 1 297 -15 595 351 95 23 chr2 55190644 55190942 -195496912 - L2 LINE L2 -131 3182 2840 196 274 26 68 chr2 55191245 55191362 -195496492 + MIR SINE MIR 95 206 -56 1608 211 64 64 chr2 55191527 55192029 -195495825 - MLT1D LTR MaLR -3 502 1 2189 71 11 0 chr2 55192298 55192578 -195495276 + MLT2A1 LTR ERVL 1 283 -161 326 49 0 0 chr2 55192579 55192620 -195495234 + MLT2A1 LTR ERVL 403 443 -1 195 313 30 61 chr2 55193294 55193393 -195494461 - L2 LINE L2 -309 2963 2868 6686 143 48 13 chr2 55193649 55194836 -195493018 + Tigger3b DNA MER2_type 1 1229 -2 21 0 0 0 chr2 55195548 55195569 -195492285 + AT_rich Low_complexity Low_complexity 1 21 0 405 39 0 0 chr2 55195656 55195707 -195492147 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 215 250 54 80 chr2 55195751 55195863 -195491991 - MIR SINE MIR -78 184 76 405 312 51 0 chr2 55195975 55196113 -195491741 + MIR SINE MIR 106 250 -12 615 308 119 57 chr2 55196126 55196370 -195491484 - MLT1G1 LTR MaLR -8 587 360 3319 35 5 0 chr2 55196370 55196771 -195491083 - L1PA3 LINE L1 0 6155 5753 615 308 119 57 chr2 55196771 55197038 -195490816 - MLT1G1 LTR MaLR -235 360 1 1460 221 56 69 chr2 55197097 55197562 -195490292 - MLT1C LTR MaLR 0 467 9 531 0 0 0 chr2 55197665 55197724 -195490130 + (TTATA)n Simple_repeat Simple_repeat 5 63 0 2035 215 25 36 chr2 55197830 55198304 -195489550 + MER70A LTR ERVL 3 471 -1 938 266 8 27 chr2 55199559 55199815 -195488039 - MIR SINE MIR 0 262 12 1689 154 31 74 chr2 55201042 55201432 -195486422 - THE1C LTR MaLR -2 373 1 8854 139 47 36 chr2 55201432 55202996 -195484858 - THE1C-int LTR MaLR 0 1580 1 1336 178 59 68 chr2 55202996 55203334 -195484520 - THE1C LTR MaLR 0 375 41 3266 101 20 0 chr2 55203334 55203778 -195484076 - MLT2A2 LTR ERVL 0 453 1 42575 83 12 9 chr2 55203778 55209411 -195478443 - HERVL-A2 LTR ERVL 0 5654 1 311 78 78 0 chr2 55209411 55209462 -195478392 - MLT2A2 LTR ERVL 0 444 390 23 0 0 0 chr2 55209475 55209498 -195478356 + AT_rich Low_complexity Low_complexity 1 23 0 2766 119 22 0 chr2 55209498 55209902 -195477952 - MLT2A2 LTR ERVL -40 413 1 400 22 0 0 chr2 55209902 55209947 -195477907 - THE1C LTR MaLR -330 45 1 1520 251 43 14 chr2 55210525 55211015 -195476839 - MLT1D LTR MaLR 0 505 2 306 115 0 0 chr2 55211560 55211612 -195476242 + (CA)n Simple_repeat Simple_repeat 2 53 0 25 0 0 0 chr2 55211705 55211730 -195476124 + AT_rich Low_complexity Low_complexity 1 25 0 1779 245 44 53 chr2 55212354 55212900 -195474954 - MER77 LTR ERV1 -9 596 56 392 302 78 11 chr2 55213542 55213721 -195474133 + L1MC4a LINE L1 6663 6853 -955 742 248 15 55 chr2 55213725 55213927 -195473927 + MER8 DNA MER2_type 2 195 -44 284 210 309 0 chr2 55213928 55214009 -195473845 + MER8 DNA MER2_type 134 239 0 944 237 11 56 chr2 55214039 55214414 -195473440 + L1MC5 LINE L1 6878 7235 -726 384 135 0 14 chr2 55214445 55214519 -195473335 - MER33 DNA MER1_type -1 362 290 395 275 17 25 chr2 55214521 55214641 -195473213 - MER33 DNA MER1_type -203 121 3 229 250 51 110 chr2 55214699 55214867 -195472987 + L1MC5 LINE L1 7305 7481 -480 2240 92 0 20 chr2 55214867 55215161 -195472693 + AluSg SINE Alu 10 297 -13 486 49 0 0 chr2 55215161 55215222 -195472632 + (GA)n Simple_repeat Simple_repeat 2 62 0 229 250 51 110 chr2 55215222 55215288 -195472566 + L1MC5 LINE L1 7479 7526 -435 362 281 178 0 chr2 55215310 55215445 -195472409 + L1ME1 LINE L1 44 202 -6194 5517 236 55 36 chr2 55215453 55217412 -195470442 + L1ME1 LINE L1 3322 5352 -883 2309 79 0 0 chr2 55217412 55217722 -195470132 + AluY SINE Alu 1 310 0 5517 236 55 36 chr2 55217722 55218623 -195469231 + L1ME1 LINE L1 5352 6235 0 303 304 37 75 chr2 55218698 55218859 -195468995 + L1ME2 LINE L1 5961 6115 -49 1264 185 8 33 chr2 55218863 55219106 -195468748 + MSTB LTR MaLR 3 239 -187 1694 169 58 28 chr2 55219521 55219883 -195467971 - THE1C LTR MaLR 0 375 3 5608 143 69 8 chr2 55219934 55220847 -195467007 - THE1C-int LTR MaLR -610 970 2 2033 153 47 6 chr2 55220848 55221208 -195466646 - THE1C LTR MaLR 0 375 1 285 338 60 40 chr2 55221887 55222038 -195465816 + MLT1J LTR MaLR 104 257 -254 903 250 4 22 chr2 55225192 55225420 -195462434 - MER58A DNA MER1_type 0 224 1 1532 184 69 149 chr2 55226010 55226560 -195461294 - MER67D LTR ERV1 -4 510 5 211 328 102 8 chr2 55226709 55226837 -195461017 - MIR SINE MIR -74 188 49 944 163 45 63 chr2 55227019 55227240 -195460614 - MER20 DNA MER1_type -2 217 1 180 0 0 0 chr2 55227582 55227602 -195460252 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 1293 187 76 46 chr2 55229017 55229386 -195458468 - LTR37A LTR ERV1 -29 397 18 455 326 65 65 chr2 55229749 55230209 -195457645 + MLT1L LTR MaLR 144 603 -12 272 120 20 0 chr2 55230323 55230373 -195457481 + CT-rich Low_complexity Low_complexity 2 52 0 252 331 91 20 chr2 55230481 55230735 -195457119 - L1ME LINE L1 -289 5832 5561 1387 210 24 14 chr2 55232245 55232536 -195455318 - MER67D LTR ERV1 -219 295 2 187 309 0 18 chr2 55233028 55233083 -195454771 - L2 LINE L2 -6 3307 3254 722 261 6 0 chr2 55233408 55233565 -195454289 - MLT1A2 LTR MaLR -2 372 215 222 37 0 0 chr2 55233587 55233614 -195454240 + (GA)n Simple_repeat Simple_repeat 1 27 0 11642 199 45 41 chr2 55233721 55234143 -195453711 + L1MA4A LINE L1 2 421 -6584 951 113 0 60 chr2 55234143 55234294 -195453560 - AluSg/x SINE Alu -68 242 101 11642 199 45 41 chr2 55234294 55238849 -195449005 + L1MA4A LINE L1 421 6474 -531 852 241 37 0 chr2 55238845 55239086 -195448768 + L1PB3 LINE L1 4257 4506 -1640 * 5453 145 41 4 chr2 55239079 55240338 -195447516 + L1PB3 LINE L1 4849 6151 -3 2680 154 21 9 chr2 55240342 55240876 -195446978 + L1MA4A LINE L1 6464 7003 -2 26 0 0 0 chr2 55241241 55241267 -195446587 + AT_rich Low_complexity Low_complexity 1 26 0 187 53 26 26 chr2 55241274 55241312 -195446542 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 917 189 0 0 chr2 55241327 55241470 -195446384 - FRAM SINE Alu -36 140 1 192 163 0 0 chr2 55241739 55241782 -195446072 + CT-rich Low_complexity Low_complexity 2 44 0 510 184 105 40 chr2 55242253 55242405 -195445449 + MLT1H LTR MaLR 7 168 -381 1152 115 29 24 chr2 55242405 55242614 -195445240 - L1P LINE L1 -913 5233 5024 234 322 135 43 chr2 55242901 55243131 -195444723 + MIR SINE MIR 11 261 -1 603 136 40 34 chr2 55243998 55244149 -195443705 + CT-rich Low_complexity Low_complexity 1 155 -23 1864 149 30 0 chr2 55244149 55244450 -195443404 - AluSx SINE Alu -2 310 1 603 136 40 34 chr2 55244450 55244475 -195443379 + CT-rich Low_complexity Low_complexity 155 178 0 180 244 0 0 chr2 55246211 55246252 -195441602 + MIR SINE MIR 114 154 -108 475 154 7 44 chr2 55246803 55246939 -195440915 + GA-rich Low_complexity Low_complexity 2 132 0 182 375 18 0 chr2 55247918 55247974 -195439880 - MIR SINE MIR -136 72 16 1591 223 34 25 chr2 55248162 55248598 -195439256 + L1MA7 LINE L1 5852 6291 0 420 300 139 0 chr2 55249234 55249457 -195438397 - HAL1 LINE L1 -634 1873 1620 713 296 89 41 chr2 55249559 55250042 -195437812 - HAL1 LINE L1 -1341 1166 661 616 282 108 5 chr2 55250048 55250261 -195437593 - MIR SINE MIR 0 262 28 820 310 114 38 chr2 55250317 55250768 -195437086 - HAL1 LINE L1 -1910 597 95 2308 95 3 0 chr2 55250768 55251072 -195436782 - AluSq SINE Alu -8 305 1 820 310 114 38 chr2 55251072 55251172 -195436682 - HAL1 LINE L1 -2412 95 4 902 203 27 5 chr2 55251425 55251612 -195436242 + MER20 DNA MER1_type 17 207 -12 521 251 167 8 chr2 55253131 55253293 -195434561 + MIR SINE MIR 3 188 -74 823 180 85 15 chr2 55253709 55253909 -195433945 + ORSL DNA AcHobo 62 275 0 631 236 42 12 chr2 55253909 55254074 -195433780 - MLT1G1 LTR MaLR -423 172 3 183 139 0 0 chr2 55254611 55254647 -195433207 + (TC)n Simple_repeat Simple_repeat 1 36 0 752 285 68 40 chr2 55255360 55255609 -195432245 - MIR SINE MIR -1 261 6 1832 155 35 92 chr2 55255860 55256318 -195431536 - MSTB1 LTR MaLR 0 432 1 1094 99 0 0 chr2 55257242 55257394 -195430460 - AluSg/x SINE Alu 0 310 159 953 258 84 30 chr2 55257706 55258040 -195429814 + MER74A LTR ERVL 11 362 -196 2600 113 3 3 chr2 55258536 55258900 -195428954 - THE1B LTR MaLR 0 364 1 24 0 0 0 chr2 55258953 55258977 -195428877 + AT_rich Low_complexity Low_complexity 1 24 0 22 70 0 0 chr2 55261815 55261858 -195425996 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 55261907 55261928 -195425926 + AT_rich Low_complexity Low_complexity 1 21 0 449 236 108 19 chr2 55262171 55262328 -195425526 + L2 LINE L2 3138 3308 -5 648 232 32 12 chr2 55263215 55263379 -195424475 - MLT1E LTR MaLR -386 181 12 279 320 136 11 chr2 55263906 55264057 -195423797 - MIR SINE MIR -26 182 13 202 232 58 43 chr2 55264247 55264316 -195423538 - MIR SINE MIR -115 147 78 430 301 69 6 chr2 55265839 55266012 -195421842 + MIR SINE MIR 63 246 -16 2194 130 0 0 chr2 55266022 55266323 -195421531 - AluSx SINE Alu -11 301 1 357 317 25 25 chr2 55266999 55267119 -195420735 + MIR3 SINE MIR 61 180 -28 10057 30 0 0 chr2 55267668 55269665 -195418189 + L1PA3 LINE L1 4190 6186 0 256 341 40 16 chr2 55269979 55270105 -195417749 + MIR SINE MIR 21 149 -113 220 296 49 49 chr2 55270896 55270977 -195416877 - MER5B DNA MER1_type -96 82 2 231 256 0 51 chr2 55271677 55271755 -195416099 + HAL1 LINE L1 799 872 -1635 499 278 146 34 chr2 55272079 55272428 -195415426 + HAL1 LINE L1 1230 1617 -890 294 268 177 67 chr2 55272480 55272916 -195414938 + HAL1 LINE L1 1814 2297 -210 1774 229 56 67 chr2 55273354 55273521 -195414333 - L1MC4a LINE L1 -3 7805 7638 3466 183 6 42 chr2 55273521 55273800 -195414054 + LTR51 LTR ERV1 1 289 -382 1781 159 17 14 chr2 55273800 55273962 -195413892 - AluSx SINE Alu -16 296 131 2044 115 43 0 chr2 55273962 55274241 -195413613 - AluSg SINE Alu -19 291 1 1781 159 17 14 chr2 55274241 55274373 -195413481 - AluSx SINE Alu -181 131 1 3466 183 6 42 chr2 55274373 55274789 -195413065 + LTR51 LTR ERV1 289 671 0 1774 229 56 67 chr2 55274789 55275232 -195412622 - L1MC4a LINE L1 -170 7638 7202 180 0 0 0 chr2 55276826 55276846 -195411008 + (TTG)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr2 55277375 55277396 -195410458 + AT_rich Low_complexity Low_complexity 1 21 0 260 254 0 17 chr2 55277675 55277734 -195410120 + MIR SINE MIR 89 146 -62 194 290 94 78 chr2 55278067 55278312 -195409542 + L2 LINE L2 2816 3064 -208 191 427 19 0 chr2 55278575 55278678 -195409176 + L2 LINE L2 3143 3247 -25 617 261 82 29 chr2 55280127 55280334 -195407520 + MIR SINE MIR 21 238 -24 359 325 175 21 chr2 55280615 55280809 -195407045 - MIR SINE MIR -6 256 33 320 303 49 19 chr2 55280962 55281263 -195406591 - L1MEd LINE L1 -4910 1209 1031 334 260 202 6 chr2 55281264 55281413 -195406441 - MER5A DNA MER1_type -1 188 6 256 269 57 43 chr2 55281419 55281560 -195406294 - L1MEd LINE L1 -5082 1037 895 5034 130 14 8 chr2 55281573 55282421 -195405433 - L1PA16 LINE L1 -104 6062 5211 670 107 58 0 chr2 55282849 55282952 -195404902 - HSMAR2 DNA Mariner -55 1247 1139 1687 5 0 0 chr2 55283617 55283801 -195404053 - AluYa5 SINE Alu -2 309 126 28 0 0 0 chr2 55284065 55284093 -195403761 + AT_rich Low_complexity Low_complexity 1 28 0 2953 20 17 3 chr2 55284120 55284471 -195403383 - L1PA4 LINE L1 -2 6153 5798 189 0 0 0 chr2 55285240 55285261 -195402593 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 200 360 45 11 chr2 55285321 55285410 -195402444 - MER5A DNA MER1_type -28 161 70 235 358 84 0 chr2 55286151 55286246 -195401608 + MIR3 SINE MIR 89 191 -17 1390 264 47 27 chr2 55286314 55286764 -195401090 - MER74B LTR ERVL -74 548 90 607 318 38 50 chr2 55288619 55288880 -195398974 - MIR SINE MIR -4 258 1 567 308 97 0 chr2 55290782 55290977 -195396877 - MIR SINE MIR -33 229 16 478 298 15 0 chr2 55290977 55291108 -195396746 + MER94 DNA DNA 2 134 0 843 210 37 23 chr2 55292327 55292541 -195395313 + L1M4 LINE L1 302 518 -5762 2174 238 99 6 chr2 55292855 55293706 -195394148 + L1M4 LINE L1 2307 3221 -3161 2191 146 40 3 chr2 55297886 55298235 -195389619 + THE1B LTR MaLR 1 362 -2 9861 132 7 42 chr2 55298237 55299874 -195387980 + THE1B-int LTR MaLR 1 1579 -1 2368 138 8 3 chr2 55299874 55300236 -195387618 + THE1B LTR MaLR 1 364 0 27 49 0 0 chr2 55301336 55301377 -195386477 + AT_rich Low_complexity Low_complexity 1 41 0 181 320 94 62 chr2 55301504 55301632 -195386222 + MIR SINE MIR 7 138 -124 1575 158 146 44 chr2 55301637 55302022 -195385832 + MSTA LTR MaLR 5 428 0 1242 209 97 31 chr2 55302318 55302638 -195385216 - MER2 DNA MER2_type 0 344 4 981 271 67 55 chr2 55303209 55303704 -195384150 + MLT1D LTR MaLR 5 505 0 2609 92 5 3 chr2 55304611 55304980 -195382874 - L1PA13 LINE L1 -12 6151 5782 228 154 31 46 chr2 55304980 55305045 -195382809 + (TA)n Simple_repeat Simple_repeat 1 64 0 235 219 0 14 chr2 55305050 55305123 -195382731 + LTR66 LTR ERVL 377 448 -162 3412 94 14 10 chr2 55305123 55305632 -195382222 - L1P4 LINE L1 -395 5768 5258 285 29 0 0 chr2 55305772 55305806 -195382048 + (CA)n Simple_repeat Simple_repeat 2 35 0 689 313 96 37 chr2 55305983 55306588 -195381266 + L2 LINE L2 2670 3312 -1 212 0 36 0 chr2 55306859 55306887 -195380967 + (TTA)n Simple_repeat Simple_repeat 1 29 0 2114 97 10 3 chr2 55310253 55310543 -195377311 + AluSx SINE Alu 1 292 -20 44 75 0 0 chr2 55310842 55310935 -195376919 + AT_rich Low_complexity Low_complexity 1 93 0 222 350 115 38 chr2 55312275 55312432 -195375422 - L2 LINE L2 -2 3270 3102 25 51 0 0 chr2 55312687 55312726 -195375128 + AT_rich Low_complexity Low_complexity 1 39 0 7203 44 6 0 chr2 55313148 55314238 -195373616 + L1PA4 LINE L1 5054 6148 -7 24 0 0 0 chr2 55314238 55314262 -195373592 + AT_rich Low_complexity Low_complexity 1 24 0 772 274 43 35 chr2 55314620 55314850 -195373004 + MIR SINE MIR 3 234 -28 594 363 51 27 chr2 55314884 55314950 -195372904 + ERVL LTR ERVL 3355 3418 -2346 1775 115 112 19 chr2 55314950 55315000 -195372854 - MER61A LTR ERV1 0 343 299 1884 161 0 0 chr2 55315000 55315279 -195372575 + AluSq SINE Alu 7 285 -28 1775 115 112 19 chr2 55315279 55315542 -195372312 - MER61A LTR ERV1 -44 299 1 594 363 51 27 chr2 55315542 55315850 -195372004 + ERVL LTR ERVL 3418 3738 -2026 306 302 48 42 chr2 55315881 55316070 -195371784 + ERVL LTR ERVL 3872 4061 -1593 733 335 88 7 chr2 55316350 55316657 -195371197 + ERVL LTR ERVL 4384 4715 -1049 536 250 21 7 chr2 55316864 55317008 -195370846 + MER103 DNA DNA 20 165 -1 422 133 27 13 chr2 55317185 55317260 -195370594 + AluSg/x SINE Alu 219 294 -16 229 318 0 0 chr2 55318739 55318802 -195369052 + (TA)n Simple_repeat Simple_repeat 1 63 0 245 172 0 78 chr2 55318845 55318909 -195368945 - L1MCa LINE L1 -4362 2064 2006 4541 151 13 22 chr2 55319143 55319993 -195367861 + L1PA15 LINE L1 519 1409 -4734 14856 195 11 22 chr2 55320113 55321368 -195366486 + L1P LINE L1 620 1888 -4258 1904 140 63 0 chr2 55321368 55321654 -195366200 - AluY SINE Alu -7 304 1 14856 195 11 22 chr2 55321654 55323636 -195364218 + L1P LINE L1 1888 3819 -2327 11042 189 55 60 chr2 55323636 55325068 -195362786 + L1PA15 LINE L1 2285 3723 -2757 795 174 29 106 chr2 55325068 55325275 -195362579 + AluJo SINE Alu 115 305 -7 11042 189 55 60 chr2 55325275 55326372 -195361482 + L1PA15 LINE L1 3723 4825 -1655 1903 133 28 0 chr2 55326372 55326657 -195361197 + AluSx SINE Alu 5 297 -15 11042 189 55 60 chr2 55326657 55328140 -195359714 + L1PA15 LINE L1 4825 6476 -4 2396 57 0 7 chr2 55328142 55328438 -195359416 + AluY SINE Alu 1 294 -17 191 318 91 0 chr2 55328988 55329054 -195358800 + L2 LINE L2 3143 3214 -58 282 294 90 136 chr2 55329478 55330563 -195357291 - L2 LINE L2 -454 2860 1825 306 0 0 0 chr2 55330634 55330668 -195357186 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 420 364 34 14 chr2 55332374 55332583 -195355271 - MIR SINE MIR -1 261 49 1094 328 106 14 chr2 55332800 55333300 -195354554 + MLT1G1 LTR MaLR 50 595 0 621 234 139 13 chr2 55333465 55333623 -195354231 + MER5A DNA MER1_type 9 186 -3 24 0 0 0 chr2 55334103 55334127 -195353727 + AT_rich Low_complexity Low_complexity 1 24 0 577 228 32 13 chr2 55334797 55334955 -195352899 + MER3 DNA MER1_type 9 122 -87 1803 207 22 3 chr2 55336275 55336633 -195351221 + MLT1A1 LTR MaLR 1 365 0 317 333 57 0 chr2 55337880 55338003 -195349851 + MIR SINE MIR 23 152 -110 979 146 192 0 chr2 55338195 55338435 -195349419 - L1MA8 LINE L1 0 6291 6006 1012 217 109 45 chr2 55338880 55339239 -195348615 - L1ME2 LINE L1 -23 6210 5829 731 172 104 0 chr2 55339268 55339402 -195348452 - MLT2B1 LTR ERVL 0 520 373 1014 142 0 18 chr2 55339407 55339567 -195348287 + MLT1A1 LTR MaLR 1 159 -206 1950 127 28 3 chr2 55339567 55339850 -195348004 + AluSc SINE Alu 1 290 -19 1108 212 31 0 chr2 55339899 55340125 -195347729 + MLT1A1 LTR MaLR 133 365 0 1393 205 92 35 chr2 55340143 55340490 -195347364 - MLT2B1 LTR ERVL -153 367 1 4656 258 69 65 chr2 55340581 55340997 -195346857 - L1ME2 LINE L1 -690 5549 5136 345 109 0 0 chr2 55340997 55341061 -195346793 + (TA)n Simple_repeat Simple_repeat 2 65 0 4656 258 69 65 chr2 55341061 55342868 -195344986 - L1ME2 LINE L1 -1103 5136 3353 2215 82 0 3 chr2 55342868 55343161 -195344693 - AluY SINE Alu -19 292 1 4656 258 69 65 chr2 55343161 55344483 -195343371 - L1ME2 LINE L1 -2886 3353 2038 337 296 35 35 chr2 55344709 55344851 -195343003 - L1ME2 LINE L1 -5923 282 141 770 214 25 92 chr2 55345994 55346184 -195341670 - MLT1B LTR MaLR -166 224 52 1487 199 135 26 chr2 55346184 55346570 -195341284 - MSTA LTR MaLR 0 428 1 770 214 25 92 chr2 55346570 55346617 -195341237 - MLT1B LTR MaLR -338 52 3 566 270 88 109 chr2 55346892 55347458 -195340396 + LTR67 LTR ERVL 1 554 -3 1324 159 53 5 chr2 55347555 55347820 -195340034 - L1MA7 LINE L1 -268 5893 5623 1726 171 34 23 chr2 55347820 55348205 -195339649 + L1MA7 LINE L1 5899 6288 -3 26 83 0 28 chr2 55348205 55348313 -195339541 + AT_rich Low_complexity Low_complexity 1 105 0 1444 277 44 47 chr2 55348541 55349145 -195338709 + MER69 DNA AcHobo 126 778 -1748 446 224 144 22 chr2 55349177 55349454 -195338400 + MER69 DNA AcHobo 2024 2334 -192 2356 261 34 35 chr2 55349513 55350046 -195337808 - L1ME1 LINE L1 -65 6101 5563 2309 87 0 3 chr2 55350046 55350346 -195337508 - AluY SINE Alu -12 299 1 2356 261 34 35 chr2 55350346 55350702 -195337152 - L1ME1 LINE L1 -603 5563 5208 350 347 76 30 chr2 55351329 55351735 -195336119 - MERVL LTR ERVL -2553 2932 2508 5033 150 3 2 chr2 55351774 55352627 -195335227 + L1P LINE L1 4208 5061 -1085 757 132 0 0 chr2 55352627 55352748 -195335106 + L1P LINE L1 4928 5048 -1098 5923 97 25 6 chr2 55352750 55353964 -195333890 + L1PA10 LINE L1 4917 6152 -16 1125 299 22 23 chr2 55353979 55354432 -195333422 - MERVL LTR ERVL -2514 2482 1982 612 322 25 20 chr2 55355014 55355025 -195332829 - MIR SINE MIR -16 246 237 2115 106 34 0 chr2 55355025 55355318 -195332536 + AluSx SINE Alu 1 303 -9 612 322 25 20 chr2 55355318 55355551 -195332303 - MIR SINE MIR -25 237 1 3260 202 14 17 chr2 55355805 55356459 -195331395 - MER82 DNA MER2_type -1 652 1 1610 209 104 5 chr2 55356532 55356906 -195330948 + LTR52 LTR ERVL 1 411 -10 318 289 100 62 chr2 55358439 55358730 -195329124 + MLT1L LTR MaLR 156 457 -158 21 57 0 0 chr2 55359155 55359190 -195328664 + AT_rich Low_complexity Low_complexity 1 35 0 696 255 75 28 chr2 55359890 55360102 -195327752 - MIR SINE MIR -38 224 3 227 258 155 0 chr2 55360275 55360372 -195327482 + MLT1J LTR MaLR 40 151 -360 216 402 9 0 chr2 55361726 55361833 -195326021 + MIR SINE MIR 74 181 -81 223 359 15 23 chr2 55362751 55362882 -195324972 + MIR3 SINE MIR 30 159 -49 300 264 71 80 chr2 55363024 55363084 -195324770 + L1MC/D LINE L1 5338 5397 -773 2490 52 0 10 chr2 55363084 55363390 -195324464 + AluY SINE Alu 1 303 -8 300 264 71 80 chr2 55363390 55363541 -195324313 + L1MC/D LINE L1 5397 5547 -623 533 105 35 23 chr2 55363558 55363644 -195324210 - THE1C LTR MaLR -288 87 1 21 57 0 0 chr2 55363869 55363904 -195323950 + AT_rich Low_complexity Low_complexity 1 35 0 688 249 39 11 chr2 55364538 55364719 -195323135 + LTR41 LTR ERVL 5 190 -583 494 239 33 99 chr2 55364886 55365158 -195322696 + LTR41 LTR ERVL 451 704 -69 2739 208 32 27 chr2 55365174 55365839 -195322015 - L1MB7 LINE L1 -18 6166 5499 3009 272 78 11 chr2 55365840 55367402 -195320452 - L1MB7 LINE L1 -2153 3993 2254 * 4804 228 10 10 chr2 55367377 55368586 -195319268 - L1 LINE L1 -1459 4687 3479 341 239 39 5 chr2 55368581 55368712 -195319142 + L1M4 LINE L1 3694 3831 -2315 * 4118 208 40 23 chr2 55368713 55369643 -195318211 - L1PA15-16 LINE L1 -5015 1834 846 2975 229 70 61 chr2 55369641 55371640 -195316214 - L1M4c LINE L1 -4055 2770 587 * 330 312 57 0 chr2 55371639 55371780 -195316074 - L1M4c LINE L1 -6391 151 3 * 21 57 0 0 chr2 55372987 55373022 -195314832 + AT_rich Low_complexity Low_complexity 1 35 0 530 369 72 12 chr2 55379850 55380251 -195307603 - L2 LINE L2 -47 3266 2842 462 318 102 25 chr2 55380290 55380564 -195307290 - L2 LINE L2 -590 2724 2430 639 331 126 39 chr2 55380616 55381178 -195306676 - L2 LINE L2 -2568 746 136 31 26 0 0 chr2 55381191 55381229 -195306625 + AT_rich Low_complexity Low_complexity 1 38 0 279 277 40 30 chr2 55382869 55382970 -195304884 - MER94 DNA DNA -23 111 10 342 319 52 15 chr2 55383239 55383374 -195304480 + MIR SINE MIR 12 151 -111 2046 256 55 8 chr2 55385075 55385696 -195302158 - L1ME3A LINE L1 -16 6154 5505 704 222 33 0 chr2 55385721 55385874 -195301980 - L1MC1 LINE L1 0 6333 6176 472 246 54 26 chr2 55385864 55386138 -195301716 - L1ME3A LINE L1 -663 5499 5217 * 22 0 0 0 chr2 55386287 55386309 -195301545 + AT_rich Low_complexity Low_complexity 1 22 0 961 81 0 0 chr2 55386711 55386847 -195301007 - AluSp/q SINE Alu -4 309 174 1027 296 42 84 chr2 55387337 55387556 -195300298 + MER115 DNA AcHobo 121 348 -345 595 166 191 0 chr2 55387556 55387713 -195300141 - MER53 DNA DNA -1 188 2 1027 296 42 84 chr2 55387713 55388090 -195299764 + MER115 DNA AcHobo 348 692 -1 550 239 55 5 chr2 55388348 55388516 -195299338 + MIR SINE MIR 86 262 0 2222 89 7 0 chr2 55388942 55389235 -195298619 - AluY SINE Alu -15 296 2 1427 201 102 39 chr2 55389863 55390302 -195297552 - MLT1C LTR MaLR 0 467 1 247 266 0 0 chr2 55390390 55390454 -195297400 - L2 LINE L2 -4 3268 3205 412 278 196 61 chr2 55390471 55390899 -195296955 - MLT1J LTR MaLR 0 511 26 2141 193 37 37 chr2 55390965 55391451 -195296403 - MLT1D LTR MaLR 0 505 20 624 297 59 14 chr2 55393260 55393482 -195294372 + MIR SINE MIR 18 249 -13 417 137 0 0 chr2 55394637 55394710 -195293144 - AluSx SINE Alu -2 310 238 1299 119 6 0 chr2 55394711 55394887 -195292967 - AluSx SINE Alu -124 188 12 477 252 49 0 chr2 55395021 55395144 -195292710 - MER94 DNA DNA -5 129 1 24 32 0 0 chr2 55395710 55395741 -195292113 + AT_rich Low_complexity Low_complexity 1 31 0 281 143 0 32 chr2 55395803 55395866 -195291988 + (GGGA)n Simple_repeat Simple_repeat 1 61 0 21 36 0 0 chr2 55396137 55396165 -195291689 + AT_rich Low_complexity Low_complexity 1 28 0 2693 250 64 58 chr2 55396364 55396611 -195291243 - L1ME1 LINE L1 -5 6161 5917 3391 25 0 0 chr2 55396611 55397008 -195290846 - L1PA2 LINE L1 0 6155 5759 2693 250 64 58 chr2 55397008 55398615 -195289239 - L1ME1 LINE L1 -249 5917 4314 671 288 130 78 chr2 55398703 55399140 -195288714 + MLT1E LTR MaLR 106 591 -2 1183 277 148 29 chr2 55399150 55399471 -195288383 - L1ME1 LINE L1 -1832 4314 4033 422 243 0 0 chr2 55399471 55399574 -195288280 - L1PB4 LINE L1 0 6156 6054 1183 277 148 29 chr2 55399574 55399988 -195287866 - L1ME1 LINE L1 -2113 4033 3491 2382 233 18 32 chr2 55399988 55400899 -195286955 - L1MB8 LINE L1 -6 6241 5049 * 24975 153 15 19 chr2 55400890 55406620 -195281234 - L1PA8 LINE L1 0 6487 771 2346 206 4 15 chr2 55406609 55407132 -195280722 - L1PA8 LINE L1 -5357 518 2 * 323 239 0 0 chr2 55407132 55407203 -195280651 - L1MB8 LINE L1 -1144 5071 5001 * 422 253 41 27 chr2 55407200 55407346 -195280508 - L1MB8 LINE L1 -3326 2889 2742 1972 161 45 29 chr2 55407354 55407775 -195280079 - L1MCa LINE L1 -5221 1205 778 1002 203 92 5 chr2 55407775 55407992 -195279862 - L1MCa LINE L1 -6170 256 21 * 1171 254 61 54 chr2 55407991 55408554 -195279300 - L1MB8 LINE L1 -3655 2560 2025 2009 70 51 0 chr2 55408554 55408838 -195279016 - AluY SINE Alu 0 310 14 1171 254 61 54 chr2 55408838 55409069 -195278785 - L1MB8 LINE L1 -4190 2025 1797 491 127 0 0 chr2 55409069 55409140 -195278714 - AluS SINE Alu -242 71 1 5929 155 24 24 chr2 55409371 55411024 -195276830 + L1MA5A LINE L1 4631 6287 -10 234 0 0 0 chr2 55412165 55412191 -195275663 + (A)n Simple_repeat Simple_repeat 1 26 0 2524 181 15 6 chr2 55412331 55412811 -195275043 + L1PA16 LINE L1 5683 6166 0 911 234 97 16 chr2 55413145 55413453 -195274401 + MER46C DNA MER2_type 5 337 -1 430 234 200 7 chr2 55414842 55414987 -195272867 + MER5A DNA MER1_type 17 189 0 229 325 38 38 chr2 55416370 55416530 -195271324 + L1MC3 LINE L1 6690 6849 -936 513 297 48 6 chr2 55417992 55418157 -195269697 - MIR3 SINE MIR -6 202 31 279 0 0 0 chr2 55418700 55418731 -195269123 + (TG)n Simple_repeat Simple_repeat 2 32 0 549 196 0 19 chr2 55418739 55418846 -195269008 + Tigger3(Golem) DNA MER2_type 4 108 -2921 * 4255 142 23 15 chr2 55418837 55419582 -195268272 + Tigger3(Golem) DNA MER2_type 2277 3027 -2 1541 160 89 49 chr2 55419744 55420015 -195267839 - Charlie1 DNA MER1_type -1 2760 2501 2017 136 7 7 chr2 55420015 55420324 -195267530 - AluSx SINE Alu -3 309 1 1541 160 89 49 chr2 55420324 55420543 -195267311 - Charlie1 DNA MER1_type -260 2501 1 312 91 0 0 chr2 55421376 55421420 -195266434 + (CA)n Simple_repeat Simple_repeat 1 44 0 287 154 121 44 chr2 55422551 55422642 -195265212 - MER53 DNA DNA -3 186 89 478 294 72 51 chr2 55422967 55423243 -195264611 - LTR67 LTR ERVL -1 556 275 2165 125 3 0 chr2 55423316 55423620 -195264234 - AluSx SINE Alu -7 305 1 317 260 78 47 chr2 55423625 55423883 -195263971 - L1M4 LINE L1 -2616 3530 3265 2131 108 0 3 chr2 55423885 55424171 -195263683 - AluSc SINE Alu -12 297 13 316 391 24 33 chr2 55424179 55424391 -195263463 - LTR67 LTR ERVL -341 216 7 2219 149 9 70 chr2 55424399 55424811 -195263043 + MSTA LTR MaLR 1 384 -44 2044 134 10 0 chr2 55424811 55425116 -195262738 - AluSg SINE Alu 0 310 3 2219 149 9 70 chr2 55425116 55425159 -195262695 + MSTA LTR MaLR 384 428 0 1656 191 3 3 chr2 55425410 55425714 -195262140 + AluJo SINE Alu 2 305 -7 249 57 0 0 chr2 55425721 55425756 -195262098 + (CAAAAA)n Simple_repeat Simple_repeat 1 35 0 3243 147 5 38 chr2 55427050 55427608 -195260246 + L1PB3 LINE L1 5608 6147 -7 182 269 19 19 chr2 55429253 55429305 -195258549 - MIR SINE MIR -10 252 201 220 193 35 0 chr2 55429408 55429465 -195258389 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 262 296 45 11 chr2 55430334 55430422 -195257432 + L2 LINE L2 3182 3272 0 999 321 49 55 chr2 55431920 55432835 -195255019 - L2 LINE L2 -3 3310 2395 234 359 62 54 chr2 55433009 55433285 -195254569 + L2 LINE L2 2427 2704 -610 618 118 0 0 chr2 55433485 55433587 -195254267 + (TA)n Simple_repeat Simple_repeat 2 103 0 254 244 33 56 chr2 55436161 55436251 -195251603 + MIR SINE MIR 64 151 -111 260 218 18 0 chr2 55436488 55436543 -195251311 - MER5B DNA MER1_type -4 174 119 333 233 14 103 chr2 55439699 55439845 -195248009 - MER94 DNA DNA -1 133 1 381 352 65 14 chr2 55441372 55441588 -195246266 + MIR SINE MIR 2 228 -34 258 340 77 31 chr2 55441843 55442037 -195245817 + L2 LINE L2 2554 2756 -558 732 124 0 0 chr2 55442087 55442192 -195245662 - AluSx SINE Alu -14 298 194 1025 128 0 0 chr2 55442193 55442334 -195245520 - AluSx SINE Alu -171 141 1 294 173 0 0 chr2 55443136 55443188 -195244666 - L2 LINE L2 0 3313 3262 941 229 33 14 chr2 55443595 55443809 -195244045 + MER58A DNA MER1_type 1 218 -6 1493 161 4 4 chr2 55443907 55444162 -195243692 - L1MA4A LINE L1 -266 6739 6485 198 167 0 0 chr2 55444165 55444201 -195243653 + (TA)n Simple_repeat Simple_repeat 1 36 0 238 235 24 12 chr2 55444202 55444287 -195243567 - L1MC4 LINE L1 -1340 6702 6617 216 0 0 0 chr2 55444287 55444311 -195243543 + (CA)n Simple_repeat Simple_repeat 1 24 0 9221 208 27 9 chr2 55444311 55446617 -195241237 - L1MA4A LINE L1 -526 6479 3191 * 10762 229 70 24 chr2 55446614 55449352 -195238502 - L1MA4A LINE L1 -3982 2867 3 953 202 61 14 chr2 55450606 55450819 -195237035 + MER58A DNA MER1_type 2 224 0 393 333 56 7 chr2 55450819 55450963 -195236891 - MIR SINE MIR -59 203 53 237 339 0 0 chr2 55451007 55451069 -195236785 + MIR SINE MIR 86 147 -61 230 214 0 18 chr2 55451519 55451575 -195236279 + LTR33A LTR ERVL 3 57 -466 2127 223 11 23 chr2 55452657 55453188 -195234666 + LTR27 LTR ERV1 3 1233 -140 685 184 7 35 chr2 55453226 55453367 -195234487 + LTR27 LTR ERV1 498 634 -2 283 194 15 15 chr2 55454079 55454146 -195233708 + L1MC5 LINE L1 7841 7907 -54 9220 191 13 13 chr2 55454673 55457302 -195230552 + L1PA13 LINE L1 3499 6152 -11 300 292 39 58 chr2 55458688 55458842 -195229012 + L2 LINE L2 2696 2846 -468 234 0 0 0 chr2 55459163 55459189 -195228665 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 513 71 0 0 chr2 55460332 55460402 -195227452 + (TTTC)n Simple_repeat Simple_repeat 4 73 0 5599 112 5 0 chr2 55460704 55461524 -195226330 - L1PA7 LINE L1 -832 5314 4491 6616 62 2 3 chr2 55461524 55462382 -195225472 + L1PA7 LINE L1 5297 6153 -1 1593 277 67 9 chr2 55462534 55463172 -195224682 + L1ME1 LINE L1 683 1357 -5039 1819 255 50 26 chr2 55463183 55463992 -195223862 + L1PBa LINE L1 1526 2295 -3920 482 229 0 0 chr2 55463999 55464104 -195223750 + L1ME1 LINE L1 2514 2618 -3597 * 1890 236 81 17 chr2 55464102 55464867 -195222987 + L1ME1 LINE L1 5111 5921 -314 22 35 0 0 chr2 55465492 55465521 -195222333 + AT_rich Low_complexity Low_complexity 1 29 0 202 279 35 35 chr2 55466000 55466086 -195221768 - MIR SINE MIR -2 260 175 1783 139 62 23 chr2 55467024 55467377 -195220477 - L1MA5 LINE L1 0 6300 5934 440 181 0 0 chr2 55467378 55467450 -195220404 + L1MA5 LINE L1 5857 5928 -372 586 295 64 99 chr2 55470856 55471662 -195216192 + L2 LINE L2 2509 3309 -4 187 375 12 0 chr2 55473180 55473260 -195214594 - L3 LINE CR1 -2 1575 1495 681 233 0 0 chr2 55473270 55473401 -195214453 + MLT1A1 LTR MaLR 1 131 -234 360 208 42 0 chr2 55473401 55473473 -195214381 + MER6 DNA MER2_type -1 794 -71 281 185 74 0 chr2 55473467 55473521 -195214333 + MER6 DNA MER2_type 127 184 -681 * 1582 150 11 0 chr2 55473531 55473797 -195214057 + MER6 DNA MER2_type 597 865 0 855 260 62 31 chr2 55473797 55474024 -195213830 + MLT1A1 LTR MaLR 132 365 0 570 290 70 72 chr2 55474032 55474377 -195213477 - L3 LINE CR1 -100 1477 1134 540 261 95 42 chr2 55475699 55475940 -195211914 - Charlie7 DNA MER1_type -2093 519 266 182 293 120 13 chr2 55475941 55476016 -195211838 - MER5A DNA MER1_type -98 91 9 12902 27 0 0 chr2 55476057 55478373 -195209481 + L1PA3 LINE L1 3848 6162 0 479 243 168 29 chr2 55479006 55479179 -195208675 + MLT1H1 LTR MaLR 327 523 -32 285 243 0 43 chr2 55479320 55479390 -195208464 + Tigger5 DNA MER2_type 1 67 -2256 471 169 13 0 chr2 55479453 55479530 -195208324 + Tigger5 DNA MER2_type 2245 2322 -1 238 283 0 22 chr2 55479535 55479627 -195208227 - L1MC4 LINE L1 -1339 6703 6614 239 284 23 0 chr2 55479665 55479753 -195208101 + L1MC4 LINE L1 6614 6703 -1339 * 268 241 0 46 chr2 55479723 55479810 -195208044 - L1MC4 LINE L1 -1339 6703 6621 487 378 0 0 chr2 55479812 55479992 -195207862 + (TA)n Simple_repeat Simple_repeat 1 180 0 301 277 48 0 chr2 55479995 55480078 -195207776 - L1MC4 LINE L1 -1339 6703 6617 392 219 40 7 chr2 55480089 55480240 -195207614 + (CATA)n Simple_repeat Simple_repeat 4 159 0 243 233 58 0 chr2 55480242 55480328 -195207526 - L1MC4 LINE L1 -1339 6703 6613 263 140 20 0 chr2 55480343 55480393 -195207461 + (TA)n Simple_repeat Simple_repeat 1 51 0 375 283 0 9 chr2 55480685 55480798 -195207056 - L1 LINE L1 -1198 4948 4837 1181 166 51 9 chr2 55481208 55481425 -195206429 + L1PA15 LINE L1 5934 6159 -6 2169 220 39 4 chr2 55481765 55482302 -195205552 + L1MB2 LINE L1 4061 4616 -1530 4373 182 21 44 chr2 55482322 55482812 -195205042 + L1MB2 LINE L1 4757 5257 -914 2060 157 8 22 chr2 55482812 55483181 -195204673 - THE1B LTR MaLR 0 364 1 11080 105 10 0 chr2 55483181 55484746 -195203108 - THE1B-int LTR MaLR 0 1580 1 2298 135 5 22 chr2 55484746 55485116 -195202738 - THE1B LTR MaLR 0 364 1 4373 182 21 44 chr2 55485116 55486064 -195201790 + L1MB2 LINE L1 5254 6169 -2 351 0 0 0 chr2 55486387 55486426 -195201428 + (CA)n Simple_repeat Simple_repeat 2 40 0 536 276 122 58 chr2 55487099 55487666 -195200188 + MLT2F LTR ERVL 28 660 -3 252 261 127 37 chr2 55488193 55488327 -195199527 - MIR SINE MIR -6 256 111 27 29 0 0 chr2 55489018 55489052 -195198802 + AT_rich Low_complexity Low_complexity 1 34 0 374 136 0 31 chr2 55492012 55492096 -195195758 + L1MA9 LINE L1 5843 5920 -382 2361 179 97 138 chr2 55492144 55493063 -195194791 + MER21A LTR ERV1 32 912 -19 13314 146 44 9 chr2 55493077 55495383 -195192471 + Tigger1 DNA MER2_type 33 2418 0 1897 146 74 26 chr2 55495383 55495760 -195192094 + L1MA9 LINE L1 5918 6312 0 395 321 115 36 chr2 55496248 55496693 -195191161 + L1MEd LINE L1 829 1183 -1379 502 311 75 40 chr2 55496943 55497028 -195190826 - MLT1J1 LTR MaLR -2 444 363 981 196 30 126 chr2 55497028 55497432 -195190422 + MLT1A1 LTR MaLR 1 365 0 502 311 75 40 chr2 55497432 55497693 -195190161 - MLT1J1 LTR MaLR -83 363 86 203 171 0 0 chr2 55497759 55497796 -195190058 + (TTG)n Simple_repeat Simple_repeat 1 37 0 6381 98 11 1 chr2 55497839 55498985 -195188869 - L1PA13 LINE L1 -20 6143 4989 967 150 0 0 chr2 55498982 55499142 -195188712 + L1P LINE L1 4784 4943 -1203 * 21 0 0 0 chr2 55499292 55499313 -195188541 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 55499409 55499432 -195188422 + AT_rich Low_complexity Low_complexity 1 23 0 288 324 152 10 chr2 55500035 55500239 -195187615 - MIR SINE MIR -10 252 20 878 222 60 0 chr2 55500352 55500618 -195187236 + MER33 DNA MER1_type 43 324 0 344 220 7 135 chr2 55500711 55500852 -195187002 - L2 LINE L2 0 3313 3191 21 0 0 0 chr2 55501158 55501179 -195186675 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 55501593 55501613 -195186241 + (CCCTAA)n Simple_repeat Simple_repeat 3 22 0 587 156 0 46 chr2 55502559 55502668 -195185186 - FRAM SINE Alu -62 114 11 2350 109 71 0 chr2 55503033 55503383 -195184471 - THE1C LTR MaLR 0 375 1 10135 115 8 61 chr2 55503383 55505049 -195182805 - THE1C-int LTR MaLR 0 1580 2 2388 129 0 29 chr2 55505050 55505436 -195182418 - THE1C LTR MaLR 0 375 1 2145 116 10 0 chr2 55505683 55505984 -195181870 + AluSq SINE Alu 9 312 -1 234 253 22 22 chr2 55506967 55507058 -195180796 - L1ME4a LINE L1 -56 6065 5975 305 310 44 13 chr2 55507110 55507268 -195180586 - L1ME4a LINE L1 -236 5885 5723 953 250 136 58 chr2 55507380 55507916 -195179938 - L1ME3A LINE L1 -5 6165 5588 331 155 17 0 chr2 55507927 55507985 -195179869 - MLT1G1 LTR MaLR -5 590 532 268 143 0 0 chr2 55508057 55508099 -195179755 - MLT1G1 LTR MaLR -71 522 481 480 321 118 42 chr2 55508435 55508843 -195179011 - MLT1J1 LTR MaLR -7 439 1 2074 213 90 17 chr2 55511034 55511570 -195176284 + MLT1E2 LTR MaLR 52 626 0 272 257 187 53 chr2 55512166 55512337 -195175517 + MLT1L LTR MaLR 37 230 -385 24 32 0 0 chr2 55512355 55512386 -195175468 + AT_rich Low_complexity Low_complexity 1 31 0 1055 85 0 0 chr2 55512386 55512527 -195175327 - L1MA1 LINE L1 0 6302 6162 1101 117 11 22 chr2 55512527 55512707 -195175147 + L1MA1 LINE L1 5854 6031 -271 2105 127 3 0 chr2 55512708 55513007 -195174847 + AluSq SINE Alu 1 300 -13 2149 182 5 8 chr2 55513100 55513491 -195174363 + MLT1B LTR MaLR 1 390 0 2150 125 10 0 chr2 55514154 55514458 -195173396 + AluSq SINE Alu 1 307 -6 183 80 0 0 chr2 55514458 55514483 -195173371 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 377 317 168 24 chr2 55516175 55516557 -195171297 + L2 LINE L2 2541 2977 -337 1953 136 10 14 chr2 55516659 55516954 -195170900 - AluSx SINE Alu -18 294 1 1424 256 46 68 chr2 55517152 55517758 -195170096 - MLT1E LTR MaLR 0 593 1 43 20 0 0 chr2 55517817 55517867 -195169987 + AT_rich Low_complexity Low_complexity 1 50 0 212 200 200 0 chr2 55517885 55517940 -195169914 + MIR SINE MIR 92 157 -105 510 313 90 26 chr2 55518005 55518238 -195169616 - MIR SINE MIR -2 260 13 1256 218 62 24 chr2 55518357 55518728 -195169126 + MER58D DNA MER1_type 1 385 -1 222 352 0 0 chr2 55519478 55519549 -195168305 + L2 LINE L2 2992 3062 -210 274 327 19 9 chr2 55519655 55519762 -195168092 + L2 LINE L2 2736 2843 -471 636 183 8 8 chr2 55519762 55519893 -195167961 - MSTC LTR MaLR 0 428 298 420 316 250 33 chr2 55519909 55520245 -195167609 + L2 LINE L2 2871 3279 -34 21 0 0 0 chr2 55520778 55520799 -195167055 + AT_rich Low_complexity Low_complexity 1 21 0 2270 56 0 100 chr2 55521184 55521525 -195166329 + AluY SINE Alu 1 307 -4 201 293 66 57 chr2 55521595 55521701 -195166153 + MIR SINE MIR 8 114 -148 39 74 0 0 chr2 55522041 55522122 -195165732 + AT_rich Low_complexity Low_complexity 1 81 0 22 35 0 0 chr2 55523629 55523658 -195164196 + AT_rich Low_complexity Low_complexity 1 29 0 2204 93 0 0 chr2 55523884 55524173 -195163681 + AluY SINE Alu 1 289 -22 207 105 26 0 chr2 55524181 55524219 -195163635 + (CAAA)n Simple_repeat Simple_repeat 4 42 0 246 297 108 0 chr2 55525123 55525197 -195162657 - L2 LINE L2 -5 3308 3227 637 256 74 6 chr2 55525626 55525802 -195162052 + MLT1I LTR MaLR 25 212 -197 491 197 93 38 chr2 55526024 55526207 -195161647 - L1M4 LINE L1 -2131 4015 3823 665 241 7 7 chr2 55526213 55526354 -195161500 - MIR SINE MIR -89 173 33 4235 155 16 32 chr2 55526622 55527377 -195160477 - MER49 LTR ERV1 -12 911 169 522 218 0 0 chr2 55527373 55527474 -195160380 - MER72 LTR ERV1 -621 101 1 * 2449 110 59 54 chr2 55527558 55527984 -195159870 + MSTA LTR MaLR 1 428 0 1438 198 121 99 chr2 55528098 55528653 -195159201 - MLT1F1 LTR MaLR 0 567 1 183 139 0 0 chr2 55528950 55528986 -195158868 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1773 161 7 30 chr2 55529040 55529344 -195158510 - AluJo SINE Alu -15 297 1 30 0 0 0 chr2 55529914 55529944 -195157910 + AT_rich Low_complexity Low_complexity 1 30 0 1818 254 52 50 chr2 55530565 55531338 -195156516 + MER20B DNA MER1_type 9 782 -1 202 128 26 0 chr2 55531428 55531467 -195156387 + CT-rich Low_complexity Low_complexity 1 40 0 839 180 22 22 chr2 55531547 55531795 -195156059 + (TA)n Simple_repeat Simple_repeat 1 247 -113 1938 137 25 0 chr2 55531795 55532079 -195155775 - AluSx SINE Alu -21 291 1 839 180 22 22 chr2 55532079 55532128 -195155726 + (TA)n Simple_repeat Simple_repeat 247 294 -66 273 57 0 0 chr2 55532128 55532163 -195155691 + (CATA)n Simple_repeat Simple_repeat 2 36 0 839 180 22 22 chr2 55532163 55532223 -195155631 + (TA)n Simple_repeat Simple_repeat 294 360 0 468 214 95 16 chr2 55534539 55534665 -195153189 + MIR SINE MIR 110 245 -17 249 311 5 76 chr2 55535468 55535671 -195152183 + MIR SINE MIR 30 212 -50 1159 155 78 2 chr2 55536155 55536479 -195151375 - MSTB1 LTR MaLR -26 406 1 551 347 83 38 chr2 55536643 55537211 -195150643 - L2 LINE L2 -2 3311 2720 286 321 125 0 chr2 55537321 55537433 -195150421 - L2 LINE L2 -620 2694 2569 298 288 171 21 chr2 55537995 55538235 -195149619 - L1MC4 LINE L1 -144 7898 7623 253 277 30 0 chr2 55538232 55538333 -195149521 - L1MC4 LINE L1 -813 7229 7126 * 212 171 24 0 chr2 55538500 55538541 -195149313 + (TG)n Simple_repeat Simple_repeat 1 42 0 180 0 0 0 chr2 55538541 55538561 -195149293 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 1842 171 3 0 chr2 55538665 55538958 -195148896 - AluSx SINE Alu -13 299 6 884 296 102 47 chr2 55538960 55539350 -195148504 + MLT1K LTR MaLR 126 542 -46 405 0 0 0 chr2 55539350 55539395 -195148459 + (CA)n Simple_repeat Simple_repeat 2 46 0 884 296 102 47 chr2 55539395 55539426 -195148428 + MLT1K LTR MaLR 542 570 -18 276 386 35 35 chr2 55539482 55539627 -195148227 - MIR3 SINE MIR -49 159 15 1996 119 0 7 chr2 55541145 55541422 -195146432 - AluSx SINE Alu 0 312 38 9830 35 2 0 chr2 55541702 55543661 -195144193 - L1PA3 LINE L1 -3 6152 4190 480 284 91 63 chr2 55544086 55544692 -195143162 + L1MEd LINE L1 533 1155 -4964 24 32 0 0 chr2 55544861 55544892 -195142962 + AT_rich Low_complexity Low_complexity 1 31 0 591 234 45 0 chr2 55545057 55545211 -195142643 - L1MA7 LINE L1 -339 5952 5792 386 254 175 13 chr2 55545211 55545425 -195142429 + L1MEd LINE L1 3101 3359 -2770 21 57 0 0 chr2 55545487 55545522 -195142332 + AT_rich Low_complexity Low_complexity 1 35 0 268 201 50 138 chr2 55546008 55546167 -195141687 + L2 LINE L2 3169 3313 0 222 37 0 0 chr2 55547149 55547176 -195140678 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 225 361 33 8 chr2 55547183 55547305 -195140549 - L2 LINE L2 -11 3261 3137 2905 146 21 57 chr2 55547456 55548073 -195139781 - L1PA14 LINE L1 -820 5326 4732 * 5635 94 37 1 chr2 55548068 55548884 -195138970 + L1PA14 LINE L1 5315 6159 -2 270 339 48 8 chr2 55549475 55549599 -195138255 + MIR SINE MIR 15 143 -119 196 361 37 90 chr2 55550124 55550559 -195137295 + L2 LINE L2 2836 3247 -25 190 95 48 24 chr2 55550906 55550948 -195136906 + GA-rich Low_complexity Low_complexity 2 44 0 492 18 0 0 chr2 55551310 55551367 -195136487 + (TG)n Simple_repeat Simple_repeat 1 57 0 210 71 0 0 chr2 55552169 55552197 -195135657 + (A)n Simple_repeat Simple_repeat 1 28 0 305 331 40 33 chr2 55552672 55552823 -195135031 - MER5A DNA MER1_type 0 189 38 1268 182 52 78 chr2 55552983 55553159 -195134695 - MER67D LTR ERV1 -196 347 184 2037 117 44 3 chr2 55553159 55553457 -195134397 - AluSx SINE Alu -2 310 1 1268 182 52 78 chr2 55553457 55553637 -195134217 - MER67D LTR ERV1 -359 184 1 346 148 0 74 chr2 55553741 55553822 -195134032 - L1MA6 LINE L1 0 6300 6226 801 200 6 12 chr2 55553841 55554011 -195133843 + L1MA6 LINE L1 5952 6120 -180 35 41 0 0 chr2 55554452 55554501 -195133353 + AT_rich Low_complexity Low_complexity 1 49 0 2306 91 0 0 chr2 55555086 55555383 -195132471 - AluY SINE Alu -14 297 1 2252 131 25 38 chr2 55555875 55556319 -195131535 - L1MA2 LINE L1 -10 6294 5857 1241 345 63 27 chr2 55556335 55557161 -195130693 + L2 LINE L2 2456 3313 0 915 182 133 49 chr2 55557831 55558095 -195129759 + MLT1A1 LTR MaLR 31 316 -49 519 310 102 9 chr2 55558110 55558326 -195129528 + MIR SINE MIR 27 262 0 2273 93 0 10 chr2 55558866 55559178 -195128676 - AluY SINE Alu -2 309 1 2219 102 0 0 chr2 55559178 55559462 -195128392 - AluSg SINE Alu -25 285 2 312 321 129 61 chr2 55560418 55561180 -195126674 - L2 LINE L2 0 3272 2422 206 350 62 0 chr2 55561238 55561335 -195126519 - L2 LINE L2 -1006 2308 2206 45 62 0 0 chr2 55562014 55562094 -195125760 + AT_rich Low_complexity Low_complexity 1 80 0 1715 182 14 0 chr2 55562548 55562844 -195125010 + AluSx SINE Alu 1 300 -12 548 366 4 12 chr2 55563699 55563950 -195123904 - MLT1I LTR MaLR 0 409 161 5329 135 5 12 chr2 55564574 55566148 -195121706 - L1PA16 LINE L1 -1 6165 4576 21 0 0 0 chr2 55566226 55566247 -195121607 + AT_rich Low_complexity Low_complexity 1 21 0 420 275 7 42 chr2 55567209 55567351 -195120503 + L1MEc LINE L1 1671 1807 -4589 554 213 6 53 chr2 55567386 55567555 -195120299 + L1MEc LINE L1 1906 2066 -4330 833 238 113 18 chr2 55567587 55567685 -195120169 - Charlie1b DNA MER1_type -2290 471 384 2086 185 3 3 chr2 55567685 55568048 -195119806 - MLT1A1 LTR MaLR -2 363 1 833 238 113 18 chr2 55568048 55568369 -195119485 - Charlie1b DNA MER1_type -2377 384 18 765 239 85 27 chr2 55568373 55568775 -195119079 + L1MEc LINE L1 2059 2483 -3913 867 257 19 37 chr2 55568801 55568887 -195118967 - MER82 DNA MER2_type -2 651 565 2301 84 0 3 chr2 55568887 55569184 -195118670 - AluSq SINE Alu -17 296 1 867 257 19 37 chr2 55569184 55569311 -195118543 - MER82 DNA MER2_type -88 565 442 285 306 70 51 chr2 55569341 55569498 -195118356 + MIR SINE MIR 2 161 -101 376 184 105 0 chr2 55569550 55569626 -195118228 - MER82 DNA MER2_type -559 94 11 844 207 144 16 chr2 55569650 55569969 -195117885 + L1MEc LINE L1 2477 2836 -3379 300 250 197 8 chr2 55569988 55570120 -195117734 + L1MEc LINE L1 3107 3263 -2952 240 291 97 55 chr2 55570122 55570504 -195117350 + L1MEc LINE L1 3292 3689 -2526 697 299 86 0 chr2 55570649 55571055 -195116799 + L1ME3A LINE L1 2180 2606 -3609 727 264 97 44 chr2 55571075 55571889 -195115965 + L1ME3A LINE L1 5084 5973 -262 494 268 84 7 chr2 55571897 55572039 -195115815 + MER69A DNA AcHobo 4 156 -21 241 233 29 19 chr2 55572365 55572468 -195115386 + L1ME3A LINE L1 6128 6231 -8 262 314 50 36 chr2 55572732 55572872 -195114982 + L2 LINE L2 3168 3309 -4 246 62 0 0 chr2 55573583 55573615 -195114239 + (TGG)n Simple_repeat Simple_repeat 2 33 0 369 0 0 0 chr2 55573641 55573682 -195114172 + (TG)n Simple_repeat Simple_repeat 2 42 0 2071 118 0 0 chr2 55574325 55574635 -195113219 - AluSx SINE Alu 0 312 1 333 318 9 19 chr2 55574761 55574868 -195112986 - MER5A DNA MER1_type -77 112 7 475 313 51 28 chr2 55574925 55575101 -195112753 + MIR SINE MIR 3 182 -80 444 319 20 15 chr2 55575496 55575693 -195112161 - MLT1I LTR MaLR -153 256 59 283 255 103 48 chr2 55575770 55575915 -195111939 - MIR SINE MIR -25 237 85 291 253 77 22 chr2 55576723 55576814 -195111040 + MIR SINE MIR 48 143 -119 343 334 95 48 chr2 55577022 55577609 -195110245 + L2 LINE L2 1636 2250 -1064 6744 132 10 21 chr2 55578739 55579314 -195108540 + L1MA2 LINE L1 5034 5614 -690 2253 106 10 6 chr2 55579314 55579625 -195108229 + AluSx SINE Alu 1 312 0 6744 132 10 21 chr2 55579625 55580331 -195107523 + L1MA2 LINE L1 5614 6304 0 187 213 21 21 chr2 55580598 55580645 -195107209 - L3 LINE CR1 -490 1087 1041 * 354 332 39 31 chr2 55580638 55580841 -195107013 + MIR3 SINE MIR 13 216 -46 466 316 48 6 chr2 55581830 55581998 -195105856 + L2 LINE L2 2659 2833 -481 220 217 0 22 chr2 55582364 55582410 -195105444 + GA-rich Low_complexity Low_complexity 2 46 0 1312 215 34 31 chr2 55582908 55583201 -195104653 + MLT1A2 LTR MaLR 66 359 -15 22 0 0 0 chr2 55583633 55583655 -195104199 + AT_rich Low_complexity Low_complexity 1 22 0 352 222 111 22 chr2 55585836 55585971 -195101883 + L2 LINE L2 3163 3309 -4 2241 125 91 17 chr2 55586860 55587267 -195100587 + MSTB2 LTR MaLR 15 451 -6 210 318 85 47 chr2 55587559 55587770 -195100084 + L2 LINE L2 2636 2854 -460 432 255 50 68 chr2 55588117 55588278 -195099576 - MIR3 SINE MIR 0 208 51 210 37 0 0 chr2 55588636 55588663 -195099191 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2000 129 13 3 chr2 55588917 55589226 -195098628 + AluSx SINE Alu 1 312 0 205 354 25 0 chr2 55589366 55589445 -195098409 + MER91C DNA MER1_type 32 112 -28 2463 151 128 0 chr2 55589509 55589993 -195097861 + L1MB1 LINE L1 5622 6167 -1 2130 92 7 0 chr2 55591119 55591422 -195096432 - AluSq SINE Alu 0 305 1 22 35 0 0 chr2 55591556 55591585 -195096269 + AT_rich Low_complexity Low_complexity 1 29 0 585 308 59 25 chr2 55592013 55592080 -195095774 + MIR SINE MIR 13 76 -186 279 0 0 0 chr2 55592080 55592111 -195095743 + (TC)n Simple_repeat Simple_repeat 1 31 0 585 308 59 25 chr2 55592111 55592280 -195095574 + MIR SINE MIR 76 257 -5 387 355 28 0 chr2 55593072 55593179 -195094675 + L2 LINE L2 3200 3309 -4 2208 253 84 20 chr2 55593417 55593698 -195094156 + L1ME LINE L1 4449 4711 -1455 1875 162 49 0 chr2 55593698 55594026 -195093828 + MER2 DNA MER2_type 1 344 0 2208 253 84 20 chr2 55594026 55594831 -195093023 + L1ME LINE L1 4711 5588 -578 213 39 0 0 chr2 55594865 55594891 -195092963 + (CA)n Simple_repeat Simple_repeat 2 27 0 4668 219 21 2 chr2 55594891 55596275 -195091579 - L1P4 LINE L1 -589 5577 4165 3020 234 50 66 chr2 55596244 55597491 -195090363 - L1 LINE L1 -2446 3700 2473 * 985 69 0 15 chr2 55597490 55597621 -195090233 - L1PA8 LINE L1 -39 6133 6005 * 2221 88 3 25 chr2 55597651 55597968 -195089886 - AluSx SINE Alu -2 310 1 663 147 7 59 chr2 55597971 55598107 -195089747 + MER6 DNA MER2_type 14 863 -2 5938 184 34 23 chr2 55598228 55600494 -195087360 - L1MA7 LINE L1 0 6291 4009 10975 44 0 0 chr2 55600911 55602270 -195085584 - L1PA4 LINE L1 -1590 4556 3198 444 83 0 0 chr2 55602266 55602326 -195085528 + L1PA4 LINE L1 4563 4622 -1524 * 7382 35 0 0 chr2 55602430 55603698 -195084156 + L1PA4 LINE L1 4874 6155 0 5970 211 56 60 chr2 55603713 55605342 -195082512 + L1MC3 LINE L1 5737 7359 -426 1748 215 42 18 chr2 55605766 55606222 -195081632 + MLT1C LTR MaLR 1 467 0 3775 176 29 4 chr2 55606690 55607416 -195080438 - L1MC1 LINE L1 -1 6332 5589 657 133 78 36 chr2 55608258 55608424 -195079430 - L1MA7 LINE L1 -1 6290 6118 190 200 75 0 chr2 55608487 55608527 -195079327 - L2 LINE L2 -10 3303 3261 22 0 0 0 chr2 55608529 55608551 -195079303 + AT_rich Low_complexity Low_complexity 1 22 0 2102 132 135 5 chr2 55609284 55609663 -195078191 + MSTA LTR MaLR 1 428 0 196 294 78 29 chr2 55610323 55610425 -195077429 + MIR SINE MIR 50 156 -106 2302 137 7 30 chr2 55610425 55610835 -195077019 + L1PA16 LINE L1 5742 6144 -22 302 191 0 15 chr2 55611488 55611556 -195076298 - L1MC4 LINE L1 0 8042 7976 * 1245 215 133 3 chr2 55611552 55611919 -195075935 + L1MC4a LINE L1 6982 7396 -412 757 173 7 27 chr2 55612403 55612553 -195075301 - MLT1F LTR MaLR -2 540 394 240 269 78 28 chr2 55612632 55612773 -195075081 - MLT1F LTR MaLR -280 315 168 196 326 32 11 chr2 55613264 55613359 -195074495 + MER5A DNA MER1_type 86 182 -7 2201 159 21 19 chr2 55613428 55613848 -195074006 + L1MA8 LINE L1 5861 6281 -10 298 311 101 78 chr2 55613923 55614280 -195073574 - L1MC/D LINE L1 -2084 5724 5360 22 0 0 0 chr2 55614749 55614771 -195073083 + AT_rich Low_complexity Low_complexity 1 22 0 6628 75 3 0 chr2 55615163 55616229 -195071625 + L1PA7 LINE L1 5071 6139 -15 28 48 0 0 chr2 55616235 55616277 -195071577 + AT_rich Low_complexity Low_complexity 1 42 0 420 310 106 55 chr2 55616283 55616812 -195071042 - L3 LINE CR1 -180 1397 842 382 380 19 23 chr2 55617097 55617355 -195070499 - MIR SINE MIR -1 261 5 310 234 39 0 chr2 55617645 55617722 -195070132 + L2 LINE L2 3234 3313 0 26 23 0 23 chr2 55618466 55618485 -195069369 + AT_rich Low_complexity Low_complexity 1 19 -24 2201 92 0 13 chr2 55618485 55618789 -195069065 + AluY SINE Alu 1 300 -11 26 23 0 23 chr2 55618789 55618813 -195069041 + AT_rich Low_complexity Low_complexity 19 43 0 369 145 0 0 chr2 55619146 55619208 -195068646 + (GGGAA)n Simple_repeat Simple_repeat 5 66 0 2171 115 3 0 chr2 55619777 55620089 -195067765 + AluSq SINE Alu 1 313 0 237 350 50 0 chr2 55620404 55620484 -195067370 + L2 LINE L2 3141 3224 -48 495 313 80 77 chr2 55622421 55622798 -195065056 + L1ME4a LINE L1 5351 5728 -393 331 236 85 20 chr2 55622926 55623172 -195064682 + L1ME4a LINE L1 5788 6105 -16 7102 54 1 0 chr2 55623201 55624838 -195063016 + L1PA5 LINE L1 4513 6150 -4 252 59 0 0 chr2 55624908 55624942 -195062912 + (TG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr2 55624946 55624967 -195062887 + AT_rich Low_complexity Low_complexity 1 21 0 487 301 44 55 chr2 55625469 55625741 -195062113 + L1MEd LINE L1 454 722 -5397 515 291 103 26 chr2 55625809 55626597 -195061257 + L1MEd LINE L1 816 1690 -4620 4005 194 62 21 chr2 55626689 55628435 -195059419 - L1MA10 LINE L1 -30 6304 4476 21 36 0 0 chr2 55628448 55628476 -195059378 + AT_rich Low_complexity Low_complexity 1 28 0 4112 259 60 66 chr2 55628550 55630281 -195057573 - MER77-int LTR ERV1 -2014 4744 2 1913 239 59 50 chr2 55630284 55630861 -195056993 - MER77 LTR ERV1 -2 603 22 386 301 126 8 chr2 55630901 55631140 -195056714 + L1M4 LINE L1 3679 3945 -2201 3714 201 35 16 chr2 55631144 55631895 -195055959 + L1MA6 LINE L1 1 765 -6403 * 4244 170 52 41 chr2 55631894 55633059 -195054795 + L1MA6 LINE L1 3479 4630 -2691 2228 105 7 0 chr2 55633059 55633353 -195054501 + AluSc SINE Alu 3 298 -11 4244 170 52 41 chr2 55633353 55633921 -195053933 + L1MA6 LINE L1 4630 5190 -2131 2049 117 3 0 chr2 55633921 55634211 -195053643 + AluSp SINE Alu 18 308 -5 4244 170 52 41 chr2 55634211 55635304 -195052550 + L1MA6 LINE L1 5190 6269 -1052 222 37 0 0 chr2 55635304 55635331 -195052523 + (TAA)n Simple_repeat Simple_repeat 2 28 0 4244 170 52 41 chr2 55635331 55635449 -195052405 + L1MA6 LINE L1 6269 6384 -937 1998 143 10 0 chr2 55635449 55635750 -195052104 + AluSq SINE Alu 1 304 -9 4244 170 52 41 chr2 55635750 55636512 -195051342 + L1MA6 LINE L1 6384 7317 -4 239 317 10 10 chr2 55637140 55637241 -195050613 + L1M4 LINE L1 4747 4847 -1299 863 176 25 0 chr2 55637462 55637621 -195050233 - MLT2C1 LTR ERVL -234 163 1 313 245 9 47 chr2 55637639 55637745 -195050109 + L1M4 LINE L1 5099 5200 -946 201 200 15 46 chr2 55637745 55637810 -195050044 + (TA)n Simple_repeat Simple_repeat 1 63 0 6247 82 9 11 chr2 55637831 55638769 -195049085 + L1PB2 LINE L1 5215 6150 -1 477 153 12 12 chr2 55638769 55638843 -195049011 + LOR1-int LTR ERV1 4656 4732 -3388 743 249 89 33 chr2 55638857 55639744 -195048110 + L1MA9 LINE L1 5268 6333 -1 23 0 0 0 chr2 55640122 55640145 -195047709 + AT_rich Low_complexity Low_complexity 1 23 0 1127 189 53 9 chr2 55641623 55641850 -195046004 + MLT1D LTR MaLR 5 241 -264 21 36 0 0 chr2 55641906 55641934 -195045920 + AT_rich Low_complexity Low_complexity 1 28 0 355 183 0 29 chr2 55642062 55642166 -195045688 + G-rich Low_complexity Low_complexity 5 105 0 402 301 5 64 chr2 55642168 55642371 -195045483 - MLT1B LTR MaLR -114 276 86 5679 93 2 12 chr2 55642374 55643176 -195044678 - L1PA10 LINE L1 0 6168 5375 444 186 139 0 chr2 55643176 55643262 -195044592 - MLT1B LTR MaLR -292 98 1 2720 244 30 89 chr2 55643263 55643624 -195044230 - MLT1B-int LTR MaLR -1 1370 989 2056 123 3 7 chr2 55643624 55643926 -195043928 + AluSx SINE Alu 1 301 -11 2720 244 30 89 chr2 55643926 55644635 -195043219 - MLT1B-int LTR MaLR -382 989 363 1776 204 47 158 chr2 55644638 55644684 -195043170 - LTR8A LTR ERV1 0 727 678 3107 88 18 20 chr2 55644684 55645129 -195042725 - MLT2A1 LTR ERVL 0 444 1 1776 204 47 158 chr2 55645129 55645862 -195041992 - LTR8A LTR ERV1 -49 678 34 256 200 57 0 chr2 55645876 55645946 -195041908 - MLT1B-int LTR MaLR -1006 365 292 383 156 91 0 chr2 55645960 55646037 -195041817 - MLT1B-int LTR MaLR -1622 113 30 1646 243 56 25 chr2 55646039 55646487 -195041367 - MLT2B1 LTR ERVL -58 462 1 1961 145 73 83 chr2 55646829 55647390 -195040464 - MER4B LTR ERV1 -10 769 1 419 200 18 55 chr2 55648282 55648392 -195039462 + MLT1H1 LTR MaLR 426 531 -24 224 250 0 31 chr2 55648457 55648521 -195039333 + GA-rich Low_complexity Low_complexity 5 66 0 346 285 11 89 chr2 55648521 55648700 -195039154 + MLT1K LTR MaLR 395 559 -29 1788 185 0 0 chr2 55649321 55649618 -195038236 + AluJo SINE Alu 1 297 -15 291 54 0 0 chr2 55650343 55650380 -195037474 + (CA)n Simple_repeat Simple_repeat 2 38 0 526 286 19 3 chr2 55650508 55650721 -195037133 + LTR16C LTR ERVL 214 491 0 23 54 0 0 chr2 55650841 55650878 -195036976 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr2 55651052 55651084 -195036770 + AT_rich Low_complexity Low_complexity 1 32 0 207 300 0 0 chr2 55651335 55651385 -195036469 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 2462 67 0 16 chr2 55651591 55651907 -195035947 - AluY SINE Alu 0 311 1 321 47 0 0 chr2 55654433 55654476 -195033378 + (CA)n Simple_repeat Simple_repeat 2 44 0 317 224 30 0 chr2 55654637 55654704 -195033150 - MLT1A1 LTR MaLR -80 285 217 1942 141 7 3 chr2 55654719 55655025 -195032829 - Tigger3(Golem) DNA MER2_type -1 3028 2722 1275 195 0 5 chr2 55655009 55655230 -195032624 - Tigger3(Golem) DNA MER2_type -2809 220 1 * 955 159 10 18 chr2 55655230 55655528 -195032326 - MLT2D LTR ERVL -43 362 1 1015 225 117 46 chr2 55655657 55655981 -195031873 - MLT1A1 LTR MaLR 0 365 19 1831 143 15 0 chr2 55656470 55656743 -195031111 + AluSx SINE Alu 3 279 -33 338 291 28 67 chr2 55656855 55657034 -195030820 + MER110-int LTR ERV1 2226 2397 -2250 879 224 5 52 chr2 55657407 55657599 -195030255 + MER20 DNA MER1_type 36 218 -1 198 0 0 0 chr2 55658655 55658677 -195029177 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 21 36 0 0 chr2 55658749 55658777 -195029077 + AT_rich Low_complexity Low_complexity 1 28 0 199 54 54 0 chr2 55659320 55659357 -195028497 + (TATAA)n Simple_repeat Simple_repeat 2 40 0 202 355 0 0 chr2 55659450 55659512 -195028342 - L2 LINE L2 -15 3298 3237 307 324 116 35 chr2 55659887 55660171 -195027683 + L2 LINE L2 2411 2717 -597 5707 128 16 19 chr2 55660176 55661542 -195026312 + L1PA13 LINE L1 4784 6142 -21 2238 100 7 0 chr2 55661589 55661888 -195025966 + AluSx SINE Alu 4 304 -8 868 333 82 28 chr2 55661889 55662422 -195025432 + L2 LINE L2 2739 3309 -4 457 286 100 32 chr2 55663056 55663276 -195024578 + MIR SINE MIR 1 235 -27 27 62 0 0 chr2 55663371 55663419 -195024435 + AT_rich Low_complexity Low_complexity 1 48 0 1975 126 20 0 chr2 55663617 55663918 -195023936 - AluSx SINE Alu -5 307 1 638 253 72 23 chr2 55663937 55664202 -195023652 - L1MC4 LINE L1 0 8042 7765 1005 136 0 0 chr2 55664204 55664351 -195023503 - AluSg/x SINE Alu -12 300 154 760 224 133 8 chr2 55664352 55664607 -195023247 - L1MC4 LINE L1 -269 7773 7487 25 51 0 0 chr2 55664665 55664704 -195023150 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 55665947 55665970 -195021884 + AT_rich Low_complexity Low_complexity 1 23 0 8951 37 2 7 chr2 55666031 55667107 -195020747 + MER11C LTR ERVK 1 1071 0 1744 156 17 0 chr2 55667139 55667428 -195020426 - MER84 LTR ERVI 0 507 214 * 1926 103 0 7 chr2 55667426 55667698 -195020156 - MER84 LTR ERVI -237 270 1 430 274 143 45 chr2 55668160 55668405 -195019449 - L2 LINE L2 -169 3144 2876 22 0 0 0 chr2 55669942 55669964 -195017890 + AT_rich Low_complexity Low_complexity 1 22 0 651 260 105 27 chr2 55670630 55670849 -195017005 + MIR SINE MIR 22 257 -5 359 211 115 0 chr2 55670872 55670976 -195016878 + L3 LINE CR1 901 1016 -561 260 371 54 12 chr2 55671369 55671536 -195016318 + L3 LINE CR1 1298 1471 -106 1333 287 95 13 chr2 55672596 55673748 -195014106 + L1ME3A LINE L1 2184 3400 -2815 264 327 37 0 chr2 55673816 55673923 -195013931 + L1ME3A LINE L1 3524 3634 -2581 1500 262 91 36 chr2 55673967 55674062 -195013792 + L1ME3A LINE L1 3754 3842 -2373 2245 91 20 0 chr2 55674062 55674360 -195013494 + AluSp SINE Alu 1 304 -9 1500 262 91 36 chr2 55674360 55675213 -195012641 + L1ME3A LINE L1 3842 4754 -1461 1006 186 130 30 chr2 55675226 55675565 -195012289 - Charlie1 DNA MER1_type -40 2721 2349 16045 154 76 3 chr2 55675693 55682080 -195005774 - L1PB1 LINE L1 -9 6858 1 702 168 0 0 chr2 55682114 55682233 -195005621 - AluSg/x SINE Alu -7 305 187 429 271 99 68 chr2 55682236 55682723 -195005131 + L1ME3A LINE L1 4807 5308 -907 631 259 19 13 chr2 55682729 55682946 -195004908 + L1ME3A LINE L1 5383 5601 -632 736 284 64 21 chr2 55682957 55683285 -195004569 + L1ME3A LINE L1 5656 5997 -242 271 287 271 6 chr2 55683348 55683529 -195004325 - MIR SINE MIR -10 252 24 299 328 101 0 chr2 55683543 55683662 -195004192 - MIR SINE MIR -54 208 78 1026 168 107 0 chr2 55685853 55686050 -195001804 + MER20 DNA MER1_type 2 219 0 1565 183 30 21 chr2 55686271 55686752 -195001102 + L1ME1 LINE L1 5095 5578 -588 273 202 21 64 chr2 55686758 55686852 -195001002 + L1ME1 LINE L1 5670 5759 -405 2798 226 73 6 chr2 55686857 55687538 -195000316 - MER50 LTR ERV1 -7 727 1 1216 225 26 59 chr2 55687541 55687964 -194999890 + L1ME1 LINE L1 5757 6165 -1 1164 279 117 37 chr2 55688560 55689180 -194998674 - L2 LINE L2 0 3313 2744 1097 233 105 120 chr2 55689180 55689782 -194998072 + MLT1E LTR MaLR 1 593 0 1164 279 117 37 chr2 55689782 55690148 -194997706 - L2 LINE L2 -569 2744 2160 261 0 0 0 chr2 55690955 55690984 -194996870 + (A)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr2 55691600 55691621 -194996233 + AT_rich Low_complexity Low_complexity 1 21 0 256 318 53 0 chr2 55692601 55692733 -194995121 - MIR SINE MIR -31 231 93 5755 148 27 13 chr2 55692763 55692948 -194994906 - L1MA7 LINE L1 0 6291 6110 2276 95 0 0 chr2 55692948 55693244 -194994610 + AluSc SINE Alu 1 296 -13 5755 148 27 13 chr2 55693244 55694243 -194993611 - L1MA7 LINE L1 -181 6110 5099 1200 157 195 42 chr2 55694293 55694429 -194993425 + AluSx SINE Alu 1 115 -187 187 54 54 0 chr2 55694429 55694466 -194993388 + (TA)n Simple_repeat Simple_repeat 1 39 0 1200 157 195 42 chr2 55694466 55694591 -194993263 + AluSx SINE Alu 115 302 0 225 0 0 0 chr2 55695795 55695820 -194992034 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 25 0 0 0 chr2 55696078 55696103 -194991751 + AT_rich Low_complexity Low_complexity 1 25 0 1522 220 142 69 chr2 55696299 55696977 -194990877 + LTR1B LTR ERV1 1 727 -99 259 116 0 23 chr2 55696975 55697018 -194990836 + LTR28 LTR ERV1 978 1019 -1 * 189 0 0 0 chr2 55697945 55697966 -194989888 + (TA)n Simple_repeat Simple_repeat 2 22 0 549 266 52 76 chr2 55698090 55698511 -194989343 + L1MEd LINE L1 777 1187 -5018 308 273 11 23 chr2 55698548 55698636 -194989218 - L2 LINE L2 -7 3306 3220 297 303 46 41 chr2 55698709 55698998 -194988856 + L1MEd LINE L1 1206 1504 -4711 840 271 119 60 chr2 55699006 55699586 -194988268 - L2 LINE L2 -2 3311 2706 1276 171 63 3 chr2 55699590 55699866 -194987988 + L1ME LINE L1 5542 5823 -343 1154 283 101 37 chr2 55699870 55700815 -194987039 + L1MEd LINE L1 1401 2405 -3991 213 337 10 50 chr2 55702052 55702153 -194985701 + MIR3 SINE MIR 94 190 -18 196 156 0 44 chr2 55702253 55702298 -194985556 - MIR SINE MIR -50 212 170 2321 148 5 18 chr2 55702679 55703065 -194984789 + MLT1B LTR MaLR 3 383 -7 330 273 11 0 chr2 55703112 55703200 -194984654 - MIR SINE MIR -80 128 40 3664 110 65 15 chr2 55703258 55703841 -194984013 + LTR9 LTR ERV1 1 612 0 308 285 30 42 chr2 55704257 55704422 -194983432 + HAL1 LINE L1 2302 2464 -43 2428 147 25 9 chr2 55705823 55706259 -194981595 - L1MA6 LINE L1 0 6300 5858 243 0 0 0 chr2 55706818 55706845 -194981009 + (T)n Simple_repeat Simple_repeat 1 27 0 26 0 0 0 chr2 55707347 55707373 -194980481 + AT_rich Low_complexity Low_complexity 1 26 0 300 285 123 35 chr2 55707782 55708010 -194979844 - L3 LINE CR1 -23 1554 1307 22 0 0 0 chr2 55708190 55708212 -194979642 + AT_rich Low_complexity Low_complexity 1 22 0 322 46 77 0 chr2 55708521 55708586 -194979268 + (TA)n Simple_repeat Simple_repeat 1 70 0 534 305 89 24 chr2 55708741 55709121 -194978733 - L1ME LINE L1 -503 5728 5324 609 325 66 38 chr2 55709143 55709779 -194978075 - L1ME LINE L1 -941 5274 4621 322 293 73 39 chr2 55709918 55710123 -194977731 - L1ME LINE L1 -3437 2778 2567 371 300 20 10 chr2 55710123 55710223 -194977631 + L2 LINE L2 3204 3304 -9 360 303 37 22 chr2 55710225 55710496 -194977358 - L1ME LINE L1 -3702 2513 2239 3629 159 16 16 chr2 55710697 55711382 -194976472 - L1MB3 LINE L1 -8 6175 5491 489 302 46 62 chr2 55711657 55711962 -194975892 - L1ME LINE L1 -898 1678 1333 1030 202 202 22 chr2 55712670 55712987 -194974867 + MLT1A2 LTR MaLR 1 374 0 4327 70 2 5 chr2 55713224 55713780 -194974074 + MER41A LTR ERV1 1 554 0 364 347 146 14 chr2 55714026 55714245 -194973609 - L3 LINE CR1 -1010 567 320 32 26 0 0 chr2 55714855 55714894 -194972960 + AT_rich Low_complexity Low_complexity 1 39 0 211 320 30 20 chr2 55715157 55715257 -194972597 - MIR SINE MIR -3 259 159 1509 222 123 10 chr2 55715262 55715677 -194972177 + MLT1C LTR MaLR 6 467 0 465 313 8 16 chr2 55715677 55715829 -194972025 - MIR SINE MIR -63 145 15 378 42 0 0 chr2 55715829 55715877 -194971977 + (TG)n Simple_repeat Simple_repeat 1 48 0 261 258 15 0 chr2 55715890 55715956 -194971898 + (CATATA)n Simple_repeat Simple_repeat 3 69 0 25 0 0 0 chr2 55716643 55716668 -194971186 + AT_rich Low_complexity Low_complexity 1 25 0 27300 63 5 14 chr2 55716671 55720856 -194966998 + L1PA8 LINE L1 2031 6172 0 594 267 92 18 chr2 55723195 55723412 -194964442 + MIR SINE MIR 20 252 -10 289 291 0 0 chr2 55723598 55723677 -194964177 + A-rich Low_complexity Low_complexity 1 79 0 1927 167 0 0 chr2 55724106 55724411 -194963443 + AluJo SINE Alu 1 305 -7 210 308 13 26 chr2 55725277 55725355 -194962499 - L2 LINE L2 -9 3263 3187 23 0 0 0 chr2 55725358 55725381 -194962473 + AT_rich Low_complexity Low_complexity 1 23 0 238 94 0 0 chr2 55725486 55725518 -194962336 + AluSx SINE Alu 1 32 -269 1708 174 0 33 chr2 55726081 55726386 -194961468 + AluJo SINE Alu 2 296 -16 2073 124 3 0 chr2 55726388 55726709 -194961145 + AluSx SINE Alu 1 322 0 266 326 68 37 chr2 55727903 55728093 -194959761 - L3 LINE CR1 -251 1326 1131 626 298 56 5 chr2 55728630 55728828 -194959026 - L3 LINE CR1 -472 1105 898 1713 152 84 79 chr2 55730664 55731058 -194956796 + MSTD LTR MaLR 1 396 0 1956 133 3 7 chr2 55731707 55731993 -194955861 + AluSx SINE Alu 11 295 -17 213 39 0 0 chr2 55733079 55733105 -194954749 + (A)n Simple_repeat Simple_repeat 1 26 0 279 281 45 0 chr2 55733268 55733357 -194954497 - MIR SINE MIR -14 248 156 23 0 0 0 chr2 55733367 55733390 -194954464 + AT_rich Low_complexity Low_complexity 1 23 0 299 275 134 6 chr2 55733515 55733671 -194954183 + MIR SINE MIR 34 206 -56 660 352 89 19 chr2 55733917 55734582 -194953272 - L2 LINE L2 -158 3155 2447 450 208 21 10 chr2 55737229 55737325 -194950529 - MER67D LTR ERV1 -108 406 310 766 188 4 115 chr2 55737467 55737701 -194950153 - MER67D LTR ERV1 -306 208 1 2247 89 0 0 chr2 55738115 55738395 -194949459 + AluSc SINE Alu 1 280 -29 342 205 0 0 chr2 55738409 55738492 -194949362 + (TA)n Simple_repeat Simple_repeat 1 83 0 2109 116 17 3 chr2 55739764 55740057 -194947797 - AluSg SINE Alu -13 297 1 223 217 181 12 chr2 55740064 55740147 -194947707 - L2 LINE L2 -16 3297 3201 552 198 40 106 chr2 55740744 55740971 -194946883 + MER58C DNA MER1_type 1 212 -3 271 251 199 41 chr2 55741810 55741981 -194945873 - MIR SINE MIR -64 198 1 1578 225 33 0 chr2 55743886 55744193 -194943661 + MER45B DNA AcHobo 5 321 -719 2405 185 68 102 chr2 55744505 55745231 -194942623 + MER45B DNA AcHobo 340 1040 0 201 237 0 0 chr2 55745302 55745340 -194942514 + (CGTG)n Simple_repeat Simple_repeat 1 38 0 37 39 0 0 chr2 55745398 55745449 -194942405 + AT_rich Low_complexity Low_complexity 1 51 0 222 355 174 0 chr2 55746211 55746366 -194941488 + MIR3 SINE MIR 10 191 -17 382 324 58 7 chr2 55747175 55747314 -194940540 + MER5A DNA MER1_type 43 188 -1 314 303 66 33 chr2 55747514 55747666 -194940188 + MER5B DNA MER1_type 1 157 -21 1197 225 24 83 chr2 55748204 55748253 -194939601 + MLT1A2 LTR MaLR 1 51 -323 2211 106 21 63 chr2 55748253 55748631 -194939223 - THE1B LTR MaLR 0 364 3 1197 225 24 83 chr2 55748631 55748955 -194938899 + MLT1A2 LTR MaLR 51 352 -22 2492 230 12 0 chr2 55749021 55749534 -194938320 + LTR53 LTR ERVL 1 519 0 537 306 50 27 chr2 55750438 55750660 -194937194 + MIR SINE MIR 28 254 -8 329 291 128 64 chr2 55750743 55750884 -194936970 - MIR3 SINE MIR -26 182 33 6269 142 16 30 chr2 55751202 55752649 -194935205 + L1MA3 LINE L1 4862 6305 0 21 0 0 0 chr2 55752662 55752683 -194935171 + AT_rich Low_complexity Low_complexity 1 21 0 190 276 69 83 chr2 55754989 55755134 -194932720 + L2 LINE L2 2948 3090 -182 263 303 58 100 chr2 55757167 55757834 -194930020 + L2 LINE L2 1755 2393 -921 874 204 6 6 chr2 55757918 55758085 -194929769 + FRAM SINE Alu 1 164 -12 195 42 0 0 chr2 55758091 55758115 -194929739 + (TA)n Simple_repeat Simple_repeat 1 24 0 4704 141 40 6 chr2 55758124 55758940 -194928914 + L1PB4 LINE L1 5310 6153 -3 284 326 68 71 chr2 55758991 55759301 -194928553 + L2 LINE L2 2619 2927 -387 771 229 6 33 chr2 55760012 55760195 -194927659 - MIR SINE MIR -15 247 70 6237 89 17 0 chr2 55760200 55761487 -194926367 + L1PA13 LINE L1 4843 6144 -19 30 27 0 0 chr2 55761957 55761994 -194925860 + AT_rich Low_complexity Low_complexity 1 37 0 326 362 0 0 chr2 55762576 55762692 -194925162 - MIR SINE MIR -112 150 35 305 364 15 30 chr2 55763327 55763459 -194924395 - L2 LINE L2 -2 3270 3141 234 91 0 0 chr2 55763977 55764010 -194923844 + (A)n Simple_repeat Simple_repeat 1 33 0 208 246 46 31 chr2 55766918 55766983 -194920871 + MIR3 SINE MIR 143 208 0 25 0 0 0 chr2 55767191 55767216 -194920638 + AT_rich Low_complexity Low_complexity 1 25 0 256 286 34 68 chr2 55767297 55767503 -194920351 - L1MC5 LINE L1 -801 7160 6962 * 5827 101 9 0 chr2 55767498 55768314 -194919540 - L1PA8 LINE L1 -8 6164 5342 * 12710 172 16 28 chr2 55768310 55771896 -194915958 - L1P3 LINE L1 -2839 3622 2 1155 249 29 13 chr2 55771916 55772225 -194915629 - L1MC4 LINE L1 -958 7084 6771 351 231 276 13 chr2 55772510 55772821 -194915033 - L1MC4a LINE L1 -1474 6334 5942 447 294 36 40 chr2 55773263 55773515 -194914339 - HAL1b LINE L1 -725 623 373 314 319 49 53 chr2 55773519 55773782 -194914072 - HAL1b LINE L1 -1033 315 54 1214 184 89 78 chr2 55773830 55774200 -194913654 + MLT1B LTR MaLR 1 374 -16 240 163 0 0 chr2 55775065 55775108 -194912746 + CT-rich Low_complexity Low_complexity 1 43 0 31 0 0 0 chr2 55776720 55776751 -194911103 + AT_rich Low_complexity Low_complexity 1 31 0 201 346 85 8 chr2 55776825 55776955 -194910899 - L2 LINE L2 -574 2740 2601 231 365 131 0 chr2 55778015 55778160 -194909694 + L2 LINE L2 3087 3250 -22 260 240 53 53 chr2 55778217 55778292 -194909562 + L2 LINE L2 3158 3232 -40 214 254 0 16 chr2 55778747 55778810 -194909044 + (CA)n Simple_repeat Simple_repeat 1 62 0 362 217 137 147 chr2 55780080 55780319 -194907535 + L2 LINE L2 3010 3247 -66 1642 166 54 0 chr2 55780319 55780596 -194907258 + AluSx SINE Alu 1 292 -20 362 217 137 147 chr2 55780596 55780655 -194907199 + L2 LINE L2 3247 3305 -8 779 257 63 17 chr2 55783006 55783243 -194904611 + L2 LINE L2 574 821 -2493 26 30 0 0 chr2 55783280 55783313 -194904541 + AT_rich Low_complexity Low_complexity 1 33 0 2070 176 19 3 chr2 55783720 55784079 -194903775 - MLT1A1 LTR MaLR 0 365 1 1939 132 62 17 chr2 55784460 55784815 -194903039 + THE1C LTR MaLR 1 371 -4 308 235 136 86 chr2 55786253 55786415 -194901439 - MIR3 SINE MIR -9 199 30 24 0 0 0 chr2 55786819 55786843 -194901011 + AT_rich Low_complexity Low_complexity 1 24 0 705 211 174 0 chr2 55787163 55787353 -194900501 - MER58A DNA MER1_type -1 223 1 426 258 92 33 chr2 55787362 55787602 -194900252 - MER112 DNA MER1_type -1 255 2 14659 134 17 20 chr2 55790310 55792735 -194895119 + Tigger1 DNA MER2_type 1 2418 0 415 280 103 33 chr2 55792842 55793171 -194894683 + L1M4 LINE L1 4468 4819 -1327 388 329 106 17 chr2 55793172 55793409 -194894445 - L1ME3A LINE L1 -224 5946 5689 344 309 161 21 chr2 55793488 55793724 -194894130 - L1ME3A LINE L1 -577 5585 5317 476 303 98 26 chr2 55793942 55794206 -194893648 - L1ME3 LINE L1 -217 5945 5663 421 277 97 36 chr2 55794385 55794963 -194892891 - L1M2 LINE L1 -773 5373 4806 334 324 68 7 chr2 55795413 55795561 -194892293 - L1MEc LINE L1 -4642 1754 1598 233 191 103 15 chr2 55795783 55795851 -194892003 - MER50 LTR ERV1 -574 160 87 352 301 142 6 chr2 55796705 55796888 -194890966 - MLT1K LTR MaLR -4 584 377 340 257 0 27 chr2 55796918 55796992 -194890862 - MLT1K LTR MaLR -363 225 154 2315 100 0 0 chr2 55798854 55799155 -194888699 - AluSg SINE Alu -9 301 1 4086 133 12 21 chr2 55799571 55800248 -194887606 + L1PA15 LINE L1 5495 6165 0 21 0 0 0 chr2 55800248 55800269 -194887585 + AT_rich Low_complexity Low_complexity 1 21 0 187 273 68 0 chr2 55800522 55800566 -194887288 + L2 LINE L2 3226 3272 0 229 228 25 0 chr2 55800687 55800766 -194887088 + (TA)n Simple_repeat Simple_repeat 2 82 0 201 179 0 0 chr2 55801875 55801914 -194885940 - L2 LINE L2 -5 3308 3270 181 366 43 21 chr2 55803484 55803577 -194884277 + MIR3 SINE MIR 10 104 -104 2207 140 22 6 chr2 55803989 55804347 -194883507 + THE1B LTR MaLR 1 364 0 1508 238 44 79 chr2 55804727 55804979 -194882875 - MLT1F1 LTR MaLR 0 567 308 2457 74 15 0 chr2 55804979 55805316 -194882538 - L1PA7 LINE L1 -1 6153 5812 1508 238 44 79 chr2 55805316 55805435 -194882419 - MLT1F1 LTR MaLR -259 308 186 282 29 0 0 chr2 55805435 55805470 -194882384 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 1508 238 44 79 chr2 55805470 55805653 -194882201 - MLT1F1 LTR MaLR -381 186 8 1464 167 4 50 chr2 55806970 55807251 -194880603 - AluJo SINE Alu -21 291 24 406 237 172 12 chr2 55807400 55807569 -194880285 + MLT1J2 LTR MaLR 1 196 -254 511 282 68 36 chr2 55807907 55808159 -194879695 - MIR SINE MIR 0 262 3 2167 126 0 3 chr2 55808351 55808661 -194879193 + AluSg SINE Alu 1 309 -1 1638 181 0 44 chr2 55808673 55808994 -194878860 + AluJo SINE Alu 3 309 -3 299 233 60 43 chr2 55809506 55809622 -194878232 - MIR3 SINE MIR -10 198 81 2041 101 42 3 chr2 55810281 55810568 -194877286 + AluSc SINE Alu 1 298 -11 1716 230 0 13 chr2 55810823 55810991 -194876863 + MLT1A2 LTR MaLR 1 170 -204 2189 105 7 0 chr2 55810991 55811285 -194876569 + AluSx SINE Alu 1 296 -16 1716 230 0 13 chr2 55811285 55811495 -194876359 + MLT1A2 LTR MaLR 170 374 0 482 303 92 16 chr2 55812555 55812740 -194875114 + MIR SINE MIR 30 228 -34 932 57 81 0 chr2 55812751 55812874 -194874980 - LTR12 LTR ERV1 0 714 582 4430 128 76 47 chr2 55812875 55813677 -194874177 - LTR12 LTR ERV1 -1 825 1 396 191 80 80 chr2 55813825 55814050 -194873804 - pTR5 LTR ERV1 -1473 965 741 261 274 116 0 chr2 55815806 55815901 -194871953 - MLT1I LTR MaLR -8 401 296 226 319 133 0 chr2 55816015 55816128 -194871726 - MLT1I LTR MaLR -271 138 11 386 182 13 0 chr2 55816543 55816620 -194871234 + MER53 DNA DNA 1 78 -111 2367 105 14 8 chr2 55816629 55816982 -194870872 - THE1A LTR MaLR 0 355 1 11344 94 22 2 chr2 55816987 55818524 -194869330 - THE1A-int LTR MaLR -12 1568 1 2355 116 8 8 chr2 55818524 55818879 -194868975 - THE1A LTR MaLR 0 355 1 436 170 80 0 chr2 55818900 55819000 -194868854 + MER53 DNA DNA 82 189 0 260 223 164 47 chr2 55819459 55819715 -194868139 + L1M4 LINE L1 4285 4570 -1576 576 211 8 30 chr2 55819917 55820050 -194867804 - MER45 DNA AcHobo -873 167 38 1128 285 144 45 chr2 55820162 55821239 -194866615 + HAL1 LINE L1 734 1916 -591 20959 174 29 23 chr2 55821531 55827457 -194860397 + L1PA13 LINE L1 845 7598 -3 318 293 85 73 chr2 55827667 55827913 -194859941 + HAL1 LINE L1 2256 2504 -3 257 208 14 0 chr2 55828121 55828193 -194859661 + (TA)n Simple_repeat Simple_repeat 1 73 0 216 0 0 0 chr2 55829450 55829474 -194858380 + (A)n Simple_repeat Simple_repeat 1 24 0 311 363 112 34 chr2 55829488 55830235 -194857619 + L2 LINE L2 1279 2084 -1230 1092 159 4 88 chr2 55830370 55830609 -194857245 - MER20 DNA MER1_type 0 219 1 279 341 104 30 chr2 55830920 55831084 -194856770 + MER5A DNA MER1_type 13 188 -1 2039 183 73 0 chr2 55831589 55831988 -194855866 - MSTA LTR MaLR 0 428 1 492 281 124 36 chr2 55832248 55832579 -194855275 + MLT1J2 LTR MaLR 67 426 -24 42 36 0 0 chr2 55832597 55832653 -194855201 + AT_rich Low_complexity Low_complexity 1 56 0 5531 144 32 27 chr2 55832794 55833104 -194854750 + L1MA8 LINE L1 5057 5364 -927 2023 128 3 0 chr2 55833104 55833393 -194854461 + AluSq SINE Alu 1 290 -23 5531 144 32 27 chr2 55833393 55834307 -194853547 + L1MA8 LINE L1 5364 6286 -5 299 325 88 57 chr2 55834774 55834968 -194852886 - L2 LINE L2 -194 3078 2879 2044 243 55 28 chr2 55835199 55835776 -194852078 - MLT1E LTR MaLR 0 593 1 21 36 0 0 chr2 55835896 55835924 -194851930 + AT_rich Low_complexity Low_complexity 1 28 0 203 245 41 0 chr2 55836225 55836274 -194851580 - L2 LINE L2 -1 3312 3262 23 33 0 0 chr2 55836294 55836324 -194851530 + AT_rich Low_complexity Low_complexity 1 30 0 1777 217 139 12 chr2 55836461 55836973 -194850881 - MER119 DNA MER1_type 0 583 7 920 88 0 0 chr2 55837965 55838090 -194849764 - AluY SINE Alu 0 311 187 332 303 8 38 chr2 55838578 55838710 -194849144 + MIR SINE MIR 16 143 -65 2344 87 0 0 chr2 55838720 55839020 -194848834 + AluY SINE Alu 1 300 -11 240 200 0 0 chr2 55839354 55839404 -194848450 + (CGAG)n Simple_repeat Simple_repeat 2 51 0 2205 139 31 0 chr2 55839656 55840009 -194847845 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr2 55840423 55840447 -194847407 + AT_rich Low_complexity Low_complexity 1 24 0 1682 166 17 55 chr2 55840527 55840888 -194846966 - MER7A DNA MER2_type 0 346 2 22 0 0 0 chr2 55843148 55843170 -194844684 + AT_rich Low_complexity Low_complexity 1 22 0 1966 155 29 23 chr2 55844570 55844912 -194842942 + MER7A DNA MER2_type 5 346 0 2151 158 69 5 chr2 55845422 55845814 -194842040 - MER47B DNA MER2_type 0 418 2 580 253 68 63 chr2 55845934 55846171 -194841683 + L2 LINE L2 3076 3313 0 181 194 0 0 chr2 55846189 55846220 -194841634 + L2 LINE L2 2600 2630 -684 389 242 148 61 chr2 55846221 55846574 -194841280 + MLT1J2 LTR MaLR 41 446 0 526 312 167 57 chr2 55846579 55847126 -194840728 + L2 LINE L2 2652 3270 -43 11883 149 26 51 chr2 55847181 55848240 -194839614 + L1MA2 LINE L1 2607 3691 -2613 2036 112 0 7 chr2 55848240 55848509 -194839345 + AluSc SINE Alu 3 269 -40 11883 149 26 51 chr2 55848509 55851244 -194836610 + L1MA2 LINE L1 3691 6304 0 231 226 170 0 chr2 55851293 55851399 -194836455 + L1ME4a LINE L1 5989 6112 -9 1726 54 13 0 chr2 55851500 55851724 -194836130 - L1P2 LINE L1 -601 5553 5327 * 1965 39 0 0 chr2 55851723 55851956 -194835898 + L1P2 LINE L1 5549 5781 -373 238 88 0 0 chr2 55851947 55851981 -194835873 + L1PA3 LINE L1 4046 4079 -2067 * 11252 32 0 0 chr2 55851981 55854095 -194833759 + L1PA3 LINE L1 4039 6152 -3 3086 47 3 3 chr2 55854112 55854488 -194833366 + L1PA5 LINE L1 5770 6148 -6 245 39 78 0 chr2 55854488 55854539 -194833315 + (TA)n Simple_repeat Simple_repeat 2 56 0 21 82 0 0 chr2 55854906 55854955 -194832899 + AT_rich Low_complexity Low_complexity 1 49 0 251 203 27 54 chr2 55855001 55855075 -194832779 - MER20B DNA MER1_type -190 593 522 386 320 32 8 chr2 55855370 55855495 -194832359 - MER20B DNA MER1_type -585 198 71 821 247 4 37 chr2 55855496 55855767 -194832087 - MER20B DNA MER1_type -7 776 515 1560 117 0 9 chr2 55856031 55856277 -194831577 + AluSg/x SINE Alu 70 313 0 259 323 45 15 chr2 55856314 55856447 -194831407 - MER20B DNA MER1_type -611 172 36 290 317 49 8 chr2 55856614 55856737 -194831117 + L2 LINE L2 3186 3313 0 26 0 0 0 chr2 55856796 55856822 -194831032 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr2 55857024 55857052 -194830802 + AT_rich Low_complexity Low_complexity 1 28 0 233 135 58 0 chr2 55857242 55857294 -194830560 - L1MC3 LINE L1 -155 7630 7576 3405 179 103 6 chr2 55857312 55857655 -194830199 - L1MC3 LINE L1 -533 7252 6944 188 83 0 28 chr2 55857655 55857691 -194830163 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 3405 179 103 6 chr2 55857691 55858064 -194829790 - L1MC3 LINE L1 -841 6944 6466 545 306 51 10 chr2 55858486 55858682 -194829172 - MIR SINE MIR 0 262 59 2454 135 0 3 chr2 55858821 55859207 -194828647 - L1PA16 LINE L1 -9 6157 5773 2670 97 8 0 chr2 55859418 55859779 -194828075 + THE1B LTR MaLR 1 364 0 680 208 107 7 chr2 55860984 55861133 -194826721 + MER3 DNA MER1_type 44 207 -2 229 139 0 0 chr2 55861286 55861322 -194826532 - L2 LINE L2 -5 3308 3273 2325 109 0 0 chr2 55861400 55861711 -194826143 + AluSq SINE Alu 1 311 -2 623 170 80 2 chr2 55862799 55863010 -194824844 - MLT1C LTR MaLR 0 467 204 1544 22 0 0 chr2 55863015 55863196 -194824658 + L1PA2 LINE L1 5975 6155 0 5705 129 34 21 chr2 55863200 55864236 -194823618 + L1MA8 LINE L1 4790 5851 -440 2097 88 26 0 chr2 55864236 55864508 -194823346 + AluY SINE Alu 1 279 -32 5705 129 34 21 chr2 55864508 55864949 -194822905 + L1MA8 LINE L1 5851 6285 -6 22 0 0 0 chr2 55864949 55864971 -194822883 + AT_rich Low_complexity Low_complexity 1 22 0 215 200 0 0 chr2 55865140 55865180 -194822674 - MIR SINE MIR -14 248 209 212 222 9 0 chr2 55865709 55865779 -194822075 + CT-rich Low_complexity Low_complexity 1 70 0 249 33 0 0 chr2 55865779 55865809 -194822045 + (CA)n Simple_repeat Simple_repeat 1 30 0 2095 130 0 3 chr2 55865983 55866276 -194821578 + AluSx SINE Alu 1 292 -20 518 259 0 9 chr2 55866332 55866448 -194821406 + L2 LINE L2 3199 3313 0 544 155 34 150 chr2 55866522 55866583 -194821271 - Ricksha DNA DNA -1077 969 933 2777 163 15 93 chr2 55866583 55867184 -194820670 - MLT2B3 LTR ERVL 0 554 1 1996 142 7 0 chr2 55867612 55868092 -194819762 + AluSx SINE Alu 1 482 0 186 191 0 0 chr2 55868089 55868131 -194819723 + GA-rich Low_complexity Low_complexity 2 43 0 388 203 8 34 chr2 55869541 55869658 -194818196 + MLT1J LTR MaLR 18 166 -323 400 246 42 34 chr2 55869672 55869819 -194818035 + MER21B LTR ERV1 13 198 -407 1212 258 81 34 chr2 55869839 55870380 -194817474 + MER21B LTR ERV1 123 739 -124 754 283 39 31 chr2 55870455 55870713 -194817141 + MLT1J LTR MaLR 198 457 -54 324 328 39 35 chr2 55871212 55871471 -194816383 - MIR SINE MIR 0 262 3 1350 272 58 55 chr2 55871695 55872242 -194815612 + MLT1H1 LTR MaLR 5 553 -2 264 227 47 62 chr2 55872864 55872992 -194814862 - LTR67 LTR ERVL 0 557 432 4129 93 16 0 chr2 55873472 55874052 -194813802 - L1PA13 LINE L1 -5 6158 5570 2384 259 179 121 chr2 55874094 55874872 -194812982 + L2 LINE L2 138 870 -2443 1523 155 6 5 chr2 55874872 55875176 -194812678 - MER46B DNA MER2_type 0 236 1 2384 259 179 121 chr2 55875176 55876380 -194811474 + L2 LINE L2 870 2003 -1310 962 164 62 0 chr2 55876380 55876557 -194811297 + MER5A DNA MER1_type 2 189 0 2384 259 179 121 chr2 55876557 55876993 -194810861 + L2 LINE L2 2003 2413 -900 5778 43 14 7 chr2 55876993 55877695 -194810159 - SVA Other Other 0 1386 680 2384 259 179 121 chr2 55877695 55877958 -194809896 + L2 LINE L2 2413 3275 -38 2140 196 43 20 chr2 55878486 55878975 -194808879 + MLT1D LTR MaLR 1 500 -5 3582 157 71 16 chr2 55880162 55880836 -194807018 + MER50 LTR ERV1 1 711 -23 349 248 20 13 chr2 55880941 55880965 -194806889 + (TA)n Simple_repeat Simple_repeat 1 23 -127 2284 79 0 0 chr2 55880965 55881245 -194806609 + AluY SINE Alu 26 305 -6 349 248 20 13 chr2 55881245 55881369 -194806485 + (TA)n Simple_repeat Simple_repeat 23 150 0 1515 268 84 63 chr2 55881614 55881994 -194805860 + MLT1G1 LTR MaLR 13 384 -211 1385 106 65 18 chr2 55881994 55882211 -194805643 + MER30 DNA MER1_type 4 230 0 1515 268 84 63 chr2 55882211 55882373 -194805481 + MLT1G1 LTR MaLR 384 570 -25 2164 131 15 15 chr2 55882373 55882710 -194805144 - MER1B DNA MER1_type 0 337 1 1515 268 84 63 chr2 55882710 55882737 -194805117 + MLT1G1 LTR MaLR 570 595 0 682 110 79 146 chr2 55882823 55882987 -194804867 + MER21A LTR ERV1 13 165 -766 1462 187 71 4 chr2 55883684 55883952 -194803902 + AluJb SINE Alu 1 286 -26 243 306 82 52 chr2 55884036 55884500 -194803354 + HAL1b LINE L1 60 537 -811 26 50 0 0 chr2 55884871 55884911 -194802943 + AT_rich Low_complexity Low_complexity 1 40 0 335 244 102 24 chr2 55884994 55885199 -194802655 + L1M4 LINE L1 2889 3109 -3037 269 298 18 39 chr2 55885266 55885554 -194802300 + L1P LINE L1 2182 2465 -3681 337 301 66 53 chr2 55885741 55886282 -194801572 + L1 LINE L1 2771 3425 -2721 1730 260 135 31 chr2 55886340 55887652 -194800202 + L1M4 LINE L1 2497 3944 -2202 1292 152 117 42 chr2 55887665 55887974 -194799880 - THE1C LTR MaLR -43 332 1 282 245 59 29 chr2 55888010 55888112 -194799742 + L1M4 LINE L1 3974 4078 -2068 421 321 49 0 chr2 55888142 55888304 -194799550 + L2 LINE L2 2151 2320 -994 1183 276 115 34 chr2 55888325 55889096 -194798758 + L2 LINE L2 2465 3313 0 27 29 0 0 chr2 55889337 55889371 -194798483 + AT_rich Low_complexity Low_complexity 1 34 0 1930 144 16 7 chr2 55889371 55889677 -194798177 + AluSx SINE Alu 1 309 -3 1070 249 156 7 chr2 55889880 55890285 -194797569 - L1ME2 LINE L1 -9 6155 5691 4323 195 36 42 chr2 55890287 55890847 -194797007 - L1MB8 LINE L1 0 6178 5616 745 100 0 0 chr2 55890847 55890957 -194796897 - L1PB1 LINE L1 -1 6150 6041 4323 195 36 42 chr2 55890957 55892414 -194795440 - L1MB8 LINE L1 -562 5616 4171 1436 271 50 41 chr2 55892431 55892885 -194794969 - L1ME2 LINE L1 -473 5691 5243 2361 81 0 0 chr2 55892885 55893180 -194794674 + AluY SINE Alu 1 295 -16 1436 271 50 41 chr2 55893180 55893713 -194794141 - L1ME2 LINE L1 -921 5243 4692 1758 125 21 0 chr2 55893732 55894020 -194793834 - L1MA6 LINE L1 -3 6297 6004 241 127 48 79 chr2 55894028 55894091 -194793763 + L1MA4 LINE L1 5297 5357 -943 3176 109 11 4 chr2 55894099 55894567 -194793287 - L1PA13 LINE L1 -50 6113 5643 9926 168 17 21 chr2 55894674 55895634 -194792220 - L1PA13 LINE L1 -520 5648 4685 2354 100 0 3 chr2 55895634 55895944 -194791910 + AluY SINE Alu 1 309 -2 9926 168 17 21 chr2 55895944 55897230 -194790624 - L1PA13 LINE L1 -1483 4685 3417 4576 145 95 1 chr2 55897235 55898106 -194789748 + L1MA4 LINE L1 5343 6295 -5 1882 139 7 105 chr2 55898101 55898519 -194789335 + L1MA7 LINE L1 5601 5977 -314 * 1605 263 89 39 chr2 55898512 55899626 -194788228 - L1 LINE L1 -1424 4722 3542 * 270 292 175 13 chr2 55899671 55899825 -194788029 - L1MEc LINE L1 -6138 258 80 35 0 0 0 chr2 55899885 55899920 -194787934 + AT_rich Low_complexity Low_complexity 1 35 0 5901 149 23 12 chr2 55900848 55902558 -194785296 - L1MA4 LINE L1 -1 6299 4570 884 159 6 6 chr2 55902555 55902725 -194785129 - L1MA4 LINE L1 -2325 3821 3652 * 1621 282 101 55 chr2 55904886 55906179 -194781675 + HAL1 LINE L1 604 1956 -551 21 57 0 0 chr2 55906182 55906217 -194781637 + AT_rich Low_complexity Low_complexity 1 35 0 1361 134 4 60 chr2 55906272 55906540 -194781314 - L1MA5 LINE L1 -1 6299 6047 3129 168 43 2 chr2 55906622 55907207 -194780647 - L1MA5 LINE L1 -248 6052 5444 1055 167 10 10 chr2 55907199 55907397 -194780457 + L1PBa LINE L1 3 200 -6663 * 2081 112 9 25 chr2 55907397 55907718 -194780136 + L1PBa LINE L1 634 949 -5914 29 90 0 0 chr2 55908023 55908101 -194779753 + AT_rich Low_complexity Low_complexity 1 78 0 3136 205 4 10 chr2 55908190 55908891 -194778963 + L1 LINE L1 4271 4967 -1179 5057 35 0 0 chr2 55908913 55909517 -194778337 - L1PA3 LINE L1 0 6155 5552 943 286 63 26 chr2 55909535 55910042 -194777812 + L1ME3A LINE L1 5425 5950 -220 4341 134 25 91 chr2 55910260 55911747 -194776107 + pTR5 LTR ERV1 743 2606 0 2290 100 0 0 chr2 55911778 55912077 -194775777 + AluSp SINE Alu 2 300 -13 237 292 139 0 chr2 55912598 55912670 -194775184 + L2 LINE L2 3232 3313 0 578 168 25 0 chr2 55913138 55913257 -194774597 - L1MB7 LINE L1 -12 6670 6549 1998 211 45 24 chr2 55913264 55914998 -194772856 - L1MB7 LINE L1 -321 6361 4458 885 202 122 4 chr2 55915002 55915264 -194772590 - L1MB7 LINE L1 -2081 4563 4271 497 266 72 59 chr2 55915550 55915772 -194772082 - L1MB7 LINE L1 -6304 238 14 188 222 0 0 chr2 55915919 55915964 -194771890 - L2 LINE L2 0 3313 3269 617 314 38 8 chr2 55917114 55917375 -194770479 - MLT1L LTR MaLR 0 615 347 229 283 50 25 chr2 55917935 55918055 -194769799 + L1ME LINE L1 5570 5692 -429 2450 118 27 0 chr2 55918083 55918448 -194769406 - THE1C LTR MaLR 0 375 1 242 296 61 31 chr2 55918910 55919008 -194768846 - MIR SINE MIR -110 152 52 2304 97 0 0 chr2 55919961 55920251 -194767603 + AluSg SINE Alu 5 294 -16 857 223 44 18 chr2 55921599 55921828 -194766026 - MLT1C LTR MaLR -46 421 187 341 284 173 23 chr2 55922660 55923104 -194764750 + L1MC/D LINE L1 5298 5790 -331 1504 189 35 21 chr2 55923237 55923523 -194764331 + AluJo SINE Alu 1 290 -22 198 0 0 0 chr2 55925475 55925497 -194762357 + (A)n Simple_repeat Simple_repeat 1 22 0 2326 98 0 7 chr2 55925497 55925802 -194762052 + AluSg SINE Alu 1 303 -7 900 144 0 8 chr2 55926403 55926535 -194761319 + FLAM_C SINE Alu 1 131 -12 180 0 0 0 chr2 55926822 55926842 -194761012 + (TTG)n Simple_repeat Simple_repeat 2 21 0 299 234 65 13 chr2 55928615 55928692 -194759162 + MIR SINE MIR 29 109 -99 198 276 123 55 chr2 55928944 55929107 -194758747 - L2 LINE L2 -43 3270 3097 2006 147 10 0 chr2 55929158 55929470 -194758384 - L1PA13 LINE L1 -1907 4239 3925 1891 171 0 3 chr2 55929466 55929823 -194758031 + L1PA13 LINE L1 4228 4583 -1563 * 929 80 7 0 chr2 55929826 55929964 -194757890 + L1P4 LINE L1 5316 5454 -707 6192 94 2 1 chr2 55929964 55931531 -194756323 + L1PA13 LINE L1 4584 6144 -19 1003 233 18 5 chr2 55931540 55931759 -194756095 + MIR SINE MIR 20 241 -21 1977 121 16 13 chr2 55932399 55932705 -194755149 - AluSx SINE Alu -5 307 1 4616 201 98 28 chr2 55933434 55933611 -194754243 - Charlie1a DNA MER1_type -1576 1185 1022 3169 131 27 2 chr2 55933611 55934092 -194753762 + LTR42 LTR ERVL 3 495 0 4616 201 98 28 chr2 55934092 55935021 -194752833 - Charlie1a DNA MER1_type -1739 1022 1 180 0 0 0 chr2 55935125 55935145 -194752709 + (A)n Simple_repeat Simple_repeat 1 20 0 183 200 29 0 chr2 55935663 55935698 -194752156 + L2 LINE L2 3188 3223 -90 26 0 0 0 chr2 55935718 55935744 -194752110 + AT_rich Low_complexity Low_complexity 1 26 0 551 154 32 41 chr2 55935820 55935943 -194751911 + MLT1C LTR MaLR 1 122 -345 243 306 120 6 chr2 55936231 55936414 -194751440 + L1M4 LINE L1 4126 4329 -1817 * 4271 180 25 1 chr2 55936413 55937206 -194750648 + L1MB2 LINE L1 5358 6169 -2 263 149 0 0 chr2 55937251 55937298 -194750556 + L1ME3 LINE L1 5908 5954 -216 301 257 35 56 chr2 55937333 55937477 -194750377 + L1ME3 LINE L1 5934 6074 -88 271 374 38 15 chr2 55937798 55937929 -194749925 - L2 LINE L2 -5 3267 3134 329 298 21 50 chr2 55938328 55938469 -194749385 + MIR3 SINE MIR 69 205 -3 238 387 60 0 chr2 55938709 55938859 -194748995 - MIR SINE MIR -43 219 61 1542 36 10 0 chr2 55939501 55939693 -194748161 + L1PA4 LINE L1 5961 6154 -1 760 207 0 7 chr2 55939893 55940043 -194747811 - MER5A DNA MER1_type 0 189 41 673 307 17 42 chr2 55940295 55940533 -194747321 - MIR SINE MIR -10 252 21 7082 101 9 28 chr2 55941192 55942283 -194745571 - MER11C LTR ERVK 0 1071 1 252 0 0 0 chr2 55942753 55942781 -194745073 + (A)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr2 55943082 55943105 -194744749 + AT_rich Low_complexity Low_complexity 1 23 0 2706 243 64 61 chr2 55943637 55945060 -194742794 + L1MDa LINE L1 20 1619 -4921 3210 113 23 2 chr2 55945061 55945538 -194742316 + LTR15 LTR ERV1 1 487 -6 1962 180 41 0 chr2 55945558 55945974 -194741880 + L1MDa LINE L1 1621 2053 -4487 1383 216 27 106 chr2 55945991 55946436 -194741418 + MLT1D-int LTR MaLR 962 1371 0 1803 238 27 49 chr2 55946436 55946948 -194740906 + MLT1D LTR MaLR 1 501 -4 911 180 84 24 chr2 55946957 55947207 -194740647 + L1MDa LINE L1 2077 2341 -4199 264 30 0 0 chr2 55947251 55947284 -194740570 + (TA)n Simple_repeat Simple_repeat 2 34 0 9830 228 50 20 chr2 55947285 55950891 -194736963 + L1MDa LINE L1 2342 6037 -599 3771 162 39 4 chr2 55950891 55951612 -194736242 + L1MB2 LINE L1 5419 6164 -7 742 199 21 47 chr2 55951773 55952170 -194735684 + MER4C LTR ERV1 149 435 -30 207 0 0 0 chr2 55952559 55952582 -194735272 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 9007 16 0 0 chr2 55952627 55953661 -194734193 - L1HS LINE L1 -1150 4996 3963 7977 11 0 1 chr2 55953660 55954835 -194733019 + L1HS LINE L1 4982 6155 0 * 23 33 0 0 chr2 55954840 55954870 -194732984 + AT_rich Low_complexity Low_complexity 1 30 0 1861 274 76 40 chr2 55955793 55956820 -194731034 - L2 LINE L2 0 3313 2259 205 382 53 34 chr2 55956984 55957191 -194730663 + L2 LINE L2 2683 2893 -421 308 269 37 90 chr2 55957340 55957371 -194730483 + L2 LINE L2 3146 3177 -95 1720 192 99 32 chr2 55957371 55957844 -194730010 - MLT1D LTR MaLR 0 505 1 308 269 37 90 chr2 55957844 55957946 -194729908 + L2 LINE L2 3177 3272 0 2134 203 56 34 chr2 55958015 55958553 -194729301 + MER44D DNA MER2_type 1 605 0 1496 262 40 19 chr2 55959079 55959502 -194728352 + MLT1J LTR MaLR 80 511 0 1011 247 40 4 chr2 55959630 55959881 -194727973 - MLT1G1 LTR MaLR -317 278 19 1274 274 89 13 chr2 55960438 55960912 -194726942 + MLT1J LTR MaLR 2 511 0 535 297 8 8 chr2 55961779 55961907 -194725947 + L2 LINE L2 3141 3268 -4 216 0 0 0 chr2 55962145 55962169 -194725685 + (A)n Simple_repeat Simple_repeat 1 24 0 375 278 144 6 chr2 55962282 55962455 -194725399 - MIR SINE MIR -13 249 53 241 265 221 37 chr2 55962887 55963023 -194724831 - MIR3 SINE MIR -10 198 38 197 308 0 0 chr2 55963071 55963123 -194724731 - L2 LINE L2 -832 2482 2431 1861 262 84 20 chr2 55963203 55963753 -194724101 + MLT1E LTR MaLR 1 585 -8 2292 104 0 0 chr2 55964148 55964455 -194723399 + AluY SINE Alu 1 307 -4 17725 67 10 1 chr2 55964918 55967205 -194720649 + L1PA5 LINE L1 11 2318 -3828 6986 48 12 2 chr2 55967193 55968706 -194719148 + L1PA5 LINE L1 4628 6154 0 * 768 102 15 51 chr2 55968708 55968845 -194719009 + THE1B LTR MaLR 171 302 -62 4570 152 81 14 chr2 55969029 55969994 -194717860 - L1MA9 LINE L1 0 6312 5283 1901 166 45 21 chr2 55970183 55970562 -194717292 + MLT1B LTR MaLR 2 389 -1 877 170 66 39 chr2 55971393 55971620 -194716234 - MLT2C2 LTR ERVL -2 462 129 4074 163 37 12 chr2 55971634 55972438 -194715416 - L1PA15 LINE L1 0 6165 5342 893 181 6 44 chr2 55972752 55972934 -194714920 - MLT2C1 LTR ERVL -94 303 129 13961 225 33 39 chr2 55972948 55977739 -194710115 - L1PA15 LINE L1 0 7603 2786 463 110 41 0 chr2 55977739 55977812 -194710042 - MADE1 DNA Mariner -2 78 3 13961 225 33 39 chr2 55977812 55979243 -194708611 - L1PA15 LINE L1 -4817 2786 909 4202 76 28 0 chr2 55979243 55979807 -194708047 - LTR19B LTR ERV1 0 580 1 13961 225 33 39 chr2 55979807 55980703 -194707151 - L1PA15 LINE L1 -6694 909 9 664 145 38 8 chr2 55980718 55980849 -194707005 - MLT2C2 LTR ERVL -329 135 1 2084 94 3 58 chr2 55981549 55981858 -194705996 + AluSp SINE Alu 1 292 -21 1466 219 72 19 chr2 55982104 55982537 -194705317 + MLT1C LTR MaLR 5 460 -7 188 238 16 0 chr2 55982739 55982802 -194705052 + (TTG)n Simple_repeat Simple_repeat 2 65 0 27 22 0 22 chr2 55983132 55983158 -194704696 + AT_rich Low_complexity Low_complexity 1 27 -17 1717 187 3 3 chr2 55983158 55983447 -194704407 + AluJo SINE Alu 1 289 -23 27 22 0 22 chr2 55983447 55983465 -194704389 + AT_rich Low_complexity Low_complexity 27 44 0 318 255 9 53 chr2 55984303 55984419 -194703435 + MLT1I LTR MaLR 77 220 -235 266 271 51 25 chr2 55985405 55985523 -194702331 + LTR67 LTR ERVL 427 547 -10 1018 314 35 25 chr2 55986705 55987100 -194700754 - L2 LINE L2 0 3313 2915 2204 143 25 3 chr2 55987294 55987650 -194700204 - THE1B LTR MaLR 0 364 1 2499 148 57 0 chr2 55987700 55988105 -194699749 + MSTA LTR MaLR 1 428 0 290 319 162 11 chr2 55988107 55988292 -194699562 + L2 LINE L2 2293 2505 -809 201 390 37 0 chr2 55989018 55989100 -194698754 + MIR SINE MIR 1 85 -177 287 271 14 0 chr2 55989418 55989488 -194698366 - MIR SINE MIR -63 145 75 210 208 38 0 chr2 55989482 55989535 -194698319 - MIR SINE MIR -104 158 104 * 207 313 91 30 chr2 55991605 55991704 -194696150 - L2 LINE L2 -21 3251 3147 1838 180 6 3 chr2 55992911 55993222 -194694632 + AluJo SINE Alu 1 312 0 188 232 18 54 chr2 55993807 55993863 -194693991 - MIR SINE MIR -5 257 204 270 267 168 25 chr2 55995105 55995266 -194692588 - L2 LINE L2 -4 3309 3126 743 284 29 22 chr2 55995534 55995847 -194692007 - LTR16A LTR ERVL -84 366 52 251 288 0 12 chr2 55996217 55996297 -194691557 - MARNA DNA Mariner -26 560 482 433 289 142 16 chr2 55996424 55996614 -194691240 + MIR SINE MIR 49 262 0 1068 159 49 0 chr2 55996701 55996927 -194690927 - L1MC3 LINE L1 0 7785 7549 23 54 0 0 chr2 55997432 55997469 -194690385 + AT_rich Low_complexity Low_complexity 1 37 0 1491 136 25 2 chr2 55998319 55998599 -194689255 + MER1B DNA MER1_type 1 339 0 2566 145 44 8 chr2 55999017 55999513 -194688341 - L1MB1 LINE L1 -284 5884 5371 2801 159 32 31 chr2 55999513 56000171 -194687683 + MER39B LTR ERV1 1 707 0 375 163 0 12 chr2 56000175 56000261 -194687593 - L1MB1 LINE L1 -813 5370 5286 * 1248 167 46 69 chr2 56000253 56000325 -194687529 + L1MB1 LINE L1 5870 5942 -226 2032 118 28 0 chr2 56000325 56000613 -194687241 + AluSx SINE Alu 1 296 -16 1248 167 46 69 chr2 56000613 56000845 -194687009 + L1MB1 LINE L1 5942 6167 -1 246 319 66 0 chr2 56002066 56002157 -194685697 + MIR SINE MIR 94 190 -72 194 322 122 0 chr2 56002578 56002668 -194685186 + MIR SINE MIR 127 227 -35 206 178 0 22 chr2 56004918 56004963 -194682891 + T-rich Low_complexity Low_complexity 2 45 0 364 234 140 0 chr2 56005378 56005485 -194682369 + MIR SINE MIR 92 213 -49 38 0 0 0 chr2 56005494 56005532 -194682322 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 56006255 56006276 -194681578 + AT_rich Low_complexity Low_complexity 1 21 0 693 216 81 37 chr2 56007181 56007245 -194680609 - L1ME1 LINE L1 -4 6162 6102 306 0 0 0 chr2 56007245 56007279 -194680575 + (TA)n Simple_repeat Simple_repeat 1 34 0 693 216 81 37 chr2 56007279 56007487 -194680367 - L1ME1 LINE L1 -64 6102 5878 212 390 9 0 chr2 56008616 56008721 -194679133 + MIR3 SINE MIR 87 192 -16 515 197 284 0 chr2 56009406 56009533 -194678321 - MER5A DNA MER1_type 0 189 27 568 242 6 31 chr2 56009609 56009770 -194678084 - MIR SINE MIR -1 261 105 255 324 46 19 chr2 56009910 56010018 -194677836 + L3 LINE CR1 885 995 -582 213 39 0 0 chr2 56010170 56010196 -194677658 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 239 274 0 0 chr2 56010259 56010321 -194677533 - MLT1J1 LTR MaLR -53 393 332 2320 163 58 7 chr2 56010380 56010815 -194677039 - LTR32 LTR ERVL 0 471 15 274 283 42 25 chr2 56010817 56010937 -194676917 - HERVL32 LTR ERVL 0 3418 3297 2251 102 19 40 chr2 56011122 56011494 -194676360 - THE1B LTR MaLR 0 364 1 2486 133 19 19 chr2 56012358 56012780 -194675074 - LTR32 LTR ERVL -35 436 15 675 257 83 20 chr2 56012767 56013020 -194674834 - MLT1J2 LTR MaLR -181 269 1 * 898 311 124 39 chr2 56013030 56013667 -194674187 + L2 LINE L2 489 1179 -2135 755 263 32 5 chr2 56013746 56013963 -194673891 + MER58A DNA MER1_type 1 223 -1 513 121 0 50 chr2 56014142 56014239 -194673615 + MLT1A1 LTR MaLR 2 93 -272 1324 174 148 44 chr2 56014239 56014292 -194673562 + MSTC LTR MaLR 1 47 -381 1899 198 70 32 chr2 56014292 56014732 -194673122 + MSTB2 LTR MaLR 1 457 0 1324 174 148 44 chr2 56014732 56015064 -194672790 + MSTC LTR MaLR 47 426 -2 1359 175 14 36 chr2 56015069 56015143 -194672711 + MLT1A1 LTR MaLR 92 166 -199 1878 140 79 25 chr2 56015143 56015499 -194672355 - THE1C LTR MaLR 0 375 1 1359 175 14 36 chr2 56015499 56015704 -194672150 + MLT1A1 LTR MaLR 166 365 0 247 311 117 27 chr2 56015808 56015964 -194671890 - MIR3 SINE MIR -79 129 3 1728 190 18 3 chr2 56017024 56017350 -194670504 + MLT1A1 LTR MaLR 23 353 -12 257 273 60 80 chr2 56017455 56017605 -194670249 + L2 LINE L2 3122 3268 -4 204 125 0 0 chr2 56019164 56019196 -194668658 + (GAA)n Simple_repeat Simple_repeat 2 33 0 1053 177 41 45 chr2 56020054 56020274 -194667580 - MER20 DNA MER1_type 0 219 1 1521 173 85 23 chr2 56020323 56020630 -194667224 - MER89 LTR ERV1 -2 557 232 1953 180 47 110 chr2 56020679 56021217 -194666637 - MLT1D LTR MaLR 0 505 2 789 217 51 0 chr2 56021230 56021387 -194666467 + MER5A DNA MER1_type 11 175 -14 863 99 9 4 chr2 56021582 56021714 -194666140 + MLT2B1 LTR ERVL 1 129 -285 338 100 0 0 chr2 56021724 56021774 -194666080 + MLT2B1 LTR ERVL 460 509 -11 1788 241 99 6 chr2 56021923 56022338 -194665516 + MLT2B1 LTR ERVL 1 467 -53 195 42 0 0 chr2 56022338 56022362 -194665492 + (TAGG)n Simple_repeat Simple_repeat 1 24 0 1788 241 99 6 chr2 56022362 56022420 -194665434 + MLT2B1 LTR ERVL 467 518 -2 287 234 11 32 chr2 56022519 56022613 -194665241 - MER112 DNA MER1_type -104 156 65 2157 135 0 0 chr2 56022654 56022965 -194664889 + AluSq SINE Alu 1 311 -2 324 100 0 43 chr2 56022969 56023039 -194664815 + (GAA)n Simple_repeat Simple_repeat 3 69 0 226 359 26 52 chr2 56023182 56023374 -194664480 + L2 LINE L2 3127 3313 0 1171 217 33 84 chr2 56024155 56024546 -194663308 - MLT1A2 LTR MaLR 0 374 4 374 259 69 30 chr2 56024817 56024948 -194662906 - L2 LINE L2 0 3272 3137 761 249 6 0 chr2 56024980 56025157 -194662697 - MER115 DNA AcHobo -9 684 507 600 217 47 0 chr2 56025186 56025315 -194662539 - MER115 DNA AcHobo -246 447 313 277 284 0 0 chr2 56025532 56025620 -194662234 + G-rich Low_complexity Low_complexity 1 88 0 761 249 6 0 chr2 56025727 56025904 -194661950 - MER115 DNA AcHobo -9 684 507 600 217 47 0 chr2 56025933 56026062 -194661792 - MER115 DNA AcHobo -246 447 313 531 286 87 0 chr2 56026206 56026367 -194661487 - MER5A DNA MER1_type 0 189 15 189 306 0 0 chr2 56026514 56026563 -194661291 - L2 LINE L2 -13 3259 3211 247 250 135 29 chr2 56026923 56027027 -194660827 + L1ME LINE L1 137 251 -5954 195 285 208 15 chr2 56027145 56027275 -194660579 - MIR3 SINE MIR -39 169 15 1813 163 18 31 chr2 56028741 56028854 -194659000 + MER67D LTR ERV1 3 116 -398 1783 164 10 13 chr2 56028854 56029152 -194658702 + AluJo SINE Alu 1 297 -15 1813 163 18 31 chr2 56029152 56029364 -194658490 + MER67D LTR ERV1 116 324 -190 307 172 155 75 chr2 56030498 56030672 -194657182 - L1ME4a LINE L1 -67 6054 5867 1450 162 42 71 chr2 56030690 56030999 -194656855 - AluJo SINE Alu -12 300 1 225 194 0 97 chr2 56032555 56032627 -194655227 + L1ME LINE L1 1313 1377 -5019 450 284 39 0 chr2 56032667 56032769 -194655085 + L2 LINE L2 3148 3253 -19 192 152 0 0 chr2 56032782 56032815 -194655039 + GA-rich Low_complexity Low_complexity 4 36 0 489 237 40 0 chr2 56032907 56033059 -194654795 - HAL1b LINE L1 -7 1341 1184 2099 114 0 17 chr2 56033488 56033785 -194654069 + AluSg1 SINE Alu 1 292 -17 581 273 93 44 chr2 56034639 56034844 -194653010 + MER58C DNA MER1_type 1 215 0 240 35 0 0 chr2 56034865 56034894 -194652960 + (CA)n Simple_repeat Simple_repeat 2 30 0 608 271 73 20 chr2 56034937 56035184 -194652670 + MIR SINE MIR 3 262 0 935 237 78 0 chr2 56036322 56036554 -194651300 + MIR SINE MIR 8 257 -5 1517 147 54 19 chr2 56037214 56037527 -194650327 + MER33 DNA MER1_type 1 324 0 21 71 0 0 chr2 56037717 56037759 -194650095 + AT_rich Low_complexity Low_complexity 1 42 0 1312 69 0 17 chr2 56038111 56038284 -194649570 - L1PA4 LINE L1 0 6155 5986 3888 20 0 0 chr2 56038284 56038723 -194649131 + L1PA4 LINE L1 5459 5897 -258 2343 88 10 0 chr2 56039093 56039398 -194648456 + AluY SINE Alu 2 309 -2 4252 137 6 20 chr2 56040002 56040646 -194647208 + MER41B LTR ERV1 1 635 0 361 244 163 15 chr2 56040682 56040817 -194647037 - MER5A DNA MER1_type 0 189 35 2763 185 27 55 chr2 56040944 56041505 -194646349 + MLT2B3 LTR ERVL 1 545 -9 203 189 0 0 chr2 56042133 56042170 -194645684 + A-rich Low_complexity Low_complexity 1 37 0 307 171 37 33 chr2 56042371 56042445 -194645409 + MLT1B LTR MaLR 1 83 -282 4894 128 157 104 chr2 56042578 56043784 -194644070 + pTR5 LTR ERV1 1170 2438 0 1641 195 15 21 chr2 56043785 56044119 -194643735 + MLT1B LTR MaLR 55 386 -4 26 0 0 0 chr2 56044905 56044931 -194642923 + AT_rich Low_complexity Low_complexity 1 26 0 616 234 23 8 chr2 56045100 56045228 -194642626 - MER5A DNA MER1_type 0 189 60 628 216 56 8 chr2 56045229 56045354 -194642500 + FLAM_C SINE Alu 3 133 -10 1755 163 7 20 chr2 56045365 56045666 -194642188 - AluJo SINE Alu -15 297 1 2419 79 0 0 chr2 56045677 56045980 -194641874 - AluY SINE Alu -8 303 1 260 111 33 233 chr2 56045981 56046071 -194641783 - MER5A DNA MER1_type -114 75 4 924 283 151 49 chr2 56046189 56046865 -194640989 + HAL1 LINE L1 138 882 -1625 723 218 87 24 chr2 56046869 56047075 -194640779 - LTR18B LTR ERVL -13 601 383 801 254 65 20 chr2 56047140 56047341 -194640513 - LTR18A LTR ERVL -147 210 1 1140 163 0 96 chr2 56047632 56047871 -194639983 + MER20 DNA MER1_type 1 216 -3 4233 103 47 18 chr2 56047969 56048648 -194639206 + L1PA16 LINE L1 5300 5998 -168 542 183 96 19 chr2 56048825 56048977 -194638877 - MLT-int LTR MaLR -946 425 279 636 274 41 5 chr2 56049168 56049365 -194638489 + MIR SINE MIR 50 253 -9 885 206 21 21 chr2 56049652 56049841 -194638013 - MER5A DNA MER1_type 0 189 1 274 239 15 0 chr2 56050618 56050685 -194637169 + (TG)n Simple_repeat Simple_repeat 2 69 0 797 334 176 15 chr2 56050853 56052085 -194635769 + L2 LINE L2 1828 3270 -2 425 306 92 49 chr2 56052444 56052888 -194634966 + L2 LINE L2 2766 3226 -46 591 245 48 0 chr2 56053323 56053470 -194634384 + MER103 DNA DNA 13 166 0 184 43 0 0 chr2 56054604 56054627 -194633227 - MIR SINE MIR -8 254 232 206 265 0 0 chr2 56055416 56055465 -194632389 - MIR SINE MIR -106 156 108 1602 157 18 102 chr2 56056996 56057188 -194630666 - MLT1B LTR MaLR -12 378 232 2193 121 0 0 chr2 56057188 56057485 -194630369 - AluSg SINE Alu -13 297 1 1602 157 18 102 chr2 56057485 56057674 -194630180 - MLT1B LTR MaLR -158 232 29 2975 30 3 0 chr2 56057733 56058066 -194629788 - L1PA4 LINE L1 0 6155 5822 353 305 64 14 chr2 56058127 56058268 -194629586 + MIR3 SINE MIR 54 201 -7 222 336 26 18 chr2 56058957 56059070 -194628784 + MIR SINE MIR 85 198 -64 300 198 81 58 chr2 56059824 56059910 -194627944 - MER5B DNA MER1_type -74 104 17 182 62 31 0 chr2 56059912 56059944 -194627910 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 235 287 148 0 chr2 56060340 56060462 -194627392 + L2 LINE L2 2911 3050 -222 193 372 32 0 chr2 56060502 56060596 -194627258 + L2 LINE L2 3205 3301 -12 2596 160 14 9 chr2 56061069 56061562 -194626292 - LTR32 LTR ERVL -1 470 15 233 196 0 0 chr2 56061602 56061648 -194626206 - L2 LINE L2 0 3313 3268 556 234 19 25 chr2 56062014 56062172 -194625682 + MER58B DNA MER1_type 176 332 -9 344 281 114 9 chr2 56062411 56062525 -194625329 - MIR SINE MIR -79 183 58 2131 115 14 0 chr2 56063465 56063752 -194624102 + AluSx SINE Alu 1 291 -21 1408 143 90 50 chr2 56064218 56064540 -194623314 - THE1C LTR MaLR -40 335 1 2414 55 0 19 chr2 56064675 56064983 -194622871 - AluY SINE Alu -9 302 1 383 224 8 90 chr2 56065825 56065959 -194621895 - MIR SINE MIR -119 143 21 310 152 11 163 chr2 56066440 56066478 -194621376 - MER96 DNA MER1_type? 0 175 157 2231 107 0 7 chr2 56066478 56066778 -194621076 + AluSq SINE Alu 1 298 -15 310 152 11 163 chr2 56066778 56066831 -194621023 - MER96 DNA MER1_type? -18 157 98 312 298 114 9 chr2 56067692 56067806 -194620048 + MIR SINE MIR 58 183 -79 291 256 147 23 chr2 56068302 56068431 -194619423 + MLT1L LTR MaLR 471 615 0 422 341 123 38 chr2 56068847 56069181 -194618673 + L2 LINE L2 2215 2519 -795 1775 194 0 3 chr2 56069181 56069490 -194618364 - AluJb SINE Alu -4 308 1 422 341 123 38 chr2 56069490 56069765 -194618089 + L2 LINE L2 2519 2876 -438 1990 115 29 4 chr2 56069985 56070264 -194617590 + AluJb SINE Alu 10 295 -17 208 240 142 74 chr2 56070882 56071083 -194616771 - MIR3 SINE MIR -44 218 6 196 235 0 78 chr2 56072113 56072164 -194615690 - L2 LINE L2 -2 3270 3224 329 284 14 54 chr2 56073874 56073900 -194613954 - MIR SINE MIR -10 252 226 2295 96 0 10 chr2 56073900 56074203 -194613651 + AluSq SINE Alu 1 300 -13 329 284 14 54 chr2 56074203 56074324 -194613530 - MIR SINE MIR -36 226 111 376 277 40 5 chr2 56074391 56074593 -194613261 + L1ME4a LINE L1 5697 5905 -216 262 224 15 30 chr2 56074594 56074661 -194613193 + GA-rich Low_complexity Low_complexity 4 69 0 2177 108 3 0 chr2 56074670 56074966 -194612888 + AluSg SINE Alu 1 297 -13 265 265 0 0 chr2 56075001 56075084 -194612770 + L1MA10 LINE L1 6250 6332 -2 330 233 163 23 chr2 56075256 56075342 -194612512 - MER5B DNA MER1_type -78 100 3 2363 88 0 0 chr2 56076821 56077117 -194610737 + AluSq SINE Alu 1 296 -17 434 268 71 71 chr2 56077919 56078173 -194609681 - MLT1J LTR MaLR -26 485 232 439 269 22 15 chr2 56078214 56078348 -194609506 - MLT1J LTR MaLR -376 135 1 258 284 0 14 chr2 56078943 56079017 -194608837 - MIR SINE MIR 0 262 190 255 122 0 0 chr2 56079116 56079157 -194608697 + MLT1A1 LTR MaLR 252 292 -73 * 705 217 20 69 chr2 56079153 56079414 -194608440 - MLT1A2 LTR MaLR -130 260 12 304 269 0 13 chr2 56079416 56079494 -194608360 - MIR SINE MIR -94 168 92 720 268 91 49 chr2 56079811 56080054 -194607800 - MIR SINE MIR 0 262 10 4927 258 74 46 chr2 56081872 56083329 -194604525 + HAL1 LINE L1 2 1417 -1090 1842 157 4 7 chr2 56083329 56083610 -194604244 + AluSx SINE Alu 1 280 -32 288 0 0 0 chr2 56083610 56083642 -194604212 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 4927 258 74 46 chr2 56083642 56083938 -194603916 + HAL1 LINE L1 1417 1703 -804 2380 92 0 3 chr2 56083938 56084244 -194603610 + AluY SINE Alu 1 305 -6 4927 258 74 46 chr2 56084244 56084920 -194602934 + HAL1 LINE L1 1703 2501 -6 388 257 140 45 chr2 56084990 56085212 -194602642 - MIR SINE MIR 0 262 20 299 379 29 73 chr2 56085247 56085561 -194602293 + L2 LINE L2 2918 3217 -55 207 0 0 0 chr2 56085814 56085837 -194602017 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2231 126 26 19 chr2 56086252 56086674 -194601180 + Tigger2 DNA MER2_type 1 425 -2293 2237 105 0 3 chr2 56086674 56086969 -194600885 - AluSg SINE Alu -16 294 1 6493 117 43 1 chr2 56086992 56088020 -194599834 + Tigger2 DNA MER2_type 618 1688 -1030 2043 69 0 0 chr2 56088042 56088303 -194599551 - L1PA7 LINE L1 -4 6150 5890 417 208 38 0 chr2 56088450 56088556 -194599298 - L1PA6 LINE L1 -1 6153 6044 507 67 0 67 chr2 56088556 56088646 -194599208 - L1PA12 LINE L1 -107 6061 5978 26 30 0 0 chr2 56089031 56089064 -194598790 + AT_rich Low_complexity Low_complexity 1 33 0 2008 123 10 3 chr2 56089180 56089481 -194598373 - AluSg SINE Alu -7 303 1 1612 164 24 3 chr2 56089508 56089800 -194598054 + AluSx SINE Alu 4 301 -11 21 36 0 0 chr2 56091112 56091140 -194596714 + AT_rich Low_complexity Low_complexity 1 28 0 327 167 42 0 chr2 56091142 56091214 -194596640 - MER72 LTR ERV1 -63 659 585 2304 94 0 3 chr2 56091226 56091525 -194596329 - AluSx SINE Alu -14 298 1 294 143 0 0 chr2 56091535 56091591 -194596263 - L1MA4A LINE L1 -23 6280 6225 1569 175 10 42 chr2 56092276 56092585 -194595269 + AluJo SINE Alu 1 299 -13 2112 107 7 16 chr2 56093614 56093922 -194593932 + AluSx SINE Alu 1 305 -7 502 174 61 0 chr2 56093937 56094035 -194593819 + MER93b LTR ERV1 12 115 -258 5016 143 43 9 chr2 56094039 56095088 -194592766 - L1MA7 LINE L1 0 6291 5201 462 249 32 75 chr2 56095090 56095191 -194592663 + MER93b LTR ERV1 105 209 -164 2246 125 0 0 chr2 56095191 56095486 -194592368 - AluJb SINE Alu -17 295 1 462 249 32 75 chr2 56095486 56095665 -194592189 + MER93b LTR ERV1 209 373 0 248 272 95 41 chr2 56096084 56096231 -194591623 - L2 LINE L2 -25 3288 3134 1637 209 7 0 chr2 56096251 56096552 -194591302 + AluJo SINE Alu 5 307 -5 409 247 0 0 chr2 56096647 56096732 -194591122 - MIR SINE MIR 0 262 178 260 200 0 0 chr2 56096777 56096822 -194591032 - MIR SINE MIR -12 250 206 1940 142 7 17 chr2 56096876 56097178 -194590676 + AluJb SINE Alu 1 299 -13 2125 111 3 7 chr2 56097247 56097545 -194590309 - AluSp SINE Alu -15 298 2 1037 171 0 17 chr2 56097706 56097956 -194589898 + AluJb SINE Alu 1 310 0 1823 135 53 4 chr2 56098543 56098824 -194589030 - AluSq SINE Alu -18 295 1 700 292 129 28 chr2 56099179 56099744 -194588110 + HAL1 LINE L1 1251 1872 -635 999 128 29 12 chr2 56099986 56100158 -194587696 + MER4B LTR ERV1 432 606 -4 1995 200 24 24 chr2 56100167 56100632 -194587222 - MLT1C LTR MaLR -2 465 1 679 257 284 12 chr2 56100632 56101110 -194586744 + L2 LINE L2 2651 3279 -34 2068 116 13 7 chr2 56101313 56101616 -194586238 + AluSx SINE Alu 1 305 -7 269 26 26 0 chr2 56102874 56102912 -194584942 + (TCC)n Simple_repeat Simple_repeat 3 41 0 225 0 0 0 chr2 56104118 56104143 -194583711 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 1630 170 21 3 chr2 56104144 56104433 -194583421 - AluJo SINE Alu -6 306 13 2267 116 0 0 chr2 56104861 56105163 -194582691 + AluSg SINE Alu 1 302 -8 755 206 8 0 chr2 56105175 56105306 -194582548 - FAM SINE Alu -53 132 1 2093 127 10 0 chr2 56105483 56105775 -194582079 + AluSq SINE Alu 1 295 -18 1071 141 0 0 chr2 56105819 56105975 -194581879 - AluSg/x SINE Alu -24 288 133 21 71 0 0 chr2 56105978 56106020 -194581834 + AT_rich Low_complexity Low_complexity 1 42 0 385 247 60 13 chr2 56106245 56106395 -194581459 + L1MC5 LINE L1 6960 7116 -845 2608 124 98 42 chr2 56106399 56106899 -194580955 - MER1A DNA MER1_type 0 529 2 251 178 208 50 chr2 56106942 56107043 -194580811 + L1MC5 LINE L1 7165 7281 -680 1867 97 8 0 chr2 56107193 56107441 -194580413 + AluSx SINE Alu 56 305 -7 1218 129 0 0 chr2 56107441 56107612 -194580242 + AluSg/x SINE Alu 134 304 -8 21 0 0 0 chr2 56108039 56108060 -194579794 + AT_rich Low_complexity Low_complexity 1 21 0 1151 172 21 148 chr2 56108259 56108597 -194579257 + AluYb8 SINE Alu 2 296 -12 2198 114 3 0 chr2 56109342 56109641 -194578213 + AluSx SINE Alu 1 300 -12 2086 126 3 0 chr2 56110050 56110351 -194577503 + AluSx SINE Alu 1 302 -10 1665 151 17 41 chr2 56110612 56110904 -194576950 + AluJb SINE Alu 2 286 -26 4602 42 5 0 chr2 56110922 56111500 -194576354 - LTR10C LTR ERV1 0 591 11 2139 108 3 3 chr2 56111956 56112251 -194575603 + AluSc SINE Alu 1 295 -14 1331 200 3 57 chr2 56112266 56112581 -194575273 + AluJo SINE Alu 9 306 -6 342 209 213 22 chr2 56113027 56113252 -194574602 + L1MC5 LINE L1 7660 7927 -34 559 170 30 0 chr2 56113470 56113570 -194574284 + L1MC1 LINE L1 6231 6333 0 273 29 0 0 chr2 56114312 56114346 -194573508 + (CA)n Simple_repeat Simple_repeat 2 35 0 1650 124 124 4 chr2 56114472 56114739 -194573115 - AluSx SINE Alu -12 300 2 2236 97 0 26 chr2 56114884 56115194 -194572660 - AluSg SINE Alu -8 302 1 1900 144 7 10 chr2 56115233 56115532 -194572322 + AluSx SINE Alu 11 308 -4 1043 134 29 12 chr2 56115602 56115774 -194572080 + AluSx SINE Alu 1 175 -137 2021 101 31 14 chr2 56115911 56116199 -194571655 - AluSg SINE Alu -1 309 17 609 157 30 4 chr2 56116533 56116764 -194571090 + (TA)n Simple_repeat Simple_repeat 1 237 0 802 164 0 8 chr2 56118044 56118172 -194569682 - FLAM_C SINE Alu -16 127 1 30 59 0 0 chr2 56118209 56118260 -194569594 + AT_rich Low_complexity Low_complexity 1 51 0 203 265 44 0 chr2 56118515 56118583 -194569271 + MIR SINE MIR 70 140 -68 767 187 0 8 chr2 56119007 56119141 -194568713 + FLAM_A SINE Alu 1 133 0 246 307 139 0 chr2 56119252 56119353 -194568501 - MIR3 SINE MIR -2 206 92 1645 188 27 10 chr2 56119608 56119900 -194567954 - AluJb SINE Alu -15 297 1 1088 130 6 12 chr2 56121554 56121723 -194566131 + AluSg/x SINE Alu 127 294 -16 26 0 0 0 chr2 56122364 56122390 -194565464 + AT_rich Low_complexity Low_complexity 1 26 0 1478 183 14 21 chr2 56123939 56124218 -194563636 + AluJo SINE Alu 1 277 -35 * 1996 90 8 0 chr2 56124217 56124472 -194563382 - AluSx SINE Alu -12 300 44 23 0 0 0 chr2 56125102 56125125 -194562729 + AT_rich Low_complexity Low_complexity 1 23 0 2112 100 28 0 chr2 56126325 56126615 -194561239 - AluSq SINE Alu -15 298 1 1836 121 14 18 chr2 56127550 56127875 -194559979 - AluSx SINE Alu 0 325 2 2390 86 0 0 chr2 56128017 56128318 -194559536 - AluSx SINE Alu -9 303 3 400 284 200 0 chr2 56128396 56128621 -194559233 - Charlie7 DNA MER1_type -2311 301 32 382 233 49 3 chr2 56128722 56128882 -194558972 + 7SLRNA srpRNA srpRNA 6 214 -106 911 174 0 0 chr2 56129011 56129160 -194558694 + FRAM SINE Alu 6 154 -22 1912 152 3 0 chr2 56129498 56129800 -194558054 + AluJo SINE Alu 7 309 -3 239 261 34 80 chr2 56130034 56130096 -194557758 - MER5A DNA MER1_type -28 161 103 2296 102 3 0 chr2 56130096 56130390 -194557464 + AluSg SINE Alu 1 295 -15 239 261 34 80 chr2 56130390 56130415 -194557439 - MER5A DNA MER1_type -86 103 78 815 120 60 0 chr2 56130672 56130805 -194557049 - FAM SINE Alu -16 169 29 2026 137 3 3 chr2 56131101 56131393 -194556461 + AluSx SINE Alu 1 292 -20 368 314 88 13 chr2 56131459 56131618 -194556236 - MIR SINE MIR -27 235 65 332 293 0 0 chr2 56131624 56131699 -194556155 + MER21B LTR ERV1 21 95 -768 2110 196 140 43 chr2 56131767 56132424 -194555430 + MER21B LTR ERV1 98 818 -45 508 180 90 41 chr2 56132493 56132615 -194555239 + FLAM_A SINE Alu 12 139 -3 182 441 0 0 chr2 56133133 56133244 -194554610 + L2 LINE L2 3158 3268 -4 737 266 118 17 chr2 56134122 56134243 -194553611 + L1ME3 LINE L1 1396 1503 -5552 2267 114 0 0 chr2 56134243 56134551 -194553303 + AluY SINE Alu 1 308 -3 737 266 118 17 chr2 56134551 56134939 -194552915 + L1ME3 LINE L1 1503 2156 -4899 578 217 46 17 chr2 56134929 56135104 -194552750 + L1ME3 LINE L1 5812 5991 -950 * 2255 99 0 10 chr2 56135105 56135408 -194552446 + AluSx SINE Alu 1 300 -12 919 168 0 0 chr2 56135414 56135551 -194552303 + AluSc SINE Alu 120 256 -53 769 172 0 15 chr2 56135552 56135686 -194552168 + FLAM_C SINE Alu 9 140 -3 976 158 0 0 chr2 56135772 56135937 -194551917 + L1MA4A LINE L1 6138 6302 -1 1047 224 47 32 chr2 56135981 56136258 -194551596 + L1ME3 LINE L1 6676 6956 -1 2478 87 3 0 chr2 56136368 56136679 -194551175 + AluSx SINE Alu 1 312 0 23 33 0 0 chr2 56136913 56136943 -194550911 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 56137251 56137281 -194550573 + AT_rich Low_complexity Low_complexity 1 30 0 1155 53 20 0 chr2 56137729 56137880 -194549974 + L1PA2 LINE L1 6001 6154 -1 604 240 192 5 chr2 56138236 56138444 -194549410 - MIR SINE MIR -14 248 2 215 175 32 48 chr2 56139327 56139390 -194548464 + CT-rich Low_complexity Low_complexity 2 63 0 2112 107 13 3 chr2 56139461 56139759 -194548095 + AluSp SINE Alu 5 305 -8 916 234 90 5 chr2 56139886 56140108 -194547746 + MIR SINE MIR 2 242 -20 622 286 123 17 chr2 56140188 56140640 -194547214 + L1MC4a LINE L1 5462 5905 -216 216 0 0 0 chr2 56140887 56140911 -194546943 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 896 135 0 0 chr2 56141354 56141480 -194546374 - FLAM_C SINE Alu -17 126 1 2157 85 28 11 chr2 56141611 56141894 -194545960 - AluSx SINE Alu -24 288 1 952 163 0 19 chr2 56141909 56142069 -194545785 - AluSg/x SINE Alu -24 286 130 935 101 0 0 chr2 56142739 56142858 -194544996 + FLAM_C SINE Alu 1 119 -24 1814 145 35 0 chr2 56143626 56143794 -194544060 - AluSx SINE Alu -13 299 115 261 0 0 0 chr2 56143794 56143823 -194544031 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1814 145 35 0 chr2 56143823 56143943 -194543911 - AluSx SINE Alu -197 115 1 1114 116 0 0 chr2 56144110 56144257 -194543597 + AluSg/x SINE Alu 149 295 -17 251 349 84 16 chr2 56144563 56144812 -194543042 - L2 LINE L2 -573 2741 2476 2881 80 3 0 chr2 56145761 56146147 -194541707 + L1MA2 LINE L1 5395 5781 -523 815 148 8 0 chr2 56146153 56146275 -194541579 + FLAM_C SINE Alu 3 125 -18 3158 78 57 77 chr2 56146283 56146346 -194541508 + L1MA2 LINE L1 5768 5831 -473 2121 87 6 84 chr2 56146346 56146678 -194541176 + AluSx SINE Alu 1 306 -6 3158 78 57 77 chr2 56146678 56147092 -194540762 + L1MA2 LINE L1 5831 6235 -69 1677 162 0 70 chr2 56147092 56147419 -194540435 + AluSx SINE Alu 1 304 -8 3158 78 57 77 chr2 56147419 56147488 -194540366 + L1MA2 LINE L1 6235 6304 0 1944 147 3 6 chr2 56147508 56147820 -194540034 - AluSx SINE Alu -1 311 1 1154 160 116 56 chr2 56147913 56148181 -194539673 - AluJo SINE Alu -16 286 3 920 169 0 0 chr2 56148769 56148911 -194538943 + AluSg/x SINE Alu 137 278 -34 362 296 138 25 chr2 56151170 56151278 -194536576 + MIR SINE MIR 32 126 -136 607 231 151 35 chr2 56151278 56151590 -194536264 + MER7A DNA MER2_type 1 346 0 362 296 138 25 chr2 56151590 56151677 -194536177 + MIR SINE MIR 126 249 -13 295 345 67 8 chr2 56152091 56152210 -194535644 - L2 LINE L2 0 3272 3147 21 0 0 0 chr2 56152884 56152905 -194534949 + AT_rich Low_complexity Low_complexity 1 21 0 1731 166 7 20 chr2 56153099 56153395 -194534459 + AluJb SINE Alu 1 292 -20 2218 79 10 0 chr2 56153456 56153748 -194534106 - AluY SINE Alu -16 295 1 2216 121 0 9 chr2 56154468 56154783 -194533071 + AluSx SINE Alu 1 312 0 1637 195 40 7 chr2 56154914 56155216 -194532638 + AluJb SINE Alu 1 312 0 1540 130 3 62 chr2 56155259 56155551 -194532303 + L1PA15 LINE L1 5888 6162 -3 185 307 136 11 chr2 56156363 56156451 -194531403 - MIR3 SINE MIR -107 101 3 2393 100 0 0 chr2 56156708 56157017 -194530837 + AluSc SINE Alu 1 309 0 1703 167 42 30 chr2 56157476 56157811 -194530043 - L1PA16 LINE L1 -20 6146 5808 652 159 0 0 chr2 56157949 56158056 -194529798 + FLAM_A SINE Alu 35 141 -1 792 195 137 16 chr2 56158111 56158301 -194529553 - MER58A DNA MER1_type -11 213 1 1625 154 46 0 chr2 56158640 56158925 -194528929 - AluJb SINE Alu -14 298 1 518 268 131 20 chr2 56159065 56159263 -194528591 - MIR SINE MIR -40 222 3 441 141 304 0 chr2 56159351 56159443 -194528411 + FLAM_A SINE Alu 13 132 -10 2015 77 0 21 chr2 56159443 56159729 -194528125 + AluY SINE Alu 1 280 -31 189 0 0 0 chr2 56159729 56159750 -194528104 + (T)n Simple_repeat Simple_repeat 1 21 0 620 186 31 16 chr2 56160884 56161013 -194526841 + FLAM_C SINE Alu 1 131 -12 2036 109 3 14 chr2 56161259 56161542 -194526312 + AluSx SINE Alu 1 280 -32 3138 51 34 0 chr2 56161688 56162278 -194525576 - L1P2 LINE L1 -614 5540 4939 5869 148 20 13 chr2 56162278 56163293 -194524561 + Tigger2 DNA MER2_type 1697 2718 0 261 0 0 0 chr2 56166477 56166506 -194521348 + (A)n Simple_repeat Simple_repeat 1 29 0 329 310 41 48 chr2 56166626 56166771 -194521083 + MIR3 SINE MIR 32 175 -33 834 300 153 8 chr2 56167415 56167768 -194520086 + L2 LINE L2 2376 2779 -535 261 323 153 0 chr2 56167838 56167962 -194519892 + L2 LINE L2 2918 3060 -253 224 247 14 41 chr2 56168055 56168128 -194519726 + L2 LINE L2 3243 3313 0 302 227 0 67 chr2 56168507 56168582 -194519272 + MER94 DNA DNA 17 86 -48 1230 299 14 14 chr2 56168984 56169339 -194518515 - LTR16A LTR ERVL 0 450 96 195 326 22 33 chr2 56169547 56169639 -194518215 + L2 LINE L2 3204 3294 -19 23 0 0 0 chr2 56170283 56170306 -194517548 + AT_rich Low_complexity Low_complexity 1 23 0 1079 122 15 26 chr2 56170364 56170946 -194516908 - L1PB2 LINE L1 0 6151 5460 411 284 229 5 chr2 56171242 56171427 -194516427 + MIR SINE MIR 37 262 0 1410 178 11 47 chr2 56171570 56171846 -194516008 + Tigger7 DNA MER2_type 1 266 -284 474 204 11 21 chr2 56171858 56171951 -194515903 + Tigger7 DNA MER2_type 2396 2487 0 2280 117 0 0 chr2 56172400 56172709 -194515145 - AluSx SINE Alu -3 309 1 1050 260 42 39 chr2 56175627 56176011 -194511843 + L2 LINE L2 2886 3270 -43 553 141 0 12 chr2 56176250 56176335 -194511519 + MLT1A1 LTR MaLR 1 84 -281 * 837 145 14 0 chr2 56176331 56176469 -194511385 + MLT1A1 LTR MaLR 226 365 0 689 139 170 19 chr2 56176470 56176709 -194511145 - Charlie5 DNA MER1_type 0 2624 33 836 190 7 7 chr2 56176711 56176853 -194511001 + AluJb SINE Alu 137 278 -34 261 0 0 0 chr2 56176853 56176882 -194510972 + (TC)n Simple_repeat Simple_repeat 2 30 0 307 219 0 0 chr2 56176882 56176946 -194510908 + L1MC4 LINE L1 6640 6703 -1339 182 319 0 43 chr2 56177603 56177672 -194510182 + L2 LINE L2 2982 3047 -225 583 216 105 0 chr2 56177688 56177859 -194509995 - MER53 DNA DNA 0 189 1 417 39 0 0 chr2 56178343 56178394 -194509460 + (CA)n Simple_repeat Simple_repeat 1 51 0 806 114 136 0 chr2 56178423 56178555 -194509299 - MLT1B LTR MaLR -50 340 191 1276 244 38 12 chr2 56178678 56179018 -194508836 + L1ME3A LINE L1 1207 1555 -5304 203 86 0 29 chr2 56179176 56179211 -194508643 + (CTTTG)n Simple_repeat Simple_repeat 2 35 0 365 288 64 16 chr2 56179404 56179529 -194508325 + MIR SINE MIR 49 179 -83 354 259 39 112 chr2 56179531 56179736 -194508118 - L2 LINE L2 -5 3308 3119 1860 270 95 22 chr2 56179773 56180713 -194507141 + L1ME3A LINE L1 1576 2727 -4411 1780 193 3 0 chr2 56180714 56181019 -194506835 - AluJo SINE Alu -1 311 6 4438 164 8 1 chr2 56181044 56181780 -194506074 + MER109 Unknown Unknown 275 1015 -1417 7002 173 134 48 chr2 56182067 56183665 -194504189 + MER52A LTR ERV1 21 1755 0 2526 201 52 12 chr2 56183667 56184164 -194503690 + MER109 Unknown Unknown 1911 2427 -5 3975 241 76 96 chr2 56184173 56184538 -194503316 + L1ME3A LINE L1 2720 3091 -3866 1439 156 17 0 chr2 56184538 56184769 -194503085 - MER46A DNA MER2_type -1 235 1 3975 241 76 96 chr2 56184769 56185698 -194502156 + L1ME3A LINE L1 3091 4037 -2920 1529 225 109 68 chr2 56185698 56186183 -194501671 + MLT1D LTR MaLR 1 505 0 3975 241 76 96 chr2 56186183 56186584 -194501270 + L1ME3A LINE L1 4037 4444 -2513 2333 171 54 10 chr2 56186584 56186994 -194500860 - MSTA LTR MaLR 0 428 1 3975 241 76 96 chr2 56186994 56187819 -194500035 + L1ME3A LINE L1 4444 5150 -1807 2275 218 74 21 chr2 56187835 56188350 -194499504 - MER44D DNA MER2_type -8 597 1 583 263 48 59 chr2 56188354 56188726 -194499128 + L1ME3A LINE L1 5149 5516 -1441 2019 262 102 40 chr2 56188738 56188787 -194499067 + L1ME3A LINE L1 5696 5741 -1240 2107 140 0 0 chr2 56188787 56189087 -194498767 - AluJb SINE Alu -12 300 1 2019 262 102 40 chr2 56189087 56190192 -194497662 + L1ME3A LINE L1 5741 6913 -68 384 123 0 35 chr2 56190218 56190275 -194497579 - MER2 DNA MER2_type 0 345 291 234 373 25 25 chr2 56190493 56190654 -194497200 - L2 LINE L2 -1044 2270 2110 2407 49 0 3 chr2 56191319 56191637 -194496217 - AluY SINE Alu 0 317 1 830 223 52 82 chr2 56192547 56192816 -194495038 + MIR SINE MIR 2 262 0 659 311 24 5 chr2 56192980 56193186 -194494668 + MIR SINE MIR 53 262 0 183 297 110 0 chr2 56193595 56193686 -194494168 + MIR SINE MIR 119 219 -43 1674 141 41 7 chr2 56194817 56195086 -194492768 + AluSx SINE Alu 2 279 -33 1141 260 143 14 chr2 56196000 56196435 -194491419 + L1ME3 LINE L1 5656 6146 -16 2052 201 81 34 chr2 56198401 56198779 -194489075 - L1ME2 LINE L1 0 6164 5750 670 156 0 18 chr2 56198779 56198888 -194488966 - U6 snRNA snRNA 0 107 1 2052 201 81 34 chr2 56198888 56199066 -194488788 - L1ME2 LINE L1 -414 5750 5582 1836 169 0 7 chr2 56199067 56199363 -194488491 + AluJb SINE Alu 1 294 -18 2314 82 20 0 chr2 56199442 56199735 -194488119 - AluSg SINE Alu -11 299 1 2285 108 0 13 chr2 56199903 56200218 -194487636 + AluSq SINE Alu 1 311 -2 1350 204 73 36 chr2 56202286 56202643 -194485211 - MLT1C LTR MaLR 0 467 98 1598 185 67 15 chr2 56202673 56203003 -194484851 + MLT1A1 LTR MaLR 19 365 0 298 193 53 0 chr2 56203006 56203063 -194484791 - MLT1C LTR MaLR -405 62 3 443 278 0 88 chr2 56203091 56203205 -194484649 + MER5B DNA MER1_type 1 93 -85 1431 117 84 9 chr2 56203205 56203419 -194484435 + MER30 DNA MER1_type 1 230 0 443 278 0 88 chr2 56203419 56203498 -194484356 + MER5B DNA MER1_type 93 177 -1 24 0 0 0 chr2 56204092 56204116 -194483738 + AT_rich Low_complexity Low_complexity 1 24 0 216 347 0 0 chr2 56205215 56205287 -194482567 - L2 LINE L2 0 3272 3201 644 227 112 84 chr2 56205790 56205911 -194481943 + Charlie8 DNA MER1_type 70 186 -2231 1630 76 0 14 chr2 56205911 56206167 -194481687 - AluY SINE Alu 0 311 89 644 227 112 84 chr2 56206167 56206367 -194481487 + Charlie8 DNA MER1_type 186 400 -2017 270 209 114 114 chr2 56207724 56207935 -194479919 - MLT1J LTR MaLR -53 458 248 647 226 19 31 chr2 56208166 56208325 -194479529 - L2 LINE L2 -5 3267 3111 1404 229 95 25 chr2 56208425 56208909 -194478945 + L1MD3 LINE L1 7478 7995 0 201 333 0 0 chr2 56208957 56209008 -194478846 - L2 LINE L2 -31 3282 3232 29 28 0 0 chr2 56209813 56209849 -194478005 + AT_rich Low_complexity Low_complexity 1 36 0 423 0 0 0 chr2 56210625 56210672 -194477182 + (TG)n Simple_repeat Simple_repeat 2 48 0 467 264 165 78 chr2 56210980 56211314 -194476540 + MLT1L LTR MaLR 4 366 -249 296 227 67 0 chr2 56212181 56212256 -194475598 + L2 LINE L2 3233 3312 -1 485 284 86 56 chr2 56212482 56212714 -194475140 + MIR SINE MIR 24 262 0 2176 118 7 0 chr2 56212829 56213125 -194474729 - AluY SINE Alu -13 298 1 2137 112 0 16 chr2 56213135 56213447 -194474407 - AluSx SINE Alu -5 307 1 24 0 0 0 chr2 56213795 56213819 -194474035 + AT_rich Low_complexity Low_complexity 1 24 0 1368 146 0 23 chr2 56213821 56214040 -194473814 - L1PA16 LINE L1 -2 6164 5951 353 206 74 103 chr2 56214120 56214295 -194473559 + L2 LINE L2 3128 3297 -16 385 257 150 7 chr2 56214537 56214677 -194473177 - MIR SINE MIR -15 247 88 1275 155 22 17 chr2 56214731 56214963 -194472891 - L1MA8 LINE L1 -2 6289 6057 453 307 46 58 chr2 56215050 56215395 -194472459 - MLT1J LTR MaLR -52 459 119 43424 33 24 2 chr2 56215441 56221452 -194466402 + L1PA3 LINE L1 7 6147 -8 291 281 153 92 chr2 56221557 56221852 -194466002 + L2 LINE L2 2959 3271 -1 1991 201 127 71 chr2 56222765 56222953 -194464901 + MLT1F1 LTR MaLR 1 177 -390 455 0 18 0 chr2 56222953 56223008 -194464846 + (TC)n Simple_repeat Simple_repeat 1 56 0 1991 201 127 71 chr2 56223008 56223356 -194464498 + MLT1F1 LTR MaLR 177 567 0 754 297 82 25 chr2 56223543 56224078 -194463776 - L1ME LINE L1 -301 5820 5255 909 299 116 21 chr2 56224578 56225053 -194462801 + MLT1L LTR MaLR 88 607 -8 1705 148 4 4 chr2 56226681 56226931 -194460923 + AluJo SINE Alu 1 250 -62 867 216 3 6 chr2 56226944 56227240 -194460614 + GA-rich Low_complexity Low_complexity 1 295 0 312 27 0 0 chr2 56227247 56227284 -194460570 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 965 177 28 0 chr2 56227482 56227663 -194460191 - MER53 DNA DNA 0 189 4 473 188 201 34 chr2 56227726 56227875 -194459979 + MER5B DNA MER1_type 2 175 -3 27 29 0 0 chr2 56227975 56228009 -194459845 + AT_rich Low_complexity Low_complexity 1 34 0 1677 163 17 27 chr2 56228536 56228837 -194459017 - AluJb SINE Alu -14 298 1 2543 191 26 28 chr2 56230012 56230556 -194457298 + MER90 LTR ERV1 70 612 -2 2473 64 0 22 chr2 56230928 56231241 -194456613 - AluY SINE Alu -5 306 1 521 217 14 161 chr2 56231657 56231811 -194456043 + MER112 DNA MER1_type 2 177 -83 1731 180 34 10 chr2 56231811 56231932 -194455922 + AluJo SINE Alu 1 118 -194 207 0 0 0 chr2 56231932 56231955 -194455899 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1718 183 3 35 chr2 56231958 56232275 -194455579 + AluJb SINE Alu 1 307 -5 1731 180 34 10 chr2 56232275 56232444 -194455410 + AluJo SINE Alu 119 302 -10 521 217 14 161 chr2 56232444 56232575 -194455279 + MER112 DNA MER1_type 177 245 -15 21 0 0 0 chr2 56233691 56233712 -194454142 + AT_rich Low_complexity Low_complexity 1 21 0 885 285 26 13 chr2 56233905 56234164 -194453690 - MIR SINE MIR 0 262 3 2356 41 3 24 chr2 56234667 56234991 -194452863 + AluY SINE Alu 1 318 0 203 267 27 13 chr2 56236785 56236860 -194450994 - MIR SINE MIR -16 246 171 2109 123 0 19 chr2 56236962 56237279 -194450575 + AluSx SINE Alu 1 311 -1 198 207 35 0 chr2 56237279 56237337 -194450517 - MIR SINE MIR -129 133 74 234 313 87 26 chr2 56238923 56239038 -194448816 - MIR3 SINE MIR -24 184 63 6382 140 12 12 chr2 56241022 56241320 -194446534 - L1MA4A LINE L1 0 6303 6006 294 50 0 0 chr2 56241320 56241360 -194446494 + (CA)n Simple_repeat Simple_repeat 1 40 0 6382 140 12 12 chr2 56241360 56242198 -194445656 - L1MA4A LINE L1 -297 6006 5167 2239 103 0 0 chr2 56242198 56242488 -194445366 - AluSc SINE Alu -19 290 1 6382 140 12 12 chr2 56242488 56242784 -194445070 - L1MA4A LINE L1 -1136 5167 4872 266 238 48 0 chr2 56242910 56242973 -194444881 - MER57-int LTR ERV1 -7238 299 234 831 228 16 5 chr2 56243189 56243373 -194444481 - MER5A DNA MER1_type -3 186 1 2181 110 0 0 chr2 56244574 56244864 -194442990 + AluSg SINE Alu 1 290 -20 303 277 154 64 chr2 56244866 56244990 -194442864 + MIR SINE MIR 26 174 -88 953 171 80 6 chr2 56244990 56245166 -194442688 + MER5A DNA MER1_type 1 189 0 303 277 154 64 chr2 56245166 56245229 -194442625 + MIR SINE MIR 174 230 -32 189 0 0 0 chr2 56245362 56245383 -194442471 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2253 73 0 14 chr2 56245385 56245673 -194442181 - AluY SINE Alu -25 286 3 676 177 0 24 chr2 56245737 56245861 -194441993 - AluJb SINE Alu 0 312 192 * 736 207 0 8 chr2 56245859 56245980 -194441874 - AluJb SINE Alu -58 254 135 332 307 102 18 chr2 56245980 56246146 -194441708 - L1ME4a LINE L1 -217 5904 5725 22 35 0 0 chr2 56246640 56246669 -194441185 + AT_rich Low_complexity Low_complexity 1 29 0 334 290 156 35 chr2 56247141 56247686 -194440168 + L1M4 LINE L1 4233 4843 -1303 531 241 117 6 chr2 56247825 56247987 -194439867 + L2 LINE L2 2552 2731 -583 571 221 113 63 chr2 56248051 56248273 -194439581 - MIR SINE MIR 0 262 30 417 39 0 0 chr2 56248827 56248878 -194438976 + (TG)n Simple_repeat Simple_repeat 1 51 0 434 332 92 9 chr2 56249230 56249447 -194438407 - MIR SINE MIR -8 254 20 1240 293 50 25 chr2 56249708 56250306 -194437548 - L1ME3A LINE L1 -222 5948 5336 407 374 77 16 chr2 56250389 56250807 -194437047 - L2 LINE L2 -110 3162 2713 710 288 80 0 chr2 56251642 56251868 -194435986 - MIR SINE MIR -4 258 15 2007 211 8 6 chr2 56252383 56252747 -194435107 + MLT1A1 LTR MaLR 1 365 0 764 153 11 9 chr2 56254301 56254505 -194433349 - AluJb SINE Alu -9 303 30 207 0 0 0 chr2 56254771 56254794 -194433060 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1824 172 7 0 chr2 56254795 56255086 -194432768 + AluJo SINE Alu 4 296 -16 365 255 49 10 chr2 56255229 56255331 -194432523 + MER96B DNA MER1_type? 1 106 -311 198 71 0 0 chr2 56255334 56255362 -194432492 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1140 182 0 29 chr2 56255380 56255589 -194432265 - AluJ SINE Alu -109 203 1 276 68 27 122 chr2 56255593 56255667 -194432187 - MER96B DNA MER1_type? -101 316 250 1980 88 109 4 chr2 56255845 56256119 -194431735 + AluSq SINE Alu 1 303 -10 288 348 116 13 chr2 56256359 56256592 -194431262 + MIR SINE MIR 2 258 -4 210 304 232 6 chr2 56256901 56257069 -194430785 - MIR SINE MIR 0 262 57 2379 112 0 0 chr2 56259096 56259408 -194428446 - AluSx SINE Alu 0 312 1 1283 171 9 5 chr2 56259947 56260164 -194427690 + MER58A DNA MER1_type 7 224 0 337 319 38 25 chr2 56261070 56261227 -194426627 + L2 LINE L2 2602 2760 -554 255 103 0 0 chr2 56261709 56261748 -194426106 + (TC)n Simple_repeat Simple_repeat 2 40 0 219 304 18 0 chr2 56261825 56261881 -194425973 - L2 LINE L2 0 3272 3216 435 84 39 77 chr2 56262525 56262680 -194425174 + (TA)n Simple_repeat Simple_repeat 1 149 0 187 336 177 9 chr2 56263119 56263345 -194424509 + L2 LINE L2 2710 2973 -341 2511 167 94 2 chr2 56263800 56264255 -194423599 + LOR1a LTR ERV1 1 497 0 434 309 113 5 chr2 56265381 56265575 -194422279 + L2 LINE L2 2440 2654 -660 1292 198 26 38 chr2 56265577 56265890 -194421964 - L1MA4 LINE L1 -2 6298 5990 638 317 56 22 chr2 56265890 56266212 -194421642 + L2 LINE L2 2645 2977 -337 2171 121 0 0 chr2 56266657 56266955 -194420899 + AluSx SINE Alu 3 300 -12 21 57 0 0 chr2 56267004 56267039 -194420815 + AT_rich Low_complexity Low_complexity 1 35 0 2120 117 0 0 chr2 56267439 56267753 -194420101 + AluSx SINE Alu 1 314 0 2160 176 3 3 chr2 56268092 56268445 -194419409 + MLT1A1 LTR MaLR 13 365 0 272 210 235 50 chr2 56270090 56270209 -194417645 - MIR SINE MIR -99 163 23 27 49 0 0 chr2 56271095 56271136 -194416718 + AT_rich Low_complexity Low_complexity 1 41 0 2898 10 0 0 chr2 56272920 56273231 -194414623 - AluY SINE Alu 0 311 1 274 295 22 17 chr2 56273400 56273548 -194414306 + MIR SINE MIR 76 262 0 185 379 36 7 chr2 56273570 56273710 -194414144 - L2 LINE L2 -456 2858 2715 4108 80 11 2 chr2 56274273 56274845 -194413009 + LTR8 LTR ERV1 1 577 -114 448 288 23 6 chr2 56274847 56275024 -194412830 + L1ME4a LINE L1 5556 5735 -386 3117 182 41 5 chr2 56275052 56275668 -194412186 - LTR9B LTR ERV1 0 644 7 1385 207 28 6 chr2 56275686 56276009 -194411845 + MER58B DNA MER1_type 12 341 0 256 266 148 16 chr2 56276009 56276253 -194411601 + L1ME4a LINE L1 5765 6040 -81 2159 258 25 32 chr2 56276320 56276917 -194410937 + MLT1E LTR MaLR 1 593 0 2119 116 0 3 chr2 56276931 56277223 -194410631 + AluSq SINE Alu 1 291 -22 423 98 0 0 chr2 56277224 56277285 -194410569 + (CA)n Simple_repeat Simple_repeat 2 62 0 28 29 0 0 chr2 56277285 56277320 -194410534 + AT_rich Low_complexity Low_complexity 1 35 0 3634 141 69 41 chr2 56277540 56278247 -194409607 + LTR8A LTR ERV1 1 727 0 225 0 0 0 chr2 56278729 56278754 -194409100 + (A)n Simple_repeat Simple_repeat 1 25 0 700 193 7 20 chr2 56279412 56279562 -194408292 + MLT1A1 LTR MaLR 3 150 -215 3106 142 7 61 chr2 56279580 56280191 -194407663 + LTR9 LTR ERV1 2 579 -33 186 103 0 0 chr2 56280196 56280225 -194407629 + (TC)n Simple_repeat Simple_repeat 2 30 0 768 171 0 14 chr2 56280238 56280378 -194407476 + MLT1A1 LTR MaLR 170 307 -58 2092 185 128 67 chr2 56280380 56281018 -194406836 - LTR48 LTR ERV1 0 787 189 2196 141 0 0 chr2 56281018 56281330 -194406524 - AluSx SINE Alu 0 312 1 2092 185 128 67 chr2 56281330 56281395 -194406459 - LTR48 LTR ERV1 -598 189 129 2999 160 20 60 chr2 56281395 56282032 -194405822 - LTR9 LTR ERV1 0 612 1 2092 185 128 67 chr2 56282032 56282069 -194405785 - LTR48 LTR ERV1 -658 129 1 396 119 0 0 chr2 56282069 56282128 -194405726 + MLT1A1 LTR MaLR 316 374 0 661 220 191 25 chr2 56282369 56282571 -194405283 + L1MC5 LINE L1 7501 7668 -293 225 0 0 0 chr2 56282571 56282596 -194405258 + (TATG)n Simple_repeat Simple_repeat 2 26 0 661 220 191 25 chr2 56282596 56282707 -194405147 + L1MC5 LINE L1 7668 7866 -95 950 269 194 6 chr2 56282707 56283072 -194404782 - MLT1G1 LTR MaLR -13 582 149 257 311 119 25 chr2 56283076 56283548 -194404306 + L1MC4a LINE L1 4475 4984 -1162 * 1586 231 165 12 chr2 56283539 56284231 -194403623 + L1MC4a LINE L1 5378 6175 -1633 2225 93 35 0 chr2 56284555 56284845 -194403009 + AluSq SINE Alu 1 300 -13 757 227 96 60 chr2 56284855 56284905 -194402949 + L1MC5 LINE L1 6562 6609 -1352 1839 152 54 15 chr2 56284905 56285240 -194402614 - MER7A DNA MER2_type 0 346 1 757 227 96 60 chr2 56285240 56285556 -194402298 + L1MC5 LINE L1 6609 6991 -970 4819 73 14 1 chr2 56285556 56286203 -194401651 + L1PA13 LINE L1 5506 6160 -3 757 227 96 60 chr2 56286203 56286369 -194401485 + L1MC5 LINE L1 6991 7150 -811 285 231 133 49 chr2 56286372 56286515 -194401339 + L1MC5 LINE L1 7185 7339 -622 324 238 113 0 chr2 56286515 56286595 -194401259 + MER45 DNA AcHobo 2 90 -950 1967 157 0 0 chr2 56286602 56286896 -194400958 + AluJo SINE Alu 1 294 -18 1680 146 83 37 chr2 56286896 56287246 -194400608 - THE1C LTR MaLR -4 371 6 490 215 0 19 chr2 56287248 56287438 -194400416 + GA-rich Low_complexity Low_complexity 1 186 0 306 113 57 0 chr2 56287438 56287491 -194400363 + MER45 DNA AcHobo 1518 1573 -8 2155 207 98 4 chr2 56287531 56288042 -194399812 + MLT1F1 LTR MaLR 1 559 -8 2461 81 0 0 chr2 56288102 56288411 -194399443 + AluY SINE Alu 1 309 -2 879 214 60 54 chr2 56288482 56288818 -194399036 + L1MC5 LINE L1 7549 7886 -75 272 189 161 84 chr2 56288848 56288991 -194398863 + L1MC5 LINE L1 7185 7338 -623 21 71 0 0 chr2 56289096 56289138 -194398716 + AT_rich Low_complexity Low_complexity 1 42 0 1446 133 17 37 chr2 56290123 56290249 -194397605 - AluJo SINE Alu -76 236 116 2405 168 24 0 chr2 56290249 56290665 -194397189 - MSTB LTR MaLR 0 426 1 1446 133 17 37 chr2 56290665 56290779 -194397075 - AluJo SINE Alu -196 116 1 26516 82 6 2 chr2 56291440 56296087 -194391767 + L1PA7 LINE L1 1495 6153 -1 21 0 0 0 chr2 56296101 56296122 -194391732 + AT_rich Low_complexity Low_complexity 1 21 0 1352 101 5 18 chr2 56296122 56296133 -194391721 + L1PB1 LINE L1 5814 5824 -327 2079 86 55 7 chr2 56296133 56296424 -194391430 + AluSp SINE Alu 1 305 -8 1352 101 5 18 chr2 56296424 56296630 -194391224 + L1PB1 LINE L1 5824 6028 -123 592 176 0 0 chr2 56296630 56296732 -194391122 + LTR23 LTR ERV1 299 400 -37 23 0 0 29 chr2 56296732 56296745 -194391109 + AT_rich Low_complexity Low_complexity 1 13 -20 947 97 0 0 chr2 56296745 56296879 -194390975 + L1PB1 LINE L1 6018 6151 0 23 0 0 29 chr2 56296879 56296899 -194390955 + AT_rich Low_complexity Low_complexity 13 33 0 2214 99 0 3 chr2 56297648 56297942 -194389912 - AluY SINE Alu -18 293 1 659 120 10 0 chr2 56298278 56298378 -194389476 + AluSg/x SINE Alu 201 301 -8 234 0 0 0 chr2 56298700 56298726 -194389128 + (T)n Simple_repeat Simple_repeat 1 26 0 398 296 183 5 chr2 56299574 56299760 -194388094 - MIR SINE MIR -13 249 31 396 0 0 0 chr2 56299761 56299805 -194388049 + (TG)n Simple_repeat Simple_repeat 2 45 0 2288 100 3 0 chr2 56299885 56300186 -194387668 + AluSq SINE Alu 1 302 -11 193 313 10 61 chr2 56301994 56302093 -194385761 - MIR SINE MIR -94 114 21 374 280 39 42 chr2 56303348 56303594 -194384260 + MIR3 SINE MIR 3 221 -41 1974 225 193 49 chr2 56303628 56304849 -194383005 - Charlie7 DNA MER1_type -1 2611 1215 3245 138 44 18 chr2 56304849 56305169 -194382685 + MER7C DNA MER2_type 1 344 -2684 2333 91 7 0 chr2 56305169 56305476 -194382378 - AluSx SINE Alu -3 309 1 3245 138 44 18 chr2 56305476 56305728 -194382126 + MER7C DNA MER2_type 344 588 -14 1767 231 73 21 chr2 56305740 56306345 -194381509 - Charlie7 DNA MER1_type -1396 1216 581 22 0 0 0 chr2 56306398 56306420 -194381434 + AT_rich Low_complexity Low_complexity 1 22 0 920 167 99 75 chr2 56306420 56306548 -194381306 - L1MA9 LINE L1 -38 6274 6151 219 69 0 0 chr2 56306548 56306577 -194381277 + (TG)n Simple_repeat Simple_repeat 1 29 0 920 167 99 75 chr2 56306577 56306742 -194381112 - L1MA9 LINE L1 -161 6151 5974 563 263 62 13 chr2 56306743 56306967 -194380887 - Charlie7 DNA MER1_type -2065 547 313 5080 114 10 4 chr2 56308150 56308958 -194378896 - L1PA13 LINE L1 -4 6159 5347 22 35 0 0 chr2 56308961 56308990 -194378864 + AT_rich Low_complexity Low_complexity 1 29 0 4259 107 40 22 chr2 56308990 56309713 -194378141 - L1MA3 LINE L1 0 6305 5570 10260 162 37 13 chr2 56309715 56310285 -194377569 - L1MA3 LINE L1 -932 5214 4659 2408 90 0 7 chr2 56310285 56310586 -194377268 + AluSg SINE Alu 1 299 -11 10260 162 37 13 chr2 56310586 56310886 -194376968 - L1MA3 LINE L1 -1487 4659 4368 2454 81 0 0 chr2 56310886 56311184 -194376670 - AluSx SINE Alu -14 298 1 10260 162 37 13 chr2 56311184 56311825 -194376029 - L1MA3 LINE L1 -1778 4368 3744 195 69 0 0 chr2 56311825 56311854 -194376000 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 10260 162 37 13 chr2 56311854 56312498 -194375356 - L1MA3 LINE L1 -2402 3744 3006 198 0 0 0 chr2 56315112 56315134 -194372720 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2133 87 7 18 chr2 56315141 56315427 -194372427 - AluSp SINE Alu -30 283 1 219 36 0 0 chr2 56315661 56315689 -194372165 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 1803 141 13 23 chr2 56316225 56316524 -194371330 - AluJo SINE Alu -16 296 1 442 208 20 0 chr2 56316597 56316698 -194371156 - MLT1I LTR MaLR -13 396 294 372 234 93 28 chr2 56316974 56317070 -194370784 - MIR SINE MIR -94 168 63 2186 67 0 0 chr2 56317070 56317354 -194370500 + L1PA7 LINE L1 5871 6154 0 22 56 0 0 chr2 56317413 56317449 -194370405 + AT_rich Low_complexity Low_complexity 1 36 0 1909 147 0 11 chr2 56318358 56318643 -194369211 + AluJb SINE Alu 1 282 -30 207 88 0 0 chr2 56318647 56318681 -194369173 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 23 0 0 0 chr2 56319850 56319873 -194367981 + AT_rich Low_complexity Low_complexity 1 23 0 1125 135 20 20 chr2 56320383 56320583 -194367271 - MER20 DNA MER1_type -3 216 17 367 281 86 14 chr2 56320702 56320841 -194367013 - L2 LINE L2 -943 2371 2223 277 297 118 41 chr2 56323082 56323277 -194364577 + MIR SINE MIR 8 217 -45 980 123 12 29 chr2 56325158 56325302 -194362552 - MER2 DNA MER2_type -139 206 64 4186 108 9 11 chr2 56325302 56325938 -194361916 + MER41B LTR ERV1 1 635 0 980 123 12 29 chr2 56325938 56325964 -194361890 - MER2 DNA MER2_type -281 64 39 2356 240 38 28 chr2 56325964 56326601 -194361253 - MLT-int LTR MaLR -155 1580 938 3016 229 36 10 chr2 56326613 56327386 -194360468 - MSTC-int LTR MaLR -942 793 1 1148 168 114 28 chr2 56327386 56327751 -194360103 - MSTC LTR MaLR 0 428 1 1542 173 61 4 chr2 56329389 56329667 -194358187 - AluJo SINE Alu -18 294 1 21 36 0 0 chr2 56329682 56329710 -194358144 + AT_rich Low_complexity Low_complexity 1 28 0 273 182 231 74 chr2 56329710 56329831 -194358023 - MIR SINE MIR -65 197 58 346 287 0 0 chr2 56330328 56330450 -194357404 - MER103 DNA DNA -43 123 2 762 197 0 0 chr2 56331896 56332028 -194355826 + FRAM SINE Alu 37 168 -8 21 0 0 0 chr2 56332285 56332306 -194355548 + AT_rich Low_complexity Low_complexity 1 21 0 1985 138 13 0 chr2 56332489 56332793 -194355061 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr2 56332860 56332881 -194354973 + AT_rich Low_complexity Low_complexity 1 21 0 842 213 87 27 chr2 56333153 56333486 -194354368 + MER31-int LTR ERV1 2455 2807 -2129 336 60 0 0 chr2 56333500 56333550 -194354304 + LTR54 LTR ERV1 412 461 -49 532 251 37 33 chr2 56333961 56334239 -194353615 - L1MDa LINE L1 -4869 1513 1134 465 284 38 60 chr2 56334451 56334634 -194353220 - MIR SINE MIR -50 212 34 295 229 114 0 chr2 56334758 56334828 -194353026 - L2 LINE L2 -91 3222 3145 2010 117 23 17 chr2 56334852 56335152 -194352702 - AluY SINE Alu -9 302 1 636 205 66 0 chr2 56335533 56335684 -194352170 + MER3 DNA MER1_type 49 209 0 278 160 0 0 chr2 56335641 56335691 -194352163 - MER3 DNA MER1_type -119 90 41 * 317 186 0 17 chr2 56335703 56335762 -194352092 + MER5A DNA MER1_type 14 71 -118 2269 81 3 23 chr2 56335767 56336077 -194351777 + AluY SINE Alu 1 304 -7 2089 145 0 3 chr2 56336087 56336397 -194351457 + AluSx SINE Alu 2 310 -2 209 167 0 0 chr2 56336416 56336452 -194351402 + MER5A DNA MER1_type 61 96 -93 2810 106 21 12 chr2 56336452 56336876 -194350978 + MSTA LTR MaLR 1 428 0 4791 163 50 15 chr2 56336876 56337822 -194350032 + MSTA-int LTR MaLR 1 979 -672 271 245 21 21 chr2 56338012 56338106 -194349748 + L1MC5 LINE L1 7832 7925 -36 1300 267 69 16 chr2 56338135 56338570 -194349284 + MLT1F LTR MaLR 7 464 -78 858 278 72 56 chr2 56338643 56339211 -194348643 - L1ME LINE L1 -5094 976 400 1847 143 16 26 chr2 56339252 56339559 -194348295 + AluJb SINE Alu 1 304 -8 370 280 24 72 chr2 56339872 56339909 -194347945 - L1ME LINE L1 -5851 219 182 1921 140 41 0 chr2 56339909 56340201 -194347653 + AluSx SINE Alu 1 304 -8 370 280 24 72 chr2 56340201 56340370 -194347484 - L1ME LINE L1 -5888 182 23 23 54 0 0 chr2 56340611 56340648 -194347206 + AT_rich Low_complexity Low_complexity 1 37 0 207 0 0 0 chr2 56341153 56341176 -194346678 + (CA)n Simple_repeat Simple_repeat 2 24 0 695 129 78 9 chr2 56341464 56341580 -194346274 + AluSq/x SINE Alu 1 124 -189 1859 163 0 0 chr2 56342038 56342332 -194345522 + AluJb SINE Alu 1 294 -18 749 165 0 0 chr2 56345352 56345473 -194342381 + FLAM_C SINE Alu 11 131 -12 7144 124 33 51 chr2 56345899 56347096 -194340758 + L1PA16 LINE L1 1640 2857 -3992 244 122 0 0 chr2 56347096 56347137 -194340717 + U5 snRNA snRNA 12 52 -64 7144 124 33 51 chr2 56347137 56347322 -194340532 + L1PA16 LINE L1 2857 3027 -3822 2272 74 0 14 chr2 56347322 56347630 -194340224 - AluSc SINE Alu 0 304 1 7144 124 33 51 chr2 56347630 56347678 -194340176 + L1PA16 LINE L1 3027 3074 -3775 581 117 0 58 chr2 56347681 56347735 -194340119 + AluJ/FLAM SINE Alu 1 48 -264 2452 142 20 50 chr2 56347735 56348236 -194339618 + LTR19A LTR ERV1 1 486 0 581 117 0 58 chr2 56348236 56348284 -194339570 + AluJ/FLAM SINE Alu 48 97 -215 1669 131 22 47 chr2 56348284 56348830 -194339024 + MER4A LTR ERV1 1 664 0 9485 192 26 50 chr2 56348879 56349279 -194338575 + L1PA16 LINE L1 3065 3473 -3396 1621 136 8 12 chr2 56349279 56349572 -194338282 + AluSx SINE Alu 39 330 0 9485 192 26 50 chr2 56349572 56349680 -194338174 + L1PA16 LINE L1 3473 3582 -3287 1868 130 7 57 chr2 56349680 56350003 -194337851 + AluSx SINE Alu 1 308 0 9485 192 26 50 chr2 56350003 56351744 -194336110 + L1PA16 LINE L1 3582 5363 -1506 1182 132 42 0 chr2 56351744 56351934 -194335920 - L1PB1 LINE L1 -1 6150 5953 9485 192 26 50 chr2 56351934 56352725 -194335129 + L1PA16 LINE L1 5363 6003 -866 2129 115 3 3 chr2 56352725 56353021 -194334833 + AluY SINE Alu 1 296 -15 9485 192 26 50 chr2 56353021 56353867 -194333987 + L1PA16 LINE L1 6003 6868 -1 2189 119 3 3 chr2 56354665 56354968 -194332886 - AluSx SINE Alu -9 303 1 331 315 0 0 chr2 56354989 56355081 -194332773 - L1MC4 LINE L1 -1337 6705 6614 1678 126 84 0 chr2 56355100 56355382 -194332472 - AluSq SINE Alu 0 304 1 334 396 41 0 chr2 56355457 56355626 -194332228 + MIR3 SINE MIR 16 191 -17 984 268 79 8 chr2 56355780 56356045 -194331809 + AluJb SINE Alu 1 284 -18 2190 113 0 0 chr2 56356123 56356433 -194331421 - AluSx SINE Alu 0 310 1 2061 115 6 0 chr2 56358863 56359184 -194328670 - L1P4 LINE L1 -415 5746 5424 1974 115 0 24 chr2 56359529 56359840 -194328014 + AluSg SINE Alu 3 306 0 2098 120 7 3 chr2 56360060 56360360 -194327494 - AluSx SINE Alu -11 301 1 2173 111 0 10 chr2 56360370 56360668 -194327186 - AluSx SINE Alu -17 295 1 1762 140 0 0 chr2 56361853 56362110 -194325744 - AluSx SINE Alu -16 296 40 3659 103 0 4 chr2 56362120 56362633 -194325221 - MER9 LTR ERVK 0 511 1 597 204 18 9 chr2 56362882 56362995 -194324859 - L2 LINE L2 0 3313 3200 2202 130 0 0 chr2 56363326 56363627 -194324227 - AluSx SINE Alu -11 301 1 609 249 93 56 chr2 56363818 56364810 -194323044 + L1ME LINE L1 4416 5559 -603 2480 67 0 3 chr2 56364824 56365124 -194322730 + AluY SINE Alu 1 299 -12 1720 146 66 0 chr2 56365131 56365405 -194322449 + AluSx SINE Alu 5 296 -16 509 308 34 4 chr2 56365468 56365702 -194322152 + L1MEc LINE L1 35 275 -6121 210 71 0 0 chr2 56366124 56366152 -194321702 + (A)n Simple_repeat Simple_repeat 1 28 0 716 209 56 31 chr2 56366795 56366991 -194320863 - MER3 DNA MER1_type -8 201 1 1846 186 7 0 chr2 56368074 56368381 -194319473 - AluJb SINE Alu -3 309 1 21 82 0 0 chr2 56368959 56369008 -194318846 + AT_rich Low_complexity Low_complexity 1 49 0 206 243 114 29 chr2 56369738 56369808 -194318046 + MER5C DNA MER1_type 1 76 -248 332 300 75 40 chr2 56371127 56371354 -194316500 + HAL1 LINE L1 1114 1348 -1159 574 254 97 97 chr2 56371407 56371574 -194316280 + HAL1b LINE L1 392 558 -790 883 101 0 36 chr2 56371574 56371712 -194316142 - FLAM_C SINE Alu 0 133 1 574 254 97 97 chr2 56371712 56372041 -194315813 + HAL1b LINE L1 557 888 -460 2072 134 0 0 chr2 56372168 56372466 -194315388 + AluSx SINE Alu 1 298 -14 2312 82 0 35 chr2 56372502 56372821 -194315033 + AluY SINE Alu 1 308 -3 1713 142 48 31 chr2 56374427 56374716 -194313138 + AluJo SINE Alu 3 296 -16 2180 116 17 7 chr2 56374886 56375187 -194312667 - AluSq SINE Alu -9 304 1 21 0 0 0 chr2 56375547 56375568 -194312286 + AT_rich Low_complexity Low_complexity 1 21 0 2089 106 0 0 chr2 56375671 56375945 -194311909 + AluSq SINE Alu 1 274 -39 604 266 21 70 chr2 56376022 56376263 -194311591 - L2 LINE L2 0 3313 3085 428 281 36 22 chr2 56376463 56376602 -194311252 + MIR SINE MIR 122 262 0 1942 200 123 28 chr2 56376938 56377549 -194310305 + L1MC4 LINE L1 7373 8041 -1 2214 208 81 55 chr2 56377583 56378348 -194309506 + L1ME1 LINE L1 5364 6148 -18 307 293 108 36 chr2 56378379 56378546 -194309308 - MIR SINE MIR -50 212 34 26 0 0 0 chr2 56379707 56379733 -194308121 + AT_rich Low_complexity Low_complexity 1 26 0 234 323 0 0 chr2 56380504 56380597 -194307257 + L1ME LINE L1 4520 4612 -1534 2167 126 39 21 chr2 56380654 56381035 -194306819 - MER61D LTR ERV1 0 501 114 4163 191 30 40 chr2 56381414 56382042 -194305812 + L1MC3 LINE L1 6110 6724 -1061 2072 105 42 20 chr2 56382042 56382348 -194305506 - AluSq SINE Alu 0 313 1 4163 191 30 40 chr2 56382348 56382787 -194305067 + L1MC3 LINE L1 6724 7166 -619 307 301 20 48 chr2 56382985 56383131 -194304723 + MIR SINE MIR 32 173 -89 300 236 75 66 chr2 56384157 56384263 -194303591 + L1ME LINE L1 5176 5282 -864 1623 180 0 56 chr2 56384277 56384583 -194303271 + AluJo SINE Alu 1 289 -23 27 0 0 0 chr2 56384583 56384610 -194303244 + AT_rich Low_complexity Low_complexity 1 27 0 463 301 0 6 chr2 56384647 56384803 -194303051 + MLT1K LTR MaLR 434 588 0 1198 161 19 0 chr2 56384846 56385051 -194302803 + MLT2B2 LTR ERVL 2 210 -305 1913 100 2 15 chr2 56385051 56385478 -194302376 + LTR17 LTR ERV1 261 731 -49 5409 52 10 17 chr2 56385505 56386217 -194301637 + HERV17 LTR ERV1 1 707 -7919 1905 78 22 0 chr2 56386406 56386675 -194301179 + HERV17 LTR ERV1 784 1058 -7568 3613 66 0 14 chr2 56386812 56387297 -194300557 + HERV17 LTR ERV1 1537 2014 -6612 * 10038 61 5 1 chr2 56387282 56388602 -194299252 + HERV17 LTR ERV1 2430 3754 -4872 4727 59 3 0 chr2 56388581 56389194 -194298660 + HERV17 LTR ERV1 5405 6019 -2607 * 2252 61 0 3 chr2 56389215 56389508 -194298346 + HERV17 LTR ERV1 8335 8626 0 2166 95 3 6 chr2 56389508 56389833 -194298021 + LTR17 LTR ERV1 1 324 -456 1621 210 19 46 chr2 56389833 56390200 -194297654 + MLT2B3 LTR ERVL 192 548 -6 597 274 0 5 chr2 56390207 56390393 -194297461 + L1ME LINE L1 5624 5808 -313 594 263 139 67 chr2 56390412 56390579 -194297275 - L2 LINE L2 -579 2735 2582 207 0 0 0 chr2 56390579 56390602 -194297252 + (TG)n Simple_repeat Simple_repeat 2 24 0 594 263 139 67 chr2 56390602 56390750 -194297104 - L2 LINE L2 -732 2582 2397 439 267 104 15 chr2 56390726 56390861 -194296993 - MIR SINE MIR -114 148 2 * 1497 170 89 4 chr2 56391510 56391780 -194296074 + AluJb SINE Alu 4 296 -16 308 222 16 0 chr2 56391782 56391845 -194296009 - MER2 DNA MER2_type 0 345 282 * 512 250 5 92 chr2 56391821 56392017 -194295837 - MER8 DNA MER2_type -60 179 1 214 182 0 0 chr2 56392422 56392466 -194295388 + A-rich Low_complexity Low_complexity 1 44 0 390 345 91 14 chr2 56392740 56392960 -194294894 + MIR SINE MIR 20 256 -6 793 185 39 51 chr2 56393020 56393198 -194294656 + MER63B DNA MER1_type 1 176 -260 256 286 48 41 chr2 56393202 56393349 -194294505 + L2 LINE L2 3080 3227 -86 403 304 85 18 chr2 56394910 56395134 -194292720 + L1MC4 LINE L1 7803 8041 -1 450 202 0 0 chr2 56397636 56397720 -194290134 + AluJ/FLAM SINE Alu 1 84 -228 2127 87 23 17 chr2 56397972 56398271 -194289583 + AluSp SINE Alu 1 301 -12 225 0 0 0 chr2 56398906 56398931 -194288923 + (A)n Simple_repeat Simple_repeat 1 25 0 693 202 90 34 chr2 56399403 56399581 -194288273 + MER5A DNA MER1_type 1 188 -1 2098 109 7 0 chr2 56399640 56399947 -194287907 + AluSq SINE Alu 1 309 0 26 50 0 0 chr2 56400356 56400396 -194287458 + AT_rich Low_complexity Low_complexity 1 40 0 2517 42 0 0 chr2 56400594 56400881 -194286973 - AluY SINE Alu -24 287 1 417 208 38 0 chr2 56401105 56401211 -194286643 - L1PA6 LINE L1 -1 6153 6044 507 67 0 67 chr2 56401211 56401301 -194286553 - L1PA12 LINE L1 -107 6061 5978 26 30 0 0 chr2 56401686 56401719 -194286135 + AT_rich Low_complexity Low_complexity 1 33 0 2092 123 7 0 chr2 56401835 56402136 -194285718 - AluSg SINE Alu -7 303 1 2024 145 3 0 chr2 56402163 56402460 -194285394 + AluSx SINE Alu 4 301 -11 21 36 0 0 chr2 56403770 56403798 -194284056 + AT_rich Low_complexity Low_complexity 1 28 0 327 167 42 0 chr2 56403800 56403872 -194283982 - MER72 LTR ERV1 -63 659 585 2304 94 0 3 chr2 56403884 56404183 -194283671 - AluSx SINE Alu -14 298 1 294 143 0 0 chr2 56404193 56404249 -194283605 - L1MA4A LINE L1 -23 6280 6225 1554 178 10 42 chr2 56404934 56405243 -194282611 + AluJo SINE Alu 1 299 -13 2255 107 0 10 chr2 56406272 56406580 -194281274 + AluSx SINE Alu 1 305 -7 529 163 61 0 chr2 56406595 56406693 -194281161 + MER93b LTR ERV1 12 115 -258 5054 142 51 10 chr2 56406697 56407746 -194280108 - L1MA7 LINE L1 0 6291 5201 462 249 32 75 chr2 56407748 56407849 -194280005 + MER93b LTR ERV1 105 209 -164 2246 125 0 0 chr2 56407849 56408144 -194279710 - AluJb SINE Alu -17 295 1 462 249 32 75 chr2 56408144 56408323 -194279531 + MER93b LTR ERV1 209 373 0 248 272 95 41 chr2 56408742 56408889 -194278965 - L2 LINE L2 -25 3288 3134 1637 209 7 0 chr2 56408909 56409210 -194278644 + AluJo SINE Alu 5 307 -5 409 247 0 0 chr2 56409305 56409390 -194278464 - MIR SINE MIR 0 262 178 260 200 0 0 chr2 56409435 56409480 -194278374 - MIR SINE MIR -12 250 206 1940 142 7 17 chr2 56409534 56409836 -194278018 + AluJb SINE Alu 1 299 -13 2229 108 3 0 chr2 56409905 56410201 -194277653 - AluSp SINE Alu -15 298 2 1037 171 0 17 chr2 56410362 56410612 -194277242 + AluJb SINE Alu 1 310 0 1823 135 53 4 chr2 56411199 56411480 -194276374 - AluSq SINE Alu -18 295 1 700 292 129 28 chr2 56411835 56412400 -194275454 + HAL1 LINE L1 1251 1872 -635 982 134 29 12 chr2 56412642 56412814 -194275040 + MER4B LTR ERV1 432 606 -4 1995 200 24 24 chr2 56412823 56413288 -194274566 - MLT1C LTR MaLR -2 465 1 679 257 284 12 chr2 56413288 56413766 -194274088 + L2 LINE L2 2651 3279 -34 2121 112 10 7 chr2 56413968 56414272 -194273582 + AluSx SINE Alu 1 305 -7 269 26 26 0 chr2 56415533 56415571 -194272283 + (TCC)n Simple_repeat Simple_repeat 3 41 0 225 0 0 0 chr2 56416778 56416803 -194271051 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 1630 170 21 3 chr2 56416804 56417093 -194270761 - AluJo SINE Alu -6 306 13 2275 116 0 0 chr2 56417521 56417824 -194270030 + AluSg SINE Alu 1 303 -7 755 206 8 0 chr2 56417836 56417967 -194269887 - FAM SINE Alu -53 132 1 2155 139 10 0 chr2 56418144 56418453 -194269401 + AluSx SINE Alu 1 312 0 2083 107 3 17 chr2 56418516 56418805 -194269049 - AluSx SINE Alu -27 285 1 625 186 31 16 chr2 56419051 56419180 -194268674 - FLAM_C SINE Alu -12 131 1 216 0 0 0 chr2 56420314 56420338 -194267516 + (A)n Simple_repeat Simple_repeat 1 24 0 2055 70 0 21 chr2 56420338 56420624 -194267230 - AluY SINE Alu -31 280 1 451 129 301 0 chr2 56420624 56420717 -194267137 - FLAM_A SINE Alu -9 133 13 513 268 131 20 chr2 56420805 56421003 -194266851 + MIR SINE MIR 3 222 -40 1704 151 42 0 chr2 56421143 56421428 -194266426 + AluJb SINE Alu 1 297 -15 728 200 137 16 chr2 56421767 56421957 -194265897 + MER58A DNA MER1_type 1 213 -11 651 159 0 0 chr2 56422012 56422119 -194265735 - FLAM_A SINE Alu -1 141 35 1620 176 39 27 chr2 56422257 56422592 -194265262 + L1PA16 LINE L1 5808 6146 -20 2421 100 0 0 chr2 56423051 56423360 -194264494 - AluSc SINE Alu 0 309 1 195 307 136 11 chr2 56423618 56423706 -194264148 + MIR3 SINE MIR 3 101 -107 1535 129 3 65 chr2 56424518 56424812 -194263042 - L1PA15 LINE L1 -2 6163 5888 1676 195 40 7 chr2 56424855 56425157 -194262697 - AluJb SINE Alu 0 312 1 2251 121 0 9 chr2 56425287 56425602 -194262252 - AluSx SINE Alu 0 312 1 2293 85 3 0 chr2 56426322 56426616 -194261238 + AluY SINE Alu 1 295 -16 1732 166 7 20 chr2 56426677 56426973 -194260881 - AluJb SINE Alu -20 292 1 21 0 0 0 chr2 56427167 56427188 -194260666 + AT_rich Low_complexity Low_complexity 1 21 0 287 345 67 8 chr2 56427862 56427981 -194259873 + L2 LINE L2 3147 3272 0 327 296 138 25 chr2 56428395 56428482 -194259372 - MIR SINE MIR -13 249 173 714 231 151 35 chr2 56428482 56428794 -194259060 - MER7A DNA MER2_type 0 346 1 327 296 138 25 chr2 56428794 56428902 -194258952 - MIR SINE MIR -89 173 32 911 169 0 0 chr2 56431161 56431303 -194256551 - AluSg/x SINE Alu -34 276 135 1321 159 107 59 chr2 56431891 56432162 -194255692 + AluJo SINE Alu 3 286 -16 1959 147 3 6 chr2 56432255 56432567 -194255287 + AluSx SINE Alu 1 311 -1 3396 77 58 78 chr2 56432587 56432656 -194255198 - L1MA2 LINE L1 0 6304 6235 1717 156 0 70 chr2 56432656 56432983 -194254871 - AluSx SINE Alu -8 304 1 3396 77 58 78 chr2 56432983 56433397 -194254457 - L1MA2 LINE L1 -69 6235 5831 2157 90 3 84 chr2 56433397 56433729 -194254125 - AluSx SINE Alu -7 305 1 3396 77 58 78 chr2 56433729 56433792 -194254062 - L1MA2 LINE L1 -473 5831 5768 858 146 0 0 chr2 56433800 56433923 -194253931 - FLAM_C SINE Alu -18 125 3 2955 80 3 0 chr2 56433929 56434315 -194253539 - L1M1 LINE L1 -523 5781 5395 235 349 84 16 chr2 56435264 56435513 -194252341 + L2 LINE L2 2476 2741 -573 1105 116 0 0 chr2 56435819 56435965 -194251889 - AluSg/x SINE Alu -18 292 147 1821 145 35 0 chr2 56436132 56436252 -194251602 + AluSx SINE Alu 1 115 -197 261 0 0 0 chr2 56436252 56436281 -194251573 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1821 145 35 0 chr2 56436281 56436449 -194251405 + AluSx SINE Alu 115 299 -13 942 101 0 0 chr2 56437217 56437336 -194250518 - FLAM_C SINE Alu -24 119 1 948 163 0 19 chr2 56438006 56438166 -194249688 + AluSg/x SINE Alu 130 286 -24 2173 85 28 11 chr2 56438181 56438464 -194249390 + AluSx SINE Alu 1 288 -24 905 135 0 0 chr2 56438595 56438721 -194249133 + FLAM_C SINE Alu 1 126 -17 216 0 0 0 chr2 56439164 56439188 -194248666 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 667 286 123 17 chr2 56439439 56439891 -194247963 - L1MC4a LINE L1 -216 5905 5462 901 234 90 5 chr2 56439971 56440193 -194247661 - MIR SINE MIR -20 242 2 2149 104 13 3 chr2 56440320 56440618 -194247236 - AluSp SINE Alu -8 305 5 215 175 32 48 chr2 56440689 56440752 -194247102 + GA-rich Low_complexity Low_complexity 2 63 0 594 236 192 5 chr2 56441635 56441843 -194246011 + MIR SINE MIR 2 248 -14 1236 53 20 0 chr2 56442199 56442350 -194245504 - L1PA2 LINE L1 -1 6154 6001 23 33 0 0 chr2 56442798 56442828 -194245026 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 56443136 56443166 -194244688 + AT_rich Low_complexity Low_complexity 1 30 0 2511 84 3 0 chr2 56443403 56443713 -194244141 - AluSx SINE Alu -1 311 1 1112 220 47 32 chr2 56443823 56444100 -194243754 - L1ME3 LINE L1 -1 6956 6676 1043 158 0 0 chr2 56444144 56444309 -194243545 - L1MA4A LINE L1 -1 6302 6138 826 172 0 15 chr2 56444395 56444529 -194243325 - FLAM_C SINE Alu -3 140 9 919 168 0 0 chr2 56444530 56444667 -194243187 - AluSc SINE Alu -53 256 120 2283 99 0 10 chr2 56444673 56444977 -194242877 - AluSx SINE Alu -11 301 1 608 217 46 17 chr2 56444978 56445153 -194242701 - L1ME3 LINE L1 -950 5991 5812 * 804 260 134 12 chr2 56445143 56445531 -194242323 - L1ME3 LINE L1 -4899 1524 1501 2297 113 0 0 chr2 56445531 56445840 -194242014 - AluY SINE Alu -2 309 1 804 260 134 12 chr2 56445840 56445961 -194241893 - L1ME3 LINE L1 -4922 1501 1396 559 180 90 41 chr2 56447466 56447588 -194240266 - FLAM_A SINE Alu -3 139 12 2205 198 138 43 chr2 56447657 56448315 -194239539 - MER21B LTR ERV1 -45 818 98 341 293 0 0 chr2 56448383 56448458 -194239396 - MER21B LTR ERV1 -768 95 21 361 314 88 13 chr2 56448464 56448623 -194239231 + MIR SINE MIR 65 235 -27 2009 140 3 3 chr2 56448689 56448981 -194238873 - AluSx SINE Alu -20 292 1 818 120 60 0 chr2 56449277 56449410 -194238444 + FAM SINE Alu 29 169 -16 231 261 34 80 chr2 56449667 56449692 -194238162 + MER5A DNA MER1_type 78 103 -86 2305 102 3 0 chr2 56449692 56449985 -194237869 - AluSg SINE Alu -16 294 1 231 261 34 80 chr2 56449985 56450047 -194237807 + MER5A DNA MER1_type 103 161 -28 1930 150 7 0 chr2 56450281 56450588 -194237266 - AluJo SINE Alu -3 309 1 920 168 0 0 chr2 56450921 56451070 -194236784 - FRAM SINE Alu -22 154 6 404 233 50 3 chr2 56451199 56451359 -194236495 - 7SLRNA srpRNA srpRNA -106 214 6 439 280 200 0 chr2 56451460 56451685 -194236169 + Charlie7 DNA MER1_type 32 301 -2311 2395 86 0 0 chr2 56451763 56452064 -194235790 + AluSx SINE Alu 3 303 -9 2241 96 3 16 chr2 56452206 56452519 -194235335 + AluSp SINE Alu 2 310 -3 2083 96 7 0 chr2 56452751 56453060 -194234794 - AluSp SINE Alu 0 311 1 729 176 0 17 chr2 56453350 56453469 -194234385 - AluJo SINE Alu -176 136 20 36 0 0 0 chr2 56453574 56453610 -194234244 + AT_rich Low_complexity Low_complexity 1 36 0 1852 164 3 0 chr2 56453629 56453927 -194233927 + AluJo SINE Alu 1 299 -13 2325 69 7 3 chr2 56453932 56454223 -194233631 + AluSc SINE Alu 1 292 -17 283 86 0 0 chr2 56454298 56454333 -194233521 + U2 snRNA snRNA 1 35 -153 183 182 0 0 chr2 56454794 56454827 -194233027 + L2 LINE L2 3281 3313 0 1837 179 0 3 chr2 56455821 56456122 -194231732 + AluJb SINE Alu 1 300 -12 370 278 90 0 chr2 56456655 56456788 -194231066 - L2 LINE L2 0 3313 3169 1361 224 35 43 chr2 56456801 56457171 -194230683 + MLT1A2 LTR MaLR 4 370 -4 1843 314 49 13 chr2 56457269 56458054 -194229800 - L2 LINE L2 -270 3002 2190 2220 100 10 3 chr2 56458471 56458780 -194229074 - AluSx SINE Alu -1 311 1 942 105 0 0 chr2 56459030 56459154 -194228700 - AluSq/x SINE Alu -189 124 1 693 146 173 0 chr2 56459175 56459285 -194228569 - FLAM_C SINE Alu -4 129 1 1724 172 3 16 chr2 56459533 56459836 -194228018 - AluJo SINE Alu -13 299 1 667 307 55 14 chr2 56460192 56460482 -194227372 + L1M4 LINE L1 2644 2945 -3201 2387 81 7 3 chr2 56460556 56460854 -194227000 + AluSx SINE Alu 1 299 -13 744 283 105 16 chr2 56460909 56461210 -194226644 + MLT1I LTR MaLR 86 409 0 6680 134 21 19 chr2 56461236 56461495 -194226359 + L1MA8 LINE L1 4117 4374 -1917 1804 174 26 10 chr2 56461495 56461799 -194226055 + AluJb SINE Alu 1 309 -3 6680 134 21 19 chr2 56461799 56462828 -194225026 + L1MA8 LINE L1 4374 5411 -880 2213 57 6 70 chr2 56462828 56463144 -194224710 + AluY SINE Alu 1 296 -15 6680 134 21 19 chr2 56463144 56463982 -194223872 + L1MA8 LINE L1 5411 6246 -45 2567 51 0 0 chr2 56463984 56464279 -194223575 - AluY SINE Alu -16 295 1 2795 140 29 0 chr2 56464300 56464714 -194223140 + MSTB LTR MaLR 1 426 0 1041 231 163 58 chr2 56464745 56464762 -194223092 + L1M4 LINE L1 3256 3270 -2876 2192 122 0 0 chr2 56464762 56465085 -194222769 + AluSx SINE Alu 1 312 0 1041 231 163 58 chr2 56465085 56465575 -194222279 + L1M4 LINE L1 3270 3707 -2439 1217 192 131 4 chr2 56465575 56465835 -194222019 - AluJb SINE Alu -19 293 1 1041 231 163 58 chr2 56465835 56465923 -194221931 + L1M4 LINE L1 3707 3784 -2362 2376 77 0 3 chr2 56465923 56466223 -194221631 + AluY SINE Alu 1 299 -12 1041 231 163 58 chr2 56466223 56466479 -194221375 + L1M4 LINE L1 3784 4198 -1948 1743 176 33 0 chr2 56466486 56466787 -194221067 + AluJb SINE Alu 2 312 0 2067 126 10 0 chr2 56467027 56467321 -194220533 + AluSx SINE Alu 1 297 -15 757 158 34 7 chr2 56467367 56467513 -194220341 - L1MA7 LINE L1 -2 6289 6140 268 333 145 7 chr2 56467541 56467679 -194220175 - MIR SINE MIR -102 160 4 636 128 0 46 chr2 56467749 56467786 -194220068 - U13 snRNA snRNA 0 104 67 1992 137 153 26 chr2 56467786 56468166 -194219688 + MSTA LTR MaLR 1 428 0 636 128 0 46 chr2 56468166 56468237 -194219617 - U13 snRNA snRNA -37 67 1 1068 139 139 6 chr2 56468609 56468789 -194219065 + AluJb SINE Alu 87 290 -22 586 211 32 0 chr2 56468797 56468953 -194218901 + GA-rich Low_complexity Low_complexity 1 161 0 983 75 5 43 chr2 56468954 56469141 -194218713 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 252 0 0 0 chr2 56469141 56469169 -194218685 + (GGAGA)n Simple_repeat Simple_repeat 1 28 0 423 273 48 80 chr2 56469483 56469732 -194218122 + L1MEd LINE L1 516 756 -5363 2294 99 3 10 chr2 56469831 56470145 -194217709 - AluSp SINE Alu 0 313 2 1466 147 5 0 chr2 56470203 56470421 -194217433 - AluSg/x SINE Alu -7 305 87 339 167 0 0 chr2 56470422 56470470 -194217384 - Alu SINE Alu -254 48 1 490 245 140 46 chr2 56470493 56470649 -194217205 + L1MEd LINE L1 939 1079 -5231 2470 66 7 0 chr2 56470649 56470951 -194216903 + AluY SINE Alu 2 305 -6 490 245 140 46 chr2 56470951 56471232 -194216622 + L1MEd LINE L1 1079 1427 -4883 2286 107 0 3 chr2 56471232 56471532 -194216322 - AluSx SINE Alu -13 299 1 490 245 140 46 chr2 56471532 56471586 -194216268 + L1MEd LINE L1 1427 1475 -4835 216 0 0 0 chr2 56471594 56471618 -194216236 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 621 129 43 0 chr2 56471719 56471812 -194216042 + AluJb SINE Alu 208 304 -8 332 287 43 0 chr2 56471816 56471931 -194215923 + L1MEd LINE L1 1550 1669 -4641 1492 178 66 14 chr2 56471973 56472259 -194215595 + AluJo SINE Alu 1 301 -11 315 71 0 0 chr2 56472262 56472304 -194215550 + (GGAA)n Simple_repeat Simple_repeat 4 45 0 31 0 0 0 chr2 56472387 56472418 -194215436 + AT_rich Low_complexity Low_complexity 1 31 0 1609 136 23 68 chr2 56472419 56472727 -194215127 + AluJo SINE Alu 1 294 -18 1428 158 50 60 chr2 56472768 56473066 -194214788 + AluJb SINE Alu 1 295 -17 521 290 162 35 chr2 56473503 56473654 -194214200 + L2 LINE L2 2707 2837 -476 2101 125 7 0 chr2 56473654 56473950 -194213904 - AluSx SINE Alu -10 302 5 521 290 162 35 chr2 56473950 56474197 -194213657 + L2 LINE L2 2837 3139 -174 1132 120 188 0 chr2 56474239 56474431 -194213423 + Tigger7 DNA MER2_type 2345 2572 -15 353 212 239 0 chr2 56474461 56474574 -194213280 + L2 LINE L2 3173 3312 -1 2299 111 0 0 chr2 56474784 56475091 -194212763 - AluSx SINE Alu -5 307 1 22 94 0 0 chr2 56475119 56475183 -194212671 + AT_rich Low_complexity Low_complexity 1 64 0 1441 169 52 15 chr2 56475642 56475909 -194211945 - AluJb SINE Alu -9 303 27 2233 100 21 0 chr2 56476047 56476338 -194211516 + AluSx SINE Alu 1 297 -15 900 78 0 0 chr2 56477007 56477123 -194210731 + FLAM_C SINE Alu 19 134 -9 252 171 0 0 chr2 56477937 56477978 -194209876 - AluSq/x SINE Alu -157 145 105 2116 120 7 7 chr2 56478184 56478485 -194209369 + AluSg SINE Alu 1 301 -9 207 162 0 0 chr2 56478485 56478522 -194209332 + GA-rich Low_complexity Low_complexity 1 37 0 2142 138 0 0 chr2 56478805 56479103 -194208751 + AluSx SINE Alu 1 298 -14 1952 116 45 3 chr2 56479751 56480043 -194207811 + AluSx SINE Alu 1 304 -8 2321 106 6 3 chr2 56480080 56480392 -194207462 - AluSq SINE Alu 0 313 1 2558 83 0 0 chr2 56480589 56480902 -194206952 + AluSp SINE Alu 1 313 0 811 161 0 0 chr2 56480914 56481038 -194206816 - FLAM_A SINE Alu -9 124 1 728 197 0 0 chr2 56483405 56483527 -194204327 - FLAM_A SINE Alu -11 122 1 259 341 35 0 chr2 56484478 56484563 -194203291 - L2 LINE L2 0 3313 3226 2848 9 0 12 chr2 56485354 56485674 -194202180 - AluYb8 SINE Alu -2 316 1 842 178 0 0 chr2 56486156 56486285 -194201569 - FLAM_C SINE Alu -14 129 1 747 241 169 0 chr2 56486370 56486577 -194201277 - MIR SINE MIR -14 248 7 364 224 10 61 chr2 56486625 56486723 -194201131 - MIR SINE MIR -16 246 154 369 0 0 0 chr2 56486810 56486851 -194201003 + (CA)n Simple_repeat Simple_repeat 2 42 0 277 220 80 70 chr2 56487609 56487709 -194200145 - MIR SINE MIR -76 186 86 379 269 223 56 chr2 56488094 56488521 -194199333 + L1M2 LINE L1 863 1360 -5489 191 81 54 0 chr2 56489538 56489575 -194198279 + A-rich Low_complexity Low_complexity 2 40 0 234 290 65 0 chr2 56490371 56490464 -194197390 + L1ME LINE L1 5687 5785 -336 1526 144 133 4 chr2 56490542 56490805 -194197049 - AluJo SINE Alu -15 297 1 21 0 0 0 chr2 56490805 56490826 -194197028 + AT_rich Low_complexity Low_complexity 1 21 0 184 122 0 73 chr2 56490899 56490940 -194196914 - L3 LINE CR1 -303 1274 1237 222 224 30 75 chr2 56491395 56491462 -194196392 + MER5A DNA MER1_type 10 73 -116 203 194 250 14 chr2 56491425 56491497 -194196357 - MER5A DNA MER1_type -25 164 76 * 237 283 43 51 chr2 56491498 56491636 -194196218 + MER5B DNA MER1_type 3 139 -39 1728 157 11 14 chr2 56491846 56492126 -194195728 + AluSx SINE Alu 4 282 -30 703 201 115 0 chr2 56492173 56492347 -194195507 + MER3 DNA MER1_type 16 209 0 278 196 0 0 chr2 56492304 56492360 -194195494 - MER3 DNA MER1_type -119 90 35 * 23 33 0 0 chr2 56493143 56493173 -194194681 + AT_rich Low_complexity Low_complexity 1 30 0 1696 165 3 41 chr2 56495484 56495630 -194192224 + AluJb SINE Alu 1 151 -161 1830 163 20 0 chr2 56495630 56495930 -194191924 + AluSx SINE Alu 1 306 -6 1696 165 3 41 chr2 56495930 56496098 -194191756 + AluJb SINE Alu 151 303 -9 1787 162 21 3 chr2 56496582 56496866 -194190988 + AluSx SINE Alu 1 289 -23 579 60 84 6 chr2 56496866 56497032 -194190822 + (TA)n Simple_repeat Simple_repeat 2 180 0 2274 96 13 22 chr2 56498770 56499083 -194188771 - AluY SINE Alu -1 310 1 862 107 7 50 chr2 56499203 56499343 -194188511 - AluJo SINE Alu -178 134 1 249 284 35 26 chr2 56499350 56499466 -194188388 - L1ME LINE L1 -460 5661 5545 2272 78 3 14 chr2 56499666 56499961 -194187893 - AluY SINE Alu -19 292 1 2245 97 3 0 chr2 56500140 56500430 -194187424 + AluSq SINE Alu 1 291 -22 21 0 0 0 chr2 56500888 56500909 -194186945 + AT_rich Low_complexity Low_complexity 1 21 0 1555 191 0 4 chr2 56500909 56501176 -194186678 + AluJb SINE Alu 44 309 -3 22 56 0 0 chr2 56501281 56501317 -194186537 + AT_rich Low_complexity Low_complexity 1 36 0 2438 66 7 3 chr2 56501366 56501667 -194186187 + AluY SINE Alu 1 302 -9 182 257 68 40 chr2 56502184 56502258 -194185596 - MIR SINE MIR -96 166 91 1523 223 14 7 chr2 56502371 56502667 -194185187 - AluJo SINE Alu -14 298 1 2058 112 10 13 chr2 56503066 56503369 -194184485 + AluSq SINE Alu 1 302 -11 235 221 59 0 chr2 56503823 56503889 -194183965 - MIR SINE MIR -105 103 36 782 250 96 57 chr2 56504266 56504899 -194182955 - L1MC5 LINE L1 -48 7913 7256 1751 169 16 29 chr2 56505121 56505428 -194182426 - AluJo SINE Alu -7 305 3 22 0 0 0 chr2 56505515 56505537 -194182317 + AT_rich Low_complexity Low_complexity 1 22 0 1127 168 32 50 chr2 56505616 56505836 -194182018 + AluJo SINE Alu 81 296 -16 824 185 22 38 chr2 56505952 56506203 -194181651 - MER31B LTR ERV1 -193 292 1 394 306 144 33 chr2 56506330 56506495 -194181359 + L1MC/D LINE L1 5417 5562 -2246 6933 112 18 15 chr2 56506495 56507563 -194180291 + MER11C LTR ERVK 1 1071 0 394 306 144 33 chr2 56507563 56507730 -194180124 + L1MC/D LINE L1 5562 5786 -2022 830 123 0 0 chr2 56508125 56508239 -194179615 + AluJb SINE Alu 199 312 0 1031 179 22 36 chr2 56508582 56508805 -194179049 + AluJo SINE Alu 1 220 -92 281 306 122 14 chr2 56509863 56510010 -194177844 - MIR SINE MIR -41 221 59 1849 128 57 0 chr2 56510010 56510291 -194177563 - AluSx SINE Alu -15 297 1 202 143 24 0 chr2 56510419 56510461 -194177393 + (TA)n Simple_repeat Simple_repeat 2 44 0 235 236 56 11 chr2 56510574 56510663 -194177191 + L1ME LINE L1 5620 5712 -409 206 309 0 0 chr2 56510672 56510727 -194177127 - MIR SINE MIR -10 252 198 694 280 10 21 chr2 56510876 56511069 -194176785 - MIR SINE MIR -59 203 13 214 71 48 24 chr2 56511302 56511344 -194176510 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 24 32 0 0 chr2 56511599 56511630 -194176224 + AT_rich Low_complexity Low_complexity 1 31 0 1228 160 156 12 chr2 56511650 56511894 -194175960 + AluJo SINE Alu 12 290 -22 718 270 66 87 chr2 56512085 56512418 -194175436 + L2 LINE L2 2072 2397 -917 2459 86 0 0 chr2 56512614 56512916 -194174938 - AluSc SINE Alu -7 302 1 3156 172 95 44 chr2 56514368 56514533 -194173321 + L1MB4 LINE L1 5152 5307 -873 1535 147 87 4 chr2 56514533 56514785 -194173069 + AluJo SINE Alu 1 273 -39 3156 172 95 44 chr2 56514785 56515592 -194172262 + L1MB4 LINE L1 5307 6180 0 1485 176 73 0 chr2 56517300 56517572 -194170282 - AluJo SINE Alu -20 292 1 2059 134 6 29 chr2 56517614 56517965 -194169889 + MER2 DNA MER2_type 2 344 0 261 105 0 0 chr2 56518334 56518372 -194169482 - L1P5 LINE L1 -263 5888 5851 1629 206 3 3 chr2 56518727 56519014 -194168840 - AluJo SINE Alu -25 287 1 1958 159 3 0 chr2 56519153 56519454 -194168400 + AluSx SINE Alu 1 302 -10 339 291 220 0 chr2 56519693 56519834 -194168020 - MER5A DNA MER1_type -6 183 12 480 129 12 0 chr2 56519848 56519933 -194167921 + L1MA4 LINE L1 6204 6289 -11 23 33 0 0 chr2 56519945 56519975 -194167879 + AT_rich Low_complexity Low_complexity 1 30 0 1674 133 37 37 chr2 56519986 56520286 -194167568 + AluSg SINE Alu 1 300 -10 239 154 15 0 chr2 56520297 56520362 -194167492 + GA-rich Low_complexity Low_complexity 3 68 0 238 320 76 25 chr2 56520777 56520974 -194166880 - MER102b DNA MER1_type -9 332 126 1061 153 34 80 chr2 56521693 56521955 -194165899 + MER2 DNA MER2_type 1 250 -95 1981 173 0 0 chr2 56522672 56522979 -194164875 - AluJb SINE Alu -5 307 1 446 210 28 66 chr2 56524580 56524761 -194163093 - L1MC4 LINE L1 -228 7814 7641 228 119 17 51 chr2 56524758 56524817 -194163037 + L1MC4 LINE L1 7610 7666 -376 * 231 273 34 0 chr2 56524840 56524928 -194162926 - HAL1b LINE L1 -24 1324 1234 285 338 18 4 chr2 56525463 56525568 -194162286 + L2 LINE L2 2914 3019 -253 2294 90 10 3 chr2 56525575 56525876 -194161978 - AluSp SINE Alu -10 303 1 351 0 0 0 chr2 56527041 56527080 -194160774 + (CA)n Simple_repeat Simple_repeat 1 39 0 2021 133 3 3 chr2 56527473 56527773 -194160081 - AluJb SINE Alu -12 300 1 2153 124 0 0 chr2 56527943 56528233 -194159621 + AluSx SINE Alu 1 290 -22 1188 174 55 4 chr2 56528448 56528684 -194159170 + L1MB5 LINE L1 5815 6062 -112 1072 173 153 52 chr2 56528684 56528933 -194158921 + AluJo SINE Alu 1 274 -38 424 221 61 15 chr2 56528961 56529092 -194158762 + L1MB7 LINE L1 6048 6184 0 1774 187 10 0 chr2 56530198 56530492 -194157362 + AluJb SINE Alu 4 300 -12 218 272 94 72 chr2 56530809 56530989 -194156865 + L2 LINE L2 1777 1960 -1354 726 196 105 87 chr2 56531081 56531300 -194156554 - MER58A DNA MER1_type 0 224 2 316 266 98 22 chr2 56532229 56532413 -194155441 + L1MC4 LINE L1 7844 8041 -1 2303 82 3 0 chr2 56533118 56533410 -194154444 + AluSx SINE Alu 5 297 -15 1884 98 49 18 chr2 56533452 56533737 -194154117 - AluSx SINE Alu -18 294 1 1351 175 9 5 chr2 56533826 56534049 -194153805 + AluJo SINE Alu 1 224 -88 840 194 0 63 chr2 56534076 56534251 -194153603 + FRAM SINE Alu 10 173 -3 1043 173 0 16 chr2 56534251 56534436 -194153418 - MER46A DNA MER2_type -25 211 30 24 32 0 0 chr2 56537471 56537502 -194150352 + AT_rich Low_complexity Low_complexity 1 31 0 1786 138 0 34 chr2 56538085 56538396 -194149458 + AluSx SINE Alu 1 301 0 793 223 160 10 chr2 56540521 56540727 -194147127 - MER8 DNA MER2_type -1 238 2 1468 182 3 30 chr2 56540865 56541161 -194146693 - AluJo SINE Alu -12 300 13 2210 101 3 0 chr2 56543008 56543296 -194144558 + AluSg SINE Alu 1 289 -21 1681 186 3 14 chr2 56543562 56543858 -194143996 + AluJo SINE Alu 1 293 -19 702 124 67 0 chr2 56543862 56543967 -194143887 + FLAM_C SINE Alu 6 117 -26 1980 149 0 14 chr2 56544196 56544491 -194143363 + AluSq SINE Alu 1 291 -22 1184 114 28 0 chr2 56544493 56544669 -194143185 + AluSg/x SINE Alu 120 300 -10 24 85 0 0 chr2 56545409 56545468 -194142386 + AT_rich Low_complexity Low_complexity 1 59 0 36 62 0 0 chr2 56545480 56545544 -194142310 + AT_rich Low_complexity Low_complexity 1 64 0 1339 163 56 20 chr2 56546748 56547000 -194140854 - AluJb SINE Alu -3 309 49 21 36 0 0 chr2 56548237 56548265 -194139589 + AT_rich Low_complexity Low_complexity 1 28 0 1648 84 0 0 chr2 56549750 56549952 -194137902 - AluSg SINE Alu -108 202 1 2694 10 0 0 chr2 56549994 56550288 -194137566 + AluYa5 SINE Alu 1 294 -17 2270 83 33 0 chr2 56550298 56550599 -194137255 + AluY SINE Alu 1 311 0 2070 132 30 0 chr2 56552048 56552351 -194135503 + AluSx SINE Alu 1 312 0 1121 55 0 0 chr2 56553032 56553177 -194134677 - L1PA5 LINE L1 -1 6153 6009 2401 220 61 29 chr2 56553182 56553806 -194134048 + MER82 DNA MER2_type 1 644 -9 1791 136 0 26 chr2 56554799 56555071 -194132783 + AluSx SINE Alu 1 265 -47 2187 125 6 3 chr2 56555099 56555410 -194132444 + AluSx SINE Alu 1 312 0 2064 128 3 13 chr2 56556072 56556377 -194131477 + AluSx SINE Alu 1 302 -10 23 68 0 0 chr2 56556387 56556431 -194131423 + AT_rich Low_complexity Low_complexity 1 44 0 1345 154 141 30 chr2 56556868 56557173 -194130681 + MER44D DNA MER2_type 1 609 0 2128 123 0 3 chr2 56557290 56557591 -194130263 + AluSx SINE Alu 1 300 -12 1452 188 11 15 chr2 56557719 56557990 -194129864 - AluJb SINE Alu -30 282 13 2109 124 0 0 chr2 56558143 56558468 -194129386 + AluSx SINE Alu 1 325 0 191 245 208 0 chr2 56559162 56559215 -194128639 + MIR SINE MIR 38 101 -107 2112 100 28 0 chr2 56559403 56559693 -194128161 + AluSq SINE Alu 1 298 -15 23 0 0 0 chr2 56560893 56560916 -194126938 + AT_rich Low_complexity Low_complexity 1 23 0 2076 87 8 0 chr2 56561546 56561811 -194126043 + AluSx SINE Alu 44 310 -2 1471 186 14 21 chr2 56561811 56562089 -194125765 - AluJo SINE Alu -35 277 1 26 0 0 0 chr2 56563638 56563664 -194124190 + AT_rich Low_complexity Low_complexity 1 26 0 1088 130 6 12 chr2 56564305 56564474 -194123380 - AluSg/x SINE Alu -16 296 129 1624 192 27 10 chr2 56566123 56566415 -194121439 + AluJb SINE Alu 1 297 -15 244 307 139 0 chr2 56566670 56566771 -194121083 + MIR3 SINE MIR 92 206 -2 763 187 0 8 chr2 56566882 56567016 -194120838 - FLAM_A SINE Alu 0 133 1 198 265 44 0 chr2 56567440 56567508 -194120346 - MIR SINE MIR -68 140 70 30 59 0 0 chr2 56567763 56567814 -194120040 + AT_rich Low_complexity Low_complexity 1 51 0 787 178 0 7 chr2 56567851 56567986 -194119868 + AluJo SINE Alu 1 134 -178 866 74 27 0 chr2 56569259 56569408 -194118446 + (TA)n Simple_repeat Simple_repeat 2 154 0 411 273 218 27 chr2 56570884 56571104 -194116750 + MIR SINE MIR 1 262 0 2288 97 0 16 chr2 56571967 56572275 -194115579 + AluSq SINE Alu 2 304 -9 2054 132 0 7 chr2 56572571 56572867 -194114987 - AluSx SINE Alu -18 294 1 25 65 0 0 chr2 56572875 56572921 -194114933 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr2 56573387 56573409 -194114445 + AT_rich Low_complexity Low_complexity 1 22 0 291 331 19 5 chr2 56573874 56573996 -194113858 + GA-rich Low_complexity Low_complexity 1 123 0 265 216 196 10 chr2 56574270 56574367 -194113487 + MER20B DNA MER1_type 669 783 0 318 119 0 0 chr2 56574821 56574863 -194112991 + 5S rRNA rRNA 1 42 -79 1654 136 7 61 chr2 56575021 56575315 -194112539 + AluJb SINE Alu 1 278 -34 324 120 0 0 chr2 56575318 56575368 -194112486 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 2351 76 0 3 chr2 56575831 56576132 -194111722 + AluY SINE Alu 1 300 -11 2189 115 0 0 chr2 56576141 56576436 -194111418 + AluSx SINE Alu 1 295 -17 639 179 4 32 chr2 56577685 56577853 -194110001 + L1MB1 LINE L1 5644 5803 -365 1276 169 160 0 chr2 56577975 56578286 -194109568 + L1MB1 LINE L1 5801 6164 -7 1764 154 0 36 chr2 56578400 56578706 -194109148 + AluJb SINE Alu 1 295 -17 21 0 0 0 chr2 56578860 56578881 -194108973 + AT_rich Low_complexity Low_complexity 1 21 0 2475 84 3 0 chr2 56578967 56579276 -194108578 + AluSp SINE Alu 1 310 -3 2170 94 0 24 chr2 56579491 56579788 -194108066 - AluSg SINE Alu -19 291 2 1257 147 45 9 chr2 56580022 56580246 -194107608 + MER46A DNA MER2_type 1 232 -4 931 97 0 24 chr2 56580561 56580685 -194107169 + AluSq/x SINE Alu 1 121 -192 2039 96 0 11 chr2 56580685 56580967 -194106887 + AluSc SINE Alu 18 296 -13 261 65 0 0 chr2 56581057 56581088 -194106766 - MER1B DNA MER1_type 0 329 299 * 1351 158 0 23 chr2 56581087 56581308 -194106546 - MER1B DNA MER1_type -79 218 3 363 171 276 20 chr2 56581579 56581778 -194106076 + L1M4 LINE L1 5081 5330 -816 789 151 36 14 chr2 56581781 56581920 -194105934 + FLAM_C SINE Alu 2 143 0 2380 89 0 0 chr2 56582455 56582758 -194105096 + AluSg SINE Alu 1 303 -7 756 176 0 22 chr2 56582766 56582902 -194104952 + AluJo SINE Alu 2 134 -178 1962 137 10 7 chr2 56582964 56583256 -194104598 + AluSx SINE Alu 1 293 -19 1645 177 32 7 chr2 56583310 56583593 -194104261 + AluJb SINE Alu 6 295 -17 1094 114 102 0 chr2 56583718 56583894 -194103960 - MER30 DNA MER1_type -36 194 1 1530 211 6 10 chr2 56584047 56584360 -194103494 + AluJo SINE Alu 1 312 0 831 117 0 117 chr2 56584390 56584544 -194103310 + AluJo SINE Alu 1 136 -176 216 0 0 0 chr2 56584544 56584568 -194103286 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2213 99 7 3 chr2 56584654 56584948 -194102906 + AluSq SINE Alu 1 295 -18 1164 122 0 0 chr2 56584992 56585148 -194102706 - AluSg/x SINE Alu -24 286 131 21 71 0 0 chr2 56585151 56585193 -194102661 + AT_rich Low_complexity Low_complexity 1 42 0 449 247 60 13 chr2 56585418 56585568 -194102286 + L1MC5 LINE L1 6960 7116 -845 2851 122 98 42 chr2 56585572 56586072 -194101782 - MER1A DNA MER1_type 0 529 2 293 184 204 48 chr2 56586113 56586216 -194101638 + L1MC5 LINE L1 7163 7281 -680 1860 101 8 0 chr2 56586366 56586614 -194101240 + AluSx SINE Alu 56 305 -7 1262 128 0 0 chr2 56586614 56586793 -194101061 + AluSg/x SINE Alu 132 310 0 21 0 0 0 chr2 56587220 56587241 -194100613 + AT_rich Low_complexity Low_complexity 1 21 0 1171 167 20 159 chr2 56587442 56587795 -194100059 + AluYb8 SINE Alu 2 305 -3 2223 114 3 0 chr2 56588525 56588824 -194099030 + AluSx SINE Alu 1 300 -12 2110 126 3 0 chr2 56589233 56589534 -194098320 + AluSx SINE Alu 1 302 -10 1674 151 17 41 chr2 56589795 56590087 -194097767 + AluJb SINE Alu 2 286 -26 4932 40 5 0 chr2 56590105 56590683 -194097171 - LTR10C LTR ERV1 0 591 11 2161 108 3 3 chr2 56591138 56591433 -194096421 + AluSc SINE Alu 1 295 -14 1306 200 3 57 chr2 56591448 56591763 -194096091 + AluJo SINE Alu 9 306 -6 412 193 210 39 chr2 56592201 56592434 -194095420 + L1MC5 LINE L1 7655 7927 -34 578 170 30 0 chr2 56592652 56592752 -194095102 + L1MC1 LINE L1 6231 6333 0 273 29 0 0 chr2 56593494 56593528 -194094326 + (CA)n Simple_repeat Simple_repeat 2 35 0 1715 116 123 4 chr2 56593654 56593922 -194093932 - AluSx SINE Alu -11 301 2 2213 104 0 26 chr2 56594070 56594379 -194093475 - AluSg SINE Alu -9 301 1 1889 147 7 10 chr2 56594418 56594717 -194093137 + AluSx SINE Alu 11 308 -4 1175 147 0 11 chr2 56594787 56594964 -194092890 + AluSx SINE Alu 1 175 -137 2037 97 31 14 chr2 56595101 56595389 -194092465 - AluSg SINE Alu -1 309 17 1970 97 42 32 chr2 56595778 56596087 -194091767 + AluSx SINE Alu 1 312 0 272 285 57 33 chr2 56596348 56596398 -194091456 - MIR3 SINE MIR -5 203 156 2225 118 0 7 chr2 56596398 56596702 -194091152 + AluSx SINE Alu 1 302 -10 272 285 57 33 chr2 56596702 56596800 -194091054 - MIR3 SINE MIR -52 156 57 21 36 0 0 chr2 56598914 56598942 -194088912 + GC_rich Low_complexity Low_complexity 1 28 0 22 70 0 0 chr2 56599117 56599160 -194088694 + GC_rich Low_complexity Low_complexity 1 43 0 201 154 19 39 chr2 56599203 56599255 -194088599 + (CACCC)n Simple_repeat Simple_repeat 1 51 0 209 157 59 0 chr2 56599481 56599532 -194088322 + (CGG)n Simple_repeat Simple_repeat 2 55 0 206 296 51 41 chr2 56600151 56600249 -194087605 - L2 LINE L2 -230 3042 2944 237 343 103 7 chr2 56600289 56600435 -194087419 - L2 LINE L2 -470 2844 2685 2540 31 7 7 chr2 56600435 56600729 -194087125 + AluSq SINE Alu 1 294 -19 2505 44 0 10 chr2 56600730 56601026 -194086828 + AluY SINE Alu 1 293 -18 333 306 176 34 chr2 56601473 56601746 -194086108 - L2 LINE L2 -1268 2046 1813 1237 157 88 118 chr2 56601746 56602210 -194085644 + LTR7 LTR ERV1 1 450 0 333 306 176 34 chr2 56602210 56602263 -194085591 - L2 LINE L2 -1501 1813 1769 423 0 0 0 chr2 56602263 56602310 -194085544 + (TG)n Simple_repeat Simple_repeat 2 48 0 2099 101 20 29 chr2 56602315 56602621 -194085233 - AluSg SINE Alu -7 303 1 333 306 176 34 chr2 56602621 56602930 -194084924 - L2 LINE L2 -1548 1766 1313 1796 78 0 0 chr2 56603430 56603648 -194084206 + AluSc SINE Alu 79 296 -13 2152 108 14 0 chr2 56603958 56604255 -194083599 + AluY SINE Alu 1 301 -10 1841 171 10 0 chr2 56604621 56604914 -194082940 - AluJo SINE Alu -16 296 1 338 235 162 0 chr2 56605317 56605453 -194082401 - L1MEd LINE L1 -4872 1247 1090 2161 114 7 0 chr2 56605454 56605752 -194082102 - AluY SINE Alu -11 300 1 436 270 80 73 chr2 56605756 56605873 -194081981 - L1MEd LINE L1 -5756 363 248 2293 87 0 7 chr2 56605873 56606159 -194081695 + AluSg SINE Alu 14 297 -13 436 270 80 73 chr2 56606159 56606341 -194081513 - L1MEd LINE L1 -5871 248 62 2377 109 0 0 chr2 56606387 56606689 -194081165 + AluSx SINE Alu 1 302 -10 3877 121 43 47 chr2 56606817 56607011 -194080843 + Tigger3b DNA MER2_type 2 195 -2833 1317 183 3 120 chr2 56607011 56607344 -194080510 + AluSp SINE Alu 1 294 -19 3877 121 43 47 chr2 56607344 56607754 -194080100 + Tigger3b DNA MER2_type 195 605 -2423 2280 111 0 7 chr2 56607754 56608061 -194079793 + AluSc SINE Alu 1 305 -4 3877 121 43 47 chr2 56608061 56608103 -194079751 + Tigger3b DNA MER2_type 605 646 -2382 1955 132 34 0 chr2 56608103 56608399 -194079455 - AluSx SINE Alu -6 306 1 3877 121 43 47 chr2 56608399 56608468 -194079386 + Tigger3b DNA MER2_type 646 716 -515 522 150 0 0 chr2 56608468 56608548 -194079306 + AluJ/FLAM SINE Alu 1 80 -232 223 312 101 46 chr2 56708644 56708854 -193979000 + L2 LINE L2 3034 3258 -14 183 80 0 0 chr2 56708854 56708879 -193978975 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 2087 125 0 10 chr2 56709252 56709555 -193978299 - AluSq SINE Alu -12 301 2 1013 184 0 0 chr2 56709561 56709740 -193978114 - AluJo SINE Alu 0 312 134 216 0 0 0 chr2 56709740 56709764 -193978090 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1724 57 0 0 chr2 56709764 56709973 -193977881 - AluSg/x SINE Alu -30 282 74 2007 77 0 0 chr2 56710073 56710321 -193977533 - AluY SINE Alu -63 248 1 847 126 0 88 chr2 56710321 56710354 -193977500 - AluJo SINE Alu -167 145 111 1710 133 33 11 chr2 56710354 56710625 -193977229 + AluJb SINE Alu 1 277 -35 847 126 0 88 chr2 56710625 56710750 -193977104 - AluJo SINE Alu -201 111 1 213 328 60 0 chr2 56711239 56711306 -193976548 + MER5A DNA MER1_type 70 140 -49 202 267 67 0 chr2 56712131 56712191 -193975663 - MIR SINE MIR -92 170 107 195 355 64 7 chr2 56712242 56712383 -193975471 - L2 LINE L2 -155 3117 2969 1749 125 61 24 chr2 56712735 56712868 -193974986 + AluJo SINE Alu 1 128 -184 2236 87 0 3 chr2 56712868 56713157 -193974697 + AluSq SINE Alu 1 288 -25 1749 125 61 24 chr2 56713157 56713320 -193974534 + AluJo SINE Alu 128 308 -4 342 209 11 131 chr2 56713716 56713907 -193973947 - MLT1B LTR MaLR -36 354 187 1890 163 0 16 chr2 56713908 56714214 -193973640 - AluJo SINE Alu -2 310 10 1025 142 18 6 chr2 56714230 56714399 -193973455 - AluSc SINE Alu -9 300 130 2197 90 10 10 chr2 56714412 56714722 -193973132 - AluSg SINE Alu 0 310 1 2019 122 3 3 chr2 56714722 56715017 -193972837 - AluSx SINE Alu -16 296 1 21 0 0 0 chr2 56716273 56716294 -193971560 + GC_rich Low_complexity Low_complexity 1 21 0 193 178 19 47 chr2 56716769 56716876 -193970978 + G-rich Low_complexity Low_complexity 6 109 0 247 280 20 0 chr2 56717299 56717399 -193970455 + T-rich Low_complexity Low_complexity 2 103 0 27 49 0 0 chr2 56717449 56717490 -193970364 + AT_rich Low_complexity Low_complexity 1 41 0 2517 58 0 6 chr2 56718134 56718446 -193969408 + AluY SINE Alu 2 311 0 406 215 81 47 chr2 56718808 56718957 -193968897 + MLT1C LTR MaLR 1 154 -313 2314 53 0 0 chr2 56718966 56719290 -193968564 - AluY SINE Alu 0 324 1 996 167 11 6 chr2 56719734 56719908 -193967946 + AluJb SINE Alu 136 310 -2 1630 178 0 59 chr2 56720258 56720579 -193967275 - AluJb SINE Alu -10 302 1 264 282 73 9 chr2 56721162 56721272 -193966582 + MIR SINE MIR 37 153 -55 837 167 19 4 chr2 56721400 56721670 -193966184 + (TGGA)n Simple_repeat Simple_repeat 1 274 0 314 157 0 0 chr2 56721674 56721725 -193966129 + (TGGG)n Simple_repeat Simple_repeat 2 52 0 1104 147 0 0 chr2 56721730 56722255 -193965599 + (TGGA)n Simple_repeat Simple_repeat 1 525 0 827 216 0 0 chr2 56722387 56722535 -193965319 - FRAM SINE Alu -34 142 1 406 215 81 47 chr2 56722543 56722692 -193965162 + MLT1C LTR MaLR 1 154 -313 2129 89 4 0 chr2 56722701 56723024 -193964830 - AluY SINE Alu 0 324 1 554 165 0 11 chr2 56723469 56723560 -193964294 + AluJb SINE Alu 136 225 -87 939 180 4 0 chr2 56723963 56724438 -193963416 + (TGGA)n Simple_repeat Simple_repeat 1 477 0 428 247 44 76 chr2 56724915 56725073 -193962781 + MER3 DNA MER1_type 1 153 -56 2046 106 0 3 chr2 56725073 56725387 -193962467 - AluSx SINE Alu 0 313 1 2068 144 0 3 chr2 56725387 56725699 -193962155 - AluSx SINE Alu -1 311 1 2123 49 0 4 chr2 56725724 56725988 -193961866 + AluY SINE Alu 1 263 -48 1502 168 31 9 chr2 56726109 56726430 -193961424 + THE1C LTR MaLR 7 334 -41 2058 71 61 3 chr2 56726431 56726725 -193961129 + AluY SINE Alu 1 311 0 255 29 0 0 chr2 56726748 56726782 -193961072 + L1PA6 LINE L1 6111 6144 -10 25 31 0 0 chr2 56726782 56726814 -193961040 + AT_rich Low_complexity Low_complexity 1 32 0 321 200 13 27 chr2 56726824 56726899 -193960955 - AluJ/FLAM SINE Alu -227 75 2 1802 120 58 0 chr2 56727075 56727351 -193960503 + AluSp SINE Alu 1 292 -21 198 298 24 36 chr2 56727624 56727708 -193960146 + L2 LINE L2 3221 3303 -10 2304 95 0 0 chr2 56727710 56728016 -193959838 + AluSq SINE Alu 1 306 -7 2367 91 0 0 chr2 56728191 56728500 -193959354 - AluSx SINE Alu -1 311 3 2530 43 3 0 chr2 56728507 56728809 -193959045 - AluY SINE Alu -8 303 1 21 57 0 0 chr2 56728812 56728847 -193959007 + AT_rich Low_complexity Low_complexity 1 35 0 557 168 0 92 chr2 56728869 56728988 -193958866 + FRAM SINE Alu 48 155 -21 1888 110 3 35 chr2 56728997 56729323 -193958531 + AluSx SINE Alu 1 317 0 1836 108 39 11 chr2 56729324 56729603 -193958251 + AluSq SINE Alu 4 290 -23 612 199 301 25 chr2 56729617 56729853 -193958001 - L1MD2 LINE L1 -150 6209 6040 1492 206 0 20 chr2 56729853 56730015 -193957839 - AluJo SINE Alu -17 295 131 270 0 0 0 chr2 56730015 56730045 -193957809 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2321 42 0 3 chr2 56730045 56730328 -193957526 - AluY SINE Alu -29 282 1 1492 206 0 20 chr2 56730328 56730465 -193957389 - AluJo SINE Alu -179 133 1 2234 95 0 0 chr2 56730467 56730771 -193957083 - AluSg SINE Alu -6 304 1 612 199 301 25 chr2 56730771 56730813 -193957041 - L1MD2 LINE L1 -319 6040 5850 183 280 20 0 chr2 56730889 56730939 -193956915 + MIR SINE MIR 115 165 -97 1900 119 14 10 chr2 56731176 56731469 -193956385 + AluSq SINE Alu 1 294 -19 266 123 27 41 chr2 56731537 56731610 -193956244 + GA-rich Low_complexity Low_complexity 3 74 0 699 215 23 0 chr2 56732134 56732264 -193955590 + AluJo/FLAM SINE Alu 1 133 -169 2209 92 26 0 chr2 56732266 56732593 -193955261 + AluSx SINE Alu 1 335 0 2112 107 0 26 chr2 56732631 56732940 -193954914 - AluSx SINE Alu -11 301 1 2236 115 0 0 chr2 56733510 56733822 -193954032 + AluSx SINE Alu 1 312 0 2244 125 0 0 chr2 56733828 56734139 -193953715 + AluSx SINE Alu 1 311 -1 2243 107 3 0 chr2 56734164 56734473 -193953381 + AluSg SINE Alu 1 310 0 189 0 0 0 chr2 56734805 56734826 -193953028 + (T)n Simple_repeat Simple_repeat 1 21 0 652 244 58 56 chr2 56734901 56735115 -193952739 - MER20 DNA MER1_type -1 218 2 2251 104 0 0 chr2 56735119 56735426 -193952428 - AluSc SINE Alu -2 307 1 2024 60 12 0 chr2 56735456 56735706 -193952148 + AluY SINE Alu 1 253 -58 1799 118 86 0 chr2 56735744 56736024 -193951830 - AluSq SINE Alu -9 304 1 1562 185 14 20 chr2 56736026 56736318 -193951536 - AluJo SINE Alu -11 301 12 232 267 267 30 chr2 56736369 56736504 -193951350 - MIR3 SINE MIR -6 202 36 2149 97 0 39 chr2 56736624 56736742 -193951112 + AluSx SINE Alu 1 122 -190 2386 56 0 13 chr2 56736742 56737047 -193950807 + AluY SINE Alu 1 301 -10 2149 97 0 39 chr2 56737047 56737237 -193950617 + AluSx SINE Alu 122 297 -15 2331 85 3 3 chr2 56737413 56737719 -193950135 - AluSq SINE Alu -7 306 1 1916 124 28 3 chr2 56737950 56738232 -193949622 - AluJb SINE Alu -17 295 7 207 325 26 0 chr2 56738924 56739001 -193948853 - MIR3 SINE MIR -52 156 78 2386 39 0 39 chr2 56739009 56739315 -193948539 - AluY SINE Alu -17 294 1 2199 104 0 0 chr2 56739315 56739612 -193948242 - AluSg SINE Alu -13 297 1 1706 85 135 0 chr2 56740448 56740708 -193947146 + AluSp SINE Alu 1 295 -18 802 215 0 7 chr2 56740708 56740857 -193946997 - AluJb SINE Alu -34 278 131 1251 35 0 0 chr2 56740873 56741017 -193946837 + AluY SINE Alu 1 144 -167 2342 84 3 0 chr2 56741017 56741325 -193946529 + AluSx SINE Alu 1 309 -3 1087 194 14 5 chr2 56741364 56741575 -193946279 - AluJo SINE Alu -94 218 6 671 151 28 0 chr2 56741577 56741683 -193946171 - AluJo SINE Alu -174 138 30 253 280 11 75 chr2 56741810 56741903 -193945951 + L2 LINE L2 3226 3312 -1 189 161 0 0 chr2 56742140 56742171 -193945683 + MIR SINE MIR 221 251 -11 2171 96 0 0 chr2 56742397 56742710 -193945144 - AluSc SINE Alu 0 313 1 1124 149 41 0 chr2 56742721 56742916 -193944938 - AluJb SINE Alu -3 309 107 2533 55 3 0 chr2 56742921 56743231 -193944623 + AluY SINE Alu 1 311 0 2099 108 3 25 chr2 56743239 56743555 -193944299 + AluSx SINE Alu 3 311 -1 426 231 16 65 chr2 56745059 56745245 -193942609 + (CGGG)n Simple_repeat Simple_repeat 4 180 0 * 630 173 0 58 chr2 56745182 56745373 -193942481 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 2052 137 0 0 chr2 56746219 56746519 -193941335 - AluJb SINE Alu -12 300 1 451 247 49 6 chr2 56748817 56749144 -193938710 + (CA)n Simple_repeat Simple_repeat 1 341 0 299 44 22 0 chr2 56749193 56749238 -193938616 + (CA)n Simple_repeat Simple_repeat 2 47 0 22 0 0 0 chr2 56749673 56749695 -193938159 + GC_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 56749795 56749831 -193938023 + GC_rich Low_complexity Low_complexity 1 36 0 269 351 70 18 chr2 56750635 56750806 -193937048 - MIR SINE MIR -78 184 5 2092 120 3 31 chr2 56751191 56751508 -193936346 - AluSx SINE Alu -4 308 1 182 337 157 0 chr2 56751551 56751634 -193936220 - L2 LINE L2 -14 3258 3163 379 286 43 7 chr2 56751751 56751891 -193935963 - MIR SINE MIR -96 166 22 835 166 29 17 chr2 56752347 56752522 -193935332 + L1MB5 LINE L1 5998 6174 0 1000 118 0 0 chr2 56752542 56752678 -193935176 + AluSq/x SINE Alu 1 136 -177 2463 54 7 0 chr2 56752680 56752978 -193934876 + AluY SINE Alu 4 303 -8 248 163 18 11 chr2 56753000 56753055 -193934799 - MIR SINE MIR -43 165 113 1846 131 3 26 chr2 56753779 56754085 -193933769 + AluJo SINE Alu 14 312 0 2411 71 0 0 chr2 56754087 56754397 -193933457 + AluY SINE Alu 1 310 -1 226 281 128 56 chr2 56754403 56754456 -193933398 + L2 LINE L2 1999 2047 -1267 2201 113 3 0 chr2 56754456 56754758 -193933096 - AluSp SINE Alu -10 303 1 226 281 128 56 chr2 56754758 56754900 -193932954 + L2 LINE L2 2047 2208 -1106 241 246 16 0 chr2 56754944 56755005 -193932849 - LTR16C LTR ERVL -7 484 423 438 323 56 50 chr2 56755139 56755442 -193932412 + L2 LINE L2 2882 3186 -86 303 199 41 178 chr2 56755623 56755697 -193932157 + L1MC3 LINE L1 7512 7558 -227 2324 97 0 0 chr2 56755697 56756005 -193931849 + AluY SINE Alu 1 308 -3 303 199 41 178 chr2 56756005 56756076 -193931778 + L1MC3 LINE L1 7558 7637 -148 29 28 0 0 chr2 56756126 56756162 -193931692 + AT_rich Low_complexity Low_complexity 1 36 0 1831 170 6 6 chr2 56756162 56756474 -193931380 + AluJb SINE Alu 1 312 0 801 143 0 36 chr2 56756562 56756702 -193931152 + AluJb SINE Alu 1 135 -177 1877 159 0 22 chr2 56756702 56757017 -193930837 + AluJo SINE Alu 1 308 -4 653 271 36 9 chr2 56757157 56757382 -193930472 - MLT1K LTR MaLR -282 306 76 976 129 20 0 chr2 56757764 56757911 -193929943 - AluSq/x SINE Alu -163 150 1 630 231 94 30 chr2 56757912 56758115 -193929739 - L1MA10 LINE L1 -56 6278 6063 2220 100 3 0 chr2 56759055 56759365 -193928489 - AluSx SINE Alu -1 311 1 22 35 0 0 chr2 56760214 56760243 -193927611 + GC_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 56760566 56760588 -193927266 + GC_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr2 56760684 56760723 -193927131 + GC_rich Low_complexity Low_complexity 1 39 0 2163 111 3 0 chr2 56761133 56761440 -193926414 - AluSx SINE Alu -4 308 1 341 289 0 21 chr2 56762133 56762230 -193925624 - MIR3 SINE MIR -52 156 62 1961 126 18 0 chr2 56762366 56762652 -193925202 + AluSx SINE Alu 1 291 -21 485 241 62 2 chr2 56762748 56762913 -193924941 - MIR SINE MIR -62 146 5 479 94 0 42 chr2 56764131 56764227 -193923627 + (TTCC)n Simple_repeat Simple_repeat 1 92 0 183 279 82 0 chr2 56764406 56764467 -193923387 - MIR3 SINE MIR -43 165 100 2142 106 0 31 chr2 56764554 56764876 -193922978 - AluSx SINE Alu 0 312 1 211 301 55 0 chr2 56764913 56764986 -193922868 + L2 LINE L2 3235 3311 -2 252 0 0 0 chr2 56765031 56765059 -193922795 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 239 282 128 0 chr2 56765096 56765174 -193922680 + MIR SINE MIR 36 123 -85 241 310 38 19 chr2 56765412 56765570 -193922284 + C-rich Low_complexity Low_complexity 1 161 0 200 307 11 45 chr2 56766048 56766136 -193921718 - MIR SINE MIR 0 262 178 180 244 24 0 chr2 56766332 56766373 -193921481 - MIR SINE MIR -113 149 108 1752 181 0 0 chr2 56768456 56768744 -193919110 - AluJo SINE Alu -15 297 10 2764 81 11 0 chr2 56768805 56769163 -193918691 - L1PA8 LINE L1 -13 6159 5798 184 260 201 19 chr2 56769791 56769945 -193917909 + MIR3 SINE MIR 9 190 -18 190 319 0 0 chr2 56769995 56770042 -193917812 - L2 LINE L2 -3 3310 3264 1515 194 3 25 chr2 56770801 56771120 -193916734 - AluJo SINE Alu 0 312 1 2209 106 6 0 chr2 56771136 56771447 -193916407 - AluSq SINE Alu 0 313 1 839 211 0 57 chr2 56771472 56771634 -193916220 + AluJb SINE Alu 137 307 -5 2177 91 10 7 chr2 56771634 56771943 -193915911 + AluSg SINE Alu 1 310 0 2267 105 0 10 chr2 56771944 56772258 -193915596 + AluSx SINE Alu 1 311 -1 2202 107 3 0 chr2 56772619 56772917 -193914937 + AluSp SINE Alu 1 299 -14 388 224 13 20 chr2 56772969 56773121 -193914733 + L2 LINE L2 2817 2967 -346 2202 103 3 3 chr2 56773121 56773421 -193914433 - AluSc SINE Alu -9 300 1 2029 132 0 7 chr2 56773421 56773724 -193914130 - AluSx SINE Alu -11 301 1 6761 55 4 47 chr2 56773756 56775220 -193912634 + SVA Other Other 213 1380 -6 2147 120 3 0 chr2 56775332 56775632 -193912222 - AluSx SINE Alu -7 305 5 259 270 95 48 chr2 56775694 56775820 -193912034 + MIR3 SINE MIR 15 146 -62 237 270 0 0 chr2 56776878 56776967 -193910887 + (CA)n Simple_repeat Simple_repeat 1 89 0 194 203 0 17 chr2 56777079 56777138 -193910716 + (CA)n Simple_repeat Simple_repeat 1 58 0 2188 77 28 0 chr2 56778855 56779140 -193908714 + AluY SINE Alu 1 293 -18 781 197 39 116 chr2 56779310 56779543 -193908311 - MER20 DNA MER1_type 0 219 5 233 250 18 0 chr2 56779655 56779711 -193908143 + MIR SINE MIR 117 173 -89 2047 96 39 0 chr2 56779743 56780025 -193907829 - AluSx SINE Alu -11 301 9 216 0 0 0 chr2 56780106 56780130 -193907724 + (TG)n Simple_repeat Simple_repeat 2 25 0 202 189 0 0 chr2 56780185 56780222 -193907632 - L2 LINE L2 -19 3294 3258 870 153 0 0 chr2 56781268 56781392 -193906462 + FLAM_C SINE Alu 1 124 -9 2078 99 0 40 chr2 56781412 56781714 -193906140 + AluSx SINE Alu 1 290 -22 22 56 0 0 chr2 56782671 56782707 -193905147 + GC_rich Low_complexity Low_complexity 1 36 0 2377 56 0 10 chr2 56784405 56784708 -193903146 + AluY SINE Alu 1 300 -11 2249 118 0 0 chr2 56784958 56785263 -193902591 + AluSx SINE Alu 1 305 -7 200 216 59 0 chr2 56786439 56786490 -193901364 + (GGGTG)n Simple_repeat Simple_repeat 3 56 0 1041 91 0 0 chr2 56787107 56787239 -193900615 + AluY SINE Alu 1 132 -179 2369 49 0 0 chr2 56787243 56787527 -193900327 + AluY SINE Alu 1 284 -27 207 0 0 0 chr2 56787527 56787550 -193900304 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 2040 116 0 14 chr2 56787562 56787877 -193899977 + AluSx SINE Alu 1 311 0 271 122 0 0 chr2 56787902 56787943 -193899911 + AluJ/FLAM SINE Alu 35 75 -227 2379 82 0 0 chr2 56787944 56788248 -193899606 - AluY SINE Alu -6 305 2 1649 147 10 42 chr2 56788250 56788557 -193899297 - AluSx SINE Alu -15 297 1 407 21 0 0 chr2 56788561 56788608 -193899246 - AluSq/x SINE Alu -180 133 87 2061 114 0 20 chr2 56788672 56788969 -193898885 - AluJb SINE Alu -14 298 8 2022 103 31 10 chr2 56789011 56789303 -193898551 - AluSq SINE Alu -15 298 1 1966 117 3 20 chr2 56789334 56789633 -193898221 - AluSx SINE Alu -18 294 1 189 0 0 0 chr2 56789871 56789892 -193897962 + (CCCCCG)n Simple_repeat Simple_repeat 2 22 0 30 45 0 0 chr2 56790003 56790047 -193897807 + GC_rich Low_complexity Low_complexity 1 44 0 261 192 39 0 chr2 56790247 56790299 -193897555 + MIR3 SINE MIR 117 170 -38 955 194 6 0 chr2 56792654 56792819 -193895035 - FRAM SINE Alu 0 166 1 403 104 52 0 chr2 56792822 56792899 -193894955 + CT-rich Low_complexity Low_complexity 4 84 0 984 57 8 0 chr2 56792899 56793021 -193894833 - AluSc SINE Alu -186 123 1 363 340 93 5 chr2 56793022 56793309 -193894545 - HAL1 LINE L1 -1205 1302 880 2271 76 0 33 chr2 56793321 56793623 -193894231 - AluY SINE Alu -19 292 1 1080 53 23 0 chr2 56793623 56793754 -193894100 - AluSq/x SINE Alu -176 136 3 225 113 14 169 chr2 56793755 56793784 -193894070 + L1MB7 LINE L1 6111 6124 -60 2167 99 3 16 chr2 56793784 56794097 -193893757 + AluSx SINE Alu 1 309 -3 225 113 14 169 chr2 56794097 56794138 -193893716 + L1MB7 LINE L1 6124 6170 -14 1618 110 27 104 chr2 56795265 56795593 -193892261 + AluYb8 SINE Alu 1 303 -15 243 241 17 0 chr2 56795596 56795654 -193892200 + FLAM_A SINE Alu 2 60 -72 2044 109 11 0 chr2 56795700 56795984 -193891870 + AluSx SINE Alu 1 287 -25 27 29 0 0 chr2 56795984 56796018 -193891836 + AT_rich Low_complexity Low_complexity 1 34 0 788 243 92 0 chr2 56796024 56796275 -193891579 + MER58 DNA MER1_type 1 274 -67 360 300 83 22 chr2 56796388 56796537 -193891317 - L2 LINE L2 0 3313 3150 2345 99 0 6 chr2 56796537 56796849 -193891005 + AluSx SINE Alu 1 310 -2 360 300 83 22 chr2 56796849 56796879 -193890975 - L2 LINE L2 -163 3150 3123 1579 156 109 0 chr2 56796923 56797198 -193890656 + AluJo SINE Alu 1 305 -7 252 346 28 0 chr2 56797217 56797324 -193890530 - MER3 DNA MER1_type -99 110 1 1960 123 3 26 chr2 56798129 56798439 -193889415 - AluJb SINE Alu -9 303 1 26 0 0 0 chr2 56803873 56803899 -193883955 + GC_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr2 56803985 56804010 -193883844 + GC_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 56804257 56804280 -193883574 + GC_rich Low_complexity Low_complexity 1 23 0 246 147 0 53 chr2 56804314 56804389 -193883465 + (CCGGG)n Simple_repeat Simple_repeat 5 75 0 28 61 0 0 chr2 56804431 56804480 -193883374 + GC_rich Low_complexity Low_complexity 1 49 0 38 51 0 0 chr2 56804629 56804688 -193883166 + GC_rich Low_complexity Low_complexity 1 59 0 29 0 0 0 chr2 56806600 56806629 -193881225 + GC_rich Low_complexity Low_complexity 1 29 0 248 267 107 8 chr2 56808751 56808882 -193878972 + MER53 DNA DNA 6 149 -40 2061 127 3 0 chr2 56808906 56809214 -193878640 + AluSx SINE Alu 1 309 -3 910 208 0 0 chr2 56809275 56809448 -193878406 - AluJo SINE Alu -22 290 118 25 31 0 0 chr2 56809464 56809496 -193878358 + AT_rich Low_complexity Low_complexity 1 32 0 2192 110 0 0 chr2 56809501 56809802 -193878052 - AluSq SINE Alu -2 311 11 1188 57 0 0 chr2 56809805 56809946 -193877908 - AluSq/x SINE Alu -171 141 1 31 0 0 0 chr2 56809993 56810024 -193877830 + AT_rich Low_complexity Low_complexity 1 31 0 831 195 20 7 chr2 56810086 56810235 -193877619 - AluJb SINE Alu -28 284 134 2023 107 6 44 chr2 56810235 56810405 -193877449 - AluSp SINE Alu -8 305 151 2064 99 17 3 chr2 56810405 56810699 -193877155 - AluY SINE Alu -13 298 1 2023 107 6 44 chr2 56810699 56810845 -193877009 - AluSp SINE Alu -162 151 1 2393 67 0 3 chr2 56810853 56811150 -193876704 - AluY SINE Alu -15 296 1 2395 88 3 0 chr2 56811157 56811465 -193876389 - AluSp SINE Alu -4 309 1 2442 65 0 0 chr2 56811960 56812268 -193875586 - AluY SINE Alu -3 308 1 1384 107 102 0 chr2 56812276 56812491 -193875363 - AluSx SINE Alu -20 292 56 296 235 30 0 chr2 56813361 56813451 -193874403 + MIR SINE MIR 102 194 -62 258 268 10 20 chr2 56813859 56813973 -193873881 + L2 LINE L2 2866 2978 -294 294 366 8 0 chr2 56814322 56814456 -193873398 + L1MB3 LINE L1 5687 5821 -350 962 128 0 43 chr2 56814464 56814628 -193873226 + AluSg/x SINE Alu 132 288 -22 725 234 62 14 chr2 56814644 56814853 -193873001 + L1MB3 LINE L1 5835 6053 -130 1818 97 128 0 chr2 56814855 56815112 -193872742 + AluSx SINE Alu 1 290 -12 1459 141 114 4 chr2 56815125 56815388 -193872466 - AluJo SINE Alu -20 292 1 874 192 0 0 chr2 56816141 56816287 -193871567 - FRAM SINE Alu -30 146 1 198 310 52 0 chr2 56816366 56816424 -193871430 - L2 LINE L2 0 3313 3253 25 65 0 0 chr2 56816782 56816828 -193871026 + GC_rich Low_complexity Low_complexity 1 46 0 223 333 13 27 chr2 56817800 56817950 -193869904 + C-rich Low_complexity Low_complexity 2 149 0 1255 107 0 158 chr2 56818896 56818972 -193868882 + AluJo SINE Alu 81 167 -145 2534 48 0 13 chr2 56818972 56819285 -193868569 + AluY SINE Alu 1 309 -2 1255 107 0 158 chr2 56819285 56819480 -193868374 + AluJo SINE Alu 167 309 -3 188 348 56 0 chr2 56819627 56819716 -193868138 - MIR SINE MIR -89 173 80 301 240 108 23 chr2 56822724 56822853 -193865001 + L2 LINE L2 2632 2771 -543 203 269 218 45 chr2 56822897 56823053 -193864801 + L2 LINE L2 2912 3094 -178 311 315 18 9 chr2 56823133 56823244 -193864610 - MIR3 SINE MIR -13 195 84 28 71 0 0 chr2 56823806 56823862 -193863992 + GC_rich Low_complexity Low_complexity 1 56 0 254 164 30 45 chr2 56824313 56824380 -193863474 + (TCTCTG)n Simple_repeat Simple_repeat 1 66 0 255 204 37 0 chr2 56824629 56824683 -193863171 + MIR SINE MIR 94 149 -59 2527 36 10 7 chr2 56824966 56825275 -193862579 - AluY SINE Alu -1 310 1 1749 112 4 0 chr2 56825275 56825525 -193862329 - AluSg SINE Alu -12 298 48 265 318 84 13 chr2 56825694 56825848 -193862006 + MIR3 SINE MIR 3 167 -41 220 319 44 11 chr2 56825922 56826013 -193861841 - MIR3 SINE MIR -29 179 86 23 0 0 0 chr2 56827397 56827420 -193860434 + GC_rich Low_complexity Low_complexity 1 23 0 30 45 0 0 chr2 56827554 56827598 -193860256 + GC_rich Low_complexity Low_complexity 1 44 0 283 237 237 0 chr2 56828167 56828260 -193859594 - L2 LINE L2 -3 3310 3196 2190 94 16 3 chr2 56829051 56829358 -193858496 + AluSx SINE Alu 1 311 -1 2463 45 0 13 chr2 56829945 56830253 -193857601 - AluY SINE Alu -7 304 1 287 40 80 0 chr2 56830441 56830491 -193857363 - AluY SINE Alu 0 300 247 1962 105 0 0 chr2 56830493 56830759 -193857095 + AluSx SINE Alu 32 297 -15 1338 202 83 50 chr2 56830942 56831338 -193856516 - LTR2 LTR ERV1 0 449 41 1781 115 84 24 chr2 56831879 56832166 -193855688 - AluSq SINE Alu -9 304 1 626 262 98 6 chr2 56832179 56832343 -193855511 + AluJo SINE Alu 123 301 -11 828 153 8 0 chr2 56834148 56834279 -193853575 + AluJo SINE Alu 5 136 -176 2018 115 13 0 chr2 56834280 56834585 -193853269 + AluSx SINE Alu 1 309 -3 202 187 0 80 chr2 56834867 56834942 -193852912 + C-rich Low_complexity Low_complexity 4 72 0 189 326 23 0 chr2 56835626 56835721 -193852133 + MIR SINE MIR 83 137 -71 * 203 152 0 0 chr2 56835702 56835735 -193852119 - L2 LINE L2 -10 3303 3271 859 162 54 73 chr2 56835876 56836080 -193851774 + AluJb SINE Alu 92 291 -21 2288 73 3 17 chr2 56836175 56836476 -193851378 - AluSq SINE Alu -16 297 1 2176 84 47 3 chr2 56836552 56836851 -193851003 + AluSx SINE Alu 1 312 0 2584 49 0 0 chr2 56837463 56837770 -193850084 - AluSp SINE Alu -6 307 1 439 135 151 4 chr2 56837800 56837906 -193849948 + MLT1D LTR MaLR 8 130 -375 23 0 0 0 chr2 56838986 56839009 -193848845 + GC_rich Low_complexity Low_complexity 1 23 0 1657 107 4 0 chr2 56842174 56842408 -193845446 + AluSq SINE Alu 65 299 -14 2377 70 0 16 chr2 56842412 56842726 -193845128 + AluY SINE Alu 3 311 0 2419 63 0 3 chr2 56842818 56843119 -193844735 + AluY SINE Alu 1 300 -11 201 140 53 35 chr2 56847581 56847638 -193840216 + (CCCCAG)n Simple_repeat Simple_repeat 3 60 0 240 111 0 0 chr2 56849460 56849496 -193838358 + (GGA)n Simple_repeat Simple_repeat 3 38 0 282 160 0 0 chr2 56850937 56850987 -193836867 + A-rich Low_complexity Low_complexity 1 50 0 311 360 89 21 chr2 56854120 56854356 -193833498 + L1MC4 LINE L1 7611 7862 -180 25 0 0 0 chr2 56855226 56855251 -193832603 + GC_rich Low_complexity Low_complexity 1 25 0 333 0 0 0 chr2 56858411 56858448 -193829406 + (CA)n Simple_repeat Simple_repeat 2 38 0 941 148 139 1 chr2 56858739 56858985 -193828869 + AluJ SINE Alu 2 311 -1 37 52 0 0 chr2 56858990 56859048 -193828806 + AT_rich Low_complexity Low_complexity 1 58 0 2107 71 32 4 chr2 56859057 56859337 -193828517 - AluSc SINE Alu -21 288 1 356 244 58 113 chr2 56859339 56859488 -193828366 + L1MC4 LINE L1 7770 7926 -116 1976 111 0 7 chr2 56859488 56859767 -193828087 + AluSx SINE Alu 5 281 -31 387 0 0 0 chr2 56859769 56859812 -193828042 + (CA)n Simple_repeat Simple_repeat 2 44 0 356 244 58 113 chr2 56859812 56859934 -193827920 + L1MC4 LINE L1 7927 8029 -13 538 100 0 11 chr2 56860057 56860147 -193827707 - AluS SINE Alu -224 89 1 195 370 59 8 chr2 56861992 56862111 -193825743 + MIR3 SINE MIR 30 154 -54 432 248 60 8 chr2 56862404 56862521 -193825333 + MER20 DNA MER1_type 29 151 -68 21 0 0 0 chr2 56865721 56865742 -193822112 + GC_rich Low_complexity Low_complexity 1 21 0 32 75 0 0 chr2 56865903 56865970 -193821884 + GC_rich Low_complexity Low_complexity 1 67 0 387 0 0 0 chr2 56866139 56866182 -193821672 + (CGG)n Simple_repeat Simple_repeat 1 43 0 31 58 0 0 chr2 56866210 56866262 -193821592 + GC_rich Low_complexity Low_complexity 1 52 0 199 100 80 0 chr2 56866469 56866519 -193821335 + (CGTG)n Simple_repeat Simple_repeat 3 56 0 350 277 50 0 chr2 56866704 56866805 -193821049 - MIR SINE MIR -114 148 43 915 214 28 23 chr2 56866911 56867126 -193820728 + MER20 DNA MER1_type 1 216 -3 1878 106 24 27 chr2 56867280 56867573 -193820281 + AluSx SINE Alu 1 292 -20 2251 104 0 0 chr2 56867574 56867881 -193819973 + AluY SINE Alu 1 307 -4 969 129 0 0 chr2 56867905 56868045 -193819809 - FRAM SINE Alu -12 164 25 1788 151 20 0 chr2 56868067 56868190 -193819664 + AluJo SINE Alu 1 120 -192 198 0 0 0 chr2 56868190 56868212 -193819642 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1788 151 20 0 chr2 56868212 56868380 -193819474 + AluJo SINE Alu 120 298 -14 875 145 0 0 chr2 56868381 56868512 -193819342 + AluSx SINE Alu 3 133 -179 22 0 0 0 chr2 56868643 56868665 -193819189 + AT_rich Low_complexity Low_complexity 1 22 0 2346 81 0 0 chr2 56868667 56868965 -193818889 + AluSx SINE Alu 1 298 -14 1202 125 0 0 chr2 56868965 56869141 -193818713 + AluSx SINE Alu 137 312 0 1649 151 21 66 chr2 56869321 56869372 -193818482 - L1MB3 LINE L1 -1 6182 6130 2283 75 23 0 chr2 56869372 56869677 -193818177 - AluSp SINE Alu -1 312 1 1649 151 21 66 chr2 56869677 56869957 -193817897 - L1MB3 LINE L1 -53 6130 5866 1515 61 80 0 chr2 56869957 56870170 -193817684 - AluSq SINE Alu -83 230 1 676 208 8 0 chr2 56870188 56870313 -193817541 - FLAM_C SINE Alu -12 131 6 1990 107 0 60 chr2 56870479 56870797 -193817057 + AluY SINE Alu 5 303 -8 302 208 198 10 chr2 56871065 56871166 -193816688 + MIR SINE MIR 41 160 -102 261 0 0 0 chr2 56871187 56871216 -193816638 + (CAGG)n Simple_repeat Simple_repeat 3 31 0 233 171 0 0 chr2 56871594 56871635 -193816219 + MIR SINE MIR 104 144 -64 256 38 208 0 chr2 56871640 56871693 -193816161 + MER41A LTR ERV1 400 463 -91 213 39 0 0 chr2 56871696 56871722 -193816132 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 240 268 10 41 chr2 56871722 56871747 -193816107 + MIR SINE MIR 138 162 -100 1001 76 0 15 chr2 56871747 56871878 -193815976 + FLAM_C SINE Alu 4 132 -1 240 268 10 41 chr2 56871878 56871949 -193815905 + MIR SINE MIR 162 231 -31 22 35 0 0 chr2 56872374 56872403 -193815451 + GC_rich Low_complexity Low_complexity 1 29 0 1719 148 0 43 chr2 56875059 56875395 -193812459 + AluJo SINE Alu 2 312 0 2126 132 0 0 chr2 56875404 56875708 -193812146 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr2 56878293 56878313 -193809541 + (CGG)n Simple_repeat Simple_repeat 1 20 0 362 254 7 43 chr2 56879880 56880018 -193807836 + MER53 DNA DNA 26 158 -31 1176 245 92 0 chr2 56881120 56881447 -193806407 + L1MB7 LINE L1 5778 6134 -50 990 197 25 5 chr2 56881448 56881651 -193806203 + AluJo SINE Alu 96 302 -10 2148 115 0 0 chr2 56881655 56881951 -193805903 + AluSg SINE Alu 1 296 -14 2351 82 13 3 chr2 56882019 56882324 -193805530 + AluSx SINE Alu 1 308 -4 291 270 0 50 chr2 56883114 56883214 -193804640 - Charlie5 DNA MER1_type -85 2527 2433 2353 49 29 19 chr2 56883602 56883910 -193803944 + AluY SINE Alu 1 311 0 459 274 0 0 chr2 56884457 56884632 -193803222 + (TG)n Simple_repeat Simple_repeat 1 175 0 266 319 11 11 chr2 56884635 56884729 -193803125 + (CGTG)n Simple_repeat Simple_repeat 4 97 0 215 241 12 0 chr2 56884732 56884815 -193803039 + (TG)n Simple_repeat Simple_repeat 1 84 0 193 324 48 19 chr2 56886300 56886405 -193801449 + L2 LINE L2 2921 3028 -244 1510 159 53 58 chr2 56886902 56887007 -193800847 + MLT1B LTR MaLR 8 112 -278 2223 105 0 0 chr2 56887007 56887302 -193800552 + AluSx SINE Alu 3 297 -15 1510 159 53 58 chr2 56887302 56887555 -193800299 + MLT1B LTR MaLR 112 364 -26 2143 88 3 3 chr2 56887956 56888265 -193799589 - AluSp SINE Alu 0 309 1 2264 81 7 0 chr2 56888267 56888563 -193799291 - AluSp SINE Alu -9 304 7 1325 246 42 57 chr2 56888569 56888698 -193799156 + Charlie4a DNA MER1_type 1 131 -1830 1555 172 41 14 chr2 56888698 56888989 -193798865 + AluJb SINE Alu 1 299 -13 1325 246 42 57 chr2 56888989 56889364 -193798490 + Charlie4a DNA MER1_type 131 497 -11 689 0 0 0 chr2 56890164 56890239 -193797615 - tRNA-Asn-AAC tRNA tRNA -2 75 1 686 0 0 0 chr2 56890367 56890440 -193797414 + tRNA-Phe-TTC tRNA tRNA 1 73 -3 1737 89 171 8 chr2 56890859 56891117 -193796737 + AluSg SINE Alu 1 300 0 200 292 0 15 chr2 56891223 56891288 -193796566 - L2 LINE L2 -51 3221 3158 850 150 0 0 chr2 56891301 56891428 -193796426 + FLAM_C SINE Alu 1 127 -16 2052 117 23 0 chr2 56891539 56891839 -193796015 - AluSx SINE Alu -5 307 1 656 265 167 15 chr2 56891846 56892182 -193795672 - L1MC3 LINE L1 -29 7756 7370 2199 114 0 0 chr2 56892443 56892741 -193795113 - AluSx SINE Alu -14 298 1 399 263 115 6 chr2 56892857 56893013 -193794841 + MLT1B LTR MaLR 363 535 -32 1473 164 94 0 chr2 56893320 56893577 -193794277 + AluJb SINE Alu 1 287 -25 246 32 0 0 chr2 56893577 56893608 -193794246 + (CCAA)n Simple_repeat Simple_repeat 2 32 0 1473 164 94 0 chr2 56893608 56893625 -193794229 + AluJb SINE Alu 287 301 -11 558 188 39 47 chr2 56894770 56894898 -193792956 - AluJb SINE Alu -33 279 153 2029 98 25 0 chr2 56894924 56895210 -193792644 - AluSx SINE Alu -19 293 1 462 83 0 0 chr2 56897350 56897410 -193790444 + Alu SINE Alu 3 62 -249 1358 116 0 112 chr2 56947410 56947669 -193740185 + AluY SINE Alu 75 304 -7 2023 109 10 26 chr2 56947683 56947987 -193739867 + AluSg SINE Alu 3 301 -9 355 294 49 72 chr2 56948005 56948394 -193739460 + L1MC4 LINE L1 1869 6983 -1339 552 255 35 0 chr2 56948405 56948550 -193739304 + L1MB3 LINE L1 6014 6163 -20 2062 101 7 20 chr2 56948553 56948851 -193739003 - AluSc SINE Alu -15 294 1 856 226 0 0 chr2 56948873 56949032 -193738822 - FRAM SINE Alu -20 156 1 2182 105 0 26 chr2 56951007 56951313 -193736541 - AluSg SINE Alu -12 298 1 768 249 58 0 chr2 56951446 56951651 -193736203 - MER20 DNA MER1_type 0 219 3 2358 70 10 0 chr2 56951686 56951984 -193735870 + AluY SINE Alu 1 301 -10 314 304 22 11 chr2 56952009 56952101 -193735753 + L1MC5 LINE L1 7837 7929 -32 233 204 19 0 chr2 56952285 56952339 -193735515 + Tigger5 DNA MER2_type 2237 2291 -32 263 265 48 0 chr2 56952339 56952422 -193735432 + Tigger5 DNA MER2_type 2237 2323 0 1736 148 3 24 chr2 56953544 56953842 -193734012 - AluJo SINE Alu -20 292 1 2301 91 0 0 chr2 56955567 56955864 -193731990 + AluSg SINE Alu 1 297 -13 263 328 69 26 chr2 56956270 56956386 -193731468 + MIR SINE MIR 65 185 -77 2268 109 0 3 chr2 56958642 56958953 -193728901 - AluSx SINE Alu -2 310 1 290 319 18 0 chr2 56960679 56960792 -193727062 + L1MD2 LINE L1 6245 6359 0 276 100 0 0 chr2 56961726 56961766 -193726088 + (GGGA)n Simple_repeat Simple_repeat 3 42 0 276 203 62 16 chr2 56966889 56966953 -193720901 - MIR3 SINE MIR -33 175 109 287 138 0 15 chr2 56968740 56968805 -193719049 + (CCG)n Simple_repeat Simple_repeat 3 66 0 23 0 0 0 chr2 56968806 56968829 -193719025 + GC_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 56968928 56968951 -193718903 + GC_rich Low_complexity Low_complexity 1 23 0 1274 130 190 8 chr2 56969399 56969646 -193718208 - AluJb SINE Alu -15 297 6 503 184 11 0 chr2 56969672 56969759 -193718095 + AluJo/FLAM SINE Alu 42 129 -183 1995 98 21 0 chr2 56969761 56970046 -193717808 + AluSx SINE Alu 14 304 -8 641 250 34 0 chr2 56970054 56970230 -193717624 - Tigger7 DNA MER2_type -1906 581 400 1718 192 3 0 chr2 56970233 56970541 -193717313 - AluJo SINE Alu -3 309 1 1995 128 0 17 chr2 56970632 56970930 -193716924 + AluSx SINE Alu 9 301 -11 326 241 12 0 chr2 56970932 56971015 -193716839 + MLT1H LTR MaLR 124 207 -342 1606 167 18 14 chr2 56971020 56971323 -193716531 + AluJb SINE Alu 1 304 0 536 103 0 0 chr2 56971336 56971404 -193716450 + AluJ/FLAM SINE Alu 15 82 -230 2044 107 13 3 chr2 56971431 56971729 -193716125 - AluSq SINE Alu -12 301 1 252 208 274 9 chr2 56971808 56971914 -193715940 + L2 LINE L2 3139 3272 0 783 277 21 8 chr2 56972127 56972365 -193715489 - L1ME LINE L1 -338 5783 5543 663 158 0 0 chr2 56972886 56973000 -193714854 + AluJb SINE Alu 192 305 -7 2293 108 0 0 chr2 56973004 56973310 -193714544 + AluSg SINE Alu 1 306 -4 2206 105 3 10 chr2 56973312 56973626 -193714228 + AluSx SINE Alu 1 312 0 594 154 0 0 chr2 56973626 56973717 -193714137 - AluJo/FLAM SINE Alu -187 125 35 524 194 106 41 chr2 56973721 56973787 -193714067 - MLT1C LTR MaLR -278 189 129 2142 96 0 22 chr2 56973787 56974101 -193713753 - AluSx SINE Alu -5 307 1 524 194 106 41 chr2 56974101 56974204 -193713650 - MLT1C LTR MaLR -338 129 9 1616 127 0 16 chr2 56974802 56975054 -193712800 + AluJo SINE Alu 43 290 -22 2476 73 0 10 chr2 56975064 56975377 -193712477 + AluSq SINE Alu 1 310 -3 882 131 0 0 chr2 56975481 56975603 -193712251 + AluSq/x SINE Alu 1 122 -190 1451 133 63 47 chr2 56975768 56975807 -193712047 + THE1B LTR MaLR 1 38 -326 2371 54 0 38 chr2 56975807 56976120 -193711734 - AluY SINE Alu -10 301 1 1451 133 63 47 chr2 56976120 56976255 -193711599 + THE1B LTR MaLR 38 169 -195 1729 127 0 4 chr2 56976255 56976507 -193711347 - AluSx SINE Alu -20 292 42 1451 133 63 47 chr2 56976507 56976632 -193711222 + THE1B LTR MaLR 169 306 -58 2292 90 6 3 chr2 56976633 56976944 -193710910 + AluSq SINE Alu 1 312 -1 317 156 52 0 chr2 56976944 56977021 -193710833 + MLT1B LTR MaLR 99 179 -211 1173 168 114 79 chr2 56977022 56977162 -193710692 + AluJo SINE Alu 2 136 -166 2248 75 3 0 chr2 56977162 56977454 -193710400 + AluY SINE Alu 1 293 -18 2091 116 10 0 chr2 56977464 56977765 -193710089 + AluSx SINE Alu 1 304 -8 1173 168 114 79 chr2 56977765 56977893 -193709961 + AluJo SINE Alu 144 291 -11 2049 152 0 0 chr2 56977914 56978224 -193709630 + AluSq SINE Alu 1 310 -3 2264 87 3 3 chr2 56978235 56978533 -193709321 + AluSp SINE Alu 1 298 -15 2211 111 0 0 chr2 56978947 56979253 -193708601 - AluSx SINE Alu -6 306 1 1120 140 0 22 chr2 56979561 56979740 -193708114 - AluJb SINE Alu 0 312 138 2012 130 7 0 chr2 56979751 56980052 -193707802 - AluSx SINE Alu -9 303 1 2024 133 3 16 chr2 56980052 56980359 -193707495 - AluSx SINE Alu -8 304 1 1121 184 60 4 chr2 56980362 56980628 -193707226 - L1MC1 LINE L1 -229 6104 5824 1145 151 0 0 chr2 56980629 56980801 -193707053 - AluSg/x SINE Alu -15 297 126 1937 123 3 22 chr2 56980801 56981119 -193706735 - AluSq SINE Alu 0 313 2 2070 120 0 0 chr2 56981122 56981414 -193706440 - AluSg SINE Alu -18 292 1 313 161 81 0 chr2 56981415 56981477 -193706377 + L1MD3 LINE L1 7928 7994 -1 688 182 0 0 chr2 56981498 56981608 -193706246 + FLAM_C SINE Alu 1 110 -33 21 20 0 40 chr2 56981608 56981629 -193706225 + AT_rich Low_complexity Low_complexity 1 21 -27 1944 117 4 4 chr2 56981629 56981910 -193705944 - AluSc SINE Alu -16 293 13 2404 69 10 0 chr2 56981918 56982223 -193705631 - AluY SINE Alu -3 308 1 21 20 0 40 chr2 56982223 56982242 -193705612 + AT_rich Low_complexity Low_complexity 28 48 0 2200 103 3 0 chr2 56982997 56983298 -193704556 - AluSx SINE Alu -10 302 1 427 208 112 24 chr2 56983747 56983872 -193703982 + MLT1C LTR MaLR 7 142 -325 1242 175 0 44 chr2 57083872 57084100 -193603754 + AluJo SINE Alu 75 292 -20 337 81 16 0 chr2 57084109 57084171 -193603683 + Tigger3(Golem) DNA MER2_type 2510 2572 -457 837 160 8 0 chr2 57084175 57084306 -193603548 + AluJo SINE Alu 3 134 -178 1973 112 66 54 chr2 57084306 57084490 -193603364 + Tigger3(Golem) DNA MER2_type 2559 2750 -278 1723 180 3 3 chr2 57084490 57084784 -193603070 - AluJb SINE Alu -13 299 6 1973 112 66 54 chr2 57084784 57084945 -193602909 + Tigger3(Golem) DNA MER2_type 2750 2908 -120 3361 96 181 13 chr2 57084945 57085488 -193602366 - MER51A LTR ERV1 0 634 1 910 167 20 7 chr2 57085488 57085632 -193602222 + Tigger3(Golem) DNA MER2_type 2879 3024 -5 21 36 0 0 chr2 57085632 57085660 -193602194 + AT_rich Low_complexity Low_complexity 1 28 0 324 270 169 20 chr2 57086119 57086267 -193601587 - L2 LINE L2 0 3272 3103 414 0 0 0 chr2 57086566 57086612 -193601242 + (TG)n Simple_repeat Simple_repeat 1 46 0 2067 147 0 7 chr2 57086959 57087259 -193600595 + AluJb SINE Alu 1 298 -14 231 36 0 0 chr2 57087805 57087833 -193600021 + (CAT)n Simple_repeat Simple_repeat 3 30 0 1952 131 4 0 chr2 57088033 57088308 -193599546 + AluSq SINE Alu 1 276 -37 218 143 54 18 chr2 57088343 57088399 -193599455 + (TA)n Simple_repeat Simple_repeat 1 58 0 298 305 168 32 chr2 57088404 57088500 -193599354 + L1M4 LINE L1 3769 3851 -2295 225 65 0 0 chr2 57088500 57088531 -193599323 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 298 305 168 32 chr2 57088531 57088719 -193599135 + L1M4 LINE L1 3851 4092 -2054 604 192 84 48 chr2 57088733 57088797 -193599057 - MLT1I LTR MaLR -12 397 337 2300 104 7 0 chr2 57088797 57089104 -193598750 - AluY SINE Alu -2 309 1 604 192 84 48 chr2 57089104 57089206 -193598648 - MLT1I LTR MaLR -72 337 225 1764 222 28 70 chr2 57089207 57089381 -193598473 + L1ME3A LINE L1 5649 5829 -341 2214 126 17 111 chr2 57089381 57089597 -193598257 + MSTB1 LTR MaLR 1 236 -196 1885 136 34 3 chr2 57089597 57089891 -193597963 + AluSx SINE Alu 7 309 -3 2214 126 17 111 chr2 57089891 57090080 -193597774 + MSTB1 LTR MaLR 236 441 9 2199 101 31 0 chr2 57090080 57090367 -193597487 - AluSx SINE Alu -16 296 1 2132 125 3 3 chr2 57090367 57090662 -193597192 - AluSx SINE Alu -17 295 1 2214 126 17 111 chr2 57090662 57090731 -193597123 + MSTB1 LTR MaLR 358 432 0 1764 222 28 70 chr2 57090731 57091101 -193596753 + L1ME3A LINE L1 5829 6170 0 2075 165 42 91 chr2 57091180 57091824 -193596030 - L1MC/D LINE L1 -547 5695 5105 706 177 0 32 chr2 57091824 57091948 -193595906 + FLAM_A SINE Alu 4 123 -10 2075 165 42 91 chr2 57091948 57092118 -193595736 - L1MC/D LINE L1 -1137 5105 4928 1788 153 0 75 chr2 57092130 57092463 -193595391 - AluJb SINE Alu -4 308 1 1972 118 3 11 chr2 57092474 57092785 -193595069 - AluSx SINE Alu 0 309 1 574 159 257 0 chr2 57093013 57093126 -193594728 - FLAM_C SINE Alu 0 143 2 287 254 0 0 chr2 57093240 57093307 -193594547 + LTR67 LTR ERVL 3 69 -488 2244 129 3 0 chr2 57093705 57094015 -193593839 - AluSx SINE Alu 0 312 2 2246 108 0 9 chr2 57094104 57094420 -193593434 + AluSq SINE Alu 1 313 0 347 141 0 152 chr2 57094470 57094523 -193593331 - MER5A DNA MER1_type -70 119 86 2484 72 0 0 chr2 57094523 57094829 -193593025 - AluY SINE Alu -1 310 5 347 141 0 152 chr2 57094829 57094874 -193592980 - MER5A DNA MER1_type -103 86 36 1006 197 27 4 chr2 57094918 57095127 -193592727 - L1MA5 LINE L1 -350 5814 5623 2278 112 7 0 chr2 57095139 57095442 -193592412 - AluSp SINE Alu -8 305 1 841 230 6 0 chr2 57095528 57095702 -193592152 - FAM SINE Alu 0 175 1 819 125 32 14 chr2 57095755 57095972 -193591882 + CT-rich Low_complexity Low_complexity 1 221 0 674 328 8 8 chr2 57096039 57096286 -193591568 - L2 LINE L2 -541 2773 2527 2281 114 0 0 chr2 57096286 57096585 -193591269 + AluSx SINE Alu 1 299 -13 1865 136 0 15 chr2 57096657 57096929 -193590925 + AluSx SINE Alu 1 268 -44 1834 136 70 0 chr2 57097163 57097450 -193590404 + AluSx SINE Alu 1 307 -5 1997 102 12 74 chr2 57097641 57097786 -193590068 + AluSc SINE Alu 1 117 -192 2557 64 0 6 chr2 57097786 57098099 -193589755 + AluY SINE Alu 1 311 0 1997 102 12 74 chr2 57098099 57098277 -193589577 + AluSc SINE Alu 117 304 -5 640 132 0 0 chr2 57099201 57099348 -193588506 - AluSx SINE Alu 0 337 191 1099 113 0 0 chr2 57099349 57099490 -193588364 - AluSx SINE Alu -171 141 1 2032 122 0 23 chr2 57099588 57099891 -193587963 + AluSq SINE Alu 1 296 -17 899 302 31 59 chr2 57099983 57100460 -193587394 - LTR16B LTR ERVL 0 464 1 201 122 49 0 chr2 57100937 57100978 -193586876 + (TATAG)n Simple_repeat Simple_repeat 3 45 0 2175 125 0 0 chr2 57101055 57101343 -193586511 - AluSx SINE Alu -24 288 1 250 373 55 13 chr2 57101895 57102131 -193585723 - L2 LINE L2 -1383 1931 1686 360 306 104 31 chr2 57102195 57102270 -193585584 - MLT1I LTR MaLR -7 402 334 1686 160 41 7 chr2 57102270 57102564 -193585290 + AluJo SINE Alu 1 304 -8 360 306 104 31 chr2 57102564 57102803 -193585051 - MLT1I LTR MaLR -75 334 68 24 103 0 0 chr2 57103790 57103877 -193583977 + AT_rich Low_complexity Low_complexity 1 87 0 810 296 39 53 chr2 57104242 57104597 -193583257 - MLT1I LTR MaLR 0 409 60 1207 215 16 58 chr2 57104810 57105122 -193582732 + AluJo SINE Alu 1 299 -13 2147 136 0 0 chr2 57105136 57105431 -193582423 - AluSq SINE Alu -18 295 1 282 241 58 23 chr2 57105432 57105519 -193582335 - MER5A DNA MER1_type -50 139 50 5948 148 5 55 chr2 57105571 57106080 -193581774 - L1MC1 LINE L1 -1 6332 5799 2099 119 20 23 chr2 57106080 57106382 -193581472 - AluSg SINE Alu -9 301 1 183 42 0 0 chr2 57106382 57106406 -193581448 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 2269 75 14 0 chr2 57106406 57106685 -193581169 - AluSp SINE Alu -30 283 1 2004 143 3 3 chr2 57106685 57106985 -193580869 - AluSx SINE Alu -12 300 1 2312 88 0 0 chr2 57106993 57107297 -193580557 - AluSp SINE Alu 0 304 1 5948 148 5 55 chr2 57107297 57107709 -193580145 - L1MC1 LINE L1 -538 5795 5364 2215 130 0 9 chr2 57107709 57108024 -193579830 - AluSx SINE Alu 0 312 1 5948 148 5 55 chr2 57108024 57108142 -193579712 - L1MC1 LINE L1 -969 5364 5337 2463 79 3 3 chr2 57108142 57108447 -193579407 - AluY SINE Alu -6 305 1 5948 148 5 55 chr2 57108447 57108512 -193579342 - L1MC1 LINE L1 -996 5337 5270 1042 88 0 0 chr2 57108525 57108662 -193579192 + AluSg/x SINE Alu 174 310 0 1954 221 105 61 chr2 57108670 57109080 -193578774 - L1MC1 LINE L1 -864 5282 4891 2109 128 3 0 chr2 57109080 57109376 -193578478 - AluSx SINE Alu -15 297 1 1954 221 105 61 chr2 57109376 57109715 -193578139 - L1MC1 LINE L1 -1255 4891 4500 1430 185 10 60 chr2 57109738 57109893 -193577961 - AluJo SINE Alu -19 283 149 2398 72 3 0 chr2 57109893 57110184 -193577670 - AluSq SINE Alu -21 292 1 1430 185 10 60 chr2 57110184 57110326 -193577528 - AluJo SINE Alu -153 149 1 609 197 8 0 chr2 57110360 57110477 -193577377 - AluJb SINE Alu -1 311 194 310 196 0 0 chr2 57110484 57110535 -193577319 - LTR8 LTR ERV1 -390 337 287 2297 101 0 43 chr2 57110580 57110906 -193576948 + AluSx SINE Alu 1 312 0 998 148 69 152 chr2 57110934 57110987 -193576867 - LTR8 LTR ERV1 -461 266 210 2365 94 0 3 chr2 57110987 57111285 -193576569 - AluSc SINE Alu -7 302 6 998 148 69 152 chr2 57111285 57111321 -193576533 - LTR8 LTR ERV1 -517 210 173 2139 137 3 0 chr2 57111321 57111628 -193576226 + AluSx SINE Alu 1 308 -4 998 148 69 152 chr2 57111628 57111827 -193576027 - LTR8 LTR ERV1 -554 173 1 751 176 0 65 chr2 57112323 57112476 -193575378 - AluJb SINE Alu -103 209 67 183 271 0 118 chr2 57112499 57112584 -193575270 - L2 LINE L2 -1856 1458 1384 2383 95 0 0 chr2 57112608 57112904 -193574950 + AluSx SINE Alu 1 296 -16 1891 138 25 11 chr2 57113014 57113141 -193574713 + AluSx SINE Alu 1 125 -187 189 0 0 0 chr2 57113141 57113162 -193574692 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1891 138 25 11 chr2 57113162 57113317 -193574537 + AluSx SINE Alu 125 287 -25 393 325 18 0 chr2 57113612 57113726 -193574128 - MIR SINE MIR -131 131 16 2371 104 0 0 chr2 57113939 57114236 -193573618 + AluSq SINE Alu 1 297 -16 700 112 0 0 chr2 57114244 57114342 -193573512 + L1MA3 LINE L1 6203 6300 -5 327 104 0 0 chr2 57114455 57114503 -193573351 + (T)n Simple_repeat Simple_repeat 1 48 0 1339 139 0 0 chr2 57114519 57114706 -193573148 - AluSx SINE Alu -125 187 1 2180 131 0 0 chr2 57115691 57115989 -193571865 + AluSx SINE Alu 1 298 -14 1243 152 13 48 chr2 57116019 57116249 -193571605 + AluJo SINE Alu 59 280 -32 189 0 0 0 chr2 57116249 57116270 -193571584 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 964 239 91 42 chr2 57116360 57116901 -193570953 + L2 LINE L2 2539 3096 -217 549 0 0 0 chr2 57116993 57117054 -193570800 + (TG)n Simple_repeat Simple_repeat 2 62 0 2073 117 7 0 chr2 57117054 57117337 -193570517 - AluSx SINE Alu -27 285 1 201 256 0 0 chr2 57117453 57117492 -193570362 + polypurine Low_complexity Low_complexity 3 41 0 2148 125 0 10 chr2 57117613 57117918 -193569936 + AluSq SINE Alu 1 302 -11 2135 116 16 13 chr2 57118047 57118358 -193569496 - AluSx SINE Alu 0 312 1 28 29 0 0 chr2 57118444 57118479 -193569375 + AT_rich Low_complexity Low_complexity 1 35 0 822 247 0 0 chr2 57118487 57118661 -193569193 - AluJo SINE Alu -2 310 137 195 200 13 53 chr2 57118747 57118822 -193569032 + MER5A DNA MER1_type 4 75 -114 1348 150 6 121 chr2 57118823 57118969 -193568885 + AluY SINE Alu 2 95 -216 1797 109 16 4 chr2 57118969 57119217 -193568637 + AluSp SINE Alu 4 254 -59 1348 150 6 121 chr2 57119217 57119383 -193568471 + AluY SINE Alu 95 278 -33 387 0 0 0 chr2 57119383 57119426 -193568428 + (CA)n Simple_repeat Simple_repeat 1 43 0 286 215 258 11 chr2 57119427 57119520 -193568334 + MER5A DNA MER1_type 67 182 -7 699 200 8 8 chr2 57119572 57119702 -193568152 - AluJo SINE Alu -182 130 1 21 0 0 0 chr2 57120091 57120112 -193567742 + AT_rich Low_complexity Low_complexity 1 21 0 917 208 68 114 chr2 57120337 57120463 -193567391 - MSTD LTR MaLR 0 396 266 2566 53 0 0 chr2 57120463 57120762 -193567092 - AluY SINE Alu -12 299 1 917 208 68 114 chr2 57120762 57120996 -193566858 - MSTD LTR MaLR -130 266 55 2041 125 54 0 chr2 57120996 57121292 -193566562 - AluSx SINE Alu 0 312 1 917 208 68 114 chr2 57121292 57121343 -193566511 - MSTD LTR MaLR -341 55 3 726 183 0 0 chr2 57121611 57121737 -193566117 - FLAM_C SINE Alu -7 126 1 826 186 90 23 chr2 57121909 57122086 -193565768 - MER5A DNA MER1_type 0 189 1 760 197 0 0 chr2 57122269 57122396 -193565458 + FLAM_C SINE Alu 2 128 -5 2080 133 10 0 chr2 57122489 57122782 -193565072 - AluSx SINE Alu -16 296 1 26 0 0 0 chr2 57122782 57122808 -193565046 + AT_rich Low_complexity Low_complexity 1 26 0 1643 197 0 17 chr2 57122809 57123109 -193564745 - AluJo SINE Alu -17 295 1 737 156 0 16 chr2 57123109 57123231 -193564623 - AluJ SINE Alu -9 303 184 626 189 9 0 chr2 57123231 57123337 -193564517 - AluJ SINE Alu -204 108 2 2262 106 0 0 chr2 57123347 57123657 -193564197 - AluSx SINE Alu 0 310 1 2125 120 23 0 chr2 57123675 57123974 -193563880 - AluSq SINE Alu -7 306 1 293 262 26 89 chr2 57124214 57124267 -193563587 - MARNA DNA Mariner -101 485 430 907 251 37 0 chr2 57124267 57124482 -193563372 + MER58A DNA MER1_type 2 224 0 293 262 26 89 chr2 57124482 57124619 -193563235 - MARNA DNA Mariner -156 430 307 3396 134 24 6 chr2 57124651 57125188 -193562666 - LTR10A LTR ERV1 -62 547 1 388 230 75 50 chr2 57125233 57125394 -193562460 - MARNA DNA Mariner -294 292 128 372 229 95 0 chr2 57125788 57125893 -193561961 - L1MC4 LINE L1 0 8042 7928 293 153 0 17 chr2 57125894 57125953 -193561901 + CT-rich Low_complexity Low_complexity 3 60 0 256 158 0 0 chr2 57126060 57126123 -193561731 - Alu SINE Alu 0 306 244 1637 182 14 14 chr2 57126123 57126419 -193561435 - AluJo SINE Alu -16 296 1 235 196 0 20 chr2 57126431 57126482 -193561372 + MER34B LTR ERV1 43 92 -473 * 1021 205 75 49 chr2 57126463 57126858 -193560996 + MER39 LTR ERV1 279 542 0 475 211 28 2 chr2 57126952 57127065 -193560789 - L1MC/D LINE L1 -492 5674 5574 606 175 10 0 chr2 57127067 57127170 -193560684 - FLAM_A SINE Alu -17 125 22 586 274 61 19 chr2 57127175 57127453 -193560401 - L1MC/D LINE L1 -586 5578 5293 * 9311 152 26 16 chr2 57127448 57127829 -193560025 + L1PB1 LINE L1 3403 3779 -2372 1866 146 35 7 chr2 57127829 57128116 -193559738 + AluSx SINE Alu 1 295 -17 9311 152 26 16 chr2 57128116 57128732 -193559122 + L1PB1 LINE L1 3779 4388 -1763 180 0 0 0 chr2 57128732 57128752 -193559102 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 9311 152 26 16 chr2 57128752 57129551 -193558303 + L1PB1 LINE L1 4388 5178 -973 1940 120 0 66 chr2 57129551 57129868 -193557986 + AluSx SINE Alu 1 296 -16 9311 152 26 16 chr2 57129868 57130785 -193557069 + L1PB1 LINE L1 5178 6134 -17 529 151 0 0 chr2 57130782 57130868 -193556986 - L1MC3 LINE L1 -27 7758 7673 * 1262 208 127 69 chr2 57130874 57131407 -193556447 + MER39 LTR ERV1 1 542 0 2552 152 10 55 chr2 57131410 57131567 -193556287 - L1MC3 LINE L1 -125 7660 7497 2326 109 0 10 chr2 57131567 57131880 -193555974 - AluSx SINE Alu -2 310 1 2552 152 10 55 chr2 57131880 57132063 -193555791 - L1MC3 LINE L1 -288 7497 7346 2150 211 68 45 chr2 57132063 57132619 -193555235 + LTR48B LTR ERV1 1 575 -69 1473 207 7 27 chr2 57132619 57132919 -193554935 + AluJb SINE Alu 6 299 -13 2150 211 68 45 chr2 57132919 57132991 -193554863 + LTR48B LTR ERV1 575 644 0 2552 152 10 55 chr2 57132991 57133137 -193554717 - L1MC3 LINE L1 -439 7346 7195 354 194 0 0 chr2 57133148 57133220 -193554634 + (TA)n Simple_repeat Simple_repeat 2 73 0 859 304 64 55 chr2 57133605 57134243 -193553611 - PABL_B LTR ERV1 0 667 24 246 220 0 0 chr2 57134271 57134321 -193553533 - PABL_B LTR ERV1 -617 50 1 7475 49 1 0 chr2 57134863 57136447 -193551407 - L1PA5 LINE L1 0 6154 4570 1497 82 0 0 chr2 57136447 57136642 -193551212 + L1PA5 LINE L1 4379 4573 -1573 197 318 57 0 chr2 57136647 57136735 -193551119 - L2 LINE L2 -248 3024 2932 469 202 84 8 chr2 57136817 57136936 -193550918 + LTR23 LTR ERV1 1 128 -309 1556 201 0 48 chr2 57136936 57137250 -193550604 - AluJb SINE Alu -13 299 1 729 315 0 0 chr2 57137373 57137573 -193550281 - L2 LINE L2 -560 2754 2555 387 230 27 0 chr2 57137697 57137771 -193550083 + MER7A DNA MER2_type 1 76 -272 319 78 176 0 chr2 57137773 57137824 -193550030 + U7 snRNA snRNA 2 61 -2 1955 104 0 0 chr2 57137841 57138090 -193549764 + AluSx SINE Alu 29 277 -35 1944 141 0 0 chr2 57138107 57138391 -193549463 + MER7A DNA MER2_type 63 344 -2 2411 83 0 3 chr2 57138468 57138770 -193549084 + AluSg SINE Alu 3 303 -7 309 253 20 40 chr2 57138798 57138897 -193548957 + MIR SINE MIR 51 147 -115 2488 80 0 0 chr2 57138991 57139302 -193548552 - AluY SINE Alu 0 311 1 227 163 23 93 chr2 57139654 57139740 -193548114 + L1MDa LINE L1 2509 2588 -3952 387 150 192 7 chr2 57139798 57139823 -193548031 - MLT1D LTR MaLR -412 93 74 1901 125 11 7 chr2 57139823 57140131 -193547723 - AluSx SINE Alu 0 309 1 387 150 192 7 chr2 57140131 57140208 -193547646 - MLT1D LTR MaLR -431 74 1 1866 166 0 7 chr2 57140852 57141147 -193546707 - AluSx SINE Alu -14 298 6 1737 186 10 0 chr2 57141154 57141445 -193546409 - AluJb SINE Alu -18 294 1 354 342 76 49 chr2 57141887 57142150 -193545704 + L2 LINE L2 2911 3180 -92 588 209 65 22 chr2 57142187 57142326 -193545528 - MIR SINE MIR -21 241 97 1064 256 101 50 chr2 57142379 57142411 -193545443 - L2 LINE L2 0 3313 3284 360 0 0 0 chr2 57142411 57142451 -193545403 + (TA)n Simple_repeat Simple_repeat 1 40 0 1064 256 101 50 chr2 57142451 57142903 -193544951 - L2 LINE L2 -29 3284 2804 1703 180 3 25 chr2 57143012 57143329 -193544525 - AluJb SINE Alu -2 310 1 819 143 56 0 chr2 57143329 57143455 -193544399 - AluSg SINE Alu -177 133 1 250 211 0 28 chr2 57143467 57143538 -193544316 - L2 LINE L2 -568 2746 2678 905 183 12 12 chr2 57143538 57143557 -193544297 - AluJ SINE Alu -7 305 287 459 0 0 0 chr2 57143557 57143608 -193544246 + (TG)n Simple_repeat Simple_repeat 2 52 0 905 183 12 12 chr2 57143608 57143757 -193544097 - AluJ SINE Alu -24 288 137 3717 230 98 122 chr2 57143760 57144851 -193543003 - L2 LINE L2 -627 2687 1516 973 120 0 0 chr2 57144851 57144984 -193542870 - AluJ SINE Alu -179 133 1 3717 230 98 122 chr2 57144984 57145496 -193542358 - L2 LINE L2 -1798 1516 993 1023 158 6 0 chr2 57145533 57145691 -193542163 - FRAM SINE Alu -6 160 2 2363 91 7 0 chr2 57145736 57146043 -193541811 - AluSp SINE Alu -4 309 1 260 27 27 0 chr2 57146799 57146836 -193541018 + (TG)n Simple_repeat Simple_repeat 2 39 0 919 237 91 20 chr2 57147041 57147294 -193540560 + MER20B DNA MER1_type 1 271 -512 435 219 88 44 chr2 57147289 57147449 -193540405 + MER20B DNA MER1_type 615 781 -2 * 1448 147 70 40 chr2 57148050 57148322 -193539532 + AluJb SINE Alu 1 280 -32 4387 121 13 2 chr2 57148573 57149169 -193538685 + LTR26 LTR ERV1 1 603 0 2329 89 0 0 chr2 57149272 57149564 -193538290 + AluY SINE Alu 1 292 -19 2083 132 10 0 chr2 57149626 57149930 -193537924 + AluJb SINE Alu 1 307 -5 1984 117 10 36 chr2 57149933 57150240 -193537614 + AluSx SINE Alu 3 301 -11 1027 183 17 33 chr2 57150406 57150586 -193537268 + MER45A DNA AcHobo 1 177 -1 648 207 121 2 chr2 57150593 57150746 -193537108 + MIR SINE MIR 19 188 -62 22 35 0 0 chr2 57151843 57151872 -193535982 + AT_rich Low_complexity Low_complexity 1 29 0 1548 207 10 7 chr2 57151881 57152180 -193535674 + AluJb SINE Alu 1 300 -12 821 179 48 7 chr2 57152254 57152399 -193535455 - FRAM SINE Alu -12 154 4 308 106 0 21 chr2 57152402 57152449 -193535405 - L1MB3 LINE L1 -47 6136 6091 1911 128 51 0 chr2 57152730 57153003 -193534851 + AluSx SINE Alu 1 287 -25 230 242 125 25 chr2 57153077 57153197 -193534657 + L2 LINE L2 1576 1707 -1607 244 269 46 102 chr2 57153290 57153487 -193534367 - HAL1 LINE L1 -1 2506 2321 * 1459 155 82 23 chr2 57153485 57153788 -193534066 - L1MD3 LINE L1 -1029 6966 6646 511 143 36 0 chr2 57153788 57153872 -193533982 - MER6 DNA MER2_type 0 865 58 437 194 54 0 chr2 57153905 57153998 -193533856 - MER6B DNA MER2_type -70 140 43 1525 179 17 10 chr2 57154006 57154308 -193533546 + AluJo SINE Alu 4 307 -5 492 278 19 2 chr2 57154326 57154465 -193533389 - L1MC3 LINE L1 -18 6148 6012 1515 190 17 10 chr2 57154512 57154801 -193533053 - AluJo SINE Alu -12 300 10 2042 127 0 7 chr2 57155501 57155820 -193532034 + AluSx SINE Alu 2 318 0 234 193 0 0 chr2 57155823 57155880 -193531974 + GA-rich Low_complexity Low_complexity 1 57 0 768 187 82 23 chr2 57156645 57156816 -193531038 + LTR41 LTR ERVL 1 181 -592 327 240 143 25 chr2 57157384 57157619 -193530235 + LTR41 LTR ERVL 507 792 -3 2158 112 3 0 chr2 57158766 57159053 -193528801 - AluSx SINE Alu -4 308 21 22 0 0 0 chr2 57159115 57159137 -193528717 + AT_rich Low_complexity Low_complexity 1 22 0 434 301 25 56 chr2 57159214 57159410 -193528444 - MIR SINE MIR -50 212 23 355 250 110 60 chr2 57161988 57162348 -193525506 - HAL1 LINE L1 -6 2501 2160 2379 122 42 118 chr2 57162348 57162874 -193524980 - LTR19A LTR ERV1 0 486 1 355 250 110 60 chr2 57162874 57162944 -193524910 - HAL1 LINE L1 -347 2160 2095 2047 128 26 3 chr2 57162944 57163248 -193524606 - AluSq SINE Alu -1 312 2 355 250 110 60 chr2 57163248 57164314 -193523540 - HAL1 LINE L1 -412 2095 826 246 279 36 77 chr2 57164481 57164703 -193523151 - HAL1 LINE L1 -2214 293 81 24 0 0 0 chr2 57164742 57164766 -193523088 + AT_rich Low_complexity Low_complexity 1 24 0 817 173 0 8 chr2 57164766 57164893 -193522961 - FLAM_C SINE Alu -7 126 1 285 266 76 76 chr2 57165030 57165188 -193522666 + MLT1K LTR MaLR 37 194 -394 432 305 0 8 chr2 57165269 57165400 -193522454 - LTR67 LTR ERVL 0 557 428 496 194 19 19 chr2 57165420 57165528 -193522326 - MLT1D LTR MaLR -2 503 396 815 213 7 0 chr2 57165531 57165672 -193522182 + AluJo SINE Alu 3 144 -168 578 166 65 29 chr2 57165723 57165862 -193521992 + MER20B DNA MER1_type 629 772 -11 502 217 28 84 chr2 57166716 57166859 -193520995 - L2 LINE L2 -1 3271 3137 39 31 0 16 chr2 57166859 57166905 -193520949 + AT_rich Low_complexity Low_complexity 1 47 -16 807 169 0 0 chr2 57166905 57167023 -193520831 - FLAM_C SINE Alu -15 118 1 39 31 0 16 chr2 57167023 57167040 -193520814 + AT_rich Low_complexity Low_complexity 47 63 0 977 255 68 3 chr2 57167110 57167556 -193520298 + LTR33 LTR ERVL 5 514 -7 766 147 16 23 chr2 57167757 57167886 -193519968 - FLAM_C SINE Alu -5 128 1 273 261 134 93 chr2 57167886 57168177 -193519677 + LTR67 LTR ERVL 13 315 -242 333 238 0 12 chr2 57168258 57168338 -193519516 + LTR67 LTR ERVL 474 552 -5 314 321 131 68 chr2 57168375 57168547 -193519307 - L2 LINE L2 -512 2802 2642 2235 84 0 0 chr2 57168547 57168863 -193518991 + AluSg SINE Alu 7 322 0 314 321 131 68 chr2 57168863 57169041 -193518813 - L2 LINE L2 -672 2642 2429 1979 138 72 36 chr2 57169831 57170193 -193517661 + THE1C LTR MaLR 1 375 0 236 322 83 16 chr2 57170659 57170780 -193517074 + MIR3 SINE MIR 3 131 -77 239 296 0 0 chr2 57172104 57172158 -193515696 + MLT1K LTR MaLR 209 262 -326 234 221 23 81 chr2 57172387 57172473 -193515381 + MLT1K LTR MaLR 523 588 0 25 31 0 0 chr2 57172617 57172649 -193515205 + AT_rich Low_complexity Low_complexity 1 32 0 1788 151 3 31 chr2 57172651 57172968 -193514886 - AluJo SINE Alu -4 308 1 2505 56 0 0 chr2 57173118 57173406 -193514448 + AluY SINE Alu 1 288 -23 196 29 29 29 chr2 57173409 57173443 -193514411 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2349 115 3 0 chr2 57173726 57174038 -193513816 + AluSp SINE Alu 1 313 0 1620 168 67 3 chr2 57174470 57174636 -193513218 - AluJb SINE Alu -9 303 110 282 29 0 0 chr2 57174636 57174671 -193513183 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1620 168 67 3 chr2 57174671 57174789 -193513065 - AluJb SINE Alu -202 110 1 1874 233 10 0 chr2 57174805 57175192 -193512662 + L1M4 LINE L1 3921 4311 -1835 1235 193 37 0 chr2 57175196 57175414 -193512440 - AluJb SINE Alu -5 307 82 287 154 19 0 chr2 57175414 57175466 -193512388 + L1M4 LINE L1 4317 4369 -1777 2314 93 0 0 chr2 57175466 57175755 -193512099 + AluSx SINE Alu 1 289 -23 1150 191 35 4 chr2 57175773 57176029 -193511825 + L1M4 LINE L1 4345 4608 -1538 627 214 8 17 chr2 57176035 57176178 -193511676 - AluJb SINE Alu 0 309 168 609 71 40 0 chr2 57176189 57176288 -193511566 + CT-rich Low_complexity Low_complexity 1 103 0 2108 146 7 0 chr2 57176292 57176600 -193511254 - AluSx SINE Alu -2 310 1 3623 170 32 22 chr2 57176625 57176983 -193510871 + L1M4 LINE L1 4625 4978 -1200 855 161 15 0 chr2 57176983 57177113 -193510741 + FLAM_A SINE Alu 1 132 -1 3623 170 32 22 chr2 57177113 57177794 -193510060 + L1M4 LINE L1 4978 5667 -511 1663 199 0 17 chr2 57177795 57178097 -193509757 + AluJo SINE Alu 1 297 -15 507 178 0 0 chr2 57178099 57178172 -193509682 + FLAM SINE Alu 47 119 -24 737 116 0 0 chr2 57178198 57178310 -193509544 + L1MB8 LINE L1 6057 6168 -10 387 0 0 0 chr2 57178316 57178359 -193509495 + (TG)n Simple_repeat Simple_repeat 2 44 0 2141 182 66 18 chr2 57178362 57178757 -193509097 - MLT2D LTR ERVL 0 414 1 1964 153 3 6 chr2 57178954 57179267 -193508587 + AluSx SINE Alu 1 312 0 2184 117 0 0 chr2 57179272 57179562 -193508292 + AluSx SINE Alu 5 294 -18 399 366 0 0 chr2 57180098 57180229 -193507625 - MIR3 SINE MIR -48 160 30 195 272 117 29 chr2 57181076 57181179 -193506675 + L2 LINE L2 3202 3313 0 421 304 32 8 chr2 57181473 57181598 -193506256 - MIR3 SINE MIR -78 130 3 1951 125 80 0 chr2 57181697 57181984 -193505870 - AluSx SINE Alu -2 310 1 234 191 0 48 chr2 57182111 57182174 -193505680 + (TA)n Simple_repeat Simple_repeat 2 61 0 28 61 0 0 chr2 57182271 57182320 -193505534 + AT_rich Low_complexity Low_complexity 1 49 0 2225 102 7 0 chr2 57182342 57182635 -193505219 - AluSx SINE Alu -17 295 1 901 195 33 29 chr2 57183427 57183637 -193504217 - MER69 DNA AcHobo 0 2526 2316 1053 178 180 72 chr2 57184035 57184221 -193503633 - MER69 DNA AcHobo -198 2328 2164 2410 89 3 0 chr2 57184221 57184525 -193503329 - AluSq SINE Alu -8 305 1 773 201 0 15 chr2 57184528 57184662 -193503192 - AluJo/FLAM SINE Alu -169 133 2 1053 178 180 72 chr2 57184662 57184887 -193502967 - MER69 DNA AcHobo -363 2163 1868 655 231 113 25 chr2 57184921 57185053 -193502801 - MER69 DNA AcHobo -438 788 630 1803 174 22 63 chr2 57185053 57185415 -193502439 + MER7A DNA MER2_type 1 345 -1 655 231 113 25 chr2 57185415 57185485 -193502369 - MER69 DNA AcHobo -596 630 568 2186 132 0 0 chr2 57185980 57186283 -193501571 - AluSx SINE Alu -9 303 1 2258 109 7 0 chr2 57186531 57186833 -193501021 + AluSx SINE Alu 1 304 -8 878 184 43 29 chr2 57187579 57187786 -193500068 - MER69 DNA AcHobo -3 2523 2314 2281 113 10 0 chr2 57188020 57188329 -193499525 - AluSx SINE Alu 0 312 1 595 251 32 84 chr2 57188606 57188789 -193499065 + L1MC4 LINE L1 7713 7871 -171 3323 150 12 74 chr2 57188789 57189434 -193498420 + MER6A DNA MER2_type 1 605 0 595 251 32 84 chr2 57189434 57189597 -193498257 + L1MC4 LINE L1 7871 8041 -1 2058 133 3 3 chr2 57189681 57189981 -193497873 - AluSx SINE Alu -11 301 2 447 236 64 0 chr2 57190538 57190678 -193497176 - MER103 DNA DNA -2 164 16 1819 172 0 10 chr2 57191082 57191378 -193496476 - AluJb SINE Alu -9 303 11 251 269 0 0 chr2 57191468 57191520 -193496334 + (TGGA)n Simple_repeat Simple_repeat 4 55 0 23 0 0 0 chr2 57193021 57193044 -193494810 + AT_rich Low_complexity Low_complexity 1 23 0 462 181 0 48 chr2 57193048 57193131 -193494723 + AluJ/FLAM SINE Alu 2 80 -232 1677 157 33 7 chr2 57193207 57193481 -193494373 + AluJb SINE Alu 6 286 -26 2139 122 3 0 chr2 57193601 57193896 -193493958 + AluSx SINE Alu 1 296 -16 2144 112 0 7 chr2 57194086 57194382 -193493472 + AluSg SINE Alu 1 294 -16 507 182 86 86 chr2 57194931 57195140 -193492714 + HAL1 LINE L1 2151 2359 -148 1880 150 7 0 chr2 57195227 57195549 -193492305 - AluSx SINE Alu 0 324 1 242 337 135 22 chr2 57195637 57195999 -193491855 - L2 LINE L2 -654 2660 2258 290 309 8 0 chr2 57196215 57196338 -193491516 + MERVL LTR ERVL 5161 5284 -201 608 283 141 14 chr2 57196532 57196907 -193490947 + LTR16A LTR ERVL 16 457 0 463 272 44 58 chr2 57196923 57197129 -193490725 + HAL1 LINE L1 2245 2447 -60 306 251 77 94 chr2 57197235 57197396 -193490458 + MIR SINE MIR 8 161 -101 2364 70 0 0 chr2 57197396 57197712 -193490142 + AluY SINE Alu 1 316 0 306 251 77 94 chr2 57197712 57197766 -193490088 + MIR SINE MIR 161 214 -48 2304 94 3 7 chr2 57197967 57198266 -193489588 - AluSx SINE Alu -14 298 1 189 0 0 0 chr2 57198270 57198291 -193489563 + (TG)n Simple_repeat Simple_repeat 2 22 0 1823 156 0 0 chr2 57198291 57198573 -193489281 - AluJb SINE Alu -28 284 3 203 156 44 0 chr2 57198579 57198624 -193489230 + T-rich Low_complexity Low_complexity 1 47 0 6769 53 14 46 chr2 57198631 57199750 -193488104 - SVA Other Other -589 1378 433 5912 65 29 21 chr2 57199764 57200617 -193487237 - SVA Other Other -520 866 7 790 178 0 0 chr2 57200636 57200754 -193487100 - FLAM_C SINE Alu -15 118 1 897 227 68 39 chr2 57200851 57201159 -193486695 + L2 LINE L2 2996 3312 -1 486 248 55 79 chr2 57201302 57201592 -193486262 - L1MC5 LINE L1 -37 7924 7642 2059 135 0 20 chr2 57201596 57202013 -193485841 - AluSx SINE Alu 0 411 1 333 276 132 39 chr2 57202013 57202270 -193485584 - L1MC5 LINE L1 -307 7654 7374 1990 159 3 3 chr2 57202471 57202773 -193485081 - AluJo SINE Alu -10 302 1 5282 129 28 33 chr2 57202892 57203776 -193484078 - L1MA8 LINE L1 0 6291 5412 1554 189 10 30 chr2 57204048 57204349 -193483505 - AluJb SINE Alu -13 299 5 2268 86 7 17 chr2 57205133 57205435 -193482419 + AluSg SINE Alu 1 299 -11 198 167 0 0 chr2 57205461 57205497 -193482357 + CT-rich Low_complexity Low_complexity 4 39 0 1936 145 41 12 chr2 57205499 57205837 -193482017 - L1MC2 LINE L1 0 6344 5997 466 197 90 16 chr2 57205848 57205970 -193481884 - L1MC2 LINE L1 -515 5606 5476 375 289 202 9 chr2 57206085 57206303 -193481551 - MLT1K LTR MaLR -47 541 282 1303 244 59 98 chr2 57206325 57206853 -193481001 - MLT1K LTR MaLR -3 585 79 256 213 154 43 chr2 57207308 57207441 -193480413 + MIR SINE MIR 58 205 -3 23 0 0 0 chr2 57208127 57208150 -193479704 + AT_rich Low_complexity Low_complexity 1 23 0 477 292 65 13 chr2 57208447 57208601 -193479253 + MER5B DNA MER1_type 1 162 -16 311 298 144 19 chr2 57208887 57209175 -193478679 + L2 LINE L2 2739 3054 -218 1551 131 42 101 chr2 57209211 57209536 -193478318 - AluJb SINE Alu 0 312 3 339 208 83 0 chr2 57209555 57209627 -193478227 + L2 LINE L2 3195 3272 0 29 0 0 0 chr2 57209970 57209999 -193477855 + AT_rich Low_complexity Low_complexity 1 29 0 566 159 234 0 chr2 57209999 57210106 -193477748 - AluJb SINE Alu -178 134 3 2142 86 7 14 chr2 57210338 57210628 -193477226 - AluSq SINE Alu -25 288 1 226 331 179 7 chr2 57211411 57211556 -193476298 + MER5B DNA MER1_type 8 177 -1 3412 75 4 29 chr2 57212858 57213310 -193474544 + L1PB1 LINE L1 5708 6148 -3 28 0 0 0 chr2 57213311 57213339 -193474515 + AT_rich Low_complexity Low_complexity 1 28 0 1780 148 28 84 chr2 57213442 57213833 -193474021 - L1MC3 LINE L1 -6 7779 7411 830 257 52 40 chr2 57213860 57214261 -193473593 - L1MC5 LINE L1 -32 7929 7524 341 221 39 52 chr2 57216135 57216247 -193471607 + L1ME LINE L1 5527 5618 -503 1227 216 114 25 chr2 57216756 57216985 -193470869 + MER2 DNA MER2_type 2 268 -76 1836 144 0 20 chr2 57216985 57217284 -193470570 - AluJb SINE Alu -13 299 7 1227 216 114 25 chr2 57217284 57217369 -193470485 + MER2 DNA MER2_type 268 344 0 189 0 0 0 chr2 57218125 57218146 -193469708 + (A)n Simple_repeat Simple_repeat 1 21 0 2184 112 0 0 chr2 57218146 57218433 -193469421 + AluSq SINE Alu 1 287 -26 1465 155 99 25 chr2 57218752 57219074 -193468780 + L1MA9 LINE L1 5962 6307 -5 1176 180 76 63 chr2 57219971 57220365 -193467489 - Charlie2 DNA MER1_type -77 2785 2387 2971 139 70 14 chr2 57220386 57220903 -193466951 - LTR10A LTR ERV1 -63 546 1 298 204 105 40 chr2 57220903 57221027 -193466827 - Charlie2 DNA MER1_type -471 2391 2254 1789 138 16 35 chr2 57221027 57221338 -193466516 - AluJo SINE Alu -7 305 1 298 204 105 40 chr2 57221338 57221365 -193466489 - Charlie2 DNA MER1_type -608 2254 2230 949 201 83 105 chr2 57221395 57221518 -193466336 - Charlie2 DNA MER1_type -2471 311 187 2116 84 3 17 chr2 57221518 57221805 -193466049 - L1PB1 LINE L1 -2 6149 5867 949 201 83 105 chr2 57221805 57221994 -193465860 - Charlie2 DNA MER1_type -2595 187 6 300 339 142 6 chr2 57222142 57222325 -193465529 - MIR SINE MIR -44 218 11 521 293 105 0 chr2 57222606 57222797 -193465057 - MIR SINE MIR -11 251 41 1631 150 51 24 chr2 57222797 57223090 -193464764 - AluJo SINE Alu 0 312 12 239 146 42 0 chr2 57223091 57223139 -193464715 + Alu SINE Alu 252 301 0 2693 142 21 24 chr2 57223463 57223940 -193463914 - L1MC2 LINE L1 -146 7639 6138 908 223 125 90 chr2 57224311 57225231 -193462623 - MER52A LTR ERV1 0 1755 660 479 262 176 14 chr2 57225659 57225869 -193461985 + L3 LINE CR1 1188 1431 -146 460 158 237 26 chr2 57227221 57227373 -193460481 - L1MB7 LINE L1 -19 6165 5982 445 188 82 24 chr2 57227629 57227762 -193460092 - MLT1L LTR MaLR -369 142 1 2416 77 0 3 chr2 57227941 57228240 -193459614 - AluSp SINE Alu -15 298 1 1072 173 23 153 chr2 57228444 57228797 -193459057 - AluYb8 SINE Alu -1 307 1 3477 160 24 49 chr2 57229033 57229212 -193458642 - Ricksha DNA DNA -13 3238 3056 2323 100 0 0 chr2 57229212 57229512 -193458342 + AluSq SINE Alu 1 300 -13 3477 160 24 49 chr2 57229512 57229544 -193458310 - Ricksha DNA DNA -195 3056 3025 2232 117 3 0 chr2 57229544 57229853 -193458001 + AluSx SINE Alu 1 310 -2 3477 160 24 49 chr2 57229853 57230409 -193457445 - Ricksha DNA DNA -226 3025 2547 2255 82 0 20 chr2 57230410 57230715 -193457139 + AluSq SINE Alu 1 299 -14 6596 153 15 27 chr2 57230715 57231194 -193456660 - Ricksha DNA DNA -824 2422 1939 2081 96 6 68 chr2 57231194 57231516 -193456338 + AluY SINE Alu 1 302 -9 6596 153 15 27 chr2 57231516 57232130 -193455724 - Ricksha DNA DNA -1307 1939 1340 1545 216 3 10 chr2 57232130 57232421 -193455433 + AluJo SINE Alu 1 289 -23 6596 153 15 27 chr2 57232421 57232453 -193455401 - Ricksha DNA DNA -1906 1340 1309 846 126 0 16 chr2 57232506 57232633 -193455221 - Ricksha DNA DNA -1932 1314 1190 * 2801 130 12 0 chr2 57232627 57233035 -193454819 - Ricksha DNA DNA -2745 501 89 867 165 0 0 chr2 57233044 57233177 -193454677 - FLAM_C SINE Alu -10 133 1 434 145 0 0 chr2 57233177 57233239 -193454615 - Ricksha DNA DNA -3159 87 26 248 196 47 28 chr2 57233318 57233425 -193454429 + (TA)n Simple_repeat Simple_repeat 1 109 0 246 206 66 7 chr2 57233551 57233687 -193454167 + (TA)n Simple_repeat Simple_repeat 2 145 0 1049 259 164 15 chr2 57233741 57234368 -193453486 - L2 LINE L2 -9 3304 2587 251 310 54 144 chr2 57234521 57234834 -193453020 + L2 LINE L2 2902 3186 -86 568 250 110 12 chr2 57235546 57235710 -193452144 - MER5A DNA MER1_type 0 189 10 1702 178 60 35 chr2 57236425 57236489 -193451365 - L1ME1 LINE L1 -1 6165 6104 2287 107 3 0 chr2 57236489 57236788 -193451066 - AluSx SINE Alu -12 300 1 1702 178 60 35 chr2 57236788 57237121 -193450733 - L1ME1 LINE L1 -62 6104 5758 853 142 15 0 chr2 57237902 57238081 -193449773 + FRAM SINE Alu 11 191 0 396 226 0 32 chr2 57238486 57238579 -193449275 - Tigger7 DNA MER2_type 0 2487 2398 * 3256 147 87 9 chr2 57238576 57239115 -193448739 - Tigger7 DNA MER2_type -150 583 3 1880 153 3 7 chr2 57239656 57239943 -193447911 - AluSx SINE Alu -26 286 1 743 131 0 19 chr2 57239945 57240052 -193447802 - AluSq/x SINE Alu -175 138 34 24 0 0 0 chr2 57240073 57240097 -193447757 + AT_rich Low_complexity Low_complexity 1 24 0 2358 98 0 0 chr2 57240438 57240735 -193447119 + AluSq SINE Alu 1 297 -16 5459 119 10 2 chr2 57241034 57241919 -193445935 - L1PA13 LINE L1 -16 6147 5256 943 172 19 0 chr2 57242541 57242698 -193445156 - AluJb SINE Alu -16 296 137 465 211 67 10 chr2 57243283 57243387 -193444467 - MIR SINE MIR 0 262 153 21 36 0 0 chr2 57244023 57244051 -193443803 + AT_rich Low_complexity Low_complexity 1 28 0 240 86 0 0 chr2 57244273 57244308 -193443546 + (CA)n Simple_repeat Simple_repeat 1 35 0 401 286 94 38 chr2 57244341 57244554 -193443300 - L1MC4a LINE L1 -1888 5920 5696 596 260 114 32 chr2 57244567 57245399 -193442455 - L1MC4a LINE L1 -578 5664 4757 1203 188 100 8 chr2 57245585 57245728 -193442126 - AluJb SINE Alu -16 296 168 261 0 0 0 chr2 57245728 57245757 -193442097 + (TG)n Simple_repeat Simple_repeat 2 30 0 297 0 0 0 chr2 57245762 57245795 -193442059 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1203 188 100 8 chr2 57245795 57245895 -193441959 - AluJb SINE Alu -147 165 24 1199 137 21 4 chr2 57245895 57246129 -193441725 - L1MC3 LINE L1 -6 7779 7542 1918 159 10 3 chr2 57246185 57246493 -193441361 + AluSx SINE Alu 1 310 -2 303 305 21 40 chr2 57246502 57246830 -193441024 - L1MC4a LINE L1 -1590 4556 4235 303 320 7 7 chr2 57246885 57247032 -193440822 - L1MC4a LINE L1 -2005 4141 3995 1038 309 75 65 chr2 57247047 57247174 -193440680 - L1MC4a LINE L1 -2324 3822 3698 225 0 0 0 chr2 57247174 57247199 -193440655 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2103 120 0 0 chr2 57247201 57247476 -193440378 - AluSg SINE Alu -35 275 1 1038 309 75 65 chr2 57247476 57247722 -193440132 - L1MC4a LINE L1 -2448 3698 3456 1814 187 0 10 chr2 57247722 57248016 -193439838 - AluJo SINE Alu -20 292 2 1038 309 75 65 chr2 57248016 57248139 -193439715 - L1MC4a LINE L1 -2690 3456 3336 2368 91 3 0 chr2 57248139 57248436 -193439418 + AluSg SINE Alu 1 298 -12 1038 309 75 65 chr2 57248436 57248960 -193438894 - L1MC4a LINE L1 -2810 3336 2787 263 246 79 18 chr2 57249054 57249168 -193438686 - MLT1L LTR MaLR -6 609 489 294 277 28 40 chr2 57249246 57249423 -193438431 - L1MC5 LINE L1 -54 7907 7733 879 260 167 16 chr2 57249616 57250066 -193437788 - HAL1 LINE L1 -604 1903 1386 872 143 0 0 chr2 57250186 57250319 -193437535 - AluSq/x SINE Alu -179 133 1 585 211 173 87 chr2 57250324 57250544 -193437310 - HAL1 LINE L1 -1314 1193 941 2331 95 0 3 chr2 57250544 57250840 -193437014 - AluSx SINE Alu -17 295 1 585 211 173 87 chr2 57250840 57250908 -193436946 - HAL1 LINE L1 -1566 941 880 305 286 35 76 chr2 57251136 57251265 -193436589 - HAL1 LINE L1 -2211 296 174 1995 164 0 0 chr2 57251265 57251569 -193436285 - AluJo SINE Alu -8 304 1 305 286 35 76 chr2 57251569 57251610 -193436244 - HAL1 LINE L1 -2333 174 133 292 229 83 49 chr2 57251622 57251766 -193436088 - MLT1L LTR MaLR 0 615 467 284 290 0 0 chr2 57251905 57251974 -193435880 - MLT1J LTR MaLR -334 177 109 366 250 12 0 chr2 57252150 57252234 -193435620 + MIR SINE MIR 177 261 -1 445 257 44 7 chr2 57252289 57252425 -193435429 - L2 LINE L2 -1000 2314 2174 337 23 0 0 chr2 57252663 57252706 -193435148 - MADE1 DNA Mariner -37 43 1 928 160 7 0 chr2 57252716 57252860 -193434994 + AluJb SINE Alu 3 147 -165 640 271 72 25 chr2 57253475 57253711 -193434143 + L3 LINE CR1 1071 1317 -260 883 188 5 46 chr2 57253855 57254052 -193433802 + MER58A DNA MER1_type 36 224 0 293 253 66 33 chr2 57254071 57254154 -193433700 + L3 LINE CR1 1481 1569 -8 1973 147 0 3 chr2 57254154 57254466 -193433388 - AluSx SINE Alu -1 311 1 2571 58 0 0 chr2 57254476 57254784 -193433070 - AluY SINE Alu -2 309 2 3294 147 10 32 chr2 57255636 57255860 -193431994 - L1MC2 LINE L1 -5 6339 6112 1839 166 7 23 chr2 57255860 57256168 -193431686 - AluJo SINE Alu -9 303 1 3294 147 10 32 chr2 57256168 57256571 -193431283 - L1MC2 LINE L1 -232 6112 5726 699 197 8 0 chr2 57256584 57256706 -193431148 - FLAM_A SINE Alu -10 123 1 26 64 0 0 chr2 57256745 57256792 -193431062 + AT_rich Low_complexity Low_complexity 1 47 0 9058 161 32 37 chr2 57256800 57257338 -193430516 - L1 LINE L1 -1083 5063 4524 2442 85 0 3 chr2 57257338 57257644 -193430210 - AluY SINE Alu -6 305 1 9058 161 32 37 chr2 57257644 57259155 -193428699 - L1 LINE L1 -1622 4524 3024 1411 128 179 15 chr2 57259160 57259433 -193428421 + MER1B DNA MER1_type 1 318 -21 1566 158 16 158 chr2 57259433 57259946 -193427908 - L1 LINE L1 -3120 3026 2587 2768 75 22 0 chr2 57260013 57260375 -193427479 - L1PA10 LINE L1 -11 6157 5788 2074 121 0 10 chr2 57260416 57260713 -193427141 - AluSx SINE Alu -18 294 1 29 0 0 0 chr2 57260721 57260750 -193427104 + AT_rich Low_complexity Low_complexity 1 29 0 374 294 93 32 chr2 57261023 57261271 -193426583 - L1ME4a LINE L1 -171 5950 5688 758 245 124 58 chr2 57261291 57261638 -193426216 - L2 LINE L2 -1 3312 2943 406 214 51 0 chr2 57261657 57261755 -193426099 + MER97a DNA MER1_type? 21 123 -771 2002 138 0 49 chr2 57261760 57262086 -193425768 - AluSx SINE Alu -2 310 1 805 163 0 0 chr2 57262126 57262249 -193425605 - FLAM_C SINE Alu -19 124 2 313 89 0 0 chr2 57262250 57262295 -193425559 + MER97b DNA MER1_type? 112 156 -897 951 104 0 15 chr2 57263117 57263252 -193424602 - FLAM_C SINE Alu 0 133 1 246 224 179 22 chr2 57263959 57264093 -193423761 - MLT1L LTR MaLR -221 394 240 443 205 24 0 chr2 57264227 57264310 -193423544 + L2 LINE L2 3153 3237 -35 271 318 249 42 chr2 57264345 57264634 -193423220 - L2 LINE L2 -337 2977 2629 794 258 33 0 chr2 57264715 57264897 -193422957 + MER5A DNA MER1_type 1 188 -1 558 198 12 87 chr2 57264964 57265136 -193422718 + MER5B DNA MER1_type 20 178 0 27 0 0 0 chr2 57265281 57265308 -193422546 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr2 57265628 57265656 -193422198 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr2 57265693 57265726 -193422128 + AT_rich Low_complexity Low_complexity 1 33 0 773 132 0 47 chr2 57266228 57266357 -193421497 + MER5A DNA MER1_type 15 137 -52 1521 179 41 7 chr2 57266428 57266544 -193421310 + AluJb SINE Alu 1 112 -200 210 37 0 0 chr2 57266544 57266571 -193421283 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1521 179 41 7 chr2 57266571 57266744 -193421110 + AluJb SINE Alu 112 300 -12 422 281 21 0 chr2 57266826 57266922 -193420932 - MER5A DNA MER1_type -83 106 9 2054 122 0 3 chr2 57267317 57267612 -193420242 + AluSq SINE Alu 1 294 -19 321 288 88 24 chr2 57267616 57267741 -193420113 - L2 LINE L2 -6 3307 3175 3295 79 2 11 chr2 57268434 57268903 -193418951 - L1PA8 LINE L1 0 6172 5708 245 222 0 0 chr2 57269148 57269193 -193418661 - L3 LINE CR1 -7 1570 1526 360 153 0 0 chr2 57269195 57269280 -193418574 + CT-rich Low_complexity Low_complexity 2 86 0 342 0 0 0 chr2 57269280 57269318 -193418536 + (CA)n Simple_repeat Simple_repeat 1 38 0 416 262 68 0 chr2 57270010 57270113 -193417741 - L2 LINE L2 0 3313 3204 22 35 0 0 chr2 57270656 57270685 -193417169 + AT_rich Low_complexity Low_complexity 1 29 0 362 138 17 0 chr2 57270690 57270748 -193417106 - U7 snRNA snRNA 0 63 5 544 307 17 17 chr2 57270931 57271107 -193416747 - L3 LINE CR1 -802 775 600 237 289 38 19 chr2 57271344 57271503 -193416351 + L1MC5 LINE L1 7613 7774 -187 2006 122 3 7 chr2 57271887 57272220 -193415634 + AluSx SINE Alu 1 332 0 510 179 120 26 chr2 57273202 57273319 -193414535 - FLAM_C SINE Alu -5 128 1 22 70 0 0 chr2 57273472 57273515 -193414339 + AT_rich Low_complexity Low_complexity 1 43 0 479 288 116 55 chr2 57273525 57273852 -193414002 - HAL1 LINE L1 -37 2470 2124 2111 130 0 0 chr2 57273898 57274197 -193413657 - AluSx SINE Alu -13 299 1 1814 167 3 17 chr2 57275676 57275976 -193411878 + AluJo SINE Alu 1 296 -16 17092 51 9 3 chr2 57276351 57279362 -193408492 - L1PA5 LINE L1 -3 6151 3066 348 151 0 10 chr2 57279362 57279433 -193408421 - Alu SINE Alu -252 48 1 1306 260 79 24 chr2 57279460 57279554 -193408300 + MLT1J LTR MaLR 1 88 -423 1891 185 31 8 chr2 57279554 57279911 -193407943 + MLT1A1 LTR MaLR 1 365 0 1306 260 79 24 chr2 57279911 57280232 -193407622 + MLT1J LTR MaLR 88 439 -72 883 278 55 11 chr2 57280516 57280789 -193407065 + LTR16A LTR ERVL 166 450 0 1566 252 99 4 chr2 57280842 57281315 -193406539 + LTR33 LTR ERVL 3 520 -1 2254 106 0 7 chr2 57281321 57281624 -193406230 - AluSx SINE Alu -11 301 1 1615 136 0 4 chr2 57281638 57281874 -193405980 - AluSg/x SINE Alu -1 309 75 1405 165 0 4 chr2 57282629 57282865 -193404989 - MLT1A1 LTR MaLR 0 365 131 3146 174 78 87 chr2 57282913 57283114 -193404740 - MER21B LTR ERV1 -14 849 648 3940 82 26 2 chr2 57283114 57283654 -193404200 - MER41A LTR ERV1 -1 553 1 3146 174 78 87 chr2 57283654 57284296 -193403558 - MER21B LTR ERV1 -215 648 13 1911 166 3 3 chr2 57284301 57284597 -193403257 - AluJb SINE Alu -16 296 1 809 167 0 0 chr2 57284622 57284760 -193403094 - MLT1A1 LTR MaLR -227 138 1 432 251 157 25 chr2 57284818 57285053 -193402801 - L2 LINE L2 0 3313 3048 338 247 141 0 chr2 57285406 57285491 -193402363 - L2 LINE L2 -5 3308 3212 2157 111 0 0 chr2 57285790 57286079 -193401775 - AluSg SINE Alu 0 310 22 1536 197 22 7 chr2 57286104 57286378 -193401476 - AluJb SINE Alu -32 280 3 1086 180 84 62 chr2 57286776 57287131 -193400723 - Zaphod DNA AcHobo -49 3982 3620 1033 162 0 0 chr2 57287139 57287293 -193400561 + AluJb SINE Alu 148 301 -11 1537 227 89 29 chr2 57287341 57288185 -193399669 - Zaphod DNA AcHobo -3061 970 9 1685 92 0 9 chr2 57288588 57288817 -193399037 - AluSg/x SINE Alu -12 297 71 273 321 27 0 chr2 57288890 57289002 -193398852 + MLT1L LTR MaLR 140 254 -361 273 321 98 45 chr2 57289027 57289273 -193398581 + MLT1L LTR MaLR 344 602 -13 308 280 90 33 chr2 57289686 57289897 -193397957 + L1ME4a LINE L1 5256 5478 -2330 457 103 10 62 chr2 57289904 57290001 -193397853 + L1MB5 LINE L1 6083 6174 0 373 303 55 37 chr2 57290032 57290243 -193397611 + L1ME4a LINE L1 5487 5693 -428 192 77 0 0 chr2 57290243 57290269 -193397585 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2280 92 0 0 chr2 57290273 57290556 -193397298 - AluSq SINE Alu -30 283 1 373 303 55 37 chr2 57290556 57290666 -193397188 + L1ME4a LINE L1 5695 5819 -302 944 210 112 66 chr2 57291526 57291892 -193395962 + MSTD LTR MaLR 7 389 -7 314 253 114 69 chr2 57292136 57292338 -193395516 + L1ME4a LINE L1 5817 6027 -94 402 122 104 17 chr2 57292428 57292519 -193395335 + MER5A DNA MER1_type 4 104 -85 380 217 258 35 chr2 57292592 57292790 -193395064 + L2 LINE L2 1459 1700 -1614 4557 186 15 41 chr2 57292799 57294013 -193393841 - L1MA9 LINE L1 -38 6274 5093 2043 243 174 67 chr2 57294014 57295162 -193392692 + L2 LINE L2 1688 2958 -356 1102 215 32 16 chr2 57295183 57295430 -193392424 + MIR SINE MIR 12 262 0 424 254 214 85 chr2 57295438 57295733 -193392121 + L2 LINE L2 2977 3309 -4 23 0 0 0 chr2 57296120 57296143 -193391711 + AT_rich Low_complexity Low_complexity 1 23 0 1942 99 88 25 chr2 57296411 57296764 -193391090 - THE1C LTR MaLR 0 375 1 350 362 68 10 chr2 57297006 57297213 -193390641 - MIR SINE MIR -10 252 34 2235 113 0 3 chr2 57297781 57298083 -193389771 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 57298297 57298318 -193389536 + AT_rich Low_complexity Low_complexity 1 21 0 407 210 183 64 chr2 57299151 57299370 -193388484 - MLT1J LTR MaLR -26 485 241 2335 122 0 0 chr2 57299538 57299849 -193388005 - AluSx SINE Alu -1 311 1 695 156 0 104 chr2 57299955 57300109 -193387745 - AluJb SINE Alu -19 293 156 206 235 20 20 chr2 57300288 57300339 -193387515 - L2 LINE L2 -7 3306 3256 974 172 64 5 chr2 57300341 57300544 -193387310 - MER20 DNA MER1_type -1 218 4 240 236 29 20 chr2 57300683 57300843 -193387011 - MIR SINE MIR -30 232 110 440 268 70 84 chr2 57300844 57301131 -193386723 - LTR16C LTR ERVL 0 491 209 708 285 109 68 chr2 57301171 57301644 -193386210 - L2 LINE L2 -71 3242 2790 189 0 0 0 chr2 57301644 57301665 -193386189 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 708 285 109 68 chr2 57301665 57301686 -193386168 - L2 LINE L2 -523 2790 2771 594 0 0 0 chr2 57301686 57301752 -193386102 + (TATTG)n Simple_repeat Simple_repeat 2 67 0 1849 115 25 7 chr2 57301752 57302030 -193385824 - AluSq SINE Alu -28 285 3 708 285 109 68 chr2 57302030 57302141 -193385713 - L2 LINE L2 -542 2771 2666 4661 181 32 66 chr2 57302141 57303218 -193384636 - MER45B DNA AcHobo 0 1040 1 708 285 109 68 chr2 57303218 57303472 -193384382 - L2 LINE L2 -647 2666 2330 464 283 43 22 chr2 57303415 57303553 -193384301 - MIR SINE MIR -121 141 1 * 328 345 36 0 chr2 57303845 57303955 -193383899 + MIR SINE MIR 34 147 -115 183 222 0 0 chr2 57303978 57304023 -193383831 + (TA)n Simple_repeat Simple_repeat 2 46 0 4319 169 65 25 chr2 57304112 57304825 -193383029 - L1MB7 LINE L1 -159 6025 5342 2472 68 0 0 chr2 57304825 57305120 -193382734 - AluY SINE Alu -16 295 1 4319 169 65 25 chr2 57305120 57305298 -193382556 - L1MB7 LINE L1 -842 5342 5173 1944 126 14 0 chr2 57305298 57305745 -193382109 - AluSx SINE Alu 0 451 1 4319 169 65 25 chr2 57305745 57305880 -193381974 - L1MB7 LINE L1 -1011 5173 4918 1770 102 26 30 chr2 57305880 57306145 -193381709 - AluSx SINE Alu -48 264 1 2186 123 0 0 chr2 57306145 57306445 -193381409 - AluSx SINE Alu -11 301 1 604 185 118 0 chr2 57306454 57306573 -193381281 - FLAM_A SINE Alu 0 133 1 3899 206 23 7 chr2 57306574 57307503 -193380351 - L1MB7 LINE L1 -1374 4772 3829 532 283 83 72 chr2 57307533 57307617 -193380237 - HAL1b LINE L1 -739 1612 1530 1204 92 88 83 chr2 57307617 57307705 -193380149 - MER30 DNA MER1_type -1 229 143 2082 95 14 14 chr2 57307705 57308018 -193379836 - AluSg SINE Alu 0 313 1 1204 92 88 83 chr2 57308018 57308156 -193379698 - MER30 DNA MER1_type -87 143 1 532 283 83 72 chr2 57308156 57308624 -193379230 - HAL1b LINE L1 -821 1530 228 256 114 91 0 chr2 57310702 57310746 -193377108 - MLT2C2 LTR ERVL 0 414 367 278 231 0 9 chr2 57310747 57310855 -193376999 + (TA)n Simple_repeat Simple_repeat 2 108 0 507 33 0 0 chr2 57310894 57310955 -193376899 + (TG)n Simple_repeat Simple_repeat 2 62 0 2158 155 72 5 chr2 57310968 57311343 -193376511 - MLT2C2 LTR ERVL -64 400 1 25 0 0 0 chr2 57312928 57312953 -193374901 + AT_rich Low_complexity Low_complexity 1 25 0 2319 104 3 0 chr2 57313608 57313917 -193373937 + AluSq SINE Alu 1 310 -3 21 89 0 0 chr2 57314896 57314952 -193372902 + AT_rich Low_complexity Low_complexity 1 56 0 22 0 0 0 chr2 57315351 57315373 -193372481 + AT_rich Low_complexity Low_complexity 1 22 0 186 167 0 0 chr2 57315650 57315686 -193372168 + CT-rich Low_complexity Low_complexity 2 37 0 242 250 47 31 chr2 57315748 57315812 -193372042 + L2 LINE L2 3207 3271 -1 6725 186 7 32 chr2 57316691 57317528 -193370326 - L1PA15 LINE L1 -3 6162 5306 1486 171 52 39 chr2 57317528 57317814 -193370040 - AluJb SINE Alu -22 290 1 6725 186 7 32 chr2 57317814 57319203 -193368651 - L1PA15 LINE L1 -859 5306 3952 392 249 104 62 chr2 57319249 57319558 -193368296 - L1ME4a LINE L1 -18 6103 5782 308 261 98 66 chr2 57319931 57320297 -193367557 - L1ME4a LINE L1 -1299 4847 4453 2062 142 3 0 chr2 57320297 57320585 -193367269 - AluSx SINE Alu -17 295 7 308 261 98 66 chr2 57320585 57320807 -193367047 - L1ME4a LINE L1 -1693 4453 4240 397 223 207 0 chr2 57320959 57321080 -193366774 + MER3 DNA MER1_type 1 146 -63 1878 144 0 20 chr2 57321116 57321414 -193366440 - AluJb SINE Alu -7 305 14 22 0 0 0 chr2 57322271 57322293 -193365561 + AT_rich Low_complexity Low_complexity 1 22 0 237 268 50 62 chr2 57322312 57322491 -193365363 - MLT1L LTR MaLR 0 615 439 286 276 75 75 chr2 57322563 57322777 -193365077 - MLT1J LTR MaLR -289 222 9 257 360 14 14 chr2 57323116 57323255 -193364599 - L2 LINE L2 -459 2855 2717 1357 98 0 0 chr2 57323373 57323547 -193364307 - AluSx SINE Alu -12 300 127 534 133 0 0 chr2 57323547 57323637 -193364217 + (TG)n Simple_repeat Simple_repeat 2 91 0 216 0 0 0 chr2 57323637 57323661 -193364193 + (TA)n Simple_repeat Simple_repeat 2 25 0 830 152 8 0 chr2 57323663 57323795 -193364059 - AluSx SINE Alu -180 133 1 416 202 16 114 chr2 57324879 57325087 -193362767 + MLT1H LTR MaLR 410 547 -2 2140 132 0 3 chr2 57325272 57325576 -193362278 - AluSx SINE Alu -9 303 1 268 178 0 0 chr2 57325779 57325824 -193362030 - L2 LINE L2 -7 3306 3262 473 285 7 40 chr2 57325833 57325984 -193361870 - MIR SINE MIR -111 151 6 2180 126 0 0 chr2 57326022 57326324 -193361530 + AluSx SINE Alu 1 302 -10 22 56 0 0 chr2 57327654 57327690 -193360164 + AT_rich Low_complexity Low_complexity 1 36 0 2986 181 46 20 chr2 57327893 57328501 -193359353 - LTR27 LTR ERV1 0 636 13 232 343 49 29 chr2 57328869 57328971 -193358883 - L2 LINE L2 -30 3242 3139 1828 94 68 8 chr2 57331125 57331391 -193356463 + AluSc SINE Alu 12 293 -16 630 327 148 0 chr2 57332078 57332301 -193355553 - MIR SINE MIR -3 259 4 233 234 16 31 chr2 57332443 57332507 -193355347 + A-rich Low_complexity Low_complexity 4 66 0 5226 79 15 42 chr2 57333669 57334100 -193353754 + MER4E LTR ERV1 1 442 -324 2144 98 3 31 chr2 57334100 57334417 -193353437 - AluSp SINE Alu -2 311 4 5226 79 15 42 chr2 57334417 57334572 -193353282 + MER4E LTR ERV1 442 600 -166 2485 83 0 3 chr2 57334572 57334886 -193352968 - AluSq SINE Alu 0 313 1 5226 79 15 42 chr2 57334886 57335085 -193352769 + MER4E LTR ERV1 600 766 0 205 299 103 22 chr2 57335231 57335371 -193352483 + MIR SINE MIR 3 151 -71 248 266 47 0 chr2 57335621 57335685 -193352169 - MIR SINE MIR -34 228 162 233 262 0 16 chr2 57336168 57336229 -193351625 - MLT1L LTR MaLR -409 206 147 569 236 48 52 chr2 57336308 57336336 -193351518 - L1MCa LINE L1 -2062 4364 4337 1913 137 58 30 chr2 57336336 57336700 -193351154 - THE1C LTR MaLR -1 374 1 569 236 48 52 chr2 57336700 57336921 -193350933 - L1MCa LINE L1 -2089 4337 4116 * 606 192 34 27 chr2 57336913 57336927 -193350927 - L1MA10 LINE L1 0 6334 6321 515 261 9 66 chr2 57336927 57337060 -193350794 - L1ME1 LINE L1 -9 6157 6041 1785 127 40 37 chr2 57337060 57337360 -193350494 - AluJb SINE Alu -11 301 1 515 261 9 66 chr2 57337360 57337452 -193350402 - L1ME1 LINE L1 -125 6041 5945 1674 263 68 76 chr2 57337458 57337553 -193350301 - L1MCa LINE L1 -2286 4140 4046 8836 107 12 2 chr2 57337553 57338838 -193349016 - HSMAR2 DNA Mariner -2 1300 3 1674 263 68 76 chr2 57338838 57339092 -193348762 - L1MCa LINE L1 -2380 4046 3792 2311 67 0 7 chr2 57339092 57339404 -193348450 - AluY SINE Alu 0 310 1 1674 263 68 76 chr2 57339404 57339857 -193347997 - L1MCa LINE L1 -2634 3792 3337 870 109 0 36 chr2 57339857 57339995 -193347859 - FLAM_C SINE Alu 0 133 1 1674 263 68 76 chr2 57339995 57340666 -193347188 - L1MCa LINE L1 -3089 3337 2675 1904 151 66 3 chr2 57340666 57340984 -193346870 - MER2 DNA MER2_type 0 345 8 455 285 102 11 chr2 57341233 57341615 -193346239 - L1MCa LINE L1 -4746 1680 1264 1376 272 40 58 chr2 57341645 57342163 -193345691 + L2 LINE L2 2805 3313 0 25 0 0 0 chr2 57342434 57342459 -193345395 + AT_rich Low_complexity Low_complexity 1 25 0 206 284 142 52 chr2 57344472 57344606 -193343248 + MIR3 SINE MIR 1 146 -62 2192 114 0 3 chr2 57345485 57345782 -193342072 + AluSx SINE Alu 1 296 -16 1572 139 39 139 chr2 57346282 57346669 -193341185 + MER7A DNA MER2_type 1 346 0 1714 155 41 0 chr2 57346935 57347226 -193340628 - MER7A DNA MER2_type -11 335 35 906 96 0 0 chr2 57347226 57347379 -193340475 - AluSg/x SINE Alu 0 321 169 1592 120 0 22 chr2 57347384 57347609 -193340245 - AluSx SINE Alu -72 240 21 417 341 30 5 chr2 57347730 57347936 -193339918 - L1M4 LINE L1 -1054 5092 4882 2005 112 0 0 chr2 57347943 57348234 -193339620 - AluSx SINE Alu 0 313 23 293 87 0 43 chr2 57348236 57348282 -193339572 - AluSx SINE Alu -254 45 2 365 313 67 31 chr2 57348313 57348508 -193339346 - L1M4 LINE L1 -1302 4844 4643 5850 133 30 7 chr2 57348508 57349981 -193337873 - L1MA5A LINE L1 -4 6293 4783 699 316 97 24 chr2 57350042 57350643 -193337211 - L1M4 LINE L1 -1537 4609 3964 22 0 0 0 chr2 57351326 57351348 -193336506 + AT_rich Low_complexity Low_complexity 1 22 0 598 291 67 18 chr2 57351547 57351770 -193336084 + MIR SINE MIR 27 260 -2 302 333 57 19 chr2 57352161 57352266 -193335588 - L2 LINE L2 -19 3253 3145 429 282 77 50 chr2 57352278 57352459 -193335395 + L2 LINE L2 3017 3202 -70 287 312 138 27 chr2 57352606 57352911 -193334943 - L2 LINE L2 -212 3060 2716 698 58 0 0 chr2 57353118 57353205 -193334649 + AluY SINE Alu 211 297 -14 1919 132 26 19 chr2 57353415 57353725 -193334129 + AluJo SINE Alu 1 312 0 1818 84 81 4 chr2 57353952 57354213 -193333641 + AluSg SINE Alu 1 281 -29 1565 255 55 38 chr2 57355165 57355348 -193332506 - L1ME3A LINE L1 -7 6155 5977 1515 182 125 83 chr2 57355348 57355843 -193332011 + LTR40a LTR ERVL 1 516 -3 1565 255 55 38 chr2 57355843 57356316 -193331538 - L1ME3A LINE L1 -185 5977 5472 1997 62 0 4 chr2 57356426 57356670 -193331184 + AluY SINE Alu 53 295 -16 1145 114 0 0 chr2 57356728 57356877 -193330977 + AluSg SINE Alu 44 192 -118 646 246 87 72 chr2 57360049 57360396 -193327458 - L1ME LINE L1 -649 5515 5175 1763 138 43 3 chr2 57360396 57360552 -193327302 - AluSq SINE Alu -20 293 120 226 0 59 0 chr2 57360552 57360586 -193327268 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 1763 138 43 3 chr2 57360586 57360711 -193327143 - AluSq SINE Alu -193 120 1 646 246 87 72 chr2 57360711 57360838 -193327016 - L1ME LINE L1 -989 5175 5051 823 132 0 37 chr2 57360838 57360974 -193326880 + FLAM_C SINE Alu 3 133 0 646 246 87 72 chr2 57360974 57361121 -193326733 - L1ME LINE L1 -1113 5051 4887 337 288 137 7 chr2 57361121 57361260 -193326594 - MLT1I LTR MaLR -225 184 28 444 305 21 21 chr2 57361466 57361705 -193326149 + L1M4 LINE L1 3329 3567 -2579 1578 253 93 13 chr2 57361745 57362515 -193325339 - L2 LINE L2 0 3313 2486 752 244 114 36 chr2 57362516 57362823 -193325031 - MSTD LTR MaLR -2 394 64 4530 225 121 86 chr2 57362823 57364740 -193323114 - L2 LINE L2 -823 2491 508 216 291 13 13 chr2 57365111 57365190 -193322664 + GA-rich Low_complexity Low_complexity 4 82 0 1457 182 10 34 chr2 57366682 57366793 -193321061 + AluJo SINE Alu 1 113 -199 2434 123 73 0 chr2 57366793 57367192 -193320662 - MSTA LTR MaLR 0 428 1 1457 182 10 34 chr2 57367192 57367376 -193320478 + AluJo SINE Alu 113 289 -23 210 299 104 13 chr2 57367686 57367763 -193320091 - L2 LINE L2 -19 3253 3170 1509 81 27 5 chr2 57367764 57367986 -193319868 - LTR12 LTR ERV1 -8 706 480 295 260 10 0 chr2 57367986 57368090 -193319764 - LTR30 LTR ERV1 -79 643 539 336 78 20 0 chr2 57368090 57368141 -193319713 - LTR12 LTR ERV1 -442 272 221 * 662 56 11 0 chr2 57368131 57368221 -193319633 - LTR12 LTR ERV1 -623 91 1 429 319 92 39 chr2 57368513 57368849 -193319005 + L1MC4 LINE L1 7689 8042 0 2336 111 16 30 chr2 57368873 57369242 -193318612 - THE1B LTR MaLR 0 364 1 299 226 108 29 chr2 57369326 57369428 -193318426 + MIR SINE MIR 84 193 -69 626 249 125 0 chr2 57369444 57369645 -193318209 + MIR SINE MIR 39 262 0 281 208 30 20 chr2 57369670 57369771 -193318083 + L1 LINE L1 2664 2765 -3381 280 282 34 8 chr2 57369830 57369947 -193317907 + L1 LINE L1 2877 2996 -3150 240 283 43 0 chr2 57369947 57370039 -193317815 + L1 LINE L1 3707 3802 -2344 348 237 11 32 chr2 57370177 57370270 -193317584 - MIR SINE MIR -62 200 110 189 0 0 0 chr2 57370297 57370318 -193317536 + (TAGA)n Simple_repeat Simple_repeat 2 22 0 2531 51 0 13 chr2 57370337 57370652 -193317202 - AluY SINE Alu 0 311 1 267 310 71 18 chr2 57370652 57370765 -193317089 - MIR SINE MIR -141 121 3 182 154 26 0 chr2 57370950 57370989 -193316865 + MIR SINE MIR 209 248 -14 1735 131 28 31 chr2 57372263 57372553 -193315301 + AluJb SINE Alu 1 289 -23 416 315 33 43 chr2 57372642 57372826 -193315028 - MIR SINE MIR -19 243 62 867 163 0 7 chr2 57372856 57372991 -193314863 - AluJo SINE Alu -178 134 1 925 199 11 22 chr2 57374200 57374381 -193313473 + AluJb SINE Alu 132 310 -2 1733 171 53 115 chr2 57374822 57375447 -193312407 + LTR8A LTR ERV1 100 685 -42 249 329 42 35 chr2 57375797 57375940 -193311914 - MIR SINE MIR -12 250 107 238 169 0 102 chr2 57376483 57376542 -193311312 + L2 LINE L2 3261 3313 0 1882 151 10 3 chr2 57377206 57377505 -193310349 - AluSx SINE Alu -11 301 1 2099 126 56 34 chr2 57377765 57378121 -193309733 - THE1B LTR MaLR 0 364 1 1681 142 66 11 chr2 57378122 57378396 -193309458 + AluJb SINE Alu 23 311 -1 437 0 19 0 chr2 57380359 57380412 -193307442 + (CA)n Simple_repeat Simple_repeat 1 54 0 548 282 77 25 chr2 57380598 57380921 -193306933 - L1ME4a LINE L1 -180 5941 5602 2285 103 0 0 chr2 57381139 57381430 -193306424 + AluSg SINE Alu 1 291 -19 207 88 0 0 chr2 57381707 57381741 -193306113 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 2082 83 7 4 chr2 57381741 57382019 -193305835 - AluY SINE Alu -32 279 1 271 343 14 7 chr2 57382204 57382350 -193305504 + MER117 DNA MER1_type 12 158 -39 21 0 0 0 chr2 57382544 57382565 -193305289 + AT_rich Low_complexity Low_complexity 1 21 0 268 316 21 77 chr2 57382886 57382939 -193304915 - MIR3 SINE MIR -3 205 151 900 205 0 132 chr2 57382939 57383197 -193304657 + MER58A DNA MER1_type 1 224 0 268 316 21 77 chr2 57383197 57383331 -193304523 - MIR3 SINE MIR -57 151 31 321 375 75 0 chr2 57383537 57383657 -193304197 + L2 LINE L2 3137 3265 -7 519 331 179 8 chr2 57384187 57384589 -193303265 - L2 LINE L2 -1112 2202 1732 290 272 44 26 chr2 57384727 57384841 -193303013 + MIR SINE MIR 104 219 -43 520 234 21 21 chr2 57387123 57387264 -193300590 - MIR SINE MIR -6 256 116 269 255 19 10 chr2 57387401 57387513 -193300341 + L1ME LINE L1 5711 5824 -297 1997 88 15 0 chr2 57387559 57387820 -193300034 + AluSx SINE Alu 1 265 -47 294 280 40 0 chr2 57387991 57388116 -193299738 - MER117 DNA MER1_type -60 137 8 1096 271 200 32 chr2 57388293 57388659 -193299195 + L2 LINE L2 1615 1918 -1396 1905 181 28 3 chr2 57388659 57389013 -193298841 - MLT1A1 LTR MaLR -2 363 1 1096 271 200 32 chr2 57389013 57389296 -193298558 + L2 LINE L2 1918 2373 -941 1101 259 88 52 chr2 57389296 57389716 -193298138 + MLT1J LTR MaLR 1 435 -76 988 114 0 0 chr2 57389716 57389856 -193297998 - MER47B DNA MER2_type 0 418 279 351 148 0 0 chr2 57389872 57389926 -193297928 + AluJ/FLAM SINE Alu 37 90 -212 * 1162 204 56 0 chr2 57389925 57390156 -193297698 - MER47B DNA MER2_type -154 264 21 1249 180 34 112 chr2 57390784 57391167 -193296687 - MLT1A1 LTR MaLR -12 353 1 680 255 86 56 chr2 57391167 57391623 -193296231 + MLT1H1 LTR MaLR 52 569 -26 660 289 134 18 chr2 57394688 57395031 -193292823 + L2 LINE L2 1740 2122 -1192 700 137 0 96 chr2 57395746 57395892 -193291962 - FLAM_C SINE Alu 0 143 12 679 200 9 56 chr2 57395947 57396002 -193291852 + LTR37A LTR ERV1 197 253 -215 1294 185 42 6 chr2 57396002 57396315 -193291539 + MER33 DNA MER1_type 1 324 0 679 200 9 56 chr2 57396315 57396393 -193291461 + LTR37A LTR ERV1 253 333 -135 270 0 0 0 chr2 57396393 57396423 -193291431 + (CA)n Simple_repeat Simple_repeat 2 31 0 679 200 9 56 chr2 57396423 57396555 -193291299 + LTR37A LTR ERV1 333 449 -19 277 175 62 25 chr2 57396638 57396718 -193291136 + LTR33A LTR ERVL 440 522 -1 764 243 114 0 chr2 57396735 57396945 -193290909 - MIR SINE MIR -17 245 12 357 266 62 9 chr2 57397357 57397470 -193290384 - MIR SINE MIR -26 236 118 1810 169 3 23 chr2 57398343 57398651 -193289203 + AluJo SINE Alu 1 302 -10 407 276 6 83 chr2 57399394 57399476 -193288378 - L2 LINE L2 -12 3301 3239 1997 138 7 0 chr2 57399476 57399773 -193288081 - AluSx SINE Alu -13 299 1 407 276 6 83 chr2 57399773 57399871 -193287983 - L2 LINE L2 -74 3239 3135 203 138 0 0 chr2 57400701 57400730 -193287124 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 1783 181 3 19 chr2 57400927 57401242 -193286612 + AluJo SINE Alu 1 310 -2 304 320 141 27 chr2 57401347 57401644 -193286210 + L1M4 LINE L1 4256 4586 -1560 265 317 0 10 chr2 57401813 57401917 -193285937 + L1M4 LINE L1 4741 4843 -1303 804 242 125 30 chr2 57402095 57402430 -193285424 + HAL1 LINE L1 13 379 -2128 1961 126 7 17 chr2 57402483 57402776 -193285078 - AluSx SINE Alu -22 290 1 572 324 62 0 chr2 57402792 57403002 -193284852 + HAL1 LINE L1 499 721 -1786 2332 110 3 0 chr2 57403035 57403344 -193284510 + AluSg SINE Alu 1 310 0 350 323 122 28 chr2 57403562 57403989 -193283865 + L2 LINE L2 1183 1649 -1665 1485 259 24 22 chr2 57404023 57404437 -193283417 + LTR16A LTR ERVL 25 439 -11 585 292 32 39 chr2 57404478 57404762 -193283092 - L1MC/D LINE L1 -2214 5594 5313 228 330 127 29 chr2 57405029 57405305 -193282549 + L2 LINE L2 3003 3305 -8 219 254 0 0 chr2 57405360 57405423 -193282431 + (TA)n Simple_repeat Simple_repeat 1 63 0 2754 220 72 17 chr2 57405911 57406665 -193281189 + L2 LINE L2 1803 2597 -717 542 219 73 24 chr2 57406631 57406795 -193281059 + MIR SINE MIR 70 241 -21 * 1754 152 22 4 chr2 57406796 57407072 -193280782 + AluJb SINE Alu 1 281 -31 264 30 0 0 chr2 57407937 57407970 -193279884 + (TG)n Simple_repeat Simple_repeat 2 34 0 1897 122 24 27 chr2 57411255 57411549 -193276305 - AluJo SINE Alu -19 293 1 2472 66 20 0 chr2 57411549 57411852 -193276002 - AluSc SINE Alu 0 309 1 254 288 272 8 chr2 57412479 57412604 -193275250 + MIR3 SINE MIR 3 160 -48 1520 177 53 14 chr2 57413066 57413349 -193274505 - AluJo SINE Alu -14 298 5 23 33 0 0 chr2 57413583 57413613 -193274241 + AT_rich Low_complexity Low_complexity 1 30 0 306 0 0 0 chr2 57414671 57414705 -193273149 + (A)n Simple_repeat Simple_repeat 1 34 0 295 305 11 11 chr2 57415220 57415315 -193272539 + MER5B DNA MER1_type 3 97 -81 22 0 0 0 chr2 57415345 57415367 -193272487 + AT_rich Low_complexity Low_complexity 1 22 0 2061 143 3 0 chr2 57415628 57415935 -193271919 + AluSx SINE Alu 1 308 -4 2044 222 88 168 chr2 57416005 57417382 -193270472 + L2 LINE L2 1234 2506 -807 382 194 101 39 chr2 57417382 57417511 -193270343 + L1MC5 LINE L1 7781 7917 -44 2044 222 88 168 chr2 57417511 57418259 -193269595 + L2 LINE L2 2506 3312 -1 494 270 29 34 chr2 57418430 57418634 -193269220 + L1MEc LINE L1 60 262 -6134 319 363 36 21 chr2 57418664 57418945 -193268909 + L1MEc LINE L1 252 536 -5860 1278 256 57 18 chr2 57419125 57419614 -193268240 + L1MEc LINE L1 1565 2072 -4324 327 179 1 183 chr2 57419626 57419768 -193268086 + L1ME1 LINE L1 6042 6160 -6 342 241 84 25 chr2 57419809 57420012 -193267842 + L1MEd LINE L1 895 1109 -5010 357 292 77 14 chr2 57420167 57420415 -193267439 + L1MEd LINE L1 1170 1569 -921 777 182 111 6 chr2 57420672 57420853 -193267001 + MER3 DNA MER1_type 10 209 0 225 240 0 0 chr2 57420810 57420860 -193266994 - MER3 DNA MER1_type -119 90 41 * 506 168 186 18 chr2 57421166 57421279 -193266575 - FLAM_C SINE Alu -1 132 1 2218 207 81 6 chr2 57422370 57422853 -193265001 + LTR53 LTR ERVL 1 519 0 304 367 33 0 chr2 57423910 57424030 -193263824 - L2 LINE L2 -3 3310 3187 540 235 245 30 chr2 57424053 57424253 -193263601 - MIR SINE MIR -19 243 1 201 271 116 70 chr2 57425084 57425213 -193262641 - MIR SINE MIR -118 144 10 483 96 0 0 chr2 57425797 57425870 -193261984 - L1MA5A LINE L1 -6 6291 6219 2396 90 0 0 chr2 57426454 57426755 -193261099 - AluSg SINE Alu -8 302 2 271 216 156 164 chr2 57426902 57427133 -193260721 - MIR SINE MIR -6 256 28 2047 134 0 3 chr2 57427424 57427716 -193260138 - AluSg SINE Alu -19 291 1 1965 106 75 33 chr2 57427982 57428342 -193259512 + THE1C LTR MaLR 1 375 0 9464 127 17 41 chr2 57428344 57429962 -193257892 + THE1C-int LTR MaLR 3 1580 0 1616 140 82 62 chr2 57429962 57430318 -193257536 + THE1B LTR MaLR 1 363 -1 2165 124 3 3 chr2 57430817 57431123 -193256731 - AluSq SINE Alu -6 307 2 296 226 177 16 chr2 57431495 57431619 -193256235 - MIR SINE MIR -2 260 117 206 326 78 23 chr2 57432019 57432148 -193255706 - MIR3 SINE MIR -6 202 67 2444 90 0 3 chr2 57432414 57432724 -193255130 - AluSc SINE Alu 0 309 1 776 246 85 9 chr2 57433084 57433295 -193254559 - MIR SINE MIR -22 240 14 184 212 0 0 chr2 57434863 57434896 -193252958 - L2 LINE L2 -18 3254 3222 892 254 194 10 chr2 57434914 57435300 -193252554 + L2 LINE L2 2443 2899 -415 703 148 47 40 chr2 57435319 57435468 -193252386 + MER5A DNA MER1_type 33 182 -7 521 187 9 169 chr2 57435557 57435782 -193252072 - MER5A DNA MER1_type 0 189 1 1027 267 111 6 chr2 57435796 57436155 -193251699 + L2 LINE L2 2917 3313 0 516 285 127 40 chr2 57436800 57437301 -193250553 - L2 LINE L2 -43 3270 2718 2204 95 7 13 chr2 57437301 57437605 -193250249 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr2 57437905 57437935 -193249919 + AT_rich Low_complexity Low_complexity 1 30 0 324 297 110 53 chr2 57439062 57439308 -193248546 - MIR SINE MIR 0 262 3 1133 221 73 21 chr2 57439342 57439362 -193248492 - L1ME1 LINE L1 -5 6161 6144 1931 162 131 33 chr2 57439362 57439819 -193248035 - MLT1D LTR MaLR 0 505 4 1133 221 73 21 chr2 57439819 57440138 -193247716 - L1ME1 LINE L1 -22 6144 5804 422 236 123 0 chr2 57440138 57440244 -193247610 + MIR SINE MIR 70 188 -74 886 236 110 41 chr2 57440251 57440543 -193247311 - L2 LINE L2 -40 3273 2962 1308 153 9 33 chr2 57441629 57441844 -193246010 + AluJb SINE Alu 87 296 -16 1204 156 5 10 chr2 57441846 57442051 -193245803 + AluJo SINE Alu 1 204 -108 1024 179 0 6 chr2 57442705 57442867 -193244987 + FRAM SINE Alu 1 153 -23 1390 187 58 58 chr2 57443054 57443418 -193244436 + MLT1A1 LTR MaLR 1 364 -1 410 273 139 28 chr2 57443508 57443724 -193244130 + MIR SINE MIR 2 241 -21 312 267 69 20 chr2 57443819 57443920 -193243934 - L3 LINE CR1 -1294 283 178 26 50 0 0 chr2 57444323 57444363 -193243491 + AT_rich Low_complexity Low_complexity 1 40 0 518 226 136 74 chr2 57444965 57445208 -193242646 - MER112 DNA MER1_type -1 259 2 27 0 0 0 chr2 57445260 57445287 -193242567 + AT_rich Low_complexity Low_complexity 1 27 0 280 274 98 12 chr2 57446672 57446836 -193241018 + HAL1 LINE L1 1108 1285 -1222 768 224 52 60 chr2 57446840 57446979 -193240875 - MIR SINE MIR -10 252 114 3218 118 45 0 chr2 57446979 57447496 -193240358 - MER34 LTR ERV1 0 542 3 768 224 52 60 chr2 57447496 57447606 -193240248 - MIR SINE MIR -148 114 5 606 271 66 29 chr2 57447657 57447901 -193239953 + HAL1 LINE L1 1334 1586 -921 279 275 152 22 chr2 57448097 57448235 -193239619 + HAL1b LINE L1 749 904 -444 1103 314 119 18 chr2 57448295 57448859 -193238995 + L2 LINE L2 2234 2854 -460 678 311 38 38 chr2 57449687 57450002 -193237852 - HAL1 LINE L1 -2192 315 1 377 284 179 19 chr2 57450055 57450217 -193237637 + MIR SINE MIR 72 259 -3 242 212 197 0 chr2 57450358 57450424 -193237430 + L2 LINE L2 3233 3311 -2 24 77 0 0 chr2 57450535 57450587 -193237267 + AT_rich Low_complexity Low_complexity 1 52 0 2251 82 0 23 chr2 57451749 57452055 -193235799 - AluSx SINE Alu -13 299 1 968 203 130 51 chr2 57452151 57452597 -193235257 - MLT1H LTR MaLR -2 622 20 429 294 49 30 chr2 57452619 57452856 -193234998 - L1M4c LINE L1 -853 2152 1819 3743 65 38 6 chr2 57453148 57453670 -193234184 + L1PA13 LINE L1 5606 6144 -19 289 191 0 0 chr2 57453840 57453887 -193233967 + MER66A LTR ERV1 287 333 -145 1157 154 84 49 chr2 57454330 57454526 -193233328 - L1MA8 LINE L1 -8 6283 6072 1380 174 154 3 chr2 57454526 57454825 -193233029 + MER2 DNA MER2_type 1 344 0 1157 154 84 49 chr2 57454825 57454913 -193232941 - L1MA8 LINE L1 -219 6072 5989 1490 224 59 90 chr2 57455107 57455665 -193232189 - L1M4c LINE L1 -5998 544 4 409 323 96 45 chr2 57455685 57456758 -193231096 - L1M4 LINE L1 -913 5233 4106 244 311 83 28 chr2 57456846 57457200 -193230654 - HAL1b LINE L1 -806 936 700 450 167 286 40 chr2 57457236 57457362 -193230492 + MER96 DNA MER1_type? 19 175 0 585 279 136 44 chr2 57457367 57457807 -193230047 - L1ME LINE L1 -1146 1295 683 405 283 48 38 chr2 57458578 57458743 -193229111 - MIR SINE MIR -62 146 23 22 35 0 0 chr2 57459263 57459292 -193228562 + AT_rich Low_complexity Low_complexity 1 29 0 2172 81 0 39 chr2 57459477 57459784 -193228070 - AluSc SINE Alu -14 295 1 238 189 81 40 chr2 57459934 57460008 -193227846 - L1MC5 LINE L1 -50 7911 7835 1683 154 34 27 chr2 57460301 57460599 -193227255 - AluJo SINE Alu -12 300 1 25 51 0 0 chr2 57460608 57460647 -193227207 + AT_rich Low_complexity Low_complexity 1 39 0 872 178 7 0 chr2 57461140 57461286 -193226568 + FRAM SINE Alu 2 148 -18 558 143 82 10 chr2 57461379 57461477 -193226377 + FLAM_A SINE Alu 1 105 -37 354 45 0 0 chr2 57461486 57461530 -193226324 + (TAA)n Simple_repeat Simple_repeat 1 44 0 565 255 56 25 chr2 57462759 57462920 -193224934 + MIR SINE MIR 19 184 -78 432 332 79 29 chr2 57463711 57463988 -193223866 + L1MEd LINE L1 228 518 -5601 336 256 148 35 chr2 57464028 57464231 -193223623 + L1MEd LINE L1 577 802 -5317 249 315 20 47 chr2 57464272 57464421 -193223433 - HAL1 LINE L1 -1166 1341 1197 1704 157 21 0 chr2 57464456 57464743 -193223111 - AluSx SINE Alu -19 293 1 25 0 0 0 chr2 57465531 57465556 -193222298 + AT_rich Low_complexity Low_complexity 1 25 0 200 114 29 0 chr2 57466222 57466257 -193221597 + A-rich Low_complexity Low_complexity 2 37 0 349 319 108 13 chr2 57466337 57466494 -193221360 - MIR SINE MIR -30 232 61 264 224 104 45 chr2 57466730 57466864 -193220990 + L1MEd LINE L1 60 201 -5918 1085 117 6 35 chr2 57467455 57467626 -193220228 + MSTB LTR MaLR 213 378 -48 333 222 200 32 chr2 57467734 57467919 -193219935 + L1MEd LINE L1 970 1185 -4934 879 255 48 0 chr2 57467919 57468127 -193219727 + MLT1J LTR MaLR 1 218 -293 310 356 34 43 chr2 57569135 57569343 -193118511 + L2 LINE L2 2653 2858 -456 592 292 92 33 chr2 57569623 57570472 -193117382 + L1M4 LINE L1 3809 4707 -1439 613 282 31 68 chr2 57570623 57571021 -193116833 + L1M1 LINE L1 730 1790 -5775 305 330 58 27 chr2 57573200 57573388 -193114466 - L2 LINE L2 -188 3084 2891 931 204 0 0 chr2 57575412 57575564 -193112290 + FRAM SINE Alu 1 152 -14 884 239 107 16 chr2 57577527 57577836 -193110018 - MER46C DNA MER2_type 0 338 2 838 139 8 23 chr2 57578942 57579071 -193108783 - FLAM_C SINE Alu -16 127 1 2365 110 0 0 chr2 57580072 57580382 -193107472 - AluSq SINE Alu -1 312 3 263 273 27 27 chr2 57581188 57581298 -193106556 + MIR SINE MIR 98 207 -55 1014 155 6 12 chr2 57586425 57586593 -193101261 + AluJb SINE Alu 137 303 -9 22 0 0 0 chr2 57587880 57587902 -193099952 + AT_rich Low_complexity Low_complexity 1 22 0 240 100 0 0 chr2 57587903 57587943 -193099911 + (TG)n Simple_repeat Simple_repeat 2 41 0 24 0 0 0 chr2 57590432 57590456 -193097398 + AT_rich Low_complexity Low_complexity 1 24 0 921 199 9 69 chr2 57592523 57592739 -193095115 - MER3 DNA MER1_type 0 209 7 2088 128 0 0 chr2 57595040 57595346 -193092508 - AluSx SINE Alu 0 306 1 26 30 0 0 chr2 57597102 57597135 -193090719 + AT_rich Low_complexity Low_complexity 1 33 0 1789 143 44 0 chr2 57597320 57597593 -193090261 + AluSx SINE Alu 1 320 0 295 29 0 0 chr2 57597593 57597628 -193090226 + (TAA)n Simple_repeat Simple_repeat 3 180 0 1657 184 0 14 chr2 57601254 57601542 -193086312 + AluJo SINE Alu 12 295 -17 785 219 66 0 chr2 57604370 57604553 -193083301 - MER58A DNA MER1_type -12 212 18 269 286 31 43 chr2 57605769 57605930 -193081924 - Charlie7 DNA MER1_type 0 2612 2454 1117 274 152 13 chr2 57606034 57606567 -193081287 - L1MC4a LINE L1 -1911 5897 5291 225 0 0 0 chr2 57606567 57606592 -193081262 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 531 249 107 27 chr2 57606703 57606928 -193080926 - Charlie7 DNA MER1_type -399 2213 1971 318 288 8 30 chr2 57610161 57610293 -193077561 - MIR SINE MIR 0 262 134 1243 181 68 26 chr2 57611188 57611498 -193076356 + MER33 DNA MER1_type 1 323 -1 211 250 25 17 chr2 57613638 57613710 -193074144 + CT-rich Low_complexity Low_complexity 1 121 0 212 297 120 9 chr2 57618876 57619003 -193068851 - MIR SINE MIR -55 153 12 227 276 52 0 chr2 57619188 57619246 -193068608 + MER91 DNA MER1_type 130 190 0 24 0 0 0 chr2 57622459 57622483 -193065371 + AT_rich Low_complexity Low_complexity 1 24 0 1299 195 72 60 chr2 57623718 57624052 -193063802 - MER58B DNA MER1_type -1 340 3 546 171 117 78 chr2 57625187 57625392 -193062462 - L1MC5 LINE L1 -820 7141 6929 1604 214 148 45 chr2 57625671 57626331 -193061523 - L1MD2 LINE L1 0 6359 5632 252 0 0 0 chr2 57626550 57626578 -193061276 + (TG)n Simple_repeat Simple_repeat 2 29 0 225 0 0 0 chr2 57626841 57626866 -193060988 + (TG)n Simple_repeat Simple_repeat 1 25 0 2236 87 0 7 chr2 57627920 57628207 -193059647 + AluSg SINE Alu 1 285 -25 303 271 17 68 chr2 57629670 57629788 -193058066 - MIR SINE MIR -4 258 147 340 284 200 11 chr2 57630234 57630424 -193057430 - MIR SINE MIR -36 226 1 252 186 0 0 chr2 57630844 57630903 -193056951 + GA-rich Low_complexity Low_complexity 1 59 0 22 0 0 0 chr2 57631862 57631884 -193055970 + AT_rich Low_complexity Low_complexity 1 22 0 1926 147 10 3 chr2 57631991 57632284 -193055570 + AluSx SINE Alu 1 295 -17 2519 166 87 42 chr2 57633084 57633222 -193054632 - MER6A DNA MER2_type -260 605 475 2385 86 0 0 chr2 57633222 57633514 -193054340 + AluSg SINE Alu 1 292 -18 2519 166 87 42 chr2 57633514 57633953 -193053901 - MER6A DNA MER2_type -390 475 2 724 162 101 27 chr2 57634050 57634355 -193053499 - AluJb SINE Alu 0 312 144 927 268 94 48 chr2 57634401 57634816 -193053038 - LTR67 LTR ERVL -10 547 114 2182 181 46 44 chr2 57634903 57635279 -193052575 - MLT1D LTR MaLR 0 505 126 1688 129 123 26 chr2 57635279 57635621 -193052233 + THE1C LTR MaLR 1 375 0 2182 181 46 44 chr2 57635621 57635748 -193052106 - MLT1D LTR MaLR -379 126 1 2411 110 0 0 chr2 57636188 57636498 -193051356 - AluSx SINE Alu -2 310 1 296 232 10 101 chr2 57636619 57636718 -193051136 + L2 LINE L2 3182 3271 -1 3111 223 110 23 chr2 57638136 57639090 -193048764 + L1MC4 LINE L1 7004 8040 -2 854 147 5 27 chr2 57639303 57639487 -193048367 + CT-rich Low_complexity Low_complexity 1 180 0 1997 133 10 13 chr2 57639487 57639894 -193047960 - AluSq SINE Alu 0 406 1 759 160 53 77 chr2 57640266 57640435 -193047419 + MER69A DNA AcHobo 1 165 -12 1989 117 10 20 chr2 57640658 57640956 -193046898 - AluSg SINE Alu -15 295 1 266 253 74 0 chr2 57641542 57641637 -193046217 - L2 LINE L2 -5 3267 3166 755 181 7 0 chr2 57641945 57642089 -193045765 - AluJb SINE Alu -2 310 166 474 224 109 0 chr2 57644441 57644588 -193043266 - L1MC4a LINE L1 -1845 5963 5801 22 35 0 0 chr2 57644889 57644918 -193042936 + AT_rich Low_complexity Low_complexity 1 29 0 2342 104 0 0 chr2 57644918 57645217 -193042637 + AluSg SINE Alu 1 299 -11 359 237 227 77 chr2 57645780 57646020 -193041834 - MLT1H1 LTR MaLR -4 550 347 2048 209 24 21 chr2 57646020 57646442 -193041412 + MSTB LTR MaLR 4 426 0 359 237 227 77 chr2 57646442 57646576 -193041278 - MLT1H1 LTR MaLR -207 347 115 902 145 0 0 chr2 57646779 57646910 -193040944 + FLAM_A SINE Alu 1 131 -2 885 75 0 9 chr2 57646926 57647141 -193040713 - AluY SINE Alu -6 305 2 22583 143 24 26 chr2 57647864 57648677 -193039177 + L1MA3 LINE L1 10 823 -6901 2598 60 0 10 chr2 57648677 57648991 -193038863 - AluY SINE Alu 0 311 1 22583 143 24 26 chr2 57648991 57650442 -193037412 + L1MA3 LINE L1 823 2275 -5449 2050 112 11 4 chr2 57650442 57650744 -193037110 + AluSc SINE Alu 1 304 0 22583 143 24 26 chr2 57650744 57652282 -193035572 + L1MA3 LINE L1 2275 3815 -3909 279 0 0 0 chr2 57652282 57652313 -193035541 + (TCTCCC)n Simple_repeat Simple_repeat 3 33 0 7152 60 13 9 chr2 57652313 57653720 -193034134 + SVA Other Other 53 1386 0 22583 143 24 26 chr2 57653720 57657555 -193030299 + L1MA3 LINE L1 3813 7618 -106 416 96 0 108 chr2 57657732 57657815 -193030039 + MADE1 DNA Mariner 1 74 -6 395 68 14 68 chr2 57657788 57657862 -193029992 + MADE1 DNA Mariner 11 80 0 * 569 233 201 11 chr2 57658194 57658383 -193029471 - MIR SINE MIR -1 261 37 287 291 12 0 chr2 57659217 57659303 -193028551 + L2 LINE L2 3224 3310 -3 2241 94 7 10 chr2 57659558 57659857 -193027997 - AluSg SINE Alu -12 298 1 2021 152 0 10 chr2 57660067 57660377 -193027477 - AluSc SINE Alu -2 307 1 489 338 49 4 chr2 57660489 57660714 -193027140 + MIR SINE MIR 15 249 -13 877 174 29 23 chr2 57660717 57660889 -193026965 + MER45A DNA AcHobo 5 177 -1 389 183 12 0 chr2 57661056 57661138 -193026716 - L1MB8 LINE L1 -12 6166 6084 2270 111 0 7 chr2 57661166 57661463 -193026391 - AluSq SINE Alu -18 295 1 460 307 36 17 chr2 57661624 57661820 -193026034 - MIR3 SINE MIR -12 196 1 21 0 0 0 chr2 57662406 57662427 -193025427 + AT_rich Low_complexity Low_complexity 1 21 0 249 211 84 21 chr2 57662437 57662532 -193025322 + MER52A LTR ERV1 1 101 -1654 7606 162 137 20 chr2 57662975 57664497 -193023357 + MER52A LTR ERV1 55 1755 0 655 295 40 22 chr2 57664497 57664724 -193023130 - MIR SINE MIR -29 233 3 21 57 0 0 chr2 57664788 57664823 -193023031 + AT_rich Low_complexity Low_complexity 1 35 0 1263 235 45 49 chr2 57665056 57665588 -193022266 - L1MC5 LINE L1 -59 7902 7373 434 295 76 12 chr2 57665711 57666151 -193021703 - L1MC5 LINE L1 -743 5403 4965 509 200 48 0 chr2 57666794 57666899 -193020955 - Zaphod DNA AcHobo 0 4031 3922 2383 102 0 0 chr2 57666911 57667216 -193020638 + AluSx SINE Alu 1 305 -7 778 261 113 58 chr2 57667246 57667537 -193020317 - MER115 DNA AcHobo -297 396 90 872 203 16 16 chr2 57667560 57667752 -193020102 - MIR SINE MIR -54 208 17 182 255 39 0 chr2 57667910 57667961 -193019893 + MIR3 SINE MIR 149 201 -7 37 30 0 30 chr2 57668039 57668073 -193019781 + AT_rich Low_complexity Low_complexity 1 34 -30 1992 157 0 0 chr2 57668073 57668360 -193019494 - AluSx SINE Alu -25 287 1 37 30 0 30 chr2 57668360 57668391 -193019463 + AT_rich Low_complexity Low_complexity 34 64 0 3786 148 53 74 chr2 57669634 57669943 -193017911 - L1MB8 LINE L1 -1 6177 5863 1742 96 0 0 chr2 57669943 57670162 -193017692 - AluSg/x SINE Alu -3 309 91 3786 148 53 74 chr2 57670162 57670734 -193017120 - L1MB8 LINE L1 -315 5863 5314 354 115 0 0 chr2 57670915 57670967 -193016887 - Alu SINE Alu -3 305 254 545 156 0 0 chr2 57670968 57671058 -193016796 + AluJ/FRAM SINE Alu 220 309 -3 1262 298 52 5 chr2 57671092 57671495 -193016359 + MLT1J LTR MaLR 90 511 0 742 208 53 44 chr2 57671507 57671733 -193016121 - HAL1b LINE L1 -778 570 343 378 261 98 101 chr2 57671759 57672472 -193015382 - L1MC4 LINE L1 -72 7970 7243 1383 110 0 41 chr2 57672539 57672757 -193015097 + Tigger2a DNA MER2_type 1 209 -225 1619 115 12 20 chr2 57672773 57673017 -193014837 - THE1B LTR MaLR -122 242 1 587 241 94 11 chr2 57673870 57674061 -193013793 + MIR SINE MIR 4 210 -52 995 252 95 76 chr2 57674085 57674218 -193013636 + MLT1J LTR MaLR 59 188 -323 1747 161 27 3 chr2 57674218 57674510 -193013344 - AluJb SINE Alu -13 299 1 995 252 95 76 chr2 57674510 57674809 -193013045 + MLT1J LTR MaLR 188 499 -12 946 187 43 43 chr2 57674839 57675069 -193012785 + MIR SINE MIR 12 241 -21 391 281 114 48 chr2 57675198 57675408 -193012446 - MIR SINE MIR 0 262 39 1907 116 19 0 chr2 57675963 57676222 -193011632 + AluSx SINE Alu 1 264 -48 182 37 37 0 chr2 57676236 57676263 -193011591 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 211 135 27 0 chr2 57678656 57678693 -193009161 - SUBTEL_sa Satellite Satellite -126 48 11 37 0 0 0 chr2 57678906 57678943 -193008911 + GC_rich Low_complexity Low_complexity 1 37 0 445 324 83 5 chr2 57682383 57682599 -193005255 + MIR SINE MIR 20 252 -10 260 286 60 65 chr2 57682871 57683056 -193004798 + MIR SINE MIR 6 189 -73 462 354 14 5 chr2 57683329 57683538 -193004316 - MIR SINE MIR -21 241 31 1411 230 0 0 chr2 57683770 57684053 -193003801 + AluSq SINE Alu 26 308 -5 25 0 0 0 chr2 57684114 57684139 -193003715 + AT_rich Low_complexity Low_complexity 1 25 0 189 297 155 26 chr2 57684345 57684500 -193003354 - MIR SINE MIR -6 256 82 706 281 103 19 chr2 57684697 57685017 -193002837 - L2 LINE L2 0 3313 2967 1461 155 103 4 chr2 57685262 57685514 -193002340 + AluJo SINE Alu 14 290 -22 2720 165 29 8 chr2 57685755 57686468 -193001386 - L1M4 LINE L1 -586 5598 4871 2168 123 3 0 chr2 57687948 57688241 -192999613 + AluSx SINE Alu 1 294 -18 199 386 70 4 chr2 57688821 57689080 -192998774 + L2 LINE L2 2808 3083 -189 215 300 59 55 chr2 57689809 57690029 -192997825 - L2 LINE L2 -221 3051 2831 346 237 0 0 chr2 57690288 57690364 -192997490 + MIR SINE MIR 65 140 -68 1552 236 43 7 chr2 57690726 57691146 -192996708 + L1MC4 LINE L1 7462 7896 -146 1847 104 0 0 chr2 57691184 57691425 -192996429 - AluSg/x SINE Alu -6 306 66 863 262 101 51 chr2 57691534 57692159 -192995695 + L2 LINE L2 2638 3313 0 315 123 123 0 chr2 57692229 57692286 -192995568 - Charlie4a DNA MER1_type -14 494 431 1723 222 137 18 chr2 57692302 57692851 -192995003 - L1ME3A LINE L1 -1 6169 5556 612 128 0 0 chr2 57692853 57692939 -192994915 + AluS SINE Alu 2 87 -225 1375 204 65 35 chr2 57692966 57693397 -192994457 - Charlie4a DNA MER1_type -63 445 2 390 281 61 89 chr2 57693413 57693659 -192994195 - L2 LINE L2 -11 3261 3023 * 610 276 205 41 chr2 57693632 57694364 -192993490 - L2 LINE L2 -569 2745 1894 23 33 0 0 chr2 57694830 57694860 -192992994 + AT_rich Low_complexity Low_complexity 1 30 0 265 276 82 59 chr2 57695075 57695245 -192992609 + L2 LINE L2 2556 2729 -585 * 357 191 34 22 chr2 57695217 57695306 -192992548 - MER5A DNA MER1_type -50 139 50 2342 214 157 5 chr2 57695306 57695968 -192991886 + L1MC4 LINE L1 6648 7410 -632 205 308 15 15 chr2 57696522 57696587 -192991267 + MIR SINE MIR 20 84 -178 3291 154 52 7 chr2 57696745 57697322 -192990532 - MER6A DNA MER2_type -2 603 1 187 292 77 0 chr2 57697401 57697466 -192990388 - MIR SINE MIR -173 89 20 324 193 62 90 chr2 57697556 57697701 -192990153 - Charlie7 DNA MER1_type -2 2610 2470 202 250 23 45 chr2 57698606 57698694 -192989160 - L2 LINE L2 -925 2389 2304 593 27 13 0 chr2 57698782 57698857 -192988997 + (CA)n Simple_repeat Simple_repeat 2 77 0 1656 195 0 14 chr2 57699388 57699685 -192988169 + AluJo SINE Alu 1 293 -19 218 301 108 32 chr2 57702304 57702397 -192985457 + L2 LINE L2 3169 3268 -4 1570 184 7 18 chr2 57702474 57702756 -192985098 - AluJo SINE Alu -33 279 1 442 265 97 31 chr2 57702810 57703006 -192984848 - L1MC/D LINE L1 -2050 5758 5550 24 67 0 0 chr2 57703221 57703266 -192984588 + AT_rich Low_complexity Low_complexity 1 45 0 777 241 48 0 chr2 57703482 57703669 -192984185 - MIR SINE MIR -26 236 41 587 282 87 89 chr2 57704327 57704890 -192982964 - MLT1K LTR MaLR -16 572 11 1653 235 89 72 chr2 57706192 57706573 -192981281 - L1ME3A LINE L1 -5 6099 5726 239 139 0 0 chr2 57706573 57706609 -192981245 - U2 snRNA snRNA -152 36 1 1653 235 89 72 chr2 57706609 57706692 -192981162 - L1ME3A LINE L1 -378 5726 5646 1681 101 0 0 chr2 57706692 57706909 -192980945 - AluSg/x SINE Alu -22 290 74 1653 235 89 72 chr2 57706909 57707169 -192980685 - L1ME3A LINE L1 -458 5646 5326 1573 171 29 66 chr2 57707174 57707554 -192980300 + MLT1D LTR MaLR 5 370 -135 1091 140 0 45 chr2 57707556 57707734 -192980120 - FRAM SINE Alu -11 165 1 1259 108 0 0 chr2 57707748 57707914 -192979940 + AluSg SINE Alu 1 166 -144 732 167 14 21 chr2 57708020 57708164 -192979690 + MLT1D LTR MaLR 363 505 0 2484 232 81 29 chr2 57708164 57708521 -192979333 - L1ME3A LINE L1 -751 5329 4992 923 184 48 34 chr2 57708521 57708727 -192979127 + MER3 DNA MER1_type 1 209 0 2484 232 81 29 chr2 57708727 57709387 -192978467 - L1ME3A LINE L1 -1088 4992 4259 1430 136 5 0 chr2 57709387 57709600 -192978254 - AluJb SINE Alu -15 297 84 269 279 19 19 chr2 57709975 57710079 -192977775 - L1ME3A LINE L1 -5924 146 43 1080 253 163 70 chr2 57710460 57711739 -192976115 - HAL1 LINE L1 -1076 1431 34 524 391 50 20 chr2 57712136 57712479 -192975375 + L2 LINE L2 2916 3268 -4 181 135 39 0 chr2 57713604 57713656 -192974198 + (TA)n Simple_repeat Simple_repeat 2 55 0 252 278 201 0 chr2 57714132 57714276 -192973578 - L1MC/D LINE L1 -2048 5760 5588 207 0 0 0 chr2 57714556 57714579 -192973275 + (T)n Simple_repeat Simple_repeat 1 23 0 3515 230 103 49 chr2 57715464 57717226 -192970628 - L1MC4 LINE L1 -3 8039 6088 2197 83 3 3 chr2 57719185 57719475 -192968379 - AluY SINE Alu -3 308 19 2950 163 74 102 chr2 57719591 57720502 -192967352 - L1MD2 LINE L1 0 8042 6241 408 40 0 0 chr2 57721331 57721381 -192966473 + (TG)n Simple_repeat Simple_repeat 2 51 0 342 90 0 2 chr2 57721405 57721461 -192966393 - FLAM SINE Alu -1 132 84 971 167 151 11 chr2 57721462 57721648 -192966206 - AluJo SINE Alu -95 217 6 434 297 81 7 chr2 57722334 57722503 -192965351 + MIR3 SINE MIR 8 194 -14 1347 229 19 19 chr2 57723293 57723656 -192964198 - L1MA10 LINE L1 -3 6331 5969 422 141 253 0 chr2 57723967 57724066 -192963788 + MER94 DNA DNA 11 134 0 605 333 88 6 chr2 57724293 57724623 -192963231 + L2 LINE L2 1787 2143 -1171 421 272 65 71 chr2 57724670 57724854 -192963000 - L2 LINE L2 -887 2427 2245 297 362 69 9 chr2 57725868 57725984 -192961870 - L2 LINE L2 -9 3263 3141 407 282 179 10 chr2 57726312 57726507 -192961347 - MIR SINE MIR -10 252 25 228 286 63 16 chr2 57727586 57727649 -192960205 + MIR SINE MIR 14 79 -183 804 167 202 31 chr2 57727672 57727900 -192959954 - MLT1J LTR MaLR -153 358 92 264 216 147 49 chr2 57727936 57728038 -192959816 - LTR16A LTR ERVL -6 444 333 479 279 77 11 chr2 57728056 57728239 -192959615 - LTR16A LTR ERVL -230 220 26 309 284 0 11 chr2 57728293 57728381 -192959473 + MIR SINE MIR 159 245 -17 1394 274 83 17 chr2 57728794 57729475 -192958379 + L2 LINE L2 2593 3313 0 241 226 130 90 chr2 57729621 57729798 -192958056 - L1M4 LINE L1 -2304 3842 3659 1234 91 0 32 chr2 57729836 57730022 -192957832 - MER107 DNA MER1_type -7 190 11 367 238 0 0 chr2 57730342 57730426 -192957428 + L1PA16 LINE L1 6059 6142 -24 202 184 61 0 chr2 57732064 57732113 -192955741 + GA-rich Low_complexity Low_complexity 2 53 0 2348 93 0 13 chr2 57732338 57732651 -192955203 + AluY SINE Alu 1 309 -2 27 29 0 0 chr2 57732659 57732693 -192955161 + AT_rich Low_complexity Low_complexity 1 34 0 2352 90 0 23 chr2 57732988 57733298 -192954556 + AluSq SINE Alu 1 303 -10 1833 173 20 0 chr2 57733310 57733616 -192954238 + AluJb SINE Alu 1 312 0 206 216 0 0 chr2 57733623 57733660 -192954194 + polypurine Low_complexity Low_complexity 4 40 0 594 199 129 27 chr2 57734783 57734969 -192952885 - MIR SINE MIR 0 262 58 1844 160 7 3 chr2 57735406 57735699 -192952155 - AluJb SINE Alu -16 296 3 376 347 126 9 chr2 57736520 57736742 -192951112 + MIR SINE MIR 15 262 0 322 319 80 70 chr2 57737620 57737690 -192950164 - L1ME LINE L1 -297 5824 5756 1643 184 21 10 chr2 57737690 57737978 -192949876 - AluJo SINE Alu -21 291 1 322 319 80 70 chr2 57737978 57738221 -192949633 - L1ME LINE L1 -365 5756 5508 983 143 11 26 chr2 57738240 57738429 -192949425 - Tigger2 DNA MER2_type -14 2704 2519 563 77 250 0 chr2 57738429 57738533 -192949321 - L1PA10 LINE L1 -1 6167 6038 255 58 58 0 chr2 57738539 57738591 -192949263 - Tigger2 DNA MER2_type -194 2524 2470 1205 140 0 28 chr2 57738667 57738881 -192948973 - Tigger2 DNA MER2_type -1974 744 537 2046 119 3 26 chr2 57738903 57739215 -192948639 - AluSx SINE Alu -7 305 1 2231 154 70 5 chr2 57739217 57739658 -192948196 - Tigger2 DNA MER2_type -2248 470 1 192 40 0 0 chr2 57739658 57739683 -192948171 + (TA)n Simple_repeat Simple_repeat 2 26 0 241 273 171 0 chr2 57740107 57740195 -192947659 - LTR67 LTR ERVL -53 504 402 693 249 102 10 chr2 57741111 57741338 -192946516 + MIR SINE MIR 11 257 -5 1998 194 35 38 chr2 57741550 57742101 -192945753 - MER73 LTR ERVL 0 644 96 1025 167 70 4 chr2 57742099 57742327 -192945527 - MER54A LTR ERVL -652 249 7 * 2660 35 0 6 chr2 57742965 57743278 -192944576 + AluY SINE Alu 1 311 0 427 268 196 28 chr2 57743383 57743562 -192944292 - MIR SINE MIR -31 231 23 2674 39 0 0 chr2 57744453 57744759 -192943095 - AluY SINE Alu -5 306 1 481 272 34 27 chr2 57745511 57745658 -192942196 + MIR3 SINE MIR 50 197 -11 427 238 66 16 chr2 57746153 57746281 -192941573 + L1ME1 LINE L1 5605 5738 -446 * 609 208 40 0 chr2 57746273 57746422 -192941432 + L1ME1 LINE L1 6011 6165 -1 1756 181 10 0 chr2 57746720 57747008 -192940846 + AluSx SINE Alu 1 291 -21 365 223 165 69 chr2 57747317 57747577 -192940277 + MLT1J LTR MaLR 1 285 -226 432 302 89 30 chr2 57747755 57747990 -192939864 - MIR SINE MIR -1 261 13 1300 176 75 38 chr2 57748867 57749214 -192938640 - THE1C LTR MaLR -6 369 10 2043 91 4 7 chr2 57750648 57750924 -192936930 + AluY SINE Alu 32 306 -5 356 248 0 59 chr2 57750927 57751028 -192936826 - MER5A DNA MER1_type -86 103 9 834 140 200 20 chr2 57751198 57751398 -192936456 - Tigger1 DNA MER2_type 0 2418 2183 464 281 0 0 chr2 57751455 57751551 -192936303 + MIR SINE MIR 9 104 -158 2367 235 66 44 chr2 57751551 57751903 -192935951 - L1M4 LINE L1 -1322 4824 4481 2181 109 0 7 chr2 57751903 57752207 -192935647 - AluSg SINE Alu -8 302 1 2367 235 66 44 chr2 57752207 57752795 -192935059 - L1M4 LINE L1 -1665 4481 3863 2171 121 0 0 chr2 57752806 57753095 -192934759 - AluSx SINE Alu -23 289 1 1886 104 4 0 chr2 57753126 57753377 -192934477 - AluSc SINE Alu -57 252 1 615 211 18 0 chr2 57753381 57753495 -192934359 + MER58B DNA MER1_type 225 340 -1 1176 197 61 123 chr2 57753758 57754030 -192933824 + MER21B LTR ERV1 324 611 -252 1779 151 25 4 chr2 57754030 57754308 -192933546 + AluJo SINE Alu 1 284 -28 1176 197 61 123 chr2 57754308 57754456 -192933398 + MER21B LTR ERV1 611 716 -147 2077 140 20 60 chr2 57754456 57754807 -192933047 + MER1B DNA MER1_type 1 337 0 1176 197 61 123 chr2 57754807 57754841 -192933013 + MER21B LTR ERV1 716 751 -112 1594 171 4 0 chr2 57754967 57755247 -192932607 - L1 LINE L1 -1839 4307 4027 184 338 56 0 chr2 57755386 57755457 -192932397 + MIR SINE MIR 55 129 -79 212 256 0 0 chr2 57756357 57756400 -192931454 + (CATA)n Simple_repeat Simple_repeat 1 43 0 2350 84 17 0 chr2 57757000 57757298 -192930556 + AluY SINE Alu 1 303 -8 486 221 25 33 chr2 57758011 57758133 -192929721 - L2 LINE L2 0 3313 3193 1755 131 40 11 chr2 57758308 57758583 -192929271 + AluJb SINE Alu 1 283 -29 465 19 0 0 chr2 57758583 57758637 -192929217 + (CTA)n Simple_repeat Simple_repeat 3 56 0 403 278 82 21 chr2 57760646 57760840 -192927014 - HAL1 LINE L1 -56 2451 2246 1563 235 59 10 chr2 57761044 57761448 -192926406 - L1ME1 LINE L1 -285 5881 5458 1543 203 115 30 chr2 57761454 57761995 -192925859 - L1ME1 LINE L1 -805 5341 4755 234 288 0 0 chr2 57762044 57762124 -192925730 + L1MC4 LINE L1 6635 6714 -1328 2372 93 6 6 chr2 57762283 57762596 -192925258 + AluSq SINE Alu 1 313 0 507 199 61 72 chr2 57762666 57762847 -192925007 - MIR SINE MIR -2 260 82 2974 187 89 101 chr2 57762888 57763829 -192924025 + MER63C DNA MER1_type 1 930 0 29 28 0 0 chr2 57765642 57765678 -192922176 + AT_rich Low_complexity Low_complexity 1 36 0 256 286 107 0 chr2 57766662 57766774 -192921080 - L2 LINE L2 0 3313 3190 192 353 150 8 chr2 57767483 57767616 -192920238 + L2 LINE L2 3121 3272 0 476 286 154 18 chr2 57768051 57768278 -192919576 - MIR SINE MIR -1 261 4 282 233 86 60 chr2 57771874 57771990 -192915864 - MIR SINE MIR -56 206 88 1222 80 219 0 chr2 57773515 57773702 -192914152 + MER30 DNA MER1_type 2 229 -1 227 204 20 20 chr2 57773928 57773977 -192913877 - MER5B DNA MER1_type 0 178 130 849 225 133 58 chr2 57774235 57774582 -192913272 + MER57A LTR ERV1 1 373 -30 312 335 18 18 chr2 57775201 57775365 -192912489 + MER5A DNA MER1_type 1 164 -25 2353 79 10 3 chr2 57775456 57775760 -192912094 + AluSc SINE Alu 1 306 -3 361 313 102 26 chr2 57777751 57778055 -192909799 + L1ME4a LINE L1 4963 5289 -857 592 258 127 84 chr2 57778058 57778803 -192909051 + L1ME4a LINE L1 5318 6119 -2 648 36 0 0 chr2 57779804 57779887 -192907967 + (TC)n Simple_repeat Simple_repeat 1 83 0 180 276 103 0 chr2 57779978 57780036 -192907818 - MIR SINE MIR -164 98 35 204 135 27 0 chr2 57780765 57780802 -192907052 + MIR3 SINE MIR 152 189 -19 1010 152 38 0 chr2 57781391 57781549 -192906305 - AluJb SINE Alu -148 164 1 1797 111 0 4 chr2 57782340 57782584 -192905270 + AluSx SINE Alu 38 280 -32 1797 142 0 0 chr2 57782877 57783131 -192904723 + AluSx SINE Alu 1 254 -58 229 218 51 13 chr2 57783149 57783227 -192904627 + L1ME4a LINE L1 6041 6121 0 218 215 62 31 chr2 57784023 57784088 -192903766 - MER5A DNA MER1_type -6 183 117 21 36 0 0 chr2 57785050 57785078 -192902776 + AT_rich Low_complexity Low_complexity 1 28 0 213 222 0 56 chr2 57785608 57785662 -192902192 + MER91 DNA MER1_type 140 190 -6 466 266 96 30 chr2 57785853 57786052 -192901802 + MIR SINE MIR 5 216 -46 520 243 198 5 chr2 57789804 57790042 -192897812 + MER46C DNA MER2_type 6 319 -19 208 279 66 16 chr2 57790482 57790543 -192897311 - L2 LINE L2 0 3272 3209 595 290 155 26 chr2 57790762 57791360 -192896494 + L2 LINE L2 2552 3312 -1 1054 192 74 0 chr2 57791677 57791880 -192895974 + MER20 DNA MER1_type 2 219 0 714 228 19 0 chr2 57792646 57792808 -192895046 + MER45A DNA AcHobo 1 165 -13 267 370 0 30 chr2 57793229 57793364 -192894490 + MIR SINE MIR 6 136 -126 325 309 52 15 chr2 57793737 57793873 -192893981 + MER5B DNA MER1_type 36 176 -2 398 281 141 21 chr2 57794280 57794472 -192893382 - MIR SINE MIR 0 262 48 217 258 15 15 chr2 57796356 57796422 -192891432 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 299 220 190 0 chr2 57796477 57796577 -192891277 + L2 LINE L2 3195 3313 0 548 233 38 44 chr2 57796678 57796837 -192891017 - L2 LINE L2 -1 3312 3155 2120 124 7 10 chr2 57797573 57797879 -192889975 - AluSx SINE Alu -7 305 1 2064 150 12 18 chr2 57797884 57798223 -192889631 - L1MC1 LINE L1 0 6333 5997 1177 171 22 18 chr2 57799207 57799429 -192888425 + AluJo SINE Alu 77 299 -13 2419 66 3 7 chr2 57799549 57799850 -192888004 + AluY SINE Alu 1 300 -11 360 0 0 0 chr2 57799951 57799991 -192887863 + (TG)n Simple_repeat Simple_repeat 1 40 0 218 229 8 0 chr2 57802323 57802445 -192885409 + (TA)n Simple_repeat Simple_repeat 2 124 0 2086 151 0 0 chr2 57802471 57802769 -192885085 - AluJo SINE Alu -13 299 2 1784 147 42 3 chr2 57802910 57803195 -192884659 - AluJo SINE Alu -16 296 1 999 227 105 32 chr2 57803735 57804048 -192883806 + MER46C DNA MER2_type 2 337 -1 248 0 0 30 chr2 57804505 57804538 -192883316 + (CA)n Simple_repeat Simple_repeat 1 32 0 1024 207 53 8 chr2 57805131 57805397 -192882457 - L1MA4 LINE L1 -11 6289 6012 2286 84 0 0 chr2 57805489 57805774 -192882080 - AluY SINE Alu -26 285 1 26 30 0 0 chr2 57805780 57805813 -192882041 + AT_rich Low_complexity Low_complexity 1 33 0 359 148 16 0 chr2 57806275 57806336 -192881518 + U7 snRNA snRNA 1 62 -1 244 277 50 15 chr2 57806391 57806593 -192881261 + L1ME2 LINE L1 5122 5330 -816 265 237 189 0 chr2 57806613 57806735 -192881119 + L1P5 LINE L1 5403 5547 -607 357 302 23 23 chr2 57806770 57806985 -192880869 + L1ME2 LINE L1 5733 5947 -217 2100 134 0 28 chr2 57807113 57807434 -192880420 + AluSx SINE Alu 1 312 0 362 259 47 65 chr2 57808342 57808512 -192879342 - L1ME4a LINE L1 -234 5887 5721 534 106 22 11 chr2 57809335 57809442 -192878412 - L1MA4A LINE L1 -35 6268 6158 27 81 0 0 chr2 57809564 57809626 -192878228 + AT_rich Low_complexity Low_complexity 1 62 0 2440 159 14 25 chr2 57811090 57811523 -192876331 - MSTA LTR MaLR 0 428 1 1060 301 115 42 chr2 57812615 57813330 -192874524 - L2 LINE L2 -417 2897 2131 1324 286 73 21 chr2 57813411 57813876 -192873978 - L2 LINE L2 -1 3312 2824 1524 172 184 11 chr2 57813934 57814354 -192873500 - MLT1F1 LTR MaLR 0 567 7 9002 225 44 28 chr2 57815920 57818040 -192869814 + L1M3d LINE L1 3 1690 -4963 2149 125 3 10 chr2 57818040 57818352 -192869502 + AluSx SINE Alu 1 310 -2 9002 225 44 28 chr2 57818352 57818807 -192869047 + L1M3d LINE L1 1690 2137 -4516 1155 162 34 20 chr2 57819304 57819508 -192868346 + AluJb SINE Alu 83 289 -23 198 378 44 0 chr2 57820687 57820777 -192867077 - MIR SINE MIR -148 114 21 1350 204 92 3 chr2 57821193 57821477 -192866377 + AluJb SINE Alu 1 309 -3 1275 167 44 4 chr2 57821509 57821736 -192866118 + MER46A DNA MER2_type 1 236 0 211 157 22 19 chr2 57821825 57821878 -192865976 - MIR SINE MIR -63 145 100 957 229 103 33 chr2 57823245 57823471 -192864383 - Charlie2 DNA MER1_type -6 2856 2590 1469 179 82 14 chr2 57823471 57823750 -192864104 + AluJb SINE Alu 1 298 -14 957 229 103 33 chr2 57823750 57823912 -192863942 - Charlie2 DNA MER1_type -272 2590 2441 925 192 41 9 chr2 57823944 57824163 -192863691 + MER33 DNA MER1_type 8 233 -91 1390 192 95 31 chr2 57824254 57824708 -192863146 - Charlie2 DNA MER1_type -520 2342 1860 786 313 19 22 chr2 57824722 57825038 -192862816 - Charlie2 DNA MER1_type -2467 315 1 253 276 162 29 chr2 57825599 57825704 -192862150 + L2 LINE L2 3190 3308 -5 282 255 28 21 chr2 57827261 57827377 -192860477 + MIR3 SINE MIR 63 180 -28 21 36 0 0 chr2 57828322 57828350 -192859504 + AT_rich Low_complexity Low_complexity 1 28 0 1469 133 38 11 chr2 57832690 57832954 -192854900 - L1MA6 LINE L1 -5 6295 6025 1971 154 0 3 chr2 57832972 57833270 -192854584 - AluJb SINE Alu -15 297 1 675 163 0 121 chr2 57833982 57834197 -192853657 + MER53 DNA DNA 1 189 0 661 135 27 0 chr2 57835333 57835444 -192852410 - L1MA6 LINE L1 -22 6278 6165 25 51 0 0 chr2 57836939 57836978 -192850876 + AT_rich Low_complexity Low_complexity 1 39 0 2346 87 20 0 chr2 57837359 57837657 -192850197 + AluSx SINE Alu 1 304 -8 2471 56 0 0 chr2 57838563 57838865 -192848989 + AluY SINE Alu 1 302 -9 343 237 83 18 chr2 57839059 57839228 -192848626 - L1ME4a LINE L1 -2 6119 5940 2139 197 79 17 chr2 57839927 57840662 -192847192 - MER21B LTR ERV1 -7 856 1 1726 136 66 4 chr2 57840878 57841151 -192846703 + AluSx SINE Alu 1 290 -22 8340 116 5 7 chr2 57841266 57842698 -192845156 - L1P3 LINE L1 -3554 2907 1488 5556 36 8 1 chr2 57842850 57843825 -192844029 + L1PA4 LINE L1 4994 5972 -183 612 27 0 0 chr2 57844599 57844673 -192843181 + (GA)n Simple_repeat Simple_repeat 1 74 0 2353 85 7 0 chr2 57845563 57845868 -192841986 - AluY SINE Alu -4 307 1 184 209 0 70 chr2 57845883 57845926 -192841928 + L2 LINE L2 15 54 -3260 373 171 12 24 chr2 57845987 57846069 -192841785 - L1MC5 LINE L1 -48 7913 7833 2175 103 7 13 chr2 57846115 57846425 -192841429 - AluSx SINE Alu -4 308 1 326 108 92 0 chr2 57846469 57846534 -192841320 + L1M4 LINE L1 5538 5608 -576 * 853 141 168 0 chr2 57846532 57846794 -192841060 - L1M4 LINE L1 -656 5528 5215 675 204 96 24 chr2 57846857 57847024 -192840830 + MER97c DNA MER1_type? 1 179 -911 333 292 32 13 chr2 57847188 57847342 -192840512 - L1MC5 LINE L1 -734 7227 7071 521 320 75 40 chr2 57847383 57847699 -192840155 - L1M4 LINE L1 -896 5250 4947 4573 157 16 22 chr2 57847699 57847971 -192839883 - L1MC1 LINE L1 0 6333 6061 1889 158 135 21 chr2 57847971 57848407 -192839447 - LTR45B LTR ERV1 -1 488 3 4573 157 16 22 chr2 57848407 57848981 -192838873 - L1MC1 LINE L1 -272 6061 5492 521 320 75 40 chr2 57848981 57849776 -192838078 - L1M4 LINE L1 -1199 4947 4099 444 267 112 16 chr2 57850038 57850296 -192837558 - L1M4 LINE L1 -2191 3955 3673 294 325 89 16 chr2 57852117 57852240 -192835614 + L2 LINE L2 3141 3272 0 1533 198 128 11 chr2 57853191 57853544 -192834310 - MSTD LTR MaLR -2 394 1 198 0 0 0 chr2 57853792 57853814 -192834040 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 480 198 0 0 chr2 57855392 57855473 -192832381 + MER96 DNA MER1_type? 1 81 -94 2463 218 58 22 chr2 57855476 57856030 -192831824 - MLT1E LTR MaLR 0 593 20 405 298 98 14 chr2 57856038 57856253 -192831601 - MLT1E-int LTR MaLR -2 1369 1137 463 218 223 30 chr2 57857303 57857505 -192830349 - MIR SINE MIR 0 262 22 247 296 0 28 chr2 57859796 57859867 -192827987 - L2 LINE L2 0 3272 3204 231 214 0 0 chr2 57860204 57860246 -192827608 - L2 LINE L2 -8 3264 3223 1498 245 69 32 chr2 57860303 57860797 -192827057 - LTR33 LTR ERVL -9 512 1 236 289 183 0 chr2 57860798 57860902 -192826952 - L2 LINE L2 -173 3099 2977 507 264 100 0 chr2 57861063 57861203 -192826651 - MIR SINE MIR -72 190 37 482 219 21 0 chr2 57861501 57861597 -192826257 - MER94 DNA DNA -36 98 1 1789 181 3 0 chr2 57862361 57862654 -192825200 - AluJb SINE Alu -18 294 1 705 133 0 0 chr2 57862730 57862828 -192825026 - AluJ/FLAM SINE Alu -212 100 3 235 354 24 37 chr2 57864065 57864147 -192823707 - L2 LINE L2 -86 3186 3106 221 330 82 54 chr2 57864344 57864623 -192823231 - L2 LINE L2 -145 3127 2841 513 0 0 0 chr2 57865277 57865334 -192822520 + (CA)n Simple_repeat Simple_repeat 2 58 0 4078 171 36 5 chr2 57865479 57866221 -192821633 - L1MB3 LINE L1 -2 6181 5417 2035 114 17 3 chr2 57867186 57867483 -192820371 + AluSx SINE Alu 1 301 -11 980 8 0 30 chr2 57867829 57867962 -192819892 + (TAGA)n Simple_repeat Simple_repeat 2 130 0 1316 155 0 23 chr2 57868170 57868389 -192819465 - AluJb SINE Alu -14 298 85 2105 119 7 26 chr2 57869521 57869831 -192818023 + AluSx SINE Alu 1 304 -8 720 229 106 5 chr2 57869998 57870186 -192817668 + L1MC5 LINE L1 7719 7925 -36 2053 118 3 23 chr2 57871391 57871695 -192816159 - AluSq SINE Alu -15 298 1 5037 139 20 18 chr2 57872359 57873202 -192814652 - L1PA16 LINE L1 0 6166 5322 1351 151 0 59 chr2 57873202 57873440 -192814414 - AluJb SINE Alu -17 295 72 3226 197 23 13 chr2 57873440 57874125 -192813729 - L1PA16 LINE L1 -817 5329 4638 280 318 68 0 chr2 57874138 57874226 -192813628 - MIR SINE MIR -74 188 95 244 248 99 50 chr2 57874860 57875001 -192812853 + MIR SINE MIR 17 164 -98 868 195 168 0 chr2 57876213 57876398 -192811456 + MER20 DNA MER1_type 1 216 -3 1579 320 108 48 chr2 57877077 57877310 -192810544 - L3 LINE CR1 -8 1569 1351 2215 114 3 0 chr2 57877310 57877618 -192810236 - AluSg1 SINE Alu 0 309 1 1579 320 108 48 chr2 57877618 57878326 -192809528 - L3 LINE CR1 -226 1351 526 1634 198 7 0 chr2 57878326 57878604 -192809250 - AluJo SINE Alu -32 280 1 1579 320 108 48 chr2 57878604 57878959 -192808895 - L3 LINE CR1 -1051 526 194 10254 167 67 16 chr2 57880037 57882891 -192804963 + L1MA9 LINE L1 3038 5747 -565 2329 108 3 0 chr2 57882891 57883198 -192804656 - AluSp SINE Alu -5 308 1 10254 167 67 16 chr2 57883198 57883322 -192804532 + L1MA9 LINE L1 5747 5863 -449 348 24 0 0 chr2 57883322 57883363 -192804491 + (CA)n Simple_repeat Simple_repeat 2 42 0 10254 167 67 16 chr2 57883363 57883499 -192804355 + L1MA9 LINE L1 5863 6309 -3 2846 206 110 26 chr2 57883589 57884401 -192803453 - L1ME2 LINE L1 0 6164 5285 2190 110 0 28 chr2 57884503 57884820 -192803034 - AluSq SINE Alu -5 308 1 1817 182 23 62 chr2 57884956 57885341 -192802513 + MLT1A2 LTR MaLR 1 370 -4 2171 116 10 0 chr2 57886066 57886359 -192801495 - AluSq SINE Alu -17 296 1 369 192 221 0 chr2 57888047 57888151 -192799703 - L2 LINE L2 0 3313 3187 324 0 0 0 chr2 57889650 57889686 -192798168 + (TCC)n Simple_repeat Simple_repeat 3 38 0 2836 7 0 0 chr2 57890911 57891213 -192796641 - AluY SINE Alu -8 303 2 467 249 145 62 chr2 57892876 57893213 -192794641 - MLT1K LTR MaLR -38 550 186 2003 141 10 0 chr2 57893410 57893708 -192794146 + AluSx SINE Alu 1 301 -11 201 94 0 0 chr2 57894491 57894523 -192793331 + (TA)n Simple_repeat Simple_repeat 2 33 0 1323 189 28 32 chr2 57894523 57894808 -192793046 - AluJo SINE Alu -28 284 1 1551 174 0 63 chr2 57895686 57895985 -192791869 + AluJo SINE Alu 1 280 -32 189 0 0 0 chr2 57896926 57896947 -192790907 + (T)n Simple_repeat Simple_repeat 1 21 0 2183 107 7 0 chr2 57896955 57897254 -192790600 + AluSp SINE Alu 1 301 -12 1475 168 114 0 chr2 57897260 57897540 -192790314 + AluJo SINE Alu 1 312 0 1634 97 0 0 chr2 57898021 57898227 -192789627 + AluSq SINE Alu 1 206 -107 339 45 0 0 chr2 57898227 57898271 -192789583 + AluSq SINE Alu 248 291 -12 350 287 148 9 chr2 57898925 57899040 -192788814 + L2 LINE L2 3142 3272 0 227 381 76 0 chr2 57900447 57900552 -192787302 + L2 LINE L2 3160 3272 0 749 188 38 6 chr2 57901082 57901242 -192786612 - L1MA5A LINE L1 -4 6293 6129 439 203 101 48 chr2 57903148 57903268 -192784586 - L3 LINE CR1 -103 1474 1351 2187 113 3 7 chr2 57903268 57903570 -192784284 + AluSx SINE Alu 1 301 -11 439 203 101 48 chr2 57903570 57903614 -192784240 - L3 LINE CR1 -226 1351 1311 270 280 30 53 chr2 57903850 57903982 -192783872 - MER5B DNA MER1_type -49 129 1 203 303 217 0 chr2 57904096 57904248 -192783606 - MIR SINE MIR -2 260 76 2156 115 0 13 chr2 57904963 57905268 -192782586 - AluSq SINE Alu -7 306 6 22 25 0 25 chr2 57906234 57906261 -192781593 + AT_rich Low_complexity Low_complexity 1 28 -11 2357 93 0 0 chr2 57906261 57906550 -192781304 + AluSx SINE Alu 1 289 -23 22 25 0 25 chr2 57906550 57906562 -192781292 + AT_rich Low_complexity Low_complexity 28 39 0 662 285 6 0 chr2 57907548 57907720 -192780134 + MIR SINE MIR 57 229 -33 442 242 86 13 chr2 57908227 57908495 -192779359 + L1P4 LINE L1 5173 5461 -704 231 302 45 70 chr2 57909227 57909469 -192778385 + L3 LINE CR1 1342 1577 0 208 158 26 0 chr2 57910012 57910050 -192777804 + (TG)n Simple_repeat Simple_repeat 2 40 0 262 185 62 0 chr2 57910078 57910143 -192777711 - HsTC2 DNA Tc2 -1801 97 29 954 171 98 4 chr2 57911118 57911364 -192776490 - L1MA7 LINE L1 -5 6286 6018 344 262 0 0 chr2 57911371 57911455 -192776399 - MIR SINE MIR -107 155 72 2120 124 0 0 chr2 57913203 57913493 -192774361 - AluSx SINE Alu -22 290 1 466 169 344 13 chr2 57914667 57914821 -192773033 - L1MB7 LINE L1 -16 6168 5964 908 201 98 5 chr2 57915005 57915209 -192772645 + MER58A DNA MER1_type 1 223 -1 194 299 141 51 chr2 57915892 57916069 -192771785 - MIR SINE MIR -7 255 63 1836 176 10 3 chr2 57916069 57916375 -192771479 + AluJo SINE Alu 1 308 -4 325 236 94 47 chr2 57916665 57916771 -192771083 + MIR SINE MIR 30 140 -68 576 126 117 18 chr2 57917300 57917411 -192770443 + FLAM_C SINE Alu 12 133 -10 233 283 0 0 chr2 57917451 57917511 -192770343 - MIR SINE MIR -156 106 47 397 261 120 48 chr2 57917860 57918024 -192769830 + L1ME4a LINE L1 5764 5915 -206 2522 70 0 16 chr2 57918024 57918339 -192769515 + AluY SINE Alu 1 310 -1 397 261 120 48 chr2 57918339 57918507 -192769347 + L1ME4a LINE L1 5915 6120 -1 5309 215 45 11 chr2 57919472 57920033 -192767821 + L1MB7 LINE L1 3648 4189 -1957 4397 157 63 30 chr2 57920033 57920199 -192767655 - MER6 DNA MER2_type 0 865 706 2066 130 17 0 chr2 57920199 57920492 -192767362 + AluSx SINE Alu 1 298 -14 4397 157 63 30 chr2 57920492 57920804 -192767050 - MER6 DNA MER2_type -159 706 406 222 37 0 0 chr2 57920804 57920831 -192767023 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 4397 157 63 30 chr2 57920831 57921188 -192766666 - MER6 DNA MER2_type -459 406 1 5309 215 45 11 chr2 57921188 57921973 -192765881 + L1MB7 LINE L1 4189 5039 -1107 687 253 35 17 chr2 57921982 57922156 -192765698 - AluJb SINE Alu -1 311 135 3607 146 60 23 chr2 57922157 57922925 -192764929 + L1MB7 LINE L1 5031 5834 -350 1503 186 46 12 chr2 57922925 57923253 -192764601 + MER44D DNA MER2_type 1 609 0 3607 146 60 23 chr2 57923253 57923373 -192764481 + L1MB7 LINE L1 5834 5948 -236 2189 103 0 42 chr2 57925352 57925664 -192762190 - AluSx SINE Alu -13 299 1 237 263 88 82 chr2 57927386 57927580 -192760274 + MIR SINE MIR 49 243 -19 329 265 83 15 chr2 57932572 57932704 -192755150 - MIR3 SINE MIR 0 208 68 306 0 0 0 chr2 57933150 57933184 -192754670 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 480 239 200 34 chr2 57933451 57933656 -192754198 - MIR SINE MIR -4 258 20 2375 82 3 7 chr2 57934250 57934543 -192753311 + AluSp SINE Alu 1 292 -21 1829 141 10 33 chr2 57937148 57937453 -192750401 + AluJo SINE Alu 1 298 -14 2273 114 0 3 chr2 57938052 57938358 -192749496 - AluSx SINE Alu -7 305 1 750 222 124 16 chr2 57941323 57941517 -192746337 + MER58C DNA MER1_type 1 215 0 2271 90 0 3 chr2 57942418 57942706 -192745148 + AluSq SINE Alu 1 287 -26 1814 121 97 0 chr2 57949137 57949427 -192738427 + MER1B DNA MER1_type 1 318 -21 786 217 6 0 chr2 57950391 57950557 -192737297 + MER5A DNA MER1_type 2 168 -21 421 232 210 65 chr2 57950799 57951078 -192736776 + L2 LINE L2 2910 3252 -61 5563 64 10 0 chr2 57951078 57951761 -192736093 + LTR8 LTR ERV1 1 690 -1 421 232 210 65 chr2 57951761 57951834 -192736020 + L2 LINE L2 3252 3313 0 335 252 201 0 chr2 57952234 57952373 -192735481 + MIR SINE MIR 96 262 0 1041 184 4 71 chr2 58153348 58153576 -192534278 + AluJo SINE Alu 59 270 -42 2137 95 28 0 chr2 58153576 58153859 -192533995 - AluY SINE Alu -20 291 1 1041 184 4 71 chr2 58153859 58153885 -192533969 + AluJo SINE Alu 270 296 -16 840 280 52 13 chr2 58153932 58154239 -192533615 + L1ME4a LINE L1 5567 5885 -236 636 66 55 0 chr2 58154375 58154466 -192533388 + L1MA9 LINE L1 6158 6253 -59 1334 180 16 20 chr2 58154466 58154711 -192533143 + AluJo SINE Alu 1 244 -68 286 240 120 10 chr2 58154732 58154832 -192533022 - MIR SINE MIR -121 141 31 1437 184 40 7 chr2 58154999 58155277 -192532577 - MLT2D LTR ERVL -123 291 5 561 187 89 0 chr2 58155849 58155972 -192531882 - L1ME3A LINE L1 0 6170 6037 1736 166 0 24 chr2 58155972 58156261 -192531593 + AluJo SINE Alu 1 282 -30 712 271 75 24 chr2 58156392 58156684 -192531170 - L1ME LINE L1 -413 5757 5451 1879 68 141 0 chr2 58157722 58157997 -192529857 - AluSq SINE Alu 0 310 1 1655 148 0 4 chr2 58158244 58158494 -192529360 + AluSx SINE Alu 50 298 -14 447 134 30 0 chr2 58158782 58158849 -192529005 + MER21B LTR ERV1 12 80 -783 2669 219 87 37 chr2 58158881 58159286 -192528568 + MER21B LTR ERV1 19 402 -461 870 140 0 22 chr2 58159286 58159422 -192528432 - FLAM_C SINE Alu 0 133 1 2669 219 87 37 chr2 58159422 58159774 -192528080 + MER21B LTR ERV1 402 814 -49 1641 165 3 21 chr2 58159780 58160071 -192527783 - AluJo SINE Alu -26 286 1 270 114 91 0 chr2 58160133 58160177 -192527677 - MLT2D LTR ERVL 0 414 367 340 20 0 0 chr2 58160195 58160240 -192527614 + MLT2C1 LTR ERVL 350 386 -11 381 141 31 0 chr2 58160374 58160438 -192527416 + Alu SINE Alu 235 300 -2 364 324 56 29 chr2 58160531 58160726 -192527128 - MIR SINE MIR -33 229 32 454 147 0 0 chr2 58160994 58161069 -192526785 + MER116 DNA Mariner 6 80 0 2239 82 14 0 chr2 58161118 58161438 -192526416 - AluSq SINE Alu 0 324 1 273 240 128 76 chr2 58161514 58161624 -192526230 - L1MC4a LINE L1 -89 6032 5929 405 39 0 0 chr2 58161624 58161675 -192526179 + (CA)n Simple_repeat Simple_repeat 2 52 0 273 240 128 76 chr2 58161675 58161814 -192526040 - L1MC4a LINE L1 -192 5929 5768 1154 197 50 141 chr2 58161919 58162422 -192525432 - L1ME3 LINE L1 -67 6095 5639 1532 187 58 3 chr2 58163100 58163394 -192524460 - AluJo SINE Alu -2 310 1 502 303 125 34 chr2 58163394 58163443 -192524411 + L2 LINE L2 2642 2685 -628 1920 131 10 0 chr2 58163443 58163734 -192524120 - AluSx SINE Alu -18 294 1 502 303 125 34 chr2 58163734 58164101 -192523753 + L2 LINE L2 2685 3101 -212 26 50 0 0 chr2 58164102 58164142 -192523712 + AT_rich Low_complexity Low_complexity 1 40 0 1020 234 75 16 chr2 58164168 58164420 -192523434 - MLT1J LTR MaLR -7 504 238 556 274 74 86 chr2 58164484 58164782 -192523072 + L1MC5 LINE L1 7186 7318 -643 4545 99 49 87 chr2 58164782 58165598 -192522256 - LTR1 LTR ERV1 0 785 1 556 274 74 86 chr2 58165598 58165967 -192521887 + L1MC5 LINE L1 7318 7690 -271 2056 85 8 0 chr2 58165979 58166239 -192521615 + AluSx SINE Alu 11 272 -40 4418 218 51 12 chr2 58166339 58166720 -192521134 + L1MB7 LINE L1 3827 4192 -1954 4865 146 63 31 chr2 58166720 58166886 -192520968 - MER6 DNA MER2_type 0 865 706 2037 133 17 0 chr2 58166886 58167179 -192520675 + AluSx SINE Alu 1 298 -14 4865 146 63 31 chr2 58167179 58167492 -192520362 - MER6 DNA MER2_type -159 706 405 222 37 0 0 chr2 58167492 58167519 -192520335 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 4865 146 63 31 chr2 58167519 58167876 -192519978 - MER6 DNA MER2_type -460 405 1 4418 218 51 12 chr2 58167876 58168661 -192519193 + L1MB7 LINE L1 4192 5039 -1107 741 250 35 17 chr2 58168670 58168842 -192519012 - AluJb SINE Alu -1 311 137 4228 147 54 34 chr2 58168845 58169613 -192518241 + L1MB7 LINE L1 5031 5821 -363 1697 179 43 12 chr2 58169613 58169942 -192517912 + MER44D DNA MER2_type 1 609 0 4228 147 54 34 chr2 58169942 58170195 -192517659 + L1MB7 LINE L1 5821 6068 -116 259 278 53 68 chr2 58170228 58170361 -192517493 + L2 LINE L2 3142 3272 0 25 31 0 0 chr2 58171606 58171638 -192516216 + AT_rich Low_complexity Low_complexity 1 32 0 197 248 85 70 chr2 58171911 58172040 -192515814 + MIR SINE MIR 119 249 -13 222 273 76 0 chr2 58172467 58172533 -192515321 - MIR SINE MIR -32 230 160 827 294 20 8 chr2 58173992 58174240 -192513614 + MIR SINE MIR 12 262 0 378 254 136 23 chr2 58175424 58175644 -192512210 + L1ME4a LINE L1 5873 6117 -4 292 273 18 73 chr2 58175938 58176048 -192511806 - L2 LINE L2 -1 3271 3168 1397 209 41 29 chr2 58176646 58176962 -192510892 - MER58B DNA MER1_type 0 341 22 2228 79 38 0 chr2 58177181 58177471 -192510383 + AluSp SINE Alu 1 301 -12 2016 194 20 53 chr2 58177504 58177974 -192509880 + L1MA10 LINE L1 5821 6279 -55 242 119 0 164 chr2 58178017 58178043 -192509811 + L1MA10 LINE L1 6266 6276 -58 2194 114 0 0 chr2 58178043 58178340 -192509514 - AluSx SINE Alu -15 297 1 242 119 0 164 chr2 58178340 58178380 -192509474 + L1MA10 LINE L1 6276 6321 -13 2035 128 0 28 chr2 58178382 58178702 -192509152 - AluSx SINE Alu -1 311 1 2022 123 10 10 chr2 58178703 58178996 -192508858 - AluSx SINE Alu -19 293 1 23 0 0 0 chr2 58179071 58179094 -192508760 + AT_rich Low_complexity Low_complexity 1 23 0 239 200 57 62 chr2 58179114 58179138 -192508716 - L1ME LINE L1 -708 5454 5431 1874 178 0 6 chr2 58179138 58179452 -192508402 - AluJb SINE Alu 0 312 1 239 200 57 62 chr2 58179452 58179563 -192508291 - L1ME LINE L1 -731 5431 5317 2285 112 0 0 chr2 58179573 58179869 -192507985 - AluSx SINE Alu -10 302 7 1366 193 7 40 chr2 58180035 58180335 -192507519 + AluJo SINE Alu 2 291 -21 2315 87 0 0 chr2 58180873 58181161 -192506693 - AluSq SINE Alu -21 292 5 204 125 0 0 chr2 58181749 58181781 -192506073 + (A)n Simple_repeat Simple_repeat 1 32 0 2053 112 7 14 chr2 58182304 58182599 -192505255 - AluSx SINE Alu -19 293 1 238 67 0 0 chr2 58183054 58183084 -192504770 - HSMAR1 DNA Mariner 0 1287 1258 5484 186 20 36 chr2 58183185 58184307 -192503547 - Charlie1a DNA MER1_type -351 1104 1 655 213 16 0 chr2 58185242 58185369 -192502485 - MER20 DNA MER1_type -2 217 89 1793 161 50 7 chr2 58185414 58185712 -192502142 + AluJo SINE Alu 1 311 -1 261 0 0 0 chr2 58185886 58185915 -192501939 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2434 66 7 0 chr2 58185917 58186219 -192501635 - AluY SINE Alu -7 304 1 183 80 0 0 chr2 58186219 58186244 -192501610 + (T)n Simple_repeat Simple_repeat 1 25 0 287 194 86 54 chr2 58186405 58186498 -192501356 + MIR SINE MIR 88 183 -79 216 0 0 0 chr2 58186687 58186711 -192501143 + (A)n Simple_repeat Simple_repeat 1 24 0 342 251 17 100 chr2 58187228 58187368 -192500486 - L1ME LINE L1 -322 5799 5683 2331 67 0 0 chr2 58187368 58187674 -192500180 - AluY SINE Alu 0 306 1 342 251 17 100 chr2 58187674 58187763 -192500091 - L1ME LINE L1 -438 5683 5588 22 0 0 0 chr2 58188230 58188252 -192499602 + AT_rich Low_complexity Low_complexity 1 22 0 261 312 181 7 chr2 58188901 58189039 -192498815 - MIR3 SINE MIR -8 200 39 1910 152 0 40 chr2 58189365 58189687 -192498167 + AluJo SINE Alu 1 309 -3 8489 149 15 26 chr2 58189688 58190481 -192497373 + L1PB1 LINE L1 3604 4404 -1747 180 0 0 0 chr2 58190481 58190501 -192497353 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 8489 149 15 26 chr2 58190501 58191493 -192496361 + L1PB1 LINE L1 4404 5405 -746 2525 102 12 77 chr2 58191493 58191535 -192496319 + THE1C LTR MaLR 1 44 -331 2160 123 20 0 chr2 58191535 58191835 -192496019 - AluSx SINE Alu -6 306 1 2525 102 12 77 chr2 58191835 58192151 -192495703 + THE1C LTR MaLR 44 333 -42 2356 73 0 10 chr2 58192151 58192452 -192495402 - AluY SINE Alu -13 298 1 2525 102 12 77 chr2 58192452 58192493 -192495361 + THE1C LTR MaLR 333 375 0 8489 149 15 26 chr2 58192493 58192896 -192494958 + L1PB1 LINE L1 5405 5762 -389 345 24 0 0 chr2 58192896 58192938 -192494916 + (CA)n Simple_repeat Simple_repeat 2 43 0 8489 149 15 26 chr2 58192938 58193324 -192494530 + L1PB1 LINE L1 5762 6151 0 902 181 34 23 chr2 58193371 58193548 -192494306 - AluJb SINE Alu -4 308 130 444 294 82 31 chr2 58194555 58194810 -192493044 - MER102a DNA MER1_type -36 294 27 622 244 70 19 chr2 58194962 58195118 -192492736 + MIR SINE MIR 1 164 -98 1641 176 33 4 chr2 58195183 58195455 -192492399 - AluJb SINE Alu -32 280 1 242 164 18 0 chr2 58196158 58196213 -192491641 + CT-rich Low_complexity Low_complexity 3 58 0 1905 144 3 10 chr2 58196216 58196514 -192491340 - AluJb SINE Alu -16 296 1 377 252 201 0 chr2 58197152 58197291 -192490563 - MIR SINE MIR 0 262 96 527 229 210 65 chr2 58197691 58197764 -192490090 - L2 LINE L2 0 3313 3252 5801 66 10 0 chr2 58197764 58198447 -192489407 - LTR8 LTR ERV1 -1 690 1 527 229 210 65 chr2 58198447 58198726 -192489128 - L2 LINE L2 -61 3252 2910 843 217 6 0 chr2 58198968 58199134 -192488720 - MER5A DNA MER1_type -21 168 2 1776 117 100 7 chr2 58200098 58200389 -192487465 - MER1B DNA MER1_type -21 318 1 2248 90 0 3 chr2 58206658 58206946 -192480908 - AluSq SINE Alu -26 287 1 790 227 124 16 chr2 58207847 58208041 -192479813 - MER58C DNA MER1_type 0 215 1 423 303 149 5 chr2 58208751 58208959 -192478895 - MER102b DNA MER1_type -13 328 91 2260 114 0 3 chr2 58210514 58210821 -192477033 + AluSx SINE Alu 1 306 -6 1823 141 10 30 chr2 58211326 58211630 -192476224 - AluJo SINE Alu -14 298 1 23 0 0 0 chr2 58213550 58213573 -192474281 + AT_rich Low_complexity Low_complexity 1 23 0 2269 85 3 14 chr2 58214261 58214556 -192473298 - AluSp SINE Alu -21 292 1 545 239 200 34 chr2 58215150 58215355 -192472499 + MIR SINE MIR 20 258 -4 180 183 17 83 chr2 58215478 58215538 -192472316 + L3 LINE CR1 932 987 -590 306 0 0 0 chr2 58215622 58215656 -192472198 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 370 265 83 15 chr2 58216102 58216234 -192471620 + MIR3 SINE MIR 68 208 0 1834 173 10 3 chr2 58216374 58216675 -192471179 - AluJo SINE Alu -9 303 1 267 296 142 45 chr2 58216675 58216851 -192471003 + MIR SINE MIR 63 255 -7 986 196 98 5 chr2 58217534 58217738 -192470116 - MER58A DNA MER1_type -1 223 1 480 169 344 13 chr2 58217922 58218076 -192469778 + L1MB7 LINE L1 5964 6168 -16 2094 124 0 0 chr2 58219250 58219540 -192468314 + AluSx SINE Alu 1 290 -22 369 262 0 0 chr2 58221154 58221238 -192466616 + MIR SINE MIR 72 155 -107 974 171 98 4 chr2 58221245 58221491 -192466363 + L1MA7 LINE L1 6018 6286 -5 222 304 0 0 chr2 58221535 58221604 -192466250 + MIR SINE MIR 187 255 -7 2294 80 10 0 chr2 58221862 58222163 -192465691 - AluY SINE Alu -7 304 1 361 236 94 47 chr2 58222510 58222616 -192465238 + MIR SINE MIR 30 140 -68 616 126 117 18 chr2 58223145 58223256 -192464598 + FLAM_C SINE Alu 12 133 -10 252 283 0 0 chr2 58223296 58223356 -192464498 - MIR SINE MIR -156 106 47 428 264 120 48 chr2 58223705 58223869 -192463985 + L1ME4a LINE L1 5764 5915 -206 2460 76 0 16 chr2 58223869 58224184 -192463670 + AluY SINE Alu 1 310 -1 428 264 120 48 chr2 58224184 58224352 -192463502 + L1ME4a LINE L1 5915 6120 -1 822 184 6 12 chr2 58225317 58225480 -192462374 + L1M4 LINE L1 3648 3809 -2337 1397 92 11 0 chr2 58225674 58225859 -192461995 - AluSp SINE Alu -126 187 1 271 246 15 0 chr2 58225876 58225941 -192461913 + L2 LINE L2 3244 3309 -4 201 121 0 0 chr2 58226348 58226381 -192461473 + (TG)n Simple_repeat Simple_repeat 2 34 0 238 265 43 0 chr2 58226629 58226746 -192461108 + (TA)n Simple_repeat Simple_repeat 1 122 0 1696 217 66 3 chr2 58227376 58227726 -192460128 + MLT1A2 LTR MaLR 1 372 -2 654 296 83 43 chr2 58227741 58228089 -192459765 - L2 LINE L2 -4 3309 2948 2151 121 3 3 chr2 58228371 58228678 -192459176 + AluSx SINE Alu 1 307 -5 21 36 0 0 chr2 58228721 58228749 -192459105 + AT_rich Low_complexity Low_complexity 1 28 0 436 132 55 44 chr2 58228749 58228840 -192459014 - L1MC3 LINE L1 -105 7680 7589 906 163 0 131 chr2 58228840 58229085 -192458769 - AluJb SINE Alu -13 299 87 1856 154 15 39 chr2 58229099 58229376 -192458478 - L1MC3 LINE L1 -215 7570 7301 2317 82 10 0 chr2 58229376 58229669 -192458185 + AluSp SINE Alu 1 296 -17 1856 154 15 39 chr2 58229669 58229729 -192458125 - L1MC3 LINE L1 -484 7301 7241 316 320 35 102 chr2 58230128 58230472 -192457382 - L2 LINE L2 -20 3252 2932 848 124 0 0 chr2 58230537 58230650 -192457204 + AluJb SINE Alu 189 301 -11 282 206 47 91 chr2 58230650 58230769 -192457085 + MER5A DNA MER1_type 63 178 0 457 282 214 22 chr2 58230815 58231170 -192456684 - L2 LINE L2 -665 2649 2227 231 205 0 0 chr2 58231524 58231563 -192456291 + L2 LINE L2 3221 3259 -13 3192 209 77 64 chr2 58231686 58232860 -192454994 - L1MC5 LINE L1 -31 7930 6742 201 296 0 0 chr2 58233593 58233647 -192454207 + L3b LINE CR1 1199 1252 -331 2075 138 0 7 chr2 58233801 58234106 -192453748 + AluJb SINE Alu 1 303 -9 2095 130 0 0 chr2 58234533 58234841 -192453013 + AluSx SINE Alu 1 308 0 321 262 289 21 chr2 58236009 58236196 -192451658 - MIR SINE MIR -12 250 14 2185 106 0 0 chr2 58238191 58238500 -192449354 + AluSx SINE Alu 1 309 0 1571 215 28 30 chr2 58238872 58239294 -192448560 - MLT1D LTR MaLR -2 503 1 191 262 16 0 chr2 58239620 58239681 -192448173 - L3b LINE CR1 -384 1199 1138 907 102 8 0 chr2 58239866 58239994 -192447860 - FLAM_C SINE Alu -6 137 9 503 223 10 0 chr2 58240192 58240295 -192447559 + MIR SINE MIR 70 173 -89 663 227 149 21 chr2 58240337 58240531 -192447323 - MIR SINE MIR -34 228 10 2212 135 0 0 chr2 58240637 58240949 -192446905 - AluSx SINE Alu 0 312 1 471 211 39 0 chr2 58241419 58241523 -192446331 + L1ME3A LINE L1 5854 5961 -209 439 231 47 99 chr2 58241572 58241784 -192446070 + L1ME3A LINE L1 5963 6163 -7 264 184 0 20 chr2 58241843 58241892 -192445962 - MER5A DNA MER1_type -110 79 32 1729 189 3 0 chr2 58241959 58242250 -192445604 + AluJo SINE Alu 1 292 -20 383 286 32 32 chr2 58244902 58245028 -192442826 - L2 LINE L2 -1 3312 3187 1857 142 66 0 chr2 58245766 58246054 -192441800 - AluJb SINE Alu -5 307 1 6451 174 117 31 chr2 58246178 58247424 -192440430 + MER45R DNA AcHobo 1 1391 -190 210 71 0 0 chr2 58247424 58247452 -192440402 + (TTATA)n Simple_repeat Simple_repeat 5 32 0 6451 174 117 31 chr2 58247452 58247660 -192440194 + MER45R DNA AcHobo 1391 1580 -1 6327 126 17 40 chr2 58248200 58249259 -192438595 + L1PA14 LINE L1 4351 5433 -728 1973 148 0 14 chr2 58249259 58249556 -192438298 + AluSx SINE Alu 1 293 -19 2313 103 0 0 chr2 58249556 58249856 -192437998 + AluY SINE Alu 1 301 -10 2235 104 3 19 chr2 58249859 58250166 -192437688 + AluSp SINE Alu 3 304 -9 6327 126 17 40 chr2 58250166 58250949 -192436905 + L1PA14 LINE L1 5434 6157 -4 181 271 85 17 chr2 58251260 58251319 -192436535 + L2 LINE L2 3160 3222 -50 261 346 103 7 chr2 58251372 58251508 -192436346 - MIR SINE MIR -78 184 36 650 150 0 18 chr2 58251692 58251805 -192436049 - AluJ SINE Alu -17 295 185 * 727 148 189 0 chr2 58251797 58251919 -192435935 - AluJ SINE Alu -165 147 3 651 106 0 0 chr2 58252634 58252719 -192435135 + AluSg/x SINE Alu 213 297 -15 719 236 31 62 chr2 58252749 58253041 -192434813 + L1MC5 LINE L1 7631 7913 -48 2284 112 0 0 chr2 58253041 58253337 -192434517 + AluSx SINE Alu 1 296 -16 1770 174 0 13 chr2 58253359 58253664 -192434190 + AluJb SINE Alu 9 309 -3 35 0 0 0 chr2 58253714 58253749 -192434105 + AT_rich Low_complexity Low_complexity 1 35 0 2035 155 0 0 chr2 58253752 58254061 -192433793 + AluSx SINE Alu 1 309 -3 727 82 0 0 chr2 58254061 58254158 -192433696 - L1MA1 LINE L1 -8 6294 6198 393 320 8 8 chr2 58254391 58254513 -192433341 - MIR3 SINE MIR -22 186 65 241 175 0 127 chr2 58254618 58254681 -192433173 - MER66A LTR ERV1 -12 466 412 * 2496 179 36 2 chr2 58254658 58255126 -192432728 - MER41B LTR ERV1 -38 597 114 744 153 18 102 chr2 58255700 58255809 -192432045 + MER33 DNA MER1_type 1 110 -2462 664 189 25 16 chr2 58255809 58255931 -192431923 + FLAM_C SINE Alu 3 125 -8 744 153 18 102 chr2 58255931 58256016 -192431838 + MER33 DNA MER1_type 110 160 -2412 2184 126 3 0 chr2 58256016 58256326 -192431528 - AluSx SINE Alu -1 311 1 744 153 18 102 chr2 58256326 58256372 -192431482 + MER33 DNA MER1_type 160 208 -103 1383 186 126 27 chr2 58256404 58256769 -192431085 - L1ME1 LINE L1 -5 6161 5761 4124 138 44 6 chr2 58256771 58257451 -192430403 + MER50 LTR ERV1 1 706 -28 390 154 122 32 chr2 58257492 58257615 -192430239 + MER33 DNA MER1_type 189 322 -2 277 299 45 109 chr2 58257783 58257984 -192429870 - L2 LINE L2 -85 3187 3000 1129 187 117 61 chr2 58259132 58259458 -192428396 - MER2 DNA MER2_type 0 344 1 23 0 0 0 chr2 58259828 58259851 -192428003 + AT_rich Low_complexity Low_complexity 1 23 0 226 321 25 12 chr2 58259888 58259969 -192427885 + MIR3 SINE MIR 82 163 -45 201 291 225 20 chr2 58260470 58260621 -192427233 - L2 LINE L2 -284 2988 2807 316 278 222 0 chr2 58260986 58261148 -192426706 + L1ME LINE L1 5518 5715 -406 1507 165 113 9 chr2 58261151 58261478 -192426376 - MER46B DNA MER2_type 0 236 1 245 245 132 75 chr2 58263104 58263263 -192424591 + MER5A DNA MER1_type 18 185 -4 306 0 0 0 chr2 58263636 58263670 -192424184 + (CA)n Simple_repeat Simple_repeat 2 35 0 24 0 0 0 chr2 58264663 58264687 -192423167 + AT_rich Low_complexity Low_complexity 1 24 0 1589 162 53 33 chr2 58266518 58266820 -192421034 - AluJo SINE Alu -4 308 1 180 323 0 40 chr2 58268064 58268163 -192419691 + MIR SINE MIR 167 261 -1 21 0 0 0 chr2 58269890 58269911 -192417943 + AT_rich Low_complexity Low_complexity 1 21 0 693 124 19 9 chr2 58269911 58270016 -192417838 - U6 snRNA snRNA 0 107 2 2327 86 3 0 chr2 58270016 58270308 -192417546 - AluSc SINE Alu -16 293 1 23 54 0 0 chr2 58270859 58270896 -192416958 + AT_rich Low_complexity Low_complexity 1 37 0 301 231 167 27 chr2 58270980 58271166 -192416688 + L1ME4a LINE L1 5257 5468 -2340 921 230 110 65 chr2 58271333 58271794 -192416060 + L1ME4a LINE L1 5474 5970 -151 2180 116 0 3 chr2 58271794 58272097 -192415757 + AluSx SINE Alu 1 302 -10 921 230 110 65 chr2 58272097 58272234 -192415620 + L1ME4a LINE L1 5970 6099 -22 307 329 0 12 chr2 58272317 58272399 -192415455 - MIR SINE MIR -83 125 45 287 282 153 16 chr2 58273580 58273704 -192414150 + MIR SINE MIR 72 212 -50 3818 213 65 53 chr2 58273829 58275955 -192411899 + L1MC4 LINE L1 4125 7515 -293 1663 149 51 0 chr2 58276231 58276507 -192411347 + AluJb SINE Alu 11 300 -12 1050 111 37 6 chr2 58276954 58277116 -192410738 - BC200 scRNA scRNA -33 167 1 304 237 252 22 chr2 58277151 58277286 -192410568 - MIR3 SINE MIR -1 207 42 841 336 162 44 chr2 58277729 58278390 -192409464 + L2 LINE L2 163 745 -2569 306 0 0 0 chr2 58278390 58278424 -192409430 + (CA)n Simple_repeat Simple_repeat 2 35 0 841 336 162 44 chr2 58278424 58279426 -192408428 + L2 LINE L2 745 2022 -1292 482 298 76 57 chr2 58279440 58279756 -192408098 + L2 LINE L2 2202 2523 -791 23 86 0 0 chr2 58280141 58280199 -192407655 + AT_rich Low_complexity Low_complexity 1 58 0 238 239 183 28 chr2 58284371 58284442 -192403412 - MIR SINE MIR -176 86 5 1536 185 23 80 chr2 58284442 58284832 -192403022 + MLT1A2 LTR MaLR 7 374 0 370 309 162 0 chr2 58285973 58286109 -192401745 + MIR SINE MIR 25 182 -80 207 261 163 33 chr2 58286127 58286219 -192401635 - MIR SINE MIR -148 114 11 465 243 21 36 chr2 58286426 58286566 -192401288 - MIR SINE MIR -9 253 116 610 332 107 11 chr2 58286621 58286994 -192400860 + L1ME2 LINE L1 37 445 -5951 691 209 52 13 chr2 58287208 58287361 -192400493 + MER58B DNA MER1_type 182 340 -1 470 246 103 68 chr2 58287363 58287580 -192400274 + L1ME2 LINE L1 649 857 -5539 2020 140 7 0 chr2 58287580 58287872 -192399982 - AluSx SINE Alu -18 294 1 470 246 103 68 chr2 58287872 58288239 -192399615 + L1ME2 LINE L1 857 1315 -5081 1606 180 3 49 chr2 58288239 58288566 -192399288 + AluJo SINE Alu 1 312 0 470 246 103 68 chr2 58288566 58288737 -192399117 + L1ME2 LINE L1 1315 1478 -4918 1798 187 25 25 chr2 58288838 58289232 -192398622 - MER82 DNA MER2_type 0 653 188 1429 137 30 4 chr2 58289232 58289494 -192398360 - L1MA4 LINE L1 0 6300 6032 1798 187 25 25 chr2 58289494 58289656 -192398198 - MER82 DNA MER2_type -465 188 28 1734 174 3 7 chr2 58289714 58290012 -192397842 + AluJo SINE Alu 3 299 -13 1199 268 39 48 chr2 58290020 58290610 -192397244 + L1ME2 LINE L1 1627 2211 -4185 2700 219 119 86 chr2 58290615 58291813 -192396041 + L1ME2 LINE L1 2644 3901 -2314 2196 116 6 6 chr2 58291813 58292124 -192395730 + AluSx SINE Alu 1 311 -1 2700 219 119 86 chr2 58292124 58292374 -192395480 + L1ME2 LINE L1 3901 4141 -2074 298 258 26 58 chr2 58292406 58292561 -192395293 + L1ME2 LINE L1 4239 4388 -1827 1260 280 90 60 chr2 58293733 58294522 -192393332 + L2 LINE L2 2217 3023 -290 1032 184 14 52 chr2 58294614 58294761 -192393093 + AluJo SINE Alu 1 139 -173 2863 62 3 0 chr2 58294761 58295115 -192392739 - THE1A LTR MaLR 0 355 1 1032 184 14 52 chr2 58295115 58295179 -192392675 + AluJo SINE Alu 139 204 -108 1475 249 32 16 chr2 58295368 58295746 -192392108 + LTR40b LTR ERVL 64 447 -15 2904 214 61 20 chr2 58295746 58297134 -192390720 + L1ME2 LINE L1 4618 6066 -167 258 125 0 0 chr2 58297183 58297223 -192390631 + MER3 DNA MER1_type 10 49 -160 376 211 32 21 chr2 58297228 58297323 -192390531 + L1ME2 LINE L1 6129 6224 -9 296 210 42 70 chr2 58297355 58297498 -192390356 + L1MC5 LINE L1 7453 7591 -370 1956 126 35 0 chr2 58297548 58297833 -192390021 + AluSq SINE Alu 1 295 -18 21 71 0 0 chr2 58298247 58298289 -192389565 + AT_rich Low_complexity Low_complexity 1 42 0 505 260 131 91 chr2 58299522 58300096 -192387758 + L1M4 LINE L1 4747 5343 -803 845 279 37 17 chr2 58300165 58300493 -192387361 + L1P2 LINE L1 5477 5813 -341 301 323 45 65 chr2 58300788 58300943 -192386911 - L2 LINE L2 -2 3270 3119 817 185 0 0 chr2 58301511 58301641 -192386213 + AluJ SINE Alu 1 130 -172 2261 113 0 0 chr2 58301644 58301953 -192385901 + AluSx SINE Alu 1 309 -3 1602 169 51 0 chr2 58301967 58302240 -192385614 + AluJo SINE Alu 1 287 -25 983 199 6 0 chr2 58302269 58302468 -192385386 + AluJ SINE Alu 120 319 0 628 160 19 0 chr2 58302470 58302576 -192385278 + FLAM_C SINE Alu 2 109 -34 207 282 64 13 chr2 58303476 58303554 -192384300 + L2 LINE L2 2581 2662 -652 27 49 0 0 chr2 58304301 58304342 -192383512 + AT_rich Low_complexity Low_complexity 1 41 0 * 412 282 280 25 chr2 58304338 58304772 -192383082 + L2 LINE L2 2771 3312 -1 2324 86 10 10 chr2 58305086 58305387 -192382467 + AluSq SINE Alu 1 301 -12 3288 134 153 23 chr2 58305957 58306612 -192381242 - Tigger3(Golem) DNA MER2_type -1 3028 2289 699 157 0 0 chr2 58306613 58306721 -192381133 - Tigger3(Golem) DNA MER2_type -2921 108 1 22 80 0 0 chr2 58307813 58307863 -192379991 + GC_rich Low_complexity Low_complexity 1 50 0 22 80 0 0 chr2 58308034 58308084 -192379770 + GC_rich Low_complexity Low_complexity 1 50 0 267 114 0 0 chr2 58308204 58308248 -192379606 + (TCC)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr2 58308373 58308394 -192379460 + GC_rich Low_complexity Low_complexity 1 21 0 1065 169 113 40 chr2 58309678 58309979 -192377875 + MER33 DNA MER1_type 1 323 -1 2073 129 20 23 chr2 58310099 58310449 -192377405 + L1MC2 LINE L1 5996 6344 0 22 35 0 0 chr2 58310729 58310758 -192377096 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 58311140 58311162 -192376692 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr2 58311392 58311432 -192376422 + AT_rich Low_complexity Low_complexity 1 40 0 2145 136 3 0 chr2 58311449 58311758 -192376096 + AluSq SINE Alu 4 313 0 2608 51 0 10 chr2 58311972 58312286 -192375568 + AluY SINE Alu 1 311 0 280 170 0 90 chr2 58312408 58312508 -192375346 + L1MC4 LINE L1 6615 6705 -1337 2346 175 7 22 chr2 58312517 58312929 -192374925 + Tigger7 DNA MER2_type 1 406 -2081 274 175 10 5 chr2 58312929 58313131 -192374723 + AluJb SINE Alu 1 294 -8 193 286 48 0 chr2 58313922 58313985 -192373869 + MIR SINE MIR 197 262 0 1668 199 7 0 chr2 58314189 58314485 -192373369 + AluJo SINE Alu 3 300 -12 23 86 0 0 chr2 58314650 58314708 -192373146 + AT_rich Low_complexity Low_complexity 1 58 0 769 133 0 17 chr2 58315373 58315493 -192372361 - FLAM_C SINE Alu -15 118 1 308 258 79 11 chr2 58315527 58315616 -192372238 + MIR SINE MIR 21 115 -93 1299 136 11 0 chr2 58315844 58316035 -192371819 - AluJb SINE Alu -17 295 103 328 167 105 128 chr2 58366203 58366262 -192321592 - L1MA10 LINE L1 -9 6300 6241 2029 138 7 7 chr2 58366262 58366558 -192321296 - AluSq SINE Alu -17 296 1 328 167 105 128 chr2 58366558 58366653 -192321201 - L1MA10 LINE L1 -68 6241 5984 2685 90 36 5 chr2 58366694 58366729 -192321125 - L1PB4 LINE L1 -330 5826 5794 339 25 0 0 chr2 58366729 58366769 -192321085 + (TG)n Simple_repeat Simple_repeat 2 41 0 2685 90 36 5 chr2 58366769 58367120 -192320734 - L1PB4 LINE L1 -362 5794 5428 271 139 0 125 chr2 58367132 58367204 -192320650 - L1PB4 LINE L1 -1565 4581 4519 * 4967 123 30 21 chr2 58367175 58367875 -192319979 - L1MA3 LINE L1 -249 6056 5364 2059 124 14 0 chr2 58367875 58368166 -192319688 - AluSp SINE Alu -18 295 1 4967 123 30 21 chr2 58368166 58368855 -192318999 - L1MA3 LINE L1 -941 5364 4645 3665 36 31 20 chr2 58368958 58369242 -192318612 - LTR2B LTR ERV1 -35 455 163 2350 61 0 17 chr2 58369242 58369579 -192318275 - AluY SINE Alu 0 311 1 3665 36 31 20 chr2 58369579 58369744 -192318110 - LTR2B LTR ERV1 -327 163 1 391 249 63 97 chr2 58369982 58370064 -192317790 - MIR SINE MIR 0 262 179 1736 107 111 15 chr2 58370064 58370335 -192317519 + AluSx SINE Alu 1 297 -15 2222 103 3 0 chr2 58370339 58370640 -192317214 + AluSp SINE Alu 3 304 -9 391 249 63 97 chr2 58370640 58370789 -192317065 - MIR SINE MIR -86 176 34 466 170 14 28 chr2 58371165 58371306 -192316548 + GA-rich Low_complexity Low_complexity 2 140 0 228 77 58 0 chr2 58371767 58371819 -192316035 + (TA)n Simple_repeat Simple_repeat 2 56 0 1576 79 15 5 chr2 58372321 58372563 -192315291 + AluSg/x SINE Alu 79 322 0 20037 128 33 27 chr2 58372563 58375024 -192312830 + L1M1 LINE L1 91 2535 -5030 1908 139 13 13 chr2 58375024 58375325 -192312529 + AluSx SINE Alu 1 301 -11 20037 128 33 27 chr2 58375325 58375733 -192312121 + L1M1 LINE L1 2535 2939 -4626 2136 135 3 3 chr2 58375733 58376044 -192311810 + AluSx SINE Alu 1 311 -1 20037 128 33 27 chr2 58376044 58376410 -192311444 + L1M1 LINE L1 2939 3348 -4217 1845 124 57 11 chr2 58376635 58376917 -192310937 - AluSx SINE Alu -17 295 1 3308 162 65 41 chr2 58377267 58377489 -192310365 + L1MD3 LINE L1 6882 7097 -898 486 0 0 0 chr2 58377489 58377543 -192310311 + (TA)n Simple_repeat Simple_repeat 1 54 0 419 191 0 36 chr2 58377546 58377630 -192310224 + MLT1F1 LTR MaLR 45 125 -442 2032 104 42 3 chr2 58377631 58377920 -192309934 + AluSg SINE Alu 1 300 -10 3308 162 65 41 chr2 58377920 58378504 -192309350 + L1MD3 LINE L1 7097 7989 -6 2202 101 14 0 chr2 58378504 58378801 -192309053 + AluSp SINE Alu 2 302 -11 1678 174 21 3 chr2 58378824 58379106 -192308748 + AluJo SINE Alu 1 287 -25 894 153 0 0 chr2 58379106 58379269 -192308585 + GA-rich Low_complexity Low_complexity 1 163 0 2005 120 0 4 chr2 58379314 58379611 -192308243 + AluSx SINE Alu 11 306 0 1909 149 20 3 chr2 58379697 58379992 -192307862 + AluJb SINE Alu 1 300 -12 189 171 0 0 chr2 58380059 58380094 -192307760 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 245 130 0 0 chr2 58380094 58380140 -192307714 - LTR66 LTR ERVL -171 439 394 206 207 17 0 chr2 58380142 58380200 -192307654 + (TA)n Simple_repeat Simple_repeat 1 59 0 12355 160 27 28 chr2 58380362 58380783 -192307071 + L1M1 LINE L1 3187 3607 -3958 1773 181 7 13 chr2 58380783 58381087 -192306767 + AluJb SINE Alu 1 302 -10 12355 160 27 28 chr2 58381087 58383115 -192304739 + L1M1 LINE L1 3607 5634 -1931 2428 96 0 0 chr2 58383115 58383427 -192304427 + AluSp SINE Alu 1 312 -1 12355 160 27 28 chr2 58383427 58383456 -192304398 + L1M1 LINE L1 5634 5662 -1903 2135 123 3 7 chr2 58383456 58383757 -192304097 + AluSx SINE Alu 1 300 -12 12355 160 27 28 chr2 58383757 58384135 -192303719 + L1M1 LINE L1 5662 6043 -1522 2098 109 0 3 chr2 58384236 58384520 -192303334 - AluSx SINE Alu -29 283 1 24 32 0 0 chr2 58384669 58384700 -192303154 + AT_rich Low_complexity Low_complexity 1 31 0 733 238 159 26 chr2 58384740 58385152 -192302702 - L1ME2 LINE L1 0 6233 5661 2222 126 0 0 chr2 58385152 58385453 -192302401 - AluSx SINE Alu -11 301 1 733 238 159 26 chr2 58385453 58385571 -192302283 - L1ME2 LINE L1 -572 5661 5560 2253 222 117 21 chr2 58385575 58386677 -192301177 - L1ME2 LINE L1 -1486 4729 2168 832 157 0 27 chr2 58386678 58386825 -192301029 - FLAM_C SINE Alu 0 143 1 657 191 62 11 chr2 58386825 58387003 -192300851 - L1ME2 LINE L1 -4243 2153 1967 1982 119 7 27 chr2 58387081 58387376 -192300478 - AluSx SINE Alu -23 289 1 212 0 36 0 chr2 58387535 58387563 -192300291 + (TTTTG)n Simple_repeat Simple_repeat 4 32 0 2315 71 4 0 chr2 58389250 58389574 -192298280 - AluSp SINE Alu 0 326 2 2181 115 0 3 chr2 58390271 58390566 -192297288 - AluSx SINE Alu -18 294 1 457 273 6 29 chr2 58390843 58391015 -192296839 + C-rich Low_complexity Low_complexity 5 172 0 408 239 0 0 chr2 58391298 58391489 -192296365 + C-rich Low_complexity Low_complexity 1 191 0 537 121 0 0 chr2 58391580 58391663 -192296191 + (TA)n Simple_repeat Simple_repeat 2 84 0 318 256 128 44 chr2 58391693 58391873 -192295981 + L1ME4a LINE L1 5710 5904 -217 1224 159 0 44 chr2 58391912 58392139 -192295715 + AluJo SINE Alu 84 300 -12 2226 108 3 0 chr2 58392330 58392627 -192295227 + AluY SINE Alu 1 298 -13 23 0 0 0 chr2 58392836 58392859 -192294995 + AT_rich Low_complexity Low_complexity 1 23 0 2336 92 26 0 chr2 58393126 58393431 -192294423 + AluSq SINE Alu 1 313 0 278 213 0 13 chr2 58393916 58393991 -192293863 + CT-rich Low_complexity Low_complexity 3 76 0 1308 107 0 0 chr2 58394003 58394172 -192293682 - AluSx SINE Alu -143 169 1 225 210 153 111 chr2 58394466 58394728 -192293126 + L1ME4a LINE L1 5267 5539 -2269 398 77 0 0 chr2 58394822 58394874 -192292980 - MADE1 DNA Mariner 0 80 29 1713 121 110 0 chr2 58394878 58395151 -192292703 + AluSx SINE Alu 1 303 -9 286 257 77 68 chr2 58395212 58395367 -192292487 + L1ME4a LINE L1 5845 6004 -117 7642 72 14 8 chr2 58395367 58396331 -192291523 + LTR5 LTR ERVK 1 969 0 286 257 77 68 chr2 58396331 58396397 -192291457 + L1ME4a LINE L1 6004 6068 -53 4684 63 28 0 chr2 58396854 58397429 -192290425 - LTR10C LTR ERV1 0 591 1 844 138 8 8 chr2 58397673 58397803 -192290051 - FLAM_C SINE Alu -3 130 1 1687 163 21 0 chr2 58397832 58398121 -192289733 + AluJb SINE Alu 1 295 -17 2044 101 13 50 chr2 58399096 58399414 -192288440 - AluSx SINE Alu -6 306 1 2100 114 7 0 chr2 58400637 58400927 -192286927 - AluSq SINE Alu -21 292 1 1430 189 42 14 chr2 58401186 58401472 -192286382 + AluJo SINE Alu 1 294 -18 2180 110 0 38 chr2 58401730 58402048 -192285806 + AluSx SINE Alu 1 306 -6 809 101 18 0 chr2 58402060 58402169 -192285685 + HY1 scRNA scRNA 1 111 -1 1354 188 64 11 chr2 58402233 58402499 -192285355 + AluJb SINE Alu 1 280 -32 491 127 42 0 chr2 58402553 58402624 -192285230 + AluSg/x SINE Alu 120 193 -117 2409 81 0 0 chr2 58402730 58403026 -192284828 - AluSc SINE Alu -13 296 1 208 190 152 51 chr2 58403533 58403612 -192284242 - MIR3 SINE MIR -32 176 90 438 69 0 0 chr2 58405790 58405848 -192282006 + (GA)n Simple_repeat Simple_repeat 1 58 0 1868 128 64 0 chr2 58408642 58408924 -192278930 + AluSg SINE Alu 1 300 -10 22 0 0 0 chr2 58410986 58411008 -192276846 + AT_rich Low_complexity Low_complexity 1 22 0 365 220 170 0 chr2 58412817 58412917 -192274937 + L2 LINE L2 3197 3313 0 21 0 0 0 chr2 58412930 58412951 -192274903 + AT_rich Low_complexity Low_complexity 1 21 0 1965 105 41 7 chr2 58412981 58413276 -192274578 + AluSg SINE Alu 1 305 -5 300 67 50 0 chr2 58413476 58413536 -192274318 + (TA)n Simple_repeat Simple_repeat 2 64 0 2205 105 0 0 chr2 58413543 58413837 -192274017 - AluSx SINE Alu -18 294 1 23 0 0 0 chr2 58414466 58414489 -192273365 + AT_rich Low_complexity Low_complexity 1 23 0 346 80 0 0 chr2 58414494 58414544 -192273310 - HY3 scRNA scRNA -1 100 51 1362 150 7 40 chr2 58414756 58415029 -192272825 + AluJb SINE Alu 49 312 0 2111 109 0 13 chr2 58415043 58415345 -192272509 + AluSx SINE Alu 1 298 -14 2232 96 0 0 chr2 58416645 58416936 -192270918 - AluSx SINE Alu -21 291 1 24 53 0 0 chr2 58416973 58417011 -192270843 + AT_rich Low_complexity Low_complexity 1 38 0 2310 59 42 0 chr2 58419517 58419806 -192268048 - AluSp SINE Alu -12 301 1 1856 122 37 10 chr2 58420162 58420456 -192267398 + AluJo SINE Alu 11 312 0 1446 157 15 83 chr2 58421692 58422016 -192265838 + AluJo SINE Alu 1 302 -10 2294 102 0 3 chr2 58422035 58422340 -192265514 - AluY SINE Alu -7 304 1 219 232 0 0 chr2 58422573 58422629 -192265225 + (TA)n Simple_repeat Simple_repeat 1 56 0 1921 129 36 0 chr2 58422722 58423001 -192264853 - AluSx SINE Alu -23 289 1 2226 78 20 0 chr2 58423485 58423779 -192264075 - AluSp SINE Alu -13 300 1 706 139 23 47 chr2 58423782 58423911 -192263943 - AluJo/FLAM SINE Alu -176 126 1 726 239 7 7 chr2 58423923 58424078 -192263776 - FRAM SINE Alu -11 155 1 1564 98 169 4 chr2 58424102 58424357 -192263497 - AluSx SINE Alu -2 300 4 21 36 0 0 chr2 58426125 58426153 -192261701 + AT_rich Low_complexity Low_complexity 1 28 0 1668 181 27 0 chr2 58426551 58426843 -192261011 + AluSx SINE Alu 1 300 -12 291 344 125 6 chr2 58427737 58427897 -192259957 - MIR SINE MIR -64 198 20 361 353 72 65 chr2 58428153 58428586 -192259268 + L2 LINE L2 2828 3263 -9 347 293 95 17 chr2 58429187 58429303 -192258551 + MIR SINE MIR 122 246 -16 2054 104 24 0 chr2 58429328 58429615 -192258239 - AluSp SINE Alu -18 295 2 190 254 169 0 chr2 58429871 58429930 -192257924 - MER5A DNA MER1_type -57 132 64 868 220 172 94 chr2 58430145 58430521 -192257333 + MLT1H LTR MaLR 1 403 -192 2227 104 0 0 chr2 58430653 58430951 -192256903 - AluSx SINE Alu -12 300 3 768 226 21 38 chr2 58430958 58431144 -192256710 - L1ME3A LINE L1 -44 6126 5944 465 325 48 26 chr2 58431546 58431777 -192256077 - L1M4b LINE L1 -6613 246 11 1272 210 3 69 chr2 58432692 58432983 -192254871 + AluJo SINE Alu 11 282 -30 2192 113 3 0 chr2 58432991 58433283 -192254571 - AluSx SINE Alu -19 293 1 180 111 0 0 chr2 58433383 58433410 -192254444 + (TA)n Simple_repeat Simple_repeat 2 28 0 24 53 0 0 chr2 58433415 58433453 -192254401 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 58433734 58433757 -192254097 + AT_rich Low_complexity Low_complexity 1 23 0 225 178 0 0 chr2 58434281 58434326 -192253528 + (TA)n Simple_repeat Simple_repeat 2 46 0 26 0 0 0 chr2 58434908 58434934 -192252920 + AT_rich Low_complexity Low_complexity 1 26 0 235 292 106 99 chr2 58436896 58437076 -192250778 + L1MC4a LINE L1 5360 5544 -2264 1964 154 3 0 chr2 58437076 58437381 -192250473 + AluJb SINE Alu 1 306 -6 235 292 106 99 chr2 58437381 58437484 -192250370 + L1MC4a LINE L1 5544 5645 -2163 2192 88 3 3 chr2 58437523 58437818 -192250036 + AluY SINE Alu 5 299 -12 339 226 18 20 chr2 58437818 58437957 -192249897 + L1MC4a LINE L1 5738 5818 -303 436 308 227 22 chr2 58438309 58438630 -192249224 - L2 LINE L2 -8 3305 2919 26 0 0 0 chr2 58438942 58438968 -192248886 + AT_rich Low_complexity Low_complexity 1 26 0 186 365 0 24 chr2 58440152 58440237 -192247617 + L2 LINE L2 2594 2676 -638 266 346 29 19 chr2 58440262 58440366 -192247488 + L2 LINE L2 2925 3029 -243 190 259 93 0 chr2 58440549 58440603 -192247251 + L2 LINE L2 3250 3308 -5 23 0 0 0 chr2 58440925 58440948 -192246906 + AT_rich Low_complexity Low_complexity 1 23 0 2364 88 0 10 chr2 58441514 58441819 -192246035 - AluSp SINE Alu -11 302 1 539 244 76 52 chr2 58442891 58443063 -192244791 + MIR SINE MIR 28 203 -59 229 276 69 0 chr2 58443115 58443173 -192244681 + MIR SINE MIR 200 261 -1 22 0 0 0 chr2 58443443 58443465 -192244389 + AT_rich Low_complexity Low_complexity 1 22 0 185 337 82 10 chr2 58445131 58445229 -192242625 - MER5A DNA MER1_type 0 189 85 1495 170 42 45 chr2 58445314 58445602 -192242252 + AluJo SINE Alu 7 293 -19 194 271 0 0 chr2 58445614 58445662 -192242192 + MIR SINE MIR 98 145 -63 29 47 0 0 chr2 58445934 58445977 -192241877 + AT_rich Low_complexity Low_complexity 1 43 0 1106 167 0 60 chr2 58447026 58447241 -192240613 + AluJb SINE Alu 85 286 -26 237 65 0 0 chr2 58447251 58447282 -192240572 + (TAA)n Simple_repeat Simple_repeat 2 32 0 384 141 56 0 chr2 58447752 58447823 -192240031 + MER5A DNA MER1_type 1 75 -114 1200 189 22 99 chr2 58447965 58448330 -192239524 + L1MC5 LINE L1 6693 7029 -932 2044 115 0 13 chr2 58448352 58448656 -192239198 - AluSx SINE Alu -12 300 1 259 214 112 22 chr2 58448656 58448745 -192239109 + L1MC5 LINE L1 7817 7913 -48 1731 146 46 13 chr2 58449214 58449516 -192238338 - AluJo SINE Alu 0 312 1 25 31 0 0 chr2 58449960 58449992 -192237862 + AT_rich Low_complexity Low_complexity 1 32 0 2100 89 3 36 chr2 58450880 58451182 -192236672 + AluSc SINE Alu 1 292 -17 1887 131 77 3 chr2 58452207 58452543 -192235311 - MER46B DNA MER2_type 0 236 1 2456 67 0 10 chr2 58452913 58453227 -192234627 - AluY SINE Alu 0 311 1 258 32 0 0 chr2 58454063 58454094 -192233760 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 802 129 0 9 chr2 58454098 58454214 -192233640 - FLAM_C SINE Alu -28 115 1 2187 96 4 0 chr2 58454224 58454550 -192233304 - AluSx SINE Alu 0 327 1 718 186 0 8 chr2 58454930 58455048 -192232806 - FLAM_C SINE Alu -16 117 1 2435 78 0 3 chr2 58455274 58455581 -192232273 + AluY SINE Alu 1 306 -5 272 277 323 17 chr2 58455609 58455844 -192232010 - L3 LINE CR1 -95 1482 1176 772 207 30 76 chr2 58456006 58456049 -192231805 - MER5A DNA MER1_type 0 189 146 1932 154 0 3 chr2 58456049 58456354 -192231500 + AluSx SINE Alu 1 304 -8 772 207 30 76 chr2 58456354 58456508 -192231346 - MER5A DNA MER1_type -43 146 1 998 196 140 94 chr2 58457168 58457609 -192230245 - MLT1C LTR MaLR 0 467 1 1869 167 109 49 chr2 58457788 58458237 -192229617 - MER31A LTR ERV1 -9 476 1 2242 116 0 0 chr2 58458282 58458585 -192229269 + AluSg SINE Alu 1 303 -7 1036 138 24 21 chr2 58458751 58458965 -192228889 + L1MB4 LINE L1 5644 5853 -327 284 282 18 0 chr2 58459013 58459123 -192228731 - L1MEc LINE L1 -4964 1346 1235 342 254 35 44 chr2 58459343 58459457 -192228397 - L1MEc LINE L1 -4923 1196 1084 * 577 209 105 7 chr2 58459452 58459605 -192228249 - L1MB7 LINE L1 0 6184 6017 2087 88 9 60 chr2 58460048 58460365 -192227489 + AluSq SINE Alu 1 301 -12 1488 164 66 24 chr2 58460582 58460869 -192226985 - AluJo SINE Alu -3 309 11 956 144 0 7 chr2 58460923 58461062 -192226792 + AluJo SINE Alu 2 139 -173 1159 176 5 5 chr2 58461064 58461263 -192226591 + AluJb SINE Alu 97 295 -17 1959 135 13 35 chr2 58461291 58461609 -192226245 + AluJo SINE Alu 1 311 -1 297 0 0 0 chr2 58461609 58461642 -192226212 + (TA)n Simple_repeat Simple_repeat 1 33 0 21 89 0 0 chr2 58462783 58462839 -192225015 + AT_rich Low_complexity Low_complexity 1 56 0 555 231 44 100 chr2 58463474 58463611 -192224243 + MER102b DNA MER1_type 103 221 -1207 222 105 0 0 chr2 58463611 58463649 -192224205 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 555 231 44 100 chr2 58463649 58463762 -192224092 + MER102b DNA MER1_type 221 339 -2 774 200 8 0 chr2 58463961 58464091 -192223763 - FLAM_C SINE Alu -2 131 1 1777 166 7 7 chr2 58465751 58466040 -192221814 + AluJo SINE Alu 1 289 -23 22 0 0 0 chr2 58466572 58466594 -192221260 + AT_rich Low_complexity Low_complexity 1 22 0 2459 46 13 7 chr2 58466696 58467000 -192220854 + AluSp SINE Alu 2 307 -6 29 47 0 0 chr2 58467285 58467328 -192220526 + AT_rich Low_complexity Low_complexity 1 43 0 22 80 0 0 chr2 58467471 58467521 -192220333 + GC_rich Low_complexity Low_complexity 1 50 0 2399 64 0 3 chr2 58467858 58468153 -192219701 - AluSg SINE Alu -16 294 1 2392 67 3 3 chr2 58469968 58470268 -192217586 + AluY SINE Alu 1 300 -11 241 323 25 25 chr2 58470506 58470632 -192217222 - L1MB7 LINE L1 -262 5859 5731 1822 147 7 7 chr2 58470632 58470918 -192216936 - AluSx SINE Alu -26 286 1 241 323 25 25 chr2 58470918 58470952 -192216902 - L1MB7 LINE L1 -389 5732 5699 530 266 32 39 chr2 58471220 58471374 -192216480 - L2 LINE L2 0 3313 3161 2406 95 0 0 chr2 58471385 58471691 -192216163 + AluSg SINE Alu 3 308 -2 200 281 52 59 chr2 58471748 58471883 -192215971 + L2 LINE L2 2744 2877 -437 192 304 47 108 chr2 58472108 58472322 -192215532 + L2 LINE L2 3072 3272 0 207 0 0 0 chr2 58472455 58472478 -192215376 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 1327 259 80 54 chr2 58472707 58472855 -192214999 - L2 LINE L2 0 3313 3170 2036 161 0 3 chr2 58472855 58473166 -192214688 + AluSx SINE Alu 3 312 0 1327 259 80 54 chr2 58473166 58473540 -192214314 - L2 LINE L2 -143 3170 2794 350 286 0 0 chr2 58473540 58473610 -192214244 - MER91A DNA MER1_type 0 196 127 2980 228 121 30 chr2 58473672 58473777 -192214077 - L2 LINE L2 -522 2792 2698 2286 96 7 0 chr2 58473777 58474078 -192213776 + AluSp SINE Alu 1 303 -10 2980 228 121 30 chr2 58474078 58474916 -192212938 - L2 LINE L2 -616 2698 1763 2381 83 3 0 chr2 58474954 58475255 -192212599 + AluSq SINE Alu 1 302 -11 1753 152 7 3 chr2 58477617 58477906 -192209948 - AluSx SINE Alu -14 298 9 209 200 15 77 chr2 58477930 58477995 -192209859 + MIR SINE MIR 183 243 -19 850 177 63 6 chr2 58478242 58478400 -192209454 - AluJb SINE Alu -10 302 136 466 177 25 0 chr2 58478394 58478473 -192209381 - AluS SINE Alu -221 92 12 * 329 182 0 0 chr2 58479859 58479914 -192207940 - MER20 DNA MER1_type -5 214 160 884 222 152 16 chr2 58479915 58480158 -192207696 + AluJo SINE Alu 21 296 -16 2413 109 0 0 chr2 58481623 58481935 -192205919 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 58482034 58482059 -192205795 + AT_rich Low_complexity Low_complexity 1 25 0 1191 177 114 0 chr2 58482064 58482301 -192205553 - AluJo SINE Alu -48 264 1 2489 63 3 3 chr2 58482374 58482675 -192205179 - AluSp SINE Alu -12 301 1 1888 219 75 31 chr2 58482929 58483492 -192204362 + L1MC4 LINE L1 7468 7995 0 30 27 0 0 chr2 58483590 58483627 -192204227 + AT_rich Low_complexity Low_complexity 1 37 0 2345 76 7 0 chr2 58484283 58484573 -192203281 + AluSq SINE Alu 1 292 -21 189 302 75 0 chr2 58484708 58484761 -192203093 - L2 LINE L2 -3 3269 3213 2236 114 0 16 chr2 58485120 58485436 -192202418 + AluSx SINE Alu 1 311 -1 2072 139 0 0 chr2 58485545 58485839 -192202015 + AluSq SINE Alu 1 294 -19 2063 119 26 7 chr2 58485850 58486152 -192201702 + AluSx SINE Alu 1 308 -4 508 227 23 0 chr2 58488378 58488466 -192199388 + FLAM_A SINE Alu 1 90 -52 559 164 0 70 chr2 58488488 58488616 -192199238 + L1MB2 LINE L1 5710 5828 -340 867 146 0 23 chr2 58488617 58488747 -192199107 + AluJo/FLAM SINE Alu 1 127 -175 2311 109 0 6 chr2 58488749 58489060 -192198794 + AluSx SINE Alu 1 309 -3 1661 180 30 33 chr2 58489071 58489225 -192198629 + L1MB2 LINE L1 5812 5965 -206 2132 122 3 10 chr2 58489225 58489536 -192198318 + AluSq SINE Alu 2 310 -3 1661 180 30 33 chr2 58489536 58489742 -192198112 + L1MB2 LINE L1 5965 6171 0 424 314 82 31 chr2 58491028 58491187 -192196667 + MIR3 SINE MIR 14 180 -28 2117 115 20 3 chr2 58491340 58491635 -192196219 + AluSx SINE Alu 1 300 -12 216 0 0 0 chr2 58491649 58491673 -192196181 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1700 183 7 0 chr2 58491964 58492254 -192195600 - AluSx SINE Alu -20 292 1 1302 206 0 12 chr2 58493003 58493250 -192194604 + AluJo SINE Alu 1 244 -68 2252 100 0 3 chr2 58493959 58494250 -192193604 + AluSx SINE Alu 1 290 -22 1217 177 60 30 chr2 58494264 58494496 -192193358 + MER8 DNA MER2_type 1 239 0 219 219 125 0 chr2 58494722 58494786 -192193068 + L2 LINE L2 3237 3308 -5 2411 86 20 0 chr2 58494983 58495287 -192192567 + AluSq SINE Alu 1 310 -3 241 182 195 26 chr2 58495663 58495740 -192192114 + MIR SINE MIR 128 217 -45 656 302 35 9 chr2 58496321 58496577 -192191277 + MIR SINE MIR 5 262 0 21 36 0 0 chr2 58496618 58496646 -192191208 + AT_rich Low_complexity Low_complexity 1 28 0 1010 113 0 0 chr2 58496703 58496836 -192191018 + AluSq/x SINE Alu 1 133 -179 2292 112 0 0 chr2 58496841 58497145 -192190709 + AluSg SINE Alu 1 304 -6 23 33 0 0 chr2 58498281 58498311 -192189543 + AT_rich Low_complexity Low_complexity 1 30 0 1006 197 57 0 chr2 58498499 58498692 -192189162 + MER82 DNA MER2_type 1 204 -449 237 69 56 28 chr2 58498692 58498764 -192189090 + (TA)n Simple_repeat Simple_repeat 1 74 0 2105 206 28 32 chr2 58498780 58499181 -192188673 + MER82 DNA MER2_type 169 569 -84 2082 134 7 0 chr2 58499181 58499480 -192188374 - AluSq SINE Alu -11 302 2 2105 206 28 32 chr2 58499480 58499544 -192188310 + MER82 DNA MER2_type 569 632 -21 309 89 0 0 chr2 58499590 58499635 -192188219 + (CA)n Simple_repeat Simple_repeat 2 46 0 27 0 0 0 chr2 58499705 58499732 -192188122 + AT_rich Low_complexity Low_complexity 1 27 0 2350 73 17 0 chr2 58499732 58500021 -192187833 + AluSg SINE Alu 1 294 -16 1571 173 40 11 chr2 58500021 58500299 -192187555 - AluJo SINE Alu -22 290 5 2164 118 7 3 chr2 58500504 58500808 -192187046 + AluSx SINE Alu 1 305 -7 1443 194 191 35 chr2 58500854 58501094 -192186760 + MER63B DNA MER1_type 1 202 -860 1673 174 20 20 chr2 58501094 58501398 -192186456 - AluJb SINE Alu -8 304 1 1443 194 191 35 chr2 58501398 58501534 -192186320 + MER63B DNA MER1_type 202 436 0 2047 117 13 37 chr2 58501693 58501836 -192186018 + AluSq SINE Alu 1 146 -167 2303 115 0 0 chr2 58501836 58502140 -192185714 + AluSx SINE Alu 1 304 -8 2047 117 13 37 chr2 58502140 58502296 -192185558 + AluSq SINE Alu 146 293 -20 368 129 48 0 chr2 58502821 58502883 -192184971 + L1MC5 LINE L1 7696 7760 -201 1969 159 3 0 chr2 58502970 58503259 -192184595 + AluSx SINE Alu 2 291 -21 2406 83 3 3 chr2 58503424 58503726 -192184128 + AluSp SINE Alu 1 302 -11 414 249 82 0 chr2 58503867 58504045 -192183809 + MIR SINE MIR 15 180 -82 24 0 0 0 chr2 58504244 58504268 -192183586 + AT_rich Low_complexity Low_complexity 1 24 0 1859 57 0 9 chr2 58504295 58504522 -192183332 - AluY SINE Alu -14 297 73 1340 114 0 0 chr2 58504850 58505043 -192182811 + AluSq SINE Alu 121 313 0 1963 148 36 10 chr2 58505062 58505366 -192182488 + AluJb SINE Alu 1 312 0 2274 100 0 37 chr2 58505937 58506123 -192181731 - AluSg SINE Alu -1 309 138 2282 123 0 0 chr2 58506123 58506432 -192181422 - AluSg SINE Alu -1 309 1 2274 100 0 37 chr2 58506432 58506566 -192181288 - AluSg SINE Alu -172 138 1 1119 135 0 0 chr2 58506871 58507034 -192180820 + AluSg/x SINE Alu 137 299 -11 257 289 41 72 chr2 58507313 58507410 -192180444 - L2 LINE L2 -10 3303 3210 1613 181 13 40 chr2 58507639 58507938 -192179916 - AluJb SINE Alu -21 291 1 2340 113 0 0 chr2 58508366 58508676 -192179178 + AluSq SINE Alu 1 310 -3 213 361 131 0 chr2 58508693 58508823 -192179031 - L2 LINE L2 -15 3257 3111 1505 170 55 27 chr2 58509191 58509521 -192178333 - MER2 DNA MER2_type -1 344 6 2200 104 3 7 chr2 58509647 58509944 -192177910 + AluSx SINE Alu 1 296 -16 219 158 53 0 chr2 58510080 58510137 -192177717 + (TA)n Simple_repeat Simple_repeat 2 61 0 2217 123 0 7 chr2 58510260 58510569 -192177285 - AluSx SINE Alu -5 307 1 2230 92 7 7 chr2 58510664 58510958 -192176896 - AluSq SINE Alu -19 294 1 217 345 25 17 chr2 58511016 58511135 -192176719 + MIR SINE MIR 16 135 -73 22 0 0 0 chr2 58511138 58511160 -192176694 + AT_rich Low_complexity Low_complexity 1 22 0 2303 84 7 0 chr2 58511470 58511766 -192176088 + AluSx SINE Alu 1 298 -14 730 246 34 13 chr2 58512044 58512228 -192175626 - MIR3 SINE MIR -17 191 3 2637 167 12 39 chr2 58512871 58513131 -192174723 - L1MA8 LINE L1 -203 6088 5823 2211 86 30 13 chr2 58513131 58513434 -192174420 - AluSc SINE Alu 0 309 2 2637 167 12 39 chr2 58513434 58513447 -192174407 - L1MA8 LINE L1 -468 5823 5811 2215 119 0 0 chr2 58513447 58513740 -192174114 - AluSg SINE Alu -17 293 1 2637 167 12 39 chr2 58513740 58514029 -192173825 - L1MA8 LINE L1 -480 5811 5540 452 225 51 29 chr2 58514367 58514505 -192173349 - MIR SINE MIR 0 262 122 324 345 109 0 chr2 58514774 58514884 -192172970 + L2 LINE L2 3148 3269 -3 25 0 0 0 chr2 58516979 58517004 -192170850 + AT_rich Low_complexity Low_complexity 1 25 0 2214 111 17 0 chr2 58517396 58517694 -192170160 - AluSx SINE Alu -9 303 1 30 0 0 0 chr2 58518337 58518367 -192169487 + AT_rich Low_complexity Low_complexity 1 30 0 2225 102 0 0 chr2 58518407 58518717 -192169137 - AluSq SINE Alu 0 310 1 263 161 58 23 chr2 58518719 58518806 -192169048 + L1MB7 LINE L1 6093 6182 -2 1558 159 45 107 chr2 58519260 58519604 -192168250 + Charlie1b DNA MER1_type 2 366 -2395 2094 148 0 10 chr2 58519604 58519909 -192167945 - AluSx SINE Alu -10 302 1 1558 159 45 107 chr2 58519909 58519965 -192167889 + Charlie1b DNA MER1_type 366 424 -2337 1791 165 10 10 chr2 58519965 58520262 -192167592 - AluJb SINE Alu -15 297 1 1558 159 45 107 chr2 58520262 58520274 -192167580 + Charlie1b DNA MER1_type 424 435 -2326 2278 95 0 3 chr2 58520274 58520570 -192167284 - AluSg SINE Alu -15 295 1 1558 159 45 107 chr2 58520570 58520694 -192167160 + Charlie1b DNA MER1_type 435 509 -14 224 319 14 0 chr2 58521838 58521910 -192165944 + CT-rich Low_complexity Low_complexity 2 74 0 2052 93 43 0 chr2 58521936 58522214 -192165640 - AluSx SINE Alu -22 290 1 203 359 105 0 chr2 58522340 58522521 -192165333 + L2 LINE L2 1632 1831 -1483 219 156 78 0 chr2 58522593 58522670 -192165184 + (TA)n Simple_repeat Simple_repeat 1 83 0 1776 153 29 0 chr2 58522675 58522949 -192164905 - AluJo SINE Alu -30 282 1 605 256 31 0 chr2 58523103 58523232 -192164622 - FLAM_A SINE Alu 0 133 1 247 116 0 23 chr2 58523286 58523329 -192164525 - Tigger4(Zombi) DNA MER2_type -4 2727 2686 1812 155 13 19 chr2 58523333 58523643 -192164211 - AluJo SINE Alu -4 308 1 304 175 0 0 chr2 58523644 58523701 -192164153 - L1MB4 LINE L1 -39 6141 6085 2753 151 4 49 chr2 58523729 58524148 -192163706 + L1MB7 LINE L1 5655 6045 -139 2167 121 13 0 chr2 58524148 58524454 -192163400 + AluSg SINE Alu 1 310 0 2753 151 4 49 chr2 58524454 58524584 -192163270 + L1MB7 LINE L1 6045 6179 -5 25 0 0 0 chr2 58525193 58525218 -192162636 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr2 58525647 58525667 -192162187 + (A)n Simple_repeat Simple_repeat 1 20 0 1731 171 56 121 chr2 58525853 58526141 -192161713 - MER7C DNA MER2_type -2426 602 297 2216 92 35 0 chr2 58526141 58526423 -192161431 - AluSx SINE Alu -15 297 6 1731 171 56 121 chr2 58526423 58526560 -192161294 - MER7C DNA MER2_type -2731 297 153 2233 95 0 10 chr2 58526560 58526864 -192160990 - AluSx SINE Alu -11 301 1 1731 171 56 121 chr2 58526864 58527081 -192160773 - MER7C DNA MER2_type -2875 153 1 21 0 0 0 chr2 58527334 58527355 -192160499 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr2 58527982 58528005 -192159849 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2877 94 14 0 chr2 58528008 58528433 -192159421 - L1PA10 LINE L1 -20 6148 5718 482 182 93 117 chr2 58528567 58528645 -192159209 - MER3 DNA MER1_type 0 209 131 1747 122 95 8 chr2 58528645 58528927 -192158927 + AluSx SINE Alu 1 305 0 482 182 93 117 chr2 58528927 58529061 -192158793 - MER3 DNA MER1_type -78 131 1 243 303 152 15 chr2 58529103 58529235 -192158619 - MIR3 SINE MIR -36 172 23 363 189 0 38 chr2 58529308 58529414 -192158440 + CT-rich Low_complexity Low_complexity 1 102 0 737 261 45 0 chr2 58580365 58580564 -192107290 - MER58A DNA MER1_type -16 208 1 1922 70 26 4 chr2 58582468 58582553 -192105301 - L1MA2 LINE L1 -255 6049 5965 604 259 18 40 chr2 58582553 58582777 -192105077 - L1PA6 LINE L1 -195 5959 5741 23 0 0 0 chr2 58582797 58582820 -192105034 + AT_rich Low_complexity Low_complexity 1 23 0 243 103 0 0 chr2 58583391 58583430 -192104424 + (TG)n Simple_repeat Simple_repeat 2 40 0 929 191 0 34 chr2 58583866 58584044 -192103810 - AluJb SINE Alu -12 300 129 1790 118 69 28 chr2 58584053 58584342 -192103512 - AluSx SINE Alu -11 301 1 1553 117 4 8 chr2 58584417 58584657 -192103197 - L1PB1 LINE L1 -2 6149 5911 293 191 95 12 chr2 58585148 58585232 -192102622 + L1MC4 LINE L1 7952 8042 0 1931 121 21 3 chr2 58585293 58585583 -192102271 - AluSq SINE Alu -18 295 1 1851 148 7 23 chr2 58585624 58585928 -192101926 - AluSx SINE Alu -9 303 5 241 174 87 0 chr2 58586416 58586462 -192101392 + Tigger5 DNA MER2_type 2274 2323 0 645 218 37 4 chr2 58586474 58586744 -192101110 - L1M4 LINE L1 -2408 3738 3370 2288 131 0 3 chr2 58586773 58587086 -192100768 - AluSq SINE Alu -1 312 1 5865 50 0 7 chr2 58587122 58587843 -192100011 - L1PA6 LINE L1 -1 6153 5438 315 146 0 0 chr2 58588002 58588057 -192099797 + (TA)n Simple_repeat Simple_repeat 1 55 0 1921 146 7 3 chr2 58588057 58588345 -192099509 - AluSx SINE Alu -23 289 1 232 292 131 60 chr2 58588388 58588892 -192098962 + L1MEd LINE L1 604 1143 -4976 2311 116 0 0 chr2 58588959 58589270 -192098584 + AluSx SINE Alu 1 311 -1 2271 102 7 0 chr2 58589330 58589624 -192098230 + AluSq SINE Alu 1 296 -17 683 179 0 0 chr2 58589712 58589818 -192098036 + FLAM_C SINE Alu 7 112 -31 2093 120 10 3 chr2 58589957 58590257 -192097597 - AluSx SINE Alu -10 302 1 952 159 7 0 chr2 58590537 58590688 -192097166 - MER58B DNA MER1_type 0 341 190 999 289 67 17 chr2 58591042 58591444 -192096410 - LTR33 LTR ERVL -49 472 51 1764 162 14 24 chr2 58591691 58591988 -192095866 - AluJb SINE Alu -18 294 1 1863 163 0 0 chr2 58592125 58592414 -192095440 + AluJb SINE Alu 1 289 -23 591 221 20 0 chr2 58592558 58592707 -192095147 - L1MD3 LINE L1 -8 7987 7836 42144 42 2 0 chr2 58592707 58597730 -192090124 + L1P LINE L1 3 5035 -1111 250 270 34 34 chr2 58597888 58597977 -192089877 + L1ME LINE L1 5619 5707 -414 1274 161 0 10 chr2 58597978 58598207 -192089647 - AluJo SINE Alu 0 314 88 257 282 81 20 chr2 58598217 58598366 -192089488 + L1ME LINE L1 5725 5882 -239 203 228 29 140 chr2 58598412 58598470 -192089384 + MIR SINE MIR 77 113 -149 2176 161 21 5 chr2 58598470 58598854 -192089000 + MLT1B LTR MaLR 1 390 0 203 228 29 140 chr2 58598854 58598931 -192088923 + MIR SINE MIR 113 197 -65 280 53 26 0 chr2 58599284 58599322 -192088532 + AluY SINE Alu 2 40 -261 211 163 0 41 chr2 58599348 58599397 -192088457 + (TATG)n Simple_repeat Simple_repeat 4 50 0 1993 128 38 0 chr2 58599426 58599714 -192088140 - AluSx SINE Alu -13 299 1 2186 104 0 17 chr2 58600283 58600582 -192087272 + AluSx SINE Alu 1 294 -18 38 0 0 20 chr2 58600629 58600653 -192087201 + AT_rich Low_complexity Low_complexity 1 24 -24 1981 59 0 16 chr2 58600653 58600909 -192086945 + AluY SINE Alu 41 292 -19 38 0 0 20 chr2 58600909 58600933 -192086921 + AT_rich Low_complexity Low_complexity 24 48 0 2315 96 0 7 chr2 58601247 58601550 -192086304 + AluSx SINE Alu 1 301 -11 23 33 0 0 chr2 58601724 58601754 -192086100 + AT_rich Low_complexity Low_complexity 1 30 0 2113 70 77 0 chr2 58602184 58602471 -192085383 - AluSx SINE Alu 0 312 4 448 315 75 39 chr2 58603999 58604253 -192083601 + L3 LINE CR1 1312 1574 -3 583 85 0 0 chr2 58604402 58604484 -192083370 - Alu SINE Alu -10 301 220 243 0 0 0 chr2 58604795 58604822 -192083032 + (TG)n Simple_repeat Simple_repeat 2 28 0 2347 109 0 0 chr2 58604825 58605129 -192082725 - AluSx SINE Alu -8 304 1 25 51 0 0 chr2 58605134 58605173 -192082681 + AT_rich Low_complexity Low_complexity 1 39 0 1944 143 7 3 chr2 58605682 58605983 -192081871 - AluJb SINE Alu -10 302 1 1993 164 3 10 chr2 58606017 58606327 -192081527 + AluJb SINE Alu 5 312 0 2209 120 0 13 chr2 58606328 58606644 -192081210 + AluSx SINE Alu 1 312 0 1510 190 13 42 chr2 58607454 58607765 -192080089 - AluJo SINE Alu -10 302 1 678 253 37 62 chr2 58607769 58607899 -192079955 - MIR SINE MIR -6 256 133 2414 70 10 0 chr2 58607899 58608201 -192079653 + AluSp SINE Alu 1 305 -8 678 253 37 62 chr2 58608201 58608311 -192079543 - MIR SINE MIR -129 133 22 1494 194 10 31 chr2 58608380 58608669 -192079185 + AluJo SINE Alu 12 294 -18 2310 82 17 3 chr2 58608834 58609128 -192078726 - AluSq SINE Alu -15 298 1 229 311 65 133 chr2 58609160 58609514 -192078340 + L2 LINE L2 2933 3262 -10 630 190 0 7 chr2 58609635 58609772 -192078082 - FRAM SINE Alu -4 172 37 984 198 11 0 chr2 58609874 58610056 -192077798 + AluJo SINE Alu 121 304 -8 1320 239 28 30 chr2 58610110 58610307 -192077547 + L1M4 LINE L1 2425 2621 -3525 2240 89 3 0 chr2 58610307 58610623 -192077231 + AluSx SINE Alu 1 317 0 1320 239 28 30 chr2 58610623 58610892 -192076962 + L1M4 LINE L1 2621 2891 -3255 983 189 0 0 chr2 58610894 58611053 -192076801 + AluJb SINE Alu 1 159 -153 696 108 20 0 chr2 58611055 58611157 -192076697 - AluSq/x SINE Alu -208 104 1 352 176 12 24 chr2 58611259 58611344 -192076510 - L1M4 LINE L1 -3748 2398 2315 239 175 70 0 chr2 58611344 58611401 -192076453 - L1MB7 LINE L1 0 6184 6124 2082 128 3 7 chr2 58611404 58611700 -192076154 - AluSx SINE Alu -17 295 1 573 96 12 0 chr2 58612144 58612227 -192075627 + AluY SINE Alu 1 84 -226 2120 82 0 0 chr2 58612417 58612684 -192075170 - AluY SINE Alu -10 301 35 843 171 77 33 chr2 58612692 58612814 -192075040 - MER5A DNA MER1_type 0 189 55 2320 93 51 25 chr2 58612814 58613169 -192074685 + THE1B LTR MaLR 1 364 0 843 171 77 33 chr2 58613169 58613227 -192074627 - MER5A DNA MER1_type -134 55 1 526 197 137 71 chr2 58614181 58614364 -192073490 - MLT1L LTR MaLR 0 615 421 748 209 64 30 chr2 58614465 58614699 -192073155 - MLT1L LTR MaLR -339 276 35 966 151 0 65 chr2 58614818 58615004 -192072850 + FRAM SINE Alu 1 174 -2 745 183 71 18 chr2 58615307 58615476 -192072378 + L1MD2 LINE L1 6182 6359 0 268 186 70 147 chr2 58615763 58615892 -192071962 + L2 LINE L2 3194 3312 -1 2097 97 31 0 chr2 58616194 58616482 -192071372 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr2 58616482 58616504 -192071350 + AT_rich Low_complexity Low_complexity 1 22 0 187 285 48 85 chr2 58618267 58618432 -192069422 + L2 LINE L2 3102 3260 -12 2435 81 0 0 chr2 58619075 58619371 -192068483 - AluSg SINE Alu -14 296 1 1819 111 8 4 chr2 58619390 58619643 -192068211 - AluSx SINE Alu -9 303 50 2107 121 7 0 chr2 58619694 58619983 -192067871 - AluSx SINE Alu -21 291 1 2053 145 20 0 chr2 58620035 58620331 -192067523 + AluSx SINE Alu 1 302 -10 2316 116 3 0 chr2 58621223 58621534 -192066320 - AluSp SINE Alu -1 312 1 729 150 8 8 chr2 58621559 58621679 -192066175 - FLAM_C SINE Alu -19 124 5 243 390 24 0 chr2 58621704 58621786 -192066068 - MIR SINE MIR -86 122 39 5871 121 21 9 chr2 58621904 58622904 -192064950 - L1MC1 LINE L1 -20 6313 5302 292 239 60 0 chr2 58623559 58623626 -192064228 - MER94 DNA DNA 0 134 64 812 155 9 0 chr2 58623640 58623756 -192064098 - AluJb SINE Alu -195 117 1 239 268 14 0 chr2 58623763 58623834 -192064020 - MER94 DNA DNA -62 72 1 204 135 81 0 chr2 58624037 58624074 -192063780 + polypyrimidine Low_complexity Low_complexity 4 43 0 22 35 0 0 chr2 58625667 58625696 -192062158 + AT_rich Low_complexity Low_complexity 1 29 0 2109 101 22 0 chr2 58626062 58626363 -192061491 + AluSq SINE Alu 1 307 0 288 263 11 11 chr2 58626874 58626969 -192060885 + L1ME3A LINE L1 6067 6161 -9 622 185 108 8 chr2 58627072 58627202 -192060652 + FLAM_C SINE Alu 1 143 0 453 66 0 0 chr2 58627440 58627501 -192060353 + (TA)n Simple_repeat Simple_repeat 2 62 0 2099 131 0 0 chr2 58627507 58627798 -192060056 - AluSx SINE Alu -21 291 1 22 0 0 0 chr2 58627798 58627820 -192060034 + AT_rich Low_complexity Low_complexity 1 22 0 1732 165 0 26 chr2 58628786 58629089 -192058765 - AluJb SINE Alu -17 295 1 439 320 69 35 chr2 58629155 58629348 -192058506 + LTR16A LTR ERVL 121 331 -119 2215 116 3 0 chr2 58629348 58629649 -192058205 - AluSq SINE Alu -11 302 1 439 320 69 35 chr2 58629649 58629774 -192058080 + LTR16A LTR ERVL 331 450 0 403 197 124 15 chr2 58629840 58629977 -192057877 - L1MC5 LINE L1 -494 7467 7316 22 0 0 0 chr2 58630773 58630795 -192057059 + AT_rich Low_complexity Low_complexity 1 22 0 259 280 30 20 chr2 58630801 58630901 -192056953 - LTR67 LTR ERVL -21 536 436 911 178 69 21 chr2 58631113 58631386 -192056468 + Charlie5 DNA MER1_type 1 2585 -27 414 304 191 24 chr2 58631666 58632102 -192055752 - L2 LINE L2 -88 3225 2702 26 0 0 0 chr2 58632138 58632164 -192055690 + AT_rich Low_complexity Low_complexity 1 26 0 1981 145 22 64 chr2 58632725 58633132 -192054722 - MLT1B LTR MaLR 0 390 1 769 182 8 0 chr2 58633143 58633275 -192054579 - FLAM_A SINE Alu 0 133 1 1221 172 27 8 chr2 58634707 58634969 -192052885 + L1MD3 LINE L1 7729 7995 0 2084 128 10 0 chr2 58635219 58635507 -192052347 + AluSx SINE Alu 1 291 -21 2319 69 0 10 chr2 58635877 58636167 -192051687 - AluSg1 SINE Alu -20 289 3 1375 160 153 4 chr2 58636232 58636494 -192051360 - AluJo SINE Alu 0 302 2 2210 118 7 0 chr2 58636637 58636943 -192050911 - AluSg SINE Alu -2 308 1 2251 124 0 0 chr2 58637776 58638083 -192049771 - AluSx SINE Alu -5 307 1 758 216 108 0 chr2 58638497 58638682 -192049172 - L2 LINE L2 -2 3311 3107 1894 119 56 0 chr2 58638683 58638971 -192048883 + AluSp SINE Alu 1 303 0 1936 145 0 38 chr2 58638979 58639296 -192048558 + AluSx SINE Alu 1 305 -7 2147 133 3 3 chr2 58639653 58639953 -192047901 - AluSx SINE Alu -12 300 1 1988 156 42 3 chr2 58640001 58640335 -192047519 + MER7A DNA MER2_type 2 346 0 1591 147 15 19 chr2 58640346 58640611 -192047243 + AluJb SINE Alu 40 303 -9 357 351 55 5 chr2 58641829 58642031 -192045823 + L2 LINE L2 3062 3273 -40 2397 84 3 13 chr2 58642372 58642683 -192045171 + AluSq SINE Alu 1 308 -5 666 208 56 7 chr2 58643043 58643187 -192044667 + AluJo SINE Alu 85 235 -77 646 115 0 21 chr2 58643278 58643374 -192044480 + AluSg/x SINE Alu 203 296 -16 938 287 64 33 chr2 58643537 58643896 -192043958 + L2 LINE L2 2087 2456 -858 228 271 90 18 chr2 58643896 58644062 -192043792 - L1MC5 LINE L1 -171 7790 7613 2266 121 3 0 chr2 58644079 58644386 -192043468 - AluSx SINE Alu 0 312 5 291 298 93 43 chr2 58644471 58644632 -192043222 - L2 LINE L2 -150 3163 2995 * 3131 227 98 57 chr2 58644612 58645079 -192042775 - L2 LINE L2 -1303 2011 1565 2111 85 0 34 chr2 58645079 58645396 -192042458 + AluSx SINE Alu 1 307 0 3131 227 98 57 chr2 58645396 58646023 -192041831 - L2 LINE L2 -1749 1565 871 1192 106 0 6 chr2 58646165 58646326 -192041528 + AluSq SINE Alu 5 164 -149 2486 52 3 39 chr2 58646326 58646499 -192041355 - L1PA8A LINE L1 -498 5633 5478 2279 97 10 0 chr2 58646499 58646807 -192041047 + AluSx SINE Alu 1 311 -1 2486 52 3 39 chr2 58646807 58646995 -192040859 - L1PA8A LINE L1 -653 5478 5285 2503 57 0 0 chr2 58647140 58647436 -192040418 - AluY SINE Alu -15 296 1 954 187 0 0 chr2 58647674 58647824 -192040030 + FAM SINE Alu 10 159 -26 202 28 28 28 chr2 58647828 58647864 -192039990 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 232 259 54 82 chr2 58647881 58648028 -192039826 + HAL1 LINE L1 2359 2501 -6 348 192 13 26 chr2 58648912 58648990 -192038864 + MLT1I LTR MaLR 101 177 -232 231 206 92 84 chr2 58649036 58649167 -192038687 + MLT1I LTR MaLR 259 390 -19 361 222 54 42 chr2 58649190 58649357 -192038497 + L1MEd LINE L1 34 202 -5917 2227 113 3 0 chr2 58649434 58649727 -192038127 - AluSx SINE Alu -18 294 1 469 92 0 0 chr2 58650209 58650274 -192037580 + U6 snRNA snRNA 1 65 -42 448 232 40 34 chr2 58650274 58650451 -192037403 - MER112 DNA MER1_type -82 178 1 2340 197 14 29 chr2 58650654 58651167 -192036687 - MLT1D LTR MaLR 0 505 1 26 0 0 0 chr2 58652522 58652548 -192035306 + AT_rich Low_complexity Low_complexity 1 26 0 24 32 0 0 chr2 58652679 58652710 -192035144 + AT_rich Low_complexity Low_complexity 1 31 0 2066 121 36 0 chr2 58652710 58652991 -192034863 - AluSx SINE Alu -21 291 1 374 280 7 13 chr2 58653040 58653161 -192034693 + LTR33A LTR ERVL 44 158 -363 351 214 138 13 chr2 58653300 58653459 -192034395 + LTR33A LTR ERVL 340 518 -5 4391 206 58 19 chr2 58653840 58654563 -192033291 - L1M4 LINE L1 -863 5283 4589 2091 153 0 6 chr2 58654563 58654876 -192032978 + AluJb SINE Alu 1 311 -1 2144 119 3 3 chr2 58654876 58655179 -192032675 + AluSq SINE Alu 1 303 -10 4391 206 58 19 chr2 58655179 58655733 -192032121 - L1M4 LINE L1 -1556 4590 3956 21 0 0 0 chr2 58656146 58656167 -192031687 + AT_rich Low_complexity Low_complexity 1 21 0 242 239 273 0 chr2 58657572 58657660 -192030194 + L2 LINE L2 3200 3311 -2 443 236 57 0 chr2 58659070 58659176 -192028678 - L2 LINE L2 -1 3271 3160 344 158 0 66 chr2 58659436 58659512 -192028342 - AluJ/FRAM SINE Alu -5 297 227 1859 160 10 3 chr2 58659570 58659870 -192027984 + AluJo SINE Alu 1 302 -10 2113 108 20 3 chr2 58660259 58660555 -192027299 + AluSx SINE Alu 1 301 -11 2082 119 7 13 chr2 58660555 58660865 -192026989 + AluSx SINE Alu 1 308 -4 1716 113 36 0 chr2 58661515 58661762 -192026092 + AluSg1 SINE Alu 41 296 -13 201 322 0 0 chr2 58664148 58664207 -192023647 - MIR3 SINE MIR -13 195 137 201 39 0 0 chr2 58664882 58664908 -192022946 + (CAAAAA)n Simple_repeat Simple_repeat 4 29 0 1804 135 57 7 chr2 58664919 58665200 -192022654 + AluSx SINE Alu 14 308 -4 499 241 58 52 chr2 58665206 58665305 -192022549 + MIR SINE MIR 88 191 -71 2172 112 0 0 chr2 58665305 58665620 -192022234 + AluSq SINE Alu 1 315 0 499 241 58 52 chr2 58665620 58665693 -192022161 + MIR SINE MIR 191 262 0 519 372 84 49 chr2 58666247 58666868 -192020986 - L2 LINE L2 -1 3271 2625 5341 140 39 1 chr2 58667369 58668289 -192019565 - Tigger1 DNA MER2_type -1 2417 1463 3046 176 96 19 chr2 58668289 58669069 -192018785 + MER21B LTR ERV1 1 931 0 1749 96 19 61 chr2 58669069 58669215 -192018639 - Tigger1 DNA MER2_type -955 1463 1333 2218 100 0 0 chr2 58669215 58669518 -192018336 - AluSg SINE Alu 0 303 1 1749 96 19 61 chr2 58669518 58669680 -192018174 - Tigger1 DNA MER2_type -1085 1333 1166 4763 140 40 47 chr2 58670517 58671098 -192016756 - Tigger1 DNA MER2_type -1237 1181 608 1780 189 3 7 chr2 58671098 58671404 -192016450 + AluJb SINE Alu 7 311 -1 4763 140 40 47 chr2 58671404 58671794 -192016060 - Tigger1 DNA MER2_type -1810 608 217 482 224 0 0 chr2 58671795 58671880 -192015974 + FRAM/FAM SINE Alu 1 84 -92 243 255 0 0 chr2 58671880 58671931 -192015923 - AluJ/monomer SINE Alu -248 51 1 405 239 0 0 chr2 58671948 58672057 -192015797 + L1M4 LINE L1 3472 3580 -2566 1795 193 112 31 chr2 58672079 58672535 -192015319 + MLT1D LTR MaLR 12 504 -1 309 131 66 0 chr2 58672535 58672596 -192015258 + MER52A LTR ERV1 1 65 -1690 459 275 29 12 chr2 58672597 58672768 -192015086 + MER52A LTR ERV1 224 397 -1358 3871 156 131 189 chr2 58672771 58673785 -192014069 + MER52A LTR ERV1 216 1278 0 1600 198 22 29 chr2 58673863 58674240 -192013614 - AluJo SINE Alu 0 375 1 347 194 97 121 chr2 58674326 58674477 -192013377 - L1MC5 LINE L1 -30 7931 7787 1943 180 0 0 chr2 58674477 58674782 -192013072 - AluSx SINE Alu -7 305 1 347 194 97 121 chr2 58674782 58674878 -192012976 - L1MC5 LINE L1 -174 7787 7690 2186 128 7 0 chr2 58674958 58675263 -192012591 + AluSx SINE Alu 3 309 -3 271 40 20 40 chr2 58675392 58675442 -192012412 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 2104 124 0 0 chr2 58675446 58675728 -192012126 - AluSq SINE Alu -31 282 1 229 204 0 0 chr2 58675762 58675811 -192012043 + L1MEc LINE L1 1616 1664 -4732 2186 116 3 6 chr2 58675850 58676161 -192011693 + AluSx SINE Alu 1 310 -2 2261 123 7 0 chr2 58676456 58676766 -192011088 + AluSx SINE Alu 1 312 0 629 283 120 24 chr2 58676783 58677373 -192010481 + L1MEc LINE L1 2456 3102 -3113 306 301 36 0 chr2 58677588 58677671 -192010183 + L2 LINE L2 3226 3311 -2 35 41 0 0 chr2 58677895 58677944 -192009910 + AT_rich Low_complexity Low_complexity 1 49 0 226 368 0 11 chr2 58678489 58678584 -192009270 + L2 LINE L2 940 1033 -2281 944 204 136 55 chr2 58678599 58678719 -192009135 - Charlie1 DNA MER1_type -6 2755 2646 2233 97 20 0 chr2 58678719 58679017 -192008837 + AluSx SINE Alu 5 308 -4 944 204 136 55 chr2 58679017 58679278 -192008576 - Charlie1 DNA MER1_type -115 2646 2343 227 225 38 12 chr2 58679519 58679599 -192008255 + L1MEc LINE L1 78 159 -6237 387 321 105 19 chr2 58679621 58679783 -192008071 + L1MEc LINE L1 223 398 -5998 656 223 0 0 chr2 58679821 58679951 -192007903 + FLAM_C SINE Alu 9 138 -5 1036 296 63 33 chr2 58679961 58680741 -192007113 + L1MEc LINE L1 418 1220 -5176 736 235 57 70 chr2 58680782 58681097 -192006757 - L1MC4 LINE L1 -313 7729 7419 461 311 84 38 chr2 58681097 58681646 -192006208 - L1M4 LINE L1 -1301 4845 4272 473 311 108 46 chr2 58681700 58682025 -192005829 - L1M4 LINE L1 -1201 4945 4601 2137 112 10 26 chr2 58682236 58682549 -192005305 - AluSc SINE Alu -1 308 1 457 239 166 28 chr2 58682620 58682867 -192004987 - L1M4 LINE L1 -1898 4248 3968 874 207 35 6 chr2 58682906 58683080 -192004774 - FRAM SINE Alu -3 173 1 3876 25 0 6 chr2 58683089 58683564 -192004290 - L1PA4 LINE L1 -206 5949 5478 1767 37 0 0 chr2 58683564 58683777 -192004077 + L1PA4 LINE L1 5942 6155 0 2337 113 0 0 chr2 58683792 58684101 -192003753 - AluSx SINE Alu -3 309 1 582 218 0 32 chr2 58684110 58684234 -192003620 - FLAM_A SINE Alu -13 120 1 208 413 11 0 chr2 58684431 58684523 -192003331 + L2 LINE L2 3142 3234 -38 2499 78 0 0 chr2 58685546 58685853 -192002001 + AluY SINE Alu 3 309 -2 1056 224 24 8 chr2 58685900 58686146 -192001708 - MLT1E1 LTR MaLR 0 654 405 1292 114 6 0 chr2 58686170 58686346 -192001508 + AluSx SINE Alu 1 177 -135 1614 161 16 0 chr2 58686687 58686935 -192000919 - AluSx SINE Alu -24 288 37 416 288 101 123 chr2 58687022 58687608 -192000246 + HAL1 LINE L1 79 651 -1856 3928 162 47 44 chr2 58687732 58688343 -191999511 - L1MB7 LINE L1 -26 6158 5550 1530 170 73 7 chr2 58688343 58688631 -191999223 - AluJb SINE Alu -5 307 1 3928 162 47 44 chr2 58688631 58689276 -191998578 - L1MB7 LINE L1 -634 5550 4902 2502 84 0 0 chr2 58689276 58689587 -191998267 + AluY SINE Alu 1 311 0 3928 162 47 44 chr2 58689587 58689634 -191998220 - L1MB7 LINE L1 -1282 4902 4857 994 131 0 0 chr2 58689741 58689878 -191997976 + AluSx SINE Alu 33 169 -143 389 225 140 40 chr2 58689903 58690103 -191997751 + L1MC4a LINE L1 5649 5868 -1940 366 156 156 71 chr2 58690779 58690920 -191996934 + HAL1 LINE L1 2355 2507 0 707 215 39 94 chr2 58690930 58691061 -191996793 - MIR SINE MIR 0 262 125 1586 170 14 4 chr2 58691061 58691337 -191996517 + AluJb SINE Alu 1 279 -33 183 80 0 0 chr2 58691338 58691363 -191996491 + (CGA)n Simple_repeat Simple_repeat 3 27 0 707 215 39 94 chr2 58691363 58691462 -191996392 - MIR SINE MIR -136 126 43 1629 156 11 8 chr2 58691480 58691743 -191996111 - AluJb SINE Alu -21 291 28 367 348 60 20 chr2 58692280 58692481 -191995373 + L1ME LINE L1 5387 5595 -526 2066 69 0 0 chr2 58692641 58692911 -191994943 + AluSc SINE Alu 37 306 0 2374 92 7 0 chr2 58693345 58693651 -191994203 + AluSp SINE Alu 3 310 -3 1598 125 227 11 chr2 58693717 58694069 -191993785 + MSTA LTR MaLR 1 428 0 8991 112 56 62 chr2 58694071 58694117 -191993737 + MSTA-int LTR MaLR 3 48 -1532 2069 134 0 0 chr2 58694117 58694408 -191993446 + AluSx SINE Alu 1 291 -21 8991 112 56 62 chr2 58694408 58694774 -191993080 + MSTA-int LTR MaLR 48 415 -1165 2352 110 0 0 chr2 58694774 58695084 -191992770 + AluSg SINE Alu 1 310 0 8991 112 56 62 chr2 58695084 58696257 -191991597 + MSTA-int LTR MaLR 415 1580 0 1494 157 173 52 chr2 58696257 58696417 -191991437 + MSTA LTR MaLR 1 140 -288 2233 128 0 3 chr2 58696417 58696723 -191991131 + AluSx SINE Alu 1 305 -7 1494 157 173 52 chr2 58696723 58696944 -191990910 + MSTA LTR MaLR 140 428 0 217 279 76 13 chr2 58696964 58697043 -191990811 - L3 LINE CR1 -2 1575 1492 404 306 182 23 chr2 58697101 58697359 -191990495 - L3 LINE CR1 -224 1353 1055 1848 165 7 3 chr2 58697653 58697950 -191989904 - AluJb SINE Alu -13 299 2 26 0 0 0 chr2 58697954 58697980 -191989874 + AT_rich Low_complexity Low_complexity 1 26 0 2062 122 0 14 chr2 58698930 58699224 -191988630 - AluSx SINE Alu -22 290 1 29 47 0 0 chr2 58699228 58699271 -191988583 + AT_rich Low_complexity Low_complexity 1 43 0 23 68 0 0 chr2 58699688 58699732 -191988122 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr2 58699847 58699868 -191987986 + AT_rich Low_complexity Low_complexity 1 21 0 760 190 0 6 chr2 58700460 58700720 -191987134 + AluJo SINE Alu 1 308 -4 564 243 97 15 chr2 58700817 58701076 -191986778 + HAL1 LINE L1 2101 2380 -127 2032 92 60 14 chr2 58701090 58701374 -191986480 + AluSg1 SINE Alu 1 297 -12 1657 177 10 17 chr2 58702977 58703276 -191984578 + AluJo SINE Alu 1 297 -15 207 162 0 0 chr2 58703276 58703313 -191984541 + (TA)n Simple_repeat Simple_repeat 2 38 0 241 127 0 0 chr2 58703315 58703370 -191984484 + LTR66 LTR ERVL 394 448 -162 5649 172 81 20 chr2 58703868 58704553 -191983301 - Charlie1a DNA MER1_type -1307 1454 812 2424 75 0 0 chr2 58704553 58704845 -191983009 + AluY SINE Alu 1 292 -19 5649 172 81 20 chr2 58704845 58705529 -191982325 - Charlie1a DNA MER1_type -1949 812 1 22 56 0 0 chr2 58706350 58706386 -191981468 + AT_rich Low_complexity Low_complexity 1 36 0 2090 108 10 7 chr2 58706566 58706854 -191981000 - AluSx SINE Alu -23 289 1 1705 151 151 3 chr2 58707376 58707667 -191980187 + MER1B DNA MER1_type 4 337 0 2130 113 3 10 chr2 58707703 58708003 -191979851 + AluY SINE Alu 1 298 -13 1862 150 3 17 chr2 58708300 58708600 -191979254 + AluSx SINE Alu 3 298 -14 1826 164 10 13 chr2 58708756 58709055 -191978799 + AluJb SINE Alu 1 298 -14 2100 126 0 0 chr2 58709148 58709433 -191978421 + AluSx SINE Alu 1 285 -27 216 0 0 0 chr2 58709441 58709465 -191978389 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 2292 101 0 0 chr2 58709545 58709843 -191978011 - AluSx SINE Alu -14 298 1 226 339 55 11 chr2 58709931 58710114 -191977740 + L2 LINE L2 740 930 -2384 614 167 19 0 chr2 58710134 58710242 -191977612 + MER41B LTR ERV1 3 112 -523 203 147 0 0 chr2 58710742 58710776 -191977078 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 886 108 8 16 chr2 58710853 58710982 -191976872 + FLAM_C SINE Alu 5 132 -11 1224 108 23 6 chr2 58711349 58711525 -191976329 - L1PB1 LINE L1 -1 6150 5972 317 269 132 47 chr2 58711681 58712023 -191975831 + L1M4 LINE L1 4312 4682 -1464 1809 149 0 49 chr2 58712065 58712373 -191975481 - AluJo SINE Alu -19 293 1 26 0 0 0 chr2 58712488 58712514 -191975340 + AT_rich Low_complexity Low_complexity 1 26 0 495 0 0 0 chr2 58712547 58712602 -191975252 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 2195 122 0 3 chr2 58712647 58712943 -191974911 + AluSx SINE Alu 1 295 -17 1432 147 0 133 chr2 58713300 58713653 -191974201 - AluJo SINE Alu -6 306 1 2028 136 0 19 chr2 58714003 58714320 -191973534 - AluJb SINE Alu -1 311 1 852 107 0 0 chr2 58714571 58714693 -191973161 - AluSc SINE Alu -5 304 183 985 160 24 58 chr2 58715120 58715190 -191972664 - MER3 DNA MER1_type 0 209 138 2116 128 3 0 chr2 58715190 58715487 -191972367 + AluSx SINE Alu 1 298 -14 985 160 24 58 chr2 58715487 58715622 -191972232 - MER3 DNA MER1_type -71 138 11 809 160 0 8 chr2 58716539 58716664 -191971190 + AluJo/FLAM SINE Alu 1 124 -188 283 116 4 38 chr2 58716665 58716723 -191971131 - Alu SINE Alu -2 298 249 2137 126 3 0 chr2 58716763 58717056 -191970798 - AluSq SINE Alu -19 294 1 1779 162 10 13 chr2 58717101 58717410 -191970444 - AluJo SINE Alu -4 308 1 311 274 90 68 chr2 58717427 58717618 -191970236 + L1ME4a LINE L1 4099 4297 -1849 2303 65 0 77 chr2 58717618 58717943 -191969911 + AluY SINE Alu 1 300 -11 311 274 90 68 chr2 58717943 58717985 -191969869 + L1ME4a LINE L1 4297 4337 -1809 335 317 71 33 chr2 58718031 58718214 -191969640 + L1ME4a LINE L1 4428 4617 -1529 752 290 103 46 chr2 58718765 58719174 -191968680 + L1ME4a LINE L1 5379 5846 -275 1784 163 3 3 chr2 58719174 58719490 -191968364 - AluJb SINE Alu 0 316 1 752 290 103 46 chr2 58719490 58719767 -191968087 + L1ME4a LINE L1 5846 6106 -15 386 180 16 113 chr2 58719977 58720171 -191967683 + Charlie7 DNA MER1_type 2437 2611 -1 22 0 0 0 chr2 58721069 58721091 -191966763 + AT_rich Low_complexity Low_complexity 1 22 0 266 279 90 18 chr2 58721296 58721407 -191966447 - L2 LINE L2 0 3272 3154 1365 187 12 32 chr2 58721685 58721809 -191966045 - Tigger5 DNA MER2_type -177 241 123 1950 136 185 19 chr2 58721809 58722176 -191965678 + MSTA LTR MaLR 1 428 0 1365 187 12 32 chr2 58722176 58722297 -191965557 - Tigger5 DNA MER2_type -295 123 1 6419 188 27 60 chr2 58722297 58722707 -191965147 + L1MB5 LINE L1 3746 4168 -2006 2389 110 0 0 chr2 58722707 58723017 -191964837 + AluSx SINE Alu 1 310 -2 6419 188 27 60 chr2 58723017 58723610 -191964244 + L1MB5 LINE L1 4168 4779 -1395 2157 138 0 0 chr2 58723610 58723921 -191963933 - AluSx SINE Alu -1 311 1 6419 188 27 60 chr2 58723921 58723960 -191963894 + L1MB5 LINE L1 4779 4818 -1356 2033 109 40 0 chr2 58723960 58724235 -191963619 + AluSg SINE Alu 1 286 -24 6419 188 27 60 chr2 58724235 58724561 -191963293 + L1MB5 LINE L1 4818 5153 -1021 2358 94 10 3 chr2 58724561 58724870 -191962984 + AluSq SINE Alu 1 311 -2 441 0 0 0 chr2 58724873 58724922 -191962932 + (TA)n Simple_repeat Simple_repeat 1 49 0 6419 188 27 60 chr2 58724922 58725085 -191962769 + L1MB5 LINE L1 5155 5322 -852 1398 190 9 52 chr2 58725085 58725411 -191962443 + AluJo SINE Alu 1 312 0 6419 188 27 60 chr2 58725411 58725550 -191962304 + L1MB5 LINE L1 5322 5464 -710 1357 176 60 39 chr2 58725550 58725834 -191962020 + AluJo SINE Alu 1 290 -22 6419 188 27 60 chr2 58725834 58726658 -191961196 + L1MB5 LINE L1 5464 6168 -6 2401 99 0 6 chr2 58727099 58727413 -191960441 - AluSx SINE Alu 0 312 1 973 260 64 108 chr2 58727476 58728011 -191959843 + MLT1J LTR MaLR 1 511 0 300 252 114 24 chr2 58728013 58728136 -191959718 - MIR SINE MIR -121 141 8 236 300 12 62 chr2 58728507 58728587 -191959267 - L2 LINE L2 0 3272 3197 1116 181 12 0 chr2 58728674 58728845 -191959009 - FAM SINE Alu -2 173 1 292 387 190 4 chr2 58729061 58729253 -191958601 + L2 LINE L2 2428 2583 -731 1661 174 44 98 chr2 58729253 58729661 -191958193 - MLT1B LTR MaLR -4 386 1 292 387 190 4 chr2 58729661 58729737 -191958117 + L2 LINE L2 2583 2746 -568 364 77 138 0 chr2 58729974 58730039 -191957815 + L1MB3 LINE L1 6078 6151 -32 767 131 0 19 chr2 58730041 58730135 -191957719 + AluSq/x SINE Alu 2 95 -217 2159 128 0 0 chr2 58730135 58730431 -191957423 - AluSx SINE Alu -14 298 3 767 131 0 19 chr2 58730431 58730443 -191957411 + AluSq/x SINE Alu 95 106 -206 545 236 24 24 chr2 58730877 58731042 -191956812 + L1MC5 LINE L1 7749 7913 -48 238 286 66 22 chr2 58731228 58731319 -191956535 - MLT1K LTR MaLR -492 96 2 376 308 25 25 chr2 58731552 58731711 -191956143 + MER5A DNA MER1_type 8 166 -23 * 1007 158 18 6 chr2 58731580 58731745 -191956109 - MER5A DNA MER1_type -22 167 1 258 362 37 32 chr2 58731753 58731941 -191955913 - MER5A DNA MER1_type 0 189 1 1723 156 24 17 chr2 58732092 58732381 -191955473 + AluJb SINE Alu 1 291 -21 292 331 68 31 chr2 58732461 58732623 -191955231 + L1ME4a LINE L1 5437 5604 -517 1701 171 7 0 chr2 58732644 58732919 -191954935 + AluJo SINE Alu 1 277 -35 274 23 47 0 chr2 58732923 58732966 -191954888 + (TA)n Simple_repeat Simple_repeat 1 45 0 2030 107 0 7 chr2 58732966 58733266 -191954588 + AluSc SINE Alu 1 298 0 34 42 0 0 chr2 58733278 58733326 -191954528 + AT_rich Low_complexity Low_complexity 1 48 0 1236 145 197 20 chr2 58733345 58733594 -191954260 - AluSc SINE Alu -3 296 4 381 314 32 0 chr2 58733607 58733763 -191954091 + L1ME4a LINE L1 5616 5776 -345 445 260 101 49 chr2 58734433 58734721 -191953133 + L1ME4a LINE L1 5816 6118 -3 768 277 68 73 chr2 58734733 58735173 -191952681 - MLT1K LTR MaLR -10 578 141 818 199 0 0 chr2 58735246 58735377 -191952477 + AluJo/FLAM SINE Alu 1 131 -171 1942 148 13 3 chr2 58735379 58735677 -191952177 + AluSx SINE Alu 1 301 -11 915 144 0 0 chr2 58736659 58736826 -191951028 + (TTCCC)n Simple_repeat Simple_repeat 2 168 0 1603 123 13 8 chr2 58736864 58737100 -191950754 - AluSg/x SINE Alu 0 310 74 2156 108 7 0 chr2 58737153 58737439 -191950415 - AluSp SINE Alu -15 298 11 1369 154 50 43 chr2 58737485 58737793 -191950061 - AluJb SINE Alu 0 310 1 911 85 39 0 chr2 58737936 58738065 -191949789 + MER41A LTR ERV1 421 554 0 230 344 78 59 chr2 58738202 58738458 -191949396 + L2 LINE L2 1116 1376 -1938 * 284 219 55 144 chr2 58738454 58738600 -191949254 + L2 LINE L2 2919 3051 -221 854 319 69 29 chr2 58738851 58738949 -191948905 + MER115 DNA AcHobo 42 135 -558 2332 93 7 0 chr2 58738949 58739251 -191948603 - AluSx SINE Alu -8 304 1 854 319 69 29 chr2 58739251 58739528 -191948326 + MER115 DNA AcHobo 135 432 -261 578 272 114 0 chr2 58739568 58739752 -191948102 + MER115 DNA AcHobo 488 692 -1 1450 171 36 62 chr2 58739813 58740118 -191947736 + AluJo SINE Alu 1 297 -15 2158 119 0 19 chr2 58740704 58741014 -191946840 + AluSx SINE Alu 3 306 -6 234 324 0 0 chr2 58741305 58741376 -191946478 - L2 LINE L2 -1 3271 3201 2095 165 37 9 chr2 58741578 58741906 -191945948 + MER1B DNA MER1_type 1 337 0 327 243 271 40 chr2 58741953 58742130 -191945724 - MIR SINE MIR -3 259 42 1798 163 0 17 chr2 58742130 58742443 -191945411 + AluJo SINE Alu 1 308 0 200 159 0 175 chr2 58742529 58742592 -191945262 - L2 LINE L2 -58 3214 3163 240 291 205 8 chr2 58742592 58742709 -191945145 - MIR SINE MIR -76 186 47 364 201 82 107 chr2 58742768 58742905 -191944949 - L2 LINE L2 0 3313 3179 1797 144 56 0 chr2 58742905 58743189 -191944665 + AluJb SINE Alu 13 312 0 364 201 82 107 chr2 58743189 58743210 -191944644 - L2 LINE L2 -134 3179 3159 185 194 28 0 chr2 58743217 58743253 -191944601 + L3 LINE CR1 1530 1566 -11 2350 81 3 7 chr2 58743993 58744290 -191943564 + AluY SINE Alu 1 296 -15 825 168 123 13 chr2 58744376 58744531 -191943323 + FAM SINE Alu 1 172 -3 2426 218 108 21 chr2 58744558 58745637 -191942217 + L1MEc LINE L1 65 1298 -5098 459 73 0 0 chr2 58745637 58745705 -191942149 + (TA)n Simple_repeat Simple_repeat 2 69 0 2426 218 108 21 chr2 58745705 58745809 -191942045 + L1MEc LINE L1 1298 1392 -5004 183 80 0 0 chr2 58746116 58746141 -191941713 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 448 264 101 0 chr2 58750233 58750362 -191937492 + MIR SINE MIR 14 155 -107 689 190 0 8 chr2 58750693 58750814 -191937040 - FLAM_A SINE Alu -13 120 1 2128 109 20 3 chr2 58750825 58751129 -191936725 - AluSq SINE Alu -4 309 1 387 0 0 0 chr2 58751546 58751589 -191936265 + (CA)n Simple_repeat Simple_repeat 1 43 0 2618 156 43 11 chr2 58752324 58752787 -191935067 + L1MB8 LINE L1 5701 6178 0 219 221 13 9 chr2 58752976 58753029 -191934825 + MIR SINE MIR 91 145 -63 389 289 86 13 chr2 58753247 58753399 -191934455 + L2 LINE L2 2928 3090 -182 2387 93 0 0 chr2 58754039 58754341 -191933513 + AluSg SINE Alu 1 302 -8 881 173 81 25 chr2 58754849 58755046 -191932808 + AluJb SINE Alu 88 295 -17 2198 150 18 9 chr2 58755095 58755429 -191932425 - MER1B DNA MER1_type 0 337 1 2063 100 4 0 chr2 58756004 58756275 -191931579 - AluSx SINE Alu -36 276 5 464 212 51 17 chr2 58756278 58756396 -191931458 + Charlie1 DNA MER1_type 2634 2755 -6 1687 100 125 18 chr2 58756973 58757252 -191930602 - AluSg1 SINE Alu 0 309 1 919 125 48 36 chr2 58758008 58758176 -191929678 - L1MA9 LINE L1 -8 6304 6135 579 191 0 27 chr2 58758177 58758248 -191929606 - U6 snRNA snRNA 0 107 39 2000 164 0 0 chr2 58758248 58758552 -191929302 - AluSx SINE Alu -8 304 1 579 191 0 27 chr2 58758552 58758590 -191929264 - U6 snRNA snRNA -68 39 1 285 333 48 12 chr2 58758895 58759063 -191928791 + MLT1K LTR MaLR 389 562 -26 888 81 0 0 chr2 58759499 58759610 -191928244 - AluSg/x SINE Alu -13 296 186 2146 119 0 3 chr2 58760159 58760453 -191927401 - AluSq SINE Alu -20 293 1 1987 135 3 3 chr2 58760784 58761073 -191926781 + AluSg SINE Alu 6 294 -16 4227 155 32 12 chr2 58761608 58762285 -191925569 + LTR8 LTR ERV1 1 691 0 313 218 40 113 chr2 58762903 58762982 -191924872 - MER5B DNA MER1_type -6 172 103 783 193 143 0 chr2 58762982 58763143 -191924711 + MER5A DNA MER1_type 1 184 -5 280 261 141 11 chr2 58763149 58763241 -191924613 + MER5B DNA MER1_type 75 178 0 632 203 75 0 chr2 58763590 58763723 -191924131 + MER5B DNA MER1_type 6 148 -30 292 228 47 39 chr2 58763950 58764077 -191923777 + L1MC5 LINE L1 7784 7911 -50 335 226 94 9 chr2 58764093 58764199 -191923655 + L1 LINE L1 3272 3386 -2760 40642 71 7 6 chr2 58764238 58770005 -191917849 + L1PA3 LINE L1 11 5779 -376 486 45 45 127 chr2 58770005 58770102 -191917752 + AluYa5/8 SINE Alu 210 299 -11 3489 26 0 3 chr2 58770102 58770486 -191917368 + L1PA3 LINE L1 5770 6152 -3 486 45 45 127 chr2 58770486 58770498 -191917356 + AluYa5/8 SINE Alu 299 310 0 3250 209 120 40 chr2 58770499 58771353 -191916501 - L1MC4a LINE L1 -127 7681 6742 1724 158 12 43 chr2 58771353 58771675 -191916179 - AluSx SINE Alu 0 312 1 3250 209 120 40 chr2 58771675 58771771 -191916083 - L1MC4a LINE L1 -1066 6742 6655 482 263 88 7 chr2 58771778 58771908 -191915946 - MIR SINE MIR -97 165 22 2163 116 7 3 chr2 58771908 58772210 -191915644 - AluSx SINE Alu -9 303 1 868 154 31 62 chr2 58772967 58773162 -191914692 - L1MA9 LINE L1 -8 6304 6116 325 180 0 0 chr2 58773163 58773224 -191914630 - U6 snRNA snRNA -27 80 20 2245 112 0 0 chr2 58773232 58773527 -191914327 - AluSx SINE Alu -17 295 1 263 146 18 0 chr2 58774371 58774426 -191913428 - L1MC4 LINE L1 0 8042 7987 2030 139 13 0 chr2 58774426 58774728 -191913126 + AluJo SINE Alu 1 306 -6 758 299 141 7 chr2 58774875 58775166 -191912688 - MER68 LTR ERV1 -4 558 229 24 0 0 0 chr2 58775888 58775912 -191911942 + AT_rich Low_complexity Low_complexity 1 24 0 2076 139 0 0 chr2 58775913 58776208 -191911646 + AluJb SINE Alu 1 295 -17 749 206 19 6 chr2 58776413 58776573 -191911281 - MER5A DNA MER1_type -2 187 26 180 0 0 0 chr2 58777529 58777549 -191910305 + (TA)n Simple_repeat Simple_repeat 1 20 0 505 235 31 42 chr2 58777566 58777725 -191910129 - MIR SINE MIR -50 212 57 742 106 16 8 chr2 58777733 58777856 -191909998 + L1MA4A LINE L1 6179 6302 -1 23 0 0 0 chr2 58778290 58778313 -191909541 + AT_rich Low_complexity Low_complexity 1 23 0 1633 189 13 10 chr2 58778944 58779250 -191908604 + AluJo SINE Alu 1 307 -5 331 316 26 53 chr2 58779449 58779601 -191908253 + MIR3 SINE MIR 56 203 -5 2007 147 3 3 chr2 58779641 58779934 -191907920 - AluSx SINE Alu -19 293 1 21 57 0 0 chr2 58780355 58780390 -191907464 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 58833962 58833983 -191853871 + AT_rich Low_complexity Low_complexity 1 21 0 822 164 1 3 chr2 58834341 58834493 -191853361 + L1MB7 LINE L1 5717 5866 -318 271 295 11 42 chr2 58834527 58834622 -191853232 + L2 LINE L2 943 1034 -2280 232 45 0 45 chr2 58834631 58834675 -191853179 + (TTTTTA)n Simple_repeat Simple_repeat 4 45 0 6379 34 12 4 chr2 58834686 58835423 -191852431 - SVA Other Other -2 1384 642 285 239 0 0 chr2 58835428 58835499 -191852355 + L2 LINE L2 1037 1107 -2207 476 296 175 27 chr2 58835616 58835873 -191851981 - L2 LINE L2 -557 2757 2463 297 289 202 0 chr2 58835902 58836075 -191851779 - L2 LINE L2 -980 2334 2127 887 301 114 11 chr2 58836145 58836600 -191851254 + LTR33 LTR ERVL 1 502 -19 434 275 42 47 chr2 58836634 58836827 -191851027 - L1MCc LINE L1 -5426 997 806 805 198 93 47 chr2 58837484 58837741 -191850113 - MLT1A2 LTR MaLR -72 302 34 1933 117 64 7 chr2 58837741 58838022 -191849832 - AluSx SINE Alu -9 303 7 253 96 77 115 chr2 58838027 58838079 -191849775 - MLT1A2 LTR MaLR -324 50 1 695 297 78 34 chr2 58838079 58838436 -191849418 + L2 LINE L2 1103 1475 -1839 1885 148 26 22 chr2 58838436 58838747 -191849107 + AluSx SINE Alu 1 312 0 2184 168 16 47 chr2 58839349 58839669 -191848185 + LTR52 LTR ERVL 3 308 -113 2191 107 3 3 chr2 58839669 58839967 -191847887 + AluSx SINE Alu 1 298 -14 2184 168 16 47 chr2 58839967 58840075 -191847779 + LTR52 LTR ERVL 308 418 -3 2362 91 3 3 chr2 58840335 58840643 -191847211 + AluSp SINE Alu 1 308 -5 421 255 102 30 chr2 58841131 58841366 -191846488 + L1MCc LINE L1 67 318 -6105 880 176 38 6 chr2 58841367 58841526 -191846328 + MLT1A2 LTR MaLR 1 164 -210 354 183 0 39 chr2 58841550 58841654 -191846200 + CT-rich Low_complexity Low_complexity 1 100 0 683 204 59 65 chr2 58841675 58841800 -191846054 + MLT1A2 LTR MaLR 190 315 -59 2090 108 10 3 chr2 58841800 58842097 -191845757 + AluSg SINE Alu 1 299 -11 683 204 59 65 chr2 58842097 58842157 -191845697 + MLT1A2 LTR MaLR 315 374 0 414 307 66 33 chr2 58842180 58842424 -191845430 + L1MCc LINE L1 337 588 -5835 687 209 0 8 chr2 58842447 58842581 -191845273 + FLAM_A SINE Alu 1 133 0 401 72 9 72 chr2 58842636 58842747 -191845107 + (GGGGA)n Simple_repeat Simple_repeat 5 108 0 350 337 0 0 chr2 58842879 58842980 -191844874 + C-rich Low_complexity Low_complexity 1 101 0 218 191 0 0 chr2 58843104 58843146 -191844708 + GA-rich Low_complexity Low_complexity 4 45 0 347 256 74 8 chr2 58843410 58843531 -191844323 + MER103 DNA DNA 36 164 -2 824 181 0 0 chr2 58843986 58844113 -191843741 - FLAM_C SINE Alu -16 127 1 463 339 17 11 chr2 58844113 58844293 -191843561 - L2 LINE L2 -959 2355 2175 33 66 0 0 chr2 58844500 58844561 -191843293 + AT_rich Low_complexity Low_complexity 1 61 0 713 300 85 12 chr2 58844580 58844910 -191842944 + L1MC4a LINE L1 5283 5636 -2172 426 281 92 22 chr2 58844927 58845112 -191842742 + L1MC4a LINE L1 5786 5983 -1825 183 77 128 26 chr2 58845364 58845403 -191842451 + L3 LINE CR1 1530 1572 -5 2064 124 0 10 chr2 58845448 58845747 -191842107 + AluSx SINE Alu 2 297 -15 200 98 0 98 chr2 58845950 58846001 -191841853 + (TAAAAA)n Simple_repeat Simple_repeat 1 46 0 1714 121 98 4 chr2 58846157 58846442 -191841412 + AluSg SINE Alu 1 309 0 2163 118 7 0 chr2 58847142 58847431 -191840423 + AluSx SINE Alu 1 291 -21 743 134 71 39 chr2 58847445 58847572 -191840282 + FLAM_C SINE Alu 1 131 -2 2717 23 0 3 chr2 58847943 58848244 -191839610 + AluY SINE Alu 1 300 -11 368 292 75 33 chr2 58849278 58849398 -191838456 + L2 LINE L2 3148 3272 0 1548 177 35 14 chr2 58849515 58849803 -191838051 - AluJo SINE Alu -18 294 1 1570 191 17 7 chr2 58850138 58850431 -191837423 - AluJo SINE Alu -16 296 1 2410 65 10 10 chr2 58850633 58850941 -191836913 - AluY SINE Alu -3 308 1 2236 102 0 0 chr2 58851126 58851419 -191836435 + AluSg SINE Alu 1 293 -17 1434 112 68 0 chr2 58851775 58851981 -191835873 + AluSg/x SINE Alu 77 296 -14 2196 103 0 3 chr2 58852031 58852322 -191835532 - AluSc SINE Alu -19 290 1 2185 107 0 0 chr2 58852814 58853103 -191834751 + AluSc SINE Alu 1 289 -20 335 316 162 16 chr2 58853124 58853371 -191834483 + L1ME LINE L1 4733 5015 -1131 314 268 12 12 chr2 58853805 58853887 -191833967 + L1ME LINE L1 5509 5590 -531 291 299 19 0 chr2 58853979 58854086 -191833768 - L1MC4 LINE L1 0 8042 7934 2095 125 0 3 chr2 58854190 58854486 -191833368 + AluSx SINE Alu 1 295 -17 1581 172 55 7 chr2 58854613 58854886 -191832968 - AluJb SINE Alu -26 286 1 1329 128 0 5 chr2 58854947 58855134 -191832720 - AluSg/x SINE Alu -14 296 111 377 255 121 53 chr2 58855245 58855527 -191832327 + L2 LINE L2 2910 3210 -103 413 233 20 68 chr2 58855547 58855693 -191832161 + L2 LINE L2 3159 3297 -16 910 264 13 13 chr2 58855708 58855943 -191831911 - MIR SINE MIR -24 238 4 356 331 73 34 chr2 58856069 58856398 -191831456 - L2 LINE L2 -276 2996 2665 2281 108 0 0 chr2 58856599 58856894 -191830960 + AluSx SINE Alu 1 295 -17 2194 108 0 7 chr2 58857543 58857840 -191830014 + AluSq SINE Alu 3 297 -16 693 226 145 18 chr2 58857863 58857913 -191829941 - MIR SINE MIR -12 250 208 2887 13 0 0 chr2 58857913 58858223 -191829631 - AluYb8 SINE Alu -8 310 1 693 226 145 18 chr2 58858223 58858393 -191829461 - MIR SINE MIR -54 208 2 2169 84 37 7 chr2 58858775 58859073 -191828781 - AluSc SINE Alu 0 309 3 2274 55 79 0 chr2 58859081 58859371 -191828483 - AluSp SINE Alu 0 313 1 349 272 28 39 chr2 58860994 58861174 -191826680 + (CAGAGA)n Simple_repeat Simple_repeat 3 180 0 477 171 0 0 chr2 58861204 58861274 -191826580 + AluS SINE Alu 15 84 -228 255 330 16 71 chr2 58861367 58861549 -191826305 - MIR SINE MIR -71 191 20 364 200 14 0 chr2 58861796 58861866 -191825988 - MER58 DNA MER1_type 0 2420 2350 26 21 0 42 chr2 58861891 58861907 -191825947 + AT_rich Low_complexity Low_complexity 1 16 -30 2123 117 7 3 chr2 58861907 58862205 -191825649 + AluSq SINE Alu 1 299 -14 26 21 0 42 chr2 58862205 58862236 -191825618 + AT_rich Low_complexity Low_complexity 16 46 0 182 291 36 0 chr2 58862282 58862337 -191825517 + MIR3 SINE MIR 151 207 -1 241 118 0 0 chr2 58862642 58862676 -191825178 - L2 LINE L2 -16 3297 3264 214 204 0 41 chr2 58862795 58862844 -191825010 - L2 LINE L2 -5 3308 3262 2306 129 53 76 chr2 58863891 58863946 -191823908 - L1MB8 LINE L1 -11 6167 6112 1863 173 0 0 chr2 58863946 58864230 -191823624 + AluJb SINE Alu 3 286 -26 2306 129 53 76 chr2 58864230 58864662 -191823192 - L1MB8 LINE L1 -66 6112 5691 1791 175 93 16 chr2 58864658 58865195 -191822659 - L1MB8 LINE L1 -720 5464 4877 * 297 20 60 0 chr2 58865294 58865344 -191822510 + (TTG)n Simple_repeat Simple_repeat 2 54 0 1850 150 0 4 chr2 58865344 58865624 -191822230 - AluSx SINE Alu -33 279 1 182 356 0 0 chr2 58865661 58865720 -191822134 - L2 LINE L2 -682 2632 2574 1971 164 13 0 chr2 58865726 58866031 -191821823 + AluJo SINE Alu 1 309 -3 353 155 0 0 chr2 58866616 58866674 -191821180 - AluSc SINE Alu -8 291 234 1240 88 33 65 chr2 58866774 58866903 -191820951 - AluSc SINE Alu -101 208 87 2493 70 0 0 chr2 58866903 58867204 -191820650 - AluY SINE Alu -10 301 1 1240 88 33 65 chr2 58867204 58867289 -191820565 - AluSc SINE Alu -222 87 1 183 286 0 0 chr2 58867291 58867333 -191820521 + L3 LINE CR1 1527 1568 -9 2214 156 33 0 chr2 58868084 58868417 -191819437 - MER2 DNA MER2_type 0 344 1 1724 158 7 30 chr2 58868592 58868890 -191818964 - AluJo SINE Alu -18 294 4 494 287 138 6 chr2 58869285 58869459 -191818395 + L2 LINE L2 3117 3313 0 1877 96 103 0 chr2 58869665 58869926 -191817928 - AluSg SINE Alu -22 288 1 2413 94 0 0 chr2 58870505 58870804 -191817050 - AluSg SINE Alu -11 299 1 254 266 266 8 chr2 58870847 58870975 -191816879 - L2 LINE L2 -248 3024 2864 1794 171 13 7 chr2 58871207 58871512 -191816342 - AluJo SINE Alu -5 307 1 2031 116 14 10 chr2 58871665 58871958 -191815896 - AluSx SINE Alu -18 294 1 2380 87 0 6 chr2 58871966 58872278 -191815576 - AluY SINE Alu -1 310 1 2313 101 3 0 chr2 58872278 58872576 -191815278 - AluSp SINE Alu -14 299 1 597 254 78 74 chr2 58872600 58872716 -191815138 - MIR SINE MIR -3 259 145 2081 134 0 0 chr2 58872716 58873014 -191814840 - AluSx SINE Alu -14 298 1 597 254 78 74 chr2 58873014 58873141 -191814713 - MIR SINE MIR -117 145 15 185 211 0 96 chr2 58873536 58873588 -191814266 + MIR3 SINE MIR 147 193 -15 210 321 114 80 chr2 58873829 58874190 -191813664 - L2 LINE L2 -38 3234 2862 26 93 0 0 chr2 58874688 58874763 -191813091 + AT_rich Low_complexity Low_complexity 1 75 0 343 273 23 23 chr2 58875034 58875122 -191812732 + MIR SINE MIR 20 107 -155 981 261 7 81 chr2 58875369 58875775 -191812079 - MLT1J LTR MaLR -42 469 94 341 319 22 15 chr2 58875697 58875832 -191812022 - LTR67 LTR ERVL -383 174 39 * 222 315 109 0 chr2 58875988 58876080 -191811774 + MIR SINE MIR 160 261 -1 2403 45 3 11 chr2 58876097 58876406 -191811448 + AluY SINE Alu 1 307 0 216 0 0 0 chr2 58876516 58876540 -191811314 + (T)n Simple_repeat Simple_repeat 1 24 0 2289 106 0 13 chr2 58876690 58877001 -191810853 - AluSx SINE Alu -4 308 2 2200 118 0 0 chr2 58877436 58877732 -191810122 - AluSx SINE Alu -14 298 3 2387 97 7 0 chr2 58878026 58878336 -191809518 - AluSx SINE Alu 0 312 1 964 166 155 0 chr2 58878387 58878568 -191809286 + MER3 DNA MER1_type 1 209 0 827 214 21 0 chr2 58878594 58878766 -191809088 - AluJo SINE Alu 0 308 134 609 222 60 0 chr2 58878889 58879006 -191808848 - AluJo SINE Alu -187 125 2 1202 185 21 84 chr2 58879049 58879335 -191808519 - AluJo SINE Alu -44 268 1 967 161 59 73 chr2 58879526 58879692 -191808162 - L1MDa LINE L1 -4284 2256 2094 1971 161 3 0 chr2 58879692 58880002 -191807852 - AluSx SINE Alu -1 311 1 967 161 59 73 chr2 58880002 58880108 -191807746 - L1MDa LINE L1 -4446 2094 1988 1288 157 0 5 chr2 58880285 58880489 -191807365 + AluSx SINE Alu 2 204 -108 258 138 62 46 chr2 58880497 58880562 -191807292 + L1MB7 LINE L1 5324 5389 -2419 2332 85 7 0 chr2 58880562 58880855 -191806999 + AluY SINE Alu 2 296 -15 271 163 23 23 chr2 58880856 58880942 -191806912 + L1MB7 LINE L1 6099 6184 0 196 188 104 42 chr2 58881767 58881815 -191806039 + L2 LINE L2 3218 3268 -4 1750 120 54 0 chr2 58882457 58882716 -191805138 - AluSx SINE Alu -7 305 33 225 0 0 0 chr2 58882992 58883017 -191804837 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 227 260 183 19 chr2 58883130 58883234 -191804620 + L2 LINE L2 2935 3055 -258 201 349 134 13 chr2 58883347 58883496 -191804358 + MIR SINE MIR 87 253 -9 359 215 196 0 chr2 58883603 58883710 -191804144 + MIR SINE MIR 125 252 -10 197 250 0 0 chr2 58883676 58883716 -191804138 + L2 LINE L2 3264 3303 -10 * 2462 78 0 0 chr2 58883819 58884125 -191803729 + AluY SINE Alu 1 306 -5 2241 112 7 0 chr2 58884246 58884542 -191803312 + AluSx SINE Alu 1 298 -14 263 364 0 10 chr2 58885007 58885106 -191802748 + MIR SINE MIR 19 116 -146 399 275 106 0 chr2 58885153 58885295 -191802559 + MIR SINE MIR 101 257 -5 21 0 0 0 chr2 58885317 58885338 -191802516 + AT_rich Low_complexity Low_complexity 1 21 0 2354 89 0 0 chr2 58885404 58885697 -191802157 + AluSp SINE Alu 1 293 -20 1957 160 0 3 chr2 58885766 58886072 -191801782 + AluSx SINE Alu 1 305 -7 181 306 0 0 chr2 58886640 58886689 -191801165 + MER5B DNA MER1_type 1 49 -129 2491 57 27 0 chr2 58886691 58886991 -191800863 - AluY SINE Alu -3 308 1 338 355 7 21 chr2 58886992 58887133 -191800721 - MER5B DNA MER1_type -34 144 6 24 0 0 0 chr2 58887414 58887438 -191800416 + AT_rich Low_complexity Low_complexity 1 24 0 1679 173 17 17 chr2 58887445 58887745 -191800109 - AluJo SINE Alu -12 300 1 303 286 27 0 chr2 58887766 58887878 -191799976 - L1MA10 LINE L1 -4 6330 6216 810 201 0 30 chr2 58887881 58888050 -191799804 + FRAM SINE Alu 1 164 -12 439 204 38 53 chr2 58888050 58888182 -191799672 - L1ME1 LINE L1 -110 5990 5861 247 265 91 0 chr2 58888614 58888719 -191799135 - L1ME1 LINE L1 -679 5417 5300 241 153 271 0 chr2 58888755 58888814 -191799040 + MER91C DNA MER1_type 34 108 -32 252 334 35 32 chr2 58889334 58889648 -191798206 - L1ME1 LINE L1 -1367 4713 4399 711 260 31 24 chr2 58889679 58889967 -191797887 - L1ME1 LINE L1 -4079 2182 1893 674 193 0 0 chr2 58889993 58890102 -191797752 - FLAM_C SINE Alu -19 124 16 801 279 44 25 chr2 58890106 58890425 -191797429 - L1ME1 LINE L1 -4364 1897 1573 2225 79 0 36 chr2 58890436 58890740 -191797114 - AluY SINE Alu -18 293 1 852 267 161 77 chr2 58890751 58891362 -191796492 - L1ME1 LINE L1 -4712 1368 810 1502 90 0 25 chr2 58891362 58891563 -191796291 + AluSg/x SINE Alu 103 298 -12 852 267 161 77 chr2 58891563 58891745 -191796109 - L1ME1 LINE L1 -5270 810 556 2171 128 3 0 chr2 58891745 58892049 -191795805 - AluSg SINE Alu -5 305 1 852 267 161 77 chr2 58892049 58892092 -191795762 - L1ME1 LINE L1 -5524 556 518 2191 92 23 16 chr2 58893049 58893354 -191794500 + AluY SINE Alu 1 307 -4 212 270 90 90 chr2 58893599 58893777 -191794077 + MIR3 SINE MIR 23 200 -8 25 0 0 0 chr2 58894307 58894332 -191793522 + AT_rich Low_complexity Low_complexity 1 25 0 1209 175 0 5 chr2 58894332 58894538 -191793316 - AluJb SINE Alu -23 289 85 1933 162 3 3 chr2 58895188 58895491 -191792363 + AluJo SINE Alu 1 303 -9 281 202 112 22 chr2 58895710 58895799 -191792055 - MER102b DNA MER1_type -22 319 223 485 252 29 67 chr2 58895896 58896106 -191791748 - L1ME3A LINE L1 -7 6163 5962 1901 162 17 0 chr2 58896185 58896487 -191791367 - AluJb SINE Alu -5 307 1 213 39 0 0 chr2 58896536 58896562 -191791292 + (T)n Simple_repeat Simple_repeat 1 26 0 695 235 28 17 chr2 58896562 58896741 -191791113 - L1MC5 LINE L1 -465 7496 7316 2336 84 10 0 chr2 58896765 58897064 -191790790 + AluSq SINE Alu 9 310 -3 1951 149 14 0 chr2 58897100 58897396 -191790458 - AluSx SINE Alu -12 300 1 262 233 48 39 chr2 58897397 58897500 -191790354 - MER102b DNA MER1_type -211 130 27 333 203 165 0 chr2 58898751 58898830 -191789024 + MER3 DNA MER1_type 118 209 0 788 129 0 40 chr2 58899084 58899208 -191788646 + FLAM_C SINE Alu 15 133 -10 2404 96 0 0 chr2 58899674 58899975 -191787879 - AluSg SINE Alu -9 301 1 346 319 53 0 chr2 58900323 58900436 -191787418 - L2 LINE L2 0 3313 3195 603 344 76 65 chr2 58900661 58900804 -191787050 + L3 LINE CR1 164 304 -1273 2175 114 10 0 chr2 58900804 58901102 -191786752 + AluSx SINE Alu 1 301 -11 603 344 76 65 chr2 58901102 58901618 -191786236 + L3 LINE CR1 304 830 -747 229 333 50 35 chr2 58901848 58901989 -191785865 - L2 LINE L2 -233 3039 2897 180 0 0 0 chr2 58902047 58902067 -191785787 + (T)n Simple_repeat Simple_repeat 1 20 0 6678 77 29 44 chr2 58902163 58903804 -191784050 - SVA Other Other -723 1381 1 2448 52 10 7 chr2 58904556 58904863 -191782991 - AluY SINE Alu -3 308 1 1717 112 52 4 chr2 58905289 58905582 -191782272 + AluSg SINE Alu 1 306 0 2028 124 3 13 chr2 58905655 58905954 -191781900 - AluSx SINE Alu -16 296 1 1956 166 101 3 chr2 58906404 58906742 -191781112 - MER93b LTR ERV1 0 373 3 2332 93 0 0 chr2 58906789 58907090 -191780764 + AluSx SINE Alu 1 301 -11 3266 65 19 0 chr2 58907249 58907680 -191780174 - L1PA10 LINE L1 -4 6164 5726 984 40 0 0 chr2 58907681 58907806 -191780048 + L1PA10 LINE L1 5594 5718 -450 2130 123 13 7 chr2 58907910 58908255 -191779599 - AluSq SINE Alu 0 348 2 2805 179 10 66 chr2 58908831 58909451 -191778403 + MER77 LTR ERV1 6 590 -15 279 79 0 0 chr2 58909492 58909530 -191778324 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 627 296 64 92 chr2 58909534 58909930 -191777924 - L2 LINE L2 -11 3261 2878 2130 100 18 0 chr2 58909930 58910211 -191777643 - AluSx SINE Alu -26 286 1 627 296 64 92 chr2 58910211 58910284 -191777570 - L2 LINE L2 -394 2878 2805 24 0 0 0 chr2 58910641 58910665 -191777189 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr2 58911053 58911076 -191776778 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1930 141 0 7 chr2 58911081 58911358 -191776496 - AluSx SINE Alu -37 275 1 337 348 125 45 chr2 58911526 58911672 -191776182 - L2 LINE L2 -5 3267 3134 2048 114 11 0 chr2 58911672 58911973 -191775881 + AluSx SINE Alu 1 304 0 337 348 125 45 chr2 58911973 58912112 -191775742 - L2 LINE L2 -138 3134 2958 307 323 168 24 chr2 58912202 58912667 -191775187 - L2 LINE L2 -339 2975 2444 2436 68 7 0 chr2 58912699 58912994 -191774860 - AluSq SINE Alu -16 297 1 2242 112 6 3 chr2 58913884 58914196 -191773658 - AluSq SINE Alu 0 313 1 517 100 30 40 chr2 58914360 58914460 -191773394 + L1MC4 LINE L1 7180 7278 -764 23 0 0 0 chr2 58914811 58914834 -191773020 + AT_rich Low_complexity Low_complexity 1 23 0 979 187 11 11 chr2 58915065 58915252 -191772602 + MER5A DNA MER1_type 2 188 -1 1871 119 0 34 chr2 58915520 58915789 -191772065 + AluSq SINE Alu 1 260 -53 473 233 39 39 chr2 58915795 58915924 -191771930 + MIR SINE MIR 53 181 -81 572 242 8 15 chr2 58916113 58916245 -191771609 + FRAM SINE Alu 1 131 -45 315 27 27 55 chr2 58916245 58916318 -191771536 + (TAAA)n Simple_repeat Simple_repeat 1 71 0 264 244 96 26 chr2 58916484 58916599 -191771255 - L1ME4a LINE L1 -30 6091 5969 480 322 44 68 chr2 58916646 58917012 -191770842 + L2 LINE L2 2916 3272 0 26 0 0 0 chr2 58917057 58917083 -191770771 + AT_rich Low_complexity Low_complexity 1 26 0 744 272 75 21 chr2 58917794 58918125 -191769729 - L1ME3A LINE L1 -7 6163 5815 865 209 4 28 chr2 58918138 58918392 -191769462 + L1MA7 LINE L1 6038 6285 -6 749 183 0 8 chr2 58918406 58918537 -191769317 - AluJo SINE Alu -178 134 5 360 234 13 0 chr2 58919156 58919233 -191768621 - MIR SINE MIR -107 155 78 221 271 141 0 chr2 58919241 58919326 -191768528 - MIR SINE MIR 0 262 166 216 264 63 66 chr2 58919503 58919632 -191768222 - MIR SINE MIR -63 145 39 1719 188 3 3 chr2 58921081 58921363 -191766491 + AluJb SINE Alu 1 282 -30 378 0 0 0 chr2 58921376 58921418 -191766436 + (CA)n Simple_repeat Simple_repeat 1 42 0 274 231 58 29 chr2 58921732 58921836 -191766018 - MLT1L LTR MaLR -24 591 485 295 191 16 0 chr2 58921921 58921984 -191765870 - MLT1F LTR MaLR 0 567 504 2177 130 0 0 chr2 58921984 58922277 -191765577 - AluSx SINE Alu -19 293 1 2078 113 3 3 chr2 58922289 58922620 -191765234 - AluSx SINE Alu 0 331 1 826 182 6 6 chr2 58922627 58922786 -191765068 - FRAM SINE Alu -17 159 1 1800 163 0 28 chr2 58922803 58923122 -191764732 + AluJb SINE Alu 1 310 -2 1286 230 137 27 chr2 58923143 58923551 -191764303 - MLT1F LTR MaLR -89 453 1 253 230 0 58 chr2 58923698 58923785 -191764069 - MLT1L LTR MaLR -415 200 119 2398 99 0 0 chr2 58924085 58924389 -191763465 - AluSg SINE Alu -6 304 1 23 33 0 0 chr2 58925093 58925123 -191762731 + AT_rich Low_complexity Low_complexity 1 30 0 684 164 0 69 chr2 58926633 58926770 -191761084 - L1M4 LINE L1 -2319 3827 3701 2147 147 0 0 chr2 58926770 58927082 -191760772 - AluSx SINE Alu 0 312 1 684 164 0 69 chr2 58927082 58927103 -191760751 - L1M4 LINE L1 -2445 3701 3680 258 105 0 0 chr2 58927245 58927283 -191760571 + (TC)n Simple_repeat Simple_repeat 1 38 0 551 211 0 0 chr2 58927283 58927392 -191760462 - AluJ SINE Alu -12 300 192 984 134 0 0 chr2 58927392 58927534 -191760320 - AluJ SINE Alu -170 142 1 228 204 61 0 chr2 58927603 58927652 -191760202 - L2 LINE L2 -18 3295 3244 551 254 159 18 chr2 58927670 58927890 -191759964 + MIR SINE MIR 12 262 0 444 317 22 22 chr2 58927913 58928096 -191759758 - MIR SINE MIR -57 205 23 2525 80 3 0 chr2 58928298 58928610 -191759244 - AluSp SINE Alu 0 313 1 2137 109 0 0 chr2 58930309 58930621 -191757233 - AluSx SINE Alu 0 312 1 414 0 0 0 chr2 58932570 58932616 -191755238 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 41010 36 21 2 chr2 58932616 58938633 -191749221 - L1PA3 LINE L1 -16 6139 1 186 280 107 40 chr2 58938713 58938788 -191749066 + MIR3 SINE MIR 87 166 -42 2101 121 0 7 chr2 58938810 58939099 -191748755 - AluSx SINE Alu -5 307 21 305 319 115 85 chr2 58939789 58940074 -191747780 + L2 LINE L2 1679 1954 -1360 1979 137 62 14 chr2 58940074 58940432 -191747422 - THE1C LTR MaLR 0 375 1 305 319 115 85 chr2 58940432 58940921 -191746933 + L2 LINE L2 1954 2476 -838 22 35 0 0 chr2 58941236 58941265 -191746589 + AT_rich Low_complexity Low_complexity 1 29 0 287 281 50 29 chr2 58941269 58941408 -191746446 - L1ME3A LINE L1 -23 6216 6075 2199 79 18 4 chr2 58941650 58941929 -191745925 + AluSq SINE Alu 11 293 -20 599 218 8 8 chr2 58942015 58942139 -191745715 + FLAM_A SINE Alu 1 124 -9 895 238 38 90 chr2 58942147 58942694 -191745160 - L1ME3A LINE L1 -387 5844 5326 6527 127 30 36 chr2 58942711 58943892 -191743962 + Tigger1 DNA MER2_type 2 1175 -1243 5579 120 35 15 chr2 58943892 58944561 -191743293 + L1PA11 LINE L1 4376 5030 -1144 2421 80 0 6 chr2 58944561 58944874 -191742980 + AluY SINE Alu 1 311 0 5579 120 35 15 chr2 58944874 58945139 -191742715 + L1PA11 LINE L1 5030 5288 -886 2227 116 0 0 chr2 58945139 58945446 -191742408 + AluSx SINE Alu 1 307 0 5579 120 35 15 chr2 58945446 58946268 -191741586 + L1PA11 LINE L1 5288 6174 0 922 229 5 0 chr2 58946281 58946473 -191741381 + MLT1A1 LTR MaLR 51 243 -122 5099 114 29 41 chr2 58946495 58947038 -191740816 + Tigger1 DNA MER2_type 1527 2056 -362 1795 173 3 19 chr2 58947038 58947345 -191740509 - AluJo SINE Alu -10 302 1 5099 114 29 41 chr2 58947345 58947704 -191740150 + Tigger1 DNA MER2_type 2056 2418 0 382 292 83 0 chr2 58947705 58947873 -191739981 - L1ME3A LINE L1 -904 5311 5130 2340 244 65 52 chr2 58947900 58948204 -191739650 - L1ME3A LINE L1 -1145 5070 4772 1821 190 43 35 chr2 58948204 58948667 -191739187 + MLT1C LTR MaLR 1 467 0 2340 244 65 52 chr2 58948667 58949632 -191738222 - L1ME3A LINE L1 -1443 4772 3784 1108 208 63 33 chr2 58949635 58949827 -191738027 - MLT2B1 LTR ERVL -8 507 322 2559 49 7 0 chr2 58949827 58950134 -191737720 + AluY SINE Alu 1 309 -2 1108 208 63 33 chr2 58950134 58950389 -191737465 - MLT2B1 LTR ERVL -193 322 1 2256 242 69 76 chr2 58950389 58951519 -191736335 - L1ME3A LINE L1 -2426 3789 2653 2236 125 0 0 chr2 58951519 58951816 -191736038 - AluSx SINE Alu -15 297 1 2256 242 69 76 chr2 58951816 58952033 -191735821 - L1ME3A LINE L1 -3562 2653 2449 2026 136 0 4 chr2 58952033 58952337 -191735517 - AluSq SINE Alu 0 308 6 2256 242 69 76 chr2 58952337 58952464 -191735390 - L1ME3A LINE L1 -3766 2449 2323 403 246 120 64 chr2 58952483 58952841 -191735013 - L1MEc LINE L1 -3959 2256 1918 305 307 168 29 chr2 58953127 58953371 -191734483 - L1MEc LINE L1 -4862 1343 1066 2480 136 26 23 chr2 58953428 58953855 -191733999 - MSTA LTR MaLR 0 428 1 2364 108 0 0 chr2 58953860 58954166 -191733688 - AluSg SINE Alu -4 306 1 269 174 29 14 chr2 58954172 58954241 -191733613 - L1MC1 LINE L1 0 6333 6264 1941 121 4 0 chr2 58954285 58954550 -191733304 - AluSx SINE Alu -19 293 28 371 298 66 33 chr2 58954676 58954827 -191733027 + L2 LINE L2 3158 3313 0 998 218 42 90 chr2 58955353 58955451 -191732403 - MLT1E2 LTR MaLR 0 626 525 186 43 0 0 chr2 58955451 58955474 -191732380 + (GCATG)n Simple_repeat Simple_repeat 5 27 0 998 218 42 90 chr2 58955474 58955577 -191732277 - MLT1E2 LTR MaLR -101 525 419 2425 187 90 4 chr2 58955577 58956090 -191731764 + MER74A LTR ERVL 2 558 0 998 218 42 90 chr2 58956090 58956383 -191731471 - MLT1E2 LTR MaLR -207 419 56 397 0 0 0 chr2 58956541 58956585 -191731269 + (TTTA)n Simple_repeat Simple_repeat 1 172 0 516 216 137 0 chr2 58956585 58956687 -191731167 - FLAM_A SINE Alu -17 116 1 777 169 0 22 chr2 58958679 58958862 -191728992 + CT-rich Low_complexity Low_complexity 1 179 0 1675 165 7 7 chr2 58958863 58959136 -191728718 - AluJb SINE Alu -39 273 1 1356 180 36 62 chr2 58959295 58959601 -191728253 - AluJo SINE Alu -14 298 1 279 241 27 62 chr2 58959675 58959787 -191728067 - MIR SINE MIR -57 205 98 292 304 23 13 chr2 58960651 58960863 -191726991 + G-rich Low_complexity Low_complexity 1 214 0 17387 68 3 2 chr2 58960936 58963241 -191724613 - L1P LINE L1 -2156 3990 1683 18766 38 10 8 chr2 58963341 58966277 -191721577 + L1PA4 LINE L1 3219 6155 0 6171 161 33 11 chr2 58966350 58968479 -191719375 + L1MA9 LINE L1 4094 6277 -35 660 260 34 48 chr2 58969561 58969769 -191718085 + MIR SINE MIR 2 206 -56 652 146 36 44 chr2 58970022 58970159 -191717695 + FLAM_C SINE Alu 2 137 -6 747 204 25 20 chr2 58970355 58970551 -191717303 + AluJb SINE Alu 108 304 -8 275 254 32 0 chr2 58970551 58970614 -191717240 + L1P4 LINE L1 16 80 -7501 1427 57 0 0 chr2 58970620 58970795 -191717059 - AluY SINE Alu -7 304 130 13354 233 100 26 chr2 58970799 58973697 -191714157 + L1P4 LINE L1 86 2768 -4835 4526 121 22 49 chr2 58973697 58974407 -191713447 - LTR8 LTR ERV1 0 691 1 13354 233 100 26 chr2 58974407 58977877 -191709977 + L1P4 LINE L1 2768 6914 -689 212 381 21 10 chr2 58978818 58978915 -191708939 + L3 LINE CR1 1479 1576 -1 596 256 9 78 chr2 58979212 58979431 -191708423 - MER58C DNA MER1_type -10 205 2 902 291 45 28 chr2 58979432 58979561 -191708293 - L1MC/D LINE L1 -2022 5786 5661 2546 136 5 19 chr2 58979561 58979930 -191707924 - THE1B LTR MaLR 0 364 1 902 291 45 28 chr2 58979930 58980268 -191707586 - L1MC/D LINE L1 -2147 5661 5311 1162 257 66 6 chr2 58980910 58981229 -191706625 + MER46C DNA MER2_type 1 338 0 2003 200 67 19 chr2 58981405 58981870 -191705984 + MLT1F LTR MaLR 56 542 0 997 261 172 28 chr2 58982144 58982669 -191705185 - MLT1H LTR MaLR 0 541 1 330 340 68 0 chr2 58983279 58983426 -191704428 - MIR3 SINE MIR -4 204 48 385 260 189 10 chr2 58983526 58983722 -191704132 - MIR SINE MIR -25 237 7 826 209 4 7 chr2 58983996 58984264 -191703590 + CT-rich Low_complexity Low_complexity 1 267 0 957 119 0 0 chr2 58984264 58984390 -191703464 - AluSq SINE Alu -53 260 135 247 232 14 58 chr2 58984543 58984612 -191703242 - L2 LINE L2 0 3272 3207 380 253 68 48 chr2 58984884 58985030 -191702824 - MLT1J2 LTR MaLR -18 432 284 * 834 256 50 4 chr2 58985024 58985266 -191702588 - MLT1J1 LTR MaLR -191 255 3 243 0 0 0 chr2 58985285 58985312 -191702542 + (CA)n Simple_repeat Simple_repeat 1 27 0 319 309 132 26 chr2 58985463 58985615 -191702239 - MIR3 SINE MIR -3 205 38 6230 72 42 48 chr2 58986898 58988731 -191699123 - SVA Other Other -518 1386 9 2532 17 10 17 chr2 58989162 58989463 -191698391 - AluYb8 SINE Alu -19 299 1 2185 127 3 0 chr2 58989545 58989853 -191698001 + AluSp SINE Alu 3 311 -2 312 254 0 0 chr2 58990058 58990121 -191697733 + HAL1 LINE L1 806 868 -1639 509 182 297 7 chr2 58990151 58990299 -191697555 + HAL1 LINE L1 1557 1747 -760 45131 38 3 0 chr2 58990343 58996497 -191691357 + L1PA4 LINE L1 2 6166 0 370 274 96 63 chr2 58996497 58996800 -191691054 + HAL1 LINE L1 1793 2105 -402 296 158 29 70 chr2 58996835 58997059 -191690795 + (TA)n Simple_repeat Simple_repeat 1 214 0 296 200 21 143 chr2 58997238 58997378 -191690476 + HAL1 LINE L1 2375 2497 -10 24 0 0 0 chr2 58997392 58997416 -191690438 + AT_rich Low_complexity Low_complexity 1 24 0 230 191 0 0 chr2 58998497 58998539 -191689315 - L2 LINE L2 -1 3312 3271 1077 339 61 10 chr2 58998824 58999400 -191688454 - L2 LINE L2 -639 2675 2071 889 126 0 0 chr2 58999400 58999519 -191688335 + AluSq/x SINE Alu 1 119 -193 575 234 75 114 chr2 58999545 59000070 -191687784 - MER34 LTR ERV1 -57 485 1 420 116 35 47 chr2 59000102 59000188 -191687666 - L2 LINE L2 -4 3309 3225 377 331 27 62 chr2 59000215 59000553 -191687301 - L2 LINE L2 -1378 1936 1611 2139 117 0 13 chr2 59000555 59000871 -191686983 + AluSx SINE Alu 1 312 0 333 118 0 0 chr2 59001348 59001399 -191686455 + (CATA)n Simple_repeat Simple_repeat 4 54 0 259 308 19 29 chr2 59001905 59001922 -191685932 + MIR SINE MIR 53 69 -193 2233 104 10 0 chr2 59001922 59002219 -191685635 - AluSg SINE Alu -10 300 1 259 308 19 29 chr2 59002219 59002305 -191685549 + MIR SINE MIR 69 155 -107 319 267 23 5 chr2 59002308 59002454 -191685400 - MIR SINE MIR -44 218 2 1013 123 31 6 chr2 59002536 59002698 -191685156 + L1MB3 LINE L1 6014 6179 -4 26 30 0 0 chr2 59003194 59003227 -191684627 + AT_rich Low_complexity Low_complexity 1 33 0 33 56 0 0 chr2 59003279 59003333 -191684521 + AT_rich Low_complexity Low_complexity 1 54 0 257 319 151 17 chr2 59004243 59004362 -191683492 - L2 LINE L2 -6 3266 3132 2387 211 13 32 chr2 59004396 59004926 -191682928 - MER44D DNA MER2_type -30 575 1 189 0 0 0 chr2 59004932 59004953 -191682901 + (TG)n Simple_repeat Simple_repeat 2 22 0 222 286 204 25 chr2 59005054 59005299 -191682555 - L2 LINE L2 -389 2925 2637 1021 134 0 0 chr2 59005409 59005551 -191682303 - AluSq/x SINE Alu -170 142 1 2221 92 0 13 chr2 59005553 59005856 -191681998 - AluY SINE Alu -12 299 1 180 0 0 0 chr2 59006673 59006693 -191681161 + (TTG)n Simple_repeat Simple_repeat 2 21 0 582 217 39 89 chr2 59007430 59007610 -191680244 + L2 LINE L2 3142 3312 -1 1549 204 53 53 chr2 59008245 59008693 -191679161 - MLT1C LTR MaLR -8 459 5 23 33 0 0 chr2 59010333 59010363 -191677491 + AT_rich Low_complexity Low_complexity 1 30 0 430 319 138 13 chr2 59010363 59010595 -191677259 - MIR SINE MIR 0 262 2 22 35 0 0 chr2 59011802 59011831 -191676023 + AT_rich Low_complexity Low_complexity 1 29 0 1891 107 8 0 chr2 59012375 59012627 -191675227 + AluSq SINE Alu 45 298 -15 1060 193 0 6 chr2 59012890 59013056 -191674798 + FAM SINE Alu 2 166 -9 2450 78 0 0 chr2 59013087 59013381 -191674473 + AluSq SINE Alu 1 294 -19 2313 104 0 0 chr2 59013385 59013682 -191674172 + AluSx SINE Alu 5 301 -11 1224 127 28 0 chr2 59014273 59014454 -191673400 - AluSc SINE Alu 0 309 124 2197 102 3 16 chr2 59014454 59014767 -191673087 - AluY SINE Alu -2 309 1 567 301 108 60 chr2 59015068 59015144 -191672710 - L2 LINE L2 -20 3293 3222 2310 105 0 0 chr2 59015144 59015448 -191672406 + AluSx SINE Alu 1 304 -8 567 301 108 60 chr2 59015448 59015506 -191672348 - L2 LINE L2 -91 3222 3168 2572 169 37 94 chr2 59015506 59015680 -191672174 + MER6A DNA MER2_type 1 183 -682 2308 95 0 16 chr2 59015680 59015984 -191671870 + AluSx SINE Alu 1 299 -13 2572 169 37 94 chr2 59015984 59016450 -191671404 + MER6A DNA MER2_type 183 605 0 567 301 108 60 chr2 59016450 59016649 -191671205 - L2 LINE L2 -145 3168 2943 2202 91 0 53 chr2 59016837 59017156 -191670698 - AluSx SINE Alu -10 302 1 197 278 72 31 chr2 59017226 59017323 -191670531 - L2 LINE L2 -665 2649 2549 735 143 180 19 chr2 59017684 59017845 -191670009 - MER53 DNA DNA -1 188 2 244 65 0 0 chr2 59017880 59017911 -191669943 - MER53 DNA DNA -158 31 1 2363 76 3 0 chr2 59018180 59018469 -191669385 - AluSc SINE Alu -19 290 1 1679 149 24 28 chr2 59018521 59018810 -191669044 + AluJb SINE Alu 1 288 -24 1386 130 4 30 chr2 59019655 59019885 -191667969 - AluJo SINE Alu -2 310 87 1819 138 7 41 chr2 59020141 59020432 -191667422 - AluJo SINE Alu -21 291 11 2165 118 7 0 chr2 59020480 59020776 -191667078 + AluSq SINE Alu 1 298 -15 1451 169 165 0 chr2 59020780 59021034 -191666820 + AluJb SINE Alu 3 298 -4 772 270 60 16 chr2 59021209 59021457 -191666397 - HERV16 LTR ERVL -3983 1013 755 539 362 61 0 chr2 59021707 59022000 -191665854 - HERV16 LTR ERVL -4567 429 119 1914 242 31 24 chr2 59022062 59022517 -191665337 - LTR16B LTR ERVL -2 462 5 767 202 0 0 chr2 59022536 59022655 -191665199 + FLAM_C SINE Alu 2 120 -23 255 217 66 96 chr2 59022832 59022998 -191664856 + L1 LINE L1 4898 5058 -1088 315 119 0 0 chr2 59023198 59023240 -191664614 + Alu SINE Alu 1 42 -260 2096 109 0 7 chr2 59023303 59023634 -191664220 + AluSc SINE Alu 2 330 0 231 125 0 0 chr2 59023768 59023808 -191664046 + (CA)n Simple_repeat Simple_repeat 1 40 0 319 251 151 84 chr2 59023835 59024014 -191663840 + HAL1 LINE L1 435 625 -1882 225 364 111 20 chr2 59024177 59024375 -191663479 - L2 LINE L2 -473 2841 2626 359 236 82 60 chr2 59024467 59024649 -191663205 - L2 LINE L2 -1 3312 3127 634 325 121 21 chr2 59024751 59025182 -191662672 + MLT1K LTR MaLR 1 474 -2 249 346 39 26 chr2 59025242 59025395 -191662459 - L2 LINE L2 -243 3070 2916 463 183 37 0 chr2 59025532 59025614 -191662240 + MER20 DNA MER1_type 135 219 0 246 257 169 7 chr2 59025615 59025751 -191662103 + L1MC/D LINE L1 5634 5791 -2017 243 278 0 0 chr2 59025756 59025810 -191662044 - LTR27 LTR ERV1 0 636 583 3964 169 128 31 chr2 59025867 59026739 -191661115 - LTR28 LTR ERV1 -63 957 1 2040 114 48 0 chr2 59026811 59027100 -191660754 + AluSq SINE Alu 3 305 -8 791 153 0 24 chr2 59027123 59027247 -191660607 + FLAM_C SINE Alu 11 131 -12 778 137 26 0 chr2 59027273 59027388 -191660466 - Tigger3(Golem) DNA MER2_type -1 3028 2911 519 101 0 0 chr2 59027388 59027457 -191660397 - MER1B DNA MER1_type 0 329 261 1163 183 0 0 chr2 59027459 59027656 -191660198 - MER1B DNA MER1_type -77 220 24 565 190 246 0 chr2 59027709 59027851 -191660003 - MER45A DNA AcHobo -1 177 1 2229 95 7 7 chr2 59027964 59028268 -191659586 - AluSx SINE Alu -8 304 1 454 314 65 7 chr2 59028462 59028615 -191659239 + MER115 DNA AcHobo 100 261 -432 793 201 38 11 chr2 59029102 59029286 -191658568 + AluSc SINE Alu 112 300 -9 202 262 0 0 chr2 59030527 59030569 -191657285 + (CCG)n Simple_repeat Simple_repeat 2 43 0 24 32 0 0 chr2 59031796 59031827 -191656027 + AT_rich Low_complexity Low_complexity 1 31 0 2055 89 30 23 chr2 59032040 59032342 -191655512 - AluSc SINE Alu -5 304 1 336 281 104 79 chr2 59033254 59033582 -191654272 - L1MC4a LINE L1 -1751 6057 5722 1024 187 9 61 chr2 59034805 59034959 -191652895 - AluJo SINE Alu -23 289 147 2375 74 0 7 chr2 59034959 59035258 -191652596 - AluY SINE Alu -14 297 1 1024 187 9 61 chr2 59035258 59035317 -191652537 - AluJo SINE Alu -165 147 87 606 170 28 9 chr2 59035365 59035471 -191652383 - FLAM_C SINE Alu -21 122 15 705 165 0 0 chr2 59035676 59035779 -191652075 - FLAM_A SINE Alu -18 124 22 1555 183 3 20 chr2 59035891 59036186 -191651668 + AluJo SINE Alu 4 293 -19 971 158 82 0 chr2 59036595 59036753 -191651101 + FAM SINE Alu 1 171 -4 1801 167 21 0 chr2 59036764 59037052 -191650802 + AluJb SINE Alu 6 299 -13 281 280 0 0 chr2 59037228 59037303 -191650551 - MIR SINE MIR -120 142 68 248 296 119 53 chr2 59037537 59037855 -191649999 - L2 LINE L2 -554 2760 2422 22 0 0 0 chr2 59037911 59037933 -191649921 + AT_rich Low_complexity Low_complexity 1 22 0 340 340 58 16 chr2 59037982 59038170 -191649684 - L1MC4a LINE L1 -1736 6072 5877 1667 188 47 0 chr2 59038224 59038522 -191649332 - AluJb SINE Alu 0 312 1 710 135 9 27 chr2 59038625 59038736 -191649118 + FAM SINE Alu 24 132 -53 1473 197 51 7 chr2 59038949 59039223 -191648631 - AluJo SINE Alu -16 286 1 506 294 120 30 chr2 59039242 59039541 -191648313 - L2 LINE L2 -561 2753 2428 2221 122 3 0 chr2 59039621 59039925 -191647929 + AluSx SINE Alu 1 305 -7 3087 207 56 27 chr2 59040122 59040784 -191647070 + MER21B LTR ERV1 153 833 -30 402 260 220 20 chr2 59040820 59041070 -191646784 + Charlie7 DNA MER1_type 298 597 -2015 2289 109 3 3 chr2 59041073 59041386 -191646468 - AluSq SINE Alu 0 313 1 715 194 0 24 chr2 59041391 59041515 -191646339 - FLAM_C SINE Alu -14 129 9 460 209 70 8 chr2 59041519 59041648 -191646206 + Charlie7 DNA MER1_type 587 723 -1889 23 68 0 0 chr2 59041694 59041738 -191646116 + AT_rich Low_complexity Low_complexity 1 44 0 2360 96 0 0 chr2 59041997 59042300 -191645554 - AluSc SINE Alu -6 303 1 1744 145 34 20 chr2 59042789 59043085 -191644769 + AluJb SINE Alu 1 300 -12 240 35 0 0 chr2 59043101 59043130 -191644724 + (TG)n Simple_repeat Simple_repeat 2 30 0 309 194 30 0 chr2 59044415 59044482 -191643372 - L1MC3 LINE L1 0 7785 7717 1990 130 14 0 chr2 59044675 59044967 -191642887 + AluSx SINE Alu 3 298 -14 2519 222 35 17 chr2 59045028 59045564 -191642290 - MER77 LTR ERV1 -6 599 54 2484 74 0 0 chr2 59046248 59046547 -191641307 + AluY SINE Alu 3 301 -10 875 235 5 52 chr2 59046548 59046761 -191641093 - MER77-int LTR ERV1 -64 4127 3925 180 0 0 0 chr2 59046762 59046782 -191641072 + (T)n Simple_repeat Simple_repeat 1 20 0 1450 135 62 4 chr2 59046907 59047151 -191640703 - AluSg SINE Alu -52 258 1 206 326 0 0 chr2 59047195 59047290 -191640564 + T-rich Low_complexity Low_complexity 1 95 0 2342 98 3 0 chr2 59047575 59047882 -191639972 - AluSp SINE Alu 0 313 6 295 258 129 16 chr2 59048411 59048535 -191639319 - MLT1J1 LTR MaLR -24 422 285 2229 119 0 6 chr2 59048565 59048876 -191638978 - AluSx SINE Alu -3 309 1 2080 127 0 7 chr2 59049796 59050096 -191637758 - AluSx SINE Alu -14 298 1 1522 119 28 44 chr2 59050164 59050206 -191637648 - L1MB4 LINE L1 -6 6174 6133 189 0 0 0 chr2 59050206 59050227 -191637627 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2109 99 3 24 chr2 59050227 59050381 -191637473 - AluSp SINE Alu -27 286 130 315 0 0 0 chr2 59050381 59050416 -191637438 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2349 71 0 0 chr2 59050416 59050699 -191637155 - AluY SINE Alu -28 283 1 2109 99 3 24 chr2 59050699 59050835 -191637019 - AluSp SINE Alu -181 132 1 1522 119 28 44 chr2 59050835 59051042 -191636812 - L1MB4 LINE L1 -45 6135 5928 2413 89 0 3 chr2 59051055 59051359 -191636495 - AluSq SINE Alu -10 303 1 3423 130 20 6 chr2 59051376 59051883 -191635971 + MER75 DNA T2_type 1 514 0 286 290 0 14 chr2 59052178 59052247 -191635607 + Charlie1 DNA MER1_type 3 70 -2691 * 836 228 57 37 chr2 59052246 59052544 -191635310 + Charlie1 DNA MER1_type 2343 2646 -115 820 172 31 0 chr2 59052562 59052690 -191635164 - FLAM_C SINE Alu -1 132 1 2164 114 10 3 chr2 59052713 59053011 -191634843 + AluSx SINE Alu 1 300 -12 2550 180 47 14 chr2 59053727 59054221 -191633633 - L1PB4 LINE L1 0 6156 5647 730 197 38 8 chr2 59054280 59054412 -191633442 - AluJo SINE Alu -175 137 2 186 268 14 14 chr2 59054669 59054740 -191633114 + MIR SINE MIR 183 253 -9 2072 108 14 3 chr2 59054863 59055158 -191632696 - AluSx SINE Alu -14 298 1 205 290 151 0 chr2 59055530 59055623 -191632231 - L3 LINE CR1 -703 874 768 257 274 150 65 chr2 59055731 59055884 -191631970 + MIR3 SINE MIR 43 208 0 1710 164 20 20 chr2 59056594 59056898 -191630956 + AluJb SINE Alu 1 304 -8 2320 99 3 0 chr2 59057678 59057990 -191629864 - AluSp SINE Alu 0 313 1 359 85 49 0 chr2 59058023 59058105 -191629749 + (TA)n Simple_repeat Simple_repeat 1 86 0 2327 81 0 3 chr2 59058106 59058402 -191629452 - AluY SINE Alu -16 295 1 2439 90 3 0 chr2 59059496 59059807 -191628047 - AluSp SINE Alu -1 312 1 2158 127 3 0 chr2 59060436 59060736 -191627118 - AluSx SINE Alu -11 301 1 7304 172 14 25 chr2 59061495 59062964 -191624890 - L1P LINE L1 -4683 1463 11 1484 186 0 4 chr2 59063013 59063260 -191624594 - AluJb SINE Alu -66 246 1 3977 104 108 5 chr2 59063261 59063888 -191623966 + L1PA15 LINE L1 5461 6152 -13 236 343 28 9 chr2 59065690 59065798 -191622056 - L2 LINE L2 -239 3033 2924 329 254 88 18 chr2 59065799 59065913 -191621941 + L2 LINE L2 1912 2033 -1281 1261 345 52 30 chr2 59065914 59066719 -191621135 + L2 LINE L2 2155 2977 -337 1094 279 34 22 chr2 59066986 59067401 -191620453 - LTR16A LTR ERVL -10 440 21 628 334 107 23 chr2 59067421 59067900 -191619954 - L2 LINE L2 -509 2805 2287 595 115 10 10 chr2 59069872 59069976 -191617878 + (TTTC)n Simple_repeat Simple_repeat 4 107 0 956 115 8 0 chr2 59069993 59070123 -191617731 - FRAM SINE Alu -32 144 14 1977 137 53 114 chr2 59070354 59070828 -191617026 - MER65A LTR ERV1 0 445 1 1458 183 99 0 chr2 59070847 59071120 -191616734 - AluJo SINE Alu -12 300 1 1344 245 48 3 chr2 59071122 59071477 -191616377 - MER65A-int LTR ERV1 0 4871 4501 646 159 0 9 chr2 59071481 59071588 -191616266 - MER65A-int LTR ERV1 -1161 3710 3605 268 150 0 55 chr2 59071612 59071736 -191616118 - MER65A-int LTR ERV1 -958 5373 5205 2553 209 77 76 chr2 59071743 59072260 -191615594 - MER65A-int LTR ERV1 -1124 4021 3506 1959 122 0 18 chr2 59072260 59072576 -191615278 + AluSx SINE Alu 1 311 0 2553 209 77 76 chr2 59072576 59073510 -191614344 - MER65A-int LTR ERV1 -1639 3506 2469 719 179 47 47 chr2 59073594 59073828 -191614026 - MER65A-int LTR ERV1 -2872 3726 3493 276 119 0 75 chr2 59074057 59074124 -191613730 - MER65A-int LTR ERV1 -3119 3479 3418 856 117 0 0 chr2 59074130 59074250 -191613604 + AluSg/x SINE Alu 173 292 -20 1374 177 63 91 chr2 59074251 59074897 -191612957 - MER65A-int LTR ERV1 -2598 2525 1574 1036 199 9 43 chr2 59074995 59075206 -191612648 - AluJo SINE Alu -24 288 85 7291 206 65 52 chr2 59075234 59076618 -191611236 - MER65A-int LTR ERV1 -2377 2494 1063 1930 159 0 10 chr2 59076618 59076920 -191610934 + AluJo SINE Alu 4 302 -10 7291 206 65 52 chr2 59076920 59077944 -191609910 - MER65A-int LTR ERV1 -3808 1063 54 2250 135 72 35 chr2 59077999 59078428 -191609426 - MER65A LTR ERV1 0 445 1 619 225 110 64 chr2 59078500 59078736 -191609118 + MIR SINE MIR 15 261 -1 2253 115 107 15 chr2 59079106 59079498 -191608356 - MSTA LTR MaLR 0 428 1 297 65 22 0 chr2 59079930 59079976 -191607878 + MADE1 DNA Mariner 34 80 0 1142 87 0 12 chr2 59080029 59080202 -191607652 - L1MA5 LINE L1 -2 6298 6128 390 289 29 20 chr2 59080243 59080447 -191607407 - L1ME4a LINE L1 -232 5889 5684 422 202 11 0 chr2 59080810 59080899 -191606955 + MLT1J1 LTR MaLR 1 90 -356 903 142 8 8 chr2 59081092 59081226 -191606628 - AluJb SINE Alu -177 135 2 21 0 0 0 chr2 59081226 59081247 -191606607 + AT_rich Low_complexity Low_complexity 1 21 0 306 50 0 0 chr2 59081778 59081818 -191606036 + (CAA)n Simple_repeat Simple_repeat 3 42 0 360 0 0 0 chr2 59081923 59081963 -191605891 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 1912 117 19 0 chr2 59081986 59082385 -191605469 + L1P LINE L1 5025 5429 -736 * 2080 184 0 0 chr2 59082379 59082776 -191605078 - L1 LINE L1 -1871 4275 3879 * 6384 89 4 1 chr2 59082773 59083759 -191604095 + L1PB1 LINE L1 5164 6151 0 4689 115 6 36 chr2 59083763 59084557 -191603297 + L1PA16 LINE L1 5388 6157 -9 4805 89 30 36 chr2 59084583 59085206 -191602648 + L1PA15 LINE L1 5413 6033 -132 2306 87 0 34 chr2 59085206 59085527 -191602327 + AluSx SINE Alu 1 310 -2 4805 89 30 36 chr2 59085527 59085657 -191602197 + L1PA15 LINE L1 6033 6162 -3 189 154 0 0 chr2 59085795 59085834 -191602020 + (TA)n Simple_repeat Simple_repeat 2 40 0 459 193 28 0 chr2 59085878 59085987 -191601867 - L1ME2 LINE L1 -27 6137 6026 1050 144 18 65 chr2 59086510 59086739 -191601115 + MER20 DNA MER1_type 2 219 0 190 156 311 0 chr2 59087671 59087716 -191600138 - L2 LINE L2 -14 3299 3241 550 257 9 0 chr2 59088563 59088676 -191599178 + MER81 DNA DNA 1 114 0 2374 96 0 3 chr2 59088869 59089182 -191598672 + AluSx SINE Alu 1 312 0 215 207 224 0 chr2 59092734 59092792 -191595062 - MER5B DNA MER1_type -1 177 107 2274 118 0 6 chr2 59093023 59093337 -191594517 + AluSx SINE Alu 1 312 0 1027 151 0 114 chr2 59093584 59093829 -191594025 - MER20 DNA MER1_type -1 218 2 263 246 118 36 chr2 59094176 59094286 -191593568 - LTR67 LTR ERVL -340 217 99 696 151 48 70 chr2 59095105 59095291 -191592563 - MER53 DNA DNA 0 189 8 216 0 0 0 chr2 59096801 59096825 -191591029 + (T)n Simple_repeat Simple_repeat 1 24 0 195 258 32 32 chr2 59097159 59097221 -191590633 + MIR3 SINE MIR 144 205 -3 256 310 114 72 chr2 59097772 59098310 -191589544 - L2 LINE L2 -29 3243 2699 225 339 77 23 chr2 59098416 59098546 -191589308 + MIR SINE MIR 72 208 -54 560 278 44 50 chr2 59098955 59099135 -191588719 - MIR SINE MIR -10 252 74 21 0 0 0 chr2 59099310 59099331 -191588523 + AT_rich Low_complexity Low_complexity 1 21 0 23458 50 10 0 chr2 59099653 59102730 -191585124 + L1P LINE L1 1 3107 -3039 595 307 92 28 chr2 59103007 59103333 -191584521 + L2 LINE L2 2442 2788 -526 286 300 70 97 chr2 59103437 59103575 -191584279 + L2 LINE L2 2870 3001 -271 2823 3 0 0 chr2 59103575 59103879 -191583975 - AluYa5 SINE Alu -7 304 1 286 300 70 97 chr2 59103879 59103967 -191583887 + L2 LINE L2 3001 3090 -182 239 313 167 13 chr2 59104306 59104456 -191583398 + L2 LINE L2 2920 3092 -180 404 281 98 37 chr2 59104456 59104620 -191583234 + MIR SINE MIR 19 192 -70 514 293 30 15 chr2 59104693 59104826 -191583028 + L2 LINE L2 3136 3270 -2 222 289 0 0 chr2 59105229 59105274 -191582580 + MER91 DNA MER1_type 152 196 0 3171 197 54 8 chr2 59105290 59106127 -191581727 - MER69 DNA AcHobo 0 2526 1652 2347 243 84 6 chr2 59106156 59106799 -191581055 - MER69 DNA AcHobo -533 693 1 567 272 175 18 chr2 59107247 59107589 -191580265 + LTR16C LTR ERVL 96 491 0 30 0 0 0 chr2 59108520 59108550 -191579304 + AT_rich Low_complexity Low_complexity 1 30 0 2103 170 72 8 chr2 59108851 59109251 -191578603 - MSTB LTR MaLR 0 426 1 1739 182 3 3 chr2 59110503 59110794 -191577060 - AluJb SINE Alu -19 293 3 284 303 87 0 chr2 59110797 59110930 -191576924 - MIR SINE MIR -21 187 37 1981 160 56 45 chr2 59111414 59111761 -191576093 + L1MB5 LINE L1 5716 6071 -103 1761 91 50 124 chr2 59111761 59112125 -191575729 - MER1B DNA MER1_type 0 337 1 1981 160 56 45 chr2 59112125 59112222 -191575632 + L1MB5 LINE L1 6071 6165 -9 180 0 0 0 chr2 59112359 59112379 -191575475 + (TA)n Simple_repeat Simple_repeat 2 21 0 25 0 0 0 chr2 59113149 59113174 -191574680 + AT_rich Low_complexity Low_complexity 1 25 0 271 338 0 0 chr2 59115276 59115353 -191572501 + L2 LINE L2 3150 3226 -46 569 267 112 22 chr2 59115414 59115646 -191572208 - L2 LINE L2 0 3313 3061 22 0 0 0 chr2 59115729 59115751 -191572103 + AT_rich Low_complexity Low_complexity 1 22 0 225 350 24 41 chr2 59115882 59116005 -191571849 + L2 LINE L2 3173 3293 -20 27 49 0 0 chr2 59116150 59116191 -191571663 + AT_rich Low_complexity Low_complexity 1 41 0 23 54 0 0 chr2 59116442 59116479 -191571375 + AT_rich Low_complexity Low_complexity 1 37 0 575 251 37 37 chr2 59117598 59117785 -191570069 + MIR SINE MIR 66 252 -10 279 0 0 0 chr2 59117812 59117843 -191570011 + (CAA)n Simple_repeat Simple_repeat 3 33 0 185 289 62 83 chr2 59118702 59118944 -191568910 - L2 LINE L2 -188 3084 2848 186 43 0 0 chr2 59119238 59119261 -191568593 + (CAA)n Simple_repeat Simple_repeat 2 24 0 286 242 15 15 chr2 59119387 59119453 -191568401 - L2 LINE L2 0 3272 3207 199 350 110 50 chr2 59119460 59119660 -191568194 + L2 LINE L2 3045 3256 -16 182 349 64 28 chr2 59119666 59119775 -191568079 - MIR SINE MIR -68 194 82 324 0 0 0 chr2 59120237 59120273 -191567581 + (CA)n Simple_repeat Simple_repeat 1 36 0 365 240 48 29 chr2 59121230 59121334 -191566520 - MIR SINE MIR -117 145 40 23 0 0 0 chr2 59121887 59121910 -191565944 + AT_rich Low_complexity Low_complexity 1 23 0 233 29 29 0 chr2 59122296 59122330 -191565524 + (TA)n Simple_repeat Simple_repeat 2 36 0 51 31 0 0 chr2 59122330 59122395 -191565459 + AT_rich Low_complexity Low_complexity 1 65 0 219 274 123 0 chr2 59122428 59122501 -191565353 + MIR SINE MIR 42 123 -85 279 0 0 0 chr2 59122506 59122537 -191565317 + (CA)n Simple_repeat Simple_repeat 2 32 0 417 295 70 50 chr2 59123193 59123393 -191564461 - MIR3 SINE MIR 0 208 5 * 455 263 158 0 chr2 59123388 59123540 -191564314 - MER5A DNA MER1_type -6 183 8 324 120 0 0 chr2 59123927 59123977 -191563877 + (TA)n Simple_repeat Simple_repeat 1 50 0 262 278 28 0 chr2 59125430 59125502 -191562352 + MIR SINE MIR 79 152 -110 207 0 0 0 chr2 59125829 59125852 -191562002 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 186 240 227 0 chr2 59125923 59125998 -191561856 + MIR SINE MIR 47 138 -124 734 251 90 59 chr2 59126130 59126453 -191561401 + L2 LINE L2 2977 3309 -4 467 259 28 0 chr2 59126568 59126676 -191561178 + L2 LINE L2 3201 3311 -2 196 380 141 16 chr2 59126693 59126814 -191561040 - L2 LINE L2 -12 3260 3125 447 237 90 19 chr2 59126875 59127089 -191560765 + MER5C DNA MER1_type 4 324 0 333 321 82 33 chr2 59127089 59127272 -191560582 - L2 LINE L2 -185 3087 2896 355 281 211 5 chr2 59128112 59128297 -191559557 - MIR SINE MIR -37 225 3 406 288 0 34 chr2 59131855 59131973 -191555881 + L2 LINE L2 3200 3313 0 352 160 146 139 chr2 59134230 59134374 -191553480 - MIR SINE MIR -70 192 48 2007 124 0 3 chr2 59135480 59135762 -191552092 - AluSg SINE Alu -9 301 21 1826 255 62 23 chr2 59136738 59137927 -191549927 + L1MEc LINE L1 1858 3044 -3171 912 133 0 0 chr2 59138094 59138245 -191549609 - L1PA14 LINE L1 0 6161 6011 383 347 108 0 chr2 59138246 59138413 -191549441 + L3 LINE CR1 1277 1461 -116 21 36 0 0 chr2 59140436 59140464 -191547390 + AT_rich Low_complexity Low_complexity 1 28 0 522 316 69 48 chr2 59140579 59140810 -191547044 + MIR SINE MIR 14 249 -13 2487 37 7 0 chr2 59142690 59142986 -191544868 - AluY SINE Alu -13 298 1 316 293 233 26 chr2 59143985 59144400 -191543454 + L2 LINE L2 2751 3264 -8 23 33 0 0 chr2 59144875 59144905 -191542949 + AT_rich Low_complexity Low_complexity 1 30 0 25 65 0 0 chr2 59145514 59145560 -191542294 + AT_rich Low_complexity Low_complexity 1 46 0 1270 231 207 47 chr2 59148837 59149348 -191538506 + MLT1E LTR MaLR 1 593 0 202 336 58 19 chr2 59150159 59150263 -191537591 - MIR SINE MIR -60 148 41 365 258 174 15 chr2 59150617 59150749 -191537105 + MER5A DNA MER1_type 36 188 -1 246 207 0 0 chr2 59150904 59150962 -191536892 + (TA)n Simple_repeat Simple_repeat 2 59 0 2683 153 19 56 chr2 59151521 59152056 -191535798 + MLT2B2 LTR ERVL 1 515 0 273 57 0 0 chr2 59152112 59152147 -191535707 + (T)n Simple_repeat Simple_repeat 1 35 0 2185 106 0 3 chr2 59152593 59152894 -191534960 - AluSp SINE Alu -13 300 1 2363 100 3 0 chr2 59153368 59153669 -191534185 - AluSx SINE Alu -10 302 1 205 316 26 0 chr2 59154381 59154457 -191533397 + (TATATG)n Simple_repeat Simple_repeat 1 78 0 2251 114 55 16 chr2 59155482 59155867 -191531987 + L1MA7 LINE L1 5892 6291 0 193 255 98 0 chr2 59158551 59158602 -191529252 - MER5A DNA MER1_type 0 189 134 21 95 0 0 chr2 59158635 59158698 -191529156 + AT_rich Low_complexity Low_complexity 1 63 0 733 158 14 14 chr2 59158717 59158856 -191528998 - MER5A DNA MER1_type -50 139 1 2082 131 0 0 chr2 59160874 59161171 -191526683 + AluSx SINE Alu 2 298 -14 458 258 178 26 chr2 59212439 59212951 -191474903 - L1ME4a LINE L1 -29 6092 5503 26 82 0 0 chr2 59213052 59213113 -191474741 + AT_rich Low_complexity Low_complexity 1 61 0 195 42 0 0 chr2 59213113 59213137 -191474717 + (GA)n Simple_repeat Simple_repeat 2 25 0 18521 75 1 5 chr2 59214295 59216946 -191470908 - L1P LINE L1 -2536 3610 971 22692 115 32 12 chr2 59217046 59220868 -191466986 - L1P LINE L1 -1317 4829 933 6743 31 14 1 chr2 59221316 59222167 -191465687 - L1PA4 LINE L1 0 6155 5294 1939 32 0 0 chr2 59222165 59222412 -191465442 + L1PA4 LINE L1 5050 5296 -850 * 437 289 214 12 chr2 59223012 59223185 -191464669 - L3 LINE CR1 -3 1574 1367 207 0 0 0 chr2 59223545 59223568 -191464286 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1978 135 0 0 chr2 59223574 59223848 -191464006 - AluSg SINE Alu -36 274 1 371 259 95 95 chr2 59224246 59224562 -191463292 + L2 LINE L2 2955 3270 -2 236 335 38 13 chr2 59225665 59225791 -191462063 - MIR SINE MIR -114 148 20 689 240 32 95 chr2 59226120 59226403 -191461451 - L2 LINE L2 -21 3292 3028 358 302 84 69 chr2 59227533 59227735 -191460119 + MIR3 SINE MIR 1 205 -3 228 331 24 57 chr2 59227911 59228035 -191459819 - L2 LINE L2 -1 3312 3193 227 292 117 33 chr2 59229383 59229503 -191458351 + MIR SINE MIR 47 176 -86 269 206 176 61 chr2 59230182 59230313 -191457541 - Charlie8 DNA MER1_type -2154 263 118 544 272 103 38 chr2 59230439 59230652 -191457202 + MIR SINE MIR 36 262 0 537 309 129 10 chr2 59230734 59230935 -191456919 - MIR SINE MIR -6 256 32 2186 122 98 34 chr2 59231031 59231417 -191456437 - LTR57 LTR ERVL 0 411 1 549 213 35 21 chr2 59232628 59232769 -191455085 + MIR SINE MIR 64 206 -56 273 303 26 13 chr2 59233479 59233555 -191454299 + MIR SINE MIR 3 79 -183 699 211 94 0 chr2 59233603 59233774 -191454080 - MER5A DNA MER1_type -1 188 2 188 355 55 27 chr2 59233966 59234076 -191453778 + MIR SINE MIR 31 143 -119 989 217 1 16 chr2 59234106 59234498 -191453356 + MLT1A2 LTR MaLR 23 374 0 1879 224 86 16 chr2 59235456 59236013 -191451841 + L1ME1 LINE L1 5554 6149 -17 522 298 152 23 chr2 59237495 59237804 -191450050 - L2 LINE L2 -15 3298 2950 591 336 17 20 chr2 59238054 59238402 -191449452 - ERVL LTR ERVL -387 5377 5031 931 154 39 6 chr2 59238536 59238718 -191449136 - ERVL LTR ERVL -1212 4552 4365 1508 170 61 7 chr2 59238821 59239115 -191448739 - ERVL LTR ERVL -1708 4056 3747 * 10185 161 21 12 chr2 59239114 59241233 -191446621 - ERVL LTR ERVL -2684 3080 874 8265 128 24 0 chr2 59241458 59242851 -191445003 - L1P3 LINE L1 -5027 1434 8 9393 231 52 19 chr2 59242859 59247659 -191440195 - L1 LINE L1 -1766 4966 310 1860 155 27 0 chr2 59247659 59247955 -191439899 + AluJb SINE Alu 1 304 -8 9393 231 52 19 chr2 59247955 59248082 -191439772 - L1 LINE L1 -6422 310 189 687 190 0 9 chr2 59248398 59248613 -191439241 - ERVL LTR ERVL -4889 875 574 459 236 14 69 chr2 59248628 59248772 -191439082 - L2 LINE L2 -1025 2289 2154 595 275 88 67 chr2 59248900 59249365 -191438489 - L2 LINE L2 -14 3299 2825 2177 130 85 35 chr2 59249760 59250184 -191437670 + MER65A LTR ERV1 1 445 0 7908 197 54 53 chr2 59250269 59252678 -191435176 + MER65A-int LTR ERV1 83 2494 -2377 427 159 122 47 chr2 59252688 59252795 -191435059 + MER65A-int LTR ERV1 3709 3823 -1113 323 98 144 0 chr2 59252863 59252931 -191434923 + MER65A-int LTR ERV1 4012 5392 -847 1707 247 65 7 chr2 59252943 59253376 -191434478 + MER65A-int LTR ERV1 3605 4062 -809 1648 251 12 21 chr2 59253371 59253850 -191434004 + MER65A-int LTR ERV1 4397 4871 0 * 2378 133 61 21 chr2 59253851 59254279 -191433575 + MER65A LTR ERV1 1 445 0 564 256 26 19 chr2 59254405 59254474 -191433380 + L2 LINE L2 3153 3220 -93 2172 129 0 3 chr2 59254474 59254768 -191433086 - AluSx SINE Alu -16 296 4 564 256 26 19 chr2 59254768 59254854 -191433000 + L2 LINE L2 3220 3309 -4 1776 156 17 17 chr2 59254975 59255264 -191432590 - AluJo SINE Alu -23 289 1 2272 112 0 0 chr2 59256132 59256428 -191431426 - AluSx SINE Alu -16 296 1 23 33 0 0 chr2 59256461 59256491 -191431363 + AT_rich Low_complexity Low_complexity 1 30 0 564 174 121 0 chr2 59256606 59256669 -191431185 - L1MA10 LINE L1 -10 6324 6270 207 0 0 0 chr2 59256669 59256692 -191431162 + (TA)n Simple_repeat Simple_repeat 1 23 0 564 174 121 0 chr2 59256692 59256760 -191431094 - L1MA10 LINE L1 -64 6270 6177 1931 158 0 0 chr2 59257767 59258059 -191429795 - AluSg SINE Alu -18 292 1 321 305 148 0 chr2 59258167 59258295 -191429559 - MIR SINE MIR -111 151 5 228 213 16 33 chr2 59258386 59258447 -191429407 - L2 LINE L2 -3 3269 3210 268 221 0 15 chr2 59258886 59258954 -191428900 - L1ME4a LINE L1 0 6121 6055 215 289 0 0 chr2 59261349 59261401 -191426453 + MIR SINE MIR 63 114 -148 270 200 9 86 chr2 59262726 59262831 -191425023 - HAL1b LINE L1 -490 858 762 295 286 13 0 chr2 59264840 59264917 -191422937 - L1ME3A LINE L1 -62 6108 6031 2147 88 20 3 chr2 59264961 59265255 -191422599 - AluY SINE Alu -12 299 1 13293 121 15 26 chr2 59265516 59268292 -191419562 + L1PA8A LINE L1 3357 6131 0 189 356 67 33 chr2 59268349 59268439 -191419415 - L2 LINE L2 -6 3266 3174 234 299 26 34 chr2 59268620 59268737 -191419117 + MIR SINE MIR 49 164 -98 404 293 15 91 chr2 59269237 59269435 -191418419 - MER5A DNA MER1_type 0 189 7 211 271 71 47 chr2 59269531 59269616 -191418238 - L2 LINE L2 0 3313 3227 22 0 0 0 chr2 59270234 59270256 -191417598 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 59270326 59270348 -191417506 + AT_rich Low_complexity Low_complexity 1 22 0 229 125 62 0 chr2 59270786 59270834 -191417020 + A-rich Low_complexity Low_complexity 2 52 0 1546 217 32 27 chr2 59270940 59271246 -191416608 - Zaphod DNA AcHobo -5 4026 3716 2375 72 3 0 chr2 59271246 59271550 -191416304 + AluY SINE Alu 1 305 -6 1546 217 32 27 chr2 59271550 59271653 -191416201 - Zaphod DNA AcHobo -315 3716 3615 2344 206 132 43 chr2 59271668 59272512 -191415342 - Zaphod DNA AcHobo -3041 990 72 435 306 65 18 chr2 59272926 59273096 -191414758 + MIR3 SINE MIR 26 203 -5 314 295 36 45 chr2 59273275 59273387 -191414467 - L2 LINE L2 -4 3268 3158 233 29 29 0 chr2 59273612 59273646 -191414208 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2098 42 0 4 chr2 59273646 59273906 -191413948 - L1PA4 LINE L1 -11 6144 5886 1014 181 0 6 chr2 59275327 59275498 -191412356 + AluJb SINE Alu 122 291 -21 257 320 186 13 chr2 59276896 59277052 -191410802 - MIR SINE MIR -48 214 32 292 313 104 8 chr2 59277179 59277313 -191410541 + MIR SINE MIR 7 153 -109 243 79 0 0 chr2 59277912 59277950 -191409904 + (T)n Simple_repeat Simple_repeat 1 38 0 2219 119 0 0 chr2 59278379 59278673 -191409181 + AluSx SINE Alu 1 294 -18 5607 157 35 6 chr2 59278674 59279678 -191408176 + L1P LINE L1 1 1033 -5113 792 201 118 0 chr2 59280492 59280661 -191407193 - MER5A DNA MER1_type 0 189 1 289 284 201 0 chr2 59282339 59282507 -191405347 + L2 LINE L2 2708 2909 -405 531 262 65 6 chr2 59282507 59282675 -191405179 - MER5B DNA MER1_type 0 178 1 2407 74 7 0 chr2 59283119 59283418 -191404436 - AluY SINE Alu -10 301 1 377 252 59 42 chr2 59284974 59285093 -191402761 - MER5A DNA MER1_type -7 182 62 297 0 0 0 chr2 59285257 59285290 -191402564 + (CA)n Simple_repeat Simple_repeat 1 33 0 260 331 52 66 chr2 59285397 59285533 -191402321 + L2 LINE L2 3138 3271 -1 342 296 141 36 chr2 59286637 59286857 -191400997 + MIR SINE MIR 20 262 0 2273 101 0 7 chr2 59288682 59288988 -191398866 - AluSx SINE Alu -8 304 1 331 272 93 37 chr2 59289313 59289475 -191398379 + MIR SINE MIR 58 228 -34 313 286 20 0 chr2 59289514 59289612 -191398242 - MIR SINE MIR -13 249 150 648 188 8 15 chr2 59290170 59290303 -191397551 - L1ME3A LINE L1 -1 6169 6038 1612 180 31 7 chr2 59290975 59291264 -191396590 + AluJo SINE Alu 1 296 -16 283 277 84 0 chr2 59292027 59292110 -191395744 + MIR SINE MIR 34 123 -85 367 291 82 51 chr2 59292152 59292310 -191395544 + MIR SINE MIR 87 249 -13 977 135 59 6 chr2 59293035 59293205 -191394649 + L1PA16 LINE L1 5970 6148 -18 3645 175 32 8 chr2 59293230 59293977 -191393877 + L1MD2 LINE L1 5595 6359 0 181 333 0 18 chr2 59293992 59294049 -191393805 - MIR3 SINE MIR -150 58 3 279 316 0 32 chr2 59294141 59294236 -191393618 + MIR SINE MIR 133 224 -38 23 33 0 0 chr2 59294863 59294893 -191392961 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 59294926 59294956 -191392898 + AT_rich Low_complexity Low_complexity 1 30 0 1065 177 16 0 chr2 59295594 59295780 -191392074 - MER5A DNA MER1_type 0 189 1 453 242 20 0 chr2 59296802 59296901 -191390953 + L2 LINE L2 3210 3310 -3 273 299 95 44 chr2 59298144 59298281 -191389573 + MER5B DNA MER1_type 1 144 -45 11600 193 34 19 chr2 59298288 59302286 -191385568 - L1MC1 LINE L1 -6 6607 2434 2400 77 0 7 chr2 59302286 59302583 -191385271 - AluSq SINE Alu -18 295 1 11600 193 34 19 chr2 59302583 59303538 -191384316 - L1MC1 LINE L1 -4179 2434 1495 1649 180 57 15 chr2 59303541 59303875 -191383979 - L1MC1 LINE L1 -6074 352 5 35 24 0 0 chr2 59303946 59303988 -191383866 + AT_rich Low_complexity Low_complexity 1 42 0 39 22 0 0 chr2 59305741 59305787 -191382067 + AT_rich Low_complexity Low_complexity 1 46 0 286 303 50 10 chr2 59306429 59306528 -191381326 - MIR3 SINE MIR -43 165 63 660 261 145 0 chr2 59306665 59306872 -191380982 + MIR SINE MIR 26 262 0 2996 123 10 12 chr2 59306974 59307460 -191380394 + L1MB2 LINE L1 5685 6169 -2 29 60 0 0 chr2 59308684 59308734 -191379120 + AT_rich Low_complexity Low_complexity 1 50 0 25 83 0 0 chr2 59310278 59310338 -191377516 + AT_rich Low_complexity Low_complexity 1 60 0 14778 49 3 0 chr2 59311402 59313926 -191373928 + L1PA5 LINE L1 3635 6154 0 205 306 139 9 chr2 59314206 59314314 -191373540 - MIR SINE MIR -69 139 18 278 254 51 25 chr2 59314597 59314715 -191373139 - L1ME4a LINE L1 -34 6087 5967 1757 250 106 34 chr2 59314741 59315621 -191372233 - HAL1b LINE L1 -198 1150 208 24 53 0 0 chr2 59315624 59315662 -191372192 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 59316434 59316458 -191371396 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 59316534 59316558 -191371296 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr2 59317123 59317161 -191370693 + AT_rich Low_complexity Low_complexity 1 38 0 1423 189 96 85 chr2 59317497 59317972 -191369882 + MER66A LTR ERV1 97 478 0 942 346 103 30 chr2 59318503 59319112 -191368742 + L2 LINE L2 2222 2875 -439 297 230 120 99 chr2 59319243 59319434 -191368420 + L2 LINE L2 3118 3312 -1 218 31 0 31 chr2 59319434 59319466 -191368388 + (GGAA)n Simple_repeat Simple_repeat 1 31 0 2737 102 74 15 chr2 59320893 59321297 -191366557 - MSTA LTR MaLR 0 428 1 775 319 62 12 chr2 59321425 59321748 -191366106 + L3 LINE CR1 1225 1563 -14 1658 146 38 13 chr2 59322077 59322392 -191365462 + MER33 DNA MER1_type 1 323 -1 370 297 213 13 chr2 59322422 59322577 -191365277 - MIR SINE MIR -65 197 12 833 181 0 8 chr2 59323078 59323205 -191364649 + FLAM_C SINE Alu 2 127 -16 273 29 0 0 chr2 59323205 59323239 -191364615 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2460 171 35 35 chr2 59326243 59326729 -191361125 - MER66B LTR ERV1 0 486 1 1662 136 19 0 chr2 59327092 59327350 -191360504 - L1PA13 LINE L1 -1 6162 5900 2018 125 7 7 chr2 59327535 59327840 -191360014 - AluSx SINE Alu -7 305 1 194 300 0 17 chr2 59328149 59328209 -191359645 + MER5B DNA MER1_type 3 61 -117 2221 110 3 3 chr2 59328212 59328511 -191359343 + AluSq SINE Alu 1 299 -14 1014 260 175 3 chr2 59328553 59328941 -191358913 + L2 LINE L2 2859 3313 0 910 211 50 0 chr2 59328991 59329171 -191358683 + MER5A DNA MER1_type 1 189 0 202 267 100 0 chr2 59329568 59329628 -191358226 + MIR SINE MIR 3 68 -194 846 245 27 0 chr2 59329810 59329994 -191357860 + MER5A DNA MER1_type 1 189 0 2011 134 14 0 chr2 59331126 59331418 -191356436 + AluSx SINE Alu 1 296 -16 1553 86 5 5 chr2 59331576 59331786 -191356068 - L1PA14 LINE L1 -336 5825 5616 388 319 7 29 chr2 59331894 59332032 -191355822 + MER5A DNA MER1_type 55 189 0 251 276 155 52 chr2 59332477 59332651 -191355203 - MER117 DNA MER1_type 0 197 6 277 316 51 26 chr2 59332658 59332775 -191355079 + MIR SINE MIR 14 133 -129 196 242 95 32 chr2 59332793 59332888 -191354966 - MIR SINE MIR 0 262 162 543 275 19 12 chr2 59332975 59333135 -191354719 - MIR SINE MIR -4 258 98 898 188 44 22 chr2 59333155 59333336 -191354518 + MER5A DNA MER1_type 1 185 -4 273 271 38 95 chr2 59333822 59334032 -191353822 - MIR SINE MIR -31 231 34 2395 43 35 0 chr2 59334872 59335154 -191352700 - AluY SINE Alu -19 292 1 221 274 173 48 chr2 59335367 59335535 -191352319 + MER5A DNA MER1_type 1 189 0 312 286 127 8 chr2 59335879 59336005 -191351849 - MIR3 SINE MIR -38 170 30 397 316 26 0 chr2 59336084 59336236 -191351618 + MER103 DNA DNA 1 156 -10 2478 67 0 0 chr2 59336256 59336556 -191351298 - AluY SINE Alu -11 300 1 537 248 181 9 chr2 59337702 59337912 -191349942 + MIR SINE MIR 17 262 0 229 196 238 49 chr2 59337924 59338067 -191349787 - L1ME4a LINE L1 -92 6029 5860 449 319 52 26 chr2 59338094 59338326 -191349528 + MIR SINE MIR 19 256 -6 1721 96 4 4 chr2 59338585 59338815 -191349039 - AluSx SINE Alu -78 234 5 1203 202 86 10 chr2 59339056 59339322 -191348532 - MLT1A1 LTR MaLR 0 365 76 3260 111 18 7 chr2 59339322 59339764 -191348090 - MER83 LTR ERV1 0 448 2 1203 202 86 10 chr2 59339764 59339807 -191348047 - MLT1A1 LTR MaLR -289 76 38 659 262 65 96 chr2 59339807 59340162 -191347692 - L1ME4a LINE L1 -741 5439 5492 2586 74 0 0 chr2 59340162 59340473 -191347381 - AluY SINE Alu 0 311 1 659 262 65 96 chr2 59340473 59340703 -191347151 - L1ME4a LINE L1 -687 5493 5257 326 159 3 14 chr2 59340842 59340910 -191346944 + MLT1A1 LTR MaLR 1 52 -313 1288 300 84 21 chr2 59341339 59341816 -191346038 + MLT1K LTR MaLR 66 572 -16 2117 155 0 0 chr2 59344031 59344341 -191343513 - AluSx SINE Alu -2 310 1 2320 96 0 3 chr2 59344341 59344643 -191343211 - AluSq SINE Alu -11 302 1 61 15 0 0 chr2 59344646 59344714 -191343140 + AT_rich Low_complexity Low_complexity 1 68 0 484 195 0 0 chr2 59345023 59345105 -191342749 - MER81 DNA DNA -32 82 1 716 213 0 8 chr2 59345444 59345571 -191342283 - FLAM_C SINE Alu -16 127 2 491 186 10 29 chr2 59346036 59346138 -191341716 - MER5A DNA MER1_type -83 106 7 2475 71 3 0 chr2 59349047 59349357 -191338497 + AluY SINE Alu 1 311 0 352 262 24 87 chr2 59350193 59350319 -191337535 + MIR3 SINE MIR 79 196 -12 308 82 0 20 chr2 59350527 59350576 -191337278 + (CA)n Simple_repeat Simple_repeat 1 48 0 24 0 0 0 chr2 59351409 59351433 -191336421 + AT_rich Low_complexity Low_complexity 1 24 0 225 132 0 0 chr2 59352171 59352209 -191335645 + L1M4 LINE L1 3883 3920 -2226 626 222 43 97 chr2 59352219 59352426 -191335428 - MIR SINE MIR -34 228 33 378 262 85 50 chr2 59352543 59352684 -191335170 + L2 LINE L2 3168 3313 0 298 361 41 12 chr2 59353906 59354075 -191333779 - MER20B DNA MER1_type -596 187 14 254 143 0 107 chr2 59354089 59354145 -191333709 - Charlie8 DNA MER1_type -989 1428 1379 195 242 44 66 chr2 59354350 59354441 -191333413 + L2 LINE L2 3184 3272 0 188 283 19 19 chr2 59356232 59356285 -191331569 + MIR SINE MIR 35 87 -175 2385 73 0 13 chr2 59356518 59356821 -191331033 - AluY SINE Alu -12 299 1 477 285 7 7 chr2 59357002 59357146 -191330708 + MIR SINE MIR 117 260 -2 316 317 48 26 chr2 59358315 59358542 -191329312 - L2 LINE L2 -817 2497 2266 21 0 0 0 chr2 59358902 59358923 -191328931 + AT_rich Low_complexity Low_complexity 1 21 0 181 250 21 0 chr2 59359503 59359551 -191328303 - MIR SINE MIR -111 151 103 630 289 73 12 chr2 59359803 59360049 -191327805 + MIR SINE MIR 1 261 -1 466 241 88 74 chr2 59360447 59360736 -191327118 + Charlie8 DNA MER1_type 29 1413 -1004 512 296 246 23 chr2 59360862 59361302 -191326552 + Tigger8 DNA MER2_type 119 656 -10 307 227 216 67 chr2 59361537 59361607 -191326247 + MIR SINE MIR 40 98 -164 2107 132 0 0 chr2 59361607 59361902 -191325952 - AluSx SINE Alu -17 295 1 307 227 216 67 chr2 59361902 59362025 -191325829 + MIR SINE MIR 98 262 0 1005 182 117 35 chr2 59363018 59363289 -191324565 + L1MD2 LINE L1 5851 6083 -159 1387 136 18 0 chr2 59363918 59364138 -191323716 - AluSp SINE Alu -8 305 82 26 88 0 0 chr2 59364599 59364667 -191323187 + AT_rich Low_complexity Low_complexity 1 68 0 1929 141 3 3 chr2 59364703 59364993 -191322861 - AluSx SINE Alu -22 290 1 26 0 0 0 chr2 59364995 59365021 -191322833 + AT_rich Low_complexity Low_complexity 1 26 0 2455 58 6 10 chr2 59365217 59365529 -191322325 - AluY SINE Alu 0 311 1 23 33 0 0 chr2 59365630 59365660 -191322194 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr2 59365839 59365879 -191321975 + AT_rich Low_complexity Low_complexity 1 40 0 494 216 97 37 chr2 59365892 59366026 -191321828 - MER58B DNA MER1_type -5 336 195 715 176 40 128 chr2 59367213 59367440 -191320414 + MER106A DNA MER1_type 1 207 -29 271 322 47 47 chr2 59368599 59368813 -191319041 - L2 LINE L2 -167 3105 2892 189 0 0 0 chr2 59368859 59368880 -191318974 + (T)n Simple_repeat Simple_repeat 1 21 0 229 207 69 17 chr2 59369554 59369612 -191318242 - MIR3 SINE MIR -3 205 145 801 302 30 13 chr2 59369624 59369859 -191317995 + MIR SINE MIR 2 240 -22 508 268 28 21 chr2 59369876 59370018 -191317836 - MIR3 SINE MIR -50 158 16 1148 133 0 12 chr2 59370442 59370608 -191317246 + AluJo SINE Alu 11 174 -138 377 107 0 0 chr2 59371292 59371348 -191316506 + MADE1 DNA Mariner 25 80 0 235 198 49 12 chr2 59372364 59372445 -191315409 + (TA)n Simple_repeat Simple_repeat 1 84 0 21 0 0 0 chr2 59373588 59373609 -191314245 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 59374686 59374717 -191313137 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 59377272 59377301 -191310553 + AT_rich Low_complexity Low_complexity 1 29 0 201 196 0 0 chr2 59377998 59378049 -191309805 + CT-rich Low_complexity Low_complexity 2 52 0 186 71 0 0 chr2 59378198 59378226 -191309628 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 2295 77 3 13 chr2 59379129 59379429 -191308425 - AluY SINE Alu -14 297 1 657 120 0 0 chr2 59379429 59379521 -191308333 - AluSc SINE Alu -176 133 42 376 293 0 9 chr2 59380827 59380933 -191306921 - MIR SINE MIR -108 154 50 353 306 120 24 chr2 59383036 59383245 -191304609 + MARNA DNA Mariner 22 250 -336 13696 132 35 23 chr2 59383707 59386096 -191301758 - Tigger1 DNA MER2_type 0 2418 1 254 51 103 0 chr2 59386159 59386198 -191301656 - L1MA1 LINE L1 -353 5949 5907 * 5495 163 28 5 chr2 59386195 59388092 -191299762 - L1MA5 LINE L1 -13 6287 4361 6562 57 84 0 chr2 59388097 59389179 -191298675 - L1PA7 LINE L1 -13 6141 5028 2246 218 41 17 chr2 59390385 59390926 -191296928 - L1MB7 LINE L1 -21 6661 6108 1035 92 33 7 chr2 59390928 59391081 -191296773 - AluSq SINE Alu -141 172 16 563 177 9 18 chr2 59391081 59391194 -191296660 - L1MB7 LINE L1 -575 6103 5992 314 237 93 0 chr2 59391200 59391297 -191296557 - L1MB7 LINE L1 -809 5872 5767 * 3309 214 33 9 chr2 59391287 59392126 -191295728 - L1MB7 LINE L1 -1392 5252 4394 2257 279 77 34 chr2 59392126 59393000 -191294854 - L1MB7 LINE L1 -5631 911 1 293 266 85 55 chr2 59394496 59394695 -191293159 - MLT1K LTR MaLR 0 588 384 536 307 48 6 chr2 59395364 59395696 -191292158 + L1ME3A LINE L1 3593 3938 -2208 393 302 101 31 chr2 59396249 59398078 -191289776 + L1ME3A LINE L1 3973 5948 -222 1768 53 0 0 chr2 59399078 59399303 -191288551 - L1PA4 LINE L1 -860 5286 5062 * 4738 22 0 0 chr2 59399298 59399851 -191288003 + L1PA4 LINE L1 5284 5836 -319 894 147 147 35 chr2 59399987 59400184 -191287670 - MER20 DNA MER1_type 0 219 1 23 33 0 0 chr2 59401430 59401460 -191286394 + AT_rich Low_complexity Low_complexity 1 30 0 305 347 8 0 chr2 59401509 59401633 -191286221 - MIR3 SINE MIR -6 202 78 22 0 0 0 chr2 59402012 59402034 -191285820 + AT_rich Low_complexity Low_complexity 1 22 0 701 155 99 0 chr2 59402342 59402484 -191285370 - L1M4 LINE L1 -714 5460 5305 * 1367 185 38 142 chr2 59402481 59403003 -191284851 + L1MB7 LINE L1 5629 6091 -93 2480 126 8 3 chr2 59403003 59403376 -191284478 - THE1C LTR MaLR 0 375 1 1367 185 38 142 chr2 59403376 59403409 -191284445 + L1MB7 LINE L1 6091 6126 -58 24 0 0 0 chr2 59403517 59403541 -191284313 + AT_rich Low_complexity Low_complexity 1 24 0 7967 91 11 0 chr2 59403584 59405492 -191282362 - L1PA6 LINE L1 0 6154 4233 7230 48 0 0 chr2 59405486 59406559 -191281295 - L1PA4 LINE L1 0 6155 5102 * 12994 48 3 0 chr2 59406564 59408179 -191279675 + L1PA4 LINE L1 3484 5103 -1043 * 22047 114 67 9 chr2 59408171 59412159 -191275695 - L1PA6 LINE L1 -1894 4252 11 2272 247 33 7 chr2 59412734 59413459 -191274395 - L1M4 LINE L1 -3227 2919 2176 2175 186 4 47 chr2 59413493 59414008 -191273846 - L1MC2 LINE L1 -175 6587 6095 1750 258 63 28 chr2 59414008 59414773 -191273081 - L1MC2 LINE L1 -1647 4917 4126 1326 203 129 25 chr2 59414782 59415215 -191272639 - L1MC2 LINE L1 -4198 2366 1889 * 1904 237 50 9 chr2 59415203 59415765 -191272089 - L1MC2 LINE L1 -4891 1154 570 1688 247 12 47 chr2 59415869 59416447 -191271407 - L1MC2 LINE L1 -5485 560 3 2007 120 7 14 chr2 59416554 59416880 -191270974 + AluSq SINE Alu 1 324 0 194 344 22 11 chr2 59417049 59417139 -191270715 + L2 LINE L2 3223 3313 0 25 0 0 0 chr2 59417474 59417499 -191270355 + AT_rich Low_complexity Low_complexity 1 25 0 510 186 53 0 chr2 59418866 59418979 -191268875 + Charlie4 DNA MER1_type 1823 1941 -20 292 256 25 128 chr2 59419630 59419911 -191267943 - MER112 DNA MER1_type 0 260 9 748 319 4 26 chr2 59420083 59420349 -191267505 - MIR SINE MIR -1 261 2 207 88 0 0 chr2 59420517 59420551 -191267303 + (T)n Simple_repeat Simple_repeat 1 34 0 230 230 27 0 chr2 59421410 59421484 -191266370 + CT-rich Low_complexity Low_complexity 2 77 0 253 175 53 53 chr2 59421501 59421558 -191266296 - L2 LINE L2 -16 3256 3200 2935 67 40 94 chr2 59422115 59422551 -191265303 + MLT2A2 LTR ERVL 1 410 -43 1004 134 6 0 chr2 59422551 59422722 -191265132 + (TA)n Simple_repeat Simple_repeat 2 173 0 2935 67 40 94 chr2 59422722 59422764 -191265090 + MLT2A2 LTR ERVL 410 453 0 40405 84 9 13 chr2 59422764 59428190 -191259664 + HERVL-A2-A2 LTR ERVL 1 5404 -250 2719 35 0 0 chr2 59428190 59428501 -191259353 - AluY SINE Alu 0 311 1 40405 84 9 13 chr2 59428501 59428751 -191259103 + HERVL-A2-A2 LTR ERVL 5404 5654 0 3142 88 44 0 chr2 59428751 59429133 -191258721 + MLT2A2 LTR ERVL 1 406 -47 306 0 0 0 chr2 59429133 59429167 -191258687 + (CA)n Simple_repeat Simple_repeat 1 34 0 3142 88 44 0 chr2 59429167 59429218 -191258636 + MLT2A2 LTR ERVL 406 453 0 232 353 49 55 chr2 59429219 59429551 -191258303 + L2 LINE L2 2730 3060 -212 187 400 138 7 chr2 59429678 59429823 -191258031 + L2 LINE L2 3096 3259 -13 27 0 0 0 chr2 59430533 59430560 -191257294 + AT_rich Low_complexity Low_complexity 1 27 0 642 299 88 53 chr2 59430865 59431296 -191256558 - LTR33A LTR ERVL 0 523 78 2287 112 0 0 chr2 59431800 59432103 -191255751 - AluSx SINE Alu -9 303 1 459 297 135 64 chr2 59432668 59433089 -191254765 - L3 LINE CR1 -328 1249 799 204 328 72 8 chr2 59433779 59433904 -191253950 - L2 LINE L2 -633 2681 2549 2562 110 6 3 chr2 59434490 59434853 -191253001 + THE1B LTR MaLR 1 364 0 692 328 11 34 chr2 59435105 59435456 -191252398 - MLT1I LTR MaLR -47 362 20 22 0 0 0 chr2 59435492 59435514 -191252340 + AT_rich Low_complexity Low_complexity 1 22 0 227 179 54 0 chr2 59435698 59435754 -191252100 - MER103 DNA DNA -26 140 82 387 234 18 72 chr2 59435789 59435956 -191251898 + L1ME4a LINE L1 5765 5922 -199 312 211 222 0 chr2 59436124 59436214 -191251640 + MIR SINE MIR 104 213 -49 1322 133 16 0 chr2 59436250 59436438 -191251416 - AluSx SINE Alu -2 310 120 41580 43 2 2 chr2 59436445 59442594 -191245260 - L1PA4 LINE L1 -8 6147 1 927 136 8 0 chr2 59442605 59442737 -191245117 - AluSx SINE Alu -180 133 1 353 87 0 43 chr2 59444534 59444604 -191243250 - L1MA8 LINE L1 -330 5970 5914 * 952 186 93 0 chr2 59444592 59444839 -191243015 + L1MA8 LINE L1 6000 6269 -22 30 45 0 0 chr2 59444848 59444892 -191242962 + AT_rich Low_complexity Low_complexity 1 44 0 286 349 9 9 chr2 59444960 59445066 -191242788 + L2 LINE L2 3167 3272 0 411 337 35 0 chr2 59445134 59445336 -191242518 - LTR16A LTR ERVL 0 450 242 780 346 22 47 chr2 59445927 59446461 -191241393 - ERVL LTR ERVL -964 4800 4280 792 202 5 31 chr2 59448181 59448374 -191239480 + MER3 DNA MER1_type 22 209 0 234 0 0 0 chr2 59448441 59448467 -191239387 + (T)n Simple_repeat Simple_repeat 1 26 0 266 327 45 58 chr2 59448634 59448790 -191239064 - L2 LINE L2 -10 3262 3109 815 263 86 40 chr2 59448889 59449285 -191238569 + MLT1C LTR MaLR 54 467 0 530 250 68 14 chr2 59449460 59449608 -191238246 + L2 LINE L2 3158 3313 0 4293 163 34 12 chr2 59450400 59451254 -191236600 + L1MA8 LINE L1 5405 6277 -14 778 145 95 0 chr2 59451269 59451448 -191236406 + L1MA8 LINE L1 6025 6220 -71 195 100 0 0 chr2 59451841 59451871 -191235983 + (TC)n Simple_repeat Simple_repeat 1 30 0 1466 194 52 10 chr2 59452199 59452320 -191235534 + AluJo SINE Alu 2 116 -196 411 21 0 0 chr2 59452320 59452368 -191235486 + (TAA)n Simple_repeat Simple_repeat 2 49 0 1466 194 52 10 chr2 59452368 59452534 -191235320 + AluJo SINE Alu 116 301 -11 2091 113 7 45 chr2 59452842 59453151 -191234703 + AluSg SINE Alu 5 301 -9 221 405 0 13 chr2 59454344 59454423 -191233431 - MIR SINE MIR -164 98 21 439 281 70 70 chr2 59455696 59455816 -191232038 + MIR SINE MIR 3 122 -140 1799 203 28 0 chr2 59455816 59456171 -191231683 + MLT1A1 LTR MaLR 1 365 0 439 281 70 70 chr2 59456171 59456298 -191231556 + MIR SINE MIR 122 249 -13 253 246 0 0 chr2 59458083 59458140 -191229714 + L2 LINE L2 3257 3313 0 530 262 18 60 chr2 59458891 59459059 -191228795 - L2 LINE L2 0 3313 3153 301 283 98 40 chr2 59459329 59459502 -191228352 - MIR SINE MIR -57 205 23 239 336 119 14 chr2 59459781 59459924 -191227930 + L2 LINE L2 2329 2486 -828 245 350 0 0 chr2 59460197 59460257 -191227597 + L2 LINE L2 3207 3266 -47 1786 241 112 25 chr2 59460319 59460837 -191227017 + MLT1E LTR MaLR 31 593 0 279 54 0 0 chr2 59461952 59461989 -191225865 - L1PA6 LINE L1 -7 6147 6111 185 286 57 29 chr2 59462307 59462377 -191225477 - MIR3 SINE MIR -129 79 8 7050 59 4 1 chr2 59462389 59463332 -191224522 - L1P LINE L1 -2939 3207 2262 7375 40 1 1 chr2 59463332 59464473 -191223381 + L1PA4 LINE L1 5014 6154 -1 30 69 0 0 chr2 59464476 59464534 -191223320 + AT_rich Low_complexity Low_complexity 1 58 0 2055 133 17 0 chr2 59464550 59464852 -191223002 + AluSx SINE Alu 1 307 -5 15560 30 0 0 chr2 59465502 59468131 -191219723 - L1PA3 LINE L1 0 6155 3529 15945 28 0 0 chr2 59468131 59470067 -191217787 + L1PA3 LINE L1 1576 3511 -2635 321 331 111 52 chr2 59470428 59470600 -191217254 - MIR3 SINE MIR -8 200 19 315 71 0 0 chr2 59470731 59470773 -191217081 + (TG)n Simple_repeat Simple_repeat 2 43 0 1031 378 24 2 chr2 59470960 59471415 -191216439 + MER115 DNA AcHobo 225 689 -4 237 114 0 0 chr2 59471719 59471754 -191216100 - L2 LINE L2 0 3313 3279 373 338 60 39 chr2 59472614 59472898 -191214956 + HERV16 LTR ERVL 1272 1561 -3435 180 0 0 0 chr2 59472911 59472931 -191214923 + (TTA)n Simple_repeat Simple_repeat 1 20 0 2122 119 0 0 chr2 59472945 59473267 -191214587 + AluSq SINE Alu 1 322 0 505 333 106 15 chr2 59473305 59473578 -191214276 + HERV16 LTR ERVL 1734 2031 -2965 26 0 0 0 chr2 59474581 59474607 -191213247 + AT_rich Low_complexity Low_complexity 1 26 0 4927 162 27 3 chr2 59474607 59475268 -191212586 - L1PA16 LINE L1 -9 6860 6171 2019 134 3 13 chr2 59475268 59475581 -191212273 - AluSx SINE Alu -2 310 1 4927 162 27 3 chr2 59475581 59475868 -191211986 - L1PA16 LINE L1 -698 6171 5892 * 9737 168 25 63 chr2 59475865 59476387 -191211467 - L1PA16 LINE L1 -4176 2673 2133 2194 113 0 3 chr2 59476387 59476688 -191211166 - AluSg SINE Alu -10 300 1 9737 168 25 63 chr2 59476688 59479062 -191208792 - L1PA16 LINE L1 -4716 2133 1 782 242 17 69 chr2 59481205 59481436 -191206418 - MER20 DNA MER1_type 0 219 1 384 314 117 16 chr2 59481486 59481674 -191206180 - MLT1J2 LTR MaLR -41 409 203 1894 152 37 52 chr2 59482867 59483043 -191204811 + THE1C LTR MaLR 1 178 -197 2099 94 7 0 chr2 59483043 59483342 -191204512 - L1PA8 LINE L1 -11 6161 5861 1894 152 37 52 chr2 59483342 59483546 -191204308 + THE1C LTR MaLR 178 375 0 2382 55 3 0 chr2 59483707 59483997 -191203857 + AluY SINE Alu 3 293 -18 229 167 17 17 chr2 59484040 59484100 -191203754 + (TA)n Simple_repeat Simple_repeat 1 60 0 491 257 169 7 chr2 59485342 59485490 -191202364 - MER5A DNA MER1_type -5 184 13 544 300 49 33 chr2 59485601 59485844 -191202010 + MIR SINE MIR 16 262 0 375 299 19 19 chr2 59486360 59486467 -191201387 + MIR SINE MIR 36 142 -66 4113 34 0 0 chr2 59487853 59488355 -191199499 - L1P LINE L1 -4279 1867 1366 7932 9 0 0 chr2 59488355 59489277 -191198577 + L1PA2 LINE L1 5233 6154 -1 270 75 189 0 chr2 59489285 59489338 -191198516 - Tigger3(Golem) DNA MER2_type -420 2609 2547 294 292 163 19 chr2 59491624 59491833 -191196021 - MIR SINE MIR -14 248 10 398 286 37 12 chr2 59492633 59492794 -191195060 - MER103 DNA DNA -1 165 1 241 306 163 14 chr2 59493216 59493363 -191194491 + MIR SINE MIR 47 215 -47 7276 226 12 4 chr2 59495420 59497244 -191190610 + L1PA12 LINE L1 2817 4663 -2921 3927 205 12 18 chr2 59497250 59498146 -191189708 - L1P LINE L1 -1956 4190 3300 1580 152 4 0 chr2 59498147 59498391 -191189463 + L1PA15 LINE L1 5912 6156 -9 1067 269 16 71 chr2 59499078 59499516 -191188338 + L1ME1 LINE L1 34 447 -5949 5979 262 58 30 chr2 59499534 59502789 -191185065 + L1ME1 LINE L1 2898 6229 -6 303 308 44 19 chr2 59503072 59503231 -191184623 - L1 LINE L1 -1925 4221 4059 345 348 72 13 chr2 59503339 59503575 -191184279 - L1 LINE L1 -2171 3975 3726 421 259 64 91 chr2 59504435 59504655 -191183199 - MER58C DNA MER1_type -1 214 1 333 0 0 0 chr2 59504907 59504944 -191182910 + (TG)n Simple_repeat Simple_repeat 2 38 0 612 333 47 32 chr2 59506534 59506976 -191180878 + L2 LINE L2 2697 3145 -168 282 163 12 23 chr2 59507354 59507440 -191180414 + (TA)n Simple_repeat Simple_repeat 2 86 0 33 80 0 0 chr2 59507981 59508056 -191179798 + AT_rich Low_complexity Low_complexity 1 75 0 454 288 140 86 chr2 59508443 59508922 -191178932 + MLT1H LTR MaLR 32 536 -13 771 199 153 30 chr2 59508926 59509162 -191178692 - L1MD3 LINE L1 -8 7987 7723 461 277 170 0 chr2 59509269 59509428 -191178426 - MER5A DNA MER1_type 0 189 4 182 156 67 22 chr2 59510419 59510464 -191177390 - L3 LINE CR1 -304 1273 1227 462 295 95 0 chr2 59511986 59512176 -191175678 + MIR SINE MIR 4 211 -51 1912 214 70 47 chr2 59513209 59514146 -191173708 - MER63C DNA MER1_type -93 837 2 1369 192 107 65 chr2 59514315 59514762 -191173092 - MER31B LTR ERV1 0 466 1 24 32 0 0 chr2 59515973 59516004 -191171850 + AT_rich Low_complexity Low_complexity 1 31 0 375 172 49 25 chr2 59516028 59516150 -191171704 + L1ME4a LINE L1 5991 6115 -6 21 0 0 0 chr2 59516362 59516383 -191171471 + AT_rich Low_complexity Low_complexity 1 21 0 336 299 141 32 chr2 59516727 59517252 -191170602 - HAL1 LINE L1 -766 1741 1160 2461 71 3 0 chr2 59517928 59518238 -191169616 + AluY SINE Alu 1 311 0 199 346 77 31 chr2 59518636 59518766 -191169088 - MIR SINE MIR -108 154 19 350 306 45 30 chr2 59518941 59519075 -191168779 - MIR SINE MIR 0 262 127 235 234 11 117 chr2 59519075 59519169 -191168685 + MER58 DNA MER1_type 12 95 -2325 335 212 40 20 chr2 59519186 59519285 -191168569 + MER58 DNA MER1_type 2318 2418 -2 315 0 0 0 chr2 59519506 59519541 -191168313 + (TG)n Simple_repeat Simple_repeat 2 36 0 1002 162 71 10 chr2 59521485 59521682 -191166172 - MER2 DNA MER2_type -136 209 1 1289 116 0 73 chr2 59522165 59522397 -191165457 + L1M1 LINE L1 5560 5774 -530 23 54 0 0 chr2 59522843 59522880 -191164974 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr2 59522924 59522947 -191164907 + AT_rich Low_complexity Low_complexity 1 23 0 340 245 52 18 chr2 59523530 59523642 -191164212 + MER58B DNA MER1_type 5 106 -235 354 190 38 0 chr2 59523678 59523757 -191164097 - MER53 DNA DNA -106 83 2 2538 108 0 6 chr2 59524361 59524714 -191163140 + MER9 LTR ERVK 161 511 0 20065 82 7 6 chr2 59524714 59525476 -191162378 + HERVK9 LTR ERVK 1 760 -5156 181 250 0 83 chr2 59525476 59525536 -191162318 + MER5B DNA MER1_type 55 109 -69 20065 82 7 6 chr2 59525536 59527496 -191160358 + HERVK9 LTR ERVK 760 2786 -3130 3407 26 0 0 chr2 59527496 59527886 -191159968 + HERVK9 LTR ERVK 3711 4100 -1816 * 4988 83 6 0 chr2 59527885 59528535 -191159319 + HERVK9 LTR ERVK 4981 5634 -282 2189 128 7 4 chr2 59528560 59528905 -191158949 + HERVK9 LTR ERVK 5635 5911 -5 3496 118 6 4 chr2 59528910 59529420 -191158434 + MER9 LTR ERVK 1 511 0 9780 44 7 6 chr2 59529420 59531108 -191156746 - L1PA5 LINE L1 -325 5829 4145 6158 57 1 2 chr2 59531108 59531896 -191155958 + L1PA5 LINE L1 3355 4141 -2005 5581 131 2 14 chr2 59531901 59532817 -191155037 - L1PA15 LINE L1 -6 6159 5255 2357 179 33 8 chr2 59532813 59533294 -191154560 + L1PA15 LINE L1 4731 5223 -923 * 198 220 0 0 chr2 59533598 59533657 -191154197 + (TA)n Simple_repeat Simple_repeat 1 59 0 582 349 73 35 chr2 59534846 59535432 -191152422 + L2 LINE L2 2432 3043 -229 579 297 35 55 chr2 59535474 59535646 -191152208 + MIR SINE MIR 12 179 -83 3508 164 26 10 chr2 59535646 59536325 -191151529 + L1MA6 LINE L1 5598 6287 -13 579 297 35 55 chr2 59536325 59536408 -191151446 + MIR SINE MIR 179 262 0 183 377 84 78 chr2 59536442 59536596 -191151258 + L2 LINE L2 3110 3264 -8 222 128 0 0 chr2 59537829 59537868 -191149986 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2697 172 28 2 chr2 59538896 59539368 -191148486 + Tigger1 DNA MER2_type 13 496 -1922 2684 35 0 0 chr2 59539368 59539684 -191148170 - L1P1 LINE L1 -381 5774 5459 1924 31 0 0 chr2 59539684 59539911 -191147943 + L1PA5 LINE L1 5919 6145 -9 468 116 0 0 chr2 59539922 59539991 -191147863 + Tigger1 DNA MER2_type 482 550 -1868 * 8671 136 35 24 chr2 59539975 59541457 -191146397 + Tigger1 DNA MER2_type 920 2418 0 237 108 0 0 chr2 59544538 59544575 -191143279 + (TCCCC)n Simple_repeat Simple_repeat 2 38 0 271 263 0 0 chr2 59544576 59544633 -191143221 + CT-rich Low_complexity Low_complexity 4 60 0 21 0 0 0 chr2 59544728 59544749 -191143105 + AT_rich Low_complexity Low_complexity 1 21 0 268 275 22 0 chr2 59544752 59544843 -191143011 - L1M4 LINE L1 -2117 4029 3937 204 97 0 0 chr2 59545150 59545181 -191142673 + (TG)n Simple_repeat Simple_repeat 2 32 0 42 20 0 0 chr2 59545243 59545292 -191142562 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr2 59545344 59545366 -191142488 + AT_rich Low_complexity Low_complexity 1 22 0 371 273 79 4 chr2 59545468 59545695 -191142159 - L1M4 LINE L1 -2923 3223 2980 22 35 0 0 chr2 59545825 59545854 -191142000 + AT_rich Low_complexity Low_complexity 1 29 0 212 354 85 46 chr2 59546105 59546235 -191141619 + MIR SINE MIR 1 135 -127 915 240 55 16 chr2 59547027 59547509 -191140345 + MER34 LTR ERV1 11 542 0 309 51 0 0 chr2 59548874 59548913 -191138941 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr2 59548946 59548981 -191138873 + AT_rich Low_complexity Low_complexity 1 35 0 26 50 0 0 chr2 59549055 59549095 -191138759 + AT_rich Low_complexity Low_complexity 1 40 0 515 241 80 19 chr2 59549711 59549873 -191137981 - MER5B DNA MER1_type -4 174 3 437 272 54 60 chr2 59549966 59550150 -191137704 - MIR SINE MIR -33 229 47 982 238 59 18 chr2 59550341 59550627 -191137227 + MER58B DNA MER1_type 39 336 -5 24 0 0 0 chr2 59550647 59550671 -191137183 + AT_rich Low_complexity Low_complexity 1 24 0 1311 168 31 0 chr2 59550799 59551055 -191136799 - L1MA6 LINE L1 -322 5978 5715 506 295 22 27 chr2 59551391 59551574 -191136280 + MER5A DNA MER1_type 2 183 -6 462 256 50 33 chr2 59551914 59552094 -191135760 + LTR33 LTR ERVL 1 183 -338 223 414 6 25 chr2 59552448 59552605 -191135249 + L2 LINE L2 2907 3060 -212 209 265 36 0 chr2 59554316 59554399 -191133455 + (TA)n Simple_repeat Simple_repeat 2 87 0 21 0 0 0 chr2 59556365 59556386 -191131468 + AT_rich Low_complexity Low_complexity 1 21 0 476 250 16 0 chr2 59557131 59557259 -191130595 + MER115 DNA AcHobo 553 682 -11 230 346 96 0 chr2 59557632 59557736 -191130118 - MIR SINE MIR -77 131 18 245 278 59 91 chr2 59557753 59557940 -191129914 + L2 LINE L2 3114 3294 -19 395 319 49 5 chr2 59557979 59558181 -191129673 + MIR SINE MIR 12 218 -44 304 231 48 87 chr2 59560309 59560413 -191127441 - L2 LINE L2 -21 3292 3193 27 49 0 0 chr2 59562061 59562102 -191125752 + AT_rich Low_complexity Low_complexity 1 41 0 211 244 115 26 chr2 59562328 59562406 -191125448 - L2 LINE L2 -20 3252 3168 349 321 187 23 chr2 59562442 59562747 -191125107 + L2 LINE L2 2292 2646 -668 436 298 8 0 chr2 59562907 59563031 -191124823 - MIR SINE MIR -15 247 123 992 215 56 0 chr2 59563861 59564075 -191123779 - MLT1E LTR MaLR -23 570 345 850 226 37 46 chr2 59564086 59564303 -191123551 - MLT1E LTR MaLR -353 240 26 788 238 0 0 chr2 59564344 59564487 -191123367 - FRAM SINE Alu -25 151 9 7402 88 0 0 chr2 59564917 59566749 -191121105 + L1PA7 LINE L1 4323 6148 -6 252 77 0 0 chr2 59568435 59568474 -191119380 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 29 47 0 0 chr2 59568682 59568725 -191119129 + AT_rich Low_complexity Low_complexity 1 43 0 267 31 0 0 chr2 59569497 59569529 -191118325 + (TA)n Simple_repeat Simple_repeat 2 33 0 268 340 62 21 chr2 59570055 59570199 -191117655 - MIR3 SINE MIR -18 190 41 2283 116 47 14 chr2 59571019 59571382 -191116472 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 59571620 59571641 -191116213 + AT_rich Low_complexity Low_complexity 1 21 0 208 321 12 37 chr2 59573294 59573375 -191114479 + L2 LINE L2 3103 3181 -91 26 50 0 0 chr2 59573720 59573760 -191114094 + AT_rich Low_complexity Low_complexity 1 40 0 267 333 10 10 chr2 59574646 59574745 -191113109 - L2 LINE L2 -360 2912 2814 335 325 86 68 chr2 59574779 59575013 -191112841 - MIR SINE MIR -6 256 19 381 373 0 16 chr2 59575691 59575817 -191112037 - L2 LINE L2 -4 3268 3145 2011 189 65 2 chr2 59575818 59576263 -191111591 + L1MB7 LINE L1 5529 6001 -183 429 174 0 0 chr2 59576270 59576362 -191111492 - L1M4 LINE L1 -2367 3779 3688 296 280 53 8 chr2 59576423 59576555 -191111299 + L1ME2 LINE L1 3437 3574 -2572 * 473 240 14 7 chr2 59576523 59576669 -191111185 + L1ME2 LINE L1 4456 4602 -1544 1227 114 19 6 chr2 59577006 59577023 -191110831 - MLT2A1 LTR ERVL -24 530 515 216 0 0 0 chr2 59577023 59577047 -191110807 + (TA)n Simple_repeat Simple_repeat 1 24 0 1227 114 19 6 chr2 59577047 59577217 -191110637 - MLT2A1 LTR ERVL -39 515 221 402 327 93 25 chr2 59577386 59577741 -191110113 + L1ME2 LINE L1 5254 5632 -534 246 231 13 13 chr2 59577758 59577836 -191110018 + MER112 DNA MER1_type 8 85 -175 3623 125 36 0 chr2 59578116 59578692 -191109162 - L1PA13 LINE L1 -3 6160 5564 271 273 90 19 chr2 59578708 59578917 -191108937 + L1ME2 LINE L1 5731 5959 -205 1632 180 10 26 chr2 59580338 59580644 -191107210 - AluJo SINE Alu -9 303 3 350 179 53 21 chr2 59580994 59581089 -191106765 + L1MCc LINE L1 31 128 -6295 * 15512 74 1 0 chr2 59581077 59583074 -191104780 - L1P LINE L1 -4024 2122 125 399 125 0 16 chr2 59583137 59583195 -191104659 - MLT1A1 LTR MaLR 0 365 309 1607 149 0 31 chr2 59583195 59583450 -191104404 - MER1B DNA MER1_type 0 339 133 1341 214 40 7 chr2 59583451 59583727 -191104127 - MLT1A1 LTR MaLR -80 285 1 1458 217 25 3 chr2 59583739 59584025 -191103829 - MLT2B1 LTR ERVL -227 293 2 1694 315 14 29 chr2 59584526 59585145 -191102709 + L1PA13 LINE L1 788 1397 -6177 322 333 0 0 chr2 59585250 59585349 -191102505 + L1PA13 LINE L1 2084 2182 -5399 659 314 23 22 chr2 59585606 59585927 -191101927 + L1PA13 LINE L1 2203 2448 -5126 13591 260 28 12 chr2 59586106 59590389 -191097465 + L1PA13 LINE L1 2466 6817 -767 214 293 17 0 chr2 59590830 59590888 -191096966 + GA-rich Low_complexity Low_complexity 3 61 0 889 312 62 109 chr2 59591288 59591729 -191096125 + L2 LINE L2 1932 2392 -921 204 97 0 0 chr2 59591729 59591760 -191096094 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 889 312 62 109 chr2 59591760 59592504 -191095350 + L2 LINE L2 2392 3060 -253 372 183 0 0 chr2 59592673 59592744 -191095110 + L1MA6 LINE L1 6151 6221 -79 731 259 48 0 chr2 59592757 59592923 -191094931 + MER5A DNA MER1_type 16 189 0 398 269 19 0 chr2 59593012 59593116 -191094738 + L2 LINE L2 3194 3299 -14 267 321 143 9 chr2 59593225 59593337 -191094517 + L2 LINE L2 3141 3267 -5 353 326 0 53 chr2 59593353 59593485 -191094369 - L2 LINE L2 0 3313 3189 2260 112 0 0 chr2 59593555 59593858 -191093996 - AluSx SINE Alu -9 303 1 697 300 39 9 chr2 59594190 59594423 -191093431 - MIR SINE MIR -10 252 13 509 236 97 7 chr2 59596676 59596820 -191091034 - L1MB7 LINE L1 -10 6174 6018 * 2145 224 43 16 chr2 59596819 59597425 -191090429 - L1MEc LINE L1 -1262 5695 5074 3950 153 40 6 chr2 59597425 59598100 -191089754 + MER50 LTR ERV1 1 698 -36 6359 238 62 18 chr2 59598120 59600299 -191087555 - L1MEc LINE L1 -1889 5068 2821 1915 219 79 15 chr2 59600299 59600770 -191087084 + MLT1D LTR MaLR 3 503 -2 6359 238 62 18 chr2 59600770 59601015 -191086839 - L1MEc LINE L1 -4136 2821 2588 1158 101 0 0 chr2 59601063 59601211 -191086643 + AluY SINE Alu 11 158 -153 387 228 110 16 chr2 59601211 59601338 -191086516 - L1MEc LINE L1 -5790 1069 931 404 330 73 17 chr2 59601888 59602176 -191085678 - L1MEc LINE L1 -6544 315 12 385 145 60 0 chr2 59602181 59602264 -191085590 - L1M4 LINE L1 -1733 4413 4326 23 33 0 0 chr2 59603618 59603648 -191084206 + AT_rich Low_complexity Low_complexity 1 30 0 2361 142 34 23 chr2 59604028 59604466 -191083388 + MER65A LTR ERV1 3 445 0 268 273 13 0 chr2 59605803 59605880 -191081974 - MLT1K LTR MaLR -110 478 401 580 313 145 0 chr2 59606889 59607103 -191080751 + MIR SINE MIR 18 262 0 23 0 0 0 chr2 59607743 59607766 -191080088 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 59607795 59607823 -191080031 + AT_rich Low_complexity Low_complexity 1 28 0 9865 121 82 17 chr2 59607832 59609485 -191078369 + Tigger1 DNA MER2_type 658 2417 -1 674 240 59 51 chr2 59609532 59609790 -191078064 + MIR SINE MIR 2 262 0 361 243 126 9 chr2 59609833 59609944 -191077910 - L2 LINE L2 0 3313 3190 21 0 0 0 chr2 59610238 59610259 -191077595 + AT_rich Low_complexity Low_complexity 1 21 0 2068 40 0 12 chr2 59611773 59612024 -191075830 - AluY SINE Alu -63 248 1 363 306 115 64 chr2 59613183 59613634 -191074220 + L1 LINE L1 3283 3756 -2390 309 328 93 52 chr2 59614224 59614760 -191073094 + L1 LINE L1 4500 5057 -1089 3146 237 5 4 chr2 59614869 59615675 -191072179 - L1P LINE L1 -2766 3380 2574 4919 170 30 29 chr2 59615676 59616648 -191071206 + L1P LINE L1 3364 4336 -1810 824 104 7 30 chr2 59616645 59616780 -191071074 - L1PA15 LINE L1 -259 5906 5775 * 4073 93 37 2 chr2 59616796 59617387 -191070467 + L1PA14 LINE L1 5550 6161 0 1606 11 0 0 chr2 59617513 59617689 -191070165 + AluYa5 SINE Alu 131 306 -5 5463 151 7 6 chr2 59617852 59618857 -191068997 - L1PA15 LINE L1 -1 6164 5157 7451 195 7 7 chr2 59618867 59620372 -191067482 - L1PA15 LINE L1 -1368 4778 3274 1567 220 55 39 chr2 59620420 59620927 -191066927 - L1P LINE L1 -3640 2506 1990 21 0 0 0 chr2 59621244 59621265 -191066589 + AT_rich Low_complexity Low_complexity 1 21 0 1275 226 37 37 chr2 59621352 59621648 -191066206 - AluJb SINE Alu -10 302 7 21 0 0 0 chr2 59623026 59623047 -191064807 + AT_rich Low_complexity Low_complexity 1 21 0 452 213 0 19 chr2 59623047 59623064 -191064790 - L1MA9 LINE L1 -33 6279 6263 838 183 60 93 chr2 59623064 59623552 -191064302 - L1ME1 LINE L1 -44 6122 5692 501 170 0 43 chr2 59626142 59626236 -191061618 - FLAM_C SINE Alu -19 124 35 348 262 52 2 chr2 59626420 59626517 -191061337 - MIR3 SINE MIR -30 178 77 589 287 46 87 chr2 59627337 59627797 -191060057 - LTR16A1 LTR ERVL 0 457 17 1489 193 18 11 chr2 59627926 59628241 -191059613 + AluJo SINE Alu 3 319 0 1141 108 43 0 chr2 59628374 59628560 -191059294 - L1MA1 LINE L1 -105 6197 6004 878 357 24 12 chr2 59628752 59629574 -191058280 - HERV16 LTR ERVL -765 4999 4127 614 340 47 14 chr2 59629596 59629875 -191057979 - HERV16 LTR ERVL -4707 289 2 683 337 55 3 chr2 59629876 59630167 -191057687 - LTR16A LTR ERVL 0 450 145 1575 187 16 46 chr2 59630168 59630473 -191057381 + AluJo SINE Alu 1 296 -16 878 195 25 0 chr2 59630473 59630632 -191057222 + AluJb SINE Alu 134 296 -16 476 237 38 8 chr2 59630749 59630880 -191056974 - L1ME4a LINE L1 -28 6093 5959 1979 138 0 7 chr2 59632030 59632327 -191055527 + AluJb SINE Alu 1 295 -17 679 300 36 97 chr2 59633005 59633668 -191054186 + L2 LINE L2 1796 2418 -896 888 241 5 10 chr2 59636252 59636455 -191051399 + MER58A DNA MER1_type 21 222 -2 239 261 65 43 chr2 59636465 59636557 -191051297 + L2 LINE L2 3197 3290 -23 670 256 10 62 chr2 59636588 59636783 -191051071 - MIR SINE MIR -13 249 65 621 252 0 22 chr2 59639092 59639231 -191048623 - MIR SINE MIR -122 140 5 283 233 0 44 chr2 59640378 59640468 -191047386 + (CATATA)n Simple_repeat Simple_repeat 2 87 0 426 236 36 0 chr2 59640468 59640633 -191047221 + (TA)n Simple_repeat Simple_repeat 2 172 0 1547 216 24 55 chr2 59640633 59641092 -191046762 - L1MA9 LINE L1 -74 6238 5794 1834 189 14 14 chr2 59641433 59641798 -191046056 - MLT1A1 LTR MaLR 0 365 1 313 360 26 0 chr2 59642507 59642621 -191045233 - MIR SINE MIR -61 147 31 258 325 156 37 chr2 59642673 59642968 -191044886 + L3b LINE CR1 1138 1467 -116 231 88 0 0 chr2 59642968 59643002 -191044852 + (TG)n Simple_repeat Simple_repeat 2 35 0 2354 99 0 13 chr2 59643114 59643426 -191044428 + AluSg SINE Alu 1 308 -2 235 322 0 0 chr2 59643665 59643724 -191044130 + L2 LINE L2 3252 3310 -3 985 115 66 16 chr2 59644837 59645020 -191042834 - L1MA8 LINE L1 -44 6247 6056 202 274 27 27 chr2 59645084 59645157 -191042697 - L2 LINE L2 -79 3234 3162 295 260 21 0 chr2 59645229 59645325 -191042529 + (TA)n Simple_repeat Simple_repeat 1 98 0 200 366 78 7 chr2 59645352 59645505 -191042349 - L2 LINE L2 -255 3017 2854 452 265 72 24 chr2 59646447 59646613 -191041241 - L2 LINE L2 0 3313 3140 216 0 0 0 chr2 59647048 59647072 -191040782 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 2121 153 42 6 chr2 59647073 59647426 -191040428 - MSTB LTR MaLR -60 366 1 202 365 26 9 chr2 59647426 59647541 -191040313 - L2 LINE L2 -337 2977 2861 509 250 158 25 chr2 59647565 59647761 -191040093 - L2 LINE L2 -823 2491 2270 248 162 0 0 chr2 59647785 59647822 -191040032 + MER3 DNA MER1_type 46 82 -127 239 290 0 0 chr2 59647917 59647979 -191039875 - MER3 DNA MER1_type -147 62 1 405 287 92 23 chr2 59647979 59648153 -191039701 - L2 LINE L2 -1092 2222 2037 263 299 37 0 chr2 59648171 59648278 -191039576 - MIR SINE MIR -71 191 81 579 295 68 11 chr2 59648708 59648898 -191038956 - LTR16C LTR ERVL 0 491 291 383 372 36 18 chr2 59649334 59649557 -191038297 + MIR SINE MIR 30 256 -6 24 53 0 0 chr2 59650687 59650725 -191037129 + AT_rich Low_complexity Low_complexity 1 38 0 1286 251 76 5 chr2 59650823 59651217 -191036637 + L1MC4a LINE L1 5254 5675 -2133 331 231 9 9 chr2 59651248 59651356 -191036498 - L1MC4a LINE L1 -1588 6220 6113 2733 248 42 11 chr2 59651380 59651888 -191035966 + L1MC4a LINE L1 6023 6564 -1244 1791 252 35 25 chr2 59651888 59652455 -191035399 - MER90 LTR ERV1 0 575 3 2733 248 42 11 chr2 59652455 59652708 -191035146 + L1MC4a LINE L1 6564 6808 -1000 1068 149 116 58 chr2 59652708 59652949 -191034905 - MER66B LTR ERV1 0 486 232 666 274 0 13 chr2 59652972 59653129 -191034725 - MLT1D LTR MaLR -105 400 246 363 65 0 0 chr2 59653145 59653191 -191034663 - MLT2B1 LTR ERVL 0 520 475 8262 203 55 18 chr2 59653191 59654893 -191032961 - ERVL-B2 LTR ERVL -3999 1765 2 978 173 0 56 chr2 59654894 59655086 -191032768 - MLT2B2 LTR ERVL 0 515 335 909 192 44 122 chr2 59655086 59655429 -191032425 + LTR39 LTR ERV1 1 316 -467 737 247 33 16 chr2 59655495 59655677 -191032177 + LTR39 LTR ERV1 599 783 0 889 235 0 17 chr2 59655677 59655856 -191031998 - MLT2B3 LTR ERVL -217 337 162 787 205 13 7 chr2 59655867 59656018 -191031836 - MLT1D LTR MaLR -353 152 1 256 228 44 15 chr2 59656019 59656155 -191031699 + L1MEc LINE L1 2047 2186 -4210 515 304 30 7 chr2 59656266 59656562 -191031292 + L1MEc LINE L1 3263 3565 -2650 1422 195 3 50 chr2 59656773 59657091 -191030763 - AluJo SINE Alu -7 305 3 884 258 76 84 chr2 59657146 59657801 -191030053 + L1MC5 LINE L1 6625 7274 -687 1104 231 32 101 chr2 59657826 59658233 -191029621 - MLT1B LTR MaLR -11 379 1 503 147 237 20 chr2 59658264 59658462 -191029392 + L1MC5 LINE L1 7321 7561 -400 243 372 145 23 chr2 59658850 59659169 -191028685 + L2 LINE L2 2712 3060 -212 31 0 0 0 chr2 59659731 59659762 -191028092 + AT_rich Low_complexity Low_complexity 1 31 0 4851 103 8 3 chr2 59660356 59661062 -191026792 + L1PA13 LINE L1 5454 6163 0 812 41 0 0 chr2 59661810 59661907 -191025947 + L1PA5 LINE L1 6050 6146 -8 2480 159 7 19 chr2 59662176 59662609 -191025245 - MSTC LTR MaLR 0 428 1 646 167 68 61 chr2 59662701 59662870 -191024984 - FLAM_A SINE Alu 0 170 1 254 346 118 7 chr2 59664076 59664212 -191023642 - L2 LINE L2 -12 3260 3110 224 266 35 97 chr2 59664488 59664601 -191023253 - MIR SINE MIR -129 133 28 24 32 0 0 chr2 59665855 59665886 -191021968 + AT_rich Low_complexity Low_complexity 1 31 0 500 87 0 0 chr2 59667108 59667177 -191020677 - L1P LINE L1 -1460 4686 4618 5857 37 1 0 chr2 59667177 59667876 -191019978 + L1PA4 LINE L1 5442 6142 -13 24 0 0 0 chr2 59667876 59667900 -191019954 + AT_rich Low_complexity Low_complexity 1 24 0 211 356 87 10 chr2 59667920 59668024 -191019830 - MIR SINE MIR -77 131 20 536 288 146 34 chr2 59668450 59668951 -191018903 - L2 LINE L2 -186 3127 2567 2339 113 3 47 chr2 59670043 59670424 -191017430 - THE1B LTR MaLR 0 364 1 333 275 12 0 chr2 59670428 59670508 -191017346 + MIR SINE MIR 15 95 -167 1266 216 12 97 chr2 59670511 59670914 -191016940 + MLT1A2 LTR MaLR 1 369 -5 404 254 44 9 chr2 59670920 59671034 -191016820 + MIR SINE MIR 96 213 -49 23 33 0 0 chr2 59672330 59672360 -191015494 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr2 59672408 59672443 -191015411 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 59672484 59672505 -191015349 + AT_rich Low_complexity Low_complexity 1 21 0 43280 46 2 1 chr2 59672505 59678653 -191009201 - L1PA3 LINE L1 -1 6154 3 302 169 12 12 chr2 59679110 59679193 -191008661 + Zaphod DNA AcHobo 907 989 -3042 1085 198 18 4 chr2 59679249 59679476 -191008378 + Zaphod DNA AcHobo 3801 4030 -1 1148 196 68 68 chr2 59680105 59680273 -191007581 - AluJb SINE Alu -16 296 126 2090 158 5 32 chr2 59680273 59680647 -191007207 - THE1B LTR MaLR 0 364 1 1148 196 68 68 chr2 59680647 59680774 -191007080 - AluJb SINE Alu -185 127 1 309 312 132 19 chr2 59680873 59681184 -191006670 - L1ME4a LINE L1 -159 5962 5617 230 341 22 11 chr2 59681461 59681552 -191006302 - L2 LINE L2 -8 3264 3173 328 320 7 70 chr2 59681768 59681962 -191005892 - HAL1 LINE L1 -30 2477 2305 415 32 16 0 chr2 59681962 59682024 -191005830 - L1MA3 LINE L1 0 6305 6243 328 320 7 70 chr2 59682024 59682113 -191005741 - HAL1 LINE L1 -202 2305 2212 1083 212 24 0 chr2 59682197 59682409 -191005445 - MER20 DNA MER1_type 0 219 3 1419 134 24 40 chr2 59682504 59682751 -191005103 - AluSx SINE Alu -69 243 1 262 293 251 0 chr2 59682834 59683001 -191004853 - HAL1 LINE L1 -547 1960 1752 437 313 54 40 chr2 59683004 59683282 -191004572 - MLT1J LTR MaLR 0 511 230 2106 112 0 13 chr2 59683351 59683656 -191004198 + AluSg1 SINE Alu 4 304 -5 45 19 0 0 chr2 59683887 59683939 -191003915 + AT_rich Low_complexity Low_complexity 1 52 0 2039 276 71 74 chr2 59683944 59685439 -191002415 - HAL1 LINE L1 -862 1645 155 23 0 0 0 chr2 59687379 59687402 -191000452 + AT_rich Low_complexity Low_complexity 1 23 0 29 60 0 0 chr2 59687444 59687494 -191000360 + AT_rich Low_complexity Low_complexity 1 50 0 284 339 43 9 chr2 59689536 59689651 -190998203 + MIR SINE MIR 2 120 -142 1417 72 110 10 chr2 59690099 59690308 -190997546 + MER30 DNA MER1_type 1 230 0 361 284 65 75 chr2 59690509 59690710 -190997144 + MIR SINE MIR 57 255 -7 548 270 46 46 chr2 59690748 59690944 -190996910 - MIR SINE MIR -4 258 63 206 373 138 12 chr2 59692178 59692425 -190995429 + L2 LINE L2 1399 1676 -1638 * 1044 301 150 31 chr2 59692423 59693173 -190994681 - L2 LINE L2 0 3313 2457 781 317 92 28 chr2 59693199 59693798 -190994056 + L1MCc LINE L1 28 664 -5759 22 56 0 0 chr2 59693813 59693849 -190994005 + AT_rich Low_complexity Low_complexity 1 36 0 415 277 39 8 chr2 59693861 59693991 -190993863 - L2 LINE L2 -864 2450 2317 255 333 0 0 chr2 59694387 59694465 -190993389 + MIR SINE MIR 182 259 -3 223 366 52 30 chr2 59695219 59695353 -190992501 + L2 LINE L2 3136 3272 0 2137 165 69 22 chr2 59695458 59695865 -190991989 + MSTB LTR MaLR 1 426 0 442 362 33 16 chr2 59696600 59696843 -190991011 - MIR SINE MIR -4 258 12 227 226 32 0 chr2 59696980 59697042 -190990812 + L1MA4A LINE L1 408 471 -6738 * 515 301 63 38 chr2 59697018 59697257 -190990597 + L1MA4A LINE L1 917 1161 -6048 3698 190 14 14 chr2 59697263 59698063 -190989791 - L1M2 LINE L1 -4610 2239 1440 * 12256 195 29 26 chr2 59698059 59698188 -190989666 + L1MA4A LINE L1 3453 3580 -3785 1649 159 37 0 chr2 59698188 59698459 -190989395 + AluSq SINE Alu 2 282 -31 12256 195 29 26 chr2 59698459 59702237 -190985617 + L1MA4A LINE L1 3580 7361 -4 25 0 0 0 chr2 59703836 59703861 -190983993 + AT_rich Low_complexity Low_complexity 1 25 0 2479 272 54 44 chr2 59705717 59705841 -190982013 + L2 LINE L2 2067 2188 -1125 1552 120 22 0 chr2 59705841 59706066 -190981788 + MER30 DNA MER1_type 1 230 0 2479 272 54 44 chr2 59706066 59707025 -190980829 + L2 LINE L2 2188 3147 -166 479 188 0 9 chr2 59707289 59707401 -190980453 + L1MA7 LINE L1 5257 5367 -924 * 5312 149 22 35 chr2 59707377 59708231 -190979623 + L1MA7 LINE L1 5286 6125 -166 721 193 0 0 chr2 59708231 59708350 -190979504 + FLAM_A SINE Alu 5 123 -10 5312 149 22 35 chr2 59708350 59708513 -190979341 + L1MA7 LINE L1 6125 6289 -2 1093 179 190 49 chr2 59710183 59710254 -190977600 - MER69 DNA AcHobo 0 2526 2466 2169 100 19 13 chr2 59710254 59710563 -190977291 + AluY SINE Alu 1 311 0 1093 179 190 49 chr2 59710563 59710944 -190976910 - MER69 DNA AcHobo -60 2466 2010 * 1800 250 89 13 chr2 59710942 59711273 -190976581 - MER69 DNA AcHobo -658 568 181 252 0 0 0 chr2 59711273 59711301 -190976553 + (TG)n Simple_repeat Simple_repeat 2 29 0 1800 250 89 13 chr2 59711301 59711497 -190976357 - MER69 DNA AcHobo -1045 181 1 675 269 39 14 chr2 59712845 59713053 -190974801 - MIR SINE MIR -17 245 33 494 325 58 105 chr2 59714045 59714596 -190973258 + HAL1 LINE L1 38 562 -1945 1459 279 153 25 chr2 59714778 59715626 -190972228 + HAL1 LINE L1 808 1841 -666 198 0 0 0 chr2 59715626 59715648 -190972206 + (TA)n Simple_repeat Simple_repeat 2 23 0 1459 279 153 25 chr2 59715648 59715946 -190971908 + HAL1 LINE L1 1841 2100 -407 239 150 0 0 chr2 59716174 59716214 -190971640 - MLT2C1 LTR ERVL -8 389 350 2310 176 44 7 chr2 59716245 59716654 -190971200 - MLT2C2 LTR ERVL -40 424 1 1436 210 3 85 chr2 59716673 59717049 -190970805 - MLT1A2 LTR MaLR 0 374 30 2045 152 33 28 chr2 59718308 59718670 -190969184 + THE1B LTR MaLR 1 364 0 492 73 24 0 chr2 59718679 59718761 -190969093 - L1PA13 LINE L1 -3 6160 6077 216 369 54 18 chr2 59719370 59719481 -190968373 - MIR3 SINE MIR -9 199 85 223 333 20 20 chr2 59719586 59719685 -190968169 - L2 LINE L2 0 3272 3174 2171 114 3 0 chr2 59720500 59720806 -190967048 - AluSx SINE Alu 0 312 6 983 151 28 104 chr2 59721196 59721447 -190966407 - L1MB8 LINE L1 -12 6166 5935 * 1797 176 42 48 chr2 59721438 59721871 -190965983 - L1MA6 LINE L1 -211 6089 5660 3480 217 97 31 chr2 59722882 59724441 -190963413 - L1ME2 LINE L1 -10 6223 4467 2156 95 0 3 chr2 59724441 59724748 -190963106 - AluSx SINE Alu 0 306 1 3480 217 97 31 chr2 59724748 59725452 -190962402 - L1ME2 LINE L1 -1766 4467 3811 2526 265 104 55 chr2 59725564 59726314 -190961540 - L1ME2 LINE L1 -2702 3513 2801 2242 114 0 0 chr2 59726314 59726611 -190961243 - AluSq SINE Alu -16 297 1 2526 265 104 55 chr2 59726611 59727028 -190960826 - L1ME2 LINE L1 -3414 2801 2406 2113 143 0 6 chr2 59727028 59727342 -190960512 - AluSx SINE Alu 0 312 1 2526 265 104 55 chr2 59727342 59729521 -190958333 - L1ME2 LINE L1 -3809 2406 36 236 316 76 58 chr2 59731297 59731588 -190956266 - L2 LINE L2 -170 3102 2807 498 218 32 77 chr2 59732798 59732954 -190954900 + MER103 DNA DNA 18 166 0 604 322 118 41 chr2 59733217 59733897 -190953957 - L2 LINE L2 -2 3311 2574 2364 85 0 3 chr2 59734016 59734321 -190953533 - AluY SINE Alu -7 304 1 6286 83 36 2 chr2 59735200 59736397 -190951457 + L1PA10 LINE L1 4925 6166 -2 380 301 61 37 chr2 59743277 59743440 -190944414 + MER5A DNA MER1_type 1 167 -22 1795 92 73 0 chr2 59743642 59743903 -190943951 + L1PA8 LINE L1 5888 6167 -5 2226 115 0 3 chr2 59743912 59744225 -190943629 + AluSx SINE Alu 1 312 0 357 345 42 0 chr2 59745278 59745397 -190942457 + L2 LINE L2 3149 3272 0 956 102 0 0 chr2 59746705 59746832 -190941022 + AluSq/x SINE Alu 1 127 -186 301 70 35 0 chr2 59746836 59746893 -190940961 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 1156 133 0 0 chr2 59746896 59747054 -190940800 + AluSg/x SINE Alu 138 295 -17 891 191 42 16 chr2 59747223 59747412 -190940442 - MIR SINE MIR -58 204 11 318 274 19 38 chr2 59747929 59748035 -190939819 - L2 LINE L2 -1 3271 3168 2175 111 7 0 chr2 59748077 59748366 -190939488 - AluSq SINE Alu -22 291 1 343 318 48 24 chr2 59748674 59748800 -190939054 - L2 LINE L2 -11 3261 3133 503 306 123 5 chr2 59749511 59749730 -190938124 - MIR SINE MIR -12 250 6 279 333 76 28 chr2 59750400 59750466 -190937388 + MIR SINE MIR 32 93 -169 198 0 0 0 chr2 59750466 59750488 -190937366 + (CAA)n Simple_repeat Simple_repeat 2 23 0 279 333 76 28 chr2 59750488 59750565 -190937289 + MIR SINE MIR 93 182 -80 1147 29 0 0 chr2 59753409 59753547 -190934307 - L1PA4 LINE L1 -3 6152 6015 430 306 53 12 chr2 59753568 59753738 -190934116 - MIR SINE MIR -3 259 83 258 254 34 0 chr2 59753845 59753904 -190933950 + MER5A DNA MER1_type 123 183 -6 216 204 23 0 chr2 59755298 59755342 -190932512 + L2 LINE L2 3220 3264 -8 460 281 13 59 chr2 59756209 59756362 -190931492 + MIR3 SINE MIR 16 161 -47 289 215 132 56 chr2 59756417 59756561 -190931293 - MER103 DNA DNA -9 157 3 203 352 0 14 chr2 59757379 59757450 -190930404 - L2 LINE L2 0 3313 3244 200 171 24 24 chr2 59758670 59758711 -190929143 + L2 LINE L2 3229 3269 -3 392 318 59 24 chr2 59760235 59760405 -190927449 + L2 LINE L2 2885 3060 -253 869 242 52 0 chr2 59761092 59761303 -190926551 - MIR SINE MIR -29 233 12 21144 53 0 0 chr2 59761785 59765245 -190922609 + L1PA5 LINE L1 2697 6154 0 25 0 0 0 chr2 59766482 59766507 -190921347 + AT_rich Low_complexity Low_complexity 1 25 0 491 220 65 48 chr2 59768136 59768304 -190919550 + MIR SINE MIR 81 251 -11 189 0 0 0 chr2 59769770 59769791 -190918063 + (A)n Simple_repeat Simple_repeat 1 21 0 724 276 93 9 chr2 59769831 59770056 -190917798 - MIR SINE MIR -10 252 9 891 364 58 36 chr2 59770340 59771168 -190916686 + L2 LINE L2 2131 2976 -338 289 269 193 25 chr2 59771267 59771386 -190916468 + L2 LINE L2 3165 3303 -10 324 0 0 0 chr2 59771884 59771920 -190915934 + (T)n Simple_repeat Simple_repeat 1 36 0 213 182 0 0 chr2 59772439 59772472 -190915382 + polypyrimidine Low_complexity Low_complexity 2 34 0 3226 147 7 21 chr2 59772688 59773352 -190914502 + L1PB4 LINE L1 5520 6165 -3 788 150 0 0 chr2 59773353 59773480 -190914374 + L1PB4 LINE L1 6026 6152 -4 1427 208 145 0 chr2 59774212 59774529 -190913325 - MLT1A1 LTR MaLR -2 363 1 316 213 9 9 chr2 59774543 59774651 -190913203 + CT-rich Low_complexity Low_complexity 2 109 0 1161 265 102 53 chr2 59774933 59775727 -190912127 - L2 LINE L2 -38 3275 2444 700 304 100 26 chr2 59775909 59776258 -190911596 + L2 LINE L2 2929 3303 -10 346 324 19 0 chr2 59776572 59776677 -190911177 - L3 LINE CR1 -103 1474 1368 1105 228 88 35 chr2 59777352 59777543 -190910311 - MLT1A1 LTR MaLR 0 365 147 2177 115 0 0 chr2 59777543 59777838 -190910016 - AluSg SINE Alu -15 295 1 1105 228 88 35 chr2 59777838 59777988 -190909866 - MLT1A1 LTR MaLR -218 147 6 1913 143 3 3 chr2 59778083 59778392 -190909462 - AluSq SINE Alu 0 309 1 197 221 0 208 chr2 59778974 59779051 -190908803 + MIR3 SINE MIR 112 172 -36 2341 81 0 0 chr2 59779720 59780016 -190907838 - AluSg SINE Alu -9 301 6 183 80 0 0 chr2 59780533 59780558 -190907296 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 21 0 0 0 chr2 59780572 59780593 -190907261 + AT_rich Low_complexity Low_complexity 1 21 0 256 255 85 72 chr2 59780603 59780756 -190907098 - MLT1J2 LTR MaLR -2 448 294 343 172 16 0 chr2 59781076 59781140 -190906714 + L2 LINE L2 3248 3312 -1 3670 160 50 34 chr2 59782395 59782532 -190905322 - MER50 LTR ERV1 -23 711 578 2464 79 0 0 chr2 59782532 59782837 -190905017 + AluSp SINE Alu 1 305 -8 3670 160 50 34 chr2 59782837 59783399 -190904455 - MER50 LTR ERV1 -156 578 1 225 215 93 65 chr2 59784500 59784607 -190903247 - L1M4 LINE L1 -837 5309 5200 1086 114 34 11 chr2 59786004 59786180 -190901674 - Tigger7 DNA MER2_type 0 2487 2308 1426 178 112 0 chr2 59786197 59786455 -190901399 - Tigger7 DNA MER2_type -2168 319 33 429 187 122 14 chr2 59787174 59787313 -190900541 - MER104 DNA Tc2 -1 179 26 22 0 0 0 chr2 59788145 59788167 -190899687 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr2 59788877 59788904 -190898950 + AT_rich Low_complexity Low_complexity 1 27 0 255 304 125 18 chr2 59789094 59789262 -190898592 - MIR3 SINE MIR -4 204 19 919 103 0 7 chr2 59792093 59792229 -190895625 - AluSg/x SINE Alu 0 312 178 1352 92 0 0 chr2 59792229 59792393 -190895461 + AluSq SINE Alu 3 166 -147 239 241 0 17 chr2 59792704 59792762 -190895092 - L1ME LINE L1 -322 5799 5743 7796 18 0 0 chr2 59792793 59793995 -190893859 - L1PA3 LINE L1 -3 6152 4950 2053 119 17 0 chr2 59794290 59794583 -190893271 - AluSx SINE Alu -13 299 2 305 407 26 0 chr2 59794706 59794900 -190892954 + MIR3 SINE MIR 3 201 -7 1604 120 54 31 chr2 59798433 59798691 -190889163 + AluSx SINE Alu 44 307 -5 2167 98 0 33 chr2 59798726 59799033 -190888821 + AluY SINE Alu 1 297 -14 907 221 26 49 chr2 59800434 59800660 -190887194 - MER58A DNA MER1_type -3 221 1 2075 101 0 60 chr2 59800710 59801027 -190886827 - AluSq SINE Alu 0 313 16 260 185 0 0 chr2 59802035 59802089 -190885765 + L1MA7 LINE L1 6238 6291 0 2424 67 0 3 chr2 59802910 59803209 -190884645 + AluY SINE Alu 1 298 -13 1171 272 110 106 chr2 59803284 59804520 -190883334 - L2 LINE L2 -16 3297 2061 2013 102 3 84 chr2 59804528 59804861 -190882993 - AluSx SINE Alu -6 306 1 210 387 16 8 chr2 59806568 59806692 -190881162 + L2 LINE L2 2374 2498 -816 5564 145 30 9 chr2 59807570 59808583 -190879271 - L1MA8 LINE L1 -2 6289 5256 1038 169 24 34 chr2 59809440 59809647 -190878207 - MER20 DNA MER1_type 0 219 15 803 291 32 16 chr2 59809747 59809994 -190877860 - MIR SINE MIR -4 258 8 183 273 55 0 chr2 59810264 59810319 -190877535 + L3 LINE CR1 1511 1568 -9 305 159 0 14 chr2 59810729 59810798 -190877056 + (TA)n Simple_repeat Simple_repeat 2 69 0 26 50 0 0 chr2 59812485 59812525 -190875329 + AT_rich Low_complexity Low_complexity 1 40 0 34 0 0 0 chr2 59813436 59813470 -190874384 + AT_rich Low_complexity Low_complexity 1 34 0 1656 180 0 0 chr2 59816465 59816737 -190871117 + AluJo SINE Alu 1 272 -40 21 36 0 0 chr2 59818301 59818329 -190869525 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr2 59818565 59818597 -190869257 + AT_rich Low_complexity Low_complexity 1 32 0 2041 88 0 4 chr2 59819581 59819842 -190868012 + AluSg SINE Alu 37 296 -14 1003 172 0 0 chr2 59822352 59822509 -190865345 + FRAM SINE Alu 1 157 -9 219 36 0 0 chr2 59822563 59822591 -190865263 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 242 362 48 0 chr2 59823465 59823570 -190864284 - MIR SINE MIR -57 151 42 591 251 80 25 chr2 59825776 59825939 -190861915 + MER5B DNA MER1_type 6 177 -1 21 0 0 0 chr2 59828345 59828366 -190859488 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr2 59828392 59828447 -190859407 + AT_rich Low_complexity Low_complexity 1 55 0 402 205 0 0 chr2 59829476 59829554 -190858300 + MER116 DNA Mariner 1 78 -2 231 280 103 57 chr2 59829659 59829834 -190858020 + MIR SINE MIR 3 185 -77 199 169 68 68 chr2 59830199 59830258 -190857596 + L3b LINE CR1 1294 1352 -231 231 154 0 39 chr2 59830703 59830755 -190857099 + CT-rich Low_complexity Low_complexity 2 51 0 2392 92 8 27 chr2 59830802 59831170 -190856684 - L1PB1 LINE L1 0 6151 5791 605 180 0 25 chr2 59831214 59831336 -190856518 - MER66B LTR ERV1 -294 192 74 737 110 0 9 chr2 59831339 59831448 -190856406 + L1PB2 LINE L1 5777 5884 -267 414 0 0 0 chr2 59831456 59831502 -190856352 + (TA)n Simple_repeat Simple_repeat 2 47 0 1740 166 38 93 chr2 59831502 59831945 -190855909 - MER66B LTR ERV1 -66 420 1 258 220 0 0 chr2 59833053 59833112 -190854742 + (TATATG)n Simple_repeat Simple_repeat 5 63 0 218 271 144 51 chr2 59834302 59834420 -190853434 - L2 LINE L2 -1 3312 3184 501 261 158 5 chr2 59834502 59834717 -190853137 - LTR16A1 LTR ERVL 0 457 210 468 233 47 20 chr2 59835342 59835492 -190852362 - L1M4 LINE L1 -2174 3972 3819 605 238 51 31 chr2 59835592 59835848 -190852006 - L1M4 LINE L1 -3710 2436 2176 9355 216 34 16 chr2 59835908 59838547 -190849307 - L1MC1 LINE L1 -18 6595 4004 2192 137 8 39 chr2 59838547 59838934 -190848920 + THE1C LTR MaLR 1 375 0 9355 216 34 16 chr2 59838934 59839149 -190848705 - L1MC1 LINE L1 -2609 4004 3794 1004 25 0 0 chr2 59839149 59839268 -190848586 + L1PA2 LINE L1 6037 6155 0 9355 216 34 16 chr2 59839268 59840107 -190847747 - L1MC1 LINE L1 -2819 3794 2841 305 193 174 0 chr2 59840110 59840219 -190847635 - L1MC1 LINE L1 -3843 2583 2456 9751 166 86 55 chr2 59840220 59840451 -190847403 - L1MC1 LINE L1 -4031 2395 2173 2036 113 21 12 chr2 59840451 59840779 -190847075 - L1MA2 LINE L1 0 6304 5974 9751 166 86 55 chr2 59840779 59842871 -190844983 - L1MC1 LINE L1 -4253 2173 1 1875 260 36 40 chr2 59842925 59843751 -190844103 + L2 LINE L2 2414 3239 -74 301 298 12 0 chr2 59844227 59844311 -190843543 + L2 LINE L2 3229 3313 0 227 104 62 0 chr2 59844439 59844487 -190843367 + A-rich Low_complexity Low_complexity 1 51 0 25 31 0 0 chr2 59845364 59845396 -190842458 + AT_rich Low_complexity Low_complexity 1 32 0 295 289 191 13 chr2 59846266 59846418 -190841436 + MIR SINE MIR 34 212 -50 2226 154 5 24 chr2 59846433 59846804 -190841050 + THE1B LTR MaLR 1 364 0 27 29 0 0 chr2 59847140 59847174 -190840680 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 59847205 59847233 -190840621 + AT_rich Low_complexity Low_complexity 1 28 0 24 54 0 18 chr2 59847559 59847584 -190840270 + AT_rich Low_complexity Low_complexity 1 25 -30 931 18 0 0 chr2 59847584 59847693 -190840161 + L1PA4 LINE L1 6044 6152 -3 24 54 0 18 chr2 59847693 59847723 -190840131 + AT_rich Low_complexity Low_complexity 25 55 0 23 0 0 0 chr2 59847845 59847868 -190839986 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr2 59849689 59849710 -190838144 + (TG)n Simple_repeat Simple_repeat 2 22 0 354 331 129 6 chr2 59849780 59849943 -190837911 - MER5A DNA MER1_type 0 189 7 210 37 0 0 chr2 59850031 59850058 -190837796 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 237 333 12 0 chr2 59850318 59850399 -190837455 + MIR3 SINE MIR 115 196 -12 556 330 24 5 chr2 59850729 59850938 -190836916 + MIR SINE MIR 1 213 -49 578 274 34 23 chr2 59851017 59851192 -190836662 + MER5B DNA MER1_type 2 178 0 6790 139 46 18 chr2 59851939 59853136 -190834718 - Tigger3b DNA MER2_type 0 1231 1 2064 167 46 23 chr2 59853675 59854106 -190833748 + L1PB4 LINE L1 5713 6153 -3 258 271 168 64 chr2 59854119 59854322 -190833532 + MLT1K LTR MaLR 335 558 -30 858 198 86 0 chr2 59855072 59855269 -190832585 + MER20 DNA MER1_type 2 215 -4 213 300 0 0 chr2 59855673 59855743 -190832111 + (TA)n Simple_repeat Simple_repeat 2 71 0 7196 196 52 29 chr2 59855914 59856717 -190831137 - L1MB7 LINE L1 -19 6401 5617 1772 140 35 0 chr2 59856717 59857002 -190830852 - AluSx SINE Alu -17 295 1 7196 196 52 29 chr2 59857002 59857380 -190830474 - L1MB7 LINE L1 -803 5617 5249 279 0 0 0 chr2 59857380 59857411 -190830443 + (TG)n Simple_repeat Simple_repeat 2 32 0 7196 196 52 29 chr2 59857411 59858979 -190828875 - L1MB7 LINE L1 -1171 5249 3578 851 240 134 70 chr2 59858952 59859406 -190828448 - L1MB7 LINE L1 -4774 1610 1128 * 508 250 77 38 chr2 59859853 59860519 -190827335 + L1MC5 LINE L1 7027 7547 -414 778 301 68 55 chr2 59860599 59861102 -190826752 - MLT1H LTR MaLR -8 541 1 4882 124 41 42 chr2 59861711 59862541 -190825313 - L1PA16 LINE L1 -1 6165 5332 2050 138 3 6 chr2 59862541 59862853 -190825001 - AluSx SINE Alu -1 311 1 4882 124 41 42 chr2 59862853 59862953 -190824901 - L1PA16 LINE L1 -834 5332 5233 38098 70 6 6 chr2 59862996 59869164 -190818690 + L1PA4 LINE L1 3 6173 0 318 336 104 0 chr2 59869341 59869475 -190818379 - MIR SINE MIR -23 239 92 245 344 92 15 chr2 59870294 59870425 -190817429 - MIR3 SINE MIR -66 142 2 2098 131 3 16 chr2 59870440 59870754 -190817100 - AluSp SINE Alu -3 310 1 226 279 213 0 chr2 59871318 59871454 -190816400 + MIR SINE MIR 68 232 -30 232 390 0 0 chr2 59871788 59871870 -190815984 - L2 LINE L2 -2 3270 3189 1027 251 258 16 chr2 59871872 59872307 -190815547 + MLT1H LTR MaLR 7 546 -3 480 300 62 31 chr2 59873236 59873463 -190814391 - MIR SINE MIR -23 239 6 339 342 94 7 chr2 59873460 59873609 -190814245 + L2 LINE L2 2720 2881 -433 * 307 307 71 0 chr2 59873843 59873970 -190813884 - MIR SINE MIR -74 188 53 10429 157 16 20 chr2 59874057 59876506 -190811348 - L1MA3 LINE L1 -5 7719 5263 2260 121 0 6 chr2 59876506 59876820 -190811034 - AluSq SINE Alu 0 313 2 10429 157 16 20 chr2 59876820 59877236 -190810618 - L1MA3 LINE L1 -2461 5263 4865 2409 93 0 3 chr2 59877236 59877547 -190810307 - AluY SINE Alu -1 310 1 10429 157 16 20 chr2 59877547 59877964 -190809890 - L1MA3 LINE L1 -2859 4865 4448 7429 20 1 0 chr2 59877965 59878865 -190808989 - L1PA2 LINE L1 -1 6154 5254 17053 154 65 52 chr2 59878866 59880919 -190806935 - L1MA3 LINE L1 -3108 4457 2432 2038 157 120 5 chr2 59880919 59881302 -190806552 - MSTA LTR MaLR -1 427 1 17053 154 65 52 chr2 59881302 59883631 -190804223 - L1MA3 LINE L1 -5133 2432 12 1713 167 54 10 chr2 59883725 59884019 -190803835 - AluJb SINE Alu -2 310 4 2686 178 27 0 chr2 59884290 59884817 -190803037 - L1MA5 LINE L1 0 6300 5760 362 153 0 0 chr2 59884818 59884877 -190802977 + L1MA5 LINE L1 5711 5769 -531 380 347 30 18 chr2 59884888 59885055 -190802799 - MIR SINE MIR -74 188 20 246 32 0 0 chr2 59885149 59885174 -190802680 + (CA)n Simple_repeat Simple_repeat 1 56 0 246 32 0 0 chr2 59885174 59885205 -190802649 + (CA)n Simple_repeat Simple_repeat 2 32 0 951 179 43 149 chr2 59885392 59885767 -190802087 - MER58B DNA MER1_type -4 337 3 22 0 0 0 chr2 59885961 59885983 -190801871 + AT_rich Low_complexity Low_complexity 1 22 0 299 257 11 126 chr2 59887110 59887285 -190800569 + MIR SINE MIR 94 248 -14 264 100 0 0 chr2 59887290 59887330 -190800524 + (TTA)n Simple_repeat Simple_repeat 1 40 0 29 0 0 0 chr2 59887961 59887990 -190799864 + AT_rich Low_complexity Low_complexity 1 29 0 563 330 80 21 chr2 59888215 59888690 -190799164 - L1ME4a LINE L1 -268 5853 5351 22 35 0 0 chr2 59888796 59888825 -190799029 + AT_rich Low_complexity Low_complexity 1 29 0 2062 236 31 57 chr2 59889784 59890399 -190797455 + MLT1E2 LTR MaLR 18 616 -10 255 330 0 0 chr2 59890507 59890598 -190797256 - MIR SINE MIR -68 140 50 258 81 0 0 chr2 59892027 59892064 -190795790 + (T)n Simple_repeat Simple_repeat 1 37 0 1954 179 76 18 chr2 59892505 59892951 -190794903 + MER67D LTR ERV1 15 486 -28 416 301 77 59 chr2 59893829 59894101 -190793753 + LTR33 LTR ERVL 1 277 -244 1924 139 4 4 chr2 59895104 59895405 -190792449 - AluSx SINE Alu 0 301 1 999 153 6 0 chr2 59895504 59895697 -190792157 + AluSg/x SINE Alu 119 312 0 196 300 50 12 chr2 59897102 59897182 -190790672 + MIR SINE MIR 111 193 -69 228 67 0 0 chr2 59897514 59897544 -190790310 + (A)n Simple_repeat Simple_repeat 1 30 0 21 0 0 0 chr2 59898369 59898390 -190789464 + AT_rich Low_complexity Low_complexity 1 21 0 196 361 31 21 chr2 59898894 59898991 -190788863 + MIR SINE MIR 8 105 -157 247 324 44 15 chr2 59899484 59899620 -190788234 - MIR SINE MIR -3 259 120 419 35 18 0 chr2 59900081 59900138 -190787716 + (CA)n Simple_repeat Simple_repeat 1 58 0 2069 151 0 0 chr2 59900399 59900691 -190787163 + AluSx SINE Alu 1 292 -20 192 238 79 32 chr2 59900915 59900978 -190786876 + MIR SINE MIR 63 128 -134 341 315 16 22 chr2 59900990 59901160 -190786694 + MIR SINE MIR 20 191 -71 252 297 36 7 chr2 59901177 59901315 -190786539 + (TATATG)n Simple_repeat Simple_repeat 4 145 0 199 50 75 0 chr2 59901841 59901881 -190785973 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 217 299 0 15 chr2 59901959 59902026 -190785828 + CT-rich Low_complexity Low_complexity 1 66 0 369 0 0 0 chr2 59902149 59902190 -190785664 + (CA)n Simple_repeat Simple_repeat 2 42 0 245 363 32 24 chr2 59903578 59903702 -190784152 - MIR SINE MIR -118 144 20 552 248 181 9 chr2 59905021 59905231 -190782623 + MIR SINE MIR 17 262 0 319 217 224 35 chr2 59905243 59905386 -190782468 - L1ME4a LINE L1 -92 6029 5860 462 319 52 26 chr2 59905413 59905645 -190782209 + MIR SINE MIR 19 256 -6 1759 95 0 4 chr2 59905904 59906135 -190781719 - AluSx SINE Alu -78 234 5 1093 199 83 8 chr2 59906376 59906642 -190781212 - MLT1A1 LTR MaLR 0 365 80 3042 109 18 7 chr2 59906642 59907084 -190780770 - MER83 LTR ERV1 0 448 2 531 279 83 71 chr2 59907114 59907451 -190780403 - L1ME4a LINE L1 -1987 5821 5481 2579 74 0 0 chr2 59907482 59907793 -190780061 - AluY SINE Alu 0 311 1 292 277 22 0 chr2 59907846 59907983 -190779871 - L1ME4a LINE L1 -745 5439 5300 300 159 3 14 chr2 59908162 59908230 -190779624 + MLT1A1 LTR MaLR 1 52 -313 1133 293 75 18 chr2 59908730 59909130 -190778724 + MLT1K LTR MaLR 144 566 -22 2117 155 0 0 chr2 59911351 59911661 -190776193 - AluSx SINE Alu -2 310 1 * 2320 96 0 3 chr2 59911661 59911963 -190775891 - AluSq SINE Alu -12 301 1 61 15 0 0 chr2 59911966 59912034 -190775820 + AT_rich Low_complexity Low_complexity 1 68 0 484 195 0 0 chr2 59912343 59912425 -190775429 - MER81 DNA DNA -32 82 1 488 250 47 0 chr2 59912784 59912912 -190774942 + MIR SINE MIR 121 254 -8 249 239 30 0 chr2 59913252 59913319 -190774535 - MLT1K LTR MaLR -36 552 484 39 88 0 0 chr2 59914694 59914796 -190773058 + AT_rich Low_complexity Low_complexity 1 102 0 373 270 48 8 chr2 59915183 59915309 -190772545 - MIR3 SINE MIR -6 202 72 2270 94 0 3 chr2 59915616 59915915 -190771939 - AluY SINE Alu -13 298 1 2339 137 17 103 chr2 59916150 59916616 -190771238 + MSTB LTR MaLR 1 426 0 243 298 82 53 chr2 59917073 59917244 -190770610 - MIR SINE MIR -56 206 31 206 259 69 0 chr2 59917612 59917670 -190770184 - L2 LINE L2 0 3272 3211 444 151 14 0 chr2 59917927 59918000 -190769854 - MER116 DNA Mariner -6 74 1 532 226 76 82 chr2 59918027 59918355 -190769499 - HAL1 LINE L1 -45 2462 2137 829 158 29 14 chr2 59918711 59918850 -190769004 - MLT1A1 LTR MaLR -52 313 173 465 231 27 34 chr2 59919186 59919444 -190768410 - HAL1 LINE L1 -613 1894 1541 610 207 119 91 chr2 59919460 59919745 -190768109 - HAL1 LINE L1 -1087 1420 1128 * 43622 49 4 1 chr2 59919743 59925869 -190761985 - L1PA4 LINE L1 0 6155 9 193 29 59 0 chr2 59926045 59926079 -190761775 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 701 274 61 69 chr2 59926146 59926507 -190761347 - HAL1 LINE L1 -2127 380 23 4314 184 70 25 chr2 59926554 59926914 -190760940 - L1MB8 LINE L1 0 6178 5836 1453 169 61 30 chr2 59926914 59927210 -190760644 - AluJo SINE Alu -2 310 6 4314 184 70 25 chr2 59927210 59927846 -190760008 - L1MB8 LINE L1 -342 5836 5097 880 194 81 28 chr2 59927835 59928083 -190759771 - L1MB8 LINE L1 -2499 3647 3387 * 562 226 65 80 chr2 59928275 59928474 -190759380 + MIR SINE MIR 18 213 -49 297 292 18 44 chr2 59928518 59928631 -190759223 + L2 LINE L2 3197 3306 -7 225 299 19 37 chr2 59928730 59928837 -190759017 + L3 LINE CR1 623 727 -850 349 303 154 6 chr2 59928877 59929052 -190758802 + L3 LINE CR1 826 1026 -551 1581 111 65 0 chr2 59929507 59929723 -190758131 - MER30 DNA MER1_type 0 230 1 462 297 44 39 chr2 59930405 59930634 -190757220 - L2 LINE L2 -210 3062 2833 1203 222 9 5 chr2 59930838 59931059 -190756795 - MER58A DNA MER1_type 0 224 3 244 153 181 14 chr2 59932624 59932696 -190755158 + MLT1K LTR MaLR 479 562 -26 212 254 79 16 chr2 59933406 59933469 -190754385 + L3 LINE CR1 1509 1575 -2 21 0 0 0 chr2 59933513 59933534 -190754320 + AT_rich Low_complexity Low_complexity 1 21 0 541 137 107 61 chr2 59933666 59933797 -190754057 + MER3 DNA MER1_type 73 209 0 1599 262 36 15 chr2 59934248 59934660 -190753194 - LTR16C LTR ERVL 0 491 71 601 260 61 108 chr2 59936670 59937031 -190750823 - MLT1I LTR MaLR 0 409 66 397 287 87 27 chr2 59937555 59937705 -190750149 - MIR SINE MIR -57 205 47 201 231 0 39 chr2 59939330 59939347 -190748507 + GA-rich Low_complexity Low_complexity 2 18 -33 2272 111 0 9 chr2 59939347 59939662 -190748192 + AluSx SINE Alu 1 312 0 201 231 0 39 chr2 59939662 59939696 -190748158 + GA-rich Low_complexity Low_complexity 18 51 0 22 70 0 0 chr2 59939984 59940027 -190747827 + AT_rich Low_complexity Low_complexity 1 43 0 1726 202 24 48 chr2 59940610 59940987 -190746867 - MLT1A2 LTR MaLR -4 370 3 8792 106 27 9 chr2 59941212 59942424 -190745430 + HUERS-P3b LTR ERV1 6177 7410 -8 3417 100 35 63 chr2 59942426 59942995 -190744859 + LTR9B LTR ERV1 1 553 -91 216 0 0 0 chr2 59942995 59943019 -190744835 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1812 171 3 3 chr2 59943027 59943319 -190744535 + AluJb SINE Alu 1 292 -20 35 0 0 0 chr2 59943851 59943886 -190743968 + AT_rich Low_complexity Low_complexity 1 35 0 781 170 0 0 chr2 59944272 59944384 -190743470 + AluJo SINE Alu 6 117 -195 16428 32 5 0 chr2 59944397 59947014 -190740840 - L1PA4 LINE L1 -2 6153 3526 885 190 15 24 chr2 59947014 59947219 -190740635 + AluJo SINE Alu 102 304 -8 507 298 87 17 chr2 59947588 59947887 -190739967 - L1MC/D LINE L1 -2058 5750 5431 2070 117 3 32 chr2 59947980 59948288 -190739566 - AluSx SINE Alu -10 302 4 2026 88 23 4 chr2 59948613 59948876 -190738978 + L1PA6 LINE L1 5882 6149 -5 466 182 13 0 chr2 59948893 59948970 -190738884 + MER30 DNA MER1_type 153 230 0 405 330 40 35 chr2 59949074 59949274 -190738580 + MLT1I LTR MaLR 39 239 -170 2079 269 64 34 chr2 59949385 59950144 -190737710 - L2 LINE L2 -229 3084 2299 554 272 92 29 chr2 59951518 59951623 -190736231 + MER91A DNA MER1_type 1 123 -73 1749 209 108 72 chr2 59951623 59952125 -190735729 + MLT2B1 LTR ERVL 1 520 0 554 272 92 29 chr2 59952125 59952192 -190735662 + MER91A DNA MER1_type 123 184 -12 478 255 168 0 chr2 59953891 59954040 -190733814 - MER5A DNA MER1_type 0 189 16 315 260 130 65 chr2 59954824 59955101 -190732753 - L2 LINE L2 -56 3257 2963 198 0 0 0 chr2 59955260 59955282 -190732572 + (TTA)n Simple_repeat Simple_repeat 3 24 0 8254 15 0 0 chr2 59955282 59956746 -190731108 - L1PA3 LINE L1 -18 6137 4673 9287 25 0 1 chr2 59956746 59957819 -190730035 + L1PA3 LINE L1 3596 4667 -1479 252 186 68 34 chr2 59958053 59958112 -190729742 + MIR SINE MIR 113 173 -89 213 204 112 82 chr2 59958788 59958886 -190728968 - L2 LINE L2 -4 3268 3168 1089 258 44 59 chr2 59959004 59959481 -190728373 - MLT1D LTR MaLR -35 470 1 1557 145 76 0 chr2 59959525 59959814 -190728040 + MER33 DNA MER1_type 1 311 -13 568 216 182 7 chr2 59959841 59959989 -190727865 + MER5B DNA MER1_type 1 174 -4 211 163 47 0 chr2 59960991 59961034 -190726820 + CT-rich Low_complexity Low_complexity 4 48 0 1188 202 34 69 chr2 59961114 59961540 -190726314 - MLT1A1 LTR MaLR 0 365 1 183 156 0 0 chr2 59961598 59961630 -190726224 + CT-rich Low_complexity Low_complexity 4 35 0 208 311 80 80 chr2 59962295 59962546 -190725308 - L2 LINE L2 -340 2974 2724 270 251 170 82 chr2 59962566 59962750 -190725104 - MLT1H LTR MaLR -8 582 387 2393 80 3 0 chr2 59962969 59963270 -190724584 - AluY SINE Alu -9 302 1 716 277 81 61 chr2 59963588 59963695 -190724159 + MLT1J LTR MaLR 91 194 -317 2173 121 3 0 chr2 59963695 59963993 -190723861 - AluSx SINE Alu -13 299 1 716 277 81 61 chr2 59963993 59964279 -190723575 + MLT1J LTR MaLR 194 492 -19 219 357 92 0 chr2 59964758 59964856 -190722998 - MIR SINE MIR -84 124 18 1873 178 15 43 chr2 59964922 59965389 -190722465 - MER67D LTR ERV1 0 514 1 373 286 173 64 chr2 59966608 59967153 -190720701 - L1M2 LINE L1 -5638 1211 608 192 40 0 0 chr2 59967238 59967263 -190720591 + (CGG)n Simple_repeat Simple_repeat 3 27 0 23 54 0 0 chr2 59967277 59967314 -190720540 + GC_rich Low_complexity Low_complexity 1 37 0 231 328 101 0 chr2 59968896 59969015 -190718839 + MIR SINE MIR 49 179 -83 268 211 111 0 chr2 59970122 59970212 -190717642 + MIR SINE MIR 90 189 -73 242 264 69 14 chr2 59970217 59970289 -190717565 - MIR SINE MIR -126 136 61 237 299 51 60 chr2 59971416 59971533 -190716321 - L2 LINE L2 -6 3266 3151 1990 141 14 0 chr2 59971890 59972181 -190715673 - AluSx SINE Alu -15 297 3 831 144 188 17 chr2 59972197 59972378 -190715476 - L1PA16 LINE L1 -1 6165 5954 598 280 127 59 chr2 59973304 59973993 -190713861 + L2 LINE L2 2554 3300 -13 215 364 73 0 chr2 59974023 59974133 -190713721 - L2 LINE L2 -481 2833 2716 249 307 83 28 chr2 59974137 59974391 -190713463 - L2 LINE L2 -777 2537 2270 263 326 71 21 chr2 59974619 59974760 -190713094 + MIR SINE MIR 64 211 -51 875 207 69 60 chr2 59979792 59980009 -190707845 - MER20 DNA MER1_type 0 219 1 563 229 50 56 chr2 59980017 59980196 -190707658 - MER5B DNA MER1_type 0 178 1 2148 131 0 0 chr2 59982453 59982759 -190705095 - AluSc SINE Alu -3 306 1 25 0 0 0 chr2 59983527 59983552 -190704302 + AT_rich Low_complexity Low_complexity 1 25 0 495 48 0 0 chr2 59983669 59983731 -190704123 + (CA)n Simple_repeat Simple_repeat 1 62 0 349 285 64 52 chr2 59984413 59984585 -190703269 - MIR3 SINE MIR -2 206 33 243 347 32 0 chr2 59986557 59986652 -190701202 + MIR3 SINE MIR 62 159 -49 2536 168 15 10 chr2 59988949 59989343 -190698511 - MSTD LTR MaLR 0 396 1 201 182 0 0 chr2 59992009 59992042 -190695812 + T-rich Low_complexity Low_complexity 1 33 0 180 125 0 0 chr2 59992349 59992381 -190695473 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 382 336 15 0 chr2 59992859 59992993 -190694861 + Charlie8 DNA MER1_type 92 227 -2190 2058 256 57 18 chr2 59992999 59993558 -190694296 - MLT1G LTR MaLR 0 590 10 200 293 108 70 chr2 59994815 59994972 -190692882 + L2 LINE L2 3144 3306 -7 232 294 52 72 chr2 59995349 59995502 -190692352 + MIR SINE MIR 7 156 -106 965 213 32 44 chr2 59996709 59996958 -190690896 + MIR SINE MIR 3 248 -14 3838 216 39 60 chr2 59997091 59998258 -190689596 - L1M4 LINE L1 -1130 5016 3875 1718 212 21 12 chr2 59998375 59998710 -190689144 + MER58B DNA MER1_type 4 341 0 521 291 68 65 chr2 59998751 59999164 -190688690 - L1ME LINE L1 -439 5731 5318 267 284 12 25 chr2 59999202 59999364 -190688490 + T-rich Low_complexity Low_complexity 6 165 0 23 0 0 0 chr2 60000907 60000930 -190686924 + AT_rich Low_complexity Low_complexity 1 23 0 331 250 148 45 chr2 60000945 60001189 -190686665 - L1ME4a LINE L1 -16 6105 5837 311 295 7 74 chr2 60001212 60001361 -190686493 - L1MC4a LINE L1 -169 7639 7501 200 349 64 64 chr2 60001786 60001895 -190685959 - L2 LINE L2 -26 3246 3138 329 313 90 84 chr2 60002372 60002717 -190685137 - L2 LINE L2 -1 3271 2925 1504 218 133 11 chr2 60004402 60004755 -190683099 - MSTD LTR MaLR 0 396 1 271 141 169 0 chr2 60004895 60004962 -190682892 - L1MA9 LINE L1 -5 6290 6205 1157 301 90 25 chr2 60005312 60005833 -190682021 + MARNA DNA Mariner 10 564 -22 993 230 38 14 chr2 60005837 60006050 -190681804 - MER58A DNA MER1_type -1 223 6 4115 179 70 23 chr2 60006537 60007783 -190680071 - L1MB8 LINE L1 -4 6174 4835 1714 118 0 12 chr2 60007783 60008028 -190679826 + AluSg SINE Alu 49 290 -20 4115 179 70 23 chr2 60008028 60008371 -190679483 - L1MB8 LINE L1 -1343 4835 4510 567 321 100 31 chr2 60008389 60008710 -190679144 - L3 LINE CR1 -226 1351 1009 397 297 94 8 chr2 60008723 60008851 -190679003 + MIR SINE MIR 14 152 -110 469 231 0 46 chr2 60008883 60008991 -190678863 + L2 LINE L2 3168 3270 -2 190 286 0 0 chr2 60009025 60009067 -190678787 + MIR SINE MIR 204 245 -17 717 240 97 42 chr2 60010718 60010817 -190677037 + MIR SINE MIR 34 126 -136 947 45 0 0 chr2 60010817 60010927 -190676927 + L1PA4 LINE L1 6038 6147 -8 717 240 97 42 chr2 60010927 60011044 -190676810 + MIR SINE MIR 126 262 0 2351 94 0 3 chr2 60011116 60011425 -190676429 - AluY SINE Alu -3 308 1 200 291 0 0 chr2 60012128 60012183 -190675671 + A-rich Low_complexity Low_complexity 4 58 0 346 266 152 41 chr2 60013153 60013397 -190674457 + L2 LINE L2 2962 3232 -81 1086 309 191 21 chr2 60014363 60014971 -190672883 + L2 LINE L2 1785 2543 -771 1882 132 100 26 chr2 60014971 60015320 -190672534 + THE1C LTR MaLR 1 375 0 1086 309 191 21 chr2 60015320 60015455 -190672399 + L2 LINE L2 2543 2654 -660 359 340 37 27 chr2 60015558 60015746 -190672108 + L2 LINE L2 2854 3043 -270 191 310 130 20 chr2 60015817 60015917 -190671937 - MIR SINE MIR -126 136 26 682 230 42 17 chr2 60016022 60016293 -190671561 - MER58B DNA MER1_type -32 309 1 195 321 0 0 chr2 60016946 60017002 -190670852 + L2 LINE L2 3209 3264 -8 656 111 0 30 chr2 60017824 60017923 -190669931 - 5S rRNA rRNA -25 96 1 23 0 0 0 chr2 60018387 60018410 -190669444 + AT_rich Low_complexity Low_complexity 1 23 0 185 337 76 0 chr2 60018732 60018824 -190669030 + MIR SINE MIR 144 242 -20 601 283 53 35 chr2 60020093 60020319 -190667535 - MIR SINE MIR -30 232 3 23 0 0 0 chr2 60020329 60020352 -190667502 + AT_rich Low_complexity Low_complexity 1 23 0 301 306 58 50 chr2 60020462 60020704 -190667150 - MIR SINE MIR -17 245 2 2174 113 0 3 chr2 60020732 60021025 -190666829 + AluSx SINE Alu 7 298 -14 23 78 0 0 chr2 60021041 60021092 -190666762 + AT_rich Low_complexity Low_complexity 1 51 0 1107 177 40 5 chr2 60022607 60022805 -190665049 - L1MB7 LINE L1 -19 6165 5961 1793 136 14 89 chr2 60022813 60023174 -190664680 + MER51A LTR ERV1 301 634 0 2709 157 119 30 chr2 60023174 60023785 -190664069 - L1MB7 LINE L1 -220 5964 5299 * 6715 133 18 20 chr2 60023768 60024839 -190663015 - L1MA3 LINE L1 0 7724 6656 2750 136 21 26 chr2 60024839 60025266 -190662588 - MSTB LTR MaLR 0 426 2 6715 133 18 20 chr2 60025266 60025631 -190662223 - L1MA3 LINE L1 -1068 6656 6292 * 16253 151 51 1 chr2 60025608 60028234 -190659620 - L1MA3 LINE L1 -4797 2768 12 2135 201 43 35 chr2 60028237 60028259 -190659595 - L1MB7 LINE L1 -818 5328 5308 1216 176 179 35 chr2 60028259 60028578 -190659276 + MLT1A1 LTR MaLR 1 365 0 1751 99 9 4 chr2 60028584 60028816 -190659038 - AluSx SINE Alu -79 233 1 2135 201 43 35 chr2 60028816 60029324 -190658530 - L1MB7 LINE L1 -842 5304 4787 341 340 121 14 chr2 60031300 60031515 -190656339 - MIR SINE MIR -14 248 11 379 319 56 38 chr2 60031589 60031802 -190656052 - LTR33 LTR ERVL -254 267 51 * 678 263 122 19 chr2 60031801 60032071 -190655783 - LTR33 LTR ERVL -223 298 1 290 236 0 0 chr2 60033859 60033914 -190653940 + L2 LINE L2 3218 3272 0 486 18 0 0 chr2 60034497 60034554 -190653300 - L1PA4 LINE L1 -3 6152 6096 2066 122 7 3 chr2 60034644 60034938 -190652916 - AluSg SINE Alu -15 295 1 2871 44 0 15 chr2 60035132 60035472 -190652382 - L1PA7 LINE L1 0 6154 5820 953 93 0 16 chr2 60035498 60035652 -190652202 + AluSg/x SINE Alu 170 312 0 641 215 37 37 chr2 60035653 60035844 -190652010 - L1ME3A LINE L1 -26 6144 5954 659 322 119 8 chr2 60035881 60036435 -190651419 - L2 LINE L2 -223 3049 2403 225 229 57 14 chr2 60036630 60036700 -190651154 - L1MC4 LINE L1 -1334 6708 6636 389 271 145 52 chr2 60037128 60037397 -190650457 - L2 LINE L2 -6 3307 3014 697 268 45 19 chr2 60037482 60037806 -190650048 - MLT1I LTR MaLR -15 394 64 209 292 84 65 chr2 60038008 60038341 -190649513 - L2 LINE L2 -1133 2181 1839 188 35 35 0 chr2 60038341 60038370 -190649484 + (TTG)n Simple_repeat Simple_repeat 2 31 0 209 292 84 65 chr2 60038370 60038419 -190649435 - L2 LINE L2 -1475 1839 1792 238 299 55 73 chr2 60040232 60040396 -190647458 - L2 LINE L2 -575 2739 2579 292 353 113 26 chr2 60041265 60041645 -190646209 - L2 LINE L2 -1678 1636 1224 330 301 60 6 chr2 60043619 60043777 -190644077 + MIR SINE MIR 8 171 -62 187 300 146 55 chr2 60044136 60044246 -190643608 - L2 LINE L2 -5 3267 3148 204 40 0 0 chr2 60044582 60044607 -190643247 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 252 77 0 0 chr2 60096536 60096575 -190591279 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 29 47 0 0 chr2 60096783 60096826 -190591028 + AT_rich Low_complexity Low_complexity 1 43 0 1214 115 19 6 chr2 60097185 60097355 -190590499 + MLT2A1 LTR ERVL 221 515 -39 216 0 0 0 chr2 60097355 60097379 -190590475 + (TA)n Simple_repeat Simple_repeat 1 24 0 1214 115 19 6 chr2 60097379 60097396 -190590458 + MLT2A1 LTR ERVL 515 530 -24 490 240 14 7 chr2 60097733 60097879 -190589975 - L1M4 LINE L1 -1544 4602 4456 310 280 53 8 chr2 60097847 60097979 -190589875 - L1M4 LINE L1 -2572 3574 3437 * 439 174 0 0 chr2 60098040 60098132 -190589722 + L1M4 LINE L1 3688 3779 -2367 2033 189 65 2 chr2 60098139 60098584 -190589270 - L1MB7 LINE L1 -183 6001 5529 382 373 0 16 chr2 60098585 60098711 -190589143 + L2 LINE L2 3145 3268 -4 344 324 84 67 chr2 60099385 60099623 -190588231 + MIR SINE MIR 15 256 -6 211 344 97 7 chr2 60099657 60099811 -190588043 + L2 LINE L2 2814 2981 -291 694 250 0 7 chr2 60100561 60100705 -190587149 - FRAM SINE Alu -25 151 9 7380 89 0 0 chr2 60101135 60102967 -190584887 + L1PA7 LINE L1 4323 6148 -6 204 321 12 37 chr2 60103678 60103759 -190584095 - L2 LINE L2 -91 3181 3103 21 0 0 0 chr2 60105412 60105433 -190582421 + AT_rich Low_complexity Low_complexity 1 21 0 2258 116 47 14 chr2 60105671 60106034 -190581820 - THE1C LTR MaLR 0 375 1 363 44 0 0 chr2 60107805 60107850 -190580004 + (TG)n Simple_repeat Simple_repeat 2 46 0 21 57 0 0 chr2 60107883 60107918 -190579936 + AT_rich Low_complexity Low_complexity 1 35 0 26 50 0 0 chr2 60107992 60108032 -190579822 + AT_rich Low_complexity Low_complexity 1 40 0 508 241 80 19 chr2 60108648 60108810 -190579044 - MER5B DNA MER1_type -4 174 3 437 272 54 60 chr2 60108903 60109087 -190578767 - MIR SINE MIR -33 229 47 989 241 59 18 chr2 60109278 60109564 -190578290 + MER58B DNA MER1_type 39 336 -5 24 0 0 0 chr2 60109584 60109608 -190578246 + AT_rich Low_complexity Low_complexity 1 24 0 1325 168 31 0 chr2 60109736 60109992 -190577862 - L1MA6 LINE L1 -322 5978 5715 508 295 22 27 chr2 60110328 60110511 -190577343 + MER5A DNA MER1_type 2 183 -6 452 256 50 33 chr2 60110851 60111031 -190576823 + LTR33 LTR ERVL 1 183 -338 229 414 6 25 chr2 60111385 60111542 -190576312 + L2 LINE L2 2907 3060 -212 209 265 36 0 chr2 60113384 60113467 -190574387 + (TA)n Simple_repeat Simple_repeat 2 87 0 21 0 0 0 chr2 60115433 60115454 -190572400 + AT_rich Low_complexity Low_complexity 1 21 0 467 258 16 0 chr2 60116199 60116327 -190571527 + MER115 DNA AcHobo 553 682 -11 234 346 96 0 chr2 60116698 60116802 -190571052 - MIR SINE MIR -77 131 18 252 278 59 91 chr2 60116819 60117006 -190570848 + L2 LINE L2 3114 3294 -19 402 319 49 5 chr2 60117045 60117247 -190570607 + MIR SINE MIR 12 218 -44 301 231 48 87 chr2 60119375 60119479 -190568375 - L2 LINE L2 -21 3292 3193 27 49 0 0 chr2 60121127 60121168 -190566686 + AT_rich Low_complexity Low_complexity 1 41 0 220 231 115 26 chr2 60121394 60121472 -190566382 - L2 LINE L2 -20 3252 3168 322 325 187 23 chr2 60121508 60121813 -190566041 + L2 LINE L2 2292 2646 -668 445 298 8 0 chr2 60121973 60122097 -190565757 - MIR SINE MIR -15 247 123 981 215 56 0 chr2 60122927 60123141 -190564713 - MLT1E LTR MaLR -23 570 345 766 239 37 50 chr2 60123152 60123370 -190564484 - MLT1E LTR MaLR -353 240 26 317 220 0 0 chr2 60123418 60123468 -190564386 - AluJ/FRAM SINE Alu -22 280 231 1611 180 10 26 chr2 60123755 60124061 -190563793 - AluJo SINE Alu -9 303 3 355 179 53 21 chr2 60124411 60124506 -190563348 + L1ME1 LINE L1 31 128 -6295 * 16378 72 1 0 chr2 60124494 60126612 -190561242 - L1P LINE L1 -4024 2122 4 985 226 9 0 chr2 60126612 60126824 -190561030 + L1MB7 LINE L1 5913 6126 -58 5450 164 38 20 chr2 60126855 60128775 -190559079 + L1MA6 LINE L1 4349 6300 0 968 294 95 13 chr2 60128790 60129487 -190558367 + L1ME1 LINE L1 1715 2468 -4654 * 2914 239 51 31 chr2 60129477 60130447 -190557407 + L1ME1 LINE L1 5971 6957 -4 1982 128 0 49 chr2 60130849 60131177 -190556677 - AluSx SINE Alu 0 312 1 982 102 0 22 chr2 60131177 60131314 -190556540 - AluSq/x SINE Alu -178 135 2 547 277 140 41 chr2 60131868 60132160 -190555694 - L2 LINE L2 -32 3281 2961 385 247 11 32 chr2 60132265 60132358 -190555496 - MER2 DNA MER2_type -247 98 8 401 272 109 51 chr2 60132367 60132643 -190555211 - HAL1 LINE L1 -1419 1088 797 596 283 50 47 chr2 60132692 60133010 -190554844 - HAL1 LINE L1 -1785 722 404 22 35 0 0 chr2 60133421 60133450 -190554404 + AT_rich Low_complexity Low_complexity 1 29 0 328 294 93 26 chr2 60133688 60133882 -190553972 - L1ME2 LINE L1 -213 5951 5745 207 186 0 0 chr2 60133882 60133925 -190553929 + (TA)n Simple_repeat Simple_repeat 1 43 0 242 233 0 33 chr2 60133925 60133985 -190553869 - L1ME2 LINE L1 -449 5721 5664 410 191 0 142 chr2 60135017 60135179 -190552675 - L1ME2 LINE L1 -618 5546 5408 411 300 23 0 chr2 60135194 60135324 -190552530 + LTR67 LTR ERVL 414 546 -11 227 305 146 61 chr2 60135856 60136020 -190551834 + MER5B DNA MER1_type 1 178 0 389 288 41 27 chr2 60136759 60136905 -190550949 - L2 LINE L2 -1 3312 3165 27 49 0 0 chr2 60137112 60137153 -190550701 + AT_rich Low_complexity Low_complexity 1 41 0 180 176 0 0 chr2 60138100 60138134 -190549720 + T-rich Low_complexity Low_complexity 2 35 0 629 334 62 73 chr2 60138539 60139128 -190548726 - L2 LINE L2 -420 2894 2315 11716 33 6 0 chr2 60139128 60141296 -190546558 + L1PA3 LINE L1 3978 6150 -5 629 334 62 73 chr2 60141296 60141533 -190546321 - L2 LINE L2 -999 2315 2077 22 56 0 0 chr2 60142141 60142177 -190545677 + AT_rich Low_complexity Low_complexity 1 36 0 260 70 23 0 chr2 60143455 60143498 -190544356 + (CA)n Simple_repeat Simple_repeat 1 44 0 969 239 15 5 chr2 60144440 60144637 -190543217 + MLT1A1 LTR MaLR 144 342 -23 725 172 13 40 chr2 60144637 60144788 -190543066 - MLT1A1 LTR MaLR -218 147 1 1125 311 37 39 chr2 60145136 60145647 -190542207 + LTR33 LTR ERVL 12 521 0 449 317 145 30 chr2 60146007 60146379 -190541475 + L2 LINE L2 2859 3273 -40 2995 201 48 28 chr2 60146386 60146423 -190541431 - L1MB8 LINE L1 -1 6177 6142 219 69 0 0 chr2 60146423 60146452 -190541402 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 2995 201 48 28 chr2 60146452 60147130 -190540724 - L1MB8 LINE L1 -36 6142 5448 1208 239 54 57 chr2 60147327 60147699 -190540155 + MLT1A2 LTR MaLR 4 374 0 2237 101 10 0 chr2 60148685 60148993 -190538861 - AluSp SINE Alu -2 311 1 208 200 31 77 chr2 60149081 60149146 -190538708 - L2 LINE L2 -94 3219 3158 451 319 326 3 chr2 60149231 60149623 -190538231 - L2 LINE L2 -337 2977 2459 470 207 0 0 chr2 60150732 60150814 -190537040 + MER58B DNA MER1_type 260 341 0 273 250 170 18 chr2 60151018 60151130 -190536724 + L1ME3A LINE L1 6040 6168 -2 22 35 0 0 chr2 60152616 60152645 -190535209 + AT_rich Low_complexity Low_complexity 1 29 0 238 250 103 0 chr2 60152819 60152887 -190534967 + MER81 DNA DNA 39 113 -1 797 275 6 0 chr2 60152959 60153130 -190534724 - MER58A DNA MER1_type -49 175 4 261 301 59 146 chr2 60153620 60154058 -190533796 + L2 LINE L2 2854 3253 -19 792 233 11 6 chr2 60154943 60155119 -190532735 - MER5B DNA MER1_type -1 177 1 322 212 91 50 chr2 60155242 60155321 -190532533 + MER5A DNA MER1_type 10 95 -94 2497 146 65 40 chr2 60155321 60155827 -190532027 - LTR44 LTR ERV1 0 519 1 322 212 91 50 chr2 60155827 60155846 -190532008 + MER5A DNA MER1_type 95 112 -77 354 45 0 0 chr2 60156222 60156266 -190531588 + (TA)n Simple_repeat Simple_repeat 2 45 0 23 0 0 0 chr2 60158475 60158498 -190529356 + AT_rich Low_complexity Low_complexity 1 23 0 441 242 232 28 chr2 60158498 60158709 -190529145 - MIR SINE MIR -8 254 1 2159 117 34 23 chr2 60159818 60160168 -190527686 + THE1B LTR MaLR 1 354 -10 21 0 0 0 chr2 60160395 60160416 -190527438 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 60160965 60160991 -190526863 + AT_rich Low_complexity Low_complexity 1 26 0 3208 164 17 7 chr2 60161892 60162477 -190525377 + L1MC1 LINE L1 5734 6324 -9 22 35 0 0 chr2 60162673 60162702 -190525152 + AT_rich Low_complexity Low_complexity 1 29 0 207 179 12 60 chr2 60163843 60163927 -190523927 + (TAA)n Simple_repeat Simple_repeat 1 80 0 2519 70 0 0 chr2 60164037 60164339 -190523515 + AluY SINE Alu 1 302 -9 456 108 0 0 chr2 60164686 60164751 -190523103 + L1PA8 LINE L1 6 70 -6391 26473 133 11 47 chr2 60164761 60165837 -190522017 + L1PA8 LINE L1 314 1427 -5034 2452 67 7 0 chr2 60165837 60166136 -190521718 + AluY SINE Alu 1 301 -10 26473 133 11 47 chr2 60166136 60169938 -190517916 + L1PA8 LINE L1 1427 5080 -1381 189 0 0 0 chr2 60169938 60169959 -190517895 + (CA)n Simple_repeat Simple_repeat 2 22 0 26473 133 11 47 chr2 60169959 60170430 -190517424 + L1PA8 LINE L1 5080 5567 -894 6817 72 9 1 chr2 60170431 60171341 -190516513 + L1PA8 LINE L1 5569 6485 -2 1757 211 63 17 chr2 60171511 60171923 -190515931 + MLT1D LTR MaLR 25 455 -50 331 353 26 13 chr2 60172012 60172168 -190515686 - MER5A DNA MER1_type -8 181 24 2322 127 14 3 chr2 60173091 60173454 -190514400 + L1PA13 LINE L1 5795 6161 -2 188 300 38 25 chr2 60174473 60174553 -190513301 - MIR SINE MIR -89 173 93 289 312 72 29 chr2 60175223 60175361 -190512493 - MLT1J2 LTR MaLR -306 144 1 195 162 0 0 chr2 60175825 60175862 -190511992 + (TA)n Simple_repeat Simple_repeat 1 37 0 2298 107 0 0 chr2 60177652 60177952 -190509902 + AluSx SINE Alu 3 302 -10 294 332 113 29 chr2 60177959 60178197 -190509657 - MLT1K LTR MaLR -2 586 329 2809 13 0 0 chr2 60178365 60178673 -190509181 + AluYb8 SINE Alu 1 308 -10 1991 155 0 0 chr2 60178677 60178973 -190508881 + AluSx SINE Alu 1 296 -16 21 71 0 0 chr2 60179295 60179337 -190508517 + AT_rich Low_complexity Low_complexity 1 42 0 383 298 68 30 chr2 60179948 60180213 -190507641 + L1ME LINE L1 5469 5743 -378 358 122 44 11 chr2 60180481 60180571 -190507283 + GA-rich Low_complexity Low_complexity 4 96 0 693 292 132 37 chr2 60180647 60181102 -190506752 - MLT1H LTR MaLR -9 540 43 569 344 49 56 chr2 60181189 60181675 -190506179 + L1MC/D LINE L1 5300 5782 -2026 2205 117 3 0 chr2 60181767 60182075 -190505779 + AluSp SINE Alu 1 309 -4 1654 176 45 0 chr2 60182278 60182398 -190505456 + AluSx SINE Alu 1 114 -198 238 0 26 51 chr2 60182398 60182437 -190505417 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1654 176 45 0 chr2 60182437 60182605 -190505249 + AluSx SINE Alu 114 302 -10 227 250 152 98 chr2 60182673 60182857 -190504997 - L2 LINE L2 -1 3312 3119 298 327 62 18 chr2 60182919 60183032 -190504822 - L2 LINE L2 -18 3295 3178 426 286 80 36 chr2 60184298 60184599 -190503255 + L1M4 LINE L1 4560 4873 -1273 207 0 0 0 chr2 60185075 60185098 -190502756 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 60185316 60185338 -190502516 + AT_rich Low_complexity Low_complexity 1 22 0 686 237 19 10 chr2 60185420 60185627 -190502227 - L1ME2 LINE L1 -213 5951 5743 277 303 67 12 chr2 60185706 60185893 -190501961 - MER58 DNA MER1_type -1 2419 9 1500 148 42 110 chr2 60185956 60185997 -190501857 - THE1C LTR MaLR 0 375 333 5939 107 2 5 chr2 60185997 60186998 -190500856 + L1PB1 LINE L1 5148 6146 -5 1500 148 42 110 chr2 60186998 60187356 -190500498 - THE1C LTR MaLR -42 333 3 468 211 92 14 chr2 60187359 60187501 -190500353 - L1M4 LINE L1 -1950 4196 4044 21 0 0 0 chr2 60187754 60187775 -190500079 + AT_rich Low_complexity Low_complexity 1 21 0 342 304 74 14 chr2 60187891 60188039 -190499815 + MER58B DNA MER1_type 185 341 0 309 376 38 13 chr2 60188095 60188252 -190499602 - L1M4 LINE L1 -1956 4190 4030 361 324 83 12 chr2 60188613 60188866 -190498988 - L1MDb LINE L1 -4614 2107 1837 266 49 0 24 chr2 60188900 60188941 -190498913 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 2267 44 0 0 chr2 60188941 60189211 -190498643 - L1PA3 LINE L1 -24 6131 5862 267 306 43 30 chr2 60189356 60189588 -190498266 - L1MDb LINE L1 -4925 1605 1371 445 232 11 53 chr2 60189595 60189785 -190498069 - L1MDb LINE L1 -5066 1477 1296 * 968 224 33 0 chr2 60189780 60190025 -190497829 - L1MC3 LINE L1 0 7785 7533 321 222 34 51 chr2 60190028 60190145 -190497709 - L1MC3 LINE L1 -835 6950 6836 209 176 0 0 chr2 60190258 60190292 -190497562 + (TG)n Simple_repeat Simple_repeat 2 35 0 786 310 42 16 chr2 60190292 60190675 -190497179 - L1MDb LINE L1 -6119 421 105 25 51 0 0 chr2 60190958 60190997 -190496857 + AT_rich Low_complexity Low_complexity 1 39 0 410 325 66 35 chr2 60191469 60191755 -190496099 - L1M4 LINE L1 -3217 2929 2635 412 309 22 15 chr2 60193875 60194011 -190493843 - L2 LINE L2 -1068 2246 2110 266 330 31 92 chr2 60194133 60194394 -190493460 - L2 LINE L2 -2114 1200 956 283 363 75 38 chr2 60194443 60194763 -190493091 - L2 LINE L2 -2596 718 387 3203 129 34 11 chr2 60194763 60195298 -190492556 + LTR10A LTR ERV1 1 547 -62 3031 181 25 13 chr2 60195954 60196007 -190491847 - L1P LINE L1 -797 5349 5298 226 0 59 0 chr2 60196007 60196041 -190491813 + (TA)n Simple_repeat Simple_repeat 1 36 0 3031 181 25 13 chr2 60196041 60196618 -190491236 - L1P LINE L1 -848 5298 4711 1463 65 0 0 chr2 60196618 60196801 -190491053 + L1PA11 LINE L1 5985 6168 -6 24 32 0 0 chr2 60198546 60198577 -190489277 + AT_rich Low_complexity Low_complexity 1 31 0 276 345 122 9 chr2 60198676 60198905 -190488949 + L2 LINE L2 2172 2426 -888 764 218 164 17 chr2 60199577 60199875 -190487979 + MER69 DNA AcHobo 2180 2521 -5 277 156 16 16 chr2 60200276 60200340 -190487514 + CT-rich Low_complexity Low_complexity 1 64 0 1749 155 0 25 chr2 60200347 60200631 -190487223 - AluSx SINE Alu -35 277 1 200 246 14 0 chr2 60200633 60200702 -190487152 + CT-rich Low_complexity Low_complexity 5 74 0 197 146 21 0 chr2 60201796 60201844 -190486010 + (TA)n Simple_repeat Simple_repeat 1 49 0 22 56 0 0 chr2 60201871 60201907 -190485947 + AT_rich Low_complexity Low_complexity 1 36 0 29 0 0 0 chr2 60201947 60201976 -190485878 + AT_rich Low_complexity Low_complexity 1 29 0 887 246 99 52 chr2 60201981 60202456 -190485398 - L1ME1 LINE L1 -2 6440 5956 377 285 47 21 chr2 60202472 60202665 -190485189 - L1ME1 LINE L1 -2535 3891 3694 626 280 38 4 chr2 60202696 60202932 -190484922 - L1ME1 LINE L1 -3913 2694 2451 3808 142 80 15 chr2 60202934 60203187 -190484667 + Tigger3b DNA MER2_type 2 237 -2791 198 0 0 0 chr2 60203187 60203209 -190484645 + (CTATA)n Simple_repeat Simple_repeat 1 22 0 3808 142 80 15 chr2 60203209 60203683 -190484171 + Tigger3b DNA MER2_type 237 776 -455 14084 214 19 21 chr2 60203694 60207053 -190480801 - L1PA15 LINE L1 0 6816 3454 1148 271 3 0 chr2 60207053 60207384 -190480470 - AluJo SINE Alu 0 333 2 14084 214 19 21 chr2 60207384 60207811 -190480043 - L1PA15 LINE L1 -3362 3454 3028 1535 179 47 0 chr2 60207811 60208090 -190479764 - AluJb SINE Alu -20 292 1 14084 214 19 21 chr2 60208090 60208968 -190478886 - L1PA15 LINE L1 -3788 3028 2158 499 130 13 0 chr2 60208970 60209047 -190478807 - LTR3 LTR ERVK -350 82 5 545 310 47 30 chr2 60209051 60209283 -190478571 - L1PA15 LINE L1 -5340 1447 1212 3008 222 11 17 chr2 60209359 60210063 -190477791 - L1PA13 LINE L1 -4648 2139 1440 311 53 0 0 chr2 60210063 60210101 -190477753 - HERVK3 LTR ERVK -7205 38 1 2128 180 43 14 chr2 60210108 60210524 -190477330 - LTR3 LTR ERVK 0 432 5 553 271 0 8 chr2 60210528 60210657 -190477197 - L1PA13 LINE L1 -5340 1447 1320 2573 291 16 27 chr2 60210767 60211499 -190476355 - L1PA13 LINE L1 -6063 724 1 2402 183 42 0 chr2 60211512 60211959 -190475895 + Tigger3b DNA MER2_type 766 1231 0 548 247 95 100 chr2 60212250 60212765 -190475089 - L1ME1 LINE L1 -4544 2063 1352 2482 286 95 15 chr2 60212771 60213864 -190473990 - L1ME1 LINE L1 -5169 1438 258 29 28 0 0 chr2 60214084 60214120 -190473734 + AT_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr2 60214166 60214200 -190473654 + AT_rich Low_complexity Low_complexity 1 34 0 2193 181 26 40 chr2 60214935 60214997 -190472857 - MSTB LTR MaLR -2 424 363 10450 113 14 53 chr2 60214997 60216683 -190471171 + L1PA7 LINE L1 3785 5415 -739 2032 100 0 0 chr2 60216683 60216943 -190470911 + AluSq SINE Alu 1 260 -53 10450 113 14 53 chr2 60216943 60217655 -190470199 + L1PA7 LINE L1 5415 6154 0 2193 181 26 40 chr2 60217655 60218022 -190469832 - MSTB LTR MaLR -63 363 1 459 0 0 0 chr2 60218159 60218210 -190469644 + (TA)n Simple_repeat Simple_repeat 1 51 0 21 0 0 0 chr2 60218419 60218440 -190469414 + AT_rich Low_complexity Low_complexity 1 21 0 227 270 0 0 chr2 60219332 60219395 -190468459 + L1ME3 LINE L1 6067 6129 -33 21 57 0 0 chr2 60219404 60219439 -190468415 + AT_rich Low_complexity Low_complexity 1 35 0 1444 192 52 79 chr2 60219678 60220059 -190467795 - MLT1C LTR MaLR -50 417 47 30 59 0 0 chr2 60220127 60220178 -190467676 + AT_rich Low_complexity Low_complexity 1 51 0 24 91 0 0 chr2 60221516 60221582 -190466272 + AT_rich Low_complexity Low_complexity 1 66 0 9493 232 38 34 chr2 60222867 60225714 -190462140 + L1PA13 LINE L1 1 2868 -3929 677 159 19 0 chr2 60225724 60225831 -190462023 + L1PA15 LINE L1 1 109 -6678 8984 184 18 50 chr2 60225836 60228159 -190459695 + L1PA15 LINE L1 3900 6143 -669 2182 103 3 0 chr2 60228159 60228450 -190459404 + AluSg SINE Alu 14 305 -5 2330 139 11 0 chr2 60228456 60228829 -190459025 + L1PA15 LINE L1 6433 6809 -7 643 326 76 0 chr2 60229568 60229804 -190458050 + MIR SINE MIR 2 255 -7 545 12 49 0 chr2 60230309 60230391 -190457463 + (TA)n Simple_repeat Simple_repeat 2 87 0 364 320 100 27 chr2 60231044 60231375 -190456479 - L1MC4 LINE L1 -125 7917 7563 234 128 0 0 chr2 60232542 60232581 -190455273 + (TA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr2 60233172 60233193 -190454661 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr2 60233623 60233674 -190454180 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr2 60233732 60233753 -190454101 + AT_rich Low_complexity Low_complexity 1 21 0 1530 250 21 45 chr2 60233865 60234031 -190453823 + MER89 LTR ERV1 4 172 -387 2365 49 3 0 chr2 60234031 60234319 -190453535 + AluY SINE Alu 1 289 -22 1530 250 21 45 chr2 60234319 60234624 -190453230 + MER89 LTR ERV1 172 464 -95 4469 192 33 14 chr2 60234625 60235504 -190452350 + MSTA-int LTR MaLR 749 1644 -7 2298 173 22 12 chr2 60235518 60235935 -190451919 + MSTA LTR MaLR 8 428 0 411 125 0 0 chr2 60235935 60235992 -190451862 + MER89 LTR ERV1 503 559 0 21 0 0 0 chr2 60236494 60236515 -190451339 + AT_rich Low_complexity Low_complexity 1 21 0 2273 108 10 0 chr2 60236571 60236877 -190450977 - AluSp SINE Alu -4 309 1 249 94 78 31 chr2 60237701 60237765 -190450089 + T-rich Low_complexity Low_complexity 5 71 0 2358 170 111 39 chr2 60238104 60238256 -190449598 - L1MA9 LINE L1 -1 6311 6171 279 0 0 0 chr2 60238256 60238287 -190449567 + (TG)n Simple_repeat Simple_repeat 2 32 0 2358 170 111 39 chr2 60238287 60238758 -190449096 - L1MA9 LINE L1 -141 6171 5643 301 183 161 21 chr2 60238834 60238927 -190448927 + L1 LINE L1 3936 4041 -2105 1991 207 9 20 chr2 60238962 60239753 -190448101 - L1MA9 LINE L1 -678 5634 4850 3439 174 28 90 chr2 60239762 60240700 -190447154 + L1 LINE L1 3936 4815 -1331 9265 36 2 4 chr2 60241463 60243372 -190444482 - L1PA4 LINE L1 0 6155 4241 456 293 13 38 chr2 60245307 60245464 -190442390 + MER5B DNA MER1_type 1 153 -25 256 214 29 14 chr2 60245464 60245534 -190442320 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 24 67 0 0 chr2 60247038 60247083 -190440771 + AT_rich Low_complexity Low_complexity 1 45 0 861 128 0 0 chr2 60247221 60247346 -190440508 + AluSg/x SINE Alu 186 310 0 22 0 0 0 chr2 60248952 60248974 -190438880 + AT_rich Low_complexity Low_complexity 1 22 0 286 319 26 35 chr2 60249620 60249736 -190438118 - MIR SINE MIR -146 116 2 318 26 0 0 chr2 60250887 60250926 -190436928 + (CA)n Simple_repeat Simple_repeat 2 40 0 2193 104 16 0 chr2 60251019 60251326 -190436528 + AluSp SINE Alu 2 313 0 1208 288 104 11 chr2 60251459 60251911 -190435943 - LTR33 LTR ERVL -2 519 26 1044 248 55 25 chr2 60251933 60252271 -190435583 - MLT1E2 LTR MaLR -7 619 217 4687 239 27 19 chr2 60252273 60253663 -190434191 - L1M4 LINE L1 -1390 5254 3853 260 213 16 0 chr2 60253657 60253718 -190434136 - L1M4 LINE L1 -5252 1394 1333 * 998 203 30 0 chr2 60253718 60253920 -190433934 + MER2 DNA MER2_type 1 208 -137 466 214 35 40 chr2 60254033 60254206 -190433648 - L1M4 LINE L1 -5202 1340 1169 381 176 0 0 chr2 60254215 60254289 -190433565 + L1MA9 LINE L1 6086 6159 -153 528 233 35 120 chr2 60254345 60254662 -190433192 - L1M4 LINE L1 -5666 876 587 22 35 0 0 chr2 60255059 60255088 -190432766 + AT_rich Low_complexity Low_complexity 1 29 0 1104 233 17 17 chr2 60255148 60255440 -190432414 - L1 LINE L1 -2059 4087 3796 269 350 134 49 chr2 60255613 60256142 -190431712 + L2 LINE L2 933 1506 -1808 255 335 102 51 chr2 60256254 60256406 -190431448 - MER63A DNA MER1_type -1481 207 41 222 91 0 0 chr2 60256406 60256439 -190431415 + (TA)n Simple_repeat Simple_repeat 1 33 0 255 335 102 51 chr2 60256439 60256483 -190431371 - MER63A DNA MER1_type -1647 41 1 403 261 116 10 chr2 60256768 60256967 -190430887 + L1ME LINE L1 5575 5794 -327 2129 124 0 0 chr2 60258320 60258627 -190429227 + AluSc SINE Alu 1 307 -2 322 123 231 0 chr2 60259216 60259281 -190428573 - MADE1 DNA Mariner 0 80 1 180 206 68 41 chr2 60259501 60259574 -190428280 - MER5C DNA MER1_type -28 296 222 1150 168 40 47 chr2 60260658 60260980 -190426874 + MER33 DNA MER1_type 5 324 0 4036 228 47 5 chr2 60261034 60262073 -190425781 + Tigger6a DNA MER2_type 1 1083 0 5519 107 0 30 chr2 60262502 60263360 -190424494 - L1PA7 LINE L1 -3404 2742 1911 17892 94 15 0 chr2 60263360 60266725 -190421129 + L1PA7 LINE L1 2768 6152 -2 192 341 37 12 chr2 60267134 60267216 -190420638 - MIR SINE MIR -97 165 82 491 270 68 49 chr2 60267314 60267577 -190420277 + LTR16B LTR ERVL 138 405 -59 239 287 42 60 chr2 60267788 60267955 -190419899 - LTR33A LTR ERVL -347 176 13 348 284 0 0 chr2 60268903 60268977 -190418877 + MER21B LTR ERV1 21 94 -769 3016 249 47 17 chr2 60268978 60269725 -190418129 + MER21B LTR ERV1 48 816 -47 383 329 60 86 chr2 60270084 60270630 -190417224 - L2 LINE L2 -18 3295 2758 209 371 103 0 chr2 60272581 60272678 -190415176 + L2 LINE L2 1841 1947 -1367 26 0 0 0 chr2 60273417 60273443 -190414411 + AT_rich Low_complexity Low_complexity 1 26 0 200 224 0 20 chr2 60274180 60274229 -190413625 + GA-rich Low_complexity Low_complexity 2 49 0 22 56 0 0 chr2 60274271 60274307 -190413547 + AT_rich Low_complexity Low_complexity 1 36 0 1477 241 43 12 chr2 60274528 60275087 -190412767 + L1M3c LINE L1 955 1794 -4519 407 286 138 80 chr2 60276405 60276943 -190410911 + L3 LINE CR1 996 1564 -13 223 258 65 16 chr2 60277090 60277152 -190410702 - L2 LINE L2 -1 3312 3248 462 191 11 0 chr2 60277606 60277700 -190410154 - Tigger1 DNA MER2_type -1672 746 652 1422 147 123 28 chr2 60277700 60278057 -190409797 + MSTA LTR MaLR 2 428 0 1354 185 21 0 chr2 60278057 60278292 -190409562 - Tigger1 DNA MER2_type -1761 657 418 623 224 0 0 chr2 60278409 60278525 -190409329 - Tigger1 DNA MER2_type -2302 116 1 2037 183 59 7 chr2 60279912 60280317 -190407537 - MSTA LTR MaLR -2 426 1 745 315 82 43 chr2 60281120 60281609 -190406245 + L2 LINE L2 2804 3311 -2 744 311 69 36 chr2 60284897 60285202 -190402652 - L3 LINE CR1 -2 1575 1261 189 0 0 0 chr2 60285405 60285426 -190402428 + (A)n Simple_repeat Simple_repeat 1 21 0 2384 151 42 2 chr2 60285459 60285869 -190401985 - MSTA LTR MaLR 0 428 3 797 222 61 28 chr2 60286120 60286332 -190401522 + MER20 DNA MER1_type 1 219 0 2954 109 6 34 chr2 60286441 60286919 -190400935 - MER4C LTR ERV1 0 465 1 1943 206 22 17 chr2 60287129 60287541 -190400313 - MLT2D LTR ERVL 0 414 1 1376 194 127 58 chr2 60288004 60288483 -190399371 + MER67D LTR ERV1 3 514 0 504 99 0 0 chr2 60289136 60289207 -190398647 - L1MA2 LINE L1 -8 6296 6226 14413 186 38 9 chr2 60289224 60292899 -190394955 - L1M1 LINE L1 -743 6822 3174 22 80 0 0 chr2 60292945 60292995 -190394859 + AT_rich Low_complexity Low_complexity 1 50 0 24 32 0 0 chr2 60293462 60293493 -190394361 + AT_rich Low_complexity Low_complexity 1 31 0 2354 245 41 29 chr2 60295184 60295869 -190391985 - L1MC4a LINE L1 -4 7804 7112 2193 119 0 3 chr2 60296225 60296535 -190391319 - AluSc SINE Alu 0 309 1 28 29 0 0 chr2 60296558 60296593 -190391261 + AT_rich Low_complexity Low_complexity 1 35 0 14596 199 15 13 chr2 60296593 60299485 -190388369 - L1PA14 LINE L1 -13 6148 3240 1987 170 3 18 chr2 60299485 60299827 -190388027 - MER1B DNA MER1_type 0 337 1 14596 199 15 13 chr2 60299827 60301109 -190386745 - L1PA14 LINE L1 -2921 3240 1962 1969 253 69 24 chr2 60301189 60302090 -190385764 - L1ME2 LINE L1 -35 6129 5202 22 35 0 0 chr2 60302100 60302129 -190385725 + AT_rich Low_complexity Low_complexity 1 29 0 771 204 24 88 chr2 60302316 60302566 -190385288 - MLT1D LTR MaLR -270 235 2 1563 175 6 57 chr2 60303317 60303648 -190384206 + LTR10B LTR ERV1 192 505 0 1563 305 101 25 chr2 60303795 60304549 -190383305 - L2 LINE L2 -742 2572 1762 1762 247 85 45 chr2 60304550 60305201 -190382653 + MLT1E1 LTR MaLR 1 542 0 352 270 100 0 chr2 60305315 60305415 -190382439 - L2 LINE L2 -1743 1571 1462 516 276 47 1 chr2 60305419 60305612 -190382242 - L1ME LINE L1 -331 5773 5575 260 172 35 0 chr2 60305672 60305730 -190382124 - L1MC4 LINE L1 -1342 6700 6641 389 315 26 48 chr2 60306222 60306362 -190381492 - L1ME LINE L1 -2986 3143 3010 9064 98 3 25 chr2 60306362 60308520 -190379334 - L1PA8 LINE L1 -13 6159 4033 389 315 26 48 chr2 60308520 60308652 -190379202 - L1ME LINE L1 -3119 3010 2877 483 263 74 77 chr2 60308655 60309076 -190378778 + MLT1F LTR MaLR 1 415 -178 303 276 71 47 chr2 60309125 60309252 -190378602 - L1ME LINE L1 -5019 1100 971 2319 123 31 14 chr2 60310029 60310386 -190377468 + THE1B LTR MaLR 1 363 -1 203 138 0 0 chr2 60310704 60310733 -190377121 + (CA)n Simple_repeat Simple_repeat 2 30 0 691 200 0 0 chr2 60311362 60311492 -190376362 - MLT1C LTR MaLR -2 465 336 1023 233 84 32 chr2 60311549 60311858 -190375996 - MLT1C LTR MaLR -134 333 9 2073 132 3 3 chr2 60312507 60312802 -190375052 - AluSx SINE Alu -15 297 3 562 356 35 9 chr2 60313414 60313644 -190374210 - MIR SINE MIR 0 262 27 22 70 0 0 chr2 60314156 60314199 -190373655 + AT_rich Low_complexity Low_complexity 1 43 0 1092 198 66 0 chr2 60314249 60314492 -190373362 - L1ME3A LINE L1 -72 6098 5840 23 86 0 0 chr2 60314547 60314605 -190373249 + AT_rich Low_complexity Low_complexity 1 58 0 1583 243 98 11 chr2 60317388 60317866 -190369988 - MLT2B1 LTR ERVL 0 520 1 4521 229 58 21 chr2 60318684 60324212 -190363642 + L1MA8 LINE L1 1492 7302 -10 276 77 0 0 chr2 60324854 60324893 -190362961 + (TG)n Simple_repeat Simple_repeat 2 40 0 2565 81 8 11 chr2 60324911 60325281 -190362573 - L1PA8 LINE L1 -1 6171 5803 1999 156 46 7 chr2 60326141 60326552 -190361302 + Tigger2 DNA MER2_type 1 427 -2291 11865 158 33 9 chr2 60326728 60328768 -190359086 + Tigger2 DNA MER2_type 442 2530 -188 869 282 7 29 chr2 60328768 60329041 -190358813 - LTR22A LTR ERVK 0 458 192 311 94 297 0 chr2 60329037 60329101 -190358753 + Tigger2 DNA MER2_type 950 1032 -1686 * 9180 103 24 3 chr2 60329101 60330387 -190357467 - HERVK22 LTR ERVK -983 5854 4542 * 15607 88 8 6 chr2 60330384 60332499 -190355355 - HERVK22 LTR ERVK -2403 4434 2314 4754 127 63 4 chr2 60332482 60333232 -190354622 - HERVK22 LTR ERVK -6043 794 1 * 1883 201 103 15 chr2 60333233 60333700 -190354154 - LTR22 LTR ERVK -1 508 1 924 175 26 11 chr2 60333701 60333890 -190353964 + Tigger2 DNA MER2_type 2526 2717 -1 555 245 7 26 chr2 60333987 60334138 -190353716 + LTR52 LTR ERVL 2 149 -272 195 114 0 0 chr2 60334185 60334220 -190353634 + (A)n Simple_repeat Simple_repeat 1 35 0 677 229 53 12 chr2 60334247 60334417 -190353437 + LTR52 LTR ERVL 228 404 -17 290 333 145 19 chr2 60334607 60334814 -190353040 + MIR SINE MIR 24 256 -6 192 97 0 0 chr2 60335124 60335155 -190352699 + (ATG)n Simple_repeat Simple_repeat 2 32 0 409 338 99 5 chr2 60335161 60335362 -190352492 - MIR SINE MIR 0 262 43 970 71 0 0 chr2 60336900 60337026 -190350828 - AluSg/x SINE Alu -4 306 181 1524 112 52 21 chr2 60337027 60337156 -190350698 - AluSg SINE Alu -70 240 99 440 0 0 0 chr2 60337156 60337208 -190350646 - L1PA3 LINE L1 -3 6152 6101 1524 112 52 21 chr2 60337208 60337311 -190350543 - AluSg SINE Alu -211 99 1 3841 161 20 12 chr2 60337523 60338267 -190349587 - L1MA4 LINE L1 -8 6292 5543 2415 92 0 6 chr2 60338764 60339078 -190348776 - AluSx SINE Alu 0 312 1 660 203 61 61 chr2 60340935 60341181 -190346673 - L1MB8 LINE L1 -1 6177 5932 2786 26 0 0 chr2 60341182 60341493 -190346361 - AluYa5 SINE Alu 0 311 1 2276 264 60 8 chr2 60341545 60342499 -190345355 - L1M4 LINE L1 -2663 3483 2481 215 164 60 0 chr2 60342625 60342692 -190345162 + (TA)n Simple_repeat Simple_repeat 2 72 0 408 111 14 0 chr2 60342710 60342782 -190345072 - L1PA13 LINE L1 -5 6158 6086 11471 184 13 26 chr2 60342785 60344256 -190343598 - L1PA12 LINE L1 -3175 4409 2920 1875 179 38 0 chr2 60344256 60344602 -190343252 + THE1B LTR MaLR 2 360 -4 11471 184 13 26 chr2 60344602 60346356 -190341498 - L1PA12 LINE L1 -4664 2920 1214 1749 131 20 20 chr2 60346370 60346667 -190341187 - THE1C LTR MaLR -78 297 1 9869 127 29 19 chr2 60346667 60347771 -190340083 - THE1C-int LTR MaLR 0 1580 455 2033 164 3 0 chr2 60347771 60348081 -190339773 + AluSx SINE Alu 2 312 0 9869 127 29 19 chr2 60348081 60348538 -190339316 - THE1C-int LTR MaLR -1125 455 4 2023 125 14 14 chr2 60348555 60348852 -190339002 - THE1C LTR MaLR -78 297 1 3744 167 3 69 chr2 60348852 60349578 -190338276 - L1PA12 LINE L1 -6903 678 1 462 294 65 11 chr2 60349881 60350065 -190337789 + MER58A DNA MER1_type 1 194 -30 1841 136 136 9 chr2 60350066 60350398 -190337456 - THE1C LTR MaLR 0 375 2 243 0 0 0 chr2 60351497 60351524 -190336330 + (TA)n Simple_repeat Simple_repeat 2 28 0 2398 55 7 0 chr2 60351525 60351817 -190336037 - AluY SINE Alu -17 294 1 2110 121 7 3 chr2 60352321 60352627 -190335227 - AluSq SINE Alu -6 307 1 390 173 19 69 chr2 60354801 60355178 -190332676 + (TATATG)n Simple_repeat Simple_repeat 1 357 0 293 156 42 0 chr2 60355201 60355297 -190332557 + (TA)n Simple_repeat Simple_repeat 1 100 0 1331 208 23 63 chr2 60355308 60355703 -190332151 + L1MA6 LINE L1 2641 3019 -3127 * 6892 199 37 6 chr2 60355700 60358126 -190329728 + L1MA6 LINE L1 3791 6295 -5 649 276 18 12 chr2 60358250 60358413 -190329441 + MER82 DNA MER2_type 469 632 -21 391 258 86 32 chr2 60358561 60358600 -190329254 + L1MC1 LINE L1 4130 4165 -1981 892 125 12 0 chr2 60358600 60358760 -190329094 + (TA)n Simple_repeat Simple_repeat 2 163 0 391 258 86 32 chr2 60358760 60358906 -190328948 + L1MC1 LINE L1 4165 4325 -1821 339 85 0 0 chr2 60358959 60359006 -190328848 + (CA)n Simple_repeat Simple_repeat 2 48 0 2150 260 26 10 chr2 60359045 60359545 -190328309 - MLT2B3 LTR ERVL -46 508 1 2978 252 34 8 chr2 60359550 60360621 -190327233 + L1MC1 LINE L1 4346 5444 -756 1853 171 131 8 chr2 60360621 60361002 -190326852 + MSTA LTR MaLR 1 428 0 7977 205 28 15 chr2 60361002 60362627 -190325227 + MSTA-int LTR MaLR 1 1646 -5 2318 131 83 8 chr2 60362636 60363034 -190324820 + MSTA LTR MaLR 1 428 0 3016 195 42 22 chr2 60363034 60363425 -190324429 + L1MC1 LINE L1 5440 5853 -480 2131 139 0 0 chr2 60363425 60363727 -190324127 + AluSg SINE Alu 1 302 -8 3016 195 42 22 chr2 60363727 60364049 -190323805 + L1MC1 LINE L1 5853 6167 -166 1920 175 47 10 chr2 60364163 60364568 -190323286 + L1MC1 LINE L1 5914 6333 0 24 53 0 0 chr2 60364673 60364711 -190323143 + AT_rich Low_complexity Low_complexity 1 38 0 436 260 0 0 chr2 60364711 60364811 -190323043 - U13 snRNA snRNA 0 104 5 9917 31 1 0 chr2 60365154 60367109 -190320745 - L1PA3 LINE L1 -3 6152 4196 8450 33 0 1 chr2 60367109 60368128 -190319726 + L1PA3 LINE L1 3187 4204 -1942 42 0 0 0 chr2 60368204 60368246 -190319608 + AT_rich Low_complexity Low_complexity 1 42 0 4505 162 22 53 chr2 60368555 60369029 -190318825 - L1PA16 LINE L1 -3 6163 5676 252 86 0 0 chr2 60369029 60369064 -190318790 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 4505 162 22 53 chr2 60369064 60369148 -190318706 - L1PA16 LINE L1 -490 5676 5591 270 116 0 0 chr2 60369148 60369191 -190318663 + (CA)n Simple_repeat Simple_repeat 2 44 0 4505 162 22 53 chr2 60369191 60369570 -190318284 - L1PA16 LINE L1 -575 5591 5254 968 220 26 11 chr2 60369585 60369904 -190317950 - L1 LINE L1 -2602 3544 3211 4250 70 9 4 chr2 60369905 60370465 -190317389 - L1PA6 LINE L1 0 6154 5592 1536 184 40 3 chr2 60370473 60370777 -190317077 + L1PA15-16 LINE L1 845 1159 -5690 1695 210 44 44 chr2 60370867 60371276 -190316578 + LTR2 LTR ERV1 41 449 0 1725 164 13 3 chr2 60371276 60371581 -190316273 + L1PA15-16 LINE L1 1158 1465 -5384 16655 207 23 12 chr2 60371581 60371607 -190316247 - L1PA15-16 LINE L1 -2924 3925 3901 2084 129 3 0 chr2 60371607 60371909 -190315945 + AluSc SINE Alu 1 303 -6 16655 207 23 12 chr2 60371909 60373410 -190314444 - L1PA15-16 LINE L1 -2948 3901 2417 2262 127 37 8 chr2 60373410 60373764 -190314090 - THE1B LTR MaLR 0 364 1 11049 116 11 0 chr2 60373764 60375327 -190312527 - THE1B-int LTR MaLR 0 1580 1 2361 125 37 6 chr2 60375327 60375680 -190312174 - THE1B LTR MaLR 0 364 1 16655 207 23 12 chr2 60375680 60378019 -190309835 - L1PA15-16 LINE L1 -4431 2418 1 1464 191 0 50 chr2 60378167 60378470 -190309384 + AluJo SINE Alu 13 300 -12 998 204 77 80 chr2 60378780 60379142 -190308712 + MLT1A2 LTR MaLR 1 361 -13 24 32 0 0 chr2 60380599 60380630 -190307224 + AT_rich Low_complexity Low_complexity 1 31 0 348 123 14 27 chr2 60381366 60381439 -190306415 - L1MA4 LINE L1 -1 6299 6228 695 249 98 67 chr2 60381664 60381780 -190306074 + MER97c DNA MER1_type? 11 122 -968 5680 71 3 0 chr2 60381780 60382516 -190305338 - L1PA7 LINE L1 -4 6150 5413 695 249 98 67 chr2 60382516 60382788 -190305066 + MER97c DNA MER1_type? 122 411 -679 29 28 0 0 chr2 60382897 60382933 -190304921 + AT_rich Low_complexity Low_complexity 1 36 0 1109 203 29 4 chr2 60383045 60383326 -190304528 - L1 LINE L1 -743 5403 5116 1103 239 15 0 chr2 60383328 60383596 -190304258 - L1PA13 LINE L1 -3714 3083 2812 959 233 9 0 chr2 60383596 60383828 -190304026 + L1PA15-16 LINE L1 2630 2863 -3986 2629 237 17 23 chr2 60383844 60384502 -190303352 - L1PA13 LINE L1 -4874 1913 1260 667 299 78 54 chr2 60384502 60384836 -190303018 - L1PA13 LINE L1 -6002 785 444 792 166 124 18 chr2 60384836 60385005 -190302849 - HUERS-P2 LTR ERV1 -2104 984 798 2842 175 19 2 chr2 60385007 60385568 -190302286 - L1P4 LINE L1 -380 5786 5217 225 313 54 0 chr2 60385567 60385679 -190302175 + L1P LINE L1 5021 5138 -1008 * 5759 222 42 22 chr2 60385691 60385860 -190301994 - L1 LINE L1 -2640 3688 3524 2160 134 0 0 chr2 60385860 60386158 -190301696 - AluSc SINE Alu -11 298 1 5759 222 42 22 chr2 60386158 60388535 -190299319 - L1 LINE L1 -2804 3524 1196 2069 113 3 22 chr2 60388535 60388853 -190299001 - AluSx SINE Alu 0 312 1 5759 222 42 22 chr2 60388853 60389169 -190298685 - L1 LINE L1 -5132 1196 888 2222 79 7 0 chr2 60389169 60389447 -190298407 - AluY SINE Alu -13 298 19 5759 222 42 22 chr2 60389447 60390185 -190297669 - L1 LINE L1 -5440 888 6 1313 241 30 18 chr2 60390196 60390631 -190297223 - L1 LINE L1 -2365 3781 3342 5033 157 11 2 chr2 60390631 60392178 -190295676 + L1PA13 LINE L1 4610 6161 -2 25 83 0 0 chr2 60392296 60392356 -190295498 + AT_rich Low_complexity Low_complexity 1 60 0 234 322 58 58 chr2 60393184 60393305 -190294549 + L2 LINE L2 3151 3271 -1 714 261 37 14 chr2 60393745 60393963 -190293891 + MER58A DNA MER1_type 2 224 0 313 298 32 32 chr2 60395207 60395331 -190292523 - MIR3 SINE MIR 0 208 85 736 234 107 5 chr2 60396019 60396216 -190291638 - MER20 DNA MER1_type -1 218 2 33 0 0 0 chr2 60396269 60396302 -190291552 + AT_rich Low_complexity Low_complexity 1 33 0 2026 192 15 0 chr2 60396316 60396707 -190291147 - L1PA16 LINE L1 -1 6165 5769 2700 148 25 16 chr2 60398119 60398606 -190289248 - L1PA16 LINE L1 -388 5778 5288 2084 180 16 3 chr2 60398607 60398991 -190288863 - L1PA15 LINE L1 -1 6164 5776 245 205 0 51 chr2 60398991 60399069 -190288785 + L1MC4 LINE L1 6628 6701 -1341 * 482 202 0 0 chr2 60399060 60399154 -190288700 - L1PA15 LINE L1 -374 5791 5698 280 111 0 0 chr2 60399161 60399206 -190288648 - L1 LINE L1 -914 5232 5188 181 198 77 77 chr2 60400377 60400468 -190287386 - L2 LINE L2 -528 2786 2696 405 225 72 36 chr2 60400827 60400965 -190286889 + MIR SINE MIR 120 262 0 372 345 191 5 chr2 60401549 60401758 -190286096 + MIR SINE MIR 5 252 -10 21 89 0 0 chr2 60402832 60402888 -190284966 + AT_rich Low_complexity Low_complexity 1 56 0 282 237 0 0 chr2 60403246 60403322 -190284532 + (TA)n Simple_repeat Simple_repeat 2 77 0 14497 173 48 15 chr2 60403536 60406258 -190281596 - L1MA2 LINE L1 0 7723 5091 1860 135 13 36 chr2 60406258 60406562 -190281292 + AluSx SINE Alu 1 297 -15 14497 173 48 15 chr2 60406562 60410607 -190277247 - L1MA2 LINE L1 -2632 5091 710 992 214 28 14 chr2 60410627 60410842 -190277012 - L1MA2 LINE L1 -7334 231 14 1405 274 96 38 chr2 60411010 60411511 -190276343 + MLT1F LTR MaLR 6 535 -7 235 319 67 37 chr2 60411784 60411919 -190275935 + L2 LINE L2 3172 3310 -3 294 0 0 0 chr2 60412054 60412112 -190275742 + L1PA3 LINE L1 6105 6162 0 21 57 0 0 chr2 60412697 60412732 -190275122 + AT_rich Low_complexity Low_complexity 1 35 0 271 363 56 12 chr2 60413808 60413968 -190273886 + L2 LINE L2 2222 2388 -926 4395 101 2 0 chr2 60414080 60414701 -190273153 - L1P LINE L1 -1681 4465 3844 549 220 73 18 chr2 60414736 60414954 -190272900 + Charlie2 DNA MER1_type 2268 2497 -365 799 219 80 11 chr2 60414976 60415163 -190272691 - LTR69 LTR ERVL 0 588 389 9646 47 8 2 chr2 60415163 60416385 -190271469 - L1P LINE L1 -1774 4372 3144 3695 56 8 2 chr2 60416377 60416861 -190270993 - L1P LINE L1 -4111 2035 1549 * 4638 60 13 2 chr2 60416858 60417476 -190270378 + L1P LINE L1 4388 5012 -1134 248 265 265 0 chr2 60418219 60418317 -190269537 + L2 LINE L2 3182 3305 -8 25 31 0 0 chr2 60420439 60420471 -190267383 + AT_rich Low_complexity Low_complexity 1 32 0 2111 193 18 23 chr2 60420876 60421311 -190266543 + Tigger2a DNA MER2_type 2 434 0 333 342 76 0 chr2 60422170 60422474 -190265380 - L1M4 LINE L1 -2399 3747 3421 338 343 19 0 chr2 60422894 60423002 -190264852 + MER5B DNA MER1_type 69 178 0 256 302 24 71 chr2 60423139 60423265 -190264589 - L2 LINE L2 -21 3292 3173 375 293 71 129 chr2 60423556 60423694 -190264160 - L2 LINE L2 -621 2693 2549 2000 188 43 5 chr2 60423694 60424108 -190263746 - MSTB1 LTR MaLR 0 432 3 375 293 71 129 chr2 60424108 60424356 -190263498 - L2 LINE L2 -765 2549 2349 1526 86 5 0 chr2 60424356 60424578 -190263276 - AluY SINE Alu 0 308 86 375 293 71 129 chr2 60424578 60424780 -190263074 - L2 LINE L2 -965 2349 2137 384 22 0 0 chr2 60425313 60425358 -190262496 + (CA)n Simple_repeat Simple_repeat 2 46 0 1101 177 102 78 chr2 60427724 60428085 -190259769 + THE1C LTR MaLR 1 370 -5 915 169 111 10 chr2 60429513 60429720 -190258134 - L1MDa LINE L1 -4179 2361 2134 438 160 0 152 chr2 60429720 60429845 -190258009 - Tigger7 DNA MER2_type 0 2491 2386 1067 251 13 4 chr2 60429858 60430085 -190257769 - Tigger7 DNA MER2_type -503 230 2 381 157 14 14 chr2 60430112 60430182 -190257672 + Tigger5 DNA MER2_type 2254 2323 0 589 151 0 0 chr2 60430236 60430322 -190257532 + Tigger5 DNA MER2_type 2238 2323 0 278 168 131 47 chr2 60430322 60430429 -190257425 - L1MDa LINE L1 -4405 2135 2020 27 0 0 0 chr2 60430432 60430459 -190257395 + AT_rich Low_complexity Low_complexity 1 27 0 3634 212 117 28 chr2 60430459 60431666 -190256188 - L1MDa LINE L1 -4500 2040 383 294 29 0 0 chr2 60431666 60431701 -190256153 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3634 212 117 28 chr2 60431701 60431794 -190256060 - L1MDa LINE L1 -6157 383 300 261 0 0 0 chr2 60431861 60431890 -190255964 + (TG)n Simple_repeat Simple_repeat 1 29 0 229 349 0 12 chr2 60431894 60431977 -190255877 - L1MDa LINE L1 -6271 269 188 6643 193 105 40 chr2 60431977 60433573 -190254281 - MER52A LTR ERV1 0 1755 56 756 222 49 16 chr2 60433989 60434174 -190253680 - L1MDa LINE L1 -6349 191 1 264 260 137 34 chr2 60434167 60434313 -190253541 - L1ME LINE L1 -351 5815 5655 * 1623 138 6 63 chr2 60434314 60434633 -190253221 - MER50 LTR ERV1 0 734 434 1199 142 36 18 chr2 60434622 60434841 -190253013 - MER50 LTR ERV1 -500 234 12 * 414 285 28 42 chr2 60434846 60435060 -190252794 - L1ME LINE L1 -508 5658 5448 6004 212 110 41 chr2 60435545 60437853 -190250001 - L1MA3 LINE L1 -3 7721 5202 1355 51 11 0 chr2 60437853 60438030 -190249824 - L1PA4 LINE L1 0 6155 5977 6004 212 110 41 chr2 60438030 60438216 -190249638 - L1MA3 LINE L1 -2522 5202 5030 22 56 0 0 chr2 60438642 60438678 -190249176 + AT_rich Low_complexity Low_complexity 1 36 0 1960 151 0 0 chr2 60438786 60439085 -190248769 - AluSx SINE Alu -11 301 3 330 329 39 62 chr2 60439278 60439615 -190248239 - HAL1 LINE L1 -1095 1412 1084 194 342 26 13 chr2 60439817 60439893 -190247961 - L2 LINE L2 -313 3000 2924 2125 31 0 12 chr2 60440343 60440601 -190247253 - AluY SINE Alu -7 304 50 43 35 0 0 chr2 60440738 60440795 -190247059 + AT_rich Low_complexity Low_complexity 1 57 0 7711 202 41 19 chr2 60440798 60442270 -190245584 - L1MA3 LINE L1 -5968 1597 89 300 27 0 0 chr2 60442270 60442307 -190245547 + (TG)n Simple_repeat Simple_repeat 2 38 0 7711 202 41 19 chr2 60442307 60442386 -190245468 - L1MA3 LINE L1 -7476 89 13 1142 242 96 22 chr2 60442957 60443415 -190244439 + L1M3c LINE L1 984 1475 -4666 1520 146 8 4 chr2 60443415 60443661 -190244193 + AluSq SINE Alu 61 307 -6 395 177 177 0 chr2 60443661 60443703 -190244151 + L1MA8 LINE L1 6127 6160 -131 207 0 0 0 chr2 60443703 60443726 -190244128 + (ATGTG)n Simple_repeat Simple_repeat 3 25 0 395 177 177 0 chr2 60443726 60443813 -190244041 + L1MA8 LINE L1 6160 6279 -12 467 347 148 34 chr2 60444266 60444882 -190242972 - L3 LINE CR1 -7 1570 885 4174 26 0 18 chr2 60445127 60445634 -190242220 - L1PA4 LINE L1 -2 6153 5656 3985 45 32 0 chr2 60445634 60446141 -190241713 + L1P LINE L1 4465 4987 -1159 13787 162 33 21 chr2 60446487 60451975 -190235879 - L1MA1 LINE L1 0 7721 2155 5043 178 6 2 chr2 60451974 60452908 -190234946 - L1P LINE L1 -3085 3061 2124 * 414 0 0 0 chr2 60453356 60453402 -190234452 + (TA)n Simple_repeat Simple_repeat 1 46 0 1489 239 85 61 chr2 60453681 60454292 -190233562 + MLT1E2 LTR MaLR 1 626 0 306 65 22 0 chr2 60454387 60454433 -190233421 + MADE1 DNA Mariner 1 47 -33 1726 128 11 117 chr2 60454447 60454805 -190233049 + MER1B DNA MER1_type 1 320 -19 243 200 0 116 chr2 60454801 60454896 -190232958 - Charlie3 DNA MER1_type -2626 84 1 * 318 320 78 25 chr2 60455829 60456110 -190231744 - L1M4 LINE L1 -2977 3169 2874 13016 147 20 2 chr2 60457052 60459188 -190228666 - Tigger1 DNA MER2_type 0 2418 246 453 185 12 0 chr2 60459188 60459269 -190228585 - Tigger1 DNA MER2_type -2336 82 1 * 633 227 0 8 chr2 60459268 60459396 -190228458 - MLT1C LTR MaLR -1 466 340 515 165 28 0 chr2 60459417 60459526 -190228328 - L1MA7 LINE L1 -72 6219 6108 521 146 0 0 chr2 60459542 60459638 -190228216 + L1MA7 LINE L1 6195 6290 -1 1122 238 46 35 chr2 60459667 60459883 -190227971 - MLT1C LTR MaLR -118 349 126 2245 134 50 3 chr2 60459883 60460241 -190227613 + THE1C LTR MaLR 1 375 0 1122 238 46 35 chr2 60460241 60460369 -190227485 - MLT1C LTR MaLR -341 126 1 357 290 81 19 chr2 60460369 60460679 -190227175 - L1M4 LINE L1 -1654 5303 4975 271 266 150 0 chr2 60461070 60461183 -190226671 - L1MEc LINE L1 -5352 1507 1378 250 370 94 0 chr2 60461675 60461878 -190225976 - L1MEc LINE L1 -6066 1072 851 183 42 0 0 chr2 60462391 60462415 -190225439 + (TTA)n Simple_repeat Simple_repeat 1 24 0 26 0 0 0 chr2 60463881 60463907 -190223947 + AT_rich Low_complexity Low_complexity 1 26 0 336 94 0 0 chr2 60464160 60464213 -190223641 + (TC)n Simple_repeat Simple_repeat 2 54 0 2903 6 0 0 chr2 60464253 60464571 -190223283 - AluYb8 SINE Alu 0 318 1 260 128 0 0 chr2 60464586 60464625 -190223229 + MLT1D LTR MaLR 467 505 0 280 103 0 0 chr2 60464668 60464707 -190223147 + MLT1D LTR MaLR 467 505 0 2237 246 39 11 chr2 60464707 60465349 -190222505 + MLT1D-int LTR MaLR 1 660 -711 409 292 8 31 chr2 60465399 60465529 -190222325 + MLT1D-int LTR MaLR 659 785 -586 716 212 18 96 chr2 60465546 60465587 -190222267 + MLT1D LTR MaLR 242 285 -220 1139 100 211 0 chr2 60465587 60465777 -190222077 - MER30 DNA MER1_type 0 230 1 716 212 18 96 chr2 60465777 60466001 -190221853 + MLT1D LTR MaLR 285 505 0 261 346 28 0 chr2 60467847 60467954 -190219900 - MIR SINE MIR -85 177 68 21 0 0 0 chr2 60468575 60468596 -190219258 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr2 60468872 60468895 -190218959 + (TG)n Simple_repeat Simple_repeat 2 24 0 397 218 47 6 chr2 60468915 60469085 -190218769 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 1671 164 75 3 chr2 60469096 60469431 -190218423 + MER46B DNA MER2_type 3 236 0 210 208 0 0 chr2 60469448 60469496 -190218358 + (CATA)n Simple_repeat Simple_repeat 1 48 0 13933 156 21 7 chr2 60469647 60472030 -190215824 - Tigger1 DNA MER2_type 0 2418 2 286 220 44 25 chr2 60472036 60472195 -190215659 + (TATAA)n Simple_repeat Simple_repeat 3 164 0 33 0 0 0 chr2 60472444 60472477 -190215377 + AT_rich Low_complexity Low_complexity 1 33 0 297 0 0 0 chr2 60473228 60473261 -190214593 + (CA)n Simple_repeat Simple_repeat 2 34 0 324 302 82 52 chr2 60473326 60473558 -190214296 - L1ME4a LINE L1 -213 5908 5670 343 216 17 0 chr2 60474091 60474207 -190213647 + (TA)n Simple_repeat Simple_repeat 1 118 0 328 247 72 0 chr2 60474878 60474975 -190212879 + MER112 DNA MER1_type 146 249 -11 5768 177 35 12 chr2 60476492 60477652 -190210202 - L1MC1 LINE L1 -1 6750 5564 2240 129 0 0 chr2 60477652 60477963 -190209891 + AluSx SINE Alu 2 312 0 5768 177 35 12 chr2 60477963 60478064 -190209790 - L1MC1 LINE L1 -1187 5564 5467 2283 278 40 17 chr2 60478064 60479804 -190208050 - L1MC1 LINE L1 -2120 4444 2558 5533 177 20 10 chr2 60479828 60481831 -190206023 - L1PB3 LINE L1 0 6154 4132 937 265 65 40 chr2 60481828 60482581 -190205273 - L1MC1 LINE L1 -4124 2621 1829 * 320 192 0 0 chr2 60482588 60482640 -190205214 - MLT1C LTR MaLR 0 467 416 * 829 181 44 58 chr2 60482637 60482863 -190204991 - MLT1C LTR MaLR -244 223 1 540 249 109 56 chr2 60482888 60483245 -190204609 - L1MC1 LINE L1 -4928 1636 1261 * 698 300 19 36 chr2 60483217 60483524 -190204330 - L1MC1 LINE L1 -5780 265 5 26 30 0 0 chr2 60483970 60484003 -190203851 + AT_rich Low_complexity Low_complexity 1 33 0 221 234 0 0 chr2 60484154 60484201 -190203653 + CT-rich Low_complexity Low_complexity 2 48 0 23 33 0 0 chr2 60484757 60484787 -190203067 + AT_rich Low_complexity Low_complexity 1 30 0 1098 126 75 0 chr2 60485441 60485642 -190202212 - AluSg/x SINE Alu 0 308 95 2232 108 3 0 chr2 60486510 60486817 -190201037 + AluSx SINE Alu 2 309 -3 23 0 0 0 chr2 60486920 60486943 -190200911 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr2 60488717 60488750 -190199104 + AT_rich Low_complexity Low_complexity 1 33 0 1162 245 48 57 chr2 60489153 60489524 -190198330 + MER87 LTR ERV1 174 541 0 398 299 73 2 chr2 60489590 60489752 -190198102 + MLT1E LTR MaLR 19 189 -378 570 207 69 0 chr2 60490314 60490430 -190197424 - FLAM_A SINE Alu -9 124 1 197 400 11 0 chr2 60490615 60490710 -190197144 - MER5A DNA MER1_type -28 161 66 25 0 0 0 chr2 60490865 60490890 -190196964 + AT_rich Low_complexity Low_complexity 1 25 0 1530 178 107 24 chr2 60492215 60492553 -190195301 - MER47A DNA MER2_type 0 366 1 833 323 103 22 chr2 60492583 60493206 -190194648 + HAL1 LINE L1 68 740 -1767 5274 236 76 29 chr2 60493267 60494642 -190193212 + L1M2 LINE L1 3 1441 -5408 23504 162 28 27 chr2 60494903 60496149 -190191705 + L1PA10 LINE L1 10 1254 -5229 189 0 0 0 chr2 60496149 60496170 -190191684 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 23504 162 28 27 chr2 60496170 60498359 -190189495 + L1PA10 LINE L1 1254 3441 -3042 2473 55 7 7 chr2 60498359 60498668 -190189186 + AluY SINE Alu 1 309 -2 23504 162 28 27 chr2 60498668 60501702 -190186152 + L1PA10 LINE L1 3441 6479 -4 24 0 0 0 chr2 60503448 60503472 -190184382 + AT_rich Low_complexity Low_complexity 1 24 0 428 307 98 40 chr2 60503586 60503637 -190184217 + L1MCc LINE L1 3 50 -6373 2096 201 31 2 chr2 60503637 60504051 -190183803 - MSTB LTR MaLR 0 426 1 8387 198 8 13 chr2 60504051 60505710 -190182144 - MSTB-int LTR MaLR 0 1651 1 2293 160 43 26 chr2 60505710 60506129 -190181725 - MSTB LTR MaLR 0 426 1 428 307 98 40 chr2 60506129 60506472 -190181382 + L1MCc LINE L1 49 422 -6001 180 0 0 0 chr2 60506589 60506609 -190181245 + (TTG)n Simple_repeat Simple_repeat 2 21 0 542 244 143 16 chr2 60507013 60507165 -190180689 + L1MCc LINE L1 1101 1232 -5191 198 0 0 0 chr2 60507165 60507187 -190180667 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 542 244 143 16 chr2 60507187 60507292 -190180562 + L1MCc LINE L1 1232 1391 -5032 193 365 14 0 chr2 60509091 60509165 -190178689 - L2 LINE L2 -317 2955 2881 1463 213 82 27 chr2 60509522 60509963 -190177891 - LTR40c LTR ERVL 0 465 1 1798 229 86 50 chr2 60510099 60510759 -190177095 - LTR68 LTR ERV1 0 740 8 236 347 114 20 chr2 60510781 60511026 -190176828 - L2 LINE L2 -13 3300 3033 383 219 21 42 chr2 60511120 60511216 -190176638 + L2 LINE L2 3220 3313 0 188 333 71 12 chr2 60511233 60511317 -190176537 - L2 LINE L2 -244 3028 2940 442 350 131 31 chr2 60511397 60511521 -190176333 - L2 LINE L2 -575 2739 2629 2203 89 3 16 chr2 60511521 60511834 -190176020 + AluSc SINE Alu 1 309 0 442 350 131 31 chr2 60511834 60512526 -190175328 - L2 LINE L2 -685 2629 1841 187 348 26 43 chr2 60513740 60513855 -190173999 - MIR SINE MIR -62 200 88 377 315 34 39 chr2 60514544 60514722 -190173132 - MER5B DNA MER1_type -1 177 1 1428 152 16 0 chr2 60515144 60515400 -190172454 - L1MA5A LINE L1 -4 6293 6034 183 132 44 29 chr2 60516251 60516319 -190171535 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 22 0 0 0 chr2 60516475 60516497 -190171357 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 60517420 60517448 -190170406 + AT_rich Low_complexity Low_complexity 1 28 0 595 255 92 41 chr2 60517641 60518231 -190169623 - Charlie2 DNA MER1_type -342 2520 1856 413 308 8 8 chr2 60518311 60518441 -190169413 - Charlie2 DNA MER1_type -2705 157 28 697 98 8 45 chr2 60518492 60518625 -190169229 + AluSg/x SINE Alu 185 312 0 182 337 86 49 chr2 60519986 60520149 -190167705 + MIR SINE MIR 2 170 -92 224 217 275 0 chr2 60520612 60520681 -190167173 - MER5B DNA MER1_type -89 89 2 5470 169 19 23 chr2 60520778 60521214 -190166640 + L1MA4 LINE L1 4859 5295 -1005 206 0 0 65 chr2 60521214 60521245 -190166609 + (TAA)n Simple_repeat Simple_repeat 2 30 0 5470 169 19 23 chr2 60521245 60522160 -190165694 + L1MA4 LINE L1 5295 6199 -101 2054 131 0 22 chr2 60522160 60522472 -190165382 - AluSx SINE Alu -7 305 1 5470 169 19 23 chr2 60522472 60522569 -190165285 + L1MA4 LINE L1 6199 6295 -5 235 179 51 26 chr2 60522572 60522650 -190165204 + (TATAA)n Simple_repeat Simple_repeat 5 84 0 247 320 80 10 chr2 60522978 60523078 -190164776 + L2 LINE L2 3150 3256 -16 2005 126 7 16 chr2 60525047 60525357 -190162497 - AluSx SINE Alu -5 307 1 688 226 14 97 chr2 60525357 60525574 -190162280 - MER20 DNA MER1_type -20 199 1 23 33 0 0 chr2 60527440 60527470 -190160384 + AT_rich Low_complexity Low_complexity 1 30 0 4040 102 7 13 chr2 60527471 60528086 -190159768 - L1MA2 LINE L1 0 6304 5694 26 0 0 0 chr2 60528516 60528542 -190159312 + AT_rich Low_complexity Low_complexity 1 26 0 1145 321 92 11 chr2 60528735 60529212 -190158642 + Zaphod DNA AcHobo 1 516 -3515 1977 219 60 70 chr2 60529227 60530081 -190157773 + Zaphod DNA AcHobo 2730 3574 -457 755 237 29 2 chr2 60530092 60530283 -190157571 + L1ME1 LINE L1 5980 6332 -2 621 260 108 10 chr2 60530358 60530646 -190157208 + Zaphod DNA AcHobo 3577 3892 -139 1503 196 20 68 chr2 60530714 60531111 -190156743 - L1MA10 LINE L1 -50 6284 5907 447 206 114 15 chr2 60531111 60531242 -190156612 + Zaphod DNA AcHobo 3888 4031 0 205 325 83 47 chr2 60531282 60531451 -190156403 + L3 LINE CR1 1338 1512 -65 359 388 67 9 chr2 60531528 60531752 -190156102 - MIR SINE MIR -7 255 19 5918 160 42 42 chr2 60531936 60533206 -190154648 + MER41-int LTR ERV1 3573 4842 -1104 187 245 176 29 chr2 60533206 60533308 -190154546 + L3 LINE CR1 1180 1296 -281 7361 200 108 16 chr2 60533314 60535424 -190152430 + L1PA16 LINE L1 2761 5257 -909 1155 68 0 0 chr2 60535424 60535572 -190152282 + L1PA10 LINE L1 6019 6166 -2 7361 200 108 16 chr2 60535572 60536572 -190151282 + L1PA16 LINE L1 5257 6164 -2 219 36 0 0 chr2 60537635 60537663 -190150191 + (CA)n Simple_repeat Simple_repeat 2 29 0 207 253 81 11 chr2 60538207 60538294 -190149560 - MIR SINE MIR -52 210 118 468 235 0 0 chr2 60538462 60538560 -190149294 - MIR SINE MIR -49 213 116 260 309 94 7 chr2 60539221 60539370 -190148484 - L2 LINE L2 -1265 2049 1888 413 75 99 0 chr2 60539440 60539601 -190148253 + (TA)n Simple_repeat Simple_repeat 2 178 0 25 51 0 0 chr2 60539601 60539640 -190148214 + AT_rich Low_complexity Low_complexity 1 39 0 407 96 96 3 chr2 60539645 60539969 -190147885 + (TA)n Simple_repeat Simple_repeat 1 354 0 220 102 66 36 chr2 60539993 60540160 -190147694 + (TATAG)n Simple_repeat Simple_repeat 4 175 0 307 115 42 42 chr2 60540190 60540355 -190147499 + (TATAA)n Simple_repeat Simple_repeat 5 169 0 432 119 100 0 chr2 60540356 60540516 -190147338 + (TA)n Simple_repeat Simple_repeat 2 177 0 428 136 93 0 chr2 60540564 60540726 -190147128 + (TA)n Simple_repeat Simple_repeat 2 178 0 406 74 105 0 chr2 60540750 60540912 -190146942 + (TA)n Simple_repeat Simple_repeat 1 179 0 1899 117 58 102 chr2 60540912 60541381 -190146473 + LTR7 LTR ERV1 1 448 -2 1497 74 0 0 chr2 60541383 60541585 -190146269 + HERVH LTR ERV1 1 202 -7511 220 91 76 0 chr2 60541609 60541675 -190146179 + (TA)n Simple_repeat Simple_repeat 1 71 0 1899 117 58 102 chr2 60541675 60542144 -190145710 + LTR7 LTR ERV1 1 448 -2 15572 99 22 22 chr2 60542146 60545012 -190142842 + HERVH LTR ERV1 1 2987 -4726 866 149 20 0 chr2 60545006 60545154 -190142700 + HERVH LTR ERV1 3140 3290 -4423 * 3201 115 14 2 chr2 60545144 60545640 -190142214 + HERVH LTR ERV1 3492 3993 -3720 4176 149 5 6 chr2 60545642 60546305 -190141549 + HERVH LTR ERV1 4488 5149 -2564 1329 136 18 9 chr2 60546302 60546523 -190141331 + HERVH LTR ERV1 5597 5819 -1894 * 2484 78 44 21 chr2 60546521 60546904 -190140950 + HERVH LTR ERV1 7322 7713 0 1998 118 77 59 chr2 60546904 60547344 -190140510 + LTR7 LTR ERV1 1 448 -2 22 0 0 0 chr2 60547344 60547366 -190140488 + AT_rich Low_complexity Low_complexity 1 22 0 1887 147 10 10 chr2 60547366 60547666 -190140188 - AluSx SINE Alu -12 300 1 446 295 143 32 chr2 60548496 60548713 -190139141 + MIR SINE MIR 13 253 -9 343 295 248 0 chr2 60549377 60549506 -190138348 + MER5A DNA MER1_type 26 186 -3 303 186 93 121 chr2 60550795 60550935 -190136919 + MER5B DNA MER1_type 36 171 -7 2695 20 0 0 chr2 60551481 60551785 -190136069 + AluY SINE Alu 1 304 -7 1985 156 0 3 chr2 60551834 60552141 -190135713 - AluSx SINE Alu -6 306 1 303 71 0 0 chr2 60552723 60552765 -190135089 + (TA)n Simple_repeat Simple_repeat 1 42 0 623 286 56 14 chr2 60554129 60554503 -190133351 + LTR16A LTR ERVL 18 450 0 422 327 128 0 chr2 60554503 60554659 -190133195 + HERV16 LTR ERVL 1 176 -4820 2127 341 77 15 chr2 60554835 60555946 -190131908 + HERV16 LTR ERVL 394 1572 -3424 1311 278 27 32 chr2 60555991 60556397 -190131457 + HERV16 LTR ERVL 1688 2091 -2905 1988 310 27 26 chr2 60556448 60557189 -190130665 + HERV16 LTR ERVL 2267 3008 -1988 26 50 0 0 chr2 60557407 60557447 -190130407 + AT_rich Low_complexity Low_complexity 1 40 0 220 259 22 22 chr2 60557447 60557582 -190130272 + (TA)n Simple_repeat Simple_repeat 1 135 0 519 266 49 14 chr2 60558887 60559030 -190128824 - MER5B DNA MER1_type -4 174 27 21 36 0 0 chr2 60559548 60559576 -190128278 + AT_rich Low_complexity Low_complexity 1 28 0 2425 64 0 10 chr2 60559821 60560133 -190127721 - AluY SINE Alu -2 309 1 269 270 68 0 chr2 60560620 60560694 -190127160 + MIR3 SINE MIR 106 184 -24 573 265 240 0 chr2 60561349 60561549 -190126305 + MIR SINE MIR 2 249 -13 237 65 0 0 chr2 60561723 60561754 -190126100 + (T)n Simple_repeat Simple_repeat 1 31 0 221 193 18 18 chr2 60562212 60562269 -190125585 + (TGAA)n Simple_repeat Simple_repeat 3 59 0 2138 114 10 0 chr2 60562361 60562650 -190125204 - AluY SINE Alu -17 294 3 4929 129 35 3 chr2 60762875 60763641 -189924213 - L1P LINE L1 -5355 791 1 6545 244 21 3 chr2 60763644 60765090 -189922764 + MSTB1-int LTR MaLR 138 1610 -41 2275 190 24 0 chr2 60765129 60765551 -189922303 + MSTB1 LTR MaLR 1 432 0 5026 187 27 14 chr2 60765551 60767396 -189920458 + L1MA4 LINE L1 4363 6227 -73 2174 178 5 3 chr2 60767407 60767790 -189920064 + Tigger2 DNA MER2_type 2335 2718 0 29 28 0 0 chr2 60768304 60768340 -189919514 + AT_rich Low_complexity Low_complexity 1 36 0 3617 19 0 0 chr2 60768721 60769140 -189918714 - L1PA3 LINE L1 0 6155 5737 26791 30 1 1 chr2 60769140 60772755 -189915099 + L1PA3 LINE L1 2126 5737 -418 189 74 0 0 chr2 60773104 60773131 -189914723 + (TTG)n Simple_repeat Simple_repeat 2 28 0 375 280 57 31 chr2 60773262 60773455 -189914399 - HAL1b LINE L1 -489 859 662 241 282 0 0 chr2 60773813 60773884 -189913970 + L1MEc LINE L1 2240 2310 -4086 469 301 78 29 chr2 60774064 60774410 -189913444 + L1MEc LINE L1 2577 2939 -3276 2140 119 114 5 chr2 60774822 60775208 -189912646 - MSTA LTR MaLR 0 428 1 182 227 27 136 chr2 60775716 60775791 -189912063 + MER5C DNA MER1_type 7 68 -256 383 88 118 0 chr2 60775791 60775859 -189911995 - MADE1 DNA Mariner 0 80 5 182 227 27 136 chr2 60775859 60775893 -189911961 + MER5C DNA MER1_type 68 104 -220 2043 103 0 4 chr2 60776313 60776585 -189911269 + AluSx SINE Alu 25 295 -17 300 98 0 0 chr2 60776909 60776950 -189910904 - U2 snRNA snRNA -147 41 1 243 88 0 0 chr2 60777172 60777206 -189910648 + (TA)n Simple_repeat Simple_repeat 1 34 0 304 285 117 7 chr2 60777291 60777428 -189910426 + L1ME4a LINE L1 5512 5663 -458 309 286 125 5 chr2 60777461 60777653 -189910201 + L1ME4a LINE L1 5708 5922 -199 266 315 87 16 chr2 60777677 60777861 -189909993 + L1ME2 LINE L1 597 793 -5326 1997 196 92 11 chr2 60777988 60778436 -189909418 + LTR42 LTR ERVL 1 484 -11 192 40 0 0 chr2 60778484 60778509 -189909345 + (CA)n Simple_repeat Simple_repeat 2 26 0 2391 167 68 58 chr2 60778658 60779257 -189908597 - MER6A DNA MER2_type 0 605 1 296 304 118 6 chr2 60779896 60780057 -189907797 - MIR SINE MIR 0 262 84 295 323 44 35 chr2 60780483 60780799 -189907055 + L1ME2 LINE L1 3866 4184 -1945 22 35 0 0 chr2 60781456 60781485 -189906369 + AT_rich Low_complexity Low_complexity 1 29 0 1005 214 41 73 chr2 60781790 60781892 -189905962 - LTR40b LTR ERVL -83 379 275 2226 104 3 0 chr2 60781892 60782190 -189905664 - AluSp SINE Alu -13 300 2 1005 214 41 73 chr2 60782190 60782404 -189905450 - LTR40b LTR ERVL -187 275 73 1815 245 37 16 chr2 60782949 60783459 -189904395 + L1MD3 LINE L1 7422 7942 -53 286 265 71 0 chr2 60783819 60783917 -189903937 + MLT1F LTR MaLR 264 368 -174 2181 107 3 0 chr2 60784457 60784756 -189903098 + AluSp SINE Alu 3 302 -11 21 0 0 0 chr2 60785215 60785236 -189902618 + AT_rich Low_complexity Low_complexity 1 21 0 316 272 58 29 chr2 60785382 60785625 -189902229 + L1ME2 LINE L1 4147 4396 -1733 * 1121 282 114 32 chr2 60785618 60786207 -189901647 + L1ME2 LINE L1 5405 6041 -106 423 228 83 62 chr2 60786246 60786439 -189901415 + L1MC4 LINE L1 6353 6549 -1493 1023 249 40 11 chr2 60786466 60786773 -189901081 + L1MC4 LINE L1 6703 7067 -782 442 173 12 0 chr2 60786865 60786946 -189900908 + LTR9 LTR ERV1 3 84 -528 963 279 92 18 chr2 60786956 60787444 -189900410 + L1ME3A LINE L1 4748 5271 -875 984 181 43 38 chr2 60787448 60787658 -189900196 + L1PB4 LINE L1 5942 6152 -4 944 298 146 14 chr2 60787761 60788455 -189899399 + L1ME3A LINE L1 5374 6158 -12 22 0 0 0 chr2 60788585 60788607 -189899247 + AT_rich Low_complexity Low_complexity 1 22 0 231 365 77 12 chr2 60789610 60789780 -189898074 + MIR3 SINE MIR 21 201 -7 2767 110 14 5 chr2 60790093 60790531 -189897323 + L1MA5A LINE L1 5853 6294 -3 368 180 23 8 chr2 60790606 60790734 -189897120 + (TA)n Simple_repeat Simple_repeat 1 130 0 2369 58 0 3 chr2 60792099 60792394 -189895460 + AluY SINE Alu 2 295 -16 2079 125 3 0 chr2 60792618 60792913 -189894941 - AluSx SINE Alu -16 296 1 204 390 0 0 chr2 60793055 60793137 -189894717 - L2 LINE L2 0 3313 3232 16757 36 10 0 chr2 60793243 60796027 -189891827 + L1PA4 LINE L1 3360 6152 -3 23 0 0 0 chr2 60796027 60796050 -189891804 + AT_rich Low_complexity Low_complexity 1 23 0 468 276 91 32 chr2 60796063 60796371 -189891483 + L1ME LINE L1 3991 4316 -1830 474 175 22 95 chr2 60796402 60796539 -189891315 - FLAM_A SINE Alu -1 141 15 760 238 63 34 chr2 60796539 60796888 -189890966 + L1ME LINE L1 4363 4721 -1425 534 241 9 0 chr2 60797260 60797368 -189890486 + MER70B LTR ERVL 462 570 -8 451 284 92 51 chr2 60797415 60797806 -189890048 + L1ME LINE L1 4803 5209 -937 462 264 191 11 chr2 60797808 60797986 -189889868 + L1MC3 LINE L1 6737 6946 -839 189 0 0 0 chr2 60797986 60798007 -189889847 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 324 248 10 20 chr2 60798019 60798120 -189889734 + L1ME LINE L1 5736 5835 -331 330 322 41 8 chr2 60798512 60798633 -189889221 - L2 LINE L2 -9 3304 3180 306 225 0 0 chr2 60799253 60799333 -189888521 + (TATATG)n Simple_repeat Simple_repeat 3 82 0 2155 224 16 50 chr2 60800234 60800785 -189887069 + MLT2B3 LTR ERVL 1 486 -34 234 105 0 0 chr2 60800785 60800823 -189887031 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 232 158 88 18 chr2 60800823 60800880 -189886974 + MLT2B3 LTR ERVL 458 518 -2 * 559 198 24 0 chr2 60800880 60801003 -189886851 + MER63 DNA MER1_type 74 199 -731 734 159 0 61 chr2 60801005 60801168 -189886686 - L1MA9 LINE L1 -1 6311 6159 264 216 81 54 chr2 60801344 60801455 -189886399 - L3 LINE CR1 -288 1289 1176 239 341 60 60 chr2 60801712 60801961 -189885893 + MIR SINE MIR 1 249 -13 394 386 79 29 chr2 60802029 60802449 -189885405 + L1MEc LINE L1 99 539 -5857 315 223 38 105 chr2 60802496 60802734 -189885120 + L1MEc LINE L1 882 1103 -5293 2904 222 63 4 chr2 60802806 60803581 -189884273 - L1P LINE L1 -2852 3294 2474 8634 196 40 13 chr2 60803581 60804920 -189882934 + L1PA15 LINE L1 1440 2742 -3921 255 31 0 0 chr2 60804920 60804952 -189882902 + (TC)n Simple_repeat Simple_repeat 2 33 0 200 59 29 0 chr2 60804951 60804985 -189882869 + (TA)n Simple_repeat Simple_repeat 1 35 0 * 8634 196 40 13 chr2 60804952 60806681 -189881173 + L1PA15 LINE L1 2742 6663 0 1886 122 20 0 chr2 60806684 60806979 -189880875 + L1MA2 LINE L1 6004 6304 0 3713 67 3 9 chr2 60807057 60807763 -189880091 - L1PA8A LINE L1 -398 5733 5034 2623 87 18 5 chr2 60807763 60808153 -189879701 + L1PA8A LINE L1 5736 6130 -1 830 304 90 21 chr2 60808535 60809067 -189878787 - L1M4 LINE L1 -1971 4175 3607 264 282 19 7 chr2 60809279 60809410 -189878444 + L1ME2 LINE L1 1788 1961 -4630 640 275 89 52 chr2 60809660 60810794 -189877060 + L1ME2 LINE L1 2132 3276 -3264 310 274 10 20 chr2 60810812 60810914 -189876940 + L1ME2 LINE L1 5348 5448 -1092 189 0 0 0 chr2 60811064 60811085 -189876769 + (CA)n Simple_repeat Simple_repeat 2 22 0 180 111 0 0 chr2 60811084 60811111 -189876743 + (TATATG)n Simple_repeat Simple_repeat 3 29 0 * 201 178 14 41 chr2 60811135 60811208 -189876646 + (TA)n Simple_repeat Simple_repeat 1 71 0 309 159 12 74 chr2 60811236 60811399 -189876455 + (TA)n Simple_repeat Simple_repeat 1 153 0 1365 230 46 114 chr2 60811399 60812230 -189875624 + L1ME2 LINE L1 5769 6542 -16 192 125 0 0 chr2 60812232 60812264 -189875590 + (GGA)n Simple_repeat Simple_repeat 3 34 0 7301 37 1 1 chr2 60812613 60814045 -189873809 + L1PA5 LINE L1 4707 6138 -16 2302 40 0 0 chr2 60813770 60814045 -189873809 + L1PA5 LINE L1 5864 6181 0 367 23 0 0 chr2 60814045 60814088 -189873766 + (TAAA)n Simple_repeat Simple_repeat 3 176 0 3306 208 10 13 chr2 60814605 60815317 -189872537 + MER67C LTR ERV1 1 710 0 195 380 35 21 chr2 60816241 60816383 -189871471 + MIR3 SINE MIR 16 159 -49 307 260 48 10 chr2 60817385 60817489 -189870365 + HAL1b LINE L1 1232 1339 -9 200 194 0 0 chr2 60817491 60817527 -189870327 + (TG)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr2 60818166 60818187 -189869667 + AT_rich Low_complexity Low_complexity 1 21 0 390 139 0 0 chr2 60819607 60819679 -189868175 + (TC)n Simple_repeat Simple_repeat 2 73 0 32 86 0 0 chr2 60819879 60819960 -189867894 + AT_rich Low_complexity Low_complexity 1 81 0 1622 103 47 0 chr2 60820323 60820555 -189867299 + AluSc SINE Alu 67 309 0 24 77 0 0 chr2 60820716 60820768 -189867086 + AT_rich Low_complexity Low_complexity 1 52 0 30 27 0 0 chr2 60820793 60820830 -189867024 + AT_rich Low_complexity Low_complexity 1 37 0 2189 78 0 0 chr2 60820836 60821104 -189866750 - AluSq SINE Alu -45 268 1 511 184 56 32 chr2 60821289 60821414 -189866440 + FLAM_A SINE Alu 10 137 -5 22 35 0 0 chr2 60821496 60821525 -189866329 + AT_rich Low_complexity Low_complexity 1 29 0 1381 68 0 26 chr2 60821802 60821994 -189865860 + pTR5 LTR ERV1 1839 2025 -413 264 179 0 0 chr2 60821994 60822050 -189865804 + LTR30 LTR ERV1 544 599 -123 285 231 13 0 chr2 60822051 60822129 -189865725 + LTR30 LTR ERV1 564 642 -80 2439 72 0 12 chr2 60822129 60822460 -189865394 + pTR5 LTR ERV1 66 392 -2046 483 220 17 8 chr2 60822557 60822675 -189865179 - L1MA6 LINE L1 0 6300 6182 1486 211 71 33 chr2 60822675 60823069 -189864785 - MSTB1 LTR MaLR -7 425 17 392 202 32 4 chr2 60823072 60823166 -189864688 - L1MA6 LINE L1 -100 6200 6107 691 252 133 4 chr2 60823245 60823531 -189864323 + MER58 DNA MER1_type 2 2418 -2 2274 125 0 0 chr2 60824330 60824642 -189863212 - AluSq SINE Alu -1 312 1 1926 157 0 0 chr2 60824934 60825228 -189862626 - AluSx SINE Alu -18 294 1 204 307 53 13 chr2 60825339 60825414 -189862440 + L2 LINE L2 3190 3267 -5 1424 209 19 7 chr2 60825827 60826134 -189861720 - AluSx SINE Alu -1 311 1 9098 168 19 11 chr2 60826555 60829108 -189858746 - L1PA13 LINE L1 -2 6161 3606 217 247 41 27 chr2 60829718 60829791 -189858063 - L2 LINE L2 -4 3268 3195 1294 159 22 122 chr2 60830222 60830542 -189857312 + AluJb SINE Alu 7 294 -18 360 0 0 0 chr2 60830940 60830980 -189856874 + (TG)n Simple_repeat Simple_repeat 2 41 0 2051 117 3 0 chr2 60831360 60831681 -189856173 - AluSx SINE Alu 0 322 1 326 269 45 67 chr2 60831726 60831860 -189855994 - L2 LINE L2 -1999 1315 1185 25 0 0 0 chr2 60833653 60833678 -189854176 + AT_rich Low_complexity Low_complexity 1 25 0 280 296 61 0 chr2 60833842 60833957 -189853897 + HAL1b LINE L1 483 604 -744 595 232 57 66 chr2 60834214 60834425 -189853429 - MER63A DNA MER1_type -1 209 1 24 32 0 0 chr2 60834444 60834475 -189853379 + AT_rich Low_complexity Low_complexity 1 31 0 200 235 15 0 chr2 60834495 60834563 -189853291 + GA-rich Low_complexity Low_complexity 2 70 0 440 301 110 77 chr2 60834909 60836009 -189851845 + L1 LINE L1 2286 3421 -2725 225 286 0 0 chr2 60836035 60836098 -189851756 + L1MC3 LINE L1 6067 6129 -1656 2890 259 84 21 chr2 60836275 60836991 -189850863 + L1MC3 LINE L1 6173 6979 -806 1569 137 15 42 chr2 60836991 60837254 -189850600 + AluSx SINE Alu 38 293 -19 2890 259 84 21 chr2 60837254 60837595 -189850259 + L1MC3 LINE L1 6979 7297 -488 3364 231 13 13 chr2 60837610 60838459 -189849395 + L1 LINE L1 4419 5267 -879 1319 139 0 0 chr2 60838449 60838657 -189849197 + L1P LINE L1 4382 4589 -1557 * 632 181 0 9 chr2 60838655 60838771 -189849083 - L1P LINE L1 -1451 4695 4581 * 2688 170 34 25 chr2 60838925 60839489 -189848365 - L1M3 LINE L1 -346 5822 5254 806 80 0 56 chr2 60839494 60839619 -189848235 - L1PA8 LINE L1 0 6172 6055 800 111 0 17 chr2 60839622 60839739 -189848115 - AluSc SINE Alu -8 301 187 908 98 0 0 chr2 60839739 60839871 -189847983 - L1PA8 LINE L1 -106 6066 5935 4461 101 2 0 chr2 60839872 60840879 -189846975 - L1PA8 LINE L1 -475 5697 4690 356 59 20 0 chr2 60841880 60841931 -189845923 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 516 200 9 0 chr2 60841941 60842046 -189845808 - L1PA16 LINE L1 -18 6148 6043 1591 182 3 34 chr2 60842598 60842889 -189844965 - AluJo SINE Alu -25 287 6 219 303 28 37 chr2 60844367 60844476 -189843378 + MIR SINE MIR 34 141 -67 815 175 0 47 chr2 60844518 60844689 -189843165 + MLT1C LTR MaLR 3 165 -302 25 0 0 0 chr2 60844888 60844913 -189842941 + AT_rich Low_complexity Low_complexity 1 25 0 1607 234 93 25 chr2 60844955 60845426 -189842428 + MLT1D LTR MaLR 3 505 0 5708 129 33 7 chr2 60846012 60848078 -189839776 - L1PA15 LINE L1 -5 6160 4059 21 0 0 0 chr2 60848088 60848109 -189839745 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 60848239 60848263 -189839591 + AT_rich Low_complexity Low_complexity 1 24 0 1827 262 94 27 chr2 60848371 60850219 -189837635 + L1ME1 LINE L1 1417 3353 -2862 6746 139 12 12 chr2 60850223 60852329 -189835525 + L1MA1 LINE L1 4195 6302 0 994 283 95 20 chr2 60852577 60853168 -189834686 + L1ME1 LINE L1 3445 4079 -2136 268 239 125 43 chr2 60853323 60853507 -189834347 + L1ME1 LINE L1 5192 5390 -825 330 291 60 15 chr2 60853520 60853654 -189834200 + L1ME1 LINE L1 6008 6147 -19 1379 277 88 17 chr2 60853655 60854248 -189833606 + L1ME1 LINE L1 5382 6016 -219 256 111 67 0 chr2 60854257 60854302 -189833552 + L1MB1 LINE L1 6118 6165 -3 24 77 0 0 chr2 60854302 60854354 -189833500 + AT_rich Low_complexity Low_complexity 1 52 0 652 189 21 14 chr2 60854366 60854509 -189833345 + L1MA10 LINE L1 6180 6323 -11 493 239 17 122 chr2 60854529 60854759 -189833095 + L1ME1 LINE L1 6024 6229 -6 327 275 114 34 chr2 60855800 60855840 -189832014 + L1ME LINE L1 5248 5283 -879 2092 155 75 54 chr2 60855840 60856343 -189831511 + MER67D LTR ERV1 1 514 0 327 275 114 34 chr2 60856343 60856487 -189831367 + L1ME LINE L1 5283 5450 -712 399 288 89 39 chr2 60856555 60856812 -189831042 + L1ME LINE L1 5549 5818 -344 1357 174 87 40 chr2 60856907 60857040 -189830814 - AluJo SINE Alu -22 290 165 2688 0 0 0 chr2 60857040 60857330 -189830524 - AluYa5 SINE Alu -1 310 21 1357 174 87 40 chr2 60857330 60857472 -189830382 - AluJo SINE Alu -147 165 2 1571 199 0 4 chr2 60857667 60857936 -189829918 - MER89 LTR ERV1 -54 505 238 1010 52 22 15 chr2 60857936 60858072 -189829782 + MER85 DNA T2_type 1 137 -2 319 224 96 4 chr2 60858072 60858225 -189829629 - MER89 LTR ERV1 -323 236 6 31 26 0 0 chr2 60858313 60858351 -189829503 + AT_rich Low_complexity Low_complexity 1 38 0 261 285 147 80 chr2 60861166 60861555 -189826299 - MLT1J LTR MaLR 0 511 97 184 339 94 31 chr2 60861808 60861935 -189825919 - L2 LINE L2 -212 3060 2926 200 268 73 0 chr2 60862544 60862626 -189825228 - MIR SINE MIR -51 211 124 2768 146 19 25 chr2 60863285 60863848 -189824006 + L1MA1 LINE L1 5743 6302 0 671 315 42 13 chr2 60864096 60864477 -189823377 + L1M4 LINE L1 3376 3767 -2379 27 0 0 0 chr2 60864603 60864630 -189823224 + GC_rich Low_complexity Low_complexity 1 27 0 234 0 0 0 chr2 60864949 60864975 -189822879 + (TA)n Simple_repeat Simple_repeat 1 26 0 23 0 0 0 chr2 60864990 60865013 -189822841 + AT_rich Low_complexity Low_complexity 1 23 0 195 42 0 0 chr2 60866024 60866048 -189821806 + (GGAAA)n Simple_repeat Simple_repeat 4 27 0 1215 94 0 0 chr2 60866051 60866231 -189821623 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 196 128 21 21 chr2 60866276 60866323 -189821531 + GA-rich Low_complexity Low_complexity 3 49 0 23 33 0 0 chr2 60866589 60866619 -189821235 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 60866922 60866952 -189820902 + AT_rich Low_complexity Low_complexity 1 30 0 2240 67 13 19 chr2 60867082 60867395 -189820459 + AluY SINE Alu 1 311 0 670 237 15 0 chr2 60867429 60867564 -189820290 + FLAM_C SINE Alu 2 138 -5 264 253 0 27 chr2 60867581 60867656 -189820198 + MLT1L LTR MaLR 214 286 -329 21 36 0 0 chr2 60868285 60868313 -189819541 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 60868815 60868838 -189819016 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 2011 138 3 0 chr2 60868969 60869272 -189818582 - AluSx SINE Alu 0 304 1 1145 111 43 43 chr2 60869431 60869639 -189818215 + MER49 LTR ERV1 178 385 -538 2486 17 0 0 chr2 60869639 60869940 -189817914 - L1P LINE L1 -842 5304 5004 5037 16 2 0 chr2 60869940 60870518 -189817336 + L1PA2 LINE L1 5574 6152 -3 3092 144 24 22 chr2 60870540 60871076 -189816778 + MER49 LTR ERV1 378 914 -9 357 355 106 34 chr2 60871329 60871650 -189816204 + L2 LINE L2 2604 2947 -367 663 344 48 6 chr2 60871678 60872009 -189815845 + L1MC/D LINE L1 5445 5789 -2019 280 245 26 103 chr2 60872339 60872494 -189815360 - L1ME LINE L1 -482 5639 5497 206 146 0 24 chr2 60872546 60872587 -189815267 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 24 53 0 0 chr2 60873017 60873055 -189814799 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 60873138 60873159 -189814695 + AT_rich Low_complexity Low_complexity 1 21 0 2937 226 36 11 chr2 60873710 60874375 -189813479 + LTR1B LTR ERV1 1 682 -144 14772 175 64 13 chr2 60874382 60877578 -189810276 + L1 LINE L1 729 4085 -3480 5981 109 13 8 chr2 60877581 60878483 -189809371 + L1MA1 LINE L1 5392 6298 -4 36 0 0 0 chr2 60878483 60878519 -189809335 + AT_rich Low_complexity Low_complexity 1 36 0 1082 170 0 0 chr2 60878519 60878725 -189809129 + L1 LINE L1 6111 6316 -1249 613 246 167 74 chr2 60880696 60881077 -189806777 - L1ME2 LINE L1 -66 6596 6163 2264 99 0 0 chr2 60881077 60881369 -189806485 - AluY SINE Alu -3 308 17 613 246 167 74 chr2 60881369 60881447 -189806407 - L1ME2 LINE L1 -499 6163 6094 775 206 81 14 chr2 60881447 60881656 -189806198 - MLT1C LTR MaLR -186 281 59 626 249 29 25 chr2 60881712 60881953 -189805901 - L1ME2 LINE L1 -1804 4840 4599 1377 92 5 22 chr2 60881953 60882138 -189805716 + AluSp SINE Alu 99 280 -33 414 0 0 0 chr2 60882138 60882184 -189805670 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 1166 293 156 11 chr2 60882230 60883246 -189804608 - L1ME2 LINE L1 -2119 4525 3363 * 4611 175 22 12 chr2 60883240 60884223 -189803631 - L1 LINE L1 -1315 6250 5258 * 6854 210 78 10 chr2 60884219 60885430 -189802424 - L1 LINE L1 -4587 2978 1851 7351 171 151 26 chr2 60885430 60886989 -189800865 - MER52A LTR ERV1 -1 1754 1 6854 210 78 10 chr2 60886989 60887832 -189800022 - L1 LINE L1 -5714 1851 12 283 260 118 6 chr2 60887906 60888075 -189799779 - L1ME2 LINE L1 -4783 1861 1674 2303 88 23 0 chr2 60888088 60888394 -189799460 - AluSp SINE Alu 0 313 1 469 275 134 44 chr2 60888398 60888718 -189799136 - L1ME2 LINE L1 -4956 1586 1238 26 74 0 0 chr2 60888978 60889032 -189798822 + AT_rich Low_complexity Low_complexity 1 54 0 274 313 78 18 chr2 60890411 60890695 -189797159 - L1ME3A LINE L1 -221 5949 5649 909 233 28 9 chr2 60891704 60891919 -189795935 + MER58A DNA MER1_type 5 223 -1 1714 261 53 6 chr2 60892944 60893457 -189794397 - MER90 LTR ERV1 0 614 78 313 193 149 9 chr2 60894326 60894440 -189793414 + MER53 DNA DNA 1 130 -59 203 179 0 0 chr2 60894484 60894523 -189793331 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 263 217 17 0 chr2 60895320 60895380 -189792474 + MER58 DNA MER1_type 2308 2368 -52 22 0 0 0 chr2 60896145 60896167 -189791687 + AT_rich Low_complexity Low_complexity 1 22 0 17049 187 44 21 chr2 60896302 60899443 -189788411 + L1MA2 LINE L1 15 3082 -4483 2108 112 4 4 chr2 60899443 60899760 -189788094 + AluSc SINE Alu 1 317 0 17049 187 44 21 chr2 60899760 60902794 -189785060 + L1MA2 LINE L1 3082 6343 -1222 6161 110 46 1 chr2 60902791 60903770 -189784084 + L1MA2 LINE L1 6700 7722 -1 * 283 372 66 0 chr2 60903835 60903972 -189783882 - MIR SINE MIR -71 191 46 1449 221 37 49 chr2 60903984 60904449 -189783405 + MER89 LTR ERV1 1 559 0 247 237 0 0 chr2 60905160 60905219 -189782635 + MER103 DNA DNA 31 89 -77 405 299 194 30 chr2 60905489 60905690 -189782164 + MIR SINE MIR 1 234 -28 42395 36 23 0 chr2 60907461 60913470 -189774384 + L1PA2 LINE L1 1 6148 -7 22 35 0 0 chr2 60913470 60913499 -189774355 + AT_rich Low_complexity Low_complexity 1 29 0 443 237 114 9 chr2 60915685 60915799 -189772055 - L2 LINE L2 -1 3312 3187 915 263 55 18 chr2 60915803 60916077 -189771777 + L2 LINE L2 2282 2565 -749 287 323 66 69 chr2 60916313 60916632 -189771222 + L1MD3 LINE L1 6637 6954 -1007 848 231 14 14 chr2 60916658 60916866 -189770988 + AluJo SINE Alu 1 208 -104 1399 234 45 96 chr2 60916867 60917329 -189770525 + L1MC5 LINE L1 7093 7577 -384 1556 25 0 35 chr2 60917329 60917527 -189770327 + L1PA5 LINE L1 5951 6141 -13 180 0 0 0 chr2 60917531 60917551 -189770303 + (TA)n Simple_repeat Simple_repeat 2 21 0 1399 234 45 96 chr2 60917551 60917950 -189769904 + L1MC5 LINE L1 7580 7915 -46 1374 205 68 27 chr2 60918554 60918891 -189768963 - MLT1B LTR MaLR -6 384 34 33 43 0 0 chr2 60918965 60919012 -189768842 + AT_rich Low_complexity Low_complexity 1 47 0 2359 120 43 3 chr2 60919013 60919389 -189768465 - L1PA15 LINE L1 -17 6148 5758 300 331 41 41 chr2 60919556 60919701 -189768153 + MIR SINE MIR 20 164 -98 43 35 0 0 chr2 60919712 60919769 -189768085 + AT_rich Low_complexity Low_complexity 1 57 0 2602 17 3 0 chr2 60919932 60920226 -189767628 - AluYb8 SINE Alu -3 315 21 182 282 35 35 chr2 60920636 60920721 -189767133 - MIR SINE MIR -155 107 23 205 328 16 0 chr2 60921023 60921084 -189766770 - MIR SINE MIR -114 148 87 231 326 159 15 chr2 60921868 60922000 -189765854 + MIR SINE MIR 40 190 -72 207 343 48 19 chr2 60922319 60922424 -189765430 - MIR SINE MIR -68 140 33 21 0 0 0 chr2 60923094 60923115 -189764739 + AT_rich Low_complexity Low_complexity 1 21 0 742 209 3 5 chr2 60923592 60923784 -189764070 - L1MD3 LINE L1 -18 7977 7708 573 302 10 24 chr2 60924650 60924855 -189762999 - L1M3e LINE L1 -6828 202 1 255 360 50 36 chr2 60925921 60925989 -189761865 + MIR SINE MIR 3 69 -193 1461 244 48 44 chr2 60925989 60926492 -189761362 + MLT1D LTR MaLR 1 505 0 255 360 50 36 chr2 60926492 60926562 -189761292 + MIR SINE MIR 69 143 -119 672 224 127 67 chr2 60926571 60926987 -189760867 - HsTC2 DNA Tc2 0 1900 1284 423 163 0 0 chr2 60927339 60927419 -189760435 + (CATATA)n Simple_repeat Simple_repeat 5 84 0 289 209 110 0 chr2 60930005 60930096 -189757758 + L1ME4a LINE L1 5783 5883 -238 1883 114 73 0 chr2 60931308 60931580 -189756274 - AluSq SINE Alu -19 294 3 276 190 69 0 chr2 60932047 60932105 -189755749 + HERVL LTR ERVL 2401 2462 -3192 251 247 247 0 chr2 60932114 60932187 -189755667 + MER58 DNA MER1_type 1 91 -2329 254 231 77 0 chr2 60932212 60932277 -189755577 + MER58 DNA MER1_type 2348 2417 -3 556 300 21 11 chr2 60932491 60932681 -189755173 + HERVL LTR ERVL 2892 3083 -2681 2039 302 108 52 chr2 60932913 60934190 -189753664 + HERVL LTR ERVL 3352 4699 -1065 2774 10 3 0 chr2 60934288 60934598 -189753256 - AluY SINE Alu 0 311 1 253 376 21 10 chr2 60935000 60935194 -189752660 + HERVL LTR ERVL 5194 5389 -375 894 308 101 35 chr2 60935411 60935895 -189751959 + LTR33 LTR ERVL 3 518 -3 27 29 0 0 chr2 60936337 60936371 -189751483 + AT_rich Low_complexity Low_complexity 1 34 0 236 227 0 30 chr2 60937579 60937645 -189750209 - MLT1H LTR MaLR -32 517 454 742 221 163 95 chr2 60938920 60939300 -189748554 - MLT1G3 LTR MaLR -4 538 106 1775 163 17 3 chr2 60939531 60939819 -189748035 - AluJb SINE Alu -20 292 1 25 31 0 0 chr2 60939822 60939854 -189748000 + AT_rich Low_complexity Low_complexity 1 32 0 405 327 46 33 chr2 60940211 60940364 -189747490 + MER91A DNA MER1_type 42 196 0 416 287 127 6 chr2 60940464 60940621 -189747233 + MIR SINE MIR 51 226 -36 260 354 168 30 chr2 60941404 60941851 -189746003 + L2 LINE L2 2765 3272 0 24 0 0 0 chr2 60942684 60942708 -189745146 + AT_rich Low_complexity Low_complexity 1 24 0 637 199 20 13 chr2 60942950 60943101 -189744753 - MER53 DNA DNA -35 154 3 22 0 0 0 chr2 60943432 60943454 -189744400 + AT_rich Low_complexity Low_complexity 1 22 0 382 109 39 30 chr2 60944168 60944405 -189743449 + (TTATA)n Simple_repeat Simple_repeat 1 239 0 182 155 26 35 chr2 60944425 60944541 -189743313 + (TTATA)n Simple_repeat Simple_repeat 5 119 0 516 329 68 50 chr2 60945769 60946149 -189741705 - L2 LINE L2 0 3313 2927 1819 253 56 31 chr2 60946158 60946806 -189741048 + L1ME2 LINE L1 5491 6154 -10 1198 117 0 0 chr2 60946926 60947088 -189740766 - AluSq SINE Alu -151 162 1 1234 219 58 40 chr2 60947140 60947653 -189740201 - L1ME LINE L1 -710 5454 4940 2543 113 43 17 chr2 60947653 60948070 -189739784 - MSTA LTR MaLR 0 428 1 1234 219 58 40 chr2 60948070 60948123 -189739731 - L1ME LINE L1 -1224 4940 4889 907 326 40 69 chr2 60948168 60948791 -189739063 + L2 LINE L2 2149 2753 -561 236 367 20 20 chr2 60948814 60948912 -189738942 - L2 LINE L2 -22 3291 3194 400 308 98 63 chr2 60949421 60949769 -189738085 + L2 LINE L2 2921 3280 -33 647 274 34 0 chr2 60949911 60950090 -189737764 + MIR SINE MIR 4 188 -74 860 280 29 47 chr2 60950435 60950832 -189737022 - MLT1H LTR MaLR -18 531 26 3199 165 33 10 chr2 60951884 60952218 -189735636 - L1MA7 LINE L1 -25 6266 5933 1903 206 12 98 chr2 60952218 60952908 -189734946 - L1PA3 LINE L1 -226 5929 5336 1792 108 74 64 chr2 60952908 60953205 -189734649 - AluSg SINE Alu -10 300 1 1903 206 12 98 chr2 60953205 60953255 -189734599 - L1PA3 LINE L1 -819 5336 5283 234 81 0 0 chr2 60953256 60953293 -189734561 + (T)n Simple_repeat Simple_repeat 1 37 0 2227 85 0 3 chr2 60953343 60953637 -189734217 + AluY SINE Alu 1 293 -18 720 203 76 5 chr2 60953643 60953840 -189734014 - L1MA7 LINE L1 -864 5282 5072 181 320 72 31 chr2 60953953 60954050 -189733804 - MIR3 SINE MIR -8 200 100 * 442 330 15 45 chr2 60954046 60954246 -189733608 + MIR SINE MIR 7 200 -62 204 185 0 0 chr2 60954573 60954627 -189733227 + CT-rich Low_complexity Low_complexity 1 54 0 363 284 0 0 chr2 60955053 60955141 -189732713 - MIR SINE MIR -3 259 172 4887 183 25 14 chr2 60955199 60956323 -189731531 - L1PA16 LINE L1 -3 6163 5015 1020 43 14 14 chr2 60956323 60956464 -189731390 - L1PA13 LINE L1 -1 6162 6022 4887 183 25 14 chr2 60956464 60956972 -189730882 - L1PA16 LINE L1 -1151 5015 4514 402 220 10 0 chr2 60956969 60957069 -189730785 + L1PA16 LINE L1 4407 4507 -1639 * 190 75 25 25 chr2 60957694 60957706 -189730148 + (CA)n Simple_repeat Simple_repeat 2 13 -28 1621 229 28 3 chr2 60957706 60958059 -189729795 - MLT1A1 LTR MaLR 0 365 4 190 75 25 25 chr2 60958059 60958086 -189729768 + (CA)n Simple_repeat Simple_repeat 12 41 0 2281 104 3 0 chr2 60958803 60959110 -189728744 - AluSx SINE Alu -3 309 2 320 294 114 27 chr2 60959416 60959600 -189728254 + L2 LINE L2 3108 3307 -6 1505 162 10 51 chr2 60960385 60960699 -189727155 + MLT1B LTR MaLR 84 384 -6 762 244 189 32 chr2 60960767 60961079 -189726775 + MLT1D LTR MaLR 103 463 -42 21 0 0 0 chr2 60961079 60961100 -189726754 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr2 60961130 60961178 -189726676 + AT_rich Low_complexity Low_complexity 1 48 0 477 84 0 0 chr2 60961285 60961356 -189726498 + (CA)n Simple_repeat Simple_repeat 2 72 0 211 195 0 0 chr2 60961566 60961607 -189726247 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 198 133 67 0 chr2 60961701 60961791 -189726063 + (TA)n Simple_repeat Simple_repeat 1 96 0 205 286 104 0 chr2 60962918 60962995 -189724859 - L2 LINE L2 -12 3260 3176 238 331 63 24 chr2 60964097 60964224 -189723630 - L2 LINE L2 0 3313 3182 247 240 13 13 chr2 60964862 60964937 -189722917 - MER94 DNA DNA -54 80 6 360 312 9 0 chr2 60965655 60965764 -189722090 - MLT1F-int LTR MaLR -780 591 482 185 0 40 0 chr2 60965780 60965805 -189722049 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 740 96 0 43 chr2 60965806 60965921 -189721933 - L1PA8 LINE L1 -18 6154 6045 295 45 0 23 chr2 60965923 60965967 -189721887 + L1P3 LINE L1 5400 5442 -730 2300 104 0 0 chr2 60965995 60966302 -189721552 - AluSg SINE Alu -3 307 1 2088 118 6 19 chr2 60966442 60966755 -189721099 + AluSx SINE Alu 1 309 -3 295 268 123 7 chr2 60966808 60966946 -189720908 - MLT1F-int LTR MaLR -1216 155 2 1851 255 58 14 chr2 60966949 60967462 -189720392 - MLT1F LTR MaLR -2 540 5 205 59 29 88 chr2 60967576 60967644 -189720210 + (CCCA)n Simple_repeat Simple_repeat 3 66 0 204 97 0 0 chr2 60968836 60968867 -189718987 + (TG)n Simple_repeat Simple_repeat 2 32 0 202 396 59 12 chr2 60969097 60969266 -189718588 - MER5B DNA MER1_type 0 178 2 2687 86 36 0 chr2 60969396 60969780 -189718074 - L1PA10 LINE L1 -4 6164 5767 180 111 0 0 chr2 60971111 60971138 -189716716 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 337 239 51 17 chr2 60971460 60971577 -189716277 - L2 LINE L2 -1587 1727 1607 1638 198 56 99 chr2 60971588 60971957 -189715897 - L1 LINE L1 -1014 5132 4814 423 189 0 0 chr2 60971957 60972031 -189715823 - Tigger5 DNA MER2_type 0 2323 2250 1638 198 56 99 chr2 60972031 60972457 -189715397 - L1 LINE L1 -1332 4814 4371 1322 260 64 28 chr2 60972566 60972955 -189714899 - L2 LINE L2 -1750 1564 1162 1639 287 87 22 chr2 60972956 60973783 -189714071 + HAL1 LINE L1 1544 2424 -83 198 103 0 0 chr2 60974320 60974349 -189713505 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 54 0 0 chr2 60974569 60974606 -189713248 + AT_rich Low_complexity Low_complexity 1 37 0 241 309 93 10 chr2 60975524 60975621 -189712233 + MIR SINE MIR 2 106 -156 1136 206 72 58 chr2 60976377 60976737 -189711117 + MLT1A1 LTR MaLR 1 365 0 212 100 0 60 chr2 60977503 60977553 -189710301 + (A)n Simple_repeat Simple_repeat 1 47 0 357 316 130 26 chr2 60978524 60978891 -189708963 + L1ME3A LINE L1 5384 5825 -345 1716 160 91 0 chr2 60978891 60979209 -189708645 + MER7A DNA MER2_type 2 346 0 357 316 130 26 chr2 60979209 60979351 -189708503 + L1ME3A LINE L1 5825 5951 -219 26 0 0 0 chr2 60979375 60979401 -189708453 + AT_rich Low_complexity Low_complexity 1 26 0 405 276 69 44 chr2 60980036 60980239 -189707615 + L1MC4 LINE L1 6799 7006 -1036 2185 104 70 50 chr2 60981846 60981997 -189705857 + THE1B LTR MaLR 1 148 -216 2102 133 7 0 chr2 60981997 60982297 -189705557 - AluSx SINE Alu -10 302 1 2185 104 70 50 chr2 60982297 60982502 -189705352 + THE1B LTR MaLR 148 364 0 1693 166 105 111 chr2 60982639 60983145 -189704709 + MLT1D LTR MaLR 1 503 -2 2336 64 3 3 chr2 60984488 60984786 -189703068 - AluY SINE Alu -13 298 1 210 369 54 24 chr2 60984896 60985064 -189702790 + MIR SINE MIR 20 192 -70 181 400 12 0 chr2 60985902 60985982 -189701872 - L3 LINE CR1 -459 1118 1038 314 191 21 64 chr2 60986689 60986783 -189701071 - L3 LINE CR1 -645 932 843 358 365 65 9 chr2 60986859 60987089 -189700765 + MIR SINE MIR 16 258 -4 460 268 6 67 chr2 60987519 60987698 -189700156 + MIR SINE MIR 95 262 0 350 320 20 14 chr2 60988238 60988385 -189699469 + MER5A DNA MER1_type 37 184 -5 627 291 24 10 chr2 60988469 60988675 -189699179 + MIR SINE MIR 53 261 -1 483 332 68 19 chr2 60989651 60989856 -189697998 + MIR SINE MIR 48 262 0 320 330 78 0 chr2 60990079 60990182 -189697672 - L2 LINE L2 -25 3247 3137 208 444 17 0 chr2 60990741 60990856 -189696998 - L2 LINE L2 -214 3058 2942 245 253 13 27 chr2 60991137 60991212 -189696642 - MLT1I LTR MaLR -62 347 274 292 394 36 14 chr2 60991261 60991482 -189696372 - L2 LINE L2 -579 2735 2510 2367 132 22 0 chr2 60991668 60992024 -189695830 - THE1B LTR MaLR 0 364 1 301 262 75 9 chr2 60992362 60992469 -189695385 + MIR SINE MIR 84 197 -65 4374 232 37 19 chr2 60992533 60993627 -189694227 - L1MD1 LINE L1 0 6636 5509 2097 118 3 0 chr2 60993627 60993914 -189693940 - AluSx SINE Alu -24 288 1 4374 232 37 19 chr2 60993914 60994252 -189693602 - L1MD1 LINE L1 -1127 5509 5179 1322 253 63 21 chr2 60994270 60994744 -189693110 - L1MD1 LINE L1 -1570 4970 4477 1148 190 160 66 chr2 60994918 60995250 -189692604 - MLT1A2 LTR MaLR -11 363 1 343 198 58 23 chr2 60995348 60995434 -189692420 - L1MD1 LINE L1 -6434 106 18 758 249 16 5 chr2 60996295 60996480 -189691374 + MER5A DNA MER1_type 3 189 0 403 269 70 29 chr2 60997032 60997203 -189690651 - MIR SINE MIR -59 203 26 1565 225 51 31 chr2 60998077 60998531 -189689323 + MLT1C LTR MaLR 5 467 0 2706 90 19 0 chr2 60998702 60999070 -189688784 + THE1C LTR MaLR 1 375 0 405 0 0 0 chr2 60999203 60999248 -189688606 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 25 31 0 0 chr2 60999490 60999522 -189688332 + AT_rich Low_complexity Low_complexity 1 32 0 244 250 25 12 chr2 60999522 60999602 -189688252 - L1MC4 LINE L1 -1322 6720 6640 226 222 99 74 chr2 60999853 61000015 -189687839 - L1MC/D LINE L1 -929 5430 5265 22 56 0 0 chr2 61000103 61000139 -189687715 + AT_rich Low_complexity Low_complexity 1 36 0 241 233 67 42 chr2 61000230 61000350 -189687504 - L1P LINE L1 -1097 5049 4927 434 281 78 12 chr2 61000456 61000623 -189687231 - L2 LINE L2 -1433 1881 1704 526 171 80 57 chr2 61001177 61001353 -189686501 - MER53 DNA DNA 0 189 10 405 314 74 93 chr2 61001462 61001991 -189685863 + HAL1 LINE L1 754 1272 -1235 2091 123 0 7 chr2 61002250 61002542 -189685312 + AluSg SINE Alu 1 290 -20 337 254 49 56 chr2 61003396 61003538 -189684316 + L2 LINE L2 3173 3313 0 327 25 0 0 chr2 61004729 61004769 -189683085 + (GA)n Simple_repeat Simple_repeat 1 40 0 1413 155 28 8 chr2 61005406 61005658 -189682196 + Tigger7 DNA MER2_type 2331 2587 0 259 357 35 45 chr2 61006330 61006530 -189681324 + MIR SINE MIR 20 216 -46 1427 199 10 23 chr2 61006842 61007144 -189680710 + AluJo SINE Alu 1 298 -14 468 51 0 0 chr2 61007158 61007217 -189680637 + (GGAA)n Simple_repeat Simple_repeat 2 60 0 22 0 0 0 chr2 61007549 61007571 -189680283 + AT_rich Low_complexity Low_complexity 1 22 0 7217 172 48 29 chr2 61007670 61010282 -189677572 - L1MA3 LINE L1 0 6305 3649 1783 195 100 5 chr2 61010282 61010671 -189677183 + MSTB LTR MaLR 1 426 0 8427 199 26 14 chr2 61010671 61012240 -189675614 + MSTB-int LTR MaLR 1 1593 -58 1693 162 67 18 chr2 61012240 61012567 -189675287 + MER61A LTR ERV1 1 343 0 8427 199 26 14 chr2 61012567 61012627 -189675227 + MSTB-int LTR MaLR 1593 1651 0 485 197 99 0 chr2 61012666 61012818 -189675036 - L1MD3 LINE L1 -972 7023 6857 4987 176 17 14 chr2 61012821 61014298 -189673556 - L1PB4 LINE L1 0 7575 6100 9161 194 41 14 chr2 61014310 61015368 -189672486 - L1PB4 LINE L1 -4237 3328 2300 479 74 0 62 chr2 61015368 61015449 -189672405 - L1PA13 LINE L1 0 6163 6088 9161 194 41 14 chr2 61015449 61016973 -189670881 - L1PB4 LINE L1 -5265 2300 11 1950 123 30 88 chr2 61017260 61017658 -189670196 - THE1C LTR MaLR 0 375 1 355 167 30 0 chr2 61017702 61017768 -189670086 - THE1C LTR MaLR -3 372 305 8564 142 13 22 chr2 61017772 61019397 -189668457 + L1PA11 LINE L1 3904 5477 -697 1902 149 0 0 chr2 61019397 61019722 -189668132 + AluSx SINE Alu 1 325 0 8564 142 13 22 chr2 61019722 61020411 -189667443 + L1PA11 LINE L1 5477 6170 -4 1280 206 96 7 chr2 61020423 61020705 -189667149 + LTR42 LTR ERVL 181 487 -8 394 267 199 11 chr2 61021029 61021220 -189666634 + L1MC5 LINE L1 6993 7219 -742 274 308 113 6 chr2 61021312 61021471 -189666383 + L1MC5 LINE L1 7261 7436 -525 690 243 28 39 chr2 61021478 61021711 -189666143 + L1MC/D LINE L1 5262 5500 -687 1788 162 10 10 chr2 61021919 61022228 -189665626 + LTR8A LTR ERV1 240 548 -179 918 224 5 15 chr2 61022265 61022461 -189665393 + LTR8 LTR ERV1 498 691 0 409 193 0 0 chr2 61022468 61022551 -189665303 - L1MC2 LINE L1 -97 6247 6165 320 100 0 114 chr2 61022551 61022597 -189665257 - LTR23 LTR ERV1 0 437 387 1995 101 0 28 chr2 61022597 61022885 -189664969 + AluSx SINE Alu 1 280 -32 248 77 26 0 chr2 61022885 61022924 -189664930 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 320 100 0 114 chr2 61022924 61022946 -189664908 - LTR23 LTR ERV1 -48 389 376 * 1956 119 52 3 chr2 61022931 61023258 -189664596 - LTR56 LTR ERV1 -75 370 28 1757 177 35 3 chr2 61023294 61023661 -189664193 - L1MC2 LINE L1 -176 6168 5790 235 128 51 0 chr2 61023695 61023734 -189664120 - MER2 DNA MER2_type -24 321 281 272 114 23 0 chr2 61023752 61023796 -189664058 - MER2 DNA MER2_type -299 46 2 5036 253 31 16 chr2 61023808 61025436 -189662418 - L1M4 LINE L1 -1747 4399 2748 2036 283 53 45 chr2 61028084 61029980 -189657874 - L1MC2 LINE L1 -558 5606 3728 964 182 87 30 chr2 61029989 61030220 -189657634 - THE1C LTR MaLR 0 375 132 306 125 0 0 chr2 61030379 61030427 -189657427 + (T)n Simple_repeat Simple_repeat 1 48 0 519 194 155 0 chr2 61030463 61030592 -189657262 - MER103 DNA DNA 0 166 18 220 371 66 36 chr2 61032881 61033048 -189654806 + L2 LINE L2 3140 3311 -2 510 306 64 34 chr2 61034660 61034957 -189652897 + HAL1 LINE L1 12 317 -2190 340 324 29 0 chr2 61034975 61035080 -189652774 + L2 LINE L2 3206 3313 0 289 333 10 0 chr2 61035114 61035210 -189652644 + HAL1 LINE L1 423 519 -1988 510 271 86 90 chr2 61035289 61035836 -189652018 + HAL1 LINE L1 659 1203 -1304 213 121 0 0 chr2 61035841 61035874 -189651980 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 504 282 149 62 chr2 61035894 61035939 -189651915 + HAL1 LINE L1 1106 1146 -1361 1476 191 36 26 chr2 61035939 61036248 -189651606 + AluJo SINE Alu 1 312 0 504 282 149 62 chr2 61036248 61036804 -189651050 + HAL1 LINE L1 1146 1760 -747 436 209 0 22 chr2 61036908 61037042 -189650812 + G-rich Low_complexity Low_complexity 3 133 0 215 211 0 0 chr2 61037049 61037087 -189650767 + polypurine Low_complexity Low_complexity 4 41 0 876 161 8 8 chr2 61037087 61037314 -189650540 + GA-rich Low_complexity Low_complexity 1 227 0 945 279 29 67 chr2 61037333 61037929 -189649925 + HAL1 LINE L1 1935 2507 0 216 360 41 41 chr2 61039254 61039410 -189648444 - MIR SINE MIR -22 240 85 405 303 62 24 chr2 61039410 61039621 -189648233 + MIR SINE MIR 3 221 -41 1882 199 69 116 chr2 61040022 61040749 -189647105 + LTR8A LTR ERV1 35 727 0 2586 121 8 3 chr2 61040771 61041144 -189646710 - THE1C LTR MaLR 0 375 1 186 113 88 25 chr2 61041235 61041395 -189646459 + (TA)n Simple_repeat Simple_repeat 2 171 0 610 280 84 40 chr2 61042715 61042965 -189644889 + MIR SINE MIR 1 261 -1 21 36 0 0 chr2 61043309 61043337 -189644517 + AT_rich Low_complexity Low_complexity 1 28 0 599 224 132 5 chr2 61043410 61043615 -189644239 + L1ME LINE L1 4350 4580 -1566 908 129 0 0 chr2 61044133 61044265 -189643589 - FLAM_C SINE Alu -1 132 1 1541 215 61 0 chr2 61044517 61044861 -189642993 + MLT1A1 LTR MaLR 1 365 0 7596 28 0 0 chr2 61045439 61046538 -189641316 + L1PA3 LINE L1 5047 6150 -5 236 283 0 17 chr2 61046714 61046774 -189641080 - MIR SINE MIR -67 141 83 400 294 73 43 chr2 61047129 61047463 -189640391 + L1ME LINE L1 5454 5797 -324 287 342 135 29 chr2 61047744 61048121 -189639733 + L3 LINE CR1 612 1028 -549 13215 28 0 0 chr2 61048172 61049737 -189638117 + L1PA3 LINE L1 3555 5119 -1027 7705 15 0 0 chr2 61049838 61050885 -189636969 + L1PA3 LINE L1 5137 6183 0 373 243 65 47 chr2 61050889 61050996 -189636858 + L2 LINE L2 3205 3313 0 432 362 141 17 chr2 61051066 61051414 -189636440 + L3 LINE CR1 1136 1526 -51 330 268 52 39 chr2 61052412 61052565 -189635289 + MIR3 SINE MIR 39 193 -15 523 247 111 87 chr2 61052677 61053057 -189634797 - LTR16C LTR ERVL 0 491 103 314 352 91 46 chr2 61053285 61053774 -189634080 - L2 LINE L2 -67 3205 2709 251 362 153 34 chr2 61054215 61055122 -189632732 - L2 LINE L2 -564 2750 1736 198 71 0 0 chr2 61055131 61055159 -189632695 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 511 294 20 49 chr2 61055573 61055777 -189632077 - L2 LINE L2 -1 3312 3115 21 36 0 0 chr2 61056220 61056248 -189631606 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 61056801 61056823 -189631031 + (T)n Simple_repeat Simple_repeat 1 22 0 261 0 0 0 chr2 61057140 61057169 -189630685 + (TA)n Simple_repeat Simple_repeat 1 29 0 1985 134 10 3 chr2 61057170 61057460 -189630394 - AluSx SINE Alu -20 292 1 491 337 30 20 chr2 61057616 61057818 -189630036 + L3 LINE CR1 1372 1575 -2 268 265 0 0 chr2 61058332 61058400 -189629454 - LTR67 LTR ERVL -488 69 2 519 264 71 65 chr2 61059855 61060208 -189627646 - LTR16B LTR ERVL -1 463 109 24 96 0 0 chr2 61061124 61061197 -189626657 + AT_rich Low_complexity Low_complexity 1 73 0 2493 281 104 8 chr2 61061710 61062143 -189625711 + L2 LINE L2 2111 2501 -812 2118 148 31 77 chr2 61062143 61062596 -189625258 + MSTB1 LTR MaLR 1 432 0 2493 281 104 8 chr2 61062596 61063008 -189624846 + L2 LINE L2 2501 3031 -282 1065 315 82 27 chr2 61063008 61063523 -189624331 + MLT1H LTR MaLR 1 543 -6 1859 173 36 0 chr2 61063931 61064266 -189623588 - MER7A DNA MER2_type -1 345 1 464 273 0 0 chr2 61064992 61065091 -189622763 - Tigger7 DNA MER2_type 0 2587 2489 * 1309 266 0 0 chr2 61065089 61065356 -189622498 - Tigger7 DNA MER2_type -466 267 1 1830 191 31 8 chr2 61065461 61065818 -189622036 - MLT1A1 LTR MaLR 0 365 1 561 282 30 19 chr2 61065891 61066070 -189621784 + MLT1H LTR MaLR 3 168 -381 21 57 0 0 chr2 61066755 61066790 -189621064 + AT_rich Low_complexity Low_complexity 1 35 0 27 0 0 0 chr2 61067493 61067520 -189620334 + AT_rich Low_complexity Low_complexity 1 27 0 1787 208 26 10 chr2 61067543 61067927 -189619927 + MLT1B LTR MaLR 1 390 0 261 0 0 0 chr2 61068279 61068308 -189619546 + (TTG)n Simple_repeat Simple_repeat 2 30 0 232 269 42 42 chr2 61068485 61068604 -189619250 + MLT1J LTR MaLR 393 511 0 1341 179 8 0 chr2 61068999 61069233 -189618621 + MER46A DNA MER2_type 1 236 0 23 0 0 0 chr2 61069279 61069302 -189618552 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr2 61069926 61069960 -189617894 + AT_rich Low_complexity Low_complexity 1 34 0 680 264 71 70 chr2 61070018 61070423 -189617431 + L1MC5 LINE L1 6607 6911 -897 1302 134 96 0 chr2 61070443 61070704 -189617150 - L1MA8 LINE L1 -6 6285 6000 303 358 45 14 chr2 61070896 61071251 -189616603 - L1ME LINE L1 -409 5712 5347 21 0 0 0 chr2 61071251 61071272 -189616582 + AT_rich Low_complexity Low_complexity 1 21 0 2166 70 40 33 chr2 61071326 61071628 -189616226 - AluY SINE Alu -7 304 1 587 350 125 28 chr2 61072455 61072878 -189614976 - L2 LINE L2 0 3313 2850 5164 222 50 29 chr2 61072887 61073786 -189614068 - L1MB5 LINE L1 -74 6100 5222 2527 89 73 0 chr2 61073786 61074169 -189613685 - L1MA2 LINE L1 0 6304 5894 975 47 24 0 chr2 61074169 61074295 -189613559 - L1PA12 LINE L1 0 6168 6039 5164 222 50 29 chr2 61074295 61075235 -189612619 - L1MB5 LINE L1 -952 5222 4211 1770 173 7 3 chr2 61075235 61075530 -189612324 + AluJb SINE Alu 1 296 -16 5164 222 50 29 chr2 61075530 61075730 -189612124 - L1MB5 LINE L1 -1963 4211 4017 487 165 0 0 chr2 61075731 61075828 -189612026 - L1MDa LINE L1 -4122 2418 2322 272 138 43 117 chr2 61075816 61075910 -189611944 + L1MC4 LINE L1 6617 6703 -1339 * 364 250 109 0 chr2 61075917 61076009 -189611845 + Tigger3b DNA MER2_type 1 102 -1129 * 2108 104 21 21 chr2 61076007 61076344 -189611510 + Tigger3b DNA MER2_type 274 610 -621 36900 32 23 1 chr2 61076344 61081729 -189606125 + L1PA3 LINE L1 665 6170 0 3005 161 54 10 chr2 61081749 61082327 -189605527 + Tigger3b DNA MER2_type 620 1222 -10 1145 209 78 24 chr2 61082340 61082713 -189605141 - L1MDa LINE L1 -4208 2332 1940 * 3526 237 111 52 chr2 61082690 61083772 -189604082 - L1MDa LINE L1 -5274 1266 121 353 222 0 0 chr2 61083795 61083858 -189603996 - Tigger3b DNA MER2_type -1081 150 88 409 294 78 17 chr2 61083972 61084152 -189603702 - MIR SINE MIR -57 205 15 211 302 35 35 chr2 61084153 61084239 -189603615 + L2 LINE L2 3187 3272 0 360 0 0 0 chr2 61084354 61084394 -189603460 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 36 0 0 chr2 61084572 61084600 -189603254 + AT_rich Low_complexity Low_complexity 1 28 0 335 318 81 24 chr2 61084683 61084894 -189602960 - L1M4 LINE L1 -1450 4696 4474 2437 168 42 8 chr2 61084910 61085387 -189602467 - L1MA6 LINE L1 -9 6291 5799 2094 139 25 18 chr2 61085387 61085868 -189601986 + L1M2 LINE L1 5151 5636 -664 198 0 0 0 chr2 61086827 61086849 -189601005 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 681 45 0 0 chr2 61086860 61086948 -189600906 - L1PA4 LINE L1 0 6155 6068 395 258 10 10 chr2 61086952 61087049 -189600805 - MLT1J LTR MaLR -389 122 26 189 0 0 0 chr2 61089737 61089758 -189598096 + (TAAAAA)n Simple_repeat Simple_repeat 1 21 0 228 35 0 0 chr2 61089885 61089914 -189597940 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 27 62 0 0 chr2 61090960 61091008 -189596846 + AT_rich Low_complexity Low_complexity 1 48 0 492 153 0 63 chr2 61091651 61091762 -189596092 - AluJb SINE Alu 0 312 209 772 234 77 14 chr2 61091829 61092038 -189595816 + MER58A DNA MER1_type 2 223 -1 2689 228 65 28 chr2 61092109 61093114 -189594740 + L1MC4a LINE L1 6732 7808 0 226 311 16 0 chr2 61093854 61093915 -189593939 - L2 LINE L2 -1 3271 3210 1478 192 36 7 chr2 61094476 61094757 -189593097 - AluJo SINE Alu -23 289 1 5855 118 0 3 chr2 61094779 61095641 -189592213 - L1PA8A LINE L1 -1567 4579 3721 * 6259 106 10 0 chr2 61095638 61097175 -189590679 + L1PA8A LINE L1 4572 6118 -13 1404 237 98 9 chr2 61097216 61097654 -189590200 + Charlie4a DNA MER1_type 32 508 0 41950 36 24 1 chr2 61098122 61104140 -189583714 + L1PA3 LINE L1 13 6172 0 4012 199 2 4 chr2 61105829 61106670 -189581184 + L1 LINE L1 2330 3169 -2977 247 328 24 40 chr2 61107304 61107429 -189580425 + MIR SINE MIR 81 203 -59 445 301 33 13 chr2 61107497 61107650 -189580204 + MIR SINE MIR 104 259 -3 30 0 0 0 chr2 61107853 61107883 -189579971 + AT_rich Low_complexity Low_complexity 1 30 0 182 214 0 24 chr2 61110426 61110468 -189577386 - MIR3 SINE MIR -12 196 156 29 70 0 0 chr2 61110753 61110810 -189577044 + AT_rich Low_complexity Low_complexity 1 57 0 2459 68 0 3 chr2 61114243 61114551 -189573303 - AluY SINE Alu -4 307 1 301 314 197 24 chr2 61115045 61115335 -189572519 - L1MC/D LINE L1 -1986 5822 5483 672 239 61 15 chr2 61115634 61115831 -189572023 + MLT1A1 LTR MaLR 118 323 -42 1054 115 44 0 chr2 61116792 61116975 -189570879 - L1MA6 LINE L1 0 6300 6110 2090 117 0 44 chr2 61116986 61117303 -189570551 + AluSx SINE Alu 1 303 -9 269 239 14 14 chr2 61118628 61118699 -189569155 - MER63 DNA MER1_type -1 1059 989 710 187 24 0 chr2 61118709 61118832 -189569022 - MER63 DNA MER1_type -83 753 2 2478 117 17 6 chr2 61118857 61119217 -189568637 - THE1B LTR MaLR 0 364 1 272 270 70 9 chr2 61120243 61120358 -189567496 - L1ME3A LINE L1 -89 6150 6029 962 298 55 45 chr2 61120367 61121250 -189566604 - L1ME3A LINE L1 -313 5918 5020 947 270 52 52 chr2 61121273 61121909 -189565945 - L1ME3A LINE L1 -1758 4457 3822 1444 290 66 23 chr2 61121912 61122861 -189564993 - L1ME3A LINE L1 -2475 3740 2751 367 275 52 10 chr2 61123038 61123231 -189564623 - L1ME3A LINE L1 -4050 2346 2146 499 301 0 65 chr2 61123239 61123455 -189564399 - L1ME3A LINE L1 -4660 1736 1535 22 0 0 0 chr2 61123808 61123830 -189564024 + AT_rich Low_complexity Low_complexity 1 22 0 710 295 85 61 chr2 61124166 61124661 -189563193 - LTR33 LTR ERVL 0 521 15 255 367 53 20 chr2 61125550 61125700 -189562154 + MIR SINE MIR 1 155 -107 1173 301 132 33 chr2 61126780 61127725 -189560129 - L2 LINE L2 0 3313 2260 472 206 35 0 chr2 61128097 61128220 -189559634 - MER3 DNA MER1_type -86 123 11 444 339 109 8 chr2 61128498 61128746 -189559108 + MLT1I LTR MaLR 72 344 -65 263 275 75 0 chr2 61128780 61128860 -189558994 - MLT1J2 LTR MaLR -30 420 335 193 309 0 18 chr2 61129973 61130028 -189557826 - L2 LINE L2 0 3272 3219 321 68 0 0 chr2 61132187 61132231 -189555623 + (CA)n Simple_repeat Simple_repeat 2 45 0 327 246 132 24 chr2 61132237 61132404 -189555450 + L1MC4a LINE L1 7143 7327 -481 3187 210 81 19 chr2 61132492 61133704 -189554150 - L1MB8 LINE L1 -2 6176 4892 3470 26 2 2 chr2 61133704 61134121 -189553733 - L1PA2 LINE L1 0 6155 5739 2627 52 15 6 chr2 61134121 61134423 -189553431 + L1PA2 LINE L1 5422 5729 -426 479 265 82 55 chr2 61134379 61134670 -189553184 - L1MB8 LINE L1 -1204 4942 4644 * 1941 153 3 0 chr2 61134678 61134966 -189552888 - AluSx SINE Alu -23 289 1 5539 123 19 8 chr2 61135000 61135993 -189551861 - L1PB1 LINE L1 -4 6147 5142 1152 187 9 23 chr2 61137000 61137219 -189550635 + AluJo SINE Alu 5 220 -92 371 42 0 0 chr2 61137219 61137267 -189550587 + AluY SINE Alu 84 131 -170 319 277 58 50 chr2 61137938 61138069 -189549785 - L1MC/D LINE L1 -360 5804 5690 291 301 85 32 chr2 61138113 61138359 -189549495 - L1MC/D LINE L1 -544 5577 5319 1771 103 19 4 chr2 61138484 61138755 -189549099 + L1PA13 LINE L1 5886 6160 -3 432 82 0 16 chr2 61140239 61140300 -189547554 - LTR3b LTR ERVK -440 60 1 732 331 25 4 chr2 61140820 61141098 -189546756 + LTR16A LTR ERVL 167 450 0 923 320 46 22 chr2 61141170 61141583 -189546271 + HERV16 LTR ERVL 92 514 -4482 1002 305 64 16 chr2 61141811 61142247 -189545607 + HERV16 LTR ERVL 755 1211 -3785 1212 324 68 14 chr2 61142278 61142982 -189544872 + HERV16 LTR ERVL 2598 3397 -2088 377 316 51 35 chr2 61143496 61143752 -189544102 + ERVL LTR ERVL 5051 5310 -454 766 334 43 35 chr2 61143977 61144399 -189543455 + LTR16A LTR ERVL 26 450 0 352 354 21 16 chr2 61144399 61144591 -189543263 + L1M4 LINE L1 4489 4681 -1465 2106 49 0 0 chr2 61145527 61145790 -189542064 - L1PA4 LINE L1 -3 6152 5890 207 135 54 0 chr2 61147149 61147186 -189540668 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 2940 143 88 10 chr2 61147509 61148091 -189539763 + L1MA8 LINE L1 5645 6271 -20 13472 228 18 17 chr2 61148095 61152101 -189535753 - L1PA16 LINE L1 -9 6808 2777 3763 101 0 4 chr2 61152101 61152614 -189535240 - MER9 LTR ERVK 0 511 1 13472 228 18 17 chr2 61152614 61153905 -189533949 - L1PA16 LINE L1 -4040 2777 1489 427 331 7 7 chr2 61154758 61154912 -189532942 - L1PA16 LINE L1 -5270 1517 1364 589 350 38 48 chr2 61154962 61155457 -189532397 - L1PA16 LINE L1 -6206 581 92 197 330 211 18 chr2 61155679 61155958 -189531896 - L2 LINE L2 -149 3164 2832 250 313 42 0 chr2 61156141 61156237 -189531617 - L2 LINE L2 -790 2524 2425 40 21 0 0 chr2 61156648 61156695 -189531159 + AT_rich Low_complexity Low_complexity 1 47 0 663 242 52 36 chr2 61157680 61157874 -189529980 - MLT1G LTR MaLR 0 590 394 1743 173 28 0 chr2 61158001 61158290 -189529564 - AluJo SINE Alu -15 297 1 413 284 193 47 chr2 61158309 61158605 -189529249 - MLT1G LTR MaLR -237 353 15 706 298 77 8 chr2 61159136 61159371 -189528483 - MIR SINE MIR -11 251 1 204 67 0 0 chr2 61161133 61161163 -189526691 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2396 84 0 0 chr2 61161403 61161701 -189526153 - AluSc SINE Alu -11 298 1 197 196 20 0 chr2 61162597 61162648 -189525206 + GA-rich Low_complexity Low_complexity 2 53 0 233 269 48 67 chr2 61167165 61167269 -189520585 + MIR SINE MIR 16 117 -91 236 315 55 55 chr2 61167910 61168037 -189519817 + MER5B DNA MER1_type 1 127 -51 2191 119 0 0 chr2 61169142 61169452 -189518402 - AluY SINE Alu -1 310 1 385 284 126 36 chr2 61170111 61170389 -189517465 - L1M4 LINE L1 -2158 3988 3686 2026 172 71 12 chr2 61170459 61170867 -189516987 - MSTB1 LTR MaLR 0 432 1 247 146 0 0 chr2 61171240 61171281 -189516573 + L1MB3 LINE L1 4783 4823 -1323 4664 187 36 19 chr2 61171381 61172731 -189515123 + L1MB3 LINE L1 4821 6182 -1 366 355 74 5 chr2 61172801 61173004 -189514850 + MIR SINE MIR 31 247 -15 806 98 0 8 chr2 61173249 61173372 -189514482 + (GAAA)n Simple_repeat Simple_repeat 3 124 0 2265 98 0 3 chr2 61174800 61175095 -189512759 + AluSq SINE Alu 2 295 -18 259 312 112 32 chr2 61175353 61175478 -189512376 + MIR SINE MIR 51 185 -77 49 71 0 0 chr2 61176619 61176717 -189511137 + AT_rich Low_complexity Low_complexity 1 98 0 187 296 82 20 chr2 61179017 61179115 -189508739 + MIR SINE MIR 105 208 -54 1711 57 0 5 chr2 61179721 61179931 -189507923 + AluY SINE Alu 98 306 -5 1888 122 4 4 chr2 61181182 61181453 -189506401 + AluY SINE Alu 1 271 -40 234 236 0 69 chr2 61182402 61182474 -189505380 - MIR SINE MIR -16 246 180 2007 158 64 40 chr2 61182762 61183270 -189504584 - MLT2A2 LTR ERVL 0 515 1 591 221 43 95 chr2 61183646 61183877 -189503977 + MLT1J LTR MaLR 230 448 -63 278 341 94 24 chr2 61183937 61184107 -189503747 - MIR SINE MIR -59 203 22 526 308 41 6 chr2 61184935 61185107 -189502747 + MIR SINE MIR 3 180 -82 513 236 146 0 chr2 61185107 61185217 -189502637 + FLAM_A SINE Alu 1 126 -7 243 329 0 0 chr2 61186671 61186753 -189501101 + (TA)n Simple_repeat Simple_repeat 2 83 0 310 213 53 0 chr2 61189344 61189419 -189498435 + MER116 DNA Mariner 1 79 -1 193 164 30 119 chr2 61189500 61189567 -189498287 - L2 LINE L2 -3 3310 3250 968 114 34 2 chr2 61190733 61190972 -189496882 + GA-rich Low_complexity Low_complexity 2 425 0 24 67 0 0 chr2 61193391 61193436 -189494418 + AT_rich Low_complexity Low_complexity 1 45 0 1827 168 129 8 chr2 61196767 61197154 -189490700 - Tigger2a DNA MER2_type 0 434 1 916 223 22 27 chr2 61198727 61198951 -189488903 - MER58A DNA MER1_type -1 223 1 224 130 11 98 chr2 61199924 61200016 -189487838 + (TATAA)n Simple_repeat Simple_repeat 1 84 0 22 0 0 0 chr2 61200619 61200641 -189487213 + AT_rich Low_complexity Low_complexity 1 22 0 1438 16 0 22 chr2 61201296 61201479 -189486375 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 1031 182 17 0 chr2 61201783 61201964 -189485890 - MER5A DNA MER1_type -1 188 5 396 0 0 0 chr2 61202373 61202417 -189485437 + (TG)n Simple_repeat Simple_repeat 2 45 0 331 298 57 94 chr2 61203769 61204034 -189483820 + MIR SINE MIR 8 262 0 339 25 0 0 chr2 61204092 61204132 -189483722 + (CA)n Simple_repeat Simple_repeat 1 40 0 197 219 0 16 chr2 61206154 61206218 -189481636 + GA-rich Low_complexity Low_complexity 2 64 0 207 139 0 0 chr2 61206582 61206618 -189481236 + (T)n Simple_repeat Simple_repeat 1 36 0 1180 242 29 72 chr2 61207566 61208062 -189479792 + MER39 LTR ERV1 6 662 -45 2060 131 3 3 chr2 61208627 61208933 -189478921 - AluSx SINE Alu -2 310 5 1614 211 16 16 chr2 61208980 61209350 -189478504 - MLT1C LTR MaLR -4 463 94 2042 195 46 18 chr2 61209396 61209896 -189477958 + L1MA9 LINE L1 5761 6277 -35 280 314 98 55 chr2 61210066 61210302 -189477552 - L2 LINE L2 -468 2846 2601 2966 130 14 2 chr2 61211891 61212374 -189475480 - L1M2 LINE L1 -511 5780 5292 1047 266 24 18 chr2 61212381 61212764 -189475090 - L1 LINE L1 -2468 3678 3294 265 276 76 5 chr2 61212823 61213033 -189474821 + L1M4 LINE L1 3128 3352 -2794 371 272 95 25 chr2 61213555 61213838 -189474016 - L1M4 LINE L1 -2502 3644 3342 350 283 51 14 chr2 61213930 61214068 -189473786 - L1M4 LINE L1 -2927 3219 3077 2388 80 0 6 chr2 61214170 61214481 -189473373 + AluY SINE Alu 1 309 -2 9643 111 19 35 chr2 61214775 61216472 -189471382 + L1P LINE L1 1783 3451 -2695 9537 101 15 74 chr2 61216685 61217537 -189470317 - L1P LINE L1 -1558 4588 3891 808 11 0 0 chr2 61217537 61217627 -189470227 - L1PA5 LINE L1 -18 6136 6047 9537 101 15 74 chr2 61217627 61218539 -189469315 - L1P LINE L1 -2255 3891 2927 1593 272 77 7 chr2 61218681 61219240 -189468614 - L1MC4 LINE L1 -977 7065 6468 955 210 99 89 chr2 61219272 61219667 -189468187 + L1MC4 LINE L1 7349 7747 -295 300 229 0 14 chr2 61219645 61219715 -189468139 + L1MC4 LINE L1 7953 8021 -21 * 1715 149 29 13 chr2 61219954 61220263 -189467591 - L1PA16 LINE L1 -9 6157 5844 22 0 0 0 chr2 61220370 61220392 -189467462 + AT_rich Low_complexity Low_complexity 1 22 0 10926 104 15 35 chr2 61220816 61222812 -189465042 - L1P3 LINE L1 -4326 2135 172 237 206 32 16 chr2 61222917 61222980 -189464874 + CT-rich Low_complexity Low_complexity 4 67 0 21 0 0 0 chr2 61224059 61224080 -189463774 + AT_rich Low_complexity Low_complexity 1 21 0 785 206 144 89 chr2 61224377 61224760 -189463094 + L1MC5 LINE L1 7164 7567 -394 1302 258 69 22 chr2 61225680 61226564 -189461290 + L1M2c LINE L1 2689 3557 -4008 788 133 49 0 chr2 61226580 61226723 -189461131 + L1MA5A LINE L1 6142 6291 -6 730 296 0 9 chr2 61226746 61226966 -189460888 - L1M4 LINE L1 -2544 5021 4804 4020 189 41 24 chr2 61226993 61227774 -189460080 - MER52A LTR ERV1 0 1755 962 254 297 0 0 chr2 61227804 61227895 -189459959 + C-rich Low_complexity Low_complexity 1 91 0 10746 167 52 14 chr2 61228018 61231028 -189456826 - L1M4 LINE L1 -2890 4675 1555 334 231 19 19 chr2 61231146 61231302 -189456552 + (CCCA)n Simple_repeat Simple_repeat 2 157 0 230 139 47 62 chr2 61231254 61231383 -189456471 + (CACAC)n Simple_repeat Simple_repeat 5 131 0 * 992 267 35 56 chr2 61231496 61231773 -189456081 - L1M4c LINE L1 -4798 2310 2154 1813 99 8 0 chr2 61231773 61232015 -189455839 - AluSp SINE Alu -4 309 66 992 267 35 56 chr2 61232015 61232372 -189455482 - L1M4c LINE L1 -4954 2154 1791 1975 280 50 32 chr2 61232372 61233091 -189454763 - L1M4c LINE L1 -6298 732 1 361 279 142 0 chr2 61237955 61238138 -189449716 + MIR SINE MIR 35 243 -19 21 0 0 0 chr2 61238223 61238244 -189449610 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 61239025 61239056 -189448798 + AT_rich Low_complexity Low_complexity 1 31 0 1034 161 13 61 chr2 61239783 61240013 -189447841 - MER20 DNA MER1_type 0 219 1 1945 88 0 4 chr2 61240421 61240671 -189447183 - AluSc SINE Alu -5 304 56 221 222 28 56 chr2 61240917 61240989 -189446865 + CT-rich Low_complexity Low_complexity 1 70 0 2102 85 31 3 chr2 61241397 61241714 -189446140 + L1PA10 LINE L1 5843 6168 0 357 310 128 30 chr2 61241920 61242123 -189445731 + L1ME3 LINE L1 4795 5017 -1129 112 16 0 0 chr2 61242163 61242289 -189445565 + AT_rich Low_complexity Low_complexity 1 126 0 1297 172 5 9 chr2 61242289 61242504 -189445350 - AluJo SINE Alu -98 214 1 865 269 47 13 chr2 61242551 61243038 -189444816 + L1ME3 LINE L1 5042 5540 -626 298 283 10 10 chr2 61243033 61243132 -189444722 + L1ME3 LINE L1 6064 6162 0 * 703 77 0 0 chr2 61244038 61244129 -189443725 - MER46B DNA MER2_type 0 236 146 206 189 0 19 chr2 61244135 61244188 -189443666 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 1249 175 73 22 chr2 61244188 61244462 -189443392 - MER46B DNA MER2_type -73 163 1 233 141 141 64 chr2 61244402 61244480 -189443374 + MER46A DNA MER2_type 78 161 -75 * 266 336 112 9 chr2 61244560 61244667 -189443187 + L2 LINE L2 3154 3271 -1 210 275 110 0 chr2 61245465 61245556 -189442298 - MIR SINE MIR -49 213 113 193 243 0 0 chr2 61246228 61246265 -189441589 - L2 LINE L2 -10 3262 3226 192 152 0 0 chr2 61246519 61246552 -189441302 + (CA)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr2 61246566 61246590 -189441264 + AT_rich Low_complexity Low_complexity 1 24 0 1525 141 0 0 chr2 61247015 61247242 -189440612 + AluSg/x SINE Alu 81 307 -3 1592 183 119 6 chr2 61250054 61250382 -189437472 - MLT1A1 LTR MaLR 0 365 1 493 313 95 9 chr2 61250824 61251035 -189436819 + MIR SINE MIR 2 230 -32 1376 199 136 52 chr2 61251071 61251609 -189436245 + MER34C LTR ERV1 1 583 -2 305 339 35 0 chr2 61253931 61254046 -189433808 - MIR SINE MIR -91 171 53 696 307 91 22 chr2 61255811 61256458 -189431396 - L1ME3A LINE L1 -219 5951 5259 570 276 147 36 chr2 61256486 61257065 -189430789 - L1ME3A LINE L1 -874 5272 4630 22 70 0 0 chr2 61257174 61257217 -189430637 + AT_rich Low_complexity Low_complexity 1 43 0 874 124 15 0 chr2 61257457 61257594 -189430260 + THE1C LTR MaLR 237 375 0 3070 98 7 9 chr2 61257605 61258045 -189429809 + THE1C-int LTR MaLR 1142 1580 0 1902 153 35 50 chr2 61258050 61258482 -189429372 + THE1C LTR MaLR 5 428 0 824 218 23 9 chr2 61258497 61258717 -189429137 + L1MC4 LINE L1 7079 7301 -741 21 36 0 0 chr2 61258933 61258961 -189428893 + AT_rich Low_complexity Low_complexity 1 28 0 28 61 0 0 chr2 61259360 61259409 -189428445 + AT_rich Low_complexity Low_complexity 1 49 0 4363 207 25 25 chr2 61259422 61259484 -189428370 + L1MC3 LINE L1 5767 5828 -1957 2195 121 0 0 chr2 61259484 61259790 -189428064 + AluSq SINE Alu 1 306 -7 4363 207 25 25 chr2 61259790 61260831 -189427023 + L1MC3 LINE L1 5828 6829 -956 281 256 0 78 chr2 61261200 61261290 -189426564 - MER117 DNA MER1_type -5 192 110 928 106 53 0 chr2 61261417 61261568 -189426286 - HSMAR2 DNA Mariner -1143 159 1 372 320 0 27 chr2 61261791 61261941 -189425913 + C-rich Low_complexity Low_complexity 3 148 0 22 0 0 0 chr2 61263877 61263899 -189423955 + AT_rich Low_complexity Low_complexity 1 22 0 395 319 128 0 chr2 61264520 61264661 -189423193 + MIR3 SINE MIR 4 162 -46 225 94 0 0 chr2 61265944 61265976 -189421878 + (T)n Simple_repeat Simple_repeat 1 32 0 409 250 115 0 chr2 61267426 61267530 -189420324 + MIR SINE MIR 71 186 -76 3925 233 131 112 chr2 61269280 61270245 -189417609 - L1MD3 LINE L1 0 7995 7050 1290 138 29 9 chr2 61270245 61270455 -189417399 + MER30 DNA MER1_type 17 230 0 3925 233 131 112 chr2 61270455 61271701 -189416153 - L1MD3 LINE L1 -945 7050 5529 281 293 90 30 chr2 61271729 61271862 -189415992 - MIR SINE MIR -109 153 13 538 301 59 20 chr2 61273542 61273745 -189414109 - MIR SINE MIR -32 230 20 561 255 98 16 chr2 61274029 61274284 -189413570 + L1ME4a LINE L1 5601 5876 -245 219 327 13 20 chr2 61275115 61275265 -189412589 + L2 LINE L2 1952 2100 -1214 1929 127 141 0 chr2 61275279 61275634 -189412220 - L1MA8 LINE L1 -2 6289 5885 631 300 77 6 chr2 61276405 61276647 -189411207 - MIR SINE MIR 0 262 4 21 0 0 0 chr2 61277107 61277128 -189410726 + AT_rich Low_complexity Low_complexity 1 21 0 1909 101 72 7 chr2 61277725 61278001 -189409853 - AluSx SINE Alu -18 294 1 248 268 0 28 chr2 61279020 61279091 -189408763 + CT-rich Low_complexity Low_complexity 3 71 0 304 330 10 10 chr2 61279107 61279204 -189408650 - MER58 DNA MER1_type -118 97 1 21 57 0 0 chr2 61279931 61279966 -189407888 + AT_rich Low_complexity Low_complexity 1 35 0 4060 196 197 44 chr2 61281575 61282693 -189405161 - L1M1 LINE L1 -6261 1304 16 1436 212 52 53 chr2 61283020 61283542 -189404312 - MER39 LTR ERV1 0 683 1 24 53 0 0 chr2 61283630 61283668 -189404186 + AT_rich Low_complexity Low_complexity 1 38 0 2838 225 54 6 chr2 61286370 61287038 -189400816 + L1ME1 LINE L1 5462 6161 -5 1704 195 0 0 chr2 61288986 61289289 -189398565 + AluJb SINE Alu 1 303 -9 451 314 88 30 chr2 61289498 61290452 -189397402 - L1MEd LINE L1 -4661 1649 603 246 303 98 65 chr2 61290658 61291025 -189396829 - L1MEd LINE L1 -5737 382 4 988 214 0 57 chr2 61291177 61291387 -189396467 - MER58A DNA MER1_type -26 198 1 276 30 0 0 chr2 61292472 61292505 -189395349 + (TG)n Simple_repeat Simple_repeat 1 33 0 366 198 44 22 chr2 61292743 61292834 -189395020 - MER34C LTR ERV1 -2 583 491 259 287 69 40 chr2 61292967 61293068 -189394786 + MER5A DNA MER1_type 9 112 -77 387 317 184 17 chr2 61294013 61294552 -189393302 + L1ME4a LINE L1 5290 5918 -203 7242 125 15 6 chr2 61295003 61296529 -189391325 - L1MA1 LINE L1 0 6302 4764 928 163 139 5 chr2 61296522 61296731 -189391123 - L1MA1 LINE L1 -1798 4348 4112 * 257 290 81 32 chr2 61302291 61302415 -189385439 + MER94 DNA DNA 5 134 0 1181 187 30 122 chr2 61304268 61304670 -189383184 + MLT1A1 LTR MaLR 1 365 0 432 321 93 41 chr2 61305138 61305428 -189382426 + L1MEd LINE L1 593 897 -5222 25 31 0 0 chr2 61305583 61305615 -189382239 + AT_rich Low_complexity Low_complexity 1 32 0 212 100 25 0 chr2 61305697 61305737 -189382117 + (TA)n Simple_repeat Simple_repeat 2 42 0 1974 151 3 3 chr2 61306255 61306559 -189381295 + AluSx SINE Alu 1 304 -8 234 214 111 34 chr2 61306716 61306833 -189381021 + L1MEd LINE L1 889 1014 -5105 382 306 83 34 chr2 61306931 61307399 -189380455 + L1MEd LINE L1 1179 1669 -4641 215 330 0 0 chr2 61307604 61307698 -189380156 + A-rich Low_complexity Low_complexity 1 94 0 245 235 35 0 chr2 61307805 61307890 -189379964 + L1M4 LINE L1 4196 4283 -1863 1301 215 18 32 chr2 61307890 61308169 -189379685 + AluJo SINE Alu 1 275 -37 201 74 0 0 chr2 61308176 61308203 -189379651 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 381 277 89 28 chr2 61308212 61308573 -189379281 + L1M4 LINE L1 4287 4669 -1477 307 351 89 13 chr2 61308574 61308799 -189379055 + L1M4 LINE L1 4702 4943 -1203 22 0 0 0 chr2 61309341 61309363 -189378491 + AT_rich Low_complexity Low_complexity 1 22 0 374 287 67 51 chr2 61309588 61309842 -189378012 + L1MEc LINE L1 1005 1262 -5134 244 311 28 0 chr2 61309857 61309963 -189377891 + L1MEc LINE L1 1494 1602 -4794 * 463 271 181 27 chr2 61309956 61310595 -189377259 + L1MEc LINE L1 2672 3409 -2806 232 356 164 5 chr2 61310647 61310855 -189376999 + L1MEc LINE L1 131 371 -6025 990 291 82 53 chr2 61311239 61312239 -189375615 + L1MEc LINE L1 691 1763 -4633 578 243 126 19 chr2 61312284 61312498 -189375356 + L1MEc LINE L1 2720 2956 -3259 320 322 75 11 chr2 61312547 61312721 -189375133 + L1MEc LINE L1 3489 3673 -2542 673 242 68 73 chr2 61312749 61313145 -189374709 + L1MEc LINE L1 2252 2645 -3570 27 0 0 0 chr2 61313414 61313441 -189374413 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 61313581 61313604 -189374250 + AT_rich Low_complexity Low_complexity 1 23 0 1599 261 41 23 chr2 61313660 61314147 -189373707 + MLT1D LTR MaLR 1 496 -9 537 278 61 90 chr2 61314208 61314797 -189373057 + L1MEc LINE L1 3351 3922 -2293 1376 199 0 11 chr2 61314798 61315070 -189372784 + AluJb SINE Alu 36 304 -8 5636 241 32 23 chr2 61315072 61315412 -189372442 + L1MC1 LINE L1 3514 3850 -2296 973 177 199 48 chr2 61315412 61315784 -189372070 - MSTC LTR MaLR 0 428 1 5636 241 32 23 chr2 61315784 61317149 -189370705 + L1MC1 LINE L1 3850 5234 -912 2866 223 45 10 chr2 61317260 61317978 -189369876 + L1MC1 LINE L1 5254 5996 -337 2445 253 24 10 chr2 61318489 61319200 -189368654 + L1MC1 LINE L1 5612 6332 -1 8447 214 49 45 chr2 61319286 61321862 -189365992 + L1M2 LINE L1 2750 5330 -1518 2205 109 0 0 chr2 61322150 61322453 -189365401 - AluSx SINE Alu -9 303 1 26 0 0 0 chr2 61323084 61323110 -189364744 + AT_rich Low_complexity Low_complexity 1 26 0 1197 261 90 0 chr2 61323793 61324104 -189363750 - MLT1A1 LTR MaLR -2 363 25 316 222 33 22 chr2 61324316 61324406 -189363448 + MIR SINE MIR 172 262 0 291 219 134 70 chr2 61325293 61325494 -189362360 - L1ME3A LINE L1 -1 6169 5956 1459 274 82 60 chr2 61325590 61326610 -189361244 - L1MC5 LINE L1 -444 7517 6476 409 275 53 23 chr2 61328099 61328230 -189359624 + MIR SINE MIR 20 154 -108 24 85 0 0 chr2 61328579 61328638 -189359216 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr2 61328972 61328993 -189358861 + AT_rich Low_complexity Low_complexity 1 21 0 442 335 130 5 chr2 61332636 61332836 -189355018 + MIR SINE MIR 34 258 -4 24 32 0 0 chr2 61333299 61333330 -189354524 + AT_rich Low_complexity Low_complexity 1 31 0 339 306 15 65 chr2 61333780 61333979 -189353875 - LTR16C LTR ERVL 0 491 303 28 0 0 0 chr2 61334662 61334690 -189353164 + AT_rich Low_complexity Low_complexity 1 28 0 1976 276 94 17 chr2 61334796 61335795 -189352059 + L1ME LINE L1 3821 4896 -1250 736 223 59 37 chr2 61335822 61336088 -189351766 + L1ME2 LINE L1 5627 6122 -42 749 282 41 29 chr2 61336105 61336516 -189351338 + L1ME LINE L1 4910 5325 -821 646 309 23 19 chr2 61336527 61336792 -189351062 + L1ME LINE L1 5366 5631 -539 216 0 0 0 chr2 61337485 61337509 -189350345 + (TA)n Simple_repeat Simple_repeat 1 24 0 4931 67 11 2 chr2 61337515 61338147 -189349707 - L1PA7 LINE L1 -20 6134 5497 30 45 0 0 chr2 61338206 61338250 -189349604 + AT_rich Low_complexity Low_complexity 1 44 0 373 290 116 13 chr2 61338841 61338996 -189348858 - MIR SINE MIR -13 249 79 1791 142 3 17 chr2 61339027 61339323 -189348531 + AluSx SINE Alu 11 302 -10 2304 90 7 3 chr2 61339518 61339828 -189348026 + AluSx SINE Alu 1 311 -1 243 218 0 18 chr2 61339961 61340016 -189347838 + L2 LINE L2 2594 2647 -667 911 220 70 77 chr2 61340798 61341098 -189346756 - MLT1A1 LTR MaLR 0 365 68 9920 141 36 20 chr2 61341106 61342516 -189345338 + Tigger1 DNA MER2_type 24 1468 -950 1978 133 3 0 chr2 61342516 61342824 -189345030 - AluSq SINE Alu 0 309 1 9920 141 36 20 chr2 61342824 61343088 -189344766 + Tigger1 DNA MER2_type 1468 1726 -692 629 160 0 9 chr2 61343064 61343170 -189344684 + Tigger1 DNA MER2_type 2313 2417 -1 * 189 0 0 0 chr2 61343558 61343579 -189344275 + (T)n Simple_repeat Simple_repeat 1 21 0 354 23 0 0 chr2 61345687 61345730 -189342124 + (TG)n Simple_repeat Simple_repeat 2 44 0 265 267 164 41 chr2 61346172 61346318 -189341536 + L1ME1 LINE L1 5922 6085 -81 4186 120 22 5 chr2 61346473 61347117 -189340737 + L1PA15 LINE L1 5506 6160 -5 478 223 145 66 chr2 61348763 61348823 -189339031 + MER5A DNA MER1_type 11 65 -124 442 52 0 78 chr2 61348823 61348900 -189338954 + L1PA6 LINE L1 6084 6154 0 478 223 145 66 chr2 61348900 61349005 -189338849 + MER5A DNA MER1_type 65 189 0 457 246 28 95 chr2 61349014 61349193 -189338661 + MER5B DNA MER1_type 12 178 0 2216 238 190 53 chr2 61350239 61351143 -189336711 + L1M4 LINE L1 24 1051 -5491 2517 193 19 75 chr2 61351143 61351812 -189336042 + LTR27 LTR ERV1 3 634 -2 2236 246 56 33 chr2 61351812 61351934 -189335920 + L1M4 LINE L1 1044 1162 -5663 1593 245 13 55 chr2 61351934 61352461 -189335393 - MLT1D LTR MaLR 0 505 1 2236 246 56 33 chr2 61352461 61353644 -189334210 + L1M4 LINE L1 1162 2518 -4307 4381 261 26 20 chr2 61353664 61355219 -189332635 + L1M4 LINE L1 2925 4488 -2156 1872 241 65 16 chr2 61356336 61356538 -189331316 + L1M4 LINE L1 4479 4670 -1974 1976 172 103 3 chr2 61356538 61356927 -189330927 - MSTA LTR MaLR 0 428 1 1872 241 65 16 chr2 61356927 61357359 -189330495 + L1M4 LINE L1 4670 5144 -1500 524 206 0 26 chr2 61357356 61357511 -189330343 + L1P LINE L1 4982 5132 -1014 * 207 281 16 16 chr2 61358925 61358989 -189328865 - MER5B DNA MER1_type -35 143 80 207 0 0 0 chr2 61359571 61359594 -189328260 + (A)n Simple_repeat Simple_repeat 1 23 0 453 265 0 17 chr2 61361381 61361498 -189326356 + L2 LINE L2 3199 3313 0 344 357 169 15 chr2 61361540 61362102 -189325752 + L2 LINE L2 2618 3266 -6 730 264 35 0 chr2 61362179 61362376 -189325478 + MIR SINE MIR 56 259 -3 191 254 102 0 chr2 61363505 61363564 -189324290 + L2 LINE L2 2299 2363 -951 23 78 0 0 chr2 61363629 61363680 -189324174 + AT_rich Low_complexity Low_complexity 1 51 0 457 204 61 68 chr2 61367554 61367686 -189320168 + MIR SINE MIR 73 203 -59 1978 176 42 22 chr2 61367763 61368213 -189319641 - L1MA3 LINE L1 0 6305 5847 327 365 28 35 chr2 61368872 61369017 -189318837 + MIR3 SINE MIR 17 160 -48 580 228 152 6 chr2 61369017 61369175 -189318679 - MER5A DNA MER1_type 0 189 9 206 273 79 86 chr2 61369339 61369478 -189318376 - MIR3 SINE MIR -47 161 24 23 0 0 0 chr2 61369581 61369604 -189318250 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 61371194 61371233 -189316621 + AT_rich Low_complexity Low_complexity 1 39 0 422 36 18 0 chr2 61372856 61372912 -189314942 + (TA)n Simple_repeat Simple_repeat 1 57 0 207 179 0 0 chr2 61375095 61375134 -189312720 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 22 0 0 0 chr2 61377626 61377648 -189310206 + AT_rich Low_complexity Low_complexity 1 22 0 1831 176 26 41 chr2 61377704 61378120 -189309734 - L1MA9 LINE L1 -38 6274 5865 366 23 0 0 chr2 61378729 61378772 -189309082 + (CA)n Simple_repeat Simple_repeat 2 44 0 288 0 0 0 chr2 61379486 61379518 -189308336 + (A)n Simple_repeat Simple_repeat 1 32 0 219 36 0 0 chr2 61380193 61380221 -189307633 + (CA)n Simple_repeat Simple_repeat 1 28 0 823 116 58 0 chr2 61381207 61381345 -189306509 - L1MA9 LINE L1 0 6312 6167 306 0 0 0 chr2 61381349 61381383 -189306471 + (TG)n Simple_repeat Simple_repeat 1 34 0 234 132 0 0 chr2 61381409 61381477 -189306377 + L1MA7 LINE L1 6121 6156 -135 6844 150 27 4 chr2 61381499 61383734 -189304120 - L1MA3 LINE L1 -1 6304 4017 297 0 0 0 chr2 61384440 61384473 -189303381 + (A)n Simple_repeat Simple_repeat 1 33 0 241 244 24 12 chr2 61385815 61385897 -189301957 + (TA)n Simple_repeat Simple_repeat 1 83 0 24 0 0 0 chr2 61387147 61387171 -189300683 + AT_rich Low_complexity Low_complexity 1 24 0 2425 71 3 0 chr2 61387372 61387681 -189300173 + AluY SINE Alu 1 310 -1 905 243 72 61 chr2 61388691 61389224 -189298630 + MLT1G LTR MaLR 5 521 -34 267 306 0 0 chr2 61389240 61389302 -189298552 - L2 LINE L2 0 3313 3252 509 307 25 50 chr2 61390458 61390597 -189297257 - MIR SINE MIR -10 252 120 2307 90 0 13 chr2 61390597 61390908 -189296946 - AluSg SINE Alu -3 307 1 509 307 25 50 chr2 61390908 61391006 -189296848 - MIR SINE MIR -142 120 21 314 290 78 67 chr2 61391021 61391214 -189296640 - L3 LINE CR1 -16 1561 1367 208 346 47 9 chr2 61391371 61391478 -189296376 + L2 LINE L2 2942 3052 -220 1252 259 29 26 chr2 61392495 61392846 -189295008 + MER93a LTR ERV1 51 402 0 241 326 54 0 chr2 61394704 61394796 -189293058 + MIR SINE MIR 71 167 -95 504 190 100 0 chr2 61394973 61395073 -189292781 - MER103 DNA DNA 0 166 57 297 216 0 0 chr2 61395592 61395643 -189292211 + L2 LINE L2 3255 3305 -8 1770 179 51 11 chr2 61396443 61396794 -189291060 + MLT1A1 LTR MaLR 1 365 0 296 281 120 65 chr2 61396820 61397037 -189290817 + MIR SINE MIR 21 249 -13 217 342 214 20 chr2 61397832 61398028 -189289826 + MIR SINE MIR 23 256 -6 1895 147 27 15 chr2 61399371 61399704 -189288150 + MER1B DNA MER1_type 1 337 0 2293 91 7 0 chr2 61399776 61400073 -189287781 + AluSp SINE Alu 4 302 -11 21 0 0 0 chr2 61400248 61400269 -189287585 + AT_rich Low_complexity Low_complexity 1 21 0 291 299 10 31 chr2 61400279 61400376 -189287478 - MIR SINE MIR -109 153 59 539 262 8 8 chr2 61400483 61400605 -189287249 + MIR SINE MIR 90 211 -51 207 318 95 0 chr2 61401050 61401113 -189286741 + MIR SINE MIR 85 153 -109 22 70 0 0 chr2 61402938 61402981 -189284873 + AT_rich Low_complexity Low_complexity 1 43 0 22476 151 28 40 chr2 61404576 61406684 -189281170 - L1 LINE L1 -2181 5384 3252 300 27 0 0 chr2 61406684 61406721 -189281133 + (TG)n Simple_repeat Simple_repeat 2 38 0 22476 151 28 40 chr2 61406721 61406965 -189280889 - L1 LINE L1 -4313 3252 3007 1801 132 4 0 chr2 61406965 61407230 -189280624 - AluSg SINE Alu -15 295 30 22476 151 28 40 chr2 61407230 61410322 -189277532 - L1 LINE L1 -4558 3007 16 3927 175 30 45 chr2 61410327 61411829 -189276025 - L1MA9 LINE L1 -210 6166 4690 3631 232 55 13 chr2 61411841 61412984 -189274870 - L1MA9 LINE L1 -2451 3759 2569 2278 95 10 0 chr2 61412988 61413284 -189274570 - AluSc SINE Alu -2 307 9 3324 253 53 19 chr2 61413289 61415174 -189272680 - L1MA9 LINE L1 -3877 2333 662 1757 255 108 19 chr2 61415272 61415743 -189272111 - L1MA9 LINE L1 -5618 523 11 450 103 0 77 chr2 61416188 61416308 -189271546 - AluSp/q SINE Alu 0 324 211 21 57 0 0 chr2 61416309 61416344 -189271510 + AT_rich Low_complexity Low_complexity 1 35 0 183 156 0 0 chr2 61417026 61417058 -189270796 + CT-rich Low_complexity Low_complexity 1 32 0 2213 114 0 0 chr2 61417508 61417814 -189270040 - AluSg SINE Alu -4 306 1 210 318 191 36 chr2 61417973 61418083 -189269771 - L2 LINE L2 -5 3267 3141 189 154 0 0 chr2 61418747 61418786 -189269068 + GA-rich Low_complexity Low_complexity 3 41 0 2031 194 77 24 chr2 61419742 61420236 -189267618 - MLT2B1 LTR ERVL 0 520 1 21 0 0 0 chr2 61421865 61421886 -189265968 + AT_rich Low_complexity Low_complexity 1 21 0 1166 205 5 5 chr2 61423509 61423733 -189264121 - MER58A DNA MER1_type 0 224 1 2513 53 0 0 chr2 61424139 61424439 -189263415 + AluY SINE Alu 1 300 -11 518 306 16 33 chr2 61424568 61424751 -189263103 - MIR SINE MIR -25 237 58 25 0 0 0 chr2 61424933 61424958 -189262896 + AT_rich Low_complexity Low_complexity 1 25 0 312 266 13 0 chr2 61425304 61425383 -189262471 - MLT1I LTR MaLR -232 177 98 28 61 0 0 chr2 61425912 61425961 -189261893 + AT_rich Low_complexity Low_complexity 1 49 0 14673 125 20 32 chr2 61428921 61430496 -189257358 + Tigger1 DNA MER2_type 1 1594 -824 2212 112 3 3 chr2 61430496 61430800 -189257054 + AluSc SINE Alu 1 304 -5 14673 125 20 32 chr2 61430800 61431441 -189256413 + Tigger1 DNA MER2_type 1594 2187 -231 1223 209 20 57 chr2 61431441 61431742 -189256112 - AluJo SINE Alu -21 291 2 14673 125 20 32 chr2 61431742 61431972 -189255882 + Tigger1 DNA MER2_type 2187 2418 0 219 196 71 36 chr2 61432185 61432241 -189255613 - L2 LINE L2 -1 3271 3214 230 244 73 37 chr2 61432348 61432430 -189255424 - MIR SINE MIR -58 204 120 361 319 56 25 chr2 61434028 61434188 -189253666 - MIR3 SINE MIR -40 168 4 744 146 8 0 chr2 61435324 61435447 -189252407 + L1PA10 LINE L1 6040 6163 -5 1422 183 48 18 chr2 61435795 61436068 -189251786 + AluJo SINE Alu 1 281 -31 394 159 9 9 chr2 61437241 61437354 -189250500 + (TA)n Simple_repeat Simple_repeat 1 113 0 246 208 0 0 chr2 61438074 61438127 -189249727 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 228 163 138 12 chr2 61438127 61438207 -189249647 - L1MC4 LINE L1 -1339 6703 6614 215 191 48 0 chr2 61439678 61439741 -189248113 + (TG)n Simple_repeat Simple_repeat 1 66 0 976 300 61 45 chr2 61440637 61441155 -189246699 - L2 LINE L2 0 3313 2793 292 228 139 0 chr2 61441161 61441240 -189246614 - MIR SINE MIR -171 91 2 1763 149 7 4 chr2 61441479 61441785 -189246069 + AluJb SINE Alu 1 307 0 336 277 12 0 chr2 61441851 61441934 -189245920 - MIR3 SINE MIR -20 188 105 1728 126 4 0 chr2 61442097 61442360 -189245494 - L1PA15 LINE L1 0 6165 5902 269 306 67 22 chr2 61442613 61442793 -189245061 + MIR3 SINE MIR 7 194 -14 196 267 100 33 chr2 61443640 61443730 -189244124 + L2 LINE L2 3060 3155 -158 2562 148 2 35 chr2 61443739 61444197 -189243657 - Tigger2 DNA MER2_type -3 2715 2273 384 176 0 15 chr2 61444189 61444257 -189243597 - Tigger2 DNA MER2_type -2651 67 1 * 2134 108 19 7 chr2 61444286 61444593 -189243261 + AluSx SINE Alu 1 311 -1 352 293 41 24 chr2 61444597 61444720 -189243134 + L2 LINE L2 3189 3313 0 537 255 28 52 chr2 61445753 61445965 -189241889 - LTR40b LTR ERVL -50 412 206 2167 52 0 0 chr2 61446793 61447063 -189240791 + L1PA7 LINE L1 5877 6146 -8 227 333 67 37 chr2 61447306 61447441 -189240413 + MIR3 SINE MIR 46 184 -24 227 326 47 12 chr2 61448189 61448275 -189239579 + HAL1b LINE L1 439 527 -821 31 82 0 0 chr2 61449100 61449173 -189238681 + AT_rich Low_complexity Low_complexity 1 73 0 277 246 44 38 chr2 61449182 61449438 -189238416 + L1M4 LINE L1 2956 3211 -2935 375 187 58 13 chr2 61449761 61449916 -189237938 + (TA)n Simple_repeat Simple_repeat 2 163 0 25 102 0 0 chr2 61450319 61450407 -189237447 + AT_rich Low_complexity Low_complexity 1 88 0 432 241 0 76 chr2 61450426 61450571 -189237283 - L1MC5 LINE L1 -101 7860 7727 567 220 101 12 chr2 61450571 61450739 -189237115 - L1MC5 LINE L1 -443 7518 7336 1172 189 65 15 chr2 61450761 61451237 -189236617 - MER68 LTR ERV1 -25 537 1 261 57 0 0 chr2 61451245 61451280 -189236574 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1192 259 176 43 chr2 61451335 61452983 -189234871 - L1MC5 LINE L1 -714 7247 5366 210 329 0 14 chr2 61453697 61453767 -189234087 - L2 LINE L2 -337 2976 2908 184 237 26 0 chr2 61453816 61453854 -189234000 - L2 LINE L2 -540 2774 2736 244 257 56 23 chr2 61454285 61454499 -189233355 + L1ME1 LINE L1 2944 3164 -2982 311 263 42 103 chr2 61454780 61454993 -189232861 + L1M4 LINE L1 2723 2922 -3224 483 155 0 0 chr2 61455059 61455143 -189232711 - MLT1E2 LTR MaLR 0 505 422 1058 214 41 22 chr2 61455171 61455442 -189232412 - L1PA16 LINE L1 -3 6163 5888 6880 215 12 14 chr2 61455443 61457778 -189230076 - L1PA15 LINE L1 -2 6814 4426 258 176 0 0 chr2 61458348 61458399 -189229455 + CT-rich Low_complexity Low_complexity 2 52 0 5014 76 0 19 chr2 61458399 61459085 -189228769 - L1PA8A LINE L1 -40 6091 5419 8317 273 22 22 chr2 61459085 61462873 -189224981 - L1PA15 LINE L1 -2357 4440 44 1128 209 103 53 chr2 61462891 61463192 -189224662 - MLT1E2 LTR MaLR -310 316 1 579 244 0 0 chr2 61463714 61463837 -189224017 - MER58B DNA MER1_type 0 341 219 399 283 136 80 chr2 61463937 61464453 -189223401 + L1M4 LINE L1 3652 4196 -1950 212 200 22 0 chr2 61464776 61464821 -189223033 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 24 53 0 0 chr2 61464832 61464870 -189222984 + AT_rich Low_complexity Low_complexity 1 38 0 1484 230 99 15 chr2 61465230 61465704 -189222150 + L1ME1 LINE L1 3983 4496 -1650 3571 212 75 54 chr2 61465902 61466280 -189221574 + L1ME1 LINE L1 4475 4843 -1323 2340 103 0 0 chr2 61466280 61466582 -189221272 - AluSx SINE Alu -10 302 1 3571 212 75 54 chr2 61466582 61467865 -189219989 + L1ME1 LINE L1 4843 6166 0 2263 180 47 70 chr2 61468064 61468591 -189219263 + MLT2B2 LTR ERVL 1 515 0 408 71 0 0 chr2 61470525 61470581 -189217273 + (CA)n Simple_repeat Simple_repeat 1 56 0 387 222 34 17 chr2 61470946 61471063 -189216791 + L1ME1 LINE L1 6048 6166 0 2195 69 7 42 chr2 61471350 61471656 -189216198 + AluSc SINE Alu 1 295 -14 229 346 79 0 chr2 61471874 61472001 -189215853 + L3 LINE CR1 1424 1560 -17 2717 13 0 0 chr2 61472216 61472519 -189215335 - AluYb8 SINE Alu -15 303 1 721 329 42 0 chr2 61472568 61472805 -189215049 + MIR SINE MIR 6 252 -10 6090 180 60 14 chr2 61474303 61475595 -189212259 - Charlie1a DNA MER1_type 0 1455 104 345 275 0 12 chr2 61475598 61475678 -189212176 - MER2 DNA MER2_type 0 345 267 274 182 0 0 chr2 61475849 61475893 -189211961 - MER2 DNA MER2_type -300 45 2 463 287 0 0 chr2 61475893 61475994 -189211860 - Charlie1a DNA MER1_type -1351 104 4 847 166 7 0 chr2 61476393 61476538 -189211316 + MER2 DNA MER2_type 65 210 -135 1581 171 43 17 chr2 61477266 61477565 -189210289 + AluSx SINE Alu 1 307 -5 241 227 23 68 chr2 61477783 61477871 -189209983 + HAL1 LINE L1 2416 2499 -8 22 35 0 0 chr2 61478649 61478678 -189209176 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr2 61479217 61479247 -189208607 + AT_rich Low_complexity Low_complexity 1 30 0 762 149 0 9 chr2 61479517 61479631 -189208223 + FLAM_C SINE Alu 12 124 -19 294 143 0 0 chr2 61479637 61479686 -189208168 + (CA)n Simple_repeat Simple_repeat 2 50 0 240 35 0 0 chr2 61480214 61480243 -189207611 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2157 95 0 0 chr2 61481193 61481504 -189206350 + AluSx SINE Alu 9 319 0 263 288 14 0 chr2 61481667 61481740 -189206114 + L2 LINE L2 3240 3313 0 2020 126 24 3 chr2 61481844 61482138 -189205716 + AluSq SINE Alu 1 300 -13 612 159 147 6 chr2 61483142 61483305 -189204549 - MER53 DNA DNA 0 189 4 218 133 0 22 chr2 61483810 61483855 -189203999 + (CA)n Simple_repeat Simple_repeat 1 44 0 416 316 53 0 chr2 61485148 61485300 -189202554 + L1MEd LINE L1 938 1097 -5022 6789 205 42 5 chr2 61485351 61486682 -189201172 + ERVL LTR ERVL 534 1914 -3850 733 268 6 6 chr2 61486682 61486850 -189201004 + MLT2B1 LTR ERVL 288 455 -65 303 28 0 0 chr2 61486850 61486886 -189200968 + (TC)n Simple_repeat Simple_repeat 1 36 0 257 271 0 0 chr2 61486886 61486945 -189200909 + (TA)n Simple_repeat Simple_repeat 1 59 0 2298 164 28 23 chr2 61486988 61487420 -189200434 + Tigger2a DNA MER2_type 1 434 0 288 276 125 0 chr2 61487422 61487654 -189200200 + L1MEd LINE L1 2313 2573 -3556 438 226 47 94 chr2 61487729 61487963 -189199891 + L1MEd LINE L1 2726 2948 -3181 207 167 0 0 chr2 61487999 61488041 -189199813 + GA-rich Low_complexity Low_complexity 3 44 0 183 80 0 0 chr2 61488166 61488191 -189199663 + (GGAA)n Simple_repeat Simple_repeat 2 26 0 381 251 42 66 chr2 61488198 61488365 -189199489 + L1MEd LINE L1 3013 3175 -2954 1127 198 54 95 chr2 61488419 61488797 -189199057 - MLT1A1 LTR MaLR 0 365 1 455 289 43 86 chr2 61488878 61489227 -189198627 - Charlie7 DNA MER1_type -2257 355 22 677 299 17 0 chr2 61489775 61489949 -189197905 + MIR SINE MIR 4 180 -82 23 0 0 0 chr2 61490748 61490771 -189197083 + AT_rich Low_complexity Low_complexity 1 23 0 196 39 0 135 chr2 61491292 61491344 -189196510 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 379 220 33 11 chr2 61491526 61491617 -189196237 - MER21B LTR ERV1 -125 738 646 617 226 24 31 chr2 61491618 61491777 -189196077 + MER34C LTR ERV1 4 140 -445 2147 38 11 0 chr2 61491781 61492042 -189195812 + MER41A LTR ERV1 291 554 0 787 258 28 95 chr2 61492046 61492446 -189195408 - MER21B LTR ERV1 -490 373 1 21 0 0 0 chr2 61492716 61492737 -189195117 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 61493151 61493181 -189194673 + AT_rich Low_complexity Low_complexity 1 30 0 2439 31 41 0 chr2 61493233 61493526 -189194328 + AluY SINE Alu 1 305 -6 331 395 39 0 chr2 61494259 61494388 -189193466 - L2 LINE L2 -5 3267 3134 627 221 37 0 chr2 61494575 61494711 -189193143 + MLT1D LTR MaLR 365 505 0 497 292 89 20 chr2 61494987 61495189 -189192665 + MIR SINE MIR 32 247 -15 23 0 0 0 chr2 61495275 61495298 -189192556 + AT_rich Low_complexity Low_complexity 1 23 0 859 236 88 0 chr2 61495707 61495923 -189191931 + MIR SINE MIR 28 262 0 2050 83 10 47 chr2 61496001 61496301 -189191553 - AluSx SINE Alu -23 289 1 2076 133 0 7 chr2 61497628 61497936 -189189918 - AluSx SINE Alu -6 306 1 299 278 68 68 chr2 61499704 61499864 -189187990 + L1MC4a LINE L1 5706 5868 -1940 1403 206 31 11 chr2 61499864 61500151 -189187703 - AluJo SINE Alu -19 293 1 299 278 68 68 chr2 61500151 61500224 -189187630 + L1MC4a LINE L1 5867 5939 -1869 755 238 34 40 chr2 61500523 61500952 -189186902 - Charlie4a DNA MER1_type -5 503 18 1850 160 3 0 chr2 61502247 61502535 -189185319 + AluJb SINE Alu 8 296 -16 2206 168 30 34 chr2 61502602 61503167 -189184687 - L1MB3 LINE L1 -1 6182 5659 1137 60 0 66 chr2 61503625 61503792 -189184062 - AluY SINE Alu -12 299 144 721 284 21 12 chr2 61504745 61504988 -189182866 + MIR SINE MIR 2 246 -16 1422 180 55 55 chr2 61506354 61506665 -189181189 - AluJb SINE Alu -1 311 1 22 56 0 0 chr2 61506706 61506742 -189181112 + AT_rich Low_complexity Low_complexity 1 36 0 1718 35 0 0 chr2 61507984 61508187 -189179667 - L1PA5 LINE L1 -377 5778 5576 2905 37 0 8 chr2 61508187 61508530 -189179324 + L1PA5 LINE L1 5790 6139 -15 375 83 0 0 chr2 61508530 61508590 -189179264 + (TA)n Simple_repeat Simple_repeat 2 61 0 445 149 0 0 chr2 61509979 61510053 -189177801 - L1P LINE L1 -1074 5072 4999 350 298 21 0 chr2 61510193 61510287 -189177567 - L2 LINE L2 -963 2351 2256 717 251 82 4 chr2 61510441 61510802 -189177052 + MLT1G LTR MaLR 125 567 -23 291 286 0 0 chr2 61510901 61510985 -189176869 - L2 LINE L2 -1227 2087 2004 1430 167 73 35 chr2 61511892 61512180 -189175674 - MLT1A1 LTR MaLR 0 365 67 2642 191 9 11 chr2 61512182 61512648 -189175206 + MER70A LTR ERVL 8 472 0 482 142 13 11 chr2 61512648 61512729 -189175125 - MLT1A2 LTR MaLR -312 78 1 1819 157 194 0 chr2 61512899 61513276 -189174578 + MLT1D LTR MaLR 56 505 0 373 360 126 37 chr2 61513716 61514217 -189173637 + L2 LINE L2 2652 3194 -78 236 279 82 0 chr2 61514452 61514513 -189173341 - L2 LINE L2 0 3313 3248 701 230 13 7 chr2 61516433 61516585 -189171269 + MER3 DNA MER1_type 2 154 -55 1709 190 18 0 chr2 61516596 61516880 -189170974 - AluJb SINE Alu -21 291 3 303 226 91 32 chr2 61517423 61517609 -189170245 + L1M3 LINE L1 5307 5452 -728 215 167 0 24 chr2 61517610 61517652 -189170202 - L2 LINE L2 -4 3268 3228 677 243 73 109 chr2 61517656 61517737 -189170117 + MER34 LTR ERV1 4 86 -456 1835 113 150 12 chr2 61517737 61518063 -189169791 + THE1C LTR MaLR 1 371 -4 677 243 73 109 chr2 61518063 61518503 -189169351 + MER34 LTR ERV1 86 506 -36 355 286 84 56 chr2 61518563 61518776 -189169078 + L1MC4a LINE L1 5711 5929 -1879 296 241 91 67 chr2 61519294 61519547 -189168307 + L1ME4a LINE L1 5849 6107 -14 1260 133 17 64 chr2 61519550 61519784 -189168070 - AluJo SINE Alu 0 312 90 21 36 0 0 chr2 61519793 61519821 -189168033 + AT_rich Low_complexity Low_complexity 1 28 0 4213 151 69 28 chr2 61520950 61521792 -189166062 + MER4D LTR ERV1 1 664 0 22 0 0 0 chr2 61521809 61521831 -189166023 + AT_rich Low_complexity Low_complexity 1 22 0 573 317 28 0 chr2 61522779 61522959 -189164895 - MLT1L LTR MaLR -7 608 424 1787 213 203 9 chr2 61522969 61523537 -189164317 - L1ME1 LINE L1 -4 6162 5485 537 204 68 100 chr2 61523525 61523834 -189164020 - L1ME1 LINE L1 -956 5190 4892 * 240 301 41 65 chr2 61523922 61524045 -189163809 - MLT1L LTR MaLR -345 270 151 759 290 73 40 chr2 61524078 61524475 -189163379 - L2 LINE L2 -52 3261 2852 572 167 120 134 chr2 61524484 61524700 -189163154 + MER20 DNA MER1_type 7 219 0 592 266 143 21 chr2 61524704 61524990 -189162864 - L2 LINE L2 -518 2796 2476 2230 93 0 3 chr2 61525491 61525792 -189162062 - AluSq SINE Alu -13 300 1 195 182 0 0 chr2 61527959 61527992 -189159862 - L2 LINE L2 -6 3307 3275 791 216 11 11 chr2 61529009 61529194 -189158660 + MER105 DNA DNA 6 190 -14 180 0 0 0 chr2 61529532 61529552 -189158302 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 955 167 150 24 chr2 61529729 61530016 -189157838 - MER33 DNA MER1_type 0 324 2 2193 119 0 0 chr2 61530490 61530792 -189157062 - AluSx SINE Alu -10 302 1 181 254 306 57 chr2 61531741 61531934 -189155920 + MIR SINE MIR 19 259 -3 1658 159 45 3 chr2 61531978 61532267 -189155587 + AluSx SINE Alu 1 301 -11 24 32 0 0 chr2 61533230 61533261 -189154593 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 61533698 61533727 -189154127 + AT_rich Low_complexity Low_complexity 1 29 0 316 298 0 26 chr2 61538365 61538491 -189149363 - MIR SINE MIR -23 239 85 7928 130 32 3 chr2 61541598 61542827 -189145027 + Tigger1 DNA MER2_type 1 1264 -1154 562 181 14 9 chr2 61542941 61543160 -189144694 + L1MA4A LINE L1 6000 6280 -23 6952 149 19 6 chr2 61543165 61544315 -189143539 + Tigger1 DNA MER2_type 1249 2413 -5 1204 223 98 30 chr2 61544851 61545188 -189142666 - L1MD2 LINE L1 -264 6355 5996 * 3285 250 64 35 chr2 61545182 61546472 -189141382 - L1MD2 LINE L1 -1419 4987 3661 1778 170 49 71 chr2 61546490 61547056 -189140798 + MLT2A2 LTR ERVL 1 554 0 22 0 0 0 chr2 61547083 61547105 -189140749 + AT_rich Low_complexity Low_complexity 1 22 0 303 234 158 6 chr2 61547128 61547286 -189140568 - L1MD2 LINE L1 -2846 3560 3379 1602 254 92 60 chr2 61547324 61547565 -189140289 - L1MD2 LINE L1 -4313 2093 1861 1996 140 0 0 chr2 61547565 61547857 -189139997 - AluSx SINE Alu 0 312 21 1602 254 92 60 chr2 61547857 61548898 -189138956 - L1MD2 LINE L1 -4545 1861 802 910 204 19 24 chr2 61549643 61549854 -189138000 - L1MC2 LINE L1 -26 6598 6389 749 213 0 0 chr2 61549855 61549996 -189137858 - FLAM_A SINE Alu 0 142 2 6297 202 40 16 chr2 61549998 61552535 -189135319 - L1MC2 LINE L1 -223 6401 3803 3144 218 92 10 chr2 61552541 61553251 -189134603 - L1MC2 LINE L1 -3063 3363 2713 2921 95 53 2 chr2 61553251 61553289 -189134565 - MLT2A2 LTR ERVL 0 453 418 267 104 0 0 chr2 61553289 61553337 -189134517 + (TA)n Simple_repeat Simple_repeat 1 48 0 2921 95 53 2 chr2 61553337 61553729 -189134125 - MLT2A2 LTR ERVL -35 418 1 3144 218 92 10 chr2 61553729 61554466 -189133388 - L1MC2 LINE L1 -3713 2713 1796 325 197 28 14 chr2 61554463 61554534 -189133320 - L1MC2 LINE L1 -5362 545 474 * 4585 141 28 1 chr2 61554548 61555288 -189132566 - L1PA15 LINE L1 -3 6162 5403 600 206 42 30 chr2 61555289 61555454 -189132400 - L1MC2 LINE L1 -5417 490 324 * 774 179 59 40 chr2 61555446 61555718 -189132136 - L1MC2 LINE L1 -5971 455 27 1704 187 39 20 chr2 61555846 61556204 -189131650 - MER47A DNA MER2_type 0 366 2 396 260 40 31 chr2 61556208 61556390 -189131464 - L1M4 LINE L1 -2646 3500 3319 903 238 58 55 chr2 61556493 61556821 -189131033 - L1MC4a LINE L1 -1 7807 7479 4190 164 16 32 chr2 61557680 61558495 -189129359 - L1MB2 LINE L1 -47 6124 5323 699 177 8 0 chr2 61558495 61558619 -189129235 - FLAM_C SINE Alu -12 131 7 297 151 104 0 chr2 61558628 61558719 -189129135 - L1MB2 LINE L1 -816 5330 5227 1610 216 244 50 chr2 61558723 61559208 -189128646 - L1MC4 LINE L1 -472 7570 7180 183 80 0 0 chr2 61559208 61559233 -189128621 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1610 216 244 50 chr2 61559233 61559282 -189128572 - L1MC4 LINE L1 -862 7180 7142 340 157 143 0 chr2 61559282 61559352 -189128502 + MADE1 DNA Mariner 1 80 0 1610 216 244 50 chr2 61559352 61559530 -189128324 - L1MC4 LINE L1 -900 7142 6719 426 285 88 7 chr2 61559664 61559801 -189128053 - L2 LINE L2 -1 3312 3165 235 198 58 12 chr2 61559802 61559888 -189127966 - L1M4 LINE L1 -3161 2985 2896 752 293 117 40 chr2 61559891 61560508 -189127346 - L1M4 LINE L1 -3352 2794 2131 1045 254 108 35 chr2 61560712 61561054 -189126800 - HsTC2 DNA Tc2 -1522 376 10 26 50 0 0 chr2 61561063 61561103 -189126751 + AT_rich Low_complexity Low_complexity 1 40 0 228 139 0 0 chr2 61561440 61561476 -189126378 + HsTC2 DNA Tc2 1850 1885 -13 378 0 0 0 chr2 61561510 61561552 -189126302 + (TG)n Simple_repeat Simple_repeat 2 43 0 24 0 0 0 chr2 61562567 61562591 -189125263 + AT_rich Low_complexity Low_complexity 1 24 0 29 28 0 0 chr2 61562689 61562725 -189125129 + AT_rich Low_complexity Low_complexity 1 36 0 246 208 0 104 chr2 61562825 61562902 -189124952 + L2 LINE L2 3244 3312 -1 502 333 63 17 chr2 61563461 61563698 -189124156 + MIR SINE MIR 3 250 -12 233 277 85 64 chr2 61564060 61564154 -189123700 + L2 LINE L2 3198 3293 -20 213 39 0 0 chr2 61565573 61565599 -189122255 + (T)n Simple_repeat Simple_repeat 1 26 0 25 65 0 0 chr2 61565777 61565823 -189122031 + AT_rich Low_complexity Low_complexity 1 46 0 1207 271 43 72 chr2 61566134 61566714 -189121140 - MLT1F1 LTR MaLR -2 565 3 218 330 155 0 chr2 61566793 61566896 -189120958 - MIR SINE MIR -32 230 112 322 320 60 34 chr2 61566967 61567181 -189120673 + L1ME4a LINE L1 5740 5963 -158 2353 83 0 0 chr2 61567359 61567648 -189120206 + AluSc SINE Alu 1 289 -20 311 238 12 0 chr2 61569551 61569631 -189118223 - MIR SINE MIR -129 133 53 2441 71 0 13 chr2 61569766 61570074 -189117780 + AluSq SINE Alu 1 304 -9 447 196 64 132 chr2 61570090 61570188 -189117666 + MER3 DNA MER1_type 9 87 -122 4210 158 19 56 chr2 61570188 61571068 -189116786 + L1MC1 LINE L1 5486 6333 0 447 196 64 132 chr2 61571068 61571173 -189116681 + MER3 DNA MER1_type 87 198 -11 233 271 82 73 chr2 61571353 61571656 -189116198 + L1MC/D LINE L1 5283 5588 -2220 2937 187 50 19 chr2 61571677 61572312 -189115542 - L1ME1 LINE L1 -5 6161 5507 9995 32 7 0 chr2 61572321 61574303 -189113551 - L1PA5 LINE L1 -5 6149 4160 821 286 101 64 chr2 61574331 61574667 -189113187 - L1ME1 LINE L1 -1196 4950 4628 2491 54 3 0 chr2 61574667 61574965 -189112889 + AluY SINE Alu 2 300 -11 821 286 101 64 chr2 61574965 61576436 -189111418 - L1ME1 LINE L1 -1518 4628 3077 635 325 92 32 chr2 61576457 61577011 -189110843 - L1ME1 LINE L1 -3123 3023 2437 36 23 0 0 chr2 61577182 61577225 -189110629 + AT_rich Low_complexity Low_complexity 1 43 0 7028 125 42 8 chr2 61577225 61578419 -189109435 + Tigger3b DNA MER2_type 1 1230 -1 706 254 67 0 chr2 61579409 61579574 -189108280 + MIR3 SINE MIR 30 205 -3 22 88 0 0 chr2 61580255 61580312 -189107542 + AT_rich Low_complexity Low_complexity 1 57 0 285 229 35 62 chr2 61580993 61581137 -189106717 - L1MC5 LINE L1 -184 7777 7638 188 360 0 0 chr2 61581257 61581346 -189106508 + MIR3 SINE MIR 108 196 -12 248 354 61 0 chr2 61581477 61581559 -189106295 + L2 LINE L2 3168 3254 -18 13615 194 35 15 chr2 61581870 61585200 -189102654 + L1P5 LINE L1 2820 6210 -662 195 42 0 0 chr2 61588154 61588178 -189099676 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 409 310 120 20 chr2 61588485 61588685 -189099169 + MIR SINE MIR 32 251 -11 2235 129 13 29 chr2 61589059 61589440 -189098414 - THE1C LTR MaLR 0 375 1 685 296 68 49 chr2 61590256 61590621 -189097233 - LTR16B LTR ERVL -12 452 81 802 158 8 15 chr2 61591125 61591258 -189096596 + AluJo SINE Alu 3 134 -178 657 184 63 63 chr2 61591501 61591675 -189096179 - MER58C DNA MER1_type -4 211 38 512 309 39 21 chr2 61591778 61592011 -189095843 + MIR SINE MIR 20 256 -6 3042 163 73 33 chr2 61592152 61592681 -189095173 - LTR48 LTR ERV1 0 787 228 2240 89 0 13 chr2 61592681 61592983 -189094871 + AluSg SINE Alu 1 298 -12 3042 163 73 33 chr2 61592983 61593084 -189094770 - LTR48 LTR ERV1 -559 228 132 2395 94 77 28 chr2 61593086 61593513 -189094341 - LTR7 LTR ERV1 -2 448 1 2393 85 53 13 chr2 61593513 61593890 -189093964 - HERVH LTR ERV1 0 7713 7322 1395 122 18 9 chr2 61593888 61594109 -189093745 - HERVH LTR ERV1 -1894 5819 5597 * 4226 151 3 1 chr2 61594106 61594767 -189093087 - HERVH LTR ERV1 -2564 5149 4488 3250 118 6 4 chr2 61594769 61595270 -189092584 - HERVH LTR ERV1 -3720 3993 3492 867 149 20 0 chr2 61595260 61595408 -189092446 - HERVH LTR ERV1 -4423 3290 3140 * 19945 96 21 8 chr2 61595402 61598350 -189089504 - HERVH LTR ERV1 -4726 2987 1 2556 97 60 21 chr2 61598352 61598783 -189089071 - LTR7 LTR ERV1 -2 448 1 692 163 35 57 chr2 61598783 61598868 -189088986 - MER39 LTR ERV1 -569 138 56 1898 75 115 39 chr2 61598868 61599147 -189088707 + AluSx SINE Alu 1 300 -12 692 163 35 57 chr2 61599147 61599202 -189088652 - MER39 LTR ERV1 -651 56 1 27 0 0 0 chr2 61599327 61599354 -189088500 + AT_rich Low_complexity Low_complexity 1 27 0 40 21 0 0 chr2 61599411 61599458 -189088396 + AT_rich Low_complexity Low_complexity 1 47 0 2273 119 3 3 chr2 61599832 61600143 -189087711 - AluSx SINE Alu -1 311 1 1686 184 130 16 chr2 61600233 61600656 -189087198 + MER67D LTR ERV1 1 471 -43 355 314 245 10 chr2 61600690 61600894 -189086960 + MIR SINE MIR 11 262 0 2496 117 42 33 chr2 61601901 61602330 -189085524 - Tigger2a DNA MER2_type 0 434 2 1880 122 49 14 chr2 61603232 61603520 -189084334 + AluJb SINE Alu 1 298 -14 261 253 23 11 chr2 61605345 61605432 -189082422 + L1MC4 LINE L1 6616 6703 -1339 216 97 0 0 chr2 61606194 61606225 -189081629 + (TGGA)n Simple_repeat Simple_repeat 3 33 0 2177 120 0 0 chr2 61607991 61608283 -189079571 - AluSx SINE Alu -19 293 2 456 300 89 20 chr2 61608285 61608515 -189079339 + MIR SINE MIR 5 249 -13 22 0 0 0 chr2 61609164 61609186 -189078668 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 61610615 61610636 -189077218 + AT_rich Low_complexity Low_complexity 1 21 0 733 123 0 0 chr2 61613322 61613428 -189074426 - MER46A DNA MER2_type -1 235 130 3174 147 132 8 chr2 61613637 61613982 -189073872 + MER39 LTR ERV1 1 302 -405 2876 6 0 0 chr2 61613982 61614293 -189073561 + AluYb8 SINE Alu 1 311 -7 3174 147 132 8 chr2 61614293 61614575 -189073279 + MER39 LTR ERV1 302 706 -1 2167 105 0 7 chr2 61616041 61616337 -189071517 - AluSg SINE Alu -16 294 1 418 79 11 45 chr2 61616413 61616502 -189071352 + (TA)n Simple_repeat Simple_repeat 2 87 0 306 220 30 30 chr2 61616503 61616603 -189071251 - L1MC4 LINE L1 -1339 6703 6604 670 82 28 50 chr2 61616603 61616785 -189071069 + (TA)n Simple_repeat Simple_repeat 2 179 0 629 60 0 90 chr2 61616809 61617112 -189070742 + (TA)n Simple_repeat Simple_repeat 1 275 0 21 0 0 0 chr2 61618022 61618043 -189069811 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 61621445 61621475 -189066379 + AT_rich Low_complexity Low_complexity 1 30 0 987 155 83 0 chr2 61623521 61623702 -189064152 + L1MA9 LINE L1 5600 5795 -496 229 172 52 0 chr2 61623761 61623819 -189064035 + L1MCa LINE L1 2004 2064 -4362 282 160 0 0 chr2 61623822 61623872 -189063982 + (CATA)n Simple_repeat Simple_repeat 4 53 0 2861 117 59 8 chr2 61623872 61624366 -189063488 + L1MA9 LINE L1 5789 6307 -5 2396 82 0 0 chr2 61625166 61625457 -189062397 - AluSc SINE Alu -18 291 1 1815 32 0 0 chr2 61625992 61626208 -189061646 - L1PA6 LINE L1 -255 5899 5684 6764 230 71 83 chr2 61627840 61630233 -189057621 - L1ME2 LINE L1 -112 6121 3782 459 46 62 0 chr2 61630233 61630298 -189057556 - MER41A LTR ERV1 -85 469 401 6764 230 71 83 chr2 61630298 61631928 -189055926 - L1ME2 LINE L1 -2451 3782 2133 306 0 0 0 chr2 61631950 61631984 -189055870 + (T)n Simple_repeat Simple_repeat 1 34 0 309 26 0 0 chr2 61632673 61632711 -189055143 + (T)n Simple_repeat Simple_repeat 1 38 0 1022 233 27 9 chr2 61632729 61632948 -189054906 + MER58A DNA MER1_type 2 224 0 1013 185 108 0 chr2 61632960 61633219 -189054635 - MER33 DNA MER1_type -5 319 33 1034 269 75 12 chr2 61633227 61633643 -189054211 - L1ME2 LINE L1 -4328 2068 1627 1590 227 127 43 chr2 61633689 61634265 -189053589 - L1MD2 LINE L1 -18 6735 6112 * 2769 211 80 99 chr2 61634263 61634839 -189053015 - L1MD2 LINE L1 -2099 4441 3856 506 185 12 12 chr2 61634839 61634948 -189052906 - MER58B DNA MER1_type 0 341 107 2769 211 80 99 chr2 61634948 61635265 -189052589 - L1MD2 LINE L1 -2684 3856 3465 570 148 7 87 chr2 61635265 61635414 -189052440 - L1MA8 LINE L1 0 6291 6155 2769 211 80 99 chr2 61635414 61635643 -189052211 - L1MD2 LINE L1 -3075 3465 3233 1256 265 122 10 chr2 61635643 61636160 -189051694 - L1M4 LINE L1 -3014 3132 2558 225 279 0 0 chr2 61636654 61636722 -189051132 + C-rich Low_complexity Low_complexity 1 68 0 351 311 33 52 chr2 61636736 61636948 -189050906 - L1MD2 LINE L1 -6122 418 211 353 250 178 22 chr2 61637091 61637271 -189050583 - L1ME2 LINE L1 -4760 1636 1429 642 288 118 34 chr2 61637289 61637521 -189050333 - L1ME2 LINE L1 -5011 1385 1174 320 0 25 0 chr2 61637521 61637561 -189050293 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 642 288 118 34 chr2 61637561 61637954 -189049900 - L1ME2 LINE L1 -5222 1174 707 278 286 22 44 chr2 61638161 61638252 -189049602 + MER5B DNA MER1_type 89 177 -1 963 214 23 9 chr2 61638259 61638474 -189049380 - MER20 DNA MER1_type -1 218 1 428 237 10 10 chr2 61638517 61638614 -189049240 + MER5A DNA MER1_type 9 105 -84 953 195 16 0 chr2 61638679 61638864 -189048990 - MER58A DNA MER1_type 0 224 37 788 143 68 7 chr2 61642633 61642780 -189045074 - L1MA4 LINE L1 -25 6275 6120 1066 209 16 79 chr2 61643387 61643641 -189044213 - MER8 DNA MER2_type -1 238 1 25 0 0 0 chr2 61644024 61644049 -189043805 + AT_rich Low_complexity Low_complexity 1 25 0 520 113 0 0 chr2 61644201 61644281 -189043573 + AluSp/q SINE Alu 220 299 -14 21 0 0 0 chr2 61644924 61644945 -189042909 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr2 61647041 61647073 -189040781 + AT_rich Low_complexity Low_complexity 1 32 0 2195 102 0 0 chr2 61647875 61648168 -189039686 + AluSc SINE Alu 1 293 -16 27 0 0 0 chr2 61649054 61649081 -189038773 + AT_rich Low_complexity Low_complexity 1 27 0 14659 139 34 103 chr2 61649102 61652557 -189035297 + L1PA7 LINE L1 12 3227 -2919 42866 42 4 7 chr2 61652558 61658732 -189029122 + L1PA3 LINE L1 2 6154 -1 213 94 0 0 chr2 61658736 61658768 -189029086 + (A)n Simple_repeat Simple_repeat 1 32 0 14811 94 27 0 chr2 61658773 61661650 -189026204 + L1PA7 LINE L1 3230 6141 -13 183 42 0 0 chr2 61661653 61661677 -189026177 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2033 252 95 13 chr2 61661832 61662462 -189025392 + L1ME2 LINE L1 5468 6149 -15 21 36 0 0 chr2 61662737 61662765 -189025089 + AT_rich Low_complexity Low_complexity 1 28 0 27 62 0 0 chr2 61662868 61662916 -189024938 + AT_rich Low_complexity Low_complexity 1 48 0 544 205 90 19 chr2 61662991 61663147 -189024707 + Charlie4 DNA MER1_type 20 186 -1775 514 311 33 26 chr2 61663149 61663300 -189024554 - MER5B DNA MER1_type -25 153 2 314 278 173 31 chr2 61663782 61663973 -189023881 + MIR SINE MIR 2 219 -43 23 0 0 0 chr2 61664115 61664138 -189023716 + AT_rich Low_complexity Low_complexity 1 23 0 206 341 16 62 chr2 61664820 61664949 -189022905 + MIR3 SINE MIR 58 180 -28 434 308 120 17 chr2 61667319 61667618 -189020236 - LTR16C LTR ERVL -6 485 156 5743 59 3 1 chr2 61667791 61668522 -189019332 + L1PA6 LINE L1 5423 6154 0 2436 187 71 62 chr2 61668743 61669376 -189018478 - L1M4 LINE L1 -847 5299 4658 1877 147 10 10 chr2 61669376 61669683 -189018171 - AluJb SINE Alu -5 307 1 2436 187 71 62 chr2 61669683 61669786 -189018068 - L1M4 LINE L1 -1488 4658 4557 1228 214 81 48 chr2 61669787 61670221 -189017633 + L1ME1 LINE L1 5714 6161 -5 186 143 0 0 chr2 61670427 61670462 -189017392 + (TA)n Simple_repeat Simple_repeat 2 36 0 231 292 0 0 chr2 61671406 61671478 -189016376 + A-rich Low_complexity Low_complexity 1 72 0 320 240 115 21 chr2 61672878 61672974 -189014880 - MIR SINE MIR -156 106 2 656 236 86 86 chr2 61673348 61673776 -189014078 + HAL1 LINE L1 1987 2414 -93 398 256 136 11 chr2 61673883 61674059 -189013795 + L1ME4a LINE L1 4316 4513 -1633 204 390 9 19 chr2 61674808 61674913 -189012941 - MIR SINE MIR -82 126 23 491 264 101 37 chr2 61676739 61677087 -189010767 + L1ME4a LINE L1 5527 5896 -225 184 297 178 10 chr2 61677492 61677593 -189010261 - L2 LINE L2 -10 3303 3186 22 0 0 0 chr2 61677912 61677934 -189009920 + AT_rich Low_complexity Low_complexity 1 22 0 375 163 0 0 chr2 61678972 61679052 -189008802 + (TG)n Simple_repeat Simple_repeat 2 81 0 951 212 55 5 chr2 61679200 61679485 -189008369 - MER2 DNA MER2_type 0 345 1 2393 66 3 3 chr2 61679691 61679995 -189007859 + AluY SINE Alu 1 304 -7 27 49 0 0 chr2 61680380 61680421 -189007433 + AT_rich Low_complexity Low_complexity 1 41 0 366 305 58 32 chr2 61681217 61681371 -189006483 + MIR3 SINE MIR 44 201 -7 24 67 0 0 chr2 61681776 61681821 -189006033 + AT_rich Low_complexity Low_complexity 1 45 0 198 0 0 0 chr2 61683183 61683205 -189004649 + (A)n Simple_repeat Simple_repeat 1 22 0 26 50 0 0 chr2 61684001 61684041 -189003813 + AT_rich Low_complexity Low_complexity 1 40 0 319 247 147 20 chr2 61687229 61687379 -189000475 + HAL1 LINE L1 2283 2451 -56 403 268 77 53 chr2 61687952 61688161 -188999693 + MLT1J LTR MaLR 56 269 -242 546 234 127 0 chr2 61688220 61688378 -188999476 + MER3 DNA MER1_type 10 187 -22 466 206 68 62 chr2 61688386 61688532 -188999322 + MLT1J LTR MaLR 314 460 -51 1534 204 7 7 chr2 61688721 61689000 -188998854 + AluJo SINE Alu 2 280 -32 21 89 0 0 chr2 61689326 61689382 -188998472 + AT_rich Low_complexity Low_complexity 1 56 0 270 356 73 26 chr2 61689626 61689817 -188998037 + L2 LINE L2 2560 2759 -555 299 252 69 0 chr2 61690634 61690730 -188997124 - MIR SINE MIR -62 146 47 1386 161 125 42 chr2 61691104 61691440 -188996414 - THE1B LTR MaLR 0 364 1 11289 94 13 4 chr2 61691440 61693006 -188994848 - THE1B-int LTR MaLR 0 1580 1 2084 114 16 70 chr2 61693006 61693391 -188994463 - THE1B LTR MaLR 0 364 1 716 201 0 8 chr2 61694534 61694668 -188993186 + FLAM_C SINE Alu 1 133 0 230 300 60 10 chr2 61694993 61695093 -188992761 + MIR SINE MIR 144 248 -14 200 125 31 0 chr2 61695417 61695449 -188992405 + L2 LINE L2 3180 3212 -101 1424 129 114 16 chr2 61695474 61695607 -188992247 - AluJb SINE Alu -32 280 161 186 71 0 0 chr2 61695607 61695635 -188992219 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1424 129 114 16 chr2 61695635 61695756 -188992098 - AluJb SINE Alu -151 161 1 29 0 0 0 chr2 61697899 61697928 -188989926 + AT_rich Low_complexity Low_complexity 1 29 0 304 272 0 33 chr2 61698068 61698160 -188989694 + L1MC4 LINE L1 6614 6702 -1340 252 0 0 0 chr2 61698160 61698188 -188989666 + (CA)n Simple_repeat Simple_repeat 1 28 0 841 190 18 0 chr2 61698198 61698361 -188989493 - MLT1D LTR MaLR -46 459 294 1802 250 92 26 chr2 61698501 61699416 -188988438 + L1M4 LINE L1 2348 3322 -2824 5254 180 47 23 chr2 61699439 61700115 -188987739 + L1MC3 LINE L1 6181 6895 -890 306 0 0 0 chr2 61700115 61700149 -188987705 + (TA)n Simple_repeat Simple_repeat 2 35 0 5254 180 47 23 chr2 61700149 61700591 -188987263 + L1MC3 LINE L1 6895 7325 -460 2137 34 93 4 chr2 61701875 61702143 -188985711 + AluY SINE Alu 2 293 -18 25 0 0 0 chr2 61703258 61703283 -188984571 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 61703788 61703813 -188984041 + AT_rich Low_complexity Low_complexity 1 25 0 22 94 0 0 chr2 61703897 61703961 -188983893 + AT_rich Low_complexity Low_complexity 1 64 0 203 250 62 0 chr2 61704635 61704699 -188983155 + MIR SINE MIR 117 184 -78 27 29 0 0 chr2 61705212 61705246 -188982608 + AT_rich Low_complexity Low_complexity 1 34 0 1333 221 93 69 chr2 61705785 61706469 -188981385 + L1MC5 LINE L1 6558 7256 -728 546 207 47 120 chr2 61706595 61706895 -188980959 + L1MC5 LINE L1 7299 7576 -385 21 0 0 0 chr2 61706927 61706948 -188980906 + AT_rich Low_complexity Low_complexity 1 21 0 275 251 118 64 chr2 61706951 61707154 -188980700 + L1MC5 LINE L1 7694 7907 -54 3959 121 71 77 chr2 61708017 61708792 -188979062 - LTR1 LTR ERV1 -15 770 1 249 224 0 0 chr2 61708837 61708895 -188978959 + GA-rich Low_complexity Low_complexity 2 59 0 1010 221 42 5 chr2 61709398 61709611 -188978243 + MER58A DNA MER1_type 4 224 0 955 141 41 24 chr2 61711242 61711412 -188976442 - FRAM SINE Alu -5 171 1 380 362 143 2 chr2 61711954 61712484 -188975370 + L2 LINE L2 1943 2547 -767 21 0 0 0 chr2 61712766 61712787 -188975067 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 61713501 61713530 -188974324 + AT_rich Low_complexity Low_complexity 1 29 0 360 306 113 77 chr2 61715283 61715787 -188972067 + HAL1 LINE L1 1047 1568 -939 3102 264 72 48 chr2 61715787 61717290 -188970564 + L1MEc LINE L1 41 1579 -4817 2931 248 87 18 chr2 61717340 61718656 -188969198 + L1MEc LINE L1 2007 3365 -2850 1589 229 64 8 chr2 61718669 61719062 -188968792 + MLT1F1 LTR MaLR 9 423 -144 1291 62 84 0 chr2 61719034 61719212 -188968642 - MER30 DNA MER1_type -34 196 4 * 734 224 42 0 chr2 61719228 61719393 -188968461 + MLT1F LTR MaLR 371 542 0 665 239 4 2 chr2 61719398 61719575 -188968279 + L1MEc LINE L1 3375 3554 -2661 3243 205 126 38 chr2 61719866 61720852 -188967002 + L1MC4 LINE L1 6966 8038 -4 21 57 0 0 chr2 61721053 61721088 -188966766 + AT_rich Low_complexity Low_complexity 1 35 0 317 285 122 76 chr2 61721376 61721548 -188966306 + MIR SINE MIR 33 212 -50 393 162 40 14 chr2 61723276 61723350 -188964504 + MER5A DNA MER1_type 1 76 -113 985 263 94 38 chr2 61723355 61723822 -188964032 + MER39 LTR ERV1 1 707 0 582 230 0 0 chr2 61723822 61723935 -188963919 + MER5A DNA MER1_type 77 189 0 194 286 43 29 chr2 61724238 61724308 -188963546 + L2 LINE L2 3235 3305 -8 683 214 54 24 chr2 61724315 61724483 -188963371 - MLT1A1 LTR MaLR -12 353 181 29 78 0 0 chr2 61725307 61725371 -188962483 + AT_rich Low_complexity Low_complexity 1 64 0 252 306 50 25 chr2 61725714 61725835 -188962019 - L2 LINE L2 -1315 1999 1876 382 240 182 16 chr2 61726960 61727081 -188960773 + MER5A DNA MER1_type 5 145 -44 2248 117 0 0 chr2 61727102 61727411 -188960443 + AluSx SINE Alu 1 309 -3 233 162 191 15 chr2 61729405 61729473 -188958381 - L1ME1 LINE L1 -8 6158 6079 658 284 61 11 chr2 61729477 61729738 -188958116 - L1ME1 LINE L1 -2209 5599 5326 1887 162 0 7 chr2 61729807 61730115 -188957739 - AluJb SINE Alu -6 306 1 546 245 202 16 chr2 61731962 61732150 -188955704 + MLT1J2 LTR MaLR 5 227 -223 301 211 32 24 chr2 61732216 61732320 -188955534 + MLT1J1 LTR MaLR 343 446 -4 307 307 129 46 chr2 61732402 61732705 -188955149 + L1M2 LINE L1 1043 1370 -5479 21 0 0 0 chr2 61733610 61733631 -188954223 + AT_rich Low_complexity Low_complexity 1 21 0 410 180 137 50 chr2 61733661 61733822 -188954032 + Charlie2 DNA MER1_type 2688 2862 0 1738 190 6 3 chr2 61734193 61734504 -188953350 + AluJo SINE Alu 1 312 0 1912 141 3 3 chr2 61735032 61735330 -188952524 - AluJo SINE Alu -14 298 1 992 272 32 57 chr2 61735536 61735934 -188951920 + LTR16A LTR ERVL 14 401 -49 1836 181 3 3 chr2 61735934 61736244 -188951610 - AluJo SINE Alu -2 310 1 992 272 32 57 chr2 61736244 61736286 -188951568 + LTR16A LTR ERVL 401 443 -7 21 36 0 0 chr2 61736296 61736324 -188951530 + AT_rich Low_complexity Low_complexity 1 28 0 181 267 54 33 chr2 61736403 61736515 -188951339 - MIR SINE MIR -55 207 97 872 286 68 4 chr2 61736821 61737055 -188950799 - MIR SINE MIR -10 252 4 4156 163 25 12 chr2 61737196 61738012 -188949842 - L1MB8 LINE L1 0 6178 5353 2195 222 45 52 chr2 61738009 61738221 -188949633 - L1M4b LINE L1 -6287 572 360 * 2313 79 0 35 chr2 61738221 61738539 -188949315 + AluY SINE Alu 1 307 -4 2195 222 45 52 chr2 61738539 61738899 -188948955 - L1M4b LINE L1 -6499 360 4 645 269 94 26 chr2 61738923 61739157 -188948697 + MIR SINE MIR 13 262 0 2142 110 73 20 chr2 61739441 61739797 -188948057 + THE1C LTR MaLR 1 375 0 1205 171 14 5 chr2 61740081 61740298 -188947556 + MER20 DNA MER1_type 1 219 0 707 244 47 9 chr2 61740397 61740722 -188947132 - MLT1I LTR MaLR 0 409 4 25 0 0 0 chr2 61740806 61740831 -188947023 + AT_rich Low_complexity Low_complexity 1 25 0 412 268 8 77 chr2 61741148 61741394 -188946460 + L1MC5 LINE L1 7297 7525 -436 422 132 0 0 chr2 61741417 61741485 -188946369 - MSTD LTR MaLR -3 393 326 2048 119 24 0 chr2 61741487 61741782 -188946072 + AluSq SINE Alu 1 302 -11 596 315 28 0 chr2 61741782 61741960 -188945894 - MSTD LTR MaLR -213 183 1 987 225 9 9 chr2 61742169 61742387 -188945467 + MER20 DNA MER1_type 1 218 -1 192 284 123 12 chr2 61742400 61742481 -188945373 + L2 LINE L2 3195 3284 -29 186 316 40 0 chr2 61742574 61742650 -188945204 - L2 LINE L2 -1040 2274 2196 2286 144 41 3 chr2 61742652 61743040 -188944814 - MER57A LTR ERV1 0 403 1 348 306 28 9 chr2 61743062 61743170 -188944684 - MER5B DNA MER1_type 0 178 69 258 32 0 0 chr2 61743380 61743411 -188944443 + (T)n Simple_repeat Simple_repeat 1 31 0 14709 31 2 0 chr2 61743512 61746055 -188941799 + L1PA3 LINE L1 3625 6169 0 1041 330 35 26 chr2 61746273 61747074 -188940780 + ERVL LTR ERVL 1479 2329 -3435 385 328 72 35 chr2 61747137 61747512 -188940342 + ERVL LTR ERVL 2394 2782 -2703 402 309 93 22 chr2 61747634 61747912 -188939942 + ERVL LTR ERVL 2979 3276 -2378 1039 181 87 40 chr2 61747917 61748229 -188939625 + THE1B LTR MaLR 3 337 -38 1758 190 0 3 chr2 61748229 61748524 -188939330 - AluJb SINE Alu -18 294 1 1039 181 87 40 chr2 61748524 61748564 -188939290 + THE1B LTR MaLR 337 374 -1 375 322 81 41 chr2 61748742 61749171 -188938683 + ERVL LTR ERVL 3580 4081 -1444 194 264 47 66 chr2 61751243 61751349 -188936505 + L3 LINE CR1 1465 1568 -9 181 239 0 22 chr2 61751542 61751588 -188936266 + L2 LINE L2 1980 2024 -1290 28 0 0 0 chr2 61751588 61751616 -188936238 + AT_rich Low_complexity Low_complexity 1 28 0 282 391 53 0 chr2 61752061 61752212 -188935642 - L2 LINE L2 -661 2653 2495 1169 277 59 39 chr2 61752691 61753362 -188934492 + L2 LINE L2 2621 3309 -4 385 341 54 63 chr2 61754269 61754332 -188933522 - L2 LINE L2 0 3272 3210 1678 186 32 19 chr2 61754332 61754702 -188933152 + THE1C LTR MaLR 1 375 0 385 341 54 63 chr2 61754702 61754987 -188932867 - L2 LINE L2 -62 3210 2927 948 341 120 11 chr2 61755370 61755922 -188931932 - L2 LINE L2 -661 2653 2042 6329 63 0 3 chr2 61756319 61757101 -188930753 + LTR17 LTR ERV1 1 780 0 351 272 19 19 chr2 61757330 61757433 -188930421 - MER5A DNA MER1_type -83 106 4 1050 143 0 0 chr2 61758938 61759092 -188928762 + AluSg/x SINE Alu 137 290 -22 240 35 0 0 chr2 61759101 61759130 -188928724 + (GGGGA)n Simple_repeat Simple_repeat 5 33 0 240 35 0 0 chr2 61759662 61759691 -188928163 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 1901 141 14 14 chr2 61759696 61759986 -188927868 - AluSx SINE Alu -22 290 1 229 348 26 43 chr2 61760176 61760291 -188927563 + L3b LINE CR1 1390 1502 -81 348 330 0 0 chr2 61760872 61760969 -188926885 + L2 LINE L2 3176 3272 0 644 295 123 4 chr2 61761079 61761306 -188926548 - MIR SINE MIR -3 259 6 538 103 10 10 chr2 61761481 61761578 -188926276 + (GGAA)n Simple_repeat Simple_repeat 2 98 0 896 114 0 0 chr2 61761747 61761879 -188925975 + L1MA5A LINE L1 6156 6287 -10 28 61 0 0 chr2 61761997 61762046 -188925808 + AT_rich Low_complexity Low_complexity 1 49 0 1283 192 124 15 chr2 61763039 61763305 -188924549 + AluJb SINE Alu 5 299 -13 261 350 131 6 chr2 61763393 61763553 -188924301 + L2 LINE L2 2955 3134 -138 314 204 10 61 chr2 61763651 61763749 -188924105 + MER46C DNA MER2_type 161 253 -85 1108 158 21 0 chr2 61763760 61763950 -188923904 + MER2 DNA MER2_type 8 201 -144 303 197 91 0 chr2 61763995 61764061 -188923793 + MER2 DNA MER2_type 271 342 -3 1731 233 25 20 chr2 61764370 61764541 -188923313 - MER39 LTR ERV1 0 707 538 2578 116 0 11 chr2 61764541 61764919 -188922935 + THE1C LTR MaLR 2 375 0 1731 233 25 20 chr2 61764919 61765225 -188922629 - MER39 LTR ERV1 -169 538 67 573 332 56 46 chr2 61765608 61766090 -188921764 + L2 LINE L2 1890 2376 -938 278 318 65 65 chr2 61766105 61766481 -188921373 + L2 LINE L2 2667 3044 -228 2256 123 0 0 chr2 61766570 61766880 -188920974 - AluSx SINE Alu 0 312 3 2699 192 8 2 chr2 61767085 61767554 -188920300 - MER70A LTR ERVL 0 472 1 274 262 134 67 chr2 61767593 61767757 -188920097 - L1ME LINE L1 -531 5590 5416 425 304 39 42 chr2 61767810 61768168 -188919686 - HAL1 LINE L1 -1407 1100 744 27 0 0 0 chr2 61769027 61769054 -188918800 + AT_rich Low_complexity Low_complexity 1 27 0 1711 148 32 26 chr2 61769175 61769485 -188918369 + AluJb SINE Alu 1 312 0 361 320 40 22 chr2 61769614 61769842 -188918012 - L1ME LINE L1 -1164 4982 4751 2269 190 29 2 chr2 61769872 61770287 -188917567 - MSTB LTR MaLR 0 426 1 774 108 7 22 chr2 61770297 61770436 -188917418 + (TTTC)n Simple_repeat Simple_repeat 1 137 0 21 0 0 0 chr2 61771792 61771813 -188916041 + AT_rich Low_complexity Low_complexity 1 21 0 326 306 132 0 chr2 61771847 61771968 -188915886 + MIR3 SINE MIR 8 144 -64 289 290 68 49 chr2 61774153 61774315 -188913539 - MIR3 SINE MIR -32 176 6 1079 192 54 21 chr2 61776701 61776941 -188910913 - L1PA16 LINE L1 -14 6152 5905 201 74 0 0 chr2 61777310 61777337 -188910517 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 308 321 0 12 chr2 61780264 61780348 -188907506 - L2 LINE L2 -21 3251 3169 1509 335 63 23 chr2 61780451 61781195 -188906659 + L3 LINE CR1 803 1576 -1 24 32 0 0 chr2 61781773 61781804 -188906050 + AT_rich Low_complexity Low_complexity 1 31 0 4566 202 51 18 chr2 61781913 61783742 -188904112 - L1MB8 LINE L1 -9 6169 4168 466 235 229 12 chr2 61783877 61784043 -188903811 - MIR SINE MIR 0 262 61 230 336 95 9 chr2 61784124 61784267 -188903587 - MIR SINE MIR -63 145 38 2533 119 3 3 chr2 61785003 61785363 -188902491 + THE1B LTR MaLR 2 361 -3 10447 102 40 17 chr2 61785366 61786911 -188900943 + THE1B-int LTR MaLR 1 1580 0 2254 146 3 3 chr2 61786911 61787268 -188900586 + THE1B LTR MaLR 1 357 -7 241 242 22 0 chr2 61787270 61787361 -188900493 + (CATA)n Simple_repeat Simple_repeat 2 94 0 21 0 0 0 chr2 61787516 61787537 -188900317 + AT_rich Low_complexity Low_complexity 1 21 0 186 321 18 0 chr2 61790076 61790132 -188897722 + MIR3 SINE MIR 130 186 -22 252 0 0 0 chr2 61790605 61790633 -188897221 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 2320 188 127 9 chr2 61790828 61791460 -188896394 - LTR48 LTR ERV1 -37 750 45 706 160 17 8 chr2 61791464 61791583 -188896271 + FLAM_C SINE Alu 5 124 -19 235 179 0 54 chr2 61791584 61791640 -188896214 - LTR48 LTR ERV1 -733 54 2 1820 142 28 12 chr2 61791663 61791986 -188895868 + MER57A LTR ERV1 28 355 -48 1050 232 112 54 chr2 61792390 61792907 -188894947 + L1ME2 LINE L1 5608 6154 -10 4959 141 21 20 chr2 61792990 61793126 -188894728 - MER4D LTR ERV1 -5 898 764 2896 13 0 0 chr2 61793126 61793441 -188894413 + AluYb8 SINE Alu 1 315 -3 4959 141 21 20 chr2 61793441 61794201 -188893653 - MER4D LTR ERV1 -139 764 1 1511 137 19 41 chr2 61794204 61794276 -188893578 - MSTA LTR MaLR 0 428 356 2153 114 3 0 chr2 61794276 61794566 -188893288 + AluSx SINE Alu 1 291 -21 1511 137 19 41 chr2 61794566 61794763 -188893091 - MSTA LTR MaLR -72 356 165 * 1637 184 55 3 chr2 61794761 61795109 -188892745 - MER65C LTR ERV1 -95 366 1 2464 83 136 8 chr2 61795112 61795509 -188892345 + LTR7 LTR ERV1 1 448 -2 6812 106 56 9 chr2 61795511 61796663 -188891191 + HERVH LTR ERV1 1 1206 -6507 8801 94 6 16 chr2 61796683 61798050 -188889804 + HERVH LTR ERV1 1635 2987 -4726 786 138 41 0 chr2 61798044 61798189 -188889665 + HERVH LTR ERV1 3140 3290 -4423 * 3252 102 6 2 chr2 61798179 61798679 -188889175 + HERVH LTR ERV1 3492 3993 -3720 4141 142 0 1 chr2 61798681 61799344 -188888510 + HERVH LTR ERV1 4488 5149 -2564 1291 124 18 9 chr2 61799345 61799563 -188888291 + HERVH LTR ERV1 5600 5819 -1894 2209 103 48 13 chr2 61799563 61799940 -188887914 + HERVH LTR ERV1 7324 7713 0 2478 77 148 5 chr2 61799940 61800332 -188887522 + LTR7 LTR ERV1 1 448 -2 2380 99 0 0 chr2 61801037 61801340 -188886514 - AluSc SINE Alu -6 303 1 21 0 0 0 chr2 61801881 61801902 -188885952 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 61801955 61801981 -188885873 + AT_rich Low_complexity Low_complexity 1 26 0 197 284 95 0 chr2 61802676 61802750 -188885104 + MIR SINE MIR 67 147 -115 332 316 25 19 chr2 61803093 61803251 -188884603 - MLT1L LTR MaLR -314 301 143 1794 168 0 0 chr2 61803495 61803775 -188884079 + AluJb SINE Alu 15 294 -18 286 191 0 24 chr2 61804950 61805034 -188882820 + (TA)n Simple_repeat Simple_repeat 2 83 0 22 0 0 0 chr2 61805470 61805492 -188882362 + AT_rich Low_complexity Low_complexity 1 22 0 356 40 20 0 chr2 61805557 61805607 -188882247 + (TA)n Simple_repeat Simple_repeat 1 51 0 1943 97 4 0 chr2 61805608 61805866 -188881988 - AluSc SINE Alu -16 293 35 201 74 0 0 chr2 61805992 61806019 -188881835 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 281 260 30 20 chr2 61806192 61806292 -188881562 + L1ME1 LINE L1 5972 6072 -94 * 30793 55 2 1 chr2 61806285 61810348 -188877506 + L1PA4 LINE L1 2 4067 -2079 9025 34 0 0 chr2 61810348 61812234 -188875620 + L1PA4 LINE L1 4286 6171 0 592 203 0 0 chr2 61812236 61812354 -188875500 + L1MB7 LINE L1 6058 6175 -9 22 0 0 0 chr2 61812704 61812726 -188875128 + AT_rich Low_complexity Low_complexity 1 22 0 196 308 39 51 chr2 61812931 61813009 -188874845 - MIR SINE MIR -176 86 10 256 293 128 30 chr2 61814000 61814133 -188873721 + MIR3 SINE MIR 1 146 -62 1657 213 3 0 chr2 61814139 61814435 -188873419 + AluJo SINE Alu 1 297 -15 23 0 0 0 chr2 61814435 61814458 -188873396 + AT_rich Low_complexity Low_complexity 1 23 0 253 263 0 0 chr2 61815948 61816005 -188871849 + L2 LINE L2 3257 3313 0 1023 221 3 53 chr2 61816223 61816526 -188871328 - L1MA10 LINE L1 -1 6333 6046 560 324 36 83 chr2 61816652 61817100 -188870754 - L2 LINE L2 -7 3265 2839 293 302 52 10 chr2 61817120 61817312 -188870542 - L1ME LINE L1 -278 5843 5644 586 322 21 8 chr2 61817321 61817560 -188870294 - MLT1L LTR MaLR -11 604 363 315 241 88 7 chr2 61818144 61818281 -188869573 - L1MC4a LINE L1 -1929 5879 5732 25 75 0 0 chr2 61818347 61818400 -188869454 + AT_rich Low_complexity Low_complexity 1 53 0 196 302 144 36 chr2 61820116 61820255 -188867599 - L2 LINE L2 -10 3303 3150 10362 195 69 15 chr2 61821232 61824179 -188863675 + L1MA4A LINE L1 4 3256 -3953 670 219 109 0 chr2 61824179 61824316 -188863538 + FRAM SINE Alu 1 147 -29 3545 207 27 6 chr2 61824346 61825197 -188862657 + L1MA4A LINE L1 3239 4107 -3101 557 246 15 15 chr2 61825198 61825332 -188862522 + AluJo SINE Alu 1 134 -178 1939 198 65 0 chr2 61825344 61825482 -188862372 + L1MA4A LINE L1 4094 4222 -2986 189 0 0 0 chr2 61825482 61825503 -188862351 + (CA)n Simple_repeat Simple_repeat 2 22 0 1939 198 65 0 chr2 61825503 61825890 -188861964 + L1MA4A LINE L1 4222 4653 -2555 21 57 0 0 chr2 61825890 61825925 -188861929 + AT_rich Low_complexity Low_complexity 1 35 0 1852 148 50 0 chr2 61825925 61826222 -188861632 + AluJb SINE Alu 1 312 0 366 173 38 83 chr2 61826234 61826274 -188861580 - MER33 DNA MER1_type -2409 176 136 1876 199 0 0 chr2 61826274 61826581 -188861273 + AluJb SINE Alu 1 307 -5 366 173 38 83 chr2 61826581 61826673 -188861181 - MER33 DNA MER1_type -2449 136 50 659 155 9 35 chr2 61826692 61826808 -188861046 - FLAM_C SINE Alu -16 127 15 314 231 0 0 chr2 61826818 61826883 -188860971 - MER3 DNA MER1_type -109 100 36 303 214 56 87 chr2 61827012 61827138 -188860716 + MIR SINE MIR 141 262 0 8653 169 10 6 chr2 61827320 61830043 -188857811 + L1MA4A LINE L1 4619 7353 -12 1231 156 18 18 chr2 61830685 61830903 -188856951 - MER20 DNA MER1_type -1 218 1 717 153 172 12 chr2 61831408 61831571 -188856283 - MER5A DNA MER1_type 0 189 1 1387 105 150 20 chr2 61832015 61832262 -188855592 + AluSg SINE Alu 16 294 -16 199 329 25 13 chr2 61832264 61832343 -188855511 - MIR SINE MIR -136 126 47 800 245 16 5 chr2 61833007 61833191 -188854663 - MER5A DNA MER1_type 0 189 4 219 290 267 8 chr2 61833392 61833523 -188854331 + MIR3 SINE MIR 23 187 -21 190 204 204 0 chr2 61833754 61833808 -188854046 + MIR SINE MIR 78 142 -66 23 33 0 0 chr2 61834373 61834403 -188853451 + AT_rich Low_complexity Low_complexity 1 30 0 24 67 0 0 chr2 61835477 61835522 -188852332 + AT_rich Low_complexity Low_complexity 1 45 0 992 213 38 0 chr2 61837203 61837414 -188850440 - MER20 DNA MER1_type 0 219 1 1684 153 50 6 chr2 61837433 61837753 -188850101 - L1MA10 LINE L1 -3 6331 5998 520 335 17 11 chr2 61841039 61841215 -188846639 + MIR3 SINE MIR 16 192 -16 225 222 0 0 chr2 61841695 61841740 -188846114 - MIR SINE MIR -63 145 101 703 201 0 88 chr2 61841747 61841941 -188845913 - MLT1K LTR MaLR -38 550 374 21 0 0 0 chr2 61842601 61842622 -188845232 + AT_rich Low_complexity Low_complexity 1 21 0 1260 224 56 18 chr2 61842712 61843051 -188844803 - MLT1C LTR MaLR 0 467 116 811 198 12 6 chr2 61843050 61843217 -188844637 - MLT1C LTR MaLR -299 168 1 * 258 302 42 41 chr2 61843423 61843573 -188844281 - MIR SINE MIR -65 197 53 199 343 131 17 chr2 61843740 61843915 -188843939 + L2 LINE L2 2223 2417 -897 313 127 42 28 chr2 61844378 61844449 -188843405 + L1MC2 LINE L1 6258 6329 -15 2134 129 0 7 chr2 61844449 61844752 -188843102 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr2 61844807 61844830 -188843024 + AT_rich Low_complexity Low_complexity 1 23 0 252 250 197 23 chr2 61846286 61846418 -188841436 + L2 LINE L2 1943 2097 -1217 843 259 81 41 chr2 61846511 61846862 -188840992 + L1MA9 LINE L1 5867 6237 -75 183 80 0 0 chr2 61846862 61846887 -188840967 + (TA)n Simple_repeat Simple_repeat 2 26 0 843 259 81 41 chr2 61846887 61846928 -188840926 + L1MA9 LINE L1 6237 6275 -37 296 182 11 0 chr2 61847046 61847134 -188840720 + (TA)n Simple_repeat Simple_repeat 2 90 0 1200 247 23 73 chr2 61847145 61847530 -188840324 - MLT1A2 LTR MaLR -8 366 1 268 220 35 180 chr2 61847547 61847892 -188839962 - L2 LINE L2 -65 3248 2954 463 369 74 15 chr2 61847952 61848342 -188839512 + L2 LINE L2 2300 2712 -602 4037 221 17 25 chr2 61848353 61849805 -188838049 + L1MB8 LINE L1 4750 6177 -1 225 267 171 0 chr2 61849811 61849916 -188837938 + L1ME2 LINE L1 6032 6154 -10 376 285 21 35 chr2 61849930 61850074 -188837780 + L1MC5 LINE L1 7774 7915 -46 357 287 113 42 chr2 61850132 61850560 -188837294 + L2 LINE L2 2777 3280 -33 595 245 172 7 chr2 61851332 61851483 -188836371 - MER5A DNA MER1_type -3 186 11 213 322 154 14 chr2 61851547 61851690 -188836164 - L3b LINE CR1 -21 1562 1400 745 81 81 0 chr2 61852588 61852699 -188835155 + L1PA6 LINE L1 6035 6154 0 260 189 14 0 chr2 61852779 61852853 -188835001 + (CA)n Simple_repeat Simple_repeat 2 76 0 1141 257 54 43 chr2 61853077 61853836 -188834018 - L1MC5 LINE L1 -35 7926 7261 526 206 47 158 chr2 61853872 61854378 -188833476 - L1MC5 LINE L1 -753 7208 6759 1226 169 71 1 chr2 61854391 61854772 -188833082 - LOR1b LTR ERV1 0 461 1 1472 188 36 64 chr2 61854915 61855276 -188832578 - MLT1B LTR MaLR -39 351 1 308 309 57 57 chr2 61855293 61855539 -188832315 - L1MC4a LINE L1 -1149 6659 6414 1794 146 14 14 chr2 61855763 61856058 -188831796 - AluJb SINE Alu -11 301 7 370 253 157 28 chr2 61856081 61856259 -188831595 - L1MC4a LINE L1 -1636 6172 5972 1943 210 33 18 chr2 61856700 61857152 -188830702 - MLT1C LTR MaLR -8 459 1 2115 298 143 27 chr2 61857209 61858298 -188829556 - L2 LINE L2 -732 2582 1367 25 31 0 0 chr2 61858999 61859031 -188828823 + AT_rich Low_complexity Low_complexity 1 32 0 285 109 0 0 chr2 61859088 61859134 -188828720 + (TG)n Simple_repeat Simple_repeat 1 46 0 347 294 81 22 chr2 61859599 61859735 -188828119 - MIR SINE MIR -32 230 87 885 158 92 53 chr2 61859837 61860085 -188827769 - MLT2B1 LTR ERVL -1 519 189 1007 229 69 5 chr2 61860085 61860303 -188827551 + Tigger7 DNA MER2_type 2 233 -500 328 211 126 11 chr2 61860305 61860400 -188827454 + Tigger7 DNA MER2_type 2382 2487 0 943 189 17 0 chr2 61860408 61860588 -188827266 - MLT2B1 LTR ERVL -337 183 1 693 316 62 78 chr2 61860633 61861120 -188826734 + L2 LINE L2 2835 3313 0 266 349 47 8 chr2 61861169 61861298 -188826556 + L2 LINE L2 2680 2813 -501 207 69 0 0 chr2 61862267 61862296 -188825558 + (TGGA)n Simple_repeat Simple_repeat 2 30 0 42613 34 23 1 chr2 61862486 61868510 -188819344 - L1PA2 LINE L1 -3 6152 1 816 249 12 12 chr2 61868881 61869054 -188818800 + MLT1F LTR MaLR 4 176 -366 4037 291 76 30 chr2 61869085 61870757 -188817097 + MERVL-F LTR ERVL 3592 5339 -146 417 194 93 78 chr2 61870810 61870939 -188816915 - MER58C DNA MER1_type -6 209 79 359 269 39 0 chr2 61871015 61871093 -188816761 - MER58C DNA MER1_type -133 82 2 624 256 37 58 chr2 61871098 61871289 -188816565 + MERVL-F LTR ERVL 5570 5756 -8 956 222 114 26 chr2 61871289 61871779 -188816075 + MLT2F LTR ERVL 3 622 -41 798 284 120 29 chr2 61872919 61873312 -188814542 - L1ME3A LINE L1 -195 6044 5688 336 102 0 0 chr2 61873312 61873361 -188814493 + (TA)n Simple_repeat Simple_repeat 2 50 0 798 284 120 29 chr2 61873361 61873865 -188813989 - L1ME3A LINE L1 -551 5688 5062 494 286 84 35 chr2 61873968 61874195 -188813659 + MLT1J2 LTR MaLR 173 410 -40 2465 60 0 3 chr2 61874240 61874540 -188813314 - AluY SINE Alu -12 299 1 738 312 60 11 chr2 61874542 61874988 -188812866 - L1ME3A LINE L1 -1155 5060 4593 1815 203 54 42 chr2 61875071 61875568 -188812286 + MLT1D LTR MaLR 1 503 -2 2043 118 132 16 chr2 61875673 61876053 -188811801 + MSTA LTR MaLR 5 428 0 227 278 109 26 chr2 61876139 61876441 -188811413 - L1ME3A LINE L1 -4747 1649 1323 1926 168 0 3 chr2 61876709 61877012 -188810842 - AluJo SINE Alu -9 303 2 310 271 53 52 chr2 61878716 61879164 -188808690 + L1MEc LINE L1 1012 1522 -5008 825 267 18 27 chr2 61879385 61879610 -188808244 - MER58A DNA MER1_type 0 224 2 267 319 62 12 chr2 61879613 61879912 -188807942 + L1MEc LINE L1 1839 2142 -866 5048 238 43 40 chr2 61880406 61880507 -188807347 + L1MC3 LINE L1 3086 3185 -2961 1733 121 40 57 chr2 61880507 61880804 -188807050 - AluJo SINE Alu -20 292 1 5048 238 43 40 chr2 61880804 61882492 -188805362 + L1MC3 LINE L1 3185 4880 -1266 1664 209 21 91 chr2 61882492 61883022 -188804832 - MLT1D LTR MaLR 0 505 13 333 68 0 0 chr2 61883035 61883079 -188804775 + (T)n Simple_repeat Simple_repeat 1 44 0 7077 203 24 30 chr2 61883082 61885066 -188802788 + L1MC3 LINE L1 4869 5398 -748 710 149 0 0 chr2 61885055 61885176 -188802678 + L1MC3 LINE L1 7663 7783 -2 * 694 261 86 30 chr2 61885152 61885534 -188802320 + L1MEc LINE L1 2398 2800 -3740 * 225 258 30 0 chr2 61885550 61885616 -188802238 + MIR3 SINE MIR 132 199 -9 194 336 96 24 chr2 61887217 61887342 -188800512 - L2 LINE L2 -1 3271 3138 889 169 12 42 chr2 61887439 61887605 -188800249 - AluJb SINE Alu -6 306 146 2071 121 3 0 chr2 61888120 61888402 -188799452 + AluSq SINE Alu 1 283 -30 3751 129 11 11 chr2 61888980 61889600 -188798254 + L1MC1 LINE L1 5714 6333 0 3963 127 42 82 chr2 61889789 61890616 -188797238 - L1PB4 LINE L1 0 6156 5363 325 319 141 18 chr2 61891603 61891766 -188796088 - MIR3 SINE MIR -9 199 17 13976 127 23 60 chr2 61891866 61892497 -188795357 + Tigger1 DNA MER2_type 1 654 -1764 1909 140 11 0 chr2 61892497 61892776 -188795078 + AluSx SINE Alu 1 282 -30 13976 127 23 60 chr2 61892776 61894359 -188793495 + Tigger1 DNA MER2_type 654 2295 -123 890 209 0 0 chr2 61894359 61894522 -188793332 + FRAM SINE Alu 1 163 -3 13976 127 23 60 chr2 61894522 61894707 -188793147 + Tigger1 DNA MER2_type 2295 2305 -113 2278 94 0 3 chr2 61894707 61895006 -188792848 - AluSp SINE Alu -15 298 1 13976 127 23 60 chr2 61895006 61895114 -188792740 + Tigger1 DNA MER2_type 2305 2416 -2 21 57 0 0 chr2 61896001 61896036 -188791818 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 61896284 61896306 -188791548 + AT_rich Low_complexity Low_complexity 1 22 0 182 345 0 0 chr2 61896484 61896542 -188791312 - L2 LINE L2 0 3272 3215 221 311 216 0 chr2 61896989 61897063 -188790791 + L2 LINE L2 3163 3252 -20 314 288 81 16 chr2 61897093 61897215 -188790639 - MIR SINE MIR -65 143 28 1898 238 60 71 chr2 61897660 61898197 -188789657 - MLT1F LTR MaLR -9 533 3 2461 44 0 3 chr2 61899289 61899583 -188788271 - AluY SINE Alu -18 293 1 674 229 6 0 chr2 61899677 61899856 -188787998 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 792 221 147 0 chr2 61900532 61900736 -188787118 - MIR SINE MIR -27 235 2 442 294 104 38 chr2 61900973 61901428 -188786426 + LTR33A LTR ERVL 2 523 0 257 220 60 12 chr2 61901595 61901763 -188786091 + (TA)n Simple_repeat Simple_repeat 2 177 0 353 110 49 0 chr2 61902071 61902153 -188785701 + GA-rich Low_complexity Low_complexity 3 88 0 21 57 0 0 chr2 61902426 61902461 -188785393 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr2 61902960 61902995 -188784859 + AT_rich Low_complexity Low_complexity 1 35 0 188 303 15 15 chr2 61904795 61904861 -188782993 - MIR SINE MIR -118 90 25 2111 108 0 7 chr2 61905225 61905504 -188782350 + AluSx SINE Alu 4 280 -32 258 32 0 0 chr2 61905766 61905797 -188782057 + (TG)n Simple_repeat Simple_repeat 2 32 0 197 275 0 29 chr2 61906096 61906165 -188781689 - MIR SINE MIR -191 71 5 340 262 137 42 chr2 61906406 61906655 -188781199 - MLT1H LTR MaLR 0 549 230 251 111 111 0 chr2 61907108 61907153 -188780701 + L1PA11 LINE L1 6125 6174 0 2398 76 7 0 chr2 61907474 61907777 -188780077 + AluSp SINE Alu 1 305 -8 213 304 22 11 chr2 61909160 61909252 -188778602 + GA-rich Low_complexity Low_complexity 3 95 0 336 315 95 42 chr2 61909322 61909563 -188778291 + L1M2 LINE L1 829 1082 -5767 270 0 0 0 chr2 61909602 61909632 -188778222 + (CTG)n Simple_repeat Simple_repeat 3 32 0 203 253 0 58 chr2 61909924 61910011 -188777843 + C-rich Low_complexity Low_complexity 4 85 0 30 0 0 0 chr2 61914271 61914301 -188773553 + AT_rich Low_complexity Low_complexity 1 30 0 191 35 0 35 chr2 61914301 61914330 -188773524 + (TATAA)n Simple_repeat Simple_repeat 1 28 0 2186 199 28 30 chr2 61914928 61915421 -188772433 - MLT1D LTR MaLR -8 497 6 929 293 109 42 chr2 61915491 61915942 -188771912 - LTR16C LTR ERVL -9 482 2 588 196 83 15 chr2 61917662 61917795 -188770059 - MER5B DNA MER1_type -34 144 3 216 271 133 96 chr2 61917829 61918017 -188769837 - MIR3 SINE MIR 0 208 14 * 466 259 224 0 chr2 61918013 61918156 -188769698 + MER5A DNA MER1_type 9 183 -6 256 250 0 0 chr2 61918203 61918251 -188769603 + L2 LINE L2 3188 3235 -37 2371 87 3 10 chr2 61918999 61919308 -188768546 - AluSx SINE Alu -5 307 1 1382 160 95 0 chr2 61919488 61919782 -188768072 + MER33 DNA MER1_type 3 324 0 21 0 0 0 chr2 61920005 61920026 -188767828 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr2 61920952 61920976 -188766878 + (TTTAG)n Simple_repeat Simple_repeat 3 26 0 339 228 47 128 chr2 61921994 61922058 -188765796 + MIR3 SINE MIR 66 134 -74 180 0 0 0 chr2 61922058 61922078 -188765776 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1737 161 33 4 chr2 61922080 61922354 -188765500 - AluSx SINE Alu -30 282 1 339 228 47 128 chr2 61922354 61922435 -188765419 + MIR3 SINE MIR 135 202 -6 21 0 0 0 chr2 61922880 61922901 -188764953 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr2 61924818 61924843 -188763011 + (TA)n Simple_repeat Simple_repeat 1 25 0 592 246 139 21 chr2 61925685 61925872 -188761982 - MER63A DNA MER1_type -1 209 1 953 221 67 0 chr2 61927560 61927800 -188760054 + MER112 DNA MER1_type 1 256 0 27 0 0 0 chr2 61927972 61927999 -188759855 + AT_rich Low_complexity Low_complexity 1 27 0 25 51 0 0 chr2 61928375 61928414 -188759440 + AT_rich Low_complexity Low_complexity 1 39 0 195 335 62 50 chr2 61928802 61929160 -188758694 + L2 LINE L2 2383 2744 -570 186 336 48 0 chr2 61929141 61929245 -188758609 + L2 LINE L2 2950 3058 -214 * 1066 268 102 22 chr2 61930663 61931371 -188756483 + L2 LINE L2 2541 3312 -1 1042 272 184 53 chr2 61932265 61932960 -188754894 + L2 LINE L2 1796 2581 -733 245 159 68 0 chr2 61933094 61933138 -188754716 + L2 LINE L2 3267 3313 0 23 0 0 0 chr2 61933268 61933291 -188754563 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 61934514 61934542 -188753312 + AT_rich Low_complexity Low_complexity 1 28 0 2537 55 13 0 chr2 61934768 61935075 -188752779 - AluY SINE Alu 0 311 1 2375 93 3 0 chr2 61935515 61935817 -188752037 + AluSx SINE Alu 1 303 -9 4374 267 95 18 chr2 61936604 61938063 -188749791 - L2 LINE L2 0 3313 1701 794 216 96 45 chr2 61938063 61938262 -188749592 + MER63A DNA MER1_type 2 210 0 4374 267 95 18 chr2 61938262 61938503 -188749351 - L2 LINE L2 -1612 1701 1480 230 349 0 0 chr2 61939041 61939124 -188748730 - L2 LINE L2 0 3313 3231 2365 68 0 40 chr2 61939322 61939644 -188748210 - AluY SINE Alu -2 309 1 283 307 79 0 chr2 61940199 61940300 -188747554 - MIR SINE MIR -108 154 46 27 0 0 0 chr2 61940484 61940511 -188747343 + AT_rich Low_complexity Low_complexity 1 27 0 261 0 0 0 chr2 61940806 61940835 -188747019 + (CAA)n Simple_repeat Simple_repeat 2 30 0 335 322 0 12 chr2 61941762 61941933 -188745921 + CT-rich Low_complexity Low_complexity 1 169 0 29 28 0 0 chr2 61944200 61944236 -188743618 + AT_rich Low_complexity Low_complexity 1 36 0 3259 129 3 44 chr2 61944248 61944430 -188743424 - L1PB1 LINE L1 -17 6134 5946 2080 118 7 3 chr2 61944430 61944726 -188743128 - AluSx SINE Alu -15 297 1 3259 129 3 44 chr2 61944726 61944906 -188742948 - L1PB1 LINE L1 -205 5946 5801 312 27 0 0 chr2 61944906 61944943 -188742911 + (TG)n Simple_repeat Simple_repeat 2 38 0 3259 129 3 44 chr2 61944943 61945143 -188742711 - L1PB1 LINE L1 -350 5801 5594 26 30 0 0 chr2 61945367 61945400 -188742454 + AT_rich Low_complexity Low_complexity 1 33 0 26 50 0 0 chr2 61945651 61945691 -188742163 + AT_rich Low_complexity Low_complexity 1 40 0 310 221 0 156 chr2 61946241 61946363 -188741491 - L1MC4 LINE L1 -1326 6716 6614 181 306 0 0 chr2 61946703 61946739 -188741115 + MIR SINE MIR 32 67 -141 2011 122 35 3 chr2 61947143 61947429 -188740425 - AluSx SINE Alu -17 295 1 198 258 0 0 chr2 61947824 61947886 -188739968 + (TA)n Simple_repeat Simple_repeat 1 62 0 289 307 99 25 chr2 61951374 61951576 -188736278 + MIR SINE MIR 20 236 -26 2444 83 0 3 chr2 61952547 61952859 -188734995 + AluSq SINE Alu 1 311 -2 23 0 0 0 chr2 61953111 61953134 -188734720 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 61953409 61953432 -188734422 + AT_rich Low_complexity Low_complexity 1 23 0 244 163 0 0 chr2 61953726 61953769 -188734085 - HAL1b LINE L1 -559 789 747 385 289 58 50 chr2 61953967 61954018 -188733836 - HAL1 LINE L1 -1426 1081 1032 261 0 0 0 chr2 61954018 61954047 -188733807 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 385 289 58 50 chr2 61954047 61954237 -188733617 - HAL1 LINE L1 -1475 1032 838 193 349 62 27 chr2 61954967 61955113 -188732741 - L2 LINE L2 -595 2719 2569 2076 119 24 3 chr2 61955372 61955667 -188732187 - AluSx SINE Alu -11 301 1 203 167 0 0 chr2 61955802 61955838 -188732016 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 229 388 20 0 chr2 61956844 61956942 -188730912 - MIR SINE MIR -74 134 35 195 406 10 0 chr2 61957198 61957294 -188730560 - MIR3 SINE MIR -10 198 102 328 252 75 11 chr2 61957587 61957728 -188730126 + MER5A DNA MER1_type 11 178 0 483 205 41 8 chr2 61958546 61958668 -188729186 - MER69A DNA AcHobo -1 176 51 717 207 83 0 chr2 61958855 61959000 -188728854 + FRAM SINE Alu 1 156 -20 2054 120 0 0 chr2 61959027 61959356 -188728498 + AluSx SINE Alu 1 329 0 228 287 0 0 chr2 61961061 61961162 -188726692 + (TA)n Simple_repeat Simple_repeat 1 101 0 603 287 56 5 chr2 61961376 61961571 -188726283 + MIR SINE MIR 57 261 -1 2434 159 36 7 chr2 61962271 61962685 -188725169 - MSTB LTR MaLR 0 426 1 792 183 0 0 chr2 61962736 61962867 -188724987 - FLAM_A SINE Alu -2 131 1 354 377 88 36 chr2 61962895 61963624 -188724230 + L2 LINE L2 1963 2729 -585 2142 136 0 0 chr2 61963725 61964027 -188723827 - AluSx SINE Alu -10 302 1 470 284 195 9 chr2 61964114 61964329 -188723525 + MIR SINE MIR 8 262 0 21 0 0 0 chr2 61965500 61965521 -188722333 + AT_rich Low_complexity Low_complexity 1 21 0 653 241 126 29 chr2 61965652 61965859 -188721995 - MIR SINE MIR -17 245 19 1720 188 38 70 chr2 61966597 61967097 -188720757 - MER31A LTR ERV1 -1 484 1 301 341 32 8 chr2 61967515 61967641 -188720213 - MIR3 SINE MIR -74 134 6 1640 209 60 13 chr2 61967946 61968425 -188719429 - LTR27 LTR ERV1 0 501 26 25 0 0 0 chr2 61970583 61970608 -188717246 + AT_rich Low_complexity Low_complexity 1 25 0 2653 90 16 8 chr2 61970631 61970998 -188716856 + THE1C LTR MaLR 1 370 -5 2061 123 25 0 chr2 61971049 61971334 -188716520 + AluSx SINE Alu 1 292 -20 1227 290 114 11 chr2 61971377 61972034 -188715820 + L2 LINE L2 2476 3181 -132 222 246 16 111 chr2 61972076 61972202 -188715652 + L2 LINE L2 3180 3293 -20 303 285 96 50 chr2 61972410 61972691 -188715163 - L1M4 LINE L1 -1366 4780 4487 2284 111 0 0 chr2 61972717 61973023 -188714831 + AluSx SINE Alu 1 306 -6 1520 182 0 58 chr2 61973766 61973914 -188713940 + AluJo SINE Alu 1 124 -188 1909 90 48 0 chr2 61973914 61974216 -188713638 + AluSg SINE Alu 1 315 0 1520 182 0 58 chr2 61974216 61974379 -188713475 + AluJo SINE Alu 124 295 -17 26 50 0 0 chr2 61975723 61975763 -188712091 + AT_rich Low_complexity Low_complexity 1 40 0 31 44 0 0 chr2 61977772 61977817 -188710037 + AT_rich Low_complexity Low_complexity 1 45 0 345 298 119 74 chr2 61978210 61978629 -188709225 + L2 LINE L2 2835 3272 0 253 307 11 0 chr2 61979318 61979406 -188708448 + CT-rich Low_complexity Low_complexity 2 90 0 2369 78 0 7 chr2 61979594 61979902 -188707952 + AluSp SINE Alu 1 306 -7 2055 124 17 0 chr2 61980390 61980680 -188707174 + AluSx SINE Alu 1 295 -17 1703 235 101 46 chr2 61981006 61981746 -188706108 - MER20B DNA MER1_type -1 783 3 1139 319 77 0 chr2 61982159 61982563 -188705291 - LTR16A LTR ERVL 0 450 16 2066 138 7 0 chr2 61983701 61984005 -188703849 + AluJb SINE Alu 1 306 -6 226 224 0 26 chr2 62035654 62035730 -188652124 + C-rich Low_complexity Low_complexity 3 76 0 9793 123 7 8 chr2 62035830 62037491 -188650363 + L1P LINE L1 1553 3210 -2936 390 291 0 0 chr2 62037539 62037656 -188650198 + C-rich Low_complexity Low_complexity 1 117 0 287 350 0 0 chr2 62037756 62037859 -188649995 + CT-rich Low_complexity Low_complexity 3 105 0 349 265 12 30 chr2 62037941 62038107 -188649747 + CT-rich Low_complexity Low_complexity 3 165 0 314 364 71 18 chr2 62038208 62038433 -188649421 + L3 LINE CR1 1118 1354 -223 2029 125 30 0 chr2 62038439 62038734 -188649120 - AluSx SINE Alu -8 304 1 271 111 0 0 chr2 62038808 62038853 -188649001 - Charlie1b DNA MER1_type -76 447 403 * 2490 127 3 8 chr2 62038839 62039225 -188648629 + MER4E LTR ERV1 368 751 -28 1437 201 67 13 chr2 62039230 62039511 -188648343 - Charlie1b DNA MER1_type -2350 411 102 1537 105 9 0 chr2 62039511 62039721 -188648133 + AluY SINE Alu 91 302 -9 1437 201 67 13 chr2 62039721 62039827 -188648027 - Charlie1b DNA MER1_type -2659 102 3 205 300 71 57 chr2 62039829 62039969 -188647885 + L3 LINE CR1 1361 1502 -75 511 285 173 22 chr2 62040101 62040378 -188647476 - L3 LINE CR1 -13 1564 1246 21 0 0 0 chr2 62042580 62042601 -188645253 + AT_rich Low_complexity Low_complexity 1 21 0 230 313 61 30 chr2 62044384 62044515 -188643339 + L2 LINE L2 3175 3309 -4 253 136 0 34 chr2 62044616 62044675 -188643179 + (CAA)n Simple_repeat Simple_repeat 1 57 0 185 327 18 0 chr2 62044701 62044756 -188643098 + L2 LINE L2 3250 3305 -8 2786 135 34 13 chr2 62045411 62045936 -188641918 - L1MA9 LINE L1 0 6312 5777 300 154 0 0 chr2 62045945 62045997 -188641857 + (TA)n Simple_repeat Simple_repeat 2 53 0 320 221 15 15 chr2 62046054 62046185 -188641669 + (TA)n Simple_repeat Simple_repeat 1 131 0 317 186 12 58 chr2 62046187 62046273 -188641581 - L1MA9 LINE L1 -522 5790 5709 27 0 0 0 chr2 62046408 62046435 -188641419 + AT_rich Low_complexity Low_complexity 1 27 0 1673 160 0 56 chr2 62046436 62046742 -188641112 - AluJo SINE Alu -23 289 1 1160 181 19 162 chr2 62046819 62047239 -188640615 - MLT1A1 LTR MaLR -2 363 4 1835 229 35 0 chr2 62047245 62047669 -188640185 - MLT1A1-int LTR MaLR -3 1732 1294 285 260 0 42 chr2 62047780 62047876 -188639978 - MLT1A1-int LTR MaLR -964 771 680 255 246 0 0 chr2 62047934 62047995 -188639859 - MLT1A2-int LTR MaLR -487 884 824 2471 212 52 47 chr2 62048023 62048678 -188639176 - MLT1A2-int LTR MaLR -1075 660 3 1404 206 12 107 chr2 62048680 62049093 -188638761 - MLT1A2 LTR MaLR 0 374 1 236 317 38 17 chr2 62049566 62049691 -188638163 + MIR SINE MIR 23 146 -62 536 126 42 21 chr2 62050632 62050775 -188637079 + CT-rich Low_complexity Low_complexity 2 147 0 1935 172 22 69 chr2 62051564 62051971 -188635883 + MLT1B LTR MaLR 3 390 0 274 239 28 0 chr2 62052413 62052484 -188635370 - MIR SINE MIR -14 248 176 24 0 0 0 chr2 62054056 62054080 -188633774 + AT_rich Low_complexity Low_complexity 1 24 0 501 293 61 15 chr2 62055564 62055762 -188632092 - MIR SINE MIR -5 257 51 2022 140 0 7 chr2 62056692 62056992 -188630862 + AluSx SINE Alu 1 298 -14 2099 116 10 20 chr2 62058485 62058772 -188629082 + AluSg SINE Alu 1 286 -24 186 43 0 0 chr2 62058772 62058795 -188629059 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 188 185 241 0 chr2 62059178 62059232 -188628622 - L2 LINE L2 -5 3308 3242 947 252 19 0 chr2 62059272 62059486 -188628368 + MER58A DNA MER1_type 1 218 -6 378 61 0 0 chr2 62060267 62060316 -188627538 + (TG)n Simple_repeat Simple_repeat 2 50 0 2695 19 0 16 chr2 62061125 62061441 -188626413 + AluYa5 SINE Alu 1 311 0 307 303 21 21 chr2 62062015 62062157 -188625697 + MER99 DNA DNA 686 827 -1 1502 171 38 40 chr2 62062330 62062827 -188625027 + pTR5 LTR ERV1 741 1236 -1202 331 47 0 0 chr2 62062825 62062868 -188624986 + pTR5 LTR ERV1 350 392 -2046 * 509 293 5 42 chr2 62063170 62063382 -188624472 - MER63A DNA MER1_type -6 204 1 225 139 0 0 chr2 62065884 62065920 -188621934 - MER117 DNA MER1_type -107 90 55 9828 95 18 5 chr2 62066533 62068714 -188619140 + L1PA7 LINE L1 3951 6152 -2 182 163 41 0 chr2 62070076 62070125 -188617729 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 243 125 0 0 chr2 62072210 62072250 -188615604 + (T)n Simple_repeat Simple_repeat 1 40 0 196 53 53 26 chr2 62075376 62075414 -188612440 + A-rich Low_complexity Low_complexity 2 40 0 246 320 80 35 chr2 62076252 62076452 -188611402 - MIR SINE MIR -35 227 19 288 267 21 0 chr2 62076474 62076668 -188611186 + GA-rich Low_complexity Low_complexity 1 198 0 208 356 0 23 chr2 62076914 62077001 -188610853 + MIR SINE MIR 31 115 -147 848 190 25 6 chr2 62077362 62077525 -188610329 - FRAM SINE Alu 0 166 1 299 285 62 27 chr2 62077560 62077693 -188610161 - MIR SINE MIR -65 143 43 359 354 85 0 chr2 62078556 62078720 -188609134 - MIR SINE MIR -71 191 14 1136 240 26 62 chr2 62079933 62080321 -188607533 - MLT1A2 LTR MaLR 0 374 1 713 28 97 3 chr2 62081616 62081947 -188605907 + (TA)n Simple_repeat Simple_repeat 1 361 0 40 0 0 0 chr2 62081947 62081987 -188605867 + AT_rich Low_complexity Low_complexity 1 40 0 620 212 0 29 chr2 62082365 62082502 -188605352 - MER58B DNA MER1_type -5 336 204 31574 45 3 0 chr2 62082620 62088756 -188599098 - L1PA4 LINE L1 -1 6154 4 34 42 0 0 chr2 62090540 62090588 -188597266 + AT_rich Low_complexity Low_complexity 1 48 0 799 252 8 43 chr2 62090603 62090837 -188597017 - MLT1D LTR MaLR 0 505 280 381 102 0 0 chr2 62090882 62090941 -188596913 + (TC)n Simple_repeat Simple_repeat 2 60 0 595 210 51 40 chr2 62090975 62091151 -188596703 - MLT1D LTR MaLR -327 178 1 1986 166 0 3 chr2 62091432 62091734 -188596120 - AluSx SINE Alu -11 301 1 355 308 89 14 chr2 62091734 62091875 -188595979 + MIR SINE MIR 22 173 -89 700 190 104 0 chr2 62092181 62092344 -188595510 + MER104 DNA MER2_type 1 180 0 446 316 69 11 chr2 62092515 62092689 -188595165 + MIR SINE MIR 2 185 -77 1050 254 93 55 chr2 62093038 62093510 -188594344 - MLT1E2 LTR MaLR 0 626 137 215 216 0 0 chr2 62093538 62093575 -188594279 + L2 LINE L2 3261 3297 -16 25 0 0 0 chr2 62093630 62093655 -188594199 + AT_rich Low_complexity Low_complexity 1 25 0 1720 162 170 16 chr2 62093664 62094035 -188593819 - MSTA LTR MaLR 0 428 1 6476 135 175 47 chr2 62094035 62095434 -188592420 - MSTA-int LTR MaLR 0 1580 3 1710 141 176 19 chr2 62095436 62095806 -188592048 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr2 62095897 62095921 -188591933 + AT_rich Low_complexity Low_complexity 1 24 0 241 240 0 0 chr2 62095945 62095995 -188591859 + (TG)n Simple_repeat Simple_repeat 1 50 0 307 286 53 96 chr2 62096096 62096367 -188591487 - L1MC/D LINE L1 -537 5796 5538 504 90 26 0 chr2 62096367 62096445 -188591409 + MADE1 DNA Mariner 1 80 0 307 286 53 96 chr2 62096445 62096474 -188591380 - L1MC/D LINE L1 -795 5538 5509 1831 146 47 65 chr2 62096474 62096822 -188591032 - MLT2A2 LTR ERVL 0 554 212 2280 81 7 7 chr2 62096822 62097117 -188590737 - AluY SINE Alu -16 295 1 1831 146 47 65 chr2 62097117 62097326 -188590528 - MLT2A2 LTR ERVL -342 212 1 22 35 0 0 chr2 62097698 62097727 -188590127 + AT_rich Low_complexity Low_complexity 1 29 0 1943 188 5 11 chr2 62098846 62099213 -188588641 + MLT1A1 LTR MaLR 1 365 0 949 232 0 5 chr2 62099744 62099942 -188587912 - MER58A DNA MER1_type 0 224 28 191 292 0 0 chr2 62100069 62100117 -188587737 - L2 LINE L2 -9 3263 3216 1736 157 53 58 chr2 62100498 62100874 -188586980 - MLT1A2 LTR MaLR 0 374 1 1056 229 108 104 chr2 62101540 62102077 -188585777 + MLT1H LTR MaLR 11 549 0 221 393 62 0 chr2 62103622 62103767 -188584087 + MIR SINE MIR 1 154 -108 368 181 0 0 chr2 62103769 62103841 -188584013 + MER116 DNA Mariner 9 80 0 908 227 56 9 chr2 62104663 62104983 -188582871 + MSTD LTR MaLR 11 392 -4 341 333 0 7 chr2 62105361 62105502 -188582352 + MARNA DNA Mariner 367 506 -80 21 0 0 0 chr2 62105653 62105674 -188582180 + AT_rich Low_complexity Low_complexity 1 21 0 570 304 92 13 chr2 62106618 62106845 -188581009 + MIR SINE MIR 16 260 -2 241 173 27 27 chr2 62107563 62107638 -188580216 + (CAAA)n Simple_repeat Simple_repeat 2 76 0 22 0 0 0 chr2 62108179 62108201 -188579653 + AT_rich Low_complexity Low_complexity 1 22 0 2475 158 17 5 chr2 62108957 62109376 -188578478 + MSTB LTR MaLR 3 426 0 520 316 71 71 chr2 62109811 62110235 -188577619 + MER115 DNA AcHobo 210 633 -60 2300 117 43 6 chr2 62110452 62110803 -188577051 - THE1B LTR MaLR 0 364 1 2071 146 0 9 chr2 62111164 62111516 -188576338 - AluJb SINE Alu 0 349 1 198 132 57 0 chr2 62112517 62112570 -188575284 + (TA)n Simple_repeat Simple_repeat 2 57 0 497 303 106 0 chr2 62112827 62113015 -188574839 + MIR SINE MIR 52 259 -3 236 273 182 28 chr2 62113087 62113230 -188574624 + MIR SINE MIR 49 213 -49 456 294 59 44 chr2 62116098 62116302 -188571552 + MIR SINE MIR 7 213 -49 1819 171 70 8 chr2 62116597 62116953 -188570901 + MSTB LTR MaLR 1 378 -48 206 229 21 0 chr2 62116981 62117029 -188570825 + MIR SINE MIR 195 243 -19 574 88 77 18 chr2 62117102 62117272 -188570582 + (TA)n Simple_repeat Simple_repeat 1 180 0 701 279 62 0 chr2 62117701 62117909 -188569945 - MIR SINE MIR -2 260 40 1013 217 9 5 chr2 62117927 62118144 -188569710 + MER20 DNA MER1_type 1 218 -1 258 56 0 0 chr2 62118728 62118764 -188569090 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 23520 53 18 6 chr2 62118765 62122636 -188565218 - L1PA5 LINE L1 -11 6143 2235 1917 85 8 4 chr2 62123141 62123411 -188564443 - AluY SINE Alu 0 305 35 188 345 185 8 chr2 62123981 62124100 -188563754 + L2 LINE L2 3129 3268 -4 192 206 127 16 chr2 62124150 62124213 -188563641 + MIR SINE MIR 72 141 -121 482 310 68 40 chr2 62124272 62124727 -188563127 + L1ME2 LINE L1 92 559 -5837 2597 268 81 24 chr2 62124739 62125130 -188562724 + L1ME2 LINE L1 3352 3719 -2496 227 0 0 83 chr2 62125130 62125166 -188562688 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2597 268 81 24 chr2 62125166 62125619 -188562235 + L1ME2 LINE L1 3719 4145 -2070 204 97 0 0 chr2 62125619 62125650 -188562204 + (CA)n Simple_repeat Simple_repeat 2 32 0 2597 268 81 24 chr2 62125650 62126165 -188561689 + L1ME2 LINE L1 4145 4790 -1425 1242 212 38 68 chr2 62126178 62126546 -188561308 - MLT1A2 LTR MaLR -17 357 1 2785 225 35 48 chr2 62126546 62127058 -188560796 + L1ME2 LINE L1 4786 5303 -930 2260 111 0 22 chr2 62127058 62127374 -188560480 - AluSx SINE Alu -3 309 1 2785 225 35 48 chr2 62127374 62128300 -188559554 + L1ME2 LINE L1 5303 6208 -25 2208 122 0 0 chr2 62130625 62130936 -188556918 + AluSx SINE Alu 1 311 -1 2195 96 3 0 chr2 62130941 62131223 -188556631 + AluSp SINE Alu 1 283 -30 186 43 0 0 chr2 62131231 62131254 -188556600 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 234 0 0 0 chr2 62132157 62132183 -188555671 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 263 226 16 0 chr2 62132194 62132287 -188555567 + (TA)n Simple_repeat Simple_repeat 1 94 0 197 139 23 0 chr2 62132288 62132331 -188555523 + GA-rich Low_complexity Low_complexity 1 44 0 25 0 0 0 chr2 62132487 62132512 -188555342 + AT_rich Low_complexity Low_complexity 1 25 0 344 254 264 35 chr2 62132877 62133078 -188554776 - MLT1J2 LTR MaLR -138 312 66 2030 125 7 0 chr2 62133082 62133363 -188554491 + AluSx SINE Alu 1 283 -29 186 161 0 0 chr2 62135293 62135324 -188552530 + L2 LINE L2 3209 3239 -33 21 0 0 0 chr2 62135367 62135388 -188552466 + AT_rich Low_complexity Low_complexity 1 21 0 313 213 19 0 chr2 62135388 62135496 -188552358 + (TA)n Simple_repeat Simple_repeat 2 111 0 3131 198 119 9 chr2 62135820 62136626 -188551228 - L1MD3 LINE L1 0 7995 5447 2156 108 0 23 chr2 62136711 62137016 -188550838 - AluSq SINE Alu -15 298 1 1447 265 75 2 chr2 62137795 62137852 -188550002 + MLT1F1 LTR MaLR 111 162 -405 475 91 11 11 chr2 62137852 62137940 -188549914 + (TCTA)n Simple_repeat Simple_repeat 4 91 0 1447 265 75 2 chr2 62137940 62138308 -188549546 + MLT1F1 LTR MaLR 162 567 0 259 19 77 19 chr2 62142104 62142156 -188545698 + (TA)n Simple_repeat Simple_repeat 2 56 0 759 50 36 61 chr2 62142158 62142422 -188545432 + (TATAA)n Simple_repeat Simple_repeat 1 257 0 406 365 11 28 chr2 62142462 62142643 -188545211 - MIR SINE MIR -82 180 3 * 591 298 39 5 chr2 62142643 62142839 -188545015 + MIR SINE MIR 60 262 0 2322 191 14 9 chr2 62143076 62143521 -188544333 - MLT2B2 LTR ERVL -48 467 21 444 191 0 0 chr2 62143526 62143641 -188544213 - L1MCa LINE L1 -2940 3600 3486 3804 187 20 57 chr2 62143662 62144288 -188543566 - L1MCa LINE L1 -5502 1038 456 1252 164 26 30 chr2 62144288 62144328 -188543526 - L1MB1 LINE L1 -5 6163 6124 3664 152 61 21 chr2 62144328 62145034 -188542820 + MER50 LTR ERV1 1 734 0 1252 164 26 30 chr2 62145034 62145262 -188542592 - L1MB1 LINE L1 -44 6124 5896 3804 187 20 57 chr2 62145262 62145564 -188542290 - L1MCa LINE L1 -6084 456 144 288 274 206 0 chr2 62145617 62145719 -188542135 - MIR3 SINE MIR -45 163 41 1347 268 66 28 chr2 62147018 62147519 -188540335 + LTR33 LTR ERVL 1 520 -1 21 36 0 0 chr2 62147566 62147594 -188540260 + AT_rich Low_complexity Low_complexity 1 28 0 184 375 34 11 chr2 62148404 62148492 -188539362 + MIR SINE MIR 51 140 -68 244 268 34 7 chr2 62149252 62149339 -188538515 + CT-rich Low_complexity Low_complexity 3 153 0 356 300 100 29 chr2 62149563 62149905 -188537949 - L1MEc LINE L1 -3684 2856 2529 234 0 0 0 chr2 62150378 62150404 -188537450 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 333 0 0 0 chr2 62150403 62150440 -188537414 + (GA)n Simple_repeat Simple_repeat 2 38 0 298 269 61 61 chr2 62150455 62150652 -188537202 - L1MEc LINE L1 -854 2047 1802 259 213 38 38 chr2 62151139 62151219 -188536635 + (TGAA)n Simple_repeat Simple_repeat 3 82 0 2071 115 0 7 chr2 62151247 62151534 -188536320 - AluSg SINE Alu -21 289 5 459 291 118 34 chr2 62152769 62153006 -188534848 - MIR SINE MIR 0 262 6 264 149 0 0 chr2 62153718 62153765 -188534089 + (GGGA)n Simple_repeat Simple_repeat 4 50 0 689 116 17 39 chr2 62153765 62153946 -188533908 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 537 122 30 51 chr2 62153948 62154292 -188533562 + GA-rich Low_complexity Low_complexity 1 336 0 180 0 0 0 chr2 62154292 62154312 -188533542 + (CAAG)n Simple_repeat Simple_repeat 2 21 0 1865 257 57 55 chr2 62155078 62155767 -188532087 + L1ME LINE L1 6 684 -5396 2146 119 7 3 chr2 62155767 62156077 -188531777 - AluSq SINE Alu -2 311 1 1865 257 57 55 chr2 62156077 62156657 -188531197 + L1ME LINE L1 684 1261 -4819 530 345 16 0 chr2 62156667 62156858 -188530996 + MLT1J LTR MaLR 68 261 -250 730 214 85 119 chr2 62156986 62157364 -188530490 - MLT1A1 LTR MaLR 0 365 1 219 88 0 0 chr2 62157735 62157769 -188530085 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 7743 22 0 0 chr2 62157778 62159029 -188528825 - L1PA3 LINE L1 -1 6154 4905 2351 236 31 54 chr2 62160243 62160985 -188526869 + MER21B LTR ERV1 13 737 -126 1661 196 113 19 chr2 62162307 62162734 -188525120 + MLT1C LTR MaLR 1 374 0 277 364 33 0 chr2 62162856 62162977 -188524877 - MIR SINE MIR -73 189 65 230 371 42 48 chr2 62163137 62163304 -188524550 - MIR3 SINE MIR -27 181 16 27 62 0 0 chr2 62164260 62164308 -188523546 + AT_rich Low_complexity Low_complexity 1 48 0 270 0 0 0 chr2 62164621 62164651 -188523203 + (TG)n Simple_repeat Simple_repeat 1 30 0 364 343 16 59 chr2 62165273 62165529 -188522325 + MIR3 SINE MIR 8 252 -10 273 29 0 0 chr2 62165641 62165675 -188522179 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 237 132 0 0 chr2 62166493 62166531 -188521323 + (TCC)n Simple_repeat Simple_repeat 3 40 0 21 0 0 0 chr2 62167799 62167820 -188520034 + AT_rich Low_complexity Low_complexity 1 21 0 1738 182 0 3 chr2 62167820 62168111 -188519743 - AluJb SINE Alu -18 294 5 3773 179 33 61 chr2 62168363 62168529 -188519325 + LTR13 LTR ERVK 1 170 -784 2113 84 7 7 chr2 62168529 62168826 -188519028 - AluY SINE Alu -14 297 1 3773 179 33 61 chr2 62168826 62169641 -188518213 + LTR13 LTR ERVK 170 954 0 8704 103 6 16 chr2 62169641 62171005 -188516849 + HERVK13 LTR ERVK 1 1350 -6766 196 75 25 25 chr2 62171930 62171970 -188515884 + (TA)n Simple_repeat Simple_repeat 2 41 0 280 253 52 23 chr2 62172829 62172991 -188514863 - MLT1J LTR MaLR -344 167 6 500 242 25 0 chr2 62173099 62173219 -188514635 + MER94 DNA DNA 3 125 -9 545 320 0 12 chr2 62173663 62173835 -188514019 - MLT1I LTR MaLR -200 209 40 1154 216 9 0 chr2 62173855 62174077 -188513777 - MER58A DNA MER1_type 0 224 1 1353 176 54 32 chr2 62174128 62174407 -188513447 + AluJb SINE Alu 2 286 -26 1981 194 17 3 chr2 62174566 62174926 -188512928 - MLT1A1 LTR MaLR 0 365 1 333 0 0 0 chr2 62175375 62175412 -188512442 + (CA)n Simple_repeat Simple_repeat 2 38 0 231 36 0 0 chr2 62175411 62175439 -188512415 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 468 0 0 0 chr2 62177016 62177068 -188510786 + (TG)n Simple_repeat Simple_repeat 1 52 0 212 271 188 60 chr2 62178387 62178520 -188509334 + MIR3 SINE MIR 14 163 -45 279 0 0 0 chr2 62180087 62180118 -188507736 + (CACCC)n Simple_repeat Simple_repeat 3 33 0 554 93 12 0 chr2 62180964 62181050 -188506804 + (GA)n Simple_repeat Simple_repeat 2 88 0 249 345 18 9 chr2 62181156 62181266 -188506588 - MIR SINE MIR -48 214 104 565 214 46 122 chr2 62181272 62181510 -188506344 + MER58A DNA MER1_type 5 224 0 398 287 30 0 chr2 62181906 62182007 -188505847 - MER5A DNA MER1_type -77 112 9 273 243 50 26 chr2 62182157 62182279 -188505575 + MER5A DNA MER1_type 1 189 0 203 296 170 37 chr2 62183504 62183639 -188504215 + MER5B DNA MER1_type 14 166 -12 488 268 141 45 chr2 62183656 62183685 -188504169 + MIR SINE MIR 16 41 -221 4227 175 15 33 chr2 62183685 62184567 -188503287 - L1MA10 LINE L1 -1 6333 5468 488 268 141 45 chr2 62184567 62184757 -188503097 + MIR SINE MIR 41 256 -6 741 202 191 0 chr2 62186449 62186637 -188501217 - MER58A DNA MER1_type 0 224 1 296 261 96 17 chr2 62186645 62186760 -188501094 + MER5C DNA MER1_type 1 124 -200 21 36 0 0 chr2 62188086 62188114 -188499740 + AT_rich Low_complexity Low_complexity 1 28 0 241 308 22 22 chr2 62188178 62188269 -188499585 + L3b LINE CR1 1144 1234 -349 1726 53 0 5 chr2 62188822 62189028 -188498826 + AluY SINE Alu 30 234 -77 197 33 33 0 chr2 62189037 62189067 -188498787 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 366 80 0 0 chr2 62190600 62190650 -188497204 + (TG)n Simple_repeat Simple_repeat 1 50 0 559 328 13 26 chr2 62191738 62191967 -188495887 - MIR SINE MIR -21 241 16 281 285 51 29 chr2 62193090 62193227 -188494627 - MIR SINE MIR -4 258 119 24 32 0 0 chr2 62193347 62193378 -188494476 + AT_rich Low_complexity Low_complexity 1 31 0 396 254 42 106 chr2 62193499 62193688 -188494166 + MLT1J LTR MaLR 1 177 -334 255 198 148 0 chr2 62193899 62193980 -188493874 + MIR SINE MIR 170 262 0 2696 112 0 3 chr2 62194026 62194402 -188493452 + THE1C LTR MaLR 1 375 0 9465 126 45 20 chr2 62194402 62195944 -188491910 + THE1C-int LTR MaLR 1 1580 0 2530 106 13 24 chr2 62195944 62196322 -188491532 + THE1C LTR MaLR 1 374 -1 472 271 26 26 chr2 62196461 62196612 -188491242 + MER103 DNA DNA 3 153 -13 359 271 37 28 chr2 62197150 62197257 -188490597 - MLT1I LTR MaLR -253 156 49 323 303 83 38 chr2 62197287 62197419 -188490435 - MIR SINE MIR -89 173 36 2385 85 10 0 chr2 62199224 62199530 -188488324 + AluY SINE Alu 1 309 -2 233 281 16 0 chr2 62200439 62200503 -188487351 + MER20B DNA MER1_type 18 82 -701 669 213 76 134 chr2 62200573 62200916 -188486938 + MER20B DNA MER1_type 215 537 -246 251 175 0 35 chr2 62200934 62200991 -188486863 + MER20B DNA MER1_type 729 783 0 21 0 0 0 chr2 62200996 62201017 -188486837 + AT_rich Low_complexity Low_complexity 1 21 0 289 351 108 14 chr2 62202098 62202246 -188485608 + L2 LINE L2 3074 3235 -37 1713 178 0 31 chr2 62202870 62203191 -188484663 + AluJo SINE Alu 1 311 -1 236 171 0 0 chr2 62204477 62204518 -188483336 - L1ME4a LINE L1 -73 6048 6008 237 304 43 43 chr2 62205326 62205418 -188482436 + MIR SINE MIR 152 243 -19 22 35 0 0 chr2 62205428 62205457 -188482397 + AT_rich Low_complexity Low_complexity 1 29 0 191 114 29 0 chr2 62205751 62205786 -188482068 + (TAG)n Simple_repeat Simple_repeat 1 36 0 489 250 80 75 chr2 62205816 62205958 -188481896 - MIR SINE MIR -30 232 92 2122 169 2 54 chr2 62205958 62206187 -188481667 - MLT1B LTR MaLR 0 390 151 198 0 0 0 chr2 62206187 62206209 -188481645 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2022 136 3 0 chr2 62206211 62206498 -188481356 - AluSx SINE Alu -24 288 1 2122 169 2 54 chr2 62206498 62206674 -188481180 - MLT1B LTR MaLR -240 150 3 489 250 80 75 chr2 62206674 62206743 -188481111 - MIR SINE MIR -170 92 20 1297 249 66 33 chr2 62206752 62207954 -188479900 - L1MD3 LINE L1 -12 7983 6684 300 53 0 0 chr2 62207968 62208006 -188479848 + (TCTA)n Simple_repeat Simple_repeat 3 40 0 899 166 14 0 chr2 62208494 62208639 -188479215 + MER58B DNA MER1_type 195 341 0 934 226 36 77 chr2 62210248 62210584 -188477270 - MER46C DNA MER2_type -14 324 3 954 208 66 8 chr2 62210589 62210817 -188477037 - MER58A DNA MER1_type 0 224 1 1972 133 77 11 chr2 62211511 62211863 -188475991 - THE1C LTR MaLR 0 375 1 374 276 35 9 chr2 62214452 62214568 -188473286 + MIR SINE MIR 63 181 -81 459 0 0 0 chr2 62214828 62214879 -188472975 + (CA)n Simple_repeat Simple_repeat 2 52 0 2490 78 0 0 chr2 62215532 62215841 -188472013 + AluY SINE Alu 3 311 0 22 0 0 0 chr2 62215979 62216001 -188471853 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 62216292 62216321 -188471533 + AT_rich Low_complexity Low_complexity 1 29 0 347 375 57 10 chr2 62217434 62217626 -188470228 + L3 LINE CR1 189 389 -1188 2868 148 22 43 chr2 62217636 62218195 -188469659 - MER41B LTR ERV1 -12 597 89 583 355 30 36 chr2 62218314 62218649 -188469205 + L3 LINE CR1 449 781 -796 278 258 16 0 chr2 62219183 62219245 -188468609 + L2 LINE L2 3250 3312 -1 417 327 75 23 chr2 62219557 62219771 -188468083 - MIR SINE MIR 0 262 38 775 280 35 4 chr2 62219788 62220020 -188467834 + MIR SINE MIR 21 259 -3 391 118 26 0 chr2 62222195 62222271 -188465583 + GA-rich Low_complexity Low_complexity 1 78 0 1132 95 0 11 chr2 62222276 62222455 -188465399 + (GGAA)n Simple_repeat Simple_repeat 4 180 0 376 191 0 0 chr2 62223137 62223205 -188464649 - Charlie1 DNA MER1_type -21 2740 2673 938 232 70 113 chr2 62223240 62223727 -188464127 - Charlie1 DNA MER1_type -2295 466 1 239 284 147 11 chr2 62223741 62223836 -188464018 + MIR SINE MIR 45 152 -110 1248 216 61 3 chr2 62224340 62224637 -188463217 + L1MC4 LINE L1 6862 7175 -867 335 127 14 28 chr2 62224755 62224826 -188463028 + L1MC4 LINE L1 7973 8042 0 1785 180 23 31 chr2 62225449 62225838 -188462016 - MLT1B LTR MaLR -4 386 1 460 312 44 5 chr2 62226962 62227167 -188460687 + LTR16A LTR ERVL 1 213 -237 195 100 0 0 chr2 62229185 62229215 -188458639 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 400 269 237 26 chr2 62229335 62229677 -188458177 + MLT1H LTR MaLR 26 439 -110 468 259 88 29 chr2 62230267 62230437 -188457417 + MIR SINE MIR 71 250 -12 1704 212 58 29 chr2 62231391 62231840 -188456014 - MLT1C LTR MaLR 0 467 6 236 296 11 34 chr2 62232528 62232616 -188455238 + MIR SINE MIR 124 209 -53 299 286 117 19 chr2 62232744 62232898 -188454956 - MIR SINE MIR -8 254 86 306 50 0 0 chr2 62233022 62233062 -188454792 + (CA)n Simple_repeat Simple_repeat 1 40 0 25 0 0 0 chr2 62233115 62233140 -188454714 + AT_rich Low_complexity Low_complexity 1 25 0 256 225 14 28 chr2 62233609 62233680 -188454174 + Charlie7 DNA MER1_type 2543 2612 0 23 68 0 0 chr2 62234084 62234128 -188453726 + AT_rich Low_complexity Low_complexity 1 44 0 188 327 37 19 chr2 62236200 62236307 -188451547 - MIR SINE MIR -73 135 27 974 206 0 6 chr2 62237452 62237632 -188450222 - MER5A DNA MER1_type -10 179 1 27 49 0 0 chr2 62238446 62238487 -188449367 + AT_rich Low_complexity Low_complexity 1 41 0 21 36 0 0 chr2 62238658 62238686 -188449168 + AT_rich Low_complexity Low_complexity 1 28 0 949 268 22 12 chr2 62238694 62238943 -188448911 - MIR SINE MIR -10 252 1 383 247 90 90 chr2 62239098 62239276 -188448578 + Charlie8 DNA MER1_type 1 111 -2306 312 333 21 0 chr2 62239775 62239868 -188447986 + L2 LINE L2 3162 3256 -16 292 162 15 15 chr2 62239903 62239971 -188447883 + GA-rich Low_complexity Low_complexity 3 70 0 205 339 133 18 chr2 62240180 62240345 -188447509 + MER5A DNA MER1_type 3 186 -3 2023 137 0 34 chr2 62240738 62241059 -188446795 + AluSx SINE Alu 1 310 -2 553 268 182 14 chr2 62241248 62241468 -188446386 + L2 LINE L2 2537 2793 -521 1045 292 9 68 chr2 62241471 62241896 -188445958 + MLT1I LTR MaLR 9 408 -1 724 284 200 21 chr2 62241897 62242348 -188445506 + L2 LINE L2 2784 3313 0 250 111 37 0 chr2 62244681 62244735 -188443119 - L1MC4 LINE L1 -1339 6703 6648 703 266 39 39 chr2 62247385 62247618 -188440236 + MIR SINE MIR 28 260 -2 209 161 0 0 chr2 62247619 62247650 -188440204 + (ATG)n Simple_repeat Simple_repeat 2 32 0 2079 118 0 3 chr2 62247763 62248051 -188439803 + AluSx SINE Alu 1 287 -25 243 0 0 0 chr2 62248054 62248081 -188439773 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 205 288 51 0 chr2 62248101 62248160 -188439694 + MIR SINE MIR 56 117 -145 234 264 179 38 chr2 62250540 62250646 -188437208 - MER5A DNA MER1_type -29 160 40 35 0 0 0 chr2 62251622 62251657 -188436197 + AT_rich Low_complexity Low_complexity 1 35 0 5264 96 4 1 chr2 62253531 62254269 -188433585 + L1PB1 LINE L1 5408 6147 -4 1636 211 12 6 chr2 62254353 62254690 -188433164 + MER58B DNA MER1_type 2 340 -1 23 0 0 0 chr2 62255250 62255273 -188432581 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 62255877 62255898 -188431956 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 62256781 62256802 -188431052 + AT_rich Low_complexity Low_complexity 1 21 0 254 325 12 12 chr2 62256861 62256941 -188430913 - L2 LINE L2 -8 3305 3226 28004 35 1 0 chr2 62257280 62261481 -188426373 + L1PA4 LINE L1 1948 6152 -3 25 31 0 0 chr2 62261481 62261513 -188426341 + AT_rich Low_complexity Low_complexity 1 32 0 241 251 14 43 chr2 62261526 62261604 -188426250 + MIR SINE MIR 37 104 -104 585 0 0 0 chr2 62263179 62263244 -188424610 + (TC)n Simple_repeat Simple_repeat 2 66 0 214 147 0 0 chr2 62263782 62263816 -188424038 + (TG)n Simple_repeat Simple_repeat 1 34 0 241 226 75 0 chr2 62264209 62264262 -188423592 + L2 LINE L2 3256 3312 -1 216 234 0 0 chr2 62264354 62264401 -188423453 - MIR SINE MIR -71 191 145 45 98 0 0 chr2 62264406 62264549 -188423305 + AT_rich Low_complexity Low_complexity 1 143 0 274 264 83 50 chr2 62265037 62265158 -188422696 - L2 LINE L2 -606 2708 2584 546 301 85 15 chr2 62265176 62265448 -188422406 + MLT1L LTR MaLR 1 291 -324 1844 168 0 0 chr2 62267157 62267466 -188420388 - AluSx SINE Alu 0 309 1 235 367 56 15 chr2 62267572 62267768 -188420086 + MIR SINE MIR 48 251 -11 261 319 0 37 chr2 62268169 62268338 -188419516 - MLT1L LTR MaLR -125 490 248 294 309 0 0 chr2 62268653 62268737 -188419117 + MIR SINE MIR 74 157 -105 237 286 0 13 chr2 62268809 62268886 -188418968 + MIR SINE MIR 81 156 -106 425 286 0 0 chr2 62270433 62270545 -188417309 + L2 LINE L2 2448 2559 -755 795 290 17 4 chr2 62270918 62271156 -188416698 - MIR SINE MIR -5 257 17 1896 136 29 16 chr2 62271636 62271944 -188415910 + AluSx SINE Alu 1 312 0 479 342 75 22 chr2 62272262 62272490 -188415364 - MIR SINE MIR -2 260 21 216 0 0 0 chr2 62272574 62272598 -188415256 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 225 0 0 0 chr2 62273371 62273396 -188414458 + (T)n Simple_repeat Simple_repeat 1 25 0 264 30 0 0 chr2 62273598 62273631 -188414223 + (TG)n Simple_repeat Simple_repeat 2 34 0 509 118 12 0 chr2 62274040 62274125 -188413729 + L1MB1 LINE L1 6082 6167 -1 204 322 26 35 chr2 62274216 62274331 -188413523 - L2 LINE L2 -10 3303 3190 3393 216 73 11 chr2 62274335 62275148 -188412706 - L1ME1 LINE L1 -5 6161 5299 190 219 88 150 chr2 62275153 62275264 -188412590 + MIR SINE MIR 100 200 -62 2362 133 55 24 chr2 62275264 62275685 -188412169 + Tigger2a DNA MER2_type 1 434 0 190 219 88 150 chr2 62275685 62275733 -188412121 + MIR SINE MIR 200 249 -13 1321 148 8 0 chr2 62276069 62276305 -188411549 - L1MA4 LINE L1 -11 6289 6052 352 330 84 17 chr2 62276345 62276642 -188411212 + L1ME LINE L1 5392 5708 -462 1782 128 6 87 chr2 62279091 62279412 -188408442 + AluSx SINE Alu 3 297 -15 22 0 0 0 chr2 62279422 62279444 -188408410 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 62279621 62279642 -188408212 + AT_rich Low_complexity Low_complexity 1 21 0 285 225 35 7 chr2 62280465 62280607 -188407247 + (TA)n Simple_repeat Simple_repeat 2 147 0 369 75 0 0 chr2 62280623 62280676 -188407178 + (TG)n Simple_repeat Simple_repeat 1 53 0 22 0 0 0 chr2 62282148 62282170 -188405684 + AT_rich Low_complexity Low_complexity 1 22 0 362 222 19 37 chr2 62282673 62282781 -188405073 + LTR33A LTR ERVL 418 523 0 22 56 0 0 chr2 62283435 62283471 -188404383 + AT_rich Low_complexity Low_complexity 1 36 0 180 348 101 0 chr2 62284443 62284532 -188403322 - L2 LINE L2 -50 3222 3125 353 330 93 30 chr2 62285786 62286022 -188401832 - MIR SINE MIR -11 251 1 216 250 0 0 chr2 62287143 62287187 -188400667 + CT-rich Low_complexity Low_complexity 1 44 0 181 212 0 0 chr2 62288109 62288142 -188399712 + L2 LINE L2 3251 3283 -30 223 303 0 0 chr2 62288176 62288242 -188399612 + MIR SINE MIR 89 154 -108 298 234 413 18 chr2 62288260 62288594 -188399260 + LTR33A LTR ERVL 2 467 -56 281 211 127 0 chr2 62288600 62288671 -188399183 + LTR33A LTR ERVL 444 523 0 257 217 36 48 chr2 62288673 62288756 -188399098 + MIR SINE MIR 162 243 -19 260 294 43 0 chr2 62289461 62289553 -188398301 + MIR SINE MIR 81 176 -86 21 0 0 0 chr2 62291469 62291490 -188396364 + AT_rich Low_complexity Low_complexity 1 21 0 205 357 27 18 chr2 62292667 62292779 -188395075 + MIR SINE MIR 33 145 -63 1607 169 86 38 chr2 62294860 62295232 -188392622 + MLT1B LTR MaLR 1 390 0 22 0 0 0 chr2 62295394 62295416 -188392438 + AT_rich Low_complexity Low_complexity 1 22 0 226 315 112 0 chr2 62295729 62295907 -188391947 + L1ME4a LINE L1 4918 5115 -1031 21 0 0 0 chr2 62296330 62296351 -188391503 + AT_rich Low_complexity Low_complexity 1 21 0 723 251 147 44 chr2 62296375 62296880 -188390974 + L1ME4a LINE L1 5520 6076 -45 349 351 21 31 chr2 62297005 62297196 -188390658 + MER5A DNA MER1_type 1 189 0 551 251 27 43 chr2 62299772 62299959 -188387895 + L2 LINE L2 3115 3298 -15 21 36 0 0 chr2 62300019 62300047 -188387807 + AT_rich Low_complexity Low_complexity 1 28 0 439 226 28 15 chr2 62300361 62300493 -188387361 - MLT1F1 LTR MaLR 0 571 451 1269 134 29 58 chr2 62300545 62300662 -188387192 + L1MA5A LINE L1 6026 6145 -152 1982 139 0 0 chr2 62300662 62300975 -188386879 + AluSx SINE Alu 1 313 0 1269 134 29 58 chr2 62300975 62301131 -188386723 + L1MA5A LINE L1 6145 6292 -5 648 233 103 118 chr2 62301163 62301579 -188386275 - MLT1F1 LTR MaLR -154 413 1 445 206 8 10 chr2 62301972 62302080 -188385774 - L1MA10 LINE L1 -23 6285 6035 670 194 6 12 chr2 62302354 62302518 -188385336 - L1MC3 LINE L1 -2 8036 7670 207 286 32 0 chr2 62302543 62302606 -188385248 + L2 LINE L2 2757 2821 -493 23 0 0 0 chr2 62304710 62304733 -188383121 + AT_rich Low_complexity Low_complexity 1 23 0 344 285 51 19 chr2 62304992 62305150 -188382704 + L1ME LINE L1 330 492 -5904 296 342 32 42 chr2 62305225 62305415 -188382439 + L1ME LINE L1 646 833 -5563 291 285 25 102 chr2 62305435 62305670 -188382184 + L1ME LINE L1 771 987 -5422 3217 253 70 22 chr2 62305670 62307096 -188380758 + L1ME LINE L1 2722 4215 -2191 2464 247 57 5 chr2 62307097 62307874 -188379980 - L1M4 LINE L1 -743 5403 4587 608 241 98 17 chr2 62307902 62308076 -188379778 - MIR SINE MIR -7 255 68 309 264 64 64 chr2 62308447 62308557 -188379297 - L2 LINE L2 -4 3268 3159 234 0 0 0 chr2 62309853 62309879 -188377975 + (A)n Simple_repeat Simple_repeat 1 26 0 254 197 16 49 chr2 62311916 62311977 -188375877 - L2 LINE L2 0 3272 3214 31 20 0 20 chr2 62312001 62312023 -188375831 + AT_rich Low_complexity Low_complexity 1 22 -26 1629 203 3 0 chr2 62312023 62312309 -188375545 - AluJo SINE Alu -25 287 1 31 20 0 20 chr2 62312309 62312335 -188375519 + AT_rich Low_complexity Low_complexity 22 48 0 307 316 84 55 chr2 62312338 62312575 -188375279 + L1MEd LINE L1 122 365 -5754 268 307 148 50 chr2 62312818 62313095 -188374759 + L1MEd LINE L1 950 1253 -4866 278 366 37 10 chr2 62313196 62313494 -188374360 + L1MEd LINE L1 1426 1731 -4579 1816 187 0 13 chr2 62313616 62313932 -188373922 + AluJb SINE Alu 1 312 0 393 302 90 31 chr2 62313963 62314251 -188373603 + L1MEd LINE L1 1911 2215 -4095 377 143 0 13 chr2 62314256 62314333 -188373521 + (GA)n Simple_repeat Simple_repeat 1 76 0 219 261 7 28 chr2 62314306 62314448 -188373406 + GA-rich Low_complexity Low_complexity 3 141 0 * 441 274 208 23 chr2 62314450 62314753 -188373101 + L1MEd LINE L1 2252 2610 -3519 364 162 0 15 chr2 62314785 62314853 -188373001 + MLT2A2 LTR ERVL 387 453 0 363 280 76 95 chr2 62314859 62315510 -188372344 + L1MEd LINE L1 3056 3750 -2379 1021 332 12 29 chr2 62315511 62315927 -188371927 + MLT1I LTR MaLR 1 409 0 673 273 64 81 chr2 62316026 62316335 -188371519 + L1MEd LINE L1 3861 4174 -1955 2537 61 0 0 chr2 62316335 62316645 -188371209 + AluY SINE Alu 1 310 -1 673 273 64 81 chr2 62316645 62317117 -188370737 + L1MEd LINE L1 4174 4630 -1499 556 104 0 0 chr2 62317117 62317194 -188370660 + MADE1 DNA Mariner 2 78 -2 673 273 64 81 chr2 62317194 62317234 -188370620 + L1MEd LINE L1 4630 4669 -1460 303 276 9 9 chr2 62317308 62317413 -188370441 + L1MEd LINE L1 4859 4963 -1166 186 103 0 0 chr2 62317442 62317471 -188370383 + (TTAAA)n Simple_repeat Simple_repeat 4 32 0 764 22 0 0 chr2 62318049 62318138 -188369716 + 5S rRNA rRNA 1 89 -32 275 197 16 16 chr2 62318400 62318461 -188369393 - L1P LINE L1 -1906 4240 4180 23 0 0 0 chr2 62318718 62318741 -188369113 + AT_rich Low_complexity Low_complexity 1 23 0 1585 157 17 37 chr2 62318741 62319035 -188368819 - AluJo SINE Alu -24 288 1 471 299 22 4 chr2 62319043 62319274 -188368580 - L1M4 LINE L1 -2275 3871 3637 2654 180 27 0 chr2 62319424 62319951 -188367903 - L1MB8 LINE L1 -1 6177 5637 25 31 0 0 chr2 62320032 62320064 -188367790 + AT_rich Low_complexity Low_complexity 1 32 0 432 245 10 1 chr2 62320081 62320192 -188367662 - L1MB8 LINE L1 -558 5626 5530 1980 200 65 5 chr2 62320261 62320509 -188367345 - L1MB8 LINE L1 -614 5570 5338 1906 58 12 8 chr2 62320509 62320766 -188367088 - L1PA13 LINE L1 -5 6158 5901 1980 200 65 5 chr2 62320766 62321133 -188366721 - L1MB8 LINE L1 -846 5338 4917 320 331 40 14 chr2 62321385 62321533 -188366321 + L1MC4a LINE L1 5775 5926 -1882 43993 42 3 0 chr2 62322177 62328310 -188359544 + L1PA4 LINE L1 2 6152 -3 2575 129 5 0 chr2 62329657 62330030 -188357824 + THE1C LTR MaLR 1 375 0 405 315 91 26 chr2 62330681 62331059 -188356795 + L1ME LINE L1 5255 5661 -460 494 213 0 0 chr2 62331107 62331201 -188356653 + MLT1F1 LTR MaLR 2 95 -472 845 207 50 0 chr2 62331201 62331399 -188356455 - L1MA4 LINE L1 -6 6294 6087 1722 222 71 55 chr2 62331400 62331877 -188355977 + MLT1F1 LTR MaLR 63 547 -20 31 58 0 0 chr2 62332222 62332274 -188355580 + AT_rich Low_complexity Low_complexity 1 52 0 472 284 32 26 chr2 62334484 62334639 -188353215 - MIR SINE MIR -73 189 34 29 70 0 0 chr2 62335998 62336055 -188351799 + AT_rich Low_complexity Low_complexity 1 57 0 840 304 103 21 chr2 62336365 62336783 -188351071 - L2 LINE L2 -7 3306 2855 479 298 94 48 chr2 62337028 62337400 -188350454 - L2 LINE L2 -1038 2276 1888 218 32 32 0 chr2 62338165 62338196 -188349658 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 367 304 10 77 chr2 62339135 62339286 -188348568 + MER5A DNA MER1_type 9 146 -43 3318 137 20 5 chr2 62339286 62339848 -188348006 - L1MC1 LINE L1 0 6333 5764 367 304 10 77 chr2 62339848 62339890 -188347964 + MER5A DNA MER1_type 146 189 0 264 200 0 0 chr2 62339998 62340068 -188347786 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 1456 182 122 18 chr2 62340593 62340922 -188346932 + MLT1A1 LTR MaLR 1 363 -2 422 202 96 0 chr2 62341768 62341862 -188345992 + MER58 DNA MER1_type 1 103 -112 821 298 83 26 chr2 62341996 62342416 -188345438 + MLT1J2 LTR MaLR 4 447 -3 615 266 82 39 chr2 62342988 62343221 -188344633 + MIR SINE MIR 20 262 0 10272 73 5 0 chr2 62344905 62345252 -188342602 + L1PA7 LINE L1 3936 4280 -1874 2264 104 0 0 chr2 62345252 62345549 -188342305 + AluSc SINE Alu 1 297 -12 10272 73 5 0 chr2 62345549 62347447 -188340407 + L1PA7 LINE L1 4280 6149 -5 24 0 0 0 chr2 62347635 62347659 -188340195 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr2 62348209 62348246 -188339608 + AT_rich Low_complexity Low_complexity 1 37 0 440 354 90 5 chr2 62350196 62350419 -188337435 - MIR SINE MIR -12 250 9 227 223 54 71 chr2 62351576 62351688 -188336166 - MIR SINE MIR -43 219 110 28 48 0 0 chr2 62352068 62352110 -188335744 + AT_rich Low_complexity Low_complexity 1 42 0 257 237 0 66 chr2 62353680 62353756 -188334098 + HAL1b LINE L1 356 426 -922 183 80 0 0 chr2 62354473 62354498 -188333356 + (TG)n Simple_repeat Simple_repeat 2 26 0 300 347 96 28 chr2 62354540 62354903 -188332951 - L1ME4a LINE L1 -133 5988 5601 1948 143 62 8 chr2 62355625 62355981 -188331873 + THE1C LTR MaLR 1 375 0 344 232 89 0 chr2 62356167 62356180 -188331674 - L1MA10 LINE L1 0 6334 6322 2457 237 102 34 chr2 62356180 62357414 -188330440 - L1ME1 LINE L1 -4 6231 4901 345 219 24 0 chr2 62357421 62357503 -188330351 - L1ME1 LINE L1 -1602 4613 4530 932 87 0 0 chr2 62357503 62357629 -188330225 - AluY SINE Alu -14 297 172 1754 262 61 10 chr2 62357635 62358061 -188329793 - L1ME1 LINE L1 -1678 4537 4067 180 0 0 0 chr2 62358061 62358081 -188329773 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1754 262 61 10 chr2 62358081 62358279 -188329575 - L1ME1 LINE L1 -2148 4067 3881 23 78 0 0 chr2 62358433 62358484 -188329370 + AT_rich Low_complexity Low_complexity 1 51 0 1218 239 3 16 chr2 62358531 62358841 -188329013 + MER63 DNA MER1_type 703 1008 -52 1594 243 56 44 chr2 62358886 62359206 -188328648 - MLT1D LTR MaLR 0 505 175 2271 104 0 0 chr2 62359206 62359504 -188328350 + AluSq SINE Alu 1 298 -15 1594 243 56 44 chr2 62359504 62359682 -188328172 - MLT1D LTR MaLR -330 175 1 1113 307 24 54 chr2 62359718 62360259 -188327595 - L1ME1 LINE L1 -5835 561 37 23 0 0 0 chr2 62360324 62360347 -188327507 + AT_rich Low_complexity Low_complexity 1 23 0 300 223 208 35 chr2 62360813 62361010 -188326844 + L1M4 LINE L1 2130 2360 -3786 1550 132 4 0 chr2 62361120 62361371 -188326483 - L1PA13 LINE L1 0 6163 5912 679 206 101 49 chr2 62361584 62361831 -188326023 - MIR SINE MIR 0 262 3 577 190 0 15 chr2 62362057 62362194 -188325660 + GA-rich Low_complexity Low_complexity 2 136 0 250 275 14 0 chr2 62362992 62363061 -188324793 + (TG)n Simple_repeat Simple_repeat 1 70 0 282 255 248 26 chr2 62363122 62363275 -188324579 + L2 LINE L2 3114 3300 -13 1176 245 85 27 chr2 62364210 62364623 -188323231 + MER63C DNA MER1_type 274 710 -220 212 261 54 0 chr2 62364725 62364817 -188323037 + (TATG)n Simple_repeat Simple_repeat 2 98 0 378 0 0 0 chr2 62365708 62365750 -188322104 + (CA)n Simple_repeat Simple_repeat 2 43 0 525 265 159 28 chr2 62367624 62368051 -188319803 + L1MC4a LINE L1 5665 6147 -1661 30 83 0 0 chr2 62369309 62369381 -188318473 + AT_rich Low_complexity Low_complexity 1 72 0 204 40 0 0 chr2 62369631 62369656 -188318198 + (T)n Simple_repeat Simple_repeat 1 25 0 401 173 86 0 chr2 62369746 62369827 -188318027 + L1MD1 LINE L1 26 113 -6427 4387 222 57 35 chr2 62369842 62371078 -188316776 + L1MD1 LINE L1 580 1842 -4698 * 4434 199 57 36 chr2 62371077 62372517 -188315337 + L1MD1 LINE L1 5064 6517 -119 2031 129 17 0 chr2 62372517 62372812 -188315042 + AluSg SINE Alu 2 301 -9 4434 199 57 36 chr2 62372812 62372935 -188314919 + L1MD1 LINE L1 6517 6636 0 361 264 86 58 chr2 62372966 62373140 -188314714 + MLT2B1 LTR ERVL 261 439 -81 1960 140 0 7 chr2 62373840 62374140 -188313714 + AluSx SINE Alu 1 298 -14 2046 116 10 20 chr2 62375633 62375920 -188311934 + AluSg SINE Alu 1 286 -24 186 43 0 0 chr2 62375920 62375943 -188311911 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 190 185 241 0 chr2 62376326 62376380 -188311474 - L2 LINE L2 -5 3308 3242 1021 252 19 0 chr2 62376420 62376634 -188311220 + MER58A DNA MER1_type 1 218 -6 378 61 0 0 chr2 62377415 62377464 -188310390 + (TG)n Simple_repeat Simple_repeat 2 50 0 2654 19 0 16 chr2 62378273 62378589 -188309265 + AluYa5 SINE Alu 1 311 0 356 303 21 21 chr2 62379163 62379305 -188308549 + MER99 DNA DNA 686 827 -1 1524 169 40 40 chr2 62379478 62379974 -188307880 + pTR5 LTR ERV1 741 1236 -1202 345 67 0 0 chr2 62379972 62380017 -188307837 + pTR5 LTR ERV1 350 394 -2044 * 566 293 5 42 chr2 62380317 62380529 -188307325 - MER63A DNA MER1_type -6 204 1 236 139 0 0 chr2 62383031 62383067 -188304787 - MER117 DNA MER1_type -107 90 55 9863 95 18 5 chr2 62383680 62385861 -188301993 + L1PA7 LINE L1 3951 6152 -2 182 163 41 0 chr2 62387223 62387272 -188300582 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 243 125 0 0 chr2 62389357 62389397 -188298457 + (T)n Simple_repeat Simple_repeat 1 40 0 196 53 53 26 chr2 62392523 62392561 -188295293 + A-rich Low_complexity Low_complexity 2 40 0 246 320 80 35 chr2 62393399 62393599 -188294255 - MIR SINE MIR -35 227 19 288 267 21 0 chr2 62393621 62393815 -188294039 + GA-rich Low_complexity Low_complexity 1 198 0 208 356 0 23 chr2 62394061 62394148 -188293706 + MIR SINE MIR 31 115 -147 848 190 25 6 chr2 62394509 62394672 -188293182 - FRAM SINE Alu 0 166 1 299 285 62 27 chr2 62394707 62394840 -188293014 - MIR SINE MIR -65 143 43 359 354 85 0 chr2 62395703 62395867 -188291987 - MIR SINE MIR -71 191 14 1136 240 26 62 chr2 62397080 62397468 -188290386 - MLT1A2 LTR MaLR 0 374 1 337 36 95 0 chr2 62398763 62398847 -188289007 + (TA)n Simple_repeat Simple_repeat 1 92 0 620 212 0 29 chr2 62399228 62399365 -188288489 - MER58B DNA MER1_type -5 336 204 41219 47 3 0 chr2 62399483 62405619 -188282235 - L1PA4 LINE L1 -1 6154 4 34 42 0 0 chr2 62407403 62407451 -188280403 + AT_rich Low_complexity Low_complexity 1 48 0 799 252 8 43 chr2 62407466 62407700 -188280154 - MLT1D LTR MaLR 0 505 280 381 102 0 0 chr2 62407745 62407804 -188280050 + (TC)n Simple_repeat Simple_repeat 2 60 0 595 210 51 40 chr2 62407838 62408014 -188279840 - MLT1D LTR MaLR -327 178 1 1986 166 0 3 chr2 62408295 62408597 -188279257 - AluSx SINE Alu -11 301 1 355 308 89 14 chr2 62408597 62408738 -188279116 + MIR SINE MIR 22 173 -89 700 190 104 0 chr2 62409044 62409207 -188278647 + MER104 DNA MER2_type 1 180 0 446 316 69 11 chr2 62409378 62409552 -188278302 + MIR SINE MIR 2 185 -77 1050 254 93 55 chr2 62409901 62410373 -188277481 - MLT1E2 LTR MaLR 0 626 137 215 216 0 0 chr2 62410401 62410438 -188277416 + L2 LINE L2 3261 3297 -16 25 0 0 0 chr2 62410493 62410518 -188277336 + AT_rich Low_complexity Low_complexity 1 25 0 1720 162 170 16 chr2 62410527 62410898 -188276956 - MSTA LTR MaLR 0 428 1 6476 135 175 47 chr2 62410898 62412297 -188275557 - MSTA-int LTR MaLR 0 1580 3 1710 141 176 19 chr2 62412299 62412669 -188275185 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr2 62412760 62412784 -188275070 + AT_rich Low_complexity Low_complexity 1 24 0 241 240 0 0 chr2 62412808 62412858 -188274996 + (TG)n Simple_repeat Simple_repeat 1 50 0 307 286 53 96 chr2 62412959 62413230 -188274624 - L1MC/D LINE L1 -537 5796 5538 504 90 26 0 chr2 62413230 62413308 -188274546 + MADE1 DNA Mariner 1 80 0 307 286 53 96 chr2 62413308 62413337 -188274517 - L1MC/D LINE L1 -795 5538 5509 1831 146 47 65 chr2 62413337 62413685 -188274169 - MLT2A2 LTR ERVL 0 554 212 2280 81 7 7 chr2 62413685 62413980 -188273874 - AluY SINE Alu -16 295 1 1831 146 47 65 chr2 62413980 62414189 -188273665 - MLT2A2 LTR ERVL -342 212 1 22 35 0 0 chr2 62414561 62414590 -188273264 + AT_rich Low_complexity Low_complexity 1 29 0 1943 188 5 11 chr2 62415709 62416076 -188271778 + MLT1A1 LTR MaLR 1 365 0 949 232 0 5 chr2 62416607 62416805 -188271049 - MER58A DNA MER1_type 0 224 28 191 292 0 0 chr2 62416932 62416980 -188270874 - L2 LINE L2 -9 3263 3216 1736 157 53 58 chr2 62417361 62417737 -188270117 - MLT1A2 LTR MaLR 0 374 1 1056 229 108 104 chr2 62418403 62418940 -188268914 + MLT1H LTR MaLR 11 549 0 221 393 62 0 chr2 62420485 62420630 -188267224 + MIR SINE MIR 1 154 -108 368 181 0 0 chr2 62420632 62420704 -188267150 + MER116 DNA Mariner 9 80 0 908 227 56 9 chr2 62421526 62421846 -188266008 + MSTD LTR MaLR 11 392 -4 341 333 0 7 chr2 62422224 62422365 -188265489 + MARNA DNA Mariner 367 506 -80 21 0 0 0 chr2 62422516 62422537 -188265317 + AT_rich Low_complexity Low_complexity 1 21 0 570 304 92 13 chr2 62423481 62423708 -188264146 + MIR SINE MIR 16 260 -2 241 173 27 27 chr2 62424426 62424501 -188263353 + (CAAA)n Simple_repeat Simple_repeat 2 76 0 22 0 0 0 chr2 62425042 62425064 -188262790 + AT_rich Low_complexity Low_complexity 1 22 0 2475 158 17 5 chr2 62425820 62426239 -188261615 + MSTB LTR MaLR 3 426 0 520 316 71 71 chr2 62426674 62427098 -188260756 + MER115 DNA AcHobo 210 633 -60 2300 117 43 6 chr2 62427315 62427666 -188260188 - THE1B LTR MaLR 0 364 1 2071 146 0 9 chr2 62428027 62428379 -188259475 - AluJb SINE Alu 0 349 1 198 132 57 0 chr2 62429380 62429433 -188258421 + (TA)n Simple_repeat Simple_repeat 2 57 0 497 303 106 0 chr2 62429690 62429878 -188257976 + MIR SINE MIR 52 259 -3 236 273 182 28 chr2 62429950 62430093 -188257761 + MIR SINE MIR 49 213 -49 456 294 59 44 chr2 62432961 62433165 -188254689 + MIR SINE MIR 7 213 -49 1819 171 70 8 chr2 62433460 62433816 -188254038 + MSTB LTR MaLR 1 378 -48 206 229 21 0 chr2 62433844 62433892 -188253962 + MIR SINE MIR 195 243 -19 574 88 77 18 chr2 62433965 62434135 -188253719 + (TA)n Simple_repeat Simple_repeat 1 180 0 701 279 62 0 chr2 62434564 62434772 -188253082 - MIR SINE MIR -2 260 40 1013 217 9 5 chr2 62434790 62435007 -188252847 + MER20 DNA MER1_type 1 218 -1 258 56 0 0 chr2 62435591 62435627 -188252227 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 23520 53 18 6 chr2 62435628 62439499 -188248355 - L1PA5 LINE L1 -11 6143 2235 1917 85 8 4 chr2 62440004 62440274 -188247580 - AluY SINE Alu 0 305 35 188 345 185 8 chr2 62440844 62440963 -188246891 + L2 LINE L2 3129 3268 -4 192 206 127 16 chr2 62441013 62441076 -188246778 + MIR SINE MIR 72 141 -121 482 310 68 40 chr2 62441135 62441590 -188246264 + L1ME2 LINE L1 92 559 -5837 2597 268 81 24 chr2 62441602 62441993 -188245861 + L1ME2 LINE L1 3352 3719 -2496 227 0 0 83 chr2 62441993 62442029 -188245825 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2597 268 81 24 chr2 62442029 62442482 -188245372 + L1ME2 LINE L1 3719 4145 -2070 204 97 0 0 chr2 62442482 62442513 -188245341 + (CA)n Simple_repeat Simple_repeat 2 32 0 2597 268 81 24 chr2 62442513 62443028 -188244826 + L1ME2 LINE L1 4145 4790 -1425 1242 212 38 68 chr2 62443041 62443409 -188244445 - MLT1A2 LTR MaLR -17 357 1 2785 225 35 48 chr2 62443409 62443921 -188243933 + L1ME2 LINE L1 4786 5303 -930 2260 111 0 22 chr2 62443921 62444237 -188243617 - AluSx SINE Alu -3 309 1 2785 225 35 48 chr2 62444237 62445163 -188242691 + L1ME2 LINE L1 5303 6208 -25 2208 122 0 0 chr2 62447488 62447799 -188240055 + AluSx SINE Alu 1 311 -1 2195 96 3 0 chr2 62447804 62448086 -188239768 + AluSp SINE Alu 1 283 -30 186 43 0 0 chr2 62448094 62448117 -188239737 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 234 0 0 0 chr2 62449020 62449046 -188238808 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 263 226 16 0 chr2 62449057 62449150 -188238704 + (TA)n Simple_repeat Simple_repeat 1 94 0 197 139 23 0 chr2 62449151 62449194 -188238660 + GA-rich Low_complexity Low_complexity 1 44 0 25 0 0 0 chr2 62449350 62449375 -188238479 + AT_rich Low_complexity Low_complexity 1 25 0 344 254 264 35 chr2 62449740 62449941 -188237913 - MLT1J2 LTR MaLR -138 312 66 2030 125 7 0 chr2 62449945 62450226 -188237628 + AluSx SINE Alu 1 283 -29 186 161 0 0 chr2 62452156 62452187 -188235667 + L2 LINE L2 3209 3239 -33 21 0 0 0 chr2 62452230 62452251 -188235603 + AT_rich Low_complexity Low_complexity 1 21 0 313 213 19 0 chr2 62452251 62452359 -188235495 + (TA)n Simple_repeat Simple_repeat 2 111 0 3131 198 119 9 chr2 62452683 62453489 -188234365 - L1MD3 LINE L1 0 7995 5447 2156 108 0 23 chr2 62453574 62453879 -188233975 - AluSq SINE Alu -15 298 1 1447 265 75 2 chr2 62454658 62454715 -188233139 + MLT1F1 LTR MaLR 111 162 -405 475 91 11 11 chr2 62454715 62454803 -188233051 + (TCTA)n Simple_repeat Simple_repeat 4 91 0 1447 265 75 2 chr2 62454803 62455171 -188232683 + MLT1F1 LTR MaLR 162 567 0 259 19 77 19 chr2 62458967 62459019 -188228835 + (TA)n Simple_repeat Simple_repeat 2 56 0 759 50 36 61 chr2 62459021 62459285 -188228569 + (TATAA)n Simple_repeat Simple_repeat 1 257 0 406 365 11 28 chr2 62459325 62459506 -188228348 - MIR SINE MIR -82 180 3 * 591 298 39 5 chr2 62459506 62459702 -188228152 + MIR SINE MIR 60 262 0 2322 191 14 9 chr2 62459939 62460384 -188227470 - MLT2B2 LTR ERVL -48 467 21 444 191 0 0 chr2 62460389 62460504 -188227350 - L1MCa LINE L1 -2940 3600 3486 3804 187 20 57 chr2 62460525 62461151 -188226703 - L1MCa LINE L1 -5502 1038 456 1252 164 26 30 chr2 62461151 62461191 -188226663 - L1MB1 LINE L1 -5 6163 6124 3664 152 61 21 chr2 62461191 62461897 -188225957 + MER50 LTR ERV1 1 734 0 1252 164 26 30 chr2 62461897 62462125 -188225729 - L1MB1 LINE L1 -44 6124 5896 3804 187 20 57 chr2 62462125 62462427 -188225427 - L1MCa LINE L1 -6084 456 144 288 274 206 0 chr2 62462480 62462582 -188225272 - MIR3 SINE MIR -45 163 41 1347 268 66 28 chr2 62463881 62464382 -188223472 + LTR33 LTR ERVL 1 520 -1 21 36 0 0 chr2 62464429 62464457 -188223397 + AT_rich Low_complexity Low_complexity 1 28 0 184 375 34 11 chr2 62465267 62465355 -188222499 + MIR SINE MIR 51 140 -68 244 268 34 7 chr2 62466115 62466202 -188221652 + CT-rich Low_complexity Low_complexity 3 153 0 356 300 100 29 chr2 62466426 62466768 -188221086 - L1MEc LINE L1 -3684 2856 2529 234 0 0 0 chr2 62467241 62467267 -188220587 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 333 0 0 0 chr2 62467266 62467303 -188220551 + (GA)n Simple_repeat Simple_repeat 2 38 0 298 269 61 61 chr2 62467318 62467515 -188220339 - L1MEc LINE L1 -854 2047 1802 259 213 38 38 chr2 62468002 62468082 -188219772 + (TGAA)n Simple_repeat Simple_repeat 3 82 0 2071 115 0 7 chr2 62468110 62468397 -188219457 - AluSg SINE Alu -21 289 5 459 291 118 34 chr2 62469632 62469869 -188217985 - MIR SINE MIR 0 262 6 264 149 0 0 chr2 62470581 62470628 -188217226 + (GGGA)n Simple_repeat Simple_repeat 4 50 0 689 116 17 39 chr2 62470628 62470809 -188217045 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 537 122 30 51 chr2 62470811 62471155 -188216699 + GA-rich Low_complexity Low_complexity 1 336 0 180 0 0 0 chr2 62471155 62471175 -188216679 + (CAAG)n Simple_repeat Simple_repeat 2 21 0 1865 257 57 55 chr2 62471941 62472630 -188215224 + L1ME LINE L1 6 684 -5396 2146 119 7 3 chr2 62472630 62472940 -188214914 - AluSq SINE Alu -2 311 1 1865 257 57 55 chr2 62472940 62473520 -188214334 + L1ME LINE L1 684 1261 -4819 530 345 16 0 chr2 62473530 62473721 -188214133 + MLT1J LTR MaLR 68 261 -250 730 214 85 119 chr2 62473849 62474227 -188213627 - MLT1A1 LTR MaLR 0 365 1 219 88 0 0 chr2 62474598 62474632 -188213222 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 7743 22 0 0 chr2 62474641 62475892 -188211962 - L1PA3 LINE L1 -1 6154 4905 2351 236 31 54 chr2 62477106 62477848 -188210006 + MER21B LTR ERV1 13 737 -126 1661 196 113 19 chr2 62479170 62479597 -188208257 + MLT1C LTR MaLR 1 374 0 277 364 33 0 chr2 62479719 62479840 -188208014 - MIR SINE MIR -73 189 65 230 371 42 48 chr2 62480000 62480167 -188207687 - MIR3 SINE MIR -27 181 16 27 62 0 0 chr2 62481123 62481171 -188206683 + AT_rich Low_complexity Low_complexity 1 48 0 270 0 0 0 chr2 62481484 62481514 -188206340 + (TG)n Simple_repeat Simple_repeat 1 30 0 364 343 16 59 chr2 62482136 62482392 -188205462 + MIR3 SINE MIR 8 252 -10 273 29 0 0 chr2 62482504 62482538 -188205316 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 237 132 0 0 chr2 62483356 62483394 -188204460 + (TCC)n Simple_repeat Simple_repeat 3 40 0 21 0 0 0 chr2 62484662 62484683 -188203171 + AT_rich Low_complexity Low_complexity 1 21 0 1738 182 0 3 chr2 62484683 62484974 -188202880 - AluJb SINE Alu -18 294 5 3773 179 33 61 chr2 62485226 62485392 -188202462 + LTR13 LTR ERVK 1 170 -784 2113 84 7 7 chr2 62485392 62485689 -188202165 - AluY SINE Alu -14 297 1 3773 179 33 61 chr2 62485689 62486504 -188201350 + LTR13 LTR ERVK 170 954 0 8704 103 6 16 chr2 62486504 62487868 -188199986 + HERVK13 LTR ERVK 1 1350 -6766 196 75 25 25 chr2 62488793 62488833 -188199021 + (TA)n Simple_repeat Simple_repeat 2 41 0 280 253 52 23 chr2 62489692 62489854 -188198000 - MLT1J LTR MaLR -344 167 6 500 242 25 0 chr2 62489962 62490082 -188197772 + MER94 DNA DNA 3 125 -9 545 320 0 12 chr2 62490526 62490698 -188197156 - MLT1I LTR MaLR -200 209 40 1154 216 9 0 chr2 62490718 62490940 -188196914 - MER58A DNA MER1_type 0 224 1 1353 176 54 32 chr2 62490991 62491270 -188196584 + AluJb SINE Alu 2 286 -26 1981 194 17 3 chr2 62491429 62491789 -188196065 - MLT1A1 LTR MaLR 0 365 1 333 0 0 0 chr2 62492238 62492275 -188195579 + (CA)n Simple_repeat Simple_repeat 2 38 0 231 36 0 0 chr2 62492274 62492302 -188195552 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 468 0 0 0 chr2 62493879 62493931 -188193923 + (TG)n Simple_repeat Simple_repeat 1 52 0 212 271 188 60 chr2 62495250 62495383 -188192471 + MIR3 SINE MIR 14 163 -45 279 0 0 0 chr2 62496950 62496981 -188190873 + (CACCC)n Simple_repeat Simple_repeat 3 33 0 554 93 12 0 chr2 62497827 62497913 -188189941 + (GA)n Simple_repeat Simple_repeat 2 88 0 249 345 18 9 chr2 62498019 62498129 -188189725 - MIR SINE MIR -48 214 104 565 214 46 122 chr2 62498135 62498373 -188189481 + MER58A DNA MER1_type 5 224 0 398 287 30 0 chr2 62498769 62498870 -188188984 - MER5A DNA MER1_type -77 112 9 273 243 50 26 chr2 62499020 62499142 -188188712 + MER5A DNA MER1_type 1 189 0 203 296 170 37 chr2 62500367 62500502 -188187352 + MER5B DNA MER1_type 14 166 -12 488 268 141 45 chr2 62500519 62500548 -188187306 + MIR SINE MIR 16 41 -221 4227 175 15 33 chr2 62500548 62501430 -188186424 - L1MA10 LINE L1 -1 6333 5468 488 268 141 45 chr2 62501430 62501620 -188186234 + MIR SINE MIR 41 256 -6 741 202 191 0 chr2 62503312 62503500 -188184354 - MER58A DNA MER1_type 0 224 1 296 261 96 17 chr2 62503508 62503623 -188184231 + MER5C DNA MER1_type 1 124 -200 21 36 0 0 chr2 62504949 62504977 -188182877 + AT_rich Low_complexity Low_complexity 1 28 0 241 308 22 22 chr2 62505041 62505132 -188182722 + L3b LINE CR1 1144 1234 -349 1717 53 0 5 chr2 62505685 62505891 -188181963 + AluY SINE Alu 30 234 -77 197 33 33 0 chr2 62505900 62505930 -188181924 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 366 80 0 0 chr2 62507463 62507513 -188180341 + (TG)n Simple_repeat Simple_repeat 1 50 0 570 328 13 26 chr2 62508601 62508830 -188179024 - MIR SINE MIR -21 241 16 284 285 51 29 chr2 62509953 62510090 -188177764 - MIR SINE MIR -4 258 119 24 32 0 0 chr2 62510210 62510241 -188177613 + AT_rich Low_complexity Low_complexity 1 31 0 340 254 42 106 chr2 62510362 62510551 -188177303 + MLT1J LTR MaLR 1 177 -334 253 198 148 0 chr2 62510762 62510843 -188177011 + MIR SINE MIR 170 262 0 2703 112 0 3 chr2 62510889 62511265 -188176589 + THE1C LTR MaLR 1 375 0 9507 126 45 20 chr2 62511265 62512807 -188175047 + THE1C-int LTR MaLR 1 1580 0 2536 106 13 24 chr2 62512807 62513185 -188174669 + THE1C LTR MaLR 1 374 -1 430 271 26 26 chr2 62513324 62513475 -188174379 + MER103 DNA DNA 3 153 -13 334 292 0 0 chr2 62514013 62514102 -188173752 - MLT1I LTR MaLR -253 156 68 317 303 83 38 chr2 62514150 62514282 -188173572 - MIR SINE MIR -89 173 36 2405 85 10 0 chr2 62516087 62516393 -188171461 + AluY SINE Alu 1 309 -2 583 213 76 134 chr2 62517436 62517779 -188170075 + MER20B DNA MER1_type 215 537 -246 235 175 0 35 chr2 62517797 62517854 -188170000 + MER20B DNA MER1_type 729 783 0 21 0 0 0 chr2 62517859 62517880 -188169974 + AT_rich Low_complexity Low_complexity 1 21 0 297 351 108 14 chr2 62518961 62519109 -188168745 + L2 LINE L2 3074 3235 -37 1744 178 0 31 chr2 62519733 62520054 -188167800 + AluJo SINE Alu 1 311 -1 230 304 43 43 chr2 62522189 62522281 -188165573 + MIR SINE MIR 152 243 -19 22 35 0 0 chr2 62522291 62522320 -188165534 + AT_rich Low_complexity Low_complexity 1 29 0 191 114 29 0 chr2 62522614 62522649 -188165205 + (TAG)n Simple_repeat Simple_repeat 1 36 0 484 250 80 75 chr2 62522679 62522821 -188165033 - MIR SINE MIR -30 232 92 2108 169 2 54 chr2 62522821 62523050 -188164804 - MLT1B LTR MaLR 0 390 151 198 0 0 0 chr2 62523050 62523072 -188164782 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2041 136 3 0 chr2 62523074 62523361 -188164493 - AluSx SINE Alu -24 288 1 2108 169 2 54 chr2 62523361 62523537 -188164317 - MLT1B LTR MaLR -240 150 3 484 250 80 75 chr2 62523537 62523606 -188164248 - MIR SINE MIR -170 92 20 1142 249 66 33 chr2 62523615 62524817 -188163037 - L1MD3 LINE L1 -12 7983 6684 300 53 0 0 chr2 62524831 62524869 -188162985 + (TCTA)n Simple_repeat Simple_repeat 3 40 0 848 166 14 0 chr2 62525357 62525502 -188162352 + MER58B DNA MER1_type 195 341 0 835 229 36 77 chr2 62527111 62527447 -188160407 - MER46C DNA MER2_type -14 324 3 885 208 66 8 chr2 62527452 62527680 -188160174 - MER58A DNA MER1_type 0 224 1 1975 133 77 11 chr2 62528374 62528726 -188159128 - THE1C LTR MaLR 0 375 1 200 236 18 73 chr2 62530321 62530376 -188157478 - MIR SINE MIR -91 171 120 27 49 0 0 chr2 62530832 62530873 -188156981 + AT_rich Low_complexity Low_complexity 1 41 0 408 20 0 0 chr2 62532039 62532118 -188155736 + (TC)n Simple_repeat Simple_repeat 1 79 -319 2009 111 4 0 chr2 62532118 62532388 -188155466 + AluSg SINE Alu 1 271 -39 408 20 0 0 chr2 62532388 62532437 -188155417 + (TC)n Simple_repeat Simple_repeat 1 49 0 252 0 0 0 chr2 62532436 62532464 -188155390 + (CA)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr2 62533015 62533040 -188154814 + AT_rich Low_complexity Low_complexity 1 25 0 3586 65 0 0 chr2 62533963 62534425 -188153429 + L1PA8 LINE L1 5709 6170 -2 248 361 10 10 chr2 62534736 62534833 -188153021 + L2 LINE L2 3200 3296 -17 227 255 122 10 chr2 62537132 62537230 -188150624 + MIR SINE MIR 30 138 -70 612 236 0 0 chr2 62538969 62539079 -188148775 + MER81 DNA DNA 4 113 -1 390 232 102 28 chr2 62540261 62540438 -188147416 + MLT1L LTR MaLR 90 279 -336 259 224 0 17 chr2 62541044 62541102 -188146752 - MIR SINE MIR -1 261 205 1362 191 48 30 chr2 62541286 62541625 -188146229 - L1MC3 LINE L1 0 7785 5985 192 374 30 0 chr2 62541665 62541764 -188146090 + L2 LINE L2 1804 1905 -1409 184 370 99 47 chr2 62541808 62541935 -188145919 + L2 LINE L2 2394 2513 -801 4234 42 0 4 chr2 62541935 62542455 -188145399 - L1PA8 LINE L1 -2 6170 5653 184 370 99 47 chr2 62542455 62542881 -188144973 + L2 LINE L2 2513 2976 -338 362 261 22 52 chr2 62543198 62543332 -188144522 - L2 LINE L2 -4 3309 3180 1974 129 0 48 chr2 62544459 62544793 -188143061 - AluSx SINE Alu 0 319 1 193 347 13 0 chr2 62544889 62544964 -188142890 - L2 LINE L2 -93 3179 3104 776 68 0 8 chr2 62546752 62546870 -188140984 - LTR9B LTR ERV1 -83 561 445 563 235 28 138 chr2 62547536 62547753 -188140101 + MER91A DNA MER1_type 4 196 0 597 261 109 84 chr2 62548278 62548753 -188139101 + Charlie8 DNA MER1_type 1 487 -1930 186 302 81 0 chr2 62548881 62548967 -188138887 - L3 LINE CR1 -194 1383 1291 482 296 55 75 chr2 62548989 62549388 -188138466 + MLT1I LTR MaLR 19 409 0 22 70 0 0 chr2 62550131 62550174 -188137680 + AT_rich Low_complexity Low_complexity 1 43 0 187 292 250 0 chr2 62550513 62550585 -188137269 + MIR SINE MIR 52 141 -67 215 208 0 21 chr2 62553199 62553247 -188134607 - L2 LINE L2 -20 3252 3206 203 265 20 0 chr2 62553250 62553299 -188134555 + (ATG)n Simple_repeat Simple_repeat 2 51 0 405 328 36 1 chr2 62553364 62553492 -188134362 - MIR SINE MIR -62 146 23 200 139 0 23 chr2 62553553 62553596 -188134258 + (TAA)n Simple_repeat Simple_repeat 3 44 0 206 308 138 23 chr2 62553870 62554000 -188133854 - MIR SINE MIR -65 197 53 312 294 136 60 chr2 62554156 62554340 -188133514 - MIR SINE MIR -6 256 59 393 271 24 71 chr2 62554576 62554746 -188133108 - MIR SINE MIR -73 189 28 250 373 164 8 chr2 62555086 62555220 -188132634 + MER91A DNA MER1_type 1 155 -41 180 77 0 0 chr2 62555473 62555499 -188132355 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 26 74 0 0 chr2 62555965 62556019 -188131835 + AT_rich Low_complexity Low_complexity 1 54 0 748 269 22 56 chr2 62556066 62556389 -188131465 + L2 LINE L2 2979 3290 -23 589 65 11 11 chr2 62560476 62560568 -188127286 + (TG)n Simple_repeat Simple_repeat 1 92 0 194 191 48 63 chr2 62560946 62561009 -188126845 - L2 LINE L2 0 3313 3252 414 0 0 0 chr2 62563375 62563421 -188124433 + (TG)n Simple_repeat Simple_repeat 2 47 0 207 69 0 0 chr2 62564602 62564631 -188123223 + (TC)n Simple_repeat Simple_repeat 1 29 0 187 234 8 32 chr2 62565024 62565148 -188122706 + CT-rich Low_complexity Low_complexity 1 121 0 30 0 0 0 chr2 62566162 62566192 -188121662 + AT_rich Low_complexity Low_complexity 1 30 0 342 338 123 0 chr2 62567855 62568009 -188119845 + MIR3 SINE MIR 30 202 -6 21 36 0 0 chr2 62569079 62569107 -188118747 + AT_rich Low_complexity Low_complexity 1 28 0 275 250 62 0 chr2 62571263 62571327 -188116527 + L2 LINE L2 3185 3252 -20 657 211 34 20 chr2 62571344 62571491 -188116363 - L2 LINE L2 0 3313 3165 319 216 0 0 chr2 62571498 62571572 -188116282 + MER116 DNA Mariner 7 80 0 2158 73 45 18 chr2 62572428 62572714 -188115140 - AluY SINE Alu -17 294 1 31 58 0 0 chr2 62572842 62572894 -188114960 + AT_rich Low_complexity Low_complexity 1 52 0 497 273 43 0 chr2 62573237 62573376 -188114478 - MIR SINE MIR -111 151 7 461 298 107 19 chr2 62574847 62575062 -188112792 - MIR SINE MIR -16 246 13 318 277 122 20 chr2 62576096 62576244 -188111610 - MIR3 SINE MIR -14 194 32 2094 146 6 40 chr2 62578424 62578773 -188109081 - MER1B DNA MER1_type 0 337 1 1366 252 70 9 chr2 62582210 62582639 -188105215 + LTR16B LTR ERVL 2 456 -8 282 269 176 22 chr2 62582657 62582839 -188105015 - MIR SINE MIR 0 262 53 301 281 35 44 chr2 62583697 62583811 -188104043 + MIR SINE MIR 67 179 -83 221 347 99 25 chr2 62585019 62585140 -188102714 - L2 LINE L2 0 3313 3184 973 198 22 36 chr2 62585937 62586159 -188101695 - MER20 DNA MER1_type 0 219 1 208 139 28 0 chr2 62587641 62587677 -188100177 + CT-rich Low_complexity Low_complexity 2 38 0 1438 184 38 51 chr2 62588942 62589312 -188098542 - MLT1A1 LTR MaLR 0 365 1 877 222 6 0 chr2 62589940 62590107 -188097747 - FRAM SINE Alu -12 164 1 289 258 15 15 chr2 62590158 62590224 -188097630 + L2 LINE L2 2562 2627 -687 1673 191 92 32 chr2 62590232 62590698 -188097156 + MLT1D LTR MaLR 12 505 0 192 362 55 43 chr2 62590707 62590964 -188096890 + L2 LINE L2 2626 2885 -429 929 255 16 29 chr2 62591209 62591452 -188096402 - MIR SINE MIR -19 243 4 2511 255 45 57 chr2 62591629 62592692 -188095162 - L1MEc LINE L1 -2391 3824 2749 614 156 0 0 chr2 62592692 62592782 -188095072 - AluJb SINE Alu -24 288 199 2511 255 45 57 chr2 62592782 62593290 -188094564 - L1MEc LINE L1 -3466 2749 2236 2150 155 3 21 chr2 62593290 62593670 -188094184 + THE1C LTR MaLR 1 373 -2 10124 116 45 5 chr2 62593672 62595190 -188092664 + THE1C-int LTR MaLR 1 1580 0 1981 161 21 16 chr2 62595190 62595563 -188092291 + THE1C LTR MaLR 1 375 0 2511 255 45 57 chr2 62595563 62595687 -188092167 - L1MEc LINE L1 -3978 2237 2151 1575 146 146 26 chr2 62595695 62596003 -188091851 - MSTA LTR MaLR 0 428 84 3629 246 81 39 chr2 62596023 62596514 -188091340 - L1MEc LINE L1 -4744 1648 1179 1489 201 9 31 chr2 62596514 62596833 -188091021 - AluJo SINE Alu 0 312 1 3629 246 81 39 chr2 62596833 62597895 -188089959 - L1MEc LINE L1 -5213 1179 42 2219 113 0 31 chr2 62599699 62600019 -188087835 - AluSx SINE Alu 0 312 3 225 0 0 0 chr2 62600723 62600748 -188087106 + (TG)n Simple_repeat Simple_repeat 1 25 0 23 68 0 0 chr2 62601965 62602009 -188085845 + AT_rich Low_complexity Low_complexity 1 44 0 204 143 0 0 chr2 62604519 62604561 -188083293 + (T)n Simple_repeat Simple_repeat 1 42 0 196 300 40 30 chr2 62605139 62605239 -188082615 - MIR3 SINE MIR -4 204 104 243 0 0 0 chr2 62606234 62606261 -188081593 + (T)n Simple_repeat Simple_repeat 1 27 0 242 252 252 9 chr2 62608353 62608464 -188079390 + MIR SINE MIR 55 192 -70 189 0 0 0 chr2 62609973 62609994 -188077860 + (CA)n Simple_repeat Simple_repeat 2 22 0 272 194 10 29 chr2 62610514 62610617 -188077237 + CT-rich Low_complexity Low_complexity 2 102 0 188 122 24 0 chr2 62611116 62611157 -188076697 + CT-rich Low_complexity Low_complexity 2 43 0 284 0 28 0 chr2 62611159 62611195 -188076659 + (CA)n Simple_repeat Simple_repeat 1 37 0 208 289 211 0 chr2 62612575 62612665 -188075189 - MIR SINE MIR -65 143 35 2526 153 59 48 chr2 62612811 62613213 -188074641 + L1MA9 LINE L1 4872 5268 -1044 1710 166 0 14 chr2 62613213 62613503 -188074351 - AluJo SINE Alu -26 286 1 2526 153 59 48 chr2 62613503 62613649 -188074205 + L1MA9 LINE L1 5268 5411 -901 2282 93 0 3 chr2 62613649 62613940 -188073914 + AluSc SINE Alu 1 290 -19 2526 153 59 48 chr2 62613940 62614294 -188073560 + L1MA9 LINE L1 5411 5780 -532 1093 124 6 0 chr2 62614327 62614496 -188073358 + L1MA9 LINE L1 6143 6312 0 2345 96 3 3 chr2 62614567 62614879 -188072975 - AluSp SINE Alu -1 312 1 334 303 0 0 chr2 62614879 62614978 -188072876 + MIR SINE MIR 114 212 -50 22 0 0 0 chr2 62615584 62615606 -188072248 + AT_rich Low_complexity Low_complexity 1 22 0 366 264 94 66 chr2 62615988 62616200 -188071654 + MIR SINE MIR 9 226 -36 183 356 96 17 chr2 62616297 62616412 -188071442 + L2 LINE L2 3141 3264 -8 281 283 176 44 chr2 62616540 62616745 -188071109 - L3 LINE CR1 -974 603 372 229 336 106 60 chr2 62616837 62617120 -188070734 - L3 LINE CR1 -1252 325 30 828 266 107 3 chr2 62618157 62618446 -188069408 + MER5C DNA MER1_type 5 323 -1 2249 100 3 0 chr2 62618540 62618839 -188069015 - AluSp SINE Alu -13 300 1 24 53 0 0 chr2 62620869 62620907 -188066947 + AT_rich Low_complexity Low_complexity 1 38 0 2308 107 7 0 chr2 62621193 62621503 -188066351 - AluSp SINE Alu -1 312 1 217 178 0 22 chr2 62621547 62621592 -188066262 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 330 146 11 22 chr2 62624672 62624761 -188063093 + GA-rich Low_complexity Low_complexity 3 90 0 183 42 0 0 chr2 62625206 62625230 -188062624 + (T)n Simple_repeat Simple_repeat 1 24 0 216 0 0 0 chr2 62625990 62626014 -188061840 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 295 231 10 19 chr2 62627902 62628006 -188059848 + CT-rich Low_complexity Low_complexity 3 105 0 198 71 0 0 chr2 62629585 62629613 -188058241 + (TG)n Simple_repeat Simple_repeat 1 28 0 261 0 0 0 chr2 62630353 62630382 -188057472 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr2 62631053 62631075 -188056779 + AT_rich Low_complexity Low_complexity 1 22 0 203 79 26 0 chr2 62631679 62631717 -188056137 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr2 62633126 62633148 -188054706 + AT_rich Low_complexity Low_complexity 1 22 0 180 200 0 0 chr2 62633336 62633376 -188054478 + (TA)n Simple_repeat Simple_repeat 1 40 0 555 264 193 5 chr2 62633467 62633664 -188054190 + LTR33 LTR ERVL 6 239 -282 231 306 163 20 chr2 62633693 62633791 -188054063 - L2 LINE L2 -2 3311 3200 2232 116 0 0 chr2 62633876 62634179 -188053675 - AluY SINE Alu -8 303 1 25 51 0 0 chr2 62634985 62635024 -188052830 + AT_rich Low_complexity Low_complexity 1 39 0 219 36 0 0 chr2 62635313 62635341 -188052513 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 515 205 39 16 chr2 62635672 62635799 -188052055 - MER69 DNA AcHobo -3 2523 2394 228 349 0 0 chr2 62635798 62635864 -188051990 - MER69 DNA AcHobo -99 78 13 * 410 304 0 0 chr2 62636231 62636346 -188051508 - MIR SINE MIR -64 144 30 929 303 95 48 chr2 62636765 62638180 -188049674 + L1MEd LINE L1 144 1615 -4600 245 266 106 9 chr2 62638452 62638670 -188049184 + L1MEd LINE L1 2058 2296 -4100 394 290 52 83 chr2 62638671 62639019 -188048835 + L1MEd LINE L1 2308 2644 -3571 1738 195 0 10 chr2 62639045 62639347 -188048507 + AluJb SINE Alu 3 301 -11 406 271 25 0 chr2 62639713 62639835 -188048019 - L1MC5 LINE L1 -521 7440 7316 685 194 14 28 chr2 62639992 62640136 -188047718 + FLAM_A SINE Alu 1 142 0 275 151 19 0 chr2 62640177 62640230 -188047624 - L1MC5 LINE L1 -737 7224 7171 513 249 56 86 chr2 62640532 62640926 -188046928 + L1MEd LINE L1 3861 4242 -1973 479 236 62 107 chr2 62640957 62641154 -188046700 + MIR SINE MIR 34 221 -41 1337 132 24 5 chr2 62641154 62641367 -188046487 + L1PA11 LINE L1 5957 6173 -1 479 236 62 107 chr2 62641367 62641394 -188046460 + MIR SINE MIR 221 248 -14 442 260 73 18 chr2 62641476 62641850 -188046004 + L1MEd LINE L1 4250 4650 -1565 454 298 152 47 chr2 62641944 62642326 -188045528 + MLT1G1 LTR MaLR 112 533 -9 308 262 32 0 chr2 62642409 62642535 -188045319 + L1MEd LINE L1 4760 4889 -1326 26 0 0 0 chr2 62642811 62642837 -188045017 + AT_rich Low_complexity Low_complexity 1 26 0 3745 77 63 0 chr2 62642863 62643384 -188044470 - MER41A LTR ERV1 0 554 1 1244 183 93 35 chr2 62645251 62645411 -188042443 - AluJo SINE Alu -3 309 160 1894 113 60 0 chr2 62645411 62645694 -188042160 - AluY SINE Alu -9 302 3 1244 183 93 35 chr2 62645694 62645823 -188042031 - AluJo SINE Alu -152 160 3 215 282 14 28 chr2 62646449 62646520 -188041334 + MIR SINE MIR 137 206 -56 764 273 97 48 chr2 62646737 62647420 -188040434 + HAL1b LINE L1 77 806 -542 291 106 21 0 chr2 62647635 62647682 -188040172 + MADE1 DNA Mariner 3 50 -30 224 128 0 43 chr2 62647756 62647803 -188040051 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 1044 232 137 52 chr2 62647807 62648268 -188039586 + MLT1D LTR MaLR 1 500 -5 21 0 0 0 chr2 62648398 62648419 -188039435 + AT_rich Low_complexity Low_complexity 1 21 0 232 264 0 28 chr2 62648457 62648529 -188039325 - MER103 DNA DNA -86 80 11 273 75 0 0 chr2 62648759 62648799 -188039055 + (GA)n Simple_repeat Simple_repeat 1 40 0 1504 156 63 63 chr2 62649244 62649545 -188038309 + AluJb SINE Alu 1 301 -11 239 255 0 0 chr2 62649874 62649925 -188037929 + CT-rich Low_complexity Low_complexity 2 52 0 21 36 0 0 chr2 62650014 62650042 -188037812 + AT_rich Low_complexity Low_complexity 1 28 0 2081 118 55 22 chr2 62650226 62650589 -188037265 + THE1C LTR MaLR 1 375 0 215 346 74 66 chr2 62651506 62651749 -188036105 + MIR SINE MIR 12 256 -6 359 337 63 6 chr2 62651939 62652114 -188035740 - MIR SINE MIR -10 252 68 2304 121 11 30 chr2 62653070 62653441 -188034413 - THE1B LTR MaLR 0 364 1 1455 149 0 5 chr2 62653472 62653694 -188034160 - AluJb SINE Alu -6 306 86 980 251 5 0 chr2 62654443 62654662 -188033192 - MER58A DNA MER1_type -3 221 2 573 250 0 8 chr2 62654665 62654789 -188033065 + L2 LINE L2 3191 3313 0 237 33 0 0 chr2 62658219 62658249 -188029605 + (CA)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr2 62658810 62658832 -188029022 + AT_rich Low_complexity Low_complexity 1 22 0 481 263 42 72 chr2 62659668 62659999 -188027855 + MLT1G1 LTR MaLR 1 284 -271 369 273 105 0 chr2 62660021 62660164 -188027690 + MLT1G1 LTR MaLR 433 590 0 1437 235 80 24 chr2 62660292 62660803 -188027051 - L1ME2 LINE L1 0 6164 5625 342 341 0 7 chr2 62660803 62660938 -188026916 - L1MEc LINE L1 -6137 259 126 228 244 13 39 chr2 62660945 62661023 -188026831 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 289 152 91 0 chr2 62661023 62661089 -188026765 - L1MEc LINE L1 -6274 122 51 609 265 11 108 chr2 62661203 62661482 -188026372 + MIR SINE MIR 11 262 0 200 194 0 0 chr2 62662013 62662049 -188025805 + (TG)n Simple_repeat Simple_repeat 1 36 0 373 361 57 47 chr2 62662392 62662691 -188025163 + MER115 DNA AcHobo 1 302 -391 915 289 54 3 chr2 62662724 62663022 -188024832 + MER115 DNA AcHobo 373 685 -8 1055 187 0 0 chr2 62663434 62663600 -188024254 + AluJb SINE Alu 131 296 -16 280 325 93 21 chr2 62663810 62664004 -188023850 + MIR SINE MIR 7 214 -48 2150 187 17 118 chr2 62666626 62667327 -188020527 - LTR27 LTR ERV1 0 636 7 186 248 10 20 chr2 62668872 62668973 -188018881 + GA-rich Low_complexity Low_complexity 2 101 0 270 183 0 5 chr2 62669207 62669271 -188018583 + Alu SINE Alu 1 44 -256 1950 134 0 0 chr2 62669271 62669546 -188018308 + AluSx SINE Alu 1 275 -37 220 263 18 0 chr2 62671055 62671112 -188016742 + (TA)n Simple_repeat Simple_repeat 2 59 0 2158 125 6 6 chr2 62671767 62672096 -188015758 - AluSx SINE Alu 0 329 1 31 58 0 0 chr2 62672474 62672526 -188015328 + AT_rich Low_complexity Low_complexity 1 52 0 2371 94 3 0 chr2 62672606 62672914 -188014940 - AluSc SINE Alu 0 309 1 210 37 0 0 chr2 62674118 62674145 -188013709 + (TG)n Simple_repeat Simple_repeat 2 28 0 785 262 18 16 chr2 62674355 62674598 -188013256 - MIR SINE MIR -1 261 17 24 32 0 0 chr2 62675556 62675587 -188012267 + AT_rich Low_complexity Low_complexity 1 31 0 433 252 168 19 chr2 62676114 62676269 -188011585 - MER5A DNA MER1_type 0 189 12 21 0 0 0 chr2 62677337 62677358 -188010496 + AT_rich Low_complexity Low_complexity 1 21 0 405 0 0 0 chr2 62678306 62678351 -188009503 + (TG)n Simple_repeat Simple_repeat 1 45 0 27 0 0 0 chr2 62679218 62679245 -188008609 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr2 62679993 62680023 -188007831 + AT_rich Low_complexity Low_complexity 1 30 0 265 291 117 0 chr2 62681156 62681259 -188006595 + MIR SINE MIR 77 191 -71 912 164 13 0 chr2 62682226 62682385 -188005469 + FRAM SINE Alu 1 160 -16 370 259 82 38 chr2 62682699 62682857 -188004997 + MIR SINE MIR 98 262 0 980 291 4 8 chr2 62684423 62684684 -188003170 - MIR SINE MIR 0 262 3 27 49 0 0 chr2 62685497 62685538 -188002316 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 62687200 62687222 -188000632 + AT_rich Low_complexity Low_complexity 1 22 0 362 204 65 37 chr2 62687810 62687918 -187999936 - MIR SINE MIR -44 218 108 180 0 0 0 chr2 62687945 62687965 -187999889 + (T)n Simple_repeat Simple_repeat 1 20 0 2341 100 10 0 chr2 62687989 62688289 -187999565 - AluSg SINE Alu -7 303 1 21 57 0 0 chr2 62688720 62688755 -187999099 + AT_rich Low_complexity Low_complexity 1 35 0 5534 149 32 7 chr2 62688977 62690805 -187997049 + L1MA4 LINE L1 4425 6298 -2 1983 130 7 3 chr2 62690897 62691215 -187996639 + AluSq SINE Alu 1 313 0 213 326 12 47 chr2 62692115 62692201 -187995653 + L2 LINE L2 3185 3267 -5 472 119 158 0 chr2 62692547 62692648 -187995206 + LTR9B LTR ERV1 445 561 -83 266 73 24 0 chr2 62692648 62692689 -187995165 + (GAAAA)n Simple_repeat Simple_repeat 2 43 0 198 231 218 13 chr2 62692712 62692790 -187995064 - L2 LINE L2 -4 3268 3175 1272 172 0 41 chr2 62693171 62693420 -187994434 - AluJb SINE Alu 0 312 73 180 256 49 24 chr2 62693443 62693525 -187994329 - L2 LINE L2 -112 3201 3118 2830 19 0 0 chr2 62693748 62694063 -187993791 + AluYb8 SINE Alu 1 315 -3 2086 124 3 3 chr2 62695082 62695381 -187992473 - AluSx SINE Alu -9 303 5 226 231 0 0 chr2 62696190 62696242 -187991612 - MLT1I LTR MaLR -273 136 85 282 345 172 0 chr2 62696456 62696601 -187991253 - L2 LINE L2 -346 2968 2799 21 0 0 0 chr2 62698523 62698544 -187989310 + AT_rich Low_complexity Low_complexity 1 21 0 230 313 61 30 chr2 62700327 62700458 -187987396 + L2 LINE L2 3175 3309 -4 253 136 0 34 chr2 62700559 62700618 -187987236 + (CAA)n Simple_repeat Simple_repeat 1 57 0 185 327 18 0 chr2 62700644 62700699 -187987155 + L2 LINE L2 3250 3305 -8 2786 135 34 13 chr2 62701354 62701879 -187985975 - L1MA9 LINE L1 0 6312 5777 300 154 0 0 chr2 62701888 62701940 -187985914 + (TA)n Simple_repeat Simple_repeat 2 53 0 320 221 15 15 chr2 62701997 62702128 -187985726 + (TA)n Simple_repeat Simple_repeat 2 132 0 317 186 12 58 chr2 62702130 62702216 -187985638 - L1MA9 LINE L1 -522 5790 5709 27 0 0 0 chr2 62702351 62702378 -187985476 + AT_rich Low_complexity Low_complexity 1 27 0 1673 160 0 56 chr2 62702379 62702685 -187985169 - AluJo SINE Alu -23 289 1 1160 181 19 162 chr2 62702762 62703182 -187984672 - MLT1A1 LTR MaLR -2 363 4 1835 229 35 0 chr2 62703188 62703612 -187984242 - MLT1A1-int LTR MaLR -3 1732 1294 285 260 0 42 chr2 62703723 62703819 -187984035 - MLT1A1-int LTR MaLR -964 771 680 255 246 0 0 chr2 62703877 62703938 -187983916 - MLT1A2-int LTR MaLR -487 884 824 2471 212 52 47 chr2 62703966 62704621 -187983233 - MLT1A2-int LTR MaLR -1075 660 3 1404 206 12 107 chr2 62704623 62705036 -187982818 - MLT1A2 LTR MaLR 0 374 1 236 317 38 17 chr2 62705509 62705634 -187982220 + MIR SINE MIR 23 146 -62 536 126 42 21 chr2 62706575 62706718 -187981136 + CT-rich Low_complexity Low_complexity 2 147 0 1935 172 22 69 chr2 62707507 62707914 -187979940 + MLT1B LTR MaLR 3 390 0 274 239 28 0 chr2 62708356 62708427 -187979427 - MIR SINE MIR -14 248 176 24 0 0 0 chr2 62709999 62710023 -187977831 + AT_rich Low_complexity Low_complexity 1 24 0 487 286 65 15 chr2 62711507 62711706 -187976148 - MIR SINE MIR -5 257 49 225 0 0 0 chr2 62713491 62713516 -187974338 + (T)n Simple_repeat Simple_repeat 1 25 0 221 299 75 0 chr2 62716552 62716619 -187971235 + L3 LINE CR1 1406 1477 -100 21 0 0 0 chr2 62717771 62717792 -187970062 + AT_rich Low_complexity Low_complexity 1 21 0 2963 108 36 0 chr2 62718055 62718500 -187969354 + L1PA11 LINE L1 5714 6174 0 222 191 0 0 chr2 62718560 62718607 -187969247 + (TATATG)n Simple_repeat Simple_repeat 5 51 0 1039 171 100 100 chr2 62718613 62718755 -187969099 + MLT1A1 LTR MaLR 13 154 -211 1952 121 3 3 chr2 62718755 62719037 -187968817 + AluY SINE Alu 1 282 -29 1039 171 100 100 chr2 62719037 62719245 -187968609 + MLT1A1 LTR MaLR 153 363 -2 246 263 0 0 chr2 62719245 62719303 -187968551 + (TG)n Simple_repeat Simple_repeat 1 58 0 25 0 0 0 chr2 62720216 62720241 -187967613 + AT_rich Low_complexity Low_complexity 1 25 0 204 273 0 0 chr2 62721379 62721445 -187966409 + CT-rich Low_complexity Low_complexity 2 67 0 284 197 49 0 chr2 62721589 62721650 -187966204 + MLT1I LTR MaLR 344 407 -2 879 249 38 8 chr2 62721919 62722156 -187965698 - MIR SINE MIR -11 251 8 336 336 0 41 chr2 62722767 62722913 -187964941 + MIR SINE MIR 11 150 -112 22 0 0 0 chr2 62724170 62724192 -187963662 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 62724972 62724993 -187962861 + AT_rich Low_complexity Low_complexity 1 21 0 208 324 65 28 chr2 62726401 62726509 -187961345 - L2 LINE L2 -8 3264 3153 466 154 0 29 chr2 62728014 62728118 -187959736 + CT-rich Low_complexity Low_complexity 4 104 0 1801 131 11 93 chr2 62728734 62729101 -187958753 + MER1B DNA MER1_type 1 337 0 465 304 48 5 chr2 62729251 62729458 -187958396 + LTR16C LTR ERVL 276 491 0 2305 110 0 0 chr2 62729524 62729832 -187958022 - AluSq SINE Alu 0 313 6 248 256 37 12 chr2 62730973 62731055 -187956799 + GA-rich Low_complexity Low_complexity 1 84 0 2208 122 0 0 chr2 62732759 62733055 -187954799 + AluSx SINE Alu 1 296 -16 2545 218 19 45 chr2 62733360 62733999 -187953855 - MLT1E3 LTR MaLR -2 622 1 2301 97 7 7 chr2 62734566 62734874 -187952980 + AluSx SINE Alu 1 308 -4 2098 131 3 0 chr2 62737118 62737409 -187950445 + AluSx SINE Alu 7 298 -14 34 24 0 0 chr2 62737439 62737480 -187950374 + AT_rich Low_complexity Low_complexity 1 41 0 258 32 0 0 chr2 62737619 62737650 -187950204 + (TG)n Simple_repeat Simple_repeat 2 32 0 304 235 71 20 chr2 62738102 62738200 -187949654 + L1ME4a LINE L1 6016 6118 -3 2232 136 11 22 chr2 62738444 62738812 -187949042 - THE1B LTR MaLR 0 364 1 257 335 114 0 chr2 62739443 62739619 -187948235 - L2 LINE L2 -833 2481 2286 498 209 0 0 chr2 62740823 62740952 -187946902 + (TA)n Simple_repeat Simple_repeat 2 130 0 357 211 0 56 chr2 62741127 62741217 -187946637 + MER33 DNA MER1_type 16 100 -224 632 207 36 0 chr2 62741268 62741379 -187946475 - FLAM_C SINE Alu -28 115 1 791 134 9 97 chr2 62741408 62741625 -187946229 + MER33 DNA MER1_type 127 324 0 31 26 0 0 chr2 62742205 62742243 -187945611 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr2 62742488 62742514 -187945340 + AT_rich Low_complexity Low_complexity 1 26 0 324 326 61 41 chr2 62743784 62743931 -187943923 - MIR3 SINE MIR -55 153 4 409 297 88 36 chr2 62744123 62744372 -187943482 - MIR SINE MIR 0 262 1 2541 112 6 11 chr2 62744770 62745135 -187942719 + THE1B LTR MaLR 2 364 0 10176 115 29 27 chr2 62745135 62746713 -187941141 + THE1B-int LTR MaLR 1 1580 0 2301 125 37 3 chr2 62746713 62747065 -187940789 + THE1B LTR MaLR 1 364 0 1743 164 51 0 chr2 62747835 62748109 -187939745 + AluSx SINE Alu 1 288 -24 780 298 12 0 chr2 62748664 62748922 -187938932 + MIR SINE MIR 2 262 0 847 215 43 48 chr2 62751725 62751911 -187935943 + MER5A DNA MER1_type 2 186 -3 632 187 65 16 chr2 62752065 62752188 -187935666 + Tigger5 DNA MER2_type 1 129 -2194 * 1818 135 126 20 chr2 62752182 62752464 -187935390 + Tigger5 DNA MER2_type 1930 2259 -64 2484 166 29 5 chr2 62752464 62752880 -187934974 - MSTB LTR MaLR 0 426 1 1818 135 126 20 chr2 62752880 62752953 -187934901 + Tigger5 DNA MER2_type 2259 2323 0 495 303 37 10 chr2 62752992 62753275 -187934579 - L2 LINE L2 -9 3304 2954 306 122 0 0 chr2 62754454 62754495 -187933359 + MER5A DNA MER1_type 29 69 -120 180 0 0 0 chr2 62758725 62758745 -187929109 + (TTG)n Simple_repeat Simple_repeat 2 21 0 483 18 0 0 chr2 62758883 62758939 -187928915 + (TG)n Simple_repeat Simple_repeat 2 57 0 23 33 0 0 chr2 62762121 62762151 -187925703 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr2 62764611 62764642 -187923212 + AT_rich Low_complexity Low_complexity 1 31 0 207 114 0 0 chr2 62764911 62764946 -187922908 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 622 239 62 44 chr2 62765871 62766097 -187921757 + L2 LINE L2 3084 3313 0 525 286 57 11 chr2 62766418 62766593 -187921261 + MIR SINE MIR 9 191 -71 374 318 134 44 chr2 62767258 62767846 -187920008 + L1M4 LINE L1 4662 5302 -844 2340 99 3 0 chr2 62768245 62768548 -187919306 + AluSp SINE Alu 1 304 -9 22 0 0 0 chr2 62768854 62768876 -187918978 + AT_rich Low_complexity Low_complexity 1 22 0 734 298 119 24 chr2 62769076 62769747 -187918107 + HAL1b LINE L1 45 779 -569 518 268 163 0 chr2 62769751 62769904 -187917950 - MER5A DNA MER1_type -1 188 11 413 270 61 57 chr2 62770299 62770482 -187917372 + L1MDa LINE L1 2445 2626 -3914 942 171 17 104 chr2 62770482 62770722 -187917132 - MER20 DNA MER1_type 0 219 1 413 270 61 57 chr2 62770722 62771004 -187916850 + L1MDa LINE L1 2626 2913 -3627 256 274 29 10 chr2 62771393 62771495 -187916359 + L1MDa LINE L1 3353 3456 -3084 23 0 0 0 chr2 62771505 62771528 -187916326 + AT_rich Low_complexity Low_complexity 1 23 0 187 289 19 0 chr2 62772221 62772273 -187915581 + MER5B DNA MER1_type 126 178 0 1052 295 101 21 chr2 62772416 62773192 -187914662 + L1MDa LINE L1 4273 5110 -1430 21 36 0 0 chr2 62773255 62773283 -187914571 + AT_rich Low_complexity Low_complexity 1 28 0 331 221 58 29 chr2 62773617 62773721 -187914133 - MIR SINE MIR 0 262 156 233 277 15 15 chr2 62774085 62774150 -187913704 - L2 LINE L2 -4 3309 3245 598 265 56 46 chr2 62774392 62774588 -187913266 + MIR SINE MIR 64 261 -1 1995 104 57 0 chr2 62775289 62775569 -187912285 + AluSx SINE Alu 1 296 -16 1165 144 0 0 chr2 62775698 62775871 -187911983 + MER2 DNA MER2_type 1 173 -172 286 310 242 19 chr2 62776369 62776943 -187910911 + L2 LINE L2 1701 2402 -912 2201 108 6 10 chr2 62777155 62777469 -187910385 - AluSq SINE Alu 0 313 1 245 108 0 0 chr2 62777777 62777814 -187910040 + MADE1 DNA Mariner 2 38 -42 648 286 60 0 chr2 62777900 62778085 -187909769 - MIR SINE MIR -3 259 64 213 224 0 0 chr2 62778277 62778335 -187909519 + GA-rich Low_complexity Low_complexity 1 58 0 216 97 0 0 chr2 62779256 62779287 -187908567 + (A)n Simple_repeat Simple_repeat 1 31 0 2493 55 7 3 chr2 62779298 62779605 -187908249 + AluY SINE Alu 1 308 -3 44 46 0 0 chr2 62780019 62780084 -187907770 + AT_rich Low_complexity Low_complexity 1 65 0 389 238 146 13 chr2 62780346 62780497 -187907357 - MER113 DNA MER1_type? -344 177 7 583 261 0 8 chr2 62782006 62782136 -187905718 - FLAM_A SINE Alu -4 129 1 23 0 0 0 chr2 62783495 62783518 -187904336 + AT_rich Low_complexity Low_complexity 1 23 0 365 311 118 12 chr2 62783694 62783855 -187903999 - MIR3 SINE MIR -10 198 21 412 241 68 46 chr2 62785153 62785315 -187902539 - MIR3 SINE MIR -62 146 4 2827 3 0 0 chr2 62785504 62785807 -187902047 - AluYa5 SINE Alu -8 303 1 180 0 0 0 chr2 62786206 62786226 -187901628 + (ATG)n Simple_repeat Simple_repeat 3 22 0 444 276 41 14 chr2 62786295 62786440 -187901414 - MIR SINE MIR -78 184 36 283 205 248 51 chr2 62786579 62786696 -187901158 + MER91C DNA MER1_type 1 140 0 363 340 103 32 chr2 62788007 62788289 -187899565 + L2 LINE L2 2215 2516 -798 638 311 58 60 chr2 62788625 62789121 -187898733 - L1MEd LINE L1 -4867 1252 758 273 119 0 0 chr2 62789970 62790012 -187897842 + (TCTCCC)n Simple_repeat Simple_repeat 2 43 0 336 365 181 17 chr2 62790423 62790722 -187897132 + L2 LINE L2 2925 3272 0 1185 161 5 0 chr2 62790933 62791126 -187896728 + AluSg/x SINE Alu 114 307 -5 333 118 0 0 chr2 62792201 62792252 -187895602 + (TG)n Simple_repeat Simple_repeat 1 51 0 1681 161 109 0 chr2 62793228 62793532 -187894322 + MER1B DNA MER1_type 1 337 0 209 319 0 0 chr2 62795142 62795211 -187892643 + MIR SINE MIR 124 192 -70 418 319 118 9 chr2 62795303 62795532 -187892322 + MIR SINE MIR 9 262 0 203 156 0 0 chr2 62795791 62795823 -187892031 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 1101 354 63 32 chr2 62796735 62797227 -187890627 + L3 LINE CR1 398 920 -657 2386 125 11 8 chr2 62797227 62797588 -187890266 - THE1B LTR MaLR 0 364 3 1101 354 63 32 chr2 62797588 62797810 -187890044 + L3 LINE CR1 920 1134 -443 246 309 103 21 chr2 62797950 62798047 -187889807 + L3b LINE CR1 1465 1569 -14 267 279 15 0 chr2 62798730 62798798 -187889056 + L2 LINE L2 3195 3263 -9 668 229 48 66 chr2 62798820 62799108 -187888746 + L1MC4a LINE L1 7528 7986 -9 699 209 6 43 chr2 62800170 62800333 -187887521 - MER5A DNA MER1_type -31 158 2 1025 254 5 9 chr2 62800342 62800566 -187887288 + MER58A DNA MER1_type 1 223 -1 258 264 120 66 chr2 62801312 62801479 -187886375 + L2 LINE L2 2949 3124 -148 245 369 83 78 chr2 62802636 62803070 -187884784 - L2 LINE L2 0 3272 2837 576 288 67 54 chr2 62803484 62803856 -187883998 + MLT1I LTR MaLR 4 380 -29 272 182 36 82 chr2 62803858 62803968 -187883886 - MER69 DNA AcHobo 0 2526 2422 * 746 189 21 0 chr2 62803935 62804078 -187883776 - MER69 DNA AcHobo -2379 147 2 192 391 118 0 chr2 62804445 62804555 -187883299 - L2 LINE L2 0 3272 3150 21 36 0 0 chr2 62809316 62809344 -187878510 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 62809506 62809530 -187878324 + AT_rich Low_complexity Low_complexity 1 24 0 253 245 0 0 chr2 62811012 62811065 -187876789 + MIR SINE MIR 54 106 -156 221 262 33 16 chr2 62811207 62811268 -187876586 + L2 LINE L2 3251 3312 -1 260 130 37 0 chr2 62811686 62811740 -187876114 + (TATG)n Simple_repeat Simple_repeat 1 56 0 2089 128 20 0 chr2 62811890 62812186 -187875668 - AluSx SINE Alu -10 302 1 382 285 101 0 chr2 62812249 62812407 -187875447 - L1ME LINE L1 -455 5666 5493 28 0 0 0 chr2 62814909 62814937 -187872917 + AT_rich Low_complexity Low_complexity 1 28 0 5507 125 48 18 chr2 62814937 62815567 -187872287 - L1MA3 LINE L1 -1 7723 7053 3893 168 52 64 chr2 62815567 62816533 -187871321 + LTR13 LTR ERVK 1 954 0 5507 125 48 18 chr2 62816533 62816861 -187870993 - L1MA3 LINE L1 -671 7053 6736 26 0 0 0 chr2 62817055 62817081 -187870773 + AT_rich Low_complexity Low_complexity 1 26 0 7496 25 1 0 chr2 62817081 62818557 -187869297 - L1PA3 LINE L1 -3 6152 4696 15116 180 18 14 chr2 62818557 62820205 -187867649 - L1MA3 LINE L1 -814 6751 5112 2176 103 3 3 chr2 62820205 62820497 -187867357 - AluY SINE Alu -19 292 1 15116 180 18 14 chr2 62820497 62822481 -187865373 - L1MA3 LINE L1 -2453 5112 3100 14598 175 41 13 chr2 62822478 62825102 -187862752 - L1MA3 LINE L1 -4856 2709 12 * 21 0 0 0 chr2 62825701 62825722 -187862132 + AT_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr2 62826418 62826460 -187861394 + AT_rich Low_complexity Low_complexity 1 42 0 504 239 22 22 chr2 62826642 62826776 -187861078 - MLT1J LTR MaLR 0 511 378 351 246 123 8 chr2 62826945 62827067 -187860787 - MLT1J LTR MaLR -369 142 7 341 298 124 25 chr2 62829975 62830217 -187857637 + MLT1F LTR MaLR 240 505 -37 453 228 117 41 chr2 62830504 62830649 -187857205 + MIR SINE MIR 105 260 -2 744 85 8 23 chr2 62831237 62831366 -187856488 + (TTCC)n Simple_repeat Simple_repeat 2 128 0 453 326 86 4 chr2 62831571 62831804 -187856050 + MIR SINE MIR 2 253 -9 344 311 26 84 chr2 62832107 62832180 -187855674 - MIR3 SINE MIR -10 198 122 1461 154 50 38 chr2 62832180 62832499 -187855355 + MER33 DNA MER1_type 2 324 0 344 311 26 84 chr2 62832499 62832615 -187855239 - MIR3 SINE MIR -86 122 20 324 314 36 14 chr2 62833529 62833669 -187854185 - MIR3 SINE MIR -3 205 63 700 282 39 13 chr2 62834439 62834673 -187853181 + MIR SINE MIR 10 249 -13 440 328 41 20 chr2 62835181 62835376 -187852478 + MIR SINE MIR 64 262 0 219 69 0 0 chr2 62837546 62837575 -187850279 + (TC)n Simple_repeat Simple_repeat 1 29 0 459 225 21 56 chr2 62838067 62838209 -187849645 + MIR SINE MIR 80 216 -46 211 278 28 0 chr2 62839233 62839305 -187848549 + MIR SINE MIR 145 218 -44 264 281 0 0 chr2 62839543 62839600 -187848254 - L2 LINE L2 -5 3308 3252 483 240 169 13 chr2 62840326 62840480 -187847374 + MER5A DNA MER1_type 1 178 -11 311 226 12 48 chr2 62840534 62840618 -187847236 - MIR3 SINE MIR -115 93 13 1972 164 0 0 chr2 62842027 62842325 -187845529 + AluSx SINE Alu 1 298 -14 189 171 0 0 chr2 62842600 62842635 -187845219 + A-rich Low_complexity Low_complexity 1 35 0 222 62 0 0 chr2 62843829 62843861 -187843993 + (A)n Simple_repeat Simple_repeat 1 32 0 183 80 0 0 chr2 62844268 62844293 -187843561 + (CATATA)n Simple_repeat Simple_repeat 3 27 0 215 326 82 15 chr2 62845172 62845307 -187842547 + MIR SINE MIR 87 230 -32 337 232 0 53 chr2 62845370 62845465 -187842389 + MIR3 SINE MIR 111 200 -8 392 312 49 4 chr2 62847011 62847206 -187840648 - MIR SINE MIR -50 212 8 214 188 0 29 chr2 62850237 62850306 -187837548 + GA-rich Low_complexity Low_complexity 2 68 0 1923 163 0 22 chr2 62850559 62850878 -187836976 - AluJo SINE Alu 0 312 1 26 0 0 0 chr2 62851212 62851238 -187836616 + AT_rich Low_complexity Low_complexity 1 26 0 237 260 14 0 chr2 62851247 62851320 -187836534 + L1 LINE L1 2945 3018 -3128 247 110 55 27 chr2 62851494 62851591 -187836263 + (TA)n Simple_repeat Simple_repeat 1 99 0 385 290 117 78 chr2 62851631 62852145 -187835709 + L1 LINE L1 3225 3758 -2388 183 186 0 0 chr2 62852653 62852696 -187835158 + CT-rich Low_complexity Low_complexity 2 44 0 352 282 38 80 chr2 62853424 62853637 -187834217 + MIR SINE MIR 9 212 -50 352 260 76 41 chr2 62855382 62855592 -187832262 - MLT1J1 LTR MaLR -129 317 119 645 289 29 10 chr2 62855747 62855951 -187831903 + MIR SINE MIR 48 255 -7 870 263 17 0 chr2 62856187 62856427 -187831427 + LTR16B LTR ERVL 221 464 0 250 291 82 60 chr2 62856801 62856935 -187830919 - L2 LINE L2 -40 3232 3096 2046 157 38 33 chr2 62856938 62857486 -187830368 - MLT2A2 LTR ERVL 0 554 1 199 355 0 11 chr2 62857486 62857579 -187830275 - L2 LINE L2 -224 3048 2957 206 253 25 8 chr2 62858141 62858215 -187829639 + CT-rich Low_complexity Low_complexity 3 125 0 201 274 0 0 chr2 62860437 62860488 -187827366 - MIR3 SINE MIR -49 159 109 1752 175 33 29 chr2 62860493 62861066 -187826788 + MER39 LTR ERV1 6 707 0 2119 144 11 8 chr2 62862001 62862355 -187825499 + THE1A LTR MaLR 1 355 0 457 265 38 45 chr2 62862819 62862951 -187824903 - L2 LINE L2 0 3272 3142 1204 262 89 15 chr2 62863709 62864102 -187823752 - MLT1J2 LTR MaLR -14 436 15 1008 217 14 23 chr2 62864419 62864640 -187823214 - MER20 DNA MER1_type 0 219 1 258 32 0 0 chr2 62865363 62865394 -187822460 + (CA)n Simple_repeat Simple_repeat 2 32 0 472 329 61 6 chr2 62866516 62866680 -187821174 - MIR3 SINE MIR -15 193 21 460 300 46 27 chr2 62867525 62867721 -187820133 + MIR3 SINE MIR 3 202 -6 486 0 0 0 chr2 62869134 62869188 -187818666 + (TG)n Simple_repeat Simple_repeat 1 54 0 204 125 0 0 chr2 62869589 62869621 -187818233 + (CAA)n Simple_repeat Simple_repeat 1 32 0 407 274 42 19 chr2 62870831 62871006 -187816848 - MIR SINE MIR -35 227 49 181 374 61 26 chr2 62871575 62871690 -187816164 - L2 LINE L2 -15 3257 3139 1960 112 56 14 chr2 62873081 62873366 -187814488 - AluSx SINE Alu -11 301 5 2281 94 0 3 chr2 62874283 62874580 -187813274 - AluY SINE Alu -15 296 1 23 0 0 0 chr2 62875378 62875401 -187812453 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr2 62875849 62875889 -187811965 + AT_rich Low_complexity Low_complexity 1 40 0 658 173 8 0 chr2 62876406 62876533 -187811321 - MER63B DNA MER1_type 0 434 307 203 0 37 0 chr2 62876539 62876566 -187811288 + (TA)n Simple_repeat Simple_repeat 1 28 0 919 159 14 14 chr2 62876576 62876721 -187811133 - FRAM SINE Alu -31 145 1 914 254 57 0 chr2 62876721 62877004 -187810850 - MER63B DNA MER1_type -124 312 14 285 267 58 12 chr2 62878272 62878358 -187809496 - MIR SINE MIR -65 143 54 257 264 14 0 chr2 62879240 62879312 -187808542 + MIR3 SINE MIR 135 207 -1 2500 106 19 8 chr2 62879402 62879762 -187808092 + THE1B LTR MaLR 1 364 0 591 213 15 81 chr2 62879782 62879979 -187807875 + L1ME3A LINE L1 5934 6117 -53 875 154 8 150 chr2 62880149 62880242 -187807612 + MER58 DNA MER1_type 2 107 -234 1758 117 23 30 chr2 62880242 62880508 -187807346 - AluSc SINE Alu -45 264 1 875 154 8 150 chr2 62880508 62880561 -187807293 + MER58 DNA MER1_type 107 166 -175 1656 175 7 7 chr2 62880561 62880852 -187807002 + AluJo SINE Alu 7 297 -15 875 154 8 150 chr2 62880852 62880916 -187806938 + MER58 DNA MER1_type 166 172 -169 2286 89 0 17 chr2 62880916 62881218 -187806636 + AluSp SINE Alu 1 297 -16 875 154 8 150 chr2 62881218 62881265 -187806589 + MER58 DNA MER1_type 172 224 -117 207 0 0 0 chr2 62881894 62881917 -187805937 + (CA)n Simple_repeat Simple_repeat 1 23 0 1876 161 23 16 chr2 62882249 62882559 -187805295 - AluJo SINE Alu 0 312 1 276 258 16 118 chr2 62882752 62882938 -187804916 + MIR SINE MIR 6 172 -90 2342 98 3 13 chr2 62883029 62883344 -187804510 + AluSp SINE Alu 1 312 -1 531 332 143 24 chr2 62883530 62883985 -187803869 - L2 LINE L2 0 3313 2805 1330 86 0 0 chr2 62884031 62884206 -187803648 + AluY SINE Alu 130 304 -7 202 290 116 0 chr2 62884216 62884285 -187803569 - L2 LINE L2 -625 2689 2613 1261 221 37 83 chr2 62886384 62886940 -187800914 - MER39 LTR ERV1 -4 703 8 2154 121 0 16 chr2 62887311 62887616 -187800238 - AluSx SINE Alu -12 300 1 668 195 86 36 chr2 62891940 62892161 -187795693 - L1MD2 LINE L1 -18 6341 6110 320 238 105 0 chr2 62892239 62892375 -187795479 - L1MC4 LINE L1 -1300 7022 1976 1870 160 12 26 chr2 62892714 62893058 -187794796 - MER58B DNA MER1_type -2 339 1 2230 131 0 3 chr2 62894633 62894946 -187792908 - AluSx SINE Alu 0 312 1 794 190 45 115 chr2 62895036 62895430 -187792424 - MER39 LTR ERV1 -37 643 301 267 240 93 80 chr2 62895407 62895557 -187792297 - LTR48B LTR ERV1 -489 155 4 * 1970 107 3 62 chr2 62896221 62896530 -187791324 - AluSx SINE Alu -21 291 1 291 344 135 12 chr2 62897227 62897390 -187790464 + MIR3 SINE MIR 14 196 -12 296 286 47 64 chr2 62897488 62897659 -187790195 + MIR SINE MIR 45 212 -50 22 0 0 0 chr2 62898199 62898221 -187789633 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 62898263 62898289 -187789565 + AT_rich Low_complexity Low_complexity 1 26 0 1971 150 17 0 chr2 62898852 62899145 -187788709 + AluSx SINE Alu 1 298 -14 2292 105 3 0 chr2 62899454 62899750 -187788104 + AluSx SINE Alu 3 299 -13 224 352 17 57 chr2 62900232 62900408 -187787446 - MIR SINE MIR -51 211 43 2420 78 0 0 chr2 62900791 62901087 -187786767 - AluY SINE Alu -14 297 2 511 208 139 7 chr2 62901115 62901259 -187786595 - L1ME3A LINE L1 -5 6165 6003 250 154 39 0 chr2 62901282 62901334 -187786520 - L1PA16 LINE L1 -16 6150 6097 * 3992 107 24 1 chr2 62901320 62902030 -187785824 - L1PA16 LINE L1 -311 5855 5129 23 0 0 0 chr2 62902156 62902179 -187785675 + AT_rich Low_complexity Low_complexity 1 23 0 925 71 7 14 chr2 62904294 62904434 -187783420 + (TTTC)n Simple_repeat Simple_repeat 2 140 0 2026 124 0 11 chr2 62904436 62904719 -187783135 - AluSx SINE Alu -32 280 1 1971 153 0 3 chr2 62904788 62905101 -187782753 - AluJb SINE Alu 0 312 1 1052 110 26 7 chr2 62906034 62906189 -187781665 - L1MC1 LINE L1 -14 6319 6162 277 315 30 128 chr2 62906542 62907031 -187780823 - L2 LINE L2 -43 3229 2776 182 231 15 0 chr2 62907571 62907636 -187780218 + (TA)n Simple_repeat Simple_repeat 2 67 0 201 195 0 0 chr2 62907643 62907684 -187780170 + (CA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr2 62908845 62908866 -187778988 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 62909275 62909300 -187778554 + AT_rich Low_complexity Low_complexity 1 25 0 364 287 16 0 chr2 62910838 62910967 -187776887 + (TA)n Simple_repeat Simple_repeat 2 132 0 21 0 0 0 chr2 62910998 62911019 -187776835 + AT_rich Low_complexity Low_complexity 1 21 0 210 118 0 0 chr2 62911030 62911064 -187776790 + (TCCA)n Simple_repeat Simple_repeat 4 37 0 2272 59 42 0 chr2 62911444 62911731 -187776123 - AluY SINE Alu -12 299 1 338 307 26 0 chr2 62911755 62911869 -187775985 - MLT1L LTR MaLR -328 287 171 309 312 72 0 chr2 62912589 62912727 -187775127 - MIR SINE MIR -74 188 41 459 0 0 0 chr2 62912761 62912812 -187775042 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 216 258 15 83 chr2 62912814 62912946 -187774908 - L2 LINE L2 -74 3239 3117 256 350 115 46 chr2 62913097 62913224 -187774630 - L2 LINE L2 -425 2889 2738 1867 145 3 3 chr2 62913224 62913526 -187774328 + AluSx SINE Alu 1 302 0 256 350 115 46 chr2 62913526 62913614 -187774240 - L2 LINE L2 -576 2738 2658 707 192 73 18 chr2 62914419 62914721 -187773133 + MSTD LTR MaLR 5 396 0 363 313 75 50 chr2 62914912 62915072 -187772782 + L2 LINE L2 2931 3094 -178 2305 98 0 3 chr2 62915261 62915567 -187772287 - AluSq SINE Alu -8 305 1 1666 197 7 0 chr2 62915642 62915946 -187771908 - AluJo SINE Alu -5 307 2 215 333 62 0 chr2 62920263 62920344 -187767510 + L3 LINE CR1 1491 1576 -1 2694 26 0 7 chr2 62923404 62923714 -187764140 - AluY SINE Alu -3 308 1 457 238 172 0 chr2 62926013 62926164 -187761690 - MER5A DNA MER1_type -1 188 12 301 324 22 7 chr2 62926957 62927093 -187760761 + CT-rich Low_complexity Low_complexity 3 140 0 22 0 0 0 chr2 62927093 62927115 -187760739 + AT_rich Low_complexity Low_complexity 1 22 0 225 289 47 2 chr2 62927643 62927746 -187760108 + MIR SINE MIR 66 177 -31 1348 261 228 21 chr2 62927805 62928633 -187759221 - L2 LINE L2 -52 3261 2239 2014 109 0 4 chr2 62928655 62928931 -187758923 - AluSx SINE Alu -17 295 21 2449 108 37 3 chr2 62929120 62929472 -187758382 - THE1B LTR MaLR 0 364 1 638 325 35 53 chr2 62930661 62931114 -187756740 - MLT1J2 LTR MaLR -5 445 1 22 0 0 0 chr2 62931276 62931298 -187756556 + AT_rich Low_complexity Low_complexity 1 22 0 3362 154 18 8 chr2 62931354 62931953 -187755901 + MER6A DNA MER2_type 1 605 0 320 256 58 66 chr2 62932092 62932229 -187755625 - MIR SINE MIR -6 256 121 31 0 0 0 chr2 62933102 62933133 -187754721 + AT_rich Low_complexity Low_complexity 1 31 0 282 56 0 0 chr2 62934517 62934553 -187753301 + (TA)n Simple_repeat Simple_repeat 2 37 0 220 232 36 0 chr2 62935309 62935365 -187752489 - MIR SINE MIR -95 167 110 540 50 100 0 chr2 62935725 62936004 -187751850 + (TA)n Simple_repeat Simple_repeat 1 307 0 7317 38 6 0 chr2 62936004 62937395 -187750459 - L1PA5 LINE L1 -8 6146 4751 485 331 66 33 chr2 62937805 62937945 -187749909 + MIR SINE MIR 11 164 -98 1866 129 7 0 chr2 62937945 62938217 -187749637 + AluJb SINE Alu 38 311 -1 485 331 66 33 chr2 62938217 62938318 -187749536 + MIR SINE MIR 164 260 -2 1571 206 7 16 chr2 62938679 62938985 -187748869 + AluJb SINE Alu 1 303 -9 312 291 74 34 chr2 62940055 62940203 -187747651 + MIR SINE MIR 7 143 -65 2432 89 3 0 chr2 62941847 62942150 -187745704 - AluSp SINE Alu -9 304 1 399 241 214 0 chr2 62943856 62943968 -187743886 - MER5A DNA MER1_type -1 188 53 272 266 156 37 chr2 62945381 62945490 -187742364 - MIR SINE MIR -68 140 19 24 0 0 0 chr2 62945543 62945567 -187742287 + AT_rich Low_complexity Low_complexity 1 24 0 1165 107 0 0 chr2 62945567 62945717 -187742137 - AluSg/x SINE Alu -26 286 137 2029 118 0 4 chr2 62946909 62947209 -187740645 + AluSx SINE Alu 12 310 0 2332 81 3 7 chr2 62948547 62948857 -187738997 - AluSp SINE Alu -4 309 1 257 325 89 64 chr2 62949017 62949297 -187738557 + L2 LINE L2 2986 3272 0 2038 129 0 3 chr2 62950688 62950997 -187736857 - AluSx SINE Alu 0 308 1 862 279 96 17 chr2 62951631 62951986 -187735868 + L2 LINE L2 2927 3309 -4 277 152 45 15 chr2 62952029 62952095 -187735759 - L1ME4a LINE L1 -66 6055 5988 229 395 105 6 chr2 62952193 62952355 -187735499 + MER5B DNA MER1_type 1 178 0 529 258 66 54 chr2 62952493 62952553 -187735301 - MIR SINE MIR -1 261 203 2141 181 3 0 chr2 62952553 62952918 -187734936 - MER47A DNA MER2_type 0 366 1 529 258 66 54 chr2 62952918 62953090 -187734764 - MIR SINE MIR -59 203 26 21 0 0 0 chr2 62953104 62953125 -187734729 + AT_rich Low_complexity Low_complexity 1 21 0 349 289 151 0 chr2 62953228 62953394 -187734460 + MIR SINE MIR 70 260 -2 640 333 83 45 chr2 62954288 62954756 -187733098 + L2 LINE L2 1789 2274 -1040 2310 93 0 7 chr2 62954843 62955145 -187732709 - AluSx SINE Alu -12 300 1 461 289 158 61 chr2 62955331 62955760 -187732094 + L2 LINE L2 2841 3311 -2 464 93 13 0 chr2 62957185 62957260 -187730594 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 22 56 0 0 chr2 62957273 62957309 -187730545 + AT_rich Low_complexity Low_complexity 1 36 0 249 353 145 28 chr2 62957314 62957569 -187730285 + L3 LINE CR1 1247 1531 -46 643 274 66 25 chr2 62957645 62957886 -187729968 + MER102b DNA MER1_type 81 331 -10 238 206 27 27 chr2 62959865 62959938 -187727916 - MER116 DNA Mariner -5 75 3 301 370 0 8 chr2 62961058 62961177 -187726677 - MIR SINE MIR -51 211 94 2236 98 0 0 chr2 62962183 62962479 -187725375 - AluY SINE Alu -15 296 1 23 0 0 0 chr2 62962547 62962570 -187725284 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 62963784 62963804 -187724050 + (A)n Simple_repeat Simple_repeat 1 20 0 228 35 0 0 chr2 62963807 62963836 -187724018 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 339 130 0 0 chr2 62964766 62964820 -187723034 + (TA)n Simple_repeat Simple_repeat 1 54 0 1275 159 5 9 chr2 62966074 62966288 -187721566 - AluJb SINE Alu -5 307 95 305 294 10 20 chr2 62966493 62966595 -187721259 + L1ME LINE L1 5581 5681 -440 423 0 0 0 chr2 62967692 62967739 -187720115 + (CA)n Simple_repeat Simple_repeat 2 48 0 614 95 11 0 chr2 62967957 62968052 -187719802 + (TA)n Simple_repeat Simple_repeat 1 96 0 228 254 3 38 chr2 62968487 62968593 -187719261 + MIR3 SINE MIR 71 174 -34 238 286 75 22 chr2 62968770 62968888 -187718966 + L1ME LINE L1 5487 5605 -559 1624 212 131 38 chr2 62968972 62969559 -187718295 + L1ME2 LINE L1 5487 6164 0 512 285 173 22 chr2 62970812 62971089 -187716765 + L3 LINE CR1 1246 1564 -13 224 307 71 57 chr2 62971221 62971361 -187716493 - L3 LINE CR1 -75 1502 1361 1648 201 64 10 chr2 62971363 62971469 -187716385 + Charlie1b DNA MER1_type 3 102 -2659 1547 104 5 0 chr2 62971469 62971680 -187716174 - AluY SINE Alu -9 302 91 1648 201 64 10 chr2 62971680 62971961 -187715893 + Charlie1b DNA MER1_type 102 411 -112 2623 127 3 8 chr2 62971966 62972352 -187715502 - MER4E LTR ERV1 -28 751 368 288 111 0 0 chr2 62972338 62972383 -187715471 + Charlie1b DNA MER1_type 403 447 -76 * 1981 122 30 0 chr2 62972456 62972751 -187715103 + AluSx SINE Alu 1 304 -8 1255 348 72 25 chr2 62972757 62973490 -187714364 - L3 LINE CR1 -223 1354 587 328 342 60 0 chr2 62974638 62974755 -187713099 - L2 LINE L2 -5 3267 3144 32 86 0 0 chr2 62975692 62975773 -187712081 + AT_rich Low_complexity Low_complexity 1 81 0 552 259 26 78 chr2 62976174 62976406 -187711448 - MIR SINE MIR -24 238 19 240 301 53 23 chr2 62976608 62976741 -187711113 - MLT1J LTR MaLR -51 460 324 458 286 83 33 chr2 62976791 62977032 -187710822 - MLT1J LTR MaLR -258 253 1 189 0 0 0 chr2 62977394 62977415 -187710439 + (TG)n Simple_repeat Simple_repeat 1 21 0 389 230 54 30 chr2 62977758 62977905 -187709949 - MLT1I LTR MaLR -10 440 291 217 132 0 0 chr2 62980073 62980111 -187707743 + (T)n Simple_repeat Simple_repeat 1 38 0 28 0 0 0 chr2 62980751 62980779 -187707075 + AT_rich Low_complexity Low_complexity 1 28 0 298 280 0 0 chr2 62981441 62981516 -187706338 + CT-rich Low_complexity Low_complexity 1 75 0 24 32 0 0 chr2 62982442 62982473 -187705381 + AT_rich Low_complexity Low_complexity 1 31 0 198 171 0 0 chr2 62982990 62983031 -187704823 + (CA)n Simple_repeat Simple_repeat 1 41 0 188 135 27 0 chr2 62984308 62984345 -187703509 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 180 0 0 0 chr2 62984970 62984990 -187702864 + (T)n Simple_repeat Simple_repeat 1 20 0 22 88 0 0 chr2 62986319 62986376 -187701478 + AT_rich Low_complexity Low_complexity 1 57 0 1392 176 101 16 chr2 62986873 62987180 -187700674 - MER46C DNA MER2_type -3 335 3 368 264 38 28 chr2 62987332 62987438 -187700416 - L2 LINE L2 -10 3303 3197 327 49 0 0 chr2 62987480 62987521 -187700333 + (CA)n Simple_repeat Simple_repeat 1 41 0 304 317 59 5 chr2 62987593 62987779 -187700075 + MER117 DNA MER1_type 1 196 -1 21 0 0 0 chr2 62989456 62989477 -187698377 + AT_rich Low_complexity Low_complexity 1 21 0 445 278 173 4 chr2 62989981 62990236 -187697618 + LTR16B LTR ERVL 3 300 -164 237 239 0 0 chr2 62990282 62990328 -187697526 + LTR16B LTR ERVL 419 464 0 185 280 113 65 chr2 62990661 62990829 -187697025 - L2 LINE L2 0 3313 3138 408 207 51 26 chr2 62991055 62991153 -187696701 + MER5A DNA MER1_type 10 98 -80 184 247 34 67 chr2 62991073 62991162 -187696692 - MER5A DNA MER1_type -13 176 91 * 25 51 0 0 chr2 62991426 62991465 -187696389 + AT_rich Low_complexity Low_complexity 1 39 0 825 189 41 0 chr2 62993506 62993675 -187694179 + MER5B DNA MER1_type 1 176 -2 292 289 67 11 chr2 62996105 62996195 -187691659 - MER5A DNA MER1_type -94 95 1 857 124 5 129 chr2 62997846 62998048 -187689806 + MER5B DNA MER1_type 2 178 0 213 217 50 17 chr2 62998345 62998405 -187689449 + MIR SINE MIR 94 155 -107 189 147 0 0 chr2 62999186 62999220 -187688634 + (TG)n Simple_repeat Simple_repeat 1 34 0 195 129 0 0 chr2 62999628 62999659 -187688195 + (A)n Simple_repeat Simple_repeat 1 31 0 253 327 91 30 chr2 63000755 63000920 -187686934 + MER5A DNA MER1_type 10 184 -5 220 109 22 22 chr2 63001246 63001292 -187686562 + CT-rich Low_complexity Low_complexity 2 47 0 21 0 0 0 chr2 63001594 63001615 -187686239 + AT_rich Low_complexity Low_complexity 1 21 0 575 259 74 45 chr2 63002192 63002435 -187685419 - LTR16A1 LTR ERVL -204 253 4 251 313 172 0 chr2 63002732 63002831 -187685023 + MIR SINE MIR 37 152 -56 28 29 0 0 chr2 63004936 63004971 -187682883 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr2 63005153 63005195 -187682659 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr2 63008118 63008153 -187679701 + AT_rich Low_complexity Low_complexity 1 35 0 2097 171 29 3 chr2 63008979 63009359 -187678495 - MLT1B LTR MaLR 0 390 1 668 274 42 0 chr2 63009606 63009796 -187678058 + MIR SINE MIR 61 258 -4 1547 188 21 0 chr2 63010444 63010573 -187677281 + AluJb SINE Alu 3 128 -184 207 88 0 0 chr2 63010573 63010607 -187677247 + (TA)n Simple_repeat Simple_repeat 1 34 0 1547 188 21 0 chr2 63010607 63010764 -187677090 + AluJb SINE Alu 128 295 -17 1284 161 0 9 chr2 63010938 63011162 -187676692 - AluJb SINE Alu -4 308 87 21 0 0 0 chr2 63011275 63011296 -187676558 + AT_rich Low_complexity Low_complexity 1 21 0 387 157 226 0 chr2 63011297 63011399 -187676455 - FRAM SINE Alu 0 166 42 186 339 0 0 chr2 63011537 63011599 -187676255 - MER5A DNA MER1_type 0 189 128 471 251 147 44 chr2 63011837 63012142 -187675712 + L1MC/D LINE L1 5329 5661 -469 1806 170 27 0 chr2 63012409 63012703 -187675151 + AluJb SINE Alu 1 302 -10 327 198 45 45 chr2 63015969 63016080 -187671774 + MIR SINE MIR 87 197 -65 1453 309 118 28 chr2 63016471 63017666 -187670188 + L2 LINE L2 1936 3289 -24 613 313 91 0 chr2 63017637 63017867 -187669987 + MIR SINE MIR 9 259 -3 * 24 32 0 0 chr2 63017957 63017988 -187669866 + AT_rich Low_complexity Low_complexity 1 31 0 1778 174 13 0 chr2 63018039 63018338 -187669516 + AluJo SINE Alu 1 303 -9 1813 139 0 21 chr2 63018422 63018709 -187669145 - AluSx SINE Alu -19 293 13 4691 252 85 40 chr2 63018959 63019454 -187668400 - L1MEc LINE L1 -1727 4488 4017 2498 180 4 42 chr2 63019454 63019565 -187668289 - MER66B LTR ERV1 0 486 372 1775 168 17 7 chr2 63019565 63019863 -187667991 - AluSx SINE Alu -11 301 1 2498 180 4 42 chr2 63019863 63020256 -187667598 - MER66B LTR ERV1 -114 372 1 4691 252 85 40 chr2 63020256 63022145 -187665709 - L1MEc LINE L1 -2198 4017 2044 946 311 60 67 chr2 63022591 63023296 -187664558 - L1MEc LINE L1 -5330 875 176 1036 232 0 81 chr2 63023302 63023404 -187664450 + AluJo SINE Alu 20 129 -183 1577 168 6 71 chr2 63023404 63023726 -187664128 - AluJb SINE Alu -8 304 4 1036 232 0 81 chr2 63023726 63023920 -187663934 + AluJo SINE Alu 129 292 -20 192 333 131 30 chr2 63024761 63024860 -187662994 - L3 LINE CR1 -1 1576 1468 333 68 0 0 chr2 63025132 63025176 -187662678 + (TG)n Simple_repeat Simple_repeat 1 44 0 1813 173 77 29 chr2 63027632 63027657 -187660197 - MLT2C2 LTR ERVL -8 456 434 414 0 0 0 chr2 63027657 63027703 -187660151 + (TG)n Simple_repeat Simple_repeat 2 47 0 1813 173 77 29 chr2 63027703 63028052 -187659802 - MLT2C2 LTR ERVL -30 434 64 412 21 0 0 chr2 63028236 63028284 -187659570 - MLT2C2 LTR ERVL -416 48 1 528 276 103 28 chr2 63028601 63028920 -187658934 - L1ME LINE L1 -464 5657 5315 414 208 8 52 chr2 63028960 63029225 -187658629 + (TA)n Simple_repeat Simple_repeat 1 253 0 226 246 0 16 chr2 63030613 63030674 -187657180 + MIR SINE MIR 203 262 0 1970 127 0 66 chr2 63031198 63031530 -187656324 - AluSq SINE Alu -1 312 3 260 337 0 12 chr2 63031976 63032059 -187655795 - MIR3 SINE MIR -36 172 91 4452 148 5 15 chr2 63032778 63033340 -187654514 - L1PA16 LINE L1 -1 6165 5610 2076 92 32 7 chr2 63033340 63033622 -187654232 + AluSc SINE Alu 1 289 -20 4452 148 5 15 chr2 63033622 63033814 -187654040 - L1PA16 LINE L1 -556 5610 5418 1264 199 132 20 chr2 63034395 63034751 -187653103 + MSTD LTR MaLR 1 396 0 641 205 82 157 chr2 63034886 63035242 -187652612 + MLT1D LTR MaLR 1 329 -297 853 193 11 11 chr2 63035248 63035424 -187652430 + FRAM SINE Alu 1 176 0 817 198 15 50 chr2 63035425 63035627 -187652227 + MLT1D LTR MaLR 310 504 -1 213 298 32 11 chr2 63035924 63036018 -187651836 + MIR SINE MIR 2 97 -165 * 234 250 0 0 chr2 63035998 63036050 -187651804 + MIR SINE MIR 211 262 0 316 280 119 47 chr2 63037624 63037860 -187649994 - L1M4 LINE L1 -2809 3337 3085 376 285 73 13 chr2 63037961 63038112 -187649742 - L1MC5 LINE L1 -48 7913 7754 26 0 0 0 chr2 63038124 63038150 -187649704 + AT_rich Low_complexity Low_complexity 1 26 0 181 252 0 36 chr2 63038180 63038291 -187649563 + (TATG)n Simple_repeat Simple_repeat 2 108 0 338 311 42 6 chr2 63038673 63038840 -187649014 - L1M4 LINE L1 -3646 2500 2328 30596 102 11 12 chr2 63038861 63044558 -187643296 + L1PA7 LINE L1 748 6455 -14 448 259 60 30 chr2 63050657 63050823 -187637031 - MIR SINE MIR -6 256 86 23 33 0 0 chr2 63053799 63053829 -187634025 + AT_rich Low_complexity Low_complexity 1 30 0 299 304 38 17 chr2 63054130 63054260 -187633594 + MIR SINE MIR 16 151 -71 922 289 221 26 chr2 63054845 63055343 -187632511 - MLT1G LTR MaLR 0 590 1 223 192 19 0 chr2 63055841 63055893 -187631961 + (TTCA)n Simple_repeat Simple_repeat 3 55 0 493 290 87 0 chr2 63055970 63056153 -187631701 - MIR SINE MIR 0 262 64 279 133 0 0 chr2 63057290 63057335 -187630519 + (A)n Simple_repeat Simple_repeat 1 45 0 353 273 78 23 chr2 63058582 63058710 -187629144 - MIR SINE MIR -108 154 20 741 296 175 2 chr2 63059922 63060327 -187627527 + L2 LINE L2 2831 3305 -8 217 354 58 9 chr2 63061147 63061289 -187626565 + MIR SINE MIR 45 189 -63 534 264 104 44 chr2 63062470 63062883 -187624971 - L1ME4a LINE L1 -31 6090 5653 180 289 96 0 chr2 63063087 63063139 -187624715 - L2 LINE L2 -60 3212 3156 566 249 88 18 chr2 63063549 63063766 -187624088 + MIR SINE MIR 31 262 0 685 122 0 0 chr2 63064198 63064296 -187623558 - Tigger7 DNA MER2_type 0 2487 2390 990 228 129 0 chr2 63064310 63064534 -187623320 - Tigger7 DNA MER2_type -2234 253 1 223 274 32 0 chr2 63064603 63064665 -187623189 + CT-rich Low_complexity Low_complexity 1 64 0 27 49 0 0 chr2 63064941 63064982 -187622872 + AT_rich Low_complexity Low_complexity 1 41 0 404 374 39 13 chr2 63065114 63065344 -187622510 - HAL1b LINE L1 -740 608 373 28 79 0 0 chr2 63068531 63068594 -187619260 + AT_rich Low_complexity Low_complexity 1 63 0 351 164 0 0 chr2 63068862 63068917 -187618937 + FLAM SINE Alu 71 125 -8 7696 42 10 1 chr2 63169073 63170183 -187517671 - L1P2 LINE L1 -674 5481 4363 1078 290 105 11 chr2 63170210 63170675 -187517179 + L2 LINE L2 2805 3313 0 263 227 27 0 chr2 63170785 63170860 -187516994 - LTR67 LTR ERVL 0 557 481 266 297 0 0 chr2 63171285 63171349 -187516505 - MER115 DNA AcHobo -628 65 2 353 319 32 43 chr2 63171588 63171776 -187516078 - LTR67 LTR ERVL -368 189 4 550 237 17 40 chr2 63171836 63172009 -187515845 - L2 LINE L2 -596 2718 2550 1264 233 21 6 chr2 63173589 63173919 -187513935 + L1ME1 LINE L1 4446 4780 -1366 905 188 0 46 chr2 63173925 63174122 -187513732 - MER58B DNA MER1_type 0 341 154 508 209 6 98 chr2 63174191 63174230 -187513624 - MER58B DNA MER1_type -2272 148 107 5330 44 0 0 chr2 63174230 63174867 -187512987 + L1PA5 LINE L1 5516 6152 -2 508 209 6 98 chr2 63174867 63174990 -187512864 - MER58B DNA MER1_type -2313 107 1 824 225 69 103 chr2 63174990 63175426 -187512428 + L1ME1 LINE L1 4779 5199 -947 374 207 138 0 chr2 63175423 63175539 -187512315 + L1ME1 LINE L1 5740 5871 -295 * 429 174 18 9 chr2 63175586 63175695 -187512159 + (TA)n Simple_repeat Simple_repeat 2 111 0 379 286 31 66 chr2 63175718 63175945 -187511909 + L1MA10 LINE L1 5945 6320 -3 1495 277 102 21 chr2 63176497 63176916 -187510938 + L1M4 LINE L1 3417 3801 -2345 4610 118 16 23 chr2 63176916 63177072 -187510782 + L1PB3 LINE L1 5411 5567 -587 2251 110 3 3 chr2 63177072 63177381 -187510473 + AluSx SINE Alu 1 309 -3 4610 118 16 23 chr2 63177381 63177971 -187509883 + L1PB3 LINE L1 5567 6152 -2 1495 277 102 21 chr2 63177971 63178359 -187509495 + L1M4 LINE L1 3801 4289 -1857 683 247 72 21 chr2 63178541 63178873 -187508981 + L1M4 LINE L1 4345 4693 -1453 901 200 0 0 chr2 63178910 63179075 -187508779 - AluSg/x SINE Alu -5 307 143 255 231 22 22 chr2 63179109 63179200 -187508654 + L1M4 LINE L1 4862 4952 -1194 21 36 0 0 chr2 63179471 63179499 -187508355 + AT_rich Low_complexity Low_complexity 1 28 0 542 319 71 9 chr2 63179790 63180016 -187507838 + MIR SINE MIR 11 250 -12 197 98 24 0 chr2 63180313 63180354 -187507500 + (TTTTTG)n Simple_repeat Simple_repeat 4 45 0 22 35 0 0 chr2 63181580 63181609 -187506245 + AT_rich Low_complexity Low_complexity 1 29 0 1086 97 0 0 chr2 63182564 63182708 -187505146 - AluSg/x SINE Alu 0 310 167 1183 241 8 8 chr2 63182727 63182968 -187504886 - MIR SINE MIR -12 250 10 225 132 0 0 chr2 63183554 63183592 -187504262 + (CAA)n Simple_repeat Simple_repeat 1 38 0 746 292 89 10 chr2 63184162 63184453 -187503401 - L3b LINE CR1 -156 1427 1114 291 28 0 0 chr2 63184797 63184833 -187503021 + (TG)n Simple_repeat Simple_repeat 2 37 0 250 287 21 11 chr2 63184834 63184928 -187502926 + MER117 DNA MER1_type 30 124 -73 460 103 0 26 chr2 63185210 63185288 -187502566 + MADE1 DNA Mariner 3 78 -2 970 247 80 31 chr2 63185961 63186361 -187501493 + MLT1C LTR MaLR 45 467 0 346 292 29 7 chr2 63186387 63186524 -187501330 - LTR33 LTR ERVL -282 239 100 388 343 133 17 chr2 63187640 63187873 -187499981 + MIR SINE MIR 1 260 -2 24 32 0 0 chr2 63189016 63189047 -187498807 + AT_rich Low_complexity Low_complexity 1 31 0 1266 207 109 45 chr2 63189976 63190445 -187497409 - MLT1D LTR MaLR 0 505 7 2089 121 0 3 chr2 63190449 63190739 -187497115 - AluSx SINE Alu -23 289 1 233 250 33 0 chr2 63190751 63190811 -187497043 - MIR SINE MIR -80 182 121 244 200 36 18 chr2 63191264 63191319 -187496535 - L2 LINE L2 -33 3239 3184 219 345 48 0 chr2 63191385 63191469 -187496385 - MIR SINE MIR 0 262 175 225 146 0 0 chr2 63191913 63191961 -187495893 + (T)n Simple_repeat Simple_repeat 1 48 0 16967 29 0 0 chr2 63191962 63194741 -187493113 - L1PA2 LINE L1 -2 6153 3376 13416 28 0 0 chr2 63194741 63196437 -187491417 + L1PA2 LINE L1 1674 3369 -2777 1794 177 0 7 chr2 63197205 63197510 -187490344 - AluJb SINE Alu -1 311 9 205 207 0 52 chr2 63198931 63198989 -187488865 + (TG)n Simple_repeat Simple_repeat 2 56 0 333 47 0 0 chr2 63199295 63199338 -187488516 + (A)n Simple_repeat Simple_repeat 1 43 0 2096 119 7 0 chr2 63199771 63200064 -187487790 - AluSx SINE Alu -17 295 1 1086 232 17 27 chr2 63200170 63200467 -187487387 + MLT1H LTR MaLR 58 351 -198 21 0 0 0 chr2 63200787 63200808 -187487046 + AT_rich Low_complexity Low_complexity 1 21 0 207 231 15 15 chr2 63201775 63201840 -187486014 + (TTCA)n Simple_repeat Simple_repeat 4 68 0 596 303 25 1 chr2 63202759 63203071 -187484783 + LTR16C LTR ERVL 71 434 -57 385 168 19 9 chr2 63203282 63203389 -187484465 + CT-rich Low_complexity Low_complexity 3 110 0 355 286 59 0 chr2 63204804 63204923 -187482931 - MIR SINE MIR -81 181 56 613 234 130 72 chr2 63204931 63205433 -187482421 - MLT1H1 LTR MaLR -4 544 18 22 35 0 0 chr2 63205451 63205480 -187482374 + AT_rich Low_complexity Low_complexity 1 29 0 697 209 11 57 chr2 63205689 63205866 -187481988 - MIR SINE MIR -43 219 51 375 23 0 0 chr2 63207299 63207343 -187480511 + (TA)n Simple_repeat Simple_repeat 2 45 0 2345 109 0 0 chr2 63207346 63207658 -187480196 - AluSx SINE Alu 0 312 1 186 195 24 0 chr2 63207997 63208038 -187479816 - L2 LINE L2 -5 3308 3267 189 171 0 0 chr2 63208977 63209012 -187478842 + CT-rich Low_complexity Low_complexity 3 37 0 606 53 0 0 chr2 63209371 63209493 -187478361 + AluY SINE Alu 209 330 0 2324 152 30 53 chr2 63209904 63210339 -187477515 - MSTB LTR MaLR -1 425 1 498 293 151 15 chr2 63210858 63211117 -187476737 - L2 LINE L2 -80 3233 2940 203 286 11 55 chr2 63211183 63211274 -187476580 - L2 LINE L2 -243 3070 2984 311 238 79 10 chr2 63211399 63211500 -187476354 + MLT1L LTR MaLR 195 302 -313 637 329 54 46 chr2 63211525 63211935 -187475919 - L2 LINE L2 -8 3305 2893 438 306 42 67 chr2 63212008 63212292 -187475562 - L2 LINE L2 -904 2410 2134 1302 246 9 35 chr2 63212483 63212821 -187475033 - L1M4 LINE L1 -6207 335 7 1607 194 57 31 chr2 63212829 63214093 -187473761 + L1MD1 LINE L1 4848 6234 -8 2472 243 63 23 chr2 63214114 63215316 -187472538 + L1ME2 LINE L1 4906 6155 -9 262 234 16 0 chr2 63216132 63216196 -187471658 - L2 LINE L2 -1 3312 3248 1963 140 0 3 chr2 63217647 63217953 -187469901 + AluSx SINE Alu 1 305 0 618 51 0 0 chr2 63218055 63218134 -187469720 + MADE1 DNA Mariner 1 79 -1 722 221 20 0 chr2 63218210 63218359 -187469495 + MLT1B LTR MaLR 1 152 -238 638 219 51 45 chr2 63218336 63218514 -187469340 + MLT1B LTR MaLR 46 224 -166 * 2401 91 3 0 chr2 63219257 63219565 -187468289 + AluSc SINE Alu 1 309 0 25 83 0 0 chr2 63222144 63222204 -187465650 + AT_rich Low_complexity Low_complexity 1 60 0 1493 158 19 93 chr2 63222797 63223119 -187464735 + AluJb SINE Alu 1 298 -14 197 283 7 112 chr2 63223212 63223364 -187464490 + L2 LINE L2 2555 2690 -624 219 88 0 0 chr2 63223419 63223453 -187464401 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 713 308 114 31 chr2 63223455 63224241 -187463613 - L2 LINE L2 -8 3305 2448 2114 146 8 38 chr2 63224262 63224632 -187463222 - MLT1A1 LTR MaLR -6 359 1 450 327 64 42 chr2 63224642 63224972 -187462882 - L2 LINE L2 -905 2409 2073 180 111 0 0 chr2 63226223 63226250 -187461604 + (TG)n Simple_repeat Simple_repeat 1 27 0 530 283 11 11 chr2 63226691 63226868 -187460986 + MARNA DNA Mariner 240 416 -170 241 271 43 0 chr2 63227953 63228023 -187459831 - HAL1 LINE L1 -2422 85 13 251 232 52 62 chr2 63229231 63229355 -187458499 - MIR SINE MIR -63 145 59 281 274 0 74 chr2 63229417 63229512 -187458342 + MIR SINE MIR 28 115 -147 737 244 60 55 chr2 63229986 63230344 -187457510 - MLT1H1 LTR MaLR -187 403 32 236 146 0 21 chr2 63230872 63230920 -187456934 + (TG)n Simple_repeat Simple_repeat 2 48 0 372 43 0 0 chr2 63233673 63233719 -187454135 + (TG)n Simple_repeat Simple_repeat 2 47 0 245 265 51 61 chr2 63234701 63234799 -187453055 - L1ME LINE L1 -533 5588 5492 370 306 73 47 chr2 63234930 63235231 -187452623 - L1ME LINE L1 -3102 3044 2736 391 291 44 122 chr2 63235247 63235724 -187452130 - L1ME LINE L1 -3557 2589 2150 518 191 9 38 chr2 63236250 63236355 -187451499 + MIR SINE MIR 34 135 -73 4981 180 27 5 chr2 63236618 63237707 -187450147 - L1PA16 LINE L1 -16 6150 5041 326 301 119 14 chr2 63237930 63238073 -187449781 - HAL1 LINE L1 -346 2161 2004 517 313 55 0 chr2 63238077 63238234 -187449620 + LTR33 LTR ERVL 13 178 -343 400 94 62 0 chr2 63238234 63238298 -187449556 + MLT2B3 LTR ERVL 1 68 -486 222 62 0 0 chr2 63238298 63238330 -187449524 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2015 104 0 11 chr2 63238333 63238612 -187449242 - AluSg SINE Alu -34 276 1 1879 202 79 62 chr2 63238740 63239210 -187448644 + MLT2B3 LTR ERVL 77 554 0 254 325 58 17 chr2 63239436 63239556 -187448298 + LTR33 LTR ERVL 397 521 0 1165 256 116 78 chr2 63239662 63240479 -187447375 - L1ME3A LINE L1 -5 6165 5318 228 122 0 0 chr2 63240542 63240583 -187447271 + (TG)n Simple_repeat Simple_repeat 2 42 0 327 238 0 0 chr2 63240588 63240651 -187447203 + Tigger5 DNA MER2_type 1 63 -2260 283 268 0 14 chr2 63240655 63240726 -187447128 - Tigger5 DNA MER2_type -3 2320 2251 1265 162 5 0 chr2 63241602 63241812 -187446042 - L1MC1 LINE L1 0 6333 6123 1935 144 51 38 chr2 63241812 63242228 -187445626 - THE1A LTR MaLR 0 428 1 11503 102 10 1 chr2 63242228 63243794 -187444060 - THE1A-int LTR MaLR 0 1580 1 2609 89 11 0 chr2 63243796 63244145 -187443709 - THE1A LTR MaLR -2 353 1 704 143 27 0 chr2 63244145 63244257 -187443597 - L1MC1 LINE L1 -206 6127 6013 207 170 0 38 chr2 63244792 63244845 -187443009 + T-rich Low_complexity Low_complexity 4 54 0 244 239 0 18 chr2 63246226 63246339 -187441515 + (TA)n Simple_repeat Simple_repeat 1 111 0 1365 242 71 45 chr2 63246495 63246958 -187440896 - MLT1H LTR MaLR -29 520 46 943 61 30 0 chr2 63247639 63247770 -187440084 + MER85 DNA T2_type 1 135 -4 308 229 133 0 chr2 63249010 63249093 -187438761 - MIR SINE MIR -90 172 79 212 259 0 17 chr2 63252258 63252316 -187435538 + (CTA)n Simple_repeat Simple_repeat 2 58 0 207 182 0 0 chr2 63252705 63252738 -187435116 + L2 LINE L2 3267 3299 -14 226 241 23 0 chr2 63253024 63253111 -187434743 + GA-rich Low_complexity Low_complexity 2 90 0 1649 201 7 0 chr2 63253136 63253430 -187434424 - AluJo SINE Alu -16 296 1 11216 219 21 16 chr2 63253472 63257369 -187430485 + L1PA16 LINE L1 2242 6157 -9 26 0 0 0 chr2 63257366 63257392 -187430462 + AT_rich Low_complexity Low_complexity 1 26 0 * 576 171 19 9 chr2 63257574 63257679 -187430175 + AluJb SINE Alu 202 307 -5 23 78 0 0 chr2 63257907 63257958 -187429896 + AT_rich Low_complexity Low_complexity 1 51 0 26 0 0 0 chr2 63258010 63258036 -187429818 + AT_rich Low_complexity Low_complexity 1 26 0 37 39 0 0 chr2 63258373 63258424 -187429430 + AT_rich Low_complexity Low_complexity 1 51 0 2085 138 0 3 chr2 63259022 63259333 -187428521 + AluSx SINE Alu 1 310 -2 2120 107 3 3 chr2 63259706 63260004 -187427850 + MER41A LTR ERV1 1 298 -256 298 177 48 0 chr2 63260308 63260370 -187427484 - MIR SINE MIR -99 163 99 687 307 28 5 chr2 63260933 63261151 -187426703 - MIR SINE MIR -38 224 2 283 333 74 7 chr2 63261483 63261618 -187426236 - MIR SINE MIR -7 255 112 188 282 171 51 chr2 63262900 63263017 -187424837 + MIR SINE MIR 20 150 -112 198 103 0 0 chr2 63263231 63263260 -187424594 + (CATA)n Simple_repeat Simple_repeat 2 30 0 334 213 0 0 chr2 63264123 63264184 -187423670 - L2 LINE L2 -2 3311 3251 684 231 56 36 chr2 63266331 63266582 -187421272 + ORSL DNA AcHobo 1 256 -19 1785 168 39 6 chr2 63267228 63267585 -187420269 - L1MA7 LINE L1 -10 6281 5913 237 314 20 10 chr2 63268484 63268586 -187419268 + L2 LINE L2 1362 1464 -1850 252 313 96 68 chr2 63269162 63269702 -187418152 + L2 LINE L2 1932 2486 -828 989 181 0 94 chr2 63269868 63270145 -187417709 - L1MB8 LINE L1 0 6178 5928 4315 169 24 3 chr2 63270150 63271638 -187416216 - L1MA8 LINE L1 -241 6050 4533 198 0 0 0 chr2 63271640 63271662 -187416192 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 6512 84 4 0 chr2 63271662 63273160 -187414694 - L1PA8 LINE L1 -16 6156 4648 2194 119 0 19 chr2 63273166 63273484 -187414370 + AluSx SINE Alu 1 312 0 4456 100 0 2 chr2 63273503 63274124 -187413730 + L1P LINE L1 4018 4637 -1509 * 6624 174 18 7 chr2 63274121 63275426 -187412428 - L1MA8 LINE L1 -1598 4548 3229 232 338 14 14 chr2 63275434 63275505 -187412349 - L3 LINE CR1 -123 1454 1384 209 450 0 0 chr2 63275593 63275693 -187412161 - L3 LINE CR1 -372 1205 1106 3012 237 42 43 chr2 63276765 63277798 -187410056 - L1ME1 LINE L1 -8 6227 5206 204 40 0 0 chr2 63277798 63277823 -187410031 + (TG)n Simple_repeat Simple_repeat 2 26 0 3012 237 42 43 chr2 63277823 63278014 -187409840 - L1ME1 LINE L1 -1029 5206 5016 21 0 0 0 chr2 63278023 63278044 -187409810 + AT_rich Low_complexity Low_complexity 1 21 0 4058 279 96 31 chr2 63278050 63278506 -187409348 - L1ME1 LINE L1 -1414 4801 4376 2234 113 0 3 chr2 63278506 63278816 -187409038 - AluSc SINE Alu 0 309 1 4058 279 96 31 chr2 63278816 63281028 -187406826 - L1ME1 LINE L1 -1839 4376 2007 1390 168 128 7 chr2 63281034 63281331 -187406523 + MER44D DNA MER2_type 1 603 -6 749 301 40 36 chr2 63281333 63281887 -187405967 - L1ME1 LINE L1 -4396 2000 1445 7959 158 32 22 chr2 63281908 63282743 -187405111 + Tigger1 DNA MER2_type 1 856 -1562 2183 103 7 0 chr2 63282743 63283035 -187404819 - AluSp SINE Alu -19 294 1 7959 158 32 22 chr2 63283035 63283621 -187404233 + Tigger1 DNA MER2_type 856 1435 -983 4953 147 21 14 chr2 63283619 63284463 -187403391 + Tigger1 DNA MER2_type 1568 2417 -1 * 876 269 71 27 chr2 63284548 63284863 -187402991 - L1ME1 LINE L1 -5054 1342 1042 2779 198 91 9 chr2 63284863 63285515 -187402339 + MER44D DNA MER2_type 1 705 0 876 269 71 27 chr2 63285515 63285790 -187402064 - L1ME1 LINE L1 -5354 1042 726 245 283 8 49 chr2 63286115 63286197 -187401657 + MIR3 SINE MIR 78 160 -48 473 249 51 40 chr2 63286718 63286895 -187400959 - MIR SINE MIR -1 261 83 * 771 215 12 23 chr2 63286894 63287066 -187400788 + MER5B DNA MER1_type 9 178 0 203 304 77 75 chr2 63287164 63287524 -187400330 + L3b LINE CR1 1154 1570 -7 240 130 0 0 chr2 63288633 63288679 -187399175 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 231 329 0 14 chr2 63290703 63290773 -187397081 + L2 LINE L2 2075 2143 -1171 628 297 92 24 chr2 63290804 63291174 -187396680 + L2 LINE L2 2081 2475 -839 397 288 20 20 chr2 63292493 63292639 -187395215 + MIR SINE MIR 69 214 -48 383 233 55 103 chr2 63293145 63293291 -187394563 - MIR SINE MIR -18 244 106 23 0 0 0 chr2 63293390 63293413 -187394441 + AT_rich Low_complexity Low_complexity 1 23 0 204 179 0 0 chr2 63294733 63294772 -187393082 + (TA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 63294772 63294795 -187393059 + AT_rich Low_complexity Low_complexity 1 23 0 282 346 59 0 chr2 63294911 63295012 -187392842 - L2 LINE L2 -9 3263 3157 273 339 30 18 chr2 63295894 63296059 -187391795 + L2 LINE L2 2930 3096 -217 21 0 0 0 chr2 63296158 63296179 -187391675 + AT_rich Low_complexity Low_complexity 1 21 0 210 278 143 23 chr2 63296243 63296386 -187391468 + MIR SINE MIR 33 184 -61 210 291 0 45 chr2 63296478 63296588 -187391266 + CT-rich Low_complexity Low_complexity 1 105 0 654 117 0 0 chr2 63296652 63296772 -187391082 + (CA)n Simple_repeat Simple_repeat 1 120 0 816 200 122 69 chr2 63297817 63298062 -187389792 - MLT1A1 LTR MaLR -107 258 1 7058 195 94 42 chr2 63298062 63298116 -187389738 - MLT1A1-int LTR MaLR 0 1735 1685 2502 45 0 26 chr2 63298116 63298425 -187389429 + AluY SINE Alu 1 301 -10 7058 195 94 42 chr2 63298425 63299819 -187388035 - MLT1A1-int LTR MaLR -50 1685 189 6740 146 24 23 chr2 63299819 63301049 -187386805 - Tigger3b DNA MER2_type 0 1231 1 7058 195 94 42 chr2 63301049 63301249 -187386605 - MLT1A1-int LTR MaLR -1546 189 1 1185 246 58 30 chr2 63301249 63301578 -187386276 - MLT1A1 LTR MaLR 0 365 28 187 393 0 11 chr2 63301828 63301917 -187385937 - MIR SINE MIR -126 136 49 24 32 0 0 chr2 63302045 63302076 -187385778 + AT_rich Low_complexity Low_complexity 1 31 0 406 214 206 8 chr2 63302369 63302500 -187385354 - MER5A DNA MER1_type -7 182 26 285 312 50 45 chr2 63302498 63302700 -187385154 + L2 LINE L2 3085 3287 -26 * 513 300 78 0 chr2 63304680 63304860 -187382994 - MIR SINE MIR -61 201 8 218 81 27 0 chr2 63305027 63305064 -187382790 + (TTCA)n Simple_repeat Simple_repeat 2 39 0 810 314 76 33 chr2 63305070 63305528 -187382326 - L2 LINE L2 -1 3312 2835 2012 137 29 0 chr2 63305540 63305846 -187382008 + MER1B DNA MER1_type 2 316 -23 186 302 71 71 chr2 63306168 63306337 -187381517 + MIR SINE MIR 35 203 -59 2132 108 7 0 chr2 63306891 63307178 -187380676 - AluSc SINE Alu -20 289 1 858 302 38 40 chr2 63307189 63307698 -187380156 + L1ME3A LINE L1 5255 5764 -406 1507 208 57 16 chr2 63307698 63308068 -187379786 + MLT1B LTR MaLR 3 387 -3 858 302 38 40 chr2 63308068 63308240 -187379614 + L1ME3A LINE L1 5764 5935 -235 1669 223 8 14 chr2 63308560 63308927 -187378927 - MLT1A1 LTR MaLR 0 365 1 25 31 0 0 chr2 63309565 63309597 -187378257 + AT_rich Low_complexity Low_complexity 1 32 0 396 0 0 0 chr2 63311060 63311104 -187376750 + (T)n Simple_repeat Simple_repeat 1 44 0 321 355 114 11 chr2 63311834 63312096 -187375758 - L3 LINE CR1 -156 1421 1133 859 277 50 12 chr2 63312145 63312466 -187375388 - LTR16C LTR ERVL 0 491 159 22 0 0 0 chr2 63312753 63312775 -187375079 + AT_rich Low_complexity Low_complexity 1 22 0 361 216 45 27 chr2 63312908 63313019 -187374835 - Charlie8 DNA MER1_type -2213 204 92 256 360 45 11 chr2 63313896 63313985 -187373869 + MIR SINE MIR 17 108 -100 238 304 78 29 chr2 63314614 63314716 -187373138 - L2 LINE L2 -25 3288 3182 222 346 75 37 chr2 63315036 63315224 -187372630 - L2 LINE L2 -183 3089 2895 2255 129 28 6 chr2 63317480 63317836 -187370018 - THE1B LTR MaLR 0 364 1 1022 207 27 72 chr2 63317909 63318242 -187369612 + MLT1A2 LTR MaLR 1 318 -56 10432 94 0 1 chr2 63318242 63319797 -187368057 - L1PA7 LINE L1 -1277 4869 3317 6951 60 2 2 chr2 63319797 63321083 -187366771 + L1PA7 LINE L1 4882 6152 -2 267 211 0 0 chr2 63321114 63321171 -187366683 + MLT1A2 LTR MaLR 319 375 -15 216 238 0 119 chr2 63321545 63321646 -187366208 + L2 LINE L2 3162 3250 -63 331 240 16 50 chr2 63321824 63321945 -187365909 + L2 LINE L2 3028 3144 -169 234 0 0 0 chr2 63323806 63323832 -187364022 + (A)n Simple_repeat Simple_repeat 1 26 0 842 331 87 20 chr2 63325010 63325403 -187362451 - L2 LINE L2 -3 3310 2892 222 350 13 83 chr2 63325496 63325653 -187362201 + L2 LINE L2 3168 3313 0 487 302 56 17 chr2 63326508 63326687 -187361167 + L2 LINE L2 2614 2799 -515 244 188 87 43 chr2 63326688 63326757 -187361097 + L2 LINE L2 3242 3313 0 1899 281 62 7 chr2 63326948 63327513 -187360341 + L3 LINE CR1 597 1192 -385 985 146 0 76 chr2 63327839 63328024 -187359830 + FAM SINE Alu 1 171 -4 368 167 0 13 chr2 63328608 63328686 -187359168 + GA-rich Low_complexity Low_complexity 3 79 0 2493 67 3 10 chr2 63329845 63330157 -187357697 - AluY SINE Alu -1 310 1 634 316 68 42 chr2 63330849 63331522 -187356332 - L1M4 LINE L1 -1224 4922 4232 657 275 157 18 chr2 63331543 63332001 -187355853 - L1M4 LINE L1 -1960 4186 3665 334 269 34 24 chr2 63332201 63332409 -187355445 + L1ME LINE L1 5254 5463 -701 2369 109 0 0 chr2 63332694 63332997 -187354857 + AluSx SINE Alu 1 303 -9 240 258 0 43 chr2 63332997 63333090 -187354764 + L1ME LINE L1 5778 5866 -304 495 0 0 0 chr2 63333273 63333328 -187354526 + (TA)n Simple_repeat Simple_repeat 1 55 0 2190 113 0 0 chr2 63333807 63334100 -187353754 + AluSx SINE Alu 1 293 -19 243 206 10 21 chr2 63334261 63334358 -187353496 + CT-rich Low_complexity Low_complexity 4 99 0 1388 183 32 23 chr2 63335988 63336471 -187351383 - L1M4 LINE L1 -618 5566 5076 * 2681 191 127 5 chr2 63336460 63337124 -187350730 + L1PB1 LINE L1 419 1163 -5700 13065 204 17 18 chr2 63337146 63342432 -187345422 + L1PB1 LINE L1 1364 6682 -185 2008 193 91 6 chr2 63342482 63342871 -187344983 - L1M2 LINE L1 -502 5789 5435 383 38 19 0 chr2 63342871 63342924 -187344930 + (TA)n Simple_repeat Simple_repeat 2 55 0 2008 193 91 6 chr2 63342924 63343276 -187344578 - L1M2 LINE L1 -856 5435 4980 23 0 0 0 chr2 63343276 63343299 -187344555 + AT_rich Low_complexity Low_complexity 1 23 0 5369 167 33 6 chr2 63343302 63343666 -187344188 - L1PB1 LINE L1 -2 6149 5796 234 91 0 0 chr2 63343666 63343699 -187344155 + (TA)n Simple_repeat Simple_repeat 1 33 0 5369 167 33 6 chr2 63343699 63345055 -187342799 - L1PB1 LINE L1 -355 5796 4384 220 341 12 12 chr2 63345059 63345141 -187342713 + MIR SINE MIR 169 250 -12 197 98 24 0 chr2 63345438 63345479 -187342375 + (TTTTTG)n Simple_repeat Simple_repeat 4 45 0 22 35 0 0 chr2 63346704 63346733 -187341121 + AT_rich Low_complexity Low_complexity 1 29 0 1110 84 0 0 chr2 63347669 63347838 -187340016 - AluSg/x SINE Alu 0 337 169 1197 236 8 8 chr2 63347857 63348098 -187339756 - MIR SINE MIR -12 250 10 225 132 0 0 chr2 63348684 63348722 -187339132 + (CAA)n Simple_repeat Simple_repeat 1 38 0 746 292 89 10 chr2 63349291 63349582 -187338272 - L3b LINE CR1 -156 1427 1114 291 28 0 0 chr2 63349926 63349962 -187337892 + (TG)n Simple_repeat Simple_repeat 2 37 0 250 287 21 11 chr2 63349963 63350057 -187337797 + MER117 DNA MER1_type 30 124 -73 224 331 73 15 chr2 63350346 63350482 -187337372 + L2 LINE L2 2556 2699 -615 237 377 81 2 chr2 63354969 63355110 -187332744 + MIR3 SINE MIR 3 150 -74 1464 174 20 87 chr2 63355336 63355727 -187332127 + MLT1B LTR MaLR 23 387 -3 318 169 0 0 chr2 63356457 63356522 -187331332 + CT-rich Low_complexity Low_complexity 2 66 0 315 71 0 0 chr2 63356522 63356564 -187331290 + (CA)n Simple_repeat Simple_repeat 1 42 0 195 42 0 0 chr2 63357724 63357748 -187330106 + (T)n Simple_repeat Simple_repeat 1 24 0 333 0 0 0 chr2 63357801 63357838 -187330016 + (TG)n Simple_repeat Simple_repeat 2 38 0 483 18 0 0 chr2 63359497 63359553 -187328301 + (TG)n Simple_repeat Simple_repeat 2 57 0 261 327 56 37 chr2 63361101 63361208 -187326646 - L2 LINE L2 -14 3258 3150 654 219 70 74 chr2 63361211 63361426 -187326428 + MER20 DNA MER1_type 2 215 -4 183 42 0 0 chr2 63363974 63363998 -187323856 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1396 202 95 0 chr2 63364004 63364257 -187323597 - AluJo SINE Alu -30 282 6 21 0 0 0 chr2 63364363 63364384 -187323470 + AT_rich Low_complexity Low_complexity 1 21 0 1483 226 19 25 chr2 63365333 63365700 -187322154 + MLT1A1 LTR MaLR 1 365 0 971 65 0 8 chr2 63366282 63366429 -187321425 - AluY SINE Alu 0 305 160 288 0 0 0 chr2 63366511 63366543 -187321311 + (CA)n Simple_repeat Simple_repeat 2 33 0 738 363 124 0 chr2 63367787 63368222 -187319632 - L3 LINE CR1 -1 1576 1088 21 36 0 0 chr2 63369595 63369623 -187318231 + AT_rich Low_complexity Low_complexity 1 28 0 1438 191 107 14 chr2 63370183 63370538 -187317316 - MLT1B LTR MaLR -2 388 1 21 57 0 0 chr2 63373234 63373269 -187314585 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr2 63373295 63373319 -187314535 + AT_rich Low_complexity Low_complexity 1 24 0 7570 26 3 0 chr2 63373597 63374491 -187313363 - L1PA3 LINE L1 0 6155 5259 788 179 10 46 chr2 63374483 63374679 -187313175 - L1M4 LINE L1 -5293 1249 1061 * 37 23 0 0 chr2 63374680 63374724 -187313130 + AT_rich Low_complexity Low_complexity 1 44 0 435 194 0 0 chr2 63374724 63374817 -187313037 - L1MA9 LINE L1 -22 6290 6198 614 159 0 0 chr2 63374836 63374924 -187312930 - U6 snRNA snRNA -19 88 1 2911 245 57 49 chr2 63374940 63375547 -187312307 - L1M4 LINE L1 -5510 1032 412 273 29 0 0 chr2 63375547 63375581 -187312273 + (TAA)n Simple_repeat Simple_repeat 3 36 0 2911 245 57 49 chr2 63375581 63375997 -187311857 - L1M4 LINE L1 -6130 412 1 2550 246 60 46 chr2 63375993 63376856 -187310998 + L1MC4a LINE L1 1720 2569 -3857 * 1749 144 202 17 chr2 63376856 63377217 -187310637 - MSTA LTR MaLR 0 428 1 2550 246 60 46 chr2 63377217 63377999 -187309855 + L1MC4a LINE L1 2569 3441 -2985 1385 178 63 53 chr2 63378011 63378314 -187309540 + AluJo SINE Alu 5 310 -2 43 20 0 0 chr2 63378475 63378525 -187309329 + AT_rich Low_complexity Low_complexity 1 50 0 373 296 167 9 chr2 63378736 63379372 -187308482 + L1ME3A LINE L1 1047 1870 -4512 2871 275 73 63 chr2 63379629 63381102 -187306752 + L1ME3A LINE L1 2200 3674 -2708 1838 119 8 0 chr2 63381102 63381353 -187306501 + AluSx SINE Alu 40 292 -20 2871 275 73 63 chr2 63381353 63382770 -187305084 + L1ME3A LINE L1 3674 5075 -1307 7482 33 0 0 chr2 63382793 63383783 -187304071 - L1PA4 LINE L1 -3 6152 5162 5602 31 1 0 chr2 63383783 63384459 -187303395 + L1PA4 LINE L1 4486 5162 -984 268 273 65 39 chr2 63384462 63384621 -187303233 + L1ME3A LINE L1 5089 5251 -1131 1338 279 122 36 chr2 63384627 63385430 -187302424 + L1ME3A LINE L1 5535 6406 0 225 281 70 18 chr2 63385733 63385904 -187301950 + L1MC4a LINE L1 4053 4232 -2194 392 333 26 39 chr2 63386419 63386793 -187301061 + L1MC4a LINE L1 5792 5938 -508 1031 337 45 35 chr2 63389567 63390078 -187297776 + L3 LINE CR1 1061 1576 -1 5338 134 27 13 chr2 63390150 63391098 -187296756 + L1PA16 LINE L1 5193 6154 -12 200 143 36 36 chr2 63391224 63391280 -187296574 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 1118 264 100 17 chr2 63392639 63393158 -187294696 - L1ME3A LINE L1 -36 6528 5967 401 304 64 42 chr2 63393160 63393443 -187294411 - L1ME3A LINE L1 -4233 2488 2200 592 271 80 29 chr2 63393478 63394020 -187293834 - L1MDa LINE L1 -4474 2066 1488 235 250 68 45 chr2 63395733 63395821 -187292033 + MIR SINE MIR 64 153 -109 212 86 29 0 chr2 63396698 63396733 -187291121 + (TGGA)n Simple_repeat Simple_repeat 2 37 0 464 332 81 27 chr2 63396831 63397054 -187290800 - MIR SINE MIR -14 248 14 479 238 329 6 chr2 63397180 63397344 -187290510 - MIR SINE MIR -44 218 2 548 277 0 7 chr2 63398815 63398956 -187288898 + MIR3 SINE MIR 54 193 -15 1925 172 7 0 chr2 63400388 63400696 -187287158 - AluJb SINE Alu -2 310 1 207 0 0 0 chr2 63400758 63400781 -187287073 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 296 289 77 98 chr2 63401680 63401874 -187285980 - MLT1L LTR MaLR -225 390 201 336 348 61 18 chr2 63402074 63402238 -187285616 + MIR3 SINE MIR 35 205 -3 5803 241 28 32 chr2 63404373 63406056 -187281798 + L1MB7 LINE L1 16 1667 -4875 1900 144 71 11 chr2 63406057 63406411 -187281443 + THE1C LTR MaLR 1 375 0 2175 126 28 28 chr2 63406422 63406786 -187281068 + THE1B LTR MaLR 1 364 0 11103 96 40 0 chr2 63406787 63408306 -187279548 + THE1B-int LTR MaLR 2 1580 0 2190 119 22 38 chr2 63408306 63408676 -187279178 + THE1B LTR MaLR 1 364 0 2472 260 122 17 chr2 63408676 63410342 -187277512 + L1MB7 LINE L1 1680 3530 -3114 4685 127 16 9 chr2 63410344 63411483 -187276371 + L1PA13 LINE L1 4902 6161 -2 479 255 64 0 chr2 63411520 63411755 -187276099 + L1MB7 LINE L1 3583 3832 -2812 969 265 56 14 chr2 63411759 63412245 -187275609 - L1MB7 LINE L1 -2416 4228 3723 2996 233 65 17 chr2 63412251 63413240 -187274614 + L1MB7 LINE L1 4234 5269 -1375 1380 197 76 20 chr2 63413240 63413595 -187274259 - THE1C LTR MaLR 0 375 1 9303 135 19 34 chr2 63413595 63415198 -187272656 - THE1C-int LTR MaLR 0 1580 3 1497 138 167 6 chr2 63415200 63415512 -187272342 - THE1C LTR MaLR 0 375 14 1388 247 44 19 chr2 63415548 63416067 -187271787 + L1MB7 LINE L1 5265 5796 -848 1829 184 7 7 chr2 63416090 63416394 -187271460 + AluJb SINE Alu 4 307 -5 3224 201 42 5 chr2 63416427 63417206 -187270648 + L1MB7 LINE L1 5875 6682 0 246 343 78 0 chr2 63417654 63417756 -187270098 + L2 LINE L2 3147 3256 -16 818 311 83 40 chr2 63417884 63418702 -187269152 + L1ME2 LINE L1 36 888 -5508 335 241 6 31 chr2 63419038 63419200 -187268654 + L1ME2 LINE L1 970 1127 -5269 27 29 0 0 chr2 63419215 63419249 -187268605 + AT_rich Low_complexity Low_complexity 1 34 0 774 254 19 0 chr2 63419304 63419560 -187268294 + L1ME2 LINE L1 2635 2895 -3320 314 213 62 38 chr2 63419778 63419797 -187268057 + L1ME2 LINE L1 2909 2926 -3289 3245 133 6 4 chr2 63419797 63420293 -187267561 - LOR1a LTR ERV1 0 497 1 314 213 62 38 chr2 63420293 63420433 -187267421 + L1ME2 LINE L1 2926 3072 -3143 * 2210 221 66 19 chr2 63420430 63421095 -187266759 + L1ME2 LINE L1 5398 6093 -140 1725 149 55 0 chr2 63421276 63421531 -187266323 + AluJo SINE Alu 3 271 -41 22 35 0 0 chr2 63421823 63421852 -187266002 + AT_rich Low_complexity Low_complexity 1 29 0 400 157 67 11 chr2 63422490 63422579 -187265275 + MER53 DNA DNA 93 186 -3 275 308 92 17 chr2 63422579 63422699 -187265155 - MIR3 SINE MIR -48 160 32 478 273 27 13 chr2 63422867 63423017 -187264837 + MIR SINE MIR 107 258 -4 407 325 158 25 chr2 63423269 63423671 -187264183 + L2 LINE L2 2763 3214 -99 1584 135 69 82 chr2 63423920 63424299 -187263555 + THE1C LTR MaLR 1 374 -1 935 242 79 105 chr2 63425933 63426504 -187261350 + LTR67 LTR ERVL 2 557 0 1194 259 111 15 chr2 63426538 63427046 -187260808 - MLT1E LTR MaLR 0 593 1 245 335 123 56 chr2 63428070 63428533 -187259321 + L2 LINE L2 1611 2104 -1210 312 296 125 35 chr2 63428852 63429163 -187258691 - L1ME3A LINE L1 -282 5888 5550 404 0 0 18 chr2 63429167 63429223 -187258631 - L1PA2 LINE L1 -2 6153 6099 2975 161 0 10 chr2 63429403 63429905 -187257949 - LOR1a LTR ERV1 0 497 1 180 0 0 0 chr2 63430259 63430279 -187257575 + (TATAA)n Simple_repeat Simple_repeat 5 24 0 189 89 67 0 chr2 63430398 63430443 -187257411 + CT-rich Low_complexity Low_complexity 5 52 0 27 49 0 0 chr2 63431042 63431083 -187256771 + AT_rich Low_complexity Low_complexity 1 41 0 26 64 0 0 chr2 63431207 63431254 -187256600 + AT_rich Low_complexity Low_complexity 1 47 0 224 163 47 0 chr2 63431390 63431433 -187256421 - MIR SINE MIR -71 137 93 21 36 0 0 chr2 63432036 63432064 -187255790 + AT_rich Low_complexity Low_complexity 1 28 0 204 67 0 0 chr2 63432078 63432108 -187255746 + (TATAA)n Simple_repeat Simple_repeat 5 34 0 218 211 0 0 chr2 63432227 63432265 -187255589 + polypyrimidine Low_complexity Low_complexity 1 38 0 23 33 0 0 chr2 63432706 63432736 -187255118 + AT_rich Low_complexity Low_complexity 1 30 0 212 328 0 0 chr2 63434522 63434583 -187253271 + CT-rich Low_complexity Low_complexity 1 61 0 376 321 83 28 chr2 63437621 63437839 -187250015 - MIR SINE MIR 0 262 33 664 251 42 39 chr2 63437845 63438038 -187249816 + MIR SINE MIR 38 230 -32 1803 105 4 0 chr2 63438592 63438831 -187249023 + AluSp SINE Alu 67 306 -7 417 283 176 24 chr2 63439646 63439851 -187248003 - MIR SINE MIR -17 245 10 2102 114 0 0 chr2 63439993 63440316 -187247538 - AluSg1 SINE Alu 0 323 1 22 0 0 0 chr2 63440540 63440562 -187247292 + AT_rich Low_complexity Low_complexity 1 22 0 2083 101 10 0 chr2 63441543 63441849 -187246005 - L1PA15 LINE L1 -8 6157 5849 499 111 0 0 chr2 63442503 63442575 -187245279 - AluY SINE Alu -14 295 224 1100 129 6 6 chr2 63442575 63442738 -187245116 - AluY SINE Alu -148 163 1 401 284 169 6 chr2 63442801 63442984 -187244870 - LTR33 LTR ERVL -308 213 1 326 278 33 11 chr2 63444636 63444726 -187243128 - MIR SINE MIR 0 262 171 243 415 52 0 chr2 63444899 63445034 -187242820 + MIR3 SINE MIR 44 185 -23 698 203 52 0 chr2 63445963 63446116 -187241738 + MLT1J2 LTR MaLR 1 161 -289 261 311 22 7 chr2 63446157 63446292 -187241562 + MER103 DNA DNA 14 150 -16 403 60 0 0 chr2 63446336 63446386 -187241468 - AluSp SINE Alu -197 116 67 190 338 14 58 chr2 63446461 63446600 -187241254 - L3 LINE CR1 -761 816 684 218 325 24 24 chr2 63446677 63446760 -187241094 - L3 LINE CR1 -900 677 595 826 344 123 30 chr2 63446768 63447769 -187240085 + L2 LINE L2 2220 3313 0 1971 151 3 3 chr2 63447863 63448154 -187239700 - AluSx SINE Alu -21 291 1 578 158 79 0 chr2 63449435 63449536 -187238318 - FLAM_C SINE Alu -34 109 1 520 174 16 8 chr2 63451371 63451492 -187236362 + CT-rich Low_complexity Low_complexity 4 125 0 194 272 0 12 chr2 63451515 63451596 -187236258 + CT-rich Low_complexity Low_complexity 1 80 0 200 294 47 24 chr2 63452745 63452830 -187235024 + L2 LINE L2 2774 2860 -454 243 61 0 0 chr2 63454831 63454864 -187232990 + (CA)n Simple_repeat Simple_repeat 1 33 0 23 0 0 0 chr2 63455483 63455506 -187232348 + AT_rich Low_complexity Low_complexity 1 23 0 207 279 0 44 chr2 63455594 63455662 -187232192 + (CATATA)n Simple_repeat Simple_repeat 5 69 0 180 0 0 0 chr2 63455841 63455861 -187231993 + (TGAA)n Simple_repeat Simple_repeat 4 23 0 422 122 0 14 chr2 63456632 63456706 -187231148 + MADE1 DNA Mariner 6 78 -2 270 95 0 0 chr2 63457048 63457090 -187230764 + (GA)n Simple_repeat Simple_repeat 2 43 0 22 0 0 0 chr2 63459190 63459212 -187228642 + AT_rich Low_complexity Low_complexity 1 22 0 188 351 13 13 chr2 63459416 63459493 -187228361 + L2 LINE L2 3234 3310 -3 275 194 28 130 chr2 63459529 63459591 -187228263 - MER5B DNA MER1_type -1 177 129 2185 140 0 0 chr2 63459591 63459899 -187227955 + AluSx SINE Alu 1 308 -4 275 194 28 130 chr2 63459899 63459944 -187227910 - MER5B DNA MER1_type -49 129 81 391 340 46 48 chr2 63459960 63460589 -187227265 - L2 LINE L2 -164 3108 2486 196 335 99 20 chr2 63461379 63461531 -187226323 - MIR3 SINE MIR -21 187 24 450 257 83 7 chr2 63462148 63462292 -187225562 + MIR SINE MIR 2 156 -106 28 48 0 0 chr2 63462303 63462345 -187225509 + AT_rich Low_complexity Low_complexity 1 42 0 197 244 81 12 chr2 63462349 63462435 -187225419 + MIR SINE MIR 170 261 -1 21 0 0 0 chr2 63463424 63463445 -187224409 + AT_rich Low_complexity Low_complexity 1 21 0 224 200 15 0 chr2 63464609 63464674 -187223180 + CT-rich Low_complexity Low_complexity 6 71 0 435 301 92 40 chr2 63466104 63466336 -187221518 - MIR SINE MIR 0 262 19 361 256 155 0 chr2 63467523 63467652 -187220202 + MIR SINE MIR 108 256 -6 277 324 88 74 chr2 63467811 63468174 -187219680 - L2 LINE L2 -33 3239 2850 191 36 36 0 chr2 63468174 63468202 -187219652 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 277 324 88 74 chr2 63468202 63468451 -187219403 - L2 LINE L2 -422 2850 2606 180 0 0 0 chr2 63470179 63470199 -187217655 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 340 250 0 0 chr2 63470565 63470645 -187217209 - MER116 DNA Mariner 0 80 1 903 103 0 0 chr2 63470757 63470873 -187216981 + AluSg/x SINE Alu 179 294 -18 610 314 11 11 chr2 63471197 63471382 -187216472 - MIR SINE MIR 0 262 78 348 160 27 27 chr2 63471542 63471617 -187216237 - MER5A DNA MER1_type -106 83 9 802 230 5 42 chr2 63472773 63472964 -187214890 - MIR3 SINE MIR -5 203 20 197 329 123 40 chr2 63473627 63473904 -187213950 - L2 LINE L2 -51 3221 2922 479 260 7 27 chr2 63475001 63475147 -187212707 + MIR SINE MIR 111 253 -9 914 228 11 0 chr2 63476128 63476317 -187211537 + MER82 DNA MER2_type 1 191 -462 633 189 0 0 chr2 63477378 63477484 -187210370 + Tigger3(Golem) DNA MER2_type 3 108 -2921 2889 101 34 240 chr2 63477484 63478422 -187209432 + Tigger3(Golem) DNA MER2_type 2285 3029 0 287 242 209 0 chr2 63480858 63480949 -187206905 - MER58B DNA MER1_type -3 338 229 2295 106 70 22 chr2 63481630 63481988 -187205866 + THE1C LTR MaLR 1 375 0 11089 114 35 5 chr2 63481988 63483522 -187204332 + THE1C-int LTR MaLR 1 1580 0 2686 114 11 19 chr2 63483522 63483900 -187203954 + THE1C LTR MaLR 1 375 0 486 229 7 64 chr2 63485297 63485437 -187202417 - MIR SINE MIR -45 217 86 322 265 124 38 chr2 63486008 63486193 -187201661 + MIR SINE MIR 32 232 -30 1751 257 56 5 chr2 63486633 63487061 -187200793 + MLT1J2 LTR MaLR 1 450 0 738 225 42 33 chr2 63487422 63487635 -187200219 - MER20 DNA MER1_type -2 217 3 318 307 9 35 chr2 63488517 63488631 -187199223 - MER81 DNA DNA -1 113 3 422 307 42 18 chr2 63488771 63488937 -187198917 + MIR SINE MIR 49 218 -44 772 245 133 30 chr2 63489098 63489400 -187198454 + L2 LINE L2 1935 2267 -1047 264 250 50 12 chr2 63489414 63489494 -187198360 - L1ME LINE L1 -601 5561 5479 258 268 70 0 chr2 63490117 63490188 -187197666 + MIR SINE MIR 74 149 -59 1046 103 0 4 chr2 63490769 63491031 -187196823 + (TCTA)n Simple_repeat Simple_repeat 1 261 0 482 245 106 13 chr2 63491830 63491981 -187195873 + MIR SINE MIR 48 212 -50 25 0 0 0 chr2 63493323 63493348 -187194506 + AT_rich Low_complexity Low_complexity 1 25 0 225 91 39 156 chr2 63493569 63493646 -187194208 + LTR13 LTR ERVK 648 715 -292 1944 132 28 11 chr2 63495612 63495899 -187191955 - AluSx SINE Alu -10 302 11 279 326 124 8 chr2 63496734 63496863 -187190991 - MER117 DNA MER1_type -52 145 2 232 324 0 0 chr2 63496994 63497065 -187190789 - L2 LINE L2 0 3272 3202 278 247 194 11 chr2 63497584 63497677 -187190177 + L2 LINE L2 3158 3267 -5 197 333 0 13 chr2 63497732 63497807 -187190047 + L2 LINE L2 3194 3267 -5 610 261 126 43 chr2 63497945 63498175 -187189679 - MLT1J2 LTR MaLR 0 450 202 590 62 102 0 chr2 63499490 63499784 -187188070 + (TA)n Simple_repeat Simple_repeat 1 323 0 569 71 67 21 chr2 63499795 63500042 -187187812 + (TA)n Simple_repeat Simple_repeat 1 258 0 969 130 106 48 chr2 63500823 63501030 -187186824 + MER20 DNA MER1_type 1 219 0 21 0 0 0 chr2 63501918 63501939 -187185915 + AT_rich Low_complexity Low_complexity 1 21 0 1553 148 40 46 chr2 63502648 63502972 -187184882 + MER33 DNA MER1_type 3 324 0 217 230 68 54 chr2 63503294 63503368 -187184486 - MER91C DNA MER1_type -30 110 36 357 292 71 24 chr2 63504031 63504199 -187183655 + L1MC/D LINE L1 5485 5660 -461 2677 98 25 3 chr2 63504204 63504560 -187183294 - THE1B LTR MaLR 0 364 1 616 27 0 0 chr2 63504746 63504820 -187183034 + L1PA2 LINE L1 6078 6151 -4 2093 129 6 0 chr2 63504846 63505157 -187182697 - AluSp SINE Alu 0 313 1 606 293 41 37 chr2 63505213 63505283 -187182571 - MIR SINE MIR -11 251 183 2968 9 0 0 chr2 63505283 63505601 -187182253 - AluYb8 SINE Alu 0 318 1 606 293 41 37 chr2 63505601 63505772 -187182082 - MIR SINE MIR -79 183 9 263 216 0 31 chr2 63507653 63507750 -187180104 + GA-rich Low_complexity Low_complexity 4 97 0 303 291 0 23 chr2 63509131 63509217 -187178637 + GA-rich Low_complexity Low_complexity 6 89 0 516 341 22 13 chr2 63509218 63509447 -187178407 - MIR SINE MIR -24 238 8 394 339 85 0 chr2 63509559 63509748 -187178106 - MIR SINE MIR -33 229 25 249 159 0 0 chr2 63510291 63510335 -187177519 + T-rich Low_complexity Low_complexity 1 44 0 225 261 15 15 chr2 63510526 63510591 -187177263 - L2 LINE L2 -58 3255 3191 727 45 0 0 chr2 63511741 63511830 -187176024 - L1PA2 LINE L1 -1121 5025 4937 * 7610 20 0 0 chr2 63511828 63512945 -187174909 + L1PA2 LINE L1 5039 6155 0 208 158 0 26 chr2 63514761 63514799 -187173055 + CT-rich Low_complexity Low_complexity 4 40 0 192 77 0 0 chr2 63516276 63516302 -187171552 + (TTC)n Simple_repeat Simple_repeat 2 27 0 390 229 139 33 chr2 63517306 63517428 -187170426 + MIR SINE MIR 20 154 -108 271 317 19 0 chr2 63517497 63517601 -187170253 + (CTA)n Simple_repeat Simple_repeat 2 107 0 225 312 121 57 chr2 63517682 63517839 -187170015 + MIR3 SINE MIR 13 179 -29 22 0 0 0 chr2 63517923 63517945 -187169909 + AT_rich Low_complexity Low_complexity 1 22 0 190 256 0 0 chr2 63517966 63518009 -187169845 + MIR3 SINE MIR 151 193 -15 22 35 0 0 chr2 63519725 63519754 -187168100 + AT_rich Low_complexity Low_complexity 1 29 0 698 224 6 0 chr2 63520248 63520413 -187167441 - L1MA10 LINE L1 0 6334 6169 227 333 63 24 chr2 63521388 63521514 -187166340 - L2 LINE L2 -1 3271 3141 21 0 0 0 chr2 63521979 63522000 -187165854 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 63522269 63522300 -187165554 + AT_rich Low_complexity Low_complexity 1 31 0 206 269 19 0 chr2 63522879 63522931 -187164923 - L2 LINE L2 0 3313 3261 233 277 148 10 chr2 63523187 63523288 -187164566 - MER103 DNA DNA -50 116 2 315 0 0 0 chr2 63523501 63523536 -187164318 + (TG)n Simple_repeat Simple_repeat 2 36 0 226 240 0 20 chr2 63523537 63523587 -187164267 + (CATA)n Simple_repeat Simple_repeat 2 50 0 319 219 27 9 chr2 63525990 63526128 -187161726 + MER96 DNA MER1_type? 4 175 0 220 233 0 0 chr2 63526132 63526175 -187161679 + L2 LINE L2 3216 3258 -14 793 168 56 0 chr2 63526828 63526971 -187160883 + Tigger3(Golem) DNA MER2_type 2878 3028 -1 402 116 105 23 chr2 63526983 63527069 -187160785 + L1MA9 LINE L1 6219 6311 -1 222 330 80 18 chr2 63527374 63527486 -187160368 - MIR SINE MIR -72 190 72 181 293 120 0 chr2 63529489 63529564 -187158290 + MIR SINE MIR 63 146 -116 247 288 39 33 chr2 63530705 63530858 -187156996 - L1ME LINE L1 -254 5867 5712 277 368 93 62 chr2 63531250 63531571 -187156283 - L2 LINE L2 -61 3211 2881 220 374 114 44 chr2 63531691 63531988 -187155866 - L2 LINE L2 -568 2746 2429 209 323 32 43 chr2 63532333 63532426 -187155428 - MIR SINE MIR -148 114 23 322 320 32 16 chr2 63533069 63533194 -187154660 - MIR SINE MIR -113 149 23 212 196 18 0 chr2 63533235 63533291 -187154563 + (CAAA)n Simple_repeat Simple_repeat 3 59 0 1226 172 40 96 chr2 63533910 63534076 -187153778 - MER58B DNA MER1_type -2085 335 161 2169 113 3 13 chr2 63534076 63534376 -187153478 + AluSq SINE Alu 1 297 -16 225 0 100 0 chr2 63534383 63534423 -187153431 + A-rich Low_complexity Low_complexity 2 45 0 1226 172 40 96 chr2 63534423 63534602 -187153252 - MER58B DNA MER1_type -2265 155 2 1353 126 37 0 chr2 63535349 63535564 -187152290 + MER30 DNA MER1_type 1 223 -7 2232 107 0 7 chr2 63535954 63536263 -187151591 - AluSc SINE Alu -2 307 1 216 0 0 0 chr2 63536745 63536769 -187151085 + (T)n Simple_repeat Simple_repeat 1 24 0 283 138 15 15 chr2 63537545 63537610 -187150244 + GA-rich Low_complexity Low_complexity 2 66 0 192 77 0 0 chr2 63537923 63537949 -187149905 + (A)n Simple_repeat Simple_repeat 1 26 0 859 273 50 33 chr2 63541529 63541866 -187145988 + MLT1K LTR MaLR 141 483 -105 440 257 76 9 chr2 63542267 63542372 -187145482 - L2 LINE L2 -3 3269 3158 2011 101 15 61 chr2 63542582 63542908 -187144946 - AluSx SINE Alu -1 311 1 2025 129 14 0 chr2 63542931 63543218 -187144636 - AluSx SINE Alu -21 291 1 219 254 0 0 chr2 63543313 63543372 -187144482 + A-rich Low_complexity Low_complexity 1 59 0 454 266 80 21 chr2 63543605 63543793 -187144061 + MIR SINE MIR 34 232 -30 1797 206 113 14 chr2 63543793 63544406 -187143448 + L1MC4 LINE L1 7126 7808 0 216 214 0 0 chr2 63547135 63547191 -187140663 + GA-rich Low_complexity Low_complexity 5 60 0 494 164 261 15 chr2 63547606 63547740 -187140114 + MER58A DNA MER1_type 46 212 -12 349 327 152 5 chr2 63548534 63548751 -187139103 + MIR SINE MIR 2 250 -12 22 0 0 0 chr2 63549345 63549367 -187138487 + AT_rich Low_complexity Low_complexity 1 22 0 2952 226 24 41 chr2 63549421 63550292 -187137562 - L1ME1 LINE L1 -4 6162 5307 1160 285 57 42 chr2 63550532 63551005 -187136849 + L2 LINE L2 2814 3293 -20 418 164 0 19 chr2 63551605 63551709 -187136145 - L1MA3 LINE L1 0 6305 6204 275 269 11 11 chr2 63553107 63553200 -187134654 + GA-rich Low_complexity Low_complexity 1 93 0 201 238 0 48 chr2 63554863 63554926 -187132928 + CT-rich Low_complexity Low_complexity 2 61 0 1369 297 180 29 chr2 63555037 63555970 -187131884 + L2 LINE L2 2227 3310 -3 2245 116 7 3 chr2 63555982 63556283 -187131571 - AluSx SINE Alu -10 302 1 2280 109 3 0 chr2 63556346 63556650 -187131204 + AluSp SINE Alu 1 305 -8 201 213 0 0 chr2 63559427 63559474 -187128380 + (CA)n Simple_repeat Simple_repeat 2 48 0 382 204 14 63 chr2 63559614 63559756 -187128098 - L1ME4a LINE L1 -4 6117 5983 302 132 53 0 chr2 63559938 63560014 -187127840 + (TCCA)n Simple_repeat Simple_repeat 3 82 0 1992 115 7 28 chr2 63560111 63560310 -187127544 - AluSc SINE Alu 0 312 120 180 0 0 0 chr2 63560310 63560330 -187127524 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1992 115 7 28 chr2 63560330 63560448 -187127406 - AluSc SINE Alu -192 120 1 443 315 96 6 chr2 63561098 63561276 -187126578 + MIR SINE MIR 25 218 -44 378 0 0 0 chr2 63561908 63561950 -187125904 + (CA)n Simple_repeat Simple_repeat 2 43 0 339 248 38 67 chr2 63562109 63562214 -187125640 - L2 LINE L2 -2 3270 3169 387 0 0 0 chr2 63562759 63562802 -187125052 + (TA)n Simple_repeat Simple_repeat 1 43 0 309 100 0 0 chr2 63565425 63565475 -187122379 + (CA)n Simple_repeat Simple_repeat 2 51 0 372 22 0 0 chr2 63567418 63567463 -187120391 + (TG)n Simple_repeat Simple_repeat 1 45 0 394 318 0 0 chr2 63567828 63567935 -187119919 - MIR3 SINE MIR -29 179 73 230 434 0 0 chr2 63568253 63568375 -187119479 - MER5A DNA MER1_type -5 184 63 387 0 0 0 chr2 63568479 63568522 -187119332 + (TG)n Simple_repeat Simple_repeat 2 44 0 301 306 45 35 chr2 63568712 63568911 -187118943 - L2 LINE L2 -420 2894 2694 515 318 50 5 chr2 63570201 63570399 -187117455 - MIR SINE MIR -7 255 49 577 316 119 46 chr2 63570512 63571336 -187116518 + L1ME4a LINE L1 4458 5341 -805 512 308 64 20 chr2 63571479 63571869 -187115985 + L1ME4a LINE L1 5500 5906 -215 186 246 0 0 chr2 63571895 63571956 -187115898 + (TA)n Simple_repeat Simple_repeat 2 62 0 41 0 0 0 chr2 63572060 63572101 -187115753 + AT_rich Low_complexity Low_complexity 1 41 0 918 291 46 28 chr2 63574013 63574405 -187113449 - MLT1I LTR MaLR 0 409 11 1983 201 36 40 chr2 63574415 63574917 -187112937 - MLT1D LTR MaLR -3 502 3 332 294 105 7 chr2 63574927 63575070 -187112784 + MIR SINE MIR 48 204 -58 240 35 0 0 chr2 63575128 63575157 -187112697 + (TG)n Simple_repeat Simple_repeat 2 30 0 408 281 67 34 chr2 63575270 63575448 -187112406 - MER5A DNA MER1_type -2 187 4 1638 173 4 22 chr2 63575672 63575950 -187111904 + AluJb SINE Alu 1 273 -39 255 289 16 76 chr2 63575980 63576295 -187111559 + HAL1 LINE L1 968 1263 -1244 237 336 18 9 chr2 63576474 63576587 -187111267 + HAL1 LINE L1 1452 1565 -942 213 231 0 0 chr2 63577069 63577121 -187110733 + A-rich Low_complexity Low_complexity 1 52 0 208 231 0 19 chr2 63577238 63577290 -187110564 + (ATG)n Simple_repeat Simple_repeat 2 52 0 706 328 43 69 chr2 63577290 63577958 -187109896 + L1M4 LINE L1 2217 2867 -3279 1642 176 9 26 chr2 63578005 63578346 -187109508 + L1MB1 LINE L1 5833 6167 -1 571 363 78 28 chr2 63578358 63578934 -187108920 + L1M4 LINE L1 3329 3933 -2213 200 59 29 0 chr2 63579054 63579088 -187108766 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 493 71 0 0 chr2 63579360 63579430 -187108424 - Alu SINE Alu -8 304 235 2503 65 3 0 chr2 63579447 63579754 -187108100 - AluY SINE Alu -3 308 1 201 39 0 0 chr2 63581033 63581059 -187106795 + (T)n Simple_repeat Simple_repeat 1 26 0 322 304 124 32 chr2 63581059 63581431 -187106423 - LTR16A LTR ERVL -22 428 23 240 236 38 28 chr2 63582650 63582756 -187105098 - MER103 DNA DNA -7 159 53 204 277 0 0 chr2 63583038 63583085 -187104769 + C-rich Low_complexity Low_complexity 5 51 0 186 237 0 0 chr2 63583200 63583238 -187104616 + MIR SINE MIR 216 253 -9 2247 111 7 3 chr2 63583386 63583693 -187104161 + AluSx SINE Alu 3 310 -2 396 103 0 0 chr2 63584315 63584373 -187103481 + (TAGA)n Simple_repeat Simple_repeat 3 60 0 210 397 38 30 chr2 63584808 63585045 -187102809 - L2 LINE L2 -208 3064 2826 1848 168 14 3 chr2 63587312 63587598 -187100256 + AluSx SINE Alu 1 289 -23 278 81 0 0 chr2 63587598 63587635 -187100219 + (GA)n Simple_repeat Simple_repeat 1 37 0 480 91 34 11 chr2 63587635 63587723 -187100131 + GA-rich Low_complexity Low_complexity 4 93 0 865 184 36 5 chr2 63591683 63591879 -187095975 - L1MB4 LINE L1 -4 6176 5975 2183 102 0 3 chr2 63592783 63593123 -187094731 + AluSx SINE Alu 1 339 0 250 255 0 0 chr2 63593341 63593392 -187094462 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 217 303 49 79 chr2 63594236 63594416 -187093438 + MIR SINE MIR 16 190 -62 399 21 0 0 chr2 63594804 63594852 -187093002 + (CA)n Simple_repeat Simple_repeat 2 49 0 205 367 0 13 chr2 63595040 63595119 -187092735 + L2 LINE L2 3111 3188 -84 210 377 47 9 chr2 63595285 63595391 -187092463 + MIR SINE MIR 20 129 -79 243 0 0 0 chr2 63596343 63596370 -187091484 + (T)n Simple_repeat Simple_repeat 1 27 0 463 223 35 2 chr2 63596490 63596623 -187091231 - L1ME3 LINE L1 -70 6092 5958 734 217 101 5 chr2 63598932 63599121 -187088733 + MIR SINE MIR 53 259 -3 583 257 64 16 chr2 63601805 63601992 -187085862 - L2 LINE L2 0 3313 3118 298 326 43 36 chr2 63602328 63602466 -187085388 + L2 LINE L2 3134 3272 0 252 288 17 0 chr2 63602936 63602995 -187084859 - L2 LINE L2 -22 3291 3232 180 77 0 0 chr2 63603114 63603140 -187084714 + (CA)n Simple_repeat Simple_repeat 2 27 0 242 217 0 0 chr2 63603383 63603429 -187084425 - L2 LINE L2 -1 3312 3267 225 65 0 0 chr2 63603769 63603800 -187084054 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 509 306 59 6 chr2 63604032 63604249 -187083605 + MIR SINE MIR 14 252 -10 953 200 79 83 chr2 63606207 63606497 -187081357 + MSTD LTR MaLR 108 396 0 1442 173 42 6 chr2 63606563 63606876 -187080978 + MER33 DNA MER1_type 1 324 0 252 276 138 46 chr2 63607253 63607427 -187080427 + MIR SINE MIR 8 197 -65 381 302 0 40 chr2 63607649 63607798 -187080056 + L2 LINE L2 2919 3061 -211 262 290 0 14 chr2 63608275 63608413 -187079441 + (TA)n Simple_repeat Simple_repeat 2 137 0 356 189 0 33 chr2 63608414 63608504 -187079350 + (TATATG)n Simple_repeat Simple_repeat 2 88 0 264 30 0 0 chr2 63608541 63608574 -187079280 + (TAGA)n Simple_repeat Simple_repeat 1 33 0 448 291 87 25 chr2 63612010 63612225 -187075629 + MIR SINE MIR 2 221 -40 244 311 67 25 chr2 63612261 63612380 -187075474 - MIR3 SINE MIR -21 187 64 209 222 0 0 chr2 63612782 63612827 -187075027 + T-rich Low_complexity Low_complexity 1 45 0 242 185 31 0 chr2 63613328 63613393 -187074461 + (TATG)n Simple_repeat Simple_repeat 2 68 0 21 0 0 0 chr2 63613764 63613785 -187074069 + AT_rich Low_complexity Low_complexity 1 21 0 265 379 16 16 chr2 63613950 63614074 -187073780 - MIR SINE MIR -119 143 20 1542 181 19 9 chr2 63614993 63615308 -187072546 + MER33 DNA MER1_type 1 318 -6 195 331 139 12 chr2 63616786 63616952 -187070902 - MIR3 SINE MIR 0 208 22 200 151 0 19 chr2 63619796 63619849 -187068005 + (TG)n Simple_repeat Simple_repeat 1 52 0 266 321 25 0 chr2 63620480 63620561 -187067293 - MIR3 SINE MIR -6 202 120 409 348 106 50 chr2 63621065 63621981 -187065873 + L2 LINE L2 2307 3270 -2 267 333 29 22 chr2 63621990 63622128 -187065726 + MIR3 SINE MIR 69 207 -1 267 103 0 0 chr2 63624012 63624051 -187063803 + (TC)n Simple_repeat Simple_repeat 2 40 0 1984 160 32 12 chr2 63625431 63625657 -187062197 + MLT1B LTR MaLR 1 238 -152 3953 126 23 29 chr2 63625657 63626314 -187061540 - MER39B LTR ERV1 0 653 1 1984 160 32 12 chr2 63626314 63626430 -187061424 + MLT1B LTR MaLR 238 350 -40 372 271 42 42 chr2 63626564 63626730 -187061124 - L1ME LINE L1 -578 5868 5703 601 338 67 13 chr2 63626753 63626978 -187060876 - MIR SINE MIR -1 261 25 511 285 31 31 chr2 63626978 63627171 -187060683 - LTR16C LTR ERVL -1 490 298 2081 135 24 0 chr2 63627802 63628098 -187059756 + AluSx SINE Alu 1 303 -9 263 315 22 22 chr2 63628455 63628544 -187059310 + MER5A DNA MER1_type 2 90 -99 22 0 0 0 chr2 63628902 63628924 -187058930 + AT_rich Low_complexity Low_complexity 1 22 0 1914 292 111 15 chr2 63629201 63629951 -187057903 - L2 LINE L2 -687 2627 1806 270 297 0 0 chr2 63630208 63630272 -187057582 + L2 LINE L2 3250 3313 0 1040 219 45 0 chr2 63631182 63631383 -187056471 + MER58A DNA MER1_type 1 210 -14 205 314 133 38 chr2 63631694 63631799 -187056055 - MER5A DNA MER1_type -72 117 3 372 269 137 46 chr2 63632813 63633032 -187054822 - L2 LINE L2 0 3313 3075 348 323 49 30 chr2 63633414 63633578 -187054276 + L2 LINE L2 3104 3270 -43 273 119 0 0 chr2 63633944 63633986 -187053868 + (TA)n Simple_repeat Simple_repeat 1 42 0 250 244 35 52 chr2 63634007 63634122 -187053732 - L1MC4 LINE L1 -4 8038 7926 2779 156 13 5 chr2 63634334 63634782 -187053072 - Tigger2 DNA MER2_type 0 2718 2267 415 173 0 37 chr2 63634754 63634835 -187053019 - Tigger2 DNA MER2_type -2640 78 1 * 412 299 60 18 chr2 63635190 63635516 -187052338 - L1ME LINE L1 -807 5619 5273 1728 159 39 31 chr2 63635516 63635874 -187051980 - MER46B DNA MER2_type 0 236 1 412 299 60 18 chr2 63635874 63635928 -187051926 - L1ME LINE L1 -1153 5273 5223 666 309 26 35 chr2 63636109 63636247 -187051607 + MIR SINE MIR 21 158 -104 1621 152 72 72 chr2 63636247 63636608 -187051246 - MLT1A1 LTR MaLR 0 365 5 666 309 26 35 chr2 63636608 63636699 -187051155 + MIR SINE MIR 158 248 -14 558 272 43 18 chr2 63636755 63637034 -187050820 - L1ME LINE L1 -1440 4986 4701 1237 147 65 12 chr2 63637215 63637460 -187050394 - Tigger2 DNA MER2_type 0 2718 2461 4332 158 23 8 chr2 63637513 63638259 -187049595 - Tigger2 DNA MER2_type -1961 757 1 259 287 125 37 chr2 63638268 63638596 -187049258 - L1ME LINE L1 -1962 4464 4108 2038 144 24 27 chr2 63638659 63639035 -187048819 + THE1C LTR MaLR 1 375 0 9476 126 34 35 chr2 63639035 63640618 -187047236 + THE1C-int LTR MaLR 1 1580 0 2077 137 39 25 chr2 63640618 63640977 -187046877 + THE1C LTR MaLR 1 364 -11 25 51 0 0 chr2 63640986 63641025 -187046829 + AT_rich Low_complexity Low_complexity 1 39 0 17759 167 35 11 chr2 63641101 63644249 -187043605 + L1M1 LINE L1 9 3233 -4332 4091 163 255 5 chr2 63644246 63645785 -187042069 + L1MA1 LINE L1 2529 4453 -3112 * 6933 113 40 4 chr2 63645797 63647183 -187040671 + L1MA1 LINE L1 6306 7721 0 340 267 116 32 chr2 63647224 63647501 -187040353 - L1ME LINE L1 -2503 3923 3624 1106 146 0 0 chr2 63647593 63647751 -187040103 - AluSg/x SINE Alu -23 289 132 423 256 99 0 chr2 63648212 63648333 -187039521 + MLT1E3 LTR MaLR 1 133 -521 1327 213 100 3 chr2 63648366 63648657 -187039197 + MLT1E3 LTR MaLR 301 619 -5 307 325 84 11 chr2 63648818 63649009 -187038845 - L1ME LINE L1 -3732 2694 2490 21 57 0 0 chr2 63649234 63649269 -187038585 + AT_rich Low_complexity Low_complexity 1 35 0 810 87 8 24 chr2 63649304 63649431 -187038423 + L1PB1 LINE L1 6025 6149 -2 537 200 0 0 chr2 63649664 63649754 -187038100 - 5S rRNA rRNA -31 90 1 231 259 0 0 chr2 63649833 63649891 -187037963 - L1ME LINE L1 -4773 1653 1596 1204 298 33 51 chr2 63649929 63650502 -187037352 + MLT1G LTR MaLR 28 590 0 412 270 90 48 chr2 63650509 63650698 -187037156 + L2 LINE L2 3117 3313 0 31 0 0 0 chr2 63650743 63650774 -187037080 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 63651350 63651379 -187036475 + AT_rich Low_complexity Low_complexity 1 29 0 206 235 0 20 chr2 63651379 63651430 -187036424 + GA-rich Low_complexity Low_complexity 3 52 0 232 325 24 0 chr2 63651745 63651828 -187036026 + L2 LINE L2 3228 3312 -1 516 256 95 7 chr2 63653764 63653901 -187033953 + MIR SINE MIR 65 213 -49 21 0 0 0 chr2 63653994 63654015 -187033839 + AT_rich Low_complexity Low_complexity 1 21 0 180 386 0 0 chr2 63654228 63654285 -187033569 + MIR SINE MIR 76 132 -76 334 275 58 53 chr2 63654326 63654497 -187033357 - MIR SINE MIR -60 202 31 1601 185 85 46 chr2 63654643 63655033 -187032821 - MSTC LTR MaLR -23 405 1 180 111 0 0 chr2 63655047 63655074 -187032780 + (T)n Simple_repeat Simple_repeat 1 27 0 3224 66 0 2 chr2 63655081 63655504 -187032350 - L1PA7 LINE L1 0 6154 5733 8022 47 11 1 chr2 63655504 63657282 -187030572 - L1PA5 LINE L1 -2 6152 4359 1076 290 105 11 chr2 63657306 63657771 -187030083 + L2 LINE L2 2805 3313 0 287 227 27 0 chr2 63657881 63657956 -187029898 - LTR67 LTR ERVL 0 557 481 290 297 0 0 chr2 63658381 63658445 -187029409 - MER115 DNA AcHobo -628 65 2 405 319 32 43 chr2 63658684 63658872 -187028982 - LTR67 LTR ERVL -368 189 4 538 237 17 40 chr2 63658932 63659105 -187028749 - L2 LINE L2 -596 2718 2550 1358 233 21 6 chr2 63660685 63661015 -187026839 + L1ME1 LINE L1 4446 4780 -1366 963 188 0 46 chr2 63661021 63661218 -187026636 - MER58B DNA MER1_type 0 341 154 552 209 6 98 chr2 63661287 63661326 -187026528 - MER58B DNA MER1_type -193 148 107 5323 44 0 0 chr2 63661326 63661963 -187025891 + L1PA5 LINE L1 5516 6152 -2 552 209 6 98 chr2 63661963 63662086 -187025768 - MER58B DNA MER1_type -234 107 1 926 225 69 103 chr2 63662086 63662522 -187025332 + L1ME1 LINE L1 4779 5199 -947 409 207 138 0 chr2 63662519 63662635 -187025219 + L1ME1 LINE L1 5740 5871 -295 * 429 174 18 9 chr2 63662682 63662791 -187025063 + (TA)n Simple_repeat Simple_repeat 2 111 0 432 286 31 66 chr2 63662814 63663041 -187024813 + L1ME1 LINE L1 5945 6163 -3 1694 266 102 13 chr2 63663593 63664012 -187023842 + L1ME LINE L1 3417 3797 -2349 4636 118 16 23 chr2 63664012 63664168 -187023686 + L1PB3 LINE L1 5411 5567 -587 2228 110 3 3 chr2 63664168 63664477 -187023377 + AluSx SINE Alu 1 309 -3 4636 118 16 23 chr2 63664477 63665067 -187022787 + L1PB3 LINE L1 5567 6152 -2 1694 266 102 13 chr2 63665067 63665455 -187022399 + L1ME LINE L1 3797 4289 -1857 788 255 90 19 chr2 63665637 63666005 -187021849 + L1ME LINE L1 4345 4738 -1408 889 200 0 0 chr2 63666006 63666171 -187021683 - AluSg/x SINE Alu -5 307 143 294 231 22 22 chr2 63666205 63666296 -187021558 + L1ME LINE L1 4862 4952 -1194 257 183 98 61 chr2 63666298 63666380 -187021474 + L1ME LINE L1 5005 5089 -1057 21 36 0 0 chr2 63666567 63666595 -187021259 + AT_rich Low_complexity Low_complexity 1 28 0 368 280 61 38 chr2 63666886 63667018 -187020836 + MIR SINE MIR 11 145 -117 28 48 0 0 chr2 63667250 63667292 -187020562 + AT_rich Low_complexity Low_complexity 1 42 0 232 154 0 58 chr2 63669239 63669291 -187018563 + L2 LINE L2 3265 3313 0 342 296 11 0 chr2 63669300 63669388 -187018466 - MIR SINE MIR -102 160 72 316 257 97 9 chr2 63669667 63669780 -187018074 + L1ME LINE L1 5630 5752 -369 261 83 0 0 chr2 63670723 63670759 -187017095 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 218 275 174 29 chr2 63671031 63671169 -187016685 - MIR SINE MIR -17 245 88 260 236 104 66 chr2 63671748 63671854 -187016000 + MIR3 SINE MIR 99 208 0 306 320 164 14 chr2 63671925 63672200 -187015654 + L2 LINE L2 2092 2407 -907 180 0 0 0 chr2 63674319 63674339 -187013515 + (TG)n Simple_repeat Simple_repeat 2 21 0 447 35 0 0 chr2 63675029 63675086 -187012768 + (TA)n Simple_repeat Simple_repeat 1 57 0 4640 50 7 0 chr2 63676308 63676847 -187011007 - L1PA7 LINE L1 0 6154 5612 336 258 32 0 chr2 63679076 63679169 -187008685 - MIR SINE MIR -56 206 111 24 0 0 0 chr2 63679914 63679938 -187007916 + AT_rich Low_complexity Low_complexity 1 24 0 239 291 37 45 chr2 63680695 63680829 -187007025 - MIR SINE MIR -6 256 124 434 286 137 25 chr2 63682106 63682267 -187005587 - MIR SINE MIR -13 249 71 1178 148 5 5 chr2 63682496 63682685 -187005169 + MER53 DNA DNA 1 189 0 1677 212 57 22 chr2 63683272 63683673 -187004181 + MLT1C LTR MaLR 51 465 -2 1181 158 26 81 chr2 63683810 63683845 -187004009 - MER58A DNA MER1_type -2198 222 187 2766 10 0 13 chr2 63683845 63684153 -187003701 + AluYa5 SINE Alu 1 304 -7 1181 158 26 81 chr2 63684153 63684351 -187003503 - MER58A DNA MER1_type -2233 187 2 641 357 26 24 chr2 63684547 63684973 -187002881 + MARNA DNA Mariner 135 561 -25 21 0 0 0 chr2 63685547 63685568 -187002286 + AT_rich Low_complexity Low_complexity 1 21 0 1084 245 23 0 chr2 63686540 63686756 -187001098 - MER58A DNA MER1_type -3 221 1 279 315 0 0 chr2 63686895 63686968 -187000886 + MIR3 SINE MIR 111 183 -25 239 79 26 0 chr2 63687663 63687701 -187000153 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 343 356 50 38 chr2 63687756 63688155 -186999699 + LTR16C LTR ERVL 73 476 -15 341 351 40 40 chr2 63688168 63688390 -186999464 - MIR SINE MIR -21 241 20 202 26 51 51 chr2 63690061 63690100 -186997754 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 655 264 179 5 chr2 63690641 63690842 -186997012 + MIR SINE MIR 6 241 -21 308 273 70 64 chr2 63690923 63691110 -186996744 - MIR3 SINE MIR -7 201 14 728 169 175 0 chr2 63692101 63692255 -186995599 + L1MC4 LINE L1 7403 7583 -459 2851 10 0 0 chr2 63692968 63693272 -186994582 - AluYa5 SINE Alu 0 311 8 3014 192 26 2 chr2 63693727 63694264 -186993590 + MER44D DNA MER2_type 1 605 0 194 314 211 15 chr2 63696311 63696572 -186991282 + L2 LINE L2 877 1188 -2126 537 210 0 32 chr2 63696572 63696758 -186991096 + GA-rich Low_complexity Low_complexity 1 180 0 242 332 42 42 chr2 63696759 63696949 -186990905 + L2 LINE L2 1181 1370 -1944 1044 260 77 80 chr2 63697151 63697648 -186990206 - L1MC4a LINE L1 -1825 5983 5487 2328 112 0 0 chr2 63697648 63697953 -186989901 - AluSx SINE Alu -7 305 1 1044 260 77 80 chr2 63697953 63698028 -186989826 - L1MC4a LINE L1 -2321 5487 5413 2040 319 92 31 chr2 63698181 63699395 -186988459 + L2 LINE L2 1540 2877 -436 1415 239 82 72 chr2 63699395 63699897 -186987957 + MLT1J LTR MaLR 5 511 0 2040 319 92 31 chr2 63699897 63700359 -186987495 + L2 LINE L2 2877 3310 -3 624 282 70 4 chr2 63700381 63700616 -186987238 + MIR SINE MIR 18 262 0 504 32 0 0 chr2 63701300 63701362 -186986492 + (CA)n Simple_repeat Simple_repeat 2 63 0 234 243 90 18 chr2 63701423 63701534 -186986320 + MIR SINE MIR 144 262 0 22 0 0 0 chr2 63702566 63702588 -186985266 + AT_rich Low_complexity Low_complexity 1 22 0 244 296 25 0 chr2 63704285 63704366 -186983488 + HsTC2 DNA Tc2 4 86 -1812 477 209 61 180 chr2 63704674 63704795 -186983059 + L2 LINE L2 3011 3145 -168 2218 123 3 0 chr2 63704795 63705103 -186982751 - AluSp SINE Alu 0 313 5 477 209 61 180 chr2 63705103 63705325 -186982529 + L2 LINE L2 3145 3313 0 186 143 0 0 chr2 63705740 63705775 -186982079 + (TTA)n Simple_repeat Simple_repeat 3 37 0 266 333 0 0 chr2 63706416 63706485 -186981369 - L2 LINE L2 -2 3270 3202 215 281 98 0 chr2 63706749 63706831 -186981023 - MIR SINE MIR -66 196 107 1530 238 113 32 chr2 63706831 63707293 -186980561 - MLT1D LTR MaLR 0 505 7 197 268 98 61 chr2 63707303 63707385 -186980469 - MIR SINE MIR -152 110 26 6821 132 15 9 chr2 63707402 63708713 -186979141 - L1MA5A LINE L1 -3 6294 4970 572 291 88 86 chr2 63708879 63709288 -186978566 - L2 LINE L2 -1 3271 2862 470 229 46 0 chr2 63710567 63710676 -186977178 + MIR SINE MIR 30 143 -65 190 354 179 15 chr2 63712042 63712237 -186975617 - MIR SINE MIR -2 260 34 187 401 54 7 chr2 63712462 63712609 -186975245 + L2 LINE L2 2934 3087 -185 310 290 0 0 chr2 63712771 63712840 -186975014 - L2 LINE L2 -2 3311 3243 766 307 19 4 chr2 63713197 63713454 -186974400 - MIR SINE MIR -1 261 1 23 0 0 0 chr2 63713553 63713576 -186974278 + AT_rich Low_complexity Low_complexity 1 23 0 2081 129 0 13 chr2 63713969 63714271 -186973583 - AluSx SINE Alu -14 298 1 195 225 0 0 chr2 63715144 63715184 -186972670 - L2 LINE L2 -20 3293 3254 288 111 0 0 chr2 63715306 63715360 -186972494 + (CAAA)n Simple_repeat Simple_repeat 1 54 0 416 223 85 62 chr2 63715930 63716085 -186971769 - MIR SINE MIR 0 262 103 531 276 70 27 chr2 63716277 63716462 -186971392 + MIR3 SINE MIR 16 208 0 351 0 0 0 chr2 63717199 63717238 -186970616 + (CA)n Simple_repeat Simple_repeat 2 40 0 196 298 35 0 chr2 63717470 63717527 -186970327 - MIR3 SINE MIR 0 208 150 578 214 220 0 chr2 63717528 63717696 -186970158 - MER58A DNA MER1_type -4 220 16 991 209 5 10 chr2 63718385 63718591 -186969263 - MER6B DNA MER2_type -5 205 1 244 301 62 53 chr2 63719075 63719188 -186968666 - MIR SINE MIR -4 258 145 410 258 31 0 chr2 63719492 63719620 -186968234 - L1MC4 LINE L1 -130 7912 7781 305 24 24 0 chr2 63720495 63720537 -186967317 + (CA)n Simple_repeat Simple_repeat 2 44 0 401 256 207 4 chr2 63720541 63720787 -186967067 - L1MC4 LINE L1 -145 7897 7602 388 70 70 38 chr2 63720805 63720962 -186966892 + (TA)n Simple_repeat Simple_repeat 1 162 0 38 75 0 0 chr2 63720974 63721054 -186966800 + AT_rich Low_complexity Low_complexity 1 80 0 355 51 17 17 chr2 63721054 63721113 -186966741 + (TTATA)n Simple_repeat Simple_repeat 1 59 0 244 319 44 0 chr2 63721113 63721226 -186966628 - L1MC4a LINE L1 -1060 6748 6631 263 333 53 8 chr2 63721482 63721614 -186966240 + MIR SINE MIR 125 262 0 735 277 92 4 chr2 63722282 63722520 -186965334 + MIR SINE MIR 2 260 -2 535 327 146 43 chr2 63722976 63723755 -186964099 + L2 LINE L2 2422 3272 0 318 132 0 0 chr2 63725088 63725141 -186962713 + (A)n Simple_repeat Simple_repeat 1 53 0 219 167 24 0 chr2 63726825 63726867 -186960987 + (ATG)n Simple_repeat Simple_repeat 2 44 0 220 262 0 0 chr2 63726953 63727014 -186960840 - MIR SINE MIR -78 130 70 192 97 0 0 chr2 63727548 63727579 -186960275 + (CA)n Simple_repeat Simple_repeat 1 31 0 453 246 118 46 chr2 63728981 63729166 -186958688 - MIR SINE MIR -48 214 16 278 268 0 42 chr2 63730229 63730300 -186957554 + MIR SINE MIR 53 115 -93 234 91 0 0 chr2 63730848 63730881 -186956973 + (TG)n Simple_repeat Simple_repeat 1 33 0 441 334 55 50 chr2 63732151 63732609 -186955245 + L2 LINE L2 2853 3312 -1 350 299 88 42 chr2 63732998 63733383 -186954471 + LTR33 LTR ERVL 113 515 -6 880 193 0 47 chr2 63734816 63734987 -186952867 + FAM SINE Alu 1 163 -12 28 29 0 0 chr2 63735280 63735315 -186952539 + AT_rich Low_complexity Low_complexity 1 35 0 186 290 242 8 chr2 63735338 63735462 -186952392 + MIR3 SINE MIR 31 183 -25 224 234 62 16 chr2 63735495 63735559 -186952295 - MER91C DNA MER1_type -42 98 32 181 396 10 40 chr2 63735826 63735927 -186951927 - L2 LINE L2 -86 3186 3089 213 250 0 29 chr2 63736185 63736253 -186951601 + GA-rich Low_complexity Low_complexity 1 66 0 510 263 13 26 chr2 63736418 63736558 -186951296 + L2 LINE L2 3160 3299 -14 192 77 0 0 chr2 63736558 63736584 -186951270 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 510 263 13 26 chr2 63736584 63736599 -186951255 + L2 LINE L2 3299 3313 0 570 326 35 68 chr2 63740134 63740588 -186947266 + L3 LINE CR1 1050 1488 -89 201 156 0 0 chr2 63744487 63744519 -186943335 + (TAGG)n Simple_repeat Simple_repeat 1 32 0 301 235 37 0 chr2 63744769 63744850 -186943004 - MIR SINE MIR -65 197 114 622 200 43 21 chr2 63747469 63747609 -186940245 - MIR SINE MIR -36 226 84 1772 163 19 26 chr2 63747643 63747950 -186939904 + AluJb SINE Alu 2 306 -6 364 266 0 82 chr2 63748675 63748833 -186939021 + L2 LINE L2 3094 3238 -75 557 295 86 57 chr2 63749508 63749752 -186938102 - MIR SINE MIR -5 257 7 260 227 11 0 chr2 63749937 63750025 -186937829 + (TA)n Simple_repeat Simple_repeat 2 90 0 249 167 0 0 chr2 63750402 63750456 -186937398 + (CA)n Simple_repeat Simple_repeat 2 55 0 28 29 0 0 chr2 63751942 63751977 -186935877 + AT_rich Low_complexity Low_complexity 1 35 0 2327 57 3 3 chr2 63756530 63756835 -186931019 - AluY SINE Alu 0 305 1 689 295 19 84 chr2 63756961 63757283 -186930571 + L2 LINE L2 3013 3313 0 189 0 0 0 chr2 63757961 63757982 -186929872 + (T)n Simple_repeat Simple_repeat 1 21 0 209 244 0 0 chr2 63758228 63758269 -186929585 + (TAA)n Simple_repeat Simple_repeat 2 42 0 312 294 92 17 chr2 63760597 63760716 -186927138 - L2 LINE L2 -5 3267 3140 240 35 0 0 chr2 63760906 63760935 -186926919 + (GAAAA)n Simple_repeat Simple_repeat 5 33 0 249 139 0 0 chr2 63761161 63761204 -186926650 + (CTAG)n Simple_repeat Simple_repeat 1 43 0 498 274 101 64 chr2 63761311 63761530 -186926324 + MIR SINE MIR 9 235 -27 414 286 53 126 chr2 63761783 63762101 -186925753 - L2 LINE L2 -38 3234 2940 2119 130 0 7 chr2 63762372 63762673 -186925181 - AluSx SINE Alu -12 300 2 1080 203 106 4 chr2 63764718 63764974 -186922880 + MLT1E LTR MaLR 308 589 -4 286 320 5 20 chr2 63765884 63766001 -186921853 + CT-rich Low_complexity Low_complexity 1 115 0 186 71 0 0 chr2 63766001 63766029 -186921825 + (T)n Simple_repeat Simple_repeat 1 28 0 991 226 32 5 chr2 63766045 63766262 -186921592 + MER58A DNA MER1_type 1 223 -1 211 290 113 0 chr2 63766268 63766330 -186921524 - L2 LINE L2 -50 3222 3154 519 345 54 5 chr2 63767325 63767548 -186920306 + MIR SINE MIR 16 249 -13 521 289 60 49 chr2 63767978 63768424 -186919430 - L2 LINE L2 -213 3059 2553 207 162 0 0 chr2 63768914 63768951 -186918903 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 338 259 103 9 chr2 63769251 63769367 -186918487 + L1MC4 LINE L1 6585 6711 -1331 3788 136 52 0 chr2 63770417 63771019 -186916835 + L1MB1 LINE L1 5530 6162 -6 955 9 0 0 chr2 63771049 63771157 -186916697 + AluYa5/8 SINE Alu 203 310 0 2493 121 41 8 chr2 63773067 63773430 -186914424 + THE1C LTR MaLR 1 375 0 240 348 0 85 chr2 63773770 63773888 -186913966 + L2 LINE L2 3143 3250 -22 217 170 21 0 chr2 63775933 63775980 -186911874 + GA-rich Low_complexity Low_complexity 1 48 0 183 42 0 0 chr2 63776216 63776240 -186911614 + (CCAA)n Simple_repeat Simple_repeat 1 24 0 424 288 0 65 chr2 63776416 63776555 -186911299 - MIR3 SINE MIR -17 191 62 281 319 67 22 chr2 63776702 63776837 -186911017 + L2 LINE L2 3171 3311 -2 1865 239 128 28 chr2 63776920 63777459 -186910395 + MLT1E LTR MaLR 1 593 0 263 303 30 10 chr2 63780119 63780218 -186907636 + GA-rich Low_complexity Low_complexity 4 104 0 564 127 0 0 chr2 63780346 63780425 -186907429 + MADE1 DNA Mariner 1 79 -1 920 238 5 0 chr2 63782167 63782352 -186905502 - MER5A DNA MER1_type 0 189 4 209 287 261 9 chr2 63782431 63782546 -186905308 + L2 LINE L2 3123 3266 -6 452 240 7 103 chr2 63782584 63782730 -186905124 - MIR3 SINE MIR -6 202 71 460 275 101 16 chr2 63782764 63783030 -186904824 - MIR SINE MIR -7 255 2 239 290 65 48 chr2 63783218 63783342 -186904512 + L2 LINE L2 2921 3046 -226 229 216 0 0 chr2 63783728 63783779 -186904075 + T-rich Low_complexity Low_complexity 1 51 0 43741 34 21 1 chr2 63783779 63789811 -186898043 - L1PA2 LINE L1 0 6155 2 876 153 11 6 chr2 63790026 63790202 -186897652 + GA-rich Low_complexity Low_complexity 1 177 0 351 0 0 0 chr2 63790358 63790397 -186897457 + (CA)n Simple_repeat Simple_repeat 2 40 0 714 273 50 15 chr2 63791786 63791984 -186895870 - MIR3 SINE MIR -2 206 2 2187 122 0 0 chr2 63792083 63792379 -186895475 + AluSx SINE Alu 1 296 -16 890 270 111 13 chr2 63792453 63792842 -186895012 + L1ME4a LINE L1 5695 6121 0 219 213 0 33 chr2 63793009 63793070 -186894784 + MIR SINE MIR 92 150 -112 39872 79 7 10 chr2 63794653 63800826 -186887028 + L1PA5 LINE L1 2 6154 0 294 330 23 40 chr2 63800900 63801002 -186886852 + MIR SINE MIR 20 119 -109 1792 170 17 10 chr2 63801002 63801296 -186886558 - AluJo SINE Alu -16 296 1 294 330 23 40 chr2 63801296 63801343 -186886511 + MIR SINE MIR 119 165 -63 286 163 26 0 chr2 63801877 63801953 -186885901 + L1PB4 LINE L1 6094 6301 -2 357 82 0 0 chr2 63802651 63802700 -186885154 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 2483 209 89 48 chr2 63802913 63803539 -186884315 + MLT1E1 LTR MaLR 1 652 -2 238 337 49 12 chr2 63805892 63806055 -186881799 - MIR3 SINE MIR -2 206 38 204 236 0 36 chr2 63806272 63806327 -186881527 + MIR SINE MIR 182 234 -28 372 250 40 32 chr2 63806511 63806635 -186881219 - MIR3 SINE MIR -14 194 70 335 228 193 29 chr2 63807241 63807412 -186880442 - MIR SINE MIR -44 218 20 1691 97 31 4 chr2 63809386 63809613 -186878241 - L1PA8 LINE L1 0 6172 5940 21 0 0 0 chr2 63810343 63810364 -186877490 + AT_rich Low_complexity Low_complexity 1 21 0 4345 239 69 29 chr2 63811065 63812652 -186875202 - L1MD3 LINE L1 -1 8041 6293 794 181 20 39 chr2 63812698 63812912 -186874942 + MER66A LTR ERV1 97 238 -240 6830 92 15 0 chr2 63812955 63814122 -186873732 + L1PA14 LINE L1 4975 6159 -2 2683 77 11 36 chr2 63814145 63814509 -186873345 + THE1A LTR MaLR 1 355 0 721 124 9 9 chr2 63814646 63814759 -186873095 + MER66A LTR ERV1 361 473 -5 2269 249 69 58 chr2 63814797 63815029 -186872825 - L1MC4a LINE L1 -1543 6265 6037 567 115 0 0 chr2 63815029 63815107 -186872747 - MADE1 DNA Mariner 0 80 3 2269 249 69 58 chr2 63815107 63815863 -186871991 - L1MC4a LINE L1 -1771 6037 5266 1629 177 82 0 chr2 63816481 63816763 -186871091 - AluJo SINE Alu -5 307 3 2006 228 23 30 chr2 63817450 63818017 -186869837 - MLT2F LTR ERVL -43 620 3 502 301 67 38 chr2 63818057 63818551 -186869303 - L1M4c LINE L1 -4645 1918 1263 187 289 0 19 chr2 63821255 63821307 -186866547 - MIR SINE MIR -7 255 205 4349 186 17 32 chr2 63821638 63823326 -186864528 + L1MB2 LINE L1 4481 6174 0 398 306 134 5 chr2 63823383 63823569 -186864285 + MIR SINE MIR 50 259 -3 330 285 19 76 chr2 63823609 63823767 -186864087 - MIR3 SINE MIR -41 167 19 201 74 0 0 chr2 63824590 63824617 -186863237 + (TGG)n Simple_repeat Simple_repeat 1 27 0 225 132 0 0 chr2 63824626 63824664 -186863190 + (TG)n Simple_repeat Simple_repeat 1 38 0 260 274 89 32 chr2 63825136 63825260 -186862594 + LTR33 LTR ERVL 18 148 -373 449 307 83 19 chr2 63825293 63825557 -186862297 + LTR33 LTR ERVL 229 509 -12 180 0 0 0 chr2 63825854 63825874 -186861980 + (T)n Simple_repeat Simple_repeat 1 20 0 28 0 0 0 chr2 63827010 63827038 -186860816 + AT_rich Low_complexity Low_complexity 1 28 0 202 157 20 20 chr2 63828297 63828348 -186859506 + A-rich Low_complexity Low_complexity 1 51 0 211 262 117 19 chr2 63828552 63828655 -186859199 - L2 LINE L2 -11 3302 3190 201 250 16 31 chr2 63828863 63828927 -186858927 - L2 LINE L2 -13 3300 3238 488 259 46 42 chr2 63830947 63831206 -186856648 + MIR SINE MIR 3 262 0 288 278 139 9 chr2 63831281 63831389 -186856465 + MIR SINE MIR 117 238 -24 205 250 71 12 chr2 63833093 63833177 -186854677 - L3b LINE CR1 -185 1398 1310 504 255 80 58 chr2 63835577 63835765 -186852089 - MLT1H1 LTR MaLR -353 202 11 222 171 0 0 chr2 63836851 63836892 -186850962 + (TATG)n Simple_repeat Simple_repeat 3 43 0 273 57 0 0 chr2 63838956 63838991 -186848863 + (TG)n Simple_repeat Simple_repeat 2 36 0 450 299 51 17 chr2 63840806 63840983 -186846871 + MIR3 SINE MIR 12 194 -14 1252 204 57 15 chr2 63841009 63841308 -186846546 - L1MC3 LINE L1 -2 7783 7485 43963 32 21 1 chr2 63841308 63847340 -186840514 - L1PA2 LINE L1 0 6155 1 1514 174 65 0 chr2 63847328 63847603 -186840251 - L1MC3 LINE L1 -283 7502 7210 * 364 157 17 148 chr2 63847608 63847723 -186840131 - MLT1F1 LTR MaLR -433 134 35 2119 158 34 5 chr2 63847723 63848103 -186839751 - L1MD3 LINE L1 -879 7116 6726 231 264 56 14 chr2 63848507 63848579 -186839275 - L2 LINE L2 -222 3050 2976 283 329 96 49 chr2 63849824 63850253 -186837601 + L2 LINE L2 691 1139 -2175 704 202 62 79 chr2 63850433 63850611 -186837243 - MER96 DNA MER1_type 0 175 1 260 336 178 25 chr2 63851131 63851783 -186836071 + L2 LINE L2 1886 2637 -677 289 357 66 70 chr2 63852296 63852582 -186835272 + L2 LINE L2 2986 3270 -2 361 304 167 0 chr2 63853129 63853297 -186834557 - MER91A DNA MER1_type 0 196 1 197 341 0 11 chr2 63854032 63854120 -186833734 + L3b LINE CR1 1350 1436 -147 3019 51 0 3 chr2 63854619 63854991 -186832863 - L1PA8 LINE L1 0 6172 5802 532 222 24 54 chr2 63855032 63855199 -186832655 + MIR SINE MIR 81 242 -20 396 200 0 0 chr2 63855434 63855524 -186832330 + (TG)n Simple_repeat Simple_repeat 1 90 0 387 0 0 0 chr2 63856384 63856427 -186831427 + (GGAA)n Simple_repeat Simple_repeat 2 44 0 243 88 0 0 chr2 63857443 63857477 -186830377 + (TG)n Simple_repeat Simple_repeat 2 35 0 456 374 12 0 chr2 63858117 63858288 -186829566 + MER91A DNA MER1_type 24 196 0 272 296 88 0 chr2 63858624 63858749 -186829105 - L2 LINE L2 0 3272 3137 272 305 35 66 chr2 63858924 63859150 -186828704 - L2 LINE L2 -442 2872 2654 198 293 35 0 chr2 63861032 63861090 -186826764 + L2 LINE L2 3205 3264 -8 714 216 81 51 chr2 63863544 63863780 -186824074 - MIR SINE MIR -12 250 8 657 199 0 0 chr2 63864688 63864824 -186823030 + MIR SINE MIR 79 214 -48 28 0 0 0 chr2 63865414 63865442 -186822412 + AT_rich Low_complexity Low_complexity 1 28 0 452 197 15 15 chr2 63866533 63866665 -186821189 + CT-rich Low_complexity Low_complexity 1 132 0 185 154 26 0 chr2 63867780 63867819 -186820035 + (TCTA)n Simple_repeat Simple_repeat 3 42 0 1623 205 3 7 chr2 63867825 63868122 -186819732 - AluJo SINE Alu -14 298 3 189 0 0 0 chr2 63868175 63868196 -186819658 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 334 328 71 26 chr2 63869415 63869683 -186818171 - L1ME LINE L1 -436 5685 5406 23 0 0 0 chr2 63869855 63869878 -186817976 + AT_rich Low_complexity Low_complexity 1 23 0 353 283 138 18 chr2 63869961 63870261 -186817593 + L1ME LINE L1 5453 5801 -363 728 153 158 27 chr2 63871234 63871417 -186816437 + MER20 DNA MER1_type 11 217 -2 359 328 116 26 chr2 63871836 63872025 -186815829 - MIR3 SINE MIR -2 206 1 198 0 0 0 chr2 63872699 63872721 -186815133 + (T)n Simple_repeat Simple_repeat 1 22 0 354 45 0 0 chr2 63872742 63872786 -186815068 + (TTTTC)n Simple_repeat Simple_repeat 3 46 0 644 267 102 19 chr2 63873625 63873831 -186814023 - MIR SINE MIR -19 243 21 341 324 43 50 chr2 63873868 63874007 -186813847 + MIR3 SINE MIR 21 158 -50 234 320 13 0 chr2 63874258 63874336 -186813518 + L2 LINE L2 780 858 -2456 900 326 211 5 chr2 63874408 63875006 -186812848 + L2 LINE L2 780 1500 -1814 1097 283 56 45 chr2 63875045 63875490 -186812364 + L2 LINE L2 2861 3310 -3 230 263 111 30 chr2 63876125 63876224 -186811630 - MIR SINE MIR 0 262 156 605 304 92 32 chr2 63876357 63876726 -186811128 + LTR16C LTR ERVL 101 491 0 300 350 0 10 chr2 63877924 63878024 -186809830 - MER5A DNA MER1_type 0 189 91 208 245 196 39 chr2 63877956 63878058 -186809796 + MER5A DNA MER1_type 44 161 -28 * 1826 195 128 0 chr2 63878167 63878598 -186809256 + MLT2B2 LTR ERVL 1 486 -29 287 116 0 0 chr2 63878595 63878638 -186809216 - Alu SINE Alu -258 44 2 * 251 33 0 0 chr2 63878676 63878706 -186809148 + MLT2B2 LTR ERVL 525 554 0 333 0 0 0 chr2 63879005 63879042 -186808812 + (TC)n Simple_repeat Simple_repeat 1 37 0 2099 119 0 0 chr2 63879042 63879320 -186808534 - AluSg SINE Alu -32 278 1 2094 105 56 0 chr2 63880020 63880306 -186807548 + AluSx SINE Alu 1 302 -10 1356 236 45 45 chr2 63880311 63880816 -186807038 - L1ME2 LINE L1 -9 6155 5651 571 235 30 8 chr2 63880919 63881051 -186806803 + MIR3 SINE MIR 33 167 -41 353 283 85 51 chr2 63881594 63881771 -186806083 + MIR SINE MIR 9 191 -71 180 344 75 11 chr2 63882457 63882550 -186805304 - MIR SINE MIR -98 164 66 2351 114 0 0 chr2 63883031 63883338 -186804516 + AluSx SINE Alu 1 307 -5 284 275 193 9 chr2 63883377 63883486 -186804368 - MIR3 SINE MIR -75 133 5 1280 205 125 3 chr2 63884519 63884894 -186802960 - Zaphod DNA AcHobo -16 4015 3595 * 2603 220 112 33 chr2 63884891 63885805 -186802049 - Zaphod DNA AcHobo -3040 991 6 253 170 19 0 chr2 63885816 63885869 -186801985 - MLT2B2 LTR ERVL 0 520 467 491 171 9 0 chr2 63885870 63885975 -186801879 + (TCTA)n Simple_repeat Simple_repeat 4 109 0 1251 250 101 22 chr2 63885976 63886384 -186801470 - MLT2B2 LTR ERVL -75 440 1 247 284 168 0 chr2 63887152 63887247 -186800607 - MIR SINE MIR -31 231 121 2365 95 0 3 chr2 63888918 63889222 -186798632 + AluSq SINE Alu 2 304 -9 319 222 0 56 chr2 63889777 63889849 -186798005 - L2 LINE L2 0 3313 3246 400 278 73 73 chr2 63889910 63890144 -186797710 + MIR SINE MIR 25 258 -4 7471 31 3 30 chr2 63890249 63891592 -186796262 - L1PA4 LINE L1 -4 6151 4824 34329 55 2 0 chr2 63891593 63896129 -186791725 - L1PA4 LINE L1 -1590 4556 12 354 159 0 0 chr2 63896294 63896357 -186791497 - L1MA9 LINE L1 0 6312 6250 1318 229 16 22 chr2 63896413 63896561 -186791293 + L1MEc LINE L1 2062 2209 -4006 1445 177 54 0 chr2 63896561 63896838 -186791016 + L1PA16 LINE L1 5873 6164 -2 1318 229 16 22 chr2 63896838 63897333 -186790521 + L1MEc LINE L1 2209 2754 -3461 228 67 0 0 chr2 63897699 63897729 -186790125 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5212 249 71 21 chr2 63898321 63900254 -186787600 - L1MEc LINE L1 -4357 2039 10 571 265 135 5 chr2 63900607 63900807 -186787047 + MIR SINE MIR 26 251 -11 2302 92 3 0 chr2 63903532 63903825 -186784029 - AluSp SINE Alu -7 306 13 5669 152 102 8 chr2 63904222 63905347 -186782507 + Tigger3b DNA MER2_type 1 1231 0 219 146 0 0 chr2 63908438 63908479 -186779375 + (TCC)n Simple_repeat Simple_repeat 3 43 0 227 196 0 0 chr2 63908480 63908526 -186779328 + CT-rich Low_complexity Low_complexity 1 46 0 456 343 12 17 chr2 63908612 63908784 -186779070 - MIR3 SINE MIR -5 203 33 260 197 0 15 chr2 63908839 63908905 -186778949 + CT-rich Low_complexity Low_complexity 2 66 0 450 302 78 51 chr2 63910039 63910243 -186777611 + L2 LINE L2 2947 3165 -148 806 291 5 0 chr2 63910243 63910449 -186777405 - MER63A DNA MER1_type 0 210 4 450 302 78 51 chr2 63910449 63910578 -186777276 + L2 LINE L2 3165 3289 -24 23 68 0 0 chr2 63911332 63911376 -186776478 + AT_rich Low_complexity Low_complexity 1 44 0 244 238 10 40 chr2 63911405 63911506 -186776348 + L1ME3A LINE L1 114 211 -5994 1047 281 117 47 chr2 63912103 63913163 -186774691 + L1ME3A LINE L1 1001 1985 -4230 2524 34 3 0 chr2 63913163 63913458 -186774396 + AluY SINE Alu 1 296 -15 1047 281 117 47 chr2 63913458 63914675 -186773179 + L1ME3A LINE L1 1985 3400 -2815 2730 26 0 6 chr2 63914675 63914988 -186772866 + AluY SINE Alu 1 311 0 1047 281 117 47 chr2 63914988 63915056 -186772798 + L1ME3A LINE L1 3400 3462 -2753 24 32 0 0 chr2 63915068 63915099 -186772755 + AT_rich Low_complexity Low_complexity 1 31 0 386 158 13 0 chr2 63915172 63915248 -186772606 - L1MEc LINE L1 -3372 2843 2767 4713 209 33 41 chr2 63915251 63916897 -186770957 - L1MB2 LINE L1 0 6171 4549 2433 70 3 0 chr2 63916897 63917197 -186770657 - AluY SINE Alu -10 301 1 4713 209 33 41 chr2 63917197 63917785 -186770069 - L1MB2 LINE L1 -1622 4549 3958 1590 228 37 17 chr2 63917772 63918526 -186769328 - L1MEc LINE L1 -3424 2791 2060 * 754 277 66 24 chr2 63918601 63919027 -186768827 + L1ME3A LINE L1 3916 4359 -1856 24 32 0 0 chr2 63919077 63919108 -186768746 + AT_rich Low_complexity Low_complexity 1 31 0 450 330 19 4 chr2 63919208 63919466 -186768388 + L1ME3A LINE L1 4621 4882 -1333 765 278 92 27 chr2 63919573 63920391 -186767463 + L1ME3A LINE L1 5016 5887 -344 364 209 64 9 chr2 63920394 63920504 -186767350 + L1ME3A LINE L1 5947 6062 -177 1420 236 13 81 chr2 63920531 63921073 -186766781 - MLT1D LTR MaLR 0 505 1 215 150 0 25 chr2 63921088 63921128 -186766726 + (TTTTC)n Simple_repeat Simple_repeat 3 41 0 289 234 16 0 chr2 63922550 63922614 -186765240 - MER5A DNA MER1_type 0 189 125 1968 135 25 0 chr2 63922618 63922899 -186764955 - AluJb SINE Alu -24 288 1 190 308 0 0 chr2 63923122 63923174 -186764680 + L2 LINE L2 3217 3268 -4 868 278 62 66 chr2 63923968 63924728 -186763126 + L1MEd LINE L1 692 1448 -4924 575 280 147 48 chr2 63924749 63925116 -186762738 + L1MEd LINE L1 1369 1922 -4641 830 149 0 8 chr2 63925375 63925509 -186762345 + FLAM_A SINE Alu 1 133 0 2179 108 7 10 chr2 63925678 63925985 -186761869 + AluSx SINE Alu 1 306 -6 312 307 73 0 chr2 63926033 63926225 -186761629 + L1MEd LINE L1 2383 2588 -3794 990 296 58 37 chr2 63926334 63927145 -186760709 + L1MEd LINE L1 2745 3572 -2810 1299 207 118 0 chr2 63927999 63928304 -186759550 - MER58B DNA MER1_type 0 341 1 180 270 0 48 chr2 63928421 63928484 -186759370 - L2 LINE L2 -217 3055 2996 360 296 12 56 chr2 63929400 63929562 -186758292 + MIR SINE MIR 58 212 -50 444 267 27 91 chr2 63930887 63931074 -186756780 - MER5B DNA MER1_type -3 175 1 985 197 103 0 chr2 63931082 63931285 -186756569 - MER58A DNA MER1_type 0 224 1 215 367 50 25 chr2 63931294 63931414 -186756440 + L2 LINE L2 3150 3272 0 2579 68 0 0 chr2 63931689 63931996 -186755858 + AluY SINE Alu 1 307 -4 704 204 8 0 chr2 63932520 63932652 -186755202 - FLAM_A SINE Alu 0 133 1 1354 169 4 0 chr2 63985492 63985723 -186702131 + L1MB3 LINE L1 5795 6026 -157 685 132 9 0 chr2 63985719 63985833 -186702021 + L1MB4 LINE L1 6066 6180 0 * 409 301 134 5 chr2 63985891 63986077 -186701777 + MIR SINE MIR 50 259 -3 330 285 19 76 chr2 63986117 63986275 -186701579 - MIR3 SINE MIR -41 167 19 349 305 174 0 chr2 63987014 63987181 -186700673 + MER91A DNA MER1_type 1 196 0 289 357 66 70 chr2 63987728 63988014 -186699840 - L2 LINE L2 -2 3270 2986 354 45 0 0 chr2 63988876 63988920 -186698934 + (GAAAA)n Simple_repeat Simple_repeat 3 46 0 198 0 0 0 chr2 63988941 63988963 -186698891 + (A)n Simple_repeat Simple_repeat 1 22 0 231 264 56 14 chr2 63989884 63989956 -186697898 + L2 LINE L2 2976 3050 -222 2119 158 34 5 chr2 63990360 63990740 -186697114 + L1MD3 LINE L1 6726 7116 -879 364 157 17 148 chr2 63990740 63990855 -186696999 + MLT1F1 LTR MaLR 35 134 -433 1514 174 65 0 chr2 63990860 63991135 -186696719 + L1MC3 LINE L1 7210 7502 -283 * 5260 49 19 3 chr2 63991123 63991817 -186696037 + L1P LINE L1 1 705 -5441 307 287 10 30 chr2 63991918 63992019 -186695835 + MIR3 SINE MIR 98 196 -12 22 35 0 0 chr2 63992956 63992985 -186694869 + AT_rich Low_complexity Low_complexity 1 29 0 278 324 126 0 chr2 63993386 63993497 -186694357 - L2 LINE L2 0 3272 3148 271 157 176 0 chr2 63993801 63993887 -186693967 + MIR SINE MIR 87 147 -61 1715 234 167 4 chr2 63993899 63994365 -186693489 + MLT1F LTR MaLR 1 542 0 571 173 0 10 chr2 63994385 63994512 -186693342 - AluSg/x SINE Alu 0 304 179 243 400 33 0 chr2 63994579 63994729 -186693125 - L2 LINE L2 -2 3270 3116 461 231 0 9 chr2 63994971 63995079 -186692775 - L2 LINE L2 0 3313 3207 2251 85 4 0 chr2 63995147 63995479 -186692375 + AluY SINE Alu 1 333 0 671 281 67 5 chr2 63995479 63995703 -186692151 + MIR SINE MIR 19 256 -6 2168 125 16 0 chr2 63996109 63996412 -186691442 + AluSx SINE Alu 1 308 -4 244 286 16 0 chr2 63996674 63996737 -186691117 - MIR3 SINE MIR -1 207 144 568 155 63 35 chr2 63997705 63997847 -186690007 + MER112 DNA MER1_type 74 219 -41 196 336 109 0 chr2 63998812 63998922 -186688932 - MIR SINE MIR -65 143 22 2141 108 0 3 chr2 63999089 63999375 -186688479 + AluSx SINE Alu 1 285 -27 333 0 0 0 chr2 63999375 63999392 -186688462 + (CA)n Simple_repeat Simple_repeat 1 54 0 333 0 0 0 chr2 63999392 63999429 -186688425 + (CA)n Simple_repeat Simple_repeat 2 38 0 214 195 0 0 chr2 63999531 63999572 -186688282 + (TA)n Simple_repeat Simple_repeat 1 41 0 1641 158 42 7 chr2 64000067 64000351 -186687503 - AluJb SINE Alu -8 304 11 571 299 59 16 chr2 64001249 64001436 -186686418 + MER115 DNA AcHobo 258 452 -241 876 236 72 0 chr2 64002210 64002418 -186685436 + MIR SINE MIR 18 240 -22 2262 132 40 66 chr2 64002956 64003380 -186684474 - MLT2D LTR ERVL 0 414 2 270 81 0 0 chr2 64003449 64003486 -186684368 + (CA)n Simple_repeat Simple_repeat 2 38 0 566 318 51 23 chr2 64003625 64003839 -186684015 - MER115 DNA AcHobo -241 452 233 249 324 25 51 chr2 64004675 64004891 -186682963 + MIR SINE MIR 1 212 -50 297 291 0 0 chr2 64005329 64005408 -186682446 - MIR SINE MIR -67 141 63 2152 109 7 0 chr2 64006806 64007099 -186680755 + AluSp SINE Alu 1 295 -18 366 337 107 15 chr2 64007584 64007780 -186680074 - MIR SINE MIR -21 241 28 444 67 0 0 chr2 64009527 64009587 -186678267 + (TGGA)n Simple_repeat Simple_repeat 4 63 0 426 39 0 0 chr2 64009851 64009903 -186677951 + (TG)n Simple_repeat Simple_repeat 2 53 0 1009 180 6 0 chr2 64010710 64010877 -186676977 + AluJb SINE Alu 131 298 -14 322 215 19 47 chr2 64010883 64010990 -186676864 + GA-rich Low_complexity Low_complexity 4 107 0 2143 147 53 19 chr2 64011969 64012344 -186675510 - MLT1B LTR MaLR -2 388 1 495 287 72 36 chr2 64012515 64012794 -186675060 + L2 LINE L2 3019 3307 -6 1353 280 254 25 chr2 64013588 64014517 -186673337 - L2 LINE L2 -4 3309 2594 3322 135 42 33 chr2 64014517 64015066 -186672788 + MLT2B3 LTR ERVL 1 554 0 1353 280 254 25 chr2 64015066 64015733 -186672121 - L2 LINE L2 -719 2594 1326 764 244 18 18 chr2 64016468 64016685 -186671169 - MIR SINE MIR -17 245 29 361 222 93 13 chr2 64017785 64017916 -186669938 - MIR SINE MIR -63 145 54 2150 139 7 0 chr2 64017926 64018235 -186669619 - AluSx SINE Alu -1 311 1 271 262 0 0 chr2 64018659 64018720 -186669134 + GA-rich Low_complexity Low_complexity 3 63 0 3809 258 57 24 chr2 64020691 64022046 -186665808 + L1MC3 LINE L1 151 1460 -5104 2866 7 0 0 chr2 64022046 64022354 -186665500 + AluYa5 SINE Alu 1 308 -3 3809 258 57 24 chr2 64022354 64023673 -186664181 + L1MC3 LINE L1 1460 3094 -3470 1951 201 16 11 chr2 64023673 64023694 -186664160 - MLT1A1 LTR MaLR 0 365 346 448 86 143 0 chr2 64023694 64023764 -186664090 + MADE1 DNA Mariner 1 80 0 1951 201 16 11 chr2 64023764 64024105 -186663749 - MLT1A1 LTR MaLR -19 346 1 3471 232 62 15 chr2 64024105 64025153 -186662701 + L1MC3 LINE L1 3090 4186 -2378 761 139 19 0 chr2 64025155 64025263 -186662591 + AluSq/x SINE Alu 2 111 -201 341 125 36 18 chr2 64025317 64025373 -186662481 + AluSq/x SINE Alu 55 111 -192 1203 147 0 0 chr2 64025412 64025589 -186662265 + AluJb SINE Alu 116 292 -20 1012 220 20 35 chr2 64025589 64025844 -186662010 + L1MC3 LINE L1 4179 4429 -2135 982 220 0 28 chr2 64025850 64026064 -186661790 + AluJo SINE Alu 2 209 -103 1256 233 40 34 chr2 64026070 64026448 -186661406 + L1MC3 LINE L1 4414 4793 -1771 43252 39 22 1 chr2 64026451 64032481 -186655373 + L1PA3 LINE L1 1 6155 0 7921 185 65 57 chr2 64032557 64033086 -186654768 + L1MC3 LINE L1 4767 5291 -2912 9779 108 3 14 chr2 64033086 64035233 -186652621 - L1PA8 LINE L1 -2 6170 4006 7921 185 65 57 chr2 64035233 64037312 -186650542 + L1MC3 LINE L1 5291 7403 -800 185 0 40 0 chr2 64037312 64037337 -186650517 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 7921 185 65 57 chr2 64037337 64037431 -186650423 + L1MC3 LINE L1 7403 7495 -708 354 244 25 34 chr2 64037431 64037550 -186650304 + MLT1F1 LTR MaLR 7 124 -443 1022 190 6 6 chr2 64037554 64037733 -186650121 + L1MC3 LINE L1 7613 7791 -412 763 147 88 7 chr2 64037734 64037870 -186649984 + L1MC2 LINE L1 6185 6331 -13 307 132 19 0 chr2 64037876 64037929 -186649925 + L1ME3A LINE L1 6102 6155 -15 324 85 0 68 chr2 64038030 64038089 -186649765 - L1PA8 LINE L1 0 6172 6118 1193 29 0 14 chr2 64038105 64038245 -186649609 - L1PA5 LINE L1 0 6154 6017 1418 66 6 0 chr2 64038245 64038428 -186649426 + L1PA4 LINE L1 5732 5915 -240 * 4944 135 58 1 chr2 64038412 64039261 -186648593 - L1PA7 LINE L1 -41 6113 5214 1091 122 0 0 chr2 64039363 64039510 -186648344 - AluSq/x SINE Alu -165 147 1 1077 150 50 0 chr2 64039510 64039690 -186648164 - MLT2B1 LTR ERVL -56 464 276 226 47 70 0 chr2 64039691 64039734 -186648120 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 316 77 0 0 chr2 64039734 64039773 -186648081 + MLT2C2 LTR ERVL 425 463 -1 295 343 57 0 chr2 64040310 64040415 -186647439 - MIR SINE MIR -102 160 50 1920 142 0 0 chr2 64040415 64040690 -186647164 + AluSp SINE Alu 1 275 -38 198 0 0 0 chr2 64040799 64040821 -186647033 + (T)n Simple_repeat Simple_repeat 1 22 0 619 122 0 47 chr2 64040880 64040987 -186646867 - AluS SINE Alu -211 102 1 1055 152 55 60 chr2 64040988 64041205 -186646649 + MER2 DNA MER2_type 127 342 -3 840 239 252 0 chr2 64041206 64041528 -186646326 - L2 LINE L2 -1082 2232 1830 831 293 43 77 chr2 64042206 64042357 -186645497 + HAL1 LINE L1 34 189 -2318 1967 119 3 11 chr2 64042357 64042663 -186645191 + AluSx SINE Alu 1 304 0 831 293 43 77 chr2 64042663 64042927 -186644927 + HAL1 LINE L1 189 436 -2071 2414 144 80 7 chr2 64043034 64043470 -186644384 + LTR18B LTR ERVL 147 614 0 2310 81 7 16 chr2 64043633 64043942 -186643912 - AluSc SINE Alu -3 306 1 2316 104 3 0 chr2 64044921 64045218 -186642636 - AluSx SINE Alu -14 298 1 674 149 0 0 chr2 64045236 64045330 -186642524 - FAM SINE Alu -28 157 64 1712 99 4 0 chr2 64045332 64045564 -186642290 + MER48 LTR ERV1 1 233 -154 1422 103 0 0 chr2 64045694 64045878 -186641976 - AluSx SINE Alu -127 185 2 1431 94 214 13 chr2 64046499 64046733 -186641121 + AluSg1 SINE Alu 11 291 -18 21 0 0 0 chr2 64046780 64046801 -186641053 + AT_rich Low_complexity Low_complexity 1 21 0 1914 129 14 7 chr2 64046985 64047321 -186640533 - AluSx SINE Alu 0 338 1 2228 94 0 0 chr2 64047610 64047896 -186639958 + AluY SINE Alu 1 286 -25 189 0 0 0 chr2 64047899 64047920 -186639934 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1571 189 38 25 chr2 64047922 64048239 -186639615 - MLT2F LTR ERVL -342 321 1 279 189 0 0 chr2 64048251 64048304 -186639550 - L1MC4a LINE L1 -1875 5933 5881 2402 97 3 0 chr2 64048319 64048630 -186639224 - AluSq SINE Alu -1 312 1 243 0 0 0 chr2 64048656 64048683 -186639171 + (T)n Simple_repeat Simple_repeat 1 27 0 870 221 34 131 chr2 64048694 64048852 -186639002 - L1MC4a LINE L1 -2045 5763 5591 1145 15 0 15 chr2 64048852 64048982 -186638872 + L1PA4 LINE L1 6020 6147 -8 870 221 34 131 chr2 64048982 64049235 -186638619 - L1MC4a LINE L1 -2217 5591 5392 367 161 0 0 chr2 64049432 64049488 -186638366 + AluSg/x SINE Alu 219 274 -26 742 77 0 17 chr2 64049488 64049605 -186638249 + (GGAA)n Simple_repeat Simple_repeat 3 117 0 961 103 5 27 chr2 64049654 64049838 -186638016 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 625 230 170 37 chr2 64049838 64050108 -186637746 + HAL1 LINE L1 2187 2492 -15 24 32 0 0 chr2 64050147 64050178 -186637676 + AT_rich Low_complexity Low_complexity 1 31 0 2509 52 3 3 chr2 64050963 64051269 -186636585 - AluY SINE Alu -5 306 1 245 250 105 0 chr2 64051365 64051441 -186636413 - L2 LINE L2 -1524 1790 1707 218 157 0 39 chr2 64051459 64051510 -186636344 + CT-rich Low_complexity Low_complexity 2 50 0 884 141 0 40 chr2 64051579 64051728 -186636126 - FLAM_C SINE Alu 0 143 1 666 286 118 21 chr2 64051739 64052026 -186635828 - L2 LINE L2 -1611 1703 1389 1081 169 0 0 chr2 64052030 64052196 -186635658 + FRAM SINE Alu 1 165 -11 1807 148 4 0 chr2 64052196 64052460 -186635394 + AluSx SINE Alu 17 281 -31 367 191 0 0 chr2 64052460 64052523 -186635331 - AluJ/FLAM SINE Alu -239 63 1 28 71 0 0 chr2 64052536 64052592 -186635262 + AT_rich Low_complexity Low_complexity 1 56 0 1996 132 27 0 chr2 64052709 64053005 -186634849 + AluSx SINE Alu 2 305 -7 1197 189 213 4 chr2 64053009 64053133 -186634721 + AluSx SINE Alu 1 98 -204 1898 157 0 16 chr2 64053133 64053461 -186634393 + AluSx SINE Alu 1 312 0 1197 189 213 4 chr2 64053461 64053585 -186634269 + AluSx SINE Alu 98 301 -1 1983 153 3 0 chr2 64053609 64053904 -186633950 + AluSx SINE Alu 7 302 -10 523 255 97 40 chr2 64053917 64054215 -186633639 + L1M4 LINE L1 3971 4285 -1861 2231 92 16 25 chr2 64054234 64054550 -186633304 + AluSp SINE Alu 1 313 0 249 159 0 0 chr2 64054550 64054594 -186633260 + L1MC4 LINE L1 7588 7631 -411 317 238 107 0 chr2 64054594 64054678 -186633176 + MER21B LTR ERV1 3 95 -768 514 169 52 52 chr2 64054717 64054853 -186633001 + MER21B LTR ERV1 98 233 -630 225 233 0 0 chr2 64054983 64055073 -186632781 + (CCG)n Simple_repeat Simple_repeat 3 92 0 27 49 0 0 chr2 64056400 64056441 -186631413 + AT_rich Low_complexity Low_complexity 1 41 0 519 235 17 0 chr2 64056468 64056587 -186631267 + MER21B LTR ERV1 342 462 -401 1545 146 119 8 chr2 64056588 64056849 -186631005 - AluSg1 SINE Alu -18 291 2 1433 91 0 0 chr2 64056861 64057047 -186630807 - AluSg/x SINE Alu -8 302 117 525 255 0 0 chr2 64057090 64057366 -186630488 + T-rich Low_complexity Low_complexity 1 276 0 293 246 22 43 chr2 64057385 64057523 -186630331 + T-rich Low_complexity Low_complexity 4 138 0 303 129 0 97 chr2 64057630 64057660 -186630194 - Alu SINE Alu -246 56 33 2755 96 0 48 chr2 64057660 64058054 -186629800 + MER51B LTR ERV1 3 377 0 303 129 0 97 chr2 64058054 64058085 -186629769 - Alu SINE Alu -269 33 1 683 215 161 81 chr2 64058089 64058265 -186629589 + MER21A LTR ERV1 549 709 -222 544 96 0 0 chr2 64058265 64058338 -186629516 - L1MA2 LINE L1 -6 6298 6226 683 215 161 81 chr2 64058338 64058459 -186629395 + MER21A LTR ERV1 709 870 -61 528 169 0 0 chr2 64058487 64058570 -186629284 - FLAM SINE Alu -12 131 49 1068 189 71 55 chr2 64058605 64058859 -186628995 + L1MC4 LINE L1 7630 7887 -155 1520 165 4 0 chr2 64058871 64059107 -186628747 + AluSx SINE Alu 1 237 -75 773 186 0 0 chr2 64059110 64059234 -186628620 + AluJo/FRAM SINE Alu 181 304 -8 1508 198 117 3 chr2 64059234 64059592 -186628262 + L1ME3A LINE L1 5554 5952 -218 421 198 144 64 chr2 64059609 64059811 -186628043 - L1ME3 LINE L1 -1 6161 5944 1635 189 7 20 chr2 64059943 64060244 -186627610 - AluJo SINE Alu -12 300 4 575 145 0 0 chr2 64060259 64060342 -186627512 - FLAM SINE Alu -17 126 44 394 289 0 0 chr2 64060356 64060470 -186627384 + L1ME3A LINE L1 6048 6161 -9 24 0 0 0 chr2 64060633 64060657 -186627197 + AT_rich Low_complexity Low_complexity 1 24 0 221 87 29 87 chr2 64060775 64060844 -186627010 + (TAAAAA)n Simple_repeat Simple_repeat 2 66 0 815 279 110 25 chr2 64060849 64061294 -186626560 - L2 LINE L2 -1916 1398 916 2284 103 3 0 chr2 64061556 64061857 -186625997 - AluSx SINE Alu -10 302 1 2416 83 0 3 chr2 64062161 64062462 -186625392 + AluY SINE Alu 1 300 -11 1535 200 53 25 chr2 64062809 64062863 -186624991 + MLT1A1 LTR MaLR 1 52 -313 2357 118 131 13 chr2 64062863 64063245 -186624609 + MSTA LTR MaLR 2 428 0 1535 200 53 25 chr2 64063245 64063545 -186624309 + MLT1A1 LTR MaLR 52 365 0 531 239 87 14 chr2 64063549 64063687 -186624167 + MLT1J LTR MaLR 25 172 -339 572 232 88 39 chr2 64063765 64063946 -186623908 + MLT1J LTR MaLR 321 510 -1 2172 104 3 10 chr2 64064109 64064408 -186623446 + AluSx SINE Alu 1 297 -15 2163 128 0 0 chr2 64065084 64065381 -186622473 + AluSg SINE Alu 1 297 -13 1983 156 0 0 chr2 64065510 64065805 -186622049 + AluSx SINE Alu 1 295 -17 1962 120 60 0 chr2 64066528 64066811 -186621043 + AluSg SINE Alu 1 300 -10 578 64 0 3 chr2 64066821 64067054 -186620800 + AluY SINE Alu 1 293 -16 1705 123 84 0 chr2 64068576 64068865 -186618989 - AluJb SINE Alu 0 311 1 2078 126 7 0 chr2 64068909 64069210 -186618644 + AluSx SINE Alu 1 303 -9 363 172 129 21 chr2 64069265 64069358 -186618496 - AluS SINE Alu -227 73 2 906 205 115 101 chr2 64069362 64069737 -186618117 + MLT1J2 LTR MaLR 71 450 0 959 243 43 20 chr2 64069917 64070172 -186617682 + MIR SINE MIR 2 262 0 2236 97 0 13 chr2 64070549 64070847 -186617007 - AluSq SINE Alu -19 294 1 3197 154 26 9 chr2 64071043 64071588 -186616266 - L1MB4 LINE L1 -2 6178 5625 1973 126 13 10 chr2 64071737 64072039 -186615815 - THE1C LTR MaLR -72 303 1 4260 138 29 48 chr2 64072395 64073143 -186614711 + MER50 LTR ERV1 1 734 0 310 148 0 148 chr2 64073145 64073226 -186614628 - MER50 LTR ERV1 -415 319 251 28 0 0 0 chr2 64073226 64073254 -186614600 + AT_rich Low_complexity Low_complexity 1 28 0 2319 103 0 10 chr2 64073254 64073564 -186614290 - AluSg SINE Alu -3 307 1 1603 122 8 30 chr2 64073564 64073827 -186614027 - MER50 LTR ERV1 -471 263 7 472 284 58 24 chr2 64074080 64074288 -186613566 + LTR33 LTR ERVL 304 518 -3 2002 144 3 31 chr2 64074442 64074761 -186613093 - AluSx SINE Alu 0 312 3 2114 96 3 46 chr2 64074884 64075170 -186612684 + AluSp SINE Alu 1 273 -40 423 0 0 0 chr2 64075170 64075217 -186612637 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2114 96 3 46 chr2 64075217 64075254 -186612600 + AluSp SINE Alu 273 310 -3 2153 82 82 0 chr2 64075282 64075564 -186612290 + AluY SINE Alu 1 305 -6 362 260 36 87 chr2 64075565 64075784 -186612070 - L2 LINE L2 -160 3112 2905 624 132 22 0 chr2 64075790 64075881 -186611973 + U6 snRNA snRNA 8 100 -7 32 0 0 0 chr2 64075889 64075921 -186611933 + AT_rich Low_complexity Low_complexity 1 32 0 2246 95 3 0 chr2 64075923 64076240 -186611614 + AluSp SINE Alu 1 318 0 2119 123 3 7 chr2 64076245 64076555 -186611299 + AluSx SINE Alu 1 309 -3 2083 139 0 0 chr2 64076563 64076857 -186610997 + AluSx SINE Alu 1 294 -18 279 293 57 9 chr2 64076955 64077061 -186610793 + Charlie7 DNA MER1_type 1 111 -2501 469 93 9 167 chr2 64077070 64077124 -186610730 + MSTC LTR MaLR 4 34 -394 755 199 8 0 chr2 64077124 64077255 -186610599 + FLAM_C SINE Alu 2 133 0 469 93 9 167 chr2 64077255 64077308 -186610546 + MSTC LTR MaLR 34 94 -334 2280 106 7 0 chr2 64077314 64077607 -186610247 + AluSx SINE Alu 3 297 -15 432 134 0 0 chr2 64077607 64077674 -186610180 + MSTC LTR MaLR 362 428 0 26 0 0 0 chr2 64077736 64077762 -186610092 + AT_rich Low_complexity Low_complexity 1 26 0 243 88 0 0 chr2 64078434 64078468 -186609386 + (A)n Simple_repeat Simple_repeat 1 34 0 2144 107 34 0 chr2 64078537 64078828 -186609026 - AluSx SINE Alu -11 301 1 2131 109 3 7 chr2 64079745 64080039 -186607815 - AluSx SINE Alu -19 293 1 1955 141 17 7 chr2 64080536 64080834 -186607020 + AluJb SINE Alu 1 301 -11 198 100 0 0 chr2 64081037 64081067 -186606787 - MIR SINE MIR -109 153 124 924 172 6 12 chr2 64081999 64082162 -186605692 - FRAM SINE Alu -5 171 10 310 122 61 0 chr2 64082421 64082470 -186605384 - MER3 DNA MER1_type 0 209 158 833 142 14 14 chr2 64082471 64082619 -186605235 - L1MB8 LINE L1 -2 6176 6029 1642 192 38 0 chr2 64082635 64082757 -186605097 + AluJo SINE Alu 1 117 -195 307 0 47 0 chr2 64082757 64082800 -186605054 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 1642 192 38 0 chr2 64082800 64082969 -186604885 + AluJo SINE Alu 117 303 -9 7399 117 24 19 chr2 64082974 64083648 -186604206 + Tigger1 DNA MER2_type 2 686 -1732 2285 86 3 7 chr2 64083648 64083938 -186603916 - AluSg SINE Alu -21 289 1 7399 117 24 19 chr2 64083938 64084383 -186603471 + Tigger1 DNA MER2_type 686 1127 -1291 2405 87 0 3 chr2 64084384 64084683 -186603171 + AluSq SINE Alu 1 298 -15 1028 262 108 56 chr2 64084787 64085372 -186602482 - MLT1G LTR MaLR -12 578 4 1467 153 4 27 chr2 64085584 64085749 -186602105 - AluJb SINE Alu -56 256 98 2357 132 100 5 chr2 64085749 64086158 -186601696 - MER83 LTR ERV1 0 448 1 1467 153 4 27 chr2 64086158 64086253 -186601601 - AluJb SINE Alu -214 98 2 1769 171 14 3 chr2 64086253 64086545 -186601309 - AluJb SINE Alu -17 295 1 1519 188 43 3 chr2 64086904 64087186 -186600668 - AluJb SINE Alu -19 293 1 722 117 10 0 chr2 64087186 64087289 -186600565 - AluSq/x SINE Alu -177 135 32 1540 164 90 8 chr2 64087291 64087559 -186600295 - AluJb SINE Alu -17 295 6 285 128 18 184 chr2 64087560 64087601 -186600253 - L1MC/D LINE L1 -568 5674 5660 1891 141 20 14 chr2 64087601 64087898 -186599956 + AluSx SINE Alu 1 299 -13 285 128 18 184 chr2 64087898 64087965 -186599889 - L1MC/D LINE L1 -582 5660 5584 972 177 0 0 chr2 64087989 64088153 -186599701 + AluSg/x SINE Alu 142 305 -7 534 145 0 152 chr2 64088161 64088191 -186599663 + AluJo/FLAM SINE Alu 6 39 -273 2267 89 0 7 chr2 64088191 64088484 -186599370 - AluSg SINE Alu -11 299 9 534 145 0 152 chr2 64088484 64088598 -186599256 + AluJo/FLAM SINE Alu 39 128 -184 4272 210 52 38 chr2 64088605 64089732 -186598122 - L1MC/D LINE L1 -660 5582 4427 1669 169 39 7 chr2 64089732 64090011 -186597843 - AluSx SINE Alu -24 288 1 4272 210 52 38 chr2 64090011 64090436 -186597418 - L1MC/D LINE L1 -1815 4427 4009 2102 159 77 31 chr2 64090444 64090661 -186597193 + LTR47A LTR ERVL 19 225 -227 2361 98 0 13 chr2 64090661 64090796 -186597058 + AluSx SINE Alu 1 136 -176 2284 112 3 3 chr2 64090796 64091108 -186596746 + AluSp SINE Alu 2 313 0 2361 98 0 13 chr2 64091108 64091277 -186596577 + AluSx SINE Alu 136 301 -11 2102 159 77 31 chr2 64091277 64091474 -186596380 + LTR47A LTR ERVL 225 452 0 857 142 0 0 chr2 64091526 64091675 -186596179 - FRAM SINE Alu 0 175 27 804 187 22 90 chr2 64091675 64091942 -186595912 - L1MC/D LINE L1 -2214 3932 3684 1687 191 0 0 chr2 64091959 64092258 -186595596 + AluSx SINE Alu 13 311 -1 2124 114 3 13 chr2 64092384 64092690 -186595164 + AluSx SINE Alu 1 303 -9 746 122 8 84 chr2 64092959 64093006 -186594848 - MER2 DNA MER2_type -210 135 86 1692 159 48 14 chr2 64093006 64093295 -186594559 - AluJb SINE Alu -13 299 1 746 122 8 84 chr2 64093295 64093378 -186594476 - MER2 DNA MER2_type -259 86 15 612 245 23 152 chr2 64093394 64093699 -186594155 + L2 LINE L2 2242 2454 -860 797 147 47 16 chr2 64093699 64093828 -186594026 + FLAM_C SINE Alu 1 133 0 612 245 23 152 chr2 64093828 64094041 -186593813 + L2 LINE L2 2454 2693 -621 927 162 27 0 chr2 64094071 64094219 -186593635 - FRAM SINE Alu -25 151 1 428 286 142 7 chr2 64094220 64094580 -186593274 + L2 LINE L2 2688 3100 -213 2263 92 0 0 chr2 64094602 64094933 -186592921 + AluSx SINE Alu 1 331 0 284 316 32 45 chr2 64095844 64095999 -186591855 - L2 LINE L2 0 3313 3161 2281 109 0 3 chr2 64096029 64096323 -186591531 + AluSp SINE Alu 1 293 -20 626 208 0 40 chr2 64096342 64096467 -186591387 + Charlie1 DNA MER1_type 1 120 -2641 2302 71 0 10 chr2 64098356 64098692 -186589162 + AluY SINE Alu 1 311 0 240 86 0 0 chr2 64099404 64099439 -186588415 + (CAG)n Simple_repeat Simple_repeat 3 37 0 227 310 0 0 chr2 64099439 64099497 -186588357 + MER5A DNA MER1_type 49 106 -83 235 302 19 38 chr2 64099607 64099713 -186588141 + MER5A DNA MER1_type 51 154 -35 248 269 0 0 chr2 64100187 64100254 -186587600 - MER33 DNA MER1_type 0 363 297 807 148 0 8 chr2 64100275 64100397 -186587457 - FLAM_C SINE Alu -16 127 7 1821 165 7 3 chr2 64100407 64100704 -186587150 - AluJo SINE Alu -14 298 1 1338 156 53 8 chr2 64100719 64100962 -186586892 - MER33 DNA MER1_type -69 255 2 2302 93 3 16 chr2 64101054 64101365 -186586489 - AluY SINE Alu -4 307 1 1779 128 72 21 chr2 64101421 64101711 -186586143 - AluJo SINE Alu -7 305 1 292 276 65 32 chr2 64101720 64101843 -186586011 - L2 LINE L2 -21 3251 3125 2268 111 0 10 chr2 64103360 64103666 -186584188 + AluSq SINE Alu 1 303 -10 408 274 22 74 chr2 64103666 64103896 -186583958 + L1MDa LINE L1 1474 1836 -4590 855 195 6 18 chr2 64104109 64104273 -186583581 + FRAM SINE Alu 1 162 -4 2202 90 11 0 chr2 64104274 64104552 -186583302 + AluSg SINE Alu 1 281 -29 432 244 15 23 chr2 64104671 64104802 -186583052 - AluSq/x SINE Alu -178 135 6 1487 167 51 14 chr2 64104853 64105146 -186582708 + AluSx SINE Alu 8 311 -1 2316 98 0 16 chr2 64105174 64105489 -186582365 + AluSq SINE Alu 1 310 -3 626 189 24 24 chr2 64105503 64105630 -186582224 + FLAM_C SINE Alu 1 127 -6 289 141 64 39 chr2 64105630 64105708 -186582146 - L1MC5 LINE L1 -29 7932 7853 1257 75 11 46 chr2 64105988 64106162 -186581692 + AluSg/x SINE Alu 132 299 -13 641 176 17 8 chr2 64106162 64106281 -186581573 - L1MC1 LINE L1 -5 6328 6209 618 267 94 62 chr2 64106291 64106789 -186581065 - L1MC4 LINE L1 -427 7615 7102 405 240 26 33 chr2 64106915 64106973 -186580881 - L1MC4 LINE L1 -915 7080 7023 2020 141 3 7 chr2 64106973 64107271 -186580583 - AluSx SINE Alu -15 297 1 405 240 26 33 chr2 64107271 64107386 -186580468 - L1MC4 LINE L1 -972 7023 6916 2264 121 0 0 chr2 64107392 64107689 -186580165 - AluSx SINE Alu -15 297 1 407 160 11 173 chr2 64107694 64107894 -186579960 - L1M1 LINE L1 -823 5480 5313 1491 171 6 76 chr2 64108174 64108489 -186579365 - AluJo SINE Alu -17 295 3 2225 118 3 0 chr2 64108776 64109073 -186578781 + AluSq SINE Alu 1 298 -15 271 217 205 0 chr2 64109119 64109202 -186578652 + L2 LINE L2 3210 3309 -4 1461 149 54 68 chr2 64110121 64110416 -186577438 - AluJb SINE Alu -19 293 3 3439 140 66 7 chr2 64110775 64111353 -186576501 + LTR18B LTR ERVL 1 612 -2 1553 204 0 3 chr2 64111373 64111658 -186576196 + HERVL18 LTR ERVL 19 302 -5745 678 249 11 28 chr2 64111643 64111820 -186576034 + HERVL18 LTR ERVL 493 666 -5381 * 314 130 0 0 chr2 64111815 64111861 -186575993 + HERVL18 LTR ERVL 917 962 -5085 * 1089 206 20 11 chr2 64111871 64112217 -186575637 + HERVL18 LTR ERVL 1398 1810 -4237 676 147 17 12 chr2 64112216 64112442 -186575412 + HERVL18 LTR ERVL 2119 2452 -3595 * 3874 199 69 4 chr2 64112439 64113166 -186574688 + HERVL18 LTR ERVL 2718 3491 -2556 234 35 0 0 chr2 64113339 64113368 -186574486 + LTR18B LTR ERVL 2 30 -584 383 313 20 15 chr2 64113469 64113664 -186574190 + MIR SINE MIR 54 249 -13 22 0 0 0 chr2 64114878 64114900 -186572954 + AT_rich Low_complexity Low_complexity 1 22 0 209 313 33 60 chr2 64115056 64115206 -186572648 - MIR3 SINE MIR -3 205 60 207 410 75 0 chr2 64115582 64115716 -186572138 - L2 LINE L2 -6 3266 3123 2192 135 0 0 chr2 64115807 64116111 -186571743 + AluSx SINE Alu 1 304 -8 1958 144 0 17 chr2 64116174 64116473 -186571381 + AluSx SINE Alu 1 294 -18 1600 233 69 53 chr2 64116565 64117126 -186570728 - MLT1F1 LTR MaLR 0 580 1 306 298 125 65 chr2 64117168 64117648 -186570206 + L2 LINE L2 2422 2930 -384 182 283 0 0 chr2 64117685 64117745 -186570109 + L2 LINE L2 3003 3062 -251 535 251 114 64 chr2 64118010 64118229 -186569625 - MER45C DNA AcHobo 0 953 724 1096 183 4 102 chr2 64118324 64118451 -186569403 - MER45C DNA AcHobo -730 223 130 1609 178 3 11 chr2 64118451 64118737 -186569117 + AluJo SINE Alu 5 288 -24 1096 183 4 102 chr2 64118737 64118855 -186568999 - MER45C DNA AcHobo -823 130 2 181 322 44 11 chr2 64119732 64119822 -186568032 + MIR SINE MIR 49 141 -67 1227 177 43 0 chr2 64119823 64120032 -186567822 - MER20 DNA MER1_type -1 218 1 2489 157 63 14 chr2 64120062 64120344 -186567510 - MLT1C LTR MaLR 0 467 154 1554 129 195 66 chr2 64120344 64120392 -186567462 - MSTA LTR MaLR 0 428 388 2287 104 14 0 chr2 64120392 64120689 -186567165 + AluSx SINE Alu 6 306 -6 1554 129 195 66 chr2 64120689 64121019 -186566835 - MSTA LTR MaLR -40 388 1 2489 157 63 14 chr2 64121019 64121181 -186566673 - MLT1C LTR MaLR -313 154 1 232 286 122 32 chr2 64123137 64123263 -186564591 - MIR SINE MIR -58 150 13 11086 162 20 26 chr2 64123447 64126464 -186561390 - L1MA4 LINE L1 -4 6296 3295 751 295 123 41 chr2 64126555 64127074 -186560780 - L2 LINE L2 -10 3303 2741 337 143 0 0 chr2 64127074 64127123 -186560731 - AluJb SINE Alu -4 298 250 1220 182 19 14 chr2 64127123 64127332 -186560522 - AluJb SINE Alu -94 218 9 656 296 188 28 chr2 64127347 64127709 -186560145 - L2 LINE L2 -570 2744 2325 180 0 0 0 chr2 64127710 64127730 -186560124 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2151 129 0 0 chr2 64127737 64128032 -186559822 - AluSx SINE Alu -17 295 1 305 208 0 73 chr2 64128036 64128132 -186559722 + L1MC4 LINE L1 6604 6692 -1350 927 252 21 12 chr2 64128149 64128397 -186559457 - MLT2F LTR ERVL -303 360 67 237 191 43 0 chr2 64128397 64128444 -186559410 + MER47A DNA MER2_type 1 49 -317 1948 120 29 74 chr2 64128487 64128674 -186559180 + MER47A DNA MER2_type 30 195 -2128 1248 213 103 0 chr2 64128674 64128793 -186559061 + AluJo SINE Alu 1 106 -206 225 0 0 0 chr2 64128793 64128818 -186559036 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 1248 213 103 0 chr2 64128818 64128961 -186558893 + AluJo SINE Alu 106 290 -22 1948 120 29 74 chr2 64128961 64129123 -186558731 + MER47A DNA MER2_type 195 363 -3 379 179 0 51 chr2 64129123 64129194 -186558660 - MLT2F LTR ERVL -596 67 1 962 297 75 8 chr2 64129194 64129554 -186558300 - L2 LINE L2 -995 2319 1936 1152 178 56 34 chr2 64130541 64130744 -186557110 + ORSL DNA AcHobo 1 213 -62 2298 163 85 59 chr2 64130744 64131236 -186556618 - MLT1D LTR MaLR 0 505 1 1152 178 56 34 chr2 64131236 64131301 -186556553 + ORSL DNA AcHobo 213 275 0 303 93 0 0 chr2 64132715 64132758 -186555096 + (CA)n Simple_repeat Simple_repeat 2 44 0 230 352 0 0 chr2 64133714 64133802 -186554052 + (CA)n Simple_repeat Simple_repeat 1 88 0 2142 112 10 0 chr2 64134840 64135134 -186552720 - AluSx SINE Alu -15 297 1 22 70 0 0 chr2 64135670 64135713 -186552141 + GC_rich Low_complexity Low_complexity 1 43 0 917 215 56 0 chr2 64136162 64136357 -186551497 + MER3 DNA MER1_type 4 209 0 378 0 0 0 chr2 64137325 64137367 -186550487 + (TG)n Simple_repeat Simple_repeat 1 42 0 240 235 0 0 chr2 64137515 64137566 -186550288 + L2 LINE L2 3255 3305 -8 1980 124 0 20 chr2 64140228 64140527 -186547327 - AluSx SINE Alu -19 293 1 184 350 75 43 chr2 64143724 64143978 -186543876 + L2 LINE L2 2714 2975 -339 210 171 0 0 chr2 64144693 64144728 -186543126 + A-rich Low_complexity Low_complexity 1 35 0 189 0 0 0 chr2 64147392 64147413 -186540441 + (A)n Simple_repeat Simple_repeat 1 21 0 444 37 0 0 chr2 64148013 64148067 -186539787 + (TG)n Simple_repeat Simple_repeat 2 55 0 242 209 44 11 chr2 64148571 64148662 -186539192 + CT-rich Low_complexity Low_complexity 2 95 0 306 0 0 0 chr2 64148830 64148864 -186538990 + (CA)n Simple_repeat Simple_repeat 1 34 0 243 0 0 0 chr2 64149733 64149760 -186538094 + (T)n Simple_repeat Simple_repeat 1 27 0 186 43 0 0 chr2 64151361 64151384 -186536470 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 27 49 0 0 chr2 64154763 64154804 -186533050 + AT_rich Low_complexity Low_complexity 1 41 0 210 200 44 0 chr2 64154883 64154928 -186532926 - L2 LINE L2 0 3313 3267 2065 112 14 10 chr2 64154946 64155241 -186532613 + AluSx SINE Alu 1 296 -16 180 0 0 0 chr2 64155655 64155675 -186532179 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 359 184 0 31 chr2 64156636 64156734 -186531120 + (CACCAT)n Simple_repeat Simple_repeat 3 97 0 195 139 0 0 chr2 64157522 64157558 -186530296 + (CACCAT)n Simple_repeat Simple_repeat 4 39 0 516 77 33 0 chr2 64158299 64158390 -186529464 + (GA)n Simple_repeat Simple_repeat 1 94 0 207 0 0 0 chr2 64158724 64158747 -186529107 + (TG)n Simple_repeat Simple_repeat 2 24 0 29 78 0 0 chr2 64159286 64159350 -186528504 + AT_rich Low_complexity Low_complexity 1 64 0 661 122 17 0 chr2 64159647 64159762 -186528092 + CT-rich Low_complexity Low_complexity 3 119 0 1983 137 27 0 chr2 64160007 64160300 -186527554 - AluSx SINE Alu -11 301 1 265 267 0 0 chr2 64160466 64160541 -186527313 + A-rich Low_complexity Low_complexity 1 75 0 22 0 0 0 chr2 64163130 64163152 -186524702 + GC_rich Low_complexity Low_complexity 1 22 0 1350 126 0 0 chr2 64163952 64164134 -186523720 + AluSg/x SINE Alu 126 307 -5 602 230 142 15 chr2 64164166 64164427 -186523427 - HAL1 LINE L1 -109 2398 2105 860 158 123 66 chr2 64164428 64164656 -186523198 + MER52A LTR ERV1 1 241 -1514 * 1350 184 7 4 chr2 64164648 64164920 -186522934 + MER52A LTR ERV1 379 651 -1104 423 121 0 0 chr2 64164923 64164981 -186522873 - AluS SINE Alu -254 59 2 1731 158 47 7 chr2 64165185 64165483 -186522371 - AluJo SINE Alu -2 310 1 2224 106 0 10 chr2 64165781 64166083 -186521771 - AluSx SINE Alu -13 299 1 2028 132 14 3 chr2 64166090 64166385 -186521469 - AluSx SINE Alu -14 298 1 2156 97 30 13 chr2 64167592 64167890 -186519964 + AluSx SINE Alu 1 303 -9 1962 148 10 7 chr2 64168848 64169153 -186518701 + AluSx SINE Alu 1 306 -6 2260 88 0 0 chr2 64169406 64169726 -186518128 + AluSq SINE Alu 1 320 0 205 136 45 0 chr2 64171779 64171823 -186516031 + A-rich Low_complexity Low_complexity 5 50 0 1051 101 7 0 chr2 64172892 64173030 -186514824 + AluSq/x SINE Alu 1 139 -174 526 91 0 0 chr2 64173045 64173122 -186514732 + Alu SINE Alu 233 309 -3 49 43 0 0 chr2 64173628 64173698 -186514156 + AT_rich Low_complexity Low_complexity 1 70 0 1036 159 0 18 chr2 64175403 64175573 -186512281 - AluJb SINE Alu -17 295 129 22 0 0 0 chr2 64175575 64175597 -186512257 + AT_rich Low_complexity Low_complexity 1 22 0 1677 199 0 23 chr2 64175749 64176055 -186511799 - AluJo SINE Alu -13 299 1 1806 158 0 35 chr2 64176099 64176274 -186511580 - AluJb SINE Alu -6 306 145 2367 96 0 0 chr2 64176274 64176576 -186511278 - AluSq SINE Alu -11 302 1 1806 158 0 35 chr2 64176576 64176717 -186511137 - AluJb SINE Alu -167 145 1 2314 91 0 3 chr2 64177764 64178061 -186509793 - AluSp SINE Alu -17 296 1 2088 138 0 0 chr2 64178226 64178523 -186509331 - AluSx SINE Alu -15 297 1 222 233 33 17 chr2 64178946 64179006 -186508848 + MIR SINE MIR 81 141 -121 352 295 21 11 chr2 64179123 64179218 -186508636 - MER5A DNA MER1_type -28 161 66 2369 89 0 13 chr2 64179218 64179522 -186508332 - AluSq SINE Alu -13 300 1 836 146 0 29 chr2 64179794 64179931 -186507923 + FLAM_C SINE Alu 1 133 -10 196 30 61 0 chr2 64179956 64179989 -186507865 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3101 42 0 3 chr2 64179991 64180345 -186507509 - L1PA3 LINE L1 -3 6152 5800 1618 157 22 29 chr2 64180345 64180619 -186507235 - AluJb SINE Alu -39 273 2 2055 113 10 10 chr2 64180710 64181011 -186506843 + AluSx SINE Alu 1 301 -11 271 292 92 36 chr2 64181065 64181260 -186506594 - L1MC4a LINE L1 -1759 6049 5844 2070 105 40 0 chr2 64181264 64181560 -186506294 - AluSx SINE Alu -4 308 1 21 0 0 0 chr2 64181845 64181866 -186505988 + AT_rich Low_complexity Low_complexity 1 21 0 2129 129 0 3 chr2 64182500 64182794 -186505060 + AluSx SINE Alu 1 293 -19 1987 134 10 10 chr2 64182799 64183108 -186504746 + AluSx SINE Alu 1 312 0 1584 162 23 36 chr2 64183497 64183799 -186504055 + AluJo SINE Alu 1 298 -14 2266 107 3 0 chr2 64183893 64184201 -186503653 + AluY SINE Alu 1 309 -2 1139 194 48 0 chr2 64184451 64184657 -186503197 - MER58A DNA MER1_type -3 221 6 2408 85 0 0 chr2 64185059 64185364 -186502490 + AluSg1 SINE Alu 1 305 -4 804 175 21 88 chr2 64185555 64185572 -186502282 + AluJo SINE Alu 122 139 -173 1912 101 0 12 chr2 64185572 64185829 -186502025 + AluSx SINE Alu 57 310 -2 804 175 21 88 chr2 64185829 64186005 -186501849 + AluJo SINE Alu 139 302 -10 243 88 0 0 chr2 64186651 64186685 -186501169 + (A)n Simple_repeat Simple_repeat 1 34 0 2123 107 34 0 chr2 64186754 64187045 -186500809 - AluSx SINE Alu -11 301 1 2107 109 3 7 chr2 64187962 64188256 -186499598 - AluSx SINE Alu -19 293 1 1936 141 17 7 chr2 64188754 64189052 -186498802 + AluJb SINE Alu 1 301 -11 212 188 319 0 chr2 64189255 64189324 -186498530 - MIR SINE MIR -109 153 63 924 172 6 12 chr2 64190216 64190379 -186497475 - FRAM SINE Alu -5 171 10 310 122 61 0 chr2 64190638 64190687 -186497167 - MER3 DNA MER1_type 0 209 158 869 142 14 14 chr2 64190688 64190836 -186497018 - L1MB8 LINE L1 -2 6176 6029 1629 192 38 0 chr2 64190852 64190974 -186496880 + AluJo SINE Alu 1 117 -195 307 0 47 0 chr2 64190974 64191017 -186496837 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 1629 192 38 0 chr2 64191017 64191186 -186496668 + AluJo SINE Alu 117 303 -9 9407 123 24 23 chr2 64191191 64191865 -186495989 + Tigger1 DNA MER2_type 2 674 -1744 2310 86 0 7 chr2 64191865 64192156 -186495698 - AluSg SINE Alu -21 289 1 9407 123 24 23 chr2 64192156 64192602 -186495252 + Tigger1 DNA MER2_type 674 1126 -1292 2474 94 0 0 chr2 64192602 64192911 -186494943 + AluSx SINE Alu 1 309 -3 9407 123 24 23 chr2 64192911 64193265 -186494589 + Tigger1 DNA MER2_type 1126 1478 -940 2300 87 3 3 chr2 64193267 64193567 -186494287 + AluSg SINE Alu 1 300 -10 641 147 147 0 chr2 64193567 64193683 -186494171 + Tigger1 DNA MER2_type 2285 2417 -1 2068 111 0 0 chr2 64194690 64194961 -186492893 + AluSx SINE Alu 27 297 -15 795 165 201 6 chr2 64194968 64195132 -186492722 + Charlie1a DNA MER1_type 6 201 -1254 903 27 0 9 chr2 64195132 64195242 -186492612 + AluY SINE Alu 197 305 -6 226 185 15 31 chr2 64195249 64195314 -186492540 + Charlie1a DNA MER1_type 195 258 -1197 2398 199 66 17 chr2 64195317 64195846 -186492008 + Charlie1a DNA MER1_type 418 972 -483 1035 164 208 25 chr2 64195846 64196107 -186491747 + L1MB8 LINE L1 5802 6133 -45 2003 104 14 7 chr2 64196107 64196414 -186491440 + AluSp SINE Alu 3 311 0 1035 164 208 25 chr2 64196414 64196469 -186491385 + L1MB8 LINE L1 6133 6177 -1 2322 158 57 42 chr2 64196854 64197035 -186490819 + Tigger1 DNA MER2_type 927 1104 -1314 1284 261 3 7 chr2 64197035 64197338 -186490516 + AluSx SINE Alu 1 302 0 2322 158 57 42 chr2 64197338 64197700 -186490154 + Tigger1 DNA MER2_type 1104 1478 -940 2300 87 3 3 chr2 64197702 64198002 -186489852 + AluSg SINE Alu 1 300 -10 641 147 147 0 chr2 64198002 64198118 -186489736 + Tigger1 DNA MER2_type 2285 2417 -1 830 117 0 0 chr2 64198972 64199083 -186488771 - AluSq/x SINE Alu -202 111 1 2032 139 0 7 chr2 64199085 64199387 -186488467 - AluJb SINE Alu -12 300 1 1312 178 148 3 chr2 64199388 64199719 -186488135 + Charlie1a DNA MER1_type 1073 1451 -4 605 182 53 120 chr2 64200291 64200516 -186487338 + HAL1 LINE L1 2 211 -2296 226 113 19 19 chr2 64200573 64200626 -186487228 + HAL1 LINE L1 1030 1082 -1425 1841 160 0 20 chr2 64200626 64200926 -186486928 + AluY SINE Alu 1 294 -17 2947 66 14 3 chr2 64201433 64201796 -186486058 + L1PA8 LINE L1 5805 6171 -1 203 286 48 48 chr2 64202142 64202226 -186485628 + L2 LINE L2 3186 3269 -3 543 293 35 47 chr2 64202283 64202515 -186485339 - MIR SINE MIR -23 239 11 296 243 39 39 chr2 64202836 64202939 -186484915 + L1ME4a LINE L1 5952 6054 -67 2164 127 3 0 chr2 64203147 64203447 -186484407 + AluSq SINE Alu 1 301 -12 1260 189 185 0 chr2 64203953 64204207 -186483647 + AluJb SINE Alu 1 301 -1 182 240 110 82 chr2 64204770 64204838 -186483016 + L2 LINE L2 2910 2975 -297 1500 191 0 52 chr2 64204838 64205167 -186482687 - AluJo SINE Alu 0 312 1 182 240 110 82 chr2 64205167 64205244 -186482610 + L2 LINE L2 2975 3059 -213 834 149 16 16 chr2 64205592 64205713 -186482141 - FLAM_A SINE Alu -11 122 2 806 147 7 77 chr2 64206012 64206155 -186481699 + FLAM_C SINE Alu 1 133 0 1404 194 0 55 chr2 64206168 64206457 -186481397 + AluJo SINE Alu 1 273 -39 1915 153 0 29 chr2 64206823 64207131 -186480723 + AluSx SINE Alu 1 299 -13 2082 129 3 0 chr2 64207446 64207741 -186480113 + AluSx SINE Alu 1 296 -16 2125 144 0 0 chr2 64207745 64208044 -186479810 + AluSx SINE Alu 1 299 -13 1088 223 51 69 chr2 64208062 64208167 -186479687 - MER2 DNA MER2_type -1 344 239 1671 184 0 23 chr2 64208167 64208477 -186479377 + AluJo SINE Alu 1 303 -9 451 183 144 29 chr2 64208482 64208619 -186479235 + FLAM_C SINE Alu 1 149 0 2196 117 0 0 chr2 64208622 64208921 -186478933 + AluSx SINE Alu 1 299 -13 1088 223 51 69 chr2 64208921 64209153 -186478701 - MER2 DNA MER2_type -112 233 1 346 259 54 0 chr2 64209394 64209506 -186478348 - Charlie8 DNA MER1_type -2215 202 85 183 80 0 0 chr2 64209833 64209858 -186477996 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1631 247 160 31 chr2 64210329 64211208 -186476646 + L2 LINE L2 2324 3311 -2 2237 103 3 0 chr2 64212161 64212462 -186475392 - AluSx SINE Alu -10 302 1 2434 88 0 3 chr2 64212820 64213126 -186474728 + AluSq SINE Alu 1 305 -8 207 0 0 0 chr2 64213197 64213220 -186474634 + (A)n Simple_repeat Simple_repeat 1 23 0 500 308 78 12 chr2 64213730 64214052 -186473802 + L1ME3A LINE L1 5608 5950 -220 198 167 0 0 chr2 64214304 64214340 -186473514 + (TG)n Simple_repeat Simple_repeat 2 37 0 1671 149 4 14 chr2 64216097 64216404 -186471450 + AluJo SINE Alu 10 313 0 639 184 0 64 chr2 64216433 64216574 -186471280 + FLAM_C SINE Alu 2 133 0 1419 123 23 9 chr2 64216582 64216801 -186471053 + AluSx SINE Alu 1 222 -90 258 158 10 99 chr2 64216854 64216955 -186470899 - 7SLRNA srpRNA srpRNA -219 101 10 227 250 23 34 chr2 64216956 64217044 -186470810 - AluS SINE Alu -214 89 3 26 30 0 0 chr2 64218082 64218115 -186469739 + AT_rich Low_complexity Low_complexity 1 33 0 1891 129 0 17 chr2 64218117 64218439 -186469415 + AluSx SINE Alu 1 317 0 494 341 165 21 chr2 64218523 64218898 -186468956 + L2 LINE L2 2808 3236 -77 214 319 121 25 chr2 64219250 64219407 -186468447 - L3 LINE CR1 -84 1493 1322 1779 150 7 7 chr2 64219431 64219724 -186468130 + AluSx SINE Alu 1 293 -19 1956 140 40 0 chr2 64219765 64220065 -186467789 + AluSx SINE Alu 1 312 0 327 339 8 0 chr2 64220942 64221063 -186466791 - MIR SINE MIR -84 178 57 1766 115 127 0 chr2 64221089 64221349 -186466505 + AluSx SINE Alu 6 298 -14 593 168 27 41 chr2 64221466 64221676 -186466178 - Charlie1 DNA MER1_type -1 2760 2588 812 149 8 0 chr2 64221677 64221798 -186466056 + FLAM_C SINE Alu 11 132 -11 1093 185 35 4 chr2 64221810 64222042 -186465812 - Charlie1 DNA MER1_type -156 2605 2367 803 159 310 0 chr2 64222042 64222268 -186465586 + MER90 LTR ERV1 1 296 -318 1064 228 129 27 chr2 64222308 64222720 -186465134 - MLT1C LTR MaLR -8 459 6 2386 43 0 4 chr2 64223230 64223509 -186464345 - AluY SINE Alu -17 294 17 2411 74 7 0 chr2 64223542 64223838 -186464016 - AluSp SINE Alu -15 298 1 216 0 0 0 chr2 64223838 64223862 -186463992 + (T)n Simple_repeat Simple_repeat 1 24 0 5363 99 1 19 chr2 64223862 64224513 -186463341 + THE1B-int LTR MaLR 863 1501 -79 2403 82 0 0 chr2 64224513 64224807 -186463047 + AluY SINE Alu 1 294 -17 5363 99 1 19 chr2 64224807 64224881 -186462973 + THE1B-int LTR MaLR 1501 1575 -5 2428 103 53 39 chr2 64224885 64225244 -186462610 + THE1B LTR MaLR 1 364 0 1431 164 5 5 chr2 64225244 64225464 -186462390 + AluSg/x SINE Alu 69 288 -24 607 170 13 92 chr2 64225572 64225672 -186462182 + MIR SINE MIR 103 189 -73 2007 125 3 13 chr2 64225672 64225976 -186461878 + AluSx SINE Alu 1 301 -11 607 170 13 92 chr2 64225976 64226028 -186461826 + MIR SINE MIR 189 243 -19 657 100 0 0 chr2 64226180 64226270 -186461584 - THE1C LTR MaLR 0 375 286 1926 109 25 0 chr2 64226272 64226546 -186461308 + AluSx SINE Alu 6 286 -26 1816 116 17 40 chr2 64226557 64226859 -186460995 + AluSg SINE Alu 1 295 -15 1885 151 3 0 chr2 64226952 64227250 -186460604 - AluSq SINE Alu -14 299 1 1982 121 0 0 chr2 64227829 64228130 -186459724 - AluSx SINE Alu 0 301 1 827 130 97 7 chr2 64228173 64228327 -186459527 - AluSg/x SINE Alu -9 300 133 401 275 38 46 chr2 64228327 64228458 -186459396 + MIR3 SINE MIR 31 160 -48 2249 91 0 0 chr2 64228495 64228793 -186459061 - AluSg SINE Alu -12 298 1 253 263 50 10 chr2 64228845 64228944 -186458910 - MER103 DNA DNA -8 158 56 189 0 0 0 chr2 64228971 64228992 -186458862 + (CA)n Simple_repeat Simple_repeat 2 22 0 1631 113 0 131 chr2 64229048 64229392 -186458462 - AluSc SINE Alu -10 299 1 5293 201 59 51 chr2 64229507 64229663 -186458191 - Charlie1a DNA MER1_type -1306 1455 1302 2221 97 0 0 chr2 64229663 64229963 -186457891 + AluY SINE Alu 1 300 -11 5293 201 59 51 chr2 64229963 64230192 -186457662 - Charlie1a DNA MER1_type -1459 1302 1076 2110 130 13 0 chr2 64230192 64230500 -186457354 + AluSq SINE Alu 1 312 -1 5293 201 59 51 chr2 64230500 64230693 -186457161 - Charlie1a DNA MER1_type -1685 1076 886 2121 117 0 3 chr2 64230693 64230993 -186456861 - AluSq SINE Alu -14 299 1 2112 124 0 0 chr2 64231001 64231307 -186456547 - AluY SINE Alu -5 306 1 5293 201 59 51 chr2 64231307 64232131 -186455723 - Charlie1a DNA MER1_type -1881 880 31 2143 116 0 3 chr2 64232220 64232521 -186455333 - AluSx SINE Alu -12 300 1 569 257 0 0 chr2 64232652 64232761 -186455093 + MIR SINE MIR 1 109 -153 2232 95 3 9 chr2 64233348 64233663 -186454191 - AluSq SINE Alu 0 313 1 2346 106 21 26 chr2 64233809 64234186 -186453668 - THE1C LTR MaLR 0 375 1 5075 145 43 15 chr2 64234351 64235279 -186452575 + L1MB8 LINE L1 5234 6178 0 223 278 237 0 chr2 64236283 64236380 -186451474 - L2 LINE L2 -1 3312 3193 651 223 29 29 chr2 64237332 64237507 -186450347 - MER69A DNA AcHobo -2 175 1 844 146 0 29 chr2 64237597 64237734 -186450120 + FLAM_C SINE Alu 1 133 0 549 244 213 0 chr2 64238174 64238338 -186449516 + MIR SINE MIR 36 234 -28 287 231 103 13 chr2 64238360 64238438 -186449416 + L2 LINE L2 3160 3244 -28 297 130 0 0 chr2 64238606 64238652 -186449202 - MADE1 DNA Mariner -34 46 1 365 222 241 0 chr2 64238719 64238827 -186449027 + MER94 DNA DNA 1 134 0 419 299 52 10 chr2 64238905 64239099 -186448755 - L1ME4a LINE L1 -207 5914 5713 2186 109 50 39 chr2 64239902 64240260 -186447594 - THE1B LTR MaLR 0 364 3 1103 195 10 10 chr2 64240528 64240733 -186447121 - MLT1E3 LTR MaLR 0 624 420 527 129 12 0 chr2 64240741 64240826 -186447028 - AluS SINE Alu -3 306 221 904 143 0 0 chr2 64240829 64240962 -186446892 - AluSq/x SINE Alu -179 133 1 525 267 98 62 chr2 64241907 64242132 -186445722 - MIR SINE MIR -29 233 1 396 261 121 32 chr2 64243144 64243273 -186444581 + MIR3 SINE MIR 28 175 -33 1598 84 189 0 chr2 64243273 64243522 -186444332 - AluSx SINE Alu -16 296 1 396 261 121 32 chr2 64243522 64243549 -186444305 + MIR3 SINE MIR 175 198 -10 228 234 0 0 chr2 64243567 64243614 -186444240 - MLT1D LTR MaLR -14 491 445 539 272 98 22 chr2 64243735 64243919 -186443935 + MIR SINE MIR 3 200 -62 216 333 16 8 chr2 64244371 64244494 -186443360 + CT-rich Low_complexity Low_complexity 6 129 0 1664 179 62 45 chr2 64245624 64246026 -186441828 - MLT1C LTR MaLR 0 467 59 510 17 0 0 chr2 64246041 64246100 -186441754 + (TG)n Simple_repeat Simple_repeat 1 59 0 1546 268 82 6 chr2 64246142 64246620 -186441234 + MLT1G1 LTR MaLR 40 553 -42 234 279 29 15 chr2 64246843 64246979 -186440875 - L1M4 LINE L1 -3798 2348 2211 1639 170 32 0 chr2 64246982 64247265 -186440589 - AluJb SINE Alu -20 292 1 209 360 133 23 chr2 64247271 64247535 -186440319 + L2 LINE L2 2621 2913 -401 186 298 70 0 chr2 64247582 64247639 -186440215 - L2 LINE L2 -7 3265 3205 254 322 105 20 chr2 64247802 64247954 -186439900 + L2 LINE L2 2890 3054 -218 204 238 0 0 chr2 64248453 64248495 -186439359 + T-rich Low_complexity Low_complexity 4 45 0 839 169 0 22 chr2 64248506 64248689 -186439165 + CT-rich Low_complexity Low_complexity 2 180 0 276 111 0 0 chr2 64248703 64248739 -186439115 + MER5A DNA MER1_type 154 189 0 1398 108 0 0 chr2 64248911 64249124 -186438730 - L1MA8 LINE L1 -11 6280 6068 332 219 137 55 chr2 64250857 64251003 -186436851 - MER103 DNA DNA -7 159 2 2411 183 40 87 chr2 64252036 64252190 -186435664 - MLT1F1 LTR MaLR 0 567 407 1937 134 16 0 chr2 64252190 64252497 -186435357 - AluSx SINE Alu 0 312 1 2411 183 40 87 chr2 64252497 64252937 -186434917 - MLT1F1 LTR MaLR -160 407 1 585 211 50 19 chr2 64253941 64254102 -186433752 - MER103 DNA DNA 0 166 1 478 271 7 64 chr2 64254132 64254224 -186433630 + L2 LINE L2 3182 3265 -48 840 209 11 11 chr2 64254224 64254401 -186433453 + MER69A DNA AcHobo 1 177 0 478 271 7 64 chr2 64254401 64254448 -186433406 + L2 LINE L2 3265 3313 0 330 162 103 0 chr2 64254472 64254540 -186433314 - MADE1 DNA Mariner 0 80 6 986 299 45 43 chr2 64255099 64255521 -186432333 + MARNA DNA Mariner 31 453 -133 545 280 154 0 chr2 64255615 64255733 -186432121 - MER5B DNA MER1_type -4 174 29 270 0 0 0 chr2 64255733 64255763 -186432091 + (TG)n Simple_repeat Simple_repeat 1 30 0 545 280 154 0 chr2 64255763 64255787 -186432067 - MER5B DNA MER1_type -149 29 10 971 175 189 0 chr2 64256133 64256361 -186431493 - AluJb SINE Alu -2 310 40 676 251 42 54 chr2 64256461 64256700 -186431154 - MIR SINE MIR -18 244 9 244 307 228 0 chr2 64256910 64257037 -186430817 + L2 LINE L2 3109 3264 -8 321 380 12 6 chr2 64257072 64257238 -186430616 + MIR3 SINE MIR 34 200 -8 1816 169 3 10 chr2 64257452 64257765 -186430089 - 7SLRNA srpRNA srpRNA -9 311 1 1954 122 10 0 chr2 64257867 64258163 -186429691 + AluSx SINE Alu 1 299 -13 812 278 106 0 chr2 64258805 64259032 -186428822 - MIR SINE MIR 0 262 12 871 110 0 0 chr2 64259066 64259184 -186428670 + AluSq/x SINE Alu 3 120 -192 814 88 80 0 chr2 64259184 64259309 -186428545 + Alu SINE Alu 174 308 -3 469 262 72 38 chr2 64259889 64260270 -186427584 + LTR33 LTR ERVL 4 448 -73 308 287 0 70 chr2 64260624 64260739 -186427115 - MIR SINE MIR -4 258 152 2357 137 81 31 chr2 64260773 64261195 -186426659 + MSTB2 LTR MaLR 15 457 0 1230 261 189 18 chr2 64261195 64261686 -186426168 + MLT1K LTR MaLR 11 585 -3 263 345 35 0 chr2 64261688 64261775 -186426079 - MIR SINE MIR -150 112 23 1749 249 43 39 chr2 64262002 64262495 -186425359 + MLT1J LTR MaLR 17 511 0 203 224 79 13 chr2 64262827 64262903 -186424951 + L2 LINE L2 2977 3057 -215 365 303 120 11 chr2 64262980 64263155 -186424699 + MIR SINE MIR 19 212 -50 286 60 20 20 chr2 64264064 64264114 -186423740 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 1716 152 13 13 chr2 64265446 64265748 -186422106 - AluSx SINE Alu -1 311 10 1654 156 3 30 chr2 64265765 64265897 -186421957 + AluJb SINE Alu 1 135 -177 2022 117 0 0 chr2 64265897 64266204 -186421650 + AluSx SINE Alu 1 307 0 1654 156 3 30 chr2 64266204 64266371 -186421483 + AluJb SINE Alu 135 293 -19 637 288 116 8 chr2 64266486 64266753 -186421101 + MER102a DNA MER1_type 1 296 -34 273 29 0 0 chr2 64266956 64266990 -186420864 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1171 151 4 26 chr2 64267091 64267323 -186420531 + AluJb SINE Alu 85 311 -1 233 301 39 48 chr2 64267477 64267523 -186420331 + L2 LINE L2 3170 3215 -57 2130 113 21 61 chr2 64267523 64267902 -186419952 - THE1B LTR MaLR 0 364 1 233 301 39 48 chr2 64267902 64267958 -186419896 + L2 LINE L2 3215 3271 -1 621 230 185 5 chr2 64268432 64268654 -186419200 + MIR SINE MIR 1 262 0 442 242 55 0 chr2 64271903 64271994 -186415860 - MER81 DNA DNA -3 111 16 2312 85 0 10 chr2 64272524 64272831 -186415023 + AluY SINE Alu 1 304 -7 2261 128 128 8 chr2 64272908 64273290 -186414564 - MSTA LTR MaLR 0 428 1 255 31 0 0 chr2 64273394 64273426 -186414428 + (TG)n Simple_repeat Simple_repeat 2 33 0 518 202 67 0 chr2 64274204 64274308 -186413546 + L2 LINE L2 3203 3313 0 1551 123 0 0 chr2 64275535 64275738 -186412116 + AluSx SINE Alu 1 203 -109 2143 119 0 3 chr2 64276730 64277024 -186410830 - AluSx SINE Alu -19 293 1 500 209 28 127 chr2 64277212 64277341 -186410513 - L1MD3 LINE L1 0 7995 7855 1732 193 3 0 chr2 64277341 64277631 -186410223 - AluJb SINE Alu -21 291 1 500 209 28 127 chr2 64277631 64277868 -186409986 - L1MD3 LINE L1 -140 7855 6035 1809 140 10 10 chr2 64277945 64278237 -186409617 - MLT1C LTR MaLR 0 467 176 2173 113 0 0 chr2 64278251 64278543 -186409311 - AluSx SINE Alu -19 293 2 2027 125 38 0 chr2 64278813 64279102 -186408752 - AluSx SINE Alu -12 300 1 5330 143 9 21 chr2 64279131 64279998 -186407856 + L1MB4 LINE L1 5287 6163 -17 6679 120 56 40 chr2 64279998 64280445 -186407409 - Tigger3b DNA MER2_type -1797 1231 793 1986 141 0 20 chr2 64280445 64280744 -186407110 + AluSx SINE Alu 1 293 -19 207 0 0 0 chr2 64280747 64280770 -186407084 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 6679 120 56 40 chr2 64280770 64281320 -186406534 - Tigger3b DNA MER2_type -2236 792 205 1629 137 10 68 chr2 64281320 64281612 -186406242 - AluJo SINE Alu -17 295 21 6679 120 56 40 chr2 64281612 64281818 -186406036 - Tigger3b DNA MER2_type -2823 205 4 5330 143 9 21 chr2 64281818 64281855 -186405999 + L1MB4 LINE L1 6163 6180 0 198 244 0 0 chr2 64282020 64282065 -186405789 - L2 LINE L2 -8 3305 3261 207 88 0 0 chr2 64282507 64282541 -186405313 + (GA)n Simple_repeat Simple_repeat 1 34 0 1992 177 8 25 chr2 64283021 64283355 -186404499 + MLT1A1 LTR MaLR 1 330 -35 1991 152 0 3 chr2 64283355 64283657 -186404197 - AluJb SINE Alu -11 301 1 1992 177 8 25 chr2 64283657 64283689 -186404165 + MLT1A1 LTR MaLR 330 361 -4 286 236 71 131 chr2 64283733 64284114 -186403740 + L2 LINE L2 1603 1960 -1354 3022 140 160 130 chr2 64284122 64284318 -186403536 - L1MB3 LINE L1 0 6334 6145 2277 94 0 17 chr2 64284318 64284616 -186403238 - AluSq SINE Alu -20 293 1 3022 140 160 130 chr2 64284616 64284961 -186402893 - L1MB3 LINE L1 -189 6145 5812 207 0 0 0 chr2 64284961 64284984 -186402870 + (TG)n Simple_repeat Simple_repeat 2 24 0 3022 140 160 130 chr2 64284984 64285007 -186402847 - L1MB3 LINE L1 -522 5812 5791 365 58 19 0 chr2 64285007 64285059 -186402795 + (CA)n Simple_repeat Simple_repeat 2 54 0 3022 140 160 130 chr2 64285059 64285081 -186402773 - L1MB3 LINE L1 -543 5791 5771 696 159 0 0 chr2 64285081 64285188 -186402666 - FLAM_C SINE Alu -35 108 2 3022 140 160 130 chr2 64285188 64285540 -186402314 - L1MB3 LINE L1 -563 5771 5254 354 226 65 0 chr2 64285539 64285632 -186402222 - L1MB7 LINE L1 -107 6077 5979 * 444 298 138 14 chr2 64285635 64285924 -186401930 + L2 LINE L2 1968 2292 -1022 327 252 7 59 chr2 64285929 64286064 -186401790 + L2 LINE L2 2535 2662 -652 186 301 73 32 chr2 64286136 64286259 -186401595 + L2 LINE L2 2916 3043 -229 212 222 0 0 chr2 64286395 64286440 -186401414 + L2 LINE L2 3265 3309 -4 635 247 20 0 chr2 64287072 64287218 -186400636 - MIR SINE MIR -67 195 47 488 223 30 11 chr2 64287399 64287557 -186400297 - MIR SINE MIR -62 146 32 834 209 6 13 chr2 64288179 64288337 -186399517 - FRAM SINE Alu -26 150 1 261 0 0 0 chr2 64288826 64288855 -186398999 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 399 205 103 8 chr2 64289960 64290077 -186397777 + MIR SINE MIR 135 262 0 2140 175 51 16 chr2 64290744 64291195 -186396659 + MLT1C LTR MaLR 1 467 0 1467 203 24 21 chr2 64291360 64291651 -186396203 + AluJb SINE Alu 1 292 -20 2225 81 37 17 chr2 64291831 64292127 -186395727 - AluSc SINE Alu -5 304 3 278 159 174 0 chr2 64292664 64292733 -186395121 + L2 LINE L2 3232 3312 -1 359 186 80 87 chr2 64292845 64293021 -186394833 - MIR SINE MIR -1 261 85 1532 193 25 79 chr2 64293896 64294300 -186393554 - MLT1B LTR MaLR 0 390 9 317 62 21 0 chr2 64294575 64294623 -186393231 + (TC)n Simple_repeat Simple_repeat 2 50 0 261 0 0 0 chr2 64294622 64294651 -186393203 + (T)n Simple_repeat Simple_repeat 1 29 0 * 261 0 0 0 chr2 64294818 64294847 -186393007 + (CCG)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr2 64294929 64294957 -186392897 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 64295135 64295165 -186392689 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr2 64295689 64295712 -186392142 + (CCG)n Simple_repeat Simple_repeat 1 23 0 187 28 56 28 chr2 64295855 64295891 -186391963 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 201 216 52 31 chr2 64296279 64296376 -186391478 + (CCCGG)n Simple_repeat Simple_repeat 5 103 0 21 0 0 0 chr2 64299818 64299839 -186388015 + AT_rich Low_complexity Low_complexity 1 21 0 183 162 0 0 chr2 64301544 64301581 -186386273 + (TG)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 64304247 64304268 -186383586 + AT_rich Low_complexity Low_complexity 1 21 0 2391 94 0 3 chr2 64305080 64305387 -186382467 - AluSq SINE Alu -7 306 1 204 67 0 0 chr2 64305688 64305718 -186382136 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 414 0 0 0 chr2 64307141 64307187 -186380667 + (CA)n Simple_repeat Simple_repeat 1 46 0 25 0 0 0 chr2 64308449 64308474 -186379380 + AT_rich Low_complexity Low_complexity 1 25 0 405 0 0 0 chr2 64309349 64309394 -186378460 + (CA)n Simple_repeat Simple_repeat 2 46 0 189 0 0 0 chr2 64309393 64309414 -186378440 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 21 0 0 0 chr2 64310830 64310851 -186377003 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 64310902 64310923 -186376931 + AT_rich Low_complexity Low_complexity 1 21 0 223 224 30 15 chr2 64314738 64314805 -186373049 + CT-rich Low_complexity Low_complexity 1 68 0 183 156 0 0 chr2 64315536 64315568 -186372286 + T-rich Low_complexity Low_complexity 1 32 0 240 100 0 0 chr2 64315712 64315752 -186372102 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 31 26 0 0 chr2 64316600 64316638 -186371216 + AT_rich Low_complexity Low_complexity 1 38 0 183 156 0 0 chr2 64317426 64317458 -186370396 + T-rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr2 64317509 64317535 -186370319 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr2 64317783 64317806 -186370048 + AT_rich Low_complexity Low_complexity 1 23 0 432 299 53 11 chr2 64318715 64318902 -186368952 + MIR SINE MIR 68 262 0 264 307 158 16 chr2 64319137 64319264 -186368590 + MIR SINE MIR 48 192 -70 220 288 0 15 chr2 64319390 64319456 -186368398 - MIR SINE MIR -62 146 82 377 275 66 66 chr2 64322361 64322543 -186365311 + MIR3 SINE MIR 16 197 -11 201 132 0 0 chr2 64323637 64323675 -186364179 + (A)n Simple_repeat Simple_repeat 1 38 0 302 221 0 12 chr2 64324521 64324607 -186363247 + (TA)n Simple_repeat Simple_repeat 2 86 0 756 226 43 50 chr2 64325748 64326027 -186361827 + L1MC5 LINE L1 7654 7930 -31 510 31 0 0 chr2 64327003 64327067 -186360787 + (TG)n Simple_repeat Simple_repeat 1 64 0 405 0 0 0 chr2 64328550 64328595 -186359259 + (CAGG)n Simple_repeat Simple_repeat 2 46 0 23 0 0 0 chr2 64329976 64329999 -186357855 + AT_rich Low_complexity Low_complexity 1 23 0 713 211 0 0 chr2 64330001 64330124 -186357730 - FLAM_C SINE Alu -19 124 2 381 308 49 7 chr2 64330322 64330465 -186357389 - MIR3 SINE MIR -35 173 25 571 321 68 18 chr2 64330926 64331262 -186356592 - L3b LINE CR1 -128 1455 1103 232 311 74 16 chr2 64332644 64332766 -186355088 + L2 LINE L2 3162 3290 -23 192 125 0 0 chr2 64333243 64333275 -186354579 + (T)n Simple_repeat Simple_repeat 1 32 0 2265 97 0 36 chr2 64333452 64333760 -186354094 - AluSx SINE Alu -15 297 1 187 180 120 0 chr2 64334173 64334223 -186353631 - MIR3 SINE MIR -144 64 9 240 244 77 0 chr2 64335757 64335835 -186352019 - MIR SINE MIR -78 130 47 1154 267 139 19 chr2 64337421 64338254 -186349600 - L2 LINE L2 0 3313 2382 180 0 0 0 chr2 64339900 64339920 -186347934 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1037 87 7 0 chr2 64340740 64340890 -186346964 + (TCCCC)n Simple_repeat Simple_repeat 2 152 0 318 50 0 0 chr2 64340892 64340932 -186346922 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 181 402 22 0 chr2 64343053 64343145 -186344709 - MIR SINE MIR -73 135 42 31 0 0 0 chr2 64344273 64344304 -186343550 + AT_rich Low_complexity Low_complexity 1 31 0 277 343 56 21 chr2 64345242 64345385 -186342469 - MIR3 SINE MIR -59 149 2 2359 102 13 0 chr2 64346325 64346629 -186341225 + AluSp SINE Alu 1 308 -5 259 127 0 109 chr2 64346816 64346871 -186340983 + L2 LINE L2 3147 3195 -77 188 217 167 0 chr2 64347119 64347179 -186340675 - MIR SINE MIR -61 147 78 * 400 300 30 65 chr2 64347175 64347375 -186340479 - MIR SINE MIR -48 214 22 379 265 117 18 chr2 64348547 64348685 -186339169 + MIR SINE MIR 2 150 -62 189 213 0 0 chr2 64350484 64350531 -186337323 + (CAT)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr2 64351331 64351352 -186336502 + (GA)n Simple_repeat Simple_repeat 1 21 0 437 223 117 0 chr2 64353363 64353466 -186334388 - MIR SINE MIR -20 242 128 401 305 33 7 chr2 64353724 64353875 -186333979 - MIR3 SINE MIR -39 169 15 1830 255 31 12 chr2 64354788 64355306 -186332548 + L1ME1 LINE L1 5634 6161 -5 267 31 0 0 chr2 64355485 64355517 -186332337 + (GA)n Simple_repeat Simple_repeat 2 33 0 1840 144 37 0 chr2 64355737 64356031 -186331823 - AluJb SINE Alu 0 307 4 2287 109 6 6 chr2 64356425 64356738 -186331116 - AluSq SINE Alu 0 313 1 2358 88 0 0 chr2 64359069 64359392 -186328462 + AluSp SINE Alu 1 323 0 182 143 0 0 chr2 64361999 64362027 -186325827 - L3b LINE CR1 -280 1303 1276 222 290 9 37 chr2 64363700 64363807 -186324047 + GA-rich Low_complexity Low_complexity 4 107 0 262 204 21 11 chr2 64364239 64364332 -186323522 + GA-rich Low_complexity Low_complexity 3 96 0 1575 117 5 14 chr2 64369941 64370163 -186317691 + AluJb SINE Alu 85 304 -8 1202 74 0 12 chr2 64370507 64370670 -186317184 - L1PA7 LINE L1 0 6154 5994 535 242 31 39 chr2 64372209 64372337 -186315517 - MIR3 SINE MIR -47 161 35 425 220 61 38 chr2 64373352 64373484 -186314370 + L2 LINE L2 3179 3313 0 183 100 0 0 chr2 64373491 64373521 -186314333 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 357 296 79 26 chr2 64374800 64374952 -186312902 - L3 LINE CR1 -26 1551 1392 350 280 6 0 chr2 64375028 64375203 -186312651 + (CA)n Simple_repeat Simple_repeat 2 177 0 840 204 33 11 chr2 64376283 64376464 -186311390 - MER5A DNA MER1_type -3 186 2 652 289 18 6 chr2 64377242 64377408 -186310446 + MIR3 SINE MIR 20 187 -21 288 0 0 0 chr2 64377407 64377439 -186310415 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 * 1242 120 0 1 chr2 64380069 64381160 -186306694 + (CCA)n Simple_repeat Simple_repeat 1 1269 0 384 323 35 1 chr2 64382483 64382630 -186305224 - MIR SINE MIR -63 145 42 192 77 0 0 chr2 64382710 64382736 -186305118 + (TAAAA)n Simple_repeat Simple_repeat 5 30 0 271 291 13 0 chr2 64385394 64385473 -186302381 - MIR3 SINE MIR -44 164 85 378 151 0 0 chr2 64386759 64386832 -186301022 + GA-rich Low_complexity Low_complexity 1 73 0 189 0 0 0 chr2 64387945 64387966 -186299888 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 318 148 0 0 chr2 64388014 64388068 -186299786 + (T)n Simple_repeat Simple_repeat 1 54 0 186 133 0 0 chr2 64388273 64388303 -186299551 + (GA)n Simple_repeat Simple_repeat 1 30 0 32 26 0 0 chr2 64389345 64389384 -186298470 + AT_rich Low_complexity Low_complexity 1 39 0 27 49 0 0 chr2 64389773 64389814 -186298040 + AT_rich Low_complexity Low_complexity 1 41 0 246 128 0 0 chr2 64390522 64390561 -186297293 + (A)n Simple_repeat Simple_repeat 1 39 0 194 83 56 0 chr2 64390833 64390869 -186296985 + T-rich Low_complexity Low_complexity 4 41 0 261 0 0 0 chr2 64391569 64391598 -186296256 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 21 36 0 0 chr2 64392864 64392892 -186294962 + AT_rich Low_complexity Low_complexity 1 28 0 258 32 0 0 chr2 64394168 64394199 -186293655 + (TC)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr2 64395153 64395175 -186292679 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr2 64395822 64395863 -186291991 + AT_rich Low_complexity Low_complexity 1 41 0 231 317 87 0 chr2 64397148 64397252 -186290602 - MIR SINE MIR -66 142 30 2061 126 0 10 chr2 64398061 64398370 -186289484 - AluY SINE Alu -5 306 1 2210 88 18 0 chr2 64398664 64398988 -186288866 - AluSg SINE Alu 0 331 3 28 48 0 0 chr2 64399377 64399419 -186288435 + AT_rich Low_complexity Low_complexity 1 42 0 237 200 109 194 chr2 64399937 64400112 -186287742 - MIR3 SINE MIR -13 195 36 2365 102 0 3 chr2 64400582 64400887 -186286967 - AluSx SINE Alu -8 304 1 306 303 64 69 chr2 64402322 64402389 -186285465 - MIR SINE MIR -1 261 195 2381 103 0 0 chr2 64402389 64402689 -186285165 - AluSq SINE Alu -13 300 1 306 303 64 69 chr2 64402689 64402809 -186285045 - MIR SINE MIR -67 195 75 285 279 0 0 chr2 64403154 64403222 -186284632 - L2 LINE L2 0 3272 3205 2486 82 0 3 chr2 64404253 64404557 -186283297 - AluSq SINE Alu -10 303 1 771 148 23 0 chr2 64405136 64405264 -186282590 - FLAM_C SINE Alu -1 132 2 282 95 0 0 chr2 64407381 64407423 -186280431 + (TG)n Simple_repeat Simple_repeat 2 43 0 285 294 83 0 chr2 64410911 64411020 -186276834 - MIR SINE MIR -98 164 47 3631 183 9 37 chr2 64411306 64411638 -186276216 + L1MB4 LINE L1 5440 5780 -400 2256 122 0 3 chr2 64411638 64411950 -186275904 + AluSx SINE Alu 1 311 -1 3631 183 9 37 chr2 64411950 64412378 -186275476 + L1MB4 LINE L1 5780 6179 -1 2217 103 27 7 chr2 64412402 64412703 -186275151 + AluSx SINE Alu 1 307 -5 746 170 144 33 chr2 64413482 64413635 -186274219 + FRAM SINE Alu 1 169 -7 1667 139 66 4 chr2 64413899 64414173 -186273681 - AluJo SINE Alu -15 297 7 235 350 24 8 chr2 64414668 64414791 -186273063 - MIR SINE MIR -102 160 36 203 191 0 0 chr2 64415597 64415639 -186272215 + MIR SINE MIR 104 145 -63 2098 120 0 3 chr2 64416349 64416657 -186271197 - AluSx SINE Alu 0 307 1 353 325 100 0 chr2 64417091 64417211 -186270643 - MIR SINE MIR -112 150 19 22 35 0 0 chr2 64417211 64417240 -186270614 + AT_rich Low_complexity Low_complexity 1 29 0 329 318 113 7 chr2 64418512 64418663 -186269191 + MIR3 SINE MIR 20 186 -22 193 167 0 0 chr2 64418631 64418667 -186269187 + L3 LINE CR1 1528 1563 -14 * 2504 77 7 3 chr2 64418803 64419113 -186268741 - AluSq SINE Alu -2 311 1 426 185 105 80 chr2 64420203 64420365 -186267489 + MLT1J1 LTR MaLR 281 446 0 1298 235 72 16 chr2 64421254 64421629 -186266225 + L1ME4a LINE L1 5539 5934 -187 195 348 65 0 chr2 64421678 64421770 -186266084 + MIR SINE MIR 35 132 -76 1927 116 1 26 chr2 64421944 64421994 -186265860 - MER4A LTR ERV1 -4 660 610 6321 35 0 0 chr2 64421994 64422732 -186265122 - L1PA4 LINE L1 0 6155 5418 1927 116 1 26 chr2 64422732 64423238 -186264616 - MER4A LTR ERV1 -54 610 1 1715 235 70 57 chr2 64423576 64424123 -186263731 - MLT1E LTR MaLR -2 591 34 1687 163 46 3 chr2 64424123 64424405 -186263449 - AluSg SINE Alu -16 294 1 1715 235 70 57 chr2 64424405 64424440 -186263414 - MLT1E LTR MaLR -559 34 1 1906 118 66 109 chr2 64425748 64426216 -186261638 - LTR7 LTR ERV1 -2 448 1 2376 87 70 14 chr2 64426216 64426585 -186261269 - HERVH LTR ERV1 0 7713 7324 396 161 65 0 chr2 64426585 64426647 -186261207 - HERVH LTR ERV1 -1894 5819 5754 3090 102 0 7 chr2 64426652 64427094 -186260760 - HERVH LTR ERV1 -3783 3930 3492 901 142 20 0 chr2 64427084 64427232 -186260622 - HERVH LTR ERV1 -4423 3290 3140 * 14115 98 33 10 chr2 64427226 64430396 -186257458 - HERVH LTR ERV1 -4726 2987 1 2681 83 128 5 chr2 64430398 64430797 -186257057 - LTR7 LTR ERV1 -2 448 1 450 276 105 44 chr2 64431388 64431569 -186256285 + MIR3 SINE MIR 3 194 -14 3451 194 63 43 chr2 64432012 64432486 -186255368 + L1ME1 LINE L1 4567 5030 -1136 2264 82 3 0 chr2 64432486 64432780 -186255074 - AluSp SINE Alu -18 295 1 3451 194 63 43 chr2 64432780 64433851 -186254003 + L1ME1 LINE L1 5030 6134 -32 186 275 62 38 chr2 64434820 64434900 -186252954 - MIR3 SINE MIR -9 199 118 24 0 0 0 chr2 64435211 64435235 -186252619 + AT_rich Low_complexity Low_complexity 1 24 0 246 222 0 28 chr2 64436291 64436363 -186251491 + (CA)n Simple_repeat Simple_repeat 2 71 0 447 358 0 0 chr2 64436380 64436559 -186251295 + (CA)n Simple_repeat Simple_repeat 1 179 0 22 0 0 0 chr2 64436853 64436875 -186250979 + AT_rich Low_complexity Low_complexity 1 22 0 418 262 214 24 chr2 64438162 64438372 -186249482 + MIR SINE MIR 13 262 0 241 280 74 85 chr2 64439064 64439297 -186248557 + MIR SINE MIR 3 234 -28 1153 148 51 55 chr2 64439595 64439812 -186248042 + MER58A DNA MER1_type 1 216 -8 225 108 0 0 chr2 64439976 64440013 -186247841 + (T)n Simple_repeat Simple_repeat 1 37 0 520 303 159 5 chr2 64440044 64440239 -186247615 - MIR SINE MIR -18 244 20 249 33 0 0 chr2 64441902 64441932 -186245922 + (CA)n Simple_repeat Simple_repeat 1 30 0 280 314 96 26 chr2 64442410 64442566 -186245288 + L2 LINE L2 3098 3264 -8 869 74 37 6 chr2 64443452 64443614 -186244240 + (TCTA)n Simple_repeat Simple_repeat 3 169 0 1513 121 0 22 chr2 64443729 64443953 -186243901 - MER20 DNA MER1_type 0 219 1 283 311 44 29 chr2 64444031 64444237 -186243617 - L2 LINE L2 -235 3037 2829 216 0 0 0 chr2 64444343 64444367 -186243487 + (GGGTG)n Simple_repeat Simple_repeat 4 27 0 762 78 0 240 chr2 64444470 64444662 -186243192 - AluSg/x SINE Alu -10 299 154 981 113 7 0 chr2 64444728 64444870 -186242984 - AluSq/x SINE Alu -169 143 1 501 157 83 76 chr2 64445209 64445380 -186242474 + MLT1J1 LTR MaLR 269 402 -7 183 80 0 0 chr2 64445910 64445935 -186241919 + (TG)n Simple_repeat Simple_repeat 1 25 0 2158 127 0 0 chr2 64445993 64446301 -186241553 - AluSq SINE Alu -5 308 1 1948 137 0 10 chr2 64447860 64448174 -186239680 - AluSx SINE Alu -1 311 1 648 311 109 25 chr2 64448303 64448624 -186239230 + L2 LINE L2 2924 3271 -1 2462 71 3 0 chr2 64448754 64449065 -186238789 - AluSp SINE Alu 0 313 2 1577 132 0 0 chr2 64449160 64449388 -186238466 - AluSg1 SINE Alu -81 228 1 247 257 40 34 chr2 64450558 64450706 -186237148 - Charlie7 DNA MER1_type -8 2604 2456 874 199 116 33 chr2 64450775 64450849 -186237005 - Charlie7 DNA MER1_type -118 2494 2428 2183 95 0 3 chr2 64450849 64451144 -186236710 + AluSq SINE Alu 1 294 -19 874 199 116 33 chr2 64451144 64451371 -186236483 - Charlie7 DNA MER1_type -184 2428 2168 665 280 118 34 chr2 64451413 64451599 -186236255 - Charlie7 DNA MER1_type -2286 326 104 2133 235 79 12 chr2 64451599 64452183 -186235671 + MLT1E2 LTR MaLR 1 623 -3 665 280 118 34 chr2 64452183 64452292 -186235562 - Charlie7 DNA MER1_type -2508 104 6 313 346 44 25 chr2 64452741 64452900 -186234954 - MIR SINE MIR -74 188 27 193 261 31 15 chr2 64453866 64453931 -186233923 + L2 LINE L2 2869 2934 -338 28 0 0 0 chr2 64454106 64454134 -186233720 + AT_rich Low_complexity Low_complexity 1 28 0 1275 83 6 0 chr2 64454142 64454311 -186233543 - L1PA8 LINE L1 -13 6159 5990 384 284 82 8 chr2 64454533 64454667 -186233187 + L1ME LINE L1 5663 5806 -356 380 347 0 6 chr2 64454680 64454850 -186233004 + L1ME3A LINE L1 5771 5939 -231 1638 204 24 0 chr2 64454928 64455257 -186232597 + MER58B DNA MER1_type 5 341 0 237 33 0 0 chr2 64455555 64455585 -186232269 + (TC)n Simple_repeat Simple_repeat 1 30 0 504 303 15 20 chr2 64456206 64456401 -186231453 + MIR SINE MIR 24 217 -45 447 208 38 98 chr2 64457163 64457310 -186230544 - MLT1K LTR MaLR -5 583 448 2050 94 28 0 chr2 64457310 64457598 -186230256 - AluSx SINE Alu -16 296 1 447 208 38 98 chr2 64457598 64457633 -186230221 - MLT1K LTR MaLR -140 448 412 1623 188 13 3 chr2 64458481 64458790 -186229064 + AluJb SINE Alu 1 312 0 1554 11 0 0 chr2 64459017 64459197 -186228657 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 203 88 29 0 chr2 64459197 64459231 -186228623 + (TCTCC)n Simple_repeat Simple_repeat 1 35 0 2122 121 3 0 chr2 64459231 64459537 -186228317 - AluSx SINE Alu -5 307 1 551 282 123 22 chr2 64460178 64460405 -186227449 + MIR SINE MIR 4 253 -9 465 324 40 0 chr2 64461834 64462010 -186225844 - MIR SINE MIR -33 229 47 180 0 0 0 chr2 64462566 64462586 -186225268 + (T)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr2 64463446 64463469 -186224385 + AT_rich Low_complexity Low_complexity 1 23 0 1163 101 6 6 chr2 64463469 64463627 -186224227 - U1 snRNA snRNA -7 158 1 360 0 0 0 chr2 64463967 64464007 -186223847 + (TG)n Simple_repeat Simple_repeat 2 41 0 441 283 157 0 chr2 64465296 64465455 -186222399 - MER5A DNA MER1_type -2 187 4 181 368 26 0 chr2 64465455 64465522 -186222332 - MIR3 SINE MIR -43 165 97 2101 95 26 3 chr2 64465966 64466271 -186221583 + AluSx SINE Alu 1 312 0 200 259 17 0 chr2 64466450 64466508 -186221346 + CT-rich Low_complexity Low_complexity 2 60 0 1772 238 60 74 chr2 64466561 64467223 -186220631 + MER77 LTR ERV1 56 670 -6 431 288 163 19 chr2 64467349 64467564 -186220290 + MIR SINE MIR 5 250 -12 1836 138 7 30 chr2 64468392 64468697 -186219157 + AluJb SINE Alu 1 298 -14 565 265 105 39 chr2 64468795 64468976 -186218878 + MIR SINE MIR 14 206 -56 2131 77 49 7 chr2 64468983 64469269 -186218585 + AluSq SINE Alu 6 303 -10 362 316 107 12 chr2 64469724 64469892 -186217962 + MIR SINE MIR 79 262 0 546 258 57 6 chr2 64470374 64470533 -186217321 + MIR SINE MIR 95 261 -1 852 321 41 19 chr2 64471913 64472324 -186215530 + LTR16A LTR ERVL 16 435 -15 261 57 0 0 chr2 64473924 64473959 -186213895 + (TATG)n Simple_repeat Simple_repeat 4 38 0 2161 194 38 6 chr2 64474007 64474486 -186213368 - MER69 DNA AcHobo -96 2430 1937 289 253 13 0 chr2 64474485 64474560 -186213294 - MER69 DNA AcHobo -2450 76 1 * 429 217 33 17 chr2 64474590 64474710 -186213144 - L1MC4 LINE L1 -2 8040 7919 423 65 26 13 chr2 64474741 64474818 -186213036 + (CA)n Simple_repeat Simple_repeat 1 78 0 252 287 0 10 chr2 64474822 64474923 -186212931 - L1MC4 LINE L1 -202 7840 7741 234 207 0 0 chr2 64474985 64475043 -186212811 + CT-rich Low_complexity Low_complexity 5 62 0 403 186 71 53 chr2 64475051 64475164 -186212690 - L1MC4 LINE L1 -1117 6925 6811 312 321 43 29 chr2 64477053 64477193 -186210661 - MIR SINE MIR -64 198 57 207 290 32 16 chr2 64477491 64477553 -186210301 + MIR SINE MIR 37 99 -109 356 279 139 0 chr2 64477586 64477645 -186210209 + MER5A DNA MER1_type 1 50 -139 395 51 0 17 chr2 64477645 64477704 -186210150 + (TG)n Simple_repeat Simple_repeat 2 59 0 356 279 139 0 chr2 64477704 64477809 -186210045 + MER5A DNA MER1_type 50 188 -1 2195 103 0 3 chr2 64479013 64479323 -186208531 + AluSc SINE Alu 1 309 0 284 321 12 0 chr2 64479366 64479447 -186208407 - L3 LINE CR1 -1432 145 64 545 266 128 10 chr2 64480020 64480332 -186207522 - L1ME4a LINE L1 -116 6005 5657 2316 105 0 16 chr2 64480828 64481143 -186206711 - AluSg SINE Alu 0 310 1 187 191 0 21 chr2 64482315 64482362 -186205492 - L2 LINE L2 -212 3060 3015 1799 168 10 0 chr2 64484684 64484976 -186202878 - AluJb SINE Alu -17 295 1 2076 105 39 3 chr2 64485467 64485753 -186202101 - AluSc SINE Alu -13 296 1 192 77 0 0 chr2 64486873 64486899 -186200955 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1996 121 0 30 chr2 64486904 64487202 -186200652 - AluSx SINE Alu -23 289 1 2386 99 0 7 chr2 64491171 64491473 -186196381 + AluSc SINE Alu 2 301 -8 340 115 0 0 chr2 64492374 64492426 -186195428 - L1ME4a LINE L1 -105 6016 5965 754 332 36 0 chr2 64492447 64492697 -186195157 - MIR SINE MIR -2 260 2 488 255 76 42 chr2 64492707 64492970 -186194884 - L1ME4a LINE L1 -157 5964 5693 249 217 0 84 chr2 64492986 64493069 -186194785 - MIR SINE MIR -3 259 184 325 281 88 9 chr2 64493070 64493184 -186194670 - L1ME4a LINE L1 -2123 5685 5563 405 187 131 9 chr2 64493746 64493853 -186194001 - MER115 DNA AcHobo -82 611 492 261 0 0 0 chr2 64495183 64495212 -186192642 + (TG)n Simple_repeat Simple_repeat 2 30 0 346 244 42 17 chr2 64496287 64496406 -186191448 + MIR3 SINE MIR 81 202 -6 517 261 33 33 chr2 64496938 64497091 -186190763 - MIR3 SINE MIR -37 171 19 262 313 0 0 chr2 64497775 64497855 -186189999 - L3 LINE CR1 -18 1559 1480 271 333 42 37 chr2 64498519 64498708 -186189146 - L2 LINE L2 -565 2749 2560 204 40 0 0 chr2 64498769 64498794 -186189060 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 250 277 22 0 chr2 64499078 64499157 -186188697 - MIR SINE MIR -56 152 70 727 240 48 10 chr2 64499227 64499435 -186188419 - MIR SINE MIR 0 262 47 2126 125 20 0 chr2 64499513 64499817 -186188037 + AluSx SINE Alu 1 310 -2 2897 229 77 15 chr2 64500533 64501488 -186186366 - L1ME2 LINE L1 -1 6958 5947 471 293 29 0 chr2 64501499 64501639 -186186215 - MLT1G1 LTR MaLR 0 595 452 1197 233 155 24 chr2 64501639 64502226 -186185628 - L1ME2 LINE L1 -1394 5547 4884 3752 248 49 22 chr2 64502239 64502798 -186185056 - L1ME2 LINE L1 -2465 4476 3934 1674 207 3 3 chr2 64502798 64503107 -186184747 - AluJo SINE Alu -3 309 1 3752 248 49 22 chr2 64503107 64503929 -186183925 - L1ME2 LINE L1 -3007 3934 3057 387 183 0 0 chr2 64503929 64504011 -186183843 + CT-rich Low_complexity Low_complexity 3 84 0 2088 139 0 7 chr2 64504016 64504310 -186183544 - AluSx SINE Alu -20 292 1 1168 243 57 39 chr2 64504325 64504870 -186182984 - L1ME2 LINE L1 -4021 3101 2567 345 24 0 0 chr2 64504870 64504912 -186182942 + (TG)n Simple_repeat Simple_repeat 1 42 0 1168 243 57 39 chr2 64504912 64504984 -186182870 - L1ME2 LINE L1 -4555 2567 2014 630 276 72 53 chr2 64505508 64505571 -186182283 - L1ME2 LINE L1 -6082 341 281 2194 102 6 22 chr2 64505571 64505916 -186181938 + AluSx SINE Alu 1 312 0 630 276 72 53 chr2 64505916 64506171 -186181683 - L1ME2 LINE L1 -6142 281 17 263 295 181 20 chr2 64506646 64506795 -186181059 - MIR SINE MIR -72 190 18 582 278 28 14 chr2 64507550 64507762 -186180092 - MIR SINE MIR -35 227 13 885 255 158 24 chr2 64507839 64508219 -186179635 + MLT1J1 LTR MaLR 8 438 -8 1013 263 59 46 chr2 64508467 64508927 -186178927 - L2 LINE L2 -1 3312 2847 517 343 117 19 chr2 64509633 64510059 -186177795 - LTR67 LTR ERVL -47 510 43 234 314 0 0 chr2 64511825 64511895 -186175959 - L2 LINE L2 -2 3311 3242 242 297 0 0 chr2 64512867 64512931 -186174923 - MIR SINE MIR -123 139 76 284 388 8 0 chr2 64513186 64513315 -186174539 - MIR SINE MIR -113 149 20 258 346 79 21 chr2 64513442 64513682 -186174172 + MIR SINE MIR 1 254 -8 1819 163 0 10 chr2 64513788 64514076 -186173778 - AluJo SINE Alu -25 287 3 1302 181 23 21 chr2 64514269 64514581 -186173273 - MLT2C1 LTR ERVL 0 397 31 253 312 0 40 chr2 64514917 64515042 -186172812 + L2 LINE L2 2420 2539 -775 1239 155 14 32 chr2 64515103 64515201 -186172653 - MER20 DNA MER1_type -2 217 119 2046 172 18 21 chr2 64515201 64515590 -186172264 - MLT1B LTR MaLR 0 390 3 1239 155 14 32 chr2 64515590 64515710 -186172144 - MER20 DNA MER1_type -100 119 3 499 199 123 41 chr2 64515739 64515885 -186171969 - MER5B DNA MER1_type -16 162 5 772 321 82 5 chr2 64515941 64516321 -186171533 - L1ME4a LINE L1 -186 5935 5527 1512 155 8 4 chr2 64516322 64516567 -186171287 - Tigger2 DNA MER2_type 0 2718 2473 4684 136 24 5 chr2 64516627 64517372 -186170482 - Tigger2 DNA MER2_type -1959 759 1 231 259 9 26 chr2 64517447 64517563 -186170291 - L1ME4a LINE L1 -690 5431 5318 21 36 0 0 chr2 64517566 64517594 -186170260 + AT_rich Low_complexity Low_complexity 1 28 0 240 297 68 24 chr2 64517813 64518062 -186169792 - L1ME4a LINE L1 -1085 5061 4802 352 288 118 20 chr2 64518216 64518615 -186169239 - L1ME4a LINE L1 -1572 4574 4133 208 205 24 36 chr2 64519204 64519287 -186168567 + T-rich Low_complexity Low_complexity 4 85 0 220 386 32 29 chr2 64519581 64519827 -186168027 + L2 LINE L2 2693 2939 -375 265 284 14 0 chr2 64519921 64519995 -186167859 + L2 LINE L2 3231 3305 -8 21 36 0 0 chr2 64520463 64520491 -186167363 + AT_rich Low_complexity Low_complexity 1 28 0 190 373 154 0 chr2 64521459 64521569 -186166285 + L2 LINE L2 3116 3242 -30 1525 241 103 20 chr2 64521939 64522423 -186165431 - MLT1F LTR MaLR -23 519 40 623 297 22 30 chr2 64522423 64522692 -186165162 + L1MEd LINE L1 967 1233 -4886 333 0 0 0 chr2 64524624 64524661 -186163193 + (CA)n Simple_repeat Simple_repeat 1 37 0 499 258 8 8 chr2 64525723 64525843 -186162011 + L2 LINE L2 3194 3313 0 207 186 0 0 chr2 64527122 64527165 -186160689 + GA-rich Low_complexity Low_complexity 3 45 0 200 211 19 19 chr2 64527509 64527561 -186160293 + C-rich Low_complexity Low_complexity 2 53 0 376 233 19 19 chr2 64528127 64528230 -186159624 - L2 LINE L2 -10 3303 3201 208 175 0 25 chr2 64529607 64529647 -186158207 + T-rich Low_complexity Low_complexity 3 41 0 204 40 0 0 chr2 64530087 64530112 -186157742 + (TCC)n Simple_repeat Simple_repeat 3 27 0 607 266 33 5 chr2 64532613 64532797 -186155057 + MIR SINE MIR 46 234 -28 222 45 68 0 chr2 64533665 64533709 -186154145 + (CAAA)n Simple_repeat Simple_repeat 3 49 0 2337 118 0 0 chr2 64535532 64535845 -186152009 - AluSq SINE Alu 0 313 1 1727 196 16 21 chr2 64535867 64535935 -186151919 - L1MA10 LINE L1 0 6334 6267 1364 198 64 21 chr2 64535935 64536264 -186151590 + MER2 DNA MER2_type 1 343 -1 1727 196 16 21 chr2 64536264 64536567 -186151287 - L1MA10 LINE L1 -67 6267 5965 716 144 181 19 chr2 64536632 64536780 -186151074 + MER53 DNA DNA 1 178 -11 213 39 0 0 chr2 64536780 64536806 -186151048 + (TTG)n Simple_repeat Simple_repeat 2 27 0 716 144 181 19 chr2 64536806 64536817 -186151037 + MER53 DNA DNA 178 186 -3 2191 122 0 0 chr2 64536930 64537224 -186150630 - AluSq SINE Alu -17 296 3 246 202 43 12 chr2 64537372 64537466 -186150388 - MIR SINE MIR -62 146 104 24 0 0 0 chr2 64538013 64538037 -186149817 + AT_rich Low_complexity Low_complexity 1 24 0 247 184 105 53 chr2 64539037 64539151 -186148703 + MIR SINE MIR 108 227 -35 2365 113 0 0 chr2 64539628 64539938 -186147916 + AluSq SINE Alu 1 310 -3 369 0 0 0 chr2 64539945 64539986 -186147868 + (GAA)n Simple_repeat Simple_repeat 2 42 0 211 163 47 0 chr2 64540391 64540434 -186147420 + CT-rich Low_complexity Low_complexity 4 48 0 180 77 0 0 chr2 64541469 64541495 -186146359 + (CA)n Simple_repeat Simple_repeat 2 27 0 180 333 48 24 chr2 64543241 64543292 -186144562 - L3b LINE CR1 -3 1580 1525 240 111 0 0 chr2 64543292 64543328 -186144526 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 180 333 48 24 chr2 64543328 64543360 -186144494 - L3b LINE CR1 -58 1525 1495 444 240 8 48 chr2 64543806 64543931 -186143923 + L2 LINE L2 3152 3271 -1 402 289 86 21 chr2 64544441 64544628 -186143226 + MIR SINE MIR 63 261 -1 183 193 119 92 chr2 64545203 64545312 -186142542 + L2 LINE L2 2968 3079 -193 25 0 0 0 chr2 64545460 64545485 -186142369 + AT_rich Low_complexity Low_complexity 1 25 0 809 243 68 14 chr2 64545564 64545786 -186142068 - MIR SINE MIR -24 238 5 225 208 38 0 chr2 64545987 64546040 -186141814 + L2 LINE L2 3134 3188 -84 614 190 21 28 chr2 64547550 64547692 -186140162 - MER53 DNA DNA -47 142 2 245 274 14 0 chr2 64548045 64548118 -186139736 + MIR SINE MIR 83 156 -106 359 264 73 9 chr2 64548914 64549024 -186138830 + L2 LINE L2 3197 3313 0 21 0 0 0 chr2 64549263 64549284 -186138570 + AT_rich Low_complexity Low_complexity 1 21 0 256 200 0 0 chr2 64549469 64549514 -186138340 + ORSL DNA AcHobo 231 275 0 346 315 79 11 chr2 64551082 64551260 -186136594 + MIR SINE MIR 73 262 0 780 233 117 25 chr2 64553519 64553759 -186134095 + MIR SINE MIR 1 262 0 2258 113 0 0 chr2 64554164 64554455 -186133399 - AluSc SINE Alu -18 291 1 278 216 39 29 chr2 64554477 64554579 -186133275 + L1 LINE L1 4716 4818 -1328 75 22 0 0 chr2 64554599 64554688 -186133166 + AT_rich Low_complexity Low_complexity 1 89 0 22 0 0 0 chr2 64556127 64556149 -186131705 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 64559073 64559099 -186128755 + AT_rich Low_complexity Low_complexity 1 26 0 1029 190 25 15 chr2 64559486 64559686 -186128168 - MLT1A1 LTR MaLR 0 365 164 956 200 0 0 chr2 64559752 64559917 -186127937 + FAM SINE Alu 1 48 -1 714 185 30 7 chr2 64559917 64560052 -186127802 - MLT1A1 LTR MaLR -227 138 1 310 208 0 0 chr2 64560056 64560128 -186127726 - MIR SINE MIR -65 197 126 194 250 44 29 chr2 64560738 64560806 -186127048 - MIR SINE MIR -73 135 67 1996 103 4 4 chr2 64561156 64561418 -186126436 + AluSq SINE Alu 37 298 -15 517 308 16 5 chr2 64561546 64561731 -186126123 - MIR SINE MIR -61 201 15 797 272 52 8 chr2 64562673 64562923 -186124931 + MIR SINE MIR 2 262 0 185 313 62 0 chr2 64562963 64563043 -186124811 - MIR SINE MIR -118 144 60 2237 117 3 7 chr2 64563189 64563496 -186124358 + AluSq SINE Alu 1 306 -7 232 324 14 0 chr2 64563497 64563568 -186124286 + MER5A DNA MER1_type 66 137 -52 460 299 56 0 chr2 64564879 64565023 -186122831 - MIR SINE MIR -89 173 22 3647 197 39 27 chr2 64566573 64567421 -186120433 - L1MC4a LINE L1 0 7808 6951 310 282 141 0 chr2 64567476 64567625 -186120229 + L2 LINE L2 2596 2765 -549 249 268 108 119 chr2 64567645 64567839 -186120015 - MIR SINE MIR 0 262 71 917 210 76 13 chr2 64568532 64568770 -186119084 - MER46C DNA MER2_type -3 335 83 181 130 65 43 chr2 64568999 64569045 -186118809 - L2 LINE L2 -671 2643 2597 428 248 48 8 chr2 64571671 64571796 -186116058 - LTR33A LTR ERVL 0 523 394 449 240 89 0 chr2 64572053 64572199 -186115655 - LTR50 LTR ERVL -636 159 1 266 0 0 29 chr2 64572310 64572345 -186115509 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 464 338 78 14 chr2 64572358 64572577 -186115277 - L3 LINE CR1 -26 1551 1319 783 186 54 0 chr2 64572746 64572913 -186114941 + L1PB4 LINE L1 5980 6155 -1 801 236 89 64 chr2 64572971 64573331 -186114523 - MLT1J LTR MaLR -130 381 13 322 213 100 0 chr2 64573448 64573528 -186114326 - MER5A DNA MER1_type -86 103 16 339 286 103 0 chr2 64574899 64575025 -186112829 - MIR3 SINE MIR 0 208 70 671 282 41 6 chr2 64575074 64575317 -186112537 - MIR SINE MIR 0 262 19 390 312 32 5 chr2 64575506 64575695 -186112159 - L1ME4a LINE L1 -237 5884 5691 288 0 0 0 chr2 64576851 64576883 -186110971 + (TG)n Simple_repeat Simple_repeat 2 33 0 488 261 43 0 chr2 64577513 64577651 -186110203 - MIR SINE MIR -1 261 118 837 269 84 54 chr2 64578661 64579208 -186108646 + L1MC/D LINE L1 5122 5695 -859 736 198 0 0 chr2 64579208 64579334 -186108520 - FLAM_C SINE Alu -5 128 3 837 269 84 54 chr2 64579334 64579455 -186108399 + L1MC/D LINE L1 5695 5811 -743 370 277 34 8 chr2 64579878 64579997 -186107857 - MER94 DNA DNA -4 130 9 541 273 77 16 chr2 64580164 64580374 -186107480 + MIR SINE MIR 3 232 -30 387 0 0 0 chr2 64581083 64581126 -186106728 + (CAA)n Simple_repeat Simple_repeat 2 44 0 532 275 51 6 chr2 64581423 64581601 -186106253 - MIR SINE MIR 0 262 77 2511 53 3 3 chr2 64581817 64582121 -186105733 - AluY SINE Alu -7 304 1 2180 109 3 7 chr2 64584674 64584978 -186102876 + AluSx SINE Alu 3 305 -7 195 100 0 0 chr2 64586104 64586134 -186101720 + (A)n Simple_repeat Simple_repeat 1 30 0 329 349 56 8 chr2 64588293 64588419 -186099435 + MIR SINE MIR 48 179 -83 817 217 59 51 chr2 64588419 64588672 -186099182 + MER112 DNA MER1_type 2 256 0 677 296 132 22 chr2 64588724 64589095 -186098759 - MLT1J2 LTR MaLR -2 448 37 469 269 8 132 chr2 64589478 64589735 -186098119 - MIR SINE MIR 0 262 38 246 315 91 35 chr2 64590164 64590307 -186097547 + L3b LINE CR1 1314 1464 -119 289 293 27 67 chr2 64591036 64591186 -186096668 + MIR3 SINE MIR 3 146 -62 6760 134 29 8 chr2 64592278 64594334 -186093520 + L1MA5 LINE L1 4198 6297 -3 688 206 62 36 chr2 64594779 64594973 -186092881 + L2 LINE L2 3114 3312 -1 238 252 57 65 chr2 64595653 64595776 -186092078 + MIR SINE MIR 82 203 -59 * 268 267 58 0 chr2 64595766 64595852 -186092002 + L2 LINE L2 3194 3284 -29 270 0 0 0 chr2 64595981 64596011 -186091843 + (CA)n Simple_repeat Simple_repeat 1 30 0 880 100 5 41 chr2 64596173 64596327 -186091527 + (TCTA)n Simple_repeat Simple_repeat 1 159 -438 2162 162 60 30 chr2 64596327 64596728 -186091126 + MLT2D LTR ERVL 1 413 -1 880 100 5 41 chr2 64596728 64596793 -186091061 + (TCTA)n Simple_repeat Simple_repeat 159 597 0 2410 133 40 47 chr2 64597358 64597787 -186090067 + MSTB LTR MaLR 1 426 0 321 92 17 59 chr2 64597869 64597988 -186089866 + (TA)n Simple_repeat Simple_repeat 1 114 0 1931 145 3 0 chr2 64597991 64598281 -186089573 - AluSx SINE Alu -13 299 9 372 277 32 13 chr2 64598367 64598522 -186089332 - L1MC4a LINE L1 -312 5809 5688 188 182 23 0 chr2 64601169 64601213 -186086641 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 967 298 129 9 chr2 64601293 64601642 -186086212 + MLT1I LTR MaLR 19 409 0 270 207 85 24 chr2 64601927 64602009 -186085845 + MER91C DNA MER1_type 1 87 -53 2156 154 21 44 chr2 64602568 64602952 -186084902 + THE1C LTR MaLR 1 375 0 482 258 101 22 chr2 64603254 64603432 -186084422 + MIR3 SINE MIR 10 201 -7 201 377 0 14 chr2 64603650 64603719 -186084135 - MIR SINE MIR -107 101 34 4022 239 56 15 chr2 64603943 64605037 -186082817 + L1ME1 LINE L1 34 1172 -5224 633 137 42 4 chr2 64605045 64605258 -186082596 + AluSx SINE Alu 1 303 -9 2450 135 0 11 chr2 64605423 64605779 -186082075 + THE1B LTR MaLR 1 352 -12 553 230 0 0 chr2 64605779 64605879 -186081975 - FLAM_A SINE Alu -10 132 33 2614 162 69 55 chr2 64605882 64605921 -186081933 - MLT2B2 LTR ERVL -1 514 477 396 0 0 0 chr2 64605921 64605965 -186081889 + (TA)n Simple_repeat Simple_repeat 2 45 0 2614 162 69 55 chr2 64605965 64606430 -186081424 - MLT2B2 LTR ERVL -38 477 3 3760 234 107 15 chr2 64606430 64608084 -186079770 + L1ME1 LINE L1 1986 3742 -2473 4729 137 12 26 chr2 64608084 64608852 -186079002 - HSMAR2 DNA Mariner -545 757 1 2177 242 62 37 chr2 64608854 64609397 -186078457 + L1ME1 LINE L1 3848 4376 -1839 1713 132 20 138 chr2 64609397 64609746 -186078108 + AluYb8 SINE Alu 1 308 0 845 141 96 45 chr2 64609747 64609928 -186077926 + AluJo/FRAM SINE Alu 137 302 0 2177 242 62 37 chr2 64609928 64610175 -186077679 + L1ME1 LINE L1 4375 4660 -1555 3075 239 34 34 chr2 64610185 64611089 -186076765 + L1ME1 LINE L1 5327 6230 -5 3159 36 0 0 chr2 64611139 64611495 -186076359 - L1PA8 LINE L1 -8 6164 5809 24 32 0 0 chr2 64611504 64611535 -186076319 + AT_rich Low_complexity Low_complexity 1 31 0 7751 47 0 9 chr2 64611597 64612910 -186074944 + L1PA5 LINE L1 4848 6153 -1 329 287 14 50 chr2 64613036 64613171 -186074683 - MER5A DNA MER1_type -65 113 1 526 265 137 30 chr2 64613756 64614092 -186073762 + L2 LINE L2 2867 3238 -75 758 295 71 44 chr2 64615095 64616725 -186071129 - L1MEc LINE L1 -3675 2540 868 366 339 8 8 chr2 64617310 64617428 -186070426 + MIR3 SINE MIR 65 182 -26 180 77 0 0 chr2 64617911 64617937 -186069917 + (CA)n Simple_repeat Simple_repeat 2 27 0 940 213 0 46 chr2 64618188 64618404 -186069450 + MIR SINE MIR 16 221 -41 1644 224 141 11 chr2 64619207 64619654 -186068200 - MLT1D LTR MaLR 0 505 1 226 270 0 32 chr2 64619822 64619885 -186067969 - L2 LINE L2 -15 3298 3238 650 200 77 7 chr2 64620101 64620256 -186067598 - MER5B DNA MER1_type -4 174 9 552 308 42 23 chr2 64620282 64620496 -186067358 + MIR SINE MIR 32 249 -13 243 366 10 20 chr2 64620519 64620620 -186067234 - MIR SINE MIR -118 144 45 3233 113 148 30 chr2 64620863 64621369 -186066485 + MER61E LTR ERV1 1 566 -3 1710 231 81 27 chr2 64621375 64621820 -186066034 + MLT1D LTR MaLR 36 504 -1 347 235 0 12 chr2 64622945 64623026 -186064828 + HsTC2 DNA Tc2 1 80 -1818 279 184 0 0 chr2 64623040 64623089 -186064765 - MLT2C2 LTR ERVL 0 520 472 24 53 0 0 chr2 64623112 64623150 -186064704 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr2 64623199 64623221 -186064633 + (TA)n Simple_repeat Simple_repeat 2 23 0 2181 195 26 0 chr2 64623272 64623661 -186064193 - MLT2C2 LTR ERVL -59 405 7 273 341 16 54 chr2 64624719 64624848 -186063006 + L2 LINE L2 3116 3239 -33 620 281 30 43 chr2 64625176 64625411 -186062443 + MIR SINE MIR 31 262 0 22 0 0 0 chr2 64626300 64626322 -186061532 + AT_rich Low_complexity Low_complexity 1 22 0 273 273 52 110 chr2 64626365 64626519 -186061335 - MIR SINE MIR -50 212 68 672 246 54 30 chr2 64626529 64626732 -186061122 - MIR SINE MIR -26 236 29 410 294 138 6 chr2 64628403 64628563 -186059291 - MIR3 SINE MIR -24 184 4 195 271 0 0 chr2 64628627 64628697 -186059157 + (TA)n Simple_repeat Simple_repeat 2 71 0 255 213 53 53 chr2 64629552 64629627 -186058227 + L2 LINE L2 3239 3313 0 499 246 165 71 chr2 64629690 64629917 -186057937 - MLT1I LTR MaLR 0 409 146 2215 92 44 0 chr2 64629917 64630210 -186057644 + AluSp SINE Alu 1 306 -7 499 246 165 71 chr2 64630210 64630279 -186057575 - MLT1I LTR MaLR -263 146 85 185 353 88 10 chr2 64630472 64630574 -186057280 - MIR SINE MIR -77 131 22 374 320 59 11 chr2 64630755 64630956 -186056898 + MIR SINE MIR 21 229 -33 323 155 274 0 chr2 64631162 64631246 -186056608 - MLT1I LTR MaLR 0 409 303 324 315 61 42 chr2 64636126 64636291 -186051563 - MIR SINE MIR -6 256 89 255 270 95 14 chr2 64636825 64636899 -186050955 + MIR SINE MIR 19 98 -110 263 309 195 13 chr2 64637151 64637300 -186050554 - MER5A DNA MER1_type -1 188 13 358 314 117 59 chr2 64637523 64637677 -186050177 + MIR SINE MIR 44 207 -1 452 250 0 0 chr2 64637886 64637986 -186049868 + MER112 DNA MER1_type 65 164 -96 203 259 37 19 chr2 64638057 64638111 -186049743 - L3 LINE CR1 -90 1487 1433 378 283 46 46 chr2 64639317 64639469 -186048385 + MIR3 SINE MIR 51 202 -6 207 100 0 0 chr2 64640129 64640159 -186047695 + (A)n Simple_repeat Simple_repeat 1 30 0 30741 112 17 25 chr2 64640461 64645031 -186042823 + L1PA7 LINE L1 8 4593 -1876 3410 28 0 0 chr2 64645031 64645425 -186042429 - L1PA2 LINE L1 0 6155 5762 30741 112 17 25 chr2 64645425 64647247 -186040607 + L1PA7 LINE L1 4593 6428 -41 1109 202 32 32 chr2 64647984 64648232 -186039622 - MLT1B LTR MaLR -142 248 1 427 311 78 12 chr2 64649121 64649443 -186038411 - L1ME3A LINE L1 -220 5950 5608 184 233 122 22 chr2 64649647 64649737 -186038117 + MIR SINE MIR 103 201 -61 207 0 0 0 chr2 64649952 64649975 -186037879 + (T)n Simple_repeat Simple_repeat 1 23 0 539 158 8 8 chr2 64650046 64650173 -186037681 - AluSp/q SINE Alu -8 305 179 382 323 88 44 chr2 64651154 64651541 -186036313 + L2 LINE L2 2865 3268 -4 1717 174 7 0 chr2 64652317 64652616 -186035238 - AluJb SINE Alu -11 301 1 1729 168 10 16 chr2 64652658 64652961 -186034893 - AluJo SINE Alu -11 301 1 383 305 59 44 chr2 64653269 64653472 -186034382 - MIR SINE MIR -44 218 13 246 264 121 3 chr2 64653485 64653622 -186034232 - MIR SINE MIR -64 144 17 190 206 95 48 chr2 64653885 64653948 -186033906 + MER5A DNA MER1_type 49 114 -75 1467 144 79 29 chr2 64654283 64654561 -186033293 - AluJb SINE Alu -20 292 1 2196 100 3 3 chr2 64655158 64655469 -186032385 + AluSx SINE Alu 1 311 -1 187 274 77 83 chr2 64655650 64655818 -186032036 - L2 LINE L2 -1292 2022 1856 534 215 3 83 chr2 64656074 64656206 -186031648 + MLT1F LTR MaLR 1 112 -455 1944 121 7 33 chr2 64656206 64656322 -186031532 + AluSx SINE Alu 1 119 -193 2147 113 7 0 chr2 64656322 64656632 -186031222 + AluSp SINE Alu 1 312 -1 1944 121 7 33 chr2 64656632 64656821 -186031033 + AluSx SINE Alu 119 298 -14 534 215 3 83 chr2 64656821 64656891 -186030963 + MLT1F LTR MaLR 112 186 -381 3193 155 73 144 chr2 64656909 64657325 -186030529 - MER21A LTR ERV1 -19 912 595 1616 134 35 0 chr2 64657325 64657579 -186030275 - AluSq SINE Alu -50 263 1 3193 155 73 144 chr2 64657579 64658070 -186029784 - MER21A LTR ERV1 -336 595 70 335 172 0 0 chr2 64658184 64658242 -186029612 - MER21A LTR ERV1 -861 70 13 972 218 78 11 chr2 64658277 64658569 -186029285 + MLT1F LTR MaLR 170 540 -2 1079 136 131 20 chr2 64658580 64658779 -186029075 + AluJb SINE Alu 1 221 -91 543 272 102 21 chr2 64658783 64659018 -186028836 - L2 LINE L2 -905 2409 2156 500 128 13 0 chr2 64659120 64659198 -186028656 + AluJb SINE Alu 223 301 -11 1197 251 84 32 chr2 64660515 64661016 -186026838 + L2 LINE L2 2175 2701 -613 800 118 7 49 chr2 64661024 64661168 -186026686 - FLAM_C SINE Alu 0 143 6 2040 110 0 0 chr2 64661181 64661489 -186026365 - AluSc SINE Alu 0 308 1 461 275 42 28 chr2 64661492 64661634 -186026220 + L2 LINE L2 2693 2836 -478 2060 107 7 13 chr2 64661653 64661953 -186025901 + AluSx SINE Alu 1 298 -14 881 207 42 73 chr2 64661966 64662227 -186025627 - L1MB8 LINE L1 -6 6172 5920 975 309 63 11 chr2 64662643 64663009 -186024845 + LTR16A LTR ERVL 61 445 -5 1739 165 7 10 chr2 64663684 64663981 -186023873 + AluJo SINE Alu 5 300 -12 563 238 6 94 chr2 64664001 64664182 -186023672 - MIR SINE MIR -28 234 70 414 165 0 0 chr2 64664866 64664945 -186022909 - AluJb SINE Alu 0 312 234 3647 157 43 47 chr2 64664945 64665712 -186022142 - LTR1B LTR ERV1 -1 784 3 1420 175 0 0 chr2 64665712 64665952 -186021902 - AluJb SINE Alu -72 240 1 713 153 163 61 chr2 64666090 64666286 -186021568 - MER106A DNA MER1_type -3 233 18 2059 113 3 0 chr2 64666301 64666585 -186021269 - AluSg SINE Alu -25 285 1 1517 226 90 53 chr2 64666754 64667264 -186020590 + L1ME3 LINE L1 5626 6154 -8 1726 173 14 54 chr2 64667430 64667551 -186020303 - MER4D LTR ERV1 0 903 779 2312 82 0 3 chr2 64667551 64667857 -186019997 + AluSx SINE Alu 1 305 -7 1726 173 14 54 chr2 64667857 64668105 -186019749 - MER4D LTR ERV1 -124 779 549 1478 170 56 0 chr2 64668135 64668405 -186019449 - MER49 LTR ERV1 -638 285 1 598 225 60 0 chr2 64668778 64668929 -186018925 + MIR SINE MIR 63 222 -40 363 172 23 58 chr2 64668929 64669016 -186018838 - MER34 LTR ERV1 -1 541 458 907 161 33 115 chr2 64669038 64669153 -186018701 - MER34B LTR ERV1 -332 233 147 1989 119 0 47 chr2 64669153 64669471 -186018383 + AluSq SINE Alu 1 303 -10 907 161 33 115 chr2 64669471 64669598 -186018256 - MER34B LTR ERV1 -418 147 11 330 297 11 22 chr2 64669700 64669791 -186018063 - L2 LINE L2 -2 3270 3181 190 330 66 19 chr2 64670013 64670119 -186017735 - L2 LINE L2 -3 3269 3159 2168 95 0 13 chr2 64670243 64670610 -186017244 - AluSx SINE Alu 0 363 1 731 238 17 28 chr2 64671256 64671437 -186016417 + MER63A DNA MER1_type 32 210 0 2350 130 19 53 chr2 64671602 64671825 -186016029 + MER57A LTR ERV1 1 205 -198 2177 119 0 0 chr2 64671825 64672136 -186015718 - AluSx SINE Alu -1 311 1 2350 130 19 53 chr2 64672136 64672327 -186015527 + MER57A LTR ERV1 205 401 -2 1776 162 3 3 chr2 64672409 64672706 -186015148 - AluJb SINE Alu -15 297 1 2148 104 0 0 chr2 64672840 64673138 -186014716 - AluSx SINE Alu -13 299 2 214 250 33 17 chr2 64673182 64673242 -186014612 + L2 LINE L2 3137 3197 -75 294 289 33 22 chr2 64673646 64673736 -186014118 - MER91A DNA MER1_type -82 114 24 373 231 50 25 chr2 64673761 64673921 -186013933 - L2 LINE L2 -314 2999 2836 1737 143 13 19 chr2 64674338 64674652 -186013202 - AluJo SINE Alu 0 312 1 287 328 91 37 chr2 64674819 64675285 -186012569 - L2 LINE L2 -25 3247 2753 515 239 86 95 chr2 64675355 64675682 -186012172 - MLT1J LTR MaLR -151 360 37 586 317 102 0 chr2 64675682 64675928 -186011926 - L2 LINE L2 -977 2337 2067 1495 153 4 20 chr2 64676756 64677010 -186010844 - 7SLRNA srpRNA srpRNA -4 316 67 223 152 63 0 chr2 64677384 64677463 -186010391 + (TA)n Simple_repeat Simple_repeat 2 85 0 511 161 0 0 chr2 64678460 64678547 -186009307 + AluJ/FRAM SINE Alu 214 300 -12 628 160 14 0 chr2 64678580 64678697 -186009157 + MIR SINE MIR 49 167 -58 296 323 103 53 chr2 64678795 64679136 -186008718 + L2 LINE L2 2915 3272 0 1966 97 3 21 chr2 64680187 64680574 -186007280 + AluSx SINE Alu 1 382 0 232 278 40 98 chr2 64680618 64680774 -186007080 + MIR SINE MIR 6 154 -62 809 160 8 0 chr2 64681504 64681635 -186006219 - MER20 DNA MER1_type -4 215 84 366 297 91 24 chr2 64681899 64682064 -186005790 - MER69A DNA AcHobo 0 177 2 203 253 27 40 chr2 64682794 64682869 -186004985 - MIR SINE MIR 0 262 189 1093 209 46 112 chr2 64683075 64683260 -186004594 + MER39 LTR ERV1 8 204 -503 2373 108 0 0 chr2 64683260 64683567 -186004287 - AluSx SINE Alu 0 312 6 1093 209 46 112 chr2 64683567 64683905 -186003949 + MER39 LTR ERV1 204 695 -12 2391 97 0 0 chr2 64684062 64684360 -186003494 + AluSx SINE Alu 2 299 -13 248 242 16 0 chr2 64684702 64684764 -186003090 - MER5A DNA MER1_type -75 114 52 561 230 24 0 chr2 64684784 64684910 -186002944 - MER5A DNA MER1_type 0 189 61 2176 131 0 0 chr2 64684911 64685217 -186002637 + AluSx SINE Alu 1 306 -6 617 196 9 0 chr2 64685282 64685389 -186002465 - FLAM_C SINE Alu -34 109 2 2570 50 10 0 chr2 64685399 64685699 -186002155 - AluY SINE Alu -8 303 1 187 200 0 0 chr2 64685700 64685735 -186002119 - MER5A DNA MER1_type -114 75 41 377 204 165 0 chr2 64686304 64686407 -186001447 - MER5B DNA MER1_type -58 120 1 956 132 31 0 chr2 64686551 64686710 -186001144 - MER5A DNA MER1_type 0 189 26 2203 98 40 0 chr2 64686838 64687134 -186000720 + AluSx SINE Alu 1 308 -4 251 151 279 12 chr2 64688242 64688328 -185999526 - MER5B DNA MER1_type 0 178 70 916 203 0 21 chr2 64688348 64688535 -185999319 - FRAM SINE Alu 0 176 1 292 173 27 40 chr2 64688537 64688612 -185999242 - L1ME3A LINE L1 -8 6162 6089 * 1147 255 57 5 chr2 64688607 64688908 -185998946 - L1ME LINE L1 -315 5840 5509 194 254 36 0 chr2 64688949 64689004 -185998850 + MER5B DNA MER1_type 120 176 -2 295 258 77 47 chr2 64689092 64689240 -185998614 - MIR SINE MIR -61 147 34 408 293 138 11 chr2 64689561 64689749 -185998105 + MIR SINE MIR 40 251 -11 1731 154 3 45 chr2 64689752 64690063 -185997791 - AluJo SINE Alu -14 298 1 2939 225 91 79 chr2 64690111 64690194 -185997660 + L2 LINE L2 1603 1683 -1630 2157 138 0 0 chr2 64690194 64690491 -185997363 - AluJb SINE Alu -15 297 1 2939 225 91 79 chr2 64690491 64690606 -185997248 + L2 LINE L2 1683 1795 -1518 371 0 0 63 chr2 64690606 64690669 -185997185 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 1750 107 8 0 chr2 64690672 64690915 -185996939 - AluSp SINE Alu -30 283 39 2939 225 91 79 chr2 64690915 64691289 -185996565 + L2 LINE L2 1796 2164 -1149 2014 132 7 0 chr2 64691289 64691593 -185996261 - AluSx SINE Alu 0 306 1 2939 225 91 79 chr2 64691593 64691872 -185995982 + L2 LINE L2 2164 2438 -875 383 100 15 0 chr2 64691872 64691935 -185995919 - AluSp/q SINE Alu -85 218 168 2939 225 91 79 chr2 64691935 64692401 -185995453 + L2 LINE L2 2438 3006 -307 958 147 39 0 chr2 64692403 64692559 -185995295 - AluSg/x SINE Alu -5 307 146 1660 70 0 0 chr2 64692559 64692759 -185995095 - AluSq SINE Alu -113 200 1 185 188 83 0 chr2 64692759 64692807 -185995047 + L2 LINE L2 3010 3061 -252 379 293 6 25 chr2 64692880 64693037 -185994817 + L2 LINE L2 3160 3313 0 272 200 0 0 chr2 64693273 64693323 -185994531 + PABL_B LTR ERV1 1 50 -617 738 185 13 19 chr2 64693801 64693958 -185993896 + PABL_B LTR ERV1 512 667 0 2140 113 0 46 chr2 64694237 64694564 -185993290 + AluSx SINE Alu 1 312 0 2016 206 142 31 chr2 64694985 64695562 -185992292 - MER115 DNA AcHobo -41 652 12 2291 112 3 0 chr2 64695823 64696127 -185991727 - AluSx SINE Alu -7 305 1 203 175 0 0 chr2 64696993 64697033 -185990821 + A-rich Low_complexity Low_complexity 1 40 0 243 88 0 0 chr2 64697052 64697086 -185990768 + (TG)n Simple_repeat Simple_repeat 2 35 0 21 36 0 0 chr2 64697086 64697114 -185990740 + AT_rich Low_complexity Low_complexity 1 28 0 811 156 7 22 chr2 64697184 64697319 -185990535 - FLAM_C SINE Alu 0 133 1 183 156 0 0 chr2 64697918 64697950 -185989904 + A-rich Low_complexity Low_complexity 1 32 0 186 43 0 0 chr2 64697957 64697980 -185989874 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 243 276 77 82 chr2 64698575 64698745 -185989109 - MER91A DNA MER1_type 0 196 28 251 265 171 34 chr2 64698775 64699103 -185988751 + L2 LINE L2 1816 2188 -1126 712 237 83 0 chr2 64699960 64700116 -185987738 - MER5A DNA MER1_type -4 185 17 1619 177 6 37 chr2 64700513 64700835 -185987019 + AluJo SINE Alu 1 312 0 2319 115 0 6 chr2 64700838 64701152 -185986702 + AluSx SINE Alu 1 312 0 480 229 38 0 chr2 64702531 64702636 -185985218 - L2 LINE L2 -13 3300 3192 1922 130 0 18 chr2 64702742 64703019 -185984835 + AluSx SINE Alu 1 272 -40 373 216 121 35 chr2 64703079 64703195 -185984659 - MER63 DNA MER1_type -309 753 2 2526 67 0 0 chr2 64703314 64703613 -185984241 - AluY SINE Alu -12 299 1 446 231 0 100 chr2 64704037 64704167 -185983687 + LTR67 LTR ERVL 96 212 -345 498 260 0 8 chr2 64704265 64704392 -185983462 + LTR67 LTR ERVL 432 557 0 845 213 60 13 chr2 64704678 64704913 -185982941 - HsTC2 DNA Tc2 -56 1842 1597 2345 108 0 0 chr2 64704921 64705227 -185982627 - AluSq SINE Alu -7 306 1 236 216 204 0 chr2 64705355 64705443 -185982411 - L1MD3 LINE L1 0 7995 7890 665 125 36 0 chr2 64705461 64705573 -185982281 - L1MB7 LINE L1 -19 6165 6050 489 134 9 62 chr2 64705612 64705724 -185982130 - L1MB7 LINE L1 -121 6063 5958 552 239 69 31 chr2 64705725 64705884 -185981970 - HsTC2 DNA Tc2 -276 1622 1282 381 198 188 0 chr2 64705883 64705979 -185981875 - HsTC2 DNA Tc2 -1755 143 30 * 838 155 0 0 chr2 64705981 64706110 -185981744 + FLAM_A SINE Alu 1 129 -4 996 203 111 88 chr2 64706619 64707086 -185980768 + LTR33 LTR ERVL 34 511 -10 188 67 33 0 chr2 64707126 64707156 -185980698 + (TCTCC)n Simple_repeat Simple_repeat 2 32 0 1744 170 106 23 chr2 64707259 64707654 -185980200 - MSTA LTR MaLR 0 428 1 523 260 101 114 chr2 64707854 64708605 -185979249 + L2 LINE L2 2230 2970 -344 370 309 8 0 chr2 64708730 64708856 -185978998 + L2 LINE L2 3187 3313 0 240 275 198 0 chr2 64708870 64708961 -185978893 + MIR3 SINE MIR 99 207 -1 234 0 0 0 chr2 64709022 64709048 -185978806 + (T)n Simple_repeat Simple_repeat 1 26 0 1246 213 88 60 chr2 64709472 64709499 -185978355 + MLT1C LTR MaLR 97 122 -345 2374 97 0 3 chr2 64709499 64709808 -185978046 + AluSx SINE Alu 1 308 -4 1246 213 88 60 chr2 64709808 64710133 -185977721 + MLT1C LTR MaLR 122 459 -8 1573 164 38 32 chr2 64710171 64710494 -185977360 + MER58D DNA MER1_type 1 328 -2092 2743 94 5 0 chr2 64710494 64710867 -185976987 + THE1C LTR MaLR 1 375 0 1573 164 38 32 chr2 64710867 64710885 -185976969 + MER58D DNA MER1_type 328 344 -42 1199 153 19 56 chr2 64710885 64711101 -185976753 - AluJo SINE Alu -19 293 86 245 191 0 0 chr2 64711102 64711149 -185976705 + MER58D DNA MER1_type 339 385 -1 1146 143 94 61 chr2 64711280 64711579 -185976275 - L1MB8 LINE L1 0 6178 5862 1030 216 32 35 chr2 64712181 64712672 -185975182 - MLT1G LTR MaLR 0 567 10 795 209 6 18 chr2 64712675 64712838 -185975016 + AluJb SINE Alu 131 291 -21 24 32 0 0 chr2 64712838 64712869 -185974985 + AT_rich Low_complexity Low_complexity 1 31 0 740 243 114 47 chr2 64713410 64713585 -185974269 - MLT1L LTR MaLR -14 601 402 2065 135 7 0 chr2 64713585 64713881 -185973973 - AluSx SINE Alu -14 298 1 740 243 114 47 chr2 64713881 64713960 -185973894 - MLT1L LTR MaLR -213 402 330 1505 160 117 52 chr2 64714013 64714356 -185973498 - MLT1A1 LTR MaLR 0 365 1 2084 107 0 4 chr2 64714381 64714652 -185973202 + AluSx SINE Alu 27 296 -16 2270 104 0 3 chr2 64714753 64715051 -185972803 - AluSx SINE Alu -15 297 1 2171 112 0 26 chr2 64715125 64715438 -185972416 + AluSc SINE Alu 1 305 -4 2083 127 0 0 chr2 64715883 64716175 -185971679 - AluSx SINE Alu -20 292 1 1463 236 116 21 chr2 64716193 64716677 -185971177 + L1ME3A LINE L1 5541 6070 -100 635 172 34 133 chr2 64716680 64716913 -185970941 + MER67A LTR ERV1 3 212 -331 1828 209 103 54 chr2 64717225 64717457 -185970397 - MER20B DNA MER1_type -4 779 560 1923 144 3 10 chr2 64717457 64717756 -185970098 + AluJo SINE Alu 1 297 -15 1828 209 103 54 chr2 64717756 64717843 -185970011 - MER20B DNA MER1_type -223 560 479 2167 129 0 0 chr2 64717843 64718145 -185969709 - AluSx SINE Alu -9 303 2 1828 209 103 54 chr2 64718145 64718417 -185969437 - MER20B DNA MER1_type -304 479 158 346 285 8 32 chr2 64718421 64718496 -185969358 + L2 LINE L2 2921 2993 -320 2422 79 3 3 chr2 64718496 64718800 -185969054 - AluSg1 SINE Alu -5 304 1 346 285 8 32 chr2 64718800 64718847 -185969007 + L2 LINE L2 2993 3040 -273 813 192 76 45 chr2 64718847 64719071 -185968783 + MER67C LTR ERV1 66 296 -414 610 200 45 91 chr2 64719125 64719345 -185968509 + MER67C LTR ERV1 498 707 -3 264 298 46 30 chr2 64719435 64719566 -185968288 + MIR SINE MIR 20 152 -110 216 198 23 35 chr2 64720297 64720383 -185967471 + G-rich Low_complexity Low_complexity 1 85 0 2449 53 0 17 chr2 64721310 64721611 -185966243 + AluSx SINE Alu 1 296 -16 21 71 0 0 chr2 64723476 64723518 -185964336 + AT_rich Low_complexity Low_complexity 1 42 0 287 165 220 11 chr2 64724141 64724232 -185963622 + MER53 DNA DNA 68 177 -12 236 132 19 0 chr2 64724189 64724242 -185963612 - MER53 DNA DNA -124 65 12 * 21 0 0 0 chr2 64724304 64724325 -185963529 + AT_rich Low_complexity Low_complexity 1 21 0 191 234 31 47 chr2 64725137 64725201 -185962653 - MER5B DNA MER1_type -98 80 18 255 232 18 89 chr2 64725427 64725539 -185962315 + MIR SINE MIR 118 221 -41 189 234 64 0 chr2 64726346 64726393 -185961461 - L2 LINE L2 -2 3311 3262 23 54 0 0 chr2 64726710 64726747 -185961107 + AT_rich Low_complexity Low_complexity 1 37 0 2266 122 0 3 chr2 64726835 64727146 -185960708 - AluSx SINE Alu -2 310 1 197 370 140 7 chr2 64727702 64727994 -185959860 + L2 LINE L2 2448 2778 -536 6283 37 22 4 chr2 64728379 64729140 -185958714 - L1PA4 LINE L1 0 6155 5381 472 286 54 29 chr2 64729143 64729384 -185958470 - MIR SINE MIR -9 253 7 1060 190 145 32 chr2 64729589 64729899 -185957955 - L1ME1 LINE L1 -5 6161 5817 2281 87 0 3 chr2 64731341 64731647 -185956207 - AluSq SINE Alu 0 305 1 2339 107 3 0 chr2 64731660 64731970 -185955884 - AluY SINE Alu 0 311 1 2500 81 0 7 chr2 64733769 64734076 -185953778 - AluSp SINE Alu -8 305 1 1762 158 11 4 chr2 64734115 64734394 -185953460 - AluJb SINE Alu -26 286 6 944 280 81 22 chr2 64734511 64734910 -185952944 + L1ME4a LINE L1 5471 5918 -203 2066 123 6 19 chr2 64734910 64735226 -185952628 - AluSx SINE Alu 0 312 1 944 280 81 22 chr2 64735226 64735426 -185952428 + L1ME4a LINE L1 5918 6105 -16 392 273 47 0 chr2 64735581 64735709 -185952145 + L2 LINE L2 1944 2077 -1237 1165 212 48 39 chr2 64735960 64736214 -185951640 - L1MC4 LINE L1 -913 7129 6870 2168 142 0 0 chr2 64736214 64736525 -185951329 - AluSx SINE Alu -1 311 1 1165 212 48 39 chr2 64736525 64736605 -185951249 - L1MC4 LINE L1 -1172 6870 6792 692 296 123 82 chr2 64736605 64736663 -185951191 + L2 LINE L2 2281 2335 -979 802 163 0 15 chr2 64736663 64736798 -185951056 + FLAM_A SINE Alu 1 133 0 692 296 123 82 chr2 64736798 64737408 -185950446 + L2 LINE L2 2335 2976 -338 1024 218 40 0 chr2 64737528 64737730 -185950124 - MER58A DNA MER1_type -10 214 5 316 237 175 70 chr2 64737733 64737847 -185950007 + L2 LINE L2 3147 3272 0 1707 178 14 0 chr2 64738121 64738408 -185949446 + AluJb SINE Alu 1 291 -21 639 238 89 83 chr2 64738907 64739209 -185948645 - MER102b DNA MER1_type 0 341 38 2316 98 7 0 chr2 64739442 64739739 -185948115 - AluSp SINE Alu -14 299 1 2435 82 3 19 chr2 64740062 64740379 -185947475 - AluSq SINE Alu -1 312 1 563 239 119 62 chr2 64741267 64741513 -185946341 - L1MC4a LINE L1 -105 6016 5735 1752 154 27 3 chr2 64741513 64741806 -185946048 - AluJo SINE Alu -12 300 1 563 239 119 62 chr2 64741806 64741978 -185945876 - L1MC4a LINE L1 -386 5735 5574 313 342 168 30 chr2 64742040 64742242 -185945612 - MIR SINE MIR 0 262 33 1705 151 4 19 chr2 64742330 64742458 -185945396 - AluJb SINE Alu -51 261 133 1963 155 10 0 chr2 64742458 64742748 -185945106 - AluSx SINE Alu -19 293 1 1705 151 4 19 chr2 64742748 64742884 -185944970 - AluJb SINE Alu -179 133 1 458 248 9 0 chr2 64742944 64743053 -185944801 - MIR SINE MIR -49 213 104 2206 87 0 11 chr2 64743053 64743339 -185944515 + AluSg SINE Alu 16 298 -12 1389 73 0 11 chr2 64743339 64743516 -185944338 + AluSp SINE Alu 134 308 -5 1677 185 17 23 chr2 64743523 64743825 -185944029 + AluJb SINE Alu 1 300 -12 422 291 10 19 chr2 64743825 64743928 -185943926 - MIR SINE MIR -159 103 2 2415 70 3 0 chr2 64744012 64744310 -185943544 - AluY SINE Alu -12 299 1 406 248 96 8 chr2 64744344 64744469 -185943385 - MER5A DNA MER1_type 0 189 54 979 114 149 0 chr2 64744530 64744705 -185943149 - MER50 LTR ERV1 -37 697 497 232 266 83 79 chr2 64744752 64744840 -185943014 + MER112 DNA MER1_type 19 105 -155 2494 88 11 8 chr2 64744840 64745193 -185942661 - THE1A LTR MaLR 0 355 2 232 266 83 79 chr2 64745193 64745333 -185942521 + MER112 DNA MER1_type 105 248 -12 185 319 0 0 chr2 64745339 64745386 -185942468 - MER5A DNA MER1_type -136 53 7 340 289 68 98 chr2 64745482 64745717 -185942137 + L2 LINE L2 2831 3058 -214 468 123 0 0 chr2 64745738 64745811 -185942043 + (TG)n Simple_repeat Simple_repeat 2 74 0 2330 94 10 10 chr2 64745830 64746137 -185941717 - AluSq SINE Alu -6 307 1 526 230 77 20 chr2 64746282 64746478 -185941376 + AluJb SINE Alu 1 207 -105 376 277 23 9 chr2 64746509 64746733 -185941121 + CT-rich Low_complexity Low_complexity 1 227 0 2224 88 3 10 chr2 64746894 64747199 -185940655 - AluY SINE Alu -8 303 1 1655 161 56 7 chr2 64747404 64747690 -185940164 + AluJo SINE Alu 1 300 -12 872 136 0 8 chr2 64748057 64748189 -185939665 - AluJb SINE Alu -181 131 1 777 144 0 43 chr2 64748292 64748431 -185939423 + FLAM_C SINE Alu 3 135 -8 305 224 59 35 chr2 64748680 64748765 -185939089 - L2 LINE L2 -17 3255 3169 687 267 14 1 chr2 64748964 64749143 -185938711 + MIR3 SINE MIR 5 191 -17 2239 98 3 3 chr2 64749409 64749705 -185938149 - AluSx SINE Alu -16 296 1 961 110 0 22 chr2 64749709 64749845 -185938009 - FLAM_C SINE Alu 0 133 1 1525 147 92 29 chr2 64750133 64750406 -185937448 - AluJo SINE Alu -22 290 1 312 208 40 162 chr2 64750901 64751074 -185936780 + L1MC4 LINE L1 7829 7980 -62 1460 141 134 43 chr2 64751120 64751397 -185936457 - AluJo SINE Alu -10 302 1 834 206 70 26 chr2 64751433 64751661 -185936193 - MIR SINE MIR -8 254 17 417 258 155 0 chr2 64751720 64751914 -185935940 + L1M4 LINE L1 5026 5249 -897 624 300 26 9 chr2 64752079 64752309 -185935545 + LTR16B LTR ERVL 219 452 -12 278 197 0 0 chr2 64752320 64752381 -185935473 + L1M4 LINE L1 5254 5314 -850 1381 119 20 29 chr2 64752381 64752625 -185935229 - AluSg SINE Alu -15 295 54 1961 153 0 0 chr2 64752646 64752968 -185934886 - AluSx SINE Alu 0 322 1 2276 105 0 13 chr2 64753642 64753955 -185933899 - AluSg1 SINE Alu 0 309 1 33 43 0 0 chr2 64753985 64754032 -185933822 + AT_rich Low_complexity Low_complexity 1 47 0 1860 139 3 54 chr2 64754350 64754667 -185933187 + AluJo SINE Alu 1 301 -11 715 235 107 24 chr2 64755283 64755664 -185932190 + L1MC5 LINE L1 7154 7495 -547 2281 105 10 0 chr2 64755689 64755994 -185931860 - AluSx SINE Alu -2 310 3 338 309 130 6 chr2 64756004 64756166 -185931688 + L1MC4 LINE L1 7526 7707 -335 1242 180 176 4 chr2 64756210 64756465 -185931389 + AluJo SINE Alu 1 299 -13 1627 157 26 7 chr2 64756477 64756783 -185931071 + L1M4 LINE L1 5318 5629 -549 275 296 0 25 chr2 64756935 64757016 -185930838 + G-rich Low_complexity Low_complexity 3 81 0 2059 94 17 10 chr2 64757256 64757554 -185930300 - AluY SINE Alu -11 300 1 229 255 141 34 chr2 64758689 64758838 -185929016 + L2 LINE L2 3149 3313 0 24 32 0 0 chr2 64758962 64758993 -185928861 + AT_rich Low_complexity Low_complexity 1 31 0 972 136 0 0 chr2 64759014 64759154 -185928700 - FLAM_C SINE Alu -3 140 1 2213 92 3 10 chr2 64759183 64759477 -185928377 + AluSc SINE Alu 1 292 -17 2484 80 0 0 chr2 64759746 64760057 -185927797 + AluY SINE Alu 1 311 0 1988 145 7 0 chr2 64760214 64760511 -185927343 + AluSx SINE Alu 1 299 -13 403 283 63 93 chr2 64760554 64760865 -185926989 + L1 LINE L1 3984 4303 -1843 843 133 21 14 chr2 64760865 64761008 -185926846 + U4 snRNA snRNA 1 144 -1 403 283 63 93 chr2 64761008 64761281 -185926573 + L1 LINE L1 4303 4553 -1593 2394 70 10 0 chr2 64761281 64761582 -185926272 + AluSc SINE Alu 1 304 -5 403 283 63 93 chr2 64761582 64761631 -185926223 + L1 LINE L1 4553 4602 -1544 1729 122 22 44 chr2 64761774 64762093 -185925761 + MER6 DNA MER2_type 294 865 0 22 56 0 0 chr2 64762288 64762324 -185925530 + AT_rich Low_complexity Low_complexity 1 36 0 308 246 41 25 chr2 64762327 64762558 -185925296 + L1 LINE L1 4807 5045 -1101 21 71 0 0 chr2 64762630 64762672 -185925182 + AT_rich Low_complexity Low_complexity 1 42 0 256 292 31 16 chr2 64762730 64762922 -185924932 - L1MCc LINE L1 -4950 1473 1279 23 33 0 0 chr2 64764081 64764111 -185923743 + AT_rich Low_complexity Low_complexity 1 30 0 1093 214 36 26 chr2 64764151 64764390 -185923464 - L1ME1 LINE L1 -99 6067 5823 2506 69 7 0 chr2 64764390 64764693 -185923161 - AluY SINE Alu -6 305 1 1093 214 36 26 chr2 64764693 64764762 -185923092 - L1ME1 LINE L1 -343 5823 5756 21 36 0 0 chr2 64765408 64765436 -185922418 + AT_rich Low_complexity Low_complexity 1 28 0 314 252 73 126 chr2 64765593 64765693 -185922161 + MIR SINE MIR 18 109 -153 1925 148 0 7 chr2 64765693 64765984 -185921870 + AluJb SINE Alu 1 289 -23 314 252 73 126 chr2 64765984 64766034 -185921820 + MIR SINE MIR 109 160 -102 590 274 88 81 chr2 64766646 64767077 -185920777 - L1ME4a LINE L1 0 6121 5688 610 86 0 21 chr2 64767079 64767172 -185920682 - AluJ/FRAM SINE Alu -1 311 221 417 39 0 0 chr2 64767243 64767294 -185920560 + (TG)n Simple_repeat Simple_repeat 2 52 0 1575 118 9 9 chr2 64768346 64768575 -185919279 - AluSg/x SINE Alu -3 309 81 1636 164 0 53 chr2 64768807 64768975 -185918879 - AluJb SINE Alu -22 290 141 2295 109 3 6 chr2 64768975 64769287 -185918567 - AluSx SINE Alu -1 311 1 1636 164 0 53 chr2 64769287 64769399 -185918455 - AluJb SINE Alu -171 141 25 2200 127 3 0 chr2 64769755 64770063 -185917791 - AluSx SINE Alu -3 309 1 705 245 0 64 chr2 64770478 64770682 -185917172 + MER58A DNA MER1_type 33 223 -1 2288 122 0 0 chr2 64772324 64772628 -185915226 + AluSx SINE Alu 1 304 -8 2541 259 81 4 chr2 64773017 64773951 -185913903 + L2 LINE L2 2289 3304 -9 38 22 0 0 chr2 64775095 64775140 -185912714 + AT_rich Low_complexity Low_complexity 1 45 0 224 397 6 6 chr2 64775869 64776025 -185911829 + L2 LINE L2 1804 1959 -1355 274 222 56 14 chr2 64776690 64776762 -185911092 + L2 LINE L2 3221 3295 -18 261 311 100 0 chr2 64777180 64777270 -185910584 - L2 LINE L2 -16 3256 3158 527 188 73 65 chr2 64777274 64777440 -185910414 - L1ME3 LINE L1 -8 6162 5995 839 134 8 15 chr2 64777599 64777733 -185910121 + AluJ SINE Alu 1 133 -169 7627 21 7 0 chr2 64777733 64779407 -185908447 + L1PA3 LINE L1 4488 6167 0 1013 139 53 0 chr2 64779416 64779567 -185908287 + AluJ SINE Alu 136 294 -18 520 201 59 7 chr2 64781396 64781563 -185906291 - MLT1B LTR MaLR -46 344 159 2029 139 17 0 chr2 64781563 64781851 -185906003 - AluJb SINE Alu -19 293 1 5129 178 55 36 chr2 64781874 64784297 -185903557 - L1MA8 LINE L1 0 6291 3914 1491 184 61 24 chr2 64784297 64784591 -185903263 + AluJb SINE Alu 1 305 -7 5129 178 55 36 chr2 64784591 64784641 -185903213 - L1MA8 LINE L1 -2377 3914 3866 198 103 0 0 chr2 64784641 64784670 -185903184 + (T)n Simple_repeat Simple_repeat 1 29 0 5129 178 55 36 chr2 64784670 64784823 -185903031 - L1MA8 LINE L1 -2425 3866 3717 1808 174 3 3 chr2 64784823 64785121 -185902733 - AluJb SINE Alu -14 298 1 5129 178 55 36 chr2 64785121 64785191 -185902663 - L1MA8 LINE L1 -2574 3717 3502 2229 92 0 0 chr2 64785193 64785477 -185902377 - AluSc SINE Alu -9 300 17 252 0 0 0 chr2 64787717 64787745 -185900109 + (TG)n Simple_repeat Simple_repeat 1 28 0 4175 202 146 13 chr2 64788250 64789491 -185898363 + L1MC4 LINE L1 6495 7900 -142 319 324 52 24 chr2 64790956 64791161 -185896693 + MIR3 SINE MIR 11 223 -39 1922 126 0 90 chr2 64792285 64792619 -185895235 + AluSx SINE Alu 1 304 -8 370 323 88 65 chr2 64793157 64793628 -185894226 + L2 LINE L2 2486 2989 -283 2359 92 7 0 chr2 64793628 64793933 -185893921 - AluSx SINE Alu -5 307 1 370 323 88 65 chr2 64793933 64794076 -185893778 + L2 LINE L2 2989 3127 -145 270 304 0 0 chr2 64794328 64794397 -185893457 - Charlie8 DNA MER1_type 0 2417 2349 240 274 137 10 chr2 64795861 64795963 -185891891 - MIR SINE MIR 0 262 148 2193 126 0 0 chr2 64796013 64796323 -185891531 + AluSx SINE Alu 1 310 -2 237 236 83 14 chr2 64796512 64796584 -185891270 - MIR3 SINE MIR -45 163 87 2150 109 0 3 chr2 64796632 64796925 -185890929 + AluSc SINE Alu 3 294 -15 3366 136 67 25 chr2 64797086 64797698 -185890156 - MER52A LTR ERV1 0 1755 1118 1306 85 0 0 chr2 64797698 64797863 -185889991 + AluSc SINE Alu 138 302 -7 3645 151 131 22 chr2 64797863 64798772 -185889082 - MER52A LTR ERV1 -158 1120 252 1753 169 34 3 chr2 64799286 64799611 -185888243 + LTR18A LTR ERVL 23 357 0 1760 152 17 10 chr2 64800054 64800344 -185887510 + AluJb SINE Alu 1 292 -20 1860 162 7 0 chr2 64800840 64801136 -185886718 - AluSx SINE Alu -13 299 2 1605 132 128 22 chr2 64801345 64801618 -185886236 + AluJb SINE Alu 1 302 -10 925 218 11 16 chr2 64801630 64801818 -185886036 + AluJb SINE Alu 122 308 -4 21 0 0 0 chr2 64802290 64802311 -185885543 + AT_rich Low_complexity Low_complexity 1 21 0 274 29 0 0 chr2 64803234 64803268 -185884586 + MADE1 DNA Mariner 47 80 0 21 0 0 0 chr2 64803447 64803468 -185884386 + AT_rich Low_complexity Low_complexity 1 21 0 263 298 141 16 chr2 64803615 64803736 -185884118 + MIR3 SINE MIR 25 160 -48 2352 82 0 7 chr2 64803738 64804042 -185883812 + AluSq SINE Alu 1 302 -11 360 292 62 0 chr2 64804079 64804175 -185883679 - L2 LINE L2 -4 3268 3167 190 278 26 122 chr2 64805177 64805292 -185882562 - L3 LINE CR1 0 1577 1474 21 82 0 0 chr2 64807403 64807452 -185880402 + AT_rich Low_complexity Low_complexity 1 49 0 562 221 0 9 chr2 64809144 64809257 -185878597 - L2 LINE L2 -15 3298 3187 1961 112 27 17 chr2 64811253 64811548 -185876306 + AluSq SINE Alu 1 298 -15 776 225 43 43 chr2 64811968 64812226 -185875628 + MER46C DNA MER2_type 80 337 -1 27 0 0 26 chr2 64812327 64812346 -185875508 + AT_rich Low_complexity Low_complexity 1 19 -18 2280 119 0 0 chr2 64812346 64812658 -185875196 + AluSx SINE Alu 1 312 0 27 0 0 26 chr2 64812658 64812676 -185875178 + AT_rich Low_complexity Low_complexity 19 37 0 288 0 0 0 chr2 64813897 64813929 -185873925 + (TG)n Simple_repeat Simple_repeat 1 32 0 283 167 0 0 chr2 64813955 64814003 -185873851 + MER5B DNA MER1_type 131 178 0 1325 123 5 14 chr2 64814064 64814275 -185873579 + AluJb SINE Alu 87 295 -17 214 254 16 16 chr2 64816951 64817014 -185870840 + (TA)n Simple_repeat Simple_repeat 1 63 0 2566 61 0 0 chr2 64817683 64817994 -185869860 + AluY SINE Alu 1 311 0 922 146 7 13 chr2 64818507 64818658 -185869196 - AluSx SINE Alu -158 154 5 720 189 0 8 chr2 64819920 64820052 -185867802 - AluJb SINE Alu -45 267 137 359 194 28 0 chr2 64820277 64820349 -185867505 - MIR3 SINE MIR -5 203 130 2101 132 0 3 chr2 64820550 64820854 -185867000 - AluSx SINE Alu -9 303 1 3258 151 17 10 chr2 64821379 64821902 -185865952 - MER1A DNA MER1_type 0 527 1 411 259 73 18 chr2 64821946 64822166 -185865688 - L1ME4a LINE L1 -237 5884 5653 2323 106 0 3 chr2 64822189 64822500 -185865354 + AluSg SINE Alu 1 310 0 851 213 160 4 chr2 64822719 64822944 -185864910 - MIR SINE MIR -1 261 2 331 247 32 11 chr2 64822950 64823043 -185864811 - MIR SINE MIR -147 115 21 2481 169 77 10 chr2 64823340 64824026 -185863828 - L1MB8 LINE L1 -36 6142 5225 536 245 145 79 chr2 64825381 64825457 -185862397 - MIR SINE MIR 0 262 192 207 0 0 0 chr2 64825457 64825480 -185862374 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1727 197 4 0 chr2 64825483 64825762 -185862092 - AluJo SINE Alu -30 282 3 536 245 145 79 chr2 64825762 64825922 -185861932 - MIR SINE MIR -71 191 6 21 0 0 0 chr2 64826222 64826243 -185861611 + AT_rich Low_complexity Low_complexity 1 21 0 2486 80 3 3 chr2 64826829 64827140 -185860714 + AluY SINE Alu 1 311 0 1091 202 18 9 chr2 64827423 64827651 -185860203 + HERVL18 LTR ERVL 5052 5281 -766 369 174 0 0 chr2 64827885 64827954 -185859900 + (CATATA)n Simple_repeat Simple_repeat 6 74 0 1982 153 80 44 chr2 64829639 64829677 -185858177 - Charlie1b DNA MER1_type -2238 523 488 2195 105 3 7 chr2 64829677 64829973 -185857881 - AluSx SINE Alu -17 295 1 1982 153 80 44 chr2 64829973 64830073 -185857781 - Charlie1b DNA MER1_type -2273 488 393 2233 104 3 0 chr2 64830073 64830362 -185857492 - AluSx SINE Alu -22 290 1 1982 153 80 44 chr2 64830362 64830720 -185857134 - Charlie1b DNA MER1_type -2368 393 8 31 0 0 0 chr2 64830854 64830885 -185856969 + AT_rich Low_complexity Low_complexity 1 31 0 2100 133 0 0 chr2 64831020 64831343 -185856511 - AluSx SINE Alu 0 323 1 805 113 9 0 chr2 64831615 64831730 -185856124 - AluJ SINE Alu -17 295 180 1080 169 17 11 chr2 64831795 64831973 -185855881 - AluJ SINE Alu -133 179 1 26 50 0 0 chr2 64832087 64832127 -185855727 + AT_rich Low_complexity Low_complexity 1 40 0 2214 85 17 10 chr2 64832177 64832471 -185855383 + AluSq SINE Alu 1 296 -17 487 270 108 22 chr2 64833076 64833468 -185854386 + L1ME LINE L1 5351 5777 -384 25 31 0 0 chr2 64833800 64833832 -185854022 + AT_rich Low_complexity Low_complexity 1 32 0 1920 174 3 7 chr2 64834278 64834582 -185853272 - AluSx SINE Alu -9 303 1 216 0 0 0 chr2 64834719 64834743 -185853111 + (A)n Simple_repeat Simple_repeat 1 24 0 312 329 82 12 chr2 64835571 64835741 -185852113 + MIR SINE MIR 21 202 -60 203 275 22 0 chr2 64836160 64836251 -185851603 + GA-rich Low_complexity Low_complexity 3 95 0 1536 145 71 35 chr2 64836437 64836720 -185851134 + AluSx SINE Alu 7 299 -13 1098 115 0 0 chr2 64836720 64836893 -185850961 + AluSg/x SINE Alu 134 306 0 2095 123 0 19 chr2 64837414 64837722 -185850132 - AluSx SINE Alu -10 302 1 1353 263 135 72 chr2 64837739 64838414 -185849440 + HAL1 LINE L1 57 819 -1688 2034 97 48 21 chr2 64838414 64838703 -185849151 - AluSq SINE Alu -14 299 3 1353 263 135 72 chr2 64838703 64839043 -185848811 + HAL1 LINE L1 819 1136 -1371 281 292 83 0 chr2 64839052 64839172 -185848682 + L1ME LINE L1 90 219 -5900 232 265 44 29 chr2 64839403 64839471 -185848383 + L1ME LINE L1 561 629 -5490 1676 172 14 4 chr2 64839520 64839823 -185848031 - AluJo SINE Alu 0 306 1 936 130 8 0 chr2 64839828 64839959 -185847895 - FLAM_C SINE Alu -11 132 1 1179 176 5 0 chr2 64840240 64840428 -185847426 - AluJb SINE Alu -15 297 109 335 318 68 0 chr2 64840538 64840670 -185847184 + L1 LINE L1 4085 4225 -1921 1966 155 3 16 chr2 64840793 64841096 -185846758 - AluSx SINE Alu -13 299 1 2016 138 0 10 chr2 64841955 64842260 -185845594 + AluSc SINE Alu 1 302 -7 1743 74 0 0 chr2 64842578 64842794 -185845060 - AluY SINE Alu -20 291 76 25 31 0 0 chr2 64842913 64842945 -185844909 + AT_rich Low_complexity Low_complexity 1 32 0 2425 97 0 0 chr2 64843133 64843442 -185844412 - AluSg SINE Alu -1 309 1 25 51 0 0 chr2 64843838 64843877 -185843977 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr2 64844422 64844450 -185843404 + AT_rich Low_complexity Low_complexity 1 28 0 2472 56 0 7 chr2 64844645 64844948 -185842906 + AluY SINE Alu 2 302 -9 2146 116 0 3 chr2 64845801 64846093 -185841761 + AluSx SINE Alu 1 291 -21 566 273 201 5 chr2 64846093 64846287 -185841567 + MIR SINE MIR 24 255 -7 2500 70 0 0 chr2 64848323 64848624 -185839230 + AluY SINE Alu 1 301 -10 2254 105 10 3 chr2 64849404 64849700 -185838154 + AluSx SINE Alu 1 298 -14 606 149 0 0 chr2 64849746 64849833 -185838021 + 5S rRNA rRNA 1 87 -34 1646 171 24 20 chr2 64850333 64850625 -185837229 + AluJb SINE Alu 1 293 -19 610 297 207 29 chr2 64850646 64850745 -185837109 - L3 LINE CR1 -2 1575 1495 1922 164 45 27 chr2 64850745 64851080 -185836774 - MER2 DNA MER2_type -3 341 1 610 297 207 29 chr2 64851080 64851361 -185836493 - L3 LINE CR1 -82 1495 1127 1433 196 49 16 chr2 64851361 64851667 -185836187 - MLT1D LTR MaLR 0 505 190 886 71 103 0 chr2 64851745 64851871 -185835983 - MER85 DNA T2_type 0 139 1 2042 119 39 0 chr2 64852284 64852569 -185835285 - AluSx SINE Alu -16 296 1 662 230 161 0 chr2 64853073 64853234 -185834620 + MER5A DNA MER1_type 2 188 -1 830 179 32 39 chr2 64853440 64853596 -185834258 - AluSc SINE Alu -14 295 141 2285 107 0 0 chr2 64854174 64854474 -185833380 + AluSx SINE Alu 1 300 -12 1891 167 14 3 chr2 64854543 64854836 -185833018 - AluJb SINE Alu -16 296 1 2349 92 0 16 chr2 64855338 64855652 -185832202 + AluY SINE Alu 1 309 -2 2242 76 0 21 chr2 64855967 64856284 -185831570 + AluSp SINE Alu 1 311 0 196 171 0 0 chr2 64857379 64857414 -185830440 - L2 LINE L2 0 3313 3279 28 29 0 0 chr2 64858210 64858245 -185829609 + AT_rich Low_complexity Low_complexity 1 35 0 1097 148 6 27 chr2 64858292 64858475 -185829379 + AluJb SINE Alu 124 302 -10 2492 90 0 0 chr2 64858481 64858792 -185829062 + AluSq SINE Alu 1 311 -2 2240 82 28 0 chr2 64858798 64859089 -185828765 + AluY SINE Alu 1 299 -12 1580 157 25 62 chr2 64859100 64859236 -185828618 + AluJo SINE Alu 1 140 -172 1568 131 123 15 chr2 64859236 64859504 -185828350 + AluSg1 SINE Alu 1 297 -12 1580 157 25 62 chr2 64859504 64859691 -185828163 + AluJo SINE Alu 140 312 0 247 242 8 55 chr2 64860894 64861022 -185826832 + (CATATA)n Simple_repeat Simple_repeat 2 123 0 22 0 0 0 chr2 64861130 64861152 -185826702 + AT_rich Low_complexity Low_complexity 1 22 0 2206 99 0 32 chr2 64861305 64861619 -185826235 - AluSg SINE Alu -6 304 1 320 221 375 0 chr2 64861675 64861779 -185826075 - MIR SINE MIR -92 170 28 734 166 53 53 chr2 64861793 64861962 -185825892 + MIR SINE MIR 37 205 -57 22 35 0 0 chr2 64862628 64862657 -185825197 + AT_rich Low_complexity Low_complexity 1 29 0 183 80 0 0 chr2 64862731 64862756 -185825098 + (A)n Simple_repeat Simple_repeat 1 25 0 3336 94 52 114 chr2 64863326 64863539 -185824315 + MER39B LTR ERV1 4 229 -424 2352 91 9 31 chr2 64863539 64863859 -185823995 + AluSq SINE Alu 1 313 0 3336 94 52 114 chr2 64863859 64863954 -185823900 + MER39B LTR ERV1 229 328 -325 1689 191 0 28 chr2 64863954 64864274 -185823580 + AluJo SINE Alu 1 311 -1 3336 94 52 114 chr2 64864274 64864632 -185823222 + MER39B LTR ERV1 328 630 -23 258 120 0 4 chr2 64864735 64864970 -185822884 + AluSq SINE Alu 1 321 0 2066 112 0 30 chr2 64865084 64865420 -185822434 + AluSq SINE Alu 1 313 0 1625 112 5 5 chr2 64866210 64866434 -185821420 + AluSx SINE Alu 1 224 -88 1951 118 0 0 chr2 64866434 64866705 -185821149 + AluY SINE Alu 25 295 -16 23 0 0 0 chr2 64867048 64867071 -185820783 + AT_rich Low_complexity Low_complexity 1 23 0 435 267 201 39 chr2 64870223 64870969 -185816885 - L1M4 LINE L1 -775 5371 4419 1947 89 4 11 chr2 64870969 64871240 -185816614 + AluY SINE Alu 35 303 -8 435 267 201 39 chr2 64871240 64871498 -185816356 - L1M4 LINE L1 -1727 4419 4204 294 288 28 41 chr2 64871503 64871635 -185816219 - L1M4 LINE L1 -2055 4091 3969 2155 144 0 0 chr2 64871635 64871947 -185815907 - AluSx SINE Alu 0 312 1 294 288 28 41 chr2 64871947 64872055 -185815799 - L1M4 LINE L1 -2177 3969 3861 7915 160 23 25 chr2 64872055 64873475 -185814379 + L1P LINE L1 22 1439 -4707 1758 179 7 3 chr2 64873590 64873875 -185813979 + AluJo SINE Alu 12 297 -15 1955 155 3 0 chr2 64874000 64874296 -185813558 - AluJb SINE Alu -15 297 1 246 32 0 0 chr2 64874390 64874421 -185813433 + (CA)n Simple_repeat Simple_repeat 2 32 0 286 258 43 11 chr2 64874435 64874528 -185813326 - L1MEd LINE L1 -4864 1552 1457 243 0 0 0 chr2 64874779 64874806 -185813048 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1723 159 4 4 chr2 64874814 64875084 -185812770 - AluJb SINE Alu -38 274 5 516 273 77 58 chr2 64875096 64875519 -185812335 - L1MEc LINE L1 -4898 1678 1276 2417 85 0 0 chr2 64875519 64875825 -185812029 + AluY SINE Alu 1 306 -5 516 273 77 58 chr2 64875825 64876021 -185811833 - L1MEc LINE L1 -5300 1276 1085 1745 113 8 8 chr2 64876050 64876307 -185811547 - AluSg SINE Alu 0 310 54 1903 154 4 0 chr2 64876328 64876649 -185811205 - AluSx SINE Alu 0 322 1 2274 105 0 13 chr2 64877321 64877634 -185810220 - AluSg1 SINE Alu 0 309 1 33 43 0 0 chr2 64877664 64877711 -185810143 + AT_rich Low_complexity Low_complexity 1 47 0 1693 147 10 54 chr2 64878029 64878343 -185809511 + AluJo SINE Alu 1 300 -12 845 235 107 24 chr2 64878959 64879340 -185808514 + L1MC5 LINE L1 7154 7495 -547 2285 105 10 0 chr2 64879365 64879670 -185808184 - AluSx SINE Alu -2 310 3 253 303 130 6 chr2 64879680 64879842 -185808012 + L1MC4 LINE L1 7526 7707 -335 1229 180 176 4 chr2 64879886 64880142 -185807712 + AluJo SINE Alu 1 300 -12 1778 185 47 7 chr2 64880149 64880595 -185807259 + L1MB7 LINE L1 5313 5801 -373 227 146 98 0 chr2 64880604 64880645 -185807209 - MER2 DNA MER2_type -24 321 277 902 184 0 43 chr2 64880645 64880830 -185807024 + FRAM SINE Alu 1 170 -6 1633 136 32 0 chr2 64880831 64881082 -185806772 - MER2 DNA MER2_type -86 259 1 685 115 0 0 chr2 64881082 64881178 -185806676 + L1MB7 LINE L1 5828 5923 -255 2443 200 35 24 chr2 64881184 64881695 -185806159 - MER82 DNA MER2_type -6 647 131 1029 167 28 37 chr2 64881778 64881994 -185805860 + L1MB7 LINE L1 5922 6135 -49 1995 143 0 7 chr2 64881995 64882281 -185805573 + AluJb SINE Alu 3 286 -26 576 291 73 6 chr2 64883469 64883691 -185804163 - MIR SINE MIR -14 248 16 290 295 116 0 chr2 64884128 64884223 -185803631 + L2 LINE L2 3198 3303 -10 186 371 158 0 chr2 64884227 64884429 -185803425 - L2 LINE L2 -673 2641 2408 * 1033 244 168 33 chr2 64884419 64884963 -185802891 - L2 LINE L2 -1 3312 2702 2157 125 3 13 chr2 64884969 64885282 -185802572 - AluSx SINE Alu -2 310 1 28667 91 14 11 chr2 64885325 64886687 -185801167 + L1PA6 LINE L1 11 1367 -4787 2425 74 3 0 chr2 64886687 64886985 -185800869 + AluSp SINE Alu 1 299 -14 28667 91 14 11 chr2 64886985 64891718 -185796136 + L1PA6 LINE L1 1367 6138 -16 537 164 14 7 chr2 64891727 64891873 -185795981 + (TA)n Simple_repeat Simple_repeat 1 147 0 329 309 36 72 chr2 64891884 64892023 -185795831 - L2 LINE L2 -638 2676 2543 1372 193 7 61 chr2 64892030 64892325 -185795529 + AluJb SINE Alu 16 294 -18 3400 206 83 25 chr2 64892992 64893903 -185793951 + Cheshire DNA MER1_type 1 964 -1456 1269 200 42 8 chr2 64893934 64894199 -185793655 + MSTD LTR MaLR 123 396 0 992 106 0 0 chr2 64894199 64894331 -185793523 + AluY SINE Alu 1 132 -179 2573 181 47 11 chr2 64894358 64894928 -185792926 + Cheshire DNA MER1_type 983 1573 -847 1702 188 10 14 chr2 64894942 64895234 -185792620 - AluJo SINE Alu -21 291 1 1466 178 73 11 chr2 64895248 64895535 -185792319 - AluJb SINE Alu -7 305 1 1057 98 0 0 chr2 64895537 64895669 -185792185 - AluSp SINE Alu -181 132 1 3418 170 69 31 chr2 64895673 64896481 -185791373 + Cheshire DNA MER1_type 1582 2420 0 759 272 70 29 chr2 64897506 64897749 -185790105 - MIR SINE MIR 0 262 10 869 204 17 17 chr2 64897927 64898099 -185789755 + FAM SINE Alu 1 172 -3 2222 118 0 0 chr2 64898132 64898437 -185789417 - AluSg SINE Alu -5 305 1 2260 88 3 7 chr2 64900475 64900770 -185787084 + AluSp SINE Alu 1 294 -19 2134 102 0 0 chr2 64901092 64901367 -185786487 + AluSx SINE Alu 16 290 -22 889 195 21 11 chr2 64901693 64901883 -185785971 - AluY SINE Alu -119 192 1 399 300 85 20 chr2 64902048 64902380 -185785474 - L1ME LINE L1 -500 5731 5374 180 176 0 0 chr2 64902411 64902445 -185785409 + (TG)n Simple_repeat Simple_repeat 2 35 0 301 265 72 0 chr2 64902445 64902528 -185785326 + L1MC4 LINE L1 6614 6702 -1340 1889 141 3 10 chr2 64902528 64902827 -185785027 - AluJb SINE Alu -15 297 1 325 252 122 48 chr2 64902888 64902961 -185784893 - L1ME LINE L1 -1004 5211 5145 2232 91 0 11 chr2 64902961 64903271 -185784583 - AluSq SINE Alu 0 307 1 325 252 122 48 chr2 64903271 64903343 -185784511 - L1ME LINE L1 -1070 5145 5054 1062 219 44 16 chr2 64903456 64903926 -185783928 - L1MEc LINE L1 -3653 2562 2126 561 293 179 11 chr2 64903930 64904210 -185783644 - LTR16B LTR ERVL -4 460 134 369 265 63 29 chr2 64904385 64904623 -185783231 - L1MEc LINE L1 -4267 2129 1884 927 133 12 17 chr2 64904736 64904909 -185782945 + AluSx SINE Alu 54 225 -87 196 344 32 21 chr2 64905228 64905321 -185782533 - MER5A DNA MER1_type -82 107 14 273 250 40 0 chr2 64905241 64905317 -185782537 + MER5B DNA MER1_type 97 175 -3 2182 88 7 0 chr2 64905813 64906096 -185781758 + AluSx SINE Alu 16 300 -12 2179 71 21 4 chr2 64906134 64906414 -185781440 + AluSg SINE Alu 9 293 -17 2097 102 7 3 chr2 64906462 64906788 -185781066 + AluSg1 SINE Alu 1 327 0 1540 162 38 30 chr2 64906790 64907081 -185780773 + AluJo SINE Alu 14 306 0 300 256 128 24 chr2 64907703 64907828 -185780026 - L1ME LINE L1 -302 5862 5725 256 296 29 0 chr2 64907877 64907992 -185779862 - L1ME LINE L1 -554 5616 5499 566 257 143 47 chr2 64908002 64908302 -185779552 - MLT1I LTR MaLR 0 409 81 312 273 47 8 chr2 64908385 64908513 -185779341 - L1P4 LINE L1 -711 5455 5323 985 141 17 28 chr2 64908514 64908691 -185779163 - MSTD LTR MaLR 0 396 222 594 215 38 4 chr2 64908717 64909043 -185778811 + CT-rich Low_complexity Low_complexity 1 337 0 2338 74 10 0 chr2 64909436 64909732 -185778122 - AluY SINE Alu -12 299 1 399 300 85 20 chr2 64909897 64910229 -185777625 - L1ME LINE L1 -500 5662 5305 468 235 0 0 chr2 64910260 64910375 -185777479 + (TATATG)n Simple_repeat Simple_repeat 1 115 0 1870 141 3 10 chr2 64910379 64910676 -185777178 - AluJb SINE Alu -17 295 1 361 231 49 31 chr2 64910737 64910810 -185777044 - L1 LINE L1 -1004 5142 5072 2117 99 0 14 chr2 64910810 64911117 -185776737 - AluSq SINE Alu 0 307 5 361 231 49 31 chr2 64911117 64911235 -185776619 - L1 LINE L1 -1074 5072 4943 275 68 0 23 chr2 64911320 64911364 -185776490 - LTR65 LTR ERV1 -283 386 344 1975 104 0 8 chr2 64911817 64912077 -185775777 - AluSx SINE Alu -22 290 33 2314 104 3 3 chr2 64912244 64912553 -185775301 - AluY SINE Alu -2 309 1 1750 162 13 48 chr2 64912597 64912911 -185774943 + AluJb SINE Alu 1 303 -9 24 67 0 0 chr2 64913006 64913051 -185774803 + AT_rich Low_complexity Low_complexity 1 45 0 2410 49 0 30 chr2 64913784 64914088 -185773766 + AluY SINE Alu 1 295 -16 729 250 70 5 chr2 64914814 64914858 -185772996 + MIR SINE MIR 34 74 -188 1621 154 39 56 chr2 64914858 64915164 -185772690 - AluJb SINE Alu -11 301 1 729 250 70 5 chr2 64915164 64915319 -185772535 + MIR SINE MIR 74 246 -16 2154 88 0 0 chr2 64915491 64915765 -185772089 + AluY SINE Alu 37 310 -1 403 272 103 61 chr2 64916427 64916526 -185771328 + MLT1J LTR MaLR 5 98 -413 2420 82 3 0 chr2 64916526 64916829 -185771025 - AluSp SINE Alu -9 304 1 403 272 103 61 chr2 64916829 64916942 -185770912 + MLT1J LTR MaLR 98 226 -285 3954 121 44 6 chr2 64916942 64917644 -185770210 + L1MA8 LINE L1 5374 6102 -189 819 133 30 0 chr2 64917646 64917781 -185770073 + FRAM SINE Alu 18 156 -20 770 108 166 0 chr2 64917787 64917944 -185769910 + L1MA8 LINE L1 6106 6288 -3 259 176 52 38 chr2 64918069 64918172 -185769682 + MLT1J LTR MaLR 368 429 -21 235 271 103 47 chr2 64918378 64918485 -185769369 + MIR3 SINE MIR 92 204 -4 1286 152 5 46 chr2 64918644 64918861 -185768993 - AluJb SINE Alu -20 292 85 232 315 130 39 chr2 64919175 64919313 -185768541 - MLT1J LTR MaLR -30 481 357 1800 141 38 3 chr2 64919313 64919604 -185768250 - AluSx SINE Alu -11 301 1 232 315 130 39 chr2 64919604 64919719 -185768135 - MLT1J LTR MaLR -154 357 205 2354 85 0 3 chr2 64919732 64920027 -185767827 + AluSq SINE Alu 1 294 -19 744 42 93 34 chr2 64920043 64920161 -185767693 + AluSq/x SINE Alu 1 125 -188 222 333 105 9 chr2 64920283 64920388 -185767466 - MIR SINE MIR -147 115 1 245 159 68 0 chr2 64920566 64920610 -185767244 + L2 LINE L2 3221 3267 -5 429 258 67 8 chr2 64920854 64920974 -185766880 + MIR SINE MIR 20 146 -116 333 59 69 20 chr2 64921580 64921681 -185766173 + (TA)n Simple_repeat Simple_repeat 1 106 0 687 178 16 8 chr2 64921681 64921810 -185766044 - AluJ SINE Alu -7 305 176 684 179 0 0 chr2 64921821 64921933 -185765921 - AluJ SINE Alu -200 112 1 2345 88 0 3 chr2 64922181 64922478 -185765376 + AluSg SINE Alu 2 297 -13 1994 148 0 3 chr2 64922847 64923150 -185764704 - AluJo SINE Alu -10 302 1 25 37 0 37 chr2 64923179 64923201 -185764653 + AT_rich Low_complexity Low_complexity 1 22 -30 1645 190 3 20 chr2 64923201 64923496 -185764358 + AluJo SINE Alu 1 290 -22 25 37 0 37 chr2 64923496 64923527 -185764327 + AT_rich Low_complexity Low_complexity 22 52 0 718 153 0 87 chr2 64923747 64923897 -185763957 - FLAM_A SINE Alu 0 142 6 30 27 0 0 chr2 64924660 64924697 -185763157 + AT_rich Low_complexity Low_complexity 1 37 0 444 246 17 0 chr2 64924920 64925038 -185762816 - L1ME2 LINE L1 -27 6137 6018 348 158 0 99 chr2 64925092 64925141 -185762713 - L1MB7 LINE L1 -7 6177 6141 692 124 54 16 chr2 64925141 64925270 -185762584 + L1MB3 LINE L1 6048 6181 -2 348 158 0 99 chr2 64925270 64925321 -185762533 - L1MB7 LINE L1 -43 6141 6087 1754 168 18 0 chr2 64925329 64925615 -185762239 - AluSx SINE Alu -21 291 1 875 137 0 0 chr2 64925876 64926007 -185761847 - FLAM_C SINE Alu 0 133 3 1759 161 7 10 chr2 64926172 64926470 -185761384 - AluJb SINE Alu -15 297 1 36 0 0 0 chr2 64926611 64926647 -185761207 + AT_rich Low_complexity Low_complexity 1 36 0 2084 95 0 7 chr2 64926895 64927206 -185760648 - AluY SINE Alu 0 309 1 2155 75 4 7 chr2 64927682 64927960 -185759894 + AluSx SINE Alu 16 292 -20 3895 168 159 32 chr2 64927965 64929031 -185758823 - Charlie1a DNA MER1_type -248 1207 1 2278 78 6 35 chr2 64929733 64930052 -185757802 - AluY SINE Alu -1 310 1 715 84 0 0 chr2 64930189 64930284 -185757570 + AluSp/q SINE Alu 200 294 -19 2114 90 41 7 chr2 64930300 64930590 -185757264 + AluSx SINE Alu 1 300 -12 437 167 24 0 chr2 64930636 64930720 -185757134 - AluJ/FRAM SINE Alu -9 303 218 591 126 118 79 chr2 64930751 64930878 -185756976 - FLAM_C SINE Alu -1 132 1 324 0 0 0 chr2 64931188 64931224 -185756630 + (CA)n Simple_repeat Simple_repeat 2 37 0 324 319 80 84 chr2 64931598 64932232 -185755622 + L1M2 LINE L1 773 1404 -5445 2307 53 0 14 chr2 64933321 64933625 -185754229 + AluSc SINE Alu 1 300 0 387 293 167 20 chr2 64934300 64934498 -185753356 - MIR SINE MIR 0 262 36 770 246 144 0 chr2 64934624 64934839 -185753015 - MIR SINE MIR -15 247 2 222 277 148 10 chr2 64935011 64935112 -185752742 - MIR SINE MIR 0 262 148 233 241 45 27 chr2 64935566 64935678 -185752176 + L1ME4a LINE L1 5967 6080 -41 403 133 120 0 chr2 64935841 64935916 -185751938 - AluJ/FRAM SINE Alu -13 299 216 * 709 193 20 27 chr2 64935911 64936061 -185751793 - FAM SINE Alu -36 149 1 281 123 0 18 chr2 64936072 64936129 -185751725 + (TG)n Simple_repeat Simple_repeat 1 56 0 643 175 0 56 chr2 64936129 64936255 -185751599 - FLAM_C SINE Alu -23 120 2 900 111 0 44 chr2 64936290 64936425 -185751429 - AluSg/x SINE Alu -13 297 169 1496 169 0 78 chr2 64936558 64936695 -185751159 + AluJo SINE Alu 17 163 -149 2160 105 3 10 chr2 64936695 64936991 -185750863 + AluSx SINE Alu 6 299 -13 1496 169 0 78 chr2 64936991 64937173 -185750681 + AluJo SINE Alu 163 311 -1 21 71 0 0 chr2 64937222 64937264 -185750590 + AT_rich Low_complexity Low_complexity 1 42 0 1311 158 9 9 chr2 64937576 64937797 -185750057 + AluSp SINE Alu 93 313 0 784 177 0 0 chr2 64938100 64938224 -185749630 + AluJo/FLAM SINE Alu 2 125 -177 2076 117 0 3 chr2 64938232 64938551 -185749303 + AluSg SINE Alu 1 318 0 2212 110 10 0 chr2 64938694 64938993 -185748861 + AluSp SINE Alu 1 302 -11 2214 216 69 47 chr2 64939517 64940019 -185747835 - L1ME1 LINE L1 -5 6161 5638 2289 98 0 3 chr2 64940019 64940325 -185747529 - AluSq SINE Alu -8 305 1 2214 216 69 47 chr2 64940325 64940521 -185747333 - L1ME1 LINE L1 -528 5638 5448 189 309 15 29 chr2 64941641 64941709 -185746145 + L2 LINE L2 3000 3066 -206 685 242 0 0 chr2 64941960 64942092 -185745762 - FLAM_A SINE Alu 0 133 2 2204 113 0 0 chr2 64942252 64942545 -185745309 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr2 64942734 64942758 -185745096 + AT_rich Low_complexity Low_complexity 1 24 0 922 205 29 13 chr2 64942775 64943014 -185744840 - L1MB7 LINE L1 -46 6138 5896 189 0 0 0 chr2 64943438 64943459 -185744395 + (TA)n Simple_repeat Simple_repeat 1 21 0 2054 146 0 0 chr2 64943475 64943784 -185744070 - AluJb SINE Alu -3 309 1 552 255 139 4 chr2 64943784 64944056 -185743798 - L1MC4a LINE L1 -176 5945 5639 419 346 118 35 chr2 64944134 64944565 -185743289 - L2 LINE L2 -2 3270 2804 2255 307 141 24 chr2 64944610 64945484 -185742370 - L2 LINE L2 -609 2705 1935 2022 119 20 0 chr2 64945484 64945778 -185742076 - AluSx SINE Alu -12 300 1 2255 307 141 24 chr2 64945778 64946416 -185741438 - L2 LINE L2 -1379 1935 1016 2306 66 17 0 chr2 64946826 64947114 -185740740 + AluY SINE Alu 1 293 -18 2108 102 21 3 chr2 64947129 64947413 -185740441 + AluSx SINE Alu 1 289 -23 2187 100 30 13 chr2 64947466 64947767 -185740087 + AluSc SINE Alu 1 306 -3 462 224 61 79 chr2 64947779 64947910 -185739944 + L1ME3A LINE L1 5338 5465 -697 2020 126 3 23 chr2 64947910 64948212 -185739642 - AluSx SINE Alu -16 296 1 462 224 61 79 chr2 64948212 64948308 -185739546 + L1ME3A LINE L1 5465 5561 -601 640 264 77 67 chr2 64948318 64948502 -185739352 + L1ME3A LINE L1 5670 5851 -319 1924 159 0 10 chr2 64948502 64948811 -185739043 - AluJb SINE Alu -4 308 3 640 264 77 67 chr2 64948811 64949122 -185738732 + L1ME3A LINE L1 5851 6170 0 2329 70 37 0 chr2 64949575 64949874 -185737980 + AluY SINE Alu 1 310 -1 890 97 0 0 chr2 64950161 64950274 -185737580 + AluSq/x SINE Alu 1 113 -200 1949 136 7 3 chr2 64950473 64950768 -185737086 + AluSx SINE Alu 1 296 -16 800 172 89 5 chr2 64950770 64950973 -185736881 + Charlie1 DNA MER1_type 2538 2757 -4 1532 58 29 29 chr2 64951424 64951632 -185736222 + AluSc SINE Alu 87 294 -15 2208 97 7 0 chr2 64951632 64951930 -185735924 + AluSq SINE Alu 1 301 -12 2315 94 0 0 chr2 64952158 64952465 -185735389 + AluSc SINE Alu 3 309 0 22 70 0 0 chr2 64953309 64953352 -185734502 + AT_rich Low_complexity Low_complexity 1 43 0 2093 136 0 0 chr2 64953370 64953664 -185734190 - AluJb SINE Alu -18 294 1 812 81 0 0 chr2 64953778 64953877 -185733977 - FLAM_C SINE Alu -34 109 11 2229 95 3 0 chr2 64954255 64954549 -185733305 + AluSg SINE Alu 1 295 -15 1220 154 0 73 chr2 64955106 64955303 -185732551 - AluJo SINE Alu -6 306 127 2484 68 0 0 chr2 64955303 64955598 -185732256 + AluY SINE Alu 1 295 -16 1220 154 0 73 chr2 64955598 64955634 -185732220 - AluJo SINE Alu -185 127 90 1744 143 25 0 chr2 64955690 64955969 -185731885 - AluJo SINE Alu -26 286 1 21 71 0 0 chr2 64955978 64956020 -185731834 + AT_rich Low_complexity Low_complexity 1 42 0 712 199 7 0 chr2 64956151 64956287 -185731567 + FAM SINE Alu 35 171 -14 1486 269 122 15 chr2 64956309 64956922 -185730932 - L2 LINE L2 -453 2861 2183 1465 218 51 70 chr2 64956994 64957232 -185730622 - L1M4 LINE L1 -1140 5006 4765 2274 105 0 0 chr2 64957232 64957526 -185730328 - AluSq SINE Alu -19 294 1 1465 218 51 70 chr2 64957526 64957855 -185729999 - L1M4 LINE L1 -1381 4765 4450 776 211 17 34 chr2 64957868 64958043 -185729811 - FRAM SINE Alu -4 172 1 237 83 67 33 chr2 64958050 64958110 -185729744 + (TTAAA)n Simple_repeat Simple_repeat 1 62 0 307 322 126 0 chr2 64958181 64958324 -185729530 - L2 LINE L2 -1192 2122 1962 569 257 37 28 chr2 64958332 64958546 -185729308 - L2 LINE L2 -1481 1833 1618 501 246 123 11 chr2 64958749 64958928 -185728926 - MIR SINE MIR -1 261 63 1301 164 58 51 chr2 64958989 64959282 -185728572 + AluJo SINE Alu 1 295 -17 2263 109 0 6 chr2 64959285 64959596 -185728258 + AluSc SINE Alu 1 309 0 201 171 0 0 chr2 64960200 64960235 -185727619 + (TA)n Simple_repeat Simple_repeat 1 35 0 2105 115 0 3 chr2 64960248 64960534 -185727320 - AluSg SINE Alu -25 285 1 2029 134 20 0 chr2 64960944 64961242 -185726612 + AluSx SINE Alu 1 304 -8 1153 136 6 0 chr2 64961242 64961411 -185726443 + AluSp SINE Alu 134 303 -10 550 156 0 0 chr2 64961543 64961620 -185726234 - AluJo/FRAM SINE Alu -47 265 189 1440 160 72 0 chr2 64961620 64961857 -185725997 + AluJo SINE Alu 21 274 -38 359 115 0 0 chr2 64962109 64962170 -185725684 - AluS SINE Alu -239 61 1 2406 91 7 0 chr2 64962311 64962620 -185725234 + AluSx SINE Alu 1 311 -1 1859 161 3 13 chr2 64963083 64963387 -185724467 + AluJb SINE Alu 1 301 -11 270 154 3 7 chr2 64963548 64963610 -185724244 + Alu SINE Alu 253 301 -1 1987 123 65 0 chr2 64963823 64964100 -185723754 + AluSx SINE Alu 2 296 -16 24 32 0 0 chr2 64964181 64964212 -185723642 + AT_rich Low_complexity Low_complexity 1 31 0 205 226 132 0 chr2 64965138 64965191 -185722663 - L2 LINE L2 -8 3264 3205 23 68 0 0 chr2 64965348 64965392 -185722462 + AT_rich Low_complexity Low_complexity 1 44 0 1891 102 112 18 chr2 64965868 64966153 -185721701 - AluSx SINE Alu 0 312 1 367 227 59 8 chr2 64966158 64966277 -185721577 - LTR37B LTR ERV1 -31 437 313 621 161 155 0 chr2 64966284 64966439 -185721415 - L1ME1 LINE L1 -201 5965 5787 690 178 68 129 chr2 64966448 64966468 -185721386 - LTR37B LTR ERV1 -162 306 286 2106 109 0 17 chr2 64966468 64966598 -185721256 + AluSq SINE Alu 7 138 -175 2234 110 3 0 chr2 64966598 64966898 -185720956 + AluSx SINE Alu 1 301 -11 2106 109 0 17 chr2 64966898 64967061 -185720793 + AluSq SINE Alu 138 295 -18 690 178 68 129 chr2 64967061 64967312 -185720542 - LTR37B LTR ERV1 -182 286 56 2546 60 0 0 chr2 64967312 64967613 -185720241 + AluY SINE Alu 1 301 -10 690 178 68 129 chr2 64967613 64967666 -185720188 - LTR37B LTR ERV1 -412 56 1 5062 198 91 51 chr2 64967761 64968690 -185719164 - L1ME1 LINE L1 -4 6162 5272 2168 112 13 0 chr2 64968690 64968993 -185718861 - AluSx SINE Alu -5 307 1 5062 198 91 51 chr2 64968993 64970311 -185717543 - L1ME1 LINE L1 -894 5272 4008 1947 213 73 12 chr2 64970311 64970791 -185717063 - LTR22 LTR ERVK 0 509 1 5062 198 91 51 chr2 64970791 64970870 -185716984 - L1ME1 LINE L1 -2158 4008 3934 1666 172 7 7 chr2 64970870 64971155 -185716699 - AluJo SINE Alu -25 287 3 5062 198 91 51 chr2 64971155 64971534 -185716320 - L1ME1 LINE L1 -2232 3934 3348 1217 141 29 0 chr2 64971547 64971717 -185716137 - AluSc SINE Alu -20 289 115 321 282 36 36 chr2 64971717 64971827 -185716027 + L1 LINE L1 2444 2553 -3593 924 140 0 0 chr2 64971836 64971972 -185715882 + AluSg/x SINE Alu 165 300 -10 507 246 77 23 chr2 64972361 64972581 -185715273 + L1MC4a LINE L1 5792 6023 -1785 43 64 0 0 chr2 64972665 64972743 -185715111 + AT_rich Low_complexity Low_complexity 1 78 0 2105 133 0 17 chr2 64972971 64973272 -185714582 + AluJo SINE Alu 1 296 -16 484 259 151 6 chr2 64973308 64973474 -185714380 + MIR SINE MIR 48 237 -25 2111 114 4 0 chr2 64974427 64974738 -185713116 - AluSq SINE Alu 0 312 1 2181 109 26 7 chr2 64974753 64975057 -185712797 - AluSg SINE Alu 0 310 1 1170 170 188 33 chr2 64975469 64975873 -185711981 + L1ME1 LINE L1 5027 5367 -992 1921 151 0 13 chr2 64975873 64976171 -185711683 + AluJb SINE Alu 1 294 -18 1170 170 188 33 chr2 64976171 64976400 -185711454 + L1ME1 LINE L1 5367 5778 -581 2178 93 3 10 chr2 64976418 64976707 -185711147 + AluSc SINE Alu 1 287 -22 1367 165 30 9 chr2 64976709 64976939 -185710915 + AluJb SINE Alu 65 299 -13 1225 226 51 17 chr2 64976939 64977280 -185710574 + L1ME1 LINE L1 5824 6333 -1 427 257 96 0 chr2 64977942 64978078 -185709776 + MER46C DNA MER2_type 1 149 -189 2144 115 0 20 chr2 64980007 64980312 -185707542 + AluSx SINE Alu 1 299 -13 1948 146 7 20 chr2 64980615 64980916 -185706938 + AluJo SINE Alu 1 297 -15 444 210 8 42 chr2 64981327 64981446 -185706408 + MIR SINE MIR 148 262 0 223 218 69 35 chr2 64982096 64982183 -185705671 + L2 LINE L2 1983 2072 -1242 972 293 127 77 chr2 64982221 64982718 -185705136 + L2 LINE L2 2272 2742 -571 1756 122 0 4 chr2 64982718 64982963 -185704891 + AluSg SINE Alu 1 244 -66 972 293 127 77 chr2 64982963 64983396 -185704458 + L2 LINE L2 2742 3271 -42 1754 191 32 86 chr2 64983882 64984188 -185703666 + L1MB5 LINE L1 1179 1500 -4884 2362 94 0 0 chr2 64984188 64984487 -185703367 + AluY SINE Alu 1 299 -12 1754 191 32 86 chr2 64984487 64984572 -185703282 + L1MB5 LINE L1 1500 1588 -4796 1717 159 0 40 chr2 64984572 64984695 -185703159 + AluJo SINE Alu 3 129 -183 2283 98 0 3 chr2 64984695 64984991 -185702863 - AluSq SINE Alu -18 295 1 1717 159 0 40 chr2 64984991 64985163 -185702691 + AluJo SINE Alu 129 286 -26 1754 191 32 86 chr2 64985163 64985361 -185702493 + L1MB5 LINE L1 1588 1736 -4648 2330 106 0 0 chr2 64985361 64985664 -185702190 + AluSq SINE Alu 3 305 -8 1754 191 32 86 chr2 64985664 64985700 -185702154 + L1MB5 LINE L1 1736 1772 -4612 253 242 144 7 chr2 64986111 64986264 -185701590 + L1MB5 LINE L1 2042 2215 -4348 311 319 56 0 chr2 64986284 64986428 -185701426 - L1M4c LINE L1 -4046 2338 2187 467 287 28 0 chr2 64986455 64986636 -185701218 + L1MB5 LINE L1 3576 3761 -2621 6574 183 51 23 chr2 64986639 64986864 -185700990 + L1MB5 LINE L1 3902 4119 -2291 2252 86 58 0 chr2 64986864 64987156 -185700698 + AluSg SINE Alu 1 309 -1 6574 183 51 23 chr2 64987156 64989167 -185698687 + L1MB5 LINE L1 4119 6218 -192 2075 111 0 17 chr2 64989167 64989465 -185698389 + AluSx SINE Alu 1 293 -19 6574 183 51 23 chr2 64989465 64989664 -185698190 + L1MB5 LINE L1 6218 6410 0 908 112 0 0 chr2 64989668 64989793 -185698061 + FLAM_C SINE Alu 1 125 -18 1708 151 41 39 chr2 64989808 64990172 -185697682 + L1MB8 LINE L1 5813 6177 -1 242 274 83 12 chr2 64990306 64990390 -185697464 - MIR SINE MIR -103 159 70 445 187 66 0 chr2 64990412 64990503 -185697351 + MIR SINE MIR 166 262 0 2027 80 7 11 chr2 64990810 64991084 -185696770 + AluSc SINE Alu 1 273 -36 1676 83 0 18 chr2 64991102 64991331 -185696523 + AluSx SINE Alu 1 225 -87 247 287 46 0 chr2 64991652 64991739 -185696115 - MER5B DNA MER1_type -84 94 4 2173 99 7 0 chr2 64992220 64992523 -185695331 + AluSx SINE Alu 1 305 -7 1673 87 26 0 chr2 64992550 64992781 -185695073 + AluSg SINE Alu 1 237 -73 217 98 0 49 chr2 64993630 64993671 -185694183 + (CCCCG)n Simple_repeat Simple_repeat 5 43 0 230 371 19 9 chr2 64994683 64994788 -185693066 - L2 LINE L2 -521 2793 2688 2400 43 0 16 chr2 64994789 64995093 -185692761 + AluY SINE Alu 1 299 -12 216 328 127 35 chr2 64995308 64995732 -185692122 - L2 LINE L2 -1154 2160 1698 288 129 29 29 chr2 64996437 64996507 -185691347 + CT-rich Low_complexity Low_complexity 1 70 0 1478 182 6 67 chr2 64996507 64996836 -185691018 - AluJb SINE Alu -3 309 1 2450 48 0 0 chr2 64996845 64997137 -185690717 - AluY SINE Alu -19 292 1 685 250 54 114 chr2 64997152 64997380 -185690474 + L1MC4a LINE L1 5606 5846 -1962 1637 146 50 0 chr2 64997380 64997661 -185690193 + AluJo SINE Alu 7 301 -11 685 250 54 114 chr2 64997661 64997868 -185689986 + L1MC4a LINE L1 5846 6002 -1806 2170 109 0 3 chr2 64997868 64998172 -185689682 + AluSg SINE Alu 1 303 -7 685 250 54 114 chr2 64998172 64998295 -185689559 + L1MC4a LINE L1 6002 6131 -1677 1871 156 3 0 chr2 64998329 64998630 -185689224 + AluJb SINE Alu 3 304 -8 802 267 73 29 chr2 64998662 64998935 -185688919 - Charlie2 DNA MER1_type -2451 331 47 325 303 41 8 chr2 64998941 64999063 -185688791 + L2 LINE L2 1794 1919 -1395 2104 117 7 0 chr2 64999195 64999502 -185688352 + AluSx SINE Alu 1 309 -3 4758 113 29 43 chr2 64999672 64999928 -185687926 - MER4E LTR ERV1 0 779 521 1973 127 3 3 chr2 64999928 65000227 -185687627 - AluSx SINE Alu -13 299 1 4758 113 29 43 chr2 65000227 65000758 -185687096 - MER4E LTR ERV1 -258 521 3 21 0 0 0 chr2 65000910 65000931 -185686923 + AT_rich Low_complexity Low_complexity 1 21 0 2265 53 0 3 chr2 65001346 65001628 -185686226 - AluY SINE Alu -30 281 1 27 39 0 19 chr2 65001700 65001723 -185686131 + AT_rich Low_complexity Low_complexity 1 23 -28 2006 93 7 13 chr2 65001723 65002024 -185685830 + AluSx SINE Alu 1 299 -13 27 39 0 19 chr2 65002024 65002052 -185685802 + AT_rich Low_complexity Low_complexity 23 51 0 309 338 0 62 chr2 65002624 65002769 -185685085 + L1MC4a LINE L1 5265 5400 -2408 2140 99 13 0 chr2 65002779 65003083 -185684771 - AluSx SINE Alu -4 308 1 489 180 11 11 chr2 65003112 65003201 -185684653 - AluJb SINE Alu -68 244 156 1333 269 92 16 chr2 65003230 65003794 -185684060 + L1MC4a LINE L1 5455 6061 -1747 2224 84 0 16 chr2 65003914 65004223 -185683631 + AluSc SINE Alu 1 304 -5 1449 163 22 61 chr2 65004229 65004542 -185683312 + AluJb SINE Alu 2 302 0 561 224 122 0 chr2 65004564 65004711 -185683143 - AluJb SINE Alu -1 311 147 476 238 70 43 chr2 65004783 65005039 -185682815 - L1ME LINE L1 -590 5572 5310 1937 112 0 3 chr2 65005118 65005404 -185682450 - AluSx SINE Alu -5 307 23 364 120 50 0 chr2 65005456 65005556 -185682298 + (TA)n Simple_repeat Simple_repeat 1 105 0 2047 112 3 0 chr2 65005556 65005843 -185682011 - AluSq SINE Alu -25 288 1 26 0 0 0 chr2 65005851 65005877 -185681977 + AT_rich Low_complexity Low_complexity 1 26 0 522 175 133 0 chr2 65005937 65006057 -185681797 - L1M4 LINE L1 -765 5381 5246 1162 137 6 0 chr2 65006080 65006262 -185681592 - AluSg/x SINE Alu -18 294 112 689 145 32 8 chr2 65006262 65006386 -185681468 + L1MC1 LINE L1 6207 6333 0 2138 103 10 3 chr2 65006927 65007229 -185680625 - AluSx SINE Alu -2 310 7 242 211 58 48 chr2 65007967 65008071 -185679783 + MER88 LTR ERVL 80 184 -280 * 865 257 124 61 chr2 65007997 65008392 -185679462 - MER74A LTR ERVL -87 471 44 2307 84 0 0 chr2 65008392 65008689 -185679165 + AluSg SINE Alu 1 297 -13 865 257 124 61 chr2 65008689 65008736 -185679118 - MER74A LTR ERVL -514 44 1 2295 188 84 23 chr2 65008739 65009213 -185678641 - MLT1F1 LTR MaLR 0 567 65 2434 70 0 0 chr2 65009617 65009918 -185677936 + AluY SINE Alu 2 302 -9 2265 89 3 0 chr2 65009923 65010227 -185677627 + AluSq SINE Alu 1 305 -8 2200 71 27 0 chr2 65010233 65010527 -185677327 + AluSp SINE Alu 4 305 -8 2172 75 0 7 chr2 65010654 65010936 -185676918 - AluY SINE Alu -29 282 3 559 56 14 0 chr2 65011036 65011108 -185676746 - Alu SINE Alu -237 74 2 2295 188 84 23 chr2 65011511 65011985 -185675869 + MLT1F1 LTR MaLR 65 567 0 862 262 124 61 chr2 65011988 65012035 -185675819 + MER74A LTR ERVL 1 44 -514 2296 84 0 0 chr2 65012035 65012331 -185675523 - AluSg SINE Alu -14 296 1 862 262 124 61 chr2 65012331 65012726 -185675128 + MER74A LTR ERVL 44 471 -87 242 211 58 48 chr2 65012652 65012756 -185675098 - MER88 LTR ERVL -280 184 80 * 2166 96 10 3 chr2 65013494 65013795 -185674059 + AluSx SINE Alu 7 309 -3 689 145 32 8 chr2 65014338 65014462 -185673392 - L1MC1 LINE L1 0 6333 6207 1249 131 0 0 chr2 65014462 65014645 -185673209 + AluSg/x SINE Alu 112 294 -18 522 175 133 0 chr2 65014668 65014788 -185673066 + L1M4 LINE L1 5246 5381 -765 26 0 0 0 chr2 65014848 65014874 -185672980 + AT_rich Low_complexity Low_complexity 1 26 0 1853 109 18 3 chr2 65014882 65015166 -185672688 + AluSq SINE Alu 1 288 -25 364 120 50 0 chr2 65015166 65015266 -185672588 + (TA)n Simple_repeat Simple_repeat 1 105 0 1954 108 0 3 chr2 65015318 65015604 -185672250 + AluSx SINE Alu 23 307 -5 476 238 70 43 chr2 65015683 65015939 -185671915 + L1ME LINE L1 5310 5572 -590 557 218 127 0 chr2 65016011 65016153 -185671701 + AluJb SINE Alu 147 306 -6 1418 156 19 59 chr2 65016170 65016490 -185671364 - AluJb SINE Alu -5 307 1 2210 87 0 16 chr2 65016495 65016804 -185671050 - AluSc SINE Alu -5 304 1 1348 268 92 16 chr2 65016924 65017488 -185670366 - L1MC4a LINE L1 -1747 6061 5455 489 180 11 11 chr2 65017517 65017606 -185670248 + AluJb SINE Alu 156 244 -68 2270 86 3 0 chr2 65017635 65017938 -185669916 + AluSq SINE Alu 1 304 -9 2038 110 21 0 chr2 65017944 65018234 -185669620 + AluSq SINE Alu 4 299 -14 2220 165 8 0 chr2 65018251 65018621 -185669233 + L1MC3 LINE L1 7392 7764 -21 2104 111 3 32 chr2 65018752 65019068 -185668786 + AluSx SINE Alu 1 307 -5 2077 82 7 0 chr2 65019484 65019792 -185668062 - AluY SINE Alu 0 310 1 1687 159 7 10 chr2 65019888 65020177 -185667677 + AluJo SINE Alu 1 288 -24 821 168 0 21 chr2 65020228 65020371 -185667483 + FLAM_C SINE Alu 1 140 -3 1745 156 20 7 chr2 65020574 65020876 -185666978 + AluJb SINE Alu 1 306 -6 294 312 97 0 chr2 65020878 65020971 -185666883 - MER5C DNA MER1_type -220 104 3 228 67 0 0 chr2 65020995 65021025 -185666829 + (ATTG)n Simple_repeat Simple_repeat 2 31 0 2075 76 3 21 chr2 65021025 65021313 -185666541 - AluSx SINE Alu -29 283 1 462 241 53 82 chr2 65021425 65021632 -185666222 - MLT1K LTR MaLR 0 588 388 233 339 184 0 chr2 65021633 65021742 -185666112 - MLT1K LTR MaLR -315 273 145 2130 156 100 26 chr2 65022458 65022887 -185664967 - LOR1b LTR ERV1 0 461 1 2088 96 3 10 chr2 65022941 65023265 -185664589 - AluSc SINE Alu 0 309 1 2143 113 3 0 chr2 65023265 65023565 -185664289 - AluSx SINE Alu -11 301 1 5159 147 30 21 chr2 65023768 65024133 -185663721 - L1MB3 LINE L1 0 6183 5823 1955 115 10 14 chr2 65024133 65024429 -185663425 - AluSq SINE Alu -18 295 1 5159 147 30 21 chr2 65024429 65024483 -185663371 - L1MB3 LINE L1 -360 5823 5771 1970 98 69 0 chr2 65024483 65024759 -185663095 - AluSx SINE Alu -17 295 1 5159 147 30 21 chr2 65024759 65025305 -185662549 - L1MB3 LINE L1 -412 5771 5218 2483 194 33 6 chr2 65025299 65025819 -185662035 - L1MB3 LINE L1 -2096 4050 3517 * 189 222 111 0 chr2 65026054 65026108 -185661746 + MIR3 SINE MIR 147 206 -2 1871 87 63 0 chr2 65027297 65027584 -185660270 + AluSc SINE Alu 1 305 -4 526 224 61 79 chr2 65027596 65027727 -185660127 + L1ME3A LINE L1 5338 5465 -697 1931 123 3 23 chr2 65027727 65028029 -185659825 - AluSx SINE Alu -16 296 1 526 224 61 79 chr2 65028029 65028125 -185659729 + L1ME3A LINE L1 5465 5561 -601 725 256 88 70 chr2 65028126 65028319 -185659535 + L1ME3A LINE L1 5659 5847 -323 1797 159 0 10 chr2 65028319 65028628 -185659226 - AluJb SINE Alu -4 308 3 725 256 88 70 chr2 65028628 65028937 -185658917 + L1ME3A LINE L1 5847 6170 0 2263 67 44 0 chr2 65029390 65029688 -185658166 + AluY SINE Alu 1 311 0 851 97 0 0 chr2 65029975 65030088 -185657766 + AluSq/x SINE Alu 1 113 -200 226 303 130 6 chr2 65030137 65030299 -185657555 + L1MC4 LINE L1 7526 7707 -335 512 77 66 22 chr2 65030483 65030603 -185657251 + AluSc SINE Alu 195 318 0 258 219 110 41 chr2 65030793 65030866 -185656988 - MIR3 SINE MIR -7 201 124 2184 103 0 0 chr2 65031998 65032290 -185655564 + AluSx SINE Alu 1 292 -20 515 156 10 31 chr2 65032313 65032409 -185655445 + AluJo SINE Alu 86 179 -133 2081 112 0 10 chr2 65032415 65032720 -185655134 + AluSx SINE Alu 1 302 -10 513 158 1 112 chr2 65033417 65033466 -185654388 - L1MB3 LINE L1 -3 6180 6127 2010 136 0 0 chr2 65033466 65033768 -185654086 - AluJb SINE Alu -10 302 1 513 158 1 112 chr2 65033768 65033855 -185653999 - L1MB3 LINE L1 -56 6127 6055 2193 79 20 0 chr2 65034046 65034351 -185653503 - AluY SINE Alu 0 311 1 2359 72 0 10 chr2 65034771 65035075 -185652779 + AluSg SINE Alu 1 301 -9 369 0 0 0 chr2 65035416 65035457 -185652397 + (CA)n Simple_repeat Simple_repeat 2 42 0 264 30 0 0 chr2 65035488 65035521 -185652333 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2253 46 0 7 chr2 65035524 65035808 -185652046 - AluY SINE Alu -29 282 1 2246 63 14 0 chr2 65035831 65036116 -185651738 - AluY SINE Alu -22 289 1 899 241 117 16 chr2 65036125 65036432 -185651422 - L1MC4 LINE L1 -1 8041 7704 484 257 44 9 chr2 65036481 65036594 -185651260 - MLT1F1 LTR MaLR -431 136 20 622 208 139 6 chr2 65036599 65036772 -185651082 - L1MC4 LINE L1 -1388 6654 6459 27 29 0 0 chr2 65037071 65037105 -185650749 + AT_rich Low_complexity Low_complexity 1 34 0 288 100 300 0 chr2 65037195 65037245 -185650609 + Tigger2 DNA MER2_type 5 69 -2649 * 1685 80 18 58 chr2 65037243 65037450 -185650404 + Tigger2 DNA MER2_type 2280 2475 -243 2082 121 3 0 chr2 65037450 65037747 -185650107 - AluSx SINE Alu -14 298 1 1685 80 18 58 chr2 65037747 65037814 -185650040 + Tigger2 DNA MER2_type 2475 2543 -175 1017 41 0 8 chr2 65037819 65037942 -185649912 + AluY SINE Alu 1 122 -189 515 82 14 0 chr2 65038042 65038115 -185649739 - AluSg1 SINE Alu -219 90 17 197 208 21 0 chr2 65038833 65038881 -185648973 - L2 LINE L2 -1 3312 3264 2277 102 14 0 chr2 65039602 65039896 -185647958 - AluSx SINE Alu -14 298 1 258 286 113 23 chr2 65040135 65040268 -185647586 + L2 LINE L2 3125 3269 -3 341 189 147 68 chr2 65040361 65040551 -185647303 - MER112 DNA MER1_type -55 205 1 220 195 24 0 chr2 65040626 65040667 -185647187 + L2 LINE L2 3264 3305 -8 496 255 52 39 chr2 65040959 65041137 -185646717 + MIR SINE MIR 1 173 -80 306 73 0 0 chr2 65041165 65041206 -185646648 + MER34B LTR ERV1 25 65 -500 864 162 0 0 chr2 65041653 65041789 -185646065 - FRAM SINE Alu -30 146 11 804 223 1 11 chr2 65041947 65042122 -185645732 + MLT1E LTR MaLR 1 175 -392 2460 87 0 0 chr2 65042127 65042426 -185645428 - AluSc SINE Alu -10 299 1 2399 79 0 7 chr2 65042426 65042729 -185645125 - AluSx SINE Alu -11 301 1 198 167 0 0 chr2 65042764 65042800 -185645054 + CT-rich Low_complexity Low_complexity 2 37 0 263 273 61 10 chr2 65042867 65042966 -185644888 - L1ME LINE L1 -469 5652 5549 1000 185 32 26 chr2 65042970 65043159 -185644695 - Tigger2 DNA MER2_type -10 2708 2519 1595 128 8 0 chr2 65043972 65044207 -185643647 - AluSg SINE Alu -61 249 13 188 208 21 0 chr2 65044921 65044969 -185642885 - L2 LINE L2 -1 3312 3264 250 255 226 34 chr2 65045050 65045285 -185642569 + L2 LINE L2 2854 3133 -180 1806 205 77 2 chr2 65045359 65045788 -185642066 - L1MB7 LINE L1 -1 6183 5723 1134 169 73 5 chr2 65046756 65046975 -185640879 - AluJb SINE Alu -78 234 1 208 234 93 65 chr2 65047382 65047489 -185640365 + MIR SINE MIR 118 227 -35 250 202 22 56 chr2 65048179 65048268 -185639586 + CT-rich Low_complexity Low_complexity 3 88 0 346 215 13 13 chr2 65048348 65048427 -185639427 - MER33 DNA MER1_type 0 363 285 914 169 155 118 chr2 65048432 65048728 -185639126 + AluJo SINE Alu 1 307 -5 1292 149 48 4 chr2 65048728 65048956 -185638898 - MER33 DNA MER1_type -85 239 2 898 219 7 0 chr2 65049608 65049763 -185638091 + L2 LINE L2 3117 3272 0 2148 110 3 7 chr2 65054965 65055275 -185632579 - AluSc SINE Alu 0 309 1 195 129 0 0 chr2 65057091 65057122 -185630732 + (TA)n Simple_repeat Simple_repeat 2 32 0 189 328 16 0 chr2 65057146 65057207 -185630647 - MIR SINE MIR -102 106 45 222 37 0 0 chr2 65059070 65059097 -185628757 + (A)n Simple_repeat Simple_repeat 1 27 0 1016 210 144 30 chr2 65059505 65059810 -185628044 - MER58B DNA MER1_type -1 340 1 526 154 0 13 chr2 65060131 65060209 -185627645 + MER58C DNA MER1_type 2 78 -137 1146 198 20 59 chr2 65060210 65060382 -185627472 - AluJo SINE Alu -21 291 114 2249 88 17 0 chr2 65060382 65060679 -185627175 + AluSp SINE Alu 1 302 -11 1576 135 163 0 chr2 65060685 65060930 -185626924 + AluSg SINE Alu 1 285 -15 1146 198 20 59 chr2 65060930 65061053 -185626801 - AluJo SINE Alu -203 109 1 409 197 48 122 chr2 65061053 65061100 -185626754 + MER58C DNA MER1_type 77 126 -2294 2306 98 3 0 chr2 65061100 65061395 -185626459 + AluSg SINE Alu 1 296 -14 409 197 48 122 chr2 65061395 65061494 -185626360 + MER58C DNA MER1_type 126 212 -3 917 186 0 12 chr2 65061614 65061781 -185626073 - AluSg/x SINE Alu -13 297 133 2408 69 13 0 chr2 65061786 65062091 -185625763 - AluY SINE Alu -2 309 1 2487 72 0 10 chr2 65062511 65062817 -185625037 + AluSg SINE Alu 1 303 -7 1759 177 3 3 chr2 65063366 65063529 -185624325 - AluJb SINE Alu -13 299 134 2376 66 9 31 chr2 65063529 65063846 -185624008 - AluY SINE Alu -1 310 1 1759 177 3 3 chr2 65063846 65063981 -185623873 - AluJb SINE Alu -177 135 1 1481 190 13 13 chr2 65063989 65064289 -185623565 - AluJb SINE Alu -12 300 1 1778 121 50 35 chr2 65064449 65064731 -185623123 + AluSx SINE Alu 1 286 -26 228 295 38 109 chr2 65064784 65064967 -185622887 - MIR SINE MIR -73 189 20 394 176 22 22 chr2 65064967 65065058 -185622796 + MER113 DNA MER1_type? 1 91 -430 1063 157 0 0 chr2 65065060 65065219 -185622635 - FRAM SINE Alu -18 158 1 2120 97 0 7 chr2 65065237 65065515 -185622339 - AluSc SINE Alu -33 276 1 21 36 0 0 chr2 65065532 65065560 -185622294 + AT_rich Low_complexity Low_complexity 1 28 0 469 250 9 0 chr2 65065795 65065903 -185621951 - L1MC/D LINE L1 -2019 5789 5681 2121 117 0 0 chr2 65066045 65066328 -185621526 + AluSg SINE Alu 1 283 -27 252 283 87 36 chr2 65066337 65066475 -185621379 - L1MC/D LINE L1 -2401 5407 5263 369 349 91 45 chr2 65066502 65066719 -185621135 - L1MC/D LINE L1 -914 5232 5026 2294 96 0 0 chr2 65066719 65067012 -185620842 - AluSq SINE Alu -20 293 1 369 349 91 45 chr2 65067012 65067279 -185620575 - L1MC/D LINE L1 -1120 5026 4726 21 36 0 0 chr2 65067389 65067417 -185620437 + AT_rich Low_complexity Low_complexity 1 28 0 1082 165 15 35 chr2 65067526 65067726 -185620128 - AluJb SINE Alu -30 282 87 610 233 87 23 chr2 65068497 65068669 -185619185 - MER3 DNA MER1_type -8 201 19 2258 96 10 7 chr2 65068669 65068970 -185618884 - AluSc SINE Alu -7 302 1 285 213 46 35 chr2 65069695 65069788 -185618066 + L1ME3 LINE L1 5988 6081 -83 22 0 0 0 chr2 65071061 65071083 -185616771 + AT_rich Low_complexity Low_complexity 1 22 0 1504 157 8 20 chr2 65072349 65072604 -185615250 - AluJo SINE Alu -48 264 13 460 224 56 9 chr2 65075021 65075128 -185612726 + L2 LINE L2 3197 3308 -5 261 125 375 14 chr2 65075555 65075627 -185612227 + MER4A LTR ERV1 1 98 -566 1819 124 8 57 chr2 65075627 65075990 -185611864 + MER4A LTR ERV1 261 664 0 6814 134 74 20 chr2 65076868 65078035 -185609819 + Tigger3b DNA MER2_type 1 1230 -1 1175 128 46 50 chr2 65078175 65078393 -185609461 - AluJb SINE Alu -14 298 82 763 125 83 0 chr2 65079555 65079675 -185608179 + AluSq/x SINE Alu 2 131 -182 1699 142 65 0 chr2 65080488 65080763 -185607091 - AluJb SINE Alu -19 293 1 293 274 198 19 chr2 65082988 65083145 -185604709 - MIR SINE MIR -21 241 57 212 200 18 0 chr2 65083156 65083211 -185604643 + (TAA)n Simple_repeat Simple_repeat 2 57 0 364 233 135 62 chr2 65083214 65083407 -185604447 - MIR SINE MIR -46 216 10 21 57 0 0 chr2 65083537 65083572 -185604282 + AT_rich Low_complexity Low_complexity 1 35 0 2534 80 0 0 chr2 65083773 65084084 -185603770 + AluY SINE Alu 1 311 0 2203 126 3 0 chr2 65084091 65084393 -185603461 + AluSx SINE Alu 1 303 -9 228 298 184 21 chr2 65084692 65084833 -185603021 - L3 LINE CR1 -223 1354 1191 2199 88 3 7 chr2 65085128 65085452 -185602402 + AluSg SINE Alu 1 323 0 273 339 40 8 chr2 65085452 65085576 -185602278 - L1ME LINE L1 -504 5617 5490 3502 164 154 98 chr2 65085852 65086385 -185601469 - L1MC3 LINE L1 -7 7778 7276 372 222 62 0 chr2 65086385 65086466 -185601388 - MLT1F1 LTR MaLR -433 134 49 3502 164 154 98 chr2 65086466 65086843 -185601011 - L1MC3 LINE L1 -509 7276 6721 2130 143 0 0 chr2 65086843 65087143 -185600711 + AluSx SINE Alu 1 300 -12 3502 164 154 98 chr2 65087143 65087227 -185600627 - L1MC3 LINE L1 -1064 6721 6643 25 51 0 0 chr2 65087227 65087266 -185600588 + AT_rich Low_complexity Low_complexity 1 39 0 270 0 0 0 chr2 65087606 65087636 -185600218 + (A)n Simple_repeat Simple_repeat 1 30 0 990 222 52 5 chr2 65088354 65088566 -185599288 + MER58A DNA MER1_type 3 224 0 1221 134 179 0 chr2 65089317 65089563 -185598291 - L1MA8 LINE L1 -3 6288 5999 2175 112 3 3 chr2 65090148 65090451 -185597403 - AluJb SINE Alu -9 303 1 651 261 87 0 chr2 65091116 65091277 -185596577 - FRAM SINE Alu 0 176 2 3475 242 70 44 chr2 65091298 65092839 -185595015 - L1MC5 LINE L1 -45 7916 6338 1631 198 27 6 chr2 65093081 65093409 -185594445 + MER82 DNA MER2_type 23 357 -296 833 216 29 0 chr2 65093409 65093580 -185594274 - FAM SINE Alu -9 40 1 1258 266 10 20 chr2 65093583 65093888 -185593966 + MER82 DNA MER2_type 352 653 0 207 100 0 0 chr2 65093889 65093919 -185593935 + (CA)n Simple_repeat Simple_repeat 2 31 0 811 280 108 3 chr2 65093949 65094256 -185593598 - L1MC5 LINE L1 -1888 5920 5582 219 139 0 0 chr2 65094617 65094653 -185593201 + (TTC)n Simple_repeat Simple_repeat 3 38 0 2148 100 14 0 chr2 65094888 65095205 -185592649 + AluSx SINE Alu 2 322 0 347 346 108 0 chr2 65095478 65095663 -185592191 + MIR SINE MIR 2 206 -56 24 0 0 0 chr2 65096192 65096216 -185591638 + AT_rich Low_complexity Low_complexity 1 24 0 475 199 115 32 chr2 65096694 65096850 -185591004 + L1MC4 LINE L1 7873 8041 -1 2333 76 3 0 chr2 65096859 65097148 -185590706 + AluY SINE Alu 1 290 -21 2067 80 7 11 chr2 65097171 65097457 -185590397 + AluY SINE Alu 1 285 -26 1979 161 0 0 chr2 65098469 65098768 -185589086 - AluJb SINE Alu -13 299 1 1863 153 8 62 chr2 65098948 65099333 -185588521 + THE1B LTR MaLR 1 364 0 23 33 0 0 chr2 65099689 65099719 -185588135 + AT_rich Low_complexity Low_complexity 1 30 0 877 53 0 0 chr2 65099912 65100025 -185587829 + L1PA5 LINE L1 6039 6151 -3 257 91 114 0 chr2 65100055 65100099 -185587755 - L1MB8 LINE L1 0 6178 6130 2144 90 10 17 chr2 65100705 65100995 -185586859 - AluSc SINE Alu -21 288 1 29 70 0 0 chr2 65101581 65101638 -185586216 + AT_rich Low_complexity Low_complexity 1 57 0 1522 172 19 0 chr2 65102578 65102845 -185585009 + AluSx SINE Alu 18 289 -23 1960 110 40 4 chr2 65103214 65103511 -185584343 - AluSx SINE Alu 0 307 1 1723 155 3 32 chr2 65103737 65104046 -185583808 + AluJo SINE Alu 1 300 -12 21 71 0 0 chr2 65104576 65104618 -185583236 + AT_rich Low_complexity Low_complexity 1 42 0 236 172 35 0 chr2 65104795 65104853 -185583001 + (TGAG)n Simple_repeat Simple_repeat 3 62 0 1128 130 7 0 chr2 65104866 65105020 -185582834 - AluJb SINE Alu -30 282 128 681 166 129 6 chr2 65105100 65105153 -185582701 + L1MA7 LINE L1 5938 5983 -308 210 71 0 0 chr2 65105153 65105181 -185582673 + (GGGTG)n Simple_repeat Simple_repeat 3 30 0 681 166 129 6 chr2 65105181 65105290 -185582564 + L1MA7 LINE L1 5983 6120 -171 575 395 140 40 chr2 65105493 65106020 -185581834 + L1MC4 LINE L1 7461 8040 -2 1557 198 6 25 chr2 65106407 65106725 -185581129 + AluJb SINE Alu 1 312 0 194 284 135 57 chr2 65106962 65107103 -185580751 + MIR SINE MIR 2 153 -109 2045 121 3 0 chr2 65107783 65108073 -185579781 + AluSx SINE Alu 1 291 -21 2310 148 37 35 chr2 65108857 65109288 -185578566 + Tigger2a DNA MER2_type 1 432 -2 501 239 60 15 chr2 65109290 65109424 -185578430 + LTR50 LTR ERVL 18 157 -638 426 273 90 26 chr2 65109520 65109825 -185578029 + LTR33A LTR ERVL 297 512 -11 27 0 0 0 chr2 65110601 65110628 -185577226 + AT_rich Low_complexity Low_complexity 1 27 0 37 69 0 0 chr2 65110791 65110863 -185576991 + AT_rich Low_complexity Low_complexity 1 72 0 488 221 96 30 chr2 65111078 65111277 -185576577 + L1ME2 LINE L1 4864 5075 -1071 258 212 45 0 chr2 65111303 65111369 -185576485 + L1ME2 LINE L1 5144 5212 -934 2013 255 120 11 chr2 65111459 65112193 -185575661 + L1ME2 LINE L1 5341 6154 -10 1844 144 99 0 chr2 65112381 65112813 -185575041 + L1M4 LINE L1 5267 5764 -406 406 179 11 41 chr2 65112918 65113018 -185574836 + L1MB7 LINE L1 5361 5450 -712 1572 196 181 22 chr2 65113036 65113499 -185574355 + L1MB7 LINE L1 5632 6168 -16 746 78 10 0 chr2 65113782 65113884 -185573970 + MER30B DNA MER1_type 4 106 -84 200 35 35 0 chr2 65113946 65113975 -185573879 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 191 234 0 0 chr2 65114217 65114264 -185573590 - MER5C DNA MER1_type -50 274 228 349 256 23 12 chr2 65114275 65114361 -185573493 - MER5C DNA MER1_type -200 124 38 26 0 0 0 chr2 65114473 65114499 -185573355 + AT_rich Low_complexity Low_complexity 1 26 0 1791 186 0 0 chr2 65115032 65115338 -185572516 + AluJo SINE Alu 5 310 -2 2353 71 0 3 chr2 65115359 65115653 -185572201 + AluY SINE Alu 1 293 -18 1823 127 4 8 chr2 65115746 65116013 -185571841 - AluSq SINE Alu -45 268 3 1561 200 3 7 chr2 65117272 65117581 -185570273 + AluSx SINE Alu 1 308 0 261 253 124 13 chr2 65117913 65118083 -185569771 + L1M2 LINE L1 5389 5588 -709 897 65 0 0 chr2 65119041 65119149 -185568705 - AluSp/q SINE Alu -16 297 190 2166 94 3 55 chr2 65119535 65119863 -185567991 + AluY SINE Alu 1 311 0 434 246 12 82 chr2 65120717 65120766 -185567088 + L2 LINE L2 2174 2225 -1089 1577 207 7 3 chr2 65120766 65121075 -185566779 + AluJo SINE Alu 1 310 -2 434 246 12 82 chr2 65121075 65121196 -185566658 + L2 LINE L2 2225 2332 -982 258 296 82 19 chr2 65121510 65121669 -185566185 + Charlie2 DNA MER1_type 116 284 -2578 1417 231 93 54 chr2 65121677 65122214 -185565640 + MER68 LTR ERV1 1 558 -4 2121 119 0 20 chr2 65122358 65122524 -185565330 - AluSg SINE Alu -13 297 138 2206 84 0 23 chr2 65122524 65122832 -185565022 - AluY SINE Alu -8 303 3 2121 119 0 20 chr2 65122832 65122967 -185564887 - AluSg SINE Alu -172 138 2 294 174 0 0 chr2 65123118 65123162 -185564692 - MLT1A1 LTR MaLR 0 365 322 229 182 0 0 chr2 65123162 65123195 -185564659 + Alu SINE Alu 1 33 -269 979 190 63 68 chr2 65123200 65123543 -185564311 + MSTB LTR MaLR 27 432 0 942 198 137 41 chr2 65123632 65124092 -185563762 + Charlie2 DNA MER1_type 2095 2598 -264 1410 169 26 34 chr2 65124092 65124358 -185563496 - AluJb SINE Alu -26 286 23 247 254 132 34 chr2 65124392 65124597 -185563257 + Charlie2 DNA MER1_type 2638 2862 0 1343 194 28 0 chr2 65124699 65124983 -185562871 - L1MA4 LINE L1 -10 6290 5999 1348 176 38 107 chr2 65125005 65125352 -185562502 + MLT1A1 LTR MaLR 1 320 -45 1986 134 10 0 chr2 65125352 65125650 -185562204 - AluSx SINE Alu -11 301 1 1348 176 38 107 chr2 65125650 65125694 -185562160 + MLT1A1 LTR MaLR 320 365 0 22 0 0 0 chr2 65125705 65125727 -185562127 + AT_rich Low_complexity Low_complexity 1 22 0 1733 99 3 74 chr2 65125916 65126199 -185561655 + AluSx SINE Alu 1 263 -49 377 245 7 71 chr2 65126478 65126633 -185561221 + GA-rich Low_complexity Low_complexity 3 147 0 848 272 89 66 chr2 65126864 65127044 -185560810 + L2 LINE L2 2287 2461 -853 2405 86 0 0 chr2 65127044 65127346 -185560508 + AluY SINE Alu 1 302 -9 848 272 89 66 chr2 65127346 65127636 -185560218 + L2 LINE L2 2461 2768 -546 268 265 150 55 chr2 65128200 65128351 -185559503 + L1ME LINE L1 4569 4704 -1442 2031 130 14 0 chr2 65128351 65128643 -185559211 + AluSx SINE Alu 1 296 -16 268 265 150 55 chr2 65128643 65128838 -185559016 + L1ME LINE L1 4704 4948 -1198 2057 145 0 0 chr2 65129022 65129326 -185558528 + AluSx SINE Alu 1 304 -8 385 273 82 49 chr2 65129401 65129786 -185558068 + L1ME LINE L1 5260 5653 -468 1802 160 0 7 chr2 65129910 65130197 -185557657 + AluJb SINE Alu 1 285 -27 1285 212 68 0 chr2 65130250 65130371 -185557483 + AluJo SINE Alu 1 112 -200 180 0 0 0 chr2 65130371 65130391 -185557463 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1285 212 68 0 chr2 65130391 65130533 -185557321 + AluJo SINE Alu 112 282 -30 313 241 25 13 chr2 65130696 65130775 -185557079 + MIR SINE MIR 92 171 -91 28 61 0 0 chr2 65132306 65132355 -185555499 + AT_rich Low_complexity Low_complexity 1 49 0 24 53 0 0 chr2 65132913 65132951 -185554903 + AT_rich Low_complexity Low_complexity 1 38 0 802 144 0 0 chr2 65133152 65133270 -185554584 - FLAM_C SINE Alu -25 118 1 1529 185 7 30 chr2 65133357 65133659 -185554195 - AluJo SINE Alu -17 295 1 1340 124 0 84 chr2 65134173 65134234 -185553620 + AluSg/x SINE Alu 86 151 -161 2100 110 0 7 chr2 65134234 65134525 -185553329 + AluSg SINE Alu 5 293 -17 2091 124 7 3 chr2 65134531 65134838 -185553016 + AluSq SINE Alu 1 308 -5 1340 124 0 84 chr2 65134838 65134995 -185552859 + AluSg/x SINE Alu 156 292 -20 5161 129 18 12 chr2 65134995 65135834 -185552020 + L1PA15 LINE L1 5322 6165 0 186 40 0 0 chr2 65135880 65135899 -185551955 + (A)n Simple_repeat Simple_repeat 1 20 0 2187 92 48 0 chr2 65135899 65136194 -185551660 - AluSg SINE Alu -1 309 1 3479 148 60 21 chr2 65136334 65137038 -185550816 - L1MB3 LINE L1 -3 6180 5450 22 35 0 0 chr2 65137372 65137401 -185550453 + AT_rich Low_complexity Low_complexity 1 29 0 1769 184 7 0 chr2 65138332 65138626 -185549228 + AluSx SINE Alu 1 296 -16 2160 120 3 0 chr2 65138718 65139038 -185548816 - AluSx SINE Alu 0 312 3 264 341 94 36 chr2 65139182 65139405 -185548449 + L2 LINE L2 2622 2857 -457 1246 189 117 4 chr2 65139681 65139945 -185547909 - AluJo SINE Alu -8 294 1 1701 101 118 42 chr2 65140113 65140400 -185547454 - AluSc SINE Alu 0 309 1 31 58 0 0 chr2 65141001 65141053 -185546801 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr2 65141321 65141342 -185546512 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 65141422 65141443 -185546411 + AT_rich Low_complexity Low_complexity 1 21 0 741 145 29 14 chr2 65141976 65142114 -185545740 - Tigger7 DNA MER2_type -9 2482 2343 * 1304 185 86 0 chr2 65142108 65142351 -185545503 - Tigger7 DNA MER2_type -2142 345 82 495 298 76 0 chr2 65142377 65142535 -185545319 - MIR SINE MIR -2 260 91 300 269 50 17 chr2 65142579 65142698 -185545156 - L2 LINE L2 -969 2345 2223 1271 210 66 0 chr2 65142896 65143167 -185544687 + AluJb SINE Alu 10 298 -14 599 168 0 10 chr2 65143243 65143344 -185544510 - AluJ/FLAM SINE Alu -212 100 1 2244 118 0 0 chr2 65143983 65144289 -185543565 + AluSx SINE Alu 1 306 -6 273 119 0 0 chr2 65145596 65145638 -185542216 + (CTG)n Simple_repeat Simple_repeat 1 42 0 22 56 0 0 chr2 65145985 65146021 -185541833 + AT_rich Low_complexity Low_complexity 1 36 0 2302 75 0 0 chr2 65146785 65147107 -185540747 - AluY SINE Alu 0 322 1 329 277 0 0 chr2 65147520 65147603 -185540251 + MIR SINE MIR 131 213 -49 1437 144 144 15 chr2 65147735 65147998 -185539856 - AluSg SINE Alu -13 297 1 1941 192 122 2 chr2 65148415 65148826 -185539028 + Tigger7 DNA MER2_type 4 463 -270 411 98 73 12 chr2 65148838 65148920 -185538934 + Tigger7 DNA MER2_type 2384 2470 -117 877 187 35 10 chr2 65148974 65149172 -185538682 + Tigger7 DNA MER2_type 2284 2486 -1 435 276 8 52 chr2 65149596 65149730 -185538124 - L2 LINE L2 0 3272 3145 1879 159 30 0 chr2 65149760 65150062 -185537792 - AluSx SINE Alu -1 311 1 550 136 0 0 chr2 65150086 65150167 -185537687 + AluSg/x SINE Alu 215 295 -17 840 230 7 0 chr2 65150267 65150419 -185537435 + FRAM SINE Alu 1 145 -31 29 78 0 0 chr2 65151361 65151425 -185536429 + AT_rich Low_complexity Low_complexity 1 64 0 252 250 0 0 chr2 65152144 65152200 -185535654 - L2 LINE L2 -36 3277 3222 837 181 0 0 chr2 65153000 65153133 -185534721 + FLAM_C SINE Alu 1 133 0 2767 213 37 48 chr2 65153692 65153909 -185533945 + L1MB7 LINE L1 5357 5575 -609 1874 128 25 4 chr2 65153909 65154190 -185533664 + AluSx SINE Alu 1 287 -25 2767 213 37 48 chr2 65154190 65154234 -185533620 + L1MB7 LINE L1 5575 5618 -566 2034 108 23 13 chr2 65154234 65154539 -185533315 + AluSq SINE Alu 6 313 0 2767 213 37 48 chr2 65154539 65155092 -185532762 + L1MB7 LINE L1 5618 6163 -21 1665 182 3 7 chr2 65155092 65155394 -185532460 + AluJo SINE Alu 1 301 -11 246 196 161 0 chr2 65155397 65155453 -185532401 + AluJ/F(R)AM SINE Alu 138 202 -100 317 163 31 10 chr2 65155478 65155576 -185532278 + (TA)n Simple_repeat Simple_repeat 2 101 0 235 278 19 0 chr2 65156369 65156423 -185531431 - MER91C DNA MER1_type -32 108 54 26 0 0 0 chr2 65156496 65156522 -185531332 + AT_rich Low_complexity Low_complexity 1 26 0 2103 104 38 0 chr2 65156532 65156821 -185531033 - AluSx SINE Alu -12 300 1 465 240 104 93 chr2 65156936 65157205 -185530649 + L1MC5 LINE L1 7363 7627 -334 1574 152 9 67 chr2 65157205 65157521 -185530333 + AluJo SINE Alu 1 298 -14 465 240 104 93 chr2 65157521 65157780 -185530074 + L1MC5 LINE L1 7627 7897 -64 1037 135 40 178 chr2 65158237 65158291 -185529563 + L1MA9 LINE L1 5988 6048 -264 1955 127 17 10 chr2 65158291 65158591 -185529263 - AluSx SINE Alu -4 308 7 1037 135 40 178 chr2 65158591 65158907 -185528947 + L1MA9 LINE L1 6048 6307 -5 2237 121 0 0 chr2 65158980 65159285 -185528569 - AluSc SINE Alu -4 305 1 1804 148 19 29 chr2 65161213 65161524 -185526330 - AluJb SINE Alu 0 312 5 2337 95 7 0 chr2 65161547 65161853 -185526001 - AluSq SINE Alu -5 308 1 311 356 89 36 chr2 65161874 65162099 -185525755 + L2 LINE L2 2825 3061 -211 2834 133 40 40 chr2 65162432 65162934 -185524920 + Tigger1 DNA MER2_type 1 502 -1916 468 0 0 0 chr2 65162958 65163010 -185524844 + (CA)n Simple_repeat Simple_repeat 1 52 0 2126 75 7 14 chr2 65163405 65163685 -185524169 + AluY SINE Alu 22 299 -12 2150 79 39 0 chr2 65163954 65164233 -185523621 - AluY SINE Alu -21 290 1 1870 161 7 0 chr2 65164235 65164526 -185523328 - AluSq SINE Alu -18 295 3 2048 120 3 3 chr2 65164710 65164994 -185522860 - AluSg1 SINE Alu -23 286 3 22 0 0 0 chr2 65165526 65165548 -185522306 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr2 65165658 65165692 -185522162 + AT_rich Low_complexity Low_complexity 1 34 0 411 21 0 0 chr2 65166109 65166157 -185521697 + (CA)n Simple_repeat Simple_repeat 2 49 0 2003 116 20 10 chr2 65166507 65166799 -185521055 - AluSq SINE Alu -17 296 2 2265 90 0 0 chr2 65166811 65167101 -185520753 - AluSq SINE Alu -23 290 1 24 0 0 0 chr2 65167212 65167236 -185520618 + AT_rich Low_complexity Low_complexity 1 24 0 2051 121 14 0 chr2 65167246 65167535 -185520319 + AluSc SINE Alu 1 293 -16 1817 148 7 20 chr2 65167988 65168291 -185519563 + AluSx SINE Alu 1 299 -13 636 409 0 13 chr2 65168668 65168965 -185518889 + G-rich Low_complexity Low_complexity 1 293 0 391 540 0 0 chr2 65168985 65169109 -185518745 + G-rich Low_complexity Low_complexity 1 124 0 1387 125 0 0 chr2 65169119 65169319 -185518535 + AluSg/x SINE Alu 106 305 -7 463 305 195 0 chr2 65170141 65170413 -185517441 + L2 LINE L2 2825 3149 -164 323 189 0 14 chr2 65170447 65170521 -185517333 + GA-rich Low_complexity Low_complexity 2 74 0 2071 101 7 4 chr2 65171574 65171851 -185516003 - AluSc SINE Alu -19 290 13 180 0 0 0 chr2 65171869 65171889 -185515965 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1953 128 7 0 chr2 65171890 65172164 -185515690 - AluSx SINE Alu -35 277 2 1546 218 37 3 chr2 65172387 65172740 -185515114 + MLT1A1 LTR MaLR 1 365 0 25 0 0 0 chr2 65172980 65173005 -185514849 + AT_rich Low_complexity Low_complexity 1 25 0 2084 102 25 0 chr2 65173016 65173300 -185514554 + AluSg SINE Alu 4 294 -16 373 257 97 65 chr2 65173443 65173735 -185514119 + L1MCa LINE L1 1154 1492 -4832 5920 43 35 0 chr2 65173862 65174633 -185513221 - L1PA5 LINE L1 -796 5350 4553 6764 36 5 0 chr2 65174633 65175438 -185512416 + L1PA5 LINE L1 5334 6150 -4 434 177 48 118 chr2 65175537 65175723 -185512131 + L1MCa LINE L1 1777 1949 -4658 1817 169 0 3 chr2 65175734 65176042 -185511812 + AluJb SINE Alu 1 307 -5 302 291 92 48 chr2 65176042 65176261 -185511593 + L1MCa LINE L1 1170 1401 -5025 1254 256 68 75 chr2 65176299 65176727 -185511127 + HAL1 LINE L1 1043 1473 -1034 1628 164 26 4 chr2 65176727 65176996 -185510858 + AluSx SINE Alu 1 275 -37 264 30 0 0 chr2 65177000 65177033 -185510821 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1254 256 68 75 chr2 65177033 65177428 -185510426 + HAL1 LINE L1 1476 1865 -642 696 298 71 6 chr2 65178162 65178484 -185509370 + L1MC4a LINE L1 5581 5923 -1885 254 122 0 20 chr2 65178490 65178539 -185509315 + (TA)n Simple_repeat Simple_repeat 2 49 0 258 105 0 0 chr2 65178625 65178663 -185509191 + (TA)n Simple_repeat Simple_repeat 2 39 0 586 187 324 67 chr2 65179061 65179376 -185508478 + MSTD LTR MaLR 1 396 0 346 183 0 32 chr2 65179395 65179488 -185508366 + GA-rich Low_complexity Low_complexity 3 92 0 451 231 87 131 chr2 65180632 65180861 -185506993 - MER20 DNA MER1_type 0 219 1 23 0 0 0 chr2 65181571 65181594 -185506260 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr2 65183050 65183084 -185504770 + AT_rich Low_complexity Low_complexity 1 34 0 2006 117 10 13 chr2 65183343 65183641 -185504213 - AluSx SINE Alu -15 297 1 1664 123 15 38 chr2 65183884 65184145 -185503709 + AluSx SINE Alu 1 255 -57 2088 128 0 0 chr2 65184269 65184559 -185503295 + AluSx SINE Alu 1 290 -22 1999 132 3 3 chr2 65184569 65184872 -185502982 + AluSx SINE Alu 1 303 -9 260 179 6 0 chr2 65184937 65184991 -185502863 - Alu SINE Alu -8 292 248 1984 152 0 0 chr2 65185210 65185500 -185502354 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr2 65185785 65185806 -185502048 + AT_rich Low_complexity Low_complexity 1 21 0 34 0 0 0 chr2 65185856 65185890 -185501964 + AT_rich Low_complexity Low_complexity 1 34 0 1747 159 55 3 chr2 65185890 65186179 -185501675 + AluJb SINE Alu 2 305 -7 21 36 0 0 chr2 65186920 65186948 -185500906 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 65187297 65187327 -185500527 + AT_rich Low_complexity Low_complexity 1 30 0 4121 176 41 40 chr2 65187370 65187528 -185500326 - MER6 DNA MER2_type 0 865 709 1907 148 7 3 chr2 65187528 65187826 -185500028 + AluSx SINE Alu 1 299 -13 4121 176 41 40 chr2 65187826 65188489 -185499365 - MER6 DNA MER2_type -156 709 43 1568 157 29 52 chr2 65188551 65188693 -185499161 + AluJo SINE Alu 3 147 -165 2096 117 3 0 chr2 65188693 65188991 -185498863 + AluSq SINE Alu 1 299 -14 1568 157 29 52 chr2 65188991 65189154 -185498700 + AluJo SINE Alu 147 301 -11 2334 96 0 3 chr2 65189155 65189456 -185498398 + AluSc SINE Alu 1 300 -9 2342 99 0 3 chr2 65189911 65190225 -185497629 + AluSp SINE Alu 1 313 0 1054 188 20 20 chr2 65191061 65191194 -185496660 + AluJo SINE Alu 1 136 -176 2455 59 0 13 chr2 65191194 65191499 -185496355 + AluY SINE Alu 1 301 -10 1054 188 20 20 chr2 65191499 65191567 -185496287 + AluJo SINE Alu 135 202 -110 1522 190 27 14 chr2 65192457 65192752 -185495102 + AluJb SINE Alu 1 299 -13 27 0 0 0 chr2 65192765 65192792 -185495062 + AT_rich Low_complexity Low_complexity 1 27 0 * 1698 187 13 29 chr2 65192789 65193254 -185494600 + L1PB4 LINE L1 5727 6166 0 21 36 0 0 chr2 65193586 65193614 -185494240 + AT_rich Low_complexity Low_complexity 1 28 0 1735 110 7 76 chr2 65194190 65194491 -185493363 - AluSx SINE Alu -30 282 3 1987 130 13 10 chr2 65194742 65195049 -185492805 - AluSx SINE Alu -4 308 1 1953 122 13 22 chr2 65195981 65196293 -185491561 + AluSq SINE Alu 4 312 -1 21 82 0 0 chr2 65196293 65196342 -185491512 + AT_rich Low_complexity Low_complexity 1 49 0 2093 121 0 13 chr2 65196979 65197284 -185490570 - AluSp SINE Alu -10 303 3 26 0 0 0 chr2 65197401 65197427 -185490427 + AT_rich Low_complexity Low_complexity 1 26 0 185 227 197 15 chr2 65197711 65197777 -185490077 - MIR SINE MIR -29 233 156 270 290 134 54 chr2 65198052 65198238 -185489616 + MIR SINE MIR 2 202 -60 189 318 0 0 chr2 65199650 65199694 -185488160 + L2 LINE L2 3209 3252 -20 1173 194 31 4 chr2 65201217 65201444 -185486410 - MER46A DNA MER2_type -3 233 1 1445 201 20 10 chr2 65203429 65203722 -185484132 + AluSx SINE Alu 1 296 -6 1503 177 72 4 chr2 65204108 65204385 -185483469 - AluJo SINE Alu -14 298 3 2065 154 0 0 chr2 65204489 65204800 -185483054 + AluSx SINE Alu 1 311 -1 254 237 0 0 chr2 65204898 65204957 -185482897 - L1ME LINE L1 -265 5856 5798 1494 229 62 62 chr2 65204978 65205416 -185482438 - L1ME3A LINE L1 -7 6163 5723 1796 153 7 17 chr2 65205416 65205717 -185482137 - AluJb SINE Alu -14 298 1 1494 229 62 62 chr2 65205717 65205838 -185482016 - L1ME3A LINE L1 -446 5724 5604 1952 145 3 0 chr2 65206001 65206297 -185481557 + AluSx SINE Alu 1 297 -15 274 113 132 0 chr2 65206789 65206842 -185481012 - L1MA10 LINE L1 -18 6316 6257 188 33 0 33 chr2 65207781 65207811 -185480043 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 599 181 17 9 chr2 65207815 65207931 -185479923 - FLAM_C SINE Alu -25 118 2 1811 195 71 36 chr2 65208232 65208833 -185479021 - L1ME LINE L1 -375 5791 5188 1312 272 109 36 chr2 65208907 65209336 -185478518 - L1MB7 LINE L1 -126 6058 5662 1881 185 50 29 chr2 65209336 65209715 -185478139 + MSTB LTR MaLR 1 391 -35 2144 123 0 7 chr2 65209715 65210025 -185477829 - AluSx SINE Alu -3 309 2 1881 185 50 29 chr2 65210025 65210062 -185477792 + MSTB LTR MaLR 391 426 0 1312 272 109 36 chr2 65210062 65210256 -185477598 - L1MB7 LINE L1 -522 5662 5376 2228 116 0 34 chr2 65210256 65210576 -185477278 - AluSx SINE Alu -3 309 1 1312 272 109 36 chr2 65210576 65210647 -185477207 - L1MB7 LINE L1 -808 5376 5312 526 136 68 34 chr2 65211327 65211445 -185476409 - L1MB8 LINE L1 -169 6009 5888 671 217 46 7 chr2 65212757 65212909 -185474945 + MER20 DNA MER1_type 1 158 -61 2169 121 0 3 chr2 65212956 65213253 -185474601 + AluSx SINE Alu 1 296 -16 458 274 118 43 chr2 65213503 65213606 -185474248 - MIR SINE MIR 0 262 168 1487 201 4 7 chr2 65213606 65213875 -185473979 - AluJo SINE Alu -19 293 26 458 274 118 43 chr2 65213875 65213957 -185473897 - MIR SINE MIR -94 168 63 257 318 0 0 chr2 65214132 65214198 -185473656 + MER33 DNA MER1_type 1 66 -258 1380 228 13 42 chr2 65214200 65214511 -185473343 + AluJo SINE Alu 1 302 0 2042 106 33 26 chr2 65214517 65214819 -185473035 + AluSg SINE Alu 1 304 -6 2185 127 0 6 chr2 65214819 65215133 -185472721 + AluSx SINE Alu 1 312 0 580 210 94 6 chr2 65215153 65215334 -185472520 + MER33 DNA MER1_type 50 246 -78 2203 98 0 0 chr2 65215361 65215637 -185472217 - AluSx SINE Alu -36 276 1 254 229 0 29 chr2 65215641 65215711 -185472143 + MER33 DNA MER1_type 274 341 -22 282 56 0 0 chr2 65215838 65215874 -185471980 + (TGG)n Simple_repeat Simple_repeat 3 38 0 2205 96 0 3 chr2 65217522 65217839 -185470015 + AluY SINE Alu 1 311 0 1051 217 0 19 chr2 65218904 65219116 -185468738 + AluJo SINE Alu 1 208 -104 1174 209 17 8 chr2 65219951 65220185 -185467669 - MER46A DNA MER2_type 0 236 1 228 152 13 63 chr2 65220246 65220325 -185467529 + (TA)n Simple_repeat Simple_repeat 1 75 0 635 237 7 14 chr2 65220446 65220585 -185467269 - AluJb SINE Alu -168 144 7 219 146 0 0 chr2 65220740 65220781 -185467073 + (GGA)n Simple_repeat Simple_repeat 2 42 0 747 221 155 99 chr2 65220843 65221218 -185466636 + L1M3 LINE L1 16 411 -5973 1444 140 27 122 chr2 65221357 65221685 -185466169 - AluYb8 SINE Alu -13 305 9 3185 192 83 9 chr2 65221689 65222475 -185465379 + L1M3 LINE L1 905 1748 -4636 201 309 89 41 chr2 65222971 65223094 -185464760 + L2 LINE L2 3139 3267 -5 1891 199 84 35 chr2 65223182 65223568 -185464286 + L1M3 LINE L1 1736 2102 -4280 246 32 0 0 chr2 65223568 65223599 -185464255 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1891 199 84 35 chr2 65223599 65223973 -185463881 + L1M3 LINE L1 2102 2624 -3758 * 2511 191 16 29 chr2 65223956 65224168 -185463686 + L1MB2 LINE L1 5584 5797 -374 1655 168 0 8 chr2 65224168 65224436 -185463418 + AluJb SINE Alu 1 266 -46 312 27 0 0 chr2 65224438 65224475 -185463379 + (CA)n Simple_repeat Simple_repeat 1 37 0 2511 191 16 29 chr2 65224475 65224809 -185463045 + L1MB2 LINE L1 5798 6126 -45 1272 238 88 56 chr2 65224877 65225578 -185462276 + L1M3 LINE L1 2696 3419 -2963 1159 208 64 28 chr2 65225592 65225842 -185462012 + AluJb SINE Alu 15 273 -39 2050 116 0 11 chr2 65225871 65226186 -185461668 + AluSx SINE Alu 1 312 0 286 295 104 5 chr2 65226200 65226393 -185461461 + L1M3 LINE L1 3417 3628 -2754 3623 238 58 15 chr2 65226394 65227616 -185460238 + L1M3 LINE L1 4175 5449 -933 * 5618 169 59 49 chr2 65227587 65227742 -185460112 + L1MA9 LINE L1 4099 4251 -2297 1944 116 7 7 chr2 65227742 65228018 -185459836 - AluSg SINE Alu -7 303 28 5618 169 59 49 chr2 65228018 65228628 -185459226 + L1MA9 LINE L1 4251 4854 -1694 1698 158 3 27 chr2 65228628 65228926 -185458928 - AluJb SINE Alu -21 291 1 5618 169 59 49 chr2 65228926 65229091 -185458763 + L1MA9 LINE L1 4854 5016 -1532 1565 182 0 38 chr2 65229091 65229382 -185458472 + AluJo SINE Alu 1 280 -32 5618 169 59 49 chr2 65229382 65229934 -185457920 + L1MA9 LINE L1 5016 5561 -987 225 0 0 0 chr2 65229934 65229959 -185457895 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 5618 169 59 49 chr2 65229959 65230859 -185456995 + L1MA9 LINE L1 5561 6536 -12 2565 168 51 26 chr2 65230880 65231328 -185456526 + L1M3 LINE L1 5431 5897 -519 1079 147 108 97 chr2 65231328 65231669 -185456185 - MER7A DNA MER2_type -3 343 1 2565 168 51 26 chr2 65231669 65231834 -185456020 + L1M3 LINE L1 5897 6057 -359 265 209 75 0 chr2 65231939 65232006 -185455848 + L1MB4 LINE L1 5780 5851 -329 245 254 0 0 chr2 65232007 65232078 -185455776 - L1MB4 LINE L1 -103 6077 6007 * 1369 186 11 72 chr2 65232074 65232198 -185455656 + L1MB4 LINE L1 5853 5983 -197 1376 181 58 14 chr2 65232198 65232475 -185455379 + AluJo SINE Alu 1 289 -23 1369 186 11 72 chr2 65232475 65232699 -185455155 + L1MB4 LINE L1 5983 6180 0 1937 152 3 7 chr2 65232750 65233040 -185454814 + AluSx SINE Alu 1 289 -23 207 0 0 0 chr2 65233052 65233075 -185454779 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 969 127 8 0 chr2 65233075 65233209 -185454645 + AluSg SINE Alu 1 135 -175 478 228 99 6 chr2 65233463 65233625 -185454229 + HAL1b LINE L1 714 890 -458 1678 135 103 0 chr2 65233730 65234007 -185453847 - AluSg SINE Alu 0 305 3 1481 210 0 4 chr2 65234551 65234823 -185453031 + AluJb SINE Alu 1 271 -41 675 168 128 34 chr2 65235121 65235270 -185452584 + AluJo SINE Alu 127 289 -23 25 0 0 0 chr2 65235377 65235402 -185452452 + AT_rich Low_complexity Low_complexity 1 25 0 628 241 90 61 chr2 65235799 65235937 -185451917 - MER58A DNA MER1_type -2202 218 70 2185 107 0 3 chr2 65235937 65236235 -185451619 + AluSc SINE Alu 1 297 -12 628 241 90 61 chr2 65236235 65236308 -185451546 - MER58A DNA MER1_type -2350 70 1 523 216 84 0 chr2 65236742 65236932 -185450922 + L1MC4a LINE L1 5266 5471 -2337 375 290 155 50 chr2 65236983 65237148 -185450706 + L1MC4a LINE L1 5581 5727 -2081 2165 132 0 0 chr2 65237148 65237452 -185450402 + AluSg SINE Alu 1 304 -6 375 290 155 50 chr2 65237452 65237648 -185450206 + L1MC4a LINE L1 5727 5980 -1828 24 0 0 0 chr2 65237764 65237788 -185450066 + AT_rich Low_complexity Low_complexity 1 24 0 241 266 380 9 chr2 65237986 65238099 -185449755 + MIR SINE MIR 106 260 -2 1511 161 93 43 chr2 65238859 65239182 -185448672 + Tigger3(Golem) DNA MER2_type 1 339 -2690 284 216 0 0 chr2 65239169 65239220 -185448634 + Tigger3(Golem) DNA MER2_type 2180 2230 -799 * 2931 149 113 8 chr2 65239220 65239830 -185448024 + Tigger3(Golem) DNA MER2_type 2354 3027 -2 23 0 0 0 chr2 65240001 65240024 -185447830 + AT_rich Low_complexity Low_complexity 1 23 0 1254 208 83 15 chr2 65240237 65240501 -185447353 + AluJo SINE Alu 6 287 -25 476 229 94 0 chr2 65240590 65240839 -185447015 + L1MB7 LINE L1 1250 1548 -4836 738 242 102 29 chr2 65241013 65241465 -185446389 + L1MB7 LINE L1 2320 2767 -3615 512 213 0 0 chr2 65241466 65241560 -185446294 + MER82 DNA MER2_type 1 94 -559 248 255 6 149 chr2 65241624 65241658 -185446196 - MIR SINE MIR -111 151 114 2115 131 3 3 chr2 65241658 65241963 -185445891 + AluSx SINE Alu 1 305 -7 248 255 6 149 chr2 65241963 65242089 -185445765 - MIR SINE MIR -148 114 14 876 271 10 0 chr2 65242153 65242345 -185445509 - MER82 DNA MER2_type -16 637 444 640 213 17 70 chr2 65242376 65242401 -185445453 + L1MB7 LINE L1 2764 2789 -3593 1545 115 171 4 chr2 65242401 65242653 -185445201 - AluSx SINE Alu -8 294 1 640 213 17 70 chr2 65242653 65242857 -185444997 + L1MB7 LINE L1 2789 2981 -3401 * 3096 200 66 36 chr2 65242849 65243272 -185444582 + L1MB7 LINE L1 5530 5939 -481 2584 52 7 0 chr2 65243272 65243577 -185444277 + AluY SINE Alu 1 307 -4 3096 200 66 36 chr2 65243577 65244018 -185443836 + L1MB7 LINE L1 5939 6420 0 1891 148 20 3 chr2 65244420 65244724 -185443130 - AluSx SINE Alu -2 310 2 460 327 134 11 chr2 65244827 65245102 -185442752 + L3 LINE CR1 1081 1389 -188 1654 184 29 10 chr2 65245243 65245553 -185442301 + MLT1A1 LTR MaLR 50 365 0 1659 190 21 0 chr2 65245679 65245963 -185441891 + AluJb SINE Alu 1 290 -22 2099 121 6 10 chr2 65246406 65246719 -185441135 + AluSx SINE Alu 1 312 0 180 0 0 0 chr2 65246989 65247009 -185440845 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1872 132 43 4 chr2 65247019 65247299 -185440555 + AluSx SINE Alu 1 291 -21 216 0 0 0 chr2 65247303 65247327 -185440527 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 441 326 28 44 chr2 65247334 65247515 -185440339 - Charlie8 DNA MER1_type -2128 289 112 258 289 115 0 chr2 65248246 65248350 -185439504 + L2 LINE L2 2020 2135 -1179 771 240 86 30 chr2 65248355 65248622 -185439232 + MLT1H LTR MaLR 9 290 -259 1970 23 0 0 chr2 65248788 65249003 -185438851 + SVA Other Other 1170 1384 -2 23 68 0 0 chr2 65249003 65249047 -185438807 + AT_rich Low_complexity Low_complexity 1 44 0 189 0 0 0 chr2 65249047 65249068 -185438786 + (CA)n Simple_repeat Simple_repeat 2 22 0 335 164 18 146 chr2 65249078 65249122 -185438732 + MLT1H LTR MaLR 454 477 -72 1841 162 10 3 chr2 65249122 65249418 -185438436 - AluJo SINE Alu -14 298 1 335 164 18 146 chr2 65249418 65249483 -185438371 + MLT1H LTR MaLR 477 549 0 523 302 196 47 chr2 65249483 65250204 -185437650 + L2 LINE L2 2132 2959 -355 441 243 203 52 chr2 65250541 65250792 -185437062 + L2 LINE L2 3021 3309 -4 23 54 0 0 chr2 65250975 65251012 -185436842 + AT_rich Low_complexity Low_complexity 1 37 0 2088 101 0 53 chr2 65251204 65251522 -185436332 + AluSg SINE Alu 1 301 -9 1773 154 3 22 chr2 65252169 65252481 -185435373 + AluSx SINE Alu 1 306 -6 549 257 133 89 chr2 65252525 65253182 -185434672 + L1M4 LINE L1 3996 4623 -1523 2478 53 33 3 chr2 65253182 65253481 -185434373 + AluY SINE Alu 1 308 -3 549 257 133 89 chr2 65253481 65253494 -185434360 + L1M4 LINE L1 4623 4634 -1512 2111 124 7 16 chr2 65253494 65253801 -185434053 + AluSx SINE Alu 1 304 -8 549 257 133 89 chr2 65253801 65253942 -185433912 + L1M4 LINE L1 4634 4844 -1302 356 176 22 116 chr2 65253983 65254081 -185433773 + AluJ/FLAM SINE Alu 20 99 -203 463 228 78 126 chr2 65254088 65254291 -185433563 + L1M4 LINE L1 4882 5093 -1075 2196 113 0 3 chr2 65254291 65254592 -185433262 + AluSc SINE Alu 1 300 -9 463 228 78 126 chr2 65254592 65254952 -185432902 + L1M4 LINE L1 5093 5417 -751 1932 145 0 13 chr2 65254961 65255265 -185432589 + AluSx SINE Alu 1 300 -12 309 264 11 11 chr2 65255283 65255374 -185432480 - L1MC4 LINE L1 -1339 6703 6613 191 189 19 0 chr2 65255374 65255427 -185432427 + (TA)n Simple_repeat Simple_repeat 1 54 0 2003 110 53 0 chr2 65255678 65255959 -185431895 + AluSg SINE Alu 1 296 -14 945 166 155 5 chr2 65256187 65256380 -185431474 + AluJb SINE Alu 88 309 -3 2509 27 41 0 chr2 65257338 65257633 -185430221 + AluY SINE Alu 1 307 -4 1662 118 42 11 chr2 65257633 65257894 -185429960 + AluSx SINE Alu 27 297 -15 2403 76 0 32 chr2 65258000 65258315 -185429539 - AluY SINE Alu -6 305 1 1307 177 3 93 chr2 65258427 65258737 -185429117 + AluJo SINE Alu 1 282 -30 242 303 165 0 chr2 65258952 65259061 -185428793 + MIR3 SINE MIR 45 171 -37 22 35 0 0 chr2 65259313 65259342 -185428512 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 65260002 65260023 -185427831 + AT_rich Low_complexity Low_complexity 1 21 0 364 104 0 160 chr2 65260124 65260163 -185427691 - MER50 LTR ERV1 -134 600 556 2384 67 3 19 chr2 65260163 65260475 -185427379 + AluY SINE Alu 1 307 -4 364 104 0 160 chr2 65260475 65260541 -185427313 - MER50 LTR ERV1 -178 556 512 606 276 30 74 chr2 65260814 65261118 -185426736 + MLT1H LTR MaLR 65 328 -221 2327 85 9 29 chr2 65261402 65261718 -185426136 + AluY SINE Alu 1 310 -1 23 0 0 0 chr2 65262632 65262655 -185425199 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr2 65263098 65263121 -185424733 + (TC)n Simple_repeat Simple_repeat 1 23 0 29 47 0 0 chr2 65263136 65263179 -185424675 + AT_rich Low_complexity Low_complexity 1 43 0 2202 104 0 17 chr2 65263179 65263476 -185424378 + AluSq SINE Alu 1 292 -21 1217 182 121 26 chr2 65263560 65263824 -185424030 + AluJo SINE Alu 1 289 -23 1696 231 32 41 chr2 65264083 65264289 -185423565 + MLT1F1 LTR MaLR 100 306 -261 2206 132 0 3 chr2 65264289 65264599 -185423255 + AluSx SINE Alu 1 309 -3 1696 231 32 41 chr2 65264599 65264859 -185422995 + MLT1F1 LTR MaLR 306 562 -5 198 250 42 69 chr2 65264887 65264959 -185422895 + MIR3 SINE MIR 126 195 -13 1978 125 10 10 chr2 65265071 65265374 -185422480 + AluSx SINE Alu 1 303 -9 1838 159 10 0 chr2 65265400 65265690 -185422164 + AluSx SINE Alu 5 297 -15 510 81 0 0 chr2 65265723 65265785 -185422069 + Alu SINE Alu 2 63 -248 2254 118 0 0 chr2 65265889 65266194 -185421660 + AluSx SINE Alu 1 305 -7 25 75 0 0 chr2 65266372 65266425 -185421429 + AT_rich Low_complexity Low_complexity 1 53 0 3495 145 50 0 chr2 65266491 65266993 -185420861 - MER1A DNA MER1_type 0 527 1 517 324 138 52 chr2 65267106 65267575 -185420279 + HAL1 LINE L1 22 554 -1953 1629 188 14 0 chr2 65267575 65267862 -185419992 + AluJo SINE Alu 16 306 -6 517 324 138 52 chr2 65267862 65267984 -185419870 + HAL1 LINE L1 554 664 -1843 2297 109 3 3 chr2 65268363 65268676 -185419178 + AluSp SINE Alu 1 313 0 263 286 50 12 chr2 65268676 65268837 -185419017 + HAL1 LINE L1 882 1048 -1459 372 244 59 22 chr2 65269027 65269063 -185418791 + HAL1 LINE L1 1150 1183 -1324 1722 193 7 0 chr2 65269063 65269368 -185418486 + AluJo SINE Alu 1 307 -5 372 244 59 22 chr2 65269368 65269466 -185418388 + HAL1 LINE L1 1183 1289 -1218 2138 113 10 13 chr2 65269570 65269880 -185417974 + AluSc SINE Alu 1 309 0 729 114 35 9 chr2 65269884 65269998 -185417856 + AluJb SINE Alu 2 118 -194 894 143 0 14 chr2 65269998 65270145 -185417709 + AluSc SINE Alu 164 308 -1 726 124 35 0 chr2 65270153 65270266 -185417588 + AluJb SINE Alu 2 118 -194 923 105 0 40 chr2 65270266 65270418 -185417436 + AluSc SINE Alu 164 309 0 1828 110 45 32 chr2 65270429 65270737 -185417117 + AluSx SINE Alu 1 312 0 862 211 92 40 chr2 65270776 65271035 -185416819 + HAL1 LINE L1 1504 1783 -724 4055 100 86 15 chr2 65271035 65271627 -185416227 - MER51A LTR ERV1 0 634 1 862 211 92 40 chr2 65271627 65271670 -185416184 + HAL1 LINE L1 1783 1822 -685 390 263 218 24 chr2 65271755 65272090 -185415764 + HAL1 LINE L1 1979 2378 -129 21 36 0 0 chr2 65274131 65274159 -185413695 + AT_rich Low_complexity Low_complexity 1 28 0 2164 126 7 0 chr2 65274287 65274596 -185413258 - AluSx SINE Alu -1 311 1 2188 113 7 3 chr2 65274642 65274935 -185412919 - AluSx SINE Alu -18 294 1 242 309 99 52 chr2 65275543 65275744 -185412110 - MIR SINE MIR -14 248 33 768 105 73 32 chr2 65275744 65275868 -185411986 - FLAM_C SINE Alu -4 129 1 242 309 99 52 chr2 65275868 65275899 -185411955 - MIR SINE MIR -229 33 5 236 361 0 0 chr2 65276116 65276188 -185411666 + MIR SINE MIR 61 132 -76 487 183 160 63 chr2 65277600 65277775 -185410079 + LTR50 LTR ERVL 3 194 -601 237 264 250 14 chr2 65277794 65277934 -185409920 + LTR50 LTR ERVL 297 469 -326 216 0 0 0 chr2 65278328 65278352 -185409502 + (CA)n Simple_repeat Simple_repeat 2 25 0 342 291 128 0 chr2 65278383 65278500 -185409354 + HAL1 LINE L1 557 688 -1819 936 194 114 8 chr2 65279053 65279290 -185408564 + L1MB2 LINE L1 4014 4275 -1871 1447 157 0 96 chr2 65279290 65279602 -185408252 + AluJb SINE Alu 21 302 -10 1016 201 64 46 chr2 65279602 65279659 -185408195 + L1MB2 LINE L1 4274 4328 -1818 2009 98 18 11 chr2 65279659 65279944 -185407910 - AluSq SINE Alu -5 308 22 1016 201 64 46 chr2 65279944 65280214 -185407640 + L1MB2 LINE L1 4328 4607 -1539 1344 207 3 48 chr2 65280229 65280538 -185407316 + AluJo SINE Alu 15 309 -3 1000 185 15 15 chr2 65280539 65280734 -185407120 + L1MB2 LINE L1 5494 5688 -483 1203 157 45 27 chr2 65280742 65280965 -185406889 - MER7A DNA MER2_type -121 225 1 633 201 240 6 chr2 65280969 65281148 -185406706 + L1MB2 LINE L1 5908 6128 -43 766 137 0 26 chr2 65281161 65281278 -185406576 + FLAM_C SINE Alu 15 128 -15 1874 115 71 0 chr2 65281393 65281662 -185406192 - AluSg SINE Alu -22 288 1 10867 168 70 48 chr2 65281691 65283595 -185404259 + L1M1 LINE L1 15 1985 -5580 2338 60 35 3 chr2 65283595 65283880 -185403974 - AluY SINE Alu -17 294 1 10867 168 70 48 chr2 65283880 65284432 -185403422 + L1M1 LINE L1 1985 2524 -5041 2288 96 0 7 chr2 65284433 65284734 -185403120 + AluSq SINE Alu 1 299 -14 959 235 126 38 chr2 65284800 65285331 -185402523 + L1MC5 LINE L1 6957 7534 -427 32 0 0 0 chr2 65285568 65285600 -185402254 + AT_rich Low_complexity Low_complexity 1 32 0 976 208 42 60 chr2 65285604 65285718 -185402136 + AluJo SINE Alu 34 149 -163 2349 71 0 0 chr2 65285718 65286031 -185401823 + AluY SINE Alu 1 313 0 976 208 42 60 chr2 65286031 65286180 -185401674 + AluJo SINE Alu 149 293 -19 780 202 126 62 chr2 65286189 65286332 -185401522 + L1ME1 LINE L1 5779 5911 -255 1939 112 6 91 chr2 65286332 65286484 -185401370 + AluSx SINE Alu 1 112 -200 2569 58 0 6 chr2 65286484 65286797 -185401057 + AluY SINE Alu 1 311 0 1939 112 6 91 chr2 65286797 65286974 -185400880 + AluSx SINE Alu 112 302 -10 780 202 126 62 chr2 65286974 65287187 -185400667 + L1ME1 LINE L1 5911 6158 -8 1247 158 65 20 chr2 65287323 65287570 -185400284 + AluJo SINE Alu 39 296 -16 231 88 0 0 chr2 65287572 65287606 -185400248 + (AAATG)n Simple_repeat Simple_repeat 3 36 0 1174 160 22 135 chr2 65287624 65287779 -185400075 + L1MA5 LINE L1 5978 6149 -151 1585 203 0 13 chr2 65287779 65288079 -185399775 - AluJo SINE Alu -16 296 1 1174 160 22 135 chr2 65288079 65288126 -185399728 + L1MA5 LINE L1 6149 6200 -100 1832 114 18 11 chr2 65288126 65288439 -185399415 + AluSq SINE Alu 1 315 0 1174 160 22 135 chr2 65288439 65288596 -185399258 + L1MA5 LINE L1 6200 6298 -2 996 175 120 134 chr2 65288611 65288765 -185399089 + AluJo SINE Alu 1 151 -151 1511 193 0 11 chr2 65288765 65289034 -185398820 + AluJb SINE Alu 22 287 -25 996 175 120 134 chr2 65289034 65289170 -185398684 + AluJo SINE Alu 151 287 -15 431 231 51 58 chr2 65289196 65289352 -185398502 + L1MC5 LINE L1 7721 7875 -86 5011 228 48 24 chr2 65289586 65289904 -185397950 + L1M2c LINE L1 82 391 -6458 2185 122 3 0 chr2 65289904 65290208 -185397646 + AluSx SINE Alu 1 305 -7 5011 228 48 24 chr2 65290208 65291573 -185396281 + L1M2c LINE L1 391 1903 -4946 1879 177 3 16 chr2 65291573 65291889 -185395965 + AluJo SINE Alu 1 312 0 1128 225 22 59 chr2 65291890 65292303 -185395551 + L1M2c LINE L1 2333 2868 -3982 2126 118 3 0 chr2 65292303 65292590 -185395264 + AluSx SINE Alu 1 288 -24 1128 225 22 59 chr2 65292590 65292683 -185395171 + L1M2c LINE L1 2868 2963 -3887 1023 187 56 10 chr2 65292689 65292887 -185394967 + AluSg/x SINE Alu 87 293 -19 4992 191 44 12 chr2 65292887 65294049 -185393805 + L1M2c LINE L1 2959 4157 -2691 1236 104 0 0 chr2 65294049 65294203 -185393651 + AluSg SINE Alu 2 155 -155 378 301 126 62 chr2 65294203 65294755 -185393099 - L2 LINE L2 -433 2881 2218 1591 207 7 3 chr2 65294755 65295064 -185392790 - AluJo SINE Alu -2 310 1 378 301 126 62 chr2 65295064 65295113 -185392741 - L2 LINE L2 -1096 2218 2174 189 0 0 0 chr2 65295962 65295983 -185391871 + (T)n Simple_repeat Simple_repeat 1 21 0 965 107 8 0 chr2 65295983 65296114 -185391740 - AluY SINE Alu -179 132 1 2407 84 0 0 chr2 65297057 65297355 -185390499 + AluY SINE Alu 1 298 -13 2057 110 3 10 chr2 65297574 65297873 -185389981 - AluSg SINE Alu -11 299 3 1784 115 63 28 chr2 65298104 65298391 -185389463 - AluSg SINE Alu -13 297 1 236 250 8 26 chr2 65298828 65299101 -185388753 + CT-rich Low_complexity Low_complexity 1 267 0 1340 198 37 11 chr2 65299105 65299373 -185388481 - AluJb SINE Alu -37 275 1 1923 141 0 23 chr2 65299384 65299547 -185388307 - AluSx SINE Alu -20 292 138 2134 130 0 3 chr2 65299547 65299846 -185388008 - AluSc SINE Alu -11 298 1 1923 141 0 23 chr2 65299846 65299981 -185387873 - AluSx SINE Alu -174 138 1 2157 140 0 0 chr2 65300004 65300304 -185387550 - AluSx SINE Alu -12 300 1 546 229 86 0 chr2 65300508 65300648 -185387206 - L1MB7 LINE L1 -11 6173 6022 2462 74 0 0 chr2 65300677 65300973 -185386881 + AluY SINE Alu 1 296 -15 555 262 93 8 chr2 65300982 65301218 -185386636 - L1MB7 LINE L1 -380 5790 5519 1758 123 42 0 chr2 65301395 65301655 -185386199 - AluSx SINE Alu -15 297 27 * 2290 75 41 0 chr2 65301653 65301947 -185385907 - AluY SINE Alu -5 306 1 352 261 85 69 chr2 65302246 65302434 -185385420 - MLT1H1 LTR MaLR -256 299 109 340 284 9 9 chr2 65302427 65302536 -185385318 - MLT1H LTR MaLR -376 173 65 * 363 104 0 160 chr2 65302809 65302875 -185384979 + MER50 LTR ERV1 512 556 -178 2475 67 0 19 chr2 65302875 65303191 -185384663 - AluY SINE Alu -1 310 1 363 104 0 160 chr2 65303191 65303230 -185384624 + MER50 LTR ERV1 556 600 -134 21 0 0 0 chr2 65303331 65303352 -185384502 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 65304012 65304041 -185383813 + AT_rich Low_complexity Low_complexity 1 29 0 206 303 165 0 chr2 65304293 65304402 -185383452 - MIR3 SINE MIR -37 171 45 804 185 19 12 chr2 65304740 65304902 -185382952 - FRAM SINE Alu -14 162 1 851 207 32 0 chr2 65305238 65305426 -185382428 + AluJb SINE Alu 119 312 0 5908 144 28 31 chr2 65305456 65306493 -185381361 + L1MA5A LINE L1 4729 5772 -525 405 0 0 0 chr2 65306493 65306538 -185381316 + (CA)n Simple_repeat Simple_repeat 2 46 0 5908 144 28 31 chr2 65306538 65307061 -185380793 + L1MA5A LINE L1 5772 6295 -2 2570 173 41 8 chr2 65307099 65307586 -185380268 + L1MC1 LINE L1 5814 6316 -17 1172 180 113 49 chr2 65307594 65307878 -185379976 + AluJo SINE Alu 1 302 0 302 281 70 53 chr2 65307898 65308069 -185379785 + L1MEd LINE L1 1178 1351 -5021 283 288 120 16 chr2 65308069 65308253 -185379601 + L1MEd LINE L1 1272 1474 -4910 1657 129 19 11 chr2 65308265 65308528 -185379326 + LTR9B LTR ERV1 296 560 -84 252 0 0 0 chr2 65308829 65308857 -185378997 + (A)n Simple_repeat Simple_repeat 1 28 0 2456 67 3 0 chr2 65308861 65309158 -185378696 + AluY SINE Alu 1 298 -13 1914 116 46 14 chr2 65309282 65309566 -185378288 + AluSg SINE Alu 1 293 -17 1108 114 19 6 chr2 65309583 65309741 -185378113 + AluSg/x SINE Alu 145 304 -8 3463 217 97 49 chr2 65309799 65310120 -185377734 - Charlie1a DNA MER1_type -1522 1239 935 2169 138 0 0 chr2 65310120 65310418 -185377436 + AluSx SINE Alu 1 298 -14 3463 217 97 49 chr2 65310418 65310577 -185377277 - Charlie1a DNA MER1_type -1826 935 785 2166 120 7 7 chr2 65310577 65310886 -185376968 + AluSx SINE Alu 1 309 -3 3463 217 97 49 chr2 65310886 65311312 -185376542 - Charlie1a DNA MER1_type -1976 785 381 2170 115 7 0 chr2 65311312 65311607 -185376247 - AluSx SINE Alu -3 309 13 3463 217 97 49 chr2 65311607 65311795 -185376059 - Charlie1a DNA MER1_type -2380 381 204 1177 207 93 21 chr2 65311795 65312075 -185375779 + AluJo SINE Alu 1 300 -2 3463 217 97 49 chr2 65312075 65312159 -185375695 - Charlie1a DNA MER1_type -2557 204 1 725 223 116 9 chr2 65312199 65312432 -185375422 + L1MB8 LINE L1 4159 4416 -1730 1997 111 4 11 chr2 65312476 65312746 -185375108 + AluSp SINE Alu 1 268 -45 369 182 30 0 chr2 65312797 65312863 -185374991 + AluS SINE Alu 227 294 -6 1880 237 10 24 chr2 65312866 65313373 -185374481 + L1MB8 LINE L1 4456 4955 -1191 2278 105 3 0 chr2 65313378 65313683 -185374171 + AluSg SINE Alu 1 306 -4 981 194 39 36 chr2 65313694 65313973 -185373881 + L1MB8 LINE L1 5811 6090 -88 345 118 176 0 chr2 65314007 65314075 -185373779 - MADE1 DNA Mariner 0 80 1 623 126 0 0 chr2 65314110 65314197 -185373657 + AluSq/x SINE Alu 40 126 -186 336 290 99 36 chr2 65314243 65314464 -185373390 + L1ME3A LINE L1 4378 4612 -1534 2320 112 0 10 chr2 65314531 65314844 -185373010 + AluSg SINE Alu 1 310 0 2216 112 10 0 chr2 65314998 65315303 -185372551 + AluSp SINE Alu 2 309 -4 2369 46 14 0 chr2 65315488 65315771 -185372083 + AluY SINE Alu 1 287 -24 186 43 0 0 chr2 65315774 65315797 -185372057 + (TA)n Simple_repeat Simple_repeat 1 23 0 478 251 99 114 chr2 65315806 65316383 -185371471 + L1ME3A LINE L1 5603 6170 0 2249 111 0 0 chr2 65317824 65318121 -185369733 + AluSc SINE Alu 1 297 -12 959 142 0 0 chr2 65318173 65318314 -185369540 + AluJb SINE Alu 1 141 -171 25 31 0 0 chr2 65318966 65318998 -185368856 + AT_rich Low_complexity Low_complexity 1 32 0 767 176 136 45 chr2 65319144 65319343 -185368511 + AluJb SINE Alu 86 302 -10 2039 111 0 27 chr2 65319343 65319640 -185368214 + AluSx SINE Alu 1 289 -23 277 303 33 40 chr2 65320008 65320160 -185367694 - MIR SINE MIR 0 262 112 2223 99 0 0 chr2 65320169 65320497 -185367357 + AluSx SINE Alu 12 339 0 4435 180 28 36 chr2 65320497 65321011 -185366843 + L1 LINE L1 3450 3954 -2192 2179 90 47 3 chr2 65321011 65321311 -185366543 + AluSq SINE Alu 1 313 0 4435 180 28 36 chr2 65321311 65321803 -185366051 + L1 LINE L1 3954 4448 -1698 883 143 0 0 chr2 65321809 65321935 -185365919 + AluJb SINE Alu 1 126 -186 196 239 92 46 chr2 65322126 65322235 -185365619 + L2 LINE L2 3138 3251 -21 2281 101 3 0 chr2 65323198 65323496 -185364358 - AluSq SINE Alu -14 299 1 459 253 99 114 chr2 65323689 65324266 -185363588 - L1ME3A LINE L1 0 6170 5603 24 24 0 24 chr2 65324278 65324293 -185363561 + AT_rich Low_complexity Low_complexity 1 15 -26 2286 101 0 0 chr2 65324293 65324580 -185363274 - AluY SINE Alu -20 291 5 24 24 0 24 chr2 65324580 65324606 -185363248 + AT_rich Low_complexity Low_complexity 15 41 0 295 227 128 43 chr2 65324631 65324802 -185363052 - L1ME3A LINE L1 -546 5616 5427 1221 213 88 4 chr2 65324802 65325075 -185362779 - AluJb SINE Alu -16 296 1 295 227 128 43 chr2 65325075 65325088 -185362766 - L1ME3A LINE L1 -735 5427 5417 2097 108 23 20 chr2 65325307 65325613 -185362241 - AluSx SINE Alu -5 307 1 1089 178 33 89 chr2 65325613 65325917 -185361937 + AluJb SINE Alu 24 310 -2 261 250 143 0 chr2 65325994 65326106 -185361748 + L1ME LINE L1 5476 5603 -518 1884 162 0 10 chr2 65326118 65326415 -185361439 + AluJb SINE Alu 1 294 -18 2204 124 0 16 chr2 65326417 65326732 -185361122 + AluSx SINE Alu 1 310 -2 234 158 0 0 chr2 65326898 65326936 -185360918 - Alu SINE Alu -171 128 91 1883 124 51 4 chr2 65327138 65327413 -185360441 - AluSx SINE Alu -24 288 1 226 0 29 29 chr2 65327416 65327451 -185360403 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1940 135 7 0 chr2 65327547 65327836 -185360018 - AluSx SINE Alu -20 292 2 1937 137 6 29 chr2 65327852 65328167 -185359687 - AluSx SINE Alu 0 312 5 1918 139 4 0 chr2 65328172 65328446 -185359408 - AluSx SINE Alu -16 296 22 491 233 25 25 chr2 65328482 65328602 -185359252 + FLAM_C SINE Alu 2 121 -12 575 318 23 5 chr2 65328763 65328983 -185358871 - MIR SINE MIR -32 230 7 917 144 0 0 chr2 65329525 65329657 -185358197 + AluJb SINE Alu 2 133 -179 1642 133 3 92 chr2 65329660 65329976 -185357878 + AluJo SINE Alu 1 288 -24 1847 147 4 0 chr2 65329997 65330262 -185357592 + AluJb SINE Alu 15 280 -32 1470 184 59 4 chr2 65330576 65330847 -185357007 + AluJb SINE Alu 7 292 -20 2396 84 7 0 chr2 65331268 65331566 -185356288 + AluSq SINE Alu 1 300 -13 204 289 0 0 chr2 65331592 65331644 -185356210 + GA-rich Low_complexity Low_complexity 2 53 0 * 206 238 0 0 chr2 65331606 65331648 -185356206 + A-rich Low_complexity Low_complexity 12 53 0 2071 141 0 0 chr2 65331775 65332074 -185355780 + AluSg SINE Alu 1 299 -11 29 0 0 0 chr2 65332166 65332195 -185355659 + AT_rich Low_complexity Low_complexity 1 29 0 296 348 0 0 chr2 65332212 65332304 -185355550 + MIR SINE MIR 23 114 -94 2092 95 42 7 chr2 65332482 65332767 -185355087 + AluSx SINE Alu 1 295 -17 2153 110 0 10 chr2 65332767 65333059 -185354795 + AluY SINE Alu 1 289 -22 2291 161 90 7 chr2 65333137 65333548 -185354306 + Tigger7 DNA MER2_type 1 445 -2042 518 218 20 0 chr2 65333529 65333630 -185354224 + Tigger7 DNA MER2_type 2389 2491 0 * 2213 119 3 0 chr2 65333692 65333994 -185353860 + AluSc SINE Alu 1 303 -6 2186 115 0 7 chr2 65334098 65334402 -185353452 + AluSq SINE Alu 1 302 -11 788 163 0 23 chr2 65334517 65334646 -185353208 - FLAM_A SINE Alu -7 126 1 487 266 90 11 chr2 65334720 65334897 -185352957 + L1ME LINE L1 5548 5738 -383 23 0 0 0 chr2 65334898 65334921 -185352933 + AT_rich Low_complexity Low_complexity 1 23 0 2058 140 0 7 chr2 65334947 65335254 -185352600 + AluSg SINE Alu 1 305 -5 2089 141 0 0 chr2 65335256 65335555 -185352299 + AluSx SINE Alu 1 299 -13 1842 161 0 7 chr2 65335569 65335868 -185351986 + AluSx SINE Alu 3 299 -13 752 254 6 12 chr2 65335871 65336036 -185351818 + AluJo/FRAM SINE Alu 136 299 -13 696 162 59 15 chr2 65336199 65336335 -185351519 + FRAM SINE Alu 29 170 -6 2066 138 0 0 chr2 65336541 65336838 -185351016 + AluSq SINE Alu 1 297 -16 370 267 118 43 chr2 65336851 65337038 -185350816 + MIR SINE MIR 48 248 -14 1624 161 0 0 chr2 65337058 65337313 -185350541 + AluSx SINE Alu 33 287 -25 812 39 0 10 chr2 65337628 65337730 -185350124 + AluSg/x SINE Alu 205 305 -7 769 176 8 0 chr2 65338551 65338682 -185349172 + AluJo/FLAM SINE Alu 2 133 -179 2464 84 0 0 chr2 65338685 65338995 -185348859 + AluY SINE Alu 1 310 -1 1538 106 76 60 chr2 65339008 65339132 -185348722 + L1MA5A LINE L1 5986 6106 -191 2009 148 0 0 chr2 65339132 65339422 -185348432 + AluSq SINE Alu 1 290 -23 1538 106 76 60 chr2 65339422 65339599 -185348255 + L1MA5A LINE L1 6106 6292 -5 1880 142 35 0 chr2 65339619 65339908 -185347946 + AluSx SINE Alu 1 299 -13 2079 115 14 3 chr2 65340013 65340309 -185347545 + AluSg SINE Alu 1 299 -11 593 187 0 0 chr2 65340329 65340436 -185347418 - FLAM_A SINE Alu -35 107 1 2219 92 0 10 chr2 65340601 65340894 -185346960 - AluSg SINE Alu -6 304 15 2246 87 11 0 chr2 65341184 65341470 -185346384 - AluSp SINE Alu -24 289 1 2239 102 7 0 chr2 65341914 65342208 -185345646 + AluSq SINE Alu 1 296 -17 29 108 0 0 chr2 65343451 65343571 -185344283 + GC_rich Low_complexity Low_complexity 1 120 0 28 0 0 0 chr2 65343767 65343795 -185344059 + GC_rich Low_complexity Low_complexity 1 28 0 1574 102 9 5 chr2 65343896 65344143 -185343711 + AluSq SINE Alu 68 315 0 835 155 45 0 chr2 65344145 65344300 -185343554 + L1MA5 LINE L1 6137 6298 -2 870 179 120 134 chr2 65344315 65344469 -185343385 + AluJo SINE Alu 1 151 -151 1528 193 0 11 chr2 65344469 65344738 -185343116 + AluJb SINE Alu 22 287 -25 870 179 120 134 chr2 65344738 65344874 -185342980 + AluJo SINE Alu 151 287 -15 422 231 51 58 chr2 65344900 65345056 -185342798 + L1MC5 LINE L1 7721 7875 -86 5090 222 50 21 chr2 65345290 65345608 -185342246 + L1M2c LINE L1 799 1106 -6460 2243 121 0 0 chr2 65345608 65345913 -185341941 + AluSx SINE Alu 1 305 -7 5090 222 50 21 chr2 65345913 65347278 -185340576 + L1M2c LINE L1 1106 2620 -4946 1848 180 3 16 chr2 65347278 65347589 -185340265 + AluJo SINE Alu 1 307 -5 1144 210 27 42 chr2 65347590 65348003 -185339851 + L1M2c LINE L1 2727 3145 -4422 2146 118 3 0 chr2 65348003 65348290 -185339564 + AluSx SINE Alu 1 288 -24 1144 210 27 42 chr2 65348290 65348383 -185339471 + L1M2c LINE L1 3145 3680 -3887 1039 187 56 10 chr2 65348389 65348587 -185339267 + AluSg/x SINE Alu 85 291 -19 9435 182 37 27 chr2 65348587 65349749 -185338105 + L1M2c LINE L1 3676 4825 -2740 2193 99 0 0 chr2 65349749 65350074 -185337780 + AluY SINE Alu 2 326 0 9435 182 37 27 chr2 65350074 65350586 -185337268 + L1M2c LINE L1 4825 5330 -2235 2224 90 43 3 chr2 65350586 65350887 -185336967 + AluSq SINE Alu 1 313 0 9435 182 37 27 chr2 65350887 65351380 -185336474 + L1M2c LINE L1 5330 5867 -1698 883 143 0 0 chr2 65351386 65351512 -185336342 + AluJb SINE Alu 1 126 -186 196 239 92 46 chr2 65351703 65351812 -185336042 + L2 LINE L2 3138 3251 -21 2218 101 7 3 chr2 65352775 65353073 -185334781 - AluSq SINE Alu -14 299 1 845 103 0 44 chr2 65353073 65353209 -185334645 + Tigger5 DNA MER2_type 2108 2237 -86 2149 123 3 3 chr2 65353209 65353517 -185334337 - AluSq SINE Alu -5 308 1 180 0 0 0 chr2 65353808 65353828 -185334026 + (GA)n Simple_repeat Simple_repeat 2 21 0 231 381 0 0 chr2 65354118 65354286 -185333568 + C-rich Low_complexity Low_complexity 1 168 0 1586 157 52 17 chr2 65355409 65355696 -185332158 - AluJo SINE Alu -9 303 7 2161 95 27 0 chr2 65355854 65356150 -185331704 + AluSp SINE Alu 1 304 -9 2446 87 0 0 chr2 65356150 65356449 -185331405 + AluY SINE Alu 1 299 -12 1559 212 7 0 chr2 65356453 65356745 -185331109 + AluJo SINE Alu 3 296 -16 2101 98 7 20 chr2 65356958 65357254 -185330600 + AluSq SINE Alu 1 292 -21 1774 131 28 7 chr2 65357353 65357488 -185330366 + AluSx SINE Alu 1 132 -180 2119 123 3 0 chr2 65357488 65357781 -185330073 + AluSg SINE Alu 1 294 -16 1774 131 28 7 chr2 65357781 65357927 -185329927 + AluSx SINE Alu 132 288 -24 2191 83 23 3 chr2 65358006 65358307 -185329547 - AluSp SINE Alu -6 307 1 1959 150 7 10 chr2 65358482 65358789 -185329065 - AluSx SINE Alu -6 306 1 595 156 73 0 chr2 65358793 65358902 -185328952 - FLAM_C SINE Alu -12 121 5 572 191 20 41 chr2 65358903 65359050 -185328804 - AluJo/FRAM SINE Alu -33 279 136 384 200 0 0 chr2 65359050 65359115 -185328739 - FRAM/FAM SINE Alu -100 66 2 233 207 197 78 chr2 65359199 65359338 -185328516 - HAL1 LINE L1 -1231 1276 1155 2316 65 17 3 chr2 65359338 65359631 -185328223 - AluY SINE Alu -11 300 4 233 207 197 78 chr2 65359631 65359800 -185328054 - HAL1 LINE L1 -1352 1155 931 247 200 22 0 chr2 65359824 65359869 -185327985 - HAL1 LINE L1 -1625 882 837 1712 176 11 4 chr2 65359904 65360182 -185327672 + AluSx SINE Alu 1 280 -32 1640 169 29 4 chr2 65360228 65360501 -185327353 - AluSx SINE Alu -30 282 3 619 215 8 0 chr2 65361264 65361385 -185326469 - FLAM_C SINE Alu -11 122 1 2075 127 33 3 chr2 65361435 65361735 -185326119 - AluSx SINE Alu -3 309 1 1881 123 9 66 chr2 65361735 65361908 -185325946 - AluSx SINE Alu -12 300 152 2564 51 0 0 chr2 65361908 65362201 -185325653 - AluY SINE Alu -17 294 2 1881 123 9 66 chr2 65362201 65362345 -185325509 - AluSx SINE Alu -160 152 1 771 189 7 7 chr2 65362380 65362528 -185325326 + AluSg/x SINE Alu 138 285 -25 22 0 0 0 chr2 65363257 65363279 -185324575 + AT_rich Low_complexity Low_complexity 1 22 0 1244 201 74 21 chr2 65363488 65363771 -185324083 - AluJo SINE Alu -14 298 1 992 176 0 0 chr2 65363871 65364036 -185323818 - AluSg/x SINE Alu -13 297 133 1894 139 24 0 chr2 65364037 65364332 -185323522 - AluSx SINE Alu -10 302 1 216 0 0 0 chr2 65364569 65364593 -185323261 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 2175 110 3 7 chr2 65364618 65364919 -185322935 + AluSx SINE Alu 1 300 -12 1154 129 0 0 chr2 65364931 65365094 -185322760 + AluSg/x SINE Alu 137 299 -13 264 132 0 0 chr2 65365127 65365195 -185322659 + Alu SINE Alu 244 311 0 2183 90 10 55 chr2 65365426 65365738 -185322116 + AluSx SINE Alu 1 298 -14 1211 237 14 14 chr2 65365776 65366063 -185321791 + AluJo SINE Alu 7 293 -19 1812 132 0 66 chr2 65366074 65366377 -185321477 + AluSx SINE Alu 1 283 -29 851 136 17 0 chr2 65366560 65366678 -185321176 + AluSq/x SINE Alu 1 120 -192 779 206 45 89 chr2 65367431 65367494 -185320360 + MER46A DNA MER2_type 1 65 -2666 2067 114 0 14 chr2 65367494 65367783 -185320071 - AluSq SINE Alu -28 285 1 779 206 45 89 chr2 65367783 65367834 -185320020 + MER46A DNA MER2_type 65 117 -2614 1960 136 41 0 chr2 65367834 65368129 -185319725 + AluSp SINE Alu 1 307 -6 779 206 45 89 chr2 65368129 65368260 -185319594 + MER46A DNA MER2_type 117 236 0 1805 141 20 17 chr2 65368476 65368774 -185319080 + AluSx SINE Alu 1 299 -13 1774 168 7 7 chr2 65369134 65369438 -185318416 + AluJo SINE Alu 1 304 -8 2148 107 0 10 chr2 65369616 65369905 -185317949 - AluSp SINE Alu -27 286 1 1166 188 82 20 chr2 65369922 65370177 -185317677 - AluJo SINE Alu -41 271 1 2155 113 3 34 chr2 65370226 65370546 -185317308 - AluSx SINE Alu -1 311 2 456 241 70 19 chr2 65371081 65371239 -185316615 + L1ME LINE L1 4549 4714 -1432 1414 127 180 0 chr2 65371240 65371484 -185316370 + AluSx SINE Alu 2 289 -13 249 196 18 0 chr2 65371487 65371543 -185316311 + L1ME LINE L1 4948 5004 -1142 942 140 29 41 chr2 65371549 65371720 -185316134 - AluJb SINE Alu -24 288 120 344 158 35 0 chr2 65371720 65371777 -185316077 - AluS SINE Alu -242 59 1 846 214 76 95 chr2 65371779 65371842 -185316012 + L1ME LINE L1 4999 5062 -1100 1508 138 153 8 chr2 65371842 65372103 -185315751 - AluSg1 SINE Alu -10 299 1 846 214 76 95 chr2 65372103 65372378 -185315476 + L1ME LINE L1 5062 5341 -821 2024 116 0 23 chr2 65372378 65372679 -185315175 + AluSg SINE Alu 1 294 -16 846 214 76 95 chr2 65372679 65372789 -185315065 + L1ME LINE L1 5341 5452 -710 2363 100 0 7 chr2 65372789 65373098 -185314756 + AluSg SINE Alu 1 307 -3 846 214 76 95 chr2 65373098 65373271 -185314583 + L1ME LINE L1 5452 5613 -549 1808 152 27 10 chr2 65373271 65373567 -185314287 + AluSx SINE Alu 1 301 -11 846 214 76 95 chr2 65373567 65373595 -185314259 + L1ME LINE L1 5613 5640 -522 252 254 0 28 chr2 65373662 65373733 -185314121 + L1ME1 LINE L1 6054 6122 -44 2185 82 0 27 chr2 65374280 65374416 -185313438 + AluY SINE Alu 1 139 -172 324 0 0 0 chr2 65374416 65374452 -185313402 + (CA)n Simple_repeat Simple_repeat 1 36 0 2185 82 0 27 chr2 65374452 65374608 -185313246 + AluY SINE Alu 139 285 -26 1709 129 59 18 chr2 65376098 65376384 -185311470 + AluSq SINE Alu 3 300 -13 511 132 0 55 chr2 65376415 65376506 -185311348 + L1MA3 LINE L1 6215 6300 -5 1341 157 18 5 chr2 65376556 65376773 -185311081 - AluSx SINE Alu -90 222 3 2138 130 0 0 chr2 65376777 65377077 -185310777 - AluSx SINE Alu -12 300 1 2116 123 3 7 chr2 65377192 65377493 -185310361 - AluSp SINE Alu -13 300 1 741 172 0 0 chr2 65378223 65378345 -185309509 - AluSc SINE Alu -16 293 172 1941 105 53 36 chr2 65378350 65378654 -185309200 - AluSp SINE Alu -4 309 1 2094 117 7 3 chr2 65378654 65378944 -185308910 - AluSg1 SINE Alu -18 291 1 1721 178 23 13 chr2 65378945 65379254 -185308600 - AluJo SINE Alu 0 312 1 1834 129 6 65 chr2 65379507 65379832 -185308022 - AluSg SINE Alu -4 306 1 1202 119 8 142 chr2 65380210 65380470 -185307384 + L1PB2 LINE L1 5927 6151 0 2042 107 30 17 chr2 65381378 65381545 -185306309 - AluSx SINE Alu -10 302 128 2207 64 46 4 chr2 65381545 65381825 -185306029 - AluY SINE Alu -19 292 1 2042 107 30 17 chr2 65381825 65381955 -185305899 - AluSx SINE Alu -184 128 1 949 142 0 0 chr2 65381955 65382089 -185305765 - AluSp SINE Alu -179 134 1 1056 191 0 21 chr2 65382325 65382513 -185305341 - AluJo SINE Alu -59 253 70 889 164 46 0 chr2 65383095 65383247 -185304607 - AluSg/x SINE Alu -19 293 135 1957 80 4 8 chr2 65383373 65383623 -185304231 - AluY SINE Alu -19 292 44 422 287 66 0 chr2 65383717 65383839 -185304015 - FLAM_A SINE Alu -11 131 2 857 144 0 0 chr2 65383887 65384019 -185303835 - AluSp/q SINE Alu -8 305 174 501 79 0 0 chr2 65384019 65384082 -185303772 - AluS SINE Alu -243 70 8 2247 94 0 3 chr2 65385729 65386027 -185301827 + AluY SINE Alu 1 297 -14 2262 108 3 0 chr2 65386041 65386337 -185301517 + AluSp SINE Alu 1 297 -16 2219 95 3 3 chr2 65386554 65386848 -185301006 - AluY SINE Alu -17 294 1 2341 88 0 0 chr2 65386888 65387182 -185300672 - AluSc SINE Alu -15 294 1 2215 128 0 0 chr2 65387186 65387492 -185300362 - AluSx SINE Alu -6 306 1 1713 167 27 10 chr2 65387868 65388161 -185299693 + AluSx SINE Alu 3 300 -12 1888 101 40 14 chr2 65388172 65388450 -185299404 + AluSg SINE Alu 1 285 -25 345 24 0 0 chr2 65388450 65388492 -185299362 + (CA)n Simple_repeat Simple_repeat 2 43 0 180 0 0 0 chr2 65388494 65388514 -185299340 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1576 181 23 33 chr2 65388609 65388913 -185298941 + AluJb SINE Alu 1 301 -11 426 293 0 23 chr2 65390146 65390279 -185297575 + AluJo SINE Alu 1 130 -182 973 198 17 0 chr2 65390335 65390507 -185297347 + AluJo SINE Alu 120 294 -18 303 300 83 8 chr2 65390595 65390715 -185297139 - MER5A DNA MER1_type -57 132 4 1671 200 35 25 chr2 65391355 65391750 -185296104 + L1MB5 LINE L1 5722 6120 -54 273 155 0 0 chr2 65391761 65391819 -185296035 + (TA)n Simple_repeat Simple_repeat 1 58 0 1707 155 4 7 chr2 65391837 65392108 -185295746 - AluSx SINE Alu -19 293 24 26 50 0 0 chr2 65392204 65392244 -185295610 + AT_rich Low_complexity Low_complexity 1 40 0 1605 184 27 7 chr2 65392663 65392957 -185294897 - AluJo SINE Alu -12 300 1 1363 229 10 14 chr2 65393200 65393497 -185294357 - AluJo SINE Alu -16 296 1 2163 100 17 3 chr2 65394208 65394499 -185293355 - AluSg SINE Alu -15 295 1 24 0 0 0 chr2 65394793 65394817 -185293037 + AT_rich Low_complexity Low_complexity 1 24 0 1304 123 26 0 chr2 65395099 65395294 -185292560 - AluSg/x SINE Alu -26 284 85 433 167 167 0 chr2 65395988 65396072 -185291782 + AluJ/FLAM SINE Alu 1 98 -214 805 239 6 0 chr2 65396255 65396414 -185291440 + AluSg/x SINE Alu 135 294 -16 558 141 0 22 chr2 65397195 65397287 -185290567 + AluSx SINE Alu 7 96 -216 2321 103 0 0 chr2 65397287 65397587 -185290267 + AluSg SINE Alu 1 300 -10 1513 128 0 0 chr2 65397586 65397805 -185290049 + AluSx SINE Alu 82 300 -12 * 2229 117 7 3 chr2 65398428 65398736 -185289118 + AluSx SINE Alu 1 309 -3 2072 103 21 10 chr2 65399456 65399747 -185288107 + AluSq SINE Alu 1 294 -19 204 179 0 0 chr2 65399799 65399838 -185288016 + A-rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr2 65399959 65399984 -185287870 + AT_rich Low_complexity Low_complexity 1 25 0 2271 72 14 3 chr2 65399984 65400274 -185287580 + AluY SINE Alu 4 296 -15 902 173 12 6 chr2 65400274 65400436 -185287418 - FRAM SINE Alu -14 162 1 848 195 32 11 chr2 65400775 65400965 -185286889 + AluJb SINE Alu 119 312 0 5898 142 29 31 chr2 65400994 65402031 -185285823 + L1MA5A LINE L1 4729 5775 -522 333 0 0 0 chr2 65402031 65402068 -185285786 + (CA)n Simple_repeat Simple_repeat 2 38 0 5898 142 29 31 chr2 65402068 65402589 -185285265 + L1MA5A LINE L1 5775 6295 -2 2579 172 41 8 chr2 65402625 65403113 -185284741 + L1MC1 LINE L1 5813 6316 -17 1172 180 113 49 chr2 65403121 65403405 -185284449 + AluJo SINE Alu 1 302 0 398 269 170 23 chr2 65403419 65403772 -185284082 + L1MDa LINE L1 1320 1724 -4816 1657 129 19 11 chr2 65403792 65404055 -185283799 + LTR9B LTR ERV1 296 560 -84 243 0 0 0 chr2 65404355 65404382 -185283472 + (A)n Simple_repeat Simple_repeat 1 27 0 2361 84 0 0 chr2 65404386 65404682 -185283172 + AluY SINE Alu 1 296 -15 254 382 16 21 chr2 65404697 65404883 -185282971 + L2 LINE L2 2490 2674 -640 937 164 0 0 chr2 65404909 65405055 -185282799 - AluJb SINE Alu -30 282 137 221 280 104 66 chr2 65405483 65405724 -185282130 - L2 LINE L2 -275 2997 2736 2166 111 10 3 chr2 65405725 65406032 -185281822 - AluSc SINE Alu 0 309 1 1811 150 14 14 chr2 65406039 65406325 -185281529 - AluJo SINE Alu -24 288 3 2406 82 3 0 chr2 65406619 65406922 -185280932 - AluY SINE Alu -7 304 1 2386 98 7 0 chr2 65406933 65407239 -185280615 - AluSp SINE Alu -5 308 1 356 330 8 0 chr2 65407265 65407383 -185280471 + L2 LINE L2 3193 3311 -2 1694 193 0 46 chr2 65407440 65407767 -185280087 + AluJb SINE Alu 1 312 0 661 122 0 0 chr2 65407770 65407860 -185279994 + AluS SINE Alu 2 91 -221 1527 160 4 16 chr2 65407861 65407952 -185279902 + AluSx SINE Alu 46 137 -175 2135 117 7 7 chr2 65407952 65408252 -185279602 + AluSx SINE Alu 1 300 -12 1527 160 4 16 chr2 65408252 65408410 -185279444 + AluSx SINE Alu 137 292 -20 21 82 0 0 chr2 65408507 65408556 -185279298 + AT_rich Low_complexity Low_complexity 1 49 0 180 275 29 14 chr2 65408645 65408714 -185279140 + L2 LINE L2 3242 3311 -2 210 275 87 0 chr2 65408918 65408987 -185278867 - MIR3 SINE MIR -132 76 2 2190 73 30 23 chr2 65410835 65411135 -185276719 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 65411392 65411431 -185276423 + AT_rich Low_complexity Low_complexity 1 39 0 589 175 0 0 chr2 65411478 65411575 -185276279 + AluJ/FLAM SINE Alu 3 99 -213 1560 154 0 4 chr2 65411590 65411830 -185276024 + AluJb SINE Alu 73 311 -1 2234 97 0 47 chr2 65411836 65411982 -185275872 + AluSx SINE Alu 1 152 -160 2232 89 13 3 chr2 65411982 65412286 -185275568 + AluY SINE Alu 1 307 -4 2234 97 0 47 chr2 65412286 65412460 -185275394 + AluSx SINE Alu 152 306 -6 21 36 0 0 chr2 65412492 65412520 -185275334 + AT_rich Low_complexity Low_complexity 1 28 0 2154 80 20 3 chr2 65412579 65412880 -185274974 - AluY SINE Alu -5 306 1 180 0 0 0 chr2 65412978 65412998 -185274856 + (TC)n Simple_repeat Simple_repeat 2 21 0 2066 151 0 19 chr2 65413289 65413606 -185274248 + AluSx SINE Alu 1 311 -1 268 106 21 43 chr2 65413726 65413773 -185274081 - Tigger5 DNA MER2_type 0 2323 2278 1700 100 4 4 chr2 65413793 65414024 -185273830 - AluSg/x SINE Alu -15 297 67 2229 123 0 0 chr2 65414288 65414589 -185273265 - AluSc SINE Alu -8 301 1 2061 85 25 28 chr2 65414598 65414904 -185272950 - AluSq SINE Alu 0 309 5 446 191 101 0 chr2 65414928 65415017 -185272837 - FLAM_A SINE Alu -18 124 27 529 196 0 0 chr2 65415188 65415285 -185272569 + FLAM_C SINE Alu 21 117 -26 1016 188 6 6 chr2 65415292 65415473 -185272381 - AluJb SINE Alu -2 310 130 504 100 62 0 chr2 65415578 65415658 -185272196 - AluJ/FLAM SINE Alu -221 91 7 257 253 0 10 chr2 65415689 65415788 -185272066 - L1MC4 LINE L1 -1337 6705 6608 2210 110 7 3 chr2 65415859 65416158 -185271696 + AluSx SINE Alu 1 300 -12 1861 139 0 36 chr2 65416178 65416316 -185271538 + AluJb SINE Alu 1 143 -169 2186 137 0 13 chr2 65416316 65416650 -185271204 + AluSx SINE Alu 1 312 0 1861 139 0 36 chr2 65416650 65416812 -185271042 + AluJb SINE Alu 143 290 -22 2208 113 7 0 chr2 65418166 65418459 -185269395 - AluSx SINE Alu -17 295 1 1880 98 26 65 chr2 65418748 65419054 -185268800 + AluSq SINE Alu 1 294 -19 846 57 228 0 chr2 65419071 65419194 -185268660 - AluY SINE Alu -4 307 157 5587 118 8 21 chr2 65419294 65420299 -185267555 - L1P3 LINE L1 -4531 1930 939 2199 138 0 0 chr2 65420301 65420606 -185267248 - AluSx SINE Alu -7 305 1 257 219 16 0 chr2 65420643 65420707 -185267147 - AluSp/q SINE Alu -7 296 232 2414 58 24 0 chr2 65420722 65421015 -185266839 - AluY SINE Alu -10 301 2 22 35 0 0 chr2 65421217 65421246 -185266608 + AT_rich Low_complexity Low_complexity 1 29 0 769 201 29 35 chr2 65421288 65421462 -185266392 - AluJo SINE Alu -11 301 129 414 99 0 37 chr2 65421462 65421543 -185266311 + (TTC)n Simple_repeat Simple_repeat 2 79 0 689 197 7 22 chr2 65421563 65421700 -185266154 - AluJo SINE Alu -166 146 12 392 241 121 35 chr2 65421712 65421886 -185265968 + L1MC4a LINE L1 5637 5825 -1983 2415 47 40 3 chr2 65421907 65422207 -185265647 + AluY SINE Alu 1 311 0 293 152 0 0 chr2 65422218 65422264 -185265590 + L1MC1 LINE L1 5199 5244 -902 5616 152 32 46 chr2 65422548 65422569 -185265285 + L1MC1 LINE L1 5222 5242 -1091 189 0 0 0 chr2 65422569 65422590 -185265264 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 5616 152 32 46 chr2 65422590 65422754 -185265100 + L1MC1 LINE L1 5242 5407 -926 1819 84 128 0 chr2 65422754 65423043 -185264811 + AluSg SINE Alu 1 321 0 5616 152 32 46 chr2 65423043 65423277 -185264577 + L1MC1 LINE L1 5407 5643 -690 180 77 0 0 chr2 65423277 65423303 -185264551 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 5616 152 32 46 chr2 65423303 65423764 -185264090 + L1MC1 LINE L1 5643 6081 -252 2208 125 0 13 chr2 65423764 65424075 -185263779 - AluSx SINE Alu -5 307 1 5616 152 32 46 chr2 65424075 65424318 -185263536 + L1MC1 LINE L1 6081 6326 -7 2089 137 13 0 chr2 65424318 65424618 -185263236 + AluSx SINE Alu 1 304 -8 1566 104 0 5 chr2 65424618 65424819 -185263035 + AluSg/x SINE Alu 82 282 -30 261 0 0 0 chr2 65424823 65424852 -185263002 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 1323 124 20 15 chr2 65424952 65425154 -185262700 - AluJb SINE Alu -25 287 85 23 68 0 0 chr2 65425154 65425198 -185262656 + AT_rich Low_complexity Low_complexity 1 44 0 2471 56 0 3 chr2 65425542 65425847 -185262007 - AluY SINE Alu -7 304 1 1748 127 27 33 chr2 65425873 65426172 -185261682 - AluJo SINE Alu -12 300 4 1051 139 23 5 chr2 65426686 65426952 -185260902 - AluJb SINE Alu 0 312 2 2184 102 3 53 chr2 65427016 65427196 -185260658 - AluSq SINE Alu -6 307 148 222 37 0 0 chr2 65427196 65427223 -185260631 + (TA)n Simple_repeat Simple_repeat 2 28 0 2184 102 3 53 chr2 65427223 65427365 -185260489 - AluSq SINE Alu -165 148 1 2034 125 0 4 chr2 65427434 65427782 -185260072 - AluSc SINE Alu 0 347 1 1881 137 0 54 chr2 65427784 65428097 -185259757 - AluSx SINE Alu -16 296 1 2479 77 0 0 chr2 65428110 65428410 -185259444 - AluSg SINE Alu -10 300 1 615 128 0 154 chr2 65428534 65428690 -185259164 - FLAM_C SINE Alu -10 133 2 1870 163 10 3 chr2 65428727 65429022 -185258832 + AluJb SINE Alu 2 298 -14 22 0 0 0 chr2 65429082 65429104 -185258750 + AT_rich Low_complexity Low_complexity 1 22 0 295 283 81 0 chr2 65429204 65429303 -185258551 + MIR3 SINE MIR 68 174 -34 510 196 176 20 chr2 65429699 65429847 -185258007 - MER5A DNA MER1_type -6 183 13 638 242 90 22 chr2 65430254 65430477 -185257377 + L1ME LINE L1 5325 5562 -608 2674 45 0 10 chr2 65430487 65430799 -185257055 - AluY SINE Alu -1 310 2 216 0 0 0 chr2 65430799 65430823 -185257031 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 1670 140 0 113 chr2 65430824 65430983 -185256871 - AluJb SINE Alu -20 292 187 2190 98 6 47 chr2 65430983 65431301 -185256553 - AluSp SINE Alu -8 305 1 1670 140 0 113 chr2 65431301 65431470 -185256384 - AluJb SINE Alu -125 187 1 380 148 0 0 chr2 65431775 65431836 -185256018 + Alu SINE Alu 242 302 0 866 69 0 0 chr2 65432083 65432184 -185255670 - AluY SINE Alu -210 101 1 209 193 105 0 chr2 65432191 65432248 -185255606 - MIR SINE MIR -54 208 146 228 186 23 0 chr2 65432251 65432294 -185255560 + L2 LINE L2 3264 3307 -6 254 252 122 9 chr2 65432298 65432405 -185255449 - MIR SINE MIR -115 147 29 1189 116 0 33 chr2 65432464 65432645 -185255209 - AluJo/FRAM SINE Alu -4 308 134 2340 109 3 0 chr2 65432645 65432947 -185254907 - AluSx SINE Alu -9 303 1 1830 116 8 8 chr2 65433124 65433383 -185254471 - AluSx SINE Alu -53 259 1 2284 122 0 0 chr2 65433385 65433696 -185254158 - AluSx SINE Alu -1 311 1 2138 119 0 0 chr2 65433703 65434016 -185253838 - AluSq SINE Alu 0 313 1 308 274 178 0 chr2 65434127 65434273 -185253581 + L2 LINE L2 3142 3313 0 1500 135 6 75 chr2 65434318 65434462 -185253392 + AluY SINE Alu 1 153 -158 360 64 0 0 chr2 65434462 65434509 -185253345 + (CA)n Simple_repeat Simple_repeat 2 48 0 1500 135 6 75 chr2 65434509 65434698 -185253156 + AluY SINE Alu 153 311 0 2199 101 31 0 chr2 65435006 65435294 -185252560 - AluSg SINE Alu -13 297 1 2069 101 20 20 chr2 65435463 65435769 -185252085 + AluY SINE Alu 1 306 -5 1375 182 37 30 chr2 65436420 65436717 -185251137 + AluJo SINE Alu 11 309 -3 1457 204 10 13 chr2 65437790 65438103 -185249751 - AluJo SINE Alu 0 312 1 1474 201 48 4 chr2 65438124 65438397 -185249457 - AluJo SINE Alu -22 290 6 22 0 0 0 chr2 65439500 65439522 -185248332 + AT_rich Low_complexity Low_complexity 1 22 0 1466 189 52 7 chr2 65440689 65440959 -185246895 + AluJo SINE Alu 1 282 -30 2324 103 0 3 chr2 65442752 65443053 -185244801 - AluSx SINE Alu -12 300 1 1385 201 0 60 chr2 65443233 65443551 -185244303 + AluJo SINE Alu 1 299 -13 2115 110 0 3 chr2 65443966 65444248 -185243606 - AluSg SINE Alu -6 304 24 1997 108 3 67 chr2 65444398 65444714 -185243140 + AluSg SINE Alu 1 296 -14 435 19 0 0 chr2 65444775 65444827 -185243027 + (TA)n Simple_repeat Simple_repeat 1 52 0 231 172 0 125 chr2 65444976 65445040 -185242814 + AluSp SINE Alu 109 164 -139 974 158 126 11 chr2 65445040 65445223 -185242631 + AluJb SINE Alu 70 273 -39 2257 100 0 26 chr2 65445425 65445735 -185242119 + AluSg SINE Alu 5 306 -4 25 0 0 0 chr2 65446877 65446902 -185240952 + AT_rich Low_complexity Low_complexity 1 25 0 202 222 0 44 chr2 65446955 65447000 -185240854 - L2 LINE L2 -20 3252 3210 2181 61 7 0 chr2 65448157 65448470 -185239384 - AluY SINE Alu 0 315 1 1109 173 10 90 chr2 65448470 65448591 -185239263 - AluJo SINE Alu -14 298 169 1885 134 24 10 chr2 65448591 65448889 -185238965 - AluSx SINE Alu -10 302 1 1109 173 10 90 chr2 65448889 65449056 -185238798 - AluJo SINE Alu -143 169 33 1377 218 7 7 chr2 65449134 65449437 -185238417 - AluJo SINE Alu -9 303 1 1841 134 11 0 chr2 65449540 65449816 -185238038 + AluSq SINE Alu 1 279 -34 34 0 0 0 chr2 65449816 65449850 -185238004 + AT_rich Low_complexity Low_complexity 1 34 0 2213 80 10 6 chr2 65450027 65450338 -185237516 + AluSp SINE Alu 1 312 -1 1044 159 89 11 chr2 65450526 65450797 -185237057 + AluSc SINE Alu 2 293 -6 2084 86 7 7 chr2 65450844 65451134 -185236720 + AluSx SINE Alu 1 290 -22 2050 117 3 0 chr2 65452350 65452648 -185235206 + AluSx SINE Alu 1 299 -13 221 229 16 41 chr2 65455368 65455490 -185232364 + (CCCCG)n Simple_repeat Simple_repeat 2 120 0 288 0 0 0 chr2 65455699 65455731 -185232123 + (CA)n Simple_repeat Simple_repeat 2 33 0 289 250 0 0 chr2 65456115 65456187 -185231667 + (CTG)n Simple_repeat Simple_repeat 2 73 0 243 211 0 56 chr2 65456462 65456565 -185231289 + G-rich Low_complexity Low_complexity 1 97 0 451 175 89 70 chr2 65457890 65458142 -185229712 - MER2 DNA MER2_type 0 345 97 463 95 0 152 chr2 65458142 65458209 -185229645 - MER6 DNA MER2_type 0 865 818 1953 127 7 0 chr2 65458209 65458516 -185229338 + AluSx SINE Alu 1 309 -3 463 95 0 152 chr2 65458516 65458553 -185229301 - MER6 DNA MER2_type -47 818 777 1771 114 4 39 chr2 65458553 65458833 -185229021 + AluJb SINE Alu 21 290 -22 435 248 141 8 chr2 65458899 65459020 -185228834 - FLAM_A SINE Alu -5 137 1 374 229 49 59 chr2 65459021 65459164 -185228690 + L1MC4 LINE L1 1968 6976 -1346 824 129 23 15 chr2 65459164 65459296 -185228558 - FLAM_C SINE Alu -8 135 3 1626 207 53 22 chr2 65459782 65460139 -185227715 - MLT1A2 LTR MaLR -6 368 1 2050 117 3 10 chr2 65460236 65460544 -185227310 + AluSc SINE Alu 1 306 -3 990 91 8 0 chr2 65460546 65460678 -185227176 + AluSq/x SINE Alu 1 133 -179 1366 194 20 7 chr2 65460681 65460974 -185226880 + AluJo SINE Alu 1 297 -15 204 226 0 0 chr2 65461001 65461054 -185226800 + A-rich Low_complexity Low_complexity 1 53 0 849 189 18 12 chr2 65461263 65461427 -185226427 + MER20 DNA MER1_type 55 219 0 1696 185 0 6 chr2 65461538 65461852 -185226002 - AluJb SINE Alu 0 312 1 591 193 47 76 chr2 65462074 65462117 -185225737 - MIR SINE MIR -1 261 218 2260 95 0 3 chr2 65462117 65462421 -185225433 - AluY SINE Alu -8 303 1 591 193 47 76 chr2 65462421 65462548 -185225306 - MIR SINE MIR -44 218 96 1855 158 3 7 chr2 65462761 65463065 -185224789 - AluJb SINE Alu -5 307 5 2008 94 17 10 chr2 65463585 65463882 -185223972 + AluSp SINE Alu 3 301 -12 289 180 33 0 chr2 65463883 65463944 -185223910 - L1MC4 LINE L1 -18 8024 7962 316 204 11 97 chr2 65463961 65463997 -185223857 + AluJ/FRAM SINE Alu 217 255 -47 3773 92 0 21 chr2 65463997 65464334 -185223520 - MER9 LTR ERVK 0 511 187 2169 90 0 7 chr2 65464334 65464656 -185223198 + AluSc SINE Alu 1 309 0 3773 92 0 21 chr2 65464656 65464840 -185223014 - MER9 LTR ERVK -324 187 1 316 204 11 97 chr2 65464840 65464896 -185222958 + AluJ/FRAM SINE Alu 255 301 -1 2136 122 0 3 chr2 65464900 65465211 -185222643 + AluSg SINE Alu 1 310 0 2063 126 0 0 chr2 65465216 65465509 -185222345 + AluSx SINE Alu 1 293 -19 1136 129 12 0 chr2 65465509 65465679 -185222175 + AluSg/x SINE Alu 132 303 -7 1029 175 25 0 chr2 65465808 65465993 -185221861 - AluJb SINE Alu 0 312 120 272 26 0 26 chr2 65465993 65466031 -185221823 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1029 175 25 0 chr2 65466031 65466045 -185221809 - AluJb SINE Alu -192 120 108 1919 132 3 3 chr2 65466178 65466473 -185221381 - AluSx SINE Alu -12 300 6 38 22 0 0 chr2 65466676 65466721 -185221133 + AT_rich Low_complexity Low_complexity 1 45 0 772 132 26 0 chr2 65466721 65466835 -185221019 - AluJb SINE Alu -194 118 2 2019 69 29 4 chr2 65466843 65467142 -185220712 - AluY SINE Alu 0 308 3 2096 234 60 27 chr2 65467299 65467627 -185220227 + L1MC4a LINE L1 5254 5609 -2199 2156 111 0 3 chr2 65467627 65467925 -185219929 + AluSx SINE Alu 1 297 -15 2096 234 60 27 chr2 65467925 65468148 -185219706 + L1MC4a LINE L1 5609 5823 -1985 967 91 8 0 chr2 65468154 65468286 -185219568 + AluSq/x SINE Alu 3 135 -178 2074 88 14 3 chr2 65468286 65468582 -185219272 + AluY SINE Alu 1 299 -12 22 0 0 0 chr2 65468582 65468604 -185219250 + AT_rich Low_complexity Low_complexity 1 22 0 1615 107 4 4 chr2 65468631 65468864 -185218990 + AluSg SINE Alu 57 289 -21 216 0 0 0 chr2 65468867 65468891 -185218963 + (TATAA)n Simple_repeat Simple_repeat 2 25 0 2340 76 3 0 chr2 65468909 65469211 -185218643 + AluSp SINE Alu 3 305 -8 657 96 0 11 chr2 65469211 65469305 -185218549 + AluSq SINE Alu 134 226 -87 452 217 93 16 chr2 65469312 65469441 -185218413 + L1MC4a LINE L1 5812 5950 -1858 1342 162 17 67 chr2 65469497 65469794 -185218060 + AluJb SINE Alu 16 297 -15 2104 109 0 10 chr2 65469843 65470146 -185217708 + AluSg SINE Alu 1 300 -10 2307 88 0 0 chr2 65470495 65470802 -185217052 - AluY SINE Alu -4 307 1 256 254 45 64 chr2 65470854 65470964 -185216890 + L2 LINE L2 3158 3265 -7 346 326 121 52 chr2 65470966 65471200 -185216654 - L2 LINE L2 -1 3271 3010 2191 110 0 0 chr2 65471200 65471509 -185216345 + AluSq SINE Alu 1 309 -4 346 326 121 52 chr2 65471509 65471581 -185216273 - L2 LINE L2 -262 3010 2944 1574 172 30 14 chr2 65471794 65472091 -185215763 + AluJb SINE Alu 6 307 -5 24 0 0 0 chr2 65472639 65472663 -185215191 + AT_rich Low_complexity Low_complexity 1 24 0 2269 93 3 3 chr2 65472685 65472995 -185214859 - AluSx SINE Alu -2 310 1 767 188 0 0 chr2 65473191 65473329 -185214525 + FLAM_C SINE Alu 4 141 -2 1547 158 50 11 chr2 65473843 65474121 -185213733 - AluJb SINE Alu -19 293 5 812 224 30 59 chr2 65474432 65474669 -185213185 - MIR SINE MIR -2 260 31 2230 98 0 3 chr2 65474670 65474976 -185212878 - AluY SINE Alu -6 305 1 2142 102 3 0 chr2 65474978 65475273 -185212581 - AluY SINE Alu -15 296 1 1254 157 0 14 chr2 65475333 65475549 -185212305 + AluJo SINE Alu 85 297 -15 429 125 0 100 chr2 65475554 65475634 -185212220 - FLAM_A SINE Alu -36 106 35 1059 101 25 0 chr2 65475637 65475796 -185212058 + L1MA6 LINE L1 6138 6300 0 2307 93 0 0 chr2 65475803 65476105 -185211749 + AluSx SINE Alu 1 302 -10 1493 166 24 10 chr2 65476179 65476468 -185211386 + AluJb SINE Alu 1 293 -19 829 197 79 0 chr2 65476474 65476626 -185211228 + FRAM SINE Alu 1 162 -14 328 227 40 13 chr2 65477132 65477166 -185210688 + (TA)n Simple_repeat Simple_repeat 2 34 -121 1781 142 0 7 chr2 65477166 65477454 -185210400 + AluSx SINE Alu 1 286 -26 328 227 40 13 chr2 65477454 65477569 -185210285 + (TA)n Simple_repeat Simple_repeat 34 155 0 2013 109 0 0 chr2 65477702 65477978 -185209876 - AluSx SINE Alu -31 281 6 1690 164 3 10 chr2 65478008 65478300 -185209554 - AluJo SINE Alu -20 292 3 279 0 0 0 chr2 65478301 65478332 -185209522 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1939 96 37 0 chr2 65478334 65478606 -185209248 - AluSx SINE Alu -30 282 1 289 217 78 62 chr2 65478668 65478797 -185209057 - L2 LINE L2 0 3313 3183 2244 84 0 0 chr2 65478802 65479098 -185208756 + AluY SINE Alu 1 296 -15 303 382 16 21 chr2 65479113 65479299 -185208555 + L2 LINE L2 2490 2674 -640 876 164 0 0 chr2 65479325 65479471 -185208383 - AluJb SINE Alu -30 282 137 289 272 107 70 chr2 65479899 65480140 -185207714 - L2 LINE L2 -275 2997 2736 2042 111 10 3 chr2 65480141 65480448 -185207406 - AluSc SINE Alu 0 309 1 1693 150 14 14 chr2 65480455 65480741 -185207113 - AluJo SINE Alu -24 288 3 2374 76 0 0 chr2 65481034 65481338 -185206516 - AluY SINE Alu -7 304 1 2255 98 7 0 chr2 65481349 65481655 -185206199 - AluSp SINE Alu -5 308 1 408 309 9 0 chr2 65481689 65481799 -185206055 + L2 LINE L2 3201 3311 -2 1582 193 0 46 chr2 65481856 65482183 -185205671 + AluJb SINE Alu 1 312 0 668 122 0 0 chr2 65482186 65482276 -185205578 + AluS SINE Alu 2 91 -222 1431 160 4 16 chr2 65482277 65482368 -185205486 + AluSx SINE Alu 46 137 -175 2002 117 7 7 chr2 65482368 65482667 -185205187 + AluSx SINE Alu 1 299 -13 1431 160 4 16 chr2 65482667 65482825 -185205029 + AluSx SINE Alu 137 292 -20 21 82 0 0 chr2 65482922 65482971 -185204883 + AT_rich Low_complexity Low_complexity 1 49 0 207 275 29 14 chr2 65483060 65483129 -185204725 + L2 LINE L2 3242 3311 -2 236 275 87 0 chr2 65483333 65483402 -185204452 - MIR3 SINE MIR -132 76 2 2082 73 30 23 chr2 65485250 65485552 -185202302 - AluY SINE Alu -7 304 1 32 26 0 0 chr2 65485809 65485848 -185202006 + AT_rich Low_complexity Low_complexity 1 39 0 596 175 0 0 chr2 65485895 65485992 -185201862 + AluJ/FLAM SINE Alu 3 99 -213 1473 154 0 4 chr2 65486007 65486247 -185201607 + AluJb SINE Alu 73 311 -1 2103 97 0 47 chr2 65486253 65486399 -185201455 + AluSx SINE Alu 1 152 -160 2287 81 0 3 chr2 65486399 65486707 -185201147 + AluY SINE Alu 1 307 -4 2103 97 0 47 chr2 65486707 65486881 -185200973 + AluSx SINE Alu 152 306 -6 21 36 0 0 chr2 65486913 65486941 -185200913 + AT_rich Low_complexity Low_complexity 1 28 0 551 108 0 0 chr2 65487000 65487083 -185200771 - Alu SINE Alu -5 306 224 1638 127 27 33 chr2 65487575 65487874 -185199980 + AluJo SINE Alu 4 300 -12 2316 59 0 3 chr2 65487900 65488205 -185199649 + AluY SINE Alu 1 304 -7 23 68 0 0 chr2 65488546 65488590 -185199264 + AT_rich Low_complexity Low_complexity 1 44 0 704 152 23 30 chr2 65488590 65488722 -185199132 + AluJo SINE Alu 85 215 -97 400 264 66 0 chr2 65489734 65489840 -185198014 - MER34 LTR ERV1 -44 498 386 2302 70 10 0 chr2 65489841 65490140 -185197714 + AluY SINE Alu 1 302 -9 257 219 16 0 chr2 65490155 65490219 -185197635 + AluSp/q SINE Alu 232 296 -7 2104 134 0 0 chr2 65490256 65490561 -185197293 + AluSx SINE Alu 1 305 -7 4926 122 39 13 chr2 65490563 65491391 -185196463 + L1P3 LINE L1 939 1814 -4644 420 82 0 0 chr2 65491392 65491453 -185196401 + (TTTG)n Simple_repeat Simple_repeat 4 64 0 1538 181 0 0 chr2 65491453 65491713 -185196141 - AluSg SINE Alu -32 278 19 739 82 0 0 chr2 65491876 65491973 -185195881 + AluY SINE Alu 204 300 -11 273 98 0 0 chr2 65492056 65492097 -185195757 + (CA)n Simple_repeat Simple_repeat 2 42 0 2088 125 0 3 chr2 65492116 65492421 -185195433 + AluSq SINE Alu 1 304 -9 2458 58 0 10 chr2 65492423 65492732 -185195122 + AluY SINE Alu 1 306 -5 1195 124 0 0 chr2 65492732 65492901 -185194953 + AluSp SINE Alu 134 302 -11 379 131 49 0 chr2 65493136 65493197 -185194657 + MER4A LTR ERV1 556 619 -45 2040 143 0 0 chr2 65493206 65493513 -185194341 + AluSx SINE Alu 3 309 -3 2038 112 14 0 chr2 65494485 65494781 -185193073 - AluSx SINE Alu -12 300 1 248 261 15 15 chr2 65494784 65494849 -185193005 + L2 LINE L2 3204 3268 -4 261 229 34 102 chr2 65495096 65495214 -185192640 + L2 LINE L2 2614 2723 -591 1744 179 3 3 chr2 65495252 65495564 -185192290 + AluJb SINE Alu 1 312 0 541 248 23 8 chr2 65495662 65495791 -185192063 + L2 LINE L2 2921 3051 -262 321 151 0 0 chr2 65495805 65495858 -185191996 + MER74B LTR ERVL 1 53 -569 204 67 0 0 chr2 65495894 65495924 -185191930 + (CA)n Simple_repeat Simple_repeat 1 30 0 662 169 0 78 chr2 65495949 65496091 -185191763 + FLAM_C SINE Alu 1 131 -2 1333 216 66 0 chr2 65496096 65496397 -185191457 + MER74B LTR ERVL 205 525 -97 39 60 0 0 chr2 65496513 65496580 -185191274 + GC_rich Low_complexity Low_complexity 1 67 0 405 0 0 0 chr2 65496691 65496736 -185191118 + (CTATT)n Simple_repeat Simple_repeat 1 45 0 4027 216 17 17 chr2 65496750 65497153 -185190701 - L1M4 LINE L1 -1359 4787 4385 2127 112 0 0 chr2 65497153 65497448 -185190406 - AluSq SINE Alu -18 295 1 4027 216 17 17 chr2 65497448 65498037 -185189817 - L1M4 LINE L1 -1760 4386 3795 1361 227 37 0 chr2 65498040 65498366 -185189488 + L1M4 LINE L1 4106 4443 -1703 * 1541 104 40 12 chr2 65498342 65498592 -185189262 + L1PA16 LINE L1 5660 5916 -250 1360 209 4 14 chr2 65498692 65498970 -185188884 + AluJo SINE Alu 37 311 -1 684 185 0 37 chr2 65498971 65499114 -185188740 - MER33 DNA MER1_type -244 80 1 620 330 58 43 chr2 65499204 65499670 -185188184 + L2 LINE L2 2837 3309 -4 2276 115 3 6 chr2 65499685 65500038 -185187816 - AluSx SINE Alu 0 352 1 2323 58 0 89 chr2 65500046 65500371 -185187483 - AluY SINE Alu -15 296 1 855 107 0 0 chr2 65500709 65500821 -185187033 + AluSq/x SINE Alu 3 114 -199 1281 71 0 7 chr2 65500921 65501075 -185186779 - AluY SINE Alu -158 153 1 2078 125 0 4 chr2 65501105 65501385 -185186469 - AluSx SINE Alu -28 284 6 2273 90 0 27 chr2 65501767 65502068 -185185786 + AluSg SINE Alu 1 293 -17 2184 141 0 0 chr2 65502250 65502562 -185185292 - AluSx SINE Alu 0 312 1 2077 116 18 0 chr2 65502613 65502911 -185184943 - AluSx SINE Alu 0 303 1 231 336 20 17 chr2 65503102 65503300 -185184554 + C-rich Low_complexity Low_complexity 1 198 0 231 103 0 0 chr2 65503497 65503517 -185184337 + (TAGA)n Simple_repeat Simple_repeat 1 59 0 231 103 0 0 chr2 65503517 65503556 -185184298 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 758 158 17 0 chr2 65503641 65503761 -185184093 - FLAM_A SINE Alu -13 129 8 2060 150 0 7 chr2 65503773 65504079 -185183775 - AluSx SINE Alu -8 304 1 1478 188 33 14 chr2 65504127 65504403 -185183451 - AluJo SINE Alu -31 281 1 1248 187 42 0 chr2 65504420 65504682 -185183172 - L1MA9 LINE L1 -39 6273 6001 1947 175 139 34 chr2 65504728 65505224 -185182630 + LTR10A LTR ERV1 1 548 -61 387 134 179 0 chr2 65505237 65505304 -185182550 - MLT1D LTR MaLR -426 79 1 808 196 0 0 chr2 65506044 65506177 -185181677 - AluSq/x SINE Alu -180 133 1 622 173 62 106 chr2 65506321 65506500 -185181354 - AluJb SINE Alu -5 307 137 820 139 0 0 chr2 65506615 65506730 -185181124 + AluSg/x SINE Alu 167 281 -29 2091 107 0 50 chr2 65506973 65507290 -185180564 - AluSq SINE Alu -12 301 1 225 276 114 16 chr2 65507455 65507578 -185180276 - L1MEd LINE L1 -5983 136 2 1328 159 4 9 chr2 65507646 65507872 -185179982 - AluJo SINE Alu 0 312 88 23 0 0 0 chr2 65507881 65507904 -185179950 + AT_rich Low_complexity Low_complexity 1 23 0 1440 199 26 22 chr2 65507941 65508213 -185179641 + AluJb SINE Alu 31 303 -9 2002 128 4 4 chr2 65508218 65508499 -185179355 + AluSx SINE Alu 2 282 -30 202 143 24 0 chr2 65508535 65508577 -185179277 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 259 128 21 0 chr2 65508585 65508632 -185179222 - L1MB8 LINE L1 -19 6159 6112 2319 97 0 10 chr2 65508633 65508932 -185178922 + AluSq SINE Alu 1 296 -17 975 137 55 0 chr2 65508932 65509140 -185178714 + AluSg/x SINE Alu 134 349 0 1461 175 93 4 chr2 65509155 65509412 -185178442 + AluJb SINE Alu 1 280 -32 322 21 21 21 chr2 65509413 65509461 -185178393 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 265 290 20 10 chr2 65509465 65509565 -185178289 - L1MB8 LINE L1 -61 6117 6017 228 259 0 0 chr2 65509971 65510025 -185177829 - MER57B LTR ERV1 -55 379 326 492 90 0 0 chr2 65510209 65510276 -185177578 - MSTB1 LTR MaLR -365 67 1 649 217 39 0 chr2 65510276 65510405 -185177449 + LTR16A LTR ERVL 199 332 -118 296 342 26 8 chr2 65510495 65510612 -185177242 - MIR SINE MIR -74 134 16 24 0 0 0 chr2 65510828 65510852 -185177002 + AT_rich Low_complexity Low_complexity 1 24 0 1545 164 52 21 chr2 65510861 65511147 -185176707 - AluJb SINE Alu -17 295 1 439 290 96 88 chr2 65511219 65511584 -185176270 + MLT1K LTR MaLR 190 557 -31 426 277 62 31 chr2 65511780 65511975 -185175879 - L1ME LINE L1 -335 5786 5586 1592 170 13 55 chr2 65512049 65512360 -185175494 - AluJo SINE Alu -14 298 1 2400 81 0 16 chr2 65512763 65513070 -185174784 - AluY SINE Alu -9 302 1 521 212 8 17 chr2 65513146 65513264 -185174590 + L2 LINE L2 3197 3313 0 1322 126 0 0 chr2 65513303 65513477 -185174377 - AluJb SINE Alu -138 174 1 2022 92 24 38 chr2 65513862 65514155 -185173699 - AluSx SINE Alu -23 289 1 1806 303 40 20 chr2 65514239 65514886 -185172968 - HERV16 LTR ERVL -4278 718 59 577 202 230 39 chr2 65514928 65515013 -185172841 - LTR16A LTR ERVL -6 444 377 1913 103 0 8 chr2 65515013 65515290 -185172564 + AluSx SINE Alu 35 309 0 577 202 230 39 chr2 65515290 65515381 -185172473 - LTR16A LTR ERVL -73 377 233 1549 182 96 88 chr2 65515387 65515941 -185171913 + LTR49 LTR ERV1 5 562 -33 25 21 0 43 chr2 65515948 65515966 -185171888 + AT_rich Low_complexity Low_complexity 1 18 -27 1625 158 73 0 chr2 65515966 65516238 -185171616 + AluJb SINE Alu 2 293 -19 25 21 0 43 chr2 65516238 65516266 -185171588 + AT_rich Low_complexity Low_complexity 18 45 0 851 145 0 0 chr2 65516275 65516399 -185171455 + FLAM_C SINE Alu 3 126 -17 417 272 36 45 chr2 65516482 65516706 -185171148 - LTR16A LTR ERVL -222 228 7 2249 108 7 3 chr2 65516928 65517233 -185170621 - AluSx SINE Alu -6 306 1 355 307 14 43 chr2 65517234 65517374 -185170480 - MIR SINE MIR -57 151 16 23 33 0 0 chr2 65517500 65517530 -185170324 + AT_rich Low_complexity Low_complexity 1 30 0 1822 70 8 8 chr2 65518161 65518402 -185169452 + LTR9 LTR ERV1 1 241 -371 3305 156 38 58 chr2 65518503 65518952 -185168902 + L1MB5 LINE L1 5345 5802 -372 276 30 0 0 chr2 65518952 65518985 -185168869 + (CA)n Simple_repeat Simple_repeat 2 34 0 3305 156 38 58 chr2 65518985 65519135 -185168719 + L1MB5 LINE L1 5802 5931 -243 1828 142 14 14 chr2 65519135 65519440 -185168414 + AluJb SINE Alu 7 312 0 3305 156 38 58 chr2 65519440 65519523 -185168331 + L1MB5 LINE L1 5931 6014 -160 365 120 0 0 chr2 65519547 65519597 -185168257 + tRNA-Lys-AAA tRNA tRNA 27 76 0 3167 120 2 2 chr2 65519600 65520032 -185167822 - LTR3 LTR ERVK 0 432 1 21 57 0 0 chr2 65520089 65520124 -185167730 + AT_rich Low_complexity Low_complexity 1 35 0 537 265 42 0 chr2 65520154 65520320 -185167534 + L1M4 LINE L1 4415 4587 -1559 990 226 28 23 chr2 65520322 65520539 -185167315 - MER20 DNA MER1_type -1 218 1 2057 151 3 0 chr2 65520544 65520855 -185166999 + AluJb SINE Alu 1 312 0 260 278 87 0 chr2 65520858 65520973 -185166881 + L1M4 LINE L1 5023 5147 -999 824 225 64 36 chr2 65520973 65521209 -185166645 - MLT1C LTR MaLR -2 465 223 3256 143 2 8 chr2 65521209 65521785 -185166069 + MER41B LTR ERV1 1 635 0 1444 184 77 25 chr2 65521839 65522165 -185165689 - LOR1b LTR ERV1 0 461 119 580 42 0 0 chr2 65522193 65522264 -185165590 - MER41A LTR ERV1 -86 468 398 855 163 0 0 chr2 65522281 65522404 -185165450 - FLAM_C SINE Alu -18 125 3 416 183 100 67 chr2 65522408 65522528 -185165326 - MLT1C LTR MaLR -343 124 1 1908 156 3 0 chr2 65522556 65522877 -185164977 + AluJo SINE Alu 1 322 0 947 176 152 25 chr2 65522880 65523084 -185164770 + AluJo SINE Alu 1 230 -82 1623 91 0 5 chr2 65523184 65523392 -185164462 - AluSc SINE Alu -102 207 1 198 118 0 0 chr2 65523466 65523500 -185164354 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 2177 88 4 0 chr2 65523504 65523778 -185164076 - AluSx SINE Alu -37 275 1 206 195 0 0 chr2 65524354 65524395 -185163459 - L2 LINE L2 0 3313 3273 2317 99 0 0 chr2 65524485 65524777 -185163077 - AluSc SINE Alu -17 292 1 1856 143 0 20 chr2 65525139 65525433 -185162421 - AluJb SINE Alu -24 288 1 353 266 0 21 chr2 65525713 65525807 -185162047 - L2 LINE L2 0 3313 3222 1791 155 16 50 chr2 65526038 65526355 -185161499 + AluJo SINE Alu 1 306 -6 1848 117 71 37 chr2 65526582 65526908 -185160946 + MER1B DNA MER1_type 1 337 0 23 33 0 0 chr2 65527575 65527605 -185160249 + AT_rich Low_complexity Low_complexity 1 30 0 368 201 104 28 chr2 65528031 65528152 -185159702 - L1ME4a LINE L1 0 6121 5986 2424 88 0 3 chr2 65528152 65528459 -185159395 - AluSx SINE Alu 0 312 7 368 201 104 28 chr2 65528459 65528481 -185159373 - L1ME4a LINE L1 -135 5986 5967 662 130 8 107 chr2 65528502 65528633 -185159221 - FLAM_C SINE Alu -15 118 1 25 0 0 0 chr2 65528795 65528820 -185159034 + AT_rich Low_complexity Low_complexity 1 25 0 197 360 27 0 chr2 65529628 65529739 -185158115 + MIR3 SINE MIR 89 202 -6 1747 152 13 33 chr2 65529795 65530097 -185157757 - AluJb SINE Alu -16 296 1 208 300 0 0 chr2 65530289 65530339 -185157515 - L2 LINE L2 -16 3256 3207 446 244 46 56 chr2 65530384 65530581 -185157273 + L1ME3A LINE L1 5566 5760 -361 1995 160 0 3 chr2 65530725 65531031 -185156823 - AluJb SINE Alu 0 312 8 244 146 36 0 chr2 65531711 65531766 -185156088 - L1P LINE L1 -745 5409 5353 2335 81 0 66 chr2 65532160 65532492 -185155362 + AluSx SINE Alu 1 310 -2 529 58 0 0 chr2 65532503 65532572 -185155282 + MER41A LTR ERV1 401 469 -85 705 295 5 9 chr2 65533039 65533249 -185154605 - LTR16B LTR ERVL -12 452 244 431 212 183 0 chr2 65533323 65533460 -185154394 + L1ME3A LINE L1 5996 6157 -13 2228 118 0 0 chr2 65533581 65533885 -185153969 + AluSx SINE Alu 1 304 -8 618 289 69 31 chr2 65533925 65534372 -185153482 + L1ME4a LINE L1 5634 6097 -24 561 152 54 0 chr2 65534375 65534467 -185153387 - Tigger5 DNA MER2_type 0 2323 2227 2059 129 0 31 chr2 65534467 65534784 -185153070 + AluSg SINE Alu 1 307 -3 1578 91 5 0 chr2 65535581 65535778 -185152076 + AluSg/x SINE Alu 98 295 -17 209 245 20 0 chr2 65535896 65535945 -185151909 + L2 LINE L2 3244 3293 -20 199 200 0 44 chr2 65535914 65535959 -185151895 + MIR SINE MIR 218 260 -2 * 495 0 0 0 chr2 65535978 65536033 -185151821 + (TATTG)n Simple_repeat Simple_repeat 2 56 0 2414 96 3 6 chr2 65537056 65537369 -185150485 - AluSp SINE Alu -1 312 1 222 338 134 7 chr2 65537882 65538024 -185149830 + MIR SINE MIR 2 161 -101 2085 115 3 7 chr2 65538383 65538678 -185149176 - AluSx SINE Alu -18 294 1 1699 167 7 24 chr2 65538686 65538979 -185148875 - AluJo SINE Alu -23 289 2 231 316 0 0 chr2 65539275 65539354 -185148500 - L2 LINE L2 -699 2615 2537 505 315 101 62 chr2 65539729 65540135 -185147719 - L2 LINE L2 0 3272 2851 * 521 294 85 3 chr2 65540110 65540392 -185147462 - L2 LINE L2 -1212 2102 1798 1000 237 62 69 chr2 65540461 65540879 -185146975 - MLT1J LTR MaLR -75 436 22 288 345 116 62 chr2 65540895 65541011 -185146843 - L2 LINE L2 -1507 1807 1699 2226 91 14 0 chr2 65541011 65541319 -185146535 + AluSq SINE Alu 1 312 0 288 345 116 62 chr2 65541319 65541649 -185146205 - L2 LINE L2 -1615 1699 1335 1567 82 116 9 chr2 65542524 65542757 -185145097 - MSTA LTR MaLR 0 428 171 813 133 8 16 chr2 65542757 65542885 -185144969 + FLAM_C SINE Alu 4 130 -13 902 131 150 6 chr2 65542890 65543050 -185144804 - MSTA LTR MaLR -245 183 1 1165 89 0 0 chr2 65543740 65543897 -185143957 - AluSg/x SINE Alu -19 291 135 2432 68 0 16 chr2 65543956 65544266 -185143588 - AluY SINE Alu -6 305 1 21 36 0 0 chr2 65544341 65544369 -185143485 + AT_rich Low_complexity Low_complexity 1 28 0 247 346 61 19 chr2 65544962 65545029 -185142825 - L2 LINE L2 -212 3060 2997 2104 150 0 0 chr2 65545029 65545329 -185142525 + AluSx SINE Alu 1 300 -12 247 346 61 19 chr2 65545329 65545475 -185142379 - L2 LINE L2 -275 2997 2838 1307 196 14 22 chr2 65545713 65546178 -185141676 + MLT1F1 LTR MaLR 1 567 0 2069 102 17 14 chr2 65546199 65546493 -185141361 - AluSq SINE Alu -18 295 1 21 0 0 0 chr2 65547443 65547464 -185140390 + AT_rich Low_complexity Low_complexity 1 21 0 1077 246 107 57 chr2 65547901 65548133 -185139721 + Tigger8 DNA MER2_type 40 259 -407 2168 126 0 7 chr2 65548133 65548443 -185139411 + AluSx SINE Alu 4 311 -1 1077 246 107 57 chr2 65548443 65548686 -185139168 + Tigger8 DNA MER2_type 259 539 -127 1634 159 24 27 chr2 65548686 65548981 -185138873 + AluJb SINE Alu 2 295 -17 1109 124 6 11 chr2 65549748 65549925 -185137929 + MER50 LTR ERV1 1 176 -558 1178 129 41 0 chr2 65549928 65550099 -185137755 + AluSg/x SINE Alu 132 309 -1 2117 133 7 0 chr2 65550130 65550430 -185137424 + AluJb SINE Alu 1 302 -10 189 107 0 0 chr2 65550433 65550461 -185137393 + (GGAAA)n Simple_repeat Simple_repeat 3 30 0 339 68 0 0 chr2 65550461 65550505 -185137349 + MER50 LTR ERV1 182 225 -509 * 1371 127 12 63 chr2 65550502 65550569 -185137285 + MER50 LTR ERV1 433 502 -232 2163 80 3 33 chr2 65550569 65550869 -185136985 + AluY SINE Alu 1 291 -20 1371 127 12 63 chr2 65550869 65551054 -185136800 + MER50 LTR ERV1 502 672 -62 412 143 8 47 chr2 65551550 65551797 -185136057 + AluJo SINE Alu 7 296 -16 2060 55 0 20 chr2 65551910 65552164 -185135690 + AluSg SINE Alu 50 298 -12 397 149 0 64 chr2 65552164 65552258 -185135596 - L1M LINE L1 -2698 5344 5257 212 120 87 22 chr2 65552916 65553008 -185134846 + (TA)n Simple_repeat Simple_repeat 2 99 0 741 167 0 0 chr2 65553433 65553553 -185134301 + Tigger2 DNA MER2_type 1 120 -2598 2230 129 26 42 chr2 65553555 65553695 -185134159 + Tigger2 DNA MER2_type 2345 2486 -232 2138 108 58 0 chr2 65553695 65553990 -185133864 - AluSx SINE Alu 0 312 1 2230 129 26 42 chr2 65553990 65554229 -185133625 + Tigger2 DNA MER2_type 2486 2718 0 1658 181 0 21 chr2 65554370 65554657 -185133197 - AluJo SINE Alu -31 281 1 478 271 96 20 chr2 65554875 65555074 -185132780 - MIR SINE MIR -46 216 3 1322 265 101 20 chr2 65555103 65555499 -185132355 + MER69 DNA AcHobo 2 429 -2097 1830 128 0 0 chr2 65555544 65555787 -185132067 + AluSx SINE Alu 38 280 -32 201 315 109 0 chr2 65556276 65556368 -185131486 - MIR SINE MIR -88 120 19 370 170 100 10 chr2 65556610 65556710 -185131144 - MER112 DNA MER1_type 0 260 152 24 0 0 0 chr2 65556778 65556802 -185131052 + AT_rich Low_complexity Low_complexity 1 24 0 2507 64 0 0 chr2 65556854 65557152 -185130702 + AluY SINE Alu 1 298 -13 1179 175 9 108 chr2 65557954 65558122 -185129732 - AluJo SINE Alu -2 300 180 207 0 0 0 chr2 65558122 65558145 -185129709 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1179 175 9 108 chr2 65558145 65558308 -185129546 - AluJo SINE Alu -122 180 2 2259 115 0 6 chr2 65558320 65558634 -185129220 - AluSx SINE Alu 0 312 1 500 0 17 0 chr2 65559018 65559078 -185128776 + (TTTTA)n Simple_repeat Simple_repeat 2 62 0 1820 133 68 0 chr2 65559081 65559344 -185128510 - AluSx SINE Alu -31 281 1 782 160 8 8 chr2 65559512 65559643 -185128211 + FLAM_C SINE Alu 3 133 -10 256 163 61 20 chr2 65559740 65559838 -185128016 + (TA)n Simple_repeat Simple_repeat 1 102 0 1637 195 0 24 chr2 65559838 65560130 -185127724 - AluJb SINE Alu -27 285 1 438 242 76 15 chr2 65560462 65560594 -185127260 + MIR SINE MIR 56 195 -67 2497 57 7 0 chr2 65560645 65560941 -185126913 + AluY SINE Alu 1 298 -13 1403 296 16 8 chr2 65562754 65563133 -185124721 + MLT1K LTR MaLR 10 391 -197 702 265 12 44 chr2 65563539 65563788 -185124066 + L1MC4a LINE L1 6476 6716 -1092 2398 88 3 0 chr2 65564557 65564852 -185123002 - AluSp SINE Alu -17 296 1 1910 98 42 14 chr2 65565005 65565292 -185122562 - AluSx SINE Alu -2 310 16 283 268 98 0 chr2 65566143 65566259 -185121595 - MIR SINE MIR -64 144 36 198 0 0 0 chr2 65566615 65566637 -185121217 + (T)n Simple_repeat Simple_repeat 1 22 0 1903 85 0 0 chr2 65566651 65566886 -185120968 - AluSg SINE Alu -75 235 1 1993 152 0 3 chr2 65568158 65568454 -185119400 - AluJb SINE Alu -17 295 1 252 200 0 0 chr2 65568465 65568520 -185119334 + (CATA)n Simple_repeat Simple_repeat 2 56 0 2438 73 3 0 chr2 65568520 65568809 -185119045 - AluSp SINE Alu -23 290 1 1213 145 219 21 chr2 65568813 65568930 -185118924 - L1PA16 LINE L1 -5 6161 6068 207 0 0 0 chr2 65568930 65568953 -185118901 + (TCCC)n Simple_repeat Simple_repeat 1 23 0 1213 145 219 21 chr2 65568953 65569118 -185118736 - L1PA16 LINE L1 -98 6068 5823 2149 129 7 0 chr2 65569118 65569420 -185118434 - AluSx SINE Alu -8 304 1 718 213 0 0 chr2 65569423 65569564 -185118290 - FLAM_C SINE Alu 0 143 3 396 111 0 0 chr2 65569753 65569825 -185118029 + (TA)n Simple_repeat Simple_repeat 1 72 0 244 200 80 0 chr2 65569844 65569919 -185117935 - L1MC/D LINE L1 -1913 5895 5815 1261 272 15 42 chr2 65570730 65570831 -185117023 - L2 LINE L2 0 3313 3211 1791 170 10 3 chr2 65570831 65571137 -185116717 - AluJo SINE Alu -3 309 2 1261 272 15 42 chr2 65571137 65571436 -185116418 - L2 LINE L2 -102 3211 2924 2075 110 67 0 chr2 65571446 65571728 -185116126 - AluSx SINE Alu -11 301 1 1195 212 102 0 chr2 65571755 65572048 -185115806 - LTR50 LTR ERVL -472 323 1 224 281 0 111 chr2 65572424 65572511 -185115343 + L2 LINE L2 2928 3023 -249 2285 117 3 0 chr2 65572511 65572819 -185115035 - AluSx SINE Alu -3 309 1 1495 132 135 30 chr2 65572819 65573085 -185114769 - AluJb SINE Alu -18 294 1 224 281 0 111 chr2 65573085 65573149 -185114705 + L2 LINE L2 3021 3063 -209 310 51 0 0 chr2 65574784 65574823 -185113031 - AluSg/x SINE Alu -112 190 152 597 76 0 0 chr2 65574824 65574903 -185112951 + AluSg/x SINE Alu 205 283 -29 2651 203 65 0 chr2 65574925 65575510 -185112344 + MER63C DNA MER1_type 90 712 -218 2123 119 14 3 chr2 65575581 65575874 -185111980 - AluSq SINE Alu -17 296 1 226 83 56 0 chr2 65576032 65576068 -185111786 + L1M4 LINE L1 5546 5583 -601 516 203 119 10 chr2 65576471 65576644 -185111210 + L1M4 LINE L1 5495 5691 -479 2814 91 74 6 chr2 65576849 65577304 -185110550 - MER1A DNA MER1_type 0 529 1 431 264 43 14 chr2 65577630 65577770 -185110084 + HERV16 LTR ERVL 687 830 -4166 1056 309 40 5 chr2 65577910 65578289 -185109565 + HERV16 LTR ERVL 4104 4495 -1159 780 155 8 8 chr2 65578291 65578420 -185109434 + MLT1A1 LTR MaLR 1 129 -236 394 233 43 54 chr2 65578450 65578621 -185109233 + LTR16B LTR ERVL 15 190 -260 279 0 0 0 chr2 65578796 65578827 -185109027 + (TTG)n Simple_repeat Simple_repeat 2 32 0 2324 99 3 0 chr2 65578988 65579281 -185108573 + AluSp SINE Alu 1 294 -19 368 278 0 38 chr2 65579496 65579629 -185108225 - MIR SINE MIR -18 244 117 1739 146 0 79 chr2 65580153 65580483 -185107371 + AluJb SINE Alu 1 304 -8 1523 146 50 50 chr2 65580574 65580847 -185107007 - Charlie5 DNA MER1_type -8 2616 2341 2217 108 14 0 chr2 65580847 65581143 -185106711 + AluSx SINE Alu 1 300 -12 1523 146 50 50 chr2 65581143 65581252 -185106602 - Charlie5 DNA MER1_type -282 2342 2234 651 220 50 0 chr2 65581260 65581419 -185106435 - MER3 DNA MER1_type -87 122 3 411 301 29 15 chr2 65581578 65581714 -185106140 + MIR SINE MIR 8 145 -117 2287 112 0 3 chr2 65582553 65582865 -185104989 + AluSx SINE Alu 1 311 -1 229 312 85 21 chr2 65583058 65583199 -185104655 - L2 LINE L2 -208 3064 2915 425 316 200 30 chr2 65583302 65583955 -185103899 - L2 LINE L2 -560 2754 1923 213 65 0 0 chr2 65583955 65583986 -185103868 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 425 316 200 30 chr2 65583986 65584178 -185103676 - L2 LINE L2 -1391 1923 1765 187 272 74 49 chr2 65584191 65584272 -185103582 + MIR SINE MIR 180 262 0 1648 89 0 9 chr2 65584299 65584537 -185103317 + AluY SINE Alu 85 311 0 2380 79 0 3 chr2 65585049 65585340 -185102514 + AluSx SINE Alu 14 303 -9 431 258 58 0 chr2 65585703 65585858 -185101996 - HAL1 LINE L1 -115 2392 2229 227 282 28 0 chr2 65585949 65586020 -185101834 - HAL1b LINE L1 -437 911 839 204 67 0 0 chr2 65586028 65586058 -185101796 + (GTTTG)n Simple_repeat Simple_repeat 2 31 0 221 289 0 0 chr2 65586305 65586357 -185101497 + C-rich Low_complexity Low_complexity 1 52 0 2656 181 39 23 chr2 65586475 65587179 -185100675 + ERVL-B1 LTR ERVL 4920 5620 -34 2317 89 3 3 chr2 65587179 65587481 -185100373 + AluY SINE Alu 1 302 -9 2656 181 39 23 chr2 65587481 65587517 -185100337 + ERVL-B1 LTR ERVL 5620 5654 0 828 162 104 12 chr2 65587528 65587701 -185100153 + MLT2B1 LTR ERVL 17 205 -315 2008 122 0 50 chr2 65587716 65588036 -185099818 + AluSq SINE Alu 1 304 -9 1394 87 73 18 chr2 65588048 65588266 -185099588 - MER30 DNA MER1_type 0 230 1 1318 86 11 38 chr2 65588549 65588735 -185099119 - AluSg SINE Alu -129 181 1 1857 148 10 20 chr2 65588816 65589120 -185098734 + AluJo SINE Alu 1 301 -11 2072 128 17 3 chr2 65589125 65589421 -185098433 + AluSg SINE Alu 1 300 -10 718 213 56 6 chr2 65589432 65589592 -185098262 + FAM SINE Alu 2 169 -6 1090 204 67 41 chr2 65590032 65590143 -185097711 + AluJo SINE Alu 21 128 -184 267 103 0 0 chr2 65590143 65590182 -185097672 + (TA)n Simple_repeat Simple_repeat 1 39 0 1090 204 67 41 chr2 65590182 65590339 -185097515 + AluJo SINE Alu 128 296 -16 195 315 81 9 chr2 65590366 65590477 -185097377 - L2 LINE L2 -642 2672 2554 254 158 0 0 chr2 65590670 65590708 -185097146 - MER57A LTR ERV1 -66 337 300 2469 85 0 22 chr2 65591263 65591580 -185096274 + AluSg SINE Alu 1 310 0 1104 151 24 0 chr2 65591585 65591751 -185096103 + AluSg/x SINE Alu 120 289 -23 1561 104 0 9 chr2 65592211 65592433 -185095421 - AluSq SINE Alu -15 298 79 451 101 43 0 chr2 65592643 65592712 -185095142 - AluJo SINE Alu -176 136 65 1773 164 0 0 chr2 65592712 65592987 -185094867 + AluJo SINE Alu 15 289 -23 21 0 0 0 chr2 65593004 65593025 -185094829 + AT_rich Low_complexity Low_complexity 1 21 0 5625 208 95 52 chr2 65593025 65593558 -185094296 - L1ME LINE L1 -1808 4272 3764 2367 109 0 0 chr2 65593558 65593869 -185093985 - AluSq SINE Alu -2 311 1 5625 208 95 52 chr2 65593869 65594128 -185093726 - L1ME LINE L1 -2316 3764 3518 2493 150 10 0 chr2 65594128 65594527 -185093327 + MER57A LTR ERV1 1 403 0 5625 208 95 52 chr2 65594527 65594931 -185092923 - L1ME LINE L1 -2562 3518 3133 1898 153 0 3 chr2 65594931 65595246 -185092608 - AluJb SINE Alu 0 314 1 5625 208 95 52 chr2 65595246 65596240 -185091614 - L1ME LINE L1 -2947 3133 2184 2208 114 3 0 chr2 65596240 65596530 -185091324 - AluSq SINE Alu -22 291 1 5625 208 95 52 chr2 65596530 65596867 -185090987 - L1ME LINE L1 -3896 2184 1863 1921 133 49 0 chr2 65596867 65597152 -185090702 - AluSx SINE Alu -13 299 1 5625 208 95 52 chr2 65597152 65597488 -185090366 - L1ME LINE L1 -4217 1863 1543 1209 173 105 58 chr2 65597488 65597765 -185090089 + AluJo SINE Alu 1 290 -22 5625 208 95 52 chr2 65597765 65597923 -185089931 - L1ME LINE L1 -4537 1543 1106 423 79 32 0 chr2 65597927 65597990 -185089864 - AluSx SINE Alu -8 301 237 2328 154 53 26 chr2 65598004 65598420 -185089434 - LTR3 LTR ERVK -5 427 1 1842 124 0 0 chr2 65598420 65598662 -185089192 - AluSx SINE Alu -70 242 1 1635 224 59 82 chr2 65598685 65598955 -185088899 - L1ME LINE L1 -4989 1094 819 2338 116 0 3 chr2 65598955 65599266 -185088588 + AluSq SINE Alu 1 310 -3 1635 224 59 82 chr2 65599266 65599702 -185088152 - L1ME LINE L1 -5264 819 391 1969 141 24 0 chr2 65599882 65600179 -185087675 - AluJb SINE Alu -8 304 1 26 0 0 0 chr2 65600899 65600925 -185086929 + AT_rich Low_complexity Low_complexity 1 26 0 2312 91 3 0 chr2 65601218 65601503 -185086351 + AluSp SINE Alu 1 286 -27 1935 152 3 3 chr2 65601535 65601824 -185086030 + AluJb SINE Alu 1 289 -23 1372 231 74 60 chr2 65601866 65602369 -185085485 - MLT1J LTR MaLR -1 510 1 257 313 8 31 chr2 65602383 65602511 -185085343 - MLT1K LTR MaLR -10 578 454 2330 78 7 0 chr2 65602515 65602808 -185085046 - AluSx SINE Alu -17 295 1 2240 172 51 17 chr2 65602841 65603254 -185084600 + MSTA LTR MaLR 1 427 -1 365 286 19 0 chr2 65603413 65603518 -185084336 - MER81 DNA DNA -4 110 4 603 256 65 11 chr2 65604292 65604538 -185083316 + MLT1I LTR MaLR 64 400 -9 46 54 0 0 chr2 65604847 65604921 -185082933 + AT_rich Low_complexity Low_complexity 1 74 0 2055 148 0 0 chr2 65605034 65605344 -185082510 + AluSx SINE Alu 1 310 -2 27 61 0 15 chr2 65606291 65606331 -185081523 + AT_rich Low_complexity Low_complexity 1 41 -24 822 167 0 0 chr2 65606331 65606457 -185081397 - FLAM_A SINE Alu -7 126 1 27 61 0 15 chr2 65606457 65606482 -185081372 + AT_rich Low_complexity Low_complexity 41 65 0 1991 149 0 0 chr2 65606482 65606770 -185081084 - AluSx SINE Alu -24 288 1 946 144 67 0 chr2 65606770 65606950 -185080904 - L1MC2 LINE L1 -16 6328 6137 1173 161 96 8 chr2 65606950 65607199 -185080655 - L1MC3 LINE L1 -191 7594 7324 1720 180 78 9 chr2 65607924 65608246 -185079608 + MSTB1 LTR MaLR 4 347 -85 2102 113 3 10 chr2 65608258 65608550 -185079304 + AluSq SINE Alu 6 295 -18 2345 94 7 3 chr2 65608551 65608860 -185078994 + AluY SINE Alu 2 311 0 34 0 0 0 chr2 65608860 65608894 -185078960 + AT_rich Low_complexity Low_complexity 1 34 0 882 197 53 76 chr2 65608950 65609046 -185078808 + MLT1A2 LTR MaLR 49 146 -228 2390 89 16 0 chr2 65609046 65609350 -185078504 - AluY SINE Alu -2 309 1 882 197 53 76 chr2 65609350 65609517 -185078337 + MLT1A2 LTR MaLR 146 306 -68 2051 125 14 0 chr2 65609539 65609820 -185078034 - AluSx SINE Alu -27 285 1 234 259 199 76 chr2 65609820 65609919 -185077935 - HAL1 LINE L1 -2150 357 272 2059 134 3 10 chr2 65609919 65610224 -185077630 - AluJb SINE Alu -9 303 1 234 259 199 76 chr2 65610224 65610440 -185077414 - HAL1 LINE L1 -2235 272 3 2246 104 0 3 chr2 65610574 65610871 -185076983 + AluSg SINE Alu 1 296 -14 265 220 92 37 chr2 65610880 65610989 -185076865 - L1ME4a LINE L1 -4 6117 6003 278 245 75 0 chr2 65611049 65611143 -185076711 + L1ME4a LINE L1 5965 6065 -56 2481 66 7 0 chr2 65611352 65611657 -185076197 + AluSx SINE Alu 1 307 -5 192 97 0 0 chr2 65613031 65613062 -185074792 + (TA)n Simple_repeat Simple_repeat 1 31 0 693 161 59 0 chr2 65613062 65613180 -185074674 - FLAM_C SINE Alu -8 125 1 797 283 138 34 chr2 65613186 65613700 -185074154 - L1ME4a LINE L1 -298 5823 5256 282 107 18 0 chr2 65613958 65614008 -185073846 + Alu SINE Alu 2 37 -265 915 104 129 25 chr2 65614017 65614180 -185073674 - MER2 DNA MER2_type -165 180 1 2414 76 3 17 chr2 65614540 65614842 -185073012 + AluSp SINE Alu 1 298 -15 541 248 0 81 chr2 65614967 65615027 -185072827 - MIR SINE MIR -106 156 93 2298 84 3 3 chr2 65615027 65615324 -185072530 + AluY SINE Alu 1 297 -14 541 248 0 81 chr2 65615324 65615412 -185072442 - MIR SINE MIR -169 93 20 2196 106 0 0 chr2 65615906 65616252 -185071602 + AluSx SINE Alu 1 346 0 1236 226 30 21 chr2 65616930 65617258 -185070596 - MER46C DNA MER2_type -6 332 2 2168 120 3 0 chr2 65617383 65617675 -185070179 - AluSq SINE Alu -19 294 2 225 0 0 0 chr2 65617747 65617772 -185070082 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 373 200 24 24 chr2 65618042 65618127 -185069727 - L2 LINE L2 0 3272 3188 788 175 0 0 chr2 65618283 65618420 -185069434 + MER5A DNA MER1_type 1 137 -52 2202 120 3 0 chr2 65618435 65618743 -185069111 - AluSx SINE Alu 0 312 4 1672 132 9 71 chr2 65618746 65618929 -185068925 + L1MD1 LINE L1 5922 6078 -164 2597 35 10 13 chr2 65618929 65619239 -185068615 - AluY SINE Alu -2 309 1 1672 132 9 71 chr2 65619239 65619381 -185068473 + L1MD1 LINE L1 6078 6227 -15 3091 257 61 23 chr2 65619573 65620240 -185067614 - L2 LINE L2 -369 2945 2305 1795 173 13 70 chr2 65620240 65620627 -185067227 + MLT1A1 LTR MaLR 1 365 0 3091 257 61 23 chr2 65620627 65620884 -185066970 - L2 LINE L2 -1009 2305 2059 2064 96 0 93 chr2 65620884 65621207 -185066647 + AluY SINE Alu 1 293 -18 3091 257 61 23 chr2 65621207 65621396 -185066458 - L2 LINE L2 -1255 2059 1789 2225 109 7 0 chr2 65621396 65621689 -185066165 + AluSx SINE Alu 1 295 -17 289 209 88 44 chr2 65621696 65621787 -185066067 - MER21B LTR ERV1 -757 106 12 188 343 61 0 chr2 65621867 65621966 -185065888 - L2 LINE L2 -46 3226 3122 359 217 118 81 chr2 65622297 65622458 -185065396 + MIR SINE MIR 46 212 -50 1753 189 68 31 chr2 65622568 65622950 -185064904 + MSTD LTR MaLR 1 396 0 2163 120 3 0 chr2 65623439 65623722 -185064132 - AluSc SINE Alu -25 284 1 2251 105 0 7 chr2 65623725 65624029 -185063825 - AluSg SINE Alu -8 302 1 2234 120 0 83 chr2 65624320 65624662 -185063192 + MER47A DNA MER2_type 1 307 -2016 2476 75 0 28 chr2 65624662 65624982 -185062872 - AluY SINE Alu 0 311 1 2234 120 0 83 chr2 65624982 65625038 -185062816 + MER47A DNA MER2_type 307 366 0 1858 36 0 0 chr2 65625039 65625262 -185062592 + L1PA13 LINE L1 5941 6163 0 25 0 0 0 chr2 65625429 65625454 -185062400 + AT_rich Low_complexity Low_complexity 1 25 0 667 253 37 126 chr2 65625457 65626047 -185061807 + L2 LINE L2 2777 3313 0 202 241 0 17 chr2 65626155 65626213 -185061641 + L2 LINE L2 3256 3312 -1 2302 99 0 3 chr2 65626386 65626679 -185061175 - AluSx SINE Alu -20 292 1 411 280 116 21 chr2 65626840 65627029 -185060825 - MIR SINE MIR -6 256 50 867 226 33 9 chr2 65627313 65627525 -185060329 - MIR SINE MIR -44 218 2 519 213 40 111 chr2 65627910 65628135 -185059719 - MLT1K LTR MaLR 0 588 380 1794 181 0 0 chr2 65628349 65628661 -185059193 + AluJo SINE Alu 1 312 0 518 108 0 65 chr2 65628740 65628765 -185059089 - AluSg/x SINE Alu -7 302 277 4778 86 10 38 chr2 65628765 65628835 -185059019 - L1PA13 LINE L1 -2 6161 6091 261 0 0 0 chr2 65628835 65628864 -185058990 + (TG)n Simple_repeat Simple_repeat 2 30 0 1700 139 12 4 chr2 65628864 65629123 -185058731 - AluSx SINE Alu -27 285 25 4778 86 10 38 chr2 65629123 65629757 -185058097 - L1PA13 LINE L1 -70 6093 5476 518 108 0 65 chr2 65629757 65629824 -185058030 - AluSg/x SINE Alu -32 277 216 1920 78 43 62 chr2 65629824 65629922 -185057932 - L1P4 LINE L1 -584 5579 5481 2268 96 7 0 chr2 65629922 65630213 -185057641 - AluSx SINE Alu -19 293 1 1920 78 43 62 chr2 65630213 65630436 -185057418 - L1P4 LINE L1 -682 5481 5264 357 62 0 0 chr2 65630455 65630503 -185057351 + (TTC)n Simple_repeat Simple_repeat 1 48 0 828 134 0 70 chr2 65630512 65630654 -185057200 - FLAM_C SINE Alu -1 132 1 405 0 0 0 chr2 65630742 65630787 -185057067 + (CA)n Simple_repeat Simple_repeat 2 46 0 2233 112 3 0 chr2 65631052 65631355 -185056499 + AluSx SINE Alu 1 304 -8 950 294 149 7 chr2 65631356 65631799 -185056055 + HAL1 LINE L1 1257 1762 -745 1519 141 0 42 chr2 65632045 65632308 -185055546 - AluJb SINE Alu 0 312 61 405 276 112 12 chr2 65632480 65632650 -185055204 + MIR SINE MIR 21 207 -55 535 248 80 0 chr2 65632669 65632806 -185055048 - MER5B DNA MER1_type -7 171 24 380 219 12 0 chr2 65632906 65632988 -185054866 + MER69 DNA AcHobo 1 83 -2443 218 344 31 10 chr2 65633171 65633267 -185054587 - MIR SINE MIR -98 164 67 477 253 0 0 chr2 65633605 65633696 -185054158 + MER69 DNA AcHobo 44 134 -2392 1370 179 4 36 chr2 65633698 65633977 -185053877 - AluJo SINE Alu -2 310 41 364 264 116 8 chr2 65633989 65634110 -185053744 + MER69 DNA AcHobo 141 274 -952 825 178 0 0 chr2 65634167 65634296 -185053558 - AluJb SINE Alu -183 129 1 1944 119 0 0 chr2 65634375 65634644 -185053210 - AluSx SINE Alu -7 305 37 26 0 0 0 chr2 65634682 65634708 -185053146 + AT_rich Low_complexity Low_complexity 1 26 0 1626 169 3 11 chr2 65634815 65635099 -185052755 - AluJo SINE Alu -18 294 13 2311 90 10 0 chr2 65635099 65635398 -185052456 + AluY SINE Alu 1 303 -8 1648 157 21 11 chr2 65635738 65636053 -185051801 + AluSx SINE Alu 1 318 0 2149 114 0 20 chr2 65636132 65636438 -185051416 - AluSx SINE Alu -12 300 1 578 230 63 11 chr2 65636803 65636977 -185050877 - MIR SINE MIR -14 248 66 22 35 0 0 chr2 65637129 65637158 -185050696 + AT_rich Low_complexity Low_complexity 1 29 0 26 82 0 0 chr2 65637459 65637520 -185050334 + AT_rich Low_complexity Low_complexity 1 61 0 1110 424 20 0 chr2 65637746 65637987 -185049867 + AluY SINE Alu 1 251 -50 1674 105 0 0 chr2 65637987 65638196 -185049658 + AluSq SINE Alu 3 211 -102 1110 424 20 0 chr2 65638196 65638249 -185049605 + AluY SINE Alu 251 301 0 2149 102 0 7 chr2 65639353 65639685 -185048169 - AluSg SINE Alu 0 330 1 2175 118 0 7 chr2 65641154 65641451 -185046403 - AluSc SINE Alu -14 295 1 210 329 13 13 chr2 65641538 65641614 -185046240 - MIR3 SINE MIR -23 185 110 281 325 153 35 chr2 65641651 65642140 -185045714 + L2 LINE L2 2686 3242 -30 183 42 0 0 chr2 65643635 65643659 -185044195 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1992 96 65 0 chr2 65643663 65643924 -185043930 - AluSx SINE Alu -30 282 5 22 0 0 0 chr2 65643980 65644002 -185043852 + AT_rich Low_complexity Low_complexity 1 22 0 2350 89 0 0 chr2 65644363 65644655 -185043199 + AluY SINE Alu 1 292 -19 2091 130 3 10 chr2 65644918 65645225 -185042629 + AluSx SINE Alu 1 305 -7 276 130 0 0 chr2 65645779 65645825 -185042029 + (TG)n Simple_repeat Simple_repeat 1 46 0 2595 67 9 3 chr2 65645825 65646166 -185041688 - L1PA7 LINE L1 -6 6148 5806 1853 136 7 10 chr2 65646191 65646485 -185041369 - AluSx SINE Alu -19 293 1 1415 119 41 9 chr2 65646741 65646959 -185040895 + AluSx SINE Alu 2 226 -86 384 318 60 10 chr2 65646990 65647191 -185040663 + L2 LINE L2 2543 2753 -561 955 157 13 0 chr2 65647191 65647344 -185040510 + FRAM SINE Alu 5 159 -17 451 179 18 11 chr2 65647344 65647519 -185040335 + GA-rich Low_complexity Low_complexity 1 176 0 267 280 84 19 chr2 65647868 65647975 -185039879 + L2 LINE L2 3138 3251 -21 2447 66 13 25 chr2 65647987 65648304 -185039550 + AluSp SINE Alu 1 313 0 1233 92 174 0 chr2 65648327 65648523 -185039331 + L1PA10 LINE L1 5939 6168 0 956 128 8 0 chr2 65648736 65648869 -185038985 + AluJo SINE Alu 1 134 -178 2406 46 0 7 chr2 65649022 65649334 -185038520 + AluY SINE Alu 1 310 0 2722 93 5 8 chr2 65649391 65649767 -185038087 + THE1C LTR MaLR 1 375 0 1788 148 35 66 chr2 65650321 65650698 -185037156 + MLT1A1 LTR MaLR 1 365 0 897 188 111 117 chr2 65650824 65651165 -185036689 + MLT1D LTR MaLR 1 339 -166 654 177 0 9 chr2 65651165 65651278 -185036576 + AluJb SINE Alu 1 112 -200 1644 123 0 0 chr2 65651278 65651525 -185036329 + AluSg SINE Alu 61 307 0 288 0 0 0 chr2 65651631 65651663 -185036191 + (TA)n Simple_repeat Simple_repeat 2 33 0 703 258 137 41 chr2 65652220 65652686 -185035168 - MLT1J LTR MaLR 0 511 1 1957 135 35 3 chr2 65652730 65653018 -185034836 - AluSx SINE Alu -15 297 1 1240 164 129 21 chr2 65653357 65653517 -185034337 - AluJb SINE Alu -2 310 169 180 0 0 0 chr2 65653517 65653537 -185034317 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1240 164 129 21 chr2 65653537 65653656 -185034198 - AluJb SINE Alu -143 169 1 685 174 25 0 chr2 65653675 65653796 -185034058 + L1MB7 LINE L1 5689 5812 -362 290 258 0 81 chr2 65654358 65654482 -185033372 + A-rich Low_complexity Low_complexity 1 114 0 2365 93 10 6 chr2 65656447 65656758 -185031096 + AluSq SINE Alu 2 313 0 1614 175 16 10 chr2 65656859 65657167 -185030687 + L1MB7 LINE L1 5814 6123 -61 1953 145 0 23 chr2 65657209 65657513 -185030341 + AluSx SINE Alu 1 297 -15 2455 180 80 39 chr2 65657521 65657635 -185030219 - L1M4 LINE L1 -4831 1711 1603 1942 110 7 66 chr2 65657635 65657964 -185029890 + AluSq SINE Alu 1 311 0 2455 180 80 39 chr2 65657964 65658497 -185029357 - L1M4 LINE L1 -4939 1603 1035 324 214 179 18 chr2 65658544 65658656 -185029198 + MLT1D LTR MaLR 420 549 0 535 270 21 48 chr2 65658724 65658913 -185028941 + LTR16A1 LTR ERVL 219 402 -55 685 156 16 31 chr2 65658991 65659119 -185028735 + FLAM_C SINE Alu 5 130 -3 2765 140 19 28 chr2 65659119 65659186 -185028668 + ERVL LTR ERVL 4552 4618 -1146 2265 92 0 0 chr2 65659186 65659467 -185028387 - AluSc SINE Alu -13 296 16 2765 140 19 28 chr2 65659467 65659864 -185027990 + ERVL LTR ERVL 4618 5012 -752 789 165 4 0 chr2 65659970 65660241 -185027613 + G-rich Low_complexity Low_complexity 1 272 0 827 144 12 19 chr2 65660241 65660401 -185027453 + AluY SINE Alu 139 297 -14 2393 94 0 3 chr2 65661015 65661324 -185026530 - AluSq SINE Alu -5 308 1 905 135 8 0 chr2 65661325 65661458 -185026396 - AluJo SINE Alu -178 134 1 310 255 97 76 chr2 65661571 65661716 -185026138 - MIR SINE MIR -84 178 31 1906 148 30 7 chr2 65661796 65662094 -185025760 + AluSg SINE Alu 1 305 -5 2225 93 14 0 chr2 65662321 65662610 -185025244 + AluSp SINE Alu 1 293 -20 2399 73 0 29 chr2 65662755 65663070 -185024784 + AluSc SINE Alu 1 306 -3 533 156 125 36 chr2 65663089 65663246 -185024608 + MER41-int LTR ERV1 851 2717 -3229 728 200 7 41 chr2 65664017 65664162 -185023692 - FAM SINE Alu -26 159 20 351 230 71 18 chr2 65664197 65664310 -185023544 - Tigger8 DNA MER2_type -265 401 283 21 0 0 0 chr2 65664977 65664998 -185022856 + AT_rich Low_complexity Low_complexity 1 21 0 527 220 252 28 chr2 65665343 65665557 -185022297 - MIR SINE MIR 0 262 1 432 291 161 9 chr2 65665776 65665999 -185021855 + MIR SINE MIR 2 258 -4 1988 122 3 53 chr2 65666715 65667036 -185020818 - AluJb SINE Alu -7 305 1 2042 92 60 3 chr2 65667202 65667486 -185020368 - AluSq SINE Alu -13 300 1 1735 161 0 61 chr2 65668172 65668483 -185019371 - AluJo SINE Alu -20 292 1 600 88 0 0 chr2 65668798 65668878 -185018976 - AluS SINE Alu -231 82 3 370 255 137 0 chr2 65669126 65669330 -185018524 - L1ME4a LINE L1 -202 5919 5688 21 0 0 0 chr2 65669330 65669351 -185018503 + AT_rich Low_complexity Low_complexity 1 21 0 2226 102 3 3 chr2 65669395 65669689 -185018165 - AluSx SINE Alu -16 296 3 1965 131 27 10 chr2 65669972 65670269 -185017585 - AluJo SINE Alu -10 302 1 814 218 32 0 chr2 65670269 65670425 -185017429 - FRAM SINE Alu -15 161 1 2157 116 17 0 chr2 65670600 65670894 -185016960 + AluSg SINE Alu 1 299 -11 387 0 0 0 chr2 65671232 65671275 -185016579 + (CA)n Simple_repeat Simple_repeat 2 44 0 2081 122 10 3 chr2 65671935 65672229 -185015625 + AluSq SINE Alu 1 296 -17 2317 94 19 7 chr2 65672271 65672580 -185015274 - AluSq SINE Alu 0 313 1 180 296 56 0 chr2 65673465 65673519 -185014335 - L2 LINE L2 -31 3241 3185 1478 132 13 0 chr2 65673522 65673750 -185014104 + LTR39 LTR ERV1 1 231 -552 2149 135 3 0 chr2 65674253 65674557 -185013297 + AluSg SINE Alu 1 305 -5 237 121 0 0 chr2 65674559 65674592 -185013262 + AluSx SINE Alu 1 33 -269 4295 66 0 7 chr2 65674593 65675136 -185012718 - MER41A LTR ERV1 0 554 16 1799 146 0 0 chr2 65675139 65675400 -185012454 + AluSx SINE Alu 18 278 -34 1058 85 23 11 chr2 65675402 65675579 -185012275 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 3408 140 30 36 chr2 65675600 65676006 -185011848 + LTR39 LTR ERV1 211 613 -170 1831 124 0 0 chr2 65676006 65676265 -185011589 + AluSx SINE Alu 46 304 -8 3408 140 30 36 chr2 65676265 65676435 -185011419 + LTR39 LTR ERV1 613 783 0 294 319 51 19 chr2 65676497 65676654 -185011200 + MARNA DNA Mariner 174 335 -251 1961 155 0 19 chr2 65676663 65676972 -185010882 + AluSx SINE Alu 1 303 -9 2624 64 0 0 chr2 65677411 65677722 -185010132 - AluY SINE Alu 0 311 1 242 265 20 71 chr2 65678333 65678364 -185009490 - Charlie8 DNA MER1_type -103 227 196 2086 143 0 3 chr2 65678364 65678671 -185009183 - AluJb SINE Alu -6 306 1 242 265 20 71 chr2 65678671 65678737 -185009117 - Charlie8 DNA MER1_type -134 196 135 434 206 28 0 chr2 65678740 65678847 -185009007 - LTR16C LTR ERVL 0 491 382 2212 114 0 0 chr2 65679005 65679302 -185008552 - AluY SINE Alu -14 297 1 2126 98 14 0 chr2 65679612 65679897 -185007957 - AluSx SINE Alu -20 292 4 950 257 74 12 chr2 65679904 65680242 -185007612 + L2 LINE L2 1991 2349 -965 772 258 37 109 chr2 65680272 65680346 -185007508 - LTR16C LTR ERVL -3 488 410 1460 226 51 85 chr2 65680346 65680911 -185006943 + MLT1H LTR MaLR 4 549 0 772 258 37 109 chr2 65680911 65681179 -185006675 - LTR16C LTR ERVL -81 410 181 2405 100 0 3 chr2 65681179 65681488 -185006366 - AluSp SINE Alu -5 308 1 772 258 37 109 chr2 65681488 65681575 -185006279 - LTR16C LTR ERVL -310 181 89 893 252 216 7 chr2 65681709 65681928 -185005926 + L2 LINE L2 2395 2567 -746 1921 157 13 17 chr2 65681928 65682092 -185005762 - AluJo SINE Alu -14 298 135 188 33 0 33 chr2 65682092 65682122 -185005732 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2009 129 4 0 chr2 65682122 65682401 -185005453 - AluSx SINE Alu -32 280 1 1921 157 13 17 chr2 65682401 65682534 -185005320 - AluJo SINE Alu -175 137 1 893 252 216 7 chr2 65682534 65683037 -185004817 + L2 LINE L2 2567 3259 -54 2344 111 0 0 chr2 65683170 65683477 -185004377 + AluSq SINE Alu 3 309 -4 2364 66 24 0 chr2 65683516 65683805 -185004049 + AluY SINE Alu 1 296 -15 1759 139 23 58 chr2 65683900 65684032 -185003822 + AluJo SINE Alu 13 148 -164 1752 135 0 26 chr2 65684032 65684298 -185003556 + AluSg SINE Alu 45 303 -7 1759 139 23 58 chr2 65684298 65684475 -185003379 + AluJo SINE Alu 148 311 -1 262 253 48 0 chr2 65684555 65684638 -185003216 - L2 LINE L2 -2 3270 3184 1332 173 0 0 chr2 65685232 65685434 -185002420 + AluJb SINE Alu 73 274 -38 892 176 36 12 chr2 65685443 65685608 -185002246 + MER49 LTR ERV1 653 821 -102 2376 106 3 0 chr2 65686266 65686577 -185001277 - AluSx SINE Alu 0 312 1 1858 131 19 42 chr2 65687179 65687492 -185000362 - AluJo SINE Alu -6 306 1 1443 225 141 9 chr2 65687748 65688273 -184999581 + Charlie7 DNA MER1_type 77 670 -1942 576 213 16 0 chr2 65688284 65688411 -184999443 + Charlie7 DNA MER1_type 2196 2324 -288 1717 160 35 3 chr2 65688411 65688699 -184999155 + AluJo SINE Alu 1 297 -15 3035 243 41 23 chr2 65688738 65688791 -184999063 + L1MC4 LINE L1 6727 6778 -1264 2210 96 27 0 chr2 65688791 65689083 -184998771 - AluSq SINE Alu -13 300 1 3035 243 41 23 chr2 65689083 65689933 -184997921 + L1MC4 LINE L1 6778 7646 -396 1669 138 8 22 chr2 65689933 65690201 -184997653 + AluJb SINE Alu 30 293 -19 706 214 60 63 chr2 65691302 65691554 -184996300 + L1MC5 LINE L1 7611 7861 -100 2352 95 3 0 chr2 65691773 65692077 -184995777 - AluSg SINE Alu -5 305 1 813 185 0 0 chr2 65692325 65692455 -184995399 - FLAM_C SINE Alu 0 133 4 2200 133 3 0 chr2 65692485 65692794 -184995060 - AluSx SINE Alu -1 311 2 861 124 0 8 chr2 65692875 65692996 -184994858 + FLAM_C SINE Alu 1 120 -13 33 0 0 0 chr2 65692996 65693029 -184994825 + AT_rich Low_complexity Low_complexity 1 33 0 2085 127 3 13 chr2 65693315 65693614 -184994240 - AluSq SINE Alu -15 298 3 405 233 4 7 chr2 65693779 65694018 -184993836 + C-rich Low_complexity Low_complexity 1 287 0 216 0 0 0 chr2 65694126 65694150 -184993704 + (TA)n Simple_repeat Simple_repeat 2 25 0 1689 166 18 4 chr2 65694150 65694427 -184993427 - AluJb SINE Alu -29 283 3 2182 64 0 43 chr2 65694787 65695067 -184992787 - AluY SINE Alu -9 302 35 191 365 0 0 chr2 65695303 65695388 -184992466 - MIR SINE MIR -55 207 123 186 342 40 26 chr2 65695621 65695697 -184992157 - L2 LINE L2 -3 3310 3234 2581 71 0 0 chr2 65696390 65696699 -184991155 - AluY SINE Alu -1 310 2 2677 47 0 0 chr2 65698092 65698393 -184989461 + AluY SINE Alu 1 301 -10 1711 177 26 132 chr2 65698442 65698974 -184988880 + L1ME3A LINE L1 5600 6075 -95 2096 139 3 0 chr2 65699090 65699391 -184988463 - AluJb SINE Alu -10 302 1 224 257 154 103 chr2 65699825 65699961 -184987893 - MIR3 SINE MIR -27 181 39 2464 85 0 10 chr2 65701162 65701468 -184986386 + AluSx SINE Alu 1 303 -9 519 134 24 12 chr2 65701483 65701565 -184986289 - AluJ/FLAM SINE Alu -224 88 6 2207 116 0 10 chr2 65701592 65701894 -184985960 + AluSg SINE Alu 1 299 -11 365 316 220 0 chr2 65702376 65702553 -184985301 + MIR SINE MIR 37 252 -10 670 196 221 42 chr2 65702560 65702725 -184985129 + HAL1 LINE L1 793 927 -1580 1767 179 7 10 chr2 65702725 65703066 -184984788 + AluJb SINE Alu 1 312 0 670 196 221 42 chr2 65703066 65703212 -184984642 + HAL1 LINE L1 927 1160 -1347 573 258 101 94 chr2 65703268 65703324 -184984530 + HAL1 LINE L1 1798 1852 -655 1844 134 61 81 chr2 65703324 65703668 -184984186 + MER1B DNA MER1_type 1 337 0 573 258 101 94 chr2 65703668 65703906 -184983948 + HAL1 LINE L1 1852 2087 -420 2296 102 0 10 chr2 65703906 65704211 -184983643 + AluSg SINE Alu 1 302 -8 573 258 101 94 chr2 65704211 65704469 -184983385 + HAL1 LINE L1 2087 2355 -152 296 164 18 0 chr2 65704455 65704510 -184983344 + L1M4 LINE L1 5434 5489 -695 * 1626 171 25 0 chr2 65704511 65704792 -184983062 + AluJo SINE Alu 1 288 -24 3102 116 9 20 chr2 65704835 65705229 -184982625 + L1PA16 LINE L1 5710 6083 -83 2212 117 0 13 chr2 65705229 65705529 -184982325 - AluSq SINE Alu -16 297 2 3102 116 9 20 chr2 65705529 65705613 -184982241 + L1PA16 LINE L1 6083 6166 0 799 189 0 0 chr2 65706470 65706592 -184981262 - FLAM_A SINE Alu -11 122 1 23 0 0 0 chr2 65707308 65707331 -184980523 + AT_rich Low_complexity Low_complexity 1 23 0 2073 124 7 7 chr2 65707346 65707637 -184980217 - AluSx SINE Alu -21 291 1 1723 174 3 10 chr2 65707643 65707931 -184979923 - AluJo SINE Alu -26 286 1 231 36 0 0 chr2 65808516 65808544 -184879310 + (CACCC)n Simple_repeat Simple_repeat 4 31 0 1816 121 4 0 chr2 65810776 65811033 -184876821 + AluSp SINE Alu 34 291 -22 620 263 180 7 chr2 65812103 65812392 -184875462 - L2 LINE L2 -338 2976 2638 221 300 17 0 chr2 65812755 65812815 -184875039 + L2 LINE L2 2999 3059 -254 255 317 59 10 chr2 65814004 65814105 -184873749 - MIR SINE MIR -35 227 122 265 261 116 0 chr2 65814153 65814222 -184873632 - MIR SINE MIR -137 125 49 504 181 107 139 chr2 65814225 65814506 -184873348 + L1ME3 LINE L1 5891 6162 0 2169 107 0 0 chr2 65815830 65816128 -184871726 + AluSg SINE Alu 1 298 -12 391 298 84 37 chr2 65816646 65816837 -184871017 - MIR SINE MIR -3 259 60 235 193 0 60 chr2 65817649 65817732 -184870122 + (CCCCG)n Simple_repeat Simple_repeat 2 79 0 244 223 140 45 chr2 65819110 65819267 -184868587 + L1ME4a LINE L1 5945 6116 -5 2117 87 28 3 chr2 65819329 65819618 -184868236 + AluSg SINE Alu 1 296 -14 2127 96 0 7 chr2 65819995 65820286 -184867568 + AluSx SINE Alu 1 289 -23 529 236 94 0 chr2 65820452 65820579 -184867275 - L2 LINE L2 0 3272 3134 1224 278 172 103 chr2 65820674 65821384 -184866470 - L2 LINE L2 -433 2881 2222 2163 91 30 0 chr2 65821384 65821681 -184866173 + AluSx SINE Alu 1 306 -6 1224 278 172 103 chr2 65821681 65821786 -184866068 - L2 LINE L2 -1092 2222 2126 662 124 31 0 chr2 65821786 65821883 -184865971 + FLAM_A SINE Alu 11 110 -32 1224 278 172 103 chr2 65821883 65821906 -184865948 - L2 LINE L2 -1188 2126 2106 2350 87 3 0 chr2 65821906 65822216 -184865638 + AluY SINE Alu 1 311 0 1224 278 172 103 chr2 65822216 65823443 -184864411 - L2 LINE L2 -1208 2106 567 426 186 0 0 chr2 65823867 65823953 -184863901 + CT-rich Low_complexity Low_complexity 1 86 0 1712 150 0 0 chr2 65823953 65824213 -184863641 - AluSx SINE Alu -52 260 1 1023 213 85 22 chr2 65826396 65826691 -184861163 + L1ME2 LINE L1 5816 6131 -33 21 0 0 0 chr2 65826699 65826720 -184861134 + AT_rich Low_complexity Low_complexity 1 21 0 249 175 70 0 chr2 65826723 65826780 -184861074 + L1ME2 LINE L1 6104 6164 0 472 252 15 8 chr2 65827623 65827754 -184860100 - MLT1L LTR MaLR -340 275 144 1308 266 45 26 chr2 65827863 65828288 -184859566 - LTR16A LTR ERVL 0 450 18 772 218 109 74 chr2 65829497 65829781 -184858073 + MER46C DNA MER2_type 1 294 -44 1447 250 39 12 chr2 65830030 65830446 -184857408 - L1ME LINE L1 -475 5687 5261 254 278 0 61 chr2 65830476 65830591 -184857263 - L1MC4 LINE L1 -1329 6713 6606 588 138 32 11 chr2 65830597 65830691 -184857163 - AluSg1 SINE Alu -213 96 1 890 302 53 32 chr2 65830718 65830973 -184856881 - L2 LINE L2 -814 2500 2252 1027 253 70 49 chr2 65830973 65831361 -184856493 - MSTD LTR MaLR 0 396 1 225 0 0 0 chr2 65831370 65831395 -184856459 + (CA)n Simple_repeat Simple_repeat 2 26 0 890 302 53 32 chr2 65831395 65831623 -184856231 - L2 LINE L2 -1069 2245 1997 264 59 0 0 chr2 65832132 65832166 -184855688 + (TTC)n Simple_repeat Simple_repeat 3 36 0 357 226 0 3 chr2 65832166 65832241 -184855613 - AluJ/FLAM SINE Alu -242 60 1 316 335 48 24 chr2 65832254 65832421 -184855433 - MIR3 SINE MIR -18 190 20 1564 175 4 7 chr2 65832688 65832962 -184854892 - AluJo SINE Alu -8 304 32 657 128 9 0 chr2 65833028 65833137 -184854717 + FRAM SINE Alu 66 175 -1 2357 94 0 0 chr2 65833555 65833864 -184853990 + AluSg SINE Alu 1 309 -1 203 341 45 11 chr2 65833942 65834030 -184853824 + L2 LINE L2 3182 3272 0 188 280 217 35 chr2 65835920 65836063 -184851791 + L2 LINE L2 3094 3262 -10 559 262 115 16 chr2 65836305 65836488 -184851366 + LTR33 LTR ERVL 2 202 -319 257 214 57 29 chr2 65836598 65836668 -184851186 + LTR33 LTR ERVL 448 519 -2 2322 64 6 29 chr2 65838099 65838412 -184849442 - AluSq SINE Alu -7 306 1 24 0 0 0 chr2 65838421 65838445 -184849409 + AT_rich Low_complexity Low_complexity 1 24 0 2021 123 14 0 chr2 65838469 65838761 -184849093 - AluSq SINE Alu -16 297 2 321 254 31 31 chr2 65838773 65838903 -184848951 + L1MD3 LINE L1 5853 5982 -1826 432 192 8 108 chr2 65839089 65839209 -184848645 + L1MD3 LINE L1 6127 7985 -8 1977 128 23 3 chr2 65839254 65839560 -184848294 - AluSx SINE Alu 0 312 1 254 135 19 0 chr2 65840137 65840189 -184847665 - L1MD2 LINE L1 -17 6342 6290 261 281 18 30 chr2 65840189 65840263 -184847591 + L1 LINE L1 3009 3082 -3064 2293 81 0 0 chr2 65840263 65840560 -184847294 + AluSg1 SINE Alu 1 297 -12 261 281 18 30 chr2 65840560 65840652 -184847202 + L1 LINE L1 3082 3173 -2973 816 174 0 21 chr2 65840655 65840799 -184847055 + FLAM_C SINE Alu 3 143 0 685 259 71 1 chr2 65840799 65841070 -184846784 + L1 LINE L1 3144 3434 -2712 3515 175 43 19 chr2 65841070 65841812 -184846042 + L1MB7 LINE L1 5406 6165 -19 685 259 71 1 chr2 65841812 65841832 -184846022 + L1 LINE L1 3434 3451 -2695 1484 204 81 14 chr2 65841849 65842207 -184845647 - L1MD2 LINE L1 -59 6300 5919 1794 163 0 0 chr2 65842218 65842513 -184845341 + AluSx SINE Alu 1 295 -17 1711 124 55 17 chr2 65842826 65843116 -184844738 + AluJo SINE Alu 1 301 -11 297 255 21 0 chr2 65843122 65843216 -184844638 + L1PA15 LINE L1 5794 5889 -277 1265 205 38 80 chr2 65843229 65843290 -184844564 - LTR10A LTR ERV1 -61 548 486 2187 85 3 0 chr2 65843290 65843598 -184844256 - AluSp SINE Alu 0 309 1 1265 205 38 80 chr2 65843598 65843960 -184843894 - LTR10A LTR ERV1 -123 486 142 1651 140 7 41 chr2 65844129 65844286 -184843568 + L1PA15 LINE L1 5881 6025 -140 2108 104 3 0 chr2 65844286 65844583 -184843271 + AluSx SINE Alu 3 300 -12 1651 140 7 41 chr2 65844583 65844717 -184843137 + L1PA15 LINE L1 6025 6162 -3 4933 148 83 164 chr2 65844994 65845312 -184842542 - L1MC3 LINE L1 -2 7783 7441 2126 102 0 3 chr2 65845312 65845616 -184842238 - AluSg SINE Alu -7 303 1 1055 61 0 8 chr2 65845616 65845748 -184842106 - AluSg1 SINE Alu -176 133 3 4933 148 83 164 chr2 65845748 65845901 -184841953 - L1MC3 LINE L1 -343 7442 7278 1801 114 19 57 chr2 65845901 65846216 -184841638 - AluSx SINE Alu -9 303 1 4933 148 83 164 chr2 65846216 65846317 -184841537 - L1MC3 LINE L1 -507 7278 7170 283 337 0 0 chr2 65846317 65846409 -184841445 - MLT1F1 LTR MaLR -443 124 33 4933 148 83 164 chr2 65846409 65847299 -184840555 - L1MC3 LINE L1 -615 7170 6232 930 176 6 11 chr2 65847312 65847488 -184840366 - FRAM SINE Alu -1 175 1 585 220 22 78 chr2 65847488 65847610 -184840244 - L1MC3 LINE L1 -1539 6246 6142 2264 103 0 7 chr2 65847610 65847920 -184839934 + AluSx SINE Alu 1 308 -4 585 220 22 78 chr2 65847920 65848029 -184839825 - L1MC3 LINE L1 -1643 6142 6028 210 308 26 43 chr2 65848057 65848174 -184839680 - L2 LINE L2 -1341 1973 1859 1674 191 0 0 chr2 65849569 65849878 -184837976 + AluJo SINE Alu 1 309 -3 218 203 0 16 chr2 65850029 65850093 -184837761 + CT-rich Low_complexity Low_complexity 1 63 0 2008 122 3 0 chr2 65850097 65850385 -184837469 - AluSx SINE Alu -23 289 1 753 154 0 23 chr2 65850781 65850911 -184836943 + FLAM_C SINE Alu 5 131 -2 1567 156 76 3 chr2 65851143 65851431 -184836423 + AluJo SINE Alu 1 309 -3 2084 95 30 0 chr2 65851536 65851831 -184836023 + AluSx SINE Alu 1 304 -8 1983 134 7 3 chr2 65852774 65853081 -184834773 + AluJb SINE Alu 1 308 -4 1578 164 0 11 chr2 65853089 65853369 -184834485 + AluJb SINE Alu 6 282 -30 324 0 0 0 chr2 65853370 65853406 -184834448 + (CA)n Simple_repeat Simple_repeat 1 36 0 323 330 67 0 chr2 65855134 65855289 -184832565 + MIR3 SINE MIR 10 175 -67 2209 99 3 0 chr2 65855324 65855644 -184832210 + AluSx SINE Alu 3 323 0 2020 149 0 16 chr2 65855826 65856164 -184831690 - AluSx SINE Alu 0 312 1 1777 157 17 10 chr2 65857289 65857589 -184830265 + AluJo SINE Alu 1 302 -10 2023 138 10 0 chr2 65858035 65858325 -184829529 - AluSx SINE Alu -19 293 1 1270 171 84 13 chr2 65858736 65858975 -184828879 - AluJb SINE Alu -26 286 31 4377 87 155 70 chr2 65858975 65859736 -184828118 - LTR12 LTR ERV1 0 826 1 660 216 116 12 chr2 65859815 65860074 -184827780 - pTR5 LTR ERV1 -1410 1028 743 21 0 0 0 chr2 65862151 65862172 -184825682 + AT_rich Low_complexity Low_complexity 1 21 0 2104 173 84 81 chr2 65862265 65862866 -184824988 - LTR8A LTR ERV1 0 727 153 983 128 0 0 chr2 65862884 65863017 -184824837 - AluSq/x SINE Alu -179 133 1 796 172 65 59 chr2 65863019 65863046 -184824808 - LTR8 LTR ERV1 -521 170 145 2331 95 3 0 chr2 65863046 65863352 -184824502 - AluSx SINE Alu -5 307 1 796 172 65 59 chr2 65863352 65863493 -184824361 - LTR8 LTR ERV1 -546 145 1 188 306 0 32 chr2 65864355 65864417 -184823437 - L2 LINE L2 -80 3192 3133 3306 153 34 57 chr2 65864481 65864769 -184823085 + MER7C DNA MER2_type 1 294 -2734 2039 130 37 0 chr2 65864769 65865068 -184822786 - AluSg SINE Alu 0 310 1 3306 153 34 57 chr2 65865068 65865395 -184822459 + MER7C DNA MER2_type 294 602 0 2431 55 3 19 chr2 65865494 65865802 -184822052 - AluY SINE Alu -8 303 1 1201 134 37 0 chr2 65866731 65866918 -184820936 + MER20 DNA MER1_type 26 219 0 277 323 177 8 chr2 65867369 65867493 -184820361 - MER5A DNA MER1_type 0 189 45 24 53 0 0 chr2 65867592 65867630 -184820224 + AT_rich Low_complexity Low_complexity 1 38 0 32 0 0 0 chr2 65868459 65868491 -184819363 + AT_rich Low_complexity Low_complexity 1 32 0 385 187 13 0 chr2 65869409 65869484 -184818370 - MLT1J LTR MaLR 0 511 436 1006 128 0 0 chr2 65869484 65869625 -184818229 + AluJb SINE Alu 1 141 -171 30 45 0 0 chr2 65869638 65869682 -184818172 + AT_rich Low_complexity Low_complexity 1 44 0 326 75 0 0 chr2 65869685 65869725 -184818129 - MLT1J LTR MaLR -70 441 402 1837 138 26 40 chr2 65870107 65870411 -184817443 + AluJb SINE Alu 1 300 -12 4129 168 43 37 chr2 65871151 65872186 -184815668 + L1PB4 LINE L1 5115 6154 -2 17857 74 61 8 chr2 65872198 65874593 -184813261 + Charlie3 DNA MER1_type 186 2706 -4 438 274 61 6 chr2 65874672 65874836 -184813018 - L1MEc LINE L1 -2300 3829 3657 * 1271 203 29 144 chr2 65874806 65874890 -184812964 - L1MEc LINE L1 -3129 3000 2908 1608 141 77 30 chr2 65874890 65875187 -184812667 - AluJo SINE Alu -1 311 1 1271 203 29 144 chr2 65875187 65875693 -184812161 - L1MEc LINE L1 -3221 2908 2478 478 235 0 10 chr2 65875695 65875797 -184812057 - FLAM_C SINE Alu -4 139 39 1551 161 150 0 chr2 65875809 65876063 -184811791 + AluJb SINE Alu 1 292 -10 2247 109 10 0 chr2 65876089 65876393 -184811461 - AluSp SINE Alu -6 307 1 461 186 90 48 chr2 65876412 65876472 -184811382 - L1MEc LINE L1 -3670 2459 2403 1568 157 43 40 chr2 65876472 65876771 -184811083 - AluJo SINE Alu -12 300 1 461 186 90 48 chr2 65876771 65876855 -184810999 - L1MEc LINE L1 -3726 2403 2309 824 143 8 0 chr2 65876904 65877030 -184810824 - FAM SINE Alu -41 144 18 1024 275 144 45 chr2 65877136 65877363 -184810491 - L1MEc LINE L1 -3966 2163 1960 1989 150 0 7 chr2 65877363 65877669 -184810185 + AluJb SINE Alu 2 305 -7 1024 275 144 45 chr2 65877669 65878150 -184809704 - L1MEc LINE L1 -4169 1960 1385 * 1659 260 48 31 chr2 65878134 65878841 -184809013 - L1MEc LINE L1 -4982 1137 419 2121 83 0 18 chr2 65878861 65879138 -184808716 - AluY SINE Alu -2 309 38 183 100 0 0 chr2 65879300 65879330 -184808524 + (A)n Simple_repeat Simple_repeat 1 30 0 513 249 24 25 chr2 65879348 65879484 -184808370 + MIR SINE MIR 10 143 -65 2410 84 0 3 chr2 65879532 65879843 -184808011 - AluSq SINE Alu -3 310 1 876 154 0 0 chr2 65880103 65880233 -184807621 + AluJ SINE Alu 1 130 -172 2226 89 4 0 chr2 65880252 65880564 -184807290 + AluSg SINE Alu 1 313 0 525 181 0 0 chr2 65880564 65880647 -184807207 + AluJ SINE Alu 134 216 -96 1316 76 0 0 chr2 65880647 65880805 -184807049 - AluY SINE Alu -153 158 1 1092 194 65 0 chr2 65881148 65881184 -184806670 + AluJb SINE Alu 85 117 -195 270 0 0 0 chr2 65881184 65881214 -184806640 + (TA)n Simple_repeat Simple_repeat 2 31 0 1092 194 65 0 chr2 65881214 65881378 -184806476 + AluJb SINE Alu 117 298 -14 445 154 34 94 chr2 65881380 65881475 -184806379 - L1MEc LINE L1 -5297 822 738 2066 137 3 10 chr2 65881475 65881789 -184806065 - AluSx SINE Alu 0 312 1 445 154 34 94 chr2 65881789 65881842 -184806012 - L1MEc LINE L1 -5381 738 683 377 346 22 15 chr2 65881867 65882003 -184805851 - L1MEc LINE L1 -5734 385 249 264 243 146 10 chr2 65882004 65882107 -184805747 - L1MEc LINE L1 -5944 175 59 1840 148 0 34 chr2 65882201 65882499 -184805355 + AluJb SINE Alu 2 289 -23 1484 171 96 4 chr2 65882654 65882935 -184804919 - AluJo SINE Alu -5 307 1 1763 80 129 8 chr2 65883752 65884016 -184803838 - AluSg1 SINE Alu -13 296 1 2129 130 0 0 chr2 65884041 65884341 -184803513 - AluSx SINE Alu -12 300 1 1181 117 0 6 chr2 65884394 65884565 -184803289 + AluSp SINE Alu 137 306 -7 1706 183 25 9 chr2 65884794 65885117 -184802737 - MER39 LTR ERV1 -40 667 340 461 195 124 44 chr2 65885119 65885232 -184802622 - MER39 LTR ERV1 -616 91 1 950 226 45 113 chr2 65885404 65885829 -184802025 + L1M4 LINE L1 4783 5178 -968 1947 103 12 66 chr2 65885937 65886256 -184801598 - AluSc SINE Alu -6 303 2 964 135 0 0 chr2 65886480 65886613 -184801241 - FLAM_C SINE Alu 0 133 1 690 214 49 80 chr2 65887277 65887500 -184800354 - MER21B LTR ERV1 -152 711 496 489 214 0 0 chr2 65887500 65887589 -184800265 - MER8 DNA MER2_type 0 239 151 1779 165 34 7 chr2 65887590 65887881 -184799973 + AluJo SINE Alu 1 299 -13 4052 142 24 19 chr2 65887942 65888064 -184799790 - MER41B LTR ERV1 0 635 515 2133 144 0 3 chr2 65888064 65888376 -184799478 + AluSx SINE Alu 1 311 -1 4052 142 24 19 chr2 65888376 65888885 -184798969 - MER41B LTR ERV1 -120 515 1 27 29 0 0 chr2 65888952 65888986 -184798868 + AT_rich Low_complexity Low_complexity 1 34 0 1714 156 16 36 chr2 65888990 65889298 -184798556 + MER49 LTR ERV1 1 302 -621 507 163 0 51 chr2 65889318 65889449 -184798405 + MER4D LTR ERV1 97 334 -568 2123 218 63 47 chr2 65889483 65890357 -184797497 + MER52A LTR ERV1 667 1696 -59 2598 156 54 85 chr2 65890437 65891014 -184796840 + MER4D LTR ERV1 306 864 -39 2068 123 7 0 chr2 65891015 65891307 -184796547 - AluSq SINE Alu -13 300 7 898 222 34 152 chr2 65891377 65891876 -184795978 - MER21B LTR ERV1 -418 445 6 2308 108 3 0 chr2 65892200 65892505 -184795349 - AluSq SINE Alu -7 306 1 568 258 81 36 chr2 65892509 65892730 -184795124 + MER102b DNA MER1_type 64 294 -47 185 326 87 65 chr2 65892853 65892991 -184794863 - MIR SINE MIR -87 175 35 205 219 31 78 chr2 65893461 65893525 -184794329 - L2 LINE L2 -1 3312 3252 2055 129 3 0 chr2 65893780 65894075 -184793779 + AluSq SINE Alu 1 296 -17 1951 149 3 0 chr2 65894165 65894454 -184793400 + AluJb SINE Alu 1 290 -22 2410 114 39 98 chr2 65894947 65895309 -184792545 - MER4B LTR ERV1 -3 763 381 1898 101 0 0 chr2 65895309 65895556 -184792298 + AluY SINE Alu 1 247 -64 2410 114 39 98 chr2 65895556 65895587 -184792267 - MER4B LTR ERV1 -385 381 350 2387 94 0 3 chr2 65895587 65895896 -184791958 + AluSg SINE Alu 1 308 -2 2201 103 0 32 chr2 65895902 65896213 -184791641 + AluSg SINE Alu 1 301 -9 2410 114 39 98 chr2 65896213 65896411 -184791443 - MER4B LTR ERV1 -421 345 69 3458 116 93 0 chr2 65896411 65896918 -184790936 - MER41C LTR ERV1 0 554 1 2410 114 39 98 chr2 65896918 65896984 -184790870 - MER4B LTR ERV1 -697 69 1 883 166 0 0 chr2 65897486 65897625 -184790229 + FLAM_C SINE Alu 1 139 -4 513 299 82 71 chr2 65898102 65898569 -184789285 - L1MC4a LINE L1 -475 5646 5462 2376 78 10 0 chr2 65898569 65898865 -184788989 - AluSp SINE Alu -14 299 1 513 299 82 71 chr2 65898865 65899072 -184788782 - L1MC4a LINE L1 -659 5462 5259 1625 77 0 0 chr2 65899895 65900089 -184787765 + AluSg SINE Alu 1 194 -116 1797 171 0 23 chr2 65900292 65900597 -184787257 + AluJo SINE Alu 1 298 -14 760 239 22 27 chr2 65900603 65900787 -184787067 - MER58A DNA MER1_type -33 191 9 255 79 0 0 chr2 65900833 65900871 -184786983 + (TC)n Simple_repeat Simple_repeat 1 38 0 303 243 93 9 chr2 65900925 65901032 -184786822 - L1MC5 LINE L1 -571 7390 7275 2270 138 66 47 chr2 65901484 65901910 -184785944 - Tigger2a DNA MER2_type 0 434 1 2328 98 0 0 chr2 65902537 65902832 -184785022 - AluY SINE Alu -16 295 1 1539 142 6 125 chr2 65902871 65903013 -184784841 + AluJb SINE Alu 1 81 -231 2329 43 11 7 chr2 65903013 65903318 -184784536 + AluY SINE Alu 1 306 0 1539 142 6 125 chr2 65903318 65903518 -184784336 + AluJb SINE Alu 81 303 -9 2359 63 0 7 chr2 65903543 65903843 -184784011 + AluY SINE Alu 1 298 -13 1688 125 114 14 chr2 65904157 65904438 -184783416 - AluSg1 SINE Alu 0 309 1 2115 129 0 3 chr2 65904783 65905078 -184782776 + AluSq SINE Alu 5 298 -15 4560 117 38 57 chr2 65906028 65906592 -184781262 - MER4E LTR ERV1 0 779 233 2235 111 13 0 chr2 65906592 65906898 -184780956 - AluSx SINE Alu -2 310 1 4560 117 38 57 chr2 65906898 65907126 -184780728 - MER4E LTR ERV1 -546 233 2 742 314 79 70 chr2 65909792 65910522 -184777332 - MER89-int LTR ERV1 -1634 5167 2137 449 306 80 82 chr2 65911087 65911747 -184776107 - MER89-int LTR ERV1 -2918 3883 3225 271 297 0 11 chr2 65913119 65913210 -184774644 + (TA)n Simple_repeat Simple_repeat 2 91 0 232 204 0 0 chr2 65913210 65913264 -184774590 + LTR66 LTR ERVL 386 439 -171 620 179 120 0 chr2 65915613 65915730 -184772124 - FLAM_C SINE Alu -2 131 1 1290 157 5 23 chr2 65916222 65916438 -184771416 - AluSg/x SINE Alu -14 298 87 1898 138 11 52 chr2 65916550 65916899 -184770955 - MER1B DNA MER1_type -2 335 1 210 143 0 0 chr2 65917242 65917277 -184770577 + (TTCC)n Simple_repeat Simple_repeat 1 35 0 808 116 87 36 chr2 65918054 65918192 -184769662 - AluSg/x SINE Alu -37 273 129 256 259 104 0 chr2 65918326 65918433 -184769421 + MIR3 SINE MIR 57 174 -34 529 168 20 20 chr2 65918538 65918639 -184769215 + FLAM_A SINE Alu 1 101 -41 2175 110 3 3 chr2 65919527 65919817 -184768037 + AluSx SINE Alu 1 290 -22 1845 148 7 7 chr2 65920118 65920396 -184767458 + AluJb SINE Alu 5 282 -30 835 143 295 19 chr2 65921078 65921336 -184766518 + LTR41 LTR ERVL 1 329 -444 305 248 44 9 chr2 65921796 65921909 -184765945 + LTR41 LTR ERVL 651 767 -6 1058 139 93 16 chr2 65922154 65922348 -184765506 + AluJb SINE Alu 86 294 -18 540 220 17 0 chr2 65923740 65923858 -184763996 - MIR SINE MIR -111 151 32 1852 160 13 16 chr2 65925437 65925744 -184762110 - AluJo SINE Alu -6 306 1 186 333 16 0 chr2 65925965 65926028 -184761826 + MIR SINE MIR 33 96 -166 502 217 11 101 chr2 65926299 65926488 -184761366 + MIR SINE MIR 6 177 -85 273 242 75 50 chr2 65927677 65927797 -184760057 + MIR SINE MIR 21 143 -65 1400 129 161 20 chr2 65928365 65928620 -184759234 - AluSx SINE Alu -11 291 1 1351 188 157 91 chr2 65928838 65929385 -184758469 - LTR8A LTR ERV1 -144 583 1 2093 199 51 27 chr2 65930304 65930817 -184757037 - MER4E-int LTR ERV1 -3377 3714 129 1607 80 33 9 chr2 65931603 65931815 -184756039 - AluSg/x SINE Alu -4 308 92 352 91 0 0 chr2 65931815 65931859 -184755995 - Alu SINE Alu -258 44 1 4959 130 18 43 chr2 65932940 65933772 -184754082 - MER4E-int LTR ERV1 -5947 811 1 5032 101 18 55 chr2 65933777 65934576 -184753278 - MER4E LTR ERV1 -10 769 1 400 241 217 30 chr2 65934598 65934764 -184753090 - MER21B LTR ERV1 -54 809 613 1853 160 4 4 chr2 65934776 65935057 -184752797 + AluJo SINE Alu 2 282 -30 1898 235 22 14 chr2 65935196 65935613 -184752241 - MER21B LTR ERV1 -443 420 1 4003 99 51 42 chr2 65935969 65936414 -184751440 + MER39B LTR ERV1 1 455 -198 2480 74 7 0 chr2 65936414 65936723 -184751131 - AluY SINE Alu 0 311 1 4003 99 51 42 chr2 65936723 65936924 -184750930 + MER39B LTR ERV1 455 653 0 1762 181 7 0 chr2 65937293 65937586 -184750268 - AluJb SINE Alu -17 295 1 767 177 8 0 chr2 65937659 65937783 -184750071 + FLAM_C SINE Alu 2 126 -17 2425 89 0 0 chr2 65937799 65938102 -184749752 + AluSx SINE Alu 1 303 -9 334 229 14 0 chr2 65938172 65938242 -184749612 - L2 LINE L2 -18 3254 3184 2442 100 3 0 chr2 65938291 65938601 -184749253 + AluSp SINE Alu 1 311 -2 22 70 0 0 chr2 65938833 65938876 -184748978 + AT_rich Low_complexity Low_complexity 1 43 0 476 173 34 85 chr2 65938943 65938989 -184748865 - MSTA LTR MaLR -210 218 171 2197 124 3 0 chr2 65938989 65939287 -184748567 + AluSq SINE Alu 1 299 -14 476 173 34 85 chr2 65939287 65939402 -184748452 - MSTA LTR MaLR -257 171 1 803 196 6 18 chr2 65939446 65939609 -184748245 - AluJo SINE Alu -15 297 137 190 301 31 86 chr2 65940465 65940628 -184747226 + L2 LINE L2 2633 2786 -528 938 212 117 94 chr2 65941706 65942235 -184745619 - MER34 LTR ERV1 0 542 2 430 218 81 8 chr2 65942281 65942405 -184745449 + Charlie8 DNA MER1_type 96 228 -2189 738 163 47 16 chr2 65943377 65943506 -184744348 - AluJo SINE Alu -169 133 1 1575 159 48 4 chr2 65943547 65943817 -184744037 - AluJo SINE Alu -30 282 1 183 324 0 0 chr2 65943832 65943900 -184743954 + L2 LINE L2 3231 3298 -15 1890 150 184 44 chr2 65944177 65944650 -184743204 - MER34C LTR ERV1 0 585 47 3351 133 156 7 chr2 65944655 65945270 -184742584 - MER39 LTR ERV1 0 707 1 542 351 30 4 chr2 65946022 65946253 -184741601 - MIR SINE MIR -6 256 20 1722 154 3 25 chr2 65946521 65946806 -184741048 + AluJo SINE Alu 11 289 -23 1998 87 90 11 chr2 65946857 65947134 -184740720 - AluSx SINE Alu -13 299 1 292 287 127 44 chr2 65948536 65948717 -184739137 - MIR SINE MIR -54 208 13 512 238 225 29 chr2 65948940 65949255 -184738599 + L1MC4 LINE L1 7609 7985 -57 1755 154 50 3 chr2 65949296 65949594 -184738260 - AluJb SINE Alu 0 312 1 2424 92 0 6 chr2 65949837 65950151 -184737703 + AluSx SINE Alu 1 312 0 2310 83 3 35 chr2 65950151 65950463 -184737391 + AluSp SINE Alu 1 302 -11 658 256 128 5 chr2 65950921 65951140 -184736714 + MIR SINE MIR 17 262 0 1742 158 47 58 chr2 65952424 65952804 -184735050 + MLT1B LTR MaLR 15 390 0 23 0 0 0 chr2 65953414 65953437 -184734417 + AT_rich Low_complexity Low_complexity 1 23 0 1865 161 6 16 chr2 65953437 65953748 -184734106 - AluJb SINE Alu -4 308 1 1766 162 9 64 chr2 65954162 65954490 -184733364 - AluJb SINE Alu -1 311 2 2399 103 0 7 chr2 65954535 65954845 -184733009 + AluSx SINE Alu 1 308 -4 2272 117 3 0 chr2 65954904 65955213 -184732641 + AluSq SINE Alu 1 310 -3 2026 136 7 7 chr2 65955237 65955539 -184732315 - AluJb SINE Alu -10 302 1 189 107 0 0 chr2 65955879 65955907 -184731947 + (T)n Simple_repeat Simple_repeat 1 28 0 669 203 24 0 chr2 65956525 65956648 -184731206 + FLAM_A SINE Alu 1 126 -7 2227 103 10 10 chr2 65956671 65956981 -184730873 + AluSg SINE Alu 1 310 0 368 40 20 0 chr2 65956982 65957032 -184730822 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 2151 106 3 7 chr2 65957465 65957772 -184730082 + AluSg SINE Alu 1 306 0 1722 146 0 0 chr2 65957986 65958259 -184729595 - AluSx SINE Alu 0 311 39 6969 55 75 0 chr2 65959209 65960183 -184727671 - L1PA10 LINE L1 0 6168 5175 7598 123 3 22 chr2 65960183 65961189 -184726665 + L1P LINE L1 3997 5020 -1126 2244 124 7 0 chr2 65961189 65961487 -184726367 + AluSx SINE Alu 1 300 -12 2118 152 0 0 chr2 65961493 65961803 -184726051 + AluSx SINE Alu 1 310 -2 7598 123 3 22 chr2 65961803 65961969 -184725885 + L1P LINE L1 5025 5154 -992 204 97 0 0 chr2 65962043 65962074 -184725780 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 2334 100 0 0 chr2 65962118 65962417 -184725437 + AluY SINE Alu 1 299 -12 255 339 142 0 chr2 65962726 65962853 -184725001 - LTR33 LTR ERVL -376 145 1 216 175 0 25 chr2 65963171 65963211 -184724643 + CT-rich Low_complexity Low_complexity 5 43 0 2123 54 77 0 chr2 65963341 65963636 -184724218 + AluY SINE Alu 1 315 0 1172 109 0 0 chr2 65963718 65963874 -184723980 - AluSg/x SINE Alu -8 304 149 200 57 0 57 chr2 65964885 65964920 -184722934 + (TTTTC)n Simple_repeat Simple_repeat 1 33 0 2008 154 0 0 chr2 65964934 65965226 -184722628 - AluJb SINE Alu -20 292 1 282 29 0 0 chr2 65965245 65965280 -184722574 + (CA)n Simple_repeat Simple_repeat 2 36 0 2317 93 7 0 chr2 65965280 65965570 -184722284 - AluSg SINE Alu -18 292 1 1995 117 34 17 chr2 65965947 65966238 -184721616 + AluSx SINE Alu 1 296 -16 744 235 46 126 chr2 65966785 65967216 -184720638 - MER34 LTR ERV1 -1 541 168 1347 149 123 41 chr2 65967216 65967485 -184720369 - AluJb SINE Alu -21 291 1 744 235 46 126 chr2 65967485 65967641 -184720213 - MER34 LTR ERV1 -374 168 1 969 137 15 117 chr2 65967946 65968151 -184719703 + AluJo SINE Alu 90 273 -39 297 293 28 0 chr2 65968554 65968660 -184719194 + MIR SINE MIR 104 212 -50 2394 71 0 3 chr2 65968738 65969033 -184718821 - AluY SINE Alu -16 295 2 1902 118 0 26 chr2 65969593 65969863 -184717991 - AluJb SINE Alu -34 278 16 22 0 0 0 chr2 65969875 65969897 -184717957 + AT_rich Low_complexity Low_complexity 1 22 0 202 280 4 0 chr2 65969897 65969957 -184717897 - MER5A DNA MER1_type -48 130 70 420 249 102 34 chr2 65971530 65971566 -184716288 - L1ME LINE L1 -462 5659 5627 2291 99 0 13 chr2 65971566 65971869 -184715985 - AluSx SINE Alu -13 299 1 420 249 102 34 chr2 65971869 65972009 -184715845 - L1ME LINE L1 -494 5627 5471 566 202 31 16 chr2 65972307 65972436 -184715418 + FLAM_A SINE Alu 1 131 -2 331 20 0 40 chr2 65972437 65972487 -184715367 + (GA)n Simple_repeat Simple_repeat 1 48 0 2219 113 0 16 chr2 65972988 65973298 -184714556 - AluSg SINE Alu -5 305 1 2323 105 0 0 chr2 65973298 65973602 -184714252 - AluSx SINE Alu -8 304 1 656 166 7 58 chr2 65974169 65974308 -184713546 - FRAM SINE Alu 0 40 1 1648 148 67 11 chr2 65975193 65975477 -184712377 + AluJo SINE Alu 5 304 -8 25 0 0 0 chr2 65975890 65975915 -184711939 + AT_rich Low_complexity Low_complexity 1 25 0 1368 160 9 5 chr2 65975917 65976136 -184711718 + AluJo SINE Alu 1 220 -92 1689 154 69 0 chr2 65976191 65976451 -184711403 + AluJb SINE Alu 16 293 -19 673 99 11 0 chr2 65976726 65976817 -184711037 + FLAM_A SINE Alu 23 114 -28 1746 147 111 3 chr2 65977462 65977768 -184710086 - L1PA16 LINE L1 -24 6142 5804 284 185 81 62 chr2 65977821 65977920 -184709934 + MER34 LTR ERV1 444 537 -5 389 272 102 47 chr2 65977922 65978012 -184709842 - L1MC4a LINE L1 -1966 5842 5758 5375 103 23 55 chr2 65978012 65978913 -184708941 + MER4D LTR ERV1 1 872 0 389 272 102 47 chr2 65978913 65979055 -184708799 - L1MC4a LINE L1 -2050 5758 5592 186 43 0 0 chr2 65979055 65979078 -184708776 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 389 272 102 47 chr2 65979078 65979098 -184708756 - L1MC4a LINE L1 -2216 5592 5575 751 199 170 18 chr2 65979108 65979279 -184708575 + MER63A DNA MER1_type 8 204 -6 304 274 0 0 chr2 65979310 65979383 -184708471 - L1MC4a LINE L1 -531 5590 5518 1662 114 166 0 chr2 65979385 65979675 -184708179 + Tigger3b DNA MER2_type 1 338 -893 258 33 0 0 chr2 65979767 65979797 -184708057 - LTR6A LTR ERV1 -462 102 73 5079 98 113 7 chr2 65980710 65981525 -184706329 + Tigger3b DNA MER2_type 331 1231 0 1015 122 42 69 chr2 65981704 65981870 -184705984 - AluJb SINE Alu -8 304 142 2144 118 0 20 chr2 65981870 65982176 -184705678 - AluSx SINE Alu -12 300 1 1015 122 42 69 chr2 65982176 65982198 -184705656 - AluJb SINE Alu -170 142 121 288 0 0 0 chr2 65982416 65982448 -184705406 + (CA)n Simple_repeat Simple_repeat 2 33 0 262 320 141 6 chr2 65983191 65983347 -184704507 + MER5B DNA MER1_type 2 178 0 580 184 289 14 chr2 65983349 65983567 -184704287 + MER5C DNA MER1_type 47 324 0 580 215 37 47 chr2 65983626 65983642 -184704212 + MER93b LTR ERV1 4 19 -383 2023 124 3 0 chr2 65983642 65983952 -184703902 + AluSx SINE Alu 1 311 0 580 215 37 47 chr2 65983952 65984221 -184703633 + MER93b LTR ERV1 19 395 -7 1568 153 102 25 chr2 65985044 65985319 -184702535 - AluJo SINE Alu -16 296 1 293 175 150 12 chr2 65985354 65985434 -184702420 - L1MC5 LINE L1 -593 7368 7278 317 259 105 59 chr2 65985764 65986003 -184701851 + L2 LINE L2 3058 3307 -6 644 250 37 0 chr2 65986210 65986374 -184701480 + L1MC5 LINE L1 7273 7442 -519 815 168 0 0 chr2 65986413 65986538 -184701316 + FLAM_C SINE Alu 2 126 -7 568 263 134 51 chr2 65986556 65986582 -184701272 + L1MC4 LINE L1 7556 7578 -464 1930 122 56 0 chr2 65986582 65986870 -184700984 + AluSx SINE Alu 1 304 -8 568 263 134 51 chr2 65986870 65987099 -184700755 + L1MC4 LINE L1 7578 7787 -255 2160 92 46 0 chr2 65987099 65987381 -184700473 + AluSp SINE Alu 1 295 -18 568 263 134 51 chr2 65987381 65987534 -184700320 + L1MC4 LINE L1 7787 7999 -43 3772 201 53 38 chr2 65987568 65987855 -184699999 - L1ME1 LINE L1 -6 6160 5879 1796 184 82 53 chr2 65987855 65987926 -184699928 - MLT1C LTR MaLR -3 464 397 2344 97 7 3 chr2 65987926 65988235 -184699619 + AluSx SINE Alu 1 310 -2 1796 184 82 53 chr2 65988235 65988614 -184699240 - MLT1C LTR MaLR -70 397 1 3772 201 53 38 chr2 65988614 65989099 -184698755 - L1ME1 LINE L1 -287 5879 5403 2209 95 13 16 chr2 65989099 65989405 -184698449 - AluY SINE Alu -6 305 1 3772 201 53 38 chr2 65989405 65989537 -184698317 - L1ME1 LINE L1 -763 5403 5274 2291 95 3 0 chr2 65989537 65989842 -184698012 - AluSx SINE Alu -6 306 1 3772 201 53 38 chr2 65989842 65989977 -184697877 - L1ME1 LINE L1 -892 5274 5095 256 243 68 0 chr2 65990120 65990194 -184697660 - HAL1 LINE L1 -93 2414 2336 241 238 48 0 chr2 65991460 65991523 -184696331 - MIR SINE MIR -71 191 126 1389 268 31 42 chr2 65992191 65992669 -184695185 + L1M4b LINE L1 11 483 -6376 4184 140 34 4 chr2 65992670 65993382 -184694472 + L1MD1 LINE L1 5510 6242 0 1505 174 81 18 chr2 65993387 65993721 -184694133 + L1MB8 LINE L1 5328 5682 -502 1367 127 105 51 chr2 65993722 65993967 -184693887 + L1MB8 LINE L1 5800 6068 -110 2308 64 3 3 chr2 65993967 65994297 -184693557 + AluSx SINE Alu 1 330 0 1367 127 105 51 chr2 65994297 65994364 -184693490 + L1MB8 LINE L1 6068 6130 -48 325 141 16 0 chr2 65994403 65994467 -184693387 + L1MB8 LINE L1 6108 6172 -6 2084 143 0 16 chr2 65994526 65994840 -184693014 - AluJb SINE Alu -3 309 1 227 167 24 0 chr2 65994856 65994898 -184692956 - L1MC4 LINE L1 0 8042 8000 738 229 78 0 chr2 65995033 65995199 -184692655 + MER20 DNA MER1_type 38 216 -3 601 168 7 66 chr2 65995236 65995373 -184692481 + FLAM_A SINE Alu 1 129 -4 380 232 111 0 chr2 65996159 65996258 -184691596 - L2 LINE L2 -9 3304 3195 216 0 0 0 chr2 65996330 65996354 -184691500 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1662 145 16 55 chr2 65996355 65996665 -184691189 - MLT1A2 LTR MaLR -76 298 1 519 143 183 16 chr2 65996985 65997111 -184690743 + FRAM SINE Alu 1 146 -30 2327 163 31 79 chr2 65998273 65998640 -184689214 + L1MD2 LINE L1 5450 5786 -573 2337 99 3 3 chr2 65998640 65998944 -184688910 + AluSq SINE Alu 1 304 -9 2327 163 31 79 chr2 65998944 65999097 -184688757 + L1MD2 LINE L1 5786 5945 -414 529 154 18 0 chr2 66049237 66049347 -184638507 + (TA)n Simple_repeat Simple_repeat 1 112 0 2122 101 25 0 chr2 66049347 66049625 -184638229 - AluSx SINE Alu -27 285 1 244 302 0 75 chr2 66049795 66049901 -184637953 - MIR3 SINE MIR -103 105 8 1927 83 0 29 chr2 66051186 66051462 -184636392 - AluY SINE Alu -43 268 1 309 258 0 0 chr2 66051463 66051529 -184636325 + MER82 DNA MER2_type 588 653 0 1953 122 3 21 chr2 66051717 66052024 -184635830 - AluSx SINE Alu 0 302 1 2013 171 71 6 chr2 66052395 66052734 -184635120 + MLT1A1 LTR MaLR 5 365 0 657 180 29 7 chr2 66052919 66053058 -184634796 - L1M4 LINE L1 -1034 5112 4971 188 258 30 45 chr2 66053577 66053643 -184634211 - L3 LINE CR1 -3 1574 1510 220 109 0 109 chr2 66053648 66053694 -184634160 - MIR SINE MIR -106 156 116 313 242 170 20 chr2 66053695 66053848 -184634006 - MLT1K LTR MaLR -159 429 254 191 93 37 37 chr2 66053855 66053909 -184633945 + (TATATG)n Simple_repeat Simple_repeat 5 58 0 1876 148 17 13 chr2 66054032 66054330 -184633524 + AluJb SINE Alu 1 299 -13 2052 152 0 0 chr2 66054668 66054965 -184632889 - AluJb SINE Alu -15 297 1 357 159 0 0 chr2 66055073 66055136 -184632718 + CT-rich Low_complexity Low_complexity 2 64 0 1546 162 29 18 chr2 66055270 66055542 -184632312 - MER82 DNA MER2_type -378 275 1 2378 100 0 0 chr2 66055634 66055933 -184631921 + AluSx SINE Alu 1 299 -13 399 303 92 87 chr2 66056463 66056938 -184630916 - L2 LINE L2 -266 3006 2525 741 279 47 80 chr2 66056938 66057361 -184630493 - MLT1I LTR MaLR 0 409 1 399 303 92 87 chr2 66057361 66057535 -184630319 - L2 LINE L2 -747 2525 2353 285 268 268 28 chr2 66059295 66059437 -184628417 - MIR SINE MIR -38 224 49 459 295 42 12 chr2 66060209 66060266 -184627588 - MIR SINE MIR -57 205 151 1496 174 116 0 chr2 66060266 66060576 -184627278 - MER7A DNA MER2_type -1 345 2 459 295 42 12 chr2 66060576 66060684 -184627170 - MIR SINE MIR -111 151 35 186 43 0 0 chr2 66061085 66061108 -184626746 + (TG)n Simple_repeat Simple_repeat 2 24 0 770 195 0 0 chr2 66061695 66061823 -184626031 - FLAM_C SINE Alu -5 128 1 1429 189 0 11 chr2 66062684 66062948 -184624906 - AluJb SINE Alu -51 261 1 1365 165 40 103 chr2 66063784 66064105 -184623749 + AluJb SINE Alu 1 301 -11 22 0 0 0 chr2 66064226 66064248 -184623606 + AT_rich Low_complexity Low_complexity 1 22 0 6348 104 27 5 chr2 66064248 66065373 -184622481 - L1MA3 LINE L1 0 6305 5156 25 31 0 0 chr2 66065540 66065572 -184622282 + AT_rich Low_complexity Low_complexity 1 32 0 200 167 0 37 chr2 66065791 66065845 -184622009 + T-rich Low_complexity Low_complexity 2 53 0 288 345 18 18 chr2 66065892 66066002 -184621852 - MIR SINE MIR -132 130 21 306 295 40 121 chr2 66066505 66066925 -184620929 + L3 LINE CR1 1178 1563 -14 734 273 112 26 chr2 66067711 66068059 -184619795 - MLT1K LTR MaLR -8 580 203 2456 69 3 0 chr2 66068085 66068389 -184619465 + AluY SINE Alu 1 305 -6 243 170 0 0 chr2 66069473 66069520 -184618334 + GA-rich Low_complexity Low_complexity 4 50 0 2265 132 66 53 chr2 66069541 66069646 -184618208 - MLT1C LTR MaLR 0 467 365 1720 159 13 46 chr2 66069646 66070035 -184617819 + L1MA7 LINE L1 5916 6291 0 2265 132 66 53 chr2 66070035 66070384 -184617470 - MLT1C LTR MaLR -102 365 7 499 264 202 19 chr2 66071576 66071784 -184616070 - MIR SINE MIR -10 252 7 333 292 21 0 chr2 66071825 66071921 -184615933 + MIR3 SINE MIR 109 206 -2 22 0 0 0 chr2 66073036 66073058 -184614796 + AT_rich Low_complexity Low_complexity 1 22 0 2227 109 55 13 chr2 66073058 66073442 -184614412 - L1MA5A LINE L1 -3 6294 5895 29 0 0 25 chr2 66074054 66074067 -184613787 + AT_rich Low_complexity Low_complexity 1 13 -26 1916 117 0 74 chr2 66074067 66074376 -184613478 + AluSx SINE Alu 1 286 -26 29 0 0 25 chr2 66074376 66074402 -184613452 + AT_rich Low_complexity Low_complexity 13 39 0 2178 110 0 16 chr2 66074988 66075298 -184612556 + AluSg SINE Alu 1 305 -5 774 242 92 39 chr2 66075841 66076101 -184611753 - MLT1J LTR MaLR 0 511 238 502 257 53 13 chr2 66076148 66076300 -184611554 - MLT1J LTR MaLR -349 162 5 250 241 121 69 chr2 66076342 66076458 -184611396 - MIR3 SINE MIR -43 165 44 3711 164 42 71 chr2 66076603 66077447 -184610407 - L1MB7 LINE L1 -9 6175 5326 3985 89 60 10 chr2 66077447 66078063 -184609791 - L1MA3 LINE L1 0 6305 5659 3711 164 42 71 chr2 66078063 66078195 -184609659 - L1MB7 LINE L1 -858 5326 5192 2072 142 23 10 chr2 66078201 66078589 -184609265 - L1MA4 LINE L1 -14 6286 5894 622 165 10 0 chr2 66078701 66078798 -184609056 - AluJ/FLAM SINE Alu -214 98 1 267 152 0 0 chr2 66078906 66078952 -184608902 + CT-rich Low_complexity Low_complexity 1 46 0 1822 146 79 0 chr2 66078952 66079232 -184608622 - AluSg SINE Alu -8 302 1 351 174 0 0 chr2 66079232 66079286 -184608568 + T-rich Low_complexity Low_complexity 1 57 -12 2357 82 0 13 chr2 66079286 66079601 -184608253 - AluY SINE Alu 0 311 1 351 174 0 0 chr2 66079601 66079615 -184608239 + T-rich Low_complexity Low_complexity 56 69 0 411 289 35 0 chr2 66080378 66080492 -184607362 + L2 LINE L2 3195 3312 -1 767 189 105 21 chr2 66083447 66083637 -184604217 - MER3 DNA MER1_type -1 208 3 1464 125 94 3 chr2 66083945 66084242 -184603612 - MER33 DNA MER1_type 0 324 1 21 0 0 0 chr2 66085038 66085059 -184602795 + AT_rich Low_complexity Low_complexity 1 21 0 369 194 172 60 chr2 66085600 66085734 -184602120 - MIR SINE MIR -18 244 96 1362 120 97 142 chr2 66085831 66086140 -184601714 + AluJb SINE Alu 1 295 -17 183 139 0 0 chr2 66088745 66088781 -184599073 + (CGG)n Simple_repeat Simple_repeat 1 36 0 272 293 162 10 chr2 66091082 66091181 -184596673 - L2 LINE L2 -18 3254 3141 675 212 62 39 chr2 66091259 66091438 -184596416 + MIR SINE MIR 79 261 -1 257 329 67 71 chr2 66091492 66092146 -184595708 - L2 LINE L2 -222 3050 2390 43 0 0 0 chr2 66093288 66093331 -184594523 + AT_rich Low_complexity Low_complexity 1 43 0 322 252 261 0 chr2 66093812 66093923 -184593931 - L2 LINE L2 -630 2684 2545 439 151 0 65 chr2 66093973 66094066 -184593788 - L1ME2 LINE L1 -9 6155 6069 4057 273 126 10 chr2 66094080 66095627 -184592227 - L2 LINE L2 -781 2533 808 24 53 0 0 chr2 66095738 66095776 -184592078 + AT_rich Low_complexity Low_complexity 1 38 0 642 232 24 71 chr2 66095857 66096038 -184591816 - L2 LINE L2 -2508 806 639 1984 128 38 7 chr2 66096038 66096327 -184591527 - AluSx SINE Alu -14 298 1 642 232 24 71 chr2 66096327 66096399 -184591455 - L2 LINE L2 -2675 639 565 456 129 0 108 chr2 66096911 66097004 -184590850 + AluJb SINE Alu 35 117 -195 186 43 0 0 chr2 66097007 66097030 -184590824 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 586 218 106 39 chr2 66097271 66097450 -184590404 + MIR SINE MIR 72 262 0 2320 106 0 0 chr2 66097895 66098197 -184589657 - AluY SINE Alu -9 302 1 21 0 0 0 chr2 66098251 66098272 -184589582 + AT_rich Low_complexity Low_complexity 1 21 0 893 318 46 18 chr2 66098272 66098706 -184589148 + MLT1J LTR MaLR 66 511 0 681 160 16 16 chr2 66099723 66099848 -184588006 - FLAM_C SINE Alu -16 127 3 27 73 0 0 chr2 66100479 66100534 -184587320 + AT_rich Low_complexity Low_complexity 1 55 0 1034 202 5 5 chr2 66101061 66101269 -184586585 - MER3 DNA MER1_type -1 208 1 260 313 61 15 chr2 66101276 66101407 -184586447 - MER5A DNA MER1_type 0 189 53 1572 153 68 14 chr2 66101763 66102044 -184585810 - AluJb SINE Alu -11 301 6 1338 192 36 34 chr2 66102231 66102353 -184585501 + MER119 DNA MER1_type 1 121 -462 1958 129 48 15 chr2 66102353 66102685 -184585169 - MER2 DNA MER2_type -1 343 1 1338 192 36 34 chr2 66102685 66103046 -184584808 + MER119 DNA MER1_type 121 582 -1 331 88 35 0 chr2 66103456 66103513 -184584341 - L1MD3 LINE L1 -9 7986 7928 954 114 60 6 chr2 66103513 66103679 -184584175 + MER30 DNA MER1_type 1 175 -55 2012 177 70 92 chr2 66103692 66104208 -184583646 - L1MD3 LINE L1 -45 7934 7223 498 222 60 0 chr2 66104208 66104325 -184583529 - MLT1F1 LTR MaLR -443 124 1 2012 177 70 92 chr2 66104325 66104587 -184583267 - L1MD3 LINE L1 -756 7223 6957 2302 175 40 68 chr2 66104668 66104913 -184582941 - L1MD3 LINE L1 0 8040 7790 2014 120 28 7 chr2 66104913 66105204 -184582650 - AluY SINE Alu -14 297 1 2302 175 40 68 chr2 66105204 66105634 -184582220 - L1MD3 LINE L1 -250 7790 7399 * 10939 196 30 23 chr2 66105628 66107463 -184580391 - L1PA13 LINE L1 -3336 3461 1558 1651 155 132 26 chr2 66107463 66107767 -184580087 + MER1B DNA MER1_type 2 337 0 10939 196 30 23 chr2 66107767 66109337 -184578517 - L1PA13 LINE L1 -5239 1558 1 225 200 0 0 chr2 66109347 66109392 -184578462 - L1MC4a LINE L1 -626 7600 7556 696 102 0 0 chr2 66109420 66109518 -184578336 - HY1 scRNA scRNA -2 110 13 331 289 99 15 chr2 66109522 66109649 -184578205 - L1MC4a LINE L1 -1550 6676 6561 2387 82 0 0 chr2 66109649 66109942 -184577912 - AluSg SINE Alu -17 293 1 331 289 99 15 chr2 66109942 66110077 -184577777 - L1MC4a LINE L1 -1665 6561 6392 2360 133 84 32 chr2 66110080 66110546 -184577308 - L1MB8 LINE L1 0 6178 5689 2516 177 18 9 chr2 66110554 66111005 -184576849 - LTR35 LTR ERV1 0 618 164 1907 166 55 49 chr2 66111034 66111787 -184576067 - L1MB8 LINE L1 -529 5655 4907 704 212 51 77 chr2 66111791 66112065 -184575789 - L1MC4a LINE L1 -1806 6420 6154 680 18 72 36 chr2 66112071 66112238 -184575616 + (TATAA)n Simple_repeat Simple_repeat 5 177 0 265 120 20 0 chr2 66112238 66112288 -184575566 + (TA)n Simple_repeat Simple_repeat 1 51 0 672 41 64 23 chr2 66112288 66112459 -184575395 + (TATAA)n Simple_repeat Simple_repeat 1 178 0 1265 186 25 8 chr2 66112491 66112727 -184575127 - L1MC4a LINE L1 -2152 6074 5835 713 188 0 0 chr2 66112727 66112844 -184575010 - Tigger1 DNA MER2_type 0 2418 2302 2281 146 35 12 chr2 66112891 66113408 -184574446 - L1MC2 LINE L1 -2 6342 5695 437 232 3 0 chr2 66113424 66113757 -184574097 + GA-rich Low_complexity Low_complexity 1 334 0 530 217 30 0 chr2 66113757 66113894 -184573960 - L1M4 LINE L1 -1527 4619 4479 622 169 0 16 chr2 66114015 66114198 -184573656 + GA-rich Low_complexity Low_complexity 1 180 0 249 113 19 38 chr2 66114198 66114251 -184573603 + (CAGA)n Simple_repeat Simple_repeat 3 54 0 584 184 6 0 chr2 66114261 66114358 -184573496 + GA-rich Low_complexity Low_complexity 1 101 -79 321 47 0 0 chr2 66114358 66114401 -184573453 + (CA)n Simple_repeat Simple_repeat 2 44 0 584 184 6 0 chr2 66114401 66114482 -184573372 + GA-rich Low_complexity Low_complexity 101 180 0 3106 190 54 52 chr2 66114494 66115352 -184572502 - L1MC4a LINE L1 -1539 5025 4167 * 3471 194 98 49 chr2 66115350 66115909 -184571945 - L1MCb LINE L1 -4546 2018 1488 2301 136 83 5 chr2 66115909 66116306 -184571548 + MSTA LTR MaLR 1 428 0 3471 194 98 49 chr2 66116306 66117614 -184570240 - L1MCb LINE L1 -5076 1488 4 411 276 116 55 chr2 66117665 66117940 -184569914 - L1M4 LINE L1 -913 5233 4942 769 164 87 10 chr2 66118007 66118275 -184569579 - L1MCa LINE L1 -3950 2476 2314 833 153 0 0 chr2 66118298 66118422 -184569432 - FLAM_C SINE Alu -19 124 1 1754 168 21 3 chr2 66118432 66118723 -184569131 - AluJb SINE Alu -16 296 1 9241 123 35 22 chr2 66118723 66119753 -184568101 - L1MCa LINE L1 -4105 2321 1306 2193 117 10 0 chr2 66119753 66120052 -184567802 - AluSx SINE Alu -10 302 1 9241 123 35 22 chr2 66120052 66121165 -184566689 - L1MCa LINE L1 -5120 1306 60 696 122 94 122 chr2 66121174 66121300 -184566554 - L1M4 LINE L1 -576 5608 5487 1722 191 3 7 chr2 66121300 66121593 -184566261 - AluJo SINE Alu -20 292 1 696 122 94 122 chr2 66121593 66121646 -184566208 - L1M4 LINE L1 -697 5487 5434 511 300 114 51 chr2 66121632 66122158 -184565696 - HAL1 LINE L1 -152 2355 1797 * 550 259 198 24 chr2 66122157 66122536 -184565318 - HAL1 LINE L1 -1276 1231 787 231 276 187 24 chr2 66122554 66122677 -184565177 - MIR SINE MIR -8 254 112 1807 154 33 3 chr2 66123189 66123488 -184564366 + AluJo SINE Alu 1 308 -4 189 0 0 0 chr2 66123519 66123540 -184564314 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1015 273 77 24 chr2 66124716 66125253 -184562601 + L2 LINE L2 2600 3168 -145 297 256 128 51 chr2 66126375 66126492 -184561362 - MIR3 SINE MIR -42 166 41 1513 182 83 19 chr2 66126496 66126688 -184561166 - MER2 DNA MER2_type 0 345 122 2063 147 17 20 chr2 66126688 66127036 -184560818 + MER7A DNA MER2_type 2 346 0 1513 182 83 19 chr2 66127036 66127167 -184560687 - MER2 DNA MER2_type -223 122 1 21 36 0 0 chr2 66127599 66127627 -184560227 + AT_rich Low_complexity Low_complexity 1 28 0 256 283 104 0 chr2 66127783 66127889 -184559965 - L1ME4a LINE L1 -56 6065 5949 313 277 30 0 chr2 66127915 66128016 -184559838 - L1ME4a LINE L1 -244 5877 5774 484 214 120 8 chr2 66128235 66128352 -184559502 + L2 LINE L2 3136 3265 -7 7967 177 15 3 chr2 66128733 66130211 -184557643 - L1P LINE L1 -1832 4314 2819 1876 167 7 3 chr2 66130212 66130511 -184557343 - AluJb SINE Alu -10 302 3 859 138 8 0 chr2 66130518 66130648 -184557206 - AluJb SINE Alu -179 133 3 23 54 0 0 chr2 66130674 66130711 -184557143 + AT_rich Low_complexity Low_complexity 1 37 0 2136 151 12 60 chr2 66131013 66131429 -184556425 + MSTD LTR MaLR 1 396 0 6974 225 22 47 chr2 66131431 66133208 -184554646 + MSTD-int LTR MaLR 2 1735 0 2113 178 34 0 chr2 66133208 66133591 -184554263 + MSTD LTR MaLR 1 396 0 515 125 0 0 chr2 66134858 66134938 -184552916 - MADE1 DNA Mariner 0 80 1 198 263 18 53 chr2 66134984 66135041 -184552813 + MIR SINE MIR 19 73 -135 318 290 15 11 chr2 66136143 66136279 -184551575 + MER5A DNA MER1_type 3 186 -3 212 235 59 0 chr2 66136286 66136337 -184551517 + L2 LINE L2 3257 3310 -3 192 40 0 0 chr2 66137888 66137913 -184549941 + (CA)n Simple_repeat Simple_repeat 2 26 0 2402 122 6 0 chr2 66137913 66138266 -184549588 + L1PB1 LINE L1 5789 6146 -5 1428 193 68 17 chr2 66138340 66138636 -184549218 - AluJo SINE Alu -1 311 1 2397 81 0 3 chr2 66139516 66139813 -184548041 + AluSx SINE Alu 1 296 -16 1442 139 0 5 chr2 66141246 66141454 -184546400 - AluSx SINE Alu -105 207 1 24 32 0 0 chr2 66141514 66141545 -184546309 + AT_rich Low_complexity Low_complexity 1 31 0 1131 72 0 20 chr2 66141598 66141750 -184546104 + AluY SINE Alu 151 299 -12 1968 141 10 0 chr2 66141835 66142125 -184545729 - AluSx SINE Alu -16 296 4 2175 117 7 0 chr2 66143127 66143425 -184544429 - AluSx SINE Alu -12 300 1 1273 191 21 8 chr2 66143700 66143936 -184543918 + MER8 DNA MER2_type 1 239 0 219 294 188 38 chr2 66144460 66144620 -184543234 + MIR3 SINE MIR 15 198 -10 361 284 223 26 chr2 66146414 66146795 -184541059 + L2 LINE L2 2201 2656 -658 229 257 140 15 chr2 66146859 66146995 -184540859 - L1ME4a LINE L1 -1 6120 5968 336 292 35 35 chr2 66147054 66147225 -184540629 - L1ME4a LINE L1 -288 5833 5663 2193 81 3 7 chr2 66147293 66147601 -184540253 + L1PA5 LINE L1 5846 6152 -2 418 287 8 0 chr2 66147608 66147730 -184540124 + L1ME2 LINE L1 6033 6155 -9 1660 153 14 28 chr2 66147918 66148200 -184539654 - AluJo SINE Alu -19 293 16 892 205 49 13 chr2 66148519 66148745 -184539109 - MSTD LTR MaLR 0 396 122 336 292 35 35 chr2 66148944 66149115 -184538739 - L1ME4a LINE L1 -288 5833 5663 1949 116 30 0 chr2 66149183 66149486 -184538368 + L1PA16 LINE L1 5846 6157 -9 6989 133 96 98 chr2 66149505 66149678 -184538176 + L1MCa LINE L1 324 496 -5930 2425 92 0 0 chr2 66149678 66149983 -184537871 - AluSg SINE Alu -5 305 1 6989 133 96 98 chr2 66149983 66150917 -184536937 + L1MCa LINE L1 496 1431 -4995 668 169 16 0 chr2 66150917 66151041 -184536813 - FLAM_C SINE Alu -3 140 15 6989 133 96 98 chr2 66151041 66151423 -184536431 + L1MCa LINE L1 1431 1934 -4492 2272 105 3 3 chr2 66151423 66151728 -184536126 - AluSp SINE Alu -8 305 1 6989 133 96 98 chr2 66151728 66151819 -184536035 + L1MCa LINE L1 1934 2024 -4402 419 171 14 0 chr2 66151819 66151888 -184535966 + Tigger2 DNA MER2_type 3 72 -2646 234 254 109 0 chr2 66151888 66151943 -184535911 - MER2 DNA MER2_type -1 344 284 * 442 261 0 0 chr2 66151922 66152014 -184535840 - MER8 DNA MER2_type -62 177 86 290 172 138 0 chr2 66151995 66152053 -184535801 - MER2 DNA MER2_type -278 67 2 * 1869 155 18 93 chr2 66152053 66152332 -184535522 + L1MCa LINE L1 2038 2336 -4189 1664 184 31 0 chr2 66152332 66152626 -184535228 + AluJo SINE Alu 1 303 -9 1869 155 18 93 chr2 66152626 66152710 -184535144 + L1MCa LINE L1 2336 2425 -4100 1956 157 0 13 chr2 66152710 66153010 -184534844 + AluJb SINE Alu 1 296 -16 1869 155 18 93 chr2 66153010 66153178 -184534676 + L1MCa LINE L1 2425 2577 -3948 1797 176 7 7 chr2 66153179 66153469 -184534385 + AluSx SINE Alu 3 292 -20 249 228 88 9 chr2 66153488 66153602 -184534252 - L1ME4a LINE L1 -18 6103 5981 464 251 114 29 chr2 66153618 66153961 -184533893 - L1ME4a LINE L1 -187 5934 5563 2312 117 6 29 chr2 66153961 66154302 -184533552 - MER1B DNA MER1_type 0 339 7 3805 256 110 69 chr2 66155077 66155490 -184532364 + L2 LINE L2 1454 1849 -1464 466 156 0 0 chr2 66155490 66155567 -184532287 - FLAM_A SINE Alu -55 77 1 3805 256 110 69 chr2 66155567 66156841 -184531013 + L2 LINE L2 1849 3280 -33 186 43 0 0 chr2 66156852 66156875 -184530979 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 380 255 10 10 chr2 66156884 66156986 -184530868 + MIR SINE MIR 161 262 0 25 31 0 0 chr2 66158862 66158894 -184528960 + AT_rich Low_complexity Low_complexity 1 32 0 303 200 71 14 chr2 66158900 66158961 -184528893 - L2 LINE L2 -1 3271 3207 425 274 143 16 chr2 66158961 66159195 -184528659 + MIR SINE MIR 3 262 0 1754 136 6 31 chr2 66160450 66160767 -184527087 + L1PA14 LINE L1 5851 6159 -2 198 143 0 0 chr2 66161198 66161233 -184526621 + (TATG)n Simple_repeat Simple_repeat 4 38 0 32 0 0 0 chr2 66161234 66161266 -184526588 + AT_rich Low_complexity Low_complexity 1 32 0 343 274 0 24 chr2 66161292 66161376 -184526478 + L2 LINE L2 3186 3267 -5 1995 131 10 0 chr2 66161417 66161707 -184526147 + AluSq SINE Alu 1 293 -20 395 244 9 0 chr2 66161707 66161822 -184526032 + GA-rich Low_complexity Low_complexity 1 116 0 280 265 12 24 chr2 66162163 66162246 -184525608 + MIR SINE MIR 35 116 -146 203 316 37 88 chr2 66162972 66163108 -184524746 + L2 LINE L2 3185 3313 0 1834 158 3 7 chr2 66163181 66163473 -184524381 + AluSx SINE Alu 22 312 0 1241 129 0 0 chr2 66163681 66163852 -184524002 + AluSx SINE Alu 1 171 -141 792 132 6 92 chr2 66163952 66164110 -184523744 + L1P5 LINE L1 5648 5791 -360 564 89 0 0 chr2 66164110 66164189 -184523665 + (CA)n Simple_repeat Simple_repeat 2 80 0 792 132 6 92 chr2 66164189 66164204 -184523650 + L1P5 LINE L1 5791 5806 -345 1371 77 6 0 chr2 66164220 66164388 -184523466 - AluSg SINE Alu -140 170 2 1528 205 27 5 chr2 66164392 66164768 -184523086 - L1P LINE L1 -783 5363 4980 945 141 0 170 chr2 66166331 66166601 -184521253 + Tigger1 DNA MER2_type 1 224 -2194 25 0 0 0 chr2 66167467 66167492 -184520362 + AT_rich Low_complexity Low_complexity 1 25 0 324 303 0 97 chr2 66168512 66168667 -184519187 - MER5B DNA MER1_type 0 178 39 22 0 0 0 chr2 66168759 66168781 -184519073 + AT_rich Low_complexity Low_complexity 1 22 0 260 344 11 11 chr2 66168869 66168959 -184518895 + MIR SINE MIR 36 125 -83 585 307 14 14 chr2 66168959 66169171 -184518683 + L1ME LINE L1 5449 5660 -502 223 270 63 0 chr2 66169179 66169242 -184518612 + MIR SINE MIR 194 260 -2 1626 89 31 15 chr2 66169626 66169885 -184517969 + L1MA2 LINE L1 6042 6304 0 1718 151 36 4 chr2 66170040 66170319 -184517535 - AluJo SINE Alu -24 288 1 323 298 65 54 chr2 66170713 66170881 -184516973 - L1ME3A LINE L1 -38 6132 5963 2006 132 81 8 chr2 66170920 66170944 -184516910 + L1MB4 LINE L1 5757 5778 -402 396 0 0 0 chr2 66170944 66170988 -184516866 + (TA)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr2 66170991 66171015 -184516839 + (CA)n Simple_repeat Simple_repeat 2 25 0 2006 132 81 8 chr2 66171015 66171380 -184516474 + L1MB4 LINE L1 5779 6179 -1 2341 112 0 3 chr2 66171483 66171797 -184516057 - AluSq SINE Alu 0 313 1 1014 285 50 22 chr2 66171797 66171941 -184515913 - L1ME3A LINE L1 -295 5875 5736 2202 110 7 26 chr2 66171941 66172250 -184515604 - AluSx SINE Alu -9 303 1 1014 285 50 22 chr2 66172250 66172466 -184515388 - L1ME3A LINE L1 -434 5736 5505 366 289 124 25 chr2 66172501 66172743 -184515111 - L1ME3A LINE L1 -2291 3855 3590 238 315 27 0 chr2 66172783 66172932 -184514922 - L1ME3A LINE L1 -2739 3407 3255 783 181 0 0 chr2 66173180 66173313 -184514541 - AluJb SINE Alu -179 133 1 1478 246 47 13 chr2 66173676 66174163 -184513691 + L1ME2 LINE L1 5497 6023 -141 41069 63 5 4 chr2 66174167 66179753 -184508101 + L1P2 LINE L1 1 5588 -567 2508 65 0 0 chr2 66181039 66181346 -184506508 - AluY SINE Alu -4 307 1 567 217 127 19 chr2 66181421 66181578 -184506276 - MIR SINE MIR -26 236 63 2039 133 7 3 chr2 66181682 66181984 -184505870 - AluSx SINE Alu -9 303 1 255 223 107 62 chr2 66182203 66182315 -184505539 - MIR SINE MIR -96 166 50 22 0 0 0 chr2 66183220 66183242 -184504612 + AT_rich Low_complexity Low_complexity 1 22 0 314 305 46 52 chr2 66184739 66184913 -184502941 + HAL1 LINE L1 2333 2505 -2 23 0 0 0 chr2 66187095 66187118 -184500736 + AT_rich Low_complexity Low_complexity 1 23 0 205 304 18 0 chr2 66187523 66187579 -184500275 - L2 LINE L2 -5 3308 3252 287 170 0 0 chr2 66187675 66187722 -184500132 + MER66A LTR ERV1 290 336 -142 429 296 52 7 chr2 66188937 66189072 -184498782 + MIR3 SINE MIR 67 207 -1 655 258 71 22 chr2 66192528 66192783 -184495071 + MLT1G LTR MaLR 23 246 -344 29 47 0 0 chr2 66193386 66193429 -184494425 + AT_rich Low_complexity Low_complexity 1 43 0 194 323 52 81 chr2 66193454 66193801 -184494053 + L2 LINE L2 2339 2675 -639 631 215 61 73 chr2 66193813 66194059 -184493795 - MER112 DNA MER1_type -11 249 7 211 313 15 0 chr2 66194063 66194130 -184493724 + L2 LINE L2 2688 2755 -559 244 242 55 55 chr2 66194149 66194240 -184493614 + MER5B DNA MER1_type 86 176 -2 352 313 75 95 chr2 66194383 66194677 -184493177 + L2 LINE L2 2926 3213 -59 8555 114 35 4 chr2 66195045 66196283 -184491571 + THE1C-int LTR MaLR 305 1580 0 2045 114 88 23 chr2 66196283 66196635 -184491219 + THE1C LTR MaLR 1 375 0 268 289 35 53 chr2 66196974 66197088 -184490766 + MIR SINE MIR 7 118 -90 930 206 43 82 chr2 66197534 66197815 -184490039 - MER46C DNA MER2_type -61 277 8 431 387 75 20 chr2 66197826 66198079 -184489775 + L2 LINE L2 3004 3270 -2 1689 168 13 20 chr2 66199566 66199869 -184487985 - AluJo SINE Alu -11 301 1 248 201 23 167 chr2 66200447 66200621 -184487233 - MER104 DNA Tc2 -3 177 29 21 36 0 0 chr2 66200820 66200848 -184487006 + AT_rich Low_complexity Low_complexity 1 28 0 1796 162 14 10 chr2 66200856 66201152 -184486702 + AluJo SINE Alu 1 297 -15 466 245 105 42 chr2 66201699 66201842 -184486012 - MIR SINE MIR -48 214 63 829 234 67 42 chr2 66202228 66202467 -184485387 + MIR SINE MIR 5 249 -13 215 179 51 0 chr2 66202433 66202472 -184485382 + L2 LINE L2 3261 3301 -12 * 27 0 0 0 chr2 66202961 66202988 -184484866 + AT_rich Low_complexity Low_complexity 1 27 0 1245 184 4 9 chr2 66203260 66203488 -184484366 - AluJo SINE Alu -8 304 78 407 214 22 45 chr2 66203493 66203582 -184484272 + L2 LINE L2 3227 3313 0 235 639 0 18 chr2 66203711 66203877 -184483977 + polypyrimidine Low_complexity Low_complexity 2 164 0 660 32 32 0 chr2 66204877 66204972 -184482882 + (GA)n Simple_repeat Simple_repeat 1 98 0 990 260 29 21 chr2 66206984 66207226 -184480628 + MIR SINE MIR 1 244 -18 180 77 0 0 chr2 66207226 66207252 -184480602 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 28 0 0 0 chr2 66207252 66207280 -184480574 + AT_rich Low_complexity Low_complexity 1 28 0 429 267 0 0 chr2 66208803 66208968 -184478886 + (TAG)n Simple_repeat Simple_repeat 1 165 0 431 335 74 5 chr2 66209016 66209231 -184478623 - MIR SINE MIR -12 250 21 441 233 213 13 chr2 66209259 66209409 -184478445 - MER5A DNA MER1_type 0 189 10 309 289 0 12 chr2 66209453 66209536 -184478318 + MIR3 SINE MIR 113 194 -14 276 30 0 0 chr2 66210302 66210335 -184477519 + (T)n Simple_repeat Simple_repeat 1 33 0 663 269 108 58 chr2 66210764 66211330 -184476524 - MLT1G1 LTR MaLR -1 594 1 802 147 0 29 chr2 66211885 66212021 -184475833 + FLAM_C SINE Alu 1 132 -1 211 54 54 0 chr2 66212891 66212928 -184474926 + GA-rich Low_complexity Low_complexity 2 40 0 184 328 35 94 chr2 66213064 66213320 -184474534 + L2 LINE L2 2816 3056 -216 378 148 0 99 chr2 66213425 66213506 -184474348 - AluJb SINE Alu -3 299 227 765 223 0 0 chr2 66213506 66213654 -184474200 - AluJb SINE Alu -160 152 5 233 277 0 36 chr2 66213790 66213873 -184473981 + LTR67 LTR ERVL 478 557 0 8668 40 0 0 chr2 66215415 66217234 -184470620 - L1PA4 LINE L1 -8 6147 4329 556 0 0 0 chr2 66217234 66217301 -184470553 + L1P LINE L1 2775 2841 -3305 40473 39 23 2 chr2 66217323 66223338 -184464516 + L1PA3 LINE L1 7 6155 0 11429 35 1 1 chr2 66223353 66224826 -184463028 + L1P LINE L1 2827 4299 -1847 180 0 0 0 chr2 66225304 66225324 -184462530 + (TTA)n Simple_repeat Simple_repeat 3 22 0 371 297 39 25 chr2 66228564 66228850 -184459004 + L1M4 LINE L1 2522 2811 -3335 201 74 0 0 chr2 66228850 66228877 -184458977 + (CA)n Simple_repeat Simple_repeat 2 28 0 886 233 5 15 chr2 66229042 66229293 -184458561 + MLT1E2 LTR MaLR 264 414 -91 28844 112 16 56 chr2 66229327 66231211 -184456643 - L1PA7 LINE L1 -1 6153 4194 2015 85 48 7 chr2 66231211 66231523 -184456331 - AluY SINE Alu 0 323 1 28844 112 16 56 chr2 66231523 66236051 -184451803 - L1PA7 LINE L1 -1960 4194 15 365 272 18 9 chr2 66236054 66236168 -184451686 + MLT1E2 LTR MaLR 512 626 0 619 177 27 14 chr2 66236181 66236328 -184451526 + MLT1E2-int LTR MaLR 15 163 -1208 1167 221 39 186 chr2 66236330 66236703 -184451151 + MLT1E2-int LTR MaLR 379 563 -808 2109 122 10 7 chr2 66236703 66236998 -184450856 + AluSc SINE Alu 1 296 -13 1167 221 39 186 chr2 66236998 66237461 -184450393 + MLT1E2-int LTR MaLR 563 1092 -279 588 282 6 6 chr2 66237655 66237825 -184450029 + ERVL LTR ERVL 2852 3021 -2743 10227 46 2 116 chr2 66237827 66239388 -184448466 - SVA Other Other -2 1384 2 531 57 19 47 chr2 66239393 66239499 -184448355 + (GGGAGA)n Simple_repeat Simple_repeat 1 103 0 715 179 34 50 chr2 66239499 66239678 -184448176 + MLT1E2-int LTR MaLR 1077 1252 -119 203 394 10 0 chr2 66240097 66240201 -184447653 - MIR SINE MIR -64 144 40 5580 172 30 31 chr2 66240360 66241086 -184446768 + L1MB2 LINE L1 4039 4765 -1406 2852 131 18 18 chr2 66241086 66241544 -184446310 - LTR22A LTR ERVK 0 458 1 5580 172 30 31 chr2 66241544 66242745 -184445109 + L1MB2 LINE L1 4765 5968 -203 1899 176 3 3 chr2 66242745 66243052 -184444802 + AluJb SINE Alu 1 307 -5 5580 172 30 31 chr2 66243052 66243254 -184444600 + L1MB2 LINE L1 5968 6169 -2 23 33 0 0 chr2 66243405 66243435 -184444419 + AT_rich Low_complexity Low_complexity 1 30 0 249 333 57 21 chr2 66244034 66244175 -184443679 - MER5B DNA MER1_type -2 176 31 588 206 22 67 chr2 66244175 66244355 -184443499 + L1MB7 LINE L1 5998 6169 -15 211 221 15 29 chr2 66244482 66244550 -184443304 + A-rich Low_complexity Low_complexity 2 68 0 1800 163 0 20 chr2 66244743 66245076 -184442778 - AluJo SINE Alu 0 327 1 307 278 52 100 chr2 66245189 66245538 -184442316 + L1MC/D LINE L1 3505 3836 -2310 466 339 71 45 chr2 66245572 66245633 -184442221 + L1MC/D LINE L1 3813 3871 -2275 2077 128 0 7 chr2 66245633 66245922 -184441932 + AluSq SINE Alu 1 287 -26 466 339 71 45 chr2 66245922 66246196 -184441658 + L1MC/D LINE L1 3871 4157 -1989 30066 111 12 39 chr2 66246316 66252626 -184435228 + L1PA7 LINE L1 12 6147 -7 323 269 105 53 chr2 66252631 66252802 -184435052 + L1MC/D LINE L1 4243 4422 -1724 978 164 0 18 chr2 66252856 66253027 -184434827 + AluSg/x SINE Alu 142 309 -1 189 0 0 0 chr2 66253122 66253143 -184434711 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 627 115 0 0 chr2 66253143 66253230 -184434624 - AluSp/q SINE Alu -32 281 195 1277 129 0 0 chr2 66253230 66253408 -184434446 - AluSg/x SINE Alu -59 253 76 545 261 93 39 chr2 66253416 66253933 -184433921 + L1MC/D LINE L1 4624 5168 -978 522 281 83 69 chr2 66253990 66254530 -184433324 + L1MC/D LINE L1 5269 5814 -594 225 211 0 0 chr2 66255828 66255880 -184431974 + GA-rich Low_complexity Low_complexity 3 54 0 2185 130 0 0 chr2 66256029 66256329 -184431525 - AluSq SINE Alu -13 300 1 262 234 97 45 chr2 66257283 66257437 -184430417 - MARNA DNA Mariner -398 188 27 524 180 140 0 chr2 66257519 66257669 -184430185 - L1MD3 LINE L1 0 7995 7825 26890 47 2 0 chr2 66257669 66263808 -184424046 - L1PA4 LINE L1 -6 6149 2 3673 233 41 10 chr2 66263882 66264806 -184423048 - L1MD2 LINE L1 -194 6165 5215 727 126 0 67 chr2 66265903 66266022 -184421832 + FRAM SINE Alu 56 166 -10 227 100 0 25 chr2 66266022 66266062 -184421792 + (GGA)n Simple_repeat Simple_repeat 1 39 0 343 250 0 0 chr2 66266208 66266276 -184421578 + L1ME LINE L1 5510 5577 -544 435 270 121 35 chr2 66266470 66266644 -184421210 - MIR SINE MIR -6 256 68 402 219 0 0 chr2 66266643 66266716 -184421138 + L2 LINE L2 3190 3262 -51 * 1476 162 109 11 chr2 66266724 66266990 -184420864 - AluJb SINE Alu -20 292 1 30 27 0 0 chr2 66267297 66267334 -184420520 + AT_rich Low_complexity Low_complexity 1 37 0 7167 60 1 9 chr2 66267892 66269474 -184418380 + L1PA8A LINE L1 4538 6118 -13 459 295 128 40 chr2 66269474 66270057 -184417797 + L1M4 LINE L1 4046 4703 -1443 2191 116 3 0 chr2 66270234 66270528 -184417326 + AluSx SINE Alu 1 295 -17 1858 165 3 7 chr2 66270766 66271063 -184416791 + AluJb SINE Alu 2 297 -15 285 319 0 0 chr2 66271128 66271200 -184416654 + L2 LINE L2 3238 3309 -4 610 148 78 70 chr2 66273030 66273172 -184414682 - L2 LINE L2 0 3313 3171 1093 172 61 0 chr2 66273625 66273823 -184414031 + L1PA16 LINE L1 5956 6165 -1 196 323 6 89 chr2 66274119 66274205 -184413649 - L2 LINE L2 -6 3307 3238 1436 184 53 17 chr2 66274205 66274504 -184413350 + AluJb SINE Alu 1 310 -2 196 323 6 89 chr2 66274504 66274575 -184413279 - L2 LINE L2 -75 3238 3163 3045 197 12 39 chr2 66274778 66275346 -184412508 - MLT2B3 LTR ERVL 0 554 2 29 28 0 0 chr2 66275432 66275468 -184412386 + AT_rich Low_complexity Low_complexity 1 36 0 878 221 113 0 chr2 66275885 66276116 -184411738 + MIR SINE MIR 6 262 0 1694 167 0 18 chr2 66276158 66276440 -184411414 + AluJo SINE Alu 1 277 -35 1870 79 0 0 chr2 66276440 66276666 -184411188 - AluSq SINE Alu -12 301 75 2365 99 0 6 chr2 66276748 66277060 -184410794 - AluY SINE Alu -1 310 1 209 284 18 73 chr2 66277212 66277321 -184410533 - L2 LINE L2 -10 3303 3201 345 259 54 18 chr2 66277922 66278034 -184409820 + LTR16C LTR ERVL 214 329 -162 317 303 76 14 chr2 66278686 66278831 -184409023 - MIR3 SINE MIR -48 160 7 321 26 0 0 chr2 66280492 66280530 -184407324 + (TG)n Simple_repeat Simple_repeat 2 39 0 439 351 48 18 chr2 66281045 66281213 -184406641 + MER91A DNA MER1_type 24 196 0 42494 54 13 5 chr2 66282057 66288158 -184399696 + L1PA4 LINE L1 11 6153 -2 1044 270 106 11 chr2 66288396 66288763 -184399091 - MLT1I LTR MaLR -7 402 1 563 231 67 26 chr2 66289415 66289598 -184398256 + MLT1J2 LTR MaLR 69 277 -169 1745 164 45 7 chr2 66289675 66289962 -184397892 - AluSx SINE Alu -14 298 1 1856 156 9 19 chr2 66291550 66291865 -184395989 + AluJb SINE Alu 1 312 0 4017 218 161 77 chr2 66292633 66292757 -184395097 - HAL1 LINE L1 -625 1882 1770 962 226 11 6 chr2 66292757 66292934 -184394920 - MER45A DNA AcHobo 0 178 1 4017 218 161 77 chr2 66292934 66293867 -184393987 - HAL1 LINE L1 -737 1770 917 2400 121 47 16 chr2 66293867 66294231 -184393623 - THE1C LTR MaLR 0 375 1 4017 218 161 77 chr2 66294231 66294872 -184392982 - HAL1 LINE L1 -1590 917 32 4236 156 50 3 chr2 66294872 66295545 -184392309 - MER44D DNA MER2_type 0 705 1 4017 218 161 77 chr2 66295545 66295574 -184392280 - HAL1 LINE L1 -2475 32 7 317 206 16 0 chr2 66296703 66296766 -184391088 + MIR SINE MIR 84 147 -115 2207 102 0 3 chr2 66297068 66297361 -184390493 - AluSx SINE Alu -16 296 5 23 33 0 0 chr2 66298710 66298740 -184389114 + AT_rich Low_complexity Low_complexity 1 30 0 364 287 139 24 chr2 66298777 66298946 -184388908 - MIR SINE MIR -60 148 1 266 342 25 0 chr2 66299351 66299471 -184388383 + L2 LINE L2 2651 2773 -541 719 261 169 27 chr2 66300276 66300687 -184387167 - L1ME4a LINE L1 -189 5932 5475 213 216 0 0 chr2 66301256 66301293 -184386561 + (CA)n Simple_repeat Simple_repeat 1 37 0 415 335 0 0 chr2 66301905 66302060 -184385794 + MER66-int LTR ERV1 6106 6260 -416 198 262 196 19 chr2 66302156 66302263 -184385591 + L2 LINE L2 3180 3305 -8 318 50 0 0 chr2 66303076 66303116 -184384738 + (TG)n Simple_repeat Simple_repeat 1 40 0 421 277 61 14 chr2 66303494 66303642 -184384212 + MIR SINE MIR 36 190 -72 374 296 128 54 chr2 66303944 66304541 -184383313 + L2 LINE L2 2660 3308 -5 324 258 62 0 chr2 66304604 66304701 -184383153 + CT-rich Low_complexity Low_complexity 3 105 0 2024 118 35 0 chr2 66304704 66304991 -184382863 - AluSx SINE Alu -15 297 1 590 214 14 7 chr2 66305899 66306044 -184381810 - MER104 DNA Tc2 -5 175 30 347 324 54 27 chr2 66306069 66306217 -184381637 + MIR SINE MIR 13 164 -98 1485 168 92 3 chr2 66306663 66306967 -184380887 + L1MB7 LINE L1 5854 6184 0 618 132 0 0 chr2 66307165 66307256 -184380598 - AluSp/q SINE Alu -8 305 215 408 292 73 15 chr2 66309081 66309218 -184378636 - MIR3 SINE MIR -34 174 30 345 246 93 87 chr2 66309808 66310097 -184377757 + L1ME4a LINE L1 5830 6120 -1 255 408 89 0 chr2 66310140 66310297 -184377557 - MIR SINE MIR -86 176 6 180 180 120 40 chr2 66310807 66310857 -184376997 - MIR3 SINE MIR -26 182 129 2761 133 54 0 chr2 66311077 66311483 -184376371 - MSTA LTR MaLR 0 428 1 407 234 23 39 chr2 66312465 66312593 -184375261 - MIR SINE MIR -117 145 20 288 348 11 0 chr2 66313274 66313363 -184374491 + MIR3 SINE MIR 97 186 -22 332 307 86 100 chr2 66314949 66315320 -184372534 - L2 LINE L2 -91 3181 2816 368 143 0 14 chr2 66315448 66315518 -184372336 - LTR37B LTR ERV1 0 468 400 25 31 0 0 chr2 66316418 66316450 -184371404 + AT_rich Low_complexity Low_complexity 1 32 0 2352 102 0 3 chr2 66317318 66317621 -184370233 - AluSc SINE Alu -7 302 1 2990 161 17 19 chr2 66318063 66318603 -184369251 + L1MA7 LINE L1 5753 6291 0 355 204 19 39 chr2 66318610 66318713 -184369141 - LTR37B LTR ERV1 -51 417 317 855 98 15 30 chr2 66318807 66318939 -184368915 + L1PB1 LINE L1 6020 6149 -2 498 225 35 110 chr2 66319001 66319228 -184368626 - LTR37B LTR ERV1 -253 215 6 2048 135 3 10 chr2 66319256 66319560 -184368294 + AluSx SINE Alu 1 302 -10 377 286 94 66 chr2 66319564 66319990 -184367864 - L2 LINE L2 -667 2647 2210 1099 146 32 0 chr2 66320230 66320388 -184367466 + FAM SINE Alu 1 163 -12 182 336 112 9 chr2 66322424 66322531 -184365323 + L2 LINE L2 1998 2115 -1199 755 184 9 0 chr2 66324433 66324547 -184363307 + FLAM_A SINE Alu 1 115 -18 198 0 0 0 chr2 66324553 66324575 -184363279 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 581 220 10 8 chr2 66324657 66324806 -184363048 + L1MD3 LINE L1 6091 7994 -1 386 178 56 22 chr2 66324843 66324933 -184362921 + L1MC5 LINE L1 7833 7925 -36 1382 278 134 14 chr2 66324952 66325798 -184362056 - L1MEc LINE L1 -2610 3519 2573 23 0 0 0 chr2 66325862 66325885 -184361969 + AT_rich Low_complexity Low_complexity 1 23 0 2087 137 0 0 chr2 66325892 66326199 -184361655 - AluSx SINE Alu -5 307 1 976 296 132 31 chr2 66326222 66327726 -184360128 - L1MEc LINE L1 -3879 2431 776 1474 161 107 93 chr2 66327754 66328175 -184359679 + MSTB1 LTR MaLR 1 427 -5 781 305 26 50 chr2 66328180 66328597 -184359257 - L1MEc LINE L1 -5392 727 321 334 278 56 14 chr2 66329027 66329171 -184358683 - L1MEc LINE L1 -5968 151 2 1945 198 61 53 chr2 66329328 66329709 -184358145 - MLT1D LTR MaLR -7 498 111 1817 122 92 0 chr2 66329709 66329980 -184357874 + AluJo SINE Alu 1 296 -16 1945 198 61 53 chr2 66329980 66330092 -184357762 - MLT1D LTR MaLR -394 111 1 186 339 159 40 chr2 66330193 66330457 -184357397 + L2 LINE L2 2397 2721 -593 2113 131 0 25 chr2 66330457 66330777 -184357077 - AluJb SINE Alu 0 312 1 186 339 159 40 chr2 66330777 66330890 -184356964 + L2 LINE L2 2721 2819 -495 732 320 65 50 chr2 66331093 66331548 -184356306 - L2 LINE L2 -4 3268 2793 2539 115 47 68 chr2 66331548 66331991 -184355863 - MER61C LTR ERV1 0 434 1 732 320 65 50 chr2 66331991 66332053 -184355801 - L2 LINE L2 -479 2793 2733 578 273 127 40 chr2 66332325 66332600 -184355254 + LTR16C LTR ERVL 189 487 -4 278 322 142 8 chr2 66332630 66332897 -184354957 - L2 LINE L2 -1030 2284 1982 2000 84 7 44 chr2 66333247 66333543 -184354311 + LTR12 LTR ERV1 1 285 -429 291 222 33 22 chr2 66333544 66333634 -184354220 + LTR30 LTR ERV1 553 643 -79 695 121 0 0 chr2 66333637 66333736 -184354118 + LTR12 LTR ERV1 616 714 0 327 301 8 30 chr2 66334403 66334561 -184353293 + GA-rich Low_complexity Low_complexity 1 161 -1371 9175 64 4 0 chr2 66334561 66335628 -184352226 + MER11C LTR ERVK 1 1071 0 327 301 8 30 chr2 66335628 66335664 -184352190 + GA-rich Low_complexity Low_complexity 161 196 -1336 1707 146 48 24 chr2 66335664 66335958 -184351896 + AluJo SINE Alu 1 301 -11 327 301 8 30 chr2 66335958 66335970 -184351884 + GA-rich Low_complexity Low_complexity 196 1532 0 209 297 154 59 chr2 66336674 66336810 -184351044 - L2 LINE L2 -1456 1858 1736 213 39 0 0 chr2 66336810 66336836 -184351018 + (TG)n Simple_repeat Simple_repeat 2 27 0 209 297 154 59 chr2 66336836 66336972 -184350882 - L2 LINE L2 -1578 1736 1560 4039 106 67 79 chr2 66337138 66337901 -184349953 + LTR1 LTR ERV1 32 785 0 212 206 29 44 chr2 66338184 66338252 -184349602 + MIR SINE MIR 95 161 -101 216 318 0 0 chr2 66340377 66340443 -184347411 + L3b LINE CR1 1272 1337 -246 188 375 0 0 chr2 66341783 66341847 -184346007 - L3 LINE CR1 -1 1576 1513 327 337 99 17 chr2 66341872 66342044 -184345810 + MIR SINE MIR 17 202 -60 1742 167 10 26 chr2 66342064 66342370 -184345484 + AluJo SINE Alu 1 301 -11 573 294 61 112 chr2 66342404 66342833 -184345021 - L3 LINE CR1 -79 1498 1092 377 203 179 16 chr2 66342920 66343043 -184344811 - L1M4 LINE L1 -1949 4197 4055 358 309 16 8 chr2 66343424 66343614 -184344240 - L3 LINE CR1 -533 1044 798 2347 80 3 0 chr2 66343756 66344055 -184343799 + AluY SINE Alu 1 300 -11 563 317 56 46 chr2 66344096 66344402 -184343452 - L3 LINE CR1 -866 711 403 212 297 77 66 chr2 66344799 66344890 -184342964 - L3 LINE CR1 -1184 393 302 1751 153 20 20 chr2 66344943 66345243 -184342611 + AluJb SINE Alu 1 300 -12 2379 254 91 46 chr2 66345258 66347132 -184340722 + L1ME2 LINE L1 1082 3054 -3075 1695 186 0 7 chr2 66347132 66347442 -184340412 + AluJb SINE Alu 1 312 0 2379 254 91 46 chr2 66347442 66347524 -184340330 + L1ME2 LINE L1 3054 3131 -2998 41851 65 4 2 chr2 66347533 66353664 -184334190 + L1PA5 LINE L1 11 6153 -1 949 257 44 54 chr2 66353653 66353914 -184333940 + L1ME2 LINE L1 3121 3378 -2751 * 2240 117 3 0 chr2 66353914 66354212 -184333642 - AluSx SINE Alu -13 299 1 949 257 44 54 chr2 66354212 66354358 -184333496 + L1ME2 LINE L1 3378 3524 -2605 11783 126 102 38 chr2 66354460 66356552 -184331302 + Tigger1 DNA MER2_type 192 2418 0 1016 243 30 13 chr2 66356554 66356789 -184331065 - MER8 DNA MER2_type 0 239 1 338 301 94 24 chr2 66356842 66357055 -184330799 - L1M4 LINE L1 -3703 2443 2216 43603 35 22 2 chr2 66357329 66363356 -184324498 + L1PA2 LINE L1 1 6155 0 233 93 70 0 chr2 66363579 66363622 -184324232 + T-rich Low_complexity Low_complexity 3 48 0 1404 189 20 95 chr2 66363708 66363944 -184323910 - MLT1A1 LTR MaLR 0 365 168 2229 103 7 0 chr2 66363944 66364234 -184323620 - AluSx SINE Alu -20 292 1 1404 189 20 95 chr2 66364234 66364388 -184323466 - MLT1A1 LTR MaLR -197 168 4 227 328 34 76 chr2 66364998 66365117 -184322737 + L2 LINE L2 3200 3313 0 475 186 12 0 chr2 66367550 66367636 -184320218 + AluJb SINE Alu 120 206 -106 29 28 0 0 chr2 66367636 66367672 -184320182 + AT_rich Low_complexity Low_complexity 1 36 0 3094 223 52 45 chr2 66368196 66369403 -184318451 + L1ME2 LINE L1 3785 4982 -1165 741 195 8 0 chr2 66369403 66369531 -184318323 + FLAM_A SINE Alu 1 129 -4 3094 223 52 45 chr2 66369531 66369925 -184317929 + L1ME2 LINE L1 4982 5372 -775 2200 111 7 13 chr2 66369925 66370231 -184317623 - AluSx SINE Alu -7 305 2 3094 223 52 45 chr2 66370231 66370753 -184317101 + L1ME2 LINE L1 5372 6123 -24 797 220 116 131 chr2 66370854 66371372 -184316482 + MLT1F LTR MaLR 1 510 -32 211 213 0 0 chr2 66371396 66371461 -184316393 + (CATA)n Simple_repeat Simple_repeat 1 65 0 223 302 47 35 chr2 66371551 66371637 -184316217 - L2 LINE L2 0 3272 3186 375 320 149 39 chr2 66371653 66371962 -184315892 - L2 LINE L2 -954 2360 2018 230 105 123 18 chr2 66372648 66372705 -184315149 - L1ME4a LINE L1 -2 6119 6057 187 121 30 0 chr2 66372929 66372962 -184314892 - L2 LINE L2 0 3313 3280 202 330 19 19 chr2 66373058 66373164 -184314690 + L2 LINE L2 2748 2853 -461 204 211 88 18 chr2 66373402 66373459 -184314395 + L2 LINE L2 3161 3221 -92 21 36 0 0 chr2 66374255 66374283 -184313571 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 66374479 66374509 -184313345 + AT_rich Low_complexity Low_complexity 1 30 0 1132 121 0 0 chr2 66374998 66375155 -184312699 - Tigger1 DNA MER2_type -3 2415 2259 * 4491 103 42 65 chr2 66375153 66375933 -184311921 - Tigger1 DNA MER2_type -547 1871 1110 3719 142 36 5 chr2 66375966 66376599 -184311255 - Tigger1 DNA MER2_type -1600 818 166 4562 206 53 101 chr2 66376599 66378560 -184309294 + MER52A LTR ERV1 1 1755 0 628 162 19 0 chr2 66378564 66378669 -184309185 - Tigger1 DNA MER2_type -2253 165 59 943 194 72 103 chr2 66378673 66379050 -184308804 + MLT1D LTR MaLR 93 457 -48 250 264 178 8 chr2 66379132 66379261 -184308593 + L2 LINE L2 3163 3313 0 22 56 0 0 chr2 66380630 66380666 -184307188 + AT_rich Low_complexity Low_complexity 1 36 0 2285 96 3 3 chr2 66382057 66382358 -184305496 + AluSp SINE Alu 1 301 -12 285 282 73 64 chr2 66382381 66382491 -184305363 - MIR SINE MIR -56 152 42 35 54 0 0 chr2 66382799 66382855 -184304999 + AT_rich Low_complexity Low_complexity 1 56 0 2319 96 0 0 chr2 66382974 66383277 -184304577 - AluSg SINE Alu -7 303 1 1975 143 7 13 chr2 66383311 66383619 -184304235 + AluSx SINE Alu 1 306 -6 2247 79 0 30 chr2 66384176 66384480 -184303374 + AluSq SINE Alu 1 295 -18 2275 78 0 7 chr2 66384850 66385132 -184302722 + AluSx SINE Alu 1 280 -32 696 126 7 105 chr2 66385163 66385306 -184302548 + AluJb SINE Alu 3 131 -181 207 88 0 0 chr2 66385647 66385681 -184302173 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2057 143 0 3 chr2 66385690 66385998 -184301856 - AluSx SINE Alu -5 307 1 808 231 0 0 chr2 66386003 66386159 -184301695 - FRAM SINE Alu -20 156 1 192 216 137 20 chr2 66387269 66387320 -184300534 + L3 LINE CR1 910 966 -611 3135 255 75 43 chr2 66387441 66388760 -184299094 + L1ME1 LINE L1 34 1394 -5002 240 284 0 0 chr2 66388772 66388839 -184299015 + L1ME1 LINE L1 1518 1584 -4812 572 256 87 12 chr2 66388887 66389129 -184298725 + L1ME1 LINE L1 1731 1990 -4406 3122 231 61 41 chr2 66389148 66389943 -184297911 + L1ME1 LINE L1 4271 5049 -1186 2077 123 0 13 chr2 66389943 66390243 -184297611 + AluSq SINE Alu 1 296 -17 3122 231 61 41 chr2 66390243 66390516 -184297338 + L1ME1 LINE L1 5049 5315 -920 1496 200 10 30 chr2 66390516 66390811 -184297043 + AluJo SINE Alu 1 289 -23 3122 231 61 41 chr2 66390811 66391656 -184296198 + L1ME1 LINE L1 5315 6230 -5 28 29 0 0 chr2 66391789 66391824 -184296030 + AT_rich Low_complexity Low_complexity 1 35 0 403 429 12 0 chr2 66392036 66392276 -184295578 + L3 LINE CR1 1019 1261 -316 2256 106 3 7 chr2 66392283 66392586 -184295268 + AluSx SINE Alu 1 302 -10 191 125 25 0 chr2 66392586 66392626 -184295228 + (TA)n Simple_repeat Simple_repeat 1 41 0 28 61 0 0 chr2 66394287 66394336 -184293518 + AT_rich Low_complexity Low_complexity 1 49 0 1161 195 4 8 chr2 66394440 66394696 -184293158 - L1MB7 LINE L1 -19 6165 5911 931 233 61 4 chr2 66394895 66395140 -184292714 + L1MEd LINE L1 587 845 -5274 567 274 138 17 chr2 66395179 66395817 -184292037 + L1MEd LINE L1 921 1746 -744 15312 209 32 35 chr2 66396797 66398397 -184289457 + L1PA15 LINE L1 1079 2681 -4135 1788 154 185 6 chr2 66398397 66398760 -184289094 - MSTA LTR MaLR 0 428 1 15312 209 32 35 chr2 66398760 66400577 -184287277 + L1PA15 LINE L1 2681 4501 -2315 2119 119 0 29 chr2 66400577 66400889 -184286965 + AluSx SINE Alu 1 303 -9 15312 209 32 35 chr2 66400889 66401397 -184286457 + L1PA15 LINE L1 4501 5009 -1807 405 0 0 0 chr2 66401397 66401442 -184286412 + (CA)n Simple_repeat Simple_repeat 2 46 0 15312 209 32 35 chr2 66401442 66403266 -184284588 + L1PA15 LINE L1 5009 6815 -1 21 0 0 0 chr2 66403269 66403290 -184284564 + AT_rich Low_complexity Low_complexity 1 21 0 261 104 0 75 chr2 66403291 66403358 -184284496 + (GGAAA)n Simple_repeat Simple_repeat 4 65 0 332 256 45 39 chr2 66403913 66404069 -184283785 - L1M4 LINE L1 -6370 172 16 2473 78 3 0 chr2 66404451 66404760 -184283094 + AluSp SINE Alu 1 310 -3 326 141 0 16 chr2 66404829 66404893 -184282961 + (CA)n Simple_repeat Simple_repeat 2 64 0 421 294 68 14 chr2 66404910 66405056 -184282798 - MIR SINE MIR -108 154 1 347 175 63 0 chr2 66405435 66405498 -184282356 + FLAM_A SINE Alu 19 85 -48 1620 171 3 25 chr2 66405532 66405818 -184282036 + AluJb SINE Alu 1 280 -32 24 0 0 0 chr2 66407556 66407580 -184280274 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr2 66408735 66408763 -184279091 + AT_rich Low_complexity Low_complexity 1 28 0 329 307 102 7 chr2 66408784 66408921 -184278933 - MLT1J LTR MaLR -4 507 358 588 210 36 22 chr2 66409051 66409189 -184278665 - MLT1J LTR MaLR -368 143 4 1301 200 48 11 chr2 66409306 66409576 -184278278 + AluJo SINE Alu 1 280 -32 717 264 6 0 chr2 66409895 66410069 -184277785 + MER96 DNA MER1_type 1 175 0 541 277 35 0 chr2 66410757 66410898 -184276956 + MER96 DNA MER1_type? 3 148 -27 1067 92 0 0 chr2 66410902 66411043 -184276811 - AluSg/x SINE Alu 0 312 172 6093 140 2 70 chr2 66411052 66411810 -184276044 - L1P LINE L1 -815 5331 4686 1946 109 87 0 chr2 66411810 66412086 -184275768 - AluSg SINE Alu -10 300 1 6093 140 2 70 chr2 66412086 66412557 -184275297 - L1P LINE L1 -1460 4686 4185 493 163 0 0 chr2 66412562 66412648 -184275206 + L1P LINE L1 4115 4200 -1946 332 205 99 123 chr2 66412658 66412749 -184275105 + L1M4 LINE L1 2750 2837 -3309 2024 91 8 0 chr2 66412749 66413012 -184274842 + AluSg SINE Alu 1 265 -45 332 205 99 123 chr2 66413012 66413091 -184274763 + L1M4 LINE L1 2837 2916 -3230 22 0 0 0 chr2 66413519 66413541 -184274313 + AT_rich Low_complexity Low_complexity 1 22 0 26 64 0 0 chr2 66414537 66414584 -184273270 + AT_rich Low_complexity Low_complexity 1 47 0 2085 137 0 3 chr2 66415612 66415911 -184271943 + AluSx SINE Alu 1 298 -14 298 319 110 16 chr2 66415959 66416141 -184271713 - L2 LINE L2 -1 3312 3114 210 219 0 0 chr2 66416223 66416264 -184271590 + GA-rich Low_complexity Low_complexity 6 46 0 227 342 80 36 chr2 66416294 66416547 -184271307 - L2 LINE L2 -239 3033 2765 831 182 30 18 chr2 66416614 66416779 -184271075 + FRAM SINE Alu 1 161 -15 252 0 0 0 chr2 66416779 66416807 -184271047 + (GA)n Simple_repeat Simple_repeat 1 28 0 204 40 0 0 chr2 66416812 66416837 -184271017 + (CAGG)n Simple_repeat Simple_repeat 4 28 0 832 179 226 16 chr2 66416875 66417127 -184270727 + L1ME1 LINE L1 5844 6148 -18 378 0 0 0 chr2 66417129 66417171 -184270683 + (CAT)n Simple_repeat Simple_repeat 2 43 0 203 333 104 45 chr2 66417428 66417737 -184270117 - L2 LINE L2 -564 2750 2424 380 162 0 0 chr2 66417774 66417848 -184270006 + L1MB2 LINE L1 6098 6171 0 204 275 200 50 chr2 66417849 66417929 -184269925 - L2 LINE L2 -19 3253 3162 486 282 97 32 chr2 66418056 66418272 -184269582 - L2 LINE L2 -337 2977 2748 1062 287 120 27 chr2 66418317 66418801 -184269053 + L2 LINE L2 1472 2000 -1314 1503 264 111 16 chr2 66418816 66419385 -184268469 - L1MC4a LINE L1 -1644 6164 5542 448 272 91 97 chr2 66419387 66419696 -184268158 + L2 LINE L2 2190 2496 -818 504 256 33 0 chr2 66419700 66419821 -184268033 + MER3 DNA MER1_type 9 133 -76 583 303 131 8 chr2 66419822 66420066 -184267788 - L2 LINE L2 -356 2958 2685 441 291 27 40 chr2 66420337 66420574 -184267280 + L2 LINE L2 2961 3313 0 181 253 12 12 chr2 66420574 66420657 -184267197 + GA-rich Low_complexity Low_complexity 3 85 0 1604 174 13 39 chr2 66422183 66422488 -184265366 + AluJo SINE Alu 3 299 -13 183 80 0 0 chr2 66422529 66422554 -184265300 + (TA)n Simple_repeat Simple_repeat 2 26 0 1874 166 3 3 chr2 66423537 66423833 -184264021 + AluJb SINE Alu 5 300 -12 25 0 0 0 chr2 66425271 66425296 -184262558 + AT_rich Low_complexity Low_complexity 1 25 0 1654 179 7 17 chr2 66425331 66425622 -184262232 + AluJo SINE Alu 1 288 -24 290 0 75 0 chr2 66425622 66425662 -184262192 + (GGAGAA)n Simple_repeat Simple_repeat 1 43 0 210 147 0 0 chr2 66426014 66426048 -184261806 - L2 LINE L2 -221 3051 3018 335 288 20 41 chr2 66426252 66426398 -184261456 - MIR3 SINE MIR -39 169 27 526 305 139 32 chr2 66426678 66427022 -184260832 - L2 LINE L2 -4 3309 2929 635 323 93 34 chr2 66427039 66427393 -184260461 - L2 LINE L2 -214 3058 2670 2164 113 3 0 chr2 66427393 66427684 -184260170 + AluSx SINE Alu 1 292 -20 635 323 93 34 chr2 66427684 66427810 -184260044 - L2 LINE L2 -602 2670 2553 1339 255 39 33 chr2 66427840 66428326 -184259528 - L1M4 LINE L1 -1034 5112 4624 4322 170 31 28 chr2 66428416 66429254 -184258600 - L1MD1 LINE L1 -2 6240 5397 1549 210 68 11 chr2 66429254 66429606 -184258248 - MLT1A2 LTR MaLR -2 372 1 4322 170 31 28 chr2 66429606 66429720 -184258134 - L1MD1 LINE L1 -845 5397 5285 394 309 0 18 chr2 66429750 66429860 -184257994 + MER20 DNA MER1_type 4 111 -108 2377 234 95 18 chr2 66429865 66430715 -184257139 - L1MD1 LINE L1 -2555 3591 2676 318 203 0 27 chr2 66430747 66430821 -184257033 + L2 LINE L2 3235 3306 -7 487 103 26 0 chr2 66430934 66431012 -184256842 - L1PB4 LINE L1 -13 6143 6064 1746 158 3 14 chr2 66431047 66431332 -184256522 - AluJb SINE Alu -30 282 1 2089 121 13 19 chr2 66431591 66431905 -184255949 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 66432297 66432322 -184255532 + AT_rich Low_complexity Low_complexity 1 25 0 236 333 204 0 chr2 66432355 66432448 -184255406 + L2 LINE L2 3197 3308 -5 196 276 81 46 chr2 66432497 66432584 -184255270 + MIR SINE MIR 52 141 -67 704 226 0 0 chr2 66433033 66433170 -184254684 + MIR SINE MIR 84 220 -42 2206 127 0 0 chr2 66433305 66433612 -184254242 - AluSx SINE Alu -5 307 1 2058 130 0 0 chr2 66434131 66434408 -184253446 + AluSx SINE Alu 12 288 -24 21 36 0 0 chr2 66434523 66434551 -184253303 + AT_rich Low_complexity Low_complexity 1 28 0 180 318 16 16 chr2 66435098 66435161 -184252693 + MIR3 SINE MIR 121 183 -25 333 165 165 0 chr2 66436550 66436629 -184251225 + L1ME1 LINE L1 6070 6161 -5 235 313 15 8 chr2 66437409 66437543 -184250311 + L1M4 LINE L1 4525 4659 -1487 29 0 0 0 chr2 66437557 66437586 -184250268 + AT_rich Low_complexity Low_complexity 1 29 0 750 183 0 0 chr2 66437890 66438010 -184249844 + FLAM_A SINE Alu 1 120 -13 30 59 0 0 chr2 66438019 66438070 -184249784 + AT_rich Low_complexity Low_complexity 1 51 0 2083 131 0 3 chr2 66438160 66438457 -184249397 + AluSx SINE Alu 1 296 -16 263 213 73 6 chr2 66438545 66438709 -184249145 + (TA)n Simple_repeat Simple_repeat 1 175 0 223 204 27 70 chr2 66438642 66438828 -184249026 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 * 1445 164 17 0 chr2 66438828 66439059 -184248795 - MER7A DNA MER2_type -3 334 100 563 141 0 0 chr2 66439068 66439146 -184248708 + AluJb SINE Alu 208 285 -27 249 33 0 0 chr2 66439146 66439176 -184248678 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 517 206 33 0 chr2 66439176 66439268 -184248586 - MER7A DNA MER2_type -252 94 2 239 264 14 83 chr2 66439355 66439427 -184248427 - MIR SINE MIR -188 74 8 409 235 61 0 chr2 66439592 66439690 -184248164 - LTR40c LTR ERVL -361 104 1 2124 131 0 0 chr2 66439749 66440047 -184247807 - AluSx SINE Alu -14 298 1 380 153 0 0 chr2 66440612 66440671 -184247183 - Charlie1 DNA MER1_type -1 2760 2702 10702 173 84 28 chr2 66440674 66442513 -184245341 + L1MB2 LINE L1 19 1754 -4628 1934 150 0 20 chr2 66442513 66442819 -184245035 - AluSx SINE Alu -12 300 1 10702 173 84 28 chr2 66442819 66443014 -184244840 + L1MB2 LINE L1 1754 1937 -4445 2098 133 3 0 chr2 66443014 66443314 -184244540 + AluJb SINE Alu 1 301 -11 10702 173 84 28 chr2 66443314 66443520 -184244334 + L1MB2 LINE L1 1937 2130 -4252 1764 200 86 15 chr2 66443520 66443746 -184244108 - Tigger2a DNA MER2_type -2274 434 226 2180 107 0 0 chr2 66443746 66444037 -184243817 + AluSg SINE Alu 2 292 -18 1764 200 86 15 chr2 66444037 66444215 -184243639 - Tigger2a DNA MER2_type -2482 226 1 10702 173 84 28 chr2 66444215 66444410 -184243444 + L1MB2 LINE L1 2130 2595 -3787 5706 244 46 24 chr2 66444440 66446028 -184241826 + L1MA5A LINE L1 4 1363 -5426 10087 158 50 37 chr2 66446066 66447297 -184240557 + L1MA5A LINE L1 3607 4821 -2118 239 175 0 0 chr2 66447297 66447337 -184240517 + LTR23 LTR ERV1 320 359 -78 10087 158 50 37 chr2 66447337 66449357 -184238497 + L1MA5A LINE L1 4821 6939 0 1813 243 57 12 chr2 66449343 66449993 -184237861 + L1MB2 LINE L1 2599 3277 -3105 * 8576 210 28 26 chr2 66450474 66451815 -184236039 + L1MB2 LINE L1 3272 4623 -1796 1756 186 3 6 chr2 66451815 66452126 -184235728 + AluJb SINE Alu 1 310 -2 8576 210 28 26 chr2 66452126 66453392 -184234462 + L1MB2 LINE L1 4623 5884 -535 1313 192 39 0 chr2 66453404 66453633 -184234221 + Tigger7 DNA MER2_type 9 246 -2241 392 193 0 140 chr2 66453666 66453750 -184234104 + Tigger7 DNA MER2_type 2389 2455 -32 1849 174 0 0 chr2 66453750 66454044 -184233810 + AluSg SINE Alu 4 297 -13 392 193 0 140 chr2 66454044 66454073 -184233781 + Tigger7 DNA MER2_type 2455 2486 -1 2597 140 81 16 chr2 66454076 66454522 -184233332 + L1MB2 LINE L1 5883 6365 -42 2171 117 7 0 chr2 66454522 66454821 -184233033 + AluSx SINE Alu 1 301 -11 2597 140 81 16 chr2 66454821 66454867 -184232987 + L1MB2 LINE L1 6365 6407 0 2544 156 119 14 chr2 66454871 66455500 -184232354 - Charlie1 DNA MER1_type -43 2718 2024 1241 250 127 66 chr2 66455650 66456317 -184231537 - L1ME3A LINE L1 -208 5962 5255 848 261 92 21 chr2 66456843 66456898 -184230956 - L1ME3A LINE L1 -1587 4559 4509 2268 84 0 7 chr2 66456898 66457195 -184230659 + AluSc SINE Alu 1 295 -14 198 0 0 0 chr2 66457195 66457217 -184230637 + (TA)n Simple_repeat Simple_repeat 2 23 0 848 261 92 21 chr2 66457217 66457593 -184230261 - L1ME3A LINE L1 -1636 4510 4096 956 265 99 13 chr2 66457696 66458349 -184229505 - L1ME3A LINE L1 -2199 3947 3106 22 0 0 0 chr2 66458528 66458550 -184229304 + AT_rich Low_complexity Low_complexity 1 22 0 452 256 241 5 chr2 66459097 66459292 -184228562 + MIR SINE MIR 9 249 -13 309 360 171 27 chr2 66459909 66460167 -184227687 - L2 LINE L2 -837 2477 2183 183 156 0 0 chr2 66460659 66460691 -184227163 + GA-rich Low_complexity Low_complexity 2 33 0 282 214 14 43 chr2 66460788 66460858 -184226996 - MIR SINE MIR 0 262 195 697 243 8 160 chr2 66460861 66461120 -184226734 - L2 LINE L2 -5 3308 3162 2126 122 3 3 chr2 66461120 66461423 -184226431 - AluSg SINE Alu -7 303 1 697 243 8 160 chr2 66461423 66461670 -184226184 - L2 LINE L2 -151 3162 2879 480 207 0 0 chr2 66462275 66462362 -184225492 - MIR SINE MIR -82 180 94 24 67 0 0 chr2 66463762 66463807 -184224047 + AT_rich Low_complexity Low_complexity 1 45 0 2511 72 3 0 chr2 66464945 66465251 -184222603 + AluSp SINE Alu 1 307 -6 198 71 0 0 chr2 66465468 66465496 -184222358 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1779 136 108 9 chr2 66466152 66466468 -184221386 + MER7A DNA MER2_type 1 345 -1 1669 156 138 43 chr2 66466767 66467230 -184220624 + Charlie4a DNA MER1_type 1 507 -1 23 0 0 0 chr2 66467251 66467274 -184220580 + AT_rich Low_complexity Low_complexity 1 23 0 1278 175 0 0 chr2 66467403 66467626 -184220228 + AluJo SINE Alu 86 308 -4 628 225 8 0 chr2 66471146 66471266 -184216588 + FLAM_A SINE Alu 8 128 -14 2456 223 71 40 chr2 66471672 66472040 -184215814 - HsTC2a DNA Tc2 -1156 744 389 2073 218 63 8 chr2 66472040 66472532 -184215322 + Charlie1b DNA MER1_type 5 523 0 2292 94 3 0 chr2 66472537 66472835 -184215019 - AluSp SINE Alu -14 299 1 2456 223 71 40 chr2 66472835 66473179 -184214675 - HsTC2a DNA Tc2 -1514 386 4 2192 107 0 26 chr2 66473365 66473675 -184214179 - AluSx SINE Alu -10 302 1 488 301 90 12 chr2 66473762 66473928 -184213926 + MIR3 SINE MIR 30 208 0 653 207 41 12 chr2 66474184 66474353 -184213501 + MER104 DNA MER2_type 3 176 -4 313 328 176 15 chr2 66474406 66474610 -184213244 - MIR SINE MIR -18 244 8 897 238 31 45 chr2 66474659 66474787 -184213067 + L1ME4a LINE L1 5543 5671 -450 2408 69 7 0 chr2 66474787 66475092 -184212762 + AluSp SINE Alu 1 307 -6 897 238 31 45 chr2 66475092 66475253 -184212601 + L1ME4a LINE L1 5671 5828 -293 1009 148 18 6 chr2 66475255 66475424 -184212430 + AluJb SINE Alu 137 307 -5 314 188 72 0 chr2 66475430 66475499 -184212355 + L1ME4a LINE L1 5815 5888 -233 264 261 99 27 chr2 66475508 66475619 -184212235 + L1ME4a LINE L1 6000 6118 -3 266 208 181 0 chr2 66475752 66475824 -184212030 - MIR3 SINE MIR -5 203 119 642 230 145 15 chr2 66475834 66476034 -184211820 - MIR SINE MIR -3 259 34 203 286 36 48 chr2 66476063 66476147 -184211707 - MIR SINE MIR -102 106 24 592 118 21 0 chr2 66476300 66476393 -184211461 + L1MB7 LINE L1 6036 6130 -54 25 0 0 0 chr2 66477121 66477146 -184210708 + AT_rich Low_complexity Low_complexity 1 25 0 419 258 40 16 chr2 66477931 66478055 -184209799 - MIR SINE MIR -134 128 2 741 170 16 110 chr2 66478381 66478418 -184209436 - MLT1G LTR MaLR -2 588 549 768 132 29 52 chr2 66478418 66478554 -184209300 + FLAM_C SINE Alu 1 133 0 741 170 16 110 chr2 66478554 66478698 -184209156 - MLT1G LTR MaLR -41 549 424 727 181 11 110 chr2 66478676 66478858 -184208996 - MLT1G LTR MaLR -253 277 114 * 1295 225 72 58 chr2 66478885 66479440 -184208414 + L1M4 LINE L1 3679 4241 -1905 2189 67 0 4 chr2 66479492 66479762 -184208092 - AluY SINE Alu -8 303 35 2740 244 64 13 chr2 66479781 66480547 -184207307 + L1ME2 LINE L1 5354 6158 -6 495 195 63 6 chr2 66480578 66480737 -184207117 + L1M4 LINE L1 4383 4550 -1596 4806 158 35 24 chr2 66480740 66481633 -184206221 - L1MB1 LINE L1 -1 6167 5265 376 326 135 45 chr2 66482005 66482486 -184205368 + L2 LINE L2 2733 3272 0 209 246 77 120 chr2 66482488 66482671 -184205183 + L3b LINE CR1 1277 1451 -132 1793 121 38 0 chr2 66483626 66483891 -184203963 + AluSx SINE Alu 21 295 -17 1917 146 20 3 chr2 66483895 66484197 -184203657 + AluSx SINE Alu 3 309 -3 186 43 0 0 chr2 66491609 66491632 -184196222 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 66491854 66491876 -184195978 + AT_rich Low_complexity Low_complexity 1 22 0 402 259 128 27 chr2 66493442 66493629 -184194225 + MIR SINE MIR 45 249 -13 314 228 11 43 chr2 66495291 66495383 -184192471 + MIR SINE MIR 5 93 -169 1731 160 3 42 chr2 66495570 66495883 -184191971 + AluJb SINE Alu 3 303 -9 436 191 118 73 chr2 66496078 66496188 -184191666 - FLAM_A SINE Alu -21 121 7 367 257 121 0 chr2 66496218 66496358 -184191496 - L1ME4a LINE L1 -9 6112 5956 330 294 75 0 chr2 66496396 66496556 -184191298 - L1MC5 LINE L1 -519 7442 7271 1496 246 85 76 chr2 66496723 66497313 -184190541 - MLT1G LTR MaLR 0 590 1 351 242 94 27 chr2 66497320 66497469 -184190385 - L1MC4 LINE L1 -780 7262 7104 1168 167 88 56 chr2 66497470 66497721 -184190133 + AluJb SINE Alu 1 259 -53 441 0 0 0 chr2 66497738 66497787 -184190067 + (CA)n Simple_repeat Simple_repeat 2 50 0 337 366 96 24 chr2 66498528 66499028 -184188826 + L2 LINE L2 2204 2739 -575 231 330 148 9 chr2 66499721 66499836 -184188018 - L2 LINE L2 -213 3059 2929 2364 80 0 7 chr2 66500052 66500351 -184187503 - AluSc SINE Alu -12 297 1 30 27 0 0 chr2 66501733 66501770 -184186084 + AT_rich Low_complexity Low_complexity 1 37 0 1972 136 48 27 chr2 66501975 66502305 -184185549 - MER1B DNA MER1_type 0 337 1 771 180 0 0 chr2 66502548 66502676 -184185178 + AluJ SINE Alu 2 129 -183 24 0 0 0 chr2 66502676 66502700 -184185154 + AT_rich Low_complexity Low_complexity 1 24 0 1089 172 6 0 chr2 66502770 66502944 -184184910 + AluJ SINE Alu 132 306 -6 495 261 104 43 chr2 66504076 66504287 -184183567 - MER58A DNA MER1_type 0 224 1 25 75 0 0 chr2 66505273 66505326 -184182528 + AT_rich Low_complexity Low_complexity 1 53 0 2239 92 0 3 chr2 66505399 66505692 -184182162 - AluSx SINE Alu -20 292 1 232 301 0 75 chr2 66507765 66507858 -184179996 + L2 LINE L2 3186 3271 -1 2186 106 13 0 chr2 66508282 66508585 -184179269 - AluSg SINE Alu -1 309 3 21 0 0 0 chr2 66509732 66509753 -184178101 + AT_rich Low_complexity Low_complexity 1 21 0 1665 160 46 0 chr2 66512831 66513112 -184174742 + AluJo SINE Alu 6 299 -13 22 35 0 0 chr2 66513112 66513141 -184174713 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 66514442 66514464 -184173390 + AT_rich Low_complexity Low_complexity 1 22 0 380 53 0 53 chr2 66515561 66515637 -184172217 + (TA)n Simple_repeat Simple_repeat 1 72 0 26 0 0 0 chr2 66517699 66517725 -184170129 + AT_rich Low_complexity Low_complexity 1 26 0 441 0 0 0 chr2 66519279 66519328 -184168526 + (TG)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr2 66519546 66519567 -184168287 + AT_rich Low_complexity Low_complexity 1 21 0 193 267 0 0 chr2 66519624 66519669 -184168185 - MIR3 SINE MIR -9 199 155 257 239 111 60 chr2 66519905 66520024 -184167830 - MIR SINE MIR -57 151 34 358 311 7 61 chr2 66520941 66521089 -184166765 - MIR3 SINE MIR -61 147 6 2643 183 44 2 chr2 66521181 66521723 -184166131 - L1MB5 LINE L1 -15 6159 5595 2206 117 0 10 chr2 66522264 66522572 -184165282 + AluSq SINE Alu 1 305 -8 640 236 38 91 chr2 66523390 66523653 -184164201 - MIR SINE MIR 0 262 14 192 152 0 0 chr2 66526249 66526282 -184161572 + C-rich Low_complexity Low_complexity 4 36 0 293 323 6 51 chr2 66526313 66526471 -184161383 + C-rich Low_complexity Low_complexity 5 155 0 873 54 0 0 chr2 66527166 66527277 -184160577 + (A)n Simple_repeat Simple_repeat 1 111 0 354 276 32 8 chr2 66527277 66527400 -184160454 + L1M4 LINE L1 3073 3198 -2948 380 187 30 15 chr2 66527681 66527815 -184160039 + A-rich Low_complexity Low_complexity 5 140 0 21 0 0 0 chr2 66527894 66527915 -184159939 + GC_rich Low_complexity Low_complexity 1 21 0 186 80 60 20 chr2 66528556 66528606 -184159248 + (CTCA)n Simple_repeat Simple_repeat 1 52 0 271 309 10 10 chr2 66528638 66528735 -184159119 + CT-rich Low_complexity Low_complexity 1 97 0 21 0 0 0 chr2 66579697 66579718 -184108136 + AT_rich Low_complexity Low_complexity 1 21 0 537 273 57 40 chr2 66580015 66580191 -184107663 - MER5A DNA MER1_type -5 184 6 21 57 0 0 chr2 66582000 66582035 -184105819 + AT_rich Low_complexity Low_complexity 1 35 0 26 64 0 0 chr2 66583867 66583914 -184103940 + AT_rich Low_complexity Low_complexity 1 47 0 1549 81 57 105 chr2 66584935 66585231 -184102623 - MER44D DNA MER2_type 0 609 58 250 227 15 61 chr2 66585400 66585466 -184102388 - MIR3 SINE MIR -38 170 108 198 0 0 0 chr2 66586339 66586361 -184101493 + (A)n Simple_repeat Simple_repeat 1 22 0 254 235 0 0 chr2 66588161 66588212 -184099642 + GA-rich Low_complexity Low_complexity 3 53 0 2340 76 7 0 chr2 66589894 66590185 -184097669 + AluSp SINE Alu 1 293 -20 585 216 0 0 chr2 66590701 66590842 -184097012 - FLAM_A SINE Alu 0 141 1 2106 110 0 35 chr2 66591610 66591927 -184095927 - AluSq SINE Alu -7 306 1 857 110 0 0 chr2 66592402 66592520 -184095334 - AluSq/x SINE Alu -195 118 1 23 54 0 0 chr2 66592794 66592831 -184095023 + AT_rich Low_complexity Low_complexity 1 37 0 1712 163 27 13 chr2 66593078 66593378 -184094476 + AluJo SINE Alu 1 304 -8 341 286 137 24 chr2 66594283 66594451 -184093403 - MER5A DNA MER1_type 0 189 3 334 270 174 9 chr2 66594499 66594614 -184093240 + MIR SINE MIR 3 136 -126 2181 102 7 3 chr2 66594629 66594924 -184092930 + AluSg SINE Alu 6 301 -9 411 137 0 42 chr2 66594924 66595019 -184092835 + (GGGAA)n Simple_repeat Simple_repeat 1 91 0 591 15 0 0 chr2 66595023 66595091 -184092763 + (GGAA)n Simple_repeat Simple_repeat 1 68 0 2108 132 0 22 chr2 66595103 66595240 -184092614 + AluSx SINE Alu 1 139 -173 2166 117 3 3 chr2 66595240 66595548 -184092306 + AluSg SINE Alu 1 308 -2 2108 132 0 22 chr2 66595548 66595729 -184092125 + AluSx SINE Alu 139 312 0 2363 97 3 0 chr2 66595864 66596174 -184091680 - AluSx SINE Alu -1 311 1 829 153 15 0 chr2 66596185 66596316 -184091538 - FLAM_A SINE Alu 0 133 1 2163 102 0 3 chr2 66596968 66597261 -184090593 - AluSg SINE Alu -17 293 2 220 19 19 75 chr2 66597460 66597513 -184090341 + (TCC)n Simple_repeat Simple_repeat 2 51 0 2199 111 7 0 chr2 66597513 66597811 -184090043 - AluSx SINE Alu -12 300 1 1895 151 0 3 chr2 66598088 66598380 -184089474 + AluSx SINE Alu 1 291 -21 1634 167 7 43 chr2 66599208 66599260 -184088594 + AluJo SINE Alu 11 63 -249 2242 104 7 0 chr2 66599260 66599568 -184088286 + AluSq SINE Alu 1 310 -3 1634 167 7 43 chr2 66599568 66599820 -184088034 + AluJo SINE Alu 63 304 -8 1665 171 53 0 chr2 66599925 66600206 -184087648 + AluJo SINE Alu 1 296 -16 1362 192 21 21 chr2 66600473 66600754 -184087100 - AluJo SINE Alu -27 285 5 498 17 0 0 chr2 66601491 66601550 -184086304 + (TG)n Simple_repeat Simple_repeat 2 60 0 827 251 55 17 chr2 66601604 66601841 -184086013 - MIR SINE MIR -10 252 6 376 326 0 0 chr2 66602273 66602371 -184085483 + MIR SINE MIR 14 111 -151 1966 139 45 40 chr2 66602874 66603116 -184084738 + L1MA8 LINE L1 5860 6107 -184 778 150 0 0 chr2 66603116 66603259 -184084595 - FLAM_C SINE Alu 0 143 1 1966 139 45 40 chr2 66603259 66603438 -184084416 + L1MA8 LINE L1 6107 6284 -7 651 189 16 0 chr2 66603636 66603763 -184084091 - FLAM_A SINE Alu -4 129 1 31 0 0 0 chr2 66603909 66603940 -184083914 + AT_rich Low_complexity Low_complexity 1 31 0 237 310 69 0 chr2 66604621 66604708 -184083146 + L2 LINE L2 3134 3226 -46 459 279 70 0 chr2 66604761 66604890 -184082964 - MIR SINE MIR -39 223 86 2199 102 10 7 chr2 66604934 66605227 -184082627 - AluSx SINE Alu -18 294 1 189 0 0 0 chr2 66605605 66605626 -184082228 + (CA)n Simple_repeat Simple_repeat 2 22 0 2225 102 0 13 chr2 66605684 66605987 -184081867 - AluY SINE Alu -12 299 1 2423 85 0 3 chr2 66605987 66606293 -184081561 - AluSx SINE Alu -6 306 1 1982 153 0 0 chr2 66606843 66607151 -184080703 + AluSx SINE Alu 1 308 -4 1025 51 0 15 chr2 66607306 66607443 -184080411 + L1PA5 LINE L1 6017 6151 -3 23 33 0 0 chr2 66607443 66607473 -184080381 + AT_rich Low_complexity Low_complexity 1 30 0 2383 75 3 0 chr2 66607483 66607789 -184080065 + AluY SINE Alu 1 307 -4 22 99 0 0 chr2 66611325 66611396 -184076458 + AT_rich Low_complexity Low_complexity 1 71 0 26 30 0 0 chr2 66611699 66611732 -184076122 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr2 66612952 66612974 -184074880 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 66614913 66614943 -184072911 + AT_rich Low_complexity Low_complexity 1 30 0 223 104 60 15 chr2 66615330 66615397 -184072457 + (TA)n Simple_repeat Simple_repeat 1 70 0 22 70 0 0 chr2 66617421 66617464 -184070390 + AT_rich Low_complexity Low_complexity 1 43 0 191 204 19 0 chr2 66617494 66617548 -184070306 + (TA)n Simple_repeat Simple_repeat 2 56 0 27 49 0 0 chr2 66618057 66618098 -184069756 + AT_rich Low_complexity Low_complexity 1 41 0 231 276 17 0 chr2 66618308 66618366 -184069488 + L3 LINE CR1 1519 1577 0 26 0 0 0 chr2 66618491 66618517 -184069337 + AT_rich Low_complexity Low_complexity 1 26 0 465 19 0 0 chr2 66619114 66619168 -184068686 + (T)n Simple_repeat Simple_repeat 1 54 0 229 214 18 18 chr2 66623425 66623481 -184064373 + CT-rich Low_complexity Low_complexity 3 58 0 347 272 0 11 chr2 66624139 66624231 -184063623 + CT-rich Low_complexity Low_complexity 2 92 0 219 107 71 0 chr2 66625830 66625886 -184061968 + (CGGGG)n Simple_repeat Simple_repeat 1 60 0 288 77 0 0 chr2 66628904 66628943 -184058911 + (TG)n Simple_repeat Simple_repeat 1 39 0 276 30 0 0 chr2 66631320 66631353 -184056501 + (CCA)n Simple_repeat Simple_repeat 1 33 0 275 120 0 20 chr2 66632316 66632366 -184055488 + (TA)n Simple_repeat Simple_repeat 2 50 0 216 70 53 70 chr2 66632649 66632706 -184055148 + A-rich Low_complexity Low_complexity 5 60 0 189 197 26 92 chr2 66634610 66634686 -184053168 + MIR SINE MIR 60 130 -132 23 33 0 0 chr2 66635056 66635086 -184052768 + GC_rich Low_complexity Low_complexity 1 30 0 261 57 0 0 chr2 66635167 66635202 -184052652 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 27 29 0 0 chr2 66637453 66637487 -184050367 + AT_rich Low_complexity Low_complexity 1 34 0 225 277 10 69 chr2 66637871 66637972 -184049882 + L2 LINE L2 2183 2277 -1037 606 200 69 6 chr2 66638030 66638190 -184049664 + L1MC5 LINE L1 7745 7914 -47 251 212 222 20 chr2 66639034 66639133 -184048721 - MARNA DNA Mariner -203 383 265 256 271 29 0 chr2 66639576 66639646 -184048208 + L2 LINE L2 3200 3271 -1 22 70 0 0 chr2 66639840 66639883 -184047971 + AT_rich Low_complexity Low_complexity 1 43 0 1829 165 0 108 chr2 66640064 66640471 -184047383 - MER47A DNA MER2_type -2 364 2 1699 254 57 31 chr2 66640472 66641268 -184046586 - L1ME3A LINE L1 -122 5999 5191 250 212 35 53 chr2 66641274 66641387 -184046467 - L1ME3A LINE L1 -1005 5141 5031 370 342 161 31 chr2 66641468 66642407 -184045447 + L2 LINE L2 2178 3240 -32 780 241 59 5 chr2 66643443 66643646 -184044208 + HAL1 LINE L1 2 215 -2292 1410 164 27 17 chr2 66643951 66644272 -184043582 + MER33 DNA MER1_type 1 310 -14 328 299 76 71 chr2 66644711 66644737 -184043117 + L2 LINE L2 1262 1286 -2028 1724 202 0 0 chr2 66644737 66645034 -184042820 - AluJb SINE Alu -15 297 1 328 299 76 71 chr2 66645034 66645204 -184042650 + L2 LINE L2 1286 1459 -1855 3173 112 33 29 chr2 66645221 66645745 -184042109 - MLT2A1 LTR ERVL 0 515 1 734 355 123 6 chr2 66645794 66646453 -184041401 + L2 LINE L2 1527 2262 -1052 723 263 66 65 chr2 66646781 66647324 -184040530 + MLT1H1 LTR MaLR 1 547 -8 1925 171 0 0 chr2 66647489 66647793 -184040061 - AluJo SINE Alu -8 304 1 329 245 0 20 chr2 66647975 66648077 -184039777 + MIR SINE MIR 85 184 -78 2382 110 135 33 chr2 66648081 66648199 -184039655 + L1PA16 LINE L1 5693 5798 -368 2449 68 0 0 chr2 66648199 66648491 -184039363 + AluY SINE Alu 1 292 -19 2382 110 135 33 chr2 66648491 66648796 -184039058 + L1PA16 LINE L1 5798 6157 -9 1800 153 7 17 chr2 66648853 66649141 -184038713 + AluJo SINE Alu 3 287 -25 1673 199 6 16 chr2 66649238 66649550 -184038304 + AluJo SINE Alu 3 311 -1 4935 184 36 47 chr2 66649636 66649686 -184038168 - L1MB3 LINE L1 -1 6182 6133 2160 128 0 0 chr2 66649686 66649982 -184037872 - AluSx SINE Alu -16 296 1 4935 184 36 47 chr2 66649982 66651713 -184036141 - L1MB3 LINE L1 -50 6133 4383 3696 146 32 34 chr2 66651713 66652050 -184035804 - L1MB2 LINE L1 -3 6168 5832 2509 78 0 13 chr2 66652050 66652359 -184035495 - AluY SINE Alu -6 305 1 3696 146 32 34 chr2 66652359 66652404 -184035450 - L1MB2 LINE L1 -339 5832 5788 217 0 0 57 chr2 66652404 66652439 -184035415 + (TA)n Simple_repeat Simple_repeat 1 33 0 3696 146 32 34 chr2 66652439 66652536 -184035318 - L1MB2 LINE L1 -383 5788 5692 1910 154 73 16 chr2 66652536 66652905 -184034949 - MLT1B LTR MaLR 0 390 1 3696 146 32 34 chr2 66652905 66653140 -184034714 - L1MB2 LINE L1 -479 5692 5453 4935 184 36 47 chr2 66653140 66653298 -184034556 - L1MB3 LINE L1 -1800 4383 4225 900 153 0 0 chr2 66653298 66653429 -184034425 - FLAM_C SINE Alu 0 133 3 4935 184 36 47 chr2 66653429 66653469 -184034385 - L1MB3 LINE L1 -1958 4225 4186 2142 164 5 16 chr2 66653469 66653848 -184034006 + THE1C LTR MaLR 1 375 0 4935 184 36 47 chr2 66653848 66654041 -184033813 - L1MB3 LINE L1 -1997 4186 4034 531 192 117 0 chr2 66654428 66654548 -184033306 + MER94 DNA DNA 1 134 0 37 0 0 0 chr2 66655588 66655625 -184032229 + AT_rich Low_complexity Low_complexity 1 37 0 1879 231 135 30 chr2 66656234 66656895 -184030959 - MER20B DNA MER1_type 0 783 54 2435 71 0 0 chr2 66656903 66657199 -184030655 - AluY SINE Alu -15 296 1 1855 139 52 0 chr2 66657220 66657514 -184030340 - AluJb SINE Alu 0 308 1 33 0 0 0 chr2 66657521 66657554 -184030300 + AT_rich Low_complexity Low_complexity 1 33 0 962 106 0 0 chr2 66657554 66657677 -184030177 - AluJb SINE Alu -189 123 1 5369 155 29 15 chr2 66658642 66659293 -184028561 - L1PA16 LINE L1 -20 6146 5506 2265 122 0 0 chr2 66659293 66659596 -184028258 - AluSg SINE Alu -7 303 1 5369 155 29 15 chr2 66659596 66660735 -184027119 - L1PA16 LINE L1 -660 5506 4340 2935 229 17 12 chr2 66660733 66661506 -184026348 - L1MB3 LINE L1 -2521 3625 2849 * 32884 34 1 0 chr2 66662869 66667550 -184020304 - L1PA3 LINE L1 0 6155 1471 388 309 94 13 chr2 66668800 66668949 -184018905 + MER91A DNA MER1_type 36 196 0 26 30 0 0 chr2 66669158 66669191 -184018663 + AT_rich Low_complexity Low_complexity 1 33 0 665 309 140 18 chr2 66669266 66669716 -184018138 + L2 LINE L2 2805 3309 -4 25 0 0 0 chr2 66669878 66669903 -184017951 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 66670087 66670109 -184017745 + AT_rich Low_complexity Low_complexity 1 22 0 363 338 143 4 chr2 66670305 66670542 -184017312 - L2 LINE L2 -1856 1458 1189 2290 227 82 33 chr2 66670554 66671401 -184016453 + L1MDa LINE L1 2090 2894 -3646 2336 116 0 0 chr2 66671401 66671711 -184016143 + AluSx SINE Alu 1 310 -2 2290 227 82 33 chr2 66671711 66671827 -184016027 + L1MDa LINE L1 2894 3003 -3537 1578 206 30 0 chr2 66671827 66672157 -184015697 - MER58B DNA MER1_type -1 340 1 2290 227 82 33 chr2 66672157 66672440 -184015414 + L1MDa LINE L1 3003 3411 -3129 2130 126 0 13 chr2 66672459 66672768 -184015086 - AluSx SINE Alu -7 305 1 4233 76 5 0 chr2 66672804 66673355 -184014499 + MER41A LTR ERV1 1 554 0 2308 77 0 42 chr2 66673373 66673683 -184014171 + AluSg SINE Alu 1 297 -13 2434 78 10 0 chr2 66673802 66674110 -184013744 - AluY SINE Alu 0 311 1 2123 117 0 0 chr2 66674747 66675069 -184012785 + AluSx SINE Alu 3 324 0 28 0 0 0 chr2 66675185 66675213 -184012641 + AT_rich Low_complexity Low_complexity 1 28 0 13227 206 48 25 chr2 66675225 66678075 -184009779 - L1MA4A LINE L1 -21 6984 4202 1957 161 7 0 chr2 66678075 66678385 -184009469 - AluSx SINE Alu 0 312 1 13227 206 48 25 chr2 66678385 66682281 -184005573 - L1MA4A LINE L1 -2803 4202 10 342 263 93 0 chr2 66682741 66682859 -184004995 + L1ME LINE L1 5549 5677 -444 24 0 0 0 chr2 66683054 66683078 -184004776 + AT_rich Low_complexity Low_complexity 1 24 0 523 122 154 0 chr2 66683165 66683288 -184004566 + L1MA4 LINE L1 5970 6111 -189 845 127 97 0 chr2 66683683 66683848 -184004006 + L1MA4 LINE L1 6116 6296 -4 32 43 0 0 chr2 66684041 66684087 -184003767 + AT_rich Low_complexity Low_complexity 1 46 0 2629 100 5 5 chr2 66684842 66685231 -184002623 + L1MA1 LINE L1 5910 6298 -4 22 35 0 0 chr2 66686169 66686198 -184001656 + AT_rich Low_complexity Low_complexity 1 29 0 1920 161 3 0 chr2 66686215 66686501 -184001353 + AluJb SINE Alu 5 291 -21 1039 72 0 0 chr2 66686703 66686828 -184001026 - AluSg/x SINE Alu -18 292 168 2290 90 0 3 chr2 66686861 66687150 -184000704 - AluSg SINE Alu -21 289 2 6191 168 40 24 chr2 66687160 66688151 -183999703 - L1MC1 LINE L1 -17 6316 5342 1886 57 0 0 chr2 66688151 66688378 -183999476 - AluY SINE Alu -3 308 82 6191 168 40 24 chr2 66688378 66688740 -183999114 - L1MC1 LINE L1 -991 5342 4987 2220 91 7 16 chr2 66688740 66689047 -183998807 - AluSq SINE Alu -9 304 1 6191 168 40 24 chr2 66689047 66689104 -183998750 - L1MC1 LINE L1 -1346 4987 4932 207 0 0 0 chr2 66689104 66689127 -183998727 + (TA)n Simple_repeat Simple_repeat 1 23 0 6191 168 40 24 chr2 66689127 66689758 -183998096 - L1MC1 LINE L1 -1401 4932 4233 4348 179 33 22 chr2 66689967 66690332 -183997522 - L1MB2 LINE L1 -7 6164 5805 279 0 0 0 chr2 66690332 66690363 -183997491 + (TG)n Simple_repeat Simple_repeat 2 32 0 4348 179 33 22 chr2 66690363 66691361 -183996493 - L1MB2 LINE L1 -366 5805 4787 191 61 30 0 chr2 66691364 66691397 -183996457 + (TA)n Simple_repeat Simple_repeat 1 34 0 2094 135 3 3 chr2 66691417 66691728 -183996126 - AluSx SINE Alu -1 311 1 2391 202 57 6 chr2 66691782 66692273 -183995581 - MER34 LTR ERV1 0 542 27 2185 108 0 23 chr2 66692857 66693163 -183994691 - AluSg SINE Alu -9 301 3 2222 97 0 26 chr2 66695721 66696030 -183991824 - AluY SINE Alu -10 301 1 1313 212 78 24 chr2 66696078 66696474 -183991380 - LTR40b LTR ERVL 0 462 1 1800 154 58 3 chr2 66696569 66696862 -183990992 - AluJo SINE Alu 0 312 4 23 0 0 0 chr2 66698045 66698068 -183989786 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 66698858 66698880 -183988974 + AT_rich Low_complexity Low_complexity 1 22 0 628 231 128 68 chr2 66698905 66699406 -183988448 - L1ME4a LINE L1 -18 6103 5573 505 286 61 14 chr2 66699894 66700041 -183987813 - MIR3 SINE MIR -1 207 54 570 252 0 0 chr2 66700669 66700788 -183987066 - FLAM_A SINE Alu -14 119 1 2118 110 0 16 chr2 66700799 66701107 -183986747 - AluSx SINE Alu -9 303 1 2060 142 3 0 chr2 66701133 66701428 -183986426 - AluJb SINE Alu -14 298 3 212 155 53 5 chr2 66701613 66701660 -183986194 - MIR SINE MIR -57 151 104 1692 170 12 46 chr2 66701856 66702179 -183985675 - AluJo SINE Alu 0 312 1 2377 86 0 10 chr2 66702318 66702619 -183985235 - AluSc SINE Alu -11 298 1 348 188 0 0 chr2 66702846 66702915 -183984939 + (TA)n Simple_repeat Simple_repeat 2 70 0 2121 114 3 0 chr2 66703054 66703343 -183984511 + AluSx SINE Alu 1 290 -22 3883 180 42 28 chr2 66703664 66703879 -183983975 - L1MB3 LINE L1 -2 6679 6469 2171 106 3 0 chr2 66703879 66704162 -183983692 - AluSp SINE Alu -27 286 3 3883 180 42 28 chr2 66704162 66704668 -183983186 - L1MB3 LINE L1 -212 6469 5972 236 125 0 0 chr2 66704668 66704700 -183983154 + U2 snRNA snRNA 1 32 -156 3883 180 42 28 chr2 66704700 66704902 -183982952 - L1MB3 LINE L1 -709 5972 5774 1856 168 36 3 chr2 66704902 66705235 -183982619 + MER2 DNA MER2_type 1 344 0 3883 180 42 28 chr2 66705235 66705874 -183981980 - L1MB3 LINE L1 -907 5774 5087 3437 253 68 39 chr2 66705871 66707027 -183980827 - L1MB3 LINE L1 -3478 3166 2045 * 2248 108 3 3 chr2 66707027 66707332 -183980522 - AluSx SINE Alu -7 305 1 3437 253 68 39 chr2 66707332 66708378 -183979476 - L1MB3 LINE L1 -4599 2045 806 1860 125 96 34 chr2 66708640 66708993 -183978861 + THE1C LTR MaLR 1 375 0 248 303 95 19 chr2 66709035 66709246 -183978608 - L1MB3 LINE L1 -6308 234 8 230 283 0 0 chr2 66709654 66709707 -183978147 + (CA)n Simple_repeat Simple_repeat 2 54 0 1966 148 0 0 chr2 66710041 66710338 -183977516 + AluJb SINE Alu 5 301 -11 2061 130 7 0 chr2 66710533 66710826 -183977028 - AluSx SINE Alu -17 295 1 1773 145 24 27 chr2 66710926 66711223 -183976631 - AluJo SINE Alu -10 302 7 201 133 0 0 chr2 66711586 66711616 -183976238 + (GA)n Simple_repeat Simple_repeat 1 30 0 21 57 0 0 chr2 66711635 66711670 -183976184 + AT_rich Low_complexity Low_complexity 1 35 0 5427 109 30 23 chr2 66711737 66712415 -183975439 - L1PA13 LINE L1 0 6163 5492 225 0 0 0 chr2 66712415 66712440 -183975414 + (TTG)n Simple_repeat Simple_repeat 2 26 0 5427 109 30 23 chr2 66712440 66713271 -183974583 - L1PA13 LINE L1 -671 5492 4644 747 289 65 14 chr2 66713291 66713582 -183974272 - L1ME LINE L1 -341 5780 5475 1996 138 16 40 chr2 66713601 66713648 -183974206 - L1PB1 LINE L1 -8 6143 6096 2345 70 7 3 chr2 66713648 66713947 -183973907 - AluY SINE Alu -10 301 2 1996 138 16 40 chr2 66713947 66714269 -183973585 - L1PB1 LINE L1 -55 6096 5783 270 303 0 0 chr2 66714274 66714363 -183973491 - L1MC4 LINE L1 -1340 6702 6614 * 329 219 49 0 chr2 66714285 66714367 -183973487 + L1MC4 LINE L1 6614 6699 -1343 270 0 0 0 chr2 66714367 66714397 -183973457 + (CA)n Simple_repeat Simple_repeat 2 31 0 12926 199 13 79 chr2 66714397 66716274 -183971580 - L1P5 LINE L1 -373 6494 4495 2336 94 3 0 chr2 66716274 66716573 -183971281 - AluSg SINE Alu -10 300 1 12926 199 13 79 chr2 66716573 66718014 -183969840 - L1P5 LINE L1 -2372 4495 2961 288 0 0 0 chr2 66718014 66718046 -183969808 + (TG)n Simple_repeat Simple_repeat 2 33 0 12926 199 13 79 chr2 66718046 66718163 -183969691 - L1P5 LINE L1 -3906 2961 2838 857 169 14 7 chr2 66718163 66718305 -183969549 - AluSg/x SINE Alu -26 286 144 12926 199 13 79 chr2 66718305 66719451 -183968403 - L1P5 LINE L1 -4029 2838 1963 352 0 0 0 chr2 66719456 66719495 -183968359 + (TTTTA)n Simple_repeat Simple_repeat 2 95 0 1396 138 111 12 chr2 66719495 66719748 -183968106 - AluSg SINE Alu -1 318 3 4719 188 180 9 chr2 66719751 66720903 -183966951 - L1P5 LINE L1 -4884 1979 631 4103 148 6 4 chr2 66720904 66721599 -183966255 - L1P LINE L1 -1495 4651 3956 1754 112 112 4 chr2 66721603 66721871 -183965983 - AluSc SINE Alu -12 297 1 267 279 49 16 chr2 66722031 66722153 -183965701 + L1MC4 LINE L1 7916 8041 -1 283 300 153 58 chr2 66722296 66722735 -183965119 - L2 LINE L2 -452 2862 2329 2151 126 3 0 chr2 66722883 66723185 -183964669 + AluSx SINE Alu 1 303 -9 957 133 0 20 chr2 66723403 66723536 -183964318 + AluJb SINE Alu 163 294 -18 1718 146 23 49 chr2 66723536 66723844 -183964010 - AluSx SINE Alu -12 300 1 957 133 0 20 chr2 66723844 66723860 -183963994 + AluJb SINE Alu 294 309 -3 392 189 61 91 chr2 66723926 66724058 -183963796 + L1MC4 LINE L1 6825 6952 -1090 261 0 0 0 chr2 66724058 66724087 -183963767 + (CA)n Simple_repeat Simple_repeat 2 30 0 1804 247 91 19 chr2 66724098 66724995 -183962859 + L1ME3A LINE L1 4994 5965 -205 1173 193 33 9 chr2 66724996 66725209 -183962645 + AluJo SINE Alu 75 292 -20 1169 146 18 58 chr2 66725476 66725702 -183962152 + MER20 DNA MER1_type 3 219 0 809 259 44 0 chr2 66725708 66725913 -183961941 + MIR SINE MIR 36 249 -13 1593 192 23 10 chr2 66726412 66726714 -183961140 - AluJo SINE Alu -6 306 1 410 356 30 0 chr2 66727016 66727148 -183960706 - MIR SINE MIR -80 182 47 39 74 0 0 chr2 66727288 66727369 -183960485 + AT_rich Low_complexity Low_complexity 1 81 0 359 180 31 130 chr2 66727377 66727469 -183960385 - L1MC5 LINE L1 -52 7909 7838 2111 124 10 0 chr2 66727469 66727768 -183960086 - AluSx SINE Alu -10 302 1 359 180 31 130 chr2 66727768 66727836 -183960018 - L1MC5 LINE L1 -123 7838 7765 21 57 0 0 chr2 66727879 66727914 -183959940 + AT_rich Low_complexity Low_complexity 1 35 0 427 173 53 0 chr2 66728383 66728458 -183959396 + MER5A DNA MER1_type 28 106 -83 6455 226 118 44 chr2 66729372 66730736 -183957118 - L1ME1 LINE L1 -31 6529 5268 926 214 78 0 chr2 66730736 66730942 -183956912 + MER58A DNA MER1_type 3 224 0 6455 226 118 44 chr2 66730942 66731191 -183956663 - L1ME1 LINE L1 -1292 5268 5039 204 40 0 0 chr2 66731191 66731216 -183956638 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2069 99 0 11 chr2 66731216 66731499 -183956355 - AluSx SINE Alu -32 280 1 6455 226 118 44 chr2 66731499 66731650 -183956204 - L1ME1 LINE L1 -1521 5039 4901 2291 98 0 7 chr2 66731650 66731955 -183955899 + AluSx SINE Alu 1 303 -9 6455 226 118 44 chr2 66731955 66733660 -183954194 - L1ME1 LINE L1 -1659 4901 2798 361 271 29 7 chr2 66733644 66733784 -183954070 - L1ME1 LINE L1 -4457 2083 1941 * 1259 208 142 69 chr2 66733768 66734051 -183953803 - L1ME1 LINE L1 -4921 1619 1358 1856 139 0 61 chr2 66734051 66734361 -183953493 + AluJb SINE Alu 1 291 -21 1259 208 142 69 chr2 66734361 66734447 -183953407 - L1ME1 LINE L1 -5182 1358 1280 712 158 7 50 chr2 66734447 66734586 -183953268 - FLAM_A SINE Alu 0 133 1 1259 208 142 69 chr2 66734586 66734936 -183952918 - L1ME1 LINE L1 -5260 1280 890 254 313 12 12 chr2 66735335 66735418 -183952436 - L1ME1 LINE L1 -6437 103 21 771 228 106 15 chr2 66735746 66736007 -183951847 + L1MC4 LINE L1 6973 7220 -741 777 144 40 0 chr2 66786025 66786150 -183901704 + FRAM SINE Alu 35 164 -12 4388 69 126 2 chr2 66786216 66786828 -183901026 - LTR12 LTR ERV1 0 688 1 3119 106 7 5 chr2 66786828 66787270 -183900584 - HERV9 LTR ERV1 0 8399 7957 2231 101 0 26 chr2 66787370 66787678 -183900176 - AluSq SINE Alu -13 300 1 3104 151 22 32 chr2 66787680 66788618 -183899236 + L1M1 LINE L1 4892 5819 -481 775 234 138 66 chr2 66788725 66789385 -183898469 - L1ME LINE L1 -4738 1523 763 2043 161 0 0 chr2 66789623 66789934 -183897920 + AluSx SINE Alu 1 311 -1 1031 69 0 0 chr2 66789948 66790079 -183897775 + AluY SINE Alu 1 131 -180 5964 215 66 83 chr2 66790199 66790736 -183897118 - L1 LINE L1 -1241 4905 4361 2130 129 3 7 chr2 66790736 66791045 -183896809 - AluSx SINE Alu -4 308 1 5964 215 66 83 chr2 66791045 66792708 -183895146 - L1 LINE L1 -1785 4361 2757 2315 86 3 0 chr2 66792708 66793000 -183894854 - AluSx SINE Alu -19 293 1 5964 215 66 83 chr2 66793000 66793552 -183894302 - L1 LINE L1 -3389 2757 2197 11646 168 56 15 chr2 66794204 66795699 -183892155 + L1M4c LINE L1 26 1656 -4726 1972 129 10 23 chr2 66795699 66796009 -183891845 + AluSx SINE Alu 1 306 -6 11646 168 56 15 chr2 66796009 66797022 -183890832 + L1M4c LINE L1 1656 2626 -3756 1594 227 169 30 chr2 66797124 66798300 -183889554 + L1MEc LINE L1 1763 3046 -3169 * 2704 212 132 14 chr2 66798299 66799086 -183888768 + L1MC4 LINE L1 7021 7900 -142 232 180 0 0 chr2 66799090 66799140 -183888714 + L1MC4 LINE L1 7987 8036 -6 1894 160 44 36 chr2 66800372 66800759 -183887095 + MLT1B LTR MaLR 1 390 0 1307 162 82 110 chr2 66800989 66801452 -183886402 - LTR7 LTR ERV1 0 450 1 953 179 30 0 chr2 66801475 66801643 -183886211 + AluJo SINE Alu 122 294 -18 303 223 126 10 chr2 66801660 66801763 -183886091 - L1M4 LINE L1 -3395 2751 2637 22 35 0 0 chr2 66801867 66801896 -183885958 + AT_rich Low_complexity Low_complexity 1 29 0 886 230 55 58 chr2 66801953 66802297 -183885557 + MER2 DNA MER2_type 2 344 0 583 205 33 8 chr2 66802420 66802542 -183885312 - FLAM_A SINE Alu -8 125 1 1212 218 14 0 chr2 66802622 66802838 -183885016 + MER58A DNA MER1_type 6 224 0 250 182 127 0 chr2 66802882 66802937 -183884917 + Tigger4(Zombi) DNA MER2_type 8 69 -2662 919 251 112 3 chr2 66803127 66803474 -183884380 + L1MEc LINE L1 1665 2049 -4347 480 139 152 0 chr2 66803475 66803554 -183884300 - Tigger7 DNA MER2_type -1 2486 2396 * 2937 168 11 26 chr2 66803553 66804082 -183883772 - Tigger7 DNA MER2_type -212 521 1 761 211 72 88 chr2 66804139 66804348 -183883506 + L1MEc LINE L1 2081 2248 -3967 2256 96 0 13 chr2 66804348 66804651 -183883203 + AluY SINE Alu 1 299 -12 761 211 72 88 chr2 66804651 66804890 -183882964 + L1MEc LINE L1 2248 2489 -3726 270 235 0 0 chr2 66804891 66804959 -183882895 + L1MEc LINE L1 2539 2606 -3609 3781 187 27 19 chr2 66805482 66806562 -183881292 - L1MA9 LINE L1 -272 6040 4956 229 183 17 17 chr2 66806554 66806614 -183881240 - L1MA9 LINE L1 -3140 3006 2947 * 1590 187 53 0 chr2 66806651 66806934 -183880920 - AluJb SINE Alu -9 303 6 411 295 84 35 chr2 66806992 66807277 -183880577 - HAL1b LINE L1 -825 523 225 725 244 33 67 chr2 66807301 66807600 -183880254 - L1ME1 LINE L1 -7 6159 5871 671 213 142 22 chr2 66807590 66807858 -183879996 - L1ME1 LINE L1 -221 5945 5646 * 275 138 35 0 chr2 66807867 66807925 -183879929 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 1350 206 48 36 chr2 66808047 66808532 -183879322 - L1ME1 LINE L1 -535 5631 5145 643 221 29 7 chr2 66808549 66808689 -183879165 - FLAM_C SINE Alu 0 143 1 511 268 46 38 chr2 66808694 66808907 -183878947 - L1ME1 LINE L1 -1037 5109 4892 5551 65 22 11 chr2 66808907 66809664 -183878190 + MER4E LTR ERV1 1 766 0 511 268 46 38 chr2 66809664 66809689 -183878165 - L1ME1 LINE L1 -1254 4892 4869 779 251 55 36 chr2 66809706 66810013 -183877841 - L1ME1 LINE L1 -1398 4748 4436 427 106 48 96 chr2 66810013 66810117 -183877737 - MER4B LTR ERV1 0 610 512 2362 137 24 102 chr2 66810297 66810960 -183876894 + MER4A LTR ERV1 1 465 0 892 171 19 6 chr2 66811006 66811164 -183876690 - AluJb SINE Alu -16 296 137 2014 230 63 9 chr2 66811169 66811280 -183876574 - L1ME1 LINE L1 -1772 4374 4270 4108 80 9 4 chr2 66811280 66811831 -183876023 + MER41A LTR ERV1 1 554 0 2014 230 63 9 chr2 66811831 66812262 -183875592 - L1ME1 LINE L1 -1876 4270 3803 313 163 58 23 chr2 66812303 66812389 -183875465 - L1MB3 LINE L1 -4 6179 6091 21 0 0 0 chr2 66813228 66813249 -183874605 + AT_rich Low_complexity Low_complexity 1 21 0 411 274 167 28 chr2 66813943 66814158 -183873696 + L1MC/D LINE L1 5311 5555 -2253 2066 114 7 3 chr2 66814176 66814465 -183873389 - AluSg SINE Alu -20 290 1 416 237 93 10 chr2 66814484 66814581 -183873273 + MER58A DNA MER1_type 1 105 -119 * 3965 144 105 43 chr2 66814575 66815435 -183872419 + Cheshire DNA MER1_type 1505 2417 -3 229 269 0 15 chr2 66815509 66815576 -183872278 + L1MC/D LINE L1 5688 5753 -2055 475 235 105 0 chr2 66815687 66815840 -183872014 - L1ME1 LINE L1 -2391 3755 3587 257 250 98 49 chr2 66815855 66816099 -183871755 + L1M4 LINE L1 4430 4685 -1461 216 135 0 0 chr2 66816152 66816189 -183871665 + (A)n Simple_repeat Simple_repeat 1 37 0 496 179 0 0 chr2 66816436 66816514 -183871340 - FLAM_A SINE Alu -47 95 18 1780 213 50 11 chr2 66816873 66817254 -183870600 + MSTD LTR MaLR 1 396 0 187 279 0 0 chr2 66817516 66817559 -183870295 - L2 LINE L2 -6 3307 3265 701 244 41 12 chr2 66817559 66817731 -183870123 + MER69A DNA AcHobo 1 177 0 612 195 34 13 chr2 66817812 66817961 -183869893 + L1 LINE L1 2210 2361 -3785 946 46 0 0 chr2 66817970 66818079 -183869775 + AluY SINE Alu 1 109 -202 3808 213 74 10 chr2 66818079 66819165 -183868689 + L1 LINE L1 2371 3525 -2621 777 171 14 14 chr2 66819278 66819418 -183868436 - FLAM_C SINE Alu -3 140 1 519 172 28 0 chr2 66819426 66819606 -183868248 + L1MA7 LINE L1 6133 6288 -3 1280 133 13 10 chr2 66821119 66821365 -183866489 + L1MA7 LINE L1 1 606 -6603 7302 172 40 29 chr2 66821467 66822364 -183865490 + L1MA7 LINE L1 4664 5550 -1803 2120 117 0 17 chr2 66822364 66822642 -183865212 + AluSg SINE Alu 1 275 -35 189 0 0 0 chr2 66822642 66822663 -183865191 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 2120 117 0 17 chr2 66822663 66822683 -183865171 + AluSg SINE Alu 275 294 -16 7302 172 40 29 chr2 66822683 66824288 -183863566 + L1MA7 LINE L1 5550 7182 -171 23 33 0 0 chr2 66824290 66824320 -183863534 + AT_rich Low_complexity Low_complexity 1 30 0 276 281 107 16 chr2 66824422 66824543 -183863311 + L1M2 LINE L1 1210 1341 -5868 7998 206 70 11 chr2 66824559 66826768 -183861086 + L1M2 LINE L1 1180 3701 -3507 348 24 0 0 chr2 66826768 66826809 -183861045 + (CA)n Simple_repeat Simple_repeat 2 42 0 7998 206 70 11 chr2 66826809 66828315 -183859539 + L1M2 LINE L1 3701 5117 -2091 229 270 0 0 chr2 66828635 66828698 -183859156 + L1PB1 LINE L1 38 100 -6763 13004 181 34 18 chr2 66828798 66831331 -183856523 + L1PB1 LINE L1 1399 3889 -2978 2147 83 4 0 chr2 66831331 66831596 -183856258 + AluY SINE Alu 1 266 -45 13004 181 34 18 chr2 66831596 66832935 -183854919 + L1PB1 LINE L1 3889 5205 -1662 2781 73 0 3 chr2 66832935 66833291 -183854563 - THE1A LTR MaLR 0 355 1 13004 181 34 18 chr2 66833291 66834769 -183853085 + L1PB1 LINE L1 5205 6867 0 1448 125 38 45 chr2 66834772 66835013 -183852841 + L1 LINE L1 4548 4788 -1358 2434 81 0 0 chr2 66835013 66835311 -183852543 + AluSg SINE Alu 4 301 -9 1448 125 38 45 chr2 66835311 66835382 -183852472 + L1 LINE L1 4788 4858 -1288 22 35 0 0 chr2 66835453 66835482 -183852372 + AT_rich Low_complexity Low_complexity 1 29 0 864 132 21 79 chr2 66835594 66835783 -183852071 + L1PA15 LINE L1 5985 6162 -3 287 267 74 0 chr2 66835802 66835937 -183851917 + HAL1 LINE L1 1428 1572 -935 937 211 0 0 chr2 66835963 66836172 -183851682 - L1P LINE L1 -1002 5144 4936 1635 81 29 0 chr2 66836402 66836611 -183851243 - AluY SINE Alu -96 215 1 235 315 0 0 chr2 66836636 66836725 -183851129 + L1M4 LINE L1 2676 2764 -3382 398 255 107 5 chr2 66836785 66837001 -183850853 + L1M4 LINE L1 2870 3107 -3039 * 1446 247 98 27 chr2 66837000 66838011 -183849843 + L1MEc LINE L1 1543 2585 -3630 250 203 0 17 chr2 66838164 66838223 -183849631 + (TA)n Simple_repeat Simple_repeat 1 58 0 351 0 0 0 chr2 66838226 66838265 -183849589 + (TG)n Simple_repeat Simple_repeat 2 40 0 422 218 0 18 chr2 66838735 66838845 -183849009 - L1MA10 LINE L1 -2 6332 6225 5324 83 95 1 chr2 66838845 66839600 -183848254 + LTR12 LTR ERV1 1 826 0 12294 112 15 19 chr2 66839600 66842335 -183845519 + HERV9 LTR ERV1 1 2870 -5529 183 229 197 0 chr2 66842335 66842396 -183845458 + L2 LINE L2 355 427 -2887 12294 112 15 19 chr2 66842396 66842665 -183845189 + HERV9 LTR ERV1 2870 3139 -5260 4608 94 0 11 chr2 66842673 66843340 -183844514 + HERV9 LTR ERV1 4081 4740 -3659 433 222 6 6 chr2 66843353 66843515 -183844339 + GA-rich Low_complexity Low_complexity 1 162 0 5971 191 16 28 chr2 66843999 66845477 -183842377 + L1MEc LINE L1 3341 4799 -1416 2073 167 114 2 chr2 66845481 66845894 -183841960 - LTR32 LTR ERVL 0 471 13 660 265 20 20 chr2 66845894 66846098 -183841756 - HERVL32 LTR ERVL 0 3418 3215 1045 306 58 15 chr2 66846202 66846751 -183841103 - PRIMA41-int LTR ERV1 -448 7308 6736 1232 178 102 69 chr2 66846751 66847167 -183840687 + MLT2A2 LTR ERVL 1 426 -128 378 315 37 32 chr2 66847458 66847849 -183840005 - HERVL18 LTR ERVL -1832 3526 3197 1056 238 70 16 chr2 66847886 66848201 -183839653 - HERVL18 LTR ERVL -205 3213 2882 3464 128 115 0 chr2 66848203 66848752 -183839102 + LTR9 LTR ERV1 1 612 0 602 90 30 20 chr2 66848763 66848863 -183838991 + HUERS-P3 LTR ERV1 11 111 -8808 2543 158 35 24 chr2 66848865 66849357 -183838497 + HUERS-P3 LTR ERV1 273 769 -8150 * 11672 134 20 26 chr2 66849354 66851389 -183836465 + HUERS-P3b LTR ERV1 619 2642 -4776 444 110 96 0 chr2 66851390 66851463 -183836391 - LTR8 LTR ERV1 -251 440 361 2441 191 77 43 chr2 66851557 66852211 -183835643 - HERVL18 LTR ERVL -563 2855 2180 2832 131 10 18 chr2 66852211 66852721 -183835133 + L1PB4 LINE L1 5281 5786 -370 11143 84 33 9 chr2 66852722 66854337 -183833517 + L1PA7 LINE L1 1 1654 -4807 15369 81 6 1 chr2 66854338 66857338 -183830516 + L1PA7 LINE L1 3453 6465 -4 1742 189 51 3 chr2 66857338 66857700 -183830154 + L1PB4 LINE L1 5769 6156 0 1079 212 115 44 chr2 66857741 66857816 -183830038 + L1M4 LINE L1 2426 2494 -3652 713 205 0 0 chr2 66857816 66857938 -183829916 + FLAM_A SINE Alu 4 125 -8 1079 212 115 44 chr2 66857938 66858357 -183829497 + L1M4 LINE L1 2494 2955 -3191 203 275 0 0 chr2 66858357 66858397 -183829457 + MIR SINE MIR 22 61 -201 440 296 97 11 chr2 66858556 66858742 -183829112 - MIR SINE MIR -15 247 46 736 194 104 0 chr2 66858897 66859126 -183828728 + MER58B DNA MER1_type 2 289 -52 982 192 0 24 chr2 66859132 66859299 -183828555 + AluJo SINE Alu 122 284 -28 180 0 0 0 chr2 66859317 66859337 -183828517 + (CAAG)n Simple_repeat Simple_repeat 2 21 0 239 128 0 0 chr2 66859337 66859376 -183828478 + MER58B DNA MER1_type 292 330 -11 205 396 11 0 chr2 66859391 66859482 -183828372 + L2 LINE L2 2715 2806 -508 321 26 0 0 chr2 66862288 66862326 -183825528 + (TA)n Simple_repeat Simple_repeat 2 39 0 2223 90 10 0 chr2 66862326 66862615 -183825239 - AluSc SINE Alu -17 292 1 1678 148 36 14 chr2 66862620 66862897 -183824957 - AluJb SINE Alu -17 295 13 227 319 113 36 chr2 66862981 66863282 -183824572 + L2 LINE L2 1987 2310 -1004 303 249 140 75 chr2 66863796 66864200 -183823654 + L1MEd LINE L1 561 1024 -5095 1342 206 27 40 chr2 66864200 66864501 -183823353 - AluJo SINE Alu -15 297 1 303 249 140 75 chr2 66864501 66864747 -183823107 + L1MEd LINE L1 1024 1253 -4866 1740 177 0 3 chr2 66864827 66865131 -183822723 + AluSx SINE Alu 20 312 0 3480 162 19 133 chr2 66865146 66865636 -183822218 + L1P4 LINE L1 4156 4700 -1465 1371 98 0 8 chr2 66865636 66865862 -183821992 + AluSq SINE Alu 1 298 -15 3480 162 19 133 chr2 66865862 66866833 -183821021 + L1P4 LINE L1 4700 5623 -542 2836 236 90 48 chr2 66866954 66867650 -183820204 - L1M4c LINE L1 -3943 2703 2037 1878 119 14 25 chr2 66867650 66867927 -183819927 - AluSx SINE Alu -19 293 20 2836 236 90 48 chr2 66867927 66869758 -183818096 - L1M4c LINE L1 -4609 2037 2 521 317 66 33 chr2 66869799 66870042 -183817812 + LTR16B LTR ERVL 17 267 -197 445 344 69 9 chr2 66870084 66870430 -183817424 + HERV16 LTR ERVL 266 632 -4364 1242 278 45 0 chr2 66870491 66870887 -183816967 + HERV16 LTR ERVL 733 1146 -3850 454 348 32 0 chr2 66871047 66871234 -183816620 + LTR16B LTR ERVL 2 194 -270 699 325 47 18 chr2 66871244 66871696 -183816158 - L1MEc LINE L1 -5918 478 14 1014 254 11 34 chr2 66871728 66871890 -183815964 - MIR SINE MIR 0 262 107 924 158 68 0 chr2 66871890 66872067 -183815787 - MER53 DNA DNA 0 189 1 1014 254 11 34 chr2 66872067 66872172 -183815682 - MIR SINE MIR -155 107 1 354 308 131 51 chr2 66872716 66872759 -183815095 - MIR SINE MIR -1 261 223 22 0 0 0 chr2 66872759 66872781 -183815073 + AT_rich Low_complexity Low_complexity 1 22 0 354 308 131 51 chr2 66872781 66872953 -183814901 - MIR SINE MIR -39 223 6 29 47 0 0 chr2 66873998 66874041 -183813813 + AT_rich Low_complexity Low_complexity 1 43 0 3639 57 2 0 chr2 66874629 66875087 -183812767 + L1PA6 LINE L1 5692 6150 -4 22 0 0 0 chr2 66875536 66875558 -183812296 + AT_rich Low_complexity Low_complexity 1 22 0 2161 124 0 0 chr2 66875615 66875920 -183811934 - AluSx SINE Alu 0 305 1 5725 118 25 14 chr2 66875920 66876941 -183810913 - L1PA16 LINE L1 -12 6154 5121 8097 141 17 3 chr2 66877628 66879271 -183808583 + L1PA12 LINE L1 106 2323 -5258 227 247 78 0 chr2 66879252 66879329 -183808525 - L1MC4 LINE L1 -1346 6696 6614 * 288 130 0 0 chr2 66879329 66879375 -183808479 + (TG)n Simple_repeat Simple_repeat 2 47 0 6818 237 11 16 chr2 66879377 66880235 -183807619 + L1P LINE L1 2712 3573 -4011 2106 122 3 29 chr2 66880235 66880547 -183807307 + AluSx SINE Alu 1 304 -8 6818 237 11 16 chr2 66880547 66881442 -183806412 + L1P LINE L1 3573 4456 -3128 5942 87 45 7 chr2 66881442 66882892 -183804962 + L1PA14 LINE L1 4669 6161 0 1455 179 43 0 chr2 66883121 66883378 -183804476 - AluJo SINE Alu -30 282 15 209 143 39 52 chr2 66883693 66883770 -183804084 + CT-rich Low_complexity Low_complexity 4 79 0 2182 188 54 7 chr2 66883965 66884406 -183803448 + L1MC/D LINE L1 5303 5764 -595 2114 120 0 3 chr2 66884434 66884725 -183803129 + AluSg SINE Alu 1 290 -20 202 295 115 0 chr2 66886072 66886133 -183801721 + L2 LINE L2 3244 3311 -2 1349 125 43 31 chr2 66886577 66886833 -183801021 - L1MA4 LINE L1 -11 6289 6031 225 0 0 0 chr2 66886913 66886938 -183800916 + (TG)n Simple_repeat Simple_repeat 2 26 0 233 216 20 0 chr2 66886939 66886990 -183800864 + GA-rich Low_complexity Low_complexity 3 54 0 958 131 0 15 chr2 66887304 66887441 -183800413 - FRAM SINE Alu -18 158 24 1382 237 147 53 chr2 66887731 66887952 -183799902 - HAL1b LINE L1 0 1348 1149 1762 159 18 0 chr2 66887952 66888235 -183799619 + AluJb SINE Alu 1 288 -24 1382 237 147 53 chr2 66888235 66888530 -183799324 - HAL1b LINE L1 -199 1149 883 825 199 12 0 chr2 66888530 66888696 -183799158 + FAM SINE Alu 1 168 -7 1382 237 147 53 chr2 66888696 66888966 -183798888 - HAL1b LINE L1 -465 883 487 862 223 49 5 chr2 66889496 66889680 -183798174 - MER58A DNA MER1_type -3 221 30 231 171 24 0 chr2 66890670 66890711 -183797143 - L3 LINE CR1 -1 1576 1535 666 223 6 32 chr2 66890825 66890982 -183796872 + MER106B DNA MER1_type 2 154 -905 23 33 0 0 chr2 66890995 66891025 -183796829 + AT_rich Low_complexity Low_complexity 1 30 0 248 139 0 23 chr2 66891026 66891069 -183796785 + MER106A DNA MER1_type 195 236 0 464 256 18 65 chr2 66891128 66891296 -183796558 - MIR SINE MIR 0 262 103 343 247 187 12 chr2 66891489 66891655 -183796199 + MIR SINE MIR 42 236 -26 222 149 0 21 chr2 66891673 66891720 -183796134 + (TA)n Simple_repeat Simple_repeat 2 47 0 436 188 24 0 chr2 66891754 66891839 -183796015 + L1MC1 LINE L1 6240 6326 -7 536 228 13 125 chr2 66892004 66892236 -183795618 + L1ME LINE L1 5578 5783 -338 2220 106 0 0 chr2 66892923 66893261 -183794593 - AluSx SINE Alu 0 338 1 27 0 0 0 chr2 66893261 66893288 -183794566 + AT_rich Low_complexity Low_complexity 1 27 0 407 153 0 0 chr2 66893288 66893347 -183794507 - FRAM/FAM SINE Alu -105 71 13 367 280 55 6 chr2 66895264 66895446 -183792408 - L1MEd LINE L1 -2614 3515 3325 1533 277 90 6 chr2 66895709 66896222 -183791632 + L2 LINE L2 2331 2886 -428 276 310 16 47 chr2 66896444 66896573 -183791281 + L2 LINE L2 3051 3175 -138 2025 154 39 74 chr2 66896573 66897007 -183790847 - MSTB LTR MaLR 0 426 8 284 235 136 0 chr2 66897017 66897098 -183790756 + L2 LINE L2 3221 3312 -1 442 274 154 48 chr2 66897123 66897477 -183790377 - L1MEd LINE L1 -3403 2726 2314 2210 109 3 6 chr2 66897477 66897790 -183790064 + AluSp SINE Alu 1 312 -1 442 274 154 48 chr2 66897790 66897877 -183789977 - L1MEd LINE L1 -3815 2314 2238 1661 160 22 32 chr2 66897879 66898192 -183789662 - AluJo SINE Alu -2 310 1 435 330 71 24 chr2 66898769 66899066 -183788788 - L1MEd LINE L1 -5768 351 41 25 31 0 0 chr2 66900037 66900069 -183787785 + AT_rich Low_complexity Low_complexity 1 32 0 24 53 0 0 chr2 66900322 66900360 -183787494 + AT_rich Low_complexity Low_complexity 1 38 0 337 315 109 11 chr2 66901744 66901928 -183785926 + MIR SINE MIR 20 221 -41 252 235 0 0 chr2 66902065 66902133 -183785721 + (TA)n Simple_repeat Simple_repeat 1 68 0 52 0 0 0 chr2 66902138 66902190 -183785664 + AT_rich Low_complexity Low_complexity 1 52 0 182 232 54 0 chr2 66902540 66902596 -183785258 - MIR SINE MIR -110 152 94 1729 131 71 11 chr2 66905091 66905374 -183782480 + AluSx SINE Alu 1 300 -12 351 281 33 43 chr2 66907734 66907935 -183779919 + L1MEc LINE L1 1461 1820 -4787 1774 191 45 48 chr2 66907960 66908070 -183779784 + L1MEc LINE L1 2706 2815 -3611 1695 170 7 0 chr2 66908070 66908346 -183779508 + AluSx SINE Alu 3 280 -32 189 0 0 0 chr2 66908346 66908367 -183779487 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 1774 191 45 48 chr2 66908367 66908772 -183779082 + L1MEc LINE L1 2813 3220 -3206 5658 205 101 53 chr2 66908773 66909240 -183778614 + L1MEc LINE L1 3375 3818 -2628 630 222 0 8 chr2 66909240 66909366 -183778488 + FLAM_A SINE Alu 1 125 -8 5658 205 101 53 chr2 66909366 66911479 -183776375 + L1MEc LINE L1 3818 6086 -360 * 5929 199 21 11 chr2 66911452 66912755 -183775099 + L1PA15 LINE L1 3601 4916 -1510 684 91 0 0 chr2 66912779 66912867 -183774987 + L1PA6 LINE L1 11 98 -6048 * 32805 73 6 7 chr2 66912865 66918178 -183769676 + L1PA6 LINE L1 847 6154 0 543 261 28 1 chr2 66918177 66918199 -183769655 + L1ME2 LINE L1 5754 5774 -388 * 5743 113 16 6 chr2 66918199 66919686 -183768168 + L1PA15 LINE L1 4632 6159 -6 543 261 28 1 chr2 66919686 66919862 -183767992 + L1ME2 LINE L1 5774 5956 -206 2052 133 16 0 chr2 66919881 66920197 -183767657 - L1PB4 LINE L1 -8 6148 5828 917 198 5 75 chr2 66920198 66920373 -183767481 + L1ME2 LINE L1 5943 6129 -205 2129 113 3 7 chr2 66920373 66920666 -183767188 - AluSq SINE Alu -21 292 1 917 198 5 75 chr2 66920666 66920736 -183767118 + L1ME2 LINE L1 6129 6331 -3 2328 102 3 0 chr2 66921296 66921629 -183766225 - L1PA14 LINE L1 0 6161 5828 610 343 158 30 chr2 66921629 66922915 -183764939 - L2 LINE L2 -571 2743 1293 185 238 12 0 chr2 66924208 66924288 -183763566 + GA-rich Low_complexity Low_complexity 1 81 0 22 0 0 0 chr2 66924740 66924762 -183763092 + AT_rich Low_complexity Low_complexity 1 22 0 1463 0 0 119 chr2 66924915 66925203 -183762651 + L1P4 LINE L1 4980 5276 -885 6516 75 13 12 chr2 66925203 66926129 -183761725 + L1PA8 LINE L1 4565 5491 -681 1855 125 0 97 chr2 66926129 66926450 -183761404 + AluJb SINE Alu 1 290 -22 6516 75 13 12 chr2 66926450 66927131 -183760723 + L1PA8 LINE L1 5491 6170 -2 1463 0 0 119 chr2 66927131 66927290 -183760564 + L1P4 LINE L1 5276 5470 -691 735 55 0 0 chr2 66927290 66927381 -183760473 - AluY SINE Alu -22 289 199 4947 91 13 1 chr2 66927383 66928075 -183759779 + L1PA14 LINE L1 5461 6160 -1 22 0 0 0 chr2 66928095 66928117 -183759737 + AT_rich Low_complexity Low_complexity 1 22 0 1145 186 61 30 chr2 66929991 66930170 -183757684 - MER8 DNA MER2_type -1 238 49 486 0 0 0 chr2 66930170 66930224 -183757630 + (TG)n Simple_repeat Simple_repeat 2 55 0 1145 186 61 30 chr2 66930224 66930275 -183757579 - MER8 DNA MER2_type -190 49 1 525 220 72 76 chr2 66930479 66930743 -183757111 + L1MD3 LINE L1 6096 7995 0 290 282 39 13 chr2 66931009 66931087 -183756767 - L2 LINE L2 -5 3308 3229 1944 200 73 45 chr2 66931111 66931664 -183756190 - MER39 LTR ERV1 0 707 1 613 302 157 20 chr2 66931715 66932093 -183755761 - L2 LINE L2 -178 3135 2709 3429 208 142 8 chr2 66932719 66933731 -183754123 + L1PB1 LINE L1 8 1155 -5708 14885 190 20 19 chr2 66933747 66938162 -183749692 + L1PB1 LINE L1 1321 5797 -1070 2080 81 52 4 chr2 66938162 66938460 -183749394 + AluY SINE Alu 1 311 0 14885 190 20 19 chr2 66938460 66939533 -183748321 + L1PB1 LINE L1 5797 6867 0 1635 170 11 7 chr2 66939749 66940025 -183747829 + AluJo SINE Alu 24 300 -12 555 268 78 6 chr2 66940095 66940274 -183747580 - MIR SINE MIR -39 223 32 2264 115 0 3 chr2 66940837 66941141 -183746713 - AluSx SINE Alu -3 309 7 2335 88 0 0 chr2 66941174 66941468 -183746386 - AluSg SINE Alu -16 294 1 259 301 170 0 chr2 66941621 66941774 -183746080 + MIR SINE MIR 84 262 0 25 31 0 0 chr2 66942062 66942094 -183745760 + AT_rich Low_complexity Low_complexity 1 32 0 211 36 55 36 chr2 66942372 66942427 -183745427 + (TTATA)n Simple_repeat Simple_repeat 1 56 0 2315 99 0 0 chr2 66943784 66944086 -183743768 - AluSg1 SINE Alu -7 302 1 2034 128 3 34 chr2 66944887 66945207 -183742647 + AluSp SINE Alu 1 310 -3 573 263 114 21 chr2 66945353 66945740 -183742114 - L1ME3A LINE L1 -222 5940 5502 937 208 5 5 chr2 66946046 66946258 -183741596 + L1M4 LINE L1 4783 4994 -1152 2394 237 59 55 chr2 66946542 66947580 -183740274 + L1MC5 LINE L1 6480 7531 -430 444 269 50 50 chr2 66947667 66947868 -183739986 + L1ME3A LINE L1 5963 6163 -7 1230 317 13 18 chr2 66948499 66948881 -183738973 + L1PA16 LINE L1 789 1168 -6406 230 290 11 21 chr2 66949029 66949122 -183738732 + L1PA16 LINE L1 1283 1374 -6200 380 291 9 31 chr2 66949147 66949368 -183738486 + L1PA16 LINE L1 2085 2306 -5268 10867 209 88 31 chr2 66949590 66950701 -183737153 + L1PA16 LINE L1 2189 3236 -4368 2158 88 0 14 chr2 66950701 66951008 -183736846 + AluSg SINE Alu 1 303 0 10867 209 88 31 chr2 66951008 66954620 -183733234 + L1PA16 LINE L1 3236 7256 -348 432 0 0 0 chr2 66954620 66954668 -183733186 + (CA)n Simple_repeat Simple_repeat 2 49 0 10867 209 88 31 chr2 66954668 66955036 -183732818 + L1PA16 LINE L1 7256 7602 -2 26 0 0 0 chr2 66955103 66955129 -183732725 + AT_rich Low_complexity Low_complexity 1 26 0 2260 89 0 0 chr2 66955245 66955527 -183732327 + AluSc SINE Alu 1 282 -27 680 179 117 19 chr2 66955826 66955988 -183731866 - MER5B DNA MER1_type 0 178 1 205 300 150 33 chr2 66957040 66957160 -183730694 + L2 LINE L2 3133 3266 -6 248 304 17 70 chr2 66957387 66957537 -183730317 - MIR3 SINE MIR -7 201 60 198 289 0 0 chr2 66957866 66957918 -183729936 + L2 LINE L2 3261 3312 -1 425 254 239 0 chr2 66958012 66958221 -183729633 - MIR SINE MIR -1 261 3 22 35 0 0 chr2 66960399 66960428 -183727426 + AT_rich Low_complexity Low_complexity 1 29 0 516 271 144 35 chr2 66963586 66963815 -183724039 + MIR SINE MIR 2 255 -7 213 213 0 0 chr2 66966194 66966241 -183721613 + L2 LINE L2 3263 3309 -4 433 272 37 43 chr2 66966296 66966458 -183721396 - L3 LINE CR1 -47 1530 1370 819 233 112 4 chr2 66966791 66967023 -183720831 + MIR SINE MIR 6 262 0 193 348 112 0 chr2 66967281 66967370 -183720484 - L3 LINE CR1 -1415 162 64 2039 260 136 29 chr2 66967747 66968820 -183719034 - L2 LINE L2 0 3313 2105 218 340 64 32 chr2 66970600 66970694 -183717160 - MIR SINE MIR -92 116 20 1070 167 5 16 chr2 66970813 66970999 -183716855 + MER1B DNA MER1_type 1 184 -113 323 192 13 64 chr2 66970998 66971076 -183716778 + MER20 DNA MER1_type 6 79 -140 * 336 258 113 0 chr2 66972331 66972455 -183715399 + L1MC4a LINE L1 5770 5907 -1901 25 31 0 0 chr2 66972638 66972670 -183715184 + AT_rich Low_complexity Low_complexity 1 32 0 288 0 0 0 chr2 66973084 66973116 -183714738 + (CA)n Simple_repeat Simple_repeat 2 33 0 3208 118 14 0 chr2 66973285 66973793 -183714061 + L1MA7 LINE L1 5769 6283 -8 945 98 18 1 chr2 66973644 66973816 -183714038 + L1MA7 LINE L1 6133 6312 0 2005 247 72 46 chr2 66973988 66975407 -183712447 + L1M2 LINE L1 1 1864 -5345 3201 181 33 5 chr2 66975507 66976265 -183711589 - L1M2 LINE L1 -4025 2824 2046 2822 84 5 0 chr2 66976265 66976648 -183711206 - L1PA6 LINE L1 0 6154 5770 11804 43 1 0 chr2 66976670 66978891 -183708963 - L1PA5 LINE L1 -8 6146 3937 24 32 0 0 chr2 66979076 66979107 -183708747 + AT_rich Low_complexity Low_complexity 1 31 0 2311 142 69 9 chr2 66979495 66979917 -183707937 + LTR47A LTR ERVL 4 450 -2 270 81 0 0 chr2 66982137 66982174 -183705680 + (TG)n Simple_repeat Simple_repeat 2 38 0 661 190 9 0 chr2 66982613 66982729 -183705125 + FLAM_C SINE Alu 1 117 -16 1871 111 32 3 chr2 66982900 66983215 -183704639 + L1MC1 LINE L1 5803 6126 -207 1450 174 34 4 chr2 66984584 66985063 -183702791 - L1P4 LINE L1 -688 5478 4985 2173 120 7 0 chr2 66985063 66985371 -183702483 - AluSx SINE Alu -2 310 1 9400 94 13 3 chr2 66985957 66987379 -183700475 + L1P LINE L1 263 1697 -4449 236 227 82 62 chr2 66987659 66987756 -183700098 + L3b LINE CR1 1419 1517 -66 818 260 48 20 chr2 66988344 66988594 -183699260 - MIR SINE MIR 0 262 6 1207 134 5 11 chr2 66989298 66989484 -183698370 + AluSg/x SINE Alu 114 298 -12 409 229 59 0 chr2 66989485 66989612 -183698242 + L1ME LINE L1 5481 5614 -552 228 35 0 0 chr2 66989945 66989974 -183697880 + (T)n Simple_repeat Simple_repeat 1 29 0 371 384 65 4 chr2 66991952 66992231 -183695623 + L2 LINE L2 2365 2660 -654 181 0 69 0 chr2 66992613 66992642 -183695212 + (CAAT)n Simple_repeat Simple_repeat 4 34 0 293 283 0 87 chr2 66992784 66992922 -183694932 + MIR SINE MIR 20 145 -63 23 54 0 0 chr2 66994065 66994102 -183693752 + AT_rich Low_complexity Low_complexity 1 37 0 792 172 35 75 chr2 66994369 66994515 -183693339 - MSTA LTR MaLR -210 218 83 2226 124 65 0 chr2 66994515 66994869 -183692985 - MER51B LTR ERV1 0 377 1 792 172 35 75 chr2 66994869 66994949 -183692905 - MSTA LTR MaLR -345 83 1 1513 194 11 11 chr2 66994979 66995262 -183692592 - AluJo SINE Alu -12 300 18 510 372 50 31 chr2 66995283 66995702 -183692152 - L1MEc LINE L1 -5828 568 142 341 260 36 4 chr2 66995969 66996087 -183691767 - MLT1J1 LTR MaLR -285 161 56 1083 153 6 0 chr2 66996766 66996943 -183690911 - AluSg/x SINE Alu -9 303 126 291 104 0 0 chr2 66996943 66996991 -183690863 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 2078 64 14 3 chr2 66996992 66997274 -183690580 - AluY SINE Alu -26 285 1 504 295 52 16 chr2 66997971 66998164 -183689690 - MLT1J2 LTR MaLR 0 450 251 6192 159 2 30 chr2 66998408 66999688 -183688166 + L1P LINE L1 876 2120 -4026 1092 208 17 20 chr2 66999788 67000081 -183687773 - L1 LINE L1 -3092 3054 2763 23 54 0 0 chr2 67001324 67001361 -183686493 + AT_rich Low_complexity Low_complexity 1 37 0 258 324 44 15 chr2 67001520 67001724 -183686130 - L1PBa LINE L1 -5737 1126 917 1091 228 114 7 chr2 67001805 67002227 -183685627 - Charlie2b DNA MER1_type -576 2206 1820 734 319 143 3 chr2 67002300 67002657 -183685197 + LTR33 LTR ERVL 103 509 -12 245 263 0 81 chr2 67002674 67002773 -183685081 - Charlie2b DNA MER1_type -1041 1821 1651 4162 198 23 27 chr2 67003042 67004056 -183683798 + L1MA9 LINE L1 5303 6312 0 201 365 82 32 chr2 67004883 67005102 -183682752 + L2 LINE L2 2702 2931 -383 3565 132 52 18 chr2 67006302 67006978 -183680876 + MER4A-int LTR ERV1 5899 6597 -1 420 187 0 22 chr2 67006987 67007078 -183680776 + MER4A LTR ERV1 1 89 -575 1682 142 10 24 chr2 67007119 67007415 -183680439 + MER4A LTR ERV1 373 664 0 359 255 205 30 chr2 67007674 67007874 -183679980 - MIR SINE MIR -26 236 2 250 316 58 50 chr2 67008072 67008211 -183679643 + MIR SINE MIR 97 236 -26 240 290 19 56 chr2 67008311 67008418 -183679436 + MER5A DNA MER1_type 10 112 -77 1900 109 7 13 chr2 67008601 67008903 -183678951 + MER41-int LTR ERV1 4883 5182 -764 2134 112 3 0 chr2 67008903 67009224 -183678630 - AluSq SINE Alu 0 322 1 21 0 0 0 chr2 67011435 67011456 -183676398 + AT_rich Low_complexity Low_complexity 1 21 0 1739 215 25 18 chr2 67011760 67012354 -183675500 - MER82 DNA MER2_type -1 652 1 583 270 77 51 chr2 67014322 67014633 -183673221 + MLT1J1 LTR MaLR 1 319 -127 27 29 0 0 chr2 67014895 67014929 -183672925 + AT_rich Low_complexity Low_complexity 1 34 0 436 279 0 0 chr2 67015830 67015941 -183671913 + MLT1L LTR MaLR 141 251 -364 1672 119 0 16 chr2 67016188 67016441 -183671413 - THE1C LTR MaLR -126 249 1 325 226 21 0 chr2 67017890 67017962 -183669892 + FLAM_A SINE Alu 52 101 -201 399 21 0 0 chr2 67017962 67018010 -183669844 + (GGAA)n Simple_repeat Simple_repeat 3 50 0 325 226 21 0 chr2 67018010 67018033 -183669821 + FLAM_A SINE Alu 101 122 -180 1067 177 10 0 chr2 67018412 67018621 -183669233 - L1 LINE L1 -2023 4123 3913 2209 144 28 46 chr2 67019213 67019649 -183668205 - MSTC LTR MaLR 0 428 1 282 29 0 0 chr2 67019791 67019826 -183668028 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 12741 49 3 1 chr2 67019995 67021692 -183666162 - L1P LINE L1 -1281 4865 3165 235 210 12 49 chr2 67021883 67021964 -183665890 - L1MC4 LINE L1 -1351 6691 6614 201 360 90 0 chr2 67021967 67022056 -183665798 - L2 LINE L2 -33 3239 3143 245 270 0 16 chr2 67023217 67023280 -183664574 - MIR SINE MIR -87 175 114 306 175 12 25 chr2 67023528 67023608 -183664246 - L1MB8 LINE L1 0 6178 6100 33 0 0 0 chr2 67023621 67023654 -183664200 + AT_rich Low_complexity Low_complexity 1 33 0 1178 192 54 0 chr2 67023657 67023897 -183663957 - L1MA6 LINE L1 -9 6291 6039 2277 105 17 0 chr2 67024271 67024615 -183663239 - THE1A LTR MaLR -5 350 1 34 24 0 0 chr2 67024914 67024955 -183662899 + AT_rich Low_complexity Low_complexity 1 41 0 329 206 6 42 chr2 67025236 67025401 -183662453 + CT-rich Low_complexity Low_complexity 2 160 0 22 56 0 0 chr2 67025787 67025823 -183662031 + AT_rich Low_complexity Low_complexity 1 36 0 409 272 8 0 chr2 67026693 67026818 -183661036 + L1MEc LINE L1 105 230 -6166 188 151 0 38 chr2 67027163 67027216 -183660638 + T-rich Low_complexity Low_complexity 5 55 0 1388 168 38 7 chr2 67027222 67027513 -183660341 + L1P LINE L1 3782 4081 -2065 2225 114 7 3 chr2 67027514 67027820 -183660034 + AluSg SINE Alu 1 307 -3 3634 178 26 14 chr2 67027842 67028901 -183658953 + L1MC1 LINE L1 4899 5966 -367 2313 116 30 69 chr2 67028930 67029394 -183658460 + L1MC1 LINE L1 5888 6333 0 583 225 70 48 chr2 67029456 67029683 -183658171 + MLT2C1 LTR ERVL 1 232 -165 257 91 45 0 chr2 67029695 67029739 -183658115 + CT-rich Low_complexity Low_complexity 3 48 0 4548 56 3 2 chr2 67030103 67030670 -183657184 + L1PA5 LINE L1 5579 6146 -8 2788 89 5 0 chr2 67030692 67031075 -183656779 + L1PA6 LINE L1 5770 6154 0 3622 188 27 7 chr2 67031075 67031972 -183655882 + L1M2 LINE L1 2046 2958 -3890 336 95 32 32 chr2 67032529 67032592 -183655262 + AluJ/FLAM SINE Alu 1 63 -239 232 295 0 0 chr2 67032581 67032642 -183655212 + LTR16A1 LTR ERVL 277 337 -120 * 2227 76 10 0 chr2 67032784 67033088 -183654766 + AluY SINE Alu 1 307 -4 3488 155 37 9 chr2 67033090 67033768 -183654086 + L1MA4A LINE L1 5607 6303 0 1993 80 107 0 chr2 67033808 67034071 -183653783 - AluY SINE Alu -20 291 1 322 291 19 85 chr2 67034144 67034322 -183653532 - L2 LINE L2 -219 3053 2896 2201 155 59 7 chr2 67034322 67034729 -183653125 + MSTA LTR MaLR 1 428 0 322 291 19 85 chr2 67034729 67034808 -183653046 - L2 LINE L2 -376 2896 2813 311 282 39 77 chr2 67034843 67034999 -183652855 - L1MC4a LINE L1 -1635 6173 6024 269 135 19 0 chr2 67035118 67035170 -183652684 + (TA)n Simple_repeat Simple_repeat 1 53 0 368 99 53 33 chr2 67035279 67035431 -183652423 + (TA)n Simple_repeat Simple_repeat 1 155 0 2024 119 7 13 chr2 67035883 67036193 -183651661 + AluSg SINE Alu 1 308 -2 1086 218 44 57 chr2 67036318 67036685 -183651169 + MER31-int LTR ERV1 3346 3707 -1229 283 252 56 0 chr2 67036721 67036828 -183651026 + MIR SINE MIR 150 262 0 2475 109 25 5 chr2 67037688 67038056 -183649798 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr2 67038544 67038565 -183649289 + AT_rich Low_complexity Low_complexity 1 21 0 341 153 14 0 chr2 67039242 67039314 -183648540 + GA-rich Low_complexity Low_complexity 1 73 0 22 0 0 0 chr2 67039785 67039807 -183648047 + AT_rich Low_complexity Low_complexity 1 22 0 249 311 47 47 chr2 67040092 67040240 -183647614 - MIR SINE MIR -8 254 107 202 207 276 23 chr2 67040643 67040730 -183647124 - MER5A DNA MER1_type -77 112 4 760 59 10 0 chr2 67040925 67041027 -183646827 - AluY SINE Alu -11 300 198 1313 215 11 8 chr2 67041127 67041392 -183646462 - AluJo SINE Alu -46 266 1 3286 168 29 13 chr2 67043939 67045114 -183642740 + L1M2 LINE L1 4618 5813 -478 924 126 31 13 chr2 67046588 67046787 -183641067 + AluSg/x SINE Alu 120 321 0 1711 134 4 25 chr2 67048241 67048517 -183639337 - AluSx SINE Alu -38 274 5 254 350 6 38 chr2 67050090 67050250 -183637604 - MIR3 SINE MIR 0 208 54 4959 104 4 4 chr2 67050278 67050961 -183636893 + LTR5 LTR ERVK 1 683 -286 6909 120 211 5 chr2 67051252 67052530 -183635324 - THE1A-int LTR MaLR -39 1541 1 238 111 0 0 chr2 67052530 67052566 -183635288 - THE1A LTR MaLR 0 355 320 364 238 10 10 chr2 67052835 67052936 -183634918 + MLT1K LTR MaLR 486 586 -2 266 87 0 22 chr2 67052951 67052997 -183634857 - MADE1 DNA Mariner -2 78 34 621 229 7 0 chr2 67053088 67053232 -183634622 + L1M2 LINE L1 4813 4957 -1189 582 114 0 0 chr2 67053234 67053313 -183634541 + AluSg1 SINE Alu 4 82 -227 2005 164 28 1 chr2 67053313 67053799 -183634055 + L1M2 LINE L1 4948 5451 -743 684 105 35 0 chr2 67053902 67054016 -183633838 - MLT1C LTR MaLR -349 118 1 3256 166 35 9 chr2 67055073 67056213 -183631641 - L1P5 LINE L1 -455 5699 4528 16159 45 2 1 chr2 67056362 67059135 -183628719 - L1PA5 LINE L1 -18 6136 3367 11967 172 48 33 chr2 67059333 67059887 -183627967 + L1MA4A LINE L1 2382 2926 -3220 1902 130 3 18 chr2 67059887 67060208 -183627646 + AluSx SINE Alu 1 317 0 11967 172 48 33 chr2 67060208 67060487 -183627367 + L1MA4A LINE L1 2926 3199 -2947 1905 129 16 52 chr2 67060487 67060797 -183627057 + AluSx SINE Alu 1 299 -13 11967 172 48 33 chr2 67060797 67061606 -183626248 + L1MA4A LINE L1 3199 3994 -2152 2341 82 7 0 chr2 67061606 67061899 -183625955 + AluSc SINE Alu 10 304 -5 11967 172 48 33 chr2 67061899 67063211 -183624643 + L1MA4A LINE L1 3994 5386 -760 4590 135 39 12 chr2 67063216 67063385 -183624469 + L1MA4A LINE L1 5431 5594 -709 2134 133 0 3 chr2 67063385 67063694 -183624160 + AluSx SINE Alu 1 308 -4 4590 135 39 12 chr2 67063694 67064374 -183623480 + L1MA4A LINE L1 5594 6303 0 1993 80 107 0 chr2 67064414 67064677 -183623177 - AluY SINE Alu -20 291 1 332 304 19 82 chr2 67064750 67064927 -183622927 - L2 LINE L2 -219 3053 2895 2406 144 51 7 chr2 67064927 67065337 -183622517 + MSTA LTR MaLR 1 428 0 332 304 19 82 chr2 67065337 67065416 -183622438 - L2 LINE L2 -377 2895 2813 1220 329 112 47 chr2 67065623 67065665 -183622189 - L2 LINE L2 -569 2745 2707 4692 58 2 2 chr2 67065665 67066281 -183621573 + L1PA5 LINE L1 5556 6171 0 1220 329 112 47 chr2 67066281 67067255 -183620599 - L2 LINE L2 -607 2707 1662 4648 168 14 41 chr2 67067256 67068817 -183619037 + L1MB2 LINE L1 4654 6170 -1 284 0 28 0 chr2 67068877 67068913 -183618941 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 762 271 75 14 chr2 67068926 67069140 -183618714 - MIR SINE MIR -32 230 4 2326 202 52 18 chr2 67069209 67069768 -183618086 - MER119 DNA MER1_type 0 583 6 22 0 0 0 chr2 67070350 67070372 -183617482 + AT_rich Low_complexity Low_complexity 1 22 0 2047 113 28 0 chr2 67070957 67071248 -183616606 + AluSx SINE Alu 9 307 -5 2304 106 3 0 chr2 67071249 67071552 -183616302 + AluSg SINE Alu 2 305 -5 950 284 82 3 chr2 67071756 67072087 -183615767 + LTR16B LTR ERVL 107 463 -1 262 263 25 0 chr2 67072203 67072283 -183615571 - HAL1 LINE L1 -102 2405 2324 654 202 138 59 chr2 67072494 67072747 -183615107 + L2 LINE L2 1565 1837 -1477 5499 108 8 6 chr2 67072747 67073608 -183614246 + L1PA13 LINE L1 5290 6152 -11 3520 249 81 21 chr2 67073623 67075016 -183612838 + L2 LINE L2 1843 3313 0 2164 230 127 79 chr2 67075388 67075688 -183612166 - HAL1 LINE L1 -566 1941 1657 561 26 52 0 chr2 67075688 67075765 -183612089 - L1PA3 LINE L1 0 6155 6075 2164 230 127 79 chr2 67075765 67076328 -183611526 - HAL1 LINE L1 -850 1657 1122 1863 118 104 0 chr2 67076328 67076607 -183611247 - AluSx SINE Alu -4 308 1 2164 230 127 79 chr2 67076607 67077175 -183610679 - HAL1 LINE L1 -1385 1122 452 423 323 61 52 chr2 67077191 67077553 -183610301 - HAL1 LINE L1 -2140 367 3 561 214 105 124 chr2 67077634 67077891 -183609963 + MIR SINE MIR 1 252 -10 315 319 70 25 chr2 67078194 67078351 -183609503 - L1MC/D LINE L1 -2231 5577 5414 286 215 129 72 chr2 67078568 67078777 -183609077 + L1ME4a LINE L1 5901 6121 0 2859 164 44 21 chr2 67081259 67081831 -183606023 + L1PB1 LINE L1 1 585 -6278 * 13145 160 15 27 chr2 67081828 67085713 -183602141 + L1PB1 LINE L1 3095 6932 0 930 128 180 0 chr2 67087707 67087879 -183599975 + MER3 DNA MER1_type 7 209 0 204 195 26 39 chr2 67089109 67089186 -183598668 + (TAAA)n Simple_repeat Simple_repeat 1 76 0 22 70 0 0 chr2 67089413 67089456 -183598398 + AT_rich Low_complexity Low_complexity 1 43 0 213 261 15 15 chr2 67089528 67089593 -183598261 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 435 259 42 7 chr2 67092290 67092433 -183595421 + L1ME3A LINE L1 6016 6163 -7 2296 204 64 19 chr2 67092949 67093531 -183594323 + L1MC4 LINE L1 6470 7077 -965 21 0 0 0 chr2 67093536 67093557 -183594297 + AT_rich Low_complexity Low_complexity 1 21 0 1715 210 152 31 chr2 67093559 67094144 -183593710 + L1MC4 LINE L1 7248 7903 -139 223 353 107 8 chr2 67094230 67094352 -183593502 - L2 LINE L2 -194 3078 2945 1135 284 184 41 chr2 67094773 67095791 -183592063 - HAL1 LINE L1 -1341 1166 4 549 209 0 0 chr2 67096244 67096349 -183591505 - AluJb SINE Alu -6 306 202 435 177 0 0 chr2 67098012 67098108 -183589746 + (ATG)n Simple_repeat Simple_repeat 2 97 0 709 247 147 0 chr2 67098128 67098318 -183589536 - MIR SINE MIR -44 218 1 2685 26 0 0 chr2 67098384 67098686 -183589168 + AluY SINE Alu 1 302 -9 262 283 100 25 chr2 67099020 67099140 -183588714 + MARNA DNA Mariner 72 200 -386 410 269 99 0 chr2 67099318 67099459 -183588395 + MIR SINE MIR 30 184 -78 22 0 0 0 chr2 67099538 67099560 -183588294 + AT_rich Low_complexity Low_complexity 1 22 0 2301 114 0 0 chr2 67100575 67100881 -183586973 + AluSx SINE Alu 1 306 -6 185 286 219 25 chr2 67103969 67104088 -183583766 - L2 LINE L2 -998 2316 2175 258 56 0 0 chr2 67104192 67104228 -183583626 + (TG)n Simple_repeat Simple_repeat 2 37 0 391 209 177 38 chr2 67104379 67104537 -183583317 + MIR SINE MIR 37 216 -46 1675 191 0 7 chr2 67105027 67105325 -183582529 + AluJo SINE Alu 1 296 -16 2038 144 3 0 chr2 67105356 67105661 -183582193 - AluSq SINE Alu -7 306 1 268 284 117 18 chr2 67105885 67106107 -183581747 - L1ME4a LINE L1 -183 5938 5695 802 252 63 21 chr2 67106122 67106442 -183581412 - L1ME4a LINE L1 -575 5599 5270 249 200 0 46 chr2 67108002 67108067 -183579787 - MIR SINE MIR -48 214 153 396 0 0 0 chr2 67108070 67108114 -183579740 + (TG)n Simple_repeat Simple_repeat 1 44 0 380 338 7 26 chr2 67108218 67108372 -183579482 - MIR3 SINE MIR -55 153 3 276 282 40 73 chr2 67109518 67109642 -183578212 - L2 LINE L2 -8 3264 3145 851 303 84 24 chr2 67110116 67110618 -183577236 + HAL1 LINE L1 12 543 -1964 * 2128 218 71 30 chr2 67110617 67111322 -183576532 + HAL1 LINE L1 1054 1787 -720 * 28103 107 6 6 chr2 67111295 67114437 -183573417 + L1PA7 LINE L1 1111 4247 -1907 1821 156 3 13 chr2 67114437 67114744 -183573110 + AluY SINE Alu 1 304 -7 28103 107 6 6 chr2 67114744 67116640 -183571214 + L1PA7 LINE L1 4247 6141 -13 1081 253 76 51 chr2 67116658 67117132 -183570722 + HAL1 LINE L1 1748 2233 -274 3127 144 150 8 chr2 67117147 67117766 -183570088 + MER39 LTR ERV1 1 707 0 780 226 75 9 chr2 67117766 67117992 -183569862 + HAL1 LINE L1 2245 2485 -22 31 0 0 0 chr2 67118889 67118920 -183568934 + AT_rich Low_complexity Low_complexity 1 31 0 239 200 154 123 chr2 67119419 67119487 -183568367 - MIR SINE MIR -13 249 185 2332 102 0 0 chr2 67119487 67119782 -183568072 + AluSx SINE Alu 2 296 -16 239 200 154 123 chr2 67119782 67119843 -183568011 - MIR SINE MIR -77 185 116 1109 127 75 4 chr2 67119930 67120158 -183567696 - L1MA4 LINE L1 -8 6292 6049 925 211 116 28 chr2 67120263 67120514 -183567340 + MLT1F LTR MaLR 202 474 -68 307 309 81 40 chr2 67120737 67120960 -183566894 + L2 LINE L2 2444 2675 -639 31 44 0 0 chr2 67120988 67121033 -183566821 + AT_rich Low_complexity Low_complexity 1 45 0 2061 126 10 7 chr2 67121625 67121934 -183565920 - AluSx SINE Alu -2 310 1 12694 205 35 18 chr2 67122015 67124356 -183563498 + L1PA15 LINE L1 93 2394 -4403 1947 144 3 20 chr2 67124356 67124661 -183563193 + AluJb SINE Alu 3 302 -10 12694 205 35 18 chr2 67124661 67125778 -183562076 + L1PA15 LINE L1 2394 3491 -3306 1730 59 51 8 chr2 67125778 67126014 -183561840 - L1PA7 LINE L1 0 6154 5909 12694 205 35 18 chr2 67126014 67126184 -183561670 + L1PA15 LINE L1 3491 3657 -3140 399 92 0 0 chr2 67126184 67126249 -183561605 + (CA)n Simple_repeat Simple_repeat 2 66 0 12694 205 35 18 chr2 67126249 67127374 -183560480 + L1PA15 LINE L1 3657 4762 -2035 2186 123 3 0 chr2 67127374 67127675 -183560179 + AluSp SINE Alu 1 302 -11 12694 205 35 18 chr2 67127675 67128581 -183559273 + L1PA15 LINE L1 4762 5876 -921 3957 107 3 2 chr2 67128581 67129161 -183558693 + L1PA15 LINE L1 6236 6816 0 225 302 31 0 chr2 67129304 67129400 -183558454 - HAL1 LINE L1 -1599 908 810 225 0 0 0 chr2 67129799 67129824 -183558030 + (TG)n Simple_repeat Simple_repeat 2 26 0 635 345 83 18 chr2 67130272 67130669 -183557185 + L2 LINE L2 2825 3247 -66 1077 255 89 50 chr2 67130828 67130966 -183556888 + LTR40b LTR ERVL 1 132 -330 18968 53 10 1 chr2 67130966 67134182 -183553672 - L1PA5 LINE L1 -2 6152 2914 1077 255 89 50 chr2 67134182 67134459 -183553395 + LTR40b LTR ERVL 132 432 -30 37398 79 5 6 chr2 67134470 67140362 -183547492 + L1PA6 LINE L1 11 5898 -256 21 0 0 0 chr2 67140652 67140673 -183547181 + AT_rich Low_complexity Low_complexity 1 21 0 231 299 8 17 chr2 67140748 67140865 -183546989 - LTR67 LTR ERVL -16 541 426 2422 88 3 0 chr2 67141198 67141503 -183546351 + AluSx SINE Alu 1 306 -6 1571 179 34 17 chr2 67141741 67142037 -183545817 + AluJo SINE Alu 1 301 -11 7151 65 148 2 chr2 67142085 67143151 -183544703 + MER11B LTR ERVK 1 1222 -14 2138 121 3 3 chr2 67143838 67144135 -183543719 - AluSg SINE Alu -13 297 1 231 268 214 33 chr2 67144874 67145150 -183542704 + L2 LINE L2 2434 2759 -555 416 167 89 0 chr2 67145212 67145302 -183542552 + MER4A LTR ERV1 1 98 -566 * 1673 136 5 68 chr2 67145297 67145671 -183542183 + MER4A LTR ERV1 256 664 0 * 2881 208 40 67 chr2 67145671 67146484 -183541370 - MER21B LTR ERV1 -61 802 12 873 311 123 23 chr2 67146502 67146942 -183540912 + L2 LINE L2 2828 3311 -2 241 304 113 9 chr2 67147005 67147120 -183540734 + L3b LINE CR1 1216 1342 -241 * 566 254 212 11 chr2 67147104 67147293 -183540561 - MIR SINE MIR 0 262 36 236 342 49 43 chr2 67147309 67147493 -183540361 + L3b LINE CR1 1317 1501 -82 4888 48 3 0 chr2 67147504 67148093 -183539761 - LTR10C LTR ERV1 0 591 1 233 158 35 0 chr2 67148107 67148164 -183539690 + L1ME3A LINE L1 5718 5776 -386 320 209 182 36 chr2 67148180 67148290 -183539564 + L1ME3A LINE L1 5841 5966 -204 529 265 0 61 chr2 67149864 67149960 -183537894 + MIR SINE MIR 4 90 -172 2198 104 3 23 chr2 67149960 67150268 -183537586 - AluY SINE Alu -9 302 1 529 265 0 61 chr2 67150268 67150318 -183537536 + MIR SINE MIR 90 141 -121 766 214 140 0 chr2 67150332 67150561 -183537293 - L1MEc LINE L1 -4478 1918 1658 733 226 11 23 chr2 67150557 67150734 -183537120 - L1MEc LINE L1 -5888 317 143 * 294 121 0 99 chr2 67151048 67151230 -183536624 + (TA)n Simple_repeat Simple_repeat 1 164 0 3905 196 37 18 chr2 67151690 67152528 -183535326 - MER21B LTR ERV1 -9 854 1 21 0 0 0 chr2 67153478 67153499 -183534355 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 67153909 67153935 -183533919 + AT_rich Low_complexity Low_complexity 1 26 0 2172 145 0 0 chr2 67154985 67155295 -183532559 + AluSx SINE Alu 1 310 -2 301 171 0 26 chr2 67155382 67155458 -183532396 + (TAGA)n Simple_repeat Simple_repeat 1 74 0 1406 194 83 21 chr2 67155459 67155823 -183532031 + MSTD LTR MaLR 1 383 -7 3025 216 78 12 chr2 67155833 67156723 -183531131 + L1MC4 LINE L1 7094 8041 -1 4672 258 78 18 chr2 67156871 67157382 -183530472 + L1MEc LINE L1 245 724 -5672 1700 163 48 7 chr2 67157382 67157671 -183530183 + AluJb SINE Alu 1 301 -11 4672 258 78 18 chr2 67157671 67159042 -183528812 + L1MEc LINE L1 724 2239 -4157 2254 100 7 0 chr2 67159060 67159359 -183528495 + AluSc SINE Alu 1 301 -8 878 167 7 177 chr2 67159501 67159806 -183528048 + AluJo SINE Alu 21 273 -39 183 80 0 0 chr2 67159814 67159839 -183528015 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 330 209 19 164 chr2 67160014 67160325 -183527529 - L1ME3A LINE L1 -225 5945 5680 274 326 79 0 chr2 67160391 67160480 -183527374 - MIR SINE MIR -108 154 59 1788 174 33 10 chr2 67161488 67161787 -183526067 - AluJo SINE Alu -6 306 1 891 60 0 17 chr2 67162541 67162658 -183525196 - L1PA5 LINE L1 -9 6145 6031 483 267 150 42 chr2 67162821 67163061 -183524793 - L2 LINE L2 -1057 2257 1992 195 250 0 42 chr2 67165875 67165923 -183521931 - L3 LINE CR1 -15 1562 1517 266 211 0 0 chr2 67166051 67166108 -183521746 - MER31A LTR ERV1 -76 409 353 202 343 176 0 chr2 67166227 67166329 -183521525 - MIR3 SINE MIR -7 201 82 998 233 58 17 chr2 67167469 67167709 -183520145 - MIR SINE MIR -11 251 2 299 253 25 13 chr2 67167766 67167845 -183520009 + L2 LINE L2 3193 3272 0 1642 176 17 14 chr2 67168013 67168303 -183519551 - AluJb SINE Alu -21 291 1 28 29 0 0 chr2 67168312 67168347 -183519507 + AT_rich Low_complexity Low_complexity 1 35 0 500 280 23 8 chr2 67168417 67168549 -183519305 - L2 LINE L2 -4 3309 3176 2179 114 23 0 chr2 67168741 67169047 -183518807 - AluSp SINE Alu 0 313 1 29 28 0 0 chr2 67171798 67171834 -183516020 + AT_rich Low_complexity Low_complexity 1 36 0 308 259 355 5 chr2 67172460 67172649 -183515205 + MIR SINE MIR 8 262 0 1663 159 0 15 chr2 67172958 67173229 -183514625 - AluSx SINE Alu -45 267 1 682 355 109 38 chr2 67173232 67174098 -183513756 + L2 LINE L2 2342 3272 0 1798 146 36 0 chr2 67175590 67175871 -183511983 + AluSx SINE Alu 16 306 -6 21 36 0 0 chr2 67176315 67176343 -183511511 + AT_rich Low_complexity Low_complexity 1 28 0 255 31 0 0 chr2 67176903 67176935 -183510919 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1127 133 51 61 chr2 67176938 67177134 -183510720 - AluJb SINE Alu -35 277 84 1756 171 20 7 chr2 67177136 67177434 -183510420 - AluSx SINE Alu -10 302 1 204 290 16 0 chr2 67178112 67178174 -183509680 + (CATA)n Simple_repeat Simple_repeat 4 66 0 21 36 0 0 chr2 67178796 67178824 -183509030 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 67178855 67178885 -183508969 + AT_rich Low_complexity Low_complexity 1 30 0 30 83 0 0 chr2 67179712 67179784 -183508070 + AT_rich Low_complexity Low_complexity 1 72 0 24 67 0 0 chr2 67180563 67180608 -183507246 + AT_rich Low_complexity Low_complexity 1 45 0 327 104 0 0 chr2 67181451 67181499 -183506355 + (TG)n Simple_repeat Simple_repeat 1 48 0 326 129 16 0 chr2 67181499 67181561 -183506293 + GA-rich Low_complexity Low_complexity 2 64 0 22 0 0 0 chr2 67182015 67182037 -183505817 + AT_rich Low_complexity Low_complexity 1 22 0 663 322 106 67 chr2 67182495 67183210 -183504644 + L1MEd LINE L1 268 1010 -5109 4476 143 64 32 chr2 67183225 67183718 -183504136 + L1MA4 LINE L1 5301 5777 -523 324 48 0 0 chr2 67183718 67183760 -183504094 + (CA)n Simple_repeat Simple_repeat 2 43 0 4476 143 64 32 chr2 67183760 67184230 -183503624 + L1MA4 LINE L1 5777 6295 -5 610 245 66 4 chr2 67184320 67184593 -183503261 + L1MEd LINE L1 2201 2490 -3639 448 279 65 79 chr2 67184647 67184822 -183503032 + L1MEd LINE L1 2591 2767 -3362 815 158 0 8 chr2 67184822 67184955 -183502899 - FLAM_A SINE Alu -1 132 1 448 279 65 79 chr2 67184955 67185128 -183502726 + L1MEd LINE L1 2767 2941 -3188 2221 117 7 3 chr2 67185128 67185435 -183502419 + AluSx SINE Alu 1 308 -4 448 279 65 79 chr2 67185435 67185571 -183502283 + L1MEd LINE L1 2941 3166 -2963 2182 96 3 3 chr2 67185654 67185955 -183501899 + AluSg SINE Alu 7 307 -3 432 0 0 0 chr2 67186354 67186402 -183501452 + (CA)n Simple_repeat Simple_repeat 2 49 0 586 310 150 12 chr2 67186494 67186820 -183501034 + L2 LINE L2 1851 2221 -1093 242 241 24 0 chr2 67186838 67186921 -183500933 - L1MC4 LINE L1 -1344 6698 6614 234 228 0 43 chr2 67186841 67186933 -183500921 + L1MC4 LINE L1 6614 6701 -1341 * 216 97 0 0 chr2 67186937 67186968 -183500886 + (TA)n Simple_repeat Simple_repeat 2 32 0 263 375 29 19 chr2 67187042 67187250 -183500604 + L2 LINE L2 2336 2545 -769 2257 132 91 10 chr2 67187427 67187821 -183500033 + MSTB LTR MaLR 1 426 0 824 159 8 0 chr2 67188122 67188254 -183499600 - FLAM_C SINE Alu 0 133 1 439 92 66 0 chr2 67188686 67188762 -183499092 - L1PA16 LINE L1 0 6166 6086 2635 228 68 14 chr2 67189895 67190590 -183497264 - L1MC4 LINE L1 -2 8040 7299 1873 84 4 4 chr2 67190590 67190827 -183497027 + AluSq SINE Alu 59 295 -18 2635 228 68 14 chr2 67190827 67190900 -183496954 - L1MC4 LINE L1 -743 7299 7231 20226 153 32 61 chr2 67190923 67191958 -183495896 + L1PA10 LINE L1 78 1142 -5319 180 77 0 0 chr2 67191958 67191984 -183495870 + (CAA)n Simple_repeat Simple_repeat 2 27 0 20226 153 32 61 chr2 67191984 67194411 -183493443 + L1PA10 LINE L1 1142 3638 -2823 2342 94 3 3 chr2 67194411 67194719 -183493135 + AluSg SINE Alu 3 310 0 20226 153 32 61 chr2 67194719 67196110 -183491744 + L1PA10 LINE L1 3638 4957 -1504 1812 134 40 11 chr2 67196110 67196413 -183491441 + AluSp SINE Alu 1 311 0 20226 153 32 61 chr2 67196413 67196684 -183491170 + L1PA10 LINE L1 4957 5234 -1227 3684 64 0 0 chr2 67196684 67197150 -183490704 + L1PA6 LINE L1 5683 6148 -6 * 6001 94 30 10 chr2 67197144 67197358 -183490496 + L1PA10 LINE L1 5221 5429 -1054 2262 96 0 10 chr2 67197358 67197661 -183490193 + AluSc SINE Alu 1 300 -9 6001 94 30 10 chr2 67197661 67198695 -183489159 + L1PA10 LINE L1 5429 6479 -4 1877 195 150 4 chr2 67198721 67199240 -183488614 - L1MC4 LINE L1 -796 7246 6652 2427 85 0 13 chr2 67200702 67201018 -183486836 - AluSx SINE Alu 0 312 1 298 157 0 43 chr2 67201503 67201573 -183486281 + L1MD3 LINE L1 7911 7977 -18 22 35 0 0 chr2 67202007 67202036 -183485818 + AT_rich Low_complexity Low_complexity 1 29 0 201 209 15 15 chr2 67202313 67202380 -183485474 + T-rich Low_complexity Low_complexity 1 67 0 521 280 122 16 chr2 67202819 67203016 -183484838 - MIR SINE MIR -11 251 30 538 200 213 6 chr2 67203056 67203216 -183484638 + MIR SINE MIR 70 262 0 1471 215 86 65 chr2 67204961 67205523 -183482331 - L1MD2 LINE L1 -15 6344 5766 2238 86 7 3 chr2 67205523 67205815 -183482039 - AluSc SINE Alu -15 294 2 1471 215 86 65 chr2 67205815 67205867 -183481987 - L1MD2 LINE L1 -593 5766 5717 2324 95 10 0 chr2 67206212 67206517 -183481337 - AluSx SINE Alu -4 308 1 235 282 59 24 chr2 67206684 67206769 -183481085 + MIR3 SINE MIR 108 195 -13 497 299 72 19 chr2 67208018 67208225 -183479629 + MIR SINE MIR 20 237 -25 262 232 48 104 chr2 67208240 67208365 -183479489 + MIR SINE MIR 112 229 -33 1632 178 28 0 chr2 67208658 67208945 -183478909 + AluJo SINE Alu 1 295 -17 1909 127 10 3 chr2 67209813 67210104 -183477750 + AluSx SINE Alu 1 293 -19 2442 55 10 0 chr2 67210107 67210414 -183477440 + AluY SINE Alu 1 310 -1 1435 181 0 26 chr2 67211120 67211385 -183476469 + AluJo SINE Alu 36 293 -19 475 191 105 129 chr2 67211521 67211643 -183476211 + LTR50 LTR ERVL 1 117 -678 2212 104 27 0 chr2 67211643 67211940 -183475914 + AluSx SINE Alu 1 305 -7 475 191 105 129 chr2 67211940 67212027 -183475827 + LTR50 LTR ERVL 117 205 -590 1674 164 71 11 chr2 67212166 67212447 -183475407 + AluJb SINE Alu 1 298 -14 784 232 21 74 chr2 67213307 67213371 -183474483 - L1MC4a LINE L1 -1907 5901 5835 1637 181 3 17 chr2 67213371 67213664 -183474190 + AluJo SINE Alu 2 290 -22 784 232 21 74 chr2 67213664 67213883 -183473971 - L1MC4a LINE L1 -1973 5835 5633 250 260 31 52 chr2 67214495 67214591 -183473263 + L2 LINE L2 2531 2624 -690 441 300 163 0 chr2 67214717 67214877 -183472977 + MIR SINE MIR 25 210 -52 881 244 110 36 chr2 67214907 67215454 -183472400 + MER34B LTR ERV1 1 538 -4 228 182 0 0 chr2 67215459 67215503 -183472351 + T-rich Low_complexity Low_complexity 1 44 0 319 384 28 6 chr2 67215517 67215694 -183472160 + L2 LINE L2 2795 2975 -339 396 254 40 57 chr2 67215778 67215955 -183471899 - LTR16A1 LTR ERVL 0 457 284 3447 148 112 15 chr2 67216231 67216947 -183470907 + LTR48 LTR ERV1 1 785 -2 1678 165 62 14 chr2 67217022 67217591 -183470263 + MER39 LTR ERV1 1 647 -60 2102 198 136 65 chr2 67217597 67218319 -183469535 + LTR19C LTR ERV1 7 779 0 314 324 79 79 chr2 67218722 67219000 -183468854 - L2 LINE L2 -188 3084 2807 287 181 84 24 chr2 67219928 67220011 -183467843 - MER34 LTR ERV1 -5 537 450 674 213 140 73 chr2 67220126 67220441 -183467413 - MER34C LTR ERV1 -220 365 30 2341 93 7 0 chr2 67221247 67221547 -183466307 - AluSp SINE Alu -11 302 1 12234 102 8 23 chr2 67222280 67224436 -183463418 + L1PA7 LINE L1 2 2155 -4306 1325 37 0 0 chr2 67224436 67224597 -183463257 - L1PA2 LINE L1 -2 6153 5993 216 97 0 0 chr2 67224610 67224641 -183463213 + (T)n Simple_repeat Simple_repeat 1 31 0 23086 93 13 5 chr2 67225588 67229358 -183458496 + L1PA7 LINE L1 2147 5932 -537 1277 92 16 5 chr2 67229358 67229542 -183458312 + L1PA7 LINE L1 6284 6469 0 1756 208 126 84 chr2 67229942 67230735 -183457119 + LTR1B LTR ERV1 1 826 0 23 33 0 0 chr2 67230934 67230964 -183456890 + AT_rich Low_complexity Low_complexity 1 30 0 4233 203 72 21 chr2 67231544 67232644 -183455210 + L1MDa LINE L1 18 1258 -5282 2723 201 112 15 chr2 67232631 67233568 -183454286 + L1MDa LINE L1 2315 3397 -3143 * 1936 125 7 14 chr2 67233568 67233855 -183453999 + AluSx SINE Alu 14 298 -14 2723 201 112 15 chr2 67233855 67234054 -183453800 + L1MDa LINE L1 3397 3575 -2965 373 340 20 20 chr2 67234057 67234207 -183453647 + L1MA9 LINE L1 1356 1505 -5991 7790 222 51 26 chr2 67234600 67236336 -183451518 + L1MA9 LINE L1 2072 3764 -3801 1945 145 21 0 chr2 67236336 67236619 -183451235 + AluSx SINE Alu 1 289 -23 7790 222 51 26 chr2 67236619 67238993 -183448861 + L1MA9 LINE L1 3764 6146 -1419 1090 184 9 40 chr2 67238993 67239221 -183448633 - AluJo SINE Alu -19 293 73 1478 218 30 10 chr2 67239221 67239624 -183448230 + L1MA9 LINE L1 6147 6557 -1008 232 217 0 0 chr2 67239794 67239854 -183448000 + L1MA9 LINE L1 6498 6557 -1008 2284 113 0 3 chr2 67239861 67240171 -183447683 + AluSg1 SINE Alu 1 309 0 2322 178 60 13 chr2 67240221 67240350 -183447504 + L1MA9 LINE L1 6576 6698 -1033 180 77 0 0 chr2 67240350 67240376 -183447478 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2322 178 60 13 chr2 67240376 67240892 -183446962 + L1MA9 LINE L1 6698 7261 -470 1579 146 44 58 chr2 67240893 67241116 -183446738 + L1MA9 LINE L1 7367 7585 -146 195 42 0 0 chr2 67241116 67241140 -183446714 + (CA)n Simple_repeat Simple_repeat 1 24 0 1579 146 44 58 chr2 67241140 67241279 -183446575 + L1MA9 LINE L1 7585 7724 -7 1819 200 3 0 chr2 67241298 67241608 -183446246 + AluJo SINE Alu 1 311 -1 690 286 40 7 chr2 67241614 67241918 -183445936 + L1M4 LINE L1 3192 3505 -2641 649 103 11 0 chr2 67241945 67242032 -183445822 + AluSg/x SINE Alu 198 285 -24 1089 196 5 20 chr2 67242032 67242236 -183445618 - AluJo SINE Alu -111 201 1 475 199 60 7 chr2 67242237 67242463 -183445391 - MSTC LTR MaLR -61 304 1 1452 176 19 37 chr2 67242463 67242787 -183445067 + L1MD1 LINE L1 5356 5673 -569 2263 54 11 0 chr2 67242790 67243097 -183444757 - AluY SINE Alu 0 310 1 888 212 11 0 chr2 67243129 67243308 -183444546 + AluJb SINE Alu 129 309 -3 653 205 7 26 chr2 67243309 67243460 -183444394 + L1MD1 LINE L1 5684 5831 -411 7616 130 23 22 chr2 67243468 67245992 -183441862 - L1MA2 LINE L1 -5 7718 5195 7075 160 20 14 chr2 67246858 67247033 -183440821 - L1MA2 LINE L1 -2355 5210 5038 2466 74 3 0 chr2 67247033 67247331 -183440523 - AluSg SINE Alu -11 299 1 7075 160 20 14 chr2 67247331 67249920 -183437934 - L1MA2 LINE L1 -2527 5038 2427 2168 116 7 0 chr2 67249920 67250222 -183437632 - AluSg SINE Alu -6 304 1 7075 160 20 14 chr2 67250222 67250245 -183437609 - L1MA2 LINE L1 -5138 2427 2406 2055 140 60 25 chr2 67250245 67250644 -183437210 + L1MD1 LINE L1 5830 6242 0 351 324 65 9 chr2 67250649 67250757 -183437097 + MER5A DNA MER1_type 70 183 -6 397 317 115 5 chr2 67250763 67250971 -183436883 - L3 LINE CR1 -44 1533 1303 388 219 31 21 chr2 67251059 67251155 -183436699 + MER81 DNA DNA 18 114 0 1309 190 69 17 chr2 67251168 67251515 -183436339 - L1ME1 LINE L1 -1 6165 5801 434 347 117 22 chr2 67251515 67251789 -183436065 - L3 LINE CR1 -459 1118 819 2340 158 49 61 chr2 67251819 67252426 -183435428 - L1MB7 LINE L1 -19 6165 5566 1023 149 21 46 chr2 67252970 67253164 -183434690 - MER5A DNA MER1_type 0 189 1 274 219 96 68 chr2 67253869 67254015 -183433839 + MLT1J LTR MaLR 324 473 -38 262 247 0 103 chr2 67254142 67254191 -183433663 - L2 LINE L2 -188 3084 3048 2001 133 19 91 chr2 67254191 67254618 -183433236 - MLT2C1 LTR ERVL -1 396 1 262 247 0 103 chr2 67254618 67254665 -183433189 - L2 LINE L2 -224 3048 2998 1749 282 69 52 chr2 67255731 67256415 -183431439 + L1MEc LINE L1 102 812 -5584 2129 131 3 0 chr2 67256415 67256712 -183431142 + AluSx SINE Alu 1 298 -14 1749 282 69 52 chr2 67256712 67257080 -183430774 + L1MEc LINE L1 812 1172 -5224 1360 205 115 13 chr2 67257393 67257705 -183430149 + MER2 DNA MER2_type 1 344 0 385 345 3 1 chr2 67257784 67257941 -183429913 - MLT1I LTR MaLR -210 199 69 239 170 0 19 chr2 67258169 67258222 -183429632 + (TA)n Simple_repeat Simple_repeat 2 53 0 327 250 54 33 chr2 67258238 67258330 -183429524 - L1MC4a LINE L1 -1904 5904 5811 777 242 32 28 chr2 67258402 67258687 -183429167 - L1MC4a LINE L1 -1770 6038 5753 238 304 25 0 chr2 67258690 67258769 -183429085 - L1MC4a LINE L1 -2103 5705 5625 1092 279 90 36 chr2 67259432 67259993 -183427861 - L2 LINE L2 -10 3303 2683 2380 53 0 16 chr2 67259993 67260296 -183427558 - AluY SINE Alu -13 298 1 1092 279 90 36 chr2 67260296 67260457 -183427397 - L2 LINE L2 -630 2683 2532 1165 214 147 50 chr2 67262078 67262535 -183425319 + MLT1D LTR MaLR 5 505 0 26 30 0 0 chr2 67262957 67262990 -183424864 + AT_rich Low_complexity Low_complexity 1 33 0 313 117 0 17 chr2 67263373 67263433 -183424421 + L1PA16 LINE L1 6108 6166 0 1154 237 31 24 chr2 67263846 67264133 -183423721 - MLT1E LTR MaLR 0 593 305 399 345 56 14 chr2 67264174 67264316 -183423538 + L2 LINE L2 3123 3270 -2 497 310 7 0 chr2 67264803 67264945 -183422909 - MIR3 SINE MIR 0 208 66 619 246 58 6 chr2 67264964 67265135 -183422719 + MIR SINE MIR 20 199 -63 201 289 0 0 chr2 67265157 67265209 -183422645 + (TA)n Simple_repeat Simple_repeat 1 52 0 230 170 19 19 chr2 67265209 67265262 -183422592 - LTR40a LTR ERVL -78 441 389 252 0 0 0 chr2 67265427 67265455 -183422399 + (GA)n Simple_repeat Simple_repeat 2 29 0 283 245 98 70 chr2 67265536 67265679 -183422175 - LTR40a LTR ERVL -372 147 1 208 355 0 13 chr2 67266900 67266976 -183420878 - L2 LINE L2 -1039 2275 2201 634 273 12 0 chr2 67266988 67267153 -183420701 - LTR67 LTR ERVL -8 549 383 406 263 244 24 chr2 67267527 67267740 -183420114 - MIR SINE MIR -1 261 2 419 330 30 55 chr2 67267785 67267916 -183419938 - L2 LINE L2 -1206 2108 1975 2697 144 10 53 chr2 67267916 67268402 -183419452 - MLT1C LTR MaLR -2 465 1 419 330 30 55 chr2 67268402 67268634 -183419220 - L2 LINE L2 -1339 1975 1754 434 228 96 7 chr2 67269822 67269958 -183417896 + L1MA10 LINE L1 6185 6332 -2 2174 117 0 0 chr2 67272135 67272446 -183415408 - AluSx SINE Alu 0 311 1 454 192 67 10 chr2 67272568 67272672 -183415182 - MER91C DNA MER1_type -30 110 1 * 628 214 71 7 chr2 67272672 67272815 -183415039 + MIR SINE MIR 45 197 -65 1124 276 41 3 chr2 67273951 67274342 -183413512 + LTR16B LTR ERVL 8 413 -51 1287 115 0 0 chr2 67274343 67274517 -183413337 - AluSg/x SINE Alu -21 291 118 311 71 0 36 chr2 67275342 67275398 -183412456 - L1MB3 LINE L1 -2 6181 6128 422 176 0 0 chr2 67275401 67275499 -183412355 - AluJ/FRAM SINE Alu 0 315 218 477 0 0 0 chr2 67275499 67275552 -183412302 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 1573 157 31 42 chr2 67275552 67275839 -183412015 - AluJo SINE Alu -28 284 1 1116 233 46 28 chr2 67276032 67276358 -183411496 - LTR16B LTR ERVL -14 450 119 1860 130 15 18 chr2 67277189 67277519 -183410335 + L1MB1 LINE L1 5849 6177 -12 230 258 15 30 chr2 67279241 67279307 -183408547 + MER5B DNA MER1_type 1 65 -113 1354 215 77 57 chr2 67279319 67279813 -183408041 + L1MD2 LINE L1 5854 6357 -2 515 246 18 9 chr2 67279836 67279946 -183407908 + MER5B DNA MER1_type 68 178 0 513 300 123 17 chr2 67280256 67280663 -183407191 + L1MEc LINE L1 1366 1815 -4581 25 0 0 0 chr2 67280678 67280703 -183407151 + AT_rich Low_complexity Low_complexity 1 25 0 537 268 80 72 chr2 67280804 67281204 -183406650 - MLT1J LTR MaLR 0 511 109 15596 141 36 13 chr2 67282894 67285578 -183402276 + L1M1 LINE L1 19 2763 -4802 3553 175 10 58 chr2 67285564 67286357 -183401497 + L1M1 LINE L1 3077 3783 -3782 * 2213 112 7 0 chr2 67286357 67286652 -183401202 + AluSg SINE Alu 1 297 -13 3553 175 10 58 chr2 67286652 67287045 -183400809 + L1M1 LINE L1 3783 4193 -3372 9542 182 30 20 chr2 67287534 67289759 -183398095 + L1M1 LINE L1 4179 6426 -1139 307 133 0 0 chr2 67289763 67289808 -183398046 + MER30 DNA MER1_type 1 45 -185 239 313 60 0 chr2 67289919 67290002 -183397852 + L2 LINE L2 3175 3262 -10 2224 111 10 3 chr2 67290006 67290304 -183397550 + AluSx SINE Alu 3 302 -10 2325 99 0 0 chr2 67290987 67291291 -183396563 + AluSc SINE Alu 1 304 -5 712 139 12 58 chr2 67291349 67291521 -183396333 - L1MB5 LINE L1 0 6174 6011 29 0 0 0 chr2 67291612 67291641 -183396213 + AT_rich Low_complexity Low_complexity 1 29 0 182 299 45 15 chr2 67291644 67291711 -183396143 - L2 LINE L2 -8 3264 3196 1163 259 80 56 chr2 67293816 67294317 -183393537 + LTR33 LTR ERVL 6 518 -3 1491 186 10 28 chr2 67295233 67295524 -183392330 + AluJo SINE Alu 1 286 -26 2266 90 0 37 chr2 67297804 67298126 -183389728 - AluSq SINE Alu -3 310 1 1936 94 38 0 chr2 67298253 67298520 -183389334 - AluSx SINE Alu -32 280 4 730 196 0 0 chr2 67298521 67298679 -183389175 - L1MB4 LINE L1 -355 5825 5668 2632 35 0 10 chr2 67298681 67298991 -183388863 - AluYb8 SINE Alu -11 307 1 2207 154 34 0 chr2 67299239 67299648 -183388206 - L1MB7 LINE L1 -19 6165 5743 236 194 30 15 chr2 67299830 67299897 -183387957 + (TA)n Simple_repeat Simple_repeat 1 68 0 25 0 0 0 chr2 67299977 67300002 -183387852 + AT_rich Low_complexity Low_complexity 1 25 0 443 100 14 0 chr2 67300348 67300418 -183387436 + (CAGA)n Simple_repeat Simple_repeat 2 72 0 233 335 82 92 chr2 67300516 67301223 -183386631 - L2 LINE L2 0 3272 2569 236 242 22 77 chr2 67301542 67301633 -183386221 - MIR3 SINE MIR -49 159 74 192 167 0 0 chr2 67302928 67302964 -183384890 + L2 LINE L2 3278 3313 0 741 179 58 63 chr2 67303413 67303603 -183384251 - MER5A DNA MER1_type 0 189 1 1317 191 30 3 chr2 67304211 67304514 -183383340 - L1ME3A LINE L1 0 6170 5860 3570 101 21 8 chr2 67304522 67305057 -183382797 - L1PA14 LINE L1 -3 6158 5617 340 154 0 0 chr2 67305158 67305210 -183382644 + MER30 DNA MER1_type 179 230 0 6537 111 22 18 chr2 67305210 67306160 -183381694 + L1MA2 LINE L1 5006 5965 -339 2431 58 0 3 chr2 67306160 67306455 -183381399 + AluY SINE Alu 1 294 -17 6537 111 22 18 chr2 67306455 67306797 -183381057 + L1MA2 LINE L1 5965 6304 0 1415 161 129 38 chr2 67306805 67307146 -183380708 + MSTD LTR MaLR 25 396 0 276 333 0 0 chr2 67308298 67308379 -183379475 - MIR SINE MIR -106 156 76 1673 164 50 7 chr2 67308487 67308785 -183379069 + AluJo SINE Alu 1 311 -1 313 289 74 16 chr2 67309133 67309254 -183378600 + L1MC4a LINE L1 6672 6799 -1009 2264 124 0 0 chr2 67309367 67309674 -183378180 + AluSq SINE Alu 1 307 -6 360 0 0 0 chr2 67309888 67309928 -183377926 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr2 67309981 67310002 -183377852 + AT_rich Low_complexity Low_complexity 1 21 0 982 204 71 30 chr2 67310921 67311163 -183376691 - MIR SINE MIR -6 256 7 432 0 0 0 chr2 67311454 67311502 -183376352 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 204 150 0 25 chr2 67312990 67313030 -183374824 + (CAAAAA)n Simple_repeat Simple_repeat 1 39 0 37489 41 3 4 chr2 67313402 67315256 -183372598 + L1P LINE L1 1 1855 -4291 2874 16 0 0 chr2 67315256 67315570 -183372284 + AluYb8 SINE Alu 1 314 -4 37489 41 3 4 chr2 67315570 67318540 -183369314 + L1P LINE L1 1855 4821 -1325 1155 123 14 57 chr2 67318549 67318571 -183369283 + AluY SINE Alu 94 115 -196 315 0 0 0 chr2 67318571 67318606 -183369248 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 7129 30 2 0 chr2 67318606 67319449 -183368405 + L1PA4 LINE L1 5311 6155 0 1155 123 14 57 chr2 67319449 67319636 -183368218 + AluY SINE Alu 113 295 -16 5404 149 35 12 chr2 67319742 67319846 -183368008 - L1MA4 LINE L1 -6 6294 6194 2466 68 0 0 chr2 67319846 67320141 -183367713 + AluSq SINE Alu 1 295 -18 5404 149 35 12 chr2 67320141 67321526 -183366328 - L1MA4 LINE L1 -106 6194 4766 1894 162 13 3 chr2 67321859 67322168 -183365686 - AluJb SINE Alu 0 312 1 371 160 32 64 chr2 67322325 67322419 -183365435 + MER104 DNA Tc2 1 91 -89 203 206 44 59 chr2 67323624 67323692 -183364162 + MIR3 SINE MIR 128 194 -14 466 271 53 53 chr2 67323926 67323949 -183363905 - L1ME4a LINE L1 -1 6120 6098 1989 90 4 26 chr2 67323949 67324216 -183363638 + AluSx SINE Alu 33 293 -19 1994 149 0 7 chr2 67324222 67324517 -183363337 + AluJb SINE Alu 1 293 -19 466 271 53 53 chr2 67324517 67324767 -183363087 - L1ME4a LINE L1 -27 6094 5840 734 235 78 42 chr2 67324774 67324991 -183362863 + MIR SINE MIR 17 241 -21 309 125 0 0 chr2 67325004 67325060 -183362794 + (CTA)n Simple_repeat Simple_repeat 3 58 0 380 267 48 0 chr2 67325063 67325209 -183362645 - L1ME4a LINE L1 -286 5835 5683 1460 75 9 13 chr2 67326415 67326642 -183361212 - L1P4 LINE L1 -651 5510 5285 1485 234 44 8 chr2 67326674 67327041 -183360813 - L1ME3A LINE L1 -297 5873 5494 703 216 98 24 chr2 67328424 67328711 -183359143 - HAL1b LINE L1 -29 1319 1012 426 121 0 0 chr2 67328939 67329005 -183358849 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 427 232 255 12 chr2 67329654 67329864 -183357990 - MIR SINE MIR -6 256 3 350 315 32 72 chr2 67331865 67332116 -183355738 - L1ME LINE L1 -375 5746 5506 240 86 0 0 chr2 67332327 67332362 -183355492 + (CA)n Simple_repeat Simple_repeat 1 35 0 620 260 102 8 chr2 67332414 67332746 -183355108 - L1ME LINE L1 -445 5708 5324 4958 118 186 25 chr2 67332746 67333811 -183354043 + MER11B LTR ERVK 1 1236 0 1817 282 80 34 chr2 67333827 67335326 -183352528 - L1ME LINE L1 -840 5289 3722 378 302 71 33 chr2 67335308 67335728 -183352126 - L1ME LINE L1 -5221 898 463 * 2176 128 27 27 chr2 67336077 67336443 -183351411 + MER47A DNA MER2_type 1 366 0 2033 264 71 9 chr2 67337192 67338042 -183349812 - L1M4 LINE L1 -1992 4154 3253 206 362 0 0 chr2 67338565 67338659 -183349195 + (CCA)n Simple_repeat Simple_repeat 3 96 0 1746 106 4 8 chr2 67339451 67339686 -183348168 - AluSq SINE Alu -79 234 1 2370 114 64 55 chr2 67339868 67339916 -183347938 - MSTA LTR MaLR 0 428 382 2061 130 10 0 chr2 67339916 67340217 -183347637 + AluSx SINE Alu 1 304 -8 2370 114 64 55 chr2 67340217 67340590 -183347264 - MSTA LTR MaLR -46 382 3 1366 270 29 29 chr2 67340653 67341109 -183346745 - LTR16A1 LTR ERVL -1 456 1 491 237 117 86 chr2 67341320 67341549 -183346305 - MLT1J1 LTR MaLR 0 446 226 1901 249 75 14 chr2 67341549 67342058 -183345796 - MLT1F LTR MaLR 0 542 3 491 237 117 86 chr2 67342058 67342253 -183345601 - MLT1J1 LTR MaLR -220 226 1 318 246 82 30 chr2 67343414 67343548 -183344306 + MIR SINE MIR 92 232 -30 272 279 29 0 chr2 67343594 67343662 -183344192 - MIR SINE MIR -121 141 72 982 245 89 33 chr2 67344387 67344746 -183343108 + MLT1I LTR MaLR 5 383 -26 2083 145 0 3 chr2 67345195 67345506 -183342348 - AluJb SINE Alu -2 310 1 2254 107 0 10 chr2 67345537 67345847 -183342007 - AluSx SINE Alu -5 307 1 752 178 69 52 chr2 67345910 67346084 -183341770 + MER69A DNA AcHobo 1 177 0 1419 286 89 8 chr2 67346200 67347019 -183340835 - MER45C DNA AcHobo 0 953 30 2074 160 63 24 chr2 67347813 67348194 -183339660 + MSTD LTR MaLR 1 396 0 2873 69 26 3 chr2 67348244 67348635 -183339219 - MLT2A1 LTR ERVL -44 400 1 2187 137 76 37 chr2 67349245 67349653 -183338201 - MSTC LTR MaLR -4 424 1 2481 155 113 6 chr2 67349847 67349926 -183337928 + L1MB5 LINE L1 5587 5656 -518 2000 113 0 0 chr2 67349926 67350208 -183337646 + AluY SINE Alu 27 308 -3 2481 155 113 6 chr2 67350208 67350652 -183337202 + L1MB5 LINE L1 5656 6166 -8 277 349 121 0 chr2 67351294 67351460 -183336394 + L3b LINE CR1 1278 1463 -120 186 377 0 0 chr2 67352194 67352255 -183335599 - MIR SINE MIR -140 122 62 23 0 0 0 chr2 67352327 67352350 -183335504 + AT_rich Low_complexity Low_complexity 1 23 0 3340 109 22 5 chr2 67353470 67354094 -183333760 - L1P5 LINE L1 -361 5795 5163 400 309 148 26 chr2 67354120 67354350 -183333504 + L1M4 LINE L1 2235 2492 -3654 588 285 71 78 chr2 67354380 67354804 -183333050 - LTR33 LTR ERVL -4 517 97 25 56 0 42 chr2 67355078 67355150 -183332704 + AT_rich Low_complexity Low_complexity 1 69 0 1876 131 10 21 chr2 67355487 67355810 -183332044 + AluSx SINE Alu 1 312 0 375 333 54 22 chr2 67356679 67356901 -183330953 + L2 LINE L2 2484 2712 -602 341 306 81 137 chr2 67356928 67357062 -183330792 + L2 LINE L2 2858 2998 -274 10359 27 7 140 chr2 67357062 67358656 -183329198 + SVA Other Other 5 1386 0 341 306 81 137 chr2 67358656 67358952 -183328902 + L2 LINE L2 2998 3264 -8 9318 203 28 11 chr2 67360391 67363299 -183324555 - L1PA15 LINE L1 0 6165 3220 580 186 72 60 chr2 67363693 67363860 -183323994 - MER96 DNA MER1_type? 0 175 7 526 225 82 76 chr2 67363904 67364108 -183323746 - MIR SINE MIR -60 202 2 23 33 0 0 chr2 67364678 67364708 -183323146 + AT_rich Low_complexity Low_complexity 1 30 0 312 233 117 50 chr2 67364810 67364930 -183322924 - MIR3 SINE MIR -78 130 3 204 40 0 0 chr2 67364965 67364990 -183322864 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 744 226 42 47 chr2 67365481 67365671 -183322183 - MIR SINE MIR -46 216 28 633 288 118 19 chr2 67416036 67416408 -183271446 - HAL1 LINE L1 -845 1662 1254 2212 109 0 3 chr2 67416585 67416879 -183270975 + AluSg SINE Alu 9 301 -9 1098 153 42 11 chr2 67417089 67417279 -183270575 + AluJo SINE Alu 11 206 -106 1833 103 0 42 chr2 67417379 67417640 -183270214 - AluSc SINE Alu -45 264 15 180 246 0 33 chr2 67418704 67418765 -183269089 + L2 LINE L2 2294 2352 -962 250 241 0 35 chr2 67418872 67418930 -183268924 + L2 LINE L2 3192 3247 -25 360 313 69 37 chr2 67419238 67419468 -183268386 + L1MEd LINE L1 878 1161 -1329 1848 106 0 0 chr2 67419468 67419705 -183268149 + AluSq SINE Alu 1 237 -76 344 359 16 31 chr2 67419817 67420009 -183267845 - L3 LINE CR1 -138 1439 1251 548 300 36 39 chr2 67420105 67420248 -183267606 + L1ME LINE L1 5254 5396 -770 806 189 0 0 chr2 67420248 67420380 -183267474 + FLAM_C SINE Alu 1 132 -1 548 300 36 39 chr2 67420380 67420566 -183267288 + L1ME LINE L1 5396 5582 -584 305 342 103 0 chr2 67420719 67420874 -183266980 + L2 LINE L2 3101 3271 -1 530 317 168 4 chr2 67420916 67421184 -183266670 + L3 LINE CR1 700 1011 -566 180 0 0 0 chr2 67422338 67422358 -183265496 + (TA)n Simple_repeat Simple_repeat 1 20 0 892 149 0 0 chr2 67422372 67422493 -183265361 - FLAM_C SINE Alu -11 122 2 436 269 99 35 chr2 67422697 67422759 -183265095 - MIR SINE MIR -1 261 204 1394 170 129 44 chr2 67422759 67423076 -183264778 + MER2 DNA MER2_type 1 344 0 436 269 99 35 chr2 67423076 67423214 -183264640 - MIR SINE MIR -58 204 48 307 226 145 153 chr2 67423615 67423863 -183263991 - MIR SINE MIR 0 262 17 414 232 70 92 chr2 67423864 67424006 -183263848 + MLT1E LTR MaLR 9 147 -446 1496 255 70 5 chr2 67424039 67424408 -183263446 + MLT1E LTR MaLR 201 593 0 44 84 0 0 chr2 67424817 67424924 -183262930 + AT_rich Low_complexity Low_complexity 1 107 0 2411 80 0 3 chr2 67425308 67425608 -183262246 + AluY SINE Alu 1 299 -12 836 119 0 8 chr2 67426634 67426768 -183261086 - L1MA7 LINE L1 -4 6287 6155 522 231 111 0 chr2 67426768 67426876 -183260978 - FLAM_A SINE Alu -22 120 1 1166 101 35 75 chr2 67426876 67426915 -183260939 - L1MA7 LINE L1 -124 6167 6128 2220 106 0 3 chr2 67426915 67427216 -183260638 + AluSg SINE Alu 1 300 -10 1166 101 35 75 chr2 67427216 67427403 -183260451 - L1MA7 LINE L1 -163 6128 5950 225 0 0 0 chr2 67427874 67427899 -183259955 + (TG)n Simple_repeat Simple_repeat 2 26 0 314 298 166 57 chr2 67428576 67428979 -183258875 - L1M2 LINE L1 -5878 971 525 226 222 56 0 chr2 67429533 67429587 -183258267 + L2 LINE L2 3252 3308 -5 203 286 32 32 chr2 67429874 67429937 -183257917 + L2 LINE L2 3205 3267 -5 561 246 97 0 chr2 67430013 67430147 -183257707 + L2 LINE L2 2448 2594 -720 202 310 69 0 chr2 67430200 67430258 -183257596 + MER91C DNA MER1_type 49 110 -30 1370 255 104 17 chr2 67430267 67430928 -183256926 + L2 LINE L2 2602 3313 0 2220 103 3 7 chr2 67431228 67431520 -183256334 - AluSx SINE Alu -21 291 1 21 0 0 0 chr2 67432614 67432635 -183255219 + AT_rich Low_complexity Low_complexity 1 21 0 335 341 173 31 chr2 67433328 67433971 -183253883 - L2 LINE L2 0 3313 2536 1843 191 38 30 chr2 67433971 67434342 -183253512 - MLT1A2 LTR MaLR 0 374 1 335 341 173 31 chr2 67434342 67434438 -183253416 - L2 LINE L2 -777 2536 2455 763 144 0 0 chr2 67434440 67434544 -183253310 + AluSc SINE Alu 2 105 -204 411 267 7 59 chr2 67434551 67434686 -183253168 - MLT1K LTR MaLR -62 526 399 282 292 14 0 chr2 67434686 67434758 -183253096 - L2 LINE L2 -4 3309 3237 450 209 0 0 chr2 67434760 67434846 -183253008 + L1ME3A LINE L1 4078 4163 -1983 2374 87 0 3 chr2 67434873 67435172 -183252682 + AluSc SINE Alu 1 298 -11 715 215 104 59 chr2 67435181 67435334 -183252520 + L1ME3A LINE L1 5167 5312 -858 1487 6 0 0 chr2 67435334 67435492 -183252362 + L1PA2 LINE L1 5998 6155 0 715 215 104 59 chr2 67435492 67436111 -183251743 + L1ME3A LINE L1 5312 6170 0 790 263 77 42 chr2 67436160 67436472 -183251382 - MLT1K LTR MaLR -180 408 86 362 337 64 44 chr2 67436936 67437185 -183250669 + L2 LINE L2 3019 3272 0 369 253 200 33 chr2 67437203 67437353 -183250501 - MIR SINE MIR -73 189 15 216 267 33 0 chr2 67437760 67437820 -183250034 + L2 LINE L2 3252 3313 0 2717 104 19 16 chr2 67437930 67438304 -183249550 + THE1C LTR MaLR 1 375 0 294 29 0 0 chr2 67438612 67438647 -183249207 + (CA)n Simple_repeat Simple_repeat 2 36 0 214 106 43 0 chr2 67438653 67438700 -183249154 + GA-rich Low_complexity Low_complexity 2 50 0 26 0 0 0 chr2 67440186 67440212 -183247642 + AT_rich Low_complexity Low_complexity 1 26 0 31 44 0 0 chr2 67440397 67440442 -183247412 + AT_rich Low_complexity Low_complexity 1 45 0 2224 96 0 0 chr2 67440442 67440746 -183247108 - AluSg SINE Alu 0 304 1 2211 110 0 7 chr2 67440894 67441203 -183246651 - AluSx SINE Alu -5 307 1 3608 194 48 26 chr2 67441208 67442070 -183245784 - L1ME1 LINE L1 -18 6148 5271 425 228 47 8 chr2 67442089 67442216 -183245638 - L1ME4a LINE L1 -34 6087 5956 1355 253 86 76 chr2 67442383 67443102 -183244752 + HAL1 LINE L1 701 1411 -1096 1743 163 0 20 chr2 67443102 67443397 -183244457 + AluJb SINE Alu 1 289 -23 1355 253 86 76 chr2 67443397 67444130 -183243724 + HAL1 LINE L1 1411 2483 -24 727 197 0 36 chr2 67444131 67444268 -183243586 + FLAM_A SINE Alu 1 132 -1 711 268 57 35 chr2 67444289 67444517 -183243337 - L1ME4a LINE L1 -437 5684 5468 2156 122 3 0 chr2 67444517 67444813 -183243041 + AluSg SINE Alu 1 297 -13 711 268 57 35 chr2 67444813 67444848 -183243006 - L1ME4a LINE L1 -653 5468 5435 5526 50 108 8 chr2 67444865 67446021 -183241833 - SVA Other Other -955 1385 3 411 264 0 0 chr2 67446028 67446153 -183241701 + T-rich Low_complexity Low_complexity 1 125 0 37 161 0 0 chr2 67446154 67446216 -183241638 + GC_rich Low_complexity Low_complexity 1 62 0 497 289 52 38 chr2 67446850 67447061 -183240793 - L1MC/D LINE L1 -2211 5597 5384 632 193 85 45 chr2 67447287 67447510 -183240344 - L1MC5 LINE L1 -36 7925 7694 841 182 0 8 chr2 67447552 67447684 -183240170 + FRAM SINE Alu 20 150 -26 1069 192 39 87 chr2 67447690 67448002 -183239852 - L1ME3A LINE L1 -56 6114 5818 792 198 71 121 chr2 67448063 67448157 -183239697 - L1ME3A LINE L1 -367 5803 5706 1622 96 175 0 chr2 67448157 67448408 -183239446 + AluSg SINE Alu 1 295 -15 792 198 71 121 chr2 67448408 67448652 -183239202 - L1ME3A LINE L1 -464 5706 5482 764 262 18 0 chr2 67448653 67448817 -183239037 - LTR16A LTR ERVL -20 430 264 691 137 0 20 chr2 67448818 67448920 -183238934 - AluJb SINE Alu -12 300 201 2052 150 3 0 chr2 67448968 67449274 -183238580 - AluSx SINE Alu -5 307 1 1160 149 0 0 chr2 67449606 67449781 -183238073 - AluSp SINE Alu -18 295 121 626 196 152 25 chr2 67449948 67450053 -183237801 - MER5A DNA MER1_type -2 187 54 481 60 194 0 chr2 67450053 67450120 -183237734 + MADE1 DNA Mariner 1 80 0 626 196 152 25 chr2 67450120 67450172 -183237682 - MER5A DNA MER1_type -135 54 10 2369 98 3 0 chr2 67450391 67450697 -183237157 + AluSq SINE Alu 1 307 -6 22 35 0 0 chr2 67450964 67450993 -183236861 + AT_rich Low_complexity Low_complexity 1 29 0 2289 92 0 3 chr2 67451301 67451594 -183236260 + AluSg SINE Alu 1 292 -18 207 0 0 0 chr2 67451609 67451632 -183236222 + (CA)n Simple_repeat Simple_repeat 2 24 0 738 261 63 89 chr2 67452338 67452889 -183234965 - MER34 LTR ERV1 -3 539 3 2437 80 10 0 chr2 67453062 67453363 -183234491 - AluSp SINE Alu -9 304 1 2437 72 0 7 chr2 67454236 67454540 -183233314 - AluY SINE Alu -9 302 1 1977 127 6 32 chr2 67454695 67455011 -183232843 - AluSx SINE Alu -4 308 1 887 175 25 6 chr2 67455210 67455370 -183232484 - MER3 DNA MER1_type -46 163 1 603 262 44 44 chr2 67455538 67455597 -183232257 - MIR SINE MIR -8 254 196 4598 111 19 3 chr2 67455597 67456239 -183231615 + MER39B LTR ERV1 1 652 -1 603 262 44 44 chr2 67456239 67456385 -183231469 - MIR SINE MIR -65 197 49 22 0 0 0 chr2 67456835 67456857 -183230997 + AT_rich Low_complexity Low_complexity 1 22 0 2233 102 7 0 chr2 67457111 67457414 -183230440 - AluSp SINE Alu -8 305 1 216 97 0 0 chr2 67458495 67458526 -183229328 + (TA)n Simple_repeat Simple_repeat 1 31 0 615 288 88 102 chr2 67459250 67459564 -183228290 - L1ME3A LINE L1 -273 5897 5580 432 37 0 0 chr2 67459564 67459618 -183228236 + (CA)n Simple_repeat Simple_repeat 1 54 0 615 288 88 102 chr2 67459618 67459937 -183227917 - L1ME3A LINE L1 -590 5580 5259 2962 171 35 15 chr2 67459937 67460475 -183227379 + MER44D DNA MER2_type 2 605 0 615 288 88 102 chr2 67460475 67460710 -183227144 - L1ME3A LINE L1 -911 5259 5022 411 343 7 15 chr2 67460945 67461082 -183226772 + L2 LINE L2 2560 2695 -619 331 127 18 0 chr2 67461082 67461137 -183226717 + MIR SINE MIR 206 261 -1 267 31 0 0 chr2 67461156 67461188 -183226666 + (TTA)n Simple_repeat Simple_repeat 3 34 0 2331 88 0 3 chr2 67461407 67461704 -183226150 + AluSc SINE Alu 1 296 -13 626 223 36 18 chr2 67461794 67461960 -183225894 - LTR41 LTR ERVL 0 773 605 586 134 80 139 chr2 67461983 67462170 -183225684 - MER106A DNA MER1_type -26 210 35 739 159 53 24 chr2 67462442 67462612 -183225242 - LTR41 LTR ERVL -588 185 11 1531 98 15 0 chr2 67462746 67462949 -183224905 + AluSp SINE Alu 1 206 -107 2148 69 0 4 chr2 67462949 67463211 -183224643 + AluY SINE Alu 40 300 -11 196 346 10 10 chr2 67463806 67463907 -183223947 + MIR3 SINE MIR 54 154 -54 1988 128 7 29 chr2 67463957 67464263 -183223591 + AluJb SINE Alu 1 299 -13 2524 77 0 3 chr2 67464476 67464786 -183223068 + AluSg SINE Alu 1 309 -1 252 246 0 0 chr2 67464786 67464855 -183222999 + (CATATA)n Simple_repeat Simple_repeat 5 73 0 578 284 131 53 chr2 67465024 67465229 -183222625 + LTR33 LTR ERVL 21 209 -312 2392 69 3 13 chr2 67465229 67465532 -183222322 - AluSg1 SINE Alu -9 300 1 578 284 131 53 chr2 67465532 67465738 -183222116 + LTR33 LTR ERVL 209 464 -57 364 177 0 0 chr2 67465740 67465802 -183222052 + Alu SINE Alu 240 301 0 320 161 0 32 chr2 67465805 67465867 -183221987 + LTR33 LTR ERVL 456 515 -6 1862 98 116 33 chr2 67465928 67466204 -183221650 - AluSg SINE Alu -11 299 1 192 40 0 0 chr2 67466290 67466315 -183221539 + (TACTG)n Simple_repeat Simple_repeat 1 25 0 1918 147 29 20 chr2 67466632 67466938 -183220916 - AluJb SINE Alu -2 310 2 1070 274 103 52 chr2 67467550 67468387 -183219467 - L2 LINE L2 -5 3308 2418 2336 93 7 0 chr2 67468932 67469234 -183218620 + AluY SINE Alu 1 304 -7 213 296 250 15 chr2 67470538 67470670 -183217184 + MIR SINE MIR 13 175 -87 478 298 124 28 chr2 67470920 67471283 -183216571 - MLT1K LTR MaLR -23 565 168 247 286 0 32 chr2 67471300 67471361 -183216493 - MLT1L LTR MaLR -409 206 148 226 198 306 25 chr2 67471361 67471482 -183216372 + MER20B DNA MER1_type 1 155 -628 2302 103 0 3 chr2 67471843 67472144 -183215710 + AluSq SINE Alu 1 300 -13 2101 92 39 4 chr2 67472148 67472429 -183215425 + AluSc SINE Alu 7 297 -12 2022 93 21 10 chr2 67472455 67472746 -183215108 - AluY SINE Alu -17 294 1 846 213 17 23 chr2 67472746 67472920 -183214934 - AluSg/x SINE Alu -17 293 121 644 174 101 55 chr2 67472930 67473251 -183214603 + LTR56-int LTR ERV1 1192 3137 -3194 2319 99 0 0 chr2 67473252 67473556 -183214298 + AluSq SINE Alu 1 304 -9 296 243 57 68 chr2 67473600 67473777 -183214077 + LTR56-int LTR ERV1 1679 1853 -3083 1964 103 18 3 chr2 67473865 67474147 -183213707 + AluSx SINE Alu 1 286 -26 623 202 6 44 chr2 67474167 67474348 -183213506 + LTR56-int LTR ERV1 1607 2865 -2015 1231 117 0 4 chr2 67474348 67474570 -183213284 + AluSq SINE Alu 2 304 -9 5874 157 37 42 chr2 67474570 67474717 -183213137 + LTR56-int LTR ERV1 4413 4559 -564 2287 106 0 3 chr2 67474717 67475019 -183212835 + AluSq SINE Alu 3 303 -10 2035 129 0 16 chr2 67475021 67475324 -183212530 + AluSg SINE Alu 3 300 -10 5874 157 37 42 chr2 67475324 67475415 -183212439 + LTR56-int LTR ERV1 4560 4650 -473 1943 133 20 0 chr2 67475415 67475708 -183212146 - AluSx SINE Alu -13 299 1 5874 157 37 42 chr2 67475708 67476882 -183210972 + LTR56-int LTR ERV1 4650 5027 -96 1276 172 51 76 chr2 67476965 67477438 -183210416 + LTR56 LTR ERV1 9 437 0 706 206 47 29 chr2 67477438 67477607 -183210247 + MLT1J LTR MaLR 10 181 -330 4270 125 68 37 chr2 67477612 67478253 -183209601 - LTR8A LTR ERV1 0 727 61 2371 87 0 3 chr2 67478253 67478553 -183209301 - AluY SINE Alu -12 299 1 4270 125 68 37 chr2 67478553 67478616 -183209238 - LTR8A LTR ERV1 -666 61 1 549 138 11 11 chr2 67478616 67478703 -183209151 - LTR8 LTR ERV1 -524 167 81 2393 78 251 0 chr2 67478703 67479061 -183208793 - LTR7 LTR ERV1 -2 448 1 2445 82 53 16 chr2 67479061 67479439 -183208415 - HERVH LTR ERV1 0 7713 7322 1240 127 36 41 chr2 67479437 67479598 -183208256 - HERVH LTR ERV1 -1894 5819 5658 * 1714 145 117 70 chr2 67479598 67480026 -183207828 + LTR7 LTR ERV1 1 448 -2 1240 127 36 41 chr2 67480026 67480085 -183207769 - HERVH LTR ERV1 -2055 5658 5600 4275 138 20 1 chr2 67480086 67480736 -183207118 - HERVH LTR ERV1 -2564 5149 4488 3435 107 4 4 chr2 67480738 67481232 -183206622 - HERVH LTR ERV1 -3720 3993 3500 876 151 20 0 chr2 67481231 67481377 -183206477 - HERVH LTR ERV1 -4423 3290 3142 * 6866 88 6 7 chr2 67481373 67482330 -183205524 - HERVH LTR ERV1 -4726 2987 2032 458 309 82 104 chr2 67482975 67483130 -183204724 - L2 LINE L2 -1 3271 3114 4859 89 25 7 chr2 67483130 67483857 -183203997 + L1MA3 LINE L1 5566 6305 0 458 309 82 104 chr2 67483857 67484280 -183203574 - L2 LINE L2 -158 3114 2710 2110 116 3 0 chr2 67484280 67484573 -183203281 + AluSq SINE Alu 1 294 -19 458 309 82 104 chr2 67484573 67484796 -183203058 - L2 LINE L2 -562 2710 2484 1647 126 3 86 chr2 67484835 67485184 -183202670 + LTR9 LTR ERV1 1 320 -292 462 323 83 30 chr2 67485204 67485562 -183202292 - L2 LINE L2 -1198 2116 1736 1772 82 4 9 chr2 67485562 67485793 -183202061 - AluY SINE Alu -81 230 1 462 323 83 30 chr2 67485793 67485806 -183202048 - L2 LINE L2 -1578 1736 1725 370 296 173 18 chr2 67485808 67486028 -183201826 - L2 LINE L2 -1884 1430 1177 787 285 51 7 chr2 67486078 67486352 -183201502 - MLT1J LTR MaLR -2 509 224 662 91 10 0 chr2 67486356 67486455 -183201399 + LTR8A LTR ERV1 1 100 -627 453 118 0 0 chr2 67486455 67486523 -183201331 + LTR7 LTR ERV1 1 68 -382 7862 73 8 37 chr2 67486526 67487748 -183200106 + HERVH LTR ERV1 665 1851 -5862 191 329 91 103 chr2 67488017 67488192 -183199662 + L2 LINE L2 2945 3116 -156 4274 139 25 8 chr2 67488192 67488920 -183198934 - L1MA3 LINE L1 0 6305 5566 191 329 91 103 chr2 67488920 67489075 -183198779 + L2 LINE L2 3116 3271 -1 2300 107 3 0 chr2 67491047 67491345 -183196509 + AluSp SINE Alu 1 299 -14 351 245 94 9 chr2 67492232 67492338 -183195516 - MARNA DNA Mariner -16 570 456 237 167 0 37 chr2 67492372 67492426 -183195428 + GA-rich Low_complexity Low_complexity 3 54 0 1882 113 10 23 chr2 67492663 67492964 -183194890 - AluSx SINE Alu -15 297 1 196 216 371 17 chr2 67493573 67493689 -183194165 + MIR3 SINE MIR 45 201 -7 184 364 0 0 chr2 67494092 67494147 -183193707 - L2 LINE L2 -1 3271 3217 404 309 63 44 chr2 67494204 67494456 -183193398 + MIR SINE MIR 2 258 -4 2526 24 40 0 chr2 67494607 67494904 -183192950 - AluYa5 SINE Alu -2 309 1 1562 235 101 82 chr2 67495466 67496436 -183191418 + L2 LINE L2 2318 3301 -12 2286 101 0 7 chr2 67496449 67496755 -183191099 + AluSx SINE Alu 1 304 -8 1729 181 0 7 chr2 67496955 67497253 -183190601 + AluJb SINE Alu 1 296 -16 2182 83 7 0 chr2 67497410 67497687 -183190167 + AluY SINE Alu 26 304 -7 2053 79 11 0 chr2 67501334 67501601 -183186253 - AluSp SINE Alu -43 270 1 216 322 134 20 chr2 67504637 67504799 -183183055 + MIR3 SINE MIR 15 194 -14 333 0 0 0 chr2 67504824 67504861 -183182993 + (CA)n Simple_repeat Simple_repeat 2 38 0 504 121 169 0 chr2 67504886 67504969 -183182885 - FLAM_A SINE Alu -26 116 20 615 252 31 13 chr2 67505697 67505856 -183181998 - MIR SINE MIR -1 261 100 22 35 0 0 chr2 67505936 67505965 -183181889 + AT_rich Low_complexity Low_complexity 1 29 0 2093 125 0 13 chr2 67506385 67506689 -183181165 - AluSx SINE Alu -12 300 1 22 0 0 0 chr2 67506979 67507001 -183180853 + AT_rich Low_complexity Low_complexity 1 22 0 2431 77 3 0 chr2 67507484 67507784 -183180070 - AluSg SINE Alu -9 301 1 255 204 0 0 chr2 67507979 67508033 -183179821 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 930 181 0 6 chr2 67508034 67508194 -183179660 - FAM SINE Alu -13 162 4 2028 124 7 16 chr2 67508495 67508801 -183179053 - AluJb SINE Alu -9 303 1 293 300 62 24 chr2 67508960 67509147 -183178707 + MER20B DNA MER1_type 2 198 -21 217 176 20 20 chr2 67509805 67509856 -183177998 - L2 LINE L2 -5 3308 3258 434 247 152 101 chr2 67509898 67510246 -183177608 - L3 LINE CR1 -8 1569 1204 180 176 0 0 chr2 67511088 67511122 -183176732 + (CATATA)n Simple_repeat Simple_repeat 6 39 0 197 171 86 0 chr2 67511174 67511209 -183176645 - L2 LINE L2 -15 3298 3261 * 407 298 120 47 chr2 67511180 67511371 -183176483 - MIR SINE MIR -18 244 40 568 242 72 7 chr2 67512269 67512422 -183175432 - MIR3 SINE MIR -15 193 31 2163 117 7 19 chr2 67512582 67512891 -183174963 - AluSx SINE Alu -7 305 1 2342 116 0 0 chr2 67513325 67513635 -183174219 - AluSx SINE Alu 0 312 3 2848 211 71 24 chr2 67514218 67515058 -183172796 + L1MDa LINE L1 3 1121 -5419 2251 110 3 3 chr2 67515058 67515368 -183172486 + AluSx SINE Alu 1 310 -2 2848 211 71 24 chr2 67515368 67515449 -183172405 + L1MDa LINE L1 1121 1197 -5343 1400 204 176 7 chr2 67515451 67515622 -183172232 + L1MDa LINE L1 1418 1559 -4981 2341 103 3 3 chr2 67515622 67515934 -183171920 + AluSx SINE Alu 1 312 0 1400 204 176 7 chr2 67515934 67516345 -183171509 + L1MDa LINE L1 1559 2215 -4325 1850 103 4 0 chr2 67516346 67516588 -183171266 + AluSx SINE Alu 44 286 -26 22 35 0 0 chr2 67517080 67517109 -183170745 + AT_rich Low_complexity Low_complexity 1 29 0 39 22 0 0 chr2 67517615 67517661 -183170193 + AT_rich Low_complexity Low_complexity 1 46 0 231 167 157 20 chr2 67517661 67517763 -183170091 - MER113 DNA MER1_type? -274 247 132 2495 67 0 0 chr2 67519069 67519367 -183168487 - AluY SINE Alu -13 298 1 469 232 20 26 chr2 67519372 67519523 -183168331 - L1MC5 LINE L1 -36 7925 7776 531 159 88 18 chr2 67519525 67519638 -183168216 - MER6 DNA MER2_type 0 865 745 2039 122 65 0 chr2 67519638 67519992 -183167862 + L1PB4 LINE L1 5602 5978 -178 516 246 73 0 chr2 67521912 67522022 -183165832 - FLAM_A SINE Alu -19 123 6 181 376 68 34 chr2 67522122 67522239 -183165615 + L2 LINE L2 2992 3112 -160 24 32 0 0 chr2 67522924 67522955 -183164899 + AT_rich Low_complexity Low_complexity 1 31 0 207 162 0 0 chr2 67523028 67523065 -183164789 + (TA)n Simple_repeat Simple_repeat 2 38 0 383 82 0 0 chr2 67523100 67523161 -183164693 + MER2 DNA MER2_type 152 212 -133 2243 113 0 10 chr2 67523344 67523645 -183164209 - AluSx SINE Alu -14 298 1 185 296 133 37 chr2 67523667 67523802 -183164052 - L2 LINE L2 -919 2395 2248 568 159 16 2 chr2 67523970 67524150 -183163704 + MER46A DNA MER2_type 1 226 -10 373 244 33 0 chr2 67524526 67524616 -183163238 + MER5A DNA MER1_type 12 104 -85 181 212 0 0 chr2 67525098 67525131 -183162723 - MIR3 SINE MIR -6 202 170 327 336 76 15 chr2 67525316 67525447 -183162407 - MIR3 SINE MIR -67 141 3 2124 122 7 3 chr2 67528348 67528651 -183159203 + AluSc SINE Alu 1 304 -5 2378 87 0 3 chr2 67529697 67529995 -183157859 + AluY SINE Alu 1 297 -14 216 200 0 0 chr2 67530456 67530501 -183157353 + (CGTG)n Simple_repeat Simple_repeat 2 46 0 476 271 86 14 chr2 67530957 67531097 -183156757 + L2 LINE L2 3164 3313 0 1038 156 9 38 chr2 67531184 67531395 -183156459 - MER3 DNA MER1_type 0 209 5 402 281 116 6 chr2 67533720 67533884 -183153970 + MIR SINE MIR 81 262 0 459 190 16 50 chr2 67534025 67534146 -183153708 - MIR SINE MIR -9 253 137 1209 266 90 9 chr2 67534209 67534555 -183153299 + MLT2E LTR ERVL 46 419 -209 258 160 22 0 chr2 67534620 67534667 -183153187 + MLT2F LTR ERVL 576 663 0 297 291 36 36 chr2 67534675 67534785 -183153069 - MIR SINE MIR -152 110 1 345 314 6 29 chr2 67534787 67534959 -183152895 + GA-rich Low_complexity Low_complexity 1 168 0 30 0 0 0 chr2 67536133 67536163 -183151691 + AT_rich Low_complexity Low_complexity 1 30 0 293 192 60 18 chr2 67536181 67536348 -183151506 + (TA)n Simple_repeat Simple_repeat 1 174 0 358 283 81 68 chr2 67537228 67537536 -183150318 - LTR67 LTR ERVL 0 557 246 439 286 175 6 chr2 67538102 67538273 -183149581 - MIR SINE MIR -61 201 2 564 275 98 33 chr2 67538982 67539219 -183148635 - MIR SINE MIR -6 256 11 2173 136 32 6 chr2 67539242 67539581 -183148273 - MER7A DNA MER2_type 0 346 1 180 0 0 0 chr2 67539864 67539884 -183147970 + (T)n Simple_repeat Simple_repeat 1 20 0 1184 137 64 0 chr2 67541436 67541670 -183146184 - AluSx SINE Alu -63 249 1 2752 261 89 27 chr2 67541670 67542982 -183144872 + L2 LINE L2 1901 3312 -1 1469 205 25 3 chr2 67543045 67543167 -183144687 + AluJo SINE Alu 1 119 -193 218 54 0 27 chr2 67543167 67543204 -183144650 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 1469 205 25 3 chr2 67543204 67543364 -183144490 + AluJo SINE Alu 119 289 -23 213 39 0 0 chr2 67543570 67543596 -183144258 + (T)n Simple_repeat Simple_repeat 1 26 0 202 378 50 0 chr2 67544582 67544701 -183143153 + L2 LINE L2 3148 3272 0 1087 116 21 5 chr2 67546130 67546319 -183141535 + L1MA7 LINE L1 6099 6290 -1 444 196 22 123 chr2 67546375 67546437 -183141417 + MLT1J LTR MaLR 5 47 -464 2534 53 0 0 chr2 67546437 67546738 -183141116 - AluY SINE Alu -10 301 1 444 196 22 123 chr2 67546738 67546813 -183141041 + MLT1J LTR MaLR 47 128 -383 292 261 0 0 chr2 67546839 67546908 -183140946 + MLT1J LTR MaLR 241 309 -202 2125 126 0 3 chr2 67547556 67547849 -183140005 - AluSx SINE Alu -20 292 1 281 352 59 26 chr2 67547942 67548212 -183139642 + MLT1K LTR MaLR 189 467 -121 792 190 19 0 chr2 67548246 67548404 -183139450 - MER58B DNA MER1_type 0 341 181 1715 173 10 29 chr2 67548932 67549239 -183138615 + AluJo SINE Alu 1 301 -11 272 271 118 14 chr2 67549316 67549460 -183138394 - MARNA DNA Mariner -11 575 417 2298 84 10 0 chr2 67549574 67549870 -183137984 - AluSp SINE Alu -14 299 1 223 312 168 8 chr2 67549918 67550043 -183137811 - L2 LINE L2 -1 3312 3168 23 54 0 0 chr2 67550292 67550329 -183137525 + AT_rich Low_complexity Low_complexity 1 37 0 419 216 45 45 chr2 67550692 67550803 -183137051 + L2 LINE L2 3203 3313 0 266 288 41 0 chr2 67552795 67552868 -183134986 - MER5A DNA MER1_type -73 116 41 21 36 0 0 chr2 67553613 67553641 -183134213 + AT_rich Low_complexity Low_complexity 1 28 0 880 168 0 7 chr2 67553730 67553879 -183133975 - AluJo SINE Alu -164 148 1 2256 94 0 3 chr2 67554675 67554963 -183132891 + AluSc SINE Alu 2 288 -21 1316 101 226 10 chr2 67555084 67555380 -183132474 - MER46B DNA MER2_type -1 235 1 1731 189 164 94 chr2 67555695 67556388 -183131466 + MER21B LTR ERV1 13 754 -109 4498 153 54 22 chr2 67556815 67557758 -183130096 - L1MB8 LINE L1 -10 6168 5200 270 242 44 137 chr2 67558115 67558297 -183129557 + MIR3 SINE MIR 42 206 -2 216 191 0 0 chr2 67558747 67558794 -183129060 + T-rich Low_complexity Low_complexity 1 47 0 2363 77 3 3 chr2 67559214 67559513 -183128341 - AluSp SINE Alu -14 299 1 21 0 0 0 chr2 67562366 67562387 -183125467 + AT_rich Low_complexity Low_complexity 1 21 0 2182 96 7 3 chr2 67563027 67563320 -183124534 + AluY SINE Alu 1 294 -17 2765 134 26 36 chr2 67563918 67564412 -183123442 - Tigger1 DNA MER2_type -1929 489 1 691 199 33 20 chr2 67564457 67564608 -183123246 + MIR SINE MIR 109 261 -1 328 237 72 21 chr2 67565430 67565527 -183122327 + MIR SINE MIR 102 203 -59 362 270 74 55 chr2 67565539 67565702 -183122152 + MIR SINE MIR 49 214 -48 540 194 147 50 chr2 67566268 67566461 -183121393 + MER20 DNA MER1_type 1 217 -2 23 0 0 0 chr2 67567491 67567514 -183120340 + AT_rich Low_complexity Low_complexity 1 23 0 1746 134 34 75 chr2 67567819 67568139 -183119715 - AluJo SINE Alu -5 307 1 253 167 157 20 chr2 67569030 67569132 -183118722 + MER113 DNA MER1_type? 132 247 -274 39 22 0 0 chr2 67569132 67569178 -183118676 + AT_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr2 67569684 67569713 -183118141 + AT_rich Low_complexity Low_complexity 1 29 0 1234 208 4 4 chr2 67570209 67570450 -183117404 - AluSx SINE Alu -27 285 45 408 336 27 7 chr2 67570736 67570885 -183116969 - MLT1I LTR MaLR -229 180 29 484 288 108 54 chr2 67571323 67571545 -183116309 - MIR SINE MIR -6 256 23 897 291 96 80 chr2 67571940 67572377 -183115477 - LTR16A LTR ERVL -13 437 1 362 206 0 0 chr2 67572385 67572453 -183115401 - L2 LINE L2 -220 3052 2985 778 337 138 46 chr2 67572540 67573460 -183114394 - L2 LINE L2 -457 2857 1826 1922 142 24 0 chr2 67573460 67573792 -183114062 + L1MB3 LINE L1 5844 6183 0 778 337 138 46 chr2 67573792 67573928 -183113926 - L2 LINE L2 -1488 1826 1704 2054 107 7 3 chr2 67574452 67574741 -183113113 - AluSc SINE Alu -19 290 1 23 54 0 0 chr2 67574871 67574908 -183112946 + AT_rich Low_complexity Low_complexity 1 37 0 1715 184 0 46 chr2 67575938 67576265 -183111589 - AluJb SINE Alu 0 312 1 2193 114 7 0 chr2 67576294 67576592 -183111262 + AluSx SINE Alu 1 300 -12 246 32 0 0 chr2 67576600 67576631 -183111223 + (GGAA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr2 67576631 67576660 -183111194 + AT_rich Low_complexity Low_complexity 1 29 0 2071 131 3 0 chr2 67577495 67577792 -183110062 + AluSx SINE Alu 1 298 -14 1951 112 7 0 chr2 67577942 67578211 -183109643 + AluY SINE Alu 26 296 -15 2362 91 3 0 chr2 67578296 67578603 -183109251 + AluSc SINE Alu 1 308 -1 243 0 0 0 chr2 67578603 67578630 -183109224 + (TA)n Simple_repeat Simple_repeat 1 27 0 21 71 0 0 chr2 67578967 67579009 -183108845 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 67579133 67579154 -183108700 + AT_rich Low_complexity Low_complexity 1 21 0 548 332 64 10 chr2 67579639 67579841 -183108013 + MIR SINE MIR 2 214 -48 1019 94 87 0 chr2 67579922 67580071 -183107783 - AluSg SINE Alu -9 303 142 711 64 0 0 chr2 67580071 67580165 -183107689 - AluSg SINE Alu -216 94 1 739 279 130 0 chr2 67580263 67580478 -183107376 + MIR SINE MIR 12 254 -8 1776 186 6 6 chr2 67580766 67581078 -183106776 - AluJb SINE Alu 0 312 1 3041 110 16 9 chr2 67584056 67584503 -183103351 - Tigger5 DNA MER2_type 0 2323 1874 585 204 0 0 chr2 67584506 67584604 -183103250 - Tigger5 DNA MER2_type -2225 98 1 1778 211 77 3 chr2 67584628 67584993 -183102861 - MER82 DNA MER2_type 0 653 262 665 236 198 8 chr2 67585022 67585264 -183102590 + L1ME2 LINE L1 5808 6095 -69 287 244 92 17 chr2 67585322 67585441 -183102413 + L1MC5 LINE L1 7790 7917 -44 577 232 83 43 chr2 67585527 67585803 -183102051 + L1MC5 LINE L1 7625 7911 -50 436 294 51 54 chr2 67586976 67587292 -183100562 + L1MEd LINE L1 250 564 -5555 365 254 22 45 chr2 67587334 67587543 -183100311 + L1ME LINE L1 5236 5439 -723 1387 176 109 11 chr2 67587551 67587818 -183100036 + AluJo SINE Alu 5 297 -15 448 312 206 29 chr2 67587983 67588562 -183099292 + L2 LINE L2 2430 3100 -172 2291 84 3 10 chr2 67588587 67588886 -183098968 + AluSg SINE Alu 6 302 -8 189 245 0 20 chr2 67588922 67588971 -183098883 + L2 LINE L2 3266 3313 0 255 61 0 0 chr2 67589455 67589488 -183098366 + (CA)n Simple_repeat Simple_repeat 2 34 0 243 284 15 0 chr2 67590314 67590381 -183097473 - MIR SINE MIR -11 251 184 234 229 29 14 chr2 67590557 67590627 -183097227 - MLT1J LTR MaLR -12 499 429 872 120 8 0 chr2 67590628 67590745 -183097109 + FLAM_C SINE Alu 1 118 -25 31 0 0 0 chr2 67590745 67590776 -183097078 + AT_rich Low_complexity Low_complexity 1 31 0 413 246 59 0 chr2 67590776 67590894 -183096960 - MLT1J LTR MaLR -60 451 327 2338 223 93 91 chr2 67590904 67591456 -183096398 - L1MEc LINE L1 -4259 2137 1588 1878 151 3 7 chr2 67591456 67591754 -183096100 - AluJb SINE Alu -14 298 2 2338 223 93 91 chr2 67591754 67591837 -183096017 - L1MEc LINE L1 -4808 1588 1507 2531 56 3 0 chr2 67591837 67592140 -183095714 + AluY SINE Alu 1 304 -7 2338 223 93 91 chr2 67592140 67592811 -183095043 - L1MEc LINE L1 -4889 1507 827 393 353 67 13 chr2 67592816 67593054 -183094800 + L2 LINE L2 2049 2299 -1015 430 298 44 19 chr2 67593454 67593659 -183094195 + MLT1L LTR MaLR 377 609 -2 373 344 105 52 chr2 67593659 67594419 -183093435 + L2 LINE L2 2467 3272 0 26 64 0 0 chr2 67595875 67595922 -183091932 + GC_rich Low_complexity Low_complexity 1 47 0 2202 92 16 3 chr2 67597592 67597898 -183089956 - AluSg SINE Alu 0 310 1 207 0 0 0 chr2 67597914 67597937 -183089917 + (T)n Simple_repeat Simple_repeat 1 23 0 1183 137 33 56 chr2 67597980 67598050 -183089804 - L1MB7 LINE L1 0 6184 6114 2144 117 0 0 chr2 67598050 67598348 -183089506 + AluSx SINE Alu 1 298 -14 1183 137 33 56 chr2 67598348 67598547 -183089307 - L1MB7 LINE L1 -70 6114 5921 191 204 91 0 chr2 67598787 67598831 -183089023 - MIR3 SINE MIR -3 205 158 191 255 106 0 chr2 67598798 67598845 -183089009 - L3b LINE CR1 -10 1573 1522 25 51 0 0 chr2 67599186 67599225 -183088629 + AT_rich Low_complexity Low_complexity 1 39 0 730 201 161 0 chr2 67599279 67599453 -183088401 + MER20 DNA MER1_type 1 202 -17 208 106 0 43 chr2 67599905 67599952 -183087902 + (TATG)n Simple_repeat Simple_repeat 4 48 0 497 255 20 67 chr2 67600084 67600233 -183087621 + MIR SINE MIR 66 207 -55 1143 124 0 0 chr2 67600895 67601048 -183086806 - AluSg SINE Alu -157 153 1 564 92 0 82 chr2 67601215 67601410 -183086444 + (TA)n Simple_repeat Simple_repeat 2 180 0 1253 274 99 24 chr2 67601410 67602005 -183085849 - L1MC4 LINE L1 -272 7770 7131 221 341 128 44 chr2 67602031 67602719 -183085135 - L2 LINE L2 -1357 1957 1167 2053 122 3 3 chr2 67603379 67603673 -183084181 - AluSc SINE Alu -15 294 1 26 64 0 0 chr2 67603849 67603896 -183083958 + AT_rich Low_complexity Low_complexity 1 47 0 27 29 0 0 chr2 67604224 67604258 -183083596 + AT_rich Low_complexity Low_complexity 1 34 0 2093 126 7 0 chr2 67604817 67605111 -183082743 + AluSx SINE Alu 1 296 -16 383 266 21 0 chr2 67605136 67605230 -183082624 - AluJb SINE Alu -9 293 198 2264 113 0 0 chr2 67605343 67605644 -183082210 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 67605853 67605874 -183081980 + AT_rich Low_complexity Low_complexity 1 21 0 268 349 71 40 chr2 67605877 67606003 -183081851 + MIR SINE MIR 17 146 -62 2214 118 0 3 chr2 67606531 67606828 -183081026 - AluSx SINE Alu -16 296 1 454 358 78 21 chr2 67607324 67607567 -183080287 + L3 LINE CR1 1318 1574 -3 2109 94 17 3 chr2 67608042 67608330 -183079524 + AluSx SINE Alu 2 293 -19 601 275 70 0 chr2 67608355 67608526 -183079328 - MIR SINE MIR -13 249 67 233 327 100 20 chr2 67608751 67608901 -183078953 - L2 LINE L2 -2 3311 3150 371 113 14 28 chr2 67609119 67609190 -183078664 + Charlie4a DNA MER1_type 29 98 -410 335 221 74 4 chr2 67609190 67609338 -183078516 + MER20 DNA MER1_type 1 219 0 1145 194 87 50 chr2 67609338 67609557 -183078297 + Charlie4a DNA MER1_type 91 300 -1661 2679 45 0 0 chr2 67609557 67609868 -183077986 + AluY SINE Alu 1 311 0 1145 194 87 50 chr2 67609868 67609882 -183077972 + Charlie4a DNA MER1_type 300 312 -1649 1942 155 10 0 chr2 67609882 67610173 -183077681 + AluJo SINE Alu 1 294 -18 1145 194 87 50 chr2 67610173 67610341 -183077513 + Charlie4a DNA MER1_type 312 508 0 216 0 0 0 chr2 67610348 67610372 -183077482 + (GATTG)n Simple_repeat Simple_repeat 2 25 0 1739 266 35 23 chr2 67610375 67611100 -183076754 - L1MC4 LINE L1 -566 7476 6744 20726 134 41 10 chr2 67612530 67614800 -183073054 + L1MA3 LINE L1 15 2213 -5352 2063 130 0 3 chr2 67614800 67615092 -183072762 + AluSg SINE Alu 1 291 -19 20726 134 41 10 chr2 67615092 67615710 -183072144 + L1MA3 LINE L1 2213 2810 -4755 2024 134 3 14 chr2 67615710 67616002 -183071852 + AluSx SINE Alu 1 289 -23 20726 134 41 10 chr2 67616002 67616701 -183071153 + L1MA3 LINE L1 2810 3717 -3848 734 167 36 6 chr2 67616710 67616878 -183070976 + L1MA3 LINE L1 3761 3933 -3632 1881 247 55 3 chr2 67616901 67617319 -183070535 + L1MA3 LINE L1 4190 4585 -2980 219 69 0 0 chr2 67617319 67617348 -183070506 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1881 247 55 3 chr2 67617348 67617808 -183070046 + L1MA3 LINE L1 4585 5123 -2442 4350 117 102 21 chr2 67617819 67618828 -183069026 - MER11B LTR ERVK -4 1232 1 7689 47 16 0 chr2 67618828 67619811 -183068043 - HERVK11 LTR ERVK 0 7953 6955 * 8846 60 3 0 chr2 67619797 67620984 -183066870 - HERVK11 LTR ERVK -1186 6767 5525 * 12515 56 22 1 chr2 67620982 67622638 -183065216 - HERVK11 LTR ERVK -3352 4601 2912 * 17729 87 13 0 chr2 67622632 67625094 -183062760 - HERVK11 LTR ERVK -5255 2698 206 2199 96 0 9 chr2 67625091 67625413 -183062441 - HERVK11 LTR ERVK -7634 319 1 * 5443 144 25 53 chr2 67625413 67626515 -183061339 - MER11C LTR ERVK 0 1071 1 6804 161 70 14 chr2 67626523 67628856 -183058998 + L1MA3 LINE L1 5135 7604 -120 351 0 0 0 chr2 67629240 67629279 -183058575 + (TG)n Simple_repeat Simple_repeat 2 40 0 1851 176 3 3 chr2 67629616 67629918 -183057936 - AluJb SINE Alu -5 307 6 197 265 73 15 chr2 67630021 67630089 -183057765 + MIR3 SINE MIR 110 181 -27 24 67 0 0 chr2 67630304 67630349 -183057505 + AT_rich Low_complexity Low_complexity 1 45 0 483 292 82 43 chr2 67630396 67630629 -183057225 - MIR SINE MIR -19 243 2 2371 77 7 0 chr2 67631218 67631515 -183056339 + AluY SINE Alu 1 299 -12 2021 92 67 18 chr2 67631523 67631806 -183056048 + AluSx SINE Alu 1 297 -15 3114 201 30 16 chr2 67631929 67632567 -183055287 - MER82 DNA MER2_type 0 653 7 477 257 9 9 chr2 67634208 67634321 -183053533 - L2 LINE L2 0 3313 3201 2656 245 73 7 chr2 67634346 67635419 -183052435 + L1MEc LINE L1 2053 3054 -3161 2283 109 3 6 chr2 67635419 67635731 -183052123 + AluSx SINE Alu 1 311 -1 2656 245 73 7 chr2 67635731 67636040 -183051814 + L1MEc LINE L1 3054 3341 -2874 2260 117 7 0 chr2 67636040 67636349 -183051505 + AluSx SINE Alu 1 311 -1 2656 245 73 7 chr2 67636349 67636493 -183051361 + L1MEc LINE L1 3341 3670 -2545 327 246 0 0 chr2 67636572 67636641 -183051213 - MER96 DNA MER1_type? -105 70 2 674 124 0 0 chr2 67636643 67636740 -183051114 + L1ME LINE L1 5508 5604 -562 447 143 48 12 chr2 67636741 67636825 -183051029 + L1MCa LINE L1 168 254 -6310 * 2933 218 39 19 chr2 67636818 67637831 -183050023 + L1MCa LINE L1 562 1553 -5011 2376 107 0 0 chr2 67637831 67638139 -183049715 + AluSx SINE Alu 1 308 -4 2933 218 39 19 chr2 67638139 67638571 -183049283 + L1MCa LINE L1 1553 4122 -2442 1578 146 4 36 chr2 67638580 67638855 -183048999 - AluJb SINE Alu -1 311 46 263 211 0 0 chr2 67638874 67638926 -183048928 + L1MCa LINE L1 4369 4420 -2144 939 123 104 0 chr2 67638932 67639086 -183048768 + AluSx SINE Alu 3 172 -140 4549 106 16 25 chr2 67639094 67639774 -183048080 - LTR8 LTR ERV1 -9 682 9 985 131 0 0 chr2 67639776 67639913 -183047941 + AluSx SINE Alu 163 299 -13 5317 211 42 20 chr2 67639913 67641114 -183046740 + L1MCa LINE L1 4425 5661 -903 1306 190 57 25 chr2 67641114 67641393 -183046461 + AluJo SINE Alu 1 288 -24 5317 211 42 20 chr2 67641393 67641556 -183046298 + L1MCa LINE L1 5661 5819 -745 1563 117 41 15 chr2 67641602 67641868 -183045986 + L1MC/D LINE L1 5315 5587 -2408 1975 147 27 0 chr2 67642063 67642363 -183045491 - AluSx SINE Alu -4 308 1 532 223 58 0 chr2 67643062 67643165 -183044689 + FLAM_A SINE Alu 1 109 -33 1072 322 128 48 chr2 67643388 67644483 -183043371 - L2 LINE L2 -337 2977 1795 253 178 137 14 chr2 67644573 67644646 -183043208 + MER96 DNA MER1_type? 91 172 -3 354 127 0 0 chr2 67644653 67644724 -183043130 + (TA)n Simple_repeat Simple_repeat 2 72 0 225 0 0 0 chr2 67644729 67644754 -183043100 + (TG)n Simple_repeat Simple_repeat 2 26 0 241 315 97 46 chr2 67644763 67645001 -183042853 - L2 LINE L2 -1608 1706 1457 3338 114 64 12 chr2 67645192 67645693 -183042161 - MER1A DNA MER1_type 0 527 1 253 303 26 13 chr2 67645787 67645863 -183041991 + L2 LINE L2 3236 3312 -1 1899 155 0 34 chr2 67646146 67646537 -183041317 - AluSx SINE Alu 0 380 1 227 100 0 0 chr2 67646569 67646609 -183041245 - L1MA8 LINE L1 -5 6286 6247 2126 113 3 17 chr2 67647231 67647532 -183040322 - AluSx SINE Alu -13 299 3 240 275 150 25 chr2 67647547 67647667 -183040187 + L2 LINE L2 3179 3313 0 203 130 0 43 chr2 67647767 67647813 -183040041 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 195 382 91 27 chr2 67647821 67647931 -183039923 - L2 LINE L2 -35 3237 3121 320 345 180 19 chr2 67648160 67648522 -183039332 - L2 LINE L2 -429 2885 2466 2312 104 0 3 chr2 67649463 67649772 -183038082 - AluSg SINE Alu -2 308 1 286 315 27 0 chr2 67651059 67651132 -183036722 - MER5C DNA MER1_type -249 75 1 404 291 85 7 chr2 67651970 67652111 -183035743 + MIR SINE MIR 99 250 -12 21 57 0 0 chr2 67653272 67653307 -183034547 + AT_rich Low_complexity Low_complexity 1 35 0 254 362 10 71 chr2 67653736 67653932 -183033922 - L2 LINE L2 0 3313 3130 1233 183 0 129 chr2 67654720 67654919 -183032935 - AluSq SINE Alu -12 291 151 2312 97 3 0 chr2 67654919 67655228 -183032626 - AluSx SINE Alu -2 310 1 1233 183 0 129 chr2 67655228 67655362 -183032492 - AluSq SINE Alu -152 151 1 1237 161 0 10 chr2 67656259 67656452 -183031402 - AluJo SINE Alu -38 274 84 672 246 36 24 chr2 67656984 67657151 -183030703 + MER5B DNA MER1_type 4 172 -6 23 0 0 0 chr2 67657422 67657445 -183030409 + AT_rich Low_complexity Low_complexity 1 23 0 2557 60 0 0 chr2 67657505 67657806 -183030048 - AluY SINE Alu -10 301 1 410 234 103 48 chr2 67658185 67658330 -183029524 - MIR SINE MIR -11 251 99 2894 233 76 46 chr2 67659815 67660955 -183026899 - L1MC5 LINE L1 -176 7785 6611 248 296 76 23 chr2 67661025 67661197 -183026657 + L1MC4a LINE L1 6415 6595 -1213 213 121 0 0 chr2 67661245 67661278 -183026576 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 294 263 0 0 chr2 67661282 67661358 -183026496 - L1MC5 LINE L1 -1880 5928 5853 792 196 43 83 chr2 67661374 67661534 -183026320 + MER106A DNA MER1_type 1 151 -85 2159 137 0 3 chr2 67661534 67661840 -183026014 + AluSx SINE Alu 1 305 -7 792 196 43 83 chr2 67661840 67661909 -183025945 + MER106A DNA MER1_type 151 221 -15 609 296 80 11 chr2 67661915 67662179 -183025675 - L1MC5 LINE L1 -1958 5850 5569 30 59 0 0 chr2 67662523 67662574 -183025280 + AT_rich Low_complexity Low_complexity 1 51 0 280 193 88 0 chr2 67662897 67662954 -183024900 + L2 LINE L2 3252 3313 0 14935 125 90 5 chr2 67663104 67665605 -183022249 + Tigger2 DNA MER2_type 4 2718 0 1734 136 77 21 chr2 67666265 67666552 -183021302 + AluJo SINE Alu 1 303 -9 1774 164 27 7 chr2 67666841 67667140 -183020714 + AluJo SINE Alu 6 310 -2 642 274 70 40 chr2 67667800 67668173 -183019681 - L1ME4a LINE L1 -207 5914 5531 2442 229 36 5 chr2 67668479 67669059 -183018795 + L1ME3A LINE L1 5550 6147 -23 5537 93 31 4 chr2 67669420 67670215 -183017639 - L1PA13 LINE L1 -14 6149 5333 269 283 9 19 chr2 67670401 67670507 -183017347 - LTR33 LTR ERVL -20 501 397 264 293 0 24 chr2 67670709 67670791 -183017063 - LTR33 LTR ERVL -441 80 1 1951 157 0 22 chr2 67670935 67671254 -183016600 + AluJb SINE Alu 1 312 0 677 243 77 45 chr2 67671811 67672033 -183015821 - MIR SINE MIR -31 231 3 2190 104 14 0 chr2 67672914 67673211 -183014643 - AluSx SINE Alu -11 301 1 295 176 0 0 chr2 67673253 67673304 -183014550 - L1MC4 LINE L1 -373 7669 7619 1864 183 0 6 chr2 67673437 67673749 -183014105 + AluJb SINE Alu 1 310 -2 809 181 35 110 chr2 67674242 67674469 -183013385 - MER6B DNA MER2_type 0 210 1 676 233 107 58 chr2 67674719 67674908 -183012946 + L1ME4a LINE L1 5694 5872 -249 2231 104 10 0 chr2 67674908 67675196 -183012658 + AluSc SINE Alu 1 291 -18 676 233 107 58 chr2 67675196 67675409 -183012445 + L1ME4a LINE L1 5872 6118 -3 1934 140 0 0 chr2 67675567 67675845 -183012009 - AluSc SINE Alu -5 304 27 696 188 73 12 chr2 67676031 67676196 -183011658 - L1MB3 LINE L1 -2 6181 6007 2185 108 0 0 chr2 67676198 67676485 -183011369 + AluSq SINE Alu 1 287 -26 1141 201 5 0 chr2 67676507 67676696 -183011158 - MER21B LTR ERV1 -656 207 18 665 202 9 0 chr2 67676696 67676810 -183011044 + FLAM_C SINE Alu 1 115 -18 352 0 42 0 chr2 67676876 67676924 -183010930 + (CA)n Simple_repeat Simple_repeat 2 51 0 3807 172 29 37 chr2 67676925 67678241 -183009613 - L1MB3 LINE L1 -169 6002 4699 359 253 74 49 chr2 67678812 67678974 -183008880 - MLT1K LTR MaLR -41 547 382 237 284 148 0 chr2 67679136 67679217 -183008637 - MLT1K LTR MaLR -325 263 171 381 279 0 33 chr2 67679673 67679795 -183008059 - MLT1L LTR MaLR -4 611 494 708 308 135 14 chr2 67680134 67680572 -183007282 - L2 LINE L2 -16 3297 2807 23 54 0 0 chr2 67681384 67681421 -183006433 + AT_rich Low_complexity Low_complexity 1 37 0 536 323 54 16 chr2 67681479 67681665 -183006189 - MIR3 SINE MIR -7 201 9 1272 171 20 119 chr2 67681774 67682178 -183005676 - L1MC4 LINE L1 0 8042 7679 31134 87 9 9 chr2 67682296 67688442 -182999412 - L1PA7 LINE L1 -3 6151 11 298 251 60 33 chr2 67688616 67688846 -182999008 - MLT1J LTR MaLR -2 458 231 491 295 16 16 chr2 67688981 67689164 -182998690 - L1ME3A LINE L1 -14 6156 5974 1402 267 105 19 chr2 67689169 67690276 -182997578 - L1ME3A LINE L1 -210 5952 4749 674 128 110 0 chr2 67690306 67690415 -182997439 - FLAM_C SINE Alu -21 122 2 239 292 35 0 chr2 67690416 67690529 -182997325 - L1ME3A LINE L1 -1389 4757 4641 624 285 82 24 chr2 67690576 67690783 -182997071 - MLT1J LTR MaLR -292 219 1 1396 132 7 108 chr2 67691281 67691568 -182996286 - L1MB2 LINE L1 -298 5873 5616 2215 68 31 10 chr2 67691633 67691925 -182995929 - AluY SINE Alu -9 302 5 344 288 113 18 chr2 67692252 67692429 -182995425 + MIR3 SINE MIR 8 197 -65 230 279 198 18 chr2 67692803 67692914 -182994940 + L2 LINE L2 3183 3313 0 942 212 199 12 chr2 67693182 67693423 -182994431 + AluSx SINE Alu 5 290 -22 32 26 0 0 chr2 67694221 67694260 -182993594 + AT_rich Low_complexity Low_complexity 1 39 0 648 292 85 17 chr2 67695248 67695484 -182992370 - MIR SINE MIR -10 252 1 185 270 206 32 chr2 67696011 67696137 -182991717 - L2 LINE L2 -1384 1930 1783 1017 245 53 0 chr2 67696685 67696930 -182990924 - MIR SINE MIR -1 261 4 198 350 40 40 chr2 67697049 67697149 -182990705 - MIR SINE MIR -68 140 41 22 0 0 0 chr2 67697226 67697248 -182990606 + AT_rich Low_complexity Low_complexity 1 22 0 473 314 81 18 chr2 67697357 67697582 -182990272 - MIR SINE MIR -13 249 16 249 265 132 44 chr2 67698004 67698140 -182989714 - MLT1L LTR MaLR -52 563 416 343 236 127 0 chr2 67698183 67698293 -182989561 + MIR SINE MIR 139 262 0 333 241 123 65 chr2 67698459 67698629 -182989225 - MIR SINE MIR -49 213 34 2207 86 3 55 chr2 67699513 67699840 -182988014 - AluSp SINE Alu -3 310 1 611 239 67 0 chr2 67700112 67700246 -182987608 - MER96 DNA MER1_type? -32 143 1 850 224 58 29 chr2 67703093 67703298 -182984556 - Charlie1 DNA MER1_type -2537 224 14 633 159 8 32 chr2 67703659 67703785 -182984069 + FRAM SINE Alu 43 165 -11 501 296 34 15 chr2 67704033 67704300 -182983554 - L1MC5 LINE L1 -178 7783 7512 2354 91 0 10 chr2 67704665 67704974 -182982880 + AluSq SINE Alu 1 306 -7 2305 102 3 0 chr2 67704975 67705279 -182982575 + AluSg1 SINE Alu 1 305 -4 678 254 66 44 chr2 67705757 67705985 -182981869 + MIR SINE MIR 28 260 -2 8433 230 94 36 chr2 67706132 67707148 -182980706 - L1ME1 LINE L1 -5 6956 6001 2460 81 3 0 chr2 67707148 67707456 -182980398 - AluSp SINE Alu -4 309 1 8433 230 94 36 chr2 67707456 67707962 -182979892 - L1ME1 LINE L1 -960 6001 5526 747 231 82 5 chr2 67707962 67708157 -182979697 - MER63A DNA MER1_type 0 210 1 8433 230 94 36 chr2 67708157 67710228 -182977626 - L1ME1 LINE L1 -1435 5526 3058 2268 97 3 7 chr2 67710228 67710537 -182977317 - AluSx SINE Alu -4 308 1 8433 230 94 36 chr2 67710537 67711586 -182976268 - L1ME1 LINE L1 -3903 3058 2071 1995 206 22 38 chr2 67711633 67711662 -182976192 - L1ME1 LINE L1 -4945 1478 1450 376 48 48 0 chr2 67711662 67711724 -182976130 + (TTATG)n Simple_repeat Simple_repeat 2 66 0 1952 137 11 0 chr2 67711724 67712008 -182975846 - AluSx SINE Alu -25 287 1 1995 206 22 38 chr2 67712008 67712473 -182975381 - L1ME1 LINE L1 -4971 1452 991 2252 115 3 0 chr2 67712658 67712962 -182974892 - AluSq SINE Alu -8 305 1 1820 268 64 15 chr2 67713013 67713558 -182974296 - L1ME1 LINE L1 -5839 584 13 2230 111 3 0 chr2 67713636 67713943 -182973911 + AluSc SINE Alu 1 308 -1 1359 98 0 6 chr2 67714448 67714631 -182973223 - AluSq SINE Alu -3 310 129 442 256 242 56 chr2 67714690 67714905 -182972949 - MIR SINE MIR -2 260 6 186 258 177 0 chr2 67717506 67717568 -182970286 + MIR3 SINE MIR 82 154 -54 525 279 20 54 chr2 67717669 67717873 -182969981 + MIR SINE MIR 6 202 -60 319 274 60 67 chr2 67718208 67718493 -182969361 - L1MC4 LINE L1 -2 8040 7758 1170 148 6 0 chr2 67719041 67719223 -182968631 - L1MB5 LINE L1 -9 6165 5983 2276 93 7 0 chr2 67719233 67719522 -182968332 - AluSx SINE Alu -21 291 1 21 0 0 0 chr2 67719588 67719609 -182968245 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 67719649 67719677 -182968177 + AT_rich Low_complexity Low_complexity 1 28 0 484 262 177 41 chr2 67719911 67719980 -182967874 - L1ME3 LINE L1 -305 5857 5799 1901 149 7 3 chr2 67719980 67720276 -182967578 - AluJb SINE Alu -15 297 1 484 262 177 41 chr2 67720276 67720693 -182967161 - L1ME3 LINE L1 -363 5799 5305 180 321 75 0 chr2 67723863 67723916 -182963938 + L3 LINE CR1 97 153 -1424 1561 243 211 5 chr2 67725111 67725662 -182962192 + L2 LINE L2 1382 2045 -1269 3392 136 59 5 chr2 67725843 67726417 -182961437 + MER6A DNA MER2_type 1 605 0 902 257 121 50 chr2 67726418 67726757 -182961097 + L2 LINE L2 2941 3303 -10 524 280 35 0 chr2 67731568 67731711 -182956143 + MER117 DNA MER1_type 1 148 -49 302 211 203 23 chr2 67731741 67731869 -182955985 - L2 LINE L2 -4 3309 3159 1679 147 55 46 chr2 67731892 67732199 -182955655 + AluJb SINE Alu 1 310 -2 988 212 119 26 chr2 67732207 67732627 -182955227 + L1MC5 LINE L1 7452 7910 -51 2003 150 3 0 chr2 67732734 67733041 -182954813 - AluSq SINE Alu -5 308 1 575 282 17 107 chr2 67733045 67733251 -182954603 - L2 LINE L2 -239 3074 2909 762 183 15 0 chr2 67733251 67733382 -182954472 + FLAM_A SINE Alu 1 133 0 575 282 17 107 chr2 67733382 67733482 -182954372 - L2 LINE L2 -404 2909 2802 516 268 68 27 chr2 67733526 67733746 -182954108 + MARNA DNA Mariner 76 304 -282 476 151 32 0 chr2 67734387 67734480 -182953374 + L1PB4 LINE L1 5932 6027 -129 495 136 0 0 chr2 67734483 67734564 -182953290 + L1PB4 LINE L1 6071 6151 -5 4247 164 32 15 chr2 67734572 67735322 -182952532 - MER6 DNA MER2_type -102 763 1 222 331 56 12 chr2 67735472 67735612 -182952242 + L2 LINE L2 3078 3308 -5 616 310 35 13 chr2 67735973 67736205 -182951649 + MIR SINE MIR 26 262 0 * 763 234 87 14 chr2 67736198 67736416 -182951438 - MIR SINE MIR 0 262 29 809 104 8 40 chr2 67736494 67736619 -182951235 + FLAM_C SINE Alu 6 126 -17 837 246 11 13 chr2 67738841 67739045 -182948809 + MIR SINE MIR 51 254 -8 930 148 124 18 chr2 67740978 67741147 -182946707 - MER5A DNA MER1_type 0 189 3 1073 149 8 111 chr2 67741435 67741697 -182946157 - MER106A DNA MER1_type 0 236 2 254 315 81 54 chr2 67743000 67743149 -182944705 - MIR3 SINE MIR -22 186 34 1110 94 11 11 chr2 67743166 67743346 -182944508 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1143 148 0 45 chr2 67743352 67743554 -182944300 - AluJo SINE Alu -33 279 87 2474 82 3 0 chr2 67744911 67745215 -182942639 - AluSp SINE Alu -8 305 1 454 260 247 20 chr2 67745630 67745780 -182942074 + MLT1J2 LTR MaLR 201 384 -66 827 276 64 35 chr2 67745857 67746169 -182941685 + MLT1I LTR MaLR 72 392 -17 1342 148 5 14 chr2 67746371 67746581 -182941273 + AluJb SINE Alu 82 289 -23 24 0 0 0 chr2 67747181 67747205 -182940649 + AT_rich Low_complexity Low_complexity 1 24 0 1765 125 9 87 chr2 67748047 67748368 -182939486 + AluSx SINE Alu 2 297 -15 384 331 55 31 chr2 67749028 67749318 -182938536 + MARNA DNA Mariner 47 343 -243 576 293 30 0 chr2 67749338 67749471 -182938383 - L2 LINE L2 0 3272 3136 227 273 0 0 chr2 67749628 67749683 -182938171 + MARNA DNA Mariner 333 387 -199 2280 61 7 0 chr2 67749743 67750023 -182937831 - AluY SINE Alu -29 282 1 210 270 40 70 chr2 67750084 67750184 -182937670 - MIR3 SINE MIR -106 102 6 1995 137 17 3 chr2 67750617 67750910 -182936944 + AluSx SINE Alu 1 297 -15 402 246 42 25 chr2 67751709 67751827 -182936027 - MIR SINE MIR -44 218 99 2079 128 0 7 chr2 67752040 67752338 -182935516 - AluSx SINE Alu -15 297 2 837 157 0 0 chr2 67752338 67752459 -182935395 - AluSg/x SINE Alu -55 255 135 1838 132 0 107 chr2 67752486 67752812 -182935042 + AluSx SINE Alu 1 291 -11 421 299 60 0 chr2 67753421 67753538 -182934316 - L2 LINE L2 -1 3312 3189 621 214 32 0 chr2 67753549 67753675 -182934179 - MER94 DNA DNA -4 130 1 373 322 73 49 chr2 67756578 67756823 -182931031 - MIR SINE MIR -7 255 5 202 244 101 156 chr2 67757624 67757794 -182930060 - MIR SINE MIR -2 260 104 2494 42 0 0 chr2 67757794 67758106 -182929748 + AluY SINE Alu 1 312 0 202 244 101 156 chr2 67758106 67758172 -182929682 - MIR SINE MIR -158 104 36 904 189 34 23 chr2 67758991 67759297 -182928557 - MSTD LTR MaLR 0 396 1 1901 140 4 0 chr2 67759639 67759942 -182927912 - AluSx SINE Alu 0 306 3 2151 123 7 10 chr2 67761361 67761845 -182926009 - AluSx SINE Alu 0 312 1 573 266 6 34 chr2 67762089 67762266 -182925588 + L2 LINE L2 1738 1909 -1405 951 180 0 0 chr2 67762267 67762439 -182925415 - AluSg/x SINE Alu -13 299 128 1322 139 68 16 chr2 67813408 67813659 -182874195 + L1MD3 LINE L1 7730 7993 -2 6845 78 11 8 chr2 67813957 67815374 -182872480 - L1PA12 LINE L1 -15 6153 4744 633 141 14 14 chr2 67815475 67815617 -182872237 + (CCA)n Simple_repeat Simple_repeat 1 142 0 219 69 0 0 chr2 67815648 67815677 -182872177 + (CCA)n Simple_repeat Simple_repeat 2 30 0 914 264 4 58 chr2 67815709 67815967 -182871887 - MIR SINE MIR -7 255 12 255 301 102 28 chr2 67816016 67816192 -182871662 + MLT1J LTR MaLR 180 368 -143 760 187 8 15 chr2 67816860 67816994 -182870860 - FLAM_C SINE Alu 0 133 1 350 263 98 8 chr2 67817167 67817300 -182870554 + MIR SINE MIR 91 235 -27 1366 216 43 41 chr2 67817449 67817667 -182870187 + L1ME3A LINE L1 5764 5985 -185 2250 103 0 3 chr2 67817667 67817967 -182869887 + AluSg SINE Alu 1 299 -11 1366 216 43 41 chr2 67817967 67818141 -182869713 + L1ME3A LINE L1 5985 6157 -13 381 273 0 27 chr2 67819013 67819123 -182868731 - MLT1K LTR MaLR -303 285 179 298 219 0 0 chr2 67819348 67819412 -182868442 + MIR SINE MIR 91 154 -108 653 289 83 46 chr2 67819827 67820177 -182867677 + MLT1K LTR MaLR 144 506 -82 230 206 120 43 chr2 67820204 67820296 -182867558 + MLT1K LTR MaLR 490 588 0 946 264 29 24 chr2 67820678 67820938 -182866916 - MIR SINE MIR 0 262 1 568 262 59 37 chr2 67821732 67821919 -182865935 + MIR SINE MIR 2 192 -70 450 288 57 44 chr2 67822597 67822826 -182865028 - L1MEd LINE L1 -5541 578 347 320 145 53 26 chr2 67822859 67822935 -182864919 + HsTC2 DNA Tc2 1814 1891 -7 203 250 194 25 chr2 67822943 67823103 -182864751 + L2 LINE L2 2694 2880 -434 252 130 22 0 chr2 67823597 67823643 -182864211 - L1MD3 LINE L1 -11 7984 7938 2062 127 0 38 chr2 67823670 67823985 -182863869 - AluSx SINE Alu -8 304 2 2110 99 0 24 chr2 67824552 67824874 -182862980 - AluSq SINE Alu 0 315 1 1603 112 0 101 chr2 67825129 67825396 -182862458 + AluSx SINE Alu 50 289 -23 697 203 114 30 chr2 67825731 67825757 -182862097 + L1MC4 LINE L1 6450 6472 -1570 3295 107 17 4 chr2 67825757 67826216 -182861638 + MER4C LTR ERV1 1 465 0 697 203 114 30 chr2 67826216 67826391 -182861463 + L1MC4 LINE L1 6472 6668 -1374 7788 229 66 19 chr2 67826400 67827736 -182860118 - L1ME LINE L1 -351 5813 4542 1527 220 0 7 chr2 67827736 67828036 -182859818 + AluJo SINE Alu 5 302 -10 7788 229 66 19 chr2 67828036 67828396 -182859458 - L1ME LINE L1 -1622 4542 4201 2173 106 0 0 chr2 67828396 67828705 -182859149 - AluSx SINE Alu 0 310 2 7788 229 66 19 chr2 67828705 67829928 -182857926 - L1ME LINE L1 -1963 4201 2750 493 147 17 35 chr2 67832228 67832344 -182855510 + MER113 DNA MER1_type? 30 143 -378 719 205 48 6 chr2 67832349 67832515 -182855339 - L1M4 LINE L1 -1109 5037 4865 231 281 0 0 chr2 67833024 67833088 -182854766 + (CATATA)n Simple_repeat Simple_repeat 4 67 0 452 250 9 9 chr2 67833224 67833340 -182854514 + MER117 DNA MER1_type 30 145 -52 1091 333 118 11 chr2 67833385 67834012 -182853842 - L3 LINE CR1 -46 1531 838 488 261 94 7 chr2 67834076 67834214 -182853640 - MIR SINE MIR -93 169 20 2692 122 70 2 chr2 67834222 67834623 -182853231 + MSTA LTR MaLR 1 428 0 416 327 94 6 chr2 67834775 67834934 -182852920 - L3 LINE CR1 -1199 378 206 621 279 41 18 chr2 67836594 67836749 -182851105 + MIR SINE MIR 37 200 -62 1962 148 74 6 chr2 67836749 67837073 -182850781 - MER7A DNA MER2_type 0 346 3 621 279 41 18 chr2 67837073 67837136 -182850718 + MIR SINE MIR 200 260 -2 235 369 0 0 chr2 67837311 67837422 -182850432 + (CGGAG)n Simple_repeat Simple_repeat 5 115 0 266 230 185 62 chr2 67837923 67838299 -182849555 + MLT1I LTR MaLR 15 402 -7 339 299 164 37 chr2 67838439 67838763 -182849091 - L2 LINE L2 -862 2452 2088 448 69 35 0 chr2 67839303 67839361 -182848493 + AluSg/x SINE Alu 213 272 -37 1966 266 73 9 chr2 67839364 67839680 -182848174 - L2 LINE L2 -682 2632 2338 2443 83 3 0 chr2 67839680 67839981 -182847873 + AluSx SINE Alu 4 305 -7 1966 266 73 9 chr2 67839981 67840352 -182847502 - L2 LINE L2 -976 2338 1901 1761 122 0 93 chr2 67840352 67840692 -182847162 + AluSx SINE Alu 1 311 0 192 77 0 0 chr2 67841139 67841165 -182846689 + (GA)n Simple_repeat Simple_repeat 2 27 0 561 306 77 5 chr2 67841426 67841635 -182846219 - MIR SINE MIR -19 243 20 233 163 0 0 chr2 67842035 67842078 -182845776 - L2 LINE L2 0 3272 3230 2444 84 7 0 chr2 67842212 67842521 -182845333 - AluSp SINE Alu -2 311 1 2236 84 17 0 chr2 67843819 67844106 -182843748 + AluSx SINE Alu 1 292 -20 2280 112 0 0 chr2 67844106 67844402 -182843452 + AluSx SINE Alu 7 302 -10 2295 102 0 0 chr2 67844500 67844793 -182843061 - AluY SINE Alu -18 293 1 2187 123 0 0 chr2 67845716 67846009 -182841845 - AluSg SINE Alu -17 293 1 5335 145 7 28 chr2 67846320 67847235 -182840619 - L1P LINE L1 -1475 4671 3777 195 42 0 0 chr2 67847806 67847830 -182840024 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 346 172 293 0 chr2 67849104 67849203 -182838651 - Zaphod DNA AcHobo 0 4031 3904 1323 223 192 9 chr2 67849205 67849632 -182838222 - Zaphod DNA AcHobo -3523 508 4 1778 174 61 3 chr2 67850304 67850649 -182837205 - MER47A DNA MER2_type 0 366 2 461 250 62 58 chr2 67851252 67851512 -182836342 - MIR SINE MIR 0 262 2 1338 263 38 12 chr2 67852001 67852343 -182835511 - MER87 LTR ERV1 -23 518 168 4444 83 16 15 chr2 67852953 67853565 -182834289 + L1PA11 LINE L1 5562 6174 0 476 262 93 16 chr2 67853596 67853779 -182834075 + MIR SINE MIR 66 262 0 230 309 59 65 chr2 67854655 67854778 -182833076 + MIR SINE MIR 23 143 -67 231 250 33 0 chr2 67854785 67854845 -182833009 - L2 LINE L2 -1 3312 3251 1725 224 98 11 chr2 67854877 67855541 -182832313 - L2 LINE L2 -227 3086 2358 358 271 127 30 chr2 67856928 67857164 -182830690 - MER97c DNA MER1_type? -16 1074 816 3393 52 0 70 chr2 67857195 67857677 -182830177 + LTR7 LTR ERV1 1 448 -2 20983 92 12 7 chr2 67857679 67860653 -182827201 + HERVH LTR ERV1 1 2987 -4726 892 138 7 0 chr2 67860647 67860792 -182827062 + HERVH LTR ERV1 3140 3285 -4428 * 660 148 0 0 chr2 67860791 67860892 -182826962 + HERVH LTR ERV1 3544 3644 -4069 * 2555 165 7 0 chr2 67860891 67861298 -182826556 + HERVH LTR ERV1 4740 5149 -2564 1253 127 52 14 chr2 67861299 67861316 -182826538 + HERVH LTR ERV1 5600 5615 -2098 252 0 0 0 chr2 67861316 67861344 -182826510 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1253 127 52 14 chr2 67861344 67861538 -182826316 + HERVH LTR ERV1 5615 5819 -1894 * 2563 79 48 13 chr2 67861536 67861915 -182825939 + HERVH LTR ERV1 7322 7713 0 3739 38 0 4 chr2 67861915 67862365 -182825489 + LTR7 LTR ERV1 1 448 -2 1526 186 46 31 chr2 67862630 67863189 -182824665 - MER97b DNA MER1_type? -448 605 1 1817 175 0 0 chr2 67864932 67865223 -182822631 - AluJb SINE Alu -19 293 3 359 236 27 18 chr2 67865315 67865425 -182822429 + MIR3 SINE MIR 92 202 -6 215 331 40 34 chr2 67867959 67868108 -182819746 + MIR SINE MIR 40 188 -62 918 241 5 5 chr2 67868885 67869084 -182818770 - MER58A DNA MER1_type 0 224 26 3696 195 12 6 chr2 67870656 67871303 -182816551 + MER82 DNA MER2_type 2 652 -1 1813 192 12 6 chr2 67871318 67871652 -182816202 - MLT2C1 LTR ERVL -61 336 1 367 234 128 0 chr2 67872179 67872273 -182815581 + MER5A DNA MER1_type 4 109 -80 227 326 118 30 chr2 67873626 67873761 -182814093 + L2 LINE L2 2957 3103 -210 227 320 176 8 chr2 67873788 67873913 -182813941 + L2 LINE L2 3168 3313 0 2564 144 14 23 chr2 67874452 67874890 -182812964 + Tigger2a DNA MER2_type 1 434 0 2004 159 79 6 chr2 67875817 67876157 -182811697 + MLT1A1 LTR MaLR 1 365 0 2390 97 0 0 chr2 67876390 67876688 -182811166 + AluSc SINE Alu 1 298 -11 2294 102 0 7 chr2 67877225 67877529 -182810325 - AluSx SINE Alu -10 302 1 198 0 0 0 chr2 67878062 67878084 -182809770 + (TC)n Simple_repeat Simple_repeat 1 22 0 380 231 13 0 chr2 67879190 67879268 -182808586 + MER117 DNA MER1_type 11 89 -108 222 237 0 0 chr2 67879543 67879619 -182808235 + (TA)n Simple_repeat Simple_repeat 2 77 0 387 110 0 25 chr2 67880030 67880104 -182807750 - AluSq/x SINE Alu -154 149 93 67 55 0 0 chr2 67880110 67880219 -182807635 + AT_rich Low_complexity Low_complexity 1 109 0 1710 137 84 58 chr2 67880232 67880576 -182807278 - MLT1A2 LTR MaLR -21 353 1 2044 129 0 14 chr2 67881023 67881317 -182806537 - AluSx SINE Alu -22 290 1 1076 70 29 6 chr2 67882661 67882693 -182805161 + (TTTC)n Simple_repeat Simple_repeat 1 207 0 1076 70 29 6 chr2 67882693 67882864 -182804990 + (TTTC)n Simple_repeat Simple_repeat 1 175 0 298 109 79 0 chr2 67884439 67884540 -182803314 + (TA)n Simple_repeat Simple_repeat 1 109 0 26 50 0 0 chr2 67884606 67884646 -182803208 + AT_rich Low_complexity Low_complexity 1 40 0 2191 131 30 30 chr2 67884646 67885019 -182802835 - MLT2D LTR ERVL -41 373 1 22 0 0 0 chr2 67885504 67885526 -182802328 + AT_rich Low_complexity Low_complexity 1 22 0 1251 216 45 30 chr2 67886037 67886371 -182801483 - MER2 DNA MER2_type -5 340 2 22 0 0 0 chr2 67887045 67887067 -182800787 + AT_rich Low_complexity Low_complexity 1 22 0 870 325 105 22 chr2 67887941 67888571 -182799283 - L2 LINE L2 -407 2907 2226 196 236 115 68 chr2 67888649 67888797 -182799057 + L2 LINE L2 2995 3149 -164 617 325 81 22 chr2 67888883 67889339 -182798515 - L2 LINE L2 -1123 2191 1709 475 207 152 55 chr2 67890419 67890583 -182797271 - MER5A DNA MER1_type 0 189 10 435 259 7 52 chr2 67890774 67890909 -182796945 - MER5A DNA MER1_type -5 184 56 646 116 0 0 chr2 67890914 67891000 -182796854 - AluSg/x SINE Alu -31 281 196 190 247 27 27 chr2 67891000 67891073 -182796781 - MER5A DNA MER1_type -115 74 2 1744 160 14 0 chr2 67891483 67891777 -182796077 - L1PA16 LINE L1 -9 6157 5860 969 180 100 26 chr2 67892391 67892688 -182795166 - LTR37B LTR ERV1 -20 448 94 299 220 284 21 chr2 67893818 67893959 -182793895 - MER5A DNA MER1_type -3 186 9 891 190 11 17 chr2 67893977 67894156 -182793698 + MER5B DNA MER1_type 1 178 0 215 306 41 10 chr2 67894164 67894262 -182793592 - MER5B DNA MER1_type 0 178 78 396 103 0 0 chr2 67894303 67894361 -182793493 + (CA)n Simple_repeat Simple_repeat 1 58 0 308 183 110 37 chr2 67894408 67894490 -182793364 + MER5B DNA MER1_type 91 178 0 468 294 56 6 chr2 67894873 67895053 -182792801 - L2 LINE L2 -9 3304 3116 2187 102 10 3 chr2 67895281 67895574 -182792280 + AluSg1 SINE Alu 1 295 -14 441 302 23 23 chr2 67896759 67896931 -182790923 + MIR3 SINE MIR 34 205 -3 1095 154 0 0 chr2 67897001 67897163 -182790691 + AluJb SINE Alu 137 298 -14 288 238 0 16 chr2 67897324 67897387 -182790467 + MLT1K LTR MaLR 188 249 -339 879 304 70 44 chr2 67897412 67897819 -182790035 + MLT1K LTR MaLR 97 519 -69 2383 104 0 0 chr2 67897819 67898126 -182789728 - AluSx SINE Alu -5 307 1 879 304 70 44 chr2 67898126 67898192 -182789662 + MLT1K LTR MaLR 519 582 -6 2017 136 33 0 chr2 67898431 67898780 -182789074 - AluSx SINE Alu 0 359 1 1169 135 0 0 chr2 67899091 67899261 -182788593 + FRAM SINE Alu 1 167 -9 196 229 0 0 chr2 67899549 67899597 -182788257 - L2 LINE L2 -3 3310 3263 398 229 39 72 chr2 67899697 67899850 -182788004 + L2 LINE L2 3162 3309 -4 493 264 24 0 chr2 67900277 67900402 -182787452 + MER91A DNA MER1_type 2 129 -67 414 234 27 12 chr2 67901472 67901620 -182786234 + MIR SINE MIR 6 150 -62 281 268 21 42 chr2 67903819 67903961 -182783893 + L1MEd LINE L1 40 178 -5941 933 281 69 42 chr2 67904078 67904987 -182782867 + L1M4 LINE L1 4458 5391 -755 541 293 101 75 chr2 67905000 67905375 -182782479 + MLT1I LTR MaLR 7 391 -18 602 210 77 35 chr2 67905394 67905537 -182782317 + MER5B DNA MER1_type 27 175 -3 2139 201 102 36 chr2 67905559 67906197 -182781657 + HAL1 LINE L1 1022 1701 -806 1088 119 49 0 chr2 67906182 67906367 -182781487 + L1MA8 LINE L1 6057 6250 -41 * 250 153 136 0 chr2 67906422 67906481 -182781373 - L1MA1 LINE L1 -27 6275 6209 * 388 111 0 14 chr2 67906458 67906530 -182781324 + L1MA9 LINE L1 6229 6291 0 501 270 232 7 chr2 67906540 67906833 -182781021 + HAL1 LINE L1 1690 2048 -459 1145 120 0 6 chr2 67906855 67907038 -182780816 - L1MA6 LINE L1 0 6300 6119 2201 165 6 0 chr2 67907043 67907383 -182780471 - MER7A DNA MER2_type -6 340 1 558 146 21 10 chr2 67907388 67907484 -182780370 - L1MA6 LINE L1 -178 6122 6026 12618 144 25 14 chr2 67907485 67909497 -182778357 - Ricksha_c DNA DNA 0 2046 13 4391 145 13 25 chr2 67909509 67910486 -182777368 - L1MA7 LINE L1 -266 6025 5059 716 236 53 85 chr2 67910491 67910868 -182776986 + HAL1 LINE L1 2036 2400 -107 578 265 60 51 chr2 67911322 67911537 -182776317 - MIR SINE MIR -44 218 2 186 43 0 0 chr2 67911546 67911569 -182776285 + (CA)n Simple_repeat Simple_repeat 2 24 0 424 301 214 7 chr2 67912720 67912996 -182774858 + L2 LINE L2 1720 2052 -1262 333 263 35 9 chr2 67913057 67913171 -182774683 + L2 LINE L2 3155 3271 -1 2240 105 3 3 chr2 67913479 67913775 -182774079 - AluSx SINE Alu -16 296 1 2475 77 0 0 chr2 67914281 67914578 -182773276 + AluSc SINE Alu 4 300 -9 582 252 133 21 chr2 67919146 67919380 -182768474 + MIR SINE MIR 3 262 0 1002 257 109 40 chr2 67920696 67921124 -182766730 - MLT1J LTR MaLR 0 511 45 1058 186 50 0 chr2 67921124 67921323 -182766531 - MER3 DNA MER1_type 0 209 1 1002 257 109 40 chr2 67921323 67921372 -182766482 - MLT1J LTR MaLR -466 45 1 183 237 17 34 chr2 67921507 67921566 -182766288 + MIR SINE MIR 199 256 -6 635 194 131 25 chr2 67923063 67923223 -182764631 - MER5B DNA MER1_type 0 178 2 1175 215 158 36 chr2 67923843 67923989 -182763865 - LTR16C LTR ERVL 0 491 364 2167 117 3 17 chr2 67923989 67924287 -182763567 + AluSx SINE Alu 1 294 -18 1175 215 158 36 chr2 67924287 67924578 -182763276 - LTR16C LTR ERVL -127 364 1 210 143 0 0 chr2 67924586 67924621 -182763233 + (TCCA)n Simple_repeat Simple_repeat 3 37 0 1472 199 97 30 chr2 67925164 67925535 -182762319 + MSTD LTR MaLR 1 396 0 228 247 25 62 chr2 67927387 67927468 -182760386 + MIR SINE MIR 117 194 -68 211 271 0 0 chr2 67928487 67928546 -182759308 - MIR SINE MIR -109 153 95 530 264 59 67 chr2 67928562 67928801 -182759053 + MIR SINE MIR 18 254 -8 394 286 24 16 chr2 67929139 67929265 -182758589 - L2 LINE L2 0 3272 3146 236 333 46 0 chr2 67929970 67930057 -182757797 + MIR SINE MIR 156 246 -16 366 141 16 0 chr2 67931197 67931261 -182756593 + MER5A DNA MER1_type 11 75 -114 2017 88 4 4 chr2 67931262 67931524 -182756330 + AluSc SINE Alu 1 262 -47 296 275 12 0 chr2 67931651 67931731 -182756123 - L2 LINE L2 0 3313 3233 246 220 0 0 chr2 67932146 67932196 -182755658 + GA-rich Low_complexity Low_complexity 1 50 0 379 304 58 7 chr2 67933896 67934034 -182753820 - MIR SINE MIR -62 146 20 256 339 25 25 chr2 67934669 67934787 -182753067 + MIR SINE MIR 8 125 -137 1044 176 35 10 chr2 67936462 67936661 -182751193 + MLT1A1 LTR MaLR 162 365 0 4619 110 8 76 chr2 67937571 67938292 -182749562 - MER4E LTR ERV1 0 766 105 2311 102 3 0 chr2 67938292 67938595 -182749259 + AluSx SINE Alu 7 310 -2 4619 110 8 76 chr2 67938595 67938693 -182749161 - MER4E LTR ERV1 -661 105 2 2112 138 80 5 chr2 67938968 67939344 -182748510 - L1MB3 LINE L1 -2 6181 5778 23 0 0 0 chr2 67939355 67939378 -182748476 + AT_rich Low_complexity Low_complexity 1 23 0 282 317 21 14 chr2 67939529 67939671 -182748183 - L1MC4a LINE L1 -1887 5921 5779 1540 202 21 3 chr2 67939678 67940005 -182747849 - MER58B DNA MER1_type -7 334 2 1393 262 94 53 chr2 67940008 67941005 -182746849 - L1MC4a LINE L1 -744 5402 4735 868 128 80 146 chr2 67941024 67941250 -182746604 - MER20 DNA MER1_type 0 219 9 317 299 221 37 chr2 67941296 67941412 -182746442 + L2 LINE L2 2920 3013 -259 2482 118 13 11 chr2 67941412 67941786 -182746068 - THE1C LTR MaLR 0 375 1 317 299 221 37 chr2 67941786 67941967 -182745887 + L2 LINE L2 3013 3272 0 215 200 0 0 chr2 67942102 67942137 -182745717 - MIR SINE MIR -8 254 220 200 311 0 0 chr2 67942104 67942149 -182745705 - L2 LINE L2 -16 3256 3212 * 624 260 199 5 chr2 67942290 67942486 -182745368 + MIR SINE MIR 17 250 -12 809 129 0 45 chr2 67942903 67943035 -182744819 + FLAM_C SINE Alu 2 127 -16 214 248 40 88 chr2 67943782 67943907 -182743947 + L2 LINE L2 2569 2687 -627 423 189 11 33 chr2 67944104 67944194 -182743660 + MER103 DNA DNA 14 101 -65 331 217 72 24 chr2 67944493 67944576 -182743278 - L2 LINE L2 0 3313 3227 186 292 146 0 chr2 67944755 67944803 -182743051 - L2 LINE L2 0 3272 3218 899 262 106 97 chr2 67944820 67945553 -182742301 - L2 LINE L2 -541 2773 2034 287 279 157 50 chr2 67945730 67945992 -182741862 + L2 LINE L2 2621 2910 -404 502 226 67 102 chr2 67946014 67946297 -182741557 + LTR33A LTR ERVL 8 280 -243 561 119 0 24 chr2 67946354 67946438 -182741416 + MLT1C LTR MaLR 1 82 -385 336 311 132 67 chr2 67946583 67946901 -182740953 + L2 LINE L2 2909 3252 -20 1940 169 30 0 chr2 67946901 67947238 -182740616 - MER7A DNA MER2_type 0 346 2 336 311 132 67 chr2 67947238 67947260 -182740594 + L2 LINE L2 3252 3271 -1 575 212 223 26 chr2 67947297 67947490 -182740364 - MIR SINE MIR -30 232 2 484 271 38 0 chr2 67947725 67947858 -182739996 + LTR33 LTR ERVL 383 520 -1 1893 136 0 35 chr2 67948121 67948431 -182739423 + AluSx SINE Alu 1 299 -13 521 237 76 47 chr2 67948760 67948971 -182738883 + MLT1K LTR MaLR 370 586 -2 684 237 130 85 chr2 67949119 67949630 -182738224 + LTR33A LTR ERVL 9 523 0 215 224 20 0 chr2 67950107 67950156 -182737698 - L2 LINE L2 0 3313 3264 587 175 0 10 chr2 67950722 67950819 -182737035 - Tigger7 DNA MER2_type -5 2482 2387 1228 212 18 55 chr2 67950820 67951094 -182736760 - Tigger7 DNA MER2_type -2223 264 1 338 227 47 99 chr2 67951094 67951266 -182736588 + L1ME4a LINE L1 5782 5944 -177 242 160 20 0 chr2 67951810 67951860 -182735994 + (TG)n Simple_repeat Simple_repeat 2 52 0 462 287 71 51 chr2 67952242 67952481 -182735373 - MIR SINE MIR -4 258 4 948 109 63 6 chr2 67953613 67953788 -182734066 - MER96B DNA MER1_type? -43 374 190 21 71 0 0 chr2 67953945 67953987 -182733867 + AT_rich Low_complexity Low_complexity 1 42 0 1522 156 64 28 chr2 67954095 67954377 -182733477 + AluJb SINE Alu 1 292 -20 19326 137 25 13 chr2 67954908 67957839 -182730015 + L1M1 LINE L1 13 2985 -4580 2308 57 40 0 chr2 67957839 67958136 -182729718 + AluY SINE Alu 1 309 -2 19326 137 25 13 chr2 67958136 67958227 -182729627 + L1M1 LINE L1 2985 3073 -4492 1742 102 29 0 chr2 67958231 67958506 -182729348 + L1MA2 LINE L1 6022 6304 0 524 305 210 24 chr2 67960769 67961493 -182726361 + L2 LINE L2 1493 2351 -963 324 0 0 0 chr2 67961594 67961630 -182726224 + (TG)n Simple_repeat Simple_repeat 1 36 0 830 225 17 12 chr2 67962218 67962391 -182725463 - MER5B DNA MER1_type 0 178 5 357 287 165 0 chr2 67962537 67962652 -182725202 + L2 LINE L2 3139 3272 0 231 204 0 0 chr2 67963617 67963661 -182724193 + (TG)n Simple_repeat Simple_repeat 2 45 0 721 281 72 0 chr2 67964771 67965006 -182722848 - MIR SINE MIR 0 262 11 669 250 125 19 chr2 67965559 67965823 -182722031 + LTR16A1 LTR ERVL 162 453 -4 246 62 0 0 chr2 67966581 67966613 -182721241 + (CA)n Simple_repeat Simple_repeat 2 33 0 587 319 6 32 chr2 67967346 67967503 -182720351 + MER91A DNA MER1_type 1 153 -43 1780 216 96 21 chr2 67968639 67969400 -182718454 + L1MC4 LINE L1 6772 7758 -284 1969 138 131 16 chr2 67969400 67969783 -182718071 - MSTA LTR MaLR 0 428 2 1780 216 96 21 chr2 67969783 67969902 -182717952 + L1MC4 LINE L1 7758 7867 -175 304 180 225 34 chr2 67970186 67970275 -182717579 + L2 LINE L2 3208 3313 0 452 289 93 63 chr2 67970479 67970877 -182716977 - MLT1J LTR MaLR -2 509 100 662 328 153 10 chr2 67970962 67971368 -182716486 + L3 LINE CR1 1102 1565 -12 2135 102 24 0 chr2 67972988 67973283 -182714571 - AluSx SINE Alu -10 302 1 1443 182 128 30 chr2 67974851 67975257 -182712597 - L1ME2 LINE L1 0 6164 5719 1775 134 34 3 chr2 67975259 67975550 -182712304 - AluSx SINE Alu -12 300 1 21 0 0 0 chr2 67976699 67976720 -182711134 + AT_rich Low_complexity Low_complexity 1 21 0 458 234 195 0 chr2 67976911 67977039 -182710815 - L2 LINE L2 -1 3312 3160 1163 127 81 5 chr2 67977058 67977255 -182710599 + AluSq SINE Alu 100 311 -2 1337 226 45 166 chr2 67977272 67977815 -182710039 - L2 LINE L2 -199 3114 2608 421 222 34 34 chr2 67977815 67977932 -182709922 - MER104 DNA Tc2 -59 121 5 1337 226 45 166 chr2 67977932 67978299 -182709555 - L2 LINE L2 -705 2608 2198 739 315 56 25 chr2 67978448 67978804 -182709050 - LTR16C LTR ERVL 0 491 125 231 290 210 27 chr2 67980631 67980817 -182707037 - L3 LINE CR1 -27 1550 1331 304 383 114 0 chr2 67981350 67981499 -182706355 + L2 LINE L2 3102 3267 -5 2119 96 7 10 chr2 67981772 67982073 -182705781 + AluSx SINE Alu 1 300 -12 343 256 96 56 chr2 67982451 67982576 -182705278 - MIR3 SINE MIR -45 163 34 281 342 105 38 chr2 67983407 67983778 -182704076 + L2 LINE L2 2827 3222 -50 438 214 68 10 chr2 67984100 67984203 -182703651 + MIR SINE MIR 79 187 -75 2033 95 0 49 chr2 67984381 67984685 -182703169 - AluSx SINE Alu -1 311 23 389 254 65 23 chr2 67984819 67985029 -182702825 + MLT1I LTR MaLR 2 187 -222 2648 130 59 9 chr2 67985030 67985469 -182702385 + L1MB3 LINE L1 5722 6182 -1 342 123 0 0 chr2 67985473 67985530 -182702324 + (GGA)n Simple_repeat Simple_repeat 2 58 0 607 273 54 25 chr2 67985536 67985758 -182702096 + MLT1J2 LTR MaLR 206 443 -7 225 0 0 0 chr2 67988458 67988483 -182699371 + (TG)n Simple_repeat Simple_repeat 2 26 0 1125 179 42 121 chr2 67988677 67989196 -182698658 - Charlie2 DNA MER1_type 0 2862 2385 252 286 61 0 chr2 67989228 67989326 -182698528 - Charlie2 DNA MER1_type -902 1960 1857 2580 131 177 55 chr2 67989754 67990303 -182697551 - LTR35 LTR ERV1 -2 616 1 224 266 83 83 chr2 67991382 67991404 -182696450 - L2 LINE L2 0 3313 3292 1731 164 29 146 chr2 67991404 67991798 -182696056 + MER66B LTR ERV1 1 373 -113 414 77 0 0 chr2 67991798 67991850 -182696004 + Alu SINE Alu 229 320 0 279 50 25 0 chr2 67991850 67991890 -182695964 + (TAA)n Simple_repeat Simple_repeat 2 180 0 1731 164 29 146 chr2 67991890 67991993 -182695861 + MER66B LTR ERV1 373 486 0 224 266 83 83 chr2 67991993 67992079 -182695775 - L2 LINE L2 -20 3293 3205 242 341 52 0 chr2 67992684 67992810 -182695044 - L2 LINE L2 -4 3268 3132 724 131 66 5 chr2 67993570 67994483 -182693371 + L1MA4A LINE L1 5107 6280 -23 2529 107 22 0 chr2 67995111 67995467 -182692387 + THE1B LTR MaLR 1 364 0 297 0 0 0 chr2 67996294 67996327 -182691527 + (CA)n Simple_repeat Simple_repeat 2 34 0 189 0 0 0 chr2 67996326 67996347 -182691507 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 1097 304 51 33 chr2 67996433 67996825 -182691029 - LTR16C LTR ERVL -8 483 85 207 337 11 33 chr2 67997309 67997401 -182690453 + L2 LINE L2 1209 1298 -2016 1115 309 71 9 chr2 67997405 67997842 -182690012 + LTR16B LTR ERVL 1 464 0 1506 293 158 18 chr2 67997842 67998932 -182688922 + L2 LINE L2 1298 2539 -775 964 136 57 28 chr2 67998949 67999125 -182688729 - MLT1B LTR MaLR -186 204 24 550 315 126 21 chr2 67999162 67999786 -182688068 + L2 LINE L2 2616 3313 0 551 328 39 0 chr2 68000090 68000319 -182687535 + MIR SINE MIR 25 262 0 727 245 22 11 chr2 68001327 68001511 -182686343 + L1ME LINE L1 5637 5822 -340 1865 239 26 75 chr2 68001564 68002078 -182685776 + MLT1E LTR MaLR 52 537 -56 1714 137 27 0 chr2 68002078 68002334 -182685520 + AluJb SINE Alu 1 263 -49 1865 239 26 75 chr2 68002334 68002389 -182685465 + MLT1E LTR MaLR 537 593 0 23 0 0 0 chr2 68002435 68002458 -182685396 + AT_rich Low_complexity Low_complexity 1 23 0 275 219 110 0 chr2 68002519 68002592 -182685262 - HAL1 LINE L1 -295 2212 2132 673 192 0 8 chr2 68002661 68002781 -182685073 - MLT1C LTR MaLR 0 467 349 467 179 47 0 chr2 68003686 68003792 -182684062 + MER69 DNA AcHobo 4 114 -2412 1693 164 89 17 chr2 68003815 68004163 -182683691 - MLT1A2 LTR MaLR 0 374 2 1441 251 93 8 chr2 68004264 68004651 -182683203 + MER69 DNA AcHobo 149 568 -658 * 2007 182 42 61 chr2 68004649 68005075 -182682779 + MER69 DNA AcHobo 2010 2426 -100 2027 142 0 0 chr2 68005075 68005357 -182682497 - AluSx SINE Alu -30 282 1 2007 182 42 61 chr2 68005357 68005453 -182682401 + MER69 DNA AcHobo 2426 2522 -4 567 243 41 18 chr2 68005595 68005764 -182682090 - MIR3 SINE MIR -15 193 21 266 252 133 30 chr2 68005931 68006066 -182681788 + MER5A DNA MER1_type 9 157 -32 * 322 250 103 9 chr2 68005953 68006069 -182681785 - MER5A DNA MER1_type -22 167 41 2579 190 91 56 chr2 68008074 68008699 -182679155 - MLT1E1 LTR MaLR -5 649 3 2078 227 46 28 chr2 68008943 68009441 -182678413 + MLT1G1 LTR MaLR 51 557 -38 252 0 0 0 chr2 68010598 68010626 -182677228 + (CA)n Simple_repeat Simple_repeat 2 29 0 2161 161 36 18 chr2 68011667 68012053 -182675801 + MSTB LTR MaLR 1 393 -33 2379 80 0 0 chr2 68012079 68012366 -182675488 - AluY SINE Alu -24 287 1 243 154 0 0 chr2 68012366 68012405 -182675449 + MSTB LTR MaLR 394 432 0 203 213 0 0 chr2 68012747 68012794 -182675060 + MIR SINE MIR 103 149 -113 180 243 0 0 chr2 68012835 68012872 -182674982 + L2 LINE L2 3268 3304 -9 9987 203 51 34 chr2 68013170 68013752 -182674102 - L1MDa LINE L1 -528 6108 5537 1433 125 161 4 chr2 68013752 68014000 -182673854 - AluJb SINE Alu -14 288 2 9987 203 51 34 chr2 68014000 68014427 -182673427 - L1MDa LINE L1 -1099 5537 5118 2442 61 0 7 chr2 68014427 68014723 -182673131 - AluY SINE Alu -16 295 2 9987 203 51 34 chr2 68014723 68016783 -182671071 - L1MDa LINE L1 -1518 5118 3093 2196 111 13 3 chr2 68016783 68017081 -182670773 - AluSg SINE Alu -9 301 1 9987 203 51 34 chr2 68017081 68017816 -182670038 - L1MDa LINE L1 -3543 3093 2372 2400 111 0 0 chr2 68017816 68018122 -182669732 - AluSq SINE Alu -7 306 1 9987 203 51 34 chr2 68018122 68019633 -182668221 - L1MDa LINE L1 -4264 2372 698 293 309 0 12 chr2 68019640 68019721 -182668133 - MIR SINE MIR -169 93 14 2379 88 3 0 chr2 68019847 68020142 -182667712 - AluSc SINE Alu -13 296 1 1172 294 105 14 chr2 68020491 68020920 -182666934 + LTR33 LTR ERVL 1 468 -53 241 229 101 46 chr2 68021306 68021415 -182666439 + L1ME LINE L1 5549 5663 -458 1484 175 50 7 chr2 68021758 68022038 -182665816 - AluJo SINE Alu -18 294 3 335 245 28 9 chr2 68022236 68022342 -182665512 - MIR SINE MIR -115 147 40 306 316 133 41 chr2 68022518 68022977 -182664877 + L2 LINE L2 2127 2627 -687 246 208 0 0 chr2 68023029 68023082 -182664772 + (CA)n Simple_repeat Simple_repeat 1 53 0 288 255 75 38 chr2 68023083 68023189 -182664665 + MER5B DNA MER1_type 63 172 -6 1988 144 0 23 chr2 68024100 68024405 -182663449 + AluJb SINE Alu 1 298 -14 250 220 140 20 chr2 68024700 68024800 -182663054 - MLT1L LTR MaLR -13 602 491 343 298 50 31 chr2 68024966 68025127 -182662727 - MLT1J LTR MaLR -340 171 8 234 331 73 29 chr2 68026274 68026410 -182661444 + L1MC/D LINE L1 5495 5636 -2172 332 159 0 0 chr2 68026609 68026672 -182661182 - L1MA5 LINE L1 0 6300 6238 * 1483 102 9 5 chr2 68026670 68026885 -182660969 + L1M2 LINE L1 5410 5625 -672 1669 166 3 28 chr2 68028089 68028399 -182659455 + AluJo SINE Alu 3 305 0 2417 75 3 3 chr2 68028423 68028715 -182659139 + AluSx SINE Alu 1 292 -20 911 185 58 11 chr2 68029464 68029653 -182658201 + MIR SINE MIR 1 198 -64 365 282 34 78 chr2 68029659 68029865 -182657989 + LTR16A LTR ERVL 6 202 -248 240 301 126 10 chr2 68029918 68030021 -182657833 + LTR16A LTR ERVL 331 445 -5 217 219 0 0 chr2 68030031 68030072 -182657782 + MIR SINE MIR 201 241 -21 206 171 24 0 chr2 68030573 68030614 -182657240 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 771 279 35 16 chr2 68030778 68031145 -182656709 - L2 LINE L2 -251 3062 2687 2054 136 3 13 chr2 68031146 68031447 -182656407 + AluSx SINE Alu 3 300 -12 211 54 54 0 chr2 68032559 68032596 -182655258 + A-rich Low_complexity Low_complexity 2 40 0 6915 96 4 17 chr2 68032602 68033611 -182654243 + L1MA4A LINE L1 5308 6303 0 333 0 0 0 chr2 68033653 68033690 -182654164 + (CA)n Simple_repeat Simple_repeat 1 37 0 450 244 141 70 chr2 68035972 68036271 -182651583 - LTR49 LTR ERV1 -9 586 267 897 143 186 0 chr2 68036321 68036482 -182651372 - MER34C LTR ERV1 -391 194 4 776 196 129 41 chr2 68036482 68036672 -182651182 + MER20 DNA MER1_type 13 219 0 241 281 126 37 chr2 68038011 68038146 -182649708 - MIR3 SINE MIR -23 185 39 * 426 280 51 55 chr2 68038138 68038374 -182649480 + L2 LINE L2 2553 2787 -527 774 243 191 10 chr2 68038442 68038616 -182649238 + L2 LINE L2 2927 3068 -245 1859 159 0 16 chr2 68038616 68038925 -182648929 - AluJo SINE Alu -8 304 1 774 243 191 10 chr2 68038925 68039059 -182648795 + L2 LINE L2 3068 3291 -22 772 199 73 48 chr2 68039067 68039273 -182648581 - MIR SINE MIR -16 246 36 802 46 0 28 chr2 68039702 68039810 -182648044 + AluSg/x SINE Alu 202 306 -3 228 235 25 0 chr2 68040985 68041066 -182646788 + (CG)n Simple_repeat Simple_repeat 1 83 0 22 35 0 0 chr2 68041470 68041499 -182646355 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 68042511 68042532 -182645322 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 68043387 68043410 -182644444 + AT_rich Low_complexity Low_complexity 1 23 0 1807 161 17 3 chr2 68043732 68044023 -182643831 + AluJo SINE Alu 6 300 -12 254 163 0 0 chr2 68044364 68044407 -182643447 - L1MC3 LINE L1 -269 7516 7474 472 154 33 22 chr2 68044684 68044775 -182643079 + MER5A DNA MER1_type 98 189 0 269 26 0 26 chr2 68045457 68045496 -182642358 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 27 0 0 0 chr2 68047614 68047641 -182640213 + AT_rich Low_complexity Low_complexity 1 27 0 1266 229 99 23 chr2 68048171 68048556 -182639298 - L1ME1 LINE L1 -4 6162 5749 201 69 0 0 chr2 68049086 68049115 -182638739 - L2 LINE L2 -1 3312 3284 230 243 0 33 chr2 68049205 68049272 -182638582 - MER5A DNA MER1_type -74 115 40 1342 215 40 4 chr2 68049274 68049577 -182638277 + AluJb SINE Alu 1 313 0 3681 129 6 4 chr2 68052159 68052685 -182635169 - MER1A DNA MER1_type 0 527 1 1655 165 10 31 chr2 68053070 68053361 -182634493 + AluJo SINE Alu 5 289 -23 850 209 80 5 chr2 68053733 68053781 -182634073 + MER3 DNA MER1_type 1 62 -147 252 299 115 13 chr2 68053781 68053938 -182633916 - MER3 DNA MER1_type 0 209 37 432 314 138 29 chr2 68055093 68055307 -182632547 + L2 LINE L2 3008 3252 -20 741 149 0 71 chr2 68055307 68055448 -182632406 + FLAM_C SINE Alu 2 132 -1 432 314 138 29 chr2 68055448 68055472 -182632382 + L2 LINE L2 3252 3272 0 1913 215 113 26 chr2 68055487 68055981 -182631873 - MLT1F LTR MaLR -1 541 5 404 198 16 83 chr2 68056565 68056686 -182631168 - Charlie8 DNA MER1_type -2197 220 108 440 258 73 27 chr2 68057263 68057443 -182630411 + MIR SINE MIR 5 192 -63 185 278 19 0 chr2 68057554 68057608 -182630246 - MIR SINE MIR -56 152 98 475 271 41 0 chr2 68058879 68059001 -182628853 - MIR SINE MIR -65 143 17 441 54 0 0 chr2 68059236 68059292 -182628562 + (TATG)n Simple_repeat Simple_repeat 3 58 0 765 142 18 0 chr2 68059292 68059405 -182628449 - FLAM_C SINE Alu -27 116 2 693 207 50 28 chr2 68060361 68060540 -182627314 - MLT1I LTR MaLR -18 391 209 236 193 63 72 chr2 68060683 68060792 -182627062 + MIR SINE MIR 37 145 -63 901 259 80 17 chr2 68061406 68061707 -182626147 + L1ME4a LINE L1 5513 5832 -289 1774 176 33 0 chr2 68061778 68062080 -182625774 - AluJb SINE Alu 0 312 1 2220 115 0 0 chr2 68063352 68063648 -182624206 - AluSx SINE Alu -16 296 1 376 307 50 22 chr2 68063696 68063875 -182623979 - HAL1 LINE L1 -2091 416 233 595 226 134 51 chr2 68063876 68064093 -182623761 - MLT1J2 LTR MaLR 0 450 216 985 236 8 48 chr2 68064372 68064622 -182623232 - MLT1J2 LTR MaLR -207 243 4 1049 230 5 9 chr2 68064695 68064917 -182622937 + MER58A DNA MER1_type 1 221 -3 784 199 31 61 chr2 68066058 68066254 -182621600 + LTR18B LTR ERVL 1 190 -424 * 1538 133 144 11 chr2 68066252 68066515 -182621339 + LTR18B LTR ERVL 317 614 0 466 186 115 9 chr2 68066646 68066759 -182621095 + L2 LINE L2 3186 3310 -3 390 201 96 34 chr2 68066840 68066967 -182620887 - L1ME2 LINE L1 -7 6327 6032 771 291 62 0 chr2 68067621 68067862 -182619992 + MIR SINE MIR 6 261 -1 216 0 0 0 chr2 68068239 68068263 -182619591 + (TG)n Simple_repeat Simple_repeat 1 24 0 1739 158 29 4 chr2 68068272 68068551 -182619303 - AluJb SINE Alu -26 286 1 397 333 27 16 chr2 68069764 68069950 -182617904 + MIR SINE MIR 59 246 -16 1938 234 102 19 chr2 68070205 68070747 -182617107 - MLT1E LTR MaLR 0 593 7 531 244 104 118 chr2 68070858 68071082 -182616772 + MLT1K LTR MaLR 149 366 -222 2098 151 0 0 chr2 68071082 68071394 -182616460 + AluSx SINE Alu 1 312 0 531 244 104 118 chr2 68071394 68071611 -182616243 + MLT1K LTR MaLR 366 584 -4 237 333 11 0 chr2 68071611 68071698 -182616156 + MIR3 SINE MIR 114 201 -7 642 211 11 84 chr2 68072086 68072276 -182615578 + MIR SINE MIR 54 229 -33 306 0 0 0 chr2 68074729 68074763 -182613091 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 398 254 181 0 chr2 68075446 68075584 -182612270 + MER5A DNA MER1_type 1 163 -26 21 0 0 0 chr2 68076362 68076383 -182611471 + AT_rich Low_complexity Low_complexity 1 21 0 432 146 0 0 chr2 68076940 68077024 -182610830 + (CA)n Simple_repeat Simple_repeat 1 87 -9 225 0 0 0 chr2 68077024 68077049 -182610805 + (TC)n Simple_repeat Simple_repeat 1 25 0 432 146 0 0 chr2 68077049 68077060 -182610794 + (CA)n Simple_repeat Simple_repeat 86 96 0 443 215 47 0 chr2 68077440 68077547 -182610307 + MIR SINE MIR 35 146 -116 523 280 82 73 chr2 68077550 68077569 -182610285 - L2 LINE L2 -6 3307 3290 2338 95 0 3 chr2 68077569 68077865 -182609989 + AluSg SINE Alu 1 295 -15 523 280 82 73 chr2 68077865 68078199 -182609655 - L2 LINE L2 -23 3290 2951 292 284 0 32 chr2 68079016 68079111 -182608743 - MIR3 SINE MIR -6 202 111 265 165 103 82 chr2 68079162 68079259 -182608595 - MLT1K LTR MaLR -28 560 462 1080 285 42 33 chr2 68079597 68080025 -182607829 - L2 LINE L2 0 3313 2882 504 193 21 179 chr2 68080060 68080345 -182607509 + MER102b DNA MER1_type 89 328 -13 797 265 40 87 chr2 68080361 68080739 -182607115 - MLT1I LTR MaLR -10 399 40 603 303 19 5 chr2 68080929 68081137 -182606717 + MIR SINE MIR 6 216 -46 1956 94 0 0 chr2 68081194 68081438 -182606416 + AluSx SINE Alu 59 302 -10 3498 212 63 6 chr2 68082509 68083312 -182604542 - L1MC4 LINE L1 -57 7985 7137 186 43 0 0 chr2 68084424 68084447 -182603407 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2002 110 37 4 chr2 68084449 68084721 -182603133 - AluSc SINE Alu -28 281 1 934 201 24 0 chr2 68084721 68084890 -182602964 - FAM SINE Alu -2 173 1 4448 101 2 5 chr2 68085414 68086026 -182601828 - MER4B LTR ERV1 0 610 1 1927 127 75 113 chr2 68086592 68087033 -182600821 - MSTB LTR MaLR -2 424 1 2222 104 3 3 chr2 68088253 68088551 -182599303 - AluSq SINE Alu -15 298 1 303 219 30 95 chr2 68089066 68089146 -182598708 + L1MC4a LINE L1 5705 5770 -2038 2364 66 7 0 chr2 68089146 68089435 -182598419 + AluY SINE Alu 1 291 -20 303 219 30 95 chr2 68089435 68089523 -182598331 + L1MC4a LINE L1 5770 5862 -1946 22 35 0 0 chr2 68089579 68089608 -182598246 + AT_rich Low_complexity Low_complexity 1 29 0 1496 104 80 0 chr2 68090757 68090969 -182596885 + AluSx SINE Alu 1 229 -83 966 262 155 12 chr2 68091374 68091775 -182596079 - LTR33A LTR ERVL 0 523 66 261 0 0 0 chr2 68092781 68092810 -182595044 + (TAA)n Simple_repeat Simple_repeat 2 30 0 282 287 125 45 chr2 68093113 68093472 -182594382 + L1ME4a LINE L1 5602 5989 -132 811 183 12 30 chr2 68093482 68093646 -182594208 + FRAM SINE Alu 1 156 -20 32 57 0 0 chr2 68093801 68093854 -182594000 + AT_rich Low_complexity Low_complexity 1 53 0 332 290 12 2 chr2 68094551 68094672 -182593182 - L1ME LINE L1 -370 5792 5670 1850 152 35 29 chr2 68094790 68095100 -182592754 - AluSx SINE Alu 0 312 1 529 219 225 7 chr2 68095386 68095537 -182592317 + MER5A DNA MER1_type 6 189 0 250 356 153 26 chr2 68095698 68095719 -182592135 - L2 LINE L2 -169 3103 3086 2128 51 0 0 chr2 68095719 68095973 -182591881 + AluY SINE Alu 57 310 -1 250 356 153 26 chr2 68095973 68096347 -182591507 - L2 LINE L2 -186 3086 2656 302 340 33 33 chr2 68097111 68097264 -182590590 - MIR SINE MIR -3 259 107 191 347 129 24 chr2 68097288 68097412 -182590442 + L2 LINE L2 3136 3272 0 230 373 63 32 chr2 68097454 68097580 -182590274 - MER5B DNA MER1_type -1 177 48 6237 68 37 53 chr2 68097601 68099587 -182588267 - SVA Other Other -518 1386 57 486 0 0 0 chr2 68099587 68099641 -182588213 + (GGGAGA)n Simple_repeat Simple_repeat 1 54 0 261 291 62 134 chr2 68100166 68100441 -182587413 - L2 LINE L2 -1 3271 3017 1102 303 60 14 chr2 68100476 68100909 -182586945 - LTR67 LTR ERVL 0 557 105 938 272 101 29 chr2 68100920 68101405 -182586449 - MLT1H1 LTR MaLR -9 546 27 208 270 26 70 chr2 68101522 68101637 -182586217 - L2 LINE L2 -237 3035 2926 360 255 199 56 chr2 68101982 68102233 -182585621 - L1MC4 LINE L1 0 8042 7643 219 336 146 18 chr2 68102540 68102650 -182585204 - L2 LINE L2 0 3272 3149 513 251 94 38 chr2 68102726 68103193 -182584661 - L1MC5 LINE L1 -241 7720 7289 842 212 11 0 chr2 68103879 68104058 -182583796 - MER20 DNA MER1_type -6 213 33 266 263 50 12 chr2 68104182 68104262 -182583592 - MIR SINE MIR -56 206 124 1330 147 0 5 chr2 68104415 68104619 -182583235 - AluJb SINE Alu -23 289 87 255 269 69 75 chr2 68105244 68105404 -182582450 + L2 LINE L2 3110 3268 -4 2084 119 0 0 chr2 68105543 68105864 -182581990 + AluSq SINE Alu 1 321 0 451 243 18 18 chr2 68105923 68106034 -182581820 - L2 LINE L2 -2 3311 3201 593 122 17 0 chr2 68106126 68106241 -182581613 - Charlie5 DNA MER1_type 0 2624 2508 325 233 11 11 chr2 68106615 68106705 -182581149 - MLT1A2 LTR MaLR -75 299 210 1875 135 29 0 chr2 68107242 68107543 -182580311 - AluJb SINE Alu 0 309 1 1788 164 0 4 chr2 68107592 68107906 -182579948 + AluJb SINE Alu 9 321 0 318 302 83 0 chr2 68108143 68108239 -182579615 - MIR SINE MIR -58 150 47 315 296 102 19 chr2 68108393 68108609 -182579245 + L1ME LINE L1 5495 5728 -393 332 83 0 0 chr2 68109105 68109153 -182578701 - Alu SINE Alu -12 290 243 27 73 0 0 chr2 68112838 68112893 -182574961 + AT_rich Low_complexity Low_complexity 1 55 0 764 215 11 11 chr2 68113176 68113353 -182574501 - MIR SINE MIR -24 238 62 2350 94 3 0 chr2 68113687 68113986 -182573868 + AluSp SINE Alu 1 300 -13 480 274 8 0 chr2 68114673 68114790 -182573064 - L2 LINE L2 -1 3271 3154 860 268 53 56 chr2 68115027 68115441 -182572413 - L2 LINE L2 -357 2957 2545 21 0 0 0 chr2 68115938 68115959 -182571895 + AT_rich Low_complexity Low_complexity 1 21 0 1371 155 0 5 chr2 68116022 68116235 -182571619 - AluJo SINE Alu -16 296 85 2077 130 0 7 chr2 68116260 68116561 -182571293 + AluSx SINE Alu 1 299 -13 199 175 25 0 chr2 68116919 68116959 -182570895 + L2 LINE L2 3263 3303 -10 310 263 61 18 chr2 68116963 68117077 -182570777 - L1ME4a LINE L1 -68 6053 5935 2461 89 0 0 chr2 68117168 68117470 -182570384 + AluSx SINE Alu 1 302 -10 330 304 0 8 chr2 68117556 68117681 -182570173 - L1ME4a LINE L1 -384 5737 5614 972 161 207 0 chr2 68117980 68118256 -182569598 + MER33 DNA MER1_type 1 320 -4 263 306 246 40 chr2 68118484 68119212 -182568642 - L2 LINE L2 -243 3070 2163 1929 167 0 16 chr2 68119504 68119816 -182568038 + AluJb SINE Alu 1 307 -5 228 230 68 40 chr2 68121642 68121716 -182566138 - MER5B DNA MER1_type 0 178 103 303 333 183 11 chr2 68121874 68122054 -182565800 + MIR SINE MIR 48 258 -4 197 330 131 43 chr2 68122274 68122626 -182565228 - L2 LINE L2 -693 2621 2239 2046 110 26 29 chr2 68122672 68122981 -182564873 + AluSx SINE Alu 1 308 -4 1926 174 3 0 chr2 68123059 68123370 -182564484 + AluJb SINE Alu 1 312 0 420 296 171 53 chr2 68123392 68123626 -182564228 - L1ME4a LINE L1 -234 5887 5603 1483 77 0 14 chr2 68123626 68123835 -182564019 + L1PA15 LINE L1 5959 6164 -1 420 296 171 53 chr2 68123835 68123921 -182563933 - L1ME4a LINE L1 -518 5603 5529 639 193 119 9 chr2 68124360 68124578 -182563276 - MER112 DNA MER1_type -11 249 8 233 292 77 0 chr2 68126068 68126133 -182561721 - L2 LINE L2 -50 3222 3153 426 270 26 7 chr2 68126150 68126302 -182561552 - L2 LINE L2 -1417 1897 1743 240 86 0 0 chr2 68126316 68126351 -182561503 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 511 264 73 11 chr2 68127435 68127613 -182560241 + MIR SINE MIR 70 258 -4 1428 251 59 13 chr2 68129337 68130057 -182557797 - L1ME4a LINE L1 -558 5604 4857 312 183 0 0 chr2 68130062 68130122 -182557732 - L1ME4a LINE L1 -1391 4755 4696 982 168 0 0 chr2 68131599 68131772 -182556082 + L1MC/D LINE L1 5542 5714 -645 492 182 57 30 chr2 68131835 68131967 -182555887 + L1MC/D LINE L1 5686 5821 -384 498 279 0 0 chr2 68132583 68132741 -182555113 + L1MD2 LINE L1 5548 5705 -654 756 205 80 113 chr2 68132839 68133238 -182554616 + L1MD2 LINE L1 5710 6151 -50 216 67 0 0 chr2 68133239 68133269 -182554585 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2287 85 0 0 chr2 68133274 68133557 -182554297 - AluSx SINE Alu -29 283 1 232 81 0 0 chr2 68133630 68133667 -182554187 + L1MB3 LINE L1 6140 6176 -7 2104 200 78 41 chr2 68133997 68134117 -182553737 - L1MC4 LINE L1 -141 7901 7787 2274 53 0 50 chr2 68134117 68134419 -182553435 + AluY SINE Alu 1 287 -24 216 0 0 0 chr2 68134419 68134443 -182553411 + (CATA)n Simple_repeat Simple_repeat 2 25 0 2104 200 78 41 chr2 68134443 68134961 -182552893 - L1MC4 LINE L1 -254 7788 7238 682 200 46 0 chr2 68134962 68135137 -182552717 - L1MC4 LINE L1 -954 7088 6906 1999 118 3 35 chr2 68135142 68135455 -182552399 - AluJb SINE Alu -9 303 1 2909 9 0 0 chr2 68135476 68135794 -182552060 + AluYb8 SINE Alu 1 318 0 257 250 0 0 chr2 68135823 68135883 -182551971 - L1ME LINE L1 -305 5816 5757 298 198 22 66 chr2 68135931 68136022 -182551832 - L1ME LINE L1 -541 5580 5494 294 231 130 46 chr2 68136388 68136496 -182551358 + MIR3 SINE MIR 71 187 -21 2196 119 0 0 chr2 68136673 68136966 -182550888 - AluSx SINE Alu 0 312 20 2217 205 99 57 chr2 68137359 68137619 -182550235 + L1MD2 LINE L1 5565 5813 -546 743 160 56 0 chr2 68137619 68137744 -182550110 + FLAM_A SINE Alu 2 133 0 2217 205 99 57 chr2 68137744 68138042 -182549812 + L1MD2 LINE L1 5813 6166 -193 486 0 0 0 chr2 68138042 68138096 -182549758 + (CA)n Simple_repeat Simple_repeat 1 54 0 2217 205 99 57 chr2 68138096 68138297 -182549557 + L1MD2 LINE L1 6166 6357 -2 262 326 116 29 chr2 68142356 68142528 -182545326 + MIR SINE MIR 5 191 -71 2010 131 0 0 chr2 68142643 68142918 -182544936 + AluSx SINE Alu 1 275 -37 396 0 0 0 chr2 68142920 68142964 -182544890 + (CA)n Simple_repeat Simple_repeat 1 44 0 2320 94 0 0 chr2 68143354 68143652 -182544202 - AluSx SINE Alu -14 298 1 981 108 14 0 chr2 68144850 68144989 -182542865 - AluSg/x SINE Alu -16 294 154 4618 158 55 8 chr2 68145631 68146455 -182541399 - MER6 DNA MER2_type -3 862 1 1631 197 39 109 chr2 68146594 68147078 -182540776 - MLT2B1 LTR ERVL 0 520 79 1743 186 3 0 chr2 68147078 68147368 -182540486 - AluJb SINE Alu -21 291 1 1631 197 39 109 chr2 68147368 68147442 -182540412 - MLT2B1 LTR ERVL -441 79 1 25 0 0 0 chr2 68147741 68147766 -182540088 + AT_rich Low_complexity Low_complexity 1 25 0 2164 139 0 0 chr2 68147955 68148257 -182539597 + AluSx SINE Alu 1 302 -10 1631 190 10 17 chr2 68148759 68149059 -182538795 + AluJo SINE Alu 1 298 -14 436 309 85 20 chr2 68149356 68149557 -182538297 + MIR SINE MIR 20 233 -29 239 224 153 24 chr2 68149734 68149819 -182538035 - L2 LINE L2 -27 3286 3191 955 275 21 0 chr2 68149845 68150081 -182537773 + MIR SINE MIR 1 241 -21 1573 99 0 18 chr2 68151048 68151270 -182536584 - AluSg SINE Alu -92 218 1 1168 168 0 0 chr2 68151818 68152008 -182535846 + AluSg/x SINE Alu 123 312 0 2223 111 0 3 chr2 68152205 68152503 -182535351 - AluSx SINE Alu -15 297 1 2376 84 7 0 chr2 68152560 68152858 -182534996 + AluY SINE Alu 1 300 -11 427 213 64 0 chr2 68152968 68153062 -182534792 + MER58A DNA MER1_type 9 108 0 319 194 15 15 chr2 68153062 68153118 -182534736 + MER58A DNA MER1_type 169 224 0 193 290 145 16 chr2 68154575 68154699 -182533155 + MIR SINE MIR 89 228 -34 1657 115 24 24 chr2 68155166 68155419 -182532435 + AluSx SINE Alu 44 296 -16 418 281 237 5 chr2 68155485 68155709 -182532145 - HAL1 LINE L1 -185 2322 2047 387 149 0 30 chr2 68155851 68155918 -182531936 - HAL1 LINE L1 -784 1723 1659 2124 71 42 7 chr2 68155993 68156276 -182531578 - AluSx SINE Alu -19 293 1 926 186 16 36 chr2 68158552 68158745 -182529109 - MER5A DNA MER1_type 0 189 1 198 0 0 0 chr2 68159054 68159076 -182528778 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2304 99 0 13 chr2 68159298 68159601 -182528253 + AluSq SINE Alu 1 299 -14 487 157 12 0 chr2 68160098 68160181 -182527673 + FLAM_A SINE Alu 47 130 -12 221 281 0 0 chr2 68160439 68160496 -182527358 + (TA)n Simple_repeat Simple_repeat 2 58 0 416 313 9 0 chr2 68160645 68160760 -182527094 + MIR3 SINE MIR 83 198 -10 204 125 0 0 chr2 68160797 68160829 -182527025 + (A)n Simple_repeat Simple_repeat 1 32 0 2101 125 10 0 chr2 68161030 68161319 -182526535 - AluSx SINE Alu -20 292 1 356 220 140 47 chr2 68161691 68161841 -182526013 - MER103 DNA DNA -1 165 2 1726 178 32 0 chr2 68162711 68162992 -182524862 + AluJo SINE Alu 4 293 -19 414 57 0 0 chr2 68163054 68163107 -182524747 + (TG)n Simple_repeat Simple_repeat 2 54 0 2178 117 0 0 chr2 68163112 68163403 -182524451 - AluSx SINE Alu -21 291 1 396 0 0 0 chr2 68163439 68163483 -182524371 + (CA)n Simple_repeat Simple_repeat 2 45 0 335 145 14 0 chr2 68163520 68163589 -182524265 + (TA)n Simple_repeat Simple_repeat 1 70 0 385 233 145 87 chr2 68164067 68164122 -182523732 - MIR3 SINE MIR -8 200 150 2324 100 3 3 chr2 68164122 68164423 -182523431 - AluSq SINE Alu -12 301 1 385 233 145 87 chr2 68164423 68164539 -182523315 - MIR3 SINE MIR -58 150 19 612 167 49 14 chr2 68165118 68165262 -182522592 - L1MD2 LINE L1 -17 6342 6194 414 174 161 39 chr2 68165263 68165418 -182522436 - L1MD2 LINE L1 -218 6141 5968 2216 81 10 17 chr2 68165923 68166221 -182521633 - AluSg SINE Alu -14 296 1 387 155 24 12 chr2 68166257 68166341 -182521513 + U6 snRNA snRNA 2 86 -21 2543 60 0 0 chr2 68171958 68172260 -182515594 - AluY SINE Alu -9 302 1 4235 151 66 21 chr2 68175322 68176114 -182511740 - L1MB7 LINE L1 -16 6168 5283 816 141 7 22 chr2 68176114 68176249 -182511605 - FLAM_C SINE Alu 0 133 1 4235 151 66 21 chr2 68176249 68176698 -182511156 - L1MB7 LINE L1 -901 5283 4856 22 0 0 0 chr2 68176961 68176983 -182510871 + AT_rich Low_complexity Low_complexity 1 22 0 388 266 51 47 chr2 68177473 68177747 -182510107 - L1MC5 LINE L1 -385 7576 7302 318 321 120 5 chr2 68177769 68177953 -182509901 - L1MC4a LINE L1 -458 7350 7146 180 0 0 0 chr2 68179480 68179500 -182508354 + (A)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr2 68179850 68179871 -182507983 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 68180346 68180374 -182507480 + AT_rich Low_complexity Low_complexity 1 28 0 377 270 161 12 chr2 68181183 68181359 -182506495 + MIR SINE MIR 47 254 -8 292 122 20 0 chr2 68182173 68182222 -182505632 - MLT1J LTR MaLR 0 511 462 500 209 78 13 chr2 68182237 68182390 -182505464 + MER104 DNA Tc2 18 180 0 1136 286 81 5 chr2 68182390 68182820 -182505034 - MLT1J LTR MaLR -48 463 1 347 265 88 48 chr2 68183051 68183198 -182504656 + MIR3 SINE MIR 20 172 -36 246 354 40 0 chr2 68183439 68183538 -182504316 - MIR SINE MIR -69 139 37 1056 274 165 54 chr2 68183571 68183687 -182504167 - L3 LINE CR1 -74 1503 1401 381 43 0 0 chr2 68183687 68183734 -182504120 + (CA)n Simple_repeat Simple_repeat 1 47 0 1056 274 165 54 chr2 68183734 68184398 -182503456 - L3 LINE CR1 -176 1401 636 238 271 104 0 chr2 68184452 68184548 -182503306 - L3 LINE CR1 -1076 501 396 786 155 0 63 chr2 68184603 68184713 -182503141 + FLAM_A SINE Alu 1 102 -200 2266 100 3 0 chr2 68184713 68185012 -182502842 - AluSg SINE Alu -10 300 1 786 155 0 63 chr2 68185012 68185043 -182502811 + FLAM_A SINE Alu 102 133 -169 1932 144 0 0 chr2 68185776 68186108 -182501746 - AluSx SINE Alu 0 332 1 405 249 159 40 chr2 68186799 68187000 -182500854 - MIR SINE MIR -11 251 27 286 241 103 26 chr2 68187083 68187199 -182500655 + L2 LINE L2 3136 3260 -12 874 131 0 0 chr2 68187953 68188075 -182499779 + AluJo/FLAM SINE Alu 3 124 -188 2065 141 0 3 chr2 68188078 68188368 -182499486 - AluSx SINE Alu -23 289 1 25 0 0 0 chr2 68188371 68188396 -182499458 + AT_rich Low_complexity Low_complexity 1 25 0 1874 194 17 3 chr2 68189827 68190187 -182497667 - MLT1A1 LTR MaLR 0 365 1 295 193 18 0 chr2 68190236 68190293 -182497561 + MIR SINE MIR 205 262 0 221 170 85 0 chr2 68190752 68190799 -182497055 - L2 LINE L2 0 3313 3263 342 265 88 48 chr2 68241311 68241458 -182446396 + MIR3 SINE MIR 20 172 -36 246 354 40 0 chr2 68241699 68241798 -182446056 - MIR SINE MIR -69 139 37 1187 274 166 55 chr2 68241831 68241947 -182445907 - L3 LINE CR1 -74 1503 1401 363 44 0 0 chr2 68241947 68241992 -182445862 + (CA)n Simple_repeat Simple_repeat 1 45 0 1187 274 166 55 chr2 68241992 68242656 -182445198 - L3 LINE CR1 -176 1401 636 260 271 104 0 chr2 68242710 68242806 -182445048 - L3 LINE CR1 -1076 501 396 815 155 0 63 chr2 68242861 68242971 -182444883 + FLAM_A SINE Alu 1 102 -200 2286 101 3 0 chr2 68242971 68243268 -182444586 - AluSg SINE Alu -12 298 1 815 155 0 63 chr2 68243268 68243299 -182444555 + FLAM_A SINE Alu 102 133 -169 2000 140 0 0 chr2 68244032 68244352 -182443502 - AluSx SINE Alu 0 320 1 423 279 151 11 chr2 68245043 68245222 -182442632 - MIR SINE MIR -11 251 48 304 241 103 26 chr2 68245327 68245443 -182442411 + L2 LINE L2 3136 3260 -12 890 131 0 0 chr2 68246197 68246319 -182441535 + AluJo/FLAM SINE Alu 3 124 -188 2092 141 0 3 chr2 68246322 68246612 -182441242 - AluSx SINE Alu -23 289 1 25 0 0 0 chr2 68246615 68246640 -182441214 + AT_rich Low_complexity Low_complexity 1 25 0 1991 194 17 3 chr2 68248071 68248431 -182439423 - MLT1A1 LTR MaLR 0 365 1 295 193 18 0 chr2 68248480 68248537 -182439317 + MIR SINE MIR 205 262 0 227 170 85 0 chr2 68248996 68249043 -182438811 - L2 LINE L2 0 3313 3263 526 297 64 47 chr2 68249195 68249509 -182438345 - L1MC4 LINE L1 -131 7911 7587 2266 129 11 22 chr2 68249509 68249874 -182437980 - L1PA16 LINE L1 0 6166 5806 526 297 64 47 chr2 68249874 68249967 -182437887 - L1MC4 LINE L1 -455 7587 7497 571 313 118 15 chr2 68250140 68250472 -182437382 + L2 LINE L2 2946 3311 -2 754 260 108 14 chr2 68251494 68251717 -182436137 - MIR SINE MIR 0 262 19 304 274 118 0 chr2 68251734 68251836 -182436018 - MIR SINE MIR -64 198 85 214 256 0 0 chr2 68253105 68253148 -182434706 + (CA)n Simple_repeat Simple_repeat 2 44 0 431 276 37 8 chr2 68253934 68254068 -182433786 - MIR3 SINE MIR -24 184 47 716 194 8 15 chr2 68254074 68254208 -182433646 + FLAM_A SINE Alu 1 133 0 2609 52 7 7 chr2 68254209 68254516 -182433338 + AluSx SINE Alu 1 307 -5 185 0 40 0 chr2 68254523 68254548 -182433306 + (GGAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr2 68255071 68255099 -182432755 + GC_rich Low_complexity Low_complexity 1 28 0 320 279 104 26 chr2 68255283 68255437 -182432417 + MER5A DNA MER1_type 20 185 -4 23 68 0 0 chr2 68256021 68256065 -182431789 + AT_rich Low_complexity Low_complexity 1 44 0 249 192 19 0 chr2 68256508 68256560 -182431294 + L1ME LINE L1 5617 5669 -452 1995 99 35 14 chr2 68256581 68256883 -182430971 + AluSx SINE Alu 1 312 0 676 273 87 15 chr2 68256884 68257215 -182430639 + HAL1b LINE L1 1194 1341 -7 224 280 130 63 chr2 68257218 68257425 -182430429 - L2 LINE L2 -8 3264 3044 528 237 118 38 chr2 68257470 68257667 -182430187 + MIR SINE MIR 33 252 -10 2155 90 35 10 chr2 68257925 68258213 -182429641 + AluSp SINE Alu 4 298 -15 269 144 18 0 chr2 68258354 68258410 -182429444 - MIR SINE MIR -36 172 114 442 207 24 193 chr2 68259278 68259491 -182428363 - MER5B DNA MER1_type 0 178 2 462 261 15 6 chr2 68259502 68259683 -182428171 + L1ME4a LINE L1 5281 5467 -849 402 319 12 0 chr2 68259903 68260069 -182427785 + L1ME4a LINE L1 5721 5888 -233 341 320 55 50 chr2 68260160 68260212 -182427642 + L1ME4a LINE L1 5939 5989 -132 1522 179 6 78 chr2 68260212 68260531 -182427323 + AluJo SINE Alu 1 296 -16 341 320 55 50 chr2 68260531 68260659 -182427195 + L1ME4a LINE L1 5989 6120 -1 46 19 0 0 chr2 68260659 68260712 -182427142 + AT_rich Low_complexity Low_complexity 1 53 0 706 274 23 16 chr2 68260953 68261183 -182426671 + MIR SINE MIR 20 250 -12 414 0 0 0 chr2 68262666 68262712 -182425142 + (CA)n Simple_repeat Simple_repeat 2 47 0 199 337 75 48 chr2 68263723 68263910 -182423944 - L2 LINE L2 -87 3185 2994 380 305 94 17 chr2 68264450 68264544 -182423310 - L2 LINE L2 -86 3227 3142 1566 94 0 102 chr2 68264544 68264644 -182423210 - MER30 DNA MER1_type 0 230 121 2196 122 0 3 chr2 68264644 68264940 -182422914 - AluSx SINE Alu -17 295 1 1566 94 0 102 chr2 68264940 68265095 -182422759 - MER30 DNA MER1_type -109 121 1 380 305 94 17 chr2 68265095 68265233 -182422621 - L2 LINE L2 -171 3142 2977 1380 240 26 3 chr2 68265557 68265936 -182421918 + L1MC2 LINE L1 4362 4749 -1397 726 180 78 0 chr2 68265948 68266076 -182421778 + FRAM SINE Alu 19 156 -20 4547 153 57 3 chr2 68266077 68267200 -182420654 + L1MC2 LINE L1 4990 6164 -180 1435 167 29 4 chr2 68267209 68267482 -182420372 + AluJo SINE Alu 33 311 0 480 178 30 117 chr2 68267482 68267556 -182420298 + L1MC2 LINE L1 6165 6244 -100 2221 110 0 16 chr2 68267556 68267866 -182419988 + AluSg SINE Alu 1 305 -5 480 178 30 117 chr2 68267866 68267988 -182419866 + L1MC2 LINE L1 6244 6344 0 290 343 28 0 chr2 68268542 68268650 -182419204 + MIR SINE MIR 141 251 -11 697 237 94 138 chr2 68268782 68269410 -182418444 - L2 LINE L2 -3 3310 2701 2334 99 0 0 chr2 68269410 68269713 -182418141 - AluSx SINE Alu -9 303 1 697 237 94 138 chr2 68269713 68269977 -182417877 - L2 LINE L2 -612 2701 2427 261 275 64 55 chr2 68270421 68270530 -182417324 + MIR SINE MIR 54 163 -99 748 180 0 14 chr2 68270729 68270868 -182416986 + FLAM_A SINE Alu 6 142 0 342 285 8 0 chr2 68271422 68271545 -182416309 + GA-rich Low_complexity Low_complexity 2 125 0 804 189 85 0 chr2 68271686 68271839 -182416015 + FRAM SINE Alu 1 166 0 2369 92 0 20 chr2 68272323 68272627 -182415227 + AluSg SINE Alu 1 298 -12 314 164 27 118 chr2 68273499 68273609 -182414245 - MIR SINE MIR -84 124 25 685 242 91 5 chr2 68273795 68273993 -182413861 + MIR SINE MIR 36 250 -12 194 271 57 43 chr2 68274243 68274313 -182413541 + MIR SINE MIR 23 93 -115 * 636 268 134 13 chr2 68274304 68274528 -182413326 - MIR SINE MIR -7 255 5 311 286 30 89 chr2 68274484 68274652 -182413202 + MIR3 SINE MIR 40 197 -11 * 1116 243 9 0 chr2 68274859 68275081 -182412773 - MER58A DNA MER1_type 0 224 1 335 194 48 0 chr2 68275492 68275554 -182412300 - L2 LINE L2 -5 3308 3244 2157 174 91 5 chr2 68275804 68276234 -182411620 - MLT1C LTR MaLR 0 467 1 237 278 126 39 chr2 68276849 68277104 -182410750 - L2 LINE L2 -1025 2289 2013 189 74 0 0 chr2 68279724 68279751 -182408103 + (CAA)n Simple_repeat Simple_repeat 1 27 0 31 0 0 0 chr2 68279759 68279790 -182408064 + AT_rich Low_complexity Low_complexity 1 31 0 186 171 0 0 chr2 68280737 68280778 -182407076 + (TG)n Simple_repeat Simple_repeat 2 42 0 347 330 0 60 chr2 68283464 68283649 -182404205 - L3b LINE CR1 -257 1326 1153 854 235 109 10 chr2 68284813 68285107 -182402747 + MER5C DNA MER1_type 2 324 0 442 308 63 7 chr2 68287061 68287204 -182400650 + L2 LINE L2 3121 3271 -1 680 271 65 0 chr2 68287471 68287641 -182400213 - MER5A DNA MER1_type -6 183 3 22 35 0 0 chr2 68288121 68288150 -182399704 + AT_rich Low_complexity Low_complexity 1 29 0 2383 60 7 0 chr2 68289212 68289524 -182398330 + AluY SINE Alu 2 315 0 427 265 9 90 chr2 68291719 68291930 -182395924 + L1MC5 LINE L1 7741 7934 -27 21 71 0 0 chr2 68295879 68295921 -182391933 + AT_rich Low_complexity Low_complexity 1 42 0 474 252 135 107 chr2 68298916 68299345 -182388509 + L1M2 LINE L1 766 1206 -5643 210 180 0 0 chr2 68299587 68299648 -182388206 + (CCCCG)n Simple_repeat Simple_repeat 5 65 0 32 0 0 0 chr2 68299671 68299703 -182388151 + GC_rich Low_complexity Low_complexity 1 32 0 1539 192 39 4 chr2 68302010 68302291 -182385563 + AluJo SINE Alu 1 291 -21 218 328 61 22 chr2 68304003 68304183 -182383671 + MIR3 SINE MIR 21 207 -1 2378 79 3 7 chr2 68304507 68304811 -182383043 - AluSp SINE Alu -10 303 1 220 270 9 96 chr2 68304814 68304929 -182382925 - MIR SINE MIR -50 212 108 241 213 66 33 chr2 68305351 68305412 -182382442 + L2 LINE L2 3188 3250 -22 22 0 0 0 chr2 68305771 68305793 -182382061 + AT_rich Low_complexity Low_complexity 1 22 0 1560 82 0 5 chr2 68305793 68305989 -182381865 + AluSq SINE Alu 110 304 -9 207 0 0 0 chr2 68306753 68306776 -182381078 + (CA)n Simple_repeat Simple_repeat 2 24 0 1915 126 0 7 chr2 68306789 68307060 -182380794 + AluSx SINE Alu 1 269 -43 830 277 92 37 chr2 68308054 68308453 -182379401 + L1MC/D LINE L1 4488 4929 -1217 1413 167 67 43 chr2 68308453 68308583 -182379271 + AluJo SINE Alu 1 126 -186 2115 96 0 11 chr2 68308583 68308895 -182378959 + AluSg SINE Alu 1 309 0 1413 167 67 43 chr2 68308895 68309045 -182378809 + AluJo SINE Alu 126 289 -23 830 277 92 37 chr2 68309045 68309211 -182378643 + L1MC/D LINE L1 4929 5084 -1062 919 327 93 13 chr2 68309235 68309685 -182378169 + LTR33 LTR ERVL 30 515 -6 312 258 159 29 chr2 68309699 68310003 -182377851 + L1MC/D LINE L1 5101 5428 -743 774 122 24 8 chr2 68310011 68310134 -182377720 + AluJo SINE Alu 10 134 -178 366 259 40 99 chr2 68310136 68310294 -182377560 + L1MC/D LINE L1 5429 5574 -596 1828 153 27 3 chr2 68310294 68310594 -182377260 - AluJb SINE Alu -5 307 1 366 259 40 99 chr2 68310594 68310636 -182377218 + L1MC/D LINE L1 5574 5617 -553 698 195 37 55 chr2 68310674 68310737 -182377117 - MER105 DNA DNA -42 162 99 783 200 70 35 chr2 68310737 68310937 -182376917 + MER63A DNA MER1_type 3 209 -1 698 195 37 55 chr2 68310937 68311037 -182376817 - MER105 DNA DNA -105 99 2 256 208 0 0 chr2 68311102 68311150 -182376704 + L1MC/D LINE L1 5702 5749 -2059 467 281 141 5 chr2 68313789 68313988 -182373866 + L2 LINE L2 1892 2117 -1197 668 277 105 70 chr2 68314223 68314393 -182373461 + L2 LINE L2 2113 2276 -1038 580 274 0 7 chr2 68314393 68314528 -182373326 - MER94 DNA DNA 0 134 1 668 277 105 70 chr2 68314528 68314902 -182372952 + L2 LINE L2 2276 2676 -638 181 340 19 0 chr2 68314905 68314958 -182372896 - L2 LINE L2 -31 3241 3188 30 69 0 0 chr2 68315461 68315519 -182372335 + AT_rich Low_complexity Low_complexity 1 58 0 458 315 22 27 chr2 68316155 68316339 -182371515 + L1ME LINE L1 5499 5681 -440 846 214 7 0 chr2 68316354 68316523 -182371331 - FRAM SINE Alu 0 170 1 631 234 47 104 chr2 68316524 68316571 -182371283 - L2 LINE L2 -11 3302 3254 2225 132 0 0 chr2 68316571 68316882 -182370972 - AluSq SINE Alu -2 311 1 631 234 47 104 chr2 68316882 68317133 -182370721 - L2 LINE L2 -59 3254 3021 1889 123 76 0 chr2 68317133 68317410 -182370444 + AluY SINE Alu 1 298 -13 828 110 0 17 chr2 68317494 68317612 -182370242 - FLAM_C SINE Alu -17 126 11 294 246 36 10 chr2 68317783 68317880 -182369974 + MLT1J LTR MaLR 114 276 -309 2020 118 34 20 chr2 68317924 68318221 -182369633 + AluJo SINE Alu 1 301 -11 259 130 0 0 chr2 68318254 68318300 -182369554 + Alu SINE Alu 257 302 0 301 217 104 47 chr2 68318523 68318629 -182369225 - MER5A DNA MER1_type -30 159 48 2030 178 114 14 chr2 68318630 68319051 -182368803 - MLT1D LTR MaLR 0 505 43 290 189 0 0 chr2 68319096 68319149 -182368705 + MLT1L LTR MaLR 555 607 -8 253 306 57 32 chr2 68319247 68319393 -182368461 + MER5B DNA MER1_type 21 189 0 268 298 18 35 chr2 68319395 68319509 -182368345 + MIR SINE MIR 105 216 -46 2331 84 7 3 chr2 68319544 68319840 -182368014 + AluSx SINE Alu 1 297 -15 825 148 0 22 chr2 68320195 68320330 -182367524 + FLAM_C SINE Alu 2 133 -10 271 277 99 51 chr2 68320931 68321116 -182366738 - MIR SINE MIR -50 212 22 203 79 26 0 chr2 68321226 68321264 -182366590 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 219 69 0 0 chr2 68321854 68321883 -182365971 + (A)n Simple_repeat Simple_repeat 1 29 0 612 280 46 55 chr2 68322041 68322259 -182365595 + MIR SINE MIR 23 238 -24 189 302 38 0 chr2 68322587 68322640 -182365214 - L2 LINE L2 -5 3267 3213 817 165 0 0 chr2 68322900 68323015 -182364839 + FLAM_A SINE Alu 1 115 -18 198 0 0 0 chr2 68323018 68323040 -182364814 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2306 108 0 0 chr2 68323535 68323832 -182364022 + AluSx SINE Alu 1 297 -15 1908 95 0 4 chr2 68326446 68326727 -182361127 + AluSx SINE Alu 34 313 0 2727 157 60 35 chr2 68326745 68327292 -182360562 - L1MB4 LINE L1 -33 6147 5587 2231 242 141 12 chr2 68327391 68328109 -182359745 + L2 LINE L2 1886 2695 -619 1272 109 0 6 chr2 68328111 68328286 -182359568 - AluSq SINE Alu -5 308 135 1332 266 61 65 chr2 68328287 68328839 -182359015 + L2 LINE L2 2690 3249 -64 1449 210 51 46 chr2 68328839 68329211 -182358643 + MLT1A2 LTR MaLR 1 374 0 1332 266 61 65 chr2 68329211 68329273 -182358581 + L2 LINE L2 3249 3310 -3 222 347 211 0 chr2 68329374 68329469 -182358385 - L2 LINE L2 -13 3259 3145 4770 159 73 15 chr2 68329486 68330560 -182357294 - L1MD1 LINE L1 0 6242 5107 628 222 113 19 chr2 68331533 68331720 -182356134 + MLT1J LTR MaLR 4 159 -250 1618 253 108 36 chr2 68331976 68332529 -182355325 + MLT1E LTR MaLR 1 593 0 2423 89 3 0 chr2 68332573 68332877 -182354977 + AluSp SINE Alu 1 305 -8 681 121 0 0 chr2 68333419 68333518 -182354336 - L1MB8 LINE L1 -5 6173 6075 829 158 23 2 chr2 68333663 68333922 -182353932 + AluJb SINE Alu 1 311 -1 200 291 101 0 chr2 68334313 68334392 -182353462 - L2 LINE L2 -12 3301 3215 406 313 35 0 chr2 68334576 68334691 -182353163 + L2 LINE L2 3150 3268 -4 26 30 0 0 chr2 68335349 68335382 -182352472 + AT_rich Low_complexity Low_complexity 1 33 0 3489 213 59 83 chr2 68337115 68337932 -182349922 - L1MEc LINE L1 -2912 3303 2467 2051 184 175 36 chr2 68337932 68338428 -182349426 - MLT1F1 LTR MaLR -2 565 1 3489 213 59 83 chr2 68338428 68338471 -182349383 - L1MEc LINE L1 -3748 2467 2424 2590 77 0 0 chr2 68338471 68338783 -182349071 - AluSx SINE Alu 0 312 1 3489 213 59 83 chr2 68338783 68339108 -182348746 - L1MEc LINE L1 -3791 2424 2093 2151 113 42 24 chr2 68339108 68339445 -182348409 - L1MA3 LINE L1 -1 6304 5962 3489 213 59 83 chr2 68339445 68339605 -182348249 - L1MEc LINE L1 -4122 2093 1931 2236 99 3 0 chr2 68339605 68339898 -182347956 - AluSg SINE Alu -15 295 2 3489 213 59 83 chr2 68339898 68339923 -182347931 - L1MEc LINE L1 -4284 1931 1907 1197 188 83 0 chr2 68339923 68340141 -182347713 + MER46A DNA MER2_type 1 236 0 3489 213 59 83 chr2 68340141 68340538 -182347316 - L1MEc LINE L1 -4308 1907 1604 2157 95 0 7 chr2 68340540 68340853 -182347001 - AluSx SINE Alu 0 315 5 313 206 0 27 chr2 68340876 68340949 -182346905 - L1MEc LINE L1 -5676 720 650 893 196 43 27 chr2 68340951 68341135 -182346719 - MER20 DNA MER1_type -1 218 32 3027 171 49 9 chr2 68341166 68341699 -182346155 + MER68 LTR ERV1 9 562 0 691 267 136 26 chr2 68341725 68342114 -182345740 - L1MEc LINE L1 -5948 448 17 562 193 200 13 chr2 68342428 68342578 -182345276 + MIR SINE MIR 7 184 -78 265 280 40 90 chr2 68342645 68342745 -182345109 - L2 LINE L2 -39 3233 3139 423 291 95 7 chr2 68342837 68342985 -182344869 - MIR SINE MIR -71 191 31 215 222 0 0 chr2 68343008 68343044 -182344810 + MIR SINE MIR 6 41 -221 404 221 0 13 chr2 68345286 68345363 -182342491 + FRAM/FAM SINE Alu 1 76 -109 2605 106 13 24 chr2 68345380 68345759 -182342095 + THE1C LTR MaLR 1 375 0 510 61 0 0 chr2 68346238 68346304 -182341550 + (TC)n Simple_repeat Simple_repeat 1 66 0 2211 111 3 3 chr2 68346304 68346610 -182341244 - AluSx SINE Alu -6 306 1 1023 286 111 25 chr2 68346843 68347248 -182340606 + MLT1K LTR MaLR 13 452 -136 2232 49 7 17 chr2 68347430 68347744 -182340110 - AluY SINE Alu 0 311 1 540 309 83 31 chr2 68347862 68348306 -182339548 + L1ME4a LINE L1 5566 6032 -89 998 250 57 8 chr2 68349280 68349528 -182338326 + MIR SINE MIR 2 261 -1 2305 113 0 0 chr2 68350078 68350378 -182337476 - AluSx SINE Alu -12 300 1 840 286 5 0 chr2 68350965 68351182 -182336672 - MIR SINE MIR -42 220 3 268 309 75 0 chr2 68352062 68352156 -182335698 + L2 LINE L2 1846 1946 -1368 243 0 0 0 chr2 68352161 68352188 -182335666 + (TC)n Simple_repeat Simple_repeat 1 27 0 5205 121 16 24 chr2 68352254 68353436 -182334418 + L1PA15 LINE L1 4980 6156 -9 591 192 32 8 chr2 68353467 68353592 -182334262 - MER5B DNA MER1_type -49 129 2 359 267 5 53 chr2 68353611 68353798 -182334056 - L1MA4A LINE L1 -265 6038 5861 331 214 17 34 chr2 68353720 68353837 -182334017 - L1MA9 LINE L1 -374 5938 5824 * 257 296 256 35 chr2 68354090 68354512 -182333342 + L2 LINE L2 1293 1807 -1507 600 297 148 31 chr2 68354512 68355024 -182332830 + L2 LINE L2 2066 2637 -677 2228 98 3 0 chr2 68355303 68355636 -182332218 - AluSq SINE Alu 0 334 1 507 317 247 7 chr2 68355752 68356209 -182331645 - L1 LINE L1 -1314 4832 4266 283 355 38 11 chr2 68356245 68356428 -182331426 - L2 LINE L2 -912 2402 2215 2026 150 0 6 chr2 68356519 68356832 -182331022 + AluSx SINE Alu 1 311 -1 227 292 43 12 chr2 68357488 68357649 -182330205 + L1ME4a LINE L1 5954 6119 -2 628 216 94 0 chr2 68358181 68358377 -182329477 + MIR SINE MIR 19 236 -26 2241 116 0 3 chr2 68358387 68358697 -182329157 + AluSq SINE Alu 1 309 -4 1723 154 54 17 chr2 68358744 68359042 -182328812 - AluJb SINE Alu -3 309 1 323 261 93 56 chr2 68359064 68359225 -182328629 - MIR SINE MIR -95 167 1 205 302 167 45 chr2 68359230 68359452 -182328402 - MIR SINE MIR 0 262 14 206 244 0 56 chr2 68359469 68359559 -182328295 - MER5B DNA MER1_type -32 146 62 228 319 56 35 chr2 68359662 68359806 -182328048 - L2 LINE L2 -553 2761 2615 2164 124 7 7 chr2 68359992 68360299 -182327555 + AluSx SINE Alu 1 307 -5 1448 187 4 4 chr2 68360506 68360752 -182327102 + AluJb SINE Alu 40 285 -27 250 40 0 80 chr2 68360759 68360809 -182327045 + (TAAAA)n Simple_repeat Simple_repeat 5 50 0 25 0 0 0 chr2 68360841 68360866 -182326988 + AT_rich Low_complexity Low_complexity 1 25 0 315 263 82 16 chr2 68361099 68361293 -182326561 + L1ME LINE L1 5597 5803 -318 386 313 87 38 chr2 68362606 68362871 -182324983 + L2 LINE L2 2835 3112 -160 210 136 0 0 chr2 68363021 68363065 -182324789 + (TG)n Simple_repeat Simple_repeat 2 45 0 2531 40 3 3 chr2 68363102 68363406 -182324448 + AluY SINE Alu 1 304 -7 223 250 217 11 chr2 68363467 68363559 -182324295 - MER5B DNA MER1_type -1 177 67 601 314 24 36 chr2 68363896 68364144 -182323710 - MIR SINE MIR -2 260 16 355 280 109 51 chr2 68365404 68365579 -182322275 + MIR SINE MIR 8 192 -70 2168 122 3 0 chr2 68365888 68366183 -182321671 + AluSq SINE Alu 1 296 -17 5534 153 79 68 chr2 68366705 68367216 -182320638 + Charlie1a DNA MER1_type 26 530 -2231 1698 158 19 44 chr2 68367216 68367533 -182320321 + AluJo SINE Alu 1 309 -3 5534 153 79 68 chr2 68367533 68368435 -182319419 + Charlie1a DNA MER1_type 530 1455 0 460 202 110 0 chr2 68368435 68368544 -182319310 - L1ME LINE L1 -514 5656 5536 413 271 0 8 chr2 68368751 68368869 -182318985 - MER112 DNA MER1_type -39 221 105 2486 66 0 3 chr2 68369129 68369432 -182318422 - AluY SINE Alu -9 302 1 829 236 41 4 chr2 68369903 68370149 -182317705 - MER112 DNA MER1_type 0 256 2 250 211 0 95 chr2 68370367 68370462 -182317392 + MLT1K LTR MaLR 337 422 -166 2388 81 3 0 chr2 68370801 68371097 -182316757 + AluSc SINE Alu 1 297 -12 2067 79 79 0 chr2 68371343 68371622 -182316232 + AluSq SINE Alu 1 301 -12 448 199 99 62 chr2 68373169 68373330 -182314524 + MIR SINE MIR 63 229 -33 2744 7 0 3 chr2 68374174 68374476 -182313378 + AluYa5 SINE Alu 1 301 -10 2478 79 0 0 chr2 68374631 68374934 -182312920 - AluSx SINE Alu -9 303 1 189 327 119 59 chr2 68375938 68376140 -182311714 + MIR SINE MIR 7 220 -42 188 421 19 0 chr2 68377269 68377376 -182310478 + MIR SINE MIR 47 155 -107 2052 81 4 0 chr2 68378533 68378792 -182309062 + AluSp SINE Alu 50 309 -4 21 0 0 0 chr2 68380772 68380793 -182307061 + AT_rich Low_complexity Low_complexity 1 21 0 1636 99 0 5 chr2 68381495 68381708 -182306146 - AluSg/x SINE Alu -16 294 83 692 213 0 0 chr2 68381997 68382119 -182305735 - FLAM_A SINE Alu -11 122 1 21 57 0 0 chr2 68382214 68382249 -182305605 + AT_rich Low_complexity Low_complexity 1 35 0 2583 52 3 0 chr2 68382382 68382690 -182305164 + AluY SINE Alu 1 309 -2 225 265 60 12 chr2 68382808 68382891 -182304963 - MIR SINE MIR -66 196 110 296 244 138 8 chr2 68383186 68383309 -182304545 + MLT1L LTR MaLR 475 613 -2 729 241 32 48 chr2 68383726 68383975 -182303879 + L1MC4 LINE L1 7781 8025 -17 1710 181 0 20 chr2 68384287 68384424 -182303430 + AluJb SINE Alu 1 139 -173 2347 98 3 10 chr2 68384424 68384731 -182303123 + AluSq SINE Alu 1 305 -8 1710 181 0 20 chr2 68384731 68384896 -182302958 + AluJb SINE Alu 139 297 -15 2121 79 65 4 chr2 68385536 68385815 -182302039 + AluSq SINE Alu 1 296 -17 481 45 80 57 chr2 68385862 68386038 -182301816 + (TA)n Simple_repeat Simple_repeat 1 180 0 2131 79 4 14 chr2 68386038 68386318 -182301536 - AluSq SINE Alu 0 313 37 354 234 102 0 chr2 68386364 68386492 -182301362 - L1MA10 LINE L1 -1 6333 6193 2161 101 0 24 chr2 68386650 68386970 -182300884 - AluSx SINE Alu 0 312 1 1565 177 17 17 chr2 68387448 68387736 -182300118 - AluJo SINE Alu -24 288 1 389 300 0 25 chr2 68388894 68389014 -182298840 + L2 LINE L2 3197 3313 0 180 0 0 0 chr2 68389587 68389607 -182298247 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 25 0 0 0 chr2 68390781 68390806 -182297048 + AT_rich Low_complexity Low_complexity 1 25 0 22 70 0 0 chr2 68390839 68390882 -182296972 + AT_rich Low_complexity Low_complexity 1 43 0 230 352 11 11 chr2 68391367 68391455 -182296399 - MIR SINE MIR -95 113 26 22 0 0 0 chr2 68391817 68391839 -182296015 + AT_rich Low_complexity Low_complexity 1 22 0 190 379 136 0 chr2 68392876 68393008 -182294846 - L2 LINE L2 -1 3271 3122 2338 116 0 0 chr2 68393141 68393451 -182294403 + AluSx SINE Alu 3 312 0 1421 129 153 20 chr2 68393465 68393713 -182294141 - AluJb SINE Alu -31 281 1 804 215 108 11 chr2 68393904 68394090 -182293764 - MIR SINE MIR -31 231 28 880 135 0 35 chr2 68394094 68394235 -182293619 - FLAM_C SINE Alu 0 143 8 420 233 105 40 chr2 68394306 68394480 -182293374 - MIR SINE MIR -51 211 25 186 103 0 0 chr2 68395750 68395779 -182292075 + (GGGA)n Simple_repeat Simple_repeat 1 29 0 240 35 0 0 chr2 68396370 68396399 -182291455 + (GGA)n Simple_repeat Simple_repeat 2 30 0 29 28 0 0 chr2 68396462 68396498 -182291356 + GC_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr2 68397142 68397175 -182290679 + GC_rich Low_complexity Low_complexity 1 33 0 230 211 0 19 chr2 68398111 68398163 -182289691 + (TA)n Simple_repeat Simple_repeat 1 51 0 2259 93 0 29 chr2 68398639 68398950 -182288904 + AluSx SINE Alu 1 302 -10 201 417 17 9 chr2 68399289 68399404 -182288450 + MER5A DNA MER1_type 68 183 -6 33 43 0 0 chr2 68399382 68399429 -182288425 + AT_rich Low_complexity Low_complexity 1 47 0 * 2432 82 0 0 chr2 68399529 68399838 -182288016 - AluSg SINE Alu -14 296 1 2285 42 0 11 chr2 68400603 68400868 -182286986 - AluY SINE Alu -37 274 13 565 221 21 14 chr2 68400914 68401054 -182286800 + L1ME3A LINE L1 603 743 -5376 361 223 0 10 chr2 68401111 68401214 -182286640 + L1 LINE L1 3674 3775 -2371 467 314 88 29 chr2 68401370 68401755 -182286099 + L1ME3A LINE L1 3873 4280 -1849 1314 204 165 71 chr2 68401762 68402198 -182285656 + MLT1J LTR MaLR 35 511 0 1722 126 14 22 chr2 68402243 68402520 -182285334 + AluSx SINE Alu 32 306 -6 266 263 221 17 chr2 68402569 68402809 -182285045 + L1ME3A LINE L1 4353 4641 -1488 273 226 49 0 chr2 68402841 68402952 -182284902 + L1ME3A LINE L1 4764 4875 -1254 237 271 59 0 chr2 68403253 68403338 -182284516 - MLT1I LTR MaLR -279 130 41 803 293 36 58 chr2 68403408 68404436 -182283418 + L1ME3A LINE L1 4885 5886 -263 1072 91 0 0 chr2 68404839 68404971 -182282883 + AluSq/x SINE Alu 4 135 -177 2289 73 0 40 chr2 68404971 68405273 -182282581 + AluY SINE Alu 1 290 -21 1998 107 7 31 chr2 68406412 68406549 -182281305 + AluSx SINE Alu 1 140 -173 2461 77 3 7 chr2 68406549 68406859 -182280995 + AluY SINE Alu 1 309 -2 1998 107 7 31 chr2 68406859 68407041 -182280813 + AluSx SINE Alu 140 313 0 4101 199 88 6 chr2 68407478 68408346 -182279508 - MER45B DNA AcHobo -72 968 30 317 233 78 22 chr2 68408622 68408712 -182279142 - L1ME4a LINE L1 -39 6082 5988 424 286 41 7 chr2 68409150 68409297 -182278557 + L1ME3A LINE L1 5982 6133 -20 207 130 74 0 chr2 68409894 68409948 -182277906 + (TA)n Simple_repeat Simple_repeat 2 59 0 201 297 14 0 chr2 68410237 68410311 -182277543 - MIR SINE MIR -3 259 185 24 32 0 0 chr2 68410770 68410801 -182277053 + AT_rich Low_complexity Low_complexity 1 31 0 4809 98 18 18 chr2 68410984 68411720 -182276134 + L1MA3 LINE L1 5570 6305 0 583 227 189 21 chr2 68412126 68412364 -182275490 - L1MC4a LINE L1 -1852 5956 5679 294 143 0 0 chr2 68414328 68414377 -182273477 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 216 0 0 0 chr2 68414406 68414430 -182273424 + (T)n Simple_repeat Simple_repeat 1 24 0 191 36 36 0 chr2 68414903 68414931 -182272923 + (TTA)n Simple_repeat Simple_repeat 2 30 0 638 175 0 9 chr2 68414931 68415045 -182272809 - AluJb SINE Alu -194 118 6 492 214 35 147 chr2 68415874 68416159 -182271695 - MIR SINE MIR 0 262 10 842 204 15 36 chr2 68416760 68416956 -182270898 + MIR SINE MIR 1 192 -70 310 283 232 7 chr2 68417286 68417424 -182270430 + MIR3 SINE MIR 4 172 -36 604 243 90 95 chr2 68417512 68417923 -182269931 + MLT1K LTR MaLR 180 588 0 13677 111 34 11 chr2 68419779 68420731 -182267123 - Tigger1 DNA MER2_type 0 2418 1489 1787 185 3 3 chr2 68420731 68421034 -182266820 + AluJo SINE Alu 1 303 -9 13677 111 34 11 chr2 68421034 68422104 -182265750 - Tigger1 DNA MER2_type -929 1489 346 231 36 0 0 chr2 68422104 68422132 -182265722 + (GA)n Simple_repeat Simple_repeat 1 28 0 13677 111 34 11 chr2 68422132 68422159 -182265695 - Tigger1 DNA MER2_type -2072 346 321 911 176 6 0 chr2 68422157 68422316 -182265538 - Tigger1 DNA MER2_type -2203 215 56 * 180 0 0 0 chr2 68423137 68423157 -182264697 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 247 335 77 28 chr2 68423163 68423345 -182264509 - L2 LINE L2 -4 3309 3119 1068 209 107 84 chr2 68423386 68423741 -182264113 + MLT1A2 LTR MaLR 1 363 -11 430 167 33 11 chr2 68424072 68424162 -182263692 + Charlie4a DNA MER1_type 253 344 -164 500 220 86 62 chr2 68424178 68424387 -182263467 + L2 LINE L2 3090 3303 -10 2465 87 3 0 chr2 68425449 68425758 -182262096 - AluSp SINE Alu -3 310 1 2269 96 10 0 chr2 68426068 68426369 -182261485 - AluSx SINE Alu -8 304 1 2392 105 0 10 chr2 68426702 68427016 -182260838 - AluSx SINE Alu -1 311 1 236 286 36 48 chr2 68428067 68428235 -182259619 + L2 LINE L2 2335 2500 -814 383 167 0 0 chr2 68428244 68428310 -182259544 + MIR SINE MIR 91 156 -106 837 118 0 8 chr2 68428318 68428437 -182259417 + FLAM_C SINE Alu 1 118 -15 201 272 87 39 chr2 68428440 68428543 -182259311 + MIR SINE MIR 132 239 -23 244 346 89 34 chr2 68428581 68428873 -182258981 + L2 LINE L2 2531 2838 -476 928 196 22 0 chr2 68429331 68429515 -182258339 - MER5A DNA MER1_type -1 188 1 2526 61 0 19 chr2 68431657 68431969 -182255885 + AluY SINE Alu 1 306 -5 652 226 55 12 chr2 68432033 68432254 -182255600 + MIR SINE MIR 30 261 -1 1644 211 93 56 chr2 68432944 68433427 -182254427 + MLT1D LTR MaLR 5 505 0 530 223 107 0 chr2 68433433 68433554 -182254300 + MLT1J LTR MaLR 62 195 -316 283 189 0 68 chr2 68433576 68433650 -182254204 - MLT1A2 LTR MaLR 0 365 297 2966 114 34 2 chr2 68433659 68434099 -182253755 - L1PA16 LINE L1 -4 6162 5709 511 197 42 78 chr2 68434103 68434245 -182253609 + MLT1D LTR MaLR 92 228 -277 588 170 0 28 chr2 68434307 68434413 -182253441 - L1PA16 LINE L1 -448 5718 5616 1204 167 199 28 chr2 68434413 68434695 -182253159 - MLT1A2 LTR MaLR -44 330 1 308 215 96 146 chr2 68434716 68434926 -182252928 + MLT1J LTR MaLR 241 437 -74 2329 78 14 3 chr2 68434926 68435219 -182252635 + AluSx SINE Alu 1 296 -16 308 215 96 146 chr2 68435219 68435269 -182252585 + MLT1J LTR MaLR 437 488 -23 1071 190 52 30 chr2 68437019 68437371 -182250483 - MSTD LTR MaLR 0 396 1 365 250 108 58 chr2 68437540 68437780 -182250074 + L1MC5 LINE L1 7609 7860 -101 240 180 0 20 chr2 68437844 68437894 -182249960 + MER103 DNA DNA 1 49 -117 677 265 11 0 chr2 68438201 68438382 -182249472 + MIR SINE MIR 66 248 -14 371 140 0 0 chr2 68438699 68438749 -182249105 - MLT1J LTR MaLR -367 144 95 423 0 0 0 chr2 68438767 68438814 -182249040 + (TCTA)n Simple_repeat Simple_repeat 1 47 0 261 268 62 10 chr2 68439818 68439915 -182247939 - L1MC4a LINE L1 -1878 5930 5829 993 251 48 101 chr2 68440021 68440546 -182247308 - L1MC4a LINE L1 -1976 5832 5336 278 140 20 0 chr2 68440520 68440570 -182247284 - L1MC4a LINE L1 -1310 4836 4786 * 305 304 88 0 chr2 68440621 68440723 -182247131 + MIR3 SINE MIR 45 155 -53 221 314 74 62 chr2 68440768 68441010 -182246844 - L2 LINE L2 -49 3223 2979 639 311 224 10 chr2 68441780 68442851 -182245003 - L2 LINE L2 -649 2665 1366 1310 128 20 0 chr2 68442967 68443163 -182244691 - AluJb SINE Alu -4 308 109 1596 143 49 38 chr2 68444972 68445259 -182242595 - AluJo SINE Alu -14 298 9 4175 91 9 0 chr2 68446547 68447094 -182240760 + MER41A LTR ERV1 1 552 -2 186 43 0 0 chr2 68447151 68447174 -182240680 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 308 172 17 0 chr2 68447372 68447430 -182240424 - MER91 DNA MER1_type -76 64 6 227 306 14 0 chr2 68447739 68447811 -182240043 - MIR3 SINE MIR -54 154 82 2048 162 147 41 chr2 68447953 68448220 -182239634 - MLT2B1 LTR ERVL 0 520 283 1051 32 25 19 chr2 68448220 68448377 -182239477 + (GAAA)n Simple_repeat Simple_repeat 2 159 0 2048 162 147 41 chr2 68448377 68448572 -182239282 - MLT2B1 LTR ERVL -237 283 9 238 186 35 58 chr2 68448831 68448906 -182238948 - L1ME4a LINE L1 -1 6120 6046 2383 91 0 3 chr2 68448906 68449215 -182238639 + AluSg SINE Alu 1 308 -2 24 0 0 0 chr2 68449264 68449288 -182238566 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr2 68449904 68449945 -182237909 + AT_rich Low_complexity Low_complexity 1 41 0 2295 106 0 7 chr2 68449966 68450267 -182237587 - AluSx SINE Alu -13 299 1 372 316 44 0 chr2 68450911 68451025 -182236829 + L2 LINE L2 3154 3272 0 930 129 14 0 chr2 68451571 68451718 -182236136 + FRAM SINE Alu 18 166 -10 544 281 28 6 chr2 68452044 68452222 -182235632 + MIR SINE MIR 21 202 -60 306 279 0 0 chr2 68452233 68452330 -182235524 + MLT1H1 LTR MaLR 14 153 -396 1690 194 42 60 chr2 68452336 68452784 -182235070 + MLT1D LTR MaLR 7 446 -59 1240 142 35 0 chr2 68452786 68452983 -182234871 - AluSg/x SINE Alu -13 297 94 643 231 217 24 chr2 68453026 68453369 -182234485 + MLT1H1 LTR MaLR 106 522 -8 23 0 0 0 chr2 68453434 68453457 -182234397 + AT_rich Low_complexity Low_complexity 1 23 0 666 188 0 31 chr2 68453458 68453586 -182234268 - FLAM_C SINE Alu -9 124 1 299 222 0 0 chr2 68453617 68453671 -182234183 + MIR SINE MIR 201 254 -8 2123 198 32 89 chr2 68453671 68453704 -182234150 + MLT2B3 LTR ERVL 1 34 -520 3402 104 122 29 chr2 68453704 68454262 -182233592 + LTR9 LTR ERV1 1 610 -2 2123 198 32 89 chr2 68454262 68454815 -182233039 + MLT2B3 LTR ERVL 34 554 0 704 206 24 0 chr2 68454844 68454970 -182232884 + Tigger3(Golem) DNA MER2_type 2 130 -2899 416 169 117 0 chr2 68455072 68455149 -182232705 + FAM SINE Alu 83 168 -17 1684 184 108 44 chr2 68455203 68455637 -182232217 - MLT1C LTR MaLR 0 467 6 1800 145 3 3 chr2 68455748 68456057 -182231797 + AluSx SINE Alu 1 309 0 1392 190 98 46 chr2 68456128 68456475 -182231379 + MLT1A1 LTR MaLR 1 365 0 1513 167 0 0 chr2 68456907 68457159 -182230695 + AluJo SINE Alu 37 288 -24 212 257 230 0 chr2 68457217 68457291 -182230563 - MIR SINE MIR -64 198 108 309 281 21 21 chr2 68457292 68457388 -182230466 + MLT1J2 LTR MaLR 1 96 -446 376 297 77 10 chr2 68458315 68458510 -182229344 + L1MC4a LINE L1 5721 5928 -1880 1878 144 0 3 chr2 68458523 68458814 -182229040 + AluJo SINE Alu 6 295 -17 586 200 85 0 chr2 68458991 68459121 -182228733 + L1ME3A LINE L1 6021 6161 -9 180 0 0 0 chr2 68459128 68459148 -182228706 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 503 303 48 0 chr2 68459806 68459971 -182227883 - MIR SINE MIR -12 250 78 586 226 165 60 chr2 68459974 68460402 -182227452 - MLT1G3 LTR MaLR -30 525 21 843 65 0 0 chr2 68460402 68460509 -182227345 - AluSp/q SINE Alu -15 298 192 255 235 0 20 chr2 68460581 68460632 -182227222 - MIR SINE MIR -178 84 35 847 250 100 88 chr2 68461413 68461945 -182225909 + MER34 LTR ERV1 1 538 -4 193 305 0 0 chr2 68461957 68462016 -182225838 - L2 LINE L2 -1 3271 3213 2057 138 0 0 chr2 68462174 68462479 -182225375 + AluSx SINE Alu 1 305 -7 1796 168 0 0 chr2 68463002 68463294 -182224560 + 7SLRNA srpRNA srpRNA 1 292 -28 2136 82 4 0 chr2 68463314 68463593 -182224261 - AluSx SINE Alu -32 280 1 21 36 0 0 chr2 68463691 68463719 -182224135 + AT_rich Low_complexity Low_complexity 1 28 0 1933 128 14 0 chr2 68463886 68464182 -182223672 + AluSx SINE Alu 1 300 -12 181 279 213 0 chr2 68464890 68464951 -182222903 + MIR SINE MIR 189 262 0 696 256 29 24 chr2 68465206 68465495 -182222359 + MLT1J2 LTR MaLR 90 427 -23 221 317 82 49 chr2 68465742 68465925 -182221929 - MIR3 SINE MIR -1 207 19 542 350 9 36 chr2 68465942 68466165 -182221689 + MIR SINE MIR 2 218 -44 1443 183 14 30 chr2 68466167 68466462 -182221392 + AluJo SINE Alu 1 290 -22 2542 199 67 39 chr2 68466950 68467026 -182220828 + LTR48B LTR ERV1 1 73 -571 2203 90 13 7 chr2 68467026 68467336 -182220518 - AluSp SINE Alu 0 313 2 2542 199 67 39 chr2 68467336 68467882 -182219972 + LTR48B LTR ERV1 73 641 -3 2555 141 14 30 chr2 68467882 68468315 -182219539 + MSTB LTR MaLR 1 426 0 712 192 0 8 chr2 68469307 68469437 -182218417 - FLAM_A SINE Alu -4 129 1 3557 127 75 0 chr2 68469869 68470460 -182217394 + LTR24C LTR ERV1 1 635 0 2787 130 11 75 chr2 68470518 68471050 -182216804 + L1MB3 LINE L1 5671 6168 -15 387 60 0 0 chr2 68471052 68471102 -182216752 + (CA)n Simple_repeat Simple_repeat 1 50 0 2105 196 38 68 chr2 68471511 68472089 -182215765 + MER34B LTR ERV1 5 565 0 259 240 19 0 chr2 68472129 68472233 -182215621 + (TA)n Simple_repeat Simple_repeat 1 106 0 656 252 0 0 chr2 68472242 68472402 -182215452 + L1ME3 LINE L1 6005 6161 -1 418 264 16 54 chr2 68472403 68472532 -182215322 - MER5B DNA MER1_type -54 124 1 1350 184 79 79 chr2 68473711 68474091 -182213763 + MER113 DNA MER1_type? 8 387 -134 2697 132 28 12 chr2 68474193 68474618 -182213236 + MSTB1 LTR MaLR 1 432 0 207 291 13 25 chr2 68474642 68474721 -182213133 + CT-rich Low_complexity Low_complexity 3 80 0 716 181 135 59 chr2 68475164 68475467 -182212387 - LTR37A LTR ERV1 -20 406 81 808 131 7 36 chr2 68475473 68475610 -182212244 + FLAM_C SINE Alu 1 133 0 805 145 5 4 chr2 68475628 68475889 -182211965 + AluJ SINE Alu 2 228 -84 286 279 0 13 chr2 68475892 68475971 -182211883 - LTR37A LTR ERV1 -348 78 1 262 282 114 54 chr2 68476124 68476273 -182211581 + MIR3 SINE MIR 43 200 -8 2089 90 40 3 chr2 68476450 68476751 -182211103 - AluSx SINE Alu 0 312 1 1181 91 152 0 chr2 68477800 68477998 -182209856 - MER30 DNA MER1_type -2 228 1 215 276 61 50 chr2 68478132 68478313 -182209541 - L2 LINE L2 -669 2645 2463 350 257 169 22 chr2 68478456 68478592 -182209262 + MIR SINE MIR 14 169 -93 916 241 31 9 chr2 68478722 68478946 -182208908 - MIR SINE MIR -26 236 8 207 347 28 0 chr2 68478962 68479034 -182208820 - L2 LINE L2 -1030 2284 2211 728 109 0 0 chr2 68479681 68479782 -182208072 - HY3 scRNA scRNA 0 101 1 367 284 9 26 chr2 68479962 68480078 -182207776 - MER81 DNA DNA 0 114 1 1011 257 112 89 chr2 68480368 68480834 -182207020 - MLT1L LTR MaLR -5 610 125 2097 117 3 0 chr2 68480834 68481133 -182206721 - AluSx SINE Alu -4 308 9 1011 257 112 89 chr2 68481133 68481262 -182206592 - MLT1L LTR MaLR -490 125 1 233 276 76 67 chr2 68481690 68481795 -182206059 + L2 LINE L2 3201 3306 -7 221 200 67 0 chr2 68482420 68482465 -182205389 - L2 LINE L2 -2 3270 3223 941 118 0 0 chr2 68483145 68483280 -182204574 + AluSq/x SINE Alu 1 135 -177 2182 107 10 0 chr2 68483280 68483588 -182204266 + AluSq SINE Alu 1 311 -2 216 200 0 0 chr2 68483588 68483633 -182204221 + GA-rich Low_complexity Low_complexity 2 46 0 879 146 6 13 chr2 68484018 68484176 -182203678 - FRAM SINE Alu -9 167 11 2147 106 0 7 chr2 68484949 68485250 -182202604 + AluSx SINE Alu 1 299 -13 292 291 91 18 chr2 68485357 68485467 -182202387 + MIR SINE MIR 34 151 -111 379 237 0 0 chr2 68485471 68485547 -182202307 + HsTC2 DNA Tc2 3 78 -1820 949 259 88 9 chr2 68485611 68485937 -182201917 + MLT1I LTR MaLR 81 407 -2 276 198 89 69 chr2 68485937 68486033 -182201821 + HsTC2 DNA Tc2 1801 1898 0 326 261 0 0 chr2 68486050 68486119 -182201735 + MIR SINE MIR 194 262 0 2507 136 46 80 chr2 68486235 68486670 -182201184 - LTR54 LTR ERV1 -4 506 90 1997 106 53 0 chr2 68486670 68486952 -182200902 - AluSp SINE Alu -16 297 1 2507 136 46 80 chr2 68486952 68487040 -182200814 - LTR54 LTR ERV1 -420 90 1 238 260 55 0 chr2 68488043 68488116 -182199738 - MLT1J LTR MaLR 0 511 435 1986 98 0 28 chr2 68488118 68488404 -182199450 + AluSq SINE Alu 1 278 -35 207 0 0 0 chr2 68488405 68488428 -182199426 + (TC)n Simple_repeat Simple_repeat 2 24 0 432 119 86 0 chr2 68488431 68488816 -182199038 + (TA)n Simple_repeat Simple_repeat 1 418 0 314 164 60 15 chr2 68488817 68488884 -182198970 - L1MCa LINE L1 -4362 2064 1995 319 185 69 0 chr2 68488889 68489304 -182198550 + (TA)n Simple_repeat Simple_repeat 1 443 0 335 231 44 22 chr2 68489313 68489404 -182198450 - L1MC4 LINE L1 -1338 6704 6612 * 343 182 68 34 chr2 68489331 68489419 -182198435 + L1MC4 LINE L1 6614 6704 -1338 329 144 89 67 chr2 68489391 68489481 -182198373 + L1MCa LINE L1 1972 2063 -4363 * 309 132 73 59 chr2 68489506 68489574 -182198280 + L1MCa LINE L1 1995 2063 -4363 227 73 73 0 chr2 68489574 68489629 -182198225 + (TA)n Simple_repeat Simple_repeat 2 60 0 317 145 118 53 chr2 68489630 68489706 -182198148 + L1MCa LINE L1 1995 2075 -4351 45 45 0 0 chr2 68489711 68489777 -182198077 + AT_rich Low_complexity Low_complexity 1 66 0 747 249 130 59 chr2 68489780 68490189 -182197665 - MLT1J LTR MaLR -71 440 3 287 186 0 0 chr2 68490459 68490502 -182197352 + MER66A LTR ERV1 295 337 -141 1906 128 3 24 chr2 68490610 68490944 -182196910 + AluJo SINE Alu 1 328 0 561 333 72 22 chr2 68491224 68491542 -182196312 + L2 LINE L2 2916 3249 -23 751 239 141 0 chr2 68491559 68491743 -182196111 + MIR SINE MIR 2 211 -51 196 250 23 68 chr2 68492250 68492338 -182195516 - MIR SINE MIR -75 133 50 353 293 114 0 chr2 68492345 68492485 -182195369 - L2 LINE L2 0 3313 3158 780 178 50 50 chr2 68492490 68492670 -182195184 + MER104 DNA MER2_type 1 180 0 609 219 55 38 chr2 68492949 68493132 -182194722 - MLT1J LTR MaLR -116 395 210 925 251 153 10 chr2 68494018 68494325 -182193529 + MLT1H LTR MaLR 2 352 -197 471 168 53 11 chr2 68494364 68494459 -182193395 + MLT1H LTR MaLR 449 547 -2 2143 113 3 0 chr2 68495837 68496147 -182191707 - AluSq SINE Alu -2 311 1 2139 114 16 0 chr2 68496687 68496993 -182190861 + AluSx SINE Alu 1 311 -1 727 178 34 0 chr2 68497282 68497400 -182190454 + FLAM_A SINE Alu 1 122 -11 1344 181 106 15 chr2 68497548 68497813 -182190041 - MLT1F LTR MaLR 0 542 254 24 0 0 0 chr2 68497821 68497845 -182190009 + AT_rich Low_complexity Low_complexity 1 24 0 243 0 0 0 chr2 68498847 68498874 -182188980 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 1645 173 7 0 chr2 68498875 68499146 -182188708 - AluJb SINE Alu -39 273 1 2852 165 16 46 chr2 68499243 68499813 -182188041 + L1MB5 LINE L1 5603 6155 -19 2178 114 3 0 chr2 68499831 68500139 -182187715 + AluSx SINE Alu 3 311 -1 466 122 171 0 chr2 68500167 68500249 -182187605 - FLAM_A SINE Alu -3 139 44 357 223 11 53 chr2 68500393 68500487 -182187367 - MLT1K LTR MaLR -81 507 418 304 272 103 36 chr2 68501003 68501198 -182186656 + L1ME4a LINE L1 5561 5768 -353 1279 225 63 33 chr2 68501198 68501340 -182186514 + AluJo SINE Alu 1 137 -175 2393 107 7 0 chr2 68501340 68501650 -182186204 + AluSx SINE Alu 1 312 0 1279 225 63 33 chr2 68501650 68501809 -182186045 + AluJo SINE Alu 137 311 -1 22 35 0 0 chr2 68501909 68501938 -182185916 + AT_rich Low_complexity Low_complexity 1 29 0 36 53 0 13 chr2 68501980 68502000 -182185854 + AT_rich Low_complexity Low_complexity 1 20 -54 2260 93 7 0 chr2 68502000 68502289 -182185565 + AluSx SINE Alu 1 291 -21 36 53 0 13 chr2 68502289 68502343 -182185511 + AT_rich Low_complexity Low_complexity 20 74 0 445 258 66 0 chr2 68502815 68502982 -182184872 + L1ME4a LINE L1 5937 6114 -7 190 303 76 8 chr2 68505183 68505302 -182182552 - MIR3 SINE MIR -53 155 29 21 0 0 0 chr2 68505406 68505427 -182182427 + GC_rich Low_complexity Low_complexity 1 21 0 376 301 106 10 chr2 68506140 68506339 -182181515 + L2 LINE L2 304 521 -2793 1245 156 64 79 chr2 68506347 68506672 -182181182 + L1MC1 LINE L1 6026 7785 0 2421 328 113 13 chr2 68506683 68507980 -182179874 + L2 LINE L2 566 1991 -1323 672 268 49 53 chr2 68508018 68508457 -182179397 + MLT1H LTR MaLR 41 549 0 968 296 256 4 chr2 68508458 68509295 -182178559 + L2 LINE L2 1988 3075 -238 207 189 0 0 chr2 68509307 68509344 -182178510 + (CA)n Simple_repeat Simple_repeat 1 37 0 656 179 8 30 chr2 68509376 68509510 -182178344 - FLAM_C SINE Alu 0 143 13 496 278 48 0 chr2 68509521 68509647 -182178207 + L2 LINE L2 3180 3311 -2 477 0 0 0 chr2 68510251 68510304 -182177550 + (CA)n Simple_repeat Simple_repeat 2 54 0 34 55 0 0 chr2 68511329 68511384 -182176470 + GC_rich Low_complexity Low_complexity 1 55 0 1218 205 103 71 chr2 68512493 68512957 -182174897 - MLT1H LTR MaLR 0 549 71 823 212 159 9 chr2 68513071 68513297 -182174557 + MIR SINE MIR 2 261 -1 1640 127 0 8 chr2 68513498 68513734 -182174120 + AluJb SINE Alu 60 293 -19 289 320 80 16 chr2 68513776 68513901 -182173953 + MIR SINE MIR 28 160 -102 270 290 97 62 chr2 68514128 68514273 -182173581 + L2 LINE L2 3164 3313 0 180 192 308 0 chr2 68514411 68514489 -182173365 - MER5B DNA MER1_type -2 176 75 1942 155 0 3 chr2 68515777 68516067 -182171787 - AluJb SINE Alu -23 289 1 213 288 32 72 chr2 68516154 68516279 -182171575 + MER5A DNA MER1_type 11 130 -59 584 233 0 8 chr2 68516284 68516404 -182171450 - FLAM_A SINE Alu -10 132 14 302 259 210 10 chr2 68516509 68516649 -182171205 + MER5B DNA MER1_type 1 179 -10 1841 116 0 103 chr2 68516808 68517137 -182170717 - AluJb SINE Alu -17 295 1 1175 155 127 35 chr2 68517555 68517871 -182169983 + Charlie1b DNA MER1_type 54 398 -125 2285 121 0 0 chr2 68517873 68518180 -182169674 - AluSx SINE Alu -5 307 1 806 143 8 15 chr2 68518214 68518347 -182169507 - FLAM_A SINE Alu -4 138 7 2112 95 29 0 chr2 68518357 68518661 -182169193 - AluSg SINE Alu 0 312 1 1188 114 75 30 chr2 68518663 68518864 -182168990 - AluSg/x SINE Alu -19 293 84 636 182 0 38 chr2 68518864 68518996 -182168858 + Charlie1b DNA MER1_type 397 523 0 871 139 0 0 chr2 68519506 68519628 -182168226 + FLAM_C SINE Alu 3 124 -19 339 85 0 0 chr2 68520420 68520467 -182167387 + (TCCC)n Simple_repeat Simple_repeat 2 48 0 281 48 48 0 chr2 68520466 68520508 -182167346 + (TTTC)n Simple_repeat Simple_repeat 2 45 0 * 326 207 0 0 chr2 68520525 68520586 -182167268 - FRAM/FAM SINE Alu -97 69 16 25 0 0 0 chr2 68520776 68520801 -182167053 + AT_rich Low_complexity Low_complexity 1 25 0 703 178 158 0 chr2 68522422 68522574 -182165280 - AluJo SINE Alu -19 293 118 2250 149 28 101 chr2 68522574 68522687 -182165167 - L1MB3 LINE L1 -11 6172 6052 2234 119 0 3 chr2 68522687 68522980 -182164874 - AluSx SINE Alu -15 297 6 2250 149 28 101 chr2 68522980 68523208 -182164646 - L1MB3 LINE L1 -131 6052 5885 2182 167 34 86 chr2 68523208 68523317 -182164537 - LTR54 LTR ERV1 0 510 397 2443 91 3 0 chr2 68523317 68523625 -182164229 + AluSx SINE Alu 1 309 -3 2182 167 34 86 chr2 68523625 68524053 -182163801 - LTR54 LTR ERV1 -113 397 1 2250 149 28 101 chr2 68524053 68524274 -182163580 - L1MB3 LINE L1 -298 5885 5650 237 299 177 53 chr2 68525047 68525442 -182162412 - L2 LINE L2 -525 2789 2346 705 237 170 16 chr2 68525468 68525662 -182162192 - MIR SINE MIR -4 258 35 2617 165 31 50 chr2 68526191 68526731 -182161123 + LTR26B LTR ERV1 1 530 -1 636 110 48 123 chr2 68527002 68527148 -182160706 - MER44D DNA MER2_type -196 413 9 337 312 37 9 chr2 68527165 68527274 -182160580 + L2 LINE L2 3141 3252 -20 269 297 67 86 chr2 68527414 68527623 -182160231 - L2 LINE L2 -14 3258 3054 521 183 6 40 chr2 68527704 68527747 -182160107 - L1MB7 LINE L1 -6 6177 6134 1625 166 28 25 chr2 68527747 68528031 -182159823 + AluJb SINE Alu 1 285 -27 521 183 6 40 chr2 68528031 68528142 -182159712 - L1MB7 LINE L1 -49 6134 6033 2442 87 0 0 chr2 68528926 68529225 -182158629 - AluSc SINE Alu -10 299 1 1829 141 27 57 chr2 68529294 68529346 -182158508 - L1MB7 LINE L1 -19 6165 6113 1541 163 43 25 chr2 68529346 68529622 -182158232 + AluJb SINE Alu 1 281 -31 207 0 0 0 chr2 68529622 68529645 -182158209 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 1829 141 27 57 chr2 68529645 68529758 -182158096 - L1MB7 LINE L1 -70 6114 5999 1291 189 15 118 chr2 68529758 68529828 -182158026 - MLT1A1 LTR MaLR 0 365 289 2211 118 16 0 chr2 68529828 68530134 -182157720 - AluSp SINE Alu -2 311 1 1291 189 15 118 chr2 68530134 68530304 -182157550 - MLT1A1 LTR MaLR -76 289 181 1932 158 0 42 chr2 68530304 68530470 -182157384 - AluJb SINE Alu -15 297 148 2201 135 0 0 chr2 68530470 68530782 -182157072 - AluSx SINE Alu 0 312 1 1932 158 0 42 chr2 68530782 68530925 -182156929 - AluJb SINE Alu -164 148 1 1291 189 15 118 chr2 68530925 68531090 -182156764 - MLT1A1 LTR MaLR -184 181 1 1829 141 27 57 chr2 68531090 68531290 -182156564 - L1MB7 LINE L1 -185 5999 5809 1315 148 135 12 chr2 68531290 68531646 -182156208 - LTR47A LTR ERVL 0 452 1 1158 161 125 61 chr2 68531676 68532005 -182155849 - L1MB7 LINE L1 -398 5780 5431 351 209 90 61 chr2 68532206 68532335 -182155519 + MIR SINE MIR 35 169 -39 313 197 15 0 chr2 68532337 68532403 -182155451 + HsTC2 DNA Tc2 4 70 -1828 1363 249 37 10 chr2 68532460 68532866 -182154988 + HsTC2 DNA Tc2 1283 1875 -23 652 178 17 35 chr2 68533036 68533252 -182154602 - LTR2 LTR ERV1 0 490 267 384 256 18 79 chr2 68533255 68533419 -182154435 - LTR2 LTR ERV1 -295 154 1 379 203 0 0 chr2 68533419 68533493 -182154361 - Harlequin LTR ERV1 -1 6895 6822 361 197 0 0 chr2 68533489 68533550 -182154304 - Harlequin LTR ERV1 -1369 5527 5467 * 2909 188 30 0 chr2 68533546 68534073 -182153781 - HERVE LTR ERV1 -1802 6011 5469 * 16487 141 2 14 chr2 68534062 68536648 -182151206 - HERVE LTR ERV1 -2717 5096 2541 38771 64 18 5 chr2 68536648 68542725 -182145129 + L1PA5 LINE L1 5 6161 0 9958 203 40 43 chr2 68542726 68545290 -182142564 - HERVE LTR ERV1 -5258 2555 1 514 137 68 171 chr2 68545290 68545495 -182142359 - LTR2 LTR ERV1 0 449 266 456 231 24 77 chr2 68545491 68545660 -182142194 - LTR2 LTR ERV1 -289 160 1 * 1945 166 0 0 chr2 68545790 68546085 -182141769 + AluJo SINE Alu 1 295 -17 2313 119 0 0 chr2 68546129 68546432 -182141422 - AluSx SINE Alu -9 303 1 604 180 0 9 chr2 68546647 68546758 -182141096 - MER63A DNA MER1_type -44 166 57 240 226 78 69 chr2 68597843 68597945 -182089909 - MER5A DNA MER1_type 0 189 87 297 65 32 48 chr2 68597956 68598018 -182089836 + (TTTC)n Simple_repeat Simple_repeat 4 64 0 2240 115 10 10 chr2 68598024 68598336 -182089518 - AluSp SINE Alu -1 312 1 586 81 0 0 chr2 68598337 68598411 -182089443 - MER5A DNA MER1_type -113 76 3 282 298 157 0 chr2 68598528 68598649 -182089205 + L2 LINE L2 2919 3058 -214 275 280 136 0 chr2 68600237 68600355 -182087499 - Charlie8 DNA MER1_type -2169 248 115 708 291 108 5 chr2 68601621 68601834 -182086020 + MIR SINE MIR 14 248 -14 1681 197 95 97 chr2 68601848 68602488 -182085366 - LTR48B LTR ERV1 -5 639 1 22 43 0 21 chr2 68602638 68602666 -182085188 + AT_rich Low_complexity Low_complexity 1 29 -17 1559 189 84 7 chr2 68602666 68602963 -182084891 - 7SLRNA srpRNA srpRNA 0 320 1 22 43 0 21 chr2 68602963 68602981 -182084873 + AT_rich Low_complexity Low_complexity 29 46 0 305 350 101 7 chr2 68603203 68603480 -182084374 + L2 LINE L2 1372 1674 -1640 195 234 64 0 chr2 68603643 68603690 -182084164 - L3 LINE CR1 -121 1456 1407 388 218 23 11 chr2 68603800 68603887 -182083967 - MLT1J LTR MaLR -331 180 93 1117 139 23 6 chr2 68603895 68604068 -182083786 + MSTB LTR MaLR 1 176 -250 565 99 0 0 chr2 68604084 68604165 -182083689 + MSTB LTR MaLR 348 428 0 191 344 0 0 chr2 68604252 68604342 -182083512 + L2 LINE L2 1730 1819 -1495 434 210 40 0 chr2 68604411 68604511 -182083343 - U13 snRNA snRNA 0 104 1 2176 110 0 7 chr2 68604922 68605230 -182082624 - AluSx SINE Alu -6 306 1 2123 105 0 3 chr2 68605401 68605695 -182082159 + AluSq SINE Alu 9 301 -12 419 238 68 75 chr2 68605722 68605869 -182081985 + MIR SINE MIR 32 177 -85 238 296 155 21 chr2 68606107 68606249 -182081605 - MLT1K LTR MaLR -328 260 100 684 251 47 33 chr2 68606320 68606657 -182081197 - LTR35 LTR ERV1 0 677 350 324 253 48 0 chr2 68607123 68607206 -182080648 + ORSL DNA AcHobo 1 87 -188 1154 201 87 121 chr2 68607260 68607604 -182080250 + MER39 LTR ERV1 67 591 -116 1834 155 3 16 chr2 68607604 68607920 -182079934 - AluJo SINE Alu 0 312 1 1154 201 87 121 chr2 68607920 68608033 -182079821 + MER39 LTR ERV1 591 706 -1 518 209 194 0 chr2 68608041 68608170 -182079684 + ORSL DNA AcHobo 122 275 0 753 155 0 23 chr2 68608587 68608716 -182079138 + FLAM_C SINE Alu 2 127 -6 1141 281 70 16 chr2 68608733 68609107 -182078747 - MLT1I LTR MaLR -15 394 1 351 0 0 0 chr2 68609672 68609711 -182078143 + (TG)n Simple_repeat Simple_repeat 2 40 0 1368 111 0 55 chr2 68610226 68610443 -182077411 + AluSg/x SINE Alu 81 285 -27 453 228 109 70 chr2 68610673 68610948 -182076906 + MLT1F1 LTR MaLR 36 365 -202 598 146 0 0 chr2 68610971 68611060 -182076794 + FRAM SINE Alu 22 110 -66 652 203 12 133 chr2 68611067 68611308 -182076546 + MLT1F1 LTR MaLR 356 567 0 1008 186 0 0 chr2 68611762 68611939 -182075915 - AluJb SINE Alu 0 312 136 387 240 50 10 chr2 68612046 68612146 -182075708 + MIR3 SINE MIR 66 169 -39 886 204 41 0 chr2 68612245 68612441 -182075413 - MER3 DNA MER1_type -1 208 5 438 194 150 139 chr2 68612458 68612529 -182075325 + MER5A DNA MER1_type 8 77 -112 2305 109 0 0 chr2 68612529 68612842 -182075012 + AluSq SINE Alu 1 313 0 438 194 150 139 chr2 68612842 68612950 -182074904 + MER5A DNA MER1_type 77 189 0 2130 108 0 7 chr2 68613017 68613322 -182074532 + AluJb SINE Alu 1 303 -9 541 280 126 28 chr2 68613326 68613540 -182074314 + MIR SINE MIR 28 262 0 1771 144 7 3 chr2 68614099 68614384 -182073470 - AluJb SINE Alu -26 286 1 702 209 95 13 chr2 68614414 68614572 -182073282 - MER5A DNA MER1_type -6 183 13 1702 153 27 7 chr2 68615790 68616084 -182071770 - AluJb SINE Alu -12 300 1 2333 75 3 0 chr2 68616093 68616398 -182071456 - AluY SINE Alu -5 306 1 1843 172 30 25 chr2 68616630 68617025 -182070829 + L1ME1 LINE L1 5537 5933 -233 1035 162 0 27 chr2 68617025 68617210 -182070644 + FRAM SINE Alu 1 173 -3 339 314 39 20 chr2 68617239 68617392 -182070462 - L1ME4a LINE L1 -87 6034 5879 801 163 7 7 chr2 68617538 68617673 -182070181 + AluJ SINE Alu 2 136 -176 58 60 0 0 chr2 68617674 68617774 -182070080 + AT_rich Low_complexity Low_complexity 1 100 0 964 168 65 0 chr2 68617774 68617959 -182069895 + AluJ SINE Alu 116 312 0 671 167 8 0 chr2 68617982 68618102 -182069752 + FRAM SINE Alu 56 176 0 310 239 37 19 chr2 68618405 68618516 -182069338 + MIR SINE MIR 2 113 -104 192 176 40 176 chr2 68619284 68619409 -182068445 + MIR SINE MIR 25 132 -76 2266 104 0 0 chr2 68619587 68619896 -182067958 - AluSx SINE Alu -3 309 1 256 257 14 14 chr2 68620076 68620150 -182067704 - LTR67 LTR ERVL -26 531 458 1497 174 14 4 chr2 68620686 68620961 -182066893 - AluJb SINE Alu -34 278 1 447 55 0 0 chr2 68620962 68621017 -182066837 - MST-int LTR MaLR -308 1343 1289 808 156 19 32 chr2 68621020 68621174 -182066680 + MER20 DNA MER1_type 68 219 0 559 108 0 12 chr2 68621509 68621592 -182066262 + MSTA LTR MaLR 1 82 -346 341 128 0 0 chr2 68621613 68621660 -182066194 + MSTA LTR MaLR 382 428 0 4438 171 28 1 chr2 68621660 68622412 -182065442 + MSTA-int LTR MaLR 1 772 -879 2747 92 2 40 chr2 68622413 68622499 -182065355 + MSTA-int LTR MaLR 1194 1282 -298 1646 167 17 0 chr2 68622499 68622792 -182065062 + AluJb SINE Alu 1 298 -14 2747 92 2 40 chr2 68622792 68623107 -182064747 + MSTA-int LTR MaLR 1282 1580 0 1987 147 124 21 chr2 68623107 68623495 -182064359 + MSTA LTR MaLR 1 428 0 800 182 8 0 chr2 68623805 68623937 -182063917 - AluJo SINE Alu -178 134 2 362 297 30 0 chr2 68624086 68624187 -182063667 - MIR SINE MIR -82 180 77 460 134 0 49 chr2 68624260 68624342 -182063512 - AluS SINE Alu -234 79 2 490 138 12 25 chr2 68624376 68624456 -182063398 - FRAM SINE Alu -30 146 68 2936 213 30 60 chr2 68625409 68626294 -182061560 - L1ME1 LINE L1 0 6178 5329 655 255 152 11 chr2 68626423 68626607 -182061247 - MIR SINE MIR 0 262 53 657 180 18 0 chr2 68627200 68627311 -182060543 - MER81 DNA DNA -1 113 1 1524 206 27 35 chr2 68627546 68627914 -182059940 - MLT1A1 LTR MaLR 0 365 1 233 266 110 58 chr2 68628189 68628343 -182059511 - MLT1K LTR MaLR -113 475 314 222 261 31 46 chr2 68628444 68628509 -182059345 + MER91A DNA MER1_type 1 64 -76 266 302 85 8 chr2 68628511 68628640 -182059214 + MIR3 SINE MIR 67 205 -3 273 329 111 46 chr2 68628868 68629121 -182058733 - MIR SINE MIR -1 261 2 40 49 0 0 chr2 68629236 68629297 -182058557 + AT_rich Low_complexity Low_complexity 1 61 0 2189 106 0 0 chr2 68629338 68629631 -182058223 + AluSc SINE Alu 1 293 -16 1109 227 73 78 chr2 68630373 68630783 -182057071 + MLT1I LTR MaLR 2 409 0 536 313 74 9 chr2 68630943 68631173 -182056681 + MIR SINE MIR 1 245 -17 223 236 73 0 chr2 68631285 68631340 -182056514 - L3 LINE CR1 -281 1296 1238 3798 159 32 32 chr2 68631378 68631572 -182056282 + L1MB7 LINE L1 5424 5617 -567 2769 134 19 2 chr2 68631572 68631991 -182055863 + MSTB LTR MaLR 1 426 0 3798 159 32 32 chr2 68631991 68632538 -182055316 + L1MB7 LINE L1 5616 6165 -19 325 237 353 0 chr2 68633087 68633226 -182054628 + MER5A DNA MER1_type 1 188 -1 1515 124 40 4 chr2 68633226 68633476 -182054378 + AluSx SINE Alu 45 303 -9 312 333 50 28 chr2 68633559 68633739 -182054115 + MLT1J LTR MaLR 316 499 -12 227 270 79 0 chr2 68634043 68634106 -182053748 - MLT1L LTR MaLR -80 535 468 2094 120 7 0 chr2 68634119 68634427 -182053427 - AluSq SINE Alu -3 310 1 359 291 155 0 chr2 68634448 68634551 -182053303 - L2 LINE L2 0 3313 3195 335 317 0 0 chr2 68634551 68634693 -182053161 + (TG)n Simple_repeat Simple_repeat 1 142 0 920 300 53 14 chr2 68634695 68635194 -182052660 - L2 LINE L2 -145 3168 2655 307 250 52 43 chr2 68635197 68635313 -182052541 - MLT1L LTR MaLR -169 446 330 427 334 107 31 chr2 68635330 68635779 -182052075 + L2 LINE L2 1181 1663 -1651 332 184 2 0 chr2 68635805 68635869 -182051985 + L1MB5 LINE L1 5860 5924 -246 473 184 211 0 chr2 68635890 68635999 -182051855 - FLAM_C SINE Alu -10 133 2 1367 133 47 51 chr2 68636002 68636220 -182051634 + L1MB5 LINE L1 5913 6130 -44 1809 138 0 11 chr2 68636220 68636503 -182051351 + AluSx SINE Alu 1 280 -32 305 24 24 0 chr2 68636505 68636547 -182051307 + (CATAA)n Simple_repeat Simple_repeat 2 44 0 1367 133 47 51 chr2 68636547 68636580 -182051274 + L1MB5 LINE L1 6131 6166 -8 198 250 278 0 chr2 68636618 68636690 -182051164 + L2 LINE L2 2325 2416 -898 500 324 67 0 chr2 68636693 68636872 -182050982 + MER91A DNA MER1_type 1 191 -5 253 241 144 86 chr2 68636878 68637065 -182050789 + L2 LINE L2 2412 2609 -705 240 35 0 0 chr2 68637462 68637491 -182050363 + (TAA)n Simple_repeat Simple_repeat 2 30 0 516 322 19 19 chr2 68637536 68637744 -182050110 + L2 LINE L2 2667 2874 -440 1188 267 49 3 chr2 68637749 68638075 -182049779 + LTR16B LTR ERVL 4 344 -120 342 290 14 65 chr2 68638155 68638293 -182049561 + L2 LINE L2 2908 3038 -234 * 833 306 18 68 chr2 68638285 68638668 -182049186 - L2 LINE L2 -1 3312 2949 373 305 42 8 chr2 68638944 68639062 -182048792 - MIR SINE MIR 0 262 141 187 268 54 0 chr2 68639108 68639164 -182048690 - MIR SINE MIR -133 129 71 1391 143 0 70 chr2 68639182 68639441 -182048413 + AluJo SINE Alu 1 241 -71 189 322 111 11 chr2 68639502 68639592 -182048262 - MIR3 SINE MIR -11 197 99 458 222 0 0 chr2 68640021 68640111 -182047743 - MIR3 SINE MIR -54 154 65 216 0 0 0 chr2 68640298 68640322 -182047532 + (CTCTG)n Simple_repeat Simple_repeat 2 25 0 203 387 64 0 chr2 68640343 68640516 -182047338 + L2 LINE L2 2702 2885 -429 214 236 167 14 chr2 68640522 68640594 -182047260 + MIR SINE MIR 159 241 -21 180 152 0 0 chr2 68641222 68641255 -182046599 + (TCCA)n Simple_repeat Simple_repeat 4 36 0 318 277 28 78 chr2 68641910 68642051 -182045803 - HAL1b LINE L1 -11 1337 1204 225 0 0 0 chr2 68642793 68642818 -182045036 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 188 302 57 0 chr2 68642967 68643020 -182044834 + L3 LINE CR1 1519 1574 -3 437 245 38 0 chr2 68643038 68643144 -182044710 - L2 LINE L2 0 3313 3204 207 100 0 0 chr2 68644246 68644276 -182043578 + (A)n Simple_repeat Simple_repeat 1 30 0 569 155 0 58 chr2 68644325 68644428 -182043426 + AluJ/FLAM SINE Alu 5 101 -211 39 22 0 0 chr2 68644434 68644480 -182043374 + AT_rich Low_complexity Low_complexity 1 46 0 890 187 10 79 chr2 68644599 68644680 -182043174 + MER5A DNA MER1_type 1 86 -103 1842 149 0 26 chr2 68644680 68644989 -182042865 + AluJb SINE Alu 5 305 -7 890 187 10 79 chr2 68644989 68645110 -182042744 + MER5A DNA MER1_type 86 189 0 2158 96 7 0 chr2 68645391 68645411 -182042443 - AluSq SINE Alu -10 303 285 360 0 0 0 chr2 68645411 68645451 -182042403 + (TG)n Simple_repeat Simple_repeat 1 40 0 2158 96 7 0 chr2 68645451 68645731 -182042123 - AluSq SINE Alu -28 285 1 2157 111 0 7 chr2 68646610 68646908 -182040946 + AluSx SINE Alu 1 296 -16 401 59 118 0 chr2 68646913 68646981 -182040873 + L1MB1 LINE L1 6091 6166 -2 233 226 48 0 chr2 68648788 68648850 -182039004 + MLT1K LTR MaLR 519 583 -5 517 172 41 7 chr2 68648904 68649021 -182038833 - L1MB3 LINE L1 -3 6177 6049 1258 142 18 18 chr2 68649021 68649247 -182038607 - AluJo SINE Alu 0 312 87 929 271 113 10 chr2 68649706 68649998 -182037856 - MLT1I LTR MaLR -3 406 85 682 265 45 40 chr2 68650123 68650339 -182037515 - L2 LINE L2 -1 3312 3096 267 245 0 0 chr2 68650339 68650392 -182037462 + MIR SINE MIR 3 55 -207 887 140 56 39 chr2 68650399 68650526 -182037328 + MER53 DNA DNA 1 133 -56 2169 81 10 32 chr2 68650526 68650835 -182037019 + AluSc SINE Alu 1 302 -7 887 140 56 39 chr2 68650835 68650886 -182036968 + MER53 DNA DNA 133 182 -7 899 220 19 48 chr2 68650911 68651120 -182036734 + MIR SINE MIR 60 262 0 23 0 0 0 chr2 68651264 68651287 -182036567 + AT_rich Low_complexity Low_complexity 1 23 0 557 210 76 25 chr2 68651404 68651575 -182036279 + MLT1J LTR MaLR 45 287 -310 1305 282 48 42 chr2 68651936 68652016 -182035838 - Tigger8 DNA MER2_type -95 571 493 1705 196 14 81 chr2 68652016 68652140 -182035714 + MLT2D LTR ERVL 1 132 -282 1987 139 0 0 chr2 68652140 68652434 -182035420 - AluSx SINE Alu -18 294 1 1705 196 14 81 chr2 68652434 68652753 -182035101 + MLT2D LTR ERVL 132 414 0 1305 282 48 42 chr2 68652753 68653239 -182034615 - Tigger8 DNA MER2_type -173 493 2 1589 181 17 7 chr2 68654037 68654325 -182033529 + AluJo SINE Alu 2 292 -20 519 246 169 88 chr2 68654335 68654827 -182033027 - MLT1G LTR MaLR 0 542 31 1417 147 77 7 chr2 68654827 68654933 -182032921 - L1MB3 LINE L1 -2 6181 6084 333 0 0 0 chr2 68654933 68654970 -182032884 + (TC)n Simple_repeat Simple_repeat 1 37 0 1417 147 77 7 chr2 68654970 68655149 -182032705 - L1MB3 LINE L1 -99 6084 5876 519 246 169 88 chr2 68655149 68655183 -182032671 - MLT1G LTR MaLR -511 31 1 1816 136 7 11 chr2 68655491 68655778 -182032076 + AluJb SINE Alu 1 286 -26 192 40 0 0 chr2 68655784 68655809 -182032045 + (CA)n Simple_repeat Simple_repeat 2 26 0 22 0 0 0 chr2 68656468 68656490 -182031364 + AT_rich Low_complexity Low_complexity 1 22 0 433 298 13 20 chr2 68656947 68657098 -182030756 + ERVL-D LTR ERVL 8 157 -5607 1148 299 59 3 chr2 68657227 68657585 -182030269 + ERVL-D LTR ERVL 324 701 -5063 567 232 9 0 chr2 68657626 68657738 -182030116 + ERVL-D LTR ERVL 854 966 -4798 1191 190 24 70 chr2 68657738 68657808 -182030046 - MLT2B3 LTR ERVL 0 554 482 2270 94 7 0 chr2 68657808 68658117 -182029737 + AluSq SINE Alu 1 311 -2 1191 190 24 70 chr2 68658117 68658449 -182029405 - MLT2B3 LTR ERVL -72 482 176 27 62 0 0 chr2 68658454 68658502 -182029352 + AT_rich Low_complexity Low_complexity 1 48 0 1081 149 20 31 chr2 68658654 68658849 -182029005 - MLT2A2 LTR ERVL -258 195 3 3913 94 11 8 chr2 68658851 68659385 -182028469 - HERVL-A2 LTR ERVL 0 5654 5119 641 295 97 18 chr2 68659828 68660045 -182027809 + MIR SINE MIR 7 240 -22 1900 127 10 7 chr2 68660332 68660624 -182027230 + AluSx SINE Alu 1 293 -19 1999 96 0 4 chr2 68661135 68661406 -182026448 + AluSq SINE Alu 30 299 -14 2247 191 28 39 chr2 68661910 68662418 -182025436 - MLT1D LTR MaLR -3 502 1 735 186 0 0 chr2 68662486 68662610 -182025244 + FLAM_C SINE Alu 2 125 -18 391 262 64 12 chr2 68662876 68663020 -182024834 - MIR SINE MIR -4 258 107 975 240 150 69 chr2 68663197 68663764 -182024090 + MLT1L LTR MaLR 3 615 0 2235 96 0 0 chr2 68664338 68664631 -182023223 + AluSx SINE Alu 1 293 -19 4550 110 100 99 chr2 68664641 68666063 -182021791 + pTR5 LTR ERV1 66 2438 0 315 276 112 9 chr2 68666068 68666184 -182021670 + L1MC4a LINE L1 5783 5910 -1898 381 293 10 0 chr2 68666198 68666297 -182021557 + MER81 DNA DNA 15 114 0 1405 175 10 30 chr2 68666876 68667173 -182020681 + AluJo SINE Alu 1 291 -21 2035 106 6 19 chr2 68667554 68667865 -182019989 - AluSx SINE Alu -5 307 1 27 62 0 0 chr2 68667865 68667913 -182019941 + AT_rich Low_complexity Low_complexity 1 48 0 2046 45 0 48 chr2 68667946 68668214 -182019640 - AluY SINE Alu -56 255 1 915 292 39 63 chr2 68668542 68669031 -182018823 + MLT1J LTR MaLR 27 503 -8 26 0 0 0 chr2 68669871 68669897 -182017957 + AT_rich Low_complexity Low_complexity 1 26 0 232 172 16 16 chr2 68669909 68669973 -182017881 + CT-rich Low_complexity Low_complexity 3 66 0 1668 144 7 11 chr2 68669974 68670251 -182017603 - AluJo SINE Alu -32 280 5 259 274 105 0 chr2 68670403 68670498 -182017356 + L2 LINE L2 3142 3246 -26 3169 138 21 4 chr2 68670591 68671112 -182016742 - L1MC3 LINE L1 -1 7784 7255 622 274 74 6 chr2 68671836 68672011 -182015843 - MIR SINE MIR -10 252 66 191 241 11 103 chr2 68672382 68672469 -182015385 - L2 LINE L2 -9 3263 3185 183 156 0 0 chr2 68673013 68673045 -182014809 + CT-rich Low_complexity Low_complexity 3 34 0 408 88 25 25 chr2 68673049 68673129 -182014725 + (TCCCC)n Simple_repeat Simple_repeat 5 84 0 567 181 0 0 chr2 68673132 68673226 -182014628 - AluJo/FRAM SINE Alu -32 280 187 361 106 0 0 chr2 68673226 68673273 -182014581 + Alu SINE Alu 245 291 -11 29 0 0 0 chr2 68673275 68673304 -182014550 + AT_rich Low_complexity Low_complexity 1 29 0 765 263 23 0 chr2 68673473 68673690 -182014164 - LTR33A LTR ERVL -3 520 299 614 193 21 1 chr2 68673789 68673914 -182013940 - L1M3 LINE L1 -359 5792 5667 269 211 40 0 chr2 68673976 68674052 -182013802 - MER20B DNA MER1_type -59 724 646 1863 109 0 18 chr2 68674114 68674390 -182013464 + AluSx SINE Alu 1 271 -41 186 43 0 0 chr2 68674428 68674451 -182013403 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1440 258 119 11 chr2 68674486 68674924 -182012930 - MER20B DNA MER1_type -292 491 7 977 296 44 68 chr2 68675031 68675404 -182012450 + LTR16B LTR ERVL 66 430 -34 861 147 0 29 chr2 68675404 68675540 -182012314 - FLAM_C SINE Alu 0 133 2 977 296 44 68 chr2 68675540 68675575 -182012279 + LTR16B LTR ERVL 430 464 0 648 223 132 107 chr2 68675663 68676026 -182011828 - MLT1H LTR MaLR -177 372 1 2063 108 0 10 chr2 68676782 68677099 -182010755 + AluSx SINE Alu 1 314 0 398 276 153 38 chr2 68677099 68677490 -182010364 - L1MC4 LINE L1 -7 8035 7600 381 303 9 9 chr2 68677497 68677606 -182010248 + MER5A DNA MER1_type 65 173 -16 184 250 25 0 chr2 68677963 68678003 -182009851 + MER5A DNA MER1_type 55 95 -94 6154 116 35 8 chr2 68679175 68680538 -182007316 - L1MA8 LINE L1 -2 6289 4893 1236 263 21 50 chr2 68680650 68681026 -182006828 + MLT1H1 LTR MaLR 5 369 -186 737 181 9 154 chr2 68681106 68681333 -182006521 + MLT1H1 LTR MaLR 397 590 0 236 196 37 140 chr2 68681351 68681458 -182006396 - MLT1H LTR MaLR 0 549 454 249 313 89 0 chr2 68682477 68682589 -182005265 - L2 LINE L2 -476 2838 2717 870 299 25 4 chr2 68682592 68682833 -182005021 + MLT1J LTR MaLR 17 262 -249 623 372 58 16 chr2 68682913 68683289 -182004565 - L2 LINE L2 -652 2662 2271 371 198 0 12 chr2 68683739 68683820 -182004034 + FLAM_A SINE Alu 54 133 0 675 94 0 0 chr2 68683830 68683926 -182003928 + (GGAA)n Simple_repeat Simple_repeat 1 96 0 26 0 0 0 chr2 68683981 68684007 -182003847 + AT_rich Low_complexity Low_complexity 1 26 0 281 89 22 0 chr2 68684735 68684780 -182003074 + (TCCCC)n Simple_repeat Simple_repeat 2 47 0 30 69 0 0 chr2 68684979 68685037 -182002817 + GC_rich Low_complexity Low_complexity 1 58 0 183 333 0 0 chr2 68686821 68686875 -182000979 - MIR SINE MIR -68 140 87 1245 143 4 46 chr2 68687246 68687418 -182000436 - AluJo SINE Alu -6 306 128 207 0 0 0 chr2 68687418 68687441 -182000413 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2275 49 3 3 chr2 68687441 68687725 -182000129 - AluY SINE Alu -27 284 1 1245 143 4 46 chr2 68687725 68687789 -182000065 - AluJo SINE Alu -182 130 79 350 263 95 20 chr2 68688366 68688507 -181999347 - MIR SINE MIR -63 145 19 434 254 70 0 chr2 68689542 68689656 -181998198 + MIR SINE MIR 73 194 -68 236 356 11 11 chr2 68690091 68690178 -181997676 + MIR3 SINE MIR 115 201 -7 613 122 17 87 chr2 68690570 68690685 -181997169 + U6 snRNA snRNA 1 107 0 858 218 69 0 chr2 68691005 68691193 -181996661 + MIR SINE MIR 12 212 -50 410 234 83 87 chr2 68691947 68692165 -181995689 + MER112 DNA MER1_type 8 224 -36 733 124 39 23 chr2 68692381 68692510 -181995344 - MER3 DNA MER1_type 0 209 79 368 264 23 0 chr2 68692582 68692669 -181995185 + MIR3 SINE MIR 114 202 -6 455 222 44 7 chr2 68693139 68693155 -181994699 - L1MA10 LINE L1 -2 6332 6317 2379 186 78 32 chr2 68693155 68693644 -181994210 - L1ME1 LINE L1 -12 6154 5636 2090 96 13 17 chr2 68693644 68693779 -181994075 + AluSx SINE Alu 1 135 -177 2157 73 0 14 chr2 68693779 68694097 -181993757 + AluY SINE Alu 4 317 0 2090 96 13 17 chr2 68694097 68694261 -181993593 + AluSx SINE Alu 135 300 -12 2379 186 78 32 chr2 68694261 68694325 -181993529 - L1ME1 LINE L1 -530 5636 5576 2139 213 106 31 chr2 68695276 68695815 -181992039 - MLT1E LTR MaLR -14 579 1 869 251 91 22 chr2 68696099 68696619 -181991235 - MER20B DNA MER1_type -13 770 194 872 184 27 0 chr2 68697082 68697229 -181990625 + FRAM SINE Alu 3 153 -13 926 268 54 53 chr2 68697638 68697822 -181990032 - L1ME4a LINE L1 -1 6120 5938 1967 131 0 0 chr2 68697822 68698140 -181989714 + AluSx SINE Alu 1 318 0 926 268 54 53 chr2 68698140 68698388 -181989466 - L1ME4a LINE L1 -183 5938 5686 2493 58 3 0 chr2 68698392 68698700 -181989154 - AluY SINE Alu -2 309 1 1560 159 22 4 chr2 68700057 68700248 -181987606 - AluJb SINE Alu 0 320 120 311 0 26 0 chr2 68700248 68700287 -181987567 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 1560 159 22 4 chr2 68700287 68700410 -181987444 - AluJb SINE Alu -200 120 1 534 213 155 19 chr2 68700415 68700622 -181987232 - MER20B DNA MER1_type -44 739 505 1257 248 132 15 chr2 68700723 68701187 -181986667 - MER20B DNA MER1_type -254 529 12 199 259 52 0 chr2 68701407 68701465 -181986389 - MIR SINE MIR -66 196 136 1646 178 0 29 chr2 68701538 68701847 -181986007 + AluJo SINE Alu 3 302 -10 2223 108 0 0 chr2 68702039 68702344 -181985510 + AluSx SINE Alu 6 310 -2 964 192 41 46 chr2 68702481 68702700 -181985154 + AluJo SINE Alu 1 218 -94 837 251 198 12 chr2 68702886 68703088 -181984766 - L2 LINE L2 0 3313 3150 213 65 0 0 chr2 68703088 68703119 -181984735 + (TG)n Simple_repeat Simple_repeat 1 31 0 837 251 198 12 chr2 68703119 68703239 -181984615 - L2 LINE L2 -163 3150 2931 1967 166 38 0 chr2 68703529 68703902 -181983952 - L1MA4 LINE L1 -11 6289 5903 1623 195 0 10 chr2 68704180 68704487 -181983367 + AluJb SINE Alu 1 304 -8 781 253 100 9 chr2 68704580 68704809 -181983045 - MIR SINE MIR -2 260 11 2161 89 3 46 chr2 68704901 68705228 -181982626 + AluSp SINE Alu 1 313 0 2274 91 0 0 chr2 68705759 68706056 -181981798 - AluSx SINE Alu -15 297 1 428 252 7 58 chr2 68706084 68706223 -181981631 - L3 LINE CR1 -78 1499 1368 2102 109 0 3 chr2 68707099 68707392 -181980462 - AluSq SINE Alu -21 292 1 2237 89 0 0 chr2 68707602 68707893 -181979961 - AluSx SINE Alu -21 291 1 2378 81 0 0 chr2 68707904 68708213 -181979641 - AluY SINE Alu -2 309 1 821 148 7 0 chr2 68708581 68708716 -181979138 + AluJo SINE Alu 1 136 -176 1409 89 103 14 chr2 68708744 68708957 -181978897 - MSTA LTR MaLR 0 428 197 448 73 0 0 chr2 68708957 68709012 -181978842 - MSTA LTR MaLR -373 55 1 2315 85 3 0 chr2 68709040 68709346 -181978508 - AluSp SINE Alu -6 307 1 671 216 0 0 chr2 68709683 68709808 -181978046 - MER58A DNA MER1_type -51 173 49 210 237 0 0 chr2 68709839 68709877 -181977977 + polypurine Low_complexity Low_complexity 4 41 0 567 279 151 11 chr2 68709882 68710154 -181977700 + L1MC4a LINE L1 5030 5339 -807 253 226 0 0 chr2 68710158 68710220 -181977634 + L1MC4a LINE L1 5366 5427 -737 771 282 75 50 chr2 68710242 68710254 -181977600 + L1MC4a LINE L1 5497 5507 -2301 755 177 167 5 chr2 68710254 68710440 -181977414 - MER20B DNA MER1_type -3 216 1 771 282 75 50 chr2 68710440 68710737 -181977117 + L1MC4a LINE L1 5507 5819 -1989 2378 158 41 2 chr2 68710737 68711175 -181976679 + L1MB4 LINE L1 5726 6180 0 771 282 75 50 chr2 68711175 68711240 -181976614 + L1MC4a LINE L1 5819 5881 -1927 250 229 46 73 chr2 68711502 68711611 -181976243 + L1MC4a LINE L1 6074 6179 -1629 197 283 206 0 chr2 68712022 68712114 -181975740 + MIR SINE MIR 41 151 -111 750 185 0 8 chr2 68712635 68712765 -181975089 - FLAM_A SINE Alu 0 133 5 184 174 33 130 chr2 68714211 68714303 -181973551 - L2 LINE L2 -2072 1242 1160 793 281 85 4 chr2 68715127 68715362 -181972492 + MIR SINE MIR 1 254 -8 1798 177 0 0 chr2 68716086 68716391 -181971463 - AluJo SINE Alu -7 305 1 225 31 0 0 chr2 68716434 68716466 -181971388 + Looper DNA T2_type 992 1023 -535 254 160 0 120 chr2 68718226 68718301 -181969553 + MIR SINE MIR 117 182 -80 232 277 10 40 chr2 68719096 68719197 -181968657 + L1MC4 LINE L1 6616 6713 -1329 437 192 108 23 chr2 68720635 68720765 -181967089 + MIR SINE MIR 6 146 -116 1388 194 10 31 chr2 68720765 68721059 -181966795 + AluJo SINE Alu 1 288 -24 33 25 0 0 chr2 68721059 68721099 -181966755 + AT_rich Low_complexity Low_complexity 1 40 0 1638 95 0 5 chr2 68721109 68721330 -181966524 + AluSx SINE Alu 1 220 -92 198 0 0 0 chr2 68721333 68721355 -181966499 + (A)n Simple_repeat Simple_repeat 1 22 0 275 295 74 11 chr2 68721466 68721561 -181966293 - MER91C DNA MER1_type -39 101 1 385 254 239 0 chr2 68722032 68722174 -181965680 + L1ME3A LINE L1 5945 6120 -50 1814 118 0 14 chr2 68722178 68722458 -181965396 - AluSx SINE Alu -16 296 21 372 219 0 0 chr2 68722665 68722729 -181965125 + MER58 DNA MER1_type 5 68 -2352 426 226 0 0 chr2 68722795 68722879 -181964975 - ORSL DNA AcHobo 0 275 192 806 219 0 0 chr2 68722880 68723026 -181964828 - FRAM SINE Alu -16 150 5 374 198 19 57 chr2 68723851 68723957 -181963897 + MIR3 SINE MIR 79 180 -28 705 209 80 0 chr2 68724057 68724220 -181963634 + MER5B DNA MER1_type 3 178 0 193 304 54 22 chr2 68724220 68724306 -181963548 + MER5A DNA MER1_type 99 187 -2 2001 100 33 0 chr2 68724495 68724765 -181963089 + AluSx SINE Alu 1 279 -33 2224 105 0 0 chr2 68724931 68725237 -181962617 - AluSg SINE Alu -4 306 1 324 287 29 88 chr2 68725418 68725554 -181962300 - MER5B DNA MER1_type 0 178 51 1694 174 7 7 chr2 68725587 68725875 -181961979 + AluJb SINE Alu 1 288 -24 2032 92 7 11 chr2 68726008 68726325 -181961529 + AluSx SINE Alu 1 316 0 236 255 31 31 chr2 68727109 68727207 -181960647 - LTR67 LTR ERVL -54 503 406 828 298 104 48 chr2 68727553 68728111 -181959743 + Tigger8 DNA MER2_type 70 658 -8 207 0 0 0 chr2 68728758 68728781 -181959073 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 267 29 0 0 chr2 68728788 68728806 -181959048 + (GA)n Simple_repeat Simple_repeat 1 21 -13 2033 88 3 83 chr2 68728806 68729145 -181958709 + AluSx SINE Alu 1 312 0 267 29 0 0 chr2 68729145 68729160 -181958694 + (GA)n Simple_repeat Simple_repeat 20 34 0 548 162 291 0 chr2 68729417 68729534 -181958320 + MER5A DNA MER1_type 37 187 -2 2195 98 0 0 chr2 68729670 68730005 -181957849 - AluSq SINE Alu 0 335 1 1100 253 173 9 chr2 68730006 68730429 -181957425 - L2 LINE L2 -389 2925 2434 2140 96 3 32 chr2 68730670 68730983 -181956871 - AluSx SINE Alu -8 304 1 237 233 22 67 chr2 68731413 68731503 -181956351 - L2 LINE L2 -12 3301 3216 2135 116 0 3 chr2 68731853 68732156 -181955698 - AluSq SINE Alu -11 302 1 24 53 0 0 chr2 68732192 68732230 -181955624 + AT_rich Low_complexity Low_complexity 1 38 0 2010 112 28 0 chr2 68732412 68732699 -181955155 - AluSx SINE Alu -17 295 1 518 290 158 46 chr2 68733302 68733749 -181954105 + L2 LINE L2 2438 2998 -315 1907 132 4 0 chr2 68733749 68734053 -181953801 + AluSx SINE Alu 1 305 0 518 290 158 46 chr2 68734053 68734268 -181953586 + L2 LINE L2 2998 3188 -125 1775 136 25 11 chr2 68734273 68734559 -181953295 + AluJb SINE Alu 5 294 -18 245 257 44 88 chr2 68734706 68734819 -181953035 + MLT1K LTR MaLR 37 144 -444 2063 120 3 3 chr2 68734882 68735191 -181952663 + AluSx SINE Alu 1 309 -3 416 188 0 12 chr2 68735317 68735397 -181952457 - LTR33 LTR ERVL 0 521 443 890 116 82 20 chr2 68735397 68735543 -181952311 + FRAM SINE Alu 9 163 -13 473 269 62 0 chr2 68735764 68735909 -181951945 - LTR33 LTR ERVL -367 154 1 279 286 34 54 chr2 68735957 68736104 -181951750 + MLT1K LTR MaLR 385 528 -60 281 302 44 19 chr2 68736181 68736340 -181951514 - L2 LINE L2 -292 2980 2818 22 56 0 0 chr2 68736824 68736860 -181950994 + AT_rich Low_complexity Low_complexity 1 36 0 1782 125 0 0 chr2 68737039 68737303 -181950551 + AluSx SINE Alu 34 297 -15 570 268 36 62 chr2 68737307 68737501 -181950353 - MIR SINE MIR -72 190 2 478 231 27 27 chr2 68737824 68737971 -181949883 + L1ME LINE L1 5571 5717 -404 1415 174 57 7 chr2 68738015 68738144 -181949710 + AluJo SINE Alu 1 122 -190 189 0 0 0 chr2 68738144 68738165 -181949689 + (TTAAA)n Simple_repeat Simple_repeat 3 23 0 1415 174 57 7 chr2 68738165 68738316 -181949538 + AluJo SINE Alu 122 295 -17 2282 92 0 0 chr2 68738322 68738628 -181949226 + AluSg SINE Alu 1 306 -4 22 0 0 0 chr2 68738628 68738650 -181949204 + AT_rich Low_complexity Low_complexity 1 22 0 208 274 87 66 chr2 68739427 68739583 -181948271 + L2 LINE L2 2149 2313 -1001 2087 114 3 0 chr2 68739583 68739891 -181947963 + AluY SINE Alu 1 309 -2 208 274 87 66 chr2 68739891 68739975 -181947879 + L2 LINE L2 2313 2394 -920 3351 131 20 17 chr2 68740059 68740601 -181947253 - LTR10A LTR ERV1 -65 544 1 9578 231 26 25 chr2 68740602 68742756 -181945098 - LTR10A-int LTR ERV1 -2 6647 4491 284 174 0 0 chr2 68742756 68742802 -181945052 + LTR10C LTR ERV1 546 591 0 204 298 0 0 chr2 68743263 68743310 -181944544 + polypyrimidine Low_complexity Low_complexity 4 50 0 201 74 0 0 chr2 68743330 68743357 -181944497 + (T)n Simple_repeat Simple_repeat 1 27 0 1509 205 145 90 chr2 68743669 68744212 -181943642 - MLT1E LTR MaLR 0 593 1 639 264 26 92 chr2 68744212 68744326 -181943528 - L1MC4 LINE L1 -78 7964 7844 2359 102 76 15 chr2 68744326 68744669 -181943185 + THE1B LTR MaLR 1 364 0 639 264 26 92 chr2 68744669 68745019 -181942835 - L1MC4 LINE L1 -198 7844 7531 2200 135 34 9 chr2 68745157 68745506 -181942348 - LTR45B LTR ERV1 -131 358 1 250 235 94 12 chr2 68745509 68745594 -181942260 - L1MC5 LINE L1 -534 7427 7336 855 228 64 59 chr2 68745619 68746040 -181941814 - L1MC4 LINE L1 -621 7421 6999 292 207 50 14 chr2 68746053 68746193 -181941661 + (TA)n Simple_repeat Simple_repeat 1 145 0 246 189 67 122 chr2 68746285 68746345 -181941509 - L1MC4 LINE L1 -1023 7019 6964 1939 124 29 16 chr2 68746345 68746651 -181941203 + AluSx SINE Alu 1 310 -2 246 189 67 122 chr2 68746651 68746680 -181941174 - L1MC4 LINE L1 -1078 6964 6935 3636 169 53 55 chr2 68746689 68747326 -181940528 - L1MB8 LINE L1 -6 6172 5541 941 217 0 0 chr2 68747326 68747492 -181940362 - AluJo SINE Alu 0 302 137 3636 169 53 55 chr2 68747492 68747747 -181940107 - L1MB8 LINE L1 -637 5541 5287 1883 140 6 16 chr2 68748259 68748574 -181939280 + AluSx SINE Alu 1 312 0 28 0 0 0 chr2 68748939 68748967 -181938887 + AT_rich Low_complexity Low_complexity 1 28 0 861 293 104 36 chr2 68749142 68749613 -181938241 + ERVL LTR ERVL 4916 5418 -346 315 251 52 126 chr2 68749961 68750152 -181937702 + LTR67 LTR ERVL 20 196 -361 398 276 61 73 chr2 68750252 68750498 -181937356 - MLT1K LTR MaLR -204 384 142 334 288 12 0 chr2 68750624 68750704 -181937150 - MIR3 SINE MIR -4 204 124 843 126 0 0 chr2 68751336 68751455 -181936399 + FLAM_C SINE Alu 5 123 -20 23 33 0 0 chr2 68752426 68752456 -181935398 + GC_rich Low_complexity Low_complexity 1 30 0 295 232 0 0 chr2 68753422 68753478 -181934376 + L2 LINE L2 3237 3292 -21 768 131 25 8 chr2 68753641 68753763 -181934091 - AluJo SINE Alu -171 141 18 663 238 31 6 chr2 68753768 68753928 -181933926 + MIR SINE MIR 97 260 -2 1293 167 13 4 chr2 68754041 68754269 -181933585 - AluJo SINE Alu -23 289 60 2209 113 0 0 chr2 68754322 68754631 -181933223 - AluSq SINE Alu -4 309 1 532 227 175 7 chr2 68755543 68755697 -181932157 - MER5A DNA MER1_type 0 189 10 923 137 0 0 chr2 68756272 68756403 -181931451 + FLAM_C SINE Alu 1 131 -2 2339 94 17 0 chr2 68756719 68757018 -181930836 + AluSx SINE Alu 1 304 -8 2150 127 3 0 chr2 68758076 68758376 -181929478 + AluSx SINE Alu 1 301 -11 2053 139 0 3 chr2 68758378 68758672 -181929182 + AluSx SINE Alu 1 293 -19 2545 70 0 0 chr2 68760277 68760579 -181927275 + AluY SINE Alu 1 302 -9 940 261 84 39 chr2 68760954 68761258 -181926596 + L1MC4a LINE L1 5505 5794 -2014 2966 166 14 60 chr2 68761258 68761511 -181926343 - MER6A DNA MER2_type -260 605 342 2042 126 45 0 chr2 68761511 68761797 -181926057 + AluSx SINE Alu 1 299 -13 2966 166 14 60 chr2 68761797 68762139 -181925715 - MER6A DNA MER2_type -523 342 -14 2298 98 0 10 chr2 68762139 68762272 -181925582 + AluSg SINE Alu 1 134 -176 2431 89 0 19 chr2 68762272 68762570 -181925284 + AluSg1 SINE Alu 1 294 -15 207 0 0 0 chr2 68762570 68762593 -181925261 + (TA)n Simple_repeat Simple_repeat 1 23 0 2431 89 0 19 chr2 68762593 68762609 -181925245 + AluSg1 SINE Alu 294 309 0 2298 98 0 10 chr2 68762609 68762770 -181925084 + AluSg SINE Alu 134 292 -18 2966 166 14 60 chr2 68762770 68762807 -181925047 - MER6A DNA MER2_type -878 4294967283 1 940 261 84 39 chr2 68762807 68762916 -181924938 + L1MC4a LINE L1 5794 5937 -1871 1945 124 21 21 chr2 68762926 68763208 -181924646 + AluSx SINE Alu 1 282 -30 200 319 56 0 chr2 68763442 68763514 -181924340 - MIR SINE MIR -1 261 186 1726 102 0 4 chr2 68764453 68764678 -181923176 + AluJb SINE Alu 85 308 -4 219 274 189 0 chr2 68766183 68766278 -181921576 + MIR3 SINE MIR 81 193 -15 323 333 0 10 chr2 68766660 68766756 -181921098 - MIR SINE MIR -166 96 2 619 224 121 43 chr2 68768874 68769106 -181918748 - MIR SINE MIR -1 261 12 350 175 16 0 chr2 68769167 68769230 -181918624 + MER103 DNA DNA 20 83 -83 203 223 204 10 chr2 68769408 68769511 -181918343 + MIR SINE MIR 90 212 -50 625 202 0 8 chr2 68770485 68770609 -181917245 + FLAM_A SINE Alu 3 125 -8 655 243 0 14 chr2 68770732 68770876 -181916978 - MER3 DNA MER1_type -65 144 3 1402 145 103 46 chr2 68770959 68771241 -181916613 + AluJb SINE Alu 1 298 -14 487 148 57 0 chr2 68771380 68771468 -181916386 - MER94 DNA DNA -34 100 8 875 149 0 43 chr2 68772613 68772754 -181915100 + AluJo SINE Alu 1 135 -177 2504 75 0 7 chr2 68772823 68773128 -181914726 - AluSp SINE Alu -10 303 1 457 161 0 0 chr2 68824193 68824284 -181863570 + AluSg/x SINE Alu 217 307 0 2273 104 3 7 chr2 68824321 68824620 -181863234 - AluSx SINE Alu -14 298 1 22 0 0 0 chr2 68824786 68824808 -181863046 + AT_rich Low_complexity Low_complexity 1 22 0 832 147 0 23 chr2 68825099 68825228 -181862626 + FLAM_C SINE Alu 1 126 -7 962 168 0 40 chr2 68825533 68825706 -181862148 + FRAM SINE Alu 1 166 0 27 29 0 0 chr2 68826531 68826565 -181861289 + AT_rich Low_complexity Low_complexity 1 34 0 2195 159 35 45 chr2 68826666 68826735 -181861119 + MSTD LTR MaLR 4 72 -324 2823 13 0 6 chr2 68826735 68827048 -181860806 + AluYb8 SINE Alu 1 311 -7 2195 159 35 45 chr2 68827048 68827375 -181860479 + MSTD LTR MaLR 72 396 0 21 0 0 0 chr2 68827743 68827764 -181860090 + AT_rich Low_complexity Low_complexity 1 21 0 2154 131 0 10 chr2 68828047 68828361 -181859493 + AluSx SINE Alu 1 311 -1 487 266 62 70 chr2 68828533 68828774 -181859080 + MIR SINE MIR 24 262 0 1522 186 18 11 chr2 68829257 68829537 -181858317 - AluJo SINE Alu -30 282 1 851 172 8 0 chr2 68829537 68829671 -181858183 - AluJo SINE Alu -177 135 1 1915 158 0 13 chr2 68829741 68830044 -181857810 - AluJb SINE Alu -13 299 1 443 319 80 0 chr2 68830124 68830262 -181857592 + MIR SINE MIR 49 197 -65 1971 134 3 3 chr2 68830637 68830951 -181856903 - AluSx SINE Alu 0 312 1 1577 165 13 65 chr2 68831080 68831389 -181856465 + AluJb SINE Alu 1 293 -19 2093 81 0 4 chr2 68831397 68831658 -181856196 + AluSq SINE Alu 1 260 -53 675 124 0 0 chr2 68831659 68831764 -181856090 + AluSg/x SINE Alu 205 309 0 861 167 0 0 chr2 68831897 68832029 -181855825 + FLAM_C SINE Alu 2 133 0 40 0 0 0 chr2 68832029 68832069 -181855785 + AT_rich Low_complexity Low_complexity 1 40 0 2242 105 3 3 chr2 68832349 68832654 -181855200 + AluSg SINE Alu 1 305 -5 1602 157 78 4 chr2 68833147 68833428 -181854426 + AluJo SINE Alu 1 302 -10 2289 113 10 0 chr2 68834050 68834359 -181853495 + AluSx SINE Alu 1 312 0 1610 158 10 59 chr2 68834440 68834743 -181853111 + AluJo SINE Alu 1 288 -24 2211 100 20 3 chr2 68834868 68835169 -181852685 + AluY SINE Alu 1 306 -5 2086 120 0 16 chr2 68835448 68835757 -181852097 - AluSp SINE Alu -9 304 1 931 186 98 0 chr2 68836159 68836352 -181851502 - MER20 DNA MER1_type 0 219 8 2348 82 3 0 chr2 68836767 68837059 -181850795 + AluSp SINE Alu 3 295 -18 2301 93 3 0 chr2 68837452 68837753 -181850101 + AluSq SINE Alu 3 304 -9 2319 93 0 3 chr2 68837842 68838144 -181849710 + AluSx SINE Alu 1 301 -11 2223 94 10 16 chr2 68838605 68838913 -181848941 - AluSp SINE Alu -7 306 1 2438 61 0 14 chr2 68842440 68842737 -181845117 + AluY SINE Alu 1 293 -18 1778 154 14 10 chr2 68846133 68846425 -181841429 - AluJb SINE Alu -19 293 1 2317 100 0 0 chr2 68846616 68846916 -181840938 - AluSx SINE Alu -12 300 1 1645 191 10 0 chr2 68848444 68848738 -181839116 - AluJo SINE Alu -15 297 1 2088 119 27 0 chr2 68848906 68849201 -181838653 + AluSg SINE Alu 1 303 -7 306 308 172 30 chr2 68849235 68849433 -181838421 + MIR SINE MIR 23 248 -14 711 164 16 31 chr2 68849561 68849673 -181838181 - FLAM_A SINE Alu -185 126 15 1654 184 88 28 chr2 68849673 68850027 -181837827 + THE1C LTR MaLR 1 375 0 711 164 16 31 chr2 68850027 68850042 -181837812 - FLAM_A SINE Alu -296 15 1 331 311 113 73 chr2 68850292 68850538 -181837316 + L3 LINE CR1 587 821 -756 2244 88 7 7 chr2 68850538 68850835 -181837019 - AluSg SINE Alu -13 297 1 331 311 113 73 chr2 68850835 68850886 -181836968 + L3 LINE CR1 821 868 -709 1863 165 3 3 chr2 68850886 68851183 -181836671 - AluJb SINE Alu -15 297 1 331 311 113 73 chr2 68851183 68851216 -181836638 + L3 LINE CR1 868 898 -679 2545 64 3 0 chr2 68851216 68851527 -181836327 + AluSp SINE Alu 1 312 -1 331 311 113 73 chr2 68851527 68851952 -181835902 + L3 LINE CR1 898 1375 -202 310 213 93 13 chr2 68851975 68852050 -181835804 + AluS SINE Alu 221 301 -1 817 189 0 8 chr2 68852114 68852246 -181835608 - FLAM_C SINE Alu -10 133 3 1469 172 7 58 chr2 68852268 68852576 -181835278 - AluJo SINE Alu -20 292 1 2113 120 0 31 chr2 68852644 68852784 -181835070 + AluSx SINE Alu 3 146 -166 2288 99 0 3 chr2 68852784 68853078 -181834776 + AluSg SINE Alu 1 293 -17 2113 120 0 31 chr2 68853078 68853254 -181834600 + AluSx SINE Alu 146 309 -3 2090 153 135 19 chr2 68855447 68855746 -181832108 - L1MB5 LINE L1 0 6174 5911 1886 165 0 3 chr2 68855746 68856049 -181831805 - AluSx SINE Alu -10 302 1 2090 153 135 19 chr2 68856049 68856247 -181831607 - L1MB5 LINE L1 -263 5911 5625 438 227 0 11 chr2 68856416 68856504 -181831350 + MER3 DNA MER1_type 1 87 -122 709 204 62 37 chr2 68856523 68856685 -181831169 - FRAM SINE Alu -2 174 9 385 164 27 0 chr2 68856685 68856758 -181831096 + MER3 DNA MER1_type 135 209 0 331 278 58 58 chr2 68856759 68856964 -181830890 + L1MC5 LINE L1 7331 7535 -426 2241 115 0 3 chr2 68857032 68857336 -181830518 + AluSg SINE Alu 1 303 -7 2096 125 7 3 chr2 68857390 68857695 -181830159 + AluSx SINE Alu 1 306 -6 2165 140 0 0 chr2 68857776 68858083 -181829771 + AluSx SINE Alu 1 307 -5 410 272 139 96 chr2 68858532 68858655 -181829199 - L1MB5 LINE L1 -685 5479 5363 2383 72 10 0 chr2 68858655 68858959 -181828895 - AluSp SINE Alu -6 307 1 410 272 139 96 chr2 68858959 68859273 -181828581 - L1MB5 LINE L1 -801 5363 5012 983 185 72 105 chr2 68859280 68859560 -181828294 - Charlie1a DNA MER1_type -1999 762 497 2154 115 0 0 chr2 68859560 68859855 -181827999 + AluSg SINE Alu 3 297 -13 983 185 72 105 chr2 68859855 68859974 -181827880 - Charlie1a DNA MER1_type -2264 497 376 1125 175 84 20 chr2 68859976 68860227 -181827627 + AluJo SINE Alu 31 297 -15 1141 171 48 157 chr2 68860230 68860651 -181827203 - Charlie1a DNA MER1_type -1074 381 7 2384 65 7 3 chr2 68860682 68860990 -181826864 - AluSc SINE Alu 0 309 1 693 194 0 16 chr2 68861146 68861270 -181826584 - FLAM_A SINE Alu -7 126 5 2293 94 0 19 chr2 68862135 68862453 -181825401 + AluSq SINE Alu 1 312 -1 2248 73 3 0 chr2 68862682 68862970 -181824884 - AluSg SINE Alu -19 291 3 245 163 0 0 chr2 68863783 68863826 -181824028 - Alu SINE Alu -3 305 263 997 116 0 0 chr2 68863827 68863965 -181823889 - AluSq/x SINE Alu -174 138 1 1949 138 7 7 chr2 68863972 68864277 -181823577 - AluSx SINE Alu -7 305 1 817 107 15 8 chr2 68864406 68864537 -181823317 - AluSg/x SINE Alu -17 295 164 1388 132 35 0 chr2 68864757 68864985 -181822869 + AluSq SINE Alu 64 299 -14 1780 99 27 4 chr2 68865033 68865296 -181822558 + AluSq SINE Alu 42 310 -3 2036 125 3 10 chr2 68865434 68865738 -181822116 + AluSq SINE Alu 1 302 -11 2205 104 0 19 chr2 68866334 68866651 -181821203 + AluSx SINE Alu 1 311 -1 966 184 187 56 chr2 68867002 68867072 -181820782 + L1MD3 LINE L1 6794 6853 -1005 2186 74 7 7 chr2 68867072 68867368 -181820486 + AluSc SINE Alu 1 296 -13 966 184 187 56 chr2 68867368 68867564 -181820290 + L1MD3 LINE L1 6853 7022 -836 1584 165 9 44 chr2 68867564 68867885 -181819969 + AluJo SINE Alu 2 311 -1 966 184 187 56 chr2 68867885 68867992 -181819862 + L1MD3 LINE L1 7022 7268 -590 1851 148 3 3 chr2 68867992 68868290 -181819564 + AluSx SINE Alu 1 298 -14 1747 175 46 28 chr2 68868291 68868685 -181819169 + L1MD3 LINE L1 7595 7995 0 1838 101 16 0 chr2 68868717 68868974 -181818880 + AluSx SINE Alu 1 261 -51 2264 43 11 0 chr2 68869078 68869354 -181818500 - AluY SINE Alu -11 300 22 1835 122 42 0 chr2 68869458 68869744 -181818110 + AluSg SINE Alu 1 298 -12 1782 136 27 3 chr2 68869892 68870187 -181817667 - AluSx SINE Alu -10 302 1 427 127 14 0 chr2 68870249 68870320 -181817534 + FLAM SINE Alu 54 125 -18 1886 147 3 0 chr2 68870353 68870653 -181817201 - AluSx SINE Alu -11 301 1 2046 111 37 0 chr2 68871322 68871620 -181816234 - AluSx SINE Alu -3 309 1 1780 107 15 4 chr2 68871771 68872033 -181815821 - AluSx SINE Alu -4 308 44 1253 133 0 0 chr2 68872062 68872250 -181815604 + AluSg/x SINE Alu 123 310 0 409 83 0 33 chr2 68872267 68872327 -181815527 + Alu SINE Alu 1 58 -255 2057 83 21 3 chr2 68873357 68873645 -181814209 + AluSp SINE Alu 2 294 -19 2242 65 0 3 chr2 68873648 68873940 -181813914 - AluY SINE Alu -20 291 1 223 294 103 29 chr2 68874039 68874175 -181813679 - MIR SINE MIR -41 221 76 234 156 0 0 chr2 68875831 68875876 -181811978 + (CCG)n Simple_repeat Simple_repeat 2 46 0 254 270 29 29 chr2 68876391 68876528 -181811326 + G-rich Low_complexity Low_complexity 1 137 0 181 314 157 16 chr2 68876761 68876946 -181810908 + L2 LINE L2 2552 2762 -552 2022 119 10 0 chr2 68877633 68877926 -181809928 + AluSg SINE Alu 1 296 -14 261 0 0 0 chr2 68877961 68877990 -181809864 + (CA)n Simple_repeat Simple_repeat 1 29 0 2097 79 0 51 chr2 68878121 68878436 -181809418 + AluSc SINE Alu 2 300 -9 1039 226 135 84 chr2 68878555 68878757 -181809097 - MER34C LTR ERV1 0 585 395 2163 87 0 13 chr2 68878757 68879057 -181808797 + AluY SINE Alu 1 296 -15 1039 226 135 84 chr2 68879057 68879068 -181808786 - MER34C LTR ERV1 -190 395 386 1864 133 0 36 chr2 68879068 68879210 -181808644 + AluSx SINE Alu 2 148 -164 2063 107 17 10 chr2 68879210 68879509 -181808345 + AluSx SINE Alu 1 301 -11 1864 133 0 36 chr2 68879509 68879674 -181808180 + AluSx SINE Alu 148 298 -14 1039 226 135 84 chr2 68879674 68880016 -181807838 - MER34C LTR ERV1 -199 386 1 1920 108 0 24 chr2 68880286 68880605 -181807249 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 68880606 68880627 -181807227 + AT_rich Low_complexity Low_complexity 1 21 0 405 221 0 23 chr2 68881016 68881102 -181806752 + L1ME1 LINE L1 5942 6025 -141 1270 161 18 0 chr2 68881105 68881322 -181806532 - AluJo SINE Alu -7 305 85 470 220 0 100 chr2 68881322 68881422 -181806432 + L1ME1 LINE L1 6024 6106 -60 2099 122 0 0 chr2 68881422 68881725 -181806129 + AluSx SINE Alu 1 303 -9 470 220 0 100 chr2 68881725 68881774 -181806080 + L1ME1 LINE L1 6106 6158 -8 2171 95 3 0 chr2 68881775 68882070 -181805784 + AluSg SINE Alu 1 296 -14 1785 152 7 17 chr2 68882081 68882377 -181805477 + AluJb SINE Alu 1 293 -19 184 336 29 62 chr2 68882384 68882592 -181805262 - L2 LINE L2 -181 3091 2891 2032 120 0 3 chr2 68882750 68883051 -181804803 - AluSg SINE Alu -10 300 1 696 144 0 53 chr2 68883128 68883304 -181804550 + FLAM_C SINE Alu 1 143 0 664 252 53 122 chr2 68883637 68884078 -181803776 - MER67D LTR ERV1 0 543 105 486 0 0 0 chr2 68884078 68884132 -181803722 + (TA)n Simple_repeat Simple_repeat 2 55 0 2075 90 17 0 chr2 68884148 68884436 -181803418 + AluSp SINE Alu 1 293 -20 717 181 0 0 chr2 68884445 68884561 -181803293 - AluJb SINE Alu -195 117 2 423 205 27 62 chr2 68884564 68884676 -181803178 - MER67B LTR ERV1 -409 252 145 1808 149 19 7 chr2 68884683 68884991 -181802863 - AluJb SINE Alu 0 312 1 214 336 7 58 chr2 68885111 68885248 -181802606 + L2 LINE L2 2970 3099 -173 2026 74 42 3 chr2 68885318 68885601 -181802253 + AluSp SINE Alu 1 294 -19 940 164 62 17 chr2 68885601 68885778 -181802076 - MER3 DNA MER1_type -20 189 5 338 286 53 35 chr2 68885788 68885959 -181801895 + L2 LINE L2 3130 3303 -10 2238 103 0 0 chr2 68885983 68886285 -181801569 - AluSq SINE Alu -11 302 1 1901 127 0 13 chr2 68886412 68886711 -181801143 + AluSx SINE Alu 1 295 -17 2056 127 3 0 chr2 68887144 68887444 -181800410 + AluSx SINE Alu 1 301 -11 1820 104 80 0 chr2 68887771 68888058 -181799796 + AluSq SINE Alu 1 310 -3 1043 134 23 12 chr2 68888058 68888229 -181799625 + AluSg/x SINE Alu 126 298 -14 636 213 140 0 chr2 68888240 68888390 -181799464 + FAM SINE Alu 2 172 -3 280 254 127 27 chr2 68889051 68889161 -181798693 - L2 LINE L2 0 3313 3193 2026 139 3 0 chr2 68889168 68889463 -181798391 + AluSx SINE Alu 1 296 -16 1629 193 52 68 chr2 68889620 68889987 -181797867 - MER110A LTR ERV1 -3 465 135 2116 95 0 14 chr2 68889987 68890281 -181797573 - AluSq SINE Alu -21 292 3 1629 193 52 68 chr2 68890281 68890390 -181797464 - MER110A LTR ERV1 -333 135 26 486 333 67 21 chr2 68890512 68890752 -181797102 - L2 LINE L2 -195 3077 2827 414 97 16 16 chr2 68890770 68890832 -181797022 - LTR49 LTR ERV1 0 595 534 1853 116 55 7 chr2 68890834 68891127 -181796727 + AluSg SINE Alu 2 308 -2 2242 101 3 0 chr2 68891202 68891509 -181796345 + AluSc SINE Alu 1 308 -1 300 53 0 0 chr2 68891528 68891566 -181796288 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1815 113 0 12 chr2 68891567 68891823 -181796031 - AluSx SINE Alu -59 253 1 21 0 0 0 chr2 68892007 68892028 -181795826 + AT_rich Low_complexity Low_complexity 1 21 0 1998 126 0 13 chr2 68893011 68893313 -181794541 - AluSx SINE Alu -14 298 1 482 173 10 0 chr2 68893391 68893495 -181794359 + GA-rich Low_complexity Low_complexity 4 108 0 238 80 200 0 chr2 68893574 68893671 -181794183 - Alu SINE Alu 0 348 242 231 61 0 0 chr2 68893696 68893729 -181794125 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 1489 121 57 50 chr2 68893729 68893868 -181793986 - AluJo SINE Alu -29 283 146 267 31 0 0 chr2 68893868 68893900 -181793954 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 1994 121 3 0 chr2 68893901 68894183 -181793671 - AluSp SINE Alu -30 283 1 1489 121 57 50 chr2 68894183 68894322 -181793532 - AluJo SINE Alu -165 147 1 1133 168 79 0 chr2 68894393 68894595 -181793259 - MER20 DNA MER1_type -1 218 1 717 137 0 48 chr2 68894732 68894856 -181792998 - FLAM_C SINE Alu -10 133 16 2191 83 17 0 chr2 68895059 68895361 -181792493 - AluY SINE Alu -4 307 1 1958 121 3 17 chr2 68895522 68895820 -181792034 + AluSx SINE Alu 1 294 -18 2583 147 12 37 chr2 68895881 68896192 -181791662 + L1MB3 LINE L1 5705 6002 -181 1927 127 0 0 chr2 68896192 68896498 -181791356 - AluSx SINE Alu 0 306 1 2583 147 12 37 chr2 68896498 68896674 -181791180 + L1MB3 LINE L1 6002 6181 -2 764 174 0 0 chr2 68897939 68898060 -181789794 - FLAM_C SINE Alu -12 121 1 795 256 0 45 chr2 68898127 68898326 -181789528 - MIR SINE MIR -71 191 2 2213 116 0 0 chr2 68898351 68898661 -181789193 + AluSx SINE Alu 1 310 -2 2296 66 0 13 chr2 68898817 68899119 -181788735 + AluY SINE Alu 1 298 -13 3494 140 2 19 chr2 68899200 68899736 -181788118 - MER1A DNA MER1_type 0 527 1 425 318 68 31 chr2 68899768 68899960 -181787894 + L2 LINE L2 3115 3313 0 681 231 154 0 chr2 68900354 68900510 -181787344 + MER5A DNA MER1_type 10 189 0 565 178 0 0 chr2 68900626 68900727 -181787127 - AluSg/x SINE Alu -3 309 209 2139 90 0 0 chr2 68900728 68901005 -181786849 - AluSx SINE Alu -35 277 1 2170 101 0 3 chr2 68901016 68901314 -181786540 - AluSq SINE Alu -14 299 3 894 182 6 6 chr2 68901428 68901593 -181786261 - AluJo SINE Alu -30 282 118 2162 106 0 0 chr2 68901617 68901909 -181785945 - AluSq SINE Alu -21 292 1 373 174 98 0 chr2 68901914 68902006 -181785848 - L1MDa LINE L1 -3961 2579 2479 204 333 192 0 chr2 68902310 68902388 -181785466 + L2 LINE L2 3125 3217 -55 451 268 25 0 chr2 68902448 68902605 -181785249 - L1MC4 LINE L1 0 8042 7882 1729 152 20 10 chr2 68902764 68903060 -181784794 + AluJb SINE Alu 1 299 -13 2393 37 17 7 chr2 68903394 68903693 -181784161 - AluY SINE Alu -9 302 1 2116 118 3 0 chr2 68903917 68904221 -181783633 + AluSx SINE Alu 1 305 -7 1996 117 10 3 chr2 68904783 68905074 -181782780 + AluSx SINE Alu 1 293 -19 815 167 8 0 chr2 68905119 68905251 -181782603 - FLAM_C SINE Alu 0 133 1 1859 154 0 6 chr2 68905275 68905587 -181782267 - AluJb SINE Alu -2 310 1 1875 237 108 71 chr2 68905660 68906205 -181781649 - L2 LINE L2 -4 3309 2785 2075 99 3 23 chr2 68906205 68906508 -181781346 + AluSx SINE Alu 1 297 -15 1875 237 108 71 chr2 68906508 68906520 -181781334 - L2 LINE L2 -528 2785 2775 2227 67 0 70 chr2 68906520 68906849 -181781005 + AluY SINE Alu 4 309 -2 1875 237 108 71 chr2 68906849 68907342 -181780512 - L2 LINE L2 -538 2775 2213 317 248 103 51 chr2 68907369 68907486 -181780368 - L1MC4 LINE L1 -6 8036 7914 799 144 0 0 chr2 68907500 68907618 -181780236 - FLAM_C SINE Alu -15 118 1 298 207 74 50 chr2 68907746 68907867 -181779987 - L2 LINE L2 -1123 2191 2068 2018 144 0 0 chr2 68907911 68908223 -181779631 - AluSq SINE Alu -1 312 1 1988 141 29 10 chr2 68908452 68908758 -181779096 + AluJb SINE Alu 1 312 0 22 0 0 0 chr2 68909009 68909031 -181778823 + AT_rich Low_complexity Low_complexity 1 22 0 815 192 0 20 chr2 68909174 68909325 -181778529 - FRAM SINE Alu -18 148 1 24 0 0 0 chr2 68909475 68909499 -181778355 + AT_rich Low_complexity Low_complexity 1 24 0 2190 138 0 0 chr2 68909537 68909848 -181778006 + AluSx SINE Alu 1 311 -1 293 325 0 0 chr2 68910210 68910293 -181777561 + GA-rich Low_complexity Low_complexity 2 84 0 380 316 66 7 chr2 68910849 68911001 -181776853 - MIR SINE MIR -89 173 13 2435 91 0 0 chr2 68911890 68912187 -181775667 - AluSx SINE Alu -15 297 1 1418 152 5 0 chr2 68912241 68912452 -181775402 + AluJb SINE Alu 85 296 -16 374 194 0 0 chr2 68912475 68912537 -181775317 + L1ME LINE L1 5601 5662 -508 639 70 20 20 chr2 68912538 68912638 -181775216 + AluY SINE Alu 193 292 -19 2320 122 0 0 chr2 68912814 68913118 -181774736 - AluSx SINE Alu -8 304 1 2075 108 4 7 chr2 68913160 68913439 -181774415 - AluSp SINE Alu -34 279 2 24 0 0 0 chr2 68913440 68913464 -181774390 + AT_rich Low_complexity Low_complexity 1 24 0 2269 121 0 0 chr2 68913723 68914029 -181773825 - AluSx SINE Alu -6 306 1 44 80 0 0 chr2 68914037 68914137 -181773717 + AT_rich Low_complexity Low_complexity 1 100 0 478 198 0 91 chr2 68914137 68914258 -181773596 - FLAM_A SINE Alu -18 124 15 943 210 51 91 chr2 68914270 68914453 -181773401 - Charlie2a DNA MER1_type -2018 844 655 2703 36 0 0 chr2 68914453 68914757 -181773097 + AluY SINE Alu 1 304 -7 943 210 51 91 chr2 68914757 68914863 -181772991 - Charlie2a DNA MER1_type -2207 655 546 2345 107 0 0 chr2 68914863 68915171 -181772683 + AluSx SINE Alu 1 308 -4 943 210 51 91 chr2 68915171 68915272 -181772582 - Charlie2a DNA MER1_type -2316 546 401 234 0 0 0 chr2 68915519 68915545 -181772309 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2082 107 11 0 chr2 68915547 68915827 -181772027 - AluSx SINE Alu -29 283 1 204 125 0 0 chr2 68915953 68915985 -181771869 + (A)n Simple_repeat Simple_repeat 1 32 0 2309 100 3 0 chr2 68915991 68916290 -181771564 + AluSx SINE Alu 1 300 -12 2146 115 0 20 chr2 68916979 68917146 -181770708 - AluSp SINE Alu -15 298 138 2353 86 0 0 chr2 68917146 68917438 -181770416 - AluSp SINE Alu -21 292 1 2146 115 0 20 chr2 68917438 68917574 -181770280 - AluSp SINE Alu -175 138 1 1149 193 80 111 chr2 68917585 68917794 -181770060 - L1ME3A LINE L1 -273 5897 5683 2278 96 10 0 chr2 68917794 68918086 -181769768 + AluSq SINE Alu 1 295 -18 1149 193 80 111 chr2 68918086 68918174 -181769680 - L1ME3A LINE L1 -487 5683 5594 285 29 0 0 chr2 68918174 68918208 -181769646 + (TG)n Simple_repeat Simple_repeat 2 35 0 1149 193 80 111 chr2 68918208 68918275 -181769579 - L1ME3A LINE L1 -576 5594 5526 1625 152 41 11 chr2 68918275 68918545 -181769309 - AluJo SINE Alu -26 286 9 1149 193 80 111 chr2 68918545 68918598 -181769256 - L1ME3A LINE L1 -644 5526 5493 1631 160 88 9 chr2 68918598 68918917 -181768937 - MER2 DNA MER2_type 0 344 1 1149 193 80 111 chr2 68918917 68918983 -181768871 - L1ME3A LINE L1 -677 5493 5426 1226 198 18 18 chr2 68918990 68919268 -181768586 - L1ME3A LINE L1 -9 6161 5884 2222 124 3 0 chr2 68919324 68919631 -181768223 - AluSg SINE Alu -2 308 1 48 27 0 14 chr2 68919873 68919929 -181767925 + AT_rich Low_complexity Low_complexity 1 57 -15 2115 133 3 0 chr2 68919929 68920231 -181767623 - AluSx SINE Alu -9 303 1 48 27 0 14 chr2 68920231 68920247 -181767607 + AT_rich Low_complexity Low_complexity 57 72 0 2319 100 0 3 chr2 68920341 68920641 -181767213 - AluSq SINE Alu -14 299 1 292 324 36 32 chr2 68920729 68920979 -181766875 + L1ME LINE L1 5552 5802 -319 826 172 40 13 chr2 68920995 68921146 -181766708 + FRAM SINE Alu 1 150 -26 294 29 0 0 chr2 68921147 68921182 -181766672 + (CA)n Simple_repeat Simple_repeat 2 36 0 392 228 97 9 chr2 68921276 68921390 -181766464 - MIR SINE MIR -70 192 69 2484 70 3 0 chr2 68921401 68921699 -181766155 - AluSp SINE Alu -14 299 1 388 269 6 58 chr2 68921737 68921809 -181766045 - MER103 DNA DNA -3 163 89 6931 175 113 58 chr2 68921809 68922310 -181765544 - MER52A LTR ERV1 0 1755 1283 306 0 0 0 chr2 68922310 68922344 -181765510 + (TG)n Simple_repeat Simple_repeat 2 35 0 6931 175 113 58 chr2 68922344 68922381 -181765473 - MER52A LTR ERV1 -472 1283 1249 2174 122 3 0 chr2 68922381 68922675 -181765179 - AluSx SINE Alu -17 295 1 6931 175 113 58 chr2 68922675 68923057 -181764797 - MER52A LTR ERV1 -506 1249 889 2467 71 0 0 chr2 68923057 68923352 -181764502 - AluY SINE Alu -16 295 1 6931 175 113 58 chr2 68923352 68924093 -181763761 - MER52A LTR ERV1 -866 889 1 388 269 6 58 chr2 68924093 68924191 -181763663 - MER103 DNA DNA -77 89 2 1940 123 46 20 chr2 68924397 68924699 -181763155 + AluSx SINE Alu 1 310 -2 1597 162 26 36 chr2 68924932 68925234 -181762620 + AluJo SINE Alu 11 309 -3 630 140 0 0 chr2 68925315 68925408 -181762446 - AluJb SINE Alu -8 304 212 329 188 0 0 chr2 68925410 68925474 -181762380 - L1MC5 LINE L1 -107 7854 7791 198 0 0 0 chr2 68925927 68925949 -181761905 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1807 122 63 7 chr2 68925956 68926227 -181761627 - AluSx SINE Alu -26 286 1 189 267 0 0 chr2 68926370 68926415 -181761439 - MIR SINE MIR -208 54 10 1879 126 141 25 chr2 68926415 68926741 -181761113 + THE1B LTR MaLR 1 364 0 1749 115 4 0 chr2 68926741 68926994 -181760860 + THE1B-int LTR MaLR 1 254 -1326 2486 99 6 30 chr2 68926994 68927288 -181760566 + THE1A LTR MaLR 1 286 -69 2407 95 0 0 chr2 68927288 68927584 -181760270 - AluSg SINE Alu -14 296 1 2486 99 6 30 chr2 68927584 68927653 -181760201 + THE1A LTR MaLR 286 355 0 8114 97 1 11 chr2 68927658 68928150 -181759704 + THE1A-int LTR MaLR 6 501 -1079 2318 113 7 0 chr2 68928150 68928459 -181759395 + AluSp SINE Alu 1 311 -2 8114 97 1 11 chr2 68928459 68929071 -181758783 + THE1A-int LTR MaLR 501 1099 -481 1405 200 35 87 chr2 68929240 68929556 -181758298 + L1MC5 LINE L1 6640 6928 -1033 3020 36 22 0 chr2 68929556 68929917 -181757937 + L1PA3 LINE L1 5787 6155 0 1405 200 35 87 chr2 68929917 68930035 -181757819 + L1MC5 LINE L1 6928 7051 -910 22 0 0 0 chr2 68930444 68930466 -181757388 + AT_rich Low_complexity Low_complexity 1 22 0 2088 100 0 78 chr2 68930490 68930677 -181757177 - AluSp SINE Alu -16 297 144 2498 76 3 6 chr2 68930677 68930991 -181756863 - AluSp SINE Alu 0 313 1 2088 100 0 78 chr2 68930991 68931124 -181756730 - AluSp SINE Alu -169 144 2 565 270 27 11 chr2 68931129 68931314 -181756540 - MIR SINE MIR -69 193 6 1793 135 0 63 chr2 68931671 68931884 -181755970 - AluJb SINE Alu 0 339 155 2212 86 3 30 chr2 68931884 68932186 -181755668 - AluSg SINE Alu -16 294 1 1793 135 0 63 chr2 68932186 68932332 -181755522 - AluJb SINE Alu -184 155 1 2067 84 54 20 chr2 68932682 68932978 -181754876 - AluSq SINE Alu -7 306 1 1123 211 89 103 chr2 68933703 68933966 -181753888 - L1ME3 LINE L1 -21 6141 5876 2490 87 0 0 chr2 68933966 68934277 -181753577 - AluY SINE Alu 0 311 1 1123 211 89 103 chr2 68934277 68934390 -181753464 - L1ME3 LINE L1 -286 5876 5771 1871 161 0 26 chr2 68934390 68934701 -181753153 - AluJb SINE Alu -9 303 1 1123 211 89 103 chr2 68934701 68934807 -181753047 - L1ME3 LINE L1 -391 5771 5665 278 203 0 14 chr2 68934810 68934884 -181752970 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 246 128 0 0 chr2 68934884 68934923 -181752931 + (CA)n Simple_repeat Simple_repeat 2 40 0 472 258 38 6 chr2 68935606 68935765 -181752089 + L2 LINE L2 2364 2527 -787 1645 168 26 26 chr2 68935901 68936205 -181751649 - AluJb SINE Alu -8 304 1 1707 178 3 47 chr2 68936550 68936706 -181751148 + L1MB8 LINE L1 1 137 -6893 2386 79 0 0 chr2 68936706 68936998 -181750856 + AluY SINE Alu 19 310 -1 1707 178 3 47 chr2 68936998 68937162 -181750692 + L1MB8 LINE L1 137 307 -6723 973 144 122 16 chr2 68937172 68937360 -181750494 + AluJo SINE Alu 91 298 -14 745 214 64 0 chr2 68937365 68937505 -181750349 + MER82 DNA MER2_type 483 631 -22 4992 179 43 30 chr2 68937525 68938260 -181749594 + L1MB8 LINE L1 5371 6096 -1042 1609 177 64 0 chr2 68938260 68938552 -181749302 + AluJb SINE Alu 1 309 0 4992 179 43 30 chr2 68938552 68939196 -181748658 + L1MB8 LINE L1 6096 6731 -407 2152 130 3 0 chr2 68939196 68939495 -181748359 + AluSq SINE Alu 1 300 -13 4992 179 43 30 chr2 68939495 68939731 -181748123 + L1MB8 LINE L1 6731 7120 -18 1961 124 3 14 chr2 68939731 68940014 -181747840 - AluSx SINE Alu -20 292 13 4992 179 43 30 chr2 68940014 68940034 -181747820 + L1MB8 LINE L1 7120 7138 0 345 196 116 36 chr2 68942048 68942160 -181745694 + L1ME LINE L1 5591 5711 -410 2126 108 0 0 chr2 68942283 68942561 -181745293 - AluSq SINE Alu -35 278 1 255 61 0 0 chr2 68942675 68942708 -181745146 + (CA)n Simple_repeat Simple_repeat 2 34 0 1735 129 31 35 chr2 68943009 68943296 -181744558 + AluJo SINE Alu 1 286 -26 228 259 111 25 chr2 68943317 68943398 -181744456 - MLT1K LTR MaLR -375 213 126 2388 70 0 0 chr2 68943489 68943776 -181744078 - AluY SINE Alu -24 287 1 464 250 8 38 chr2 68944214 68944346 -181743508 + MLT1K LTR MaLR 2 129 -459 265 264 35 11 chr2 68944345 68944432 -181743422 + MLT1L LTR MaLR 150 238 -377 * 15738 147 14 2 chr2 68944432 68946805 -181741049 + L1 LINE L1 9 2407 -5158 11277 151 13 107 chr2 68946809 68948976 -181738878 + L1 LINE L1 3729 5850 -1715 1268 176 0 34 chr2 68948976 68949209 -181738645 + AluJo SINE Alu 85 309 -3 11277 151 13 107 chr2 68949209 68949505 -181738349 + L1 LINE L1 5850 6172 -1393 862 131 0 0 chr2 68949823 68949945 -181737909 + FLAM_C SINE Alu 2 123 -10 862 157 290 5 chr2 68949948 68950165 -181737689 + L1 LINE L1 6151 6429 -1136 744 256 48 22 chr2 68950213 68950440 -181737414 + MLT1K LTR MaLR 311 543 -45 2444 115 15 10 chr2 68950481 68950872 -181736982 + L1MA8 LINE L1 5898 6290 -1 1753 136 64 25 chr2 68952316 68952596 -181735258 + AluJo SINE Alu 1 291 -21 231 257 0 0 chr2 68952609 68952679 -181735175 + L1ME1 LINE L1 6091 6160 -6 2289 116 0 0 chr2 68952891 68953193 -181734661 + AluSx SINE Alu 2 303 -9 235 224 119 45 chr2 68953213 68953347 -181734507 + L1ME4a LINE L1 5967 6110 -11 702 266 39 108 chr2 68953364 68954060 -181733794 - L1MC5 LINE L1 -44 7917 7270 279 304 71 11 chr2 68954091 68954275 -181733579 + L3 LINE CR1 760 954 -623 2607 58 3 0 chr2 68954275 68954585 -181733269 + AluY SINE Alu 1 311 0 1531 156 42 65 chr2 68954666 68954974 -181732880 - AluSx SINE Alu -11 301 1 215 235 235 12 chr2 68955020 68955105 -181732749 + MIR SINE MIR 13 116 -146 448 271 110 29 chr2 68955180 68955450 -181732404 + L1ME3 LINE L1 5634 5925 -243 3741 192 46 64 chr2 68955517 68956459 -181731395 - L1MD2 LINE L1 -3 6356 5432 1745 183 23 0 chr2 68956459 68956760 -181731094 - AluJo SINE Alu -4 308 1 823 163 7 7 chr2 68956760 68956895 -181730959 - AluJo SINE Alu -177 135 1 454 65 0 0 chr2 68956895 68956957 -181730897 - L1MC/D LINE L1 -802 5440 5379 2427 97 0 0 chr2 68957117 68957427 -181730427 + AluSq SINE Alu 1 310 -3 772 137 15 0 chr2 68957428 68957559 -181730295 + L1MA4 LINE L1 6167 6299 -1 1958 175 0 0 chr2 68957847 68958156 -181729698 - AluSx SINE Alu -3 309 1 800 148 16 0 chr2 68958169 68958297 -181729557 - FLAM_C SINE Alu -1 132 3 219 69 0 0 chr2 68959216 68959245 -181728609 + (CA)n Simple_repeat Simple_repeat 1 29 0 812 222 87 96 chr2 68959248 68959645 -181728209 - HAL1 LINE L1 -34 2473 2074 190 0 0 0 chr2 68959645 68959666 -181728188 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2033 104 22 0 chr2 68959666 68959944 -181727910 - AluSx SINE Alu -28 284 1 812 222 87 96 chr2 68959944 68960006 -181727848 - HAL1 LINE L1 -432 2075 2014 2245 110 0 22 chr2 68960006 68960323 -181727531 - AluSq SINE Alu 0 313 1 812 222 87 96 chr2 68960323 68960414 -181727440 - HAL1 LINE L1 -493 2014 1926 261 57 0 0 chr2 68960423 68960458 -181727396 + (GA)n Simple_repeat Simple_repeat 1 35 0 378 290 89 18 chr2 68960471 68960640 -181727214 - HAL1 LINE L1 -678 1829 1649 22 56 0 0 chr2 68960640 68960676 -181727178 + AT_rich Low_complexity Low_complexity 1 36 0 868 208 6 6 chr2 68960741 68960900 -181726954 + FRAM SINE Alu 17 175 -1 21 0 0 0 chr2 68960901 68960922 -181726932 + AT_rich Low_complexity Low_complexity 1 21 0 252 212 51 93 chr2 68960944 68961062 -181726792 - HAL1 LINE L1 -1696 811 699 334 330 96 9 chr2 68961164 68961394 -181726460 - HAL1 LINE L1 -1913 594 345 323 223 47 112 chr2 68961397 68961630 -181726224 - HAL1 LINE L1 -2231 276 59 299 270 270 34 chr2 68961700 68961848 -181726006 + L2 LINE L2 2735 2917 -397 1640 259 32 57 chr2 68961887 68962393 -181725461 + MLT1J LTR MaLR 5 497 -14 515 249 144 23 chr2 68962462 68962635 -181725219 + L2 LINE L2 3114 3307 -6 1561 135 24 74 chr2 68962843 68963168 -181724686 + AluJb SINE Alu 1 310 0 242 355 25 16 chr2 68963219 68963340 -181724514 + MIR SINE MIR 15 136 -126 214 143 48 0 chr2 68963342 68963384 -181724470 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 275 359 38 30 chr2 68963429 68963560 -181724294 - MIR SINE MIR -127 135 4 4645 149 34 68 chr2 68963864 68964561 -181723293 - L1MB7 LINE L1 -9 6175 5456 2648 35 0 16 chr2 68964561 68964873 -181722981 + AluY SINE Alu 1 307 -4 4645 149 34 68 chr2 68964873 68965057 -181722797 - L1MB7 LINE L1 -728 5456 5267 1048 173 0 18 chr2 68965057 68965225 -181722629 - FRAM SINE Alu -1 165 1 4645 149 34 68 chr2 68965225 68965583 -181722271 - L1MB7 LINE L1 -917 5267 4959 1787 158 7 0 chr2 68965601 68965874 -181721980 + AluSx SINE Alu 1 275 -37 192 40 0 0 chr2 68965880 68965905 -181721949 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 2286 116 3 3 chr2 68965905 68966215 -181721639 + AluSg SINE Alu 1 310 0 235 200 0 0 chr2 68966447 68966492 -181721362 + L1MC4 LINE L1 7202 7246 -796 726 259 38 44 chr2 68966519 68966823 -181721031 + L1MC5 LINE L1 7261 7477 -484 1570 179 21 11 chr2 68966823 68967103 -181720751 + AluJo SINE Alu 1 283 -29 726 259 38 44 chr2 68967103 68967203 -181720651 + L1MC5 LINE L1 7477 7576 -385 815 130 0 0 chr2 68967207 68967322 -181720532 - L1M4 LINE L1 -513 5665 5551 1847 140 40 0 chr2 68967343 68967646 -181720208 + AluSx SINE Alu 1 314 0 2179 129 3 0 chr2 68967781 68968084 -181719770 - AluSx SINE Alu -7 305 2 3322 149 16 5 chr2 68968115 68968666 -181719188 + L1MA4 LINE L1 5604 6160 -140 613 153 0 107 chr2 68968743 68968874 -181718980 + FLAM_C SINE Alu 1 117 -16 454 181 19 0 chr2 68968874 68968979 -181718875 + CT-rich Low_complexity Low_complexity 1 107 0 734 139 0 0 chr2 68968979 68969087 -181718767 - AluSx SINE Alu 0 309 202 942 157 0 0 chr2 68969092 68969232 -181718622 - AluSx SINE Alu -172 140 1 207 103 0 26 chr2 68969250 68969289 -181718565 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 230 286 66 33 chr2 68969364 68969457 -181718397 + MIR SINE MIR 13 107 -102 1944 224 88 21 chr2 68969459 68970110 -181717744 - L1MB7 LINE L1 0 6184 5578 2078 95 7 7 chr2 68970110 68970426 -181717428 - AluSx SINE Alu 0 316 1 1944 224 88 21 chr2 68970426 68970616 -181717238 - L1MB7 LINE L1 -606 5578 5402 2429 90 10 0 chr2 68970616 68970926 -181716928 - AluSq SINE Alu 0 313 1 1944 224 88 21 chr2 68970926 68970998 -181716856 - L1MB7 LINE L1 -782 5402 5336 1718 155 56 0 chr2 68970998 68971282 -181716572 - AluJb SINE Alu 0 312 13 1944 224 88 21 chr2 68971282 68971818 -181716036 - L1MB7 LINE L1 -848 5336 4628 2235 85 14 0 chr2 68971818 68972112 -181715742 - AluSx SINE Alu -12 300 3 299 234 262 7 chr2 68972954 68973099 -181714755 - MIR SINE MIR -60 202 21 354 269 58 0 chr2 68973237 68973341 -181714513 + L1MC4a LINE L1 6555 6664 -1144 21 0 0 0 chr2 68974388 68974409 -181713445 + AT_rich Low_complexity Low_complexity 1 21 0 2151 71 0 18 chr2 68974782 68975062 -181712792 + AluSq SINE Alu 23 297 -16 2544 56 16 0 chr2 68975437 68975741 -181712113 + AluSx SINE Alu 1 309 -3 28 48 0 0 chr2 68976173 68976215 -181711639 + AT_rich Low_complexity Low_complexity 1 42 0 1949 150 3 0 chr2 68976367 68976674 -181711180 - AluJb SINE Alu -4 308 1 2174 105 7 0 chr2 68976735 68977029 -181710825 + AluSx SINE Alu 1 296 -16 779 206 0 7 chr2 68977517 68977653 -181710201 + FLAM_C SINE Alu 2 136 -7 1288 78 209 5 chr2 68977721 68977912 -181709942 + MER30 DNA MER1_type 1 230 0 2135 122 3 0 chr2 68978961 68979257 -181708597 - AluSx SINE Alu -15 297 1 820 152 16 8 chr2 68979337 68979462 -181708392 + FLAM_C SINE Alu 2 127 -16 32 0 0 0 chr2 68979462 68979494 -181708360 + AT_rich Low_complexity Low_complexity 1 32 0 419 77 0 0 chr2 68979497 68979549 -181708305 - MER66B LTR ERV1 -140 346 295 2126 130 3 16 chr2 68979558 68979874 -181707980 - AluSx SINE Alu 0 312 1 1660 169 0 30 chr2 68979874 68980175 -181707679 - AluJo SINE Alu -20 292 1 230 81 27 0 chr2 68981133 68981170 -181706684 + (TG)n Simple_repeat Simple_repeat 2 39 0 2122 111 0 0 chr2 68981438 68981738 -181706116 + AluSg SINE Alu 1 300 0 1996 97 68 0 chr2 68982036 68982314 -181705540 + AluSx SINE Alu 1 297 -15 1558 140 4 21 chr2 68982503 68982789 -181705065 - AluSx SINE Alu 0 312 58 21 0 0 0 chr2 68982946 68982967 -181704887 + AT_rich Low_complexity Low_complexity 1 21 0 329 238 0 0 chr2 68983022 68983085 -181704769 - L2 LINE L2 -19 3294 3232 1259 182 131 33 chr2 68983230 68983505 -181704349 - AluJb SINE Alu -9 303 2 1580 174 4 25 chr2 68983534 68983671 -181704183 + AluJo SINE Alu 2 131 -181 1864 123 29 45 chr2 68983671 68983981 -181703873 + AluSx SINE Alu 2 306 -6 1580 174 4 25 chr2 68983981 68984124 -181703730 + AluJo SINE Alu 131 276 -36 32 26 0 0 chr2 68984130 68984169 -181703685 + AT_rich Low_complexity Low_complexity 1 39 0 2498 54 7 0 chr2 68984341 68984638 -181703216 + AluY SINE Alu 1 299 -12 2291 92 0 3 chr2 68984648 68984943 -181702911 + AluSq SINE Alu 1 294 -19 2444 77 3 0 chr2 68985137 68985437 -181702417 + AluSp SINE Alu 2 302 -11 318 352 16 0 chr2 68985457 68985585 -181702269 - L2 LINE L2 0 3313 3184 2217 113 7 0 chr2 68988963 68989263 -181698591 + AluSg SINE Alu 2 303 -7 1551 185 18 14 chr2 68989311 68989592 -181698262 + AluJo SINE Alu 1 282 -30 306 283 53 75 chr2 68990372 68990559 -181697295 - L1MC4 LINE L1 -29 8013 7831 1984 139 24 3 chr2 68990629 68990923 -181696931 + AluJb SINE Alu 1 300 -12 2288 107 0 0 chr2 68991201 68991490 -181696364 + AluSx SINE Alu 1 289 -23 266 254 151 63 chr2 68992819 68992945 -181694909 - L2 LINE L2 -21 3292 3156 1751 127 190 30 chr2 68993075 68993270 -181694584 - Tigger2 DNA MER2_type 0 2718 2555 2546 54 0 0 chr2 68993270 68993567 -181694287 + AluY SINE Alu 1 297 -14 1751 127 190 30 chr2 68993567 68993792 -181694062 - Tigger2 DNA MER2_type -163 2555 1 950 301 146 7 chr2 68993857 68994082 -181693772 - L2 LINE L2 -275 3038 2846 2215 109 0 3 chr2 68994082 68994376 -181693478 + AluSg SINE Alu 1 293 -17 950 301 146 7 chr2 68994376 68994605 -181693249 - L2 LINE L2 -467 2846 2517 2126 111 44 0 chr2 68994707 68995004 -181692850 + AluSx SINE Alu 1 310 -2 2508 60 0 0 chr2 68996046 68996345 -181691509 + AluY SINE Alu 1 299 -12 2381 105 0 0 chr2 68996356 68996660 -181691194 + AluSg SINE Alu 1 304 -6 2183 121 3 0 chr2 68997334 68997623 -181690231 - AluSp SINE Alu -22 291 2 189 129 21 194 chr2 68997916 68998009 -181689845 - L2 LINE L2 -8 3264 3188 2348 88 0 31 chr2 68998322 68998642 -181689212 + AluY SINE Alu 1 310 -1 1155 217 14 5 chr2 68998650 68998867 -181688987 + AluJo SINE Alu 1 219 -93 1942 146 0 19 chr2 68999122 68999430 -181688424 + AluJb SINE Alu 2 303 -9 25 0 0 0 chr2 69000461 69000486 -181687368 + AT_rich Low_complexity Low_complexity 1 25 0 557 229 257 6 chr2 69000534 69000709 -181687145 + MER20 DNA MER1_type 1 219 0 267 268 14 0 chr2 69001035 69001106 -181686748 - L2 LINE L2 -2 3311 3240 261 156 260 26 chr2 69002049 69002126 -181685728 + MER103 DNA DNA 58 152 -14 2312 92 3 3 chr2 69002553 69002859 -181684995 + AluSx SINE Alu 1 306 -6 7250 60 0 3 chr2 69002912 69004024 -181683830 - L1PA7 LINE L1 -3 6151 5037 223 239 0 30 chr2 69004244 69004257 -181683597 + (TA)n Simple_repeat Simple_repeat 1 13 -52 1898 142 0 42 chr2 69004257 69004567 -181683287 + AluJo SINE Alu 1 297 -15 223 239 0 30 chr2 69004567 69004620 -181683234 + (TA)n Simple_repeat Simple_repeat 13 65 0 822 167 0 21 chr2 69004930 69005074 -181682780 - AluJb SINE Alu -9 303 163 1767 174 10 3 chr2 69005105 69005393 -181682461 + AluJo SINE Alu 1 290 -22 2053 134 0 3 chr2 69005409 69005701 -181682153 + AluSx SINE Alu 1 291 -21 2044 121 11 0 chr2 69006189 69006470 -181681384 + AluSx SINE Alu 1 284 -28 2461 73 0 3 chr2 69006882 69007182 -181680672 - AluY SINE Alu -12 299 1 568 264 132 9 chr2 69007651 69007874 -181679980 - L1MD3 LINE L1 -7 8034 7795 * 2717 92 50 41 chr2 69007853 69008376 -181679478 - L1M2 LINE L1 -605 5686 5163 1726 134 7 48 chr2 69008376 69008666 -181679188 - AluSx SINE Alu -6 306 29 2717 92 50 41 chr2 69008666 69008705 -181679149 - L1M2 LINE L1 -1128 5163 5126 291 286 0 0 chr2 69008684 69008747 -181679107 - L1MC/D LINE L1 -2197 5611 5549 * 367 218 26 0 chr2 69008752 69008830 -181679024 - L1MC/D LINE L1 -2338 5470 5391 1579 174 3 31 chr2 69008830 69009118 -181678736 + AluJo SINE Alu 3 282 -30 29 47 0 0 chr2 69009144 69009187 -181678667 + AT_rich Low_complexity Low_complexity 1 43 0 945 130 68 0 chr2 69009201 69009347 -181678507 - AluSc SINE Alu -19 290 135 2251 73 0 54 chr2 69009910 69010226 -181677628 + AluSg SINE Alu 1 299 -11 955 236 166 31 chr2 69012230 69012898 -181674956 - L2 LINE L2 -2 3311 2559 375 230 170 7 chr2 69012904 69013039 -181674815 - L2 LINE L2 -2008 1306 1150 577 255 74 63 chr2 69013055 69013287 -181674567 - L2 LINE L2 -2721 593 356 546 202 136 94 chr2 69013287 69013500 -181674354 + MER58A DNA MER1_type 2 223 -1 577 255 74 63 chr2 69013500 69013538 -181674316 - L2 LINE L2 -2958 356 320 252 0 0 0 chr2 69014015 69014043 -181673811 + (T)n Simple_repeat Simple_repeat 1 28 0 1913 64 9 4 chr2 69014054 69014287 -181673567 - AluY SINE Alu -77 234 1 402 252 49 32 chr2 69014401 69014524 -181673330 + MER94 DNA DNA 1 125 -9 194 200 0 0 chr2 69014544 69014579 -181673275 + MIR SINE MIR 89 123 -139 30 0 0 0 chr2 69017125 69017155 -181670699 + AT_rich Low_complexity Low_complexity 1 30 0 2458 54 14 0 chr2 69018200 69018494 -181669360 - AluSp SINE Alu -15 298 1 2083 115 7 3 chr2 69019468 69019763 -181668091 + AluSp SINE Alu 1 296 -17 1902 109 19 4 chr2 69019990 69020247 -181667607 + AluSx SINE Alu 24 284 -28 2164 91 23 26 chr2 69020860 69021167 -181666687 + AluSx SINE Alu 1 306 -6 252 260 52 0 chr2 69023180 69023257 -181664597 - MER5A DNA MER1_type 0 189 109 392 254 145 12 chr2 69023802 69023996 -181663858 - MIR SINE MIR -9 253 38 2129 98 3 58 chr2 69025574 69025902 -181661952 - AluSx SINE Alu -1 311 2 2525 54 0 3 chr2 69026272 69026569 -181661285 + AluY SINE Alu 1 296 -15 2263 78 3 3 chr2 69026881 69027187 -181660667 + AluSp SINE Alu 1 306 0 1505 207 0 0 chr2 69027215 69027500 -181660354 + AluJb SINE Alu 12 296 -16 2423 89 0 3 chr2 69027542 69027844 -181660010 + AluSq SINE Alu 1 301 -12 442 247 11 0 chr2 69028098 69028276 -181659578 + CT-rich Low_complexity Low_complexity 1 180 0 278 189 19 0 chr2 69028289 69028342 -181659512 + C-rich Low_complexity Low_complexity 6 59 0 470 309 0 22 chr2 69028693 69028829 -181659025 + LTR67 LTR ERVL 2 134 -423 458 303 63 33 chr2 69028860 69029193 -181658661 + LTR67 LTR ERVL 215 557 0 902 176 13 0 chr2 69029460 69029613 -181658241 + FAM SINE Alu 4 158 -17 1893 118 73 0 chr2 69029670 69029942 -181657912 + AluSx SINE Alu 10 301 -11 402 239 99 0 chr2 69029993 69030135 -181657719 - MIR SINE MIR -50 212 57 832 149 0 0 chr2 69030216 69030337 -181657517 + AluSq/x SINE Alu 1 121 -191 1337 197 67 31 chr2 69030445 69030805 -181657049 + L1MC4 LINE L1 7533 7905 -137 2405 68 7 0 chr2 69030813 69031108 -181656746 - AluY SINE Alu -14 297 1 25 46 0 46 chr2 69031163 69031200 -181656654 + AT_rich Low_complexity Low_complexity 1 35 -27 1905 121 36 0 chr2 69031200 69031481 -181656373 - AluSx SINE Alu -18 294 4 25 46 0 46 chr2 69031481 69031508 -181656346 + AT_rich Low_complexity Low_complexity 35 62 0 1835 178 103 48 chr2 69032261 69032505 -181655349 - Charlie1a DNA MER1_type -2238 523 294 2374 91 3 0 chr2 69032505 69032803 -181655051 - AluSp SINE Alu -14 299 1 1835 178 103 48 chr2 69032803 69033013 -181654841 - Charlie1a DNA MER1_type -2467 294 44 324 70 0 0 chr2 69033048 69033091 -181654763 + (A)n Simple_repeat Simple_repeat 1 43 0 968 113 0 0 chr2 69033251 69033375 -181654479 + FLAM_C SINE Alu 1 124 -19 299 294 85 26 chr2 69033583 69033736 -181654118 + HAL1b LINE L1 420 581 -767 303 252 0 45 chr2 69034005 69034116 -181653738 + L1MC4a LINE L1 5802 5907 -1901 203 244 0 0 chr2 69034158 69034199 -181653655 + (CA)n Simple_repeat Simple_repeat 2 42 0 1768 169 15 76 chr2 69034268 69034675 -181653179 + MLT1B LTR MaLR 1 382 -8 2110 124 0 0 chr2 69034712 69035014 -181652840 - AluSx SINE Alu 0 302 1 1880 136 7 11 chr2 69035278 69035602 -181652252 - AluSx SINE Alu 0 323 1 1514 158 82 35 chr2 69035607 69035658 -181652196 + Charlie1a DNA MER1_type 885 932 -1829 2152 132 0 0 chr2 69035658 69035954 -181651900 - AluSq SINE Alu -17 296 1 1514 158 82 35 chr2 69035954 69036244 -181651610 + Charlie1a DNA MER1_type 932 1242 -213 805 198 19 12 chr2 69036244 69036406 -181651448 - FRAM SINE Alu -13 163 1 285 139 0 0 chr2 69036407 69036450 -181651404 + Charlie1a DNA MER1_type 1396 1438 -17 468 35 0 0 chr2 69037169 69037227 -181650627 + (TC)n Simple_repeat Simple_repeat 2 59 0 336 180 153 18 chr2 69038980 69039091 -181648763 - MIR SINE MIR -71 191 66 418 156 0 0 chr2 69039125 69039189 -181648665 - MER2 DNA MER2_type -1 344 281 2246 100 3 13 chr2 69039198 69039499 -181648355 + AluSq SINE Alu 1 298 -15 1898 156 7 19 chr2 69039547 69039855 -181647999 + AluJb SINE Alu 1 304 -8 695 89 139 0 chr2 69039876 69039977 -181647877 - MER2 DNA MER2_type -223 122 8 182 315 14 14 chr2 69040313 69040386 -181647468 + MIR SINE MIR 99 171 -91 423 0 0 0 chr2 69040786 69040833 -181647021 + (CA)n Simple_repeat Simple_repeat 2 48 0 398 260 13 97 chr2 69044780 69044878 -181642976 + MIR3 SINE MIR 65 147 -61 508 253 99 25 chr2 69044878 69045040 -181642814 + MER5B DNA MER1_type 3 176 -2 398 260 13 97 chr2 69045040 69045095 -181642759 + MIR3 SINE MIR 147 205 -3 419 261 108 17 chr2 69045391 69045567 -181642287 - MER117 DNA MER1_type 0 197 6 25 0 0 0 chr2 69045744 69045769 -181642085 + AT_rich Low_complexity Low_complexity 1 25 0 716 230 42 55 chr2 69045852 69046069 -181641785 + MIR SINE MIR 46 259 -3 542 267 114 0 chr2 69046328 69046504 -181641350 + MER20B DNA MER1_type 9 204 -579 2172 105 3 14 chr2 69046627 69046923 -181640931 - AluSx SINE Alu -19 293 1 1402 155 7 72 chr2 69047173 69047464 -181640390 - AluSx SINE Alu 0 312 41 1970 239 190 25 chr2 69047584 69048566 -181639288 + L2 LINE L2 411 1554 -1760 381 337 41 6 chr2 69048566 69048738 -181639116 + L2 LINE L2 2208 2385 -929 947 261 244 12 chr2 69048738 69049384 -181638470 + L2 LINE L2 2510 3294 -19 2144 91 39 3 chr2 69049433 69049719 -181638135 + AluSq SINE Alu 1 296 -17 2123 121 0 10 chr2 69049939 69050246 -181637608 + AluSc SINE Alu 1 304 -5 183 42 0 0 chr2 69050326 69050350 -181637504 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 190 204 0 68 chr2 69051841 69051885 -181635969 + MIR SINE MIR 110 150 -58 2269 116 0 0 chr2 69053533 69053836 -181634018 - AluSq SINE Alu -10 303 1 1451 170 0 4 chr2 69056397 69056627 -181631227 + AluSq SINE Alu 1 229 -84 292 290 19 77 chr2 69057139 69057346 -181630508 + L1MC4 LINE L1 7831 8025 -17 198 0 0 0 chr2 69057499 69057521 -181630333 + (T)n Simple_repeat Simple_repeat 1 22 0 2252 114 0 7 chr2 69057672 69057979 -181629875 + AluSx SINE Alu 1 305 -7 246 326 76 23 chr2 69058354 69058486 -181629368 - MIR3 SINE MIR -31 177 39 307 240 13 27 chr2 69058849 69058924 -181628930 + MIR3 SINE MIR 114 187 -21 1054 90 0 0 chr2 69060610 69060744 -181627110 + AluYb8 SINE Alu 1 134 -184 2355 106 0 0 chr2 69060745 69061057 -181626797 + AluSx SINE Alu 1 312 0 227 211 19 0 chr2 69061328 69061380 -181626474 - L1M1 LINE L1 -659 5645 5593 843 142 39 26 chr2 69061417 69061572 -181626282 + L1MB1 LINE L1 5777 5933 -235 532 153 0 12 chr2 69061794 69061879 -181625975 + FLAM_C SINE Alu 35 118 -25 299 239 30 0 chr2 69063162 69063229 -181624625 - MER112 DNA MER1_type -9 251 183 280 336 101 9 chr2 69063232 69063449 -181624405 - L1ME3A LINE L1 -1 6169 5933 357 224 126 49 chr2 69063478 69063621 -181624233 - MER112 DNA MER1_type -78 182 29 2080 93 25 4 chr2 69064466 69064765 -181623089 - AluY SINE Alu 0 305 1 415 287 14 7 chr2 69065226 69065369 -181622485 + MIR SINE MIR 98 241 -21 2187 120 0 0 chr2 69066038 69066390 -181621464 + AluSx SINE Alu 1 312 0 2135 99 85 23 chr2 69066799 69067141 -181620713 + THE1B LTR MaLR 1 363 -1 25 31 0 0 chr2 69067459 69067491 -181620363 + AT_rich Low_complexity Low_complexity 1 32 0 1549 156 97 4 chr2 69067494 69067751 -181620103 - AluJb SINE Alu -27 285 5 340 205 71 27 chr2 69068264 69068376 -181619478 + MLT1K LTR MaLR 446 562 -26 197 235 71 47 chr2 69068615 69068700 -181619154 - MIR SINE MIR -83 125 39 845 159 0 0 chr2 69070197 69070329 -181617525 + FLAM_C SINE Alu 2 133 0 244 325 127 6 chr2 69070407 69070564 -181617290 + MIR SINE MIR 17 192 -70 1997 138 0 7 chr2 69070590 69070881 -181616973 - AluSx SINE Alu -23 289 1 629 280 140 33 chr2 69070885 69071036 -181616818 - L1M4 LINE L1 -1778 4368 4235 378 0 0 0 chr2 69071036 69071078 -181616776 + (TC)n Simple_repeat Simple_repeat 2 43 0 225 0 0 0 chr2 69071077 69071102 -181616752 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 629 280 140 33 chr2 69071078 69071102 -181616752 - L1M4 LINE L1 -1911 4235 4215 2410 88 0 0 chr2 69071102 69071399 -181616455 - AluY SINE Alu -14 297 1 629 280 140 33 chr2 69071399 69071761 -181616093 - L1M4 LINE L1 -1931 4215 3799 1523 106 5 5 chr2 69071801 69072008 -181615846 - AluSg/x SINE Alu -12 298 92 1458 111 0 37 chr2 69072108 69072324 -181615530 + AluY SINE Alu 95 302 -9 2270 124 25 8 chr2 69072543 69072898 -181614956 - MER46B DNA MER2_type 0 236 1 1077 114 102 0 chr2 69073019 69073185 -181614669 - AluSg/x SINE Alu -9 301 119 766 190 54 78 chr2 69073253 69073374 -181614480 + MER20B DNA MER1_type 515 637 -146 966 134 114 35 chr2 69073374 69073576 -181614278 + MER20 DNA MER1_type 2 219 0 766 190 54 78 chr2 69073576 69073616 -181614238 + MER20B DNA MER1_type 637 676 -107 2286 101 3 0 chr2 69073616 69073913 -181613941 + AluSp SINE Alu 1 298 -15 766 190 54 78 chr2 69073913 69073992 -181613862 + MER20B DNA MER1_type 676 750 -33 267 242 20 61 chr2 69074649 69074748 -181613106 + MIR SINE MIR 53 147 -115 255 257 148 38 chr2 69075023 69075206 -181612648 - MIR SINE MIR -15 247 45 223 204 148 0 chr2 69075751 69075805 -181612049 - MIR SINE MIR -128 134 73 769 142 16 8 chr2 69076099 69076226 -181611628 - FLAM_C SINE Alu -1 132 5 201 283 19 0 chr2 69077070 69077123 -181610731 + MIR3 SINE MIR 142 195 -13 1267 235 114 12 chr2 69077224 69077769 -181610085 - L2 LINE L2 -5 3308 2712 189 0 0 0 chr2 69078462 69078483 -181609371 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2433 72 3 13 chr2 69078496 69078802 -181609052 - AluY SINE Alu -8 303 1 1710 143 92 11 chr2 69078805 69079078 -181608776 - AluSx SINE Alu -17 295 1 626 251 118 0 chr2 69079758 69079953 -181607901 - MIR SINE MIR -24 238 21 2104 112 0 7 chr2 69079988 69080303 -181607551 + AluSq SINE Alu 1 313 0 429 284 69 23 chr2 69080489 69080707 -181607147 - L1MC4a LINE L1 -1883 5925 5698 256 150 0 0 chr2 69081120 69081160 -181606694 - MIR SINE MIR -87 121 82 2350 55 39 42 chr2 69081349 69081659 -181606195 - AluY SINE Alu -2 309 1 2224 124 0 0 chr2 69081659 69081956 -181605898 - AluSx SINE Alu -14 298 1 521 251 143 44 chr2 69081990 69082332 -181605522 - MLT1J2 LTR MaLR -2 448 73 507 49 0 0 chr2 69083792 69083853 -181604001 - AluJ/FLAM SINE Alu -241 71 11 1876 134 0 49 chr2 69083908 69084215 -181603639 - AluJo SINE Alu -20 292 1 2556 71 0 0 chr2 69084773 69085081 -181602773 - AluSg SINE Alu -2 308 1 209 321 47 19 chr2 69085499 69085605 -181602249 + MIR SINE MIR 82 190 -72 254 330 0 0 chr2 69087292 69087380 -181600474 - MER112 DNA MER1_type -10 250 163 507 239 93 104 chr2 69087387 69087526 -181600328 + L1MC4 LINE L1 7691 7830 -212 1743 135 67 0 chr2 69087526 69087823 -181600031 - L1MC1 LINE L1 -1 6332 6016 507 239 93 104 chr2 69087823 69088039 -181599815 + L1MC4 LINE L1 7830 8042 0 733 174 0 58 chr2 69088187 69088325 -181599529 + FLAM_C SINE Alu 1 130 -3 569 212 9 0 chr2 69088661 69088774 -181599080 + MER81 DNA DNA 1 114 0 2317 83 23 3 chr2 69090047 69090348 -181597506 + AluSg SINE Alu 1 307 -3 1919 164 0 7 chr2 69093143 69093448 -181594406 + AluJb SINE Alu 10 312 0 2487 58 0 0 chr2 69093888 69094183 -181593671 + AluY SINE Alu 1 295 -16 272 156 16 31 chr2 69094776 69094840 -181593014 - L1MC1 LINE L1 -2009 5799 5737 424 134 61 12 chr2 69094915 69094997 -181592857 + Charlie1 DNA MER1_type 1985 2070 -691 3076 157 83 71 chr2 69095034 69095202 -181592652 + Charlie1 DNA MER1_type 2017 2181 -580 1139 0 0 55 chr2 69095202 69095383 -181592471 + (TCTCCC)n Simple_repeat Simple_repeat 2 172 0 9672 60 19 65 chr2 69095383 69096777 -181591077 + SVA Other Other 53 1382 -4 3076 157 83 71 chr2 69096777 69097342 -181590512 + Charlie1 DNA MER1_type 2180 2760 -1 423 285 69 26 chr2 69097344 69097588 -181590266 - L1MC1 LINE L1 -430 5691 5437 24 0 0 0 chr2 69097645 69097669 -181590185 + AT_rich Low_complexity Low_complexity 1 24 0 205 258 16 16 chr2 69098088 69098150 -181589704 + GA-rich Low_complexity Low_complexity 4 65 0 252 122 0 0 chr2 69098163 69098204 -181589650 + (TG)n Simple_repeat Simple_repeat 1 41 0 192 288 45 36 chr2 69098647 69098758 -181589096 + MIR SINE MIR 107 218 -44 21 36 0 0 chr2 69098958 69098986 -181588868 + AT_rich Low_complexity Low_complexity 1 28 0 517 122 14 87 chr2 69099204 69099560 -181588294 + (TATATG)n Simple_repeat Simple_repeat 1 329 0 729 165 0 24 chr2 69099889 69100016 -181587838 + FLAM_A SINE Alu 1 124 -9 2317 95 33 10 chr2 69100923 69101228 -181586626 + AluSx SINE Alu 1 312 0 2219 97 13 3 chr2 69102319 69102617 -181585237 - AluSq SINE Alu -10 303 3 2019 117 4 0 chr2 69103106 69103380 -181584474 + AluSq SINE Alu 39 313 0 419 70 0 0 chr2 69103386 69103443 -181584411 + Alu SINE Alu 2 58 -255 228 35 0 0 chr2 69103492 69103521 -181584333 + (T)n Simple_repeat Simple_repeat 1 29 0 1451 149 9 0 chr2 69103526 69103754 -181584100 + AluSp SINE Alu 77 306 -7 243 0 0 0 chr2 69106521 69106548 -181581306 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr2 69106797 69106817 -181581037 + (CAA)n Simple_repeat Simple_repeat 2 21 0 378 231 78 71 chr2 69107698 69107979 -181579875 + L1MC5 LINE L1 7659 7941 -20 412 224 72 33 chr2 69109070 69109222 -181578632 + L1MC4 LINE L1 7883 8040 -2 1773 156 25 7 chr2 69109296 69109578 -181578276 + AluJo SINE Alu 5 291 -21 333 118 0 0 chr2 69109745 69109796 -181578058 + (CA)n Simple_repeat Simple_repeat 2 52 0 425 308 88 18 chr2 69110576 69110803 -181577051 + MIR SINE MIR 1 243 -19 668 226 20 27 chr2 69110882 69111028 -181576826 + MER58B DNA MER1_type 195 339 -2 2208 107 17 0 chr2 69112288 69112588 -181575266 + AluSx SINE Alu 3 307 -5 418 284 103 9 chr2 69113636 69113752 -181574102 + MIR3 SINE MIR 32 158 -50 196 222 0 22 chr2 69116168 69116213 -181571641 - MIR SINE MIR -131 77 34 706 223 101 64 chr2 69117011 69117215 -181570639 - L1MC4a LINE L1 -1736 6072 5846 2426 55 0 0 chr2 69117215 69117506 -181570348 - AluY SINE Alu -20 291 1 706 223 101 64 chr2 69117506 69117677 -181570177 - L1MC4a LINE L1 -1962 5846 5683 756 206 34 34 chr2 69118686 69118919 -181568935 + L1MC5 LINE L1 7551 7783 -178 582 249 110 3 chr2 69119227 69119399 -181568455 - MER5B DNA MER1_type 0 178 5 307 276 65 48 chr2 69120081 69120260 -181567594 - MIR SINE MIR -65 143 12 426 263 109 60 chr2 69120854 69121120 -181566734 + MARNA DNA Mariner 86 364 -222 432 288 143 1 chr2 69121431 69121621 -181566233 - MIR SINE MIR -31 231 19 474 279 64 60 chr2 69121834 69122085 -181565769 + MIR SINE MIR 2 253 -9 1057 201 54 29 chr2 69123038 69123351 -181564503 - MER33 DNA MER1_type 0 324 4 764 197 10 98 chr2 69124903 69125096 -181562758 - MER45A DNA AcHobo 0 178 3 181 314 0 88 chr2 69125336 69125438 -181562416 + L2 LINE L2 3214 3306 -7 2235 83 7 3 chr2 69125462 69125764 -181562090 - AluSx SINE Alu -9 303 1 2342 85 0 0 chr2 69126495 69126801 -181561053 + AluSq SINE Alu 1 306 -7 472 81 14 0 chr2 69127297 69127371 -181560483 + L1PA4 LINE L1 6081 6155 0 26 0 0 0 chr2 69128135 69128161 -181559693 + AT_rich Low_complexity Low_complexity 1 26 0 2062 111 27 0 chr2 69128282 69128580 -181559274 - AluSx SINE Alu -5 307 2 696 256 111 10 chr2 69131005 69131212 -181556642 + MIR SINE MIR 14 241 -21 1930 130 7 13 chr2 69131296 69131597 -181556257 + AluJb SINE Alu 1 299 -13 306 0 0 0 chr2 69131688 69131722 -181556132 + (CA)n Simple_repeat Simple_repeat 2 35 0 303 210 16 0 chr2 69131741 69131803 -181556051 + MER81 DNA DNA 52 114 0 340 254 140 45 chr2 69131808 69132072 -181555782 - L1ME4a LINE L1 -54 6067 5779 319 259 65 50 chr2 69132136 69132351 -181555503 - L1ME4a LINE L1 -434 5687 5469 1824 137 17 3 chr2 69132664 69132957 -181554897 - AluJb SINE Alu -4 308 12 2252 82 0 10 chr2 69133819 69134122 -181553732 - AluSx SINE Alu -7 305 6 189 74 0 0 chr2 69134294 69134321 -181553533 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 406 243 54 9 chr2 69134371 69134482 -181553372 + MIR SINE MIR 34 149 -113 468 286 30 42 chr2 69136108 69136276 -181551578 + MIR SINE MIR 97 262 0 372 297 200 15 chr2 69136489 69136684 -181551170 + MIR SINE MIR 32 262 0 412 310 128 45 chr2 69136718 69137031 -181550823 + L2 LINE L2 2933 3271 -1 6098 136 30 19 chr2 69138263 69139489 -181548365 + L1PB1 LINE L1 4523 5734 -417 1977 98 35 0 chr2 69139489 69139776 -181548078 + AluSq SINE Alu 1 297 -16 6098 136 30 19 chr2 69139776 69139873 -181547981 + L1PB1 LINE L1 5734 5828 -323 2306 77 7 0 chr2 69139873 69140173 -181547681 - AluSg SINE Alu -8 302 1 6098 136 30 19 chr2 69140173 69140470 -181547384 + L1PB1 LINE L1 5828 6151 0 540 277 107 14 chr2 69140589 69140878 -181546976 - HAL1 LINE L1 -208 2299 1984 291 189 122 14 chr2 69141484 69141558 -181546296 + MIR SINE MIR 62 143 -65 2234 78 7 0 chr2 69142394 69142687 -181545167 - AluSg SINE Alu -15 295 1 2196 88 7 0 chr2 69142689 69142984 -181544870 + L1PB1 LINE L1 5855 6151 0 534 285 133 75 chr2 69143103 69143508 -181544346 - HAL1 LINE L1 -208 2299 1852 376 162 0 0 chr2 69143508 69143576 -181544278 - L1PB1 LINE L1 -1 6150 6083 534 285 133 75 chr2 69143576 69143728 -181544126 - HAL1 LINE L1 -655 1852 1710 1858 128 7 29 chr2 69143975 69144281 -181543573 - AluSx SINE Alu -13 299 1 2236 52 0 17 chr2 69144519 69144831 -181543023 + AluY SINE Alu 1 307 0 333 0 0 0 chr2 69144943 69144980 -181542874 + (CA)n Simple_repeat Simple_repeat 1 37 0 1659 107 0 4 chr2 69145067 69145311 -181542543 + AluSg/x SINE Alu 67 309 -3 753 267 109 32 chr2 69145336 69145647 -181542207 - L2 LINE L2 -870 2444 2110 1664 132 37 22 chr2 69146295 69146568 -181541286 - AluJo SINE Alu -31 281 5 296 309 0 0 chr2 69146641 69146735 -181541119 + MER5A DNA MER1_type 13 106 -83 2248 96 3 6 chr2 69146928 69147241 -181540613 + AluSx SINE Alu 1 312 0 377 214 180 0 chr2 69147557 69147646 -181540208 - L2 LINE L2 0 3313 3209 283 318 34 0 chr2 69148140 69148228 -181539626 - MIR SINE MIR -118 144 54 280 203 122 14 chr2 69149028 69149102 -181538752 + MIR SINE MIR 62 143 -65 1868 102 11 7 chr2 69149938 69150221 -181537633 - AluY SINE Alu -15 296 13 322 311 191 16 chr2 69151212 69151395 -181536459 - MIR SINE MIR 0 262 48 2026 115 31 0 chr2 69151598 69151886 -181535968 - AluSg SINE Alu -13 297 1 368 282 59 26 chr2 69152052 69152216 -181535638 - MIR SINE MIR -59 203 31 1062 198 106 10 chr2 69152222 69152515 -181535339 + MER33 DNA MER1_type 3 323 -1 287 203 136 0 chr2 69152641 69152700 -181535154 + LTR8 LTR ERV1 521 587 -104 195 42 0 0 chr2 69152700 69152724 -181535130 + (A)n Simple_repeat Simple_repeat 1 24 0 2202 98 14 0 chr2 69152761 69153057 -181534797 + AluSc SINE Alu 1 300 -9 889 153 11 28 chr2 69153098 69153274 -181534580 + FRAM SINE Alu 1 173 -3 186 71 0 0 chr2 69153324 69153352 -181534502 + (TC)n Simple_repeat Simple_repeat 1 28 0 2439 54 0 0 chr2 69153485 69153783 -181534071 + AluY SINE Alu 1 298 -13 325 265 24 0 chr2 69154147 69154230 -181533624 - MIR SINE MIR -24 238 154 2138 91 13 3 chr2 69154854 69155162 -181532692 + AluY SINE Alu 1 311 0 287 270 9 45 chr2 69155206 69155317 -181532537 - MER5A DNA MER1_type -2 187 81 2995 170 79 10 chr2 69155382 69155964 -181531890 + LTR26E LTR ERV1 1 622 0 624 187 89 16 chr2 69157971 69158094 -181529760 - FLAM_C SINE Alu -1 132 1 601 104 42 0 chr2 69158105 69158201 -181529653 - L1MB3 LINE L1 -3 6180 6081 31 0 0 0 chr2 69158724 69158755 -181529099 + AT_rich Low_complexity Low_complexity 1 31 0 374 295 100 27 chr2 69160648 69160831 -181527023 + MIR3 SINE MIR 4 198 -10 2007 142 6 3 chr2 69161552 69161863 -181525991 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 69161930 69161951 -181525903 + AT_rich Low_complexity Low_complexity 1 21 0 507 217 119 42 chr2 69161964 69162107 -181525747 - MIR3 SINE MIR -21 187 34 297 0 0 0 chr2 69162587 69162620 -181525234 + (TG)n Simple_repeat Simple_repeat 2 34 0 2245 106 0 0 chr2 69162929 69163241 -181524613 + AluSx SINE Alu 1 312 0 209 265 108 24 chr2 69164436 69164519 -181523335 + MER5A DNA MER1_type 98 187 -2 181 328 52 17 chr2 69164770 69164886 -181522968 - MIR SINE MIR -44 218 99 207 310 100 30 chr2 69164912 69165012 -181522842 + MIR SINE MIR 31 137 -71 288 0 0 0 chr2 69165080 69165112 -181522742 + (CA)n Simple_repeat Simple_repeat 2 33 0 249 146 0 0 chr2 69165112 69165160 -181522694 + (TC)n Simple_repeat Simple_repeat 1 48 0 205 226 9 139 chr2 69165419 69165534 -181522320 + L2 LINE L2 3191 3290 -23 238 276 0 53 chr2 69166512 69166588 -181521266 + MIR SINE MIR 47 118 -90 1887 124 3 51 chr2 69166773 69167088 -181520766 - AluSp SINE Alu -13 300 1 218 363 25 0 chr2 69167391 69167471 -181520383 - L2 LINE L2 -1 3271 3190 1028 172 0 0 chr2 69167483 69167646 -181520208 + FRAM SINE Alu 4 166 0 232 199 0 9 chr2 69167668 69167936 -181519918 + AluJo SINE Alu 2 308 0 321 305 32 0 chr2 69168037 69168132 -181519722 + L1M4 LINE L1 4120 4217 -1929 1425 126 17 70 chr2 69170049 69170351 -181517503 - AluJo SINE Alu 0 312 27 714 237 60 56 chr2 69170822 69171037 -181516817 + MIR SINE MIR 10 225 -37 270 210 210 0 chr2 69171041 69171122 -181516732 + MIR SINE MIR 90 187 -75 451 290 60 60 chr2 69171167 69171350 -181516504 - MIR SINE MIR -17 245 63 242 308 48 20 chr2 69171459 69171605 -181516249 + L1MC5 LINE L1 7634 7783 -178 23 0 0 0 chr2 69173964 69173987 -181513867 + GC_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr2 69174344 69174393 -181513461 + GC_rich Low_complexity Low_complexity 1 49 0 2154 81 13 3 chr2 69175986 69176295 -181511559 + AluSp SINE Alu 1 312 -1 2088 127 0 0 chr2 69176451 69176750 -181511104 + AluSq SINE Alu 1 299 -14 289 281 115 14 chr2 69177489 69177628 -181510226 + MIR SINE MIR 48 200 -62 29 78 0 0 chr2 69178589 69178653 -181509201 + GC_rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr2 69178982 69179012 -181508842 + GC_rich Low_complexity Low_complexity 1 30 0 182 317 89 24 chr2 69179965 69180088 -181507766 - L2 LINE L2 -39 3233 3103 520 293 26 44 chr2 69180474 69180703 -181507151 + Charlie8 DNA MER1_type 7 231 -2186 286 98 24 0 chr2 69180964 69181005 -181506849 + LTR16A1 LTR ERVL 414 455 -2 185 359 109 25 chr2 69181109 69181385 -181506469 - L2 LINE L2 -576 2738 2440 694 228 20 40 chr2 69181554 69181756 -181506098 + MLT1K LTR MaLR 389 586 -2 1215 200 139 76 chr2 69182246 69182620 -181505234 - MLT1H LTR MaLR 0 549 132 2197 105 0 3 chr2 69182620 69182933 -181504921 + AluSq SINE Alu 1 312 -1 1215 200 139 76 chr2 69182933 69183074 -181504780 - MLT1H LTR MaLR -417 132 1 2202 118 0 10 chr2 69183110 69183474 -181504380 - AluSx SINE Alu 0 361 1 1647 171 13 3 chr2 69183476 69183774 -181504080 - AluJo SINE Alu -11 301 1 376 199 15 37 chr2 69183792 69183928 -181503926 + (TA)n Simple_repeat Simple_repeat 2 134 0 452 216 0 7 chr2 69184356 69184495 -181503359 + (ATGGTG)n Simple_repeat Simple_repeat 5 142 0 1951 126 10 13 chr2 69184628 69184937 -181502917 + AluSc SINE Alu 1 308 -1 474 268 109 75 chr2 69185033 69185298 -181502556 + L2 LINE L2 2998 3271 -1 353 257 63 46 chr2 69185459 69185611 -181502243 - MIR3 SINE MIR -4 204 42 239 231 0 0 chr2 69185849 69185901 -181501953 + MLT1L LTR MaLR 158 209 -406 419 257 36 65 chr2 69185965 69186297 -181501557 + MLT1L LTR MaLR 220 597 -18 21 0 0 0 chr2 69186654 69186675 -181501179 + AT_rich Low_complexity Low_complexity 1 21 0 2514 50 0 0 chr2 69186678 69186980 -181500874 + AluY SINE Alu 1 302 -9 674 201 7 50 chr2 69186982 69187121 -181500733 + FLAM_A SINE Alu 1 133 0 809 20 0 10 chr2 69187244 69187344 -181500510 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 1887 96 39 0 chr2 69187347 69187607 -181500247 - AluSc SINE Alu -35 274 5 1758 167 0 0 chr2 69187614 69187908 -181499946 - AluJb SINE Alu -18 294 1 21 0 0 0 chr2 69187918 69187939 -181499915 + AT_rich Low_complexity Low_complexity 1 21 0 1921 118 7 0 chr2 69187948 69188235 -181499619 + AluSq SINE Alu 14 302 -11 1150 93 17 12 chr2 69188242 69188414 -181499440 - L1MA2 LINE L1 0 6304 6132 1367 24 18 0 chr2 69188414 69188580 -181499274 - AluY SINE Alu -16 295 127 6105 126 8 24 chr2 69188583 69188953 -181498901 - L1MA2 LINE L1 -172 6132 5758 2288 97 3 0 chr2 69188953 69189261 -181498593 - AluSg SINE Alu -1 309 1 6105 126 8 24 chr2 69189261 69189658 -181498196 - L1MA2 LINE L1 -546 5758 5356 2353 97 0 0 chr2 69189658 69189969 -181497885 - AluSq SINE Alu -2 311 1 6105 126 8 24 chr2 69189969 69191059 -181496795 - L1MA2 LINE L1 -948 5356 4303 746 253 57 25 chr2 69191061 69191342 -181496512 - AluJb SINE Alu 0 312 23 1457 167 44 10 chr2 69191551 69191845 -181496009 - AluJb SINE Alu 0 312 9 1589 155 0 65 chr2 69191851 69191905 -181495949 - L1MA2 LINE L1 -1829 4317 4261 2380 75 0 0 chr2 69191905 69192210 -181495644 - AluSc SINE Alu -2 307 3 1589 155 0 65 chr2 69192210 69192477 -181495377 - L1MA2 LINE L1 -1885 4261 4017 309 248 178 10 chr2 69192477 69192578 -181495276 - L1ME4a LINE L1 -116 6005 5888 375 273 134 26 chr2 69193368 69193599 -181494255 + L2 LINE L2 1802 2057 -1257 199 178 20 168 chr2 69193678 69193779 -181494075 - MIR SINE MIR 0 262 177 957 225 52 0 chr2 69193784 69193997 -181493857 - MER58A DNA MER1_type 0 224 1 203 188 0 83 chr2 69193997 69194045 -181493809 + L2 LINE L2 3189 3232 -81 606 301 30 0 chr2 69194094 69194260 -181493594 - MIR SINE MIR -91 171 1 266 238 154 21 chr2 69194533 69194676 -181493178 - L2 LINE L2 -452 2862 2701 25 31 0 0 chr2 69194680 69194712 -181493142 + AT_rich Low_complexity Low_complexity 1 32 0 2216 103 3 3 chr2 69194832 69195144 -181492710 + AluSx SINE Alu 1 312 0 267 270 104 9 chr2 69195217 69195332 -181492522 + LTR33 LTR ERVL 294 419 -102 712 184 16 0 chr2 69195345 69195470 -181492384 + MER106B DNA MER1_type 3 129 -930 333 255 10 20 chr2 69195531 69195633 -181492221 + LTR33 LTR ERVL 421 521 0 366 156 218 49 chr2 69195709 69195842 -181492012 + MIR SINE MIR 34 184 -78 258 358 98 25 chr2 69195876 69196234 -181491620 - L2 LINE L2 -2763 551 168 1435 209 55 16 chr2 69196288 69196599 -181491255 + MER58B DNA MER1_type 1 323 -18 1432 171 66 46 chr2 69196608 69196912 -181490942 + AluJb SINE Alu 3 312 0 243 218 18 36 chr2 69196940 69196995 -181490859 - MER91C DNA MER1_type -63 77 24 324 244 0 23 chr2 69197173 69197259 -181490595 + MLT1L LTR MaLR 1 84 -531 4675 192 91 15 chr2 69197286 69198349 -181489505 + L1MC4 LINE L1 6899 8042 0 369 260 132 86 chr2 69198354 69198658 -181489196 + MLT1J LTR MaLR 97 414 -97 612 322 136 29 chr2 69198780 69199392 -181488462 + L2 LINE L2 2069 2745 -569 312 77 0 0 chr2 69199790 69199829 -181488025 - U2 snRNA snRNA -149 39 1 2294 85 0 0 chr2 69200151 69200445 -181487409 - AluY SINE Alu -17 294 1 305 284 204 6 chr2 69200744 69200906 -181486948 + MIR SINE MIR 4 197 -65 387 280 148 39 chr2 69200910 69201092 -181486762 - L2 LINE L2 0 3313 3112 512 261 46 7 chr2 69201524 69201677 -181486177 + L2 LINE L2 2515 2673 -641 2285 87 0 3 chr2 69202307 69202618 -181485236 - AluY SINE Alu -1 310 1 284 210 218 8 chr2 69202702 69202826 -181485028 - L1MC4 LINE L1 0 8042 7893 418 270 56 56 chr2 69202911 69203107 -181484747 - L1MC4 LINE L1 -152 7890 7695 404 269 164 25 chr2 69203207 69203408 -181484446 + MIR SINE MIR 15 243 -19 325 274 162 26 chr2 69203570 69203687 -181484167 + L2 LINE L2 3180 3312 -1 2195 86 0 48 chr2 69203766 69204081 -181483773 - AluSc SINE Alu -9 300 1 356 244 50 84 chr2 69204156 69204275 -181483579 - MLT1H LTR MaLR -23 526 405 902 150 66 6 chr2 69205138 69205305 -181482549 + FRAM SINE Alu 1 169 -7 240 263 110 0 chr2 69205481 69205599 -181482255 + L1M4 LINE L1 4243 4373 -1773 761 222 0 14 chr2 69205607 69205862 -181481992 + FLAM_C SINE Alu 2 254 0 2652 109 10 18 chr2 69205936 69206329 -181481525 + MLT1B LTR MaLR 1 390 0 841 248 23 41 chr2 69207404 69207670 -181480184 - MIR SINE MIR -1 261 1 295 282 89 75 chr2 69209150 69209527 -181478327 - L2 LINE L2 -22 3250 2796 286 235 67 101 chr2 69209537 69209598 -181478256 - MER5B DNA MER1_type -62 116 59 2118 99 3 35 chr2 69209598 69209912 -181477942 - AluSx SINE Alu -8 304 1 286 235 67 101 chr2 69209912 69209969 -181477885 - MER5B DNA MER1_type -119 59 2 624 27 0 0 chr2 69210235 69210309 -181477545 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 2133 68 14 0 chr2 69210309 69210587 -181477267 - AluY SINE Alu -29 282 1 1351 174 9 93 chr2 69210591 69210912 -181476942 - AluJo SINE Alu -18 294 1 1051 249 36 18 chr2 69212156 69212381 -181475473 - MIR SINE MIR -21 241 13 230 313 168 22 chr2 69212486 69212665 -181475189 + L2 LINE L2 3102 3306 -7 2065 113 0 3 chr2 69212856 69213147 -181474707 - AluSx SINE Alu -22 290 1 24 32 0 0 chr2 69213341 69213372 -181474482 + AT_rich Low_complexity Low_complexity 1 31 0 1817 165 3 0 chr2 69213542 69213845 -181474009 - AluSx SINE Alu -8 304 1 23 0 0 0 chr2 69213855 69213878 -181473976 + AT_rich Low_complexity Low_complexity 1 23 0 851 161 0 0 chr2 69213888 69214018 -181473836 + FLAM_C SINE Alu 1 130 -3 1924 139 75 23 chr2 69214329 69214674 -181473180 + MLT1A1 LTR MaLR 3 365 0 184 184 41 41 chr2 69214870 69214919 -181472935 + L2 LINE L2 3014 3062 -210 1683 161 25 0 chr2 69214940 69215225 -181472629 + AluJo SINE Alu 1 292 -20 249 273 0 0 chr2 69215453 69215508 -181472346 - MIR SINE MIR -1 261 207 280 267 158 27 chr2 69215545 69215691 -181472163 + MER5A DNA MER1_type 21 185 -4 472 234 28 0 chr2 69215705 69215812 -181472042 - LTR37B LTR ERV1 -358 110 1 365 216 62 62 chr2 69215972 69216107 -181471747 - MIR SINE MIR -19 243 110 257 343 64 14 chr2 69217306 69217446 -181470408 - MIR3 SINE MIR -21 187 41 1877 143 124 12 chr2 69217907 69218329 -181469525 - MER31A LTR ERV1 -5 656 1 744 279 78 8 chr2 69219041 69219285 -181468569 - MIR SINE MIR 0 262 2 283 146 0 0 chr2 69219612 69219653 -181468201 - AluSc SINE Alu -23 276 236 606 114 0 114 chr2 69219653 69219743 -181468111 - LTR12 LTR ERV1 -133 581 505 2513 42 0 10 chr2 69219743 69220054 -181467800 - AluY SINE Alu -3 308 1 606 114 0 114 chr2 69220054 69220077 -181467777 - LTR12 LTR ERV1 -209 505 481 307 273 10 0 chr2 69220078 69220177 -181467677 - LTR30 LTR ERV1 -79 643 544 1268 143 5 14 chr2 69220287 69220496 -181467358 - LTR12 LTR ERV1 -507 207 1 1856 77 0 0 chr2 69220500 69220735 -181467119 - AluSc SINE Alu -74 235 1 839 184 6 0 chr2 69221299 69221462 -181466392 + FRAM SINE Alu 1 40 0 190 278 0 19 chr2 69221566 69221620 -181466234 + MIR SINE MIR 10 62 -200 181 310 11 46 chr2 69221703 69221790 -181466064 + MIR SINE MIR 176 259 -3 2134 116 0 0 chr2 69223273 69223576 -181464278 + AluSx SINE Alu 1 303 -9 717 155 17 0 chr2 69224128 69224244 -181463610 - FLAM_C SINE Alu -15 118 1 1008 111 0 0 chr2 69224420 69224555 -181463299 + AluSq/x SINE Alu 1 135 -178 1646 119 100 0 chr2 69224572 69224833 -181463021 + AluSc SINE Alu 1 287 -22 606 231 60 22 chr2 69225480 69225662 -181462192 - MIR SINE MIR -54 208 20 378 158 317 10 chr2 69225693 69225794 -181462060 + FLAM_A SINE Alu 2 133 0 1728 202 124 54 chr2 69225802 69225963 -181461891 - L1ME1 LINE L1 -8 6158 6010 2101 111 0 16 chr2 69225963 69226270 -181461584 - AluSx SINE Alu -10 302 1 1728 202 124 54 chr2 69226270 69226639 -181461215 - L1ME1 LINE L1 -156 6010 5588 1080 180 22 138 chr2 69227651 69227701 -181460153 - MER39 LTR ERV1 -50 657 603 2092 119 0 10 chr2 69227701 69228011 -181459843 + AluSx SINE Alu 1 307 -5 1080 180 22 138 chr2 69228011 69228072 -181459782 - MER39 LTR ERV1 -104 603 537 2127 118 3 0 chr2 69228072 69228377 -181459477 + AluSx SINE Alu 1 306 -6 1080 180 22 138 chr2 69228377 69228409 -181459445 - MER39 LTR ERV1 -170 537 503 2256 94 7 0 chr2 69228409 69228716 -181459138 - AluSx SINE Alu -3 309 1 1080 180 22 138 chr2 69228716 69228926 -181458928 - MER39 LTR ERV1 -204 503 343 876 167 204 18 chr2 69228927 69229148 -181458706 - AluSg1 SINE Alu -14 295 34 1535 190 0 14 chr2 69229196 69229491 -181458363 - AluJo SINE Alu -21 291 1 385 233 75 50 chr2 69229525 69229645 -181458209 - LTR48B LTR ERV1 -499 123 1 704 154 36 0 chr2 69230209 69230319 -181457535 + AluJo/FLAM SINE Alu 5 118 -194 1690 184 0 19 chr2 69230319 69230628 -181457226 - AluJo SINE Alu -9 303 1 187 266 181 11 chr2 69231570 69231664 -181456190 + L2 LINE L2 3185 3294 -19 896 221 65 15 chr2 69231858 69232057 -181455797 + MIR SINE MIR 13 221 -41 1126 250 82 19 chr2 69232139 69232455 -181455399 - LTR16C LTR ERVL 0 491 156 21 0 0 0 chr2 69233448 69233469 -181454385 + AT_rich Low_complexity Low_complexity 1 21 0 747 188 0 0 chr2 69233471 69233599 -181454255 - FLAM_C SINE Alu -5 128 1 1854 189 43 26 chr2 69233640 69233726 -181454128 + MLT1C LTR MaLR 6 89 -378 665 50 0 0 chr2 69233726 69233806 -181454048 - MADE1 DNA Mariner 0 80 1 1854 189 43 26 chr2 69233806 69234137 -181453717 + MLT1C LTR MaLR 89 430 -37 1847 132 0 4 chr2 69234515 69234795 -181453059 + AluJb SINE Alu 11 289 -23 534 283 0 0 chr2 69235039 69235198 -181452656 + L1ME4a LINE L1 5691 5849 -272 2094 120 3 0 chr2 69235422 69235723 -181452131 + AluSp SINE Alu 1 302 -11 2244 98 0 9 chr2 69235733 69236048 -181451806 + AluSx SINE Alu 1 312 0 254 313 0 12 chr2 69236485 69236565 -181451289 - L2 LINE L2 -8 3264 3186 388 296 109 48 chr2 69236596 69236826 -181451028 - MIR SINE MIR -17 245 2 1924 113 30 10 chr2 69237014 69237314 -181450540 + AluSq SINE Alu 5 310 -3 6755 127 25 8 chr2 69237451 69238576 -181449278 - L1MC1 LINE L1 -5 6328 5186 490 266 35 69 chr2 69239152 69239355 -181448499 + MIR SINE MIR 30 225 -37 2172 82 7 0 chr2 69239538 69239841 -181448013 + AluY SINE Alu 1 305 0 1918 143 0 3 chr2 69239869 69240163 -181447691 + AluJb SINE Alu 2 294 -18 479 257 19 130 chr2 69240388 69240432 -181447422 - MIR SINE MIR -12 250 203 2236 89 0 7 chr2 69240432 69240734 -181447120 - AluSc SINE Alu -9 300 1 479 257 19 130 chr2 69240734 69240803 -181447051 - MIR SINE MIR -59 203 128 2040 115 3 23 chr2 69240803 69241107 -181446747 - AluSq SINE Alu -13 300 3 479 257 19 130 chr2 69241107 69241245 -181446609 - MIR SINE MIR -134 128 23 2754 188 43 35 chr2 69241263 69241749 -181446105 - L1MA9 LINE L1 -38 6274 5780 378 57 0 0 chr2 69241749 69241802 -181446052 + (TG)n Simple_repeat Simple_repeat 2 54 0 2754 188 43 35 chr2 69241802 69241963 -181445891 - L1MA9 LINE L1 -532 5780 5622 1411 239 124 7 chr2 69242521 69242972 -181444882 - LTR33 LTR ERVL -3 518 15 401 279 12 48 chr2 69242983 69243193 -181444661 + L1MC4a LINE L1 5708 5821 -343 2143 99 0 3 chr2 69243265 69243557 -181444297 + AluSq SINE Alu 7 297 -16 608 231 82 62 chr2 69243714 69243922 -181443932 + MLT1L LTR MaLR 1 212 -403 1897 138 0 46 chr2 69244728 69245053 -181442801 - AluSg SINE Alu 0 310 1 322 238 60 0 chr2 69245683 69245767 -181442087 + MLT1L LTR MaLR 310 398 -217 2050 105 0 20 chr2 69245776 69246071 -181441783 + AluSg SINE Alu 1 289 -21 4829 69 41 57 chr2 69246180 69246964 -181440890 + SVA Other Other 96 866 -520 591 104 8 37 chr2 69246984 69247118 -181440736 + SVA Other Other 665 794 -592 6162 73 7 35 chr2 69247132 69248139 -181439715 + SVA Other Other 433 1413 0 1932 176 40 24 chr2 69248548 69248949 -181438905 - THE1C LTR MaLR -2 426 1 2021 199 7 7 chr2 69249082 69249488 -181438366 - L1ME1 LINE L1 -5 6161 5756 1851 83 0 4 chr2 69249488 69249728 -181438126 + AluSq SINE Alu 62 300 -13 1561 183 0 11 chr2 69249736 69250074 -181437780 - AluJo SINE Alu 0 335 1 1707 200 91 43 chr2 69250076 69250350 -181437504 - L1ME1 LINE L1 -583 5579 5320 2137 92 3 0 chr2 69250350 69250663 -181437191 - AluSp SINE Alu 0 315 2 1707 200 91 43 chr2 69250663 69251234 -181436620 - L1ME1 LINE L1 -842 5320 4692 204 321 0 0 chr2 69251298 69251351 -181436503 + MIR SINE MIR 51 103 -159 2048 135 0 13 chr2 69251424 69251735 -181436119 + AluSx SINE Alu 1 307 -5 568 217 21 3 chr2 69251918 69252046 -181435808 + MLT1I LTR MaLR 98 207 -202 265 363 49 0 chr2 69252448 69252550 -181435304 + LTR67 LTR ERVL 115 221 -336 290 242 55 47 chr2 69252559 69252687 -181435167 + LTR67 LTR ERVL 347 475 -82 1581 168 21 10 chr2 69253041 69253332 -181434522 - AluJb SINE Alu -14 298 5 1419 266 79 2 chr2 69253464 69253908 -181433946 - LTR16C LTR ERVL -9 482 5 557 314 7 13 chr2 69254064 69254217 -181433637 + L2 LINE L2 3117 3268 -4 1041 253 138 40 chr2 69256158 69256585 -181431269 + MLT1J LTR MaLR 27 495 -16 21 57 0 0 chr2 69258084 69258119 -181429735 + AT_rich Low_complexity Low_complexity 1 35 0 196 278 194 37 chr2 69258287 69258395 -181429459 + MIR SINE MIR 102 226 -36 222 62 0 0 chr2 69258596 69258628 -181429226 + (TG)n Simple_repeat Simple_repeat 1 32 0 2074 96 4 0 chr2 69258724 69259004 -181428850 + AluSp SINE Alu 1 281 -32 315 0 0 0 chr2 69259007 69259042 -181428812 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 189 261 22 0 chr2 69259436 69259482 -181428372 + MIR SINE MIR 76 122 -86 2116 147 37 3 chr2 69259693 69260019 -181427835 - MER1B DNA MER1_type 0 337 1 262 317 133 0 chr2 69260216 69260336 -181427518 + MIR SINE MIR 34 169 -93 1596 171 10 106 chr2 69260352 69260576 -181427278 + MLT1A2 LTR MaLR 1 168 -206 438 79 0 0 chr2 69260576 69260639 -181427215 + (TG)n Simple_repeat Simple_repeat 2 64 0 1596 171 10 106 chr2 69260639 69260828 -181427026 + MLT1A2 LTR MaLR 168 374 0 389 291 82 22 chr2 69260848 69261030 -181426824 - L2 LINE L2 0 3313 3121 574 279 39 39 chr2 69262397 69262547 -181425307 + L1MC4 LINE L1 7758 7907 -135 228 67 0 0 chr2 69262547 69262577 -181425277 + (TG)n Simple_repeat Simple_repeat 1 30 0 574 279 39 39 chr2 69262577 69262637 -181425217 + L1MC4 LINE L1 7907 7966 -76 923 171 81 43 chr2 69262637 69262848 -181425006 + MER20 DNA MER1_type 1 219 0 574 279 39 39 chr2 69262848 69262919 -181424935 + L1MC4 LINE L1 7965 8040 -2 2279 81 0 0 chr2 69262957 69263252 -181424602 + AluSx SINE Alu 1 295 -17 346 218 48 40 chr2 69263279 69263403 -181424451 - MER112 DNA MER1_type -135 125 1 767 241 70 53 chr2 69263503 69263731 -181424123 - MIR SINE MIR -22 240 9 634 116 0 151 chr2 69265692 69265741 -181422113 - L1MB3 LINE L1 -1 6182 6127 2543 73 0 0 chr2 69265741 69266041 -181421813 - AluY SINE Alu -11 300 1 634 116 0 151 chr2 69266041 69266072 -181421782 - L1MB3 LINE L1 -56 6127 6093 1598 156 48 0 chr2 69266072 69266192 -181421662 + AluJb SINE Alu 1 114 -210 257 0 30 0 chr2 69266192 69266225 -181421629 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1598 156 48 0 chr2 69266225 69266415 -181421439 + AluJb SINE Alu 114 324 0 634 116 0 151 chr2 69266415 69266504 -181421350 - L1MB3 LINE L1 -90 6093 6037 666 129 0 24 chr2 69266525 69266649 -181421205 - L1MB7 LINE L1 -19 6165 6045 810 151 7 27 chr2 69266668 69266814 -181421040 - HsTC2 DNA Tc2 -312 1586 1268 282 183 207 0 chr2 69266866 69266948 -181420906 - HsTC2 DNA Tc2 -1793 105 7 189 308 56 84 chr2 69267114 69267238 -181420616 + L2 LINE L2 3168 3289 -24 2486 70 0 0 chr2 69267238 69267537 -181420317 + AluY SINE Alu 1 299 -12 189 308 56 84 chr2 69267537 69267555 -181420299 + L2 LINE L2 3289 3306 -7 2303 120 0 0 chr2 69267789 69268090 -181419764 - AluSx SINE Alu -11 301 1 382 274 21 0 chr2 69269290 69269385 -181418469 + MER5A DNA MER1_type 13 109 -80 200 154 51 0 chr2 69269729 69269768 -181418086 + L2 LINE L2 3217 3257 -15 2057 119 0 29 chr2 69269962 69270273 -181417581 - AluSx SINE Alu -10 302 1 31 0 0 0 chr2 69270461 69270492 -181417362 + AT_rich Low_complexity Low_complexity 1 31 0 1626 169 52 0 chr2 69270492 69270764 -181417090 - AluJo SINE Alu -26 286 1 815 146 126 0 chr2 69270769 69270920 -181416934 + MER58A DNA MER1_type 45 214 -10 2357 112 0 3 chr2 69270921 69271234 -181416620 + AluSx SINE Alu 1 312 0 22 80 0 0 chr2 69271284 69271334 -181416520 + AT_rich Low_complexity Low_complexity 1 50 0 28 91 0 0 chr2 69271486 69271563 -181416291 + AT_rich Low_complexity Low_complexity 1 77 0 436 238 56 21 chr2 69271570 69271713 -181416141 - L1ME4a LINE L1 -5 6116 5969 26 0 0 0 chr2 69271829 69271855 -181415999 + AT_rich Low_complexity Low_complexity 1 26 0 890 170 57 0 chr2 69271897 69272058 -181415796 - AluJb SINE Alu 0 302 134 1838 144 46 11 chr2 69272058 69272342 -181415512 - AluSx SINE Alu -18 294 1 597 342 10 13 chr2 69272350 69272660 -181415194 - L1ME4a LINE L1 -301 5820 5512 1936 139 6 40 chr2 69272734 69273057 -181414797 - AluJo SINE Alu 0 312 1 1862 184 10 0 chr2 69274190 69274500 -181413354 - 7SLRNA srpRNA srpRNA 0 320 8 249 308 58 17 chr2 69274850 69274970 -181412884 + L2 LINE L2 3142 3266 -6 448 239 65 32 chr2 69275445 69275600 -181412254 + MIR SINE MIR 90 249 -13 2511 47 10 0 chr2 69275610 69275908 -181411946 + AluY SINE Alu 1 301 -10 315 71 0 0 chr2 69276602 69276644 -181411210 + (TG)n Simple_repeat Simple_repeat 1 42 0 835 244 63 0 chr2 69278578 69278783 -181409071 + MER20 DNA MER1_type 2 219 0 2188 60 50 33 chr2 69279552 69279854 -181408000 + AluY SINE Alu 1 307 -4 2072 124 14 0 chr2 69280760 69281050 -181406804 + AluSg SINE Alu 1 294 -16 889 137 0 0 chr2 69281080 69281211 -181406643 + FLAM_C SINE Alu 2 132 -1 1908 58 4 8 chr2 69281374 69281615 -181406239 - AluY SINE Alu 0 311 72 1483 110 5 18 chr2 69283268 69283487 -181404367 - AluSp SINE Alu -4 309 94 1343 228 112 55 chr2 69285320 69285884 -181401970 - L1MC5 LINE L1 -36 7925 7392 1208 138 13 40 chr2 69285884 69286109 -181401745 + MER20 DNA MER1_type 1 219 0 1343 228 112 55 chr2 69286109 69286251 -181401603 - L1MC5 LINE L1 -569 7392 7260 227 139 47 23 chr2 69286274 69286317 -181401537 + MER94 DNA DNA 25 68 -66 1703 183 6 16 chr2 69286450 69286761 -181401093 - AluJo SINE Alu -4 308 1 582 282 85 43 chr2 69286766 69287071 -181400783 - HAL1 LINE L1 -25 2482 2165 * 1308 254 113 26 chr2 69287065 69287518 -181400336 - HAL1 LINE L1 -1662 845 354 2891 181 23 97 chr2 69287521 69287636 -181400218 - L1MD2 LINE L1 -10 6229 6107 1897 134 3 18 chr2 69287636 69287920 -181399934 + AluJb SINE Alu 3 282 -30 2891 181 23 97 chr2 69287920 69289095 -181398759 - L1MD2 LINE L1 -132 6107 5049 1976 123 0 4 chr2 69289128 69289405 -181398449 + AluSx SINE Alu 1 276 -36 261 0 0 0 chr2 69289417 69289446 -181398408 + (CAA)n Simple_repeat Simple_repeat 2 30 0 748 201 8 0 chr2 69289454 69289588 -181398266 - FRAM SINE Alu -30 146 12 990 194 118 89 chr2 69289594 69289929 -181397925 - L1MD2 LINE L1 -1144 5071 4722 2214 115 0 0 chr2 69289929 69290224 -181397630 - AluSx SINE Alu -12 300 6 990 194 118 89 chr2 69290224 69290270 -181397584 - L1MD2 LINE L1 -1493 4722 4679 328 213 13 0 chr2 69290352 69290427 -181397427 - L1MD2 LINE L1 -1527 4688 4613 * 1407 205 67 115 chr2 69290426 69290673 -181397181 - L1MD2 LINE L1 -2022 4193 3936 1939 133 43 7 chr2 69290673 69290973 -181396881 - AluSx SINE Alu -1 311 1 1407 205 67 115 chr2 69290973 69291019 -181396835 - L1MD2 LINE L1 -2279 3936 3889 1555 130 6 136 chr2 69291019 69291358 -181396496 - AluJb SINE Alu -17 295 1 1407 205 67 115 chr2 69291358 69291396 -181396458 - L1MD2 LINE L1 -2326 3889 3851 1896 108 73 7 chr2 69291396 69291683 -181396171 - AluSx SINE Alu -2 310 5 1407 205 67 115 chr2 69291683 69291958 -181395896 - L1MD2 LINE L1 -2364 3851 3614 755 238 56 20 chr2 69291953 69292255 -181395599 - L1MD2 LINE L1 -3013 3202 2890 * 580 228 31 12 chr2 69292739 69292901 -181394953 - L1MD2 LINE L1 -3322 2893 2729 * 853 252 8 33 chr2 69292896 69293138 -181394716 - L1MD2 LINE L1 -6150 246 11 535 279 13 7 chr2 69293116 69293270 -181394584 - HAL1 LINE L1 -2135 441 287 * 342 255 91 82 chr2 69293394 69293625 -181394229 - MER102b DNA MER1_type -3 338 106 2253 111 3 0 chr2 69293631 69293937 -181393917 - AluSc SINE Alu -2 307 1 396 267 20 41 chr2 69294174 69294320 -181393534 - MIR3 SINE MIR -8 200 58 234 259 0 0 chr2 69294387 69294441 -181393413 + L2 LINE L2 3255 3308 -5 281 232 37 24 chr2 69294487 69294569 -181393285 - MLT1J LTR MaLR -2 509 427 460 253 104 22 chr2 69294749 69294931 -181392923 - MLT1J LTR MaLR -310 201 5 261 0 0 0 chr2 69295685 69295714 -181392140 + (T)n Simple_repeat Simple_repeat 1 29 0 233 310 0 35 chr2 69296459 69296546 -181391308 + MLT1K LTR MaLR 310 393 -195 613 218 56 0 chr2 69296558 69296700 -181391154 + L2 LINE L2 2594 2743 -571 2161 98 7 14 chr2 69296706 69297002 -181390852 + AluSx SINE Alu 1 294 -18 878 251 27 5 chr2 69297030 69297249 -181390605 - MIR SINE MIR -11 251 28 502 309 80 55 chr2 69297377 69297739 -181390115 - MLT1K LTR MaLR -176 412 42 2268 98 0 43 chr2 69297741 69298096 -181389758 + AluSx SINE Alu 1 341 0 281 342 0 1 chr2 69298190 69298295 -181389559 - MIR SINE MIR -67 141 38 2402 97 0 0 chr2 69298315 69298625 -181389229 + AluSx SINE Alu 1 310 -2 202 172 0 35 chr2 69299163 69299221 -181388633 + CT-rich Low_complexity Low_complexity 4 59 0 1933 177 39 23 chr2 69300261 69300662 -181387192 - THE1C LTR MaLR -2 426 1 2022 199 7 7 chr2 69300795 69301201 -181386653 - L1ME1 LINE L1 -5 6161 5756 1963 83 0 4 chr2 69301201 69301442 -181386412 + AluSq SINE Alu 62 301 -12 1648 186 0 11 chr2 69301450 69301780 -181386074 - AluJo SINE Alu 0 327 1 1777 199 91 43 chr2 69301782 69302056 -181385798 - L1ME1 LINE L1 -583 5579 5320 2265 92 3 0 chr2 69302056 69302369 -181385485 - AluSp SINE Alu 0 315 2 1777 199 91 43 chr2 69302369 69302940 -181384914 - L1ME1 LINE L1 -842 5320 4692 183 321 0 0 chr2 69303004 69303057 -181384797 + MIR SINE MIR 51 103 -159 2170 129 0 19 chr2 69303130 69303441 -181384413 + AluSx SINE Alu 1 305 -7 565 217 21 3 chr2 69303624 69303752 -181384102 + MLT1I LTR MaLR 98 207 -202 267 363 49 0 chr2 69304154 69304256 -181383598 + LTR67 LTR ERVL 115 221 -336 286 242 55 47 chr2 69304265 69304393 -181383461 + LTR67 LTR ERVL 347 475 -82 1679 172 21 10 chr2 69304747 69305038 -181382816 - AluJb SINE Alu -14 298 5 1430 253 92 16 chr2 69305170 69305616 -181382238 - LTR16C LTR ERVL -9 482 3 508 314 7 13 chr2 69305770 69305923 -181381931 + L2 LINE L2 3117 3268 -4 1029 253 138 40 chr2 69307865 69308292 -181379562 + MLT1J LTR MaLR 27 495 -16 21 57 0 0 chr2 69309792 69309827 -181378027 + AT_rich Low_complexity Low_complexity 1 35 0 222 62 0 0 chr2 69310304 69310336 -181377518 + (TG)n Simple_repeat Simple_repeat 1 32 0 2176 100 4 0 chr2 69310432 69310712 -181377142 + AluSp SINE Alu 1 281 -32 285 51 0 0 chr2 69310715 69310754 -181377100 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2104 147 37 3 chr2 69311405 69311731 -181376123 - MER1B DNA MER1_type 0 337 1 220 269 142 16 chr2 69311923 69312048 -181375806 + MIR SINE MIR 30 169 -62 1575 174 10 106 chr2 69312064 69312288 -181375566 + MLT1A2 LTR MaLR 1 168 -206 417 95 0 0 chr2 69312288 69312351 -181375503 + (TG)n Simple_repeat Simple_repeat 2 64 0 1575 174 10 106 chr2 69312351 69312540 -181375314 + MLT1A2 LTR MaLR 168 374 0 303 274 92 24 chr2 69312578 69312742 -181375112 - L2 LINE L2 -18 3295 3121 568 284 32 39 chr2 69314109 69314261 -181373593 + L1MC4 LINE L1 7758 7910 -132 312 91 0 0 chr2 69314261 69314305 -181373549 + (TG)n Simple_repeat Simple_repeat 1 44 0 568 284 32 39 chr2 69314305 69314365 -181373489 + L1MC4 LINE L1 7910 7969 -73 920 171 81 43 chr2 69314365 69314576 -181373278 + MER20 DNA MER1_type 1 219 0 568 284 32 39 chr2 69314576 69314647 -181373207 + L1MC4 LINE L1 7969 8040 -2 2408 81 0 0 chr2 69314685 69314980 -181372874 + AluSx SINE Alu 1 295 -17 350 218 48 40 chr2 69315007 69315131 -181372723 - MER112 DNA MER1_type -135 125 1 681 242 69 52 chr2 69315231 69315462 -181372392 - MIR SINE MIR -22 240 6 578 116 0 151 chr2 69317420 69317469 -181370385 - L1MB3 LINE L1 -1 6182 6127 2574 70 0 0 chr2 69317469 69317771 -181370083 - AluY SINE Alu -9 302 1 578 116 0 151 chr2 69317771 69317802 -181370052 - L1MB3 LINE L1 -56 6127 6093 1673 156 44 0 chr2 69317802 69317923 -181369931 + AluJb SINE Alu 1 115 -201 257 0 30 0 chr2 69317923 69317956 -181369898 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1673 156 44 0 chr2 69317956 69318138 -181369716 + AluJb SINE Alu 115 316 0 578 116 0 151 chr2 69318138 69318227 -181369627 - L1MB3 LINE L1 -90 6093 6037 623 145 0 24 chr2 69318247 69318371 -181369483 - L1MB7 LINE L1 -19 6165 6045 756 158 7 27 chr2 69318390 69318536 -181369318 - HsTC2 DNA Tc2 -312 1586 1268 263 183 207 0 chr2 69318588 69318670 -181369184 - HsTC2 DNA Tc2 -1793 105 7 235 332 42 84 chr2 69318789 69318960 -181368894 + L2 LINE L2 3125 3289 -24 2525 67 0 0 chr2 69318960 69319259 -181368595 + AluY SINE Alu 1 299 -12 235 332 42 84 chr2 69319259 69319277 -181368577 + L2 LINE L2 3289 3306 -7 2317 125 0 0 chr2 69319508 69319812 -181368042 - AluSx SINE Alu -8 304 1 442 291 166 0 chr2 69321012 69321163 -181366691 + MER5A DNA MER1_type 13 188 -1 219 154 51 0 chr2 69321451 69321490 -181366364 + L2 LINE L2 3217 3257 -15 2038 125 0 29 chr2 69321684 69321995 -181365859 - AluSx SINE Alu -10 302 1 882 154 104 40 chr2 69322139 69322183 -181365671 + MER58A DNA MER1_type 1 41 -2379 1691 168 46 20 chr2 69322183 69322486 -181365368 - AluJo SINE Alu -1 311 1 882 154 104 40 chr2 69322486 69322642 -181365212 + MER58A DNA MER1_type 41 214 -10 2400 109 0 3 chr2 69322643 69322956 -181364898 + AluSx SINE Alu 1 312 0 324 232 71 121 chr2 69323028 69323226 -181364628 + L1ME4a LINE L1 5931 6118 -3 27 49 0 0 chr2 69323245 69323286 -181364568 + AT_rich Low_complexity Low_complexity 1 41 0 403 238 56 21 chr2 69323293 69323436 -181364418 - L1ME4a LINE L1 -5 6116 5969 363 325 62 19 chr2 69323446 69323606 -181364248 - L1ME4a LINE L1 -119 6002 5836 896 170 57 0 chr2 69323620 69323781 -181364073 - AluJb SINE Alu 0 302 134 1847 148 46 11 chr2 69323781 69324065 -181363789 - AluSx SINE Alu -18 294 1 557 342 10 13 chr2 69324073 69324383 -181363471 - L1ME4a LINE L1 -301 5820 5512 1959 142 6 40 chr2 69324457 69324780 -181363074 - AluJo SINE Alu 0 312 1 1865 186 10 0 chr2 69325913 69326219 -181361635 - 7SLRNA srpRNA srpRNA -4 316 8 301 308 58 17 chr2 69326569 69326689 -181361165 + L2 LINE L2 3142 3266 -6 526 234 63 46 chr2 69327144 69327319 -181360535 + MIR SINE MIR 72 249 -13 2519 44 10 0 chr2 69327329 69327626 -181360228 + AluY SINE Alu 1 300 -11 351 65 0 0 chr2 69328320 69328366 -181359488 + (TG)n Simple_repeat Simple_repeat 1 46 0 860 249 63 0 chr2 69330300 69330505 -181357349 + MER20 DNA MER1_type 2 219 0 2280 56 46 30 chr2 69331274 69331578 -181356276 + AluY SINE Alu 1 309 -2 2091 124 14 0 chr2 69332484 69332774 -181355080 + AluSg SINE Alu 1 294 -16 912 137 0 0 chr2 69332804 69332935 -181354919 + FLAM_C SINE Alu 2 132 -1 2568 67 0 6 chr2 69333098 69333411 -181354443 - AluY SINE Alu 0 311 1 2430 60 0 0 chr2 69333440 69333770 -181354084 + AluSg SINE Alu 2 331 0 395 145 0 14 chr2 69334422 69334491 -181353363 + L1MB7 LINE L1 6098 6165 -19 479 155 43 60 chr2 69334495 69334611 -181353243 + Zaphod DNA AcHobo 3906 4019 -12 396 305 48 88 chr2 69334679 69334837 -181353017 - L2 LINE L2 -436 2878 2715 2247 109 0 3 chr2 69334837 69335130 -181352724 - AluSg SINE Alu -18 292 1 396 305 48 88 chr2 69335130 69335413 -181352441 - L2 LINE L2 -599 2715 2455 184 282 92 101 chr2 69335477 69335892 -181351962 - L2 LINE L2 -1117 2197 1787 198 0 0 0 chr2 69335939 69335961 -181351893 + (T)n Simple_repeat Simple_repeat 1 22 0 2111 113 65 0 chr2 69336112 69336405 -181351449 - AluSx SINE Alu 0 312 1 22 0 0 0 chr2 69336413 69336435 -181351419 + AT_rich Low_complexity Low_complexity 1 22 0 1486 200 39 101 chr2 69337569 69337822 -181350032 - MLT1C LTR MaLR -4 463 254 1681 172 38 3 chr2 69337822 69338112 -181349742 - AluJb SINE Alu -10 302 3 1486 200 39 101 chr2 69338112 69338352 -181349502 - MLT1C LTR MaLR -213 254 1 382 288 166 0 chr2 69338353 69338492 -181349362 + MIR SINE MIR 85 246 -16 435 38 0 0 chr2 69338499 69338552 -181349302 + (CAT)n Simple_repeat Simple_repeat 3 55 0 207 296 19 0 chr2 69338991 69339045 -181348809 + MER5A DNA MER1_type 22 76 -113 595 238 125 42 chr2 69339209 69339305 -181348549 + MER5A DNA MER1_type 2 89 -100 970 195 76 116 chr2 69339305 69339685 -181348169 + MLT1A1 LTR MaLR 1 365 0 595 238 125 42 chr2 69339685 69339756 -181348098 + MER5A DNA MER1_type 89 183 -6 402 336 79 26 chr2 69340128 69340357 -181347497 + L3 LINE CR1 640 880 -697 357 100 13 227 chr2 69340390 69340452 -181347402 - L1MB3 LINE L1 -1 6179 6105 480 35 0 0 chr2 69340452 69340510 -181347344 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 2385 71 0 0 chr2 69340510 69340792 -181347062 - AluY SINE Alu -29 282 1 2096 124 0 0 chr2 69340793 69341068 -181346786 - AluSx SINE Alu -14 298 24 357 100 13 227 chr2 69341068 69341152 -181346702 - L1MB3 LINE L1 -73 6107 6062 729 96 0 0 chr2 69341184 69341278 -181346576 + AluY SINE Alu 2 95 -216 924 98 0 8 chr2 69341280 69341403 -181346451 + AluSc SINE Alu 173 294 -15 1738 104 25 8 chr2 69341487 69341728 -181346126 + AluSg SINE Alu 40 284 -26 469 314 198 24 chr2 69341790 69342163 -181345691 + L3 LINE CR1 946 1383 -194 389 220 69 13 chr2 69342201 69342360 -181345494 + (TATATG)n Simple_repeat Simple_repeat 1 168 0 2640 96 120 5 chr2 69342813 69343197 -181344657 - MSTA LTR MaLR 0 428 1 2259 90 33 0 chr2 69343930 69344229 -181343625 + AluY SINE Alu 1 309 -2 360 356 43 11 chr2 69344303 69344491 -181343363 + MIR3 SINE MIR 4 197 -11 471 222 119 111 chr2 69345320 69345572 -181342282 - MER102b DNA MER1_type -51 290 37 201 147 0 0 chr2 69345644 69345678 -181342176 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 1679 146 3 58 chr2 69345857 69346165 -181341689 - AluJb SINE Alu -21 291 1 333 119 119 0 chr2 69347850 69347917 -181339937 + MER3 DNA MER1_type 135 209 0 227 133 111 0 chr2 69347879 69347924 -181339930 - MER3 DNA MER1_type -119 90 41 * 2370 48 3 21 chr2 69348034 69348323 -181339531 + AluY SINE Alu 1 284 -27 5343 117 42 22 chr2 69348730 69348918 -181338936 - L1PA15 LINE L1 0 6165 5982 2381 74 10 7 chr2 69348918 69349214 -181338640 - AluSp SINE Alu -16 297 1 5343 117 42 22 chr2 69349214 69349993 -181337861 - L1PA15 LINE L1 -183 5982 5183 2340 100 3 0 chr2 69349993 69350292 -181337562 - AluSq SINE Alu -11 302 3 638 168 7 26 chr2 69350308 69350463 -181337391 + CT-rich Low_complexity Low_complexity 1 152 0 2205 92 4 0 chr2 69350474 69350755 -181337099 - AluSg SINE Alu -28 282 1 4623 190 4 20 chr2 69350755 69351733 -181336121 - L1PA15 LINE L1 -959 5187 4225 2071 120 13 22 chr2 69351733 69352049 -181335805 + AluSq SINE Alu 1 313 0 4623 190 4 20 chr2 69352049 69352104 -181335750 - L1PA15 LINE L1 -1921 4225 4171 2392 94 0 7 chr2 69352110 69352418 -181335436 - AluSx SINE Alu -6 306 1 22 70 0 0 chr2 69352471 69352514 -181335340 + AT_rich Low_complexity Low_complexity 1 43 0 1222 144 138 99 chr2 69352686 69352916 -181334938 + MLT1B LTR MaLR 22 272 -118 2181 131 3 6 chr2 69352916 69353229 -181334625 + AluJb SINE Alu 1 312 0 1222 144 138 99 chr2 69353229 69353353 -181334501 + MLT1B LTR MaLR 272 390 0 2716 33 0 0 chr2 69353358 69353660 -181334194 - AluY SINE Alu -9 302 1 201 286 41 0 chr2 69353878 69353927 -181333927 - MER5B DNA MER1_type -5 173 123 2171 81 25 56 chr2 69353947 69354269 -181333585 + AluSx SINE Alu 1 312 0 548 248 16 0 chr2 69354275 69354400 -181333454 + MER5B DNA MER1_type 50 176 -2 391 270 67 34 chr2 69354456 69354634 -181333220 + L2 LINE L2 3130 3313 0 2487 82 0 13 chr2 69354650 69354967 -181332887 + AluSq SINE Alu 1 313 0 234 97 0 0 chr2 69355865 69355926 -181331928 + Alu SINE Alu 249 309 0 2441 103 0 0 chr2 69356380 69356690 -181331164 - AluSx SINE Alu 0 312 3 1146 196 27 32 chr2 69357056 69357276 -181330578 + MER20 DNA MER1_type 1 219 0 202 250 30 149 chr2 69357428 69357596 -181330258 + L2 LINE L2 3044 3191 -81 2256 106 40 0 chr2 69357745 69358046 -181329808 - AluSq SINE Alu 0 313 1 351 68 169 0 chr2 69358114 69358173 -181329681 + L1MB2 LINE L1 5785 5853 -318 814 82 0 0 chr2 69358175 69358272 -181329582 - AluSq SINE Alu -107 206 110 1370 198 6 47 chr2 69358272 69358555 -181329299 + L1MB2 LINE L1 5851 6121 -50 2303 104 10 3 chr2 69358555 69358853 -181329001 + AluSx SINE Alu 1 300 -12 1370 198 6 47 chr2 69358853 69358887 -181328967 + L1MB2 LINE L1 6121 6155 -16 766 104 19 0 chr2 69359048 69359154 -181328700 + BC200 scRNA scRNA 11 118 -82 2236 113 0 0 chr2 69359184 69359499 -181328355 + AluSx SINE Alu 1 312 0 258 241 0 0 chr2 69360178 69360232 -181327622 + CT-rich Low_complexity Low_complexity 2 55 0 2675 23 7 3 chr2 69360427 69360729 -181327125 - AluY SINE Alu -8 303 1 2325 109 0 0 chr2 69361139 69361433 -181326421 - AluSx SINE Alu -18 294 1 990 171 0 0 chr2 69361641 69361793 -181326061 + AluJb SINE Alu 140 291 -21 1806 169 10 10 chr2 69361794 69362089 -181325765 + AluJo SINE Alu 1 295 -17 722 268 66 0 chr2 69362120 69362348 -181325506 - MIR SINE MIR 0 262 20 252 256 26 0 chr2 69362990 69363068 -181324786 + LTR67 LTR ERVL 478 557 0 942 112 0 0 chr2 69363519 69363644 -181324210 - AluSq/x SINE Alu -187 125 1 262 261 179 0 chr2 69363644 69363778 -181324076 - L1ME LINE L1 -341 5780 5623 933 203 0 23 chr2 69363790 69363967 -181323887 - FRAM SINE Alu -4 172 1 441 0 0 0 chr2 69364097 69364146 -181323708 + (TG)n Simple_repeat Simple_repeat 2 50 0 2192 106 0 27 chr2 69364146 69364439 -181323415 - AluSx SINE Alu -27 285 1 203 186 34 17 chr2 69364482 69364541 -181323313 + T-rich Low_complexity Low_complexity 2 61 0 2529 61 0 0 chr2 69364637 69364931 -181322923 + AluY SINE Alu 1 294 -17 243 0 0 0 chr2 69364991 69365018 -181322836 + (T)n Simple_repeat Simple_repeat 1 27 0 2089 130 13 0 chr2 69365058 69365358 -181322496 - AluSx SINE Alu -8 304 1 2345 98 0 0 chr2 69365718 69366014 -181321840 - AluY SINE Alu -15 296 1 2099 92 14 45 chr2 69366135 69366427 -181321427 - AluSx SINE Alu -29 283 1 424 0 0 0 chr2 69367148 69367195 -181320659 + (TTTA)n Simple_repeat Simple_repeat 2 124 0 2384 71 0 0 chr2 69367195 69367475 -181320379 - AluY SINE Alu -29 282 3 922 125 0 0 chr2 69367195 69367314 -181320540 - AluY SINE Alu -6 305 164 255 103 0 0 chr2 69367943 69367982 -181319872 + (TG)n Simple_repeat Simple_repeat 2 40 0 2187 152 64 91 chr2 69368021 69368102 -181319752 - MLT1D LTR MaLR 0 505 423 1523 192 20 24 chr2 69368102 69368399 -181319455 - AluJo SINE Alu -16 296 1 2187 152 64 91 chr2 69368399 69368514 -181319340 - MLT1D LTR MaLR -82 423 306 2431 68 3 7 chr2 69368514 69368810 -181319044 - AluY SINE Alu -15 296 2 2187 152 64 91 chr2 69368810 69369131 -181318723 - MLT1D LTR MaLR -199 306 1 350 272 134 10 chr2 69369301 69369406 -181318448 + MIR SINE MIR 30 146 -63 599 242 52 0 chr2 69369568 69369721 -181318133 - LTR16B LTR ERVL 0 464 304 1972 137 3 26 chr2 69370436 69370742 -181317112 - AluSx SINE Alu -13 299 1 836 222 6 0 chr2 69371387 69371563 -181316291 - MER5A DNA MER1_type -2 187 11 240 294 0 0 chr2 69371566 69371658 -181316196 - MER5B DNA MER1_type -2 176 85 906 120 60 0 chr2 69371694 69371827 -181316027 - AluJb SINE Alu -171 141 1 203 121 0 0 chr2 69371827 69371860 -181315994 - MER5B DNA MER1_type -73 105 73 26 30 0 0 chr2 69371923 69371956 -181315898 + AT_rich Low_complexity Low_complexity 1 33 0 2870 196 50 84 chr2 69371957 69372275 -181315579 - L1ME1 LINE L1 -15 6545 6218 2271 111 0 0 chr2 69372275 69372573 -181315281 - AluSx SINE Alu -14 298 1 2870 196 50 84 chr2 69372573 69373086 -181314768 - L1ME1 LINE L1 -342 6218 5742 1011 199 48 95 chr2 69373099 69373291 -181314563 - L1ME1 LINE L1 -3644 2896 2767 1462 213 7 23 chr2 69373291 69373592 -181314262 - AluJo SINE Alu -16 296 1 1011 199 48 95 chr2 69373592 69373831 -181314023 - L1ME1 LINE L1 -3773 2767 2518 270 339 53 6 chr2 69373828 69373999 -181313855 - L1ME1 LINE L1 -4291 2249 2071 * 762 245 14 9 chr2 69374034 69374250 -181313604 + L1MDb LINE L1 1159 1375 -5034 2366 204 69 92 chr2 69374280 69374791 -181313063 - L1ME1 LINE L1 -4537 2003 1482 2318 105 3 3 chr2 69374791 69375096 -181312758 - AluSp SINE Alu -8 305 1 2366 204 69 92 chr2 69375096 69375163 -181312691 - L1ME1 LINE L1 -5058 1482 1415 1935 147 0 0 chr2 69375163 69375455 -181312399 - AluSx SINE Alu 0 312 21 2366 204 69 92 chr2 69375455 69375521 -181312333 - L1ME1 LINE L1 -5125 1415 1349 220 26 26 26 chr2 69375521 69375559 -181312295 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2366 204 69 92 chr2 69375559 69376040 -181311814 - L1ME1 LINE L1 -5191 1349 937 306 271 165 35 chr2 69376119 69376289 -181311565 - L1ME1 LINE L1 -5609 921 730 282 56 0 0 chr2 69376549 69376585 -181311269 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 322 335 50 34 chr2 69376620 69376925 -181310929 - L1ME1 LINE L1 -5912 618 10 320 311 38 0 chr2 69379869 69379975 -181307879 - L2 LINE L2 0 3272 3163 6020 68 22 43 chr2 69380017 69381642 -181306212 - SVA Other Other -645 1386 114 814 108 34 69 chr2 69381885 69382350 -181305504 - SVA Other Other -520 866 592 5562 60 14 63 chr2 69382373 69383225 -181304629 - SVA Other Other -520 866 57 270 0 0 0 chr2 69383225 69383255 -181304599 + (GGGAGA)n Simple_repeat Simple_repeat 1 30 0 2431 77 3 0 chr2 69383502 69383799 -181304055 + AluSp SINE Alu 1 298 -15 324 252 132 31 chr2 69385059 69385218 -181302636 - MLT1L LTR MaLR -9 606 432 406 274 54 43 chr2 69385297 69385483 -181302371 - MLT1L LTR MaLR -302 313 126 426 273 107 36 chr2 69385585 69385838 -181302016 - LTR16A LTR ERVL -23 427 157 192 186 0 23 chr2 69386236 69386279 -181301575 + L2 LINE L2 3272 3313 0 225 0 0 0 chr2 69386349 69386374 -181301480 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 234 0 0 0 chr2 69386373 69386399 -181301455 + (TG)n Simple_repeat Simple_repeat 1 26 0 348 103 0 0 chr2 69386399 69386457 -181301397 + (GA)n Simple_repeat Simple_repeat 2 59 0 680 234 57 6 chr2 69386650 69386825 -181301029 - Charlie8 DNA MER1_type -2185 232 49 1004 158 147 0 chr2 69386847 69387037 -181300817 + MER20 DNA MER1_type 1 218 -1 4583 150 20 19 chr2 69387188 69387996 -181299858 + L1MB2 LINE L1 5363 6171 0 2294 99 10 3 chr2 69388311 69388613 -181299241 + AluSp SINE Alu 1 304 -9 218 116 0 47 chr2 69388881 69388924 -181298930 + (AGGGGG)n Simple_repeat Simple_repeat 3 43 0 410 0 20 0 chr2 69389689 69389739 -181298115 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 1053 168 0 22 chr2 69391138 69391317 -181296537 - FRAM SINE Alu -1 175 1 2316 102 0 3 chr2 69391358 69391662 -181296192 - AluSx SINE Alu 0 312 10 500 312 35 0 chr2 69392647 69392817 -181295037 + LTR16A1 LTR ERVL 280 455 -2 333 0 0 0 chr2 69394540 69394577 -181293277 + (CA)n Simple_repeat Simple_repeat 2 38 0 573 219 75 7 chr2 69395444 69395590 -181292264 + MER117 DNA MER1_type 2 157 -40 270 271 158 23 chr2 69396155 69396421 -181291433 - L1ME4a LINE L1 0 6121 5820 893 283 48 77 chr2 69396634 69396834 -181291020 - L1MC4a LINE L1 -1884 5924 5720 1340 182 40 68 chr2 69396834 69397130 -181290724 - AluJb SINE Alu -24 288 1 893 283 48 77 chr2 69397130 69397619 -181290235 - L1MC4a LINE L1 -2088 5720 5255 443 266 74 70 chr2 69397920 69398364 -181289490 - L1MC4a LINE L1 -1214 4932 4487 699 316 73 17 chr2 69398370 69398728 -181289126 - L1ME4a LINE L1 -286 5835 5458 365 288 107 13 chr2 69401031 69401264 -181286590 + MIR SINE MIR 2 256 -6 339 271 66 50 chr2 69401688 69401869 -181285985 + MIR SINE MIR 28 211 -51 1480 141 22 69 chr2 69402119 69402395 -181285459 - AluJo SINE Alu -11 301 39 743 150 8 16 chr2 69402909 69403036 -181284818 + FLAM_A SINE Alu 1 126 -7 306 288 147 6 chr2 69403567 69403730 -181284124 - MER91B DNA MER1_type -4 186 1 287 284 184 43 chr2 69403734 69404157 -181283697 - L2 LINE L2 -365 2949 2467 497 298 153 41 chr2 69404157 69404839 -181283015 - L2 LINE L2 -1193 2121 1364 515 250 116 110 chr2 69405136 69405672 -181282182 + LTR67 LTR ERVL 19 557 0 2328 113 0 3 chr2 69406062 69406372 -181281482 + AluSg SINE Alu 1 309 -1 795 279 107 68 chr2 69406784 69408674 -181279180 + L1ME1 LINE L1 2519 4578 -1568 2278 114 0 0 chr2 69408674 69408971 -181278883 - AluSx SINE Alu -15 297 1 795 279 107 68 chr2 69408971 69409288 -181278566 + L1ME1 LINE L1 4578 4881 -1265 1646 242 78 53 chr2 69409294 69409855 -181277999 + MLT1G1 LTR MaLR 1 575 -20 359 316 80 31 chr2 69409869 69410362 -181277492 + L1ME1 LINE L1 4957 5507 -671 2182 154 62 66 chr2 69410362 69410829 -181277025 - MLT1C LTR MaLR -2 465 1 359 316 80 31 chr2 69410829 69410989 -181276865 + L1ME1 LINE L1 5507 5658 -520 707 132 74 8 chr2 69411020 69411141 -181276713 - AluSq/x SINE Alu -180 133 5 367 338 19 9 chr2 69411170 69411380 -181276474 + L1ME1 LINE L1 5679 5890 -276 1993 142 0 17 chr2 69411683 69411972 -181275882 - AluSx SINE Alu -28 284 1 1906 155 17 0 chr2 69412532 69412822 -181275032 + AluJb SINE Alu 1 295 -17 2293 102 0 7 chr2 69413363 69413668 -181274186 - AluY SINE Alu -8 303 1 4246 127 18 43 chr2 69413856 69413969 -181273885 - L1MA6 LINE L1 -10 6290 6176 2326 109 0 3 chr2 69413969 69414271 -181273583 - AluSq SINE Alu -12 301 1 4246 127 18 43 chr2 69414271 69414325 -181273529 - L1MA6 LINE L1 -124 6176 6122 1985 150 6 13 chr2 69414325 69414639 -181273215 - AluJo SINE Alu 0 312 1 4246 127 18 43 chr2 69414639 69415229 -181272625 - L1MA6 LINE L1 -178 6122 5551 846 219 99 5 chr2 69415442 69415634 -181272220 + MER58C DNA MER1_type 3 212 -3 570 286 35 0 chr2 69415724 69415895 -181271959 - MIR SINE MIR -5 257 81 222 254 15 15 chr2 69415931 69415998 -181271856 + MIR SINE MIR 10 76 -186 249 159 0 0 chr2 69416283 69416327 -181271527 + (TG)n Simple_repeat Simple_repeat 1 44 0 892 238 19 19 chr2 69416819 69417025 -181270829 - MER63A DNA MER1_type -2 208 3 243 61 0 0 chr2 69417275 69417308 -181270546 + (TG)n Simple_repeat Simple_repeat 1 33 0 206 295 116 0 chr2 69418838 69418933 -181268921 - MIR3 SINE MIR -5 203 98 314 281 78 47 chr2 69420198 69420390 -181267464 - L2 LINE L2 0 3313 3116 245 250 79 13 chr2 69420503 69420579 -181267275 - MIR SINE MIR -110 98 18 2662 40 0 0 chr2 69421509 69421808 -181266046 - AluSc SINE Alu -10 299 1 2555 28 0 74 chr2 69422402 69422728 -181265126 + AluY SINE Alu 1 302 -9 653 146 18 18 chr2 69423353 69423463 -181264391 + MLT1B LTR MaLR 2 111 -279 1771 158 34 0 chr2 69423502 69423793 -181264061 + AluJo SINE Alu 12 312 0 2367 84 3 0 chr2 69423810 69424107 -181263747 + AluY SINE Alu 1 298 -13 1089 144 45 30 chr2 69424111 69424312 -181263542 + MLT1B LTR MaLR 112 315 -75 240 149 21 0 chr2 69424284 69424331 -181263523 + MSTC LTR MaLR 322 369 -59 * 1969 137 31 3 chr2 69424439 69424731 -181263123 - AluSx SINE Alu -12 300 1 216 163 0 0 chr2 69425958 69426001 -181261853 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 275 102 61 0 chr2 69426237 69426286 -181261568 - Charlie7 DNA MER1_type -2511 101 50 220 257 0 43 chr2 69426407 69426477 -181261377 - L2 LINE L2 -8 3264 3198 2242 97 0 17 chr2 69426593 69426891 -181260963 + AluSx SINE Alu 1 293 -19 2027 134 3 34 chr2 69427059 69427380 -181260474 - AluJo SINE Alu -1 311 1 397 221 19 19 chr2 69428370 69428474 -181259380 + MER5A DNA MER1_type 9 112 -77 246 394 51 0 chr2 69428612 69428749 -181259105 + L2 LINE L2 3116 3259 -13 210 259 52 0 chr2 69428783 69428841 -181259013 + L2 LINE L2 3248 3308 -5 181 229 0 0 chr2 69428883 69428918 -181258936 + L2 LINE L2 3227 3261 -11 222 333 18 9 chr2 69429808 69429922 -181257932 - MIR SINE MIR -64 144 30 269 216 0 14 chr2 69430641 69430715 -181257139 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 336 264 36 43 chr2 69432669 69432809 -181255045 - MIR SINE MIR 0 262 124 329 311 112 21 chr2 69433092 69433378 -181254476 - L1ME LINE L1 -544 5577 5266 291 346 50 6 chr2 69433666 69433825 -181254029 + L2 LINE L2 2873 3038 -234 1135 188 28 0 chr2 69433828 69434041 -181253813 + MER20 DNA MER1_type 1 219 0 899 206 54 5 chr2 69434319 69434523 -181253331 + MIR SINE MIR 2 215 -47 182 156 0 0 chr2 69437914 69437946 -181249908 - L3 LINE CR1 -311 1266 1235 2011 123 51 3 chr2 69438260 69438552 -181249302 + AluSx SINE Alu 1 306 -6 198 307 158 0 chr2 69438790 69438917 -181248937 + MIR SINE MIR 110 256 -6 863 224 15 0 chr2 69439201 69439397 -181248457 - MIR SINE MIR -32 230 32 2785 10 0 10 chr2 69441202 69441511 -181246343 + AluYa5 SINE Alu 1 306 -5 243 0 0 0 chr2 69441585 69441612 -181246242 + (CA)n Simple_repeat Simple_repeat 2 28 0 207 0 0 0 chr2 69441611 69441634 -181246220 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 618 209 52 20 chr2 69442414 69442567 -181245287 - L1ME3A LINE L1 -5 6165 6008 2082 148 0 0 chr2 69442961 69443259 -181244595 - AluSx SINE Alu -14 298 1 646 186 10 126 chr2 69446483 69446682 -181241172 + MER5B DNA MER1_type 1 176 -2 1156 243 106 50 chr2 69447375 69447811 -181240043 + MLT1J LTR MaLR 3 462 -49 2218 113 0 7 chr2 69449206 69449508 -181238346 + AluSg SINE Alu 1 300 -10 237 196 71 0 chr2 69449518 69449574 -181238280 + MLT1J LTR MaLR 452 511 0 1747 192 3 0 chr2 69450934 69451226 -181236628 + AluJo SINE Alu 1 293 -19 781 249 70 19 chr2 69451266 69451479 -181236375 + MLT1J LTR MaLR 45 268 -243 425 254 35 0 chr2 69451487 69451601 -181236253 + MLT1J LTR MaLR 384 501 -10 1115 72 26 0 chr2 69451751 69451904 -181235950 - L1MA6 LINE L1 0 6300 6144 249 33 0 0 chr2 69452242 69452272 -181235582 + (TG)n Simple_repeat Simple_repeat 2 31 0 1119 291 106 18 chr2 69452612 69453111 -181234743 + MLT1L LTR MaLR 47 589 -26 627 220 153 0 chr2 69453623 69453773 -181234081 + MER5A DNA MER1_type 11 183 -6 28 71 0 0 chr2 69454139 69454195 -181233659 + AT_rich Low_complexity Low_complexity 1 56 0 381 243 61 68 chr2 69454273 69454586 -181233268 - L1MC4a LINE L1 -298 5823 5733 250 246 33 0 chr2 69454789 69454850 -181233004 - MLT1J1 LTR MaLR -127 319 257 373 198 188 0 chr2 69454869 69454970 -181232884 - MLT1J1 LTR MaLR -326 120 1 554 298 39 48 chr2 69454970 69455277 -181232577 - L1MC4a LINE L1 -2193 5615 5309 2030 126 7 7 chr2 69455277 69455607 -181232247 - AluSx SINE Alu 0 330 1 554 298 39 48 chr2 69455607 69455634 -181232220 - L1MC4a LINE L1 -2499 5309 5283 1488 242 17 17 chr2 69455736 69456096 -181231758 - LTR16A LTR ERVL 0 450 91 836 293 82 20 chr2 69456315 69456998 -181230856 - L1MDb LINE L1 -4500 1926 1219 1618 254 20 20 chr2 69457003 69457444 -181230410 - L1MDb LINE L1 -5627 789 349 235 185 19 0 chr2 69457444 69457498 -181230356 - L1M2 LINE L1 -4376 2473 2419 2113 203 7 38 chr2 69457588 69457961 -181229893 - MER70A LTR ERVL -67 405 45 2959 3 0 0 chr2 69457961 69458272 -181229582 + AluYa5 SINE Alu 1 311 0 2113 203 7 38 chr2 69458272 69458316 -181229538 - MER70A LTR ERVL -427 45 1 267 284 12 48 chr2 69458316 69458471 -181229383 - L1ME LINE L1 -4716 1666 1436 284 276 56 43 chr2 69459157 69459359 -181228495 - L1ME LINE L1 -5863 509 305 1258 168 3 18 chr2 69459516 69459827 -181228027 + MER2 DNA MER2_type 3 345 0 714 191 71 50 chr2 69460767 69461050 -181226804 + L1MC5 LINE L1 7410 7698 -263 347 149 194 0 chr2 69461159 69461226 -181226628 - AluS SINE Alu -219 84 5 253 118 0 59 chr2 69461234 69461285 -181226569 + L1MB2 LINE L1 6124 6171 0 745 104 19 0 chr2 69461326 69461432 -181226422 + BC200 scRNA scRNA 11 118 -82 2210 107 0 0 chr2 69461462 69461767 -181226087 + AluSx SINE Alu 1 305 0 230 226 19 0 chr2 69462456 69462509 -181225345 + CT-rich Low_complexity Low_complexity 2 55 0 2318 109 0 0 chr2 69463106 69463400 -181224454 - AluSx SINE Alu -18 294 1 963 178 0 0 chr2 69463608 69463760 -181224094 + AluJb SINE Alu 140 291 -21 1763 173 10 10 chr2 69463761 69464056 -181223798 + AluJo SINE Alu 1 295 -17 379 241 45 0 chr2 69464095 69464207 -181223647 - MIR SINE MIR -9 253 137 648 228 14 18 chr2 69514228 69514447 -181173407 + L1MC5 LINE L1 7709 7926 -35 445 333 12 56 chr2 69514867 69515116 -181172738 - MIR SINE MIR -4 258 21 385 202 11 0 chr2 69516755 69516844 -181171010 - LTR16A1 LTR ERVL -40 417 328 852 277 109 0 chr2 69516855 69517122 -181170732 - MLT1G1 LTR MaLR -12 583 288 2287 130 28 22 chr2 69517296 69517658 -181170196 + THE1B LTR MaLR 1 364 0 840 143 0 30 chr2 69517798 69517931 -181169923 - FLAM_C SINE Alu -2 131 3 361 210 103 79 chr2 69518320 69518534 -181169320 + HAL1b LINE L1 208 426 -922 267 233 68 10 chr2 69519363 69519466 -181168388 + L1ME4a LINE L1 5957 6065 -56 25 51 0 0 chr2 69519717 69519756 -181168098 + AT_rich Low_complexity Low_complexity 1 39 0 2266 94 3 3 chr2 69519840 69520137 -181167717 + AluSq SINE Alu 1 297 -16 235 143 65 13 chr2 69520213 69520290 -181167564 + (TATAA)n Simple_repeat Simple_repeat 3 83 0 378 312 95 42 chr2 69520380 69520569 -181167285 - MIR3 SINE MIR -9 199 1 2301 67 11 3 chr2 69521011 69521336 -181166518 + AluSp SINE Alu 1 327 0 384 313 0 9 chr2 69524952 69525067 -181162787 - MIR SINE MIR -113 149 36 480 319 18 12 chr2 69526568 69526731 -181161123 + MIR SINE MIR 88 251 -11 1675 220 48 50 chr2 69527224 69527642 -181160212 + MLT1C LTR MaLR 6 424 -43 2181 121 0 3 chr2 69527642 69527940 -181159914 - AluSx SINE Alu -15 297 1 1675 220 48 50 chr2 69527940 69527984 -181159870 + MLT1C LTR MaLR 424 467 0 188 250 181 104 chr2 69528703 69528847 -181159007 - L2 LINE L2 -3 3269 3115 708 256 32 23 chr2 69528847 69529066 -181158788 - MIR SINE MIR -3 259 39 244 306 226 65 chr2 69529097 69529283 -181158571 + MIR SINE MIR 13 228 -34 379 200 0 25 chr2 69530007 69530087 -181157767 + L2 LINE L2 2987 3064 -208 180 0 0 0 chr2 69531229 69531249 -181156605 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 340 276 52 37 chr2 69531401 69531535 -181156319 + MIR SINE MIR 11 146 -116 27 0 0 0 chr2 69531688 69531715 -181156139 + AT_rich Low_complexity Low_complexity 1 27 0 30 0 0 0 chr2 69531812 69531842 -181156012 + AT_rich Low_complexity Low_complexity 1 30 0 970 166 60 40 chr2 69531842 69532041 -181155813 - AluJo SINE Alu -24 288 86 699 213 156 14 chr2 69532041 69532252 -181155602 - L1MC4a LINE L1 -1982 5826 5586 251 308 30 24 chr2 69532405 69532523 -181155331 + MIR SINE MIR 20 139 -69 181 220 60 20 chr2 69532521 69532571 -181155283 + L2 LINE L2 3258 3309 -4 * 806 216 0 65 chr2 69532835 69532960 -181154894 + MER5B DNA MER1_type 1 112 -66 2337 102 7 0 chr2 69532960 69533265 -181154589 - AluSq SINE Alu -6 307 1 806 216 0 65 chr2 69533265 69533324 -181154530 + MER5B DNA MER1_type 112 173 -5 181 235 59 44 chr2 69533571 69533639 -181154215 - L2 LINE L2 0 3272 3204 1308 139 5 19 chr2 69536906 69537114 -181150740 + L1PA16 LINE L1 5962 6166 0 8699 209 61 55 chr2 69538018 69539627 -181148227 + L1MD2 LINE L1 2533 4131 -2228 315 0 0 0 chr2 69539627 69539662 -181148192 + (CA)n Simple_repeat Simple_repeat 2 36 0 8699 209 61 55 chr2 69539662 69541641 -181146213 + L1MD2 LINE L1 4131 6139 -220 447 63 0 0 chr2 69541641 69541704 -181146150 + (CA)n Simple_repeat Simple_repeat 2 64 0 8699 209 61 55 chr2 69541704 69541913 -181145941 + L1MD2 LINE L1 6139 6345 -14 2412 83 10 0 chr2 69543044 69543357 -181144497 - THE1B LTR MaLR -48 316 1 618 293 73 0 chr2 69543830 69544021 -181143833 - L2 LINE L2 -280 3033 2829 2490 231 20 4 chr2 69544040 69544578 -181143276 + L1ME3 LINE L1 5616 6162 0 830 300 119 3 chr2 69544612 69544965 -181142889 - L2 LINE L2 -496 2818 2425 602 207 165 58 chr2 69545023 69545367 -181142487 + MLT1J LTR MaLR 81 496 -15 269 257 191 0 chr2 69545391 69545496 -181142358 - L2 LINE L2 -986 2328 2204 578 176 26 20 chr2 69546679 69546832 -181141022 + CT-rich Low_complexity Low_complexity 2 155 0 707 22 33 0 chr2 69546837 69546928 -181140926 + (TTTTC)n Simple_repeat Simple_repeat 3 96 0 1584 163 0 0 chr2 69546928 69547167 -181140687 - AluSx SINE Alu -34 278 40 258 223 16 50 chr2 69547341 69547358 -181140496 + (TAA)n Simple_repeat Simple_repeat 3 19 -100 2172 143 56 26 chr2 69547358 69547735 -181140119 - MLT1B LTR MaLR 0 390 3 258 223 16 50 chr2 69547735 69547838 -181140016 + (TAA)n Simple_repeat Simple_repeat 19 119 0 474 273 210 0 chr2 69547846 69548051 -181139803 - MIR SINE MIR -12 250 3 324 0 0 0 chr2 69549014 69549050 -181138804 + (TG)n Simple_repeat Simple_repeat 1 36 0 442 209 22 0 chr2 69550276 69550367 -181137487 + MER5A DNA MER1_type 9 101 -88 2206 127 55 19 chr2 69550387 69550749 -181137105 + THE1C LTR MaLR 1 375 0 328 310 47 16 chr2 69551172 69551301 -181136553 + MIR3 SINE MIR 72 204 -4 437 268 20 71 chr2 69552636 69552834 -181135020 - MER5A DNA MER1_type -1 188 1 2037 66 0 0 chr2 69552929 69553172 -181134682 - L1PA5 LINE L1 0 6154 5912 935 270 42 0 chr2 69553266 69553503 -181134351 + MIR SINE MIR 10 256 -6 537 232 155 7 chr2 69554280 69554435 -181133419 - MER5B DNA MER1_type 0 178 1 1228 184 33 5 chr2 69554580 69554792 -181133062 + MER20 DNA MER1_type 2 219 0 256 326 11 22 chr2 69554795 69554887 -181132967 - MIR3 SINE MIR -51 157 67 384 40 0 0 chr2 69555378 69555428 -181132426 + (TG)n Simple_repeat Simple_repeat 2 51 0 502 257 53 47 chr2 69555699 69555870 -181131984 - MER5B DNA MER1_type -6 172 1 599 230 26 7 chr2 69555878 69556030 -181131824 - MER5B DNA MER1_type -1 177 23 231 146 0 0 chr2 69557155 69557196 -181130658 + (GA)n Simple_repeat Simple_repeat 1 41 0 550 287 30 0 chr2 69558638 69558802 -181129052 - MIR SINE MIR -31 231 63 557 238 106 13 chr2 69559628 69559779 -181128075 - MIR SINE MIR -23 239 75 2375 219 38 126 chr2 69559784 69560674 -181127180 + MER21B LTR ERV1 1 812 -51 25 31 0 0 chr2 69561213 69561245 -181126609 + AT_rich Low_complexity Low_complexity 1 32 0 364 307 2 0 chr2 69561350 69561476 -181126378 + HAL1b LINE L1 457 1667 -791 23 54 0 0 chr2 69561642 69561679 -181126175 + AT_rich Low_complexity Low_complexity 1 37 0 2193 122 3 16 chr2 69562845 69563157 -181124697 + AluSx SINE Alu 1 308 -4 503 288 84 10 chr2 69563338 69563694 -181124160 - MLT1I LTR MaLR -18 391 1 1055 260 20 4 chr2 69564148 69564402 -181123452 + MIR SINE MIR 4 261 -1 313 360 103 32 chr2 69564403 69564656 -181123198 + L2 LINE L2 2999 3269 -3 686 211 76 52 chr2 69564668 69564956 -181122898 + MLT1J2 LTR MaLR 2 334 -116 4152 114 18 34 chr2 69565919 69566541 -181121313 - LTR9 LTR ERV1 0 612 1 2175 117 0 3 chr2 69566791 69567091 -181120763 - AluSx SINE Alu -13 299 1 611 250 15 0 chr2 69567568 69567700 -181120154 + MER94 DNA DNA 1 134 0 362 314 91 57 chr2 69567840 69568212 -181119642 + MLT1J2 LTR MaLR 65 449 -1 197 293 93 27 chr2 69568264 69568339 -181119515 - L2 LINE L2 -59 3213 3134 27 0 0 0 chr2 69568578 69568605 -181119249 + AT_rich Low_complexity Low_complexity 1 27 0 6364 72 6 6 chr2 69568621 69570335 -181117519 - L1PA13 LINE L1 -1 6162 4493 348 64 0 0 chr2 69571004 69571051 -181116803 + (CA)n Simple_repeat Simple_repeat 2 48 0 219 348 8 42 chr2 69571053 69571171 -181116683 - MIR3 SINE MIR -84 124 11 196 197 279 0 chr2 69572056 69572117 -181115737 - MER5A DNA MER1_type -4 185 108 510 230 133 7 chr2 69572410 69572545 -181115309 + MER5A DNA MER1_type 1 152 -37 601 294 63 38 chr2 69572618 69573012 -181114842 - L1ME4a LINE L1 -70 6051 5648 367 205 0 72 chr2 69574725 69574808 -181113046 + MER81 DNA DNA 1 77 -37 2263 71 3 27 chr2 69575143 69575438 -181112416 - AluY SINE Alu -23 288 1 374 314 75 53 chr2 69576827 69577203 -181110651 - L2 LINE L2 -434 2880 2497 1247 252 86 25 chr2 69577507 69578002 -181109852 - MLT1L LTR MaLR 0 615 16 23 0 0 0 chr2 69578141 69578164 -181109690 + AT_rich Low_complexity Low_complexity 1 23 0 338 175 50 12 chr2 69578235 69578315 -181109539 - MIR SINE MIR -119 143 61 2319 200 58 69 chr2 69578340 69579139 -181108715 - L1MC5 LINE L1 -44 7917 7128 3215 194 30 30 chr2 69580106 69580739 -181107115 + MER82 DNA MER2_type 3 635 -18 274 240 0 0 chr2 69582303 69582353 -181105501 + MER82 DNA MER2_type 516 565 -88 288 0 0 0 chr2 69582402 69582434 -181105420 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1214 85 11 0 chr2 69582682 69582858 -181104996 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 2088 138 3 0 chr2 69582858 69583163 -181104691 - AluSx SINE Alu -5 307 2 1072 209 32 18 chr2 69584490 69584710 -181103144 - MER58A DNA MER1_type 0 224 2 2555 216 18 10 chr2 69585203 69585704 -181102150 - MLT1D LTR MaLR 0 505 1 207 319 149 43 chr2 69585865 69586006 -181101848 + MIR3 SINE MIR 3 158 -50 1399 148 26 4 chr2 69586313 69586542 -181101312 - L1MB3 LINE L1 -8 6175 5942 548 294 98 36 chr2 69586585 69586973 -181100881 + L1ME4a LINE L1 5643 6054 -67 6364 32 0 35 chr2 69587544 69588290 -181099564 - L1PA5 LINE L1 -1 6153 5434 22 0 0 0 chr2 69588838 69588860 -181098994 + AT_rich Low_complexity Low_complexity 1 22 0 191 361 0 19 chr2 69589569 69589677 -181098177 - MER5B DNA MER1_type -50 128 23 1493 157 82 4 chr2 69589721 69590001 -181097853 - MSTA LTR MaLR -5 423 122 1356 122 13 15 chr2 69590001 69590303 -181097551 + THE1C LTR MaLR 1 375 0 859 166 35 0 chr2 69590303 69590428 -181097426 - MSTA LTR MaLR -298 130 1 10406 150 23 16 chr2 69590428 69590770 -181097084 - MSTA-int LTR MaLR 0 1651 1313 2089 147 0 6 chr2 69590770 69591084 -181096770 - AluSx SINE Alu 0 312 1 10406 150 23 16 chr2 69591084 69592380 -181095474 - MSTA-int LTR MaLR -338 1313 1 2618 151 31 7 chr2 69592380 69592798 -181095056 - MSTA LTR MaLR 0 428 1 483 326 134 22 chr2 69593288 69593626 -181094228 + L3 LINE CR1 466 857 -720 234 91 0 0 chr2 69593626 69593659 -181094195 + (CCAA)n Simple_repeat Simple_repeat 4 36 0 483 326 134 22 chr2 69593659 69593722 -181094132 + L3 LINE CR1 857 912 -665 384 233 0 95 chr2 69593741 69593802 -181094052 - L2 LINE L2 0 3313 3267 1064 173 138 24 chr2 69593802 69594091 -181093763 + MER33 DNA MER1_type 2 323 -1 384 233 0 95 chr2 69594091 69594145 -181093709 - L2 LINE L2 -46 3267 3209 630 271 182 28 chr2 69594146 69594801 -181093053 - L2 LINE L2 -1 3312 2463 262 250 56 0 chr2 69595074 69595146 -181092708 + L3 LINE CR1 1397 1472 -105 366 297 135 36 chr2 69595651 69595843 -181092011 + MIR SINE MIR 4 214 -48 1909 71 38 127 chr2 69595847 69596187 -181091667 + L1MA2 LINE L1 5994 6303 -1 487 220 27 60 chr2 69596307 69596457 -181091397 - MIR3 SINE MIR -11 197 53 1076 170 100 5 chr2 69596593 69596793 -181091061 + MER20 DNA MER1_type 1 219 0 421 322 55 0 chr2 69597352 69597535 -181090319 - L1ME LINE L1 -412 5709 5517 1260 277 77 7 chr2 69598327 69598757 -181089097 + L1ME LINE L1 5326 5785 -336 297 179 18 18 chr2 69598826 69598882 -181088972 + MER5A DNA MER1_type 128 183 -6 239 314 12 12 chr2 69598985 69599071 -181088783 + MER5B DNA MER1_type 91 176 -2 490 209 9 17 chr2 69599469 69599584 -181088270 - LTR33 LTR ERVL 0 521 408 2321 224 20 15 chr2 69599716 69600257 -181087597 + MER74A LTR ERVL 1 544 -14 538 238 33 7 chr2 69600324 69600475 -181087379 - LTR33 LTR ERVL -341 180 26 180 0 0 0 chr2 69601191 69601211 -181086643 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 1634 165 4 11 chr2 69601211 69601477 -181086377 - AluJb SINE Alu -40 272 9 234 91 0 0 chr2 69602883 69602916 -181084938 + (CATA)n Simple_repeat Simple_repeat 4 36 0 236 180 20 0 chr2 69603759 69603809 -181084045 - L1MC4 LINE L1 -1343 6699 6649 5430 47 6 23 chr2 69603915 69604575 -181083279 - L1PA7 LINE L1 -1 6153 5505 247 295 39 13 chr2 69604662 69604740 -181083114 - MIR SINE MIR 0 262 183 1135 257 90 16 chr2 69604892 69605258 -181082596 - MLT1E LTR MaLR 0 593 201 582 161 109 212 chr2 69605432 69605569 -181082285 - MLT1E LTR MaLR -427 166 17 208 234 13 78 chr2 69605603 69605680 -181082174 - L2 LINE L2 -10 3303 3232 181 344 57 52 chr2 69605679 69605891 -181081963 + L2 LINE L2 2847 3059 -213 * 198 189 0 0 chr2 69606047 69606084 -181081770 + L2 LINE L2 3231 3267 -5 1831 162 3 20 chr2 69607523 69607826 -181080028 - AluJb SINE Alu -14 298 1 21 36 0 0 chr2 69608332 69608360 -181079494 + AT_rich Low_complexity Low_complexity 1 28 0 21 95 0 0 chr2 69608478 69608541 -181079313 + AT_rich Low_complexity Low_complexity 1 63 0 812 124 35 89 chr2 69608661 69608830 -181079024 + MER20 DNA MER1_type 2 161 -58 2023 176 44 74 chr2 69608863 69609364 -181078490 - MLT1D LTR MaLR -14 491 6 307 188 31 0 chr2 69609365 69609429 -181078425 + MER20 DNA MER1_type 154 219 0 246 32 0 0 chr2 69610172 69610203 -181077651 + (TG)n Simple_repeat Simple_repeat 1 31 0 1103 184 11 0 chr2 69611393 69611578 -181076276 - MER5A DNA MER1_type -2 187 1 213 295 39 0 chr2 69611603 69611681 -181076173 + MIR SINE MIR 49 129 -133 232 284 149 22 chr2 69611684 69611754 -181076100 + MER5A DNA MER1_type 37 97 -92 1996 128 14 0 chr2 69611754 69612043 -181075811 - AluSx SINE Alu -19 293 1 232 284 149 22 chr2 69612043 69612106 -181075748 + MER5A DNA MER1_type 97 187 -2 404 243 118 7 chr2 69612107 69612243 -181075611 + MIR SINE MIR 102 252 -10 1860 179 70 24 chr2 69612564 69612977 -181074877 - MSTB1 LTR MaLR 0 432 1 259 245 10 61 chr2 69613407 69613505 -181074349 + MIR SINE MIR 88 180 -82 297 241 58 0 chr2 69614722 69614809 -181073045 + LTR67 LTR ERVL 466 557 0 2573 113 31 6 chr2 69615270 69615625 -181072229 - THE1B LTR MaLR 0 364 1 186 133 0 0 chr2 69615951 69615981 -181071873 + (CA)n Simple_repeat Simple_repeat 2 31 0 289 270 68 0 chr2 69616982 69617056 -181070798 + L2 LINE L2 3226 3304 -9 232 227 0 0 chr2 69617058 69617102 -181070752 + GA-rich Low_complexity Low_complexity 2 45 0 222 366 94 10 chr2 69617404 69617606 -181070248 + L2 LINE L2 2155 2373 -941 337 292 11 0 chr2 69617975 69618064 -181069790 + MER81 DNA DNA 25 114 0 250 309 242 0 chr2 69618872 69619021 -181068833 + MIR SINE MIR 41 225 -37 1682 170 104 21 chr2 69619112 69619447 -181068407 - MLT1A2 LTR MaLR -5 369 7 22 0 0 0 chr2 69619502 69619524 -181068330 + AT_rich Low_complexity Low_complexity 1 22 0 450 263 167 40 chr2 69621710 69621938 -181065916 - MIR SINE MIR 0 262 6 2020 150 63 20 chr2 69622253 69622689 -181065165 + MER31A LTR ERV1 1 466 0 2100 141 0 0 chr2 69623585 69623882 -181063972 + AluJb SINE Alu 1 297 -15 2388 93 0 0 chr2 69623954 69624255 -181063599 - AluY SINE Alu -10 301 1 197 227 0 0 chr2 69625582 69625626 -181062228 - MIR SINE MIR -108 154 111 272 205 0 39 chr2 69627098 69627176 -181060678 - HsTC2 DNA Tc2 -2 1896 1822 575 260 109 70 chr2 69627199 69627363 -181060491 + L1MEd LINE L1 318 474 -5645 1915 187 23 0 chr2 69627363 69627716 -181060138 + MER46B DNA MER2_type 1 236 0 575 260 109 70 chr2 69627716 69627863 -181059991 + L1MEd LINE L1 474 641 -5478 329 242 21 21 chr2 69627869 69627964 -181059890 - HsTC2 DNA Tc2 -1797 101 7 24 32 0 0 chr2 69627998 69628029 -181059825 + AT_rich Low_complexity Low_complexity 1 31 0 976 115 15 0 chr2 69628107 69628237 -181059617 + FLAM_C SINE Alu 1 132 -11 854 306 86 21 chr2 69628402 69628875 -181058979 - MLT1K LTR MaLR -35 553 22 330 295 34 23 chr2 69629373 69629529 -181058325 + MIR SINE MIR 32 183 -66 540 0 0 0 chr2 69629813 69629873 -181057981 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 1714 57 24 5 chr2 69630403 69630615 -181057239 - AluY SINE Alu -9 302 87 1706 76 18 0 chr2 69631947 69632172 -181055682 + L1PA10 LINE L1 5939 6167 -1 359 279 50 36 chr2 69632320 69632460 -181055394 + MER5B DNA MER1_type 36 177 -1 248 286 10 20 chr2 69632532 69632630 -181055224 - L2 LINE L2 -222 3091 2995 23 0 0 0 chr2 69634684 69634707 -181053147 + AT_rich Low_complexity Low_complexity 1 23 0 2251 137 70 28 chr2 69634740 69635245 -181052609 + MLT2A2 LTR ERVL 1 552 -2 767 171 165 18 chr2 69635245 69635415 -181052439 - AluJo SINE Alu -78 234 40 274 305 201 13 chr2 69635994 69636148 -181051706 - MIR3 SINE MIR -10 198 16 22 94 0 0 chr2 69636271 69636335 -181051519 + AT_rich Low_complexity Low_complexity 1 64 0 233 309 24 0 chr2 69636767 69636851 -181051003 - MIR3 SINE MIR -25 183 98 6199 85 25 2 chr2 69689107 69690025 -180997829 + L1MA2 LINE L1 5366 6304 0 445 288 48 22 chr2 69690088 69690529 -180997325 + L1ME LINE L1 1117 1611 -4699 584 266 22 9 chr2 69690893 69691122 -180996732 + L1ME LINE L1 2243 2474 -3655 518 294 129 40 chr2 69691162 69691512 -180996342 + L1ME LINE L1 3078 3458 -2671 592 307 55 21 chr2 69692350 69692862 -180994992 + L1ME LINE L1 3774 4302 -1827 228 237 34 0 chr2 69692885 69692944 -180994910 + (TA)n Simple_repeat Simple_repeat 1 61 0 505 274 67 23 chr2 69693195 69693538 -180994316 + L1ME LINE L1 4341 4698 -1431 314 322 66 0 chr2 69693561 69693744 -180994110 + L1ME LINE L1 4774 4968 -1161 848 269 12 27 chr2 69694033 69694284 -180993570 + MIR SINE MIR 17 262 0 873 314 53 26 chr2 69694292 69694322 -180993532 + L1ME LINE L1 5241 5269 -884 2468 67 0 0 chr2 69694322 69694620 -180993234 + AluY SINE Alu 1 298 -13 873 314 53 26 chr2 69694620 69695120 -180992734 + L1ME LINE L1 5269 5785 -368 1620 192 7 4 chr2 69695209 69695490 -180992364 + AluJb SINE Alu 1 282 -30 243 0 0 0 chr2 69695493 69695520 -180992334 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 482 31 16 0 chr2 69699315 69699379 -180988475 + (GA)n Simple_repeat Simple_repeat 2 66 0 240 314 123 48 chr2 69699517 69699826 -180988028 - L3 LINE CR1 -357 1220 889 875 162 66 35 chr2 69699868 69700066 -180987788 - L1PB4 LINE L1 0 6156 5953 2149 147 0 0 chr2 69700263 69700562 -180987292 + AluSx SINE Alu 1 299 -13 464 318 119 28 chr2 69700574 69701037 -180986817 - L1ME4a LINE L1 -54 6067 5563 224 254 183 0 chr2 69701232 69701303 -180986551 + L2 LINE L2 3229 3312 -1 467 200 30 30 chr2 69701944 69702044 -180985810 - MIR SINE MIR -18 244 145 544 276 189 33 chr2 69702050 69702500 -180985354 - LTR33 LTR ERVL 0 521 2 2640 285 178 22 chr2 69702515 69703995 -180983859 + L2 LINE L2 620 2331 -983 797 274 59 25 chr2 69703995 69704316 -180983538 + MLT1J2 LTR MaLR 1 332 -118 527 256 37 24 chr2 69704319 69704483 -180983371 + MLT1J2 LTR MaLR 285 450 0 250 261 31 0 chr2 69704590 69704655 -180983199 + L2 LINE L2 3198 3264 -8 1416 315 84 8 chr2 69704666 69705436 -180982418 + L2 LINE L2 2460 3291 -22 21 57 0 0 chr2 69705560 69705595 -180982259 + AT_rich Low_complexity Low_complexity 1 35 0 270 278 24 8 chr2 69705595 69705721 -180982133 - L1ME4a LINE L1 -12 6109 5982 245 125 0 21 chr2 69705731 69705779 -180982075 + (TTCC)n Simple_repeat Simple_repeat 2 48 0 2221 196 61 29 chr2 69706691 69707180 -180980674 + MLT1D LTR MaLR 1 505 0 383 260 32 8 chr2 69707224 69707347 -180980507 + MER117 DNA MER1_type 30 155 -42 183 80 0 0 chr2 69708417 69708442 -180979412 + (CAAAG)n Simple_repeat Simple_repeat 2 26 0 331 412 7 0 chr2 69708619 69708767 -180979087 - MIR3 SINE MIR -27 181 33 404 183 118 11 chr2 69708846 69708939 -180978915 + L2 LINE L2 3170 3272 0 1093 167 100 58 chr2 69709143 69709454 -180978400 + MER33 DNA MER1_type 1 324 0 530 354 41 64 chr2 69709989 69710379 -180977475 + L2 LINE L2 2837 3217 -55 180 0 0 0 chr2 69711133 69711153 -180976701 + (T)n Simple_repeat Simple_repeat 1 20 0 205 162 0 0 chr2 69712328 69712365 -180975489 + GA-rich Low_complexity Low_complexity 1 37 0 232 277 15 0 chr2 69712545 69712610 -180975244 + CT-rich Low_complexity Low_complexity 2 67 0 337 313 87 39 chr2 69715530 69715738 -180972116 + MIR SINE MIR 45 262 0 376 231 149 51 chr2 69715791 69715986 -180971868 + L2 LINE L2 3091 3304 -9 1435 145 45 3 chr2 69716336 69716626 -180971228 + MER33 DNA MER1_type 1 302 -22 273 310 39 54 chr2 69716678 69716807 -180971047 + MIR3 SINE MIR 15 141 -67 270 235 165 59 chr2 69717930 69718100 -180969754 + MIR SINE MIR 2 189 -73 187 284 167 10 chr2 69718509 69718611 -180969243 - L2 LINE L2 -16 3297 3180 490 240 8 8 chr2 69718834 69718959 -180968895 - MER5A DNA MER1_type -56 133 9 639 121 0 0 chr2 69720051 69720150 -180967704 + (GA)n Simple_repeat Simple_repeat 2 100 0 257 270 160 10 chr2 69722117 69722217 -180965637 + L2 LINE L2 3155 3269 -3 652 264 65 86 chr2 69723402 69723846 -180964008 - MLT1J LTR MaLR 0 446 1 2128 107 13 10 chr2 69724512 69724811 -180963043 + AluSx SINE Alu 1 300 -12 659 300 50 19 chr2 69725109 69725216 -180962638 + L2 LINE L2 3008 3110 -203 1941 132 33 15 chr2 69725216 69725549 -180962305 - L1MA8 LINE L1 0 6291 5953 659 300 50 19 chr2 69725549 69725701 -180962153 + L2 LINE L2 3110 3275 -38 249 57 0 0 chr2 69725770 69725805 -180962049 + (CA)n Simple_repeat Simple_repeat 1 35 0 2839 16 0 0 chr2 69725813 69726123 -180961731 - AluYa5 SINE Alu -1 310 1 276 171 118 34 chr2 69726864 69726955 -180960899 - MLT1J2 LTR MaLR 0 589 363 431 291 137 17 chr2 69727111 69727345 -180960509 - MLT1H LTR MaLR -287 262 1 198 0 0 0 chr2 69728067 69728089 -180959765 + (T)n Simple_repeat Simple_repeat 1 22 0 232 139 0 23 chr2 69728947 69728990 -180958864 - LTR51 LTR ERV1 -302 369 328 791 250 114 0 chr2 69729038 69729258 -180958596 - MIR SINE MIR -8 254 10 231 234 0 0 chr2 69730098 69730175 -180957679 + C-rich Low_complexity Low_complexity 5 81 0 344 241 13 0 chr2 69731339 69731418 -180956436 + MER116 DNA Mariner 1 80 0 215 333 0 0 chr2 69731452 69731527 -180956327 + MIR SINE MIR 184 258 -4 268 254 30 52 chr2 69732611 69732745 -180955109 - L2 LINE L2 -381 2933 2803 429 243 27 9 chr2 69732838 69732949 -180954905 + MIR SINE MIR 137 249 -13 22 0 0 0 chr2 69732952 69732974 -180954880 + AT_rich Low_complexity Low_complexity 1 22 0 727 298 54 27 chr2 69732977 69733346 -180954508 - L2 LINE L2 -556 2758 2380 225 281 125 8 chr2 69733485 69733613 -180954241 - MIR SINE MIR -71 191 49 2263 93 21 0 chr2 69733806 69734096 -180953758 - AluSx SINE Alu -16 296 1 2077 130 10 0 chr2 69734102 69734401 -180953453 - AluSx SINE Alu -10 302 1 3282 169 59 9 chr2 69734817 69735392 -180952462 + MER6A DNA MER2_type 2 605 0 724 274 60 53 chr2 69735529 69735795 -180952059 - MLT1K LTR MaLR -41 547 280 311 295 128 20 chr2 69735908 69736057 -180951797 - L2 LINE L2 -645 2669 2505 * 444 320 86 79 chr2 69736050 69736444 -180951410 - L2 LINE L2 -4 3268 2872 285 252 10 37 chr2 69736804 69736930 -180950924 - MLT1L LTR MaLR -1 614 463 1850 42 0 5 chr2 69737645 69737861 -180949993 + L1PA5 LINE L1 5938 6152 -2 685 246 39 39 chr2 69738134 69738341 -180949513 + MIR SINE MIR 47 253 -9 21 0 0 0 chr2 69740243 69740264 -180947590 + AT_rich Low_complexity Low_complexity 1 21 0 898 282 73 31 chr2 69740541 69740963 -180946891 - L2 LINE L2 0 3313 2874 284 167 0 19 chr2 69741274 69741328 -180946526 + MLT1F1 LTR MaLR 67 119 -448 1459 177 98 32 chr2 69741328 69741672 -180946182 + L1MD3 LINE L1 7407 7780 -215 1625 172 27 24 chr2 69741672 69741968 -180945886 + AluJb SINE Alu 1 297 -15 1459 177 98 32 chr2 69741968 69742001 -180945853 + L1MD3 LINE L1 7780 7809 -186 1981 150 0 10 chr2 69742045 69742345 -180945509 - AluJb SINE Alu -15 297 1 1976 154 0 0 chr2 69743021 69743319 -180944535 - AluJo SINE Alu -14 298 1 379 291 121 0 chr2 69743940 69744081 -180943773 + MIR SINE MIR 28 185 -77 1017 196 32 46 chr2 69744097 69744316 -180943538 - MER20 DNA MER1_type -3 216 1 372 305 43 37 chr2 69745066 69745253 -180942601 - MIR3 SINE MIR -5 203 16 430 185 185 0 chr2 69745353 69745472 -180942382 - L1MB3 LINE L1 -149 6034 5894 578 188 243 7 chr2 69746677 69746821 -180941033 - MER5B DNA MER1_type 0 178 1 767 278 5 5 chr2 69746914 69747108 -180940746 - MIR SINE MIR -6 256 63 21 0 0 0 chr2 69750003 69750024 -180937830 + AT_rich Low_complexity Low_complexity 1 21 0 339 279 12 37 chr2 69751870 69752031 -180935823 + CT-rich Low_complexity Low_complexity 4 160 0 214 305 0 0 chr2 69752424 69752483 -180935371 + (CA)n Simple_repeat Simple_repeat 2 60 0 376 221 53 0 chr2 69752493 69752588 -180935266 + MER94 DNA DNA 35 134 0 418 327 53 43 chr2 69752656 69752864 -180934990 + LTR67 LTR ERVL 9 218 -339 739 191 0 8 chr2 69754439 69754565 -180933289 + FLAM_C SINE Alu 2 126 -17 751 276 4 48 chr2 69754570 69754798 -180933056 - MIR SINE MIR -39 223 6 351 0 0 0 chr2 69755283 69755322 -180932532 + (TG)n Simple_repeat Simple_repeat 1 39 0 769 305 127 23 chr2 69756293 69756772 -180931082 + Tigger8 DNA MER2_type 41 569 -97 183 327 0 0 chr2 69757149 69757204 -180930650 - L2 LINE L2 -223 3049 2995 2346 88 3 0 chr2 69757290 69757584 -180930270 + AluSq SINE Alu 1 295 -18 540 272 79 40 chr2 69759586 69759814 -180928040 - MIR SINE MIR -6 256 20 1376 128 5 0 chr2 69760423 69760619 -180927235 - L1PA16 LINE L1 -2 6164 5968 770 271 76 38 chr2 69761365 69761656 -180926198 - L2 LINE L2 0 3313 3012 295 273 57 0 chr2 69761734 69761822 -180926032 - MIR SINE MIR -72 190 98 285 326 74 15 chr2 69762751 69762886 -180924968 - MER117 DNA MER1_type -50 147 5 319 390 42 26 chr2 69764111 69764301 -180923553 - L2 LINE L2 0 3272 3080 1010 318 113 11 chr2 69764675 69765137 -180922717 + L2 LINE L2 820 1328 -1986 635 326 56 4 chr2 69765293 69765526 -180922328 - L2 LINE L2 -245 3068 2824 441 264 13 26 chr2 69766974 69767129 -180920725 + MER103 DNA DNA 10 162 -4 612 73 18 9 chr2 69767341 69767450 -180920404 + (TCTA)n Simple_repeat Simple_repeat 2 111 0 271 260 20 80 chr2 69767485 69767585 -180920269 + MLT1G LTR MaLR 91 184 -406 2537 78 0 0 chr2 69767592 69767901 -180919953 - AluY SINE Alu -2 309 1 771 219 174 42 chr2 69767968 69768280 -180919574 + MLT1G LTR MaLR 154 572 -18 310 336 184 14 chr2 69769284 69769561 -180918293 + L3 LINE CR1 1142 1465 -112 373 274 18 0 chr2 69769653 69769766 -180918088 - LTR33A LTR ERVL -4 519 405 366 223 62 54 chr2 69770049 69770179 -180917675 - LTR50 LTR ERVL -645 150 20 643 365 24 88 chr2 69770211 69770596 -180917258 + L2 LINE L2 2575 2983 -289 3052 101 34 2 chr2 69770596 69771010 -180916844 + MSTA LTR MaLR 2 428 0 643 365 24 88 chr2 69771010 69771209 -180916645 + L2 LINE L2 2983 3112 -160 1975 124 25 0 chr2 69771209 69771510 -180916344 - AluSx SINE Alu 0 308 1 643 365 24 88 chr2 69771510 69771645 -180916209 + L2 LINE L2 3112 3254 -18 2188 215 94 16 chr2 69773386 69773897 -180913957 - MLT1F1 LTR MaLR -13 554 4 32287 112 14 52 chr2 69774261 69776755 -180911099 + L1PA7 LINE L1 8 2595 -3874 2238 82 7 17 chr2 69776755 69777047 -180910807 + AluY SINE Alu 1 289 -22 32287 112 14 52 chr2 69777047 69780970 -180906884 + L1PA7 LINE L1 2595 6467 -2 776 293 66 45 chr2 69781151 69781547 -180906307 + L2 LINE L2 2910 3313 0 542 281 10 45 chr2 69782399 69782598 -180905256 + LTR33 LTR ERVL 21 212 -309 544 298 13 0 chr2 69782638 69782796 -180905058 + LTR33 LTR ERVL 308 467 -54 1377 207 31 90 chr2 69782835 69783070 -180904784 + L1M2 LINE L1 1367 1568 -5281 2236 97 7 0 chr2 69783070 69783368 -180904486 - AluY SINE Alu -11 300 1 1377 207 31 90 chr2 69783368 69783553 -180904301 + L1M2 LINE L1 1568 1762 -5087 1591 216 15 18 chr2 69784080 69784341 -180903513 - L1MD3 LINE L1 -5 7990 7729 1953 213 37 3 chr2 69784341 69784694 -180903160 - MLT1A1 LTR MaLR 0 365 1 1591 216 15 18 chr2 69784694 69784765 -180903089 - L1MD3 LINE L1 -266 7729 7659 215 264 23 58 chr2 69786059 69786146 -180901708 - L2 LINE L2 -633 2681 2598 246 360 23 12 chr2 69786234 69786320 -180901534 + MIR SINE MIR 58 144 -64 1045 280 134 20 chr2 69786340 69786794 -180901060 + LTR33A LTR ERVL 1 506 -17 2045 139 3 3 chr2 69787523 69787832 -180900022 - AluSx SINE Alu -3 309 1 6532 260 102 17 chr2 69787848 69788692 -180899162 + L1MEc LINE L1 1576 2347 -4240 1759 184 0 7 chr2 69788692 69789001 -180898853 + AluJo SINE Alu 1 307 -5 6532 260 102 17 chr2 69789001 69792084 -180895770 + L1MEc LINE L1 2347 5844 -743 30 83 0 0 chr2 69792843 69792915 -180894939 + AT_rich Low_complexity Low_complexity 1 72 0 1182 260 33 15 chr2 69793252 69793583 -180894271 - MLT1J LTR MaLR -174 337 1 918 192 0 0 chr2 69794398 69794554 -180893300 - FRAM SINE Alu -22 154 1 1560 214 25 3 chr2 69796601 69796923 -180890931 - MER63 DNA MER1_type -1 1059 731 897 240 51 0 chr2 69797459 69797676 -180890178 - MIR SINE MIR -14 248 21 234 111 71 20 chr2 69800326 69800425 -180887429 + (TA)n Simple_repeat Simple_repeat 1 104 0 186 43 0 0 chr2 69800426 69800449 -180887405 + (TG)n Simple_repeat Simple_repeat 2 24 0 2419 74 3 0 chr2 69800473 69800770 -180887084 + AluSp SINE Alu 2 299 -14 282 227 80 0 chr2 69801266 69801354 -180886500 + MLT1L LTR MaLR 499 593 -22 813 188 58 0 chr2 69801497 69801658 -180886196 + MER58A DNA MER1_type 2 172 0 222 284 156 18 chr2 69803324 69803433 -180884421 - MIR SINE MIR -69 139 16 221 290 14 0 chr2 69804974 69805043 -180882811 - L2 LINE L2 -5 3267 3198 180 327 118 45 chr2 69805316 69805426 -180882428 + L2 LINE L2 3139 3256 -16 667 309 128 13 chr2 69806232 69806530 -180881324 + MLT1K LTR MaLR 4 335 -253 259 319 165 0 chr2 69806781 69806872 -180880982 + MIR SINE MIR 35 140 -122 460 270 24 8 chr2 69806898 69807024 -180880830 - LTR67 LTR ERVL 0 557 430 1531 195 34 17 chr2 69807218 69807510 -180880344 - AluJb SINE Alu -15 297 1 275 286 14 0 chr2 69808038 69808108 -180879746 + L2 LINE L2 3240 3310 -3 21 0 0 0 chr2 69808738 69808759 -180879095 + AT_rich Low_complexity Low_complexity 1 21 0 44674 41 1 1 chr2 69808759 69814914 -180872940 - L1PA3 LINE L1 0 6155 1 277 198 23 23 chr2 69814998 69815084 -180872770 + (CATG)n Simple_repeat Simple_repeat 1 86 0 200 261 0 0 chr2 69815507 69815553 -180872301 + L2 LINE L2 3247 3292 -21 191 170 226 0 chr2 69816300 69816353 -180871501 + MIR3 SINE MIR 103 167 -41 256 221 158 11 chr2 69818496 69818591 -180869263 - MIR SINE MIR 0 262 154 251 380 18 9 chr2 69818990 69819103 -180868751 - MIR SINE MIR -118 144 31 1712 161 99 3 chr2 69822018 69822341 -180865513 + MER46B DNA MER2_type 1 229 -7 2324 113 0 0 chr2 69823400 69823709 -180864145 + AluY SINE Alu 1 309 -2 215 295 0 32 chr2 69825178 69825273 -180862581 + MIR SINE MIR 125 216 -46 1079 266 115 23 chr2 69825542 69825933 -180861921 + MLT1J2 LTR MaLR 3 429 -21 38 39 0 0 chr2 69827443 69827495 -180860359 + AT_rich Low_complexity Low_complexity 1 52 0 2492 226 87 48 chr2 69827691 69828696 -180859158 - LTR27 LTR ERV1 0 1755 3 202 322 56 11 chr2 69829895 69829985 -180857869 - MIR SINE MIR -112 150 57 1304 87 43 5 chr2 69830982 69831166 -180856688 + MER30 DNA MER1_type 1 191 -39 180 246 92 15 chr2 69831545 69831610 -180856244 + L2 LINE L2 3117 3186 -86 282 227 136 40 chr2 69831878 69832076 -180855778 + L2 LINE L2 2215 2431 -883 280 243 140 65 chr2 69832192 69832299 -180855555 - L2 LINE L2 0 3272 3158 196 324 27 36 chr2 69832395 69832506 -180855348 + L2 LINE L2 2828 2937 -335 259 309 29 0 chr2 69833373 69833441 -180854413 + L2 LINE L2 3177 3246 -26 197 33 33 0 chr2 69833441 69833471 -180854383 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 249 316 26 9 chr2 69833540 69833654 -180854200 + MER117 DNA MER1_type 2 117 -80 2911 6 0 6 chr2 69833663 69833981 -180853873 + AluYb8 SINE Alu 1 316 -2 374 251 78 46 chr2 69835286 69835446 -180852408 + MIR SINE MIR 36 194 -65 534 306 62 31 chr2 69836873 69837108 -180850746 + L1M4 LINE L1 2842 3092 -3054 2039 127 0 11 chr2 69837108 69837416 -180850438 + AluSx SINE Alu 1 305 0 534 306 62 31 chr2 69837416 69837499 -180850355 + L1M4 LINE L1 3092 3171 -2975 5619 338 65 29 chr2 69837525 69841022 -180846832 - ERVL LTR ERVL -381 5383 1758 414 335 6 36 chr2 69841088 69841214 -180846640 - ERVL LTR ERVL -3420 1576 1455 2066 178 8 24 chr2 69841214 69841585 -180846269 + MLT1A1 LTR MaLR 1 365 0 414 335 6 36 chr2 69841585 69841625 -180846229 - ERVL LTR ERVL -3541 1455 1415 1523 290 28 25 chr2 69841706 69842216 -180845638 - ERVL LTR ERVL -3708 1288 778 1875 312 21 19 chr2 69842324 69842955 -180844899 - ERVL LTR ERVL -4363 633 2 956 359 70 14 chr2 69842956 69843382 -180844472 - LTR16A LTR ERVL 0 450 1 2486 84 3 0 chr2 69843574 69843885 -180843969 + AluSp SINE Alu 1 312 -1 869 303 104 41 chr2 69844354 69845110 -180842744 + L1ME4a LINE L1 5269 6072 -49 248 122 24 0 chr2 69845127 69845168 -180842686 - MER41A LTR ERV1 -113 441 400 223 316 143 30 chr2 69845930 69846063 -180841791 + L3 LINE CR1 166 313 -1264 2309 101 7 0 chr2 69846084 69846381 -180841473 + AluSc SINE Alu 1 299 -10 180 353 0 44 chr2 69846921 69846989 -180840865 - L2 LINE L2 -5 3267 3203 715 252 117 65 chr2 69846990 69847315 -180840539 - L2 LINE L2 -2 3311 2970 329 328 45 62 chr2 69847306 69847629 -180840225 - L2 LINE L2 -233 3039 2715 * 44816 40 1 2 chr2 69847632 69853785 -180834069 - L1PA4 LINE L1 -4 6151 3 251 161 18 0 chr2 69855368 69855424 -180832430 + GA-rich Low_complexity Low_complexity 1 57 0 21 36 0 0 chr2 69855462 69855490 -180832364 + AT_rich Low_complexity Low_complexity 1 28 0 671 237 46 6 chr2 69856685 69856858 -180830996 - MER104 DNA MER2_type 0 180 1 2340 96 7 0 chr2 69857402 69857703 -180830151 + AluSq SINE Alu 1 303 -10 445 280 70 6 chr2 69857934 69858091 -180829763 - MER117 DNA MER1_type -30 167 1 273 328 101 26 chr2 69858357 69858546 -180829308 + L3b LINE CR1 1113 1315 -268 386 213 37 146 chr2 69858809 69858973 -180828881 - MIR SINE MIR -111 151 6 263 290 28 102 chr2 69860090 69860166 -180827688 + MER5A DNA MER1_type 2 82 -107 1596 146 0 16 chr2 69860166 69860457 -180827397 + AluSx SINE Alu 43 329 0 263 290 28 102 chr2 69860457 69860555 -180827299 + MER5A DNA MER1_type 82 164 -25 1788 117 0 23 chr2 69861111 69861368 -180826486 - AluSg SINE Alu -6 304 54 23 0 0 0 chr2 69861662 69861685 -180826169 + AT_rich Low_complexity Low_complexity 1 23 0 420 185 87 11 chr2 69861882 69861974 -180825880 - MIR SINE MIR -86 122 24 1832 120 102 0 chr2 69862437 69862721 -180825133 + AluSq SINE Alu 1 313 0 1888 150 197 11 chr2 69862769 69863130 -180824724 - MSTA LTR MaLR 0 428 1 315 0 0 0 chr2 69864338 69864373 -180823481 + (TG)n Simple_repeat Simple_repeat 2 36 0 395 241 340 25 chr2 69864966 69865128 -180822726 + MIR SINE MIR 29 241 -21 810 279 72 35 chr2 69865939 69866341 -180821513 - HAL1 LINE L1 -1 2506 2090 1260 47 0 13 chr2 69866341 69866490 -180821364 - L1PA8 LINE L1 -7 6165 6019 1136 294 26 46 chr2 69866528 69866943 -180820911 - MLT1I LTR MaLR 0 409 3 1774 280 97 85 chr2 69867114 69867328 -180820526 - HAL1 LINE L1 -707 1800 1590 2635 146 57 0 chr2 69867328 69867731 -180820123 + MSTB LTR MaLR 1 426 0 1774 280 97 85 chr2 69867731 69869294 -180818560 - HAL1 LINE L1 -917 1590 1 535 349 18 23 chr2 69869504 69869722 -180818132 + MIR SINE MIR 46 262 0 977 241 9 14 chr2 69870015 69870235 -180817619 - MER58A DNA MER1_type -5 219 1 1018 236 46 116 chr2 69871153 69871581 -180816273 + L1MC5 LINE L1 6542 6925 -1036 227 56 56 0 chr2 69871581 69871617 -180816237 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1018 236 46 116 chr2 69871617 69871802 -180816052 + L1MC5 LINE L1 6925 7121 -840 385 256 34 0 chr2 69871802 69871919 -180815935 + L1MC5 LINE L1 7808 7928 -33 1768 144 206 9 chr2 69872530 69872856 -180814998 + MLT1B LTR MaLR 1 390 0 1131 148 11 11 chr2 69873293 69873475 -180814379 - MER2 DNA MER2_type 0 345 164 2572 113 6 6 chr2 69873475 69873829 -180814025 - THE1B LTR MaLR 0 364 11 1049 180 6 0 chr2 69873828 69874000 -180813854 - MER2 DNA MER2_type -171 174 2 * 347 261 17 67 chr2 69874454 69874573 -180813281 - L2 LINE L2 -15 3298 3186 26 0 0 0 chr2 69874595 69874621 -180813233 + AT_rich Low_complexity Low_complexity 1 26 0 1713 213 26 66 chr2 69874765 69875221 -180812633 + MER31B LTR ERV1 1 438 -28 252 0 0 0 chr2 69877084 69877112 -180810742 + (TG)n Simple_repeat Simple_repeat 2 29 0 485 241 9 18 chr2 69877190 69877302 -180810552 + L2 LINE L2 3202 3312 -1 188 0 0 69 chr2 69877413 69877442 -180810412 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 380 256 37 14 chr2 69877535 69877675 -180810179 + MIR SINE MIR 20 155 -65 282 221 30 30 chr2 69877741 69877872 -180809982 + (TTA)n Simple_repeat Simple_repeat 3 133 0 311 351 18 9 chr2 69877967 69878081 -180809773 + MIR SINE MIR 39 153 -109 413 331 41 28 chr2 69878229 69878374 -180809480 - L2 LINE L2 -1 3271 3125 499 368 163 15 chr2 69878881 69879964 -180807890 + L2 LINE L2 239 1482 -1832 562 316 71 75 chr2 69880073 69880539 -180807315 + L2 LINE L2 2809 3272 0 245 189 81 27 chr2 69880963 69881037 -180806817 - L1MEc LINE L1 -5060 1250 1173 396 270 81 0 chr2 69881055 69881166 -180806688 - MER58B DNA MER1_type 0 341 222 * 598 79 0 144 chr2 69881164 69881303 -180806551 + LTR9B LTR ERV1 447 565 -79 986 186 40 0 chr2 69881402 69881579 -180806275 - MER58B DNA MER1_type -155 186 3 358 278 22 59 chr2 69881582 69881852 -180806002 - L1MEc LINE L1 -5003 1116 857 1817 153 47 0 chr2 69881885 69882159 -180805695 - AluJo SINE Alu -25 287 1 270 106 0 0 chr2 69882393 69882440 -180805414 + (CA)n Simple_repeat Simple_repeat 1 47 0 805 166 12 0 chr2 69885079 69885248 -180802606 + GA-rich Low_complexity Low_complexity 2 172 0 921 184 25 0 chr2 69885603 69885766 -180802088 + MER5A DNA MER1_type 23 189 0 180 237 0 0 chr2 69886944 69886982 -180800872 - MIR3 SINE MIR -45 163 126 2597 177 92 23 chr2 69887090 69887571 -180800283 - MLT2B2 LTR ERVL 0 515 2 322 271 101 16 chr2 69887598 69887727 -180800127 - MIR SINE MIR -73 189 50 305 156 0 16 chr2 69888532 69888596 -180799258 + CT-rich Low_complexity Low_complexity 4 66 0 450 325 113 22 chr2 69890306 69890617 -180797237 - MER102b DNA MER1_type -1 340 2 719 301 94 62 chr2 69890930 69891378 -180796476 - L2 LINE L2 0 3313 2852 374 202 47 98 chr2 69891494 69891639 -180796215 + L1ME1 LINE L1 5757 5874 -296 1891 118 28 65 chr2 69891639 69891960 -180795894 + AluSx SINE Alu 1 309 -3 374 202 47 98 chr2 69891960 69892027 -180795827 + L1ME1 LINE L1 5874 5943 -227 834 124 5 38 chr2 69892238 69892424 -180795430 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 578 170 46 0 chr2 69892427 69892580 -180795274 + CT-rich Low_complexity Low_complexity 3 162 0 186 103 0 0 chr2 69893926 69893955 -180793899 + (CAAT)n Simple_repeat Simple_repeat 1 29 0 2295 170 46 50 chr2 69894145 69894604 -180793250 - MSTB2 LTR MaLR 0 457 1 243 336 29 19 chr2 69895000 69895104 -180792750 + MER5B DNA MER1_type 46 150 -28 356 260 27 20 chr2 69896285 69896422 -180791432 - MLT1J LTR MaLR -2 509 406 751 205 42 6 chr2 69896785 69896951 -180790903 + MER5B DNA MER1_type 7 178 0 188 219 0 24 chr2 69896974 69897015 -180790839 - MER5A DNA MER1_type -124 65 26 243 0 0 0 chr2 69897055 69897082 -180790772 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 304 302 22 59 chr2 69897208 69897409 -180790445 - MIR SINE MIR -50 212 16 554 297 83 26 chr2 69897508 69897737 -180790117 - MIR SINE MIR -4 258 17 616 311 33 11 chr2 69897738 69897918 -180789936 + MER91A DNA MER1_type 1 184 -12 321 284 14 0 chr2 69898491 69898565 -180789289 + L2 LINE L2 3235 3309 -4 1019 313 62 48 chr2 69898745 69899569 -180788285 + L1MEd LINE L1 16 850 -5269 912 279 17 8 chr2 69899941 69900178 -180787676 + MIR SINE MIR 3 241 -21 227 316 66 0 chr2 69900316 69900392 -180787462 - MIR3 SINE MIR -25 183 103 348 64 0 0 chr2 69903861 69903908 -180783946 + (TG)n Simple_repeat Simple_repeat 2 48 0 293 259 175 30 chr2 69904462 69904628 -180783226 + MER20B DNA MER1_type 3 192 -591 1235 220 158 36 chr2 69904835 69905285 -180782569 - MLT1D LTR MaLR 0 505 1 382 359 52 4 chr2 69905372 69905603 -180782251 - L2 LINE L2 -676 2638 2397 322 263 105 0 chr2 69906125 69906220 -180781634 + MIR SINE MIR 27 131 -77 633 250 138 0 chr2 69907445 69907605 -180780249 + MER5A DNA MER1_type 5 186 -3 1371 119 95 0 chr2 69907616 69907826 -180780028 - MER30 DNA MER1_type 0 230 1 423 294 94 25 chr2 69910112 69910313 -180777541 - MIR SINE MIR 0 262 48 369 178 55 0 chr2 69910565 69910638 -180777216 + MIR SINE MIR 183 259 -3 350 353 16 0 chr2 69910771 69910893 -180776961 + L2 LINE L2 3190 3313 0 233 288 76 0 chr2 69911954 69912020 -180775834 - MIR SINE MIR -179 83 13 206 118 0 0 chr2 69912140 69912174 -180775680 + (A)n Simple_repeat Simple_repeat 1 34 0 426 280 53 33 chr2 69912959 69913109 -180774745 + MIR SINE MIR 66 218 -44 2255 156 83 5 chr2 69913141 69913538 -180774316 + MSTA LTR MaLR 1 428 0 685 168 48 0 chr2 69913610 69913735 -180774119 - MLT1C LTR MaLR 0 467 337 638 220 0 0 chr2 69913778 69913887 -180773967 - MLT1C LTR MaLR -138 329 221 22 0 0 0 chr2 69913909 69913931 -180773923 + AT_rich Low_complexity Low_complexity 1 22 0 1071 60 8 0 chr2 69913935 69914068 -180773786 - L1PB1 LINE L1 0 6151 6018 1014 18 0 0 chr2 69914088 69914201 -180773653 - AluYb8 SINE Alu -205 113 1 5250 139 21 12 chr2 69914201 69915531 -180772323 - L1PB1 LINE L1 -118 6033 4694 1079 175 52 22 chr2 69915531 69915760 -180772094 - MLT1C LTR MaLR -231 236 1 340 255 38 19 chr2 69916218 69916324 -180771530 - MIR SINE MIR -59 203 96 188 83 0 28 chr2 69918375 69918411 -180769443 + (TTAAA)n Simple_repeat Simple_repeat 1 35 0 288 219 0 16 chr2 69918425 69918489 -180769365 - MER3 DNA MER1_type -146 63 1 833 222 34 6 chr2 69918766 69918942 -180768912 - MER58A DNA MER1_type 0 224 44 31 26 0 0 chr2 69919272 69919310 -180768544 + AT_rich Low_complexity Low_complexity 1 38 0 1763 153 0 24 chr2 69919317 69919605 -180768249 - AluSx SINE Alu -31 281 1 21 0 0 0 chr2 69919936 69919957 -180767897 + AT_rich Low_complexity Low_complexity 1 21 0 1871 167 0 7 chr2 69920110 69920409 -180767445 + AluJb SINE Alu 2 298 -14 441 95 0 0 chr2 69920421 69920484 -180767370 + (TG)n Simple_repeat Simple_repeat 2 64 0 3805 71 4 0 chr2 69920521 69920983 -180766871 - L1PA7 LINE L1 0 6154 5691 1135 194 12 147 chr2 69920983 69921323 -180766531 + MER21B LTR ERV1 42 335 -528 1279 212 93 25 chr2 69921348 69921669 -180766185 + MER2 DNA MER2_type 2 344 -1 1710 217 93 21 chr2 69921675 69922094 -180765760 + MER21B LTR ERV1 363 811 -52 1835 148 100 28 chr2 69924109 69924523 -180763331 - MLT2D LTR ERVL 0 554 1 264 167 0 0 chr2 69924652 69924700 -180763154 + (CA)n Simple_repeat Simple_repeat 2 49 0 1891 166 7 3 chr2 69925197 69925505 -180762349 + AluJb SINE Alu 1 309 -3 206 227 13 80 chr2 69925784 69925859 -180761995 + MIR3 SINE MIR 133 202 -6 2205 124 0 9 chr2 69926008 69926323 -180761531 + AluSx SINE Alu 1 312 0 1011 144 32 27 chr2 69926371 69926559 -180761295 + MER53 DNA DNA 1 189 0 270 305 29 0 chr2 69926862 69926967 -180760887 - MER102b DNA MER1_type -1 340 233 232 318 0 0 chr2 69926987 69927050 -180760804 - MER102b DNA MER1_type -278 63 1 454 202 115 0 chr2 69927179 69927283 -180760571 + L2 LINE L2 3198 3313 0 271 304 0 0 chr2 69927445 69927514 -180760340 + MER102b DNA MER1_type 11 79 -262 795 269 8 51 chr2 69927670 69927923 -180759931 + MIR SINE MIR 18 259 -3 1745 206 22 38 chr2 69928082 69928451 -180759403 - MLT1A1 LTR MaLR -2 363 1 386 261 0 11 chr2 69928470 69928558 -180759296 + L2 LINE L2 3227 3313 0 1834 221 54 67 chr2 69928728 69929267 -180758587 + MLT1F LTR MaLR 11 542 0 1552 195 7 17 chr2 69929589 69929887 -180757967 + AluJo SINE Alu 1 295 -17 405 300 184 11 chr2 69930080 69930347 -180757507 + L3 LINE CR1 1051 1363 -214 334 338 45 40 chr2 69930498 69930696 -180757158 + MIR SINE MIR 20 218 -44 1336 159 0 76 chr2 69930709 69930985 -180756869 + MLT1B LTR MaLR 136 390 0 2943 272 134 30 chr2 69931325 69931816 -180756038 - HAL1 LINE L1 -1048 1459 1020 321 100 0 0 chr2 69931816 69931866 -180755988 + (TG)n Simple_repeat Simple_repeat 2 51 0 2943 272 134 30 chr2 69931866 69932682 -180755172 - HAL1 LINE L1 -1487 1020 16 417 20 0 0 chr2 69932894 69932944 -180754910 + (CA)n Simple_repeat Simple_repeat 2 51 0 212 315 101 27 chr2 69933083 69933232 -180754622 + MIR SINE MIR 49 208 -54 204 300 0 43 chr2 69933388 69933458 -180754396 + L2 LINE L2 3246 3312 -1 321 214 258 11 chr2 69934404 69934493 -180753361 - MER5A DNA MER1_type 0 189 79 1062 139 13 0 chr2 69934500 69934651 -180753203 - FRAM SINE Alu -19 157 5 239 283 17 0 chr2 69934660 69934720 -180753134 - MER5A DNA MER1_type -115 74 14 1837 155 17 3 chr2 69934733 69935023 -180752831 - AluJb SINE Alu -15 297 4 448 227 281 0 chr2 69935371 69935499 -180752355 - MER5B DNA MER1_type -14 164 1 491 314 37 0 chr2 69935746 69935934 -180751920 + HsTC2 DNA Tc2 717 911 -987 27 62 0 0 chr2 69936708 69936756 -180751098 + AT_rich Low_complexity Low_complexity 1 48 0 2854 117 30 37 chr2 69938092 69938187 -180749667 - Tigger2a DNA MER2_type -2274 434 340 2582 137 80 2 chr2 69938187 69938588 -180749266 - MSTB1 LTR MaLR 0 432 1 2854 117 30 37 chr2 69938588 69938929 -180748925 - Tigger2a DNA MER2_type -2368 340 1 245 193 0 18 chr2 69938938 69938995 -180748859 + L2 LINE L2 1618 1673 -1641 1608 308 101 28 chr2 69939031 69939904 -180747950 + L2 LINE L2 1878 2814 -500 2106 111 18 0 chr2 69939904 69940210 -180747644 - AluSq SINE Alu 0 311 1 283 226 0 0 chr2 69940304 69940366 -180747488 - L1M4c LINE L1 -3884 2500 2439 2516 216 55 28 chr2 69940717 69940892 -180746962 - L1ME1 LINE L1 -191 5958 5789 1859 154 88 23 chr2 69940892 69941235 -180746619 + MLT1A1 LTR MaLR 1 365 0 2516 216 55 28 chr2 69941235 69941675 -180746179 - L1ME1 LINE L1 -360 5789 5326 1082 221 9 44 chr2 69941677 69941768 -180746086 - L1ME1 LINE L1 -3169 2960 2867 2130 116 0 0 chr2 69941768 69942093 -180745761 - AluSx SINE Alu 0 325 1 1082 221 9 44 chr2 69942093 69942316 -180745538 - L1ME1 LINE L1 -3262 2867 2656 1964 180 66 0 chr2 69942379 69942756 -180745098 + L1MB8 LINE L1 5450 5851 -333 1139 195 4 32 chr2 69942758 69943009 -180744845 + L1MB8 LINE L1 5929 6172 -6 292 266 116 49 chr2 69943085 69943291 -180744563 - L1MC4 LINE L1 -91 7746 7501 204 67 0 0 chr2 69943291 69943321 -180744533 + (TG)n Simple_repeat Simple_repeat 1 30 0 865 290 77 29 chr2 69943385 69943827 -180744027 - L1ME1 LINE L1 -5158 961 499 445 319 49 10 chr2 69944025 69944229 -180743625 - L1ME1 LINE L1 -5902 217 6 862 264 185 26 chr2 69944238 69944654 -180743200 + L2 LINE L2 2825 3306 -7 195 162 0 0 chr2 69944817 69944854 -180743000 + (TG)n Simple_repeat Simple_repeat 2 38 0 195 189 0 0 chr2 69946445 69946482 -180741372 - MIR3 SINE MIR -20 188 152 189 189 0 54 chr2 69946457 69946494 -180741360 - L3 LINE CR1 -28 1549 1515 * 442 129 20 189 chr2 69946760 69946839 -180741015 - MSTC LTR MaLR -338 90 62 2687 51 0 0 chr2 69946839 69947150 -180740704 - AluY SINE Alu 0 311 1 442 129 20 189 chr2 69947150 69947204 -180740650 - MSTC LTR MaLR -366 62 1 249 180 0 0 chr2 69947413 69947463 -180740391 + GA-rich Low_complexity Low_complexity 2 51 0 1235 107 45 0 chr2 69949755 69949932 -180737922 - AluSq SINE Alu 0 313 129 2590 129 45 10 chr2 69950209 69950605 -180737249 - MSTC LTR MaLR -18 410 1 29 47 0 0 chr2 69950688 69950731 -180737123 + AT_rich Low_complexity Low_complexity 1 43 0 363 211 0 0 chr2 69950791 69950881 -180736973 + GA-rich Low_complexity Low_complexity 2 91 0 22 0 0 0 chr2 69952024 69952046 -180735808 + AT_rich Low_complexity Low_complexity 1 22 0 347 296 214 0 chr2 69952236 69952442 -180735412 - MIR SINE MIR -12 250 1 2205 131 0 0 chr2 69952677 69952983 -180734871 - AluSx SINE Alu -6 306 1 308 222 75 84 chr2 69952984 69953096 -180734758 - MIR3 SINE MIR -30 178 68 234 0 0 0 chr2 69954840 69954866 -180732988 + (TG)n Simple_repeat Simple_repeat 2 27 0 247 296 99 26 chr2 69957476 69957628 -180730226 - LTR16C LTR ERVL -2 489 327 1016 92 13 0 chr2 69959269 69959422 -180728432 + (TTTC)n Simple_repeat Simple_repeat 4 158 0 1965 135 0 7 chr2 69959422 69959704 -180728150 - AluSx SINE Alu -32 280 1 200 302 167 10 chr2 69960043 69960139 -180727715 - MIR SINE MIR -55 153 43 352 291 0 27 chr2 69960503 69960613 -180727241 - MIR3 SINE MIR -9 199 93 248 202 83 48 chr2 69961738 69961822 -180726032 + MIR SINE MIR 122 208 -54 207 0 0 0 chr2 69962068 69962091 -180725763 + (CAAAAA)n Simple_repeat Simple_repeat 3 25 0 2309 107 3 0 chr2 69962097 69962406 -180725448 + AluSp SINE Alu 1 310 -3 316 256 96 32 chr2 69962787 69962912 -180724942 - L2 LINE L2 -5 3308 3176 28 0 0 0 chr2 69963074 69963102 -180724752 + AT_rich Low_complexity Low_complexity 1 28 0 2154 102 0 36 chr2 69963105 69963408 -180724446 + AluSx SINE Alu 2 293 -19 314 289 11 0 chr2 69964078 69964168 -180723686 + GA-rich Low_complexity Low_complexity 2 92 0 198 305 73 0 chr2 69964615 69964697 -180723157 + MIR SINE MIR 64 151 -111 315 232 0 0 chr2 69965828 69965910 -180721944 + (TAGA)n Simple_repeat Simple_repeat 1 82 0 761 216 0 0 chr2 69965982 69966107 -180721747 - FLAM_A SINE Alu -8 125 1 1973 115 3 94 chr2 69966759 69967099 -180720755 - AluSp SINE Alu -4 309 1 2262 139 29 5 chr2 69967102 69967484 -180720370 - L1MA4 LINE L1 -17 6283 5893 349 248 83 18 chr2 69967511 69967620 -180720234 + MIR3 SINE MIR 2 117 -91 214 97 0 0 chr2 69967684 69967715 -180720139 + MER5B DNA MER1_type 19 49 -129 1192 162 0 0 chr2 69970281 69970479 -180717375 + L1PB1 LINE L1 3 200 -6663 14948 146 57 17 chr2 69970511 69975681 -180712173 + L1PB1 LINE L1 647 5609 -1258 4772 39 2 0 chr2 69975681 69976215 -180711639 + L1PA5 LINE L1 5618 6152 -2 14948 146 57 17 chr2 69976215 69976666 -180711188 + L1PB1 LINE L1 5609 6041 -826 342 0 0 0 chr2 69976666 69976704 -180711150 + (CA)n Simple_repeat Simple_repeat 2 39 0 14948 146 57 17 chr2 69976704 69977064 -180710790 + L1PB1 LINE L1 6041 6867 0 270 0 0 0 chr2 69977315 69977345 -180710509 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 389 254 121 52 chr2 69977653 69977826 -180710028 - MER5A DNA MER1_type -1 188 4 1095 172 10 26 chr2 69977837 69978029 -180709825 - MER5A DNA MER1_type 0 189 1 207 100 0 0 chr2 69978567 69978597 -180709257 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 211 233 17 50 chr2 69978606 69978666 -180709188 - L2 LINE L2 -15 3257 3200 1021 127 12 12 chr2 69979283 69979456 -180708398 + MER53 DNA DNA 5 177 -12 3466 53 14 1 chr2 69979651 69980370 -180707484 - L1P2 LINE L1 -487 5667 4941 234 0 0 0 chr2 69980499 69980525 -180707329 + (T)n Simple_repeat Simple_repeat 1 26 0 2729 171 56 34 chr2 69981108 69981612 -180706242 - MLT2B2 LTR ERVL 0 515 1 180 222 0 0 chr2 69981760 69981805 -180706049 - L2 LINE L2 0 3313 3269 2367 134 21 24 chr2 69981872 69982245 -180705609 - THE1C LTR MaLR -3 372 1 398 217 28 57 chr2 69984260 69984366 -180703488 - MIR SINE MIR -82 180 78 722 314 12 16 chr2 69984633 69984888 -180702966 - MIR SINE MIR -3 259 6 589 196 112 21 chr2 69984909 69985052 -180702802 - MER5A DNA MER1_type 0 189 34 341 322 0 35 chr2 69985087 69985230 -180702624 - MER5B DNA MER1_type -22 156 19 199 287 17 70 chr2 69985250 69985365 -180702489 + MIR SINE MIR 104 212 -50 1648 181 22 0 chr2 69985411 69985687 -180702167 + AluJo SINE Alu 11 292 -20 272 229 177 0 chr2 69985787 69985883 -180701971 + MIR SINE MIR 136 248 -14 189 107 0 0 chr2 69986240 69986268 -180701586 + (ATG)n Simple_repeat Simple_repeat 3 30 0 359 302 65 64 chr2 69986478 69986855 -180700999 - L1M4 LINE L1 -1525 4621 4235 21 82 0 0 chr2 69986863 69986912 -180700942 + AT_rich Low_complexity Low_complexity 1 49 0 35 24 0 0 chr2 69987503 69987545 -180700309 + AT_rich Low_complexity Low_complexity 1 42 0 227 149 45 104 chr2 69988335 69988402 -180699452 + MLT1J2 LTR MaLR 34 96 -354 * 777 266 165 35 chr2 69988362 69988768 -180699086 + LTR67 LTR ERVL 99 557 0 449 276 221 22 chr2 69988874 69989055 -180698799 - MIR SINE MIR -25 237 21 241 300 114 57 chr2 69989063 69989203 -180698651 - MIR SINE MIR -87 175 28 208 212 61 45 chr2 69989720 69989786 -180698068 + MIR3 SINE MIR 10 76 -132 1260 216 110 4 chr2 69990756 69991020 -180696834 + AluJo SINE Alu 2 293 -9 267 358 14 40 chr2 69991485 69991633 -180696221 - L2 LINE L2 0 3272 3129 440 239 51 8 chr2 69991664 69991781 -180696073 + L2 LINE L2 2932 3053 -219 463 317 16 44 chr2 69991909 69992092 -180695762 - LTR33 LTR ERVL -343 178 1 406 312 56 8 chr2 69992193 69992318 -180695536 - MER91A DNA MER1_type -65 131 1 2874 97 14 3 chr2 69993378 69993749 -180694105 + THE1C LTR MaLR 1 375 0 2096 116 7 3 chr2 69996507 69996799 -180691055 - AluSq SINE Alu -20 293 1 374 325 127 32 chr2 69997524 69997902 -180689952 + L2 LINE L2 2261 2674 -640 1255 266 76 3 chr2 69997919 69998288 -180689566 - LTR16A LTR ERVL 0 450 55 1995 160 3 6 chr2 69998292 69998604 -180689250 - AluJo SINE Alu -1 311 1 486 336 80 54 chr2 69998634 69999199 -180688655 + L2 LINE L2 2687 3272 0 202 368 0 11 chr2 69999200 69999287 -180688567 - MIR SINE MIR -57 151 66 408 273 55 16 chr2 70000932 70001060 -180686794 + MER94 DNA DNA 1 133 -1 8631 29 0 0 chr2 70001111 70002836 -180685018 - L1PA3 LINE L1 -2 6153 4426 5184 152 37 13 chr2 70004577 70005470 -180682384 - L1MC1 LINE L1 0 6333 5420 1664 247 44 13 chr2 70005491 70005875 -180681979 - MSTD LTR MaLR 0 396 1 315 341 0 48 chr2 70006356 70006482 -180681372 - MIR3 SINE MIR -78 130 11 301 283 65 82 chr2 70006775 70006963 -180680891 + MIR3 SINE MIR 2 191 -68 188 212 0 0 chr2 70007027 70007060 -180680794 + L2 LINE L2 3272 3304 -9 2431 166 66 13 chr2 70008297 70008766 -180679088 - L1MB3 LINE L1 -1 6182 5689 2245 103 6 16 chr2 70008779 70009091 -180678763 - AluSx SINE Alu -3 309 1 1747 205 22 25 chr2 70009202 70009568 -180678286 + MLT1A1 LTR MaLR 1 365 0 369 333 11 61 chr2 70009689 70009869 -180677985 + MER5B DNA MER1_type 7 177 -1 183 80 0 0 chr2 70011570 70011595 -180676259 + (A)n Simple_repeat Simple_repeat 1 25 0 379 153 12 12 chr2 70012971 70013056 -180674798 + CT-rich Low_complexity Low_complexity 2 86 0 189 107 0 0 chr2 70013111 70013139 -180674715 + (TG)n Simple_repeat Simple_repeat 2 29 0 506 146 11 11 chr2 70013727 70013816 -180674038 - MER53 DNA DNA -96 93 5 282 218 0 0 chr2 70014095 70014150 -180673704 + MER94 DNA DNA 64 118 -16 324 0 0 0 chr2 70015004 70015040 -180672814 + (T)n Simple_repeat Simple_repeat 1 36 0 297 0 0 0 chr2 70015737 70015770 -180672084 + (T)n Simple_repeat Simple_repeat 1 33 0 207 0 0 0 chr2 70016507 70016530 -180671324 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2317 110 0 0 chr2 70016538 70016846 -180671008 - AluSx SINE Alu -4 308 1 311 161 58 92 chr2 70016863 70016950 -180670904 + Charlie8 DNA MER1_type 75 158 -2259 243 257 14 14 chr2 70020226 70020296 -180667558 + Charlie8 DNA MER1_type 5 74 -2343 229 287 106 43 chr2 70020596 70020784 -180667070 - MIR3 SINE MIR -8 200 1 227 170 106 0 chr2 70021712 70021759 -180666095 + L2 LINE L2 3262 3313 0 432 37 0 0 chr2 70022363 70022417 -180665437 + (TG)n Simple_repeat Simple_repeat 2 55 0 200 189 0 0 chr2 70022872 70022909 -180664945 + (CATA)n Simple_repeat Simple_repeat 3 39 0 189 321 48 24 chr2 70023058 70023142 -180664712 + L3b LINE CR1 1309 1394 -189 857 220 80 15 chr2 70023608 70023808 -180664046 + MIR SINE MIR 13 225 -37 246 255 0 53 chr2 70024107 70024201 -180663653 + LTR67 LTR ERVL 459 547 -10 34154 34 16 1 chr2 70024307 70030297 -180657557 - L1PA3 LINE L1 -2 6153 13 204 40 0 0 chr2 70031603 70031628 -180656226 + (TG)n Simple_repeat Simple_repeat 2 26 0 249 306 0 0 chr2 70031672 70031734 -180656120 + MER5B DNA MER1_type 2 63 -115 1237 298 37 39 chr2 70031757 70032274 -180655580 - LTR33 LTR ERVL -5 516 1 220 295 200 9 chr2 70032330 70032435 -180655419 + MIR3 SINE MIR 34 158 -50 250 364 0 33 chr2 70032766 70032887 -180654967 - MIR SINE MIR -122 140 24 491 0 13 76 chr2 70033017 70033096 -180654758 + HERVH LTR ERV1 7640 7713 0 2867 67 2 7 chr2 70033096 70033502 -180654352 + LTR7 LTR ERV1 1 404 -46 380 244 81 16 chr2 70033859 70033982 -180653872 + LTR67 LTR ERVL 427 557 0 18045 104 14 17 chr2 70034568 70037495 -180650359 + HERVH LTR ERV1 77 2995 -4718 909 127 7 0 chr2 70037474 70037624 -180650230 + HERVH LTR ERV1 3140 3290 -4423 * 3135 112 6 4 chr2 70037623 70038116 -180649738 + HERVH LTR ERV1 3500 3993 -3720 3939 157 3 1 chr2 70038118 70038779 -180649075 + HERVH LTR ERV1 4488 5149 -2564 949 93 0 7 chr2 70038780 70038930 -180648924 + HERVH LTR ERV1 5600 5748 -1965 4175 167 16 13 chr2 70039044 70040411 -180647443 - L1P5 LINE L1 -380 5776 4395 207 0 0 0 chr2 70043261 70043284 -180644570 + (TG)n Simple_repeat Simple_repeat 2 24 0 204 286 0 18 chr2 70043415 70043471 -180644383 + GA-rich Low_complexity Low_complexity 3 57 0 545 321 71 13 chr2 70045013 70045237 -180642617 + MIR SINE MIR 1 237 -25 184 354 116 66 chr2 70047834 70048136 -180639718 - L2 LINE L2 -15 3257 2941 225 87 43 22 chr2 70048247 70048293 -180639561 + A-rich Low_complexity Low_complexity 2 48 0 1092 272 144 0 chr2 70049911 70050238 -180637616 - L3b LINE CR1 -85 1498 1125 376 167 44 22 chr2 70050290 70050379 -180637475 - Charlie1 DNA MER1_type 0 2761 2671 311 68 0 0 chr2 70050379 70050423 -180637431 - MADE1 DNA Mariner 0 80 37 792 242 36 0 chr2 70050471 70050690 -180637164 - Charlie1 DNA MER1_type -2534 227 1 921 272 45 50 chr2 70051837 70052278 -180635576 - MER115 DNA AcHobo -251 442 4 1853 179 0 7 chr2 70052757 70053065 -180634789 - AluJo SINE Alu -6 306 1 21 36 0 0 chr2 70053175 70053203 -180634651 + AT_rich Low_complexity Low_complexity 1 28 0 2742 219 37 5 chr2 70053425 70054145 -180633709 + L1MD2 LINE L1 5313 6068 -98 1757 167 0 14 chr2 70054668 70054950 -180632904 - AluJb SINE Alu -32 280 3 23 33 0 0 chr2 70055208 70055238 -180632616 + AT_rich Low_complexity Low_complexity 1 30 0 2446 71 0 23 chr2 70056881 70057190 -180630664 - AluY SINE Alu -9 302 1 28 29 0 0 chr2 70057259 70057294 -180630560 + AT_rich Low_complexity Low_complexity 1 35 0 1363 213 117 21 chr2 70058735 70059068 -180628786 + MLT1A1 LTR MaLR 1 365 0 565 239 142 7 chr2 70059197 70059352 -180628502 - MER45A DNA AcHobo 0 178 3 2303 161 39 2 chr2 70059495 70059906 -180627948 - MSTB LTR MaLR 0 426 1 390 94 0 0 chr2 70060426 70060490 -180627364 + (CA)n Simple_repeat Simple_repeat 2 65 0 1496 175 67 15 chr2 70060788 70061119 -180626735 - L1PB4 LINE L1 0 6156 5809 234 0 0 0 chr2 70061120 70061146 -180626708 + (TG)n Simple_repeat Simple_repeat 2 27 0 180 0 0 0 chr2 70061149 70061169 -180626685 + (TA)n Simple_repeat Simple_repeat 2 21 0 26328 42 37 3 chr2 70061269 70064762 -180623092 - L1P LINE L1 -2533 3613 1 270 333 18 27 chr2 70065860 70065971 -180621883 + MIR SINE MIR 21 130 -132 732 198 102 30 chr2 70066975 70067142 -180620712 + MER5A DNA MER1_type 8 186 -3 244 355 66 53 chr2 70069144 70069296 -180618558 + L2 LINE L2 3117 3270 -2 2347 103 0 0 chr2 70071118 70071419 -180616435 - AluY SINE Alu -10 301 1 402 136 0 0 chr2 70071683 70071742 -180616112 - Alu SINE Alu -17 293 235 2518 84 0 0 chr2 70072151 70072462 -180615392 + AluY SINE Alu 1 311 0 2148 253 109 33 chr2 70072938 70074001 -180613853 + L2 LINE L2 2126 3278 -35 809 266 61 83 chr2 70074117 70074512 -180613342 - MLT1J2 LTR MaLR -13 437 52 1802 235 58 35 chr2 70074740 70075391 -180612463 - L1M4 LINE L1 -2153 3993 3328 414 211 31 62 chr2 70075415 70075543 -180612311 + L1ME LINE L1 5494 5617 -504 239 327 10 10 chr2 70075683 70075787 -180612067 + L2 LINE L2 1302 1405 -1909 1552 175 58 19 chr2 70075788 70076237 -180611617 + MLT2B1 LTR ERVL 1 515 0 1956 291 152 28 chr2 70076244 70077335 -180610519 + L2 LINE L2 1407 2633 -681 21 71 0 0 chr2 70077506 70077548 -180610306 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 70077763 70077791 -180610063 + AT_rich Low_complexity Low_complexity 1 28 0 5517 249 62 33 chr2 70077794 70081225 -180606629 - L1MEc LINE L1 -1759 4456 1128 426 69 0 0 chr2 70081225 70081283 -180606571 + (TG)n Simple_repeat Simple_repeat 2 59 0 1964 151 0 0 chr2 70081284 70081569 -180606285 - AluJb SINE Alu -27 285 1 5517 249 62 33 chr2 70081569 70081688 -180606166 - L1MEc LINE L1 -5087 1128 1014 2171 62 0 4 chr2 70081688 70081946 -180605908 - AluY SINE Alu -14 297 41 5517 249 62 33 chr2 70081946 70081981 -180605873 - L1MEc LINE L1 -5201 1014 805 1736 225 16 24 chr2 70081971 70082465 -180605389 - L1ME1 LINE L1 -43 6123 5634 * 1242 314 36 47 chr2 70082457 70083253 -180604601 - L1MEc LINE L1 -5571 825 38 * 588 281 125 49 chr2 70083269 70083319 -180604535 - L1ME1 LINE L1 -2163 3983 3938 2036 116 7 10 chr2 70083319 70083612 -180604242 + AluSg SINE Alu 1 292 -18 588 281 125 49 chr2 70083612 70083952 -180603902 - L1ME1 LINE L1 -2208 3938 3563 247 238 44 119 chr2 70084236 70084580 -180603274 - L1ME1 LINE L1 -3124 3022 2705 2321 96 0 3 chr2 70085027 70085319 -180602535 + AluSq SINE Alu 1 291 -22 1023 206 51 82 chr2 70085819 70086173 -180601681 - MER2 DNA MER2_type 0 344 2 7852 185 11 19 chr2 70086376 70087159 -180600695 + L1MA4A LINE L1 1249 2036 -4813 1768 118 0 0 chr2 70087159 70087421 -180600433 + L1PA14 LINE L1 5891 6152 -9 7852 185 11 19 chr2 70087421 70088305 -180599549 + L1MA4A LINE L1 2036 2904 -3945 1659 67 0 0 chr2 70088330 70088539 -180599315 - L1PA5 LINE L1 -8 6146 5938 644 136 0 8 chr2 70088737 70088855 -180598999 - L1PA5 LINE L1 -150 6004 5888 13472 171 36 8 chr2 70088857 70090895 -180596959 + L1MA4A LINE L1 2915 4894 -2111 2858 3 0 3 chr2 70090895 70091207 -180596647 - AluYa5 SINE Alu 0 311 1 13472 171 36 8 chr2 70091207 70093147 -180594707 + L1MA4A LINE L1 4894 6994 -11 424 392 35 14 chr2 70093297 70093626 -180594228 + L2 LINE L2 2766 3099 -173 250 364 0 33 chr2 70094404 70094525 -180593329 + MIR SINE MIR 24 140 -122 220 295 200 9 chr2 70094856 70094961 -180592893 - MIR3 SINE MIR -50 158 34 1237 298 37 39 chr2 70095017 70095534 -180592320 + LTR33 LTR ERVL 1 516 -5 249 306 0 0 chr2 70095557 70095619 -180592235 - MER5B DNA MER1_type -115 63 2 204 40 0 0 chr2 70095663 70095688 -180592166 + (CA)n Simple_repeat Simple_repeat 2 26 0 40439 34 25 1 chr2 70096992 70102986 -180584868 + L1PA2 LINE L1 13 6155 0 365 0 0 22 chr2 70103886 70103932 -180583922 + (TG)n Simple_repeat Simple_repeat 1 45 0 456 289 46 52 chr2 70104853 70105047 -180582807 - MIR SINE MIR -22 240 48 192 77 0 0 chr2 70106962 70106988 -180580866 + (TG)n Simple_repeat Simple_repeat 1 26 0 5631 123 23 0 chr2 70107062 70108300 -180579554 - L1PA16 LINE L1 -2 6164 4915 307 294 78 61 chr2 70110538 70110620 -180577234 + MER5A DNA MER1_type 1 80 -109 2279 110 0 7 chr2 70110620 70110929 -180576925 + AluSg1 SINE Alu 1 307 -2 307 294 78 61 chr2 70110929 70111026 -180576828 + MER5A DNA MER1_type 80 183 -6 391 294 192 0 chr2 70111156 70111302 -180576552 + MER5A DNA MER1_type 4 177 -12 354 289 16 138 chr2 70111624 70111799 -180576055 + L3 LINE CR1 1320 1456 -121 1078 151 17 0 chr2 70111799 70111971 -180575883 - FAM SINE Alu 0 175 1 354 289 16 138 chr2 70111971 70112048 -180575806 + L3 LINE CR1 1456 1541 -36 186 189 0 0 chr2 70112102 70112139 -180575715 + (CATA)n Simple_repeat Simple_repeat 2 38 0 581 282 7 0 chr2 70112477 70112619 -180575235 + MIR SINE MIR 99 241 -21 1987 149 0 3 chr2 70115155 70115451 -180572403 + AluSx SINE Alu 1 295 -17 301 135 19 0 chr2 70115955 70116007 -180571847 + MLT1K LTR MaLR 179 231 -357 225 108 27 0 chr2 70115974 70116011 -180571843 + MLT1L LTR MaLR 183 220 -395 * 418 194 41 20 chr2 70116244 70116342 -180571512 + MLT1K LTR MaLR 484 583 -5 763 288 42 8 chr2 70116351 70116591 -180571263 - MIR SINE MIR -10 252 5 689 245 128 0 chr2 70116738 70116926 -180570928 - L2 LINE L2 -3 3310 3099 3849 147 28 15 chr2 70117437 70118117 -180569737 + L1PA16 LINE L1 5473 6161 -5 365 265 146 47 chr2 70119558 70119759 -180568095 + MIR SINE MIR 3 220 -42 318 360 105 7 chr2 70120087 70120240 -180567614 + L2 LINE L2 3102 3269 -3 180 111 0 0 chr2 70120407 70120434 -180567420 + (TC)n Simple_repeat Simple_repeat 2 28 0 465 19 0 0 chr2 70120479 70120533 -180567321 + (TG)n Simple_repeat Simple_repeat 1 54 0 1234 119 4 102 chr2 70121525 70121761 -180566093 - AluSg/x SINE Alu -15 297 85 218 316 77 26 chr2 70123040 70123157 -180564697 - L2 LINE L2 -253 3019 2897 205 195 0 0 chr2 70125889 70125930 -180561924 + T-rich Low_complexity Low_complexity 2 42 0 360 246 82 0 chr2 70125997 70126107 -180561747 - L1ME1 LINE L1 -5 6161 6043 36316 35 19 6 chr2 70126109 70132152 -180555702 + L1PA3 LINE L1 13 6147 -8 1561 214 95 3 chr2 70132154 70132513 -180555341 - L1ME1 LINE L1 -118 6048 5657 1705 184 10 10 chr2 70132851 70133156 -180554698 + AluJo SINE Alu 1 305 -7 361 232 0 133 chr2 70133658 70133809 -180554045 + MER94 DNA DNA 3 133 -1 1538 184 3 21 chr2 70133992 70134275 -180553579 - AluJo SINE Alu -10 302 25 802 301 70 73 chr2 70134399 70135132 -180552722 + L2 LINE L2 2554 3297 -16 355 246 63 67 chr2 70135286 70135483 -180552371 - L1ME1 LINE L1 -728 5514 5317 342 251 146 62 chr2 70135518 70135841 -180552013 - L1ME1 LINE L1 -855 5291 4942 1153 199 0 37 chr2 70136074 70136320 -180551534 - AluJo SINE Alu 0 312 76 300 338 114 11 chr2 70136389 70136652 -180551202 - L1ME1 LINE L1 -1544 4602 4313 613 328 80 46 chr2 70136944 70137509 -180550345 - L2 LINE L2 0 3272 2680 348 283 92 25 chr2 70137625 70137745 -180550109 - L2 LINE L2 -8 3264 3137 714 259 70 0 chr2 70138473 70138658 -180549196 - MER58A DNA MER1_type -1 223 26 297 306 9 18 chr2 70138679 70138790 -180549064 - L2 LINE L2 -994 2320 2211 2305 95 0 43 chr2 70140224 70140551 -180547303 + AluSp SINE Alu 1 313 0 242 209 338 7 chr2 70141653 70141792 -180546062 - MER113 DNA MER1_type? -336 185 1 2864 161 6 58 chr2 70142948 70143487 -180544367 + L1MB2 LINE L1 5661 6171 0 381 293 108 0 chr2 70146172 70146329 -180541525 - MIR SINE MIR -8 254 81 202 186 0 23 chr2 70147773 70147816 -180540038 - MIR SINE MIR -109 153 112 416 298 99 11 chr2 70148653 70148834 -180539020 + MIR SINE MIR 32 228 -34 745 288 154 25 chr2 70150149 70150507 -180537347 + MER115 DNA AcHobo 290 693 0 427 255 185 23 chr2 70152734 70152950 -180534904 - MIR SINE MIR 0 262 12 276 278 33 22 chr2 70153651 70153741 -180534113 - MIR SINE MIR -14 248 158 364 182 0 39 chr2 70153761 70153838 -180534016 + LTR32 LTR ERVL 15 88 -383 * 2790 143 40 18 chr2 70153813 70154268 -180533586 + LTR32 LTR ERVL 7 471 0 2269 138 15 153 chr2 70154522 70155044 -180532810 + LTR32 LTR ERVL 22 471 0 279 0 0 0 chr2 70155090 70155121 -180532733 + (CA)n Simple_repeat Simple_repeat 2 32 0 2104 125 0 7 chr2 70156556 70156859 -180530995 + AluSx SINE Alu 5 305 -7 522 281 7 0 chr2 70157095 70157241 -180530613 - MER5B DNA MER1_type -5 173 27 306 317 58 19 chr2 70157370 70157530 -180530324 + MIR3 SINE MIR 35 202 -6 213 288 0 36 chr2 70158283 70158394 -180529460 + (CATATA)n Simple_repeat Simple_repeat 2 108 0 253 250 8 92 chr2 70158618 70158738 -180529116 + L1ME4a LINE L1 5785 5894 -227 334 264 132 14 chr2 70158773 70158917 -180528937 + L1ME4a LINE L1 5961 6121 0 219 188 0 0 chr2 70161615 70161663 -180526191 + T-rich Low_complexity Low_complexity 1 48 0 416 239 128 8 chr2 70163270 70163387 -180524467 + LTR67 LTR ERVL 427 557 0 3613 56 7 7 chr2 70163667 70164115 -180523739 + LTR7 LTR ERV1 1 448 -2 3332 93 7 0 chr2 70164117 70164570 -180523284 + HERVH LTR ERV1 1 456 -7257 7607 38 0 0 chr2 70214570 70216143 -180471711 + L1PA5 LINE L1 4407 5979 -175 301 169 72 0 chr2 70216243 70216326 -180471528 + L1MC2 LINE L1 6256 6344 0 3540 214 52 13 chr2 70216329 70217989 -180469865 + L1ME1 LINE L1 4398 6122 -44 1950 151 35 0 chr2 70218118 70218462 -180469392 + MER46B DNA MER2_type 6 236 0 3534 190 45 23 chr2 70218881 70220204 -180467650 + L1MB5 LINE L1 4705 6064 -110 1117 179 0 0 chr2 70220304 70220477 -180467377 - AluJo SINE Alu -139 173 1 2372 95 3 13 chr2 70220723 70221038 -180466816 - AluSp SINE Alu -1 312 1 543 267 113 27 chr2 70221519 70221740 -180466114 - MIR SINE MIR 0 262 23 420 248 47 49 chr2 70222226 70222375 -180465479 + MIR3 SINE MIR 59 208 0 229 242 16 0 chr2 70225309 70225371 -180462483 + (TA)n Simple_repeat Simple_repeat 1 63 0 454 273 0 0 chr2 70225724 70225834 -180462020 + MIR3 SINE MIR 98 207 -1 931 163 6 6 chr2 70225847 70226025 -180461829 + MER41B LTR ERV1 371 548 -87 211 261 22 0 chr2 70226043 70226089 -180461765 + MIR3 SINE MIR 111 157 -51 26 64 0 0 chr2 70226303 70226350 -180461504 + AT_rich Low_complexity Low_complexity 1 47 0 924 206 11 0 chr2 70226441 70226625 -180461229 - AluYa5 SINE Alu 0 311 126 1454 160 0 14 chr2 70226758 70227033 -180460821 - L1PA5 LINE L1 0 6154 5884 204 40 0 0 chr2 70228264 70228289 -180459565 + (CCGCG)n Simple_repeat Simple_repeat 3 27 0 290 87 22 0 chr2 70229369 70229415 -180458439 + (GA)n Simple_repeat Simple_repeat 2 48 0 216 158 0 0 chr2 70229615 70229653 -180458201 + CT-rich Low_complexity Low_complexity 2 39 0 207 0 0 0 chr2 70229828 70229851 -180458003 + (T)n Simple_repeat Simple_repeat 1 23 0 6189 103 3 8 chr2 70231710 70232646 -180455208 - L1PA10 LINE L1 0 6291 5391 270 194 97 0 chr2 70232642 70232704 -180455150 + L1P LINE L1 1792 1859 -4287 * 858 180 0 42 chr2 70232689 70232878 -180454976 - L1MA7 LINE L1 -138 6153 5973 271 330 0 0 chr2 70232946 70233043 -180454811 + MIR SINE MIR 45 141 -67 2202 118 0 10 chr2 70233049 70233363 -180454491 + AluSx SINE Alu 1 311 -1 236 319 74 115 chr2 70233498 70233768 -180454086 + L3 LINE CR1 1318 1576 -1 270 266 77 63 chr2 70234512 70234655 -180453199 + MIR3 SINE MIR 45 189 -19 337 292 28 28 chr2 70235159 70235303 -180452551 + L2 LINE L2 3118 3261 -52 213 292 42 0 chr2 70235413 70235485 -180452369 - MIR SINE MIR -69 139 65 442 230 58 73 chr2 70236878 70237069 -180450785 + MIR SINE MIR 63 250 -12 39763 42 30 2 chr2 70237938 70242800 -180445054 + L1P LINE L1 2 4997 -1149 24 0 0 0 chr2 70243115 70243139 -180444715 + AT_rich Low_complexity Low_complexity 1 24 0 1547 49 11 0 chr2 70243253 70243437 -180444417 - AluY SINE Alu 0 311 126 278 224 71 24 chr2 70243445 70243530 -180444324 - L1MC/D LINE L1 -1988 5820 5732 4802 41 2 0 chr2 70243574 70244116 -180443738 - L1PA5 LINE L1 -1 6153 5611 183 244 22 0 chr2 70244198 70244243 -180443611 - L2 LINE L2 -5 3308 3263 212 244 111 89 chr2 70244696 70244831 -180443023 - MIR SINE MIR -7 255 118 1967 130 4 7 chr2 70246066 70246343 -180441511 - AluSx SINE Alu -36 276 1 373 203 0 0 chr2 70247599 70247663 -180440191 + L2 LINE L2 3208 3271 -1 21 0 0 0 chr2 70247712 70247733 -180440121 + AT_rich Low_complexity Low_complexity 1 21 0 310 341 70 0 chr2 70249204 70249333 -180438521 - MLT1J LTR MaLR -51 460 323 438 217 122 9 chr2 70249602 70249717 -180438137 - MLT1J LTR MaLR -316 195 68 1030 253 92 6 chr2 70250735 70251063 -180436791 + LTR16A1 LTR ERVL 102 457 0 23 54 0 0 chr2 70251520 70251557 -180436297 + AT_rich Low_complexity Low_complexity 1 37 0 310 154 19 0 chr2 70254813 70254865 -180432989 + L1MA8 LINE L1 5713 5765 -535 1026 150 0 7 chr2 70254865 70255018 -180432836 + FRAM SINE Alu 1 150 -26 3042 131 51 12 chr2 70255032 70255543 -180432311 + L1MA8 LINE L1 5759 6289 -2 1836 113 50 20 chr2 70259592 70259893 -180427961 + AluSg SINE Alu 1 310 0 389 318 162 23 chr2 70259931 70260233 -180427621 - MLT1I LTR MaLR -1 408 65 2439 99 3 0 chr2 70260517 70260829 -180427025 - AluSp SINE Alu 0 313 1 234 321 105 19 chr2 70261036 70261198 -180426656 - MIR SINE MIR -1 261 86 552 303 171 13 chr2 70261323 70261633 -180426221 + L2 LINE L2 2955 3313 0 364 274 51 0 chr2 70261814 70261931 -180425923 + L1ME3 LINE L1 6040 6162 0 1640 177 32 0 chr2 70261951 70262228 -180425626 + AluJb SINE Alu 21 306 -6 23 24 0 24 chr2 70262228 70262248 -180425606 + AT_rich Low_complexity Low_complexity 1 20 -20 2082 147 0 0 chr2 70262248 70262555 -180425299 + AluSx SINE Alu 1 307 -5 23 24 0 24 chr2 70262555 70262575 -180425279 + AT_rich Low_complexity Low_complexity 20 40 0 21 0 0 0 chr2 70262591 70262612 -180425242 + AT_rich Low_complexity Low_complexity 1 21 0 7836 23 0 2 chr2 70263608 70264468 -180423386 + L1PA2 LINE L1 5298 6155 0 194 188 0 0 chr2 70264705 70264737 -180423117 + MER5A DNA MER1_type 115 146 -43 193 345 0 0 chr2 70264865 70264920 -180422934 - L2 LINE L2 -13 3300 3246 293 378 87 6 chr2 70265123 70265295 -180422559 + MER5A DNA MER1_type 1 186 -3 668 249 17 12 chr2 70265394 70265567 -180422287 + L1MEc LINE L1 35 208 -6188 412 250 8 65 chr2 70265573 70265697 -180422157 + L1MEc LINE L1 251 367 -6029 953 241 16 97 chr2 70265726 70266179 -180421675 + L1M4 LINE L1 3340 3755 -2391 1503 160 67 11 chr2 70266196 70266464 -180421390 + MER2 DNA MER2_type 9 291 -54 1972 158 37 0 chr2 70266569 70266891 -180420963 + LTR32 LTR ERVL 16 349 -122 794 199 0 7 chr2 70267019 70267165 -180420689 + LTR32 LTR ERVL 327 471 0 589 209 20 75 chr2 70267165 70267366 -180420488 + L1M4 LINE L1 3790 3979 -2167 1040 156 40 0 chr2 70267367 70267540 -180420314 + MLT1C LTR MaLR 1 180 -287 649 247 36 12 chr2 70267541 70267707 -180420147 + MLT1C LTR MaLR 298 467 0 1609 230 44 12 chr2 70267707 70268116 -180419738 + L1M4 LINE L1 3980 4401 -1745 * 1620 208 147 90 chr2 70268112 70268766 -180419088 + L1MC3 LINE L1 7 697 -5729 786 240 26 18 chr2 70268764 70268993 -180418861 - L1MEc LINE L1 -3569 2646 2416 * 1678 240 62 30 chr2 70268991 70269524 -180418330 + L1MC3 LINE L1 4181 4730 -1696 1271 194 12 28 chr2 70269546 70269793 -180418061 + AluJo SINE Alu 47 289 -23 11153 180 56 53 chr2 70269793 70271597 -180416257 + L1MC3 LINE L1 4724 6521 -1544 1845 123 0 61 chr2 70271597 70271907 -180415947 + AluSg SINE Alu 7 297 -13 11153 180 56 53 chr2 70271907 70272529 -180415325 + L1MC3 LINE L1 6521 7140 -925 240 35 0 0 chr2 70272529 70272558 -180415296 + (CA)n Simple_repeat Simple_repeat 2 30 0 11153 180 56 53 chr2 70272558 70273343 -180414511 + L1MC3 LINE L1 7140 7933 -132 32149 72 2 0 chr2 70273455 70277566 -180410288 - L1P LINE L1 -2027 4119 1 241 302 0 0 chr2 70277987 70278050 -180409804 - L2 LINE L2 -1 3312 3250 294 298 60 24 chr2 70278434 70278602 -180409252 - L1MEc LINE L1 -5312 941 720 552 295 92 7 chr2 70279090 70279351 -180408503 - L1MEc LINE L1 -5762 443 36 588 249 94 45 chr2 70279433 70279634 -180408220 + MLT1L LTR MaLR 405 615 0 183 308 108 0 chr2 70279634 70279699 -180408155 - L3 LINE CR1 -330 1247 1176 2266 122 54 25 chr2 70280198 70280552 -180407302 - THE1B LTR MaLR 0 364 1 2248 108 3 3 chr2 70280752 70281058 -180406796 + AluSq SINE Alu 1 306 -7 261 267 22 11 chr2 70281111 70281201 -180406653 - LTR67 LTR ERVL -8 549 459 531 355 30 40 chr2 70281423 70281722 -180406132 - LTR67 LTR ERVL -232 325 30 219 219 146 12 chr2 70281771 70281853 -180406001 + MIR SINE MIR 153 245 -17 244 276 0 0 chr2 70283124 70283182 -180404672 + MLT1K LTR MaLR 505 562 -26 2242 128 149 11 chr2 70283183 70283559 -180404295 - MSTA LTR MaLR 0 428 1 1683 196 6 20 chr2 70284361 70284703 -180403151 + MSTD LTR MaLR 1 337 -59 4571 103 37 30 chr2 70284728 70285083 -180402771 - L1PB1 LINE L1 -1 6150 5799 393 117 0 0 chr2 70285083 70285143 -180402711 + (TG)n Simple_repeat Simple_repeat 2 61 0 4571 103 37 30 chr2 70285143 70285564 -180402290 - L1PB1 LINE L1 -352 5799 5368 565 88 0 0 chr2 70285564 70285644 -180402210 + MSTD LTR MaLR 317 396 0 25 83 0 0 chr2 70286062 70286122 -180401732 + AT_rich Low_complexity Low_complexity 1 60 0 2235 99 0 0 chr2 70286751 70287070 -180400784 + AluSg SINE Alu 1 319 0 1804 154 0 33 chr2 70288273 70288579 -180399275 - AluSx SINE Alu -16 296 1 22 0 0 0 chr2 70288881 70288903 -180398951 + AT_rich Low_complexity Low_complexity 1 22 0 306 319 80 59 chr2 70290148 70290292 -180397562 + L1ME4a LINE L1 5550 5690 -431 279 0 0 0 chr2 70290292 70290323 -180397531 + (CA)n Simple_repeat Simple_repeat 2 32 0 306 319 80 59 chr2 70290323 70290516 -180397338 + L1ME4a LINE L1 5690 5894 -227 1042 144 0 40 chr2 70290687 70290860 -180396994 - FRAM SINE Alu 0 166 1 1699 161 0 58 chr2 70291212 70291522 -180396332 + AluJo SINE Alu 1 292 -20 2017 95 3 44 chr2 70292784 70293099 -180394755 + AluSq SINE Alu 1 302 -11 193 295 0 16 chr2 70293461 70293522 -180394332 + MIR SINE MIR 186 245 -17 184 213 107 27 chr2 70295276 70295351 -180392503 + MIR SINE MIR 127 207 -55 281 300 171 18 chr2 70298274 70298444 -180389410 - MIR3 SINE MIR -5 203 8 215 241 0 0 chr2 70298828 70298882 -180388972 + A-rich Low_complexity Low_complexity 4 57 0 267 103 0 0 chr2 70299321 70299360 -180388494 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 336 48 0 0 chr2 70299722 70299764 -180388090 + (TG)n Simple_repeat Simple_repeat 2 43 0 314 286 0 0 chr2 70299809 70299879 -180387975 + MIR3 SINE MIR 92 161 -47 216 0 0 0 chr2 70300087 70300111 -180387743 + (CA)n Simple_repeat Simple_repeat 1 24 0 201 74 0 0 chr2 70302742 70302769 -180385085 + (TG)n Simple_repeat Simple_repeat 2 28 0 212 0 0 35 chr2 70303336 70303365 -180384489 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 24 0 0 0 chr2 70304022 70304046 -180383808 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr2 70306409 70306430 -180381424 + (TA)n Simple_repeat Simple_repeat 2 22 0 24 32 0 0 chr2 70308584 70308615 -180379239 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr2 70308642 70308677 -180379177 + AT_rich Low_complexity Low_complexity 1 35 0 264 167 0 0 chr2 70308865 70308913 -180378941 + T-rich Low_complexity Low_complexity 1 48 0 228 200 0 0 chr2 70309852 70309902 -180377952 + (CA)n Simple_repeat Simple_repeat 2 51 0 226 233 0 33 chr2 70311719 70311779 -180376075 + G-rich Low_complexity Low_complexity 2 59 0 216 0 0 0 chr2 70312079 70312103 -180375751 + (A)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr2 70314463 70314486 -180373368 + GC_rich Low_complexity Low_complexity 1 23 0 213 39 0 0 chr2 70315605 70315631 -180372223 + (TTTCC)n Simple_repeat Simple_repeat 3 28 0 25 0 0 0 chr2 70315650 70315675 -180372179 + AT_rich Low_complexity Low_complexity 1 25 0 213 159 0 0 chr2 70317624 70317668 -180370186 + CT-rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 70318859 70318889 -180368965 + AT_rich Low_complexity Low_complexity 1 30 0 575 220 34 0 chr2 70320146 70320264 -180367590 + FLAM_A SINE Alu 12 133 -9 606 291 99 0 chr2 70323803 70323975 -180363879 + MIR SINE MIR 32 220 -42 219 186 43 14 chr2 70327708 70327778 -180360076 + A-rich Low_complexity Low_complexity 5 76 0 196 259 19 37 chr2 70328422 70328476 -180359378 + MIR3 SINE MIR 108 160 -48 351 349 183 20 chr2 70329062 70329363 -180358491 + L1ME4a LINE L1 5341 5690 -472 29 0 0 0 chr2 70329790 70329819 -180358035 + AT_rich Low_complexity Low_complexity 1 29 0 309 274 105 0 chr2 70330007 70330102 -180357752 - MLT1J2 LTR MaLR -2 448 344 568 206 8 23 chr2 70330257 70330388 -180357466 - MLT1J1 LTR MaLR -317 129 1 1126 106 0 25 chr2 70330657 70330850 -180357004 - AluSg/x SINE Alu 0 315 127 318 260 57 49 chr2 70331035 70331158 -180356696 + MIR SINE MIR 113 236 -26 245 284 136 45 chr2 70331269 70331600 -180356254 + L1ME4a LINE L1 5746 6106 -15 309 305 25 0 chr2 70331657 70331775 -180356079 - L1MC4 LINE L1 -2 8040 7920 307 323 115 8 chr2 70331968 70332098 -180355756 + MIR3 SINE MIR 19 162 -46 1162 117 0 0 chr2 70332175 70332346 -180355508 + L1PA13 LINE L1 5989 6159 -4 354 336 56 0 chr2 70333120 70333245 -180354609 + MIR3 SINE MIR 36 167 -41 2216 117 10 3 chr2 70333247 70333556 -180354298 - AluSx SINE Alu -1 311 1 21 36 0 0 chr2 70333556 70333584 -180354270 + AT_rich Low_complexity Low_complexity 1 28 0 4640 136 31 18 chr2 70333585 70334426 -180353428 - L1PA16 LINE L1 -16 6150 5299 304 284 0 11 chr2 70334892 70334987 -180352867 - MLT1K LTR MaLR -6 582 489 269 276 46 11 chr2 70334987 70335074 -180352780 - MLT1L LTR MaLR -150 465 376 4547 126 59 9 chr2 70335324 70336118 -180351736 + MER6 DNA MER2_type 32 865 0 2157 159 89 10 chr2 70336287 70336682 -180351172 + MSTB LTR MaLR 1 426 0 22 0 0 0 chr2 70336770 70336792 -180351062 + AT_rich Low_complexity Low_complexity 1 22 0 1521 203 37 3 chr2 70336802 70337098 -180350756 + AluJo SINE Alu 1 306 -6 260 247 161 12 chr2 70337962 70338043 -180349811 - L2 LINE L2 0 3272 3180 221 314 131 15 chr2 70338243 70338380 -180349474 + MIR SINE MIR 9 161 -101 324 0 0 0 chr2 70339635 70339671 -180348183 + (CA)n Simple_repeat Simple_repeat 2 37 0 1120 238 162 52 chr2 70340089 70340495 -180347359 - Charlie7 DNA MER1_type 0 2612 2252 2155 65 0 42 chr2 70340495 70340801 -180347053 + AluY SINE Alu 1 293 -18 1120 238 162 52 chr2 70340801 70341184 -180346670 - Charlie7 DNA MER1_type -360 2252 1736 672 253 111 58 chr2 70341271 70341792 -180346062 - Charlie7 DNA MER1_type -2035 577 29 429 296 78 70 chr2 70341819 70342204 -180345650 + L2 LINE L2 2926 3313 0 310 394 13 7 chr2 70342247 70342402 -180345452 - MIR3 SINE MIR -35 173 18 400 312 42 9 chr2 70342746 70342954 -180344900 + L1ME LINE L1 5467 5593 -528 2205 97 27 0 chr2 70343091 70343389 -180344465 - AluSc SINE Alu -3 306 1 234 0 0 0 chr2 70344622 70344648 -180343206 + (TG)n Simple_repeat Simple_repeat 2 27 0 1908 110 0 43 chr2 70345780 70346062 -180341792 - AluSg SINE Alu -12 298 29 532 241 29 62 chr2 70350678 70350919 -180336935 - MER113 DNA MER1_type? -288 233 1 388 250 26 60 chr2 70351013 70351129 -180336725 - MIR SINE MIR -73 189 78 216 0 0 0 chr2 70352066 70352090 -180335764 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 195 302 0 0 chr2 70354033 70354086 -180333768 + MER5A DNA MER1_type 74 126 -63 21 36 0 0 chr2 70354889 70354917 -180332937 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr2 70356086 70356112 -180331742 + (CA)n Simple_repeat Simple_repeat 2 27 0 25 0 0 0 chr2 70357011 70357036 -180330818 + AT_rich Low_complexity Low_complexity 1 25 0 368 275 255 10 chr2 70358388 70358588 -180329266 - MIR SINE MIR -12 250 2 483 321 96 77 chr2 70358751 70359948 -180327906 - L2 LINE L2 -1 3271 2057 187 277 71 80 chr2 70360031 70360143 -180327711 - L2 LINE L2 0 3272 3162 328 208 21 31 chr2 70360263 70360359 -180327495 + L3 LINE CR1 1178 1272 -305 309 26 0 0 chr2 70360590 70360628 -180327226 + (TTG)n Simple_repeat Simple_repeat 2 39 0 24 0 0 0 chr2 70361052 70361076 -180326778 + AT_rich Low_complexity Low_complexity 1 24 0 266 313 87 10 chr2 70365976 70366108 -180321746 - MIR SINE MIR -62 146 6 291 175 0 0 chr2 70366792 70366849 -180321005 + A-rich Low_complexity Low_complexity 1 57 0 2156 103 3 7 chr2 70367165 70367466 -180320388 + AluSg SINE Alu 1 300 -10 181 308 39 39 chr2 70367814 70367918 -180319936 - MIR SINE MIR -73 189 86 517 290 30 3 chr2 70368303 70368495 -180319359 - MIR SINE MIR -10 198 1 207 381 24 8 chr2 70368553 70368679 -180319175 - L2 LINE L2 -8 3264 3137 224 315 120 0 chr2 70372275 70372367 -180315487 - L2 LINE L2 -10 3303 3201 1598 191 25 50 chr2 70372786 70372947 -180314907 - Charlie4a DNA MER1_type -1481 480 316 2387 93 3 0 chr2 70372947 70373248 -180314606 + AluSp SINE Alu 1 302 -11 189 0 0 0 chr2 70373248 70373269 -180314585 + (TA)n Simple_repeat Simple_repeat 1 21 0 1598 191 25 50 chr2 70373269 70373582 -180314272 - Charlie4a DNA MER1_type -1643 318 17 1945 144 3 35 chr2 70373665 70374012 -180313842 + MER2 DNA MER2_type 2 337 -8 405 167 33 4 chr2 70374974 70375228 -180312626 + (TA)n Simple_repeat Simple_repeat 1 261 0 204 222 48 48 chr2 70375619 70375682 -180312172 + L2 LINE L2 3246 3308 -5 254 344 98 0 chr2 70376273 70376395 -180311459 - L2 LINE L2 -3 3269 3136 255 235 29 49 chr2 70376528 70376630 -180311224 - MER117 DNA MER1_type -50 147 48 2313 97 0 22 chr2 70381697 70382008 -180305846 - AluSc SINE Alu -3 306 3 283 238 0 32 chr2 70382012 70382075 -180305779 - L2 LINE L2 0 3272 3212 406 283 106 0 chr2 70382470 70382583 -180305271 - L2 LINE L2 0 3272 3148 435 285 49 0 chr2 70382842 70382965 -180304889 + MIR SINE MIR 128 256 -6 841 96 0 29 chr2 70383087 70383223 -180304631 - FLAM_C SINE Alu 0 133 2 207 0 0 0 chr2 70384385 70384408 -180303446 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2116 137 0 3 chr2 70384410 70384710 -180303144 - AluSp SINE Alu -14 299 1 9331 85 6 1 chr2 70384953 70387014 -180300840 - L1PA7 LINE L1 -4 6150 4084 248 278 26 0 chr2 70387088 70387203 -180300651 - L1MC4 LINE L1 0 8042 7925 2486 68 0 0 chr2 70388247 70388543 -180299311 + AluY SINE Alu 1 296 -15 216 143 0 0 chr2 70391920 70391962 -180295892 + (TG)n Simple_repeat Simple_repeat 1 42 0 292 269 183 0 chr2 70394300 70394404 -180293450 - L2 LINE L2 -4 3268 3146 240 351 76 43 chr2 70394546 70394731 -180293123 - MIR SINE MIR -46 216 26 252 0 0 0 chr2 70394927 70394955 -180292899 + (T)n Simple_repeat Simple_repeat 1 28 0 707 285 123 0 chr2 70448294 70448522 -180239332 + MIR SINE MIR 2 257 -5 2215 114 10 0 chr2 70448979 70449287 -180238567 - AluY SINE Alu 0 311 1 688 249 55 11 chr2 70449600 70449781 -180238073 + MIR SINE MIR 43 231 -31 354 317 129 7 chr2 70450107 70450336 -180237518 + MIR SINE MIR 2 257 -5 1789 133 77 3 chr2 70450412 70450698 -180237156 - AluSq SINE Alu -6 307 1 2392 82 7 0 chr2 70451128 70451431 -180236423 - AluY SINE Alu 0 311 7 22 0 0 0 chr2 70454730 70454752 -180233102 + AT_rich Low_complexity Low_complexity 1 22 0 224 292 31 0 chr2 70455573 70455638 -180232216 - MIR SINE MIR -129 133 67 233 304 101 0 chr2 70456075 70456154 -180231700 - L2 LINE L2 0 3272 3186 220 226 37 93 chr2 70456617 70456735 -180231119 + MIR SINE MIR 69 187 -48 468 0 0 0 chr2 70460565 70460617 -180227237 + (TTTTG)n Simple_repeat Simple_repeat 1 52 0 1718 160 4 4 chr2 70460619 70460894 -180226960 - AluJo SINE Alu -33 279 5 23 0 0 0 chr2 70461715 70461738 -180226116 + AT_rich Low_complexity Low_complexity 1 23 0 261 0 0 0 chr2 70462129 70462158 -180225696 + (CA)n Simple_repeat Simple_repeat 2 30 0 266 0 0 29 chr2 70465355 70465390 -180222464 + (TC)n Simple_repeat Simple_repeat 1 34 0 2034 153 32 36 chr2 70467363 70467801 -180220053 - L1MB8 LINE L1 -1 6177 5742 2349 106 3 0 chr2 70468098 70468410 -180219444 + AluSp SINE Alu 1 313 0 2054 139 30 0 chr2 70468960 70469224 -180218630 + AluSq SINE Alu 1 277 -36 261 0 0 0 chr2 70469224 70469253 -180218601 + (GA)n Simple_repeat Simple_repeat 2 30 0 2054 139 30 0 chr2 70469253 70469291 -180218563 + AluSq SINE Alu 277 312 -1 604 200 31 0 chr2 70469387 70469517 -180218337 - MER94 DNA DNA 0 134 1 21 57 0 0 chr2 70469884 70469919 -180217935 + AT_rich Low_complexity Low_complexity 1 35 0 1636 198 4 0 chr2 70469923 70470196 -180217658 - AluJb SINE Alu -38 274 1 207 0 0 0 chr2 70470201 70470224 -180217630 + (T)n Simple_repeat Simple_repeat 1 23 0 1663 153 60 27 chr2 70470412 70470712 -180217142 + AluJb SINE Alu 1 310 -2 288 0 0 0 chr2 70472139 70472171 -180215683 + (T)n Simple_repeat Simple_repeat 1 32 0 222 319 0 0 chr2 70473480 70473549 -180214305 + (CATA)n Simple_repeat Simple_repeat 2 70 0 395 257 42 111 chr2 70474499 70474760 -180213094 + L3 LINE CR1 1052 1294 -283 438 55 11 132 chr2 70474797 70474823 -180213031 - MADE1 DNA Mariner 0 80 52 1306 26 0 0 chr2 70474823 70474979 -180212875 - L1PA5 LINE L1 0 6154 5999 438 55 11 132 chr2 70474979 70475043 -180212811 - MADE1 DNA Mariner -28 52 1 277 321 134 32 chr2 70475058 70475245 -180212609 + L3 LINE CR1 1369 1574 -3 211 184 41 0 chr2 70475636 70475685 -180212169 + MIR SINE MIR 67 117 -145 266 217 17 33 chr2 70475691 70475751 -180212103 + MIR SINE MIR 85 143 -65 22 0 0 0 chr2 70475951 70475973 -180211881 + AT_rich Low_complexity Low_complexity 1 22 0 252 143 0 0 chr2 70482101 70482143 -180205711 + (TC)n Simple_repeat Simple_repeat 2 43 0 24 0 0 0 chr2 70483393 70483417 -180204437 + AT_rich Low_complexity Low_complexity 1 24 0 230 114 0 23 chr2 70484085 70484129 -180203725 + (GA)n Simple_repeat Simple_repeat 1 43 0 220 186 0 0 chr2 70484508 70484551 -180203303 + G-rich Low_complexity Low_complexity 1 43 0 34 42 0 0 chr2 70484575 70484623 -180203231 + AT_rich Low_complexity Low_complexity 1 48 0 198 118 0 0 chr2 70484955 70484989 -180202865 + (CAG)n Simple_repeat Simple_repeat 3 36 0 205 244 0 0 chr2 70485066 70485111 -180202743 + C-rich Low_complexity Low_complexity 6 50 0 224 228 35 18 chr2 70485436 70485550 -180202304 + CT-rich Low_complexity Low_complexity 6 121 0 353 320 78 78 chr2 70486143 70486452 -180201402 - L1M2 LINE L1 -5701 1148 840 200 275 25 12 chr2 70487875 70487955 -180199899 + CT-rich Low_complexity Low_complexity 5 85 0 25 0 0 0 chr2 70489755 70489780 -180198074 + GC_rich Low_complexity Low_complexity 1 25 0 204 40 0 0 chr2 70490041 70490066 -180197788 + (GA)n Simple_repeat Simple_repeat 2 26 0 206 156 22 0 chr2 70490960 70491005 -180196849 + T-rich Low_complexity Low_complexity 1 46 0 248 0 31 0 chr2 70491320 70491352 -180196502 + (TC)n Simple_repeat Simple_repeat 1 33 0 225 0 0 0 chr2 70491351 70491376 -180196478 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 471 18 0 0 chr2 70494718 70494774 -180193080 + (TA)n Simple_repeat Simple_repeat 2 57 0 1035 48 0 0 chr2 70496219 70496345 -180191509 + AluY SINE Alu 175 300 -11 26 30 0 0 chr2 70496516 70496549 -180191305 + AT_rich Low_complexity Low_complexity 1 33 0 848 259 69 46 chr2 70497343 70497691 -180190163 - LTR33A LTR ERVL -6 517 162 180 360 143 11 chr2 70497797 70497986 -180189868 - L2 LINE L2 -339 2975 2762 278 303 211 16 chr2 70498353 70498723 -180189131 - L2 LINE L2 -642 2672 2231 303 286 0 0 chr2 70499147 70499224 -180188630 - MER81 DNA DNA -37 77 1 1809 173 25 69 chr2 70500251 70500551 -180187303 + MLT1B LTR MaLR 5 284 -106 2376 116 36 33 chr2 70500551 70500912 -180186942 - THE1B LTR MaLR -2 362 1 1809 173 25 69 chr2 70500912 70501015 -180186839 + MLT1B LTR MaLR 284 390 0 2357 113 0 0 chr2 70501321 70501630 -180186224 - AluSc SINE Alu 0 309 1 2487 70 0 3 chr2 70502219 70502531 -180185323 + AluY SINE Alu 1 311 0 240 296 47 77 chr2 70502531 70502700 -180185154 + MIR SINE MIR 59 222 -40 3685 119 2 26 chr2 70503140 70503677 -180184177 + MER1A DNA MER1_type 6 529 0 2153 108 3 26 chr2 70503728 70504034 -180183820 - AluSx SINE Alu -11 301 3 353 221 12 23 chr2 70504328 70504414 -180183440 - L1MC5 LINE L1 -46 7915 7831 2089 129 0 10 chr2 70504444 70504747 -180183107 - AluSx SINE Alu -12 300 1 2934 211 78 40 chr2 70504944 70505154 -180182700 - L1MC3 LINE L1 0 8042 7842 2124 124 13 0 chr2 70505154 70505324 -180182530 - AluSg SINE Alu -8 302 125 378 0 0 0 chr2 70505324 70505366 -180182488 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 2124 124 13 0 chr2 70505366 70505493 -180182361 - AluSg SINE Alu -185 125 1 2934 211 78 40 chr2 70505493 70506117 -180181737 - L1MC3 LINE L1 -200 7842 7190 896 194 32 40 chr2 70506093 70506341 -180181513 - L1MC4 LINE L1 -871 7171 6926 * 21 0 0 0 chr2 70506451 70506472 -180181382 + AT_rich Low_complexity Low_complexity 1 21 0 249 380 23 8 chr2 70507291 70507420 -180180434 + MIR3 SINE MIR 10 140 -68 1082 205 27 145 chr2 70507425 70507794 -180180060 - MLT1A1 LTR MaLR 0 365 49 2219 108 3 25 chr2 70507794 70508110 -180179744 + AluSq SINE Alu 1 309 -4 1082 205 27 145 chr2 70508110 70508154 -180179700 - MLT1A1 LTR MaLR -316 49 1 449 289 242 5 chr2 70508297 70508508 -180179346 - MIR SINE MIR 0 262 2 511 108 0 0 chr2 70508800 70508874 -180178980 + L1PA10 LINE L1 6095 6168 0 361 43 0 0 chr2 70508909 70508956 -180178898 - MADE1 DNA Mariner 0 80 34 1158 259 46 64 chr2 70509117 70509362 -180178492 + MLT1J LTR MaLR 1 236 -275 1343 116 0 37 chr2 70509362 70509577 -180178277 - L1PA14 LINE L1 -1 6160 5954 1158 259 46 64 chr2 70509577 70509786 -180178068 + MLT1J LTR MaLR 236 447 -64 455 184 0 29 chr2 70509786 70509922 -180177932 + CT-rich Low_complexity Low_complexity 4 135 0 316 154 84 102 chr2 70511116 70511256 -180176598 - MIR3 SINE MIR 0 208 75 294 29 0 0 chr2 70512346 70512381 -180175473 + (TA)n Simple_repeat Simple_repeat 2 36 0 219 216 39 0 chr2 70513578 70513629 -180174225 + CT-rich Low_complexity Low_complexity 3 55 0 328 292 118 21 chr2 70515631 70515775 -180172079 + MIR3 SINE MIR 34 191 -17 807 181 0 36 chr2 70515875 70516013 -180171841 - FLAM_C SINE Alu 0 133 1 2957 9 0 0 chr2 70516023 70516341 -180171513 - AluYb8 SINE Alu 0 318 1 21 36 0 0 chr2 70517259 70517287 -180170567 + AT_rich Low_complexity Low_complexity 1 28 0 4510 135 7 17 chr2 70517380 70518099 -180169755 + MER50 LTR ERV1 1 712 -22 21 0 0 0 chr2 70518624 70518645 -180169209 + AT_rich Low_complexity Low_complexity 1 21 0 2055 141 0 20 chr2 70518760 70519066 -180168788 - AluSx SINE Alu -12 300 1 38545 86 11 7 chr2 70519746 70525859 -180161995 - L1PA6 LINE L1 -4 6150 11 22 80 0 0 chr2 70526172 70526222 -180161632 + AT_rich Low_complexity Low_complexity 1 50 0 237 283 22 29 chr2 70526295 70526433 -180161421 + L1P LINE L1 4876 5012 -1134 2211 166 28 10 chr2 70526526 70527195 -180160659 + L1MB7 LINE L1 4931 5612 -566 * 20575 34 1 83 chr2 70527193 70528526 -180159328 - L1PA5 LINE L1 -1 6153 4712 2859 196 20 7 chr2 70528526 70529085 -180158769 + L1MB7 LINE L1 5599 6165 -19 20575 34 1 83 chr2 70529085 70531502 -180156352 - L1PA5 LINE L1 -1442 4712 2714 * 26200 128 25 73 chr2 70531498 70536535 -180151319 - L1P LINE L1 -1343 4803 9 1350 82 82 20 chr2 70536547 70536742 -180151112 - L1PA13 LINE L1 -1 6162 5956 1721 169 0 7 chr2 70536792 70537071 -180150783 + AluJb SINE Alu 1 277 -35 41535 42 1 1 chr2 70537186 70543336 -180144518 - L1PA3 LINE L1 0 6155 6 516 311 51 34 chr2 70543531 70543824 -180144030 - MLT1J LTR MaLR 0 511 214 200 238 0 0 chr2 70544061 70544103 -180143751 + (TAA)n Simple_repeat Simple_repeat 2 43 0 260 306 156 5 chr2 70544104 70544290 -180143564 - MIR SINE MIR -1 261 48 285 254 0 0 chr2 70544311 70544374 -180143480 - MER81 DNA DNA -25 89 27 2852 13 0 0 chr2 70544521 70544832 -180143022 + AluYa5 SINE Alu 1 311 0 21 36 0 0 chr2 70545734 70545762 -180142092 + AT_rich Low_complexity Low_complexity 1 28 0 1086 182 51 5 chr2 70545770 70545984 -180141870 - MER58A DNA MER1_type 0 224 1 243 277 21 0 chr2 70546714 70546808 -180141046 + (TA)n Simple_repeat Simple_repeat 1 96 0 298 297 22 7 chr2 70547001 70547139 -180140715 - MARNA DNA Mariner -238 348 209 5008 94 4 12 chr2 70547161 70547962 -180139892 + L1P LINE L1 3001 3794 -2352 350 294 73 0 chr2 70547968 70548104 -180139750 - MARNA DNA Mariner -430 156 11 2231 119 0 0 chr2 70549161 70549473 -180138381 + AluSx SINE Alu 1 312 0 600 187 20 20 chr2 70549484 70549634 -180138220 + MER103 DNA DNA 7 156 -10 279 0 0 0 chr2 70549701 70549732 -180138122 + (CA)n Simple_repeat Simple_repeat 2 32 0 383 297 50 14 chr2 70549798 70550020 -180137834 - L1ME4a LINE L1 -253 5868 5639 2666 165 30 14 chr2 70551472 70551981 -180135873 - MER44D DNA MER2_type -6 599 211 792 242 48 24 chr2 70552013 70552265 -180135589 + MIR SINE MIR 2 259 -3 726 69 0 0 chr2 70552321 70552422 -180135432 + (TTCC)n Simple_repeat Simple_repeat 1 101 0 1429 186 58 28 chr2 70552424 70552715 -180135139 - AluJo SINE Alu -12 300 1 40854 44 11 0 chr2 70552749 70558844 -180129010 - L1PA4 LINE L1 0 6155 1 336 77 0 0 chr2 70559472 70559524 -180128330 + (CA)n Simple_repeat Simple_repeat 2 53 0 1149 223 196 9 chr2 70559741 70560181 -180127673 - Charlie1b DNA MER1_type 0 523 2 2174 270 45 10 chr2 70560261 70560946 -180126908 + HsTC2c DNA Tc2 8 716 -13 2045 197 37 24 chr2 70560979 70561440 -180126414 - MLT1C LTR MaLR 0 467 1 644 272 110 56 chr2 70561469 70561896 -180125958 + MLT1I LTR MaLR 1 409 0 3121 196 36 33 chr2 70561997 70562698 -180125156 + L1M4 LINE L1 3829 4526 -1620 185 65 32 0 chr2 70562698 70562729 -180125125 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 925 102 7 0 chr2 70562731 70562868 -180124986 - L1PA14 LINE L1 -7 6154 6017 3121 196 36 33 chr2 70562868 70563053 -180124801 + L1M4 LINE L1 4526 4721 -1425 21 36 0 0 chr2 70563108 70563136 -180124718 + AT_rich Low_complexity Low_complexity 1 28 0 958 275 36 42 chr2 70563142 70563502 -180124352 - MLT1I LTR MaLR 0 409 52 213 39 0 0 chr2 70564976 70565002 -180122852 + (TG)n Simple_repeat Simple_repeat 1 26 0 730 228 65 78 chr2 70565109 70565513 -180122341 - MLT1A2 LTR MaLR 0 390 1 186 244 0 0 chr2 70566205 70566246 -180121608 + L2 LINE L2 3272 3312 -1 1270 178 35 0 chr2 70566504 70566791 -180121063 + L1P LINE L1 4233 4529 -1617 17825 187 26 21 chr2 70566812 70572666 -180115188 - L1PA13 LINE L1 -891 5906 1 1023 218 59 28 chr2 70572787 70573033 -180114821 - L1ME2 LINE L1 -16 6148 5911 459 0 0 0 chr2 70573033 70573084 -180114770 + (TA)n Simple_repeat Simple_repeat 1 51 0 369 0 0 0 chr2 70573083 70573124 -180114730 + (TG)n Simple_repeat Simple_repeat 2 42 0 * 1023 218 59 28 chr2 70573084 70573245 -180114609 - L1ME2 LINE L1 -253 5911 5772 424 339 53 21 chr2 70574392 70574581 -180113273 + L1ME3A LINE L1 5762 5956 -214 29 70 0 0 chr2 70574782 70574839 -180113015 + AT_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr2 70576115 70576137 -180111717 + AT_rich Low_complexity Low_complexity 1 22 0 447 206 9 75 chr2 70576640 70576747 -180111107 + FLAM_A SINE Alu 1 100 -42 474 351 25 8 chr2 70577277 70577515 -180110339 - MIR SINE MIR -14 248 10 701 273 47 29 chr2 70578446 70578790 -180109064 - L1MC4 LINE L1 0 8042 7693 1977 71 4 12 chr2 70579864 70580117 -180107737 - AluY SINE Alu -19 292 42 729 207 50 0 chr2 70580129 70580269 -180107585 - FRAM SINE Alu -24 152 6 342 200 74 104 chr2 70580769 70580904 -180106950 - L1ME3A LINE L1 -34 6136 6006 379 325 60 6 chr2 70583857 70584023 -180103831 + MIR3 SINE MIR 30 204 -4 201 310 95 0 chr2 70584328 70584444 -180103410 - MIR SINE MIR -2 260 134 455 286 106 23 chr2 70584871 70585088 -180102766 - MIR SINE MIR -8 254 20 450 323 30 53 chr2 70585696 70585962 -180101892 - L3b LINE CR1 -119 1464 1205 1021 177 17 0 chr2 70585975 70586156 -180101698 + MER5A DNA MER1_type 1 184 -5 200 195 0 0 chr2 70586255 70586296 -180101558 + (TATG)n Simple_repeat Simple_repeat 2 42 0 377 138 12 0 chr2 70586825 70586905 -180100949 - L1MA9 LINE L1 -7 6305 6225 299 320 20 0 chr2 70587029 70587129 -180100725 + L2 LINE L2 3212 3313 0 758 258 83 31 chr2 70587780 70588009 -180099845 - MIR SINE MIR -2 260 20 1594 188 3 17 chr2 70591021 70591314 -180096540 + AluJb SINE Alu 1 289 -23 533 281 105 24 chr2 70592694 70593093 -180094761 + LTR33A LTR ERVL 4 506 -17 181 214 0 29 chr2 70595172 70595242 -180092612 + CT-rich Low_complexity Low_complexity 1 68 0 2258 102 0 3 chr2 70595917 70596220 -180091634 - AluSx SINE Alu -8 304 3 27 29 0 0 chr2 70598850 70598884 -180088970 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr2 70602448 70602477 -180085377 + AT_rich Low_complexity Low_complexity 1 29 0 219 139 0 0 chr2 70606920 70606956 -180080898 + (GAA)n Simple_repeat Simple_repeat 2 37 0 330 87 0 0 chr2 70610734 70610780 -180077074 + (TTTTC)n Simple_repeat Simple_repeat 5 50 0 23 0 0 0 chr2 70610848 70610871 -180076983 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 70611354 70611375 -180076479 + AT_rich Low_complexity Low_complexity 1 21 0 296 312 112 39 chr2 70613830 70614035 -180073819 - MIR SINE MIR -12 250 31 562 298 40 37 chr2 70614391 70614566 -180073288 + MIR SINE MIR 1 175 -62 320 407 50 29 chr2 70614855 70615135 -180072719 + L2 LINE L2 2905 3190 -82 650 289 64 10 chr2 70615569 70615773 -180072081 + MIR SINE MIR 1 215 -47 193 282 28 0 chr2 70615776 70615847 -180072007 + MIR SINE MIR 190 262 0 676 319 17 17 chr2 70616104 70616336 -180071518 + MIR SINE MIR 31 262 0 546 274 65 88 chr2 70616640 70617038 -180070816 - L1ME3A LINE L1 -219 5951 5563 1378 207 88 95 chr2 70617107 70617653 -180070201 + MLT1F LTR MaLR 1 542 0 246 269 140 27 chr2 70617969 70618155 -180069699 + L1ME4a LINE L1 5716 5922 -199 1309 157 0 27 chr2 70618531 70618754 -180069100 - Tigger3(Golem) DNA MER2_type -23 3006 2790 562 221 16 33 chr2 70618811 70618933 -180068921 - Tigger3(Golem) DNA MER2_type -2908 121 2 287 358 108 11 chr2 70619470 70619646 -180068208 + L2 LINE L2 3078 3270 -2 720 299 60 0 chr2 70620731 70620932 -180066922 + MIR SINE MIR 37 249 -13 1445 195 33 20 chr2 70621262 70621565 -180066289 - AluJo SINE Alu -5 307 1 614 357 49 29 chr2 70622405 70622755 -180065099 + L2 LINE L2 2915 3271 -1 425 281 16 65 chr2 70623159 70623344 -180064510 - MIR SINE MIR -16 246 71 310 314 48 0 chr2 70623382 70623487 -180064367 + L3 LINE CR1 1022 1131 -446 2460 70 0 3 chr2 70623591 70623892 -180063962 + AluY SINE Alu 1 300 -11 1489 190 108 6 chr2 70624337 70624679 -180063175 + MLT2C1 LTR ERVL 1 377 -20 261 197 0 0 chr2 70624690 70624751 -180063103 + (TA)n Simple_repeat Simple_repeat 2 62 0 309 179 0 0 chr2 70624771 70624827 -180063027 + MLT2C1 LTR ERVL 465 520 0 369 207 98 0 chr2 70625961 70626043 -180061811 + MER5A DNA MER1_type 100 189 0 351 44 0 0 chr2 70626147 70626192 -180061662 + (TG)n Simple_repeat Simple_repeat 2 46 0 185 280 108 0 chr2 70626472 70626565 -180061289 + MIR SINE MIR 18 120 -88 820 166 104 18 chr2 70627849 70628012 -180059842 - MER45A DNA AcHobo 0 178 2 7861 12 0 0 chr2 70628668 70629850 -180058004 - L1PA2 LINE L1 -5 6150 4969 2767 18 0 0 chr2 70629850 70630176 -180057678 + L1P LINE L1 2331 2656 -3490 698 222 0 0 chr2 70630974 70631100 -180056754 - FLAM_A SINE Alu -7 126 1 189 94 0 0 chr2 70631377 70631409 -180056445 + (TG)n Simple_repeat Simple_repeat 2 33 0 12435 120 82 1 chr2 70631516 70633436 -180054418 + Tigger1 DNA MER2_type 1 2076 -342 452 164 0 0 chr2 70633415 70633488 -180054366 + Tigger1 DNA MER2_type 2345 2417 -1 * 4411 165 35 29 chr2 70633491 70634351 -180053503 + MER6 DNA MER2_type 1 865 0 406 317 77 27 chr2 70634830 70635013 -180052841 + MIR SINE MIR 20 211 -51 212 263 40 0 chr2 70635578 70635654 -180052200 + CT-rich Low_complexity Low_complexity 2 80 0 342 107 0 0 chr2 70635815 70635871 -180051983 + (TG)n Simple_repeat Simple_repeat 2 57 0 330 341 101 23 chr2 70636285 70636502 -180051352 + MIR SINE MIR 15 248 -14 261 234 72 72 chr2 70636589 70636798 -180051056 - MLT1L LTR MaLR -37 578 370 188 231 0 0 chr2 70637433 70637472 -180050382 - MIR SINE MIR -115 93 55 1805 151 7 4 chr2 70637600 70637929 -180049925 + AluSx SINE Alu 3 332 0 303 275 8 33 chr2 70638049 70638169 -180049685 + L1MC/D LINE L1 5683 5799 -2009 399 41 0 0 chr2 70638270 70638319 -180049535 + (TG)n Simple_repeat Simple_repeat 2 50 0 336 355 97 7 chr2 70638484 70638639 -180049215 + MIR SINE MIR 19 187 -75 355 309 55 98 chr2 70639001 70639380 -180048474 + L2 LINE L2 2909 3271 -1 218 265 44 0 chr2 70639498 70639566 -180048288 + L2 LINE L2 3196 3266 -6 383 268 188 1 chr2 70640497 70640670 -180047184 + MIR SINE MIR 2 202 -60 496 285 47 17 chr2 70641459 70641631 -180046223 - MIR3 SINE MIR -8 200 24 788 204 0 58 chr2 70641836 70642027 -180045827 + MER20B DNA MER1_type 1 180 -39 1928 110 66 0 chr2 70642031 70642348 -180045506 + L1MA6 LINE L1 5963 6300 0 33 0 0 0 chr2 70642348 70642381 -180045473 + AT_rich Low_complexity Low_complexity 1 33 0 303 121 0 52 chr2 70642392 70642450 -180045404 + MER20B DNA MER1_type 164 218 -1 349 229 245 10 chr2 70642451 70642643 -180045211 - MER20B DNA MER1_type -1 782 546 445 268 33 13 chr2 70642816 70643081 -180044773 - MER20B DNA MER1_type -467 316 1 27 29 0 0 chr2 70643410 70643444 -180044410 + AT_rich Low_complexity Low_complexity 1 34 0 502 270 122 72 chr2 70644538 70645012 -180042842 + MLT1J LTR MaLR 1 498 -13 205 277 71 89 chr2 70645087 70645199 -180042655 - L2 LINE L2 -4 3309 3200 630 201 35 0 chr2 70645306 70645450 -180042404 - L1MA10 LINE L1 -10 6324 6176 325 212 10 81 chr2 70645470 70645569 -180042285 - L1MB8 LINE L1 -169 6009 5918 677 189 16 52 chr2 70646129 70646320 -180041534 - MER53 DNA DNA 0 189 6 1191 98 0 18 chr2 70648167 70648352 -180039502 - AluSq SINE Alu 0 305 124 228 67 0 0 chr2 70648476 70648506 -180039348 + (CTG)n Simple_repeat Simple_repeat 1 30 0 213 285 252 0 chr2 70649199 70649322 -180038532 - MIR SINE MIR -60 202 49 1666 51 4 68 chr2 70651101 70651338 -180036516 + AluY SINE Alu 79 300 -11 4850 154 102 11 chr2 70651349 70653336 -180034518 + L1MA7 LINE L1 4104 6285 -6 26 30 0 0 chr2 70653380 70653413 -180034441 + AT_rich Low_complexity Low_complexity 1 33 0 310 153 66 15 chr2 70653517 70653654 -180034200 + (TA)n Simple_repeat Simple_repeat 2 145 0 1172 177 229 0 chr2 70653735 70654006 -180033848 + MER7A DNA MER2_type 2 332 -14 23 54 0 0 chr2 70654483 70654520 -180033334 + AT_rich Low_complexity Low_complexity 1 37 0 33 0 0 0 chr2 70654933 70654966 -180032888 + AT_rich Low_complexity Low_complexity 1 33 0 439 329 27 0 chr2 70655410 70655559 -180032295 - LTR16A LTR ERVL -282 168 16 730 188 35 12 chr2 70655852 70656081 -180031773 + L1ME2 LINE L1 5186 5417 -747 2421 103 14 0 chr2 70656081 70656432 -180031422 - MER1A DNA MER1_type 0 529 174 1734 234 117 34 chr2 70656457 70657140 -180030714 + L1ME2 LINE L1 5410 6149 -15 363 23 0 0 chr2 70657147 70657191 -180030663 + (CA)n Simple_repeat Simple_repeat 2 45 0 301 280 101 42 chr2 70657550 70657739 -180030115 + L1ME LINE L1 3985 4184 -1962 389 254 46 15 chr2 70658290 70658420 -180029434 + L1ME LINE L1 5532 5665 -456 974 58 0 0 chr2 70658422 70658542 -180029312 + AluY SINE Alu 177 296 -15 22 80 0 0 chr2 70659327 70659377 -180028477 + AT_rich Low_complexity Low_complexity 1 50 0 699 104 0 0 chr2 70659954 70660060 -180027794 + (GGAA)n Simple_repeat Simple_repeat 2 107 0 2234 119 0 0 chr2 70664956 70665250 -180022604 - AluSx SINE Alu -18 294 1 446 327 25 6 chr2 70665266 70665425 -180022429 - MIR SINE MIR -73 189 28 365 335 86 43 chr2 70665451 70665941 -180021913 + L2 LINE L2 2673 3171 -101 887 300 89 32 chr2 70666022 70666530 -180021324 + L2 LINE L2 2724 3257 -56 209 239 0 33 chr2 70667740 70667832 -180020022 + CT-rich Low_complexity Low_complexity 3 91 0 1042 252 68 7 chr2 70669739 70670033 -180017821 + MLT1I LTR MaLR 98 409 0 460 314 83 42 chr2 70671144 70671408 -180016446 - L3 LINE CR1 -19 1558 1284 724 236 20 44 chr2 70671450 70671653 -180016201 + MER20 DNA MER1_type 22 219 0 435 306 136 27 chr2 70671657 70671915 -180015939 - L3 LINE CR1 -284 1293 1008 583 300 61 36 chr2 70672054 70672301 -180015553 - MIR SINE MIR 0 262 10 24 0 0 0 chr2 70673779 70673803 -180014051 + AT_rich Low_complexity Low_complexity 1 24 0 2295 66 0 27 chr2 70673812 70674113 -180013741 + AluY SINE Alu 1 293 -18 210 305 67 99 chr2 70674184 70674407 -180013447 + L2 LINE L2 3025 3240 -32 257 0 30 0 chr2 70674427 70674460 -180013394 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 250 243 9 103 chr2 70674857 70674964 -180012890 - L2 LINE L2 -628 2686 2590 624 217 118 0 chr2 70675246 70675398 -180012456 + FRAM SINE Alu 1 167 -9 294 240 53 13 chr2 70676148 70676223 -180011631 - L2 LINE L2 -14 3299 3222 202 293 0 0 chr2 70676282 70676323 -180011531 + L2 LINE L2 3143 3183 -89 241 333 178 0 chr2 70676463 70676598 -180011256 + MIR SINE MIR 54 212 -50 801 186 0 18 chr2 70676888 70677055 -180010799 + MER3 DNA MER1_type 41 204 -5 235 257 0 54 chr2 70677264 70677338 -180010516 + MIR SINE MIR 78 147 -115 20965 103 9 14 chr2 70677339 70681049 -180006805 + L1P3 LINE L1 748 4456 -2005 236 118 0 0 chr2 70682053 70682087 -180005767 + U2 snRNA snRNA 2 35 -153 376 347 20 7 chr2 70683659 70683809 -180004045 - MIR3 SINE MIR -43 165 14 753 272 58 0 chr2 70684787 70684993 -180002861 + MIR SINE MIR 31 248 -14 621 163 181 6 chr2 70687361 70687521 -180000333 - MER20 DNA MER1_type -3 216 29 396 271 160 44 chr2 70687735 70687916 -179999938 - MIR SINE MIR -13 249 48 1040 182 34 19 chr2 70687951 70688220 -179999634 + MER33 DNA MER1_type 11 283 -41 1530 188 46 11 chr2 70688222 70688504 -179999350 + AluJo SINE Alu 6 297 -15 475 262 16 0 chr2 70689259 70689381 -179998473 + MIR SINE MIR 131 254 -8 22 56 0 0 chr2 70691270 70691306 -179996548 + AT_rich Low_complexity Low_complexity 1 36 0 192 77 0 0 chr2 70692038 70692064 -179995790 + (T)n Simple_repeat Simple_repeat 1 26 0 180 0 0 0 chr2 70692844 70692864 -179994990 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 515 281 111 7 chr2 70695275 70695428 -179992426 - MIR SINE MIR -62 200 32 419 226 20 181 chr2 70696991 70697303 -179990551 - L2 LINE L2 -6 3307 3075 1864 191 0 0 chr2 70697303 70697602 -179990252 + AluJb SINE Alu 1 299 -13 419 226 20 181 chr2 70697602 70697697 -179990157 - L2 LINE L2 -238 3075 2966 188 350 50 50 chr2 70698287 70698447 -179989407 + MIR SINE MIR 99 258 -4 2936 121 41 19 chr2 70698613 70699127 -179988727 + L1MA3 LINE L1 5781 6305 0 629 239 57 6 chr2 70699292 70699468 -179988386 - MIR SINE MIR -15 247 63 181 284 20 0 chr2 70699524 70699626 -179988228 + CT-rich Low_complexity Low_complexity 2 105 0 362 261 239 0 chr2 70701914 70702052 -179985802 - MIR SINE MIR -6 256 86 500 340 16 5 chr2 70702386 70702574 -179985280 + MIR3 SINE MIR 19 208 0 406 273 85 30 chr2 70702644 70702809 -179985045 - MIR SINE MIR -44 218 45 198 0 0 0 chr2 70703843 70703865 -179983989 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 456 265 85 81 chr2 70704305 70704392 -179983462 - MIR SINE MIR -26 236 151 1887 128 49 35 chr2 70704392 70704760 -179983094 - THE1C LTR MaLR 0 375 3 456 265 85 81 chr2 70704760 70704895 -179982959 - MIR SINE MIR -111 151 13 388 317 135 10 chr2 70705658 70705866 -179981988 + MIR SINE MIR 23 256 -6 335 220 155 18 chr2 70706330 70706498 -179981356 - MLT1K LTR MaLR -17 571 381 641 271 27 44 chr2 70707859 70708084 -179979770 + MER58A DNA MER1_type 1 221 -3 26 0 0 0 chr2 70708675 70708701 -179979153 + AT_rich Low_complexity Low_complexity 1 26 0 2136 105 34 3 chr2 70708918 70709214 -179978640 - AluSg SINE Alu -5 305 1 249 304 0 0 chr2 70709406 70709485 -179978369 + GA-rich Low_complexity Low_complexity 2 80 0 260 311 121 23 chr2 70709600 70709732 -179978122 + MIR SINE MIR 48 192 -70 596 238 55 29 chr2 70710014 70710230 -179977624 + MIR SINE MIR 24 246 -16 566 260 82 48 chr2 70711397 70711628 -179976226 + MIR SINE MIR 16 254 -8 734 78 9 0 chr2 70712196 70712311 -179975543 + (TAGA)n Simple_repeat Simple_repeat 4 119 0 590 296 56 34 chr2 70712453 70712686 -179975168 + MIR SINE MIR 12 249 -13 257 157 9 148 chr2 70713242 70713357 -179974497 - L1MA9 LINE L1 -40 6272 6174 232 365 169 23 chr2 70713368 70713675 -179974179 - L2 LINE L2 -477 2837 2486 2058 112 3 23 chr2 70714496 70714801 -179973053 + AluSc SINE Alu 1 299 -10 231 133 0 0 chr2 70716154 70716199 -179971655 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 264 59 0 0 chr2 70716400 70716434 -179971420 + (T)n Simple_repeat Simple_repeat 1 34 0 2089 112 16 16 chr2 70716471 70716794 -179971060 + L1PA15 LINE L1 5837 6159 -6 642 239 181 13 chr2 70716812 70717050 -179970804 + LTR50 LTR ERVL 21 298 -497 182 232 116 43 chr2 70718117 70718186 -179969668 - MER5B DNA MER1_type -77 101 28 27 0 0 0 chr2 70718560 70718587 -179969267 + AT_rich Low_complexity Low_complexity 1 27 0 1043 95 0 0 chr2 70719367 70719515 -179968339 + L1MA1 LINE L1 6154 6301 -1 264 250 16 0 chr2 70719729 70719793 -179968061 - Charlie8 DNA MER1_type -993 1424 1360 475 296 6 24 chr2 70719996 70720165 -179967689 - Charlie8 DNA MER1_type -2156 261 96 339 284 7 54 chr2 70720423 70720571 -179967283 + L1ME2 LINE L1 5260 5400 -2408 24 53 0 0 chr2 70720587 70720625 -179967229 + AT_rich Low_complexity Low_complexity 1 38 0 248 204 56 0 chr2 70720639 70720747 -179967107 + (TA)n Simple_repeat Simple_repeat 1 114 0 1747 122 7 0 chr2 70720747 70721025 -179966829 - MSTA-int LTR MaLR -1298 282 3 2081 157 116 13 chr2 70721027 70721415 -179966439 - MSTA LTR MaLR 0 428 1 23 0 0 0 chr2 70721609 70721632 -179966222 + AT_rich Low_complexity Low_complexity 1 23 0 753 285 29 12 chr2 70722294 70722540 -179965314 + L1MDa LINE L1 2 251 -6289 * 1831 237 42 24 chr2 70722535 70723130 -179964724 + L1ME2 LINE L1 5548 6153 -11 361 274 94 55 chr2 70723173 70723374 -179964480 + L1MC4 LINE L1 7829 8037 -5 632 216 103 45 chr2 70723389 70723854 -179964000 - L1M4 LINE L1 -1296 4850 4324 * 4058 166 48 26 chr2 70723850 70724734 -179963120 + L1MC3 LINE L1 6744 7646 -139 2034 299 56 11 chr2 70724757 70725797 -179962057 - L1M4 LINE L1 -1836 4310 3225 184 145 36 145 chr2 70726303 70726386 -179961468 + MIR3 SINE MIR 119 192 -16 580 188 7 7 chr2 70728623 70728767 -179959087 + CT-rich Low_complexity Low_complexity 2 145 0 2097 131 6 26 chr2 70728767 70729080 -179958774 - AluSx SINE Alu -5 307 1 1494 218 56 36 chr2 70729290 70729736 -179958118 - MLT1C LTR MaLR -12 455 1 189 0 0 0 chr2 70730341 70730362 -179957492 + (T)n Simple_repeat Simple_repeat 1 21 0 2437 76 3 0 chr2 70732618 70732919 -179954935 - AluSc SINE Alu -7 302 1 2414 69 0 0 chr2 70733649 70733938 -179953916 - AluY SINE Alu -20 291 3 188 98 0 24 chr2 70734105 70734146 -179953708 + (TTTTTG)n Simple_repeat Simple_repeat 4 43 0 601 278 73 8 chr2 70735371 70735616 -179952238 + MIR SINE MIR 2 262 0 325 160 20 100 chr2 70735620 70735655 -179952199 + MIR SINE MIR 124 160 -102 1645 180 21 3 chr2 70735655 70735939 -179951915 - AluJb SINE Alu -23 289 1 325 160 20 100 chr2 70735939 70736003 -179951851 + MIR SINE MIR 160 215 -47 5369 93 23 57 chr2 70736343 70737263 -179950591 + L1PA12 LINE L1 5280 6168 0 671 205 36 44 chr2 70737558 70737807 -179950047 + L1MC5 LINE L1 7529 7775 -186 186 274 161 0 chr2 70738151 70738213 -179949641 - MIR SINE MIR -71 191 120 8992 29 0 0 chr2 70738219 70739335 -179948519 - L1PA3 LINE L1 -886 5260 4145 7486 28 1 1 chr2 70739335 70740279 -179947575 + L1PA3 LINE L1 5228 6171 0 523 240 249 9 chr2 70740355 70740576 -179947278 + ORSL DNA AcHobo 1 274 -1 554 161 9 62 chr2 70740714 70740826 -179947028 - FLAM_A SINE Alu -36 106 1 258 32 0 0 chr2 70741585 70741616 -179946238 + (CA)n Simple_repeat Simple_repeat 1 31 0 408 97 0 0 chr2 70742258 70742320 -179945534 + (CA)n Simple_repeat Simple_repeat 1 62 0 273 29 0 0 chr2 70743604 70743638 -179944216 + (TG)n Simple_repeat Simple_repeat 1 34 0 186 133 0 0 chr2 70744146 70744176 -179943678 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1380 237 78 34 chr2 70746047 70746571 -179941283 + MLT1H LTR MaLR 3 549 0 742 273 101 46 chr2 70746688 70747014 -179940840 - L2 LINE L2 -2 3311 2968 2025 97 0 13 chr2 70747333 70747633 -179940221 + L1PA13 LINE L1 5867 6162 -1 3133 64 94 5 chr2 70747779 70748217 -179939637 + L1PA8 LINE L1 5686 6162 -10 950 265 44 25 chr2 70748505 70748822 -179939032 + MLT1J1 LTR MaLR 1 323 -123 287 275 145 22 chr2 70749231 70749369 -179938485 + MIR3 SINE MIR 39 193 -15 358 337 105 35 chr2 70749548 70749720 -179938134 - MIR3 SINE MIR -3 205 22 247 247 25 12 chr2 70750460 70750541 -179937313 - MER94 DNA DNA 0 134 53 1573 157 34 0 chr2 70750546 70750839 -179937015 - L1MC1 LINE L1 -31 6302 6000 2505 160 124 19 chr2 70750843 70751374 -179936480 - L1MCa LINE L1 -5811 615 29 212 303 48 69 chr2 70751406 70751551 -179936303 + MIR3 SINE MIR 15 156 -52 309 264 25 66 chr2 70751665 70751786 -179936068 + MIR SINE MIR 97 212 -50 2364 64 0 3 chr2 70752479 70752775 -179935079 + AluY SINE Alu 1 295 -16 2263 159 54 7 chr2 70756009 70756418 -179931436 + MSTA LTR MaLR 1 428 0 816 229 26 0 chr2 70757274 70757466 -179930388 - MER105 DNA DNA -7 197 1 1800 131 24 110 chr2 70758061 70758442 -179929412 + Tigger3(Golem) DNA MER2_type 1 3028 -1 1107 249 41 77 chr2 70758460 70759022 -179928832 + MER34 LTR ERV1 1 542 0 28 29 0 0 chr2 70759316 70759351 -179928503 + AT_rich Low_complexity Low_complexity 1 35 0 358 236 32 0 chr2 70759561 70759671 -179928183 - HsTC2 DNA Tc2 -2 1896 66 324 242 38 49 chr2 70760089 70760211 -179927643 - MIR SINE MIR -62 146 33 335 221 8 0 chr2 70760529 70760651 -179927203 + (TA)n Simple_repeat Simple_repeat 1 123 0 312 303 22 0 chr2 70760651 70760740 -179927114 + L1MC4 LINE L1 6613 6703 -1339 301 316 0 11 chr2 70760738 70760833 -179927021 - L1MC4 LINE L1 -1339 6703 6610 * 340 281 22 0 chr2 70760771 70760860 -179926994 + L1MC4 LINE L1 6613 6703 -1339 340 281 22 0 chr2 70760861 70760950 -179926904 + L1MC4 LINE L1 6613 6703 -1339 300 280 43 11 chr2 70760920 70761013 -179926841 - L1MC4 LINE L1 -1337 6705 6610 * 1014 142 0 0 chr2 70761013 70761232 -179926622 + (TA)n Simple_repeat Simple_repeat 1 219 0 1359 67 0 0 chr2 70762606 70762785 -179925069 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 240 304 13 13 chr2 70765112 70765191 -179922663 + MLT1I LTR MaLR 246 324 -85 893 207 145 17 chr2 70765361 70765786 -179922068 - MLT1E1 LTR MaLR -35 619 75 378 0 0 0 chr2 70767412 70767454 -179920400 + (CA)n Simple_repeat Simple_repeat 2 43 0 234 0 0 0 chr2 70767965 70767991 -179919863 + (TG)n Simple_repeat Simple_repeat 2 27 0 411 118 12 71 chr2 70768511 70768596 -179919258 - MADE1 DNA Mariner 0 80 1 26 30 0 0 chr2 70768939 70768972 -179918882 + AT_rich Low_complexity Low_complexity 1 33 0 550 288 44 39 chr2 70769201 70769406 -179918448 - MIR SINE MIR -39 223 18 286 371 109 36 chr2 70769546 70769875 -179917979 + L2 LINE L2 2920 3272 0 465 19 0 0 chr2 70770316 70770370 -179917484 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 190 321 220 18 chr2 70770503 70770612 -179917242 - MIR SINE MIR -84 178 48 654 276 116 16 chr2 70770668 70770918 -179916936 + L2 LINE L2 2490 2764 -550 515 273 126 76 chr2 70770938 70771294 -179916560 + L2 LINE L2 2939 3312 -1 1856 189 22 66 chr2 70772274 70772473 -179915381 - MLT1C LTR MaLR 0 467 261 2079 128 133 18 chr2 70772473 70772857 -179914997 - MSTA LTR MaLR 0 428 1 1856 189 22 66 chr2 70772857 70773145 -179914709 - MLT1C LTR MaLR -206 261 1 465 301 0 0 chr2 70773249 70773422 -179914432 + (TA)n Simple_repeat Simple_repeat 2 174 0 325 198 55 33 chr2 70773440 70773531 -179914323 - L1MC4 LINE L1 -1339 6703 6611 282 324 15 44 chr2 70774287 70774423 -179913431 + MIR SINE MIR 61 192 -70 5068 137 53 19 chr2 70775329 70776329 -179911525 - Tigger3b DNA MER2_type 0 1231 198 317 253 0 0 chr2 70776433 70776512 -179911342 - L1MC4 LINE L1 -1 8041 7963 22 0 0 0 chr2 70776522 70776544 -179911310 + AT_rich Low_complexity Low_complexity 1 22 0 4660 158 21 11 chr2 70776553 70777459 -179910395 - L1MA4 LINE L1 -1 6299 5385 6041 110 6 1 chr2 70777459 70779169 -179908685 - L1PA10 LINE L1 -1 6167 4459 1117 213 0 0 chr2 70779205 70779412 -179908442 - Tigger3b DNA MER2_type -1024 207 1 425 289 39 0 chr2 70779692 70779820 -179908034 + MIR SINE MIR 57 189 -73 320 281 18 26 chr2 70779966 70780080 -179907774 + MER5B DNA MER1_type 2 114 -64 207 0 0 0 chr2 70780573 70780596 -179907258 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 297 219 15 109 chr2 70781196 70781333 -179906521 + MLT1H LTR MaLR 425 548 -1 25 65 0 0 chr2 70781354 70781400 -179906454 + AT_rich Low_complexity Low_complexity 1 46 0 579 261 35 39 chr2 70781693 70781896 -179905958 - MIR SINE MIR -48 214 13 205 324 63 18 chr2 70782075 70782186 -179905668 - L2 LINE L2 -8 3264 3149 325 329 110 0 chr2 70783196 70783360 -179904494 + MIR SINE MIR 80 261 -1 227 170 0 21 chr2 70784424 70784471 -179903383 + LTR67 LTR ERVL 509 554 -3 1102 293 35 26 chr2 70784773 70785353 -179902501 + L1ME3 LINE L1 5364 5948 -214 21 0 0 0 chr2 70786926 70786947 -179900907 + AT_rich Low_complexity Low_complexity 1 21 0 949 291 41 28 chr2 70786963 70787352 -179900502 - MLT1I LTR MaLR 0 409 16 827 277 9 9 chr2 70788388 70788612 -179899242 - MER58A DNA MER1_type 0 224 1 282 260 104 0 chr2 70789292 70789369 -179898485 + MER103 DNA DNA 44 128 -38 774 194 6 17 chr2 70789373 70789548 -179898306 + MER104 DNA MER2_type 5 177 -3 2154 113 0 23 chr2 70790035 70790335 -179897519 + AluSx SINE Alu 1 293 -19 2231 116 47 14 chr2 70790856 70791218 -179896636 - THE1C LTR MaLR 0 375 2 446 292 67 43 chr2 70792157 70792366 -179895488 - MER115 DNA AcHobo -455 238 25 222 91 0 0 chr2 70792460 70792493 -179895361 + (TC)n Simple_repeat Simple_repeat 2 34 0 383 250 211 16 chr2 70793760 70793888 -179893966 + MER5A DNA MER1_type 9 161 -28 570 221 45 39 chr2 70794287 70794441 -179893413 + L2 LINE L2 3159 3313 0 23 86 0 0 chr2 70794480 70794538 -179893316 + AT_rich Low_complexity Low_complexity 1 58 0 2722 202 48 119 chr2 70794659 70795717 -179892137 + L1MB7 LINE L1 3561 4543 -1603 406 188 0 0 chr2 70795717 70795786 -179892068 + Tigger2 DNA MER2_type 1 69 -2649 2487 123 45 19 chr2 70795795 70796219 -179891635 + Tigger2 DNA MER2_type 2284 2718 0 2054 93 4 4 chr2 70796240 70796674 -179891180 + AluY SINE Alu 1 434 0 4360 189 36 15 chr2 70796674 70798198 -179889656 + L1MB7 LINE L1 4628 6184 0 438 200 160 0 chr2 70798198 70798323 -179889531 + Charlie2 DNA MER1_type 178 322 -2460 2194 217 92 14 chr2 70798324 70799034 -179888820 + Charlie2 DNA MER1_type 1856 2620 -242 401 315 25 25 chr2 70799179 70799376 -179888478 - LTR16C LTR ERVL -39 452 256 261 204 23 91 chr2 70799670 70799750 -179888104 - L1MC5 LINE L1 -143 7818 7749 244 0 56 0 chr2 70799750 70799786 -179888068 + (TA)n Simple_repeat Simple_repeat 1 38 0 261 204 23 91 chr2 70799786 70799837 -179888017 - L1MC5 LINE L1 -212 7749 7696 30 27 0 0 chr2 70799896 70799933 -179887921 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr2 70800342 70800372 -179887482 + AT_rich Low_complexity Low_complexity 1 30 0 6435 122 20 5 chr2 70803132 70804229 -179883625 - L1MA5A LINE L1 0 6297 5183 1212 210 55 13 chr2 70804948 70805049 -179882805 - MER33 DNA MER1_type -2261 324 229 243 114 0 0 chr2 70805049 70805093 -179882761 + (TA)n Simple_repeat Simple_repeat 2 45 0 1212 210 55 13 chr2 70805093 70805301 -179882553 - MER33 DNA MER1_type -2356 229 2 192 347 0 0 chr2 70807345 70807394 -179880460 + L2 LINE L2 3222 3270 -2 186 324 59 0 chr2 70859741 70859809 -179828045 - MIR SINE MIR -116 92 21 218 310 58 0 chr2 70862011 70862098 -179825756 + MIR3 SINE MIR 108 199 -9 329 278 28 19 chr2 70864655 70864763 -179823091 + MER81 DNA DNA 5 113 -1 1773 107 70 0 chr2 70864789 70865031 -179822823 - AluSx SINE Alu -37 275 17 307 335 80 44 chr2 70865081 70865332 -179822522 + L2 LINE L2 1815 2074 -1240 1779 142 14 28 chr2 70865948 70866237 -179821617 - AluSx SINE Alu -1 311 27 330 282 57 24 chr2 70866692 70866816 -179821038 - MIR SINE MIR -114 148 21 202 170 21 43 chr2 70866905 70866952 -179820902 + L2 LINE L2 3226 3271 -1 3005 211 59 31 chr2 70866999 70868467 -179819387 - L1ME1 LINE L1 -5 6161 4656 22126 29 0 0 chr2 70868486 70871933 -179815921 - L1PA4 LINE L1 -3 6152 2707 474 195 0 0 chr2 70872061 70872148 -179815706 - L1ME1 LINE L1 -1989 4157 4071 375 60 0 0 chr2 70872751 70872801 -179815053 + (CA)n Simple_repeat Simple_repeat 1 50 0 457 269 21 14 chr2 70873370 70873511 -179814343 - L2 LINE L2 -609 2705 2564 258 32 0 0 chr2 70873538 70873569 -179814285 + (TC)n Simple_repeat Simple_repeat 2 32 0 396 280 8 8 chr2 70873569 70873694 -179814160 + HsTC2 DNA Tc2 29 153 -1745 256 190 17 0 chr2 70873712 70873770 -179814084 - HsTC2 DNA Tc2 -1189 709 651 873 238 82 12 chr2 70873778 70874118 -179813736 + HsTC2 DNA Tc2 1533 1896 -2 1020 229 73 41 chr2 70874123 70874307 -179813547 - L2 LINE L2 -804 2510 2309 1585 193 60 58 chr2 70874307 70874773 -179813081 - MLT1C LTR MaLR 0 467 1 1020 229 73 41 chr2 70874773 70874928 -179812926 - L2 LINE L2 -1005 2309 2160 193 339 42 71 chr2 70875351 70875519 -179812335 - MIR3 SINE MIR -25 183 21 231 88 0 0 chr2 70876033 70876067 -179811787 + (TC)n Simple_repeat Simple_repeat 1 34 0 312 27 0 0 chr2 70876067 70876104 -179811750 + (TG)n Simple_repeat Simple_repeat 2 38 0 459 319 51 32 chr2 70876168 70876384 -179811470 + MIR SINE MIR 31 250 -12 1795 130 11 8 chr2 70877187 70877449 -179810405 + AluSx SINE Alu 44 306 -6 197 214 67 56 chr2 70877683 70877772 -179810082 + L3 LINE CR1 807 896 -681 2027 147 126 8 chr2 70878622 70879003 -179808851 + MSTA LTR MaLR 3 428 0 286 137 0 20 chr2 70880011 70880062 -179807792 + MIR SINE MIR 83 132 -76 407 264 54 0 chr2 70881469 70881598 -179806256 - MIR SINE MIR -3 259 124 370 301 27 14 chr2 70881851 70881997 -179805857 + (TATG)n Simple_repeat Simple_repeat 1 148 0 196 327 87 0 chr2 70883033 70883137 -179804717 - MIR SINE MIR -50 212 100 402 276 94 8 chr2 70883413 70883540 -179804314 - L2 LINE L2 -5 3308 3171 338 271 9 19 chr2 70883579 70883686 -179804168 - MLT1E LTR MaLR -474 119 14 835 246 136 35 chr2 70886016 70886505 -179801349 + MLT1E LTR MaLR 11 567 0 1568 180 0 82 chr2 70887672 70888012 -179799842 - AluJb SINE Alu 0 315 1 219 323 60 72 chr2 70888791 70888958 -179798896 + L2 LINE L2 2872 3036 -277 213 381 0 12 chr2 70889008 70889092 -179798762 + MIR SINE MIR 43 125 -137 583 270 59 7 chr2 70889876 70890028 -179797826 - MER5B DNA MER1_type -17 161 2 614 309 55 99 chr2 70892245 70892337 -179795517 - L2 LINE L2 -2 3270 3175 1823 155 4 11 chr2 70892337 70892614 -179795240 + AluSx SINE Alu 1 275 -37 441 0 0 0 chr2 70892617 70892666 -179795188 + (TAAAA)n Simple_repeat Simple_repeat 1 49 0 614 309 55 99 chr2 70892666 70893429 -179794425 - L2 LINE L2 -99 3173 2440 286 293 80 48 chr2 70893820 70894008 -179793846 + L2 LINE L2 3110 3303 -10 181 306 0 0 chr2 70894113 70894162 -179793692 + L2 LINE L2 3265 3313 0 404 214 113 88 chr2 70896442 70896527 -179791327 + MIR SINE MIR 59 151 -111 1974 162 17 11 chr2 70896527 70896879 -179790975 + THE1A LTR MaLR 2 355 0 404 214 113 88 chr2 70896879 70896952 -179790902 + MIR SINE MIR 151 221 -41 335 299 160 1 chr2 70897008 70897172 -179790682 + MIR3 SINE MIR 2 194 -14 246 305 0 0 chr2 70898007 70898066 -179789788 - L2 LINE L2 -4 3268 3210 298 282 12 12 chr2 70898961 70899046 -179788808 - L2 LINE L2 0 3272 3188 510 320 64 5 chr2 70899274 70899490 -179788364 + MIR SINE MIR 17 247 -15 202 342 25 0 chr2 70899995 70900074 -179787780 + MIR SINE MIR 161 241 -21 37 39 0 0 chr2 70901660 70901711 -179786143 + AT_rich Low_complexity Low_complexity 1 51 0 253 200 129 0 chr2 70901781 70901851 -179786003 + MIR SINE MIR 79 157 -105 1288 171 7 33 chr2 70902320 70902594 -179785260 + L1MB3 LINE L1 5909 6175 -8 221 250 0 0 chr2 70904879 70904927 -179782927 + MIR3 SINE MIR 131 178 -30 674 280 33 28 chr2 70905131 70905345 -179782509 + MIR SINE MIR 45 259 -3 252 363 44 0 chr2 70905630 70905743 -179782111 - MIR SINE MIR -66 196 79 256 229 73 73 chr2 70906346 70906455 -179781399 - MIR SINE MIR -6 256 148 344 286 45 15 chr2 70906621 70906754 -179781100 + Charlie8 DNA MER1_type 142 278 -2139 297 290 131 0 chr2 70907045 70907152 -179780702 - L2 LINE L2 -9 3263 3143 641 154 8 0 chr2 70907319 70907436 -179780418 - L1MB4 LINE L1 -1 6179 6062 31 26 0 0 chr2 70907958 70907996 -179779858 + AT_rich Low_complexity Low_complexity 1 38 0 320 299 37 22 chr2 70908014 70908148 -179779706 - MIR SINE MIR 0 262 127 876 115 178 6 chr2 70908155 70908312 -179779542 - MSTA LTR MaLR -244 184 1 887 165 38 0 chr2 70908337 70908495 -179779359 - MER58B DNA MER1_type -1 340 177 191 326 111 35 chr2 70908642 70908786 -179779068 - MIR SINE MIR -71 191 37 348 316 60 80 chr2 70908922 70909324 -179778530 - L2 LINE L2 0 3313 2920 421 306 98 40 chr2 70909546 70909873 -179777981 - L2 LINE L2 -738 2576 2231 275 219 14 55 chr2 70910764 70910837 -179777017 + L2 LINE L2 3244 3313 0 203 326 117 51 chr2 70911365 70911638 -179776216 - L2 LINE L2 -110 3162 2872 203 281 93 36 chr2 70912903 70913042 -179774812 + MER5B DNA MER1_type 18 164 -14 380 308 17 8 chr2 70912906 70913026 -179774828 - MER5A DNA MER1_type -22 167 47 303 312 28 28 chr2 70913183 70913324 -179774530 - L1M4 LINE L1 -3317 2829 2689 22 35 0 0 chr2 70913522 70913551 -179774303 + AT_rich Low_complexity Low_complexity 1 29 0 302 341 44 0 chr2 70913702 70913793 -179774061 + MIR SINE MIR 18 112 -150 21 0 0 0 chr2 70914836 70914857 -179772997 + AT_rich Low_complexity Low_complexity 1 21 0 202 298 202 0 chr2 70915239 70915323 -179772531 - MIR SINE MIR -161 101 1 21 0 0 0 chr2 70915363 70915384 -179772470 + AT_rich Low_complexity Low_complexity 1 21 0 227 232 14 29 chr2 70915764 70915833 -179772021 + MIR SINE MIR 98 165 -97 385 288 39 39 chr2 70915958 70916111 -179771743 - MIR3 SINE MIR -13 195 43 2396 68 3 3 chr2 70916334 70916642 -179771212 + AluY SINE Alu 1 308 -3 203 152 0 0 chr2 70918830 70918863 -179768991 - L2 LINE L2 0 3313 3281 24 0 0 0 chr2 70920122 70920146 -179767708 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 70922229 70922252 -179765602 + AT_rich Low_complexity Low_complexity 1 23 0 800 159 65 0 chr2 70922263 70922433 -179765421 - L1MB4 LINE L1 -5 6175 5995 22 56 0 0 chr2 70926665 70926701 -179761153 + AT_rich Low_complexity Low_complexity 1 36 0 195 209 0 47 chr2 70926956 70926999 -179760855 + MIR SINE MIR 217 257 -5 187 330 44 11 chr2 70927294 70927385 -179760469 + L2 LINE L2 3180 3273 -40 983 210 152 39 chr2 70927387 70927696 -179760158 - MER2 DNA MER2_type 0 344 1 196 359 78 23 chr2 70927937 70928065 -179759789 + MIR3 SINE MIR 6 140 -68 789 244 30 76 chr2 70928497 70928777 -179759077 - MIR SINE MIR 0 262 2 549 282 79 10 chr2 70929994 70930196 -179757658 + MIR SINE MIR 13 228 -34 192 162 29 15 chr2 70930960 70931028 -179756826 + (TA)n Simple_repeat Simple_repeat 1 69 0 254 202 0 101 chr2 70931040 70931139 -179756715 - L1MC4 LINE L1 -1340 6702 6614 244 250 0 0 chr2 70931073 70931153 -179756701 + L1MC4 LINE L1 6624 6703 -1339 * 229 171 14 43 chr2 70931122 70931192 -179756662 + L1MCa LINE L1 2006 2073 -4353 * 212 200 17 0 chr2 70931748 70931808 -179756046 + (TA)n Simple_repeat Simple_repeat 1 61 0 276 339 25 20 chr2 70932085 70932330 -179755524 + L1MC4a LINE L1 4357 4602 -1544 256 344 54 11 chr2 70932419 70932698 -179755156 + L1MC4a LINE L1 4723 5013 -1133 1304 196 89 16 chr2 70932854 70933226 -179754628 + L1MB5 LINE L1 4399 4797 -1349 5422 148 28 14 chr2 70933472 70934853 -179753001 - L1MA5A LINE L1 -3 6294 4770 1720 175 129 21 chr2 70934868 70935874 -179751980 + L1MB5 LINE L1 4848 6135 -39 198 0 0 0 chr2 70936152 70936174 -179751680 + (TAA)n Simple_repeat Simple_repeat 1 22 0 416 170 125 0 chr2 70936177 70936289 -179751565 + L1MC3 LINE L1 7658 7783 -2 1736 262 67 28 chr2 70936384 70937060 -179750794 + L1MC4a LINE L1 5273 5974 -1834 251 315 14 0 chr2 70937521 70937594 -179750260 + L2 LINE L2 3240 3313 0 800 161 0 0 chr2 70937796 70937926 -179749928 - FLAM_C SINE Alu -3 130 1 6754 74 12 5 chr2 70938321 70939499 -179748355 + L1PA8 LINE L1 4972 6152 -20 2276 97 0 0 chr2 70940598 70940896 -179746958 - AluSq SINE Alu -15 298 1 201 291 89 38 chr2 70941293 70941372 -179746482 - L2 LINE L2 0 3272 3190 1232 230 116 45 chr2 70942380 70942802 -179745052 - MLT1C LTR MaLR 0 467 16 2074 138 0 3 chr2 70943568 70943864 -179743990 + AluSx SINE Alu 6 300 -12 748 278 6 0 chr2 70943918 70944087 -179743767 - MER58A DNA MER1_type -48 176 7 527 281 140 18 chr2 70944726 70944947 -179742907 + MIR SINE MIR 5 252 -10 204 125 0 0 chr2 70944953 70944985 -179742869 + (CAT)n Simple_repeat Simple_repeat 2 33 0 374 277 12 0 chr2 70945042 70945125 -179742729 - L2 LINE L2 -23 3290 3207 424 231 68 8 chr2 70945140 70945257 -179742597 - L2 LINE L2 0 3313 3190 260 326 53 45 chr2 70945269 70945401 -179742453 + L2 LINE L2 3140 3272 0 342 0 0 0 chr2 70946609 70946647 -179741207 + (TG)n Simple_repeat Simple_repeat 1 38 0 2292 114 0 0 chr2 70948618 70948925 -179738929 - AluSq SINE Alu -6 307 1 535 285 94 55 chr2 70949161 70949396 -179738458 - MIR SINE MIR -6 256 13 22 0 0 0 chr2 70950354 70950376 -179737478 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 70951777 70951806 -179736048 + AT_rich Low_complexity Low_complexity 1 29 0 445 246 45 0 chr2 70951982 70952092 -179735762 + MIR3 SINE MIR 88 202 -6 519 261 97 74 chr2 70952263 70952562 -179735292 - MLT1J LTR MaLR -203 308 3 429 240 16 16 chr2 70953613 70953738 -179734116 - LTR67 LTR ERVL -2 555 431 320 325 179 0 chr2 70954077 70954228 -179733626 - MER5A DNA MER1_type -3 186 9 2501 211 76 38 chr2 70954308 70955048 -179732806 - L1ME2 LINE L1 -8 6156 5389 342 358 61 6 chr2 70956346 70956511 -179731343 + MIR3 SINE MIR 8 181 -27 389 274 8 48 chr2 70956619 70956743 -179731111 - MIR SINE MIR -70 192 74 7280 175 21 8 chr2 70956980 70958707 -179729147 - L1PA16 LINE L1 -15 6151 4383 404 19 19 0 chr2 70958707 70958760 -179729094 + (TG)n Simple_repeat Simple_repeat 2 55 0 7280 175 21 8 chr2 70958760 70959367 -179728487 - L1PA16 LINE L1 -1783 4383 3785 1359 229 9 3 chr2 70959365 70959688 -179728166 + L1PA16 LINE L1 3449 3773 -2373 * 508 268 88 5 chr2 70960125 70960319 -179727535 + L2 LINE L2 3104 3313 0 636 279 93 22 chr2 70960739 70960965 -179726889 + MIR SINE MIR 21 262 0 240 241 48 12 chr2 70962576 70962659 -179725195 - MLT1H LTR MaLR -16 579 494 390 317 114 42 chr2 70962732 70962994 -179724860 - MLT1H LTR MaLR -237 312 32 397 323 108 23 chr2 70963333 70963732 -179724122 - L1ME4a LINE L1 -4 6117 5685 392 317 17 0 chr2 70965239 70965359 -179722495 + L2 LINE L2 3192 3313 0 361 194 33 9 chr2 70965460 70965685 -179722169 + GA-rich Low_complexity Low_complexity 1 230 0 312 91 0 0 chr2 70967343 70967387 -179720467 + (A)n Simple_repeat Simple_repeat 1 44 0 2061 143 0 22 chr2 70968975 70969290 -179718564 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr2 70969365 70969386 -179718468 + AT_rich Low_complexity Low_complexity 1 21 0 509 259 58 91 chr2 70969457 70969731 -179718123 + MLT1I LTR MaLR 80 331 -78 1869 115 52 71 chr2 70969731 70970113 -179717741 - THE1C LTR MaLR 0 375 1 509 259 58 91 chr2 70970113 70970189 -179717665 + MLT1I LTR MaLR 331 408 -1 765 200 7 39 chr2 70971575 70971774 -179716080 - FRAM SINE Alu 0 189 1 361 109 0 0 chr2 70973386 70973441 -179714413 - MLT2A2 LTR ERVL 0 520 466 193 229 14 14 chr2 70973452 70973522 -179714332 + (TA)n Simple_repeat Simple_repeat 2 71 0 2934 102 30 0 chr2 70973528 70973929 -179713925 - MLT2A2 LTR ERVL -40 413 1 816 249 57 5 chr2 70973980 70974189 -179713665 - MIR SINE MIR -21 241 22 2259 66 0 75 chr2 70974602 70974922 -179712932 + AluY SINE Alu 1 296 -15 1885 150 142 16 chr2 70976515 70976895 -179710959 - MSTA LTR MaLR 0 428 1 2056 256 46 4 chr2 70977452 70978172 -179709682 - Zaphod DNA AcHobo 0 4031 3282 333 0 0 0 chr2 70978214 70978251 -179709603 + (CA)n Simple_repeat Simple_repeat 2 38 0 16571 204 24 18 chr2 70978536 70983988 -179703866 + L1PA15 LINE L1 1229 6728 -88 725 300 38 8 chr2 70983989 70984229 -179703625 - Zaphod DNA AcHobo -3743 288 42 260 230 40 30 chr2 70984367 70984467 -179703387 + CT-rich Low_complexity Low_complexity 3 103 0 5161 43 0 3 chr2 70984526 70985156 -179702698 + L1PA5 LINE L1 5527 6154 0 523 267 115 10 chr2 70985440 70985728 -179702126 - L1ME LINE L1 -303 5818 5501 350 325 68 29 chr2 70985795 70986001 -179701853 - L1ME LINE L1 -2317 5468 5255 2249 114 0 0 chr2 70986012 70986310 -179701544 + AluSq SINE Alu 1 298 -15 454 301 65 83 chr2 70986733 70987348 -179700506 - L1ME LINE L1 -1300 4846 4243 30 59 0 0 chr2 70987357 70987408 -179700446 + AT_rich Low_complexity Low_complexity 1 51 0 681 208 132 45 chr2 70987662 70987924 -179699930 - L1ME2 LINE L1 -17 6149 5866 3597 237 55 60 chr2 70987939 70989211 -179698643 - L1ME2 LINE L1 -747 5399 4104 240 121 0 0 chr2 70989211 70989244 -179698610 - U2 snRNA snRNA -155 33 1 3597 237 55 60 chr2 70989244 70989512 -179698342 - L1ME2 LINE L1 -2042 4104 3836 397 320 59 20 chr2 70989654 70989857 -179697997 - L1ME LINE L1 -2178 3968 3758 648 301 169 27 chr2 70989898 70990757 -179697097 - L1ME LINE L1 -2467 3679 2676 1155 283 87 77 chr2 70991112 70992053 -179695801 - L2 LINE L2 -569 2745 1795 550 217 103 107 chr2 70994159 70994412 -179693442 - MIR SINE MIR -10 252 1 422 250 46 83 chr2 70996986 70997033 -179690821 + L2 LINE L2 3105 3152 -161 2168 107 0 10 chr2 70997033 70997331 -179690523 - AluSq SINE Alu -18 295 1 422 250 46 83 chr2 70997331 70997499 -179690355 + L2 LINE L2 3152 3312 -1 189 294 110 78 chr2 70998559 70998774 -179689080 + L2 LINE L2 2839 3064 -249 1085 88 6 0 chr2 70998774 70998934 -179688920 - L1MA4A LINE L1 -1 6302 6142 189 294 110 78 chr2 70998934 70998963 -179688891 + L2 LINE L2 3064 3091 -222 202 320 40 0 chr2 70999025 70999100 -179688754 + L2 LINE L2 3223 3300 -13 189 0 0 0 chr2 70999100 70999121 -179688733 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 197 268 0 0 chr2 70999447 70999488 -179688366 + MIR SINE MIR 94 134 -74 246 290 54 11 chr2 71000425 71000518 -179687336 - MIR SINE MIR -95 167 71 396 0 0 0 chr2 71000652 71000696 -179687158 + (CA)n Simple_repeat Simple_repeat 2 45 0 613 181 96 28 chr2 71000769 71000946 -179686908 - MER53 DNA DNA 0 189 1 534 240 123 7 chr2 71001154 71001308 -179686546 + MIR SINE MIR 77 248 -14 190 243 171 0 chr2 71001361 71001431 -179686423 - MIR SINE MIR -64 144 63 644 287 173 46 chr2 71001528 71002072 -179685782 + MLT1L LTR MaLR 3 615 0 243 61 0 0 chr2 71002606 71002639 -179685215 + (TAA)n Simple_repeat Simple_repeat 3 35 0 291 307 114 51 chr2 71002791 71002967 -179684887 - MER5A DNA MER1_type 0 189 3 375 221 0 26 chr2 71003024 71003101 -179684753 + MER5A DNA MER1_type 1 75 -114 843 158 0 0 chr2 71003101 71003268 -179684586 - FLAM_C SINE Alu 0 167 1 624 232 29 22 chr2 71003297 71003435 -179684419 + MER5A DNA MER1_type 51 189 0 479 182 71 10 chr2 71005782 71005822 -179682032 + MER2 DNA MER2_type 1 37 -308 372 94 0 0 chr2 71005822 71005875 -179681979 + (CA)n Simple_repeat Simple_repeat 2 54 0 479 182 71 10 chr2 71005875 71005933 -179681921 + MER2 DNA MER2_type 37 105 -240 207 194 0 0 chr2 71005981 71006017 -179681837 + (CATATA)n Simple_repeat Simple_repeat 2 37 0 482 290 76 34 chr2 71006042 71006133 -179681721 - MIR SINE MIR -10 252 166 910 214 37 23 chr2 71006133 71006348 -179681506 - MER20 DNA MER1_type -1 218 1 482 290 76 34 chr2 71006348 71006494 -179681360 - MIR SINE MIR -96 166 5 711 286 46 17 chr2 71008682 71008923 -179678931 + MIR SINE MIR 15 262 0 4343 152 31 27 chr2 71009496 71010404 -179677450 + L1MB2 LINE L1 4883 5786 -385 223 28 56 0 chr2 71010404 71010440 -179677414 + (TA)n Simple_repeat Simple_repeat 1 38 0 * 279 0 0 0 chr2 71010439 71010470 -179677384 + (CA)n Simple_repeat Simple_repeat 2 32 0 4343 152 31 27 chr2 71010440 71010809 -179677045 + L1MB2 LINE L1 5786 6135 -36 470 236 11 0 chr2 71011769 71011954 -179675900 + CT-rich Low_complexity Low_complexity 1 187 0 22 56 0 0 chr2 71012512 71012548 -179675306 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 71012661 71012682 -179675172 + AT_rich Low_complexity Low_complexity 1 21 0 814 191 0 0 chr2 71012790 71012926 -179674928 - FRAM SINE Alu -17 159 24 201 74 0 0 chr2 71012973 71013000 -179674854 + (TG)n Simple_repeat Simple_repeat 2 28 0 229 130 0 0 chr2 71013008 71013054 -179674800 - LTR66 LTR ERVL -171 439 394 573 129 0 0 chr2 71013062 71013155 -179674699 + (CA)n Simple_repeat Simple_repeat 2 94 0 664 176 0 40 chr2 71013155 71013280 -179674574 - FLAM_C SINE Alu -23 120 1 390 318 210 0 chr2 71013429 71013605 -179674249 + MIR SINE MIR 48 260 -2 254 346 12 0 chr2 71013613 71013694 -179674160 + MIR3 SINE MIR 123 204 -4 823 184 66 0 chr2 71016810 71016962 -179670892 - FRAM SINE Alu -13 163 2 2423 85 0 7 chr2 71016975 71017281 -179670573 - AluY SINE Alu -7 304 1 29 47 0 0 chr2 71017588 71017631 -179670223 + AT_rich Low_complexity Low_complexity 1 43 0 766 58 0 0 chr2 71017842 71017945 -179669909 + L1PA6 LINE L1 5918 6020 -134 267 245 0 0 chr2 71018834 71018883 -179668971 + MIR3 SINE MIR 113 161 -47 13395 131 52 7 chr2 71019044 71021358 -179666496 - Tigger1 DNA MER2_type 0 2418 1 190 355 28 37 chr2 71021371 71021478 -179666376 - MIR SINE MIR -61 147 42 246 246 113 58 chr2 71024184 71024340 -179663514 + MLT1J1 LTR MaLR 65 234 -216 315 258 62 47 chr2 71024365 71024493 -179663361 + MLT1J LTR MaLR 329 458 -53 573 277 27 58 chr2 71025642 71025866 -179661988 - MIR SINE MIR -29 233 17 245 303 70 53 chr2 71026189 71026433 -179661421 + L2 LINE L2 2624 2871 -443 226 376 0 0 chr2 71026824 71026917 -179660937 + MIR SINE MIR 169 261 -1 455 303 56 0 chr2 71026959 71027101 -179660753 + L2 LINE L2 3160 3309 -4 947 106 17 17 chr2 71028011 71028190 -179659664 + (TCTCC)n Simple_repeat Simple_repeat 1 179 0 3759 162 13 25 chr2 71028237 71028990 -179658864 - L1PA14 LINE L1 -1754 4392 3649 * 5838 133 19 0 chr2 71028982 71030714 -179657140 + L1PA14 LINE L1 4399 6160 -1 624 285 53 19 chr2 71032510 71032748 -179655106 + MIR SINE MIR 20 262 0 653 305 11 16 chr2 71032889 71033079 -179654775 + MIR SINE MIR 55 243 -19 243 327 113 61 chr2 71033434 71034187 -179653667 + L2 LINE L2 1967 2758 -556 362 287 87 26 chr2 71034488 71034683 -179653171 - MLT1K LTR MaLR -49 539 333 463 277 10 10 chr2 71037269 71037370 -179650484 - L2 LINE L2 -35 3237 3137 21 0 0 0 chr2 71037482 71037503 -179650351 + AT_rich Low_complexity Low_complexity 1 21 0 325 268 113 14 chr2 71038538 71038680 -179649174 - L2 LINE L2 0 3313 3158 263 355 36 14 chr2 71039121 71039259 -179648595 - MIR SINE MIR -75 187 47 397 313 14 7 chr2 71040629 71040776 -179647078 - MLT1J1 LTR MaLR -264 182 35 231 331 99 7 chr2 71041072 71041214 -179646640 - L3b LINE CR1 -299 1284 1130 396 305 19 0 chr2 71042450 71042555 -179645299 + MIR SINE MIR 47 153 -109 1293 160 29 0 chr2 71042566 71042804 -179645050 + L1PA13 LINE L1 5912 6156 -7 273 57 0 0 chr2 71042949 71042984 -179644870 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 333 0 0 0 chr2 71044847 71044884 -179642970 + (TG)n Simple_repeat Simple_repeat 2 38 0 730 235 34 22 chr2 71046305 71046484 -179641370 + MLT1B LTR MaLR 8 188 -186 227 200 0 22 chr2 71046484 71046529 -179641325 + CT-rich Low_complexity Low_complexity 4 47 0 877 221 47 0 chr2 71046540 71046730 -179641124 + MLT1B LTR MaLR 192 390 0 2397 67 3 0 chr2 71046893 71047193 -179640661 + AluY SINE Alu 1 301 -10 443 203 38 30 chr2 71047543 71047676 -179640178 - MLT1A2 LTR MaLR -201 189 55 411 331 48 62 chr2 71047777 71048215 -179639639 + L2 LINE L2 2216 2647 -667 393 353 112 12 chr2 71048266 71048756 -179639098 + L2 LINE L2 1843 2381 -933 1015 273 103 50 chr2 71049260 71049920 -179637934 - L1M4 LINE L1 -1870 4276 3582 430 324 91 18 chr2 71050161 71050719 -179637135 - L1M4 LINE L1 -2887 3259 2661 3000 160 20 4 chr2 71050974 71051525 -179636329 + L1MA3 LINE L1 4534 5093 -1053 * 4726 125 24 1 chr2 71051516 71052266 -179635588 + L1MA3 LINE L1 5440 6206 -99 489 264 83 31 chr2 71052264 71052493 -179635361 + L1ME4a LINE L1 5585 5826 -295 * 2564 225 39 7 chr2 71052496 71053106 -179634748 + L1MC4 LINE L1 7407 8036 -6 264 276 48 14 chr2 71053148 71053293 -179634561 - L1M4 LINE L1 -3761 2385 2236 346 249 191 22 chr2 71053299 71053576 -179634278 - L1ME4a LINE L1 -162 5959 5636 24 0 0 0 chr2 71053588 71053612 -179634242 + AT_rich Low_complexity Low_complexity 1 24 0 846 159 148 42 chr2 71053689 71053878 -179633976 + AluJb SINE Alu 87 295 -17 649 36 0 0 chr2 71054050 71054133 -179633721 - L1PA4 LINE L1 -3 6152 6070 28 0 0 0 chr2 71054195 71054223 -179633631 + AT_rich Low_complexity Low_complexity 1 28 0 411 328 94 56 chr2 71054247 71054460 -179633394 - L1ME4a LINE L1 -935 5211 5008 1813 178 0 9 chr2 71054460 71054775 -179633079 - AluSx SINE Alu 0 312 1 411 328 94 56 chr2 71054775 71055190 -179632664 - L1ME4a LINE L1 -1138 5008 4559 192 152 0 0 chr2 71056470 71056503 -179631351 + GA-rich Low_complexity Low_complexity 4 36 0 201 121 0 0 chr2 71056853 71056886 -179630968 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 281 329 156 48 chr2 71057098 71057574 -179630280 - L2 LINE L2 -212 3060 2467 393 22 0 0 chr2 71057574 71057620 -179630234 + (TG)n Simple_repeat Simple_repeat 2 47 0 281 329 156 48 chr2 71057620 71057854 -179630000 - L2 LINE L2 -805 2467 2260 21 36 0 0 chr2 71058069 71058097 -179629757 + AT_rich Low_complexity Low_complexity 1 28 0 5934 40 7 0 chr2 71058097 71058822 -179629032 - L1PA5 LINE L1 -8 6146 5417 2220 70 0 10 chr2 71058822 71059121 -179628733 + L1P LINE L1 704 999 -5147 290 278 0 0 chr2 71060050 71060140 -179627714 - L1MA8 LINE L1 -22 6269 6180 2669 130 31 5 chr2 71060231 71060646 -179627208 - MSTA LTR MaLR 0 428 3 230 294 59 0 chr2 71060800 71060868 -179626986 - HsTC2 DNA Tc2 -1076 822 751 25 0 0 0 chr2 71061117 71061142 -179626712 + AT_rich Low_complexity Low_complexity 1 25 0 796 294 45 58 chr2 71061605 71062091 -179625763 - L1MC/D LINE L1 -2024 5784 5305 252 247 91 0 chr2 71062358 71062435 -179625419 - L1P LINE L1 -1137 5009 4926 468 337 63 48 chr2 71062450 71063034 -179624820 - L1MC/D LINE L1 -1236 4910 4318 313 360 0 14 chr2 71063106 71063253 -179624601 - L1P LINE L1 -1903 4243 4099 394 286 206 29 chr2 71063400 71063711 -179624143 - L1MC/D LINE L1 -2163 3983 3618 237 296 14 0 chr2 71063934 71064005 -179623849 - L1MC/D LINE L1 -1892 5916 5845 330 250 68 57 chr2 71064091 71064181 -179623673 - L1MC/D LINE L1 -341 5780 5693 2869 161 90 39 chr2 71064181 71064871 -179622983 + LTR8A LTR ERV1 3 727 0 330 250 68 57 chr2 71064871 71064956 -179622898 - L1MC/D LINE L1 -428 5693 5603 3216 164 47 8 chr2 71066183 71066803 -179621051 + LTR48B LTR ERV1 1 644 0 2008 124 7 3 chr2 71068572 71068855 -179618999 + AluSg SINE Alu 1 284 -26 539 247 0 71 chr2 71068928 71069082 -179618772 + MIR SINE MIR 12 154 -108 1392 225 146 22 chr2 71069089 71069533 -179618321 - L1MC4 LINE L1 -903 7139 6641 314 263 43 27 chr2 71069578 71069775 -179618079 - L1MC4 LINE L1 -1189 6619 6472 236 270 0 0 chr2 71069899 71069962 -179617892 + GA-rich Low_complexity Low_complexity 2 64 0 2309 79 0 0 chr2 71070242 71070532 -179617322 - AluSg SINE Alu -20 290 1 431 301 154 14 chr2 71070585 71071176 -179616678 + L1MEc LINE L1 1085 1758 -4638 786 154 123 5 chr2 71071250 71071535 -179616319 - THE1C LTR MaLR 0 375 1 1680 81 0 14 chr2 71071816 71072038 -179615816 + AluSg/x SINE Alu 87 305 -5 23 0 0 0 chr2 71072039 71072062 -179615792 + AT_rich Low_complexity Low_complexity 1 23 0 238 204 23 0 chr2 71072242 71072330 -179615524 + (TA)n Simple_repeat Simple_repeat 1 90 0 625 294 33 6 chr2 71072336 71072666 -179615188 + L1MEc LINE L1 2379 2717 -3498 813 219 179 21 chr2 71072673 71072952 -179614902 + MER5C DNA MER1_type 2 324 0 482 248 0 24 chr2 71072955 71073080 -179614774 + L1MEc LINE L1 2719 2840 -3375 831 143 0 0 chr2 71073131 71073250 -179614604 + FLAM_C SINE Alu 6 124 -19 766 191 3 17 chr2 71074131 71074308 -179613546 + L1M4 LINE L1 5337 5515 -669 440 212 18 0 chr2 71074592 71074705 -179613149 + L1M4 LINE L1 5471 5585 -599 * 2205 237 69 61 chr2 71074695 71075378 -179612476 - L1ME1 LINE L1 -48 6118 5427 2719 79 6 0 chr2 71075378 71075731 -179612123 + THE1A LTR MaLR 1 355 0 2205 237 69 61 chr2 71075731 71075932 -179611922 - L1ME1 LINE L1 -739 5427 5229 568 202 0 0 chr2 71075926 71076030 -179611824 - L1ME LINE L1 -488 5747 5644 * 3685 232 85 32 chr2 71076029 71077384 -179610470 + L1M4 LINE L1 3790 5215 -931 2661 267 45 38 chr2 71077383 71077742 -179610112 - L1ME LINE L1 -2019 4196 3841 * 7068 180 10 13 chr2 71077742 71079967 -179607887 + L1PA15 LINE L1 3912 6165 0 2661 267 45 38 chr2 71079967 71080658 -179607196 - L1ME LINE L1 -2374 3841 3135 441 0 0 0 chr2 71080658 71080707 -179607147 + (TG)n Simple_repeat Simple_repeat 2 50 0 2661 267 45 38 chr2 71080707 71080761 -179607093 - L1ME LINE L1 -3080 3135 3083 5553 42 6 1 chr2 71080791 71081483 -179606371 - L1PA5 LINE L1 0 6154 5460 3798 35 0 0 chr2 71081483 71081945 -179605909 - L1PA5 LINE L1 -1588 4558 4097 2588 260 40 29 chr2 71081944 71082729 -179605125 - L1ME LINE L1 -5553 843 51 * 23 0 0 0 chr2 71083214 71083237 -179604617 + AT_rich Low_complexity Low_complexity 1 23 0 34 79 0 0 chr2 71083381 71083457 -179604397 + AT_rich Low_complexity Low_complexity 1 76 0 21 0 0 0 chr2 71083697 71083718 -179604136 + AT_rich Low_complexity Low_complexity 1 21 0 253 229 0 48 chr2 71084580 71084663 -179603191 + (TATATG)n Simple_repeat Simple_repeat 3 81 0 471 240 0 0 chr2 71085138 71085284 -179602570 + (TA)n Simple_repeat Simple_repeat 1 146 0 340 317 67 18 chr2 71085704 71085868 -179601986 + MER5A DNA MER1_type 7 189 0 252 0 0 0 chr2 71086714 71086742 -179601112 + (TG)n Simple_repeat Simple_repeat 2 29 0 247 246 16 0 chr2 71087314 71087375 -179600479 + MER116 DNA Mariner 18 79 -1 287 262 122 68 chr2 71087390 71087653 -179600201 - L1ME4a LINE L1 -230 5891 5615 1754 140 4 4 chr2 71087755 71088012 -179599842 + AluSx SINE Alu 1 257 -55 1355 112 5 10 chr2 71088012 71088209 -179599645 + AluSp SINE Alu 105 300 -13 232 245 0 0 chr2 71089478 71089527 -179598327 + (GAATG)n Simple_repeat Simple_repeat 3 51 0 465 339 118 31 chr2 71089858 71090247 -179597607 + L2 LINE L2 2869 3291 -22 222 37 0 0 chr2 71090252 71090279 -179597575 + (TGGA)n Simple_repeat Simple_repeat 1 27 0 2297 64 0 0 chr2 71091826 71092152 -179595702 - AluY SINE Alu 0 328 3 6981 53 20 5 chr2 71092163 71093124 -179594730 - L1PA8 LINE L1 -5 6167 5205 468 281 50 0 chr2 71093785 71093906 -179593948 + MIR SINE MIR 28 154 -108 225 196 0 0 chr2 71094429 71094480 -179593374 + (TA)n Simple_repeat Simple_repeat 1 51 0 1695 217 143 18 chr2 71096615 71097223 -179590631 - L1MC4 LINE L1 -4 8038 7355 1095 275 111 22 chr2 71097221 71098097 -179589757 - L1MC4a LINE L1 -1404 6404 5414 * 268 327 50 23 chr2 71098351 71098611 -179589243 - L1MC4a LINE L1 -990 5156 4890 1357 301 100 33 chr2 71099091 71099558 -179588296 - L1MC4a LINE L1 -1310 4836 4402 1787 152 99 6 chr2 71099558 71099720 -179588134 - THE1C LTR MaLR 0 375 230 372 43 0 0 chr2 71099720 71099766 -179588088 + (GA)n Simple_repeat Simple_repeat 1 46 0 1787 152 99 6 chr2 71099766 71099946 -179587908 - THE1C LTR MaLR -145 230 1 1357 301 100 33 chr2 71099946 71101642 -179586212 - L1MC4a LINE L1 -1744 4402 2527 219 208 21 0 chr2 71105413 71105461 -179582393 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 1462 134 17 0 chr2 71105461 71105699 -179582155 - L1MB1 LINE L1 -2 6166 5925 21 0 0 0 chr2 71105830 71105851 -179582003 + AT_rich Low_complexity Low_complexity 1 21 0 187 317 67 17 chr2 71105868 71105928 -179581926 + L2 LINE L2 3163 3225 -47 307 260 30 0 chr2 71108059 71108159 -179579695 + (TA)n Simple_repeat Simple_repeat 2 104 0 1757 224 70 27 chr2 71108283 71108725 -179579129 + L1MA1 LINE L1 2 462 -7103 15847 149 21 15 chr2 71108727 71110445 -179577409 + L1MA1 LINE L1 2154 3859 -3862 2017 82 26 56 chr2 71110445 71110773 -179577081 + AluY SINE Alu 1 319 0 15847 149 21 15 chr2 71110773 71114571 -179573283 + L1MA1 LINE L1 3859 7721 0 361 248 152 16 chr2 71115558 71115683 -179572171 - L2 LINE L2 -3 3310 3169 485 282 75 67 chr2 71115815 71116070 -179571784 + MIR SINE MIR 4 260 -2 573 247 29 12 chr2 71116466 71116636 -179571218 + L1ME4a LINE L1 5558 5730 -391 336 242 107 27 chr2 71116749 71116898 -179570956 + L1ME4a LINE L1 5961 6121 0 1132 179 44 64 chr2 71117670 71117999 -179569855 + MER33 DNA MER1_type 1 311 -13 1847 198 37 32 chr2 71120601 71121066 -179566788 + MLT1C LTR MaLR 1 467 0 233 305 204 24 chr2 71121105 71121272 -179566582 + MIR3 SINE MIR 2 198 -10 213 295 65 0 chr2 71121990 71122079 -179565775 - MIR3 SINE MIR -40 168 70 3018 51 0 3 chr2 71122238 71122613 -179565241 + L1PA7 LINE L1 5777 6150 -4 1329 192 104 24 chr2 71124421 71124759 -179563095 + MLT1A1 LTR MaLR 1 365 0 195 139 0 0 chr2 71124853 71124889 -179562965 + (TC)n Simple_repeat Simple_repeat 1 36 0 299 125 54 0 chr2 71126473 71126529 -179561325 + L1P4 LINE L1 5465 5523 -645 4751 95 19 0 chr2 71126780 71127463 -179560391 + L1PA13 LINE L1 5465 6160 -3 1745 167 3 10 chr2 71128005 71128310 -179559544 + AluJb SINE Alu 1 303 -9 1757 121 13 162 chr2 71128982 71129255 -179558599 - MLT1B LTR MaLR -2 388 208 2061 112 12 40 chr2 71129255 71129576 -179558278 - AluSx SINE Alu 0 312 1 1757 121 13 162 chr2 71129576 71129758 -179558096 - MLT1B LTR MaLR -182 208 1 407 370 43 0 chr2 71130048 71130232 -179557622 - MIR SINE MIR -6 256 65 302 309 125 25 chr2 71130768 71131127 -179556727 + L1ME4a LINE L1 5724 6118 -3 570 255 37 12 chr2 71131457 71131618 -179556236 + MER5B DNA MER1_type 9 173 -5 222 274 0 0 chr2 71132044 71132095 -179555759 + L2 LINE L2 3262 3312 -1 853 214 217 18 chr2 71134475 71134909 -179552945 - MER113 DNA MER1_type? 0 521 2 258 32 0 0 chr2 71135724 71135755 -179552099 + (CA)n Simple_repeat Simple_repeat 2 32 0 6008 20 3 3 chr2 71136803 71137513 -179550341 - L1PA3 LINE L1 -3 6152 5443 227 299 99 45 chr2 71137873 71138074 -179549780 + L2 LINE L2 2037 2248 -1066 840 219 66 0 chr2 71138085 71138281 -179549573 - LTR16C LTR ERVL -5 486 278 201 355 0 0 chr2 71139127 71139189 -179548665 + MIR SINE MIR 120 181 -81 195 162 0 0 chr2 71140002 71140039 -179547815 + (CA)n Simple_repeat Simple_repeat 2 38 0 193 175 25 25 chr2 71140910 71140950 -179546904 + L2 LINE L2 3216 3255 -17 * 215 159 23 23 chr2 71140917 71140961 -179546893 + MIR SINE MIR 219 262 0 306 0 0 0 chr2 71142192 71142226 -179545628 + (TG)n Simple_repeat Simple_repeat 2 35 0 731 171 17 34 chr2 71142297 71142473 -179545381 + L1MA10 LINE L1 6161 6333 -1 378 351 86 56 chr2 71142727 71143123 -179544731 - L2 LINE L2 -2 3270 2863 232 310 39 54 chr2 71143223 71143352 -179544502 + MER5A DNA MER1_type 44 170 -19 1625 171 87 5 chr2 71144044 71144423 -179543431 + Charlie1 DNA MER1_type 2346 2755 -6 243 0 0 0 chr2 71144643 71144670 -179543184 + (A)n Simple_repeat Simple_repeat 1 27 0 35 63 0 0 chr2 71144945 71145008 -179542846 + AT_rich Low_complexity Low_complexity 1 63 0 308 355 62 28 chr2 71145090 71145301 -179542553 - L3 LINE CR1 -774 803 586 227 226 19 0 chr2 71146571 71146624 -179541230 + (TTCA)n Simple_repeat Simple_repeat 1 54 0 950 296 45 0 chr2 71147240 71147527 -179540327 + LTR16C LTR ERVL 192 491 0 266 337 53 0 chr2 71147955 71148050 -179539804 - L2 LINE L2 0 3313 3214 275 238 202 0 chr2 71148096 71148180 -179539674 - L2 LINE L2 -5 3308 3208 1633 158 46 46 chr2 71149490 71149793 -179538061 - AluJo SINE Alu -5 307 5 1483 196 17 29 chr2 71149817 71149939 -179537915 - L1MC3 LINE L1 -1629 6156 6034 234 0 0 0 chr2 71149939 71149965 -179537889 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1483 196 17 29 chr2 71149965 71150188 -179537666 - L1MC3 LINE L1 -1751 6034 5815 41822 40 3 3 chr2 71150209 71156362 -179531492 - L1PA4 LINE L1 -3 6152 1 423 358 12 18 chr2 71156479 71156644 -179531210 - MER5A DNA MER1_type -9 180 17 256 280 50 75 chr2 71156932 71157132 -179530722 - MLT1H LTR MaLR -251 298 104 287 321 46 61 chr2 71157244 71157440 -179530414 + MIR SINE MIR 20 212 -50 220 329 53 33 chr2 71157542 71157694 -179530160 + L2 LINE L2 2622 2776 -538 1254 152 62 134 chr2 71158313 71158687 -179529167 + MER7A DNA MER2_type 2 346 0 344 287 44 17 chr2 71158875 71159006 -179528848 - MIR SINE MIR -68 140 39 195 265 84 12 chr2 71159731 71159814 -179528040 + L3b LINE CR1 1286 1374 -209 207 0 0 0 chr2 71160172 71160195 -179527659 + (A)n Simple_repeat Simple_repeat 1 23 0 2041 145 3 3 chr2 71160472 71160783 -179527071 + AluSx SINE Alu 1 311 -1 241 361 0 14 chr2 71161139 71161211 -179526643 - L2 LINE L2 -17 3255 3185 324 358 185 1 chr2 71161289 71161462 -179526392 - MIR3 SINE MIR -2 206 1 217 277 0 0 chr2 71161691 71161756 -179526098 + (ATG)n Simple_repeat Simple_repeat 1 65 0 304 238 12 24 chr2 71162438 71162522 -179525332 + MIR SINE MIR 133 215 -47 244 291 0 0 chr2 71162548 71162634 -179525220 + (CAT)n Simple_repeat Simple_repeat 1 86 0 1042 236 34 48 chr2 71163775 71164226 -179523628 + L1ME1 LINE L1 5452 5857 -309 613 236 37 15 chr2 71164234 71164458 -179523396 + L1MA10 LINE L1 5944 6326 -8 25 75 0 0 chr2 71165307 71165360 -179522494 + AT_rich Low_complexity Low_complexity 1 53 0 448 248 26 26 chr2 71165618 71165731 -179522123 + MER5B DNA MER1_type 4 116 -62 1392 97 23 0 chr2 71166499 71166716 -179521138 + L1MA4A LINE L1 6080 6301 -2 329 325 26 0 chr2 71166875 71166989 -179520865 - MER5A DNA MER1_type -65 124 8 304 288 206 14 chr2 71166986 71167132 -179520722 - MER5A DNA MER1_type -4 185 12 * 814 245 48 0 chr2 71167394 71167602 -179520252 + MER58A DNA MER1_type 7 224 0 528 203 189 7 chr2 71168174 71168322 -179519532 + MER5A DNA MER1_type 14 188 -1 329 307 207 7 chr2 71168346 71168496 -179519358 + MIR3 SINE MIR 16 195 -13 208 333 0 0 chr2 71168801 71168864 -179518990 + GA-rich Low_complexity Low_complexity 2 64 0 24 32 0 0 chr2 71169210 71169241 -179518613 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 71170444 71170467 -179517387 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 71171257 71171278 -179516576 + AT_rich Low_complexity Low_complexity 1 21 0 1761 184 3 0 chr2 71171694 71171998 -179515856 + AluSx SINE Alu 1 305 -7 212 98 0 49 chr2 71172074 71172115 -179515739 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 22 56 0 0 chr2 71172298 71172334 -179515520 + AT_rich Low_complexity Low_complexity 1 36 0 571 164 23 6 chr2 71174186 71174363 -179513491 + (CA)n Simple_repeat Simple_repeat 1 180 0 235 136 0 30 chr2 71174380 71174446 -179513408 + (CA)n Simple_repeat Simple_repeat 1 64 0 305 206 12 24 chr2 71174735 71174905 -179512949 + (CA)n Simple_repeat Simple_repeat 2 169 0 310 264 19 9 chr2 71174917 71175023 -179512831 + (CA)n Simple_repeat Simple_repeat 1 107 0 1553 206 51 43 chr2 71177305 71177698 -179510156 + MSTD LTR MaLR 1 396 0 471 313 87 15 chr2 71177811 71178006 -179509848 - MIR SINE MIR 0 262 54 810 304 115 31 chr2 71178440 71178920 -179508934 - MER115 DNA AcHobo -6 687 168 299 248 290 41 chr2 71178939 71179084 -179508770 + MER5A DNA MER1_type 9 189 0 209 310 47 58 chr2 71179443 71179614 -179508240 + MER5A DNA MER1_type 3 171 -18 220 328 30 53 chr2 71179476 71179607 -179508247 - MER5B DNA MER1_type -25 153 26 203 194 0 0 chr2 71179996 71180032 -179507822 + A-rich Low_complexity Low_complexity 1 36 0 358 278 204 31 chr2 71180202 71180393 -179507461 - MIR SINE MIR -5 257 34 653 236 171 20 chr2 71181120 71181319 -179506535 + MIR SINE MIR 13 241 -21 21 57 0 0 chr2 71182321 71182356 -179505498 + AT_rich Low_complexity Low_complexity 1 35 0 187 244 24 0 chr2 71182715 71182756 -179505098 - MIR SINE MIR -12 250 209 724 249 141 19 chr2 71182806 71183244 -179504610 + MLT1H LTR MaLR 53 585 -5 246 213 115 0 chr2 71183275 71183336 -179504518 - MIR SINE MIR -77 185 118 2144 113 7 0 chr2 71183356 71183649 -179504205 + AluSq SINE Alu 1 295 -18 294 256 263 0 chr2 71184017 71184150 -179503704 - MIR3 SINE MIR -11 197 30 25 0 0 0 chr2 71184607 71184632 -179503222 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 71187906 71187928 -179499926 + AT_rich Low_complexity Low_complexity 1 22 0 202 132 38 0 chr2 71188477 71188530 -179499324 + (TA)n Simple_repeat Simple_repeat 2 56 0 660 113 7 14 chr2 71188540 71188549 -179499305 + (TAGA)n Simple_repeat Simple_repeat 2 10 -132 1986 181 12 3 chr2 71188549 71188887 -179498967 - MER61A LTR ERV1 -2 341 1 660 113 7 14 chr2 71188887 71189019 -179498835 + (TAGA)n Simple_repeat Simple_repeat 10 142 0 2349 191 28 6 chr2 71189023 71189489 -179498365 - MLT2B2 LTR ERVL -39 476 1 22 0 0 0 chr2 71190173 71190195 -179497659 + AT_rich Low_complexity Low_complexity 1 22 0 1617 193 81 127 chr2 71190819 71191600 -179496254 + LTR1B LTR ERV1 1 745 -81 527 240 8 8 chr2 71191679 71191800 -179496054 + LTR28 LTR ERV1 900 1020 0 228 355 75 0 chr2 71192795 71192902 -179494952 + MER5A DNA MER1_type 13 127 -62 505 187 0 0 chr2 71193168 71193259 -179494595 + FRAM SINE Alu 76 166 -10 538 214 18 109 chr2 71194443 71194719 -179493135 - LTR41 LTR ERVL -6 767 517 646 195 86 11 chr2 71194874 71195048 -179492806 - LTR41 LTR ERVL -586 187 1 259 254 0 14 chr2 71195130 71195201 -179492653 - ERVL LTR ERVL -92 5672 5603 23 33 0 0 chr2 71195750 71195780 -179492074 + AT_rich Low_complexity Low_complexity 1 30 0 237 159 0 0 chr2 71196941 71196985 -179490869 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 351 351 42 24 chr2 71197171 71197336 -179490518 - MIR3 SINE MIR -6 202 35 457 219 9 0 chr2 71197730 71197835 -179490019 - MER20 DNA MER1_type -78 141 36 843 199 14 54 chr2 71198252 71198473 -179489381 - MER20 DNA MER1_type -7 212 1 653 236 171 20 chr2 71399045 71399244 -179288610 + MIR SINE MIR 13 241 -21 21 57 0 0 chr2 71400246 71400281 -179287573 + AT_rich Low_complexity Low_complexity 1 35 0 187 244 24 0 chr2 71400640 71400681 -179287173 - MIR SINE MIR -12 250 209 724 249 141 19 chr2 71400731 71401169 -179286685 + MLT1H LTR MaLR 53 585 -5 246 213 115 0 chr2 71401200 71401261 -179286593 - MIR SINE MIR -77 185 118 2144 113 7 0 chr2 71401281 71401574 -179286280 + AluSq SINE Alu 1 295 -18 294 256 263 0 chr2 71401942 71402075 -179285779 - MIR3 SINE MIR -11 197 30 25 0 0 0 chr2 71402532 71402557 -179285297 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 71405829 71405851 -179282003 + AT_rich Low_complexity Low_complexity 1 22 0 202 132 38 0 chr2 71406400 71406453 -179281401 + (TA)n Simple_repeat Simple_repeat 1 55 0 678 120 7 13 chr2 71406463 71406472 -179281382 + (TAGA)n Simple_repeat Simple_repeat 2 10 -140 1920 184 18 3 chr2 71406472 71406808 -179281046 - MER61A LTR ERV1 -2 341 1 678 120 7 13 chr2 71406808 71406948 -179280906 + (TAGA)n Simple_repeat Simple_repeat 10 150 0 297 186 29 0 chr2 71406949 71407019 -179280835 - MLT2B2 LTR ERVL -42 478 407 2102 184 28 2 chr2 71407123 71407519 -179280335 - MLT2B2 LTR ERVL -109 406 1 22 0 0 0 chr2 71408203 71408225 -179279629 + AT_rich Low_complexity Low_complexity 1 22 0 1596 189 83 130 chr2 71408677 71409459 -179278395 + LTR1B LTR ERV1 1 745 -81 489 242 17 8 chr2 71409538 71409658 -179278196 + LTR28 LTR ERV1 900 1020 0 228 355 75 0 chr2 71410653 71410760 -179277094 + MER5A DNA MER1_type 13 127 -62 505 187 0 0 chr2 71411026 71411117 -179276737 + FRAM SINE Alu 76 166 -10 538 214 18 109 chr2 71412398 71412674 -179275180 - LTR41 LTR ERVL -6 767 517 646 195 86 11 chr2 71412829 71413003 -179274851 - LTR41 LTR ERVL -586 187 1 259 254 0 14 chr2 71413085 71413156 -179274698 - ERVL LTR ERVL -92 5672 5603 23 33 0 0 chr2 71413705 71413735 -179274119 + AT_rich Low_complexity Low_complexity 1 30 0 237 159 0 0 chr2 71414896 71414940 -179272914 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 351 351 42 24 chr2 71415126 71415291 -179272563 - MIR3 SINE MIR -6 202 35 457 219 9 0 chr2 71415685 71415790 -179272064 - MER20 DNA MER1_type -78 141 36 843 199 14 54 chr2 71416207 71416428 -179271426 - MER20 DNA MER1_type -7 212 1 678 193 14 122 chr2 71417172 71417385 -179270469 + MER20 DNA MER1_type 29 218 -1 1216 219 132 15 chr2 71417671 71418004 -179269850 + MLT1A2 LTR MaLR 3 374 0 260 296 0 0 chr2 71418788 71418859 -179268995 - MIR SINE MIR -24 238 168 439 219 42 8 chr2 71419612 71419731 -179268123 + L2 LINE L2 3172 3294 -19 449 196 0 9 chr2 71419737 71419844 -179268010 + GA-rich Low_complexity Low_complexity 4 109 0 207 204 0 0 chr2 71419963 71420007 -179267847 + GA-rich Low_complexity Low_complexity 1 44 0 221 343 101 41 chr2 71420097 71420266 -179267588 - MIR3 SINE MIR -25 183 5 956 121 20 0 chr2 71420416 71420565 -179267289 - L1PA15 LINE L1 -1 6164 6013 180 293 27 53 chr2 71421251 71421326 -179266528 - MIR SINE MIR -102 160 88 400 349 60 0 chr2 71422408 71422557 -179265297 + L2 LINE L2 3115 3272 0 205 317 56 78 chr2 71422815 71422995 -179264859 - L3b LINE CR1 -134 1449 1274 1134 251 119 15 chr2 71423014 71423464 -179264390 - MLT1H LTR MaLR 0 549 1 196 362 0 0 chr2 71423578 71423636 -179264218 - L2 LINE L2 -2 3270 3213 431 204 120 0 chr2 71423847 71423955 -179263899 + MER5C DNA MER1_type 1 121 -203 192 177 190 76 chr2 71423981 71424060 -179263794 + MER5C DNA MER1_type 237 324 0 1217 204 97 44 chr2 71424113 71424452 -179263402 + MLT1D LTR MaLR 3 359 -146 6269 131 28 8 chr2 71427669 71429012 -179258842 - L1MA3 LINE L1 0 6305 4946 426 260 108 12 chr2 71429498 71429660 -179258194 - MIR3 SINE MIR -62 146 3 616 289 51 0 chr2 71430234 71430431 -179257423 - MIR SINE MIR -8 254 48 406 261 75 129 chr2 71430962 71431349 -179256505 - L2 LINE L2 -2 3270 2905 2370 112 50 0 chr2 71431475 71431832 -179256022 + THE1C LTR MaLR 1 375 0 251 293 124 91 chr2 71432255 71432733 -179255121 + L2 LINE L2 2581 3063 -209 231 301 12 92 chr2 71433695 71433868 -179253986 + LTR16C LTR ERVL 40 198 -293 362 353 38 0 chr2 71434330 71434463 -179253391 + MIR3 SINE MIR 69 206 -2 499 319 31 22 chr2 71435005 71435231 -179252623 + MIR SINE MIR 27 254 -8 512 274 140 22 chr2 71435288 71435467 -179252387 + MIR3 SINE MIR 7 206 -2 2453 71 0 0 chr2 71435713 71436010 -179251844 - AluY SINE Alu -4 307 11 350 220 59 42 chr2 71436612 71436730 -179251124 + MER117 DNA MER1_type 2 121 -76 611 210 28 14 chr2 71436832 71436975 -179250879 + MER58B DNA MER1_type 197 341 0 1303 164 84 3 chr2 71437627 71437926 -179249928 + MER33 DNA MER1_type 1 323 -1 21 0 0 0 chr2 71437935 71437956 -179249898 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 71438814 71438838 -179249016 + AT_rich Low_complexity Low_complexity 1 24 0 388 271 40 27 chr2 71440302 71440435 -179247419 - MIR SINE MIR -66 142 36 893 145 0 0 chr2 71440573 71440704 -179247150 - FLAM_C SINE Alu 0 133 3 2213 85 27 3 chr2 71440719 71441014 -179246840 - AluY SINE Alu -9 302 1 4944 189 21 24 chr2 71441018 71442545 -179245309 - L1MA10 LINE L1 -1 6333 4817 259 189 19 0 chr2 71442764 71442817 -179245037 - L2 LINE L2 -4 3268 3215 1849 169 6 31 chr2 71443220 71443539 -179244315 - AluJo SINE Alu 0 312 2 745 227 12 85 chr2 71444654 71444901 -179242953 - MLT1H1 LTR MaLR -1 554 326 263 268 0 0 chr2 71447520 71447591 -179240263 + T-rich Low_complexity Low_complexity 1 71 0 374 360 27 7 chr2 71448542 71448689 -179239165 + MIR3 SINE MIR 58 207 -1 22 70 0 0 chr2 71449097 71449140 -179238714 + AT_rich Low_complexity Low_complexity 1 43 0 236 246 0 0 chr2 71449237 71449302 -179238552 - HsTC2 DNA Tc2 -10 1888 1824 1513 220 99 19 chr2 71449343 71449757 -179238097 - HsTC2 DNA Tc2 -1444 454 8 222 281 31 31 chr2 71451002 71451066 -179236788 - L2 LINE L2 -102 3170 3107 212 303 84 49 chr2 71452383 71452525 -179235329 - MIR SINE MIR -3 259 113 339 277 50 8 chr2 71453558 71453677 -179234177 - MIR3 SINE MIR -2 206 83 194 192 19 0 chr2 71454050 71454102 -179233752 + (TA)n Simple_repeat Simple_repeat 2 54 0 246 277 60 12 chr2 71454580 71454663 -179233191 + MIR SINE MIR 63 149 -113 219 69 0 0 chr2 71454850 71454879 -179232975 + (A)n Simple_repeat Simple_repeat 1 29 0 501 231 84 21 chr2 71455426 71455569 -179232285 + MIR SINE MIR 111 262 0 21 0 0 0 chr2 71456817 71456838 -179231016 + AT_rich Low_complexity Low_complexity 1 21 0 204 449 8 0 chr2 71457432 71457550 -179230304 + MIR SINE MIR 34 152 -110 334 263 123 26 chr2 71458221 71458335 -179229519 + L2 LINE L2 3173 3297 -16 252 351 88 42 chr2 71458403 71458665 -179229189 + L3b LINE CR1 1102 1375 -208 433 275 148 7 chr2 71458779 71458945 -179228909 - MIR SINE MIR -31 231 43 21 0 0 0 chr2 71462941 71462962 -179224892 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 71465561 71465582 -179222272 + AT_rich Low_complexity Low_complexity 1 21 0 52 64 0 0 chr2 71465689 71465783 -179222071 + AT_rich Low_complexity Low_complexity 1 94 0 355 264 18 36 chr2 71465801 71465911 -179221943 - MIR SINE MIR -76 132 25 297 322 166 10 chr2 71466160 71466359 -179221495 + LTR16C LTR ERVL 254 483 -8 342 250 102 16 chr2 71467292 71467420 -179220434 - L2 LINE L2 -15 3298 3160 377 207 147 17 chr2 71467533 71467649 -179220205 + MER105 DNA DNA 71 201 -3 2073 131 68 0 chr2 71468350 71468701 -179219153 + THE1C LTR MaLR 1 375 0 364 293 53 0 chr2 71468768 71468918 -179218936 + L1MC5 LINE L1 7260 7417 -544 374 201 62 7 chr2 71469965 71470109 -179217745 + (TA)n Simple_repeat Simple_repeat 2 153 0 472 294 99 20 chr2 71470197 71470398 -179217456 + MIR SINE MIR 40 256 -6 258 32 0 0 chr2 71470637 71470668 -179217186 + (TA)n Simple_repeat Simple_repeat 1 31 0 23 33 0 0 chr2 71470680 71470710 -179217144 + AT_rich Low_complexity Low_complexity 1 30 0 1541 95 24 0 chr2 71470800 71471010 -179216844 + L1PA11 LINE L1 5953 6167 -7 22 56 0 0 chr2 71471014 71471050 -179216804 + AT_rich Low_complexity Low_complexity 1 36 0 400 322 17 0 chr2 71472624 71472742 -179215112 + MER58 DNA MER1_type 167 286 -2134 265 185 19 0 chr2 71472762 71472816 -179215038 + MER58 DNA MER1_type 2366 2420 0 364 344 69 45 chr2 71473032 71473279 -179214575 - L3 LINE CR1 -3 1574 1322 1803 124 57 3 chr2 71473318 71473600 -179214254 - AluSx SINE Alu -15 297 1 324 349 8 23 chr2 71473684 71473813 -179214041 + MIR3 SINE MIR 14 140 -68 605 294 67 0 chr2 71475059 71475239 -179212615 - MIR SINE MIR -54 208 17 448 207 179 55 chr2 71475320 71475465 -179212389 - L2 LINE L2 0 3313 3151 228 293 85 9 chr2 71476072 71476178 -179211676 + L2 LINE L2 3158 3271 -1 252 270 32 0 chr2 71476182 71476245 -179211609 + GA-rich Low_complexity Low_complexity 1 65 0 184 348 85 18 chr2 71476867 71477031 -179210823 - MIR3 SINE MIR -7 201 27 374 304 22 22 chr2 71477106 71477244 -179210610 + MIR SINE MIR 28 165 -97 1694 184 3 0 chr2 71477250 71477532 -179210322 + AluJb SINE Alu 7 289 -23 181 83 56 0 chr2 71477535 71477571 -179210283 + (TA)n Simple_repeat Simple_repeat 2 39 0 1705 191 6 13 chr2 71477735 71478049 -179209805 - AluJb SINE Alu 0 312 1 1913 126 55 3 chr2 71478257 71478550 -179209304 + AluJo SINE Alu 1 308 -4 218 289 72 26 chr2 71478649 71478801 -179209053 - L2 LINE L2 -160 3112 2954 909 234 44 8 chr2 71478984 71479232 -179208622 + MIR SINE MIR 2 258 -4 652 300 39 33 chr2 71479735 71480098 -179207756 - L1MC4a LINE L1 -1927 5881 5517 313 276 0 13 chr2 71480697 71480773 -179207081 + MIR SINE MIR 34 108 -154 642 224 144 23 chr2 71480786 71480960 -179206894 + MER3 DNA MER1_type 6 200 -9 281 318 0 12 chr2 71480970 71481055 -179206799 + MIR SINE MIR 112 195 -67 2111 114 37 0 chr2 71481055 71481352 -179206502 + AluSx SINE Alu 1 308 -4 214 205 0 0 chr2 71481380 71481419 -179206435 + (TA)n Simple_repeat Simple_repeat 2 40 0 269 275 0 43 chr2 71481420 71481489 -179206365 + MIR SINE MIR 197 262 0 247 296 102 23 chr2 71482592 71482680 -179205174 + L2 LINE L2 3177 3271 -1 582 55 91 7 chr2 71483703 71483984 -179203870 + (TA)n Simple_repeat Simple_repeat 1 304 0 1828 184 55 3 chr2 71483997 71484344 -179203510 + MLT1A1 LTR MaLR 1 365 0 559 121 36 0 chr2 71484388 71484528 -179203326 + (TA)n Simple_repeat Simple_repeat 2 146 0 1505 214 50 6 chr2 71484530 71484878 -179202976 - MLT1A1 LTR MaLR -3 454 1 1019 196 5 0 chr2 71485271 71485480 -179202374 - L1MB7 LINE L1 -14 6170 5961 1084 191 84 0 chr2 71485481 71485732 -179202122 - L1M4 LINE L1 -1430 4716 4445 2001 141 0 10 chr2 71485918 71486215 -179201639 + AluSx SINE Alu 1 294 -18 2267 112 0 0 chr2 71487171 71487476 -179200378 + AluSg SINE Alu 1 305 -5 941 301 23 12 chr2 71488877 71489136 -179198718 + MIR SINE MIR 1 262 0 32 0 0 0 chr2 71489933 71489965 -179197889 + AT_rich Low_complexity Low_complexity 1 32 0 240 318 167 0 chr2 71491026 71491152 -179196702 + MIR3 SINE MIR 32 178 -30 570 277 2 7 chr2 71491401 71491549 -179196305 - MIR SINE MIR -51 157 9 276 81 0 0 chr2 71493305 71493342 -179194512 + L2 LINE L2 3262 3298 -15 185 65 32 0 chr2 71493344 71493375 -179194479 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 802 178 27 16 chr2 71493690 71493875 -179193979 - MER53 DNA DNA -2 187 1 307 235 9 9 chr2 71494644 71494759 -179193095 + (TA)n Simple_repeat Simple_repeat 1 115 0 2316 57 0 3 chr2 71494799 71495081 -179192773 + AluY SINE Alu 1 281 -30 339 65 0 0 chr2 71495317 71495363 -179192491 + (TA)n Simple_repeat Simple_repeat 2 47 0 287 357 39 26 chr2 71495364 71495518 -179192336 - MIR SINE MIR -71 191 36 833 303 56 0 chr2 71495974 71496205 -179191649 + MIR SINE MIR 19 262 0 348 24 0 0 chr2 71496579 71496620 -179191234 + (TG)n Simple_repeat Simple_repeat 2 42 0 205 178 0 0 chr2 71498122 71498167 -179189687 + T-rich Low_complexity Low_complexity 2 46 0 23 0 0 0 chr2 71498263 71498286 -179189568 + AT_rich Low_complexity Low_complexity 1 23 0 433 302 17 11 chr2 71498692 71498871 -179188983 - L1ME LINE L1 -303 5818 5639 22 0 0 0 chr2 71501573 71501595 -179186259 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr2 71502659 71502684 -179185170 + AT_rich Low_complexity Low_complexity 1 25 0 207 328 0 16 chr2 71503231 71503295 -179184559 - MIR SINE MIR -164 98 36 836 303 56 0 chr2 71503751 71503982 -179183872 + MIR SINE MIR 19 262 0 348 24 0 0 chr2 71504356 71504397 -179183457 + (TG)n Simple_repeat Simple_repeat 2 42 0 205 178 0 0 chr2 71505899 71505944 -179181910 + T-rich Low_complexity Low_complexity 2 46 0 23 0 0 0 chr2 71506040 71506063 -179181791 + AT_rich Low_complexity Low_complexity 1 23 0 387 310 17 6 chr2 71506469 71506643 -179181211 - L1ME LINE L1 -303 5818 5643 22 0 0 0 chr2 71507983 71508005 -179179849 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr2 71509069 71509094 -179178760 + AT_rich Low_complexity Low_complexity 1 25 0 199 181 48 12 chr2 71509744 71509827 -179178027 + GA-rich Low_complexity Low_complexity 5 90 0 338 240 60 44 chr2 71510669 71510852 -179177002 + MER112 DNA MER1_type 69 254 -6 366 274 62 0 chr2 71511157 71511270 -179176584 - MIR SINE MIR -10 252 133 530 299 225 8 chr2 71511561 71511916 -179175938 - MLT1L LTR MaLR -94 521 90 462 172 0 20 chr2 71512636 71512735 -179175119 - L1MC4 LINE L1 -41 8001 7905 244 185 0 0 chr2 71512762 71512816 -179175038 + L1MC4 LINE L1 6652 6705 -1337 * 788 204 112 54 chr2 71512795 71513108 -179174746 - L1MC4 LINE L1 -124 7918 7588 21 0 0 0 chr2 71513635 71513656 -179174198 + AT_rich Low_complexity Low_complexity 1 21 0 1502 204 24 46 chr2 71515010 71515383 -179172471 + MLT1A1 LTR MaLR 1 365 0 1046 214 3 56 chr2 71515486 71515771 -179172083 + L1ME1 LINE L1 5337 5606 -560 1065 162 6 0 chr2 71515771 71515938 -179171916 + FRAM SINE Alu 2 169 -7 987 220 155 17 chr2 71515938 71516292 -179171562 + L1ME1 LINE L1 5596 5998 -168 970 151 35 47 chr2 71516292 71516464 -179171390 + AluJo SINE Alu 1 170 -142 2612 85 126 0 chr2 71516464 71516862 -179170992 + LTR7 LTR ERV1 1 448 -2 24601 93 46 11 chr2 71516864 71520722 -179167132 + HERVH LTR ERV1 1 3993 -3720 4059 151 1 1 chr2 71520724 71521386 -179166468 + HERVH LTR ERV1 4488 5149 -2564 1253 139 23 5 chr2 71521387 71521603 -179166251 + HERVH LTR ERV1 5600 5819 -1894 2007 112 56 6 chr2 71521603 71521671 -179166183 + HERVH LTR ERV1 7324 7387 -326 327 22 0 0 chr2 71521671 71521716 -179166138 - L1PA3 LINE L1 0 6155 6111 2007 112 56 6 chr2 71521716 71522005 -179165849 + HERVH LTR ERV1 7387 7699 -14 48 18 0 0 chr2 71522005 71522060 -179165794 + AT_rich Low_complexity Low_complexity 1 55 0 2670 69 120 22 chr2 71522071 71522479 -179165375 + LTR7 LTR ERV1 1 448 -2 684 189 8 0 chr2 71522481 71522603 -179165251 + AluJo SINE Alu 166 288 -24 487 197 21 12 chr2 71522672 71522804 -179165050 + L1ME1 LINE L1 6022 6148 -18 1453 210 141 46 chr2 71522852 71523313 -179164541 - MLT1D LTR MaLR 0 505 1 2699 156 7 5 chr2 71523502 71523933 -179163921 - MSTB1 LTR MaLR 0 432 1 975 261 17 0 chr2 71524145 71524379 -179163475 - MIR SINE MIR -21 241 4 251 292 0 31 chr2 71524380 71524476 -179163378 + GA-rich Low_complexity Low_complexity 3 95 0 339 267 327 0 chr2 71525884 71526034 -179161820 - MIR SINE MIR -6 256 58 306 375 94 4 chr2 71527838 71528073 -179159781 + L2 LINE L2 1843 2098 -1216 510 286 42 33 chr2 71528436 71528796 -179159058 + L1M4 LINE L1 2234 2596 -3550 27 29 0 0 chr2 71528997 71529031 -179158823 + AT_rich Low_complexity Low_complexity 1 34 0 370 242 72 66 chr2 71529038 71529526 -179158328 + L1M4 LINE L1 2904 3394 -2752 2413 93 0 0 chr2 71529719 71530019 -179157835 - AluSc SINE Alu -9 300 1 374 267 44 0 chr2 71530020 71530110 -179157744 - MIR3 SINE MIR -10 198 105 742 318 43 9 chr2 71530136 71530369 -179157485 - MIR SINE MIR -8 254 14 2220 96 4 0 chr2 71530553 71530834 -179157020 - AluSg SINE Alu -28 282 1 1888 191 69 43 chr2 71531059 71531551 -179156303 + MLT1D LTR MaLR 1 505 0 6846 138 22 12 chr2 71531743 71532955 -179154899 - Tigger3b DNA MER2_type 0 1231 7 340 312 123 0 chr2 71533102 71533240 -179154614 - MIR SINE MIR -51 211 57 310 268 125 18 chr2 71533478 71533590 -179154264 + MIR3 SINE MIR 83 206 -2 24 53 0 0 chr2 71533883 71533921 -179153933 + AT_rich Low_complexity Low_complexity 1 38 0 2581 112 11 8 chr2 71533926 71534300 -179153554 - THE1C LTR MaLR 0 375 1 10040 120 43 3 chr2 71534302 71535818 -179152036 - THE1C-int LTR MaLR -3 1577 1 2121 122 28 19 chr2 71535818 71536178 -179151676 - THE1C LTR MaLR 0 375 13 414 0 0 0 chr2 71536224 71536270 -179151584 + (CA)n Simple_repeat Simple_repeat 2 47 0 266 226 46 31 chr2 71537157 71537281 -179150573 + L1ME LINE L1 5511 5634 -487 306 134 0 0 chr2 71537739 71537806 -179150048 + (TCTCTG)n Simple_repeat Simple_repeat 2 68 0 198 0 0 0 chr2 71537808 71537830 -179150024 + (CA)n Simple_repeat Simple_repeat 1 22 0 337 296 14 35 chr2 71538013 71538155 -179149699 - MLT1I LTR MaLR -191 218 80 1409 195 89 11 chr2 71538484 71538766 -179149088 + AluJo SINE Alu 1 304 -8 1820 161 3 17 chr2 71539296 71539594 -179148260 - AluSx SINE Alu -14 298 5 1092 282 33 41 chr2 71540515 71540934 -179146920 - L2 LINE L2 -3 3310 2895 41745 39 1 9 chr2 71540939 71547166 -179140688 + L1PA3 LINE L1 1 6181 0 749 290 82 29 chr2 71547188 71547467 -179140387 - L2 LINE L2 -433 2881 2588 4120 190 66 30 chr2 71547485 71548529 -179139325 - Tigger6a DNA MER2_type 0 1083 2 188 328 66 16 chr2 71548647 71548708 -179139146 + L2 LINE L2 3138 3201 -71 579 273 47 17 chr2 71548740 71548912 -179138942 - MIR SINE MIR -74 188 12 22 0 0 0 chr2 71549826 71549848 -179138006 + AT_rich Low_complexity Low_complexity 1 22 0 1151 269 102 12 chr2 71550656 71551068 -179136786 + HAL1 LINE L1 13 461 -2046 510 237 113 49 chr2 71551086 71551432 -179136422 + HAL1 LINE L1 820 1187 -1320 865 241 110 46 chr2 71551468 71551903 -179135951 - HAL1 LINE L1 -20 2487 2025 * 3790 214 38 1 chr2 71551893 71552709 -179135145 - L1ME1 LINE L1 -1 6976 6131 2012 220 41 99 chr2 71552710 71553369 -179134485 - MLT1E2 LTR MaLR 0 626 6 1703 182 10 16 chr2 71553377 71553554 -179134300 - AluJo SINE Alu -6 306 130 345 24 0 0 chr2 71553554 71553596 -179134258 + (TTG)n Simple_repeat Simple_repeat 2 43 0 1703 182 10 16 chr2 71553596 71553726 -179134128 - AluJo SINE Alu -182 130 1 344 173 0 0 chr2 71553737 71553812 -179134042 - L1ME1 LINE L1 -804 6128 6054 289 246 0 14 chr2 71553818 71553887 -179133967 - MER58 DNA MER1_type 0 2420 2353 576 204 17 3 chr2 71553891 71554009 -179133845 - MER58 DNA MER1_type -107 108 2 340 179 0 26 chr2 71554010 71554088 -179133766 - L1ME1 LINE L1 -902 6055 5980 515 256 30 23 chr2 71554088 71554221 -179133633 + MLT1E LTR MaLR 1 134 -459 988 228 108 8 chr2 71554348 71554598 -179133256 + MLT1E LTR MaLR 317 591 -2 5520 242 50 27 chr2 71554600 71555347 -179132507 - L1ME1 LINE L1 -973 5984 5255 1721 151 37 0 chr2 71555347 71555658 -179132196 - AluSx SINE Alu 0 321 1 5520 242 50 27 chr2 71555658 71556701 -179131153 - L1ME1 LINE L1 -1702 5255 4153 * 7008 34 4 59 chr2 71556696 71557650 -179130204 - L1PA4 LINE L1 0 6155 5254 3351 40 0 2 chr2 71557648 71558074 -179129780 + L1P LINE L1 1986 2410 -3736 * 331 277 18 53 chr2 71558639 71558856 -179128998 - L1ME1 LINE L1 -6321 534 20 311 384 62 5 chr2 71559007 71559218 -179128636 - HAL1 LINE L1 -592 1915 1693 257 310 54 33 chr2 71560014 71560198 -179127656 + Charlie4 DNA MER1_type 518 705 -1256 189 0 0 0 chr2 71560484 71560505 -179127349 + (TTG)n Simple_repeat Simple_repeat 1 21 0 5773 155 12 37 chr2 71560896 71561422 -179126432 - L1MA10 LINE L1 -1 6333 5795 2048 132 13 3 chr2 71561422 71561725 -179126129 - AluSq SINE Alu -7 306 1 5773 155 12 37 chr2 71561725 71562495 -179125359 - L1MA10 LINE L1 -539 5795 5070 525 189 135 0 chr2 71562842 71562953 -179124901 + FLAM_A SINE Alu 1 126 -7 556 283 74 75 chr2 71563466 71563793 -179124061 + L1M4 LINE L1 2741 3068 -3078 1652 169 52 85 chr2 71563793 71564168 -179123686 + MSTB1 LTR MaLR 3 362 -70 1876 158 0 13 chr2 71564168 71564478 -179123376 - AluSx SINE Alu -6 306 1 1652 169 52 85 chr2 71564478 71564547 -179123307 + MSTB1 LTR MaLR 362 432 0 556 283 74 75 chr2 71564547 71564749 -179123105 + L1M4 LINE L1 3068 3269 -2877 2375 79 0 25 chr2 71564798 71565114 -179122740 + AluY SINE Alu 1 308 -3 386 318 71 35 chr2 71565349 71565519 -179122335 + MIR SINE MIR 77 252 -10 2254 101 3 10 chr2 71565787 71566094 -179121760 - AluSq SINE Alu -8 305 1 1862 174 60 50 chr2 71566144 71566625 -179121229 - MER31A LTR ERV1 0 661 2 2239 103 0 3 chr2 71567079 71567380 -179120474 - THE1B LTR MaLR 0 364 65 986 195 11 16 chr2 71567432 71567622 -179120232 + MER5A DNA MER1_type 1 189 0 249 243 0 0 chr2 71567770 71567840 -179120014 + (TA)n Simple_repeat Simple_repeat 1 70 0 3420 201 46 31 chr2 71568209 71568243 -179119611 + MER63C DNA MER1_type 2 34 -1026 5883 15 6 3 chr2 71568243 71568926 -179118928 + L1PA3 LINE L1 5471 6155 0 3420 201 46 31 chr2 71568926 71569722 -179118132 + MER63C DNA MER1_type 34 844 -86 2566 136 39 5 chr2 71569815 71570227 -179117627 + MSTB LTR MaLR 1 426 0 710 294 37 20 chr2 71570637 71570882 -179116972 - MIR SINE MIR 0 262 14 370 253 0 0 chr2 71570988 71571075 -179116779 - MER94 DNA DNA -38 96 10 2173 99 0 7 chr2 71571693 71571995 -179115859 - AluSc SINE Alu -9 300 1 312 70 0 0 chr2 71572480 71572523 -179115331 + (TG)n Simple_repeat Simple_repeat 2 44 0 1499 146 3 82 chr2 71572813 71573183 -179114671 - AluJo SINE Alu 0 367 21 21 57 0 0 chr2 71573353 71573388 -179114466 + AT_rich Low_complexity Low_complexity 1 35 0 351 214 82 31 chr2 71573724 71573822 -179114032 - MER5A DNA MER1_type -77 112 10 226 287 21 21 chr2 71575146 71575240 -179112614 + L3 LINE CR1 1150 1243 -334 600 214 100 0 chr2 71575240 71575380 -179112474 - MER63 DNA MER1_type 0 1062 909 338 224 13 0 chr2 71575381 71575457 -179112397 + L1MA10 LINE L1 6169 6245 -89 311 129 48 0 chr2 71575630 71575692 -179112162 - L1ME4a LINE L1 -3 6118 6054 23 45 0 60 chr2 71575849 71575916 -179111938 + AT_rich Low_complexity Low_complexity 1 63 0 735 223 96 6 chr2 71576017 71576174 -179111680 - MER5A DNA MER1_type -1 188 18 1396 257 100 74 chr2 71579178 71579714 -179108140 - L1ME3A LINE L1 0 6170 5650 1594 148 95 7 chr2 71579714 71579997 -179107857 - AluJo SINE Alu 0 312 5 1396 257 100 74 chr2 71579997 71581110 -179106744 - L1ME3A LINE L1 -520 5650 4475 1347 61 6 0 chr2 71581119 71581284 -179106570 - AluSg/x SINE Alu -16 293 128 225 0 0 0 chr2 71581284 71581309 -179106545 + (TATG)n Simple_repeat Simple_repeat 2 26 0 390 138 0 0 chr2 71581316 71581381 -179106473 - AluSg/x SINE Alu -17 283 219 1918 80 0 4 chr2 71581381 71581630 -179106224 - AluSg SINE Alu -62 248 1 352 244 119 39 chr2 71581635 71581848 -179106006 - L1 LINE L1 -1674 4472 4244 2188 66 22 47 chr2 71583167 71583486 -179104368 - AluY SINE Alu 0 311 1 309 315 7 57 chr2 71584932 71585100 -179102754 + MIR SINE MIR 38 196 -66 483 172 0 46 chr2 71585198 71585285 -179102569 + AluJ/FLAM SINE Alu 4 86 -226 201 309 186 10 chr2 71586790 71586887 -179100967 - L2 LINE L2 -12 3260 3147 24 53 0 0 chr2 71587438 71587476 -179100378 + AT_rich Low_complexity Low_complexity 1 38 0 372 226 0 0 chr2 71590413 71590475 -179097379 + L2 LINE L2 3205 3266 -6 491 319 159 48 chr2 71590714 71591270 -179096584 + L2 LINE L2 2458 3072 -241 225 196 0 0 chr2 71591563 71591609 -179096245 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 706 284 104 9 chr2 71591642 71591970 -179095884 - L1MC4a LINE L1 -1902 5906 5548 1557 110 26 18 chr2 71592007 71592235 -179095619 + MER30 DNA MER1_type 1 230 0 2356 144 45 26 chr2 71592381 71592805 -179095049 - Tigger2a DNA MER2_type -1 433 2 1267 205 60 30 chr2 71593087 71593418 -179094436 + MER58B DNA MER1_type 1 341 0 193 222 42 111 chr2 71593856 71593928 -179093926 - MER5A DNA MER1_type -24 165 99 262 318 0 0 chr2 71595566 71595629 -179092225 - MIR3 SINE MIR -21 187 125 1823 172 150 0 chr2 71596191 71596552 -179091302 - MER47B DNA MER2_type 0 418 4 241 231 51 0 chr2 71596995 71597073 -179090781 + MER113 DNA MER1_type? 45 126 -395 381 304 131 6 chr2 71598030 71598198 -179089656 - MIR SINE MIR -73 189 1 1541 202 141 17 chr2 71598654 71599114 -179088740 - Charlie1 DNA MER1_type -4 2757 2241 234 250 58 48 chr2 71599114 71599218 -179088636 + L1MEc LINE L1 63 167 -6229 * 2740 241 78 27 chr2 71599216 71599416 -179088438 + L1MEc LINE L1 1751 1939 -4276 4125 191 94 8 chr2 71599416 71600412 -179087442 + Tigger6a DNA MER2_type 2 1083 0 2740 241 78 27 chr2 71600412 71601596 -179086258 + L1MEc LINE L1 1939 3245 -2970 624 252 0 0 chr2 71601596 71601715 -179086139 + FLAM_A SINE Alu 1 119 -14 2740 241 78 27 chr2 71601715 71602017 -179085837 + L1MEc LINE L1 3245 3530 -2685 1889 201 27 23 chr2 71602053 71602070 -179085784 + L1MB8 LINE L1 4855 4870 -1276 1149 209 212 12 chr2 71602070 71602400 -179085454 - MSTD LTR MaLR 0 396 1 1889 201 27 23 chr2 71602400 71602859 -179084995 + L1MB8 LINE L1 4870 5333 -813 2137 136 105 10 chr2 71602862 71603253 -179084601 - MSTA LTR MaLR 0 428 1 3905 128 24 14 chr2 71603253 71603892 -179083962 - MSTA-int LTR MaLR 0 1580 936 1778 173 78 58 chr2 71603947 71604148 -179083706 - MSTB1 LTR MaLR -13 419 223 1465 207 57 0 chr2 71604148 71604263 -179083591 + AluJb SINE Alu 1 108 -204 477 0 0 0 chr2 71604263 71604316 -179083538 + (CA)n Simple_repeat Simple_repeat 2 54 0 1465 207 57 0 chr2 71604316 71604480 -179083374 + AluJb SINE Alu 108 296 -16 1778 173 78 58 chr2 71604480 71604689 -179083165 - MSTB1 LTR MaLR -209 223 1 288 235 165 0 chr2 71604689 71604774 -179083080 + L1MB8 LINE L1 5480 5581 -581 434 217 36 116 chr2 71604780 71604990 -179082864 + L1MB8 LINE L1 5921 6105 -73 788 163 8 0 chr2 71604990 71605119 -179082735 - FLAM_C SINE Alu -3 130 1 434 217 36 116 chr2 71605119 71605184 -179082670 + L1MB8 LINE L1 6105 6174 -4 2653 204 85 17 chr2 71605192 71605888 -179081966 - Charlie1 DNA MER1_type -499 2262 1520 * 5229 118 9 19 chr2 71605884 71606662 -179081192 + Tigger1 DNA MER2_type 1444 2216 -202 1789 143 37 0 chr2 71606662 71607001 -179080853 - AluSx SINE Alu 0 349 1 5229 118 9 19 chr2 71607001 71607066 -179080788 + Tigger1 DNA MER2_type 2216 2280 -138 980 164 0 0 chr2 71607131 71607283 -179080571 + Tigger1 DNA MER2_type 2267 2418 0 21 0 0 0 chr2 71607301 71607322 -179080532 + AT_rich Low_complexity Low_complexity 1 21 0 1729 261 84 62 chr2 71607546 71608079 -179079775 - L1ME LINE L1 -4821 2120 1600 2171 117 0 19 chr2 71608079 71608396 -179079458 - AluSx SINE Alu 0 312 2 1729 261 84 62 chr2 71608396 71609045 -179078809 - L1ME LINE L1 -5341 1600 918 768 185 8 0 chr2 71609359 71609489 -179078365 + FLAM_A SINE Alu 1 131 -2 2086 155 0 0 chr2 71609856 71610166 -179077688 - AluSx SINE Alu 0 312 3 25 0 0 0 chr2 71610232 71610257 -179077597 + AT_rich Low_complexity Low_complexity 1 25 0 28 79 0 0 chr2 71610346 71610409 -179077445 + AT_rich Low_complexity Low_complexity 1 63 0 1167 112 6 0 chr2 71610559 71610728 -179077126 - L1PA10 LINE L1 -1 6167 5998 1449 107 0 0 chr2 71611160 71611347 -179076507 + AluSx SINE Alu 1 187 -125 29 28 0 0 chr2 71611386 71611422 -179076432 + AT_rich Low_complexity Low_complexity 1 36 0 305 27 0 0 chr2 71612414 71612451 -179075403 - L1PA10 LINE L1 -298 5856 5820 438 261 30 98 chr2 71612451 71612654 -179075200 + MLT1K LTR MaLR 289 477 -111 23 78 0 0 chr2 71612658 71612709 -179075145 + AT_rich Low_complexity Low_complexity 1 51 0 490 215 54 0 chr2 71612849 71612979 -179074875 + Tigger8 DNA MER2_type 170 306 -360 25 0 0 0 chr2 71613013 71613038 -179074816 + AT_rich Low_complexity Low_complexity 1 25 0 2220 93 31 0 chr2 71613040 71613331 -179074523 - AluSg SINE Alu -10 300 1 260 143 41 0 chr2 71613649 71613698 -179074156 + MLT1J LTR MaLR 424 474 -37 522 319 91 42 chr2 71613720 71613800 -179074054 - L1M4 LINE L1 -2254 3892 3817 3075 164 35 12 chr2 71613800 71614391 -179073463 + MER6A DNA MER2_type 1 605 0 522 319 91 42 chr2 71614391 71614759 -179073095 - L1M4 LINE L1 -2329 3817 3422 413 243 77 77 chr2 71614761 71614986 -179072868 + L1MEc LINE L1 1844 2071 -4325 1511 195 13 20 chr2 71614986 71615284 -179072570 - AluJo SINE Alu -16 296 1 413 243 77 77 chr2 71615284 71615437 -179072417 + L1MEc LINE L1 2070 2222 -4174 * 759 227 87 0 chr2 71615433 71615640 -179072214 - L1ME LINE L1 -6168 255 31 382 338 84 28 chr2 71615665 71615949 -179071905 - L1M4 LINE L1 -3644 2502 2203 317 247 43 49 chr2 71616377 71616539 -179071315 - HAL1b LINE L1 -467 881 721 440 234 68 73 chr2 71616606 71616798 -179071056 - HAL1b LINE L1 -744 604 414 1819 131 3 44 chr2 71616896 71617213 -179070641 - AluSx SINE Alu 0 307 3 225 253 18 53 chr2 71617375 71617545 -179070309 + T-rich Low_complexity Low_complexity 3 166 0 22 35 0 0 chr2 71618649 71618678 -179069176 + AT_rich Low_complexity Low_complexity 1 29 0 643 300 92 4 chr2 71618765 71619015 -179068839 + Tigger8 DNA MER2_type 37 308 -358 374 226 212 34 chr2 71620507 71620653 -179067201 + MER5B DNA MER1_type 7 178 0 362 224 0 0 chr2 71620968 71621035 -179066819 + MLT1F1 LTR MaLR 1 67 -475 266 211 18 0 chr2 71621037 71621094 -179066760 + CT-rich Low_complexity Low_complexity 1 58 0 904 191 178 4 chr2 71621131 71621361 -179066493 + MLT1F1 LTR MaLR 177 446 -121 183 156 0 0 chr2 71624156 71624188 -179063666 + (CAT)n Simple_repeat Simple_repeat 3 34 0 2186 122 0 0 chr2 71624501 71624796 -179063058 + AluSx SINE Alu 1 295 -17 28 48 0 0 chr2 71624901 71624943 -179062911 + AT_rich Low_complexity Low_complexity 1 42 0 569 305 76 27 chr2 71625222 71625445 -179062409 + MIR SINE MIR 29 262 0 849 334 62 22 chr2 71625485 71626018 -179061836 + L2 LINE L2 2424 2977 -337 61 27 0 0 chr2 71626026 71626101 -179061753 + AT_rich Low_complexity Low_complexity 1 75 0 248 175 53 0 chr2 71626101 71626158 -179061696 - L1MA1 LINE L1 0 6302 6243 678 307 61 4 chr2 71626836 71627067 -179060787 + MIR SINE MIR 8 251 -11 318 307 131 27 chr2 71627140 71627714 -179060140 + L1ME LINE L1 5037 5682 -480 928 278 42 34 chr2 71627726 71628079 -179059775 - MLT1I LTR MaLR 0 409 54 3740 202 23 44 chr2 71628494 71629396 -179058458 - MLT1D-int LTR MaLR -488 883 1 1079 171 66 86 chr2 71629396 71629653 -179058201 - MLT1D LTR MaLR 0 505 216 309 296 72 42 chr2 71629817 71630081 -179057773 - L1ME LINE L1 -303 5818 5547 313 271 42 76 chr2 71632864 71633008 -179054846 + MIR SINE MIR 48 186 -76 23 54 0 0 chr2 71633018 71633055 -179054799 + AT_rich Low_complexity Low_complexity 1 37 0 301 178 52 22 chr2 71633212 71633347 -179054507 + (TA)n Simple_repeat Simple_repeat 1 139 0 1502 231 79 92 chr2 71634116 71634203 -179053651 + MLT1G LTR MaLR 30 117 -473 1589 195 276 32 chr2 71634203 71634771 -179053083 + MER39 LTR ERV1 1 707 0 1502 231 79 92 chr2 71634771 71634899 -179052955 + MLT1G LTR MaLR 117 245 -345 2274 94 0 7 chr2 71634899 71635207 -179052647 + AluSc SINE Alu 3 308 -1 1502 231 79 92 chr2 71635207 71635558 -179052296 + MLT1G LTR MaLR 245 590 0 3868 171 94 37 chr2 71635574 71636383 -179051471 - MER21B LTR ERV1 -3 860 6 894 254 14 65 chr2 71636392 71636668 -179051186 + MLT1H LTR MaLR 111 372 -177 24 32 0 0 chr2 71636732 71636763 -179051091 + AT_rich Low_complexity Low_complexity 1 31 0 729 176 21 14 chr2 71636763 71636905 -179050949 - FRAM SINE Alu -33 143 1 934 304 57 9 chr2 71636994 71637329 -179050525 + L2 LINE L2 1712 2062 -1252 2299 114 3 0 chr2 71637332 71637638 -179050216 - AluSp SINE Alu -6 307 1 1467 246 55 18 chr2 71637711 71638093 -179049761 - L2 LINE L2 -14 3299 2904 185 100 50 0 chr2 71638173 71638213 -179049641 + A-rich Low_complexity Low_complexity 2 43 0 823 276 61 67 chr2 71638408 71638853 -179049001 + L2 LINE L2 2154 2595 -719 333 47 0 0 chr2 71638991 71639034 -179048820 + (TA)n Simple_repeat Simple_repeat 1 43 0 2342 97 0 0 chr2 71642884 71643183 -179044671 - AluSx SINE Alu -13 299 1 1803 124 3 75 chr2 71644074 71644407 -179043447 - AluSx SINE Alu 0 311 1 384 321 8 15 chr2 71646247 71646378 -179041476 + MIR SINE MIR 20 149 -113 252 0 0 0 chr2 71646378 71646406 -179041448 + (TC)n Simple_repeat Simple_repeat 2 29 0 207 0 0 0 chr2 71646405 71646428 -179041426 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 333 0 0 0 chr2 71646427 71646464 -179041390 + (TG)n Simple_repeat Simple_repeat 2 38 0 668 228 175 21 chr2 71646572 71646761 -179041093 - MIR SINE MIR -31 231 14 233 250 0 0 chr2 71646794 71646846 -179041008 + (TTA)n Simple_repeat Simple_repeat 1 52 0 953 192 0 6 chr2 71647223 71647390 -179040464 + FAM SINE Alu 1 42 -7 180 0 0 0 chr2 71650462 71650482 -179037372 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 780 214 31 54 chr2 71650851 71650985 -179036869 + MIR SINE MIR 15 144 -118 2324 88 0 3 chr2 71650985 71651280 -179036574 + AluY SINE Alu 1 294 -17 780 214 31 54 chr2 71651280 71651369 -179036485 + MIR SINE MIR 144 233 -29 221 154 0 0 chr2 71651645 71651684 -179036170 + (TG)n Simple_repeat Simple_repeat 2 40 0 371 364 118 14 chr2 71652145 71652425 -179035429 + L2 LINE L2 2576 2884 -430 2174 83 0 0 chr2 71652571 71652868 -179034986 + AluSc SINE Alu 15 311 0 1898 163 0 23 chr2 71655062 71655368 -179032486 - AluSx SINE Alu -13 299 1 213 224 0 0 chr2 71656306 71656355 -179031499 + (CAT)n Simple_repeat Simple_repeat 1 49 0 382 322 7 14 chr2 71657600 71657746 -179030108 - MER5A DNA MER1_type -41 148 4 210 263 92 26 chr2 71657891 71657967 -179029887 - MIR SINE MIR -84 124 44 2282 97 0 3 chr2 71658784 71659093 -179028761 - AluY SINE Alu -3 308 1 315 296 163 10 chr2 71660204 71660400 -179027454 - MIR SINE MIR -36 226 1 21 36 0 0 chr2 71660527 71660555 -179027299 + AT_rich Low_complexity Low_complexity 1 28 0 274 258 0 0 chr2 71661744 71661806 -179026048 + (TG)n Simple_repeat Simple_repeat 1 62 0 200 158 35 70 chr2 71663283 71663340 -179024514 - MIR3 SINE MIR -16 192 138 2290 108 0 0 chr2 71663788 71664083 -179023771 - AluSg SINE Alu -15 295 1 334 205 118 31 chr2 71665717 71665844 -179022010 + L1ME LINE L1 5689 5826 -295 6402 24 0 4 chr2 71665844 71666685 -179021169 + L1PA3 LINE L1 5203 6040 -115 2491 46 0 16 chr2 71666785 71667108 -179020746 + L1PA3 LINE L1 5835 6152 -3 14575 137 25 1 chr2 71667258 71669618 -179018236 + Tigger1 DNA MER2_type 1 2417 -1 1718 154 9 42 chr2 71669672 71670003 -179017851 + MER7A DNA MER2_type 28 345 -1 1607 185 0 32 chr2 71670031 71670344 -179017510 + AluJo SINE Alu 1 303 -9 243 88 0 0 chr2 71670441 71670475 -179017379 + (A)n Simple_repeat Simple_repeat 1 34 0 226 277 62 0 chr2 71670582 71670647 -179017207 + LTR67 LTR ERVL 85 153 -404 * 268 167 21 0 chr2 71670609 71670657 -179017197 + MLT1J LTR MaLR 110 158 -353 222 37 0 0 chr2 71671019 71671046 -179016808 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr2 71671130 71671151 -179016703 + AT_rich Low_complexity Low_complexity 1 21 0 921 176 29 29 chr2 71671226 71671431 -179016423 - L1MB8 LINE L1 -1 6177 5973 332 276 52 15 chr2 71671434 71671568 -179016286 - L1MB8 LINE L1 -1983 5825 5687 313 282 14 84 chr2 71671664 71671806 -179016048 + MER91A DNA MER1_type 22 153 -43 761 321 4 33 chr2 71671892 71671923 -179015931 - L2 LINE L2 -455 2859 2829 2154 120 35 41 chr2 71671923 71672289 -179015565 + THE1B LTR MaLR 1 364 0 761 321 4 33 chr2 71672289 71672528 -179015326 - L2 LINE L2 -485 2829 2597 1360 237 62 54 chr2 71673020 71673517 -179014337 + MLT1D LTR MaLR 5 505 0 239 289 86 39 chr2 71673849 71673977 -179013877 + MIR SINE MIR 78 211 -51 297 240 173 10 chr2 71674130 71674234 -179013620 - MIR SINE MIR -13 249 129 291 193 18 18 chr2 71674234 71674291 -179013563 + L2 LINE L2 3237 3293 -20 223 310 84 0 chr2 71675899 71675970 -179011884 - MIR SINE MIR -85 123 47 207 0 0 0 chr2 71676808 71676831 -179011023 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 401 273 7 14 chr2 71676967 71677110 -179010744 - MER69 DNA AcHobo -5 2521 2380 2107 114 24 3 chr2 71677227 71677517 -179010337 - AluSc SINE Alu -9 300 5 359 323 26 19 chr2 71677933 71678088 -179009766 + MIR SINE MIR 61 216 -46 503 287 15 46 chr2 71678586 71678781 -179009073 + MIR SINE MIR 40 228 -34 1056 188 31 45 chr2 71678972 71679195 -179008659 - AluJo SINE Alu -10 302 83 2550 40 0 40 chr2 71679522 71679845 -179008009 + AluY SINE Alu 1 310 -1 203 174 0 43 chr2 71680433 71680479 -179007375 + G-rich Low_complexity Low_complexity 4 47 0 264 243 57 14 chr2 71684721 71684791 -179003063 - L2 LINE L2 -16 3297 3225 214 191 0 95 chr2 71685207 71685270 -179002584 + L2 LINE L2 3201 3257 -56 1814 160 52 19 chr2 71686650 71687013 -179000841 + THE1C LTR MaLR 1 375 0 1197 208 50 26 chr2 71688904 71689207 -178998647 + MER2 DNA MER2_type 35 344 -1 2757 85 3 0 chr2 71689242 71689596 -178998258 + THE1A LTR MaLR 1 355 0 865 166 69 37 chr2 71690081 71690298 -178997556 + THE1C LTR MaLR 1 224 -151 9649 30 3 0 chr2 71690322 71692245 -178995609 - L1PA4 LINE L1 -1 6154 4229 10468 35 0 1 chr2 71692245 71693580 -178994274 + L1PA4 LINE L1 2907 4239 -1907 893 124 4 14 chr2 71693581 71693727 -178994127 + THE1C LTR MaLR 237 373 -2 204 264 92 11 chr2 71694412 71694499 -178993355 + L2 LINE L2 3164 3257 -56 593 206 0 0 chr2 71694719 71694826 -178993028 + Tigger3(Golem) DNA MER2_type 1 107 -2922 3804 138 34 16 chr2 71694831 71695563 -178992291 + Tigger3(Golem) DNA MER2_type 2284 3028 -1 214 186 0 0 chr2 71696364 71696407 -178991447 + (TAA)n Simple_repeat Simple_repeat 2 44 0 1449 172 88 37 chr2 71697957 71698254 -178989600 + AluJb SINE Alu 1 312 0 206 357 122 0 chr2 71698325 71698423 -178989431 - L3 LINE CR1 -39 1538 1429 1399 153 18 25 chr2 71698609 71698883 -178988971 - MER2 DNA MER2_type -23 322 51 1980 130 50 10 chr2 71699385 71699686 -178988168 + AluSp SINE Alu 1 313 0 292 300 0 0 chr2 71702862 71702962 -178984892 + LTR58 LTR ERV1 350 449 -230 2097 166 82 7 chr2 71703271 71703700 -178984154 - LOR1b LTR ERV1 0 461 1 1951 146 3 3 chr2 71703746 71704033 -178983821 - AluJo SINE Alu -25 287 1 830 249 82 9 chr2 71704150 71704383 -178983471 - MIR SINE MIR -11 251 2 207 0 0 0 chr2 71704780 71704803 -178983051 + (CA)n Simple_repeat Simple_repeat 2 24 0 583 220 101 0 chr2 71705156 71705324 -178982530 - L1MD3 LINE L1 -17 7978 7794 191 36 36 0 chr2 71707335 71707363 -178980491 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 239 224 106 47 chr2 71707822 71707907 -178979947 - L2 LINE L2 -24 3289 3200 244 371 132 0 chr2 71710151 71710310 -178977544 - MIR SINE MIR -73 189 10 26 30 0 0 chr2 71710411 71710444 -178977410 + AT_rich Low_complexity Low_complexity 1 33 0 248 111 22 0 chr2 71710686 71710731 -178977123 + T-rich Low_complexity Low_complexity 4 49 0 4253 181 50 19 chr2 71711982 71713549 -178974305 + L1MC1 LINE L1 4427 6042 -291 467 176 134 55 chr2 71713693 71713857 -178973997 + MER66A LTR ERV1 97 263 -223 2270 95 0 0 chr2 71713887 71714183 -178973671 + AluY SINE Alu 7 302 -9 1616 159 7 21 chr2 71714187 71714398 -178973456 + L1MC1 LINE L1 6041 6248 -85 2251 90 96 12 chr2 71714398 71714438 -178973416 - THE1B LTR MaLR -1 363 328 1591 124 0 9 chr2 71714438 71714664 -178973190 + AluSg/x SINE Alu 85 308 -2 2251 90 96 12 chr2 71714664 71714958 -178972896 - THE1B LTR MaLR -36 328 1 1616 159 7 21 chr2 71714958 71715036 -178972818 + L1MC1 LINE L1 6248 6326 -7 5727 187 61 16 chr2 71715262 71716646 -178971208 + Charlie1a DNA MER1_type 6 1452 -3 814 301 28 15 chr2 71716905 71717230 -178970624 - LTR16C LTR ERVL 0 491 163 381 319 11 0 chr2 71717391 71717576 -178970278 - L1ME3A LINE L1 -254 5916 5730 463 309 106 32 chr2 71717835 71718178 -178969676 + L1MC4a LINE L1 5571 5941 -229 320 169 48 16 chr2 71718192 71718316 -178969538 + (TA)n Simple_repeat Simple_repeat 1 128 0 746 147 6 0 chr2 71718431 71718588 -178969266 + (TAGA)n Simple_repeat Simple_repeat 4 161 0 736 349 130 36 chr2 71718940 71720175 -178967679 + L2 LINE L2 1534 2884 -430 193 304 54 0 chr2 71720281 71720337 -178967517 + L2 LINE L2 3118 3176 -96 657 223 30 6 chr2 71720740 71720906 -178966948 + MIR SINE MIR 93 262 0 12965 205 21 22 chr2 71721299 71721761 -178966093 - L1PB3 LINE L1 -2 6209 5748 2230 116 52 84 chr2 71721761 71722201 -178965653 + MSTA LTR MaLR 3 428 0 12965 205 21 22 chr2 71722201 71725708 -178962146 - L1PB3 LINE L1 -463 5748 2178 1373 223 27 27 chr2 71725708 71726008 -178961846 - AluJo SINE Alu -12 300 1 12965 205 21 22 chr2 71726008 71728183 -178959671 - L1PB3 LINE L1 -4033 2178 2 562 250 17 33 chr2 71728184 71728364 -178959490 - L1PA15-16 LINE L1 -5259 1591 1415 245 336 9 2 chr2 71728695 71728840 -178959014 - L1M2b LINE L1 -6694 515 21 * 912 312 54 59 chr2 71728837 71730411 -178957443 - L1PA15-16 LINE L1 -5419 1430 3 2687 113 0 0 chr2 71730479 71730843 -178957011 - THE1B LTR MaLR 0 364 1 10650 107 36 8 chr2 71730843 71732379 -178955475 - THE1B-int LTR MaLR 0 1580 1 2650 115 0 0 chr2 71732379 71732743 -178955111 - THE1B LTR MaLR 0 364 1 2142 98 0 7 chr2 71734691 71735016 -178952838 - AluSx SINE Alu 0 323 1 696 302 5 15 chr2 71735258 71735460 -178952394 - MIR SINE MIR -48 214 15 471 231 10 0 chr2 71736064 71736168 -178951686 - L2 LINE L2 -1039 2275 2171 423 218 82 45 chr2 71736335 71736445 -178951409 + L2 LINE L2 3200 3313 0 333 297 29 22 chr2 71736505 71736643 -178951211 - L2 LINE L2 0 3313 3175 542 262 27 22 chr2 71736681 71736864 -178950990 + LTR16A1 LTR ERVL 274 457 0 268 122 82 20 chr2 71737507 71737605 -178950249 + (TA)n Simple_repeat Simple_repeat 1 104 0 33 0 0 0 chr2 71737613 71737646 -178950208 + AT_rich Low_complexity Low_complexity 1 33 0 2079 90 0 0 chr2 71737646 71737913 -178949941 + AluSc SINE Alu 34 300 -9 210 374 10 10 chr2 71737978 71738077 -178949777 - L2 LINE L2 -565 2749 2651 1978 232 47 52 chr2 71738744 71738957 -178948897 + MLT1E LTR MaLR 3 216 -377 2052 137 19 33 chr2 71738957 71739323 -178948531 - MLT1A1 LTR MaLR -4 361 1 1978 232 47 52 chr2 71739323 71739703 -178948151 + MLT1E LTR MaLR 216 593 0 194 357 32 24 chr2 71740772 71740898 -178946956 + MIR SINE MIR 21 147 -61 562 249 51 11 chr2 71742303 71742480 -178945374 - MIR SINE MIR 0 262 79 659 213 152 0 chr2 71742526 71742690 -178945164 - MER5A DNA MER1_type 0 189 1 243 0 0 0 chr2 71744792 71744819 -178943035 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2366 75 10 0 chr2 71744821 71745113 -178942741 - AluY SINE Alu -16 295 1 1065 176 37 23 chr2 71745277 71745493 -178942361 - MER20 DNA MER1_type 0 219 1 721 215 31 21 chr2 71747400 71747591 -178940263 + L1ME3A LINE L1 5976 6168 -2 635 187 193 7 chr2 71748339 71748489 -178939365 - MER5B DNA MER1_type 0 178 1 470 262 48 37 chr2 71748811 71748998 -178938856 + MIR SINE MIR 58 246 -16 221 374 59 27 chr2 71749108 71749330 -178938524 + L3b LINE CR1 1269 1497 -86 265 100 0 0 chr2 71749769 71749809 -178938045 + L2 LINE L2 3268 3307 -6 503 278 0 15 chr2 71751342 71751475 -178936379 - L2 LINE L2 0 3313 3183 1604 213 98 55 chr2 71751478 71751948 -178935906 - MLT1F1 LTR MaLR -7 560 71 890 330 49 9 chr2 71752001 71752596 -178935258 - L2 LINE L2 -124 3189 2563 261 210 185 76 chr2 71754574 71754731 -178933123 + MER5B DNA MER1_type 4 187 -2 1065 261 159 46 chr2 71756359 71756857 -178930997 + MLT1G1 LTR MaLR 2 555 0 22 0 0 0 chr2 71756925 71756947 -178930907 + AT_rich Low_complexity Low_complexity 1 22 0 415 303 45 8 chr2 71757031 71757163 -178930691 + L2 LINE L2 3150 3286 -27 223 93 47 0 chr2 71759964 71760007 -178927847 + (TAA)n Simple_repeat Simple_repeat 2 46 0 2285 114 0 0 chr2 71760070 71760377 -178927477 + AluY SINE Alu 1 307 -4 182 118 98 118 chr2 71760509 71760560 -178927294 - L3 LINE CR1 -878 699 650 1534 227 17 19 chr2 71761730 71762091 -178925763 - MLT1A1 LTR MaLR -2 363 4 2208 93 4 0 chr2 71762461 71762800 -178925054 + AluSg1 SINE Alu 1 340 0 2919 178 86 9 chr2 71763066 71763503 -178924351 + L1MD2 LINE L1 5681 6182 -177 189 0 0 0 chr2 71763503 71763524 -178924330 + (CA)n Simple_repeat Simple_repeat 2 22 0 2919 178 86 9 chr2 71763524 71763717 -178924137 + L1MD2 LINE L1 6182 6359 0 354 320 48 14 chr2 71764083 71764230 -178923624 - MER5A DNA MER1_type -1 188 37 23 0 0 0 chr2 71765180 71765203 -178922651 + AT_rich Low_complexity Low_complexity 1 23 0 215 95 32 48 chr2 71766045 71766108 -178921746 + (TATG)n Simple_repeat Simple_repeat 2 63 0 827 263 36 24 chr2 71766426 71766673 -178921181 - L2 LINE L2 -9 3304 3055 11625 187 39 18 chr2 71766674 71767494 -178920360 + L1PA15-16 LINE L1 1009 1810 -5039 2288 111 7 0 chr2 71767494 71767801 -178920053 + AluSx SINE Alu 1 309 -3 11625 187 39 18 chr2 71767801 71768823 -178919031 + L1PA15-16 LINE L1 1810 2809 -4040 1784 160 33 16 chr2 71768823 71769130 -178918724 + AluJb SINE Alu 1 312 0 11625 187 39 18 chr2 71769130 71770148 -178917706 + L1PA15-16 LINE L1 2809 3804 -3045 300 27 0 0 chr2 71770148 71770185 -178917669 + (CA)n Simple_repeat Simple_repeat 2 38 0 11625 187 39 18 chr2 71770185 71771170 -178916684 + L1PA15-16 LINE L1 3804 4968 -1881 1496 273 188 33 chr2 71771180 71771914 -178915940 - L2 LINE L2 -338 2976 2129 2896 277 73 11 chr2 71771933 71774069 -178913785 - L1MCa LINE L1 -883 5246 2842 37762 89 10 5 chr2 71774072 71780182 -178907672 + L1PA6 LINE L1 11 6154 0 2828 227 28 4 chr2 71780191 71781136 -178906718 - L1MCa LINE L1 -3267 2862 1896 1194 257 40 38 chr2 71781115 71781649 -178906205 - L1MCa LINE L1 -1963 4166 3621 * 752 274 129 23 chr2 71781823 71782149 -178905705 - L1MCa LINE L1 -2846 3283 2993 350 192 26 0 chr2 71782149 71782227 -178905627 - MER116 DNA Mariner 0 80 1 752 274 129 23 chr2 71782227 71782565 -178905289 - L1MCa LINE L1 -3136 2993 2548 1361 170 5 0 chr2 71782620 71782843 -178905011 - AluJb SINE Alu -88 224 1 31 58 0 0 chr2 71783048 71783100 -178904754 + AT_rich Low_complexity Low_complexity 1 52 0 373 293 83 44 chr2 71783100 71783329 -178904525 - L1MCa LINE L1 -3799 2330 2093 379 291 51 46 chr2 71783833 71784029 -178903825 - HAL1 LINE L1 -941 1566 1370 230 222 56 22 chr2 71784029 71784119 -178903735 - L1MCa LINE L1 -4866 1253 1161 879 279 93 26 chr2 71784141 71784528 -178903326 - MLT1J1 LTR MaLR -28 418 6 336 266 74 83 chr2 71784535 71784994 -178902860 - L1MCa LINE L1 -4970 1149 695 300 309 12 0 chr2 71785002 71785083 -178902771 - L1MCa LINE L1 -5494 625 544 2848 150 47 4 chr2 71785413 71785879 -178901975 - MER66B LTR ERV1 0 486 1 357 358 66 59 chr2 71786132 71786403 -178901451 + L2 LINE L2 3000 3272 0 251 294 56 48 chr2 71787400 71787526 -178900328 + MIR SINE MIR 20 146 -62 476 111 12 0 chr2 71787757 71787838 -178900016 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 24 32 0 0 chr2 71788062 71788093 -178899761 + AT_rich Low_complexity Low_complexity 1 31 0 1022 300 74 12 chr2 71788465 71788870 -178898984 + L2 LINE L2 2774 3202 -111 490 347 46 16 chr2 71789446 71789858 -178897996 - MLT1L LTR MaLR -36 563 122 1349 205 73 66 chr2 71790512 71791087 -178896767 - L1MC5 LINE L1 -74 7887 7309 257 316 243 0 chr2 71791758 71791894 -178895960 - MIR3 SINE MIR -38 170 2 251 308 42 50 chr2 71792788 71792908 -178894946 - L2 LINE L2 -16 3297 3179 1925 197 6 6 chr2 71793165 71793520 -178894334 - MLT1A1 LTR MaLR 0 365 11 261 98 0 0 chr2 71794170 71794211 -178893643 + (CA)n Simple_repeat Simple_repeat 1 41 0 216 0 0 0 chr2 71794932 71794956 -178892898 + (A)n Simple_repeat Simple_repeat 1 24 0 282 132 0 0 chr2 71795000 71795053 -178892801 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 654 324 40 5 chr2 71796563 71796785 -178891069 - MIR SINE MIR 0 262 33 185 135 108 0 chr2 71796818 71796855 -178890999 + MIR SINE MIR 222 262 0 31 0 0 0 chr2 71796855 71796886 -178890968 + AT_rich Low_complexity Low_complexity 1 31 0 1355 157 4 17 chr2 71796895 71797130 -178890724 + MER46A DNA MER2_type 1 232 -4 1871 198 14 38 chr2 71797291 71797715 -178890139 + MLT2D LTR ERVL 1 414 0 216 237 316 26 chr2 71799450 71799564 -178888290 + L2 LINE L2 3164 3310 -3 21 0 0 0 chr2 71799567 71799588 -178888266 + AT_rich Low_complexity Low_complexity 1 21 0 263 268 21 31 chr2 71800040 71800137 -178887717 + MIR3 SINE MIR 111 206 -2 1816 137 0 4 chr2 71800240 71800511 -178887343 - AluSg SINE Alu -17 293 24 719 227 208 5 chr2 71800627 71800834 -178887020 - MIR SINE MIR -9 253 5 528 273 61 25 chr2 71801327 71801525 -178886329 + MIR SINE MIR 48 252 -10 1064 254 53 80 chr2 71803639 71804076 -178883778 - L2 LINE L2 0 3313 2889 259 211 61 35 chr2 71804077 71804191 -178883663 + L1MA8 LINE L1 6175 6291 0 1030 303 85 20 chr2 71804207 71804656 -178883198 - L2 LINE L2 -481 2833 2356 739 310 123 49 chr2 71804667 71805205 -178882649 + L3 LINE CR1 941 1575 -2 23 0 0 0 chr2 71805358 71805381 -178882473 + AT_rich Low_complexity Low_complexity 1 23 0 213 265 133 12 chr2 71805637 71805720 -178882134 + MIR SINE MIR 170 262 0 241 170 132 0 chr2 71805872 71805925 -178881929 + MIR3 SINE MIR 130 189 -19 535 316 68 40 chr2 71805956 71806427 -178881427 + L1ME4a LINE L1 4233 4716 -1430 222 149 0 21 chr2 71806682 71806729 -178881125 + (TAAAA)n Simple_repeat Simple_repeat 1 46 0 248 239 15 0 chr2 71806785 71806852 -178881002 - LTR16B LTR ERVL 0 464 397 1772 179 91 30 chr2 71806854 71807284 -178880570 - MLT1C LTR MaLR -10 457 2 459 357 24 0 chr2 71807367 71807580 -178880274 - LTR16B LTR ERVL -194 270 53 608 255 60 41 chr2 71807809 71808154 -178879700 + L1ME4a LINE L1 5497 5857 -264 21 36 0 0 chr2 71808154 71808182 -178879672 + AT_rich Low_complexity Low_complexity 1 28 0 2535 71 0 0 chr2 71808182 71808493 -178879361 - AluY SINE Alu 0 311 1 8219 107 12 3 chr2 71808493 71810487 -178877367 - L1PA8A LINE L1 -8 6123 4111 326 381 14 27 chr2 71814379 71814526 -178873328 + MIR SINE MIR 3 147 -115 264 247 49 12 chr2 71814700 71814781 -178873073 - MLT1J2 LTR MaLR -205 245 162 1128 165 140 68 chr2 71815229 71815508 -178872346 + AluSx SINE Alu 1 299 -3 328 236 51 61 chr2 71816574 71816732 -178871122 + LTR50 LTR ERVL 1 130 -393 398 321 0 19 chr2 71817177 71817283 -178870571 + MIR SINE MIR 32 135 -73 736 314 4 25 chr2 71817306 71817548 -178870306 - MIR SINE MIR -8 254 18 281 283 88 0 chr2 71817557 71817670 -178870184 + MIR SINE MIR 139 261 -1 244 279 124 23 chr2 71818708 71818837 -178869017 - L2 LINE L2 -3 3310 3169 256 342 33 20 chr2 71818971 71819123 -178868731 - L2 LINE L2 -435 2879 2726 390 371 18 18 chr2 71820594 71820764 -178867090 - MIR3 SINE MIR -9 199 30 2302 32 0 0 chr2 71821131 71821415 -178866439 - L1PA4 LINE L1 -96 6059 5776 526 108 43 11 chr2 71821415 71821490 -178866364 + L1PA5 LINE L1 6058 6147 -7 270 73 0 0 chr2 71821490 71821531 -178866323 + (CATA)n Simple_repeat Simple_repeat 2 42 0 307 364 77 18 chr2 71821674 71821894 -178865960 - L3 LINE CR1 -1 1576 1344 191 339 34 0 chr2 71822352 71822411 -178865443 - L2 LINE L2 -74 3198 3138 231 331 35 72 chr2 71822719 71823009 -178864845 + L2 LINE L2 2827 3105 -167 329 207 9 0 chr2 71823098 71823214 -178864640 + GA-rich Low_complexity Low_complexity 1 117 0 1209 185 74 22 chr2 71824167 71824467 -178863387 - MER58B DNA MER1_type 0 341 2 598 269 55 6 chr2 71824672 71824854 -178863000 - MIR SINE MIR -52 210 20 206 298 9 61 chr2 71825037 71825151 -178862703 + L2 LINE L2 2952 3059 -213 325 238 143 16 chr2 71826338 71826464 -178861390 + MIR SINE MIR 79 220 -42 304 246 94 37 chr2 71827739 71827930 -178859924 + L1ME4a LINE L1 5892 6093 -28 746 192 60 12 chr2 71828739 71828906 -178858948 - MER58B DNA MER1_type 0 341 167 21 36 0 0 chr2 71828906 71828934 -178858920 + AT_rich Low_complexity Low_complexity 1 28 0 225 277 62 54 chr2 71829431 71829561 -178858293 - L2 LINE L2 -2 3270 3140 431 271 6 54 chr2 71831425 71831591 -178856263 - MER52A LTR ERV1 0 1755 1598 650 274 18 69 chr2 71831594 71831871 -178855983 - MER52A LTR ERV1 -285 1470 1208 819 197 192 109 chr2 71831891 71832474 -178855380 - MER52A LTR ERV1 -147 971 283 21 57 0 0 chr2 71832760 71832795 -178855059 + AT_rich Low_complexity Low_complexity 1 35 0 225 101 70 23 chr2 71832797 71832926 -178854928 + (TA)n Simple_repeat Simple_repeat 2 136 0 371 254 82 37 chr2 71832983 71833117 -178854737 - MIR3 SINE MIR -49 159 20 291 297 71 26 chr2 71833420 71833575 -178854279 - MER103 DNA DNA -4 162 1 209 331 73 53 chr2 71833828 71833979 -178853875 + MIR SINE MIR 49 202 -60 1457 210 62 19 chr2 71837191 71837562 -178850292 + L1ME3 LINE L1 5428 5814 -348 756 231 78 19 chr2 71837566 71837822 -178850032 + L1ME3 LINE L1 5886 6156 -6 192 40 0 0 chr2 71837829 71837854 -178850000 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1132 294 37 49 chr2 71837894 71838515 -178849339 + L2 LINE L2 2684 3305 -8 18430 53 0 12 chr2 71839200 71841642 -178846212 + L1P LINE L1 3 2415 -3731 207 0 0 0 chr2 71841857 71841880 -178845974 + (A)n Simple_repeat Simple_repeat 1 23 0 963 311 60 32 chr2 71843464 71844266 -178843588 + L2 LINE L2 2463 3295 -18 4400 254 50 18 chr2 71844321 71846160 -178841694 - L1MEc LINE L1 -4425 1971 37 4460 105 8 0 chr2 71846464 71847066 -178840788 - L1PA13 LINE L1 -1 6162 5556 366 299 56 65 chr2 71847455 71847669 -178840185 + L2 LINE L2 2920 3131 -182 1840 183 27 20 chr2 71847702 71848106 -178839748 - L1MB2 LINE L1 -16 6155 5749 634 311 60 6 chr2 71848244 71848499 -178839355 - MIR SINE MIR -1 261 3 188 268 52 72 chr2 71848974 71849071 -178838783 + MIR3 SINE MIR 114 208 0 671 264 20 10 chr2 71849222 71849419 -178838435 + MIR SINE MIR 56 254 -8 1600 178 0 4 chr2 71849862 71850120 -178837734 - L1P3 LINE L1 -6195 266 10 579 120 0 65 chr2 71850129 71850221 -178837633 + AluJo SINE Alu 47 132 -180 207 0 0 0 chr2 71851062 71851085 -178836769 + (A)n Simple_repeat Simple_repeat 1 23 0 406 299 37 70 chr2 71851856 71852070 -178835784 + L2 LINE L2 3066 3272 0 183 146 0 0 chr2 71852070 71852111 -178835743 + (TGGA)n Simple_repeat Simple_repeat 2 42 0 203 167 0 0 chr2 71852135 71852171 -178835683 + A-rich Low_complexity Low_complexity 6 41 0 212 265 0 0 chr2 71852825 71852874 -178834980 + CT-rich Low_complexity Low_complexity 3 51 0 1612 96 4 26 chr2 71854704 71854933 -178832921 - L1PA16 LINE L1 0 6166 5943 2127 193 38 51 chr2 71855391 71855863 -178831991 - MLT1C LTR MaLR 0 467 2 919 180 70 0 chr2 71855880 71856052 -178831802 + AluJo SINE Alu 128 311 -1 402 115 0 0 chr2 71856914 71856975 -178830879 + (TG)n Simple_repeat Simple_repeat 2 62 0 284 268 98 88 chr2 71857994 71858199 -178829655 - MIR SINE MIR -48 214 8 24 32 0 0 chr2 71859447 71859478 -178828376 + AT_rich Low_complexity Low_complexity 1 31 0 738 306 51 50 chr2 71860020 71860566 -178827288 + L1ME4a LINE L1 5574 6120 -1 703 200 15 0 chr2 71860695 71860830 -178827024 - AluJb SINE Alu -1 311 175 238 306 242 8 chr2 71860969 71861093 -178826761 + MIR3 SINE MIR 35 187 -21 431 282 36 0 chr2 71861962 71862072 -178825782 - MIR SINE MIR -115 147 34 1903 157 16 3 chr2 71862226 71862532 -178825322 - AluJo SINE Alu -2 310 1 230 284 0 45 chr2 71862855 71862922 -178824932 - MIR3 SINE MIR -7 201 138 234 370 20 0 chr2 71862959 71863059 -178824795 - MIR SINE MIR -62 146 45 * 327 338 40 0 chr2 71863055 71863206 -178824648 - MIR SINE MIR -24 238 82 30 0 0 0 chr2 71863589 71863619 -178824235 + AT_rich Low_complexity Low_complexity 1 30 0 2355 89 0 0 chr2 71864170 71864472 -178823382 + AluY SINE Alu 1 302 -9 219 362 36 29 chr2 71864730 71864868 -178822986 + L2 LINE L2 3133 3271 -1 969 216 125 16 chr2 71864887 71865283 -178822571 + L1MCa LINE L1 2105 2582 -3947 363 23 0 0 chr2 71865331 71865375 -178822479 + (CA)n Simple_repeat Simple_repeat 1 44 0 2199 118 0 0 chr2 71865403 71865692 -178822162 + AluSg SINE Alu 1 289 -21 740 194 114 96 chr2 71866474 71866798 -178821056 + Charlie8 DNA MER1_type 79 408 -2009 2028 120 27 0 chr2 71867066 71867358 -178820496 + MLT2A2 LTR ERVL 1 300 -153 273 75 0 0 chr2 71867972 71868012 -178819842 + (CA)n Simple_repeat Simple_repeat 1 40 0 326 301 144 74 chr2 71868025 71868351 -178819503 + L2 LINE L2 2919 3267 -5 272 190 35 17 chr2 71870288 71870346 -178817508 + ORSL DNA AcHobo 1 59 -216 258 231 0 0 chr2 71870346 71870411 -178817443 + (TA)n Simple_repeat Simple_repeat 1 65 0 1299 178 17 9 chr2 71870415 71870645 -178817209 + MER46A DNA MER2_type 5 236 0 249 138 138 0 chr2 71870651 71870716 -178817138 + ORSL DNA AcHobo 62 135 -140 2773 108 3 16 chr2 71870716 71871096 -178816758 + THE1C LTR MaLR 1 375 0 10821 121 40 11 chr2 71871096 71872632 -178815222 + THE1C-int LTR MaLR 1 1580 0 2105 133 64 17 chr2 71872635 71872980 -178814874 + THE1C LTR MaLR 15 375 0 796 216 0 25 chr2 71872980 71873126 -178814728 + ORSL DNA AcHobo 134 275 0 314 279 47 0 chr2 71873759 71873845 -178814009 - MIR SINE MIR -111 151 62 254 296 40 44 chr2 71876978 71877140 -178810714 + MER5A DNA MER1_type 29 178 0 209 347 14 0 chr2 71880059 71880131 -178807723 - L2 LINE L2 -4 3268 3196 * 539 293 55 102 chr2 71880122 71880991 -178806863 + L2 LINE L2 2285 3106 -207 933 265 14 0 chr2 71881034 71881249 -178806605 + MIR SINE MIR 4 221 -41 384 343 0 0 chr2 71881312 71881414 -178806440 + L2 LINE L2 3171 3272 0 538 204 241 7 chr2 71881482 71881619 -178806235 - MER5A DNA MER1_type -10 179 11 219 36 0 0 chr2 71882957 71882985 -178804869 + (A)n Simple_repeat Simple_repeat 1 28 0 1484 109 18 27 chr2 71884322 71884542 -178803312 + MER20 DNA MER1_type 2 219 0 504 222 94 0 chr2 71884800 71884917 -178802937 + MER94 DNA DNA 5 132 -2 970 155 27 21 chr2 71885767 71885954 -178801900 - MER53 DNA DNA -1 188 1 2629 58 0 3 chr2 71886604 71886916 -178800938 - AluY SINE Alu 0 311 1 23 0 0 0 chr2 71886977 71887000 -178800854 + AT_rich Low_complexity Low_complexity 1 23 0 225 65 0 0 chr2 71887656 71887687 -178800167 + (TC)n Simple_repeat Simple_repeat 1 31 0 235 379 35 9 chr2 71888527 71888643 -178799211 + MIR3 SINE MIR 69 187 -21 572 248 157 0 chr2 71889592 71889745 -178798109 - MER5A DNA MER1_type 0 189 13 849 174 54 0 chr2 71890409 71890558 -178797296 - L1PA3 LINE L1 -5 6150 5994 237 300 17 0 chr2 71890564 71890624 -178797230 - L2 LINE L2 -14 3299 3239 2032 276 106 31 chr2 71891688 71891850 -178796004 + L2 LINE L2 626 774 -2540 558 276 11 54 chr2 71891850 71891905 -178795949 + MER5B DNA MER1_type 2 58 -120 222 37 0 0 chr2 71891905 71891932 -178795922 + (TTG)n Simple_repeat Simple_repeat 2 28 0 558 276 11 54 chr2 71891932 71892061 -178795793 + MER5B DNA MER1_type 58 178 0 2032 276 106 31 chr2 71892061 71892379 -178795475 + L2 LINE L2 774 1067 -2247 1404 285 67 6 chr2 71892379 71892870 -178794984 - LTR33 LTR ERVL 0 521 1 2032 276 106 31 chr2 71892870 71893321 -178794533 + L2 LINE L2 1067 1628 -1686 605 299 100 42 chr2 71893403 71893734 -178794120 + L2 LINE L2 2941 3290 -23 431 231 39 0 chr2 71893917 71894021 -178793833 + MIR SINE MIR 39 146 -116 1090 251 69 46 chr2 71894874 71895265 -178792589 + MLT1J LTR MaLR 111 510 -1 306 0 0 0 chr2 71895893 71895927 -178791927 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 1703 183 0 31 chr2 71895929 71896219 -178791635 - AluJo SINE Alu -30 282 2 324 356 2 0 chr2 71897521 71897638 -178790216 - MIR SINE MIR -89 119 1 2219 145 8 35 chr2 71898017 71898418 -178789436 - MLT1B LTR MaLR 0 390 1 2996 101 5 16 chr2 71898854 71899301 -178788553 + L1PB2 LINE L1 5708 6149 -2 241 218 57 32 chr2 71899375 71899482 -178788372 + L1M LINE L1 5324 5427 -744 213 349 68 15 chr2 71900540 71900672 -178787182 - L2 LINE L2 -323 2990 2852 305 222 15 0 chr2 71900747 71900819 -178787035 + FRAM/FAM SINE Alu 1 65 -110 33197 68 9 8 chr2 71900819 71906326 -178781528 - L1PA6 LINE L1 -4 6150 645 2776 161 22 41 chr2 71907630 71908212 -178779642 - L1MD3 LINE L1 -21 7974 7404 306 245 11 43 chr2 71908212 71908306 -178779548 - MLT1F1 LTR MaLR -442 125 35 239 242 0 0 chr2 71908314 71908380 -178779474 - L1MD3 LINE L1 -887 7108 7043 21 0 0 0 chr2 71908769 71908790 -178779064 + AT_rich Low_complexity Low_complexity 1 21 0 2023 102 16 33 chr2 71909591 71909896 -178777958 + AluSq SINE Alu 1 300 -13 319 331 54 15 chr2 71910051 71910181 -178777673 + L2 LINE L2 3168 3302 -11 21 36 0 0 chr2 71910835 71910863 -178776991 + AT_rich Low_complexity Low_complexity 1 28 0 2360 81 7 0 chr2 71911182 71911479 -178776375 - AluY SINE Alu -12 299 1 27 0 0 0 chr2 71912298 71912325 -178775529 + AT_rich Low_complexity Low_complexity 1 27 0 277 299 43 33 chr2 71912875 71913043 -178774811 - MIR SINE MIR -50 212 41 184 295 98 27 chr2 71914285 71914397 -178773457 - MIR3 SINE MIR -54 154 35 21 0 0 0 chr2 71915438 71915459 -178772395 + AT_rich Low_complexity Low_complexity 1 21 0 545 103 36 45 chr2 71917216 71917897 -178769957 + (CA)n Simple_repeat Simple_repeat 1 674 0 673 91 23 40 chr2 71917972 71918148 -178769706 + (CA)n Simple_repeat Simple_repeat 1 173 0 466 138 16 58 chr2 71918209 71918397 -178769457 + (CA)n Simple_repeat Simple_repeat 1 180 0 362 219 29 9 chr2 71919349 71919454 -178768400 + MER102a DNA MER1_type 214 320 -10 851 188 7 0 chr2 71920475 71920629 -178767225 - MER45A DNA AcHobo -2 176 22 699 301 62 9 chr2 71921748 71921974 -178765880 + MIR SINE MIR 15 252 -10 2151 108 0 0 chr2 71923115 71923413 -178764441 - AluSc SINE Alu 0 298 1 1330 160 42 19 chr2 71924097 71924409 -178763445 - MER33 DNA MER1_type 0 324 6 553 198 0 29 chr2 71924649 71924821 -178763033 + CT-rich Low_complexity Low_complexity 2 168 0 374 235 0 8 chr2 71924851 71924970 -178762884 + CT-rich Low_complexity Low_complexity 1 118 0 1089 252 18 46 chr2 71924970 71925470 -178762384 - L1MCa LINE L1 -5129 1297 812 314 232 34 62 chr2 71925611 71925788 -178762066 + L1ME3A LINE L1 3821 3992 -2154 22 35 0 0 chr2 71925789 71925818 -178762036 + AT_rich Low_complexity Low_complexity 1 29 0 10022 206 66 11 chr2 71925843 71930237 -178757617 + L1P5 LINE L1 6 6507 -360 313 302 0 28 chr2 71930254 71930360 -178757494 + L1MC4 LINE L1 6601 6703 -1339 * 314 283 54 0 chr2 71930318 71930410 -178757444 - L1MC4 LINE L1 -1339 6703 6607 * 321 219 0 62 chr2 71930390 71930486 -178757368 + L1MC4 LINE L1 6614 6703 -1339 210 219 41 0 chr2 71930486 71930513 -178757341 + (TA)n Simple_repeat Simple_repeat 2 26 -51 2232 140 5 8 chr2 71930513 71930884 -178756970 + L1PB1 LINE L1 5782 6151 0 210 219 41 0 chr2 71930884 71930929 -178756925 + (TA)n Simple_repeat Simple_repeat 26 77 0 272 259 138 93 chr2 71930936 71932156 -178755698 + L1ME3A LINE L1 4032 5306 -840 189 150 17 33 chr2 71932158 71932218 -178755636 + GA-rich Low_complexity Low_complexity 2 60 0 1954 141 0 26 chr2 71932254 71932558 -178755296 + AluSg SINE Alu 1 296 -14 1113 290 77 4 chr2 71932578 71933127 -178754727 + L1ME3A LINE L1 5353 5941 -229 3306 262 73 34 chr2 71934008 71935761 -178752093 + L1ME1 LINE L1 92 1913 -4483 * 4233 214 78 14 chr2 71935759 71937758 -178750096 + L1ME1 LINE L1 4109 6223 -12 286 340 107 0 chr2 71939673 71939776 -178748078 + L2 LINE L2 3200 3313 0 206 57 0 29 chr2 71940014 71940020 -178747834 + (GGAA)n Simple_repeat Simple_repeat 3 8 -28 2201 105 16 0 chr2 71940020 71940325 -178747529 + AluSp SINE Alu 1 310 -3 206 57 0 29 chr2 71940325 71940353 -178747501 + (GGAA)n Simple_repeat Simple_repeat 8 36 0 189 0 0 0 chr2 71942176 71942197 -178745657 + (TG)n Simple_repeat Simple_repeat 2 22 0 195 218 0 0 chr2 71942655 71942710 -178745144 + G-rich Low_complexity Low_complexity 2 56 0 204 288 90 27 chr2 71943746 71943857 -178743997 - MIR3 SINE MIR -32 176 59 432 0 0 0 chr2 71944379 71944427 -178743427 + (TG)n Simple_repeat Simple_repeat 1 48 0 215 152 45 15 chr2 71944924 71944990 -178742864 + GA-rich Low_complexity Low_complexity 1 68 0 499 298 88 45 chr2 71945407 71945536 -178742318 + L2 LINE L2 2568 2690 -624 15080 30 2 1 chr2 71945536 71947981 -178739873 + L1PA3 LINE L1 3696 6148 -7 189 0 0 0 chr2 71947981 71948002 -178739852 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 499 298 88 45 chr2 71948011 71948234 -178739620 + L2 LINE L2 2690 2935 -379 339 303 130 12 chr2 71948408 71948570 -178739284 + L2 LINE L2 3133 3313 0 211 194 0 0 chr2 71949277 71949313 -178738541 + GA-rich Low_complexity Low_complexity 1 36 0 576 302 34 86 chr2 71949647 71950173 -178737681 + MLT1J LTR MaLR 13 511 0 1102 220 94 90 chr2 71953321 71953766 -178734088 + MLT1D LTR MaLR 21 481 0 243 210 129 0 chr2 71953840 71953902 -178733952 - L2 LINE L2 -4 3309 3240 753 308 64 29 chr2 71955260 71955712 -178732142 + MLT1K LTR MaLR 118 585 -3 849 263 99 56 chr2 71956316 71956853 -178731001 + L1ME4a LINE L1 5562 6121 0 390 314 167 16 chr2 71958049 71958294 -178729560 - L2 LINE L2 -6 3266 2985 191 323 57 57 chr2 71958305 71958497 -178729357 - MIR SINE MIR -51 211 20 2501 47 0 10 chr2 71959522 71959821 -178728033 + AluY SINE Alu 1 296 -15 872 131 15 8 chr2 71959890 71960020 -178727834 + FLAM_C SINE Alu 1 131 -2 3134 101 9 14 chr2 71962423 71962689 -178725165 - L1PA15 LINE L1 -2 6163 5898 1594 59 15 0 chr2 71962689 71962892 -178724962 - AluY SINE Alu -1 310 105 3134 101 9 14 chr2 71962892 71963071 -178724783 - L1PA15 LINE L1 -267 5898 5720 233 330 30 10 chr2 71963092 71963192 -178724662 + MIR SINE MIR 45 146 -62 581 300 55 24 chr2 71964613 71964866 -178722988 - L2 LINE L2 -5 3308 3048 669 290 107 48 chr2 71964988 71965132 -178722722 - L2 LINE L2 -561 2753 2619 2021 169 39 30 chr2 71965132 71965282 -178722572 + MLT1A1 LTR MaLR 1 148 -217 2178 100 0 0 chr2 71965282 71965588 -178722266 + AluSg1 SINE Alu 1 306 0 2021 169 39 30 chr2 71965588 71965798 -178722056 + MLT1A1 LTR MaLR 148 365 0 669 290 107 48 chr2 71965798 71965943 -178721911 - L2 LINE L2 -695 2619 2447 2181 134 0 0 chr2 71966017 71966323 -178721531 - AluSx SINE Alu -5 307 2 359 262 24 0 chr2 71966334 71966418 -178721436 + MER5A DNA MER1_type 8 93 -96 207 88 29 0 chr2 71966475 71966509 -178721345 + (GGA)n Simple_repeat Simple_repeat 2 36 0 181 365 16 0 chr2 71966524 71966587 -178721267 - MIR SINE MIR -151 111 48 217 238 0 0 chr2 71966813 71966855 -178720999 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr2 71969582 71969603 -178718251 + AT_rich Low_complexity Low_complexity 1 21 0 593 322 48 0 chr2 71972376 71972603 -178715251 - MIR SINE MIR -3 259 22 189 250 150 0 chr2 71973149 71973209 -178714645 - MIR3 SINE MIR -54 154 86 306 287 124 23 chr2 71974377 71974506 -178713348 - MIR SINE MIR -101 161 20 228 173 62 86 chr2 71975022 71975103 -178712751 + Charlie7 DNA MER1_type 2182 2260 -352 629 280 68 68 chr2 71975438 71975820 -178712034 - MLT1J2 LTR MaLR -2 448 67 2550 126 22 0 chr2 71975832 71976188 -178711666 + THE1B LTR MaLR 1 364 0 204 245 0 0 chr2 71976349 71976398 -178711456 - L2 LINE L2 -3 3310 3262 263 303 202 0 chr2 71977227 71977316 -178710538 - L2 LINE L2 -12 3260 3154 241 307 63 39 chr2 71977600 71977727 -178710127 + MER5A DNA MER1_type 1 130 -59 273 321 71 9 chr2 71977803 71977915 -178709939 - MER5B DNA MER1_type 0 178 60 523 295 66 63 chr2 71979073 71979483 -178708371 + HAL1 LINE L1 583 993 -1514 1167 260 72 18 chr2 71979499 71980011 -178707843 + HAL1 LINE L1 1029 1568 -939 645 179 82 125 chr2 71980204 71980484 -178707370 + LTR41 LTR ERVL 506 773 0 1013 240 92 117 chr2 71980494 71980750 -178707104 + HAL1 LINE L1 1665 1926 -581 2301 87 0 0 chr2 71980750 71981038 -178706816 + AluSg1 SINE Alu 1 288 -21 1013 240 92 117 chr2 71981038 71981631 -178706223 + HAL1 LINE L1 1926 2493 -14 49 18 0 0 chr2 71981740 71981796 -178706058 + AT_rich Low_complexity Low_complexity 1 56 0 253 299 0 0 chr2 71981833 71981900 -178705954 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 406 90 13 26 chr2 71982310 71982388 -178705466 + (TAGA)n Simple_repeat Simple_repeat 3 79 0 318 323 175 0 chr2 71982846 71983069 -178704785 + MIR SINE MIR 1 262 0 284 302 108 3 chr2 71983159 71983286 -178704568 - MIR SINE MIR -58 150 18 411 271 75 108 chr2 71983405 71983619 -178704235 + MIR3 SINE MIR 1 207 -1 501 290 54 17 chr2 71983856 71984036 -178703818 - MIR3 SINE MIR -17 191 3 188 291 18 0 chr2 71984627 71984682 -178703172 - L2 LINE L2 -1 3271 3216 180 125 0 0 chr2 71984946 71984978 -178702876 + (TA)n Simple_repeat Simple_repeat 1 32 0 30 0 0 0 chr2 71984985 71985015 -178702839 + AT_rich Low_complexity Low_complexity 1 30 0 371 218 36 18 chr2 71985047 71985157 -178702697 - L1MC5 LINE L1 -44 7917 7806 198 0 0 0 chr2 71985173 71985195 -178702659 + (A)n Simple_repeat Simple_repeat 1 22 0 351 217 85 78 chr2 71985224 71985353 -178702501 - MER94 DNA DNA 0 134 5 230 307 0 13 chr2 71985756 71985831 -178702023 + LTR33A LTR ERVL 444 517 -6 224 320 0 27 chr2 71986292 71986367 -178701487 + L2 LINE L2 3241 3313 0 1063 162 52 57 chr2 71986471 71986681 -178701173 - MER3 DNA MER1_type 0 209 1 497 303 90 17 chr2 71986861 71986957 -178700897 - MIR SINE MIR 0 262 174 1293 191 70 49 chr2 71986957 71987286 -178700568 + MER46C DNA MER2_type 3 338 0 497 303 90 17 chr2 71987286 71987423 -178700431 - MIR SINE MIR -88 174 12 314 287 92 0 chr2 71989511 71989598 -178698256 + MIR SINE MIR 3 97 -165 224 157 20 20 chr2 71989598 71989649 -178698205 + MIR SINE MIR 212 262 0 562 201 85 6 chr2 71989818 71989982 -178697872 + MER104 DNA MER2_type 3 179 -1 2795 196 17 6 chr2 71990433 71990952 -178696902 + L1M1 LINE L1 1069 1593 -5972 * 3340 192 20 46 chr2 71990950 71991224 -178696630 + L1M1 LINE L1 3942 4222 -3343 2254 58 0 41 chr2 71991224 71991515 -178696339 + AluY SINE Alu 28 306 -5 3340 192 20 46 chr2 71991515 71991927 -178695927 + L1M1 LINE L1 4222 4607 -2958 2232 112 0 3 chr2 71991927 71992223 -178695631 + AluSx SINE Alu 3 297 -15 3340 192 20 46 chr2 71992223 71992333 -178695521 + L1M1 LINE L1 4607 4718 -2847 1368 163 0 0 chr2 71992333 71992542 -178695312 - Ricksha_c DNA DNA -717 1329 1121 2174 112 3 0 chr2 71992596 71992883 -178694971 + AluSx SINE Alu 2 289 -23 1836 141 29 10 chr2 71993179 71993485 -178694369 + AluJo SINE Alu 1 312 0 224 233 0 0 chr2 71993499 71993542 -178694312 + MIR SINE MIR 58 100 -162 244 259 0 0 chr2 71995096 71995154 -178692700 - MER5A DNA MER1_type -84 105 48 320 249 164 28 chr2 71996189 71996402 -178691452 + MIR SINE MIR 21 262 0 238 254 32 0 chr2 71996732 71996795 -178691059 + MLT1L LTR MaLR 1 65 -550 572 281 42 103 chr2 71996840 71997199 -178690655 + MLT1J LTR MaLR 156 492 -19 26 0 0 0 chr2 71997380 71997406 -178690448 + AT_rich Low_complexity Low_complexity 1 26 0 295 202 0 131 chr2 71997998 71998181 -178689673 - AluJb SINE Alu -6 296 138 32 43 0 0 chr2 71998377 71998423 -178689431 + AT_rich Low_complexity Low_complexity 1 46 0 330 87 0 0 chr2 71999108 71999154 -178688700 + (CAGA)n Simple_repeat Simple_repeat 2 47 0 2277 88 34 0 chr2 71999488 71999785 -178688069 + AluSp SINE Alu 1 307 -6 2202 105 0 0 chr2 72000172 72000448 -178687406 - AluSq SINE Alu -37 276 1 1153 258 66 62 chr2 72000448 72000627 -178687227 - L1ME4a LINE L1 -227 5894 5717 1916 161 0 13 chr2 72000627 72000937 -178686917 + AluJo SINE Alu 5 310 -2 1153 258 66 62 chr2 72000937 72001458 -178686396 - L1ME4a LINE L1 -404 5717 5180 357 257 69 4 chr2 72001770 72001945 -178685909 + MIR SINE MIR 7 260 -2 348 24 0 0 chr2 72004035 72004076 -178683778 + (A)n Simple_repeat Simple_repeat 1 41 0 413 85 0 17 chr2 72006461 72006520 -178681334 + MER53 DNA DNA 1 58 -131 * 539 83 475 0 chr2 72006484 72006604 -178681250 - MER53 DNA DNA -12 177 1 940 159 33 11 chr2 72007713 72007895 -178679959 + MER5A DNA MER1_type 4 189 0 324 120 0 0 chr2 72008117 72008167 -178679687 + (CA)n Simple_repeat Simple_repeat 1 50 0 451 124 0 34 chr2 72012008 72012097 -178675757 + L1PB3 LINE L1 6067 6152 -2 31 26 0 0 chr2 72012101 72012139 -178675715 + AT_rich Low_complexity Low_complexity 1 38 0 2405 108 8 45 chr2 72012235 72012613 -178675241 - THE1B LTR MaLR 0 364 1 251 216 20 0 chr2 72013386 72013437 -178674417 - L2 LINE L2 -10 3303 3252 764 179 75 0 chr2 72013447 72013581 -178674273 - MER46A DNA MER2_type -90 146 3 725 166 175 57 chr2 72013449 72013660 -178674194 + MER46A DNA MER2_type 1 236 0 * 338 214 119 82 chr2 72015126 72015234 -178672620 - MER5B DNA MER1_type -13 165 48 2096 135 6 3 chr2 72015234 72015546 -178672308 - AluSp SINE Alu 0 313 1 338 214 119 82 chr2 72015546 72015596 -178672258 - MER5B DNA MER1_type -130 48 1 233 0 62 0 chr2 72016165 72016197 -178671657 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1361 187 10 74 chr2 72016200 72016499 -178671355 - AluJo SINE Alu -30 282 3 800 148 22 15 chr2 72016500 72016635 -178671219 - AluJo SINE Alu -176 136 1 1948 99 8 4 chr2 72016674 72016926 -178670928 + AluSx SINE Alu 33 285 -27 387 0 0 0 chr2 72016926 72016969 -178670885 + (CA)n Simple_repeat Simple_repeat 2 44 0 232 143 36 0 chr2 72017262 72017318 -178670536 + (TGGA)n Simple_repeat Simple_repeat 3 60 0 234 273 15 0 chr2 72017486 72017552 -178670302 - MLT1K LTR MaLR 0 588 522 249 250 16 16 chr2 72017879 72017943 -178669911 - MLT1K LTR MaLR -345 243 180 448 193 0 0 chr2 72018718 72018801 -178669053 + MER5A DNA MER1_type 26 108 -81 1086 172 10 15 chr2 72019184 72019387 -178668467 + AluJb SINE Alu 85 286 -26 2203 99 41 0 chr2 72019524 72019818 -178668036 - AluSg SINE Alu 0 310 5 371 315 20 7 chr2 72019867 72020013 -178667841 - MIR3 SINE MIR -27 181 34 321 234 50 119 chr2 72021069 72021287 -178666567 + L1ME3A LINE L1 5968 6170 0 1855 129 59 78 chr2 72022263 72022635 -178665219 - MLT1A1 LTR MaLR 0 365 1 2074 136 3 0 chr2 72023231 72023525 -178664329 + AluSx SINE Alu 1 295 -17 597 194 89 0 chr2 72023535 72023715 -178664139 - Charlie1 DNA MER1_type -60 2701 2506 279 137 41 0 chr2 72023953 72024026 -178663828 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 231 114 0 0 chr2 72024030 72024065 -178663789 + (CATA)n Simple_repeat Simple_repeat 2 36 0 362 297 8 8 chr2 72024086 72024204 -178663650 - L1MC4a LINE L1 -1879 5929 5812 533 249 254 0 chr2 72024361 72024550 -178663304 - MIR SINE MIR -23 239 3 392 265 185 15 chr2 72024708 72024908 -178662946 - MIR SINE MIR -25 237 4 336 181 48 0 chr2 72026004 72026109 -178661745 + (TATATG)n Simple_repeat Simple_repeat 2 111 0 2022 133 0 0 chr2 72026184 72026469 -178661385 + AluSx SINE Alu 1 285 -27 264 77 0 0 chr2 72026469 72026508 -178661346 + (CA)n Simple_repeat Simple_repeat 2 40 0 222 191 0 0 chr2 72028687 72028729 -178659125 + GA-rich Low_complexity Low_complexity 2 43 0 552 56 0 0 chr2 72028731 72028803 -178659051 + (GGAA)n Simple_repeat Simple_repeat 4 75 0 361 250 14 20 chr2 72029023 72029171 -178658683 + CT-rich Low_complexity Low_complexity 1 147 0 581 212 18 6 chr2 72029484 72029654 -178658200 + CT-rich Low_complexity Low_complexity 1 172 0 400 302 42 33 chr2 72030319 72030534 -178657320 + L1ME4a LINE L1 5687 5903 -218 22 0 0 0 chr2 72032120 72032142 -178655712 + AT_rich Low_complexity Low_complexity 1 22 0 1205 163 131 17 chr2 72032209 72032506 -178655348 + MER33 DNA MER1_type 1 324 0 531 271 105 84 chr2 72034068 72034459 -178653395 - MLT1J LTR MaLR 0 511 113 198 330 20 20 chr2 72035755 72035855 -178651999 + MIR3 SINE MIR 103 202 -6 216 135 0 0 chr2 72036666 72036703 -178651151 + (ATG)n Simple_repeat Simple_repeat 1 37 0 443 256 105 50 chr2 72036708 72036927 -178650927 - MIR SINE MIR 0 262 32 505 290 13 13 chr2 72038032 72038187 -178649667 + MIR3 SINE MIR 3 157 -51 222 297 128 27 chr2 72038444 72038592 -178649262 + MIR SINE MIR 3 165 -97 543 242 63 63 chr2 72038602 72038792 -178649062 - MER63A DNA MER1_type -20 190 1 289 338 0 0 chr2 72038792 72038872 -178648982 + MIR SINE MIR 158 237 -25 185 321 0 48 chr2 72039052 72039136 -178648718 - L2 LINE L2 -6 3307 3228 2308 221 119 27 chr2 72040573 72041159 -178646695 + L1 LINE L1 3656 4187 -1959 2309 112 0 6 chr2 72041159 72041471 -178646383 - AluSg SINE Alu 0 310 1 2134 108 3 46 chr2 72041475 72041799 -178646055 - AluSq SINE Alu -3 310 1 2308 221 119 27 chr2 72041799 72041957 -178645897 + L1 LINE L1 4189 4474 -1672 8301 49 115 7 chr2 72042062 72043175 -178644679 - L1P LINE L1 -4528 1618 386 1569 130 74 39 chr2 72043596 72043880 -178643974 + LTR10A LTR ERV1 255 548 -61 215 40 0 0 chr2 72044022 72044047 -178643807 + (T)n Simple_repeat Simple_repeat 1 25 0 3165 137 28 38 chr2 72044171 72044705 -178643149 + LTR26B LTR ERV1 1 529 -2 1973 135 3 14 chr2 72045244 72045541 -178642313 + AluSx SINE Alu 1 294 -18 342 98 0 0 chr2 72047127 72047178 -178640676 + (TA)n Simple_repeat Simple_repeat 2 52 0 441 0 0 0 chr2 72047228 72047277 -178640577 + (TA)n Simple_repeat Simple_repeat 2 50 0 1038 251 140 33 chr2 72048538 72049002 -178638852 - MLT1G1 LTR MaLR -12 583 69 2836 152 2 2 chr2 72049015 72049463 -178638391 + L1PA15 LINE L1 5717 6164 -1 30 0 0 0 chr2 72049463 72049493 -178638361 + AT_rich Low_complexity Low_complexity 1 30 0 1300 142 81 45 chr2 72049494 72049740 -178638114 + AluSg SINE Alu 39 293 -17 1284 128 0 17 chr2 72049769 72049949 -178637905 + AluSx SINE Alu 1 177 -135 1579 106 0 10 chr2 72050049 72050257 -178637597 - AluSq SINE Alu -107 206 1 1848 148 3 3 chr2 72050547 72050831 -178637023 + AluJo SINE Alu 1 284 -28 1786 186 53 66 chr2 72051136 72051624 -178636230 - MER31A LTR ERV1 -3 482 1 867 282 103 18 chr2 72051663 72051993 -178635861 + MLT1K LTR MaLR 231 588 0 320 171 195 0 chr2 72052142 72052224 -178635630 + LTR10A LTR ERV1 1 98 -511 280 314 35 0 chr2 72052852 72052938 -178634916 - MER5C DNA MER1_type -219 105 17 448 246 90 8 chr2 72053121 72053255 -178634599 - MIR3 SINE MIR -37 171 27 2154 105 3 14 chr2 72053395 72053710 -178634144 + AluSg SINE Alu 1 312 0 646 314 139 0 chr2 72053941 72054250 -178633604 + L3 LINE CR1 1114 1465 -112 709 218 69 0 chr2 72054272 72054446 -178633408 - MER53 DNA DNA -3 186 1 319 319 39 95 chr2 72056180 72056518 -178631336 + L2 LINE L2 2941 3259 -13 2883 193 25 5 chr2 72056519 72057114 -178630740 + L1MB4 LINE L1 5574 6180 0 311 218 0 0 chr2 72057217 72057272 -178630582 + MIR SINE MIR 92 146 -62 877 198 6 0 chr2 72058720 72058887 -178628967 + MER58B DNA MER1_type 10 177 -164 842 155 187 0 chr2 72058987 72059142 -178628712 + MER58B DNA MER1_type 158 341 0 545 42 14 0 chr2 72059609 72059681 -178628173 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 254 375 48 12 chr2 72059953 72060121 -178627733 + L3 LINE CR1 1318 1491 -86 414 229 127 25 chr2 72060161 72060318 -178627536 + MER5A DNA MER1_type 13 185 -4 505 240 65 96 chr2 72061940 72062169 -178625685 - MER102a DNA MER1_type -2 328 107 2253 107 3 0 chr2 72063533 72063831 -178624023 + AluSx SINE Alu 1 299 -13 706 130 0 9 chr2 72064630 72064745 -178623109 - AluSp/q SINE Alu -14 299 186 1972 148 0 10 chr2 72064908 72065206 -178622648 + AluJo SINE Alu 1 295 -17 207 289 113 42 chr2 72065311 72065453 -178622401 + L2 LINE L2 3115 3266 -6 338 270 107 62 chr2 72066645 72066823 -178621031 + MIR3 SINE MIR 16 201 -7 394 272 92 42 chr2 72067277 72067632 -178620222 - LTR16A1 LTR ERVL 0 457 75 357 335 77 20 chr2 72068417 72068665 -178619189 + MLT1J2 LTR MaLR 65 326 -124 563 247 196 41 chr2 72069079 72069273 -178618581 + MER58A DNA MER1_type 1 224 0 284 196 147 49 chr2 72070454 72070556 -178617298 + MER5C DNA MER1_type 13 124 -200 189 0 0 0 chr2 72072061 72072082 -178615772 + (A)n Simple_repeat Simple_repeat 1 21 0 752 186 60 27 chr2 72072257 72072440 -178615414 + MER53 DNA DNA 1 189 0 207 209 164 30 chr2 72072486 72072553 -178615301 - MER5A DNA MER1_type -1 188 113 2074 127 32 176 chr2 72072888 72073422 -178614432 + LTR32 LTR ERVL 15 471 0 336 305 75 20 chr2 72073429 72073629 -178614225 - MIR SINE MIR -32 230 20 278 282 26 0 chr2 72073666 72073744 -178614110 + MIR SINE MIR 28 107 -101 366 270 135 0 chr2 72074245 72074371 -178613483 + MIR SINE MIR 120 262 0 241 346 103 0 chr2 72074389 72074496 -178613358 + L2 LINE L2 3141 3258 -14 285 169 0 0 chr2 72074504 72074563 -178613291 + (TGGA)n Simple_repeat Simple_repeat 3 61 0 716 192 17 0 chr2 72074852 72074972 -178612882 + FLAM_C SINE Alu 2 123 -20 353 121 0 30 chr2 72074975 72075041 -178612813 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 1410 175 4 0 chr2 72076455 72076684 -178611170 + AluJo SINE Alu 1 230 -82 478 310 51 29 chr2 72077911 72078076 -178609778 - L1ME3A LINE L1 -289 5881 5704 2228 123 0 0 chr2 72078076 72078369 -178609485 - AluSx SINE Alu -18 294 2 478 310 51 29 chr2 72078369 72078516 -178609338 - L1ME3A LINE L1 -466 5704 5562 577 278 76 5 chr2 72079171 72079394 -178608460 + MIR SINE MIR 18 256 -6 346 295 129 16 chr2 72080462 72080655 -178607199 + MIR SINE MIR 34 248 -14 285 156 14 26 chr2 72082544 72082617 -178605237 + MER5A DNA MER1_type 33 109 -80 813 241 54 51 chr2 72083249 72083587 -178604267 + MLT1I LTR MaLR 89 409 0 1643 157 82 34 chr2 72085099 72085392 -178602462 + AluSx SINE Alu 1 307 -5 210 143 0 0 chr2 72086476 72086511 -178601343 + (GGA)n Simple_repeat Simple_repeat 2 36 0 276 30 0 0 chr2 72087024 72087057 -178600797 + (CAG)n Simple_repeat Simple_repeat 3 35 0 1979 160 0 3 chr2 72087398 72087704 -178600150 - AluJo SINE Alu -7 305 1 790 182 126 6 chr2 72088148 72088307 -178599547 - MER5B DNA MER1_type 0 178 1 511 234 158 13 chr2 72088321 72088479 -178599375 - MER5A DNA MER1_type -6 183 3 702 247 11 23 chr2 72088490 72088664 -178599190 - MER5A DNA MER1_type -1 188 17 1740 107 0 21 chr2 72088664 72088907 -178598947 - AluSq SINE Alu -14 299 62 269 154 0 0 chr2 72090331 72090370 -178597484 - AluJo SINE Alu -14 288 250 1182 153 16 5 chr2 72090417 72090606 -178597248 - AluJo SINE Alu -56 256 66 2026 87 36 55 chr2 72090765 72091074 -178596780 + AluY SINE Alu 1 303 -8 480 49 0 0 chr2 72091341 72091402 -178596452 + MER53 DNA DNA 128 188 -1 209 57 29 0 chr2 72091953 72091988 -178595866 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 457 285 137 23 chr2 72092562 72093074 -178594780 + L1MC4a LINE L1 4309 4878 -1268 860 263 81 87 chr2 72093074 72093743 -178594111 + L1MC4a LINE L1 5305 5973 -148 1657 168 0 63 chr2 72093908 72094223 -178593631 + AluJo SINE Alu 3 297 -15 233 205 262 49 chr2 72094307 72094345 -178593509 - MIR3 SINE MIR -7 201 172 1767 186 33 33 chr2 72094345 72094710 -178593144 - MLT1A1 LTR MaLR 0 365 1 233 205 262 49 chr2 72094710 72094793 -178593061 - MIR3 SINE MIR -36 172 54 758 201 19 0 chr2 72095067 72095226 -178592628 + MER5B DNA MER1_type 7 168 -10 213 390 38 9 chr2 72095385 72095490 -178592364 + L2 LINE L2 3155 3262 -10 836 211 49 164 chr2 72095787 72096300 -178591554 + LTR37B LTR ERV1 11 464 -4 300 379 19 12 chr2 72096331 72096492 -178591362 + L2 LINE L2 2909 3070 -202 185 292 46 46 chr2 72096594 72096659 -178591195 + L2 LINE L2 3247 3311 -2 209 189 0 0 chr2 72096779 72096816 -178591038 - L2 LINE L2 -8 3264 3228 358 204 58 88 chr2 72097740 72097877 -178589977 + MIR SINE MIR 33 165 -97 954 249 27 16 chr2 72097887 72098144 -178589710 + MIR SINE MIR 3 262 0 212 189 0 0 chr2 72098146 72098183 -178589671 + (TTA)n Simple_repeat Simple_repeat 2 38 0 372 298 15 15 chr2 72098214 72098345 -178589509 - MIR SINE MIR -74 188 58 927 229 139 11 chr2 72099264 72099544 -178588310 + MER5C DNA MER1_type 9 324 0 419 349 52 5 chr2 72099819 72100011 -178587843 - MIR SINE MIR -61 201 1 270 136 0 0 chr2 72102395 72102439 -178585415 + (CA)n Simple_repeat Simple_repeat 1 44 0 186 139 0 47 chr2 72103337 72103380 -178584474 + L2 LINE L2 3272 3312 -1 1386 236 172 10 chr2 72104762 72105164 -178582690 + MLT1C LTR MaLR 1 467 0 1305 162 29 0 chr2 72105321 72105525 -178582329 - MER63A DNA MER1_type 0 210 1 498 325 50 47 chr2 72106247 72106610 -178581244 + MLT1I LTR MaLR 4 367 -42 404 323 8 0 chr2 72106731 72106861 -178580993 - MIR3 SINE MIR -7 201 71 476 321 96 5 chr2 72106961 72107179 -178580675 + MIR SINE MIR 15 252 -10 2289 113 3 0 chr2 72107956 72108265 -178579589 + AluSq SINE Alu 1 310 -3 321 130 0 0 chr2 72108353 72108407 -178579447 + L1PA13 LINE L1 6108 6161 -2 1639 165 13 20 chr2 72108561 72108864 -178578990 + AluJo SINE Alu 12 312 0 658 294 164 19 chr2 72109301 72109576 -178578278 - MLT1H LTR MaLR -110 439 93 2341 160 18 30 chr2 72109576 72109977 -178577877 + MSTD LTR MaLR 1 396 0 658 294 164 19 chr2 72109977 72110078 -178577776 - MLT1H LTR MaLR -456 93 8 739 298 40 64 chr2 72110087 72110537 -178577317 - HAL1 LINE L1 -1620 887 449 4274 148 18 9 chr2 72110645 72111322 -178576532 + MER50 LTR ERV1 29 711 -23 2281 141 41 8 chr2 72111328 72111697 -178576157 - MER34C LTR ERV1 -204 381 1 1939 168 94 70 chr2 72111913 72112246 -178575608 + L1M4 LINE L1 5269 5619 -565 2497 129 70 15 chr2 72112246 72112649 -178575205 - MSTB LTR MaLR -1 425 1 1939 168 94 70 chr2 72112649 72112814 -178575040 + L1M4 LINE L1 5619 5779 -405 1948 202 6 0 chr2 72112814 72113151 -178574703 - MER2 DNA MER2_type -1 344 6 1165 171 55 5 chr2 72114161 72114360 -178573494 + MER3 DNA MER1_type 1 209 0 216 267 0 0 chr2 72114371 72114416 -178573438 + MIR SINE MIR 85 129 -79 2177 122 57 3 chr2 72115578 72115914 -178571940 + MER34B LTR ERV1 1 354 -211 843 187 0 0 chr2 72115915 72116049 -178571805 + FRAM SINE Alu 28 161 -15 1191 113 54 0 chr2 72116052 72116223 -178571631 + MER34B LTR ERV1 349 529 -36 797 228 94 56 chr2 72116223 72116755 -178571099 - LTR48 LTR ERV1 0 787 1 772 300 34 13 chr2 72117579 72117812 -178570042 - MIR SINE MIR 0 262 25 431 257 20 0 chr2 72118013 72118114 -178569740 - MIR3 SINE MIR -7 201 99 2188 115 0 19 chr2 72118368 72118682 -178569172 + AluSg SINE Alu 1 308 -2 1535 229 52 31 chr2 72119435 72119823 -178568031 + MSTD LTR MaLR 1 396 0 7524 215 47 33 chr2 72119825 72121418 -178566436 + MSTD-int LTR MaLR 2 1622 -113 721 242 0 0 chr2 72121418 72121542 -178566312 - FLAM_A SINE Alu -9 124 1 7524 215 47 33 chr2 72121542 72121658 -178566196 + MSTD-int LTR MaLR 1622 1735 0 304 272 0 12 chr2 72121658 72121739 -178566115 + MSTD LTR MaLR 1 80 -316 5435 71 13 0 chr2 72121740 72122448 -178565406 - L1PA7 LINE L1 -1481 4665 3949 7296 67 6 1 chr2 72122448 72123921 -178563933 + L1PA7 LINE L1 4674 6151 -3 21 0 0 0 chr2 72123921 72123942 -178563912 + AT_rich Low_complexity Low_complexity 1 21 0 1928 126 0 0 chr2 72124005 72124266 -178563588 + AluSx SINE Alu 32 292 -20 1278 220 84 23 chr2 72124266 72124575 -178563279 + MSTD LTR MaLR 69 396 0 248 293 61 27 chr2 72125127 72125274 -178562580 + MER103 DNA DNA 2 153 -13 333 301 26 45 chr2 72125324 72125480 -178562374 - MIR3 SINE MIR -29 179 27 187 316 85 57 chr2 72125947 72126124 -178561730 + MIR3 SINE MIR 3 184 -24 2083 104 0 24 chr2 72126348 72126667 -178561187 + AluSx SINE Alu 2 313 0 1890 121 11 11 chr2 72126743 72127015 -178560839 + AluSq SINE Alu 38 309 -4 2274 90 13 3 chr2 72127015 72127314 -178560540 + AluY SINE Alu 1 302 -9 295 306 135 71 chr2 72127580 72127988 -178559866 + L2 LINE L2 2807 3240 -32 2048 171 152 8 chr2 72127989 72128486 -178559368 + MLT1F1 LTR MaLR 1 567 0 670 283 300 15 chr2 72128594 72129061 -178558793 + MLT1F1-int LTR MaLR 2 601 -770 7243 74 2 2 chr2 72129771 72131755 -178556099 + L1PA14 LINE L1 4170 6161 0 316 181 229 56 chr2 72131888 72132032 -178555822 + L1MC5 LINE L1 7757 7925 -36 239 277 18 36 chr2 72132637 72132749 -178555105 + GA-rich Low_complexity Low_complexity 4 113 0 249 33 0 0 chr2 72133126 72133156 -178554698 + (TA)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr2 72133895 72133915 -178553939 + (TC)n Simple_repeat Simple_repeat 1 20 0 405 0 0 0 chr2 72133921 72133966 -178553888 + (TG)n Simple_repeat Simple_repeat 2 46 0 209 245 0 0 chr2 72133966 72134010 -178553844 + CT-rich Low_complexity Low_complexity 2 45 0 581 302 81 0 chr2 72135353 72135525 -178552329 + MER117 DNA MER1_type 1 186 -11 666 321 42 0 chr2 72135659 72135871 -178551983 - MIR SINE MIR -2 260 40 576 256 118 37 chr2 72136200 72136497 -178551357 - HAL1 LINE L1 -8 2499 2179 268 255 39 39 chr2 72136587 72136689 -178551165 - HAL1b LINE L1 -501 847 746 1906 166 0 10 chr2 72136947 72137260 -178550594 - AluJo SINE Alu -2 310 1 2112 276 64 56 chr2 72137315 72138440 -178549414 - HAL1 LINE L1 -601 1906 773 25 65 0 0 chr2 72138928 72138974 -178548880 + AT_rich Low_complexity Low_complexity 1 46 0 261 311 44 38 chr2 72139309 72139492 -178548362 - L2 LINE L2 -429 2885 2702 1525 179 127 4 chr2 72139493 72139761 -178548093 - AluJb SINE Alu -1 301 1 393 295 30 66 chr2 72139833 72139999 -178547855 - MIR SINE MIR -54 208 49 2029 176 25 6 chr2 72140213 72140570 -178547284 - MER47A DNA MER2_type -1 365 2 1399 219 76 16 chr2 72140579 72141004 -178546850 + MLT1C LTR MaLR 6 467 0 414 0 0 0 chr2 72141086 72141132 -178546722 + (CA)n Simple_repeat Simple_repeat 1 46 0 275 246 0 0 chr2 72141364 72141433 -178546421 - MIR SINE MIR -41 221 153 186 205 0 0 chr2 72141417 72141456 -178546398 + L2 LINE L2 3265 3303 -10 * 291 287 21 43 chr2 72142104 72142198 -178545656 + MIR SINE MIR 16 107 -101 218 305 37 58 chr2 72142260 72142450 -178545404 + L2 LINE L2 2839 3024 -248 517 343 36 24 chr2 72143778 72144026 -178543828 + MIR SINE MIR 12 262 0 405 0 0 0 chr2 72144111 72144156 -178543698 + (CA)n Simple_repeat Simple_repeat 2 46 0 366 331 97 18 chr2 72144243 72144521 -178543333 - LTR16C LTR ERVL -14 477 178 189 417 19 32 chr2 72144948 72145104 -178542750 - L3 LINE CR1 -15 1562 1409 1313 283 112 12 chr2 72145209 72145636 -178542218 - HERV16 LTR ERVL -2329 2667 2198 2618 207 17 2 chr2 72145666 72146135 -178541719 - MER70B LTR ERVL -102 476 1 3745 272 93 64 chr2 72146135 72146871 -178540983 - HERV16 LTR ERVL -2794 2202 1489 326 44 44 0 chr2 72146871 72146916 -178540938 - MADE1 DNA Mariner 0 80 34 3745 272 93 64 chr2 72146916 72146983 -178540871 - HERV16 LTR ERVL -3507 1489 1425 884 171 0 0 chr2 72146983 72147112 -178540742 - FLAM_A SINE Alu -4 129 1 3745 272 93 64 chr2 72147112 72147941 -178539913 - HERV16 LTR ERVL -3571 1425 392 659 230 9 0 chr2 72147941 72148054 -178539800 - MER81 DNA DNA 0 114 1 3745 272 93 64 chr2 72148054 72148458 -178539396 - HERV16 LTR ERVL -4604 392 1 976 244 26 17 chr2 72148458 72148692 -178539162 - LTR16A LTR ERVL 0 450 215 1917 239 100 17 chr2 72148720 72149239 -178538615 + MER77 LTR ERV1 41 602 -3 2391 172 76 0 chr2 72149714 72150110 -178537744 - MSTB LTR MaLR 0 426 1 21 0 0 0 chr2 72150651 72150672 -178537182 + AT_rich Low_complexity Low_complexity 1 21 0 437 254 155 57 chr2 72151463 72151727 -178536127 - MER102a DNA MER1_type -9 321 32 2399 231 45 18 chr2 72151849 72152411 -178535443 - MLT1G LTR MaLR -13 577 1 654 159 65 14 chr2 72152467 72152605 -178535249 + MSTB1 LTR MaLR 288 432 0 412 234 106 35 chr2 72153400 72153541 -178534313 + L2 LINE L2 3155 3305 -8 260 209 36 27 chr2 72153581 72153691 -178534163 + (TA)n Simple_repeat Simple_repeat 2 112 0 329 218 21 133 chr2 72153842 72154030 -178533824 + MIR SINE MIR 92 258 -4 207 0 0 0 chr2 72154566 72154589 -178533265 + (A)n Simple_repeat Simple_repeat 1 23 0 462 250 162 25 chr2 72155167 72155371 -178532483 + HAL1 LINE L1 1411 1642 -865 437 271 45 0 chr2 72155585 72155718 -178532136 - MLT1J2 LTR MaLR -245 205 67 345 320 63 16 chr2 72155768 72156071 -178531783 - L1M4 LINE L1 -3699 2447 2131 455 267 228 43 chr2 72156584 72157467 -178530387 + L1MC4a LINE L1 4021 5074 -1072 1251 168 96 0 chr2 72157724 72157944 -178529910 + AluJb SINE Alu 40 280 -32 315 0 0 0 chr2 72157948 72157983 -178529871 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 634 329 117 12 chr2 72157990 72158494 -178529360 + L1MC4a LINE L1 5330 5886 -1922 327 276 55 35 chr2 72159007 72159152 -178528702 + MIR3 SINE MIR 38 185 -23 249 33 0 0 chr2 72159601 72159631 -178528223 + (CA)n Simple_repeat Simple_repeat 1 30 0 366 242 55 0 chr2 72159858 72159949 -178527905 + MIR SINE MIR 166 261 -1 2070 101 14 4 chr2 72159962 72160261 -178527593 - AluSx SINE Alu 0 302 1 1453 222 38 77 chr2 72160400 72160744 -178527110 - L1MD2 LINE L1 -2 6357 6038 619 238 16 0 chr2 72160744 72160870 -178526984 - FLAM_A SINE Alu -5 128 1 1453 222 38 77 chr2 72160870 72161030 -178526824 - L1MD2 LINE L1 -321 6038 5873 2048 100 3 63 chr2 72161111 72161461 -178526393 - L1MA2 LINE L1 -1 6303 5975 913 133 51 62 chr2 72162857 72163052 -178524802 + MER20 DNA MER1_type 27 219 0 206 371 42 21 chr2 72163113 72163256 -178524598 + MIR SINE MIR 103 248 -14 361 320 61 49 chr2 72163475 72163722 -178524132 + MLT1K LTR MaLR 174 423 -165 311 227 0 0 chr2 72163768 72163834 -178524020 + MLT1K LTR MaLR 521 586 -2 226 306 108 100 chr2 72164342 72164872 -178522982 + L2 LINE L2 150 674 -2640 264 262 60 0 chr2 72164872 72164956 -178522898 + MER91C DNA MER1_type 33 121 -19 226 306 108 100 chr2 72164956 72165412 -178522442 + L2 LINE L2 674 1228 -2086 180 265 94 60 chr2 72165543 72165660 -178522194 + L2 LINE L2 2679 2799 -515 540 278 66 82 chr2 72165766 72166205 -178521649 + L2 LINE L2 2880 3311 -2 3165 249 47 42 chr2 72166868 72167240 -178520614 - HAL1 LINE L1 -43 2464 2095 2409 90 10 0 chr2 72167240 72167541 -178520313 + AluSc SINE Alu 1 304 -5 3165 249 47 42 chr2 72167541 72168244 -178519610 - HAL1 LINE L1 -412 2095 1384 971 311 57 53 chr2 72168247 72169019 -178518835 - L1MEc LINE L1 -5531 865 91 2426 88 7 0 chr2 72169035 72169342 -178518512 - AluSx SINE Alu -2 310 2 1031 252 60 3 chr2 72169433 72169786 -178518068 - HAL1 LINE L1 -1131 1376 1004 2040 106 0 0 chr2 72169802 72170067 -178517787 + AluSx SINE Alu 35 299 -13 300 315 95 36 chr2 72170217 72170386 -178517468 + MIR3 SINE MIR 10 191 -55 981 145 28 89 chr2 72170622 72170836 -178517018 - MER20 DNA MER1_type 0 219 19 214 274 0 16 chr2 72170970 72171032 -178516822 + MIR SINE MIR 171 231 -31 2194 101 0 3 chr2 72171053 72171340 -178516514 + AluSq SINE Alu 1 286 -27 744 237 25 22 chr2 72171957 72172140 -178515714 + MLT1H1 LTR MaLR 74 253 -302 6280 144 16 8 chr2 72172173 72173651 -178514203 + L1MA8 LINE L1 4807 6291 0 686 221 226 0 chr2 72173704 72173894 -178513960 + MLT1H1 LTR MaLR 361 593 -2 2443 141 5 19 chr2 72175428 72175798 -178512056 - MLT1A1 LTR MaLR 0 365 1 1439 186 144 39 chr2 72176029 72176331 -178511523 - MLT1E1 LTR MaLR 0 654 301 1389 164 38 159 chr2 72176331 72176752 -178511102 - MLT1A2 LTR MaLR -4 370 1 1439 186 144 39 chr2 72176752 72176837 -178511017 - MLT1E1 LTR MaLR -353 301 226 226 197 227 0 chr2 72176844 72176910 -178510944 - MLT1E1 LTR MaLR -573 81 1 21 57 0 0 chr2 72177331 72177366 -178510488 + AT_rich Low_complexity Low_complexity 1 35 0 731 251 171 12 chr2 72178090 72178417 -178509437 - L3 LINE CR1 -3 1574 1196 789 188 123 0 chr2 72179308 72179478 -178508376 + MIR SINE MIR 6 196 -66 538 291 40 15 chr2 72179720 72179919 -178507935 + LTR16A1 LTR ERVL 162 365 -92 2314 102 0 0 chr2 72180082 72180375 -178507479 - AluSx SINE Alu -19 293 1 2522 118 55 3 chr2 72181287 72181633 -178506221 + THE1B LTR MaLR 1 364 0 379 223 88 40 chr2 72182519 72182667 -178505187 + MER103 DNA DNA 8 162 -4 6296 190 53 19 chr2 72182739 72184036 -178503818 + Charlie1a DNA MER1_type 1 1350 -1411 1413 166 28 0 chr2 72184036 72184253 -178503601 - MER58A DNA MER1_type 0 224 2 6296 190 53 19 chr2 72184253 72184363 -178503491 + Charlie1a DNA MER1_type 1350 1455 0 2707 170 16 2 chr2 72185630 72186076 -178501778 + LTR32 LTR ERVL 20 471 0 1271 204 60 31 chr2 72186720 72187038 -178500816 - MLT1A2 LTR MaLR 0 374 48 1189 176 5 0 chr2 72187433 72187620 -178500234 - MER5A DNA MER1_type 0 189 2 27051 136 9 18 chr2 72187684 72188642 -178499212 + L1PA8A LINE L1 292 1256 -5190 189 74 0 0 chr2 72188642 72188669 -178499185 + (CAA)n Simple_repeat Simple_repeat 1 27 0 27051 136 9 18 chr2 72188669 72190676 -178497178 + L1PA8A LINE L1 1256 3278 -3168 1828 136 3 57 chr2 72190676 72190992 -178496862 + AluSc SINE Alu 5 303 -6 27051 136 9 18 chr2 72190992 72194165 -178493689 + L1PA8A LINE L1 3278 6442 -4 1444 259 42 15 chr2 72194165 72194566 -178493288 - LTR16C LTR ERVL -79 412 1 2137 108 0 0 chr2 72195043 72195320 -178492534 + AluSg SINE Alu 2 278 -32 252 0 0 0 chr2 72195320 72195348 -178492506 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 336 48 0 0 chr2 72195655 72195697 -178492157 + (CA)n Simple_repeat Simple_repeat 1 42 0 1265 81 5 32 chr2 72196115 72196300 -178491554 + L1PA10 LINE L1 5979 6158 -10 2398 90 0 0 chr2 72197064 72197375 -178490479 - AluY SINE Alu 0 311 1 390 258 117 16 chr2 72197499 72197627 -178490227 - MER5A DNA MER1_type 0 189 49 2259 113 0 19 chr2 72197710 72198029 -178489825 - AluSq SINE Alu 0 313 1 3077 143 43 20 chr2 72198391 72198929 -178488925 - MER21A LTR ERV1 -6 925 376 1161 136 100 44 chr2 72198934 72199169 -178488685 - MER21A LTR ERV1 -667 264 13 441 0 0 0 chr2 72199169 72199218 -178488636 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 1161 136 100 44 chr2 72199218 72199232 -178488622 - MER21A LTR ERV1 -918 13 1 232 154 17 7 chr2 72199347 72199580 -178488274 + AluJo SINE Alu 1 289 -13 235 83 0 42 chr2 72199587 72199635 -178488219 + LTR66 LTR ERVL 394 439 -171 260 154 19 0 chr2 72199635 72199687 -178488167 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 315 169 70 0 chr2 72199687 72199758 -178488096 - L1MCa LINE L1 -4356 2070 1995 305 296 23 0 chr2 72199746 72199834 -178488020 - L1MC4 LINE L1 -1339 6703 6614 * 300 310 23 0 chr2 72199788 72199875 -178487979 + L1MC4 LINE L1 6614 6702 -1340 * 331 303 0 0 chr2 72199848 72199937 -178487917 - L1MC4 LINE L1 -1339 6703 6615 325 315 0 0 chr2 72199894 72199983 -178487871 + L1MC4 LINE L1 6614 6702 -1340 * 183 156 0 0 chr2 72199986 72200018 -178487836 + (TA)n Simple_repeat Simple_repeat 2 33 0 231 261 0 22 chr2 72200018 72200110 -178487744 + L1MC4 LINE L1 6614 6703 -1339 * 272 212 0 24 chr2 72200064 72200149 -178487705 - L1MC4 LINE L1 -1341 6701 6619 981 200 0 16 chr2 72200166 72200351 -178487503 - AluJo SINE Alu -24 288 107 180 0 0 0 chr2 72200370 72200390 -178487464 + (CA)n Simple_repeat Simple_repeat 1 20 0 1006 199 25 144 chr2 72201233 72201877 -178485977 + L1MC5 LINE L1 6876 7398 -563 271 248 85 91 chr2 72201925 72202136 -178485718 + L1MC5 LINE L1 7610 7820 -141 16422 67 2 12 chr2 72202136 72205190 -178482664 + L1PA6 LINE L1 3101 6137 -17 271 248 85 91 chr2 72205190 72205296 -178482558 + L1MC5 LINE L1 7820 7925 -36 2319 122 0 0 chr2 72205366 72205678 -178482176 + AluSq SINE Alu 1 312 -1 515 211 224 0 chr2 72205826 72205973 -178481881 + MER5A DNA MER1_type 10 189 0 693 201 86 11 chr2 72206092 72206266 -178481588 - MLT1B LTR MaLR 0 390 204 762 240 151 33 chr2 72206279 72206335 -178481519 - L1MEd LINE L1 -1894 4235 4187 2115 103 0 19 chr2 72206335 72206646 -178481208 - AluSg SINE Alu -3 307 3 762 240 151 33 chr2 72206646 72206926 -178480928 - L1MEd LINE L1 -1942 4187 3859 * 1389 254 103 31 chr2 72206905 72207712 -178480142 - L1MEd LINE L1 -2828 3301 2437 543 307 68 52 chr2 72207746 72207792 -178480062 - L1MEd LINE L1 -4001 2309 2265 1740 158 52 81 chr2 72207792 72208236 -178479618 + MSTB1 LTR MaLR 2 432 0 543 307 68 52 chr2 72208236 72208729 -178479125 - L1MEd LINE L1 -4045 2265 1761 6781 117 29 6 chr2 72208810 72210294 -178477560 - L1MA3 LINE L1 0 6305 4783 181 292 146 22 chr2 72210668 72210805 -178477049 - MIR SINE MIR -93 169 16 4169 146 16 3 chr2 72212128 72212874 -178474980 - L1MA3 LINE L1 -1351 4795 4040 796 285 80 40 chr2 72212916 72213772 -178474082 - L1MEd LINE L1 -4641 1669 732 1855 107 7 37 chr2 72214102 72214372 -178473482 + AluSx SINE Alu 21 282 -30 25 51 0 0 chr2 72214640 72214679 -178473175 + AT_rich Low_complexity Low_complexity 1 39 0 226 192 0 58 chr2 72215240 72215292 -178472562 - L2 LINE L2 0 3313 3265 597 229 53 6 chr2 72216354 72216524 -178471330 - MER5B DNA MER1_type 0 178 1 207 0 0 0 chr2 72217714 72217737 -178470117 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 2011 136 3 10 chr2 72219721 72220031 -178467823 + AluSx SINE Alu 1 308 -4 368 256 212 30 chr2 72220296 72220499 -178467355 + MIR SINE MIR 11 250 -12 4216 159 69 1 chr2 72221192 72221974 -178465880 + L1MC1 LINE L1 5491 6325 -8 23 0 0 0 chr2 72221975 72221998 -178465856 + AT_rich Low_complexity Low_complexity 1 23 0 2277 103 13 0 chr2 72222219 72222521 -178465333 + AluSq SINE Alu 1 306 -7 23 0 0 0 chr2 72224017 72224040 -178463814 + AT_rich Low_complexity Low_complexity 1 23 0 820 132 28 35 chr2 72224129 72224273 -178463581 - FLAM_C SINE Alu 0 143 1 1484 47 0 16 chr2 72224301 72224491 -178463363 - AluSp SINE Alu 0 313 127 2357 92 3 0 chr2 72224521 72224825 -178463029 + AluSx SINE Alu 1 305 -7 2273 166 86 0 chr2 72225395 72225816 -178462038 - MLT1C LTR MaLR -7 460 4 310 239 42 0 chr2 72225869 72225940 -178461914 + L2 LINE L2 3227 3300 -13 201 74 0 0 chr2 72225940 72225967 -178461887 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 197 217 50 33 chr2 72228482 72228542 -178459312 + L2 LINE L2 3252 3312 -1 23 0 0 0 chr2 72230109 72230132 -178457722 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 72230271 72230294 -178457560 + GC_rich Low_complexity Low_complexity 1 23 0 298 293 106 41 chr2 72230580 72230703 -178457151 - L2 LINE L2 -8 3264 3134 247 269 0 15 chr2 72231298 72231365 -178456489 + L2 LINE L2 2728 2793 -521 795 280 68 50 chr2 72231386 72231786 -178456068 + L2 LINE L2 2906 3312 -1 2383 66 0 0 chr2 72231893 72232180 -178455674 + AluY SINE Alu 23 309 -2 25 0 0 0 chr2 72232489 72232514 -178455340 + AT_rich Low_complexity Low_complexity 1 25 0 201 196 0 0 chr2 72233860 72233906 -178453948 + GA-rich Low_complexity Low_complexity 3 48 0 738 155 65 26 chr2 72235015 72235190 -178452664 - AluJb SINE Alu 0 301 121 585 297 57 6 chr2 72235794 72235969 -178451885 + MIR3 SINE MIR 16 199 -9 2265 97 3 3 chr2 72236358 72236656 -178451198 + AluSx SINE Alu 1 298 -14 304 306 55 27 chr2 72236876 72237095 -178450759 + L1MC/D LINE L1 3351 3575 -2571 364 225 330 0 chr2 72237424 72237615 -178450239 + L1MC/D LINE L1 5419 5672 -2136 2603 245 178 22 chr2 72237631 72238680 -178449174 + L2 LINE L2 1580 2792 -522 1070 189 14 22 chr2 72238680 72238902 -178448952 + AluJo SINE Alu 1 220 -92 578 264 136 42 chr2 72238972 72239400 -178448454 + L2 LINE L2 2778 3238 -75 258 380 0 0 chr2 72239440 72239577 -178448277 + L1MC/D LINE L1 5717 5853 -1955 23 33 0 0 chr2 72239809 72239839 -178448015 + AT_rich Low_complexity Low_complexity 1 30 0 321 290 284 6 chr2 72240353 72240515 -178447339 - MIR SINE MIR -21 241 35 462 333 98 48 chr2 72240792 72241531 -178446323 + L2 LINE L2 2453 3222 -50 383 287 47 16 chr2 72241532 72241661 -178446193 - MER94 DNA DNA -1 133 1 1170 233 69 21 chr2 72241742 72242120 -178445734 - MLT2C1 LTR ERVL 0 397 2 1674 162 10 67 chr2 72242120 72242410 -178445444 + AluJo SINE Alu 1 296 -16 24 0 0 0 chr2 72242410 72242434 -178445420 + AT_rich Low_complexity Low_complexity 1 24 0 1025 246 42 73 chr2 72242549 72243219 -178444635 + L1MC5 LINE L1 7127 7775 -186 1791 114 80 8 chr2 72243577 72243841 -178444013 - AluSg SINE Alu -26 284 2 710 317 89 23 chr2 72244006 72244584 -178443270 + L1MC4a LINE L1 5285 5909 -1899 2031 98 14 28 chr2 72244589 72244897 -178442957 - AluSq SINE Alu 0 304 1 25 83 0 0 chr2 72245069 72245129 -178442725 + AT_rich Low_complexity Low_complexity 1 60 0 216 262 0 0 chr2 72245585 72245627 -178442227 - MIR SINE MIR -3 259 218 232 322 157 0 chr2 72245637 72245752 -178442102 - L2 LINE L2 -6 3266 3134 248 192 260 39 chr2 72245935 72246039 -178441815 - MIR SINE MIR -87 175 49 2471 263 62 46 chr2 72246408 72246429 -178441425 + L2 LINE L2 1776 1795 -1477 1752 176 126 8 chr2 72246429 72246809 -178441045 - MSTB LTR MaLR -1 425 1 2471 263 62 46 chr2 72246809 72247800 -178440054 + L2 LINE L2 1795 3099 -173 2089 104 17 3 chr2 72247800 72248087 -178439767 + AluSx SINE Alu 1 291 -21 183 162 0 0 chr2 72248100 72248137 -178439717 + (CAGGG)n Simple_repeat Simple_repeat 3 39 0 270 125 0 0 chr2 72248142 72248190 -178439664 + (TAAAA)n Simple_repeat Simple_repeat 3 50 0 247 213 16 0 chr2 72248191 72248252 -178439602 + L2 LINE L2 2703 2764 -550 285 210 160 10 chr2 72249025 72249125 -178438729 + MIR SINE MIR 148 262 0 1143 45 52 0 chr2 72249480 72249635 -178438219 + L1MA2 LINE L1 6135 6297 -7 26 0 0 0 chr2 72249635 72249661 -178438193 + AT_rich Low_complexity Low_complexity 1 26 0 526 218 170 6 chr2 72250824 72250989 -178436865 - MER5C DNA MER1_type -6 318 127 37838 66 8 23 chr2 72251223 72257471 -178430383 + L1PA5 LINE L1 1 6153 -1 532 276 79 56 chr2 72257498 72257853 -178430001 + L1ME4a LINE L1 5601 5963 -158 563 266 0 0 chr2 72258778 72258902 -178428952 - MER5C DNA MER1_type -200 124 1 558 269 19 19 chr2 72259130 72259286 -178428568 + MIR SINE MIR 107 262 0 1727 216 40 95 chr2 72259450 72259872 -178427982 + L1MC4 LINE L1 7067 7511 -531 1334 179 6 97 chr2 72259872 72260201 -178427653 - AluJo SINE Alu -13 299 1 1727 216 40 95 chr2 72260201 72260695 -178427159 + L1MC4 LINE L1 7511 7997 -45 240 128 85 0 chr2 72260696 72260743 -178427111 - MADE1 DNA Mariner -28 52 2 2073 96 68 71 chr2 72261621 72261986 -178425868 + THE1B LTR MaLR 1 364 0 23 0 0 0 chr2 72262372 72262395 -178425459 + AT_rich Low_complexity Low_complexity 1 23 0 1903 147 0 52 chr2 72262481 72262807 -178425047 + AluJb SINE Alu 3 311 -1 3308 107 34 8 chr2 72263010 72263504 -178424350 + MER84 LTR ERV1 1 507 0 1793 152 11 0 chr2 72263742 72264005 -178423849 - AluSx SINE Alu -34 278 13 503 262 105 63 chr2 72264783 72265069 -178422785 + MLT1H LTR MaLR 35 332 -217 1546 176 43 63 chr2 72265186 72265584 -178422270 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr2 72266752 72266774 -178421080 + AT_rich Low_complexity Low_complexity 1 22 0 1228 167 39 8 chr2 72266838 72267095 -178420759 + L1MD3 LINE L1 7730 7994 -1 225 171 24 0 chr2 72267988 72268029 -178419825 - Alu SINE Alu -258 42 1 2055 130 27 7 chr2 72269375 72269675 -178418179 + AluSx SINE Alu 3 308 -4 2057 154 48 15 chr2 72270159 72270554 -178417300 + MLT1C LTR MaLR 12 419 -48 3686 120 23 4 chr2 72270554 72271071 -178416783 + MER1A DNA MER1_type 1 527 0 258 241 138 0 chr2 72271205 72271230 -178416624 - L1MA10 LINE L1 0 6334 6310 1094 244 193 16 chr2 72271230 72271739 -178416115 - L1ME3 LINE L1 -16 6146 5548 789 186 96 23 chr2 72271757 72271934 -178415920 - MER58C DNA MER1_type 0 215 26 1164 243 16 34 chr2 72271946 72272267 -178415587 - MLT2F LTR ERVL 0 663 349 732 180 13 2 chr2 72272281 72272447 -178415407 - L1M2 LINE L1 -651 5513 5349 270 0 0 0 chr2 72272451 72272481 -178415373 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 1818 175 0 16 chr2 72272517 72272826 -178415028 + AluJb SINE Alu 1 304 -8 533 239 94 0 chr2 72272935 72273073 -178414781 + MIR SINE MIR 46 196 -66 188 138 0 0 chr2 72273134 72273163 -178414691 + L2 LINE L2 3266 3294 -19 192 77 0 0 chr2 72273281 72273307 -178414547 + (TTG)n Simple_repeat Simple_repeat 2 27 0 346 331 74 14 chr2 72273311 72273459 -178414395 - HAL1 LINE L1 -744 1763 1607 768 177 50 22 chr2 72273913 72274094 -178413760 - MER5A DNA MER1_type 0 189 4 1768 148 13 42 chr2 72274408 72274718 -178413136 + AluJb SINE Alu 1 301 -11 222 295 0 39 chr2 72274844 72274973 -178412881 + T-rich Low_complexity Low_complexity 5 128 0 307 288 63 0 chr2 72275914 72276025 -178411829 + MIR SINE MIR 116 233 -29 511 168 0 40 chr2 72278636 72278737 -178409117 + MER96B DNA MER1_type? 4 100 -317 527 217 84 18 chr2 72278766 72278932 -178408922 - MER96B DNA MER1_type? -239 178 2 294 255 31 81 chr2 72278934 72278993 -178408861 - L3b LINE CR1 -166 1417 1357 1001 122 99 70 chr2 72278993 72279206 -178408648 - MER20 DNA MER1_type 0 219 1 294 255 31 81 chr2 72279206 72279307 -178408547 - L3b LINE CR1 -226 1357 1265 638 267 122 76 chr2 72280131 72280592 -178407262 - LTR67 LTR ERVL 0 557 76 584 280 66 28 chr2 72280668 72280879 -178406975 + MIR SINE MIR 28 246 -16 243 0 0 0 chr2 72280891 72280918 -178406936 + (TG)n Simple_repeat Simple_repeat 2 28 0 251 308 0 0 chr2 72283541 72283619 -178404235 - Charlie8 DNA MER1_type 0 2417 2340 1862 130 0 7 chr2 72283706 72283975 -178403879 + AluSx SINE Alu 45 311 -1 204 184 0 41 chr2 72284178 72284227 -178403627 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 267 79 0 0 chr2 72284579 72284617 -178403237 + (TC)n Simple_repeat Simple_repeat 2 39 0 207 0 0 0 chr2 72284617 72284640 -178403214 + (CA)n Simple_repeat Simple_repeat 1 23 0 1859 138 0 56 chr2 72284750 72285054 -178402800 + AluJo SINE Alu 1 287 -25 2188 123 10 0 chr2 72285139 72285440 -178402414 - AluSx SINE Alu -8 304 1 521 237 92 78 chr2 72286324 72286415 -178401439 + LTR16A1 LTR ERVL 159 247 -210 884 209 55 15 chr2 72286415 72286616 -178401238 - MER3 DNA MER1_type 0 209 1 521 237 92 78 chr2 72286616 72286819 -178401035 + LTR16A1 LTR ERVL 247 457 0 846 134 0 0 chr2 72287482 72287601 -178400253 - AluSq/x SINE Alu -194 119 1 1787 182 178 21 chr2 72287662 72288232 -178399622 - L1ME2 LINE L1 -47 6117 5463 586 234 178 24 chr2 72288267 72288643 -178399211 - L1ME2 LINE L1 -857 5289 4856 200 229 21 0 chr2 72288712 72288760 -178399094 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 261 211 14 14 chr2 72289264 72289335 -178398519 + MLT1K LTR MaLR 518 588 0 901 235 44 12 chr2 72289685 72289936 -178397918 - MIR SINE MIR 0 262 4 1458 216 59 8 chr2 72290700 72291236 -178396618 + MLT2F LTR ERVL 6 608 -55 2107 81 3 58 chr2 72292152 72292450 -178395404 + AluSx SINE Alu 1 283 -29 463 18 0 0 chr2 72292450 72292505 -178395349 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 227 284 0 0 chr2 72292635 72292651 -178395203 + AluYb8 SINE Alu 119 134 -174 2233 120 7 0 chr2 72292651 72292959 -178394895 + AluSx SINE Alu 1 310 -2 337 286 60 23 chr2 72293168 72293301 -178394553 + MIR SINE MIR 3 140 -122 1070 177 63 8 chr2 72293341 72293578 -178394276 + MSTB2 LTR MaLR 1 250 -207 226 345 120 30 chr2 72293890 72294258 -178393596 + L2 LINE L2 2260 2660 -654 1320 126 70 5 chr2 72294414 72294628 -178393226 - MER2 DNA MER2_type -2 343 116 933 63 47 0 chr2 72294619 72294746 -178393108 - MSTA LTR MaLR -295 133 1 * 734 273 54 5 chr2 72295003 72295208 -178392646 - MIR SINE MIR -38 224 10 2169 119 13 7 chr2 72295893 72296203 -178391651 - AluSx SINE Alu 0 312 1 1646 136 94 0 chr2 72296537 72296802 -178391052 - AluJo SINE Alu -18 294 5 1357 164 26 0 chr2 72296891 72297122 -178390732 - AluSx SINE Alu -75 237 1 29 28 0 0 chr2 72297123 72297159 -178390695 + AT_rich Low_complexity Low_complexity 1 36 0 231 266 177 32 chr2 72297252 72297376 -178390478 + L1ME LINE L1 5755 5896 -225 258 226 36 71 chr2 72298653 72298737 -178389117 + MER5A DNA MER1_type 55 135 -54 679 132 0 35 chr2 72298780 72298894 -178388960 + AluJb SINE Alu 203 312 0 457 264 129 17 chr2 72298903 72299081 -178388773 - Charlie7 DNA MER1_type -338 2274 2077 1141 162 0 15 chr2 72299411 72299608 -178388246 + MSTB2 LTR MaLR 264 457 0 437 208 71 32 chr2 72299646 72299800 -178388054 - MLT1J LTR MaLR -54 457 298 373 246 100 8 chr2 72299798 72299928 -178387926 - MLT1J LTR MaLR -365 146 5 * 2146 99 7 0 chr2 72300168 72300452 -178387402 + AluSx SINE Alu 17 302 -10 202 229 188 31 chr2 72300454 72300550 -178387304 + MIR SINE MIR 152 262 0 2244 117 3 3 chr2 72300648 72300957 -178386897 - AluSx SINE Alu -2 310 2 2371 74 0 0 chr2 72301923 72302231 -178385623 + AluSp SINE Alu 1 308 0 480 304 119 27 chr2 72303572 72303832 -178384022 + MLT1J LTR MaLR 23 306 -205 292 139 0 0 chr2 72303840 72303883 -178383971 + MLT1J LTR MaLR 461 503 -8 1545 156 92 18 chr2 72303991 72304274 -178383580 - AluJb SINE Alu -8 304 1 2070 118 3 10 chr2 72304301 72304598 -178383256 + AluSx SINE Alu 1 295 -17 314 261 181 22 chr2 72306855 72306993 -178380861 + MER117 DNA MER1_type 4 163 -34 328 200 0 27 chr2 72307035 72307110 -178380744 + HsTC2 DNA Tc2 3 75 -1823 240 218 55 0 chr2 72307117 72307172 -178380682 + MLT1G1 LTR MaLR 6 63 -532 2373 102 0 3 chr2 72307172 72307485 -178380369 - AluSx SINE Alu 0 312 1 866 171 0 51 chr2 72307563 72307721 -178380133 + FRAM SINE Alu 1 147 -29 1385 262 103 26 chr2 72307746 72308212 -178379642 + MLT1G1 LTR MaLR 94 595 0 332 146 36 0 chr2 72308212 72308264 -178379590 + HsTC2 DNA Tc2 90 143 -1755 1274 204 91 74 chr2 72308272 72308509 -178379345 + HsTC2 DNA Tc2 1287 1519 -379 2085 108 21 0 chr2 72308509 72308796 -178379058 - L1PB1 LINE L1 0 6151 5859 1274 204 91 74 chr2 72308796 72308989 -178378865 + HsTC2 DNA Tc2 1519 1900 2 2214 93 29 29 chr2 72309164 72309476 -178378378 + AluSx SINE Alu 1 312 0 2356 87 0 3 chr2 72310310 72310609 -178377245 - AluSg SINE Alu -12 298 1 2378 76 7 10 chr2 72311094 72311397 -178376457 - AluY SINE Alu -9 302 1 2038 122 4 0 chr2 72312604 72312883 -178374971 + AluSx SINE Alu 1 280 -32 207 0 0 0 chr2 72313242 72313265 -178374589 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 345 188 0 0 chr2 72314333 72314397 -178373457 - L1MC1 LINE L1 -5 6328 6265 222 91 0 0 chr2 72314670 72314703 -178373151 + (GA)n Simple_repeat Simple_repeat 1 33 0 1883 163 3 13 chr2 72315066 72315373 -178372481 + AluJo SINE Alu 1 304 -8 2372 86 0 0 chr2 72316720 72317010 -178370844 + AluSg SINE Alu 1 290 -20 2316 78 0 3 chr2 72317026 72317336 -178370518 + AluY SINE Alu 1 309 0 2372 146 33 13 chr2 72318196 72318594 -178369260 + MSTB LTR MaLR 1 406 -20 1830 59 0 75 chr2 72318707 72318960 -178368894 + AluY SINE Alu 71 304 -7 3337 170 94 25 chr2 72319419 72320142 -178367712 + L1MB8 LINE L1 5405 6177 -1 1207 162 99 43 chr2 72320653 72320955 -178366899 - MER33 DNA MER1_type -5 319 1 2180 110 0 53 chr2 72320996 72321314 -178366540 + AluSq SINE Alu 2 302 -11 2188 102 0 0 chr2 72321761 72322086 -178365768 + AluSx SINE Alu 1 325 0 226 292 14 0 chr2 72322098 72322170 -178365684 + L1MC/D LINE L1 5679 5751 -2057 293 156 0 91 chr2 72322380 72322457 -178365397 + MLT2D LTR ERVL 345 414 0 883 158 71 167 chr2 72322534 72322845 -178365009 - MLT1B LTR MaLR -152 238 1 704 316 30 4 chr2 72323830 72324061 -178363793 - MIR SINE MIR -25 237 1 1864 141 143 79 chr2 72324114 72324519 -178363335 - MSTB1 LTR MaLR -1 431 1 1344 250 86 16 chr2 72324732 72325232 -178362622 - L1ME3A LINE L1 -219 5951 5417 3172 138 11 4 chr2 72325329 72325787 -178362067 + LOR1b LTR ERV1 1 461 0 298 280 103 44 chr2 72325792 72326282 -178361572 - L1M4c LINE L1 -794 1949 1279 1724 173 11 18 chr2 72326416 72326700 -178361154 + AluJo SINE Alu 1 282 -30 284 48 24 0 chr2 72326723 72326765 -178361089 + (TA)n Simple_repeat Simple_repeat 1 43 0 1686 193 87 61 chr2 72327040 72327290 -178360564 - MLT1D LTR MaLR 0 505 263 387 0 0 0 chr2 72327290 72327333 -178360521 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 842 147 0 0 chr2 72327342 72327458 -178360396 - FLAM_C SINE Alu -17 116 1 1686 193 87 61 chr2 72327458 72327630 -178360224 - MLT1D LTR MaLR -249 256 56 2660 144 17 12 chr2 72327630 72328039 -178359815 + LTR57 LTR ERVL 1 411 0 1686 193 87 61 chr2 72328039 72328097 -178359757 - MLT1D LTR MaLR -449 56 1 725 297 80 58 chr2 72328104 72328602 -178359252 + MLT1J LTR MaLR 1 509 -2 772 240 104 25 chr2 72329385 72329702 -178358152 - L1MC4a LINE L1 -1905 5903 5562 501 314 126 57 chr2 72329722 72330200 -178357654 + MLT1J LTR MaLR 1 511 0 183 129 0 0 chr2 72330466 72330497 -178357357 + (CA)n Simple_repeat Simple_repeat 2 32 0 349 100 0 0 chr2 72331138 72331188 -178356666 + AluJ/FLAM SINE Alu 29 78 -224 2134 118 0 20 chr2 72331199 72331525 -178356329 + AluSx SINE Alu 1 320 0 227 267 216 9 chr2 72331527 72331643 -178356211 + MIR SINE MIR 117 256 -6 393 39 0 0 chr2 72332640 72332691 -178355163 + (TA)n Simple_repeat Simple_repeat 1 51 0 881 225 38 8 chr2 72332720 72332960 -178354894 - AluSg SINE Alu -35 275 29 1573 135 4 25 chr2 72333225 72333499 -178354355 - AluSg SINE Alu -42 268 1 1760 139 21 7 chr2 72333674 72333962 -178353892 + AluJo SINE Alu 2 293 -19 1958 126 25 0 chr2 72333965 72334089 -178353765 + AluSx SINE Alu 1 120 -192 351 0 0 0 chr2 72334089 72334128 -178353726 + (CA)n Simple_repeat Simple_repeat 2 40 0 1958 126 25 0 chr2 72334128 72334289 -178353565 + AluSx SINE Alu 120 293 -19 203 288 82 0 chr2 72334469 72334542 -178353312 - MIR SINE MIR -86 122 44 862 284 68 17 chr2 72334651 72334943 -178352911 + MLT1K LTR MaLR 146 452 -136 2249 112 0 0 chr2 72335597 72335893 -178351961 + AluSx SINE Alu 1 296 -16 23 0 0 0 chr2 72336147 72336170 -178351684 + AT_rich Low_complexity Low_complexity 1 23 0 251 296 61 35 chr2 72337921 72338036 -178349818 - L2 LINE L2 -4 3268 3151 21 0 0 0 chr2 72338691 72338712 -178349142 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 72339986 72340014 -178347840 + AT_rich Low_complexity Low_complexity 1 28 0 2298 112 0 0 chr2 72340068 72340380 -178347474 + AluSx SINE Alu 1 312 0 791 291 120 14 chr2 72340788 72341202 -178346652 + L2 LINE L2 2786 3241 -72 250 286 63 23 chr2 72341396 72341573 -178346281 - MIR SINE MIR -3 259 77 721 280 59 5 chr2 72342643 72342829 -178345025 - MER91A DNA MER1_type 0 196 1 204 40 0 0 chr2 72342964 72342989 -178344865 + (A)n Simple_repeat Simple_repeat 1 25 0 417 210 84 201 chr2 72343084 72343298 -178344556 + MER5B DNA MER1_type 1 189 0 2255 88 3 10 chr2 72343364 72343670 -178344184 - AluSc SINE Alu -5 304 1 2563 56 0 0 chr2 72343859 72344163 -178343691 - AluY SINE Alu -6 305 2 243 202 169 0 chr2 72344177 72344266 -178343588 + L1ME4a LINE L1 6002 6105 -16 1794 126 36 36 chr2 72344388 72344690 -178343164 - AluJb SINE Alu -10 302 1 417 141 28 0 chr2 72344717 72344788 -178343066 + AluJ/FRAM SINE Alu 226 298 -14 2348 112 0 6 chr2 72344828 72345142 -178342712 + AluSx SINE Alu 1 312 0 606 205 45 0 chr2 72345177 72345333 -178342521 + FRAM SINE Alu 10 172 -4 1634 132 58 74 chr2 72345433 72345744 -178342110 + AluJb SINE Alu 1 306 -6 517 176 0 0 chr2 72347918 72348009 -178339845 - Tigger3(Golem) DNA MER2_type -19 3010 2920 419 215 0 0 chr2 72348141 72348220 -178339634 - Tigger3(Golem) DNA MER2_type -2950 79 1 225 0 0 0 chr2 72348282 72348307 -178339547 + (TG)n Simple_repeat Simple_repeat 2 26 0 299 140 20 0 chr2 72348322 72348372 -178339482 - AluS SINE Alu -29 273 223 1141 114 19 0 chr2 72348375 72348533 -178339321 - AluSq SINE Alu -152 161 1 2362 65 0 7 chr2 72348992 72349282 -178338572 - AluY SINE Alu -8 303 16 395 276 102 24 chr2 72349741 72349868 -178337986 - MIR3 SINE MIR -27 181 45 198 351 53 46 chr2 72350023 72350174 -178337680 + MIR SINE MIR 108 259 -3 238 322 50 16 chr2 72350240 72350361 -178337493 - L2 LINE L2 -1042 2272 2148 25 0 0 0 chr2 72350874 72350899 -178336955 + GC_rich Low_complexity Low_complexity 1 25 0 1976 152 0 13 chr2 72351101 72351403 -178336451 + AluSx SINE Alu 1 298 -14 1633 180 57 0 chr2 72352034 72352351 -178335503 - MER47A DNA MER2_type -31 335 1 2249 88 3 0 chr2 72352498 72352781 -178335073 + AluSx SINE Alu 1 284 -28 405 54 0 0 chr2 72352781 72352837 -178335017 + (CATA)n Simple_repeat Simple_repeat 2 57 0 1784 166 20 3 chr2 72353456 72353752 -178334102 + AluJb SINE Alu 1 301 -11 1678 178 17 14 chr2 72353765 72354058 -178333796 + AluJo SINE Alu 3 296 -16 418 230 0 0 chr2 72354081 72354168 -178333686 - Tigger5 DNA MER2_type 0 2323 2237 234 269 26 39 chr2 72354215 72354293 -178333561 - Tigger5 DNA MER2_type -2246 77 1 2471 52 10 3 chr2 72354330 72354639 -178333215 + AluYa5 SINE Alu 1 311 0 1272 123 6 0 chr2 72354639 72354810 -178333044 + AluSg/x SINE Alu 129 300 -10 695 168 46 0 chr2 72354811 72354942 -178332912 + AluSq/x SINE Alu 1 137 -176 1261 209 69 11 chr2 72355069 72355432 -178332422 - L1ME1 LINE L1 -5 6161 5778 10682 122 42 5 chr2 72355433 72357220 -178330634 - Tigger2 DNA MER2_type -2 2716 863 3216 180 38 34 chr2 72357220 72357937 -178329917 - MER49 LTR ERV1 0 923 204 4139 153 40 49 chr2 72357955 72358159 -178329695 - Tigger2 DNA MER2_type -1835 883 679 2249 115 0 3 chr2 72358159 72358471 -178329383 - AluY SINE Alu 0 311 1 4139 153 40 49 chr2 72358471 72359157 -178328697 - Tigger2 DNA MER2_type -2039 679 1 396 136 31 11 chr2 72359157 72359258 -178328596 - L1ME1 LINE L1 -379 5783 5677 285 271 76 42 chr2 72359540 72359658 -178328196 + L2 LINE L2 1716 1837 -1477 592 253 129 62 chr2 72359660 72359708 -178328146 - HAL1 LINE L1 -4 2503 2460 2511 59 0 3 chr2 72359708 72360012 -178327842 + AluY SINE Alu 1 303 -8 592 253 129 62 chr2 72360012 72360608 -178327246 - HAL1 LINE L1 -47 2460 1816 422 257 154 6 chr2 72360643 72360818 -178327036 - HAL1 LINE L1 -2262 245 45 374 243 221 17 chr2 72360854 72361035 -178326819 - L2 LINE L2 -337 2977 2760 1773 247 166 25 chr2 72361037 72361750 -178326104 - L2 LINE L2 -2260 1054 242 278 237 348 10 chr2 72361915 72362063 -178325791 + MIR SINE MIR 50 243 -19 577 79 124 0 chr2 72362243 72362332 -178325522 - L1MB7 LINE L1 -16 6168 6069 233 167 0 0 chr2 72362431 72362485 -178325369 - FAM SINE Alu 0 179 126 909 200 0 12 chr2 72362496 72362661 -178325193 - AluJo SINE Alu -149 163 1 2342 102 0 0 chr2 72362920 72363224 -178324630 - AluSg SINE Alu -6 304 1 189 0 0 0 chr2 72363634 72363655 -178324199 + (T)n Simple_repeat Simple_repeat 1 21 0 1199 180 138 32 chr2 72363713 72364024 -178323830 - MER2 DNA MER2_type 0 344 1 27 92 0 0 chr2 72364471 72364547 -178323307 + AT_rich Low_complexity Low_complexity 1 76 0 2049 125 0 10 chr2 72364610 72364905 -178322949 - AluJb SINE Alu -20 292 1 406 148 337 0 chr2 72365115 72365216 -178322638 - Tigger5 DNA MER2_type 0 2323 2189 219 139 0 0 chr2 72365398 72365434 -178322420 + (TA)n Simple_repeat Simple_repeat 2 37 0 2896 241 99 42 chr2 72365453 72365892 -178321962 - L1M4 LINE L1 -1328 4818 4406 2159 112 3 0 chr2 72365892 72366177 -178321677 - AluY SINE Alu -23 288 3 2896 241 99 42 chr2 72366177 72367208 -178320646 - L1M4 LINE L1 -1740 4406 3264 207 280 196 42 chr2 72367415 72367558 -178320296 - MIR3 SINE MIR -4 204 40 788 289 158 13 chr2 72368403 72368853 -178319001 - HAL1 LINE L1 -592 1915 1401 2210 122 0 0 chr2 72369306 72369641 -178318213 - AluSx SINE Alu 0 312 1 1563 50 0 0 chr2 72369709 72369889 -178317965 - AluY SINE Alu -2 309 130 2231 105 3 0 chr2 72370236 72370531 -178317323 + AluSq SINE Alu 1 296 -17 200 182 0 18 chr2 72371227 72371282 -178316572 + (TA)n Simple_repeat Simple_repeat 2 55 0 994 298 4 4 chr2 72371375 72371637 -178316217 + MIR SINE MIR 1 262 0 269 189 0 19 chr2 72371752 72371805 -178316049 - L2 LINE L2 -4 3268 3217 541 175 158 46 chr2 72371979 72372159 -178315695 - L1MC5 LINE L1 -36 7925 7700 2108 102 34 3 chr2 72372159 72372452 -178315402 - AluSp SINE Alu -11 302 1 541 175 158 46 chr2 72372452 72372556 -178315298 - L1MC5 LINE L1 -261 7700 7609 2323 58 10 0 chr2 72372740 72373032 -178314822 - AluSp SINE Alu -17 296 2 236 330 34 23 chr2 72373510 72373598 -178314256 + L2 LINE L2 3000 3088 -184 2124 101 11 3 chr2 72374790 72375076 -178312778 + AluSq SINE Alu 2 289 -24 743 180 105 23 chr2 72375241 72375413 -178312441 - MER58A DNA MER1_type -1 223 38 37 32 0 16 chr2 72375543 72375568 -178312286 + AT_rich Low_complexity Low_complexity 1 25 -36 1774 153 62 0 chr2 72375568 72375843 -178312011 + AluSx SINE Alu 1 292 -20 37 32 0 16 chr2 72375843 72375879 -178311975 + AT_rich Low_complexity Low_complexity 25 61 0 2287 35 11 3 chr2 72375992 72376278 -178311576 + AluYa5 SINE Alu 1 288 -23 2125 88 4 0 chr2 72377413 72377686 -178310168 + AluY SINE Alu 38 311 0 1429 206 4 18 chr2 72377769 72378041 -178309813 + AluJb SINE Alu 1 268 -44 189 361 59 35 chr2 72378151 72378320 -178309534 - L2 LINE L2 -294 3019 2847 845 211 0 0 chr2 72379066 72379227 -178308627 + MER46A DNA MER2_type 1 161 -75 7754 132 31 17 chr2 72379227 72379422 -178308432 - Tigger1 DNA MER2_type 0 2418 2227 2541 53 0 3 chr2 72379422 72379723 -178308131 + AluY SINE Alu 1 300 -11 7754 132 31 17 chr2 72379723 72380378 -178307476 - Tigger1 DNA MER2_type -191 2227 1541 2020 150 0 0 chr2 72380378 72380678 -178307176 - AluSx SINE Alu -12 300 1 7754 132 31 17 chr2 72380678 72381148 -178306706 - Tigger1 DNA MER2_type -877 1541 1079 5130 135 51 3 chr2 72381158 72382044 -178305810 - Tigger1 DNA MER2_type -1490 928 1 5677 108 19 11 chr2 72382044 72383596 -178304258 + L1PA15 LINE L1 4557 6162 -3 395 163 0 25 chr2 72383610 72383690 -178304164 + MER46A DNA MER2_type 159 236 0 35 0 0 0 chr2 72384752 72384787 -178303067 + AT_rich Low_complexity Low_complexity 1 35 0 287 308 115 43 chr2 72384817 72385138 -178302716 + MLT1J2 LTR MaLR 40 413 -37 261 0 0 0 chr2 72385309 72385338 -178302516 + (CA)n Simple_repeat Simple_repeat 2 30 0 27 29 0 0 chr2 72385551 72385585 -178302269 + AT_rich Low_complexity Low_complexity 1 34 0 185 229 71 29 chr2 72387354 72387424 -178300430 + L2 LINE L2 2715 2787 -527 890 281 95 35 chr2 72388393 72388992 -178298862 + L1ME1 LINE L1 180 814 -5582 925 170 17 129 chr2 72389003 72389297 -178298557 + L1MB5 LINE L1 5839 6099 -75 1077 206 14 18 chr2 72389297 72389347 -178298507 + AluJb SINE Alu 85 134 -178 2136 104 7 10 chr2 72389347 72389644 -178298210 + AluSx SINE Alu 1 296 -16 1077 206 14 18 chr2 72389644 72389811 -178298043 + AluJb SINE Alu 134 301 -11 260 91 109 18 chr2 72389811 72389866 -178297988 + L1MB5 LINE L1 6107 6166 -8 1422 251 133 28 chr2 72389888 72390632 -178297222 + L1ME1 LINE L1 1296 2145 -4251 1993 198 104 19 chr2 72390632 72391111 -178296743 + MLT2B1 LTR ERVL 1 520 0 1422 251 133 28 chr2 72391111 72391234 -178296620 + L1ME1 LINE L1 2145 2254 -4142 3374 226 111 27 chr2 72391288 72391411 -178296443 + L1ME1 LINE L1 3643 3754 -2461 2029 140 7 7 chr2 72391411 72391719 -178296135 + AluSx SINE Alu 1 308 -4 3374 226 111 27 chr2 72391719 72392676 -178295178 + L1ME1 LINE L1 3754 4848 -1367 2250 99 3 10 chr2 72392676 72392978 -178294876 + AluSx SINE Alu 1 300 -12 3374 226 111 27 chr2 72392978 72393167 -178294687 + L1ME1 LINE L1 4848 5020 -1195 2211 191 91 123 chr2 72393150 72393376 -178294478 + L1ME1 LINE L1 5378 5610 -625 * 2005 224 76 50 chr2 72393376 72393982 -178293872 + MLT1E3 LTR MaLR 1 622 -2 2211 191 91 123 chr2 72393982 72394636 -178293218 + L1ME1 LINE L1 5610 6230 -5 2862 250 152 39 chr2 72396099 72397331 -178290523 - L1MDa LINE L1 -1825 4715 3050 1266 200 51 18 chr2 72397331 72397606 -178290248 - AluJo SINE Alu -24 288 5 2862 250 152 39 chr2 72397606 72398161 -178289693 - L1MDa LINE L1 -3490 3050 2559 438 222 0 0 chr2 72398162 72398263 -178289591 + (TATG)n Simple_repeat Simple_repeat 3 106 -4 402 21 0 0 chr2 72398263 72398310 -178289544 + (CA)n Simple_repeat Simple_repeat 2 48 0 438 222 0 0 chr2 72398310 72398316 -178289538 + (TATG)n Simple_repeat Simple_repeat 105 110 0 1496 169 55 4 chr2 72398316 72398588 -178289266 - AluJb SINE Alu -26 286 1 3604 175 109 14 chr2 72398588 72399685 -178288169 - L1MDa LINE L1 -4067 2473 1223 2037 231 78 18 chr2 72399685 72400248 -178287606 - Charlie1a DNA MER1_type -856 599 3 935 98 8 0 chr2 72400273 72400406 -178287448 + AluSx SINE Alu 1 134 -179 329 253 11 22 chr2 72400408 72400499 -178287355 + L1MC4 LINE L1 6614 6703 -1339 * 350 233 22 22 chr2 72400432 72400522 -178287332 - L1MC4 LINE L1 -1339 6703 6614 360 0 0 0 chr2 72400522 72400562 -178287292 + (TG)n Simple_repeat Simple_repeat 2 41 0 1118 134 0 6 chr2 72400585 72400749 -178287105 + AluSx SINE Alu 130 292 -18 2052 136 0 0 chr2 72400889 72401200 -178286654 - AluSx SINE Alu 0 313 3 219 255 0 0 chr2 72401513 72401564 -178286290 + L2 LINE L2 3189 3239 -74 391 279 174 12 chr2 72402261 72402357 -178285497 - MIR SINE MIR -30 232 153 2383 74 3 0 chr2 72402357 72402653 -178285201 + AluY SINE Alu 1 297 -14 391 279 174 12 chr2 72402653 72402717 -178285137 - MIR SINE MIR -109 153 46 203 309 36 64 chr2 72403179 72403289 -178284565 - L2 LINE L2 -2493 821 715 4181 182 55 13 chr2 72403492 72404535 -178283319 - L1MB8 LINE L1 -2 6176 5088 906 174 25 0 chr2 72404554 72404715 -178283139 + MER58B DNA MER1_type 177 341 0 591 206 88 0 chr2 72405296 72405432 -178282422 + MLT1L LTR MaLR 458 605 -10 186 319 99 44 chr2 72406002 72406093 -178281761 + L2 LINE L2 3175 3270 -2 221 373 133 22 chr2 72406454 72406776 -178281078 - L2 LINE L2 -23 3249 2892 184 272 86 49 chr2 72406993 72407074 -178280780 - L2 LINE L2 -689 2625 2542 236 336 25 33 chr2 72407993 72408115 -178279739 - L2 LINE L2 -3 3310 3190 1305 108 183 0 chr2 72408202 72408442 -178279412 + Tigger5 DNA MER2_type 2040 2323 0 830 204 112 35 chr2 72408468 72408728 -178279126 + MER57A LTR ERV1 124 403 0 218 264 14 28 chr2 72408735 72408807 -178279047 - L2 LINE L2 -78 3235 3165 247 360 57 34 chr2 72408945 72409120 -178278734 - L2 LINE L2 -366 2948 2770 1024 167 5 59 chr2 72409373 72409595 -178278259 + MER2 DNA MER2_type 1 210 -135 399 300 0 67 chr2 72409694 72409844 -178278010 - MIR SINE MIR -108 154 15 2082 128 10 0 chr2 72409862 72410158 -178277696 + AluSg SINE Alu 1 299 -11 686 248 50 10 chr2 72410212 72410410 -178277444 + MER3 DNA MER1_type 2 207 -2 2125 134 3 0 chr2 72410443 72410750 -178277104 + AluSg SINE Alu 3 310 0 204 309 149 21 chr2 72413134 72413228 -178274626 - L2 LINE L2 -14 3299 3194 1758 170 31 0 chr2 72413383 72413672 -178274182 + AluJb SINE Alu 1 298 -14 2415 94 0 0 chr2 72414358 72414667 -178273187 - AluSg SINE Alu -1 309 1 587 326 79 28 chr2 72414774 72415231 -178272623 + L2 LINE L2 1838 2317 -997 1623 166 11 0 chr2 72415276 72415547 -178272307 - AluJb SINE Alu -38 274 1 482 171 0 0 chr2 72415632 72415708 -178272146 - MER5A DNA MER1_type -113 76 1 292 305 171 0 chr2 72415900 72416005 -178271849 + L2 LINE L2 3146 3268 -4 341 324 129 43 chr2 72416016 72416597 -178271257 + L2 LINE L2 2440 3084 -188 718 206 116 7 chr2 72416788 72416943 -178270911 - MER5A DNA MER1_type 0 189 18 205 330 128 48 chr2 72417053 72417326 -178270528 + L2 LINE L2 3019 3313 0 43 85 0 0 chr2 72420124 72420230 -178267624 + GC_rich Low_complexity Low_complexity 1 106 0 207 227 30 15 chr2 72420663 72420729 -178267125 + GA-rich Low_complexity Low_complexity 2 68 0 270 73 0 0 chr2 72421880 72421921 -178265933 + (TG)n Simple_repeat Simple_repeat 1 41 0 186 103 0 0 chr2 72422146 72422175 -178265679 + (TC)n Simple_repeat Simple_repeat 2 30 0 207 146 0 49 chr2 72422180 72422221 -178265633 + (CCCCCT)n Simple_repeat Simple_repeat 5 43 0 255 347 113 8 chr2 72423016 72423396 -178264458 - L2 LINE L2 -643 2671 2252 2053 130 3 10 chr2 72423542 72423841 -178264013 + AluSx SINE Alu 3 299 -13 182 250 56 42 chr2 72425814 72425886 -178261968 + MIR SINE MIR 31 103 -105 663 218 61 0 chr2 72425892 72426039 -178261815 - MER3 DNA MER1_type 0 209 54 21 0 0 0 chr2 72426212 72426233 -178261621 + AT_rich Low_complexity Low_complexity 1 21 0 2251 88 11 0 chr2 72426233 72426518 -178261336 + AluSg SINE Alu 1 288 -22 360 0 0 0 chr2 72426520 72426560 -178261294 + (TA)n Simple_repeat Simple_repeat 2 41 0 22 0 0 0 chr2 72426737 72426759 -178261095 + AT_rich Low_complexity Low_complexity 1 22 0 2181 114 7 3 chr2 72426916 72427223 -178260631 + AluSc SINE Alu 1 308 -1 246 265 79 26 chr2 72428166 72428355 -178259499 - L1ME LINE L1 -214 5907 5709 2590 52 3 0 chr2 72428367 72428675 -178259179 - AluY SINE Alu -2 309 1 1592 191 3 14 chr2 72428690 72428973 -178258881 - AluJb SINE Alu -32 280 1 2030 86 0 0 chr2 72430227 72430484 -178257370 + AluY SINE Alu 38 294 -17 30 45 0 0 chr2 72431093 72431137 -178256717 + AT_rich Low_complexity Low_complexity 1 44 0 21 57 0 0 chr2 72431269 72431304 -178256550 + AT_rich Low_complexity Low_complexity 1 35 0 2327 104 0 0 chr2 72432279 72432625 -178255229 - AluSx SINE Alu 0 350 5 255 329 0 13 chr2 72433324 72433400 -178254454 - MIR SINE MIR -186 76 2 21 0 0 0 chr2 72434395 72434416 -178253438 + AT_rich Low_complexity Low_complexity 1 21 0 5584 151 52 10 chr2 72435065 72435342 -178252512 + L1PB4 LINE L1 4113 4377 -1779 192 40 0 0 chr2 72435342 72435367 -178252487 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5584 151 52 10 chr2 72435367 72437048 -178250806 + L1PB4 LINE L1 4377 6156 0 800 236 0 0 chr2 72437546 72437707 -178250147 + FAM SINE Alu 4 164 -11 2532 44 0 41 chr2 72437943 72438263 -178249591 - AluY SINE Alu -4 307 1 850 205 0 0 chr2 72438323 72438479 -178249375 + FRAM SINE Alu 1 156 -10 937 345 0 83 chr2 72438479 72438804 -178249050 - AluJb SINE Alu -4 298 1 348 273 0 36 chr2 72438851 72438961 -178248893 + MIR3 SINE MIR 98 203 -5 24 32 0 0 chr2 72439187 72439218 -178248636 + AT_rich Low_complexity Low_complexity 1 31 0 2212 83 38 7 chr2 72439244 72439534 -178248320 - AluSc SINE Alu -10 299 1 1001 149 0 7 chr2 72439578 72439732 -178248122 + FRAM SINE Alu 16 168 -8 609 52 0 31 chr2 72439900 72439997 -178247857 + (TTTC)n Simple_repeat Simple_repeat 3 96 0 201 352 0 14 chr2 72441308 72441379 -178246475 + L3b LINE CR1 1362 1431 -152 572 63 13 0 chr2 72441404 72441483 -178246371 - MADE1 DNA Mariner 0 80 1 729 189 8 0 chr2 72441721 72441848 -178246006 + FLAM_C SINE Alu 2 129 -4 1140 156 24 24 chr2 72443157 72443362 -178244492 - AluJo SINE Alu -21 291 87 1540 127 133 10 chr2 72443676 72443976 -178243878 + MER44D DNA MER2_type 1 607 -2 916 131 0 0 chr2 72444253 72444383 -178243471 + FLAM_C SINE Alu 14 143 0 240 283 0 0 chr2 72444555 72444608 -178243246 + MIR SINE MIR 100 152 -56 1610 137 118 11 chr2 72444932 72445203 -178242651 + AluSg SINE Alu 3 302 -8 192 384 47 32 chr2 72445360 72445550 -178242304 - MIR SINE MIR -51 211 19 2446 50 3 7 chr2 72445568 72445869 -178241985 + AluY SINE Alu 1 300 -11 1872 174 0 3 chr2 72446173 72446477 -178241377 - AluJb SINE Alu -9 303 1 738 209 0 8 chr2 72448582 72448716 -178239138 - AluJb SINE Alu -46 266 134 1761 157 33 10 chr2 72448716 72449021 -178238833 - AluJo SINE Alu 0 312 1 2328 68 7 3 chr2 72449058 72449354 -178238500 - AluY SINE Alu -14 297 1 351 0 0 0 chr2 72449515 72449554 -178238300 + (CA)n Simple_repeat Simple_repeat 1 78 0 351 0 0 0 chr2 72449554 72449593 -178238261 + (CA)n Simple_repeat Simple_repeat 2 40 0 2271 104 3 0 chr2 72449607 72449905 -178237949 - AluSp SINE Alu -14 299 1 12775 82 2 1 chr2 72450021 72452014 -178235840 - L1P3 LINE L1 -617 5537 3544 22 0 0 0 chr2 72452739 72452761 -178235093 + AT_rich Low_complexity Low_complexity 1 22 0 405 335 26 13 chr2 72453261 72453416 -178234438 + MIR SINE MIR 99 255 -7 2149 127 0 3 chr2 72453422 72453730 -178234124 + AluSx SINE Alu 1 307 -5 500 277 13 50 chr2 72456045 72456204 -178231650 - MER5A DNA MER1_type -1 188 36 2207 109 10 3 chr2 72456408 72456711 -178231143 + AluSx SINE Alu 6 310 -2 1424 127 44 13 chr2 72457331 72457559 -178230295 + AluJb SINE Alu 78 312 0 472 250 23 15 chr2 72457617 72457749 -178230105 - L1MD2 LINE L1 -197 6162 6030 276 77 0 0 chr2 72458190 72458229 -178229625 + (CA)n Simple_repeat Simple_repeat 2 40 0 566 299 92 14 chr2 72458644 72458851 -178229003 + MIR SINE MIR 34 256 -6 222 348 43 43 chr2 72458924 72459111 -178228743 - L3b LINE CR1 -110 1473 1287 295 154 0 0 chr2 72459130 72459182 -178228672 - MLT1I LTR MaLR -8 401 350 298 210 48 32 chr2 72459249 72459373 -178228481 + L1MC4 LINE L1 7916 8041 -1 882 293 59 19 chr2 72459382 72459703 -178228151 - MLT1I LTR MaLR -72 337 4 282 56 0 0 chr2 72459930 72459966 -178227888 + (CAGC)n Simple_repeat Simple_repeat 1 36 0 429 323 86 30 chr2 72460140 72460338 -178227516 - L2 LINE L2 -200 3072 2864 275 282 87 0 chr2 72460770 72460873 -178226981 - MIR SINE MIR -54 208 97 311 212 68 51 chr2 72460884 72461002 -178226852 + MIR SINE MIR 79 198 -64 28 29 0 0 chr2 72461165 72461200 -178226654 + AT_rich Low_complexity Low_complexity 1 35 0 1991 159 0 0 chr2 72461349 72461651 -178226203 - AluJb SINE Alu -8 304 3 1048 244 19 0 chr2 72461689 72461894 -178225960 - MIR SINE MIR -27 235 27 2218 110 7 0 chr2 72461897 72462198 -178225656 - AluSx SINE Alu -7 305 3 337 276 23 0 chr2 72463213 72463300 -178224554 - MIR3 SINE MIR -31 177 89 2351 110 0 0 chr2 72463470 72463771 -178224083 + AluSg SINE Alu 1 301 -9 542 211 97 0 chr2 72466257 72466371 -178221483 + FLAM_C SINE Alu 1 125 -8 1425 218 64 34 chr2 72467314 72467786 -178220068 + L1ME2 LINE L1 5679 6164 0 336 346 137 7 chr2 72467792 72467945 -178219909 + L1MC/D LINE L1 5485 5657 -2151 1764 147 77 7 chr2 72468144 72468417 -178219437 + AluJo SINE Alu 1 292 -20 228 135 0 0 chr2 72468417 72468454 -178219400 + (TG)n Simple_repeat Simple_repeat 2 38 0 2165 86 30 20 chr2 72468499 72468802 -178219052 - AluSg SINE Alu -4 306 1 911 141 0 7 chr2 72468803 72468938 -178218916 - AluSq/x SINE Alu -177 135 2 195 42 0 0 chr2 72469127 72469151 -178218703 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1846 174 0 31 chr2 72469157 72469479 -178218375 + AluJb SINE Alu 1 312 0 29 84 0 0 chr2 72470146 72470217 -178217637 + AT_rich Low_complexity Low_complexity 1 71 0 404 290 6 55 chr2 72470923 72471081 -178216773 - MIR SINE MIR -62 146 2 1379 165 72 40 chr2 72471169 72471515 -178216339 + MLT1A1 LTR MaLR 1 357 -8 754 224 65 9 chr2 72471972 72472186 -178215668 - L1ME LINE L1 -496 5668 5443 1841 250 166 31 chr2 72472191 72472208 -178215646 + L1M4 LINE L1 3117 3130 -3016 2253 126 0 0 chr2 72472208 72472517 -178215337 + AluSg SINE Alu 1 309 -1 1841 250 166 31 chr2 72472517 72473482 -178214372 + L1M4 LINE L1 3130 4258 -1888 2487 52 0 10 chr2 72473482 72473788 -178214066 + AluY SINE Alu 2 304 -7 1841 250 166 31 chr2 72473788 72473876 -178213978 + L1M4 LINE L1 4258 4333 -1813 297 250 11 0 chr2 72473960 72474048 -178213806 - L1ME LINE L1 -2406 5402 5314 2487 37 10 3 chr2 72474717 72475017 -178212837 - AluY SINE Alu -9 302 1 2118 121 10 3 chr2 72475668 72475974 -178211880 + AluSx SINE Alu 3 310 -2 1943 126 0 45 chr2 72475977 72476287 -178211567 + AluSx SINE Alu 1 296 -16 632 72 24 0 chr2 72476498 72476581 -178211273 - AluY SINE Alu -16 295 211 183 80 0 0 chr2 72476684 72476709 -178211145 + (A)n Simple_repeat Simple_repeat 1 25 0 316 314 83 0 chr2 72476725 72476846 -178211008 + MIR3 SINE MIR 67 197 -11 2195 114 7 0 chr2 72476860 72477157 -178210697 + AluSx SINE Alu 1 299 -13 1560 203 10 17 chr2 72477686 72477987 -178209867 - AluJo SINE Alu -13 299 1 1942 156 0 0 chr2 72478272 72478554 -178209300 + AluJo SINE Alu 1 282 -30 266 0 29 0 chr2 72478562 72478596 -178209258 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 190 218 167 13 chr2 72479891 72479969 -178207885 + L2 LINE L2 2614 2703 -611 250 219 12 49 chr2 72480106 72480188 -178207666 + L1ME4a LINE L1 333 411 -5659 327 85 0 0 chr2 72480305 72480352 -178207502 + (TATG)n Simple_repeat Simple_repeat 2 48 0 2282 98 0 0 chr2 72480407 72480703 -178207151 + AluSq SINE Alu 1 296 -17 715 280 90 46 chr2 72480759 72481607 -178206247 + L1ME4a LINE L1 370 1143 -4835 3464 225 114 27 chr2 72481674 72481854 -178206000 + L1ME4a LINE L1 3039 3202 -2878 2101 136 0 19 chr2 72481854 72482170 -178205684 + AluSx SINE Alu 1 310 -2 3464 225 114 27 chr2 72482170 72483493 -178204361 + L1ME4a LINE L1 3202 4674 -1406 2009 197 156 13 chr2 72483546 72484150 -178203704 + L1ME1 LINE L1 5468 6157 -9 315 324 146 47 chr2 72484158 72484644 -178203210 + L2 LINE L2 2734 3262 -10 228 192 77 26 chr2 72485018 72485096 -178202758 + L1ME4a LINE L1 4672 4753 -1327 35 41 0 0 chr2 72485416 72485465 -178202389 + AT_rich Low_complexity Low_complexity 1 49 0 330 295 161 57 chr2 72485481 72485779 -178202075 + L1ME4a LINE L1 5202 5530 -2212 1122 132 30 46 chr2 72486057 72486254 -178201600 - AluJo SINE Alu -32 280 87 448 303 63 17 chr2 72486531 72486706 -178201148 + MER5A DNA MER1_type 7 189 0 238 120 67 0 chr2 72486978 72487053 -178200801 + (TA)n Simple_repeat Simple_repeat 1 80 0 273 271 78 62 chr2 72487839 72487968 -178199886 + MER5B DNA MER1_type 48 178 0 884 198 51 0 chr2 72488089 72488266 -178199588 + MER5A DNA MER1_type 2 187 -2 390 345 64 13 chr2 72490791 72491026 -178196828 + L1ME4a LINE L1 5579 5825 -230 525 202 0 10 chr2 72491043 72491142 -178196712 + L2 LINE L2 3208 3305 -8 2029 128 7 3 chr2 72491559 72491856 -178195998 + AluSx SINE Alu 1 298 -14 180 0 0 0 chr2 72491861 72491881 -178195973 + (CAAAAA)n Simple_repeat Simple_repeat 6 25 0 622 230 0 14 chr2 72491891 72492030 -178195824 + FLAM_A SINE Alu 1 137 -5 363 252 157 0 chr2 72492030 72492145 -178195709 + MIR SINE MIR 60 192 -70 444 294 101 35 chr2 72492319 72492547 -178195307 + MIR SINE MIR 20 262 0 605 175 194 79 chr2 72492576 72492828 -178195026 - L1PA16 LINE L1 -12 6154 5874 256 28 111 0 chr2 72493018 72493054 -178194800 - AluSc SINE Alu -95 204 165 * 1829 207 0 20 chr2 72493052 72493410 -178194444 + MLT1A1 LTR MaLR 15 365 0 1878 152 0 21 chr2 72493841 72494161 -178193693 - AluSx SINE Alu 0 314 1 969 318 29 59 chr2 72494673 72494867 -178192987 + L2 LINE L2 2216 2414 -900 2109 128 3 13 chr2 72494867 72495173 -178192681 - AluSx SINE Alu -5 307 5 969 318 29 59 chr2 72495173 72495456 -178192398 + L2 LINE L2 2414 2679 -635 419 308 60 64 chr2 72495459 72495693 -178192161 + L2 LINE L2 3078 3310 -3 23 54 0 0 chr2 72495952 72495989 -178191865 + AT_rich Low_complexity Low_complexity 1 37 0 2632 52 0 0 chr2 72496428 72496737 -178191117 - AluY SINE Alu -2 309 1 314 138 17 0 chr2 72496881 72496939 -178190915 + CT-rich Low_complexity Low_complexity 2 60 0 229 200 15 92 chr2 72497457 72497522 -178190332 - MLT1K LTR MaLR 0 588 529 228 343 14 0 chr2 72497741 72497811 -178190043 - MIR SINE MIR -183 79 9 1329 230 119 48 chr2 72498855 72499359 -178188495 - MLT1F LTR MaLR -2 540 1 672 173 41 132 chr2 72499525 72499608 -178188246 + MER58 DNA MER1_type 1 90 -2330 1817 132 7 28 chr2 72499608 72499932 -178187922 - AluSx SINE Alu 0 320 3 672 173 41 132 chr2 72499932 72500067 -178187787 + MER58 DNA MER1_type 90 200 -2220 700 128 51 8 chr2 72501158 72501275 -178186579 - FLAM_A SINE Alu -3 139 18 2208 124 0 0 chr2 72502039 72502345 -178185509 - AluSg SINE Alu -4 306 1 306 0 0 0 chr2 72502802 72502836 -178185018 + (CAA)n Simple_repeat Simple_repeat 2 35 0 2023 102 11 7 chr2 72503018 72503348 -178184506 + AluSp SINE Alu 1 331 0 24 0 0 0 chr2 72503480 72503504 -178184350 + AT_rich Low_complexity Low_complexity 1 24 0 278 321 85 14 chr2 72503547 72503759 -178184095 + L1MEd LINE L1 614 840 -5279 21 0 0 0 chr2 72503827 72503848 -178184006 + AT_rich Low_complexity Low_complexity 1 21 0 328 307 138 0 chr2 72503899 72504088 -178183766 + L1ME3A LINE L1 5732 5946 -224 231 315 67 7 chr2 72504180 72504351 -178183503 + L1ME3A LINE L1 5971 6150 -20 262 295 19 0 chr2 72504507 72504612 -178183242 + L1M4 LINE L1 5128 5234 -912 23 78 0 0 chr2 72504710 72504761 -178183093 + AT_rich Low_complexity Low_complexity 1 51 0 2168 92 0 10 chr2 72504927 72505251 -178182603 + AluSq SINE Alu 1 313 0 2055 127 11 0 chr2 72505712 72505871 -178181983 - AluSx SINE Alu -23 289 124 189 0 0 0 chr2 72505871 72505892 -178181962 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2055 127 11 0 chr2 72505892 72506016 -178181838 - AluSx SINE Alu -188 124 3 1821 244 123 40 chr2 72506086 72507180 -178180674 - L1ME3A LINE L1 0 6170 4981 3240 232 42 10 chr2 72507205 72507997 -178179857 - L1ME1 LINE L1 -10 6156 5340 1968 186 110 32 chr2 72507998 72508461 -178179393 - MLT1D LTR MaLR -2 503 5 1312 212 28 7 chr2 72508462 72508848 -178179006 - L1ME1 LINE L1 -812 5350 4957 1742 155 3 18 chr2 72508911 72509195 -178178659 + AluJb SINE Alu 1 280 -32 387 0 0 0 chr2 72509195 72509238 -178178616 + (CAAAA)n Simple_repeat Simple_repeat 5 47 0 3189 202 87 40 chr2 72509334 72510116 -178177738 + MER21B LTR ERV1 43 861 -2 457 289 67 9 chr2 72510723 72510862 -178176992 + MIR SINE MIR 5 151 -57 300 228 110 35 chr2 72511568 72511713 -178176141 - L1MC5 LINE L1 -101 7860 7705 219 69 0 0 chr2 72511722 72511751 -178176103 + (TG)n Simple_repeat Simple_repeat 2 30 0 707 274 14 0 chr2 72511880 72512099 -178175755 + L1MEc LINE L1 80 301 -6095 435 170 170 0 chr2 72512240 72512340 -178175514 - MER47A DNA MER2_type -237 129 13 1625 164 35 3 chr2 72513902 72514188 -178173666 + AluJo SINE Alu 1 295 -17 247 273 117 0 chr2 72514344 72514421 -178173433 + L2 LINE L2 3186 3271 -1 587 322 109 35 chr2 72514527 72514987 -178172867 - L2 LINE L2 -3 3310 2817 264 59 0 0 chr2 72515262 72515296 -178172558 + (A)n Simple_repeat Simple_repeat 1 34 0 201 159 0 0 chr2 72516882 72516926 -178170928 + (TA)n Simple_repeat Simple_repeat 1 44 0 2192 96 0 13 chr2 72517374 72517677 -178170177 + AluY SINE Alu 1 299 -12 526 226 123 20 chr2 72517827 72517973 -178169881 - MER58C DNA MER1_type -53 162 2 439 167 49 20 chr2 72518205 72518307 -178169547 - L1ME3A LINE L1 -9 6161 6057 419 187 160 0 chr2 72518325 72518481 -178169373 - L1ME3A LINE L1 -165 6001 5829 867 103 8 0 chr2 72518800 72518917 -178168937 + AluSq/x SINE Alu 1 118 -194 265 89 0 89 chr2 72518955 72519011 -178168843 + Alu SINE Alu 246 296 -4 1450 271 169 41 chr2 72519018 72519849 -178168005 - HAL1 LINE L1 -359 2148 1212 390 294 196 45 chr2 72519881 72520279 -178167575 - HAL1 LINE L1 -1466 1041 584 1181 233 78 40 chr2 72520344 72520795 -178167059 - HAL1 LINE L1 -2030 477 10 754 174 15 0 chr2 72521071 72521203 -178166651 + AluJo SINE Alu 1 134 -178 2225 121 0 0 chr2 72521204 72521502 -178166352 + AluSc SINE Alu 1 298 -11 325 118 67 0 chr2 72521673 72521792 -178166062 + (TA)n Simple_repeat Simple_repeat 1 127 0 295 305 184 14 chr2 72523063 72523204 -178164650 + MIR SINE MIR 1 165 -97 2157 124 0 7 chr2 72524151 72524442 -178163412 + AluSx SINE Alu 1 289 -23 21 0 0 0 chr2 72525030 72525051 -178162803 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 72525813 72525846 -178162008 + AT_rich Low_complexity Low_complexity 1 33 0 2123 121 0 10 chr2 72525851 72526157 -178161697 + AluSx SINE Alu 1 303 -9 31 0 0 0 chr2 72526321 72526352 -178161502 + AT_rich Low_complexity Low_complexity 1 31 0 243 0 0 0 chr2 72526521 72526548 -178161306 + (A)n Simple_repeat Simple_repeat 1 27 0 2238 92 0 7 chr2 72526548 72526852 -178161002 + AluSq SINE Alu 1 302 -11 3004 150 67 11 chr2 72527408 72527973 -178159881 - MER7C DNA MER2_type 0 602 6 624 248 68 22 chr2 72531231 72531453 -178156401 + L1MD3 LINE L1 7726 7957 -38 * 2671 209 57 48 chr2 72531447 72532214 -178155640 - L1MC4a LINE L1 -252 7556 6783 284 198 0 86 chr2 72533047 72533128 -178154726 - L2 LINE L2 0 3313 3240 912 295 50 8 chr2 72533704 72534063 -178153791 - L1MC4a LINE L1 -2117 5691 5318 21 0 0 0 chr2 72534256 72534277 -178153577 + AT_rich Low_complexity Low_complexity 1 21 0 260 143 0 0 chr2 72534531 72534573 -178153281 - U3 snRNA snRNA -175 42 1 2295 102 3 0 chr2 72534763 72535068 -178152786 - AluSx SINE Alu -4 308 3 735 275 30 30 chr2 72535400 72535636 -178152218 + MIR SINE MIR 27 262 0 327 167 15 15 chr2 72535865 72535931 -178151923 - L3 LINE CR1 -1 1576 1511 381 141 6 0 chr2 72537160 72537237 -178150617 - AluS SINE Alu -248 60 1 240 200 0 0 chr2 72537237 72537277 -178150577 + MER58 DNA MER1_type 2380 2419 -1 27 0 0 0 chr2 72537277 72537304 -178150550 + AT_rich Low_complexity Low_complexity 1 27 0 227 174 163 23 chr2 72537306 72537392 -178150462 - MER21B LTR ERV1 -350 513 416 285 315 11 11 chr2 72537686 72537778 -178150076 - L1MC/D LINE L1 -2202 5606 5515 17091 111 12 1 chr2 72537870 72541189 -178146665 + L1PA8A LINE L1 2770 6118 -13 266 206 66 37 chr2 72541204 72541340 -178146514 - L1MC/D LINE L1 -773 5397 5258 731 248 0 99 chr2 72541417 72541496 -178146358 - MIR SINE MIR 0 262 177 1939 138 20 13 chr2 72541496 72541794 -178146060 - AluSx SINE Alu -12 300 1 731 248 0 99 chr2 72541794 72541956 -178145898 - MIR SINE MIR -85 177 45 522 243 81 65 chr2 72542007 72542192 -178145662 - MIR SINE MIR -70 192 5 631 307 111 50 chr2 72542793 72542996 -178144858 + L1ME3A LINE L1 5366 5555 -615 1960 130 0 27 chr2 72542996 72543288 -178144566 + AluSq SINE Alu 1 284 -29 631 307 111 50 chr2 72543288 72543609 -178144245 + L1ME3A LINE L1 5555 5922 -248 582 274 129 74 chr2 72543588 72544127 -178143727 - HAL1 LINE L1 -1475 1032 524 * 5621 189 91 34 chr2 72544127 72545447 -178142407 + Charlie1a DNA MER1_type 2 1246 -1515 2083 104 66 0 chr2 72545447 72545734 -178142120 + AluSx SINE Alu 1 306 -6 5621 189 91 34 chr2 72545734 72545751 -178142103 + Charlie1a DNA MER1_type 1246 1261 -1500 2636 43 0 0 chr2 72545751 72546054 -178141800 + AluY SINE Alu 9 311 0 5621 189 91 34 chr2 72546054 72546091 -178141763 + Charlie1a DNA MER1_type 1261 1455 0 582 274 129 74 chr2 72546091 72546200 -178141654 - HAL1 LINE L1 -1983 524 348 1524 198 20 67 chr2 72546633 72546796 -178141058 - MER58B DNA MER1_type -2079 341 172 1977 143 0 14 chr2 72546796 72547102 -178140752 - AluSx SINE Alu 0 302 1 1524 198 20 67 chr2 72547102 72547295 -178140559 - MER58B DNA MER1_type -2248 172 1 1439 163 41 21 chr2 72548675 72548971 -178138883 - MER61B LTR ERV1 -28 396 1 270 305 136 8 chr2 72549084 72549202 -178138652 - MER91A DNA MER1_type -42 154 22 2324 115 0 0 chr2 72549859 72550171 -178137683 - AluSx SINE Alu 0 312 1 2177 171 45 37 chr2 72550173 72550339 -178137515 - L1MC3 LINE L1 0 7808 7645 1811 97 4 0 chr2 72550339 72550576 -178137278 - AluSp SINE Alu -14 299 62 2177 171 45 37 chr2 72550576 72550954 -178136900 - L1MC3 LINE L1 -163 7645 7175 272 257 43 0 chr2 72550954 72551024 -178136830 - MLT1F1 LTR MaLR -456 111 39 1864 155 76 63 chr2 72551026 72551484 -178136370 - L1MC3 LINE L1 -686 7099 6636 2151 230 55 28 chr2 72551687 72552192 -178135662 + LTR40a LTR ERVL 1 519 0 1463 193 45 84 chr2 72552272 72552698 -178135156 - LTR37A LTR ERV1 0 426 18 2237 100 3 0 chr2 72552830 72553119 -178134735 + AluSx SINE Alu 1 290 -22 213 277 0 31 chr2 72553407 72553472 -178134382 + L2 LINE L2 3206 3268 -4 336 246 27 18 chr2 72554329 72554439 -178133415 + LTR67 LTR ERVL 440 550 -7 663 264 38 1 chr2 72554545 72554732 -178133122 - MIR SINE MIR 0 262 71 2262 166 114 7 chr2 72554772 72555194 -178132660 - MLT1C LTR MaLR 0 467 1 291 246 39 69 chr2 72555473 72555603 -178132251 + MIR SINE MIR 60 185 -77 2252 106 0 3 chr2 72555605 72555908 -178131946 - AluSx SINE Alu -10 302 1 372 216 138 0 chr2 72557482 72557598 -178130256 - MIR3 SINE MIR -21 187 56 21 36 0 0 chr2 72558137 72558165 -178129689 + AT_rich Low_complexity Low_complexity 1 28 0 1036 172 0 50 chr2 72558359 72558557 -178129297 - L1PA13 LINE L1 0 6163 5976 468 264 124 17 chr2 72559379 72559557 -178128297 - MIR SINE MIR -20 242 46 820 239 29 42 chr2 72560226 72560464 -178127390 - MIR SINE MIR -22 240 6 773 65 0 0 chr2 72560585 72560678 -178127176 - AluSp/q SINE Alu -12 301 209 864 296 30 9 chr2 72560710 72560943 -178126911 - MIR SINE MIR -12 250 13 269 315 0 87 chr2 72561506 72561573 -178126281 + L2 LINE L2 3134 3183 -89 1974 154 3 16 chr2 72561573 72561885 -178125969 - AluSx SINE Alu -2 310 3 269 315 0 87 chr2 72561885 72561966 -178125888 + L2 LINE L2 3183 3269 -3 308 299 255 16 chr2 72562196 72562580 -178125274 - L3 LINE CR1 -1 1576 1044 715 284 89 0 chr2 72562589 72562825 -178125029 - MIR SINE MIR -3 259 3 260 267 30 50 chr2 72562836 72562937 -178124917 - L3 LINE CR1 -540 1037 939 300 244 100 49 chr2 72562937 72563195 -178124659 - L1M2 LINE L1 -694 5457 5255 2171 128 0 7 chr2 72563280 72563578 -178124276 - AluSx SINE Alu -16 296 1 291 93 0 0 chr2 72563785 72563828 -178124026 + (CA)n Simple_repeat Simple_repeat 2 44 0 278 281 41 128 chr2 72563974 72564170 -178123684 + MIR3 SINE MIR 20 198 -10 887 29 0 0 chr2 72564505 72564608 -178123246 - L1PA4 LINE L1 -41 6114 6012 637 43 0 75 chr2 72564608 72564700 -178123154 + L1PA4 LINE L1 6069 6155 0 197 300 33 0 chr2 72564856 72564916 -178122938 - MIR3 SINE MIR -8 200 139 25 0 0 0 chr2 72564955 72564980 -178122874 + AT_rich Low_complexity Low_complexity 1 25 0 793 273 42 71 chr2 72565071 72565481 -178122373 - L1MC4 LINE L1 -3 8039 7642 2420 241 60 52 chr2 72565631 72566529 -178121325 - L1ME3 LINE L1 0 6162 5258 336 275 239 0 chr2 72567211 72567349 -178120505 - MER117 DNA MER1_type -26 171 1 26 0 0 0 chr2 72567704 72567730 -178120124 + AT_rich Low_complexity Low_complexity 1 26 0 7141 126 8 4 chr2 72567730 72568993 -178118861 - L1MA2 LINE L1 0 6304 5037 249 250 37 19 chr2 72569132 72569240 -178118614 + (TA)n Simple_repeat Simple_repeat 1 110 0 258 331 40 51 chr2 72569240 72569415 -178118439 - MIR SINE MIR -58 204 32 249 339 63 0 chr2 72569824 72569951 -178117903 - MIR SINE MIR -65 197 63 1997 135 0 28 chr2 72569951 72570270 -178117584 + AluSg SINE Alu 1 310 0 196 346 75 28 chr2 72570335 72570442 -178117412 - MER5A DNA MER1_type -76 113 2 260 299 24 90 chr2 72571096 72571263 -178116591 - L2 LINE L2 -208 3064 2909 240 35 0 0 chr2 72572237 72572266 -178115588 + (GA)n Simple_repeat Simple_repeat 2 30 0 192 97 0 0 chr2 72573602 72573633 -178114221 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 878 245 116 9 chr2 72574168 72574384 -178113470 + MIR SINE MIR 3 241 -21 453 122 0 0 chr2 72575246 72575320 -178112534 + (TTCTCC)n Simple_repeat Simple_repeat 5 78 0 1534 136 90 47 chr2 72575341 72575620 -178112234 - AluSq SINE Alu -3 310 20 253 250 0 31 chr2 72575894 72575958 -178111896 + MIR SINE MIR 85 146 -62 843 136 34 20 chr2 72576223 72576370 -178111484 - L1MA6 LINE L1 0 6300 6152 195 329 141 26 chr2 72576554 72576788 -178111066 + L2 LINE L2 2699 2959 -355 214 294 0 0 chr2 72577028 72577079 -178110775 + MIR SINE MIR 206 256 -6 190 64 0 85 chr2 72577161 72577208 -178110646 + (TTTTTA)n Simple_repeat Simple_repeat 6 48 0 232 51 0 0 chr2 72577208 72577247 -178110607 - L1PA2 LINE L1 0 6155 6117 728 171 26 0 chr2 72577248 72577365 -178110489 - FLAM_A SINE Alu -12 121 2 1971 105 0 0 chr2 72578114 72578371 -178109483 - AluSx SINE Alu -17 295 39 477 177 314 0 chr2 72581351 72581475 -178106379 + MER5B DNA MER1_type 16 178 0 185 327 19 0 chr2 72581702 72581754 -178106100 + MER5B DNA MER1_type 1 53 -125 330 237 134 0 chr2 72583060 72583157 -178104697 - L2 LINE L2 -13 3259 3150 403 226 8 16 chr2 72583206 72583330 -178104524 + CT-rich Low_complexity Low_complexity 1 123 0 1656 141 145 0 chr2 72585393 72585648 -178102206 + AluSx SINE Alu 1 292 -10 268 191 22 0 chr2 72586271 72586360 -178101494 + (TA)n Simple_repeat Simple_repeat 1 91 0 333 311 28 0 chr2 72587144 72587250 -178100604 + MIR3 SINE MIR 75 183 -25 990 89 8 0 chr2 72588608 72588732 -178099122 + AluSq/x SINE Alu 1 125 -187 3541 84 0 8 chr2 72588839 72589314 -178098540 - L1PA7 LINE L1 -5 6149 5679 741 196 150 0 chr2 72789317 72789490 -177898364 + L1MC4 LINE L1 7477 7675 -367 816 161 61 28 chr2 72790284 72790464 -177897390 - MER53 DNA DNA -1 188 3 210 239 0 0 chr2 72790703 72790749 -177897105 - MIR SINE MIR -109 153 108 300 341 62 26 chr2 72790987 72791213 -177896641 - MIR SINE MIR -12 250 17 295 30 0 0 chr2 72791300 72791333 -177896521 - U2 snRNA snRNA -155 33 1 1704 217 108 117 chr2 72791343 72791826 -177896028 - L1MC4a LINE L1 -1608 6200 5727 1964 159 6 16 chr2 72791826 72792141 -177895713 - AluJb SINE Alu 0 312 1 1704 217 108 117 chr2 72792141 72792583 -177895271 - L1MC4a LINE L1 -2081 5727 5283 2455 71 3 0 chr2 72793315 72793612 -177894242 + AluSx SINE Alu 1 298 -14 281 260 42 73 chr2 72793616 72793712 -177894142 - L2 LINE L2 -32 3281 3189 10523 222 129 31 chr2 72796069 72800356 -177887498 + L1PA16 LINE L1 1028 5730 -436 1883 128 0 0 chr2 72800462 72800719 -177887135 - AluSq SINE Alu -56 257 1 4138 198 76 30 chr2 72800719 72802134 -177885720 - L1PBa LINE L1 -4761 2102 434 2392 79 0 13 chr2 72802134 72802449 -177885405 - AluY SINE Alu 0 311 1 4138 198 76 30 chr2 72802449 72802899 -177884955 - L1PBa LINE L1 -6429 434 6 1696 154 219 0 chr2 72803289 72803640 -177884214 - MSTA LTR MaLR 0 428 1 658 177 24 0 chr2 72803803 72803927 -177883927 + L1MC4 LINE L1 6460 6586 -1456 786 178 0 15 chr2 72803929 72804064 -177883790 + FLAM_C SINE Alu 1 133 0 1162 186 14 0 chr2 72804272 72804482 -177883372 + L1PA16 LINE L1 5937 6149 -17 297 322 62 40 chr2 72804866 72805093 -177882761 - MLT1K LTR MaLR 0 588 357 24 0 0 0 chr2 72808067 72808091 -177879763 + AT_rich Low_complexity Low_complexity 1 24 0 462 256 50 31 chr2 72808434 72808594 -177879260 + L1ME LINE L1 2 164 -5906 1050 207 18 31 chr2 72808763 72808985 -177878869 + MER20 DNA MER1_type 1 219 0 358 270 87 100 chr2 72809007 72809403 -177878451 + MLT1L LTR MaLR 136 476 -35 600 218 61 8 chr2 72810288 72810458 -177877396 + L1ME3 LINE L1 5978 6163 -3 21 0 0 0 chr2 72810463 72810484 -177877370 + AT_rich Low_complexity Low_complexity 1 21 0 1906 138 22 98 chr2 72811578 72811984 -177875870 + THE1C LTR MaLR 1 375 0 7381 51 5 1 chr2 72812497 72814042 -177873812 - L1PA6 LINE L1 -164 5990 4443 1312 143 9 31 chr2 72815478 72815701 -177872153 + AluJo SINE Alu 87 304 -8 310 257 14 0 chr2 72819013 72819087 -177868767 + MIR SINE MIR 118 192 -70 278 282 39 36 chr2 72819721 72819898 -177867956 - MIR SINE MIR -66 142 16 216 323 32 32 chr2 72821003 72821096 -177866758 - L2 LINE L2 -195 3077 2985 1986 147 0 22 chr2 72821370 72821689 -177866165 - AluSx SINE Alu 0 312 1 1267 217 96 13 chr2 72822713 72823027 -177864827 - MER58B DNA MER1_type 0 341 2 180 77 0 0 chr2 72824672 72824698 -177863156 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 1091 226 0 0 chr2 72824924 72825123 -177862731 + MER3 DNA MER1_type 10 208 -1 269 302 62 62 chr2 72824962 72825141 -177862713 - MER3 DNA MER1_type 0 209 31 * 1378 64 6 0 chr2 72826091 72826264 -177861590 - AluSq SINE Alu -5 308 135 22 0 0 0 chr2 72827495 72827517 -177860337 + AT_rich Low_complexity Low_complexity 1 22 0 523 253 75 67 chr2 72827530 72827906 -177859948 - L1ME4a LINE L1 -10 6111 5733 241 268 43 58 chr2 72828728 72828866 -177858988 - MIR SINE MIR -46 216 81 195 42 0 0 chr2 72828953 72828977 -177858877 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2086 135 0 0 chr2 72828987 72829275 -177858579 - AluSx SINE Alu -24 288 1 305 244 191 17 chr2 72829306 72829421 -177858433 + MER117 DNA MER1_type 54 188 -9 21 0 0 0 chr2 72830550 72830571 -177857283 + AT_rich Low_complexity Low_complexity 1 21 0 15295 185 29 10 chr2 72830687 72830797 -177857057 + L1PB1 LINE L1 1992 2098 -4769 2214 131 0 0 chr2 72830797 72831109 -177856745 + AluSx SINE Alu 1 312 0 15295 185 29 10 chr2 72831109 72831770 -177856084 + L1PB1 LINE L1 2098 2745 -4122 2127 114 0 17 chr2 72831770 72832090 -177855764 + AluSx SINE Alu 1 315 0 15295 185 29 10 chr2 72832090 72835102 -177852752 + L1PB1 LINE L1 2745 5698 -1169 225 0 0 0 chr2 72835102 72835127 -177852727 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 15295 185 29 10 chr2 72835127 72835741 -177852113 + L1PB1 LINE L1 5698 6516 -351 288 0 0 0 chr2 72835741 72835773 -177852081 + (TA)n Simple_repeat Simple_repeat 2 33 0 15295 185 29 10 chr2 72835773 72836129 -177851725 + L1PB1 LINE L1 6516 6864 -3 228 225 79 22 chr2 72837357 72837446 -177850408 + MIR SINE MIR 45 138 -70 273 322 68 27 chr2 72837753 72837944 -177849910 + MIR3 SINE MIR 3 207 -1 302 341 65 24 chr2 72838292 72838462 -177849392 + L1MC4a LINE L1 5709 5885 -1923 1074 176 13 29 chr2 72838586 72838825 -177849029 - L1MB8 LINE L1 -1 6177 5943 281 200 0 0 chr2 72839659 72839714 -177848140 + MER116 DNA Mariner 1 55 -25 347 289 53 0 chr2 72839808 72839922 -177847932 - MIR SINE MIR -73 189 70 41 48 0 0 chr2 72841650 72841712 -177846142 + AT_rich Low_complexity Low_complexity 1 62 0 214 221 59 0 chr2 72842336 72842404 -177845450 + (TA)n Simple_repeat Simple_repeat 2 73 0 195 300 0 0 chr2 72842442 72842532 -177845322 + GA-rich Low_complexity Low_complexity 4 93 0 26 30 0 0 chr2 72842827 72842860 -177844994 + AT_rich Low_complexity Low_complexity 1 33 0 196 276 0 17 chr2 72843428 72843486 -177844368 - MIR SINE MIR -106 156 100 27 29 0 0 chr2 72844828 72844862 -177842992 + AT_rich Low_complexity Low_complexity 1 34 0 448 281 0 0 chr2 72844915 72845029 -177842825 + MIR SINE MIR 28 141 -121 820 156 12 38 chr2 72845158 72845318 -177842536 - AluJb SINE Alu 0 312 157 225 65 0 0 chr2 72845331 72845362 -177842492 + (TG)n Simple_repeat Simple_repeat 2 32 0 193 329 0 59 chr2 72845430 72845515 -177842339 + L2 LINE L2 1381 1460 -1854 471 237 53 40 chr2 72845712 72845864 -177841990 + MIR SINE MIR 109 262 0 214 225 11 112 chr2 72845862 72845951 -177841903 + L2 LINE L2 3222 3301 -12 * 291 345 86 0 chr2 72846762 72846878 -177840976 - L2 LINE L2 -19 3253 3128 292 286 111 8 chr2 72848668 72848794 -177839060 + MIR SINE MIR 38 176 -86 1172 284 95 28 chr2 72849501 72850229 -177837625 - L2 LINE L2 -3 3310 2539 2101 112 3 7 chr2 72850568 72850874 -177836980 + AluSx SINE Alu 1 305 0 2416 65 0 19 chr2 72851520 72851827 -177836027 + AluY SINE Alu 1 301 -10 330 274 19 19 chr2 72852525 72852631 -177835223 - MIR3 SINE MIR -20 188 83 261 343 0 19 chr2 72853680 72853788 -177834066 + GA-rich Low_complexity Low_complexity 4 109 0 195 293 0 0 chr2 72853806 72853847 -177834007 - MIR SINE MIR -117 91 51 208 326 16 49 chr2 72854336 72854487 -177833367 - MIR SINE MIR -85 177 34 315 317 24 106 chr2 72855032 72855240 -177832614 + L2 LINE L2 2944 3134 -138 1585 284 103 20 chr2 72855271 72856175 -177831679 + L2 LINE L2 2336 3313 0 342 98 0 0 chr2 72856666 72856717 -177831137 + (GA)n Simple_repeat Simple_repeat 1 51 0 2009 143 3 13 chr2 72857095 72857410 -177830444 + AluSx SINE Alu 1 312 0 572 270 179 5 chr2 72857542 72857738 -177830116 - MIR SINE MIR -31 231 2 319 224 13 13 chr2 72858083 72858159 -177829695 + MER116 DNA Mariner 4 79 -1 228 227 0 76 chr2 72858248 72858314 -177829540 + L2 LINE L2 3207 3267 -5 592 274 58 5 chr2 72859083 72859273 -177828581 - MIR SINE MIR -48 214 15 2132 123 0 10 chr2 72859450 72859752 -177828102 - AluY SINE Alu -12 299 1 332 247 61 27 chr2 72859761 72859901 -177827953 - MIR SINE MIR -65 143 56 328 246 0 15 chr2 72860144 72860274 -177827580 + GA-rich Low_complexity Low_complexity 3 130 0 22 0 0 0 chr2 72860326 72860348 -177827506 + AT_rich Low_complexity Low_complexity 1 22 0 659 318 5 14 chr2 72860629 72860852 -177827002 - MIR SINE MIR -12 250 30 1162 248 77 3 chr2 72861344 72861654 -177826200 + L1MC4 LINE L1 7526 7858 -184 * 5105 232 40 31 chr2 72861652 72863538 -177824316 + L1MA4 LINE L1 16 2599 -4966 14814 160 15 43 chr2 72863546 72867687 -177820167 + L1MA4 LINE L1 3703 7718 -1 1991 124 50 0 chr2 72867927 72868209 -177819645 - AluSx SINE Alu -16 296 1 183 80 0 0 chr2 72868536 72868561 -177819293 + (TG)n Simple_repeat Simple_repeat 1 25 0 61 0 0 0 chr2 72868646 72868707 -177819147 + AT_rich Low_complexity Low_complexity 1 61 0 188 263 0 0 chr2 72869073 72869111 -177818743 + MIR SINE MIR 78 115 -147 2117 112 0 7 chr2 72871003 72871322 -177816532 + AluSx SINE Alu 1 317 0 278 211 0 0 chr2 72871678 72871754 -177816100 + L1ME LINE L1 4628 4703 -1443 849 159 0 36 chr2 72871793 72871931 -177815923 + FLAM_C SINE Alu 1 133 0 351 219 41 0 chr2 72871945 72872018 -177815836 + MLT1G1 LTR MaLR 1 76 -519 242 310 119 30 chr2 72872259 72872562 -177815292 + L1ME LINE L1 5384 5713 -408 558 226 28 0 chr2 72873688 72873794 -177814060 - MER81 DNA DNA 0 114 6 3251 276 125 38 chr2 72874089 72874841 -177813013 - L2 LINE L2 -2 3311 2626 2274 125 64 9 chr2 72874841 72875186 -177812668 - THE1B LTR MaLR 0 364 1 3251 276 125 38 chr2 72875186 72876224 -177811630 - L2 LINE L2 -687 2626 1386 280 233 87 19 chr2 72876227 72876330 -177811524 - LTR33A LTR ERVL -2 521 412 258 263 79 0 chr2 72876473 72876549 -177811305 - LTR33A LTR ERVL -362 161 80 838 254 158 35 chr2 72876649 72876875 -177810979 - L2 LINE L2 -1929 1385 1188 2048 72 0 8 chr2 72876875 72877138 -177810716 + AluY SINE Alu 44 304 -7 838 254 158 35 chr2 72877138 72877277 -177810577 - L2 LINE L2 -2126 1188 975 366 376 13 20 chr2 72877280 72877429 -177810425 + L2 LINE L2 3123 3270 -2 391 313 16 16 chr2 72877455 72877583 -177810271 + L2 LINE L2 3145 3272 0 262 353 52 29 chr2 72878339 72878475 -177809379 + L2 LINE L2 3134 3272 0 3243 175 25 12 chr2 72878583 72879274 -177808580 + L1MB5 LINE L1 5408 6174 0 2293 220 66 6 chr2 72879281 72879781 -177808073 - MLT1F LTR MaLR -11 531 2 2070 125 7 3 chr2 72880780 72881077 -177806777 + AluSx SINE Alu 1 298 -14 180 0 0 0 chr2 72881217 72881237 -177806617 + (T)n Simple_repeat Simple_repeat 1 20 0 831 304 58 11 chr2 72881331 72881890 -177805964 - L1 LINE L1 -1088 5058 4465 414 280 55 91 chr2 72882107 72882300 -177805554 + L1ME3A LINE L1 5499 5697 -473 2024 97 4 0 chr2 72882300 72882558 -177805296 - AluSg SINE Alu -51 259 1 414 280 55 91 chr2 72882558 72882851 -177805003 + L1ME3A LINE L1 5697 5965 -205 3378 84 18 14 chr2 72884753 72885195 -177802659 - MLT2A1 LTR ERVL 0 444 1 398 314 149 10 chr2 72885444 72885638 -177802216 + MIR SINE MIR 36 256 -6 222 174 0 0 chr2 72886187 72886233 -177801621 + GA-rich Low_complexity Low_complexity 4 49 0 243 0 0 0 chr2 72887428 72887455 -177800399 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 308 289 70 23 chr2 72887677 72887805 -177800049 + MIR SINE MIR 78 211 -51 222 379 16 16 chr2 72888491 72888615 -177799239 + MIR SINE MIR 91 214 -48 579 155 15 167 chr2 72888721 72888939 -177798915 - L1MA10 LINE L1 0 6334 5988 189 216 39 0 chr2 72889538 72889589 -177798265 - L2 LINE L2 0 3313 3261 22 94 0 0 chr2 72889853 72889917 -177797937 + AT_rich Low_complexity Low_complexity 1 64 0 235 289 67 33 chr2 72890191 72890281 -177797573 - L2 LINE L2 -5 3267 3175 1273 211 4 18 chr2 72890397 72890624 -177797230 - MER58A DNA MER1_type 0 224 1 227 276 0 0 chr2 72890790 72890848 -177797006 + MIR3 SINE MIR 139 196 -12 23 33 0 0 chr2 72893292 72893322 -177794532 + AT_rich Low_complexity Low_complexity 1 30 0 452 286 104 10 chr2 72894384 72894576 -177793278 + MER63A DNA MER1_type 1 210 0 21 36 0 0 chr2 72896624 72896652 -177791202 + AT_rich Low_complexity Low_complexity 1 28 0 310 266 40 52 chr2 72898145 72898318 -177789536 - L1ME LINE L1 -473 5648 5478 2400 174 33 17 chr2 72898330 72898790 -177789064 + MLT1C LTR MaLR 1 467 0 26 0 0 0 chr2 72898848 72898874 -177788980 + AT_rich Low_complexity Low_complexity 1 26 0 369 299 108 24 chr2 72898885 72899173 -177788681 - L1ME LINE L1 -748 5398 5087 438 164 45 4 chr2 72899535 72899636 -177788218 - MLT1G1 LTR MaLR -7 588 437 315 0 0 0 chr2 72899798 72899833 -177788021 + (GA)n Simple_repeat Simple_repeat 2 36 0 531 331 6 0 chr2 72899840 72900009 -177787845 - MLT1F1 LTR MaLR -397 170 1 415 313 72 6 chr2 72901669 72901835 -177786019 - MER102b DNA MER1_type -28 313 137 276 266 32 21 chr2 72902305 72902399 -177785455 - MER5B DNA MER1_type 0 178 84 2950 189 45 39 chr2 72902419 72902739 -177785115 - Charlie1 DNA MER1_type 0 2761 2444 2273 111 0 3 chr2 72902739 72903045 -177784809 + AluSg SINE Alu 1 305 -5 2950 189 45 39 chr2 72903045 72903438 -177784416 - Charlie1 DNA MER1_type -317 2444 2044 620 204 92 14 chr2 72903409 72903551 -177784303 - Charlie1 DNA MER1_type -2555 206 54 * 318 309 18 9 chr2 72903620 72903730 -177784124 + MIR3 SINE MIR 45 155 -53 257 355 95 32 chr2 72903753 72903942 -177783912 - MER20 DNA MER1_type -18 201 1 324 0 0 0 chr2 72904050 72904086 -177783768 + (TG)n Simple_repeat Simple_repeat 2 37 0 752 299 20 4 chr2 72904416 72904660 -177783194 + MIR SINE MIR 4 251 -11 250 284 135 28 chr2 72905703 72905844 -177782010 - MIR3 SINE MIR -18 190 35 384 149 68 0 chr2 72906037 72906111 -177781743 + L2 LINE L2 3235 3313 0 1961 154 9 12 chr2 72906434 72906771 -177781083 - L1PB1 LINE L1 -3 6148 5813 272 328 38 76 chr2 72906792 72907030 -177780824 + L2 LINE L2 3025 3253 -19 340 304 88 20 chr2 72907492 72907696 -177780158 - L2 LINE L2 -852 2462 2245 362 255 92 0 chr2 72908829 72908927 -177778927 - MIR SINE MIR 0 262 156 420 259 68 135 chr2 72909050 72909478 -177778376 + MLT1L LTR MaLR 108 611 -4 233 295 108 50 chr2 72909478 72909617 -177778237 - MIR SINE MIR -95 167 21 180 231 154 55 chr2 72910802 72910984 -177776870 + L2 LINE L2 3112 3311 -2 8723 113 12 8 chr2 72911510 72912805 -177775049 + HSMAR2 DNA Mariner 4 1302 0 194 306 24 105 chr2 72913326 72913535 -177774319 + MIR SINE MIR 53 244 -18 21 0 0 0 chr2 72913663 72913684 -177774170 + AT_rich Low_complexity Low_complexity 1 21 0 2391 226 28 11 chr2 72913979 72914518 -177773336 - MER119 DNA MER1_type 0 583 36 1079 243 141 21 chr2 72915452 72916070 -177771784 - L2 LINE L2 0 3313 2617 2517 82 0 0 chr2 72916724 72917030 -177770824 + AluY SINE Alu 1 306 -5 2233 79 3 46 chr2 72917747 72918050 -177769804 + AluY SINE Alu 1 290 -21 504 261 167 14 chr2 72919095 72919233 -177768621 - MER91A DNA MER1_type -1 195 37 610 214 29 12 chr2 72919613 72919786 -177768068 - Charlie7 DNA MER1_type -3 2609 2434 346 297 47 16 chr2 72922002 72922130 -177765724 - MIR3 SINE MIR -3 205 74 625 281 0 29 chr2 72922376 72922547 -177765307 + MER5B DNA MER1_type 1 166 -12 2333 91 0 3 chr2 72923180 72923476 -177764378 + AluSg SINE Alu 1 295 -15 579 210 49 43 chr2 72925554 72925716 -177762138 - MIR SINE MIR -16 246 84 351 248 56 24 chr2 72927036 72927161 -177760693 - MIR SINE MIR 0 262 134 2034 131 20 10 chr2 72927699 72928005 -177759849 + AluSx SINE Alu 2 310 -2 1372 111 106 0 chr2 72929057 72929265 -177758589 + MER30 DNA MER1_type 1 230 0 277 217 0 33 chr2 72929997 72930057 -177757797 - MLT1B LTR MaLR 0 390 333 1777 148 19 41 chr2 72930166 72930484 -177757370 - MLT1B LTR MaLR -79 311 1 2249 45 7 41 chr2 72930765 72931083 -177756771 - AluY SINE Alu 0 308 1 22 35 0 0 chr2 72931088 72931117 -177756737 + AT_rich Low_complexity Low_complexity 1 29 0 1794 118 0 0 chr2 72932124 72932361 -177755493 + AluSx SINE Alu 1 237 -75 2472 67 0 19 chr2 72932384 72932698 -177755156 + AluY SINE Alu 1 308 -3 22 0 0 0 chr2 72933170 72933192 -177754662 + AT_rich Low_complexity Low_complexity 1 22 0 359 303 85 6 chr2 72936327 72936492 -177751362 - MIR SINE MIR -71 191 14 1439 167 0 0 chr2 72936566 72936781 -177751073 + Tigger7 DNA MER2_type 45 259 -2228 580 172 10 10 chr2 72936809 72936908 -177750946 + Tigger7 DNA MER2_type 2489 2587 0 506 262 42 8 chr2 72937107 72937268 -177750586 - L1ME LINE L1 -452 5669 5504 273 324 106 35 chr2 72938325 72938495 -177749359 + L2 LINE L2 3091 3272 0 301 173 0 0 chr2 72940299 72940351 -177747503 + L1MC4 LINE L1 6652 6703 -1339 258 239 0 0 chr2 72940358 72940429 -177747425 + (TA)n Simple_repeat Simple_repeat 2 72 0 249 33 0 0 chr2 72940585 72940615 -177747239 + (TC)n Simple_repeat Simple_repeat 1 30 0 190 242 113 32 chr2 72940747 72940809 -177747045 - L2 LINE L2 -39 3274 3208 2240 102 3 7 chr2 72940885 72941190 -177746664 - AluSc SINE Alu -5 304 1 218 250 0 0 chr2 72941316 72941368 -177746486 - L2 LINE L2 -6 3266 3215 186 375 114 17 chr2 72941426 72941663 -177746191 + L2 LINE L2 2961 3220 -52 997 282 139 9 chr2 72941672 72942097 -177745757 + L2 LINE L2 1778 2257 -1057 233 137 68 14 chr2 72942394 72942467 -177745387 + (TATAA)n Simple_repeat Simple_repeat 4 80 0 500 281 58 23 chr2 72942468 72942639 -177745215 - MIR SINE MIR -2 260 84 688 292 122 83 chr2 72944095 72944901 -177742953 + L2 LINE L2 2440 3272 0 4900 278 50 60 chr2 72945215 72947334 -177740520 + L1PB4 LINE L1 10 2107 -4742 14905 176 14 12 chr2 72947340 72951055 -177736799 + L1PB4 LINE L1 3133 6856 -2 249 101 145 29 chr2 73051763 73051793 -177636061 - MER46B DNA MER2_type -2669 62 142 1378 161 59 49 chr2 73051793 73052079 -177635775 + AluJo SINE Alu 4 292 -20 249 101 145 29 chr2 73052079 73052117 -177635737 - MER46B DNA MER2_type -2588 143 111 241 275 14 14 chr2 73052213 73052282 -177635572 + Charlie4 DNA MER1_type 1893 1961 0 1009 196 11 0 chr2 73052754 73052933 -177634921 - AluSg/x SINE Alu -11 299 119 2142 86 0 4 chr2 73053540 73053808 -177634046 - AluSc SINE Alu -42 267 1 21 36 0 0 chr2 73053816 73053844 -177634010 + AT_rich Low_complexity Low_complexity 1 28 0 184 281 37 73 chr2 73054012 73054094 -177633760 + MIR SINE MIR 43 121 -141 956 167 154 47 chr2 73054325 73054375 -177633479 - L1MB3 LINE L1 0 6183 6140 231 36 0 0 chr2 73054375 73054403 -177633451 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2011 68 64 0 chr2 73054403 73054653 -177633201 - AluY SINE Alu -19 292 27 956 167 154 47 chr2 73054653 73054834 -177633020 - L1MB3 LINE L1 -42 6141 5926 2198 96 0 0 chr2 73055133 73055442 -177632412 + AluSg SINE Alu 1 309 0 2322 113 0 0 chr2 73055612 73055921 -177631933 + AluSx SINE Alu 1 309 -3 282 203 16 31 chr2 73055979 73056043 -177631811 + MER5A DNA MER1_type 124 186 -3 212 227 0 80 chr2 73055980 73056055 -177631799 - MER5A DNA MER1_type -114 75 7 * 728 226 58 24 chr2 73056317 73056529 -177631325 - MER87 LTR ERV1 -329 212 1 1888 142 10 35 chr2 73057149 73057460 -177630394 - AluJb SINE Alu -9 303 1 263 264 19 0 chr2 73057794 73057847 -177630007 + MIR SINE MIR 50 103 -159 1956 82 4 0 chr2 73058005 73058249 -177629605 - AluSp SINE Alu -12 301 57 1112 103 0 0 chr2 73058388 73058533 -177629321 - FRAM SINE Alu -10 166 22 201 328 123 18 chr2 73058701 73058872 -177628982 + MIR SINE MIR 4 192 -70 1359 163 5 0 chr2 73059172 73059393 -177628461 - AluJo SINE Alu -4 308 87 3363 211 103 55 chr2 73060025 73060574 -177627280 - Charlie2a DNA MER1_type -334 2528 2007 2070 136 0 7 chr2 73060574 73060876 -177626978 + AluSx SINE Alu 1 300 -12 3363 211 103 55 chr2 73060876 73061154 -177626700 - Charlie2a DNA MER1_type -855 2007 1744 2299 87 0 10 chr2 73061154 73061454 -177626400 - AluSg SINE Alu -13 297 1 3363 211 103 55 chr2 73061454 73061863 -177625991 - Charlie2a DNA MER1_type -1118 1744 1232 440 255 114 78 chr2 73062073 73062232 -177625622 - L1MB3 LINE L1 -341 5780 5628 2156 110 0 29 chr2 73062232 73062540 -177625314 - AluSx SINE Alu -13 299 1 2182 133 33 40 chr2 73062546 73062945 -177624909 - L1MB3 LINE L1 0 6183 5788 440 255 114 78 chr2 73062945 73063276 -177624578 - L1MB3 LINE L1 -497 5624 5265 2060 136 3 7 chr2 73063369 73063678 -177624176 - AluSx SINE Alu -4 308 1 2381 91 0 0 chr2 73063833 73064129 -177623725 - AluSc SINE Alu -12 297 2 2268 77 6 61 chr2 73064198 73064389 -177623465 - AluY SINE Alu -2 309 142 2478 77 0 0 chr2 73064389 73064699 -177623155 - AluY SINE Alu -1 310 1 2268 77 6 61 chr2 73064699 73064833 -177623021 - AluY SINE Alu -169 142 2 194 212 0 0 chr2 73064871 73064904 -177622950 - MIR SINE MIR -102 106 74 989 181 16 36 chr2 73064965 73065158 -177622696 - MER20 DNA MER1_type -12 207 19 22 56 0 0 chr2 73065419 73065455 -177622399 + AT_rich Low_complexity Low_complexity 1 36 0 1782 151 43 0 chr2 73065470 73065749 -177622105 - AluJb SINE Alu -17 295 5 885 228 42 14 chr2 73068419 73068634 -177619220 - MIR SINE MIR -41 221 1 3951 175 37 20 chr2 73069196 73069933 -177617921 + MER49 LTR ERV1 175 923 0 23 0 0 0 chr2 73069961 73069984 -177617870 + AT_rich Low_complexity Low_complexity 1 23 0 1979 126 3 3 chr2 73069986 73070325 -177617529 - AluSx SINE Alu 0 339 1 30 21 0 21 chr2 73070327 73070355 -177617499 + AT_rich Low_complexity Low_complexity 1 29 -18 874 145 0 0 chr2 73070355 73070472 -177617382 - FLAM_C SINE Alu -15 118 2 30 21 0 21 chr2 73070472 73070491 -177617363 + AT_rich Low_complexity Low_complexity 29 47 0 243 290 119 47 chr2 73070716 73070909 -177616945 - MIR SINE MIR -7 255 49 674 204 53 0 chr2 73070970 73071102 -177616752 + MER5A DNA MER1_type 51 189 0 828 110 0 0 chr2 73071160 73071269 -177616585 + AluSq/x SINE Alu 3 111 -201 1997 144 0 0 chr2 73071461 73071760 -177616094 + AluSx SINE Alu 1 299 -13 387 236 22 11 chr2 73072101 73072190 -177615664 + MER5C DNA MER1_type 5 94 -230 425 233 43 0 chr2 73072212 73072328 -177615526 + MER94 DNA DNA 11 131 -3 7263 79 0 0 chr2 73072659 73073597 -177614257 - L1PA7 LINE L1 -1484 4662 3725 5763 60 2 0 chr2 73073595 73074880 -177612974 + L1PA7 LINE L1 4675 5962 -192 * 261 243 79 0 chr2 73074980 73075070 -177612784 - L1ME2 LINE L1 -223 5941 5860 829 114 9 0 chr2 73075475 73075589 -177612265 + AluJb SINE Alu 98 212 -100 219 69 0 0 chr2 73075590 73075619 -177612235 + (GA)n Simple_repeat Simple_repeat 2 30 0 853 158 0 0 chr2 73075845 73075972 -177611882 + AluSx SINE Alu 47 173 -139 2394 86 10 0 chr2 73077046 73077349 -177610505 - AluSq SINE Alu -7 306 1 369 296 99 5 chr2 73077397 73077610 -177610244 - L1ME2 LINE L1 -239 5882 5650 * 3724 190 64 29 chr2 73077609 73078112 -177609742 + L1ME1 LINE L1 5230 5780 -386 1701 140 0 0 chr2 73078112 73078347 -177609507 + AluSx SINE Alu 1 235 -77 3724 190 64 29 chr2 73078347 73078743 -177609111 + L1ME1 LINE L1 5780 6161 -5 369 0 0 0 chr2 73079368 73079409 -177608445 + (TG)n Simple_repeat Simple_repeat 2 42 0 6041 58 17 7 chr2 73079428 73080197 -177607657 - L1PA7 LINE L1 0 6154 5378 23 92 0 0 chr2 73080494 73080559 -177607295 + AT_rich Low_complexity Low_complexity 1 65 0 1983 149 0 0 chr2 73080566 73080874 -177606980 + AluSx SINE Alu 1 308 0 919 252 100 71 chr2 73080951 73081369 -177606485 - L1ME LINE L1 -372 5790 5386 2050 131 0 21 chr2 73081369 73081659 -177606195 - AluSx SINE Alu -24 288 5 919 252 100 71 chr2 73081659 73082045 -177605809 - L1ME LINE L1 -776 5386 4946 1923 164 0 6 chr2 73082045 73082356 -177605498 - AluJo SINE Alu -3 309 1 919 252 100 71 chr2 73082356 73082571 -177605283 - L1ME LINE L1 -1216 4946 4739 2352 104 0 7 chr2 73082632 73082940 -177604914 - AluSc SINE Alu -3 306 1 2410 87 7 3 chr2 73083529 73083839 -177604015 - AluSp SINE Alu -2 311 1 460 259 201 0 chr2 73083932 73084156 -177603698 - L1ME4a LINE L1 -56 6065 5797 2026 140 0 31 chr2 73084253 73084575 -177603279 - AluJb SINE Alu 0 312 1 2324 116 0 0 chr2 73084578 73084889 -177602965 - AluSx SINE Alu -1 311 1 322 263 76 17 chr2 73084892 73085010 -177602844 - L1ME4a LINE L1 -456 5665 5541 292 278 134 0 chr2 73085018 73085115 -177602739 - L2 LINE L2 -4 3309 3200 1392 173 92 11 chr2 73085122 73085406 -177602448 - AluJo SINE Alu -5 307 1 365 345 42 0 chr2 73085573 73085692 -177602162 - L2 LINE L2 0 3272 3149 832 220 0 0 chr2 73085875 73086016 -177601838 + FRAM SINE Alu 1 138 -38 2314 64 0 0 chr2 73086151 73086455 -177601399 - AluY SINE Alu 0 304 1 820 149 26 108 chr2 73086455 73086650 -177601204 - AluSg/x SINE Alu -14 298 120 849 142 0 0 chr2 73086667 73086794 -177601060 - AluSg/x SINE Alu -13 297 171 463 136 0 15 chr2 73086895 73086961 -177600893 - FRAM SINE Alu -60 116 52 336 179 64 13 chr2 73086965 73087043 -177600811 - Charlie2a DNA MER1_type -1660 1202 1121 729 157 0 0 chr2 73087044 73087152 -177600702 + FLAM_C SINE Alu 1 108 -35 1016 267 80 102 chr2 73087152 73088746 -177599108 + L1MEd LINE L1 99 1747 -743 747 191 0 0 chr2 73088772 73088898 -177598956 + FLAM_C SINE Alu 6 131 -12 478 174 0 0 chr2 73088911 73088980 -177598874 + AluJ/FRAM SINE Alu 218 286 -26 1215 250 86 13 chr2 73088986 73089370 -177598484 + HAL1 LINE L1 101 512 -1995 2024 251 77 21 chr2 73089370 73089889 -177597965 - MLT1H1 LTR MaLR 0 555 8 654 260 110 48 chr2 73089914 73090206 -177597648 + HAL1 LINE L1 517 826 -1681 694 134 84 128 chr2 73090206 73090385 -177597469 + MER53 DNA DNA 1 171 -18 2488 73 0 6 chr2 73090386 73090699 -177597155 - AluY SINE Alu 0 311 1 297 0 0 0 chr2 73090699 73090732 -177597122 + (T)n Simple_repeat Simple_repeat 1 33 0 639 258 24 12 chr2 73090919 73091086 -177596768 + FAM SINE Alu 1 169 -6 959 18 0 0 chr2 73091247 73091359 -177596495 - L1PA4 LINE L1 -179 5976 5865 295 224 184 0 chr2 73091359 73091435 -177596419 + MLT1A1 LTR MaLR 276 365 0 827 156 7 0 chr2 73091484 73091619 -177596235 - AluJo SINE Alu -174 138 3 1537 119 5 9 chr2 73091639 73091857 -177595997 + AluJb SINE Alu 84 300 -12 14210 113 40 8 chr2 73092406 73094531 -177593323 - Tigger1 DNA MER2_type 0 2418 226 804 197 0 0 chr2 73094558 73094695 -177593159 + FLAM_C SINE Alu 1 137 -6 1879 167 21 12 chr2 73094695 73095025 -177592829 - MLT1A1 LTR MaLR -32 333 1 221 225 0 0 chr2 73095364 73095404 -177592450 - MIR SINE MIR -106 156 117 209 268 54 71 chr2 73095862 73095974 -177591880 - MIR3 SINE MIR -92 116 7 1609 164 43 16 chr2 73096053 73096380 -177591474 + AluJo SINE Alu 1 312 0 926 162 48 0 chr2 73096916 73097083 -177590771 + AluJo SINE Alu 120 294 -18 1214 82 0 0 chr2 73097448 73097606 -177590248 + L1MA2 LINE L1 6147 6304 0 23 0 0 0 chr2 73097606 73097629 -177590225 + AT_rich Low_complexity Low_complexity 1 23 0 293 268 177 30 chr2 73097680 73097844 -177590010 + L1ME3A LINE L1 5924 6111 -59 551 330 115 11 chr2 73097870 73098321 -177589533 + L1M4 LINE L1 3427 3924 -2222 * 1123 154 16 6 chr2 73098290 73098507 -177589347 + L1MB7 LINE L1 5747 5962 -208 1922 152 10 3 chr2 73098594 73098903 -177588951 + AluSx SINE Alu 1 311 -1 364 214 61 0 chr2 73098911 73099009 -177588845 + L1M4 LINE L1 3847 3950 -2196 43 0 0 0 chr2 73099167 73099210 -177588644 + AT_rich Low_complexity Low_complexity 1 43 0 2235 123 0 0 chr2 73099244 73099546 -177588308 - AluSx SINE Alu -10 302 1 323 211 79 35 chr2 73099765 73099879 -177587975 - L1ME4a LINE L1 -7 6114 5996 1564 167 3 38 chr2 73099879 73100172 -177587682 - AluJb SINE Alu -9 303 21 456 263 135 72 chr2 73100395 73100840 -177587014 + MLT1H LTR MaLR 73 545 -4 21 0 0 0 chr2 73101076 73101097 -177586757 + AT_rich Low_complexity Low_complexity 1 21 0 530 189 135 0 chr2 73101260 73101371 -177586483 + FLAM_A SINE Alu 3 128 -5 1417 155 62 7 chr2 73101661 73101951 -177585903 + L1MB7 LINE L1 5879 6184 0 2322 81 0 29 chr2 73102497 73102804 -177585050 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr2 73102834 73102856 -177584998 + AT_rich Low_complexity Low_complexity 1 22 0 244 295 0 0 chr2 73103131 73103209 -177584645 + (TA)n Simple_repeat Simple_repeat 1 78 0 952 83 8 8 chr2 73103286 73103407 -177584447 - FLAM_C SINE Alu -17 126 6 271 295 108 49 chr2 73103687 73103975 -177583879 + MLT1H LTR MaLR 134 438 -111 619 157 10 0 chr2 73104281 73104383 -177583471 - U13 snRNA snRNA -1 103 1 4894 155 45 16 chr2 73104392 73104633 -177583221 - L1MB8 LINE L1 0 6178 5945 415 32 63 0 chr2 73104633 73104696 -177583158 + T-rich Low_complexity Low_complexity 2 68 0 2075 142 0 0 chr2 73104696 73104978 -177582876 - AluSx SINE Alu -30 282 1 4894 155 45 16 chr2 73104978 73105559 -177582295 - L1MB8 LINE L1 -233 5945 5312 1855 127 0 4 chr2 73105559 73105819 -177582035 - AluSg SINE Alu -51 259 1 4894 155 45 16 chr2 73105819 73106027 -177581827 - L1MB8 LINE L1 -866 5312 5111 614 263 80 111 chr2 73106256 73106618 -177581236 - MLT1G1 LTR MaLR -50 505 182 2238 132 0 0 chr2 73106618 73106922 -177580932 - AluSx SINE Alu -8 304 1 614 263 80 111 chr2 73106922 73107099 -177580755 - MLT1G1 LTR MaLR -373 182 1 328 181 9 105 chr2 73107184 73107289 -177580565 + MIR SINE MIR 160 254 -8 1414 230 42 24 chr2 73107409 73107792 -177580062 - HAL1 LINE L1 -767 1740 1351 709 220 129 39 chr2 73107875 73108062 -177579792 - HAL1 LINE L1 -1293 1214 1045 910 192 30 0 chr2 73108062 73108229 -177579625 - FAM SINE Alu -3 172 1 709 220 129 39 chr2 73108229 73108404 -177579450 - HAL1 LINE L1 -1462 1045 819 306 0 0 0 chr2 73108415 73108449 -177579405 + (A)n Simple_repeat Simple_repeat 1 34 0 841 108 0 0 chr2 73108449 73108560 -177579294 + AluY SINE Alu 1 111 -200 254 253 12 24 chr2 73109638 73109721 -177578133 - MIR SINE MIR -169 93 12 640 172 26 17 chr2 73109990 73110106 -177577748 + MER63 DNA MER1_type 1 743 -319 253 290 14 0 chr2 73110151 73110220 -177577634 + MER63 DNA MER1_type 985 1054 -8 2273 116 7 0 chr2 73111791 73112101 -177575753 - AluSx SINE Alu 0 312 1 226 313 78 17 chr2 73112216 73112331 -177575523 - MIR SINE MIR -120 142 21 703 298 72 36 chr2 73112510 73112926 -177574928 + MLT1K LTR MaLR 158 588 0 418 281 118 17 chr2 73113030 73113318 -177574536 - L2 LINE L2 -408 2906 2590 204 282 0 35 chr2 73113358 73113443 -177574411 - L2 LINE L2 -939 2375 2294 584 266 0 4 chr2 73115268 73115496 -177572358 + (CA)n Simple_repeat Simple_repeat 1 226 0 1740 112 0 4 chr2 73115574 73115806 -177572048 - AluSg SINE Alu -16 294 64 234 0 0 0 chr2 73115855 73115881 -177571973 + (T)n Simple_repeat Simple_repeat 1 26 0 22 56 0 0 chr2 73116125 73116161 -177571693 + GC_rich Low_complexity Low_complexity 1 36 0 216 0 0 0 chr2 73116793 73116817 -177571037 + (A)n Simple_repeat Simple_repeat 1 24 0 24 0 0 0 chr2 73117250 73117274 -177570580 + AT_rich Low_complexity Low_complexity 1 24 0 343 205 36 12 chr2 73118892 73118975 -177568879 - L2 LINE L2 0 3272 3188 377 252 39 31 chr2 73119420 73119547 -177568307 + MIR SINE MIR 1 128 -134 384 214 303 0 chr2 73119553 73119698 -177568156 + MER5A DNA MER1_type 1 189 0 180 279 209 0 chr2 73119698 73119781 -177568073 + MIR SINE MIR 162 262 0 243 0 0 0 chr2 73119822 73119849 -177568005 + (GA)n Simple_repeat Simple_repeat 1 27 0 * 360 0 0 0 chr2 73119848 73119888 -177567966 + (TG)n Simple_repeat Simple_repeat 2 41 0 221 313 60 12 chr2 73120943 73121026 -177566828 - L2 LINE L2 -28 3244 3158 440 300 119 65 chr2 73122445 73122782 -177565072 - L2 LINE L2 0 3272 2918 793 155 109 26 chr2 73122843 73122903 -177564951 - MER3 DNA MER1_type 0 209 155 2396 106 0 0 chr2 73122903 73123214 -177564640 + AluSx SINE Alu 1 311 -1 793 155 109 26 chr2 73123214 73123346 -177564508 - MER3 DNA MER1_type -54 155 1 1333 216 113 19 chr2 73123453 73123824 -177564030 - Charlie7 DNA MER1_type -1920 692 287 308 204 62 80 chr2 73123851 73123964 -177563890 - Charlie7 DNA MER1_type -2413 199 89 4657 157 57 9 chr2 73123966 73124888 -177562966 - L1MB3 LINE L1 -31 6152 5192 284 176 0 59 chr2 73124894 73124979 -177562875 - Charlie7 DNA MER1_type -2496 116 37 483 303 46 59 chr2 73125566 73125889 -177561965 - L2 LINE L2 -368 2946 2628 280 286 20 51 chr2 73125926 73126024 -177561830 + MER5B DNA MER1_type 84 178 0 576 255 67 51 chr2 73126124 73126426 -177561428 + Charlie8 DNA MER1_type 22 323 -2094 221 288 45 45 chr2 73126520 73126631 -177561223 - L2 LINE L2 -516 2798 2688 1673 155 46 7 chr2 73126631 73126915 -177560939 + AluJo SINE Alu 1 295 -17 254 196 11 120 chr2 73127176 73127268 -177560586 + MIR SINE MIR 110 191 -71 227 333 35 0 chr2 73127332 73127419 -177560435 - L2 LINE L2 0 3272 3183 3038 166 15 4 chr2 73127470 73128006 -177559848 + L1MB4 LINE L1 5639 6180 0 418 186 39 115 chr2 73128006 73128096 -177559758 + L1M4 LINE L1 3034 3109 -3037 2272 85 7 7 chr2 73128096 73128228 -177559626 + AluSc SINE Alu 1 132 -177 180 0 0 0 chr2 73128228 73128248 -177559606 + (TA)n Simple_repeat Simple_repeat 2 21 0 2272 85 7 7 chr2 73128248 73128408 -177559446 + AluSc SINE Alu 131 293 -16 418 186 39 115 chr2 73128408 73128473 -177559381 + L1M4 LINE L1 3109 3177 -2969 201 348 71 9 chr2 73128663 73128775 -177559079 + L2 LINE L2 3153 3271 -1 771 153 0 44 chr2 73128922 73129059 -177558795 - FLAM_C SINE Alu -2 131 1 1324 96 0 0 chr2 73129179 73129356 -177558498 + AluSp SINE Alu 137 313 0 574 289 36 31 chr2 73129500 73129694 -177558160 + MER91A DNA MER1_type 2 196 0 242 206 10 49 chr2 73130504 73130606 -177557248 + (TA)n Simple_repeat Simple_repeat 2 99 0 193 75 50 0 chr2 73130610 73130650 -177557204 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 519 212 18 1 chr2 73130702 73130849 -177557005 - L1ME2 LINE L1 -36 6134 5997 1854 106 97 56 chr2 73131245 73131605 -177556249 + THE1C LTR MaLR 1 375 0 2678 209 115 48 chr2 73131730 73132110 -177555744 - L1ME3A LINE L1 -5 6165 5812 1887 126 33 0 chr2 73132110 73132380 -177555474 - AluJo SINE Alu -33 279 1 2678 209 115 48 chr2 73132380 73132792 -177555062 - L1ME3A LINE L1 -358 5812 5320 1989 234 111 12 chr2 73132852 73133445 -177554409 - L1MC4a LINE L1 -2 7806 7155 1638 264 79 32 chr2 73133467 73134227 -177553627 - L1ME3A LINE L1 -869 5277 4473 2082 126 3 3 chr2 73134227 73134521 -177553333 - AluSx SINE Alu -18 294 1 1638 264 79 32 chr2 73134521 73134594 -177553260 - L1ME3A LINE L1 -1673 4473 4405 971 188 53 10 chr2 73134647 73134855 -177552999 + MER20 DNA MER1_type 1 217 -2 522 180 180 14 chr2 73135035 73135174 -177552680 + LTR40a LTR ERVL 1 162 -357 837 107 0 64 chr2 73135264 73135404 -177552450 + FLAM_C SINE Alu 1 131 -2 2189 126 0 0 chr2 73135426 73135711 -177552143 + AluSq SINE Alu 1 285 -28 701 276 0 12 chr2 73135760 73135923 -177551931 + LTR40a LTR ERVL 237 397 -122 496 68 0 0 chr2 73137175 73137248 -177550606 - Alu SINE Alu 0 310 238 304 261 87 26 chr2 73139201 73139316 -177548538 + MIR3 SINE MIR 86 207 -1 868 137 0 0 chr2 73139417 73139534 -177548320 - FLAM_C SINE Alu -26 117 1 581 318 125 42 chr2 73140002 73140386 -177547468 + L2 LINE L2 2761 3215 -98 2419 92 0 3 chr2 73140386 73140692 -177547162 - AluSx SINE Alu -7 305 1 581 318 125 42 chr2 73140692 73140800 -177547054 + L2 LINE L2 3215 3313 0 1912 149 0 14 chr2 73140895 73141190 -177546664 + AluJb SINE Alu 1 291 -21 37 0 0 0 chr2 73141190 73141227 -177546627 + AT_rich Low_complexity Low_complexity 1 37 0 235 269 46 9 chr2 73141283 73141391 -177546463 - L2 LINE L2 -1389 1925 1814 43 35 0 0 chr2 73141411 73141468 -177546386 + AT_rich Low_complexity Low_complexity 1 57 0 201 295 151 40 chr2 73141517 73141887 -177545967 - L2 LINE L2 -1668 1646 1236 228 237 145 13 chr2 73142143 73142219 -177545635 + MIR3 SINE MIR 122 207 -1 585 298 86 7 chr2 73143251 73143581 -177544273 - L1MC4a LINE L1 -320 5801 5526 248 244 0 12 chr2 73143594 73143680 -177544174 + CT-rich Low_complexity Low_complexity 4 88 0 714 152 40 8 chr2 73144038 73144163 -177543691 - FLAM_C SINE Alu -4 129 1 1675 79 0 0 chr2 73144369 73144583 -177543271 - pTR5 LTR ERV1 -2044 394 181 348 227 37 56 chr2 73144583 73144690 -177543164 - LTR30 LTR ERV1 -80 642 375 5779 101 42 27 chr2 73144691 73145803 -177542051 - pTR5 LTR ERV1 -410 2028 741 198 323 6 54 chr2 73145805 73145972 -177541882 - L2 LINE L2 -796 2518 2360 550 191 76 64 chr2 73146035 73146192 -177541662 - MLT1H LTR MaLR 0 549 384 1869 131 28 21 chr2 73146211 73146502 -177541352 - AluSx SINE Alu -19 293 1 656 234 168 35 chr2 73146502 73146842 -177541012 - Charlie2 DNA MER1_type -2349 513 68 533 284 168 49 chr2 73146885 73147416 -177540438 - L2 LINE L2 -1154 2160 1567 1525 230 139 39 chr2 73147435 73148234 -177539620 + L2 LINE L2 2412 3310 -3 28 86 0 0 chr2 73149416 73149486 -177538368 + AT_rich Low_complexity Low_complexity 1 70 0 344 308 75 0 chr2 73150235 73150355 -177537499 - MIR3 SINE MIR -38 170 42 1005 228 23 23 chr2 73150957 73151176 -177536678 + MER20 DNA MER1_type 1 219 0 659 110 43 98 chr2 73151315 73151407 -177536447 - L1MB5 LINE L1 0 6174 6116 585 216 78 0 chr2 73151407 73151523 -177536331 + FLAM_A SINE Alu 1 125 -8 659 110 43 98 chr2 73151523 73151623 -177536231 - L1MB5 LINE L1 -58 6116 6012 837 171 0 0 chr2 73151623 73151746 -177536108 - AluSq/x SINE Alu -187 125 3 429 321 23 8 chr2 73151809 73151940 -177535914 - L2 LINE L2 -6 3266 3134 1622 214 123 39 chr2 73152634 73153096 -177534758 - MLT1D LTR MaLR -2 503 3 207 0 0 0 chr2 73153130 73153153 -177534701 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 975 176 151 0 chr2 73153646 73153845 -177534009 - LTR48B LTR ERV1 -415 229 1 696 245 83 37 chr2 73153853 73154079 -177533775 + L1MC4a LINE L1 5698 5945 -1863 1999 117 11 3 chr2 73154079 73154362 -177533492 + AluSx SINE Alu 16 300 -12 696 245 83 37 chr2 73154362 73154461 -177533393 + L1MC4a LINE L1 5945 6038 -1770 1775 193 0 3 chr2 73154829 73155135 -177532719 - AluJo SINE Alu -7 305 1 723 291 62 21 chr2 73155397 73155638 -177532216 - MIR SINE MIR -2 260 10 1674 154 70 7 chr2 73155665 73155950 -177531904 + AluSx SINE Alu 1 303 -9 270 238 28 127 chr2 73156446 73156627 -177531227 - L2 LINE L2 -188 3084 2922 287 284 135 28 chr2 73157037 73157178 -177530676 + L2 LINE L2 3116 3271 -1 243 241 0 35 chr2 73157355 73157413 -177530441 + L2 LINE L2 2929 2984 -329 287 308 108 8 chr2 73157773 73157893 -177529961 + MER5A DNA MER1_type 53 184 -5 371 247 157 45 chr2 73157955 73158178 -177529676 - MLT1L LTR MaLR -245 370 123 891 141 9 146 chr2 73158783 73158849 -177529005 - MER5A DNA MER1_type 0 189 116 766 183 15 8 chr2 73158849 73158980 -177528874 - FLAM_A SINE Alu -1 132 1 891 141 9 146 chr2 73158980 73159126 -177528728 - MER5A DNA MER1_type -73 116 6 2101 140 18 58 chr2 73159426 73159759 -177528095 + L1MB4 LINE L1 5804 6120 -60 1863 139 32 0 chr2 73159759 73160039 -177527815 + AluJb SINE Alu 1 289 -23 2101 140 18 58 chr2 73160039 73160098 -177527756 + L1MB4 LINE L1 6120 6180 0 1760 206 34 56 chr2 73160129 73160575 -177527279 - MER63B DNA MER1_type 0 436 1 208 190 52 52 chr2 73160770 73160828 -177527026 + MIR SINE MIR 96 153 -55 411 129 0 29 chr2 73160906 73160976 -177526878 + HY3 scRNA scRNA 33 100 -1 27 0 0 0 chr2 73161188 73161215 -177526639 + AT_rich Low_complexity Low_complexity 1 27 0 26 0 0 0 chr2 73161330 73161356 -177526498 + AT_rich Low_complexity Low_complexity 1 26 0 2105 122 3 7 chr2 73161356 73161650 -177526204 - AluSx SINE Alu -19 293 1 288 0 0 0 chr2 73161660 73161692 -177526162 + (TA)n Simple_repeat Simple_repeat 1 32 0 289 186 197 96 chr2 73161908 73161994 -177525860 - L1ME LINE L1 -469 5652 5576 2223 102 3 13 chr2 73161994 73162297 -177525557 + AluSc SINE Alu 1 300 -9 289 186 197 96 chr2 73162297 73162398 -177525456 - L1ME LINE L1 -545 5576 5446 1513 152 0 0 chr2 73162406 73162630 -177525224 - AluSx SINE Alu -88 224 1 1775 169 0 23 chr2 73162652 73162954 -177524900 + AluJo SINE Alu 1 295 -17 21 36 0 0 chr2 73162995 73163023 -177524831 + AT_rich Low_complexity Low_complexity 1 28 0 1992 131 20 10 chr2 73163168 73163466 -177524388 + AluSx SINE Alu 1 301 -11 255 183 33 17 chr2 73163746 73163806 -177524048 + MIR3 SINE MIR 137 197 -11 34 42 0 0 chr2 73164089 73164137 -177523717 + AT_rich Low_complexity Low_complexity 1 48 0 2500 63 0 0 chr2 73164148 73164449 -177523405 - AluY SINE Alu -10 301 1 301 242 16 0 chr2 73165074 73165136 -177522718 + MIR SINE MIR 196 258 -4 768 177 31 8 chr2 73165202 73165318 -177522536 + AluJo SINE Alu 2 123 -189 234 0 0 0 chr2 73165318 73165344 -177522510 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 768 177 31 8 chr2 73165344 73165357 -177522497 + AluJo SINE Alu 123 134 -178 2267 180 42 8 chr2 73165357 73165862 -177521992 - Charlie5 DNA MER1_type -8 2604 2083 1775 186 120 42 chr2 73165859 73165957 -177521897 - Charlie5 DNA MER1_type -2022 602 513 * 916 97 0 0 chr2 73165957 73166071 -177521783 + FLAM_C SINE Alu 2 115 -18 1775 186 120 42 chr2 73166071 73166522 -177521332 - Charlie5 DNA MER1_type -2111 513 10 980 183 6 0 chr2 73166558 73166722 -177521132 + AluJo SINE Alu 137 301 -1 24 67 0 0 chr2 73166894 73166939 -177520915 + AT_rich Low_complexity Low_complexity 1 45 0 231 161 0 0 chr2 73167166 73167222 -177520632 + (CA)n Simple_repeat Simple_repeat 2 57 0 23 0 0 0 chr2 73167932 73167955 -177519899 + AT_rich Low_complexity Low_complexity 1 23 0 2452 81 0 0 chr2 73167980 73168278 -177519576 - AluSg SINE Alu -12 298 1 4254 133 26 40 chr2 73168994 73169393 -177518461 - L1MB3 LINE L1 -7 6176 5792 216 0 0 0 chr2 73169393 73169417 -177518437 + (CA)n Simple_repeat Simple_repeat 2 25 0 4254 133 26 40 chr2 73169417 73169760 -177518094 - L1MB3 LINE L1 -391 5792 5445 786 205 91 103 chr2 73169760 73170023 -177517831 - L1ME2 LINE L1 -57 6107 5848 222 255 0 0 chr2 73170251 73170302 -177517552 - L2 LINE L2 -1 3271 3221 641 264 77 29 chr2 73170619 73170865 -177516989 - MIR SINE MIR 0 262 5 268 240 67 0 chr2 73171143 73171218 -177516636 + MIR3 SINE MIR 115 194 -14 234 184 28 28 chr2 73172241 73172350 -177515504 + (TA)n Simple_repeat Simple_repeat 1 109 0 225 298 106 19 chr2 73172375 73172479 -177515375 + MIR SINE MIR 2 114 -148 203 261 0 0 chr2 73172914 73172960 -177514894 + L2 LINE L2 3223 3268 -4 849 157 0 22 chr2 73173111 73173245 -177514609 + FLAM_C SINE Alu 1 131 -2 214 329 161 12 chr2 73173697 73173858 -177513996 + MIR SINE MIR 29 213 -49 2312 88 3 0 chr2 73173984 73174280 -177513574 - AluSx SINE Alu -15 297 1 225 211 0 0 chr2 73175036 73175093 -177512761 + (CA)n Simple_repeat Simple_repeat 2 58 0 1926 152 3 16 chr2 73175126 73175441 -177512413 + AluJo SINE Alu 2 312 0 221 247 144 41 chr2 73176491 73176588 -177511266 - MIR SINE MIR -120 142 36 204 204 0 0 chr2 73176902 73176946 -177510908 - MIR SINE MIR -8 254 211 2397 88 7 0 chr2 73177054 73177361 -177510493 + AluSc SINE Alu 1 309 0 2467 84 0 0 chr2 73177897 73178247 -177509607 - AluSg SINE Alu 0 350 1 1334 109 52 0 chr2 73178247 73178440 -177509414 - AluSq SINE Alu -110 203 1 4596 203 67 37 chr2 73178440 73178658 -177509196 - MER21B-int LTR ERV1 -3001 1190 980 2410 84 0 3 chr2 73178658 73178957 -177508897 - AluSq SINE Alu -15 298 1 4596 203 67 37 chr2 73178957 73179776 -177508078 - MER21B-int LTR ERV1 -3211 980 122 318 219 73 0 chr2 73180006 73180088 -177507766 - LTR43 LTR ERV1 -326 276 189 2075 123 0 7 chr2 73180264 73180593 -177507261 - AluSx SINE Alu 0 327 1 795 131 25 0 chr2 73180636 73180758 -177507096 - MER21B-int LTR ERV1 -4066 125 1 443 175 117 58 chr2 73180840 73180960 -177506894 - MER21B LTR ERV1 -78 785 659 738 51 31 0 chr2 73180960 73181058 -177506796 + MER30 DNA MER1_type 1 101 -129 192 40 0 0 chr2 73181256 73181281 -177506573 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 763 71 20 0 chr2 73181282 73181380 -177506474 + AluSc SINE Alu 2 101 -208 1773 75 0 0 chr2 73181380 73181620 -177506234 + AluSc SINE Alu 67 306 0 2243 110 0 19 chr2 73182400 73182709 -177505145 - AluSx SINE Alu -9 303 1 23 33 0 0 chr2 73182879 73182909 -177504945 + AT_rich Low_complexity Low_complexity 1 30 0 427 232 226 0 chr2 73184480 73184644 -177503210 + MIR SINE MIR 59 259 -3 34 55 0 0 chr2 73184733 73184788 -177503066 + AT_rich Low_complexity Low_complexity 1 55 0 744 125 0 102 chr2 73184788 73184916 -177502938 - FLAM_A SINE Alu -18 115 1 291 28 0 0 chr2 73185534 73185570 -177502284 + (CA)n Simple_repeat Simple_repeat 1 36 0 235 279 126 9 chr2 73185717 73185828 -177502026 + L3 LINE CR1 630 753 -824 1900 167 3 0 chr2 73186256 73186562 -177501292 - AluJb SINE Alu -5 307 1 259 278 102 53 chr2 73187145 73187279 -177500575 + L1ME4a LINE L1 4275 4401 -1745 2254 99 10 0 chr2 73187279 73187572 -177500282 + AluSc SINE Alu 1 296 -13 259 278 102 53 chr2 73187572 73187966 -177499888 + L1ME4a LINE L1 4401 4829 -1317 1794 164 0 10 chr2 73188228 73188532 -177499322 + AluJb SINE Alu 5 305 -7 316 339 61 12 chr2 73188549 73188714 -177499140 + L1ME4a LINE L1 5256 5428 -693 1020 103 0 0 chr2 73188720 73188846 -177499008 + AluSq/x SINE Alu 1 126 -186 415 121 0 0 chr2 73188849 73188915 -177498939 + Alu SINE Alu 243 308 -2 598 256 170 21 chr2 73188931 73189313 -177498541 + L1ME4a LINE L1 5446 5884 -237 303 303 133 66 chr2 73190405 73190722 -177497132 + L3 LINE CR1 1234 1571 -6 24 0 0 0 chr2 73191529 73191553 -177496301 + AT_rich Low_complexity Low_complexity 1 24 0 4903 167 31 22 chr2 73191732 73192938 -177494916 - L1MB3 LINE L1 -3 6180 4961 1542 298 0 76 chr2 73193828 73194000 -177493854 - AluSx SINE Alu -7 305 168 2351 70 17 3 chr2 73194000 73194298 -177493556 - AluSp SINE Alu -11 302 1 1542 298 0 76 chr2 73194298 73194454 -177493400 - AluSx SINE Alu -144 168 2 1067 90 0 0 chr2 73194576 73194709 -177493145 + AluSq/x SINE Alu 1 133 -180 260 0 57 0 chr2 73194711 73194746 -177493108 + (TAAAAA)n Simple_repeat Simple_repeat 5 41 0 433 255 47 0 chr2 73194912 73195018 -177492836 - L2 LINE L2 0 3313 3203 838 185 0 15 chr2 73195040 73195170 -177492684 - FLAM_A SINE Alu -5 128 1 2151 300 157 5 chr2 73195170 73196043 -177491811 - L2 LINE L2 -1713 1601 559 2090 154 0 3 chr2 73196043 73196354 -177491500 + AluJb SINE Alu 1 310 -2 2151 300 157 5 chr2 73196354 73196467 -177491387 - L2 LINE L2 -2755 559 465 1479 174 40 25 chr2 73196524 73196800 -177491054 + AluJo SINE Alu 1 280 -32 24 0 0 0 chr2 73196835 73196859 -177490995 + AT_rich Low_complexity Low_complexity 1 24 0 2155 135 3 0 chr2 73197024 73197320 -177490534 - AluSc SINE Alu -12 297 1 23 0 0 0 chr2 73197328 73197351 -177490503 + AT_rich Low_complexity Low_complexity 1 23 0 880 214 0 0 chr2 73197355 73197523 -177490331 + AluJb SINE Alu 137 304 -8 247 208 177 10 chr2 73197529 73197625 -177490229 - MER112 DNA MER1_type -101 159 48 2240 113 0 0 chr2 73197630 73197923 -177489931 - AluSx SINE Alu -19 293 1 198 0 0 0 chr2 73198676 73198698 -177489156 + (A)n Simple_repeat Simple_repeat 1 22 0 211 161 32 32 chr2 73199063 73199125 -177488729 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 26 64 0 0 chr2 73199170 73199217 -177488637 + AT_rich Low_complexity Low_complexity 1 47 0 199 312 78 0 chr2 73199333 73199410 -177488444 - L2 LINE L2 -307 3006 2924 239 300 0 0 chr2 73199747 73199807 -177488047 - L2 LINE L2 -567 2747 2688 1322 147 18 18 chr2 73199983 73200201 -177487653 - MER8 DNA MER2_type 0 239 22 2369 85 3 0 chr2 73200517 73200811 -177487043 - AluSp SINE Alu -18 295 1 26 30 0 0 chr2 73200988 73201021 -177486833 + AT_rich Low_complexity Low_complexity 1 33 0 431 190 0 25 chr2 73201251 73201365 -177486489 - AluSx SINE Alu 0 316 205 1022 73 0 0 chr2 73201365 73201488 -177486366 - AluSx SINE Alu -189 123 1 23 0 0 0 chr2 73202023 73202046 -177485808 + AT_rich Low_complexity Low_complexity 1 23 0 2193 107 0 0 chr2 73202146 73202467 -177485387 + AluSx SINE Alu 1 321 0 31 44 0 0 chr2 73202846 73202891 -177484963 + AT_rich Low_complexity Low_complexity 1 45 0 1702 152 38 7 chr2 73202997 73203286 -177484568 + AluJb SINE Alu 1 298 -14 1070 152 8 37 chr2 73203530 73203787 -177484067 - AluJo SINE Alu -14 298 1 32 26 0 0 chr2 73203932 73203971 -177483883 + AT_rich Low_complexity Low_complexity 1 39 0 2315 96 3 3 chr2 73204121 73204423 -177483431 - AluSc SINE Alu -7 302 1 742 202 0 0 chr2 73204974 73205093 -177482761 + FLAM_C SINE Alu 1 119 -24 252 0 0 0 chr2 73206620 73206648 -177481206 + (A)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr2 73207882 73207903 -177479951 + AT_rich Low_complexity Low_complexity 1 21 0 248 231 50 58 chr2 73208040 73208161 -177479693 + L1ME LINE L1 5748 5867 -254 992 158 0 0 chr2 73208975 73209121 -177478733 + FRAM SINE Alu 1 146 -30 326 23 0 23 chr2 73209124 73209168 -177478686 + (TAA)n Simple_repeat Simple_repeat 2 44 0 2191 114 0 10 chr2 73209186 73209485 -177478369 + AluSg1 SINE Alu 1 296 -13 2116 113 3 7 chr2 73210453 73210744 -177477110 + AluSx SINE Alu 4 293 -19 763 157 69 44 chr2 73211509 73211668 -177476186 - AluJb SINE Alu -16 296 134 1953 114 14 0 chr2 73211668 73211949 -177475905 - AluSq SINE Alu -18 295 11 938 162 0 50 chr2 73211955 73212134 -177475720 - AluJo SINE Alu -142 170 1 510 249 64 10 chr2 73212135 73212412 -177475442 + L1ME LINE L1 5175 5464 -700 545 210 210 23 chr2 73212429 73212605 -177475249 - MER63A DNA MER1_type 0 210 2 318 263 53 11 chr2 73213325 73213420 -177474434 + MIR3 SINE MIR 93 191 -17 26 0 0 0 chr2 73213450 73213476 -177474378 + AT_rich Low_complexity Low_complexity 1 26 0 1669 189 20 0 chr2 73213824 73214120 -177473734 + AluJb SINE Alu 1 302 -10 24 67 0 0 chr2 73214226 73214271 -177473583 + AT_rich Low_complexity Low_complexity 1 45 0 577 281 140 0 chr2 73214398 73214576 -177473278 + MIR SINE MIR 53 255 -7 1479 158 0 4 chr2 73214630 73214864 -177472990 - AluJb SINE Alu -79 233 1 249 225 113 0 chr2 73215554 73215634 -177472220 - L1ME LINE L1 -345 5776 5688 1697 145 23 36 chr2 73216157 73216461 -177471393 + AluJb SINE Alu 1 300 -12 1242 137 10 5 chr2 73216729 73216934 -177470920 + MER2 DNA MER2_type 2 207 -138 393 221 0 0 chr2 73216960 73217037 -177470817 + MER2 DNA MER2_type 269 345 0 191 364 23 15 chr2 73217546 73217678 -177470176 + L2 LINE L2 3181 3313 0 701 180 8 23 chr2 73217715 73217843 -177470011 + FLAM_A SINE Alu 1 126 -7 688 135 0 0 chr2 73218187 73218283 -177469571 - FLAM_C SINE Alu -26 117 22 748 139 17 0 chr2 73218480 73218595 -177469259 - AluJb SINE Alu -38 274 158 23 33 0 0 chr2 73219161 73219191 -177468663 + AT_rich Low_complexity Low_complexity 1 30 0 1500 186 0 8 chr2 73219530 73219782 -177468072 - AluJb SINE Alu -62 250 1 216 182 0 0 chr2 73220213 73220257 -177467597 + A-rich Low_complexity Low_complexity 1 44 0 310 334 162 32 chr2 73221016 73221536 -177466318 + L2 LINE L2 2449 3034 -238 21 89 0 0 chr2 73222096 73222152 -177465702 + AT_rich Low_complexity Low_complexity 1 56 0 2293 57 4 11 chr2 73222862 73223142 -177464712 - AluY SINE Alu -13 298 21 389 288 34 8 chr2 73223218 73223336 -177464518 + MIR3 SINE MIR 15 135 -73 372 257 133 0 chr2 73224368 73224473 -177463381 - L2 LINE L2 -4 3309 3191 198 286 229 0 chr2 73224782 73224852 -177463002 + L2 LINE L2 3193 3278 -35 1372 103 5 21 chr2 73224924 73225118 -177462736 - AluSg/x SINE Alu -2 308 118 30 0 0 0 chr2 73226324 73226354 -177461500 + AT_rich Low_complexity Low_complexity 1 30 0 232 241 69 0 chr2 73226797 73226855 -177460999 + MIR SINE MIR 119 180 -82 351 262 97 0 chr2 73227474 73227577 -177460277 + MER119 DNA MER1_type 35 147 -436 * 401 183 231 0 chr2 73227566 73227670 -177460184 + MER119 DNA MER1_type 456 583 0 401 183 231 0 chr2 73228375 73228479 -177459375 - MER119 DNA MER1_type 0 583 456 1161 251 174 16 chr2 73228485 73229162 -177458692 + HAL1 LINE L1 1115 1898 -609 2111 139 0 13 chr2 73229777 73230093 -177457761 - AluSx SINE Alu 0 312 1 378 191 0 0 chr2 73230241 73230309 -177457545 - MER58 DNA MER1_type -1 2419 2352 498 231 35 115 chr2 73230380 73230666 -177457188 + LTR41 LTR ERVL 510 772 -1 534 241 183 27 chr2 73230668 73230849 -177457005 + L1MEc LINE L1 2134 2285 -3861 449 181 0 0 chr2 73230849 73230943 -177456911 + L1PB4 LINE L1 6058 6151 -5 195 42 0 0 chr2 73230943 73230967 -177456887 + (TATG)n Simple_repeat Simple_repeat 4 27 0 534 241 183 27 chr2 73230967 73231046 -177456808 + L1MEc LINE L1 2284 2436 -3710 234 312 101 0 chr2 73231047 73231156 -177456698 - MIR SINE MIR -26 236 117 2219 118 3 0 chr2 73231189 73231486 -177456368 - AluSx SINE Alu -14 298 1 1733 160 13 36 chr2 73231527 73231834 -177456020 + AluJb SINE Alu 11 310 -2 784 156 25 0 chr2 73231867 73231989 -177455865 + FLAM_C SINE Alu 1 125 -8 1966 121 10 10 chr2 73232204 73232501 -177455353 + AluSx SINE Alu 1 297 -15 373 207 119 139 chr2 73234600 73234953 -177452901 - L1ME2 LINE L1 -134 6030 5685 242 189 129 121 chr2 73234967 73235099 -177452755 - L1ME2 LINE L1 -474 5647 5515 1964 94 37 27 chr2 73236622 73236919 -177450935 - AluSx SINE Alu -12 300 1 23 0 0 0 chr2 73236929 73236952 -177450902 + AT_rich Low_complexity Low_complexity 1 23 0 923 214 97 97 chr2 73238089 73238331 -177449523 - L1ME4a LINE L1 -5 6116 5875 2360 79 0 20 chr2 73238331 73238636 -177449218 - AluY SINE Alu -6 305 7 923 214 97 97 chr2 73238636 73238900 -177448954 - L1ME4a LINE L1 -246 5875 5607 2228 126 0 0 chr2 73238900 73239201 -177448653 - AluSx SINE Alu -11 301 1 923 214 97 97 chr2 73239201 73239262 -177448592 - L1ME4a LINE L1 -513 5608 5548 28 48 0 0 chr2 73239284 73239326 -177448528 + AT_rich Low_complexity Low_complexity 1 42 0 1031 153 6 6 chr2 73239326 73239489 -177448365 - FRAM SINE Alu -3 163 1 512 319 104 34 chr2 73239511 73240010 -177447844 - L1M4 LINE L1 -3440 2706 2173 237 268 0 0 chr2 73240144 73240200 -177447654 + (TA)n Simple_repeat Simple_repeat 1 56 0 254 155 52 31 chr2 73240314 73240411 -177447443 + (TATAA)n Simple_repeat Simple_repeat 3 101 0 2603 162 55 73 chr2 73240483 73241046 -177446808 - L1MB4 LINE L1 -1 6179 5630 1840 141 27 14 chr2 73241046 73241343 -177446511 - AluJb SINE Alu -11 301 1 2603 162 55 73 chr2 73241343 73241489 -177446365 - L1MB4 LINE L1 -550 5630 5483 1974 107 67 0 chr2 73241674 73241944 -177445910 + AluSx SINE Alu 5 292 -20 2228 125 3 3 chr2 73243324 73243636 -177444218 - AluSx SINE Alu 0 312 1 815 239 67 34 chr2 73243699 73243938 -177443916 + MIR SINE MIR 16 262 0 277 297 0 14 chr2 73245629 73245703 -177442151 - MER5A DNA MER1_type -60 129 57 379 261 80 57 chr2 73245904 73246080 -177441774 + MIR SINE MIR 82 261 -1 929 234 19 5 chr2 73247602 73247807 -177440047 - MER3 DNA MER1_type -1 208 1 380 192 95 121 chr2 73248185 73248202 -177439652 + MLT1G3 LTR MaLR 79 95 -495 711 213 152 97 chr2 73248202 73248627 -177439227 + MLT2B1 LTR ERVL 1 458 -62 459 0 0 0 chr2 73248627 73248678 -177439176 + (CA)n Simple_repeat Simple_repeat 1 51 0 711 213 152 97 chr2 73248678 73248745 -177439109 + MLT2B1 LTR ERVL 458 520 0 380 192 95 121 chr2 73248745 73248773 -177439081 + MLT1G3 LTR MaLR 95 122 -468 1997 147 3 13 chr2 73248773 73249087 -177438767 + AluJb SINE Alu 1 311 -1 380 192 95 121 chr2 73249087 73249229 -177438625 + MLT1G3 LTR MaLR 122 278 -312 790 223 15 86 chr2 73249339 73249364 -177438490 + MIR SINE MIR 12 37 -225 2118 128 10 3 chr2 73249364 73249662 -177438192 + AluSx SINE Alu 1 300 -12 189 0 0 0 chr2 73249662 73249683 -177438171 + (GA)n Simple_repeat Simple_repeat 2 22 0 790 223 15 86 chr2 73249683 73249871 -177437983 + MIR SINE MIR 36 206 -56 2390 86 0 7 chr2 73249871 73250172 -177437682 + AluSq SINE Alu 1 299 -14 790 223 15 86 chr2 73250172 73250225 -177437629 + MIR SINE MIR 206 261 -1 736 138 103 0 chr2 73251155 73251300 -177436554 + FAM SINE Alu 1 41 -8 225 318 80 11 chr2 73251686 73251862 -177435992 - L2 LINE L2 -900 2414 2227 2103 119 0 35 chr2 73253033 73253345 -177434509 - AluSx SINE Alu -11 301 1 2001 141 0 3 chr2 73253644 73253935 -177433919 + AluJb SINE Alu 1 290 -22 526 261 77 92 chr2 73254148 73254460 -177433394 - L1ME4a LINE L1 0 6121 5817 2076 142 0 13 chr2 73254460 73254771 -177433083 + AluJo SINE Alu 1 307 -5 526 261 77 92 chr2 73254771 73254937 -177432917 - L1ME4a LINE L1 -304 5817 5650 3367 69 16 0 chr2 73256417 73256849 -177431005 - L1PA13 LINE L1 -8 6155 5717 1442 176 51 12 chr2 73257206 73257542 -177430312 + Charlie1 DNA MER1_type 2413 2761 0 2372 99 0 7 chr2 73257651 73257954 -177429900 - AluSx SINE Alu -11 301 1 2258 115 3 6 chr2 73258200 73258512 -177429342 - AluSx SINE Alu -1 311 1 335 315 137 10 chr2 73258891 73259088 -177428766 + MIR SINE MIR 35 256 -6 2346 105 0 0 chr2 73259116 73259420 -177428434 - AluSx SINE Alu -8 304 1 1957 118 43 16 chr2 73260057 73260361 -177427493 - AluSx SINE Alu 0 312 1 2385 81 0 0 chr2 73260549 73260845 -177427009 - AluSc SINE Alu -13 296 1 1346 220 49 133 chr2 73261526 73261572 -177426282 + LTR9 LTR ERV1 1 49 -563 2130 137 3 7 chr2 73261572 73261879 -177425975 + AluSx SINE Alu 1 306 -6 1346 220 49 133 chr2 73261879 73262500 -177425354 + LTR9 LTR ERV1 49 612 0 223 347 42 58 chr2 73262537 73262727 -177425127 + L2 LINE L2 2925 3111 -161 323 286 159 22 chr2 73263190 73263372 -177424482 + MIR SINE MIR 56 262 0 5232 118 14 14 chr2 73263665 73264444 -177423410 + LTR19C LTR ERV1 1 779 0 7974 230 20 22 chr2 73264476 73266821 -177421033 + HUERS-P3 LTR ERV1 33 2361 -4635 * 13074 167 34 41 chr2 73266811 73268494 -177419360 + HUERS-P3 LTR ERV1 2637 4330 -2666 1705 68 0 10 chr2 73268494 73268699 -177419155 + AluY SINE Alu 83 285 -26 705 24 0 0 chr2 73268699 73268782 -177419072 + (CATAA)n Simple_repeat Simple_repeat 2 84 0 13074 167 34 41 chr2 73268782 73270013 -177417841 + HUERS-P3 LTR ERV1 4329 5567 -1429 2322 96 0 0 chr2 73270013 73270304 -177417550 - AluSc SINE Alu -18 291 1 13074 167 34 41 chr2 73270304 73273038 -177414816 + HUERS-P3 LTR ERV1 5567 6995 -1 5266 120 14 10 chr2 73273042 73273818 -177414036 + LTR19C LTR ERV1 1 779 0 393 236 22 93 chr2 73273954 73274136 -177413718 + MIR SINE MIR 44 212 -50 260 183 0 17 chr2 73274357 73274417 -177413437 + CT-rich Low_complexity Low_complexity 2 60 0 2662 43 0 3 chr2 73274417 73274720 -177413134 - AluY SINE Alu -9 302 1 2072 136 3 0 chr2 73274722 73275017 -177412837 - AluSx SINE Alu -16 296 1 671 306 167 23 chr2 73275281 73275676 -177412178 - L2 LINE L2 -6 3307 2856 1525 192 73 76 chr2 73275727 73276251 -177411603 + L1MC5 LINE L1 7301 7824 -137 2035 138 0 10 chr2 73276251 73276556 -177411298 + AluJb SINE Alu 1 302 -10 1525 192 73 76 chr2 73276556 73276660 -177411194 + L1MC5 LINE L1 7824 7927 -34 21 36 0 0 chr2 73276660 73276688 -177411166 + AT_rich Low_complexity Low_complexity 1 28 0 1324 276 110 41 chr2 73276692 73277475 -177410379 - L2 LINE L2 -474 2840 2004 245 265 239 0 chr2 73277499 73277616 -177410238 + MIR SINE MIR 8 152 -110 261 0 0 0 chr2 73277696 73277725 -177410129 + (CAT)n Simple_repeat Simple_repeat 1 29 0 2149 184 23 21 chr2 73278207 73278642 -177409212 + MLT1C LTR MaLR 2 437 -30 1364 169 31 92 chr2 73279289 73279680 -177408174 + L1ME2 LINE L1 5789 6155 -9 2269 96 7 3 chr2 73279762 73280065 -177407789 + AluSg SINE Alu 1 304 -6 205 343 10 10 chr2 73280406 73280508 -177407346 + L3b LINE CR1 1163 1264 -319 916 114 0 8 chr2 73280622 73280754 -177407100 + FLAM_C SINE Alu 1 131 -2 217 316 31 10 chr2 73280776 73280874 -177406980 + L3b LINE CR1 1296 1395 -188 192 135 0 0 chr2 73282170 73282207 -177405647 + (TG)n Simple_repeat Simple_repeat 2 38 0 1092 127 0 0 chr2 73282515 73282672 -177405182 - FRAM SINE Alu -10 166 10 350 189 178 77 chr2 73282710 73282781 -177405073 + MER5A DNA MER1_type 4 66 -123 2209 128 0 3 chr2 73282781 73283086 -177404768 + AluSx SINE Alu 1 304 -8 350 189 178 77 chr2 73283086 73283183 -177404671 + MER5A DNA MER1_type 66 189 0 208 276 110 55 chr2 73283847 73283974 -177403880 - L2 LINE L2 0 3313 3180 26 0 0 0 chr2 73283982 73284008 -177403846 + AT_rich Low_complexity Low_complexity 1 26 0 2181 129 0 31 chr2 73284143 73284461 -177403393 - AluSx SINE Alu -4 308 1 2603 68 3 0 chr2 73284473 73284783 -177403071 - AluSp SINE Alu -2 311 1 21 0 0 0 chr2 73284954 73284975 -177402879 + AT_rich Low_complexity Low_complexity 1 21 0 1414 213 96 10 chr2 73285095 73285409 -177402445 + MER58B DNA MER1_type 1 341 0 556 306 97 0 chr2 73285457 73285663 -177402191 - L2 LINE L2 -252 3061 2836 300 254 42 0 chr2 73285703 73285774 -177402080 + MER21B LTR ERV1 15 88 -775 2272 202 42 52 chr2 73285840 73286413 -177401441 + MER21B LTR ERV1 100 666 -197 814 106 9 9 chr2 73286413 73286526 -177401328 - MER30 DNA MER1_type 0 230 118 180 0 0 0 chr2 73286627 73286647 -177401207 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 209 290 0 16 chr2 73288575 73288637 -177399217 + MIR SINE MIR 15 75 -187 1735 165 3 31 chr2 73288667 73289020 -177398834 + AluJb SINE Alu 1 344 0 1087 139 10 21 chr2 73289020 73289214 -177398640 + AluJo SINE Alu 118 309 -3 659 171 47 16 chr2 73289321 73289450 -177398404 + FLAM_C SINE Alu 1 133 0 1027 223 15 0 chr2 73289666 73289872 -177397982 + LTR16A1 LTR ERVL 247 455 -2 22 0 0 0 chr2 73289873 73289895 -177397959 + AT_rich Low_complexity Low_complexity 1 22 0 1677 126 20 61 chr2 73289935 73290229 -177397625 + AluJo SINE Alu 1 282 -30 1212 248 99 26 chr2 73290235 73290658 -177397196 + HAL1 LINE L1 59 512 -1995 2086 243 77 21 chr2 73290658 73291177 -177396677 - MLT1H1 LTR MaLR 0 555 8 702 253 110 48 chr2 73291202 73291494 -177396360 + HAL1 LINE L1 517 826 -1681 733 124 5 156 chr2 73291494 73291712 -177396142 - MER53 DNA DNA 0 189 5 299 260 51 45 chr2 73291714 73291891 -177395963 + HAL1 LINE L1 823 1000 -1507 841 184 68 0 chr2 73291896 73292043 -177395811 + FAM SINE Alu 1 157 -28 598 240 6 6 chr2 73292068 73292251 -177395603 + HAL1 LINE L1 1032 1214 -1293 1616 227 43 50 chr2 73292257 73292556 -177395298 + HAL1 LINE L1 1259 1556 -951 1939 148 0 3 chr2 73292556 73292868 -177394986 + AluSx SINE Alu 1 311 0 1616 227 43 50 chr2 73292868 73293051 -177394803 + HAL1 LINE L1 1556 1739 -768 366 185 17 92 chr2 73293164 73293283 -177394571 - MIR SINE MIR -4 258 149 642 272 102 102 chr2 73293362 73293953 -177393901 + MLT1G1 LTR MaLR 5 595 0 2208 224 47 28 chr2 73294080 73294611 -177393243 - MER87 LTR ERV1 0 541 1 296 125 0 0 chr2 73294879 73294919 -177392935 - Alu SINE Alu -259 41 2 389 221 23 12 chr2 73294920 73295006 -177392848 - MER87 LTR ERV1 -73 468 382 1270 26 13 0 chr2 73295116 73295270 -177392584 + L1PA4 LINE L1 6000 6155 0 1073 253 73 21 chr2 73295271 73295560 -177392294 - MLT1A1 LTR MaLR -61 304 1 853 199 33 0 chr2 73295704 73295855 -177391999 + MER45A DNA AcHobo 7 162 -16 424 228 110 22 chr2 73296472 73296608 -177391246 - MER103 DNA DNA -1 165 18 202 317 0 0 chr2 73296862 73296922 -177390932 + L2 LINE L2 3213 3272 0 180 283 100 0 chr2 73296933 73296993 -177390861 + MIR3 SINE MIR 112 177 -31 223 336 29 29 chr2 73297150 73297254 -177390600 - L2 LINE L2 -234 3038 2935 2415 91 3 0 chr2 73297455 73297764 -177390090 + AluSx SINE Alu 3 312 0 366 107 0 0 chr2 73298026 73298082 -177389772 + (TG)n Simple_repeat Simple_repeat 1 56 0 2140 116 31 0 chr2 73298223 73298516 -177389338 + AluSx SINE Alu 1 302 -10 2366 109 0 0 chr2 73299099 73299411 -177388443 + AluSx SINE Alu 1 312 0 2912 240 104 70 chr2 73299521 73300250 -177387604 + L1MC5 LINE L1 5768 6471 -1490 1878 181 13 0 chr2 73300250 73300554 -177387300 + AluJo SINE Alu 1 308 -4 2912 240 104 70 chr2 73300554 73301843 -177386011 + L1MC5 LINE L1 6471 7842 -119 375 153 0 0 chr2 73301845 73301904 -177385950 + AluS SINE Alu 2 60 -248 600 266 127 90 chr2 73301931 73302117 -177385737 - L3 LINE CR1 -17 1560 1382 1870 151 3 17 chr2 73302117 73302416 -177385438 - AluSx SINE Alu -17 295 1 600 266 127 90 chr2 73302416 73302771 -177385083 - L3 LINE CR1 -195 1382 999 1589 188 8 106 chr2 73302803 73302883 -177384971 - MER63B DNA MER1_type -656 404 318 1710 168 3 14 chr2 73302883 73303168 -177384686 + AluJo SINE Alu 2 283 -29 2025 101 48 0 chr2 73303168 73303466 -177384388 + AluSg SINE Alu 1 311 0 1589 188 8 106 chr2 73303466 73303839 -177384015 - MER63B DNA MER1_type -740 320 1 1264 332 155 29 chr2 73303840 73304692 -177383162 - L3 LINE CR1 -583 994 36 1349 158 13 22 chr2 73304922 73305150 -177382704 - AluJb SINE Alu 0 312 87 223 344 21 43 chr2 73305746 73305839 -177382015 + MIR SINE MIR 21 111 -97 234 150 0 0 chr2 73306022 73306062 -177381792 + (GGA)n Simple_repeat Simple_repeat 3 42 0 272 274 44 9 chr2 73306669 73306782 -177381072 - L1ME4a LINE L1 -15 6106 5990 12686 160 14 38 chr2 73307297 73307484 -177380370 + L1 LINE L1 2911 3101 -3045 1586 183 0 48 chr2 73307484 73307796 -177380058 + AluJo SINE Alu 1 297 -15 12686 160 14 38 chr2 73307796 73308005 -177379849 + L1 LINE L1 3101 3314 -2832 413 123 0 0 chr2 73308005 73308062 -177379792 + AluS SINE Alu 2 58 -260 1525 135 0 0 chr2 73308062 73308269 -177379585 + AluSg/x SINE Alu 92 298 -14 12686 160 14 38 chr2 73308269 73310308 -177377546 + L1 LINE L1 3312 5343 -803 1129 169 5 11 chr2 73310308 73310492 -177377362 + AluJb SINE Alu 111 293 -19 26 0 0 0 chr2 73310493 73310519 -177377335 + AT_rich Low_complexity Low_complexity 1 26 0 2090 140 0 9 chr2 73310939 73311254 -177376600 + AluJb SINE Alu 1 312 0 610 240 69 46 chr2 73311256 73311473 -177376381 + L1ME LINE L1 5540 5761 -360 915 107 0 175 chr2 73311484 73311690 -177376164 - Tigger1 DNA MER2_type 0 2418 2249 1366 168 86 26 chr2 73311692 73312016 -177375838 - MER39 LTR ERV1 -313 394 1 243 291 0 35 chr2 73312016 73312102 -177375752 + L1ME LINE L1 5745 5827 -294 2146 114 3 0 chr2 73312106 73312395 -177375459 + AluSx SINE Alu 1 290 -22 754 113 84 14 chr2 73312528 73312670 -177375184 + AluSg/x SINE Alu 145 296 -13 844 196 25 0 chr2 73312689 73312847 -177375007 - MER3 DNA MER1_type -80 129 15 21 0 0 0 chr2 73313010 73313031 -177374823 + AT_rich Low_complexity Low_complexity 1 21 0 1364 149 16 112 chr2 73313210 73313358 -177374496 + AluJo SINE Alu 1 103 -209 2273 94 0 0 chr2 73313358 73313646 -177374208 + AluSx SINE Alu 1 288 -24 1364 149 16 112 chr2 73313646 73313819 -177374035 + AluJo SINE Alu 103 291 -21 1070 298 160 45 chr2 73313962 73315052 -177372802 + L2 LINE L2 1955 3194 -78 1757 192 126 36 chr2 73315148 73315617 -177372237 + MER74A LTR ERVL 15 525 -33 1563 198 106 30 chr2 73315617 73315985 -177371869 + MSTD LTR MaLR 1 396 0 201 253 53 27 chr2 73316047 73316122 -177371732 - MIR SINE MIR -75 187 111 2805 181 81 5 chr2 73316190 73316819 -177371035 - L1MA9 LINE L1 -31 6281 5605 508 158 25 67 chr2 73316808 73316928 -177370926 + L1MD2 LINE L1 3824 3938 -2208 * 2895 177 64 56 chr2 73316956 73317052 -177370802 + L1MD2 LINE L1 4964 5058 -1301 2413 151 3 22 chr2 73317052 73317423 -177370431 - MLT1A1 LTR MaLR -1 364 1 2895 177 64 56 chr2 73317423 73317647 -177370207 + L1MD2 LINE L1 5058 5279 -1080 1504 163 78 34 chr2 73317647 73317941 -177369913 + AluJo SINE Alu 1 307 -5 2895 177 64 56 chr2 73317941 73318537 -177369317 + L1MD2 LINE L1 5279 5906 -453 1427 161 0 0 chr2 73318539 73318757 -177369097 + AluSx SINE Alu 1 218 -94 473 259 61 0 chr2 73318781 73318912 -177368942 + L1MD2 LINE L1 5894 6032 -327 406 246 7 80 chr2 73319092 73319192 -177368662 + L2 LINE L2 1855 1944 -1370 2333 148 6 12 chr2 73319192 73319531 -177368323 - MER1B DNA MER1_type 0 337 1 406 246 7 80 chr2 73319531 73319568 -177368286 + L2 LINE L2 1944 1982 -1332 708 246 48 6 chr2 73319569 73319736 -177368118 - MLT1D LTR MaLR -1 504 331 873 217 45 57 chr2 73319765 73320009 -177367845 - MLT1D LTR MaLR -264 241 1 2328 88 3 10 chr2 73320227 73320533 -177367321 - AluY SINE Alu -3 308 5 792 192 80 13 chr2 73320955 73321106 -177366748 - MER45A DNA AcHobo -17 161 1 251 320 19 0 chr2 73321284 73321387 -177366467 + L2 LINE L2 2682 2786 -528 194 281 73 0 chr2 73321547 73321629 -177366225 + MIR SINE MIR 175 262 0 319 332 52 82 chr2 73321634 73321866 -177365988 + L2 LINE L2 3035 3259 -13 2388 58 44 0 chr2 73321922 73322217 -177365637 - AluY SINE Alu -1 310 3 180 111 0 0 chr2 73322268 73322295 -177365559 + (GGAGAA)n Simple_repeat Simple_repeat 1 27 0 1346 107 0 0 chr2 73322425 73322602 -177365252 - AluSg/x SINE Alu -1 309 133 4878 83 25 2 chr2 73322985 73323612 -177364242 + L1PA10 LINE L1 5523 6164 -4 183 42 0 0 chr2 73323728 73323752 -177364102 + (TTG)n Simple_repeat Simple_repeat 2 25 0 195 42 0 0 chr2 73324320 73324344 -177363510 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2161 73 10 41 chr2 73324913 73325227 -177362627 - AluSg SINE Alu -6 304 1 259 243 29 58 chr2 73325615 73325718 -177362136 + MIR SINE MIR 129 228 -34 2104 88 9 64 chr2 73325780 73326109 -177361745 - AluY SINE Alu 0 311 1 885 159 0 0 chr2 73326224 73326356 -177361498 - FLAM_C SINE Alu -1 132 1 223 191 0 21 chr2 73326730 73326777 -177361077 + GA-rich Low_complexity Low_complexity 1 46 0 2315 111 0 3 chr2 73326916 73327223 -177360631 - AluSq SINE Alu -7 306 1 340 328 72 48 chr2 73327824 73328361 -177359493 - L2 LINE L2 -173 3099 2550 314 252 30 22 chr2 73328575 73328710 -177359144 + GA-rich Low_complexity Low_complexity 2 137 0 2201 111 0 7 chr2 73329672 73329979 -177357875 - AluSx SINE Alu -7 305 1 1330 204 12 0 chr2 73329982 73330232 -177357622 - AluJo SINE Alu -15 297 45 737 207 0 15 chr2 73330236 73330371 -177357483 - FLAM_A SINE Alu 0 133 1 466 106 0 0 chr2 73330388 73330454 -177357400 - MADE1 DNA Mariner 0 80 15 321 348 52 70 chr2 73330988 73331144 -177356710 - L2 LINE L2 -18 3254 3097 2306 111 3 0 chr2 73331144 73331450 -177356404 + AluSc SINE Alu 1 307 -2 321 348 52 70 chr2 73331450 73331621 -177356233 - L2 LINE L2 -175 3097 2933 1873 134 14 21 chr2 73331783 73332074 -177355780 + AluJo SINE Alu 1 289 -23 417 75 15 75 chr2 73332436 73332569 -177355285 + (TCC)n Simple_repeat Simple_repeat 3 127 0 477 182 0 0 chr2 73332581 73332729 -177355125 + (CTG)n Simple_repeat Simple_repeat 1 148 0 588 201 6 0 chr2 73332741 73333098 -177354756 + (CTG)n Simple_repeat Simple_repeat 1 359 0 276 234 26 26 chr2 73333099 73333176 -177354678 + CT-rich Low_complexity Low_complexity 3 79 0 985 171 0 18 chr2 73333182 73333352 -177354502 - FRAM SINE Alu -2 174 8 352 212 106 23 chr2 73335113 73335245 -177352609 - L1ME4a LINE L1 -13 6108 5966 492 281 127 56 chr2 73335261 73335795 -177352059 - L1ME4a LINE L1 -202 5919 5348 304 150 25 0 chr2 73336066 73336146 -177351708 + (TA)n Simple_repeat Simple_repeat 2 83 0 508 223 23 108 chr2 73336147 73336271 -177351583 - L1MC4a LINE L1 -301 5820 5853 2140 127 3 3 chr2 73336271 73336579 -177351275 - AluSx SINE Alu -4 308 1 508 223 23 108 chr2 73336579 73336769 -177351085 - L1MC4a LINE L1 -267 5854 5649 2292 104 3 16 chr2 73336806 73336978 -177350876 - AluSx SINE Alu -7 305 137 2402 102 0 0 chr2 73336978 73337281 -177350573 - AluY SINE Alu -8 303 1 2292 104 3 16 chr2 73337281 73337417 -177350437 - AluSx SINE Alu -175 137 1 241 276 79 26 chr2 73337514 73337590 -177350264 - MIR SINE MIR -66 196 117 1814 259 132 42 chr2 73338242 73338766 -177349088 + L2 LINE L2 2111 2586 -727 1918 154 0 0 chr2 73338766 73339052 -177348802 + AluSx SINE Alu 1 286 -26 1814 259 132 42 chr2 73339052 73339455 -177348399 + L2 LINE L2 2586 3135 -178 3503 149 34 28 chr2 73339460 73339914 -177347940 - L1MB7 LINE L1 -20 6164 5703 2355 112 0 0 chr2 73339914 73340219 -177347635 + AluSx SINE Alu 1 305 -7 3503 149 34 28 chr2 73340219 73340413 -177347441 - L1MB7 LINE L1 -481 5703 5512 460 272 94 11 chr2 73340428 73340619 -177347235 + L2 LINE L2 3107 3313 0 1537 151 23 15 chr2 73341211 73341470 -177346384 - AluJo SINE Alu -51 261 1 471 248 0 9 chr2 73342944 73343049 -177344805 + U13 snRNA snRNA 1 104 0 524 261 151 10 chr2 73343431 73343630 -177344224 + MIR SINE MIR 28 254 -8 2524 66 0 0 chr2 73343922 73344223 -177343631 + AluSq SINE Alu 1 301 -12 1999 125 7 0 chr2 73349588 73349867 -177337987 - AluSx SINE Alu -4 308 28 856 157 0 22 chr2 73350091 73350225 -177337629 - FLAM_C SINE Alu -2 131 1 406 0 0 0 chr2 73350233 73350278 -177337576 + (TTTTG)n Simple_repeat Simple_repeat 2 160 0 1856 101 89 0 chr2 73350278 73350535 -177337319 - AluSc SINE Alu -29 280 1 191 350 41 0 chr2 73351240 73351337 -177336517 - MIR SINE MIR -106 156 56 274 289 12 0 chr2 73352333 73352416 -177335438 + (TA)n Simple_repeat Simple_repeat 2 85 0 293 170 0 0 chr2 73352632 73352679 -177335175 + MER5B DNA MER1_type 2 48 -130 22 35 0 0 chr2 73352684 73352713 -177335141 + AT_rich Low_complexity Low_complexity 1 29 0 388 231 109 0 chr2 73352792 73352818 -177335036 - L1MC5 LINE L1 -36 7925 7903 2397 97 0 0 chr2 73352818 73353117 -177334737 + AluSx SINE Alu 1 299 -13 388 231 109 0 chr2 73353117 73353237 -177334617 - L1MC5 LINE L1 -58 7903 7763 210 111 0 74 chr2 73353260 73353314 -177334540 + (CAAAAA)n Simple_repeat Simple_repeat 1 50 0 578 200 32 8 chr2 73353388 73353513 -177334341 - MER5B DNA MER1_type -50 128 1 189 0 0 0 chr2 73353802 73353823 -177334031 + (TG)n Simple_repeat Simple_repeat 1 21 0 27 0 0 0 chr2 73354141 73354168 -177333686 + AT_rich Low_complexity Low_complexity 1 27 0 280 86 0 0 chr2 73354916 73354951 -177332903 + U2 snRNA snRNA 1 35 -153 186 43 0 0 chr2 73355466 73355489 -177332365 + (TG)n Simple_repeat Simple_repeat 1 23 0 231 266 80 9 chr2 73355517 73355630 -177332224 - L1ME4a LINE L1 -34 6087 5967 639 242 199 10 chr2 73355644 73356045 -177331809 - L1ME4a LINE L1 -22 6099 5623 383 250 48 18 chr2 73356185 73356353 -177331501 - L1ME4a LINE L1 -2379 5429 5257 293 234 51 57 chr2 73356716 73356874 -177330980 - L1ME4a LINE L1 -1602 4544 4388 1370 161 120 8 chr2 73358806 73359073 -177328781 + AluJb SINE Alu 2 298 -14 2188 121 3 0 chr2 73359116 73359413 -177328441 - AluSx SINE Alu -14 298 1 725 298 49 30 chr2 73359966 73360493 -177327361 - L1M4 LINE L1 -1232 4914 4378 663 249 39 10 chr2 73361026 73361231 -177326623 - MIR SINE MIR 0 262 52 3584 88 25 4 chr2 73361260 73361780 -177326074 - L1MA2 LINE L1 0 6304 5774 23 0 0 0 chr2 73361839 73361862 -177325992 + AT_rich Low_complexity Low_complexity 1 23 0 243 103 0 0 chr2 73362433 73362472 -177325382 + (TG)n Simple_repeat Simple_repeat 2 40 0 22 35 0 0 chr2 73363095 73363124 -177324730 + AT_rich Low_complexity Low_complexity 1 29 0 2282 103 0 3 chr2 73363149 73363451 -177324403 + AluSq SINE Alu 13 313 0 187 265 20 0 chr2 73364269 73364318 -177323536 - L2 LINE L2 -4 3268 3219 973 248 53 13 chr2 73364818 73365121 -177322733 - L1MC4a LINE L1 -1802 6006 5692 486 191 0 0 chr2 73365134 73365218 -177322636 - Tigger5 DNA MER2_type -3 2320 2237 295 216 0 0 chr2 73365229 73365280 -177322574 - Tigger5 DNA MER2_type -2269 54 4 478 299 197 35 chr2 73365746 73366631 -177321223 + L2 LINE L2 2240 3246 -26 2256 114 3 0 chr2 73367835 73368134 -177319720 - AluSx SINE Alu -12 300 1 944 124 23 0 chr2 73368135 73368264 -177319590 - AluSq/x SINE Alu -177 135 4 26 0 0 0 chr2 73370367 73370393 -177317461 + AT_rich Low_complexity Low_complexity 1 26 0 207 0 0 0 chr2 73372084 73372107 -177315747 + (CA)n Simple_repeat Simple_repeat 2 24 0 277 272 48 0 chr2 73373860 73373963 -177313891 - L2 LINE L2 0 3313 3206 306 325 32 7 chr2 73374641 73374795 -177313059 - MIR SINE MIR -77 185 28 845 161 20 0 chr2 73375335 73375484 -177312370 + FRAM SINE Alu 20 171 -5 329 71 0 0 chr2 73375491 73375533 -177312321 + L1PA16 LINE L1 6116 6157 -9 22 0 0 0 chr2 73375533 73375555 -177312299 + AT_rich Low_complexity Low_complexity 1 22 0 437 329 59 17 chr2 73376541 73376778 -177311076 + MIR SINE MIR 15 261 -1 1166 158 5 5 chr2 73378272 73378475 -177309379 + AluJo SINE Alu 87 289 -23 411 113 0 0 chr2 73379465 73379527 -177308327 + (TGAA)n Simple_repeat Simple_repeat 4 65 0 2340 107 0 0 chr2 73380036 73380336 -177307518 - AluSx SINE Alu -12 300 1 359 218 105 30 chr2 73380585 73380718 -177307136 - L1ME3A LINE L1 -219 5951 5809 280 145 0 105 chr2 73380730 73380780 -177307074 + L1ME LINE L1 5713 5754 -367 2100 121 0 10 chr2 73380780 73381123 -177306731 + AluSx SINE Alu 1 312 0 280 145 0 105 chr2 73381123 73381148 -177306706 + L1ME LINE L1 5754 5780 -341 245 158 70 0 chr2 73381191 73381248 -177306606 + GA-rich Low_complexity Low_complexity 4 64 0 2464 71 0 3 chr2 73381366 73381663 -177306191 + AluSc SINE Alu 3 298 -11 345 24 0 0 chr2 73381663 73381705 -177306149 + (TG)n Simple_repeat Simple_repeat 2 43 0 387 177 0 24 chr2 73381705 73381829 -177306025 + (TA)n Simple_repeat Simple_repeat 1 121 0 390 302 74 13 chr2 73382307 73382456 -177305398 + MIR SINE MIR 31 188 -74 1620 151 99 3 chr2 73382468 73382854 -177305000 + AluJb SINE Alu 1 413 0 805 141 19 70 chr2 73382889 73383045 -177304809 - MER20 DNA MER1_type -28 191 44 2296 97 3 34 chr2 73383917 73384238 -177303616 - AluSx SINE Alu -1 311 1 464 263 45 0 chr2 73384437 73384570 -177303284 - MER117 DNA MER1_type -36 161 23 2603 189 126 46 chr2 73385724 73385865 -177301989 + L1MC4 LINE L1 6389 6517 -1525 441 194 29 19 chr2 73385865 73385968 -177301886 + U13 snRNA snRNA 1 104 0 2603 189 126 46 chr2 73385968 73386541 -177301313 + L1MC4 LINE L1 6517 7160 -882 595 183 35 0 chr2 73386542 73386761 -177301093 + FLAM_A SINE Alu 21 243 0 1918 205 81 23 chr2 73386762 73387241 -177300613 + L1MC4 LINE L1 7141 7647 -395 2260 68 14 0 chr2 73439028 73439321 -177248533 - AluSq SINE Alu -16 297 1 296 197 16 0 chr2 73439397 73439458 -177248396 - MIR SINE MIR -64 144 83 1757 140 18 0 chr2 73439469 73439754 -177248100 + AluJb SINE Alu 1 290 -22 266 224 65 75 chr2 73441171 73441278 -177246576 + L2 LINE L2 3208 3313 0 189 0 0 0 chr2 73441540 73441561 -177246293 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 615 270 50 59 chr2 73442160 73442501 -177245353 - L1MC4a LINE L1 -1763 6045 5708 208 322 81 0 chr2 73442502 73442589 -177245265 + MIR SINE MIR 23 116 -146 1276 126 0 0 chr2 73442601 73442804 -177245050 - AluSq SINE Alu 0 302 100 711 67 0 0 chr2 73442804 73442894 -177244960 + AluSg/x SINE Alu 209 298 -14 207 342 13 0 chr2 73442951 73443030 -177244824 - L3 LINE CR1 -286 1291 1212 2372 74 0 0 chr2 73443051 73443350 -177244504 - AluSc SINE Alu -10 299 1 188 283 66 66 chr2 73443368 73443520 -177244334 - L3b LINE CR1 -316 1267 1116 736 158 0 16 chr2 73443560 73443687 -177244167 + FLAM_C SINE Alu 18 142 -1 1116 141 20 15 chr2 73443763 73443962 -177243892 + L1MB3 LINE L1 5944 6143 -40 2466 49 0 7 chr2 73443962 73444268 -177243586 + AluY SINE Alu 1 304 -7 1967 89 27 20 chr2 73444284 73444576 -177243278 + AluSq SINE Alu 5 298 -15 2337 68 0 0 chr2 73444621 73444915 -177242939 + AluY SINE Alu 1 294 -17 973 208 140 5 chr2 73444954 73445161 -177242693 + MER45C DNA AcHobo 719 953 0 2137 97 6 6 chr2 73445565 73445876 -177241978 - AluSp SINE Alu 0 313 3 21 36 0 0 chr2 73445898 73445926 -177241928 + AT_rich Low_complexity Low_complexity 1 28 0 641 179 0 65 chr2 73445933 73446056 -177241798 + FLAM_A SINE Alu 12 126 -16 1316 157 45 21 chr2 73446057 73446344 -177241510 - L1MA4 LINE L1 -10 6290 5997 1157 99 6 0 chr2 73446354 73446515 -177241339 - AluSq SINE Alu -18 295 134 2221 95 3 0 chr2 73446515 73446821 -177241033 - AluSg SINE Alu -3 307 1 548 239 60 107 chr2 73446856 73447164 -177240690 - L1MEd LINE L1 -5107 1012 691 2009 115 27 0 chr2 73447164 73447459 -177240395 - AluSx SINE Alu -9 303 1 548 239 60 107 chr2 73447459 73447495 -177240359 - L1MEd LINE L1 -5428 691 655 2114 100 4 0 chr2 73447495 73447804 -177240050 - AluSc SINE Alu 0 310 1 548 239 60 107 chr2 73447804 73447876 -177239978 - L1MEd LINE L1 -5464 655 614 590 276 61 27 chr2 73447876 73448173 -177239681 + L1ME LINE L1 5255 5561 -603 1926 126 0 27 chr2 73448178 73448479 -177239375 - AluSx SINE Alu -19 293 1 207 0 0 0 chr2 73448490 73448513 -177239341 + (T)n Simple_repeat Simple_repeat 1 23 0 797 157 9 114 chr2 73448804 73448950 -177238904 - L1MB4 LINE L1 -179 6001 5882 1824 126 13 13 chr2 73448950 73449259 -177238595 - AluJb SINE Alu -3 309 1 797 157 9 114 chr2 73449259 73449322 -177238532 - L1MB4 LINE L1 -298 5882 5814 1250 140 44 9 chr2 73449323 73449552 -177238302 - L1MB3 LINE L1 -3 6180 5944 783 170 0 15 chr2 73449636 73449771 -177238083 - FLAM_C SINE Alu 0 133 1 204 296 20 61 chr2 73449813 73449911 -177237943 + L3b LINE CR1 1116 1209 -374 215 291 25 13 chr2 73450015 73450094 -177237760 + L3 LINE CR1 1212 1291 -286 2030 103 28 3 chr2 73450150 73450441 -177237413 - AluSx SINE Alu -14 298 1 942 169 7 0 chr2 73450464 73450618 -177237236 + AluJb SINE Alu 137 291 -21 287 261 130 9 chr2 73450618 73450733 -177237121 - MER33 DNA MER1_type -195 129 1 695 251 158 9 chr2 73450733 73450948 -177236906 + MIR SINE MIR 16 262 0 303 310 103 14 chr2 73451052 73451197 -177236657 + L1ME LINE L1 5191 5348 -798 1335 97 0 28 chr2 73451629 73451664 -177236190 + AluSg/x SINE Alu 103 137 -175 2414 96 3 0 chr2 73451664 73451976 -177235878 + AluSp SINE Alu 1 313 0 1335 97 0 28 chr2 73451976 73452116 -177235738 + AluSg/x SINE Alu 137 273 -39 2044 134 6 13 chr2 73452157 73452471 -177235383 - AluSx SINE Alu 0 312 1 499 307 94 53 chr2 73452471 73452907 -177234947 + L1ME LINE L1 4372 4825 -1321 292 311 74 0 chr2 73453011 73453159 -177234695 + MER117 DNA MER1_type 3 161 -36 438 316 39 73 chr2 73453200 73453523 -177234331 + L1ME LINE L1 4903 5211 -935 497 275 68 8 chr2 73453545 73453781 -177234073 + L1ME LINE L1 5267 5516 -605 1053 83 83 0 chr2 73454321 73454478 -177233376 + AluSc SINE Alu 124 293 -16 366 259 95 54 chr2 73454595 73454742 -177233112 + L1ME LINE L1 5415 5567 -554 379 177 38 0 chr2 73454748 73454827 -177233027 + Charlie1 DNA MER1_type 2 83 -2678 1860 98 11 81 chr2 73455476 73455761 -177232093 + AluSx SINE Alu 1 265 -47 644 185 0 0 chr2 73455861 73455969 -177231885 - HERVL18 LTR ERVL -5938 109 2 459 180 72 27 chr2 73455977 73456088 -177231766 - LTR18B LTR ERVL -13 601 486 539 237 6 108 chr2 73456113 73456270 -177231584 - LTR18A LTR ERVL -244 113 2 2352 116 61 0 chr2 73456270 73456632 -177231222 + L1PA16 LINE L1 5783 6166 0 234 0 0 0 chr2 73456679 73456705 -177231149 + (TTG)n Simple_repeat Simple_repeat 2 27 0 714 188 23 0 chr2 73456708 73456836 -177231018 - FLAM_C SINE Alu -2 131 1 2868 13 0 0 chr2 73457140 73457447 -177230407 - AluY SINE Alu -4 307 1 1908 156 0 42 chr2 73457722 73458030 -177229824 + AluJb SINE Alu 1 295 -17 346 110 0 174 chr2 73458037 73458146 -177229708 + MER53 DNA DNA 93 182 -7 283 157 57 14 chr2 73458086 73458156 -177229698 - MER53 DNA DNA -110 79 7 * 357 159 37 75 chr2 73458315 73458422 -177229432 - LTR41 LTR ERVL -592 181 79 316 281 174 48 chr2 73458497 73458693 -177229161 + L2 LINE L2 3006 3247 -66 2408 104 0 0 chr2 73458693 73459001 -177228853 - AluSx SINE Alu -4 308 1 316 281 174 48 chr2 73459001 73459074 -177228780 + L2 LINE L2 3247 3309 -4 235 68 169 34 chr2 73459289 73459348 -177228506 + Looper DNA T2_type 1251 1317 -241 2223 101 3 14 chr2 73459463 73459759 -177228095 - AluSx SINE Alu -19 293 1 369 259 126 23 chr2 73459764 73459938 -177227916 - L2 LINE L2 -963 2351 2160 2057 151 0 7 chr2 73459973 73460277 -177227577 + AluJo SINE Alu 1 302 -10 510 272 80 19 chr2 73460590 73460752 -177227102 - MIR3 SINE MIR -28 180 9 713 260 75 0 chr2 73461191 73461364 -177226490 + MIR SINE MIR 8 193 -69 317 243 81 29 chr2 73461428 73461564 -177226290 - MER112 DNA MER1_type -104 156 14 221 231 0 19 chr2 73461573 73461625 -177226229 + MIR SINE MIR 195 245 -17 274 301 140 17 chr2 73462335 73462421 -177225433 + MIR SINE MIR 38 112 -150 189 0 0 0 chr2 73462421 73462442 -177225412 + (GA)n Simple_repeat Simple_repeat 2 22 0 274 301 140 17 chr2 73462442 73462543 -177225311 + MIR SINE MIR 112 250 -12 220 282 115 0 chr2 73466646 73466724 -177221130 + MER5A DNA MER1_type 18 104 -85 349 299 247 0 chr2 73467121 73467295 -177220559 + MIR SINE MIR 20 236 -26 1903 143 10 41 chr2 73467649 73467963 -177219891 + AluJb SINE Alu 1 304 -8 363 272 33 0 chr2 73468400 73468492 -177219362 + L2 LINE L2 3215 3309 -4 1334 129 89 32 chr2 73468733 73468891 -177218963 - AluSx SINE Alu -1 311 133 2450 75 3 0 chr2 73468891 73469184 -177218670 - AluSp SINE Alu -19 294 1 1334 129 89 32 chr2 73469184 73469273 -177218581 - AluSx SINE Alu -179 133 50 1714 118 0 4 chr2 73469273 73469511 -177218343 - AluSx SINE Alu -75 237 1 2009 116 3 50 chr2 73469511 73469681 -177218173 - AluJb SINE Alu -9 303 153 2527 74 0 0 chr2 73469681 73469979 -177217875 - AluSq SINE Alu -15 298 1 2009 116 3 50 chr2 73469979 73470126 -177217728 - AluJb SINE Alu -159 153 1 1999 130 6 25 chr2 73470304 73470620 -177217234 - AluJb SINE Alu -2 310 1 2256 102 0 14 chr2 73471223 73471518 -177216336 - AluSx SINE Alu -16 296 6 2032 141 37 0 chr2 73471529 73471828 -177216026 - AluSx SINE Alu -2 310 1 1306 185 8 88 chr2 73471869 73471964 -177215890 - MER34B LTR ERV1 -5 560 459 1631 159 90 17 chr2 73471964 73472254 -177215600 + AluJb SINE Alu 1 311 -1 1306 185 8 88 chr2 73472254 73472401 -177215453 - MER34B LTR ERV1 -106 459 354 2422 82 20 0 chr2 73472401 73472706 -177215148 + AluSp SINE Alu 3 313 0 1306 185 8 88 chr2 73472706 73472824 -177215030 - MER34B LTR ERV1 -211 354 228 1235 150 45 28 chr2 73472838 73473277 -177214577 - LTR54 LTR ERV1 0 510 1 427 182 23 0 chr2 73473281 73473369 -177214485 - MER34B LTR ERV1 -367 198 109 2323 85 17 0 chr2 73473780 73474073 -177213781 + AluY SINE Alu 1 298 -13 40 83 0 0 chr2 73474114 73474210 -177213644 + AT_rich Low_complexity Low_complexity 1 96 0 507 113 13 200 chr2 73474210 73474360 -177213494 - MER34B LTR ERV1 -439 126 5 2695 40 0 0 chr2 73474684 73474988 -177212866 - AluY SINE Alu -7 304 1 2099 144 17 0 chr2 73475870 73476169 -177211685 - AluSq SINE Alu -9 304 1 1902 155 3 3 chr2 73476181 73476471 -177211383 - AluJb SINE Alu -22 290 1 2172 93 11 4 chr2 73476489 73476820 -177211034 - AluSx SINE Alu 0 333 1 2465 57 0 3 chr2 73477057 73477357 -177210497 + AluY SINE Alu 1 299 -12 485 252 35 9 chr2 73478567 73478682 -177209172 + MIR SINE MIR 33 150 -58 939 169 0 13 chr2 73478983 73479137 -177208717 - FRAM SINE Alu -5 171 20 1695 180 17 3 chr2 73479616 73479975 -177207879 - AluSx SINE Alu 0 312 1 895 128 0 50 chr2 73480008 73480149 -177207705 + AluJb SINE Alu 1 134 -178 1614 138 43 22 chr2 73480154 73480291 -177207563 + AluSx SINE Alu 1 134 -198 2577 71 0 0 chr2 73480291 73480600 -177207254 + AluY SINE Alu 1 309 -2 1614 138 43 22 chr2 73480600 73480788 -177207066 + AluSx SINE Alu 134 332 0 1899 148 13 47 chr2 73480796 73481113 -177206741 + AluJb SINE Alu 1 306 -6 201 147 0 0 chr2 73481242 73481276 -177206578 + (TA)n Simple_repeat Simple_repeat 1 34 0 2234 117 0 0 chr2 73481319 73481610 -177206244 - AluSx SINE Alu -21 291 1 4003 130 20 71 chr2 73481610 73481939 -177205915 - L1MB7 LINE L1 -44 6140 5796 2338 71 3 35 chr2 73481939 73482250 -177205604 - AluY SINE Alu -10 301 1 4003 130 20 71 chr2 73482250 73482618 -177205236 - L1MB7 LINE L1 -388 5796 5492 1804 148 41 14 chr2 73482618 73482908 -177204946 - AluJb SINE Alu -14 298 1 4003 130 20 71 chr2 73482908 73483064 -177204790 - L1MB7 LINE L1 -692 5492 5330 1203 164 0 76 chr2 73483066 73483304 -177204550 + AluJb SINE Alu 85 304 -8 1545 162 22 118 chr2 73483304 73483803 -177204051 - L1MB7 LINE L1 -813 5333 4883 1388 140 90 0 chr2 73483957 73484179 -177203675 - AluSg/x SINE Alu 0 310 69 2221 95 0 16 chr2 73484191 73484496 -177203358 + AluSx SINE Alu 1 300 -12 1105 169 72 79 chr2 73484582 73484640 -177203214 - Charlie1b DNA MER1_type -2238 523 466 1748 154 24 20 chr2 73484640 73484933 -177202921 + AluJb SINE Alu 1 294 -18 1105 169 72 79 chr2 73484933 73485097 -177202757 - Charlie1b DNA MER1_type -2295 466 302 2369 79 7 0 chr2 73485097 73485400 -177202454 + AluSp SINE Alu 1 305 -8 1105 169 72 79 chr2 73485400 73485595 -177202259 - Charlie1b DNA MER1_type -2459 302 108 2404 32 46 0 chr2 73486037 73486322 -177201532 - AluY SINE Alu -13 298 1 279 0 0 0 chr2 73486369 73486400 -177201454 + (CA)n Simple_repeat Simple_repeat 1 31 0 1922 131 10 3 chr2 73487024 73487321 -177200533 - AluJo SINE Alu -12 300 2 566 298 54 33 chr2 73487895 73488137 -177199717 + MIR SINE MIR 16 262 0 1424 164 102 29 chr2 73488197 73488471 -177199383 + AluJo SINE Alu 6 299 -13 347 276 88 12 chr2 73488582 73488752 -177199102 + L1ME4a LINE L1 5715 5897 -224 2193 113 6 25 chr2 73489164 73489482 -177198372 + AluSx SINE Alu 1 312 0 2428 82 0 7 chr2 73489716 73490021 -177197833 - AluY SINE Alu -8 303 1 193 118 39 39 chr2 73490063 73490114 -177197740 + A-rich Low_complexity Low_complexity 3 53 0 2255 113 7 0 chr2 73490121 73490423 -177197431 + AluSp SINE Alu 1 304 -9 341 155 0 17 chr2 73490449 73490507 -177197347 - MER5B DNA MER1_type 0 178 122 2151 106 53 0 chr2 73490624 73490907 -177196947 - AluSx SINE Alu -14 298 1 1781 213 46 58 chr2 73490907 73490919 -177196935 + L2 LINE L2 2477 2488 -825 411 21 0 0 chr2 73490919 73490967 -177196887 + (CA)n Simple_repeat Simple_repeat 1 48 0 1781 213 46 58 chr2 73490967 73491206 -177196648 + L2 LINE L2 2488 2728 -585 2138 142 3 0 chr2 73491206 73491517 -177196337 + AluSx SINE Alu 1 312 0 1781 213 46 58 chr2 73491517 73491952 -177195902 + L2 LINE L2 2728 3172 -141 24 0 0 0 chr2 73492212 73492236 -177195618 + AT_rich Low_complexity Low_complexity 1 24 0 434 301 149 19 chr2 73492317 73492574 -177195280 - L1ME LINE L1 -441 5680 5361 2064 122 23 0 chr2 73492574 73492877 -177194977 - AluSx SINE Alu -1 311 2 434 301 149 19 chr2 73492877 73492981 -177194873 - L1ME LINE L1 -760 5361 5272 534 257 31 61 chr2 73493254 73493515 -177194339 + MER112 DNA MER1_type 1 253 -3 390 269 62 41 chr2 73494117 73494262 -177193592 + MIR SINE MIR 28 175 -87 2351 106 3 3 chr2 73495522 73495833 -177192021 - AluSp SINE Alu -2 311 1 1389 200 21 42 chr2 73495884 73496169 -177191685 + AluJo SINE Alu 3 281 -31 2389 103 0 0 chr2 73496169 73496470 -177191384 - AluSg SINE Alu -7 303 2 1775 158 49 0 chr2 73496862 73497147 -177190707 - AluJb SINE Alu -12 300 2 605 111 81 0 chr2 73497156 73497255 -177190599 - L1MB3 LINE L1 0 6183 6077 203 258 16 65 chr2 73497458 73497520 -177190334 - MIR3 SINE MIR -15 193 135 310 222 82 82 chr2 73497539 73497674 -177190180 - L2 LINE L2 -2 3270 3136 203 285 121 72 chr2 73497686 73497935 -177189919 - L2 LINE L2 -438 2876 2616 2693 42 0 7 chr2 73498039 73498349 -177189505 - AluY SINE Alu -2 309 2 459 214 31 0 chr2 73498831 73498929 -177188925 - MIR3 SINE MIR -1 207 107 1037 170 6 0 chr2 73499114 73499279 -177188575 + FAM SINE Alu 2 167 -8 2242 95 27 0 chr2 73499279 73499573 -177188281 - AluSp SINE Alu -11 302 1 617 175 0 0 chr2 73499726 73499823 -177188031 + FRAM SINE Alu 33 129 -47 2188 117 0 7 chr2 73499827 73500126 -177187728 - AluSx SINE Alu -15 297 1 1396 138 5 5 chr2 73500185 73500395 -177187459 + AluJo SINE Alu 26 235 -77 279 0 0 0 chr2 73500415 73500446 -177187408 + (CA)n Simple_repeat Simple_repeat 2 32 0 2194 112 7 0 chr2 73500468 73500763 -177187091 - AluSx SINE Alu -15 297 1 558 209 84 25 chr2 73500765 73500924 -177186930 - MER33 DNA MER1_type -248 76 1 2407 81 0 10 chr2 73501201 73501374 -177186480 - AluSc SINE Alu -5 304 134 2395 101 0 3 chr2 73501374 73501682 -177186172 - AluSc SINE Alu -2 307 1 2407 81 0 10 chr2 73501682 73501815 -177186039 - AluSc SINE Alu -175 134 1 210 218 36 0 chr2 73502051 73502106 -177185748 + (CA)n Simple_repeat Simple_repeat 2 58 0 576 211 0 0 chr2 73502434 73502538 -177185316 + MER5B DNA MER1_type 1 104 -74 1266 134 0 0 chr2 73502988 73503167 -177184687 - AluJb SINE Alu -3 309 131 469 141 0 0 chr2 73503171 73503249 -177184605 - AluS SINE Alu 0 310 233 294 137 0 0 chr2 73503258 73503309 -177184545 - AluSq/x SINE Alu -169 134 84 1143 186 9 49 chr2 73503310 73503536 -177184318 - AluJb SINE Alu -95 217 1 211 285 111 49 chr2 73503538 73503682 -177184172 + L2 LINE L2 1770 1922 -1392 2153 107 0 25 chr2 73503701 73504117 -177183737 - AluSx SINE Alu 0 409 2 413 212 14 96 chr2 73504172 73504241 -177183613 - L2 LINE L2 -1 3312 3260 2150 111 0 0 chr2 73504241 73504538 -177183316 - AluSc SINE Alu -12 297 1 413 212 14 96 chr2 73504538 73504614 -177183240 - L2 LINE L2 -53 3260 3179 960 108 0 0 chr2 73504614 73504744 -177183110 + AluSq/x SINE Alu 1 130 -183 212 184 0 0 chr2 73506131 73506169 -177181685 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 1842 131 10 10 chr2 73506188 73506478 -177181376 - AluSx SINE Alu -20 292 3 1844 138 11 0 chr2 73506479 73506762 -177181092 - AluJo SINE Alu -5 307 22 1160 156 0 0 chr2 73506770 73506949 -177180905 - AluJo SINE Alu -133 179 1 2219 90 0 3 chr2 73507063 73507364 -177180490 - AluY SINE Alu -11 300 1 2322 84 7 0 chr2 73508006 73508314 -177179540 - AluSq SINE Alu -3 310 1 2037 121 3 3 chr2 73508400 73508706 -177179148 - AluSc SINE Alu -3 306 1 311 171 8 171 chr2 73508707 73508824 -177179030 + L2 LINE L2 3107 3204 -109 675 97 0 21 chr2 73508827 73509085 -177178769 + AluSx SINE Alu 1 306 -4 583 214 45 0 chr2 73509085 73509197 -177178657 + L2 LINE L2 3197 3313 0 180 194 32 0 chr2 73510106 73510137 -177177717 + L2 LINE L2 3142 3173 -99 2314 65 10 13 chr2 73510151 73510324 -177177530 - AluSp SINE Alu -7 306 133 2274 80 0 0 chr2 73510324 73510624 -177177230 - AluSg SINE Alu -10 300 1 2314 65 10 13 chr2 73510624 73510757 -177177097 - AluSp SINE Alu -180 133 1 1530 139 30 41 chr2 73510840 73511135 -177176719 - AluJb SINE Alu -20 292 1 1330 196 7 14 chr2 73511160 73511440 -177176414 + AluJo SINE Alu 1 278 -34 234 23 45 23 chr2 73511444 73511488 -177176366 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 1575 148 4 26 chr2 73511520 73511784 -177176070 - AluSx SINE Alu -11 301 44 393 164 61 41 chr2 73511838 73511959 -177175895 - AluSg/x SINE Alu -1 299 215 2208 85 7 0 chr2 73512036 73512329 -177175525 - AluSc SINE Alu -13 296 2 431 341 16 16 chr2 73512912 73513094 -177174760 + MIR SINE MIR 71 252 -10 194 149 64 0 chr2 73514214 73514261 -177173593 + C-rich Low_complexity Low_complexity 4 53 0 188 181 194 14 chr2 73514980 73515052 -177172802 - MIR SINE MIR -132 130 46 358 256 0 23 chr2 73515399 73515485 -177172369 + MER5A DNA MER1_type 21 104 -85 1763 94 0 58 chr2 73515492 73515768 -177172086 + AluSq SINE Alu 9 268 -45 258 306 0 0 chr2 73515977 73516039 -177171815 + MER5A DNA MER1_type 128 189 0 2084 97 3 3 chr2 73516177 73516475 -177171379 + AluSp SINE Alu 1 298 -15 2247 84 3 7 chr2 73517101 73517398 -177170456 + AluSx SINE Alu 1 296 -16 2303 78 3 3 chr2 73518336 73518643 -177169211 - AluSc SINE Alu -1 308 2 240 274 0 0 chr2 73519220 73519232 -177168622 + L2 LINE L2 3251 3262 -51 2156 82 3 44 chr2 73519232 73519549 -177168305 + AluSg SINE Alu 1 304 -6 240 274 0 0 chr2 73519549 73519587 -177168267 + L2 LINE L2 3261 3301 -12 5147 138 140 148 chr2 73519769 73521479 -177166375 + pTR5 LTR ERV1 743 2438 0 2088 92 7 7 chr2 73522441 73522733 -177165121 - AluSc SINE Alu -17 292 1 1305 197 131 0 chr2 73522760 73523019 -177164835 + AluJo SINE Alu 1 293 -9 1935 137 6 16 chr2 73523044 73523357 -177164497 + AluSx SINE Alu 1 310 -2 26 50 0 0 chr2 73523363 73523403 -177164451 + AT_rich Low_complexity Low_complexity 1 40 0 1979 126 20 0 chr2 73523466 73523767 -177164087 - AluSx SINE Alu -5 307 1 2037 115 3 3 chr2 73524443 73524738 -177163116 + AluSg SINE Alu 1 295 -15 2019 53 27 4 chr2 73525056 73525318 -177162536 - AluY SINE Alu -13 298 31 206 316 0 11 chr2 73525342 73525437 -177162417 + A-rich Low_complexity Low_complexity 4 97 0 2324 72 3 0 chr2 73525468 73525774 -177162080 + AluY SINE Alu 1 307 -4 340 220 0 0 chr2 73525823 73525882 -177161972 + AluJ/FLAM SINE Alu 2 60 -242 16386 148 13 9 chr2 73525882 73526722 -177161132 - HERVL18 LTR ERVL -3224 2823 1988 2338 66 10 0 chr2 73526722 73527027 -177160827 - AluY SINE Alu -3 308 1 16386 148 13 9 chr2 73527027 73528740 -177159114 - HERVL18 LTR ERVL -4059 1988 192 1057 150 28 14 chr2 73528956 73529169 -177158685 + AluSg/x SINE Alu 95 310 -2 2261 96 0 0 chr2 73529543 73529846 -177158008 + AluY SINE Alu 1 303 -8 2037 132 7 0 chr2 73529925 73530221 -177157633 + AluSx SINE Alu 1 298 -14 236 267 0 0 chr2 73530253 73530313 -177157541 - L2 LINE L2 -700 2614 2555 2171 109 0 10 chr2 73530417 73530728 -177157126 + AluSx SINE Alu 1 308 -4 712 186 8 0 chr2 73530739 73530857 -177156997 + FLAM_C SINE Alu 2 120 -23 23 0 0 0 chr2 73530857 73530880 -177156974 + AT_rich Low_complexity Low_complexity 1 23 0 1421 151 46 36 chr2 73530885 73531190 -177156664 + AluJb SINE Alu 5 312 0 1819 112 48 4 chr2 73531213 73531506 -177156348 + AluSg SINE Alu 1 305 0 23 54 0 0 chr2 73531667 73531704 -177156150 + AT_rich Low_complexity Low_complexity 1 37 0 1154 154 0 51 chr2 73532706 73532748 -177155106 + AluJo SINE Alu 87 130 -182 2288 79 0 0 chr2 73532748 73533038 -177154816 - AluSg SINE Alu -20 290 1 1154 154 0 51 chr2 73533038 73533229 -177154625 + AluJo SINE Alu 130 308 -4 2194 90 3 6 chr2 73533233 73533590 -177154264 + AluY SINE Alu 1 356 0 1028 163 16 5 chr2 73533595 73533785 -177154069 + AluSq SINE Alu 1 192 -121 1231 156 0 0 chr2 73533787 73533967 -177153887 - HERVL18 LTR ERVL -3223 2824 2645 942 101 0 36 chr2 73533977 73534115 -177153739 + AluSp/q SINE Alu 158 290 -23 358 276 98 52 chr2 73534138 73534312 -177153542 - HAL1 LINE L1 -1244 1263 1082 2015 131 0 13 chr2 73534319 73534625 -177153229 - AluSx SINE Alu -10 302 1 1474 170 55 4 chr2 73534629 73534927 -177152927 - AluSx SINE Alu 0 312 1 864 134 22 0 chr2 73534927 73535061 -177152793 - AluJo SINE Alu -175 137 1 1012 131 30 0 chr2 73535067 73535235 -177152619 - AluSg/x SINE Alu -2 310 138 2073 109 0 10 chr2 73535239 73535406 -177152448 - AluSq SINE Alu -13 300 136 1836 82 104 29 chr2 73535406 73535686 -177152168 - AluSx SINE Alu -11 301 1 2073 109 0 10 chr2 73535686 73535821 -177152033 - AluSq SINE Alu -177 136 1 818 318 71 16 chr2 73535887 73536255 -177151599 - HAL1 LINE L1 -1600 907 520 2064 127 13 3 chr2 73536454 73536762 -177151092 + AluSx SINE Alu 1 311 -1 180 0 0 0 chr2 73536801 73536821 -177151033 + (T)n Simple_repeat Simple_repeat 1 20 0 1919 142 0 0 chr2 73536826 73537121 -177150733 + AluSq SINE Alu 1 295 -18 21 0 0 0 chr2 73538568 73538589 -177149265 + AT_rich Low_complexity Low_complexity 1 21 0 1818 170 0 16 chr2 73541155 73541472 -177146382 - AluJb SINE Alu 0 312 1 2011 143 0 0 chr2 73541481 73541775 -177146079 - AluSx SINE Alu -18 294 1 231 61 0 0 chr2 73542465 73542498 -177145356 + (A)n Simple_repeat Simple_repeat 1 33 0 2011 84 17 30 chr2 73543586 73543884 -177143970 - AluSx SINE Alu -18 294 1 21 0 0 0 chr2 73543964 73543985 -177143869 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 73544544 73544565 -177143289 + AT_rich Low_complexity Low_complexity 1 21 0 1936 130 0 41 chr2 73545002 73545228 -177142626 - AluSx SINE Alu -10 302 91 2189 90 20 0 chr2 73545228 73545529 -177142325 - AluY SINE Alu -4 307 1 1936 130 0 41 chr2 73545529 73545617 -177142237 - AluSx SINE Alu -221 91 1 653 309 199 41 chr2 73545800 73546271 -177141583 - L2 LINE L2 -2 3311 2916 1669 68 85 92 chr2 73546271 73546564 -177141290 - AluY SINE Alu -19 292 2 653 309 199 41 chr2 73546564 73547150 -177140704 - L2 LINE L2 -397 2916 1992 691 216 101 7 chr2 73547336 73547484 -177140370 - AluJo SINE Alu -31 281 120 784 118 15 44 chr2 73547575 73547711 -177140143 - AluJo SINE Alu -169 133 2 1774 212 35 28 chr2 73547786 73547961 -177139893 + MLT1C LTR MaLR 1 173 -294 1793 159 10 3 chr2 73547961 73548251 -177139603 + AluJb SINE Alu 1 292 -20 1774 212 35 28 chr2 73548251 73548537 -177139317 + MLT1C LTR MaLR 173 465 -2 225 270 184 38 chr2 73548595 73548716 -177139138 - L2 LINE L2 -1486 1828 1726 1568 141 6 70 chr2 73548716 73548852 -177139002 + AluJo SINE Alu 1 144 -168 2157 102 0 0 chr2 73548852 73549137 -177138717 - AluSg SINE Alu -25 285 1 1568 141 6 70 chr2 73549137 73549313 -177138541 + AluJo SINE Alu 144 293 -19 225 270 184 38 chr2 73549313 73549376 -177138478 - L2 LINE L2 -1588 1726 1617 1197 174 39 35 chr2 73549394 73549631 -177138223 + L1MB7 LINE L1 5901 6141 -43 1631 164 43 0 chr2 73549631 73549912 -177137942 - AluJb SINE Alu -19 293 1 1197 174 39 35 chr2 73549912 73549956 -177137898 + L1MB7 LINE L1 6141 6183 -1 187 277 121 12 chr2 73550015 73550098 -177137756 - L2 LINE L2 -1718 1596 1505 355 335 123 21 chr2 73550102 73550338 -177137516 - L2 LINE L2 -1975 1339 1080 2213 83 3 3 chr2 73550467 73550756 -177137098 + AluSg SINE Alu 2 290 -20 1755 161 28 0 chr2 73551260 73551546 -177136308 - AluJb SINE Alu -18 294 1 30 27 0 0 chr2 73551565 73551602 -177136252 + AT_rich Low_complexity Low_complexity 1 37 0 429 240 221 0 chr2 73551602 73551706 -177136148 - FLAM_C SINE Alu -14 129 3 21 0 0 0 chr2 73551707 73551728 -177136126 + AT_rich Low_complexity Low_complexity 1 21 0 2074 112 10 0 chr2 73551747 73552050 -177135804 - AluSx SINE Alu -6 306 1 2091 125 3 0 chr2 73557501 73557790 -177130064 + AluSx SINE Alu 13 302 -10 2251 89 3 16 chr2 73557791 73558094 -177129760 + AluY SINE Alu 3 301 -10 2220 124 0 3 chr2 73558260 73558559 -177129295 + AluSq SINE Alu 1 298 -15 2235 109 0 13 chr2 73558909 73559213 -177128641 + AluSg SINE Alu 1 300 -10 791 125 0 23 chr2 73559224 73559352 -177128502 + FLAM_A SINE Alu 18 142 0 2560 60 0 22 chr2 73559813 73560130 -177127724 + AluY SINE Alu 2 311 0 2631 67 3 0 chr2 73560150 73560462 -177127392 + AluSp SINE Alu 1 313 0 2186 118 3 0 chr2 73560478 73560775 -177127079 + AluSx SINE Alu 1 298 -14 879 125 0 0 chr2 73561036 73561156 -177126698 - FLAM_C SINE Alu -17 126 7 2167 120 3 0 chr2 73561378 73561669 -177126185 + AluSg SINE Alu 1 292 -18 2347 78 0 3 chr2 73561802 73562085 -177125769 + AluY SINE Alu 1 282 -29 835 101 6 107 chr2 73562428 73562587 -177125267 + FLAM_C SINE Alu 1 143 0 290 268 61 69 chr2 73562596 73562827 -177125027 + L1 LINE L1 4725 4953 -1193 1098 153 6 0 chr2 73562892 73563083 -177124771 - AluJ SINE Alu 0 310 119 346 70 0 127 chr2 73563083 73563111 -177124743 - MER41B LTR ERV1 -93 542 512 2305 93 7 10 chr2 73563111 73563421 -177124433 + AluSc SINE Alu 1 309 0 346 70 0 127 chr2 73563421 73563463 -177124391 - MER41B LTR ERV1 -123 512 481 846 171 0 14 chr2 73563463 73563603 -177124251 - AluJ SINE Alu -170 142 5 2557 71 0 3 chr2 73563663 73563973 -177123881 + AluSx SINE Alu 1 309 -3 2315 105 3 0 chr2 73564020 73564315 -177123539 + AluSp SINE Alu 1 296 -17 1092 141 6 0 chr2 73564488 73564651 -177123203 + FAM SINE Alu 4 167 -8 2095 140 0 16 chr2 73564723 73565037 -177122817 + AluJo SINE Alu 1 309 -3 2324 62 7 23 chr2 73565318 73565651 -177122203 + AluY SINE Alu 1 311 0 2298 101 0 0 chr2 73565660 73565957 -177121897 + AluSx SINE Alu 1 297 -15 2152 125 7 0 chr2 73566064 73566367 -177121487 + AluSx SINE Alu 1 305 -7 2038 107 7 7 chr2 73566569 73566892 -177120962 - AluSc SINE Alu 0 323 1 1162 83 7 0 chr2 73566892 73567036 -177120818 - AluSq/x SINE Alu -168 145 1 2135 53 88 32 chr2 73567045 73567330 -177120524 - AluY SINE Alu -10 301 1 2138 99 7 17 chr2 73567450 73567752 -177120102 + AluSx SINE Alu 1 299 -13 759 178 7 0 chr2 73567845 73567980 -177119874 - AluJo SINE Alu -176 136 1 2218 117 0 10 chr2 73568278 73568587 -177119267 - AluSx SINE Alu -6 306 1 211 232 43 14 chr2 73569376 73569445 -177118409 + MIR SINE MIR 80 150 -112 2177 104 10 0 chr2 73569704 73570002 -177117852 + AluSp SINE Alu 2 302 -11 1210 179 34 84 chr2 73570002 73570148 -177117706 - AluJo SINE Alu -30 282 130 2221 107 3 0 chr2 73570148 73570448 -177117406 - AluSx SINE Alu -6 306 6 1210 179 34 84 chr2 73570448 73570459 -177117395 - AluJo SINE Alu -182 130 120 180 0 0 0 chr2 73570459 73570479 -177117375 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 1210 179 34 84 chr2 73570479 73570508 -177117346 - AluJo SINE Alu -192 120 91 2086 120 17 0 chr2 73570508 73570799 -177117055 + AluSx SINE Alu 1 296 -16 1210 179 34 84 chr2 73570799 73570907 -177116947 - AluJo SINE Alu -221 91 1 2301 101 0 0 chr2 73571012 73571310 -177116544 - AluSq SINE Alu -15 298 1 2409 52 3 3 chr2 73571399 73571686 -177116168 - AluY SINE Alu -24 287 1 1999 142 7 16 chr2 73571712 73572022 -177115832 + AluSx SINE Alu 4 310 -2 607 184 14 21 chr2 73572551 73572692 -177115162 - AluSq/x SINE Alu -171 141 2 344 180 0 0 chr2 73572748 73572809 -177115045 - Alu SINE Alu -7 295 235 247 100 25 0 chr2 73572806 73572846 -177115008 - Alu SINE Alu -175 127 87 * 324 70 0 0 chr2 73572927 73572970 -177114884 + (CA)n Simple_repeat Simple_repeat 1 43 0 2476 78 3 0 chr2 73573430 73573738 -177114116 - AluSq SINE Alu -4 309 1 506 214 10 0 chr2 73573740 73573838 -177114016 - AluJo/FLAM SINE Alu -185 127 29 1771 131 35 11 chr2 73573934 73574216 -177113638 - AluSx SINE Alu -13 299 11 1672 90 34 4 chr2 73574217 73574450 -177113404 + AluSg/x SINE Alu 65 304 -6 2571 55 0 0 chr2 73574513 73574806 -177113048 + AluY SINE Alu 1 293 -18 898 180 7 0 chr2 73574806 73574956 -177112898 + AluJb SINE Alu 134 284 -28 186 43 0 0 chr2 73574960 73574983 -177112871 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1845 149 22 0 chr2 73575193 73575468 -177112386 + AluSx SINE Alu 9 289 -23 2241 117 0 22 chr2 73575569 73575885 -177111969 - AluSx SINE Alu -3 309 1 1147 181 184 53 chr2 73575928 73576194 -177111660 - AluJb SINE Alu -1 301 1 2115 121 7 0 chr2 73576330 73576649 -177111205 + AluSx SINE Alu 1 321 0 1735 194 47 18 chr2 73576653 73576978 -177110876 - L1MD2 LINE L1 -22 6337 5998 2218 114 3 3 chr2 73576978 73577275 -177110579 - AluSq SINE Alu -16 297 1 1735 194 47 18 chr2 73577275 73577332 -177110522 - L1MD2 LINE L1 -361 5998 5944 36 23 0 0 chr2 73577336 73577379 -177110475 + AT_rich Low_complexity Low_complexity 1 43 0 828 159 0 8 chr2 73577434 73577566 -177110288 - AluSq/x SINE Alu -181 131 1 1594 43 0 90 chr2 73577566 73577799 -177110055 - L1PA13 LINE L1 -96 6067 5856 771 142 77 44 chr2 73578425 73578549 -177109305 + MER53 DNA DNA 1 134 -55 2176 77 7 0 chr2 73578549 73578821 -177109033 + AluY SINE Alu 23 296 -15 771 142 77 44 chr2 73578821 73578879 -177108975 + MER53 DNA DNA 134 189 0 457 250 30 39 chr2 73578887 73578920 -177108934 - L1ME4a LINE L1 -260 5861 5829 1080 171 0 11 chr2 73578920 73579096 -177108758 - FAM SINE Alu 0 175 2 457 250 30 39 chr2 73579096 73579294 -177108560 - L1ME4a LINE L1 -292 5829 5632 2268 119 0 0 chr2 73579294 73579596 -177108258 + AluSq SINE Alu 1 302 -11 972 123 68 0 chr2 73579596 73579742 -177108112 + AluSg/x SINE Alu 133 288 -22 1946 140 0 14 chr2 73580058 73580344 -177107510 + AluJb SINE Alu 1 282 -30 258 56 0 0 chr2 73580349 73580385 -177107469 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2208 102 0 3 chr2 73580629 73580935 -177106919 + AluSx SINE Alu 1 305 0 2110 100 36 0 chr2 73580970 73581251 -177106603 + AluSx SINE Alu 14 304 -8 207 69 0 0 chr2 73581251 73581280 -177106574 + (TG)n Simple_repeat Simple_repeat 2 30 0 718 171 0 8 chr2 73581592 73581709 -177106145 + AluJb SINE Alu 2 117 -195 31 44 0 0 chr2 73581709 73581754 -177106100 + AT_rich Low_complexity Low_complexity 1 45 0 1091 153 74 14 chr2 73582060 73582275 -177105579 + AluJb SINE Alu 85 312 0 2313 92 0 0 chr2 73582314 73582621 -177105233 + AluSx SINE Alu 1 307 0 2163 144 0 0 chr2 73582630 73582936 -177104918 + AluSx SINE Alu 1 306 -6 1885 162 10 7 chr2 73583026 73583335 -177104519 + AluJb SINE Alu 3 312 0 2432 69 0 0 chr2 73584411 73584702 -177103152 - AluSg SINE Alu -19 291 1 1557 187 37 4 chr2 73585460 73585733 -177102121 + AluJo SINE Alu 1 282 -30 2130 94 45 3 chr2 73585733 73586020 -177101834 - AluY SINE Alu -12 299 1 1682 152 0 19 chr2 73586141 73586404 -177101450 - AluJo SINE Alu -43 269 12 689 104 21 0 chr2 73586544 73586640 -177101214 - AluSx SINE Alu -23 287 190 1116 106 0 0 chr2 73586640 73586781 -177101073 - AluSx SINE Alu -172 141 1 2257 124 0 0 chr2 73586784 73587090 -177100764 - AluY SINE Alu -5 306 1 2483 68 7 0 chr2 73587092 73587400 -177100454 - AluSp SINE Alu -3 310 1 595 266 21 11 chr2 73587432 73587633 -177100221 - L1MC/D LINE L1 -542 5817 5614 1504 186 157 0 chr2 73587670 73588015 -177099839 + L1MD3 LINE L1 7591 7989 -6 2404 85 0 7 chr2 73588036 73588342 -177099512 + AluSx SINE Alu 1 304 -8 403 186 27 13 chr2 73588343 73588535 -177099319 + L1MC2 LINE L1 6152 6340 -1627 2341 88 0 10 chr2 73588535 73588830 -177099024 + AluSx SINE Alu 1 292 -20 403 186 27 13 chr2 73588830 73588869 -177098985 + L1MC2 LINE L1 6340 7966 -1 2287 106 3 10 chr2 73588974 73589286 -177098568 + AluSq SINE Alu 1 310 -3 183 42 0 0 chr2 73589389 73589413 -177098441 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5947 21 7 0 chr2 73589416 73590090 -177097764 - L1PA3 LINE L1 -7 6148 5470 22 0 0 0 chr2 73590141 73590163 -177097691 + AT_rich Low_complexity Low_complexity 1 22 0 203 229 16 0 chr2 73590175 73590236 -177097618 + (TA)n Simple_repeat Simple_repeat 2 63 0 184 221 118 29 chr2 73590249 73590317 -177097537 - MIR SINE MIR -68 140 67 1195 170 14 31 chr2 73590452 73590675 -177097179 + MER20 DNA MER1_type 1 219 0 351 230 0 0 chr2 73590715 73590802 -177097052 + (TATG)n Simple_repeat Simple_repeat 2 88 0 1944 150 0 10 chr2 73590803 73591097 -177096757 - AluSx SINE Alu -21 291 1 2099 110 0 27 chr2 73591107 73591407 -177096447 - AluSq SINE Alu -21 292 1 2520 67 3 0 chr2 73591414 73591713 -177096141 - AluY SINE Alu -8 303 4 288 167 61 0 chr2 73592384 73592450 -177095404 - MIR SINE MIR -72 190 121 959 106 23 0 chr2 73593286 73593418 -177094436 + AluJo SINE Alu 2 136 -176 2247 78 10 23 chr2 73593849 73594158 -177093696 + AluSc SINE Alu 1 305 -4 1367 171 60 14 chr2 73594271 73594552 -177093302 + MER49 LTR ERV1 1 294 -629 463 207 0 28 chr2 73594538 73594657 -177093197 + MER4E LTR ERV1 62 284 -588 * 362 133 29 181 chr2 73594659 73594720 -177093134 + MER4D LTR ERV1 548 588 -315 2118 118 3 7 chr2 73594720 73595024 -177092830 - AluSx SINE Alu -5 307 5 362 133 29 181 chr2 73595024 73595067 -177092787 + MER4D LTR ERV1 588 636 -267 2354 98 0 0 chr2 73595102 73595409 -177092445 - AluSg SINE Alu -3 307 1 1673 136 39 55 chr2 73595420 73595729 -177092125 - AluJo SINE Alu -8 304 1 2259 105 3 0 chr2 73595766 73596061 -177091793 + AluSx SINE Alu 10 305 -7 2516 68 0 3 chr2 73596061 73596370 -177091484 + AluY SINE Alu 1 308 -3 22 43 0 21 chr2 73597119 73597130 -177090724 + AT_rich Low_complexity Low_complexity 1 11 -35 2266 88 7 0 chr2 73597130 73597413 -177090441 - AluSg SINE Alu -25 285 1 22 43 0 21 chr2 73597413 73597448 -177090406 + AT_rich Low_complexity Low_complexity 11 46 0 240 35 0 0 chr2 73597585 73597614 -177090240 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2304 103 3 0 chr2 73597687 73597978 -177089876 + AluSp SINE Alu 1 292 -21 241 182 0 0 chr2 73597995 73598039 -177089815 - LTR24C LTR ERV1 -73 562 519 357 24 0 0 chr2 73598095 73598137 -177089717 + (TG)n Simple_repeat Simple_repeat 2 43 0 2335 88 3 3 chr2 73598756 73599050 -177088804 - AluSp SINE Alu -17 296 3 558 221 49 0 chr2 73599050 73599172 -177088682 - FLAM_A SINE Alu -5 128 1 1591 173 13 33 chr2 73599186 73599487 -177088367 - AluJb SINE Alu -17 295 1 2088 127 7 0 chr2 73599674 73599965 -177087889 + AluSx SINE Alu 1 293 -19 2074 111 10 7 chr2 73600136 73600433 -177087421 + AluSx SINE Alu 1 298 -14 2449 71 0 7 chr2 73600433 73600729 -177087125 + AluY SINE Alu 1 294 -17 1231 156 13 4 chr2 73600814 73601039 -177086815 - AluSg/x SINE Alu -2 308 82 1557 158 3 64 chr2 73601323 73601634 -177086220 + AluJo SINE Alu 6 297 -15 2502 55 0 0 chr2 73601652 73601941 -177085913 - AluY SINE Alu -22 289 1 629 247 134 39 chr2 73602375 73602951 -177084903 + L1MC5 LINE L1 7000 7510 -496 691 176 8 23 chr2 73602996 73603127 -177084727 + FLAM_A SINE Alu 4 132 -1 1716 166 0 11 chr2 73603136 73603413 -177084441 + AluSx SINE Alu 1 274 -38 966 184 50 10 chr2 73603504 73603705 -177084149 + L1MD3 LINE L1 7072 7280 -715 2253 85 17 7 chr2 73603711 73604005 -177083849 + AluSc SINE Alu 1 297 -12 483 271 25 8 chr2 73604021 73604139 -177083715 + MLT1F1 LTR MaLR 3 122 -445 420 158 0 17 chr2 73604208 73604467 -177083387 + AluJb SINE Alu 5 297 -15 * 930 149 242 14 chr2 73604466 73604681 -177083173 + L1MD3 LINE L1 7655 7918 -77 1662 114 144 4 chr2 73604797 73605068 -177082786 + AluSx SINE Alu 1 309 -3 1856 122 132 26 chr2 73605187 73605491 -177082363 + MER1B DNA MER1_type 1 336 -1 1711 175 11 4 chr2 73605695 73605975 -177081879 + AluJb SINE Alu 3 284 -28 180 0 0 0 chr2 73605978 73605998 -177081856 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 666 288 245 24 chr2 73606309 73606999 -177080855 + L2 LINE L2 2480 3310 -3 2367 70 0 0 chr2 73607119 73607404 -177080450 + AluY SINE Alu 20 304 -7 1907 113 22 25 chr2 73607558 73607833 -177080021 - AluSx SINE Alu -38 274 1 2338 104 0 3 chr2 73608461 73608770 -177079084 - AluSx SINE Alu -4 308 1 2222 99 0 37 chr2 73609150 73609472 -177078382 + AluSx SINE Alu 1 310 -2 666 0 0 0 chr2 73611535 73611606 -177076248 - tRNA-Gly-GGG tRNA tRNA -3 71 1 2236 116 3 0 chr2 73612030 73612340 -177075514 + AluSx SINE Alu 1 311 -1 442 248 39 16 chr2 73612508 73612637 -177075217 + L1ME LINE L1 5625 5756 -365 2209 105 9 25 chr2 73612685 73613000 -177074854 - AluSx SINE Alu 0 312 3 352 239 196 54 chr2 73613112 73613157 -177074697 - MARNA DNA Mariner -41 545 508 1693 113 93 21 chr2 73613157 73613448 -177074406 + AluSx SINE Alu 1 312 0 352 239 196 54 chr2 73613448 73613586 -177074268 - MARNA DNA Mariner -78 508 336 1842 153 22 31 chr2 73613633 73613993 -177073861 - L1MB8 LINE L1 -45 6133 5777 2522 47 0 3 chr2 73664191 73664489 -177023365 - AluY SINE Alu -14 297 1 209 30 61 0 chr2 73664521 73664554 -177023300 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 537 67 308 19 chr2 73664554 73664658 -177023196 + AluJo SINE Alu 2 135 -177 2403 56 0 0 chr2 73664811 73665099 -177022755 - AluY SINE Alu -23 288 1 1760 163 21 0 chr2 73665265 73665547 -177022307 - AluJo SINE Alu -22 290 3 262 294 0 0 chr2 73667766 73667834 -177020020 - MIR SINE MIR -12 250 183 1807 144 6 50 chr2 73667864 73668183 -177019671 - AluJb SINE Alu -7 305 1 2444 75 0 10 chr2 73668336 73668629 -177019225 - AluSp SINE Alu -14 299 10 701 166 55 28 chr2 73668661 73668806 -177019048 - L2 LINE L2 -3 3310 3162 * 1444 261 104 0 chr2 73668802 73669254 -177018600 - L2 LINE L2 -1001 2313 1815 2577 72 0 0 chr2 73669832 73670139 -177017715 - AluY SINE Alu -1 310 4 2274 91 10 7 chr2 73670143 73670441 -177017413 - AluSq SINE Alu -14 299 1 2218 93 7 3 chr2 73670576 73670867 -177016987 - AluSc SINE Alu -17 292 1 971 185 137 88 chr2 73672508 73672596 -177015258 - L1ME2 LINE L1 0 6164 6082 2258 107 0 3 chr2 73672596 73672894 -177014960 + AluSx SINE Alu 2 298 -14 971 185 137 88 chr2 73672894 73673164 -177014690 - L1ME2 LINE L1 -82 6082 5777 1953 139 3 7 chr2 73673164 73673459 -177014395 - AluSx SINE Alu -18 294 1 971 185 137 88 chr2 73673459 73673552 -177014302 - L1ME2 LINE L1 -387 5777 5690 704 168 42 0 chr2 73673556 73673675 -177014179 - FLAM_C SINE Alu -11 132 9 475 172 11 0 chr2 73673687 73673774 -177014080 - L1ME2 LINE L1 -477 5687 5600 2238 103 3 29 chr2 73674389 73674699 -177013155 + AluSq SINE Alu 5 306 -7 378 42 0 0 chr2 73674699 73674747 -177013107 + (CAAG)n Simple_repeat Simple_repeat 2 49 0 712 262 44 49 chr2 73674890 73675115 -177012739 - MIR SINE MIR -7 255 32 2049 138 6 10 chr2 73675397 73675745 -177012109 + AluSx SINE Alu 1 347 0 2183 107 13 13 chr2 73676482 73676781 -177011073 + AluSx SINE Alu 1 299 -13 35 24 0 0 chr2 73676873 73676915 -177010939 + AT_rich Low_complexity Low_complexity 1 42 0 204 304 52 52 chr2 73676950 73677065 -177010789 + L2 LINE L2 2531 2645 -669 2163 128 0 0 chr2 73677073 73677361 -177010493 + AluSx SINE Alu 9 296 -16 225 0 0 0 chr2 73677405 73677430 -177010424 + (TA)n Simple_repeat Simple_repeat 1 25 0 288 0 0 0 chr2 73677437 73677469 -177010385 + (TTAAA)n Simple_repeat Simple_repeat 1 32 0 2230 86 7 3 chr2 73677469 73677753 -177010101 - AluSg SINE Alu -22 288 1 298 253 75 0 chr2 73677764 73677938 -177009916 - L1ME2 LINE L1 -872 5274 5088 1929 160 0 0 chr2 73677947 73678240 -177009614 + AluJo SINE Alu 1 293 -19 2279 95 0 0 chr2 73678299 73678614 -177009240 + AluSx SINE Alu 1 315 0 2278 119 3 3 chr2 73678618 73678930 -177008924 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 73678930 73678953 -177008901 + AT_rich Low_complexity Low_complexity 1 23 0 520 215 91 62 chr2 73678978 73679109 -177008745 - L1ME2 LINE L1 -3129 3017 2891 342 98 0 0 chr2 73679109 73679160 -177008694 + (CA)n Simple_repeat Simple_repeat 2 52 0 1785 157 14 11 chr2 73679166 73679453 -177008401 - AluJb SINE Alu -24 288 1 520 215 91 62 chr2 73679453 73679588 -177008266 - L1ME2 LINE L1 -3259 2887 2736 2213 116 3 0 chr2 73679616 73679909 -177007945 - AluSg SINE Alu -16 294 1 404 302 149 37 chr2 73679914 73680156 -177007698 + L2 LINE L2 3024 3292 -21 198 0 0 0 chr2 73680276 73680298 -177007556 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 1023 151 0 0 chr2 73680298 73680450 -177007404 - AluSg/x SINE Alu -26 286 135 252 197 113 42 chr2 73680501 73680572 -177007282 - MLT1J LTR MaLR -60 451 376 334 250 167 8 chr2 73680628 73680689 -177007165 - L1ME4a LINE L1 -127 5994 5944 2381 80 3 3 chr2 73680689 73680988 -177006866 + AluSc SINE Alu 1 299 -10 334 250 167 8 chr2 73680988 73681058 -177006796 - L1ME4a LINE L1 -177 5944 5842 264 224 0 17 chr2 73681842 73681900 -177005954 - MER3 DNA MER1_type 0 209 153 740 223 0 0 chr2 73681909 73682039 -177005815 + FLAM_C SINE Alu 4 133 -10 2289 126 0 0 chr2 73682045 73682347 -177005507 + AluSx SINE Alu 1 302 -10 2224 93 11 0 chr2 73682350 73682653 -177005201 + AluSg SINE Alu 1 306 0 568 164 104 8 chr2 73682656 73682790 -177005064 - MER3 DNA MER1_type -57 152 6 24 53 0 0 chr2 73683152 73683190 -177004664 + AT_rich Low_complexity Low_complexity 1 38 0 2154 123 0 23 chr2 73683280 73683416 -177004438 + AluSg SINE Alu 2 140 -170 2186 100 0 27 chr2 73683416 73683717 -177004137 + AluSg SINE Alu 1 293 -17 2154 123 0 23 chr2 73683717 73683890 -177003964 + AluSg SINE Alu 140 304 -6 2457 97 0 3 chr2 73683900 73684209 -177003645 + AluSg SINE Alu 1 308 -2 677 203 0 53 chr2 73684213 73684313 -177003541 - FLAM_C SINE Alu -185 127 34 2365 92 109 0 chr2 73684313 73684651 -177003203 + MER51B LTR ERV1 1 375 -2 677 203 0 53 chr2 73684651 73684683 -177003171 - FLAM_C SINE Alu -278 34 2 217 358 110 0 chr2 73685024 73685133 -177002721 - MIR SINE MIR -14 248 128 341 104 31 125 chr2 73685137 73685191 -177002663 - MER92B LTR ERV1 -8 628 585 599 230 0 52 chr2 73685191 73685326 -177002528 + FLAM_A SINE Alu 1 128 -5 341 104 31 125 chr2 73685326 73685367 -177002487 - MER92B LTR ERV1 -51 585 542 2320 201 41 44 chr2 73685474 73685577 -177002277 - MER92B LTR ERV1 -51 585 483 2112 127 3 34 chr2 73685577 73685899 -177001955 - AluSx SINE Alu 0 312 1 2320 201 41 44 chr2 73685899 73686382 -177001472 - MER92B LTR ERV1 -153 483 1 207 236 45 62 chr2 73686397 73686500 -177001354 - MIR SINE MIR -95 113 15 1428 175 104 0 chr2 73686681 73686921 -177000933 - AluJo SINE Alu -15 297 33 232 188 130 29 chr2 73686921 73686990 -177000864 - MER112 DNA MER1_type -180 80 5 303 267 70 12 chr2 73687542 73687628 -177000226 + MIR3 SINE MIR 87 177 -31 1404 167 137 4 chr2 73688115 73688378 -176999476 - AluJo SINE Alu -14 298 1 1383 181 35 63 chr2 73689300 73689591 -176998263 - MER89 LTR ERV1 -1 558 223 2130 144 0 0 chr2 73689591 73689903 -176997951 + AluSx SINE Alu 1 312 0 1383 181 35 63 chr2 73689903 73690063 -176997791 - MER89 LTR ERV1 -336 223 60 995 234 68 0 chr2 73690776 73690998 -176996856 - MIR SINE MIR -24 238 2 2193 98 7 10 chr2 73691087 73691252 -176996602 - AluSx SINE Alu -13 299 134 2377 73 10 0 chr2 73691252 73691553 -176996301 - AluY SINE Alu -7 304 1 2193 98 7 10 chr2 73691553 73691683 -176996171 - AluSx SINE Alu -178 134 5 1026 170 0 6 chr2 73691928 73692093 -176995761 + FRAM SINE Alu 1 164 -12 850 207 0 0 chr2 73692092 73692237 -176995617 - AluJo SINE Alu -81 231 87 * 2133 134 0 3 chr2 73692252 73692550 -176995304 - AluSx SINE Alu 0 312 16 371 385 39 8 chr2 73692740 73692974 -176994880 - L2 LINE L2 -2926 388 148 304 305 75 57 chr2 73693435 73693714 -176994140 - MLT1K LTR MaLR -181 407 124 2305 124 0 0 chr2 73694055 73694362 -176993492 + AluSq SINE Alu 1 307 -6 1982 158 3 10 chr2 73694452 73694756 -176993098 + AluJb SINE Alu 1 302 -10 377 294 114 38 chr2 73694766 73694950 -176992904 + L1ME4a LINE L1 3682 3879 -2267 438 305 109 40 chr2 73694950 73695337 -176992517 + L2 LINE L2 2682 3092 -180 369 211 122 0 chr2 73695364 73695454 -176992400 - MER5A DNA MER1_type -80 109 9 2408 89 3 16 chr2 73695494 73695673 -176992181 - AluSp SINE Alu -3 310 130 315 0 0 0 chr2 73695673 73695708 -176992146 + (TA)n Simple_repeat Simple_repeat 1 35 0 2214 103 0 0 chr2 73695708 73695989 -176991865 - AluSc SINE Alu -28 281 1 2408 89 3 16 chr2 73695989 73696122 -176991732 - AluSp SINE Alu -181 132 1 682 219 12 44 chr2 73696136 73696296 -176991558 + L2 LINE L2 3159 3313 0 342 290 89 24 chr2 73696296 73696420 -176991434 + L1ME4a LINE L1 3880 4011 -2135 326 329 143 19 chr2 73696413 73696778 -176991076 + L1ME4a LINE L1 4724 5133 -1013 * 510 247 123 31 chr2 73696811 73696922 -176990932 + L1ME4a LINE L1 5208 5340 -806 2102 91 3 79 chr2 73696922 73697251 -176990603 + AluSc SINE Alu 1 304 -5 510 247 123 31 chr2 73697251 73697301 -176990553 + L1ME4a LINE L1 5340 5384 -762 1129 181 47 80 chr2 73697316 73697702 -176990152 + MLT1B LTR MaLR 18 390 0 357 322 81 41 chr2 73697705 73698221 -176989633 + L1ME4a LINE L1 5381 5917 -204 2157 88 14 21 chr2 73698394 73698518 -176989336 + AluSx SINE Alu 15 138 -174 2639 39 3 3 chr2 73698518 73698826 -176989028 + AluY SINE Alu 3 310 -1 2157 88 14 21 chr2 73698826 73698985 -176988869 + AluSx SINE Alu 138 296 -16 1604 184 17 27 chr2 73699884 73700183 -176987671 - AluJo SINE Alu -16 296 1 278 98 0 0 chr2 73700192 73700233 -176987621 - MER82 DNA MER2_type -612 41 1 2561 50 3 0 chr2 73700282 73700583 -176987271 + AluY SINE Alu 1 302 -9 180 0 0 0 chr2 73700921 73700941 -176986913 + (A)n Simple_repeat Simple_repeat 1 20 0 305 206 82 55 chr2 73701892 73701965 -176985889 - L1M4 LINE L1 -1510 4636 4562 2119 134 0 0 chr2 73701970 73702260 -176985594 + AluSx SINE Alu 1 290 -22 600 180 0 94 chr2 73702292 73702420 -176985434 + AluJo SINE Alu 127 242 -70 2251 95 7 7 chr2 73702575 73702880 -176984974 - AluSq SINE Alu -8 305 1 391 252 147 0 chr2 73703795 73703938 -176983916 - MER20B DNA MER1_type -2 781 618 242 147 13 40 chr2 73703939 73704014 -176983840 + A-rich Low_complexity Low_complexity 5 77 0 355 271 93 16 chr2 73704027 73704156 -176983698 - MER90 LTR ERV1 0 575 437 1978 155 3 0 chr2 73704161 73704452 -176983402 - AluJb SINE Alu -20 292 1 587 314 93 101 chr2 73704455 73704495 -176983359 - L1M4 LINE L1 -985 5161 5122 1965 143 68 34 chr2 73704495 73704846 -176983008 + MLT1A1 LTR MaLR 3 365 0 587 314 93 101 chr2 73704846 73704946 -176982908 - L1M4 LINE L1 -1024 5122 5023 2331 96 0 0 chr2 73704946 73705238 -176982616 - AluSc SINE Alu -17 292 1 587 314 93 101 chr2 73705238 73705369 -176982485 - L1M4 LINE L1 -1123 5023 4892 2288 130 0 0 chr2 73705369 73705676 -176982178 - AluSx SINE Alu -5 307 1 587 314 93 101 chr2 73705676 73705912 -176981942 - L1M4 LINE L1 -1254 4892 4656 2428 63 7 0 chr2 73705912 73706211 -176981643 - AluY SINE Alu -10 301 1 2118 145 0 0 chr2 73706213 73706503 -176981351 - AluSx SINE Alu -22 290 1 587 314 93 101 chr2 73706503 73706625 -176981229 - L1M4 LINE L1 -1491 4655 4531 1082 144 9 113 chr2 73706686 73706908 -176980946 + AluJo SINE Alu 102 300 -12 2113 117 7 0 chr2 73707391 73707681 -176980173 - AluSx SINE Alu -20 292 1 26 0 0 0 chr2 73707684 73707710 -176980144 + AT_rich Low_complexity Low_complexity 1 26 0 1763 146 9 53 chr2 73707711 73707832 -176980022 + AluJb SINE Alu 1 126 -186 252 59 0 0 chr2 73707832 73707866 -176979988 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1763 146 9 53 chr2 73707866 73708066 -176979788 + AluJb SINE Alu 126 308 -4 27 0 0 0 chr2 73708342 73708369 -176979485 + AT_rich Low_complexity Low_complexity 1 27 0 2063 139 0 0 chr2 73708369 73708657 -176979197 - AluSx SINE Alu -24 288 1 897 152 0 0 chr2 73708697 73708829 -176979025 + FLAM_C SINE Alu 7 138 -5 224 236 112 0 chr2 73709012 73709101 -176978753 + MIR3 SINE MIR 89 187 -21 273 217 0 0 chr2 73709933 73710016 -176977838 + (CA)n Simple_repeat Simple_repeat 1 83 0 389 56 56 0 chr2 73710189 73710243 -176977611 - Alu SINE Alu -2 300 244 770 143 8 16 chr2 73710269 73710395 -176977459 - FLAM_C SINE Alu -17 126 2 366 259 129 14 chr2 73710432 73710571 -176977283 - MER5A DNA MER1_type 0 189 35 453 175 124 93 chr2 73710906 73711100 -176976754 + MER112 DNA MER1_type 25 224 -36 593 217 48 36 chr2 73711101 73711267 -176976587 - MLT1F LTR MaLR -5 537 370 591 212 252 15 chr2 73711297 73711557 -176976297 - MLT1G1 LTR MaLR -294 296 1 375 260 164 4 chr2 73712080 73712349 -176975505 - L2 LINE L2 -1113 2201 1890 2081 114 13 13 chr2 73712552 73712858 -176974996 + AluSx SINE Alu 1 306 -6 271 243 54 0 chr2 73713556 73713630 -176974224 + MIR SINE MIR 73 150 -112 2130 110 28 3 chr2 73713702 73713984 -176973870 - AluSx SINE Alu -23 289 1 197 185 185 37 chr2 73714560 73714614 -176973240 + L2 LINE L2 3208 3269 -44 201 74 0 0 chr2 73714664 73714691 -176973163 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2491 81 3 3 chr2 73715404 73715712 -176972142 - AluSp SINE Alu -5 308 1 655 281 119 8 chr2 73716043 73716296 -176971558 + LTR33 LTR ERVL 218 498 -23 1654 147 71 0 chr2 73716421 73716687 -176971167 - AluJo SINE Alu -27 285 1 590 155 10 19 chr2 73717283 73717386 -176970468 + Tigger5 DNA MER2_type 3 104 -2219 1717 134 11 0 chr2 73717640 73717902 -176969952 + Tigger5 DNA MER2_type 2058 2322 -1 2972 158 14 14 chr2 73718051 73718543 -176969311 - MLT1D LTR MaLR -13 492 1 1492 216 96 42 chr2 73718970 73719447 -176968407 + L1ME3A LINE L1 5668 6170 0 274 256 160 45 chr2 73719513 73719563 -176968291 + L1MC/D LINE L1 4462 4505 -1641 1744 198 84 5 chr2 73719563 73719903 -176967951 + MLT2D LTR ERVL 2 377 -37 414 39 0 0 chr2 73719903 73719955 -176967899 + (CA)n Simple_repeat Simple_repeat 2 53 0 1744 198 84 5 chr2 73719955 73719997 -176967857 + MLT2D LTR ERVL 377 414 0 274 256 160 45 chr2 73719997 73720102 -176967752 + L1MC/D LINE L1 4505 4635 -1511 5350 151 26 38 chr2 73720248 73720383 -176967471 - L1MA9 LINE L1 -5 6307 6172 276 100 0 0 chr2 73720383 73720423 -176967431 + (TG)n Simple_repeat Simple_repeat 1 40 0 5350 151 26 38 chr2 73720423 73721230 -176966624 - L1MA9 LINE L1 -140 6172 5386 731 171 31 8 chr2 73721230 73721359 -176966495 - FLAM_A SINE Alu -1 132 1 5350 151 26 38 chr2 73721359 73721882 -176965972 - L1MA9 LINE L1 -926 5386 4859 615 283 83 57 chr2 73721948 73722222 -176965632 + L1MC/D LINE L1 4878 5144 -1116 2065 124 28 0 chr2 73722222 73722505 -176965349 + AluSq SINE Alu 1 291 -22 615 283 83 57 chr2 73722505 73723085 -176964769 + L1MC/D LINE L1 5144 5757 -503 237 196 0 0 chr2 73723137 73723193 -176964661 + CT-rich Low_complexity Low_complexity 2 57 0 227 183 14 14 chr2 73723366 73723437 -176964417 - L1MB7 LINE L1 0 6184 6114 1321 154 106 0 chr2 73723442 73723669 -176964185 + AluJb SINE Alu 38 288 -24 2350 72 7 7 chr2 73723763 73724069 -176963785 - AluY SINE Alu -5 306 1 927 216 33 5 chr2 73724072 73724285 -176963569 - MLT1C LTR MaLR -59 408 190 216 279 12 58 chr2 73724444 73724530 -176963324 + GA-rich Low_complexity Low_complexity 4 85 0 468 273 131 22 chr2 73726437 73726620 -176961234 + MLT1K LTR MaLR 39 241 -347 525 266 79 39 chr2 73726874 73727077 -176960777 + MLT1K LTR MaLR 378 588 0 443 349 9 24 chr2 73727255 73727467 -176960387 - MIR SINE MIR -38 224 16 203 355 66 16 chr2 73727631 73727752 -176960102 - MIR SINE MIR -77 185 59 1783 164 3 20 chr2 73728878 73729171 -176958683 - AluJo SINE Alu -24 288 1 5369 20 7 0 chr2 73729419 73730023 -176957831 - L1PA3 LINE L1 0 6155 5548 548 306 98 33 chr2 73730176 73730572 -176957282 - L1ME LINE L1 -348 5773 5352 300 191 43 142 chr2 73730670 73730811 -176957043 - MLT1K LTR MaLR -346 242 116 2241 112 0 0 chr2 73731468 73731771 -176956083 - AluSx SINE Alu -9 303 1 369 287 75 14 chr2 73731906 73732188 -176955666 + L1ME4a LINE L1 5666 5964 -157 2218 100 7 3 chr2 73732234 73732523 -176955331 + AluSg SINE Alu 1 290 -20 1741 169 3 7 chr2 73732726 73733010 -176954844 - AluJo SINE Alu -29 283 1 327 241 25 13 chr2 73733024 73733103 -176954751 + L2 LINE L2 3193 3272 0 464 319 14 0 chr2 73734042 73734180 -176953674 - L2 LINE L2 -8 3264 3125 363 192 39 0 chr2 73734414 73734492 -176953362 - MER5A DNA MER1_type -100 89 9 683 210 33 72 chr2 73734508 73734689 -176953165 - MER5B DNA MER1_type 0 178 5 600 158 105 15 chr2 73734939 73735072 -176952782 - MLT1H LTR MaLR -317 232 88 808 157 8 0 chr2 73735084 73735205 -176952649 - FLAM_C SINE Alu -21 122 1 258 152 109 0 chr2 73735207 73735253 -176952601 - MLT1H LTR MaLR -444 105 55 2237 108 14 0 chr2 73736158 73736445 -176951409 - AluSx SINE Alu -21 291 1 1140 129 0 18 chr2 73737058 73737228 -176950626 - AluSg/x SINE Alu -11 299 133 714 200 35 174 chr2 73737491 73737801 -176950053 - MLT1A2 LTR MaLR -107 267 1 2417 151 32 64 chr2 73738000 73738502 -176949352 + MER66B LTR ERV1 1 486 0 1296 112 6 0 chr2 73738792 73738962 -176948892 + AluSx SINE Alu 1 171 -141 301 270 6 61 chr2 73739668 73739831 -176948023 - L1ME4a LINE L1 -9 6112 5959 1075 115 6 13 chr2 73739856 73740013 -176947841 - AluSg/x SINE Alu -20 292 137 2181 123 3 3 chr2 73740022 73740323 -176947531 - AluSq SINE Alu -12 301 1 1189 193 63 37 chr2 73740452 73740800 -176947054 - LTR37A LTR ERV1 -2 424 68 249 213 75 25 chr2 73740951 73741031 -176946823 + MIR3 SINE MIR 96 179 -29 1013 129 0 0 chr2 73741220 73741352 -176946502 + AluSx SINE Alu 1 132 -180 374 211 48 39 chr2 73741373 73741477 -176946377 - LTR37A LTR ERV1 -229 197 93 1106 148 0 37 chr2 73741478 73741667 -176946187 + AluSx SINE Alu 120 301 -11 1646 174 26 74 chr2 73742045 73742435 -176945419 - L1MB5 LINE L1 -8 6166 5796 2551 168 47 2 chr2 73742443 73742913 -176944941 - L1MB5 LINE L1 -1938 4208 3718 1507 181 39 89 chr2 73742991 73743427 -176944427 - MLT2D LTR ERVL 0 414 1 1602 79 5 15 chr2 73743956 73744158 -176943696 + AluSx SINE Alu 1 200 -112 2322 118 65 78 chr2 73744256 73744449 -176943405 + MSTC LTR MaLR 1 195 -233 2176 108 0 14 chr2 73744449 73744746 -176943108 - AluSq SINE Alu -18 295 3 2322 118 65 78 chr2 73744746 73744986 -176942868 + MSTC LTR MaLR 195 428 0 1757 145 10 38 chr2 73745452 73745742 -176942112 - AluJo SINE Alu -25 287 6 4218 138 26 28 chr2 73745759 73746238 -176941616 - L1MA9 LINE L1 -2 6310 5832 1698 199 0 0 chr2 73746238 73746529 -176941325 - AluJb SINE Alu -21 291 1 4218 138 26 28 chr2 73746529 73746576 -176941278 - L1MA9 LINE L1 -480 5832 5786 2063 134 3 0 chr2 73746576 73746866 -176940988 - AluSx SINE Alu -21 291 1 4218 138 26 28 chr2 73746866 73747100 -176940754 - L1MA9 LINE L1 -526 5786 5550 1889 136 7 36 chr2 73748414 73748716 -176939138 - AluJo SINE Alu -17 295 3 3510 154 102 79 chr2 73748729 73749620 -176938234 - L1MB8 LINE L1 -1 6177 5266 1635 182 0 18 chr2 73749620 73749906 -176937948 - AluJo SINE Alu -31 281 1 3555 188 44 54 chr2 73749969 73750525 -176937329 - L1MB5 LINE L1 -1 6173 5613 326 78 0 20 chr2 73750525 73750576 -176937278 + (CA)n Simple_repeat Simple_repeat 2 51 0 3555 188 44 54 chr2 73750576 73751323 -176936531 - L1MB5 LINE L1 -561 5613 4479 4889 153 32 31 chr2 73753008 73753118 -176934736 + MER4D LTR ERV1 1 109 -794 2979 93 37 9 chr2 73753118 73753550 -176934304 - MLT2A1 LTR ERVL 0 444 1 4889 153 32 31 chr2 73753550 73753568 -176934286 + MER4D LTR ERV1 109 125 -778 1652 140 207 11 chr2 73753568 73753926 -176933928 + MSTA LTR MaLR 1 428 0 4889 153 32 31 chr2 73753926 73754698 -176933156 + MER4D LTR ERV1 125 903 0 1835 150 7 26 chr2 73754826 73755133 -176932721 + AluJo SINE Alu 1 301 -11 1737 145 6 66 chr2 73755734 73756052 -176931802 - AluJo SINE Alu -13 299 1 2219 153 16 11 chr2 73756872 73757217 -176930637 + MLT1B LTR MaLR 1 418 -49 1853 138 58 0 chr2 73757217 73757493 -176930361 + AluJb SINE Alu 1 292 -20 2219 153 16 11 chr2 73757493 73757536 -176930318 + MLT1B LTR MaLR 418 459 -8 349 325 38 19 chr2 73757743 73757900 -176929954 + MIR3 SINE MIR 30 189 -19 609 266 80 30 chr2 73760296 73760495 -176927359 + MIR SINE MIR 2 210 -52 425 260 67 0 chr2 73760833 73760937 -176926917 - L2 LINE L2 -7 3306 3196 362 263 36 3 chr2 73761555 73761677 -176926177 + MIR SINE MIR 16 146 -62 472 301 78 6 chr2 73762818 73762984 -176924870 - MIR SINE MIR -72 190 13 942 157 7 9 chr2 73763462 73763766 -176924088 + MLT1A1 LTR MaLR 1 365 0 862 168 78 11 chr2 73764081 73764272 -176923582 + L1MC3 LINE L1 6933 7136 -649 1476 237 103 22 chr2 73764272 73764543 -176923311 - MLT1D LTR MaLR -3 502 255 6613 91 31 0 chr2 73764543 73765524 -176922330 - L1PA11 LINE L1 -7 6167 5170 1476 237 103 22 chr2 73765524 73765716 -176922138 - MLT1D LTR MaLR -250 255 1 1836 152 3 20 chr2 73765716 73766019 -176921835 + L1MC3 LINE L1 7129 7426 -359 2329 95 7 7 chr2 73766445 73766749 -176921105 + AluSx SINE Alu 1 304 -8 1349 237 107 16 chr2 73766819 73767322 -176920532 + MLT1G1 LTR MaLR 1 593 -2 516 312 116 50 chr2 73767428 73767903 -176919951 + L2 LINE L2 458 963 -2351 776 148 0 9 chr2 73767930 73768045 -176919809 - AluJb SINE Alu -21 291 178 606 302 49 4 chr2 73768046 73768271 -176919583 - MIR SINE MIR -13 249 15 254 341 37 0 chr2 73769108 73769190 -176918664 + L2 LINE L2 3188 3272 0 499 154 11 11 chr2 73769675 73769766 -176918088 - MER5B DNA MER1_type 0 178 88 688 204 0 0 chr2 73769766 73769874 -176917980 - FLAM_C SINE Alu -34 109 2 579 232 0 0 chr2 73769875 73769987 -176917867 + MER58B DNA MER1_type 223 334 -7 369 240 0 0 chr2 73769987 73770062 -176917792 + MER5B DNA MER1_type 104 178 0 1207 196 77 61 chr2 73770213 73770330 -176917524 - MER58B DNA MER1_type -2079 341 227 1895 158 0 0 chr2 73770330 73770609 -176917245 + AluJb SINE Alu 1 279 -33 342 115 0 0 chr2 73770611 73770663 -176917191 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 1207 196 77 61 chr2 73770663 73770854 -176917000 - MER58B DNA MER1_type -2193 227 25 869 249 67 8 chr2 73771453 73771706 -176916148 + MLT1L LTR MaLR 335 602 -13 205 181 28 97 chr2 73771865 73771937 -176915917 - L3 LINE CR1 -70 1507 1441 541 241 51 28 chr2 73772180 73772381 -176915473 - MLT1G LTR MaLR 0 590 273 1262 256 143 15 chr2 73772381 73772861 -176914993 + L2 LINE L2 2770 3308 -5 513 204 139 7 chr2 73772935 73773072 -176914782 + L1MB1 LINE L1 4341 4495 -1651 4499 199 112 7 chr2 73773180 73774228 -176913626 + L1PB1 LINE L1 6 1163 -5700 1383 173 20 0 chr2 73774234 73774482 -176913372 + L1PB1 LINE L1 1321 1573 -5290 * 3807 150 67 10 chr2 73774478 73775273 -176912581 + L1PB1 LINE L1 2323 3169 -3693 2729 125 68 70 chr2 73775273 73775802 -176912052 + LTR14B LTR ERVK 17 544 -64 9014 164 20 19 chr2 73775803 73776800 -176911054 + L1PB1 LINE L1 4087 5082 -1785 2375 88 0 10 chr2 73776800 73777107 -176910747 + AluSc SINE Alu 1 304 -5 9014 164 20 19 chr2 73777107 73777887 -176909967 + L1PB1 LINE L1 5082 5860 -1007 2294 97 0 0 chr2 73777887 73778197 -176909657 + AluSq SINE Alu 1 310 -3 9014 164 20 19 chr2 73778197 73779206 -176908648 + L1PB1 LINE L1 5860 6867 0 4396 163 72 7 chr2 73779193 73780774 -176907080 + L1MB1 LINE L1 4489 6157 -11 * 186 133 0 0 chr2 73780777 73780807 -176907047 + (TA)n Simple_repeat Simple_repeat 1 30 0 422 362 17 11 chr2 73780906 73781083 -176906771 + L3 LINE CR1 1136 1313 -264 237 212 30 30 chr2 73781113 73781179 -176906675 - Charlie7 DNA MER1_type -32 2580 2515 * 249 306 90 15 chr2 73781178 73781312 -176906542 - Charlie7 DNA MER1_type -2466 146 3 1167 281 36 22 chr2 73781554 73782002 -176905852 - LTR16B LTR ERVL -2 462 9 297 265 0 36 chr2 73782303 73782386 -176905468 + L3 LINE CR1 1369 1448 -129 228 325 36 0 chr2 73782523 73782606 -176905248 + MER5B DNA MER1_type 39 124 -54 194 189 0 0 chr2 73782638 73782675 -176905179 + L3 LINE CR1 1537 1573 -4 279 271 24 24 chr2 73782702 73782787 -176905067 + MIR SINE MIR 76 160 -102 186 152 0 0 chr2 73782901 73782934 -176904920 + L2 LINE L2 3275 3307 -6 944 122 0 50 chr2 73783439 73783578 -176904276 - FLAM_C SINE Alu -1 132 1 2592 203 119 111 chr2 73784150 73784758 -176903096 + Charlie7 DNA MER1_type 7 609 -2003 2100 145 0 3 chr2 73784758 73785068 -176902786 + AluSg SINE Alu 1 309 -1 2592 203 119 111 chr2 73785068 73785272 -176902582 + Charlie7 DNA MER1_type 609 810 -1802 1271 181 3 104 chr2 73785272 73785598 -176902256 - AluJb SINE Alu -19 293 1 2592 203 119 111 chr2 73785598 73785947 -176901907 + Charlie7 DNA MER1_type 810 1178 -1434 511 246 46 23 chr2 73785960 73786135 -176901719 + L1MCc LINE L1 36 214 -6209 777 244 61 28 chr2 73786145 73786358 -176901496 + L1MCc LINE L1 252 471 -5952 1475 223 189 3 chr2 73786534 73787192 -176900662 + L1MCc LINE L1 2614 3339 -3602 3464 234 100 13 chr2 73787201 73788319 -176899535 + Charlie7 DNA MER1_type 1163 2377 -235 2307 133 125 8 chr2 73788604 73788987 -176898867 - MSTA LTR MaLR 0 428 1 345 298 46 8 chr2 73789130 73789261 -176898593 - MIR SINE MIR -79 183 48 647 106 41 73 chr2 73791266 73791335 -176896519 + L1MA2 LINE L1 6186 6251 -53 1278 82 16 22 chr2 73791335 73791515 -176896339 + L1PA10 LINE L1 5987 6168 0 647 106 41 73 chr2 73791515 73791568 -176896286 + L1MA2 LINE L1 6251 6304 0 1217 157 16 5 chr2 73791758 73791943 -176895911 - MER5A DNA MER1_type 0 189 3 861 217 77 145 chr2 73792040 73792667 -176895187 - L1MC4a LINE L1 -220 5901 5317 1419 168 42 68 chr2 73792920 73793376 -176894478 - MSTD LTR MaLR -4 424 1 208 318 147 33 chr2 73794097 73794308 -176893546 + L2 LINE L2 2440 2674 -640 219 139 0 0 chr2 73794319 73794355 -176893499 + (TTCA)n Simple_repeat Simple_repeat 2 37 0 282 269 236 9 chr2 73794560 73794772 -176893082 + MLT1L LTR MaLR 23 282 -333 282 211 28 0 chr2 73794796 73794867 -176892987 - Charlie8 DNA MER1_type -2226 191 119 227 280 50 40 chr2 73795088 73795103 -176892751 - L1ME4a LINE L1 -57 6064 6051 2240 118 0 13 chr2 73795103 73795417 -176892437 + AluSx SINE Alu 1 310 -2 227 280 50 40 chr2 73795417 73795501 -176892353 - L1ME4a LINE L1 -70 6051 5964 676 254 103 0 chr2 73796638 73796823 -176891031 - MIR SINE MIR -13 249 46 523 246 39 38 chr2 73797185 73797213 -176890641 + L1M2 LINE L1 5174 5200 -1014 1865 81 23 12 chr2 73797213 73797472 -176890382 + L1MA2 LINE L1 6043 6304 0 240 35 0 0 chr2 73797477 73797506 -176890348 + (TA)n Simple_repeat Simple_repeat 1 29 0 523 246 39 38 chr2 73797506 73797848 -176890006 + L1M2 LINE L1 5203 5561 -653 772 235 136 70 chr2 73797848 73797951 -176889903 + MLT1L LTR MaLR 144 239 -376 1623 156 69 24 chr2 73797951 73798239 -176889615 + AluJb SINE Alu 1 301 -11 772 235 136 70 chr2 73798239 73798561 -176889293 + MLT1L LTR MaLR 239 597 -18 560 297 59 26 chr2 73798580 73798853 -176889001 + L1ME4a LINE L1 5605 5886 -235 2416 75 7 7 chr2 73798904 73799210 -176888644 - AluSx SINE Alu -6 306 1 509 296 86 70 chr2 73799275 73799704 -176888150 - Charlie8 DNA MER1_type -17 2400 1965 10287 17 2 0 chr2 73799719 73801402 -176886452 - L1PA2 LINE L1 -260 5895 4209 2233 32 0 0 chr2 73801402 73801646 -176886208 + L1PA2 LINE L1 5907 6155 0 961 141 57 0 chr2 73801646 73801828 -176886026 + ALR/Alpha Satellite centromeric 1 192 -73 * 3212 278 66 18 chr2 73801813 73802912 -176884942 - Charlie8 DNA MER1_type -454 1963 812 5080 180 48 44 chr2 73803055 73804379 -176883475 - L1MB7 LINE L1 -10 6174 4856 1032 20 0 91 chr2 73804379 73804576 -176883278 + (CCTAT)n Simple_repeat Simple_repeat 2 180 0 5080 180 48 44 chr2 73804576 73804628 -176883226 - L1MB7 LINE L1 -1328 4856 4806 1284 10 0 70 chr2 73804628 73805014 -176882840 + (CCTAT)n Simple_repeat Simple_repeat 1 359 0 279 79 0 0 chr2 73805014 73805052 -176882802 + (CCCTA)n Simple_repeat Simple_repeat 3 40 0 5080 180 48 44 chr2 73805052 73805755 -176882099 - L1MB7 LINE L1 -1377 4807 4089 835 237 98 14 chr2 73806407 73806622 -176881232 - MIR SINE MIR -28 234 2 901 294 59 33 chr2 73807126 73807705 -176880149 - L1MEc LINE L1 -3935 2461 1868 2205 107 3 0 chr2 73807721 73808019 -176879835 - AluY SINE Alu -12 299 1 233 146 55 0 chr2 73808048 73808103 -176879751 + (TTTAA)n Simple_repeat Simple_repeat 3 60 0 366 245 10 31 chr2 73808165 73808263 -176879591 + MIR SINE MIR 113 208 -54 395 205 112 75 chr2 73809015 73809176 -176878678 - MER5A DNA MER1_type -22 167 1 21 57 0 0 chr2 73810476 73810511 -176877343 + AT_rich Low_complexity Low_complexity 1 35 0 416 109 19 45 chr2 73810666 73810822 -176877032 + (TA)n Simple_repeat Simple_repeat 1 152 0 322 261 87 68 chr2 73810925 73810988 -176876866 - L1ME4a LINE L1 -202 5919 5859 1525 113 198 8 chr2 73810988 73811245 -176876609 - AluSg1 SINE Alu -3 306 1 322 261 87 68 chr2 73811245 73811388 -176876466 - L1ME4a LINE L1 -262 5859 5709 303 269 67 31 chr2 73811389 73811582 -176876272 + L1ME4a LINE L1 5526 5725 -396 860 148 7 0 chr2 73811704 73811839 -176876015 + FLAM_C SINE Alu 1 136 -7 402 256 17 11 chr2 73811848 73812028 -176875826 + L1ME3A LINE L1 5771 5951 -219 418 304 74 36 chr2 73812361 73812887 -176874967 + L1ME3 LINE L1 3603 4148 -1998 1726 223 53 11 chr2 73812982 73813418 -176874436 + MER97a DNA MER1_type? 15 468 -426 2686 243 42 13 chr2 73813640 73814298 -176873556 + L1ME3 LINE L1 5258 5947 -215 1666 133 40 90 chr2 73814298 73814652 -176873202 + MER44D DNA MER2_type 2 607 -2 2686 243 42 13 chr2 73814652 73814831 -176873023 + L1ME3 LINE L1 5947 6119 -43 2467 77 3 7 chr2 73816978 73817288 -176870566 - AluSp SINE Alu -4 309 1 219 78 78 49 chr2 73817382 73817524 -176870330 + (TTATA)n Simple_repeat Simple_repeat 2 147 0 356 73 0 0 chr2 73817679 73817734 -176870120 + L1MA3 LINE L1 6251 6305 0 466 350 96 20 chr2 73818816 73819256 -176868598 + L1ME4a LINE L1 4748 5220 -926 328 198 47 0 chr2 73819291 73819377 -176868477 + L1MB4 LINE L1 6091 6180 0 863 276 18 45 chr2 73819497 73819896 -176867958 + L1ME4a LINE L1 5282 5665 -456 2354 86 13 0 chr2 73819896 73820200 -176867654 + AluSp SINE Alu 1 308 -5 863 276 18 45 chr2 73820200 73820311 -176867543 + L1ME4a LINE L1 5665 5778 -343 63 87 0 0 chr2 73820319 73820480 -176867374 + AT_rich Low_complexity Low_complexity 1 161 0 392 210 164 32 chr2 73820511 73820792 -176867062 + L1ME4a LINE L1 5793 6110 -11 201 316 0 0 chr2 73821108 73821165 -176866689 - MIR SINE MIR -57 151 95 24 0 0 0 chr2 73821359 73821383 -176866471 + AT_rich Low_complexity Low_complexity 1 24 0 374 202 192 10 chr2 73821587 73821691 -176866163 - L1MB7 LINE L1 -9 6175 6053 1850 138 29 42 chr2 73821753 73822064 -176865790 - AluJb SINE Alu 0 312 6 1556 159 179 0 chr2 73822155 73822463 -176865391 + MLT1A1 LTR MaLR 3 365 0 234 295 0 0 chr2 73824637 73824698 -176863156 + (TA)n Simple_repeat Simple_repeat 2 62 0 324 210 100 20 chr2 73826007 73826107 -176861747 + L1ME LINE L1 5323 5427 -694 823 278 156 9 chr2 73826883 73827210 -176860644 + L2 LINE L2 2273 2647 -667 2082 137 3 3 chr2 73827390 73827690 -176860164 + AluSx SINE Alu 1 300 -12 232 235 0 0 chr2 73827699 73827750 -176860104 + MER66A LTR ERV1 287 337 -141 2137 222 60 8 chr2 73827833 73828369 -176859485 - MER97c DNA MER1_type? -512 578 15 418 304 74 36 chr2 73828464 73828990 -176858864 - L1M4 LINE L1 -1998 4148 3603 402 256 17 11 chr2 73829323 73829503 -176858351 - L1ME3A LINE L1 -219 5951 5771 887 162 0 0 chr2 73829512 73829648 -176858206 - FLAM_C SINE Alu -7 136 1 501 261 105 2 chr2 73829664 73829873 -176857981 - L1ME3A LINE L1 -487 5755 5508 631 244 160 21 chr2 73829874 73830206 -176857648 - MLT1J1 LTR MaLR -24 422 45 466 91 35 203 chr2 73832743 73832814 -176855040 + L1MA2 LINE L1 6186 6223 -81 1187 69 19 6 chr2 73832814 73832974 -176854880 + L1PA10 LINE L1 5991 6152 -16 466 91 35 203 chr2 73832974 73833045 -176854809 + L1MA2 LINE L1 6223 6304 0 1134 157 16 5 chr2 73833235 73833420 -176854434 - MER5A DNA MER1_type 0 189 3 671 218 84 135 chr2 73833597 73834144 -176853710 - L1MC4a LINE L1 -1973 5835 5317 187 342 36 9 chr2 73834250 73834361 -176853493 + L3b LINE CR1 1121 1234 -349 1310 165 44 66 chr2 73834409 73834853 -176853001 - MSTD LTR MaLR -13 415 1 208 318 147 33 chr2 73835574 73835785 -176852069 + L2 LINE L2 2440 2674 -640 219 139 0 0 chr2 73835796 73835832 -176852022 + (TTCA)n Simple_repeat Simple_repeat 2 37 0 243 283 91 0 chr2 73836093 73836192 -176851662 + MLT1L LTR MaLR 91 198 -417 254 211 28 0 chr2 73836273 73836344 -176851510 - Charlie8 DNA MER1_type -2226 191 119 2240 128 0 3 chr2 73836580 73836893 -176850961 + AluSx SINE Alu 1 312 0 680 254 103 0 chr2 73838114 73838299 -176849555 - MIR SINE MIR -13 249 46 1728 77 24 0 chr2 73838702 73838948 -176848906 + L1MA2 LINE L1 6053 6304 0 240 35 0 0 chr2 73838953 73838982 -176848872 + (TA)n Simple_repeat Simple_repeat 1 29 0 443 249 71 33 chr2 73838991 73839324 -176848530 + L1M2 LINE L1 5211 5561 -655 612 230 129 46 chr2 73839361 73839427 -176848427 + MLT1L LTR MaLR 71 130 -485 1640 156 69 24 chr2 73839427 73839715 -176848139 + AluJb SINE Alu 1 301 -11 612 230 129 46 chr2 73839715 73840037 -176847817 + MLT1L LTR MaLR 130 597 -18 444 308 55 22 chr2 73840056 73840329 -176847525 + L1ME4a LINE L1 5605 5886 -235 2411 75 7 7 chr2 73840380 73840686 -176847168 - AluSx SINE Alu -6 306 1 370 303 86 70 chr2 73840751 73841180 -176846674 - Charlie8 DNA MER1_type -17 2400 1965 2744 29 6 0 chr2 73841195 73841537 -176846317 - L1PA3 LINE L1 -260 5895 5552 625 209 12 58 chr2 73841539 73841711 -176846143 + MIR SINE MIR 99 262 0 1972 127 68 0 chr2 73841900 73842192 -176845662 + AluSx SINE Alu 1 312 0 22 35 0 0 chr2 73843280 73843309 -176844545 + AT_rich Low_complexity Low_complexity 1 29 0 419 169 67 0 chr2 73843318 73843407 -176844447 - L1MA8 LINE L1 -32 6259 6165 * 1436 153 13 71 chr2 73843383 73843761 -176844093 + L1 LINE L1 4935 5290 -856 790 253 86 3 chr2 73844327 73844621 -176843233 + MER33 DNA MER1_type 1 309 -15 208 286 130 13 chr2 73844939 73845016 -176842838 + MER5A DNA MER1_type 7 92 -97 333 172 182 0 chr2 73845024 73845123 -176842731 - MLT1I LTR MaLR -4 405 289 233 258 16 0 chr2 73845225 73845287 -176842567 - MLT1I LTR MaLR -275 134 72 286 264 69 11 chr2 73845356 73845443 -176842411 + MER5B DNA MER1_type 87 178 0 875 199 12 12 chr2 73845455 73845626 -176842228 - MER5B DNA MER1_type -5 173 3 1122 302 74 16 chr2 73847270 73847790 -176840064 + L2 LINE L2 2763 3313 0 421 264 190 23 chr2 73847819 73847993 -176839861 - MIR SINE MIR -36 226 24 22 35 0 0 chr2 73848280 73848309 -176839545 + AT_rich Low_complexity Low_complexity 1 29 0 582 143 48 40 chr2 73848667 73848793 -176839061 + L1MB1 LINE L1 5992 6118 -50 581 281 102 31 chr2 73849640 73850024 -176837830 + L1ME LINE L1 5255 5665 -456 2024 190 91 13 chr2 73850147 73850610 -176837244 + MLT1D LTR MaLR 7 505 0 191 214 429 0 chr2 73850676 73850746 -176837108 + MIR SINE MIR 35 134 -74 345 214 61 61 chr2 73851911 73852042 -176835812 + MIR SINE MIR 23 153 -109 699 226 48 30 chr2 73854421 73854589 -176833265 + MER5B DNA MER1_type 1 171 -7 497 255 125 0 chr2 73854611 73854767 -176833087 - MER5A DNA MER1_type -7 182 4 402 227 45 38 chr2 73855372 73855504 -176832350 - MIR3 SINE MIR -65 143 11 566 320 101 58 chr2 73855693 73856180 -176831674 + L1ME4a LINE L1 4498 5018 -1128 539 281 101 34 chr2 73856378 73856852 -176831002 + L1ME4a LINE L1 5314 5830 -291 2151 127 19 22 chr2 73856852 73857214 -176830640 + MER46B DNA MER2_type 1 236 0 539 281 101 34 chr2 73857214 73857252 -176830602 + L1ME4a LINE L1 5830 5864 -257 272 246 49 8 chr2 73857308 73857430 -176830424 + L1ME4a LINE L1 5984 6110 -11 2335 73 3 3 chr2 73857458 73857747 -176830107 + AluY SINE Alu 1 289 -22 1600 179 58 3 chr2 73857761 73858052 -176829802 + AluJo SINE Alu 4 310 -2 2057 81 4 0 chr2 73859014 73859272 -176828582 + AluSg SINE Alu 31 289 -21 374 223 89 27 chr2 73859622 73859734 -176828120 - LTR67 LTR ERVL -3 554 436 371 234 76 95 chr2 73861293 73861451 -176826403 + L3 LINE CR1 348 502 -1075 968 335 46 48 chr2 73861586 73862088 -176825766 + L3 LINE CR1 547 1047 -530 813 306 16 16 chr2 73862092 73862350 -176825504 + MIR SINE MIR 5 262 0 679 206 142 15 chr2 73862476 73862680 -176825174 - MLT1F LTR MaLR 0 542 313 5047 184 52 25 chr2 73862948 73864269 -176823585 - L1MB7 LINE L1 -10 6174 4890 1620 0 0 0 chr2 73864269 73864472 -176823382 + (CTATT)n Simple_repeat Simple_repeat 1 203 0 276 30 0 0 chr2 73864474 73864507 -176823347 + (CATTC)n Simple_repeat Simple_repeat 2 34 0 5047 184 52 25 chr2 73864507 73865211 -176822643 - L1MB7 LINE L1 -1294 4890 4089 866 251 84 0 chr2 73865863 73866078 -176821776 - MIR SINE MIR -28 234 2 938 288 120 29 chr2 73866587 73867182 -176820672 - L1MEc LINE L1 -3935 2461 1771 2093 115 14 0 chr2 73867182 73867477 -176820377 - AluSx SINE Alu -13 299 1 938 288 120 29 chr2 73867477 73867687 -176820167 - L1MEc LINE L1 -4625 1771 1582 260 303 0 0 chr2 73867665 73867741 -176820113 + L1M4 LINE L1 3717 3792 -2354 * 703 274 55 72 chr2 73867748 73867782 -176820072 - L2 LINE L2 0 3313 3280 363 96 0 0 chr2 73867782 73867834 -176820020 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 703 274 55 72 chr2 73867834 73868146 -176819708 - L2 LINE L2 -33 3280 2973 21 57 0 0 chr2 73868195 73868230 -176819624 + AT_rich Low_complexity Low_complexity 1 35 0 230 314 14 0 chr2 73868296 73868366 -176819488 - MLT1K LTR MaLR 0 588 518 1991 125 0 0 chr2 73868366 73868675 -176819179 - AluSx SINE Alu 0 309 1 342 0 0 0 chr2 73869400 73869438 -176818416 + (TG)n Simple_repeat Simple_repeat 1 38 0 507 320 22 31 chr2 73869518 73869746 -176818108 + LTR16C LTR ERVL 260 485 -6 2161 12 8 0 chr2 73870705 73870949 -176816905 - L1PA2 LINE L1 0 6155 5910 2298 8 0 0 chr2 73870949 73871201 -176816653 + L1PA3 LINE L1 5609 5860 -295 263 333 80 29 chr2 73871220 73871358 -176816496 - L2 LINE L2 -219 3053 2909 233 338 76 29 chr2 73871461 73871671 -176816183 + Charlie8 DNA MER1_type 89 308 -2109 903 222 109 30 chr2 73871795 73872133 -176815721 - LTR33 LTR ERVL -138 383 19 180 254 109 0 chr2 73872839 73872894 -176814960 - L3 LINE CR1 -551 1026 966 194 326 34 0 chr2 73872976 73873065 -176814789 - MIR SINE MIR -86 122 31 1695 139 0 0 chr2 73873557 73873809 -176814045 + AluSx SINE Alu 42 293 -19 318 222 37 25 chr2 73874108 73874189 -176813665 - MER5B DNA MER1_type -25 153 72 1880 125 13 3 chr2 73875138 73875441 -176812413 + AluSc SINE Alu 1 306 -3 723 176 23 0 chr2 73875798 73875929 -176811925 + AluJo SINE Alu 1 134 -178 706 210 121 0 chr2 73875936 73876093 -176811761 - MER5A DNA MER1_type -11 178 3 189 0 0 0 chr2 73880270 73880291 -176807563 + (TGAG)n Simple_repeat Simple_repeat 3 23 0 283 245 163 20 chr2 73881632 73881730 -176806124 - MIR3 SINE MIR -7 201 90 228 252 129 41 chr2 73881737 73881846 -176806008 - MIR SINE MIR -6 256 122 2119 95 0 3 chr2 73881846 73882158 -176805696 + AluSx SINE Alu 1 311 0 228 252 129 41 chr2 73882158 73882208 -176805646 - MIR SINE MIR -140 122 78 208 273 93 36 chr2 73883520 73883659 -176804195 - MIR3 SINE MIR -8 200 54 584 88 0 0 chr2 73884727 73884807 -176803047 - MADE1 DNA Mariner 0 80 1 263 227 30 0 chr2 73886368 73886434 -176801420 - MER5B DNA MER1_type -102 76 9 2250 87 3 0 chr2 73886726 73887025 -176800829 - AluSq SINE Alu -13 300 1 207 282 39 51 chr2 73887687 73887765 -176800089 + L2 LINE L2 3236 3312 -1 180 0 0 0 chr2 73888179 73888199 -176799655 + (TTAGGG)n Simple_repeat Simple_repeat 3 22 0 396 283 20 40 chr2 73888480 73888632 -176799222 - MIR SINE MIR -37 225 77 195 263 70 97 chr2 73889171 73889285 -176798569 + MER5A DNA MER1_type 77 187 -2 837 209 13 6 chr2 73889308 73889466 -176798388 + MER5B DNA MER1_type 1 159 -19 628 214 35 7 chr2 73890024 73890169 -176797685 + MER3 DNA MER1_type 1 149 -60 356 310 102 15 chr2 73890216 73890404 -176797450 - MIR SINE MIR -50 212 3 498 293 53 53 chr2 73891685 73891948 -176795906 - Charlie8 DNA MER1_type -2140 277 15 754 335 20 0 chr2 73892237 73892482 -176795372 + MIR SINE MIR 13 262 0 300 303 39 15 chr2 73893367 73893558 -176794296 + MIR SINE MIR 8 262 0 365 133 0 0 chr2 73893567 73893627 -176794227 + MER116 DNA Mariner 14 73 -7 1002 210 30 5 chr2 73893629 73893829 -176794025 + MER20 DNA MER1_type 4 208 -11 289 294 81 19 chr2 73894119 73894279 -176793575 - MER5A DNA MER1_type -6 172 3 238 261 47 74 chr2 73894500 73894629 -176793225 - MER5A DNA MER1_type -6 172 47 307 277 11 43 chr2 73895299 73895393 -176792461 + L1ME4a LINE L1 5790 5880 -241 2129 81 10 10 chr2 73895417 73895727 -176792127 + AluYb8 SINE Alu 9 318 0 241 161 89 0 chr2 73895773 73895829 -176792025 + L1ME4a LINE L1 5976 6036 -85 3705 80 24 28 chr2 73895850 73896388 -176791466 + L1PA10 LINE L1 5628 6163 -5 329 241 13 25 chr2 73897066 73897145 -176790709 + MIR SINE MIR 6 83 -179 3047 132 23 0 chr2 73897739 73898177 -176789677 + MER1A DNA MER1_type 82 529 0 453 231 112 14 chr2 73898298 73898441 -176789413 + MER5A DNA MER1_type 5 161 -28 225 0 0 0 chr2 73898496 73898521 -176789333 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 1760 167 0 7 chr2 73898525 73898819 -176789035 - AluJb SINE Alu -20 292 1 250 135 0 0 chr2 73898819 73898856 -176788998 + MER5A DNA MER1_type 146 182 -7 193 245 0 21 chr2 73899219 73899313 -176788541 + GA-rich Low_complexity Low_complexity 1 92 0 242 317 0 39 chr2 73899337 73899441 -176788413 + GA-rich Low_complexity Low_complexity 4 103 0 307 308 17 0 chr2 73901132 73901249 -176786605 + CT-rich Low_complexity Low_complexity 2 120 0 362 310 48 7 chr2 73903348 73903493 -176784361 - MIR SINE MIR -64 198 48 324 0 0 0 chr2 73904152 73904188 -176783666 + (TG)n Simple_repeat Simple_repeat 2 37 0 495 321 52 29 chr2 73904451 73904686 -176783168 - MIR SINE MIR -17 245 2 243 0 0 0 chr2 73905263 73905290 -176782564 + (A)n Simple_repeat Simple_repeat 1 27 0 198 167 48 0 chr2 73905918 73905960 -176781894 - MIR SINE MIR -60 148 105 23 0 0 0 chr2 73906165 73906188 -176781666 + AT_rich Low_complexity Low_complexity 1 23 0 1295 232 125 22 chr2 73906672 73907073 -176780781 + MLT1J2 LTR MaLR 1 442 -8 633 316 148 51 chr2 73908145 73909066 -176778788 - HAL1b LINE L1 -480 1341 84 196 375 58 0 chr2 73910362 73910482 -176777372 - L3 LINE CR1 -35 1542 1416 543 286 85 5 chr2 73910528 73910727 -176777127 - L3 LINE CR1 -164 1413 1199 2343 163 125 38 chr2 73910728 73911225 -176776629 + MLT1F LTR MaLR 3 542 0 708 282 9 5 chr2 73911397 73911610 -176776244 - MIR SINE MIR -44 218 5 784 332 46 48 chr2 73911614 73912111 -176775743 - L3 LINE CR1 -530 1047 552 309 234 76 95 chr2 73912251 73912409 -176775445 - L3 LINE CR1 -1075 502 348 374 214 89 27 chr2 73913968 73914080 -176773774 + LTR67 LTR ERVL 436 554 -3 2089 81 4 0 chr2 73914430 73914688 -176773166 - AluSg SINE Alu -21 289 31 1593 179 58 3 chr2 73915650 73915941 -176771913 - AluJo SINE Alu -2 310 4 2370 73 3 3 chr2 73915955 73916244 -176771610 - AluY SINE Alu -22 289 1 316 246 49 8 chr2 73916272 73916394 -176771460 - L1ME4a LINE L1 -11 6110 5984 672 276 103 38 chr2 73916450 73916488 -176771366 - L1ME4a LINE L1 -257 5864 5830 2228 127 19 22 chr2 73916488 73916850 -176771004 - MER46B DNA MER2_type 0 236 1 672 276 103 38 chr2 73916850 73917363 -176770491 - L1ME4a LINE L1 -291 5830 5271 282 318 93 61 chr2 73917568 73918009 -176769845 - L1ME4a LINE L1 -1194 4952 4498 365 227 45 38 chr2 73918198 73918330 -176769524 + MIR3 SINE MIR 11 143 -65 458 255 125 0 chr2 73918935 73919091 -176768763 + MER5A DNA MER1_type 4 182 -7 632 226 48 30 chr2 73919113 73919281 -176768573 - MER5B DNA MER1_type -7 171 1 309 164 66 0 chr2 73921660 73921721 -176766133 - MIR SINE MIR -109 153 89 2220 190 91 13 chr2 73923091 73923554 -176764300 - MLT1D LTR MaLR 0 505 7 679 278 114 51 chr2 73923632 73924060 -176763794 - L1M2 LINE L1 -456 5665 5254 635 150 45 45 chr2 73924906 73925039 -176762815 - L1MB1 LINE L1 -50 6118 5986 22 35 0 0 chr2 73925390 73925419 -176762435 + AT_rich Low_complexity Low_complexity 1 29 0 370 234 18 36 chr2 73925706 73925817 -176762037 + MIR SINE MIR 24 132 -130 987 302 74 16 chr2 73925909 73926429 -176761425 - L2 LINE L2 0 3313 2763 822 199 12 12 chr2 73928073 73928244 -176759610 + MER5B DNA MER1_type 3 173 -5 254 264 69 11 chr2 73928256 73928343 -176759511 - MER5B DNA MER1_type 0 178 87 375 239 80 0 chr2 73928388 73928476 -176759378 + MLT1I LTR MaLR 41 135 -274 384 172 182 0 chr2 73928579 73928678 -176759176 + MLT1I LTR MaLR 289 405 -4 909 253 86 3 chr2 73929081 73929375 -176758479 - MER33 DNA MER1_type -15 309 1 1599 153 13 71 chr2 73929941 73930319 -176757535 - L1 LINE L1 -856 5290 4935 451 144 127 51 chr2 73930295 73930413 -176757441 + L1MA8 LINE L1 6165 6291 0 * 1984 127 68 0 chr2 73931511 73931803 -176756051 - AluSx SINE Alu 0 312 1 720 231 41 86 chr2 73931992 73932167 -176755687 - MIR SINE MIR 0 262 102 5236 23 2 7 chr2 73932167 73932774 -176755080 + L1PA4 LINE L1 5552 6155 0 720 231 41 86 chr2 73932774 73932867 -176754987 - MIR SINE MIR -160 102 6 225 148 0 19 chr2 73933298 73933315 -176754539 - LTR66 LTR ERVL -163 447 431 1868 158 13 0 chr2 73933315 73933618 -176754236 + AluJb SINE Alu 1 307 -5 225 148 0 19 chr2 73933618 73933654 -176754200 - LTR66 LTR ERVL -179 431 395 360 64 0 0 chr2 73933655 73933702 -176754152 + (CA)n Simple_repeat Simple_repeat 2 48 0 287 296 23 0 chr2 73933742 73933830 -176754024 + (CATATA)n Simple_repeat Simple_repeat 5 94 0 1063 189 66 20 chr2 73934030 73934274 -176753580 + MIR SINE MIR 8 262 0 218 286 14 14 chr2 73935628 73935698 -176752156 + MER5A DNA MER1_type 119 188 -1 993 198 55 5 chr2 73935808 73936025 -176751829 - MIR SINE MIR -6 256 29 347 260 103 7 chr2 73936594 73936740 -176751114 - L1ME4a LINE L1 -218 5903 5744 228 222 69 14 chr2 73936775 73936847 -176751007 - L1ME4a LINE L1 -454 5667 5592 2228 123 0 0 chr2 73937346 73937648 -176750206 + AluSq SINE Alu 1 302 -11 510 248 62 0 chr2 73937822 73937951 -176749903 + MER112 DNA MER1_type 83 219 -41 186 342 77 8 chr2 73937951 73938068 -176749786 - MIR3 SINE MIR -26 182 58 296 328 23 23 chr2 73939476 73939650 -176748204 - MER117 DNA MER1_type -9 188 15 910 158 0 0 chr2 73940042 73940175 -176747679 + FLAM_C SINE Alu 1 133 0 504 248 88 46 chr2 73940774 73941036 -176746818 + L1MC5 LINE L1 7645 7917 -44 360 0 0 0 chr2 73941074 73941114 -176746740 + (CA)n Simple_repeat Simple_repeat 2 41 0 28 33 0 49 chr2 73943578 73943639 -176744215 + AT_rich Low_complexity Low_complexity 1 58 0 2787 239 138 58 chr2 73944219 73944409 -176743445 - MER45C DNA AcHobo -628 953 780 608 122 9 9 chr2 73944409 73944516 -176743338 - L1MB4 LINE L1 0 6180 6074 2787 239 138 58 chr2 73944516 73945207 -176742647 - MER45C DNA AcHobo -801 780 1 382 233 16 119 chr2 73946638 73946831 -176741023 - MIR SINE MIR -12 250 78 207 250 103 0 chr2 73947386 73947454 -176740400 - L3 LINE CR1 -70 1507 1433 410 309 79 0 chr2 73949076 73949228 -176738626 + MIR SINE MIR 28 191 -71 1335 142 5 0 chr2 73949506 73949710 -176738144 + AluSg/x SINE Alu 91 295 -17 326 345 72 5 chr2 73950576 73950770 -176737084 + MIR SINE MIR 56 262 0 2241 104 20 0 chr2 73950793 73951091 -176736763 - AluSg SINE Alu -1 309 6 225 319 44 11 chr2 73951502 73951593 -176736261 - L3b LINE CR1 -200 1383 1290 1999 136 3 3 chr2 73951609 73951896 -176735958 - AluSx SINE Alu -3 309 23 731 65 0 0 chr2 73951897 73951990 -176735864 - L1PA11 LINE L1 -12 6162 6070 325 212 81 50 chr2 73952003 73952102 -176735752 - L2 LINE L2 0 3313 3212 405 247 32 76 chr2 73954945 73955103 -176732751 + MER20B DNA MER1_type 1 151 -632 4125 150 39 46 chr2 73956193 73956980 -176730874 + L1MC2 LINE L1 5551 6332 -12 271 160 0 170 chr2 73957381 73957481 -176730373 + L1MC2 LINE L1 6147 6229 -115 460 262 64 35 chr2 73958210 73958412 -176729442 + L2 LINE L2 3102 3309 -4 420 323 150 14 chr2 73958648 73959159 -176728695 - L2 LINE L2 -247 3066 2487 1381 104 85 0 chr2 73959585 73959796 -176728058 + MER30 DNA MER1_type 1 229 -1 560 256 111 0 chr2 73960728 73960900 -176726954 - MER117 DNA MER1_type 0 197 7 1939 128 26 23 chr2 73962040 73962344 -176725510 - AluJb SINE Alu -6 306 2 563 240 41 74 chr2 73964102 73964332 -176723522 + MIR SINE MIR 5 228 -34 625 226 19 0 chr2 73965399 73965554 -176722300 + L1ME4a LINE L1 2448 2605 -3541 2093 206 9 4 chr2 73965565 73966026 -176721828 + L1ME4a LINE L1 2669 3131 -3015 15543 128 36 22 chr2 73966091 73968474 -176719380 + Tigger1 DNA MER2_type 1 2417 -1 2171 128 0 0 chr2 73968639 73968936 -176718918 - AluSx SINE Alu -13 299 3 242 295 73 61 chr2 73969523 73969784 -176718070 + L1ME4a LINE L1 4796 5059 -1087 374 280 87 14 chr2 73969969 73970176 -176717678 + L1ME4a LINE L1 5271 5492 -629 389 317 73 24 chr2 73970197 73970620 -176717234 + L1ME4a LINE L1 5539 5982 -139 2206 82 0 11 chr2 73972037 73972318 -176715536 + AluSq SINE Alu 34 311 -2 2214 115 10 3 chr2 73972429 73972733 -176715121 + AluSx SINE Alu 1 306 -6 251 242 81 10 chr2 73972796 73972895 -176714959 + L1ME4a LINE L1 3359 3464 -2682 431 302 124 67 chr2 73972898 73973699 -176714155 + L1ME4a LINE L1 3511 4359 -1787 425 295 54 16 chr2 73973716 73973845 -176714009 + L2 LINE L2 3180 3313 0 2765 108 31 7 chr2 73973938 73974355 -176713499 + L1MA3 LINE L1 5879 6305 0 264 209 0 0 chr2 73974369 73974455 -176713399 + GA-rich Low_complexity Low_complexity 1 86 0 247 291 52 52 chr2 73974455 73974589 -176713265 - MIR SINE MIR -128 134 1 380 316 69 53 chr2 73974677 73975054 -176712800 + L1ME4a LINE L1 4880 5262 -884 953 140 23 29 chr2 73975485 73975656 -176712198 - L1PA16 LINE L1 0 6166 5997 1003 127 89 0 chr2 73975679 73975836 -176712018 - AluJb SINE Alu -20 292 122 344 70 18 53 chr2 73975865 73975922 -176711932 - L1P3 LINE L1 -6404 57 3 814 136 0 0 chr2 73975927 73976037 -176711817 - FLAM_C SINE Alu -32 111 2 377 298 53 26 chr2 73976060 73976352 -176711502 - L1ME4a LINE L1 -396 5725 5526 315 261 87 68 chr2 73976353 73976496 -176711358 + L1ME4a LINE L1 5709 5859 -262 1521 113 198 8 chr2 73976496 73976753 -176711101 + AluSg1 SINE Alu 1 306 -3 315 261 87 68 chr2 73976753 73976816 -176711038 + L1ME4a LINE L1 5859 5919 -202 416 109 19 45 chr2 73976919 73977075 -176710779 + (TA)n Simple_repeat Simple_repeat 1 152 0 21 57 0 0 chr2 73977230 73977265 -176710589 + AT_rich Low_complexity Low_complexity 1 35 0 395 205 112 75 chr2 73978565 73978726 -176709128 + MER5A DNA MER1_type 1 167 -22 366 245 10 31 chr2 73979478 73979576 -176708278 - MIR SINE MIR -54 208 113 233 146 55 0 chr2 73979638 73979693 -176708161 + (TTAAA)n Simple_repeat Simple_repeat 3 60 0 2359 38 10 14 chr2 73979722 73980010 -176707844 + AluY SINE Alu 1 287 -24 191 61 30 0 chr2 73980013 73980046 -176707808 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 505 213 228 0 chr2 73980275 73980411 -176707443 - MIR SINE MIR -17 245 79 528 267 34 40 chr2 73981344 73981520 -176706334 + MIR SINE MIR 88 262 0 2211 123 0 10 chr2 73984794 73985103 -176702751 + AluSx SINE Alu 1 306 -6 2881 3 0 6 chr2 73985108 73985421 -176702433 + AluYa5 SINE Alu 1 311 0 601 308 77 5 chr2 73985707 73985902 -176701952 - MIR SINE MIR -52 210 2 268 280 76 51 chr2 73985902 73986004 -176701850 + MIR SINE MIR 124 228 -34 1967 127 3 10 chr2 73988630 73988962 -176698892 + AluSx SINE Alu 1 312 0 226 324 14 0 chr2 73989243 73989317 -176698537 - L2 LINE L2 -5 3267 3193 269 288 0 0 chr2 73989676 73989742 -176698112 + MLT1L LTR MaLR 10 75 -540 483 311 78 9 chr2 73989776 73989995 -176697859 + MLT1L LTR MaLR 160 393 -222 555 16 0 0 chr2 73990276 73990340 -176697514 + (TTCC)n Simple_repeat Simple_repeat 1 64 0 1789 149 22 0 chr2 73990341 73990610 -176697244 - AluSx SINE Alu -37 275 1 28 0 0 0 chr2 73990664 73990692 -176697162 + AT_rich Low_complexity Low_complexity 1 28 0 269 321 71 51 chr2 73991219 73991415 -176696439 + MLT1H1 LTR MaLR 108 307 -242 387 238 12 0 chr2 73991483 73991567 -176696287 + MLT1H1 LTR MaLR 463 547 -8 302 302 142 45 chr2 73991704 73991798 -176696056 + L1ME3 LINE L1 2678 2762 -3384 2145 85 68 0 chr2 73991798 73992079 -176695775 + AluSx SINE Alu 2 301 -11 302 302 142 45 chr2 73992079 73993115 -176694739 + L1ME3 LINE L1 2762 3917 -2229 249 211 0 0 chr2 73993566 73993618 -176694236 - L1ME LINE L1 -541 5580 5529 241 258 126 31 chr2 73993961 73994120 -176693734 + L1ME4a LINE L1 5902 6075 -46 643 298 49 25 chr2 73995027 73995272 -176692582 + MIR SINE MIR 6 256 -6 2400 155 74 92 chr2 73995743 73996273 -176691581 + MLT2B1 LTR ERVL 1 520 0 3913 142 38 2 chr2 73996426 73997009 -176690845 - MER6A DNA MER2_type -1 604 1 2303 99 16 0 chr2 73997281 73997585 -176690269 + AluSc SINE Alu 1 309 0 212 244 0 0 chr2 73997675 73997720 -176690134 + CT-rich Low_complexity Low_complexity 2 46 0 360 0 0 0 chr2 73997991 73998031 -176689823 + (TG)n Simple_repeat Simple_repeat 2 41 0 663 251 12 18 chr2 73998401 73998572 -176689282 - MIR SINE MIR -65 197 28 239 324 81 0 chr2 73999865 73999976 -176687878 + L2 LINE L2 2985 3104 -168 182 339 0 0 chr2 74000665 74000724 -176687130 + L2 LINE L2 3255 3313 0 24 0 0 0 chr2 74000886 74000910 -176686944 + AT_rich Low_complexity Low_complexity 1 24 0 972 231 129 3 chr2 74002264 74002597 -176685257 + L1ME3 LINE L1 4228 4602 -1544 655 229 136 61 chr2 74002597 74003098 -176684756 + MLT1F LTR MaLR 46 595 0 3480 228 40 24 chr2 74003100 74003949 -176683905 + L1ME3 LINE L1 5068 5937 -225 1873 124 40 90 chr2 74003949 74004303 -176683551 + MER44D DNA MER2_type 2 607 -2 3480 228 40 24 chr2 74004303 74004532 -176683322 + L1ME3 LINE L1 5937 6161 -1 755 247 157 18 chr2 74005032 74005364 -176682490 + MLT1J1 LTR MaLR 45 422 -24 557 255 105 2 chr2 74005365 74005574 -176682280 + L1ME3A LINE L1 5508 5755 -487 878 162 0 0 chr2 74005590 74005726 -176682128 + FLAM_C SINE Alu 1 136 -7 461 256 17 11 chr2 74005735 74005915 -176681939 + L1ME3A LINE L1 5771 5951 -219 587 306 75 36 chr2 74006246 74006860 -176680994 + L1M4 LINE L1 3601 4238 -1908 2384 222 60 8 chr2 74006869 74007405 -176680449 + MER97b DNA MER1_type? 15 578 -475 248 235 0 0 chr2 74007488 74007539 -176680315 - MER66B LTR ERV1 -141 345 295 2071 137 3 3 chr2 74007548 74007848 -176680006 - AluSx SINE Alu -12 300 1 827 278 156 9 chr2 74008028 74008355 -176679499 - L2 LINE L2 -667 2647 2273 237 182 68 23 chr2 74009131 74009219 -176678635 - L1P5 LINE L1 -694 5427 5339 234 295 0 0 chr2 74010540 74010601 -176677253 + (TA)n Simple_repeat Simple_repeat 2 62 0 1708 159 179 0 chr2 74012775 74013083 -176674771 - MLT1A1 LTR MaLR 0 365 3 1832 138 29 42 chr2 74013174 74013485 -176674369 + AluJb SINE Alu 6 312 0 420 174 174 18 chr2 74013547 74013656 -176674198 + L1MB8 LINE L1 6053 6178 0 228 57 0 0 chr2 74013837 74013872 -176673982 + L1PA3 LINE L1 6119 6153 -2 202 316 0 0 chr2 74014074 74014131 -176673723 + MIR SINE MIR 95 151 -57 518 210 164 32 chr2 74014447 74014728 -176673126 - L1ME4a LINE L1 -11 6110 5793 63 87 0 0 chr2 74014759 74014920 -176672934 + AT_rich Low_complexity Low_complexity 1 161 0 1042 276 18 45 chr2 74014928 74015039 -176672815 - L1ME4a LINE L1 -343 5778 5665 2359 86 13 0 chr2 74015039 74015343 -176672511 - AluSp SINE Alu -5 308 1 1042 276 18 45 chr2 74015343 74015742 -176672112 - L1ME4a LINE L1 -456 5665 5282 372 198 47 0 chr2 74015862 74015948 -176671906 - L1MB4 LINE L1 0 6180 6091 443 343 98 23 chr2 74015983 74016423 -176671431 - L1ME4a LINE L1 -926 5220 4748 384 73 0 0 chr2 74017505 74017560 -176670294 - L1MA3 LINE L1 0 6305 6251 219 78 78 49 chr2 74017715 74017857 -176669997 + (TATAA)n Simple_repeat Simple_repeat 2 147 0 2469 77 3 7 chr2 74017951 74018261 -176669593 + AluSp SINE Alu 1 309 -4 554 363 56 32 chr2 74018962 74019653 -176668201 - HERV16 LTR ERVL -4288 708 1 408 303 56 71 chr2 74019653 74019977 -176667877 - LTR16C LTR ERVL 0 491 173 1827 120 0 4 chr2 74020266 74020525 -176667329 + AluSx SINE Alu 47 304 -8 2008 144 13 0 chr2 74020700 74020998 -176666856 - AluSx SINE Alu -10 302 1 604 314 135 37 chr2 74021011 74021924 -176665930 - L1ME4a LINE L1 -2918 3228 2227 254 275 0 50 chr2 74021927 74022047 -176665807 - MLT2E LTR ERVL 0 628 515 213 250 16 0 chr2 74022527 74022591 -176665263 + T-rich Low_complexity Low_complexity 2 66 0 301 286 21 36 chr2 74022760 74022900 -176664954 - LTR67 LTR ERVL -2 555 418 2254 75 4 0 chr2 74023048 74023326 -176664528 - AluSg SINE Alu -6 304 26 223 386 70 0 chr2 74023491 74023605 -176664249 - L2 LINE L2 -10 3262 3141 5761 50 13 0 chr2 74024407 74025083 -176662771 + L1PA8 LINE L1 5484 6168 -4 1231 115 4 64 chr2 74025083 74025317 -176662537 + L1MA9 LINE L1 6052 6271 -41 186 224 0 0 chr2 74026982 74027031 -176660823 + CT-rich Low_complexity Low_complexity 4 52 0 5651 216 66 51 chr2 74027164 74029627 -176658227 - L1MD1 LINE L1 0 6636 4211 228 67 0 0 chr2 74029627 74029657 -176658197 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 5651 216 66 51 chr2 74029657 74029682 -176658172 - L1MD1 LINE L1 -2425 4211 4188 643 52 0 0 chr2 74029682 74029759 -176658095 - L1PA5 LINE L1 -5 6149 6073 7069 36 1 0 chr2 74029759 74030541 -176657313 + L1PA5 LINE L1 5361 6146 -8 5651 216 66 51 chr2 74030541 74030855 -176656999 - L1MD1 LINE L1 -2447 4189 3796 635 159 9 3 chr2 74030884 74031116 -176656738 - AluJb SINE Alu -7 305 1 4021 194 58 18 chr2 74031116 74033425 -176654429 - L1MD1 LINE L1 -2794 3746 1533 207 0 0 0 chr2 74033425 74033448 -176654406 + (TA)n Simple_repeat Simple_repeat 1 23 0 2209 103 7 0 chr2 74033448 74033739 -176654115 - AluSc SINE Alu -16 293 1 4021 194 58 18 chr2 74033739 74034056 -176653798 - L1MD1 LINE L1 -5006 1534 967 1013 155 6 12 chr2 74034055 74034209 -176653645 - L1MD1 LINE L1 -6362 178 24 * 1695 185 0 14 chr2 74034209 74034506 -176653348 - AluJb SINE Alu -19 293 1 2085 149 43 0 chr2 74034739 74035068 -176652786 + MER7A DNA MER2_type 6 346 0 516 325 75 38 chr2 74035068 74035495 -176652359 - L2 LINE L2 -779 2535 2093 366 292 44 15 chr2 74037086 74037223 -176650631 - MIR SINE MIR -75 187 47 183 250 0 23 chr2 74037444 74037488 -176650366 + L2 LINE L2 2928 2970 -344 454 234 0 9 chr2 74038802 74038913 -176648941 - L1M4 LINE L1 -1926 4220 4111 2296 85 3 3 chr2 74039045 74039340 -176648514 + AluSx SINE Alu 1 295 -17 618 249 57 20 chr2 74041177 74041422 -176646432 - L1ME4a LINE L1 -234 5887 5634 249 268 32 16 chr2 74043346 74043469 -176644385 + L1M4 LINE L1 4382 4506 -1640 464 306 101 92 chr2 74043697 74044152 -176643702 - L1MEd LINE L1 -5571 548 90 1831 207 28 6 chr2 74044574 74044931 -176642923 - MLT1A1 LTR MaLR 0 365 1 2113 93 40 0 chr2 74047043 74047321 -176640533 + AluSx SINE Alu 1 289 -23 414 283 41 0 chr2 74047836 74047981 -176639873 - L2 LINE L2 -305 3008 2858 295 284 58 39 chr2 74048214 74048369 -176639485 - L2 LINE L2 -1202 2112 1955 379 283 75 8 chr2 74048369 74048489 -176639365 + MER94 DNA DNA 2 129 -5 1445 256 141 23 chr2 74048489 74049053 -176638801 - L2 LINE L2 -1363 1951 1310 2630 179 38 77 chr2 74049053 74049690 -176638164 + LTR9 LTR ERV1 1 612 0 1445 256 141 23 chr2 74049690 74049727 -176638127 - L2 LINE L2 -2004 1310 1279 2217 66 293 6 chr2 74049733 74050081 -176637773 + LTR7 LTR ERV1 1 448 -2 23909 92 50 42 chr2 74050083 74053799 -176634055 + HERVH LTR ERV1 1 3746 -3967 1123 56 0 0 chr2 74053794 74053938 -176633916 + HERVH LTR ERV1 3850 3993 -3720 * 4389 144 3 1 chr2 74053940 74054601 -176633253 + HERVH LTR ERV1 4488 5149 -2564 1435 125 19 0 chr2 74054602 74054818 -176633036 + HERVH LTR ERV1 5600 5819 -1894 * 2355 106 56 13 chr2 74054816 74055192 -176632662 + HERVH LTR ERV1 7322 7713 0 2907 70 117 0 chr2 74055192 74055593 -176632261 + LTR7 LTR ERV1 1 448 -2 1043 237 128 30 chr2 74055673 74056078 -176631776 + L1MCc LINE L1 25 469 -5954 3051 232 54 73 chr2 74056114 74056733 -176631121 + L1MCc LINE L1 1982 2612 -4329 952 197 70 28 chr2 74056733 74056946 -176630908 - MER58A DNA MER1_type -2 222 1 3051 232 54 73 chr2 74056946 74057427 -176630427 + L1MCc LINE L1 2612 3101 -3840 4514 111 6 12 chr2 74057427 74058065 -176629789 - L1PA13 LINE L1 -5 6158 5525 3051 232 54 73 chr2 74058065 74058310 -176629544 + L1MCc LINE L1 3101 3248 -3693 2237 120 0 0 chr2 74058310 74058609 -176629245 + AluSx SINE Alu 1 299 -13 3051 232 54 73 chr2 74058609 74058929 -176628925 + L1MCc LINE L1 3248 3573 -3368 2179 285 112 9 chr2 74058938 74059699 -176628155 - L2 LINE L2 -2107 1207 369 1045 227 171 77 chr2 74060530 74061267 -176626587 + HAL1 LINE L1 848 1653 -854 571 278 95 9 chr2 74061276 74061599 -176626255 + LTR16B LTR ERVL 1 378 -86 22 0 0 0 chr2 74062807 74062829 -176625025 + AT_rich Low_complexity Low_complexity 1 22 0 540 279 116 11 chr2 74063059 74063249 -176624605 + MIR SINE MIR 29 238 -24 822 246 66 0 chr2 74063377 74063560 -176624294 + MIR SINE MIR 21 215 -47 1480 148 94 0 chr2 74063622 74063878 -176623976 + MER7A DNA MER2_type 66 343 -3 5844 138 32 21 chr2 74063946 74065114 -176622740 + L1MA7 LINE L1 5114 6291 0 4635 251 92 49 chr2 74065188 74066802 -176621052 + HAL1 LINE L1 74 1771 -736 1931 86 0 66 chr2 74066802 74067165 -176620689 + AluY SINE Alu 1 343 0 4635 251 92 49 chr2 74067165 74067279 -176620575 + HAL1 LINE L1 1771 1879 -628 1930 250 45 61 chr2 74067358 74067449 -176620405 + HAL1 LINE L1 1694 1785 -722 243 0 0 0 chr2 74067449 74067476 -176620378 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1930 250 45 61 chr2 74067476 74068187 -176619667 + HAL1 LINE L1 1785 2483 -24 180 0 0 0 chr2 74068700 74068720 -176619134 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 804 190 6 19 chr2 74068726 74068884 -176618970 - FAM SINE Alu -24 161 6 294 295 143 0 chr2 74069062 74069174 -176618680 - MIR3 SINE MIR -19 189 62 1128 199 115 92 chr2 74069177 74069559 -176618295 - MLT1C LTR MaLR -2 465 75 1674 100 0 4 chr2 74069777 74070018 -176617836 + AluY SINE Alu 66 305 -6 262 287 96 35 chr2 74071301 74071416 -176616438 + MIR SINE MIR 20 141 -67 369 0 0 0 chr2 74071421 74071462 -176616392 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1593 146 25 48 chr2 74072636 74072951 -176614903 - AluJb SINE Alu -4 308 1 210 71 0 0 chr2 74072955 74072983 -176614871 + (A)n Simple_repeat Simple_repeat 1 28 0 310 137 0 3 chr2 74072983 74073034 -176614820 - FAM SINE Alu -7 168 125 1712 147 39 0 chr2 74073516 74073802 -176614052 - AluJb SINE Alu -15 297 1 466 241 185 37 chr2 74073802 74073878 -176613976 - MIR SINE MIR -49 213 150 1905 144 0 0 chr2 74073878 74074177 -176613677 - AluSx SINE Alu 0 312 14 466 241 185 37 chr2 74074177 74074262 -176613592 - MIR SINE MIR -112 150 28 687 206 50 61 chr2 74074424 74074618 -176613236 + MIR3 SINE MIR 13 201 -7 181 304 80 56 chr2 74074620 74074745 -176613109 - L2 LINE L2 -4 3309 3182 914 286 118 9 chr2 74075776 74076365 -176611489 + MER115 DNA AcHobo 4 688 -5 273 240 0 0 chr2 74076535 74076631 -176611223 + (TG)n Simple_repeat Simple_repeat 1 96 0 520 259 35 14 chr2 74076781 74076924 -176610930 - MIR SINE MIR -109 153 8 231 233 95 60 chr2 74077343 74077459 -176610395 - L1M4 LINE L1 -3425 2721 2602 385 308 86 73 chr2 74077522 74077628 -176610226 - L1M4 LINE L1 -3546 2600 2497 1665 201 85 0 chr2 74077628 74077991 -176609863 + MSTD LTR MaLR 1 394 -2 385 308 86 73 chr2 74077991 74078336 -176609518 - L1M4 LINE L1 -3649 2497 2143 1920 113 56 0 chr2 74078359 74078643 -176609211 - AluSq SINE Alu -13 300 1 3398 206 56 32 chr2 74078746 74079668 -176608186 - L1ME1 LINE L1 -5 6230 5280 240 229 0 0 chr2 74079668 74079716 -176608138 + MER20 DNA MER1_type 172 219 0 5230 234 63 87 chr2 74079716 74079972 -176607882 - L1ME1 LINE L1 -4299 2097 1836 1923 149 3 3 chr2 74079972 74080280 -176607574 + AluJb SINE Alu 5 312 0 5230 234 63 87 chr2 74080280 74082125 -176605729 - L1ME1 LINE L1 -4560 1836 46 1469 212 31 34 chr2 74082226 74082580 -176605274 + MLT1A1 LTR MaLR 2 354 -11 350 313 53 31 chr2 74082694 74082921 -176604933 - HAL1b LINE L1 -525 823 592 2348 173 91 26 chr2 74083744 74083834 -176604020 + MER44D DNA MER2_type 22 105 -2382 2021 120 0 13 chr2 74083834 74084134 -176603720 - AluSx SINE Alu -11 301 6 2348 173 91 26 chr2 74084134 74084540 -176603314 + MER44D DNA MER2_type 105 605 0 1738 59 5 0 chr2 74084665 74084884 -176602970 - AluSp SINE Alu -13 300 81 334 300 130 35 chr2 74085237 74085467 -176602387 + MIR SINE MIR 2 253 -9 227 79 26 0 chr2 74086186 74086224 -176601630 + (TA)n Simple_repeat Simple_repeat 2 40 0 2222 84 7 10 chr2 74088051 74088360 -176599494 + AluSq SINE Alu 6 313 0 281 330 145 35 chr2 74089614 74090194 -176597660 + L2 LINE L2 2623 3270 -2 198 308 15 31 chr2 74090462 74090527 -176597327 + L2 LINE L2 3250 3313 0 836 256 39 8 chr2 74090998 74091232 -176596622 + MIR SINE MIR 10 250 -12 760 182 85 12 chr2 74092324 74092489 -176595365 + MIR3 SINE MIR 3 179 -29 247 229 17 0 chr2 74093870 74093988 -176593866 + (TG)n Simple_repeat Simple_repeat 2 121 0 442 257 16 38 chr2 74094023 74094206 -176593648 + (TG)n Simple_repeat Simple_repeat 1 179 0 2142 111 7 3 chr2 74094991 74095297 -176592557 - AluSg SINE Alu -3 307 1 199 239 0 0 chr2 74095379 74095425 -176592429 + L2 LINE L2 3227 3272 0 2348 126 138 59 chr2 74096701 74096824 -176591030 + MLT2B2 LTR ERVL 1 113 -402 2007 108 11 0 chr2 74096824 74097102 -176590752 - AluSq SINE Alu -32 281 1 2348 126 138 59 chr2 74097102 74097455 -176590399 + MLT2B2 LTR ERVL 113 515 0 395 353 46 6 chr2 74098419 74098592 -176589262 - MER5A DNA MER1_type -6 183 4 858 236 72 85 chr2 74098829 74099041 -176588813 + MLT1H1 LTR MaLR 76 282 -273 267 54 0 0 chr2 74099041 74099078 -176588776 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 858 236 72 85 chr2 74099078 74099267 -176588587 + MLT1H1 LTR MaLR 282 472 -83 421 164 0 0 chr2 74099322 74099395 -176588459 - MLT1H1 LTR MaLR -13 542 470 206 301 139 54 chr2 74099415 74099581 -176588273 - MIR SINE MIR -21 241 62 229 211 19 0 chr2 74100493 74100545 -176587309 + (TG)n Simple_repeat Simple_repeat 2 54 0 256 314 49 51 chr2 74101301 74101427 -176586427 - MIR SINE MIR -62 146 45 494 216 11 119 chr2 74101454 74101610 -176586244 + MER5B DNA MER1_type 6 141 -37 323 252 232 26 chr2 74101610 74101761 -176586093 + MER5A DNA MER1_type 2 183 -6 1911 128 0 0 chr2 74102772 74103060 -176584794 - AluSx SINE Alu -4 308 21 231 216 0 125 chr2 74103569 74103657 -176584197 - MIR SINE MIR -1 261 185 277 197 70 14 chr2 74106344 74106415 -176581439 + MER5A DNA MER1_type 47 121 -68 651 242 38 6 chr2 74108453 74108610 -176579244 - MER5B DNA MER1_type 0 178 17 381 247 133 12 chr2 74108825 74108991 -176578863 - L1ME4a LINE L1 0 6121 5936 400 287 143 50 chr2 74109026 74110003 -176577851 - L1ME4a LINE L1 -769 5377 4310 2686 155 47 25 chr2 74110058 74110547 -176577307 + LTR8A LTR ERV1 71 570 -157 514 209 0 0 chr2 74110551 74110637 -176577217 + AluJ/FLAM SINE Alu 3 88 -224 907 152 39 79 chr2 74110648 74110826 -176577028 + LTR8A LTR ERV1 557 727 0 947 150 0 13 chr2 74111040 74111193 -176576661 - AluJo SINE Alu -151 161 11 225 308 48 0 chr2 74111256 74111402 -176576452 - L1ME4a LINE L1 -2294 3852 3700 182 293 129 17 chr2 74111664 74111780 -176576074 - L2 LINE L2 -665 2649 2521 1976 102 16 33 chr2 74112206 74112510 -176575344 - AluY SINE Alu -12 299 1 1740 152 14 3 chr2 74113433 74113722 -176574132 - AluJb SINE Alu -10 302 11 872 234 99 0 chr2 74114676 74114877 -176572977 + MIR SINE MIR 12 232 -30 236 267 89 30 chr2 74116319 74116420 -176571434 - MIR SINE MIR -117 145 39 369 0 0 0 chr2 74116777 74116818 -176571036 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 207 217 22 22 chr2 74117834 74117880 -176569974 + MIR SINE MIR 95 140 -68 318 371 11 38 chr2 74117906 74118005 -176569849 - MIR3 SINE MIR -18 190 97 2009 107 31 28 chr2 74118005 74118295 -176569559 + AluSx SINE Alu 8 298 -14 318 371 11 38 chr2 74118295 74118381 -176569473 - MIR3 SINE MIR -111 97 10 374 299 93 62 chr2 74118994 74119286 -176568568 + L1ME LINE L1 5426 5732 -389 2005 154 3 0 chr2 74119286 74119579 -176568275 - AluJb SINE Alu -18 294 1 374 299 93 62 chr2 74119579 74119640 -176568214 + L1ME LINE L1 5732 5790 -331 31 0 0 0 chr2 74119670 74119701 -176568153 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr2 74120765 74120790 -176567064 + AT_rich Low_complexity Low_complexity 1 25 0 269 289 173 19 chr2 74121843 74121947 -176565907 - L2 LINE L2 -42 3230 3111 380 181 267 0 chr2 74121964 74122080 -176565774 - MER5A DNA MER1_type 0 189 43 639 273 76 31 chr2 74122242 74122531 -176565323 + MER90 LTR ERV1 248 549 -26 299 225 157 11 chr2 74123052 74123141 -176564713 - MER91A DNA MER1_type -4 192 91 568 221 193 21 chr2 74123146 74123291 -176564563 - MER91A DNA MER1_type -25 171 2 314 191 110 59 chr2 74123313 74123449 -176564405 + L2 LINE L2 2214 2356 -958 354 324 35 12 chr2 74123528 74123698 -176564156 + L2 LINE L2 2673 2846 -468 268 293 60 67 chr2 74124101 74124251 -176563603 + MIR3 SINE MIR 57 205 -3 2111 83 41 0 chr2 74126062 74126328 -176561526 + AluSc SINE Alu 1 277 -32 1419 167 27 14 chr2 74127611 74127905 -176559949 + L1MA4 LINE L1 6002 6299 -1 329 312 35 40 chr2 74128479 74128652 -176559202 + HAL1 LINE L1 1368 1539 -968 1946 173 0 0 chr2 74128681 74128982 -176558872 + AluJo SINE Alu 1 301 -11 504 340 88 46 chr2 74128987 74129318 -176558536 + L1ME4a LINE L1 2245 2589 -3557 604 321 82 37 chr2 74129368 74131088 -176556766 + L1ME4a LINE L1 2720 4517 -1629 395 252 71 8 chr2 74131109 74131236 -176556618 - L2 LINE L2 -4 3309 3175 234 219 0 105 chr2 74131242 74131347 -176556507 + L1ME4a LINE L1 4557 4650 -1496 2259 136 0 0 chr2 74131349 74131650 -176556204 - AluSx SINE Alu -11 301 1 487 325 56 34 chr2 74131753 74132021 -176555833 + L1ME4a LINE L1 5087 5360 -786 1872 172 23 0 chr2 74132028 74132439 -176555415 + AluJb SINE Alu 1 418 0 871 278 58 27 chr2 74132470 74132890 -176554964 + L1P1 LINE L1 5385 5814 -341 383 276 54 70 chr2 74132892 74133077 -176554777 + L1ME4a LINE L1 5926 6107 -14 256 204 0 163 chr2 74134034 74134132 -176553722 + MIR3 SINE MIR 111 192 -16 1011 73 15 0 chr2 74136057 74136193 -176551661 + L1PA10 LINE L1 6027 6164 -4 209 289 26 13 chr2 74136936 74137012 -176550842 + MIR SINE MIR 21 97 -111 791 149 123 13 chr2 74137502 74137656 -176550198 - MER5B DNA MER1_type 0 178 8 2075 166 14 59 chr2 74137859 74138281 -176549573 + MER57A LTR ERV1 1 403 0 744 251 27 5 chr2 74138649 74138836 -176549018 + MIR3 SINE MIR 9 199 -9 1143 241 23 12 chr2 74139815 74140072 -176547782 + MIR SINE MIR 2 261 -1 305 268 12 12 chr2 74140360 74140442 -176547412 + MER21B LTR ERV1 1 82 -781 503 253 45 69 chr2 74140506 74140708 -176547146 + MER21B LTR ERV1 98 294 -569 766 267 53 93 chr2 74140772 74141225 -176546629 + MER21B LTR ERV1 303 737 -126 414 253 100 74 chr2 74141242 74141345 -176546509 - MIR SINE MIR -27 235 136 2487 99 0 0 chr2 74141345 74141657 -176546197 + AluSx SINE Alu 1 312 0 414 253 100 74 chr2 74141657 74141782 -176546072 - MIR SINE MIR -126 136 1 * 803 226 105 67 chr2 74141782 74142092 -176545762 + L3 LINE CR1 1250 1571 -6 2289 103 0 3 chr2 74142514 74142815 -176545039 + AluSc SINE Alu 1 300 -9 231 257 92 37 chr2 74145725 74145834 -176542020 + L2 LINE L2 3154 3268 -4 416 316 50 7 chr2 74147871 74148010 -176539844 - MIR SINE MIR -115 147 3 509 296 80 18 chr2 74149891 74150165 -176537689 + MLT1J2 LTR MaLR 1 291 -159 318 301 36 112 chr2 74150285 74150481 -176537373 - HAL1b LINE L1 -1166 182 2 517 249 11 50 chr2 74151430 74151611 -176536243 - MER104 DNA Tc2 -6 174 1 754 264 71 39 chr2 74152280 74152534 -176535320 + MIR SINE MIR 1 262 0 181 182 73 55 chr2 74153348 74153403 -176534451 - L2 LINE L2 -8 3264 3209 865 252 87 8 chr2 74154195 74154437 -176533417 + MIR SINE MIR 2 262 0 1091 203 103 47 chr2 74154603 74154943 -176532911 + MLT1C LTR MaLR 34 392 -75 571 234 130 0 chr2 74154947 74155107 -176532747 - MER5A DNA MER1_type -2 187 4 2446 29 0 0 chr2 74155127 74155399 -176532455 + AluYa5 SINE Alu 39 310 -1 334 275 120 7 chr2 74156203 74156345 -176531509 + MER117 DNA MER1_type 6 163 -34 225 0 0 0 chr2 74156573 74156598 -176531256 + (TCTCCC)n Simple_repeat Simple_repeat 2 26 0 2207 103 0 4 chr2 74156796 74157077 -176530777 + AluSx SINE Alu 1 280 -32 378 0 0 0 chr2 74157077 74157119 -176530735 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 311 237 66 0 chr2 74157499 74157575 -176530279 - MIR3 SINE MIR -19 189 109 754 241 210 36 chr2 74158272 74158658 -176529196 + LTR33A LTR ERVL 71 523 0 1941 153 81 0 chr2 74159869 74160190 -176527664 + MER7A DNA MER2_type 1 345 -1 291 302 12 23 chr2 74160666 74160752 -176527102 + L2 LINE L2 3182 3266 -47 188 321 123 52 chr2 74163941 74164153 -176523701 + L2 LINE L2 3046 3272 0 1697 141 93 28 chr2 74164896 74165186 -176522668 - AluSx SINE Alu -3 309 1 7475 30 0 0 chr2 74166059 74166921 -176520933 + L1PA5 LINE L1 5293 6154 0 535 274 25 13 chr2 74167083 74167240 -176520614 - MIR SINE MIR -76 186 28 6181 98 26 1 chr2 74168003 74169219 -176518635 + L1PA13 LINE L1 4924 6158 -5 223 153 28 42 chr2 74169789 74169861 -176517993 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 2209 133 0 0 chr2 74169874 74170183 -176517671 - AluSx SINE Alu -3 309 1 732 256 19 39 chr2 74170832 74171039 -176516815 + MLT1I LTR MaLR 199 401 -8 23 33 0 0 chr2 74171615 74171645 -176516209 + AT_rich Low_complexity Low_complexity 1 30 0 287 252 35 61 chr2 74172930 74173045 -176514809 - L2 LINE L2 -339 2974 2863 321 295 70 31 chr2 74173124 74173253 -176514601 - L2 LINE L2 0 3313 3180 227 130 43 43 chr2 74173314 74173360 -176514494 + L1MC4 LINE L1 7164 7209 -833 * 621 117 48 186 chr2 74173337 74173568 -176514286 + L1MC4 LINE L1 7697 7895 -147 344 319 122 33 chr2 74173691 74174120 -176513734 - L2 LINE L2 -300 2972 2491 2563 57 0 0 chr2 74174188 74174487 -176513367 + AluY SINE Alu 1 299 -12 258 385 0 0 chr2 74175338 74175429 -176512425 + L2 LINE L2 2993 3083 -189 452 225 183 26 chr2 74175602 74175793 -176512061 - MIR SINE MIR -8 254 34 198 289 53 0 chr2 74176114 74176190 -176511664 - L2 LINE L2 -48 3224 3145 2572 60 0 3 chr2 74176191 74176493 -176511361 - AluY SINE Alu -10 301 1 2242 104 52 25 chr2 74178176 74178541 -176509313 - THE1C LTR MaLR 0 375 1 748 276 104 59 chr2 74178657 74179146 -176508708 + MLT1J LTR MaLR 1 511 0 319 241 106 14 chr2 74179174 74179315 -176508539 + MER103 DNA DNA 10 163 -3 1292 225 42 87 chr2 74179520 74179992 -176507862 + MLT1C LTR MaLR 17 467 0 378 309 7 7 chr2 74180268 74180404 -176507450 + MIR3 SINE MIR 67 202 -6 205 323 45 26 chr2 74180846 74181001 -176506853 - L3 LINE CR1 -352 1225 1068 419 257 17 74 chr2 74181513 74181688 -176506166 + MIR SINE MIR 98 262 0 699 258 90 38 chr2 74181702 74181969 -176505885 - L2 LINE L2 -759 2555 2275 522 242 153 0 chr2 74181981 74182138 -176505716 + MER5A DNA MER1_type 9 189 0 1011 284 248 12 chr2 74182142 74182990 -176504864 - L2 LINE L2 -1052 2262 1215 936 307 132 16 chr2 74183530 74184489 -176503365 + L2 LINE L2 353 1423 -1891 330 267 254 25 chr2 74184535 74184775 -176503079 + L2 LINE L2 3017 3311 -2 2494 81 7 0 chr2 74184962 74185271 -176502583 + AluSq SINE Alu 1 311 -2 2208 122 3 0 chr2 74186007 74186311 -176501543 - AluSq SINE Alu -8 305 1 517 298 35 39 chr2 74186318 74186573 -176501281 + HAL1 LINE L1 2254 2507 0 1211 162 5 15 chr2 74187792 74187990 -176499864 + AluJo SINE Alu 94 289 -23 1989 167 105 0 chr2 74188630 74189019 -176498835 + MSTB1 LTR MaLR 1 430 -2 228 325 72 10 chr2 74190058 74190252 -176497602 + HAL1b LINE L1 403 608 -740 2097 102 53 0 chr2 74190510 74190793 -176497061 + AluSx SINE Alu 1 298 -14 2368 82 7 0 chr2 74190860 74191152 -176496702 - AluY SINE Alu -17 294 1 21 36 0 0 chr2 74191284 74191312 -176496542 + AT_rich Low_complexity Low_complexity 1 28 0 462 229 10 0 chr2 74191611 74191707 -176496147 - MER81 DNA DNA -1 113 17 301 223 19 10 chr2 74191728 74191831 -176496023 + (TA)n Simple_repeat Simple_repeat 2 105 0 2516 79 0 0 chr2 74191886 74192189 -176495665 - AluSq SINE Alu -10 303 1 447 290 47 12 chr2 74192864 74193033 -176494821 - MIR SINE MIR -49 213 39 2454 86 0 0 chr2 74193068 74193371 -176494483 - AluSx SINE Alu -9 303 1 879 181 0 0 chr2 74193821 74193970 -176493884 + FRAM SINE Alu 1 149 -17 2127 147 0 0 chr2 74194254 74194566 -176493288 + AluSx SINE Alu 1 312 0 342 364 0 0 chr2 74194681 74194813 -176493041 + L2 LINE L2 3136 3267 -5 21 0 0 0 chr2 74195124 74195145 -176492709 + AT_rich Low_complexity Low_complexity 1 21 0 207 68 0 68 chr2 74196128 74196172 -176491682 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 236 100 25 0 chr2 74196678 74196718 -176491136 + (GGGGA)n Simple_repeat Simple_repeat 2 42 0 21 36 0 0 chr2 74197449 74197477 -176490377 + GC_rich Low_complexity Low_complexity 1 28 0 360 235 0 42 chr2 74197486 74197652 -176490202 + (CCCCG)n Simple_repeat Simple_repeat 5 163 0 469 261 0 0 chr2 74198044 74198159 -176489695 + MIR SINE MIR 30 144 -64 310 257 18 35 chr2 74198442 74198555 -176489299 + MER5A DNA MER1_type 77 187 -2 1069 204 9 5 chr2 74199133 74199354 -176488500 - MIR SINE MIR -33 229 8 2337 101 0 0 chr2 74199382 74199680 -176488174 - AluSx SINE Alu -14 298 1 394 113 52 0 chr2 74199799 74199896 -176487958 + (TA)n Simple_repeat Simple_repeat 2 103 0 2194 224 68 28 chr2 74200375 74200915 -176486939 + MLT1E LTR MaLR 31 592 -1 1237 225 80 25 chr2 74200965 74201289 -176486565 + LTR16C LTR ERVL 148 489 -2 1768 198 54 8 chr2 74201541 74201914 -176485940 + MLT1B LTR MaLR 1 390 0 2410 111 16 30 chr2 74202726 74203095 -176484759 + THE1B LTR MaLR 1 364 0 453 192 91 0 chr2 74203225 74203324 -176484530 + MLT2B1 LTR ERVL 54 161 -253 * 709 259 86 10 chr2 74203322 74203519 -176484335 + MLT2B1 LTR ERVL 289 500 -15 3330 188 101 146 chr2 74203530 74203790 -176484064 + MLT1B-int LTR MaLR 1 271 -1100 867 144 0 0 chr2 74203790 74203915 -176483939 + AluSg/x SINE Alu 177 301 -9 3330 188 101 146 chr2 74203915 74204127 -176483727 + MLT1B-int LTR MaLR 271 491 -880 1979 164 13 0 chr2 74204127 74204426 -176483428 + AluSx SINE Alu 1 303 -9 3330 188 101 146 chr2 74204426 74205259 -176482595 + MLT1B-int LTR MaLR 491 1367 -4 1597 196 40 28 chr2 74205270 74205622 -176482232 + MLT1A2 LTR MaLR 1 356 -18 453 277 58 0 chr2 74205625 74205762 -176482092 + MIR SINE MIR 97 241 -21 2341 102 0 0 chr2 74206186 74206481 -176481373 + AluSp SINE Alu 5 299 -14 297 253 122 15 chr2 74206730 74206936 -176480918 + L1MD2 LINE L1 5499 5668 -453 502 250 92 0 chr2 74207399 74207563 -176480291 + MIR SINE MIR 57 235 -27 36 40 0 0 chr2 74207663 74207713 -176480141 + AT_rich Low_complexity Low_complexity 1 50 0 990 186 61 24 chr2 74210457 74210704 -176477150 + L1MC4 LINE L1 6817 7072 -970 1612 210 54 20 chr2 74210714 74211104 -176476750 + L1MD2 LINE L1 5731 6133 -226 706 225 19 0 chr2 74211114 74211274 -176476580 + L1MD2 LINE L1 6197 6359 0 2342 233 83 5 chr2 74211278 74211892 -176475962 + L1MC4 LINE L1 7239 7900 -142 26 0 0 0 chr2 74211944 74211970 -176475884 + AT_rich Low_complexity Low_complexity 1 26 0 2231 93 35 0 chr2 74211970 74212259 -176475595 + AluSg SINE Alu 1 299 -11 2069 97 45 14 chr2 74212884 74213173 -176474681 - AluSx SINE Alu -14 298 1 628 286 13 0 chr2 74213640 74213794 -176474060 - MIR SINE MIR -94 168 13 2350 64 3 20 chr2 74215488 74215786 -176472068 - AluY SINE Alu -17 294 2 571 260 143 39 chr2 74216578 74216809 -176471045 + MIR SINE MIR 8 262 0 362 282 159 27 chr2 74217273 74217493 -176470361 + MIR SINE MIR 2 250 -12 623 292 85 11 chr2 74217789 74218429 -176469425 + L1ME4a LINE L1 5315 6022 -99 22 0 0 0 chr2 74219773 74219795 -176468059 + GC_rich Low_complexity Low_complexity 1 22 0 182 37 37 0 chr2 74219883 74219910 -176467944 + (CGGGGG)n Simple_repeat Simple_repeat 4 31 0 221 280 0 96 chr2 74220028 74220153 -176467701 - MER5B DNA MER1_type -10 168 56 306 251 54 96 chr2 74220204 74220371 -176467483 - L1MC4 LINE L1 -2 8040 7881 1774 159 10 10 chr2 74220729 74221043 -176466811 - L1PA16 LINE L1 -6 6160 5847 3981 217 127 43 chr2 74221048 74221620 -176466234 - L1MC4 LINE L1 -138 7904 7381 2472 69 0 10 chr2 74221620 74221926 -176465928 + AluY SINE Alu 1 303 -8 3981 217 127 43 chr2 74221926 74222687 -176465167 - L1MC4 LINE L1 -661 7381 6459 21 0 0 0 chr2 74222907 74222928 -176464926 + AT_rich Low_complexity Low_complexity 1 21 0 560 251 170 32 chr2 74223335 74223746 -176464108 - MLT1J LTR MaLR -40 471 4 348 179 12 95 chr2 74223832 74223916 -176463938 + L2 LINE L2 3235 3311 -2 345 271 83 0 chr2 74226484 74226580 -176461274 - MIR SINE MIR -60 148 45 348 268 27 82 chr2 74227069 74227184 -176460670 + MIR SINE MIR 1 121 -141 2378 103 20 8 chr2 74227184 74227535 -176460319 - THE1A LTR MaLR 0 355 1 12437 83 5 0 chr2 74227535 74229107 -176458747 - THE1A-int LTR MaLR 0 1580 1 2142 113 65 9 chr2 74229107 74229443 -176458411 - THE1A LTR MaLR 0 355 1 348 268 27 82 chr2 74229443 74229569 -176458285 + MIR SINE MIR 118 230 -32 631 341 41 0 chr2 74229579 74229799 -176458055 - MIR SINE MIR -32 230 2 612 233 0 23 chr2 74231374 74231507 -176456347 + L2 LINE L2 3182 3311 -2 2006 132 14 0 chr2 74231559 74231870 -176455984 + AluSx SINE Alu 11 312 0 1935 153 3 3 chr2 74231886 74232174 -176455680 + AluJb SINE Alu 1 288 -24 375 313 47 48 chr2 74233427 74233716 -176454138 + L1M4 LINE L1 2426 2767 -3379 23 0 0 0 chr2 74233726 74233749 -176454105 + AT_rich Low_complexity Low_complexity 1 23 0 3404 60 2 20 chr2 74233749 74234117 -176453737 - L1PA6 LINE L1 -9 6145 5785 2338 67 3 13 chr2 74234117 74234417 -176453437 - AluY SINE Alu -14 297 1 3404 60 2 20 chr2 74234417 74234494 -176453360 - L1PA6 LINE L1 -369 5785 5708 8115 134 39 40 chr2 74234613 74234749 -176453105 + Tigger2 DNA MER2_type 2 137 -2581 2013 140 0 23 chr2 74234749 74235049 -176452805 - AluSx SINE Alu -19 293 1 8115 134 39 40 chr2 74235049 74236107 -176451747 + Tigger2 DNA MER2_type 137 1195 -1523 2069 141 3 10 chr2 74236107 74236411 -176451443 - AluJb SINE Alu -10 302 1 8115 134 39 40 chr2 74236411 74236740 -176451114 + Tigger2 DNA MER2_type 1195 1523 -1195 1678 181 10 10 chr2 74236740 74237044 -176450810 + AluJo SINE Alu 1 304 -8 348 98 0 0 chr2 74237264 74237315 -176450539 + Alu SINE Alu 241 291 -11 2065 118 0 0 chr2 74237347 74237619 -176450235 + AluSx SINE Alu 1 272 -40 336 257 99 0 chr2 74237827 74237928 -176449926 - L2 LINE L2 -1 3271 3161 322 136 53 30 chr2 74238698 74238830 -176449024 + (CA)n Simple_repeat Simple_repeat 2 136 0 2560 72 3 0 chr2 74239520 74239825 -176448029 + AluSq SINE Alu 1 306 -7 1538 154 30 75 chr2 74240981 74241286 -176446568 + AluJb SINE Alu 1 291 -21 2219 113 3 10 chr2 74242669 74243158 -176444696 - AluSq SINE Alu 0 313 5 260 364 84 31 chr2 74243164 74243578 -176444276 - L2 LINE L2 -251 3021 2583 617 204 129 0 chr2 74243578 74243725 -176444129 + MER5A DNA MER1_type 1 166 -23 519 206 54 60 chr2 74243753 74243937 -176443917 + MER58A DNA MER1_type 27 209 -15 508 208 45 51 chr2 74243947 74244125 -176443729 + MER5B DNA MER1_type 2 178 0 586 284 85 15 chr2 74244729 74244930 -176442924 - MIR SINE MIR -34 228 14 1357 187 158 19 chr2 74247400 74247613 -176440241 + L1ME1 LINE L1 4780 4962 -1184 2519 68 7 7 chr2 74247613 74247923 -176439931 + AluY SINE Alu 1 310 -1 1357 187 158 19 chr2 74247923 74248126 -176439728 + L1ME1 LINE L1 4962 5254 -892 722 207 82 43 chr2 74248126 74248407 -176439447 + L1ME1 LINE L1 5892 6333 -1 256 214 4 67 chr2 74249429 74249523 -176438331 - MIR SINE MIR -116 92 4 800 180 7 0 chr2 74250218 74250357 -176437497 - MER2 DNA MER2_type -204 141 2 1481 215 138 110 chr2 74250358 74250909 -176436945 + MER21B LTR ERV1 9 590 -273 1555 133 3 123 chr2 74250909 74251241 -176436613 - AluJo SINE Alu -10 292 1 1481 215 138 110 chr2 74251241 74251462 -176436392 + MER21B LTR ERV1 590 803 -60 255 31 0 0 chr2 74252293 74252325 -176435529 + (TG)n Simple_repeat Simple_repeat 2 33 0 2212 121 16 3 chr2 74252929 74253236 -176434618 + AluSx SINE Alu 1 311 -1 265 227 0 40 chr2 74253236 74253311 -176434543 + MLT1K LTR MaLR 364 435 -153 278 289 137 42 chr2 74253383 74253573 -176434281 + L2 LINE L2 2498 2705 -609 4228 130 121 118 chr2 74253574 74254033 -176433821 + L1MC3 LINE L1 6625 7081 -704 230 324 0 29 chr2 74254033 74254135 -176433719 + MLT1I LTR MaLR 13 111 -456 4228 130 121 118 chr2 74254135 74254732 -176433122 + L1MC3 LINE L1 7081 7785 0 1660 166 28 14 chr2 74254734 74255017 -176432837 - AluJb SINE Alu -25 287 1 1875 186 0 7 chr2 74255046 74255352 -176432502 + AluJo SINE Alu 1 304 -8 243 0 0 0 chr2 74255553 74255580 -176432274 + (TTAAA)n Simple_repeat Simple_repeat 4 30 0 1500 166 8 12 chr2 74255580 74255827 -176432027 - AluJo SINE Alu -33 279 34 231 262 57 35 chr2 74255846 74255987 -176431867 - LTR67 LTR ERVL -408 149 6 290 305 175 7 chr2 74256103 74256392 -176431462 + L2 LINE L2 2719 3047 -225 194 128 26 0 chr2 74256913 74256952 -176430902 + GA-rich Low_complexity Low_complexity 1 40 0 2284 113 3 0 chr2 74257854 74258147 -176429707 - AluSx SINE Alu -18 294 1 1501 229 67 49 chr2 74258380 74258870 -176428984 - LTR53 LTR ERVL 0 519 21 327 328 113 38 chr2 74261309 74261547 -176426307 - MIR SINE MIR -1 261 6 230 135 173 0 chr2 74261613 74261665 -176426189 + MLT1I LTR MaLR 1 61 -348 520 274 105 26 chr2 74261761 74262027 -176425827 + MLT1I LTR MaLR 113 399 -10 224 211 0 39 chr2 74263352 74263404 -176424450 - L2 LINE L2 0 3272 3223 439 317 63 0 chr2 74265250 74265392 -176422462 - L2 LINE L2 0 3272 3122 432 356 39 30 chr2 74265459 74265821 -176422033 - L2 LINE L2 -337 2977 2613 182 208 21 0 chr2 74266220 74266268 -176421586 + GA-rich Low_complexity Low_complexity 4 52 0 281 140 18 0 chr2 74266287 74266344 -176421510 + (TGGA)n Simple_repeat Simple_repeat 2 59 0 34 55 0 0 chr2 74268954 74269009 -176418845 + AT_rich Low_complexity Low_complexity 1 55 0 1999 132 4 4 chr2 74269034 74269341 -176418513 + AluSx SINE Alu 1 307 0 2278 97 0 0 chr2 74269524 74269842 -176418012 - AluY SINE Alu 0 311 1 380 274 46 102 chr2 74270020 74270305 -176417549 + MLT1K LTR MaLR 319 587 -1 247 293 40 0 chr2 74270691 74270790 -176417064 - L1M4 LINE L1 -1300 4846 4744 352 233 116 0 chr2 74270791 74270877 -176416977 - MLT1B LTR MaLR -294 96 1 1233 246 117 19 chr2 74270895 74271366 -176416488 + L1MEc LINE L1 833 1349 -5047 39295 79 11 6 chr2 74271386 74277502 -176410352 + L1PA6 LINE L1 11 6150 -4 970 245 50 11 chr2 74277494 74277776 -176410078 + L1MC3 LINE L1 5838 6130 -1655 * 4461 124 33 62 chr2 74277778 74278569 -176409285 + L1PA16 LINE L1 5315 6082 -84 180 0 0 0 chr2 74278597 74278617 -176409237 + (TTG)n Simple_repeat Simple_repeat 2 21 0 842 186 19 13 chr2 74278622 74278778 -176409076 - FAM SINE Alu -17 158 2 1155 184 31 14 chr2 74278927 74279150 -176408704 + MLT1F1 LTR MaLR 341 567 0 448 318 58 22 chr2 74279243 74279466 -176408388 + ERVL LTR ERVL 5197 5427 -337 2329 80 7 0 chr2 74279564 74279853 -176408001 + AluSx SINE Alu 1 291 -21 285 293 17 17 chr2 74280280 74280396 -176407458 + LTR67 LTR ERVL 433 548 -9 2121 124 0 0 chr2 74280397 74280703 -176407151 + AluSx SINE Alu 1 306 0 274 291 163 20 chr2 74281240 74281535 -176406319 - L1M4 LINE L1 -1311 6254 5918 510 146 0 0 chr2 74282388 74282498 -176405356 + (TA)n Simple_repeat Simple_repeat 2 111 0 2072 109 7 0 chr2 74282649 74282924 -176404930 + AluSx SINE Alu 35 311 -1 582 303 38 0 chr2 74283256 74283441 -176404413 + MER63A DNA MER1_type 19 210 0 263 314 198 10 chr2 74284053 74284260 -176403594 + L2 LINE L2 2701 2946 -368 180 77 0 0 chr2 74284263 74284289 -176403565 + (TATG)n Simple_repeat Simple_repeat 2 27 0 735 213 69 127 chr2 74284294 74284480 -176403374 - L1MC4 LINE L1 -128 7914 7719 1824 163 24 3 chr2 74284480 74284768 -176403086 + AluJb SINE Alu 1 294 -18 735 213 69 127 chr2 74284768 74285046 -176402808 - L1MC4 LINE L1 -323 7719 7477 2129 202 67 64 chr2 74285696 74286261 -176401593 + L1MEc LINE L1 34 600 -5796 1176 69 13 19 chr2 74286265 74286424 -176401430 + L1PA10 LINE L1 6006 6163 -5 9393 170 27 42 chr2 74286444 74288049 -176399805 - L1M4 LINE L1 -1913 5652 4090 2017 157 136 29 chr2 74288049 74288462 -176399392 + MSTB2 LTR MaLR 1 457 0 9393 170 27 42 chr2 74288462 74289170 -176398684 - L1M4 LINE L1 -3475 4090 3373 871 110 0 22 chr2 74289170 74289306 -176398548 - THE1C LTR MaLR -43 332 200 660 92 0 20 chr2 74289315 74289413 -176398441 + L1PB3 LINE L1 6057 6152 -2 1103 159 169 0 chr2 74289424 74289631 -176398223 + MSTB LTR MaLR 185 426 0 599 265 82 16 chr2 74290394 74290639 -176397215 + MIR SINE MIR 2 262 0 785 139 0 0 chr2 74290649 74290764 -176397090 + FLAM_A SINE Alu 1 115 -18 31 0 0 0 chr2 74290768 74290799 -176397055 + AT_rich Low_complexity Low_complexity 1 31 0 1205 240 135 24 chr2 74292275 74292691 -176395163 - MLT1C LTR MaLR 0 467 6 2122 121 0 7 chr2 74292747 74293087 -176394767 - AluSq SINE Alu 0 338 1 2256 125 0 0 chr2 74293105 74293417 -176394437 - AluSx SINE Alu 0 312 1 396 0 0 0 chr2 74293609 74293653 -176394201 + (CA)n Simple_repeat Simple_repeat 2 45 0 364 321 136 18 chr2 74293847 74294127 -176393727 + L2 LINE L2 2928 3240 -32 745 298 12 16 chr2 74294128 74294383 -176393471 - MIR SINE MIR -6 256 3 610 65 13 0 chr2 74294766 74294843 -176393011 - AluSq/x SINE Alu -181 131 54 1155 47 87 7 chr2 74294844 74294993 -176392861 + AluSg/x SINE Alu 140 300 -12 612 219 208 45 chr2 74295010 74295130 -176392724 + L1MC5 LINE L1 7309 7408 -553 315 49 0 0 chr2 74295130 74295171 -176392683 + (CA)n Simple_repeat Simple_repeat 2 42 0 612 219 208 45 chr2 74295171 74295356 -176392498 + L1MC5 LINE L1 7408 7562 -399 1964 132 3 21 chr2 74295356 74295673 -176392181 - AluJb SINE Alu 0 312 1 612 219 208 45 chr2 74295673 74295740 -176392114 + L1MC5 LINE L1 7562 7744 -217 269 214 143 20 chr2 74295752 74295850 -176392004 + L1MC5 LINE L1 7789 7898 -63 1642 174 3 35 chr2 74296074 74296385 -176391469 + AluJo SINE Alu 1 301 -11 387 229 143 12 chr2 74296535 74296686 -176391168 + HAL1 LINE L1 323 693 -1814 * 690 230 125 8 chr2 74296674 74296922 -176390932 + HAL1 LINE L1 1894 2170 -337 262 279 173 24 chr2 74297070 74297196 -176390658 - L1M4 LINE L1 -3558 2588 2482 2316 47 0 29 chr2 74297196 74297473 -176390381 + AluY SINE Alu 29 297 -14 262 279 173 24 chr2 74297473 74297505 -176390349 - L1M4 LINE L1 -3664 2482 2456 1866 138 20 20 chr2 74297505 74297809 -176390045 + AluJo SINE Alu 2 305 -7 262 279 173 24 chr2 74297809 74297979 -176389875 - L1M4 LINE L1 -3690 2456 2210 1476 204 26 66 chr2 74298171 74298499 -176389355 + MLT1A1 LTR MaLR 3 316 -49 2146 105 3 55 chr2 74298499 74298824 -176389030 - AluSx SINE Alu -4 308 1 1476 204 26 66 chr2 74298824 74298873 -176388981 + MLT1A1 LTR MaLR 316 365 0 201 39 0 0 chr2 74299382 74299408 -176388446 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1749 171 3 11 chr2 74299408 74299695 -176388159 - AluJb SINE Alu -27 285 1 948 161 7 0 chr2 74299697 74299852 -176388002 - MLT1A1 LTR MaLR -209 156 1 380 306 81 0 chr2 74301090 74301250 -176386604 + MIR SINE MIR 4 176 -86 259 122 0 26 chr2 74301373 74301423 -176386431 - L1M3 LINE L1 -524 5659 5612 3669 70 40 14 chr2 74301696 74302194 -176385660 + MER9 LTR ERVK 1 511 0 1729 168 3 14 chr2 74302418 74302710 -176385144 - AluJo SINE Alu -13 299 11 384 236 0 0 chr2 74303114 74303186 -176384668 - MER91A DNA MER1_type -119 77 6 370 318 45 20 chr2 74303700 74303898 -176383956 + L1ME4a LINE L1 5632 5834 -287 544 301 53 41 chr2 74304017 74304350 -176383504 + L1ME LINE L1 5367 5699 -422 2123 130 3 0 chr2 74304350 74304642 -176383212 - AluJb SINE Alu -19 293 1 544 301 53 41 chr2 74304642 74304759 -176383095 + L1ME LINE L1 5699 5813 -308 2159 128 10 0 chr2 74304798 74305095 -176382759 + AluSx SINE Alu 1 300 -12 38126 87 8 14 chr2 74305095 74311266 -176376588 + L1PA6 LINE L1 17 6150 -4 2482 86 0 3 chr2 74311266 74311590 -176376264 + Tigger1 DNA MER2_type 1735 2057 -361 22 35 0 0 chr2 74311590 74311619 -176376235 + AT_rich Low_complexity Low_complexity 1 29 0 343 238 67 9 chr2 74311861 74311966 -176375888 + L1MC4 LINE L1 6445 6556 -1440 1187 186 18 5 chr2 74311967 74312188 -176375666 + AluJo SINE Alu 85 308 -4 4944 153 17 12 chr2 74312188 74313071 -176374783 + L1MB8 LINE L1 5287 6173 -5 1934 229 128 20 chr2 74313086 74313721 -176374133 + L1MC4 LINE L1 6978 7845 -197 257 197 16 16 chr2 74313759 74313820 -176374034 + L1MC4 LINE L1 7981 8041 -1 1288 227 130 20 chr2 74313845 74314290 -176373564 + L1MC4 LINE L1 7538 8031 -11 26 30 0 0 chr2 74314295 74314328 -176373526 + AT_rich Low_complexity Low_complexity 1 33 0 2222 74 10 33 chr2 74314508 74314807 -176373047 - AluSq SINE Alu -21 292 1 276 313 120 29 chr2 74316078 74316394 -176371460 + L1ME4a LINE L1 5564 5908 -213 22 0 0 0 chr2 74316427 74316449 -176371405 + AT_rich Low_complexity Low_complexity 1 22 0 203 260 26 26 chr2 74316993 74317070 -176370784 + C-rich Low_complexity Low_complexity 6 82 0 252 0 0 0 chr2 74317635 74317663 -176370191 + (CA)n Simple_repeat Simple_repeat 2 29 0 293 322 0 0 chr2 74318659 74318749 -176369105 + L1MB7 LINE L1 5451 5540 -2268 1540 168 7 29 chr2 74319021 74319330 -176368524 + AluJo SINE Alu 1 302 -10 302 179 189 38 chr2 74319735 74319841 -176368013 + L2 LINE L2 3186 3307 -6 267 54 0 0 chr2 74320889 74320926 -176366928 + (CA)n Simple_repeat Simple_repeat 2 38 0 626 274 80 35 chr2 74321498 74321724 -176366130 - MIR SINE MIR -14 248 13 2507 154 27 0 chr2 74321961 74322401 -176365453 + L1MB7 LINE L1 5724 6175 -9 226 257 215 28 chr2 74323783 74323927 -176363927 - MER5B DNA MER1_type -2 176 6 27 29 0 0 chr2 74324863 74324897 -176362957 + AT_rich Low_complexity Low_complexity 1 34 0 551 134 0 10 chr2 74328090 74328187 -176359667 + (TTCC)n Simple_repeat Simple_repeat 3 98 0 26 50 0 0 chr2 74329812 74329852 -176358002 + GC_rich Low_complexity Low_complexity 1 40 0 385 303 0 10 chr2 74330167 74330266 -176357588 - L2 LINE L2 -2 3311 3214 205 362 145 5 chr2 74332659 74332866 -176354988 + MIR SINE MIR 21 256 -6 832 205 6 6 chr2 74335697 74335868 -176351986 - FRAM SINE Alu 0 40 1 180 273 0 0 chr2 74336141 74336185 -176351669 + L2 LINE L2 3269 3312 -1 945 245 21 47 chr2 74337667 74338006 -176349848 - L1MC/D LINE L1 -1989 5819 5490 350 316 91 21 chr2 74338126 74338313 -176349541 - L1MC/D LINE L1 -757 5389 5190 820 211 10 30 chr2 74338329 74338528 -176349326 - AluJo SINE Alu 0 312 118 497 233 0 0 chr2 74338541 74338644 -176349210 - FLAM_C SINE Alu -1 142 40 645 232 16 58 chr2 74338906 74339097 -176348757 - L1MC4a LINE L1 -297 5824 5652 716 215 77 53 chr2 74339177 74339516 -176348338 + L1MC5 LINE L1 7592 7938 -23 289 336 66 18 chr2 74339509 74339954 -176347900 - L1MC4a LINE L1 -743 5403 5214 * 183 42 0 0 chr2 74339967 74339991 -176347863 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 293 360 83 28 chr2 74340403 74340934 -176346920 - L1MC4a LINE L1 -1913 5895 5336 336 330 148 16 chr2 74341335 74341517 -176346337 - L1MC4a LINE L1 -1368 4778 4573 2152 103 0 0 chr2 74341561 74341851 -176346003 + AluSx SINE Alu 1 290 -22 383 269 134 13 chr2 74342238 74342387 -176345467 - MLT1I LTR MaLR 0 409 243 29 28 0 0 chr2 74342538 74342574 -176345280 + AT_rich Low_complexity Low_complexity 1 36 0 1913 116 22 0 chr2 74342581 74342904 -176344950 + AluSx SINE Alu 1 329 0 244 337 33 0 chr2 74342911 74343003 -176344851 + L2 LINE L2 3171 3265 -48 385 321 83 61 chr2 74343004 74343347 -176344507 - L1ME3A LINE L1 -236 5926 5592 2107 109 3 13 chr2 74343347 74343651 -176344203 + AluSx SINE Alu 1 301 -11 385 321 83 61 chr2 74343651 74343985 -176343869 - L1ME3A LINE L1 -570 5592 5300 1970 135 7 0 chr2 74343985 74344282 -176343572 - AluSx SINE Alu -13 299 1 385 321 83 61 chr2 74344282 74344298 -176343556 - L1ME3A LINE L1 -862 5300 5286 555 338 20 61 chr2 74344299 74344417 -176343437 - L1ME3A LINE L1 -920 5226 5105 1913 112 65 3 chr2 74344417 74344711 -176343143 - AluSx SINE Alu 0 312 1 555 338 20 61 chr2 74344711 74344971 -176342883 - L1ME3A LINE L1 -1041 5105 4873 2659 191 55 30 chr2 74345372 74346042 -176341812 - L1MD2 LINE L1 -13 6346 5660 2340 69 0 0 chr2 74346064 74346354 -176341500 + AluSq SINE Alu 15 304 -9 1027 142 0 12 chr2 74346354 74346538 -176341316 + AluSg/x SINE Alu 134 312 0 1079 199 89 33 chr2 74346539 74346876 -176340978 - L1M2 LINE L1 -578 5664 5306 1890 85 118 0 chr2 74347796 74348067 -176339787 + AluY SINE Alu 1 303 -8 1938 107 9 95 chr2 74348106 74348442 -176339412 + AluSg SINE Alu 4 310 0 398 215 24 153 chr2 74348468 74348590 -176339264 + MIR SINE MIR 76 212 -50 762 131 62 46 chr2 74348590 74348720 -176339134 + FLAM_C SINE Alu 2 133 0 398 215 24 153 chr2 74348720 74348742 -176339112 + MIR SINE MIR 212 188 -74 1843 134 3 35 chr2 74348742 74349056 -176338798 + AluJb SINE Alu 3 306 -6 398 215 24 153 chr2 74349056 74349119 -176338735 + MIR SINE MIR 187 257 -5 252 59 0 0 chr2 74349821 74349855 -176337999 + (CA)n Simple_repeat Simple_repeat 1 34 0 233 293 13 13 chr2 74350091 74350166 -176337688 - MIR SINE MIR -111 151 77 225 65 0 0 chr2 74351105 74351136 -176336718 + (CTA)n Simple_repeat Simple_repeat 2 32 0 407 250 256 0 chr2 74351137 74351297 -176336557 - MIR SINE MIR -21 241 41 237 245 20 51 chr2 74351773 74351871 -176335983 + G-rich Low_complexity Low_complexity 4 98 0 237 178 0 0 chr2 74352200 74352245 -176335609 + (TG)n Simple_repeat Simple_repeat 1 45 0 424 294 0 0 chr2 74352443 74352545 -176335309 - MIR SINE MIR -4 258 157 1292 252 92 18 chr2 74352564 74353001 -176334853 - MER21B LTR ERV1 -69 794 326 1607 143 3 88 chr2 74353032 74353361 -176334493 + AluJo SINE Alu 1 301 -11 549 235 33 26 chr2 74353365 74353518 -176334336 - MER21B LTR ERV1 -615 248 95 216 0 0 0 chr2 74353527 74353551 -176334303 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 820 136 0 0 chr2 74353552 74353677 -176334177 - FLAM_C SINE Alu -18 125 1 271 209 2 60 chr2 74353687 74353766 -176334088 - MIR SINE MIR -65 143 77 270 115 135 0 chr2 74353807 74353859 -176333995 - MIR SINE MIR -108 154 96 820 308 115 9 chr2 74353901 74354327 -176333527 - L2 LINE L2 -5 3308 2838 483 294 172 25 chr2 74354358 74354753 -176333101 - L2 LINE L2 -577 2737 2285 271 136 34 0 chr2 74355076 74355135 -176332719 + CT-rich Low_complexity Low_complexity 2 62 0 349 265 105 61 chr2 74355712 74355893 -176331961 + MER5A DNA MER1_type 1 189 0 543 265 63 5 chr2 74355962 74356151 -176331703 - MIR SINE MIR -34 228 29 204 345 24 0 chr2 74356293 74356377 -176331477 + L2 LINE L2 3228 3313 0 539 233 92 31 chr2 74357451 74357614 -176330240 - MER5B DNA MER1_type -5 173 1 326 290 130 0 chr2 74358001 74358132 -176329722 - MIR SINE MIR -4 258 111 468 244 67 12 chr2 74358486 74358588 -176329266 + MER5C DNA MER1_type 1 96 -228 2239 95 0 0 chr2 74358588 74358883 -176328971 + AluSg SINE Alu 1 295 -15 468 244 67 12 chr2 74358883 74358998 -176328856 + MER5C DNA MER1_type 96 322 -2 270 318 102 23 chr2 74359001 74359177 -176328677 + L2 LINE L2 3124 3313 0 860 225 6 0 chr2 74359234 74359403 -176328451 + FRAM SINE Alu 1 170 -6 336 225 0 0 chr2 74359525 74359596 -176328258 - U13 snRNA snRNA -32 72 2 807 255 45 42 chr2 74360717 74361003 -176326851 + MER115 DNA AcHobo 68 354 -339 603 204 66 20 chr2 74361130 74361282 -176326572 - MER5B DNA MER1_type -19 159 1 478 279 65 20 chr2 74361423 74361624 -176326230 - L2 LINE L2 -953 2361 2152 193 54 0 54 chr2 74361808 74361845 -176326009 + (CCCCCA)n Simple_repeat Simple_repeat 5 39 0 258 32 0 0 chr2 74363037 74363048 -176324806 + (CA)n Simple_repeat Simple_repeat 1 11 -257 1463 118 5 0 chr2 74363048 74363259 -176324595 + AluSg/x SINE Alu 86 297 -15 258 32 0 0 chr2 74363259 74363274 -176324580 + (CA)n Simple_repeat Simple_repeat 10 268 0 258 32 0 0 chr2 74363274 74363305 -176324549 + (CA)n Simple_repeat Simple_repeat 2 32 0 415 222 42 78 chr2 74363376 74363543 -176324311 - L1MD3 LINE L1 0 7995 7835 535 222 89 15 chr2 74363544 74363679 -176324175 - L1MD2 LINE L1 -213 6146 6002 318 237 54 11 chr2 74364174 74364267 -176323587 + MER115 DNA AcHobo 597 693 0 243 289 119 38 chr2 74364405 74364564 -176323290 - L2 LINE L2 -86 3186 3015 202 54 27 27 chr2 74364988 74365025 -176322829 + (AGGGGG)n Simple_repeat Simple_repeat 5 41 0 2165 117 3 16 chr2 74370083 74370390 -176317464 - AluJb SINE Alu 0 312 10 363 297 20 0 chr2 74370398 74370499 -176317355 - L2 LINE L2 -14 3299 3197 198 71 0 0 chr2 74371250 74371278 -176316576 + (GA)n Simple_repeat Simple_repeat 2 29 0 430 234 19 9 chr2 74371790 74371897 -176315957 + MIR3 SINE MIR 50 157 -51 197 286 71 0 chr2 74372131 74372187 -176315667 - L3b LINE CR1 -196 1387 1328 218 32 32 0 chr2 74372358 74372389 -176315465 + (CA)n Simple_repeat Simple_repeat 2 33 0 2515 63 3 0 chr2 74373845 74374148 -176313706 - AluY SINE Alu -7 304 1 1411 184 48 25 chr2 74374299 74374615 -176313239 - Charlie4a DNA MER1_type -168 340 18 1516 132 84 30 chr2 74374716 74374883 -176312971 - L1MA5A LINE L1 -4 6293 6102 369 0 0 0 chr2 74374883 74374924 -176312930 + (TA)n Simple_repeat Simple_repeat 1 41 0 1516 132 84 30 chr2 74374924 74375052 -176312802 - L1MA5A LINE L1 -195 6102 5982 188 233 78 132 chr2 74375181 74375310 -176312544 + L2 LINE L2 3142 3263 -9 872 190 44 0 chr2 74375582 74375740 -176312114 + MER5A DNA MER1_type 22 186 -3 181 250 7 154 chr2 74375740 74375784 -176312070 + MIR SINE MIR 121 144 -64 797 143 63 51 chr2 74376465 74376640 -176311214 - MER5A DNA MER1_type -12 177 1 200 222 133 22 chr2 74377270 74377360 -176310494 - L3b LINE CR1 -207 1376 1277 1130 85 0 0 chr2 74377422 74377563 -176310291 - AluSc SINE Alu -13 296 156 925 269 91 43 chr2 74378424 74378885 -176308969 - L1MC4a LINE L1 -1963 5845 5363 30 45 0 0 chr2 74379157 74379201 -176308653 + AT_rich Low_complexity Low_complexity 1 44 0 461 263 106 4 chr2 74379335 74379571 -176308283 - L1MC4a LINE L1 -1311 4835 4576 543 328 83 48 chr2 74379646 74379960 -176307894 - L1MC4a LINE L1 -1662 4484 4160 879 207 101 107 chr2 74379963 74380114 -176307740 - L1MC4 LINE L1 0 8042 7892 2570 74 0 0 chr2 74380114 74380424 -176307430 - AluSq SINE Alu -3 310 1 879 207 101 107 chr2 74380424 74380769 -176307085 - L1MC4 LINE L1 -150 7892 7549 2240 94 40 3 chr2 74380807 74381105 -176306749 + AluSp SINE Alu 1 309 -4 380 242 65 118 chr2 74381133 74381361 -176306493 - L1MC4a LINE L1 -1979 4167 3928 2332 98 0 3 chr2 74381361 74381658 -176306196 + AluSx SINE Alu 1 296 -16 380 242 65 118 chr2 74381658 74381937 -176305917 - L1MC4a LINE L1 -2218 3928 3687 897 250 148 91 chr2 74381983 74382147 -176305707 - L1M4 LINE L1 -1952 4194 4041 1951 131 29 0 chr2 74382147 74382447 -176305407 - AluSx SINE Alu 0 308 1 897 250 148 91 chr2 74382447 74383615 -176304239 - L1M4 LINE L1 -2105 4041 2785 905 132 8 0 chr2 74383835 74383964 -176303890 - FLAM_C SINE Alu -3 130 1 625 181 0 134 chr2 74384340 74384511 -176303343 - AluJb SINE Alu -2 310 163 1592 162 89 3 chr2 74384528 74384855 -176302999 - L1MB7 LINE L1 -19 6165 5811 1322 187 78 25 chr2 74385575 74385773 -176302081 - L1MB7 LINE L1 -356 5822 5636 1836 140 55 0 chr2 74385773 74386066 -176301788 - AluSg SINE Alu -1 309 1 1322 187 78 25 chr2 74386066 74386260 -176301594 - L1MB7 LINE L1 -542 5636 5454 2132 120 27 0 chr2 74386260 74386432 -176301422 - AluSx SINE Alu -3 309 124 189 0 0 0 chr2 74386432 74386453 -176301401 + (TA)n Simple_repeat Simple_repeat 1 21 0 2132 120 27 0 chr2 74386453 74386581 -176301273 - AluSx SINE Alu -188 124 1 1322 187 78 25 chr2 74386581 74386609 -176301245 - L1MB7 LINE L1 -724 5454 5254 579 256 0 0 chr2 74386792 74386921 -176300933 - MIR SINE MIR -14 248 120 215 268 4 11 chr2 74386950 74387037 -176300817 - MIR SINE MIR -99 109 37 224 343 114 18 chr2 74387646 74387812 -176300042 + L2 LINE L2 3073 3254 -18 230 232 53 53 chr2 74388603 74388698 -176299156 - MIR3 SINE MIR -49 159 65 600 217 139 0 chr2 74388856 74389036 -176298818 - MER3 DNA MER1_type -2 207 3 213 231 0 0 chr2 74390999 74391038 -176296816 - MIR SINE MIR -61 147 109 381 301 96 19 chr2 74393016 74393172 -176294682 + MIR SINE MIR 74 241 -21 198 0 0 0 chr2 74393296 74393318 -176294536 + (T)n Simple_repeat Simple_repeat 1 22 0 289 104 0 104 chr2 74394663 74394730 -176293124 + L1MC5 LINE L1 7834 7893 -68 198 0 0 0 chr2 74394730 74394752 -176293102 + (A)n Simple_repeat Simple_repeat 1 22 0 2028 139 3 0 chr2 74394772 74395067 -176292787 + 7SLRNA srpRNA srpRNA 22 317 -3 2019 113 7 3 chr2 74395076 74395358 -176292496 + AluSx SINE Alu 1 283 -29 207 0 0 0 chr2 74395359 74395382 -176292472 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 2335 92 0 46 chr2 74395465 74395792 -176292062 + AluSp SINE Alu 1 312 -1 1619 143 26 55 chr2 74395827 74396135 -176291719 + AluJb SINE Alu 1 299 -13 9664 204 43 42 chr2 74396706 74397819 -176290035 - L1MB8 LINE L1 -1 6413 5302 2274 104 3 0 chr2 74397819 74398117 -176289737 - AluSx SINE Alu -13 299 1 2404 50 0 0 chr2 74398127 74398438 -176289416 - AluY SINE Alu 0 311 1 9664 204 43 42 chr2 74398438 74400511 -176287343 - L1MB8 LINE L1 -1120 5294 3213 2147 141 3 10 chr2 74400511 74400823 -176287031 + AluJb SINE Alu 1 310 -2 9664 204 43 42 chr2 74400823 74401561 -176286293 - L1MB8 LINE L1 -3201 3213 2477 884 176 0 0 chr2 74401567 74401698 -176286156 + FLAM_C SINE Alu 1 131 -12 260 196 20 0 chr2 74401714 74401765 -176286089 - L1MB8 LINE L1 -3905 2477 2426 285 301 36 25 chr2 74401830 74402109 -176285745 - L1MB8 LINE L1 -4024 2360 2079 398 303 62 53 chr2 74402120 74402328 -176285526 - L1MEc LINE L1 -4453 1943 1734 2848 215 56 30 chr2 74402360 74403670 -176284184 - L1M4c LINE L1 -4453 2685 1218 257 218 73 0 chr2 74404286 74404341 -176283513 - MLT1K LTR MaLR -2 586 528 690 186 16 0 chr2 74404795 74404919 -176282935 + MER5B DNA MER1_type 2 127 -51 310 288 209 7 chr2 74405893 74405976 -176281878 - MIR SINE MIR -34 228 163 7741 62 0 62 chr2 74405976 74407050 -176280804 - LTR13 LTR ERVK 0 1007 1 310 288 209 7 chr2 74407050 74407105 -176280749 - MIR SINE MIR -99 163 62 519 268 7 7 chr2 74407108 74407246 -176280608 + L1ME LINE L1 5530 5667 -454 27 0 0 0 chr2 74407755 74407782 -176280072 + GC_rich Low_complexity Low_complexity 1 27 0 2424 92 3 0 chr2 74409215 74409520 -176278334 + AluSp SINE Alu 1 306 -7 303 189 33 56 chr2 74409520 74409616 -176278238 + MIR SINE MIR 31 125 -83 277 182 0 0 chr2 74409620 74409664 -176278190 - MER5B DNA MER1_type -3 175 132 1121 102 57 23 chr2 74409665 74409842 -176278012 + AluSc SINE Alu 119 301 -8 2473 78 0 3 chr2 74409845 74410152 -176277702 + AluY SINE Alu 1 306 -5 495 244 9 0 chr2 74410154 74410269 -176277585 - MER5B DNA MER1_type -62 116 1 298 275 55 11 chr2 74410269 74410331 -176277523 + MIR SINE MIR 115 180 -82 907 256 129 46 chr2 74410363 74410758 -176277096 - L2 LINE L2 -3 3310 2883 325 348 25 8 chr2 74410928 74411046 -176276808 - MIR3 SINE MIR -46 162 43 401 313 227 15 chr2 74412246 74412572 -176275282 - L2 LINE L2 -23 3249 2855 731 268 110 28 chr2 74415118 74415372 -176272482 - L2 LINE L2 0 3272 2998 694 289 268 30 chr2 74415445 74416317 -176271537 - L2 LINE L2 -434 2880 1801 198 103 0 0 chr2 74417935 74417964 -176269890 + (TG)n Simple_repeat Simple_repeat 1 29 0 258 291 103 8 chr2 74420380 74420497 -176267357 - MIR SINE MIR -57 151 24 1820 102 160 0 chr2 74421328 74421584 -176266270 - AluSg SINE Alu -13 297 1 319 182 71 48 chr2 74421588 74421630 -176266224 + MER112 DNA MER1_type 8 48 -212 2455 92 3 0 chr2 74421630 74421936 -176265918 + AluSp SINE Alu 2 308 -5 319 182 71 48 chr2 74421936 74422086 -176265768 + MER112 DNA MER1_type 48 253 -7 183 314 38 63 chr2 74422616 74422775 -176265079 - L2 LINE L2 -2842 472 318 361 296 169 50 chr2 74423218 74423556 -176264298 - L2 LINE L2 -1 3271 2894 22 35 0 0 chr2 74423826 74423855 -176263999 + GC_rich Low_complexity Low_complexity 1 29 0 213 39 0 0 chr2 74424007 74424033 -176263821 + (CCG)n Simple_repeat Simple_repeat 3 28 0 182 289 0 0 chr2 74424433 74424478 -176263376 - L2 LINE L2 -21 3292 3248 228 276 118 0 chr2 74424514 74424590 -176263264 - MIR SINE MIR -64 144 60 2760 151 62 27 chr2 74424900 74425451 -176262403 + L1MB3 LINE L1 5601 6170 -13 1854 63 0 0 chr2 74425482 74425704 -176262150 + AluY SINE Alu 80 301 -10 1640 154 88 0 chr2 74425716 74425988 -176261866 + AluJo SINE Alu 1 296 -16 2558 48 0 19 chr2 74425996 74426312 -176261542 + AluY SINE Alu 2 311 0 589 226 16 38 chr2 74426314 74426500 -176261354 - Charlie4a DNA MER1_type -106 402 221 1634 187 19 0 chr2 74426659 74426926 -176260928 + AluJo SINE Alu 6 277 -35 2216 128 3 0 chr2 74426940 74427238 -176260616 - AluSx SINE Alu -13 299 1 388 188 125 0 chr2 74427250 74427330 -176260524 + L1MC/D LINE L1 5682 5771 -2037 1589 180 0 38 chr2 74427444 74427733 -176260121 - AluJo SINE Alu -32 280 3 276 53 0 0 chr2 74428170 74428208 -176259646 + (TC)n Simple_repeat Simple_repeat 1 38 0 1881 145 53 0 chr2 74428209 74428491 -176259363 - AluSx SINE Alu -15 297 1 205 244 56 67 chr2 74428534 74428624 -176259230 - MIR3 SINE MIR -22 186 98 1787 180 3 3 chr2 74428999 74429288 -176258566 + AluJo SINE Alu 1 289 -23 2378 79 3 16 chr2 74429297 74429614 -176258240 + AluSp SINE Alu 1 313 0 874 272 34 7 chr2 74429785 74430031 -176257823 - MIR SINE MIR 0 262 15 270 136 0 0 chr2 74431423 74431467 -176256387 + (CA)n Simple_repeat Simple_repeat 1 44 0 263 89 0 36 chr2 74431855 74431911 -176255943 + Alu SINE Alu 249 302 0 501 261 36 61 chr2 74432110 74432208 -176255646 - MIR SINE MIR -3 259 164 1794 163 7 11 chr2 74432208 74432525 -176255329 - AluJb SINE Alu 0 316 1 501 261 36 61 chr2 74432525 74432590 -176255264 - MIR SINE MIR -98 164 99 341 225 0 0 chr2 74432629 74432700 -176255154 + MER81 DNA DNA 44 114 0 192 125 0 0 chr2 74432784 74432816 -176255038 + (CA)n Simple_repeat Simple_repeat 1 32 0 185 280 20 0 chr2 74433472 74433522 -176254332 + L2 LINE L2 3194 3244 -28 200 276 35 0 chr2 74434087 74434145 -176253709 + MER5B DNA MER1_type 75 134 -44 321 203 31 0 chr2 74434465 74434529 -176253325 - MIR SINE MIR -98 164 99 343 225 0 0 chr2 74434568 74434639 -176253215 + MER81 DNA DNA 44 114 0 183 184 0 0 chr2 74434723 74434761 -176253093 + (CA)n Simple_repeat Simple_repeat 1 38 0 194 250 62 0 chr2 74435516 74435564 -176252290 + L3 LINE CR1 1513 1563 -14 387 56 0 0 chr2 74435790 74435844 -176252010 + (TG)n Simple_repeat Simple_repeat 2 55 0 890 243 194 9 chr2 74437137 74437466 -176250388 + L2 LINE L2 2919 3308 -5 216 289 24 12 chr2 74437471 74437554 -176250300 + (CACG)n Simple_repeat Simple_repeat 4 87 0 659 246 5 10 chr2 74438113 74438316 -176249538 + L1MA4 LINE L1 5946 6147 -153 2181 111 7 3 chr2 74438378 74438685 -176249169 - AluSp SINE Alu -5 308 1 3024 227 25 44 chr2 74438730 74439722 -176248132 + L1MB3 LINE L1 4818 5828 -355 1968 114 4 4 chr2 74439722 74439994 -176247860 + AluSx SINE Alu 1 272 -40 3024 227 25 44 chr2 74439994 74440007 -176247847 + L1MB3 LINE L1 5828 5840 -343 263 70 0 23 chr2 74440007 74440050 -176247804 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 3024 227 25 44 chr2 74440050 74440140 -176247714 + L1MB3 LINE L1 5840 5930 -253 2251 131 0 0 chr2 74440140 74440452 -176247402 + AluSx SINE Alu 1 312 0 3024 227 25 44 chr2 74440452 74440716 -176247138 + L1MB3 LINE L1 5930 6153 -30 1197 190 278 5 chr2 74441457 74442117 -176245737 - SATR1 Satellite Satellite -1 840 1 549 196 167 136 chr2 74442166 74442519 -176245335 - SATR1 Satellite Satellite -95 375 12 713 242 162 82 chr2 74442567 74442993 -176244861 - SATR1 Satellite Satellite -4 466 7 1011 218 289 3 chr2 74443044 74443397 -176244457 - SATR1 Satellite Satellite -15 455 2 782 224 308 11 chr2 74443421 74444279 -176243575 - SATR1 Satellite Satellite -3 1112 1 1082 212 287 9 chr2 74444304 74446056 -176241798 - SATR1 Satellite Satellite -2 2238 1 961 202 226 46 chr2 74446072 74446787 -176241067 - SATR1 Satellite Satellite -11 843 1 893 220 244 29 chr2 74446810 74447187 -176240667 - SATR1 Satellite Satellite -1 469 12 716 249 306 4 chr2 74447226 74448174 -176239680 - SATR1 Satellite Satellite -1 1234 1 1353 223 113 36 chr2 74448386 74449231 -176238623 - SATR1 Satellite Satellite 0 909 1 26 88 0 0 chr2 74449280 74449348 -176238506 + AT_rich Low_complexity Low_complexity 1 68 0 277 221 14 43 chr2 74449413 74449553 -176238301 + (TTA)n Simple_repeat Simple_repeat 1 136 0 28286 91 11 14 chr2 74449581 74453666 -176234188 + HERVE LTR ERV1 1108 5178 -2635 2171 172 138 23 chr2 74453669 74455972 -176231882 - SATR1 Satellite Satellite -1 2567 1 1183 201 211 52 chr2 74455985 74456866 -176230988 - SATR1 Satellite Satellite -1 1021 1 932 214 278 3 chr2 74456894 74457225 -176230629 - SATR1 Satellite Satellite -1 469 48 1468 118 27 14 chr2 74457227 74457448 -176230406 - AluSq SINE Alu -89 224 1 735 242 40 0 chr2 74459349 74459547 -176228307 + MER6B DNA MER2_type 5 210 0 209 301 51 64 chr2 74459646 74459802 -176228052 + MER5B DNA MER1_type 1 154 -24 2141 135 3 0 chr2 74459963 74460143 -176227711 - AluSp SINE Alu 0 313 130 225 24 71 0 chr2 74460143 74460185 -176227669 + T-rich Low_complexity Low_complexity 2 46 0 2141 135 3 0 chr2 74460185 74460316 -176227538 - AluSp SINE Alu -183 130 1 295 244 96 45 chr2 74460316 74460464 -176227390 - HsTC2 DNA Tc2 -109 1789 1631 1276 209 3 75 chr2 74460506 74460689 -176227165 + L1MA4 LINE L1 5771 5913 -387 1881 148 0 3 chr2 74460689 74460973 -176226881 + AluSx SINE Alu 1 283 -29 1276 209 3 75 chr2 74460973 74461177 -176226677 + L1MA4 LINE L1 5913 6130 -170 2170 117 3 3 chr2 74461257 74461565 -176226289 - AluSp SINE Alu -5 308 1 2933 234 26 40 chr2 74461610 74462602 -176225252 + L1MB3 LINE L1 4818 5822 -361 1991 115 7 4 chr2 74462602 74462880 -176224974 + AluSx SINE Alu 1 279 -33 305 24 24 0 chr2 74462886 74462928 -176224926 + (CAAAA)n Simple_repeat Simple_repeat 5 47 0 2933 234 26 40 chr2 74462928 74463029 -176224825 + L1MB3 LINE L1 5827 5928 -255 2041 151 0 0 chr2 74463029 74463333 -176224521 + AluSx SINE Alu 1 304 -8 2933 234 26 40 chr2 74463333 74463585 -176224269 + L1MB3 LINE L1 5928 6153 -30 310 379 37 5 chr2 74464422 74464636 -176223218 - MIR SINE MIR -10 252 32 2216 116 0 6 chr2 74465029 74465340 -176222514 + AluSg SINE Alu 1 309 -1 198 346 59 0 chr2 74465401 74465502 -176222352 + MIR SINE MIR 30 136 -72 211 339 45 18 chr2 74465740 74465852 -176222002 + L2 LINE L2 3158 3272 0 2102 116 0 10 chr2 74465917 74466219 -176221635 - AluSc SINE Alu -10 299 1 926 218 231 30 chr2 74467915 74469212 -176218642 - SATR1 Satellite Satellite -144 1557 1 811 238 291 5 chr2 74469232 74469890 -176217964 - SATR1 Satellite Satellite -94 846 1 470 257 328 3 chr2 74469921 74470256 -176217598 - SATR1 Satellite Satellite -3 467 24 1691 210 100 34 chr2 74470486 74471596 -176216258 - SATR1 Satellite Satellite -20 1182 1 360 236 13 32 chr2 74471718 74471875 -176215979 + (TTA)n Simple_repeat Simple_repeat 1 154 0 223 225 0 28 chr2 74471902 74471973 -176215881 + (TTA)n Simple_repeat Simple_repeat 1 69 0 2144 195 107 16 chr2 74471982 74474235 -176213619 - SATR1 Satellite Satellite -1 2456 1 23 0 0 0 chr2 74474243 74474266 -176213588 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 74474285 74474311 -176213543 + AT_rich Low_complexity Low_complexity 1 26 0 377 236 17 23 chr2 74474353 74474527 -176213327 + (TTA)n Simple_repeat Simple_repeat 2 174 0 1622 195 104 13 chr2 74474529 74475163 -176212691 - SATR1 Satellite Satellite 0 691 1 230 213 32 75 chr2 74475167 74475261 -176212593 + LTR2 LTR ERV1 1 90 -359 828 162 6 45 chr2 74475339 74475518 -176212336 + LTR2 LTR ERV1 266 437 -12 497 91 0 39 chr2 74475535 74475612 -176212242 - tRNA-Glu-GAG tRNA tRNA 0 75 2 14571 101 15 8 chr2 74475613 74477746 -176210108 + HERVE LTR ERV1 647 2795 -5018 14221 85 8 24 chr2 74477751 74479797 -176208057 + HERVE LTR ERV1 3164 5178 -2635 2154 167 115 11 chr2 74479800 74481105 -176206749 - SATR1 Satellite Satellite 0 1440 1 2139 164 116 8 chr2 74481144 74482070 -176205784 - SATR1 Satellite Satellite -170 1025 1 660 243 172 55 chr2 74482112 74482437 -176205417 - SATR1 Satellite Satellite -94 376 14 955 193 270 21 chr2 74482478 74482984 -176204870 - SATR1 Satellite Satellite -2 632 1 1146 179 247 29 chr2 74483007 74483387 -176204467 - SATR1 Satellite Satellite -1 469 7 1455 116 27 27 chr2 74483484 74483708 -176204146 - AluSq SINE Alu -89 224 1 721 223 67 0 chr2 74485608 74485801 -176202053 + MER6B DNA MER2_type 5 210 0 328 263 39 77 chr2 74485904 74486060 -176201794 - MER5B DNA MER1_type -4 174 25 2037 106 9 100 chr2 74486204 74486545 -176201309 - AluSp SINE Alu -3 310 1 366 266 70 0 chr2 74486550 74486693 -176201161 - HsTC2 DNA Tc2 -118 1780 1628 712 203 16 11 chr2 74486731 74486913 -176200941 + L1MA4 LINE L1 5767 5949 -351 1807 152 0 4 chr2 74486914 74487190 -176200664 + AluSx SINE Alu 1 275 -37 1515 166 37 0 chr2 74489700 74489941 -176197913 + AluJo SINE Alu 17 266 -46 1588 152 95 129 chr2 74490477 74490649 -176197205 + L1MD2 LINE L1 5782 5958 -401 642 136 64 9 chr2 74490649 74490759 -176197095 - FLAM_C SINE Alu -17 116 1 1588 152 95 129 chr2 74490759 74490996 -176196858 + L1MD2 LINE L1 5958 6167 -192 2195 107 10 3 chr2 74490996 74491296 -176196558 + AluSq SINE Alu 1 302 -11 1588 152 95 129 chr2 74491296 74491483 -176196371 + L1MD2 LINE L1 6167 6359 0 1715 186 3 7 chr2 74491492 74491782 -176196072 + AluJo SINE Alu 3 291 -21 768 223 24 34 chr2 74492895 74493101 -176194753 + MER63A DNA MER1_type 1 204 -6 205 245 18 123 chr2 74494636 74494730 -176193124 + MIR SINE MIR 71 143 -119 2252 116 0 0 chr2 74494730 74495024 -176192830 + AluSx SINE Alu 1 294 -18 205 245 18 123 chr2 74495024 74495092 -176192762 + MIR SINE MIR 143 216 -46 2243 88 0 7 chr2 74495105 74495416 -176192438 + AluY SINE Alu 1 309 0 2401 109 3 0 chr2 74495445 74495757 -176192097 - AluSq SINE Alu 0 313 1 1037 218 99 0 chr2 74495848 74496142 -176191712 - MER33 DNA MER1_type 0 324 2 350 283 88 18 chr2 74496214 74496327 -176191527 - MIR SINE MIR -72 190 70 411 284 64 14 chr2 74498443 74498584 -176189270 + MIR3 SINE MIR 54 201 -7 911 302 160 25 chr2 74498631 74499144 -176188710 - L3 LINE CR1 -564 1013 432 277 309 61 101 chr2 74499196 74499542 -176188312 - L2 LINE L2 -20 3252 2921 207 233 0 0 chr2 74500145 74500188 -176187666 + L2 LINE L2 2183 2225 -1089 990 207 55 30 chr2 74500201 74500438 -176187416 + MIR SINE MIR 20 262 0 302 238 201 37 chr2 74501321 74501510 -176186344 + MIR SINE MIR 11 230 -32 180 0 0 0 chr2 74503417 74503437 -176184417 + (CTGGGG)n Simple_repeat Simple_repeat 2 21 0 226 268 155 0 chr2 74503688 74503759 -176184095 + MIR SINE MIR 163 244 -18 2358 93 0 3 chr2 74503806 74504106 -176183748 + AluSx SINE Alu 1 299 -13 693 178 110 0 chr2 74504186 74504332 -176183522 + MER103 DNA DNA 3 164 -2 303 111 0 0 chr2 74504353 74504398 -176183456 + FLAM_A SINE Alu 29 73 -59 1949 118 46 39 chr2 74506130 74506435 -176181419 - AluSx SINE Alu -5 307 1 199 339 71 9 chr2 74508388 74508500 -176179354 - L2 LINE L2 -21 3251 3133 2509 69 0 3 chr2 74508673 74508979 -176178875 + AluY SINE Alu 1 305 -6 189 306 16 16 chr2 74509001 74509063 -176178791 - MER5A DNA MER1_type -68 121 60 1664 180 24 17 chr2 74509856 74510151 -176177703 - AluJo SINE Alu -15 297 1 2161 105 0 11 chr2 74510185 74510577 -176177277 - AluSx SINE Alu 0 389 1 194 323 57 73 chr2 74510803 74510877 -176176977 - L2 LINE L2 -5 3308 3234 2381 89 0 0 chr2 74510877 74511170 -176176684 + AluSc SINE Alu 1 293 -16 1757 129 103 4 chr2 74511178 74511450 -176176404 + AluSx SINE Alu 1 299 -13 194 323 57 73 chr2 74511450 74511490 -176176364 - L2 LINE L2 -86 3227 3187 358 257 69 10 chr2 74511750 74511851 -176176003 + L2 LINE L2 3165 3271 -1 227 280 0 0 chr2 74511989 74512039 -176175815 - MIR SINE MIR -2 260 211 1281 247 27 20 chr2 74513166 74513285 -176174569 + L1MB7 LINE L1 5771 5888 -296 2007 127 28 0 chr2 74513285 74513576 -176174278 + AluSx SINE Alu 1 299 -13 1281 247 27 20 chr2 74513576 74513857 -176173997 + L1MB7 LINE L1 5888 6174 -10 187 54 54 0 chr2 74513860 74513897 -176173957 + T-rich Low_complexity Low_complexity 2 40 0 2407 77 115 0 chr2 74513900 74514238 -176173616 + MER51B LTR ERV1 1 377 0 27 0 0 0 chr2 74514428 74514455 -176173399 + AT_rich Low_complexity Low_complexity 1 27 0 3565 53 5 7 chr2 74515534 74515983 -176171871 - LTR7 LTR ERV1 -2 448 1 2400 80 53 13 chr2 74515983 74516360 -176171494 - HERVH LTR ERV1 0 7713 7322 * 18849 92 17 68 chr2 74516358 74519719 -176168135 - HERVH LTR ERV1 -1894 5819 1 3495 67 0 7 chr2 74519721 74520172 -176167682 - LTR7 LTR ERV1 -2 448 1 1024 180 0 83 chr2 74520202 74520430 -176167424 + AluJo SINE Alu 3 211 -101 823 210 122 59 chr2 74520435 74520673 -176167181 + MLT1A1 LTR MaLR 109 361 -4 7793 124 137 26 chr2 74520700 74522226 -176165628 - pTR5 LTR ERV1 0 2438 743 831 236 70 0 chr2 74522226 74522425 -176165429 - MER110 LTR ERV1 -233 258 46 1930 140 4 0 chr2 74522515 74522793 -176165061 + AluSg SINE Alu 1 279 -31 910 207 77 134 chr2 74522806 74523256 -176164598 + HAL1 LINE L1 1911 2316 -191 2044 129 0 41 chr2 74523256 74523574 -176164280 - AluSg SINE Alu -5 305 1 910 207 77 134 chr2 74523574 74523750 -176164104 + HAL1 LINE L1 2316 2501 -6 560 151 0 0 chr2 74523820 74523906 -176163948 + MLT1A1 LTR MaLR 280 365 0 249 224 71 47 chr2 74523906 74523980 -176163874 - MER110 LTR ERV1 -215 276 201 2196 101 17 3 chr2 74524581 74524879 -176162975 + AluSx SINE Alu 1 302 -10 263 294 46 20 chr2 74525342 74525495 -176162359 - L1 LINE L1 -2621 3525 3369 467 159 14 0 chr2 74525523 74525623 -176162231 - AluJb SINE Alu 0 313 213 1635 165 0 0 chr2 74525624 74525872 -176161982 - AluJb SINE Alu -64 248 1 519 266 0 0 chr2 74526123 74526251 -176161603 + L1M4 LINE L1 2968 3095 -3051 2048 144 10 0 chr2 74526252 74526558 -176161296 + AluSx SINE Alu 1 309 -3 309 109 0 0 chr2 74526560 74526606 -176161248 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 682 204 19 0 chr2 74526606 74526763 -176161091 + L1M4 LINE L1 3080 3239 -2907 834 264 87 39 chr2 74526825 74526877 -176160977 - MLT1E LTR MaLR -137 456 408 2124 106 3 50 chr2 74526877 74527199 -176160655 - AluSx SINE Alu -5 307 1 834 264 87 39 chr2 74527199 74527479 -176160375 - MLT1E LTR MaLR -185 408 108 519 218 21 7 chr2 74527482 74527624 -176160230 + Charlie2 DNA MER1_type 2465 2608 -254 1295 114 0 6 chr2 74527628 74527836 -176160018 - AluSg/x SINE Alu 0 313 107 890 219 19 23 chr2 74527842 74528098 -176159756 + Charlie2 DNA MER1_type 2608 2862 0 882 110 16 0 chr2 74528590 74528717 -176159137 - AluSg/x SINE Alu -3 309 181 1219 78 0 7 chr2 74530421 74530575 -176157279 - AluY SINE Alu -155 156 4 5006 171 45 40 chr2 74530827 74531282 -176156572 + L1MCa LINE L1 30 481 -5945 2222 112 0 0 chr2 74531282 74531578 -176156276 - AluSg SINE Alu -13 297 2 5006 171 45 40 chr2 74531578 74532133 -176155721 + L1MCa LINE L1 481 1048 -5378 2528 158 44 5 chr2 74532133 74532543 -176155311 + MSTB LTR MaLR 1 426 0 5006 171 45 40 chr2 74532543 74532592 -176155262 + L1MCa LINE L1 1048 1095 -5331 5236 160 101 8 chr2 74532595 74533528 -176154326 + LTR28 LTR ERV1 1 1020 0 485 149 0 0 chr2 74533531 74533605 -176154249 + L1MCa LINE L1 1099 1172 -5254 * 1773 89 27 55 chr2 74533597 74533735 -176154119 + L1M2 LINE L1 5335 5475 -816 1902 123 35 50 chr2 74533735 74534052 -176153802 + AluSx SINE Alu 1 312 0 1918 156 3 3 chr2 74534054 74534349 -176153505 + AluSx SINE Alu 1 295 -17 1773 89 27 55 chr2 74534349 74534500 -176153354 + L1M2 LINE L1 5476 5619 -672 2045 154 57 77 chr2 74534500 74534556 -176153298 - MSTB1 LTR MaLR 0 432 376 661 181 31 16 chr2 74534556 74534683 -176153171 - FLAM_A SINE Alu -4 129 1 2045 154 57 77 chr2 74534683 74535067 -176152787 - MSTB1 LTR MaLR -56 376 1 2573 134 48 39 chr2 74535067 74535245 -176152609 + L1MA7 LINE L1 5615 5790 -381 279 0 0 0 chr2 74535245 74535276 -176152578 + (CA)n Simple_repeat Simple_repeat 2 32 0 2573 134 48 39 chr2 74535276 74535587 -176152267 + L1MA7 LINE L1 5790 6119 -52 23 0 0 0 chr2 74535598 74535621 -176152233 + AT_rich Low_complexity Low_complexity 1 23 0 2028 132 0 3 chr2 74535724 74536013 -176151841 - AluSx SINE Alu -24 288 1 2027 154 0 0 chr2 74536167 74536465 -176151389 - AluJb SINE Alu -14 298 1 1732 225 105 32 chr2 74537035 74538130 -176149724 - L1MDa LINE L1 -3183 3357 2138 208 147 0 0 chr2 74538970 74539004 -176148850 + (TA)n Simple_repeat Simple_repeat 2 35 0 358 356 91 26 chr2 74539349 74539613 -176148241 - L3b LINE CR1 -9 1574 1294 227 298 99 25 chr2 74539637 74539758 -176148096 + MIR SINE MIR 126 255 -7 2159 241 86 9 chr2 74540589 74541170 -176146684 - L1MDa LINE L1 -5731 990 365 538 287 22 52 chr2 74541228 74541315 -176146539 - L1M4c LINE L1 -4883 1501 1413 2258 97 0 3 chr2 74541315 74541605 -176146249 - AluSc SINE Alu -17 292 4 2360 99 0 3 chr2 74541607 74541910 -176145944 - AluSx SINE Alu -10 302 1 538 287 22 52 chr2 74541910 74542143 -176145711 - L1M4c LINE L1 -4972 1412 1188 516 191 29 9 chr2 74542147 74542252 -176145602 + MLT1C LTR MaLR 361 467 0 3038 189 121 103 chr2 74542252 74543355 -176144499 + L1MC3 LINE L1 6394 7523 -262 1245 119 6 11 chr2 74543355 74543532 -176144322 + L1PA10 LINE L1 5993 6168 0 3038 189 121 103 chr2 74543532 74543696 -176144158 + L1MC3 LINE L1 7523 7683 -102 233 249 145 84 chr2 74543717 74544075 -176143779 + L1MC5 LINE L1 7527 7906 -55 1730 164 25 4 chr2 74544282 74544563 -176143291 + AluJo SINE Alu 2 288 -24 1856 77 24 12 chr2 74544898 74545145 -176142709 + L1PA7 LINE L1 5901 6150 -4 2279 63 31 7 chr2 74545259 74545546 -176142308 - AluY SINE Alu -17 294 1 188 67 33 0 chr2 74545578 74545608 -176142246 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2238 83 31 0 chr2 74545722 74546012 -176141842 - AluSx SINE Alu -13 299 1 214 267 21 0 chr2 74546024 74546100 -176141754 + MIR SINE MIR 89 143 -65 1869 145 39 45 chr2 74547613 74547971 -176139883 - MLT1A1 LTR MaLR 0 365 10 1582 167 141 3 chr2 74548331 74548637 -176139217 - MER7A DNA MER2_type 0 346 1 265 212 61 15 chr2 74548808 74548874 -176138980 + L2 LINE L2 3157 3225 -47 1686 177 10 7 chr2 74548945 74549239 -176138615 + AluJo SINE Alu 1 295 -17 2140 119 14 0 chr2 74549912 74550205 -176137649 - AluSx SINE Alu -13 299 3 699 229 82 53 chr2 74550250 74550555 -176137299 + MLT1J LTR MaLR 20 293 -153 566 279 119 22 chr2 74551080 74551306 -176136548 + MIR SINE MIR 7 254 -8 1741 154 0 32 chr2 74551306 74551591 -176136263 - AluJb SINE Alu -19 293 18 2368 97 57 26 chr2 74551591 74551941 -176135913 - THE1B LTR MaLR -2 362 2 326 342 85 33 chr2 74551990 74552320 -176135534 + L2 LINE L2 2926 3272 0 2352 100 3 6 chr2 74552383 74552694 -176135160 + AluSx SINE Alu 1 310 -2 1762 90 3 107 chr2 74554183 74554341 -176133513 - AluSq SINE Alu -43 270 97 288 111 0 0 chr2 74554341 74554386 -176133468 + (TA)n Simple_repeat Simple_repeat 1 45 0 2158 100 7 0 chr2 74554386 74554676 -176133178 - AluSx SINE Alu -16 296 5 1762 90 3 107 chr2 74554676 74554806 -176133048 - AluSq SINE Alu -214 99 11 181 299 124 0 chr2 74554934 74555031 -176132823 - MIR SINE MIR 0 262 154 1192 159 10 15 chr2 74555128 74555323 -176132531 - AluJb SINE Alu -118 194 1 313 185 59 101 chr2 74555325 74555400 -176132454 + L1MB5 LINE L1 6048 6117 -68 2261 114 0 0 chr2 74555400 74555699 -176132155 - AluSg SINE Alu -11 299 1 313 185 59 101 chr2 74555699 74555766 -176132088 + L1MB5 LINE L1 6117 6185 0 536 152 45 18 chr2 74555944 74556056 -176131798 - L1MA9 LINE L1 0 6312 6198 480 179 38 8 chr2 74556668 74556795 -176131059 - L1MB7 LINE L1 0 6178 6053 2254 92 7 0 chr2 74556804 74557099 -176130755 - AluSx SINE Alu -15 297 1 1203 150 52 34 chr2 74557471 74557704 -176130150 + L1M3 LINE L1 5586 5822 -361 1500 78 0 0 chr2 74557704 74557893 -176129961 - AluSp SINE Alu -14 299 110 2158 82 18 4 chr2 74557893 74558173 -176129681 + AluSx SINE Alu 14 297 -15 665 293 199 18 chr2 74560649 74560675 -176127179 + L2 LINE L2 2353 2373 -940 1632 178 45 89 chr2 74560675 74561146 -176126708 - LTR7 LTR ERV1 0 450 1 665 293 199 18 chr2 74561146 74561730 -176126124 + L2 LINE L2 2373 3068 -245 1876 168 7 0 chr2 74564058 74564356 -176123498 + AluJo SINE Alu 1 300 -12 2146 108 0 3 chr2 74564438 74564733 -176123121 + AluSx SINE Alu 2 295 -17 2479 89 0 6 chr2 74564864 74565177 -176122677 - AluSq SINE Alu -1 312 2 1668 164 30 13 chr2 74565413 74565712 -176122142 + AluJo SINE Alu 1 304 -8 423 0 0 0 chr2 74566087 74566134 -176121720 + (CA)n Simple_repeat Simple_repeat 2 48 0 351 272 129 44 chr2 74566267 74566539 -176121315 + L1M4 LINE L1 3874 4168 -1978 2160 130 7 0 chr2 74566551 74566852 -176121002 + AluJb SINE Alu 2 304 -8 296 114 19 13 chr2 74567021 74567082 -176120772 + Alu SINE Alu 1 38 -270 1491 70 30 25 chr2 74567082 74567281 -176120573 + AluSg/x SINE Alu 100 299 -13 1900 130 13 30 chr2 74567926 74568227 -176119627 + AluSq SINE Alu 1 296 -17 622 324 38 3 chr2 74568240 74568527 -176119327 - L1MC4 LINE L1 -27 8015 7719 876 176 100 0 chr2 74568752 74568922 -176118932 - MER5A DNA MER1_type -2 187 1 2132 128 144 24 chr2 74569383 74569765 -176118089 - MSTC LTR MaLR 0 428 1 257 168 50 20 chr2 74570226 74570327 -176117527 + (TAA)n Simple_repeat Simple_repeat 1 104 0 2229 122 0 6 chr2 74570921 74571232 -176116622 + AluSx SINE Alu 1 309 -3 2168 95 34 3 chr2 74572308 74572604 -176115250 - AluSc SINE Alu -4 305 1 3062 198 67 25 chr2 74572631 74573318 -176114536 - L1MB5 LINE L1 0 6174 5459 457 244 137 0 chr2 74574089 74574220 -176113634 - MIR SINE MIR -7 255 107 213 282 155 0 chr2 74574483 74574554 -176113300 + MIR SINE MIR 33 114 -94 180 312 158 31 chr2 74574878 74575295 -176112559 + L2 LINE L2 2812 3281 -32 2405 109 0 6 chr2 74575497 74575810 -176112044 - AluSx SINE Alu 0 312 2 2474 85 0 0 chr2 74576566 74576872 -176110982 + AluY SINE Alu 2 307 -4 1327 206 80 46 chr2 74580114 74580463 -176107391 - MLT1A1 LTR MaLR -4 361 1 2671 185 91 7 chr2 74580468 74581029 -176106825 - MLT1A1-int LTR MaLR 0 1735 1128 1594 253 190 30 chr2 74581053 74581791 -176106063 + L2 LINE L2 1955 2810 -504 1016 192 6 0 chr2 74581826 74582008 -176105846 + MER58A DNA MER1_type 42 224 0 218 287 18 23 chr2 74582009 74582115 -176105739 + L2 LINE L2 2828 2933 -339 2246 95 0 14 chr2 74582115 74582410 -176105444 - AluSc SINE Alu -18 291 1 709 214 29 6 chr2 74582430 74582603 -176105251 - L1ME2 LINE L1 -2 6162 5986 359 274 73 73 chr2 74583878 74584082 -176103772 + MLT1L LTR MaLR 5 208 -407 321 312 21 28 chr2 74584923 74585064 -176102790 - L2 LINE L2 -925 2389 2250 479 246 46 0 chr2 74586255 74586385 -176101469 - MIR3 SINE MIR -34 174 39 1570 144 117 72 chr2 74586945 74587374 -176100480 - LTR7 LTR ERV1 -2 448 1 2554 60 45 13 chr2 74587374 74587754 -176100100 - HERVH LTR ERV1 0 7713 7322 1327 115 23 9 chr2 74587752 74587969 -176099885 - HERVH LTR ERV1 -1894 5819 5600 * 4162 148 3 1 chr2 74587970 74588631 -176099223 - HERVH LTR ERV1 -2564 5149 4488 3258 119 4 6 chr2 74588633 74589136 -176098718 - HERVH LTR ERV1 -3720 3993 3492 3076 87 4 15 chr2 74589126 74589585 -176098269 - HERVH LTR ERV1 -4423 3290 2837 * 10058 28 1 178 chr2 74589593 74591212 -176096642 + SVA Other Other 1 1333 -53 7104 54 5 50 chr2 74592046 74593252 -176094602 + SVA Other Other 432 1396 0 15747 92 32 21 chr2 74593258 74595873 -176091981 - HERVH LTR ERV1 -4606 3113 437 2473 111 8 8 chr2 74595851 74596247 -176091607 - HERVH LTR ERV1 -3795 3918 3523 * 1590 140 117 72 chr2 74596265 74596694 -176091160 - LTR7 LTR ERV1 -2 448 1 369 257 270 0 chr2 74596988 74597136 -176090718 - MER5A DNA MER1_type -1 188 1 278 207 243 9 chr2 74597169 74597280 -176090574 - MIR SINE MIR -94 168 32 188 205 51 0 chr2 74597450 74597489 -176090365 - MIR SINE MIR -59 149 109 223 256 58 12 chr2 74597685 74597771 -176090083 + MIR3 SINE MIR 81 170 -38 2194 132 0 16 chr2 74598830 74599141 -176088713 + AluSx SINE Alu 1 306 -6 874 292 53 22 chr2 74599145 74599414 -176088440 + L1M4 LINE L1 4175 4467 -1679 1454 198 31 78 chr2 74599414 74599797 -176088057 + MLT1A1 LTR MaLR 1 365 0 874 292 53 22 chr2 74599797 74600016 -176087838 + L1M4 LINE L1 4467 4678 -1468 1038 230 113 7 chr2 74600075 74600094 -176087760 + LTR16C LTR ERVL 180 196 -295 2624 189 27 30 chr2 74600094 74600654 -176087200 + MER74A LTR ERVL 1 558 0 1038 230 113 7 chr2 74600654 74600908 -176086946 + LTR16C LTR ERVL 196 482 -9 2571 72 0 0 chr2 74600929 74601235 -176086619 - AluY SINE Alu -5 306 1 723 285 22 54 chr2 74601311 74601648 -176086206 + L1M4 LINE L1 4741 5087 -1059 1613 194 44 33 chr2 74601648 74602009 -176085845 - MLT1A1 LTR MaLR 0 365 1 723 285 22 54 chr2 74602009 74602045 -176085809 + L1M4 LINE L1 5087 5123 -1023 1713 179 10 7 chr2 74602045 74602157 -176085697 + AluJo SINE Alu 1 111 -201 222 37 0 0 chr2 74602157 74602184 -176085670 + (TC)n Simple_repeat Simple_repeat 2 28 0 1713 179 10 7 chr2 74602184 74602197 -176085657 + AluJo SINE Alu 111 122 -190 330 87 0 0 chr2 74602197 74602243 -176085611 + (TG)n Simple_repeat Simple_repeat 1 46 0 1713 179 10 7 chr2 74602243 74602407 -176085447 + AluJo SINE Alu 122 292 -20 723 285 22 54 chr2 74602407 74602492 -176085362 + L1M4 LINE L1 5123 5185 -961 563 252 15 79 chr2 74602650 74602706 -176085148 - L1MC4a LINE L1 -1879 5929 5871 1836 174 3 0 chr2 74602706 74602999 -176084855 - AluJo SINE Alu -18 294 1 563 252 15 79 chr2 74602999 74603208 -176084646 - L1MC4a LINE L1 -1937 5871 5681 701 171 24 0 chr2 74603500 74603623 -176084231 - MER20 DNA MER1_type -24 195 70 1935 143 0 11 chr2 74604625 74604939 -176082915 + AluJb SINE Alu 8 318 0 2194 91 4 0 chr2 74605016 74605291 -176082563 + AluSx SINE Alu 1 276 -36 198 324 0 0 chr2 74605503 74605571 -176082283 - MIR3 SINE MIR -1 207 140 300 200 0 0 chr2 74605663 74605738 -176082116 + GA-rich Low_complexity Low_complexity 2 76 0 879 204 24 52 chr2 74605841 74606091 -176081763 + MLT1A2 LTR MaLR 132 374 0 388 247 12 0 chr2 74606365 74606450 -176081404 - MER5B DNA MER1_type -69 109 24 1966 205 44 10 chr2 74606486 74606983 -176080871 + MER77 LTR ERV1 41 605 0 391 258 35 0 chr2 74607004 74607129 -176080725 - MER5A DNA MER1_type -41 139 8 320 305 74 60 chr2 74607559 74607742 -176080112 + L2 LINE L2 3041 3231 -82 186 43 0 0 chr2 74607742 74607765 -176080089 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 320 305 74 60 chr2 74607765 74607850 -176080004 + L2 LINE L2 3231 3313 0 450 250 93 8 chr2 74608100 74608271 -176079583 - MIR3 SINE MIR -60 148 10 180 176 29 0 chr2 74608279 74608313 -176079541 - L2 LINE L2 -509 2805 2771 351 289 99 0 chr2 74608891 74609012 -176078842 + MIR3 SINE MIR 58 190 -18 904 121 134 0 chr2 74609504 74609653 -176078201 - MSTA LTR MaLR 0 428 260 181 357 71 9 chr2 74610550 74610662 -176077192 - L2 LINE L2 -21 3251 3133 217 254 62 100 chr2 74610780 74610910 -176076944 - MER5A DNA MER1_type -5 184 60 21 0 0 0 chr2 74611769 74611790 -176076064 + AT_rich Low_complexity Low_complexity 1 21 0 2412 87 0 3 chr2 74611792 74612091 -176075763 + AluSg SINE Alu 1 298 -12 1912 163 10 3 chr2 74612091 74612386 -176075468 - AluJo SINE Alu -15 297 1 199 303 45 30 chr2 74612632 74612698 -176075156 - L2 LINE L2 -3 3269 3203 236 203 101 0 chr2 74612718 74612787 -176075067 + L1ME3A LINE L1 6092 6167 -3 234 200 0 0 chr2 74613482 74613522 -176074332 - MIR SINE MIR -12 250 211 1377 226 67 3 chr2 74614642 74615031 -176072823 + L1MB7 LINE L1 5771 6184 0 1868 148 0 58 chr2 74616351 74616676 -176071178 + AluJo SINE Alu 3 308 -4 2235 75 23 39 chr2 74620088 74620395 -176067459 - AluSx SINE Alu -10 302 1 1708 174 0 29 chr2 74621220 74621536 -176066318 + AluJo SINE Alu 1 307 -5 1252 119 32 40 chr2 74623303 74623565 -176064289 + Tigger1 DNA MER2_type 12 262 -2156 * 19891 165 21 15 chr2 74623554 74624656 -176063198 - L1PA14 LINE L1 -25 7574 6480 2037 87 65 4 chr2 74624656 74624933 -176062921 + AluY SINE Alu 1 294 -17 19891 165 21 15 chr2 74624933 74625543 -176062311 - L1PA14 LINE L1 -1119 6480 5875 360 0 0 0 chr2 74625543 74625583 -176062271 + (TG)n Simple_repeat Simple_repeat 1 40 0 19891 165 21 15 chr2 74625583 74626736 -176061118 - L1PA14 LINE L1 -1724 5875 4730 2125 114 7 0 chr2 74626736 74627026 -176060828 - AluSx SINE Alu -20 292 1 19891 165 21 15 chr2 74627026 74628685 -176059169 - L1PA14 LINE L1 -2869 4730 3082 2458 118 19 45 chr2 74628685 74629059 -176058795 - THE1B LTR MaLR 0 364 1 19891 165 21 15 chr2 74629059 74629219 -176058635 - L1PA14 LINE L1 -4517 3082 2924 2146 102 7 20 chr2 74629219 74629376 -176058478 - AluSq SINE Alu -23 290 137 2748 23 0 0 chr2 74629376 74629675 -176058179 - AluY SINE Alu -12 299 1 2146 102 7 20 chr2 74629675 74629811 -176058043 - AluSq SINE Alu -176 137 1 19891 165 21 15 chr2 74629811 74630057 -176057797 - L1PA14 LINE L1 -4675 2924 2603 600 108 0 32 chr2 74630057 74630150 -176057704 + Tigger1 DNA MER2_type 1863 1952 -466 278 243 42 83 chr2 74630301 74630445 -176057409 - L1ME4a LINE L1 -3 6118 5981 1290 59 0 0 chr2 74630660 74630813 -176057041 - AluY SINE Alu -14 297 145 737 213 0 0 chr2 74630836 74630958 -176056896 + FLAM_A SINE Alu 1 122 -11 1961 164 0 0 chr2 74631561 74631873 -176055981 + AluSx SINE Alu 1 312 0 372 88 0 0 chr2 74632089 74632146 -176055708 + (TG)n Simple_repeat Simple_repeat 2 58 0 2160 119 10 0 chr2 74632472 74632766 -176055088 - AluSx SINE Alu -15 297 1 378 286 133 14 chr2 74634441 74634799 -176053055 - L1ME4a LINE L1 -452 5669 5265 50 59 0 0 chr2 74634801 74634886 -176052968 + AT_rich Low_complexity Low_complexity 1 85 0 221 186 0 23 chr2 74636116 74636159 -176051695 + GA-rich Low_complexity Low_complexity 2 43 0 241 274 80 44 chr2 74636830 74636943 -176050911 + HAL1 LINE L1 1381 1497 -1010 1045 204 57 13 chr2 74636991 74637221 -176050633 + MLT1F1 LTR MaLR 328 567 0 1739 294 91 67 chr2 74638089 74639227 -176048627 - L2 LINE L2 0 3272 2105 2102 117 3 23 chr2 74639227 74639526 -176048328 + AluSx SINE Alu 1 293 -19 1739 294 91 67 chr2 74639526 74639622 -176048232 - L2 LINE L2 -1167 2105 2013 1638 185 152 51 chr2 74639665 74640113 -176047741 + MLT1D LTR MaLR 13 505 0 729 280 105 24 chr2 74640136 74640507 -176047347 - L2 LINE L2 -1345 1969 1569 2300 91 0 7 chr2 74640914 74641210 -176046644 - AluY SINE Alu -17 294 1 2186 94 3 39 chr2 74642050 74642357 -176045497 + AluSq SINE Alu 1 296 -17 234 301 142 9 chr2 74642397 74642510 -176045344 - MER5A DNA MER1_type -1 188 61 21 0 0 0 chr2 74643193 74643214 -176044640 + AT_rich Low_complexity Low_complexity 1 21 0 892 135 32 0 chr2 74643713 74643839 -176044015 - AluJb SINE Alu -182 130 1 1775 156 10 7 chr2 74643841 74644136 -176043718 - AluJo SINE Alu -16 296 1 233 221 52 52 chr2 74644977 74645054 -176042800 - MIR SINE MIR -43 219 143 721 159 18 9 chr2 74645103 74645216 -176042638 - FLAM_C SINE Alu -19 124 11 277 306 35 12 chr2 74645233 74645318 -176042536 - MIR SINE MIR -163 99 13 1063 232 76 20 chr2 74645610 74645912 -176041942 + MER46C DNA MER2_type 2 320 -18 533 123 0 0 chr2 74646328 74646401 -176041453 + AluS SINE Alu 228 300 -12 224 304 17 61 chr2 74646428 74646543 -176041311 - MER5B DNA MER1_type -66 112 3 23 54 0 0 chr2 74646878 74646915 -176040939 + AT_rich Low_complexity Low_complexity 1 37 0 1043 129 7 7 chr2 74647661 74647816 -176040038 + MER5A DNA MER1_type 2 156 -33 2132 91 7 30 chr2 74648232 74648528 -176039326 - AluSx SINE Alu -23 289 1 1494 190 15 11 chr2 74648871 74649145 -176038709 + AluJo SINE Alu 1 275 -37 27 29 0 0 chr2 74649393 74649427 -176038427 + AT_rich Low_complexity Low_complexity 1 34 0 458 243 168 53 chr2 74649427 74649785 -176038069 + L1ME LINE L1 5305 5701 -461 242 224 13 26 chr2 74649810 74649886 -176037968 + L1ME LINE L1 5798 5872 -249 2530 61 0 46 chr2 74649989 74650315 -176037539 - AluY SINE Alu 0 311 1 774 232 89 62 chr2 74650864 74651222 -176036632 - L1MC4a LINE L1 -1750 6058 5691 761 114 68 61 chr2 74651742 74651874 -176035980 - AluJo SINE Alu -178 134 2 340 287 29 37 chr2 74652383 74652519 -176035335 + L2 LINE L2 2926 3060 -212 274 305 0 0 chr2 74652560 74652619 -176035235 - L2 LINE L2 -92 3180 3122 958 186 123 16 chr2 74652839 74653091 -176034763 + LTR12 LTR ERV1 1 279 -435 327 198 42 31 chr2 74653092 74653188 -176034666 + LTR30 LTR ERV1 547 643 -79 688 129 0 0 chr2 74653189 74653290 -176034564 + LTR12 LTR ERV1 614 714 0 311 262 37 28 chr2 74653781 74653888 -176033966 - MIR SINE MIR -119 143 36 192 256 0 0 chr2 74654080 74654123 -176033731 + L2 LINE L2 2237 2279 -1035 220 311 14 95 chr2 74654132 74654216 -176033638 + L2 LINE L2 3137 3226 -46 2007 145 7 0 chr2 74654216 74654520 -176033334 + AluSq SINE Alu 1 306 -7 2166 115 3 7 chr2 74654527 74654822 -176033032 - AluSg1 SINE Alu -15 294 1 220 311 14 95 chr2 74654822 74654877 -176032977 + L2 LINE L2 3232 3272 0 572 271 31 0 chr2 74655002 74655131 -176032723 - MER82 DNA MER2_type 0 653 521 390 296 67 28 chr2 74655220 74655399 -176032455 + MIR SINE MIR 2 187 -75 493 242 0 0 chr2 74655432 74655527 -176032327 - MER82 DNA MER2_type -557 96 2 192 317 50 0 chr2 74655816 74655876 -176031978 + L2 LINE L2 3109 3171 -101 806 160 0 32 chr2 74656125 74656136 -176031718 - FLAM_A SINE Alu -181 121 111 183 80 0 0 chr2 74656136 74656161 -176031693 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 806 160 0 32 chr2 74656161 74656274 -176031580 - FLAM_A SINE Alu -191 111 1 2252 90 0 0 chr2 74658860 74659149 -176028705 + AluSg SINE Alu 1 289 -21 2341 114 146 11 chr2 74659418 74659795 -176028059 + MSTA LTR MaLR 1 428 0 770 248 78 42 chr2 74659829 74660136 -176027718 - L2 LINE L2 -4 3309 2992 251 152 22 0 chr2 74660199 74660245 -176027609 - L1M4 LINE L1 -3656 2490 2444 186 308 33 22 chr2 74660639 74660730 -176027124 - L2 LINE L2 -228 3085 2994 294 160 13 29 chr2 74660746 74660824 -176027030 + L1MCa LINE L1 1505 1613 -4815 4523 142 64 69 chr2 74661021 74661782 -176026072 - L1MB3 LINE L1 -4 6179 5418 1674 181 14 0 chr2 74661782 74662075 -176025779 - AluJo SINE Alu -10 302 6 4523 142 64 69 chr2 74662075 74662320 -176025534 - L1MB3 LINE L1 -765 5418 5173 1178 250 57 40 chr2 74662885 74663071 -176024783 + HAL1 LINE L1 617 798 -1709 1711 198 0 16 chr2 74663071 74663379 -176024475 - AluJo SINE Alu -9 303 1 1178 250 57 40 chr2 74663379 74663648 -176024206 + HAL1 LINE L1 798 1080 -1427 590 263 88 44 chr2 74663721 74663864 -176023990 - MLT1J LTR MaLR -243 268 110 5743 142 28 62 chr2 74663864 74664973 -176022881 - MER11C LTR ERVK 0 1071 1 590 263 88 44 chr2 74664973 74665057 -176022797 - MLT1J LTR MaLR -401 110 31 338 227 10 62 chr2 74665066 74665163 -176022691 + HAL1 LINE L1 1103 1194 -1313 638 231 35 7 chr2 74665307 74665450 -176022404 - MIR SINE MIR 0 262 116 1093 198 99 65 chr2 74665500 74665805 -176022049 - LTR52 LTR ERVL -54 367 46 2157 113 0 0 chr2 74665805 74666116 -176021738 + AluSx SINE Alu 1 311 0 1093 198 99 65 chr2 74666116 74666162 -176021692 - LTR52 LTR ERVL -375 46 3 1493 181 17 7 chr2 74666198 74666490 -176021364 + HAL1 LINE L1 1420 1714 -793 1105 260 147 28 chr2 74666497 74666563 -176021291 + MER74B LTR ERVL 56 113 -509 1591 147 33 49 chr2 74666563 74666869 -176020985 + AluJb SINE Alu 1 301 -11 1105 260 147 28 chr2 74666869 74667259 -176020595 + MER74B LTR ERVL 113 566 -56 424 273 133 45 chr2 74667313 74667599 -176020255 + HAL1 LINE L1 1712 2022 -485 716 247 128 43 chr2 74667677 74667835 -176020019 - MIR SINE MIR 0 262 76 2804 169 34 20 chr2 74667835 74668331 -176019523 - MLT1D LTR MaLR 0 505 3 716 247 128 43 chr2 74668331 74668407 -176019447 - MIR SINE MIR -186 76 8 333 267 0 0 chr2 74668421 74668507 -176019347 + HAL1 LINE L1 2119 2204 -303 368 243 116 42 chr2 74668690 74668777 -176019077 + HAL1 LINE L1 2299 2378 -129 2216 105 0 10 chr2 74668777 74669082 -176018772 + AluSp SINE Alu 2 303 -10 368 243 116 42 chr2 74669082 74669183 -176018671 + HAL1 LINE L1 2378 2501 -6 934 261 65 48 chr2 74669811 74669921 -176017933 + MLT1I LTR MaLR 48 155 -254 2302 91 3 10 chr2 74669921 74670228 -176017626 - AluSq SINE Alu -8 305 1 934 261 65 48 chr2 74670228 74670473 -176017381 + MLT1I LTR MaLR 155 409 0 2200 102 28 0 chr2 74673314 74673598 -176014256 + AluSg SINE Alu 1 292 -18 241 296 101 42 chr2 74673767 74674054 -176013800 + L1MC4 LINE L1 7699 8002 -40 350 361 50 22 chr2 74675249 74675429 -176012425 - L2 LINE L2 -5 3267 3083 298 278 7 43 chr2 74675741 74675857 -176011997 + MIR SINE MIR 53 148 -60 37916 90 14 9 chr2 74676211 74676589 -176011265 - L1PA6 LINE L1 0 6154 5779 2581 71 0 0 chr2 74676589 74676898 -176010956 - AluY SINE Alu -2 309 1 37916 90 14 9 chr2 74676898 74682640 -176005214 - L1PA6 LINE L1 -375 5779 11 5498 119 19 1 chr2 74682656 74683460 -176004394 - L1PA15 LINE L1 -3 6162 5345 260 278 123 27 chr2 74683466 74683653 -176004201 - L1ME LINE L1 -298 5823 5619 710 215 65 0 chr2 74684006 74684192 -176003662 - L2 LINE L2 -972 2342 2145 * 845 255 110 81 chr2 74684191 74684532 -176003322 + L2 LINE L2 2878 3235 -78 1626 271 71 19 chr2 74684532 74684997 -176002857 - LTR16C LTR ERVL 0 491 3 845 255 110 81 chr2 74684997 74685074 -176002780 + L2 LINE L2 3235 3308 -5 466 116 0 58 chr2 74685102 74685171 -176002683 - AluS SINE Alu -247 66 2 1013 272 110 73 chr2 74685443 74685521 -176002333 + MLT1G1 LTR MaLR 1 75 -520 2339 117 0 0 chr2 74685521 74685829 -176002025 - AluSx SINE Alu -4 308 1 1013 272 110 73 chr2 74685829 74686324 -176001530 + MLT1G1 LTR MaLR 75 595 0 931 358 103 16 chr2 74686507 74686814 -176001040 - L2 LINE L2 -622 2692 2413 2479 85 3 0 chr2 74686814 74687121 -176000733 + AluSp SINE Alu 1 308 -5 931 358 103 16 chr2 74687121 74687583 -176000271 - L2 LINE L2 -901 2413 1856 699 223 51 25 chr2 74687769 74687966 -175999888 + MIR SINE MIR 2 203 -59 185 150 0 25 chr2 74687978 74688018 -175999836 + (TTA)n Simple_repeat Simple_repeat 1 39 0 2096 180 74 30 chr2 74688073 74688574 -175999280 + Charlie1b DNA MER1_type 1 523 0 1560 227 107 54 chr2 74689276 74689791 -175998063 - MLT1F1 LTR MaLR 0 567 1 368 320 24 16 chr2 74689793 74689918 -175997936 - MIR SINE MIR -120 142 17 1000 147 144 123 chr2 74690386 74690671 -175997183 - AluJo SINE Alu -11 291 1 2275 91 3 0 chr2 74691226 74691543 -175996311 + AluSp SINE Alu 6 313 0 547 128 0 0 chr2 74691614 74691692 -175996162 - AluSg/x SINE Alu -17 295 218 2484 83 0 0 chr2 74691713 74692025 -175995829 + AluSq SINE Alu 1 312 -1 224 322 11 0 chr2 74692781 74692868 -175994986 + MIR SINE MIR 53 140 -68 1971 156 0 3 chr2 74693077 74693378 -175994476 + AluJb SINE Alu 1 300 -12 1648 163 74 0 chr2 74693800 74694083 -175993771 - AluJb SINE Alu -8 304 1 2167 112 10 3 chr2 74695032 74695336 -175992518 - AluSx SINE Alu -6 306 1 1732 173 47 24 chr2 74695339 74695380 -175992474 - L1M4 LINE L1 -512 5672 5633 662 143 83 0 chr2 74695380 74695513 -175992341 - L1MB8 LINE L1 -2 6176 6033 1732 173 47 24 chr2 74695513 74695641 -175992213 - L1M4 LINE L1 -551 5633 5509 1975 195 37 18 chr2 74695641 74696021 -175991833 - MLT1B LTR MaLR 0 390 4 1732 173 47 24 chr2 74696021 74696191 -175991663 - L1M4 LINE L1 -675 5509 5324 189 0 0 0 chr2 74696193 74696214 -175991640 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 774 154 25 6 chr2 74696215 74696377 -175991477 + CT-rich Low_complexity Low_complexity 4 168 0 1392 165 71 64 chr2 74696380 74696603 -175991251 - AluSx SINE Alu -13 299 72 13440 27 7 0 chr2 74696603 74698865 -175988989 - L1PA4 LINE L1 -3 6152 3879 1392 165 71 64 chr2 74698865 74698938 -175988916 - AluSx SINE Alu -240 72 1 243 133 44 0 chr2 74699004 74699049 -175988805 + LTR66 LTR ERVL 392 438 -172 1622 160 41 4 chr2 74699234 74699503 -175988351 + AluJb SINE Alu 1 279 -33 216 0 0 0 chr2 74699506 74699530 -175988324 + (TAA)n Simple_repeat Simple_repeat 2 25 0 180 152 0 0 chr2 74699616 74699649 -175988205 + (TA)n Simple_repeat Simple_repeat 2 34 0 20591 179 43 29 chr2 74700115 74701137 -175986717 + L1PA12 LINE L1 10 1017 -6567 2436 87 0 0 chr2 74701137 74701436 -175986418 - AluSc SINE Alu -10 299 1 20591 179 43 29 chr2 74701436 74702478 -175985376 + L1PA12 LINE L1 1017 2043 -5541 2473 78 0 0 chr2 74702478 74702774 -175985080 + AluY SINE Alu 1 296 -15 20591 179 43 29 chr2 74702774 74704764 -175983090 + L1PA12 LINE L1 2043 4004 -3580 1960 145 0 3 chr2 74704764 74705092 -175982762 + AluSx SINE Alu 1 327 0 20591 179 43 29 chr2 74705092 74706142 -175981712 + L1PA12 LINE L1 4004 6269 -1315 5174 77 6 8 chr2 74706142 74706793 -175981061 + L1PA8 LINE L1 5514 6171 -1 422 105 158 0 chr2 74706935 74707011 -175980843 - AluJb SINE Alu -53 259 172 242 298 113 32 chr2 74707253 74707377 -175980477 + L2 LINE L2 3119 3252 -20 304 137 20 0 chr2 74708487 74708538 -175979316 + MER31A LTR ERV1 353 404 -81 21 0 0 0 chr2 74710049 74710070 -175977784 + AT_rich Low_complexity Low_complexity 1 21 0 24 85 0 0 chr2 74710547 74710606 -175977248 + AT_rich Low_complexity Low_complexity 1 59 0 291 312 151 13 chr2 74710606 74710904 -175976950 - L1MC4a LINE L1 -1645 6163 5825 2069 125 0 29 chr2 74710988 74711301 -175976553 + AluSx SINE Alu 1 304 -8 24 0 0 0 chr2 74711429 74711453 -175976401 + AT_rich Low_complexity Low_complexity 1 24 0 2104 253 81 85 chr2 74711453 74713072 -175974782 - HAL1 LINE L1 0 2507 895 3302 154 44 11 chr2 74713155 74713699 -175974155 - MER68 LTR ERV1 0 562 1 547 159 353 9 chr2 74713946 74714258 -175973596 + Charlie1 DNA MER1_type 80 2755 -6 1576 184 31 31 chr2 74714367 74714721 -175973133 - LTR37A LTR ERV1 -72 354 1 25 0 0 0 chr2 74714925 74714950 -175972904 + AT_rich Low_complexity Low_complexity 1 25 0 2025 81 25 18 chr2 74714950 74715234 -175972620 - L1MA1 LINE L1 -4 6298 6013 754 274 79 20 chr2 74715604 74715856 -175971998 + MLT1F LTR MaLR 7 273 -269 479 258 182 53 chr2 74715847 74715988 -175971866 + MLT1J LTR MaLR 59 180 -331 * 736 154 99 103 chr2 74715988 74716221 -175971633 - MER106A DNA MER1_type -4 232 1 479 258 182 53 chr2 74716221 74716474 -175971380 + MLT1J LTR MaLR 180 504 -7 1512 226 68 5 chr2 74716520 74716919 -175970935 + L1 LINE L1 4419 4842 -1304 1618 104 49 77 chr2 74717229 74717393 -175970461 - AluJo SINE Alu -14 298 144 2264 125 0 0 chr2 74717393 74717705 -175970149 - AluSx SINE Alu 0 312 1 1618 104 49 77 chr2 74717705 74717827 -175970027 - AluJo SINE Alu -168 144 20 186 43 0 0 chr2 74718008 74718031 -175969823 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1628 178 0 24 chr2 74718239 74718526 -175969328 + AluJb SINE Alu 1 280 -32 2917 262 102 118 chr2 74718683 74719206 -175968648 + Charlie8 DNA MER1_type 10 540 -1877 1877 156 0 10 chr2 74719206 74719507 -175968347 + AluJo SINE Alu 1 298 -14 2917 262 102 118 chr2 74719507 74719827 -175968027 + Charlie8 DNA MER1_type 540 864 -1553 766 200 15 0 chr2 74719827 74719957 -175967897 + AluJb SINE Alu 2 133 -179 2917 262 102 118 chr2 74719957 74720257 -175967597 + Charlie8 DNA MER1_type 864 1167 -1250 2173 97 21 0 chr2 74720257 74720545 -175967309 - AluSx SINE Alu -18 294 1 2917 262 102 118 chr2 74720545 74721487 -175966367 + Charlie8 DNA MER1_type 1167 2122 -295 1873 161 3 3 chr2 74721487 74721785 -175966069 - AluJb SINE Alu -14 298 1 2917 262 102 118 chr2 74721785 74721814 -175966040 + Charlie8 DNA MER1_type 2122 2150 -267 797 187 0 8 chr2 74721814 74721948 -175965906 - FLAM_C SINE Alu 0 133 1 2917 262 102 118 chr2 74721948 74722147 -175965707 + Charlie8 DNA MER1_type 2150 2417 0 895 176 5 83 chr2 74723016 74723221 -175964633 + MER5A DNA MER1_type 1 189 0 5808 172 43 23 chr2 74723633 74724491 -175963363 - L1MB4 LINE L1 0 6180 5340 2467 67 3 0 chr2 74724491 74724789 -175963065 - AluSc SINE Alu -1 308 10 5808 172 43 23 chr2 74724789 74725347 -175962507 - L1MB4 LINE L1 -840 5340 4794 2631 43 0 0 chr2 74725347 74725652 -175962202 - AluY SINE Alu -6 305 1 5808 172 43 23 chr2 74725652 74726127 -175961727 - L1MB4 LINE L1 -1386 4794 4330 222 37 0 0 chr2 74726127 74726154 -175961700 + (TG)n Simple_repeat Simple_repeat 2 28 0 5808 172 43 23 chr2 74726154 74726315 -175961539 - L1MB4 LINE L1 -1850 4330 4174 2006 152 0 0 chr2 74726315 74726611 -175961243 + AluSx SINE Alu 1 296 -16 5808 172 43 23 chr2 74726611 74726834 -175961020 - L1MB4 LINE L1 -2006 4174 3876 374 174 73 28 chr2 74726828 74726862 -175960992 + L1 LINE L1 3620 3651 -2495 * 2315 109 0 7 chr2 74726862 74727165 -175960689 - AluSx SINE Alu -11 301 1 374 174 73 28 chr2 74727165 74727239 -175960615 + L1 LINE L1 3651 3733 -2413 943 249 49 31 chr2 74727257 74727646 -175960208 + L1MC4a LINE L1 4298 4693 -1453 425 167 0 0 chr2 74727688 74727754 -175960100 + AluJ/FLAM SINE Alu 1 66 -246 22 35 0 0 chr2 74727760 74727789 -175960065 + AT_rich Low_complexity Low_complexity 1 29 0 241 310 0 0 chr2 74727807 74727907 -175959947 + L1MC4a LINE L1 4751 4850 -1296 22 0 0 0 chr2 74728063 74728085 -175959769 + AT_rich Low_complexity Low_complexity 1 22 0 2238 101 3 7 chr2 74728085 74728392 -175959462 + AluSp SINE Alu 1 306 -7 337 296 25 6 chr2 74728400 74728559 -175959295 + L1MC4a LINE L1 4996 5157 -989 857 136 0 0 chr2 74728614 74728732 -175959122 + FLAM_C SINE Alu 1 118 -25 27 0 0 0 chr2 74728732 74728759 -175959095 + AT_rich Low_complexity Low_complexity 1 27 0 453 267 36 12 chr2 74728951 74729116 -175958738 + L1MC4a LINE L1 5737 5905 -1903 1853 137 46 3 chr2 74730035 74730319 -175957535 + AluJb SINE Alu 1 296 -16 916 283 30 4 chr2 74731049 74731286 -175956568 + MIR SINE MIR 2 244 -18 1969 128 10 13 chr2 74731584 74731889 -175955965 - AluSx SINE Alu -8 304 1 1835 157 10 0 chr2 74732061 74732354 -175955500 - AluJb SINE Alu -16 296 1 1968 135 0 14 chr2 74732602 74732899 -175954955 - AluJb SINE Alu -3 309 17 506 308 44 56 chr2 74732958 74733299 -175954555 - L1ME3A LINE L1 -209 5961 5625 328 294 37 20 chr2 74733300 74733438 -175954416 - L1ME3A LINE L1 -574 5590 5440 842 279 132 9 chr2 74733467 74733786 -175954068 + L2 LINE L2 2926 3283 -30 375 255 34 39 chr2 74733788 74733998 -175953856 - L1M2 LINE L1 -719 5443 5264 23 0 0 0 chr2 74734056 74734079 -175953775 + AT_rich Low_complexity Low_complexity 1 23 0 2568 68 0 0 chr2 74734082 74734390 -175953464 + AluY SINE Alu 1 308 -3 1950 138 3 20 chr2 74734448 74734752 -175953102 - AluJo SINE Alu -9 303 5 636 356 68 20 chr2 74734914 74735313 -175952541 + L2 LINE L2 2072 2489 -825 493 261 83 28 chr2 74735548 74735728 -175952126 - MLT1L LTR MaLR -6 609 420 5483 115 21 55 chr2 74735891 74735928 -175951926 - L1MA6 LINE L1 0 6300 6263 2107 123 0 7 chr2 74735928 74736220 -175951634 + AluSx SINE Alu 1 290 -22 5483 115 21 55 chr2 74736220 74736671 -175951183 - L1MA6 LINE L1 -37 6263 5798 2408 91 3 0 chr2 74736671 74736979 -175950875 + AluSx SINE Alu 1 309 -3 5483 115 21 55 chr2 74736979 74737634 -175950220 - L1MA6 LINE L1 -502 5798 5194 534 200 61 18 chr2 74737693 74737858 -175949996 - MLT1K LTR MaLR -4 584 413 775 268 130 21 chr2 74737889 74738173 -175949681 - MLT1K LTR MaLR -271 317 3 266 226 186 20 chr2 74738242 74738344 -175949510 - MER5A DNA MER1_type -70 119 1 2414 82 0 0 chr2 74738348 74738652 -175949202 + AluY SINE Alu 1 304 -7 182 364 7 50 chr2 74738861 74739001 -175948853 + L2 LINE L2 2920 3053 -219 220 271 85 0 chr2 74739058 74739117 -175948737 - L2 LINE L2 -1 3271 3208 318 255 122 56 chr2 74739146 74739450 -175948404 - L1MC/D LINE L1 -598 5564 5295 * 3177 212 55 37 chr2 74739446 74740037 -175947817 - L1ME1 LINE L1 -20 6957 6379 2024 120 28 3 chr2 74740037 74740320 -175947534 - AluSx SINE Alu -22 290 1 3177 212 55 37 chr2 74740320 74740862 -175946992 - L1ME1 LINE L1 -598 6379 5799 661 236 41 92 chr2 74740853 74741388 -175946466 - L1ME1 LINE L1 -2514 4443 3936 * 229 216 0 0 chr2 74741391 74741442 -175946412 + (TA)n Simple_repeat Simple_repeat 1 51 0 398 155 36 0 chr2 74742010 74742094 -175945760 - L1MB8 LINE L1 -5 6173 6087 1919 137 0 4 chr2 74742168 74742438 -175945416 + AluSx SINE Alu 35 303 -9 343 261 63 0 chr2 74742438 74742549 -175945305 + L1M4c LINE L1 1725 1842 -4542 410 213 115 17 chr2 74742560 74742734 -175945120 + L1M4c LINE L1 1951 2141 -4243 * 588 238 43 66 chr2 74742720 74742857 -175944997 - L1ME1 LINE L1 -3777 3213 3074 1816 158 35 3 chr2 74742857 74743141 -175944713 + AluJb SINE Alu 1 293 -19 588 238 43 66 chr2 74743141 74743437 -175944417 - L1ME1 LINE L1 -3916 3074 2794 5658 129 29 14 chr2 74743450 74744379 -175943475 - Tigger2 DNA MER2_type 0 2718 1776 217 85 0 64 chr2 74744379 74744426 -175943428 + (TTCCC)n Simple_repeat Simple_repeat 4 47 0 759 69 0 10 chr2 74744459 74744561 -175943293 - AluSg/x SINE Alu -48 264 164 447 207 41 12 chr2 74744563 74744732 -175943122 + T-rich Low_complexity Low_complexity 3 176 0 225 237 0 0 chr2 74744751 74744810 -175943044 + CT-rich Low_complexity Low_complexity 5 63 0 465 171 229 9 chr2 74744857 74744962 -175942892 + FLAM_C SINE Alu 1 128 -15 9004 149 76 4 chr2 74744967 74746619 -175941235 - Tigger2 DNA MER2_type -947 1771 1 2512 47 0 3 chr2 74746672 74746971 -175940883 + AluY SINE Alu 1 298 -13 297 0 0 0 chr2 74746981 74747020 -175940834 + (TG)n Simple_repeat Simple_repeat 1 72 0 297 0 0 0 chr2 74747020 74747053 -175940801 + (TG)n Simple_repeat Simple_repeat 2 34 0 1114 144 16 31 chr2 74747079 74747273 -175940581 - AluJb SINE Alu -31 281 91 387 232 10 0 chr2 74747351 74747450 -175940404 + L1M4c LINE L1 1049 1148 -5236 * 1802 284 49 4 chr2 74747443 74747975 -175939879 - L1ME1 LINE L1 -6303 556 1 13348 185 39 16 chr2 74747988 74748905 -175938949 - L1PB1 LINE L1 0 6867 5973 3333 111 45 10 chr2 74748905 74749399 -175938455 - MER9 LTR ERVK 0 511 1 13348 185 39 16 chr2 74749399 74752733 -175935121 - L1PB1 LINE L1 -894 5973 2217 2296 117 0 0 chr2 74752733 74753032 -175934822 - AluSg SINE Alu -11 299 1 13348 185 39 16 chr2 74753032 74755303 -175932551 - L1PB1 LINE L1 -4650 2217 1 1220 235 93 37 chr2 74755561 74755800 -175932054 - MLT1F LTR MaLR 0 542 318 1865 160 6 22 chr2 74755800 74756112 -175931742 - AluJo SINE Alu -4 308 2 1220 235 93 37 chr2 74756112 74756390 -175931464 - MLT1F LTR MaLR -224 318 4 2175 123 0 3 chr2 74757076 74757376 -175930478 + AluSx SINE Alu 1 299 -13 1163 285 125 17 chr2 74757585 74758116 -175929738 + L2 LINE L2 2667 2883 -430 1989 172 26 10 chr2 74758116 74758500 -175929354 + MLT1B LTR MaLR 1 390 0 1163 285 125 17 chr2 74758500 74758967 -175928887 + L2 LINE L2 2883 3298 -15 1634 228 41 47 chr2 74759035 74759548 -175928306 - MER74B LTR ERVL -74 548 39 251 220 77 0 chr2 74759726 74759817 -175928037 + L1M4 LINE L1 4931 5028 -1118 282 56 0 0 chr2 74760311 74760347 -175927507 + (CA)n Simple_repeat Simple_repeat 2 37 0 935 225 5 14 chr2 74760357 74760570 -175927284 - L2 LINE L2 0 3313 3103 322 323 45 27 chr2 74760632 74760852 -175927002 + L1MC/D LINE L1 3376 3599 -2547 361 314 77 42 chr2 74760866 74760889 -175926965 + L1MC/D LINE L1 5499 5520 -2288 2438 95 0 0 chr2 74760889 74761195 -175926659 - AluSg SINE Alu -4 306 1 361 314 77 42 chr2 74761195 74761483 -175926371 + L1MC/D LINE L1 5520 5821 -1987 303 250 86 26 chr2 74761572 74761688 -175926166 + HAL1b LINE L1 1188 1310 -38 201 247 22 90 chr2 74761968 74762057 -175925797 + MIR SINE MIR 98 180 -82 2014 83 32 4 chr2 74762276 74762553 -175925301 - AluSx SINE Alu -27 285 1 541 290 69 25 chr2 74764730 74764975 -175922879 + MIR SINE MIR 7 262 0 193 227 68 0 chr2 74765225 74765269 -175922585 + L2 LINE L2 3221 3267 -5 2383 47 13 7 chr2 74765727 74766027 -175921827 + AluY SINE Alu 1 302 -9 1368 194 66 28 chr2 74766138 74766427 -175921427 - AluJo SINE Alu -12 300 1 266 217 173 81 chr2 74766647 74767081 -175920773 - L1MC5 LINE L1 -37 7924 7451 2445 67 6 6 chr2 74767174 74767486 -175920368 + AluSp SINE Alu 1 312 -1 325 304 72 62 chr2 74767622 74767816 -175920038 - MIR SINE MIR -10 252 57 297 325 130 0 chr2 74767816 74767939 -175919915 - MIR SINE MIR -121 141 3 1647 246 98 53 chr2 74768341 74768503 -175919351 - L1MC4 LINE L1 -119 7923 7770 1568 160 50 21 chr2 74768503 74768785 -175919069 - AluJb SINE Alu -16 296 7 1647 246 98 53 chr2 74768785 74769493 -175918361 - L1MC4 LINE L1 -272 7770 7014 540 288 0 11 chr2 74769498 74769675 -175918179 - L1MC4a LINE L1 -1264 6544 6370 604 264 140 19 chr2 74769817 74770188 -175917666 - L1MC4a LINE L1 -1507 6301 5886 2225 93 7 3 chr2 74770236 74770536 -175917318 - AluSg SINE Alu -9 301 1 221 255 217 0 chr2 74771884 74771990 -175915864 + MIR SINE MIR 84 212 -50 23 54 0 0 chr2 74773080 74773117 -175914737 + AT_rich Low_complexity Low_complexity 1 37 0 932 90 16 0 chr2 74773201 74773323 -175914531 + AluSg/x SINE Alu 178 301 -11 2280 90 0 7 chr2 74774935 74775234 -175912620 + AluSc SINE Alu 2 298 -11 287 183 28 28 chr2 74775348 74775419 -175912435 - MER44D DNA MER2_type -1 604 534 1501 191 80 3 chr2 74776064 74776378 -175911476 + MER44D DNA MER2_type 1 608 -1 1423 184 49 4 chr2 74776492 74776758 -175911096 - AluJb SINE Alu -24 288 11 710 165 0 38 chr2 74776762 74776895 -175910959 - FLAM_C SINE Alu -5 128 1 1956 136 23 13 chr2 74777831 74778132 -175909722 + AluSx SINE Alu 2 305 -7 682 246 129 9 chr2 74778907 74779131 -175908723 + MIR SINE MIR 12 262 0 2359 89 3 6 chr2 74783280 74783593 -175904261 + AluSx SINE Alu 1 312 0 586 277 79 43 chr2 74784658 74784936 -175902918 - MER102a DNA MER1_type -33 297 10 2177 116 6 6 chr2 74785538 74785849 -175902005 + AluSq SINE Alu 1 311 -2 2259 74 40 0 chr2 74786042 74786340 -175901514 - AluY SINE Alu 0 311 2 1400 182 55 22 chr2 74787605 74787880 -175899974 + AluJo SINE Alu 13 296 -16 284 132 0 0 chr2 74788175 74788213 -175899641 - MER4D LTR ERV1 -74 798 761 443 388 25 0 chr2 74788237 74788433 -175899421 - MLT1K LTR MaLR -296 292 92 585 186 35 0 chr2 74788898 74789011 -175898843 + Tigger1 DNA MER2_type 1 117 -2301 1033 250 47 62 chr2 74789059 74789443 -175898411 - MLT1C LTR MaLR -80 387 10 750 125 86 8 chr2 74789873 74790001 -175897853 + Tigger1 DNA MER2_type 100 237 -2181 * 1033 162 139 0 chr2 74789995 74790211 -175897643 + Tigger1 DNA MER2_type 2172 2417 -1 2397 207 35 29 chr2 74790218 74790730 -175897124 - MLT2B3 LTR ERVL -39 515 1 445 245 98 49 chr2 74791023 74791186 -175896668 - MIR SINE MIR -22 240 70 569 272 118 7 chr2 74791235 74791547 -175896307 - L1MC4 LINE L1 -45 7973 7609 201 109 0 43 chr2 74791638 74791684 -175896170 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 1379 155 49 9 chr2 74792108 74792334 -175895520 - AluSx SINE Alu -73 239 5 244 367 0 0 chr2 74792451 74792541 -175895313 - MIR SINE MIR -125 137 48 330 169 31 0 chr2 74792634 74792699 -175895155 + L1MC5 LINE L1 7798 7864 -97 246 336 113 19 chr2 74793202 74793458 -175894396 + L2 LINE L2 1998 2277 -1037 23 33 0 0 chr2 74794278 74794308 -175893546 + AT_rich Low_complexity Low_complexity 1 30 0 269 313 16 0 chr2 74795895 74795959 -175891895 + Charlie1 DNA MER1_type 7 71 -2690 * 718 173 207 116 chr2 74795957 74796338 -175891516 + Charlie1 DNA MER1_type 2346 2761 0 1558 170 50 11 chr2 74796814 74797091 -175890763 - AluJo SINE Alu -24 288 1 1606 163 3 36 chr2 74797155 74797462 -175890392 + AluJb SINE Alu 2 298 -14 22 35 0 0 chr2 74798027 74798056 -175889798 + AT_rich Low_complexity Low_complexity 1 29 0 1453 185 14 32 chr2 74798368 74798517 -175889337 - AluJo SINE Alu -36 276 133 2181 98 3 26 chr2 74798517 74798824 -175889030 - AluSg SINE Alu -10 300 1 1453 185 14 32 chr2 74798824 74798955 -175888899 - AluJo SINE Alu -179 133 1 22 35 0 0 chr2 74799010 74799039 -175888815 + AT_rich Low_complexity Low_complexity 1 29 0 654 233 74 23 chr2 74799804 74799980 -175887874 - MER58A DNA MER1_type -13 211 27 1993 124 41 0 chr2 74800138 74800428 -175887426 + AluSx SINE Alu 1 302 -10 787 112 0 9 chr2 74800442 74800558 -175887296 + FLAM_C SINE Alu 1 115 -18 566 284 16 46 chr2 74801332 74801526 -175886328 - L1ME3A LINE L1 -88 6082 5895 24 32 0 0 chr2 74801740 74801771 -175886083 + AT_rich Low_complexity Low_complexity 1 31 0 6601 118 20 59 chr2 74801775 74803230 -175884624 - L1MA2 LINE L1 0 6304 4916 2849 206 24 19 chr2 74803224 74803816 -175884038 - L1M1 LINE L1 -6952 613 19 * 441 281 171 28 chr2 74803920 74804389 -175883465 - L1MC4a LINE L1 -1960 5848 5313 2018 75 100 0 chr2 74804523 74804803 -175883051 - AluY SINE Alu -3 308 1 317 73 0 0 chr2 74804877 74804918 -175882936 - MER4D LTR ERV1 -72 800 760 1732 179 0 10 chr2 74804921 74805211 -175882643 - AluJb SINE Alu -25 287 1 564 260 87 68 chr2 74805544 74805731 -175882123 - L1MC4a LINE L1 -1436 4710 4528 1574 178 0 20 chr2 74805731 74806023 -175881831 + AluJb SINE Alu 11 296 -16 564 260 87 68 chr2 74806023 74806201 -175881653 - L1MC4a LINE L1 -1618 4528 4338 550 311 77 32 chr2 74806308 74806684 -175881170 - MLT1J LTR MaLR -2 509 117 25 0 0 0 chr2 74807899 74807924 -175879930 + AT_rich Low_complexity Low_complexity 1 25 0 227 190 32 1 chr2 74808076 74808325 -175879529 + AluJb SINE Alu 1 289 -13 255 364 34 0 chr2 74808676 74808764 -175879090 - L2 LINE L2 -15 3257 3167 284 221 11 32 chr2 74809137 74809232 -175878622 + HAL1b LINE L1 646 738 -610 22 35 0 0 chr2 74809236 74809265 -175878589 + AT_rich Low_complexity Low_complexity 1 29 0 857 291 115 36 chr2 74809556 74810258 -175877596 - L2 LINE L2 0 3313 2565 2716 178 54 28 chr2 74810313 74810841 -175877013 + Tigger7 DNA MER2_type 1 514 -2073 702 99 30 0 chr2 74810841 74810942 -175876912 - U6 snRNA snRNA -1 106 3 2716 178 54 28 chr2 74810942 74811082 -175876772 + Tigger7 DNA MER2_type 514 2555 -32 313 262 97 0 chr2 74812787 74812890 -175874964 - MER103 DNA DNA -37 129 17 32 0 0 0 chr2 74813160 74813192 -175874662 + AT_rich Low_complexity Low_complexity 1 32 0 399 260 26 101 chr2 74813679 74813906 -175873948 - L2 LINE L2 -16 3297 3088 238 323 127 51 chr2 74814073 74814126 -175873728 - MIR SINE MIR -62 200 152 1989 121 28 0 chr2 74814126 74814408 -175873446 + AluSq SINE Alu 1 290 -23 238 323 127 51 chr2 74814408 74814512 -175873342 - MIR SINE MIR -110 152 31 1891 127 9 88 chr2 74814648 74814987 -175872867 - AluSx SINE Alu 0 312 1 184 318 111 24 chr2 74815300 74815426 -175872428 + L2 LINE L2 2593 2729 -585 1657 184 86 16 chr2 74816176 74816910 -175870944 + L1MD2 LINE L1 5446 6350 -9 325 330 103 12 chr2 74816936 74817168 -175870686 + L1M4 LINE L1 3692 3944 -2202 1103 199 43 0 chr2 74817192 74817403 -175870451 + AluJb SINE Alu 87 306 -6 220 313 0 0 chr2 74817419 74817483 -175870371 + (TA)n Simple_repeat Simple_repeat 2 65 0 22 0 0 0 chr2 74817573 74817595 -175870259 + AT_rich Low_complexity Low_complexity 1 22 0 756 189 92 6 chr2 74817936 74818100 -175869754 - AluSg/x SINE Alu 0 309 132 320 289 96 51 chr2 74818154 74818351 -175869503 + L1M4 LINE L1 4625 4830 -1316 2025 118 28 0 chr2 74818479 74818766 -175869088 + AluSx SINE Alu 6 300 -12 258 261 49 28 chr2 74818974 74819116 -175868738 + L1M LINE L1 5272 5416 -2392 1587 161 16 178 chr2 74819184 74819730 -175868124 + LTR22A LTR ERVK 1 458 0 7301 107 16 6 chr2 74819732 74820769 -175867085 + HERVK22 LTR ERVK 3 1050 -5787 762 233 55 0 chr2 74920941 74921104 -175766750 + AluJb SINE Alu 120 291 -21 275 297 45 27 chr2 74921473 74921584 -175766270 + L2 LINE L2 3156 3268 -4 1093 223 76 29 chr2 74921801 74922142 -175765712 - L1MB4 LINE L1 -19 6161 5805 332 286 0 0 chr2 74922301 74922378 -175765476 - L2 LINE L2 0 3272 3196 186 307 182 61 chr2 74923980 74924442 -175763412 + L2 LINE L2 2124 2641 -673 2202 84 0 4 chr2 74924793 74925068 -175762786 + AluSx SINE Alu 1 274 -38 610 165 91 0 chr2 74925169 74925290 -175762564 + MER20 DNA MER1_type 88 219 0 231 235 0 0 chr2 74925342 74925393 -175762461 - L2 LINE L2 -239 3074 3024 205 206 0 0 chr2 74925432 74925466 -175762388 + L2 LINE L2 3221 3254 -18 202 355 0 0 chr2 74925735 74925811 -175762043 - L2 LINE L2 0 3272 3197 845 245 46 42 chr2 74927566 74927803 -175760051 - MIR SINE MIR -2 260 23 250 224 7 7 chr2 74928746 74928889 -175758965 + (CA)n Simple_repeat Simple_repeat 2 144 0 309 239 0 0 chr2 74928925 74929063 -175758791 + (CA)n Simple_repeat Simple_repeat 2 139 0 220 343 179 21 chr2 74929334 74929474 -175758380 + MIR SINE MIR 51 212 -50 * 512 217 197 7 chr2 74929472 74929624 -175758230 - MER5A DNA MER1_type -6 183 3 404 256 169 36 chr2 74930936 74931066 -175756788 - MIR SINE MIR 0 262 151 875 244 24 24 chr2 74931066 74931275 -175756579 - MER3 DNA MER1_type 0 209 1 404 256 169 36 chr2 74931275 74931363 -175756491 - MIR SINE MIR -111 151 15 180 0 0 0 chr2 74931985 74932005 -175755849 + (CTGGGG)n Simple_repeat Simple_repeat 1 20 0 201 204 0 45 chr2 74932047 74932091 -175755763 - L2 LINE L2 -16 3256 3215 377 243 207 0 chr2 74932383 74932494 -175755360 + MER94 DNA DNA 1 134 0 361 311 10 10 chr2 74933044 74933147 -175754707 + MIR SINE MIR 56 158 -104 443 283 0 85 chr2 74933153 74933176 -175754678 - MIR SINE MIR 0 262 239 1066 229 8 59 chr2 74933176 74933250 -175754604 + MER58A DNA MER1_type 1 77 -2343 1700 95 136 11 chr2 74933250 74933514 -175754340 + AluSg1 SINE Alu 10 306 -3 1066 229 8 59 chr2 74933514 74933675 -175754179 + MER58A DNA MER1_type 77 224 0 443 283 0 85 chr2 74933675 74933828 -175754026 - MIR SINE MIR -23 239 101 1712 193 38 45 chr2 74934007 74934038 -175753816 + MER63B DNA MER1_type 7 37 -1025 186 43 0 0 chr2 74934038 74934061 -175753793 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 1712 193 38 45 chr2 74934061 74934277 -175753577 + MER63B DNA MER1_type 37 252 -810 1148 144 0 6 chr2 74934277 74934444 -175753410 + FRAM SINE Alu 1 166 0 1712 193 38 45 chr2 74934444 74934621 -175753233 + MER63B DNA MER1_type 252 429 -7 249 347 65 8 chr2 74936003 74936127 -175751727 - L2 LINE L2 0 3313 3183 5645 71 32 7 chr2 74936456 74937428 -175750426 - SVA Other Other -521 881 53 793 76 15 0 chr2 74937428 74937559 -175750295 + (GGGAGA)n Simple_repeat Simple_repeat 3 135 0 1855 116 0 4 chr2 74938029 74938296 -175749558 - AluSq SINE Alu -10 303 38 649 316 113 8 chr2 74938419 74938774 -175749080 - L2 LINE L2 -1 3312 2921 255 200 47 24 chr2 74938825 74938910 -175748944 - L1MC5 LINE L1 -35 7926 7840 197 0 0 67 chr2 74939979 74940009 -175747845 + (TTTTTG)n Simple_repeat Simple_repeat 4 31 0 203 170 0 19 chr2 74940903 74940938 -175746916 + (TGAA)n Simple_repeat Simple_repeat 1 36 -16 1966 132 30 0 chr2 74940938 74941242 -175746612 + AluSq SINE Alu 1 313 0 203 170 0 19 chr2 74941242 74941259 -175746595 + (TGAA)n Simple_repeat Simple_repeat 36 52 0 366 307 150 13 chr2 74944273 74944426 -175743428 + MIR SINE MIR 15 188 -74 203 352 28 9 chr2 74944977 74945085 -175742769 + MIR3 SINE MIR 67 176 -32 223 300 43 79 chr2 74945414 74945554 -175742300 + MIR SINE MIR 103 237 -25 418 259 176 42 chr2 74945602 74945795 -175742059 - MIR SINE MIR -19 243 25 481 267 199 34 chr2 74945802 74945978 -175741876 + MIR SINE MIR 18 222 -40 308 250 105 16 chr2 74950279 74950437 -175737417 + MIR SINE MIR 39 206 -56 298 366 108 21 chr2 74950640 74950919 -175736935 - L2 LINE L2 0 3272 2970 663 184 105 0 chr2 74951262 74951331 -175736523 - MIR SINE MIR -32 230 170 1929 129 49 0 chr2 74951331 74951617 -175736237 + AluSx SINE Alu 1 300 -12 663 184 105 0 chr2 74951617 74951699 -175736155 - MIR SINE MIR -92 170 63 203 339 196 7 chr2 74951724 74952010 -175735844 - L2 LINE L2 -798 2516 2177 314 287 43 0 chr2 74952681 74952775 -175735079 + L2 LINE L2 2223 2320 -994 379 278 39 67 chr2 74953089 74953344 -175734510 + L2 LINE L2 2827 3074 -198 343 296 216 28 chr2 74955585 74955761 -175732093 + MIR SINE MIR 42 250 -12 213 306 0 16 chr2 74955773 74955835 -175732019 - MIR SINE MIR -122 86 26 766 215 64 0 chr2 74956762 74956934 -175730920 - MER5A DNA MER1_type -6 183 1 295 323 42 0 chr2 74956984 74957080 -175730774 + MIR SINE MIR 103 202 -60 1782 125 10 34 chr2 74958849 74959145 -175728709 - AluSx SINE Alu -18 294 6 435 267 97 30 chr2 74959469 74959634 -175728220 + MIR SINE MIR 81 256 -6 198 91 0 0 chr2 74959740 74959773 -175728081 + (TG)n Simple_repeat Simple_repeat 2 34 0 216 0 0 0 chr2 74960114 74960138 -175727716 + (A)n Simple_repeat Simple_repeat 1 24 0 1097 192 35 5 chr2 74961166 74961369 -175726485 - MER3 DNA MER1_type 0 209 1 1739 153 14 0 chr2 74962324 74962606 -175725248 - AluJb SINE Alu -15 297 12 303 327 0 9 chr2 74962753 74962860 -175724994 - MIR SINE MIR -155 107 2 1791 145 38 7 chr2 74963022 74963312 -175724542 - AluJo SINE Alu -13 299 1 2275 71 10 10 chr2 74963321 74963631 -175724223 - AluY SINE Alu -1 310 1 192 391 43 0 chr2 74963667 74963782 -175724072 - L3 LINE CR1 -243 1334 1215 317 291 0 58 chr2 74963909 74964012 -175723842 - L1ME3 LINE L1 -6 6156 6060 399 136 5 95 chr2 74965481 74965873 -175721981 + (CA)n Simple_repeat Simple_repeat 1 356 0 312 93 10 82 chr2 74965885 74966079 -175721775 + (CA)n Simple_repeat Simple_repeat 1 180 0 278 126 3 96 chr2 74966168 74966568 -175721286 + (CA)n Simple_repeat Simple_repeat 1 362 0 225 179 0 87 chr2 74966659 74966855 -175720999 + (CA)n Simple_repeat Simple_repeat 1 179 0 378 280 172 33 chr2 74966933 74967294 -175720560 - LTR16A1 LTR ERVL 0 457 47 1236 125 0 0 chr2 74968267 74968443 -175719411 - AluSg/x SINE Alu 0 312 137 278 295 152 29 chr2 74970206 74970416 -175717438 - MLT1K LTR MaLR -37 551 316 185 62 0 31 chr2 74970673 74970705 -175717149 + (CAAAAA)n Simple_repeat Simple_repeat 3 33 0 239 356 77 5 chr2 74970750 74970944 -175716910 - L2 LINE L2 -557 2757 2550 206 219 16 0 chr2 74973322 74973386 -175714468 + (TG)n Simple_repeat Simple_repeat 2 66 0 278 318 65 73 chr2 74974573 74974941 -175712913 + L2 LINE L2 2852 3216 -56 651 292 75 13 chr2 74974949 74975175 -175712679 - MIR SINE MIR -3 259 20 2283 94 10 3 chr2 74976613 74976921 -175710933 - AluSq SINE Alu -3 310 1 356 179 158 0 chr2 74977877 74977972 -175709882 - MER103 DNA DNA -21 145 36 187 276 173 45 chr2 74978079 74978322 -175709532 + L2 LINE L2 2809 3082 -190 281 308 63 17 chr2 74978558 74978754 -175709100 - L1ME LINE L1 -517 5604 5401 818 202 49 16 chr2 74980881 74981064 -175706790 + MER5A DNA MER1_type 1 189 0 509 287 72 5 chr2 74981221 74981416 -175706438 + L2 LINE L2 2520 2727 -587 378 194 11 75 chr2 74981576 74981669 -175706185 + L2 LINE L2 3186 3272 0 757 254 5 29 chr2 74982681 74982890 -175704964 + MER3 DNA MER1_type 6 209 0 194 318 148 0 chr2 74985181 74985227 -175702627 - L3b LINE CR1 -3 1580 1522 400 298 43 39 chr2 74985227 74985460 -175702394 + MER5A DNA MER1_type 1 189 0 325 265 186 0 chr2 74985650 74985752 -175702102 - L3 LINE CR1 -87 1490 1370 214 191 0 0 chr2 74986567 74986609 -175701245 - L2 LINE L2 -208 3064 3023 180 275 165 0 chr2 74988250 74988341 -175699513 - L2 LINE L2 -213 3059 2954 735 288 131 67 chr2 74990579 74991369 -175696485 - L2 LINE L2 -193 3079 2231 218 257 147 9 chr2 74992596 74992705 -175695149 - MER91C DNA MER1_type -16 124 1 232 158 0 0 chr2 74992948 74992986 -175694868 - L2 LINE L2 -13 3259 3222 * 529 307 181 0 chr2 74992953 74993158 -175694696 - MIR SINE MIR -12 250 9 612 190 15 66 chr2 74993456 74993593 -175694261 + MER91B DNA MER1_type 1 130 -60 355 250 83 0 chr2 74993612 74993696 -175694158 + MER91B DNA MER1_type 93 183 -7 429 309 99 3 chr2 74993717 74993886 -175693968 - MIR SINE MIR -45 217 38 207 223 0 75 chr2 74994560 74994654 -175693200 + CT-rich Low_complexity Low_complexity 1 87 0 317 305 7 32 chr2 74996495 74996649 -175691205 + GA-rich Low_complexity Low_complexity 3 152 0 355 358 99 20 chr2 74997844 74998188 -175689666 + L2 LINE L2 2889 3259 -13 227 195 0 0 chr2 74998201 74998242 -175689612 + (TGGA)n Simple_repeat Simple_repeat 1 41 0 217 225 0 0 chr2 74998860 74998900 -175688954 - L2 LINE L2 -95 3218 3179 269 127 28 0 chr2 75000124 75000195 -175687659 - L1ME4a LINE L1 -2 6119 6047 213 271 0 0 chr2 75000276 75000324 -175687530 + (TCTCTG)n Simple_repeat Simple_repeat 2 49 0 287 231 58 0 chr2 75000953 75001057 -175686797 + (TG)n Simple_repeat Simple_repeat 1 110 0 379 134 34 60 chr2 75001083 75001439 -175686415 + (GTGTG)n Simple_repeat Simple_repeat 1 346 0 285 241 58 0 chr2 75001469 75001606 -175686248 + (TG)n Simple_repeat Simple_repeat 1 145 0 209 312 0 11 chr2 75002462 75002555 -175685299 + L2 LINE L2 2883 2974 -339 182 327 67 10 chr2 75002593 75002697 -175685157 + L2 LINE L2 2588 2697 -617 180 267 104 30 chr2 75002705 75002840 -175685014 + L3 LINE CR1 1423 1567 -10 454 303 111 5 chr2 75003030 75003238 -175684616 - MIR SINE MIR -12 250 21 212 298 0 0 chr2 75003467 75003524 -175684330 + GA-rich Low_complexity Low_complexity 2 58 0 588 309 125 19 chr2 75004178 75004479 -175683375 - L1ME4a LINE L1 -1 6189 5851 2256 101 0 3 chr2 75004479 75004766 -175683088 - AluSg SINE Alu -24 286 1 588 309 125 19 chr2 75004766 75004784 -175683070 - L1ME4a LINE L1 -339 5851 5836 317 264 121 59 chr2 75004984 75005412 -175682442 - L1ME4a LINE L1 -1710 4505 4033 2171 136 3 0 chr2 75005412 75005721 -175682133 - AluSx SINE Alu -2 310 1 317 264 121 59 chr2 75005721 75005838 -175682016 - L1ME4a LINE L1 -2182 4033 3925 2455 25 0 0 chr2 75005982 75006264 -175681590 - L1PA2 LINE L1 -1 6154 5873 1874 166 7 0 chr2 75006595 75006884 -175680970 + AluJb SINE Alu 1 291 -21 356 299 159 20 chr2 75007139 75007416 -175680438 - L1ME4a LINE L1 -2363 3852 3547 372 266 69 102 chr2 75007751 75008055 -175679799 - L1ME4a LINE L1 -2776 3439 3146 2301 263 107 70 chr2 75008085 75010854 -175677000 - L1M4 LINE L1 -1093 5053 2182 417 299 103 55 chr2 75010860 75011208 -175676646 - L1ME4a LINE L1 -4183 2213 1849 21 0 0 0 chr2 75011439 75011460 -175676394 + AT_rich Low_complexity Low_complexity 1 21 0 2061 142 3 16 chr2 75011475 75011785 -175676069 + AluJb SINE Alu 1 306 -6 1315 263 105 35 chr2 75011813 75012471 -175675383 - L1ME4a LINE L1 -4906 1299 596 412 260 47 12 chr2 75012477 75012646 -175675208 - L1ME4a LINE L1 -5934 271 97 181 301 108 0 chr2 75015459 75015542 -175672312 - L3b LINE CR1 -317 1266 1175 4201 275 121 23 chr2 75018177 75018272 -175669582 - L2 LINE L2 0 3313 3229 2529 83 0 3 chr2 75018272 75018585 -175669269 + AluSx SINE Alu 1 312 0 4201 275 121 23 chr2 75018585 75020571 -175667283 - L2 LINE L2 -84 3229 1046 629 189 28 7 chr2 75021026 75021169 -175666685 - L1MB8 LINE L1 -2 6176 6031 264 244 58 12 chr2 75021189 75021275 -175666579 - MIR SINE MIR -72 190 101 4139 138 22 2 chr2 75021278 75022109 -175665745 - L1MB7 LINE L1 -167 6017 5171 27 0 0 0 chr2 75022125 75022152 -175665702 + AT_rich Low_complexity Low_complexity 1 27 0 697 264 89 49 chr2 75022330 75022656 -175665198 - L1ME4a LINE L1 -260 5861 5523 799 247 96 4 chr2 75022718 75022957 -175664897 - MIR SINE MIR 0 262 2 189 217 43 0 chr2 75022989 75023035 -175664819 - L2 LINE L2 -314 2958 2911 550 183 35 0 chr2 75023198 75023313 -175664541 - MER58B DNA MER1_type -1 340 222 232 271 126 15 chr2 75023393 75023539 -175664315 - L1M4 LINE L1 -2286 3860 3701 288 0 0 0 chr2 75023540 75023572 -175664282 + (TG)n Simple_repeat Simple_repeat 2 33 0 235 276 9 0 chr2 75023741 75023846 -175664008 - L1M4 LINE L1 -2665 3481 3376 336 322 96 57 chr2 75023885 75023972 -175663882 - L1M4 LINE L1 -2847 3299 3217 2474 35 0 3 chr2 75023972 75024254 -175663600 - AluY SINE Alu -3 308 28 336 322 96 57 chr2 75024254 75024520 -175663334 - L1M4 LINE L1 -2929 3217 2932 258 284 84 25 chr2 75024540 75024779 -175663075 - L1M4 LINE L1 -3235 2911 2659 246 225 56 28 chr2 75025702 75025773 -175662081 - MIR3 SINE MIR -23 185 113 841 158 26 42 chr2 75027587 75027712 -175660142 - MER53 DNA DNA 0 189 66 4619 129 26 68 chr2 75027712 75028532 -175659322 - LTR1 LTR ERV1 0 785 1 841 158 26 42 chr2 75028532 75028596 -175659258 - MER53 DNA DNA -123 66 3 722 296 119 85 chr2 75029391 75030261 -175657593 + L1ME4a LINE L1 2081 2942 -3273 295 204 10 48 chr2 75030542 75030645 -175657209 + L1MC5 LINE L1 7832 7930 -31 905 319 15 63 chr2 75031220 75031824 -175656030 + HAL1b LINE L1 61 635 -713 653 137 0 0 chr2 75031867 75031962 -175655892 + FRAM SINE Alu 75 169 -7 422 290 35 21 chr2 75031976 75032121 -175655733 + HAL1b LINE L1 711 857 -491 468 333 74 31 chr2 75032654 75033002 -175654852 + L1M4 LINE L1 2245 2576 -3570 2106 141 0 0 chr2 75033002 75033317 -175654537 + AluSx SINE Alu 1 315 0 468 333 74 31 chr2 75033317 75033750 -175654104 + L1M4 LINE L1 2576 3061 -3085 1814 319 111 73 chr2 75033755 75035888 -175651966 + L1ME4a LINE L1 2960 5177 -1038 6139 23 0 0 chr2 75035888 75036626 -175651228 + L1PA4 LINE L1 5417 6154 -1 1814 319 111 73 chr2 75036626 75036654 -175651200 + L1ME4a LINE L1 5177 5202 -1013 234 158 0 74 chr2 75036676 75036771 -175651083 + (CATAA)n Simple_repeat Simple_repeat 4 91 0 534 317 65 44 chr2 75036821 75037234 -175650620 + L1ME4a LINE L1 5327 5748 -442 940 122 0 0 chr2 75037298 75037429 -175650425 + FLAM_C SINE Alu 1 131 -12 487 315 62 79 chr2 75037431 75037594 -175650260 + L1ME4a LINE L1 5785 5949 -241 1775 133 14 56 chr2 75037594 75037880 -175649974 + AluJo SINE Alu 1 274 -38 487 315 62 79 chr2 75037880 75038122 -175649732 + L1ME4a LINE L1 5949 6183 -7 280 329 20 31 chr2 75038716 75038941 -175648913 + CT-rich Low_complexity Low_complexity 1 222 0 346 272 6 43 chr2 75039184 75039346 -175648508 + (ATGGTG)n Simple_repeat Simple_repeat 6 161 0 2579 89 3 0 chr2 75039361 75039711 -175648143 - THE1A LTR MaLR -4 351 1 11443 87 10 2 chr2 75039711 75041278 -175646576 - THE1A-int LTR MaLR 0 1580 1 2653 79 3 0 chr2 75041278 75041632 -175646222 - THE1A LTR MaLR 0 355 1 204 362 58 71 chr2 75041875 75042201 -175645653 - L2 LINE L2 -66 3206 2885 953 237 30 4 chr2 75042276 75042508 -175645346 - MER96B DNA MER1_type? -170 247 10 1769 146 0 0 chr2 75043691 75043944 -175643910 + AluJo SINE Alu 60 312 0 913 186 19 93 chr2 75043995 75044306 -175643548 - L1MD3 LINE L1 0 7995 7708 815 185 11 2 chr2 75045209 75045681 -175642173 + (TG)n Simple_repeat Simple_repeat 1 476 0 539 222 7 0 chr2 75045694 75045847 -175642007 + (TG)n Simple_repeat Simple_repeat 1 154 0 432 236 273 0 chr2 75047303 75047468 -175640386 - MIR SINE MIR -17 245 36 241 250 36 0 chr2 75047745 75047801 -175640053 + MIR SINE MIR 90 147 -115 403 262 43 21 chr2 75049023 75049164 -175638690 - MIR3 SINE MIR -3 205 62 576 268 47 46 chr2 75049476 75049717 -175638137 + MIR SINE MIR 28 262 0 207 289 58 8 chr2 75050793 75050914 -175636940 - L2 LINE L2 -181 3091 2965 182 314 0 0 chr2 75051041 75051092 -175636762 + MIR SINE MIR 57 107 -155 183 256 231 0 chr2 75051430 75051508 -175636346 + L2 LINE L2 3171 3266 -6 194 341 8 16 chr2 75054469 75054595 -175633259 - L2 LINE L2 -2009 1305 1181 633 204 204 5 chr2 75056441 75056647 -175631207 + MIR SINE MIR 16 262 0 407 283 55 21 chr2 75056642 75056787 -175631067 + MIR SINE MIR 74 223 -39 * 457 158 12 0 chr2 75057717 75057799 -175630055 + L1MB7 LINE L1 5773 5855 -319 1466 135 14 28 chr2 75057899 75058188 -175629666 + L1MB7 LINE L1 5884 6168 -16 192 274 16 0 chr2 75058221 75058283 -175629571 + MIR SINE MIR 35 97 -111 309 256 60 97 chr2 75058505 75058774 -175629080 - L1ME4a LINE L1 0 6745 5901 359 271 0 38 chr2 75059051 75059184 -175628670 - L1ME4a LINE L1 -510 5611 5484 310 227 267 20 chr2 75059300 75059450 -175628404 - L1ME4a LINE L1 -838 5308 5122 267 31 0 0 chr2 75059778 75059810 -175628044 + (TG)n Simple_repeat Simple_repeat 1 32 0 219 333 16 49 chr2 75059904 75060087 -175627767 + (TGGA)n Simple_repeat Simple_repeat 4 180 0 349 225 0 0 chr2 75060292 75060372 -175627482 - MER116 DNA Mariner 0 80 1 3304 179 21 37 chr2 75060482 75060842 -175627012 + L1MB4 LINE L1 5430 5794 -386 1530 159 107 3 chr2 75060842 75061169 -175626685 - MER46B DNA MER2_type 0 236 1 3304 179 21 37 chr2 75061169 75061570 -175626284 + L1MB4 LINE L1 5794 6179 -1 810 299 80 40 chr2 75062643 75062792 -175625062 + L1ME4a LINE L1 5267 5409 -712 1632 127 101 29 chr2 75062792 75063108 -175624746 - MER44D DNA MER2_type 0 609 1 810 299 80 40 chr2 75063108 75063581 -175624273 + L1ME4a LINE L1 5409 5914 -207 414 250 50 8 chr2 75063622 75063742 -175624112 + L1ME4a LINE L1 5992 6116 -5 202 224 20 0 chr2 75064076 75064125 -175623729 - MIR SINE MIR -88 120 71 389 260 137 59 chr2 75064184 75064388 -175623466 - MIR SINE MIR -16 246 27 196 333 0 62 chr2 75064464 75064560 -175623294 + MIR SINE MIR 117 206 -56 435 296 21 0 chr2 75067047 75067189 -175620665 - MER69A DNA AcHobo -3 174 30 236 263 62 0 chr2 75067546 75067626 -175620228 + MER5A DNA MER1_type 15 99 -90 369 268 76 32 chr2 75071221 75071378 -175616476 - MLT1K LTR MaLR -4 584 421 229 276 59 69 chr2 75071807 75072010 -175615844 - L2 LINE L2 -430 2884 2684 189 107 0 0 chr2 75072262 75072290 -175615564 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 484 329 6 30 chr2 75072336 75072503 -175615351 - L2 LINE L2 -35 3237 3075 481 179 12 0 chr2 75072589 75072673 -175615181 + MER20 DNA MER1_type 4 88 -131 867 282 74 25 chr2 75072712 75073038 -175614816 + MLT1L LTR MaLR 264 605 -10 367 171 14 0 chr2 75073118 75073188 -175614666 + MER91B DNA MER1_type 60 130 -60 382 256 67 0 chr2 75073205 75073295 -175614559 + MER91B DNA MER1_type 90 185 -5 692 291 29 5 chr2 75075959 75076165 -175611689 + MIR SINE MIR 8 218 -44 462 212 136 8 chr2 75078672 75078804 -175609050 - MIR SINE MIR -16 246 98 558 292 164 55 chr2 75079031 75079397 -175608457 - L2 LINE L2 -1 3312 2907 479 253 93 11 chr2 75079746 75080100 -175607754 - L1ME4a LINE L1 -1 6120 5721 445 200 14 154 chr2 75081307 75081559 -175606295 + Charlie7 DNA MER1_type 326 535 -2077 2255 83 0 0 chr2 75081559 75081824 -175606030 + AluSq SINE Alu 2 266 -47 445 200 14 154 chr2 75081824 75081856 -175605998 + Charlie7 DNA MER1_type 535 570 -2042 213 195 0 0 chr2 75083658 75083699 -175604155 + G-rich Low_complexity Low_complexity 1 41 0 887 220 29 0 chr2 75084342 75084515 -175603339 + MER45A DNA AcHobo 1 178 0 202 266 202 21 chr2 75087245 75087339 -175600515 - L2 LINE L2 0 3272 3162 635 239 81 28 chr2 75089888 75090091 -175597763 - MIR SINE MIR -20 242 21 414 0 0 0 chr2 75090872 75090918 -175596936 + (TG)n Simple_repeat Simple_repeat 2 47 0 1574 185 43 56 chr2 75091628 75092022 -175595832 - MLT1B LTR MaLR -1 389 1 466 219 106 20 chr2 75092052 75092203 -175595651 + MER103 DNA DNA 3 166 0 2406 98 7 0 chr2 75092496 75092803 -175595051 - AluSg1 SINE Alu 0 309 1 419 236 169 27 chr2 75093093 75093241 -175594613 + MER5A DNA MER1_type 19 187 -2 390 42 0 0 chr2 75094248 75094296 -175593558 + (CAT)n Simple_repeat Simple_repeat 3 50 0 354 286 25 0 chr2 75094311 75094430 -175593424 - MER94 DNA DNA 0 134 13 310 246 17 25 chr2 75095730 75095848 -175592006 + (CATA)n Simple_repeat Simple_repeat 2 118 0 538 258 18 37 chr2 75097747 75097910 -175589944 + L2 LINE L2 3154 3313 0 642 347 33 30 chr2 75097962 75098360 -175589494 + L2 LINE L2 2511 2909 -405 192 324 120 9 chr2 75098513 75098621 -175589233 + L2 LINE L2 3148 3267 -5 216 298 0 0 chr2 75100386 75100443 -175587411 + MIR SINE MIR 95 151 -57 408 216 0 20 chr2 75102424 75102526 -175585328 - MLT1-int LTR MaLR -470 901 802 442 276 8 31 chr2 75102838 75102997 -175584857 - MIR SINE MIR -68 140 31 228 163 0 23 chr2 75103051 75103094 -175584760 + MER115 DNA AcHobo 1 42 -651 530 294 41 0 chr2 75104836 75104982 -175582872 + MIR SINE MIR 2 153 -109 369 333 15 0 chr2 75105285 75105559 -175582295 + (ATGGTG)n Simple_repeat Simple_repeat 1 278 0 4848 263 63 65 chr2 75105755 75106800 -175581054 + HAL1 LINE L1 2 1048 -1459 2097 110 37 13 chr2 75106800 75107100 -175580754 - AluSg SINE Alu -3 307 1 1751 218 0 0 chr2 75107110 75107403 -175580451 - AluJo SINE Alu -19 293 1 4848 263 63 65 chr2 75107403 75108856 -175578998 + HAL1 LINE L1 1057 2506 -1 264 317 5 54 chr2 75109351 75109537 -175578317 + (ATGGTG)n Simple_repeat Simple_repeat 1 177 0 207 394 0 25 chr2 75109562 75109722 -175578132 + (ATGGTG)n Simple_repeat Simple_repeat 4 159 0 493 333 53 18 chr2 75110012 75110239 -175577615 - MLT1I LTR MaLR -3 406 172 1365 279 57 5 chr2 75110239 75110623 -175577231 - MLT1I LTR MaLR 0 409 6 952 238 40 18 chr2 75111094 75111361 -175576493 - MLT1J1 LTR MaLR -159 287 15 321 271 135 30 chr2 75111369 75111502 -175576352 + L3 LINE CR1 1238 1384 -193 187 382 13 0 chr2 75111592 75111668 -175576186 - L3 LINE CR1 -112 1465 1389 203 222 0 22 chr2 75112154 75112199 -175575655 - L2 LINE L2 -5 3308 3265 2683 91 5 0 chr2 75112867 75113240 -175574614 - THE1C LTR MaLR 0 375 1 405 266 32 16 chr2 75113472 75113596 -175574258 - MIR SINE MIR -65 143 18 22 0 0 0 chr2 75114067 75114089 -175573765 + GC_rich Low_complexity Low_complexity 1 22 0 470 341 85 63 chr2 75115265 75115859 -175571995 - HAL1b LINE L1 -566 1758 285 2660 161 19 81 chr2 75115871 75116466 -175571388 - MER74A LTR ERVL 0 558 1 2006 152 82 3 chr2 75116622 75116977 -175570877 + Tigger3b DNA MER2_type 1 383 -848 785 195 97 5 chr2 75117395 75117580 -175570274 + L1MC4 LINE L1 6460 6661 -1381 1377 239 160 13 chr2 75117585 75118053 -175569801 - MLT1F1 LTR MaLR 0 567 31 802 46 40 26 chr2 75118068 75118219 -175569635 + (TAGA)n Simple_repeat Simple_repeat 4 156 0 315 223 181 11 chr2 75118219 75118308 -175569546 + L1MC4 LINE L1 6694 6798 -1244 289 55 77 44 chr2 75118308 75118399 -175569455 + (TAGA)n Simple_repeat Simple_repeat 4 97 0 280 280 170 0 chr2 75118400 75118500 -175569354 + L1MD3 LINE L1 6647 6763 -1232 403 271 114 12 chr2 75118526 75118692 -175569162 + L1MC4 LINE L1 6616 6798 -1244 1284 217 107 15 chr2 75118718 75119866 -175567988 + L1MC4 LINE L1 6616 7903 -139 396 302 34 50 chr2 75120179 75120307 -175567547 + MIR SINE MIR 87 213 -49 2135 182 85 36 chr2 75120307 75120730 -175567124 + MLT2B1 LTR ERVL 1 453 -67 1721 170 19 42 chr2 75120730 75121042 -175566812 - AluJo SINE Alu -5 307 3 2135 182 85 36 chr2 75121042 75121113 -175566741 + MLT2B1 LTR ERVL 453 519 -1 396 302 34 50 chr2 75121113 75121163 -175566691 + MIR SINE MIR 213 262 0 1118 345 64 29 chr2 75121173 75121981 -175565873 - L1M4 LINE L1 -2926 3220 2384 2130 137 33 0 chr2 75122536 75122873 -175564981 - MER7A DNA MER2_type 0 346 1 331 204 11 97 chr2 75122927 75123020 -175564834 + L1MC4 LINE L1 6619 6703 -1339 222 259 35 0 chr2 75126357 75126415 -175561439 + L2 LINE L2 3240 3299 -14 322 313 43 9 chr2 75126777 75126892 -175560962 + MLT1L LTR MaLR 416 534 -81 606 259 65 72 chr2 75126892 75127308 -175560546 - MLT1H LTR MaLR 0 549 23 401 306 19 44 chr2 75127329 75127489 -175560365 - MIR SINE MIR -6 256 101 467 274 33 20 chr2 75128813 75128966 -175558888 + MIR SINE MIR 86 240 -22 346 270 11 22 chr2 75133386 75133475 -175554379 + L2 LINE L2 3183 3270 -2 2309 163 41 7 chr2 75133482 75133894 -175553960 + MSTB LTR MaLR 1 426 0 1739 137 0 24 chr2 75134067 75134322 -175553532 - AluJb SINE Alu -20 292 44 289 254 14 0 chr2 75134733 75134804 -175553050 - MLT1I LTR MaLR -1 408 337 461 275 49 19 chr2 75134880 75135093 -175552761 - MLT1I LTR MaLR -224 222 1 201 74 0 0 chr2 75135753 75135780 -175552074 + (T)n Simple_repeat Simple_repeat 1 27 0 1159 303 156 18 chr2 75136154 75136923 -175550931 + L2 LINE L2 2194 3068 -245 3663 123 80 6 chr2 75137087 75137747 -175550107 + Tigger3b DNA MER2_type 524 1232 0 3321 121 44 0 chr2 75137792 75138338 -175549516 - L1PA16 LINE L1 -9 6157 5588 267 279 83 84 chr2 75138338 75139117 -175548737 - L1M4 LINE L1 -2942 3440 2662 338 22 43 0 chr2 75139117 75139163 -175548691 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1402 179 66 33 chr2 75139165 75139438 -175548416 - AluJo SINE Alu -30 282 1 919 222 0 6 chr2 75139441 75139617 -175548237 - FAM SINE Alu 0 175 1 267 279 83 84 chr2 75139617 75139821 -175548033 - L1M4 LINE L1 -3723 2659 2449 336 277 34 77 chr2 75139837 75140072 -175547782 - L1M4 LINE L1 -3950 2434 2210 544 300 15 56 chr2 75141342 75141616 -175546238 - MIR SINE MIR 0 262 2 2172 142 0 3 chr2 75141687 75141990 -175545864 - AluSx SINE Alu -10 302 1 1034 233 63 8 chr2 75143118 75143371 -175544483 - MLT1I LTR MaLR -4 405 139 490 309 0 0 chr2 75143543 75143666 -175544188 + MIR SINE MIR 29 151 -111 228 159 32 16 chr2 75144726 75144789 -175543065 + CT-rich Low_complexity Low_complexity 1 64 0 390 21 0 0 chr2 75144789 75144836 -175543018 + (CA)n Simple_repeat Simple_repeat 1 47 0 244 306 37 28 chr2 75145103 75145211 -175542643 + MLT1K LTR MaLR 140 248 -340 373 313 88 16 chr2 75145366 75145548 -175542306 + MLT1K LTR MaLR 394 588 0 231 36 0 0 chr2 75145770 75145798 -175542056 + (TG)n Simple_repeat Simple_repeat 1 28 0 374 139 14 0 chr2 75145798 75145870 -175541984 + GA-rich Low_complexity Low_complexity 2 74 0 615 174 0 62 chr2 75146367 75146511 -175541343 + FRAM SINE Alu 40 174 -2 958 214 24 0 chr2 75148035 75148245 -175539609 - L1ME LINE L1 -480 5686 5472 459 309 99 6 chr2 75148367 75148529 -175539325 + MIR SINE MIR 52 228 -34 255 320 0 0 chr2 75148544 75148619 -175539235 - MER91A DNA MER1_type -25 171 97 1862 148 10 30 chr2 75148945 75149250 -175538604 + AluJo SINE Alu 1 299 -13 190 247 75 21 chr2 75150834 75150927 -175536927 - MIR SINE MIR -63 145 48 242 238 171 29 chr2 75153400 75153505 -175534349 - MIR SINE MIR -59 149 30 2270 112 6 10 chr2 75153904 75154218 -175533636 - AluSp SINE Alu 0 313 1 187 191 71 0 chr2 75154272 75154314 -175533540 + MIR SINE MIR 99 143 -65 446 280 97 21 chr2 75154464 75154650 -175533204 + MIR SINE MIR 63 262 0 221 196 29 29 chr2 75157378 75157480 -175530374 + CT-rich Low_complexity Low_complexity 2 103 0 289 331 27 38 chr2 75159194 75159378 -175528476 + L3 LINE CR1 1289 1470 -107 180 302 0 0 chr2 75159845 75159888 -175527966 + L2 LINE L2 3136 3178 -94 198 264 69 28 chr2 75161442 75161514 -175526340 + L3 LINE CR1 1394 1468 -109 245 288 192 16 chr2 75162930 75163055 -175524799 - L3 LINE CR1 -9 1568 1422 309 314 75 25 chr2 75164724 75164883 -175522971 - MIR SINE MIR -73 189 23 184 311 44 22 chr2 75168785 75168875 -175518979 + L3b LINE CR1 1298 1389 -194 1050 227 184 50 chr2 75171015 75171499 -175516355 + MLT1H LTR MaLR 1 549 0 319 255 5 14 chr2 75171676 75171889 -175515965 + (ATGGTG)n Simple_repeat Simple_repeat 1 210 0 263 105 0 0 chr2 75171890 75171928 -175515926 - U2 snRNA snRNA -150 38 1 254 286 0 12 chr2 75171993 75172154 -175515700 + (ATG)n Simple_repeat Simple_repeat 1 159 0 420 315 123 0 chr2 75173537 75173683 -175514171 + MER91A DNA MER1_type 24 187 -9 350 326 99 36 chr2 75173858 75174395 -175513459 - L2 LINE L2 -72 3200 2640 182 170 0 43 chr2 75174796 75174843 -175513011 + GA-rich Low_complexity Low_complexity 1 45 0 213 39 0 0 chr2 75177208 75177234 -175510620 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 264 274 18 62 chr2 75177234 75177347 -175510507 - L2 LINE L2 -17 3296 3189 192 333 0 40 chr2 75180793 75180868 -175506986 - L3 LINE CR1 -428 1149 1078 260 333 68 8 chr2 75180875 75180992 -175506862 - L2 LINE L2 -1 3271 3148 850 194 19 39 chr2 75180998 75181204 -175506650 + MER3 DNA MER1_type 7 208 -1 196 318 64 0 chr2 75181312 75181422 -175506432 - L2 LINE L2 -206 3066 2950 970 356 42 24 chr2 75182021 75182644 -175505210 + L2 LINE L2 2324 2957 -357 307 316 209 0 chr2 75182682 75182878 -175504976 + L2 LINE L2 3077 3313 0 242 254 227 0 chr2 75183473 75183583 -175504271 + MIR SINE MIR 2 136 -126 23 0 0 0 chr2 75184026 75184049 -175503805 + AT_rich Low_complexity Low_complexity 1 23 0 418 294 162 15 chr2 75184296 75184493 -175503361 + MLT1K LTR MaLR 3 228 -360 26 0 0 0 chr2 75184625 75184651 -175503203 + AT_rich Low_complexity Low_complexity 1 26 0 378 275 97 68 chr2 75184902 75185228 -175502626 + L1ME LINE L1 4524 4872 -1274 2964 88 0 3 chr2 75185228 75185604 -175502250 - THE1C LTR MaLR 0 375 1 378 275 97 68 chr2 75185604 75185793 -175502061 + L1ME LINE L1 4872 5054 -1092 3004 160 61 24 chr2 75185801 75186440 -175501414 - L1MB8 LINE L1 -6 6172 5510 22 0 0 0 chr2 75186468 75186490 -175501364 + AT_rich Low_complexity Low_complexity 1 22 0 6596 146 16 14 chr2 75186499 75188065 -175499789 - L1MA6 LINE L1 0 6300 4895 469 281 55 39 chr2 75188122 75188603 -175499251 + L1ME LINE L1 5122 5607 -563 324 102 0 0 chr2 75188947 75188996 -175498858 + (CA)n Simple_repeat Simple_repeat 1 49 0 517 328 29 47 chr2 75189786 75190296 -175497558 + HAL1 LINE L1 1109 1609 -898 261 404 10 0 chr2 75190993 75191097 -175496757 + MIR SINE MIR 14 118 -144 192 167 0 0 chr2 75191156 75191186 -175496668 + L2 LINE L2 3218 3247 -25 395 265 95 43 chr2 75192907 75193160 -175494694 - L1ME4a LINE L1 -8 6113 5848 474 235 68 12 chr2 75193238 75193400 -175494454 - L1MC5 LINE L1 -37 7924 7754 264 222 263 10 chr2 75193866 75193965 -175493889 - MIR SINE MIR -63 145 22 204 194 0 0 chr2 75194930 75194966 -175492888 + CT-rich Low_complexity Low_complexity 2 37 0 244 334 210 27 chr2 75196385 75196984 -175490870 + L2 LINE L2 2248 2956 -358 354 232 16 72 chr2 75197087 75197212 -175490642 + MARNA DNA Mariner 172 289 -297 789 264 24 4 chr2 75197220 75197625 -175490229 - LTR16B LTR ERVL -14 450 1 747 288 62 69 chr2 75198624 75199044 -175488810 - LTR16A1 LTR ERVL -40 417 1 22 70 0 0 chr2 75200692 75200735 -175487119 + AT_rich Low_complexity Low_complexity 1 43 0 2313 77 0 0 chr2 75200855 75201153 -175486701 - AluSg SINE Alu -1 309 12 1129 198 98 49 chr2 75202746 75203114 -175484740 + MER58D DNA MER1_type 1 386 0 668 267 81 6 chr2 75203204 75203376 -175484478 + MIR SINE MIR 48 232 -30 1159 241 124 35 chr2 75203887 75204427 -175483427 + L1ME4a LINE L1 5265 5852 -269 267 288 167 15 chr2 75205817 75205949 -175481905 - L2 LINE L2 -3 3310 3159 433 302 146 8 chr2 75206334 75206772 -175481082 - L2 LINE L2 -267 3046 2538 1115 171 41 111 chr2 75206972 75207341 -175480513 + Charlie4a DNA MER1_type 4 346 -162 1619 165 16 29 chr2 75207773 75208089 -175479765 - AluJb SINE Alu 0 312 1 294 348 14 22 chr2 75209707 75209845 -175478009 + MIR SINE MIR 12 148 -114 234 157 206 39 chr2 75210360 75210462 -175477392 + MIR3 SINE MIR 38 156 -52 244 200 88 25 chr2 75210507 75210587 -175477267 + MIR3 SINE MIR 8 92 -116 862 233 123 100 chr2 75210663 75211721 -175476133 + L2 LINE L2 2245 3313 0 489 227 147 31 chr2 75211699 75211885 -175475969 + MIR SINE MIR 1 203 -59 * 328 119 179 15 chr2 75212963 75213030 -175474824 - MADE1 DNA Mariner -2 78 1 641 325 42 17 chr2 75214021 75214258 -175473596 - MIR SINE MIR -7 255 13 435 202 186 8 chr2 75215339 75215463 -175472391 - MIR SINE MIR -16 246 101 562 278 74 107 chr2 75216916 75217401 -175470453 - L2 LINE L2 0 3272 2804 243 257 54 14 chr2 75217739 75217813 -175470041 - MIR3 SINE MIR -50 158 82 3803 162 59 9 chr2 75217936 75218597 -175469257 + L1MC1 LINE L1 3 696 -5730 783 152 1 3 chr2 75218597 75218727 -175469127 + MLT1A1 LTR MaLR 252 365 0 2889 208 45 3 chr2 75218727 75219777 -175468077 + L1MC1 LINE L1 2189 3287 -3139 10524 189 18 22 chr2 75219800 75223212 -175464642 - L1PA16 LINE L1 -1 6165 2769 1531 104 5 0 chr2 75223212 75223424 -175464430 - AluSp SINE Alu -18 295 83 3800 189 19 6 chr2 75223425 75225732 -175462122 + L1MC1 LINE L1 4194 6613 0 332 275 70 0 chr2 75225812 75225933 -175461921 - MIR SINE MIR -64 144 45 186 243 103 65 chr2 75226723 75226830 -175461024 - L3 LINE CR1 -87 1490 1380 370 178 189 95 chr2 75227290 75227451 -175460403 - MLT1I LTR MaLR -5 404 228 803 221 77 5 chr2 75227451 75227646 -175460208 + MER3 DNA MER1_type 1 209 0 308 158 35 0 chr2 75227740 75227797 -175460057 - MLT1J2 LTR MaLR -324 126 68 802 248 93 24 chr2 75229495 75229889 -175457965 + MLT1G LTR MaLR 1 573 -17 193 350 161 7 chr2 75229966 75230109 -175457745 + L2 LINE L2 3106 3270 -2 263 285 164 34 chr2 75230367 75230574 -175457280 + L2 LINE L2 2808 3041 -231 14745 118 71 11 chr2 75230639 75231889 -175455965 + Tigger1 DNA MER2_type 5 1178 -1240 1769 69 0 0 chr2 75231889 75232120 -175455734 - AluY SINE Alu 0 311 81 14745 118 71 11 chr2 75232120 75233146 -175454708 + Tigger1 DNA MER2_type 1178 2418 0 277 204 65 86 chr2 75233177 75233270 -175454584 + L2 LINE L2 3182 3272 0 295 285 108 27 chr2 75233898 75234084 -175453770 - MIR3 SINE MIR -5 203 3 654 312 124 36 chr2 75235112 75235644 -175452210 - L2 LINE L2 -340 2974 2396 456 19 0 0 chr2 75236243 75236296 -175451558 + (CA)n Simple_repeat Simple_repeat 1 53 0 825 169 58 69 chr2 75236502 75236691 -175451163 + MER5A DNA MER1_type 1 187 -2 445 320 3 24 chr2 75237702 75237906 -175449948 + MIR SINE MIR 42 237 -25 316 208 129 50 chr2 75237936 75238037 -175449817 + L2 LINE L2 3163 3271 -1 222 262 49 0 chr2 75238695 75238756 -175449098 + MIR3 SINE MIR 99 162 -46 222 343 79 7 chr2 75239288 75239428 -175448426 - MER91A DNA MER1_type -46 150 1 219 280 0 0 chr2 75239455 75239505 -175448349 + C-rich Low_complexity Low_complexity 2 51 0 464 280 0 0 chr2 75239898 75240005 -175447849 - MER91A DNA MER1_type -2 194 88 391 356 53 33 chr2 75240619 75240873 -175446981 - MIR SINE MIR -4 258 3 394 352 77 9 chr2 75241199 75241523 -175446331 + L1ME LINE L1 5289 5634 -536 480 125 12 0 chr2 75241688 75241768 -175446086 - L1MD3 LINE L1 -511 7484 7404 320 183 0 0 chr2 75241768 75241828 -175446026 - MLT1F1 LTR MaLR -442 125 66 372 244 18 65 chr2 75241833 75242001 -175445853 - L1MC3 LINE L1 -651 7134 6975 3846 178 49 41 chr2 75242012 75243389 -175444465 - L1MB7 LINE L1 -16 6168 4783 2105 202 46 46 chr2 75243398 75243837 -175444017 - L1MC3 LINE L1 -789 6996 6555 360 43 0 0 chr2 75243837 75243883 -175443971 + (TC)n Simple_repeat Simple_repeat 2 47 0 2105 202 46 46 chr2 75243883 75244071 -175443783 - L1MC3 LINE L1 -1229 6556 6369 1440 343 153 13 chr2 75244092 75244960 -175442894 - L1M4 LINE L1 -953 5193 4204 357 364 22 22 chr2 75244950 75245134 -175442720 + L1 LINE L1 3328 3511 -2635 * 278 325 121 16 chr2 75245162 75245593 -175442261 - L1M4 LINE L1 -1977 4169 3694 1941 151 3 22 chr2 75245602 75245919 -175441935 - AluJb SINE Alu -1 311 1 395 278 61 39 chr2 75247538 75247709 -175440145 + L1ME3A LINE L1 5784 5937 -233 317 316 31 10 chr2 75248417 75248515 -175439339 + MIR SINE MIR 36 135 -73 357 252 0 4 chr2 75249489 75249580 -175438274 - MER69 DNA AcHobo -82 2444 7 560 286 15 51 chr2 75249582 75249778 -175438076 - MIR SINE MIR -25 237 49 2101 125 7 0 chr2 75250837 75251134 -175436720 + AluSx SINE Alu 1 299 -13 664 340 42 27 chr2 75251269 75251675 -175436179 + L2 LINE L2 2170 2581 -733 654 270 26 78 chr2 75251686 75251956 -175435898 + MIR SINE MIR 7 262 0 299 325 0 0 chr2 75251986 75252069 -175435785 + L2 LINE L2 2603 2685 -629 * 383 268 72 36 chr2 75252050 75252188 -175435666 - MIR SINE MIR -118 144 2 330 45 0 0 chr2 75253798 75253842 -175434012 + (CA)n Simple_repeat Simple_repeat 1 44 0 474 18 0 0 chr2 75255899 75255954 -175431900 + (TG)n Simple_repeat Simple_repeat 1 55 0 414 0 0 0 chr2 75256542 75256588 -175431266 + (TG)n Simple_repeat Simple_repeat 1 46 0 292 152 30 0 chr2 75259298 75259364 -175428490 + (TG)n Simple_repeat Simple_repeat 2 69 0 211 71 54 36 chr2 75259471 75259527 -175428327 + (CGGG)n Simple_repeat Simple_repeat 1 57 0 348 24 0 0 chr2 75259872 75259913 -175427941 + (CCG)n Simple_repeat Simple_repeat 1 82 0 348 24 0 0 chr2 75259913 75259954 -175427900 + (CCG)n Simple_repeat Simple_repeat 2 42 0 234 0 0 0 chr2 75260491 75260517 -175427337 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 217 98 0 78 chr2 75260667 75260718 -175427136 + (TCCCC)n Simple_repeat Simple_repeat 1 47 0 204 261 0 54 chr2 75262937 75263029 -175424825 + GA-rich Low_complexity Low_complexity 4 90 0 21 0 0 0 chr2 75263639 75263660 -175424194 + GC_rich Low_complexity Low_complexity 1 21 0 203 30 0 61 chr2 75264043 75264076 -175423778 + (TGGGGG)n Simple_repeat Simple_repeat 3 33 0 422 251 120 33 chr2 75264608 75265016 -175422838 + MER115 DNA AcHobo 58 532 -161 276 254 0 28 chr2 75266045 75266116 -175421738 - MIR SINE MIR -108 154 86 391 314 0 36 chr2 75271206 75271343 -175416511 - MIR3 SINE MIR -42 166 35 245 244 12 58 chr2 75274571 75274657 -175413197 + MIR3 SINE MIR 97 178 -30 188 279 0 0 chr2 75275676 75275719 -175412135 - L2 LINE L2 -87 3185 3143 182 321 31 74 chr2 75277286 75277448 -175410406 - L3b LINE CR1 -181 1402 1248 316 336 52 52 chr2 75278991 75279277 -175408577 - L1M4 LINE L1 -1643 4503 4218 374 190 38 0 chr2 75279834 75279913 -175407941 + MER103 DNA DNA 3 84 -82 185 270 52 61 chr2 75280965 75281080 -175406774 - L2 LINE L2 -87 3185 3072 365 323 16 0 chr2 75281279 75281403 -175406451 + GA-rich Low_complexity Low_complexity 2 127 0 380 144 222 0 chr2 75281961 75282051 -175405803 - MLT1K LTR MaLR -339 249 140 359 56 19 0 chr2 75282386 75282440 -175405414 + (TG)n Simple_repeat Simple_repeat 2 56 0 378 195 81 11 chr2 75282440 75282568 -175405286 - L1MD3 LINE L1 -3 7805 7661 1039 181 23 135 chr2 75282572 75282967 -175404887 + MER7A DNA MER2_type 1 346 0 3741 207 43 10 chr2 75282989 75283223 -175404631 - L1MD2 LINE L1 -240 6379 6154 1573 104 9 5 chr2 75283223 75283443 -175404411 + AluSq SINE Alu 79 299 -14 3741 207 43 10 chr2 75283443 75284189 -175403665 - L1MD2 LINE L1 -465 6154 5370 873 153 0 7 chr2 75284189 75284333 -175403521 - FLAM_C SINE Alu 0 143 1 1745 242 24 63 chr2 75284336 75284778 -175403076 - L1MD2 LINE L1 -1027 5379 4980 569 197 111 0 chr2 75284778 75284895 -175402959 - FLAM_A SINE Alu -3 130 1 1745 242 24 63 chr2 75284895 75285249 -175402605 - L1MD2 LINE L1 -1426 4980 4614 257 143 0 0 chr2 75285240 75285289 -175402565 - L1MC2 LINE L1 0 6344 6296 * 3517 216 62 27 chr2 75285284 75286770 -175401084 - L1MD2 LINE L1 -4385 2021 483 580 291 5 9 chr2 75286767 75286987 -175400867 - L1M4 LINE L1 -1379 4767 4549 * 784 196 32 0 chr2 75287274 75287432 -175400422 + L1MC1 LINE L1 6171 6333 0 881 195 26 45 chr2 75287643 75287718 -175400136 + L1 LINE L1 5080 5155 -991 892 77 77 8 chr2 75287718 75287848 -175400006 + MER85 DNA T2_type 1 139 0 881 195 26 45 chr2 75287848 75288039 -175399815 + L1 LINE L1 5155 5341 -805 1813 178 0 0 chr2 75288175 75288481 -175399373 - AluJo SINE Alu 0 306 1 318 280 105 14 chr2 75289596 75289739 -175398115 + MIR3 SINE MIR 32 187 -21 2311 144 29 5 chr2 75291138 75291520 -175396334 + MSTB LTR MaLR 2 392 -34 1972 156 3 10 chr2 75291520 75291822 -175396032 - AluJb SINE Alu 0 312 13 430 165 47 0 chr2 75291897 75291982 -175395872 - MIR SINE MIR -112 150 62 360 352 46 15 chr2 75295801 75295997 -175391857 - MIR3 SINE MIR 0 208 7 7895 83 6 22 chr2 75296175 75297264 -175390590 - MER11C LTR ERVK 0 1071 1 478 184 92 0 chr2 75297801 75297899 -175389955 - FLAM_C SINE Alu -10 133 27 674 260 139 22 chr2 75297906 75298229 -175389625 - L1ME3A LINE L1 -242 5928 5568 1951 194 26 81 chr2 75298829 75299395 -175388459 - MLT1F LTR MaLR -1 541 7 208 191 43 0 chr2 75299772 75299819 -175388035 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 23 33 0 0 chr2 75299868 75299898 -175387956 + AT_rich Low_complexity Low_complexity 1 30 0 638 285 82 9 chr2 75300006 75300322 -175387532 + HAL1b LINE L1 337 675 -673 207 0 0 0 chr2 75300504 75300527 -175387327 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 75300567 75300589 -175387265 + AT_rich Low_complexity Low_complexity 1 22 0 302 271 90 51 chr2 75300645 75300822 -175387032 + L1M2 LINE L1 2708 2891 -3958 493 295 220 22 chr2 75300834 75301197 -175386657 + L1M2 LINE L1 2909 3343 -3505 532 288 140 39 chr2 75301321 75301679 -175386175 + L2 LINE L2 2919 3312 -1 890 160 80 16 chr2 75301733 75301921 -175385933 + MER20 DNA MER1_type 1 200 -19 1685 151 32 65 chr2 75301988 75302166 -175385688 + L1MC1 LINE L1 5928 6111 -222 996 198 111 9 chr2 75302166 75302383 -175385471 - MER8 DNA MER2_type 0 239 1 1685 151 32 65 chr2 75302383 75302616 -175385238 + L1MC1 LINE L1 6111 6325 -8 410 260 233 0 chr2 75302661 75302807 -175385047 + MER5A DNA MER1_type 4 183 -6 978 130 28 23 chr2 75302807 75302984 -175384870 + MER5B DNA MER1_type 1 178 0 253 73 0 55 chr2 75303019 75303074 -175384780 + (CAAAAA)n Simple_repeat Simple_repeat 2 53 0 2400 113 0 0 chr2 75303961 75304272 -175383582 + AluSx SINE Alu 1 311 -1 553 189 121 78 chr2 75304347 75304553 -175383301 + MLT1A1 LTR MaLR 1 215 -150 1297 319 134 45 chr2 75305418 75306547 -175381307 + L1M2 LINE L1 3373 4601 -2247 355 309 186 10 chr2 75306550 75306754 -175381100 + MIR SINE MIR 10 249 -13 783 318 60 33 chr2 75306810 75307669 -175380185 + L1M2 LINE L1 4663 5545 -1303 283 289 22 22 chr2 75307826 75307961 -175379893 - L1MC4 LINE L1 -6 8036 7902 332 188 0 75 chr2 75307976 75308056 -175379798 - L1MCa LINE L1 -4358 2068 1995 * 374 233 8 18 chr2 75308043 75308164 -175379690 - L1MC4 LINE L1 -1338 6984 1995 2496 210 233 23 chr2 75308165 75309114 -175378740 - L1MC4 LINE L1 -124 7918 6771 23 0 0 0 chr2 75309114 75309137 -175378717 + AT_rich Low_complexity Low_complexity 1 23 0 1006 258 112 0 chr2 75309268 75309555 -175378299 + L2 LINE L2 2115 2433 -881 589 125 0 0 chr2 75309555 75309635 -175378219 - AluJ/FLAM SINE Alu -221 91 12 3130 233 44 13 chr2 75309649 75310791 -175377063 + L1ME1 LINE L1 5684 6861 -7 1789 164 41 14 chr2 75311042 75311335 -175376519 + AluJb SINE Alu 1 301 -11 873 277 76 51 chr2 75311779 75312425 -175375429 + HAL1b LINE L1 67 728 -620 22 0 0 0 chr2 75312429 75312451 -175375403 + AT_rich Low_complexity Low_complexity 1 22 0 246 254 137 49 chr2 75313063 75313268 -175374586 - MLT1K LTR MaLR 0 588 366 906 160 165 36 chr2 75313441 75313514 -175374340 + MER20 DNA MER1_type 1 63 -156 339 44 0 0 chr2 75313514 75313559 -175374295 + (TG)n Simple_repeat Simple_repeat 1 45 0 906 160 165 36 chr2 75313559 75313679 -175374175 + MER20 DNA MER1_type 63 219 0 332 140 0 0 chr2 75314207 75314264 -175373590 - Alu SINE Alu 0 302 246 360 307 229 29 chr2 75314277 75315111 -175372743 - L2 LINE L2 -575 2739 1739 2144 122 0 3 chr2 75315335 75315629 -175372225 - AluSx SINE Alu -19 293 1 23 78 0 0 chr2 75315733 75315784 -175372070 + AT_rich Low_complexity Low_complexity 1 51 0 253 221 179 43 chr2 75317997 75318137 -175369717 + L3 LINE CR1 535 693 -884 1742 243 91 40 chr2 75318446 75319124 -175368730 - MER50 LTR ERV1 0 734 22 632 169 4 48 chr2 75319249 75319487 -175368367 + CT-rich Low_complexity Low_complexity 1 248 -631 4242 120 18 2 chr2 75319487 75320111 -175367743 - MER41B LTR ERV1 0 635 2 216 0 0 0 chr2 75320113 75320137 -175367717 + (CCTG)n Simple_repeat Simple_repeat 2 25 0 632 169 4 48 chr2 75320137 75320169 -175367685 + CT-rich Low_complexity Low_complexity 249 879 0 256 377 121 0 chr2 75320368 75320567 -175367287 - L2 LINE L2 -452 2862 2640 3165 99 126 144 chr2 75320573 75321891 -175365963 - pTR5 LTR ERV1 0 2468 1524 286 302 60 34 chr2 75322016 75322165 -175365689 + MLT1L LTR MaLR 256 408 -207 186 278 67 0 chr2 75322607 75322697 -175365157 - L2 LINE L2 -2418 896 801 488 239 91 76 chr2 75323561 75323758 -175364096 + MIR SINE MIR 3 202 -60 1975 145 14 0 chr2 75325070 75325360 -175362494 - AluSx SINE Alu -18 294 1 2738 199 177 5 chr2 75327196 75328121 -175359733 - MER52A LTR ERV1 0 1278 181 414 0 0 0 chr2 75328395 75328441 -175359413 + (CA)n Simple_repeat Simple_repeat 1 46 0 234 191 0 0 chr2 75328537 75328584 -175359270 + CT-rich Low_complexity Low_complexity 3 49 0 202 293 75 28 chr2 75328634 75328740 -175359114 + MIR SINE MIR 20 130 -78 267 214 18 0 chr2 75329032 75329088 -175358766 - MLT1H1 LTR MaLR -336 219 163 467 264 52 52 chr2 75329766 75329940 -175357914 + MIR SINE MIR 24 197 -65 849 254 164 14 chr2 75330182 75330677 -175357177 - HAL1 LINE L1 0 2507 1939 1051 293 114 68 chr2 75330730 75331276 -175356578 - HAL1 LINE L1 -1641 866 347 2228 118 10 0 chr2 75331276 75331582 -175356272 - AluSx SINE Alu -3 309 1 1051 293 114 68 chr2 75331582 75331793 -175356061 - HAL1 LINE L1 -2160 347 65 2330 102 3 0 chr2 75331793 75332087 -175355767 + AluSp SINE Alu 1 295 -18 1051 293 114 68 chr2 75332087 75332154 -175355700 - HAL1 LINE L1 -2442 65 3 192 282 218 0 chr2 75332165 75332275 -175355579 - MIR SINE MIR -109 153 20 435 271 55 81 chr2 75332762 75333099 -175354755 - MLT1J1 LTR MaLR -114 332 1 382 308 119 13 chr2 75333654 75333813 -175354041 + HAL1b LINE L1 537 712 -636 266 269 11 21 chr2 75333957 75334050 -175353804 - MLT2F LTR ERVL -151 512 421 623 272 79 33 chr2 75334085 75334390 -175353464 - MLT2F LTR ERVL -344 319 1 4340 52 33 26 chr2 75334504 75335530 -175352324 + MER11A LTR ERVK 1 1266 0 2624 200 122 53 chr2 75335724 75336801 -175351053 + L1ME1 LINE L1 4345 5548 -618 1566 180 31 90 chr2 75336801 75336883 -175350971 + MLT1A1 LTR MaLR 1 86 -279 1940 145 17 7 chr2 75336883 75337173 -175350681 + AluSx SINE Alu 1 293 -19 1566 180 31 90 chr2 75337173 75337478 -175350376 + MLT1A1 LTR MaLR 86 365 0 2624 200 122 53 chr2 75337478 75337662 -175350192 + L1ME1 LINE L1 5548 5718 -448 1847 211 58 35 chr2 75337657 75338136 -175349718 - MLT1D LTR MaLR -13 492 3 * 1426 233 57 28 chr2 75338143 75338568 -175349286 + L1ME1 LINE L1 5725 6161 -5 25 0 0 0 chr2 75338570 75338595 -175349259 + AT_rich Low_complexity Low_complexity 1 25 0 43976 32 22 1 chr2 75338595 75344617 -175343237 - L1PA2 LINE L1 0 6155 1 288 304 97 31 chr2 75344884 75345111 -175342743 + L1 LINE L1 3589 3830 -2316 4586 131 29 24 chr2 75345628 75346345 -175341509 - MER72 LTR ERV1 -1 721 1 1916 139 24 3 chr2 75346439 75346733 -175341121 + AluJo SINE Alu 1 300 -12 335 282 48 94 chr2 75346787 75346916 -175340938 + L1MEc LINE L1 1348 1481 -1262 1945 169 68 11 chr2 75346916 75347270 -175340584 + THE1C LTR MaLR 2 375 0 335 282 48 94 chr2 75347270 75347667 -175340187 + L1MEc LINE L1 1481 1839 -904 1862 156 0 29 chr2 75347667 75347974 -175339880 + AluJb SINE Alu 1 298 -14 335 282 48 94 chr2 75347974 75348036 -175339818 + L1MEc LINE L1 1839 1902 -841 407 242 0 50 chr2 75348148 75348247 -175339607 + MER5A DNA MER1_type 11 104 -85 356 290 73 36 chr2 75348387 75348628 -175339226 + L1MEc LINE L1 2295 2577 -3893 289 250 74 46 chr2 75348642 75348852 -175339002 + L1 LINE L1 4812 5037 -1109 16557 186 19 6 chr2 75348966 75352341 -175335513 + L1PA14 LINE L1 2064 5480 -688 3511 54 2 2 chr2 75352313 75352756 -175335098 + L1PA5 LINE L1 5708 6150 -4 * 4628 128 9 16 chr2 75352759 75353106 -175334748 + L1PA14 LINE L1 5479 5820 -341 2486 75 0 0 chr2 75353106 75353411 -175334443 + AluY SINE Alu 1 305 -6 4628 128 9 16 chr2 75353411 75353750 -175334104 + L1PA14 LINE L1 5820 6160 -1 2034 259 58 20 chr2 75353752 75354575 -175333279 + L1ME3 LINE L1 5188 6044 -77 794 231 45 43 chr2 75354721 75355074 -175332780 - MLT1G LTR MaLR -2 588 140 309 211 53 0 chr2 75355335 75355411 -175332443 - MER116 DNA Mariner 0 80 1 431 338 65 47 chr2 75355483 75355912 -175331942 + L1ME LINE L1 4562 4998 -1148 741 283 71 35 chr2 75356085 75356474 -175331380 + L1ME LINE L1 5267 5677 -444 269 300 120 40 chr2 75356466 75356616 -175331238 + HAL1 LINE L1 9 170 -2337 * 738 260 164 77 chr2 75356630 75356890 -175330964 + HAL1 LINE L1 16 327 -2180 2353 118 203 100 chr2 75356890 75357492 -175330362 - MER4A LTR ERV1 0 664 1 738 260 164 77 chr2 75357492 75357646 -175330208 + HAL1 LINE L1 327 466 -2041 764 212 46 83 chr2 75357649 75357907 -175329947 - MLT1D LTR MaLR -196 271 16 343 227 98 80 chr2 75357914 75358077 -175329777 - L1MCa LINE L1 -2317 4109 3944 3189 239 64 34 chr2 75358183 75358788 -175329066 - L1MCa LINE L1 -2932 3494 2909 1975 157 3 7 chr2 75358788 75359093 -175328761 - AluJo SINE Alu -8 304 1 3189 239 64 34 chr2 75359093 75360037 -175327817 - L1MCa LINE L1 -3517 2909 1995 2360 81 13 7 chr2 75360037 75360346 -175327508 - AluY SINE Alu 0 311 1 3189 239 64 34 chr2 75360346 75360359 -175327495 - L1MCa LINE L1 -4431 1995 1984 1766 190 7 3 chr2 75360359 75360669 -175327185 - AluJo SINE Alu -1 311 1 3189 239 64 34 chr2 75360669 75360862 -175326992 - L1MCa LINE L1 -4442 1984 1536 417 227 145 29 chr2 75360856 75361028 -175326826 - L1MCa LINE L1 -6170 437 246 * 987 300 98 28 chr2 75361040 75361754 -175326100 - L1M4 LINE L1 -3220 2926 2163 210 320 0 0 chr2 75361894 75361997 -175325857 + T-rich Low_complexity Low_complexity 1 103 0 4873 190 16 34 chr2 75362348 75364051 -175323803 + L1MB3 LINE L1 4515 6182 -1 201 74 0 0 chr2 75364091 75364118 -175323736 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 267 266 73 37 chr2 75364140 75364249 -175323605 + MER5B DNA MER1_type 60 172 -6 1005 248 45 7 chr2 75364419 75364709 -175323145 + HAL1 LINE L1 1582 1882 -625 618 272 17 0 chr2 75364744 75364924 -175322930 + HAL1 LINE L1 1944 2126 -381 670 256 104 15 chr2 75364936 75365206 -175322648 + HAL1 LINE L1 2187 2480 -27 264 100 0 0 chr2 75366664 75366704 -175321150 + (TG)n Simple_repeat Simple_repeat 2 41 0 262 274 60 8 chr2 75367030 75367147 -175320707 + (TCTCTG)n Simple_repeat Simple_repeat 4 126 0 240 234 112 56 chr2 75367373 75367480 -175320374 - L2 LINE L2 -16 3256 3144 323 299 46 46 chr2 75368855 75369052 -175318802 - MLT1L LTR MaLR -26 589 393 365 244 134 61 chr2 75369242 75369406 -175318448 + MER20B DNA MER1_type 98 273 -510 678 242 114 19 chr2 75369595 75369806 -175318048 + MER20B DNA MER1_type 553 783 0 209 146 200 18 chr2 75369955 75370010 -175317844 + MIR3 SINE MIR 102 166 -42 422 202 186 8 chr2 75370723 75370847 -175317007 + MIR SINE MIR 101 246 -16 600 308 46 21 chr2 75371928 75372165 -175315689 + MIR SINE MIR 13 255 -7 352 119 179 15 chr2 75373156 75373223 -175314631 + MADE1 DNA Mariner 1 78 -2 252 330 17 52 chr2 75373640 75373755 -175314099 + MIR SINE MIR 17 127 -81 473 227 147 31 chr2 75374301 75374487 -175313367 - MIR SINE MIR -59 203 1 * 863 228 124 101 chr2 75374465 75375524 -175312330 - L2 LINE L2 0 3313 2245 236 200 88 25 chr2 75375600 75375680 -175312174 - MIR3 SINE MIR -116 92 8 221 157 206 39 chr2 75375726 75375828 -175312026 - MIR3 SINE MIR -52 156 38 278 348 14 22 chr2 75376344 75376482 -175311372 - MIR SINE MIR -114 148 12 1750 165 16 25 chr2 75378100 75378415 -175309439 + AluJb SINE Alu 1 312 0 1133 171 41 111 chr2 75378847 75379216 -175308638 - Charlie4a DNA MER1_type -162 346 4 393 289 156 13 chr2 75379416 75379858 -175307996 + L2 LINE L2 2538 3053 -260 245 280 167 15 chr2 75380241 75380373 -175307481 + L2 LINE L2 3159 3310 -3 642 229 72 0 chr2 75381764 75381917 -175305937 - L1ME4a LINE L1 -269 5852 5689 1168 161 121 37 chr2 75381935 75382233 -175305621 + MER33 DNA MER1_type 1 323 -1 4435 166 10 1 chr2 75383725 75384453 -175303401 - L1MC1 LINE L1 -1 6332 5599 9095 167 44 47 chr2 75384457 75386293 -175301561 + L1M4c LINE L1 42 1872 -4512 2091 132 7 3 chr2 75386293 75386596 -175301258 - AluSx SINE Alu -8 304 1 9095 167 44 47 chr2 75386596 75386661 -175301193 + L1M4c LINE L1 1872 1936 -4448 2466 151 17 78 chr2 75386697 75386930 -175300924 - L1M2 LINE L1 -500 5812 5627 513 218 60 60 chr2 75386930 75387087 -175300767 - FLAM_A SINE Alu 0 133 1 2466 151 17 78 chr2 75387087 75387375 -175300479 - L1M2 LINE L1 -685 5627 5323 * 2922 222 70 48 chr2 75387372 75388367 -175299487 - L1 LINE L1 -2900 3246 2230 285 197 26 26 chr2 75388361 75388427 -175299427 - L1MC1 LINE L1 -860 5286 5218 * 591 100 40 30 chr2 75388427 75388527 -175299327 - L1MB1 LINE L1 0 6168 6068 27 81 0 0 chr2 75389757 75389819 -175298035 + AT_rich Low_complexity Low_complexity 1 62 0 459 152 0 0 chr2 75390754 75390833 -175297021 + (TG)n Simple_repeat Simple_repeat 2 80 0 22 35 0 0 chr2 75391147 75391176 -175296678 + AT_rich Low_complexity Low_complexity 1 29 0 829 297 18 5 chr2 75391464 75391683 -175296171 - MIR SINE MIR -32 230 9 2070 141 7 7 chr2 75392710 75393015 -175294839 - AluSq SINE Alu -8 305 1 195 42 0 0 chr2 75393696 75393720 -175294134 + (TG)n Simple_repeat Simple_repeat 2 25 0 429 20 0 0 chr2 75394141 75394191 -175293663 + (TG)n Simple_repeat Simple_repeat 1 50 0 508 318 108 9 chr2 75396987 75397210 -175290644 - L3 LINE CR1 -1 1576 1332 220 329 59 24 chr2 75398445 75398530 -175289324 - L2 LINE L2 -24 3248 3161 1110 263 20 32 chr2 75398612 75399021 -175288833 - MLT1H LTR MaLR 0 549 97 295 189 274 21 chr2 75401149 75401244 -175286610 - L2 LINE L2 -5 3308 3190 182 311 0 16 chr2 75402274 75402335 -175285519 - L2 LINE L2 -3033 281 222 589 51 13 0 chr2 75402921 75403000 -175284854 - MADE1 DNA Mariner 0 80 1 345 261 94 44 chr2 75405039 75405219 -175282635 + MIR SINE MIR 74 262 0 7089 52 11 0 chr2 75405742 75407139 -175280715 - L1PA7 LINE L1 -2 6152 4752 254 203 0 27 chr2 75407158 75407170 -175280684 - L1MA10 LINE L1 -2 6332 6321 2274 205 87 40 chr2 75407170 75407828 -175280026 - L1ME1 LINE L1 -4 6162 5474 1407 251 157 13 chr2 75407844 75408186 -175279668 - L1MB7 LINE L1 -19 6165 5874 1938 109 4 0 chr2 75408186 75408452 -175279402 - AluSx SINE Alu -10 302 36 1407 251 157 13 chr2 75408452 75408816 -175279038 - L1MB7 LINE L1 -310 5874 5316 * 3492 205 94 78 chr2 75408806 75409605 -175278249 - L1ME1 LINE L1 -746 5400 4566 2186 99 0 7 chr2 75409605 75409898 -175277956 + AluSc SINE Alu 1 291 -18 3492 205 94 78 chr2 75409898 75410536 -175277318 - L1ME1 LINE L1 -1580 4566 3940 26 0 0 0 chr2 75410607 75410633 -175277221 + AT_rich Low_complexity Low_complexity 1 26 0 1712 127 8 0 chr2 75411096 75411341 -175276513 + AluSx SINE Alu 49 295 -17 338 0 0 23 chr2 75412143 75412186 -175275668 + (TG)n Simple_repeat Simple_repeat 2 43 0 480 365 98 30 chr2 75412676 75413106 -175274748 + L2 LINE L2 2810 3268 -4 1862 314 52 38 chr2 75413910 75414378 -175273476 + L2 LINE L2 2338 2798 -515 222 37 0 0 chr2 75414378 75414405 -175273449 + (CA)n Simple_repeat Simple_repeat 1 27 0 1862 314 52 38 chr2 75414405 75414902 -175272952 + L2 LINE L2 2798 3308 -5 1396 114 5 0 chr2 75416349 75416560 -175271294 - L1PA12 LINE L1 0 6168 5957 230 322 115 0 chr2 75416816 75416903 -175270951 + MIR3 SINE MIR 68 164 -44 1368 66 6 0 chr2 75416940 75417144 -175270710 - AluSq SINE Alu 0 327 123 2100 255 66 31 chr2 75418040 75418628 -175269226 + MLT1E2 LTR MaLR 18 626 0 494 263 175 31 chr2 75418689 75418850 -175269004 + MIR SINE MIR 2 207 -55 351 0 0 0 chr2 75418850 75418889 -175268965 + (TG)n Simple_repeat Simple_repeat 2 40 0 494 263 175 31 chr2 75418889 75418955 -175268899 + MIR SINE MIR 207 262 0 4963 149 38 28 chr2 75419011 75420064 -175267790 + L1MB5 LINE L1 5091 6138 -36 516 232 0 0 chr2 75421131 75421230 -175266624 - MIR SINE MIR -34 228 130 277 311 28 85 chr2 75422183 75422309 -175265545 - L2 LINE L2 -429 2885 2753 1823 86 63 34 chr2 75422309 75422578 -175265276 + AluSc SINE Alu 16 292 -17 277 311 28 85 chr2 75422578 75422734 -175265120 - L2 LINE L2 -561 2753 2619 381 336 72 34 chr2 75423005 75423297 -175264557 + L1ME4a LINE L1 5547 5849 -272 203 213 21 0 chr2 75423446 75423493 -175264361 + MIR SINE MIR 98 145 -63 343 218 136 9 chr2 75424024 75424134 -175263720 - MIR SINE MIR -55 207 84 540 45 0 0 chr2 75424355 75424422 -175263432 + (CATATA)n Simple_repeat Simple_repeat 1 67 0 818 211 41 1 chr2 75424516 75424691 -175263163 + MIR SINE MIR 72 251 -11 549 302 72 47 chr2 75425188 75425658 -175262196 + L1MC4a LINE L1 5416 5897 -1911 487 153 0 0 chr2 75425630 75425715 -175262139 + L1PA12 LINE L1 146 230 -7351 * 383 301 15 67 chr2 75425714 75425911 -175261943 + L1PA12 LINE L1 960 1685 -5896 * 11408 203 61 5 chr2 75425934 75428749 -175259105 + L1PA12 LINE L1 2471 5443 -2141 16620 115 18 115 chr2 75428749 75432258 -175255596 + L1P LINE L1 5 3174 -2972 1462 139 0 88 chr2 75432258 75432534 -175255320 + L1PA13 LINE L1 5883 6151 -12 35 0 0 0 chr2 75433605 75433640 -175254214 + AT_rich Low_complexity Low_complexity 1 35 0 214 301 14 14 chr2 75433667 75433740 -175254114 + MIR SINE MIR 67 139 -69 442 183 0 43 chr2 75434205 75434298 -175253556 + MER58B DNA MER1_type 253 341 0 2337 97 0 0 chr2 75434490 75434789 -175253065 - AluSc SINE Alu -10 299 1 23 92 0 0 chr2 75434808 75434873 -175252981 + AT_rich Low_complexity Low_complexity 1 65 0 377 77 0 77 chr2 75435237 75435302 -175252552 + AluJo SINE Alu 86 145 -157 3114 217 51 40 chr2 75436537 75437179 -175250675 + L1MD2 LINE L1 5492 6148 -211 225 0 0 0 chr2 75437179 75437204 -175250650 + (CA)n Simple_repeat Simple_repeat 2 26 0 3114 217 51 40 chr2 75437204 75437418 -175250436 + L1MD2 LINE L1 6148 6358 -1 245 280 0 97 chr2 75437472 75437527 -175250327 + MER5A DNA MER1_type 1 60 -129 360 0 0 0 chr2 75437527 75437567 -175250287 + (CA)n Simple_repeat Simple_repeat 2 41 0 245 280 0 97 chr2 75437567 75437677 -175250177 + MER5A DNA MER1_type 60 155 -34 368 308 11 16 chr2 75438501 75438642 -175249212 + MIR SINE MIR 21 158 -54 1889 190 17 125 chr2 75439406 75439844 -175248010 - MLT2B1 LTR ERVL 0 520 159 730 212 62 0 chr2 75439844 75439990 -175247864 - FRAM SINE Alu -11 155 1 1889 190 17 125 chr2 75439990 75440134 -175247720 - MLT2B1 LTR ERVL -361 159 1 228 86 0 0 chr2 75440181 75440216 -175247638 + (CA)n Simple_repeat Simple_repeat 2 36 0 279 323 39 26 chr2 75440402 75440557 -175247297 - L1ME2 LINE L1 -28 6136 5980 21 0 0 0 chr2 75441031 75441052 -175246802 + AT_rich Low_complexity Low_complexity 1 21 0 1797 224 41 65 chr2 75441112 75441741 -175246113 - L1ME2 LINE L1 -249 5921 5308 * 1932 254 40 30 chr2 75441739 75442279 -175245575 - L1ME2 LINE L1 -2452 3694 3142 2431 70 3 6 chr2 75442279 75442591 -175245263 - AluY SINE Alu 0 311 1 1932 254 40 30 chr2 75442591 75442910 -175244944 - L1ME2 LINE L1 -3004 3142 2827 * 7743 223 60 57 chr2 75442907 75447862 -175239992 - L1MC1 LINE L1 0 6569 1400 258 180 0 0 chr2 75447862 75447912 -175239942 - FLAM_A SINE Alu -4 129 80 7743 223 60 57 chr2 75447912 75448274 -175239580 - L1MC1 LINE L1 -5169 1400 1041 302 276 46 75 chr2 75448967 75449141 -175238713 - L1MC1 LINE L1 -5886 486 318 1667 137 3 92 chr2 75449818 75450132 -175237722 + AluJb SINE Alu 21 306 -6 381 347 80 10 chr2 75450966 75451165 -175236689 - MIR SINE MIR -30 232 20 22 0 0 0 chr2 75451871 75451893 -175235961 + AT_rich Low_complexity Low_complexity 1 22 0 1765 148 43 30 chr2 75451946 75452250 -175235604 + AluSq SINE Alu 1 308 -5 235 236 28 14 chr2 75453654 75453726 -175234128 + CT-rich Low_complexity Low_complexity 6 78 0 635 338 88 40 chr2 75455894 75456424 -175231430 + L2 LINE L2 2685 3272 0 270 136 0 0 chr2 75458156 75458200 -175229654 + (TTCTCC)n Simple_repeat Simple_repeat 4 47 0 194 213 0 27 chr2 75458196 75458271 -175229583 + CT-rich Low_complexity Low_complexity 1 73 0 * 56 39 0 0 chr2 75458952 75459029 -175228825 + AT_rich Low_complexity Low_complexity 1 77 0 620 295 100 0 chr2 75459881 75460081 -175227773 - MIR SINE MIR -12 250 31 699 172 16 0 chr2 75460087 75460209 -175227645 - FLAM_C SINE Alu -7 126 3 226 111 0 0 chr2 75460469 75460505 -175227349 + LTR61 LTR ERV1 4 39 -556 2586 147 19 7 chr2 75460750 75461171 -175226683 - MSTB LTR MaLR 0 426 1 2083 140 0 3 chr2 75461328 75461636 -175226218 + AluSx SINE Alu 1 307 -5 436 256 14 77 chr2 75461645 75461852 -175226002 - L1ME LINE L1 -304 5817 5624 2494 101 13 13 chr2 75461921 75462018 -175225836 - THE1C-int LTR MaLR -1202 378 282 14381 26 0 0 chr2 75462018 75464500 -175223354 + L1PA3 LINE L1 3687 6168 0 2494 101 13 13 chr2 75464500 75464779 -175223075 - THE1C-int LTR MaLR -1297 283 1 2018 131 64 17 chr2 75464779 75465137 -175222717 - THE1C LTR MaLR 0 375 1 2135 115 10 3 chr2 75465155 75465451 -175222403 - AluSq SINE Alu -15 298 1 252 77 0 0 chr2 75465791 75465830 -175222024 + (GCTG)n Simple_repeat Simple_repeat 1 39 0 351 137 0 0 chr2 75467223 75467274 -175220580 - 5S rRNA rRNA -70 51 1 522 286 15 6 chr2 75467666 75467823 -175220031 + MIR3 SINE MIR 2 163 -45 * 1084 302 143 27 chr2 75467813 75468290 -175219564 + L3 LINE CR1 1045 1576 -1 219 167 0 0 chr2 75469627 75469669 -175218185 + CT-rich Low_complexity Low_complexity 1 42 0 1817 172 3 3 chr2 75469669 75469971 -175217883 - AluJb SINE Alu -10 302 1 2393 201 71 42 chr2 75470072 75470693 -175217161 + L1ME2 LINE L1 5516 6154 -10 354 273 103 27 chr2 75470718 75470902 -175216952 + L1MC4 LINE L1 7724 8040 -2 22 0 0 0 chr2 75471016 75471038 -175216816 + AT_rich Low_complexity Low_complexity 1 22 0 1920 147 6 25 chr2 75471070 75471384 -175216470 + AluJb SINE Alu 1 308 -4 293 374 41 16 chr2 75471402 75471525 -175216329 - L2 LINE L2 -15 3257 3132 262 291 37 111 chr2 75472950 75473139 -175214715 - MER5A DNA MER1_type -2 187 13 289 247 155 15 chr2 75473144 75473264 -175214590 - MIR SINE MIR -61 147 30 1128 232 174 19 chr2 75473401 75473814 -175214040 - MLT1D LTR MaLR -2 503 27 1916 219 51 72 chr2 75473841 75474352 -175213502 - MLT1D-int LTR MaLR 0 1371 872 2388 202 10 49 chr2 75474433 75474942 -175212912 - MLT1D-int LTR MaLR -490 881 393 332 219 16 0 chr2 75474946 75475010 -175212844 - AluS SINE Alu -243 65 1 706 174 34 27 chr2 75475012 75475161 -175212693 - MLT1D-int LTR MaLR -1199 172 23 1108 192 49 122 chr2 75475183 75475568 -175212286 - MLT1D LTR MaLR 0 505 34 2336 89 0 0 chr2 75475569 75475861 -175211993 - AluY SINE Alu -19 292 1 6056 107 20 3 chr2 75475870 75476764 -175211090 - L1PA15 LINE L1 -1 6164 5256 1104 110 6 0 chr2 75476855 75477018 -175210836 - L1PA16 LINE L1 -3 6163 6000 515 263 119 0 chr2 75477049 75477209 -175210645 - MIR SINE MIR -52 210 32 337 133 0 0 chr2 75477232 75477314 -175210540 - Alu SINE Alu 0 317 236 619 261 97 18 chr2 75477616 75477842 -175210012 - L2 LINE L2 -1625 1689 1446 21 0 0 0 chr2 75478161 75478182 -175209672 + AT_rich Low_complexity Low_complexity 1 21 0 996 195 93 4 chr2 75478655 75478901 -175208953 + AluJo SINE Alu 44 311 -1 1786 176 0 3 chr2 75479096 75479385 -175208469 + AluJb SINE Alu 1 288 -24 28 0 0 0 chr2 75479385 75479413 -175208441 + AT_rich Low_complexity Low_complexity 1 28 0 272 347 0 0 chr2 75479700 75479775 -175208079 - L2 LINE L2 -50 3263 3189 1658 54 24 5 chr2 75480268 75480473 -175207381 + AluY SINE Alu 84 292 -19 1513 204 0 11 chr2 75480473 75480758 -175207096 - AluJo SINE Alu -30 282 1 295 267 163 0 chr2 75481044 75481130 -175206724 - L2 LINE L2 -1 3312 3213 186 263 75 25 chr2 75481732 75481812 -175206042 - L3 LINE CR1 -6 1571 1488 1540 144 115 7 chr2 75482962 75483232 -175204622 + AluY SINE Alu 1 299 -12 344 366 82 53 chr2 75483301 75483544 -175204310 - L2 LINE L2 -24 3248 2999 744 196 0 23 chr2 75483551 75483684 -175204170 + FLAM_C SINE Alu 1 130 -13 186 289 240 8 chr2 75483769 75483890 -175203964 - L2 LINE L2 -562 2752 2604 2133 142 85 2 chr2 75483907 75484309 -175203545 - L1MC2 LINE L1 -150 6194 5760 2301 220 37 17 chr2 75484317 75484972 -175202882 - L1MCa LINE L1 -1212 5214 4547 2957 259 16 11 chr2 75484975 75485962 -175201892 - L1MCa LINE L1 -2793 3633 2642 4480 66 0 5 chr2 75485984 75486563 -175201291 - L1PA6 LINE L1 -3 6151 5576 890 67 25 0 chr2 75486563 75486682 -175201172 + THE1C LTR MaLR 254 375 0 1691 168 33 7 chr2 75486714 75486988 -175200866 + AluJo SINE Alu 1 281 -31 5159 157 174 20 chr2 75486998 75487536 -175200318 - L1MCa LINE L1 -3903 2523 2069 1775 115 75 14 chr2 75487536 75487815 -175200039 - AluJo SINE Alu -16 296 1 5159 157 174 20 chr2 75487815 75488662 -175199192 - L1MCa LINE L1 -4357 2069 921 1135 256 31 3 chr2 75488662 75488982 -175198872 - L1MCa LINE L1 -6096 330 2 4730 173 47 23 chr2 75489457 75490550 -175197304 + L1MB8 LINE L1 4046 5112 -1066 1913 156 27 0 chr2 75490550 75490851 -175197003 + AluJb SINE Alu 2 310 -2 4730 173 47 23 chr2 75490851 75491843 -175196011 + L1MB8 LINE L1 5112 6178 0 279 256 12 24 chr2 75492525 75492607 -175195247 + L2 LINE L2 3233 3313 0 5808 105 26 17 chr2 75494162 75495357 -175192497 - L1PA15 LINE L1 0 6165 4964 2251 97 7 3 chr2 75495357 75495656 -175192198 + AluSg1 SINE Alu 1 300 -9 5808 105 26 17 chr2 75495656 75495696 -175192158 - L1PA15 LINE L1 -1201 4964 4926 607 340 102 61 chr2 75495922 75496510 -175191344 - L1M2 LINE L1 -6237 612 1 2182 132 3 0 chr2 75496639 75496949 -175190905 - AluSx SINE Alu -1 311 1 733 272 92 5 chr2 75497034 75497402 -175190452 - L1ME4a LINE L1 -209 5912 5513 2021 125 10 3 chr2 75497465 75497754 -175190100 + AluSx SINE Alu 1 291 -21 1091 144 101 13 chr2 75497771 75498095 -175189759 - L1P4 LINE L1 -480 5685 5311 324 235 78 0 chr2 75499515 75499617 -175188237 + MER103 DNA DNA 1 110 -56 7505 21 2 0 chr2 75500600 75501473 -175186381 + L1PA4 LINE L1 5281 6155 0 22 0 0 0 chr2 75501972 75501994 -175185860 + AT_rich Low_complexity Low_complexity 1 22 0 857 296 62 22 chr2 75502015 75502596 -175185258 - L1MEd LINE L1 -3388 2741 2138 1347 174 17 17 chr2 75503294 75503581 -175184273 - L1MD3 LINE L1 0 7995 7709 272 255 224 56 chr2 75503711 75503907 -175183947 + L1MC/D LINE L1 5488 5716 -2092 518 307 6 11 chr2 75504043 75504222 -175183632 - L1MEd LINE L1 -5699 420 243 230 321 25 25 chr2 75504334 75504415 -175183439 + MIR SINE MIR 176 256 -6 871 157 0 0 chr2 75504588 75504722 -175183132 + FLAM_C SINE Alu 1 134 -9 292 291 0 0 chr2 75504724 75504803 -175183051 + (CATATA)n Simple_repeat Simple_repeat 2 80 0 320 289 22 0 chr2 75504803 75504893 -175182961 - L1MC4 LINE L1 -1336 6706 6615 324 70 0 0 chr2 75504893 75504936 -175182918 + (CA)n Simple_repeat Simple_repeat 1 43 0 1054 172 0 0 chr2 75504936 75505099 -175182755 + AluJb SINE Alu 127 289 -23 375 398 56 3 chr2 75505234 75505591 -175182263 - L1ME LINE L1 -345 5776 5401 284 0 28 0 chr2 75506023 75506059 -175181795 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 792 251 65 74 chr2 75508015 75508382 -175179472 - L2 LINE L2 0 3313 2950 1312 203 17 0 chr2 75508602 75508903 -175178951 + L1MA4 LINE L1 5992 6297 -3 325 279 71 43 chr2 75509643 75509783 -175178071 - MIR SINE MIR -46 216 73 199 208 103 71 chr2 75509819 75509958 -175177896 + MIR3 SINE MIR 79 167 -41 238 279 0 0 chr2 75510547 75510608 -175177246 - L3b LINE CR1 -326 1257 1197 2062 108 52 0 chr2 75510792 75511078 -175176776 + AluSc SINE Alu 1 301 -8 235 239 0 0 chr2 75511272 75511318 -175176536 + (CATA)n Simple_repeat Simple_repeat 2 47 0 490 281 13 20 chr2 75511690 75511843 -175176011 + MIR SINE MIR 85 236 -26 191 315 99 45 chr2 75512156 75512267 -175175587 + L2 LINE L2 3139 3255 -17 835 72 80 32 chr2 75512689 75512814 -175175040 - AluSg/x SINE Alu -14 298 168 5027 70 4 0 chr2 75512815 75513505 -175174349 - L1PA8A LINE L1 -116 6015 5323 557 312 114 22 chr2 75513796 75514209 -175173645 - L1MCc LINE L1 -5824 599 149 2381 63 10 13 chr2 75515235 75515534 -175172320 - AluY SINE Alu -13 298 1 1890 173 55 0 chr2 75515777 75516123 -175171731 - MLT1A1 LTR MaLR 0 365 1 1115 258 74 67 chr2 75516341 75516885 -175170969 - MLT1H1 LTR MaLR -4 551 1 224 313 24 24 chr2 75516933 75517016 -175170838 - L3b LINE CR1 -207 1376 1294 285 255 106 21 chr2 75518436 75518530 -175169324 - MIR3 SINE MIR -21 187 86 224 227 27 93 chr2 75519221 75519296 -175168558 - L2 LINE L2 -17 3296 3227 206 366 53 38 chr2 75519441 75519572 -175168282 + L2 LINE L2 3137 3269 -3 668 171 0 0 chr2 75520220 75520331 -175167523 - AluJb SINE Alu -24 288 178 2461 87 3 0 chr2 75520462 75520797 -175167057 - AluSp SINE Alu 0 337 2 3909 109 7 0 chr2 75521094 75521652 -175166202 + L1PA16 LINE L1 5596 6157 -9 329 229 202 0 chr2 75522049 75522158 -175165696 + L1MC4a LINE L1 5520 5650 -471 639 300 123 4 chr2 75522193 75522420 -175165434 - MIR SINE MIR -8 254 1 359 309 52 52 chr2 75522433 75522724 -175165130 + L1MC4a LINE L1 5646 5936 -1872 185 255 0 0 chr2 75522965 75523016 -175164838 - L3 LINE CR1 -159 1418 1368 494 322 53 14 chr2 75523473 75523681 -175164173 + MIR SINE MIR 36 251 -11 258 295 74 40 chr2 75524396 75524545 -175163309 - L3 LINE CR1 -12 1565 1412 201 271 104 0 chr2 75526636 75526684 -175161170 - MIR SINE MIR -8 254 202 186 105 105 0 chr2 75526710 75526748 -175161106 - MIR SINE MIR -148 114 73 286 229 48 107 chr2 75528414 75528618 -175159236 + L1ME2 LINE L1 5730 5927 -243 27 0 0 0 chr2 75528893 75528920 -175158934 + AT_rich Low_complexity Low_complexity 1 27 0 232 325 129 12 chr2 75529023 75529186 -175158668 + MIR3 SINE MIR 19 200 -8 652 175 87 24 chr2 75529234 75529360 -175158494 + AluJo SINE Alu 1 134 -178 184 132 105 0 chr2 75529392 75529430 -175158424 - MIR3 SINE MIR -14 194 153 2368 98 0 0 chr2 75529543 75529848 -175158006 + AluSq SINE Alu 1 305 -8 224 182 52 26 chr2 75531133 75531210 -175156644 + (CTTA)n Simple_repeat Simple_repeat 4 82 0 228 220 17 161 chr2 75531861 75531979 -175155875 + MER102b DNA MER1_type 232 332 -9 572 289 66 48 chr2 75532390 75532618 -175155236 + MIR SINE MIR 20 251 -11 22 35 0 0 chr2 75533678 75533707 -175154147 + AT_rich Low_complexity Low_complexity 1 29 0 1282 213 48 46 chr2 75533815 75534228 -175153626 - Charlie7 DNA MER1_type -1921 691 278 189 107 0 0 chr2 75535114 75535142 -175152712 + (CA)n Simple_repeat Simple_repeat 1 28 0 * 261 0 0 0 chr2 75535141 75535170 -175152684 + (GA)n Simple_repeat Simple_repeat 2 30 0 863 208 23 6 chr2 75535677 75535850 -175152004 - MER58A DNA MER1_type -8 216 41 243 315 104 59 chr2 75536039 75536261 -175151593 + L2 LINE L2 3032 3263 -9 210 289 134 21 chr2 75537511 75537608 -175150246 - L2 LINE L2 -22 3250 3143 190 0 67 0 chr2 75538217 75538247 -175149607 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1334 251 28 24 chr2 75538979 75539438 -175148416 + L1MC4a LINE L1 5847 6307 -1501 1517 158 22 33 chr2 75539439 75539712 -175148142 + AluJo SINE Alu 32 301 -11 183 156 0 0 chr2 75539712 75539744 -175148110 + GA-rich Low_complexity Low_complexity 1 32 0 933 79 101 0 chr2 75539749 75540000 -175147854 + AluY SINE Alu 158 422 0 481 254 6 29 chr2 75540027 75540200 -175147654 + L1MC4 LINE L1 7054 7222 -820 1215 246 86 83 chr2 75540232 75540967 -175146887 + L1MC4 LINE L1 7305 8041 -1 5186 183 161 23 chr2 75541473 75542889 -175144965 + MER52A LTR ERV1 1 1754 -1 4869 31 5 7 chr2 75543417 75543997 -175143857 + L1PA5 LINE L1 5576 6154 0 202 273 60 15 chr2 75545035 75545111 -175142743 - MIR SINE MIR -102 106 28 25 0 0 0 chr2 75545426 75545451 -175142403 + AT_rich Low_complexity Low_complexity 1 25 0 2423 87 0 0 chr2 75548514 75548812 -175139042 - AluY SINE Alu -13 298 1 210 71 0 0 chr2 75553437 75553465 -175134389 + (TTC)n Simple_repeat Simple_repeat 2 29 0 321 307 36 24 chr2 75554556 75554722 -175133132 + MIR SINE MIR 47 214 -48 207 139 0 0 chr2 75555069 75555105 -175132749 + (TG)n Simple_repeat Simple_repeat 1 36 0 549 237 8 15 chr2 75556840 75556971 -175130883 - MER97b DNA MER1_type? -869 184 55 628 277 70 75 chr2 75557261 75557568 -175130286 - L1ME4a LINE L1 -197 5924 5617 2162 116 0 0 chr2 75557568 75557876 -175129978 + AluSx SINE Alu 1 308 0 628 277 70 75 chr2 75557876 75558235 -175129619 - L1ME4a LINE L1 -504 5617 5254 255 304 137 13 chr2 75558298 75558546 -175129308 - MLT1K LTR MaLR -2 586 328 266 203 14 29 chr2 75558683 75558752 -175129102 - MLT1L LTR MaLR -417 198 131 1974 152 0 13 chr2 75558905 75559220 -175128634 - AluJb SINE Alu -1 311 1 578 303 133 38 chr2 75559221 75559929 -175127925 - L1ME4a LINE L1 -983 5163 4378 359 325 56 0 chr2 75559985 75560111 -175127743 + L1ME3 LINE L1 5448 5580 -2228 1086 231 134 0 chr2 75560116 75560414 -175127440 + MER46C DNA MER2_type 1 338 0 657 266 75 0 chr2 75560434 75560633 -175127221 + L1ME3 LINE L1 5642 5855 -307 435 284 173 6 chr2 75560902 75561306 -175126548 - L1P4 LINE L1 -302 5819 5329 449 308 15 8 chr2 75561480 75561613 -175126241 - MLT1J LTR MaLR -145 366 233 767 183 0 0 chr2 75561728 75561859 -175125995 - FRAM SINE Alu -10 166 36 21 0 0 0 chr2 75561860 75561881 -175125973 + AT_rich Low_complexity Low_complexity 1 21 0 405 291 0 0 chr2 75561886 75562009 -175125845 - MLT1L LTR MaLR -325 244 128 313 247 12 0 chr2 75562034 75562115 -175125739 + L2 LINE L2 3227 3308 -5 2772 166 55 9 chr2 75562349 75562914 -175124940 - L1MD3 LINE L1 -1 7994 7404 362 165 0 129 chr2 75562914 75562999 -175124855 - MLT1L LTR MaLR -442 125 52 7949 19 1 0 chr2 75563135 75564171 -175123683 + L1PA3 LINE L1 5141 6177 0 972 227 93 23 chr2 75564171 75564471 -175123383 - L1M4 LINE L1 -2186 3960 3640 180 309 65 41 chr2 75566097 75566220 -175121634 + L2 LINE L2 2354 2479 -835 207 0 0 0 chr2 75567647 75567670 -175120184 + (T)n Simple_repeat Simple_repeat 1 23 0 2086 129 3 10 chr2 75568149 75568458 -175119396 + AluSq SINE Alu 1 307 -6 537 265 20 0 chr2 75569808 75569959 -175117895 - MER58B DNA MER1_type -2 339 186 345 287 108 15 chr2 75571884 75572079 -175115775 + LTR16C LTR ERVL 26 238 -253 337 222 40 16 chr2 75572146 75572272 -175115582 + LTR16C LTR ERVL 361 489 -2 383 237 50 14 chr2 75572412 75572551 -175115303 - LTR33 LTR ERVL -376 145 2 563 322 22 6 chr2 75572958 75573138 -175114716 - MER91A DNA MER1_type -13 183 1 381 267 95 12 chr2 75574758 75574928 -175112926 - MIR SINE MIR -55 207 24 552 286 5 62 chr2 75575148 75575372 -175112482 + MIR SINE MIR 33 243 -19 323 330 0 10 chr2 75575703 75575803 -175112051 + MIR SINE MIR 24 122 -140 234 206 29 29 chr2 75576223 75576291 -175111563 + MIR3 SINE MIR 129 196 -12 308 224 112 22 chr2 75577562 75577696 -175110158 - L1ME4a LINE L1 -2 6914 6769 243 0 0 0 chr2 75577704 75577731 -175110123 + (TG)n Simple_repeat Simple_repeat 2 28 0 457 336 74 8 chr2 75577763 75578007 -175109847 + MIR SINE MIR 1 260 -2 3570 190 50 18 chr2 75578278 75578320 -175109534 - L1ME4a LINE L1 -204 6757 6718 2218 124 117 33 chr2 75578320 75578538 -175109316 - MSTA LTR MaLR 0 428 230 2259 106 7 3 chr2 75578538 75578840 -175109014 - AluSq SINE Alu -10 303 1 2218 124 117 33 chr2 75578840 75579016 -175108838 - MSTA LTR MaLR -198 230 1 3570 190 50 18 chr2 75579016 75579119 -175108735 - L1ME4a LINE L1 -243 6718 6620 1965 148 42 3 chr2 75579119 75579449 -175108405 + MER2 DNA MER2_type 1 343 -1 3570 190 50 18 chr2 75579449 75580656 -175107198 - L1ME4a LINE L1 -341 6620 5357 1163 239 69 101 chr2 75580664 75581311 -175106543 - L1MCc LINE L1 -4887 1536 1335 751 171 0 23 chr2 75581311 75581440 -175106414 + FLAM_A SINE Alu 5 130 -3 1163 239 69 101 chr2 75581440 75581667 -175106187 - L1MCc LINE L1 -5088 1335 1102 1023 211 9 17 chr2 75581660 75581892 -175105962 - L1MCc LINE L1 -6174 249 20 * 426 326 123 7 chr2 75581892 75582202 -175105652 - L1M4 LINE L1 -2215 3931 3586 434 278 160 35 chr2 75582584 75582897 -175104957 + HAL1b LINE L1 391 742 -606 328 289 25 31 chr2 75583093 75583110 -175104744 - L1MA10 LINE L1 -1 6333 6317 1056 260 23 27 chr2 75583110 75583410 -175104444 - L1ME1 LINE L1 -5 6230 5932 * 2411 226 43 34 chr2 75583409 75584202 -175103652 - L1ME1 LINE L1 -1399 4816 4017 1612 37 0 0 chr2 75584200 75584389 -175103465 + L1P LINE L1 4515 4703 -1443 * 239 314 49 41 chr2 75584760 75584918 -175102936 - MIR SINE MIR -58 150 16 2708 233 52 71 chr2 75585210 75585621 -175102233 - L1M4 LINE L1 -2698 3448 3031 264 135 0 0 chr2 75585621 75585658 -175102196 - MER4A LTR ERV1 -71 593 557 2708 233 52 71 chr2 75585658 75586066 -175101788 - L1M4 LINE L1 -3115 3031 2617 1427 180 127 24 chr2 75586066 75586405 -175101449 - MLT1A2 LTR MaLR 0 374 1 2708 233 52 71 chr2 75586405 75586860 -175100994 - L1M4 LINE L1 -3529 2617 2162 929 173 7 0 chr2 75586894 75587044 -175100810 + MER58B DNA MER1_type 191 341 0 1710 246 89 18 chr2 75587044 75587707 -175100147 - L1ME1 LINE L1 -4121 2275 1566 871 198 217 19 chr2 75587708 75587853 -175100001 - AluSg1 SINE Alu 0 309 194 180 0 0 0 chr2 75587853 75587873 -175099981 + (TTG)n Simple_repeat Simple_repeat 2 21 0 871 198 217 19 chr2 75587873 75587985 -175099869 - AluSg1 SINE Alu -115 194 1 1499 269 63 63 chr2 75587986 75588989 -175098865 - L1ME1 LINE L1 -4815 1581 579 384 316 77 5 chr2 75589184 75589380 -175098474 - L1ME1 LINE L1 -6095 301 92 231 229 60 12 chr2 75589562 75589645 -175098209 - L1ME4a LINE L1 -109 6012 5926 334 301 112 45 chr2 75589810 75590122 -175097732 + L1ME3A LINE L1 4315 4647 -1499 389 319 22 35 chr2 75591312 75591544 -175096310 + L1MC4a LINE L1 5719 5947 -1861 611 322 75 12 chr2 75592412 75592902 -175094952 + L1ME3A LINE L1 4733 5253 -893 1021 290 90 15 chr2 75592973 75593517 -175094337 + L1ME3A LINE L1 5367 5951 -219 381 261 120 56 chr2 75593981 75594556 -175093298 + L1ME4a LINE L1 5389 6000 -121 411 289 98 62 chr2 75594698 75594954 -175092900 + L1M4 LINE L1 4168 4432 -1714 492 266 122 58 chr2 75595079 75595357 -175092497 + L1M4 LINE L1 4475 4770 -1376 367 283 101 32 chr2 75595366 75595585 -175092269 + L1M4 LINE L1 4804 5037 -1109 373 276 16 0 chr2 75595713 75595840 -175092014 - LTR16A LTR ERVL -2 448 320 390 91 20 50 chr2 75595840 75595939 -175091915 + (GGAA)n Simple_repeat Simple_repeat 1 96 0 909 262 122 25 chr2 75595945 75596139 -175091715 - LTR16A LTR ERVL -98 352 178 1730 216 195 8 chr2 75596139 75596617 -175091237 + MLT1F1 LTR MaLR 1 567 0 909 262 122 25 chr2 75596617 75596743 -175091111 - LTR16A LTR ERVL -272 178 1 1048 277 20 0 chr2 75597316 75597569 -175090285 - MIR SINE MIR 0 262 5 238 255 0 0 chr2 75597589 75597636 -175090218 - tRNA-Gly-GGG tRNA tRNA -7 67 21 195 42 0 0 chr2 75597686 75597710 -175090144 + (GA)n Simple_repeat Simple_repeat 1 24 0 2115 148 44 14 chr2 75598107 75598471 -175089383 - THE1C LTR MaLR 0 375 1 276 325 18 18 chr2 75598932 75599046 -175088808 + MER5A DNA MER1_type 76 189 0 588 318 118 9 chr2 75600944 75601155 -175086699 - MIR SINE MIR -25 237 4 216 67 0 0 chr2 75601448 75601478 -175086376 + (TCCA)n Simple_repeat Simple_repeat 3 32 0 219 253 137 21 chr2 75601480 75601575 -175086279 - L2 LINE L2 -33 3280 3175 756 76 15 15 chr2 75601575 75601706 -175086148 + (TCTA)n Simple_repeat Simple_repeat 3 133 0 256 192 27 68 chr2 75602686 75602759 -175085095 + GA-rich Low_complexity Low_complexity 4 73 0 473 294 141 49 chr2 75604425 75604751 -175083103 - MLT1J2 LTR MaLR -21 429 74 422 207 12 0 chr2 75604889 75604971 -175082883 - MIR SINE MIR -27 235 153 578 157 65 19 chr2 75604974 75605082 -175082772 + HsTC2 DNA Tc2 4 116 -1782 248 162 29 73 chr2 75605075 75605143 -175082711 + HsTC2 DNA Tc2 1221 1285 -613 * 508 200 21 0 chr2 75605145 75605240 -175082614 - MIR SINE MIR -125 137 41 1527 310 159 19 chr2 75607087 75607873 -175079981 + L3 LINE CR1 225 1120 -457 563 280 32 0 chr2 75607870 75607995 -175079859 - L2 LINE L2 0 3272 3144 * 901 255 115 14 chr2 75608630 75608908 -175078946 - MLT1I LTR MaLR -103 306 1 272 266 70 23 chr2 75609066 75609194 -175078660 + LTR67 LTR ERVL 424 557 0 280 337 26 23 chr2 75609246 75609417 -175078437 - MIR3 SINE MIR -68 140 9 2151 121 0 0 chr2 75609564 75609869 -175077985 - AluSg SINE Alu -5 305 1 922 251 56 26 chr2 75609872 75609946 -175077908 + MLT1G3 LTR MaLR 1 71 -524 2140 136 144 5 chr2 75609946 75610322 -175077532 - MSTA LTR MaLR 0 428 1 922 251 56 26 chr2 75610322 75610783 -175077071 + MLT1G3 LTR MaLR 71 588 -7 376 354 96 33 chr2 75610833 75611229 -175076625 - L2 LINE L2 -1 3271 2851 391 271 261 16 chr2 75611515 75611825 -175076029 - MLT1L LTR MaLR -35 580 195 297 224 12 82 chr2 75611804 75611889 -175075965 - LTR67 LTR ERVL -402 155 77 * 253 333 46 11 chr2 75611950 75612037 -175075817 - L2 LINE L2 -986 2328 2239 271 222 148 12 chr2 75613255 75613336 -175074518 + MLT1I LTR MaLR 318 409 0 320 328 105 6 chr2 75613382 75613553 -175074301 + MIR SINE MIR 69 256 -6 206 312 111 21 chr2 75614237 75614353 -175073501 + MIR SINE MIR 40 146 -62 219 36 0 0 chr2 75615630 75615658 -175072196 + (TC)n Simple_repeat Simple_repeat 1 28 0 189 147 0 0 chr2 75615658 75615692 -175072162 + (CA)n Simple_repeat Simple_repeat 2 35 0 219 179 60 60 chr2 75616148 75616215 -175071639 - MIR3 SINE MIR -29 179 113 367 198 125 21 chr2 75616257 75616353 -175071501 - MIR SINE MIR -155 107 2 186 349 0 0 chr2 75616376 75616439 -175071415 - MIR SINE MIR -99 109 47 182 167 308 39 chr2 75616630 75616708 -175071146 - MIR3 SINE MIR -104 104 6 213 219 78 31 chr2 75617510 75617574 -175070280 + MIR3 SINE MIR 120 186 -22 229 295 6 114 chr2 75619534 75619700 -175068154 + L2 LINE L2 2951 3098 -174 833 265 19 89 chr2 75619857 75620105 -175067749 - MSTD LTR MaLR 0 396 189 1661 122 22 83 chr2 75620105 75620417 -175067437 - AluSx SINE Alu -11 301 9 833 265 19 89 chr2 75620417 75620594 -175067260 - MSTD LTR MaLR -207 189 1 2416 186 8 49 chr2 75620732 75621264 -175066590 - L1ME1 LINE L1 -7 6159 5650 369 0 0 0 chr2 75621659 75621700 -175066154 + (CA)n Simple_repeat Simple_repeat 1 41 0 477 47 0 0 chr2 75623387 75623451 -175064403 + (TG)n Simple_repeat Simple_repeat 2 65 0 401 276 8 45 chr2 75623453 75623587 -175064267 + MER5B DNA MER1_type 24 152 -26 180 83 0 0 chr2 75623825 75623849 -175064005 - MER5A DNA MER1_type -158 31 8 242 368 0 7 chr2 75624085 75624221 -175063633 + (CCA)n Simple_repeat Simple_repeat 1 135 0 811 147 19 0 chr2 75626393 75626550 -175061304 + CT-rich Low_complexity Low_complexity 3 162 0 2147 98 0 7 chr2 75626552 75626849 -175061005 - AluSx SINE Alu -17 295 1 254 316 102 45 chr2 75627074 75627251 -175060603 - MIR3 SINE MIR -7 201 15 1115 196 79 93 chr2 75628019 75628386 -175059468 - MLT1A1 LTR MaLR -3 362 1 4979 171 23 12 chr2 75629142 75630669 -175057185 + L1MC1 LINE L1 4520 6065 -268 354 276 189 32 chr2 75630678 75630895 -175056959 + HAL1b LINE L1 511 761 -587 1846 146 3 29 chr2 75631009 75631325 -175056529 + AluSq SINE Alu 1 308 -5 565 196 9 0 chr2 75631346 75631458 -175056396 + L1ME3 LINE L1 6049 6161 -1 700 261 10 55 chr2 75631562 75631761 -175056093 - MER91B DNA MER1_type 0 190 1 392 158 13 0 chr2 75632875 75632951 -175054903 + GA-rich Low_complexity Low_complexity 3 79 0 973 159 91 48 chr2 75633072 75633280 -175054574 + MER20 DNA MER1_type 1 217 -2 943 183 92 52 chr2 75633794 75634045 -175053809 - ORSL DNA AcHobo -13 262 2 412 333 163 27 chr2 75634713 75635154 -175052700 + L1M4 LINE L1 2211 2711 -3435 1524 183 35 0 chr2 75635164 75635449 -175052405 + AluJb SINE Alu 1 295 -17 333 68 0 0 chr2 75635449 75635493 -175052361 + (GGGA)n Simple_repeat Simple_repeat 1 44 0 248 255 85 21 chr2 75635594 75635688 -175052166 + MIR3 SINE MIR 106 205 -3 194 254 18 0 chr2 75636438 75636493 -175051361 + L2 LINE L2 3138 3193 -79 351 305 33 93 chr2 75637205 75637356 -175050498 + L2 LINE L2 3129 3270 -2 273 163 12 25 chr2 75637358 75637438 -175050416 + (TGGA)n Simple_repeat Simple_repeat 2 80 0 256 265 281 5 chr2 75637744 75637929 -175049925 + L1M4 LINE L1 3609 3844 -2302 289 153 85 0 chr2 75638021 75638080 -175049774 - MLT1K LTR MaLR 0 588 525 328 188 0 72 chr2 75638089 75638158 -175049696 + L1M4 LINE L1 4142 4205 -1941 245 304 100 37 chr2 75638211 75638510 -175049344 + L1M4 LINE L1 4342 4659 -1487 561 357 171 8 chr2 75639122 75639637 -175048217 - L1 LINE L1 -1481 4665 4067 2982 183 34 12 chr2 75639663 75640304 -175047550 - L1MD2 LINE L1 -3 6356 5702 2399 62 0 10 chr2 75640312 75640621 -175047233 + AluY SINE Alu 1 306 -5 1216 218 37 35 chr2 75640629 75641033 -175046821 - L1MD2 LINE L1 -743 5403 4999 * 2375 219 45 48 chr2 75641021 75641821 -175046033 + L1M4 LINE L1 3905 4702 -1444 257 311 61 47 chr2 75641889 75642037 -175045817 - HAL1b LINE L1 -850 498 349 1247 142 5 15 chr2 75642306 75642510 -175045344 + MER2 DNA MER2_type 9 210 -135 21 0 0 0 chr2 75642524 75642545 -175045309 + AT_rich Low_complexity Low_complexity 1 21 0 701 297 76 88 chr2 75642615 75643140 -175044714 - LTR67 LTR ERVL 0 557 39 419 271 113 23 chr2 75643404 75643581 -175044273 + MLT1H1 LTR MaLR 75 267 -282 569 267 91 5 chr2 75643615 75643825 -175044029 + MLT1H1 LTR MaLR 321 548 -7 668 259 81 125 chr2 75645468 75645578 -175042276 - MLT1H1 LTR MaLR 0 555 442 6947 108 63 17 chr2 75645578 75646237 -175041617 - Tigger3b DNA MER2_type -1798 1230 492 225 0 0 0 chr2 75646237 75646262 -175041592 + (CA)n Simple_repeat Simple_repeat 2 26 0 6947 108 63 17 chr2 75646262 75646777 -175041077 - Tigger3b DNA MER2_type -2536 492 2 668 259 81 125 chr2 75646777 75647279 -175040575 - MLT1H1 LTR MaLR -113 442 3 2053 264 72 65 chr2 75647432 75649002 -175038852 + HAL1 LINE L1 766 2417 -90 367 270 56 8 chr2 75649742 75649868 -175037986 + L2 LINE L2 3141 3272 0 1294 144 0 0 chr2 75649957 75650145 -175037709 + MER5A DNA MER1_type 2 189 0 214 315 245 42 chr2 75650971 75651114 -175036740 + MER91A DNA MER1_type 1 172 -24 216 220 40 0 chr2 75652408 75652458 -175035396 - L2 LINE L2 0 3313 3262 854 247 50 46 chr2 75652484 75652743 -175035111 - MIR SINE MIR 0 262 3 181 240 13 80 chr2 75653045 75653120 -175034734 - L2 LINE L2 -528 2786 2717 482 250 77 36 chr2 75653501 75653669 -175034185 - MIR3 SINE MIR -19 189 15 871 219 32 18 chr2 75654203 75654526 -175033328 - MSTD LTR MaLR 0 396 7 278 289 112 13 chr2 75655474 75655626 -175032228 + MIR3 SINE MIR 21 187 -21 180 111 0 0 chr2 75656825 75656852 -175031002 + (TTCTC)n Simple_repeat Simple_repeat 2 28 0 2272 218 23 18 chr2 75658183 75658696 -175029158 - LTR40a LTR ERVL 0 519 4 182 250 42 21 chr2 75658780 75658828 -175029026 - MER5B DNA MER1_type 0 178 130 1128 250 122 3 chr2 75658953 75659273 -175028581 + LTR16C LTR ERVL 134 491 0 7166 144 9 1 chr2 75659307 75660463 -175027391 - L1PA11 LINE L1 -1123 5023 3859 6489 80 18 12 chr2 75660464 75661578 -175026276 + L1PA11 LINE L1 5029 6174 0 1874 155 41 41 chr2 75662271 75662612 -175025242 + MER7A DNA MER2_type 1 339 -7 439 177 51 0 chr2 75662827 75662906 -175024948 - MIR SINE MIR -57 151 69 390 314 29 35 chr2 75662942 75663114 -175024740 - MIR SINE MIR -3 259 89 966 103 4 0 chr2 75664749 75664983 -175022871 + (TA)n Simple_repeat Simple_repeat 1 235 0 1427 182 0 15 chr2 75665309 75665573 -175022281 + AluJo SINE Alu 31 290 -22 46 45 0 0 chr2 75665573 75665640 -175022214 + AT_rich Low_complexity Low_complexity 1 67 0 315 268 31 21 chr2 75665640 75665737 -175022117 + L1MC4 LINE L1 6595 6692 -1350 291 54 0 0 chr2 75665770 75665807 -175022047 + (CA)n Simple_repeat Simple_repeat 2 38 0 257 267 108 36 chr2 75666076 75666271 -175021583 - L2 LINE L2 -143 3129 2921 2699 85 33 3 chr2 75666339 75666703 -175021151 + THE1C LTR MaLR 1 375 0 447 286 42 106 chr2 75666910 75667267 -175020587 - L2 LINE L2 -2 3270 2937 416 280 91 64 chr2 75667767 75668217 -175019637 + LTR16B LTR ERVL 1 462 -2 241 257 28 83 chr2 75668227 75668371 -175019483 - L1MC5 LINE L1 -93 7868 7733 2311 224 35 4 chr2 75668372 75668863 -175018991 - MER82 DNA MER2_type 0 653 148 43334 33 23 1 chr2 75668864 75674871 -175012983 + L1PA3 LINE L1 13 6155 0 745 206 52 0 chr2 75674876 75675031 -175012823 - MER82 DNA MER2_type -490 163 1 610 281 40 43 chr2 75675055 75675428 -175012426 - L1MC5 LINE L1 -264 7697 7326 1177 250 4 4 chr2 75675586 75675834 -175012020 + MIR SINE MIR 12 259 -3 276 77 0 0 chr2 75676406 75676445 -175011409 + (TCCA)n Simple_repeat Simple_repeat 4 42 0 314 190 139 0 chr2 75678147 75678226 -175009628 + MIR SINE MIR 113 202 -60 182 171 29 0 chr2 75678407 75678442 -175009412 - L2 LINE L2 -83 3189 3154 416 242 199 27 chr2 75678966 75679152 -175008702 - MIR SINE MIR -6 256 39 256 259 0 17 chr2 75679321 75679379 -175008475 - MIR SINE MIR -4 258 202 225 262 0 58 chr2 75679974 75680077 -175007777 + CT-rich Low_complexity Low_complexity 3 99 0 1026 137 0 0 chr2 75680390 75680567 -175007287 + FRAM SINE Alu 1 177 0 559 271 90 0 chr2 75680941 75681096 -175006758 + MIR SINE MIR 21 189 -73 378 244 40 57 chr2 75681216 75681359 -175006495 + MIR3 SINE MIR 30 171 -37 234 91 0 0 chr2 75681442 75681475 -175006379 + (CCCCCG)n Simple_repeat Simple_repeat 4 36 0 2012 106 0 0 chr2 75681573 75681869 -175005985 + AluSg SINE Alu 8 303 0 650 251 54 71 chr2 75683523 75683789 -175004065 + MIR SINE MIR 4 262 0 288 360 35 12 chr2 75683902 75684074 -175003780 - L3b LINE CR1 -120 1463 1288 299 272 68 10 chr2 75684376 75684479 -175003375 + L2 LINE L2 2991 3099 -173 292 243 40 0 chr2 75686104 75686178 -175001676 + L2 LINE L2 3236 3312 -1 209 276 58 35 chr2 75686392 75686479 -175001375 + MIR SINE MIR 60 148 -114 276 268 28 0 chr2 75687207 75687316 -175000538 + MIR3 SINE MIR 92 205 -3 182 371 48 0 chr2 75687488 75687593 -175000261 + MIR SINE MIR 33 142 -66 2078 117 0 19 chr2 75688978 75689285 -174998569 + AluSx SINE Alu 1 301 -11 883 253 198 17 chr2 75690033 75690577 -174997277 - L2 LINE L2 -125 3188 2537 366 298 120 34 chr2 75690720 75690876 -174996978 + L2 LINE L2 1991 2132 -1182 838 177 79 0 chr2 75690876 75691040 -174996814 - MER45A DNA AcHobo 0 178 2 366 298 120 34 chr2 75691040 75691266 -174996588 + L2 LINE L2 2132 2406 -908 517 294 209 28 chr2 75691269 75691704 -174996150 + L1ME LINE L1 2662 3175 -2971 302 350 40 10 chr2 75691725 75691825 -174996029 - L2 LINE L2 -11 3261 3159 1226 333 105 19 chr2 75691826 75691926 -174995928 + L1ME LINE L1 3208 3298 -2848 1919 145 84 29 chr2 75691926 75692271 -174995583 - THE1B LTR MaLR 0 364 1 1226 333 105 19 chr2 75692271 75692914 -174994940 + L1ME LINE L1 3298 4015 -2131 537 55 27 0 chr2 75692916 75692989 -174994865 + Alu SINE Alu 220 294 -15 268 289 96 48 chr2 75693006 75693193 -174994661 + L1P LINE L1 4027 4222 -1924 726 335 185 25 chr2 75693268 75694162 -174993692 + L1ME LINE L1 4306 5342 -804 584 268 16 6 chr2 75694312 75694495 -174993359 + L1ME LINE L1 5599 5783 -338 221 242 32 16 chr2 75694612 75694674 -174993180 - MIR3 SINE MIR -25 183 121 193 200 0 0 chr2 75694673 75694708 -174993146 - L3 LINE CR1 -88 1489 1455 * 242 235 103 0 chr2 75694933 75695001 -174992853 + MIR3 SINE MIR 133 207 -1 * 835 325 52 30 chr2 75694999 75695399 -174992455 - L3 LINE CR1 -238 1339 931 691 235 35 24 chr2 75695426 75695596 -174992258 + MER91B DNA MER1_type 19 190 0 1021 183 23 27 chr2 75695776 75695995 -174991859 - MER20 DNA MER1_type 0 219 2 281 236 101 11 chr2 75696050 75696139 -174991715 + MLT1L LTR MaLR 519 615 0 1276 347 148 13 chr2 75696141 75696855 -174990999 - L3 LINE CR1 -682 895 85 2031 125 7 0 chr2 75697387 75697675 -174990179 + AluJb SINE Alu 21 310 -2 222 191 0 0 chr2 75697680 75697727 -174990127 + A-rich Low_complexity Low_complexity 3 49 0 438 331 8 0 chr2 75698042 75698169 -174989685 + MIR SINE MIR 13 140 -122 602 260 39 7 chr2 75699766 75699920 -174987934 + MIR SINE MIR 34 192 -70 557 263 80 38 chr2 75700900 75701113 -174986741 - L2 LINE L2 0 3313 3092 297 0 0 0 chr2 75701599 75701632 -174986222 + (CA)n Simple_repeat Simple_repeat 2 34 0 480 276 68 62 chr2 75701758 75702096 -174985758 - L1ME LINE L1 -299 6102 5766 1544 234 58 109 chr2 75702231 75702622 -174985232 - L1MEd LINE L1 -2503 3923 3514 315 70 23 0 chr2 75702622 75702665 -174985189 - tRNA-Lys-AAG tRNA tRNA -32 44 1 1544 234 58 109 chr2 75702665 75702983 -174984871 - L1MEd LINE L1 -2912 3514 3181 574 47 24 35 chr2 75702983 75703106 -174984748 + L1PA7 LINE L1 6071 6154 0 2460 77 3 0 chr2 75703116 75703426 -174984428 + AluSp SINE Alu 1 311 -2 1544 234 58 109 chr2 75703426 75704629 -174983225 - L1MEd LINE L1 -3254 3172 2085 373 282 71 37 chr2 75704654 75705084 -174982770 - L1MEd LINE L1 -4894 1532 1053 2794 258 69 5 chr2 75705101 75706403 -174981451 + L1MDa LINE L1 2190 3566 -2974 2146 116 7 16 chr2 75706760 75707070 -174980784 + AluSx SINE Alu 1 307 -5 651 260 88 6 chr2 75707082 75707421 -174980433 + L1MDa LINE L1 3604 3970 -2570 222 283 31 6 chr2 75707421 75707580 -174980274 + (TA)n Simple_repeat Simple_repeat 2 164 0 6489 189 73 72 chr2 75707608 75711486 -174976368 - L1PB3 LINE L1 -7 6863 2792 2582 235 60 26 chr2 75711499 75712411 -174975443 + L1MDa LINE L1 3962 4904 -1636 2556 106 64 7 chr2 75712413 75712818 -174975036 + L1P LINE L1 3 430 -5716 5442 54 0 3 chr2 75712818 75713490 -174974364 + L1PA5 LINE L1 5485 6154 0 516 233 20 7 chr2 75713490 75713636 -174974218 + L1MDa LINE L1 4897 5044 -1496 629 204 46 15 chr2 75713643 75713839 -174974015 + L1MDa LINE L1 5358 5559 -981 352 214 11 0 chr2 75713823 75713912 -174973942 - L1MB5 LINE L1 -30 6144 6055 * 717 215 0 0 chr2 75713922 75714052 -174973802 - FLAM_A SINE Alu -7 135 6 3883 190 16 11 chr2 75714054 75714854 -174973000 - L1MB5 LINE L1 -114 6060 5257 1135 170 36 5 chr2 75714864 75715058 -174972796 - AluJo SINE Alu -26 286 87 808 226 68 0 chr2 75715058 75715324 -174972530 - L1MB5 LINE L1 -919 5227 4944 481 185 84 8 chr2 75715308 75715427 -174972427 + L1MB5 LINE L1 4845 4972 -1174 * 379 287 74 45 chr2 75716302 75716504 -174971350 + MIR SINE MIR 29 236 -26 1230 210 208 9 chr2 75716560 75716983 -174970871 - MLT1J LTR MaLR -1 510 4 744 318 60 18 chr2 75717219 75717618 -174970236 + LTR33 LTR ERVL 1 416 -105 582 268 101 36 chr2 75717870 75718337 -174969517 + L1ME4a LINE L1 5379 5875 -246 337 214 126 10 chr2 75718401 75718504 -174969350 + L1ME4a LINE L1 5995 6109 -12 3349 180 36 3 chr2 75718670 75719313 -174968541 - MER21B LTR ERV1 0 863 200 1177 128 119 4 chr2 75719310 75719537 -174968317 + MER41B LTR ERV1 295 547 -88 * 1060 177 57 10 chr2 75719560 75719769 -174968085 - MER21B LTR ERV1 -644 219 1 2077 215 7 28 chr2 75719934 75720533 -174967321 + L1ME4a LINE L1 4735 5320 -826 362 277 50 10 chr2 75720788 75720990 -174966864 + L1ME4a LINE L1 5724 5933 -188 742 156 47 67 chr2 75721112 75721408 -174966446 - MSTD LTR MaLR 0 396 19 403 259 62 73 chr2 75721982 75722256 -174965598 + MLT1K LTR MaLR 311 581 -7 508 362 6 0 chr2 75722395 75722558 -174965296 + MIR3 SINE MIR 45 208 0 332 369 92 7 chr2 75722552 75722834 -174965020 + L2 LINE L2 2228 2533 -781 * 214 359 109 48 chr2 75723015 75723093 -174964761 + L2 LINE L2 2244 2316 -998 2235 157 56 19 chr2 75723093 75723506 -174964348 - MSTA LTR MaLR 0 428 1 214 359 109 48 chr2 75723506 75723948 -174963906 + L2 LINE L2 2316 2796 -518 2195 135 0 3 chr2 75724084 75724517 -174963337 + AluSg SINE Alu 1 432 0 386 240 55 65 chr2 75725437 75725654 -174962200 - L1ME4a LINE L1 -53 6068 5854 323 326 18 60 chr2 75725684 75725960 -174961894 - L2 LINE L2 -1 3312 2965 304 324 42 66 chr2 75726039 75726326 -174961528 - L2 LINE L2 -442 2872 2593 518 251 230 8 chr2 75726370 75726609 -174961245 + MLT2E LTR ERVL 337 628 0 252 308 126 50 chr2 75726611 75726770 -174961084 + L2 LINE L2 3079 3249 -23 240 59 0 0 chr2 75726782 75726816 -174961038 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 268 258 208 38 chr2 75726816 75727071 -174960783 - L2 LINE L2 -1025 2289 1986 812 167 0 7 chr2 75727074 75727212 -174960642 + FLAM_C SINE Alu 1 137 -6 277 293 26 17 chr2 75727246 75727362 -174960492 - L2 LINE L2 -1393 1921 1805 261 338 103 7 chr2 75727558 75727848 -174960006 + L2 LINE L2 2848 3165 -107 399 303 33 40 chr2 75727888 75728040 -174959814 - L2 LINE L2 -31 3282 3132 504 214 0 0 chr2 75729454 75729566 -174958288 + (CA)n Simple_repeat Simple_repeat 1 112 0 786 303 144 7 chr2 75729788 75730204 -174957650 - LTR16C LTR ERVL -16 475 3 661 305 17 0 chr2 75730523 75730762 -174957092 - L2 LINE L2 -931 2383 2141 591 251 39 39 chr2 75731013 75731216 -174956638 + MIR SINE MIR 22 224 -38 721 272 71 46 chr2 75731797 75732640 -174955214 + L1MEd LINE L1 755 1652 -4658 362 257 48 62 chr2 75733085 75733295 -174954559 + L1MEd LINE L1 2116 2322 -3807 292 354 23 8 chr2 75733343 75733473 -174954381 - L3 LINE CR1 -606 971 840 1900 214 68 32 chr2 75733478 75734048 -174953806 - L1ME2 LINE L1 -9 6155 5565 1178 216 97 22 chr2 75734048 75734367 -174953487 + MER2 DNA MER2_type 2 344 0 1056 214 104 26 chr2 75734398 75734819 -174953035 - L1ME2 LINE L1 -831 5315 4862 814 283 46 65 chr2 75734841 75735209 -174952645 + MLT1J LTR MaLR 100 460 -51 202 256 24 37 chr2 75735258 75735340 -174952514 + L2 LINE L2 3168 3248 -65 1013 337 156 36 chr2 75735410 75735673 -174952181 + L3 LINE CR1 479 709 -868 2162 163 31 100 chr2 75735673 75736212 -174951642 + MLT1D LTR MaLR 3 504 -1 1013 337 156 36 chr2 75736212 75736835 -174951019 + L3 LINE CR1 709 1471 -106 390 319 0 22 chr2 75738661 75738796 -174949058 - MIR3 SINE MIR -71 137 6 446 247 13 0 chr2 75738807 75738957 -174948897 + (ATGGTG)n Simple_repeat Simple_repeat 5 156 0 369 248 30 0 chr2 75739808 75739908 -174947946 + MIR SINE MIR 51 154 -62 1631 238 52 97 chr2 75739957 75740731 -174947123 + MER21B LTR ERV1 1 739 -124 25 0 0 0 chr2 75740921 75740946 -174946908 + AT_rich Low_complexity Low_complexity 1 25 0 211 313 92 8 chr2 75742140 75742271 -174945583 + L2 LINE L2 1745 1886 -1428 349 105 29 181 chr2 75742338 75742443 -174945411 + MER53 DNA DNA 101 189 0 186 325 73 49 chr2 75742833 75742956 -174944898 - MIR3 SINE MIR -39 169 44 327 85 0 0 chr2 75744085 75744132 -174943722 + (TATTG)n Simple_repeat Simple_repeat 2 48 0 2091 112 0 7 chr2 75744132 75744417 -174943437 - AluSx SINE Alu -27 285 3 21 0 0 0 chr2 75746767 75746788 -174941066 + AT_rich Low_complexity Low_complexity 1 21 0 1085 190 0 0 chr2 75747131 75747305 -174940549 + FAM SINE Alu 1 174 -1 415 208 0 13 chr2 75747497 75747574 -174940280 + Tigger7 DNA MER2_type 2 77 -656 1264 198 38 30 chr2 75747575 75747838 -174940016 - Tigger7 DNA MER2_type -2141 346 82 * 1831 138 25 28 chr2 75747832 75748074 -174939780 + Tigger7 DNA MER2_type 2163 2405 -82 1048 158 73 163 chr2 75748074 75748155 -174939699 + MER7A DNA MER2_type 2 89 -2949 1857 160 7 3 chr2 75748155 75748448 -174939406 + AluSx SINE Alu 1 294 -18 1048 158 73 163 chr2 75748448 75748747 -174939107 + MER7A DNA MER2_type 89 346 0 1831 138 25 28 chr2 75748747 75748830 -174939024 + Tigger7 DNA MER2_type 2405 2487 0 205 263 0 81 chr2 75748887 75748986 -174938868 - MIR SINE MIR -4 258 168 503 310 38 43 chr2 75749021 75749205 -174938649 - MIR3 SINE MIR -3 205 23 411 305 102 20 chr2 75749236 75749433 -174938421 - MIR SINE MIR -48 214 2 365 308 19 19 chr2 75749707 75749811 -174938043 - L2 LINE L2 0 3313 3210 1312 201 15 114 chr2 75749918 75750320 -174937534 + MLT1A1 LTR MaLR 4 365 0 2058 158 75 6 chr2 75750479 75750839 -174937015 + MSTB LTR MaLR 8 392 -34 1861 181 0 0 chr2 75750840 75751132 -174936722 - AluSx SINE Alu -18 294 3 880 85 0 0 chr2 75751581 75751699 -174936155 + AluY SINE Alu 187 304 -7 436 341 59 16 chr2 75752531 75752879 -174934975 + ERVL LTR ERVL 1918 2307 -3457 29 0 0 0 chr2 75753204 75753233 -174934621 + AT_rich Low_complexity Low_complexity 1 29 0 264 275 92 58 chr2 75753244 75753364 -174934490 - MIR SINE MIR -43 219 96 251 245 252 34 chr2 75753409 75753556 -174934298 + L2 LINE L2 2587 2765 -549 270 0 0 0 chr2 75754345 75754375 -174933479 + (ATG)n Simple_repeat Simple_repeat 3 32 0 469 322 87 21 chr2 75754391 75754633 -174933221 - MIR SINE MIR -2 260 3 435 375 134 0 chr2 75755260 75755476 -174932378 + L2 LINE L2 267 511 -2803 375 284 103 34 chr2 75755605 75755809 -174932045 + MLT1L LTR MaLR 14 231 -384 316 218 82 18 chr2 75755891 75756001 -174931853 + L1ME4a LINE L1 6003 6119 -2 4215 272 67 40 chr2 75756032 75758191 -174929663 + L1MEc LINE L1 39 2256 -4140 3641 171 11 110 chr2 75758193 75758916 -174928938 + L1M1 LINE L1 16 638 -6927 17073 40 14 0 chr2 75758916 75761754 -174926100 + L1PA5 LINE L1 3292 6146 -8 3641 171 11 110 chr2 75761754 75761915 -174925939 + L1M1 LINE L1 638 813 -6752 8097 203 62 3 chr2 75761918 75763316 -174924538 + L1M1 LINE L1 4877 6191 -1533 1909 118 4 0 chr2 75763316 75763579 -174924275 + AluY SINE Alu 3 266 -45 8097 203 62 3 chr2 75763579 75763679 -174924175 + L1M1 LINE L1 6191 6284 -1440 1936 104 50 14 chr2 75763679 75763958 -174923896 - AluSx SINE Alu -23 289 1 8097 203 62 3 chr2 75763958 75764449 -174923405 + L1M1 LINE L1 6284 6993 -731 417 155 21 11 chr2 75764450 75764683 -174923171 + AluSg SINE Alu 6 292 -10 4356 104 31 32 chr2 75764696 75765439 -174922415 + L1MA2 LINE L1 5563 6304 0 2852 236 47 21 chr2 75765440 75766424 -174921430 + L1MEc LINE L1 2209 3217 -2998 823 230 113 44 chr2 75766424 75766771 -174921083 - MLT1G LTR MaLR -242 353 7 1010 271 33 28 chr2 75766775 75767235 -174920619 - L1MEc LINE L1 -4620 1764 1324 326 228 29 50 chr2 75767283 75767424 -174920430 - L1MEc LINE L1 -5361 919 786 5261 159 30 11 chr2 75767571 75768566 -174919288 + L1MA8 LINE L1 5254 6267 -24 498 342 33 50 chr2 75768762 75769221 -174918633 - L1MEc LINE L1 -5918 645 195 337 310 139 11 chr2 75769726 75769913 -174917941 + MLT1L LTR MaLR 401 611 -4 2164 75 21 3 chr2 75770961 75771243 -174916611 + AluY SINE Alu 1 287 -24 192 77 0 0 chr2 75771243 75771269 -174916585 + (GGGGA)n Simple_repeat Simple_repeat 4 29 0 374 273 62 10 chr2 75771771 75771980 -174915874 - L1ME3A LINE L1 -218 5952 5733 2974 181 27 19 chr2 75772898 75773537 -174914317 - L1P LINE L1 -1255 4891 4248 5388 132 9 7 chr2 75773537 75774770 -174913084 + L1PA15 LINE L1 4931 6165 0 7675 163 15 9 chr2 75774852 75776765 -174911089 + L1MA9 LINE L1 3872 5793 -498 2780 198 10 0 chr2 75776801 75777296 -174910558 + MST-int LTR MaLR 417 916 -735 663 200 0 38 chr2 75777305 75777465 -174910389 + L1MA9 LINE L1 6121 6274 -38 289 202 67 11 chr2 75777472 75777561 -174910293 - L1ME2 LINE L1 -232 6001 5908 * 4412 269 79 67 chr2 75777557 75778581 -174909273 - L1ME2 LINE L1 -2060 4155 3144 1036 159 55 64 chr2 75778581 75778801 -174909053 + MER20 DNA MER1_type 2 219 0 4412 269 79 67 chr2 75778801 75780599 -174907255 - L1ME2 LINE L1 -3071 3144 1204 746 105 0 0 chr2 75780599 75780704 -174907150 + AluSg/x SINE Alu 190 294 -15 4412 269 79 67 chr2 75780704 75781879 -174905975 - L1ME2 LINE L1 -5011 1204 44 698 284 45 46 chr2 75781882 75782334 -174905520 - L1MEc LINE L1 -4729 2357 1767 609 222 9 0 chr2 75782365 75782473 -174905381 + FLAM_A SINE Alu 1 109 -33 268 298 0 33 chr2 75782475 75782596 -174905258 - L1MEc LINE L1 -5058 1873 1757 290 305 52 11 chr2 75783050 75783224 -174904630 - L1MEc LINE L1 -4899 1524 1344 231 257 20 30 chr2 75783315 75783416 -174904438 - L1MEc LINE L1 -5655 1467 1368 183 42 0 0 chr2 75783674 75783698 -174904156 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2166 109 7 7 chr2 75783704 75783998 -174903856 - AluSg SINE Alu -16 294 1 192 179 0 0 chr2 75785658 75785697 -174902157 + A-rich Low_complexity Low_complexity 1 39 0 496 292 69 26 chr2 75786277 75786510 -174901344 + MIR SINE MIR 20 262 0 274 262 12 36 chr2 75787761 75787845 -174900009 + MLT1J LTR MaLR 228 309 -202 2191 96 4 4 chr2 75787944 75788265 -174899589 + AluSc SINE Alu 2 322 0 1165 260 40 67 chr2 75788594 75788998 -174898856 + MLT2B1 LTR ERVL 1 393 -127 2184 122 0 0 chr2 75789022 75789318 -174898536 + AluSx SINE Alu 4 299 -13 333 0 0 0 chr2 75789332 75789369 -174898485 + (CA)n Simple_repeat Simple_repeat 2 38 0 6864 182 40 27 chr2 75789549 75791698 -174896156 + L1PB4 LINE L1 3614 5791 -365 624 168 8 8 chr2 75791771 75791788 -174896066 + L1PB4 LINE L1 5770 5786 -370 2213 118 0 3 chr2 75791788 75792092 -174895762 + AluSq SINE Alu 1 303 -10 624 168 8 8 chr2 75792092 75792205 -174895649 + L1PB4 LINE L1 5785 5900 -256 394 311 92 12 chr2 75792213 75792377 -174895477 + L1MEc LINE L1 1381 1557 -4839 966 227 42 11 chr2 75792444 75792704 -174895150 - L1M4 LINE L1 -2500 4144 3877 1151 214 48 49 chr2 75792760 75793386 -174894468 - L1M4 LINE L1 -4466 2180 817 377 287 37 9 chr2 75793499 75793607 -174894247 - L1M4 LINE L1 -5824 718 608 1533 158 16 79 chr2 75793834 75794150 -174893704 + AluJo SINE Alu 1 296 -16 34977 44 2 2 chr2 75794160 75800299 -174887555 + L1PA4 LINE L1 8 6144 -11 387 298 49 10 chr2 75800415 75800620 -174887234 - L1M4 LINE L1 -6315 227 15 23 78 0 0 chr2 75801153 75801204 -174886650 + AT_rich Low_complexity Low_complexity 1 51 0 1867 164 0 10 chr2 75801361 75801665 -174886189 + AluJb SINE Alu 6 306 -6 613 297 140 52 chr2 75801680 75802586 -174885268 + L1MEd LINE L1 81 1066 -5053 327 285 157 35 chr2 75802600 75802772 -174885082 + HAL1 LINE L1 1451 1643 -864 180 377 48 34 chr2 75802859 75803005 -174884849 - L3 LINE CR1 -1 1576 1429 228 345 60 72 chr2 75803064 75803299 -174884555 - L3 LINE CR1 -305 1272 1041 226 73 49 0 chr2 75803326 75803367 -174884487 + CT-rich Low_complexity Low_complexity 2 44 0 2458 56 0 10 chr2 75803387 75803689 -174884165 - AluY SINE Alu -12 299 1 320 242 0 0 chr2 75803689 75803751 -174884103 - MER5A DNA MER1_type 0 189 128 595 170 0 106 chr2 75803861 75803884 -174883970 - FLAM_A SINE Alu -175 127 103 2195 112 10 0 chr2 75803884 75804178 -174883676 + AluSc SINE Alu 1 297 -12 595 170 0 106 chr2 75804178 75804295 -174883559 - FLAM_A SINE Alu -199 103 2 303 270 0 14 chr2 75804295 75804365 -174883489 - MER5A DNA MER1_type -113 76 8 * 347 338 8 8 chr2 75804326 75804459 -174883395 - L3 LINE CR1 -558 1019 887 329 127 55 0 chr2 75805380 75805435 -174882419 - AluJb SINE Alu -169 133 76 845 257 183 6 chr2 75806408 75806746 -174881108 - MLT1I LTR MaLR -2 407 10 266 135 0 0 chr2 75807349 75807386 -174880468 + LOR1a LTR ERV1 461 497 0 288 247 41 0 chr2 75807561 75807658 -174880196 - MLT1I LTR MaLR -2 407 307 1361 106 157 17 chr2 75807686 75807921 -174879933 - AluSg1 SINE Alu -41 268 1 376 341 47 32 chr2 75808156 75808496 -174879358 - L1M4 LINE L1 -3692 2454 2110 684 163 27 7 chr2 75808694 75808841 -174879013 - L1MB3 LINE L1 -76 6107 5958 * 7737 185 22 13 chr2 75808836 75810702 -174877152 - L1M4 LINE L1 -3558 2824 940 6922 64 0 4 chr2 75810702 75811704 -174876150 - L1PA7 LINE L1 -1 6153 5156 6508 122 107 134 chr2 75812111 75813856 -174873998 + pTR5 LTR ERV1 741 2438 0 26 50 0 0 chr2 75813915 75813955 -174873899 + AT_rich Low_complexity Low_complexity 1 40 0 260 301 58 26 chr2 75813999 75814155 -174873699 - L1M4 LINE L1 -1910 4236 4076 267 203 0 0 chr2 75814203 75814262 -174873592 + (CA)n Simple_repeat Simple_repeat 1 59 0 271 271 80 40 chr2 75814393 75814618 -174873236 - L1 LINE L1 -2326 3820 3587 304 294 98 38 chr2 75814766 75814950 -174872904 - L1 LINE L1 -2694 3452 3258 1935 63 0 0 chr2 75815299 75815551 -174872303 - L1PA13 LINE L1 -1 6162 5911 332 238 175 35 chr2 75815788 75815931 -174871923 - MER104 DNA Tc2 -15 165 3 389 283 55 97 chr2 75815936 75816244 -174871610 - HAL1b LINE L1 -418 930 636 287 234 13 13 chr2 75817279 75817356 -174870498 + MER52A LTR ERV1 1 77 -1678 6315 215 52 34 chr2 75817539 75819210 -174868644 + MER52A LTR ERV1 55 1755 0 251 307 80 7 chr2 75819970 75820085 -174867769 - MARNA DNA Mariner -150 436 306 1140 206 5 9 chr2 75820085 75820304 -174867550 + MER20 DNA MER1_type 2 219 0 251 307 80 7 chr2 75820304 75820338 -174867516 - MARNA DNA Mariner -280 306 276 222 298 0 0 chr2 75820344 75820401 -174867453 + L2 LINE L2 3257 3313 0 1863 147 3 39 chr2 75820821 75821127 -174866727 + AluSx SINE Alu 1 295 -17 1060 220 92 11 chr2 75821782 75821953 -174865901 - AluJo SINE Alu -6 296 93 594 0 0 0 chr2 75821953 75822019 -174865835 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 1060 220 92 11 chr2 75822019 75822120 -174865734 - AluJo SINE Alu -209 93 2 30865 104 13 11 chr2 75822124 75822505 -174865349 - L1PA7 LINE L1 0 6469 6090 1873 118 15 4 chr2 75822505 75822777 -174865077 - AluSq SINE Alu 0 313 39 30865 104 13 11 chr2 75822777 75828142 -174859712 - L1PA7 LINE L1 -379 6090 706 26 0 0 0 chr2 75828342 75828368 -174859486 + AT_rich Low_complexity Low_complexity 1 26 0 199 273 39 65 chr2 75828487 75828564 -174859290 + L2 LINE L2 3235 3309 -4 1415 203 7 52 chr2 75828810 75829116 -174858738 + AluJo SINE Alu 1 292 -20 402 262 107 7 chr2 75829504 75829653 -174858201 + MIR SINE MIR 57 220 -42 3535 204 47 21 chr2 75829727 75830740 -174857114 - L1PA12 LINE L1 -4509 3065 1504 2401 210 40 8 chr2 75830730 75831259 -174856595 + L1P LINE L1 1688 2233 -3913 * 1508 96 57 5 chr2 75831359 75831568 -174856286 - AluY SINE Alu -91 220 1 305 276 95 9 chr2 75831896 75832001 -174855853 - L3 LINE CR1 -3 1574 1461 315 0 0 0 chr2 75833751 75833786 -174854068 + (TG)n Simple_repeat Simple_repeat 2 36 0 226 350 102 28 chr2 75834616 75834793 -174853061 - L2 LINE L2 -212 3060 2871 189 387 34 17 chr2 75835179 75835298 -174852556 + MIR SINE MIR 20 140 -122 25 0 0 0 chr2 75835545 75835570 -174852284 + AT_rich Low_complexity Low_complexity 1 25 0 1838 137 108 15 chr2 75835906 75836249 -174851605 - THE1C LTR MaLR 0 375 1 1533 207 10 7 chr2 75836320 75836644 -174851210 + AluJb SINE Alu 3 312 0 301 271 81 119 chr2 75837623 75837833 -174850021 + MIR SINE MIR 5 206 -56 222 150 0 0 chr2 75837916 75837956 -174849898 + (GA)n Simple_repeat Simple_repeat 2 41 0 215 309 0 0 chr2 75837958 75838013 -174849841 + MIR SINE MIR 208 262 0 346 299 77 51 chr2 75838025 75838259 -174849595 + MIR SINE MIR 1 240 -22 201 362 95 9 chr2 75838511 75838616 -174849238 - L2 LINE L2 -8 3264 3151 381 259 40 81 chr2 75838680 75838854 -174849000 + MIR SINE MIR 52 218 -44 21 36 0 0 chr2 75840987 75841015 -174846839 + AT_rich Low_complexity Low_complexity 1 28 0 12942 25 2 0 chr2 75841167 75843466 -174844388 + L1PA3 LINE L1 3855 6155 0 21 71 0 0 chr2 75843514 75843556 -174844298 + AT_rich Low_complexity Low_complexity 1 42 0 29 47 0 0 chr2 75843589 75843632 -174844222 + AT_rich Low_complexity Low_complexity 1 43 0 461 317 30 35 chr2 75843633 75843971 -174843883 - L1ME LINE L1 -318 5803 5468 1190 183 72 103 chr2 75844488 75844865 -174842989 + MLT1A1 LTR MaLR 1 365 0 428 310 58 21 chr2 75845150 75845392 -174842462 - L1ME LINE L1 -2265 3881 3631 1823 163 30 39 chr2 75845873 75846236 -174841618 - MLT1A1 LTR MaLR 0 365 6 414 319 73 32 chr2 75846603 75846945 -174840909 + L1ME LINE L1 533 888 -5182 240 146 24 0 chr2 75847702 75847743 -174840111 - MER103 DNA DNA -55 111 70 287 352 99 13 chr2 75847800 75848033 -174839821 + L2 LINE L2 1839 2091 -1223 2407 97 0 0 chr2 75848164 75848474 -174839380 + AluSx SINE Alu 3 312 0 5625 154 35 18 chr2 75848750 75848845 -174839009 - L1MA8 LINE L1 -7 6284 6192 361 62 231 15 chr2 75848845 75848910 -174838944 + MADE1 DNA Mariner 2 80 0 5625 154 35 18 chr2 75848910 75849865 -174837989 - L1MA8 LINE L1 -99 6192 5192 2205 124 0 0 chr2 75849865 75850171 -174837683 - AluSx SINE Alu -6 306 1 5625 154 35 18 chr2 75850171 75850935 -174836919 - L1MA8 LINE L1 -1099 5192 4442 1256 202 60 3 chr2 75851035 75851352 -174836502 - L1MC2 LINE L1 -10 6334 6000 1261 234 109 19 chr2 75851354 75851876 -174835978 - L1ME LINE L1 -2960 3186 2618 12698 208 36 19 chr2 75852132 75852571 -174835283 - L1 LINE L1 -1447 5401 4971 7414 29 10 0 chr2 75852571 75853702 -174834152 - L1PA4 LINE L1 -1 6154 5016 12698 208 36 19 chr2 75853702 75858571 -174829283 - L1 LINE L1 -1877 4971 1 183 189 27 27 chr2 75858700 75858774 -174829080 + CT-rich Low_complexity Low_complexity 3 76 0 1669 302 119 23 chr2 75859121 75860154 -174827700 + L2 LINE L2 2094 3311 -2 1929 166 0 3 chr2 75862021 75862317 -174825537 + AluSx SINE Alu 1 295 -17 2417 99 21 21 chr2 75863026 75863400 -174824454 + THE1C LTR MaLR 1 374 -1 385 321 61 30 chr2 75863694 75863859 -174823995 + MIR SINE MIR 20 189 -73 4432 60 8 61 chr2 75866246 75866377 -174821477 - L1PA8A LINE L1 0 6131 5995 2527 39 0 29 chr2 75866377 75866689 -174821165 + AluY SINE Alu 1 303 -8 4432 60 8 61 chr2 75866689 75867210 -174820644 - L1PA8A LINE L1 -136 5995 5514 1808 272 69 35 chr2 75868145 75868188 -174819666 + L2 LINE L2 1155 1195 -2119 2273 114 3 0 chr2 75868188 75868494 -174819360 + AluSx SINE Alu 1 307 -5 1808 272 69 35 chr2 75868494 75869105 -174818749 + L2 LINE L2 1195 1831 -1483 2978 175 72 43 chr2 75869120 75869444 -174818410 - L1MC3 LINE L1 -9 7776 7463 2046 109 4 0 chr2 75869444 75869760 -174818094 - AluSg SINE Alu 0 322 6 2978 175 72 43 chr2 75869760 75870127 -174817727 - L1MC3 LINE L1 -322 7463 7064 3225 270 107 21 chr2 75870127 75871458 -174816396 + L2 LINE L2 1823 3280 -33 675 203 208 24 chr2 75871594 75871806 -174816048 - MIR SINE MIR 0 262 12 371 329 121 38 chr2 75872297 75872537 -174815317 + MIR SINE MIR 2 261 -1 206 294 0 0 chr2 75873291 75873342 -174814512 + MIR3 SINE MIR 133 183 -25 21 36 0 0 chr2 75874229 75874257 -174813597 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 75874617 75874639 -174813215 + AT_rich Low_complexity Low_complexity 1 22 0 580 274 73 54 chr2 75874681 75875203 -174812651 - L1MCa LINE L1 -4712 2410 1783 * 602 286 58 42 chr2 75875189 75875500 -174812354 - L1MCa LINE L1 -6089 334 19 554 158 0 35 chr2 75875766 75875880 -174811974 + L1PA14 LINE L1 2305 2414 -3732 832 217 30 0 chr2 75875894 75876092 -174811762 - L1PA15-16 LINE L1 -4041 2808 2605 10050 171 17 17 chr2 75876119 75877963 -174809891 + L1PA14 LINE L1 2945 4791 -1355 2330 92 13 0 chr2 75877963 75878269 -174809585 + AluSg SINE Alu 1 310 0 10050 171 17 17 chr2 75878269 75878451 -174809403 + L1PA14 LINE L1 4790 4971 -1175 2436 120 28 8 chr2 75878454 75878811 -174809043 - THE1B LTR MaLR 0 364 1 11323 100 9 1 chr2 75878811 75880379 -174807475 - THE1B-int LTR MaLR 0 1580 1 2112 126 66 20 chr2 75880379 75880727 -174807127 - THE1B LTR MaLR 0 364 1 3067 106 30 4 chr2 75880727 75881188 -174806666 + L1PA14 LINE L1 5307 5779 -382 863 125 0 0 chr2 75881190 75881318 -174806536 + AluSp/q SINE Alu 176 303 -10 2527 99 13 13 chr2 75881319 75881712 -174806142 + L1PA14 LINE L1 5769 6161 0 2084 103 31 14 chr2 75881747 75882038 -174805816 + AluSc SINE Alu 1 296 -13 316 361 41 33 chr2 75882149 75882271 -174805583 + L2 LINE L2 3141 3263 -9 458 371 71 25 chr2 75882412 75882692 -174805162 - L3 LINE CR1 -431 1146 854 194 369 78 19 chr2 75882782 75883050 -174804804 + L2 LINE L2 2566 2849 -465 1016 65 0 0 chr2 75884107 75884231 -174803623 - AluY SINE Alu -18 293 170 26 0 0 0 chr2 75884680 75884706 -174803148 + AT_rich Low_complexity Low_complexity 1 26 0 853 153 0 8 chr2 75885634 75885765 -174802089 - FLAM_C SINE Alu -3 130 1 1201 251 68 13 chr2 75886331 75886714 -174801140 + L1ME1 LINE L1 5732 6135 -31 873 204 6 0 chr2 75887639 75887801 -174800053 - AluJo SINE Alu -149 163 1 25 0 0 0 chr2 75888138 75888163 -174799691 + AT_rich Low_complexity Low_complexity 1 25 0 2172 127 0 3 chr2 75889759 75890058 -174797796 - AluSx SINE Alu -12 300 3 1256 242 17 20 chr2 75890063 75890361 -174797493 - AluJo SINE Alu -13 299 3 24 0 0 0 chr2 75890553 75890577 -174797277 + AT_rich Low_complexity Low_complexity 1 24 0 271 293 80 25 chr2 75890721 75891247 -174796607 + L1M4 LINE L1 2851 3405 -2741 375 263 32 45 chr2 75891305 75891461 -174796393 - L1M4 LINE L1 -3531 2615 2462 1891 182 109 5 chr2 75891681 75892065 -174795789 + MSTB LTR MaLR 1 424 -2 232 135 39 0 chr2 75892240 75892292 -174795562 + A-rich Low_complexity Low_complexity 3 56 0 1806 171 0 10 chr2 75892293 75892592 -174795262 - AluJo SINE Alu -16 296 1 1765 191 0 0 chr2 75892795 75893098 -174794756 + AluSx SINE Alu 1 303 -9 369 318 63 59 chr2 75893206 75893461 -174794393 - HAL1 LINE L1 -1137 1370 1115 3985 167 21 4 chr2 75893665 75894408 -174793446 - L1MC2 LINE L1 -118 6209 5454 1658 202 0 0 chr2 75894435 75894737 -174793117 - AluJb SINE Alu -10 302 1 460 217 12 0 chr2 75894737 75894860 -174792994 - L1MC2 LINE L1 -844 5285 5159 460 260 47 0 chr2 75895256 75895383 -174792471 - L1MC2 LINE L1 -1530 4599 4467 505 304 48 35 chr2 75895461 75895833 -174792021 - L1MC2 LINE L1 -2143 3986 3610 315 339 139 43 chr2 75896011 75896356 -174791498 - L1MC2 LINE L1 -5738 381 4 230 263 84 21 chr2 75896573 75896668 -174791186 - L1M4 LINE L1 -2289 3857 3757 646 193 62 107 chr2 75897045 75897200 -174790654 - L1MB8 LINE L1 0 6178 6036 449 48 0 0 chr2 75897200 75897262 -174790592 + L1PA10 LINE L1 6103 6164 -4 646 193 62 107 chr2 75897262 75897349 -174790505 - L1MB8 LINE L1 -142 6036 5947 198 0 0 0 chr2 75897839 75897861 -174789993 + (A)n Simple_repeat Simple_repeat 1 22 0 2107 131 3 6 chr2 75898165 75898477 -174789377 + AluSx SINE Alu 1 311 -1 1438 235 28 43 chr2 75898645 75899037 -174788817 + MLT1B LTR MaLR 5 390 0 24 32 0 0 chr2 75899359 75899390 -174788464 + AT_rich Low_complexity Low_complexity 1 31 0 2052 121 0 0 chr2 75899490 75899809 -174788045 - AluSx SINE Alu 0 319 1 338 344 32 41 chr2 75899914 75900228 -174787626 + L1MC/D LINE L1 5508 5818 -303 22 56 0 0 chr2 75900286 75900322 -174787532 + AT_rich Low_complexity Low_complexity 1 36 0 613 347 119 31 chr2 75900888 75901528 -174786326 + L2 LINE L2 2273 2968 -346 186 250 0 83 chr2 75901544 75901604 -174786250 - L2 LINE L2 -836 2478 2424 356 267 161 25 chr2 75901802 75901963 -174785891 + L2 LINE L2 3074 3256 -57 1251 20 0 0 chr2 75901990 75902136 -174785718 + (GGAA)n Simple_repeat Simple_repeat 1 146 0 919 286 15 34 chr2 75902334 75902600 -174785254 + MIR SINE MIR 2 262 0 1158 199 14 14 chr2 75903759 75903980 -174783874 + MER58A DNA MER1_type 4 224 0 303 96 0 0 chr2 75904252 75904304 -174783550 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 389 241 117 48 chr2 75904422 75904567 -174783287 + MIR SINE MIR 98 252 -10 333 47 0 0 chr2 75904616 75904659 -174783195 + (CA)n Simple_repeat Simple_repeat 2 44 0 1533 247 58 22 chr2 75905420 75905866 -174781988 + MLT1C LTR MaLR 6 467 0 2127 117 17 0 chr2 75905917 75906216 -174781638 - AluSc SINE Alu -5 304 1 411 174 103 190 chr2 75906283 75906536 -174781318 + MIR SINE MIR 13 243 -19 1313 213 118 0 chr2 75906757 75907062 -174780792 - MER58B DNA MER1_type 0 341 1 241 383 96 33 chr2 75908063 75908159 -174779695 - L2 LINE L2 -90 3182 3093 333 0 0 0 chr2 75908159 75908196 -174779658 + (TG)n Simple_repeat Simple_repeat 1 37 0 241 383 96 33 chr2 75908196 75908433 -174779421 - L2 LINE L2 -179 3093 2828 206 303 77 26 chr2 75908535 75908690 -174779164 - L2 LINE L2 -755 2559 2397 3422 186 6 53 chr2 75908716 75909390 -174778464 - MER82 DNA MER2_type -10 643 2 561 255 156 41 chr2 75909661 75909904 -174777950 + L2 LINE L2 3024 3294 -19 23 33 0 0 chr2 75909917 75909947 -174777907 + AT_rich Low_complexity Low_complexity 1 30 0 1278 183 35 123 chr2 75910675 75911075 -174776779 + MLT1A1 LTR MaLR 1 365 0 2245 83 0 7 chr2 75911381 75911671 -174776183 - AluSc SINE Alu -21 288 1 29 0 0 0 chr2 75911923 75911952 -174775902 + AT_rich Low_complexity Low_complexity 1 29 0 2490 45 0 10 chr2 75913172 75913481 -174774373 + AluY SINE Alu 1 306 -5 189 0 0 0 chr2 75913826 75913847 -174774007 + (A)n Simple_repeat Simple_repeat 1 21 0 419 106 0 0 chr2 75914189 75914255 -174773599 + L1PA13 LINE L1 6095 6160 -3 1315 106 0 0 chr2 75914255 75914442 -174773412 + L1MA1 LINE L1 6114 6302 0 21 0 0 0 chr2 75914923 75914944 -174772910 + AT_rich Low_complexity Low_complexity 1 21 0 1040 205 24 101 chr2 75916505 75916881 -174770973 - L1MD1 LINE L1 -1 6635 6289 629 125 0 0 chr2 75916862 75916958 -174770896 - L1MA1 LINE L1 -97 6205 6110 * 7732 229 75 44 chr2 75916972 75919309 -174768545 - L1MD1 LINE L1 -334 6302 3779 852 146 0 0 chr2 75919309 75919439 -174768415 - FLAM_C SINE Alu -3 130 1 7732 229 75 44 chr2 75919439 75921106 -174766748 - L1MD1 LINE L1 -2857 3779 2165 652 262 38 0 chr2 75921124 75921307 -174766547 + L1ME2 LINE L1 2646 2835 -3311 448 228 151 58 chr2 75921312 75921380 -174766474 + L1ME2 LINE L1 5639 5699 -465 2311 96 0 6 chr2 75921380 75921692 -174766162 + AluSg SINE Alu 1 310 0 448 228 151 58 chr2 75921692 75921829 -174766025 + L1ME2 LINE L1 5699 5863 -301 307 256 151 66 chr2 75921890 75922195 -174765659 + L1ME LINE L1 5349 5679 -442 2337 76 0 13 chr2 75922204 75922518 -174765336 + AluSg SINE Alu 1 310 0 2096 114 14 3 chr2 75925267 75925564 -174762290 + AluSp SINE Alu 1 300 -13 292 258 66 39 chr2 75926519 75926701 -174761153 - L1M4 LINE L1 -1549 4597 4411 1550 133 6 98 chr2 75926998 75927315 -174760539 + AluJb SINE Alu 1 288 -24 1532 142 68 36 chr2 75927650 75927931 -174759923 - AluJo SINE Alu -14 298 9 1113 176 105 46 chr2 75928008 75928314 -174759540 - MER33 DNA MER1_type 0 324 1 220 236 0 36 chr2 75928366 75928421 -174759433 + L2 LINE L2 3261 3313 0 201 195 0 0 chr2 75929407 75929448 -174758406 + (TG)n Simple_repeat Simple_repeat 2 42 0 4351 20 4 0 chr2 75929473 75929980 -174757874 - L1PA3 LINE L1 0 6155 5647 910 228 83 35 chr2 75929987 75930325 -174757529 - L1MC4 LINE L1 0 8042 7689 700 297 57 0 chr2 75930359 75930568 -174757286 + MER58A DNA MER1_type 1 221 -3 393 195 35 0 chr2 75930581 75930668 -174757186 - L1MC4 LINE L1 -390 7652 7563 2704 79 3 6 chr2 75930668 75931024 -174756830 + THE1A LTR MaLR 1 355 0 281 194 0 14 chr2 75931040 75931112 -174756742 + CT-rich Low_complexity Low_complexity 2 72 0 212 333 0 25 chr2 75931455 75931536 -174756318 - MIR SINE MIR -36 226 148 722 168 0 0 chr2 75931537 75931650 -174756204 - FLAM_C SINE Alu -30 113 1 210 143 0 0 chr2 75931861 75931903 -174755951 - L2 LINE L2 0 3313 3272 319 340 125 42 chr2 75932748 75933036 -174754818 - L2 LINE L2 -339 2975 2664 22 0 0 0 chr2 75934752 75934774 -174753080 + AT_rich Low_complexity Low_complexity 1 22 0 2011 116 25 0 chr2 75935843 75936127 -174751727 + AluSx SINE Alu 1 291 -21 230 246 0 0 chr2 75937030 75937091 -174750763 - L1ME3A LINE L1 -1 6169 6109 337 282 77 51 chr2 75938337 75938454 -174749400 - L2 LINE L2 -12 3260 3141 812 76 0 0 chr2 75938603 75938708 -174749146 + AluY SINE Alu 197 301 -10 600 344 139 31 chr2 75938897 75939659 -174748195 - L2 LINE L2 -540 2774 1931 26 74 0 0 chr2 75939820 75939874 -174747980 + AT_rich Low_complexity Low_complexity 1 54 0 607 101 0 0 chr2 75940585 75940674 -174747180 - Alu SINE Alu -2 308 220 2248 69 0 4 chr2 75940896 75941171 -174746683 - AluSc SINE Alu -34 275 2 2369 14 42 14 chr2 75941186 75941472 -174746382 - AluY SINE Alu -17 294 1 354 261 67 60 chr2 75941746 75941880 -174745974 - L2 LINE L2 0 3313 3179 832 294 87 39 chr2 75942103 75942899 -174744955 + L1M4 LINE L1 3543 4376 -1770 408 289 35 5 chr2 75942981 75943182 -174744672 + L1M4 LINE L1 4496 4702 -1444 4133 116 19 6 chr2 75943396 75944026 -174743828 + HSMAR2 DNA Mariner 1 638 -664 1519 132 78 81 chr2 75944027 75944375 -174743479 + THE1C LTR MaLR 1 347 -28 293 65 22 0 chr2 75944432 75944478 -174743376 - L1PA6 LINE L1 0 6154 6108 738 188 208 12 chr2 75944676 75944921 -174742933 + Charlie1 DNA MER1_type 2469 2761 0 1834 144 0 20 chr2 75945385 75945690 -174742164 + AluSx SINE Alu 1 299 -13 985 267 0 8 chr2 75945745 75946007 -174741847 + AluJb SINE Alu 13 272 -40 22 35 0 0 chr2 75946755 75946784 -174741070 + AT_rich Low_complexity Low_complexity 1 29 0 286 299 11 23 chr2 75947999 75948086 -174739768 - MLT1K LTR MaLR -347 241 156 356 113 145 0 chr2 75948371 75948433 -174739421 - MER92C LTR ERV1 0 554 484 478 222 19 86 chr2 75948494 75948588 -174739266 - MER92B LTR ERV1 -485 151 52 223 37 0 0 chr2 75948588 75948615 -174739239 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 2116 121 3 0 chr2 75948615 75948897 -174738957 - AluSq SINE Alu -30 283 1 478 222 19 86 chr2 75948897 75948963 -174738891 - MER92B LTR ERV1 -582 54 1 1932 128 33 10 chr2 75949169 75949473 -174738381 + AluSx SINE Alu 1 311 -1 837 113 8 8 chr2 75949473 75949597 -174738257 + THE1-int LTR MaLR 848 971 -609 21 36 0 0 chr2 75949785 75949813 -174738041 + AT_rich Low_complexity Low_complexity 1 28 0 281 154 138 0 chr2 75949813 75949878 -174737976 + L2 LINE L2 2737 2810 -504 437 273 31 47 chr2 75949879 75950007 -174737847 - MER5B DNA MER1_type -1 177 52 316 270 0 34 chr2 75950197 75950286 -174737568 + MLT1K LTR MaLR 322 407 -181 282 51 85 0 chr2 75950407 75950466 -174737388 + T-rich Low_complexity Low_complexity 2 65 0 184 363 10 20 chr2 75950737 75950839 -174737015 + L3 LINE CR1 1476 1576 -1 1784 85 119 4 chr2 75951227 75951487 -174736367 + AluSg1 SINE Alu 1 290 -19 1892 160 0 3 chr2 75952188 75952476 -174735378 + AluJb SINE Alu 1 287 -25 186 133 0 0 chr2 75952805 75952835 -174735019 + (GAA)n Simple_repeat Simple_repeat 2 31 0 693 161 8 8 chr2 75953927 75954045 -174733809 + AluJb SINE Alu 1 118 -194 21 36 0 0 chr2 75954045 75954073 -174733781 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr2 75954682 75954708 -174733146 + AT_rich Low_complexity Low_complexity 1 26 0 1792 182 3 0 chr2 75955103 75955405 -174732449 + AluSx SINE Alu 1 303 -9 2102 129 0 7 chr2 75955752 75956047 -174731807 - AluSx SINE Alu -19 293 1 841 227 154 7 chr2 75956562 75956905 -174730949 + L1MC4 LINE L1 7646 7995 0 728 243 36 59 chr2 75956907 75957129 -174730725 + MIR SINE MIR 25 241 -21 2067 136 3 0 chr2 75957136 75957437 -174730417 + AluSx SINE Alu 1 302 -10 210 329 26 0 chr2 75957915 75957991 -174729863 + L2 LINE L2 2946 3023 -249 6748 42 1 8 chr2 75959926 75960773 -174727081 - L1PA6 LINE L1 -33 6121 5281 2014 113 4 0 chr2 75960824 75961089 -174726765 - AluSq SINE Alu -47 266 1 233 157 0 59 chr2 75961089 75961132 -174726722 + MSTA LTR MaLR 387 428 0 4398 132 18 0 chr2 75961133 75961786 -174726068 + HSMAR2 DNA Mariner 636 1300 -2 261 259 14 85 chr2 75962049 75962261 -174725593 + L1M3 LINE L1 5254 5450 -721 2462 95 0 27 chr2 75962581 75962949 -174724905 + L1PA14 LINE L1 5786 6143 -18 309 246 28 78 chr2 75963015 75963157 -174724697 + L1ME4a LINE L1 5980 6114 -7 281 228 33 22 chr2 75963406 75963498 -174724356 + GA-rich Low_complexity Low_complexity 1 93 0 2281 95 7 0 chr2 75963634 75963929 -174723925 + AluSp SINE Alu 3 299 -14 184 311 33 33 chr2 75965322 75965383 -174722471 + MIR SINE MIR 40 100 -108 2113 131 3 3 chr2 75970212 75970518 -174717336 + AluJb SINE Alu 1 306 -6 1488 230 37 29 chr2 75970714 75971122 -174716732 + L1MC4 LINE L1 5256 5666 -2142 2743 213 40 32 chr2 75971159 75971876 -174715978 - L1ME1 LINE L1 0 6166 5444 590 249 164 28 chr2 75971887 75973687 -174714167 + L1MC4 LINE L1 5711 7918 -124 520 261 42 7 chr2 75974651 75974793 -174713061 - Charlie8 DNA MER1_type -2270 147 1 249 297 0 14 chr2 75974991 75975065 -174712789 - MIR SINE MIR -109 153 81 1678 180 52 46 chr2 75975137 75975525 -174712329 + MLT1B LTR MaLR 1 390 0 311 317 8 17 chr2 75976047 75976167 -174711687 - MIR SINE MIR 0 262 144 817 129 0 17 chr2 75976410 75976526 -174711328 + AluJb SINE Alu 1 114 -198 23 0 0 0 chr2 75977168 75977191 -174710663 + AT_rich Low_complexity Low_complexity 1 23 0 430 276 167 6 chr2 75977374 75977530 -174710324 + MER5A DNA MER1_type 9 189 0 2198 88 14 3 chr2 75978976 75979272 -174708582 + AluY SINE Alu 1 299 -12 240 363 66 0 chr2 75979536 75979627 -174708227 - MIR SINE MIR -89 173 77 21 0 0 0 chr2 75979816 75979837 -174708017 + AT_rich Low_complexity Low_complexity 1 21 0 285 277 62 0 chr2 75979839 75979904 -174707950 - MIR SINE MIR -186 76 8 183 80 0 0 chr2 75980861 75980886 -174706968 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 322 321 176 6 chr2 75981569 75981734 -174706120 - MIR3 SINE MIR 0 208 16 514 226 36 15 chr2 75981785 75981922 -174705932 - MER103 DNA DNA -7 159 20 30 27 0 0 chr2 75982797 75982834 -174705020 + AT_rich Low_complexity Low_complexity 1 37 0 292 285 62 42 chr2 75983736 75983880 -174703974 - L2 LINE L2 -9 3304 3158 360 230 159 24 chr2 75985061 75985187 -174702667 + MIR SINE MIR 65 207 -55 2307 98 7 3 chr2 75985278 75985585 -174702269 - AluSx SINE Alu -4 308 1 2856 177 32 50 chr2 75986751 75987367 -174700487 + L1PA16 LINE L1 1107 1711 -5138 1340 196 20 49 chr2 75987367 75987673 -174700181 + AluSx SINE Alu 1 297 -15 810 90 0 0 chr2 75987681 75987781 -174700073 - AluSp/q SINE Alu -18 295 196 1012 127 0 0 chr2 75987783 75987933 -174699921 + L1PA16 LINE L1 1705 1854 -4995 241 169 92 31 chr2 75987942 75988007 -174699847 - L1PA15-16 LINE L1 -5496 1353 1285 6002 203 36 31 chr2 75988019 75988853 -174699001 + L1PA16 LINE L1 1856 2684 -4165 2145 119 6 6 chr2 75988853 75989164 -174698690 - AluSx SINE Alu -1 311 1 6002 203 36 31 chr2 75989164 75990457 -174697397 + L1PA16 LINE L1 2684 3995 -2854 2032 115 42 0 chr2 75990457 75990744 -174697110 + AluSx SINE Alu 1 299 -13 6002 203 36 31 chr2 75990744 75991044 -174696810 + L1PA16 LINE L1 3995 4292 -2557 5944 131 20 29 chr2 75991024 75991612 -174696242 + L1PA16 LINE L1 5478 6070 -799 * 2345 94 0 3 chr2 75991612 75991921 -174695933 + AluSc SINE Alu 1 308 -1 5944 131 20 29 chr2 75991921 75992713 -174695141 + L1PA16 LINE L1 6070 6860 -9 4028 185 22 22 chr2 75992808 75993788 -174694066 + L1MB2 LINE L1 5127 6115 -56 35 24 0 0 chr2 75993805 75993847 -174694007 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 75993888 75993909 -174693945 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr2 75997232 75997280 -174690574 + AT_rich Low_complexity Low_complexity 1 48 0 264 336 29 19 chr2 75997747 75997851 -174690003 + L1MEd LINE L1 567 671 -5448 497 206 0 22 chr2 75997876 75997968 -174689886 + MER21B LTR ERV1 1 90 -773 2247 261 61 44 chr2 75997990 75998765 -174689089 + MER21B LTR ERV1 19 806 -57 720 243 59 79 chr2 75998942 75999197 -174688657 + L1M4 LINE L1 3289 3548 -2598 229 67 0 0 chr2 75999197 75999227 -174688627 + (TTG)n Simple_repeat Simple_repeat 2 180 0 1506 196 4 11 chr2 75999227 75999503 -174688351 - AluJo SINE Alu -1 311 9 720 243 59 79 chr2 75999503 75999636 -174688218 + L1M4 LINE L1 3546 3671 -2475 248 361 41 8 chr2 75999899 76000021 -174687833 + L2 LINE L2 3188 3313 0 2157 112 0 7 chr2 76000206 76000491 -174687363 + AluSx SINE Alu 2 284 -28 315 65 0 0 chr2 76000491 76000537 -174687317 + (TA)n Simple_repeat Simple_repeat 2 47 0 51 31 0 0 chr2 76000596 76000661 -174687193 + AT_rich Low_complexity Low_complexity 1 65 0 337 268 145 41 chr2 76000939 76001354 -174686500 + HAL1b LINE L1 65 522 -826 1906 236 184 41 chr2 76001382 76002194 -174685660 + L1ME LINE L1 6 933 -5112 247 246 46 0 chr2 76002224 76002289 -174685565 - L1MB7 LINE L1 -97 6087 6020 677 174 43 7 chr2 76002299 76002437 -174685417 + L1MB5 LINE L1 6030 6172 -2 378 179 19 70 chr2 76002479 76002635 -174685219 + L1MC2 LINE L1 2187 2334 -4230 8812 235 58 29 chr2 76002741 76005520 -174682334 + L1MC2 LINE L1 2380 5078 -1684 1805 166 0 10 chr2 76005520 76005828 -174682026 + AluJb SINE Alu 1 305 -7 8812 235 58 29 chr2 76005828 76006476 -174681378 + L1MC2 LINE L1 5078 5706 -1056 564 15 0 0 chr2 76006476 76006541 -174681313 + (TG)n Simple_repeat Simple_repeat 2 66 0 2337 83 0 10 chr2 76006546 76006848 -174681006 - AluY SINE Alu -12 299 1 8812 235 58 29 chr2 76006848 76007396 -174680458 + L1MC2 LINE L1 5709 6429 -333 283 267 163 15 chr2 76007438 76007573 -174680281 - L2 LINE L2 -1886 1428 1274 180 97 0 0 chr2 76008436 76008467 -174679387 + (T)n Simple_repeat Simple_repeat 1 31 0 473 320 44 25 chr2 76009775 76009978 -174677876 - MIR SINE MIR -3 259 53 21 0 0 0 chr2 76010063 76010084 -174677770 + AT_rich Low_complexity Low_complexity 1 21 0 2180 99 30 10 chr2 76010374 76010678 -174677176 + AluSg SINE Alu 1 310 0 411 212 0 12 chr2 76011852 76011937 -174675917 + FLAM SINE Alu 44 127 -16 1848 136 66 0 chr2 76011986 76012272 -174675582 - AluSx SINE Alu -7 305 1 831 189 87 39 chr2 76012630 76012836 -174675018 + MSTD LTR MaLR 181 396 0 535 276 25 25 chr2 76014538 76014821 -174673033 + L1ME LINE L1 1107 1389 -5165 403 15 0 73 chr2 76014824 76014892 -174672962 + SVA Other Other 1324 1386 0 642 284 48 62 chr2 76014999 76015495 -174672359 + L1ME LINE L1 1590 2078 -4667 226 83 28 0 chr2 76015671 76015707 -174672147 - MADE1 DNA Mariner -43 37 1 3065 219 97 57 chr2 76015708 76016442 -174671412 + L1MC3 LINE L1 6675 7465 -320 1858 126 31 7 chr2 76016442 76016736 -174671118 + AluSx SINE Alu 1 301 -11 3065 219 97 57 chr2 76016736 76017040 -174670814 + L1MC3 LINE L1 7465 7755 -30 207 0 0 0 chr2 76017062 76017085 -174670769 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 344 266 84 44 chr2 76017091 76017317 -174670537 + L1ME4a LINE L1 5741 5975 -146 1860 129 28 3 chr2 76017362 76017648 -174670206 + AluSx SINE Alu 1 293 -19 235 289 0 13 chr2 76017758 76017834 -174670020 + MLT1L LTR MaLR 1 75 -540 356 241 41 73 chr2 76017991 76018202 -174669652 + MLT1J LTR MaLR 303 584 -31 24 53 0 0 chr2 76018766 76018804 -174669050 + AT_rich Low_complexity Low_complexity 1 38 0 1061 194 124 21 chr2 76019180 76019491 -174668363 + MER58B DNA MER1_type 3 341 0 24 0 0 0 chr2 76020618 76020642 -174667212 + AT_rich Low_complexity Low_complexity 1 24 0 871 201 6 6 chr2 76020734 76020913 -174666941 - MER57A LTR ERV1 0 403 225 2556 148 66 33 chr2 76020917 76021459 -174666395 + Tigger3b DNA MER2_type 133 692 -539 1948 156 39 10 chr2 76021459 76021849 -174666005 + L1 LINE L1 4446 4846 -1300 1746 107 29 32 chr2 76021861 76022142 -174665712 - THE1B LTR MaLR -84 280 1 2295 87 6 3 chr2 76022142 76022454 -174665400 - THE1B-int LTR MaLR 0 1580 1268 720 372 72 19 chr2 76022802 76023232 -174664622 + L1PA13 LINE L1 1 453 -6334 1271 64 17 6 chr2 76023568 76023741 -174664113 + L1PA11 LINE L1 5996 6170 -4 46 33 0 0 chr2 76023741 76023801 -174664053 + AT_rich Low_complexity Low_complexity 1 60 0 5193 122 55 7 chr2 76023801 76024911 -174662943 + L1PA16 LINE L1 5004 6157 -9 213 186 114 43 chr2 76025526 76025596 -174662258 + MER5A DNA MER1_type 72 146 -43 920 226 100 51 chr2 76025604 76025711 -174662143 + L1ME3A LINE L1 5259 5359 -811 1901 141 13 10 chr2 76025711 76026009 -174661845 + AluJb SINE Alu 1 299 -13 920 226 100 51 chr2 76026009 76026251 -174661603 + L1ME3A LINE L1 5359 5625 -545 611 242 81 5 chr2 76026250 76026436 -174661418 + L1ME3A LINE L1 5966 6165 -5 * 217 322 59 17 chr2 76026470 76026588 -174661266 + L2 LINE L2 2140 2262 -1052 1252 143 174 19 chr2 76027418 76027677 -174660177 - AluJo SINE Alu -12 300 2 1496 196 7 25 chr2 76027740 76028025 -174659829 + AluJo SINE Alu 3 282 -30 400 335 193 0 chr2 76028045 76028242 -174659612 - MIR SINE MIR 0 262 28 677 203 45 0 chr2 76028362 76028495 -174659359 - FLAM_C SINE Alu -4 139 1 309 159 0 0 chr2 76028508 76028571 -174659283 + (TA)n Simple_repeat Simple_repeat 1 63 0 217 338 38 0 chr2 76029699 76029779 -174658075 + L3b LINE CR1 1493 1575 -8 21 82 0 0 chr2 76030808 76030857 -174656997 + AT_rich Low_complexity Low_complexity 1 49 0 548 226 0 0 chr2 76031069 76031171 -174656683 - FLAM_A SINE Alu -40 102 1 25 0 0 0 chr2 76031330 76031355 -174656499 + AT_rich Low_complexity Low_complexity 1 25 0 1785 161 3 17 chr2 76031416 76031708 -174656146 - AluJo SINE Alu -24 288 1 1593 185 25 24 chr2 76031772 76032134 -174655720 + MLT1A1 LTR MaLR 2 365 0 575 348 167 26 chr2 76032232 76032986 -174654868 - L3 LINE CR1 -237 1340 481 231 335 106 24 chr2 76033075 76033245 -174654609 + L2 LINE L2 2903 3086 -186 244 254 100 9 chr2 76033449 76033559 -174654295 + L2 LINE L2 96 215 -3099 376 331 7 20 chr2 76033585 76033733 -174654121 + Charlie8 DNA MER1_type 84 229 -2188 321 197 0 0 chr2 76034471 76034537 -174653317 + (TA)n Simple_repeat Simple_repeat 2 67 0 294 95 0 0 chr2 76034675 76034717 -174653137 + (TG)n Simple_repeat Simple_repeat 2 43 0 564 15 0 0 chr2 76034878 76034943 -174652911 + (GA)n Simple_repeat Simple_repeat 2 66 0 1792 166 4 0 chr2 76034943 76035220 -174652634 - AluJb SINE Alu -34 278 1 392 308 101 51 chr2 76035543 76036076 -174651778 + L1ME4a LINE L1 5305 5864 -257 1357 197 67 3 chr2 76036104 76036388 -174651466 - AluJb SINE Alu -6 306 5 180 0 0 0 chr2 76036719 76036739 -174651115 + (TTG)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr2 76036768 76036788 -174651066 + (TTG)n Simple_repeat Simple_repeat 1 20 0 189 171 0 0 chr2 76036817 76036852 -174651002 + (CTG)n Simple_repeat Simple_repeat 1 35 0 374 251 34 117 chr2 76036936 76037115 -174650739 + MIR SINE MIR 63 226 -36 205 350 60 68 chr2 76037327 76037593 -174650261 - L2 LINE L2 -189 3083 2820 365 339 0 0 chr2 76037603 76037724 -174650130 + MER58 DNA MER1_type 6 126 -89 323 190 17 0 chr2 76037729 76037787 -174650067 + L1MC/D LINE L1 27 85 -6455 * 591 253 42 32 chr2 76037762 76037952 -174649902 + L1MC/D LINE L1 368 559 -5981 4038 222 56 51 chr2 76037979 76039357 -174648497 + L1MC/D LINE L1 2889 4273 -2267 1062 207 29 41 chr2 76039393 76039639 -174648215 + AluJo SINE Alu 43 285 -27 670 134 17 28 chr2 76039688 76039867 -174647987 + GA-rich Low_complexity Low_complexity 1 177 0 455 190 0 13 chr2 76039868 76039947 -174647907 + polypurine Low_complexity Low_complexity 3 80 0 1194 259 59 20 chr2 76039991 76040482 -174647372 + L1MC/D LINE L1 4271 4780 -1760 569 296 29 29 chr2 76040823 76041131 -174646723 + L1 LINE L1 3197 3504 -2642 7038 205 51 29 chr2 76041144 76043451 -174644403 + L1PA13 LINE L1 1 2470 -4327 249 56 56 0 chr2 76043446 76043482 -174644372 - L1P LINE L1 -4290 1856 1819 * 37408 86 11 14 chr2 76043497 76044906 -174642948 + L1PA3 LINE L1 662 2075 -4730 7707 16 7 0 chr2 76044906 76046533 -174641321 + L1PA3 LINE L1 5174 6806 0 37408 86 11 14 chr2 76046533 76046559 -174641295 + L1PA3 LINE L1 2075 2100 -4705 252 77 0 0 chr2 76046559 76046598 -174641256 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 37408 86 11 14 chr2 76046598 76051355 -174636499 + L1PA3 LINE L1 2100 6459 -346 3513 118 26 24 chr2 76051355 76051620 -174636234 + L1MA3 LINE L1 5686 5949 -356 1754 161 17 20 chr2 76051620 76051919 -174635935 + AluJo SINE Alu 1 298 -14 3513 118 26 24 chr2 76051919 76052266 -174635588 + L1MA3 LINE L1 5949 6303 -2 28 61 0 0 chr2 76052294 76052343 -174635511 + AT_rich Low_complexity Low_complexity 1 49 0 1286 204 71 21 chr2 76052343 76052725 -174635129 + L1MC/D LINE L1 5037 5437 -1103 2051 154 15 0 chr2 76052725 76053057 -174634797 + MER1B DNA MER1_type 1 337 0 2198 96 23 0 chr2 76053078 76053381 -174634473 + AluY SINE Alu 1 310 -1 680 245 82 4 chr2 76053392 76053657 -174634197 + L1MC/D LINE L1 5691 5992 -644 473 141 94 24 chr2 76053665 76053750 -174634104 + FRAM SINE Alu 67 157 -19 384 344 119 9 chr2 76053853 76054071 -174633783 - MIR SINE MIR -19 243 2 402 118 66 13 chr2 76054262 76054338 -174633516 - MADE1 DNA Mariner 0 80 1 1530 59 102 76 chr2 76054390 76054626 -174633228 - AluY SINE Alu -24 287 46 303 220 52 12 chr2 76055416 76055589 -174632265 + (TA)n Simple_repeat Simple_repeat 1 180 0 679 174 0 0 chr2 76055624 76055733 -174632121 + AluJb SINE Alu 3 111 -201 28 0 0 0 chr2 76055735 76055763 -174632091 + AT_rich Low_complexity Low_complexity 1 28 0 4336 22 0 0 chr2 76055824 76056325 -174631529 + L1PA3 LINE L1 5652 6152 -3 24 0 0 0 chr2 76056325 76056349 -174631505 + AT_rich Low_complexity Low_complexity 1 24 0 2402 64 0 3 chr2 76056720 76057016 -174630838 - AluY SINE Alu -4 307 13 24 53 0 0 chr2 76058074 76058112 -174629742 + AT_rich Low_complexity Low_complexity 1 38 0 335 198 121 26 chr2 76058125 76058241 -174629613 + HAL1b LINE L1 397 523 -825 320 319 31 43 chr2 76058340 76058503 -174629351 + HAL1b LINE L1 601 761 -587 1539 83 5 0 chr2 76058933 76059126 -174628728 - AluSp SINE Alu -119 194 1 2023 121 0 23 chr2 76059201 76059508 -174628346 - AluSx SINE Alu -12 300 1 270 81 0 0 chr2 76059534 76059571 -174628283 + (T)n Simple_repeat Simple_repeat 1 37 0 438 306 135 18 chr2 76059588 76059758 -174628096 + MLT1J LTR MaLR 248 437 -74 28 0 0 0 chr2 76059982 76060010 -174627844 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chr2 76060263 76060287 -174627567 + (A)n Simple_repeat Simple_repeat 1 24 0 314 357 76 36 chr2 76062709 76062933 -174624921 + L1MDa LINE L1 118 350 -6190 1848 227 99 104 chr2 76063209 76064723 -174623131 + L1MD3 LINE L1 4130 5014 -1132 1810 110 73 7 chr2 76064723 76064995 -174622859 - AluSc SINE Alu -19 290 1 1848 227 99 104 chr2 76064995 76065382 -174622472 + L1MD3 LINE L1 5014 5402 -744 513 204 92 0 chr2 76065447 76065589 -174622265 + L1M4 LINE L1 2856 3010 -3136 2217 162 27 10 chr2 76065589 76066003 -174621851 + L1MC2 LINE L1 5907 6327 -17 622 200 35 48 chr2 76066005 76066150 -174621704 + AluJo SINE Alu 3 145 -167 1379 330 35 40 chr2 76066156 76066813 -174621041 + L1P4 LINE L1 788 1441 -6133 341 335 6 14 chr2 76066795 76067011 -174620843 + L1P4 LINE L1 2083 2306 -5268 * 3510 226 39 6 chr2 76067239 76068435 -174619419 + L1P4 LINE L1 2984 4239 -3345 * 5686 189 29 12 chr2 76068433 76068757 -174619097 + L1P4 LINE L1 5507 5824 -1780 387 0 0 0 chr2 76068757 76068800 -174619054 + (CA)n Simple_repeat Simple_repeat 2 44 0 5686 189 29 12 chr2 76068800 76068841 -174619013 + L1P4 LINE L1 5824 5863 -1741 2044 121 3 3 chr2 76068841 76069139 -174618715 - AluY SINE Alu -13 298 1 5686 189 29 12 chr2 76069139 76070140 -174617714 + L1P4 LINE L1 5863 6892 -712 250 139 0 0 chr2 76070128 76070171 -174617683 + L1PA16 LINE L1 2823 2865 -3984 * 4279 166 0 3 chr2 76070172 76070914 -174616940 + L1PA16 LINE L1 6128 6867 -2 866 224 0 0 chr2 76070916 76071068 -174616786 + AluJo SINE Alu 137 288 -24 26 0 0 0 chr2 76071068 76071094 -174616760 + AT_rich Low_complexity Low_complexity 1 26 0 2032 245 61 30 chr2 76071707 76072397 -174615457 + MER20B DNA MER1_type 70 780 -3 332 330 108 30 chr2 76072411 76072614 -174615240 + L2 LINE L2 2595 2813 -501 902 252 90 45 chr2 76072653 76072986 -174614868 + L2 LINE L2 1987 2334 -980 2767 148 21 66 chr2 76072986 76073388 -174614466 + L1M1 LINE L1 4987 5330 -970 2062 108 13 19 chr2 76073388 76073886 -174613968 + AluSq SINE Alu 1 313 0 2767 148 21 66 chr2 76073886 76074324 -174613530 + L1M1 LINE L1 5330 5786 -514 23 0 0 0 chr2 76074457 76074480 -174613374 + AT_rich Low_complexity Low_complexity 1 23 0 2072 109 18 3 chr2 76074765 76075050 -174612804 - AluSx SINE Alu -23 289 1 2620 179 92 20 chr2 76075118 76075716 -174612138 + L1ME2 LINE L1 5431 6071 -93 343 243 31 72 chr2 76075848 76076070 -174611784 + L1MC4 LINE L1 7829 8041 -1 2274 82 7 0 chr2 76077682 76077976 -174609878 + AluY SINE Alu 1 296 -15 1281 279 124 51 chr2 76078211 76078911 -174608943 + HAL1 LINE L1 1 751 -1756 1316 243 71 71 chr2 76079051 76079541 -174608313 - LTR16C LTR ERVL 0 491 2 1909 196 56 31 chr2 76081638 76081801 -174606053 + MLT1C LTR MaLR 6 164 -303 771 171 0 0 chr2 76081801 76081918 -174605936 + FLAM_C SINE Alu 2 118 -15 188 35 35 0 chr2 76081923 76081952 -174605902 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 1909 196 56 31 chr2 76081952 76082231 -174605623 + MLT1C LTR MaLR 167 465 -2 2071 123 0 7 chr2 76082505 76082807 -174605047 - AluSq SINE Alu -13 300 1 255 164 33 0 chr2 76082813 76082874 -174604980 + L2 LINE L2 3107 3169 -144 2419 77 0 0 chr2 76083175 76083474 -174604380 - AluY SINE Alu -12 299 1 590 100 0 0 chr2 76084115 76084195 -174603659 - AluY SINE Alu -14 297 218 1992 139 7 7 chr2 76084991 76085293 -174602561 + AluSx SINE Alu 5 306 -6 828 280 99 26 chr2 76086832 76087214 -174600640 + Charlie7 DNA MER1_type 86 495 -2117 846 248 46 58 chr2 76087258 76087722 -174600132 + MLT1H LTR MaLR 37 549 0 622 228 71 11 chr2 76087722 76087906 -174599948 + Charlie7 DNA MER1_type 495 689 -1923 189 182 0 0 chr2 76087926 76087981 -174599873 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 1692 179 7 0 chr2 76088236 76088510 -174599344 + AluJb SINE Alu 6 281 -31 2397 85 0 3 chr2 76090025 76090330 -174597524 + AluSg1 SINE Alu 1 304 -5 1300 171 0 5 chr2 76090719 76090930 -174596924 + MER2 DNA MER2_type 1 210 -135 315 0 0 0 chr2 76091065 76091100 -174596754 + (CA)n Simple_repeat Simple_repeat 2 36 0 902 129 0 67 chr2 76091381 76091509 -174596345 + L1MB3 LINE L1 6016 6130 -53 1877 108 89 0 chr2 76091509 76091778 -174596076 + AluSq SINE Alu 1 293 -20 902 129 0 67 chr2 76091778 76091827 -174596027 + L1MB3 LINE L1 6130 6181 -2 2073 107 7 7 chr2 76091889 76092178 -174595676 + AluSc SINE Alu 1 289 -20 21 0 0 0 chr2 76092328 76092349 -174595505 + AT_rich Low_complexity Low_complexity 1 21 0 331 316 168 31 chr2 76092682 76092973 -174594881 - L1 LINE L1 -1172 4974 4644 859 105 0 8 chr2 76093252 76093376 -174594478 + AluSc SINE Alu 175 297 -12 10933 19 1 1 chr2 76093937 76095982 -174591872 - L1PA2 LINE L1 0 6155 4111 12231 26 2 0 chr2 76095982 76097463 -174590391 + L1PA2 LINE L1 2627 4110 -2036 195 162 0 0 chr2 76097713 76097750 -174590104 + (CA)n Simple_repeat Simple_repeat 1 37 0 1181 148 5 29 chr2 76098393 76098603 -174589251 - AluJo SINE Alu -21 291 87 1165 246 147 48 chr2 76098753 76099250 -174588604 + MLT1H1 LTR MaLR 10 555 0 316 306 71 41 chr2 76099356 76099422 -174588432 + L2 LINE L2 3112 3175 -138 2432 86 0 0 chr2 76099422 76099725 -174588129 - AluSg SINE Alu -7 303 1 316 306 71 41 chr2 76099725 76099854 -174588000 + L2 LINE L2 3175 3313 0 26 50 0 0 chr2 76100052 76100092 -174587762 + AT_rich Low_complexity Low_complexity 1 40 0 536 226 24 0 chr2 76100388 76100512 -174587342 - L1ME1 LINE L1 -17 6149 6023 * 826 244 38 34 chr2 76100507 76100745 -174587109 + L1ME1 LINE L1 5911 6149 -17 1567 162 3 49 chr2 76100762 76101046 -174586808 - AluJo SINE Alu -31 281 11 26 0 0 0 chr2 76101055 76101081 -174586773 + AT_rich Low_complexity Low_complexity 1 26 0 457 91 0 30 chr2 76102065 76102131 -174585723 - AluY SINE Alu -159 152 89 2666 146 73 41 chr2 76103490 76104023 -174583831 - MER44D DNA MER2_type 0 605 1 1508 221 21 77 chr2 76104268 76104836 -174583018 - MLT1E3 LTR MaLR 0 624 1 1749 39 0 0 chr2 76105445 76105653 -174582201 - L1PA3 LINE L1 0 6155 5948 745 214 122 10 chr2 76105858 76106054 -174581800 + MLT1J2 LTR MaLR 1 218 -232 1601 98 152 12 chr2 76106999 76107255 -174580599 + AluSg1 SINE Alu 2 293 -16 215 125 56 0 chr2 76107440 76107512 -174580342 + (TA)n Simple_repeat Simple_repeat 2 77 0 883 263 116 20 chr2 76108000 76108346 -174579508 + MLT1J2 LTR MaLR 1 379 -71 189 222 0 0 chr2 76108374 76108410 -174579444 - L2 LINE L2 -14 3299 3264 368 316 34 8 chr2 76108665 76108782 -174579072 + MIR3 SINE MIR 47 166 -42 1739 180 40 0 chr2 76110589 76110889 -174576965 + AluSx SINE Alu 1 312 0 263 258 128 38 chr2 76110956 76111148 -174576706 + L1M4b LINE L1 20 543 -6312 22 0 0 0 chr2 76111290 76111312 -174576542 + AT_rich Low_complexity Low_complexity 1 22 0 352 268 25 78 chr2 76111465 76111708 -174576146 + L1M4b LINE L1 954 1183 -5672 1613 253 70 37 chr2 76111708 76112479 -174575375 + L1M4b LINE L1 2366 3169 -3969 1731 186 10 16 chr2 76112479 76112791 -174575063 + AluJb SINE Alu 1 310 -2 1613 253 70 37 chr2 76112791 76112882 -174574972 + L1M4b LINE L1 3169 3256 -3882 2031 151 0 0 chr2 76113060 76113352 -174574502 + AluSx SINE Alu 1 292 -20 207 0 0 0 chr2 76113378 76113401 -174574453 + (A)n Simple_repeat Simple_repeat 1 23 0 960 189 30 0 chr2 76114049 76114213 -174573641 + AluJo SINE Alu 1 169 -143 727 173 14 0 chr2 76114213 76114352 -174573502 + L1MB4 LINE L1 6034 6174 -6 255 236 121 14 chr2 76114355 76114495 -174573359 + L1MEc LINE L1 1628 1782 -4614 24 0 0 0 chr2 76114663 76114687 -174573167 + AT_rich Low_complexity Low_complexity 1 24 0 1443 86 0 0 chr2 76114748 76114923 -174572931 + AluSx SINE Alu 1 175 -137 685 283 63 34 chr2 76115388 76115625 -174572229 + MIR SINE MIR 2 245 -17 2267 117 0 0 chr2 76115628 76115927 -174571927 - AluSx SINE Alu -13 299 1 1898 233 104 57 chr2 76116302 76116436 -174571418 - L2 LINE L2 -834 2480 2354 2140 132 0 3 chr2 76116436 76116732 -174571122 + AluSx SINE Alu 1 295 -17 1898 233 104 57 chr2 76116732 76116973 -174570881 - L2 LINE L2 -960 2354 2126 512 186 155 6 chr2 76116973 76117134 -174570720 - MER53 DNA DNA 0 189 5 1898 233 104 57 chr2 76117134 76117409 -174570445 - L2 LINE L2 -1188 2126 1798 1344 156 0 32 chr2 76118001 76118219 -174569635 + AluJo SINE Alu 1 211 -101 336 48 0 0 chr2 76118256 76118298 -174569556 + (TC)n Simple_repeat Simple_repeat 1 42 0 1016 99 0 0 chr2 76118372 76118503 -174569351 + AluY SINE Alu 1 131 -180 1083 120 0 38 chr2 76118603 76118787 -174569067 + U2 snRNA snRNA 8 184 -4 216 0 0 0 chr2 76119247 76119271 -174568583 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 467 291 6 23 chr2 76120551 76120723 -174567131 + L1MEc LINE L1 44 212 -6184 189 0 0 0 chr2 76120835 76120856 -174566998 + (TTTTA)n Simple_repeat Simple_repeat 5 25 0 206 268 18 36 chr2 76120872 76120928 -174566926 + L2 LINE L2 3128 3182 -90 335 295 97 9 chr2 76121847 76122074 -174565780 + L2 LINE L2 2699 2945 -369 744 227 35 25 chr2 76122393 76122596 -174565258 + L2 LINE L2 3109 3313 0 1783 136 7 61 chr2 76123500 76123810 -174564044 - AluJb SINE Alu -19 293 1 291 231 15 15 chr2 76124076 76124141 -174563713 + MIR SINE MIR 76 140 -122 1527 193 58 66 chr2 76124241 76124525 -174563329 + L1MEc LINE L1 1763 2048 -4167 1469 194 32 18 chr2 76124525 76124648 -174563206 + AluJo SINE Alu 1 121 -191 198 71 0 0 chr2 76124648 76124676 -174563178 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1469 194 32 18 chr2 76124676 76124835 -174563019 + AluJo SINE Alu 121 287 -25 1519 170 50 25 chr2 76124838 76125115 -174562739 + AluJb SINE Alu 1 284 -28 1527 193 58 66 chr2 76125115 76125580 -174562274 + L1MEc LINE L1 2050 2509 -3706 463 146 69 14 chr2 76125571 76125715 -174562139 + L1MEc LINE L1 3162 3313 -2902 * 1493 218 41 31 chr2 76125732 76126222 -174561632 + L1MEc LINE L1 2494 2988 -3227 631 175 16 40 chr2 76126228 76126354 -174561500 + AluJo SINE Alu 87 209 -103 459 0 0 0 chr2 76126384 76126435 -174561419 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 886 213 85 33 chr2 76126441 76126807 -174561047 + L1MEc LINE L1 3000 3384 -2831 1157 203 97 0 chr2 76126851 76127088 -174560766 + AluJb SINE Alu 33 292 -20 1622 133 86 25 chr2 76127098 76127377 -174560477 + AluSx SINE Alu 1 296 -16 230 185 0 0 chr2 76127383 76127437 -174560417 + L1MEc LINE L1 3440 3493 -2722 3371 232 50 13 chr2 76127488 76128580 -174559274 + L1MEc LINE L1 3584 4716 -1499 924 169 6 6 chr2 76128592 76128758 -174559096 + FRAM SINE Alu 1 166 0 591 166 22 22 chr2 76128923 76129062 -174558792 + L1MEc LINE L1 5192 5330 -885 379 83 111 14 chr2 76129063 76129135 -174558719 + L1MD2 LINE L1 6273 6351 -8 1672 169 21 7 chr2 76129143 76129433 -174558421 - AluJb SINE Alu -18 294 1 2223 150 17 10 chr2 76129540 76129947 -174557907 + L1MA7 LINE L1 5873 6282 -9 2396 79 3 13 chr2 76130558 76130861 -174556993 + AluSq SINE Alu 1 300 -13 526 221 0 69 chr2 76131540 76131685 -174556169 + MER91B DNA MER1_type 4 138 -52 1105 158 27 0 chr2 76132481 76132664 -174555190 - MER5A DNA MER1_type -1 188 1 322 291 126 15 chr2 76132789 76132988 -174554866 - L1ME4a LINE L1 0 6121 5901 2279 97 0 7 chr2 76133114 76133412 -174554442 - AluSg SINE Alu -14 296 1 567 244 45 0 chr2 76133420 76133576 -174554278 - L1ME4a LINE L1 -429 5692 5530 287 154 77 11 chr2 76134130 76134221 -174553633 - Charlie7 DNA MER1_type -77 2535 2439 789 241 24 42 chr2 76134688 76134900 -174552954 + MIR SINE MIR 5 212 -50 626 264 107 5 chr2 76135050 76135247 -174552607 + MIR SINE MIR 32 248 -14 1836 167 0 0 chr2 76135380 76135662 -174552192 - AluJo SINE Alu -20 292 11 1853 168 0 0 chr2 76135868 76136159 -174551695 - AluJo SINE Alu -13 299 9 22 0 0 0 chr2 76136166 76136188 -174551666 + AT_rich Low_complexity Low_complexity 1 22 0 2243 107 3 7 chr2 76136189 76136498 -174551356 - AluJb SINE Alu -4 308 1 25 31 0 0 chr2 76136755 76136787 -174551067 + AT_rich Low_complexity Low_complexity 1 32 0 188 207 0 0 chr2 76137174 76137203 -174550651 - L3 LINE CR1 -258 1319 1291 243 0 0 0 chr2 76137615 76137642 -174550212 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 2030 121 14 0 chr2 76137642 76137923 -174549931 - AluSq SINE Alu -28 285 1 253 311 197 8 chr2 76138837 76138959 -174548895 - L2 LINE L2 0 3272 3128 1658 98 0 5 chr2 76138984 76139199 -174548655 - AluY SINE Alu -12 299 86 23 0 0 0 chr2 76140375 76140398 -174547456 + AT_rich Low_complexity Low_complexity 1 23 0 2416 53 0 0 chr2 76140400 76140703 -174547151 + AluY SINE Alu 2 304 0 1834 142 7 10 chr2 76140898 76141207 -174546647 + AluJb SINE Alu 1 308 -4 1599 235 46 62 chr2 76141231 76141566 -174546288 + L1MC4a LINE L1 5352 5672 -2136 2168 123 0 0 chr2 76141566 76141874 -174545980 + AluSx SINE Alu 1 308 -4 1599 235 46 62 chr2 76141874 76142215 -174545639 + L1MC4a LINE L1 5672 6017 -1791 659 235 106 0 chr2 76143176 76143355 -174544499 - L2 LINE L2 -4 3309 3112 * 976 243 102 88 chr2 76143354 76143674 -174544180 + L2 LINE L2 2382 2696 -617 2143 111 0 7 chr2 76143674 76143828 -174544026 - AluSx SINE Alu -25 287 134 2291 65 3 53 chr2 76143828 76144150 -174543704 - AluY SINE Alu -5 306 1 2143 111 0 7 chr2 76144150 76144284 -174543570 - AluSx SINE Alu -178 134 1 976 243 102 88 chr2 76144284 76144819 -174543035 + L2 LINE L2 2696 3313 0 23 0 0 0 chr2 76145032 76145055 -174542799 + AT_rich Low_complexity Low_complexity 1 23 0 197 174 65 43 chr2 76145118 76145164 -174542690 - MER5A DNA MER1_type 0 189 143 24 32 0 0 chr2 76145606 76145637 -174542217 + AT_rich Low_complexity Low_complexity 1 31 0 4006 149 74 33 chr2 76146439 76147669 -174540185 + L1MB8 LINE L1 4904 6172 -6 1664 147 27 15 chr2 76148804 76149063 -174538791 + AluJb SINE Alu 36 297 -15 944 115 6 6 chr2 76149063 76149220 -174538634 - MER2 DNA MER2_type -79 266 110 1731 177 10 10 chr2 76149371 76149659 -174538195 + AluJb SINE Alu 1 288 -24 354 22 0 0 chr2 76149665 76149711 -174538143 + MADE1 DNA Mariner 1 46 -34 678 241 94 27 chr2 76150125 76150349 -174537505 + MIR SINE MIR 11 249 -13 206 273 0 65 chr2 76151930 76152007 -174535847 - MER5A DNA MER1_type -22 167 96 181 0 0 0 chr2 76152119 76152139 -174535715 + (TTTG)n Simple_repeat Simple_repeat 2 180 0 1161 66 0 0 chr2 76152139 76152290 -174535564 - AluY SINE Alu -28 283 133 2146 80 0 28 chr2 76152290 76152579 -174535275 - AluY SINE Alu -11 300 20 339 307 10 21 chr2 76152904 76153096 -174534758 + L1MC4a LINE L1 5763 5954 -167 192 152 0 0 chr2 76153101 76153134 -174534720 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 930 256 50 3 chr2 76154083 76154404 -174533450 - MER46C DNA MER2_type 0 338 3 966 206 160 36 chr2 76154981 76155374 -174532480 - L1MC4 LINE L1 0 8042 7601 778 200 0 0 chr2 76155428 76155558 -174532296 + FLAM_C SINE Alu 3 132 -1 353 198 0 23 chr2 76155567 76155653 -174532201 - Charlie1 DNA MER1_type -44 2717 2634 1120 218 56 11 chr2 76155657 76155942 -174531912 + L1M3e LINE L1 -723 4294966870 -6732 1939 246 62 36 chr2 76155944 76156757 -174531097 + L1M3e LINE L1 535 1368 -4938 1055 134 28 63 chr2 76156772 76156849 -174531005 + L1MA9 LINE L1 6069 6147 -165 2081 154 0 10 chr2 76156849 76157161 -174530693 - AluJb SINE Alu -1 311 3 1055 134 28 63 chr2 76157161 76157336 -174530518 + L1MA9 LINE L1 6147 6312 0 2281 197 82 3 chr2 76157337 76157946 -174529908 - Charlie1 DNA MER1_type -114 2647 1991 1259 186 14 38 chr2 76158095 76158386 -174529468 + L1MD2 LINE L1 5443 5726 -516 1909 239 58 51 chr2 76158436 76159088 -174528766 - MER21B LTR ERV1 -109 754 98 297 270 0 0 chr2 76159148 76159211 -174528643 - MER21B LTR ERV1 -780 83 21 1800 216 88 20 chr2 76159231 76159787 -174528067 + L1MD2 LINE L1 5721 6314 -45 245 231 31 0 chr2 76159803 76159868 -174527986 + (CATA)n Simple_repeat Simple_repeat 2 68 0 255 155 35 0 chr2 76159868 76159926 -174527928 + L1MD1 LINE L1 6183 6242 0 1797 150 17 17 chr2 76160068 76160362 -174527492 + AluJb SINE Alu 1 294 -18 1974 231 85 74 chr2 76160480 76160692 -174527162 + L1M3e LINE L1 1267 1475 -4907 2172 111 0 10 chr2 76160692 76160990 -174526864 + AluSx SINE Alu 1 295 -17 1974 231 85 74 chr2 76160990 76162142 -174525712 + L1M3e LINE L1 1475 2634 -3748 487 299 60 40 chr2 76162762 76163018 -174524836 - MIR SINE MIR 0 262 8 24 0 0 0 chr2 76163029 76163053 -174524801 + AT_rich Low_complexity Low_complexity 1 24 0 684 228 0 7 chr2 76163909 76164054 -174523800 - MLT1I LTR MaLR -7 402 259 924 241 29 0 chr2 76164070 76164277 -174523577 - MER58A DNA MER1_type -3 221 9 658 271 57 0 chr2 76164278 76164470 -174523384 - MLT1I LTR MaLR -179 230 28 2244 125 0 3 chr2 76164479 76164792 -174523062 + AluSx SINE Alu 1 312 0 4779 136 35 43 chr2 76165017 76165936 -174521918 - L1MA4A LINE L1 -7 6296 5383 2395 95 3 0 chr2 76165936 76166240 -174521614 - AluSg SINE Alu -1 309 5 4779 136 35 43 chr2 76166240 76166306 -174521548 - L1MA4A LINE L1 -920 5383 5318 967 215 132 55 chr2 76166466 76166872 -174520982 + LTR1B LTR ERV1 343 983 -37 4060 150 57 27 chr2 76167094 76167883 -174519971 - MER6 DNA MER2_type -1 864 52 614 136 41 54 chr2 76167884 76168031 -174519823 - LTR23 LTR ERV1 0 437 293 2092 133 0 0 chr2 76168058 76168343 -174519511 - AluSx SINE Alu -27 285 1 2119 115 0 3 chr2 76168364 76168677 -174519177 - AluSx SINE Alu 0 312 1 1589 109 51 0 chr2 76168685 76168959 -174518895 - LTR23 LTR ERV1 -139 298 11 314 352 22 44 chr2 76169223 76169327 -174518527 + MIR SINE MIR 48 148 -114 1678 138 0 91 chr2 76169327 76169646 -174518208 + AluJo SINE Alu 1 290 -22 314 352 22 44 chr2 76169646 76169723 -174518131 + MIR SINE MIR 148 225 -37 2216 103 100 0 chr2 76169853 76170192 -174517662 + MER83C LTR ERV1 1 373 0 670 167 0 0 chr2 76170377 76170485 -174517369 - FLAM_A SINE Alu -34 108 1 250 324 182 9 chr2 76170735 76171053 -174516801 + L2 LINE L2 1609 1981 -1333 342 262 78 74 chr2 76171211 76171455 -174516399 + MLT1H LTR MaLR 68 312 -237 303 334 185 18 chr2 76171580 76171909 -174515945 + L2 LINE L2 1960 2343 -971 1136 156 0 0 chr2 76171909 76172076 -174515778 - AluJb SINE Alu -12 300 134 180 304 95 34 chr2 76172613 76172761 -174515093 + L2 LINE L2 1053 1209 -2105 287 222 30 61 chr2 76172987 76173086 -174514768 - MLT1G LTR MaLR 0 590 495 2140 200 7 7 chr2 76173087 76173536 -174514318 - L1MB7 LINE L1 -76 6108 5660 1205 173 5 23 chr2 76173537 76173757 -174514097 - AluJb SINE Alu -12 300 85 438 97 0 14 chr2 76173757 76173829 -174514025 - L1MB7 LINE L1 -516 5668 5598 1781 185 14 0 chr2 76173829 76174126 -174513728 - AluJo SINE Alu -11 301 1 3504 177 55 31 chr2 76174131 76175184 -174512670 - L1MB7 LINE L1 -695 5489 4421 1971 193 56 30 chr2 76175205 76175342 -174512512 - L1MB7 LINE L1 -2875 3271 3139 2269 64 0 7 chr2 76175342 76175644 -174512210 - AluY SINE Alu 0 300 1 1971 193 56 30 chr2 76175644 76176003 -174511851 - L1MB7 LINE L1 -3007 3139 2791 290 65 0 22 chr2 76176003 76176049 -174511805 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 2212 104 0 0 chr2 76176049 76176329 -174511525 - AluSx SINE Alu -32 280 1 1971 193 56 30 chr2 76176329 76176419 -174511435 - L1MB7 LINE L1 -3354 2792 2667 306 312 184 13 chr2 76176555 76176789 -174511065 + L2 LINE L2 2381 2654 -660 882 219 77 5 chr2 76176998 76177194 -174510660 + MIR SINE MIR 6 215 -47 2273 101 14 0 chr2 76177311 76177607 -174510247 - AluSx SINE Alu -12 300 1 442 298 79 17 chr2 76177790 76177968 -174509886 - MIR SINE MIR 0 262 74 1179 171 5 29 chr2 76178110 76178315 -174509539 - AluJo SINE Alu -109 203 4 22 35 0 0 chr2 76178337 76178366 -174509488 + AT_rich Low_complexity Low_complexity 1 29 0 248 375 0 12 chr2 76178736 76178816 -174509038 + L2 LINE L2 3094 3172 -100 295 260 77 19 chr2 76180031 76180135 -174507719 - MIR SINE MIR -30 232 123 279 333 0 0 chr2 76180213 76180294 -174507560 + GA-rich Low_complexity Low_complexity 1 81 0 218 233 0 33 chr2 76180512 76180572 -174507282 + L2 LINE L2 3251 3308 -5 357 238 58 107 chr2 76180675 76181124 -174506730 + MER65A LTR ERV1 19 445 0 1956 152 0 19 chr2 76181278 76181587 -174506267 + AluJo SINE Alu 1 303 -9 635 297 108 13 chr2 76182047 76182392 -174505462 - L3 LINE CR1 -27 1550 1119 1105 241 20 12 chr2 76182424 76182673 -174505181 + MIR SINE MIR 2 252 -10 248 268 89 49 chr2 76182718 76182841 -174505013 - L3 LINE CR1 -550 1027 900 2068 131 3 0 chr2 76184298 76184588 -174503266 + AluSx SINE Alu 2 292 -20 627 176 30 38 chr2 76185241 76185364 -174502490 + FLAM_A SINE Alu 10 133 -178 2278 120 0 0 chr2 76185364 76185672 -174502182 + AluSc SINE Alu 1 308 -1 1250 267 61 50 chr2 76185869 76186628 -174501226 + L1M2 LINE L1 1543 2271 -4125 1847 141 28 7 chr2 76186822 76187112 -174500742 - AluSx SINE Alu -4 308 13 877 144 0 0 chr2 76187263 76187388 -174500466 + AluJ SINE Alu 1 125 -187 1035 131 51 17 chr2 76187434 76187609 -174500245 + AluJ SINE Alu 129 309 -3 2116 123 3 3 chr2 76187683 76187991 -174499863 + AluSx SINE Alu 1 308 -4 181 231 123 15 chr2 76188356 76188421 -174499433 - L2 LINE L2 -793 2521 2450 333 316 111 13 chr2 76188607 76188841 -174499013 + L1ME LINE L1 564 820 -5250 2170 136 7 0 chr2 76188964 76189274 -174498580 + AluSx SINE Alu 1 312 0 2054 105 3 3 chr2 76189440 76189726 -174498128 + AluSq SINE Alu 1 286 -27 21 0 0 0 chr2 76189726 76189747 -174498107 + AT_rich Low_complexity Low_complexity 1 21 0 1799 154 16 13 chr2 76189820 76190126 -174497728 + AluJb SINE Alu 1 307 -5 1734 141 0 4 chr2 76190126 76190381 -174497473 + AluSq SINE Alu 1 254 -59 1731 74 0 5 chr2 76190505 76190720 -174497134 - AluY SINE Alu -12 299 86 188 311 27 14 chr2 76190980 76191054 -174496800 + MER5B DNA MER1_type 1 75 -103 206 386 76 8 chr2 76192397 76192529 -174495325 + L2 LINE L2 2933 3073 -199 330 238 155 3 chr2 76192652 76192848 -174495006 - Charlie2 DNA MER1_type -2504 278 36 673 260 25 25 chr2 76192935 76193212 -174494642 + L1ME3A LINE L1 5686 5962 -208 426 293 93 0 chr2 76193359 76193509 -174494345 + MIR SINE MIR 78 241 -21 185 333 0 0 chr2 76193834 76193879 -174493975 - MIR SINE MIR -166 96 52 21 36 0 0 chr2 76194481 76194509 -174493345 + AT_rich Low_complexity Low_complexity 1 28 0 1562 182 0 30 chr2 76194546 76194842 -174493012 - AluJb SINE Alu -24 288 2 1406 188 7 88 chr2 76194843 76195253 -174492601 - L1MA5A LINE L1 -24 6273 5897 1854 146 0 55 chr2 76197255 76197584 -174490270 - AluJb SINE Alu -1 311 1 550 203 275 29 chr2 76197812 76198019 -174489835 - MIR SINE MIR 0 262 5 189 186 70 0 chr2 76198044 76198087 -174489767 - MIR SINE MIR -86 176 131 1072 115 128 78 chr2 76198229 76198447 -174489407 + AluJb SINE Alu 73 301 -11 2112 120 47 7 chr2 76198599 76198899 -174488955 + AluSx SINE Alu 1 312 0 186 351 91 0 chr2 76199176 76199253 -174488601 + L2 LINE L2 2564 2647 -667 363 333 16 24 chr2 76199263 76199386 -174488468 - L2 LINE L2 -4 3268 3147 260 284 55 47 chr2 76199636 76199763 -174488091 + L2 LINE L2 3172 3299 -14 808 163 0 22 chr2 76200022 76200157 -174487697 - FLAM_C SINE Alu -1 132 1 7978 92 22 10 chr2 76200158 76201309 -174486545 + THE1A-int LTR MaLR 417 1580 0 2765 73 3 0 chr2 76201309 76201663 -174486191 + THE1A LTR MaLR 1 355 0 2429 164 12 10 chr2 76201663 76202145 -174485709 + L1MB7 LINE L1 4561 5043 -1103 627 280 93 43 chr2 76202249 76203046 -174484808 + L1ME LINE L1 805 1641 -4755 * 3432 168 38 61 chr2 76203045 76203104 -174484750 + L1MB7 LINE L1 5434 5493 -691 1981 133 3 3 chr2 76203104 76203397 -174484457 - AluSx SINE Alu -19 293 1 3432 168 38 61 chr2 76203397 76204093 -174483761 + L1MB7 LINE L1 5493 6172 -12 565 236 129 70 chr2 76204082 76204523 -174483331 + L1ME LINE L1 1623 2089 -4307 * 1043 182 24 19 chr2 76204606 76204815 -174483039 - MER2 DNA MER2_type -135 210 1 436 284 22 14 chr2 76204816 76205038 -174482816 + L1ME LINE L1 2081 2304 -4092 1511 220 66 0 chr2 76205064 76205414 -174482440 + L1MC4 LINE L1 7529 7901 -141 308 317 31 31 chr2 76205704 76205865 -174481989 + L1ME LINE L1 5483 5643 -592 344 229 9 57 chr2 76205917 76206022 -174481832 + MER5A DNA MER1_type 10 109 -80 257 242 61 0 chr2 76206111 76206177 -174481677 + L1ME LINE L1 5750 5819 -420 852 232 132 58 chr2 76206183 76206562 -174481292 - MLT1I LTR MaLR -1 408 2 540 238 8 8 chr2 76206662 76206784 -174481070 + L2 LINE L2 3188 3309 -4 23 54 0 0 chr2 76207008 76207045 -174480809 + AT_rich Low_complexity Low_complexity 1 37 0 1806 154 6 45 chr2 76207118 76207430 -174480424 - AluSx SINE Alu -12 300 1 21 0 0 0 chr2 76207640 76207661 -174480193 + AT_rich Low_complexity Low_complexity 1 21 0 1921 178 7 52 chr2 76207897 76208285 -174479569 + MLT2D LTR ERVL 5 374 -40 378 0 0 0 chr2 76208285 76208327 -174479527 + (CA)n Simple_repeat Simple_repeat 2 43 0 1921 178 7 52 chr2 76208327 76208364 -174479490 + MLT2D LTR ERVL 374 411 -3 361 269 130 11 chr2 76209617 76209792 -174478062 + MIR SINE MIR 16 206 -56 1583 147 7 73 chr2 76209871 76210171 -174477683 - AluJo SINE Alu -30 282 3 867 257 66 44 chr2 76210174 76210536 -174477318 - L2 LINE L2 0 3313 2944 264 268 0 0 chr2 76211675 76211746 -174476108 + (CA)n Simple_repeat Simple_repeat 1 71 0 246 254 60 0 chr2 76211747 76211814 -174476040 + MER103 DNA DNA 87 157 -9 320 303 109 91 chr2 76212041 76212164 -174475690 + L3 LINE CR1 883 1002 -575 1261 181 0 18 chr2 76212164 76212390 -174475464 - MER58A DNA MER1_type -2 222 1 320 303 109 91 chr2 76212390 76212846 -174475008 + L3 LINE CR1 1002 1472 -105 698 201 28 61 chr2 76212954 76213168 -174474686 + MER112 DNA MER1_type 8 214 -46 1975 118 0 64 chr2 76213238 76213551 -174474303 + AluSx SINE Alu 1 293 -19 2080 123 7 16 chr2 76213608 76213917 -174473937 + AluSx SINE Alu 1 306 -6 1980 148 0 29 chr2 76214760 76215071 -174472783 + AluSx SINE Alu 1 302 -10 1939 155 7 0 chr2 76215277 76215567 -174472287 + AluSx SINE Alu 1 292 -20 1250 175 0 0 chr2 76216399 76216588 -174471266 + AluSx SINE Alu 1 189 -123 296 290 115 27 chr2 76216596 76216934 -174470920 - L1ME4a LINE L1 -69 6052 5685 252 300 0 9 chr2 76217314 76217424 -174470430 - L1P LINE L1 -1087 5059 4951 680 252 52 17 chr2 76217577 76217807 -174470047 - MER46C DNA MER2_type 0 338 101 261 302 52 17 chr2 76218005 76218177 -174469677 + L1M4 LINE L1 4142 4319 -1827 2569 38 0 7 chr2 76218526 76218819 -174469035 + AluY SINE Alu 1 291 -20 685 306 93 58 chr2 76219255 76219854 -174468000 + L2 LINE L2 1067 1686 -1628 679 233 0 8 chr2 76219865 76219998 -174467856 - AluSq/x SINE Alu -179 133 2 1084 303 118 42 chr2 76220094 76221061 -174466793 + L2 LINE L2 1937 2976 -338 331 243 162 0 chr2 76221132 76221243 -174466611 + L2 LINE L2 3185 3313 0 1881 153 28 64 chr2 76221445 76221805 -174466049 + MER7A DNA MER2_type 2 346 0 250 317 16 49 chr2 76222440 76222564 -174465290 + MIR SINE MIR 28 148 -60 737 181 0 23 chr2 76222709 76222842 -174465012 + FLAM_C SINE Alu 4 133 -10 315 244 106 8 chr2 76224338 76224461 -174463393 - MIR SINE MIR -57 205 71 260 324 49 0 chr2 76224524 76224626 -174463228 - MIR3 SINE MIR -15 193 87 626 287 87 28 chr2 76224836 76225090 -174462764 + MLT1L LTR MaLR 115 383 -232 525 223 25 0 chr2 76225167 76225288 -174462566 + MLT1L LTR MaLR 492 615 0 360 358 45 48 chr2 76225369 76225679 -174462175 + L2 LINE L2 2942 3250 -22 326 44 19 11 chr2 76227114 76227167 -174460687 + MADE1 DNA Mariner 3 46 -34 313 49 12 207 chr2 76227174 76227256 -174460598 + MADE1 DNA Mariner 14 79 -1 201 172 21 43 chr2 76227607 76227700 -174460154 + (TA)n Simple_repeat Simple_repeat 2 92 0 * 296 164 15 0 chr2 76227679 76227746 -174460108 + (CA)n Simple_repeat Simple_repeat 2 69 0 946 296 64 45 chr2 76228093 76228734 -174459120 + L1MEd LINE L1 246 898 -5221 3001 109 15 11 chr2 76228741 76229249 -174458605 - MER4B LTR ERV1 0 610 1 213 94 0 0 chr2 76230189 76230221 -174457633 + (TC)n Simple_repeat Simple_repeat 1 32 0 324 332 132 30 chr2 76230221 76230782 -174457072 + L2 LINE L2 1711 2384 -930 657 210 0 36 chr2 76230782 76230920 -174456934 + FLAM_A SINE Alu 1 133 0 324 332 132 30 chr2 76230920 76231181 -174456673 + L2 LINE L2 2384 2617 -697 327 229 55 37 chr2 76231435 76231544 -174456310 + L2 LINE L2 2941 3051 -221 180 0 0 0 chr2 76231599 76231619 -174456235 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 1407 137 34 0 chr2 76231640 76231844 -174456010 - AluJo SINE Alu -101 211 1 259 128 0 43 chr2 76232054 76232101 -174455753 - FLAM SINE Alu 0 133 89 293 219 109 23 chr2 76233177 76233305 -174454549 - L1MC5 LINE L1 -268 7693 7555 226 118 98 0 chr2 76233787 76233838 -174454016 - LTR33 LTR ERVL -443 78 23 1923 175 29 37 chr2 76234375 76234758 -174453096 - MLT1B LTR MaLR -4 386 7 234 380 25 0 chr2 76239011 76239132 -174448722 - MIR3 SINE MIR -26 182 59 21 0 0 0 chr2 76239831 76239852 -174448002 + AT_rich Low_complexity Low_complexity 1 21 0 227 294 90 25 chr2 76241685 76241930 -174445924 + L2 LINE L2 2242 2502 -812 257 219 48 48 chr2 76242312 76242417 -174445437 + L2 LINE L2 3183 3287 -26 306 290 104 66 chr2 76244354 76244493 -174443361 - L2 LINE L2 -456 2858 2726 1673 138 92 39 chr2 76244493 76244776 -174443078 - AluJo SINE Alu -14 298 1 306 290 104 66 chr2 76244776 76245215 -174442639 - L2 LINE L2 -588 2726 2258 2268 93 28 0 chr2 76246777 76247068 -174440786 + AluSx SINE Alu 3 301 -11 434 182 107 16 chr2 76247258 76247379 -174440475 + L1MC4 LINE L1 7911 8042 0 350 238 12 0 chr2 76247397 76247477 -174440377 + L1ME4a LINE L1 5966 6046 -75 1998 158 0 3 chr2 76247575 76247879 -174439975 + AluJo SINE Alu 1 303 -9 274 212 61 0 chr2 76248683 76248749 -174439105 - L2 LINE L2 0 3272 3203 2282 207 125 2 chr2 76249033 76249603 -174438251 - LTR65 LTR ERV1 -29 640 1 403 199 106 43 chr2 76250028 76250169 -174437685 - MER5B DNA MER1_type 0 178 29 1884 181 0 0 chr2 76250529 76250827 -174437027 - AluJo SINE Alu -14 298 1 1991 135 3 3 chr2 76250852 76251140 -174436714 - AluJo SINE Alu -22 290 3 2251 100 14 0 chr2 76251147 76251437 -174436417 - AluSq SINE Alu -19 294 1 1043 93 7 7 chr2 76251456 76251595 -174436259 - AluSq/x SINE Alu -173 139 1 711 195 84 44 chr2 76251852 76252016 -174435838 + L1MC5 LINE L1 7347 7530 -431 2473 87 0 0 chr2 76252016 76252325 -174435529 + AluSx SINE Alu 1 309 -3 711 195 84 44 chr2 76252325 76252458 -174435396 + L1MC5 LINE L1 7530 7656 -305 717 178 0 15 chr2 76252458 76252593 -174435261 + AluJo SINE Alu 1 133 -169 918 176 16 21 chr2 76252623 76252810 -174435044 + AluJo SINE Alu 118 303 -9 1901 175 99 47 chr2 76252860 76253324 -174434530 + L1MD3 LINE L1 7508 7995 0 589 261 49 35 chr2 76253331 76253557 -174434297 + L1MC5 LINE L1 7697 7925 -36 446 246 45 15 chr2 76253603 76253737 -174434117 + MIR SINE MIR 90 227 -35 677 320 59 54 chr2 76254362 76255257 -174432597 - L2 LINE L2 0 3272 2365 29 0 0 0 chr2 76256536 76256565 -174431289 + GC_rich Low_complexity Low_complexity 1 29 0 645 269 111 13 chr2 76257271 76257505 -174430349 + LTR33 LTR ERVL 238 494 -27 242 345 12 0 chr2 76257703 76257787 -174430067 - L2 LINE L2 -2161 1153 1069 305 279 8 8 chr2 76258115 76258244 -174429610 + (CA)n Simple_repeat Simple_repeat 1 129 0 269 314 142 30 chr2 76260122 76260459 -174427395 - L2 LINE L2 -813 2501 2127 340 141 311 82 chr2 76264849 76264984 -174422870 + L1ME4a LINE L1 5956 6121 0 284 296 111 9 chr2 76267960 76268068 -174419786 - L2 LINE L2 -2 3311 3193 224 344 61 8 chr2 76268082 76268213 -174419641 - MER5A DNA MER1_type -25 164 27 243 313 100 0 chr2 76268356 76268436 -174419418 - MIR3 SINE MIR -8 200 113 411 288 0 17 chr2 76269082 76269200 -174418654 - MIR SINE MIR -94 168 53 22 0 0 0 chr2 76269669 76269691 -174418163 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 76275546 76275567 -174412287 + GC_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 76276203 76276227 -174411627 + AT_rich Low_complexity Low_complexity 1 24 0 342 0 0 0 chr2 76276323 76276361 -174411493 + (TG)n Simple_repeat Simple_repeat 2 39 0 21 36 0 0 chr2 76277124 76277152 -174410702 + GC_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 76277362 76277389 -174410465 + GC_rich Low_complexity Low_complexity 1 27 0 659 97 26 32 chr2 76277737 76277891 -174409963 - MER52A LTR ERV1 -161 1594 1442 195 42 0 0 chr2 76278068 76278092 -174409762 + (CGGGG)n Simple_repeat Simple_repeat 1 24 0 839 144 0 0 chr2 76280270 76280402 -174407452 + AluJb SINE Alu 170 301 -11 230 234 109 0 chr2 76280419 76280483 -174407371 - MIR SINE MIR -107 155 85 411 298 149 11 chr2 76281337 76281518 -174406336 + MIR SINE MIR 47 252 -10 352 309 24 32 chr2 76282072 76282195 -174405659 + MIR SINE MIR 141 262 0 817 199 101 25 chr2 76282216 76282492 -174405362 + MER33 DNA MER1_type 27 323 -1 256 298 112 34 chr2 76282493 76282959 -174404895 - L1ME4a LINE L1 -46 6075 5501 254 353 94 39 chr2 76283029 76283218 -174404636 + L2 LINE L2 1963 2140 -1174 547 59 12 12 chr2 76283218 76283303 -174404551 + (TCTA)n Simple_repeat Simple_repeat 3 87 0 254 353 94 39 chr2 76283303 76283623 -174404231 + L2 LINE L2 2140 2500 -814 425 245 133 7 chr2 76283835 76283978 -174403876 + MIR SINE MIR 100 260 -2 1861 158 0 7 chr2 76284197 76284495 -174403359 + AluJo SINE Alu 1 296 -16 443 231 102 9 chr2 76284567 76284675 -174403179 + L2 LINE L2 3192 3309 -4 1265 126 0 0 chr2 76285420 76285602 -174402252 - FRAM SINE Alu 0 176 1 240 323 0 0 chr2 76286241 76286306 -174401548 + L1MEd LINE L1 7 71 -6048 * 371 259 73 73 chr2 76286294 76286457 -174401397 - L1MC4 LINE L1 0 8042 7880 288 0 0 0 chr2 76286457 76286489 -174401365 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1252 181 75 26 chr2 76286492 76286758 -174401096 - AluJo SINE Alu -30 282 4 371 259 73 73 chr2 76286758 76286849 -174401005 - L1MC4 LINE L1 -163 7879 7690 324 308 67 10 chr2 76286853 76286957 -174400897 - L1MC5 LINE L1 -35 7926 7817 444 320 98 49 chr2 76286959 76287409 -174400445 + L1MEd LINE L1 90 561 -5558 362 284 133 40 chr2 76287411 76287636 -174400218 + L1MEd LINE L1 596 841 -5278 1803 235 89 27 chr2 76287659 76287793 -174400061 + L1ME3 LINE L1 5527 5651 -511 1762 99 110 0 chr2 76287793 76288065 -174399789 + AluSq SINE Alu 1 302 -11 1803 235 89 27 chr2 76288065 76288347 -174399507 + L1ME3 LINE L1 5651 5993 -169 1567 119 36 86 chr2 76288347 76288650 -174399204 + AluJo SINE Alu 15 302 -10 1803 235 89 27 chr2 76288650 76288828 -174399026 + L1ME3 LINE L1 5993 6159 -3 505 280 99 45 chr2 76288849 76289152 -174398702 + L1MEd LINE L1 895 1180 -1310 2622 132 33 21 chr2 76289152 76289575 -174398279 + MSTC LTR MaLR 1 428 0 505 280 99 45 chr2 76289575 76289690 -174398164 + L1MEd LINE L1 1180 1287 -1203 2091 145 0 0 chr2 76289690 76290001 -174397853 + AluSx SINE Alu 1 311 -1 505 280 99 45 chr2 76290001 76290378 -174397476 + L1MEd LINE L1 1287 1629 -861 556 215 25 43 chr2 76291609 76291772 -174396082 + MIR SINE MIR 91 250 -12 2462 153 52 0 chr2 76291948 76292353 -174395501 - MSTB LTR MaLR 0 426 1 232 355 60 18 chr2 76294124 76294290 -174393564 + L2 LINE L2 2906 3078 -194 1895 104 13 45 chr2 76295255 76295563 -174392291 - AluSx SINE Alu -14 298 1 975 160 0 0 chr2 76295619 76295794 -174392060 + CT-rich Low_complexity Low_complexity 4 178 0 234 219 134 25 chr2 76295816 76295935 -174391919 - L1ME4a LINE L1 -4 6117 5986 512 247 41 23 chr2 76295946 76296144 -174391710 - MIR SINE MIR -1 261 22 294 325 60 0 chr2 76296281 76296398 -174391456 - L1ME4a LINE L1 -18 6103 5980 358 228 87 24 chr2 76296591 76296718 -174391136 + MIR3 SINE MIR 10 144 -64 234 200 0 46 chr2 76297063 76297128 -174390726 + CT-rich Low_complexity Low_complexity 1 62 0 216 0 0 0 chr2 76298029 76298053 -174389801 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 381 22 0 0 chr2 76298052 76298098 -174389756 + (CA)n Simple_repeat Simple_repeat 2 47 0 186 267 33 0 chr2 76299154 76299214 -174388640 - MIR SINE MIR -101 107 46 207 69 0 0 chr2 76299550 76299579 -174388275 + (TG)n Simple_repeat Simple_repeat 1 29 0 185 91 0 30 chr2 76299579 76299612 -174388242 + (GGGAGA)n Simple_repeat Simple_repeat 4 35 0 227 297 11 0 chr2 76299699 76299790 -174388064 + CT-rich Low_complexity Low_complexity 1 92 0 264 348 0 17 chr2 76301866 76301981 -174385873 - MIR SINE MIR -76 132 20 783 216 116 3 chr2 76302165 76302381 -174385473 - MIR SINE MIR 0 262 29 1418 121 0 0 chr2 76304563 76304761 -174383093 + AluSx SINE Alu 9 206 -106 2244 71 4 0 chr2 76304763 76305043 -174382811 + AluY SINE Alu 1 281 -30 214 39 0 0 chr2 76305043 76305069 -174382785 + (CAAA)n Simple_repeat Simple_repeat 3 116 0 209 259 0 0 chr2 76305069 76305123 -174382731 + L2 LINE L2 2704 2757 -557 316 295 84 0 chr2 76305499 76305594 -174382260 - L3 LINE CR1 -119 1458 1356 194 286 66 77 chr2 76306145 76306236 -174381618 + L2 LINE L2 3204 3293 -20 253 260 65 0 chr2 76306436 76306513 -174381341 - MIR SINE MIR -56 206 125 24 32 0 0 chr2 76308055 76308086 -174379768 + GC_rich Low_complexity Low_complexity 1 31 0 251 175 78 37 chr2 76308787 76308871 -174378983 - L1P4 LINE L1 -300 5866 5782 1088 162 11 0 chr2 76309061 76309240 -174378614 - AluJo SINE Alu -3 309 129 762 164 30 8 chr2 76309664 76309798 -174378056 - AluJo SINE Alu -174 138 2 1491 151 107 3 chr2 76309877 76310195 -174377659 + L1MC4 LINE L1 7692 8042 0 1906 116 0 0 chr2 76310214 76310481 -174377373 + AluSx SINE Alu 36 302 -10 980 181 22 0 chr2 76310484 76310693 -174377161 + L1ME1 LINE L1 5277 5503 -666 1905 134 43 69 chr2 76310698 76311132 -174376722 + THE1B LTR MaLR 3 428 0 1766 78 21 0 chr2 76311132 76311374 -174376480 + THE1B-int LTR MaLR 1 247 -1333 504 161 14 190 chr2 76312068 76312279 -174375575 - L2 LINE L2 0 3313 3140 1142 115 20 65 chr2 76312281 76312323 -174375531 + MSTD LTR MaLR 2 44 -352 1654 162 28 3 chr2 76312323 76312607 -174375247 - AluJb SINE Alu -21 291 1 1142 115 20 65 chr2 76312607 76312764 -174375090 + MSTD LTR MaLR 44 192 -204 986 160 12 6 chr2 76312764 76312933 -174374921 + AluSx SINE Alu 1 170 -142 270 247 60 30 chr2 76313226 76313461 -174374393 + L1MC4a LINE L1 4377 4618 -1528 813 203 92 33 chr2 76313544 76313879 -174373975 + L1MC4 LINE L1 7688 8042 0 2001 245 84 48 chr2 76314069 76314382 -174373472 + L1MC4a LINE L1 4904 4637 -1509 1541 129 94 0 chr2 76314382 76314637 -174373217 - AluSx SINE Alu 0 312 34 2001 245 84 48 chr2 76314637 76315434 -174372420 + L1MC4a LINE L1 4636 5403 -743 227 253 13 13 chr2 76315442 76315517 -174372337 + L1MC4a LINE L1 6099 6173 -1635 24 32 0 0 chr2 76315642 76315673 -174372181 + AT_rich Low_complexity Low_complexity 1 31 0 1351 45 6 22 chr2 76315854 76316033 -174371821 + AluY SINE Alu 120 295 -16 2150 158 50 32 chr2 76316819 76317362 -174370492 + MLT2A2 LTR ERVL 1 554 0 1266 189 8 12 chr2 76317538 76317792 -174370062 + AluJo SINE Alu 43 295 -17 1479 223 78 11 chr2 76318177 76318536 -174369318 + L1ME1 LINE L1 5680 6062 -104 666 177 146 0 chr2 76318608 76318738 -174369116 - MLT1B LTR MaLR -48 342 194 863 106 16 8 chr2 76318776 76318899 -174368955 + MER84-int LTR ERV1 2107 2230 -2724 648 103 11 0 chr2 76318899 76318986 -174368868 - AluJ/FLAM SINE Alu -220 92 5 460 133 12 0 chr2 76319018 76319101 -174368753 + L1M3 LINE L1 5476 5559 -624 3411 206 40 67 chr2 76319101 76320163 -174367691 - L1M4c LINE L1 -1944 4438 3488 1488 165 76 7 chr2 76320163 76320454 -174367400 - AluJb SINE Alu -1 311 1 3411 206 40 67 chr2 76320454 76320761 -174367093 - L1M4c LINE L1 -2894 3488 3174 234 286 119 12 chr2 76321190 76321274 -174366580 - MIR SINE MIR -61 201 109 1378 169 17 0 chr2 76321395 76321632 -174366222 + AluJo SINE Alu 1 241 -71 1122 137 36 0 chr2 76321632 76321800 -174366054 - LTR8 LTR ERV1 0 691 518 4574 163 18 53 chr2 76321800 76322670 -174365184 - L1M4c LINE L1 -3603 2779 1966 1605 169 43 0 chr2 76322670 76322949 -174364905 - AluJo SINE Alu -20 292 2 4574 163 18 53 chr2 76322949 76323270 -174364584 - L1M4c LINE L1 -4416 1966 1635 1091 172 15 5 chr2 76323275 76323478 -174364376 + MER2 DNA MER2_type 2 206 -139 942 211 0 0 chr2 76323534 76323705 -174364149 + AluJo SINE Alu 1 171 -141 2918 163 8 24 chr2 76323805 76323950 -174363904 - L1M4c LINE L1 -5855 529 383 1557 168 0 4 chr2 76323950 76324218 -174363636 - AluJb SINE Alu -12 300 34 2918 163 8 24 chr2 76324218 76324564 -174363290 - L1M4c LINE L1 -6001 383 46 5555 193 32 36 chr2 76324568 76325697 -174362157 - L1M4 LINE L1 -1150 4996 3871 1564 101 0 38 chr2 76325697 76325935 -174361919 - AluSg/x SINE Alu -2 310 82 5555 193 32 36 chr2 76325935 76326149 -174361705 - L1M4 LINE L1 -2275 3871 3658 1902 106 33 33 chr2 76326422 76326724 -174361130 + AluSx SINE Alu 1 302 -10 260 276 83 6 chr2 76327311 76327467 -174360387 + L1ME LINE L1 5696 5863 -258 230 185 37 19 chr2 76327610 76327664 -174360190 + (CATATA)n Simple_repeat Simple_repeat 1 55 0 1047 241 132 45 chr2 76327664 76328087 -174359767 + MLT1C LTR MaLR 1 460 -7 30 0 0 0 chr2 76329745 76329775 -174358079 + AT_rich Low_complexity Low_complexity 1 30 0 528 313 68 54 chr2 76329914 76330323 -174357531 + L1M4 LINE L1 2732 3146 -3000 180 111 0 0 chr2 76330671 76330698 -174357156 + (TATG)n Simple_repeat Simple_repeat 4 30 0 210 71 0 0 chr2 76330881 76330909 -174356945 + (A)n Simple_repeat Simple_repeat 1 28 0 2385 128 11 11 chr2 76330950 76331325 -174356529 + THE1C LTR MaLR 1 375 0 417 269 109 13 chr2 76331343 76331529 -174356325 - MIR SINE MIR -15 247 45 189 0 0 0 chr2 76331666 76331687 -174356167 + (T)n Simple_repeat Simple_repeat 1 21 0 230 0 0 32 chr2 76332149 76332180 -174355674 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1812 138 4 4 chr2 76332185 76332461 -174355393 - AluSx SINE Alu -36 276 1 1111 186 14 32 chr2 76332520 76332741 -174355113 + AluJo SINE Alu 84 300 -12 2558 177 70 29 chr2 76332741 76333328 -174354526 + L1MB8 LINE L1 5323 5933 -251 368 169 0 0 chr2 76333428 76333493 -174354361 + L1MB8 LINE L1 6114 6178 0 488 249 85 18 chr2 76333610 76333775 -174354079 - HAL1 LINE L1 -1553 954 779 319 292 92 0 chr2 76333908 76334028 -174353826 - HAL1 LINE L1 -1786 721 591 235 215 21 86 chr2 76334119 76334212 -174353642 + MIR SINE MIR 120 206 -56 1745 156 69 80 chr2 76334601 76335038 -174352816 + MSTB1 LTR MaLR 1 432 0 412 304 157 21 chr2 76335155 76335435 -174352419 - L2 LINE L2 -621 2693 2376 570 306 151 23 chr2 76335436 76336057 -174351797 - L2 LINE L2 0 3313 2556 1107 199 20 4 chr2 76336843 76337089 -174350765 + L1MD3 LINE L1 6867 7116 -879 300 266 0 32 chr2 76337089 76337183 -174350671 + MLT1F1 LTR MaLR 35 125 -442 2584 203 40 16 chr2 76337183 76337760 -174350094 + L1MD3 LINE L1 7404 7994 -1 2188 118 3 0 chr2 76337772 76338077 -174349777 + AluSx SINE Alu 3 308 -4 602 185 30 30 chr2 76338097 76338232 -174349622 - L1MC4a LINE L1 -1965 5843 5709 750 152 72 0 chr2 76338243 76338368 -174349486 + AluJo SINE Alu 2 135 -177 956 237 24 100 chr2 76338435 76338706 -174349148 - L1MC4a LINE L1 -2126 5682 5445 1775 155 3 7 chr2 76338706 76339009 -174348845 - AluJo SINE Alu -10 302 1 956 237 24 100 chr2 76339009 76339108 -174348746 - L1MC4a LINE L1 -2363 5445 5340 1643 177 0 10 chr2 76339149 76339448 -174348406 + AluJo SINE Alu 1 296 -16 1053 271 51 33 chr2 76340275 76340611 -174347243 + MER115 DNA AcHobo 15 356 -337 951 244 65 0 chr2 76340647 76340877 -174346977 + MER115 DNA AcHobo 438 682 -11 402 151 0 0 chr2 76341081 76341154 -174346700 + L1PA13 LINE L1 6090 6162 -1 207 0 0 0 chr2 76341234 76341257 -174346597 + (A)n Simple_repeat Simple_repeat 1 23 0 380 238 111 39 chr2 76341285 76341388 -174346466 - MLT1L LTR MaLR -302 209 114 452 222 96 22 chr2 76341439 76341574 -174346280 + MER5B DNA MER1_type 4 148 -30 1650 162 26 32 chr2 76341594 76341902 -174345952 - AluJb SINE Alu -3 309 4 227 143 48 0 chr2 76341915 76341957 -174345897 - L1MB4 LINE L1 -5 6175 6132 2468 250 162 20 chr2 76342294 76343309 -174344545 + L2 LINE L2 2109 3310 -3 2406 173 58 23 chr2 76343438 76343925 -174343929 + MLT1D LTR MaLR 1 504 -1 600 287 159 25 chr2 76343998 76344063 -174343791 + L2 LINE L2 1465 1520 -1794 1776 214 91 30 chr2 76344063 76344525 -174343329 - MER110 LTR ERV1 0 491 2 600 287 159 25 chr2 76344525 76344780 -174343074 + L2 LINE L2 1520 1828 -1486 542 309 33 40 chr2 76344758 76345033 -174342821 + L2 LINE L2 2823 3095 -218 * 1650 165 31 9 chr2 76345057 76345379 -174342475 - L1MB3 LINE L1 -3 6180 5852 226 263 0 40 chr2 76346238 76346314 -174341540 + L2 LINE L2 3019 3091 -181 180 182 218 18 chr2 76346662 76346717 -174341137 + MIR3 SINE MIR 112 177 -31 234 182 109 0 chr2 76346855 76346910 -174340944 - MIR SINE MIR -19 243 183 207 103 0 26 chr2 76347668 76347707 -174340147 - L2 LINE L2 -213 3059 3022 292 252 125 0 chr2 76348897 76348995 -174338859 - MIR3 SINE MIR -48 160 51 21 0 0 0 chr2 76349249 76349270 -174338584 + GC_rich Low_complexity Low_complexity 1 21 0 462 266 48 0 chr2 76350525 76350649 -174337205 + MIR SINE MIR 44 173 -89 212 308 148 33 chr2 76351034 76351216 -174336638 + L2 LINE L2 2139 2341 -973 231 259 0 0 chr2 76351911 76351965 -174335889 + L3b LINE CR1 1327 1380 -203 320 339 40 17 chr2 76352293 76352467 -174335387 + MIR3 SINE MIR 24 201 -7 462 269 146 24 chr2 76354111 76354487 -174333367 + L2 LINE L2 2221 2642 -672 200 330 44 11 chr2 76354953 76355044 -174332810 + L2 LINE L2 3208 3301 -12 282 282 88 50 chr2 76356404 76356585 -174331269 - MER5A DNA MER1_type -1 188 1 223 273 15 0 chr2 76356639 76356705 -174331149 + MIR SINE MIR 196 262 0 237 237 133 67 chr2 76358439 76358574 -174329280 - MIR3 SINE MIR -62 146 3 4438 108 45 69 chr2 76358888 76359688 -174328166 + LTR1 LTR ERV1 5 785 0 1872 216 38 42 chr2 76359813 76360285 -174327569 + MER70A LTR ERVL 1 470 -2 503 317 75 0 chr2 76360987 76361173 -174326681 + MIR SINE MIR 2 201 -61 984 250 76 0 chr2 76361183 76361471 -174326383 - L2 LINE L2 0 3313 3004 308 271 21 52 chr2 76361888 76361984 -174325870 - MIR SINE MIR -77 185 93 423 0 0 0 chr2 76362094 76362141 -174325713 + (CA)n Simple_repeat Simple_repeat 2 48 0 180 111 0 0 chr2 76362357 76362384 -174325470 + (CCCCCT)n Simple_repeat Simple_repeat 5 31 0 385 158 24 0 chr2 76362680 76362762 -174325092 + CT-rich Low_complexity Low_complexity 1 84 0 2218 110 0 16 chr2 76362762 76363079 -174324775 - AluSx SINE Alu 0 312 1 2111 108 3 7 chr2 76363361 76363666 -174324188 - AluSx SINE Alu -8 304 1 2052 116 7 0 chr2 76364665 76364958 -174322896 - AluSq SINE Alu -18 295 1 446 260 31 8 chr2 76366154 76366281 -174321573 - MIR3 SINE MIR -19 189 60 946 200 47 33 chr2 76367298 76367513 -174320341 + MER20 DNA MER1_type 1 218 -1 238 240 0 0 chr2 76368808 76368858 -174318996 + GA-rich Low_complexity Low_complexity 1 50 0 186 133 0 0 chr2 76369054 76369084 -174318770 + (GA)n Simple_repeat Simple_repeat 1 30 0 328 290 73 86 chr2 76369488 76369791 -174318063 + HsTC2 DNA Tc2 1 299 -1599 * 332 222 59 10 chr2 76369773 76369869 -174317985 + HsTC2 DNA Tc2 468 566 -1332 414 219 21 0 chr2 76369877 76369973 -174317881 + L1ME4a LINE L1 5665 5762 -2046 318 264 61 122 chr2 76369974 76370269 -174317585 + L1ME4a LINE L1 5845 6121 0 528 332 91 24 chr2 76370269 76370609 -174317245 + HsTC2 DNA Tc2 527 889 -1009 670 235 251 32 chr2 76370935 76371311 -174316543 + MLT1L LTR MaLR 143 573 -15 307 313 133 0 chr2 76371319 76371447 -174316407 + L1ME4a LINE L1 5266 5410 -711 307 288 58 60 chr2 76371481 76371666 -174316188 - L1M4 LINE L1 -861 5285 5099 2070 128 7 0 chr2 76371666 76371972 -174315882 + AluSx SINE Alu 5 312 0 307 288 58 60 chr2 76371972 76372152 -174315702 - L1M4 LINE L1 -1047 5099 4920 * 360 308 81 37 chr2 76372143 76372240 -174315614 + L1MC4a LINE L1 5365 5456 -714 2410 90 0 0 chr2 76372240 76372552 -174315302 - AluSx SINE Alu 0 312 1 360 308 81 37 chr2 76372552 76372727 -174315127 + L1MC4a LINE L1 5456 5649 -521 267 295 53 11 chr2 76372742 76372837 -174315017 + MER5A DNA MER1_type 86 184 -5 324 284 153 31 chr2 76372838 76373092 -174314762 + L1MC4a LINE L1 5642 5926 -1882 2217 113 0 0 chr2 76373321 76373623 -174314231 + AluSx SINE Alu 1 302 -10 367 299 54 76 chr2 76373633 76373857 -174313997 + L1ME4a LINE L1 5783 6001 -120 186 227 0 0 chr2 76374084 76374128 -174313726 + CT-rich Low_complexity Low_complexity 4 47 0 270 268 52 10 chr2 76374150 76374247 -174313607 - HAL1 LINE L1 -27 2480 2380 244 304 14 0 chr2 76374945 76375014 -174312840 - L2 LINE L2 -3 3269 3200 785 322 102 28 chr2 76375186 76375646 -174312208 - L3 LINE CR1 -534 1043 550 303 28 0 0 chr2 76375935 76375971 -174311883 + (TG)n Simple_repeat Simple_repeat 1 36 0 248 346 67 10 chr2 76376115 76376219 -174311635 - MIR SINE MIR -65 197 88 470 338 79 37 chr2 76376451 76376883 -174310971 - L2 LINE L2 0 3272 2823 186 227 61 15 chr2 76379843 76379909 -174307945 - MIR SINE MIR -80 128 60 1749 190 85 37 chr2 76380921 76381072 -174306782 - Charlie4a DNA MER1_type -1466 495 353 1979 112 30 13 chr2 76381072 76381376 -174306478 - AluSc SINE Alu 0 309 1 1749 190 85 37 chr2 76381376 76381444 -174306410 - Charlie4a DNA MER1_type -1608 353 290 2111 126 3 3 chr2 76381444 76381754 -174306100 + AluSg SINE Alu 1 310 0 1749 190 85 37 chr2 76381754 76381990 -174305864 - Charlie4a DNA MER1_type -1671 290 17 315 130 0 0 chr2 76382567 76382621 -174305233 + (CA)n Simple_repeat Simple_repeat 2 55 0 209 337 92 5 chr2 76383088 76383284 -174304570 + L2 LINE L2 2827 3039 -233 * 490 253 124 38 chr2 76383268 76383454 -174304400 + MIR SINE MIR 49 250 -12 249 264 11 46 chr2 76383500 76383587 -174304267 + L2 LINE L2 3189 3272 0 553 255 63 42 chr2 76384501 76384740 -174303114 - MIR SINE MIR -13 249 6 352 194 83 19 chr2 76386671 76386779 -174301075 + L2 LINE L2 2594 2708 -606 331 342 161 0 chr2 76387216 76387459 -174300395 + ERVL LTR ERVL 4030 4311 -1453 268 229 21 6 chr2 76388134 76388237 -174299617 + MIR SINE MIR 100 262 0 1416 150 5 0 chr2 76390468 76390688 -174297166 - AluJb SINE Alu -6 306 86 300 317 20 10 chr2 76391233 76391334 -174296520 + L1ME4a LINE L1 5756 5857 -264 543 224 121 0 chr2 76391392 76391508 -174296346 - FLAM_A SINE Alu -3 130 1 2211 95 3 13 chr2 76391543 76391858 -174295996 - AluSx SINE Alu 0 312 1 1098 144 24 0 chr2 76391858 76392025 -174295829 - FAM SINE Alu -4 171 1 357 262 12 0 chr2 76394594 76394678 -174293176 - MER81 DNA DNA -1 113 29 412 321 76 46 chr2 76395702 76395939 -174291915 + L1ME4a LINE L1 5870 6113 -8 220 195 0 0 chr2 76396180 76396221 -174291633 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr2 76396686 76396707 -174291147 + AT_rich Low_complexity Low_complexity 1 21 0 262 319 101 41 chr2 76396786 76396955 -174290899 + MIR3 SINE MIR 8 186 -22 328 308 83 41 chr2 76397954 76398123 -174289731 - MIR SINE MIR -66 196 21 333 0 0 0 chr2 76398281 76398318 -174289536 + (CA)n Simple_repeat Simple_repeat 1 37 0 217 349 38 8 chr2 76399094 76399226 -174288628 + MIR SINE MIR 8 127 -81 527 309 58 10 chr2 76399343 76399550 -174288304 + MIR SINE MIR 40 256 -6 546 305 92 39 chr2 76399893 76400250 -174287604 + MLT1H LTR MaLR 2 377 -172 1927 120 7 27 chr2 76400308 76400608 -174287246 + AluSq SINE Alu 4 297 -16 335 283 9 35 chr2 76401348 76401461 -174286393 + L2 LINE L2 2964 3073 -199 989 237 103 111 chr2 76404089 76404586 -174283268 + MLT1J LTR MaLR 19 511 0 775 307 113 53 chr2 76404588 76405070 -174282784 + L1MC/D LINE L1 2725 3240 -2906 1632 144 0 4 chr2 76405070 76405320 -174282534 - AluJo SINE Alu -63 249 1 775 307 113 53 chr2 76405320 76405342 -174282512 + L1MC/D LINE L1 3240 3259 -2887 557 291 100 23 chr2 76405360 76405953 -174281901 + L1MC/D LINE L1 5106 5752 -744 495 0 0 0 chr2 76406615 76406670 -174281184 + (CA)n Simple_repeat Simple_repeat 2 56 0 429 310 96 67 chr2 76407188 76407372 -174280482 + L1M4 LINE L1 2204 2381 -3765 342 0 0 0 chr2 76407372 76407410 -174280444 + (TG)n Simple_repeat Simple_repeat 2 39 0 429 310 96 67 chr2 76407410 76407631 -174280223 + L1M4 LINE L1 2381 2621 -3525 30 45 0 0 chr2 76407639 76407683 -174280171 + AT_rich Low_complexity Low_complexity 1 44 0 550 277 70 8 chr2 76407934 76408176 -174279678 - L1ME3A LINE L1 -222 5948 5692 1569 263 138 59 chr2 76408196 76409449 -174278405 - L1ME3A LINE L1 -1163 4983 3603 898 133 0 22 chr2 76409449 76409584 -174278270 - FLAM_C SINE Alu 0 133 2 1569 263 138 59 chr2 76409584 76409753 -174278101 - L1ME3A LINE L1 -2543 3603 3449 1030 154 0 6 chr2 76409756 76409925 -174277929 + FRAM SINE Alu 1 168 -8 418 266 65 13 chr2 76409939 76410168 -174277686 - L1ME3A LINE L1 -2703 3443 3203 * 750 222 127 18 chr2 76410167 76410388 -174277466 + L1MC4a LINE L1 5635 5879 -1929 1885 125 7 0 chr2 76410389 76410691 -174277163 + AluSx SINE Alu 1 304 0 1340 201 175 6 chr2 76410747 76411096 -174276758 - MER47B DNA MER2_type 0 418 11 2266 220 110 100 chr2 76411104 76411909 -174275945 + L1MC4a LINE L1 5900 6722 -1086 1515 168 36 14 chr2 76411909 76412189 -174275665 + AluJo SINE Alu 23 308 -4 2266 220 110 100 chr2 76412189 76412542 -174275312 + L1MC4a LINE L1 6722 7070 -738 734 249 17 11 chr2 76412567 76412843 -174275011 - L1MC4a LINE L1 -408 5758 5542 1714 208 51 7 chr2 76412890 76413303 -174274551 + L1ME3A LINE L1 5636 6066 -104 243 114 0 0 chr2 76413308 76413343 -174274511 + tRNA-Phe-TTC tRNA tRNA 1 35 -41 2426 68 0 0 chr2 76413384 76413693 -174274161 - AluY SINE Alu -2 309 1 376 207 49 0 chr2 76413695 76413777 -174274077 + L1ME3A LINE L1 6077 6162 -8 1957 109 0 4 chr2 76415194 76415468 -174272386 + AluSx SINE Alu 29 301 -11 199 318 165 0 chr2 76416820 76416905 -174270949 + L2 LINE L2 3200 3298 -15 228 265 0 0 chr2 76417420 76417469 -174270385 + MER5B DNA MER1_type 1 49 -129 407 216 94 12 chr2 76417617 76417756 -174270098 + MIR SINE MIR 100 252 -10 302 231 82 37 chr2 76417909 76418043 -174269811 - MER104 DNA Tc2 -3 177 38 1796 80 0 0 chr2 76418059 76418285 -174269569 - AluSg SINE Alu -84 226 1 1552 169 14 3 chr2 76418338 76418634 -174269220 + AluJo SINE Alu 1 299 -13 262 237 61 92 chr2 76419281 76419412 -174268442 + L2 LINE L2 3142 3268 -4 850 204 69 100 chr2 76420010 76420090 -174267764 + MER45C DNA AcHobo 2 83 -870 2003 96 0 11 chr2 76420090 76420371 -174267483 - AluSx SINE Alu -11 301 24 850 204 69 100 chr2 76420371 76420406 -174267448 + MER45C DNA AcHobo 83 118 -835 6503 128 73 28 chr2 76420406 76420679 -174267175 + Tigger3b DNA MER2_type 1 260 -2768 2283 93 6 0 chr2 76420679 76420990 -174266864 - AluSq SINE Alu 0 313 1 6503 128 73 28 chr2 76420990 76421616 -174266238 + Tigger3b DNA MER2_type 260 968 -2060 1876 142 3 7 chr2 76421616 76421925 -174265929 - AluJo SINE Alu -4 308 1 6503 128 73 28 chr2 76421925 76422202 -174265652 + Tigger3b DNA MER2_type 968 1231 0 850 204 69 100 chr2 76422202 76422345 -174265509 + MER45C DNA AcHobo 118 253 -700 881 266 73 36 chr2 76422379 76422653 -174265201 + MER45C DNA AcHobo 670 953 0 334 232 170 18 chr2 76422728 76422840 -174265014 + HAL1 LINE L1 911 1039 -1468 321 256 47 0 chr2 76422849 76422935 -174264919 + MIR SINE MIR 55 144 -118 532 226 23 8 chr2 76422972 76423105 -174264749 + MLT1J2 LTR MaLR 51 185 -265 281 296 23 0 chr2 76423208 76423296 -174264558 + MLT1J2 LTR MaLR 360 449 -1 188 325 39 0 chr2 76423501 76423578 -174264276 - MIR SINE MIR -90 118 39 689 144 4 212 chr2 76423632 76423753 -174264101 - MIR SINE MIR -64 198 148 1784 166 3 3 chr2 76423753 76424061 -174263793 + AluJb SINE Alu 1 308 -4 689 144 4 212 chr2 76424061 76424175 -174263679 - MIR SINE MIR -114 148 12 295 253 101 0 chr2 76424207 76424286 -174263568 - L1MC4a LINE L1 -1906 5902 5816 189 107 0 0 chr2 76424314 76424342 -174263512 + (TA)n Simple_repeat Simple_repeat 2 29 0 756 138 73 0 chr2 76424342 76424465 -174263389 - FLAM_C SINE Alu -10 133 2 1206 179 18 0 chr2 76424503 76424682 -174263172 - L1MB3 LINE L1 -72 6111 5933 249 153 12 106 chr2 76424682 76424767 -174263087 - L1ME3A LINE L1 -242 5928 5852 850 245 103 65 chr2 76425137 76425505 -174262349 + MLT1J2 LTR MaLR 69 450 0 218 294 98 29 chr2 76425741 76425843 -174262011 + MIR SINE MIR 38 146 -62 532 253 89 0 chr2 76427012 76427158 -174260696 + MIR SINE MIR 39 197 -65 1574 240 60 58 chr2 76427165 76427754 -174260100 - L2 LINE L2 0 3313 2728 1083 181 23 9 chr2 76427754 76427970 -174259884 + MER20 DNA MER1_type 1 219 0 1574 240 60 58 chr2 76427970 76428103 -174259751 - L2 LINE L2 -585 2728 2597 251 368 68 8 chr2 76428658 76428908 -174258946 + L2 LINE L2 2611 2875 -439 613 280 58 39 chr2 76428954 76429161 -174258693 + MIR SINE MIR 46 256 -6 2283 101 0 0 chr2 76429454 76429760 -174258094 - AluSx SINE Alu -6 306 1 1880 229 103 21 chr2 76431339 76431902 -174255952 + HAL1 LINE L1 1159 1767 -740 2820 139 8 28 chr2 76431981 76432450 -174255404 - Tigger3(Golem) DNA MER2_type -1 3028 2569 791 149 108 20 chr2 76432450 76432598 -174255256 + FRAM SINE Alu 1 153 -23 1228 85 108 31 chr2 76432598 76432856 -174254998 - Tigger3(Golem) DNA MER2_type -468 2561 2284 568 163 0 122 chr2 76432856 76432900 -174254954 - Tigger3(Golem) DNA MER2_type -1123 108 60 2063 111 0 3 chr2 76432900 76433188 -174254666 - AluSx SINE Alu -25 287 1 568 163 0 122 chr2 76433188 76433266 -174254588 - Tigger3(Golem) DNA MER2_type -1171 60 1 748 227 101 105 chr2 76433281 76433737 -174254117 + HAL1 LINE L1 1978 2434 -73 360 0 0 0 chr2 76433737 76433777 -174254077 + (TTTTA)n Simple_repeat Simple_repeat 3 42 0 1992 108 7 3 chr2 76433784 76434071 -174253783 - AluSq SINE Alu -25 288 1 748 227 101 105 chr2 76434071 76434130 -174253724 + HAL1 LINE L1 2440 2499 -8 1135 179 63 0 chr2 76434393 76434583 -174253271 + MER63A DNA MER1_type 1 202 -8 242 202 83 24 chr2 76435060 76435144 -174252710 + L1MC4 LINE L1 5798 5886 -1922 1811 109 91 0 chr2 76435370 76435644 -174252210 + AluSg SINE Alu 1 299 -11 1675 183 13 7 chr2 76435660 76435961 -174251893 - AluJb SINE Alu -9 303 1 428 250 114 0 chr2 76436151 76436291 -174251563 + L1ME3A LINE L1 5674 5829 -341 2217 113 0 0 chr2 76436293 76436603 -174251251 + AluSg SINE Alu 1 310 0 975 165 0 0 chr2 76436603 76436761 -174251093 + AluJb SINE Alu 134 291 -21 1512 148 80 8 chr2 76436763 76437057 -174250797 + AluSx SINE Alu 1 313 0 220 255 57 9 chr2 76437845 76437920 -174249934 - MIR SINE MIR -107 101 26 255 240 73 42 chr2 76439106 76439202 -174248652 - MIR SINE MIR -131 131 33 2144 117 0 0 chr2 76440087 76440385 -174247469 + AluSx SINE Alu 1 298 -14 559 149 21 11 chr2 76440515 76440609 -174247245 + AluJb SINE Alu 159 253 -59 201 167 0 0 chr2 76440806 76440842 -174247012 + T-rich Low_complexity Low_complexity 1 36 0 274 206 0 61 chr2 76440879 76440905 -174246949 + L1MC4 LINE L1 6581 6607 -1435 2222 89 23 0 chr2 76440905 76441207 -174246647 + AluSg SINE Alu 1 309 -1 274 206 0 61 chr2 76441207 76441311 -174246543 + L1MC4 LINE L1 6607 6703 -1339 294 206 0 0 chr2 76441311 76441374 -174246480 + (TA)n Simple_repeat Simple_repeat 1 63 0 2342 130 28 0 chr2 76441410 76441764 -174246090 + THE1B LTR MaLR 1 364 0 442 247 154 24 chr2 76441773 76442020 -174245834 + L1ME4a LINE L1 5603 5881 -240 259 274 0 28 chr2 76442062 76442168 -174245686 + (TA)n Simple_repeat Simple_repeat 1 103 0 2085 110 21 0 chr2 76442185 76442476 -174245378 - AluSx SINE Alu -15 297 1 286 227 0 45 chr2 76442505 76442593 -174245261 + L1ME4a LINE L1 5988 6071 -50 303 302 12 23 chr2 76442613 76442699 -174245155 - L1MC4a LINE L1 -460 7348 7264 * 382 252 92 0 chr2 76442696 76442815 -174245039 - L1ME LINE L1 -399 5722 5593 * 470 286 22 17 chr2 76442807 76442985 -174244869 - L1MC4 LINE L1 -698 7344 7166 1426 174 64 52 chr2 76443043 76443236 -174244618 - MLT1A1 LTR MaLR -17 348 148 1658 140 61 11 chr2 76443236 76443515 -174244339 - AluJb SINE Alu -19 293 1 1426 174 64 52 chr2 76443515 76443665 -174244189 - MLT1A1 LTR MaLR -217 148 1 4481 220 98 90 chr2 76443670 76444348 -174243506 - MLT1A1-int LTR MaLR -6 1645 974 276 30 0 0 chr2 76444348 76444381 -174243473 + (CA)n Simple_repeat Simple_repeat 1 33 0 4481 220 98 90 chr2 76444381 76445217 -174242637 - MLT1A1-int LTR MaLR -677 974 114 2314 84 0 0 chr2 76445217 76445515 -174242339 - AluSg1 SINE Alu -11 298 1 4481 220 98 90 chr2 76445515 76445630 -174242224 - MLT1A1-int LTR MaLR -1537 114 1 1131 163 151 51 chr2 76445630 76445961 -174241893 - MLT1A1 LTR MaLR 0 365 2 1718 221 125 8 chr2 76445962 76446299 -174241555 - L1MC4a LINE L1 -831 6977 6560 435 38 0 0 chr2 76446299 76446352 -174241502 + (TG)n Simple_repeat Simple_repeat 1 53 0 1718 221 125 8 chr2 76446352 76446517 -174241337 - L1MC4a LINE L1 -1248 6560 6416 2036 125 13 0 chr2 76446855 76447158 -174240696 + AluSx SINE Alu 1 307 -5 707 248 77 34 chr2 76449242 76449476 -174238378 + MIR SINE MIR 16 259 -3 378 182 0 0 chr2 76449479 76449545 -174238309 + AluJ/FLAM SINE Alu 1 66 -236 2058 89 6 62 chr2 76449545 76449869 -174237985 - AluY SINE Alu 0 311 6 1490 141 8 0 chr2 76449878 76450119 -174237735 + AluSx SINE Alu 64 306 -6 860 130 0 0 chr2 76450187 76450310 -174237544 + AluSq SINE Alu 131 253 -60 595 146 102 0 chr2 76450430 76450567 -174237287 + AluSg/x SINE Alu 141 291 -18 2201 106 6 0 chr2 76450576 76450887 -174236967 + AluSp SINE Alu 1 313 0 3267 173 31 54 chr2 76450898 76451316 -174236538 + L1ME1 LINE L1 5448 5874 -292 1480 194 10 7 chr2 76451316 76451609 -174236245 - AluJb SINE Alu -18 294 1 3267 173 31 54 chr2 76451609 76451817 -174236037 + L1ME1 LINE L1 5874 6059 -107 1875 137 67 22 chr2 76451817 76452174 -174235680 + THE1C LTR MaLR 3 375 0 3267 173 31 54 chr2 76452174 76452251 -174235603 + L1ME1 LINE L1 6059 6136 -30 233 258 113 65 chr2 76452377 76452501 -174235353 + MIR SINE MIR 92 221 -41 213 170 0 43 chr2 76452514 76452561 -174235293 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 536 203 203 53 chr2 76453987 76454214 -174233640 + L1ME4a LINE L1 5628 5888 -233 730 206 16 33 chr2 76454272 76454451 -174233403 + L1MC4 LINE L1 6667 6941 -952 1323 250 41 37 chr2 76454469 76454869 -174232985 + L1MC4 LINE L1 7403 7807 -235 2099 92 7 13 chr2 76454869 76455172 -174232682 - AluSc SINE Alu -8 301 1 1323 250 41 37 chr2 76455172 76455207 -174232647 + L1MC4 LINE L1 7807 7840 -202 34 0 0 0 chr2 76455253 76455287 -174232567 + AT_rich Low_complexity Low_complexity 1 34 0 221 333 49 10 chr2 76457074 76457176 -174230678 + L2 LINE L2 3197 3302 -11 192 236 171 65 chr2 76457713 76457836 -174230018 + L2 LINE L2 3161 3296 -17 282 116 0 0 chr2 76460399 76460442 -174227412 + (CCTG)n Simple_repeat Simple_repeat 3 45 0 350 300 167 50 chr2 76461019 76461199 -174226655 + L2 LINE L2 1459 1617 -1697 467 142 104 75 chr2 76461199 76461305 -174226549 + MER81 DNA DNA 4 112 -2 350 300 167 50 chr2 76461305 76461680 -174226174 + L2 LINE L2 1617 2079 -1235 209 292 0 28 chr2 76461736 76461808 -174226046 + L2 LINE L2 2230 2299 -1015 443 269 66 24 chr2 76462253 76462420 -174225434 + L2 LINE L2 2936 3109 -163 218 260 240 50 chr2 76463227 76463327 -174224527 + L2 LINE L2 3137 3255 -17 327 49 0 0 chr2 76465723 76465764 -174222090 + (TCC)n Simple_repeat Simple_repeat 1 41 0 225 196 0 0 chr2 76466112 76466163 -174221691 + (CGG)n Simple_repeat Simple_repeat 2 52 0 1691 120 120 0 chr2 76466673 76466940 -174220914 - AluSg SINE Alu -11 299 1 305 368 203 0 chr2 76469192 76469537 -174218317 - L3 LINE CR1 -9 1568 1154 317 43 21 0 chr2 76474606 76474653 -174213201 + (CA)n Simple_repeat Simple_repeat 2 49 0 301 349 85 12 chr2 76474746 76474968 -174212886 - MIR SINE MIR -11 251 13 3731 199 42 5 chr2 76475057 76475795 -174212059 + L1MC2 LINE L1 5580 6344 0 475 283 254 10 chr2 76475795 76476106 -174211748 + HAL1 LINE L1 1247 1633 -874 282 56 0 0 chr2 76476166 76476202 -174211652 + (CA)n Simple_repeat Simple_repeat 1 36 0 264 265 12 0 chr2 76477103 76477186 -174210668 + HAL1b LINE L1 1256 1339 -9 2182 130 0 0 chr2 76478730 76479037 -174208817 + AluSx SINE Alu 1 307 -5 182 339 104 35 chr2 76479340 76479455 -174208399 + MER5A DNA MER1_type 16 138 -51 244 243 316 15 chr2 76480241 76480377 -174207477 - MER5A DNA MER1_type 0 189 13 630 301 136 0 chr2 76480426 76480639 -174207215 - MIR SINE MIR -16 246 5 288 273 98 16 chr2 76481436 76481630 -174206224 + L2 LINE L2 2443 2652 -662 463 301 84 34 chr2 76481700 76481922 -174205932 + L2 LINE L2 2853 3089 -224 2239 95 7 0 chr2 76481922 76482226 -174205628 - AluSp SINE Alu -7 306 1 463 301 84 34 chr2 76482226 76482242 -174205612 + L2 LINE L2 3089 3103 -210 308 269 9 46 chr2 76482828 76482936 -174204918 - MIR SINE MIR -3 259 156 628 231 127 38 chr2 76482954 76483100 -174204754 + MIR SINE MIR 13 185 -77 1067 158 129 0 chr2 76483100 76483309 -174204545 + MER46A DNA MER2_type 1 236 0 628 231 127 38 chr2 76483309 76483374 -174204480 + MIR SINE MIR 185 243 -19 429 288 68 0 chr2 76483390 76483522 -174204332 - MIR SINE MIR -120 142 2 1041 207 75 28 chr2 76483628 76483926 -174203928 + Charlie4a DNA MER1_type 36 355 -1606 2076 106 0 0 chr2 76483926 76484209 -174203645 - AluSq SINE Alu 0 313 31 1041 207 75 28 chr2 76484209 76484268 -174203586 + Charlie4a DNA MER1_type 355 410 -98 2232 118 0 13 chr2 76485300 76485615 -174202239 - AluSx SINE Alu -1 311 1 750 115 66 0 chr2 76485682 76485804 -174202050 - AluSg/x SINE Alu 0 309 180 328 247 46 82 chr2 76486243 76486437 -174201417 + L1MC5 LINE L1 7551 7737 -224 339 234 91 0 chr2 76487698 76487775 -174200079 + MIR SINE MIR 30 113 -95 360 304 43 13 chr2 76488430 76488603 -174199251 + MIR SINE MIR 56 237 -25 2073 95 36 0 chr2 76489185 76489488 -174198366 + AluSx SINE Alu 1 313 0 180 115 0 0 chr2 76490900 76490926 -174196928 - L2 LINE L2 -21 3292 3267 390 284 13 45 chr2 76490960 76491115 -174196739 - MIR SINE MIR -1 261 112 383 281 158 20 chr2 76491200 76491492 -174196362 - HAL1 LINE L1 -7 2500 2169 3580 116 29 14 chr2 76491506 76492025 -174195829 + MER1A DNA MER1_type 1 527 0 328 239 69 69 chr2 76492303 76492433 -174195421 + MIR SINE MIR 37 166 -96 1967 141 0 3 chr2 76492433 76492730 -174195124 + AluSx SINE Alu 1 296 -16 2075 137 0 0 chr2 76492733 76493039 -174194815 + AluSx SINE Alu 1 306 -6 228 269 54 0 chr2 76493040 76493133 -174194721 - L1ME4a LINE L1 -91 6030 5933 319 305 43 50 chr2 76493254 76493268 -174194586 - MIR SINE MIR -58 204 191 225 0 0 0 chr2 76493268 76493293 -174194561 + (CA)n Simple_repeat Simple_repeat 2 26 0 319 305 43 50 chr2 76493293 76493419 -174194435 - MIR SINE MIR -71 191 65 192 273 45 0 chr2 76493494 76493560 -174194294 - MIR SINE MIR -89 173 105 577 275 20 7 chr2 76494368 76494517 -174193337 + MIR SINE MIR 36 186 -76 251 201 112 22 chr2 76494591 76494725 -174193129 - L1ME4a LINE L1 -918 5441 5296 1585 184 74 11 chr2 76494784 76495067 -174192787 + AluJb SINE Alu 1 301 -11 2405 59 7 7 chr2 76495067 76495374 -174192480 + AluY SINE Alu 1 307 -4 1979 143 3 13 chr2 76495407 76495722 -174192132 - AluSx SINE Alu 0 312 1 1443 191 0 57 chr2 76495753 76496068 -174191786 + AluJb SINE Alu 1 297 -15 3548 201 27 65 chr2 76496356 76497307 -174190547 - LTR5 LTR ERVK 0 969 55 4359 188 48 12 chr2 76497309 76497554 -174190300 + L1M4 LINE L1 4135 4370 -1814 2274 70 0 7 chr2 76497554 76497882 -174189972 - AluY SINE Alu 0 326 1 4359 188 48 12 chr2 76497882 76497951 -174189903 + L1M4 LINE L1 4370 4435 -1749 1911 130 40 23 chr2 76497951 76498251 -174189603 + AluSx SINE Alu 1 305 -7 4359 188 48 12 chr2 76498251 76498898 -174188956 + L1M4 LINE L1 4435 5057 -1127 2038 123 0 0 chr2 76498898 76499175 -174188679 + AluSx SINE Alu 1 277 -35 209 33 33 0 chr2 76499176 76499206 -174188648 + (TAAAA)n Simple_repeat Simple_repeat 1 31 0 4359 188 48 12 chr2 76499206 76499363 -174188491 + L1M4 LINE L1 5057 5207 -977 1730 177 9 22 chr2 76499363 76499679 -174188175 + AluJo SINE Alu 1 312 0 4359 188 48 12 chr2 76499679 76500068 -174187786 + L1M4 LINE L1 5207 5702 -482 1675 164 4 0 chr2 76500652 76500915 -174186939 - AluJb SINE Alu -48 264 1 1215 131 14 23 chr2 76501205 76501426 -174186428 - MLT1B LTR MaLR -2 388 170 1394 196 7 18 chr2 76501427 76501713 -174186141 - AluJo SINE Alu -2 310 28 1933 147 3 3 chr2 76502007 76502307 -174185547 - AluJo SINE Alu -12 300 1 353 262 15 25 chr2 76502592 76502684 -174185170 + MIR SINE MIR 2 102 -106 769 191 37 56 chr2 76502686 76502848 -174185006 + FRAM SINE Alu 11 169 -7 277 210 210 40 chr2 76502848 76502972 -174184882 + MIR SINE MIR 99 243 -19 2159 117 0 3 chr2 76505527 76505827 -174182027 + AluSx SINE Alu 1 299 -13 345 289 254 0 chr2 76506125 76506326 -174181528 - MIR SINE MIR -8 254 3 621 252 126 5 chr2 76506651 76506857 -174180997 - MIR SINE MIR -17 245 15 29 78 0 0 chr2 76509672 76509736 -174178118 + GC_rich Low_complexity Low_complexity 1 64 0 2322 113 0 0 chr2 76509868 76510169 -174177685 + AluSx SINE Alu 1 301 -11 579 170 40 0 chr2 76510181 76510281 -174177573 + FRAM SINE Alu 59 162 -14 630 101 11 0 chr2 76510281 76510370 -174177484 - MLT1B LTR MaLR -300 90 1 2253 78 3 39 chr2 76510384 76510691 -174177163 + AluY SINE Alu 1 296 -15 279 229 0 107 chr2 76510880 76511002 -174176852 + L1MC5 LINE L1 6811 6919 -1042 1372 188 31 44 chr2 76511017 76511401 -174176453 + L1MC5 LINE L1 7118 7496 -465 1780 162 60 41 chr2 76511467 76511886 -174175968 + L1MC3 LINE L1 6685 7111 -674 417 189 27 0 chr2 76511898 76511972 -174175882 + MLT1F1 LTR MaLR 49 124 -443 666 197 40 13 chr2 76511989 76512108 -174175746 + L1MD3 LINE L1 7419 7533 -462 1909 113 40 7 chr2 76512108 76512383 -174175471 + AluSx SINE Alu 2 285 -27 405 0 0 0 chr2 76512383 76512428 -174175426 + (CA)n Simple_repeat Simple_repeat 2 46 0 666 197 40 13 chr2 76512428 76512459 -174175395 + L1MD3 LINE L1 7532 7574 -421 3641 14 0 2 chr2 76512502 76512939 -174174915 - L1HS LINE L1 0 6155 5720 748 185 0 7 chr2 76512935 76513081 -174174773 + L1MD3 LINE L1 7580 7724 -271 * 571 184 69 42 chr2 76513177 76513255 -174174599 + MER69 DNA AcHobo 2170 2244 -282 1802 92 123 11 chr2 76513255 76513515 -174174339 + AluSg1 SINE Alu 4 292 -17 571 184 69 42 chr2 76513515 76513653 -174174201 + MER69 DNA AcHobo 2244 2392 -134 1451 122 17 68 chr2 76513654 76513950 -174173904 - L1MD3 LINE L1 -25 7970 7690 180 77 0 0 chr2 76514018 76514044 -174173810 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 707 324 40 44 chr2 76514044 76514362 -174173492 + L2 LINE L2 2735 3057 -215 2825 146 12 16 chr2 76514362 76514849 -174173005 + MER31A LTR ERV1 1 485 0 707 324 40 44 chr2 76514849 76515064 -174172790 + L2 LINE L2 3057 3271 -1 2094 133 16 7 chr2 76515232 76515541 -174172313 + AluSx SINE Alu 1 312 0 382 327 85 33 chr2 76515819 76516030 -174171824 - L1M4 LINE L1 -3371 2775 2554 472 159 49 147 chr2 76516085 76516248 -174171606 + FRAM SINE Alu 30 176 0 382 132 13 0 chr2 76516278 76516354 -174171500 - L1PA16 LINE L1 0 6166 6090 308 256 110 79 chr2 76516389 76516616 -174171238 + L1M4c LINE L1 2258 2491 -3893 698 184 0 0 chr2 76516621 76516735 -174171119 + FLAM_A SINE Alu 1 114 -19 2534 61 3 0 chr2 76516772 76517067 -174170787 + AluY SINE Alu 1 296 -15 208 182 23 0 chr2 76517172 76517216 -174170638 - L2 LINE L2 -12 3301 3257 320 374 8 16 chr2 76517219 76517342 -174170512 + L1M4 LINE L1 4749 4870 -1276 463 185 9 9 chr2 76517467 76517575 -174170279 + GA-rich Low_complexity Low_complexity 4 111 0 349 378 28 0 chr2 76518098 76518241 -174169613 - MIR SINE MIR -54 208 62 831 183 17 17 chr2 76518927 76519102 -174168752 + MER45A DNA AcHobo 4 178 0 234 0 0 0 chr2 76519512 76519538 -174168316 + (TG)n Simple_repeat Simple_repeat 1 26 0 848 133 8 0 chr2 76520283 76520411 -174167443 - FLAM_C SINE Alu -4 129 1 278 283 110 46 chr2 76520660 76520833 -174167021 - MIR3 SINE MIR -20 188 5 462 238 79 0 chr2 76521163 76521289 -174166565 + MER91A DNA MER1_type 1 136 -60 387 267 23 11 chr2 76521894 76522070 -174165784 + (CA)n Simple_repeat Simple_repeat 2 179 0 2249 102 10 0 chr2 76522191 76522484 -174165370 - AluSx SINE Alu -16 296 1 1088 103 0 0 chr2 76522484 76522620 -174165234 - AluSq/x SINE Alu -176 136 1 191 333 0 0 chr2 76522861 76522918 -174164936 - L2 LINE L2 -80 3192 3136 402 202 115 19 chr2 76523399 76523503 -174164351 - MER96 DNA MER1_type? -51 124 11 26 0 0 0 chr2 76524708 76524734 -174163120 + GC_rich Low_complexity Low_complexity 1 26 0 234 186 14 57 chr2 76527093 76527163 -174160691 + MIR SINE MIR 66 132 -130 1528 140 9 106 chr2 76527183 76527512 -174160342 + AluJb SINE Alu 4 300 -12 500 251 88 5 chr2 76527693 76527911 -174159943 + L1ME2 LINE L1 5692 5934 -230 34 0 0 0 chr2 76527914 76527948 -174159906 + AT_rich Low_complexity Low_complexity 1 34 0 859 123 0 0 chr2 76527950 76528072 -174159782 - FLAM_C SINE Alu -11 122 1 21 0 0 0 chr2 76528249 76528270 -174159584 + AT_rich Low_complexity Low_complexity 1 21 0 417 278 83 33 chr2 76528448 76528689 -174159165 + L2 LINE L2 2142 2394 -920 1962 77 66 66 chr2 76529202 76529489 -174158365 + AluSg SINE Alu 5 291 -19 7281 36 0 1 chr2 76529631 76531141 -174156713 + L1PA5 LINE L1 4639 6150 -4 1863 173 3 19 chr2 76531186 76531499 -174156355 + AluSx SINE Alu 1 308 -4 927 162 0 45 chr2 76531499 76531653 -174156201 + AluSg/x SINE Alu 132 278 -32 1024 66 36 6 chr2 76531654 76531820 -174156034 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 2286 119 3 0 chr2 76531833 76532145 -174155709 + AluSq SINE Alu 1 313 0 422 38 25 51 chr2 76532147 76532226 -174155628 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 922 281 114 40 chr2 76532583 76532680 -174155174 - L2 LINE L2 -2 3311 3223 608 200 17 0 chr2 76532680 76532795 -174155059 + FLAM_A SINE Alu 1 117 -16 198 0 0 0 chr2 76532799 76532821 -174155033 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 922 281 114 40 chr2 76532821 76532972 -174154882 - L2 LINE L2 -92 3221 3083 1846 86 0 128 chr2 76532972 76533339 -174154515 - AluSq SINE Alu 0 324 1 922 281 114 40 chr2 76533339 76533809 -174154045 - L2 LINE L2 -230 3083 2534 1110 182 243 12 chr2 76533809 76534056 -174153798 - AluSg1 SINE Alu -5 304 1 744 219 22 6 chr2 76534056 76534239 -174153615 - L2 LINE L2 -771 2543 2358 2371 102 0 19 chr2 76534448 76534761 -174153093 - AluSx SINE Alu -5 307 1 1375 238 142 42 chr2 76534957 76535122 -174152732 - MLT1G1 LTR MaLR 0 595 448 981 207 0 0 chr2 76535122 76535296 -174152558 + MER45A DNA AcHobo 1 174 -4 1375 238 142 42 chr2 76535296 76535671 -174152183 - MLT1G1 LTR MaLR -147 448 1 1006 183 0 0 chr2 76535750 76535925 -174151929 - FAM SINE Alu 0 175 1 334 233 33 0 chr2 76536247 76536337 -174151517 + MER5A DNA MER1_type 17 109 -80 586 207 52 0 chr2 76536405 76536540 -174151314 + MER5B DNA MER1_type 1 142 -36 279 54 0 0 chr2 76537273 76537310 -174150544 + (CCA)n Simple_repeat Simple_repeat 2 38 0 1947 159 30 0 chr2 76537608 76537909 -174149945 + AluSx SINE Alu 3 312 0 462 85 0 149 chr2 76538105 76538134 -174149720 + MADE1 DNA Mariner 1 33 -47 2063 125 21 0 chr2 76538134 76538421 -174149433 + AluSx SINE Alu 1 293 -19 462 85 0 149 chr2 76538421 76538485 -174149369 + MADE1 DNA Mariner 33 80 0 266 280 140 0 chr2 76538485 76538578 -174149276 + MIR SINE MIR 49 154 -108 180 209 15 90 chr2 76538856 76538923 -174148931 + MIR SINE MIR 91 152 -56 664 199 8 0 chr2 76538935 76539066 -174148788 + FLAM_C SINE Alu 8 139 -4 2240 136 3 0 chr2 76539083 76539392 -174148462 + AluSx SINE Alu 1 310 -2 2184 110 13 3 chr2 76539392 76539692 -174148162 + AluSc SINE Alu 1 303 -6 647 98 0 10 chr2 76539699 76539801 -174148053 + (GGAA)n Simple_repeat Simple_repeat 4 104 0 2235 99 7 0 chr2 76540129 76540450 -174147404 - AluSx SINE Alu 0 323 1 228 235 113 78 chr2 76540561 76540676 -174147178 + L2 LINE L2 3144 3262 -10 253 248 0 29 chr2 76541079 76541184 -174146670 + GA-rich Low_complexity Low_complexity 1 102 0 191 241 13 51 chr2 76541580 76541659 -174146195 - L2 LINE L2 0 3313 3238 479 274 62 35 chr2 76541672 76542005 -174145849 + L1MC4a LINE L1 5545 5824 -297 351 260 122 57 chr2 76542094 76542210 -174145644 - L1ME LINE L1 -377 5744 5637 826 152 0 0 chr2 76542210 76542342 -174145512 + AluJo/FLAM SINE Alu 1 132 -170 1661 152 4 4 chr2 76542342 76542622 -174145232 + AluJb SINE Alu 27 306 0 217 0 0 0 chr2 76542598 76542713 -174145141 + (CAA)n Simple_repeat Simple_repeat 1 115 0 351 260 122 57 chr2 76542622 76543022 -174144832 - L1ME LINE L1 -484 5637 5282 2117 133 10 0 chr2 76543022 76543315 -174144539 - AluSq SINE Alu -17 296 1 351 260 122 57 chr2 76543315 76543344 -174144510 - L1ME LINE L1 -839 5282 5256 651 174 30 8 chr2 76543445 76543569 -174144285 + AluJo SINE Alu 1 130 -182 2242 138 0 0 chr2 76543569 76543881 -174143973 - AluSx SINE Alu 0 312 1 2261 91 0 0 chr2 76544198 76544472 -174143382 - AluSg SINE Alu -12 298 25 1748 260 123 20 chr2 76544502 76545049 -174142805 + MLT2F LTR ERVL 10 612 -51 684 172 8 8 chr2 76545095 76545217 -174142637 + FLAM_A SINE Alu 5 126 -7 257 224 0 0 chr2 76545217 76545275 -174142579 + MLT2F LTR ERVL 604 661 -2 23 33 0 0 chr2 76545450 76545480 -174142374 + AT_rich Low_complexity Low_complexity 1 30 0 2216 114 10 7 chr2 76545480 76545787 -174142067 - AluSq SINE Alu -5 308 1 448 284 54 30 chr2 76545877 76546201 -174141653 + ERVL-F LTR ERVL 298 714 -5050 1093 132 61 168 chr2 76546208 76546535 -174141319 + AluJo SINE Alu 2 293 -9 1175 299 102 19 chr2 76546588 76547127 -174140727 + ERVL-F LTR ERVL 861 1444 -4320 3512 226 79 14 chr2 76547453 76548415 -174139439 + ERVL LTR ERVL 4138 5223 -541 535 224 51 39 chr2 76548431 76548492 -174139362 - L1ME3A LINE L1 -68 6102 6043 2179 123 7 13 chr2 76548492 76548800 -174139054 + AluSq SINE Alu 1 306 -7 535 224 51 39 chr2 76548800 76548894 -174138960 - L1ME3A LINE L1 -127 6043 5945 463 95 0 14 chr2 76548897 76548971 -174138883 - Alu SINE Alu -4 308 236 1271 235 29 64 chr2 76548972 76549263 -174138591 - L1ME3A LINE L1 -403 5767 5467 2175 85 38 57 chr2 76549263 76549581 -174138273 - AluSq SINE Alu -1 312 1 1271 235 29 64 chr2 76549581 76549683 -174138171 - L1ME3A LINE L1 -703 5467 5389 2417 85 3 0 chr2 76549683 76549977 -174137877 - AluSx SINE Alu -17 295 1 1271 235 29 64 chr2 76549977 76550033 -174137821 - L1ME3A LINE L1 -781 5389 5333 2338 77 14 3 chr2 76550072 76550382 -174137472 + AluSq SINE Alu 1 313 0 1049 117 123 0 chr2 76550419 76550573 -174137281 + AluSg/x SINE Alu 125 297 -13 584 221 34 37 chr2 76550575 76550836 -174137018 + L1ME LINE L1 5182 5436 -728 237 33 0 0 chr2 76551049 76551079 -174136775 + (CAAAT)n Simple_repeat Simple_repeat 2 31 0 458 105 0 40 chr2 76551079 76551155 -174136699 - AluJ/FLAM SINE Alu -238 74 2 21 36 0 0 chr2 76551259 76551287 -174136567 + AT_rich Low_complexity Low_complexity 1 28 0 2270 113 0 13 chr2 76552833 76552969 -174134885 + AluSx SINE Alu 1 137 -175 2759 32 3 0 chr2 76552969 76553279 -174134575 + AluY SINE Alu 1 311 0 2270 113 0 13 chr2 76553279 76553452 -174134402 + AluSx SINE Alu 137 306 -6 978 136 7 0 chr2 76553841 76554021 -174133833 - AluSg/x SINE Alu 0 314 134 2028 72 4 0 chr2 76554021 76554271 -174133583 - AluY SINE Alu -1 310 60 300 276 74 69 chr2 76554271 76554380 -174133474 - L1ME3A LINE L1 -781 5365 5258 1714 164 49 0 chr2 76554380 76554666 -174133188 + AluSx SINE Alu 1 300 -12 300 276 74 69 chr2 76554666 76554773 -174133081 - L1ME3A LINE L1 -888 5258 5148 1068 162 56 35 chr2 76554795 76554993 -174132861 - AluJb SINE Alu -13 299 98 1281 134 16 31 chr2 76554993 76555187 -174132667 - AluJb SINE Alu -121 191 1 358 315 43 25 chr2 76555192 76555354 -174132500 - L1ME3A LINE L1 -1038 5108 4944 525 198 59 113 chr2 76555412 76555484 -174132370 - MIR SINE MIR -1 261 187 1552 184 38 4 chr2 76555484 76555784 -174132070 - AluJb SINE Alu 0 314 6 525 198 59 113 chr2 76555784 76555932 -174131922 - MIR SINE MIR -75 187 52 2431 111 0 0 chr2 76555938 76556245 -174131609 - AluSx SINE Alu -5 307 1 280 316 42 0 chr2 76556515 76556610 -174131244 + L2 LINE L2 2925 3023 -290 365 165 0 147 chr2 76556651 76556708 -174131146 + L2 LINE L2 2183 2218 -1096 2166 125 0 3 chr2 76556708 76557003 -174130851 - AluSx SINE Alu -16 296 3 365 165 0 147 chr2 76557003 76557054 -174130800 + L2 LINE L2 2218 2275 -1039 316 200 209 48 chr2 76557072 76557177 -174130677 + L2 LINE L2 3191 3312 -1 2060 123 40 7 chr2 76558055 76558355 -174129499 + AluSg SINE Alu 1 310 0 1815 279 160 25 chr2 76558390 76559764 -174128090 + L2 LINE L2 1708 3269 -3 195 243 108 0 chr2 76560265 76560339 -174127515 + MIR SINE MIR 63 144 -118 648 170 162 23 chr2 76560462 76560646 -174127208 - MER21A LTR ERV1 0 906 711 1910 94 105 0 chr2 76560649 76560915 -174126939 - AluSg SINE Alu -16 294 1 725 214 30 0 chr2 76560945 76561076 -174126778 - MER21B LTR ERV1 -728 135 1 1600 148 8 4 chr2 76561314 76561558 -174126296 - AluJo SINE Alu -31 281 37 309 161 0 18 chr2 76562107 76562163 -174125691 - AluJ SINE Alu -58 244 190 442 155 0 0 chr2 76562163 76562234 -174125620 - AluJ SINE Alu -146 156 86 517 103 58 0 chr2 76562236 76562323 -174125531 + AluJb SINE Alu 199 290 -22 2201 77 33 13 chr2 76562846 76563145 -174124709 + AluSx SINE Alu 1 305 -7 348 165 103 72 chr2 76564048 76564145 -174123709 - L1ME4a LINE L1 -29 6092 5993 229 167 0 19 chr2 76564425 76564479 -174123375 - L1ME4a LINE L1 -690 5431 5379 305 347 110 27 chr2 76565258 76565477 -174122377 - L1 LINE L1 -2439 3707 3471 1031 119 0 0 chr2 76565670 76565804 -174122050 + AluSq/x SINE Alu 3 136 -176 2135 112 7 20 chr2 76565804 76566107 -174121747 + AluSx SINE Alu 1 299 -13 839 135 16 0 chr2 76566138 76566264 -174121590 - FLAM_C SINE Alu -5 128 1 2325 116 0 0 chr2 76566351 76566645 -174121209 - AluSg SINE Alu -16 294 1 671 200 168 0 chr2 76567357 76567512 -174120342 - MER5A DNA MER1_type 0 189 9 318 323 93 0 chr2 76567541 76567703 -174120151 - MIR SINE MIR -27 181 32 265 279 27 54 chr2 76567709 76567820 -174120034 - L2 LINE L2 -23 3249 3142 2146 121 0 0 chr2 76568790 76569071 -174118783 - AluSq SINE Alu -32 281 1 180 200 0 0 chr2 76569270 76569315 -174118539 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 203 244 24 0 chr2 76569328 76569369 -174118485 + MIR SINE MIR 201 242 -20 * 209 268 36 0 chr2 76569337 76569393 -174118461 + L2 LINE L2 3215 3272 0 225 94 0 0 chr2 76575256 76575288 -174112566 + (GGA)n Simple_repeat Simple_repeat 2 33 0 1904 158 0 20 chr2 76576834 76577131 -174110723 - AluJo SINE Alu -21 291 1 200 287 73 67 chr2 76577226 76577390 -174110464 + MIR3 SINE MIR 41 205 -3 1440 141 23 0 chr2 76578503 76578723 -174109131 - AluJb SINE Alu -3 309 85 283 292 112 62 chr2 76579069 76579286 -174108568 - MIR SINE MIR -17 245 21 573 264 179 53 chr2 76579973 76580415 -174107439 + L2 LINE L2 2566 3048 -224 2584 47 0 0 chr2 76580507 76580808 -174107046 - AluY SINE Alu -10 301 1 1555 122 12 125 chr2 76580808 76581144 -174106710 - AluJb SINE Alu -4 298 1 214 348 22 0 chr2 76581177 76581269 -174106585 + L2 LINE L2 3219 3312 -1 2679 32 0 7 chr2 76581443 76581753 -174106101 + AluY SINE Alu 1 308 -3 237 382 14 0 chr2 76582003 76582147 -174105707 + (TG)n Simple_repeat Simple_repeat 1 146 0 378 318 20 30 chr2 76582651 76582852 -174105002 + L1ME LINE L1 5527 5725 -396 1650 179 3 58 chr2 76582853 76583272 -174104582 + AluJo SINE Alu 2 402 0 2289 99 3 7 chr2 76583279 76583583 -174104271 + AluSp SINE Alu 7 309 -4 242 164 18 0 chr2 76583584 76583639 -174104215 + GA-rich Low_complexity Low_complexity 1 56 0 196 329 30 30 chr2 76583641 76583808 -174104046 - L2 LINE L2 -410 2904 2738 295 259 32 70 chr2 76584943 76585101 -174102753 - Charlie8 DNA MER1_type -2185 232 81 354 185 15 0 chr2 76585146 76585211 -174102643 - MLT1D LTR MaLR -2 503 438 2133 110 21 0 chr2 76585211 76585492 -174102362 + AluSx SINE Alu 1 287 -25 808 152 5 27 chr2 76585492 76585676 -174102178 + GA-rich Low_complexity Low_complexity 1 180 0 299 0 42 42 chr2 76585676 76585724 -174102130 + (GAAA)n Simple_repeat Simple_repeat 4 51 0 1548 174 95 31 chr2 76585731 76586088 -174101766 - MLT1D LTR MaLR -125 380 1 905 227 36 110 chr2 76586342 76586603 -174101251 - L1MB7 LINE L1 -10 6174 5950 2348 112 0 0 chr2 76586603 76586915 -174100939 + AluSx SINE Alu 1 312 0 905 227 36 110 chr2 76586915 76587045 -174100809 - L1MB7 LINE L1 -234 5950 5812 788 179 0 0 chr2 76587061 76587184 -174100670 - FLAM_C SINE Alu -19 124 2 2536 44 7 0 chr2 76587211 76587506 -174100348 + AluY SINE Alu 1 297 -14 1394 67 0 0 chr2 76587506 76587671 -174100183 + AluSc SINE Alu 132 296 -13 1300 137 75 109 chr2 76587675 76587954 -174099900 - L1MB7 LINE L1 -347 5819 5553 2184 132 10 6 chr2 76587954 76588265 -174099589 - AluSx SINE Alu 0 312 1 1300 137 75 109 chr2 76588265 76588343 -174099511 - L1MB7 LINE L1 -613 5553 5474 * 1464 163 62 0 chr2 76588337 76588625 -174099229 - L1MB7 LINE L1 -1252 4894 4589 2699 226 40 57 chr2 76588657 76589468 -174098386 - MER21B LTR ERV1 -55 808 12 228 164 0 131 chr2 76589481 76589542 -174098312 - L1MB7 LINE L1 -1552 4594 4542 585 124 152 0 chr2 76589546 76589651 -174098203 - FLAM_C SINE Alu -3 140 20 4602 231 57 16 chr2 76589671 76590688 -174097166 - L1MB7 LINE L1 -1909 4237 3149 2408 85 3 25 chr2 76590688 76591005 -174096849 - AluSp SINE Alu -1 312 3 4602 231 57 16 chr2 76591005 76591337 -174096517 - L1MB7 LINE L1 -2997 3149 2832 375 239 56 56 chr2 76591542 76591684 -174096170 - L1MC5 LINE L1 -14 7947 7806 1990 149 0 0 chr2 76591809 76592118 -174095736 - AluJb SINE Alu 0 315 7 832 268 59 97 chr2 76592124 76592757 -174095097 - L1MDa LINE L1 -861 2040 1207 2145 125 0 0 chr2 76592757 76593071 -174094783 - AluSx SINE Alu 0 314 1 832 268 59 97 chr2 76593071 76593183 -174094671 - L1MDa LINE L1 -1694 1207 1092 282 307 150 7 chr2 76593870 76594023 -174093831 - L2 LINE L2 -981 2333 2159 2117 96 3 38 chr2 76594846 76595162 -174092692 - AluSx SINE Alu 0 306 1 283 268 0 0 chr2 76595203 76595259 -174092595 - L2 LINE L2 -7 3306 3251 235 237 71 128 chr2 76595717 76595928 -174091926 + L2 LINE L2 1803 2001 -1313 379 251 48 66 chr2 76596076 76596228 -174091626 - L1ME4a LINE L1 -104 6017 5864 2285 171 67 10 chr2 76596228 76596631 -174091223 + MSTB LTR MaLR 1 426 0 379 251 48 66 chr2 76596631 76596796 -174091058 - L1ME4a LINE L1 -257 5864 5700 567 108 0 0 chr2 76596832 76596906 -174090948 + AluJ/FLAM SINE Alu 28 101 -211 330 325 88 21 chr2 76597255 76597449 -174090405 + L1MEd LINE L1 721 927 -5192 1158 173 0 0 chr2 76597501 76597680 -174090174 + AluJb SINE Alu 130 308 -4 441 291 96 20 chr2 76597776 76598082 -174089772 + L1MC4 LINE L1 7311 7736 -306 278 327 2 0 chr2 76598176 76598296 -174089558 + L1MC5 LINE L1 7808 8011 -31 180 294 82 12 chr2 76598326 76598411 -174089443 - L3b LINE CR1 -118 1465 1375 258 133 0 0 chr2 76598689 76598734 -174089120 - L1ME4a LINE L1 -1 6120 6076 229 171 40 40 chr2 76598808 76598884 -174088970 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2209 116 0 0 chr2 76599082 76599375 -174088479 - AluSx SINE Alu -19 293 1 2253 66 3 90 chr2 76599503 76599838 -174088016 - AluSx SINE Alu -6 306 1 1678 139 12 106 chr2 76599841 76600041 -174087813 - AluJb SINE Alu -13 299 141 1627 91 9 17 chr2 76600041 76600271 -174087583 + AluY SINE Alu 80 307 -4 1678 139 12 106 chr2 76600271 76600400 -174087454 - AluJb SINE Alu -171 141 1 24 0 0 0 chr2 76600400 76600424 -174087430 + AT_rich Low_complexity Low_complexity 1 24 0 1604 144 104 7 chr2 76600741 76601019 -174086835 - AluJb SINE Alu -7 305 1 339 291 110 0 chr2 76601063 76601190 -174086664 - L1ME4a LINE L1 -2001 5807 5667 447 254 87 54 chr2 76601197 76601473 -174086381 + L1MEd LINE L1 973 1257 -4862 2535 54 3 0 chr2 76601574 76601871 -174085983 + AluY SINE Alu 1 298 -13 2290 125 0 0 chr2 76601895 76602198 -174085656 + AluSx SINE Alu 1 303 -9 1130 214 159 107 chr2 76602216 76602476 -174085378 + L1MC5 LINE L1 6562 6807 -1154 2067 117 0 31 chr2 76602476 76602766 -174085088 + AluSx SINE Alu 5 285 -27 1130 214 159 107 chr2 76602766 76603765 -174084089 + L1MC5 LINE L1 6807 7913 -48 2527 76 3 0 chr2 76603816 76604120 -174083734 + AluY SINE Alu 1 305 -6 1247 147 0 0 chr2 76604198 76604368 -174083486 + AluSx SINE Alu 1 170 -142 411 139 0 58 chr2 76604368 76604454 -174083400 + Alu SINE Alu 229 309 -1 473 289 66 5 chr2 76604472 76604669 -174083185 + L1M1 LINE L1 2809 3093 -4548 251 299 60 30 chr2 76604811 76604978 -174082876 - L1M4 LINE L1 -1785 4361 4190 2343 93 3 7 chr2 76605051 76605353 -174082501 - AluSx SINE Alu -11 301 1 435 292 67 5 chr2 76605364 76605559 -174082295 - L1M4 LINE L1 -1987 4159 3953 2389 98 0 0 chr2 76605990 76606295 -174081559 - AluSx SINE Alu -7 305 1 248 304 192 37 chr2 76606329 76606865 -174080989 + L2 LINE L2 2027 2645 -669 204 40 0 0 chr2 76607506 76607531 -174080323 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2277 61 0 4 chr2 76607533 76607813 -174080041 - AluY SINE Alu -32 279 1 235 284 236 36 chr2 76608033 76608673 -174079181 - L2 LINE L2 -821 2493 1726 567 142 80 0 chr2 76609125 76609238 -174078616 - MLT1F1 LTR MaLR -445 122 1 811 85 28 0 chr2 76609241 76609340 -174078514 + AluSg/x SINE Alu 183 287 -25 378 42 0 0 chr2 76609340 76609388 -174078466 + (CAAAC)n Simple_repeat Simple_repeat 2 49 0 1725 155 0 0 chr2 76609552 76609804 -174078050 + AluJb SINE Alu 38 289 -23 2172 109 10 13 chr2 76609909 76610213 -174077641 + AluSx SINE Alu 1 303 -9 205 302 121 67 chr2 76610387 76610536 -174077318 - L2 LINE L2 -201 3071 2915 3190 113 93 8 chr2 76610704 76611190 -174076664 - MER1A DNA MER1_type 0 527 1 247 246 164 9 chr2 76611367 76611477 -174076377 + MIR SINE MIR 126 252 -10 2216 117 7 7 chr2 76611916 76612224 -174075630 + AluSx SINE Alu 1 308 -4 265 186 0 6 chr2 76612234 76612291 -174075563 - Alu SINE Alu -262 40 1 1715 235 32 11 chr2 76612291 76612754 -174075100 + L1ME1 LINE L1 5675 6147 -19 693 202 40 35 chr2 76613727 76613900 -174073954 - MIR SINE MIR -54 208 35 241 247 26 13 chr2 76614280 76614357 -174073497 - MER112 DNA MER1_type -6 254 177 2227 126 3 0 chr2 76614357 76614658 -174073196 + AluSx SINE Alu 1 302 -10 2028 127 3 23 chr2 76614671 76614978 -174072876 - AluSq SINE Alu -12 301 1 492 260 28 45 chr2 76614979 76615156 -174072698 - MER112 DNA MER1_type -69 191 18 2269 95 7 3 chr2 76615308 76615603 -174072251 - AluSx SINE Alu -16 296 1 306 277 112 41 chr2 76615723 76615965 -174071889 - L1ME4a LINE L1 -106 6015 5757 673 296 48 72 chr2 76616723 76617239 -174070615 - LTR33A LTR ERVL -19 504 1 1247 168 75 65 chr2 76617446 76617738 -174070116 - AluJo SINE Alu -17 295 1 2401 98 0 0 chr2 76617740 76618037 -174069817 - AluSc SINE Alu -12 297 1 880 134 0 49 chr2 76618037 76618179 -174069675 - AluJo SINE Alu -171 141 7 1454 142 19 0 chr2 76618429 76618634 -174069220 + AluJb SINE Alu 103 311 -1 525 161 25 37 chr2 76618638 76618799 -174069055 + GA-rich Low_complexity Low_complexity 3 161 0 1478 108 15 0 chr2 76618909 76619113 -174068741 + AluSq SINE Alu 95 301 -12 247 289 0 12 chr2 76619183 76619266 -174068588 + L1P LINE L1 3187 3268 -2878 287 48 0 24 chr2 76619266 76619308 -174068546 + (GA)n Simple_repeat Simple_repeat 1 41 0 318 319 25 7 chr2 76619309 76619525 -174068329 + L1M4 LINE L1 3263 3486 -2660 826 256 128 39 chr2 76620621 76621058 -174066796 + MLT1K LTR MaLR 1 476 0 211 264 0 19 chr2 76621068 76621121 -174066733 + L2 LINE L2 2224 2275 -1039 375 342 34 103 chr2 76621132 76621512 -174066342 - L2 LINE L2 -4 3268 2915 533 222 14 62 chr2 76621512 76621656 -174066198 + L2 LINE L2 3177 3313 0 215 299 100 100 chr2 76622654 76623116 -174064738 + L2 LINE L2 2308 2769 -545 219 226 36 48 chr2 76623281 76623365 -174064489 + L2 LINE L2 2977 3059 -213 352 263 61 0 chr2 76623957 76624056 -174063798 - MIR SINE MIR -69 193 89 315 245 11 26 chr2 76624081 76624187 -174063667 + MLT1F LTR MaLR 20 103 -439 326 294 46 20 chr2 76624385 76624538 -174063316 + MLT1H LTR MaLR 392 548 -1 188 146 21 83 chr2 76624661 76624685 -174063169 + L2 LINE L2 3269 3290 -23 2325 105 3 0 chr2 76624685 76624979 -174062875 - AluSp SINE Alu -18 295 1 188 146 21 83 chr2 76624979 76625002 -174062852 + L2 LINE L2 3290 3313 0 1749 167 33 13 chr2 76625116 76625421 -174062433 + AluJb SINE Alu 1 311 -1 204 325 0 0 chr2 76626352 76626429 -174061425 + (CA)n Simple_repeat Simple_repeat 2 78 0 223 205 36 36 chr2 76627034 76627117 -174060737 + GA-rich Low_complexity Low_complexity 1 83 0 274 43 0 43 chr2 76627582 76627628 -174060226 + (GGA)n Simple_repeat Simple_repeat 1 44 0 302 309 287 0 chr2 76629025 76629206 -174058648 - MIR SINE MIR -28 234 2 517 352 0 0 chr2 76629425 76629604 -174058250 + (TG)n Simple_repeat Simple_repeat 1 179 0 231 317 25 17 chr2 76629886 76630006 -174057848 + CT-rich Low_complexity Low_complexity 3 123 0 337 323 25 6 chr2 76630689 76630847 -174057007 + MIR3 SINE MIR 7 167 -41 818 161 0 0 chr2 76630868 76630986 -174056868 - FLAM_C SINE Alu -25 118 1 626 284 41 0 chr2 76631162 76631356 -174056498 + L1MEd LINE L1 3 204 -5915 723 304 65 29 chr2 76631400 76631709 -174056145 + L1MEd LINE L1 425 744 -5375 239 380 31 0 chr2 76631951 76632114 -174055740 - L2 LINE L2 -1075 2239 2072 222 186 0 0 chr2 76633925 76633968 -174053886 - L2 LINE L2 -1 3271 3229 434 256 102 11 chr2 76637176 76637352 -174050502 + MIR SINE MIR 21 212 -50 211 247 27 41 chr2 76638303 76638376 -174049478 - L2 LINE L2 -2 3311 3240 579 206 18 29 chr2 76638956 76639132 -174048722 + MIR SINE MIR 2 262 0 2403 104 3 0 chr2 76639696 76640003 -174047851 - AluSg SINE Alu -2 308 1 21 0 0 0 chr2 76641077 76641098 -174046756 + AT_rich Low_complexity Low_complexity 1 21 0 1025 191 183 12 chr2 76641145 76641386 -174046468 + AluJo SINE Alu 1 282 -30 29 28 0 0 chr2 76641390 76641426 -174046428 + AT_rich Low_complexity Low_complexity 1 36 0 478 134 0 12 chr2 76641461 76641543 -174046311 - FLAM_C SINE Alu -7 136 56 488 311 50 22 chr2 76641570 76641750 -174046104 + L2 LINE L2 2705 2889 -425 327 232 125 0 chr2 76641923 76642035 -174045819 + MER112 DNA MER1_type 4 129 -131 29 28 0 0 chr2 76643975 76644011 -174043843 + AT_rich Low_complexity Low_complexity 1 36 0 601 211 8 15 chr2 76644265 76644398 -174043456 - FLAM_A SINE Alu -1 132 1 21 0 0 0 chr2 76644398 76644419 -174043435 + AT_rich Low_complexity Low_complexity 1 21 0 671 213 8 0 chr2 76644834 76644961 -174042893 + FLAM_C SINE Alu 1 128 -5 2498 80 0 0 chr2 76645103 76645405 -174042449 - AluSq SINE Alu -11 302 1 886 161 0 0 chr2 76645504 76645634 -174042220 + FLAM_C SINE Alu 1 130 -13 2375 86 3 0 chr2 76645651 76645943 -174041911 - AluSx SINE Alu -19 293 1 186 338 29 0 chr2 76646627 76646695 -174041159 + MIR SINE MIR 57 126 -136 229 243 22 83 chr2 76646804 76646934 -174040920 + MIR SINE MIR 44 171 -37 23 86 0 0 chr2 76646944 76647002 -174040852 + AT_rich Low_complexity Low_complexity 1 58 0 764 135 15 15 chr2 76647430 76647563 -174040291 - FLAM_C SINE Alu 0 133 1 340 283 104 28 chr2 76648533 76648727 -174039127 - L1MC4a LINE L1 -1772 6036 5823 894 186 88 10 chr2 76648727 76648920 -174038934 + MER3 DNA MER1_type 1 208 -1 340 283 104 28 chr2 76648920 76648937 -174038917 - L1MC4a LINE L1 -1985 5823 5809 240 329 14 0 chr2 76649665 76649738 -174038116 + L2 LINE L2 2394 2467 -847 230 358 37 0 chr2 76650120 76650201 -174037653 + L2 LINE L2 2961 3044 -228 2329 106 0 13 chr2 76651715 76652018 -174035836 - AluSx SINE Alu -13 299 1 1899 131 4 14 chr2 76654018 76654293 -174033561 + AluJo SINE Alu 1 272 -40 2260 99 3 3 chr2 76655022 76655315 -174032539 + AluSg SINE Alu 1 293 -17 270 192 0 37 chr2 76655433 76655507 -174032347 + MIR SINE MIR 83 152 -56 255 188 34 11 chr2 76655533 76655617 -174032237 + MIR SINE MIR 66 148 -66 243 0 0 0 chr2 76655688 76655715 -174032139 + (TA)n Simple_repeat Simple_repeat 1 27 0 215 335 103 7 chr2 76657091 76657246 -174030608 + MIR SINE MIR 21 190 -72 1624 174 35 14 chr2 76657640 76657927 -174029927 - AluJb SINE Alu -16 296 4 614 225 110 12 chr2 76663447 76663620 -174024234 - MIR SINE MIR -57 205 16 2247 112 3 7 chr2 76664421 76664717 -174023137 - AluSx SINE Alu -17 295 1 328 316 34 8 chr2 76664828 76664945 -174022909 - L2 LINE L2 0 3272 3153 2447 103 0 0 chr2 76665300 76665610 -174022244 + AluSx SINE Alu 1 310 -2 310 311 116 49 chr2 76665898 76666089 -174021765 - MIR SINE MIR -5 257 46 2270 85 4 0 chr2 76666089 76666404 -174021450 - AluSp SINE Alu 0 316 1 310 311 116 49 chr2 76666404 76666436 -174021418 - MIR SINE MIR -216 46 18 700 135 7 64 chr2 76666702 76666843 -174021011 + FLAM_C SINE Alu 11 143 0 250 302 0 28 chr2 76669338 76669444 -174018410 + GA-rich Low_complexity Low_complexity 2 104 0 1048 243 220 10 chr2 76670852 76670984 -174016870 - L2 LINE L2 -3 3310 3207 1861 154 30 43 chr2 76670984 76671355 -174016499 - MER47A DNA MER2_type 0 366 1 1048 243 220 10 chr2 76671355 76671842 -174016012 - L2 LINE L2 -106 3207 1537 213 39 0 0 chr2 76672799 76672825 -174015029 + (CGG)n Simple_repeat Simple_repeat 2 27 0 29 60 0 0 chr2 76672978 76673028 -174014826 + GC_rich Low_complexity Low_complexity 1 50 0 1455 227 63 8 chr2 76673344 76673741 -174014113 + L1ME3 LINE L1 5709 6127 -35 430 217 26 26 chr2 76674560 76674675 -174013179 + MLT1K LTR MaLR 2 116 -472 809 286 80 21 chr2 76674721 76674985 -174012869 + MLT1K LTR MaLR 226 516 -72 2095 141 7 0 chr2 76674985 76675276 -174012578 - AluSx SINE Alu -19 293 1 809 286 80 21 chr2 76675276 76675350 -174012504 + MLT1K LTR MaLR 516 584 -4 405 317 121 12 chr2 76676726 76676966 -174010888 + MLT1K LTR MaLR 2 267 -321 253 333 67 0 chr2 76677035 76677185 -174010669 + MLT1K LTR MaLR 429 588 0 245 302 139 16 chr2 76677550 76677928 -174009926 - L1MC/D LINE L1 -743 5403 5042 737 203 0 0 chr2 76678081 76678214 -174009640 - FLAM_C SINE Alu 0 133 1 2532 64 0 29 chr2 76678224 76678537 -174009317 - AluY SINE Alu -7 304 1 2265 102 3 10 chr2 76678538 76678831 -174009023 - AluSq SINE Alu -22 291 1 694 193 5 92 chr2 76678906 76679124 -174008730 - L1MC5 LINE L1 -44 7917 7719 2171 112 10 0 chr2 76679139 76679433 -174008421 - AluSx SINE Alu -15 297 1 183 171 0 0 chr2 76680015 76680050 -174007804 + MIR SINE MIR 49 83 -179 21 0 0 0 chr2 76680228 76680249 -174007605 + AT_rich Low_complexity Low_complexity 1 21 0 334 289 69 51 chr2 76680325 76680808 -174007046 - L1MD2 LINE L1 -345 6014 5515 188 267 0 0 chr2 76681476 76681521 -174006333 - L2 LINE L2 -1 3312 3268 529 303 34 6 chr2 76682678 76682853 -174005001 - MIR SINE MIR -49 213 34 294 29 0 0 chr2 76683088 76683123 -174004731 + (TG)n Simple_repeat Simple_repeat 1 35 0 236 267 12 58 chr2 76683238 76683324 -174004530 - L2 LINE L2 -4 3309 3228 240 195 12 24 chr2 76683661 76683743 -174004111 + CT-rich Low_complexity Low_complexity 1 81 0 600 229 123 0 chr2 76684569 76684748 -174003106 - MIR SINE MIR -13 249 49 466 111 0 0 chr2 76684788 76684851 -174003003 + U6 snRNA snRNA 2 64 -43 258 289 116 0 chr2 76684864 76684985 -174002869 - L1ME LINE L1 -463 5658 5524 303 279 81 18 chr2 76684987 76685098 -174002756 - L1ME LINE L1 -2344 5464 5347 1877 112 8 4 chr2 76685127 76685385 -174002469 - AluSp SINE Alu -13 300 42 813 153 16 0 chr2 76685576 76685700 -174002154 - FLAM_C SINE Alu -17 126 1 228 260 0 0 chr2 76686475 76686525 -174001329 - MLT1K LTR MaLR -16 572 523 608 65 65 0 chr2 76686526 76686634 -174001220 + GA-rich Low_complexity Low_complexity 1 115 0 377 285 80 13 chr2 76687572 76687723 -174000131 + MIR SINE MIR 35 195 -67 216 0 0 0 chr2 76687767 76687791 -174000063 + (A)n Simple_repeat Simple_repeat 1 24 0 462 292 18 47 chr2 76688087 76688258 -173999596 - L2 LINE L2 -191 3081 2916 275 331 74 72 chr2 76688522 76688885 -173998969 - L2 LINE L2 -529 2785 2419 1928 142 10 32 chr2 76688885 76689194 -173998660 - AluJb SINE Alu -10 302 1 275 331 74 72 chr2 76689194 76689235 -173998619 - L2 LINE L2 -895 2419 2380 1206 183 79 88 chr2 76689258 76689690 -173998164 - L1ME3 LINE L1 0 6162 5735 349 287 58 69 chr2 76689848 76690036 -173997818 + L1MC4a LINE L1 4374 4559 -1587 584 300 145 25 chr2 76690047 76690440 -173997414 - LTR16A LTR ERVL -10 440 1 307 297 130 54 chr2 76690446 76690924 -173996930 + L1MC4a LINE L1 4562 5075 -1071 306 290 89 0 chr2 76690974 76691143 -173996711 + L1MC4a LINE L1 5722 5905 -1903 232 258 89 40 chr2 76691905 76692001 -173995853 + LTR67 LTR ERVL 428 533 -24 1905 222 107 32 chr2 76692001 76692554 -173995300 - MLT1G1 LTR MaLR -1 594 1 232 258 89 40 chr2 76692554 76692581 -173995273 + LTR67 LTR ERVL 533 557 0 307 312 112 64 chr2 76692667 76692981 -173994873 + L1MEd LINE L1 758 1086 -5033 303 157 0 0 chr2 76693209 76693279 -173994575 + CT-rich Low_complexity Low_complexity 1 70 0 274 43 0 43 chr2 76694370 76694416 -173993438 + (GGA)n Simple_repeat Simple_repeat 1 44 0 258 244 12 65 chr2 76696221 76696389 -173991465 + C-rich Low_complexity Low_complexity 6 164 0 637 279 32 18 chr2 76697685 76697904 -173989950 - MIR SINE MIR -33 229 8 233 367 78 8 chr2 76698454 76698582 -173989272 + L2 LINE L2 3123 3259 -13 24 0 0 0 chr2 76698998 76699022 -173988832 + AT_rich Low_complexity Low_complexity 1 24 0 3672 149 28 33 chr2 76699144 76699687 -173988167 - L1MA9 LINE L1 0 6312 5773 261 0 0 0 chr2 76699687 76699716 -173988138 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 3672 149 28 33 chr2 76699716 76699937 -173987917 - L1MA9 LINE L1 -539 5773 5552 3275 168 9 0 chr2 76700239 76700818 -173987036 - L1MA9 LINE L1 -895 5251 4668 4324 30 8 0 chr2 76700987 76701514 -173986340 - L1PA3 LINE L1 -1 6154 5624 30 45 0 0 chr2 76701846 76701890 -173985964 + AT_rich Low_complexity Low_complexity 1 44 0 2357 74 10 13 chr2 76702574 76702873 -173984981 + AluSc SINE Alu 1 298 -11 1942 112 3 26 chr2 76703878 76704190 -173983664 - AluY SINE Alu -6 305 1 903 147 7 0 chr2 76704507 76704643 -173983211 + FRAM SINE Alu 28 164 -12 1955 196 86 46 chr2 76704735 76705237 -173982617 + MLT1F LTR MaLR 21 549 0 1387 205 32 93 chr2 76705258 76705633 -173982221 - MLT1C LTR MaLR 0 467 128 3397 153 4 4 chr2 76705633 76706190 -173981664 - MER41D LTR ERV1 0 557 1 1387 205 32 93 chr2 76706190 76706311 -173981543 - MLT1C LTR MaLR -339 128 1 381 238 9 48 chr2 76706315 76706420 -173981434 - MLT1J LTR MaLR -85 426 326 189 0 0 0 chr2 76707017 76707038 -173980816 + (TTCC)n Simple_repeat Simple_repeat 3 23 0 289 77 58 0 chr2 76707241 76707293 -173980561 + CT-rich Low_complexity Low_complexity 3 57 0 785 202 6 18 chr2 76707293 76707461 -173980393 - FRAM SINE Alu 0 166 1 366 203 14 0 chr2 76707464 76707533 -173980321 - MER5A DNA MER1_type -5 184 115 2030 144 0 7 chr2 76708084 76708382 -173979472 - AluJo SINE Alu -16 296 1 2101 111 7 14 chr2 76709764 76710083 -173977771 + AluSc SINE Alu 1 317 0 254 339 46 0 chr2 76710507 76710616 -173977238 + MIR3 SINE MIR 94 207 -1 2234 118 0 14 chr2 76710899 76711196 -173976658 - AluSx SINE Alu -19 293 1 297 200 114 38 chr2 76711227 76711332 -173976522 - MIR SINE MIR -65 143 31 1916 145 3 13 chr2 76711732 76712043 -173975811 - AluJb SINE Alu -4 308 1 843 294 32 4 chr2 76712801 76713053 -173974801 - MIR SINE MIR -1 261 3 372 226 57 12 chr2 76714867 76715023 -173972831 - MIR SINE MIR -14 248 1 294 281 53 9 chr2 76715965 76716079 -173971775 + MIR SINE MIR 133 251 -11 367 233 158 8 chr2 76716121 76716361 -173971493 + HAL1b LINE L1 590 865 -483 1578 155 16 0 chr2 76716563 76716821 -173971033 - AluJo SINE Alu -12 300 39 2158 109 0 0 chr2 76716821 76717096 -173970758 - AluSx SINE Alu -37 275 1 726 248 58 0 chr2 76717103 76717309 -173970545 - L1MD2 LINE L1 -1 6358 6141 5563 132 9 17 chr2 76717331 76718196 -173969658 - L1MA5 LINE L1 0 6300 5443 361 302 171 38 chr2 76718516 76718600 -173969254 - HAL1b LINE L1 -512 836 765 2785 101 3 6 chr2 76718600 76718956 -173968898 + THE1A LTR MaLR 1 355 0 361 302 171 38 chr2 76718956 76719215 -173968639 - HAL1b LINE L1 -583 765 447 433 302 103 37 chr2 76719333 76719984 -173967870 + L1MEd LINE L1 864 1648 -842 697 191 204 7 chr2 76720555 76720707 -173967147 + FRAM SINE Alu 1 175 -1 2374 81 6 28 chr2 76720709 76721029 -173966825 + AluSp SINE Alu 1 313 0 441 305 77 26 chr2 76721029 76721324 -173966530 + L1MEd LINE L1 2302 2629 -3500 589 194 240 0 chr2 76721324 76721453 -173966401 + FRAM SINE Alu 1 160 -6 441 305 77 26 chr2 76721453 76721610 -173966244 + L1MEd LINE L1 2629 2777 -3352 632 211 62 0 chr2 76721610 76721738 -173966116 - MER58B DNA MER1_type -15 326 191 484 332 89 0 chr2 76722487 76722677 -173965177 - MIR SINE MIR -4 258 52 446 286 72 86 chr2 76722745 76723175 -173964679 + L1ME LINE L1 156 579 -5626 2200 241 85 31 chr2 76723334 76724277 -173963577 + L1ME LINE L1 571 1462 -4753 311 0 0 25 chr2 76724277 76724317 -173963537 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1783 159 3 21 chr2 76724321 76724604 -173963250 - AluJo SINE Alu -33 279 2 2200 241 85 31 chr2 76724604 76724655 -173963199 + L1ME LINE L1 1464 1601 -4614 253 188 30 40 chr2 76724652 76724753 -173963101 + L1ME LINE L1 2157 2256 -4140 * 1689 136 42 103 chr2 76724754 76725085 -173962769 + AluJb SINE Alu 1 311 -1 1327 153 42 13 chr2 76725134 76725370 -173962484 + AluJo SINE Alu 52 294 -18 1153 191 8 39 chr2 76725390 76725646 -173962208 + L1MB7 LINE L1 4794 5041 -1105 * 3846 193 35 28 chr2 76725627 76726509 -173961345 - L1M4 LINE L1 -1486 4660 3773 1574 190 3 12 chr2 76726508 76726835 -173961019 + L1MB7 LINE L1 5079 5402 -744 * 792 172 16 0 chr2 76726835 76726957 -173960897 + FLAM_C SINE Alu 1 124 -19 1404 147 0 0 chr2 76726958 76727176 -173960678 + L1MB7 LINE L1 5391 5608 -576 1505 146 0 8 chr2 76727176 76727419 -173960435 + L1MB3 LINE L1 5940 6183 0 3394 162 31 0 chr2 76727419 76727989 -173959865 + L1MB7 LINE L1 5593 6183 -1 287 216 288 24 chr2 76727990 76728115 -173959739 + HAL1b LINE L1 1191 1348 0 323 219 15 109 chr2 76729002 76729063 -173958791 + L2 LINE L2 804 846 -2468 2214 98 6 19 chr2 76729063 76729379 -173958475 - AluSx SINE Alu 0 312 1 323 219 15 109 chr2 76729379 76729454 -173958400 + L2 LINE L2 846 927 -2387 2494 68 0 37 chr2 76729455 76729778 -173958076 - AluSx SINE Alu -1 311 1 959 182 24 0 chr2 76729783 76729953 -173957901 - FRAM SINE Alu -2 174 1 192 337 124 0 chr2 76729954 76730043 -173957811 + L2 LINE L2 918 1017 -2297 2380 234 99 9 chr2 76730722 76731266 -173956588 + MLT1E LTR MaLR 1 593 0 3218 283 87 37 chr2 76731296 76731774 -173956080 - L2 LINE L2 -923 2391 1939 2262 108 0 3 chr2 76731774 76732071 -173955783 + AluSx SINE Alu 1 296 -16 3218 283 87 37 chr2 76732071 76733096 -173954758 - L2 LINE L2 -1375 1939 812 540 0 0 0 chr2 76734224 76734284 -173953570 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 1992 146 0 10 chr2 76734284 76734572 -173953282 - AluJo SINE Alu -27 285 1 2316 95 7 3 chr2 76735000 76735306 -173952548 - AluY SINE Alu -4 307 1 1208 167 11 0 chr2 76735475 76735661 -173952193 + MER5A DNA MER1_type 1 188 -1 2087 107 7 0 chr2 76736281 76736561 -173951293 - AluSx SINE Alu -30 282 1 622 232 119 6 chr2 76736582 76736750 -173951104 + MIR SINE MIR 64 250 -12 379 189 26 85 chr2 76737173 76737326 -173950528 - L1ME4a LINE L1 -18 6103 5960 192 152 0 0 chr2 76737335 76737368 -173950486 + (CA)n Simple_repeat Simple_repeat 1 33 0 2390 97 0 0 chr2 76737390 76737689 -173950165 - AluSx SINE Alu -13 299 1 2635 242 67 20 chr2 76737936 76739327 -173948527 - L1ME3A LINE L1 -24 6146 4693 1147 261 66 6 chr2 76739328 76739646 -173948208 + L1ME3A LINE L1 5490 5826 -344 599 255 147 12 chr2 76739655 76739906 -173947948 + LTR33 LTR ERVL 233 517 -4 378 0 0 0 chr2 76739909 76739951 -173947903 + (CA)n Simple_repeat Simple_repeat 2 43 0 323 304 80 7 chr2 76740088 76740226 -173947628 - MIR SINE MIR -66 196 49 621 155 10 0 chr2 76740271 76740368 -173947486 - MER5B DNA MER1_type -3 175 78 21 71 0 0 chr2 76740377 76740419 -173947435 + AT_rich Low_complexity Low_complexity 1 42 0 280 254 112 71 chr2 76740419 76740616 -173947238 - L1ME3A LINE L1 -1 6169 5965 243 0 0 0 chr2 76740618 76740645 -173947209 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1545 167 0 60 chr2 76740647 76740797 -173947057 - AluJo SINE Alu -30 282 157 2311 101 3 0 chr2 76740797 76741094 -173946760 - AluSq SINE Alu -15 298 1 1545 167 0 60 chr2 76741094 76741243 -173946611 - AluJo SINE Alu -155 157 1 917 252 82 48 chr2 76741409 76741786 -173946068 - L1MC5 LINE L1 -518 7443 7054 721 197 7 13 chr2 76741786 76742049 -173945805 + MLT1A1 LTR MaLR 1 313 -52 26 0 0 0 chr2 76742056 76742082 -173945772 + AT_rich Low_complexity Low_complexity 1 26 0 2239 107 0 0 chr2 76742082 76742371 -173945483 - AluSg SINE Alu -21 289 1 1914 160 0 0 chr2 76742373 76742666 -173945188 - AluJo SINE Alu -19 293 1 373 206 0 0 chr2 76742666 76742729 -173945125 + MLT1A1 LTR MaLR 301 363 -2 244 163 0 0 chr2 76742731 76742774 -173945080 - L1MC5 LINE L1 -903 7058 7016 22 0 0 0 chr2 76742774 76742796 -173945058 + AT_rich Low_complexity Low_complexity 1 22 0 2560 29 0 0 chr2 76742796 76743077 -173944777 - L1PA5 LINE L1 -9 6145 5865 2372 17 41 0 chr2 76743077 76743427 -173944427 + L1P2 LINE L1 5069 5444 -710 332 202 8 101 chr2 76743425 76743544 -173944310 - L1MC5 LINE L1 -931 7030 6923 * 294 302 69 0 chr2 76743633 76743749 -173944105 + L1MC5 LINE L1 7289 7412 -549 * 1080 215 10 67 chr2 76743745 76743905 -173943949 - L1MC5 LINE L1 -1050 6992 6824 5232 138 85 44 chr2 76743905 76744799 -173943055 - MER21A LTR ERV1 0 931 1 1080 215 10 67 chr2 76744799 76744942 -173942912 - L1MC5 LINE L1 -1218 6824 6624 4333 170 34 54 chr2 76745230 76745686 -173942168 + L1MB8 LINE L1 4915 5379 -799 2361 98 0 7 chr2 76745686 76745992 -173941862 + AluSx SINE Alu 1 304 -8 4333 170 34 54 chr2 76745992 76746826 -173941028 + L1MB8 LINE L1 5379 6177 -1 23 33 0 0 chr2 76746878 76746908 -173940946 + AT_rich Low_complexity Low_complexity 1 30 0 2234 98 16 16 chr2 76746959 76747264 -173940590 + AluSx SINE Alu 1 305 -7 327 281 85 35 chr2 76747339 76747538 -173940316 - HAL1b LINE L1 -740 608 400 2349 90 6 3 chr2 76747594 76747905 -173939949 - AluSq SINE Alu -1 312 1 1558 152 46 19 chr2 76747985 76748248 -173939606 - AluSg SINE Alu -30 280 11 2113 104 37 0 chr2 76748354 76748651 -173939203 + AluSx SINE Alu 1 308 -4 334 314 94 63 chr2 76749042 76749297 -173938557 - HAL1b LINE L1 -1025 323 61 566 206 0 0 chr2 76749831 76749938 -173937916 - MER53 DNA DNA -80 109 3 2137 113 3 28 chr2 76750244 76750582 -173937272 - AluSx SINE Alu 0 312 1 429 274 124 17 chr2 76750601 76750842 -173937012 - L1MC5 LINE L1 -1861 5947 5681 265 290 180 54 chr2 76751591 76751908 -173935946 + HERVL LTR ERVL 298 654 -5110 2311 105 0 3 chr2 76752371 76752676 -173935178 + AluSq SINE Alu 1 304 -9 5716 293 69 80 chr2 76752886 76754880 -173932974 + HERVL LTR ERVL 1497 3513 -2251 229 255 20 39 chr2 76754880 76754982 -173932872 - L1MC5 LINE L1 -33 7928 7829 261 0 0 0 chr2 76754982 76755011 -173932843 + (TA)n Simple_repeat Simple_repeat 1 29 0 441 0 0 0 chr2 76755010 76755059 -173932795 + (GA)n Simple_repeat Simple_repeat 2 50 0 5716 293 69 80 chr2 76755011 76755060 -173932794 + HERVL LTR ERVL 3512 3560 -2204 1567 116 149 4 chr2 76755060 76755302 -173932552 - AluSx SINE Alu -35 277 1 5716 293 69 80 chr2 76755302 76756592 -173931262 + HERVL LTR ERVL 3560 4839 -925 1689 193 42 73 chr2 76756592 76757001 -173930853 + MSTD LTR MaLR 1 396 0 5716 293 69 80 chr2 76757001 76757354 -173930500 + HERVL LTR ERVL 4839 5195 -569 22 0 0 0 chr2 76757539 76757561 -173930293 + AT_rich Low_complexity Low_complexity 1 22 0 349 250 45 0 chr2 76757618 76757706 -173930148 - MLT1H1 LTR MaLR 0 555 464 22 0 0 0 chr2 76757744 76757766 -173930088 + AT_rich Low_complexity Low_complexity 1 22 0 476 331 67 16 chr2 76758038 76758292 -173929562 + HERVL LTR ERVL 4105 4371 -1283 180 179 0 0 chr2 76758365 76758404 -173929450 + (CATA)n Simple_repeat Simple_repeat 2 40 0 2223 113 0 0 chr2 76758416 76758717 -173929137 + AluSq SINE Alu 13 313 0 21 82 0 0 chr2 76758744 76758793 -173929061 + AT_rich Low_complexity Low_complexity 1 49 0 244 320 10 20 chr2 76759076 76759176 -173928678 - L2 LINE L2 0 3313 3215 207 114 0 0 chr2 76760193 76760228 -173927626 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1106 211 216 34 chr2 76760236 76760700 -173927154 - L2 LINE L2 -102 3211 2665 474 305 123 21 chr2 76761094 76761281 -173926573 + MIR SINE MIR 24 229 -33 2667 184 21 53 chr2 76761413 76761977 -173925877 + MLT2B3 LTR ERVL 1 546 -8 447 261 15 15 chr2 76762213 76762343 -173925511 - LTR67 LTR ERVL 0 557 428 462 202 271 0 chr2 76762902 76763031 -173924823 - MER5A DNA MER1_type 0 189 26 802 313 132 15 chr2 76763323 76763964 -173923890 - L2 LINE L2 0 3313 2582 610 179 25 16 chr2 76764151 76764318 -173923536 + MLT1A1 LTR MaLR 58 286 -79 * 1230 173 58 36 chr2 76764317 76764594 -173923260 + MSTD LTR MaLR 114 396 0 196 295 0 0 chr2 76764600 76764661 -173923193 + L2 LINE L2 2019 2079 -1235 1431 164 180 13 chr2 76765276 76765587 -173922267 + MLT1A1 LTR MaLR 1 363 -2 407 256 80 0 chr2 76765696 76765821 -173922033 + L2 LINE L2 3171 3305 -8 262 192 0 0 chr2 76765833 76765885 -173921969 + MER89 LTR ERV1 6 57 -502 799 224 0 0 chr2 76765886 76766033 -173921821 + FRAM SINE Alu 1 146 -30 2558 171 26 12 chr2 76766042 76766550 -173921304 + MER89 LTR ERV1 45 559 0 2005 134 3 0 chr2 76766943 76767235 -173920619 - AluSx SINE Alu -19 293 1 2123 97 4 0 chr2 76767316 76767620 -173920234 + AluSg SINE Alu 1 305 0 1454 209 35 6 chr2 76767988 76768303 -173919551 - MLT1A2 LTR MaLR -16 358 35 1825 115 4 0 chr2 76768305 76768557 -173919297 - AluSx SINE Alu -9 303 51 727 274 120 49 chr2 76768874 76769199 -173918655 - L2 LINE L2 0 3313 2966 236 186 17 0 chr2 76769387 76769446 -173918408 + GA-rich Low_complexity Low_complexity 3 62 0 255 200 0 0 chr2 76769911 76769956 -173917898 + L2 LINE L2 3214 3258 -14 668 188 26 0 chr2 76770052 76770169 -173917685 + FLAM_A SINE Alu 13 132 -10 1657 239 48 29 chr2 76770246 76770481 -173917373 - MER90 LTR ERV1 -52 562 333 1734 160 45 0 chr2 76770481 76770769 -173917085 + AluJb SINE Alu 1 301 -11 1657 239 48 29 chr2 76770769 76771057 -173916797 - MER90 LTR ERV1 -281 333 29 342 146 11 45 chr2 76772399 76772488 -173915366 + CT-rich Low_complexity Low_complexity 1 86 0 1442 196 56 7 chr2 76772489 76772774 -173915080 - AluJo SINE Alu -13 299 1 1259 290 52 48 chr2 76772986 76773869 -173913985 - MER110-int LTR ERV1 -1718 2929 2012 38 0 0 0 chr2 76774019 76774057 -173913797 + AT_rich Low_complexity Low_complexity 1 38 0 402 281 122 0 chr2 76774286 76774425 -173913429 + MIR SINE MIR 40 195 -67 272 281 269 6 chr2 76774447 76774607 -173913247 - MIR SINE MIR -48 214 13 219 139 0 0 chr2 76775040 76775076 -173912778 + (CCCCCT)n Simple_repeat Simple_repeat 6 41 0 429 20 0 0 chr2 76775135 76775185 -173912669 + (GGA)n Simple_repeat Simple_repeat 1 50 0 636 171 14 125 chr2 76776142 76776358 -173911496 - MER3 DNA MER1_type 0 209 18 771 318 164 45 chr2 76776427 76777389 -173910465 - L2 LINE L2 -1 3271 2201 4289 142 37 62 chr2 76777502 76778024 -173909830 - L1PA16 LINE L1 -9 6157 5623 580 140 158 0 chr2 76778024 76778138 -173909716 - FLAM_C SINE Alu 0 133 2 4289 142 37 62 chr2 76778138 76778840 -173909014 - L1PA16 LINE L1 -543 5623 4955 2201 93 4 0 chr2 76778935 76779214 -173908640 - AluSg SINE Alu -30 280 1 2219 78 0 29 chr2 76779995 76780301 -173907553 - AluSc SINE Alu -12 297 1 2498 56 3 0 chr2 76780514 76780819 -173907035 - AluY SINE Alu -5 306 1 515 279 97 52 chr2 76781124 76781486 -173906368 - L1M4 LINE L1 -2664 3482 3105 333 0 0 0 chr2 76781487 76781524 -173906330 + (TG)n Simple_repeat Simple_repeat 2 38 0 3047 188 52 23 chr2 76781565 76782433 -173905421 - L1MB8 LINE L1 -2 6176 5244 568 176 42 7 chr2 76782472 76782614 -173905240 - L1MB8 LINE L1 -1074 5072 4926 1024 232 23 4 chr2 76782634 76782893 -173904961 - L1PB4 LINE L1 0 6156 5893 1631 177 30 60 chr2 76782893 76783044 -173904810 - L1MB8 LINE L1 -1227 4919 4765 1919 145 7 16 chr2 76783044 76783347 -173904507 - AluJb SINE Alu -12 300 1 1631 177 30 60 chr2 76783347 76783587 -173904267 - L1MB8 LINE L1 -1381 4765 4540 2027 121 35 0 chr2 76783587 76783876 -173903978 - AluSx SINE Alu -13 299 1 1631 177 30 60 chr2 76783876 76783917 -173903937 - L1MB8 LINE L1 -1606 4540 4499 1519 121 14 57 chr2 76783920 76784202 -173903652 - Tigger3(Golem) DNA MER2_type 0 3032 2763 355 234 0 43 chr2 76784208 76784302 -173903552 + L1MC4 LINE L1 6614 6703 -1339 1877 137 18 0 chr2 76784325 76784603 -173903251 - AluSx SINE Alu -29 283 1 393 231 0 0 chr2 76784603 76784681 -173903173 - Tigger3(Golem) DNA MER2_type -2951 78 1 1909 214 138 20 chr2 76784684 76785098 -173902756 - L1MB8 LINE L1 -1648 4498 4134 1137 60 250 0 chr2 76785098 76785282 -173902572 + MER30 DNA MER1_type 1 230 0 1909 214 138 20 chr2 76785282 76785528 -173902326 - L1MB8 LINE L1 -2012 4134 3918 324 0 0 0 chr2 76785528 76785564 -173902290 + (CA)n Simple_repeat Simple_repeat 2 37 0 1909 214 138 20 chr2 76785564 76785737 -173902117 - L1MB8 LINE L1 -2228 3918 3566 189 0 0 0 chr2 76785775 76785796 -173902058 + (T)n Simple_repeat Simple_repeat 1 21 0 2439 67 0 3 chr2 76785868 76786168 -173901686 - AluY SINE Alu -12 299 1 1914 193 48 30 chr2 76786169 76786672 -173901182 - L1MCa LINE L1 -5884 542 31 1942 114 14 14 chr2 76786686 76786975 -173900879 - AluSq SINE Alu -7 306 18 597 195 47 0 chr2 76786984 76787112 -173900742 - L1MC1 LINE L1 -1 6332 6199 7203 229 52 22 chr2 76787120 76788072 -173899782 - L1M4 LINE L1 -912 5470 4548 2242 92 0 30 chr2 76788072 76788375 -173899479 - AluSg SINE Alu -16 294 1 7203 229 52 22 chr2 76788375 76788521 -173899333 - L1M4 LINE L1 -1834 4548 4408 2330 164 48 19 chr2 76788521 76788935 -173898919 - MSTB LTR MaLR 0 426 1 7203 229 52 22 chr2 76788935 76789171 -173898683 - L1M4 LINE L1 -1974 4408 4180 1834 153 7 26 chr2 76789171 76789478 -173898376 - AluJb SINE Alu -11 301 1 7203 229 52 22 chr2 76789478 76790019 -173897835 - L1M4 LINE L1 -2202 4180 3657 1947 160 3 0 chr2 76790019 76790319 -173897535 - AluSx SINE Alu -11 301 1 7203 229 52 22 chr2 76790319 76790797 -173897057 - L1M4 LINE L1 -2725 3657 3044 1856 210 131 19 chr2 76790808 76791245 -173896609 - L1MA9 LINE L1 -38 6274 5751 380 82 16 0 chr2 76791245 76791306 -173896548 + (TG)n Simple_repeat Simple_repeat 2 63 0 1856 210 131 19 chr2 76791306 76791485 -173896369 - L1MA9 LINE L1 -561 5751 5593 1937 142 48 0 chr2 76791503 76791792 -173896062 - AluSx SINE Alu -9 303 1 9271 201 67 58 chr2 76791927 76792971 -173894883 - L1MA9 LINE L1 -812 5334 4302 2081 130 7 3 chr2 76792971 76793271 -173894583 - AluSx SINE Alu -11 301 1 9271 201 67 58 chr2 76793271 76793972 -173893882 - L1MA9 LINE L1 -1844 4302 3609 2104 145 0 6 chr2 76793972 76794283 -173893571 - AluJb SINE Alu 0 312 4 9271 201 67 58 chr2 76794283 76795643 -173892211 - L1MA9 LINE L1 -2537 3609 2198 1320 202 189 37 chr2 76795671 76795916 -173891938 - L1M4 LINE L1 -4051 2333 2126 1520 131 9 5 chr2 76795916 76796137 -173891717 - AluSx SINE Alu -90 222 1 1320 202 189 37 chr2 76796137 76796219 -173891635 - L1M4 LINE L1 -4258 2126 2058 2306 123 59 50 chr2 76796219 76796641 -173891213 - MSTC LTR MaLR -2 426 1 1320 202 189 37 chr2 76796641 76796906 -173890948 - L1M4 LINE L1 -4326 2058 1650 1210 115 0 0 chr2 76796907 76797064 -173890790 - AluSx SINE Alu -149 163 7 22 35 0 0 chr2 76798037 76798066 -173889788 + AT_rich Low_complexity Low_complexity 1 29 0 1934 148 10 19 chr2 76798077 76798388 -173889466 - AluJo SINE Alu -4 308 1 617 205 16 8 chr2 76798500 76798622 -173889232 - FLAM_C SINE Alu -17 126 4 1155 41 5 55 chr2 76798624 76798874 -173888980 - Charlie1 DNA MER1_type -23 2738 2477 1550 181 68 138 chr2 76798874 76799319 -173888535 - MLT2B1 LTR ERVL 0 520 120 2280 109 3 10 chr2 76799319 76799632 -173888222 + AluSx SINE Alu 1 311 -1 1550 181 68 138 chr2 76799632 76799745 -173888109 - MLT2B1 LTR ERVL -400 120 1 1155 41 5 55 chr2 76799745 76799926 -173887928 - Charlie1 DNA MER1_type -284 2477 2 1955 185 75 23 chr2 76800233 76800676 -173887178 + MLT1C LTR MaLR 1 466 -1 288 246 32 63 chr2 76801153 76801279 -173886575 + L2 LINE L2 1716 1837 -1477 3029 219 126 48 chr2 76801304 76801720 -173886134 - L1MC4 LINE L1 -743 5403 5021 2201 100 10 26 chr2 76801720 76802031 -173885823 + AluSx SINE Alu 1 306 -6 3029 219 126 48 chr2 76802031 76802639 -173885215 - L1MC4 LINE L1 -1125 5021 4926 1023 193 18 61 chr2 76802639 76802867 -173884987 - MER20 DNA MER1_type 0 219 2 3029 219 126 48 chr2 76802867 76803730 -173884124 - L1MC4 LINE L1 -1220 4926 4132 442 293 88 24 chr2 76803793 76803998 -173883856 + L2 LINE L2 1894 2111 -1203 314 281 83 0 chr2 76804232 76804328 -173883526 + L2 LINE L2 2179 2282 -1032 1134 295 176 15 chr2 76804523 76805238 -173882616 - L2 LINE L2 -1621 1693 864 1390 188 32 14 chr2 76806048 76806325 -173881529 + AluJo SINE Alu 22 303 -9 555 95 32 42 chr2 76806797 76806892 -173880962 + FLAM_A SINE Alu 36 129 -13 805 204 52 129 chr2 76807103 76807451 -173880403 + MER5C DNA MER1_type 1 321 -3 219 296 42 14 chr2 76808932 76809003 -173878851 - MIR SINE MIR -102 160 88 244 245 36 101 chr2 76809250 76809389 -173878465 + L3 LINE CR1 1174 1303 -274 217 200 231 0 chr2 76809387 76809452 -173878402 - L2 LINE L2 0 3272 3193 * 584 232 215 6 chr2 76809532 76809709 -173878145 + MER58C DNA MER1_type 1 214 -1 281 335 151 33 chr2 76809729 76809941 -173877913 + L3 LINE CR1 1338 1574 -3 381 238 0 59 chr2 76810772 76810873 -173876981 - L2 LINE L2 0 3313 3219 1682 198 124 7 chr2 76811182 76811642 -173876212 - Charlie1b DNA MER1_type 0 523 10 647 285 83 37 chr2 76811686 76811928 -173875926 + MIR SINE MIR 10 262 0 1822 190 0 0 chr2 76812979 76813289 -173874565 - AluJo SINE Alu -2 310 1 35 54 0 0 chr2 76813582 76813638 -173874216 + AT_rich Low_complexity Low_complexity 1 56 0 1449 61 0 0 chr2 76816723 76816903 -173870951 - L1PA7 LINE L1 -21 6133 5954 26 50 0 0 chr2 76817228 76817268 -173870586 + AT_rich Low_complexity Low_complexity 1 40 0 446 256 121 72 chr2 76817359 76817582 -173870272 - MIR SINE MIR -28 234 1 349 293 108 6 chr2 76818215 76818372 -173869482 + MIR SINE MIR 54 226 -36 2220 118 0 3 chr2 76818493 76818797 -173869057 - AluSq SINE Alu -10 303 1 2443 67 0 0 chr2 76819292 76819590 -173868264 - AluY SINE Alu -13 298 1 345 136 25 12 chr2 76819747 76819762 -173868092 + (TA)n Simple_repeat Simple_repeat 1 14 -68 1954 149 55 3 chr2 76819762 76820091 -173867763 + MER7A DNA MER2_type 3 346 0 345 136 25 12 chr2 76820091 76820156 -173867698 + (TA)n Simple_repeat Simple_repeat 14 82 0 1028 162 27 68 chr2 76820228 76820450 -173867404 - MER20 DNA MER1_type 0 219 7 21 57 0 0 chr2 76821579 76821614 -173866240 + AT_rich Low_complexity Low_complexity 1 35 0 1649 155 33 33 chr2 76821641 76822002 -173865852 - MLT1A1 LTR MaLR 0 365 5 263 328 12 65 chr2 76822579 76822826 -173865028 - L2 LINE L2 -1913 1401 1168 402 194 0 0 chr2 76823190 76823257 -173864597 + AluJ/FLAM SINE Alu 1 67 -245 2756 257 62 19 chr2 76823257 76824392 -173863462 - L1MEc LINE L1 -2549 4408 3225 911 157 46 7 chr2 76824392 76824545 -173863309 - AluSg/x SINE Alu -22 290 132 793 293 40 34 chr2 76824548 76825175 -173862679 - L1MEc LINE L1 -3726 3231 2638 1437 180 53 21 chr2 76825181 76825465 -173862389 - AluJo SINE Alu -14 298 6 2154 254 69 33 chr2 76825534 76826642 -173861212 - L1MEc LINE L1 -4551 2408 1262 1537 235 43 23 chr2 76826657 76827049 -173860805 - L1MEc LINE L1 -6027 832 433 1619 242 71 30 chr2 76827274 76827765 -173860089 + LTR53 LTR ERVL 1 511 -8 316 264 99 0 chr2 76828424 76828545 -173859309 - L1MDb LINE L1 -3689 2955 2823 1603 178 13 36 chr2 76828554 76828999 -173858855 - AluJo SINE Alu 0 438 1 668 193 97 38 chr2 76829037 76829119 -173858735 - L1MDb LINE L1 -3890 2754 2678 2123 107 0 0 chr2 76829119 76829400 -173858454 - AluSc SINE Alu -10 299 19 668 193 97 38 chr2 76829400 76829555 -173858299 - L1MDb LINE L1 -3966 2678 2503 2228 98 0 7 chr2 76829565 76829862 -173857992 - AluSx SINE Alu -17 295 1 486 177 51 19 chr2 76829862 76830015 -173857839 - L1MDb LINE L1 -4858 1786 1539 213 132 0 0 chr2 76830030 76830068 -173857786 + (TC)n Simple_repeat Simple_repeat 1 38 0 1627 128 8 4 chr2 76830068 76830302 -173857552 - AluSq SINE Alu -78 235 1 1318 206 87 9 chr2 76830302 76830637 -173857217 - L1MDb LINE L1 -5394 1253 893 249 348 54 11 chr2 76830685 76830777 -173857077 - L1MDb LINE L1 -5645 1002 907 462 203 29 170 chr2 76831093 76831369 -173856485 - L1MDb LINE L1 -6200 444 208 24 53 0 0 chr2 76831674 76831712 -173856142 + AT_rich Low_complexity Low_complexity 1 38 0 918 157 0 0 chr2 76831712 76831852 -173856002 + MER46A DNA MER2_type 1 140 -96 241 263 113 12 chr2 76831907 76831987 -173855867 - MIR SINE MIR -92 170 83 455 355 162 6 chr2 76832310 76832952 -173854902 + L2 LINE L2 2174 2975 -339 293 296 114 51 chr2 76833114 76833290 -173854564 + L2 LINE L2 3086 3272 0 22 56 0 0 chr2 76834467 76834503 -173853351 + AT_rich Low_complexity Low_complexity 1 36 0 1659 139 26 20 chr2 76834677 76834979 -173852875 - L1MA3 LINE L1 0 6305 6002 532 206 28 9 chr2 76836327 76836434 -173851420 + MER5A DNA MER1_type 9 117 -72 511 180 144 54 chr2 76836537 76836704 -173851150 + L2 LINE L2 3132 3313 0 730 220 105 5 chr2 76837018 76837218 -173850636 + LTR40c LTR ERVL 234 453 -12 228 277 0 0 chr2 76837378 76837443 -173850411 - L1ME LINE L1 -422 5699 5635 1526 187 8 0 chr2 76845344 76845595 -173842259 - AluJo SINE Alu -54 258 6 399 274 58 16 chr2 76846113 76846303 -173841551 - L1ME3A LINE L1 -230 5940 5743 359 311 16 0 chr2 76846323 76846445 -173841409 + MIR SINE MIR 139 262 0 713 297 93 91 chr2 76846802 76847137 -173840717 - L3 LINE CR1 -410 1167 829 1983 113 0 39 chr2 76847137 76847421 -173840433 - AluSx SINE Alu -19 293 21 713 297 93 91 chr2 76847421 76847634 -173840220 - L3 LINE CR1 -748 829 618 2315 106 0 3 chr2 76847649 76847952 -173839902 + AluSx SINE Alu 1 302 -10 378 235 137 13 chr2 76848128 76848281 -173839573 - L1ME4a LINE L1 -208 5913 5742 706 275 186 25 chr2 76848281 76848678 -173839176 - L2 LINE L2 -1 3312 2852 811 261 34 25 chr2 76848696 76848934 -173838920 + MER20B DNA MER1_type 1 240 -543 3373 232 99 15 chr2 76848947 76850026 -173837828 - L1MC4 LINE L1 -405 7637 6468 247 208 13 0 chr2 76850110 76850187 -173837667 - L1M4 LINE L1 -3169 2977 2900 252 286 18 27 chr2 76850209 76850321 -173837533 + L1ME3 LINE L1 1552 1662 -4734 43371 38 5 11 chr2 76850352 76856543 -173831311 + L1PA4 LINE L1 3 6152 -3 2263 255 82 16 chr2 76856870 76857989 -173829865 + L1ME3 LINE L1 5028 6229 -2 377 220 70 59 chr2 76858024 76858210 -173829644 + L1MB1 LINE L1 4357 4544 -1602 684 134 174 7 chr2 76858247 76858259 -173829595 - L1M4c LINE L1 -3886 2498 2489 1907 149 34 6 chr2 76858259 76858608 -173829246 - L1MB3 LINE L1 0 6183 5825 684 134 174 7 chr2 76858608 76858744 -173829110 - L1M4c LINE L1 -3895 2489 2325 347 285 86 27 chr2 76859117 76859373 -173828481 + L1M4 LINE L1 3085 3355 -2791 3361 214 103 13 chr2 76859922 76861169 -173826685 - L1 LINE L1 -2820 3562 2185 3921 144 39 52 chr2 76861215 76862117 -173825737 + L1MB1 LINE L1 5127 6027 -141 3619 249 126 46 chr2 76862398 76863965 -173823889 + L1M4 LINE L1 17 1708 -4834 24 53 0 0 chr2 76864116 76864154 -173823700 + AT_rich Low_complexity Low_complexity 1 38 0 351 0 0 0 chr2 76864263 76864302 -173823552 + (TG)n Simple_repeat Simple_repeat 2 40 0 748 242 0 0 chr2 76864373 76864534 -173823320 - AluJb SINE Alu -19 293 133 3102 186 111 23 chr2 76864671 76865765 -173822089 - L1MB8 LINE L1 -5 6173 4983 4451 168 16 30 chr2 76865775 76866706 -173821148 - L1MB2 LINE L1 0 6171 5254 459 229 54 38 chr2 76866720 76866918 -173820936 - MER6 DNA MER2_type 0 865 -65 3051 244 150 19 chr2 76866918 76868085 -173819769 - L1MB2 LINE L1 -905 5241 3922 3346 53 0 2 chr2 76868520 76868990 -173818864 - L1PA8 LINE L1 0 6172 5746 4220 183 27 7 chr2 76869038 76869964 -173817890 - L1MD1 LINE L1 0 6636 5692 40325 37 23 1 chr2 76869969 76875991 -173811863 - L1PA2 LINE L1 -1 6154 1 273 173 0 173 chr2 76875991 76876147 -173811707 - L1MD1 LINE L1 -813 5727 5599 1885 198 32 7 chr2 76876249 76876658 -173811196 - L1MD1 LINE L1 -6078 462 44 1811 151 22 19 chr2 76876658 76876969 -173810885 + AluJb SINE Alu 1 312 0 7268 177 116 27 chr2 76876969 76878581 -173809273 - MER52A LTR ERV1 0 1755 1 350 279 99 19 chr2 76878839 76879000 -173808854 - MLT1J1 LTR MaLR -45 401 228 440 285 48 43 chr2 76879072 76879279 -173808575 - MLT1J LTR MaLR -299 212 5 213 94 0 0 chr2 76881755 76881787 -173806067 + (TC)n Simple_repeat Simple_repeat 2 33 0 559 230 58 0 chr2 76881815 76881954 -173805900 + L1MC4a LINE L1 7203 7349 -459 207 360 34 0 chr2 76882223 76882312 -173805542 - MIR SINE MIR -49 213 122 244 308 205 0 chr2 76882416 76882533 -173805321 + MIR3 SINE MIR 47 187 -21 1361 146 29 0 chr2 76882641 76882846 -173805008 - AluSg/x SINE Alu -19 293 83 368 343 52 8 chr2 76883089 76883223 -173804631 - MIR SINE MIR -97 165 26 279 0 0 0 chr2 76883237 76883268 -173804586 + (CA)n Simple_repeat Simple_repeat 2 32 0 243 174 46 37 chr2 76883278 76883331 -173804523 + (TA)n Simple_repeat Simple_repeat 2 53 -58 2182 107 10 0 chr2 76883331 76883621 -173804233 + AluSp SINE Alu 1 293 -20 243 174 46 37 chr2 76883621 76883676 -173804178 + (TA)n Simple_repeat Simple_repeat 53 111 0 319 136 61 15 chr2 76883678 76883744 -173804110 - L1MD3 LINE L1 -9 7986 7918 765 278 125 51 chr2 76883744 76884233 -173803621 - MLT1F LTR MaLR -8 534 10 2360 218 177 49 chr2 76884234 76885108 -173802746 - L1MD3 LINE L1 -73 8316 7555 2290 95 0 3 chr2 76885108 76885426 -173802428 - AluSx SINE Alu 0 317 1 2360 218 177 49 chr2 76885426 76886971 -173800883 - L1MD3 LINE L1 -834 7555 5521 495 232 73 20 chr2 76886987 76887138 -173800716 - L1MD3 LINE L1 -4659 1881 1723 863 83 15 15 chr2 76887194 76887326 -173800528 - L1PB2 LINE L1 -2 6149 6018 1006 109 109 0 chr2 76887342 76887516 -173800338 - Tigger1 DNA MER2_type 0 2418 2226 1513 89 43 0 chr2 76887547 76887782 -173800072 - L1PB2 LINE L1 -263 5888 5644 1797 123 82 3 chr2 76887837 76888153 -173799701 - Tigger1 DNA MER2_type 0 2418 2078 5391 90 33 39 chr2 76888164 76888402 -173799452 - L1MA1 LINE L1 0 6302 6064 180 0 0 0 chr2 76888402 76888422 -173799432 + (TG)n Simple_repeat Simple_repeat 1 20 0 5391 90 33 39 chr2 76888422 76889063 -173798791 - L1MA1 LINE L1 -238 6064 5428 1771 208 0 7 chr2 76889074 76889477 -173798377 - L1MA1 LINE L1 -826 5320 4921 1964 179 46 14 chr2 76889561 76889975 -173797879 + MSTB1 LTR MaLR 6 432 0 321 293 47 83 chr2 76889976 76890229 -173797625 - L1MD3 LINE L1 -5409 1134 891 242 246 14 0 chr2 76890704 76890773 -173797081 - L1MD3 LINE L1 -5935 595 526 2509 236 86 43 chr2 76890834 76892591 -173795263 - L1ME LINE L1 -615 5547 3847 423 301 97 0 chr2 76892794 76892980 -173794874 - L1MC4 LINE L1 -143 7899 7696 5476 39 0 12 chr2 76892980 76893650 -173794204 - L1PA3 LINE L1 0 6155 5494 301 229 62 0 chr2 76893778 76893874 -173793980 - L1MC4 LINE L1 -714 7328 7227 1738 223 59 66 chr2 76893986 76894651 -173793203 - L1MD2 LINE L1 -38 6321 5662 * 28418 100 21 83 chr2 76894627 76898085 -173789769 - L1PA7 LINE L1 -2 6152 2482 2358 81 13 10 chr2 76898085 76898395 -173789459 - AluY SINE Alu 0 311 1 28418 100 21 83 chr2 76898395 76899250 -173788604 - L1PA7 LINE L1 -3672 2482 1576 180 0 0 0 chr2 76899250 76899270 -173788584 + (TTA)n Simple_repeat Simple_repeat 2 21 0 28418 100 21 83 chr2 76899270 76901512 -173786342 - L1PA7 LINE L1 -4578 1576 12 1446 188 66 65 chr2 76901524 76901571 -173786283 - L1MD2 LINE L1 -665 5694 5649 981 224 49 0 chr2 76901571 76901776 -173786078 + MER20 DNA MER1_type 1 215 -4 1446 188 66 65 chr2 76901776 76901952 -173785902 - L1MD2 LINE L1 -710 5649 5475 2221 93 0 59 chr2 76901952 76902273 -173785581 - AluSg SINE Alu -8 302 1 1446 188 66 65 chr2 76902273 76902525 -173785329 - L1MD2 LINE L1 -884 5475 5222 1077 219 79 11 chr2 76902545 76902823 -173785031 - L1MC4 LINE L1 -994 7048 6752 488 264 10 16 chr2 76903932 76904125 -173783729 - L1M4b LINE L1 -3821 3136 2945 477 260 83 17 chr2 76904152 76904440 -173783414 - L1M4b LINE L1 -4240 2898 2592 210 284 25 0 chr2 76904442 76904523 -173783331 + (TA)n Simple_repeat Simple_repeat 2 84 0 319 262 221 11 chr2 76904523 76904738 -173783116 - L1M4b LINE L1 -4512 2445 2255 377 295 70 8 chr2 76904782 76905023 -173782831 - L1M4b LINE L1 -4832 2023 1768 414 301 109 41 chr2 76905026 76905375 -173782479 - L1M4b LINE L1 -5237 1622 1352 1517 221 37 7 chr2 76905399 76905659 -173782195 + L1 LINE L1 3064 3344 -2802 333 0 0 0 chr2 76905659 76905696 -173782158 + (CA)n Simple_repeat Simple_repeat 2 38 0 1517 221 37 7 chr2 76905696 76905864 -173781990 + L1 LINE L1 3344 3505 -2641 * 2681 150 17 4 chr2 76905852 76906427 -173781427 + L1P4 LINE L1 5156 5736 -430 1678 176 20 7 chr2 76907137 76907438 -173780416 - AluJo SINE Alu -7 305 1 350 172 65 11 chr2 76907438 76907531 -173780323 - L1MD3 LINE L1 -16 7979 7882 2332 111 0 9 chr2 76907532 76907848 -173780006 - AluSq SINE Alu 0 313 1 4953 133 39 7 chr2 76907850 76908918 -173778936 - L1PA14 LINE L1 -4 6157 5047 356 162 81 0 chr2 76908921 76908995 -173778859 - L1MD3 LINE L1 -487 7508 7429 239 255 0 75 chr2 76909010 76909116 -173778738 - MLT1F1 LTR MaLR -429 138 41 253 231 0 13 chr2 76909121 76909199 -173778655 - L1MD3 LINE L1 -880 7115 7039 360 247 296 24 chr2 76910549 76910802 -173777052 - MLT1J2 LTR MaLR -138 308 1 22 35 0 0 chr2 76911205 76911234 -173776620 + AT_rich Low_complexity Low_complexity 1 29 0 2249 74 0 45 chr2 76911517 76911828 -173776026 + AluY SINE Alu 1 297 -14 2446 84 3 0 chr2 76912530 76912829 -173775025 - AluSc SINE Alu -9 300 1 23 0 0 0 chr2 76913311 76913334 -173774520 + AT_rich Low_complexity Low_complexity 1 23 0 2284 85 0 36 chr2 76913547 76913853 -173774001 + AluSx SINE Alu 1 295 -17 334 338 40 5 chr2 76914091 76914292 -173773562 + L1M4 LINE L1 4405 4612 -1534 12109 152 24 26 chr2 76914339 76914508 -173773346 - L1MA3 LINE L1 0 7724 7556 2231 101 13 16 chr2 76914508 76914814 -173773040 - AluSx SINE Alu -7 305 1 12109 152 24 26 chr2 76914814 76918780 -173769074 - L1MA3 LINE L1 -168 7556 3576 3884 117 26 17 chr2 76918797 76919102 -173768752 - L1MA3 LINE L1 -5049 2516 2215 2330 109 0 0 chr2 76919102 76919406 -173768448 - AluSx SINE Alu -8 304 1 3884 117 26 17 chr2 76919406 76919760 -173768094 - L1MA3 LINE L1 -5350 2215 1851 1755 137 66 36 chr2 76919760 76920124 -173767730 - THE1C LTR MaLR 0 375 1 9575 122 26 38 chr2 76920124 76921721 -173766133 - THE1C-int LTR MaLR 0 1580 4 802 102 66 60 chr2 76921724 76921891 -173765963 - THE1C LTR MaLR 0 375 208 7437 150 36 4 chr2 76922014 76923305 -173764549 - L1MA3 LINE L1 -5719 1846 514 260 228 54 42 chr2 76923517 76923622 -173764232 - MLT1J LTR MaLR -288 199 56 22 0 0 0 chr2 76924083 76924105 -173763749 + AT_rich Low_complexity Low_complexity 1 22 0 335 242 21 32 chr2 76924170 76924265 -173763589 + L1ME4a LINE L1 5968 6061 -60 357 301 58 26 chr2 76924297 76924453 -173763401 + L3 LINE CR1 1259 1419 -158 346 262 38 110 chr2 76924451 76924768 -173763086 + L2 LINE L2 3019 3312 -1 * 232 216 0 20 chr2 76925185 76925236 -173762618 - MER119 DNA MER1_type -3 580 531 589 234 162 4 chr2 76925368 76925656 -173762198 - MER119 DNA MER1_type -182 401 40 3319 231 54 21 chr2 76926797 76927711 -173760143 + L1M4 LINE L1 106 1049 -5493 2052 153 3 0 chr2 76927711 76928018 -173759836 + AluJo SINE Alu 1 308 -4 988 214 12 8 chr2 76928019 76928382 -173759472 + L1MB3 LINE L1 5116 5481 -702 40850 47 6 1 chr2 76928387 76934512 -173753342 + L1PA4 LINE L1 4 6153 -2 3719 156 49 0 chr2 76934525 76935158 -173752696 + L1MB3 LINE L1 5477 6146 -37 2299 120 3 0 chr2 76935158 76935467 -173752387 - AluSq SINE Alu -3 310 1 3719 156 49 0 chr2 76935467 76935507 -173752347 + L1MB3 LINE L1 6146 6183 0 529 346 83 31 chr2 76936384 76936803 -173751051 - L2 LINE L2 0 3313 2873 1743 148 107 23 chr2 76936808 76936952 -173750902 - LTR54B LTR ERV1 -22 476 346 1638 192 102 3 chr2 76936952 76937285 -173750569 + MER47A DNA MER2_type 1 366 0 1743 148 107 23 chr2 76937285 76937579 -173750275 - LTR54B LTR ERV1 -152 346 1 959 282 108 68 chr2 76937584 76938140 -173749714 - L2 LINE L2 -455 2859 2282 300 273 15 0 chr2 76938652 76938718 -173749136 + MER91 DNA MER1_type 124 190 0 292 270 235 39 chr2 76938725 76938955 -173748899 - L2 LINE L2 -1034 2280 2006 2059 126 0 0 chr2 76939824 76940146 -173747708 - AluSx SINE Alu 0 322 1 1778 156 0 59 chr2 76940824 76941145 -173746709 - AluJo SINE Alu -10 302 1 21 0 0 0 chr2 76941154 76941175 -173746679 + AT_rich Low_complexity Low_complexity 1 21 0 566 273 0 73 chr2 76941187 76941407 -173746447 + MER102b DNA MER1_type 128 331 -10 2340 87 7 3 chr2 76941412 76941722 -173746132 - AluSq SINE Alu -2 311 1 1198 42 0 0 chr2 76942043 76942187 -173745667 - L1PA3 LINE L1 -3 6152 6009 1022 230 191 99 chr2 76942799 76944106 -173743748 + HAL1 LINE L1 1075 2501 -6 411 266 119 35 chr2 76944135 76944361 -173743493 + L1ME2 LINE L1 2272 2516 -3630 2059 64 0 30 chr2 76944410 76944675 -173743179 + AluY SINE Alu 1 257 -54 498 291 122 25 chr2 76944917 76945677 -173742177 + L1ME2 LINE L1 4400 5233 -913 427 295 137 17 chr2 76945691 76945932 -173741922 + L1ME2 LINE L1 5679 5948 -216 2171 106 10 0 chr2 76946686 76946988 -173740866 - AluSx SINE Alu -7 305 1 1296 255 113 15 chr2 76947791 76948250 -173739604 - MLT1J LTR MaLR -7 504 1 206 216 0 0 chr2 76949144 76949195 -173738659 + (TG)n Simple_repeat Simple_repeat 2 52 0 2762 177 26 67 chr2 76949734 76950829 -173737025 + L1MB2 LINE L1 4856 5918 -253 804 250 21 25 chr2 76950836 76951116 -173736738 - LTR4 LTR ERV1 0 596 318 260 204 53 88 chr2 76951365 76951478 -173736376 - LTR4 LTR ERV1 -481 115 7 1087 189 25 1 chr2 76951494 76951744 -173736110 + L1MB2 LINE L1 5924 6181 -8 301 286 98 51 chr2 76951959 76952128 -173735726 + HAL1b LINE L1 55 215 -1133 333 0 0 0 chr2 76952128 76952165 -173735689 + (TATG)n Simple_repeat Simple_repeat 2 38 0 983 179 0 0 chr2 76952165 76952316 -173735538 - FRAM SINE Alu -15 151 1 301 286 98 51 chr2 76952316 76952460 -173735394 + HAL1b LINE L1 214 384 -964 2267 112 3 0 chr2 76952592 76952888 -173734966 + AluSp SINE Alu 1 297 -16 322 281 137 24 chr2 76952906 76953155 -173734699 + L1MDa LINE L1 2370 2646 -3894 2532 70 0 3 chr2 76953427 76953739 -173734115 + AluY SINE Alu 1 311 0 216 86 0 0 chr2 76954018 76954053 -173733801 + (TG)n Simple_repeat Simple_repeat 1 35 0 585 179 197 51 chr2 76954119 76954170 -173733684 - L1MB8 LINE L1 0 6178 6136 2149 145 0 0 chr2 76954170 76954474 -173733380 + AluSx SINE Alu 1 304 -8 585 179 197 51 chr2 76954474 76954656 -173733198 - L1MB8 LINE L1 -42 6136 5911 336 319 50 99 chr2 76954662 76955066 -173732788 + L1MEd LINE L1 268 651 -5468 4590 170 55 12 chr2 76955171 76956159 -173731695 + L1MC3 LINE L1 6756 7785 0 2181 185 25 2 chr2 76956206 76956611 -173731243 - Tigger7 DNA MER2_type -2073 414 1 2423 201 52 35 chr2 76956650 76957247 -173730607 - MER21B LTR ERV1 -154 709 103 255 233 41 0 chr2 76957403 76957476 -173730378 - MER21B LTR ERV1 -787 76 1 409 285 73 77 chr2 76957980 76958475 -173729379 + L1MC/D LINE L1 5254 5746 -2062 1954 176 0 0 chr2 76958989 76959301 -173728553 - AluSx SINE Alu 0 312 1 2272 125 0 0 chr2 76959924 76960236 -173727618 - AluSx SINE Alu 0 312 1 398 285 42 55 chr2 76960425 76960590 -173727264 + L2 LINE L2 2685 2847 -467 894 298 221 16 chr2 76960683 76961308 -173726546 - L2 LINE L2 -405 2909 2157 533 297 175 17 chr2 76961314 76961674 -173726180 - L2 LINE L2 -1376 1938 1522 234 354 128 12 chr2 76961739 76961903 -173725951 + L2 LINE L2 2923 3105 -208 232 139 0 0 chr2 76961989 76962032 -173725822 - Charlie8 DNA MER1_type -2305 112 70 1096 169 91 43 chr2 76962309 76962563 -173725291 - MLT1A1 LTR MaLR -97 268 3 324 321 0 0 chr2 76962910 76962991 -173724863 - MIR SINE MIR -88 120 40 236 183 183 41 chr2 76965302 76965471 -173722383 + Charlie7 DNA MER1_type 2420 2612 0 21 0 0 0 chr2 76965504 76965525 -173722329 + AT_rich Low_complexity Low_complexity 1 21 0 3117 168 42 19 chr2 76965680 76966306 -173721548 - L1MB5 LINE L1 -14 6160 5521 2864 187 28 18 chr2 76966319 76967243 -173720611 - L1M3 LINE L1 -602 6076 5140 533 240 53 6 chr2 76967243 76967414 -173720440 - L1M3 LINE L1 -1730 4914 4736 1733 193 69 30 chr2 76967429 76967529 -173720325 - L1M3 LINE L1 -2154 4490 4395 2347 105 0 6 chr2 76967529 76967844 -173720010 - AluSq SINE Alu 0 313 1 1733 193 69 30 chr2 76967844 76968319 -173719535 - L1M3 LINE L1 -2249 4395 3892 * 3370 206 86 43 chr2 76968310 76969978 -173717876 - L1M3 LINE L1 -2978 3666 2071 2065 129 33 0 chr2 76969978 76970281 -173717573 - AluSq SINE Alu 0 313 1 2124 87 4 0 chr2 76970281 76970546 -173717308 - AluSx SINE Alu -11 301 36 3370 206 86 43 chr2 76970546 76970995 -173716859 - L1M3 LINE L1 -4572 2072 1455 901 191 23 6 chr2 76970996 76971169 -173716685 - AluJo SINE Alu -5 307 132 3391 232 68 55 chr2 76971172 76972603 -173715251 - L1M3 LINE L1 -5083 1459 10 2213 101 17 3 chr2 76972667 76972963 -173714891 - AluSc SINE Alu -9 300 1 4479 174 31 16 chr2 76973294 76974118 -173713736 - L1MB2 LINE L1 -11 6160 5296 776 183 0 0 chr2 76974118 76974249 -173713605 - AluJo SINE Alu -171 131 1 4479 174 31 16 chr2 76974249 76974895 -173712959 - L1MB2 LINE L1 -875 5296 4661 6900 160 20 10 chr2 76975558 76976314 -173711540 - L1PB2 LINE L1 -1 6150 5403 2216 120 0 7 chr2 76976314 76976615 -173711239 - AluSg SINE Alu -11 299 1 6900 160 20 10 chr2 76976615 76976648 -173711206 - L1PB2 LINE L1 -748 5403 5372 1839 132 0 93 chr2 76976648 76976981 -173710873 - AluSq SINE Alu -11 302 1 6900 160 20 10 chr2 76976981 76977913 -173709941 - L1PB2 LINE L1 -779 5372 4390 231 103 0 0 chr2 76977913 76977952 -173709902 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6900 160 20 10 chr2 76977952 76978651 -173709203 - L1PB2 LINE L1 -1761 4390 3700 2085 208 10 4 chr2 76978653 76979139 -173708715 + L1PB2 LINE L1 3202 3690 -2456 180 200 0 0 chr2 76979916 76979956 -173707898 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 25 65 0 0 chr2 76980003 76980049 -173707805 + AT_rich Low_complexity Low_complexity 1 46 0 302 221 177 27 chr2 76980963 76981117 -173706737 - L1M3 LINE L1 -464 5657 5486 380 295 73 51 chr2 76981368 76981602 -173706252 + L1M4 LINE L1 2588 2826 -3320 2326 77 20 7 chr2 76981798 76982096 -173705758 - AluSg SINE Alu -8 302 1 878 153 0 0 chr2 76982098 76982229 -173705625 - FLAM_A SINE Alu -2 131 1 225 313 107 15 chr2 76982708 76982839 -173705015 - L2 LINE L2 -960 2354 2212 184 348 122 22 chr2 76982963 76983193 -173704661 + L2 LINE L2 540 792 -2522 3396 166 42 20 chr2 76984698 76985396 -173702458 - L1MB8 LINE L1 -11 6167 5455 259 340 145 42 chr2 76985613 76986089 -173701765 - L3 LINE CR1 -7 1570 1046 3952 195 60 26 chr2 76986311 76987593 -173700261 - L1MB8 LINE L1 -32 6146 4783 2236 123 0 0 chr2 76987593 76987893 -173699961 - AluSg SINE Alu -10 300 1 3952 195 60 26 chr2 76987893 76988540 -173699314 - L1MB8 LINE L1 -1395 4783 4159 22 0 0 0 chr2 76988686 76988708 -173699146 + AT_rich Low_complexity Low_complexity 1 22 0 286 274 74 0 chr2 76988795 76988890 -173698964 - MIR SINE MIR -122 140 39 719 332 86 65 chr2 76988959 76989561 -173698293 - L3 LINE CR1 -746 831 217 257 282 39 13 chr2 76989750 76989828 -173698026 - MER5A DNA MER1_type -28 161 82 1668 172 3 0 chr2 76991551 76991847 -173696007 + MER7A DNA MER2_type 18 312 -34 24 32 0 0 chr2 76991856 76991887 -173695967 + AT_rich Low_complexity Low_complexity 1 31 0 207 0 0 0 chr2 76991978 76992001 -173695853 + (TA)n Simple_repeat Simple_repeat 2 24 0 975 223 0 0 chr2 76992001 76992207 -173695647 - AluSg/x SINE Alu -1 311 106 305 280 91 60 chr2 76992687 76992919 -173694935 + L1M4 LINE L1 2588 2826 -3320 599 13 26 0 chr2 76993631 76993707 -173694147 - L1PA4 LINE L1 -2 6153 6076 21 36 0 0 chr2 76993880 76993908 -173693946 + AT_rich Low_complexity Low_complexity 1 28 0 263 238 133 76 chr2 76994377 76994587 -173693267 - L2 LINE L2 -1764 1550 1329 1867 144 50 41 chr2 76995139 76995501 -173692353 + MLT1A1 LTR MaLR 1 365 0 389 238 0 36 chr2 76996104 76996188 -173691666 - FRAM SINE Alu -11 155 75 268 324 89 26 chr2 76996301 76996650 -173691204 + L1ME4a LINE L1 5667 6037 -84 2573 196 22 0 chr2 76996810 76997345 -173690509 - L1MB5 LINE L1 -34 6140 5594 694 168 0 36 chr2 76997361 76997498 -173690356 - FLAM_C SINE Alu -1 132 1 363 151 2 0 chr2 76997499 76997625 -173690229 - L1MB5 LINE L1 -1400 4746 4645 2527 81 0 0 chr2 76997673 76997983 -173689871 - AluSg SINE Alu 0 310 1 1919 100 59 7 chr2 76999068 76999357 -173688497 + AluY SINE Alu 1 304 -7 650 226 234 8 chr2 76999863 77000102 -173687752 + L2 LINE L2 3016 3308 -5 2401 68 0 29 chr2 77000335 77000646 -173687208 - AluY SINE Alu -9 302 1 2427 58 0 0 chr2 77000672 77000964 -173686890 - AluY SINE Alu -19 292 1 7452 30 9 0 chr2 77001692 77003332 -173684522 - L1PA3 LINE L1 0 6155 4507 302 285 82 135 chr2 77003967 77004553 -173683301 + L1M2 LINE L1 674 1228 -5621 413 301 100 45 chr2 77004636 77004945 -173682909 + L2 LINE L2 2987 3312 -1 262 278 59 41 chr2 77004991 77005160 -173682694 + MER69A DNA AcHobo 2 173 -4 338 256 200 0 chr2 77005167 77005292 -173682562 + MIR SINE MIR 2 151 -111 443 191 0 92 chr2 77005477 77005608 -173682246 - L2 LINE L2 -1332 1982 1864 614 255 108 89 chr2 77005716 77006132 -173681722 - HAL1 LINE L1 -1314 1193 770 2738 46 0 0 chr2 77007203 77007551 -173680303 - L1PA6 LINE L1 -70 6084 5737 494 61 0 0 chr2 77007552 77007618 -173680236 + L1PA5 LINE L1 6085 6150 -4 1085 195 8 27 chr2 77008164 77008420 -173679434 - L1ME1 LINE L1 -24 6142 5892 1328 197 0 4 chr2 77008613 77008841 -173679013 + AluJb SINE Alu 85 311 -1 252 313 62 23 chr2 77009010 77009186 -173678668 + MER57-int LTR ERV1 1607 1789 -5012 852 105 8 8 chr2 77009798 77009931 -173677923 + L1PB2 LINE L1 6012 6144 -7 25 0 0 0 chr2 77009931 77009956 -173677898 + AT_rich Low_complexity Low_complexity 1 25 0 298 283 17 50 chr2 77010286 77010466 -173677388 + MER57-int LTR ERV1 3305 3478 -4278 280 232 40 40 chr2 77011433 77011532 -173676322 + MER57-int LTR ERV1 3561 3659 -3142 316 287 21 21 chr2 77011664 77011758 -173676096 + MER57-int LTR ERV1 3784 3877 -2924 1613 222 14 67 chr2 77011827 77012184 -173675670 + MER57-int LTR ERV1 5285 5660 -1877 249 33 0 0 chr2 77012184 77012214 -173675640 + (TA)n Simple_repeat Simple_repeat 2 31 0 1940 140 0 3 chr2 77012214 77012499 -173675355 - AluY SINE Alu -27 284 1 1613 222 14 67 chr2 77012499 77012645 -173675209 + MER57-int LTR ERV1 5658 5762 -1775 1013 287 40 42 chr2 77012655 77013524 -173674330 + MER57-int LTR ERV1 2145 6180 -1357 1938 158 7 3 chr2 77013831 77014135 -173673719 - AluSx SINE Alu -7 305 1 889 149 7 20 chr2 77014777 77014957 -173672897 + AluSg/x SINE Alu 140 317 0 345 202 12 12 chr2 77015320 77015404 -173672450 + L1ME4a LINE L1 5832 5915 -206 316 227 13 13 chr2 77015487 77015562 -173672292 + L1ME4a LINE L1 6014 6088 -33 300 278 214 8 chr2 77015787 77015913 -173671941 + MIR3 SINE MIR 23 174 -34 4889 199 91 32 chr2 77016232 77016712 -173671142 - Charlie1a DNA MER1_type -1306 1455 1005 2203 109 20 0 chr2 77016712 77017015 -173670839 - AluSq SINE Alu -4 309 1 4889 199 91 32 chr2 77017015 77017908 -173669946 - Charlie1a DNA MER1_type -1756 1005 1 7080 211 35 18 chr2 77018105 77020484 -173667370 + L1MB7 LINE L1 3491 5917 -267 816 187 45 45 chr2 77020588 77020786 -173667068 - L1ME1 LINE L1 -288 5878 5681 2629 164 12 43 chr2 77020787 77021274 -173666580 + MER70A LTR ERVL 1 472 0 5042 178 48 23 chr2 77021274 77021883 -173665971 + MER70A-int LTR ERVL 1 644 -4379 1423 204 89 0 chr2 77021883 77022163 -173665691 + AluJb SINE Alu 1 305 -7 5042 178 48 23 chr2 77022163 77022516 -173665338 + MER70A-int LTR ERVL 644 987 -4036 * 8282 146 55 1 chr2 77022507 77023853 -173664001 + MER70-int LTR ERVL 2544 3961 -1062 1094 119 40 6 chr2 77023846 77024023 -173663831 + MER70-int LTR ERVL 4753 4935 -88 * 1726 211 71 19 chr2 77024123 77024601 -173663253 + MER67C LTR ERV1 205 707 -3 438 183 0 21 chr2 77025419 77025512 -173662342 + MIR SINE MIR 127 217 -45 829 160 8 0 chr2 77025630 77025761 -173662093 + FLAM_C SINE Alu 2 133 0 30 27 0 0 chr2 77025813 77025850 -173662004 + AT_rich Low_complexity Low_complexity 1 37 0 2361 97 3 0 chr2 77025943 77026251 -173661603 - AluSx SINE Alu -3 309 1 677 106 11 0 chr2 77028869 77028963 -173658891 + AluS SINE Alu 2 96 -217 465 252 9 0 chr2 77029112 77029219 -173658635 + MIR SINE MIR 151 258 -4 1714 144 0 26 chr2 77029291 77029561 -173658293 - AluSx SINE Alu -7 305 43 2156 105 34 7 chr2 77029856 77030152 -173657702 - AluSg SINE Alu -6 304 1 2329 86 7 0 chr2 77030153 77030444 -173657410 - AluSq SINE Alu -19 294 2 399 98 0 16 chr2 77030712 77030773 -173657081 + MER70A-int LTR ERVL 4964 5023 0 1181 166 0 0 chr2 77030780 77030955 -173656899 + MER70A LTR ERVL 1 175 -297 249 33 0 0 chr2 77030955 77030985 -173656869 + (TA)n Simple_repeat Simple_repeat 2 31 0 2274 101 3 3 chr2 77031000 77031306 -173656548 - AluSp SINE Alu -7 306 1 2014 169 82 5 chr2 77031376 77031767 -173656087 - MSTA LTR MaLR -3 425 5 685 133 59 22 chr2 77031767 77031896 -173655958 - MSTA-int LTR MaLR -8 1643 1510 2051 89 4 0 chr2 77031909 77032178 -173655676 + AluY SINE Alu 26 295 -16 184 283 167 8 chr2 77032200 77032320 -173655534 - MIR3 SINE MIR -40 168 30 560 269 144 11 chr2 77033101 77033365 -173654489 - L2 LINE L2 -579 2735 2437 255 224 103 64 chr2 77033484 77033640 -173654214 - L1ME4a LINE L1 -28 6093 5932 343 264 97 7 chr2 77033961 77034105 -173653749 - L1ME4a LINE L1 -353 5768 5612 1196 53 0 0 chr2 77034398 77034548 -173653306 - L1PA5 LINE L1 -1 6153 6004 2437 83 0 10 chr2 77034549 77034850 -173653004 - AluSp SINE Alu -15 298 1 1406 97 5 10 chr2 77035405 77035601 -173652253 + AluSc SINE Alu 102 296 -13 544 279 99 39 chr2 77035877 77036110 -173651744 + L1MC2 LINE L1 5536 5782 -2026 2216 95 0 13 chr2 77037487 77037793 -173650061 - AluSq SINE Alu -11 302 1 2407 215 130 12 chr2 77038415 77039062 -173648792 - MER20B DNA MER1_type -5 778 56 1873 153 14 0 chr2 77039381 77039668 -173648186 + AluJb SINE Alu 1 291 -21 569 109 33 11 chr2 77039673 77039765 -173648089 + L1MC2 LINE L1 6015 6108 -236 189 147 88 118 chr2 77039767 77039835 -173648019 - MIR SINE MIR -54 208 143 485 199 24 34 chr2 77039997 77040225 -173647629 + L1MC3 LINE L1 6098 6327 -1458 2388 70 3 3 chr2 77040225 77040525 -173647329 - AluY SINE Alu -11 300 1 485 199 24 34 chr2 77040525 77040546 -173647308 + L1MC3 LINE L1 6327 7785 0 459 155 0 0 chr2 77040682 77040753 -173647101 + AluJ SINE Alu 38 108 -204 848 113 14 35 chr2 77040773 77040914 -173646940 - AluY SINE Alu 0 311 174 534 167 17 17 chr2 77041133 77041307 -173646547 + CT-rich Low_complexity Low_complexity 2 175 0 339 25 0 0 chr2 77041307 77041347 -173646507 + (CA)n Simple_repeat Simple_repeat 1 40 0 825 228 10 0 chr2 77041664 77041857 -173645997 - L1MB5 LINE L1 -11 6163 5969 437 107 0 0 chr2 77042356 77042412 -173645442 - 5S rRNA rRNA -65 56 1 277 191 11 0 chr2 77042421 77042483 -173645371 - MER5A DNA MER1_type -123 66 4 310 310 28 21 chr2 77042577 77042722 -173645132 - L2 LINE L2 -284 2988 2843 2239 178 57 5 chr2 77042785 77043189 -173644665 + MSTB LTR MaLR 2 426 0 2711 164 11 4 chr2 77043189 77043647 -173644207 + MSTB-int LTR MaLR 1 461 -1190 2034 210 7 25 chr2 77043648 77044090 -173643764 + MER57B LTR ERV1 1 434 0 430 262 186 44 chr2 77044158 77044341 -173643513 + MER57B-int LTR ERV1 86 294 -7243 189 0 0 0 chr2 77044362 77044383 -173643471 + (T)n Simple_repeat Simple_repeat 1 21 0 1361 176 0 5 chr2 77045231 77045453 -173642401 + AluJb SINE Alu 85 305 -7 331 301 62 23 chr2 77045614 77045790 -173642064 + MER66-int LTR ERV1 1607 1789 -5012 874 105 8 8 chr2 77046402 77046535 -173641319 + L1PB2 LINE L1 6012 6144 -7 23 0 0 0 chr2 77046537 77046560 -173641294 + AT_rich Low_complexity Low_complexity 1 23 0 574 311 72 46 chr2 77046804 77047518 -173640336 + MER66-int LTR ERV1 2544 2981 -3820 296 323 16 43 chr2 77047677 77047863 -173639991 + MER66-int LTR ERV1 4091 4271 -3485 285 258 43 32 chr2 77048137 77048230 -173639624 + MER66-int LTR ERV1 3566 3659 -3142 915 278 10 10 chr2 77048814 77049116 -173638738 + AluSx SINE Alu 11 312 0 1971 236 162 32 chr2 77049120 77049562 -173638292 + HAL1 LINE L1 1371 1754 -753 2228 127 0 3 chr2 77049562 77049869 -173637985 + AluSx SINE Alu 7 312 0 1971 236 162 32 chr2 77049869 77049882 -173637972 + HAL1 LINE L1 1754 1764 -743 2068 105 30 117 chr2 77049882 77050309 -173637545 + MLT1B LTR MaLR 1 390 0 1971 236 162 32 chr2 77050309 77050820 -173637034 + HAL1 LINE L1 1764 2464 -43 468 0 0 0 chr2 77050905 77050957 -173636897 + (TA)n Simple_repeat Simple_repeat 1 52 0 2059 112 29 0 chr2 77050958 77051236 -173636618 - AluSx SINE Alu -26 286 1 276 225 85 54 chr2 77052040 77052169 -173635685 + LTR31 LTR ERV1 479 611 -8 329 43 21 0 chr2 77052573 77052620 -173635234 + (TG)n Simple_repeat Simple_repeat 2 49 0 397 302 50 40 chr2 77052716 77052944 -173634910 + MER66-int LTR ERV1 538 1624 -5052 2549 338 63 56 chr2 77053159 77054817 -173633037 + MER66-int LTR ERV1 953 2597 -4525 8189 58 6 8 chr2 77054817 77055825 -173632029 + LTR13 LTR ERVK 2 1007 0 2549 338 63 56 chr2 77055825 77055866 -173631988 + MER66-int LTR ERV1 2597 2636 -4486 2449 55 7 3 chr2 77055866 77056158 -173631696 + AluY SINE Alu 1 293 -18 2549 338 63 56 chr2 77056158 77056857 -173630997 + MER66-int LTR ERV1 2636 3328 -3794 1985 145 30 3 chr2 77056857 77057161 -173630693 + AluSq SINE Alu 1 312 -1 2549 338 63 56 chr2 77057161 77057964 -173629890 + MER66-int LTR ERV1 3328 4180 -2942 629 115 11 0 chr2 77057998 77058085 -173629769 + AluS SINE Alu 2 89 -224 1178 257 119 55 chr2 77058256 77058498 -173629356 + L1MC4a LINE L1 5333 5274 -906 2159 118 7 3 chr2 77058498 77058795 -173629059 - AluJb SINE Alu -14 298 1 1178 257 119 55 chr2 77058795 77059136 -173628718 + L1MC4a LINE L1 5273 5591 -589 192 200 0 0 chr2 77059468 77059508 -173628346 + CT-rich Low_complexity Low_complexity 2 41 0 2188 171 28 0 chr2 77059880 77060272 -173627582 + MER57A LTR ERV1 1 403 0 634 252 19 0 chr2 77060890 77061049 -173626805 + MIR SINE MIR 47 208 -54 252 273 13 0 chr2 77061775 77061852 -173626002 - MLT1K LTR MaLR -6 582 505 1455 188 75 9 chr2 77062434 77062769 -173625085 - MER4D LTR ERV1 0 903 547 318 233 19 39 chr2 77062770 77062873 -173624981 - MER4E LTR ERV1 -609 170 70 * 809 216 153 0 chr2 77062871 77063107 -173624747 - MER49 LTR ERV1 -635 288 17 21 0 0 0 chr2 77064158 77064179 -173623675 + AT_rich Low_complexity Low_complexity 1 21 0 37669 36 5 3 chr2 77064360 77068828 -173619026 + L1P LINE L1 2 4477 -1669 1990 135 7 3 chr2 77069017 77069300 -173618554 + AluSx SINE Alu 1 331 0 391 21 0 0 chr2 77069300 77069347 -173618507 + (TAAA)n Simple_repeat Simple_repeat 2 128 0 638 291 19 28 chr2 77069824 77070098 -173617756 + MER57-int LTR ERV1 6806 7001 -536 2016 216 14 16 chr2 77070242 77070677 -173617177 + MER57B LTR ERV1 1 434 0 6273 179 49 11 chr2 77070677 77071071 -173616783 + MSTB-int LTR MaLR 459 837 -814 2112 144 3 0 chr2 77071071 77071376 -173616478 - AluSx SINE Alu -6 306 1 6273 179 49 11 chr2 77071376 77072130 -173615724 + MSTB-int LTR MaLR 837 1650 -1 2199 181 44 5 chr2 77072131 77072517 -173615337 + MSTB LTR MaLR 1 401 -25 267 252 57 49 chr2 77072620 77072743 -173615111 + MLT1H LTR MaLR 5 128 -421 231 353 0 0 chr2 77072778 77072863 -173614991 + MLT1H LTR MaLR 210 294 -255 362 197 28 0 chr2 77072911 77072982 -173614872 + MLT1H LTR MaLR 413 485 -64 594 235 37 19 chr2 77074134 77074296 -173613558 + MIR SINE MIR 47 211 -51 477 0 0 0 chr2 77076081 77076134 -173611720 + (TG)n Simple_repeat Simple_repeat 1 53 0 193 227 91 11 chr2 77076140 77076228 -173611626 - L2 LINE L2 -620 2694 2600 533 278 41 6 chr2 77076228 77076397 -173611457 + MER91A DNA MER1_type 1 175 -21 239 220 17 0 chr2 77077219 77077278 -173610576 - L2 LINE L2 0 3272 3213 1318 193 73 29 chr2 77078067 77078409 -173609445 - MER4D LTR ERV1 0 903 547 385 241 0 19 chr2 77078410 77078518 -173609336 - MER4E LTR ERV1 -609 170 65 * 524 177 44 9 chr2 77078511 77078624 -173609230 - MER49 LTR ERV1 -634 289 173 1524 114 0 0 chr2 77078627 77078828 -173609026 - AluSg SINE Alu -109 201 1 384 176 66 11 chr2 77079604 77079695 -173608159 + MER67C LTR ERV1 27 122 -588 517 276 154 6 chr2 77079795 77080158 -173607696 - L1 LINE L1 -2634 4214 3798 5993 183 30 17 chr2 77080213 77081040 -173606814 - L1PA16 LINE L1 -9 6157 5342 1923 122 0 87 chr2 77081040 77081375 -173606479 - AluSx SINE Alu -6 306 1 5993 183 30 17 chr2 77081375 77082752 -173605102 - L1PA16 LINE L1 -824 5342 3905 285 297 27 9 chr2 77082826 77082937 -173604917 - L1 LINE L1 -6501 348 236 354 287 98 75 chr2 77083939 77084326 -173603528 - L1ME4a LINE L1 -1 6120 5725 40665 77 5 2 chr2 77084327 77090454 -173597400 - L1PA5 LINE L1 -1 6153 11 1255 276 67 53 chr2 77091000 77091627 -173596227 + L1MC4a LINE L1 5346 5981 -1827 260 349 12 0 chr2 77091935 77092021 -173595833 + CT-rich Low_complexity Low_complexity 1 87 0 203 200 0 0 chr2 77093601 77093636 -173594218 + T-rich Low_complexity Low_complexity 1 35 0 343 253 53 0 chr2 77094210 77094305 -173593549 - MIR SINE MIR -81 181 82 2242 116 0 0 chr2 77095002 77095294 -173592560 + AluSx SINE Alu 1 292 -20 25 0 0 0 chr2 77095295 77095320 -173592534 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 77095422 77095443 -173592411 + AT_rich Low_complexity Low_complexity 1 21 0 802 248 0 0 chr2 77095678 77095835 -173592019 + FRAM SINE Alu 4 160 -16 21 0 0 0 chr2 77095835 77095856 -173591998 + AT_rich Low_complexity Low_complexity 1 21 0 2661 203 122 22 chr2 77096102 77096923 -173590931 + Charlie1 DNA MER1_type 1 2214 -547 963 225 114 36 chr2 77097525 77097785 -173590069 - L1M4 LINE L1 -2502 3644 3406 2305 103 0 6 chr2 77097785 77098097 -173589757 - AluY SINE Alu -1 310 1 963 225 114 36 chr2 77098097 77098311 -173589543 - L1M4 LINE L1 -2740 3406 3133 480 319 1 34 chr2 77098615 77098873 -173588981 - MER66-int LTR ERV1 -5022 1654 1329 291 374 36 22 chr2 77101606 77101745 -173586109 + L2 LINE L2 3125 3265 -7 717 164 0 0 chr2 77101748 77101858 -173585996 + FLAM_C SINE Alu 2 111 -32 186 43 0 0 chr2 77101862 77101885 -173585969 + (T)n Simple_repeat Simple_repeat 1 23 0 418 273 117 45 chr2 77101991 77102255 -173585599 + HAL1 LINE L1 1950 2232 -275 708 252 112 4 chr2 77102448 77102706 -173585148 + L1ME3 LINE L1 5004 5289 -857 1853 155 11 3 chr2 77102773 77103294 -173584560 + THE1B LTR MaLR 1 428 0 432 286 68 41 chr2 77103295 77103515 -173584339 + L1ME3 LINE L1 5322 5547 -617 394 274 104 9 chr2 77103615 77103827 -173584027 + L1ME3 LINE L1 5720 5951 -211 206 128 26 0 chr2 77103873 77103912 -173583942 + (TAGA)n Simple_repeat Simple_repeat 2 41 0 216 0 0 0 chr2 77104645 77104669 -173583185 + (TCC)n Simple_repeat Simple_repeat 1 24 0 377 138 0 0 chr2 77105093 77105151 -173582703 + MER53 DNA DNA 1 58 -131 182 91 30 0 chr2 77105333 77105366 -173582488 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 189 0 0 0 chr2 77106142 77106163 -173581691 + (TCC)n Simple_repeat Simple_repeat 1 21 0 429 169 79 11 chr2 77106587 77106676 -173581178 + MER53 DNA DNA 1 95 -94 1465 185 60 0 chr2 77106959 77107240 -173580614 + L1MB4 LINE L1 5882 6179 -1 360 201 19 19 chr2 77107732 77107886 -173579968 + CT-rich Low_complexity Low_complexity 2 155 0 450 0 0 0 chr2 77107887 77107937 -173579917 + (CA)n Simple_repeat Simple_repeat 2 51 0 374 161 0 0 chr2 77108381 77108437 -173579417 - 5S rRNA rRNA -65 56 1 2333 72 14 0 chr2 77108444 77108737 -173579117 - AluSp SINE Alu -16 297 1 248 207 12 0 chr2 77108751 77108811 -173579043 - MER5A DNA MER1_type -125 64 4 310 310 28 21 chr2 77108904 77109049 -173578805 - L2 LINE L2 -284 2988 2843 2152 174 76 5 chr2 77109112 77109509 -173578345 + MSTB LTR MaLR 2 426 0 2596 167 20 7 chr2 77109509 77109964 -173577890 + MSTB-int LTR MaLR 1 461 -1190 2095 204 9 25 chr2 77109965 77110406 -173577448 + MER57B LTR ERV1 1 434 0 502 260 89 48 chr2 77110410 77110654 -173577200 + MER57B-int LTR ERV1 3 294 -7243 189 0 0 0 chr2 77110675 77110696 -173577158 + (T)n Simple_repeat Simple_repeat 1 21 0 1324 256 91 72 chr2 77112285 77112909 -173574945 + L1MC4a LINE L1 5346 5981 -1827 235 360 12 0 chr2 77113217 77113303 -173574551 + CT-rich Low_complexity Low_complexity 1 87 0 604 269 48 0 chr2 77115499 77115666 -173572188 - MIR SINE MIR -81 181 7 2208 113 0 7 chr2 77116318 77116618 -173571236 + AluSx SINE Alu 1 298 -14 229 250 0 97 chr2 77116629 77116701 -173571153 + L1MC/D LINE L1 5589 5653 -2155 907 287 84 38 chr2 77121383 77122014 -173565840 - MER66-int LTR ERV1 -57 6619 5927 2269 88 0 7 chr2 77122014 77122309 -173565545 - AluY SINE Alu -17 294 2 2382 97 0 0 chr2 77122561 77122861 -173564993 + AluSx SINE Alu 1 300 -12 267 307 10 10 chr2 77123778 77123879 -173563975 - MER66-int LTR ERV1 -2529 6206 6106 753 300 40 38 chr2 77124099 77124573 -173563281 - MER66-int LTR ERV1 -1910 5846 5372 2141 128 21 40 chr2 77124712 77125086 -173562768 + THE1C LTR MaLR 1 367 -8 466 327 0 31 chr2 77126192 77126415 -173561439 - MER66-int LTR ERV1 -5022 1654 1439 318 360 36 22 chr2 77129211 77129350 -173558504 + L2 LINE L2 3125 3265 -7 682 173 0 0 chr2 77129353 77129463 -173558391 + FLAM_C SINE Alu 2 111 -32 409 276 123 38 chr2 77129585 77129846 -173558008 + HAL1 LINE L1 1950 2232 -275 496 267 130 11 chr2 77130036 77130306 -173557548 + L1ME LINE L1 5004 5305 -841 1946 91 4 0 chr2 77130355 77130609 -173557245 + THE1B LTR MaLR 1 255 -109 1545 124 5 0 chr2 77130609 77130818 -173557036 + THE1B LTR MaLR 18 227 -137 436 141 0 0 chr2 77130816 77130880 -173556974 + THE1B LTR MaLR 365 428 0 * 439 290 68 14 chr2 77130881 77131088 -173556766 + L1ME LINE L1 5322 5539 -623 1270 145 0 0 chr2 77131190 77131369 -173556485 + AluSg/x SINE Alu 132 310 -2 271 287 87 17 chr2 77131376 77131491 -173556363 + HERVR LTR ERV1 4257 4379 -3013 2725 311 58 76 chr2 77131886 77132232 -173555622 + HERVR LTR ERV1 4702 5053 -2069 2055 135 10 6 chr2 77132232 77132543 -173555311 + AluJb SINE Alu 1 312 0 2725 311 58 76 chr2 77132543 77134592 -173553262 + HERVR LTR ERV1 5053 7054 -68 993 134 0 0 chr2 77135251 77135385 -173552469 + AluJo SINE Alu 1 134 -178 25 0 0 0 chr2 77135385 77135410 -173552444 + AT_rich Low_complexity Low_complexity 1 25 0 1900 147 3 16 chr2 77135603 77135910 -173551944 + AluJb SINE Alu 1 303 -9 62 36 0 0 chr2 77137024 77137107 -173550747 + AT_rich Low_complexity Low_complexity 1 83 0 312 298 56 31 chr2 77137107 77137268 -173550586 + MIR SINE MIR 66 230 -32 2278 110 3 0 chr2 77137569 77137870 -173549984 + AluSp SINE Alu 1 302 -11 212 274 68 14 chr2 77138163 77138236 -173549618 + L2 LINE L2 3196 3272 0 806 168 0 40 chr2 77138408 77138557 -173549297 - FLAM_C SINE Alu 0 143 1 491 286 0 30 chr2 77138602 77138770 -173549084 - MIR SINE MIR -62 200 38 2251 100 7 3 chr2 77138812 77139113 -173548741 + AluSx SINE Alu 1 302 -10 2789 195 24 29 chr2 77139153 77139671 -173548183 + MLT2B3 LTR ERVL 1 517 -37 510 61 0 0 chr2 77139671 77139737 -173548117 + (TCCA)n Simple_repeat Simple_repeat 2 67 0 2789 195 24 29 chr2 77139737 77139772 -173548082 + MLT2B3 LTR ERVL 517 551 -3 485 293 90 16 chr2 77139913 77140101 -173547753 - L3 LINE CR1 -550 1027 826 2419 88 0 0 chr2 77140155 77140451 -173547403 + AluY SINE Alu 1 296 -15 392 250 30 15 chr2 77141414 77141546 -173546308 + L1ME4a LINE L1 3712 3845 -2301 24 53 0 0 chr2 77141546 77141584 -173546270 + AT_rich Low_complexity Low_complexity 1 38 0 593 330 105 39 chr2 77141753 77142572 -173545282 + L2 LINE L2 2441 3312 -1 229 276 58 39 chr2 77142584 77142740 -173545114 + L1ME4a LINE L1 5573 5731 -390 2492 76 0 0 chr2 77142802 77143106 -173544748 + AluY SINE Alu 1 304 -7 227 195 115 62 chr2 77143160 77143273 -173544581 + L1ME4a LINE L1 5906 6024 -97 638 100 0 11 chr2 77144180 77144315 -173543539 + AluSq SINE Alu 2 175 -138 237 132 0 0 chr2 77144315 77144353 -173543501 + (A)n Simple_repeat Simple_repeat 1 38 0 865 75 0 0 chr2 77144361 77144467 -173543387 + AluSq/x SINE Alu 2 107 -206 1747 148 66 6 chr2 77144971 77145303 -173542551 - L1MB4 LINE L1 -37 6143 5792 2137 123 0 0 chr2 77145728 77146020 -173541834 - AluY SINE Alu -19 292 1 1017 291 45 41 chr2 77146020 77147049 -173540805 + MER57B-int LTR ERV1 2082 6195 -1342 2046 142 7 3 chr2 77147351 77147661 -173540193 - AluSx SINE Alu -1 311 1 2054 148 3 0 chr2 77148375 77148680 -173539174 + AluSx SINE Alu 1 306 -6 605 287 37 33 chr2 77149154 77149432 -173538422 + MER57B-int LTR ERV1 6806 7054 -483 2250 96 10 10 chr2 77149445 77149746 -173538108 + AluY SINE Alu 1 301 -10 441 178 29 23 chr2 77149777 77149885 -173537969 + MER57B-int LTR ERV1 7026 7537 0 2099 211 9 16 chr2 77149885 77150322 -173537532 + MER57B LTR ERV1 1 434 0 6222 183 46 14 chr2 77150324 77150720 -173537134 + MSTB-int LTR MaLR 461 843 -808 1867 166 10 0 chr2 77150720 77151016 -173536838 - AluSx SINE Alu -13 299 1 6222 183 46 14 chr2 77151016 77151772 -173536082 + MSTB-int LTR MaLR 843 1650 -1 2141 188 44 5 chr2 77151775 77152159 -173535695 + MSTB LTR MaLR 3 401 -25 358 231 26 0 chr2 77152547 77152625 -173535229 + MLT1H LTR MaLR 413 492 -57 299 264 13 119 chr2 77152695 77152854 -173535000 + MLT1J2 LTR MaLR 309 450 0 605 255 19 6 chr2 77153755 77153912 -173533942 + MIR SINE MIR 34 192 -70 189 0 0 0 chr2 77155735 77155756 -173532098 + (TG)n Simple_repeat Simple_repeat 1 21 0 199 237 86 11 chr2 77155763 77155856 -173531998 - L2 LINE L2 -615 2699 2600 546 289 17 6 chr2 77155856 77156029 -173531825 + MER91A DNA MER1_type 1 175 -21 229 254 17 0 chr2 77156849 77156908 -173530946 - L2 LINE L2 0 3272 3213 1613 42 55 5 chr2 77157043 77157260 -173530594 - L1P LINE L1 -1683 4463 4236 * 23424 73 6 1 chr2 77157257 77160263 -173527591 - L1P LINE L1 -3114 3032 11 1753 171 50 41 chr2 77160677 77161039 -173526815 + MLT1A1 LTR MaLR 1 365 0 439 330 91 38 chr2 77161454 77161646 -173526208 + L1ME4a LINE L1 5394 5574 -547 1305 213 17 50 chr2 77161646 77161947 -173525907 - AluJo SINE Alu -21 291 1 439 330 91 38 chr2 77161947 77162367 -173525487 + L1ME4a LINE L1 5574 6039 -82 3350 173 18 0 chr2 77162522 77163119 -173524735 - L1MB5 LINE L1 -34 6140 5533 762 267 50 25 chr2 77162830 77163152 -173524702 - L1PA5 LINE L1 -329 5825 5496 * 386 293 72 40 chr2 77163192 77163414 -173524440 - MIR SINE MIR -14 248 20 2025 135 0 0 chr2 77164076 77164358 -173523496 - AluSx SINE Alu -30 282 1 4609 183 19 32 chr2 77164800 77166114 -173521740 - L1MB2 LINE L1 -14 6157 4855 2306 104 0 3 chr2 77166114 77166413 -173521441 + AluSx SINE Alu 1 298 -14 4609 183 19 32 chr2 77166413 77166532 -173521322 - L1MB2 LINE L1 -1316 4855 4736 684 220 0 0 chr2 77166561 77166693 -173521161 - FLAM_C SINE Alu -10 133 2 508 127 0 0 chr2 77166695 77166774 -173521080 - L1MB2 LINE L1 -1400 4746 4668 2017 115 0 0 chr2 77166841 77167111 -173520743 - AluSg SINE Alu -8 302 33 2139 95 24 3 chr2 77167285 77167580 -173520274 + AluY SINE Alu 1 301 -10 2263 95 0 7 chr2 77168352 77168658 -173519196 + AluY SINE Alu 1 304 -7 21 36 0 0 chr2 77168809 77168837 -173519017 + AT_rich Low_complexity Low_complexity 1 28 0 302 391 17 6 chr2 77169375 77169549 -173518305 + MIR3 SINE MIR 16 191 -17 365 106 0 0 chr2 77169756 77169803 -173518051 + Alu SINE Alu 2 48 -252 1273 181 40 40 chr2 77169886 77170162 -173517692 + AluJo SINE Alu 5 280 -32 261 0 0 0 chr2 77170162 77170191 -173517663 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 28 48 0 0 chr2 77170374 77170416 -173517438 + AT_rich Low_complexity Low_complexity 1 42 0 2278 103 3 0 chr2 77170639 77170940 -173516914 + AluSp SINE Alu 1 302 -11 1944 128 0 0 chr2 77170968 77171251 -173516603 + AluSx SINE Alu 1 310 0 223 37 0 0 chr2 77171251 77171278 -173516576 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 1941 135 7 0 chr2 77171719 77172001 -173515853 + AluSq SINE Alu 1 284 -29 2122 96 24 3 chr2 77172183 77172476 -173515378 + AluY SINE Alu 1 299 -12 2240 95 3 10 chr2 77173252 77173557 -173514297 + AluY SINE Alu 1 303 -8 336 374 23 11 chr2 77174225 77174399 -173513455 + MIR3 SINE MIR 16 191 -17 373 85 0 0 chr2 77174606 77174653 -173513201 + Alu SINE Alu 2 48 -253 1423 186 36 33 chr2 77174736 77175037 -173512817 + AluJo SINE Alu 5 306 -6 34 24 0 0 chr2 77175212 77175253 -173512601 + AT_rich Low_complexity Low_complexity 1 41 0 2282 87 14 0 chr2 77175478 77175767 -173512087 + AluSp SINE Alu 1 293 -20 609 114 67 7 chr2 77175767 77176217 -173511637 + (TA)n Simple_repeat Simple_repeat 1 477 0 2244 117 0 0 chr2 77176238 77176538 -173511316 + AluSx SINE Alu 1 300 -12 200 262 33 0 chr2 77180238 77180299 -173507555 + (CAGCC)n Simple_repeat Simple_repeat 5 67 0 2229 99 0 31 chr2 77180887 77181209 -173506645 + AluSx SINE Alu 1 312 0 432 145 14 8 chr2 77182814 77183043 -173504811 + AluSq SINE Alu 1 301 -10 512 206 23 97 chr2 77184165 77184182 -173503672 + L1ME LINE L1 5579 5596 -525 2205 112 0 0 chr2 77184182 77184477 -173503377 - AluSx SINE Alu -13 299 5 512 206 23 97 chr2 77184477 77184675 -173503179 + L1ME LINE L1 5596 5776 -345 354 275 6 16 chr2 77184789 77184971 -173502883 + C-rich Low_complexity Low_complexity 1 180 0 363 226 13 44 chr2 77184985 77185310 -173502544 + CT-rich Low_complexity Low_complexity 1 314 0 2041 181 40 35 chr2 77185524 77185595 -173502259 - L1MB7 LINE L1 0 6184 6115 2178 101 30 0 chr2 77185595 77185893 -173501961 + AluSx SINE Alu 1 307 -5 2041 181 40 35 chr2 77185893 77186274 -173501580 - L1MB7 LINE L1 -69 6115 5730 305 221 55 52 chr2 77186283 77186441 -173501413 - MIR SINE MIR -11 251 39 1948 130 6 46 chr2 77186847 77187022 -173500832 - AluSx SINE Alu -2 310 152 2166 98 24 0 chr2 77187022 77187317 -173500537 - AluSp SINE Alu -11 302 1 1948 130 6 46 chr2 77187317 77187464 -173500390 - AluSx SINE Alu -160 152 1 1172 89 42 26 chr2 77187582 77187773 -173500081 - L1MB4 LINE L1 -1 6179 5986 334 231 8 123 chr2 77188880 77189010 -173498844 + L2 LINE L2 2337 2451 -863 243 176 98 0 chr2 77189010 77189061 -173498793 + MLT1D LTR MaLR 450 505 0 1552 241 103 11 chr2 77189100 77189469 -173498385 - MER119 DNA MER1_type -164 419 17 887 186 6 19 chr2 77189469 77189630 -173498224 - FRAM SINE Alu -7 159 1 632 253 32 48 chr2 77189652 77189838 -173498016 + L2 LINE L2 2626 2808 -506 987 201 0 5 chr2 77189844 77190028 -173497826 - MER58A DNA MER1_type 0 224 42 904 250 104 77 chr2 77190064 77190516 -173497338 + L2 LINE L2 2848 3311 -2 2217 129 3 0 chr2 77191469 77191778 -173496076 - AluSg SINE Alu 0 310 1 880 255 136 30 chr2 77192051 77192618 -173495236 - L2 LINE L2 -7 3306 2683 2212 105 14 7 chr2 77192618 77192912 -173494942 + AluSx SINE Alu 1 296 -16 880 255 136 30 chr2 77192912 77192958 -173494896 - L2 LINE L2 -630 2683 2643 831 172 0 0 chr2 77193091 77193225 -173494629 - FAM SINE Alu 0 49 1 212 0 36 0 chr2 77193229 77193257 -173494597 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 932 164 0 0 chr2 77193261 77193401 -173494453 - FRAM SINE Alu -35 141 2 443 205 0 0 chr2 77194291 77194369 -173493485 + L2 LINE L2 3230 3307 -6 918 146 6 43 chr2 77195190 77195354 -173492500 + FRAM SINE Alu 2 159 -17 21 0 0 0 chr2 77198584 77198605 -173489249 + AT_rich Low_complexity Low_complexity 1 21 0 282 56 0 0 chr2 77198935 77198971 -173488883 + (TA)n Simple_repeat Simple_repeat 2 37 0 2258 95 7 26 chr2 77199023 77199327 -173488527 + AluSx SINE Alu 1 298 -14 1102 184 42 9 chr2 77199478 77199690 -173488164 - MER20 DNA MER1_type 0 219 1 690 257 111 54 chr2 77199797 77200147 -173487707 - MER57B LTR ERV1 0 434 65 1342 308 86 37 chr2 77200566 77200715 -173487139 - L2 LINE L2 -4 3309 3169 2638 160 16 9 chr2 77200715 77200779 -173487075 - Tigger2a DNA MER2_type -2274 434 372 2345 110 3 0 chr2 77200779 77201087 -173486767 + AluSx SINE Alu 1 309 -3 369 0 0 0 chr2 77201087 77201128 -173486726 + (TA)n Simple_repeat Simple_repeat 1 41 0 2638 160 16 9 chr2 77201128 77201493 -173486361 - Tigger2a DNA MER2_type -2335 373 1 1342 308 86 37 chr2 77201493 77201909 -173485945 - L2 LINE L2 -144 3169 2775 738 106 0 98 chr2 77201909 77201932 -173485922 - FLAM_C SINE Alu -179 123 99 1995 96 71 0 chr2 77201932 77202212 -173485642 + AluSx SINE Alu 1 300 -12 738 106 0 98 chr2 77202212 77202320 -173485534 - FLAM_C SINE Alu -203 99 5 1342 308 86 37 chr2 77202320 77202817 -173485037 - L2 LINE L2 -538 2775 2185 2030 159 42 83 chr2 77203808 77204144 -173483710 + Charlie4a DNA MER1_type 2 310 -1651 2661 52 0 0 chr2 77204144 77204452 -173483402 + AluY SINE Alu 1 308 -3 2030 159 42 83 chr2 77204452 77204644 -173483210 + Charlie4a DNA MER1_type 310 508 0 603 266 141 30 chr2 77204662 77204996 -173482858 - L2 LINE L2 -1153 2161 1791 1036 197 43 14 chr2 77205004 77205212 -173482642 - MER58A DNA MER1_type -8 216 3 441 280 58 25 chr2 77205213 77205456 -173482398 - L2 LINE L2 -1516 1798 1548 622 241 188 44 chr2 77206732 77207073 -173480781 + L2 LINE L2 2921 3310 -3 246 216 11 54 chr2 77207272 77207457 -173480397 + (GTGTG)n Simple_repeat Simple_repeat 4 180 0 * 280 147 45 57 chr2 77207355 77207542 -173480312 + (TTGTG)n Simple_repeat Simple_repeat 1 184 0 501 208 54 152 chr2 77207697 77207885 -173479969 - L1ME LINE L1 -352 5769 5564 2252 110 0 7 chr2 77207885 77208195 -173479659 + AluSx SINE Alu 5 312 0 501 208 54 152 chr2 77208195 77208545 -173479309 - L1ME LINE L1 -557 5564 5300 734 204 39 74 chr2 77208829 77208940 -173478914 - MIR SINE MIR -28 234 134 1094 107 124 0 chr2 77208940 77209109 -173478745 - MER30B DNA MER1_type 0 190 1 734 204 39 74 chr2 77209109 77209228 -173478626 - MIR SINE MIR -128 134 12 246 280 54 21 chr2 77209422 77209515 -173478339 - L1MC4a LINE L1 -1660 6148 6053 3489 143 47 5 chr2 77209582 77210163 -173477691 + MER6A DNA MER2_type 1 605 0 348 300 17 25 chr2 77210196 77210316 -173477538 - L2 LINE L2 -5 3267 3149 1225 145 0 35 chr2 77210598 77210798 -173477056 - AluJo SINE Alu 0 312 120 276 130 0 0 chr2 77210808 77210854 -173477000 + (TA)n Simple_repeat Simple_repeat 1 46 0 884 127 0 0 chr2 77210870 77210988 -173476866 - AluJo SINE Alu -194 118 1 335 297 89 0 chr2 77211393 77211494 -173476360 + MIR SINE MIR 3 112 -150 2276 101 10 0 chr2 77213053 77213350 -173474504 - AluSx SINE Alu -12 300 1 1812 122 19 81 chr2 77213738 77214058 -173473796 + AluJb SINE Alu 1 300 -12 2168 141 0 0 chr2 77214218 77214517 -173473337 + AluJb SINE Alu 1 299 -13 1092 142 35 6 chr2 77215930 77216099 -173471755 - MSTD LTR MaLR 0 396 223 649 164 9 0 chr2 77216103 77216213 -173471641 - MSTD LTR MaLR -285 111 1 1405 41 0 6 chr2 77216320 77216492 -173471362 - L1MA1 LINE L1 0 6302 6132 201 275 12 12 chr2 77217582 77217662 -173470192 - MER5B DNA MER1_type -98 80 1 31 44 0 0 chr2 77218117 77218162 -173469692 + AT_rich Low_complexity Low_complexity 1 45 0 2459 93 0 0 chr2 77219056 77219358 -173468496 - AluSq SINE Alu -11 302 1 229 350 144 23 chr2 77219431 77219951 -173467903 - L2 LINE L2 -546 2768 2186 1214 99 16 136 chr2 77220096 77220339 -173467515 - AluSg/x SINE Alu -10 302 89 306 0 0 0 chr2 77220339 77220373 -173467481 + (TG)n Simple_repeat Simple_repeat 1 34 0 650 78 223 0 chr2 77220373 77220476 -173467378 - AluSg SINE Alu -183 127 2 217 307 34 0 chr2 77220781 77220869 -173466985 - L2 LINE L2 -1523 1791 1701 537 224 70 108 chr2 77220903 77220962 -173466892 - L1ME3A LINE L1 -9 6161 6101 2227 112 0 0 chr2 77220962 77221256 -173466598 + AluSg SINE Alu 1 294 -16 537 224 70 108 chr2 77221256 77221540 -173466314 - L1ME3A LINE L1 -69 6101 5831 1073 185 12 0 chr2 77221987 77222160 -173465694 - FAM SINE Alu 0 175 1 1895 137 3 36 chr2 77222226 77222533 -173465321 + AluJb SINE Alu 1 297 -15 213 342 0 45 chr2 77222861 77222972 -173464882 - L2 LINE L2 -1504 1810 1705 244 289 148 8 chr2 77223280 77223408 -173464446 + MER5B DNA MER1_type 3 148 -30 2128 96 0 68 chr2 77225506 77225828 -173462026 - AluY SINE Alu -11 300 1 911 147 0 7 chr2 77225828 77225964 -173461890 - AluSq/x SINE Alu -178 135 1 1185 110 119 23 chr2 77225976 77226195 -173461659 - L1MA8 LINE L1 0 6291 6052 1800 146 37 12 chr2 77226405 77226733 -173461121 - MER44D DNA MER2_type -1 608 3 240 161 0 0 chr2 77227207 77227269 -173460585 + A-rich Low_complexity Low_complexity 1 62 0 633 273 99 5 chr2 77227832 77228026 -173459828 + MIR SINE MIR 34 241 -21 542 334 140 3 chr2 77228316 77228624 -173459230 + L3 LINE CR1 1128 1477 -100 22 0 0 0 chr2 77228782 77228804 -173459050 + AT_rich Low_complexity Low_complexity 1 22 0 1520 132 4 40 chr2 77229035 77229286 -173458568 - AluSc SINE Alu -3 306 65 2146 128 3 0 chr2 77229418 77229716 -173458138 + AluSx SINE Alu 1 299 -13 299 206 41 21 chr2 77230088 77230185 -173457669 - L1MC4 LINE L1 -40 8002 7785 209 391 19 14 chr2 77231314 77231529 -173456325 + L2 LINE L2 2543 2758 -556 509 251 22 56 chr2 77231575 77231754 -173456100 + MER5B DNA MER1_type 6 178 0 194 174 116 72 chr2 77233155 77233224 -173454630 + MIR SINE MIR 95 166 -96 267 253 169 12 chr2 77234489 77234655 -173453199 + L2 LINE L2 3040 3231 -82 2191 97 28 0 chr2 77234830 77235119 -173452735 + AluSp SINE Alu 1 297 -16 267 294 61 14 chr2 77235190 77235404 -173452450 + L1M4 LINE L1 2926 3149 -2997 2429 84 3 0 chr2 77235405 77235703 -173452151 + AluSp SINE Alu 1 299 -14 185 261 29 14 chr2 77235896 77235965 -173451889 - MIR SINE MIR -106 102 33 540 299 110 59 chr2 77235987 77236164 -173451690 + L1M4 LINE L1 3805 3972 -2174 1762 159 34 10 chr2 77236164 77236460 -173451394 + AluJb SINE Alu 1 303 -9 540 299 110 59 chr2 77236460 77237164 -173450690 + L1M4 LINE L1 3972 4731 -1415 975 40 8 0 chr2 77237174 77237298 -173450556 + L1PA4 LINE L1 6028 6152 -3 26 0 0 0 chr2 77237299 77237325 -173450529 + AT_rich Low_complexity Low_complexity 1 26 0 443 233 44 39 chr2 77237503 77237683 -173450171 + L1ME4a LINE L1 5940 6120 -1 781 154 0 8 chr2 77238502 77238625 -173449229 - FLAM_C SINE Alu -16 127 6 948 296 130 41 chr2 77238924 77239147 -173448707 - MLT1K LTR MaLR -61 527 325 2208 108 0 17 chr2 77239147 77239443 -173448411 - AluSx SINE Alu -21 291 1 948 296 130 41 chr2 77239443 77239702 -173448152 - MLT1K LTR MaLR -263 325 2 242 306 122 0 chr2 77239813 77239911 -173447943 - L2 LINE L2 -2 3270 3161 1870 158 3 7 chr2 77241095 77241387 -173446467 - AluJo SINE Alu -21 291 1 180 0 0 0 chr2 77241390 77241410 -173446444 + (T)n Simple_repeat Simple_repeat 1 20 0 2412 78 3 0 chr2 77242306 77242602 -173445252 + AluSg SINE Alu 1 297 -13 284 308 113 16 chr2 77242932 77243074 -173444780 + MIR SINE MIR 18 183 -79 2165 116 7 7 chr2 77243074 77243375 -173444479 + AluSx SINE Alu 1 301 -11 284 308 113 16 chr2 77243375 77243417 -173444437 + MIR SINE MIR 183 220 -42 1953 156 0 3 chr2 77243541 77243842 -173444012 + AluJb SINE Alu 1 300 -12 961 158 107 0 chr2 77244159 77244336 -173443518 - Tigger1 DNA MER2_type -10 2408 2213 6051 70 13 0 chr2 77245200 77245980 -173441874 - L1PA8 LINE L1 0 6172 5383 2110 118 4 0 chr2 77246233 77246537 -173441317 + AluSx SINE Alu 1 305 0 196 42 0 0 chr2 77246513 77246598 -173441256 + (CAA)n Simple_repeat Simple_repeat 1 85 0 732 221 93 121 chr2 77246657 77247119 -173440735 - L1M4 LINE L1 -3526 2620 2172 * 6035 118 5 73 chr2 77247112 77248162 -173439692 - L1PA13 LINE L1 -2 6161 5041 2172 112 0 0 chr2 77248162 77248448 -173439406 + AluSq SINE Alu 24 309 -4 6035 118 5 73 chr2 77248448 77248709 -173439145 - L1PA13 LINE L1 -1122 5041 4939 268 128 0 0 chr2 77248709 77248748 -173439106 + MLT2C1 LTR ERVL 28 66 -331 6035 118 5 73 chr2 77248748 77248897 -173438957 - L1PA13 LINE L1 -1224 4939 4781 264 130 0 0 chr2 77248898 77248944 -173438910 + (TA)n Simple_repeat Simple_repeat 1 46 0 1903 192 54 6 chr2 77248953 77249302 -173438552 - MLT2D LTR ERVL -48 366 1 1761 142 17 40 chr2 77249729 77250031 -173437823 + AluJb SINE Alu 1 295 -17 2451 87 0 0 chr2 77250481 77250780 -173437074 - AluSq SINE Alu -14 299 1 1018 228 54 51 chr2 77250859 77251193 -173436661 + L1MA9 LINE L1 5945 6279 -33 230 200 0 50 chr2 77251205 77251265 -173436589 + L1ME3 LINE L1 6106 6162 0 351 203 0 0 chr2 77251336 77251405 -173436449 - LTR30 LTR ERV1 -102 620 552 481 266 114 52 chr2 77251508 77251911 -173435943 + L1MC/D LINE L1 5293 5720 -2088 585 187 28 99 chr2 77252077 77252259 -173435595 - L2 LINE L2 -6 3307 3139 2059 157 0 0 chr2 77252285 77252597 -173435257 - AluJo SINE Alu 0 312 1 4788 142 27 20 chr2 77252907 77253099 -173434755 + L1MC1 LINE L1 5504 5693 -640 2166 117 3 0 chr2 77253099 77253389 -173434465 - AluSx SINE Alu -21 291 1 4788 142 27 20 chr2 77253389 77254012 -173433842 + L1MC1 LINE L1 5693 6325 -8 2299 112 0 0 chr2 77254012 77254306 -173433548 + AluSc SINE Alu 1 294 -15 3194 168 33 56 chr2 77254355 77254752 -173433102 + L1MB2 LINE L1 5453 5858 -313 1571 155 7 57 chr2 77254752 77255049 -173432805 + AluJo SINE Alu 13 294 -18 3194 168 33 56 chr2 77255049 77255308 -173432546 + L1MB2 LINE L1 5858 6094 -77 2256 98 0 0 chr2 77255308 77255622 -173432232 + AluSq SINE Alu 2 315 0 3194 168 33 56 chr2 77255622 77255696 -173432158 + L1MB2 LINE L1 6094 6168 -3 301 251 34 74 chr2 77255813 77255988 -173431866 + L1MC4a LINE L1 5191 5358 -788 2246 117 0 10 chr2 77256015 77256324 -173431530 + AluSx SINE Alu 1 306 -6 1800 134 24 31 chr2 77256386 77256677 -173431177 + AluJb SINE Alu 1 289 -23 905 278 92 67 chr2 77257036 77257634 -173430220 + L1MC4a LINE L1 5508 6120 -1 488 216 43 50 chr2 77258579 77258718 -173429136 - MER5A DNA MER1_type -51 138 1 249 342 62 27 chr2 77258738 77259141 -173428713 - L2 LINE L2 -671 2643 2227 569 174 0 0 chr2 77259226 77259312 -173428542 + AluJ/FLAM SINE Alu 1 86 -226 2035 105 62 0 chr2 77259357 77259633 -173428221 + AluSg SINE Alu 3 295 -15 277 284 83 28 chr2 77261024 77261133 -173426721 - MIR3 SINE MIR -10 198 84 380 193 88 44 chr2 77261333 77261447 -173426407 + MIR SINE MIR 96 214 -48 756 141 86 18 chr2 77261474 77261637 -173426217 - MER5A DNA MER1_type -5 184 11 381 268 178 43 chr2 77261859 77262090 -173425764 - L2 LINE L2 -5 3267 3006 211 277 154 46 chr2 77262223 77262353 -173425501 - L2 LINE L2 -523 2791 2648 1358 182 35 0 chr2 77263198 77263422 -173424432 - MER58B DNA MER1_type -2109 311 75 1407 157 31 72 chr2 77263422 77263741 -173424113 + AluJo SINE Alu 1 306 -6 1358 182 35 0 chr2 77263741 77263774 -173424080 - MER58B DNA MER1_type -2345 75 45 247 258 48 0 chr2 77263831 77263893 -173423961 - MIR SINE MIR -90 172 108 191 222 63 95 chr2 77264983 77265009 -173422845 - L2 LINE L2 -6 3307 3282 1017 211 87 62 chr2 77265009 77265365 -173422489 - MLT1A1 LTR MaLR 0 365 1 191 222 63 95 chr2 77265365 77265401 -173422453 - L2 LINE L2 -31 3282 3247 329 237 43 0 chr2 77265928 77266021 -173421833 - L1ME LINE L1 -531 5590 5494 2524 65 3 0 chr2 77266161 77266470 -173421384 - AluY SINE Alu -1 310 1 1509 162 36 69 chr2 77266472 77266806 -173421048 - Charlie4a DNA MER1_type -184 324 2 1351 309 71 38 chr2 77267789 77268286 -173419568 + L2 LINE L2 2185 2720 -593 738 106 0 98 chr2 77268286 77268394 -173419460 + AluJo/FLAM SINE Alu 5 99 -203 1995 96 71 0 chr2 77268394 77268674 -173419180 - AluSx SINE Alu -12 300 1 738 106 0 98 chr2 77268674 77268697 -173419157 + AluJo/FLAM SINE Alu 99 123 -179 1351 309 71 38 chr2 77268697 77269052 -173418802 + L2 LINE L2 2720 3062 -251 2389 140 11 3 chr2 77269113 77269477 -173418377 + Tigger2a DNA MER2_type 1 367 -67 235 241 36 48 chr2 77269477 77269560 -173418294 + L1MD3 LINE L1 6612 6693 -1302 1084 54 15 0 chr2 77269739 77269869 -173417985 - AluY SINE Alu -179 132 1 545 277 47 83 chr2 77269875 77269942 -173417912 - L3 LINE CR1 -716 861 793 1547 168 35 25 chr2 77269942 77270227 -173417627 + AluJb SINE Alu 1 288 -24 545 277 47 83 chr2 77270227 77270459 -173417395 - L3 LINE CR1 -784 793 573 256 156 0 31 chr2 77271127 77271191 -173416663 + GA-rich Low_complexity Low_complexity 2 63 0 21 0 0 0 chr2 77271485 77271506 -173416348 + AT_rich Low_complexity Low_complexity 1 21 0 1352 143 12 62 chr2 77271599 77271858 -173415996 - MLT1B LTR MaLR -134 256 11 615 39 0 0 chr2 77272291 77272369 -173415485 + (TG)n Simple_repeat Simple_repeat 1 78 0 402 39 0 0 chr2 77272776 77272828 -173415026 + (TG)n Simple_repeat Simple_repeat 2 53 0 535 321 29 29 chr2 77273327 77273573 -173414281 + L2 LINE L2 2513 2758 -556 274 264 93 54 chr2 77274238 77274367 -173413487 + MIR SINE MIR 117 250 -12 2454 97 0 0 chr2 77274417 77274727 -173413127 + AluSg SINE Alu 1 310 0 1758 154 49 14 chr2 77274746 77275032 -173412822 + AluJb SINE Alu 15 310 -2 1694 134 61 15 chr2 77275145 77275407 -173412447 + AluSg SINE Alu 1 274 -36 36 82 0 0 chr2 77275407 77275492 -173412362 + AT_rich Low_complexity Low_complexity 1 85 0 351 0 0 0 chr2 77275495 77275534 -173412320 + (TG)n Simple_repeat Simple_repeat 2 40 0 342 0 0 0 chr2 77275533 77275571 -173412283 + (TA)n Simple_repeat Simple_repeat 1 38 0 * 695 304 113 53 chr2 77276261 77276908 -173410946 + L1ME4a LINE L1 5358 6043 -78 2255 63 11 3 chr2 77276925 77277246 -173410608 + AluY SINE Alu 1 323 0 1618 194 11 0 chr2 77277248 77277531 -173410323 - AluJo SINE Alu -26 286 1 188 286 0 0 chr2 77277613 77277662 -173410192 - MER5B DNA MER1_type -51 127 79 191 259 107 36 chr2 77277956 77278068 -173409786 + L2 LINE L2 3134 3253 -19 1428 128 5 5 chr2 77278239 77278450 -173409404 - AluJo SINE Alu -15 297 87 997 174 153 0 chr2 77278453 77278643 -173409211 + MER20 DNA MER1_type 1 219 0 598 273 63 44 chr2 77278802 77279205 -173408649 - LTR33 LTR ERVL -80 441 1 210 283 17 92 chr2 77279624 77279744 -173408110 - L2 LINE L2 -11 3261 3151 3103 150 8 54 chr2 77280220 77280686 -173407168 - Tigger3b DNA MER2_type -1797 1232 797 2261 101 0 0 chr2 77280686 77280974 -173406880 + AluSx SINE Alu 1 288 -24 3103 150 8 54 chr2 77280974 77281095 -173406759 - Tigger3b DNA MER2_type -2232 797 672 1322 126 7 100 chr2 77281238 77281388 -173406466 - Tigger3b DNA MER2_type -2113 915 799 2109 98 11 3 chr2 77281388 77281674 -173406180 + AluSx SINE Alu 1 288 -24 1322 126 7 100 chr2 77281674 77281793 -173406061 - Tigger3b DNA MER2_type -2229 799 671 983 81 0 29 chr2 77281809 77281945 -173405909 - AluSc SINE Alu -4 305 174 1404 109 0 10 chr2 77281950 77282142 -173405712 - AluSg/x SINE Alu -10 302 113 702 121 10 0 chr2 77282216 77282315 -173405539 - AluS SINE Alu -212 101 2 3693 106 33 44 chr2 77282315 77282665 -173405189 - Tigger3b DNA MER2_type -2393 635 294 1825 126 51 10 chr2 77282665 77282958 -173404896 + AluJb SINE Alu 1 305 -7 3693 106 33 44 chr2 77282958 77283248 -173404606 - Tigger3b DNA MER2_type -2734 294 2 411 285 62 8 chr2 77283384 77283514 -173404340 - L2 LINE L2 0 3272 3136 2104 132 7 0 chr2 77283607 77283910 -173403944 - AluSq SINE Alu -8 305 1 377 238 41 33 chr2 77283916 77284038 -173403816 - L1ME4a LINE L1 -286 5835 5713 464 298 91 10 chr2 77284077 77284285 -173403569 - L1ME4a LINE L1 -1823 4323 4099 2320 110 0 3 chr2 77284339 77284648 -173403206 + AluSq SINE Alu 1 308 -5 2365 111 3 0 chr2 77285735 77286042 -173401812 + AluSx SINE Alu 1 308 -4 2140 139 0 0 chr2 77286694 77286995 -173400859 + AluJb SINE Alu 1 301 -11 1738 184 46 23 chr2 77287106 77287479 -173400375 + L1MB7 LINE L1 5753 6131 -53 2201 109 7 0 chr2 77287553 77287846 -173400008 + AluSc SINE Alu 1 295 -14 664 246 0 0 chr2 77288482 77288608 -173399246 + FRAM SINE Alu 1 122 -54 225 0 0 0 chr2 77288644 77288669 -173399185 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 196 333 0 0 chr2 77289571 77289634 -173398220 - L2 LINE L2 -338 2975 2913 185 315 39 55 chr2 77289758 77289885 -173397969 + L3 LINE CR1 1359 1483 -94 251 287 35 11 chr2 77290335 77290422 -173397432 - MLT1I LTR MaLR 0 549 461 266 251 144 59 chr2 77290509 77290696 -173397158 - MLT1I LTR MaLR -128 281 79 629 261 104 0 chr2 77291144 77291355 -173396499 - MIR SINE MIR -29 233 1 2433 83 7 0 chr2 77291613 77291913 -173395941 - AluSx SINE Alu -10 302 1 330 115 0 0 chr2 77291974 77292026 -173395828 + (TCC)n Simple_repeat Simple_repeat 1 52 0 434 170 170 9 chr2 77292266 77292378 -173395476 - MIR SINE MIR 0 262 133 415 235 10 117 chr2 77292677 77292873 -173394981 - LTR16A1 LTR ERVL -18 439 265 434 236 66 0 chr2 77293337 77293443 -173394411 + FLAM_A SINE Alu 1 113 -29 602 213 26 32 chr2 77293652 77293807 -173394047 - MLT2E LTR ERVL 0 628 475 741 252 47 23 chr2 77293813 77294027 -173393827 - MLT2E LTR ERVL -409 219 1 291 300 0 0 chr2 77294210 77294290 -173393564 + L2 LINE L2 3234 3313 0 246 244 0 39 chr2 77294568 77294646 -173393208 + MLT1K LTR MaLR 189 263 -325 1893 130 33 4 chr2 77294819 77295095 -173392759 + AluSx SINE Alu 1 284 -28 585 0 0 0 chr2 77295098 77295163 -173392691 + (GAAAA)n Simple_repeat Simple_repeat 4 68 0 2670 225 123 14 chr2 77295198 77295989 -173391865 + L1ME3A LINE L1 5259 6135 -35 2377 62 7 23 chr2 77296042 77296350 -173391504 - AluY SINE Alu -8 303 1 25 0 0 0 chr2 77296358 77296383 -173391471 + AT_rich Low_complexity Low_complexity 1 25 0 2142 110 56 0 chr2 77296390 77296919 -173390935 - MER51A LTR ERV1 0 634 2 274 23 47 0 chr2 77297080 77297123 -173390731 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 588 112 151 95 chr2 77298838 77299017 -173388837 + MER53 DNA DNA 1 189 0 684 214 157 48 chr2 77299030 77299361 -173388493 + MER113 DNA MER1_type? 7 373 -148 3186 251 151 34 chr2 77299361 77299582 -173388272 - L2 LINE L2 -2 3311 3117 2372 99 0 0 chr2 77299582 77299884 -173387970 - AluSq SINE Alu -11 302 1 3186 251 151 34 chr2 77299884 77300593 -173387261 - L2 LINE L2 -196 3117 2492 1534 181 11 4 chr2 77300593 77300853 -173387001 - AluJb SINE Alu -37 275 14 3186 251 151 34 chr2 77300853 77301838 -173386016 - L2 LINE L2 -821 2492 1175 2377 99 0 3 chr2 77302235 77302547 -173385307 - AluY SINE Alu 0 311 1 244 275 14 0 chr2 77302613 77302682 -173385172 - L2 LINE L2 -270 3002 2933 182 80 0 0 chr2 77302718 77302743 -173385111 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 2480 80 0 3 chr2 77303223 77303535 -173384319 - AluY SINE Alu 0 311 1 222 265 29 0 chr2 77303601 77303669 -173384185 - L2 LINE L2 -270 3002 2933 1123 134 0 13 chr2 77303696 77303881 -173383973 - AluSg/x SINE Alu 0 312 134 233 218 13 77 chr2 77304104 77304182 -173383672 + L2 LINE L2 3193 3265 -48 188 283 0 0 chr2 77306250 77306303 -173381551 + L2 LINE L2 3261 3313 0 2280 110 0 7 chr2 77306910 77307219 -173380635 + AluSx SINE Alu 1 307 -5 2134 123 7 10 chr2 77307231 77307539 -173380315 + AluSx SINE Alu 1 307 -5 750 172 0 8 chr2 77307569 77307697 -173380157 + AluSg/x SINE Alu 165 291 -19 386 273 55 44 chr2 77309312 77309495 -173378359 - L2 LINE L2 -189 3083 2899 209 258 0 30 chr2 77309535 77309601 -173378253 - L2 LINE L2 -475 2839 2776 329 293 14 36 chr2 77309640 77309780 -173378074 + L2 LINE L2 2745 2881 -433 256 290 52 36 chr2 77310027 77310220 -173377634 - L2 LINE L2 -887 2427 2232 660 290 117 75 chr2 77310248 77310947 -173376907 + L2 LINE L2 2515 3270 -2 258 163 20 0 chr2 77311905 77311954 -173375900 - MIR SINE MIR -4 258 209 492 310 110 66 chr2 77312160 77312352 -173375502 - L3 LINE CR1 -158 1419 1237 1979 146 17 0 chr2 77312352 77312646 -173375208 - AluSx SINE Alu -13 299 1 492 310 110 66 chr2 77312646 77312908 -173374946 - L3 LINE CR1 -340 1237 945 2135 154 33 0 chr2 77313052 77313389 -173374465 + MER7A DNA MER2_type 1 346 0 1721 188 155 9 chr2 77313389 77313860 -173373994 + MLT1F LTR MaLR 16 539 -3 350 254 52 22 chr2 77314034 77314168 -173373686 - L1ME4a LINE L1 -296 5825 5688 2216 118 0 3 chr2 77314349 77314653 -173373201 - AluSx SINE Alu -9 303 1 428 301 136 16 chr2 77314904 77315538 -173372316 - L1ME4a LINE L1 -1722 4424 3715 1490 201 3 37 chr2 77315602 77315901 -173371953 - AluJo SINE Alu -23 289 1 2225 119 10 0 chr2 77316091 77316386 -173371468 - AluSq SINE Alu -15 298 1 479 143 39 0 chr2 77316413 77316490 -173371364 - AluJo SINE Alu -14 298 219 287 59 0 0 chr2 77316490 77316524 -173371330 + U2 snRNA snRNA 1 34 -154 1410 183 0 8 chr2 77316524 77316759 -173371095 - AluJo SINE Alu -79 233 1 519 253 47 27 chr2 77317865 77318015 -173369839 + MIR SINE MIR 48 200 -62 1873 68 71 107 chr2 77318204 77318513 -173369341 + AluSg SINE Alu 1 298 -12 298 303 20 0 chr2 77320936 77321035 -173366819 - L2 LINE L2 -1 3271 3171 2234 113 0 0 chr2 77321400 77321693 -173366161 - AluSx SINE Alu -19 293 1 189 229 76 93 chr2 77323629 77323747 -173364107 + MIR SINE MIR 91 206 -56 625 343 78 38 chr2 77324692 77325167 -173362687 + L2 LINE L2 2806 3299 -14 230 206 143 0 chr2 77325340 77325403 -173362451 + MER94 DNA DNA 11 82 -52 23 0 0 0 chr2 77325921 77325944 -173361910 + AT_rich Low_complexity Low_complexity 1 23 0 186 216 0 78 chr2 77326347 77326398 -173361456 + L2 LINE L2 3262 3308 -5 1706 59 0 0 chr2 77326684 77326888 -173360966 + AluY SINE Alu 106 309 -2 647 169 109 16 chr2 77326895 77327079 -173360775 + Charlie4 DNA MER1_type 1761 1961 0 724 266 141 30 chr2 77327097 77327431 -173360423 - L2 LINE L2 -1153 2161 1791 597 246 50 15 chr2 77327439 77327638 -173360216 - MER58A DNA MER1_type -8 216 11 262 261 126 8 chr2 77327920 77328039 -173359815 - L1MD3 LINE L1 -121 7874 7742 1823 115 43 7 chr2 77328071 77328350 -173359504 - AluSp SINE Alu -24 289 1 1830 130 34 65 chr2 77328395 77328717 -173359137 + AluSx SINE Alu 1 312 0 682 285 75 14 chr2 77329114 77329328 -173358526 + MIR SINE MIR 21 247 -15 44 96 0 0 chr2 77329632 77329767 -173358087 + GC_rich Low_complexity Low_complexity 1 135 0 304 204 0 0 chr2 77331108 77331157 -173356697 - AluJ/monomer SINE Alu -255 53 5 2148 116 7 0 chr2 77331236 77331529 -173356325 + AluSx SINE Alu 1 295 -17 1379 175 15 8 chr2 77332319 77332583 -173355271 - MLT1D LTR MaLR 0 505 251 681 205 8 0 chr2 77332712 77332834 -173355020 + AluJb SINE Alu 179 301 -11 836 131 0 0 chr2 77332860 77332982 -173354872 + FLAM_C SINE Alu 1 122 -11 303 256 81 0 chr2 77333824 77333910 -173353944 + L1MC/D LINE L1 5528 5620 -2188 2364 83 0 3 chr2 77334065 77334354 -173353500 + AluSc SINE Alu 1 288 -21 474 200 11 11 chr2 77334576 77334666 -173353188 - MER5B DNA MER1_type -17 161 72 1033 79 0 0 chr2 77334699 77334826 -173353028 + AluSp/q SINE Alu 179 305 -8 2393 103 0 0 chr2 77335298 77335610 -173352244 - AluSx SINE Alu 0 312 1 247 131 49 49 chr2 77335611 77335672 -173352182 - FLAM_A SINE Alu -3 130 70 534 232 93 26 chr2 77336051 77336202 -173351652 - MER5B DNA MER1_type -17 161 1 546 237 170 0 chr2 77336322 77336457 -173351397 + MER5A DNA MER1_type 26 183 -6 367 278 9 9 chr2 77337893 77338001 -173349853 + MIR SINE MIR 3 110 -152 560 215 99 8 chr2 77338052 77338173 -173349681 - MIR SINE MIR -65 197 66 193 283 190 15 chr2 77338385 77338590 -173349264 - L2 LINE L2 -1034 2280 2040 1215 179 127 0 chr2 77339677 77339906 -173347948 - AluJo SINE Alu -54 258 1 506 228 191 19 chr2 77339996 77340158 -173347696 - MIR SINE MIR -9 253 64 183 42 0 0 chr2 77341003 77341027 -173346827 + (A)n Simple_repeat Simple_repeat 1 24 0 229 308 47 70 chr2 77342222 77342394 -173345460 - MIR3 SINE MIR -25 183 16 287 282 39 13 chr2 77342672 77342750 -173345104 - L2 LINE L2 0 3313 3234 254 237 9 31 chr2 77343336 77343467 -173344387 - MIR SINE MIR -28 234 50 185 383 21 0 chr2 77344617 77344711 -173343143 - MIR3 SINE MIR 0 208 113 228 237 52 62 chr2 77345213 77345310 -173342544 + MIR3 SINE MIR 86 181 -27 1696 202 3 3 chr2 77345769 77346061 -173341793 + AluJo SINE Alu 6 297 -15 1229 223 105 31 chr2 77346739 77347130 -173340724 - MSTB2 LTR MaLR -23 434 15 186 43 0 0 chr2 77347134 77347157 -173340697 + (ATG)n Simple_repeat Simple_repeat 2 24 0 * 258 105 0 0 chr2 77347156 77347194 -173340660 + (TCG)n Simple_repeat Simple_repeat 2 39 0 2211 44 33 11 chr2 77347593 77347865 -173339989 - AluY SINE Alu -5 306 29 378 306 133 16 chr2 77348253 77348508 -173339346 - L2 LINE L2 -666 2648 2364 2263 92 26 0 chr2 77348957 77349261 -173338593 + AluSq SINE Alu 2 313 0 1338 176 39 29 chr2 77349261 77349567 -173338287 - L1MB8 LINE L1 -56 6122 5814 1291 137 16 0 chr2 77349579 77349769 -173338085 - AluJo SINE Alu -38 274 82 282 233 11 44 chr2 77350616 77350706 -173337148 + MIR SINE MIR 44 130 -78 1916 138 64 25 chr2 77351130 77351491 -173336363 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr2 77351869 77351891 -173335963 + AT_rich Low_complexity Low_complexity 1 22 0 2290 117 0 0 chr2 77352156 77352456 -173335398 + AluSq SINE Alu 1 300 -13 337 152 0 63 chr2 77352501 77352580 -173335274 - L1MB7 LINE L1 -2 6182 6109 1583 166 35 28 chr2 77352584 77352868 -173334986 + AluJo SINE Alu 8 293 -19 719 64 18 37 chr2 77352889 77352998 -173334856 + AluSq/x SINE Alu 16 122 -191 288 0 0 0 chr2 77353174 77353206 -173334648 + (TA)n Simple_repeat Simple_repeat 2 33 0 2262 123 3 0 chr2 77353206 77353514 -173334340 - AluSx SINE Alu -3 309 1 281 234 47 0 chr2 77353514 77353578 -173334276 + Tigger2 DNA MER2_type 2652 2718 0 519 236 68 40 chr2 77353579 77353727 -173334127 + L2 LINE L2 3158 3309 -4 613 257 111 54 chr2 77354146 77354496 -173333358 + MER57B LTR ERV1 65 434 0 1136 184 42 9 chr2 77354603 77354815 -173333039 + MER20 DNA MER1_type 1 219 0 2106 106 10 30 chr2 77354966 77355268 -173332586 - AluSx SINE Alu -14 298 3 313 254 40 40 chr2 77355275 77355401 -173332453 - L1MB8 LINE L1 -285 5836 5711 441 289 108 10 chr2 77355437 77355641 -173332213 - L1MB8 LINE L1 -1823 4323 4100 2341 105 0 3 chr2 77355699 77356003 -173331851 + AluSq SINE Alu 1 303 -10 2296 107 3 0 chr2 77357091 77357381 -173330473 + AluSx SINE Alu 1 291 -21 927 127 0 11 chr2 77357717 77357984 -173329870 + (G)n Simple_repeat Simple_repeat 1 265 0 746 264 99 0 chr2 77358533 77358745 -173329109 - MIR SINE MIR -29 233 1 2370 87 10 0 chr2 77359003 77359302 -173328552 - AluSx SINE Alu -10 302 1 260 61 0 93 chr2 77359303 77359362 -173328492 - FLAM_A SINE Alu -9 124 77 1323 86 6 11 chr2 77359498 77359673 -173328181 + AluSp SINE Alu 1 174 -139 763 153 35 0 chr2 77359918 77360062 -173327792 + L1MD3 LINE L1 7845 7993 -2 255 191 0 0 chr2 77360296 77360343 -173327511 + MER69 DNA AcHobo 12 58 -1168 407 273 0 96 chr2 77360431 77360640 -173327214 - LTR67 LTR ERVL -367 190 2 2184 117 7 16 chr2 77360848 77361156 -173326698 + AluSq SINE Alu 1 305 -8 603 125 11 0 chr2 77361303 77361391 -173326463 - 5S rRNA rRNA -31 90 2 207 250 134 46 chr2 77361395 77361611 -173326243 + L2 LINE L2 2394 2628 -686 2272 116 3 10 chr2 77361983 77362293 -173325561 - AluSx SINE Alu -4 308 1 370 265 96 0 chr2 77362706 77362842 -173325012 + MLT1J LTR MaLR 291 439 -72 1142 126 0 18 chr2 77362844 77363011 -173324843 - AluSg/x SINE Alu -12 298 135 264 321 107 0 chr2 77363279 77363363 -173324491 + MIR3 SINE MIR 82 174 -34 343 254 86 80 chr2 77363395 77363631 -173324223 + MIR SINE MIR 7 250 -12 252 149 64 53 chr2 77363690 77363784 -173324070 - L2 LINE L2 -245 3027 2933 206 333 65 35 chr2 77363897 77364098 -173323756 - L2 LINE L2 -217 3055 2849 2226 109 3 0 chr2 77364527 77364820 -173323034 - AluSx SINE Alu -18 294 1 309 212 59 12 chr2 77365006 77365091 -173322763 - MIR3 SINE MIR -109 99 11 244 230 243 0 chr2 77365511 77365585 -173322269 - L2 LINE L2 -1 3271 3180 632 264 83 36 chr2 77365621 77365897 -173321957 + MARNA DNA Mariner 254 542 -44 205 214 117 107 chr2 77366251 77366354 -173321500 - MIR SINE MIR -70 192 89 379 267 18 73 chr2 77366459 77366624 -173321230 + MER5B DNA MER1_type 1 156 -22 1585 172 3 71 chr2 77366883 77367180 -173320674 - AluJo SINE Alu -23 289 13 23 0 0 0 chr2 77367220 77367243 -173320611 + AT_rich Low_complexity Low_complexity 1 23 0 231 182 125 45 chr2 77367344 77367357 -173320497 - L1P LINE L1 -741 5410 5399 216 0 0 0 chr2 77367357 77367381 -173320473 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1994 117 0 31 chr2 77367383 77367673 -173320181 - AluSx SINE Alu -31 281 1 231 182 125 45 chr2 77367673 77367744 -173320110 - L1P LINE L1 -752 5399 5316 2572 58 0 6 chr2 77368024 77368336 -173319518 + AluY SINE Alu 1 310 -1 676 142 0 0 chr2 77368677 77368783 -173319071 - MER53 DNA DNA -83 106 1 218 56 28 0 chr2 77368952 77368988 -173318866 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 2221 123 0 16 chr2 77369267 77369584 -173318270 - AluSx SINE Alu 0 312 1 419 270 135 25 chr2 77369929 77369993 -173317861 - MER5A DNA MER1_type 0 189 133 1653 170 40 17 chr2 77369993 77370293 -173317561 + AluJo SINE Alu 1 307 -5 419 270 135 25 chr2 77370293 77370391 -173317463 - MER5A DNA MER1_type -56 133 9 187 344 62 46 chr2 77370942 77371137 -173316717 - MIR SINE MIR -18 244 47 1663 164 109 0 chr2 77371574 77371848 -173316006 - AluJb SINE Alu -8 304 1 370 311 105 40 chr2 77372030 77372307 -173315547 + L2 LINE L2 2395 2689 -625 284 280 40 40 chr2 77372381 77372481 -173315373 - L2 LINE L2 -196 3076 2977 1251 245 77 16 chr2 77372844 77373219 -173314635 + MLT1I LTR MaLR 12 409 0 1930 111 93 0 chr2 77373405 77373684 -173314170 + AluSq SINE Alu 1 305 -8 449 244 50 17 chr2 77373861 77373980 -173313874 + MIR SINE MIR 47 169 -93 764 168 104 12 chr2 77374779 77374952 -173312902 - MER5A DNA MER1_type 0 189 1 2391 57 11 0 chr2 77425316 77425596 -173262258 + AluY SINE Alu 1 283 -28 767 86 29 0 chr2 77425491 77425596 -173262258 + AluY SINE Alu 176 320 0 212 27 27 27 chr2 77425596 77425633 -173262221 + (CAAA)n Simple_repeat Simple_repeat 2 180 0 603 269 74 37 chr2 77425714 77425930 -173261924 - MIR SINE MIR -34 228 5 664 281 82 67 chr2 77426030 77426386 -173261468 + L1MC4a LINE L1 6542 6902 -906 477 186 50 91 chr2 77426393 77426592 -173261262 + L1MC5 LINE L1 7251 7441 -520 509 284 18 11 chr2 77427011 77427294 -173260560 + L1MB4 LINE L1 5327 5655 -509 2753 187 15 4 chr2 77427370 77427904 -173259950 + L1MB4 LINE L1 5635 6174 -6 1831 128 38 57 chr2 77427906 77427957 -173259897 + L1MB5 LINE L1 5816 5866 -308 2334 105 3 0 chr2 77427957 77428251 -173259603 - AluSq SINE Alu -14 299 5 1831 128 38 57 chr2 77428251 77428565 -173259289 + L1MB5 LINE L1 5866 6174 0 353 217 0 0 chr2 77428566 77428649 -173259205 + L1ME1 LINE L1 5821 5903 -263 373 164 19 77 chr2 77428651 77428755 -173259099 + L1MC4a LINE L1 6294 6391 -1417 853 198 50 10 chr2 77428760 77428962 -173258892 + L1MD3 LINE L1 7713 7922 -73 2196 116 3 0 chr2 77429087 77429379 -173258475 - AluSx SINE Alu -18 294 2 252 0 0 0 chr2 77430193 77430221 -173257633 + (T)n Simple_repeat Simple_repeat 1 28 0 182 177 63 89 chr2 77430565 77430644 -173257210 + MIR3 SINE MIR 1 77 -131 1003 182 21 27 chr2 77430968 77431155 -173256699 - MER5A DNA MER1_type 0 189 4 231 36 0 0 chr2 77431366 77431394 -173256460 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 26 50 0 0 chr2 77431930 77431970 -173255884 + AT_rich Low_complexity Low_complexity 1 40 0 429 259 89 83 chr2 77432131 77432456 -173255398 - L1MC4a LINE L1 -1880 5928 5602 236 217 50 0 chr2 77432496 77432556 -173255298 + L1M4 LINE L1 3764 3826 -2320 27 0 0 0 chr2 77432615 77432642 -173255212 + AT_rich Low_complexity Low_complexity 1 27 0 2393 89 3 3 chr2 77432812 77433115 -173254739 + AluSg SINE Alu 1 303 -7 831 252 23 54 chr2 77433275 77433533 -173254321 - MIR SINE MIR 0 262 13 299 301 19 10 chr2 77433534 77433637 -173254217 + MIR3 SINE MIR 68 171 -37 230 36 0 0 chr2 77435446 77435474 -173252380 + L1M3 LINE L1 5822 5849 -334 202 309 73 41 chr2 77436766 77436889 -173250965 + L2 LINE L2 3144 3270 -2 826 116 72 0 chr2 77437952 77438090 -173249764 + L1MB3 LINE L1 5820 5967 -216 2269 91 7 0 chr2 77438864 77439150 -173248704 - AluSg SINE Alu -20 290 3 731 112 0 60 chr2 77439152 77439268 -173248586 - AluSg/x SINE Alu -18 292 184 671 280 44 22 chr2 77439576 77439801 -173248053 - MIR SINE MIR -11 251 22 252 248 9 18 chr2 77439953 77440062 -173247792 + CT-rich Low_complexity Low_complexity 3 110 0 1786 152 4 0 chr2 77440086 77440356 -173247498 + AluJb SINE Alu 1 271 -41 1948 158 37 0 chr2 77440468 77440765 -173247089 + AluJb SINE Alu 1 308 -4 874 196 0 0 chr2 77441008 77441151 -173246703 - AluJb SINE Alu -12 300 158 374 205 73 66 chr2 77441154 77441305 -173246549 - LTR27 LTR ERV1 0 636 485 2482 174 15 29 chr2 77441345 77441896 -173245958 - LTR27 LTR ERV1 -139 497 4 910 209 71 5 chr2 77441966 77442162 -173245692 - MIR SINE MIR -5 257 49 648 184 251 0 chr2 77442311 77442474 -173245380 - MIR SINE MIR 0 262 59 2084 147 0 3 chr2 77442516 77442816 -173245038 + AluSx SINE Alu 1 299 -13 2092 124 3 13 chr2 77442845 77443144 -173244710 + AluSx SINE Alu 1 296 -16 2287 78 46 0 chr2 77443254 77443537 -173244317 + AluSx SINE Alu 1 296 -16 3354 130 2 10 chr2 77444293 77444810 -173243044 + MER75 DNA T2_type 1 513 -1 342 273 31 47 chr2 77444986 77445114 -173242740 - MIR SINE MIR -134 128 3 1949 144 3 7 chr2 77445518 77445802 -173242052 + AluJb SINE Alu 7 289 -23 348 266 133 21 chr2 77445804 77445947 -173241907 + L1MC4 LINE L1 7879 8037 -5 186 208 0 0 chr2 77446092 77446140 -173241714 + (TGG)n Simple_repeat Simple_repeat 1 48 0 1156 200 133 31 chr2 77446467 77446880 -173240974 - MLT1C LTR MaLR -7 460 1 958 162 87 0 chr2 77447144 77447317 -173240537 + MER20 DNA MER1_type 32 219 0 657 304 69 76 chr2 77448872 77449191 -173238663 + L2 LINE L2 2813 3130 -142 1336 165 9 5 chr2 77449191 77449409 -173238445 + MER20 DNA MER1_type 1 219 0 657 304 69 76 chr2 77449409 77449550 -173238304 + L2 LINE L2 3130 3270 -2 322 308 26 0 chr2 77450371 77450488 -173237366 + MIR3 SINE MIR 88 207 -1 2369 91 0 0 chr2 77450584 77450880 -173236974 + AluSx SINE Alu 1 296 -16 584 317 160 37 chr2 77451795 77452177 -173235677 + L3 LINE CR1 1091 1519 -58 2319 105 0 3 chr2 77453056 77453362 -173234492 - AluSc SINE Alu -4 305 1 251 292 35 26 chr2 77453554 77453655 -173234199 - MER5A DNA MER1_type -3 186 82 823 161 0 36 chr2 77453655 77453792 -173234062 + FLAM_A SINE Alu 1 132 -1 251 292 35 26 chr2 77453792 77453803 -173234051 - MER5A DNA MER1_type -107 82 73 503 171 31 26 chr2 77453806 77454030 -173233824 + GA-rich Low_complexity Low_complexity 1 224 0 362 205 72 24 chr2 77454041 77454124 -173233730 + MER5A DNA MER1_type 103 189 0 1981 133 0 4 chr2 77455447 77455711 -173232143 + AluSx SINE Alu 1 263 -49 726 246 108 0 chr2 77455791 77455986 -173231868 + MIR SINE MIR 26 241 -21 211 227 0 23 chr2 77456515 77456559 -173231295 + MER5B DNA MER1_type 10 52 -126 2419 100 0 3 chr2 77456631 77456942 -173230912 - AluSx SINE Alu -2 310 1 1047 157 0 0 chr2 77456970 77457151 -173230703 + AluSg/x SINE Alu 134 314 0 1473 146 0 5 chr2 77457618 77457830 -173230024 - AluJo SINE Alu -17 295 85 250 345 65 7 chr2 77458088 77458227 -173229627 - L2 LINE L2 -209 3063 2917 300 111 0 0 chr2 77458341 77458395 -173229459 + (TA)n Simple_repeat Simple_repeat 1 54 0 1634 232 111 43 chr2 77459229 77460268 -173227586 - L1ME LINE L1 -657 5507 4379 2264 95 0 0 chr2 77460268 77460581 -173227273 - AluSx SINE Alu 0 313 1 1634 232 111 43 chr2 77460581 77460629 -173227225 - L1ME LINE L1 -1785 4379 4336 2475 70 0 0 chr2 77461125 77461423 -173226431 + AluY SINE Alu 1 298 -13 395 188 12 12 chr2 77461600 77461680 -173226174 + MER116 DNA Mariner 1 80 0 342 244 0 0 chr2 77461719 77461797 -173226057 + HAL1 LINE L1 2071 2148 -359 320 283 35 43 chr2 77462145 77462375 -173225479 + HAL1 LINE L1 2276 2503 -4 673 281 60 0 chr2 77462904 77463089 -173224765 - MIR SINE MIR -44 218 23 965 158 54 27 chr2 77463658 77463842 -173224012 + MER5A DNA MER1_type 1 189 0 2343 94 7 3 chr2 77463924 77464233 -173223621 + AluY SINE Alu 1 310 -1 378 292 107 12 chr2 77466695 77466863 -173220991 - MIR SINE MIR -72 190 7 2528 84 0 0 chr2 77467294 77467605 -173220249 + AluSq SINE Alu 1 311 -2 449 219 12 0 chr2 77467861 77467943 -173219911 + 7SLRNA srpRNA srpRNA 1 83 -237 1639 116 167 4 chr2 77468261 77468519 -173219335 + AluJo SINE Alu 1 300 -12 2132 94 3 49 chr2 77468845 77469153 -173218701 + AluSx SINE Alu 1 294 -18 809 176 0 0 chr2 77469165 77469296 -173218558 + FLAM_C SINE Alu 1 131 -2 2226 113 13 7 chr2 77469746 77470055 -173217799 - AluSx SINE Alu -1 311 1 209 238 133 77 chr2 77470713 77470856 -173216998 - MIR SINE MIR 0 262 112 283 162 73 0 chr2 77471933 77472001 -173215853 + L1MC4 LINE L1 7970 8042 0 423 220 40 10 chr2 77472230 77472330 -173215524 + MER5B DNA MER1_type 72 174 -4 278 167 75 50 chr2 77472468 77472569 -173215285 - MIR SINE MIR -62 146 50 240 178 219 0 chr2 77472581 77472654 -173215200 - L1ME1 LINE L1 -1 6165 6077 577 195 81 32 chr2 77472654 77472777 -173215077 + MER5A DNA MER1_type 60 188 -1 202 298 57 85 chr2 77472657 77472787 -173215067 - MER5A DNA MER1_type -51 138 11 * 2264 114 0 0 chr2 77472787 77473085 -173214769 - AluSx SINE Alu -14 298 1 189 267 155 43 chr2 77474204 77474320 -173213534 - MIR3 SINE MIR -1 207 79 212 286 63 0 chr2 77474697 77474760 -173213094 - L2 LINE L2 -1 3312 3246 2378 86 0 7 chr2 77475094 77475395 -173212459 + AluSg SINE Alu 1 299 -11 1572 184 104 13 chr2 77475641 77475950 -173211904 - MER1B DNA MER1_type 0 337 1 2275 81 0 10 chr2 77477253 77477563 -173210291 + AluY SINE Alu 1 307 -4 2507 61 0 0 chr2 77477580 77477891 -173209963 + AluY SINE Alu 1 311 0 453 19 0 0 chr2 77479165 77479219 -173208635 + (CA)n Simple_repeat Simple_repeat 2 55 0 188 219 49 0 chr2 77479830 77479871 -173207983 + MIR SINE MIR 103 145 -117 25 0 0 0 chr2 77479968 77479993 -173207861 + AT_rich Low_complexity Low_complexity 1 25 0 2047 108 3 3 chr2 77480292 77480588 -173207266 + AluSx SINE Alu 1 296 -16 327 227 0 15 chr2 77481291 77481357 -173206497 + L2 LINE L2 3194 3258 -14 1482 187 14 14 chr2 77481488 77481777 -173206077 + AluJo SINE Alu 2 290 -12 23 33 0 0 chr2 77481777 77481807 -173206047 + AT_rich Low_complexity Low_complexity 1 30 0 2146 117 0 0 chr2 77482487 77482785 -173205069 + AluSx SINE Alu 1 298 -14 754 158 0 30 chr2 77482835 77482968 -173204886 + FLAM_C SINE Alu 5 133 0 1863 151 0 40 chr2 77484805 77485129 -173202725 + AluJb SINE Alu 1 311 -1 1786 151 6 19 chr2 77485191 77485503 -173202351 + AluSx SINE Alu 1 308 -4 2083 113 7 7 chr2 77485827 77486137 -173201717 + AluSx SINE Alu 1 310 -2 200 200 0 25 chr2 77486142 77486182 -173201672 + G-rich Low_complexity Low_complexity 4 42 0 316 153 14 14 chr2 77486182 77486254 -173201600 + GA-rich Low_complexity Low_complexity 1 72 0 343 133 0 0 chr2 77486263 77486308 -173201546 + Alu SINE Alu 1 45 -258 1110 49 0 7 chr2 77486308 77486450 -173201404 + AluSg/x SINE Alu 164 304 -8 22 0 0 0 chr2 77486867 77486889 -173200965 + AT_rich Low_complexity Low_complexity 1 22 0 2261 90 7 0 chr2 77487310 77487609 -173200245 + AluSg SINE Alu 1 301 -9 621 130 7 143 chr2 77488680 77488834 -173199020 + FLAM_C SINE Alu 1 133 0 2271 85 0 28 chr2 77488844 77489161 -173198693 + AluY SINE Alu 1 308 -3 2101 109 13 0 chr2 77489225 77489529 -173198325 + AluSx SINE Alu 1 308 -4 1231 183 102 4 chr2 77490214 77490460 -173197394 + AluJo SINE Alu 5 274 -38 257 158 35 0 chr2 77490467 77490524 -173197330 + G-rich Low_complexity Low_complexity 5 63 0 203 173 77 58 chr2 77490906 77490958 -173196896 - MIR SINE MIR -110 152 100 395 131 16 0 chr2 77490966 77491027 -173196827 + AluS SINE Alu 1 62 -239 329 192 0 0 chr2 77491364 77491416 -173196438 + L1MC4 LINE L1 6652 6703 -1339 238 152 0 0 chr2 77491420 77491466 -173196388 - L1MC4 LINE L1 -1339 6703 6658 1911 136 0 17 chr2 77491909 77492204 -173195650 - AluSg SINE Alu -20 290 1 2081 298 80 68 chr2 77493908 77494568 -173193286 + L1MC4 LINE L1 6889 7566 -476 2208 91 10 0 chr2 77494568 77494865 -173192989 - AluSx SINE Alu -12 300 1 2081 298 80 68 chr2 77494865 77495196 -173192658 + L1MC4 LINE L1 7566 7892 -150 266 182 15 0 chr2 77495196 77495262 -173192592 + (TATATG)n Simple_repeat Simple_repeat 4 70 0 1019 93 157 0 chr2 77495286 77495497 -173192357 - Tigger2 DNA MER2_type -14 2704 2451 1965 164 9 6 chr2 77495528 77495858 -173191996 - Tigger2 DNA MER2_type -1941 777 447 500 88 0 152 chr2 77495858 77495895 -173191959 - Tigger2 DNA MER2_type -2447 271 230 2107 112 0 0 chr2 77495895 77496182 -173191672 + AluSg SINE Alu 1 287 -23 500 88 0 152 chr2 77496182 77496269 -173191585 - Tigger2 DNA MER2_type -2488 230 166 370 250 10 0 chr2 77496298 77496398 -173191456 + L1MC4 LINE L1 7942 8042 0 819 161 12 37 chr2 77496413 77496562 -173191292 + AluJb SINE Alu 152 298 -14 1632 124 0 0 chr2 77496562 77496788 -173191066 + AluSx SINE Alu 1 226 -86 819 161 12 37 chr2 77496788 77496799 -173191055 + AluJb SINE Alu 298 308 -4 183 256 144 32 chr2 77496812 77496937 -173190917 + L2 LINE L2 2520 2658 -656 303 119 0 0 chr2 77497101 77497143 -173190711 - Alu SINE Alu -259 43 2 366 59 0 0 chr2 77497180 77497231 -173190623 - L1MA5A LINE L1 -2 6295 6245 1948 102 16 33 chr2 77497231 77497534 -173190320 - AluSx SINE Alu -10 302 5 2518 81 22 3 chr2 77497537 77497894 -173189960 - L1M2 LINE L1 -610 5687 5324 1630 182 7 3 chr2 77497910 77498207 -173189647 - AluJb SINE Alu -14 298 1 1493 169 67 6 chr2 77498365 77498679 -173189175 - L1PB3 LINE L1 -6 6148 5816 6900 146 5 41 chr2 77498679 77499064 -173188790 - L1PB3 LINE L1 -851 5295 4897 2192 105 0 7 chr2 77499064 77499369 -173188485 - AluSx SINE Alu -9 303 1 6900 146 5 41 chr2 77499369 77499396 -173188458 - L1PB3 LINE L1 -1249 4897 4871 492 84 121 0 chr2 77499396 77499479 -173188375 - L1MB4 LINE L1 -2 6178 6086 1673 87 4 4 chr2 77499479 77499705 -173188149 - L1PB2 LINE L1 -1 6150 5920 6900 146 5 41 chr2 77499705 77500543 -173187311 - L1PB3 LINE L1 -1274 4872 4092 2113 80 21 3 chr2 77500543 77500830 -173187024 - AluSg SINE Alu -18 292 1 6900 146 5 41 chr2 77500830 77500903 -173186951 - L1PB3 LINE L1 -2054 4092 4018 2124 114 0 19 chr2 77500903 77501218 -173186636 - AluSg SINE Alu -1 309 1 33 25 0 0 chr2 77501314 77501354 -173186500 + AT_rich Low_complexity Low_complexity 1 40 0 206 299 116 48 chr2 77501716 77501923 -173185931 - L2 LINE L2 -480 2834 2614 430 263 11 11 chr2 77502133 77502228 -173185626 + MIR SINE MIR 21 115 -147 388 266 5 5 chr2 77502232 77502343 -173185511 + MER115 DNA AcHobo 3 113 -580 350 197 61 0 chr2 77502363 77502429 -173185425 + MER91C DNA MER1_type 60 129 -11 274 294 130 11 chr2 77503599 77503776 -173184078 + L3 LINE CR1 709 906 -671 192 251 221 43 chr2 77503843 77504006 -173183848 - MIR SINE MIR 0 262 71 326 269 69 93 chr2 77504037 77504398 -173183456 + L3 LINE CR1 960 1381 -196 245 279 0 0 chr2 77505467 77505535 -173182319 + A-rich Low_complexity Low_complexity 1 68 0 27 0 0 0 chr2 77505770 77505797 -173182057 + AT_rich Low_complexity Low_complexity 1 27 0 1953 96 4 0 chr2 77515077 77515337 -173172517 + AluSq SINE Alu 38 298 -15 429 271 181 16 chr2 77515340 77515765 -173172089 - L1ME4a LINE L1 -1 6120 5626 1684 216 66 39 chr2 77515954 77516497 -173171357 + MER74A LTR ERVL 1 558 0 348 83 0 0 chr2 77516698 77516746 -173171108 + (TG)n Simple_repeat Simple_repeat 1 48 0 2024 141 3 3 chr2 77516812 77517124 -173170730 - AluJb SINE Alu 0 312 1 2316 90 0 3 chr2 77517137 77517449 -173170405 - AluSq SINE Alu -2 311 1 254 272 65 42 chr2 77517827 77518044 -173169810 + L1MB4 LINE L1 5294 5515 -647 408 233 174 24 chr2 77518156 77518403 -173169451 + L1ME4a LINE L1 5722 6017 -104 30 0 0 0 chr2 77518416 77518446 -173169408 + AT_rich Low_complexity Low_complexity 1 30 0 1003 270 186 35 chr2 77518910 77519933 -173167921 + L2 LINE L2 2138 3313 0 261 0 0 0 chr2 77521473 77521502 -173166352 + (CAGCC)n Simple_repeat Simple_repeat 5 33 0 569 202 77 55 chr2 77521575 77521616 -173166238 - MER3 DNA MER1_type -22 187 148 2005 112 20 10 chr2 77521616 77521910 -173165944 - AluSx SINE Alu -15 297 1 569 202 77 55 chr2 77521910 77522051 -173165803 - MER3 DNA MER1_type -61 148 1 381 323 115 30 chr2 77522375 77522610 -173165244 + MIR SINE MIR 2 256 -6 1702 209 49 49 chr2 77524498 77524826 -173163028 + L1ME1 LINE L1 5724 6054 -112 2093 134 0 0 chr2 77524826 77525132 -173162722 - AluSx SINE Alu -6 306 1 1702 209 49 49 chr2 77525132 77525234 -173162620 + L1ME1 LINE L1 6053 6154 -12 2059 116 17 0 chr2 77525273 77525567 -173162287 - AluSg SINE Alu -11 299 1 3001 186 19 7 chr2 77526523 77527105 -173160749 + L1MB4 LINE L1 5564 6152 -28 1927 143 0 10 chr2 77527117 77527425 -173160429 - AluJo SINE Alu -7 305 1 466 165 0 52 chr2 77527442 77527539 -173160315 + L1MB8 LINE L1 6081 6172 -6 198 314 164 7 chr2 77527813 77527953 -173159901 - L2 LINE L2 -552 2762 2601 1438 130 54 9 chr2 77528135 77528358 -173159496 + MER1B DNA MER1_type 1 233 -64 362 78 20 0 chr2 77528350 77528401 -173159453 + MER1B DNA MER1_type 282 333 0 * 440 293 9 84 chr2 77528523 77528738 -173159116 - MER102a DNA MER1_type -30 300 102 914 168 111 0 chr2 77528771 77528979 -173158875 - L1MB3 LINE L1 0 6183 5953 1179 149 20 0 chr2 77528980 77529175 -173158679 - AluY SINE Alu -15 296 98 2076 100 4 11 chr2 77529175 77529479 -173158375 + AluSc SINE Alu 1 302 0 2218 79 3 63 chr2 77529575 77529893 -173157961 + AluSp SINE Alu 1 299 -14 784 148 9 0 chr2 77530960 77531103 -173156751 + FLAM_C SINE Alu 2 145 0 2239 112 3 0 chr2 77531479 77531782 -173156072 + AluSg SINE Alu 1 304 -6 2154 119 0 0 chr2 77532388 77532673 -173155181 + AluSx SINE Alu 1 285 -27 725 0 12 0 chr2 77532673 77532758 -173155096 + (CTAAA)n Simple_repeat Simple_repeat 3 88 0 795 159 126 0 chr2 77532954 77533105 -173154749 - AluYa5 SINE Alu -10 301 132 2080 130 3 20 chr2 77533296 77533597 -173154257 + AluSx SINE Alu 1 296 -16 2116 102 0 57 chr2 77533918 77534233 -173153621 + AluSc SINE Alu 1 297 -12 302 246 0 105 chr2 77534463 77534577 -173153277 + L1MC4 LINE L1 6601 6702 -1340 189 107 0 0 chr2 77534772 77534800 -173153054 + (A)n Simple_repeat Simple_repeat 1 28 0 1429 154 106 41 chr2 77535104 77535397 -173152457 + AluJb SINE Alu 1 312 0 2194 122 0 0 chr2 77535467 77535754 -173152100 + AluSx SINE Alu 12 298 -14 224 348 135 11 chr2 77536732 77536821 -173151033 + L2 LINE L2 3194 3293 -20 1109 83 122 0 chr2 77537014 77537170 -173150684 - FRAM SINE Alu -8 168 1 745 153 23 73 chr2 77537170 77537366 -173150488 - L1MB3 LINE L1 -38 6136 5950 316 148 0 19 chr2 77538431 77538485 -173149369 - L2 LINE L2 0 3313 3261 300 127 18 0 chr2 77538511 77538566 -173149288 + L1MC4 LINE L1 7119 7174 -868 952 183 17 6 chr2 77538569 77538744 -173149110 + AluJb SINE Alu 130 306 -6 384 120 43 145 chr2 77538791 77538863 -173148991 + L1MC4 LINE L1 7196 7253 -789 617 158 274 0 chr2 77538863 77539009 -173148845 + MER53 DNA DNA 1 186 -3 384 120 43 145 chr2 77539009 77539053 -173148801 + L1MC4 LINE L1 7253 7300 -742 2057 117 13 10 chr2 77539058 77539366 -173148488 + AluSq SINE Alu 1 309 -4 288 203 14 54 chr2 77539366 77539440 -173148414 + MLT1B LTR MaLR 259 329 -61 474 188 77 8 chr2 77539440 77539557 -173148297 + L1MC4 LINE L1 7330 7454 -588 1515 158 118 115 chr2 77539728 77540154 -173147700 + L1MC4 LINE L1 7481 7904 -91 1560 167 39 97 chr2 77540154 77540220 -173147634 - MLT1B LTR MaLR 0 390 322 2181 132 7 0 chr2 77540220 77540523 -173147331 + AluSx SINE Alu 1 305 -7 1560 167 39 97 chr2 77540523 77540686 -173147168 - MLT1B LTR MaLR -68 322 193 1737 190 0 13 chr2 77540686 77541002 -173146852 - AluJb SINE Alu 0 312 1 1560 167 39 97 chr2 77541002 77541185 -173146669 - MLT1B LTR MaLR -197 193 1 1515 158 118 115 chr2 77541185 77541325 -173146529 + L1MC4 LINE L1 7904 7994 -1 1680 121 0 0 chr2 77541349 77541573 -173146281 - AluSg/x SINE Alu -2 310 87 487 171 33 99 chr2 77541937 77542089 -173145765 + LTR8A LTR ERV1 1 142 -585 * 725 223 38 38 chr2 77542068 77542131 -173145723 + LTR8 LTR ERV1 507 569 -122 2091 81 36 72 chr2 77542131 77542438 -173145416 + AluSg SINE Alu 1 296 -14 725 223 38 38 chr2 77542438 77542558 -173145296 + LTR8 LTR ERV1 568 690 -1 21 0 0 0 chr2 77542575 77542596 -173145258 + AT_rich Low_complexity Low_complexity 1 21 0 1765 149 19 4 chr2 77542692 77542960 -173144894 + AluJo SINE Alu 11 282 -30 2170 117 0 0 chr2 77542960 77543281 -173144573 + AluSc SINE Alu 1 321 0 1649 142 61 30 chr2 77543287 77543397 -173144457 + AluJb SINE Alu 1 106 -206 4640 94 1 58 chr2 77543397 77543729 -173144125 + MER4A LTR ERV1 1 275 -389 2159 99 7 0 chr2 77543729 77544048 -173143806 - AluSq SINE Alu 0 321 1 4640 94 1 58 chr2 77544048 77544418 -173143436 + MER4A LTR ERV1 275 664 0 1649 142 61 30 chr2 77544418 77544477 -173143377 + AluJb SINE Alu 106 162 -150 1954 226 33 72 chr2 77544477 77545114 -173142740 - LTR9 LTR ERV1 0 612 1 1649 142 61 30 chr2 77545114 77545239 -173142615 + AluJb SINE Alu 162 305 -7 180 0 0 0 chr2 77545368 77545388 -173142466 + (T)n Simple_repeat Simple_repeat 1 20 0 273 134 179 0 chr2 77545389 77545456 -173142398 - AluYb8 SINE Alu -146 162 84 1216 196 9 5 chr2 77545456 77545675 -173142179 - AluJb SINE Alu -92 220 1 624 184 0 0 chr2 77545913 77546016 -173141838 + AluSg/x SINE Alu 194 296 -16 1089 105 0 7 chr2 77546018 77546171 -173141683 + AluY SINE Alu 1 152 -159 6403 70 12 54 chr2 77546253 77547627 -173140227 + SVA Other Other 344 1386 0 2033 94 90 0 chr2 77547686 77547963 -173139891 - AluSx SINE Alu -10 302 1 892 148 0 22 chr2 77548380 77548515 -173139339 - FLAM_C SINE Alu 0 133 2 511 175 21 10 chr2 77548617 77548714 -173139140 - FLAM_A SINE Alu -19 123 26 2449 70 3 7 chr2 77549182 77549484 -173138370 - AluY SINE Alu -10 301 1 1502 155 69 9 chr2 77551046 77551363 -173136491 + L1MC3 LINE L1 7450 7785 0 1506 176 72 11 chr2 77551396 77551498 -173136356 + AluJb SINE Alu 14 108 -204 204 40 0 0 chr2 77551498 77551523 -173136331 + (CAA)n Simple_repeat Simple_repeat 3 27 0 1506 176 72 11 chr2 77551523 77551699 -173136155 + AluJb SINE Alu 108 309 -3 2317 91 3 52 chr2 77551699 77552028 -173135826 + AluSp SINE Alu 1 313 0 2148 122 7 10 chr2 77552032 77552336 -173135518 + AluSx SINE Alu 1 303 -9 2349 96 0 3 chr2 77552493 77552795 -173135059 + AluSx SINE Alu 1 301 -11 247 276 65 57 chr2 77553758 77553881 -173133973 + MER5B DNA MER1_type 55 178 0 1650 169 14 11 chr2 77555090 77555368 -173132486 - AluJo SINE Alu -33 279 1 2220 113 0 49 chr2 77555568 77555896 -173131958 - AluSx SINE Alu 0 312 1 2090 174 54 64 chr2 77555967 77556417 -173131437 - MLT1F1 LTR MaLR -2 565 119 2406 101 0 0 chr2 77556417 77556725 -173131129 - AluSg SINE Alu -2 308 1 2090 174 54 64 chr2 77556725 77556790 -173131064 - MLT1F1 LTR MaLR -448 119 55 568 289 116 44 chr2 77557311 77557716 -173130138 - LTR67 LTR ERVL -43 514 81 596 249 91 64 chr2 77558488 77558634 -173129220 - L1MC4a LINE L1 -1638 6170 6029 1978 170 0 0 chr2 77558634 77558934 -173128920 - AluJb SINE Alu -12 300 1 596 249 91 64 chr2 77558934 77559055 -173128799 - L1MC4a LINE L1 -1779 6029 5913 1279 98 132 5 chr2 77559055 77559259 -173128595 - MER30 DNA MER1_type 0 230 1 596 249 91 64 chr2 77559259 77559440 -173128414 - L1MC4a LINE L1 -1895 5913 5709 379 265 104 49 chr2 77559856 77560211 -173127643 + MLT1K LTR MaLR 179 580 -8 287 346 88 15 chr2 77560234 77560370 -173127484 - MIR3 SINE MIR -37 171 26 339 288 90 9 chr2 77560810 77560921 -173126933 - MIR3 SINE MIR -21 187 68 248 258 30 15 chr2 77560926 77560992 -173126862 - L2 LINE L2 -13 3259 3193 187 293 0 69 chr2 77561676 77561734 -173126120 + L2 LINE L2 3204 3257 -15 834 128 56 0 chr2 77562550 77562675 -173125179 + AluJb SINE Alu 3 134 -178 2313 82 0 0 chr2 77562687 77562966 -173124888 + AluSx SINE Alu 1 279 -33 293 254 0 0 chr2 77563122 77563185 -173124669 - L2 LINE L2 -10 3262 3200 901 244 61 18 chr2 77563417 77563646 -173124208 - MIR SINE MIR -11 251 13 2558 53 0 13 chr2 77565845 77566146 -173121708 - AluY SINE Alu -14 297 1 2412 77 0 35 chr2 77566375 77566685 -173121169 - AluSq SINE Alu -14 299 1 2369 84 0 10 chr2 77566693 77566989 -173120865 - AluSg SINE Alu -12 298 6 192 77 0 0 chr2 77567197 77567223 -173120631 + (TG)n Simple_repeat Simple_repeat 1 26 0 386 343 21 0 chr2 77567388 77567528 -173120326 + MIR3 SINE MIR 52 194 -14 356 245 159 33 chr2 77568274 77568425 -173119429 - MIR SINE MIR -91 171 2 2406 104 3 0 chr2 77568671 77568979 -173118875 - AluSq SINE Alu -4 309 1 225 65 0 0 chr2 77570334 77570365 -173117489 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 382 340 104 7 chr2 77571046 77571325 -173116529 - L2 LINE L2 -589 2725 2420 594 289 206 15 chr2 77571908 77572064 -173115790 + MLT1K LTR MaLR 78 203 -385 1200 148 20 0 chr2 77572064 77572260 -173115594 - L1PA16 LINE L1 -3 6163 5964 594 289 206 15 chr2 77572260 77572442 -173115412 + MLT1K LTR MaLR 203 481 -107 214 258 67 34 chr2 77572452 77572541 -173115313 - L3 LINE CR1 -1301 276 185 951 144 0 13 chr2 77572551 77572704 -173115150 + AluSq/x SINE Alu 1 151 -162 2269 127 0 0 chr2 77572895 77573203 -173114651 + AluSx SINE Alu 1 308 -4 227 241 149 0 chr2 77573473 77573560 -173114294 + L2 LINE L2 3123 3222 -91 426 330 80 18 chr2 77574279 77574503 -173113351 + LTR67 LTR ERVL 252 489 -68 1770 163 24 3 chr2 77574608 77574896 -173112958 + AluJb SINE Alu 1 294 -18 2018 94 21 97 chr2 77576562 77576893 -173110961 + AluYb8 SINE Alu 1 306 -12 22 0 0 0 chr2 77577079 77577101 -173110753 + AT_rich Low_complexity Low_complexity 1 22 0 621 163 37 52 chr2 77579489 77579624 -173108230 - FLAM_C SINE Alu 0 133 1 4106 172 70 19 chr2 77579645 77580418 -173107436 + MER21B LTR ERV1 1 812 -51 22 35 0 0 chr2 77580544 77580573 -173107281 + AT_rich Low_complexity Low_complexity 1 29 0 2267 108 6 19 chr2 77580582 77580897 -173106957 + AluSx SINE Alu 1 311 -1 2238 86 31 0 chr2 77581190 77581480 -173106374 + AluSg SINE Alu 1 299 -11 1582 158 54 4 chr2 77581993 77582252 -173105602 - AluJb SINE Alu -23 289 18 1593 188 0 0 chr2 77582517 77582773 -173105081 - AluSx SINE Alu -30 282 27 528 237 7 44 chr2 77582889 77583024 -173104830 + FLAM_C SINE Alu 7 136 -7 2321 55 3 58 chr2 77583085 77583397 -173104457 + AluSg SINE Alu 1 295 -15 1774 105 0 4 chr2 77583526 77583764 -173104090 + AluSg/x SINE Alu 66 302 -8 2428 53 7 27 chr2 77584044 77584345 -173103509 + AluY SINE Alu 1 295 -16 1718 191 3 10 chr2 77584355 77584649 -173103205 + AluJb SINE Alu 1 292 -20 2104 125 3 7 chr2 77584881 77585184 -173102670 + AluSx SINE Alu 1 302 -10 612 285 126 52 chr2 77585586 77586036 -173101818 + L1ME LINE L1 3876 4291 -1855 1838 158 0 13 chr2 77586036 77586339 -173101515 + AluJo SINE Alu 1 299 -13 612 285 126 52 chr2 77586339 77586891 -173100963 + L1ME LINE L1 4291 4952 -1194 2281 123 3 0 chr2 77586919 77587227 -173100627 + AluSx SINE Alu 1 309 -3 406 236 107 32 chr2 77587426 77587669 -173100185 + L1ME LINE L1 5317 5589 -532 697 164 0 0 chr2 77587721 77587831 -173100023 + FLAM_C SINE Alu 2 111 -32 33 0 0 0 chr2 77587838 77587871 -173099983 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 77588643 77588664 -173099190 + AT_rich Low_complexity Low_complexity 1 21 0 1933 132 7 7 chr2 77589235 77589530 -173098324 + AluSx SINE Alu 1 295 -17 1648 93 51 21 chr2 77589944 77590180 -173097674 - AluSg SINE Alu -16 294 52 1793 169 14 7 chr2 77590537 77590827 -173097027 + AluJo SINE Alu 1 292 -20 1235 174 133 11 chr2 77591065 77591335 -173096519 + AluJo SINE Alu 1 303 -9 1933 167 118 14 chr2 77591566 77591902 -173095952 + Charlie1b DNA MER1_type 2 394 -2367 1929 131 27 3 chr2 77591902 77592199 -173095655 + AluSx SINE Alu 1 304 -8 1933 167 118 14 chr2 77592199 77592293 -173095561 + Charlie1b DNA MER1_type 394 477 -46 1088 55 0 8 chr2 77592393 77592521 -173095333 - AluSc SINE Alu -182 127 1 1862 119 38 0 chr2 77592565 77592826 -173095028 + AluSx SINE Alu 29 299 -13 1084 148 6 0 chr2 77592826 77592988 -173094866 + AluJo/FRAM SINE Alu 134 296 -16 2393 85 0 25 chr2 77593082 77593401 -173094453 + AluSx SINE Alu 1 311 -1 897 158 192 27 chr2 77593431 77593691 -173094163 + L1MC5 LINE L1 7611 7913 -48 2044 127 3 3 chr2 77593705 77594016 -173093838 + AluSx SINE Alu 1 311 0 2209 96 55 0 chr2 77594954 77595246 -173092608 + AluSx SINE Alu 1 308 -4 2419 83 3 16 chr2 77595258 77595571 -173092283 + AluSc SINE Alu 1 309 0 624 194 0 0 chr2 77595585 77595693 -173092161 + FLAM_C SINE Alu 1 108 -35 264 213 106 11 chr2 77596077 77596171 -173091683 + L1P LINE L1 5296 5398 -753 3158 122 95 0 chr2 77596245 77596727 -173091127 + MER1A DNA MER1_type 2 529 0 476 326 156 9 chr2 77596727 77597055 -173090799 + L1MC4a LINE L1 5498 5873 -1935 2244 98 34 0 chr2 77597235 77597355 -173090499 + AluSx SINE Alu 1 115 -197 261 0 0 0 chr2 77597355 77597384 -173090470 + (CA)n Simple_repeat Simple_repeat 2 30 0 2244 98 34 0 chr2 77597384 77597559 -173090295 + AluSx SINE Alu 115 306 -6 1578 138 58 10 chr2 77597610 77597744 -173090110 + L1M4 LINE L1 5186 5312 -872 2509 70 0 0 chr2 77597744 77598045 -173089809 + AluY SINE Alu 1 301 -10 1578 138 58 10 chr2 77598045 77598303 -173089551 + L1M4 LINE L1 5312 5755 -429 1525 74 0 15 chr2 77598333 77598535 -173089319 + AluSq SINE Alu 45 243 -70 695 110 0 0 chr2 77598536 77598636 -173089218 + AluSg/x SINE Alu 205 304 -8 28 71 0 0 chr2 77598920 77598976 -173088878 + AT_rich Low_complexity Low_complexity 1 56 0 22 35 0 0 chr2 77599889 77599918 -173087936 + GC_rich Low_complexity Low_complexity 1 29 0 286 165 15 135 chr2 77600414 77600508 -173087346 - L1MB7 LINE L1 0 6184 6109 1792 143 50 10 chr2 77600508 77600808 -173087046 - AluJo SINE Alu 0 312 1 286 165 15 135 chr2 77600808 77600846 -173087008 - L1MB7 LINE L1 -75 6109 6068 1170 132 12 0 chr2 77600847 77601014 -173086840 - AluSg/x SINE Alu -14 298 130 897 158 192 27 chr2 77601134 77601394 -173086460 + L1MC5 LINE L1 7611 7913 -48 2044 127 3 3 chr2 77601408 77601719 -173086135 + AluSx SINE Alu 1 311 0 2014 118 57 0 chr2 77602657 77602937 -173084917 + AluSx SINE Alu 1 296 -16 206 230 108 14 chr2 77603088 77603162 -173084692 + MIR SINE MIR 48 128 -80 2027 114 0 4 chr2 77603164 77603437 -173084417 - AluSx SINE Alu -8 304 33 2585 40 7 0 chr2 77603457 77603761 -173084093 + AluY SINE Alu 2 307 -4 2240 82 9 41 chr2 77603773 77604092 -173083762 + AluSc SINE Alu 1 309 0 608 186 0 0 chr2 77604103 77604205 -173083649 + FLAM_C SINE Alu 7 108 -35 264 227 128 11 chr2 77604507 77604684 -173083170 + L1MC4a LINE L1 5197 5398 -748 3139 124 95 0 chr2 77604758 77605240 -173082614 + MER1A DNA MER1_type 2 529 0 476 326 156 9 chr2 77605240 77605568 -173082286 + L1MC4a LINE L1 5498 5873 -1935 2235 98 34 0 chr2 77605748 77605868 -173081986 + AluSx SINE Alu 1 115 -197 369 0 0 0 chr2 77605868 77605909 -173081945 + (CA)n Simple_repeat Simple_repeat 2 42 0 2235 98 34 0 chr2 77605909 77606083 -173081771 + AluSx SINE Alu 115 305 -7 1578 138 58 10 chr2 77606133 77606267 -173081587 + L1M4 LINE L1 5186 5312 -872 2509 70 0 0 chr2 77606267 77606568 -173081286 + AluY SINE Alu 1 301 -10 1578 138 58 10 chr2 77606568 77606826 -173081028 + L1M4 LINE L1 5312 5755 -429 1525 74 0 15 chr2 77606856 77607058 -173080796 + AluSq SINE Alu 45 243 -70 695 110 0 0 chr2 77607059 77607159 -173080695 + AluSg/x SINE Alu 205 304 -8 28 71 0 0 chr2 77607443 77607499 -173080355 + AT_rich Low_complexity Low_complexity 1 56 0 200 225 0 0 chr2 77607619 77607659 -173080195 - MER5A DNA MER1_type 0 189 150 22 35 0 0 chr2 77608404 77608433 -173079421 + GC_rich Low_complexity Low_complexity 1 29 0 2507 139 5 93 chr2 77608928 77609022 -173078832 - L1MB7 LINE L1 0 6184 6083 1784 144 50 10 chr2 77609022 77609321 -173078533 - AluJo SINE Alu -1 311 1 2507 139 5 93 chr2 77609321 77609360 -173078494 - L1MB7 LINE L1 -101 6083 6042 2086 89 13 70 chr2 77609360 77609676 -173078178 - AluSx SINE Alu -14 298 1 2507 139 5 93 chr2 77609676 77609941 -173077913 - L1MB7 LINE L1 -142 6042 5845 2132 124 3 10 chr2 77609941 77610255 -173077599 + AluJb SINE Alu 1 312 0 2507 139 5 93 chr2 77610255 77610415 -173077439 - L1MB7 LINE L1 -339 5845 5673 33 0 0 0 chr2 77610734 77610767 -173077087 + AT_rich Low_complexity Low_complexity 1 33 0 1960 149 0 3 chr2 77610854 77611156 -173076698 + AluJb SINE Alu 1 301 -11 1513 131 0 0 chr2 77612006 77612228 -173075626 + AluJb SINE Alu 84 305 -7 2396 94 0 3 chr2 77612334 77612643 -173075211 + AluSx SINE Alu 1 308 -4 1045 144 12 17 chr2 77612643 77612816 -173075038 + AluSg/x SINE Alu 126 297 -15 2242 77 11 3 chr2 77612818 77613105 -173074749 + AluSp SINE Alu 1 289 -24 1324 100 0 0 chr2 77613121 77613291 -173074563 + AluSg/x SINE Alu 123 292 -20 345 148 0 0 chr2 77613292 77613346 -173074508 + HY4 scRNA scRNA 40 93 0 1630 151 54 18 chr2 77613378 77613657 -173074197 - AluJo SINE Alu -22 290 2 985 296 199 44 chr2 77613709 77614009 -173073845 - L2 LINE L2 -273 3040 2788 1729 180 17 0 chr2 77614009 77614298 -173073556 + AluJb SINE Alu 1 294 -18 985 296 199 44 chr2 77614298 77614753 -173073101 - L2 LINE L2 -525 2788 2405 323 60 20 0 chr2 77614753 77614803 -173073051 + (TA)n Simple_repeat Simple_repeat 1 51 0 1494 102 20 0 chr2 77614810 77615006 -173072848 - AluSg/x SINE Alu -30 282 83 2424 86 3 0 chr2 77615016 77615319 -173072535 - AluSg SINE Alu -6 304 1 985 296 199 44 chr2 77615319 77615448 -173072406 - L2 LINE L2 -920 2393 1990 2251 66 11 0 chr2 77615455 77615741 -173072113 + AluY SINE Alu 1 289 -22 2078 125 0 16 chr2 77665768 77666071 -173021783 - AluJb SINE Alu -14 298 1 2415 93 0 6 chr2 77666231 77666543 -173021311 - AluSg SINE Alu 0 310 1 1784 167 20 3 chr2 77668518 77668824 -173019030 - AluSx SINE Alu -1 311 1 505 237 30 15 chr2 77669525 77669656 -173018198 + MIR SINE MIR 28 160 -102 200 314 87 34 chr2 77670671 77670878 -173016976 + L2 LINE L2 1682 1899 -1415 26 0 0 0 chr2 77673314 77673340 -173014514 + AT_rich Low_complexity Low_complexity 1 26 0 2399 93 3 0 chr2 77673368 77673669 -173014185 + AluSx SINE Alu 1 302 -10 1066 228 20 28 chr2 77673710 77673965 -173013889 + MIR SINE MIR 10 262 0 1288 165 21 141 chr2 77674002 77674336 -173013518 - AluYb8 SINE Alu -14 294 1 478 305 17 11 chr2 77674708 77674882 -173012972 + MER5B DNA MER1_type 1 175 -3 189 224 138 0 chr2 77675365 77675423 -173012431 + MIR SINE MIR 57 122 -86 288 0 0 0 chr2 77675440 77675472 -173012382 + (TG)n Simple_repeat Simple_repeat 2 33 0 506 257 8 0 chr2 77676431 77676596 -173011258 + L1ME1 LINE L1 6007 6184 0 734 307 94 39 chr2 77676930 77677227 -173010627 + L1ME4a LINE L1 4548 4827 -1294 1973 144 27 0 chr2 77677227 77677519 -173010335 - AluJb SINE Alu -12 300 1 734 307 94 39 chr2 77677519 77678431 -173009423 + L1ME4a LINE L1 4827 5825 -296 1692 137 52 11 chr2 77678664 77678934 -173008920 + AluSx SINE Alu 1 281 -31 398 259 65 7 chr2 77678955 77679140 -173008714 + MIR SINE MIR 20 260 -2 803 274 143 18 chr2 77679361 77679817 -173008037 - L1ME4a LINE L1 -253 5868 5356 2028 113 46 0 chr2 77680161 77680320 -173007534 - AluSq SINE Alu -17 296 117 320 0 25 0 chr2 77680320 77680360 -173007494 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 2028 113 46 0 chr2 77680360 77680483 -173007371 - AluSq SINE Alu -196 117 1 412 162 0 15 chr2 77681274 77681342 -173006512 - MER5B DNA MER1_type 0 178 112 2313 57 0 0 chr2 77681342 77681647 -173006207 + AluY SINE Alu 1 305 0 539 226 247 0 chr2 77681981 77682127 -173005727 - MER5A DNA MER1_type 0 189 8 429 291 17 8 chr2 77682281 77682398 -173005456 + MER5B DNA MER1_type 1 118 -60 1492 166 69 0 chr2 77682766 77683043 -173004811 + AluJo SINE Alu 1 296 -16 732 174 38 89 chr2 77683044 77683280 -173004574 + L1MC5 LINE L1 7701 7924 -37 608 233 39 8 chr2 77683951 77684080 -173003774 + MER5B DNA MER1_type 1 133 -45 1250 108 0 6 chr2 77684832 77685008 -173002846 + AluSx SINE Alu 1 175 -137 655 235 7 0 chr2 77685011 77685147 -173002707 - MIR SINE MIR -35 227 91 806 124 0 0 chr2 77685147 77685260 -173002594 + AluSx SINE Alu 175 287 -23 966 230 60 20 chr2 77686654 77686902 -173000952 - MIR SINE MIR -1 261 4 426 254 26 9 chr2 77686958 77687072 -173000782 + MER58B DNA MER1_type 3 118 -223 217 180 16 16 chr2 77687078 77687139 -173000715 + GA-rich Low_complexity Low_complexity 3 63 0 318 220 3 12 chr2 77687144 77687230 -173000624 + MER58B DNA MER1_type 128 341 0 2119 107 3 10 chr2 77688218 77688528 -172999326 + AluSx SINE Alu 1 308 -4 280 275 122 70 chr2 77688610 77688995 -172998859 + L1MC5 LINE L1 7521 7925 -36 958 313 153 36 chr2 77689986 77691460 -172996394 + L2 LINE L2 1598 3271 -1 2290 87 0 7 chr2 77691636 77691935 -172995919 - AluSq SINE Alu -14 299 3 428 326 33 6 chr2 77694144 77694325 -172993529 + MIR SINE MIR 35 220 -42 677 200 7 32 chr2 77694658 77694789 -172993065 + MER106B DNA MER1_type 2 135 -924 1682 155 7 39 chr2 77694789 77695098 -172992756 - AluJo SINE Alu -13 299 1 677 200 7 32 chr2 77695098 77695109 -172992745 + MER106B DNA MER1_type 135 142 -917 2785 9 0 12 chr2 77695109 77695430 -172992424 - AluYb8 SINE Alu -1 317 1 677 200 7 32 chr2 77695430 77695441 -172992413 + MER106B DNA MER1_type 142 152 -907 222 152 0 22 chr2 77695452 77695498 -172992356 + (TTAAA)n Simple_repeat Simple_repeat 3 47 0 1010 197 0 22 chr2 77695993 77696216 -172991638 + AluJo SINE Alu 82 299 -13 1150 208 30 9 chr2 77696227 77696458 -172991396 - MER8 DNA MER2_type 0 239 4 264 246 0 16 chr2 77697452 77697513 -172990341 + CT-rich Low_complexity Low_complexity 4 63 0 611 259 278 19 chr2 77697517 77697887 -172989967 - L2 LINE L2 -25 3288 2823 191 307 11 23 chr2 77697899 77697987 -172989867 + L2 LINE L2 2411 2497 -817 202 354 100 10 chr2 77698698 77698989 -172988865 + L2 LINE L2 1565 1881 -1433 826 262 73 8 chr2 77698996 77699244 -172988610 + Charlie8 DNA MER1_type 1 264 -2153 642 332 102 27 chr2 77699452 77700111 -172987743 + L2 LINE L2 2015 2722 -592 1819 174 0 0 chr2 77700262 77700567 -172987287 - AluJb SINE Alu -7 305 1 21 0 0 0 chr2 77700819 77700840 -172987014 + AT_rich Low_complexity Low_complexity 1 21 0 314 341 97 23 chr2 77700840 77701098 -172986756 + L2 LINE L2 2701 2977 -337 207 290 21 32 chr2 77701345 77701438 -172986416 + GA-rich Low_complexity Low_complexity 1 92 0 534 87 29 0 chr2 77701538 77701641 -172986213 + (GA)n Simple_repeat Simple_repeat 1 106 0 421 266 0 0 chr2 77702341 77702435 -172985419 - MIR3 SINE MIR -1 207 114 770 178 0 7 chr2 77702584 77702719 -172985135 - FLAM_C SINE Alu -8 135 2 659 239 53 49 chr2 77702948 77703174 -172984680 + MIR SINE MIR 36 262 0 282 316 97 18 chr2 77703816 77703930 -172983924 + L2 LINE L2 3150 3272 0 1896 124 27 10 chr2 77705622 77705921 -172981933 - AluSx SINE Alu -8 304 1 2113 128 0 0 chr2 77706302 77706614 -172981240 + AluSx SINE Alu 1 312 0 229 79 0 53 chr2 77706803 77706841 -172981013 - L1M3e LINE L1 -6597 433 398 204 200 55 0 chr2 77707285 77707340 -172980514 + CT-rich Low_complexity Low_complexity 3 60 0 2046 88 9 82 chr2 77707431 77707761 -172980093 + AluSx SINE Alu 1 306 -6 216 315 0 54 chr2 77708190 77708282 -172979572 - MIR SINE MIR -6 256 170 442 212 0 71 chr2 77708301 77708400 -172979454 - MER81 DNA DNA -21 93 2 336 299 107 3 chr2 77708925 77709098 -172978756 + MIR SINE MIR 4 192 -62 5725 138 51 32 chr2 77709109 77709715 -172978139 + L1MA9 LINE L1 4726 5319 -993 631 203 42 0 chr2 77709715 77709833 -172978021 + FLAM_A SINE Alu 1 123 -10 5725 138 51 32 chr2 77709833 77709873 -172977981 + L1MA9 LINE L1 5319 5357 -955 2608 103 8 16 chr2 77709873 77710020 -172977834 + THE1B LTR MaLR 1 148 -216 2212 98 0 0 chr2 77710020 77710316 -172977538 + AluSp SINE Alu 2 297 -16 2608 103 8 16 chr2 77710316 77710535 -172977319 + THE1B LTR MaLR 148 364 0 5725 138 51 32 chr2 77710535 77711442 -172976412 + L1MA9 LINE L1 5357 6311 -1 255 315 22 11 chr2 77711474 77711563 -172976291 + L2 LINE L2 2970 3059 -213 2121 108 0 0 chr2 77713285 77713572 -172974282 + AluSx SINE Alu 1 287 -25 610 124 16 0 chr2 77713967 77714088 -172973766 + (TG)n Simple_repeat Simple_repeat 2 124 0 2686 7 0 0 chr2 77714802 77715099 -172972755 - AluYa5 SINE Alu -14 297 1 2390 154 35 50 chr2 77716295 77716663 -172971191 - L1MC2 LINE L1 0 6624 6252 2283 100 0 3 chr2 77716663 77716974 -172970880 - AluSg SINE Alu 0 310 1 2390 154 35 50 chr2 77716974 77717039 -172970815 - L1MC2 LINE L1 -372 6252 6188 3189 95 52 7 chr2 77717039 77717504 -172970350 + LTR19A LTR ERV1 1 486 0 2390 154 35 50 chr2 77717504 77717608 -172970246 - L1MC2 LINE L1 -436 6188 6094 12206 214 24 28 chr2 77719002 77719869 -172967985 - L1MC2 LINE L1 -512 6112 5243 1731 163 7 20 chr2 77719869 77720169 -172967685 - AluJo SINE Alu -16 296 1 12206 214 24 28 chr2 77720169 77720607 -172967247 - L1MC2 LINE L1 -1381 5243 4805 2277 69 0 23 chr2 77720607 77720912 -172966942 - AluY SINE Alu -13 298 1 12206 214 24 28 chr2 77720912 77723180 -172964674 - L1MC2 LINE L1 -1819 4805 2529 348 83 0 0 chr2 77723180 77723228 -172964626 + (TG)n Simple_repeat Simple_repeat 1 48 0 12206 214 24 28 chr2 77723228 77723251 -172964603 - L1MC2 LINE L1 -4095 2529 2507 1453 148 4 0 chr2 77723251 77723480 -172964374 - AluSx SINE Alu -82 230 1 12206 214 24 28 chr2 77723480 77723601 -172964253 - L1MC2 LINE L1 -4117 2507 2387 1881 155 3 0 chr2 77723601 77723898 -172963956 + AluSx SINE Alu 1 298 -14 12206 214 24 28 chr2 77723898 77724001 -172963853 - L1MC2 LINE L1 -4237 2387 2285 818 188 0 0 chr2 77724001 77724134 -172963720 - FLAM_A SINE Alu 0 133 1 12206 214 24 28 chr2 77724134 77724299 -172963555 - L1MC2 LINE L1 -4339 2285 2147 241 267 149 31 chr2 77724822 77725017 -172962837 + MIR SINE MIR 20 237 -25 325 229 221 28 chr2 77725991 77726110 -172961744 + L1M4 LINE L1 2464 2559 -3587 2053 137 0 0 chr2 77726110 77726416 -172961438 + AluSx SINE Alu 3 308 -4 325 229 221 28 chr2 77726416 77726545 -172961309 + L1M4 LINE L1 2559 2760 -3386 27 29 0 0 chr2 77726552 77726586 -172961268 + AT_rich Low_complexity Low_complexity 1 34 0 816 184 18 24 chr2 77726600 77726768 -172961086 + FRAM SINE Alu 1 167 -9 624 208 110 0 chr2 77726891 77727045 -172960809 - MIR SINE MIR 0 262 92 230 191 0 0 chr2 77727215 77727257 -172960597 + L1MC5 LINE L1 7816 7857 -104 243 0 0 0 chr2 77727272 77727299 -172960555 + (A)n Simple_repeat Simple_repeat 1 27 0 5898 141 10 3 chr2 77727303 77728220 -172959634 + MER49 LTR ERV1 1 923 0 342 272 177 65 chr2 77728431 77728725 -172959129 + HAL1 LINE L1 326 652 -1855 290 247 180 50 chr2 77728733 77728972 -172958882 + HAL1 LINE L1 699 968 -1539 5623 114 21 23 chr2 77728977 77729353 -172958501 + L1PB4 LINE L1 5109 5484 -672 2069 105 10 3 chr2 77729353 77729649 -172958205 + AluSx SINE Alu 1 298 -14 5623 114 21 23 chr2 77729649 77730310 -172957544 + L1PB4 LINE L1 5484 6144 -12 424 176 54 0 chr2 77730349 77730423 -172957431 + U6 snRNA snRNA 1 78 -29 874 102 44 29 chr2 77730466 77730603 -172957251 - MER73 LTR ERVL 0 644 506 1381 162 90 19 chr2 77730609 77730875 -172956979 - MER73 LTR ERVL -344 300 16 2643 234 73 41 chr2 77730875 77731822 -172956032 + HAL1 LINE L1 985 1961 -546 415 167 71 0 chr2 77731849 77731933 -172955921 + HAL1 LINE L1 2075 2164 -343 619 108 77 23 chr2 77732365 77732495 -172955359 + MER53 DNA DNA 1 137 -52 262 213 16 16 chr2 77732592 77732653 -172955201 - MLT1L LTR MaLR -554 61 1 1154 277 88 41 chr2 77732653 77733219 -172954635 + MLT1L LTR MaLR 23 615 0 430 296 99 0 chr2 77733220 77733362 -172954492 + L1ME3A LINE L1 5793 5948 -222 25 31 0 0 chr2 77733607 77733639 -172954215 + AT_rich Low_complexity Low_complexity 1 32 0 1064 262 111 51 chr2 77733639 77733907 -172953947 + HAL1 LINE L1 1285 1535 -972 2063 123 3 3 chr2 77733907 77734208 -172953646 + AluSx SINE Alu 1 301 -11 1064 262 111 51 chr2 77734208 77734489 -172953365 + HAL1 LINE L1 1535 1867 -640 304 230 15 82 chr2 77734865 77735000 -172952854 + HAL1 LINE L1 2353 2478 -29 324 89 22 0 chr2 77735164 77735209 -172952645 - MER5A DNA MER1_type 0 189 144 817 176 0 0 chr2 77735211 77735353 -172952501 - FRAM SINE Alu -12 164 23 834 196 27 0 chr2 77735366 77735514 -172952340 - MER5A DNA MER1_type -36 153 2 22 0 0 0 chr2 77735534 77735556 -172952298 + AT_rich Low_complexity Low_complexity 1 22 0 491 271 118 26 chr2 77735690 77736078 -172951776 + MLT1K LTR MaLR 129 585 -3 513 267 88 24 chr2 77736564 77736778 -172951076 - MIR SINE MIR -8 254 30 396 113 0 78 chr2 77736796 77736911 -172950943 + (GGGAA)n Simple_repeat Simple_repeat 2 107 0 27 0 0 0 chr2 77737086 77737113 -172950741 + AT_rich Low_complexity Low_complexity 1 27 0 1815 104 0 0 chr2 77737489 77737738 -172950116 + AluSg SINE Alu 1 249 -61 294 241 89 25 chr2 77737981 77738060 -172949794 - L2 LINE L2 -4 3309 3226 368 250 26 69 chr2 77739488 77739604 -172948250 - MIR3 SINE MIR -16 192 82 2059 100 4 0 chr2 77740258 77740568 -172947286 + AluSx SINE Alu 1 311 0 215 213 38 66 chr2 77740882 77741065 -172946789 + (AGGTG)n Simple_repeat Simple_repeat 1 178 0 * 220 241 38 30 chr2 77740955 77741088 -172946766 + (GTGTG)n Simple_repeat Simple_repeat 5 138 0 * 241 214 17 87 chr2 77741047 77741220 -172946634 + (ATGGTG)n Simple_repeat Simple_repeat 6 166 0 297 185 45 45 chr2 77741235 77741413 -172946441 + (GTGTG)n Simple_repeat Simple_repeat 3 180 0 284 275 35 12 chr2 77741420 77741591 -172946263 + (TGG)n Simple_repeat Simple_repeat 2 176 0 240 139 72 60 chr2 77741508 77741674 -172946180 + (AGGTG)n Simple_repeat Simple_repeat 2 169 0 * 265 182 42 49 chr2 77741789 77741932 -172945922 + (GTGTG)n Simple_repeat Simple_repeat 4 145 0 * 285 268 29 29 chr2 77741895 77742325 -172945529 + (TGG)n Simple_repeat Simple_repeat 1 430 0 205 208 286 0 chr2 77742523 77742600 -172945254 + MIR SINE MIR 32 130 -78 234 271 0 17 chr2 77743188 77743247 -172944607 + MIR3 SINE MIR 147 204 -4 291 114 0 0 chr2 77743654 77743698 -172944156 + (TG)n Simple_repeat Simple_repeat 1 44 0 781 187 68 68 chr2 77744015 77744234 -172943620 + MER20 DNA MER1_type 1 219 0 1102 209 128 3 chr2 77744350 77744656 -172943198 - MER2 DNA MER2_type 0 344 1 972 255 172 11 chr2 77745270 77745631 -172942223 + L2 LINE L2 2859 3277 -36 432 262 171 18 chr2 77745633 77745797 -172942057 + MIR SINE MIR 45 233 -29 23 0 0 0 chr2 77745815 77745838 -172942016 + AT_rich Low_complexity Low_complexity 1 23 0 388 185 49 0 chr2 77746056 77746137 -172941717 - MIR SINE MIR -92 170 86 310 369 19 13 chr2 77746626 77746783 -172941071 + L1MC4a LINE L1 4337 4494 -1652 399 247 0 0 chr2 77746918 77747007 -172940847 - MIR SINE MIR -13 249 161 1830 148 3 10 chr2 77747014 77747319 -172940535 - AluJb SINE Alu -9 303 1 633 224 61 0 chr2 77747381 77747528 -172940326 + MIR SINE MIR 86 241 -21 494 217 21 63 chr2 77747528 77747671 -172940183 - MIR SINE MIR -99 163 27 452 274 8 0 chr2 77748706 77748823 -172939031 - MER94 DNA DNA -15 119 2 196 335 24 53 chr2 77749039 77749209 -172938645 - L2 LINE L2 -2429 885 721 439 289 74 26 chr2 77749296 77749486 -172938368 + L1MC4a LINE L1 5414 5612 -2196 1908 138 23 7 chr2 77749487 77749791 -172938063 + AluSx SINE Alu 1 309 -3 390 265 49 0 chr2 77749902 77750004 -172937850 + MIR SINE MIR 155 261 -1 381 239 16 98 chr2 77750010 77750194 -172937660 + L1MC4a LINE L1 5704 5872 -1936 1302 78 0 0 chr2 77750194 77750360 -172937494 + L1PA11 LINE L1 6007 6172 -2 21 36 0 0 chr2 77750367 77750395 -172937459 + AT_rich Low_complexity Low_complexity 1 28 0 3139 140 30 9 chr2 77750631 77751167 -172936687 + L1MB3 LINE L1 5628 6174 -9 2199 100 3 3 chr2 77751973 77752274 -172935580 + AluSx SINE Alu 1 301 -11 327 288 42 42 chr2 77752419 77752537 -172935317 + L2 LINE L2 3151 3268 -4 254 257 129 20 chr2 77752625 77752726 -172935128 + HUERS-P1 LTR ERV1 456 567 -5696 402 287 10 0 chr2 77755539 77755640 -172932214 - MER81 DNA DNA 0 114 13 224 125 0 54 chr2 77756895 77756951 -172930903 + (T)n Simple_repeat Simple_repeat 1 53 0 2008 131 0 3 chr2 77757150 77757471 -172930383 - AluSx SINE Alu 0 312 1 826 153 0 0 chr2 77757518 77757649 -172930205 - FRAM SINE Alu -8 168 38 421 269 90 112 chr2 77757747 77758015 -172929839 - L1M4 LINE L1 -990 5156 4895 435 262 36 2 chr2 77758367 77758510 -172929344 - L1M4 LINE L1 -491 5683 5526 545 253 67 32 chr2 77758910 77759150 -172928704 + L1ME LINE L1 5518 5769 -401 2131 99 3 7 chr2 77759339 77759641 -172928213 + AluSg SINE Alu 1 301 -9 24 0 0 0 chr2 77759735 77759759 -172928095 + AT_rich Low_complexity Low_complexity 1 24 0 319 254 56 0 chr2 77760581 77760652 -172927202 - MER5A DNA MER1_type -98 91 17 477 188 161 13 chr2 77760654 77760803 -172927051 + L1MC5 LINE L1 7330 7500 -461 379 200 14 0 chr2 77760807 77760877 -172926977 + FAM SINE Alu 104 174 -1 908 199 36 0 chr2 77761468 77761634 -172926220 + FAM SINE Alu 1 172 -3 213 39 0 0 chr2 77761634 77761660 -172926194 + (ATG)n Simple_repeat Simple_repeat 3 28 0 2292 98 0 0 chr2 77762953 77763260 -172924594 - AluY SINE Alu -4 307 1 1703 153 10 23 chr2 77763268 77763576 -172924278 - AluSx SINE Alu -8 304 1 2194 83 0 7 chr2 77764021 77764321 -172923533 - AluY SINE Alu -13 298 1 2080 136 24 30 chr2 77765383 77765722 -172922132 - MER1B DNA MER1_type 0 337 1 2340 97 0 0 chr2 77765926 77766236 -172921618 - AluSg SINE Alu 0 310 1 754 200 136 67 chr2 77766574 77766964 -172920890 + L1MC5 LINE L1 7512 7928 -33 2421 59 3 3 chr2 77767689 77767993 -172919861 - AluSc SINE Alu -5 304 1 331 257 83 9 chr2 77768185 77768294 -172919560 - MIR SINE MIR -96 166 50 185 286 175 8 chr2 77768662 77768788 -172919066 + L2 LINE L2 1820 1966 -1348 464 270 20 54 chr2 77769453 77769657 -172918197 + L2 LINE L2 2182 2378 -936 491 256 98 18 chr2 77769822 77769986 -172917868 - MIR SINE MIR -27 235 59 180 386 9 26 chr2 77770253 77770367 -172917487 - L2 LINE L2 -474 2840 2729 466 340 201 19 chr2 77770384 77770802 -172917052 - L2 LINE L2 -560 2754 2261 538 147 233 0 chr2 77771051 77771180 -172916674 + MER105 DNA DNA 2 160 -44 271 270 70 52 chr2 77771518 77771633 -172916221 - MER5A DNA MER1_type -36 153 37 229 271 24 59 chr2 77771566 77771651 -172916203 + MER5A DNA MER1_type 101 182 -7 * 372 297 182 18 chr2 77779327 77779657 -172908197 + L2 LINE L2 2921 3304 -9 2221 86 7 10 chr2 77780485 77780787 -172907067 + AluSc SINE Alu 1 301 -8 304 306 24 18 chr2 77782766 77782936 -172904918 + GA-rich Low_complexity Low_complexity 2 172 0 316 235 15 0 chr2 77791995 77792063 -172895791 + L1ME4a LINE L1 6047 6115 -6 932 286 50 0 chr2 77792597 77792838 -172895016 + MIR SINE MIR 5 257 -5 290 319 60 26 chr2 77792903 77793019 -172894835 - MIR SINE MIR -129 133 14 2063 136 20 3 chr2 77793268 77793563 -172894291 + AluSx SINE Alu 1 300 -12 2853 22 0 9 chr2 77793741 77794062 -172893792 + AluYb8 SINE Alu 1 318 0 532 252 116 0 chr2 77794714 77794869 -172892985 + MIR SINE MIR 89 261 -1 232 250 0 0 chr2 77794935 77794983 -172892871 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 348 239 42 56 chr2 77795132 77795274 -172892580 - MIR SINE MIR -58 204 65 710 218 51 0 chr2 77797269 77797425 -172890429 + MIR SINE MIR 99 262 0 641 293 209 55 chr2 77797551 77798852 -172889002 + L2 LINE L2 1318 2819 -495 1548 162 32 67 chr2 77798854 77799169 -172888685 + AluSx SINE Alu 1 304 -8 939 149 25 12 chr2 77799191 77799352 -172888502 + FAM SINE Alu 1 46 -3 464 323 95 49 chr2 77799476 77799739 -172888115 + L2 LINE L2 2995 3269 -3 311 310 103 26 chr2 77800622 77800777 -172887077 + MIR SINE MIR 66 232 -30 501 303 76 49 chr2 77801172 77801476 -172886378 + L3 LINE CR1 1221 1532 -45 332 274 207 12 chr2 77801472 77801636 -172886218 - MIR3 SINE MIR -6 202 7 * 449 111 0 0 chr2 77801633 77801696 -172886158 + MER5A DNA MER1_type 9 71 -118 325 223 21 32 chr2 77801877 77801971 -172885883 - MER103 DNA DNA -16 150 58 206 344 122 22 chr2 77802219 77802309 -172885545 + L3b LINE CR1 1461 1559 -24 250 329 14 21 chr2 77803148 77803288 -172884566 + L1ME LINE L1 5414 5552 -614 1787 148 0 60 chr2 77803334 77803651 -172884203 - AluJb SINE Alu -11 301 4 699 221 35 35 chr2 77803651 77803823 -172884031 + MIR SINE MIR 47 218 -44 893 248 150 30 chr2 77803979 77804507 -172883347 - L1MC4a LINE L1 -1635 6173 5583 885 119 49 0 chr2 77804580 77804723 -172883131 - L1MB3 LINE L1 -2 6181 6032 984 126 80 0 chr2 77804827 77805002 -172882852 - MER2 DNA MER2_type -25 320 132 2427 127 8 0 chr2 77805003 77805372 -172882482 - MER1A DNA MER1_type -1 528 157 502 191 183 0 chr2 77805376 77805491 -172882363 - MER2 DNA MER2_type -209 136 1 1618 113 21 21 chr2 77805541 77805779 -172882075 + AluSx SINE Alu 61 298 -14 1596 175 25 15 chr2 77806447 77806721 -172881133 - AluJb SINE Alu -23 289 13 316 134 12 37 chr2 77806733 77806815 -172881039 - Charlie5 DNA MER1_type -6 2606 2527 1422 174 0 0 chr2 77806815 77807027 -172880827 - AluJb SINE Alu -17 295 84 1217 151 35 61 chr2 77807027 77807258 -172880596 - Charlie5 DNA MER1_type -90 2534 2299 273 119 0 0 chr2 77807258 77807300 -172880554 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 637 214 17 0 chr2 77807301 77807418 -172880436 - FLAM_C SINE Alu -14 119 1 1217 151 35 61 chr2 77807418 77807495 -172880359 - Charlie5 DNA MER1_type -324 2300 2232 693 164 0 8 chr2 77807505 77807633 -172880221 - MER3 DNA MER1_type -41 168 42 540 275 79 83 chr2 77808071 77808250 -172879604 + L1M4 LINE L1 4062 4240 -1906 2291 106 0 13 chr2 77808250 77808551 -172879303 + AluSx SINE Alu 1 297 -15 540 275 79 83 chr2 77808551 77808732 -172879122 + L1M4 LINE L1 4240 4420 -1726 2354 93 0 0 chr2 77808732 77809021 -172878833 + AluSg SINE Alu 1 289 -21 2310 90 24 0 chr2 77809029 77809318 -172878536 + AluSx SINE Alu 1 296 -16 540 275 79 83 chr2 77809318 77809391 -172878463 + L1M4 LINE L1 4427 4499 -1647 1881 144 25 0 chr2 77809391 77809669 -172878185 + AluSx SINE Alu 12 296 -16 540 275 79 83 chr2 77809669 77809885 -172877969 + L1M4 LINE L1 4499 4714 -1432 1668 75 5 0 chr2 77809885 77810086 -172877768 + AluY SINE Alu 91 292 -19 540 275 79 83 chr2 77810086 77810211 -172877643 + L1M4 LINE L1 4714 4846 -1300 1632 190 13 29 chr2 77810211 77810521 -172877333 - AluJo SINE Alu -7 305 1 540 275 79 83 chr2 77810521 77810621 -172877233 + L1M4 LINE L1 4846 4945 -1201 183 259 0 0 chr2 77810623 77810681 -172877173 + GA-rich Low_complexity Low_complexity 3 60 0 228 289 22 22 chr2 77810692 77810782 -172877072 + L1MEd LINE L1 5 94 -6025 2529 146 16 12 chr2 77810835 77811261 -172876593 + LTR42 LTR ERVL 68 495 0 279 71 0 0 chr2 77811263 77811305 -172876549 + (CA)n Simple_repeat Simple_repeat 1 42 0 712 205 8 0 chr2 77811483 77811600 -172876254 + FLAM_C SINE Alu 2 119 -24 198 0 0 0 chr2 77811833 77811855 -172875999 + (TA)n Simple_repeat Simple_repeat 2 23 0 731 317 81 71 chr2 77811867 77812238 -172875616 + L1MEd LINE L1 537 916 -5203 2305 113 0 0 chr2 77812238 77812530 -172875324 + AluSq SINE Alu 1 292 -21 731 317 81 71 chr2 77812530 77812638 -172875216 + L1MEd LINE L1 916 1021 -5098 301 255 0 10 chr2 77812741 77812839 -172875015 + L1MEd LINE L1 1052 1148 -4971 1081 164 0 0 chr2 77812848 77813013 -172874841 + FRAM SINE Alu 2 166 -10 762 246 30 154 chr2 77813049 77813385 -172874469 + L1MEd LINE L1 1172 1548 -4762 2358 82 0 0 chr2 77813385 77813667 -172874187 + AluSq SINE Alu 11 292 -21 2315 60 50 3 chr2 77813667 77813965 -172873889 + AluSp SINE Alu 1 313 0 762 246 30 154 chr2 77813965 77814013 -172873841 + L1MEd LINE L1 1547 1486 -4824 2306 54 11 0 chr2 77814013 77814132 -172873722 + AluY SINE Alu 1 117 -199 183 42 0 0 chr2 77814132 77814156 -172873698 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2306 54 11 0 chr2 77814156 77814349 -172873505 + AluY SINE Alu 117 316 0 762 246 30 154 chr2 77814349 77814461 -172873393 + L1MEd LINE L1 1485 1609 -4701 315 169 17 0 chr2 77814461 77814520 -172873334 - MLT1E1 LTR MaLR 0 624 565 773 172 8 15 chr2 77814522 77814656 -172873198 + AluJo SINE Alu 1 133 -169 983 151 11 38 chr2 77814686 77814872 -172872982 + AluJo SINE Alu 118 298 -14 2590 194 92 4 chr2 77814884 77815440 -172872414 - MLT1E1 LTR MaLR -49 605 1 1939 147 7 0 chr2 77815475 77815754 -172872100 - AluJb SINE Alu -31 281 1 323 284 146 59 chr2 77815756 77815913 -172871941 + L1MEd LINE L1 1617 1759 -4551 2230 80 10 40 chr2 77815913 77816237 -172871617 + AluSp SINE Alu 1 315 0 323 284 146 59 chr2 77816237 77816399 -172871455 + L1MEd LINE L1 1759 1965 -4345 1376 64 0 17 chr2 77816399 77816572 -172871282 + AluSg/x SINE Alu 127 296 -14 390 288 55 0 chr2 77816670 77816816 -172871038 + L1MEd LINE L1 3684 3837 -2292 546 262 185 24 chr2 77816821 77816978 -172870876 + L1MEd LINE L1 4135 4265 -1864 3904 104 45 0 chr2 77816978 77817554 -172870300 + LTR43 LTR ERV1 1 602 0 546 262 185 24 chr2 77817554 77817794 -172870060 + L1MEd LINE L1 4265 4616 -1513 432 0 0 0 chr2 77817794 77817842 -172870012 + (TG)n Simple_repeat Simple_repeat 1 48 0 546 262 185 24 chr2 77817842 77817897 -172869957 + L1MEd LINE L1 4616 4661 -1468 1888 168 0 10 chr2 77818273 77818582 -172869272 - AluJb SINE Alu -6 306 1 339 320 0 0 chr2 77820230 77820308 -172867546 - L2 LINE L2 0 3272 3195 22 0 0 0 chr2 77820410 77820432 -172867422 + AT_rich Low_complexity Low_complexity 1 22 0 1818 131 58 76 chr2 77820510 77820716 -172867138 - THE1C LTR MaLR 0 375 178 2622 51 0 16 chr2 77820716 77821032 -172866822 - AluY SINE Alu 0 311 1 1818 131 58 76 chr2 77821032 77821207 -172866647 - THE1C LTR MaLR -197 178 1 2186 99 0 49 chr2 77821232 77821556 -172866298 + AluSq SINE Alu 1 308 -5 29 28 0 0 chr2 77821712 77821748 -172866106 + AT_rich Low_complexity Low_complexity 1 36 0 451 317 50 77 chr2 77821867 77822167 -172865687 - L2 LINE L2 -110 3162 2871 2440 94 3 0 chr2 77822221 77822519 -172865335 - AluSp SINE Alu -14 299 1 27 0 0 0 chr2 77823030 77823057 -172864797 + AT_rich Low_complexity Low_complexity 1 27 0 290 241 25 13 chr2 77824620 77824699 -172863155 + MER96 DNA MER1_type? 1 80 -95 998 88 0 0 chr2 77827410 77827546 -172860308 + AluSc SINE Alu 174 309 0 333 213 0 32 chr2 77828939 77829033 -172858821 + G-rich Low_complexity Low_complexity 6 96 0 235 313 0 62 chr2 77829691 77829771 -172858083 - MIR SINE MIR -159 103 29 2492 86 0 6 chr2 77829849 77830163 -172857691 + AluSx SINE Alu 1 312 0 632 192 0 0 chr2 77830180 77830284 -172857570 + FLAM_A SINE Alu 1 104 -38 539 268 50 53 chr2 77830483 77830713 -172857141 + L1ME4a LINE L1 5581 5811 -310 1919 105 91 11 chr2 77830713 77830999 -172856855 - AluSx SINE Alu -3 309 1 539 268 50 53 chr2 77830999 77831108 -172856746 + L1ME4a LINE L1 5811 5919 -202 2303 87 10 7 chr2 77831723 77832032 -172855822 - AluSx SINE Alu -2 310 1 2345 79 16 10 chr2 77833464 77833769 -172854085 + AluSx SINE Alu 2 308 -4 425 214 56 16 chr2 77834067 77834193 -172853661 + MIR SINE MIR 66 196 -66 363 278 22 0 chr2 77834974 77835064 -172852790 + MIR SINE MIR 33 124 -84 265 200 18 0 chr2 77835144 77835199 -172852655 + MIR3 SINE MIR 135 190 -18 250 321 143 42 chr2 77835207 77835444 -172852410 + L2 LINE L2 2977 3237 -35 256 314 68 23 chr2 77835465 77835640 -172852214 + MIR SINE MIR 34 212 -50 583 297 86 5 chr2 77840022 77840244 -172847610 - MIR SINE MIR -2 260 21 1008 87 0 0 chr2 77840393 77840520 -172847334 + FLAM_C SINE Alu 1 127 -6 185 239 43 0 chr2 77843750 77843796 -172844058 + MER5B DNA MER1_type 1 48 -130 615 107 0 0 chr2 77843820 77843904 -172843950 + FLAM_A SINE Alu 40 123 -19 2375 58 0 0 chr2 77843912 77844207 -172843647 + AluY SINE Alu 1 295 -16 610 314 62 37 chr2 77844242 77844442 -172843412 + L1MC4a LINE L1 5515 5709 -2099 2378 57 0 17 chr2 77844442 77844743 -172843111 - AluY SINE Alu -15 296 1 610 314 62 37 chr2 77844743 77844946 -172842908 + L1MC4a LINE L1 5709 5928 -1880 213 178 0 0 chr2 77844946 77844991 -172842863 + (TA)n Simple_repeat Simple_repeat 2 46 0 2066 107 3 17 chr2 77845059 77845221 -172842633 - AluSx SINE Alu -18 294 136 2265 100 3 0 chr2 77845221 77845530 -172842324 - AluSx SINE Alu -2 310 1 2066 107 3 17 chr2 77845530 77845665 -172842189 - AluSx SINE Alu -176 136 1 434 252 108 7 chr2 77845721 77845860 -172841994 + MER5B DNA MER1_type 24 176 -2 504 250 91 0 chr2 77846212 77846344 -172841510 + MIR SINE MIR 92 235 -27 183 228 70 0 chr2 77848128 77848185 -172839669 + MIR SINE MIR 132 192 -70 542 143 335 37 chr2 77848521 77848682 -172839172 + MER3 DNA MER1_type 1 209 0 358 261 30 104 chr2 77848918 77849052 -172838802 + MER117 DNA MER1_type 74 197 0 895 270 154 50 chr2 77849127 77849945 -172837909 + L2 LINE L2 2386 3307 -6 732 168 72 0 chr2 77849957 77850082 -172837772 + FLAM_C SINE Alu 6 139 -4 613 255 25 56 chr2 77853401 77853597 -172834257 + MIR SINE MIR 57 246 -16 2072 110 0 0 chr2 77853615 77853907 -172833947 + AluSp SINE Alu 1 292 -21 1309 153 169 8 chr2 77853908 77854029 -172833825 + AluJb SINE Alu 1 101 -201 240 35 0 0 chr2 77854029 77854058 -172833796 + (CA)n Simple_repeat Simple_repeat 2 30 0 1309 153 169 8 chr2 77854058 77854185 -172833669 + AluJb SINE Alu 101 289 -13 2049 115 10 13 chr2 77854204 77854534 -172833320 - AluSx SINE Alu 0 312 1 389 260 20 30 chr2 77854534 77854635 -172833219 + L1MC4 LINE L1 6548 6702 -1139 2212 61 0 4 chr2 77854723 77855032 -172832822 + AluY SINE Alu 2 309 0 893 266 85 105 chr2 77855271 77855823 -172832031 - MLT1K LTR MaLR -36 552 12 267 243 213 37 chr2 77855961 77856097 -172831757 + L2 LINE L2 3153 3312 -1 207 24 49 24 chr2 77856482 77856523 -172831331 + (TTATA)n Simple_repeat Simple_repeat 5 46 0 1411 159 48 4 chr2 77856526 77856777 -172831077 - AluJo SINE Alu -41 271 10 2284 91 0 0 chr2 77856947 77857254 -172830600 - AluSg SINE Alu -3 307 1 22 56 0 0 chr2 77857258 77857294 -172830560 + AT_rich Low_complexity Low_complexity 1 36 0 1547 180 62 74 chr2 77857443 77857538 -172830316 - MER63B DNA MER1_type -633 429 334 1781 115 93 0 chr2 77857538 77857807 -172830047 + AluSg SINE Alu 1 294 -16 2130 96 10 0 chr2 77857816 77858108 -172829746 + AluSq SINE Alu 1 295 -18 1547 180 62 74 chr2 77858108 77858436 -172829418 - MER63B DNA MER1_type -736 326 1 2105 118 0 7 chr2 77859030 77859327 -172828527 + AluSx SINE Alu 7 301 -11 2136 106 0 10 chr2 77859327 77859620 -172828234 + AluSc SINE Alu 1 290 -19 778 170 95 27 chr2 77859628 77859775 -172828079 + FRAM SINE Alu 1 152 -24 2950 202 49 70 chr2 77859775 77860233 -172827621 + L1MC4 LINE L1 6990 7456 -586 1032 98 0 0 chr2 77860233 77860366 -172827488 + FLAM_C SINE Alu 1 133 0 2950 202 49 70 chr2 77860366 77860418 -172827436 + L1MC4 LINE L1 7456 7508 -534 1831 151 3 3 chr2 77860418 77860702 -172827152 + AluSx SINE Alu 1 284 -28 2950 202 49 70 chr2 77860702 77860925 -172826929 + L1MC4 LINE L1 7508 7734 -308 2000 88 67 0 chr2 77860925 77861209 -172826645 + AluSp SINE Alu 1 303 -10 2082 131 0 0 chr2 77861212 77861510 -172826344 + AluSg1 SINE Alu 1 298 -11 2950 202 49 70 chr2 77861510 77861701 -172826153 + L1MC4 LINE L1 7736 7901 -141 2655 113 73 68 chr2 77861707 77862014 -172825840 + MER4B LTR ERV1 1 305 -474 2067 127 0 0 chr2 77862014 77862314 -172825540 - AluSq SINE Alu -13 300 1 2655 113 73 68 chr2 77862314 77862610 -172825244 + MER4B LTR ERV1 305 779 0 2372 73 0 0 chr2 77862658 77862958 -172824896 + AluY SINE Alu 2 301 -10 1790 141 0 71 chr2 77863046 77863372 -172824482 + AluJb SINE Alu 1 303 -9 254 146 73 0 chr2 77863382 77863437 -172824417 + L1MC4 LINE L1 7981 8039 -3 538 273 20 21 chr2 77863603 77863794 -172824060 + MIR SINE MIR 17 207 -55 331 333 136 20 chr2 77864043 77864337 -172823517 + L2 LINE L2 2133 2460 -854 548 309 28 44 chr2 77864359 77864611 -172823243 - MIR SINE MIR -10 252 5 382 274 206 0 chr2 77864744 77864919 -172822935 - L1ME4a LINE L1 -1 6120 5910 1682 51 4 55 chr2 77864930 77865167 -172822687 - AluSc SINE Alu -2 307 83 225 216 270 0 chr2 77865380 77865454 -172822400 - L1ME4a LINE L1 -347 5827 5734 331 303 37 18 chr2 77865467 77865576 -172822278 - L1ME4a LINE L1 -273 5848 5738 297 346 24 16 chr2 77865660 77865787 -172822067 + L2 LINE L2 3143 3270 -2 620 272 166 71 chr2 77867239 77867607 -172820247 - L2 LINE L2 -1 3312 2910 767 290 80 7 chr2 77867628 77867928 -172819926 - L2 LINE L2 -561 2753 2432 24 91 0 0 chr2 77868491 77868557 -172819297 + GC_rich Low_complexity Low_complexity 1 66 0 351 315 50 11 chr2 77870310 77870491 -172817363 - L3 LINE CR1 -185 1392 1205 2543 43 0 0 chr2 77874608 77874913 -172812941 - AluY SINE Alu -6 305 1 2301 74 3 0 chr2 77874913 77875209 -172812645 - AluSp SINE Alu -15 298 1 375 265 99 56 chr2 77875215 77875377 -172812477 - MIR SINE MIR -71 191 23 24 53 0 0 chr2 77876085 77876123 -172811731 + GC_rich Low_complexity Low_complexity 1 38 0 1003 50 0 0 chr2 77876524 77876645 -172811209 + AluSg/x SINE Alu 178 298 -12 2120 123 7 0 chr2 77876652 77876962 -172810892 + AluSq SINE Alu 1 312 -1 294 125 0 0 chr2 77876965 77877013 -172810841 + (GGGA)n Simple_repeat Simple_repeat 2 49 0 244 257 218 0 chr2 77877263 77877364 -172810490 - L2 LINE L2 0 3313 3191 2439 63 3 0 chr2 77877405 77877708 -172810146 - AluSx SINE Alu -8 304 1 265 250 133 58 chr2 77877713 77877833 -172810021 - MIR SINE MIR -115 147 19 2247 92 3 6 chr2 77877833 77878147 -172809707 + AluSp SINE Alu 1 313 0 748 246 45 10 chr2 77878166 77878365 -172809489 - MIR SINE MIR -21 241 36 317 189 41 90 chr2 77878575 77878697 -172809157 + MER112 DNA MER1_type 1 116 -144 1141 211 111 43 chr2 77878700 77878841 -172809013 + AluJo SINE Alu 2 132 -170 2150 80 48 0 chr2 77878841 77879130 -172808724 + AluSx SINE Alu 1 303 -9 1141 211 111 43 chr2 77879130 77879267 -172808587 + AluJo SINE Alu 132 299 -3 376 138 15 31 chr2 77879270 77879335 -172808519 + AluSc SINE Alu 185 248 -51 1126 165 0 10 chr2 77879335 77879535 -172808319 + AluJo SINE Alu 85 282 -30 2082 100 7 7 chr2 77879570 77879861 -172807993 - AluSq SINE Alu -10 303 13 1872 153 0 25 chr2 77879885 77880205 -172807649 - AluSx SINE Alu 0 312 1 36 0 0 0 chr2 77880208 77880244 -172807610 + AT_rich Low_complexity Low_complexity 1 36 0 2081 102 24 0 chr2 77880254 77880547 -172807307 + AluSp SINE Alu 1 300 -13 2115 102 7 10 chr2 77880624 77880919 -172806935 - AluSg SINE Alu -16 294 1 865 191 6 6 chr2 77881080 77881242 -172806612 - FRAM SINE Alu -15 161 1 1864 128 32 0 chr2 77881689 77881970 -172805884 + AluSg SINE Alu 1 290 -20 813 139 0 29 chr2 77881981 77882118 -172805736 + FLAM_C SINE Alu 1 133 0 1486 136 115 25 chr2 77882181 77882460 -172805394 - AluSx SINE Alu -8 304 1 1318 169 85 27 chr2 77882500 77882795 -172805059 + AluJo SINE Alu 1 312 0 2066 76 11 4 chr2 77884276 77884553 -172803301 - AluY SINE Alu -18 293 15 2453 71 3 0 chr2 77884714 77885022 -172802832 - AluSp SINE Alu -4 309 1 2413 63 3 0 chr2 77885032 77885332 -172802522 - AluY SINE Alu -10 301 1 531 0 0 0 chr2 77886995 77887054 -172800800 + (CA)n Simple_repeat Simple_repeat 2 60 0 2069 114 0 0 chr2 77887131 77887412 -172800442 - AluSx SINE Alu -20 292 12 2005 106 4 0 chr2 77888071 77888345 -172799509 - AluSq SINE Alu -15 298 24 542 149 11 0 chr2 77888799 77888886 -172798968 + AluJb SINE Alu 1 88 -224 289 71 24 0 chr2 77888886 77888928 -172798926 + MER4E LTR ERV1 654 696 -70 284 93 53 0 chr2 77888948 77889023 -172798831 + (TA)n Simple_repeat Simple_repeat 1 79 0 2072 115 21 0 chr2 77889024 77889310 -172798544 - AluSx SINE Alu -18 294 3 1909 103 4 7 chr2 77889318 77889590 -172798264 - AluSq SINE Alu -5 308 38 1190 148 20 94 chr2 77889615 77889695 -172798159 + AluJb SINE Alu 73 157 -155 2280 93 3 0 chr2 77889695 77889995 -172797859 + AluSx SINE Alu 1 301 -11 1190 148 20 94 chr2 77889995 77890158 -172797696 + AluJb SINE Alu 157 298 -14 512 299 77 58 chr2 77890286 77890547 -172797307 + HAL1 LINE L1 2225 2490 -17 1429 121 7 92 chr2 77890547 77890828 -172797026 - AluJo SINE Alu -19 293 37 799 209 36 18 chr2 77890875 77891100 -172796754 + L1MC5 LINE L1 7016 7244 -717 488 194 60 22 chr2 77891114 77891248 -172796606 + L1MC5 LINE L1 7786 7924 -37 2007 141 0 7 chr2 77891257 77891561 -172796293 + AluJb SINE Alu 1 302 -10 1475 120 154 19 chr2 77894645 77894904 -172792950 + AluJo SINE Alu 1 294 -8 2168 106 0 3 chr2 77894904 77895205 -172792649 + AluSx SINE Alu 1 300 -12 2266 89 0 3 chr2 77895403 77895705 -172792149 - AluSc SINE Alu -6 303 3 2087 122 7 0 chr2 77895970 77896273 -172791581 - AluSg SINE Alu -5 305 1 2337 82 7 3 chr2 77896416 77896720 -172791134 - AluSq SINE Alu -8 305 1 847 130 8 0 chr2 77896723 77896854 -172791000 - AluSp SINE Alu -181 132 1 2085 113 3 3 chr2 77896936 77897228 -172790626 + AluSc SINE Alu 1 292 -17 988 317 77 33 chr2 77897313 77897561 -172790293 - L2 LINE L2 -5 3308 3072 2227 97 3 3 chr2 77897561 77897859 -172789995 + AluSp SINE Alu 1 298 -15 988 317 77 33 chr2 77897859 77898092 -172789762 - L2 LINE L2 -241 3072 2806 2165 108 3 0 chr2 77898172 77898468 -172789386 - AluSx SINE Alu -15 297 1 40 0 0 0 chr2 77898468 77898508 -172789346 + AT_rich Low_complexity Low_complexity 1 40 0 1994 133 3 0 chr2 77898607 77898930 -172788924 - AluSx SINE Alu 0 324 1 983 171 6 6 chr2 77898933 77899103 -172788751 - AluJo SINE Alu -20 292 123 336 298 137 0 chr2 77899464 77899595 -172788259 - MIR3 SINE MIR -7 201 53 757 206 0 0 chr2 77899597 77899728 -172788126 + FLAM_A SINE Alu 1 131 -2 1934 125 31 0 chr2 77899733 77900020 -172787834 + AluSx SINE Alu 1 296 -16 234 0 0 0 chr2 77900947 77900973 -172786881 + (TCCCC)n Simple_repeat Simple_repeat 2 27 0 391 281 195 11 chr2 77901883 77902068 -172785786 + MIR SINE MIR 44 262 0 231 215 123 15 chr2 77902791 77902856 -172784998 + MIR SINE MIR 123 194 -68 584 259 63 11 chr2 77905319 77905493 -172782361 + MIR SINE MIR 66 248 -14 201 171 0 24 chr2 77905462 77905503 -172782351 + L2 LINE L2 3263 3302 -11 * 753 185 22 84 chr2 77905601 77905674 -172782180 + MER5A DNA MER1_type 5 81 -108 2228 84 24 0 chr2 77905674 77905970 -172781884 + AluSp SINE Alu 1 303 -10 753 185 22 84 chr2 77905970 77906074 -172781780 + MER5A DNA MER1_type 81 171 -18 586 254 0 0 chr2 77906676 77906790 -172781064 + MER81 DNA DNA 1 114 0 180 306 89 43 chr2 77907011 77907246 -172780608 + L2 LINE L2 2550 2795 -519 516 306 102 10 chr2 77907306 77907512 -172780342 + MIR SINE MIR 11 235 -27 339 269 29 10 chr2 77908288 77908392 -172779462 + MIR SINE MIR 118 223 -39 1266 129 13 43 chr2 77908502 77908735 -172779119 + AluJo SINE Alu 81 306 -6 2280 77 27 3 chr2 77917246 77917543 -172770311 + AluY SINE Alu 1 304 -7 605 286 91 35 chr2 77919867 77919984 -172767870 + L2 LINE L2 2572 2681 -633 714 199 21 11 chr2 77919984 77920170 -172767684 + L1MA10 LINE L1 6147 6334 0 605 286 91 35 chr2 77920170 77920283 -172767571 + L2 LINE L2 2681 2815 -499 30 45 0 0 chr2 77920473 77920517 -172767337 + AT_rich Low_complexity Low_complexity 1 44 0 338 333 62 8 chr2 77920568 77920697 -172767157 + L2 LINE L2 3137 3272 0 184 350 40 10 chr2 77920702 77920802 -172767052 - L2 LINE L2 -701 2613 2511 2087 131 3 6 chr2 77921065 77921378 -172766476 + AluJb SINE Alu 1 312 0 2423 72 0 0 chr2 77921872 77922177 -172765677 - AluY SINE Alu -6 305 1 661 209 0 60 chr2 77922261 77922395 -172765459 + FLAM_A SINE Alu 5 130 -3 1991 124 6 10 chr2 77922846 77923160 -172764694 - AluSq SINE Alu 0 313 1 2384 51 7 0 chr2 77923398 77923690 -172764164 - AluY SINE Alu -16 295 2 31 0 0 0 chr2 77924233 77924264 -172763590 + GC_rich Low_complexity Low_complexity 1 31 0 206 301 10 48 chr2 77928120 77928223 -172759631 - L2 LINE L2 -1085 2229 2131 2244 84 10 3 chr2 77928296 77928593 -172759261 + AluSc SINE Alu 1 299 -10 823 194 0 88 chr2 77929586 77929756 -172758098 - AluJo/FRAM SINE Alu -1 311 157 279 185 0 0 chr2 77929757 77929811 -172758043 - AluJ/FLAM SINE Alu -215 87 34 541 353 57 46 chr2 77931087 77931543 -172756311 - L2 LINE L2 -5 3267 2807 1907 158 7 3 chr2 77931613 77931923 -172755931 - AluJb SINE Alu -1 311 1 22 0 0 0 chr2 77932083 77932105 -172755749 + AT_rich Low_complexity Low_complexity 1 22 0 2149 135 0 0 chr2 77932318 77932630 -172755224 + AluSx SINE Alu 1 312 0 303 203 0 0 chr2 77932655 77932729 -172755125 + CT-rich Low_complexity Low_complexity 2 75 0 640 345 134 22 chr2 77932732 77933410 -172754444 - L2 LINE L2 -1037 2277 1524 185 0 40 0 chr2 77934788 77934813 -172753041 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2080 115 56 0 chr2 77935511 77935800 -172752054 + AluJb SINE Alu 1 303 -9 23 0 0 0 chr2 77944039 77944062 -172743792 + AT_rich Low_complexity Low_complexity 1 23 0 2307 117 0 0 chr2 77945761 77946070 -172741784 - AluSg SINE Alu 0 310 2 238 293 20 20 chr2 77950304 77950403 -172737451 + G-rich Low_complexity Low_complexity 1 99 0 1116 76 0 0 chr2 77950910 77951041 -172736813 - AluSg SINE Alu -179 131 1 1727 167 36 23 chr2 77951552 77951858 -172735996 - AluJo SINE Alu -2 310 1 1755 138 132 0 chr2 77951928 77952232 -172735622 - MER2 DNA MER2_type 0 344 1 21 0 0 0 chr2 77952657 77952678 -172735176 + AT_rich Low_complexity Low_complexity 1 21 0 33 0 0 0 chr2 77952735 77952768 -172735086 + AT_rich Low_complexity Low_complexity 1 33 0 2114 126 0 10 chr2 77952905 77953244 -172734610 + AluJo SINE Alu 1 312 0 228 67 0 0 chr2 77953408 77953438 -172734416 + (CA)n Simple_repeat Simple_repeat 2 31 0 328 292 199 65 chr2 77953448 77953521 -172734333 + L2 LINE L2 1752 1814 -1500 2415 97 3 0 chr2 77953521 77953819 -172734035 - AluSx SINE Alu -13 299 1 328 292 199 65 chr2 77953819 77954447 -172733407 + L2 LINE L2 1814 2547 -767 2138 109 0 63 chr2 77954492 77954823 -172733031 + AluSx SINE Alu 1 310 -2 272 280 0 137 chr2 77954849 77954916 -172732938 + L2 LINE L2 2690 2723 -591 2091 93 14 4 chr2 77954916 77955230 -172732624 + AluSx SINE Alu 1 317 0 272 280 0 137 chr2 77955230 77955329 -172732525 + L2 LINE L2 2723 2834 -480 330 232 37 24 chr2 77955334 77955416 -172732438 + L2 LINE L2 3230 3312 -1 2163 245 105 65 chr2 77956450 77957578 -172730276 + L2 LINE L2 1886 3056 -257 183 80 0 0 chr2 77957578 77957603 -172730251 + (CTTA)n Simple_repeat Simple_repeat 1 25 0 2550 56 10 0 chr2 77957604 77957908 -172729946 - AluSp SINE Alu -6 307 1 1881 133 21 39 chr2 77957916 77958202 -172729652 - AluJb SINE Alu -20 292 12 286 254 0 0 chr2 77958206 77958269 -172729585 + L2 LINE L2 3251 3313 0 642 351 81 38 chr2 77958624 77959328 -172728526 + L3 LINE CR1 250 983 -594 27 0 0 0 chr2 77959746 77959773 -172728081 + GC_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 77959977 77960000 -172727854 + GC_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 77960238 77960259 -172727595 + GC_rich Low_complexity Low_complexity 1 21 0 329 347 144 0 chr2 77961529 77961696 -172726158 - MIR SINE MIR -2 260 70 2339 114 0 3 chr2 77961829 77962128 -172725726 - AluSx SINE Alu -14 298 1 196 269 135 48 chr2 77962156 77962260 -172725594 - L3 LINE CR1 -15 1562 1450 592 330 43 23 chr2 77962301 77962601 -172725253 - L3 LINE CR1 -224 1353 1048 365 243 126 0 chr2 77962941 77963052 -172724802 - MIR3 SINE MIR -3 205 81 255 350 0 0 chr2 77963552 77963709 -172724145 + GA-rich Low_complexity Low_complexity 2 158 0 250 195 5 118 chr2 77963644 77963839 -172724015 + (CAGAGA)n Simple_repeat Simple_repeat 4 176 0 * 339 316 7 0 chr2 77963781 77963936 -172723918 + GA-rich Low_complexity Low_complexity 1 156 0 248 263 6 56 chr2 77964875 77965035 -172722819 + C-rich Low_complexity Low_complexity 4 155 0 29 0 0 0 chr2 77965118 77965147 -172722707 + GC_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr2 77965211 77965246 -172722608 + GC_rich Low_complexity Low_complexity 1 35 0 285 211 105 83 chr2 77968625 77968758 -172719096 + MIR SINE MIR 79 214 -48 853 137 0 43 chr2 77968791 77968930 -172718924 - AluJb SINE Alu -179 133 1 2056 129 14 10 chr2 77970059 77970354 -172717500 - AluJb SINE Alu -16 296 1 462 248 72 20 chr2 77970535 77970688 -172717166 + MIR SINE MIR 96 256 -6 201 114 23 68 chr2 77970994 77971038 -172716816 + GA-rich Low_complexity Low_complexity 3 44 0 1389 98 0 0 chr2 77971912 77972175 -172715679 + (GGA)n Simple_repeat Simple_repeat 3 264 0 910 172 0 25 chr2 77973675 77973832 -172714022 + FRAM SINE Alu 12 164 -12 730 151 50 0 chr2 77973994 77974113 -172713741 + FLAM_C SINE Alu 2 126 -17 230 95 24 0 chr2 77974124 77974166 -172713688 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 2295 116 3 0 chr2 77974212 77974522 -172713332 + AluSq SINE Alu 1 311 -2 219 313 0 0 chr2 77975395 77975459 -172712395 - MIR SINE MIR -1 261 198 2397 90 0 7 chr2 77975833 77976133 -172711721 + AluSx SINE Alu 1 298 -14 235 128 128 0 chr2 77976133 77976180 -172711674 - L2 LINE L2 -20 3293 3241 1849 228 19 22 chr2 77976187 77976441 -172711413 + L1M4 LINE L1 3667 3920 -2226 2213 97 0 7 chr2 77976441 77976720 -172711134 + AluSg SINE Alu 1 277 -33 363 23 0 0 chr2 77976720 77976764 -172711090 + (CA)n Simple_repeat Simple_repeat 1 44 0 1849 228 19 22 chr2 77976764 77976972 -172710882 + L1M4 LINE L1 3918 4129 -2017 232 353 89 30 chr2 77977251 77977486 -172710368 - L2 LINE L2 -215 3057 2809 30 0 0 0 chr2 77978013 77978043 -172709811 + AT_rich Low_complexity Low_complexity 1 30 0 644 230 40 0 chr2 77978387 77978539 -172709315 + MIR SINE MIR 102 259 -3 272 293 113 0 chr2 77979922 77980099 -172707755 + L1MCc LINE L1 1368 1728 -4939 265 312 80 0 chr2 77980100 77980225 -172707629 - MIR SINE MIR -5 257 123 2306 98 20 0 chr2 77980270 77980567 -172707287 - AluSx SINE Alu -9 303 1 438 69 0 0 chr2 77980769 77980827 -172707027 + (TG)n Simple_repeat Simple_repeat 1 58 0 298 310 35 26 chr2 77981046 77981162 -172706692 - MIR SINE MIR -126 136 20 245 328 59 49 chr2 77981614 77981901 -172705953 - L2 LINE L2 -460 2854 2565 265 352 130 19 chr2 77981975 77982282 -172705572 - L2 LINE L2 -606 2708 2368 2461 94 3 3 chr2 77982607 77982916 -172704938 + AluSp SINE Alu 1 309 -4 1622 172 19 0 chr2 77983240 77983501 -172704353 - AluJo SINE Alu -34 278 13 691 263 35 15 chr2 77983506 77983704 -172704150 + MIR SINE MIR 54 255 -7 215 261 77 0 chr2 77983769 77983834 -172704020 + L2 LINE L2 3243 3312 -1 2282 94 0 30 chr2 77983947 77984246 -172703608 - AluSg SINE Alu -20 290 1 2178 119 0 0 chr2 77984257 77984543 -172703311 - AluSx SINE Alu -24 288 3 481 275 13 7 chr2 77984545 77984694 -172703160 - L1ME LINE L1 -342 5779 5630 892 302 85 69 chr2 77985157 77985293 -172702561 + L2 LINE L2 2395 2527 -745 252 111 0 0 chr2 77985293 77985329 -172702525 - U2 snRNA snRNA -152 36 1 892 302 85 69 chr2 77985329 77985988 -172701866 + L2 LINE L2 2527 3246 -26 241 274 0 32 chr2 77986584 77986646 -172701208 + L2 LINE L2 3181 3240 -32 1050 154 11 28 chr2 77986737 77986919 -172700935 - FRAM SINE Alu -2 174 5 673 197 10 121 chr2 77988728 77988769 -172699085 + MER5B DNA MER1_type 1 45 -133 1886 131 138 13 chr2 77988769 77989067 -172698787 - MER1B DNA MER1_type 0 337 3 673 197 10 121 chr2 77989067 77989159 -172698695 + MER5B DNA MER1_type 45 108 -70 1608 64 0 0 chr2 77989159 77989347 -172698507 - L1PA6 LINE L1 -9 6145 5958 673 197 10 121 chr2 77989347 77989410 -172698444 + MER5B DNA MER1_type 108 176 -2 563 238 65 19 chr2 77990352 77990525 -172697329 + MIR SINE MIR 12 186 -22 322 191 32 43 chr2 77990587 77990681 -172697173 + HsTC2 DNA Tc2 1743 1835 -63 1629 173 21 17 chr2 77990710 77990999 -172696855 - AluJo SINE Alu -22 290 1 536 108 0 0 chr2 77991001 77991075 -172696779 + HsTC2 DNA Tc2 1825 1898 0 343 235 69 0 chr2 77991075 77991177 -172696677 + MIR SINE MIR 150 258 -4 1577 150 6 94 chr2 77992816 77993136 -172694718 - AluJo SINE Alu -9 293 2 522 292 100 51 chr2 77993145 77993593 -172694261 + L1ME4a LINE L1 5612 6081 -40 1950 131 40 0 chr2 77993635 77993945 -172693909 + AluSq SINE Alu 5 325 0 30 0 0 0 chr2 77994117 77994147 -172693707 + AT_rich Low_complexity Low_complexity 1 30 0 848 159 0 36 chr2 77995220 77995358 -172692496 + FLAM_A SINE Alu 1 133 0 216 0 0 0 chr2 77995698 77995722 -172692132 + (TA)n Simple_repeat Simple_repeat 2 25 0 2030 155 0 0 chr2 77995732 77996035 -172691819 - AluJb SINE Alu -9 303 1 220 340 88 61 chr2 77996703 77997250 -172690604 + L2 LINE L2 2596 3263 -9 2457 77 0 3 chr2 77997611 77997911 -172689943 + AluSp SINE Alu 1 299 -14 2519 74 0 0 chr2 77998079 77998390 -172689464 - AluY SINE Alu 0 311 1 234 240 0 80 chr2 77999161 77999236 -172688618 + Charlie4 DNA MER1_type 1892 1960 -1 1036 300 86 16 chr2 77999758 78000191 -172687663 - L2 LINE L2 0 3313 2851 1531 83 113 0 chr2 78000762 78000966 -172686888 + MER30 DNA MER1_type 4 230 0 2035 154 11 46 chr2 78000999 78001369 -172686485 - MLT1A1 LTR MaLR -8 357 1 329 256 24 12 chr2 78001742 78001824 -172686030 + L2 LINE L2 3189 3271 -1 454 289 23 0 chr2 78001829 78001957 -172685897 + MIR SINE MIR 61 191 -71 1926 131 35 0 chr2 78002684 78002847 -172685007 - AluSx SINE Alu -18 294 115 219 36 0 0 chr2 78002847 78002875 -172684979 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1926 131 35 0 chr2 78002875 78002993 -172684861 - AluSx SINE Alu -197 115 3 1011 259 60 32 chr2 78003197 78003834 -172684020 - L1MC/D LINE L1 -743 5403 4822 1734 275 50 58 chr2 78004214 78004265 -172683589 + L1ME LINE L1 495 545 -5985 1953 165 0 0 chr2 78004265 78004573 -172683281 - AluSx SINE Alu 0 308 1 1734 275 50 58 chr2 78004573 78005306 -172682548 + L1ME LINE L1 545 1273 -5257 957 214 47 68 chr2 78005325 78005484 -172682370 + L1ME LINE L1 1469 1630 -4910 1808 174 0 17 chr2 78005484 78005782 -172682072 + AluJb SINE Alu 1 293 -19 957 214 47 68 chr2 78005782 78006005 -172681849 + L1ME LINE L1 1630 1843 -4697 1288 158 10 5 chr2 78006005 78006207 -172681647 - AluJo SINE Alu -109 203 1 2051 121 0 0 chr2 78006252 78006524 -172681330 - AluJb SINE Alu -20 292 21 1082 230 59 12 chr2 78006763 78007190 -172680664 + L1ME LINE L1 2262 2706 -3834 2343 74 0 0 chr2 78007193 78007511 -172680343 + AluY SINE Alu 1 318 0 1850 249 52 12 chr2 78007519 78008020 -172679834 + L1ME1 LINE L1 5645 6165 -1 23 33 0 0 chr2 78008027 78008057 -172679797 + AT_rich Low_complexity Low_complexity 1 30 0 441 173 13 0 chr2 78008491 78008566 -172679288 + L3 LINE CR1 231 306 -1271 366 297 94 22 chr2 78008567 78008705 -172679149 + L3 LINE CR1 467 614 -963 2097 117 0 0 chr2 78008992 78009308 -172678546 + AluSx SINE Alu 1 316 0 2018 147 13 3 chr2 78009514 78009814 -172678040 - AluJb SINE Alu -9 303 1 2028 117 21 3 chr2 78009888 78010170 -172677684 + AluSx SINE Alu 1 287 -25 693 270 56 42 chr2 78010194 78010553 -172677301 - L1M4 LINE L1 -1039 5107 4744 183 42 0 0 chr2 78010662 78010686 -172677168 + (CA)n Simple_repeat Simple_repeat 2 25 0 660 195 16 24 chr2 78010725 78010848 -172677006 - AluJo SINE Alu -15 297 176 535 198 228 0 chr2 78010854 78010955 -172676899 - AluJo SINE Alu -187 125 2 262 286 210 49 chr2 78010993 78011217 -172676637 + MIR SINE MIR 2 261 -1 410 169 50 189 chr2 78011875 78012076 -172675778 - MIR SINE MIR -11 251 79 379 292 38 38 chr2 78012097 78012462 -172675392 + L1MC4a LINE L1 1187 5959 -3 315 314 41 33 chr2 78013113 78013234 -172674620 - L2 LINE L2 0 3272 3151 398 299 197 7 chr2 78013341 78013488 -172674366 - MIR SINE MIR -57 205 31 181 287 213 0 chr2 78014126 78014234 -172673620 - L2 LINE L2 0 3313 3183 2256 128 6 29 chr2 78015223 78015568 -172672286 - MER1B DNA MER1_type 0 337 1 831 77 29 0 chr2 78015820 78015924 -172671930 + AluSq/x SINE Alu 1 107 -206 441 268 79 37 chr2 78016011 78016175 -172671679 + L1ME LINE L1 5523 5693 -428 879 155 7 39 chr2 78016175 78016330 -172671524 - MER45C DNA AcHobo 0 953 804 722 148 0 23 chr2 78016352 78016480 -172671374 - L1MB1 LINE L1 0 6168 6044 2410 71 0 3 chr2 78016512 78016809 -172671045 + AluY SINE Alu 2 297 -14 365 171 40 53 chr2 78016809 78016885 -172670969 - MER45C DNA AcHobo -157 796 722 1110 226 54 5 chr2 78017017 78017238 -172670616 - MER45C DNA AcHobo -721 232 1 983 27 0 0 chr2 78017789 78017900 -172669954 - L1PA4 LINE L1 -3 6152 6042 2289 76 3 10 chr2 78018375 78018666 -172669188 - AluSg SINE Alu -21 289 1 6842 122 20 8 chr2 78018810 78019838 -172668016 - L1MC1 LINE L1 -1 6332 5292 6630 119 41 9 chr2 78019823 78020897 -172666957 - L1MA6 LINE L1 0 6300 5197 * 1935 138 0 36 chr2 78020897 78021201 -172666653 - AluJb SINE Alu -19 293 1 6630 119 41 9 chr2 78021201 78021337 -172666517 - L1MA6 LINE L1 -1103 5197 5067 1631 161 28 32 chr2 78021353 78021638 -172666216 - AluJo SINE Alu -26 286 3 6203 156 30 31 chr2 78021640 78022518 -172665336 - L1MA6 LINE L1 -2064 4082 3205 1778 83 4 21 chr2 78022518 78022759 -172665095 + AluSp SINE Alu 76 312 -1 6203 156 30 31 chr2 78022759 78022776 -172665078 - L1MA6 LINE L1 -2941 3205 3189 2564 52 10 3 chr2 78022776 78023085 -172664769 - AluY SINE Alu 0 311 1 6203 156 30 31 chr2 78023085 78023107 -172664747 - L1MA6 LINE L1 -2957 3189 3168 1637 163 4 14 chr2 78023107 78023383 -172664471 - AluJo SINE Alu -8 304 32 6203 156 30 31 chr2 78023383 78023685 -172664169 - L1MA6 LINE L1 -2978 3168 2862 * 6930 127 75 62 chr2 78023684 78024734 -172663120 - L1MCa LINE L1 -5042 1384 312 1526 160 8 4 chr2 78024734 78024971 -172662883 - AluJo SINE Alu -63 249 12 6930 127 75 62 chr2 78024971 78025268 -172662586 - L1MCa LINE L1 -6114 312 20 199 321 0 0 chr2 78026156 78026209 -172661645 - L2 LINE L2 -4 3268 3216 2601 192 35 55 chr2 78027092 78027837 -172660017 - Charlie2 DNA MER1_type -1 2861 2132 2266 65 18 0 chr2 78028304 78028582 -172659272 + L1PA13 LINE L1 5877 6159 -4 2347 46 16 33 chr2 78031894 78032201 -172655653 + AluY SINE Alu 1 302 -9 974 201 52 82 chr2 78032273 78032398 -172655456 + MER33 DNA MER1_type 6 133 -2452 2462 55 0 26 chr2 78032398 78032710 -172655144 + AluY SINE Alu 1 304 -7 2068 121 0 43 chr2 78032720 78033043 -172654811 + AluSx SINE Alu 1 309 -3 974 201 52 82 chr2 78033043 78033129 -172654725 + MER33 DNA MER1_type 142 229 -2356 2299 80 17 0 chr2 78033129 78033429 -172654425 - AluSq SINE Alu -8 305 1 974 201 52 82 chr2 78033429 78033534 -172654320 + MER33 DNA MER1_type 229 324 0 460 305 102 44 chr2 78033749 78034110 -172653744 + L1MEc LINE L1 2013 2394 -4002 1891 168 3 0 chr2 78034116 78034413 -172653441 + AluJb SINE Alu 1 298 -14 360 291 55 18 chr2 78034428 78034538 -172653316 - MER5B DNA MER1_type -57 121 8 2027 138 3 0 chr2 78034576 78034865 -172652989 - AluJo SINE Alu -22 290 1 1457 268 71 21 chr2 78035678 78036212 -172651642 - L1MC/D LINE L1 -1993 5815 5255 24 53 0 0 chr2 78036304 78036342 -172651512 + AT_rich Low_complexity Low_complexity 1 38 0 699 196 118 13 chr2 78036396 78036549 -172651305 + LTR41 LTR ERVL 1 169 -604 322 212 83 125 chr2 78036962 78037152 -172650702 + LTR41 LTR ERVL 515 692 -81 1724 156 36 33 chr2 78037152 78037453 -172650401 - AluJo SINE Alu -10 302 1 322 212 83 125 chr2 78037453 78037526 -172650328 + LTR41 LTR ERVL 692 767 -6 258 290 108 26 chr2 78037538 78037807 -172650047 - L1MC/D LINE L1 -1103 5043 4753 393 278 119 16 chr2 78038088 78038408 -172649446 - L1MC/D LINE L1 -1671 4475 4123 475 297 50 43 chr2 78039840 78040163 -172647691 - L1MC/D LINE L1 -2020 4126 3802 2133 129 55 26 chr2 78040195 78040365 -172647489 + MER46B DNA MER2_type 1 63 -2668 2179 109 0 3 chr2 78040365 78040658 -172647196 + AluSg SINE Alu 1 292 -18 2133 129 55 26 chr2 78040658 78040835 -172647019 + MER46B DNA MER2_type 63 233 -3 1769 172 27 14 chr2 78040835 78041131 -172646723 - AluJb SINE Alu -12 300 1 4359 79 13 4 chr2 78041223 78041777 -172646077 - L1PA10 LINE L1 -3 6165 5607 321 285 76 1 chr2 78041837 78042032 -172645822 - L1MC/D LINE L1 -3746 2400 2192 21 0 0 0 chr2 78042139 78042160 -172645694 + AT_rich Low_complexity Low_complexity 1 21 0 28 61 0 0 chr2 78042510 78042559 -172645295 + AT_rich Low_complexity Low_complexity 1 49 0 3373 200 47 14 chr2 78043028 78043694 -172644160 + MER76 LTR ERV 1 688 0 1086 272 19 0 chr2 78043876 78044133 -172643721 + LTR33 LTR ERVL 1 262 -259 2819 106 9 119 chr2 78044134 78044671 -172643183 + MER31A LTR ERV1 8 485 0 239 209 0 0 chr2 78044671 78044703 -172643151 + LTR33 LTR ERVL 254 285 -236 360 191 29 67 chr2 78044752 78044857 -172642997 + LTR33 LTR ERVL 417 517 -4 274 246 15 0 chr2 78045297 78045362 -172642492 + MLT1F1 LTR MaLR 3 68 -499 7543 206 66 16 chr2 78045362 78047689 -172640165 - L1MDa LINE L1 -1902 4638 2192 620 157 0 0 chr2 78047689 78047772 -172640082 - AluJ/FLAM SINE Alu -228 84 2 4451 244 67 25 chr2 78047773 78048950 -172638904 - L1MDa LINE L1 -4940 1781 538 1911 82 4 0 chr2 78048950 78049193 -172638661 - AluSx SINE Alu -13 299 56 4451 244 67 25 chr2 78049193 78049361 -172638493 - L1MDa LINE L1 -6183 538 379 2058 204 123 9 chr2 78049362 78049794 -172638060 + MLT1F1 LTR MaLR 85 565 -2 236 245 98 49 chr2 78050781 78050924 -172636930 - LTR68 LTR ERV1 -577 163 14 2342 89 10 0 chr2 78051358 78051650 -172636204 - AluSc SINE Alu -14 295 1 364 298 89 24 chr2 78051828 78051952 -172635902 + L2 LINE L2 3107 3238 -34 221 295 42 11 chr2 78052135 78052230 -172635624 + L2 LINE L2 2926 3023 -249 2032 244 93 48 chr2 78052249 78052537 -172635317 + L1M4 LINE L1 3273 3547 -2599 1038 105 0 0 chr2 78052537 78052670 -172635184 - FLAM_C SINE Alu 0 133 1 2032 244 93 48 chr2 78052670 78052742 -172635112 + L1M4 LINE L1 3547 3614 -2532 2189 75 57 0 chr2 78052742 78053024 -172634830 - AluSp SINE Alu -15 298 1 2032 244 93 48 chr2 78053024 78053602 -172634252 + L1M4 LINE L1 3614 4254 -1892 803 175 0 0 chr2 78053786 78053912 -172633942 - FLAM_C SINE Alu -17 126 1 335 336 50 0 chr2 78053912 78054031 -172633823 - L1M4 LINE L1 -1818 4328 4204 1039 202 60 152 chr2 78054079 78054482 -172633372 + L1ME3A LINE L1 5691 6037 -133 2003 136 0 16 chr2 78054482 78054790 -172633064 - AluJb SINE Alu -9 303 1 1039 202 60 152 chr2 78054790 78054906 -172632948 + L1ME3A LINE L1 6037 6162 -8 2435 77 0 0 chr2 78055152 78055449 -172632405 + AluSg SINE Alu 1 297 -13 22 35 0 0 chr2 78055786 78055815 -172632039 + AT_rich Low_complexity Low_complexity 1 29 0 326 241 11 0 chr2 78055867 78055954 -172631900 + LTR30 LTR ERV1 556 643 -79 2330 84 46 0 chr2 78055954 78056277 -172631577 + LTR12 LTR ERV1 377 714 0 2756 142 2 5 chr2 78056320 78056736 -172631118 + MER66B LTR ERV1 1 415 -71 23 0 0 0 chr2 78056736 78056759 -172631095 + AT_rich Low_complexity Low_complexity 1 23 0 5067 164 84 44 chr2 78056763 78057800 -172630054 + Tigger6a DNA MER2_type 2 1079 -4 611 183 114 114 chr2 78058305 78058506 -172629348 + ORSL DNA AcHobo 1 204 -71 2251 86 10 10 chr2 78058506 78058819 -172629035 + AluSq SINE Alu 1 313 0 611 183 114 114 chr2 78058819 78058890 -172628964 + ORSL DNA AcHobo 203 273 -2 371 259 56 9 chr2 78059533 78059641 -172628213 - L2 LINE L2 -5 3267 3155 2290 190 13 10 chr2 78060390 78060785 -172627069 - MSTD LTR MaLR 0 396 1 512 333 47 16 chr2 78060933 78061028 -172626826 + LTR16B LTR ERVL 1 92 -372 2414 87 3 3 chr2 78061028 78061339 -172626515 + AluSp SINE Alu 1 311 -2 512 333 47 16 chr2 78061339 78061435 -172626419 + LTR16B LTR ERVL 92 198 -266 876 265 47 131 chr2 78061515 78062239 -172625615 - L2 LINE L2 -427 2887 2225 460 174 46 55 chr2 78062268 78062377 -172625477 - MER112 DNA MER1_type -1 259 152 21 36 0 0 chr2 78062549 78062577 -172625277 + AT_rich Low_complexity Low_complexity 1 28 0 1630 138 24 8 chr2 78062828 78063082 -172624772 - AluJo SINE Alu -54 258 1 297 231 62 0 chr2 78063102 78063167 -172624687 + L2 LINE L2 3244 3312 -1 196 356 132 34 chr2 78063178 78063383 -172624471 - L2 LINE L2 -602 2712 2488 2135 200 16 31 chr2 78063385 78063875 -172623979 + MLT1F LTR MaLR 3 485 -57 308 93 13 147 chr2 78063932 78064007 -172623847 + MLT1F LTR MaLR 503 567 0 2719 29 3 0 chr2 78064078 78064386 -172623468 + AluY SINE Alu 1 309 -2 308 277 39 121 chr2 78064487 78064736 -172623118 + L2 LINE L2 2977 3198 -74 330 26 0 0 chr2 78064736 78064775 -172623079 + (TG)n Simple_repeat Simple_repeat 1 39 0 308 277 39 121 chr2 78064775 78064832 -172623022 + L2 LINE L2 3198 3258 -14 2362 91 0 3 chr2 78066907 78067204 -172620650 - AluSx SINE Alu -16 296 1 621 169 62 79 chr2 78067887 78068064 -172619790 - MER46A DNA MER2_type -60 176 3 * 1550 156 0 0 chr2 78067922 78068153 -172619701 + MER46A DNA MER2_type 1 231 -5 524 201 124 18 chr2 78068173 78068342 -172619512 + MER112 DNA MER1_type 74 260 0 194 88 0 29 chr2 78070932 78070966 -172616888 + (CAA)n Simple_repeat Simple_repeat 2 34 0 490 305 91 33 chr2 78070966 78071211 -172616643 - MIR SINE MIR -12 250 6 313 309 153 28 chr2 78071653 78072045 -172615809 - L2 LINE L2 -942 2372 1932 1039 160 70 0 chr2 78074084 78074271 -172613583 + MER3 DNA MER1_type 1 200 -9 2377 169 49 5 chr2 78074336 78074744 -172613110 - MSTB LTR MaLR 0 426 1 1402 255 67 28 chr2 78075121 78075685 -172612169 - L1ME4a LINE L1 -207 5914 5329 334 272 80 66 chr2 78075789 78076002 -172611852 - L1ME4a LINE L1 -1098 5048 4833 2376 101 0 0 chr2 78076117 78076423 -172611431 - AluY SINE Alu -5 306 1 2438 94 0 0 chr2 78076791 78077100 -172610754 - AluSg SINE Alu -1 309 1 281 83 0 0 chr2 78077201 78077237 -172610617 - U6 snRNA snRNA -71 36 1 23 0 0 0 chr2 78077307 78077330 -172610524 + AT_rich Low_complexity Low_complexity 1 23 0 918 258 127 45 chr2 78077765 78078488 -172609366 - L1ME4a LINE L1 -11 6110 5327 890 291 50 31 chr2 78078625 78079044 -172608810 + L2 LINE L2 2067 2493 -821 21 0 0 0 chr2 78079357 78079378 -172608476 + AT_rich Low_complexity Low_complexity 1 21 0 2115 104 0 60 chr2 78079508 78079824 -172608030 - AluSx SINE Alu -15 297 1 216 0 0 0 chr2 78079824 78079848 -172608006 + (A)n Simple_repeat Simple_repeat 1 24 0 1571 121 37 146 chr2 78079873 78080195 -172607659 + AluJo SINE Alu 1 287 -15 2168 113 0 3 chr2 78080198 78080536 -172607318 + AluSg SINE Alu 1 310 0 24 32 0 0 chr2 78080868 78080899 -172606955 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr2 78081198 78081219 -172606635 + (TCTG)n Simple_repeat Simple_repeat 4 24 0 408 257 53 104 chr2 78081836 78082072 -172605782 - MIR SINE MIR -4 258 34 442 296 163 52 chr2 78082362 78082919 -172604935 + L2 LINE L2 2017 2635 -679 459 303 67 6 chr2 78083715 78083880 -172603974 + MER5A DNA MER1_type 2 176 -13 531 302 57 28 chr2 78084948 78085160 -172602694 + MIR SINE MIR 7 224 -38 1319 282 197 4 chr2 78087002 78087697 -172600157 + L2 LINE L2 1858 2686 -628 427 99 14 14 chr2 78087715 78087786 -172600068 - L1MC5 LINE L1 -188 7773 7703 2280 110 0 0 chr2 78087787 78088096 -172599758 - AluSx SINE Alu -3 309 1 1510 199 84 13 chr2 78088125 78088517 -172599337 - L1MC5 LINE L1 -51 7910 7491 531 181 65 32 chr2 78092774 78092929 -172594925 + MIR SINE MIR 47 206 -56 2600 57 0 0 chr2 78093029 78093326 -172594528 + AluY SINE Alu 1 297 -14 1911 177 22 16 chr2 78093694 78094061 -172593793 + MER74A LTR ERVL 190 558 0 458 267 109 34 chr2 78095227 78095538 -172592316 - MLT1I LTR MaLR -2 407 49 1862 134 3 30 chr2 78095582 78095887 -172591967 + AluJb SINE Alu 7 303 -9 612 262 69 35 chr2 78096344 78096546 -172591308 - MLT1K LTR MaLR -233 355 147 6471 55 55 23 chr2 78096675 78096990 -172590864 + L1PA6 LINE L1 5209 5512 -642 2568 69 0 0 chr2 78096990 78097293 -172590561 - AluY SINE Alu -8 303 1 6471 55 55 23 chr2 78097293 78097895 -172589959 + L1PA6 LINE L1 5512 6154 0 824 301 126 22 chr2 78097901 78098460 -172589394 + L2 LINE L2 2702 3313 0 450 211 29 19 chr2 78098986 78099090 -172588764 - MIR SINE MIR -80 128 24 373 338 60 0 chr2 78099795 78099928 -172587926 - L2 LINE L2 -9 3263 3123 654 289 26 15 chr2 78100262 78100532 -172587322 + L1ME LINE L1 5502 5774 -347 1937 166 15 10 chr2 78100589 78101126 -172586728 + MER90 LTR ERV1 1 614 0 22 0 0 0 chr2 78101257 78101279 -172586575 + AT_rich Low_complexity Low_complexity 1 22 0 545 256 103 32 chr2 78103838 78104150 -172583704 - L1ME4a LINE L1 -23 6098 5765 291 243 80 103 chr2 78104188 78104499 -172583355 - L1ME4a LINE L1 -1980 4166 3863 901 247 84 27 chr2 78104588 78104884 -172582970 - L1MC4a LINE L1 -1882 5926 5614 249 276 148 35 chr2 78105210 78105413 -172582441 - MIR SINE MIR -17 245 20 1350 150 13 0 chr2 78105750 78105980 -172581874 - L1MC1 LINE L1 -361 5822 5591 21 0 0 0 chr2 78107027 78107048 -172580806 + AT_rich Low_complexity Low_complexity 1 21 0 2419 87 0 13 chr2 78107080 78107392 -172580462 - AluSx SINE Alu -4 308 1 1312 280 55 7 chr2 78107420 78107458 -172580396 - L1PB1 LINE L1 -140 5981 5946 1161 82 0 6 chr2 78107458 78107617 -172580237 + L1PB1 LINE L1 5993 6150 -1 1312 280 55 7 chr2 78107617 78108034 -172579820 - L1MC4a LINE L1 -175 5946 5504 236 277 0 53 chr2 78108309 78108403 -172579451 - MIR SINE MIR -65 197 109 824 284 44 0 chr2 78108824 78109028 -172578826 - MER115 DNA AcHobo -376 317 105 857 150 0 7 chr2 78109865 78110005 -172577849 - FLAM_C SINE Alu 0 143 5 435 362 58 17 chr2 78110026 78110319 -172577535 - L3 LINE CR1 -109 1468 1164 252 272 194 58 chr2 78110339 78111104 -172576750 - L2 LINE L2 -968 2346 1478 801 194 97 5 chr2 78111465 78111661 -172576193 - MIR SINE MIR -32 230 17 257 344 0 0 chr2 78112309 78112402 -172575452 + L2 LINE L2 1166 1258 -2056 626 218 58 21 chr2 78113063 78113251 -172574603 + L2 LINE L2 2221 2415 -899 421 265 19 68 chr2 78113875 78114037 -172573817 - L2 LINE L2 0 3313 3160 417 297 79 0 chr2 78115282 78115447 -172572407 + MIR SINE MIR 30 207 -55 732 288 100 26 chr2 78116088 78116468 -172571386 + L1ME4a LINE L1 5537 5970 -151 1780 171 0 10 chr2 78116468 78116761 -172571093 - AluJo SINE Alu -22 290 1 732 288 100 26 chr2 78116761 78116919 -172570935 + L1ME4a LINE L1 5970 6115 -6 455 310 118 5 chr2 78116995 78117198 -172570656 - MIR SINE MIR -6 256 31 29 0 0 0 chr2 78117941 78117970 -172569884 + AT_rich Low_complexity Low_complexity 1 29 0 1132 223 65 38 chr2 78117979 78118250 -172569604 + L1MC4 LINE L1 7640 7925 -117 246 105 0 0 chr2 78118250 78118288 -172569566 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 1132 223 65 38 chr2 78118288 78118388 -172569466 + L1MC4 LINE L1 7925 8021 -21 2965 242 71 13 chr2 78118422 78118480 -172569374 + L1MEc LINE L1 34 87 -6309 186 43 0 0 chr2 78118480 78118503 -172569351 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2965 242 71 13 chr2 78118503 78119228 -172568626 + L1MEc LINE L1 87 863 -5533 1814 221 86 27 chr2 78119225 78119777 -172568077 + L1ME1 LINE L1 439 1310 -5230 * 1285 189 8 4 chr2 78119778 78120016 -172567838 + AluJb SINE Alu 1 239 -73 1282 160 102 7 chr2 78120019 78120294 -172567560 + L1ME1 LINE L1 1627 1927 -4613 1035 192 41 121 chr2 78120553 78120891 -172566963 - MSTD LTR MaLR -49 347 37 3829 191 40 33 chr2 78121270 78121467 -172566387 + L1ME1 LINE L1 5679 5873 -687 2405 80 0 3 chr2 78121467 78121766 -172566088 + AluY SINE Alu 1 298 -13 3829 191 40 33 chr2 78121766 78122439 -172565415 + L1ME1 LINE L1 5873 6555 -5 2144 132 3 3 chr2 78122506 78122817 -172565037 - AluSx SINE Alu -1 311 1 496 258 58 58 chr2 78123823 78124083 -172563771 + MIR SINE MIR 2 261 -1 190 333 0 0 chr2 78124313 78124370 -172563484 - L2 LINE L2 -79 3193 3137 299 262 50 43 chr2 78124810 78124951 -172562903 + MIR SINE MIR 80 221 -41 607 222 102 6 chr2 78125049 78125225 -172562629 - MIR SINE MIR -7 255 63 646 234 82 0 chr2 78125326 78125510 -172562344 - MIR SINE MIR -57 205 7 2182 106 0 42 chr2 78127096 78127408 -172560446 - AluSx SINE Alu -13 299 1 535 316 71 5 chr2 78128549 78128745 -172559109 - MIR SINE MIR 0 262 54 348 331 128 43 chr2 78128871 78129665 -172558189 - L2 LINE L2 -556 2758 1897 343 317 28 0 chr2 78129666 78129811 -172558043 + L1ME4a LINE L1 5748 5896 -225 1291 234 117 32 chr2 78130409 78130848 -172557006 - L1MC5 LINE L1 -52 7909 7509 2359 194 18 51 chr2 78130848 78131398 -172556456 + LTR5 LTR ERVK 1 532 -437 2268 76 0 7 chr2 78131398 78131700 -172556154 + AluSp SINE Alu 14 313 0 1291 234 117 32 chr2 78131700 78131789 -172556065 - L1MC5 LINE L1 -451 7510 7334 2589 54 0 16 chr2 78131809 78132125 -172555729 - AluY SINE Alu 0 311 1 863 189 15 15 chr2 78132269 78132465 -172555389 + L1MD3 LINE L1 7790 7985 -10 21 0 0 0 chr2 78132628 78132649 -172555205 + AT_rich Low_complexity Low_complexity 1 21 0 1597 163 187 42 chr2 78133950 78134356 -172553498 - MLT1C LTR MaLR 0 467 3 337 329 70 7 chr2 78134584 78134727 -172553127 - MER5B DNA MER1_type -1 177 26 769 283 121 49 chr2 78135211 78135664 -172552190 + HAL1 LINE L1 371 856 -1651 1197 258 95 42 chr2 78135679 78136268 -172551586 + HAL1 LINE L1 1413 2032 -475 923 204 113 28 chr2 78136270 78136589 -172551265 + HAL1 LINE L1 1877 2222 -285 923 179 87 10 chr2 78136589 78136784 -172551070 + LTR50 LTR ERVL 1 210 -585 255 234 0 16 chr2 78136807 78136871 -172550983 - L2 LINE L2 0 3313 3251 1905 141 40 10 chr2 78137010 78137307 -172550547 - AluSx SINE Alu -6 306 1 2013 150 0 3 chr2 78137313 78137620 -172550234 - AluSx SINE Alu -4 308 3 35 0 0 0 chr2 78137622 78137657 -172550197 + AT_rich Low_complexity Low_complexity 1 35 0 1412 213 28 14 chr2 78137657 78137939 -172549915 - AluJo SINE Alu -26 286 1 1585 165 5 97 chr2 78137939 78138381 -172549473 - L1MA4 LINE L1 0 6482 6082 7252 170 40 18 chr2 78138384 78139917 -172547937 - L1MA4 LINE L1 -957 5371 3873 372 22 0 0 chr2 78139917 78139962 -172547892 + (TTG)n Simple_repeat Simple_repeat 2 46 0 7252 170 40 18 chr2 78139962 78140318 -172547536 - L1MA4 LINE L1 -2455 3873 3526 2321 98 0 16 chr2 78140318 78140625 -172547229 + AluSg SINE Alu 1 302 -8 7252 170 40 18 chr2 78140625 78140837 -172547017 - L1MA4 LINE L1 -2802 3526 3320 2125 135 0 22 chr2 78140837 78141155 -172546699 - AluSx SINE Alu -1 311 1 7252 170 40 18 chr2 78141155 78142161 -172545693 - L1MA4 LINE L1 -3008 3320 24 211 306 28 37 chr2 78142267 78142375 -172545479 - L2 LINE L2 -314 2958 2852 1172 136 68 57 chr2 78142542 78142806 -172545048 + L1MD3 LINE L1 7729 7995 0 216 0 0 0 chr2 78143457 78143481 -172544373 + (A)n Simple_repeat Simple_repeat 1 24 0 248 274 0 0 chr2 78143772 78143823 -172544031 + polypurine Low_complexity Low_complexity 1 51 0 24 0 0 0 chr2 78144307 78144331 -172543523 + AT_rich Low_complexity Low_complexity 1 24 0 2258 82 0 4 chr2 78144334 78144656 -172543198 + AluY SINE Alu 1 321 0 365 259 247 17 chr2 78144679 78144853 -172543001 + MIR SINE MIR 40 253 -9 627 291 80 0 chr2 78145547 78145746 -172542108 - LTR16A LTR ERVL -38 412 198 2535 261 153 36 chr2 78146859 78148435 -172539419 - HAL1 LINE L1 0 2507 748 597 204 145 0 chr2 78148438 78148590 -172539264 + MER20B DNA MER1_type 3 176 -607 439 176 69 10 chr2 78148598 78148700 -172539154 - MER53 DNA DNA 0 189 82 969 240 21 12 chr2 78148736 78148978 -172538876 + MER20B DNA MER1_type 198 441 -342 553 248 98 0 chr2 78149181 78149395 -172538459 + MER20B DNA MER1_type 516 750 -33 533 205 23 70 chr2 78149412 78149479 -172538375 + L1ME1 LINE L1 5840 5909 -257 1553 151 0 101 chr2 78149479 78149796 -172538058 + AluSx SINE Alu 1 285 -17 533 205 23 70 chr2 78149796 78149899 -172537955 + L1ME1 LINE L1 5909 6002 -164 706 191 19 13 chr2 78149910 78150067 -172537787 + L1MA10 LINE L1 6175 6332 -2 593 276 30 57 chr2 78150143 78150408 -172537446 - HAL1 LINE L1 -1777 730 473 468 302 132 0 chr2 78150904 78151109 -172536745 - MIR SINE MIR 0 262 31 393 287 22 55 chr2 78151337 78151518 -172536336 + MIR3 SINE MIR 30 204 -4 204 330 133 37 chr2 78152562 78152914 -172534940 + L2 LINE L2 1726 2111 -1203 2096 105 45 0 chr2 78153078 78153364 -172534490 + AluSx SINE Alu 1 299 -13 222 282 19 115 chr2 78153542 78153698 -172534156 + L2 LINE L2 2910 3050 -222 526 269 50 0 chr2 78153726 78153886 -172533968 + MIR SINE MIR 95 262 0 229 261 80 0 chr2 78154677 78154765 -172533089 - MIR SINE MIR -77 131 37 458 191 110 29 chr2 78155524 78155660 -172532194 + Charlie8 DNA MER1_type 2 148 -2269 503 284 96 20 chr2 78155966 78156163 -172531691 - MIR SINE MIR -20 242 31 525 279 42 0 chr2 78156694 78156859 -172530995 + MER91A DNA MER1_type 1 172 -24 225 229 52 73 chr2 78156862 78156958 -172530896 + MER91A DNA MER1_type 103 196 0 2320 97 0 0 chr2 78159150 78159476 -172528378 - AluSx SINE Alu 0 312 1 2517 213 70 58 chr2 78160789 78161478 -172526376 - MER21B LTR ERV1 -107 756 60 2342 95 0 0 chr2 78161671 78161965 -172525889 + AluSg SINE Alu 1 294 -16 298 260 22 0 chr2 78161989 78162075 -172525779 - MLT1J1 LTR MaLR -306 140 64 244 212 30 15 chr2 78162075 78162141 -172525713 - MLT1L LTR MaLR -533 82 16 2685 55 0 0 chr2 78162443 78162754 -172525100 + AluY SINE Alu 1 311 0 955 206 57 0 chr2 78163538 78163747 -172524107 + MIR SINE MIR 30 250 -12 306 315 62 62 chr2 78163920 78164180 -172523674 + HAL1 LINE L1 946 1205 -1302 2223 109 17 0 chr2 78164403 78164696 -172523158 + AluSg SINE Alu 1 298 -12 241 281 31 0 chr2 78165112 78165176 -172522678 + L1ME LINE L1 561 626 -5493 235 250 0 0 chr2 78165192 78165244 -172522610 + L1ME LINE L1 2396 2447 -3682 252 284 23 0 chr2 78165253 78165341 -172522513 + L1ME LINE L1 2912 3001 -3128 27 49 0 0 chr2 78165367 78165408 -172522446 + AT_rich Low_complexity Low_complexity 1 41 0 245 183 42 0 chr2 78165725 78165796 -172522058 + (TA)n Simple_repeat Simple_repeat 1 74 0 946 290 55 26 chr2 78165831 78166224 -172521630 + L1ME LINE L1 4716 5096 -1033 1616 169 91 62 chr2 78166224 78166444 -172521410 - MSTD LTR MaLR 0 396 159 1847 146 7 36 chr2 78166444 78166753 -172521101 - AluJb SINE Alu -12 300 1 1616 169 91 62 chr2 78166753 78166917 -172520937 - MSTD LTR MaLR -237 159 1 946 290 55 26 chr2 78166917 78166980 -172520874 + L1ME LINE L1 5096 5156 -973 2405 110 0 0 chr2 78166980 78167290 -172520564 + AluSq SINE Alu 3 312 -1 946 290 55 26 chr2 78167290 78167360 -172520494 + L1ME LINE L1 5156 5258 -871 249 243 57 0 chr2 78167374 78167444 -172520410 - L1ME LINE L1 -546 5624 5551 307 271 46 26 chr2 78167621 78167772 -172520082 + HAL1b LINE L1 66 219 -1129 * 546 159 111 40 chr2 78167768 78167887 -172519967 + L1ME LINE L1 5549 5679 -470 2313 114 0 0 chr2 78167887 78168184 -172519670 + AluSg SINE Alu 1 297 -13 28 48 0 0 chr2 78168314 78168356 -172519498 + AT_rich Low_complexity Low_complexity 1 42 0 697 171 0 0 chr2 78168536 78168641 -172519213 - MER58B DNA MER1_type -18 323 219 23 33 0 0 chr2 78169033 78169063 -172518791 + AT_rich Low_complexity Low_complexity 1 30 0 3970 59 4 0 chr2 78169121 78169616 -172518238 - L1PA5 LINE L1 0 6154 5658 267 246 18 0 chr2 78170000 78170057 -172517797 + GA-rich Low_complexity Low_complexity 1 58 0 247 283 71 0 chr2 78171001 78171100 -172516754 + L2 LINE L2 1602 1707 -1607 433 239 91 6 chr2 78171145 78171321 -172516533 + L2 LINE L2 3119 3309 -4 452 247 0 0 chr2 78171481 78171570 -172516284 - MER117 DNA MER1_type 0 197 109 2323 94 3 31 chr2 78172755 78173074 -172514780 + AluSg SINE Alu 1 310 0 249 245 170 0 chr2 78173505 78173599 -172514255 - MIR SINE MIR -141 121 12 251 268 134 0 chr2 78173819 78173916 -172513938 - MER20B DNA MER1_type -640 143 34 268 295 126 0 chr2 78173957 78174052 -172513802 + L2 LINE L2 3150 3256 -16 549 238 58 94 chr2 78175922 78176145 -172511709 - MER102b DNA MER1_type 0 341 127 238 158 53 35 chr2 78176517 78176574 -172511280 + MLT1G LTR MaLR 1 58 -509 2419 65 17 0 chr2 78176581 78176871 -172510983 + AluSp SINE Alu 1 295 -18 2205 84 16 10 chr2 78176896 78177024 -172510830 + L1MA1 LINE L1 5991 6117 -185 2098 115 10 10 chr2 78177024 78177319 -172510535 + AluSq SINE Alu 1 295 -18 2205 84 16 10 chr2 78177319 78177500 -172510354 + L1MA1 LINE L1 6117 6302 0 1028 251 133 25 chr2 78177524 78177959 -172509895 + MLT1G LTR MaLR 91 572 -18 226 299 0 35 chr2 78178558 78178645 -172509209 + L2 LINE L2 3189 3272 0 21 0 0 0 chr2 78179110 78179131 -172508723 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 78179178 78179201 -172508653 + AT_rich Low_complexity Low_complexity 1 23 0 520 291 51 5 chr2 78179907 78180103 -172507751 + MIR SINE MIR 52 256 -6 214 329 24 12 chr2 78180530 78180612 -172507242 + MIR SINE MIR 5 87 -175 222 116 0 0 chr2 78180642 78180685 -172507169 + (ATG)n Simple_repeat Simple_repeat 1 43 0 323 246 103 8 chr2 78180885 78180950 -172506904 - L1ME4a LINE L1 -1 6120 6063 2363 71 3 23 chr2 78180950 78181259 -172506595 + AluY SINE Alu 1 303 -8 323 246 103 8 chr2 78181259 78181319 -172506535 - L1ME4a LINE L1 -58 6063 5983 589 251 102 0 chr2 78181486 78181653 -172506201 + MER5A DNA MER1_type 5 188 -1 1850 181 0 23 chr2 78181674 78181983 -172505871 + AluJb SINE Alu 3 304 -8 2317 108 0 0 chr2 78181985 78182363 -172505491 + AluSg SINE Alu 1 378 0 226 379 68 44 chr2 78182978 78183361 -172504493 + L3 LINE CR1 35 426 -1151 * 281 200 0 0 chr2 78183355 78183410 -172504444 + L2 LINE L2 3259 3313 0 193 347 20 0 chr2 78183583 78183681 -172504173 + L3 LINE CR1 652 751 -826 476 250 41 41 chr2 78183717 78183913 -172503941 - L1ME4a LINE L1 -2 6119 5924 772 216 28 6 chr2 78184052 78184228 -172503626 - MIR SINE MIR -26 236 57 228 219 16 47 chr2 78184407 78184471 -172503383 - MER5B DNA MER1_type 0 178 117 2628 40 0 0 chr2 78184473 78184773 -172503081 + AluY SINE Alu 1 300 -11 2575 47 0 22 chr2 78184786 78185104 -172502750 + AluY SINE Alu 1 311 0 2493 86 0 0 chr2 78185121 78185422 -172502432 + AluSc SINE Alu 1 301 -8 194 282 14 14 chr2 78185441 78185512 -172502342 + MER5B DNA MER1_type 62 132 -46 2668 67 30 6 chr2 78185527 78185888 -172501966 - L1PA8 LINE L1 -3 6169 5800 1189 123 11 0 chr2 78186048 78186227 -172501627 + L1MB3 LINE L1 6001 6181 -2 1329 247 86 55 chr2 78186235 78186516 -172501338 + L1MC4a LINE L1 5174 5445 -701 1694 112 131 22 chr2 78186516 78186784 -172501070 + AluSg SINE Alu 1 297 -13 1329 247 86 55 chr2 78186784 78187022 -172500832 + L1MC4a LINE L1 5445 5193 -953 2164 113 3 3 chr2 78187022 78187323 -172500531 + AluSx SINE Alu 1 301 -11 1329 247 86 55 chr2 78187323 78187530 -172500324 + L1MC4a LINE L1 5192 5391 -755 2597 58 0 0 chr2 78187707 78188015 -172499839 + AluY SINE Alu 1 308 -3 331 239 192 23 chr2 78188819 78188949 -172498905 + MARNA DNA Mariner 258 409 -177 471 262 67 13 chr2 78190027 78190176 -172497678 + MIR3 SINE MIR 3 159 -49 265 265 83 45 chr2 78190177 78190309 -172497545 + MER5A DNA MER1_type 1 137 -52 236 257 86 0 chr2 78190771 78190841 -172497013 - L2 LINE L2 0 3272 3197 2073 141 36 33 chr2 78190981 78191344 -172496510 + THE1B LTR MaLR 1 364 0 340 294 32 8 chr2 78191721 78191847 -172496007 - L2 LINE L2 -218 3054 2926 1488 288 79 35 chr2 78192132 78193289 -172494565 - L1ME LINE L1 -4470 1791 530 833 336 41 17 chr2 78193531 78193816 -172494038 - L1ME LINE L1 -5607 463 163 2444 91 0 0 chr2 78193816 78194124 -172493730 - AluY SINE Alu -3 308 1 833 336 41 17 chr2 78194124 78194255 -172493599 - L1ME LINE L1 -5907 163 37 286 316 110 14 chr2 78195647 78195865 -172491989 - L2 LINE L2 -833 2481 2243 476 288 8 0 chr2 78196031 78196149 -172491705 + MIR SINE MIR 35 153 -55 2404 42 0 14 chr2 78196587 78196902 -172490952 - AluY SINE Alu 0 311 1 8381 163 41 22 chr2 78196964 78197093 -172490761 - L1PA16 LINE L1 -9 6157 6032 2607 61 0 0 chr2 78197093 78197404 -172490450 - AluY SINE Alu 0 311 1 8381 163 41 22 chr2 78197404 78199937 -172487917 - L1PA16 LINE L1 -134 6032 3444 1660 269 130 11 chr2 78200212 78200773 -172487081 - MLT2E LTR ERVL 0 628 1 2188 119 30 0 chr2 78201350 78201653 -172486201 - AluSx SINE Alu 0 312 1 1684 184 28 21 chr2 78201657 78201984 -172485870 - MER58B DNA MER1_type -12 329 1 1846 71 12 0 chr2 78202012 78202252 -172485602 - MER75B DNA T2_type 0 243 1 2198 59 59 0 chr2 78202269 78202541 -172485313 + AluSg SINE Alu 1 288 -22 2748 42 0 0 chr2 78202541 78202852 -172485002 + AluY SINE Alu 1 311 0 794 116 70 8 chr2 78202920 78203049 -172484805 - LTR7 LTR ERV1 -313 137 1 2627 56 0 0 chr2 78203526 78203831 -172484023 + AluY SINE Alu 1 305 -6 357 162 8 120 chr2 78203907 78204024 -172483830 + L1MB4 LINE L1 6076 6179 -1 1703 116 5 0 chr2 78204265 78204489 -172483365 - AluSx SINE Alu -87 225 1 234 0 0 0 chr2 78204550 78204576 -172483278 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7077 34 3 3 chr2 78204649 78205570 -172482284 - L1PA3 LINE L1 0 6155 5286 514 51 13 13 chr2 78205911 78205990 -172481864 + (TTTA)n Simple_repeat Simple_repeat 2 80 0 6754 60 19 49 chr2 78205990 78207954 -172479900 - SVA Other Other -520 1367 1 5666 27 0 0 chr2 78207960 78208626 -172479228 - L1P LINE L1 -779 5367 4702 1936 124 10 49 chr2 78208627 78208797 -172479057 - AluSx SINE Alu -17 295 141 2350 85 13 0 chr2 78208797 78209103 -172478751 - AluSp SINE Alu -2 311 2 1936 124 10 49 chr2 78209103 78209238 -172478616 - AluSx SINE Alu -171 141 2 611 267 23 0 chr2 78209478 78209650 -172478204 + MER5A DNA MER1_type 9 184 -5 771 244 117 79 chr2 78209915 78210053 -172477801 - L2 LINE L2 0 3313 3182 2234 94 0 70 chr2 78210053 78210384 -172477470 + AluSc SINE Alu 1 308 -1 771 244 117 79 chr2 78210384 78210517 -172477337 - L2 LINE L2 -131 3182 3055 2412 75 0 0 chr2 78210517 78210811 -172477043 + AluY SINE Alu 1 294 -17 2494 69 0 7 chr2 78210819 78211124 -172476730 + AluSx SINE Alu 1 303 -9 771 244 117 79 chr2 78211124 78211398 -172476456 - L2 LINE L2 -264 3049 2732 2167 196 83 8 chr2 78211398 78211868 -172475986 - MLT1D LTR MaLR 0 505 1 771 244 117 79 chr2 78211868 78211976 -172475878 - L2 LINE L2 -581 2732 2629 2181 133 7 65 chr2 78212051 78212464 -172475390 + MLT1B LTR MaLR 1 389 -1 188 247 157 34 chr2 78212469 78212558 -172475296 - L3 LINE CR1 -1123 454 355 659 136 34 0 chr2 78212606 78212724 -172475130 + L1ME1 LINE L1 5152 5273 -873 6153 142 19 3 chr2 78212731 78214455 -172473399 + L1PB3 LINE L1 4403 6153 -1 2702 211 73 15 chr2 78214413 78215095 -172472759 + L1ME1 LINE L1 5270 5991 -175 * 2213 58 72 0 chr2 78215124 78215401 -172472453 + AluSp SINE Alu 1 297 -16 833 228 33 5 chr2 78216000 78216184 -172471670 + MER5A DNA MER1_type 1 189 0 343 137 0 0 chr2 78216925 78216976 -172470878 - MER45C DNA AcHobo -1 952 902 572 260 91 126 chr2 78216993 78217389 -172470465 - MER45C DNA AcHobo -354 599 218 4807 182 61 29 chr2 78217455 78218153 -172469701 + MER45B DNA AcHobo 2 676 -905 2406 53 7 11 chr2 78218153 78218460 -172469394 + AluY SINE Alu 1 306 0 4807 182 61 29 chr2 78218460 78218528 -172469326 + MER45B DNA AcHobo 676 740 -841 2358 103 0 0 chr2 78218528 78218830 -172469024 + AluSg SINE Alu 2 303 -7 4807 182 61 29 chr2 78218830 78219068 -172468786 + MER45B DNA AcHobo 740 1040 0 559 262 82 61 chr2 78219267 78219451 -172468403 + L1ME4a LINE L1 5689 5868 -253 2238 67 18 7 chr2 78219451 78219753 -172468101 - AluY SINE Alu 0 305 1 559 262 82 61 chr2 78219753 78219829 -172468025 + L1ME4a LINE L1 5868 5941 -180 2136 140 0 0 chr2 78219829 78220129 -172467725 + AluSp SINE Alu 1 300 -13 559 262 82 61 chr2 78220129 78220278 -172467576 + L1ME4a LINE L1 5941 6109 -12 2404 84 7 0 chr2 78220353 78220652 -172467202 - AluSp SINE Alu -12 301 1 608 144 10 10 chr2 78220660 78220764 -172467090 + MLT2D LTR ERVL 88 191 -223 2468 60 0 17 chr2 78220777 78221077 -172466777 + AluY SINE Alu 1 295 -16 195 237 25 119 chr2 78221671 78221789 -172466065 - L2 LINE L2 -11 3261 3155 387 0 0 0 chr2 78221798 78221841 -172466013 + (CA)n Simple_repeat Simple_repeat 2 44 0 1643 95 0 0 chr2 78222973 78223194 -172464660 - L1PA12 LINE L1 -1 6167 5947 1881 229 55 39 chr2 78223273 78223550 -172464304 - LTR40a LTR ERVL 0 519 229 1931 150 3 0 chr2 78223550 78223843 -172464011 + AluJb SINE Alu 1 294 -18 1881 229 55 39 chr2 78223843 78224076 -172463778 - LTR40a LTR ERVL -290 229 1 1185 293 101 8 chr2 78225565 78226071 -172461783 + L2 LINE L2 2156 2708 -606 1260 200 118 23 chr2 78226074 78226379 -172461475 - MER2 DNA MER2_type -7 338 5 2171 135 42 3 chr2 78226392 78226725 -172461129 - MER7A DNA MER2_type 0 346 3 360 0 0 0 chr2 78226731 78226771 -172461083 + (CA)n Simple_repeat Simple_repeat 2 41 0 404 288 65 85 chr2 78226953 78227353 -172460501 + L2 LINE L2 2921 3312 -1 262 178 104 133 chr2 78228479 78228548 -172459306 - L1MC/D LINE L1 -1908 5900 5835 2337 110 0 0 chr2 78228548 78228848 -172459006 - AluSx SINE Alu -12 300 1 262 178 104 133 chr2 78228848 78228913 -172458941 - L1MC/D LINE L1 -1973 5835 5770 2525 181 4 6 chr2 78229047 78229521 -172458333 + L1PB3 LINE L1 5681 6153 -1 2729 204 79 5 chr2 78229528 78230161 -172457693 + L1ME1 LINE L1 5312 5991 -175 2213 58 72 0 chr2 78230190 78230467 -172457387 + AluSp SINE Alu 1 297 -16 833 228 33 5 chr2 78231066 78231250 -172456604 + MER5A DNA MER1_type 1 189 0 343 137 0 0 chr2 78231991 78232042 -172455812 - MER45C DNA AcHobo -1 952 902 572 260 91 126 chr2 78232059 78232455 -172455399 - MER45C DNA AcHobo -354 599 218 4801 181 60 30 chr2 78232521 78233219 -172454635 + MER45B DNA AcHobo 2 677 -904 2274 64 11 11 chr2 78233219 78233525 -172454329 + AluY SINE Alu 1 306 0 4801 181 60 30 chr2 78233525 78233594 -172454260 + MER45B DNA AcHobo 677 742 -839 2130 117 7 0 chr2 78233594 78233892 -172453962 + AluSg SINE Alu 4 303 -7 4801 181 60 30 chr2 78233892 78234130 -172453724 + MER45B DNA AcHobo 742 1040 0 426 224 58 46 chr2 78234303 78234507 -172453347 + L1ME4a LINE L1 5664 5868 -253 2223 67 18 7 chr2 78234514 78234816 -172453038 - AluY SINE Alu 0 305 1 8381 164 41 22 chr2 78234878 78235007 -172452847 - L1PA16 LINE L1 -9 6157 6032 2580 64 0 0 chr2 78235007 78235318 -172452536 - AluY SINE Alu 0 311 1 8381 164 41 22 chr2 78235318 78237851 -172450003 - L1PA16 LINE L1 -134 6032 3444 1660 269 130 11 chr2 78238126 78238687 -172449167 - MLT2E LTR ERVL 0 628 1 2188 119 30 0 chr2 78239264 78239567 -172448287 - AluSx SINE Alu 0 312 1 1684 184 28 21 chr2 78239571 78239898 -172447956 - MER58B DNA MER1_type -12 329 1 1846 71 12 0 chr2 78239926 78240166 -172447688 - MER75B DNA T2_type 0 243 1 2144 66 59 0 chr2 78240183 78240455 -172447399 + AluSg SINE Alu 1 288 -22 2748 42 0 0 chr2 78240455 78240766 -172447088 + AluY SINE Alu 1 311 0 801 116 70 8 chr2 78240834 78240963 -172446891 - LTR7 LTR ERV1 -313 137 1 249 243 57 0 chr2 78241545 78241615 -172446239 - L1ME LINE L1 -546 5624 5551 292 271 46 26 chr2 78241792 78241943 -172445911 + HAL1b LINE L1 66 219 -1129 * 538 159 111 40 chr2 78241939 78242058 -172445796 + L1ME LINE L1 5566 5696 -470 2182 114 0 0 chr2 78242058 78242355 -172445499 + AluSg SINE Alu 1 297 -13 28 48 0 0 chr2 78242485 78242527 -172445327 + AT_rich Low_complexity Low_complexity 1 42 0 596 133 0 0 chr2 78242707 78242790 -172445064 - MER58B DNA MER1_type -18 323 241 180 238 41 74 chr2 78243166 78243288 -172444566 + L2 LINE L2 3119 3236 -77 3960 59 4 0 chr2 78243289 78243784 -172444070 - L1PA5 LINE L1 0 6154 5658 267 246 18 0 chr2 78244168 78244225 -172443629 + GA-rich Low_complexity Low_complexity 1 58 0 270 287 43 35 chr2 78245168 78245283 -172442571 + L2 LINE L2 1602 1717 -1597 507 239 91 6 chr2 78245312 78245488 -172442366 + L2 LINE L2 3119 3309 -4 455 247 0 0 chr2 78245648 78245737 -172442117 - MER117 DNA MER1_type 0 197 109 2191 94 3 31 chr2 78246922 78247241 -172440613 + AluSg SINE Alu 1 310 0 332 287 149 46 chr2 78247571 78247766 -172440088 - MIR SINE MIR -36 226 12 260 268 134 0 chr2 78247986 78248083 -172439771 - MER20B DNA MER1_type -640 143 34 304 295 126 0 chr2 78248124 78248219 -172439635 + L2 LINE L2 3150 3256 -16 543 238 58 94 chr2 78250089 78250312 -172437542 - MER102b DNA MER1_type 0 341 127 229 228 18 0 chr2 78250684 78250741 -172437113 + MLT1G LTR MaLR 1 58 -509 2284 65 17 0 chr2 78250748 78251038 -172436816 + AluSp SINE Alu 1 295 -18 2190 84 16 10 chr2 78251063 78251191 -172436663 + L1MA1 LINE L1 5991 6117 -185 1971 115 10 10 chr2 78251191 78251486 -172436368 + AluSq SINE Alu 1 295 -18 2190 84 16 10 chr2 78251486 78251667 -172436187 + L1MA1 LINE L1 6117 6302 0 1058 253 133 25 chr2 78251691 78252126 -172435728 + MLT1G LTR MaLR 91 572 -18 257 299 0 35 chr2 78252725 78252812 -172435042 + L2 LINE L2 3189 3272 0 21 0 0 0 chr2 78253277 78253298 -172434556 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 78253345 78253368 -172434486 + AT_rich Low_complexity Low_complexity 1 23 0 611 305 63 9 chr2 78254047 78254270 -172433584 + MIR SINE MIR 22 256 -6 258 285 259 19 chr2 78254697 78254809 -172433045 + MIR SINE MIR 5 89 -173 222 116 0 0 chr2 78254809 78254852 -172433002 + (ATG)n Simple_repeat Simple_repeat 1 43 0 258 285 259 19 chr2 78254852 78254897 -172432957 + MIR SINE MIR 89 200 -62 318 246 103 8 chr2 78255052 78255117 -172432737 - L1ME4a LINE L1 -1 6120 6063 2236 71 3 23 chr2 78255117 78255426 -172432428 + AluY SINE Alu 1 303 -8 318 246 103 8 chr2 78255426 78255486 -172432368 - L1ME4a LINE L1 -58 6063 5983 661 246 102 0 chr2 78255653 78255820 -172432034 + MER5A DNA MER1_type 5 188 -1 1735 181 0 23 chr2 78255841 78256150 -172431704 + AluJb SINE Alu 3 304 -8 2138 114 0 0 chr2 78256152 78256530 -172431324 + AluSg SINE Alu 1 378 0 399 337 107 87 chr2 78257145 78257848 -172430006 + L3 LINE CR1 35 751 -826 459 250 41 41 chr2 78257884 78258080 -172429774 - L1ME4a LINE L1 -2 6119 5924 839 241 25 10 chr2 78258192 78258395 -172429459 - MIR SINE MIR 0 262 57 254 219 16 47 chr2 78258574 78258638 -172429216 - MER5B DNA MER1_type 0 178 117 2495 40 0 0 chr2 78258640 78258940 -172428914 + AluY SINE Alu 1 300 -11 2441 47 0 22 chr2 78258953 78259271 -172428583 + AluY SINE Alu 1 311 0 2306 69 3 7 chr2 78259288 78259592 -172428262 + AluSx SINE Alu 1 303 -9 811 261 127 21 chr2 78259600 78259866 -172427988 - L2 LINE L2 -275 3038 2724 2156 196 83 8 chr2 78259866 78260336 -172427518 - MLT1D LTR MaLR 0 505 1 811 261 127 21 chr2 78260336 78260444 -172427410 - L2 LINE L2 -589 2724 2629 2184 133 7 65 chr2 78260519 78260932 -172426922 + MLT1B LTR MaLR 1 389 -1 227 264 143 33 chr2 78260937 78261028 -172426826 - L3 LINE CR1 -1123 454 354 652 136 34 0 chr2 78261074 78261192 -172426662 + L1M4 LINE L1 5152 5273 -873 4719 162 26 6 chr2 78261199 78262457 -172425397 + L1P5 LINE L1 4403 5686 -468 235 216 0 0 chr2 78262557 78262594 -172425260 + MER30 DNA MER1_type 194 230 0 344 331 80 63 chr2 78262746 78263109 -172424745 - L1M4 LINE L1 -989 5157 4789 184 182 0 0 chr2 78263348 78263381 -172424473 - MIR SINE MIR -70 192 160 29 0 0 0 chr2 78263535 78263564 -172424290 + AT_rich Low_complexity Low_complexity 1 29 0 2148 112 3 0 chr2 78263586 78263889 -172423965 - AluSx SINE Alu -8 304 1 1552 154 55 7 chr2 78263899 78264172 -172423682 - AluJb SINE Alu -26 286 1 741 227 72 7 chr2 78264536 78264715 -172423139 - MLT1I LTR MaLR 0 409 244 605 226 36 7 chr2 78264739 78264876 -172422978 - MLT1I LTR MaLR -268 141 1 999 254 123 66 chr2 78265650 78265790 -172422064 + MLT1L LTR MaLR 3 134 -481 828 222 106 0 chr2 78265790 78265988 -172421866 - MER20 DNA MER1_type 0 219 1 999 254 123 66 chr2 78265988 78266423 -172421431 + MLT1L LTR MaLR 134 611 -4 618 176 17 11 chr2 78266816 78266949 -172420905 - MER5B DNA MER1_type -3 175 59 556 283 71 77 chr2 78267177 78267476 -172420378 - L1MC4a LINE L1 -1846 5962 5662 2295 76 0 3 chr2 78267476 78267777 -172420077 + AluY SINE Alu 1 300 -11 556 283 71 77 chr2 78267777 78267825 -172420029 - L1MC4a LINE L1 -2146 5662 5615 2288 100 6 0 chr2 78267825 78268136 -172419718 + AluSq SINE Alu 1 313 0 556 283 71 77 chr2 78268136 78268226 -172419628 - L1MC4a LINE L1 -2193 5615 5527 568 274 71 7 chr2 78268365 78268587 -172419267 - L1MC4a LINE L1 -694 5462 5284 225 0 0 0 chr2 78268736 78268761 -172419093 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1538 174 0 23 chr2 78269086 78269385 -172418469 - AluJo SINE Alu -20 292 1 273 128 0 0 chr2 78269413 78269452 -172418402 - MER5B DNA MER1_type -114 64 26 196 103 35 0 chr2 78269426 78269455 -172418399 + MER5A DNA MER1_type 138 167 -22 * 2226 70 0 33 chr2 78269491 78269793 -172418061 + AluY SINE Alu 5 296 -15 723 164 97 30 chr2 78269828 78269993 -172417861 - MER97a DNA MER1_type? -711 183 8 1806 119 0 0 chr2 78270431 78270691 -172417163 - AluSx SINE Alu -9 303 44 1167 322 72 29 chr2 78271305 78271820 -172416034 + LTR67 LTR ERVL 2 538 -19 2158 82 3 3 chr2 78272727 78273020 -172414834 - AluY SINE Alu -18 293 1 1901 143 4 0 chr2 78273535 78273849 -172414005 + AluSx SINE Alu 1 315 0 211 261 91 11 chr2 78273897 78273985 -172413869 - L2 LINE L2 -667 2647 2553 468 279 81 17 chr2 78274079 78274251 -172413603 - L2 LINE L2 -4 3309 3127 2173 138 10 37 chr2 78274297 78274646 -172413208 + MER66B LTR ERV1 1 404 -82 2252 40 20 30 chr2 78274646 78274944 -172412910 - AluY SINE Alu -15 296 2 2173 138 10 37 chr2 78274944 78275025 -172412829 + MER66B LTR ERV1 404 486 0 279 319 69 12 chr2 78275026 78275186 -172412668 - L2 LINE L2 -236 3036 2868 1163 289 98 59 chr2 78275204 78275931 -172411923 - L2 LINE L2 -732 2582 1828 770 153 8 0 chr2 78275958 78276076 -172411778 + FLAM_A SINE Alu 16 134 -8 444 228 72 14 chr2 78276592 78276680 -172411174 + MIR SINE MIR 15 96 -143 1738 145 0 14 chr2 78276680 78276963 -172410891 - AluJo SINE Alu -20 292 14 444 228 72 14 chr2 78276963 78277037 -172410817 + MIR SINE MIR 96 184 -55 31 26 0 0 chr2 78277352 78277390 -172410464 + GC_rich Low_complexity Low_complexity 1 38 0 220 226 38 0 chr2 78279036 78279089 -172408765 + G-rich Low_complexity Low_complexity 2 56 0 662 221 120 37 chr2 78280504 78280721 -172407133 - MIR SINE MIR -20 242 8 2174 103 0 0 chr2 78281110 78281411 -172406443 - AluSc SINE Alu -8 301 1 2410 68 0 0 chr2 78281966 78282275 -172405579 - AluY SINE Alu -2 309 1 2262 86 14 0 chr2 78283097 78283389 -172404465 - AluSc SINE Alu -13 296 1 2095 92 3 16 chr2 78283389 78283695 -172404159 - AluY SINE Alu -8 303 2 2372 57 0 38 chr2 78284024 78284342 -172403512 + AluY SINE Alu 2 307 -4 327 180 33 0 chr2 78284473 78284534 -172403320 - MER20 DNA MER1_type -5 214 152 973 149 4 180 chr2 78284618 78284879 -172402975 + MER20 DNA MER1_type 1 215 -4 218 263 0 18 chr2 78284925 78284982 -172402872 - MIR SINE MIR -102 106 51 654 256 17 80 chr2 78285415 78285653 -172402201 + MIR SINE MIR 33 255 -7 1141 123 94 21 chr2 78285653 78285909 -172401945 + MER47A DNA MER2_type 14 366 0 528 243 148 6 chr2 78287346 78287515 -172400339 - MIR SINE MIR -54 208 16 448 196 117 84 chr2 78287569 78287748 -172400106 - MIR3 SINE MIR -3 205 21 475 307 0 0 chr2 78287848 78287962 -172399892 + MER94 DNA DNA 20 133 -1 193 294 20 0 chr2 78288361 78288412 -172399442 - L2 LINE L2 -12 3301 3250 208 352 66 0 chr2 78288423 78288514 -172399340 - L2 LINE L2 -239 3033 2937 355 308 75 25 chr2 78288619 78288778 -172399076 + L2 LINE L2 3095 3261 -11 913 202 98 40 chr2 78289800 78290077 -172397777 - L1ME3A LINE L1 -79 6091 5799 721 187 60 13 chr2 78290095 78290245 -172397609 - AluJb SINE Alu -16 296 140 1430 182 0 86 chr2 78290833 78291146 -172396708 + AluJo SINE Alu 1 286 -26 704 98 33 33 chr2 78291787 78291909 -172395945 - L1MB4 LINE L1 -6 6174 6053 382 235 25 59 chr2 78293612 78293731 -172394123 - MER5B DNA MER1_type -58 120 6 423 303 67 63 chr2 78293744 78293982 -172393872 + L3 LINE CR1 1314 1552 -25 403 324 34 0 chr2 78295472 78295620 -172392234 + MIR SINE MIR 110 262 0 310 158 92 13 chr2 78296043 78296119 -172391735 + AluJ SINE Alu 55 136 -166 315 247 11 22 chr2 78296284 78296373 -172391481 - L2 LINE L2 -18 3254 3167 1929 127 0 0 chr2 78296672 78297003 -172390851 + AluSx SINE Alu 1 331 0 730 157 144 13 chr2 78297003 78297156 -172390698 + AluJ SINE Alu 132 304 -8 25 51 0 0 chr2 78297527 78297566 -172390288 + AT_rich Low_complexity Low_complexity 1 39 0 272 250 19 23 chr2 78297594 78297699 -172390155 - L1P5 LINE L1 -285 5869 5762 1968 69 44 0 chr2 78298446 78298721 -172389133 - AluSp SINE Alu -23 290 4 340 174 58 0 chr2 78298725 78298794 -172389060 - MER103 DNA DNA -60 106 34 471 85 0 0 chr2 78298816 78298875 -172388979 - Alu SINE Alu -12 288 230 622 109 22 0 chr2 78298877 78298969 -172388885 - AluSc SINE Alu -214 95 2 593 297 34 0 chr2 78300044 78300219 -172387635 - MIR SINE MIR -30 232 52 226 293 43 52 chr2 78300568 78300684 -172387170 + MIR3 SINE MIR 41 155 -53 265 327 24 4 chr2 78300816 78300947 -172386907 + L1ME4a LINE L1 5586 5720 -450 907 131 0 48 chr2 78300947 78301115 -172386739 + AluSg/x SINE Alu 153 312 0 192 255 153 20 chr2 78301814 78301912 -172385942 + MIR SINE MIR 36 146 -116 1531 75 218 4 chr2 78302841 78303080 -172384774 + AluY SINE Alu 1 290 -21 2260 188 73 42 chr2 78303091 78303131 -172384723 - L1ME2 LINE L1 -62 6102 6065 3677 123 37 52 chr2 78303131 78303784 -172384070 + L1PB4 LINE L1 5514 6156 0 2260 188 73 42 chr2 78303784 78304345 -172383509 - L1ME2 LINE L1 -99 6065 5482 1916 106 46 3 chr2 78304582 78304865 -172382989 + AluSx SINE Alu 1 295 -17 420 333 116 10 chr2 78304886 78305084 -172382770 - MIR SINE MIR -10 252 34 219 114 0 0 chr2 78305463 78305498 -172382356 + (ATG)n Simple_repeat Simple_repeat 2 36 0 552 336 43 5 chr2 78305518 78305726 -172382128 - MIR SINE MIR -33 229 14 180 290 65 0 chr2 78306176 78306238 -172381616 - MIR SINE MIR -22 240 175 219 139 0 0 chr2 78306239 78306275 -172381579 + (TG)n Simple_repeat Simple_repeat 2 37 0 362 250 56 56 chr2 78306319 78306463 -172381391 - MIR SINE MIR -97 165 22 645 182 0 0 chr2 78307428 78307527 -172380327 - MER81 DNA DNA -15 99 1 2030 137 0 0 chr2 78307943 78308243 -172379611 - AluSx SINE Alu -12 300 1 342 291 51 29 chr2 78308283 78308458 -172379396 - MIR SINE MIR -71 191 13 402 284 157 10 chr2 78309290 78309494 -172378360 - MIR SINE MIR -3 259 26 1750 121 2 0 chr2 78310581 78310841 -172377013 + L1PB1 LINE L1 5760 6023 -128 467 260 154 12 chr2 78311829 78311998 -172375856 + MIR SINE MIR 50 242 -20 320 247 112 100 chr2 78312593 78312852 -172375002 + L1ME4a LINE L1 5811 6072 -49 797 216 24 42 chr2 78313284 78313428 -172374426 + MER3 DNA MER1_type 1 141 -68 1626 120 38 60 chr2 78313428 78313745 -172374109 - AluSx SINE Alu -2 310 1 797 216 24 42 chr2 78313745 78313813 -172374041 + MER3 DNA MER1_type 141 209 0 189 0 0 0 chr2 78313991 78314012 -172373842 + (T)n Simple_repeat Simple_repeat 1 21 0 743 136 47 94 chr2 78314513 78314704 -172373150 - MER5A DNA MER1_type -1 188 7 404 287 64 24 chr2 78315520 78315720 -172372134 - MIR SINE MIR -49 159 5 1743 179 61 6 chr2 78316200 78316530 -172371324 - MER7A DNA MER2_type 0 346 1 240 163 0 0 chr2 78317163 78317206 -172370648 + GA-rich Low_complexity Low_complexity 1 43 0 2316 80 0 0 chr2 78318764 78319065 -172368789 - AluSx SINE Alu -11 301 1 309 185 0 0 chr2 78321841 78321906 -172365948 + (TG)n Simple_repeat Simple_repeat 1 65 0 335 241 224 0 chr2 78322964 78323080 -172364774 - MER5A DNA MER1_type 0 189 48 560 99 44 0 chr2 78323412 78323503 -172364351 + LTR48B-int LTR ERV1 3178 3272 -3059 615 217 1 10 chr2 78323555 78323774 -172364080 + LTR48B-int LTR ERV1 3264 3450 -2881 602 197 24 40 chr2 78323959 78324160 -172363694 + LTR48B-int LTR ERV1 1726 2490 -2381 486 205 0 0 chr2 78324305 78324388 -172363466 - AluJ/FLAM SINE Alu -228 84 2 543 202 46 64 chr2 78324395 78324724 -172363130 + LTR48B-int LTR ERV1 1981 3728 -2603 1142 174 63 57 chr2 78324730 78325064 -172362790 + LTR48B-int LTR ERV1 3703 4038 -2293 2105 116 7 0 chr2 78325064 78325366 -172362488 - AluSx SINE Alu -8 304 1 3232 97 9 0 chr2 78325367 78325812 -172362042 - MER41B LTR ERV1 -186 449 1 893 150 55 40 chr2 78325836 78326036 -172361818 + LTR48B-int LTR ERV1 5898 6100 -231 2493 221 73 10 chr2 78326184 78326785 -172361069 + LTR48B LTR ERV1 1 639 -5 1329 158 87 111 chr2 78327229 78327690 -172360164 - LTR7 LTR ERV1 0 450 1 474 344 84 20 chr2 78327690 78328237 -172359617 - L1ME3 LINE L1 -322 5840 5259 1666 172 0 13 chr2 78328600 78328914 -172358940 - AluSg SINE Alu 0 310 1 850 212 78 53 chr2 78329975 78330220 -172357634 - MIR SINE MIR 0 262 12 1144 221 18 0 chr2 78330235 78330452 -172357402 + MER58A DNA MER1_type 4 224 0 455 274 67 64 chr2 78330505 78330721 -172357133 + MIR SINE MIR 2 221 -41 814 154 0 0 chr2 78331708 78331825 -172356029 + FLAM_C SINE Alu 2 118 -25 775 277 41 21 chr2 78331847 78332089 -172355765 - MIR SINE MIR -10 252 6 282 263 116 21 chr2 78332841 78332936 -172354918 - MER103 DNA DNA -49 117 14 292 297 110 6 chr2 78332980 78333162 -172354692 + L1ME LINE L1 5669 5869 -252 22 0 0 0 chr2 78333334 78333356 -172354498 + AT_rich Low_complexity Low_complexity 1 22 0 643 288 80 13 chr2 78334328 78334554 -172353300 + MIR SINE MIR 9 249 -13 270 308 122 0 chr2 78334942 78335049 -172352805 - L2 LINE L2 -6 3307 3188 369 0 0 0 chr2 78335072 78335113 -172352741 + (CA)n Simple_repeat Simple_repeat 2 42 0 1106 78 0 0 chr2 78335113 78335254 -172352600 - MER41A LTR ERV1 -113 441 301 362 301 21 42 chr2 78335272 78335415 -172352439 - L2 LINE L2 -188 3125 2986 340 240 2 0 chr2 78336427 78336503 -172351351 - Charlie8 DNA MER1_type -990 1427 1361 217 146 36 18 chr2 78338697 78338752 -172349102 + CT-rich Low_complexity Low_complexity 2 57 0 753 259 80 8 chr2 78338979 78339230 -172348624 - L1ME3A LINE L1 -219 5951 5683 191 289 8 83 chr2 78339691 78339812 -172348042 + MIR SINE MIR 18 129 -133 22 35 0 0 chr2 78340909 78340938 -172346916 + AT_rich Low_complexity Low_complexity 1 29 0 405 254 134 19 chr2 78343110 78343321 -172344533 + L1ME LINE L1 5489 5729 -392 534 203 101 7 chr2 78343360 78343498 -172344356 - LTR33A LTR ERVL -8 515 365 477 225 94 14 chr2 78343578 78343716 -172344138 - LTR33A LTR ERVL -342 181 33 1753 154 146 31 chr2 78344246 78344630 -172343224 + MSTA LTR MaLR 1 428 0 1113 166 36 27 chr2 78344786 78345009 -172342845 + LTR48B LTR ERV1 4 228 -416 810 196 15 50 chr2 78344991 78345190 -172342664 + LTR29 LTR ERV1 137 328 -294 * 1291 193 4 24 chr2 78345290 78345539 -172342315 + LTR49-int LTR ERV1 7 250 -6081 385 205 0 13 chr2 78345591 78345669 -172342185 + LTR49-int LTR ERV1 844 920 -5411 280 233 0 0 chr2 78345826 78345886 -172341968 + LTR49-int LTR ERV1 1119 1178 -5153 421 217 0 0 chr2 78345910 78345979 -172341875 + tRNA-Glu-GAG tRNA tRNA 7 75 0 262 216 21 52 chr2 78346051 78346148 -172341706 + LTR49-int LTR ERV1 1288 1381 -4950 1639 237 35 43 chr2 78346459 78346969 -172340885 - L2 LINE L2 -1693 1621 1116 510 167 135 24 chr2 78346971 78347097 -172340757 + LTR41 LTR ERVL 2 141 -632 906 210 21 109 chr2 78347211 78347540 -172340314 + LTR41 LTR ERVL 464 763 -10 240 342 70 43 chr2 78347588 78347775 -172340079 + L2 LINE L2 1598 1789 -1525 284 295 36 53 chr2 78347900 78348121 -172339733 + MLT1H LTR MaLR 79 297 -112 1631 168 40 79 chr2 78348459 78348863 -172338991 - MLT1B LTR MaLR 0 390 3 650 198 57 21 chr2 78349560 78349736 -172338118 + MLT1A2 LTR MaLR 14 176 -198 326 61 20 0 chr2 78349738 78349787 -172338067 + (TC)n Simple_repeat Simple_repeat 2 51 0 831 193 70 6 chr2 78349814 78349985 -172337869 + MLT1A2 LTR MaLR 189 370 -4 21 0 0 0 chr2 78349987 78350008 -172337846 + AT_rich Low_complexity Low_complexity 1 21 0 372 235 0 0 chr2 78350050 78350118 -172337736 + L2 LINE L2 3203 3270 -2 2567 154 9 30 chr2 78351394 78351829 -172336025 - Tigger2a DNA MER2_type -5 429 4 539 275 84 74 chr2 78351850 78352308 -172335546 + L1MC4 LINE L1 7525 7990 -52 1177 84 0 7 chr2 78352308 78352463 -172335391 - L1PA8 LINE L1 -13 6159 6006 539 275 84 74 chr2 78352463 78352517 -172335337 + L1MC4 LINE L1 7990 8042 0 252 267 35 60 chr2 78352637 78352753 -172335101 + MIR3 SINE MIR 92 204 -4 225 0 0 0 chr2 78352847 78352872 -172334982 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 206 330 50 10 chr2 78353026 78353126 -172334728 - L2 LINE L2 -11 3302 3199 2242 113 0 0 chr2 78353561 78353872 -172333982 + AluSx SINE Alu 1 311 -1 381 43 0 0 chr2 78354466 78354513 -172333341 + (CA)n Simple_repeat Simple_repeat 2 48 0 225 196 0 0 chr2 78355121 78355177 -172332677 + (CA)n Simple_repeat Simple_repeat 2 57 0 198 0 0 0 chr2 78358425 78358447 -172329407 + (TG)n Simple_repeat Simple_repeat 1 22 0 231 297 45 39 chr2 78359368 78359523 -172328331 + L2 LINE L2 3115 3270 -43 1548 173 91 63 chr2 78359581 78359968 -172327886 - MLT1F LTR MaLR -1 541 161 242 174 0 0 chr2 78360103 78360149 -172327705 - MER53 DNA DNA -141 48 3 * 243 229 21 0 chr2 78360149 78360190 -172327664 - MER20 DNA MER1_type -177 42 1 751 284 80 53 chr2 78360190 78360556 -172327298 - L1M4 LINE L1 -1806 4340 3950 1407 172 144 6 chr2 78360556 78360875 -172326979 - MLT1A1 LTR MaLR 0 365 3 751 284 80 53 chr2 78360875 78361107 -172326747 - L1M4 LINE L1 -2196 3950 3726 2703 71 17 3 chr2 78361114 78361464 -172326390 - THE1A LTR MaLR 0 355 1 11724 91 19 2 chr2 78361465 78363009 -172324845 - THE1A-int LTR MaLR -1 1579 10 2424 64 32 10 chr2 78363014 78363137 -172324717 - THE1A LTR MaLR -35 320 201 2109 128 7 0 chr2 78363137 78363443 -172324411 + AluSg SINE Alu 1 308 -2 2424 64 32 10 chr2 78363443 78363632 -172324222 - THE1A LTR MaLR -154 201 1 414 299 115 32 chr2 78363663 78364001 -172323853 - L1M4 LINE L1 -2451 3695 3330 * 930 240 190 40 chr2 78363987 78364507 -172323347 - L1MC5 LINE L1 -30 7931 7334 499 265 122 16 chr2 78364513 78364702 -172323152 + LTR1 LTR ERV1 28 236 -549 678 244 133 29 chr2 78364755 78365034 -172322820 + LTR1B LTR ERV1 311 618 -208 263 261 43 43 chr2 78365118 78365233 -172322621 + LTR28 LTR ERV1 905 1019 -1 2371 84 0 3 chr2 78365395 78365705 -172322149 - AluSg SINE Alu -1 309 1 309 239 97 6 chr2 78365713 78365889 -172321965 - L1M4 LINE L1 -2884 3262 3071 750 291 108 18 chr2 78365905 78366238 -172321616 - L1M4 LINE L1 -3126 3020 2658 267 264 0 14 chr2 78366271 78366343 -172321511 + L1ME4a LINE L1 5981 6051 -70 203 244 93 35 chr2 78366490 78366540 -172321314 + MIR3 SINE MIR 101 160 -48 1961 128 0 0 chr2 78366540 78366858 -172320996 + AluSx SINE Alu 1 318 0 203 244 93 35 chr2 78366858 78366892 -172320962 + MIR3 SINE MIR 160 191 -17 1528 192 7 7 chr2 78368021 78368312 -172319542 - AluJb SINE Alu -21 291 1 1418 245 92 10 chr2 78368316 78368716 -172319138 - L2 LINE L2 -534 2780 2348 3003 208 123 58 chr2 78368718 78369889 -172317965 + L1MC5 LINE L1 6663 7909 -52 224 229 33 16 chr2 78369898 78369959 -172317895 + A-rich Low_complexity Low_complexity 4 65 0 928 298 83 34 chr2 78369959 78370781 -172317073 - L2 LINE L2 -882 2432 1571 3063 230 188 37 chr2 78371932 78372694 -172315160 - L2 LINE L2 -50 3263 2617 931 260 85 31 chr2 78372694 78372724 -172315130 + MLT1I LTR MaLR 1 28 -381 2090 124 3 0 chr2 78372724 78373031 -172314823 - AluSg SINE Alu -2 308 1 931 260 85 31 chr2 78373031 78373388 -172314466 + MLT1I LTR MaLR 28 409 0 3063 230 188 37 chr2 78373388 78374218 -172313636 - L2 LINE L2 -696 2617 1432 324 250 31 10 chr2 78374527 78374623 -172313231 + MIR SINE MIR 136 233 -29 319 338 128 35 chr2 78374694 78375141 -172312713 + L2 LINE L2 2728 3233 -39 1736 96 0 12 chr2 78375314 78375563 -172312291 - AluSx SINE Alu -66 246 1 1846 98 0 0 chr2 78376042 78376306 -172311548 - AluY SINE Alu -16 295 32 430 259 115 11 chr2 78376310 78376484 -172311370 - MIR SINE MIR -40 222 31 356 330 36 0 chr2 78376583 78376695 -172311159 - L2 LINE L2 -19 3294 3179 1626 170 3 11 chr2 78377535 78377817 -172310037 + AluJo SINE Alu 1 280 -32 642 200 22 22 chr2 78377868 78378003 -172309851 - MER45A DNA AcHobo -34 144 10 414 0 0 0 chr2 78378122 78378168 -172309686 + (CATCC)n Simple_repeat Simple_repeat 2 47 0 349 261 81 23 chr2 78378461 78378607 -172309247 - MIR SINE MIR -32 176 20 2027 126 20 0 chr2 78378951 78379253 -172308601 - AluSg SINE Alu -2 308 1 2121 113 0 0 chr2 78379349 78379642 -172308212 - AluSx SINE Alu -16 296 4 30 0 0 0 chr2 78379703 78379733 -172308121 + AT_rich Low_complexity Low_complexity 1 30 0 685 254 33 67 chr2 78379771 78380101 -172307753 + L1MC5 LINE L1 7607 7925 -36 600 291 117 3 chr2 78380650 78380949 -172306905 + MER115 DNA AcHobo 38 370 -323 1997 125 0 28 chr2 78381876 78382055 -172305799 - AluSp SINE Alu -1 312 144 2301 82 0 0 chr2 78382055 78382358 -172305496 - AluY SINE Alu -8 303 1 1997 125 0 28 chr2 78382358 78382499 -172305355 - AluSp SINE Alu -169 144 1 1109 230 375 5 chr2 78382596 78383175 -172304679 + LTR50 LTR ERVL 1 793 -2 340 242 0 0 chr2 78384030 78384096 -172303758 - L2 LINE L2 0 3272 3207 182 222 22 0 chr2 78384142 78384187 -172303667 - L2 LINE L2 -251 3062 3017 1487 218 149 44 chr2 78384187 78384642 -172303212 - MLT1G1 LTR MaLR 0 595 93 1859 287 149 16 chr2 78384711 78385572 -172302282 - L2 LINE L2 -340 2974 2000 188 302 19 0 chr2 78385570 78385623 -172302231 + L3 LINE CR1 1523 1576 -1 * 226 314 107 0 chr2 78387178 78387299 -172300555 - L1M4 LINE L1 -3347 2799 2666 205 296 0 0 chr2 78387877 78387948 -172299906 + T-rich Low_complexity Low_complexity 6 76 0 347 258 71 58 chr2 78388049 78388274 -172299580 - HAL1b LINE L1 -437 911 684 4031 117 10 3 chr2 78388475 78389084 -172298770 + L1P LINE L1 1457 2069 -4077 1178 92 5 22 chr2 78389068 78389253 -172298601 + L1P LINE L1 1426 1607 -4539 * 1540 116 11 37 chr2 78389234 78389502 -172298352 + L1P LINE L1 2036 2296 -3850 1954 78 60 3 chr2 78389502 78389784 -172298070 + MER11B LTR ERVK 1 298 -938 2998 286 52 48 chr2 78391116 78392317 -172295537 - HERV3 LTR ERV1 -4101 4325 3120 6922 86 130 11 chr2 78392463 78393491 -172294363 - L1P LINE L1 -4994 1152 2 755 202 16 44 chr2 78393688 78393871 -172293983 - MLT1C LTR MaLR -289 178 1 1625 181 53 0 chr2 78394087 78394369 -172293485 - AluSq SINE Alu -6 307 11 212 293 150 30 chr2 78395529 78395662 -172292192 + L2 LINE L2 3130 3278 -35 22 35 0 0 chr2 78395662 78395691 -172292163 + AT_rich Low_complexity Low_complexity 1 29 0 1811 159 11 0 chr2 78395740 78396023 -172291831 - AluSg SINE Alu -19 291 6 1240 243 88 36 chr2 78396515 78396992 -172290862 - MLT2B3 LTR ERVL -52 502 1 1294 237 29 7 chr2 78397290 78397569 -172290285 + AluJb SINE Alu 1 285 -27 980 58 8 0 chr2 78398051 78398172 -172289682 - AluSq/x SINE Alu -191 122 1 3960 79 13 1 chr2 78398879 78399877 -172287977 - L1P3 LINE L1 -351 5803 4797 415 86 0 0 chr2 78400173 78400231 -172287623 + MSTC LTR MaLR 1 58 -370 637 98 0 20 chr2 78400241 78400343 -172287511 - L1P4 LINE L1 -436 5738 5639 842 187 114 14 chr2 78400540 78400759 -172287095 - LOR1a LTR ERV1 0 497 257 584 215 15 0 chr2 78400755 78400890 -172286964 - LOR1b LTR ERV1 -290 171 35 * 1748 179 7 3 chr2 78400892 78401177 -172286677 + AluSx SINE Alu 1 286 -26 55 16 0 0 chr2 78401187 78401249 -172286605 + AT_rich Low_complexity Low_complexity 1 62 0 260 115 39 39 chr2 78401252 78401330 -172286524 + A-rich Low_complexity Low_complexity 2 79 0 265 152 0 0 chr2 78401355 78401401 -172286453 - LOR1b LTR ERV1 -415 46 1 668 274 42 11 chr2 78401923 78402113 -172285741 + MER8 DNA MER2_type 8 203 -36 769 296 8 94 chr2 78402644 78403016 -172284838 + LTR40a LTR ERVL 180 519 0 231 36 0 0 chr2 78403179 78403207 -172284647 + (TG)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr2 78403827 78403856 -172283998 + AT_rich Low_complexity Low_complexity 1 29 0 267 31 0 0 chr2 78404475 78404520 -172283334 + (GGAA)n Simple_repeat Simple_repeat 1 77 0 267 31 0 0 chr2 78404520 78404552 -172283302 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 1836 169 0 20 chr2 78404581 78404883 -172282971 - AluSg SINE Alu -14 296 1 1600 159 64 27 chr2 78405151 78405446 -172282408 - AluSx SINE Alu -6 306 1 414 153 133 51 chr2 78406163 78406261 -172281593 + FLAM_C SINE Alu 15 120 -23 264 59 0 0 chr2 78406261 78406295 -172281559 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 333 268 68 63 chr2 78406326 78406516 -172281338 - L1MC4 LINE L1 -12 8030 7840 427 47 31 0 chr2 78407176 78407240 -172280614 - AluY SINE Alu -3 309 244 2703 189 47 62 chr2 78407244 78407992 -172279862 + Tigger2 DNA MER2_type 8 744 -1974 780 237 48 33 chr2 78408016 78408286 -172279568 + Tigger2 DNA MER2_type 2435 2708 -10 532 239 98 52 chr2 78409163 78409489 -172278365 + MLT1D LTR MaLR 5 345 -122 416 252 0 7 chr2 78409491 78409626 -172278228 + (TATATG)n Simple_repeat Simple_repeat 2 135 0 405 304 53 73 chr2 78410001 78410343 -172277511 - L2 LINE L2 -149 3164 2830 21 0 0 0 chr2 78410508 78410529 -172277325 + AT_rich Low_complexity Low_complexity 1 21 0 210 283 0 29 chr2 78410543 78410626 -172277228 + A-rich Low_complexity Low_complexity 2 134 0 220 287 96 0 chr2 78411279 78411373 -172276481 - MIR SINE MIR -71 137 35 183 280 8 17 chr2 78411492 78411610 -172276244 + GA-rich Low_complexity Low_complexity 1 117 0 197 196 20 0 chr2 78411791 78411842 -172276012 + GA-rich Low_complexity Low_complexity 3 54 0 180 179 0 0 chr2 78412268 78412307 -172275547 + CT-rich Low_complexity Low_complexity 2 40 0 2011 90 7 0 chr2 78412770 78413047 -172274807 - L1PA7 LINE L1 -6 6148 5870 338 123 117 0 chr2 78413930 78414012 -172273842 + MLT1B LTR MaLR 282 374 0 2082 132 3 3 chr2 78415692 78416003 -172271851 + AluY SINE Alu 1 311 0 21 0 0 0 chr2 78416003 78416024 -172271830 + AT_rich Low_complexity Low_complexity 1 21 0 231 36 0 0 chr2 78416024 78416052 -172271802 + (T)n Simple_repeat Simple_repeat 1 28 0 296 57 19 19 chr2 78416527 78416577 -172271277 - MER4B LTR ERV1 -240 370 321 304 139 111 14 chr2 78416577 78416649 -172271205 + MADE1 DNA Mariner 1 79 -1 * 1469 154 101 10 chr2 78416649 78416945 -172270909 - MER4B LTR ERV1 -287 323 1 558 200 0 32 chr2 78416977 78417162 -172270692 + (TA)n Simple_repeat Simple_repeat 2 180 0 354 236 40 23 chr2 78417218 78417392 -172270462 + (TA)n Simple_repeat Simple_repeat 1 177 0 5715 111 31 0 chr2 78417434 78417770 -172270084 - L1PA7 LINE L1 -2 6152 5828 1633 117 27 0 chr2 78417770 78417938 -172269916 - AluSp SINE Alu -17 296 119 369 0 0 0 chr2 78417938 78417979 -172269875 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1633 117 27 0 chr2 78417979 78418033 -172269821 - AluSp SINE Alu -194 119 68 5715 111 31 0 chr2 78418033 78418873 -172268981 - L1PA7 LINE L1 -326 5828 4944 2987 160 10 4 chr2 78418973 78419529 -172268325 - HERVH LTR ERV1 -2735 4250 3949 1943 115 9 6 chr2 78419553 78419876 -172267978 - HERVH LTR ERV1 -3718 3995 3672 990 228 9 18 chr2 78419912 78420131 -172267723 - MER21A LTR ERV1 -166 765 549 311 200 25 17 chr2 78420132 78420252 -172267602 + HERVH LTR ERV1 5850 5970 -1743 2668 133 40 13 chr2 78420293 78420872 -172266982 + MER4B LTR ERV1 8 779 0 671 176 21 20 chr2 78420872 78421191 -172266663 - MER21B LTR ERV1 -451 412 5 426 63 2 6 chr2 78421206 78421270 -172266584 + L1MB1 LINE L1 6108 6172 -8 324 264 0 96 chr2 78421407 78421488 -172266366 + L1MDb LINE L1 1257 1309 -5087 2828 15 3 0 chr2 78421488 78421813 -172266041 + L1PA3 LINE L1 5830 6155 0 324 264 0 96 chr2 78421813 78421909 -172265945 + L1MDb LINE L1 1309 1413 -4983 502 269 18 0 chr2 78421928 78422095 -172265759 + L1MDb LINE L1 1361 1530 -4878 * 1066 257 73 25 chr2 78422093 78422615 -172265239 + L1MDb LINE L1 2067 2613 -3974 1776 155 14 27 chr2 78422764 78423061 -172264793 - AluJb SINE Alu -13 299 7 4378 145 56 18 chr2 78423136 78424082 -172263772 - L1MB7 LINE L1 -59 6125 5144 755 186 0 0 chr2 78424084 78424202 -172263652 + FLAM_C SINE Alu 1 118 -25 1242 216 26 15 chr2 78424208 78424550 -172263304 - L1MB7 LINE L1 -981 5165 4820 366 209 18 9 chr2 78424532 78424642 -172263212 - L1MB7 LINE L1 -1733 4413 4303 * 320 194 45 0 chr2 78424642 78424709 -172263145 + MSTB LTR MaLR 1 70 -356 9907 155 20 29 chr2 78424710 78427949 -172259905 + L1PA15 LINE L1 13 3283 -3178 5208 132 36 24 chr2 78427950 78428160 -172259694 + L1PA15 LINE L1 5290 5496 -984 1819 138 42 39 chr2 78428160 78428471 -172259383 + AluSx SINE Alu 1 312 0 5208 132 36 24 chr2 78428471 78429411 -172258443 + L1PA15 LINE L1 5496 6436 -44 245 263 0 0 chr2 78429727 78429784 -172258070 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 660 176 0 78 chr2 78429799 78429941 -172257913 + MER93b LTR ERV1 1 131 -242 701 261 41 68 chr2 78430165 78430633 -172257221 - LTR1B LTR ERV1 -333 493 39 1107 138 107 13 chr2 78430644 78430869 -172256985 + MER93b LTR ERV1 128 373 0 1853 175 51 30 chr2 78431037 78431431 -172256423 - MER57A LTR ERV1 -1 402 1 204 40 0 0 chr2 78431754 78431779 -172256075 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 4219 79 0 5 chr2 78431930 78432486 -172255368 + MER41A LTR ERV1 2 554 0 1904 159 140 36 chr2 78432894 78433019 -172254835 + MER39 LTR ERV1 2 113 -594 3937 162 34 8 chr2 78433019 78433735 -172254119 - MER50 LTR ERV1 0 734 1 1904 159 140 36 chr2 78433735 78434016 -172253838 + MER39 LTR ERV1 113 363 -344 1703 153 64 7 chr2 78434016 78434179 -172253675 - AluJo SINE Alu -15 297 110 405 0 0 0 chr2 78434179 78434224 -172253630 + (TG)n Simple_repeat Simple_repeat 2 46 0 1703 153 64 7 chr2 78434224 78434341 -172253513 - AluJo SINE Alu -202 110 1 1904 159 140 36 chr2 78434341 78434549 -172253305 + MER39 LTR ERV1 363 707 0 423 260 83 78 chr2 78434612 78434816 -172253038 + MIR SINE MIR 58 262 0 662 201 212 16 chr2 78434874 78435302 -172252552 + Charlie1b DNA MER1_type 9 519 -4 1515 147 18 132 chr2 78437981 78438368 -172249486 + MER7A DNA MER2_type 2 342 -4 276 350 10 0 chr2 78438780 78438880 -172248974 - L2 LINE L2 -575 2739 2639 286 248 95 0 chr2 78439270 78439375 -172248479 - HAL1 LINE L1 -147 2360 2246 316 344 26 20 chr2 78439495 78439646 -172248208 - HAL1b LINE L1 -436 912 761 251 303 82 0 chr2 78439887 78440009 -172247845 - L1ME3A LINE L1 -52 6354 6223 809 241 139 71 chr2 78440095 78440736 -172247118 - L1ME3A LINE L1 -208 6198 5602 1751 154 54 7 chr2 78440736 78441034 -172246820 - AluSx SINE Alu 0 312 1 809 241 139 71 chr2 78441034 78442222 -172245632 - L1ME3A LINE L1 -804 5602 4242 2192 104 3 35 chr2 78442325 78442643 -172245211 - AluSx SINE Alu -4 308 1 419 293 77 24 chr2 78442755 78443222 -172244632 - L1ME3A LINE L1 -3515 2867 2376 204 204 0 37 chr2 78443249 78443303 -172244551 + T-rich Low_complexity Low_complexity 2 53 0 2035 137 10 19 chr2 78443634 78443948 -172243906 - AluSx SINE Alu -1 311 1 673 280 86 25 chr2 78443969 78444459 -172243395 - L1ME3A LINE L1 -4642 1921 1263 389 230 44 122 chr2 78444474 78444771 -172243083 - L1ME3A LINE L1 -5082 1300 918 308 375 83 11 chr2 78444820 78445097 -172242757 - L1MEd LINE L1 -5295 824 528 331 316 40 110 chr2 78445125 78445426 -172242428 - L1MEd LINE L1 -5714 405 126 294 225 106 80 chr2 78445572 78445723 -172242131 - HAL1 LINE L1 -1609 898 744 589 131 31 31 chr2 78447214 78447344 -172240510 - L1MB8 LINE L1 0 6178 6049 25027 27 3 0 chr2 78447349 78450937 -172236917 - L1PA3 LINE L1 0 6155 2559 544 170 9 27 chr2 78450940 78451052 -172236802 - L1MB8 LINE L1 -254 5930 5821 1015 190 26 5 chr2 78451058 78451253 -172236601 - L1MB3 LINE L1 -7 6176 5978 1596 236 59 3 chr2 78451453 78451888 -172235966 - L1MD3 LINE L1 -2 7806 7370 259 238 344 0 chr2 78451961 78452112 -172235742 - MER112 DNA MER1_type -15 245 43 1861 215 103 37 chr2 78452165 78452701 -172235153 + MLT1E2 LTR MaLR 56 626 0 2850 191 83 19 chr2 78452922 78453606 -172234248 - L1ME1 LINE L1 -28 6138 5411 2273 92 0 3 chr2 78454043 78454352 -172233502 - AluSx SINE Alu 0 308 1 208 274 113 0 chr2 78455293 78455355 -172232499 + MIR SINE MIR 8 76 -186 2597 55 0 0 chr2 78455419 78455730 -172232124 + AluY SINE Alu 1 311 0 780 194 42 0 chr2 78455743 78455887 -172231967 + MIR SINE MIR 91 240 -22 707 235 103 56 chr2 78456171 78456245 -172231609 + HAL1b LINE L1 866 935 -413 2405 100 0 0 chr2 78456245 78456554 -172231300 - AluSc SINE Alu 0 309 1 707 235 103 56 chr2 78456554 78456905 -172230949 + HAL1b LINE L1 935 1311 -37 373 284 95 7 chr2 78457563 78457711 -172230143 + MIR3 SINE MIR 3 163 -45 593 301 128 0 chr2 78457741 78457944 -172229910 - MIR SINE MIR -32 230 2 446 217 41 5 chr2 78458381 78458502 -172229352 + L1ME LINE L1 5571 5693 -471 1338 122 0 0 chr2 78458502 78458682 -172229172 + AluJb SINE Alu 1 180 -132 310 238 62 12 chr2 78458684 78458764 -172229090 - LTR8 LTR ERV1 -607 84 1 771 279 116 42 chr2 78460078 78460266 -172227588 - MLT1J LTR MaLR 0 511 338 999 164 4 108 chr2 78460266 78460497 -172227357 + MER3 DNA MER1_type 2 208 -1 771 279 116 42 chr2 78460497 78460784 -172227070 - MLT1J LTR MaLR -173 338 1 322 277 36 54 chr2 78460854 78460966 -172226888 + MIR SINE MIR 150 259 -3 340 268 125 94 chr2 78462464 78462856 -172224998 + L2 LINE L2 2826 3229 -43 331 206 28 37 chr2 78463008 78463115 -172224739 - L1ME4a LINE L1 -94 6027 5922 311 331 48 8 chr2 78463673 78463797 -172224057 - L1 LINE L1 -1098 5048 4920 1843 141 55 7 chr2 78463805 78464096 -172223758 - AluSx SINE Alu -7 305 1 15973 57 2 3 chr2 78464128 78466841 -172221013 + L1PA6 LINE L1 3399 6154 0 243 200 187 0 chr2 78466928 78467003 -172220851 - L1 LINE L1 -1295 4851 4763 1335 231 87 37 chr2 78467043 78467559 -172220295 - L1MC4 LINE L1 0 8042 7501 648 231 69 23 chr2 78467581 78467797 -172220057 - LTR33 LTR ERVL 0 521 296 426 214 153 0 chr2 78467858 78467989 -172219865 - LTR33 LTR ERVL -339 182 32 265 243 56 75 chr2 78468089 78468196 -172219658 - HAL1 LINE L1 -109 2398 2294 596 264 177 20 chr2 78468210 78468554 -172219300 - HAL1 LINE L1 -294 2213 1816 747 214 101 108 chr2 78468561 78468948 -172218906 + MLT1E2 LTR MaLR 1 384 -240 1160 261 69 15 chr2 78468952 78469343 -172218511 - MER66A LTR ERV1 -9 469 58 1072 221 51 28 chr2 78469422 78469675 -172218179 + MLT1E2 LTR MaLR 368 626 0 1950 139 20 93 chr2 78469766 78470218 -172217636 - Charlie1 DNA MER1_type 0 2761 2343 330 217 29 0 chr2 78470216 78470285 -172217569 - Charlie1 DNA MER1_type -2690 71 1 * 328 214 167 0 chr2 78470301 78470385 -172217469 + MER5A DNA MER1_type 9 106 -83 450 200 107 29 chr2 78470430 78470570 -172217284 - HAL1 LINE L1 -789 1718 1568 246 307 60 36 chr2 78470577 78470743 -172217111 - HAL1 LINE L1 -2032 475 306 352 244 116 30 chr2 78470866 78471030 -172216824 - L1MC4 LINE L1 -364 7678 7501 421 212 85 0 chr2 78471052 78471170 -172216684 - LTR33 LTR ERVL 0 521 394 402 299 103 5 chr2 78471465 78471689 -172216165 - L1 LINE L1 -1531 4615 4370 216 0 0 0 chr2 78471948 78471972 -172215882 + (T)n Simple_repeat Simple_repeat 1 24 0 1768 103 179 0 chr2 78472419 78472682 -172215172 + AluSx SINE Alu 1 310 -2 302 183 14 0 chr2 78474482 78474553 -172213301 + (TG)n Simple_repeat Simple_repeat 2 73 0 283 157 49 29 chr2 78474553 78474655 -172213199 + (TA)n Simple_repeat Simple_repeat 2 105 0 185 273 23 0 chr2 78474877 78474921 -172212933 - L2 LINE L2 -95 3177 3133 2417 84 0 3 chr2 78475130 78475428 -172212426 - AluSq SINE Alu -16 297 1 2546 163 61 5 chr2 78475754 78476165 -172211689 - MER61C LTR ERV1 0 434 1 1037 187 16 11 chr2 78476190 78476377 -172211477 + MER5A DNA MER1_type 2 189 0 727 220 27 20 chr2 78477466 78477616 -172210238 + MER5A DNA MER1_type 39 189 0 445 241 66 15 chr2 78477616 78477751 -172210103 - MIR SINE MIR -34 228 87 1148 246 90 50 chr2 78477753 78478337 -172209517 + MLT1H1 LTR MaLR 1 555 0 188 290 81 0 chr2 78478499 78478561 -172209293 - MIR SINE MIR 0 262 196 1049 252 100 17 chr2 78478561 78478981 -172208873 - L1 LINE L1 -3044 3102 2648 23 0 0 0 chr2 78479116 78479139 -172208715 + AT_rich Low_complexity Low_complexity 1 23 0 285 192 0 110 chr2 78479229 78479302 -172208552 + L2 LINE L2 3249 3313 0 467 248 72 8 chr2 78479378 78479503 -172208351 - MER91B DNA MER1_type -48 142 10 2022 231 26 15 chr2 78479826 78480366 -172207488 + L1M4 LINE L1 3474 4019 -2127 673 271 96 18 chr2 78480440 78480669 -172207185 - MIR SINE MIR -3 259 13 273 165 38 63 chr2 78480865 78480944 -172206910 - MER5B DNA MER1_type -68 110 34 603 268 102 64 chr2 78481124 78481545 -172206309 + MLT1J LTR MaLR 27 463 -48 335 344 124 56 chr2 78481579 78482006 -172205848 - L2 LINE L2 -9 3263 2808 457 278 83 29 chr2 78482071 78482276 -172205578 - L2 LINE L2 -559 2755 2540 2090 109 0 3 chr2 78482365 78482680 -172205174 - AluSx SINE Alu 0 314 1 2516 162 82 9 chr2 78483358 78483821 -172204033 - MLT1D LTR MaLR -7 498 2 461 262 0 0 chr2 78484019 78484103 -172203751 + L2 LINE L2 3136 3219 -53 1956 147 7 0 chr2 78484151 78484444 -172203410 - AluSx SINE Alu -17 295 1 834 282 144 29 chr2 78484495 78484938 -172202916 + MLT1L LTR MaLR 120 613 -2 2127 85 0 70 chr2 78486629 78486945 -172200909 + AluSc SINE Alu 1 294 -15 585 333 33 12 chr2 78486964 78487297 -172200557 + L1ME4a LINE L1 5530 5869 -252 469 222 68 8 chr2 78488272 78488389 -172199465 + MLT1B LTR MaLR 1 124 -266 2454 66 3 3 chr2 78488497 78488800 -172199054 - AluY SINE Alu -8 303 1 1060 203 8 95 chr2 78488812 78489053 -172198801 + MLT1B LTR MaLR 147 374 -8 2191 102 0 3 chr2 78489147 78489463 -172198391 + AluSx SINE Alu 1 315 0 646 267 113 25 chr2 78489494 78489734 -172198120 - MIR SINE MIR 0 262 2 1760 124 91 0 chr2 78490294 78490569 -172197285 + AluSx SINE Alu 1 300 -12 8752 149 27 19 chr2 78491578 78494076 -172193778 + L1MA9 LINE L1 3747 6266 -46 1706 174 13 13 chr2 78494076 78494381 -172193473 - AluJo SINE Alu -7 305 1 8752 149 27 19 chr2 78494381 78494428 -172193426 + L1MA9 LINE L1 6266 6311 -1 2965 187 68 12 chr2 78494468 78495110 -172192744 - MER63C DNA MER1_type 0 930 253 245 162 0 0 chr2 78495109 78495146 -172192708 - MER63C DNA MER1_type -893 37 1 * 2577 171 14 33 chr2 78495223 78495737 -172192117 + L1MB2 LINE L1 5639 6142 -29 244 0 0 0 chr2 78496333 78496360 -172191494 + (TTTA)n Simple_repeat Simple_repeat 2 144 0 2259 95 0 0 chr2 78496360 78496643 -172191211 - AluSq SINE Alu -1 310 2 274 295 53 0 chr2 78497759 78497854 -172190000 + LTR16C LTR ERVL 31 130 -361 1184 246 27 14 chr2 78497880 78498177 -172189677 + LTR16C LTR ERVL 188 488 -3 372 271 25 17 chr2 78499073 78499191 -172188663 + MER103 DNA DNA 34 152 -14 254 306 146 8 chr2 78499385 78499653 -172188201 + L1M4 LINE L1 4300 4604 -1542 609 198 0 25 chr2 78500437 78500558 -172187296 - FLAM_C SINE Alu -24 119 2 2013 109 0 0 chr2 78500577 78500866 -172186988 + AluSq SINE Alu 20 308 0 882 244 96 65 chr2 78501021 78501407 -172186447 + MLT1J1 LTR MaLR 49 446 0 846 201 7 0 chr2 78501464 78501613 -172186241 - MER58A DNA MER1_type -49 175 26 365 348 0 0 chr2 78501700 78501812 -172186042 + L2 LINE L2 3200 3311 -2 21 36 0 0 chr2 78502062 78502090 -172185764 + AT_rich Low_complexity Low_complexity 1 28 0 635 299 49 33 chr2 78503007 78503251 -172184603 + MIR SINE MIR 3 250 -12 1941 266 39 8 chr2 78503348 78503987 -172183867 + L2 LINE L2 2152 2810 -504 2009 133 10 0 chr2 78504007 78504309 -172183545 - AluSq SINE Alu -8 305 1 1329 191 56 28 chr2 78504345 78504665 -172183189 + L1ME3A LINE L1 5840 6168 -2 502 293 37 11 chr2 78504778 78504969 -172182885 + MER117 DNA MER1_type 2 197 0 417 316 82 0 chr2 78505495 78505653 -172182201 + L2 LINE L2 2891 3061 -252 913 291 32 42 chr2 78505670 78506075 -172181779 - L2 LINE L2 0 3313 2913 312 286 84 39 chr2 78506070 78506248 -172181606 + L2 LINE L2 3078 3263 -50 * 329 252 201 0 chr2 78506558 78506697 -172181157 + MER45A DNA AcHobo 1 167 -11 268 289 0 10 chr2 78507157 78507261 -172180593 + (TA)n Simple_repeat Simple_repeat 2 104 0 239 136 12 62 chr2 78507283 78507364 -172180490 + (TA)n Simple_repeat Simple_repeat 2 78 0 246 237 37 59 chr2 78507724 78507859 -172179995 - L2 LINE L2 -18 3295 3164 480 290 100 23 chr2 78508014 78508273 -172179581 - L2 LINE L2 -434 2880 2602 1080 277 115 8 chr2 78508469 78508938 -172178916 + LTR33 LTR ERVL 3 521 0 330 330 0 0 chr2 78509046 78509134 -172178720 + L2 LINE L2 2579 2666 -648 739 234 0 0 chr2 78509183 78509370 -172178484 + FRAM SINE Alu 2 188 0 251 380 72 5 chr2 78509373 78509594 -172178260 + L2 LINE L2 2703 2938 -376 1347 147 56 32 chr2 78509864 78509964 -172177890 + MER33 DNA MER1_type 1 97 -2488 1926 186 92 0 chr2 78509964 78510324 -172177530 + MSTD LTR MaLR 4 396 0 1347 147 56 32 chr2 78510324 78510508 -172177346 + MER33 DNA MER1_type 97 292 -32 367 258 21 0 chr2 78510540 78510637 -172177217 + MER5A DNA MER1_type 7 105 -84 2112 142 0 3 chr2 78511371 78511674 -172176180 + AluSx SINE Alu 1 302 -10 27 0 0 0 chr2 78511901 78511928 -172175926 + AT_rich Low_complexity Low_complexity 1 27 0 2398 105 0 0 chr2 78512008 78512314 -172175540 - AluSg SINE Alu -4 306 1 242 303 33 16 chr2 78512953 78513075 -172174779 + MIR SINE MIR 138 261 -1 251 160 43 32 chr2 78513157 78513251 -172174603 + (TTAA)n Simple_repeat Simple_repeat 1 95 0 2027 132 3 17 chr2 78514357 78514667 -172173187 - AluSx SINE Alu 0 306 1 573 265 75 35 chr2 78514784 78514984 -172172870 - MER63A DNA MER1_type -1 209 2 293 281 81 84 chr2 78515282 78515663 -172172191 - L2 LINE L2 -4 3309 2930 1636 192 45 20 chr2 78515967 78516321 -172171533 - MLT1A1 LTR MaLR -2 363 1 334 271 84 9 chr2 78516573 78516680 -172171174 + MER5A DNA MER1_type 1 115 -74 732 312 203 37 chr2 78516688 78518055 -172169799 + L2 LINE L2 1310 2902 -412 22 0 0 0 chr2 78518776 78518798 -172169056 + AT_rich Low_complexity Low_complexity 1 22 0 223 283 133 35 chr2 78519589 78519702 -172168152 - MER5A DNA MER1_type -22 167 44 * 321 298 107 0 chr2 78519610 78519731 -172168123 + MER5A DNA MER1_type 55 188 -1 287 300 113 7 chr2 78520421 78520571 -172167283 + MIR SINE MIR 71 236 -26 1367 200 53 39 chr2 78521101 78521461 -172166393 - MLT1A1 LTR MaLR 0 365 1 247 297 11 22 chr2 78521586 78521677 -172166177 + GA-rich Low_complexity Low_complexity 1 90 0 642 271 129 72 chr2 78523049 78523466 -172164388 + LTR16B LTR ERVL 2 442 -22 265 292 56 11 chr2 78525860 78525949 -172161905 - MIR3 SINE MIR -1 207 115 234 318 135 8 chr2 78526398 78526524 -172161330 - MIR3 SINE MIR -30 178 37 302 227 92 76 chr2 78527280 78527399 -172160455 - L2 LINE L2 -10 3262 3142 434 299 90 84 chr2 78528147 78528468 -172159386 + MER102b DNA MER1_type 19 341 0 993 202 16 11 chr2 78528873 78529061 -172158793 + MER5A DNA MER1_type 1 189 0 1936 184 22 3 chr2 78529332 78529690 -172158164 + MLT1A1 LTR MaLR 1 365 0 372 226 177 11 chr2 78529807 78529988 -172157866 + L1MC4a LINE L1 5812 6022 -1786 213 39 0 0 chr2 78530002 78530028 -172157826 + (TG)n Simple_repeat Simple_repeat 1 26 0 1177 261 68 18 chr2 78530094 78530492 -172157362 - L1MD2 LINE L1 0 6359 5942 362 318 129 31 chr2 78531309 78531595 -172156259 + L3 LINE CR1 910 1223 -354 605 191 121 25 chr2 78531684 78531841 -172156013 + MLT1J2 LTR MaLR 229 428 -9 180 0 0 0 chr2 78531989 78532009 -172155845 + (TAA)n Simple_repeat Simple_repeat 1 20 0 501 221 82 19 chr2 78532131 78532289 -172155565 - MIR SINE MIR -48 214 47 880 173 38 16 chr2 78532987 78533172 -172154682 - MER5A DNA MER1_type 0 189 1 270 335 93 19 chr2 78533180 78533341 -172154513 - MER5B DNA MER1_type 0 178 6 1623 232 26 21 chr2 78533414 78533908 -172153946 + MER74A LTR ERVL 1 552 -6 2055 168 48 32 chr2 78534124 78534320 -172153534 + L1MB4 LINE L1 5602 5793 -387 2576 91 122 27 chr2 78534320 78534729 -172153125 + LTR7 LTR ERV1 1 448 -2 2055 168 48 32 chr2 78534729 78534973 -172152881 + L1MB4 LINE L1 5793 6049 -131 673 129 66 59 chr2 78534999 78535169 -172152685 + L1MB4 LINE L1 6020 6178 0 302 248 28 18 chr2 78536396 78536505 -172151349 - L3 LINE CR1 -48 1529 1420 360 284 181 0 chr2 78536508 78536635 -172151219 + MER5A DNA MER1_type 31 180 -9 749 247 17 11 chr2 78536641 78536815 -172151039 - MER5B DNA MER1_type -3 175 1 312 319 34 0 chr2 78537299 78537418 -172150436 - L2 LINE L2 -8 3264 3142 234 235 144 15 chr2 78537620 78537752 -172150102 - L2 LINE L2 -218 3054 2906 830 285 133 37 chr2 78539478 78540134 -172147720 - L1ME4a LINE L1 -5 6116 5380 2272 115 83 9 chr2 78540134 78540473 -172147381 - THE1B LTR MaLR 0 364 1 830 285 133 37 chr2 78540473 78540552 -172147302 - L1ME4a LINE L1 -741 5380 5310 353 373 69 11 chr2 78540585 78540947 -172146907 - L1ME4a LINE L1 -1020 5126 4744 188 225 106 113 chr2 78543471 78543613 -172144241 - MIR3 SINE MIR -55 153 13 542 310 96 15 chr2 78544693 78545198 -172142656 - L2 LINE L2 -50 3263 2709 1748 174 43 87 chr2 78545286 78545701 -172142153 - MLT2C1 LTR ERVL 0 397 1 322 278 0 0 chr2 78545803 78545893 -172141961 - MIR SINE MIR -2 260 171 254 206 103 0 chr2 78545959 78546027 -172141827 - MER91C DNA MER1_type -36 104 30 303 174 0 0 chr2 78546162 78546172 -172141682 + (TA)n Simple_repeat Simple_repeat 1 10 -59 2766 99 0 0 chr2 78546172 78546536 -172141318 + THE1B LTR MaLR 1 364 0 303 174 0 0 chr2 78546536 78546594 -172141260 + (TA)n Simple_repeat Simple_repeat 9 69 0 3086 149 176 86 chr2 78546606 78547161 -172140693 - L1MC3 LINE L1 0 7785 7281 310 257 29 29 chr2 78547161 78547266 -172140588 - MLT1F1 LTR MaLR -442 125 21 3086 149 176 86 chr2 78547266 78547456 -172140398 - L1MC3 LINE L1 -504 7281 7109 447 68 0 0 chr2 78547456 78547515 -172140339 + (TG)n Simple_repeat Simple_repeat 2 60 0 3086 149 176 86 chr2 78547515 78547655 -172140199 - L1MC3 LINE L1 -676 7109 6706 224 274 184 14 chr2 78547671 78547856 -172139998 - MIR SINE MIR -42 220 6 548 316 5 36 chr2 78547916 78548109 -172139745 - MIR SINE MIR -66 196 10 1338 236 30 12 chr2 78548110 78548445 -172139409 + MER58B DNA MER1_type 1 341 0 214 280 142 50 chr2 78549109 78549327 -172138527 - L2 LINE L2 -1366 1948 1711 270 95 0 0 chr2 78549749 78549791 -172138063 + (CCCTAA)n Simple_repeat Simple_repeat 2 43 0 267 103 0 0 chr2 78550186 78550225 -172137629 + (CTAAA)n Simple_repeat Simple_repeat 3 41 0 633 225 0 0 chr2 78552107 78552218 -172135636 - MER81 DNA DNA -3 111 1 214 205 0 0 chr2 78552380 78552419 -172135435 + L2 LINE L2 1961 1999 -1315 735 260 39 1 chr2 78552428 78552666 -172135188 + L1ME LINE L1 5408 5658 -504 348 264 108 71 chr2 78552852 78553277 -172134577 + L1M4 LINE L1 2112 2552 -3594 324 201 50 32 chr2 78553330 78553421 -172134433 + MIR3 SINE MIR 65 161 -47 244 308 82 20 chr2 78553905 78554051 -172133803 + MIR3 SINE MIR 24 178 -30 260 254 90 41 chr2 78554149 78554229 -172133625 - MIR SINE MIR -26 236 147 2283 88 3 0 chr2 78554229 78554514 -172133340 - AluSp SINE Alu -27 286 1 260 254 90 41 chr2 78554514 78554555 -172133299 - MIR SINE MIR -115 147 109 283 286 125 0 chr2 78554877 78554989 -172132865 - L2 LINE L2 -1 3271 3146 558 278 49 0 chr2 78555541 78555703 -172132151 + MIR SINE MIR 79 248 -14 22 0 0 0 chr2 78555706 78555728 -172132126 + AT_rich Low_complexity Low_complexity 1 22 0 649 264 14 32 chr2 78556255 78556471 -172131383 - L3 LINE CR1 -105 1472 1261 189 0 0 0 chr2 78556981 78557002 -172130852 + (T)n Simple_repeat Simple_repeat 1 21 0 226 194 16 32 chr2 78557547 78557609 -172130245 + (CA)n Simple_repeat Simple_repeat 2 62 0 201 338 113 33 chr2 78557875 78558026 -172129828 + MIR SINE MIR 58 220 -42 946 304 182 14 chr2 78558527 78559103 -172128751 + MER115 DNA AcHobo 21 693 0 26 0 0 0 chr2 78559143 78559169 -172128685 + AT_rich Low_complexity Low_complexity 1 26 0 19954 38 0 0 chr2 78559172 78562388 -172125466 - L1PA5 LINE L1 -7 6147 2936 1429 114 40 0 chr2 78562472 78562700 -172125154 + LTR26 LTR ERV1 362 598 -5 319 256 0 26 chr2 78563655 78563733 -172124121 + L2 LINE L2 3223 3298 -15 195 69 0 0 chr2 78563733 78563762 -172124092 + (ACTG)n Simple_repeat Simple_repeat 4 32 0 958 159 48 96 chr2 78564210 78564544 -172123310 + MER33 DNA MER1_type 7 324 0 233 281 92 40 chr2 78565344 78565601 -172122253 + L2 LINE L2 2754 3021 -251 241 200 320 0 chr2 78565743 78565818 -172122036 + L2 LINE L2 3215 3313 0 313 226 12 12 chr2 78566491 78566575 -172121279 + L2 LINE L2 2499 2582 -732 216 186 0 0 chr2 78567186 78567229 -172120625 + (CAT)n Simple_repeat Simple_repeat 3 45 0 181 338 54 14 chr2 78567239 78567313 -172120541 - L3 LINE CR1 -1076 501 425 * 310 200 74 97 chr2 78567311 78567486 -172120368 + L2 LINE L2 2995 3165 -148 1533 149 123 31 chr2 78567486 78567836 -172120018 + MER4B LTR ERV1 1 382 -228 225 0 0 0 chr2 78568446 78568471 -172119383 + (A)n Simple_repeat Simple_repeat 1 25 0 377 303 48 14 chr2 78568476 78568621 -172119233 + MIR3 SINE MIR 48 197 -11 349 264 39 65 chr2 78568717 78568872 -172118982 - MIR SINE MIR -77 185 35 346 283 29 80 chr2 78569120 78569258 -172118596 + MIR SINE MIR 62 192 -70 23 54 0 0 chr2 78570968 78571005 -172116849 + AT_rich Low_complexity Low_complexity 1 37 0 483 272 19 51 chr2 78571120 78571278 -172116576 - MIR3 SINE MIR -33 175 23 485 244 6 0 chr2 78571807 78571983 -172115871 + (TGG)n Simple_repeat Simple_repeat 3 179 0 198 0 0 0 chr2 78572083 78572105 -172115749 + (TA)n Simple_repeat Simple_repeat 2 23 0 242 286 201 18 chr2 78572976 78573249 -172114605 + MLT1J2 LTR MaLR 107 429 -21 189 326 73 82 chr2 78573649 78573882 -172113972 + MIR SINE MIR 32 262 0 391 309 119 11 chr2 78573961 78574230 -172113624 + L2 LINE L2 1346 1643 -1671 633 215 161 32 chr2 78575106 78575292 -172112562 + MER63A DNA MER1_type 1 210 0 302 284 110 79 chr2 78575305 78575622 -172112232 - L1ME4a LINE L1 -6 6115 5789 963 347 130 30 chr2 78575973 78577027 -172110827 + L2 LINE L2 219 1377 -1937 263 278 43 35 chr2 78577027 78577142 -172110712 + L2 LINE L2 2146 2261 -1053 391 299 18 7 chr2 78577383 78577587 -172110267 + MIR SINE MIR 2 262 0 219 268 18 0 chr2 78577928 78577984 -172109870 + L2 LINE L2 3257 3313 0 839 208 11 17 chr2 78578613 78578791 -172109063 - MIR SINE MIR -19 243 67 2076 142 13 10 chr2 78578910 78579219 -172108635 + AluSx SINE Alu 1 310 -2 474 241 17 29 chr2 78579489 78579647 -172108207 + MLT1H LTR MaLR 443 549 0 314 337 97 58 chr2 78579705 78580209 -172107645 + HAL1b LINE L1 249 772 -576 683 214 0 12 chr2 78580240 78580408 -172107446 - Charlie1b DNA MER1_type -5 518 353 1277 150 43 151 chr2 78580409 78580795 -172107059 + L1MC3 LINE L1 6705 7022 -763 285 109 0 0 chr2 78580795 78580841 -172107013 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 1277 150 43 151 chr2 78580841 78581034 -172106820 + L1MC3 LINE L1 7022 7234 -551 2580 214 50 21 chr2 78581059 78581991 -172105863 + L1M1 LINE L1 3315 4271 -3294 * 5042 150 32 3 chr2 78581983 78582922 -172104932 + L1MA9 LINE L1 5347 6312 0 2197 184 49 2 chr2 78582920 78583386 -172104468 + L1MC3 LINE L1 7256 7743 -42 * 1153 215 101 13 chr2 78583386 78583762 -172104092 - Charlie1b DNA MER1_type -114 409 1 385 189 9 18 chr2 78584720 78584831 -172103023 + GA-rich Low_complexity Low_complexity 3 112 0 345 253 117 0 chr2 78585431 78585585 -172102269 + L1M1 LINE L1 5072 5243 -2322 451 335 163 7 chr2 78585770 78586077 -172101777 + L1M1 LINE L1 5434 5788 -1777 320 256 58 39 chr2 78587335 78587491 -172100363 + HAL1b LINE L1 340 498 -850 411 285 86 71 chr2 78587620 78588153 -172099701 - L1ME4a LINE L1 -19 6102 5562 494 290 60 20 chr2 78588773 78589121 -172098733 + L1MC4a LINE L1 5711 6072 -1736 27 0 0 0 chr2 78589176 78589203 -172098651 + AT_rich Low_complexity Low_complexity 1 27 0 353 383 23 23 chr2 78589963 78590313 -172097541 - L1M4 LINE L1 -2214 3932 3583 258 105 0 0 chr2 78590762 78590800 -172097054 + (T)n Simple_repeat Simple_repeat 1 38 0 324 0 0 0 chr2 78592328 78592364 -172095490 + (TG)n Simple_repeat Simple_repeat 2 37 0 1441 237 121 27 chr2 78592415 78592868 -172094986 + L1MC4a LINE L1 5324 5842 -1966 2636 36 0 3 chr2 78592868 78593177 -172094677 + AluY SINE Alu 1 308 -3 1441 237 121 27 chr2 78593177 78593285 -172094569 + L1MC4a LINE L1 5842 5938 -1870 1683 168 24 14 chr2 78593348 78593645 -172094209 - AluJb SINE Alu -12 300 1 770 309 40 30 chr2 78593665 78593870 -172093984 - L1ME LINE L1 -399 5771 5570 2333 88 0 3 chr2 78593870 78594166 -172093688 + AluSq SINE Alu 1 295 -18 770 309 40 30 chr2 78594166 78594377 -172093477 - L1ME LINE L1 -600 5570 5347 306 0 0 0 chr2 78594377 78594411 -172093443 + (TG)n Simple_repeat Simple_repeat 1 34 0 770 309 40 30 chr2 78594411 78594462 -172093392 - L1ME LINE L1 -823 5347 5298 2310 148 0 0 chr2 78594838 78595204 -172092650 - MER47A DNA MER2_type 0 366 1 231 342 54 36 chr2 78595211 78595322 -172092532 - MIR SINE MIR -142 120 8 354 292 105 41 chr2 78596502 78596673 -172091181 - MIR SINE MIR -61 201 20 516 288 102 9 chr2 78597082 78597308 -172090546 - LTR16C LTR ERVL -44 447 201 560 60 0 120 chr2 78597322 78597422 -172090432 - MER41A LTR ERV1 -81 473 386 285 291 52 45 chr2 78597394 78597528 -172090326 - LTR16C LTR ERVL -277 214 80 * 218 203 0 17 chr2 78600924 78600983 -172086871 + CT-rich Low_complexity Low_complexity 4 61 0 1039 265 5 0 chr2 78601810 78602033 -172085821 - MER58A DNA MER1_type 0 224 1 2132 128 3 6 chr2 78602415 78602728 -172085126 - AluSx SINE Alu 0 312 1 221 214 0 0 chr2 78602846 78602888 -172084966 + L2 LINE L2 3226 3267 -5 3992 98 19 29 chr2 78603165 78603746 -172084108 - L1PA14 LINE L1 -1 6160 5586 2167 123 11 0 chr2 78603746 78604295 -172083559 + L1PA14 LINE L1 5002 5555 -606 30 27 0 0 chr2 78604604 78604641 -172083213 + AT_rich Low_complexity Low_complexity 1 37 0 228 250 17 17 chr2 78605245 78605305 -172082549 + L2 LINE L2 3125 3184 -88 256 221 29 15 chr2 78606654 78606722 -172081132 - L1MA5 LINE L1 -132 6168 6100 1103 99 0 19 chr2 78606724 78606885 -172080969 + L1MA5 LINE L1 6142 6299 -1 1043 136 17 11 chr2 78607285 78607462 -172080392 - MER96B DNA MER1_type? -239 178 1 2412 77 7 0 chr2 78608331 78608631 -172079223 - AluY SINE Alu -9 302 1 776 256 68 55 chr2 78609125 78609524 -172078330 - MER114 LTR ERV 0 648 245 1255 281 81 63 chr2 78609551 78610331 -172077523 - L1MEd LINE L1 -5061 1058 265 622 255 92 27 chr2 78610683 78610867 -172076987 - MIR SINE MIR -34 228 33 4114 80 14 55 chr2 78610970 78611548 -172076306 + MER41A LTR ERV1 1 554 0 312 319 28 44 chr2 78611751 78611933 -172075921 - L2 LINE L2 -191 3081 2903 261 356 96 0 chr2 78612495 78612630 -172075224 + MIR SINE MIR 105 252 -10 269 288 76 38 chr2 78613632 78613764 -172074090 + MIR3 SINE MIR 37 173 -35 2332 93 0 13 chr2 78614687 78615000 -172072854 + AluY SINE Alu 1 309 -2 255 103 0 0 chr2 78615994 78616033 -172071821 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 301 336 28 0 chr2 78616035 78616142 -172071712 - L2 LINE L2 -22 3250 3141 30 0 0 0 chr2 78616240 78616270 -172071584 + AT_rich Low_complexity Low_complexity 1 30 0 412 267 49 37 chr2 78616451 78616665 -172071189 - MIR SINE MIR -71 191 20 183 296 51 51 chr2 78617939 78618037 -172069817 + L2 LINE L2 3171 3268 -45 194 250 88 50 chr2 78618873 78618953 -172068901 - L2 LINE L2 -4 3309 3227 182 285 26 99 chr2 78619295 78619446 -172068408 - MIR SINE MIR -61 147 8 215 275 265 25 chr2 78619782 78619982 -172067872 - L2 LINE L2 0 3272 3025 209 363 52 15 chr2 78620009 78620144 -172067710 + MER5B DNA MER1_type 9 148 -30 195 272 139 25 chr2 78620353 78620511 -172067343 - L2 LINE L2 -373 2941 2766 516 281 53 99 chr2 78620727 78620927 -172066927 - MIR SINE MIR -10 252 65 382 16 323 32 chr2 78620927 78620989 -172066865 - MADE1 DNA Mariner 0 80 1 516 281 53 99 chr2 78620989 78621051 -172066803 - MIR SINE MIR -197 65 2 251 310 93 37 chr2 78622602 78623012 -172064842 + L1 LINE L1 4114 4546 -1600 546 309 60 85 chr2 78623036 78623367 -172064487 - L2 LINE L2 -958 2356 2041 2092 137 0 0 chr2 78623367 78623666 -172064188 - AluSx SINE Alu -13 299 1 546 309 60 85 chr2 78623666 78623851 -172064003 - L2 LINE L2 -1273 2041 1853 212 250 58 0 chr2 78623934 78623986 -172063868 + MIR SINE MIR 98 152 -56 12055 96 2 13 chr2 78624661 78624990 -172062864 - L1PA8 LINE L1 -8 6164 5833 2065 120 0 10 chr2 78624990 78625289 -172062565 - AluY SINE Alu -15 296 1 12055 96 2 13 chr2 78625289 78627380 -172060474 - L1PA8 LINE L1 -339 5833 3758 218 370 97 32 chr2 78627383 78627537 -172060317 - L2 LINE L2 -13 3259 3096 2608 104 8 14 chr2 78627557 78627914 -172059940 + THE1A LTR MaLR 1 355 0 12732 90 5 1 chr2 78627915 78629488 -172058366 + THE1A-int LTR MaLR 2 1580 0 2816 88 6 0 chr2 78629488 78629841 -172058013 + THE1A LTR MaLR 1 355 0 212 208 94 0 chr2 78629903 78629956 -172057898 + L2 LINE L2 3254 3311 -2 2091 115 7 16 chr2 78630134 78630439 -172057415 - AluSg SINE Alu -3 307 6 360 45 0 0 chr2 78630735 78630779 -172057075 + THE1-int LTR MaLR 406 449 -1131 440 116 8 41 chr2 78631650 78631771 -172056083 + (CA)n Simple_repeat Simple_repeat 1 117 0 283 255 32 11 chr2 78632605 78632699 -172055155 + CT-rich Low_complexity Low_complexity 2 97 0 1378 187 41 8 chr2 78633118 78633385 -172054469 + MER58 DNA MER1_type 4 279 -2141 902 240 74 49 chr2 78633404 78633577 -172054277 + MLT1C LTR MaLR 135 321 -146 2008 115 41 0 chr2 78633577 78633872 -172053982 + AluY SINE Alu 1 307 -4 902 240 74 49 chr2 78633872 78634023 -172053831 + MLT1C LTR MaLR 321 467 0 474 281 52 13 chr2 78636071 78636224 -172051630 + MIR SINE MIR 32 190 -72 250 200 0 17 chr2 78636213 78636273 -172051581 - MIR SINE MIR -44 218 160 * 228 306 20 20 chr2 78636485 78636583 -172051271 + HAL1b LINE L1 626 723 -625 21 82 0 0 chr2 78636583 78636632 -172051222 + AT_rich Low_complexity Low_complexity 1 49 0 524 251 125 47 chr2 78638104 78638383 -172049471 + HAL1b LINE L1 309 609 -739 302 257 133 55 chr2 78638838 78639056 -172048798 + L1ME4a LINE L1 2115 2349 -4047 186 43 0 0 chr2 78639287 78639310 -172048544 + (A)n Simple_repeat Simple_repeat 1 23 0 556 281 158 4 chr2 78640146 78640438 -172047416 + MLT1J2 LTR MaLR 2 331 -119 2421 90 0 0 chr2 78641289 78641590 -172046264 + AluY SINE Alu 1 301 -10 23 68 0 0 chr2 78641601 78641645 -172046209 + AT_rich Low_complexity Low_complexity 1 44 0 2277 71 3 0 chr2 78642544 78642851 -172045003 - AluY SINE Alu 0 308 1 243 279 54 27 chr2 78643377 78643524 -172044330 + L1ME4a LINE L1 3889 4039 -2176 309 301 64 74 chr2 78644471 78644876 -172042978 + L1ME4a LINE L1 4651 5051 -1164 392 270 112 75 chr2 78645096 78645463 -172042391 + L1ME4a LINE L1 5472 5859 -331 2147 198 42 42 chr2 78645463 78645968 -172041886 + MLT1D LTR MaLR 1 505 0 392 270 112 75 chr2 78645968 78646037 -172041817 + L1ME4a LINE L1 5859 5924 -266 241 257 171 0 chr2 78646097 78646202 -172041652 + L1ME4a LINE L1 6067 6189 -1 332 328 30 52 chr2 78646466 78646869 -172040985 - HAL1b LINE L1 -636 712 319 2785 116 3 0 chr2 78647342 78647705 -172040149 + THE1B LTR MaLR 1 364 0 10627 83 43 29 chr2 78647705 78649258 -172038596 + THE1B-int LTR MaLR 1 1580 0 273 171 0 0 chr2 78649259 78649300 -172038554 + MSTA LTR MaLR 388 428 0 1487 163 40 126 chr2 78649983 78650357 -172037497 - MLT1B LTR MaLR -48 342 1 635 123 0 85 chr2 78651515 78651621 -172036233 - Tigger7 DNA MER2_type -1 2586 2490 * 1625 170 11 4 chr2 78651620 78651885 -172035969 - Tigger7 DNA MER2_type -466 267 1 1026 209 51 13 chr2 78652396 78652631 -172035223 + MER20B DNA MER1_type 44 287 -496 1746 240 54 20 chr2 78652648 78653090 -172034764 - MLT1D LTR MaLR -48 457 1 225 132 0 0 chr2 78653256 78653294 -172034560 + (A)n Simple_repeat Simple_repeat 1 38 0 797 230 37 33 chr2 78653297 78653567 -172034287 + MER20B DNA MER1_type 461 731 -52 5215 286 122 24 chr2 78654020 78655423 -172032431 + L2 LINE L2 84 1349 -1965 2487 72 0 3 chr2 78655423 78655727 -172032127 - AluSq SINE Alu -9 304 2 5215 286 122 24 chr2 78655727 78656792 -172031062 + L2 LINE L2 1349 2793 -521 624 246 130 55 chr2 78656825 78657186 -172030668 + MLT1J2 LTR MaLR 61 448 -2 672 291 202 18 chr2 78657199 78657581 -172030273 + L2 LINE L2 2833 3284 -29 794 259 114 89 chr2 78657586 78658114 -172029740 + MLT1H LTR MaLR 9 549 0 369 296 33 101 chr2 78659130 78659556 -172028298 - MLT1J LTR MaLR -3 508 112 1755 153 0 111 chr2 78659730 78660116 -172027738 + MER7A DNA MER2_type 1 341 -5 308 264 136 55 chr2 78660217 78660327 -172027527 + L2 LINE L2 3139 3257 -15 486 328 139 33 chr2 78661253 78661975 -172025879 + L1ME LINE L1 3648 4440 -1706 21 0 0 0 chr2 78662678 78662699 -172025155 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 78662767 78662795 -172025059 + AT_rich Low_complexity Low_complexity 1 28 0 280 333 61 5 chr2 78662977 78663190 -172024664 + L1ME LINE L1 5548 5772 -349 2381 97 0 3 chr2 78663335 78663644 -172024210 + AluSc SINE Alu 1 308 -1 24 53 0 0 chr2 78663785 78663823 -172024031 + AT_rich Low_complexity Low_complexity 1 38 0 499 233 100 20 chr2 78667907 78668057 -172019797 - MIR SINE MIR -93 169 8 421 233 78 0 chr2 78669078 78669181 -172018673 - L2 LINE L2 -13 3300 3190 384 273 223 23 chr2 78669402 78669662 -172018192 + L3 LINE CR1 1079 1390 -187 394 281 14 22 chr2 78670228 78670367 -172017487 + CT-rich Low_complexity Low_complexity 3 140 0 183 267 0 0 chr2 78670526 78670571 -172017283 + L2 LINE L2 3269 3313 0 187 373 28 62 chr2 78670850 78671027 -172016827 + L2 LINE L2 2925 3095 -177 201 176 93 9 chr2 78672564 78672672 -172015182 + CT-rich Low_complexity Low_complexity 5 121 0 762 284 18 41 chr2 78672854 78673195 -172014659 + L1ME4a LINE L1 5599 5931 -190 229 276 67 76 chr2 78673597 78673702 -172014152 + MIR SINE MIR 16 119 -89 189 0 0 0 chr2 78675214 78675235 -172012619 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 201 39 0 0 chr2 78675258 78675284 -172012570 + (CAA)n Simple_repeat Simple_repeat 2 27 0 267 246 16 0 chr2 78678468 78678529 -172009325 + G-rich Low_complexity Low_complexity 6 67 0 187 274 59 0 chr2 78679056 78679107 -172008747 + L2 LINE L2 2707 2760 -554 353 286 97 11 chr2 78679958 78680143 -172007711 - L1ME LINE L1 -299 5822 5622 6238 99 35 6 chr2 78680384 78681669 -172006185 - L1PA15 LINE L1 -13 6803 5550 10635 189 28 60 chr2 78681671 78684020 -172003834 - L1PA15 LINE L1 -1335 5462 3206 195 42 0 0 chr2 78684020 78684044 -172003810 + (TA)n Simple_repeat Simple_repeat 2 25 0 10635 189 28 60 chr2 78684044 78684355 -172003499 - L1PA15 LINE L1 -3591 3206 2887 3915 159 37 14 chr2 78684360 78684744 -172003110 - L1PB1 LINE L1 -243 6624 6250 2141 112 3 0 chr2 78684744 78685031 -172002823 - AluSx SINE Alu -24 288 1 3915 159 37 14 chr2 78685031 78686024 -172001830 - L1PB1 LINE L1 -617 6250 5216 382 118 0 0 chr2 78686015 78686066 -172001788 + L1P LINE L1 4106 4156 -1990 * 4095 165 50 8 chr2 78686061 78686817 -172001037 - L1PB1 LINE L1 -6075 788 1 5411 211 25 5 chr2 78686817 78687959 -171999895 - L1PA15 LINE L1 -4443 2354 1179 313 304 91 88 chr2 78687982 78688301 -171999553 - L1MC/D LINE L1 -2232 5576 5257 259 288 62 42 chr2 78688462 78688731 -171999123 - L1M4 LINE L1 -1092 5054 4769 373 276 48 0 chr2 78688747 78688852 -171999002 + MLT1J2 LTR MaLR 67 176 -274 366 107 0 0 chr2 78688869 78688925 -171998929 + (GA)n Simple_repeat Simple_repeat 1 56 0 527 233 64 29 chr2 78688984 78689156 -171998698 + MLT1I LTR MaLR 232 409 0 339 73 0 0 chr2 78689280 78689321 -171998533 - L1PA13 LINE L1 -5233 1554 1514 372 314 28 16 chr2 78689332 78689587 -171998267 - L1M4 LINE L1 -1536 4610 4353 228 111 0 0 chr2 78689603 78689639 -171998215 + (TG)n Simple_repeat Simple_repeat 1 36 0 991 101 23 0 chr2 78689811 78689940 -171997914 + AluSq/x SINE Alu 1 132 -181 241 25 0 0 chr2 78689940 78689980 -171997874 + Alu SINE Alu 264 303 0 380 298 40 59 chr2 78690040 78690496 -171997358 - L1M4 LINE L1 -2096 4050 3604 257 286 131 0 chr2 78690517 78690601 -171997253 + MER5A DNA MER1_type 18 112 -77 306 352 18 9 chr2 78690652 78690820 -171997034 - MER5B DNA MER1_type 0 189 7 3735 45 7 7 chr2 78690974 78691422 -171996432 - LTR7 LTR ERV1 -2 448 1 2555 77 48 13 chr2 78691422 78691801 -171996053 - HERVH LTR ERV1 0 7713 7322 1428 130 19 0 chr2 78691799 78692015 -171995839 - HERVH LTR ERV1 -1894 5819 5600 * 4382 137 3 5 chr2 78692016 78692679 -171995175 - HERVH LTR ERV1 -2564 5149 4488 3417 113 0 6 chr2 78692708 78693211 -171994643 - HERVH LTR ERV1 -3722 3991 3492 989 120 7 0 chr2 78693201 78693351 -171994503 - HERVH LTR ERV1 -4423 3290 3140 * 20157 91 23 21 chr2 78693330 78696310 -171991544 - HERVH LTR ERV1 -4718 2995 12 3767 49 0 7 chr2 78696330 78696781 -171991073 - LTR7 LTR ERV1 -2 448 1 549 255 60 22 chr2 78696835 78697019 -171990835 - MER112 DNA MER1_type -64 196 6 2840 157 6 32 chr2 78697349 78697712 -171990142 - L1MA7 LINE L1 -25 6266 5918 2249 120 21 51 chr2 78697712 78698087 -171989767 + THE1B LTR MaLR 1 364 0 2840 157 6 32 chr2 78698087 78698227 -171989627 - L1MA7 LINE L1 -373 5918 5776 227 192 0 0 chr2 78698266 78698318 -171989536 + (TA)n Simple_repeat Simple_repeat 1 52 0 483 91 52 0 chr2 78698323 78698400 -171989454 - L1MA7 LINE L1 -500 5791 5711 * 1294 154 23 5 chr2 78698392 78698613 -171989241 + L1MA7 LINE L1 5509 5733 -579 432 67 0 0 chr2 78698992 78699052 -171988802 - L1MA3 LINE L1 -2 6303 6244 238 333 64 81 chr2 78699305 78699539 -171988315 + L2 LINE L2 3039 3268 -4 21 0 0 0 chr2 78700495 78700516 -171987338 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 78700826 78700854 -171987000 + AT_rich Low_complexity Low_complexity 1 28 0 615 297 65 13 chr2 78701202 78701508 -171986346 + L1ME4a LINE L1 5533 5854 -267 21 36 0 0 chr2 78701699 78701727 -171986127 + AT_rich Low_complexity Low_complexity 1 28 0 528 162 21 162 chr2 78702594 78702736 -171985118 + MER5A DNA MER1_type 65 186 -3 905 204 0 0 chr2 78702741 78702898 -171984956 + FRAM SINE Alu 4 160 -16 300 246 44 79 chr2 78702914 78703166 -171984688 - L1MC4 LINE L1 -215 7827 7585 739 168 0 0 chr2 78703260 78703373 -171984481 - FLAM_C SINE Alu -19 124 12 273 253 0 12 chr2 78703389 78703472 -171984382 + L1MC4 LINE L1 7483 7564 -478 313 306 231 42 chr2 78703853 78704069 -171983785 - L2 LINE L2 0 3272 3016 388 158 19 14 chr2 78704070 78704162 -171983692 - MLT1I LTR MaLR -18 424 320 257 258 28 0 chr2 78704154 78704248 -171983606 - MLT1J LTR MaLR -271 178 43 * 1116 186 14 23 chr2 78704674 78704895 -171982959 + MER20 DNA MER1_type 1 219 0 2023 94 59 192 chr2 78705241 78705763 -171982091 - MLT2A2 LTR ERVL 0 453 1 342 0 0 0 chr2 78706393 78706431 -171981423 + (CAA)n Simple_repeat Simple_repeat 2 39 0 442 267 37 43 chr2 78706599 78706760 -171981094 - MLT1I LTR MaLR -251 158 19 479 330 90 56 chr2 78706785 78707323 -171980531 - L2 LINE L2 -257 3015 2468 239 137 118 20 chr2 78707644 78707695 -171980159 + L1ME3A LINE L1 5552 5607 -559 548 222 16 0 chr2 78707695 78707821 -171980033 + MLT2D LTR ERVL 1 128 -286 663 265 0 54 chr2 78707830 78708015 -171979839 + MLT2D LTR ERVL 240 414 0 945 263 39 12 chr2 78708026 78708364 -171979490 + L1ME3A LINE L1 5617 5963 -207 441 36 0 0 chr2 78708700 78708755 -171979099 + (TG)n Simple_repeat Simple_repeat 2 56 0 2102 171 11 3 chr2 78709277 78709639 -171978215 - MLT1A1 LTR MaLR 0 365 1 219 205 0 0 chr2 78711795 78711834 -171976020 - MIR3 SINE MIR -13 195 157 617 304 177 8 chr2 78711863 78712123 -171975731 - L2 LINE L2 -1 3271 2968 184 333 0 17 chr2 78712151 78712211 -171975643 - MIR SINE MIR -131 77 19 352 350 58 82 chr2 78712231 78712924 -171974930 - L2 LINE L2 -70 3202 2522 599 223 9 0 chr2 78712924 78713036 -171974818 - MER81 DNA DNA 0 114 2 352 350 58 82 chr2 78713036 78713145 -171974709 - L2 LINE L2 -750 2522 2412 21 36 0 0 chr2 78713145 78713173 -171974681 + AT_rich Low_complexity Low_complexity 1 28 0 5134 148 40 40 chr2 78713177 78714028 -171973826 - L1PA16 LINE L1 -3 6163 5295 2839 3 0 3 chr2 78714028 78714339 -171973515 - AluYa5 SINE Alu -1 310 1 5134 148 40 40 chr2 78714339 78714406 -171973448 - L1PA16 LINE L1 -870 5296 5230 328 351 0 0 chr2 78714931 78715042 -171972812 - L1M2 LINE L1 -6407 442 332 331 347 4 24 chr2 78715550 78715798 -171972056 - L1MC4 LINE L1 0 8042 7800 303 28 0 0 chr2 78716159 78716195 -171971659 + (CA)n Simple_repeat Simple_repeat 1 36 0 4316 203 64 4 chr2 78716198 78717186 -171970668 + Tigger6a DNA MER2_type 8 1054 -29 348 291 97 62 chr2 78717188 78717477 -171970377 - L1M4 LINE L1 -1333 4813 4515 2102 129 0 0 chr2 78717481 78717776 -171970078 + AluSx SINE Alu 2 296 -16 1160 320 37 25 chr2 78718021 78718593 -171969261 + L1PA13 LINE L1 788 1366 -6208 246 361 8 0 chr2 78718666 78718796 -171969058 + L1PA13 LINE L1 2168 2298 -5276 3734 220 39 57 chr2 78719087 78720321 -171967533 + L1PA13 LINE L1 2177 3418 -4166 2054 100 10 36 chr2 78720321 78720622 -171967232 + AluY SINE Alu 1 293 -18 3734 220 39 57 chr2 78720622 78720887 -171966967 + L1PA13 LINE L1 3418 3686 -3898 1152 272 60 85 chr2 78721043 78722607 -171965247 - L1ME LINE L1 -4174 2087 520 779 221 98 0 chr2 78722794 78722998 -171964856 + MER58A DNA MER1_type 1 224 0 362 21 21 0 chr2 78723610 78723657 -171964197 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 404 269 80 60 chr2 78723658 78723859 -171963995 - L2 LINE L2 -25 3288 3084 228 186 43 14 chr2 78725029 78725099 -171962755 + (TA)n Simple_repeat Simple_repeat 2 73 0 13596 122 16 57 chr2 78725412 78725731 -171962123 - Tigger1 DNA MER2_type -4 2414 2083 2137 133 7 0 chr2 78725731 78726031 -171961823 - AluSx SINE Alu -10 302 1 13596 122 16 57 chr2 78726031 78728110 -171959744 - Tigger1 DNA MER2_type -335 2083 121 1712 122 4 0 chr2 78728110 78728356 -171959498 + AluSg/x SINE Alu 66 312 0 13596 122 16 57 chr2 78728356 78728463 -171959391 - Tigger1 DNA MER2_type -2297 121 11 3253 195 39 4 chr2 78728759 78729476 -171958378 - L1MB2 LINE L1 -3 6168 5427 273 279 62 80 chr2 78729476 78729702 -171958152 + HAL1 LINE L1 445 666 -1841 615 274 118 32 chr2 78729805 78730144 -171957710 + HAL1 LINE L1 1544 1911 -596 195 346 47 9 chr2 78730497 78730604 -171957250 + MIR SINE MIR 35 145 -63 1215 181 0 13 chr2 78731103 78731335 -171956519 - MLT2B1 LTR ERVL -291 229 1 561 271 54 6 chr2 78731667 78731833 -171956021 + MIR SINE MIR 30 203 -59 185 250 0 0 chr2 78731923 78731963 -171955891 + L2 LINE L2 3269 3308 -5 347 309 5 41 chr2 78731978 78732172 -171955682 + LTR33 LTR ERVL 326 512 -9 245 241 45 18 chr2 78732361 78732473 -171955381 + L1ME LINE L1 5711 5825 -296 1263 208 7 115 chr2 78732671 78733080 -171954774 + MLT1A1 LTR MaLR 1 365 0 219 184 184 20 chr2 78733243 78733292 -171954562 + L2 LINE L2 3196 3252 -61 572 280 0 7 chr2 78733315 78733465 -171954389 + L2 LINE L2 3163 3311 -2 2319 107 0 0 chr2 78733507 78733805 -171954049 - AluSq SINE Alu -15 298 1 3910 181 73 25 chr2 78733813 78735617 -171952237 - L1MB7 LINE L1 0 6995 5110 258 45 23 45 chr2 78735617 78735661 -171952193 + LTR9B LTR ERV1 288 330 -314 3093 221 55 39 chr2 78735831 78738146 -171949708 - L1MB7 LINE L1 -4543 2416 18 472 222 0 0 chr2 78738815 78738905 -171948949 - MER81 DNA DNA -24 90 1 688 300 21 17 chr2 78738921 78739154 -171948700 - MIR SINE MIR -15 247 14 3227 264 123 24 chr2 78739313 78740676 -171947178 - L2 LINE L2 -14 3299 1799 288 211 0 0 chr2 78740691 78740743 -171947111 + MER58A DNA MER1_type 18 69 -38 6162 137 33 32 chr2 78740772 78742447 -171945407 - L1MA3 LINE L1 -14 7710 6027 * 15696 147 29 17 chr2 78742424 78745141 -171942713 - L1MA3 LINE L1 -4714 2851 97 1715 181 7 23 chr2 78745141 78745444 -171942410 - AluJb SINE Alu -14 298 1 15696 147 29 17 chr2 78745444 78745523 -171942331 - L1MA3 LINE L1 -7468 97 20 678 217 40 7 chr2 78745525 78745677 -171942177 + MER58A DNA MER1_type 53 209 -15 24 32 0 0 chr2 78745708 78745739 -171942115 + AT_rich Low_complexity Low_complexity 1 31 0 3814 141 32 25 chr2 78746053 78746772 -171941082 - L1MA4 LINE L1 0 6504 5781 2186 136 65 36 chr2 78746772 78747283 -171940571 - MLT2A2 LTR ERVL -6 548 1 12247 180 25 11 chr2 78747284 78748603 -171939251 - L1MA4 LINE L1 -714 5790 4491 1636 183 0 62 chr2 78748603 78748926 -171938928 - AluSx SINE Alu -9 303 1 12247 180 25 11 chr2 78748926 78750622 -171937232 - L1MA4 LINE L1 -2013 4491 2732 994 231 133 25 chr2 78750617 78751327 -171936527 - L1MA4 LINE L1 -4496 1855 1095 * 554 335 63 24 chr2 78751705 78752162 -171935692 - L1MA4 LINE L1 -5804 477 3 1427 274 68 64 chr2 78752471 78753375 -171934479 + L2 LINE L2 2348 3308 -5 630 247 50 22 chr2 78753383 78753565 -171934289 - MIR SINE MIR -28 234 48 240 186 0 0 chr2 78753774 78753833 -171934021 + GA-rich Low_complexity Low_complexity 2 60 0 320 259 25 0 chr2 78755013 78755094 -171932760 - MIR SINE MIR -11 251 169 694 266 122 82 chr2 78755179 78755547 -171932307 - MLT1H LTR MaLR -146 403 21 448 281 31 38 chr2 78755565 78755725 -171932129 - MIR SINE MIR -102 160 2 202 342 79 31 chr2 78755735 78755963 -171931891 + L2 LINE L2 1837 2075 -1239 306 250 0 0 chr2 78756296 78756368 -171931486 + MER116 DNA Mariner 9 80 0 411 262 93 31 chr2 78756716 78757006 -171930848 - L1ME4a LINE L1 -3 6118 5811 511 308 45 99 chr2 78757025 78757450 -171930404 - L1ME4a LINE L1 -426 5695 5294 505 267 147 37 chr2 78757497 78757823 -171930031 - HAL1 LINE L1 0 2507 2146 591 162 170 105 chr2 78757823 78758070 -171929784 + L1MD3 LINE L1 7730 7992 -3 289 282 53 15 chr2 78758076 78758207 -171929647 - HAL1 LINE L1 -353 2154 2019 885 245 45 61 chr2 78758403 78758756 -171929098 - HAL1 LINE L1 -704 1803 1457 2247 102 3 0 chr2 78758756 78759050 -171928804 - AluSp SINE Alu -18 295 1 885 245 45 61 chr2 78759050 78759120 -171928734 - HAL1 LINE L1 -1050 1457 1387 423 0 0 0 chr2 78759127 78759174 -171928680 + (TTCA)n Simple_repeat Simple_repeat 2 48 0 412 193 143 43 chr2 78759217 78759378 -171928476 - HAL1 LINE L1 -1230 1277 1101 290 229 37 73 chr2 78759416 78759525 -171928329 - HAL1 LINE L1 -1610 897 793 1674 208 134 64 chr2 78759858 78760579 -171927275 + L1MC5 LINE L1 6614 7385 -576 310 243 14 0 chr2 78760603 78760673 -171927181 - MER81 DNA DNA -43 71 1 2125 159 8 8 chr2 78760924 78761319 -171926535 - L1MB3 LINE L1 -7 6176 5782 214 217 43 14 chr2 78761319 78761388 -171926466 + (TA)n Simple_repeat Simple_repeat 2 72 0 232 260 227 7 chr2 78762535 78762689 -171925165 - MIR SINE MIR -66 196 9 233 342 120 17 chr2 78763586 78763703 -171924151 - L2 LINE L2 -7 3265 3137 1172 167 14 19 chr2 78763803 78764018 -171923836 + MER20 DNA MER1_type 5 218 -1 203 0 37 0 chr2 78764114 78764141 -171923713 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 2254 93 13 3 chr2 78764374 78764675 -171923179 + AluSg SINE Alu 5 308 -2 4228 78 4 0 chr2 78766348 78766900 -171920954 + MER41A LTR ERV1 1 554 0 615 310 148 3 chr2 78766944 78767276 -171920578 - MLT1I LTR MaLR -26 383 4 226 233 17 17 chr2 78767281 78767341 -171920513 - L2 LINE L2 -327 2945 2886 1202 225 86 80 chr2 78768040 78768538 -171919316 - MLT1D LTR MaLR 0 505 5 513 224 36 103 chr2 78768546 78768827 -171919027 + L1ME LINE L1 898 1159 -5475 1549 186 105 107 chr2 78768857 78769465 -171918389 + MER76 LTR ERV 49 655 -33 921 275 62 26 chr2 78769478 78770252 -171917602 + L1ME LINE L1 1030 1832 -4814 1142 261 76 30 chr2 78770728 78771122 -171916732 - L2 LINE L2 -2 3311 2900 2388 249 74 4 chr2 78771613 78772327 -171915527 + Zaphod DNA AcHobo 1 764 -3267 24 85 0 0 chr2 78772386 78772445 -171915409 + AT_rich Low_complexity Low_complexity 1 59 0 1213 204 78 6 chr2 78772514 78772858 -171914996 + Zaphod DNA AcHobo 3654 4022 -9 366 291 53 55 chr2 78773046 78773237 -171914617 + MIR3 SINE MIR 8 219 -43 1955 191 79 55 chr2 78773967 78774369 -171913485 - MLT1D LTR MaLR 0 505 87 2289 104 13 0 chr2 78774369 78774677 -171913177 - AluSx SINE Alu 0 312 1 1955 191 79 55 chr2 78774677 78774767 -171913087 - MLT1D LTR MaLR -418 87 1 1586 225 67 8 chr2 78774924 78775298 -171912556 + MSTD LTR MaLR 1 396 0 1494 203 68 11 chr2 78775567 78775936 -171911918 - MLT1B LTR MaLR 0 390 1 721 335 136 20 chr2 78776110 78776566 -171911288 - L2 LINE L2 -343 2971 2463 685 317 151 37 chr2 78776850 78777368 -171910486 + L3 LINE CR1 440 1016 -561 203 229 21 0 chr2 78777368 78777416 -171910438 + (TA)n Simple_repeat Simple_repeat 1 49 0 279 301 24 0 chr2 78777535 78777618 -171910236 - L2 LINE L2 -1 3312 3228 206 343 105 41 chr2 78777663 78777835 -171910019 + L3 LINE CR1 1268 1450 -127 714 291 84 9 chr2 78778065 78778505 -171909349 - L1ME4a LINE L1 -200 5921 5449 30 83 0 0 chr2 78778769 78778841 -171909013 + AT_rich Low_complexity Low_complexity 1 72 0 358 318 161 47 chr2 78779087 78779342 -171908512 + L1ME LINE L1 5529 5812 -309 1781 236 75 43 chr2 78779358 78780121 -171907733 + HAL1 LINE L1 1063 1849 -658 351 271 0 10 chr2 78780437 78780533 -171907321 - MIR SINE MIR -44 218 124 428 297 0 0 chr2 78780602 78780740 -171907114 + HAL1 LINE L1 2074 2211 -296 258 322 0 17 chr2 78780821 78780939 -171906915 + (TATG)n Simple_repeat Simple_repeat 4 119 0 365 208 50 117 chr2 78782223 78782343 -171905511 + MER81 DNA DNA 1 112 -2 447 298 86 0 chr2 78782676 78782874 -171904980 - Charlie8 DNA MER1_type -2152 265 51 2262 92 0 0 chr2 78783734 78784047 -171903807 + AluSp SINE Alu 1 313 0 251 320 39 19 chr2 78784047 78784150 -171903704 + MER5A DNA MER1_type 64 168 -21 333 307 73 0 chr2 78784809 78784959 -171902895 + L1ME LINE L1 5522 5682 -439 13555 131 76 9 chr2 78785027 78786446 -171901408 + Tigger1 DNA MER2_type 3 1631 -787 2105 119 7 7 chr2 78786446 78786741 -171901113 - AluSx SINE Alu -17 295 1 13555 131 76 9 chr2 78786741 78787586 -171900268 + Tigger1 DNA MER2_type 1631 2418 0 279 0 0 0 chr2 78788585 78788616 -171899238 + (TG)n Simple_repeat Simple_repeat 2 32 0 802 213 40 15 chr2 78788768 78788970 -171898884 + Tigger1 DNA MER2_type 2212 2418 0 1224 271 147 11 chr2 78791907 78792369 -171895485 + MER69B DNA AcHobo 1 525 -701 511 212 245 4 chr2 78792366 78792611 -171895243 + MER69B DNA AcHobo 768 1071 -155 * 434 217 100 0 chr2 78792778 78792898 -171894956 + MER69B DNA AcHobo 1086 1217 -9 2088 102 7 3 chr2 78793507 78793838 -171894016 + AluSx SINE Alu 1 332 0 2685 282 79 14 chr2 78793963 78794454 -171893400 - L2 LINE L2 -5 3308 2850 4004 135 11 63 chr2 78794454 78795182 -171892672 + LTR8 LTR ERV1 2 691 0 2685 282 79 14 chr2 78795182 78795861 -171891993 - L2 LINE L2 -463 2850 2054 2416 84 0 0 chr2 78797750 78798048 -171889806 - AluY SINE Alu -13 298 1 379 294 42 21 chr2 78799538 78799681 -171888173 + MIR SINE MIR 1 146 -116 204 218 0 36 chr2 78799733 78799788 -171888066 + (TTA)n Simple_repeat Simple_repeat 2 54 0 2124 137 0 0 chr2 78799864 78800156 -171887698 + AluSx SINE Alu 1 292 -20 412 213 43 0 chr2 78800395 78800489 -171887365 - Tigger7 DNA MER2_type -2 2489 2392 1460 199 0 11 chr2 78800494 78800756 -171887098 - Tigger7 DNA MER2_type -2228 259 1 180 111 0 0 chr2 78800762 78800789 -171887065 + (CA)n Simple_repeat Simple_repeat 2 28 0 258 222 22 22 chr2 78800793 78800817 -171887037 + (TA)n Simple_repeat Simple_repeat 1 24 -66 2695 130 7 25 chr2 78800817 78801255 -171886599 + Tigger2a DNA MER2_type 5 434 0 258 222 22 22 chr2 78801255 78801320 -171886534 + (TA)n Simple_repeat Simple_repeat 23 90 0 225 0 0 0 chr2 78801321 78801346 -171886508 + (TG)n Simple_repeat Simple_repeat 2 26 0 262 178 41 14 chr2 78801552 78801625 -171886229 - MLT1K LTR MaLR -355 233 159 614 303 48 21 chr2 78803498 78803788 -171884066 - MARNA DNA Mariner -16 570 273 40 0 0 0 chr2 78803815 78803855 -171883999 + AT_rich Low_complexity Low_complexity 1 40 0 531 262 108 35 chr2 78804214 78804434 -171883420 + MIR SINE MIR 6 240 -22 5638 21 6 0 chr2 78805670 78806379 -171881475 - L1PA3 LINE L1 -3172 2974 2262 19921 34 1 0 chr2 78806379 78809570 -171878284 + L1PA3 LINE L1 2964 6155 0 218 119 24 0 chr2 78809951 78809993 -171877861 + (TA)n Simple_repeat Simple_repeat 1 43 0 1781 157 6 38 chr2 78810314 78810632 -171877222 + AluSx SINE Alu 3 310 -2 190 179 77 0 chr2 78811735 78811774 -171876080 + MER5B DNA MER1_type 136 177 -1 * 408 250 40 0 chr2 78811774 78811872 -171875982 + MER5A DNA MER1_type 11 112 -77 224 216 255 39 chr2 78811795 78811897 -171875957 - MER5A DNA MER1_type -23 166 43 * 280 203 8 144 chr2 78812111 78812160 -171875694 - MER5A DNA MER1_type -25 164 139 1021 47 31 0 chr2 78812160 78812289 -171875565 + L1PA11 LINE L1 6041 6173 -1 280 203 8 144 chr2 78812289 78812357 -171875497 - MER5A DNA MER1_type -50 139 63 1984 178 25 2 chr2 78812501 78812948 -171874906 - MER89 LTR ERV1 -2 557 1 235 319 28 0 chr2 78812952 78813024 -171874830 + MER5A DNA MER1_type 82 155 -34 231 220 0 0 chr2 78813554 78813604 -171874250 - Charlie8 DNA MER1_type -1000 1417 1368 536 275 163 41 chr2 78813623 78814088 -171873766 - Charlie8 DNA MER1_type -1893 524 3 21 57 0 0 chr2 78816464 78816499 -171871355 + AT_rich Low_complexity Low_complexity 1 35 0 407 385 66 14 chr2 78817363 78817576 -171870278 - L2 LINE L2 -18 3254 3031 41 21 0 0 chr2 78818866 78818914 -171868940 + AT_rich Low_complexity Low_complexity 1 48 0 424 272 209 24 chr2 78820006 78820465 -171867389 - L1M4 LINE L1 -2688 3458 2915 502 238 167 39 chr2 78821030 78821312 -171866542 - MLT1K LTR MaLR -139 449 132 435 250 48 24 chr2 78822259 78822383 -171865471 - L2 LINE L2 0 3272 3146 1451 279 79 16 chr2 78822583 78823100 -171864754 + MER115 DNA AcHobo 144 693 0 199 328 61 101 chr2 78824216 78824594 -171863260 + L2 LINE L2 2848 3210 -62 1981 166 11 25 chr2 78824684 78825052 -171862802 + MLT1A1 LTR MaLR 1 363 -2 601 266 113 5 chr2 78825273 78825476 -171862378 - MIR SINE MIR -37 225 1 201 280 11 75 chr2 78825675 78825768 -171862086 - L2 LINE L2 0 3272 3186 238 308 75 15 chr2 78825831 78825964 -171861890 + L2 LINE L2 2501 2641 -673 261 354 99 58 chr2 78826109 78826352 -171861502 - L2 LINE L2 -2 3270 3018 264 343 39 0 chr2 78827288 78827390 -171860464 - MIR SINE MIR -136 126 21 378 0 0 0 chr2 78827674 78827716 -171860138 + (TAA)n Simple_repeat Simple_repeat 2 43 0 183 100 0 0 chr2 78828093 78828123 -171859731 + (TC)n Simple_repeat Simple_repeat 1 30 0 1599 242 65 15 chr2 78828747 78828889 -171858965 + L1ME1 LINE L1 5666 5799 -367 2380 171 39 12 chr2 78828889 78829304 -171858550 - MSTB LTR MaLR 0 426 1 1599 242 65 15 chr2 78829304 78829636 -171858218 + L1ME1 LINE L1 5799 6164 -2 386 248 105 0 chr2 78829637 78829742 -171858112 + MER5B DNA MER1_type 31 146 -32 90 19 0 0 chr2 78830304 78830408 -171857446 + AT_rich Low_complexity Low_complexity 1 104 0 189 0 0 0 chr2 78831029 78831050 -171856804 + (T)n Simple_repeat Simple_repeat 1 21 0 399 343 39 31 chr2 78832133 78832387 -171855467 + MIR SINE MIR 2 257 -5 2802 200 48 0 chr2 78832812 78832851 -171855003 - MLT2B3 LTR ERVL -3 551 515 293 47 23 0 chr2 78832851 78832894 -171854960 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 2802 200 48 0 chr2 78832894 78833166 -171854688 - MLT2B3 LTR ERVL -39 515 202 381 22 0 0 chr2 78833166 78833212 -171854642 + (GA)n Simple_repeat Simple_repeat 1 46 0 2802 200 48 0 chr2 78833212 78833425 -171854429 - MLT2B3 LTR ERVL -352 202 1 1352 218 19 111 chr2 78833703 78834378 -171853476 - L1MC5 LINE L1 -576 7385 6773 239 303 10 0 chr2 78834535 78834634 -171853220 + L1ME3A LINE L1 2423 2522 -3624 929 186 27 57 chr2 78834692 78834955 -171852899 - MLT1C LTR MaLR -212 255 1 6120 89 67 5 chr2 78834975 78835638 -171852216 - L1PA13 LINE L1 -4 6159 5538 236 0 88 0 chr2 78835638 78835672 -171852182 + T-rich Low_complexity Low_complexity 1 37 0 2125 99 4 0 chr2 78835672 78835944 -171851910 - AluSc SINE Alu -36 273 1 6120 89 67 5 chr2 78835944 78836412 -171851442 - L1PA13 LINE L1 -624 5539 5006 1535 299 78 17 chr2 78836412 78837779 -171850075 + L1ME3A LINE L1 4038 5492 -672 330 64 0 0 chr2 78837829 78837876 -171849978 - MADE1 DNA Mariner -3 77 31 1018 261 48 24 chr2 78837897 78838357 -171849497 + L1ME3A LINE L1 5693 6163 -7 509 281 78 20 chr2 78838586 78838739 -171849115 - MER5B DNA MER1_type -9 169 8 458 345 24 44 chr2 78838739 78839197 -171848657 + ERVL LTR ERVL 1220 1668 -3986 464 291 0 10 chr2 78839879 78839982 -171847872 + MER5A DNA MER1_type 86 187 -2 11172 210 63 7 chr2 78840193 78842245 -171845609 - L1PA16 LINE L1 -9 6860 4925 2593 47 0 0 chr2 78842245 78842542 -171845312 - AluY SINE Alu -4 307 11 11172 210 63 7 chr2 78842542 78844605 -171843249 - L1PA16 LINE L1 -1944 4925 2528 387 0 0 0 chr2 78845586 78845629 -171842225 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1176 146 5 0 chr2 78845630 78845822 -171842032 - L1PA16 LINE L1 -4307 2542 2350 34740 99 8 8 chr2 78846140 78852277 -171835577 - L1PA6 LINE L1 -7 6147 11 723 357 23 11 chr2 78852472 78852934 -171834920 + ERVL LTR ERVL 3198 3709 -1985 1582 306 42 29 chr2 78852990 78853794 -171834060 + ERVL LTR ERVL 3841 4655 -1109 431 285 35 23 chr2 78853841 78854013 -171833841 + ERVL LTR ERVL 4705 4878 -776 1610 258 137 28 chr2 78854173 78854925 -171832929 + L1ME3 LINE L1 5320 6153 -9 451 267 59 11 chr2 78855209 78855396 -171832458 + LTR67 LTR ERVL 360 555 -2 705 358 74 44 chr2 78855523 78856222 -171831632 - L2 LINE L2 -430 2884 2165 1137 128 0 0 chr2 78856297 78856477 -171831377 + (TA)n Simple_repeat Simple_repeat 1 180 0 225 111 0 0 chr2 78856488 78856533 -171831321 - LTR66 LTR ERVL -171 439 395 243 61 0 0 chr2 78856542 78856575 -171831279 + (CA)n Simple_repeat Simple_repeat 2 34 0 843 301 7 34 chr2 78856969 78857238 -171830616 + MLT1H LTR MaLR 1 262 -287 659 188 8 8 chr2 78857303 78857431 -171830423 + MLT1H LTR MaLR 398 525 -24 454 272 89 0 chr2 78857493 78857651 -171830203 + HAL1 LINE L1 2 173 -2334 578 149 0 28 chr2 78857788 78857895 -171829959 + LTR28 LTR ERV1 1 104 -916 1838 167 14 52 chr2 78857952 78858378 -171829476 + LTR27 LTR ERV1 89 498 -138 303 318 172 10 chr2 78858593 78858785 -171829069 - L1 LINE L1 -1819 4327 4105 376 218 98 53 chr2 78858824 78858957 -171828897 + L1ME2 LINE L1 6007 6145 -19 1575 158 41 75 chr2 78859137 78859524 -171828330 + MLT1A2 LTR MaLR 1 374 0 548 316 116 38 chr2 78860039 78860771 -171827083 - L1 LINE L1 -3045 3101 2269 928 185 8 51 chr2 78860915 78861169 -171826685 - L1MB8 LINE L1 0 6178 5936 1097 267 52 16 chr2 78861169 78861596 -171826258 - L1M4 LINE L1 -2078 4879 4438 2952 238 53 27 chr2 78861608 78862493 -171825361 - L1M4 LINE L1 -5180 1679 772 698 224 81 14 chr2 78862509 78862719 -171825135 + L1M4b LINE L1 24 247 -6612 * 1596 168 13 0 chr2 78862718 78863021 -171824833 + L1 LINE L1 3743 4049 -2097 2307 148 8 36 chr2 78863022 78863492 -171824362 - MER50-int LTR ERV1 -2145 2870 2063 6287 90 2 0 chr2 78863494 78865055 -171822799 - L1PA8 LINE L1 -3 6169 4594 2036 127 0 0 chr2 78865055 78865371 -171822483 - L1PA8 LINE L1 -1772 4374 4059 2722 146 14 18 chr2 78865411 78865904 -171821950 - MER50-int LTR ERV1 -804 4076 3586 627 212 0 0 chr2 78865901 78866014 -171821840 - MER50-int LTR ERV1 -4305 2900 2788 * 5739 162 21 38 chr2 78866010 78866960 -171820894 - MER50-int LTR ERV1 -5355 1850 866 2380 102 0 6 chr2 78866960 78867273 -171820581 + AluY SINE Alu 1 311 0 5739 162 21 38 chr2 78867273 78868124 -171819730 - MER50-int LTR ERV1 -6339 866 1 3213 183 54 15 chr2 78868125 78868809 -171819045 - MER50 LTR ERV1 -23 711 1 2560 237 27 5 chr2 78868809 78869560 -171818294 + L1PB2 LINE L1 2859 3625 -2521 2997 100 53 0 chr2 78869560 78869990 -171817864 - MLT2A2 LTR ERVL 0 453 1 20635 73 5 2 chr2 78869990 78872751 -171815103 - HERVL-A2 LTR ERVL 0 5654 2887 7995 86 2 38 chr2 78872756 78873975 -171813879 - HERVL-A2 LTR ERVL -4479 1175 1 3161 91 36 2 chr2 78873975 78874413 -171813441 - MLT2A2 LTR ERVL 0 453 1 7535 150 8 26 chr2 78874418 78875951 -171811903 + L1PB2 LINE L1 3625 5093 -1058 2336 128 25 8 chr2 78875951 78876309 -171811545 + THE1B LTR MaLR 1 364 0 7535 150 8 26 chr2 78876309 78877348 -171810506 + L1PB2 LINE L1 5093 6149 -2 1415 178 7 0 chr2 78877356 78877637 -171810217 + L1 LINE L1 4318 4600 -1546 1920 123 70 50 chr2 78878167 78878524 -171809330 + THE1B LTR MaLR 1 364 0 340 290 92 49 chr2 78878524 78879152 -171808702 - HAL1b LINE L1 -523 825 135 4442 140 14 32 chr2 78879226 78880040 -171807814 - L1MA5 LINE L1 -5 6295 5497 772 92 92 7 chr2 78880040 78880181 -171807673 + L1MA5 LINE L1 6143 6295 -5 2164 165 24 29 chr2 78880201 78880711 -171807143 + L1 LINE L1 4358 4864 -1282 1709 192 11 22 chr2 78880813 78881173 -171806681 - MLT1C LTR MaLR 0 467 112 604 81 12 0 chr2 78881184 78881270 -171806584 - AluSp/q SINE Alu -18 295 209 315 282 111 0 chr2 78881561 78881678 -171806176 + HsTC2 DNA Tc2 1 130 -1768 984 172 10 0 chr2 78881692 78881895 -171805959 + L1 LINE L1 4481 4685 -1461 2083 247 11 6 chr2 78881896 78882422 -171805432 + HsTC2 DNA Tc2 132 660 -1238 24 32 0 0 chr2 78883921 78883952 -171803902 + AT_rich Low_complexity Low_complexity 1 31 0 576 282 70 78 chr2 78884751 78885109 -171802745 - HAL1 LINE L1 -1635 872 518 356 242 42 0 chr2 78886029 78886124 -171801730 + MIR SINE MIR 108 206 -56 242 328 0 0 chr2 78886246 78886307 -171801547 - L3 LINE CR1 -157 1420 1360 443 271 42 73 chr2 78886424 78886782 -171801072 - L1MEc LINE L1 -4637 1759 1413 3032 248 116 22 chr2 78886833 78888811 -171799043 + L1M4 LINE L1 1246 3104 -4002 3652 135 36 6 chr2 78888815 78889453 -171798401 + L1MA8 LINE L1 5628 6284 -7 1527 215 30 94 chr2 78889553 78890087 -171797767 - MLT1D LTR MaLR 0 505 6 1962 139 23 57 chr2 78890815 78891203 -171796651 - THE1C LTR MaLR 0 375 1 772 347 160 34 chr2 78891372 78892148 -171795706 + L3 LINE CR1 693 1566 -11 475 309 89 34 chr2 78892578 78892902 -171794952 + LTR16C LTR ERVL 150 491 0 198 136 0 0 chr2 78893302 78893346 -171794508 + (A)n Simple_repeat Simple_repeat 1 44 0 262 349 61 30 chr2 78894827 78894959 -171792895 - MIR3 SINE MIR -2 206 71 189 378 103 6 chr2 78895248 78895404 -171792450 - L2 LINE L2 0 3272 3102 229 190 0 0 chr2 78896004 78896062 -171791792 + L1M4 LINE L1 4842 4899 -2207 377 280 0 0 chr2 78896093 78896193 -171791661 - U13 snRNA snRNA -4 100 1 407 349 48 11 chr2 78896428 78896617 -171791237 + L2 LINE L2 3117 3312 -1 325 278 61 33 chr2 78896632 78896812 -171791042 + L1M4 LINE L1 17 201 -6341 253 296 0 31 chr2 78897217 78897315 -171790539 + L1M4 LINE L1 786 880 -5662 313 322 144 7 chr2 78897378 78897524 -171790330 + L1M4 LINE L1 895 1060 -5486 408 90 0 0 chr2 78897544 78897611 -171790243 - AluSp SINE Alu 0 313 247 1543 88 5 0 chr2 78897612 78897806 -171790048 - AluSp SINE Alu -116 197 3 267 148 91 102 chr2 78897807 78897895 -171789959 + L1M4 LINE L1 1046 1132 -5410 330 272 150 0 chr2 78898066 78898246 -171789608 + LTR33A LTR ERVL 263 469 -54 580 246 18 18 chr2 78898252 78898423 -171789431 - L1MC/D LINE L1 -2040 5768 5598 298 265 80 13 chr2 78899383 78899532 -171788322 - L1ME LINE L1 -5913 157 2 2348 149 17 15 chr2 78900248 78900658 -171787196 - Tigger2a DNA MER2_type 0 434 24 3862 146 14 32 chr2 78900745 78900790 -171787064 + L1MA9 LINE L1 5432 5476 -836 396 103 0 0 chr2 78900790 78900848 -171787006 + (CA)n Simple_repeat Simple_repeat 2 59 0 3862 146 14 32 chr2 78900848 78901175 -171786679 + L1MA9 LINE L1 5476 5808 -504 1588 175 100 6 chr2 78901175 78901506 -171786348 + MLT1A1 LTR MaLR 2 363 -2 3862 146 14 32 chr2 78901506 78901870 -171785984 + L1MA9 LINE L1 5808 6155 -157 372 180 54 63 chr2 78901903 78902014 -171785840 + L1MA10 LINE L1 6094 6203 -131 327 246 0 0 chr2 78902046 78902111 -171785743 - MER5A DNA MER1_type -1 188 124 231 340 21 35 chr2 78902115 78902256 -171785598 - LTR27 LTR ERV1 0 636 498 3165 193 82 54 chr2 78902283 78903128 -171784726 - LTR28 LTR ERV1 -67 953 86 514 193 14 117 chr2 78903159 78903228 -171784626 - MER5A DNA MER1_type -59 130 82 180 0 0 0 chr2 78903237 78903257 -171784597 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 4996 86 5 3 chr2 78903257 78903886 -171783968 - L1PA10 LINE L1 -18 6150 5518 514 193 14 117 chr2 78903886 78903961 -171783893 - MER5A DNA MER1_type -107 82 1 347 141 22 87 chr2 78903988 78904080 -171783774 + L1M4 LINE L1 4985 5070 -1076 233 348 97 19 chr2 78904235 78904380 -171783474 - L2 LINE L2 -1455 1859 1727 417 20 0 0 chr2 78904380 78904430 -171783424 + (TG)n Simple_repeat Simple_repeat 2 51 0 233 348 97 19 chr2 78904430 78904551 -171783303 - L2 LINE L2 -1587 1727 1572 2398 205 33 2 chr2 78907364 78907815 -171780039 - MLT1D LTR MaLR -1 504 40 865 137 0 0 chr2 78907815 78907939 -171779915 - MER4E LTR ERV1 0 766 643 2099 84 21 11 chr2 78907939 78908331 -171779523 + LTR7 LTR ERV1 1 442 -8 2343 129 63 87 chr2 78908338 78908842 -171779012 - MER4B LTR ERV1 -118 492 1 310 231 122 118 chr2 78908918 78908967 -171778887 - Charlie8 DNA MER1_type 0 1428 1381 2387 157 35 39 chr2 78908967 78909399 -171778455 - MSTB1 LTR MaLR -2 430 1 310 231 122 118 chr2 78909399 78909587 -171778267 - Charlie8 DNA MER1_type -47 1381 92 1100 215 3 26 chr2 78909721 78910020 -171777834 + L1MD1 LINE L1 5194 5487 -750 5679 157 26 11 chr2 78910024 78910980 -171776874 + L1P3 LINE L1 11 981 -4894 10833 97 28 3 chr2 78910980 78913231 -171774623 + L1PA8 LINE L1 3900 6170 -2 6533 116 2 13 chr2 78913218 78914425 -171773429 + L1PA8 LINE L1 4976 6172 0 * 2899 36 15 3 chr2 78914436 78914769 -171773085 - L1PA5 LINE L1 0 6154 5818 27 0 0 0 chr2 78914774 78914801 -171773053 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr2 78915268 78915296 -171772558 + AT_rich Low_complexity Low_complexity 1 28 0 450 229 114 17 chr2 78915370 78915545 -171772309 - L1ME3A LINE L1 -214 5956 5765 4012 163 60 9 chr2 78915557 78916293 -171771561 + L1MD1 LINE L1 5470 6242 0 645 191 72 62 chr2 78916719 78916913 -171770941 - HsTC2 DNA Tc2 0 1900 1705 975 203 27 45 chr2 78917021 78917243 -171770611 - MER20 DNA MER1_type -1 218 1 296 292 43 27 chr2 78917388 78917550 -171770304 - L1ME3A LINE L1 -387 5791 5628 400 182 74 178 chr2 78918267 78918509 -171769345 - MER112 DNA MER1_type -43 217 1 813 305 96 20 chr2 78918530 78918927 -171768927 - LTR16B LTR ERVL 0 464 38 221 294 0 0 chr2 78919028 78919079 -171768775 + MIR SINE MIR 17 67 -195 357 260 154 0 chr2 78919079 78919202 -171768652 - MER96 DNA MER1_type? 0 175 34 5015 96 19 22 chr2 78919202 78919591 -171768263 + L1PB3 LINE L1 5469 5858 -296 243 0 0 0 chr2 78919591 78919618 -171768236 + (TC)n Simple_repeat Simple_repeat 2 28 0 2121 121 3 3 chr2 78919618 78919915 -171767939 - AluSp SINE Alu -16 297 1 5015 96 19 22 chr2 78919915 78920212 -171767642 + L1PB3 LINE L1 5856 6154 0 435 192 88 93 chr2 78920230 78920412 -171767442 + MIR SINE MIR 56 236 -26 401 234 7 95 chr2 78920462 78920599 -171767255 - MER5A DNA MER1_type -48 141 17 700 260 82 19 chr2 78921617 78921825 -171766029 - MIR SINE MIR -13 249 29 689 272 21 11 chr2 78922335 78922526 -171765328 - MIR SINE MIR -18 244 52 209 294 35 35 chr2 78922787 78922872 -171764982 - L2 LINE L2 -6 3307 3223 342 80 0 0 chr2 78923335 78923385 -171764469 + (TG)n Simple_repeat Simple_repeat 2 51 0 488 162 214 8 chr2 78924014 78924131 -171763723 - MLT1F LTR MaLR 0 542 402 669 154 0 0 chr2 78924133 78924224 -171763630 - AluS SINE Alu -221 91 1 1019 241 77 36 chr2 78924233 78924569 -171763285 - MLT1F LTR MaLR -169 373 24 2284 82 17 0 chr2 78925379 78925671 -171762183 + AluSp SINE Alu 1 297 -16 1277 256 108 60 chr2 78925740 78926376 -171761478 + L1ME LINE L1 30 696 -5374 1913 157 13 3 chr2 78926408 78926708 -171761146 + AluSx SINE Alu 1 303 -9 2504 69 0 0 chr2 78926725 78927031 -171760823 + AluY SINE Alu 1 306 -5 600 254 6 6 chr2 78927035 78927200 -171760654 + L1ME LINE L1 843 1007 -5063 616 189 34 2 chr2 78977966 78978110 -171709744 - MER106B DNA MER1_type -18 218 62 183 298 35 94 chr2 78978115 78978286 -171709568 + L3 LINE CR1 934 1094 -483 812 164 13 13 chr2 78978630 78978789 -171709065 + L1MD3 LINE L1 7731 7889 -106 401 243 162 11 chr2 78978923 78979108 -171708746 + L1ME4a LINE L1 5684 5896 -225 1770 83 44 0 chr2 78979141 78979369 -171708485 + AluSc SINE Alu 60 297 -12 298 200 0 18 chr2 78980654 78980764 -171707090 + (TA)n Simple_repeat Simple_repeat 1 108 0 3804 56 13 0 chr2 78980765 78981232 -171706622 - L1PA7 LINE L1 -16 6138 5666 306 213 107 49 chr2 78983599 78983721 -171704133 + L1 LINE L1 5172 5300 -846 627 259 0 7 chr2 78983728 78983871 -171703983 + MLT1A2 LTR MaLR 187 328 -46 214 167 0 0 chr2 78983871 78983907 -171703947 + GA-rich Low_complexity Low_complexity 6 41 0 591 308 142 4 chr2 78983961 78984470 -171703384 + L1MC4a LINE L1 5373 5951 -1857 1470 243 35 27 chr2 78985467 78985870 -171701984 - MLT1I LTR MaLR -3 406 1 204 266 16 16 chr2 78986114 78986178 -171701676 - MER5B DNA MER1_type 0 178 115 195 337 12 36 chr2 78986220 78986303 -171701551 - MER5A DNA MER1_type -50 139 59 1703 236 93 102 chr2 78986328 78987040 -171700814 + MER21B LTR ERV1 20 724 -139 556 227 7 57 chr2 78987297 78987334 -171700520 - MLT1G1 LTR MaLR 0 595 558 2493 62 7 0 chr2 78987334 78987642 -171700212 + AluY SINE Alu 1 310 -1 556 227 7 57 chr2 78987642 78987745 -171700109 - MLT1G1 LTR MaLR -37 558 462 430 267 90 74 chr2 78987758 78988113 -171699741 - MLT1G1 LTR MaLR -182 366 15 263 326 21 0 chr2 78988738 78988833 -171699021 + MIR3 SINE MIR 112 208 0 537 296 24 73 chr2 78989194 78989319 -171698535 + MIR SINE MIR 28 158 -104 2014 125 21 0 chr2 78989319 78989606 -171698248 + AluSx SINE Alu 1 293 -19 2133 133 0 0 chr2 78989607 78989929 -171697925 + AluSx SINE Alu 1 322 0 537 296 24 73 chr2 78989929 78990047 -171697807 + MIR SINE MIR 157 262 0 1516 207 60 71 chr2 78991302 78991766 -171696088 + MLT1C LTR MaLR 1 459 -8 185 361 79 31 chr2 78992259 78992486 -171695368 + L2 LINE L2 2836 3073 -199 256 221 132 66 chr2 78992644 78992780 -171695074 - L2 LINE L2 0 3313 3169 22 0 0 0 chr2 78993122 78993144 -171694710 + AT_rich Low_complexity Low_complexity 1 22 0 387 0 0 0 chr2 78993452 78993495 -171694359 + (TG)n Simple_repeat Simple_repeat 2 44 0 519 275 25 0 chr2 78993498 78993618 -171694236 - FLAM_A SINE Alu -19 123 1 440 316 150 31 chr2 78993636 78994149 -171693705 - L1MC4a LINE L1 -1976 5832 5259 414 308 152 45 chr2 78994160 78994667 -171693187 - L1MC4a LINE L1 -904 5242 4682 2821 159 20 4 chr2 78995317 78995777 -171692077 + MLT1C LTR MaLR 1 467 0 275 256 24 12 chr2 78996212 78996294 -171691560 + L2 LINE L2 3231 3313 0 191 59 0 59 chr2 78996754 78996788 -171691066 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 660 266 59 5 chr2 78998234 78998437 -171689417 + MIR SINE MIR 20 233 -29 1278 202 57 4 chr2 79000784 79001032 -171686822 - AluJo SINE Alu -30 282 22 225 337 0 27 chr2 79001353 79001537 -171686317 + C-rich Low_complexity Low_complexity 2 180 0 * 380 146 38 90 chr2 79001405 79001948 -171685906 + (CACCAT)n Simple_repeat Simple_repeat 1 514 0 1265 246 117 35 chr2 79002851 79003331 -171684523 - LTR33A LTR ERVL 0 523 5 180 0 0 0 chr2 79003483 79003503 -171684351 + (G)n Simple_repeat Simple_repeat 1 20 0 241 231 29 96 chr2 79003512 79003616 -171684238 - L2 LINE L2 -225 3047 2951 244 307 96 64 chr2 79003847 79004098 -171683756 + L2 LINE L2 2995 3253 -19 404 290 22 22 chr2 79004666 79004804 -171683050 + L1ME4a LINE L1 5740 5877 -244 1743 173 10 10 chr2 79004818 79005113 -171682741 - AluJb SINE Alu -17 295 1 21 36 0 0 chr2 79005232 79005260 -171682594 + AT_rich Low_complexity Low_complexity 1 28 0 281 301 84 14 chr2 79005585 79005728 -171682126 + MIR SINE MIR 82 234 -28 1299 167 139 12 chr2 79005912 79006170 -171681684 + AluJo SINE Alu 1 291 -21 573 324 84 13 chr2 79006457 79006682 -171681172 - MIR SINE MIR 0 262 22 333 199 0 48 chr2 79006826 79006977 -171680877 + L1MC4 LINE L1 2006 6983 -1339 1126 214 115 54 chr2 79007144 79007517 -171680337 - MSTD LTR MaLR 0 396 1 287 176 0 0 chr2 79007893 79007944 -171679910 - L2 LINE L2 0 3313 3263 1781 160 56 3 chr2 79008710 79009047 -171678807 - MER46B DNA MER2_type -1 235 6 1195 218 114 19 chr2 79009188 79009250 -171678604 + MER58B DNA MER1_type 5 60 -2360 2228 192 38 65 chr2 79009250 79009734 -171678120 + MER74A LTR ERVL 1 469 -89 2087 154 3 0 chr2 79009734 79010045 -171677809 - AluSx SINE Alu 0 312 1 2228 192 38 65 chr2 79010045 79010133 -171677721 + MER74A LTR ERVL 469 558 0 1195 218 114 19 chr2 79010133 79010378 -171677476 + MER58B DNA MER1_type 60 341 0 458 240 115 5 chr2 79010557 79010749 -171677105 + MER112 DNA MER1_type 17 229 -31 234 310 0 0 chr2 79011091 79011149 -171676705 + L2 LINE L2 3203 3260 -12 781 203 34 23 chr2 79012095 79012272 -171675582 + MER97a DNA MER1_type? 1 179 -715 274 292 68 61 chr2 79012310 79012574 -171675280 + L2 LINE L2 1837 2102 -1212 419 248 81 19 chr2 79014062 79014272 -171673582 + L1ME LINE L1 5257 5479 -642 981 174 70 16 chr2 79014311 79014553 -171673301 - L1MA4 LINE L1 -11 6289 6035 2001 114 3 28 chr2 79014663 79014973 -171672881 - AluSx SINE Alu 0 303 1 257 332 47 35 chr2 79015497 79015729 -171672125 - L2 LINE L2 -951 2363 2129 372 154 0 7 chr2 79016255 79016497 -171671357 + AluJb SINE Alu 2 302 0 295 179 71 48 chr2 79017015 79017099 -171670755 + L2 LINE L2 2238 2323 -991 22 0 0 0 chr2 79017421 79017443 -171670411 + AT_rich Low_complexity Low_complexity 1 22 0 773 164 0 0 chr2 79017453 79017575 -171670279 - FLAM_C SINE Alu -21 122 1 632 134 35 6 chr2 79017631 79017803 -171670051 + (TA)n Simple_repeat Simple_repeat 2 178 0 314 252 0 63 chr2 79017805 79017916 -171669938 + L1MC4 LINE L1 6597 6700 -1342 245 182 68 0 chr2 79017916 79018004 -171669850 + (TA)n Simple_repeat Simple_repeat 2 95 0 521 239 54 49 chr2 79018093 79018298 -171669556 + U3 snRNA snRNA 6 211 -6 437 251 122 32 chr2 79018696 79018943 -171668911 - L1ME LINE L1 -334 5787 5519 228 217 0 0 chr2 79018964 79019010 -171668844 + CT-rich Low_complexity Low_complexity 1 46 0 2404 97 0 22 chr2 79019570 79019889 -171667965 - AluSx SINE Alu 0 312 1 1807 180 3 0 chr2 79019893 79020188 -171667666 - AluJo SINE Alu -16 296 1 1722 162 0 0 chr2 79020644 79020910 -171666944 + AluSx SINE Alu 5 270 -42 306 92 40 0 chr2 79020911 79020972 -171666882 + AluSc SINE Alu 240 293 -6 402 304 98 27 chr2 79021050 79021346 -171666508 - L2 LINE L2 -669 2645 2329 437 287 27 48 chr2 79022503 79022691 -171665163 + MER5A DNA MER1_type 1 184 -5 298 91 36 0 chr2 79022781 79022836 -171665018 + T-rich Low_complexity Low_complexity 4 60 0 240 284 101 61 chr2 79022966 79023114 -171664740 + MIR SINE MIR 20 173 -89 1978 146 0 13 chr2 79023389 79023691 -171664163 - AluJo SINE Alu -10 302 5 231 242 0 0 chr2 79023879 79023941 -171663913 + U3 snRNA snRNA 3 64 -153 1907 145 10 0 chr2 79024653 79024943 -171662911 + AluSx SINE Alu 1 293 -19 1982 188 41 2 chr2 79025572 79025986 -171661868 + LTR40c LTR ERVL 24 453 -12 1985 117 71 71 chr2 79026848 79026917 -171660937 - Tigger2a DNA MER2_type -2274 434 366 2395 93 3 6 chr2 79026917 79027229 -171660625 + AluSp SINE Alu 1 311 -2 1985 117 71 71 chr2 79027229 79027569 -171660285 - Tigger2a DNA MER2_type -2341 367 25 331 316 155 35 chr2 79027593 79028427 -171659427 + L2 LINE L2 1916 2849 -465 182 387 11 11 chr2 79028953 79029046 -171658808 + L2 LINE L2 3006 3098 -174 233 236 66 9 chr2 79029194 79029295 -171658559 + MIR SINE MIR 81 193 -69 1409 187 0 7 chr2 79029447 79029736 -171658118 + L1MA4 LINE L1 4939 5225 -921 5289 143 25 21 chr2 79029737 79030732 -171657122 + L1MA4 LINE L1 5274 6272 -28 1394 213 97 3 chr2 79031725 79032054 -171655800 - MLT1F1 LTR MaLR -2 565 206 2295 87 7 13 chr2 79032100 79032409 -171655445 - AluSg SINE Alu -3 307 1 3554 210 11 5 chr2 79032544 79033402 -171654452 - L1 LINE L1 -1052 5094 4232 791 126 0 7 chr2 79033509 79033644 -171654210 + L1MA9 LINE L1 6179 6312 0 301 306 75 6 chr2 79033651 79033811 -171654043 - MIR SINE MIR -26 236 66 235 256 23 159 chr2 79033779 79033894 -171653960 + L2 LINE L2 2478 2562 -752 * 876 245 5 5 chr2 79033894 79034082 -171653772 - MER5A DNA MER1_type 0 189 2 235 256 23 159 chr2 79034082 79034142 -171653712 + L2 LINE L2 2562 2629 -685 224 324 149 0 chr2 79034197 79034271 -171653583 - L2 LINE L2 -15 3298 3214 550 312 76 46 chr2 79035212 79035606 -171652248 - L2 LINE L2 -624 2690 2285 2118 91 46 26 chr2 79035667 79035974 -171651880 - AluSq SINE Alu 0 313 1 700 165 16 16 chr2 79035979 79036106 -171651748 - FLAM_C SINE Alu -6 127 1 1038 154 11 6 chr2 79036297 79036472 -171651382 + AluJo SINE Alu 119 294 -18 215 342 138 36 chr2 79036487 79036791 -171651063 - L2 LINE L2 -42 3230 2896 933 131 49 27 chr2 79038010 79038193 -171649661 - AluJo SINE Alu -4 308 122 291 302 107 13 chr2 79038454 79038709 -171649145 + L1ME3A LINE L1 5661 5939 -231 2178 100 0 35 chr2 79038713 79039024 -171648830 + AluSg SINE Alu 1 300 -10 743 278 116 44 chr2 79039102 79039458 -171648396 + L1MC4 LINE L1 7357 7686 -356 1038 128 179 5 chr2 79039458 79039654 -171648200 - MER30 DNA MER1_type 0 230 1 743 278 116 44 chr2 79039654 79039787 -171648067 + L1MC4 LINE L1 7686 7808 -234 1464 157 50 18 chr2 79039787 79040067 -171647787 - AluJo SINE Alu -23 289 1 743 278 116 44 chr2 79040067 79040216 -171647638 + L1MC4 LINE L1 7808 8042 0 435 296 92 58 chr2 79041878 79042118 -171645736 + MIR SINE MIR 12 259 -3 766 295 179 12 chr2 79043730 79044144 -171643710 + L2 LINE L2 2156 2638 -676 901 206 31 0 chr2 79044154 79044348 -171643506 - MLT1A1 LTR MaLR 0 365 166 189 0 0 0 chr2 79045166 79045187 -171642667 + (T)n Simple_repeat Simple_repeat 1 21 0 1081 242 253 30 chr2 79046564 79047399 -171640455 - HAL1 LINE L1 -718 1789 769 286 182 0 0 chr2 79047451 79047506 -171640348 - HAL1 LINE L1 -1821 686 632 758 200 39 15 chr2 79048003 79048208 -171639646 - L1MB4 LINE L1 0 6180 5971 1261 185 66 4 chr2 79048213 79048440 -171639414 - AluJo SINE Alu -15 297 57 1097 162 34 8 chr2 79048441 79048676 -171639178 - L1MB4 LINE L1 -322 5858 5618 821 244 84 0 chr2 79048686 79048985 -171638869 - L1M4 LINE L1 -3228 3416 3093 5359 205 118 24 chr2 79048993 79051016 -171636838 - L1M4 LINE L1 -3840 2804 611 327 262 92 49 chr2 79051273 79051437 -171636417 - L1M4 LINE L1 -6281 261 91 723 186 0 8 chr2 79051473 79051597 -171636257 - FLAM_C SINE Alu -10 123 1 477 153 0 0 chr2 79051859 79051931 -171635923 - AluJ/FLAM SINE Alu -213 99 28 1230 200 137 49 chr2 79051936 79052447 -171635407 - L1M4 LINE L1 -1935 4211 3656 1980 155 0 19 chr2 79053712 79054029 -171633825 + AluJb SINE Alu 1 311 -1 237 287 69 0 chr2 79054236 79054337 -171633517 + L1ME LINE L1 5477 5584 -537 1854 149 3 23 chr2 79055287 79055589 -171632265 - AluJo SINE Alu -16 296 1 23 33 0 0 chr2 79056833 79056863 -171630991 + AT_rich Low_complexity Low_complexity 1 30 0 461 266 101 56 chr2 79056930 79057430 -171630424 - PABL_B LTR ERV1 0 667 1 22 0 0 0 chr2 79058003 79058025 -171629829 + AT_rich Low_complexity Low_complexity 1 22 0 1034 272 37 53 chr2 79058093 79058471 -171629383 + PABL_B LTR ERV1 1 513 -154 309 26 0 0 chr2 79058471 79058509 -171629345 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1034 272 37 53 chr2 79058509 79058662 -171629192 + PABL_B LTR ERV1 513 667 0 25 0 0 0 chr2 79058678 79058703 -171629151 + AT_rich Low_complexity Low_complexity 1 25 0 253 0 0 0 chr2 79058739 79058767 -171629087 - MER4B LTR ERV1 0 610 583 407 270 141 17 chr2 79058825 79059072 -171628782 - L1MC/D LINE L1 -371 5750 5482 375 253 35 52 chr2 79059190 79059364 -171628490 - L1MC/D LINE L1 -2383 5425 5255 290 163 43 43 chr2 79059430 79059522 -171628332 - L1MC5 LINE L1 -50 7911 7820 238 261 113 35 chr2 79059651 79059793 -171628061 - L1MC/D LINE L1 -1112 5034 4882 2077 115 28 0 chr2 79059874 79060160 -171627694 - AluSq SINE Alu -19 294 1 215 353 29 0 chr2 79061009 79061111 -171626743 + L2 LINE L2 2882 2986 -286 851 316 92 24 chr2 79061129 79061632 -171626222 + L2 LINE L2 1866 2402 -912 1375 213 68 15 chr2 79061701 79062025 -171625829 + MER58B DNA MER1_type 1 341 0 41 0 0 0 chr2 79062280 79062321 -171625533 + AT_rich Low_complexity Low_complexity 1 41 0 500 168 23 0 chr2 79062321 79062494 -171625360 + (TA)n Simple_repeat Simple_repeat 1 177 0 382 275 92 0 chr2 79062828 79062948 -171624906 - MIR SINE MIR -22 240 110 2582 45 7 0 chr2 79063164 79063473 -171624381 + AluY SINE Alu 1 311 0 1232 280 45 44 chr2 79063803 79064408 -171623446 - L1ME3A LINE L1 -314 5856 5242 28 91 0 0 chr2 79064708 79064785 -171623069 + AT_rich Low_complexity Low_complexity 1 77 0 250 238 69 0 chr2 79065259 79065375 -171622479 + L1MC4 LINE L1 7600 7744 -84 318 237 25 17 chr2 79065451 79065569 -171622285 + L1MC4 LINE L1 7922 8040 -2 2144 132 6 3 chr2 79065596 79065907 -171621947 + AluSx SINE Alu 1 312 0 869 352 173 18 chr2 79066323 79067181 -171620673 - L3 LINE CR1 -44 1533 543 183 400 32 22 chr2 79067290 79067475 -171620379 - L3 LINE CR1 -1260 317 131 1021 179 47 19 chr2 79067540 79067752 -171620102 + MER20 DNA MER1_type 2 219 0 2204 84 0 0 chr2 79067852 79068127 -171619727 + AluY SINE Alu 21 295 -16 366 279 100 7 chr2 79068181 79068321 -171619533 + MIR SINE MIR 61 213 -49 327 299 222 0 chr2 79068399 79068543 -171619311 - L3 LINE CR1 -221 1356 1181 292 286 149 20 chr2 79068757 79068887 -171618967 + MIR SINE MIR 3 146 -62 978 171 237 4 chr2 79068902 79069130 -171618724 - AluJo SINE Alu -30 282 2 210 226 131 24 chr2 79069147 79069231 -171618623 + MIR SINE MIR 166 258 -4 219 279 25 13 chr2 79069420 79069499 -171618355 - L3 LINE CR1 -399 1178 1099 1551 280 78 79 chr2 79070538 79071256 -171616598 + L2 LINE L2 1001 1717 -1597 16338 119 11 117 chr2 79071264 79074703 -171613151 + L1P LINE L1 4 3077 -3069 4879 64 8 11 chr2 79074703 79075353 -171612501 + L1PA7 LINE L1 5502 6151 -3 2601 266 56 27 chr2 79075353 79076180 -171611674 + L2 LINE L2 1704 2554 -760 755 134 0 89 chr2 79076379 79076536 -171611318 - FLAM_C SINE Alu 0 143 1 1730 172 7 10 chr2 79076596 79076899 -171610955 + AluJo SINE Alu 1 302 -10 2222 115 0 3 chr2 79077073 79077369 -171610485 - AluSq SINE Alu -16 297 3 624 286 122 12 chr2 79077524 79077779 -171610075 - L2 LINE L2 -1131 2183 1901 29 0 0 0 chr2 79079469 79079498 -171608356 + AT_rich Low_complexity Low_complexity 1 29 0 218 331 74 34 chr2 79079515 79079690 -171608164 - MIR SINE MIR 0 262 81 1645 148 97 6 chr2 79081209 79081520 -171606334 - MER44D DNA MER2_type 0 609 1 26 0 0 0 chr2 79082029 79082055 -171605799 + AT_rich Low_complexity Low_complexity 1 26 0 225 0 0 0 chr2 79082282 79082307 -171605547 + (TA)n Simple_repeat Simple_repeat 2 26 0 2051 130 20 3 chr2 79082505 79082804 -171605050 + AluSx SINE Alu 1 304 -8 2017 134 0 28 chr2 79083292 79083613 -171604241 + AluSx SINE Alu 1 312 0 431 282 46 37 chr2 79084026 79084242 -171603612 + L1MC4a LINE L1 5548 5765 -356 25 31 0 0 chr2 79084564 79084596 -171603258 + AT_rich Low_complexity Low_complexity 1 32 0 243 247 70 51 chr2 79084921 79085079 -171602775 + L1MC4a LINE L1 5874 6034 -1774 25 0 0 0 chr2 79085168 79085193 -171602661 + AT_rich Low_complexity Low_complexity 1 25 0 950 211 87 19 chr2 79085281 79085489 -171602365 + MER58A DNA MER1_type 3 224 0 691 163 89 0 chr2 79085692 79085827 -171602027 - Tigger7 DNA MER2_type -2 2485 2339 * 2005 191 0 6 chr2 79085822 79086168 -171601686 - Tigger7 DNA MER2_type -2143 344 1 214 259 37 0 chr2 79086524 79086578 -171601276 + MIR3 SINE MIR 152 207 -1 2280 97 0 3 chr2 79086922 79087221 -171600633 - AluY SINE Alu -13 298 1 968 246 216 21 chr2 79087760 79088182 -171599672 + MLT1D LTR MaLR 2 505 0 261 268 56 80 chr2 79088332 79088709 -171599145 + L1ME LINE L1 5536 5903 -218 2365 173 96 28 chr2 79088716 79088865 -171598989 + MER119 DNA MER1_type 3 140 -443 2010 156 3 3 chr2 79088865 79089167 -171598687 + AluSx SINE Alu 1 302 -10 2365 173 96 28 chr2 79089167 79089561 -171598293 + MER119 DNA MER1_type 140 583 0 210 71 0 0 chr2 79089698 79089726 -171598128 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 1687 175 4 4 chr2 79089732 79090012 -171597842 - AluJo SINE Alu -32 280 1 1571 154 15 11 chr2 79090032 79090292 -171597562 - AluJb SINE Alu -11 301 41 1041 234 174 47 chr2 79090856 79091304 -171596550 + MLT1D LTR MaLR 1 505 0 531 320 146 0 chr2 79091481 79091700 -171596154 - MIR SINE MIR -6 256 6 323 333 142 16 chr2 79093476 79093722 -171594132 + L3 LINE CR1 118 394 -1183 532 285 82 6 chr2 79093819 79093977 -171593877 - MER5B DNA MER1_type -1 177 8 204 342 69 40 chr2 79093982 79094184 -171593670 + L3 LINE CR1 831 1038 -539 183 394 40 10 chr2 79094169 79094268 -171593586 + L2 LINE L2 3169 3270 -2 * 261 250 174 8 chr2 79094453 79094585 -171593269 - L3 LINE CR1 -274 1303 1150 294 228 78 98 chr2 79094600 79094793 -171593061 - MER20B DNA MER1_type -594 189 1 1767 146 64 0 chr2 79094817 79095097 -171592757 - AluSx SINE Alu -9 303 6 773 204 124 11 chr2 79095124 79095310 -171592544 - MER3 DNA MER1_type -2 207 1 741 184 106 78 chr2 79095412 79095477 -171592377 + Charlie4a DNA MER1_type 257 319 -1642 2396 77 20 0 chr2 79095477 79095776 -171592078 + AluY SINE Alu 1 305 -6 741 184 106 78 chr2 79095776 79095955 -171591899 + Charlie4a DNA MER1_type 319 508 0 * 940 202 17 0 chr2 79095955 79096124 -171591730 - MER58A DNA MER1_type -23 201 30 199 319 72 0 chr2 79096134 79096203 -171591651 + L2 LINE L2 2684 2757 -557 431 214 61 31 chr2 79096405 79096503 -171591351 + MIR SINE MIR 2 102 -160 281 270 204 47 chr2 79097124 79097335 -171590519 - MIR SINE MIR -16 246 3 186 328 0 0 chr2 79097448 79097509 -171590345 + MIR SINE MIR 131 191 -71 4571 204 124 20 chr2 79097787 79098637 -171589217 + Charlie1a DNA MER1_type 1 1038 -1723 2400 94 3 0 chr2 79098637 79098944 -171588910 - AluSg SINE Alu -2 308 1 4571 204 124 20 chr2 79098944 79099410 -171588444 + Charlie1a DNA MER1_type 1038 1454 -1 1962 136 68 27 chr2 79099547 79099960 -171587894 + L1MA8 LINE L1 5851 6280 -11 316 288 121 86 chr2 79100661 79101147 -171586707 + L1M2 LINE L1 449 951 -5898 534 174 0 0 chr2 79101654 79101740 -171586114 - MER63 DNA MER1_type -229 832 747 4456 118 43 74 chr2 79101750 79102687 -171585167 + pTR5 LTR ERV1 955 2021 -417 318 213 65 28 chr2 79102691 79102799 -171585055 + LTR30 LTR ERV1 544 655 -67 1292 132 5 0 chr2 79102802 79102999 -171584855 + LTR12 LTR ERV1 492 689 -25 472 272 103 0 chr2 79102999 79103135 -171584719 - MER63 DNA MER1_type -60 776 1 675 212 62 0 chr2 79103703 79103849 -171584005 - AluJb SINE Alu -24 288 134 205 254 55 18 chr2 79103962 79104017 -171583837 - L2 LINE L2 -8 3305 3249 330 278 11 0 chr2 79104079 79104169 -171583685 - MER5A DNA MER1_type -85 104 14 2344 85 3 0 chr2 79104218 79104513 -171583341 + AluSg SINE Alu 1 296 -14 443 187 0 56 chr2 79105419 79105526 -171582328 - MER53 DNA DNA -2 187 87 2356 91 3 0 chr2 79105761 79106069 -171581785 - AluSq SINE Alu -4 309 1 21 0 0 0 chr2 79106894 79106915 -171580939 + AT_rich Low_complexity Low_complexity 1 21 0 900 178 24 6 chr2 79107226 79107395 -171580459 - MER110 LTR ERV1 -6 485 314 2522 40 23 0 chr2 79107395 79107697 -171580157 - AluYb8 SINE Alu -9 309 1 2200 183 5 0 chr2 79107724 79108144 -171579710 - L1MB1 LINE L1 -1 6167 5746 1066 161 0 5 chr2 79108144 79108323 -171579531 + L1MB1 LINE L1 5551 5730 -438 1280 252 57 62 chr2 79108679 79109147 -171578707 - L1ME3A LINE L1 -9 6153 5738 2261 102 7 3 chr2 79109147 79109442 -171578412 - AluSx SINE Alu -16 296 1 1280 252 57 62 chr2 79109442 79109797 -171578057 - L1ME3A LINE L1 -424 5738 5383 322 200 0 20 chr2 79109797 79109897 -171577957 + (TA)n Simple_repeat Simple_repeat 1 98 0 515 267 52 40 chr2 79109898 79110224 -171577630 - L1ME3A LINE L1 -763 5383 5054 2007 224 61 77 chr2 79110333 79111121 -171576733 - L1MC5 LINE L1 -42 7919 7151 1208 191 119 32 chr2 79111121 79111399 -171576455 - AluJo SINE Alu 0 302 1 2007 224 61 77 chr2 79111399 79111671 -171576183 - L1MC5 LINE L1 -810 7151 6876 831 341 24 34 chr2 79111928 79112427 -171575427 + MER110-int LTR ERV1 2331 2824 -1823 805 272 5 8 chr2 79113386 79113667 -171574187 - L1P3 LINE L1 -5591 284 4 1784 118 93 0 chr2 79113724 79113994 -171573860 - AluSg SINE Alu -13 297 3 3505 111 4 0 chr2 79113996 79114512 -171573342 + L1PA10 LINE L1 5650 6167 -1 9639 40 120 10 chr2 79114695 79115941 -171571913 + SVA Other Other 1 1384 -2 2360 125 82 12 chr2 79116411 79116811 -171571043 - MSTA LTR MaLR 0 428 1 502 243 281 5 chr2 79116905 79117090 -171570764 + MER90 LTR ERV1 378 613 -1 354 218 0 0 chr2 79117090 79117168 -171570686 - MER116 DNA Mariner -2 78 1 2037 172 0 0 chr2 79117244 79117604 -171570250 + MER46B DNA MER2_type 1 235 -1 1727 166 21 0 chr2 79117934 79118260 -171569594 + L1MB7 LINE L1 5852 6184 0 332 247 37 0 chr2 79118290 79118371 -171569483 - MIR SINE MIR -64 198 115 453 148 74 0 chr2 79119002 79119083 -171568771 + MER63 DNA MER1_type 1 713 -123 1839 164 95 54 chr2 79119570 79119979 -171567875 + MSTB LTR MaLR 1 426 0 491 266 74 33 chr2 79121946 79122182 -171565672 - L2 LINE L2 -276 2996 2753 473 314 63 28 chr2 79122488 79122868 -171564986 - L1MC/D LINE L1 -2158 6044 5658 2664 86 3 0 chr2 79122961 79123312 -171564542 - THE1A LTR MaLR -1 354 3 10512 92 79 0 chr2 79123314 79124778 -171563076 - THE1A-int LTR MaLR 0 1580 1 1048 107 0 0 chr2 79124779 79124929 -171562925 - THE1A LTR MaLR -1 354 205 621 85 0 0 chr2 79124926 79125008 -171562846 - THE1A LTR MaLR -273 82 1 * 373 232 90 52 chr2 79125008 79125275 -171562579 - L1MC/D LINE L1 -980 5560 5284 390 277 66 0 chr2 79125422 79125588 -171562266 - L1MC/D LINE L1 -1325 5215 5039 399 238 38 43 chr2 79125592 79125777 -171562077 - L1MC/D LINE L1 -2396 4144 3961 1130 246 90 14 chr2 79125807 79126161 -171561693 + MER21B LTR ERV1 432 812 -51 352 242 68 0 chr2 79126341 79126473 -171561381 - HAL1 LINE L1 -105 2402 2262 438 208 10 0 chr2 79126475 79126571 -171561283 - MIR SINE MIR 0 262 166 823 249 132 39 chr2 79126571 79126928 -171560926 - HAL1 LINE L1 -2117 390 1 341 219 25 76 chr2 79127013 79127132 -171560722 - L1MC/D LINE L1 -3971 2569 2457 219 250 11 11 chr2 79127372 79127464 -171560390 + (TTTA)n Simple_repeat Simple_repeat 4 95 0 205 225 36 22 chr2 79127400 79127538 -171560316 + (TTAA)n Simple_repeat Simple_repeat 4 143 0 * 562 294 41 20 chr2 79127768 79127965 -171559889 - MER63A DNA MER1_type -9 201 1 362 259 12 12 chr2 79127966 79128047 -171559807 - L2 LINE L2 -21 3292 3212 6261 239 45 15 chr2 79128048 79129362 -171558492 + L1M2c LINE L1 2 1367 -5422 1630 208 44 136 chr2 79129362 79129972 -171557882 + MLT2B3 LTR ERVL 1 554 0 6261 239 45 15 chr2 79129972 79130156 -171557698 + L1M2c LINE L1 1367 1544 -5245 227 75 25 0 chr2 79130219 79130251 -171557603 + L1MA5A LINE L1 1559 1594 -5195 2129 125 76 17 chr2 79130251 79130595 -171557259 - THE1B LTR MaLR 0 364 1 2249 87 0 0 chr2 79130595 79130904 -171556950 - THE1B-int LTR MaLR 0 1580 1272 636 130 81 49 chr2 79130904 79131027 -171556827 - THE1B LTR MaLR -105 259 133 620 49 24 0 chr2 79131027 79131109 -171556745 - THE1B-int LTR MaLR -314 1266 1183 * 12948 173 26 17 chr2 79131105 79131196 -171556658 + L1MA5A LINE L1 2965 3054 -3885 1974 130 7 0 chr2 79131196 79131517 -171556337 + AluSc SINE Alu 1 323 0 12948 173 26 17 chr2 79131517 79135360 -171552494 + L1MA5A LINE L1 3054 6934 -5 928 283 44 82 chr2 79135360 79135952 -171551902 - L2 LINE L2 -77 3236 2660 2185 120 3 7 chr2 79135953 79136262 -171551592 + AluSx SINE Alu 5 312 0 668 298 105 35 chr2 79136274 79136704 -171551150 + MLT1H1 LTR MaLR 89 548 -7 478 313 28 0 chr2 79136707 79136851 -171551003 - L2 LINE L2 -1078 2236 2089 1849 157 0 26 chr2 79136979 79137291 -171550563 - AluSx SINE Alu -8 304 1 260 287 61 55 chr2 79137319 79137483 -171550371 - HAL1 LINE L1 -1045 1462 1298 401 279 43 43 chr2 79137689 79137850 -171550004 - L1MEd LINE L1 -5102 1017 857 298 285 66 29 chr2 79139021 79139158 -171548696 + L1ME LINE L1 5615 5756 -365 211 175 18 18 chr2 79140381 79140438 -171547416 + (TA)n Simple_repeat Simple_repeat 2 58 0 1221 268 19 3 chr2 79140446 79140771 -171547083 - L1ME1 LINE L1 -5 6161 5832 1583 201 14 30 chr2 79140884 79141248 -171546606 + MLT1A2 LTR MaLR 4 361 -13 821 205 48 0 chr2 79141383 79141549 -171546305 + MER5A DNA MER1_type 1 174 -15 22 35 0 0 chr2 79141963 79141992 -171545862 + AT_rich Low_complexity Low_complexity 1 29 0 227 299 15 0 chr2 79144183 79144250 -171543604 + CT-rich Low_complexity Low_complexity 4 71 0 29 47 0 0 chr2 79144323 79144366 -171543488 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 79144445 79144466 -171543388 + AT_rich Low_complexity Low_complexity 1 21 0 209 290 14 14 chr2 79144520 79144589 -171543265 + MIR SINE MIR 62 130 -132 1554 187 27 96 chr2 79144730 79145105 -171542749 - MLT1E3 LTR MaLR -1 623 289 457 258 61 0 chr2 79145132 79145264 -171542590 - MLT1E3 LTR MaLR -514 140 1 1309 274 53 51 chr2 79145526 79146033 -171541821 + MLT1J LTR MaLR 3 510 -1 386 331 38 78 chr2 79146167 79146666 -171541188 + LTR67 LTR ERVL 5 483 -74 22 0 0 0 chr2 79146666 79146688 -171541166 + AT_rich Low_complexity Low_complexity 1 22 0 346 207 0 26 chr2 79146692 79146808 -171541046 - L1MA7 LINE L1 0 6291 6179 301 200 27 0 chr2 79146808 79146883 -171540971 + LTR67 LTR ERVL 479 555 -2 5458 194 18 16 chr2 79147996 79149129 -171538725 + L1P4 LINE L1 3968 5104 -1062 1908 65 0 4 chr2 79149129 79149358 -171538496 + AluY SINE Alu 76 303 -8 5458 194 18 16 chr2 79149358 79149932 -171537922 + L1P4 LINE L1 5104 5675 -491 387 268 89 56 chr2 79149951 79150164 -171537690 + L1ME4a LINE L1 5864 6083 -38 312 253 104 25 chr2 79150464 79150615 -171537239 - MLT1J1 LTR MaLR -3 408 248 226 95 0 24 chr2 79150889 79150931 -171536923 - MER39 LTR ERV1 -72 635 595 701 193 0 8 chr2 79150978 79151097 -171536757 - FLAM_C SINE Alu -15 118 1 6193 68 7 0 chr2 79151186 79152029 -171535825 - L1PA8 LINE L1 -7 6165 5317 308 327 99 20 chr2 79153043 79153245 -171534609 + MIR SINE MIR 13 230 -32 238 315 67 22 chr2 79155220 79155309 -171532545 + L2 LINE L2 3179 3271 -1 1025 247 218 5 chr2 79155764 79156145 -171531709 - LTR16B LTR ERVL -2 462 1 695 234 63 68 chr2 79156147 79156369 -171531485 - MIR SINE MIR -41 221 1 284 258 93 0 chr2 79156449 79156546 -171531308 - MER103 DNA DNA -58 108 3 250 349 93 51 chr2 79156725 79156940 -171530914 + MIR SINE MIR 22 245 -17 201 232 10 71 chr2 79157666 79157765 -171530089 + CT-rich Low_complexity Low_complexity 2 94 0 228 277 32 43 chr2 79158172 79158266 -171529588 + L2 LINE L2 2991 3083 -189 923 215 53 5 chr2 79158453 79158504 -171529350 + MER89 LTR ERV1 1 48 -511 243 103 0 0 chr2 79158504 79158543 -171529311 + (CAACC)n Simple_repeat Simple_repeat 2 40 0 923 215 53 5 chr2 79158543 79158884 -171528970 + MER89 LTR ERV1 48 559 0 591 211 78 1 chr2 79158886 79159024 -171528830 - MER5A DNA MER1_type -23 166 9 752 207 170 11 chr2 79159226 79159414 -171528440 + MER20 DNA MER1_type 2 219 0 416 147 27 0 chr2 79159760 79159835 -171528019 - LTR68 LTR ERV1 -663 77 1 1088 225 96 66 chr2 79159973 79160425 -171527429 + MER110A LTR ERV1 36 483 0 1879 180 18 12 chr2 79160788 79161127 -171526727 - MER67C LTR ERV1 -44 666 326 2008 147 0 28 chr2 79161169 79161488 -171526366 + AluSx SINE Alu 1 310 -2 3912 145 38 18 chr2 79161498 79162175 -171525679 + L1MA7 LINE L1 5599 6289 -2 1748 175 26 29 chr2 79162189 79162532 -171525322 - MER67C LTR ERV1 -368 342 1 1710 216 61 15 chr2 79162593 79163000 -171524854 + LTR37A LTR ERV1 1 426 0 1119 272 91 46 chr2 79163196 79163715 -171524139 - MER34 LTR ERV1 0 542 1 244 363 9 9 chr2 79164236 79164349 -171523505 + MIR SINE MIR 53 165 -97 437 353 16 5 chr2 79164480 79164670 -171523184 + L2 LINE L2 3121 3312 -1 251 389 74 20 chr2 79165695 79165844 -171522010 - MIR3 SINE MIR -19 189 33 468 361 85 27 chr2 79167402 79167875 -171519979 + L2 LINE L2 2551 3043 -229 720 280 182 51 chr2 79167879 79168087 -171519767 + MLT1J2 LTR MaLR 2 181 -269 6519 113 9 3 chr2 79168087 79169526 -171518328 + L1PA11 LINE L1 4709 6174 0 720 280 182 51 chr2 79169526 79169764 -171518090 + MLT1J2 LTR MaLR 181 440 -10 271 304 214 9 chr2 79169932 79170044 -171517810 + L2 LINE L2 3137 3271 -1 1591 186 61 66 chr2 79170468 79170860 -171516994 - MLT1B LTR MaLR 0 390 1 23 0 0 0 chr2 79171005 79171028 -171516826 + AT_rich Low_complexity Low_complexity 1 23 0 2968 83 11 8 chr2 79172453 79172825 -171515029 - THE1C LTR MaLR -2 373 1 222 37 0 0 chr2 79172918 79172945 -171514909 + (TA)n Simple_repeat Simple_repeat 1 27 0 2345 83 0 0 chr2 79172945 79173235 -171514619 - AluY SINE Alu -21 290 1 3413 70 2 0 chr2 79174398 79174825 -171513029 - LTR8 LTR ERV1 -104 587 160 318 159 29 43 chr2 79175198 79175267 -171512587 - MER116 DNA Mariner 0 80 13 27 49 0 0 chr2 79175544 79175585 -171512269 + AT_rich Low_complexity Low_complexity 1 41 0 623 68 0 0 chr2 79175659 79175733 -171512121 + AluSc SINE Alu 158 231 -78 22228 158 23 10 chr2 79176276 79181611 -171506243 - L1MA3 LINE L1 0 7724 2266 2371 89 7 3 chr2 79181611 79181915 -171505939 - AluSc SINE Alu -4 305 1 22228 158 23 10 chr2 79181915 79184197 -171503657 - L1MA3 LINE L1 -5458 2266 13 23 54 0 0 chr2 79184199 79184236 -171503618 + AT_rich Low_complexity Low_complexity 1 37 0 2028 141 44 69 chr2 79184256 79184462 -171503392 - MLT1A1 LTR MaLR -11 354 159 1421 146 73 15 chr2 79184462 79184736 -171503118 - L1MA5 LINE L1 -2 6298 6009 2028 141 44 69 chr2 79184736 79184892 -171502962 - MLT1A1 LTR MaLR -206 159 1 466 287 89 86 chr2 79185090 79185662 -171502192 - L1ME1 LINE L1 -224 5942 5369 606 254 65 93 chr2 79185971 79186388 -171501466 - L1ME1 LINE L1 -1161 4985 4581 2890 10 0 0 chr2 79186388 79186699 -171501155 + AluY SINE Alu 1 311 0 275 198 302 24 chr2 79186810 79186936 -171500918 + MIR SINE MIR 100 260 -2 311 284 25 84 chr2 79187061 79187300 -171500554 + L1MEd LINE L1 895 1119 -5000 503 293 107 43 chr2 79187305 79187811 -171500043 + HAL1 LINE L1 1231 1768 -739 2418 211 39 37 chr2 79188904 79189445 -171498409 + MLT1F LTR MaLR 1 542 0 402 326 44 23 chr2 79189695 79189909 -171497945 + MIR SINE MIR 34 247 -15 1004 267 118 47 chr2 79189981 79190497 -171497357 - MLT1H1 LTR MaLR 0 555 3 461 270 149 6 chr2 79190918 79191092 -171496762 - MIR SINE MIR -18 244 46 439 326 112 35 chr2 79192916 79193393 -171494461 - L2 LINE L2 -18 3254 2736 308 321 123 19 chr2 79193427 79193751 -171494103 - L2 LINE L2 -1223 2091 1734 47 0 0 17 chr2 79193751 79193793 -171494061 + AT_rich Low_complexity Low_complexity 1 43 -14 4540 111 25 29 chr2 79193793 79194475 -171493379 + L1PB2 LINE L1 5470 6148 -3 47 0 0 17 chr2 79194475 79194490 -171493364 + AT_rich Low_complexity Low_complexity 43 57 0 210 176 84 35 chr2 79194527 79194669 -171493185 + (TTAA)n Simple_repeat Simple_repeat 4 152 0 25 51 0 0 chr2 79195757 79195796 -171492058 + AT_rich Low_complexity Low_complexity 1 39 0 303 122 0 0 chr2 79196930 79196979 -171490875 + (GA)n Simple_repeat Simple_repeat 1 49 0 490 256 88 44 chr2 79197609 79197769 -171490085 - MER5B DNA MER1_type -1 177 11 237 163 0 0 chr2 79198032 79198075 -171489779 + MIR SINE MIR 114 156 -106 182 266 191 21 chr2 79199117 79199211 -171488643 - MIR SINE MIR -63 145 36 228 346 39 15 chr2 79199307 79199437 -171488417 + MIR SINE MIR 116 248 -14 207 276 103 69 chr2 79199727 79199872 -171487982 + MIR SINE MIR 105 254 -8 238 306 0 0 chr2 79200046 79200108 -171487746 - L2 LINE L2 0 3272 3211 341 218 59 0 chr2 79200298 79200399 -171487455 - MIR SINE MIR -64 144 38 514 258 42 42 chr2 79200555 79200722 -171487132 + MER5B DNA MER1_type 1 167 -11 462 250 135 16 chr2 79200784 79200944 -171486910 - MER5A DNA MER1_type 0 189 4 272 259 207 37 chr2 79203018 79203153 -171484701 - MIR SINE MIR -64 198 41 315 248 248 0 chr2 79203474 79203591 -171484263 + MIR SINE MIR 2 147 -115 972 170 25 106 chr2 79203606 79203841 -171484013 + MER20 DNA MER1_type 2 217 -2 298 238 12 50 chr2 79204040 79204120 -171483734 + MER5A DNA MER1_type 113 189 0 21 0 0 0 chr2 79204428 79204449 -171483405 + AT_rich Low_complexity Low_complexity 1 21 0 304 309 37 0 chr2 79204538 79204619 -171483235 + MIR SINE MIR 27 110 -152 709 286 23 42 chr2 79204705 79204964 -171482890 - MIR SINE MIR 0 262 9 286 214 0 0 chr2 79204960 79205016 -171482838 + MIR SINE MIR 196 251 -11 * 1742 120 191 7 chr2 79206004 79206287 -171481567 + MER1B DNA MER1_type 3 337 0 379 296 102 84 chr2 79206824 79207195 -171480659 - L2 LINE L2 -46 3226 2849 356 167 0 13 chr2 79207564 79207642 -171480212 + GA-rich Low_complexity Low_complexity 2 78 0 255 170 0 0 chr2 79207903 79207950 -171479904 + L2 LINE L2 3226 3272 0 260 234 13 13 chr2 79208205 79208282 -171479572 - MIR SINE MIR -33 229 153 415 200 100 9 chr2 79209366 79209476 -171478378 - L2 LINE L2 -16 3256 3137 276 322 68 17 chr2 79209509 79209627 -171478227 + L2 LINE L2 3138 3261 -11 373 355 48 0 chr2 79209926 79210092 -171477762 - L2 LINE L2 -527 2787 2614 182 264 136 36 chr2 79210101 79210211 -171477643 + MIR SINE MIR 20 140 -68 678 333 33 25 chr2 79210358 79210721 -171477133 - L2 LINE L2 -694 2620 2255 1687 159 13 36 chr2 79210744 79211045 -171476809 - AluJo SINE Alu -18 294 1 835 206 93 14 chr2 79211130 79211350 -171476504 - MIR SINE MIR -1 261 26 322 299 146 24 chr2 79211371 79211782 -171476072 - L2 LINE L2 -1178 2136 1676 2037 114 7 4 chr2 79211783 79212102 -171475752 - AluSg SINE Alu 0 320 1 234 0 0 0 chr2 79213934 79213960 -171473894 + (TA)n Simple_repeat Simple_repeat 2 27 0 268 314 86 0 chr2 79213982 79214087 -171473767 - L2 LINE L2 -5 3267 3154 210 344 89 45 chr2 79214283 79214440 -171473414 - L2 LINE L2 -163 3109 2946 1646 211 0 7 chr2 79214509 79214817 -171473037 + AluSx SINE Alu 1 306 -6 1173 219 18 18 chr2 79214902 79215126 -171472728 - MER58A DNA MER1_type 0 224 1 285 316 126 58 chr2 79215441 79215631 -171472223 - MIR SINE MIR -36 226 24 1780 226 52 22 chr2 79215831 79216277 -171471577 - MLT1C LTR MaLR -8 459 1 304 333 78 28 chr2 79216577 79216718 -171471136 - L2 LINE L2 0 3272 3125 190 304 76 13 chr2 79217167 79217246 -171470608 + L2 LINE L2 3189 3272 0 21 0 0 0 chr2 79218956 79218977 -171468877 + AT_rich Low_complexity Low_complexity 1 21 0 235 325 55 43 chr2 79220266 79220429 -171467425 - L2 LINE L2 -160 3112 2948 2534 115 19 25 chr2 79220652 79221018 -171466836 - THE1B LTR MaLR 0 364 1 206 193 241 36 chr2 79222663 79222746 -171465108 - MIR SINE MIR 0 262 163 618 251 133 59 chr2 79222777 79223115 -171464739 + LTR33A LTR ERVL 34 396 -127 37 23 0 0 chr2 79223172 79223216 -171464638 + AT_rich Low_complexity Low_complexity 1 44 0 329 284 11 0 chr2 79223350 79223445 -171464409 + LTR33A LTR ERVL 425 520 -3 354 301 56 28 chr2 79223449 79223592 -171464262 - MIR SINE MIR -96 166 20 239 277 119 68 chr2 79223610 79223787 -171464067 - L3 LINE CR1 -256 1321 1136 240 175 113 38 chr2 79223829 79223861 -171463993 + L1MD2 LINE L1 5849 5877 -482 3228 169 13 2 chr2 79223861 79224410 -171463444 - L1MD1 LINE L1 -1 6241 5687 240 175 113 38 chr2 79224410 79224457 -171463397 + L1MD2 LINE L1 5877 5934 -425 346 256 112 8 chr2 79224494 79224619 -171463235 - L1MDa LINE L1 -1733 4807 4670 2109 133 0 19 chr2 79224621 79224936 -171462918 - AluSx SINE Alu -3 309 1 2197 178 71 0 chr2 79224957 79225339 -171462515 - MSTB LTR MaLR 0 426 18 3400 243 33 40 chr2 79225359 79226423 -171461431 - L1MDa LINE L1 -1885 4655 3600 337 165 58 83 chr2 79226425 79226546 -171461308 - L1MDa LINE L1 -3763 2777 2660 1594 146 16 0 chr2 79226589 79226843 -171461011 - AluJb SINE Alu -9 303 46 5561 107 35 29 chr2 79226992 79227894 -171459960 - L1MA4A LINE L1 -3 6300 5260 1821 210 27 0 chr2 79227894 79228303 -171459551 + L1P LINE L1 4852 5271 -875 * 5053 173 57 62 chr2 79228283 79228690 -171459164 - L1MDa LINE L1 -3928 2612 2205 1555 161 3 84 chr2 79228690 79228870 -171458984 - AluJo SINE Alu -15 297 152 2118 36 0 8 chr2 79228870 79229148 -171458706 + AluY SINE Alu 39 314 0 1555 161 3 84 chr2 79229148 79229289 -171458565 - AluJo SINE Alu -160 152 1 5053 173 57 62 chr2 79229289 79229767 -171458087 - L1MDa LINE L1 -4335 2205 1732 1983 161 0 19 chr2 79229767 79230083 -171457771 - AluJb SINE Alu -2 310 1 5053 173 57 62 chr2 79230083 79230488 -171457366 - L1MDa LINE L1 -4808 1732 1327 4795 102 14 45 chr2 79230700 79230755 -171457099 - L1PB1 LINE L1 -1 6150 6095 2568 64 0 3 chr2 79230755 79231066 -171456788 - AluY SINE Alu -1 310 1 4795 102 14 45 chr2 79231066 79231738 -171456116 - L1PB1 LINE L1 -56 6095 5446 9403 211 5 6 chr2 79231742 79233736 -171454118 - L1 LINE L1 -1709 4437 2447 180 77 0 0 chr2 79233736 79233762 -171454092 + (TTAGGG)n Simple_repeat Simple_repeat 5 30 0 9092 119 31 11 chr2 79233766 79235165 -171452689 - L1PBa LINE L1 -5378 1485 59 1935 225 94 50 chr2 79235170 79235951 -171451903 - L1MDa LINE L1 -5201 1339 234 214 400 19 6 chr2 79235955 79236115 -171451739 + L2 LINE L2 2573 2734 -580 822 264 102 4 chr2 79236318 79236553 -171451301 + MIR SINE MIR 3 260 -2 319 242 17 0 chr2 79237780 79237900 -171449954 + (TA)n Simple_repeat Simple_repeat 2 123 0 309 169 0 0 chr2 79237999 79238058 -171449796 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 2424 89 37 14 chr2 79238728 79239076 -171448778 - THE1C LTR MaLR -19 356 1 379 288 59 25 chr2 79239126 79239244 -171448610 - L2 LINE L2 -2 3270 3149 284 358 0 0 chr2 79239266 79239386 -171448468 - L2 LINE L2 -2493 821 702 4587 170 46 22 chr2 79241088 79242640 -171445214 - L1MB3 LINE L1 -1 6182 4599 253 361 8 30 chr2 79242672 79242805 -171445049 - L2 LINE L2 -273 2999 2870 279 315 97 74 chr2 79242928 79243144 -171444710 - L2 LINE L2 -556 2758 2538 197 32 0 32 chr2 79245579 79245610 -171442244 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 972 279 56 43 chr2 79247760 79248226 -171439628 + L1ME LINE L1 5265 5736 -385 200 274 0 0 chr2 79248310 79248372 -171439482 + (TATATG)n Simple_repeat Simple_repeat 4 65 0 26 30 0 0 chr2 79248438 79248471 -171439383 + AT_rich Low_complexity Low_complexity 1 33 0 318 320 136 46 chr2 79248504 79248982 -171438872 + L2 LINE L2 2260 2780 -534 349 244 69 35 chr2 79249001 79249183 -171438671 - MLT1L LTR MaLR -6 609 391 1319 161 9 4 chr2 79249183 79249413 -171438441 - L1MA9 LINE L1 -444 5868 5638 * 1552 218 45 8 chr2 79249411 79249788 -171438066 + L1MA9 LINE L1 5884 6274 -38 384 194 0 0 chr2 79249918 79249998 -171437856 - MLT1J2 LTR MaLR -315 135 72 283 286 13 13 chr2 79249939 79250016 -171437838 - LTR67 LTR ERVL -384 173 97 * 995 205 78 10 chr2 79250029 79250234 -171437620 + MER20 DNA MER1_type 1 219 0 265 167 0 0 chr2 79250870 79250918 -171436936 + L1MA3 LINE L1 6258 6305 0 600 280 56 23 chr2 79250993 79251207 -171436647 + L2 LINE L2 3089 3309 -4 1443 266 117 24 chr2 79251299 79251864 -171435990 - L1MC4a LINE L1 -757 5389 5352 1151 222 28 0 chr2 79251864 79252080 -171435774 - MER58A DNA MER1_type 0 224 3 1443 266 117 24 chr2 79252080 79252294 -171435560 - L1MC4a LINE L1 -794 5352 5159 226 324 181 9 chr2 79252519 79252624 -171435230 + L2 LINE L2 3146 3268 -4 26 30 0 0 chr2 79252637 79252670 -171435184 + AT_rich Low_complexity Low_complexity 1 33 0 495 184 0 19 chr2 79252670 79252773 -171435081 - L1ME3A LINE L1 -2 6168 6068 8785 52 37 4 chr2 79254043 79255080 -171432774 - MER11C LTR ERVK 0 1071 1 553 281 37 96 chr2 79256526 79257099 -171430755 + L1ME4a LINE L1 5501 6039 -82 1891 106 16 12 chr2 79257122 79257378 -171430476 - AluSg SINE Alu -18 292 36 225 278 0 0 chr2 79257405 79257459 -171430395 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 2825 53 24 0 chr2 79257969 79258307 -171429547 - L1PA8 LINE L1 -2 6170 5825 2119 108 0 4 chr2 79258506 79258813 -171429041 - AluSg SINE Alu 0 307 2 21 0 0 0 chr2 79258910 79258931 -171428923 + AT_rich Low_complexity Low_complexity 1 21 0 527 182 17 9 chr2 79258946 79259063 -171428791 - L1MA4A LINE L1 -1 6269 6044 * 1133 170 13 13 chr2 79259047 79259271 -171428583 - L1MA4A LINE L1 -181 6122 5899 261 292 0 0 chr2 79260303 79260368 -171427486 + CT-rich Low_complexity Low_complexity 1 65 0 246 62 0 0 chr2 79262197 79262229 -171425625 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 1806 206 35 35 chr2 79262340 79262768 -171425086 - Charlie2 DNA MER1_type -576 2286 1859 672 259 61 49 chr2 79262787 79263050 -171424804 - Charlie2 DNA MER1_type -2544 318 53 190 250 77 0 chr2 79263671 79263723 -171424131 - MIR SINE MIR -142 120 65 248 65 0 0 chr2 79263723 79263754 -171424100 + Charlie2 DNA MER1_type 195 225 -2557 240 273 0 0 chr2 79264361 79264416 -171423438 - L1MC3 LINE L1 -31 7754 7700 5876 211 16 9 chr2 79264448 79265070 -171422784 - L1PA16 LINE L1 -4 6162 5546 1911 163 3 7 chr2 79265070 79265376 -171422478 - AluJb SINE Alu -7 305 1 5876 211 16 9 chr2 79265376 79266780 -171421074 - L1PA16 LINE L1 -620 5546 4120 1026 63 8 0 chr2 79267169 79267296 -171420558 - L1PB2 LINE L1 -2 6149 6022 189 272 123 0 chr2 79267296 79267377 -171420477 + L3 LINE CR1 716 806 -771 216 339 15 0 chr2 79267531 79267596 -171420258 - L3 LINE CR1 -1036 541 476 196 329 63 25 chr2 79267701 79267780 -171420074 + L2 LINE L2 3136 3217 -55 668 90 0 10 chr2 79267798 79267898 -171419956 + L1PB2 LINE L1 5947 6045 -106 1471 225 161 46 chr2 79268148 79268568 -171419286 - MLT1E LTR MaLR -12 581 88 1339 197 4 25 chr2 79268568 79268812 -171419042 + MER8 DNA MER2_type 1 239 0 1471 225 161 46 chr2 79268812 79268911 -171418943 - MLT1E LTR MaLR -505 88 2 305 209 99 0 chr2 79269083 79269174 -171418680 - L1MC4 LINE L1 0 8042 7943 26 30 0 0 chr2 79270370 79270403 -171417451 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 79270515 79270536 -171417318 + AT_rich Low_complexity Low_complexity 1 21 0 491 245 27 34 chr2 79271830 79271977 -171415877 - MLT1K LTR MaLR -65 523 378 293 333 95 25 chr2 79272621 79272864 -171414990 + L2 LINE L2 2034 2293 -1021 590 242 13 19 chr2 79272866 79273023 -171414831 + MER20 DNA MER1_type 9 164 -55 * 780 268 91 0 chr2 79273012 79273221 -171414633 + MLT1G LTR MaLR 325 552 -38 346 349 120 31 chr2 79273406 79273467 -171414387 + L2 LINE L2 2347 2401 -913 2156 154 126 5 chr2 79273467 79273849 -171414005 + MSTA LTR MaLR 1 428 0 346 349 120 31 chr2 79273849 79274269 -171413585 + L2 LINE L2 2401 2871 -443 540 307 145 21 chr2 79274327 79274610 -171413244 + L2 LINE L2 2946 3263 -9 1101 236 108 48 chr2 79274611 79274962 -171412892 + MLT1J2 LTR MaLR 1 372 -78 1000 150 95 11 chr2 79275635 79275809 -171412045 - THE1C LTR MaLR 0 375 208 1638 149 8 0 chr2 79275811 79276073 -171411781 - THE1C-int LTR MaLR -1316 264 1 1994 138 50 73 chr2 79276073 79276457 -171411397 - THE1C LTR MaLR 0 375 1 21 36 0 0 chr2 79276495 79276523 -171411331 + AT_rich Low_complexity Low_complexity 1 28 0 276 307 88 28 chr2 79276645 79276860 -171410994 + L2 LINE L2 3044 3271 -1 1427 170 69 24 chr2 79277458 79277747 -171410107 + AluJo SINE Alu 11 312 0 580 247 15 14 chr2 79278493 79278705 -171409149 + MER58 DNA MER1_type 1 2419 -1 2180 204 94 15 chr2 79278778 79279244 -171408610 + MLT1D LTR MaLR 1 503 -2 282 304 174 0 chr2 79280601 79280716 -171407138 + L2 LINE L2 3137 3271 -1 254 308 30 38 chr2 79282011 79282144 -171405710 - L2 LINE L2 -744 2570 2439 2195 87 0 4 chr2 79282186 79282461 -171405393 + AluSq SINE Alu 1 274 -39 585 245 94 97 chr2 79282756 79282937 -171404917 + MLT1K LTR MaLR 203 383 -205 420 20 0 0 chr2 79282937 79282986 -171404868 + (CA)n Simple_repeat Simple_repeat 1 49 0 585 245 94 97 chr2 79282986 79283175 -171404679 + MLT1K LTR MaLR 383 572 -16 289 315 20 27 chr2 79283239 79283388 -171404466 - L2 LINE L2 -1028 2286 2139 209 214 179 0 chr2 79283462 79283518 -171404336 - L2 LINE L2 -1357 1957 1892 21 0 0 0 chr2 79283590 79283611 -171404243 + AT_rich Low_complexity Low_complexity 1 21 0 2274 133 36 30 chr2 79284025 79284387 -171403467 + THE1B LTR MaLR 1 364 0 371 227 107 47 chr2 79284505 79284655 -171403199 + MER117 DNA MER1_type 4 162 -35 620 219 304 16 chr2 79284659 79284873 -171402981 + L2 LINE L2 2996 3147 -166 2120 115 101 24 chr2 79284873 79285211 -171402643 - THE1B LTR MaLR 0 364 1 620 219 304 16 chr2 79285211 79285243 -171402611 + L2 LINE L2 3147 3313 0 1698 138 43 113 chr2 79285303 79285700 -171402154 - THE1C LTR MaLR 0 375 7 230 229 0 0 chr2 79288033 79288094 -171399760 + A-rich Low_complexity Low_complexity 1 61 0 1140 206 66 101 chr2 79288803 79289132 -171398722 + MLT1A1 LTR MaLR 1 317 -48 2166 116 0 3 chr2 79289132 79289425 -171398429 + AluSx SINE Alu 6 297 -15 1140 206 66 101 chr2 79289425 79289473 -171398381 + MLT1A1 LTR MaLR 317 365 0 401 331 76 5 chr2 79289527 79289711 -171398143 + L2 LINE L2 312 508 -2806 381 252 44 44 chr2 79290062 79290197 -171397657 + MIR SINE MIR 20 154 -108 349 247 204 0 chr2 79291643 79291736 -171396118 - MER81 DNA DNA -2 112 1 193 295 85 108 chr2 79291771 79291900 -171395954 - MER5B DNA MER1_type -50 128 3 2388 82 0 10 chr2 79292271 79292576 -171395278 + AluSc SINE Alu 1 302 -7 344 275 45 45 chr2 79293391 79293541 -171394313 - MER5B DNA MER1_type -21 168 8 516 235 9 0 chr2 79293837 79293952 -171393902 + MER94 DNA DNA 4 119 -15 1008 297 44 34 chr2 79294394 79295287 -171392567 - L1ME3A LINE L1 -260 5910 4992 488 241 71 0 chr2 79295387 79295528 -171392326 - L1ME3A LINE L1 -1331 4815 4665 807 258 102 23 chr2 79295565 79295821 -171392033 - Charlie7 DNA MER1_type -2335 277 2 422 276 39 24 chr2 79295842 79295969 -171391885 + MER5A DNA MER1_type 59 187 -2 1459 180 51 90 chr2 79296093 79296448 -171391406 + MER58B DNA MER1_type 1 341 0 558 268 149 17 chr2 79296821 79297031 -171390823 + MIR SINE MIR 10 240 -22 374 264 0 0 chr2 79299039 79299126 -171388728 - L2 LINE L2 -661 2653 2567 295 267 126 7 chr2 79299326 79299461 -171388393 - L2 LINE L2 -1002 2312 2162 1610 161 0 4 chr2 79402050 79402292 -171285562 + AluJb SINE Alu 42 282 -30 2381 84 0 3 chr2 79402358 79402656 -171285198 + AluSx SINE Alu 5 301 -11 24 0 0 0 chr2 79402767 79402791 -171285063 + AT_rich Low_complexity Low_complexity 1 24 0 664 100 22 0 chr2 79403372 79403462 -171284392 + AluSg/x SINE Alu 207 298 -14 23 33 0 0 chr2 79403697 79403727 -171284127 + AT_rich Low_complexity Low_complexity 1 30 0 27 73 0 0 chr2 79403745 79403800 -171284054 + AT_rich Low_complexity Low_complexity 1 55 0 206 32 32 0 chr2 79403803 79403834 -171284020 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1341 115 0 38 chr2 79403837 79404046 -171283808 - AluSg/x SINE Alu -30 282 82 3534 182 45 18 chr2 79404147 79404910 -171282944 + L1 LINE L1 3783 4565 -1581 2026 205 51 3 chr2 79404910 79405281 -171282573 + MSTB LTR MaLR 1 389 -37 252 157 0 20 chr2 79405281 79405332 -171282522 + L1 LINE L1 4564 4613 -1533 343 244 83 58 chr2 79405556 79405712 -171282142 + L1ME4a LINE L1 5920 6079 -42 3527 128 16 37 chr2 79406584 79406723 -171281131 - L1MA3 LINE L1 -43 6262 6122 226 0 0 56 chr2 79406723 79406759 -171281095 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2177 96 3 20 chr2 79406761 79407053 -171280801 - AluSp SINE Alu -26 287 1 3527 128 16 37 chr2 79407053 79407537 -171280317 - L1MA3 LINE L1 -184 6121 5649 1612 149 11 11 chr2 79407540 79407809 -171280045 + MER1B DNA MER1_type 3 271 -68 2400 254 101 13 chr2 79407909 79408704 -171279150 + L1MEc LINE L1 507 1371 -5025 1463 77 0 0 chr2 79408731 79408912 -171278942 + AluY SINE Alu 56 236 -75 240 196 11 65 chr2 79409169 79409261 -171278593 + (CATATA)n Simple_repeat Simple_repeat 4 90 0 254 274 78 34 chr2 79409415 79409594 -171278260 - L1M4 LINE L1 -797 5349 5163 1066 81 22 0 chr2 79409673 79409809 -171278045 - AluSq/x SINE Alu -173 139 1 4049 236 51 4 chr2 79409843 79410781 -171277073 + L1M1 LINE L1 16 997 -6568 8935 96 9 1 chr2 79410886 79412163 -171275691 + L1P LINE L1 2140 3427 -2719 2180 61 6 100 chr2 79413118 79413447 -171274407 - AluY SINE Alu -13 298 1 1002 241 23 4 chr2 79414119 79414385 -171273469 - L1MB4 LINE L1 -6 6174 5904 955 186 148 71 chr2 79414391 79414509 -171273345 + MLT1C LTR MaLR 1 109 -358 2210 81 0 65 chr2 79414509 79414830 -171273024 + AluSg SINE Alu 1 300 -10 955 186 148 71 chr2 79414830 79415077 -171272777 + MLT1C LTR MaLR 109 394 -73 9519 147 69 40 chr2 79415177 79417365 -171270489 - L1P3 LINE L1 -4152 2309 12 496 236 104 14 chr2 79417375 79417519 -171270335 + L2 LINE L2 3155 3311 -2 535 306 128 0 chr2 79418516 79418751 -171269103 - MLT1I LTR MaLR -58 351 87 304 380 36 22 chr2 79419357 79419581 -171268273 + MLT1K LTR MaLR 2 228 -360 385 344 69 0 chr2 79420062 79420222 -171267632 + MIR3 SINE MIR 33 203 -5 296 222 120 26 chr2 79420672 79420789 -171267065 - MER94 DNA DNA -6 128 1 364 257 114 29 chr2 79421439 79421579 -171266275 + MER5A DNA MER1_type 20 171 -18 6414 30 0 1 chr2 79422429 79423185 -171264669 + L1PA4 LINE L1 5401 6155 0 9135 132 16 13 chr2 79423185 79424739 -171263115 + L1P LINE L1 2365 3925 -2221 345 247 40 81 chr2 79424854 79424927 -171262927 + L1ME3A LINE L1 2663 2737 -3409 2339 73 0 13 chr2 79424927 79425240 -171262614 - AluY SINE Alu -2 309 1 345 247 40 81 chr2 79425240 79425340 -171262514 + L1ME3A LINE L1 2737 2829 -3317 * 610 243 90 8 chr2 79425337 79425604 -171262250 + L1ME3A LINE L1 4432 4720 -1426 25 31 0 0 chr2 79425868 79425900 -171261954 + AT_rich Low_complexity Low_complexity 1 32 0 1815 284 63 48 chr2 79425927 79427274 -171260580 + L1ME3A LINE L1 4781 6155 -15 343 338 102 1 chr2 79427488 79427661 -171260193 - MIR SINE MIR -64 198 10 2282 82 0 20 chr2 79428005 79428309 -171259545 - AluSg SINE Alu -11 299 2 250 280 120 24 chr2 79428429 79428554 -171259300 - L2 LINE L2 -5 3308 3172 691 344 90 34 chr2 79428799 79429474 -171258380 - L2 LINE L2 -441 2873 2161 226 350 78 0 chr2 79429895 79429998 -171257856 - MIR SINE MIR -46 216 106 1676 161 10 14 chr2 79430032 79430323 -171257531 - AluJb SINE Alu -17 295 6 253 289 33 66 chr2 79430543 79430664 -171257190 + MIR SINE MIR 114 230 -32 238 294 111 48 chr2 79430672 79430737 -171257117 - MER5A DNA MER1_type 0 189 130 2052 96 0 4 chr2 79430737 79431007 -171256847 + AluSx SINE Alu 35 303 -9 238 294 111 48 chr2 79431007 79431067 -171256787 - MER5A DNA MER1_type -59 130 56 291 338 36 22 chr2 79431120 79431259 -171256595 + MIR SINE MIR 2 142 -120 185 157 176 20 chr2 79432028 79432079 -171255775 + MER5A DNA MER1_type 9 67 -122 986 267 5 0 chr2 79434642 79434852 -171253002 - MER58A DNA MER1_type -13 211 1 326 285 49 32 chr2 79435501 79435624 -171252230 + MIR3 SINE MIR 38 162 -46 277 328 137 38 chr2 79435664 79435847 -171252007 + MIR SINE MIR 36 236 -26 227 170 21 53 chr2 79435972 79435989 -171251865 + (TAGA)n Simple_repeat Simple_repeat 1 17 -74 2356 79 0 0 chr2 79435989 79436280 -171251574 + AluY SINE Alu 1 291 -20 227 170 21 53 chr2 79436280 79436356 -171251498 + (TAGA)n Simple_repeat Simple_repeat 17 91 0 180 0 0 0 chr2 79436453 79436473 -171251381 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr2 79436579 79436607 -171251247 + AT_rich Low_complexity Low_complexity 1 28 0 759 244 42 10 chr2 79436811 79437004 -171250850 - MER58A DNA MER1_type -24 200 2 324 286 94 47 chr2 79437013 79437228 -171250626 - HAL1b LINE L1 -679 1659 492 538 286 35 63 chr2 79438409 79438664 -171249190 + ERVL LTR ERVL 4413 4660 -1104 25 31 0 0 chr2 79440096 79440128 -171247726 + AT_rich Low_complexity Low_complexity 1 32 0 270 353 110 5 chr2 79440426 79440644 -171247210 - MIR SINE MIR -12 250 10 286 340 119 32 chr2 79440663 79440916 -171246938 - L2 LINE L2 -466 2848 2574 23 33 0 0 chr2 79442029 79442059 -171245795 + AT_rich Low_complexity Low_complexity 1 30 0 2179 228 39 22 chr2 79442643 79443231 -171244623 - L1MB8 LINE L1 -16 6162 5565 3300 189 27 32 chr2 79443419 79444401 -171243453 - L1MB8 LINE L1 -618 5566 4593 870 339 86 24 chr2 79444861 79445572 -171242282 + L2 LINE L2 1461 2215 -1099 395 310 48 14 chr2 79445652 79445797 -171242057 + MIR SINE MIR 47 196 -66 1724 199 0 3 chr2 79445849 79446150 -171241704 + AluJb SINE Alu 1 300 -12 212 172 35 17 chr2 79446155 79446213 -171241641 + (TTA)n Simple_repeat Simple_repeat 2 60 0 294 314 88 25 chr2 79446548 79446707 -171241147 - L1ME LINE L1 -467 5654 5486 22 0 0 0 chr2 79447223 79447245 -171240609 + AT_rich Low_complexity Low_complexity 1 22 0 276 247 67 40 chr2 79448094 79448244 -171239610 + L1ME4a LINE L1 5769 5922 -199 1635 151 0 0 chr2 79448835 79449086 -171238768 + AluSx SINE Alu 31 281 -31 308 284 126 93 chr2 79449251 79449736 -171238118 + L1MEd LINE L1 1116 1616 -5018 226 180 16 33 chr2 79449741 79449802 -171238052 + L1MEd LINE L1 1514 1573 -4969 594 240 59 7 chr2 79449824 79449997 -171237857 - L1MC/D LINE L1 -613 5551 5381 601 320 29 20 chr2 79450089 79450333 -171237521 - L2 LINE L2 -1159 2155 1910 12405 119 19 58 chr2 79450478 79453431 -171234423 + L1PA7 LINE L1 2 3013 -3448 13196 97 8 0 chr2 79453437 79456083 -171231771 + L1PA7 LINE L1 3815 6469 0 316 323 18 12 chr2 79456140 79456304 -171231550 + L1ME3A LINE L1 4651 4815 -1331 21 36 0 0 chr2 79456304 79456332 -171231522 + AT_rich Low_complexity Low_complexity 1 28 0 1371 293 71 21 chr2 79456374 79456894 -171230960 + L1ME3A LINE L1 5003 5591 -579 7663 29 0 0 chr2 79456894 79458168 -171229686 + L1PA3 LINE L1 4881 6154 -1 1371 293 71 21 chr2 79458168 79458582 -171229272 + L1ME3A LINE L1 5591 5983 -187 1114 226 77 85 chr2 79458582 79459086 -171228768 + MLT1D LTR MaLR 1 500 -5 417 274 34 14 chr2 79459087 79459233 -171228621 + L1ME3A LINE L1 5988 6136 -34 25 31 0 0 chr2 79459235 79459267 -171228587 + AT_rich Low_complexity Low_complexity 1 32 0 2051 130 3 13 chr2 79460175 79460474 -171227380 + AluSq SINE Alu 3 298 -15 718 164 79 33 chr2 79460542 79460743 -171227111 + LTR24B LTR ERV1 1 191 -385 331 92 0 123 chr2 79460734 79460799 -171227055 - Alu SINE Alu -9 292 236 * 1741 181 27 6 chr2 79460803 79461139 -171226715 + LTR24B LTR ERV1 184 526 -50 207 0 0 0 chr2 79461153 79461176 -171226678 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 209 333 0 0 chr2 79461177 79461246 -171226608 - MIR SINE MIR -93 169 101 27 29 0 0 chr2 79461709 79461743 -171226111 + AT_rich Low_complexity Low_complexity 1 34 0 7907 28 0 1 chr2 79461942 79462892 -171224962 - L1PA5 LINE L1 -844 5302 4354 6928 43 0 8 chr2 79462892 79463745 -171224109 + L1PA5 LINE L1 5308 6153 -1 32 43 0 0 chr2 79464619 79464665 -171223189 + AT_rich Low_complexity Low_complexity 1 46 0 308 295 19 15 chr2 79464686 79464883 -171222971 - L1P1 LINE L1 -599 5556 5355 541 313 67 55 chr2 79464954 79465465 -171222389 - L1M4 LINE L1 -879 5267 4751 418 273 75 39 chr2 79465474 79465885 -171221969 - HAL1 LINE L1 -1230 1277 852 32 43 0 0 chr2 79466683 79466729 -171221125 + AT_rich Low_complexity Low_complexity 1 46 0 1829 194 27 0 chr2 79467896 79468231 -171219623 + MER7A DNA MER2_type 4 345 -1 22 0 0 0 chr2 79468653 79468675 -171219179 + AT_rich Low_complexity Low_complexity 1 22 0 236 270 90 22 chr2 79469340 79469429 -171218425 + MLT1E3 LTR MaLR 44 138 -516 1398 244 9 36 chr2 79469455 79469602 -171218252 + MLT1E3 LTR MaLR 200 349 -275 1964 141 38 24 chr2 79469602 79469972 -171217882 - THE1C LTR MaLR 0 375 1 1398 244 9 36 chr2 79469972 79470216 -171217638 + MLT1E3 LTR MaLR 349 624 0 394 139 83 0 chr2 79470978 79471050 -171216804 + MER103 DNA DNA 7 84 -82 5998 102 7 0 chr2 79471773 79473125 -171214729 - L1PA14 LINE L1 -1 6160 4794 370 357 63 4 chr2 79473185 79473423 -171214431 + L2 LINE L2 3053 3304 -9 348 64 0 0 chr2 79473574 79473621 -171214233 + (CA)n Simple_repeat Simple_repeat 2 48 0 517 287 77 26 chr2 79474202 79474397 -171213457 - L2 LINE L2 -632 2682 2478 387 350 73 33 chr2 79474425 79474754 -171213100 + L1 LINE L1 2417 2758 -3388 22 0 0 0 chr2 79474868 79474890 -171212964 + AT_rich Low_complexity Low_complexity 1 22 0 378 286 95 53 chr2 79476202 79476441 -171211413 - LTR33 LTR ERVL 0 521 267 2155 105 3 0 chr2 79476441 79476727 -171211127 + AluSq SINE Alu 1 287 -26 378 286 95 53 chr2 79476727 79476770 -171211084 - LTR33 LTR ERVL -254 267 227 783 269 18 0 chr2 79476830 79476997 -171210857 + MER5A DNA MER1_type 20 189 0 552 262 60 100 chr2 79477004 79477229 -171210625 - LTR33 LTR ERVL -272 249 3 2017 141 7 3 chr2 79477378 79477683 -171210171 + AluSx SINE Alu 1 306 -6 474 278 61 0 chr2 79477793 79477908 -171209946 - MIR SINE MIR -119 143 22 28 0 0 0 chr2 79478347 79478375 -171209479 + AT_rich Low_complexity Low_complexity 1 28 0 1334 223 49 31 chr2 79479683 79480222 -171207632 + MLT1E LTR MaLR 8 593 0 3715 229 87 29 chr2 79480842 79481232 -171206622 + L1MC3 LINE L1 77 443 -6121 1657 178 9 47 chr2 79481232 79481553 -171206301 + AluJo SINE Alu 3 311 -1 3715 229 87 29 chr2 79481553 79483295 -171204559 + L1MC3 LINE L1 443 2274 -4290 207 0 0 0 chr2 79484654 79484677 -171203177 + (TG)n Simple_repeat Simple_repeat 2 24 0 896 240 77 40 chr2 79485080 79485415 -171202439 + L1MC3 LINE L1 2435 2756 -3808 3182 100 32 0 chr2 79485415 79485854 -171202000 - MLT2A2 LTR ERVL 0 453 1 896 240 77 40 chr2 79485854 79486028 -171201826 + L1MC3 LINE L1 2756 2922 -3642 2267 140 5 3 chr2 79486029 79486407 -171201447 + L1P LINE L1 4595 4973 -1173 2947 235 108 22 chr2 79486411 79488279 -171199575 + L1MC3 LINE L1 4677 5821 -743 9311 197 23 29 chr2 79488336 79490915 -171196939 - L1PA16 LINE L1 -2 6164 3572 1806 151 62 42 chr2 79490915 79491272 -171196582 + THE1B LTR MaLR 1 364 0 11360 111 2 4 chr2 79491272 79492855 -171194999 + THE1B-int LTR MaLR 1 1580 0 9311 197 23 29 chr2 79492855 79492867 -171194987 - L1PA16 LINE L1 -2593 3573 3562 1564 154 111 52 chr2 79492867 79493211 -171194643 + THE1B LTR MaLR 1 364 0 9311 197 23 29 chr2 79493211 79493878 -171193976 - L1PA16 LINE L1 -2604 3562 2920 44070 40 3 1 chr2 79493879 79500016 -171187838 + L1PA3 LINE L1 2 6152 -3 27 0 0 0 chr2 79500016 79500043 -171187811 + AT_rich Low_complexity Low_complexity 1 27 0 531 246 11 16 chr2 79500329 79500512 -171187342 - L1PA16 LINE L1 -3215 2931 2750 1268 204 201 0 chr2 79500516 79500834 -171187020 + L1MC3 LINE L1 7539 7920 -283 819 139 20 7 chr2 79500840 79500991 -171186863 + L1MC3 LINE L1 8051 8203 0 2107 130 7 0 chr2 79501234 79501534 -171186320 + AluSp SINE Alu 4 305 -8 573 239 100 127 chr2 79501801 79502282 -171185572 + MLT1J LTR MaLR 3 470 -41 257 354 92 18 chr2 79503776 79504005 -171183849 + L2 LINE L2 2222 2467 -847 769 211 75 28 chr2 79504180 79504393 -171183461 - MER58A DNA MER1_type 0 224 2 578 226 56 139 chr2 79505827 79506035 -171181819 + MER110 LTR ERV1 196 369 -122 2333 189 17 19 chr2 79506035 79506496 -171181358 + MER74C LTR ERVL 1 460 0 578 226 56 139 chr2 79506496 79506610 -171181244 + MER110 LTR ERV1 369 491 0 340 295 47 8 chr2 79506951 79507080 -171180774 - MIR SINE MIR -21 241 108 185 305 246 0 chr2 79507147 79507265 -171180589 - MIR SINE MIR -14 248 102 219 103 0 0 chr2 79509326 79509365 -171178489 + (TG)n Simple_repeat Simple_repeat 2 40 0 298 275 125 8 chr2 79509587 79509707 -171178147 - MER94 DNA DNA 0 134 1 187 365 144 0 chr2 79512178 79512282 -171175572 + MIR SINE MIR 21 139 -123 367 319 24 42 chr2 79514114 79514280 -171173574 - MIR3 SINE MIR -32 176 14 21 0 0 31 chr2 79514448 79514465 -171173389 + AT_rich Low_complexity Low_complexity 1 18 -13 2097 122 3 3 chr2 79514465 79514760 -171173094 - AluSx SINE Alu -17 295 1 21 0 0 31 chr2 79514760 79514774 -171173080 + AT_rich Low_complexity Low_complexity 18 31 0 508 195 23 34 chr2 79515546 79515710 -171172144 - HAL1b LINE L1 -11 1337 1176 2874 225 40 26 chr2 79517656 79518434 -171169420 - L1 LINE L1 -3128 3018 2230 1876 208 33 12 chr2 79518438 79518920 -171168934 + L1 LINE L1 3069 3560 -2586 406 80 106 14 chr2 79518920 79519620 -171168234 + (TA)n Simple_repeat Simple_repeat 1 764 0 202 62 62 0 chr2 79519620 79519652 -171168202 + (TTATA)n Simple_repeat Simple_repeat 3 36 0 5151 115 23 17 chr2 79519752 79520670 -171167184 - L1PB1 LINE L1 -108 6043 5118 3832 224 9 2 chr2 79520654 79521546 -171166308 + L1PB1 LINE L1 4198 5095 -1051 * 24 67 0 0 chr2 79521933 79521978 -171165876 + AT_rich Low_complexity Low_complexity 1 45 0 301 335 119 21 chr2 79522111 79522305 -171165549 - L1ME LINE L1 -402 5719 5507 2645 152 73 6 chr2 79522385 79522880 -171164974 + L1MA8 LINE L1 5587 6114 -177 14198 178 22 5 chr2 79522898 79528386 -171159468 - L1PB1 LINE L1 -2 6865 1113 1195 144 5 0 chr2 79528379 79528580 -171159274 - L1PB1 LINE L1 -6661 202 1 * 871 153 35 0 chr2 79528591 79528761 -171159093 + L1MA8 LINE L1 6112 6287 -4 225 294 10 20 chr2 79528876 79528978 -171158876 - L1M LINE L1 -932 5427 5327 666 278 0 23 chr2 79529301 79529474 -171158380 - MER45A DNA AcHobo -9 169 1 246 191 12 24 chr2 79529642 79529726 -171158128 + GA-rich Low_complexity Low_complexity 4 86 0 379 276 121 45 chr2 79529987 79530252 -171157602 - L2 LINE L2 -919 2395 2111 2439 144 2 78 chr2 79530409 79530868 -171156986 - MSTC LTR MaLR -2 426 3 27 49 0 0 chr2 79530889 79530930 -171156924 + AT_rich Low_complexity Low_complexity 1 41 0 211 354 0 0 chr2 79531276 79531341 -171156513 - L2 LINE L2 -69 3244 3180 1713 226 58 17 chr2 79531487 79531898 -171155956 + MLT1D LTR MaLR 5 432 -73 975 216 101 4 chr2 79531952 79532179 -171155675 + MSTD LTR MaLR 95 343 -53 3680 244 18 59 chr2 79532205 79533257 -171154597 + MSTD-int LTR MaLR 2 1010 -725 532 236 43 26 chr2 79533291 79533516 -171154338 + MSTD LTR MaLR 114 390 -6 472 148 0 0 chr2 79533519 79533600 -171154254 + MLT1D LTR MaLR 425 505 0 246 314 146 23 chr2 79534059 79534279 -171153575 - L2 LINE L2 -453 2861 2615 2075 246 77 18 chr2 79534653 79535389 -171152465 - L1M4 LINE L1 -3158 2988 2209 1298 190 35 31 chr2 79535457 79535747 -171152107 - MSTA LTR MaLR 0 428 138 286 109 0 22 chr2 79535762 79535808 -171152046 + MER58 DNA MER1_type 2373 2417 -3 187 377 0 0 chr2 79537108 79537169 -171150685 + MER5A DNA MER1_type 66 126 -63 260 271 41 91 chr2 79537240 79537592 -171150262 + MLT1I LTR MaLR 71 432 -117 638 220 8 23 chr2 79537753 79537885 -171149969 + MER58A DNA MER1_type 5 134 0 21 36 0 0 chr2 79538180 79538208 -171149646 + AT_rich Low_complexity Low_complexity 1 28 0 1111 206 52 102 chr2 79539036 79539420 -171148434 - MLT1A1 LTR MaLR 0 365 1 540 258 57 6 chr2 79539791 79539950 -171147904 + LTR16A LTR ERVL 281 447 -3 190 261 0 0 chr2 79540037 79540083 -171147771 - MIR3 SINE MIR -3 205 160 21 36 0 0 chr2 79540121 79540149 -171147705 + AT_rich Low_complexity Low_complexity 1 28 0 2147 105 3 0 chr2 79540248 79540544 -171147310 + AluSp SINE Alu 1 297 -16 357 321 44 6 chr2 79540558 79540727 -171147127 - MIR SINE MIR -65 143 14 919 215 31 27 chr2 79541765 79542025 -171145829 + L1MC5 LINE L1 7638 7898 -63 252 286 0 0 chr2 79543110 79543166 -171144688 + polypurine Low_complexity Low_complexity 1 56 0 257 289 12 24 chr2 79545002 79545085 -171142769 - MER5A DNA MER1_type -29 160 79 1767 226 69 106 chr2 79545259 79546145 -171141709 + L1MC4 LINE L1 7190 8042 0 738 297 34 31 chr2 79546451 79546865 -171140989 + L1M4 LINE L1 2447 2861 -3285 5378 240 104 14 chr2 79547001 79548590 -171139264 + Charlie8 DNA MER1_type 354 2085 -332 305 325 84 12 chr2 79548783 79548949 -171138905 + L2 LINE L2 2182 2359 -955 180 349 47 23 chr2 79549490 79549619 -171138235 + L2 LINE L2 2952 3083 -189 273 289 39 10 chr2 79550323 79550427 -171137427 + LTR67 LTR ERVL 451 557 0 1914 142 24 18 chr2 79550810 79551148 -171136706 + L1MC1 LINE L1 5994 6333 0 1069 239 0 5 chr2 79551843 79552052 -171135802 + MER58A DNA MER1_type 1 208 -16 213 231 29 115 chr2 79552195 79552299 -171135555 - L2 LINE L2 -39 3274 3180 195 42 0 0 chr2 79553025 79553049 -171134805 + (A)n Simple_repeat Simple_repeat 1 24 0 2633 29 0 13 chr2 79553180 79553486 -171134368 - AluY SINE Alu -9 302 1 1149 214 8 8 chr2 79553890 79554152 -171133702 - L1P LINE L1 -801 5345 5084 2098 108 3 33 chr2 79554152 79554427 -171133427 + L1PB1 LINE L1 5830 6095 -56 2117 134 0 3 chr2 79554427 79554725 -171133129 + AluSp SINE Alu 1 297 -16 2098 108 3 33 chr2 79554725 79554781 -171133073 + L1PB1 LINE L1 6095 6151 0 8541 134 17 50 chr2 79554878 79556319 -171131535 - THE1B-int LTR MaLR -130 1450 -38 2727 7 0 0 chr2 79556319 79556620 -171131234 - AluYa5 SINE Alu -10 301 1 2199 79 24 0 chr2 79556623 79556914 -171130940 - AluY SINE Alu -13 298 1 8541 134 17 50 chr2 79556914 79556965 -171130889 - THE1B-int LTR MaLR -1525 55 4 1554 136 88 54 chr2 79556968 79557320 -171130534 - THE1B LTR MaLR 0 364 1 397 258 67 117 chr2 79557320 79557661 -171130193 - L2 LINE L2 -810 2504 2181 5017 201 23 19 chr2 79558353 79558559 -171129295 + L1P4 LINE L1 4192 4396 -1770 261 0 0 0 chr2 79558559 79558588 -171129266 + (TAA)n Simple_repeat Simple_repeat 1 29 0 5017 201 23 19 chr2 79558588 79559662 -171128192 + L1P4 LINE L1 4396 5475 -691 261 382 16 48 chr2 79560198 79560384 -171127470 - L2 LINE L2 -186 3086 2907 655 339 53 47 chr2 79561219 79561399 -171126455 - L2 LINE L2 0 3313 3136 2256 104 0 0 chr2 79561399 79561696 -171126158 + AluSq SINE Alu 1 297 -16 655 339 53 47 chr2 79561696 79562096 -171125758 - L2 LINE L2 -177 3136 2718 689 326 72 59 chr2 79562124 79562667 -171125187 - L2 LINE L2 -853 2461 1912 373 291 267 62 chr2 79562780 79563154 -171124700 - L2 LINE L2 -1865 1449 999 40 21 0 0 chr2 79563258 79563305 -171124549 + AT_rich Low_complexity Low_complexity 1 47 0 524 71 65 35 chr2 79563305 79563475 -171124379 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 47 0 0 0 chr2 79563475 79563522 -171124332 + AT_rich Low_complexity Low_complexity 1 47 0 327 112 45 39 chr2 79563522 79563700 -171124154 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 29 28 0 0 chr2 79563700 79563736 -171124118 + AT_rich Low_complexity Low_complexity 1 36 0 502 91 52 32 chr2 79563736 79564045 -171123809 + (TATAA)n Simple_repeat Simple_repeat 1 315 0 3187 194 48 15 chr2 79564045 79564729 -171123125 + L1 LINE L1 3584 4290 -1856 28 0 0 0 chr2 79565069 79565097 -171122757 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr2 79565324 79565359 -171122495 + AT_rich Low_complexity Low_complexity 1 35 0 307 349 92 20 chr2 79565380 79565672 -171122182 - L1ME3A LINE L1 -233 5937 5625 500 380 120 29 chr2 79566327 79566768 -171121086 - L2 LINE L2 0 3272 2752 2359 76 3 16 chr2 79566768 79567085 -171120769 - AluSp SINE Alu 0 313 1 500 380 120 29 chr2 79567085 79567271 -171120583 - L2 LINE L2 -520 2752 2584 238 141 42 42 chr2 79567734 79567805 -171120049 + MER39B LTR ERV1 537 607 -46 297 75 0 0 chr2 79568145 79568185 -171119669 + (T)n Simple_repeat Simple_repeat 1 40 0 35 0 0 0 chr2 79568939 79568974 -171118880 + AT_rich Low_complexity Low_complexity 1 35 0 748 140 167 20 chr2 79569753 79569903 -171117951 + AluJo SINE Alu 122 293 -19 437 347 87 10 chr2 79570621 79570817 -171117037 - MIR SINE MIR -32 230 20 296 247 0 27 chr2 79571172 79571245 -171116609 + AluS SINE Alu 5 75 -228 1120 221 51 92 chr2 79571290 79571489 -171116365 - MLT1A2 LTR MaLR -1 373 196 282 29 0 0 chr2 79571489 79571524 -171116330 + (GA)n Simple_repeat Simple_repeat 2 36 0 1120 221 51 92 chr2 79571524 79571713 -171116141 - MLT1A2 LTR MaLR -178 196 1 2487 36 7 0 chr2 79571743 79572045 -171115809 - AluY SINE Alu -7 304 1 1193 226 70 88 chr2 79572720 79573046 -171114808 - MLT1D LTR MaLR 0 505 190 2186 95 23 7 chr2 79573046 79573351 -171114503 + AluSx SINE Alu 1 310 -2 1193 226 70 88 chr2 79573351 79573538 -171114316 - MLT1D LTR MaLR -315 190 1 21 0 0 0 chr2 79573795 79573816 -171114038 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 79573918 79573942 -171113912 + AT_rich Low_complexity Low_complexity 1 24 0 4665 166 28 63 chr2 79574365 79575544 -171112310 + L1 LINE L1 4208 5345 -801 2392 152 43 5 chr2 79576070 79576510 -171111344 + L1P5 LINE L1 5337 5793 -363 1635 191 3 79 chr2 79576753 79577131 -171110723 + MLT1B LTR MaLR 1 349 -41 2113 117 0 7 chr2 79577644 79577944 -171109910 + AluY SINE Alu 1 298 -13 186 224 149 0 chr2 79578113 79578180 -171109674 + MIR SINE MIR 176 252 -10 360 177 43 43 chr2 79578400 79578617 -171109237 + (TA)n Simple_repeat Simple_repeat 1 217 0 350 270 10 0 chr2 79578684 79578784 -171109070 - L1ME3A LINE L1 -295 5875 5775 560 151 9 0 chr2 79579040 79579146 -171108708 + L1MA9 LINE L1 6206 6312 0 180 111 0 0 chr2 79580159 79580186 -171107668 + (TG)n Simple_repeat Simple_repeat 2 28 0 577 311 56 11 chr2 79580640 79580910 -171106944 + L1ME4a LINE L1 5576 5857 -264 1138 22 0 0 chr2 79581106 79581242 -171106612 - L1PA4 LINE L1 0 6155 6020 391 323 94 18 chr2 79581242 79581367 -171106487 + MLT1J LTR MaLR 226 340 -171 1571 141 4 4 chr2 79581367 79581608 -171106246 + AluSx SINE Alu 1 241 -71 391 323 94 18 chr2 79581608 79581705 -171106149 + MLT1J LTR MaLR 340 465 -46 247 257 27 0 chr2 79581800 79581874 -171105980 + (TA)n Simple_repeat Simple_repeat 1 76 0 22 35 0 0 chr2 79581933 79581962 -171105892 + AT_rich Low_complexity Low_complexity 1 29 0 27 62 0 0 chr2 79581991 79582039 -171105815 + AT_rich Low_complexity Low_complexity 1 48 0 572 94 0 12 chr2 79582399 79582484 -171105370 + MLT1A1 LTR MaLR 282 365 0 5665 204 44 19 chr2 79582808 79583132 -171104722 + L1 LINE L1 2 316 -6012 2119 131 111 8 chr2 79583132 79583520 -171104334 - MSTA LTR MaLR 0 428 1 5665 204 44 19 chr2 79583520 79585487 -171102367 + L1 LINE L1 316 2344 -3984 4571 181 39 11 chr2 79585484 79586347 -171101507 + L1 LINE L1 3966 4860 -1468 * 386 20 20 0 chr2 79586347 79586398 -171101456 + (CA)n Simple_repeat Simple_repeat 1 52 0 4571 181 39 11 chr2 79586398 79586483 -171101371 + L1 LINE L1 4860 4941 -1387 * 6758 177 38 23 chr2 79586474 79587878 -171099976 - L1 LINE L1 -2352 5213 3760 1779 132 181 27 chr2 79587878 79588249 -171099605 - MSTA LTR MaLR 0 428 1 6758 177 38 23 chr2 79588249 79589254 -171098600 - L1 LINE L1 -3805 3760 2771 2720 108 3 3 chr2 79589254 79589633 -171098221 + LTR1 LTR ERV1 407 785 0 810 170 33 7 chr2 79589997 79590150 -171097704 + L1M1 LINE L1 22 178 -7387 230 164 110 41 chr2 79590150 79590223 -171097631 - LTR1 LTR ERV1 -707 78 1 24 0 0 0 chr2 79590261 79590285 -171097569 + AT_rich Low_complexity Low_complexity 1 24 0 29 0 0 0 chr2 79590543 79590572 -171097282 + AT_rich Low_complexity Low_complexity 1 29 0 428 246 181 9 chr2 79591851 79592113 -171095741 + Charlie8 DNA MER1_type 35 1417 -1000 2325 86 3 0 chr2 79592206 79592507 -171095347 + AluSg SINE Alu 1 302 -8 1371 157 40 7 chr2 79592650 79592924 -171094930 - L1PB4 LINE L1 -7 6149 5867 228 67 0 0 chr2 79592928 79592958 -171094896 + (CA)n Simple_repeat Simple_repeat 2 31 0 6437 188 34 4 chr2 79592968 79594295 -171093559 - L1PB4 LINE L1 -394 5762 4370 405 0 0 0 chr2 79594295 79594340 -171093514 + (TG)n Simple_repeat Simple_repeat 2 46 0 6437 188 34 4 chr2 79594340 79594858 -171092996 - L1PB4 LINE L1 -1786 4370 3869 256 239 60 26 chr2 79595344 79595461 -171092393 - L1M4 LINE L1 -745 5401 5281 947 216 57 12 chr2 79595901 79596146 -171091708 + L1MB7 LINE L1 5929 6184 0 455 317 99 12 chr2 79596511 79596672 -171091182 - MER5B DNA MER1_type -3 175 1 418 259 26 17 chr2 79596791 79596907 -171090947 + MER5A DNA MER1_type 20 136 -53 1548 154 15 126 chr2 79596907 79597296 -171090558 + MER7A DNA MER2_type 2 345 -1 239 224 48 48 chr2 79597552 79597677 -171090177 - HAL1b LINE L1 -435 913 789 22 35 0 0 chr2 79598561 79598590 -171089264 + AT_rich Low_complexity Low_complexity 1 29 0 33 43 0 0 chr2 79599189 79599236 -171088618 + AT_rich Low_complexity Low_complexity 1 47 0 1744 150 57 35 chr2 79599585 79599952 -171087902 + THE1C LTR MaLR 1 375 0 26 30 0 0 chr2 79600141 79600174 -171087680 + AT_rich Low_complexity Low_complexity 1 33 0 246 287 50 10 chr2 79600174 79600275 -171087579 - L2 LINE L2 -952 2362 2258 539 277 69 20 chr2 79600302 79600504 -171087350 - L2 LINE L2 -1314 2000 1789 272 70 23 0 chr2 79601299 79601342 -171086512 + (TG)n Simple_repeat Simple_repeat 1 44 0 343 357 40 44 chr2 79602450 79602581 -171085273 - L1MC/D LINE L1 -1992 5816 5685 1584 186 28 0 chr2 79602581 79602872 -171084982 - AluSx SINE Alu -12 300 2 343 357 40 44 chr2 79602872 79602992 -171084862 - L1MC/D LINE L1 -2123 5685 5566 6210 169 62 15 chr2 79603227 79605120 -171082734 + L1MA6 LINE L1 3958 5973 -327 2102 103 3 32 chr2 79605120 79605431 -171082423 + AluSg SINE Alu 1 302 -8 6210 169 62 15 chr2 79605431 79605766 -171082088 + L1MA6 LINE L1 5973 6291 -9 1192 263 158 27 chr2 79606023 79606472 -171081382 - L2 LINE L2 0 3313 2806 8283 198 27 10 chr2 79606560 79609089 -171078765 - L1PA16 LINE L1 -2 6164 3591 207 0 0 0 chr2 79609089 79609112 -171078742 + (TTG)n Simple_repeat Simple_repeat 2 24 0 8283 198 27 10 chr2 79609112 79609396 -171078458 - L1PA16 LINE L1 -2575 3591 3313 2860 248 58 27 chr2 79609415 79610012 -171077842 + L1 LINE L1 2258 2903 -3243 1956 139 4 0 chr2 79610012 79610336 -171077518 + AluSg SINE Alu 1 325 0 2860 248 58 27 chr2 79610336 79610748 -171077106 + L1 LINE L1 2903 3300 -2846 1841 193 53 48 chr2 79610750 79611274 -171076580 + Charlie5 DNA MER1_type 154 680 -1932 1263 211 59 11 chr2 79611272 79611628 -171076226 + Charlie5 DNA MER1_type 2252 2624 0 * 807 110 0 0 chr2 79612021 79612130 -171075724 + FLAM_C SINE Alu 14 122 -21 22 35 0 0 chr2 79612132 79612161 -171075693 + AT_rich Low_complexity Low_complexity 1 29 0 2172 105 7 0 chr2 79612624 79612920 -171074934 + AluSc SINE Alu 1 298 -11 444 319 69 82 chr2 79612964 79613587 -171074267 - HAL1 LINE L1 -916 1591 977 277 380 73 26 chr2 79614617 79614809 -171073045 - MIR3 SINE MIR -3 205 5 382 291 112 54 chr2 79615494 79615735 -171072119 + MIR SINE MIR 5 259 -3 932 293 122 41 chr2 79615871 79616347 -171071507 - L2 LINE L2 0 3313 2800 579 298 128 0 chr2 79617296 79617531 -171070323 - MLT1I LTR MaLR -58 351 87 327 384 36 22 chr2 79618137 79618361 -171069493 + MLT1K LTR MaLR 2 228 -360 394 344 69 0 chr2 79618842 79619002 -171068852 + MIR3 SINE MIR 33 203 -5 296 222 120 26 chr2 79619453 79619570 -171068284 - MER94 DNA DNA -6 128 1 356 254 92 31 chr2 79620220 79620350 -171067504 + MER5A DNA MER1_type 20 157 -32 6286 36 0 1 chr2 79621210 79621962 -171065892 + L1PA4 LINE L1 5401 6151 -4 1859 189 18 3 chr2 79622002 79622340 -171065514 - MER2 DNA MER2_type 0 344 2 23 0 0 0 chr2 79622350 79622373 -171065481 + AT_rich Low_complexity Low_complexity 1 23 0 1852 135 124 59 chr2 79622401 79622947 -171064907 + MER4A LTR ERV1 1 444 -21 21 0 0 0 chr2 79622978 79622999 -171064855 + AT_rich Low_complexity Low_complexity 1 21 0 2034 187 44 5 chr2 79624991 79625397 -171062457 + MER95 LTR ERV 10 431 0 3136 160 9 59 chr2 79625737 79626381 -171061473 - LTR9 LTR ERV1 0 612 1 324 322 0 0 chr2 79626534 79626655 -171061199 + L1ME4a LINE L1 2683 2803 -3343 323 333 48 18 chr2 79626661 79626826 -171061028 + L1ME4a LINE L1 3718 3887 -2259 723 178 58 42 chr2 79628003 79628194 -171059660 + LTR37A LTR ERV1 4 197 -229 834 167 24 24 chr2 79628294 79628504 -171059350 + LTR37A LTR ERV1 217 426 0 11084 28 0 0 chr2 79629369 79631441 -171056413 - L1PA3 LINE L1 -1 6154 4077 4145 150 31 3 chr2 79631798 79632543 -171055311 + L1MA8 LINE L1 5522 6287 -4 419 160 53 0 chr2 79632587 79632662 -171055192 + MLT1C LTR MaLR 65 143 -324 1357 207 19 7 chr2 79632942 79633213 -171054641 + MLT1C LTR MaLR 194 467 0 262 311 100 11 chr2 79634775 79634865 -171052989 - L2 LINE L2 -52 3220 3123 624 246 33 102 chr2 79634938 79635182 -171052672 - MIR SINE MIR -21 241 15 445 300 58 49 chr2 79635206 79635632 -171052222 - L2 LINE L2 -195 3077 2646 369 0 0 0 chr2 79636238 79636279 -171051575 + (CA)n Simple_repeat Simple_repeat 1 41 0 336 48 0 0 chr2 79636583 79636625 -171051229 + (CA)n Simple_repeat Simple_repeat 1 42 0 373 274 156 76 chr2 79636648 79636982 -171050872 + L1ME4a LINE L1 4680 4986 -1160 2082 132 0 0 chr2 79636982 79637270 -171050584 + AluSc SINE Alu 1 288 -21 373 274 156 76 chr2 79637270 79637336 -171050518 + L1ME4a LINE L1 4986 5045 -1101 7065 54 7 0 chr2 79637336 79638436 -171049418 + L1PA7 LINE L1 5049 6154 0 373 274 156 76 chr2 79638436 79638668 -171049186 + L1ME4a LINE L1 5045 5364 -782 277 318 70 20 chr2 79638777 79638978 -171048876 + L1ME4a LINE L1 5493 5703 -418 10402 219 28 76 chr2 79639027 79640870 -171046984 + L1M2 LINE L1 4 1551 -5297 1105 91 0 0 chr2 79640870 79641024 -171046830 - L1PA8 LINE L1 -5 6167 6014 10402 219 28 76 chr2 79641024 79643093 -171044761 + L1M2 LINE L1 1551 3719 -3129 1254 134 51 24 chr2 79643090 79643335 -171044519 + L1MA4A LINE L1 5281 5518 -785 * 2079 114 88 23 chr2 79643335 79643677 -171044177 + THE1B LTR MaLR 1 364 0 10624 118 29 1 chr2 79643677 79645214 -171042640 + THE1B-int LTR MaLR 1 1580 0 2089 138 48 28 chr2 79645214 79645570 -171042284 + THE1B LTR MaLR 1 363 -1 2004 172 59 25 chr2 79645578 79646133 -171041721 + L1MA4A LINE L1 5662 6296 -7 241 288 170 20 chr2 79646279 79646432 -171041422 + L1ME4a LINE L1 5940 6115 -6 1093 174 3 20 chr2 79646647 79646933 -171040921 + MLT1A1 LTR MaLR 1 365 0 240 297 0 33 chr2 79648160 79648251 -171039603 - MIR SINE MIR -56 206 119 1033 261 132 34 chr2 79648258 79648637 -171039217 + MLT1E LTR MaLR 178 593 0 462 326 49 20 chr2 79648637 79648948 -171038906 + L1ME LINE L1 5492 5811 -358 2279 103 7 0 chr2 79649015 79649317 -171038537 + AluSc SINE Alu 1 304 -5 28 29 0 0 chr2 79650838 79650873 -171036981 + AT_rich Low_complexity Low_complexity 1 35 0 360 152 0 0 chr2 79651695 79651761 -171036093 + (TG)n Simple_repeat Simple_repeat 1 66 0 576 186 6 33 chr2 79652459 79652642 -171035212 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 217 0 36 0 chr2 79652642 79652670 -171035184 + (TA)n Simple_repeat Simple_repeat 2 30 0 209 205 0 0 chr2 79652963 79653002 -171034852 + (TG)n Simple_repeat Simple_repeat 1 39 0 659 251 79 44 chr2 79654630 79654692 -171033162 - MLT1D LTR MaLR -3 502 444 3289 54 0 5 chr2 79654692 79655100 -171032754 - L1PA7 LINE L1 -3 6151 5746 659 251 79 44 chr2 79655100 79655240 -171032614 - MLT1D LTR MaLR -61 444 293 279 283 18 18 chr2 79655441 79655554 -171032300 + G-rich Low_complexity Low_complexity 2 114 0 9955 81 9 1 chr2 79655594 79656985 -171030869 + L1P LINE L1 2972 4374 -1772 4249 68 14 33 chr2 79657164 79657732 -171030122 - L1PA8A LINE L1 -570 5561 5018 1878 151 7 0 chr2 79657732 79658034 -171029820 - AluSc SINE Alu 0 304 1 4249 68 14 33 chr2 79658034 79658301 -171029553 - L1PA8A LINE L1 -1113 5018 4747 625 320 66 8 chr2 79658693 79659178 -171028676 - L1MEd LINE L1 -3407 2722 2210 1337 279 70 49 chr2 79659179 79659839 -171028015 + MLT1E2 LTR MaLR 1 626 0 257 282 108 63 chr2 79659896 79660871 -171026983 - L1MEd LINE L1 -4115 2195 1126 455 174 47 0 chr2 79661031 79661180 -171026674 + (TA)n Simple_repeat Simple_repeat 2 157 0 322 267 69 61 chr2 79661323 79661585 -171026269 - L1MEd LINE L1 -5281 838 575 189 339 0 0 chr2 79662164 79662229 -171025625 - MIR SINE MIR -75 133 69 237 274 0 0 chr2 79662860 79662911 -171024943 + (TG)n Simple_repeat Simple_repeat 2 52 0 219 263 13 66 chr2 79662992 79663068 -171024786 - L3b LINE CR1 -66 1517 1446 1825 186 24 6 chr2 79663089 79663428 -171024426 + MLT1A1 LTR MaLR 1 345 -20 519 333 86 31 chr2 79663691 79664015 -171023839 - MLT1I LTR MaLR -9 400 59 635 237 144 0 chr2 79664407 79664546 -171023308 - MER45A DNA AcHobo -19 159 1 4697 103 4 6 chr2 79664663 79665362 -171022492 - L1PA8A LINE L1 -3 6128 5431 711 190 33 22 chr2 79669420 79669604 -171018250 - MER53 DNA DNA 0 189 4 302 385 6 6 chr2 79669729 79669885 -171017969 - L1M4 LINE L1 -1908 4238 4083 21 0 0 0 chr2 79670966 79670987 -171016867 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr2 79671434 79671458 -171016396 + (GA)n Simple_repeat Simple_repeat 1 24 0 1378 179 151 82 chr2 79671886 79672350 -171015504 + MLT1F1 LTR MaLR 4 499 -68 626 285 87 51 chr2 79672422 79672811 -171015043 - MLT1L LTR MaLR -64 551 149 459 324 95 22 chr2 79674203 79674697 -171013157 + L1M4 LINE L1 2789 3318 -2828 333 320 89 22 chr2 79675015 79675240 -171012614 + L1M4 LINE L1 3739 3978 -2168 234 192 0 19 chr2 79676698 79676750 -171011104 + L1MC4 LINE L1 6652 6702 -1340 29 28 0 0 chr2 79676826 79676862 -171010992 + AT_rich Low_complexity Low_complexity 1 36 0 238 233 17 0 chr2 79677820 79677880 -171009974 - MLT1I LTR MaLR -23 386 326 442 341 18 18 chr2 79678384 79678601 -171009253 + L2 LINE L2 2701 2917 -397 732 202 66 22 chr2 79678601 79678829 -171009025 - LTR37B LTR ERV1 -1 467 230 1390 177 16 0 chr2 79678920 79679174 -171008680 - L1PA8 LINE L1 -8 6164 5907 192 167 0 0 chr2 79679284 79679332 -171008522 + T-rich Low_complexity Low_complexity 1 48 0 1225 152 15 10 chr2 79679332 79679536 -171008318 - MLT2B3 LTR ERVL -347 207 3 312 175 48 0 chr2 79680021 79680084 -171007770 - L1MC1 LINE L1 -234 6099 6034 1672 181 63 17 chr2 79680369 79680718 -171007136 + MLT1A1 LTR MaLR 1 365 0 212 86 29 0 chr2 79680751 79680786 -171007068 + (TG)n Simple_repeat Simple_repeat 2 37 0 259 232 53 21 chr2 79680877 79680972 -171006882 - L1ME2 LINE L1 -4 6160 6063 224 94 0 0 chr2 79680973 79681005 -171006849 + MIR SINE MIR 122 153 -109 547 214 60 121 chr2 79681005 79681376 -171006478 - L1ME2 LINE L1 -102 6068 5743 335 243 80 106 chr2 79681389 79681690 -171006164 - L1ME2 LINE L1 -518 5603 5311 231 204 0 0 chr2 79681726 79681780 -171006074 + L1MC4 LINE L1 6652 6705 -1337 363 255 0 0 chr2 79681781 79681887 -171005967 + (TA)n Simple_repeat Simple_repeat 1 106 0 963 269 4 18 chr2 79682220 79682447 -171005407 - MIR SINE MIR -32 230 7 1751 21 0 34 chr2 79683177 79683415 -171004439 + L1PA3 LINE L1 5925 6154 -1 1087 262 49 26 chr2 79683440 79683829 -171004025 + L1ME3A LINE L1 5586 5983 -187 1119 226 77 85 chr2 79683829 79684333 -171003521 + MLT1D LTR MaLR 1 500 -5 415 274 34 14 chr2 79684334 79684480 -171003374 + L1ME3A LINE L1 5988 6136 -34 25 31 0 0 chr2 79684482 79684514 -171003340 + AT_rich Low_complexity Low_complexity 1 32 0 1797 127 17 27 chr2 79685422 79685721 -171002133 + AluSq SINE Alu 3 298 -15 717 164 79 33 chr2 79685789 79685990 -171001864 + LTR24B LTR ERV1 1 191 -385 326 92 0 123 chr2 79685981 79686046 -171001808 - Alu SINE Alu -9 292 236 * 1753 181 27 6 chr2 79686050 79686386 -171001468 + LTR24B LTR ERV1 184 526 -50 207 0 0 0 chr2 79686400 79686423 -171001431 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 212 333 0 0 chr2 79686424 79686493 -171001361 - MIR SINE MIR -93 169 101 27 29 0 0 chr2 79686956 79686990 -171000864 + AT_rich Low_complexity Low_complexity 1 34 0 7897 28 0 1 chr2 79687189 79688139 -170999715 - L1PA6 LINE L1 -844 5302 4354 6302 76 2 1 chr2 79688139 79688985 -170998869 + L1PA6 LINE L1 5308 6154 0 279 328 16 8 chr2 79689042 79689170 -170998684 + L1ME LINE L1 4651 4779 -1367 28 48 0 0 chr2 79689192 79689234 -170998620 + AT_rich Low_complexity Low_complexity 1 42 0 617 291 82 12 chr2 79689276 79689800 -170998054 + L1ME LINE L1 5003 5562 -600 * 4339 21 0 1 chr2 79689796 79690605 -170997249 + L1P1 LINE L1 4881 5688 -467 14580 135 13 19 chr2 79690711 79693738 -170994116 - L1PA8A LINE L1 -139 5992 2985 1761 197 39 21 chr2 79693940 79694321 -170993533 - MLT1C LTR MaLR 0 467 80 1427 228 10 13 chr2 79694341 79694653 -170993201 + MLT1A2 LTR MaLR 63 373 -1 3447 205 24 0 chr2 79694747 79695488 -170992366 + L1MB7 LINE L1 5426 6184 0 5433 161 24 28 chr2 79695520 79696165 -170991689 - L1MA6 LINE L1 0 6300 5654 6804 114 13 21 chr2 79696165 79697245 -170990609 - MER11C LTR ERVK 0 1071 1 5433 161 24 28 chr2 79697245 79698228 -170989626 - L1MA6 LINE L1 -646 5654 4680 3120 256 52 35 chr2 79698208 79699712 -170988142 - L1M1 LINE L1 -4044 3521 2208 * 504 381 45 30 chr2 79700056 79700526 -170987328 - L1M1 LINE L1 -5804 1692 1216 768 305 60 55 chr2 79700543 79700943 -170986911 - MLT1I LTR MaLR -2 407 6 298 278 71 24 chr2 79701106 79701232 -170986622 - MLT1I LTR MaLR -259 150 19 612 286 42 32 chr2 79701244 79701461 -170986393 - MIR SINE MIR -24 238 20 201 94 0 0 chr2 79702896 79702928 -170984926 + (TA)n Simple_repeat Simple_repeat 1 32 0 584 263 63 6 chr2 79703079 79703254 -170984600 + MER5A DNA MER1_type 5 189 0 2159 115 0 0 chr2 79703259 79703554 -170984300 + AluSc SINE Alu 1 295 -14 740 316 85 20 chr2 79703791 79704295 -170983559 - HAL1 LINE L1 -1594 913 377 21 0 0 0 chr2 79704371 79704392 -170983462 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr2 79705921 79705956 -170981898 + AT_rich Low_complexity Low_complexity 1 35 0 364 157 0 12 chr2 79706870 79706953 -170980901 + L1MA7 LINE L1 6205 6286 -5 799 223 29 0 chr2 79708651 79708826 -170979028 + MER58A DNA MER1_type 45 224 0 1847 206 15 76 chr2 79708935 79709244 -170978610 - MLT1D LTR MaLR -13 492 226 2461 55 3 10 chr2 79709244 79709553 -170978301 - AluY SINE Alu -4 307 1 1847 206 15 76 chr2 79709553 79709767 -170978087 - MLT1D LTR MaLR -279 226 1 247 324 28 28 chr2 79710085 79710230 -170977624 - LTR16C LTR ERVL -13 478 334 205 348 43 26 chr2 79710747 79710862 -170976992 - MIR SINE MIR -57 205 89 1853 189 56 46 chr2 79710875 79711336 -170976518 + MER31B LTR ERV1 1 466 0 764 247 11 0 chr2 79712707 79712893 -170974961 - L1MD3 LINE L1 -58 7937 7750 386 319 132 54 chr2 79713140 79713550 -170974304 - LTR16C LTR ERVL -2 489 48 6118 125 22 4 chr2 79713552 79714730 -170973124 + L1PB1 LINE L1 4949 6150 -1 33 0 0 0 chr2 79714730 79714763 -170973091 + AT_rich Low_complexity Low_complexity 1 33 0 1833 181 60 66 chr2 79714774 79715271 -170972583 - MER67C LTR ERV1 -216 494 1 364 239 62 18 chr2 79716164 79716277 -170971577 - MIR3 SINE MIR -4 204 87 326 285 120 50 chr2 79717515 79717757 -170970097 + L1MC4a LINE L1 5668 5926 -1882 272 127 18 0 chr2 79717788 79717843 -170970011 + (TG)n Simple_repeat Simple_repeat 2 57 0 252 264 0 0 chr2 79717886 79717939 -170969915 - L2 LINE L2 -5 3308 3256 237 288 99 27 chr2 79717970 79718081 -170969773 - L2 LINE L2 -1052 2262 2144 2483 49 3 0 chr2 79719925 79720229 -170967625 - AluY SINE Alu -6 305 1 23 0 0 0 chr2 79720272 79720295 -170967559 + AT_rich Low_complexity Low_complexity 1 23 0 7687 22 0 0 chr2 79720477 79721379 -170966475 - L1PA3 LINE L1 0 6155 5254 1657 218 53 12 chr2 79721665 79722096 -170965758 + L1MB4 LINE L1 5732 6180 0 2328 107 0 0 chr2 79722160 79722469 -170965385 + AluSx SINE Alu 1 309 -3 475 175 0 0 chr2 79722984 79723081 -170964773 - AluSg/x SINE Alu -8 304 208 2722 284 92 44 chr2 79723480 79724224 -170963630 - HAL1 LINE L1 -152 2355 1648 7358 32 0 0 chr2 79724224 79725676 -170962178 - L1PA4 LINE L1 -7 6148 4698 2722 284 92 44 chr2 79725676 79726611 -170961243 - HAL1 LINE L1 -859 1648 595 897 178 83 22 chr2 79726668 79726898 -170960956 - MER63 DNA MER1_type -609 321 78 336 313 78 0 chr2 79726963 79727091 -170960763 - HAL1 LINE L1 -1960 547 410 528 281 55 21 chr2 79727161 79727399 -170960455 - HAL1 LINE L1 -2261 246 1 355 257 115 102 chr2 79727478 79727879 -170959975 - L1M4 LINE L1 -1355 4791 4386 210 158 0 0 chr2 79728054 79728092 -170959762 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 738 204 58 24 chr2 79728117 79728305 -170959549 + MER66B LTR ERV1 188 423 -131 3049 207 28 30 chr2 79728375 79728768 -170959086 + L1 LINE L1 2933 3325 -2821 1917 112 87 0 chr2 79728768 79729055 -170958799 + AluSx SINE Alu 1 312 0 3049 207 28 30 chr2 79729055 79729521 -170958333 + L1 LINE L1 3325 3790 -2356 326 143 0 0 chr2 79729521 79729570 -170958284 + Alu SINE Alu 1 49 -253 1158 265 106 66 chr2 79730178 79730855 -170956999 - L1M4 LINE L1 -1067 5079 4431 201 39 0 0 chr2 79730855 79730881 -170956973 + (TA)n Simple_repeat Simple_repeat 1 26 0 1158 265 106 66 chr2 79730881 79731681 -170956173 - L1M4 LINE L1 -1715 4431 3542 1137 162 0 96 chr2 79731753 79732024 -170955830 - L1MB8 LINE L1 -6 6172 5928 12818 223 51 31 chr2 79732030 79733664 -170954190 - L1MA6 LINE L1 -238 7481 5882 180 0 0 0 chr2 79733664 79733684 -170954170 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 12818 223 51 31 chr2 79733684 79733791 -170954063 - L1MA6 LINE L1 -1837 5882 5779 274 80 40 0 chr2 79733791 79733841 -170954013 + (TA)n Simple_repeat Simple_repeat 2 53 0 12818 223 51 31 chr2 79733841 79734147 -170953707 - L1MA6 LINE L1 -1940 5779 5481 2089 100 4 0 chr2 79734147 79734417 -170953437 + AluSg SINE Alu 22 292 -18 12818 223 51 31 chr2 79734417 79734583 -170953271 - L1MA6 LINE L1 -2238 5481 5320 2247 87 3 0 chr2 79734583 79734869 -170952985 - AluSc SINE Alu -22 287 1 12818 223 51 31 chr2 79734869 79735350 -170952504 - L1MA6 LINE L1 -2399 5320 4850 2293 113 7 0 chr2 79735350 79735660 -170952194 - AluSx SINE Alu 0 312 1 12818 223 51 31 chr2 79735660 79737077 -170950777 - L1MA6 LINE L1 -2869 4850 3464 234 0 0 0 chr2 79737077 79737103 -170950751 + (CA)n Simple_repeat Simple_repeat 2 27 0 12818 223 51 31 chr2 79737103 79737517 -170950337 - L1MA6 LINE L1 -4255 3464 3060 1969 145 10 0 chr2 79737517 79737820 -170950034 - AluSq SINE Alu -7 306 1 277 89 22 0 chr2 79737825 79737870 -170949984 + MADE1 DNA Mariner 35 80 0 12818 223 51 31 chr2 79737870 79738427 -170949427 - L1MA6 LINE L1 -4662 3057 1889 1422 326 20 25 chr2 79738459 79739011 -170948843 - L1MA6 LINE L1 -6475 1014 466 496 271 71 80 chr2 79739308 79739747 -170948107 - L1M4 LINE L1 -2991 3155 2721 24 32 0 0 chr2 79740482 79740513 -170947341 + AT_rich Low_complexity Low_complexity 1 31 0 339 250 65 0 chr2 79740878 79740970 -170946884 + MLT1I LTR MaLR 307 404 -5 1007 269 11 0 chr2 79741474 79741742 -170946112 + L1M2b LINE L1 33 303 -6906 422 150 12 0 chr2 79741744 79741824 -170946030 + L1MA5A LINE L1 6214 6294 -3 828 245 69 0 chr2 79741973 79742206 -170945648 - Charlie1 DNA MER1_type -306 2455 2207 503 231 10 0 chr2 79742203 79742307 -170945547 - Charlie1 DNA MER1_type -2621 140 36 * 11135 204 45 14 chr2 79742382 79746153 -170941701 - L1MA5 LINE L1 0 6942 3058 292 240 13 27 chr2 79746153 79746228 -170941626 - AluJ/FRAM SINE Alu -1 301 228 1711 207 65 2 chr2 79746228 79746629 -170941225 - L1MA5 LINE L1 -4987 1802 1377 2401 246 73 43 chr2 79746632 79747372 -170940482 - L1MA5 LINE L1 -6017 772 11 240 293 24 12 chr2 79747408 79747490 -170940364 + MLT1J LTR MaLR 212 294 -217 1794 148 0 40 chr2 79747618 79747915 -170939939 + AluSx SINE Alu 3 287 -25 216 97 0 0 chr2 79747915 79747946 -170939908 + (TA)n Simple_repeat Simple_repeat 2 32 0 22 56 0 0 chr2 79747965 79748001 -170939853 + AT_rich Low_complexity Low_complexity 1 36 0 374 286 41 59 chr2 79749158 79749378 -170938476 + L1MC4 LINE L1 7826 8041 -1 1406 113 170 0 chr2 79749429 79749543 -170938311 + AluSx SINE Alu 1 94 -217 384 40 0 0 chr2 79749543 79749593 -170938261 + (CA)n Simple_repeat Simple_repeat 1 50 0 1406 113 170 0 chr2 79749593 79749747 -170938107 + AluSx SINE Alu 94 311 0 24 32 0 0 chr2 79749863 79749894 -170937960 + AT_rich Low_complexity Low_complexity 1 31 0 401 368 75 0 chr2 79749925 79750099 -170937755 - MIR SINE MIR -71 191 5 489 204 11 0 chr2 79750099 79750187 -170937667 - Tigger5 DNA MER2_type 0 2323 2235 368 173 13 27 chr2 79750235 79750310 -170937544 - Tigger5 DNA MER2_type 0 2323 2250 279 200 0 18 chr2 79750277 79750332 -170937522 - Tigger5 DNA MER2_type -2268 55 2 * 1183 205 84 62 chr2 79750389 79750745 -170937109 + MER92C LTR ERV1 189 552 -2 367 47 0 0 chr2 79750863 79750906 -170936948 + MLT2B2 LTR ERVL 397 439 -76 * 1857 179 91 38 chr2 79750903 79751323 -170936531 - MLT2B1 LTR ERVL -78 442 1 4081 172 40 28 chr2 79752719 79752960 -170934894 + L1MA9 LINE L1 5405 5642 -670 1116 153 44 10 chr2 79752960 79753163 -170934691 - MER6B DNA MER2_type 0 210 1 4081 172 40 28 chr2 79753163 79753313 -170934541 + L1MA9 LINE L1 5642 5789 -523 369 0 0 0 chr2 79753313 79753354 -170934500 + (CA)n Simple_repeat Simple_repeat 2 42 0 4081 172 40 28 chr2 79753354 79753858 -170933996 + L1MA9 LINE L1 5789 6312 0 332 330 57 9 chr2 79754056 79754283 -170933571 - L1MDa LINE L1 -4658 1471 1234 400 314 71 70 chr2 79754342 79755276 -170932578 - L1MDa LINE L1 -4910 1209 275 188 263 35 18 chr2 79755775 79755832 -170932022 + MER5A DNA MER1_type 130 187 -2 27 29 0 0 chr2 79756213 79756247 -170931607 + AT_rich Low_complexity Low_complexity 1 34 0 2863 243 7 2 chr2 79756360 79756927 -170930927 - MER70B LTR ERVL -8 570 1 22 0 0 0 chr2 79757190 79757212 -170930642 + AT_rich Low_complexity Low_complexity 1 22 0 317 314 96 0 chr2 79758894 79759082 -170928772 - L1M4 LINE L1 -1441 4705 4500 203 250 0 0 chr2 79759721 79759773 -170928081 + (TG)n Simple_repeat Simple_repeat 1 52 0 21 0 0 0 chr2 79760243 79760264 -170927590 + AT_rich Low_complexity Low_complexity 1 21 0 1089 224 152 30 chr2 79761482 79762022 -170925832 + LTR50 LTR ERVL 1 793 -2 446 304 90 29 chr2 79762983 79763496 -170924358 - L1ME4a LINE L1 -76 6045 5502 221 300 50 38 chr2 79764595 79764675 -170923179 - L2 LINE L2 -1 3312 3232 911 307 178 35 chr2 79764690 79765819 -170922035 - L2 LINE L2 -185 3087 1680 2467 104 13 16 chr2 79765819 79766195 -170921659 - THE1C LTR MaLR 0 375 1 911 307 178 35 chr2 79766195 79766619 -170921235 - L2 LINE L2 -1592 1680 1318 22 35 0 0 chr2 79766688 79766717 -170921137 + AT_rich Low_complexity Low_complexity 1 29 0 1128 209 50 60 chr2 79767235 79767536 -170920318 + AluJb SINE Alu 3 300 -2 240 365 9 19 chr2 79767912 79768019 -170919835 - MIR3 SINE MIR -16 192 87 188 167 28 0 chr2 79768055 79768091 -170919763 + L2 LINE L2 3268 3304 -9 213 289 237 0 chr2 79769366 79769463 -170918391 + MER5A DNA MER1_type 7 126 -63 2577 159 14 2 chr2 79769815 79770242 -170917612 + MSTB1 LTR MaLR 1 432 0 1334 223 19 35 chr2 79770588 79770955 -170916899 - MLT1A1 LTR MaLR 0 365 5 320 347 144 7 chr2 79771299 79771570 -170916284 - MLT1L LTR MaLR 0 615 308 195 42 0 0 chr2 79771694 79771718 -170916136 + (TG)n Simple_repeat Simple_repeat 2 25 0 1179 240 79 52 chr2 79771719 79772214 -170915640 + MER74B LTR ERVL 75 582 -40 266 260 0 14 chr2 79772443 79772516 -170915338 + HsTC2 DNA Tc2 1 72 -1826 715 276 62 25 chr2 79773265 79773540 -170914314 + MLT1G LTR MaLR 292 576 -14 228 184 0 0 chr2 79776666 79776715 -170911139 + GA-rich Low_complexity Low_complexity 3 51 0 463 280 119 0 chr2 79779428 79779571 -170908283 - MIR SINE MIR -29 233 74 556 303 16 33 chr2 79781218 79781446 -170906408 + MIR SINE MIR 18 243 -19 407 229 41 57 chr2 79781689 79781811 -170906043 + MIR SINE MIR 35 154 -108 238 340 34 14 chr2 79781832 79781979 -170905875 - MIR SINE MIR -8 254 105 195 42 0 0 chr2 79784083 79784107 -170903747 + (CTAAT)n Simple_repeat Simple_repeat 1 24 0 354 367 29 0 chr2 79784897 79785036 -170902818 + MIR SINE MIR 20 162 -100 1134 262 58 45 chr2 79785041 79785487 -170902367 + LTR16A1 LTR ERVL 6 457 0 1585 222 58 22 chr2 79786293 79786739 -170901115 + MLT1C LTR MaLR 6 467 0 363 359 138 27 chr2 79786742 79787040 -170900814 + L2 LINE L2 2940 3270 -2 195 42 0 0 chr2 79788038 79788062 -170899792 + (CA)n Simple_repeat Simple_repeat 2 25 0 554 167 0 49 chr2 79788830 79788932 -170898922 - AluJb SINE Alu -185 127 31 1708 144 0 93 chr2 79788938 79789271 -170898583 - AluJb SINE Alu 0 302 1 2146 188 30 9 chr2 79789658 79790095 -170897759 - MLT1C LTR MaLR -6 461 16 205 219 0 0 chr2 79791203 79791244 -170896610 - L2 LINE L2 -46 3226 3186 578 205 57 0 chr2 79791261 79791383 -170896471 - MER58B DNA MER1_type 0 341 213 9913 147 33 20 chr2 79791383 79793220 -170894634 - Tigger1 DNA MER2_type 0 2418 558 23 54 0 0 chr2 79793269 79793306 -170894548 + AT_rich Low_complexity Low_complexity 1 37 0 2001 152 12 0 chr2 79793314 79793642 -170894212 - Tigger1 DNA MER2_type -1858 560 229 1428 180 3 35 chr2 79793647 79793930 -170893924 + AluJo SINE Alu 6 279 -33 888 189 25 10 chr2 79793930 79794131 -170893723 - Tigger1 DNA MER2_type -2213 205 2 430 220 173 7 chr2 79794132 79794282 -170893572 - MER58B DNA MER1_type -127 214 40 417 220 262 0 chr2 79794893 79795033 -170892821 + MER45A DNA AcHobo 8 178 0 429 70 0 0 chr2 79795545 79795602 -170892252 + (TGGA)n Simple_repeat Simple_repeat 1 57 0 380 268 96 32 chr2 79796374 79796531 -170891323 - MER5A DNA MER1_type -8 181 15 180 135 0 0 chr2 79796606 79796643 -170891211 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 219 300 29 36 chr2 79796648 79796753 -170891101 + MER5A DNA MER1_type 66 162 -16 180 324 57 29 chr2 79797605 79797710 -170890144 - MIR SINE MIR -61 147 40 377 298 41 8 chr2 79798063 79798184 -170889670 - L2 LINE L2 -2 3311 3187 411 21 0 0 chr2 79798784 79798832 -170889022 + (CA)n Simple_repeat Simple_repeat 1 48 0 7685 13 0 0 chr2 79799170 79800744 -170887110 - L1HS LINE L1 -2 6153 4580 6603 18 0 0 chr2 79800741 79801538 -170886316 + L1HS LINE L1 3808 4604 -1542 * 26 0 0 0 chr2 79801565 79801591 -170886263 + AT_rich Low_complexity Low_complexity 1 26 0 853 298 98 22 chr2 79801653 79802053 -170885801 + LTR16A LTR ERVL 21 450 0 1995 126 7 3 chr2 79802199 79802485 -170885369 - AluSx SINE Alu -18 294 8 230 291 91 18 chr2 79803912 79804022 -170883832 + MIR SINE MIR 86 203 -59 450 273 43 31 chr2 79804279 79804440 -170883414 - MIR SINE MIR -42 220 58 2486 54 0 3 chr2 79804654 79804950 -170882904 + AluY SINE Alu 1 295 -16 641 224 52 55 chr2 79805220 79805304 -170882550 + L1MC5 LINE L1 7291 7374 -587 2167 117 37 40 chr2 79805304 79805680 -170882174 - THE1C LTR MaLR 0 375 1 641 224 52 55 chr2 79805680 79805867 -170881987 + L1MC5 LINE L1 7374 7561 -400 1915 164 117 34 chr2 79806266 79806737 -170881117 - L1MCa LINE L1 -4035 2391 1870 1840 154 0 6 chr2 79806737 79807061 -170880793 - L1MB1 LINE L1 0 6168 5847 1915 164 117 34 chr2 79807061 79807121 -170880733 - L1MCa LINE L1 -4556 1870 1816 23 0 0 0 chr2 79807150 79807173 -170880681 + AT_rich Low_complexity Low_complexity 1 23 0 2296 104 0 0 chr2 79808718 79809015 -170878839 + AluSc SINE Alu 1 297 -12 2388 49 3 20 chr2 79810384 79810689 -170877165 + AluY SINE Alu 1 300 -11 691 226 52 59 chr2 79811092 79811398 -170876456 - Tigger8 DNA MER2_type -142 524 221 643 285 89 21 chr2 79811480 79811715 -170876139 + MIR SINE MIR 10 260 -2 28 86 0 0 chr2 79811911 79811981 -170875873 + AT_rich Low_complexity Low_complexity 1 70 0 242 250 22 81 chr2 79812084 79812220 -170875634 - MLT1I LTR MaLR -2 407 280 195 208 151 47 chr2 79812967 79813073 -170874781 - L3 LINE CR1 -400 1177 1061 611 321 72 22 chr2 79813110 79813428 -170874426 - MLT1I LTR MaLR -5 404 71 1929 149 0 14 chr2 79813713 79814024 -170873830 - AluSx SINE Alu 0 307 1 2627 100 3 13 chr2 79815098 79815477 -170872377 - THE1C LTR MaLR 0 375 1 2396 84 0 0 chr2 79815772 79816069 -170871785 + AluY SINE Alu 1 297 -14 266 290 184 29 chr2 79816366 79816573 -170871281 - MIR SINE MIR 0 262 24 272 348 44 61 chr2 79816672 79816968 -170870886 - L2 LINE L2 -623 2691 2401 2158 123 7 0 chr2 79817365 79817674 -170870180 + AluY SINE Alu 1 311 0 692 196 138 62 chr2 79818045 79818378 -170869476 + MSTD LTR MaLR 6 396 0 311 297 110 26 chr2 79819280 79819435 -170868419 - L1ME LINE L1 -320 5801 5634 250 324 9 38 chr2 79819531 79819636 -170868218 + L2 LINE L2 3171 3272 0 564 297 28 11 chr2 79820315 79820497 -170867357 - L1ME2 LINE L1 0 6164 5980 3147 250 75 16 chr2 79820511 79822252 -170865602 - L1ME2 LINE L1 -366 5798 3946 183 339 48 40 chr2 79823057 79823181 -170864673 + MIR SINE MIR 126 250 -12 3085 52 25 29 chr2 79826006 79826497 -170861357 + MLT2A1 LTR ERVL 1 453 0 289 67 22 0 chr2 79826503 79826548 -170861306 + MLT2A2 LTR ERVL 408 453 0 304 316 59 87 chr2 79826580 79826833 -170861021 + MIR SINE MIR 1 246 -16 25 31 0 0 chr2 79827064 79827096 -170860758 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 79827202 79827231 -170860623 + AT_rich Low_complexity Low_complexity 1 29 0 242 85 0 21 chr2 79828299 79828346 -170859508 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 22 35 0 0 chr2 79828632 79828661 -170859193 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr2 79829528 79829561 -170858293 + AT_rich Low_complexity Low_complexity 1 33 0 406 287 41 8 chr2 79829723 79829845 -170858009 - L2 LINE L2 -1 3312 3187 2109 128 0 10 chr2 79830013 79830326 -170857528 - AluSx SINE Alu -2 310 1 886 284 121 65 chr2 79830480 79831069 -170856785 - L2 LINE L2 -864 2450 1829 201 143 32 16 chr2 79831177 79831226 -170856628 + (TA)n Simple_repeat Simple_repeat 2 54 -11 2230 118 0 0 chr2 79831226 79831531 -170856323 + AluY SINE Alu 1 305 -6 201 143 32 16 chr2 79831531 79831544 -170856310 + (TA)n Simple_repeat Simple_repeat 54 65 0 319 271 153 6 chr2 79831544 79831721 -170856133 + L1MD2 LINE L1 6135 6337 -22 463 330 158 0 chr2 79831729 79831932 -170855922 + MIR SINE MIR 28 262 0 1517 158 7 40 chr2 79832112 79832385 -170855469 + AluSx SINE Alu 1 264 -48 366 80 0 0 chr2 79832440 79832490 -170855364 + (GA)n Simple_repeat Simple_repeat 1 50 0 220 222 19 0 chr2 79832569 79832623 -170855231 - L2 LINE L2 -1481 1833 1779 263 167 19 0 chr2 79832678 79832732 -170855122 - L2 LINE L2 -1481 1833 1779 21 36 0 0 chr2 79832953 79832981 -170854873 + AT_rich Low_complexity Low_complexity 1 28 0 197 247 165 12 chr2 79833114 79833199 -170854655 + MIR SINE MIR 79 176 -86 2593 146 2 12 chr2 79833247 79833678 -170854176 - L1PB1 LINE L1 -8 6143 5717 12111 189 87 4 chr2 79833680 79837945 -170849909 - L1PBa LINE L1 -2238 4624 6 1350 172 0 0 chr2 79838144 79838371 -170849483 - AluSg/x SINE Alu -4 308 82 635 200 0 17 chr2 79838384 79838504 -170849350 - FLAM_C SINE Alu -15 118 1 253 299 52 10 chr2 79838649 79838746 -170849108 + MIR SINE MIR 162 262 0 317 318 46 106 chr2 79838874 79839177 -170848677 + MLT1J LTR MaLR 36 315 -196 748 200 47 58 chr2 79839177 79839367 -170848487 + MER5A DNA MER1_type 1 188 -1 317 318 46 106 chr2 79839367 79839431 -170848423 + MLT1J LTR MaLR 315 381 -130 182 388 52 0 chr2 79839956 79840072 -170847782 - L2 LINE L2 -8 3264 3143 1915 220 20 37 chr2 79840154 79840641 -170847213 - L1MA9 LINE L1 -38 6274 5796 300 326 0 0 chr2 79840670 79840759 -170847095 - L1MC4 LINE L1 -1339 6703 6615 1998 159 116 16 chr2 79840771 79841228 -170846626 - Tigger2 DNA MER2_type 0 2718 2 211 256 0 0 chr2 79841228 79841271 -170846583 + (TA)n Simple_repeat Simple_repeat 1 43 0 761 219 49 0 chr2 79841271 79841495 -170846359 - L1MA9 LINE L1 -370 5798 5547 304 320 66 8 chr2 79841495 79841617 -170846237 - L1ME LINE L1 -639 5482 5354 361 314 69 25 chr2 79841751 79841910 -170845944 + MIR SINE MIR 23 188 -74 296 294 119 6 chr2 79841911 79842088 -170845766 + L2 LINE L2 1761 1957 -1357 540 317 80 45 chr2 79842090 79842639 -170845215 + L2 LINE L2 1873 2440 -874 190 333 11 32 chr2 79842703 79842796 -170845058 + L2 LINE L2 2600 2690 -624 494 285 29 12 chr2 79843532 79843704 -170844150 + LTR16C LTR ERVL 263 437 -54 1745 155 137 29 chr2 79844021 79844407 -170843447 - MSTA LTR MaLR 0 428 1 275 284 49 25 chr2 79844575 79844656 -170843198 + L2 LINE L2 2976 3058 -214 43941 43 1 4 chr2 79844921 79851097 -170836757 - L1PA3 LINE L1 0 6155 1 533 325 96 42 chr2 79852060 79852166 -170835688 - L2 LINE L2 -1504 1810 1711 2154 92 24 0 chr2 79852166 79852461 -170835393 + AluY SINE Alu 1 302 -9 533 325 96 42 chr2 79852461 79852659 -170835195 - L2 LINE L2 -1603 1711 1525 2219 161 13 10 chr2 79852659 79853057 -170834797 + MER57A LTR ERV1 5 403 0 533 325 96 42 chr2 79853057 79853222 -170834632 - L2 LINE L2 -1789 1525 1315 484 79 0 0 chr2 79854433 79854496 -170833358 - LTR17 LTR ERV1 -717 63 1 328 324 45 0 chr2 79854673 79854784 -170833070 + L2 LINE L2 3190 3305 -8 218 192 64 13 chr2 79855342 79855420 -170832434 + (TCTG)n Simple_repeat Simple_repeat 1 82 0 1812 134 47 78 chr2 79855694 79856081 -170831773 + THE1C LTR MaLR 1 375 0 9283 133 18 38 chr2 79856083 79857693 -170830161 + THE1C-int LTR MaLR 3 1580 0 540 171 0 29 chr2 79857693 79857798 -170830056 + THE1C LTR MaLR 1 102 -326 192 214 0 48 chr2 79857954 79857996 -170829858 + MIR SINE MIR 53 92 -170 275 31 0 0 chr2 79858019 79858051 -170829803 - tRNA-Ile-ATT tRNA tRNA -38 39 8 190 180 100 0 chr2 79858122 79858172 -170829682 + MIR SINE MIR 165 219 -43 683 345 92 35 chr2 79858550 79859465 -170828389 - L2 LINE L2 -2 3311 2316 722 302 115 23 chr2 79859516 79859821 -170828033 + MLT1I LTR MaLR 63 395 -14 606 347 22 7 chr2 79859838 79860115 -170827739 - L2 LINE L2 -998 2316 2036 182 358 21 0 chr2 79860166 79860261 -170827593 - L2 LINE L2 -1385 1929 1833 407 19 19 0 chr2 79860322 79860374 -170827480 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 275 333 92 42 chr2 79861524 79861644 -170826210 - L2 LINE L2 -31 3241 3116 1989 234 103 63 chr2 79861932 79862815 -170825039 - L1ME2 LINE L1 -12 6221 5305 1723 188 91 33 chr2 79863475 79864010 -170823844 + MLT2A2 LTR ERVL 1 554 0 317 331 109 6 chr2 79864245 79864420 -170823434 + L2 LINE L2 1093 1285 -2029 722 294 57 11 chr2 79864592 79864960 -170822894 - L1ME2 LINE L1 -3433 2782 2398 447 319 47 40 chr2 79864978 79865254 -170822600 - L1ME2 LINE L1 -4732 1664 1387 1038 204 196 12 chr2 79865728 79865802 -170822052 - AluJb SINE Alu 0 625 566 1208 93 0 11 chr2 79865802 79865984 -170821870 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1038 204 196 12 chr2 79865984 79866210 -170821644 - AluJb SINE Alu -59 566 383 486 0 0 0 chr2 79866210 79866264 -170821590 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 1038 204 196 12 chr2 79866264 79866359 -170821495 - AluJb SINE Alu -242 383 1 185 128 0 26 chr2 79866637 79866676 -170821178 + (TCTCC)n Simple_repeat Simple_repeat 3 40 0 606 259 81 6 chr2 79866712 79866886 -170820968 + MIR SINE MIR 76 262 0 765 351 61 61 chr2 79866932 79867939 -170819915 + L2 LINE L2 2177 3189 -124 1623 292 29 34 chr2 79868053 79868809 -170819045 + HAL1b LINE L1 159 910 -438 248 321 92 43 chr2 79868811 79868995 -170818859 - L2 LINE L2 -88 3225 3033 21 0 0 0 chr2 79870775 79870796 -170817058 + AT_rich Low_complexity Low_complexity 1 21 0 34 0 0 0 chr2 79871578 79871612 -170816242 + AT_rich Low_complexity Low_complexity 1 34 0 1419 207 55 54 chr2 79871951 79872443 -170815411 - LTR28 LTR ERV1 -131 505 3 1324 170 0 5 chr2 79872847 79873059 -170814795 - AluJb SINE Alu -15 297 87 305 348 66 25 chr2 79873242 79873486 -170814368 - L1ME LINE L1 -569 5552 5299 2632 75 29 0 chr2 79874249 79874594 -170813260 - THE1A LTR MaLR 0 355 1 2574 61 3 0 chr2 79876236 79876546 -170811308 - AluSp SINE Alu -2 311 1 370 306 89 74 chr2 79877409 79877667 -170810187 - LTR16A LTR ERVL -93 357 96 2238 205 84 34 chr2 79880155 79880327 -170807527 + L1MC3 LINE L1 7153 7315 -470 1172 194 47 101 chr2 79880327 79880713 -170807141 - MLT1A1 LTR MaLR 0 365 1 2238 205 84 34 chr2 79880713 79881135 -170806719 + L1MC3 LINE L1 7315 7777 -8 781 278 52 0 chr2 79881274 79881486 -170806368 - MER58A DNA MER1_type 0 224 2 2298 88 0 31 chr2 79882878 79883196 -170804658 - AluSp SINE Alu -5 308 1 263 348 7 43 chr2 79883968 79884106 -170803748 + MIR3 SINE MIR 37 169 -39 993 300 122 12 chr2 79886017 79886541 -170801313 - HERVL LTR ERVL -936 4549 3967 300 250 0 54 chr2 79886551 79886643 -170801211 - MER5C DNA MER1_type 0 324 238 375 345 66 25 chr2 79886672 79886991 -170800863 - HERVL LTR ERVL -1716 3938 3607 1750 268 53 48 chr2 79887377 79887960 -170799894 - MLT1E LTR MaLR 0 593 8 361 307 42 34 chr2 79888107 79888345 -170799509 - HERVL LTR ERVL -2739 2915 2676 1478 107 45 18 chr2 79888349 79888573 -170799281 + MER30 DNA MER1_type 1 230 0 3652 41 0 0 chr2 79889148 79889590 -170798264 - L1P LINE L1 -1134 5012 4571 1702 154 18 11 chr2 79889654 79889959 -170797895 - AluSx SINE Alu 0 307 1 2376 81 13 3 chr2 79890558 79890866 -170796988 - AluY SINE Alu 0 311 1 954 294 123 39 chr2 79891073 79891569 -170796285 - MLT1G LTR MaLR -17 573 30 2207 121 3 0 chr2 79891569 79891874 -170795980 + AluSq SINE Alu 3 308 -5 954 294 123 39 chr2 79891874 79891897 -170795957 - MLT1G LTR MaLR -560 30 10 21 57 0 0 chr2 79894365 79894400 -170793454 + AT_rich Low_complexity Low_complexity 1 35 0 1840 192 2 56 chr2 79895052 79895464 -170792390 - MLT1B LTR MaLR 0 390 1 378 278 18 95 chr2 79895491 79895660 -170792194 + MIR SINE MIR 2 157 -105 903 273 34 4 chr2 79895804 79896071 -170791783 + MER93a LTR ERV1 128 402 0 269 302 21 0 chr2 79896076 79896172 -170791682 + MIR SINE MIR 154 251 -11 758 243 65 99 chr2 79897390 79897655 -170790199 + L1ME LINE L1 520 768 -5302 1990 61 11 43 chr2 79897655 79897932 -170789922 - AluY SINE Alu -7 304 37 758 243 65 99 chr2 79897932 79898069 -170789785 + L1ME LINE L1 768 908 -5162 239 320 10 30 chr2 79898193 79898293 -170789561 - MER5B DNA MER1_type -50 128 31 4501 169 6 10 chr2 79898293 79899079 -170788775 + LTR39 LTR ERV1 1 783 0 220 237 17 0 chr2 79899106 79899165 -170788689 - MIR3 SINE MIR -41 167 108 5257 149 12 29 chr2 79899329 79900239 -170787615 + MER4D LTR ERV1 1 895 -8 440 313 47 33 chr2 79900299 79900574 -170787280 - MER96B DNA MER1_type? -8 409 131 336 232 108 62 chr2 79901641 79901835 -170786019 + LTR37B LTR ERV1 6 208 -260 312 231 2 8 chr2 79901920 79902012 -170785842 + LTR37A LTR ERV1 298 415 -53 1955 243 54 101 chr2 79902039 79903114 -170784740 + L1ME LINE L1 891 1891 -4189 1948 149 47 3 chr2 79903114 79903436 -170784418 + MER1B DNA MER1_type 2 337 0 1955 243 54 101 chr2 79903436 79903720 -170784134 + L1ME LINE L1 1891 2187 -3893 189 107 0 0 chr2 79903784 79903812 -170784042 + (T)n Simple_repeat Simple_repeat 1 28 0 2351 187 10 0 chr2 79903812 79904229 -170783625 + LOR1b LTR ERV1 41 461 0 1940 175 22 8 chr2 79904229 79904594 -170783260 + LOR1b-int LTR ERV1 1 370 -7750 * 3452 132 33 21 chr2 79904593 79904678 -170783176 + LOR1-int LTR ERV1 1912 1994 -6126 2184 70 42 11 chr2 79904678 79904986 -170782868 + AluY SINE Alu 1 311 0 3452 132 33 21 chr2 79904986 79905558 -170782296 + LOR1-int LTR ERV1 1994 2577 -5543 * 7710 106 25 25 chr2 79905540 79906785 -170781069 + LOR1-int LTR ERV1 2735 3979 -4141 1458 194 247 110 chr2 79906785 79907404 -170780450 + MER52A LTR ERV1 645 1348 -407 2099 240 16 47 chr2 79907439 79908019 -170779835 + MER52A LTR ERV1 610 1751 -4 4156 133 34 31 chr2 79908024 79908790 -170779064 + LOR1-int LTR ERV1 3984 4751 -3369 1754 165 58 58 chr2 79908791 79909155 -170778699 + THE1B LTR MaLR 1 364 0 10488 113 1 1 chr2 79909156 79910590 -170777264 + THE1B-int LTR MaLR 2 1435 -145 1001 191 47 147 chr2 79910591 79911197 -170776657 - LTR12 LTR ERV1 -234 1682 55 236 269 0 0 chr2 79911197 79911249 -170776605 - LTR30 LTR ERV1 -670 52 1 1080 74 0 0 chr2 79911249 79911398 -170776456 + THE1B-int LTR MaLR 1432 1580 0 2173 145 31 14 chr2 79911398 79911756 -170776098 + THE1B LTR MaLR 1 364 0 4810 102 22 21 chr2 79911774 79912538 -170775316 + LOR1b-int LTR ERV1 4760 5524 -2596 1758 117 0 0 chr2 79912537 79912793 -170775061 + LOR1b-int LTR ERV1 5809 6064 -2056 * 619 109 0 11 chr2 79912792 79912884 -170774970 + LOR1b-int LTR ERV1 8030 8120 0 * 2364 179 34 2 chr2 79912884 79913331 -170774523 + LOR1b LTR ERV1 1 461 0 1149 161 48 0 chr2 79913340 79913526 -170774328 + AluJb SINE Alu 97 291 -21 1704 273 107 24 chr2 79913538 79914570 -170773284 + L1ME1 LINE L1 2304 3249 -2897 1305 224 80 49 chr2 79914570 79915022 -170772832 + MER31B LTR ERV1 1 466 0 1704 273 107 24 chr2 79915022 79915163 -170772691 + L1ME1 LINE L1 3249 3377 -2769 2056 118 11 0 chr2 79915163 79915474 -170772380 - AluSx SINE Alu 0 314 1 1704 273 107 24 chr2 79915474 79915542 -170772312 + L1ME1 LINE L1 3377 3677 -2469 315 0 0 0 chr2 79915569 79915604 -170772250 + (T)n Simple_repeat Simple_repeat 1 35 0 572 178 9 169 chr2 79915757 79915982 -170771872 - LTR68 LTR ERV1 -307 433 245 694 223 100 87 chr2 79916120 79916501 -170771353 + MER50 LTR ERV1 11 396 -338 564 67 67 11 chr2 79916503 79916592 -170771262 + AluSc SINE Alu 195 288 -21 1299 194 53 8 chr2 79916640 79916903 -170770951 + MER50 LTR ERV1 455 729 -5 266 137 95 74 chr2 79917197 79917292 -170770562 + MER51D LTR ERV1 517 613 -44 1786 217 86 26 chr2 79917391 79918117 -170769737 + L1ME1 LINE L1 5036 5806 -358 1797 198 21 18 chr2 79918120 79918504 -170769350 - MER88 LTR ERVL 0 464 80 1020 248 74 15 chr2 79918546 79918885 -170768969 + L1ME1 LINE L1 5803 6161 -5 228 163 38 75 chr2 79919091 79919171 -170768683 + LTR10E LTR ERV1 320 396 -237 349 255 262 14 chr2 79919295 79919436 -170768418 - MER5A DNA MER1_type -9 180 5 326 267 128 43 chr2 79919531 79919718 -170768136 + MIR SINE MIR 50 252 -10 251 265 0 7 chr2 79920303 79920439 -170767415 + CT-rich Low_complexity Low_complexity 1 135 0 370 180 45 11 chr2 79921169 79921258 -170766596 - MIR3 SINE MIR -12 196 105 942 209 73 19 chr2 79921774 79921807 -170766047 + AluJo SINE Alu 85 115 -197 236 91 23 0 chr2 79921807 79921851 -170766003 + (CAAA)n Simple_repeat Simple_repeat 4 48 0 942 209 73 19 chr2 79921851 79922023 -170765831 + AluJo SINE Alu 115 301 -11 849 340 142 24 chr2 79922275 79923246 -170764608 + L2 LINE L2 1997 3123 -149 270 0 0 0 chr2 79923246 79923276 -170764578 + (CA)n Simple_repeat Simple_repeat 2 31 0 849 340 142 24 chr2 79923276 79923430 -170764424 + L2 LINE L2 3123 3257 -15 22 70 0 0 chr2 79923565 79923608 -170764246 + AT_rich Low_complexity Low_complexity 1 43 0 505 229 57 46 chr2 79924486 79924748 -170763106 - L1MC5 LINE L1 -78 7883 7619 1705 175 13 25 chr2 79924814 79925128 -170762726 + AluJb SINE Alu 3 312 0 181 250 181 14 chr2 79925579 79925651 -170762203 + L2 LINE L2 3230 3313 0 1256 265 73 13 chr2 79925811 79926196 -170761658 - L1MD2 LINE L1 -246 6182 5775 * 4469 257 35 16 chr2 79926185 79926650 -170761204 - L1MD2 LINE L1 -861 5354 4899 2013 136 8 63 chr2 79926650 79926877 -170760977 - THE1C LTR MaLR 0 375 178 2035 113 21 3 chr2 79926877 79927168 -170760686 + AluSx SINE Alu 1 296 -16 2013 136 8 63 chr2 79927168 79927337 -170760517 - THE1C LTR MaLR -197 178 1 4469 257 35 16 chr2 79927337 79928436 -170759418 - L1MD2 LINE L1 -1316 4899 3761 292 291 10 19 chr2 79928609 79928712 -170759142 - LTR68 LTR ERV1 -309 431 330 506 169 59 44 chr2 79928712 79928848 -170759006 - L1ME1 LINE L1 -326 5840 5703 289 316 0 11 chr2 79929684 79929779 -170758075 - MIR SINE MIR -46 216 123 360 0 0 0 chr2 79930312 79930352 -170757502 + (TG)n Simple_repeat Simple_repeat 2 41 0 201 39 0 0 chr2 79930354 79930380 -170757474 + (GA)n Simple_repeat Simple_repeat 1 26 0 241 259 47 0 chr2 79980482 79980567 -170707287 - L1M4 LINE L1 -1155 4991 4903 3289 210 19 5 chr2 79980639 79981283 -170706571 - Tigger6a DNA MER2_type -427 656 4 2358 76 9 16 chr2 79981454 79981769 -170706085 - AluSq SINE Alu 0 313 1 391 304 156 47 chr2 79981920 79982433 -170705421 - L1MD2 LINE L1 -4200 2196 1628 2602 176 66 2 chr2 79982575 79983105 -170704749 + L1MB3 LINE L1 5620 6183 0 1659 181 55 0 chr2 79983112 79983404 -170704450 + AluJo SINE Alu 1 308 -4 23 33 0 0 chr2 79983448 79983478 -170704376 + AT_rich Low_complexity Low_complexity 1 30 0 7569 29 22 3 chr2 79983921 79985248 -170702606 - L1PA4 LINE L1 -7 6148 4811 771 265 6 0 chr2 79985384 79985550 -170702304 - MER5A DNA MER1_type -14 175 9 2450 68 0 0 chr2 79985668 79985961 -170701893 + AluY SINE Alu 1 293 -18 210 410 0 9 chr2 79985992 79986097 -170701757 - MIR SINE MIR -124 138 35 198 0 0 0 chr2 79987040 79987062 -170700792 + (CA)n Simple_repeat Simple_repeat 2 23 0 24 67 0 0 chr2 79987275 79987320 -170700534 + AT_rich Low_complexity Low_complexity 1 45 0 303 295 84 35 chr2 79987538 79987864 -170699990 + L1ME LINE L1 5304 5655 -466 23 0 0 0 chr2 79987992 79988015 -170699839 + AT_rich Low_complexity Low_complexity 1 23 0 1544 179 27 24 chr2 79988820 79989116 -170698738 + AluJb SINE Alu 3 299 -13 2729 137 19 0 chr2 79989154 79989579 -170698275 + MER57B LTR ERV1 2 434 0 4068 146 18 26 chr2 79989579 79990257 -170697597 + MER57B-int LTR ERV1 1 672 -6865 3481 132 44 6 chr2 79990254 79990988 -170696866 + MER51-int LTR ERV1 288 1136 -4810 * 5884 177 78 35 chr2 79990978 79992029 -170695825 + MER51-int LTR ERV1 1371 2375 -5061 2138 91 3 17 chr2 79992029 79992327 -170695527 - AluSc SINE Alu -15 294 1 5884 177 78 35 chr2 79992327 79992568 -170695286 + MER51-int LTR ERV1 2375 2604 -4832 2420 91 0 0 chr2 79992568 79992877 -170694977 - AluY SINE Alu -2 309 1 5884 177 78 35 chr2 79992877 79993815 -170694039 + MER51-int LTR ERV1 2604 5205 -2231 3726 91 27 0 chr2 79993820 79994345 -170693509 + MER51-int LTR ERV1 5309 5847 -1690 23 54 0 0 chr2 79994703 79994740 -170693114 + AT_rich Low_complexity Low_complexity 1 37 0 28 48 0 0 chr2 79994815 79994857 -170692997 + AT_rich Low_complexity Low_complexity 1 42 0 1762 144 31 10 chr2 79994985 79995276 -170692578 + AluJo SINE Alu 1 297 -15 189 0 0 0 chr2 79995427 79995448 -170692406 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 843 214 46 165 chr2 79997302 79997687 -170690167 + MLT1G LTR MaLR 56 344 -246 7809 18 0 0 chr2 79997687 79998703 -170689151 - L1PA3 LINE L1 -3 6152 5137 843 214 46 165 chr2 79998703 79998924 -170688930 + MLT1G LTR MaLR 344 590 0 377 330 214 32 chr2 79999038 79999384 -170688470 - L3 LINE CR1 -512 1065 657 245 352 71 47 chr2 80000096 80000434 -170687420 + L2 LINE L2 2356 2701 -613 194 313 111 0 chr2 80000459 80000558 -170687296 - L2 LINE L2 -16 3256 3147 242 359 22 0 chr2 80001884 80001976 -170685878 + MIR SINE MIR 159 252 -10 210 306 0 0 chr2 80003360 80003409 -170684445 - L2 LINE L2 -14 3258 3210 1590 199 29 28 chr2 80003935 80004356 -170683498 + L1MD3 LINE L1 7049 7701 -294 21 36 0 0 chr2 80005368 80005396 -170682458 + AT_rich Low_complexity Low_complexity 1 28 0 1691 125 6 110 chr2 80005735 80005926 -170681928 - AluY SINE Alu -17 294 85 189 0 0 0 chr2 80005926 80005947 -170681907 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 2146 106 0 0 chr2 80005947 80006230 -170681624 - AluSc SINE Alu -26 283 1 1691 125 6 110 chr2 80006230 80006365 -170681489 - AluY SINE Alu -224 87 1 976 290 63 20 chr2 80006527 80007019 -170680835 + L2 LINE L2 2606 3130 -183 673 310 93 56 chr2 80007060 80007524 -170680330 + L2 LINE L2 2829 3309 -4 326 326 69 29 chr2 80007674 80007849 -170680005 - MLT1J LTR MaLR -93 418 237 504 86 0 0 chr2 80009339 80009409 -170678445 + (TCCCC)n Simple_repeat Simple_repeat 5 74 0 8777 36 2 0 chr2 80009979 80011055 -170676799 - L1P LINE L1 -1248 4898 3821 2188 110 0 0 chr2 80011056 80011346 -170676508 - AluSq SINE Alu -23 290 1 2026 135 7 3 chr2 80011346 80011642 -170676212 - AluSx SINE Alu -11 301 5 198 0 0 0 chr2 80011739 80011761 -170676093 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 1759 137 27 0 chr2 80011868 80012187 -170675667 + AluSx SINE Alu 14 339 0 2613 174 2 40 chr2 80012804 80013205 -170674649 + MER66B LTR ERV1 28 410 -76 1035 72 0 182 chr2 80013205 80013441 -170674413 - 7SK RNA RNA 0 193 1 2613 174 2 40 chr2 80013441 80013516 -170674338 + MER66B LTR ERV1 410 486 0 21 0 0 0 chr2 80014433 80014454 -170673400 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 80014498 80014524 -170673330 + AT_rich Low_complexity Low_complexity 1 26 0 323 284 150 71 chr2 80014981 80015375 -170672479 + L2 LINE L2 2818 3242 -71 240 264 0 0 chr2 80015710 80015763 -170672091 + L2 LINE L2 3252 3304 -9 268 241 134 27 chr2 80016466 80016578 -170671276 - L1ME LINE L1 -460 5661 5538 1177 204 79 62 chr2 80016992 80017345 -170670509 - MLT1B LTR MaLR 0 390 32 4425 244 67 32 chr2 80018528 80021077 -170666777 + L1ME1 LINE L1 3502 6148 -18 1607 219 134 77 chr2 80021926 80022612 -170665242 + MER50 LTR ERV1 10 734 0 22 0 0 0 chr2 80022839 80022861 -170664993 + AT_rich Low_complexity Low_complexity 1 22 0 404 213 32 11 chr2 80022875 80022969 -170664885 + MER21B LTR ERV1 1 96 -767 4028 217 30 6 chr2 80022983 80023807 -170664047 + MER21B LTR ERV1 19 862 -1 612 245 135 26 chr2 80024191 80024383 -170663471 - MIR SINE MIR -47 215 3 1333 217 33 56 chr2 80024442 80024802 -170663052 + MLT2C1 LTR ERVL 1 352 -45 252 172 0 0 chr2 80024803 80024861 -170662993 + CT-rich Low_complexity Low_complexity 1 58 0 929 290 163 50 chr2 80024896 80025911 -170661943 + HAL1 LINE L1 743 1871 -636 398 233 8 0 chr2 80027083 80027216 -170660638 + (TG)n Simple_repeat Simple_repeat 2 135 0 270 284 102 16 chr2 80029208 80029335 -170658519 - MIR SINE MIR -6 256 119 1548 198 10 10 chr2 80029399 80029707 -170658147 - AluJo SINE Alu -1 311 4 186 388 66 16 chr2 80030764 80030885 -170656969 + L2 LINE L2 2934 3060 -212 32 67 0 0 chr2 80032177 80032237 -170655617 + AT_rich Low_complexity Low_complexity 1 60 0 320 350 85 55 chr2 80032983 80033514 -170654340 + MLT1K LTR MaLR 39 585 -3 431 323 70 35 chr2 80033752 80033981 -170653873 + MIR SINE MIR 25 261 -1 219 356 0 40 chr2 80034267 80034368 -170653486 + MER5A DNA MER1_type 93 189 0 521 303 0 6 chr2 80034378 80034553 -170653301 + MER5B DNA MER1_type 5 178 0 470 337 30 25 chr2 80034577 80034779 -170653075 - MIR SINE MIR -11 251 49 1130 146 6 0 chr2 80035211 80035382 -170652472 - AluSx SINE Alu -140 172 1 1093 281 57 42 chr2 80035395 80035868 -170651986 - MLT1J LTR MaLR -31 480 1 260 241 48 60 chr2 80038002 80038085 -170649769 - L2 LINE L2 -18 3254 3173 24 0 0 0 chr2 80038885 80038909 -170648945 + AT_rich Low_complexity Low_complexity 1 24 0 238 353 106 12 chr2 80040658 80040743 -170647111 + L2 LINE L2 3142 3234 -38 1665 239 58 49 chr2 80043383 80043897 -170643957 - LTR40a LTR ERVL 0 519 1 285 29 0 0 chr2 80044506 80044540 -170643314 + (TG)n Simple_repeat Simple_repeat 1 34 0 421 323 75 6 chr2 80044543 80044704 -170643150 - MIR SINE MIR -2 260 89 2182 138 0 0 chr2 80047118 80047430 -170640424 - AluSx SINE Alu 0 312 1 289 307 10 30 chr2 80047437 80047538 -170640316 + L2 LINE L2 3177 3275 -38 333 293 9 0 chr2 80047563 80047669 -170640185 + (TA)n Simple_repeat Simple_repeat 2 108 0 513 254 219 5 chr2 80048281 80048486 -170639368 - MIR SINE MIR 0 262 14 1822 261 152 2 chr2 80049536 80050056 -170637798 + MLT2F LTR ERVL 1 598 -65 25 65 0 0 chr2 80050843 80050889 -170636965 + AT_rich Low_complexity Low_complexity 1 46 0 270 245 75 0 chr2 80051444 80051538 -170636316 + L1ME LINE L1 5724 5824 -297 408 285 101 25 chr2 80051622 80051780 -170636074 - MIR SINE MIR -50 212 43 718 310 63 51 chr2 80052685 80053175 -170634679 + MLT1H1 LTR MaLR 58 553 -2 5005 187 40 6 chr2 80053202 80054464 -170633390 + L1MA8 LINE L1 4993 6291 0 23 54 0 0 chr2 80054853 80054890 -170632964 + AT_rich Low_complexity Low_complexity 1 37 0 5017 187 64 26 chr2 80055043 80056593 -170631261 - L1MC2 LINE L1 0 6344 4755 262 206 29 29 chr2 80056735 80056803 -170631051 + MLT1C LTR MaLR 1 68 -399 1196 235 20 0 chr2 80056971 80057226 -170630628 + LTR53 LTR ERVL 197 456 -63 243 190 224 0 chr2 80057281 80057339 -170630515 + MLT1C LTR MaLR 52 122 -345 1661 221 52 3 chr2 80057339 80057720 -170630134 + MLT1H1-int LTR MaLR 300 699 -672 790 236 185 5 chr2 80057761 80057977 -170629877 + MLT1C LTR MaLR 206 460 -7 211 140 40 0 chr2 80057977 80058027 -170629827 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 484 276 63 94 chr2 80058786 80059019 -170628835 - HAL1 LINE L1 -4 2503 2264 2412 77 0 0 chr2 80059019 80059318 -170628536 - AluY SINE Alu -12 299 1 484 276 63 94 chr2 80059318 80059627 -170628227 - HAL1 LINE L1 -243 2264 1978 543 260 48 149 chr2 80059810 80060331 -170627523 + MER77 LTR ERV1 53 516 -89 368 22 0 0 chr2 80060331 80060377 -170627477 - MADE1 DNA Mariner 0 80 35 479 229 43 38 chr2 80060469 80060653 -170627201 + MER21B LTR ERV1 504 670 -6 397 316 151 15 chr2 80060753 80061025 -170626829 - HAL1 LINE L1 -651 1856 1548 489 274 35 69 chr2 80061071 80061418 -170626436 - HAL1 LINE L1 -1045 1462 1128 259 167 0 56 chr2 80061482 80061554 -170626300 + T-rich Low_complexity Low_complexity 1 68 0 23 33 0 0 chr2 80061775 80061805 -170626049 + AT_rich Low_complexity Low_complexity 1 30 0 225 154 0 0 chr2 80063630 80063669 -170624185 + (CA)n Simple_repeat Simple_repeat 2 40 0 240 364 51 23 chr2 80063704 80063880 -170623974 + MIR SINE MIR 12 192 -70 344 322 35 75 chr2 80066815 80067042 -170620812 - MIR SINE MIR -16 246 29 402 74 0 0 chr2 80068169 80068223 -170619631 + (TG)n Simple_repeat Simple_repeat 1 54 0 1907 119 0 0 chr2 80068629 80068889 -170618965 - AluSq SINE Alu -53 260 1 22 70 0 0 chr2 80069384 80069427 -170618427 + AT_rich Low_complexity Low_complexity 1 43 0 227 348 67 52 chr2 80069883 80070150 -170617704 - HAL1b LINE L1 -740 608 338 1505 173 3 61 chr2 80070796 80070807 -170617047 - AluJb SINE Alu 0 531 521 985 121 6 6 chr2 80070807 80070973 -170616881 + (TTCC)n Simple_repeat Simple_repeat 3 168 0 1505 173 3 61 chr2 80070973 80071346 -170616508 - AluJb SINE Alu -10 521 1 1396 237 64 48 chr2 80072083 80072476 -170615378 + MER69 DNA AcHobo 2 400 -2126 898 198 250 14 chr2 80072507 80072947 -170614907 + MER69 DNA AcHobo 1919 2462 -64 24 0 0 0 chr2 80073978 80074002 -170613852 + AT_rich Low_complexity Low_complexity 1 24 0 1168 182 230 43 chr2 80074256 80074630 -170613224 + MLT2B3 LTR ERVL 1 554 0 323 300 125 46 chr2 80074644 80074924 -170612930 + L1MC4a LINE L1 6613 6914 -894 1576 194 25 4 chr2 80075508 80075786 -170612068 + AluJb SINE Alu 1 284 -28 22 56 0 0 chr2 80075967 80076003 -170611851 + AT_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr2 80079641 80079673 -170608181 + AT_rich Low_complexity Low_complexity 1 32 0 5897 240 70 40 chr2 80080372 80081896 -170605958 + L1MDa LINE L1 42 1518 -5022 1807 208 5 22 chr2 80081896 80082266 -170605588 + MLT1A1 LTR MaLR 2 365 0 5897 240 70 40 chr2 80082266 80083126 -170604728 + L1MDa LINE L1 1518 2350 -4190 1977 109 51 0 chr2 80083126 80083401 -170604453 - AluSp SINE Alu -24 289 1 5897 240 70 40 chr2 80083401 80084734 -170603120 + L1MDa LINE L1 2350 3964 -2576 5114 143 21 6 chr2 80084740 80086037 -170601817 + L1PA16 LINE L1 4848 6157 -9 459 78 0 0 chr2 80086066 80086130 -170601724 + (CA)n Simple_repeat Simple_repeat 1 64 0 3070 241 42 20 chr2 80086130 80087168 -170600686 + L1MDa LINE L1 4185 5245 -1295 603 176 14 54 chr2 80087169 80087317 -170600537 + L1MA9 LINE L1 6133 6274 -38 353 258 109 45 chr2 80087451 80087672 -170600182 + MER106A DNA MER1_type 1 235 -1 250 241 19 0 chr2 80087940 80087994 -170599860 + GA-rich Low_complexity Low_complexity 1 55 0 580 277 133 5 chr2 80089140 80089328 -170598526 - MER58C DNA MER1_type -3 212 1 220 320 27 54 chr2 80089330 80089477 -170598377 + MIR SINE MIR 90 232 -30 212 242 39 8 chr2 80089535 80089663 -170598191 + (TTA)n Simple_repeat Simple_repeat 2 133 0 402 345 110 46 chr2 80090096 80090615 -170597239 - L2 LINE L2 -613 2701 2150 380 325 10 34 chr2 80091433 80091639 -170596215 - MIR SINE MIR -5 257 57 1404 144 22 115 chr2 80091640 80091988 -170595866 - AluJo SINE Alu 0 319 1 1844 203 14 19 chr2 80092536 80092901 -170594953 - MER89 LTR ERV1 0 559 197 404 115 10 125 chr2 80092878 80092974 -170594880 - MER89 LTR ERV1 -474 85 1 * 370 299 24 0 chr2 80093831 80093958 -170593896 + MIR SINE MIR 125 254 -8 231 36 0 0 chr2 80093959 80093987 -170593867 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2116 110 10 10 chr2 80094995 80095303 -170592551 + AluSx SINE Alu 1 308 -4 1547 157 56 0 chr2 80095336 80095604 -170592250 - AluSx SINE Alu -25 287 5 304 311 50 13 chr2 80095731 80095969 -170591885 + L1ME3A LINE L1 3881 4127 -2019 33 43 0 0 chr2 80096230 80096277 -170591577 + AT_rich Low_complexity Low_complexity 1 47 0 796 324 51 16 chr2 80096632 80097256 -170590598 + L1ME3A LINE L1 5295 5940 -230 27 81 0 0 chr2 80097471 80097533 -170590321 + AT_rich Low_complexity Low_complexity 1 62 0 241 264 194 35 chr2 80097837 80097981 -170589873 - MIR SINE MIR -47 215 49 * 670 291 66 73 chr2 80097980 80098389 -170589465 - L2 LINE L2 0 3313 2908 321 299 198 12 chr2 80100211 80100378 -170587476 + MIR3 SINE MIR 6 203 -5 1802 188 31 8 chr2 80101904 80102261 -170585593 + MLT1A1 LTR MaLR 1 365 0 21 36 0 0 chr2 80102394 80102422 -170585432 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 80102752 80102781 -170585073 + AT_rich Low_complexity Low_complexity 1 29 0 358 244 89 8 chr2 80102990 80103113 -170584741 - MIR SINE MIR -12 250 118 271 361 31 26 chr2 80103423 80103617 -170584237 - L3 LINE CR1 -1131 446 252 30 27 0 0 chr2 80105674 80105711 -170582143 + AT_rich Low_complexity Low_complexity 1 37 0 3509 28 0 14 chr2 80105759 80106185 -170581669 - L1PA3 LINE L1 0 6155 5736 360 0 0 0 chr2 80106203 80106243 -170581611 + (CA)n Simple_repeat Simple_repeat 2 41 0 23 0 0 0 chr2 80106616 80106639 -170581215 + AT_rich Low_complexity Low_complexity 1 23 0 377 250 174 38 chr2 80106710 80106946 -170580908 - HAL1b LINE L1 -105 1243 976 1011 195 46 17 chr2 80106953 80107146 -170580708 - MER52A LTR ERV1 0 1755 1552 261 0 0 0 chr2 80107146 80107175 -170580679 + (TC)n Simple_repeat Simple_repeat 1 29 0 1011 195 46 17 chr2 80107175 80107222 -170580632 - MER52A LTR ERV1 -203 1552 1508 1836 111 53 0 chr2 80107340 80107602 -170580252 + AluSx SINE Alu 1 276 -36 207 0 0 0 chr2 80107605 80107628 -170580226 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 332 293 178 34 chr2 80107758 80107966 -170579888 - HAL1b LINE L1 -456 892 655 30 0 0 0 chr2 80108869 80108899 -170578955 + AT_rich Low_complexity Low_complexity 1 30 0 3039 128 7 0 chr2 80109954 80110383 -170577471 - MER1A DNA MER1_type 0 529 98 1916 169 0 3 chr2 80110384 80110692 -170577162 + AluJb SINE Alu 1 307 -5 255 170 0 0 chr2 80110697 80110744 -170577110 + A-rich Low_complexity Low_complexity 1 47 0 301 148 82 0 chr2 80110745 80110806 -170577048 - MER1A DNA MER1_type -413 114 49 837 165 0 8 chr2 80111667 80111800 -170576054 + AluJo SINE Alu 81 212 -100 297 247 35 0 chr2 80112809 80112894 -170574960 + MIR SINE MIR 119 206 -56 1007 253 43 34 chr2 80113102 80113679 -170574175 - MER76 LTR ERV -33 655 1 297 207 166 5 chr2 80114046 80114239 -170573615 - MER76 LTR ERV -464 224 1 28 0 0 0 chr2 80114667 80114695 -170573159 + AT_rich Low_complexity Low_complexity 1 28 0 1714 199 22 11 chr2 80115116 80115477 -170572377 - MLT1A1 LTR MaLR 0 365 1 697 239 74 0 chr2 80116767 80116943 -170570911 + MIR SINE MIR 53 241 -21 21 57 0 0 chr2 80117277 80117312 -170570542 + AT_rich Low_complexity Low_complexity 1 35 0 3568 42 0 7 chr2 80117349 80117800 -170570054 - LTR7 LTR ERV1 -2 448 1 2388 90 50 13 chr2 80117800 80118178 -170569676 - HERVH LTR ERV1 0 7713 7322 1399 130 19 0 chr2 80118176 80118392 -170569462 - HERVH LTR ERV1 -1894 5819 5600 * 4483 130 1 1 chr2 80118393 80119055 -170568799 - HERVH LTR ERV1 -2564 5149 4488 25805 86 45 26 chr2 80119057 80122976 -170564878 - HERVH LTR ERV1 -3720 3993 1 3377 67 0 7 chr2 80122978 80123429 -170564425 - LTR7 LTR ERV1 -2 448 1 32 0 0 0 chr2 80123461 80123493 -170564361 + AT_rich Low_complexity Low_complexity 1 32 0 295 331 21 28 chr2 80123567 80123755 -170564099 + LTR33 LTR ERVL 31 186 -337 1016 159 11 33 chr2 80123859 80124041 -170563813 + MER45A DNA AcHobo 1 178 0 232 167 31 73 chr2 80124428 80124524 -170563330 + (TTATA)n Simple_repeat Simple_repeat 4 95 0 965 168 39 5 chr2 80124838 80125041 -170562813 + Tigger2 DNA MER2_type 1 210 -2508 889 183 13 0 chr2 80125040 80125193 -170562661 + Tigger2 DNA MER2_type 2554 2708 -10 * 230 325 0 0 chr2 80125197 80125280 -170562574 + L1MC4 LINE L1 6621 6703 -1339 444 304 62 42 chr2 80125444 80125799 -170562055 - HAL1 LINE L1 -751 1756 1395 3470 207 42 34 chr2 80125840 80127111 -170560743 - L1MA8 LINE L1 -464 5827 4527 * 4572 180 36 113 chr2 80127110 80128598 -170559256 - L1MA8 LINE L1 -2005 4141 2540 2021 122 3 0 chr2 80128598 80128884 -170558970 - AluSc SINE Alu -22 287 1 2086 113 17 7 chr2 80128886 80129179 -170558675 - AluSx SINE Alu -16 296 1 4572 180 36 113 chr2 80129179 80129213 -170558641 - L1MA8 LINE L1 -3378 2768 2733 22 70 0 0 chr2 80129214 80129257 -170558597 + AT_rich Low_complexity Low_complexity 1 43 0 216 0 0 0 chr2 80129496 80129520 -170558334 + (T)n Simple_repeat Simple_repeat 1 24 0 254 379 55 7 chr2 80130540 80130685 -170557169 - MIR SINE MIR -51 211 60 1065 327 62 67 chr2 80131824 80132732 -170555122 - L1M4 LINE L1 -2391 3755 2855 420 20 0 0 chr2 80132732 80132781 -170555073 + (TG)n Simple_repeat Simple_repeat 1 49 0 1065 327 62 67 chr2 80132781 80133225 -170554629 - L1M4 LINE L1 -3291 2855 2410 21 36 0 0 chr2 80133726 80133754 -170554100 + AT_rich Low_complexity Low_complexity 1 28 0 1250 75 11 0 chr2 80133769 80133943 -170553911 - AluY SINE Alu -11 300 125 9826 30 0 1 chr2 80133944 80135889 -170551965 - L1PA3 LINE L1 0 6155 4207 4688 35 0 0 chr2 80135890 80136460 -170551394 + L1PA3 LINE L1 3626 4195 -1951 935 54 47 8 chr2 80136460 80136589 -170551265 - AluY SINE Alu -177 134 1 21 57 0 0 chr2 80136828 80136863 -170550991 + AT_rich Low_complexity Low_complexity 1 35 0 326 301 89 41 chr2 80137118 80137264 -170550590 - HAL1 LINE L1 -1168 1339 1187 939 225 37 0 chr2 80137866 80138057 -170549797 + MER20 DNA MER1_type 17 214 -5 1762 210 100 55 chr2 80138517 80139045 -170548809 + MLT2B3 LTR ERVL 1 552 -2 456 167 0 0 chr2 80139228 80139300 -170548554 - 7SK RNA RNA -1 192 121 3743 163 26 0 chr2 80139380 80140343 -170547511 + L1M2 LINE L1 4657 5641 -671 9547 82 5 16 chr2 80140343 80141652 -170546202 + HERVL LTR ERVL 1887 3180 -2474 3889 76 2 2 chr2 80141636 80142136 -170545718 + HERVL LTR ERVL 4005 4504 -1150 * 657 230 150 0 chr2 80142834 80143021 -170544833 + MER20 DNA MER1_type 1 215 -4 232 310 103 0 chr2 80143028 80143115 -170544739 - L2 LINE L2 -55 3258 3163 333 134 75 30 chr2 80143122 80143189 -170544665 - THE1C LTR MaLR -305 70 1 429 329 51 9 chr2 80143278 80143494 -170544360 - ERVL LTR ERVL -4048 1716 1492 626 269 102 0 chr2 80143618 80143804 -170544050 - LTR41 LTR ERVL -568 205 1 651 234 61 43 chr2 80143931 80144162 -170543692 - MLT1J LTR MaLR -260 251 17 194 171 146 0 chr2 80144173 80144214 -170543640 - L2 LINE L2 -958 2356 2310 346 308 79 30 chr2 80144366 80144613 -170543241 - L1MC/D LINE L1 -340 5781 5513 363 345 83 31 chr2 80144908 80145198 -170542656 - L1MC/D LINE L1 -1896 4250 3946 235 167 24 0 chr2 80145563 80145605 -170542249 + L2 LINE L2 3266 3308 -5 9621 107 36 5 chr2 80145609 80146993 -170540861 - THE1A-int LTR MaLR -153 1427 1 2665 79 3 11 chr2 80146993 80147349 -170540505 - THE1A LTR MaLR 0 355 3 246 353 89 31 chr2 80147952 80148176 -170539678 - MIR SINE MIR -14 248 12 286 371 81 11 chr2 80148205 80148391 -170539463 - MIR SINE MIR -23 239 41 24 77 0 0 chr2 80148489 80148541 -170539313 + AT_rich Low_complexity Low_complexity 1 52 0 33 25 0 0 chr2 80148755 80148795 -170539059 + AT_rich Low_complexity Low_complexity 1 40 0 27 0 0 26 chr2 80149174 80149195 -170538659 + AT_rich Low_complexity Low_complexity 1 22 -15 2004 126 7 3 chr2 80149195 80149488 -170538366 - AluSx SINE Alu -18 294 1 27 0 0 26 chr2 80149488 80149504 -170538350 + AT_rich Low_complexity Low_complexity 22 37 0 1768 194 86 8 chr2 80149920 80150317 -170537537 + MSTA LTR MaLR 1 428 0 29 28 0 0 chr2 80150435 80150471 -170537383 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr2 80150612 80150637 -170537217 + (CA)n Simple_repeat Simple_repeat 2 26 0 23 33 0 0 chr2 80151125 80151155 -170536699 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 80151341 80151367 -170536487 + AT_rich Low_complexity Low_complexity 1 26 0 292 342 27 18 chr2 80151929 80152040 -170535814 + L2 LINE L2 3196 3307 -6 361 264 194 7 chr2 80152081 80152225 -170535629 - MIR SINE MIR 0 262 92 22 56 0 0 chr2 80152409 80152445 -170535409 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr2 80152644 80152679 -170535175 + AT_rich Low_complexity Low_complexity 1 35 0 239 173 39 0 chr2 80153088 80153140 -170534714 - L1ME2 LINE L1 -105 6059 6006 372 311 103 64 chr2 80153333 80154111 -170533743 - L1MEd LINE L1 -4908 1211 404 23 0 0 0 chr2 80154111 80154134 -170533720 + AT_rich Low_complexity Low_complexity 1 23 0 198 0 0 0 chr2 80154674 80154696 -170533158 + (TTA)n Simple_repeat Simple_repeat 2 23 0 323 282 143 69 chr2 80154699 80154944 -170532910 - L1MEd LINE L1 -5849 270 8 511 275 63 54 chr2 80155156 80155472 -170532382 + L1ME4a LINE L1 5591 5909 -212 331 333 151 0 chr2 80155510 80155702 -170532152 - MIR SINE MIR -15 247 27 2182 188 39 7 chr2 80156282 80156713 -170531141 - MER65A LTR ERV1 0 445 1 212 398 0 39 chr2 80157957 80158060 -170529794 + L2 LINE L2 2562 2660 -654 21 0 0 0 chr2 80158521 80158542 -170529312 + AT_rich Low_complexity Low_complexity 1 21 0 45 62 0 0 chr2 80159559 80159639 -170528215 + AT_rich Low_complexity Low_complexity 1 80 0 1515 180 7 11 chr2 80159705 80160039 -170527815 + AluJb SINE Alu 1 333 0 243 0 0 0 chr2 80161289 80161316 -170526538 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1265 176 32 57 chr2 80161747 80162103 -170525751 - L1MA4A LINE L1 -26 6277 5871 1776 185 0 10 chr2 80162103 80162401 -170525453 + AluJb SINE Alu 1 295 -17 1265 176 32 57 chr2 80162401 80162479 -170525375 - L1MA4A LINE L1 -432 5871 5793 8210 75 109 6 chr2 80162671 80163876 -170523978 - L1P LINE L1 -4813 1333 4 4922 186 31 9 chr2 80163981 80165123 -170522731 - L1MC1 LINE L1 -144 6469 5297 17590 42 5 0 chr2 80165223 80167446 -170520408 + L1P LINE L1 1386 3619 -2527 5572 237 61 26 chr2 80167576 80170888 -170516966 - L1MC1 LINE L1 -1272 5154 1706 4902 28 0 0 chr2 80170992 80171565 -170516289 + L1PA3 LINE L1 5581 6153 -2 22 94 0 0 chr2 80172134 80172198 -170515656 + AT_rich Low_complexity Low_complexity 1 64 0 2254 101 3 7 chr2 80173070 80173378 -170514476 - AluSq SINE Alu -6 307 1 214 180 33 0 chr2 80173872 80173933 -170513921 + GA-rich Low_complexity Low_complexity 2 64 0 516 256 39 61 chr2 80174631 80174811 -170513043 - L2 LINE L2 0 3313 3138 22 35 0 0 chr2 80174811 80174840 -170513014 + AT_rich Low_complexity Low_complexity 1 29 0 1101 172 36 39 chr2 80174968 80175300 -170512554 + pTR5 LTR ERV1 738 1068 -1370 3995 255 54 16 chr2 80175488 80177641 -170510213 - L1 LINE L1 -2475 4373 2137 2078 244 110 4 chr2 80177635 80178181 -170509673 - L1 LINE L1 -5142 1707 1104 * 460 181 0 0 chr2 80178688 80178782 -170509072 - L1 LINE L1 -1314 4832 4739 22 35 0 0 chr2 80178787 80178816 -170509038 + AT_rich Low_complexity Low_complexity 1 29 0 560 179 60 37 chr2 80178817 80178951 -170508903 - L1PA16 LINE L1 -11 6155 6019 13018 258 22 21 chr2 80178952 80183522 -170504332 - L1PA12 LINE L1 -752 6832 2302 405 0 0 0 chr2 80183522 80183567 -170504287 + (TG)n Simple_repeat Simple_repeat 2 46 0 13018 258 22 21 chr2 80183567 80183689 -170504165 - L1PA12 LINE L1 -5282 2302 2182 247 270 0 70 chr2 80183927 80184027 -170503827 - L1PA12 LINE L1 -5399 2182 2090 972 320 39 55 chr2 80184135 80184754 -170503100 - L1PA12 LINE L1 -6177 1397 789 6077 195 73 15 chr2 80184765 80185094 -170502760 - L1 LINE L1 -1398 4748 4439 198 118 0 0 chr2 80185094 80185128 -170502726 + (TTTTA)n Simple_repeat Simple_repeat 4 37 0 6077 195 73 15 chr2 80185128 80186299 -170501555 - L1 LINE L1 -1707 4439 3161 34778 43 30 4 chr2 80186485 80190875 -170496979 - L1P LINE L1 -1638 4508 4 495 225 55 124 chr2 80190979 80191326 -170496528 - L1MD1 LINE L1 -8 6234 5912 5670 142 34 19 chr2 80191404 80191764 -170496090 - L1PA13 LINE L1 -19 6144 5791 1712 120 17 4 chr2 80191764 80192005 -170495849 - AluSq SINE Alu -69 244 1 5670 142 34 19 chr2 80192005 80192531 -170495323 - L1PA13 LINE L1 -372 5791 5275 2045 133 72 17 chr2 80192531 80192876 -170494978 - THE1B LTR MaLR 0 364 1 5670 142 34 19 chr2 80192876 80193408 -170494446 - L1PA13 LINE L1 -888 5275 4693 23 0 0 0 chr2 80193472 80193495 -170494359 + AT_rich Low_complexity Low_complexity 1 23 0 394 320 108 28 chr2 80193818 80194218 -170493636 - L1M4 LINE L1 -1310 4836 4405 248 353 71 27 chr2 80194513 80194808 -170493046 + L2 LINE L2 1246 1553 -1761 5560 184 68 58 chr2 80194948 80196380 -170491474 - L1MCa LINE L1 -4961 1465 20 307 314 94 83 chr2 80197297 80197778 -170490076 - LTR67 LTR ERVL -64 493 8 1363 202 39 21 chr2 80197964 80198246 -170489608 - AluJo SINE Alu -23 289 3 833 279 62 69 chr2 80198392 80198973 -170488881 - ERVL LTR ERVL -382 5382 4806 437 296 15 22 chr2 80199164 80199299 -170488555 + MIR SINE MIR 15 148 -114 649 356 114 22 chr2 80200353 80200802 -170487052 + L2 LINE L2 2819 3308 -5 318 270 131 50 chr2 80201535 80201794 -170486060 + L1ME LINE L1 4370 4649 -1497 25 31 0 0 chr2 80201911 80201943 -170485911 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 80202203 80202242 -170485612 + AT_rich Low_complexity Low_complexity 1 39 0 229 198 66 58 chr2 80202400 80202521 -170485333 - L1ME4a LINE L1 -25 6096 5975 24 0 0 0 chr2 80202623 80202647 -170485207 + AT_rich Low_complexity Low_complexity 1 24 0 303 302 10 0 chr2 80203344 80203440 -170484414 + L1ME LINE L1 5676 5772 -349 273 306 46 27 chr2 80206757 80206917 -170480937 - MIR SINE MIR -64 144 21 27 29 0 0 chr2 80207156 80207190 -170480664 + AT_rich Low_complexity Low_complexity 1 34 0 379 265 110 29 chr2 80207586 80207967 -170479887 - L1ME4a LINE L1 -1 6120 5709 244 291 101 0 chr2 80208320 80208399 -170479455 - L2 LINE L2 0 3272 3186 1409 222 45 60 chr2 80208492 80208956 -170478898 - MLT1C LTR MaLR 0 467 11 199 322 128 20 chr2 80209322 80209471 -170478383 - MIR SINE MIR -1 261 97 2381 91 3 0 chr2 80209669 80209978 -170477876 - AluSg SINE Alu 0 310 1 1473 305 65 13 chr2 80211135 80211763 -170476091 - L1M2b LINE L1 -6314 895 88 22 35 0 0 chr2 80211766 80211795 -170476059 + AT_rich Low_complexity Low_complexity 1 29 0 3442 230 50 17 chr2 80211845 80213436 -170474418 - L1MCb LINE L1 -4851 1194 5 183 129 0 0 chr2 80213977 80214008 -170473846 + (CATA)n Simple_repeat Simple_repeat 4 34 0 252 337 11 32 chr2 80215271 80215366 -170472488 + MER5B DNA MER1_type 7 99 -79 222 37 0 0 chr2 80215375 80215402 -170472452 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 4300 84 91 0 chr2 80215772 80216377 -170471477 + PABL_A LTR ERV1 1 660 0 1554 217 73 3 chr2 80217182 80217523 -170470331 - MLT1A1 LTR MaLR 0 365 1 253 290 24 48 chr2 80218826 80218950 -170468904 - MIR SINE MIR -75 187 67 810 320 108 14 chr2 80219043 80219396 -170468458 - L2 LINE L2 -514 2800 2415 250 330 102 17 chr2 80220330 80220448 -170467406 + MER5A DNA MER1_type 60 187 -2 181 256 80 56 chr2 80221156 80221281 -170466573 + MIR SINE MIR 129 256 -6 26 98 0 0 chr2 80221893 80221975 -170465879 + AT_rich Low_complexity Low_complexity 1 82 0 596 288 19 44 chr2 80222535 80222740 -170465114 + MIR SINE MIR 47 246 -16 249 254 0 0 chr2 80222810 80222865 -170464989 + L2 LINE L2 3214 3268 -4 487 318 18 18 chr2 80225161 80225331 -170462523 - MLT1I LTR MaLR -16 393 224 2831 236 46 39 chr2 80225343 80225996 -170461858 + L1MB5 LINE L1 1244 1885 -5074 2188 103 13 0 chr2 80225996 80226297 -170461557 + AluY SINE Alu 1 305 -6 2831 236 46 39 chr2 80226297 80226676 -170461178 + L1MB5 LINE L1 1885 2260 -4699 1336 225 39 31 chr2 80226670 80227084 -170460770 + L1MB5 LINE L1 5755 6171 -786 * 273 87 0 3 chr2 80227085 80227125 -170460729 - L1P4 LINE L1 -563 5598 5564 2893 134 5 9 chr2 80227166 80227615 -170460239 + L1PA14 LINE L1 5616 6062 -99 258 238 0 0 chr2 80227614 80227677 -170460177 + L1PA15 LINE L1 6101 6163 -2 * 1846 228 37 24 chr2 80227671 80228179 -170459675 + L1MB5 LINE L1 6164 6678 -307 380 219 59 89 chr2 80228232 80228328 -170459526 + L1M4 LINE L1 4938 5028 -1118 2748 23 0 0 chr2 80228328 80228631 -170459223 - AluYa5 SINE Alu -8 303 1 380 219 59 89 chr2 80228631 80228703 -170459151 + L1M4 LINE L1 5028 5101 -1045 295 244 85 0 chr2 80228880 80228962 -170458892 + L2 LINE L2 3225 3313 0 15095 32 0 1 chr2 80229275 80231858 -170455996 - L1PA3 LINE L1 0 6155 3577 252 167 0 0 chr2 80232385 80232433 -170455421 + T-rich Low_complexity Low_complexity 1 48 0 325 306 16 25 chr2 80233140 80233261 -170454593 + LTR67 LTR ERVL 105 224 -333 2802 19 0 0 chr2 80234180 80234505 -170453349 + L1PA2 LINE L1 5830 6154 -1 286 277 34 47 chr2 80236667 80236815 -170451039 - L1ME4a LINE L1 -20 6101 5956 231 167 0 0 chr2 80237010 80237052 -170450802 + (CATATA)n Simple_repeat Simple_repeat 5 46 0 523 282 57 20 chr2 80237242 80237490 -170450364 - L1ME4a LINE L1 -476 5645 5389 769 271 149 23 chr2 80237708 80238103 -170449751 + LTR16A1 LTR ERVL 1 445 -12 231 214 171 0 chr2 80238544 80238614 -170449240 + LTR30 LTR ERV1 2 83 -639 416 155 62 143 chr2 80238617 80238778 -170449076 + LTR12 LTR ERV1 142 289 -425 274 200 46 100 chr2 80238778 80238908 -170448946 + LTR30 LTR ERV1 556 678 -44 305 258 45 0 chr2 80238908 80238974 -170448880 + LTR12 LTR ERV1 421 489 -225 1784 166 17 10 chr2 80239081 80239377 -170448477 - AluSx SINE Alu -14 298 1 27 49 0 0 chr2 80239480 80239521 -170448333 + AT_rich Low_complexity Low_complexity 1 41 0 345 319 95 25 chr2 80239654 80239895 -170447959 - L1ME4a LINE L1 -1319 4827 4570 202 115 39 58 chr2 80240148 80240200 -170447654 + T-rich Low_complexity Low_complexity 4 54 0 3302 235 55 20 chr2 80240257 80241337 -170446517 - L1M4 LINE L1 -1476 4670 3554 499 179 12 0 chr2 80241337 80241421 -170446433 - MLT1D LTR MaLR -389 116 32 209 303 15 0 chr2 80242833 80242899 -170444955 - L2 LINE L2 0 3313 3247 * 299 213 85 43 chr2 80242895 80242989 -170444865 + L2 LINE L2 3168 3265 -7 429 336 0 14 chr2 80243046 80243186 -170444668 + MIR SINE MIR 2 139 -123 282 207 73 107 chr2 80243841 80243991 -170443863 - MER53 DNA DNA -44 145 1 2486 139 28 13 chr2 80244038 80244433 -170443421 + MSTB LTR MaLR 1 401 -25 397 276 9 9 chr2 80244703 80244819 -170443035 - MIR SINE MIR -51 211 96 1671 200 25 14 chr2 80245895 80246255 -170441599 - MLT1A1 LTR MaLR -1 364 1 24 0 0 0 chr2 80246779 80246803 -170441051 + AT_rich Low_complexity Low_complexity 1 24 0 409 241 84 59 chr2 80246891 80247094 -170440760 + HAL1 LINE L1 4 211 -2296 246 277 15 0 chr2 80247109 80247174 -170440680 + HAL1 LINE L1 277 342 -2165 692 310 103 18 chr2 80247338 80247735 -170440119 + HAL1 LINE L1 499 929 -1578 238 243 18 18 chr2 80247770 80247881 -170439973 + (TA)n Simple_repeat Simple_repeat 1 111 0 32 57 0 0 chr2 80247886 80247939 -170439915 + AT_rich Low_complexity Low_complexity 1 53 0 190 275 38 12 chr2 80247939 80248019 -170439835 + MIR SINE MIR 181 262 0 195 339 188 31 chr2 80249067 80249259 -170438595 + L3 LINE CR1 1307 1528 -49 300 53 0 0 chr2 80250645 80250683 -170437171 + (T)n Simple_repeat Simple_repeat 1 38 0 220 206 0 41 chr2 80250785 80250858 -170436996 + A-rich Low_complexity Low_complexity 6 75 0 306 0 0 0 chr2 80251200 80251234 -170436620 + (TG)n Simple_repeat Simple_repeat 2 35 0 2039 76 0 26 chr2 80251234 80251498 -170436356 - AluSc SINE Alu -50 259 3 3080 209 44 73 chr2 80252435 80253804 -170434050 - L1MC3 LINE L1 -743 5403 4850 513 258 197 12 chr2 80253840 80254084 -170433770 + LTR50 LTR ERVL 476 764 -31 27 0 0 0 chr2 80254133 80254160 -170433694 + AT_rich Low_complexity Low_complexity 1 27 0 2377 116 166 108 chr2 80254649 80255505 -170432349 - pTR5 LTR ERV1 0 1523 49 407 318 37 54 chr2 80255857 80256206 -170431648 - L1M4 LINE L1 -2990 3156 2814 2024 267 103 48 chr2 80257127 80257518 -170430336 - MER69 DNA AcHobo -1343 1183 815 2090 122 6 3 chr2 80257518 80257829 -170430025 - AluSx SINE Alu 0 312 1 2024 267 103 48 chr2 80257829 80258316 -170429538 - MER69 DNA AcHobo -1711 815 256 655 248 190 26 chr2 80258324 80258740 -170429114 - Charlie4a DNA MER1_type -8 500 17 339 327 171 14 chr2 80258749 80258960 -170428894 - MER69 DNA AcHobo -2280 246 3 587 274 88 73 chr2 80259516 80259550 -170428304 + MLT1I LTR MaLR 87 119 -290 903 225 0 72 chr2 80259550 80259786 -170428068 + MER20 DNA MER1_type 1 219 0 587 274 88 73 chr2 80259786 80259937 -170427917 + MLT1I LTR MaLR 119 280 -129 1166 258 129 24 chr2 80259937 80260402 -170427452 - LTR40a LTR ERVL -3 516 3 587 274 88 73 chr2 80260402 80260489 -170427365 + MLT1I LTR MaLR 280 364 -45 22 0 0 0 chr2 80261177 80261199 -170426655 + AT_rich Low_complexity Low_complexity 1 22 0 260 252 103 78 chr2 80261836 80262078 -170425776 + MER112 DNA MER1_type 13 260 0 757 245 10 60 chr2 80262339 80262539 -170425315 - MER20 DNA MER1_type -27 192 3 774 105 0 0 chr2 80262950 80263064 -170424790 + (TTTC)n Simple_repeat Simple_repeat 1 114 0 207 346 77 0 chr2 80263075 80263153 -170424701 - L2 LINE L2 -52 3220 3137 1003 206 0 0 chr2 80264341 80264559 -170423295 - L1MA6 LINE L1 -12 6288 6071 21 0 0 0 chr2 80265120 80265141 -170422713 + AT_rich Low_complexity Low_complexity 1 21 0 375 299 31 16 chr2 80265192 80265319 -170422535 - MIR SINE MIR -129 133 5 1763 171 20 3 chr2 80265963 80266256 -170421598 + AluSx SINE Alu 1 298 -14 43641 41 0 8 chr2 80266319 80272518 -170415336 - L1PA3 LINE L1 -1 6154 2 600 242 68 12 chr2 80272518 80272770 -170415084 - LTR37B LTR ERV1 -5 463 198 21 71 0 0 chr2 80273071 80273113 -170414741 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr2 80273198 80273220 -170414634 + AT_rich Low_complexity Low_complexity 1 22 0 667 276 46 10 chr2 80273907 80274103 -170413751 + MLT1I LTR MaLR 205 407 -2 243 61 0 0 chr2 80274145 80274178 -170413676 + (A)n Simple_repeat Simple_repeat 1 33 0 928 238 5 5 chr2 80274199 80274388 -170413466 - MER5A DNA MER1_type 0 189 1 453 301 55 0 chr2 80275802 80275948 -170411906 - MIR SINE MIR -6 256 103 1874 246 102 53 chr2 80276847 80277541 -170410313 - MER21B LTR ERV1 -125 738 11 2716 138 28 19 chr2 80279570 80280040 -170407814 + MER31A LTR ERV1 5 478 -7 365 247 62 62 chr2 80280401 80280547 -170407307 - MLT1J2 LTR MaLR -299 147 2 243 0 0 0 chr2 80280686 80280713 -170407141 + (TG)n Simple_repeat Simple_repeat 2 28 0 186 71 0 0 chr2 80281046 80281074 -170406780 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1435 215 45 20 chr2 80281074 80281428 -170406426 - LTR52 LTR ERVL -58 363 1 2100 136 0 13 chr2 80281792 80282108 -170405746 - AluSx SINE Alu 0 312 1 2305 110 3 0 chr2 80282158 80282466 -170405388 - AluSp SINE Alu -4 309 1 800 174 62 46 chr2 80282493 80282688 -170405166 - L1MB1 LINE L1 -12 6156 5959 922 184 30 0 chr2 80283047 80283215 -170404639 + FAM SINE Alu 1 173 -12 332 311 45 15 chr2 80283222 80283354 -170404500 - L3 LINE CR1 -37 1540 1405 1633 128 51 25 chr2 80283461 80283735 -170404119 - MER4A LTR ERV1 0 664 384 528 135 42 21 chr2 80283785 80283881 -170403973 - MER4A LTR ERV1 -566 98 1 247 325 126 31 chr2 80283911 80284102 -170403752 + L2 LINE L2 2144 2352 -962 424 260 203 16 chr2 80284333 80284525 -170403329 + MIR SINE MIR 31 258 -4 190 350 25 50 chr2 80284759 80284879 -170402975 + L2 LINE L2 2762 2878 -436 216 240 20 0 chr2 80285119 80285169 -170402685 + L2 LINE L2 3263 3313 0 352 281 65 13 chr2 80285694 80285847 -170402007 + MER103 DNA DNA 3 163 -3 999 264 34 58 chr2 80286219 80286598 -170401256 + MLT1A2 LTR MaLR 1 370 -4 512 245 20 7 chr2 80287509 80287660 -170400194 + MER103 DNA DNA 8 160 -6 529 200 80 0 chr2 80287952 80288077 -170399777 + MER5A DNA MER1_type 1 135 -54 243 156 13 26 chr2 80288827 80288904 -170398950 + (TA)n Simple_repeat Simple_repeat 1 76 0 2734 26 0 0 chr2 80289585 80289893 -170397961 + AluY SINE Alu 1 308 -3 23 0 0 0 chr2 80290557 80290580 -170397274 + AT_rich Low_complexity Low_complexity 1 23 0 2754 87 5 16 chr2 80290628 80291007 -170396847 - THE1C LTR MaLR 0 375 1 26 64 0 0 chr2 80291195 80291242 -170396612 + AT_rich Low_complexity Low_complexity 1 47 0 326 269 129 16 chr2 80292656 80292849 -170395005 + L1MC4a LINE L1 5712 5926 -1882 21 57 0 0 chr2 80292849 80292884 -170394970 + AT_rich Low_complexity Low_complexity 1 35 0 834 254 172 18 chr2 80293412 80294030 -170393824 + LTR50 LTR ERVL 1 791 -4 490 226 72 51 chr2 80294120 80294315 -170393539 + LTR37B LTR ERV1 247 445 -23 499 217 122 42 chr2 80294370 80294559 -170393295 - MER112 DNA MER1_type -1 259 56 180 263 40 26 chr2 80295620 80295696 -170392158 - MIR3 SINE MIR -5 203 127 197 263 18 18 chr2 80296661 80296718 -170391136 + MIR SINE MIR 97 153 -109 1632 183 10 3 chr2 80298121 80298416 -170389438 - AluJo SINE Alu -1 311 15 243 333 50 35 chr2 80299856 80299997 -170387857 + MIR SINE MIR 49 191 -71 28 29 0 0 chr2 80300744 80300779 -170387075 + AT_rich Low_complexity Low_complexity 1 35 0 185 329 63 13 chr2 80300836 80300915 -170386939 - L2 LINE L2 -6 3266 3184 203 196 43 0 chr2 80301945 80301991 -170385863 + CT-rich Low_complexity Low_complexity 1 48 0 203 196 0 18 chr2 80303581 80303637 -170384217 + T-rich Low_complexity Low_complexity 1 55 0 360 0 0 0 chr2 80303863 80303903 -170383951 + (T)n Simple_repeat Simple_repeat 1 40 0 346 251 117 37 chr2 80304277 80304440 -170383414 + L1ME4a LINE L1 5946 6121 0 1839 103 71 7 chr2 80305202 80305483 -170382371 + AluSq SINE Alu 1 299 -14 509 121 0 64 chr2 80305486 80305627 -170382227 + (GAAA)n Simple_repeat Simple_repeat 1 132 0 2046 128 30 0 chr2 80305630 80305927 -170381927 + AluSg SINE Alu 1 306 -4 280 284 23 0 chr2 80306782 80306870 -170380984 + LTR43 LTR ERV1 224 313 -289 225 0 0 0 chr2 80306926 80306951 -170380903 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2026 116 3 35 chr2 80307415 80307726 -170380128 + AluSq SINE Alu 3 303 -10 303 295 55 51 chr2 80307974 80308228 -170379626 + L1MC/D LINE L1 5309 5563 -2245 843 86 0 0 chr2 80308499 80308616 -170379238 + (TA)n Simple_repeat Simple_repeat 2 118 0 872 328 102 13 chr2 80308730 80309282 -170378572 + L2 LINE L2 2696 3292 -21 228 297 188 0 chr2 80310762 80310826 -170377028 + MER45 DNA AcHobo 2 77 -963 225 0 0 0 chr2 80311667 80311692 -170376162 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 510 125 0 0 chr2 80311723 80311803 -170376051 + (TCC)n Simple_repeat Simple_repeat 3 82 0 1479 103 5 5 chr2 80311968 80312171 -170375683 + AluSq SINE Alu 94 296 -17 25 31 0 0 chr2 80312522 80312554 -170375300 + AT_rich Low_complexity Low_complexity 1 32 0 1675 165 118 21 chr2 80312744 80313168 -170374686 - L1MC3 LINE L1 -8 7777 7313 889 126 55 6 chr2 80313199 80313382 -170374472 + Tigger3(Golem) DNA MER2_type 2373 2564 -465 1326 207 88 6 chr2 80313434 80313753 -170374101 - MER2 DNA MER2_type 0 345 1 348 24 0 0 chr2 80313788 80313829 -170374025 + (CA)n Simple_repeat Simple_repeat 2 42 0 6419 31 0 1 chr2 80314372 80315133 -170372721 + L1PA2 LINE L1 5396 6155 0 8121 168 28 13 chr2 80315133 80317078 -170370776 + L1M2 LINE L1 3694 5669 -622 2278 220 51 24 chr2 80317115 80317660 -170370194 + MER68 LTR ERV1 3 562 0 232 126 11 46 chr2 80318084 80318171 -170369683 + (TA)n Simple_repeat Simple_repeat 1 84 0 26 98 0 0 chr2 80318189 80318271 -170369583 + AT_rich Low_complexity Low_complexity 1 82 0 1662 142 50 7 chr2 80319329 80319611 -170368243 + MER49 LTR ERV1 1 294 -629 236 290 0 16 chr2 80319617 80319679 -170368175 + MER4E LTR ERV1 105 165 -614 1260 278 3 17 chr2 80319690 80320050 -170367804 + MER4D LTR ERV1 549 903 0 28 86 0 0 chr2 80320488 80320558 -170367296 + AT_rich Low_complexity Low_complexity 1 70 0 438 318 49 58 chr2 80323034 80323399 -170364455 + L2 LINE L2 2885 3246 -67 1749 102 30 0 chr2 80324748 80324984 -170362870 - AluY SINE Alu -20 291 49 2075 100 0 11 chr2 80324985 80325266 -170362588 - AluSc SINE Alu -31 278 1 1567 139 0 4 chr2 80326040 80326278 -170361576 + AluSq SINE Alu 1 237 -76 1084 237 4 17 chr2 80326751 80326987 -170360867 - MER8 DNA MER2_type 0 239 7 447 192 144 41 chr2 80327035 80327181 -170360673 - MER96 DNA MER1_type? -9 166 6 25307 32 1 0 chr2 80328339 80332828 -170355026 + L1P1 LINE L1 1216 5709 -446 37507 42 71 1 chr2 80332939 80337783 -170350071 - L1P LINE L1 -961 5185 3 392 189 0 0 chr2 80337781 80337855 -170349999 - L1 LINE L1 -2444 3702 3629 * 740 128 45 23 chr2 80337854 80337987 -170349867 + L1M2 LINE L1 5647 5782 -509 275 231 0 13 chr2 80337987 80338065 -170349789 + (TATATG)n Simple_repeat Simple_repeat 3 79 0 609 256 25 6 chr2 80338165 80338325 -170349529 + MER5B DNA MER1_type 11 173 -5 649 197 0 0 chr2 80339913 80340030 -170347824 + FLAM_C SINE Alu 4 120 -23 1147 264 14 46 chr2 80340467 80340815 -170347039 + MLT1A2 LTR MaLR 3 339 -35 2775 220 48 141 chr2 80340850 80341053 -170346801 + MLT1A2-int LTR MaLR 1 221 -1150 382 188 0 0 chr2 80341053 80341117 -170346737 - MER20 DNA MER1_type -54 165 102 2775 220 48 141 chr2 80341117 80341582 -170346272 + MLT1A2-int LTR MaLR 221 727 -644 2376 84 0 0 chr2 80341582 80341892 -170345962 + AluY SINE Alu 1 310 -1 2775 220 48 141 chr2 80341892 80342668 -170345186 + MLT1A2-int LTR MaLR 727 1370 -1 891 231 54 94 chr2 80342677 80343027 -170344827 + MLT1B LTR MaLR 44 379 -11 774 296 73 62 chr2 80343726 80343942 -170343912 + LTR33 LTR ERVL 19 231 -290 937 190 46 37 chr2 80343942 80344158 -170343696 + MER20 DNA MER1_type 1 218 -1 774 296 73 62 chr2 80344158 80344437 -170343417 + LTR33 LTR ERVL 231 519 -2 640 268 21 16 chr2 80344538 80344728 -170343126 - MIR SINE MIR -2 260 70 217 333 11 0 chr2 80344913 80345003 -170342851 + CT-rich Low_complexity Low_complexity 2 92 0 200 200 0 0 chr2 80346754 80346794 -170341060 + A-rich Low_complexity Low_complexity 5 44 0 348 256 198 8 chr2 80346867 80346988 -170340866 + MER5A DNA MER1_type 46 189 0 540 235 44 0 chr2 80347142 80347278 -170340576 + MER5A DNA MER1_type 30 171 -18 213 121 0 0 chr2 80348875 80348908 -170338946 + (A)n Simple_repeat Simple_repeat 1 33 0 1574 188 45 28 chr2 80349259 80349616 -170338238 + MLT1A1 LTR MaLR 1 363 -2 469 176 42 42 chr2 80349780 80349899 -170337955 + MER67D LTR ERV1 26 144 -370 1164 152 116 16 chr2 80349902 80350152 -170337702 + MER44D DNA MER2_type 1 545 -64 644 140 0 0 chr2 80350142 80350235 -170337619 + 5S rRNA rRNA 1 93 -28 * 306 273 26 0 chr2 80350228 80350305 -170337549 + MER44D DNA MER2_type 527 605 0 * 1406 214 83 12 chr2 80350331 80350668 -170337186 + MER67D LTR ERV1 154 514 0 47 0 0 57 chr2 80350845 80350915 -170336939 + AT_rich Low_complexity Low_complexity 1 66 0 6054 149 33 14 chr2 80351217 80351412 -170336442 - Tigger2 DNA MER2_type -5 2713 2523 2159 109 0 22 chr2 80351412 80351723 -170336131 - AluSc SINE Alu -5 304 1 6054 149 33 14 chr2 80351723 80352565 -170335289 - Tigger2 DNA MER2_type -195 2523 1657 6855 65 134 2 chr2 80352665 80353656 -170334198 - L1P LINE L1 -5000 1146 25 4120 134 4 27 chr2 80353656 80354356 -170333498 - Tigger2 DNA MER2_type -1469 1249 566 1144 148 75 20 chr2 80354355 80354707 -170333147 - Tigger2 DNA MER2_type -2254 464 1 * 1027 152 49 5 chr2 80355266 80355470 -170332384 - L1MB3 LINE L1 0 6183 5971 350 67 0 0 chr2 80356256 80356301 -170331553 + Tigger2 DNA MER2_type 891 935 -1783 749 248 182 8 chr2 80359519 80359882 -170327972 + LTR37A LTR ERV1 1 426 0 181 239 56 42 chr2 80359883 80359954 -170327900 + MIR SINE MIR 191 262 0 285 268 37 0 chr2 80360825 80360907 -170326947 - MIR SINE MIR -110 152 68 255 273 30 106 chr2 80360991 80361123 -170326731 + MER91A DNA MER1_type 71 192 -4 659 261 133 0 chr2 80362287 80362490 -170325364 + MIR SINE MIR 31 260 -2 421 271 71 20 chr2 80364529 80364877 -170322977 - L1MEc LINE L1 -5960 436 34 394 261 9 18 chr2 80365194 80365305 -170322549 + MER58B DNA MER1_type 230 339 -2 645 257 28 14 chr2 80366559 80366773 -170321081 - MER20 DNA MER1_type 0 219 3 299 167 0 0 chr2 80367134 80367200 -170320654 - L1MA8 LINE L1 -5 6286 6221 288 120 40 0 chr2 80367274 80367324 -170320530 - MER2 DNA MER2_type -89 256 205 32 0 0 0 chr2 80367515 80367547 -170320307 + AT_rich Low_complexity Low_complexity 1 32 0 186 191 0 0 chr2 80367698 80367740 -170320114 + C-rich Low_complexity Low_complexity 1 42 0 369 0 0 0 chr2 80367791 80367832 -170320022 + (T)n Simple_repeat Simple_repeat 1 41 0 323 224 203 28 chr2 80368446 80368589 -170319265 - MIR SINE MIR -63 199 32 414 313 7 7 chr2 80370175 80370319 -170317535 - MIR SINE MIR -44 218 75 197 311 150 66 chr2 80370621 80371193 -170316661 + L2 LINE L2 1323 1942 -1372 185 0 40 0 chr2 80373761 80373786 -170314068 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1169 200 65 52 chr2 80374964 80375349 -170312505 + LTR37A LTR ERV1 4 393 -33 1839 334 53 33 chr2 80375967 80377135 -170310719 - L2 LINE L2 -15 3298 1736 205 314 67 48 chr2 80377296 80377401 -170310453 + MIR SINE MIR 48 154 -108 341 345 46 47 chr2 80379934 80380303 -170307551 + MER115 DNA AcHobo 35 439 -254 196 305 137 32 chr2 80380860 80380955 -170306899 - L3 LINE CR1 -1 1576 1472 339 25 0 0 chr2 80381477 80381517 -170306337 + (TG)n Simple_repeat Simple_repeat 2 41 0 28 29 0 0 chr2 80381586 80381621 -170306233 + AT_rich Low_complexity Low_complexity 1 35 0 229 250 0 0 chr2 80382139 80382187 -170305667 + (TG)n Simple_repeat Simple_repeat 1 48 0 207 0 0 0 chr2 80383424 80383447 -170304407 + (T)n Simple_repeat Simple_repeat 1 23 0 437 309 64 16 chr2 80384011 80384199 -170303655 - L2 LINE L2 -964 2350 2154 22 80 0 0 chr2 80384533 80384583 -170303271 + AT_rich Low_complexity Low_complexity 1 50 0 1938 116 0 34 chr2 80384977 80385320 -170302534 - AluSx SINE Alu 0 333 1 3977 33 8 0 chr2 80386920 80387430 -170300424 - L1P LINE L1 -2669 3477 2964 4399 33 0 0 chr2 80387430 80387966 -170299888 + L1PA3 LINE L1 5623 6159 0 290 347 53 0 chr2 80389791 80389886 -170297968 - L2 LINE L2 -1 3271 3172 5771 24 0 0 chr2 80390628 80391298 -170296556 + L1PA4 LINE L1 5483 6152 -3 1647 225 92 20 chr2 80391825 80392269 -170295585 + MLT2B1 LTR ERVL 1 476 -44 1347 133 27 9 chr2 80392309 80392534 -170295320 - Tigger5 DNA MER2_type -42 2281 2053 738 92 0 34 chr2 80392584 80392703 -170295151 - L1PA8 LINE L1 0 6172 6058 350 298 57 28 chr2 80393768 80393909 -170293945 + MIR3 SINE MIR 21 165 -43 180 0 0 0 chr2 80393981 80394001 -170293853 + (T)n Simple_repeat Simple_repeat 1 20 0 242 301 11 11 chr2 80394279 80394372 -170293482 - MIR SINE MIR -4 258 166 281 198 10 146 chr2 80396743 80396839 -170291015 + MER63 DNA MER1_type 33 741 -95 781 267 93 78 chr2 80396945 80397458 -170290396 - L2 LINE L2 -9 3304 2791 2105 138 0 0 chr2 80398220 80398532 -170289322 + AluSx SINE Alu 1 312 0 418 320 101 40 chr2 80398599 80398996 -170288858 + L1ME4a LINE L1 5483 5903 -218 233 255 19 47 chr2 80399060 80399166 -170288688 + L1ME4a LINE L1 6018 6120 -1 21 36 0 0 chr2 80399235 80399263 -170288591 + AT_rich Low_complexity Low_complexity 1 28 0 1937 151 40 117 chr2 80399277 80399527 -170288327 + Tigger2a DNA MER2_type 1 200 -2508 216 24 48 24 chr2 80399527 80399569 -170288285 + (TA)n Simple_repeat Simple_repeat 2 44 0 1937 151 40 117 chr2 80399569 80399788 -170288066 + Tigger2a DNA MER2_type 200 434 0 1162 252 19 78 chr2 80400311 80400723 -170287131 + MLT2B1 LTR ERVL 1 388 -132 637 320 40 8 chr2 80401412 80401659 -170286195 + MIR SINE MIR 8 262 0 201 337 10 41 chr2 80401685 80401783 -170286071 - MIR SINE MIR -79 129 35 234 91 0 0 chr2 80402776 80402809 -170285045 + (TG)n Simple_repeat Simple_repeat 2 34 0 21 36 0 0 chr2 80403097 80403125 -170284729 + AT_rich Low_complexity Low_complexity 1 28 0 207 211 0 0 chr2 80404849 80404887 -170282967 + (CA)n Simple_repeat Simple_repeat 1 38 0 264 320 64 24 chr2 80405694 80405819 -170282035 - MIR SINE MIR -123 139 10 710 354 97 20 chr2 80406213 80406601 -170281253 + L3 LINE CR1 1090 1447 -130 2270 90 3 10 chr2 80406601 80406902 -170280952 + AluSp SINE Alu 1 299 -14 710 354 97 20 chr2 80406902 80406945 -170280909 + L3 LINE CR1 1447 1485 -92 1467 151 7 61 chr2 80406945 80407224 -170280630 - AluJb SINE Alu -11 301 38 1512 72 3 6 chr2 80408926 80409108 -170278746 - L1ME LINE L1 -363 5799 5620 2651 76 8 3 chr2 80409108 80409464 -170278390 + L1PA8 LINE L1 5806 6163 -9 1512 72 3 6 chr2 80409464 80409499 -170278355 - L1ME LINE L1 -542 5620 5586 2368 82 0 0 chr2 80411254 80411548 -170276306 + AluSc SINE Alu 1 294 -15 34 72 0 0 chr2 80412057 80412126 -170275728 + AT_rich Low_complexity Low_complexity 1 69 0 183 267 140 40 chr2 80412267 80412417 -170275437 - L3 LINE CR1 -1291 286 122 205 235 102 41 chr2 80413508 80413606 -170274248 - MIR3 SINE MIR -39 169 66 1809 257 63 46 chr2 80413779 80414362 -170273492 + MLT1E LTR MaLR 1 593 0 2045 194 28 28 chr2 80414900 80415332 -170272522 + MSTB1 LTR MaLR 1 432 0 549 187 24 12 chr2 80415594 80415760 -170272094 + (TA)n Simple_repeat Simple_repeat 1 168 0 298 383 52 62 chr2 80416329 80416697 -170271157 + L2 LINE L2 2907 3270 -2 476 299 29 29 chr2 80416738 80416979 -170270875 - L1ME4a LINE L1 -256 5865 5625 203 234 215 37 chr2 80419130 80419237 -170268617 - MER5C DNA MER1_type -190 134 9 257 308 0 27 chr2 80419993 80420139 -170267715 + HAL1 LINE L1 1132 1273 -1234 12758 160 29 14 chr2 80420158 80420808 -170267046 + Tigger1 DNA MER2_type 4 643 -1775 1846 131 0 39 chr2 80420808 80421114 -170266740 + AluSx SINE Alu 2 295 -17 12758 160 29 14 chr2 80421114 80422840 -170265014 + Tigger1 DNA MER2_type 643 2415 -3 339 270 70 60 chr2 80423052 80423137 -170264717 + HAL1 LINE L1 1482 1565 -942 1591 137 63 13 chr2 80423137 80423452 -170264402 + L1MA5A LINE L1 5961 6291 -6 339 270 70 60 chr2 80423452 80423551 -170264303 + HAL1 LINE L1 1565 1668 -839 25 0 0 0 chr2 80424536 80424561 -170263293 + AT_rich Low_complexity Low_complexity 1 25 0 1033 197 0 58 chr2 80424635 80424843 -170263011 + AluJo SINE Alu 1 196 -116 280 304 80 36 chr2 80425460 80425598 -170262256 + L2 LINE L2 3161 3304 -9 1144 174 68 9 chr2 80426112 80426331 -170261523 - AluJo SINE Alu -80 232 1 420 284 66 38 chr2 80426367 80426550 -170261304 - MIR SINE MIR -15 247 60 436 278 137 17 chr2 80426918 80427152 -170260702 + L1ME LINE L1 5554 5815 -306 205 313 240 0 chr2 80427522 80427618 -170260236 + L2 LINE L2 3148 3266 -6 2479 43 0 10 chr2 80427688 80427990 -170259864 - AluY SINE Alu -12 299 1 423 353 97 23 chr2 80428706 80429394 -170258460 + L1M4 LINE L1 4129 4867 -1279 182 88 0 29 chr2 80429715 80429749 -170258105 + (TA)n Simple_repeat Simple_repeat 2 34 0 267 186 8 42 chr2 80429794 80429912 -170257942 + (TA)n Simple_repeat Simple_repeat 2 115 0 232 192 0 0 chr2 80430265 80430317 -170257537 + L1MC4 LINE L1 6649 6700 -1342 203 204 19 0 chr2 80430326 80430380 -170257474 + (TA)n Simple_repeat Simple_repeat 1 55 0 23 33 0 0 chr2 80430857 80430887 -170256967 + AT_rich Low_complexity Low_complexity 1 30 0 245 98 24 0 chr2 80432038 80432079 -170255775 + (GA)n Simple_repeat Simple_repeat 2 43 0 217 247 11 65 chr2 80432428 80432521 -170255333 - MIR SINE MIR -115 93 6 362 303 46 6 chr2 80433833 80434008 -170253846 + L1M4 LINE L1 4877 5058 -1088 25 31 0 0 chr2 80434311 80434343 -170253511 + AT_rich Low_complexity Low_complexity 1 32 0 35 41 0 0 chr2 80435636 80435685 -170252169 + AT_rich Low_complexity Low_complexity 1 49 0 268 382 26 13 chr2 80436333 80436485 -170251369 + L3 LINE CR1 1323 1476 -101 22 70 0 0 chr2 80437214 80437257 -170250597 + AT_rich Low_complexity Low_complexity 1 43 0 231 61 0 0 chr2 80438428 80438461 -170249393 + (CA)n Simple_repeat Simple_repeat 1 33 0 872 113 0 0 chr2 80440669 80440802 -170247052 + AluSp/q SINE Alu 174 306 -7 21 57 0 0 chr2 80441014 80441049 -170246805 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr2 80441056 80441098 -170246756 + AT_rich Low_complexity Low_complexity 1 42 0 837 312 128 19 chr2 80441419 80441537 -170246317 - L2 LINE L2 -4 3309 3205 360 0 0 0 chr2 80441537 80441577 -170246277 + (CA)n Simple_repeat Simple_repeat 1 40 0 837 312 128 19 chr2 80441577 80441881 -170245973 - L2 LINE L2 -108 3205 2841 207 338 38 0 chr2 80442024 80442104 -170245750 + L2 LINE L2 3187 3269 -44 1830 159 0 17 chr2 80442172 80442462 -170245392 + AluSx SINE Alu 3 287 -25 254 299 203 0 chr2 80442620 80442807 -170245047 + L2 LINE L2 3089 3313 0 407 270 66 24 chr2 80442845 80443056 -170244798 + L1ME4a LINE L1 5666 5885 -236 2836 94 5 21 chr2 80443258 80443685 -170244169 - L1PA10 LINE L1 -1 6167 5748 254 266 18 64 chr2 80444126 80444235 -170243619 - MLT1E2 LTR MaLR -517 109 6 21 71 0 0 chr2 80444544 80444586 -170243268 + AT_rich Low_complexity Low_complexity 1 42 0 935 107 0 0 chr2 80445313 80445435 -170242419 + AluY SINE Alu 1 122 -189 217 119 30 75 chr2 80445436 80445478 -170242376 + A-rich Low_complexity Low_complexity 3 42 -24 2079 133 0 0 chr2 80445478 80445786 -170242068 + AluY SINE Alu 1 308 -3 217 119 30 75 chr2 80445786 80445810 -170242044 + A-rich Low_complexity Low_complexity 42 66 0 181 288 0 55 chr2 80445858 80445931 -170241923 + L3 LINE CR1 757 825 -752 195 274 129 24 chr2 80446242 80446366 -170241488 - MIR SINE MIR -51 211 75 187 270 0 40 chr2 80447020 80447094 -170240760 + MIR SINE MIR 149 219 -43 769 43 0 0 chr2 80447105 80447197 -170240657 + L1PA3 LINE L1 1 92 -6054 38699 36 2 2 chr2 80447197 80452735 -170235119 + L1PA3 LINE L1 617 6155 0 295 202 22 0 chr2 80453848 80453937 -170233917 + GA-rich Low_complexity Low_complexity 2 92 0 315 113 0 0 chr2 80454042 80454095 -170233759 + (TG)n Simple_repeat Simple_repeat 2 54 0 1985 74 37 0 chr2 80454172 80454443 -170233411 - AluY SINE Alu -30 281 1 367 313 90 57 chr2 80454567 80454836 -170233018 - L1ME LINE L1 -316 5805 5521 2160 147 56 7 chr2 80454836 80455244 -170232610 + MSTA LTR MaLR 1 428 0 367 313 90 57 chr2 80455244 80455306 -170232548 - L1ME LINE L1 -600 5521 5463 1984 146 3 0 chr2 80455768 80456063 -170231791 - AluSx SINE Alu -16 296 1 39 68 0 0 chr2 80456204 80456278 -170231576 + AT_rich Low_complexity Low_complexity 1 74 0 22 0 0 0 chr2 80456478 80456500 -170231354 + AT_rich Low_complexity Low_complexity 1 22 0 312 313 19 44 chr2 80458228 80458388 -170229466 + HAL1 LINE L1 1112 1267 -1240 1338 66 16 11 chr2 80458453 80458636 -170229218 + AluY SINE Alu 126 309 -2 21 0 0 0 chr2 80458988 80459009 -170228845 + AT_rich Low_complexity Low_complexity 1 21 0 825 318 18 0 chr2 80459290 80459510 -170228344 - MER58A DNA MER1_type 0 224 1 239 213 213 66 chr2 80460895 80461017 -170226837 + MLT1J LTR MaLR 37 176 -335 1781 224 38 102 chr2 80461112 80461740 -170226114 - MER77 LTR ERV1 -15 590 3 309 257 38 86 chr2 80461740 80461837 -170226017 + MLT1L LTR MaLR 329 420 -195 22 0 0 0 chr2 80463045 80463067 -170224787 + AT_rich Low_complexity Low_complexity 1 22 0 2896 190 138 77 chr2 80463127 80463683 -170224171 - L1MC3 LINE L1 -22 7763 7242 269 306 0 0 chr2 80463683 80463755 -170224099 - MLT1F1 LTR MaLR -443 124 53 2896 190 138 77 chr2 80463755 80464126 -170223728 - L1MC3 LINE L1 -543 7242 6704 2286 211 38 15 chr2 80464117 80464403 -170223451 + L1MA9 LINE L1 5636 5941 -371 * 1687 154 164 29 chr2 80464403 80464780 -170223074 - MSTA LTR MaLR 0 428 1 2286 211 38 15 chr2 80464780 80465020 -170222834 + L1MA9 LINE L1 5941 6174 -138 21 0 0 0 chr2 80465166 80465187 -170222667 + AT_rich Low_complexity Low_complexity 1 21 0 950 167 0 6 chr2 80465501 80465669 -170222185 - MER63 DNA MER1_type 0 1062 896 243 248 62 18 chr2 80465735 80465848 -170222006 - L1MC5 LINE L1 -50 7911 7794 180 77 0 0 chr2 80466983 80467009 -170220845 + (CA)n Simple_repeat Simple_repeat 2 27 0 342 286 38 0 chr2 80467191 80467296 -170220558 + MLT1E LTR MaLR 55 163 -430 * 1791 251 82 8 chr2 80467264 80467775 -170220079 + MLT1E1 LTR MaLR 104 652 -2 1538 211 79 8 chr2 80468704 80469073 -170218781 + MSTD LTR MaLR 1 395 -1 251 240 71 58 chr2 80469691 80469875 -170217979 + MLT1L LTR MaLR 401 613 -2 181 222 0 0 chr2 80470313 80470349 -170217505 + L2 LINE L2 3270 3305 -8 21 36 0 0 chr2 80471084 80471112 -170216742 + AT_rich Low_complexity Low_complexity 1 28 0 459 266 105 0 chr2 80471559 80471683 -170216171 + MER58B DNA MER1_type 202 338 -3 315 0 0 0 chr2 80472148 80472183 -170215671 + (TG)n Simple_repeat Simple_repeat 2 36 0 251 321 119 15 chr2 80472868 80473002 -170214852 + MIR SINE MIR 2 149 -113 274 294 18 9 chr2 80474884 80474993 -170212861 + (TA)n Simple_repeat Simple_repeat 1 110 0 986 32 0 32 chr2 80475060 80475185 -170212669 - L1PA7 LINE L1 -4 6150 6030 928 245 0 19 chr2 80476719 80476931 -170210923 + MER63A DNA MER1_type 2 209 -1 263 231 0 0 chr2 80476964 80477016 -170210838 + L2 LINE L2 3218 3269 -3 5271 86 16 0 chr2 80477457 80478194 -170209660 - L1P LINE L1 -1383 4763 4015 4881 59 5 0 chr2 80478194 80478814 -170209040 + L1PA7 LINE L1 5529 6154 0 2371 83 3 3 chr2 80478888 80479200 -170208654 + AluSx SINE Alu 1 312 0 1881 99 11 7 chr2 80479808 80480081 -170207773 - AluSg SINE Alu -36 274 1 23 0 0 0 chr2 80480084 80480107 -170207747 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr2 80480599 80480635 -170207219 + AT_rich Low_complexity Low_complexity 1 36 0 435 333 145 16 chr2 80481385 80481703 -170206151 - MLT1J2 LTR MaLR 0 450 92 4188 139 4 0 chr2 80482194 80482871 -170204983 + L1PA13 LINE L1 5482 6161 -2 22 0 0 0 chr2 80483521 80483543 -170204311 + AT_rich Low_complexity Low_complexity 1 22 0 6511 78 17 0 chr2 80483543 80484575 -170203279 - L1PA7 LINE L1 -13 6141 5103 261 0 0 0 chr2 80484892 80484921 -170202933 + (TG)n Simple_repeat Simple_repeat 2 30 0 447 294 7 65 chr2 80485304 80485457 -170202397 - MER5B DNA MER1_type -2 176 33 1519 91 5 0 chr2 80485457 80485666 -170202188 + AluY SINE Alu 88 297 -14 197 239 43 0 chr2 80485675 80485721 -170202133 + MER5B DNA MER1_type 130 177 -1 435 358 78 44 chr2 80485842 80486250 -170201604 + L2 LINE L2 2267 2688 -626 348 365 94 58 chr2 80486332 80486746 -170201108 + L2 LINE L2 2844 3272 0 228 67 0 0 chr2 80487970 80488000 -170199854 + (TG)n Simple_repeat Simple_repeat 2 31 0 274 315 63 42 chr2 80489481 80489624 -170198230 - MIR SINE MIR -70 192 47 24 32 0 0 chr2 80489696 80489727 -170198127 + AT_rich Low_complexity Low_complexity 1 31 0 274 336 31 31 chr2 80491669 80491797 -170196057 - L2 LINE L2 -186 3086 2959 3816 61 8 0 chr2 80493836 80494330 -170193524 - L1PA8 LINE L1 -6 6166 5669 392 241 45 0 chr2 80494349 80494461 -170193393 - L1 LINE L1 -1880 4266 4150 4473 166 70 5 chr2 80494462 80495382 -170192472 + L1PA16 LINE L1 5191 6166 0 308 374 26 18 chr2 80495442 80495669 -170192185 + L1M3c LINE L1 177 405 -5908 264 314 21 36 chr2 80495942 80496082 -170191772 + L1M3c LINE L1 669 806 -5497 2339 256 124 41 chr2 80496252 80497775 -170190079 + L1M3c LINE L1 802 2325 -4059 1357 230 31 31 chr2 80497777 80498134 -170189720 + MLT1A1 LTR MaLR 7 363 -2 629 253 22 39 chr2 80498135 80498389 -170189465 + L1MEc LINE L1 2179 2403 -3812 * 2341 223 46 29 chr2 80498387 80499184 -170188670 + L1MEc LINE L1 2781 3591 -2624 2018 215 37 0 chr2 80499182 80499637 -170188217 + L1MB1 LINE L1 5694 6165 -3 * 294 206 0 0 chr2 80500106 80500174 -170187680 + (TATATG)n Simple_repeat Simple_repeat 5 72 0 326 235 59 0 chr2 80502020 80502122 -170185732 - MER97c DNA MER1_type? -911 179 72 25 90 0 0 chr2 80502548 80502615 -170185239 + AT_rich Low_complexity Low_complexity 1 67 0 22 56 0 0 chr2 80503182 80503218 -170184636 + AT_rich Low_complexity Low_complexity 1 36 0 239 389 30 18 chr2 80503826 80503993 -170183861 + MIR3 SINE MIR 30 198 -10 36 94 0 0 chr2 80504819 80504925 -170182929 + AT_rich Low_complexity Low_complexity 1 106 0 276 269 52 7 chr2 80505629 80505788 -170182066 + L1P5 LINE L1 5299 5443 -711 35 24 0 0 chr2 80506082 80506124 -170181730 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr2 80506151 80506180 -170181674 + AT_rich Low_complexity Low_complexity 1 29 0 2406 251 68 22 chr2 80506829 80507684 -170180170 + L1M3c LINE L1 3252 4145 -2237 355 331 6 19 chr2 80508427 80508584 -170179270 + GA-rich Low_complexity Low_complexity 1 155 0 229 385 37 0 chr2 80510083 80510192 -170177662 + L2 LINE L2 3143 3255 -17 230 95 0 0 chr2 80510563 80510605 -170177249 - LTR66 LTR ERVL -171 439 398 204 97 0 0 chr2 80510682 80510713 -170177141 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 257 130 0 22 chr2 80511751 80511797 -170176057 + MADE1 DNA Mariner 36 80 0 209 269 0 0 chr2 80511884 80511936 -170175918 + (ATG)n Simple_repeat Simple_repeat 2 53 0 376 323 23 0 chr2 80512189 80512319 -170175535 - MIR3 SINE MIR -11 197 65 537 273 62 28 chr2 80513401 80513577 -170174277 + MER5A DNA MER1_type 6 187 -2 2020 124 3 16 chr2 80514630 80514937 -170172917 - AluSg SINE Alu -7 303 1 23 0 0 0 chr2 80515502 80515525 -170172329 + AT_rich Low_complexity Low_complexity 1 23 0 918 125 0 0 chr2 80516349 80516493 -170171361 + (TA)n Simple_repeat Simple_repeat 2 145 0 212 54 54 0 chr2 80517279 80517316 -170170538 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 257 0 30 0 chr2 80517621 80517654 -170170200 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 292 270 69 53 chr2 80518720 80518884 -170168970 + L2 LINE L2 2035 2204 -1110 1673 162 56 0 chr2 80518884 80519205 -170168649 + L1MA5 LINE L1 5961 6299 -1 292 270 69 53 chr2 80519205 80519229 -170168625 + L2 LINE L2 2204 2226 -1088 217 222 0 0 chr2 80519229 80519274 -170168580 + (TG)n Simple_repeat Simple_repeat 2 46 0 279 0 0 0 chr2 80521914 80521945 -170165909 + (TAGA)n Simple_repeat Simple_repeat 3 33 0 22 70 0 0 chr2 80522626 80522669 -170165185 + AT_rich Low_complexity Low_complexity 1 43 0 184 293 116 41 chr2 80523368 80523515 -170164339 - L2 LINE L2 -1 3312 3155 1557 181 17 3 chr2 80523714 80524007 -170163847 - AluJo SINE Alu -15 297 1 23 33 0 0 chr2 80524674 80524704 -170163150 + AT_rich Low_complexity Low_complexity 1 30 0 2149 144 25 0 chr2 80525517 80525871 -170161983 + THE1B LTR MaLR 2 364 0 28 0 0 0 chr2 80526466 80526494 -170161360 + AT_rich Low_complexity Low_complexity 1 28 0 357 332 63 16 chr2 80526783 80527037 -170160817 + MLT1J LTR MaLR 235 609 -6 902 307 10 29 chr2 80528798 80529104 -170158750 + MLT1K LTR MaLR 289 588 0 22 35 0 0 chr2 80529379 80529408 -170158446 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr2 80529533 80529563 -170158291 + AT_rich Low_complexity Low_complexity 1 30 0 256 333 0 0 chr2 80529634 80529730 -170158124 + Charlie7 DNA MER1_type 1 96 -2516 261 264 69 11 chr2 80530061 80530148 -170157706 - MLT1I LTR MaLR -315 94 3 203 302 182 13 chr2 80531755 80531914 -170155940 + MIR SINE MIR 3 188 -74 357 304 9 9 chr2 80532238 80532353 -170155501 + LTR40c LTR ERVL 5 119 -346 9364 221 19 6 chr2 80532454 80536492 -170151362 + L1PA16 LINE L1 2771 6860 -9 38 51 0 0 chr2 80536492 80536551 -170151303 + AT_rich Low_complexity Low_complexity 1 59 0 1075 240 18 29 chr2 80536561 80536840 -170151014 + LTR40b LTR ERVL 187 462 0 606 249 59 27 chr2 80539902 80540123 -170147731 + Charlie3 DNA MER1_type 1 228 -2482 2635 130 21 9 chr2 80540248 80540671 -170147183 + MER1A DNA MER1_type 102 529 0 278 326 10 20 chr2 80540998 80541096 -170146758 + MER5A DNA MER1_type 93 189 0 207 119 0 48 chr2 80541514 80541556 -170146298 + (TTG)n Simple_repeat Simple_repeat 1 40 0 382 346 44 6 chr2 80544911 80545093 -170142761 + L2 LINE L2 2554 2742 -572 330 288 88 86 chr2 80545070 80545525 -170142329 + L2 LINE L2 2846 3301 -12 * 643 250 47 90 chr2 80545749 80545795 -170142059 - MIR SINE MIR 0 262 216 2211 147 19 8 chr2 80545795 80546155 -170141699 + THE1B LTR MaLR 1 364 0 9158 135 63 5 chr2 80546155 80547594 -170140260 + THE1B-int LTR MaLR 1 1532 -48 2092 135 0 0 chr2 80547594 80547897 -170139957 - AluSg SINE Alu -7 303 1 9158 135 63 5 chr2 80547897 80547950 -170139904 + THE1B-int LTR MaLR 1532 1580 0 2320 124 31 6 chr2 80547950 80548305 -170139549 + THE1B LTR MaLR 1 364 0 643 250 47 90 chr2 80548305 80548512 -170139342 - MIR SINE MIR -43 219 18 189 214 0 0 chr2 80549608 80549650 -170138204 + (TA)n Simple_repeat Simple_repeat 2 43 0 180 111 0 0 chr2 80551390 80551417 -170136437 + (A)n Simple_repeat Simple_repeat 1 27 0 3048 179 28 5 chr2 80552453 80552956 -170134898 - L1MA8 LINE L1 0 6291 5770 423 0 0 0 chr2 80552956 80553003 -170134851 + (CA)n Simple_repeat Simple_repeat 2 48 0 3048 179 28 5 chr2 80553003 80553118 -170134736 - L1MA8 LINE L1 -521 5770 5659 247 319 55 11 chr2 80553150 80553241 -170134613 + L2 LINE L2 3178 3272 0 910 214 91 11 chr2 80553559 80553834 -170134020 - MER33 DNA MER1_type -22 302 6 459 0 0 0 chr2 80553988 80554039 -170133815 + (TG)n Simple_repeat Simple_repeat 2 52 0 736 313 38 12 chr2 80554407 80554647 -170133207 - MLT2F LTR ERVL -417 246 1 216 300 107 79 chr2 80555062 80555202 -170132652 - MIR3 SINE MIR -7 201 58 259 241 17 0 chr2 80556332 80556390 -170131464 + MIR SINE MIR 92 150 -112 28 0 0 0 chr2 80556783 80556811 -170131043 + AT_rich Low_complexity Low_complexity 1 28 0 21 26 0 26 chr2 80556964 80556990 -170130864 + AT_rich Low_complexity Low_complexity 1 27 -11 2180 116 0 0 chr2 80556990 80557284 -170130570 + AluSx SINE Alu 1 294 -18 21 26 0 26 chr2 80557284 80557296 -170130558 + AT_rich Low_complexity Low_complexity 27 38 0 926 237 74 64 chr2 80557378 80557770 -170130084 + MLT2C1 LTR ERVL 2 397 0 2033 105 40 0 chr2 80557785 80558083 -170129771 - AluSg SINE Alu 0 310 2 1551 122 140 11 chr2 80558296 80558567 -170129287 + AluSg SINE Alu 1 306 -4 2093 106 3 3 chr2 80558568 80558861 -170128993 + AluSc SINE Alu 3 295 -14 25 0 0 0 chr2 80560427 80560452 -170127402 + AT_rich Low_complexity Low_complexity 1 25 0 207 0 0 0 chr2 80561715 80561738 -170126116 + (A)n Simple_repeat Simple_repeat 1 23 0 584 265 71 40 chr2 80561823 80562076 -170125778 + MIR SINE MIR 2 262 0 281 284 11 21 chr2 80562238 80562333 -170125521 + MLT-int LTR MaLR 2 95 -1640 549 100 0 0 chr2 80562801 80562881 -170124973 - MADE1 DNA Mariner 0 80 1 338 38 0 38 chr2 80563556 80563609 -170124245 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1633 158 8 29 chr2 80564272 80564465 -170123389 - L1MA9 LINE L1 -42 6270 6075 2293 108 14 8 chr2 80564465 80564818 -170123036 - THE1A LTR MaLR 0 355 1 11097 98 23 3 chr2 80564818 80566366 -170121488 - THE1A-int LTR MaLR 0 1580 1 1972 147 20 14 chr2 80566366 80566719 -170121135 - THE1A LTR MaLR 0 355 1 1633 158 8 29 chr2 80566719 80566908 -170120946 - L1MA9 LINE L1 -234 6078 5795 502 329 128 0 chr2 80568666 80568885 -170118969 - MIR SINE MIR 0 262 16 21 57 0 0 chr2 80569048 80569083 -170118771 + AT_rich Low_complexity Low_complexity 1 35 0 2070 92 0 11 chr2 80571215 80571496 -170116358 + AluY SINE Alu 1 278 -33 180 0 0 0 chr2 80571496 80571516 -170116338 + (CA)n Simple_repeat Simple_repeat 1 20 0 298 0 48 0 chr2 80571517 80571559 -170116295 + (TA)n Simple_repeat Simple_repeat 2 45 0 1239 126 75 26 chr2 80571644 80572091 -170115763 - MLT2A2 LTR ERVL 0 453 1 2144 98 3 7 chr2 80572615 80572910 -170114944 + AluY SINE Alu 1 294 -17 238 296 34 57 chr2 80573192 80573368 -170114486 - L1ME LINE L1 -458 5663 5492 722 308 64 82 chr2 80574030 80575014 -170112840 + L2 LINE L2 2116 3313 0 26 30 0 0 chr2 80576534 80576567 -170111287 + AT_rich Low_complexity Low_complexity 1 33 0 247 312 102 13 chr2 80576648 80576805 -170111049 - L1ME3A LINE L1 -11 6159 5989 1481 264 47 27 chr2 80576936 80577490 -170110364 - L1MC5 LINE L1 -435 7526 6962 969 233 61 0 chr2 80577514 80577534 -170110320 - L1MD1 LINE L1 -12 6230 6213 1258 36 84 0 chr2 80577534 80577701 -170110153 - L1PA5 LINE L1 -7 6147 5967 969 233 61 0 chr2 80577701 80577724 -170110130 - L1MD1 LINE L1 -29 6213 6193 243 0 0 0 chr2 80577724 80577751 -170110103 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 969 233 61 0 chr2 80577751 80577985 -170109869 - L1MD1 LINE L1 -49 6193 5935 1004 196 46 5 chr2 80578056 80578275 -170109579 - L1MD1 LINE L1 -290 5952 5725 26 50 0 0 chr2 80578695 80578735 -170109119 + AT_rich Low_complexity Low_complexity 1 40 0 219 114 0 0 chr2 80580182 80580217 -170107637 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 80581540 80581561 -170106293 + AT_rich Low_complexity Low_complexity 1 21 0 36 0 0 0 chr2 80582370 80582406 -170105448 + AT_rich Low_complexity Low_complexity 1 36 0 5313 169 47 8 chr2 80583255 80584245 -170103609 - L1MA6 LINE L1 0 6300 5269 563 100 0 0 chr2 80584245 80584325 -170103529 - MADE1 DNA Mariner 0 80 1 5313 169 47 8 chr2 80584325 80584342 -170103512 - L1MA6 LINE L1 -1031 5269 5254 235 178 0 0 chr2 80584341 80584386 -170103468 + L1 LINE L1 4634 4678 -1468 * 1170 242 43 41 chr2 80584430 80584894 -170102960 + L1MC4 LINE L1 7590 7995 0 24 0 0 0 chr2 80586723 80586747 -170101107 + AT_rich Low_complexity Low_complexity 1 24 0 195 69 0 0 chr2 80587005 80587034 -170100820 + (TG)n Simple_repeat Simple_repeat 1 29 0 234 205 36 0 chr2 80587092 80587175 -170100679 + (CATA)n Simple_repeat Simple_repeat 2 87 0 309 289 10 0 chr2 80587202 80587299 -170100555 + (TA)n Simple_repeat Simple_repeat 1 98 0 253 217 72 24 chr2 80587317 80587400 -170100454 + L1MC4 LINE L1 6617 6703 -1339 273 303 28 45 chr2 80587695 80587873 -170099981 - L1MC5 LINE L1 -54 7907 7733 1952 142 64 26 chr2 80587943 80588288 -170099566 + THE1B LTR MaLR 7 364 0 442 287 78 31 chr2 80588293 80588652 -170099202 - L1MC5 LINE L1 -311 7650 7275 2299 184 35 22 chr2 80589804 80590265 -170097589 - MLT1C LTR MaLR 0 467 1 393 143 0 133 chr2 80590301 80590406 -170097448 - MER20 DNA MER1_type -1 218 128 213 196 0 0 chr2 80590665 80590711 -170097143 + (TATG)n Simple_repeat Simple_repeat 3 48 0 4917 177 38 19 chr2 80591095 80591586 -170096268 - L1MA5 LINE L1 -2 6298 5818 324 0 0 0 chr2 80591586 80591622 -170096232 + (TA)n Simple_repeat Simple_repeat 1 36 0 4917 177 38 19 chr2 80591622 80592340 -170095514 - L1MA5 LINE L1 -482 5818 5069 525 329 25 32 chr2 80592528 80592805 -170095049 + Charlie8 DNA MER1_type 1 275 -2142 458 299 75 0 chr2 80593169 80593343 -170094511 + MIR SINE MIR 74 260 -2 971 240 18 9 chr2 80593518 80593735 -170094119 + MER20 DNA MER1_type 1 219 0 27 0 0 0 chr2 80594460 80594487 -170093367 + AT_rich Low_complexity Low_complexity 1 27 0 2145 99 3 40 chr2 80594609 80594931 -170092923 - AluSq SINE Alu -3 310 1 238 284 15 0 chr2 80596549 80596616 -170091238 + MIR SINE MIR 116 183 -79 7052 23 0 0 chr2 80597838 80598658 -170089196 + L1PA3 LINE L1 5328 6147 -8 21 0 0 0 chr2 80598773 80598794 -170089060 + AT_rich Low_complexity Low_complexity 1 21 0 823 219 117 0 chr2 80599398 80599594 -170088260 + MER58A DNA MER1_type 2 220 -4 329 274 166 32 chr2 80600069 80600226 -170087628 + MER5B DNA MER1_type 1 178 0 206 125 0 25 chr2 80600935 80600975 -170086879 + (TTTC)n Simple_repeat Simple_repeat 3 41 0 457 239 88 0 chr2 80602468 80602581 -170085273 + MER58 DNA MER1_type 1 123 -263 265 317 85 49 chr2 80603111 80603335 -170084519 + MIR SINE MIR 1 232 -30 283 305 6 96 chr2 80603472 80603667 -170084187 + MIR SINE MIR 18 197 -63 186 43 0 0 chr2 80605131 80605154 -170082700 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 2251 83 0 17 chr2 80605417 80605719 -170082135 - AluSg SINE Alu -13 297 1 22 80 0 0 chr2 80606230 80606280 -170081574 + AT_rich Low_complexity Low_complexity 1 50 0 282 287 88 52 chr2 80607516 80607652 -170080202 - MIR SINE MIR 0 262 122 188 244 44 0 chr2 80607781 80607826 -170080028 - L2 LINE L2 -82 3231 3185 186 302 111 0 chr2 80607912 80607975 -170079879 + L2 LINE L2 3203 3272 0 260 303 127 35 chr2 80608282 80608424 -170079430 + MIR SINE MIR 102 256 -6 540 272 68 47 chr2 80608593 80608828 -170079026 + MIR SINE MIR 2 241 -21 294 29 0 0 chr2 80610148 80610183 -170077671 + (CA)n Simple_repeat Simple_repeat 2 36 0 2056 216 24 64 chr2 80610762 80611192 -170076662 - L1MB7 LINE L1 -19 6663 6262 3767 83 2 4 chr2 80611192 80611700 -170076154 + MER9 LTR ERVK 1 507 -4 2056 216 24 64 chr2 80611700 80611862 -170075992 - L1MB7 LINE L1 -420 6262 6095 390 21 0 0 chr2 80611863 80611910 -170075944 + (TG)n Simple_repeat Simple_repeat 2 48 0 590 256 55 10 chr2 80611910 80612109 -170075745 - L1MB7 LINE L1 -2547 4097 3890 * 1857 269 43 58 chr2 80612106 80612864 -170074990 - L1MB7 LINE L1 -5794 748 2 2010 120 43 0 chr2 80613079 80613379 -170074475 - AluSq SINE Alu 0 313 1 30 59 0 0 chr2 80614519 80614570 -170073284 + AT_rich Low_complexity Low_complexity 1 51 0 2114 121 0 10 chr2 80614977 80615290 -170072564 + AluSx SINE Alu 1 310 -2 294 306 174 28 chr2 80615440 80615584 -170072270 + MER5A DNA MER1_type 4 168 -21 25 0 0 0 chr2 80616381 80616406 -170071448 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr2 80617526 80617556 -170070298 + AT_rich Low_complexity Low_complexity 1 30 0 25 65 0 0 chr2 80618049 80618095 -170069759 + AT_rich Low_complexity Low_complexity 1 46 0 2766 16 0 0 chr2 80618097 80618407 -170069447 + AluYa5 SINE Alu 1 310 -1 318 26 0 0 chr2 80620833 80620872 -170066982 + (CA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr2 80620980 80621010 -170066844 + AT_rich Low_complexity Low_complexity 1 30 0 1519 213 40 11 chr2 80621246 80621599 -170066255 - MLT1A1 LTR MaLR -2 363 1 285 308 0 0 chr2 80621750 80621815 -170066039 + MER58A DNA MER1_type 3 67 -40 450 278 16 8 chr2 80621940 80622066 -170065788 + MER58A DNA MER1_type 28 154 0 1023 111 111 6 chr2 80622078 80622259 -170065595 - MER30 DNA MER1_type -30 200 1 34 65 0 0 chr2 80622503 80622565 -170065289 + AT_rich Low_complexity Low_complexity 1 62 0 1842 327 50 22 chr2 80622593 80623416 -170064438 + L2 LINE L2 1762 2607 -707 254 303 108 56 chr2 80623418 80623870 -170063984 + L2 LINE L2 2777 3273 -40 405 0 0 0 chr2 80623873 80623918 -170063936 + (CA)n Simple_repeat Simple_repeat 2 46 0 23 78 0 0 chr2 80623962 80624013 -170063841 + AT_rich Low_complexity Low_complexity 1 51 0 24 0 0 0 chr2 80625048 80625072 -170062782 + AT_rich Low_complexity Low_complexity 1 24 0 22 88 0 0 chr2 80625459 80625516 -170062338 + AT_rich Low_complexity Low_complexity 1 57 0 602 176 29 47 chr2 80626414 80626584 -170061270 - AluY SINE Alu 0 311 145 1898 105 10 10 chr2 80627009 80627304 -170060550 - AluY SINE Alu -16 295 1 333 257 131 47 chr2 80627472 80627686 -170060168 + MLT1J LTR MaLR 266 497 -14 473 261 93 25 chr2 80627797 80627958 -170059896 + MIR SINE MIR 12 183 -79 22 56 0 0 chr2 80628386 80628422 -170059432 + AT_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr2 80628671 80628703 -170059151 + AT_rich Low_complexity Low_complexity 1 32 0 606 327 64 20 chr2 80629317 80629568 -170058286 - MIR SINE MIR 0 262 1 192 77 0 0 chr2 80629609 80629635 -170058219 + (TG)n Simple_repeat Simple_repeat 2 27 0 1912 123 31 3 chr2 80629676 80629842 -170058012 - AluSq SINE Alu -12 301 122 192 77 0 0 chr2 80629842 80629868 -170057986 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1912 123 31 3 chr2 80629868 80629994 -170057860 - AluSq SINE Alu -191 122 1 848 292 65 72 chr2 80630080 80630933 -170056921 + L1ME3A LINE L1 1 847 -5272 1976 47 0 22 chr2 80631447 80631721 -170056133 + LTR7 LTR ERV1 24 291 -159 2182 43 0 7 chr2 80631821 80632103 -170055751 + LTR7 LTR ERV1 169 448 -2 19497 92 58 44 chr2 80632105 80635351 -170052503 + HERVH LTR ERV1 1 3290 -4423 3271 121 4 6 chr2 80635341 80635844 -170052010 + HERVH LTR ERV1 3492 3993 -3720 * 4303 132 14 1 chr2 80635846 80636500 -170051354 + HERVH LTR ERV1 4488 5149 -2564 1388 130 19 0 chr2 80636501 80636717 -170051137 + HERVH LTR ERV1 5600 5819 -1894 * 2435 76 47 16 chr2 80636715 80637095 -170050759 + HERVH LTR ERV1 7322 7713 0 2776 44 6 8 chr2 80637095 80637461 -170050393 + LTR7 LTR ERV1 1 365 -85 5039 178 57 8 chr2 80637465 80638927 -170048927 + L1MA7 LINE L1 4204 5736 -555 1987 112 0 23 chr2 80638940 80639244 -170048610 - AluSx SINE Alu -15 297 1 287 96 135 0 chr2 80639245 80639297 -170048557 + L1MA7 LINE L1 5802 5860 -445 1100 200 44 4 chr2 80639323 80639593 -170048261 + L1MA7 LINE L1 6007 6287 -4 330 252 166 7 chr2 80639648 80639787 -170048067 + HAL1 LINE L1 1486 1646 -861 29 28 0 0 chr2 80639893 80639929 -170047925 + AT_rich Low_complexity Low_complexity 1 36 0 273 287 34 81 chr2 80640300 80640596 -170047258 + L1ME3A LINE L1 2114 2395 -3734 23 33 0 0 chr2 80640654 80640684 -170047170 + AT_rich Low_complexity Low_complexity 1 30 0 417 294 113 24 chr2 80640842 80641498 -170046356 + L1ME3A LINE L1 2659 3372 -2757 713 302 70 17 chr2 80641705 80642768 -170045086 + L1ME3A LINE L1 4739 5847 -306 33 0 0 0 chr2 80643278 80643311 -170044543 + AT_rich Low_complexity Low_complexity 1 33 0 493 275 104 33 chr2 80643849 80644242 -170043612 + L1MC5 LINE L1 7314 7734 -227 1916 95 42 4 chr2 80644275 80644538 -170043316 - AluSc SINE Alu -8 301 29 697 294 14 32 chr2 80646216 80646437 -170041417 + MER58A DNA MER1_type 2 218 -6 231 111 0 167 chr2 80647067 80647139 -170040715 - L1MCa LINE L1 -4362 2064 2005 1073 319 77 12 chr2 80647371 80647875 -170039979 + L2 LINE L2 2244 2780 -534 368 260 64 98 chr2 80648490 80648761 -170039093 + L1MC5 LINE L1 7459 7709 -252 2742 30 0 12 chr2 80648761 80649099 -170038755 + L1PA4 LINE L1 5817 6150 -5 368 260 64 98 chr2 80649099 80649296 -170038558 + L1MC5 LINE L1 7709 7911 -50 22 0 0 0 chr2 80649301 80649323 -170038531 + AT_rich Low_complexity Low_complexity 1 22 0 531 349 90 41 chr2 80649386 80649799 -170038055 + L2 LINE L2 2847 3279 -34 189 74 0 0 chr2 80650210 80650237 -170037617 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2303 109 3 0 chr2 80650968 80651280 -170036574 + AluSp SINE Alu 1 313 0 188 167 21 0 chr2 80651721 80651769 -170036085 + GA-rich Low_complexity Low_complexity 1 49 0 31 88 0 0 chr2 80651859 80651939 -170035915 + AT_rich Low_complexity Low_complexity 1 80 0 2430 15 0 0 chr2 80652007 80652280 -170035574 - AluYa5 SINE Alu -4 307 35 582 328 142 23 chr2 80652820 80653566 -170034288 + L1MEd LINE L1 423 1257 -4862 21 36 0 0 chr2 80654123 80654151 -170033703 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 80654382 80654403 -170033451 + AT_rich Low_complexity Low_complexity 1 21 0 1649 114 7 77 chr2 80654534 80654858 -170032996 - AluSc SINE Alu 0 303 1 2466 187 68 24 chr2 80654858 80655361 -170032493 + Tigger7 DNA MER2_type 2 526 -1961 380 283 0 0 chr2 80655355 80655447 -170032407 + Tigger7 DNA MER2_type 2396 2487 0 * 13794 92 7 6 chr2 80656125 80658022 -170029832 - HERVK11 LTR ERVK -6053 1900 1 4043 128 80 27 chr2 80658022 80659035 -170028819 - MER11A LTR ERVK 0 1266 1 1038 215 91 45 chr2 80660238 80660657 -170027197 - L1MB8 LINE L1 -27 6151 5714 251 339 147 34 chr2 80662112 80662289 -170025565 + MIR SINE MIR 12 208 -54 435 227 84 8 chr2 80662295 80662414 -170025440 + MER94 DNA DNA 7 134 0 261 324 102 0 chr2 80662961 80663069 -170024785 - L2 LINE L2 -3 3310 3192 303 283 40 27 chr2 80663338 80663513 -170024341 - MLT1J2 LTR MaLR 0 428 277 445 196 20 14 chr2 80665849 80665997 -170021857 + (TA)n Simple_repeat Simple_repeat 2 150 0 279 0 0 0 chr2 80666646 80666677 -170021177 + (GA)n Simple_repeat Simple_repeat 2 32 0 389 315 56 0 chr2 80670008 80670151 -170017703 - MIR SINE MIR -82 180 30 390 309 49 15 chr2 80671643 80671847 -170016007 + L1ME LINE L1 5529 5739 -382 234 0 0 0 chr2 80671944 80671970 -170015884 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1983 130 0 3 chr2 80671972 80672257 -170015597 - AluSx SINE Alu -25 287 4 30 59 0 0 chr2 80672666 80672717 -170015137 + AT_rich Low_complexity Low_complexity 1 51 0 2010 120 43 0 chr2 80673857 80674157 -170013697 + AluSq SINE Alu 1 313 0 1791 264 50 63 chr2 80674372 80675129 -170012725 + L1MB7 LINE L1 2 748 -5794 590 256 55 10 chr2 80675126 80675325 -170012529 + L1MB7 LINE L1 3890 4097 -2547 * 390 21 0 0 chr2 80675325 80675372 -170012482 + (CA)n Simple_repeat Simple_repeat 2 48 0 2069 211 25 64 chr2 80675373 80675535 -170012319 + L1MB7 LINE L1 6095 6262 -420 3767 83 2 4 chr2 80675535 80676043 -170011811 - MER9 LTR ERVK -4 507 1 2069 211 25 64 chr2 80676043 80676472 -170011382 + L1MB7 LINE L1 6262 6663 -19 213 200 0 0 chr2 80677049 80677094 -170010760 + (TG)n Simple_repeat Simple_repeat 2 46 0 319 141 0 28 chr2 80678928 80678999 -170008855 + (TA)n Simple_repeat Simple_repeat 1 69 0 22 0 0 0 chr2 80680140 80680162 -170007692 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 80680365 80680401 -170007453 + AT_rich Low_complexity Low_complexity 1 36 0 590 314 47 6 chr2 80680438 80680607 -170007247 + MLT1F LTR MaLR 3 178 -364 182 37 37 0 chr2 80680615 80680642 -170007212 + (TC)n Simple_repeat Simple_repeat 2 29 0 2427 79 0 0 chr2 80680884 80681189 -170006665 + AluSg SINE Alu 1 305 -5 243 0 0 0 chr2 80681417 80681444 -170006410 + (TAGA)n Simple_repeat Simple_repeat 2 28 0 1972 118 0 24 chr2 80681670 80681957 -170005897 - AluSq SINE Alu -29 284 5 2379 73 0 0 chr2 80683532 80683832 -170004022 - AluY SINE Alu -11 300 1 2788 10 0 0 chr2 80683846 80684155 -170003699 - AluYa5 SINE Alu -2 309 1 23 0 0 0 chr2 80684161 80684184 -170003670 + AT_rich Low_complexity Low_complexity 1 23 0 270 206 96 0 chr2 80684260 80684333 -170003521 - MIR SINE MIR -72 190 111 936 212 32 125 chr2 80684829 80684886 -170002968 - MLT1A1 LTR MaLR 0 390 329 3548 139 31 3 chr2 80684886 80685491 -170002363 - L1MA4A LINE L1 -2 6301 5680 936 212 32 125 chr2 80685491 80685842 -170002012 - MLT1A1 LTR MaLR -61 329 6 254 325 0 0 chr2 80685866 80685949 -170001905 + GA-rich Low_complexity Low_complexity 5 87 0 24 32 0 0 chr2 80688883 80688914 -169998940 + AT_rich Low_complexity Low_complexity 1 31 0 723 92 0 0 chr2 80689038 80689136 -169998718 + L1PA5 LINE L1 1 98 -6048 * 36239 63 4 1 chr2 80689134 80694647 -169993207 + L1PA5 LINE L1 623 6148 -6 330 26 0 0 chr2 80695441 80695480 -169992374 + (CA)n Simple_repeat Simple_repeat 1 39 0 241 345 55 0 chr2 80695868 80695978 -169991876 - MIR SINE MIR -124 138 23 314 298 61 0 chr2 80696087 80696201 -169991653 - MIR SINE MIR -12 250 130 1255 342 19 5 chr2 80696974 80697392 -169990462 - LTR16A LTR ERVL -11 439 16 254 232 0 12 chr2 80698218 80698300 -169989554 + (TA)n Simple_repeat Simple_repeat 2 82 0 21 36 0 0 chr2 80698380 80698408 -169989446 + AT_rich Low_complexity Low_complexity 1 28 0 2280 89 0 20 chr2 80698508 80698842 -169989012 + AluY SINE Alu 1 311 0 32 26 0 0 chr2 80700019 80700058 -169987796 + AT_rich Low_complexity Low_complexity 1 39 0 904 189 70 87 chr2 80702116 80702428 -169985426 + MER33 DNA MER1_type 14 320 -4 33 0 0 0 chr2 80703786 80703819 -169984035 + AT_rich Low_complexity Low_complexity 1 33 0 1804 188 102 8 chr2 80703995 80704134 -169983720 - L1MA10 LINE L1 -1 6333 6208 378 107 0 0 chr2 80704134 80704190 -169983664 + (TG)n Simple_repeat Simple_repeat 2 57 0 1804 188 102 8 chr2 80704190 80704444 -169983410 - L1MA10 LINE L1 -126 6208 5903 1459 192 76 3 chr2 80704411 80704741 -169983113 + L1MA10 LINE L1 5584 5935 -278 * 216 0 0 0 chr2 80704807 80704831 -169983023 + (TTG)n Simple_repeat Simple_repeat 1 24 0 425 324 75 33 chr2 80705248 80705348 -169982506 + MIR SINE MIR 18 112 -150 2151 116 0 0 chr2 80705348 80705649 -169982205 - AluY SINE Alu -10 301 1 425 324 75 33 chr2 80705649 80705787 -169982067 + MIR SINE MIR 112 246 -16 969 185 17 0 chr2 80705820 80706052 -169981802 - L1MA7 LINE L1 0 6291 6056 315 290 46 74 chr2 80707462 80707786 -169980068 + L1ME LINE L1 5462 5776 -345 31 82 0 0 chr2 80708213 80708286 -169979568 + AT_rich Low_complexity Low_complexity 1 73 0 23 0 0 0 chr2 80708573 80708596 -169979258 + AT_rich Low_complexity Low_complexity 1 23 0 1294 231 6 18 chr2 80708724 80709053 -169978801 + L1MA6 LINE L1 5966 6290 -10 24 0 0 0 chr2 80709053 80709077 -169978777 + AT_rich Low_complexity Low_complexity 1 24 0 778 244 6 0 chr2 80709729 80709893 -169977961 - AluJb SINE Alu -12 300 136 22 88 0 0 chr2 80710502 80710559 -169977295 + AT_rich Low_complexity Low_complexity 1 57 0 668 239 72 42 chr2 80710749 80711013 -169976841 + L1MC5 LINE L1 7253 7524 -437 267 331 7 0 chr2 80711313 80711455 -169976399 - L1MEd LINE L1 -3603 2526 2384 7733 164 38 29 chr2 80712166 80712391 -169975463 - Tigger2 DNA MER2_type 0 2718 2497 1259 73 0 0 chr2 80712391 80712555 -169975299 + L1PA5 LINE L1 5991 6154 0 7733 164 38 29 chr2 80712555 80713786 -169974068 - Tigger2 DNA MER2_type -221 2497 1248 421 243 123 49 chr2 80714227 80714572 -169973282 + LTR26 LTR ERV1 310 727 0 773 137 23 15 chr2 80714598 80714729 -169973125 - Tigger2 DNA MER2_type -2586 132 1 38351 80 18 3 chr2 80714924 80720984 -169966870 + L1PA5 LINE L1 4 6154 0 354 346 50 20 chr2 80721225 80721427 -169966427 - L1MEd LINE L1 -4971 1148 941 2215 170 38 9 chr2 80721438 80721890 -169965964 - L1MA4 LINE L1 -5 6295 5831 2355 188 20 2 chr2 80721894 80722351 -169965503 + L1 LINE L1 3785 4249 -1897 1511 256 18 25 chr2 80722451 80722850 -169965004 + MSTD LTR MaLR 1 396 0 1594 288 97 21 chr2 80723062 80723632 -169964222 + MLT1E2 LTR MaLR 14 626 0 216 203 46 13 chr2 80723912 80724065 -169963789 + (TA)n Simple_repeat Simple_repeat 2 159 0 2091 117 0 7 chr2 80724268 80724597 -169963257 - AluSx SINE Alu 0 312 1 36 0 0 0 chr2 80724667 80724703 -169963151 + AT_rich Low_complexity Low_complexity 1 36 0 247 231 92 0 chr2 80724856 80724921 -169962933 - LTR33A LTR ERVL -19 504 434 2168 114 10 0 chr2 80725335 80725641 -169962213 + AluSg SINE Alu 1 309 -1 373 196 59 20 chr2 80725828 80725930 -169961924 - MLT1I LTR MaLR 0 409 304 254 304 148 59 chr2 80726379 80726682 -169961172 - L3 LINE CR1 -1 1576 1247 516 149 0 65 chr2 80726682 80726789 -169961065 - FRAM SINE Alu -73 103 4 1876 46 4 0 chr2 80727665 80727905 -169959949 - L1PA4 LINE L1 0 6155 5915 2012 118 13 32 chr2 80728079 80728250 -169959604 - AluSx SINE Alu 0 312 148 4065 98 41 2 chr2 80728250 80728832 -169959022 + LTR14B LTR ERVK 4 608 0 2012 118 13 32 chr2 80728832 80728975 -169958879 - AluSx SINE Alu -164 148 4 22 0 0 0 chr2 80728986 80729008 -169958846 + AT_rich Low_complexity Low_complexity 1 22 0 423 319 9 0 chr2 80729356 80729469 -169958385 + MER81 DNA DNA 1 114 0 2170 172 50 39 chr2 80729830 80730301 -169957553 + MER41B LTR ERV1 148 474 -12 307 204 0 0 chr2 80731065 80731119 -169956735 + MIR SINE MIR 209 262 0 2298 84 0 0 chr2 80731326 80731638 -169956216 + AluSg SINE Alu 2 313 0 369 309 49 15 chr2 80731735 80731939 -169955915 - L1ME LINE L1 -382 5739 5529 384 286 63 0 chr2 80733448 80733574 -169954280 + MIR SINE MIR 47 180 -82 5524 88 1 5 chr2 80734831 80735580 -169952274 + L1PA8A LINE L1 5383 6128 -3 1974 17 60 0 chr2 80735586 80735819 -169952035 - L1P LINE L1 -1875 4271 4025 7150 42 6 2 chr2 80735819 80737110 -169950744 + L1PA4 LINE L1 4857 6150 -5 431 39 0 104 chr2 80737046 80737123 -169950731 + L1PA4 LINE L1 6087 6155 0 22 0 0 0 chr2 80737301 80737323 -169950531 + AT_rich Low_complexity Low_complexity 1 22 0 497 355 74 0 chr2 80738797 80739014 -169948840 + MIR SINE MIR 18 250 -12 183 303 79 0 chr2 80739016 80739092 -169948762 - MIR SINE MIR -123 139 58 22 0 0 0 chr2 80739580 80739602 -169948252 + AT_rich Low_complexity Low_complexity 1 22 0 770 265 64 4 chr2 80740164 80740398 -169947456 + LTR16A1 LTR ERVL 169 416 -41 1795 28 0 0 chr2 80740439 80740654 -169947200 + L1PA4 LINE L1 5938 6152 -3 23 68 0 0 chr2 80740859 80740903 -169946951 + AT_rich Low_complexity Low_complexity 1 44 0 222 311 167 51 chr2 80741130 80741387 -169946467 + L2 LINE L2 1474 1760 -1554 302 396 68 5 chr2 80741818 80742010 -169945844 + L2 LINE L2 2430 2633 -681 180 283 0 0 chr2 80742025 80742071 -169945783 - MIR SINE MIR -168 94 49 1466 224 29 11 chr2 80742399 80742747 -169945107 + MLT1A1 LTR MaLR 1 354 -11 265 254 7 7 chr2 80742760 80742902 -169944952 + (TA)n Simple_repeat Simple_repeat 1 142 0 2238 97 3 16 chr2 80743311 80743619 -169944235 - AluSq SINE Alu -9 304 1 24 85 0 0 chr2 80744418 80744477 -169943377 + AT_rich Low_complexity Low_complexity 1 59 0 29 47 0 0 chr2 80744570 80744613 -169943241 + AT_rich Low_complexity Low_complexity 1 43 0 305 174 0 29 chr2 80744780 80744849 -169943005 - L1PA10 LINE L1 -3 6165 6099 961 271 74 18 chr2 80744910 80745356 -169942498 - Zaphod DNA AcHobo -1 4030 3560 24 53 0 0 chr2 80745543 80745581 -169942273 + AT_rich Low_complexity Low_complexity 1 38 0 1064 233 199 0 chr2 80745623 80745970 -169941884 - Zaphod DNA AcHobo -1155 2876 2461 1425 176 11 97 chr2 80745984 80746364 -169941490 + MER7A DNA MER2_type 2 346 0 501 221 177 40 chr2 80746369 80746547 -169941307 - Zaphod DNA AcHobo -3246 785 633 1787 96 127 0 chr2 80746547 80746807 -169941047 + AluSq SINE Alu 1 293 -20 501 221 177 40 chr2 80746807 80746927 -169940927 - Zaphod DNA AcHobo -3398 633 446 322 323 46 23 chr2 80747015 80747145 -169940709 - Zaphod DNA AcHobo -3722 309 177 456 309 39 6 chr2 80747176 80747357 -169940497 + MLT1L LTR MaLR 388 574 -41 270 239 99 0 chr2 80747357 80747428 -169940426 - LTR33A LTR ERVL 0 523 446 22 70 0 0 chr2 80748162 80748205 -169939649 + AT_rich Low_complexity Low_complexity 1 43 0 32 43 0 0 chr2 80748290 80748336 -169939518 + AT_rich Low_complexity Low_complexity 1 46 0 674 165 55 18 chr2 80749204 80749368 -169938486 - L1MA5A LINE L1 -4 6293 6124 1526 181 10 40 chr2 80749483 80749787 -169938067 + AluSx SINE Alu 13 307 -5 423 325 71 21 chr2 80751039 80751322 -169936532 - MLT1I LTR MaLR -2 407 111 507 298 159 5 chr2 80752247 80752455 -169935399 - MIR SINE MIR -21 241 2 180 0 0 0 chr2 80752518 80752538 -169935316 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 270 264 202 0 chr2 80753028 80753157 -169934697 + MER103 DNA DNA 11 165 -1 230 282 12 12 chr2 80753393 80753478 -169934376 + (TA)n Simple_repeat Simple_repeat 1 85 0 356 352 59 18 chr2 80755788 80756061 -169931793 + MER102b DNA MER1_type 49 332 -9 243 188 0 0 chr2 80756112 80756160 -169931694 + (TA)n Simple_repeat Simple_repeat 2 49 0 251 291 104 22 chr2 80757215 80757349 -169930505 + MIR SINE MIR 71 215 -47 312 91 0 0 chr2 80757373 80757417 -169930437 + (ATG)n Simple_repeat Simple_repeat 1 44 0 341 358 50 76 chr2 80757547 80757849 -169930005 + L2 LINE L2 2979 3272 0 333 320 66 54 chr2 80758256 80758734 -169929120 - L2 LINE L2 -98 3215 2730 1548 181 3 23 chr2 80758862 80759161 -169928693 - AluJb SINE Alu -19 293 1 1283 220 10 26 chr2 80759198 80759502 -169928352 - AluSx SINE Alu -3 299 1 2024 128 3 0 chr2 80759512 80759800 -169928054 - AluSx SINE Alu -22 290 2 219 36 0 0 chr2 80760154 80760182 -169927672 + (TA)n Simple_repeat Simple_repeat 1 28 0 277 224 59 0 chr2 80760250 80760335 -169927519 + L1MC4 LINE L1 6614 6703 -1339 237 95 0 0 chr2 80760358 80760400 -169927454 - LTR66 LTR ERVL -175 435 394 2188 121 0 0 chr2 80760884 80761190 -169926664 - AluSq SINE Alu -1 312 7 280 270 35 43 chr2 80762260 80762375 -169925479 - MER5B DNA MER1_type -48 130 17 509 281 211 16 chr2 80764059 80764490 -169923364 - LTR33A LTR ERVL -8 515 1 28 29 0 0 chr2 80764846 80764881 -169922973 + AT_rich Low_complexity Low_complexity 1 35 0 187 29 0 59 chr2 80765373 80765407 -169922447 + (TA)n Simple_repeat Simple_repeat 2 33 0 219 36 0 0 chr2 80765475 80765492 -169922362 + (GA)n Simple_repeat Simple_repeat 1 45 0 219 36 0 0 chr2 80765492 80765520 -169922334 + (GA)n Simple_repeat Simple_repeat 2 29 0 634 245 16 91 chr2 80766321 80766574 -169921280 + MIR SINE MIR 28 261 -1 201 158 0 0 chr2 80766959 80766997 -169920857 + A-rich Low_complexity Low_complexity 1 38 0 202 253 72 84 chr2 80767263 80767346 -169920508 + MIR SINE MIR 34 115 -93 22 56 0 0 chr2 80767693 80767729 -169920125 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 80767787 80767810 -169920044 + AT_rich Low_complexity Low_complexity 1 23 0 918 46 0 0 chr2 80769403 80769512 -169918342 + AluSc SINE Alu 1 109 -200 275 146 0 0 chr2 80769522 80769585 -169918269 + AluSc SINE Alu 240 302 0 395 305 32 86 chr2 80769754 80769809 -169918045 + MER5B DNA MER1_type 1 57 -121 2379 57 7 3 chr2 80769809 80770105 -169917749 + AluY SINE Alu 1 297 -14 395 305 32 86 chr2 80770105 80770236 -169917618 + MER5B DNA MER1_type 57 177 -1 360 25 0 75 chr2 80770354 80770434 -169917420 + (TTAA)n Simple_repeat Simple_repeat 4 77 0 261 0 0 0 chr2 80770459 80770488 -169917366 + (TA)n Simple_repeat Simple_repeat 2 30 0 243 326 93 0 chr2 80770902 80770988 -169916866 + L2 LINE L2 3215 3308 -5 1986 139 3 25 chr2 80770995 80771312 -169916542 - AluSp SINE Alu -3 310 1 378 0 0 0 chr2 80771521 80771563 -169916291 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 244 293 126 36 chr2 80771830 80771997 -169915857 - L2 LINE L2 -5 3308 3127 4659 204 32 28 chr2 80772384 80772935 -169914919 + L1MC1 LINE L1 4612 5160 -1173 2132 119 0 0 chr2 80772935 80773248 -169914606 + AluSq SINE Alu 1 313 0 4659 204 32 28 chr2 80773248 80774361 -169913493 + L1MC1 LINE L1 5160 6331 -2 2194 99 3 3 chr2 80774689 80774983 -169912871 + AluSp SINE Alu 1 294 -19 309 151 0 0 chr2 80774983 80775036 -169912818 + (TA)n Simple_repeat Simple_repeat 1 53 0 268 303 0 0 chr2 80775037 80775126 -169912728 - L1MC4 LINE L1 -1340 6702 6614 * 300 272 0 22 chr2 80775048 80775140 -169912714 + L1MC4 LINE L1 6614 6703 -1339 603 335 36 12 chr2 80775377 80775625 -169912229 - MIR SINE MIR -1 261 8 23 33 0 0 chr2 80775839 80775869 -169911985 + AT_rich Low_complexity Low_complexity 1 30 0 730 209 7 0 chr2 80776668 80776807 -169911047 - MLT1B LTR MaLR -48 342 203 197 280 97 11 chr2 80776969 80777062 -169910792 + L2 LINE L2 1610 1710 -1604 4557 243 78 53 chr2 80777108 80780271 -169907583 + L1MD2 LINE L1 602 4016 -2524 2286 130 14 11 chr2 80780271 80780632 -169907222 + THE1B LTR MaLR 3 364 0 4557 243 78 53 chr2 80780632 80781162 -169906692 + L1MD2 LINE L1 4016 4532 -2008 383 306 57 21 chr2 80781171 80781452 -169906402 + L1MD2 LINE L1 4642 4932 -1608 1068 249 44 46 chr2 80781489 80781585 -169906269 + L1MD2 LINE L1 5581 5676 -960 279 0 0 0 chr2 80781585 80781616 -169906238 + (CA)n Simple_repeat Simple_repeat 2 32 0 1068 249 44 46 chr2 80781616 80781749 -169906105 + L1MD2 LINE L1 5676 5808 -828 1767 110 0 4 chr2 80781749 80781994 -169905860 + AluSp SINE Alu 70 313 0 1068 249 44 46 chr2 80781994 80782200 -169905654 + L1MD2 LINE L1 5808 6029 -607 355 180 18 90 chr2 80782196 80782307 -169905547 + L1MD2 LINE L1 6433 6535 -218 * 364 200 23 16 chr2 80782328 80782461 -169905393 + L1MD3 LINE L1 6099 7985 -10 227 269 0 0 chr2 80782558 80782610 -169905244 + LTR37B LTR ERV1 7 58 -410 202 118 29 0 chr2 80782757 80782791 -169905063 + A-rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 80782967 80782996 -169904858 + AT_rich Low_complexity Low_complexity 1 29 0 544 373 36 8 chr2 80783027 80783274 -169904580 + MIR SINE MIR 8 261 -1 236 329 63 108 chr2 80783295 80783657 -169904197 - L2 LINE L2 -1 3271 2926 360 0 0 0 chr2 80784242 80784282 -169903572 + (TG)n Simple_repeat Simple_repeat 2 41 0 288 312 73 0 chr2 80785150 80785295 -169902559 + MLT1J LTR MaLR 67 222 -228 23988 40 0 1 chr2 80786100 80791704 -169896150 + L1PA4 LINE L1 550 6152 -3 221 301 55 0 chr2 80791762 80791835 -169896019 - MIR SINE MIR 0 262 186 38 81 0 0 chr2 80792337 80792424 -169895430 + AT_rich Low_complexity Low_complexity 1 87 0 303 28 0 0 chr2 80792860 80792896 -169894958 + (TA)n Simple_repeat Simple_repeat 1 36 0 1038 311 72 63 chr2 80795328 80796062 -169891792 + L2 LINE L2 1903 2643 -671 474 340 98 53 chr2 80796053 80796429 -169891425 + L2 LINE L2 2895 3287 -26 * 233 264 216 16 chr2 80796941 80797066 -169890788 + MIR SINE MIR 104 253 -9 550 156 126 30 chr2 80797286 80797453 -169890401 + MER53 DNA DNA 4 186 -3 324 161 0 0 chr2 80797529 80797591 -169890263 + (CA)n Simple_repeat Simple_repeat 2 63 0 409 226 71 0 chr2 80797731 80797815 -169890039 + MER58 DNA MER1_type 1 90 -125 32 0 0 0 chr2 80797834 80797866 -169889988 + AT_rich Low_complexity Low_complexity 1 32 0 253 260 0 90 chr2 80797969 80798069 -169889785 - L2 LINE L2 -1 3312 3222 26 82 0 0 chr2 80799816 80799877 -169887977 + AT_rich Low_complexity Low_complexity 1 61 0 213 39 0 0 chr2 80800094 80800120 -169887734 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1680 110 60 39 chr2 80800122 80800403 -169887451 - AluSx SINE Alu -17 295 9 31 82 0 0 chr2 80800832 80800905 -169886949 + AT_rich Low_complexity Low_complexity 1 73 0 543 238 0 25 chr2 80800951 80801073 -169886781 + MER5B DNA MER1_type 10 128 -50 2324 167 56 23 chr2 80801078 80801558 -169886296 - L1PA16 LINE L1 -7 6159 5664 8137 228 20 26 chr2 80801560 80803953 -169883901 - L1PA16 LINE L1 -699 5467 3093 816 280 48 31 chr2 80804301 80804594 -169883260 + L1MA9 LINE L1 5973 6270 -42 385 237 51 112 chr2 80804719 80804934 -169882920 + L1MCc LINE L1 799 1000 -5423 605 263 46 40 chr2 80804936 80805282 -169882572 + L1MCc LINE L1 2097 2444 -4678 2033 250 56 41 chr2 80805902 80806899 -169880955 + L1MCc LINE L1 2810 3779 -3162 2016 259 81 53 chr2 80806903 80807826 -169880028 + L1MCc LINE L1 4664 5625 -1316 369 0 0 0 chr2 80807826 80807867 -169879987 + (CA)n Simple_repeat Simple_repeat 2 42 0 2016 259 81 53 chr2 80807867 80808046 -169879808 + L1MCc LINE L1 5625 5797 -1144 1848 238 62 10 chr2 80808359 80808877 -169878977 - L1MB3 LINE L1 -1066 5875 5331 1151 189 37 8 chr2 80808886 80809285 -169878569 + L1MB3 LINE L1 5884 6290 -688 3289 178 27 27 chr2 80809327 80809751 -169878103 + L1MB3 LINE L1 6272 6698 -280 2467 58 13 3 chr2 80809751 80810061 -169877793 + AluSp SINE Alu 1 313 0 3289 178 27 27 chr2 80810061 80810340 -169877514 + L1MB3 LINE L1 6697 6975 -3 5502 16 2 0 chr2 80810394 80811028 -169876826 - L1PA2 LINE L1 -4 6151 5517 1146 305 98 41 chr2 80811166 80811727 -169876127 + MLT1E LTR MaLR 1 593 0 899 227 200 0 chr2 80811885 80812013 -169875841 + AluSx SINE Alu 1 102 -210 216 0 0 0 chr2 80812013 80812037 -169875817 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 899 227 200 0 chr2 80812037 80812168 -169875686 + AluSx SINE Alu 102 312 0 796 212 76 0 chr2 80813049 80813233 -169874621 - MER3 DNA MER1_type 0 209 12 290 239 14 14 chr2 80813341 80813483 -169874371 + (TA)n Simple_repeat Simple_repeat 2 143 0 26 0 0 0 chr2 80814549 80814575 -169873279 + AT_rich Low_complexity Low_complexity 1 26 0 273 324 11 11 chr2 80814713 80814892 -169872962 + (TA)n Simple_repeat Simple_repeat 2 180 0 1506 195 37 23 chr2 80815431 80815452 -169872402 - L1MC3 LINE L1 -63 7722 7703 3397 133 23 6 chr2 80815452 80815970 -169871884 + MER1A DNA MER1_type 1 527 0 1506 195 37 23 chr2 80815970 80816296 -169871558 - L1MC3 LINE L1 -82 7703 7370 273 322 11 11 chr2 80816376 80816466 -169871388 + MER21B LTR ERV1 1 90 -773 2634 221 55 43 chr2 80816557 80817273 -169870581 + MER21B LTR ERV1 139 862 -1 514 254 29 7 chr2 80817282 80817420 -169870434 - L1MC3 LINE L1 -486 7299 7159 769 218 73 1 chr2 80817699 80817886 -169869968 - MLT1B LTR MaLR 0 374 189 303 104 0 0 chr2 80817897 80817945 -169869909 + (GA)n Simple_repeat Simple_repeat 2 49 0 510 289 17 28 chr2 80817958 80818138 -169869716 - MLT1B LTR MaLR -193 181 4 1576 186 80 29 chr2 80818853 80819229 -169868625 + MSTD LTR MaLR 2 396 0 1100 250 0 0 chr2 80819586 80819810 -169868044 + MER58A DNA MER1_type 1 224 0 253 298 61 23 chr2 80820356 80820487 -169867367 + HAL1 LINE L1 476 611 -1896 234 286 133 0 chr2 80820732 80820837 -169867017 + HAL1 LINE L1 1130 1248 -1259 836 243 20 105 chr2 80820843 80821242 -169866612 - MLT1A1 LTR MaLR 0 365 1 233 289 16 50 chr2 80821251 80821372 -169866482 - MER94 DNA DNA -16 118 2 238 229 16 0 chr2 80821444 80821505 -169866349 + HAL1 LINE L1 1403 1464 -1043 511 345 91 42 chr2 80821550 80822232 -169865622 + L2 LINE L2 2043 2757 -557 712 215 15 51 chr2 80822419 80822614 -169865240 + MER5A DNA MER1_type 2 189 0 181 294 0 20 chr2 80823444 80823495 -169864359 - MIR SINE MIR -123 85 36 4728 169 110 20 chr2 80824251 80825187 -169862667 + LTR28 LTR ERV1 1 1020 0 216 384 13 50 chr2 80825528 80825687 -169862167 + L2 LINE L2 2898 3050 -222 1263 189 36 14 chr2 80826172 80826505 -169861349 + MSTB1 LTR MaLR 1 432 0 186 43 0 0 chr2 80827744 80827767 -169860087 + (CA)n Simple_repeat Simple_repeat 2 24 0 658 172 0 21 chr2 80829907 80830052 -169857802 + GA-rich Low_complexity Low_complexity 3 144 0 188 111 28 0 chr2 80830094 80830130 -169857724 + (TA)n Simple_repeat Simple_repeat 2 38 0 414 0 0 0 chr2 80830284 80830330 -169857524 + (TA)n Simple_repeat Simple_repeat 2 47 0 211 194 0 0 chr2 80831568 80831604 -169856250 + CT-rich Low_complexity Low_complexity 1 36 0 618 331 95 40 chr2 80832752 80833196 -169854658 - L3 LINE CR1 -142 1435 968 283 196 31 72 chr2 80833247 80833344 -169854510 - L1MC5 LINE L1 -32 7929 7837 1614 224 62 44 chr2 80833536 80834032 -169853822 + MLT1D LTR MaLR 1 505 0 387 322 73 20 chr2 80834161 80834406 -169853448 + MIR SINE MIR 5 262 0 646 355 29 23 chr2 80834456 80834763 -169853091 - L3 LINE CR1 -1059 518 210 2519 203 2 20 chr2 80835551 80836107 -169851747 - L1PA16 LINE L1 -1511 4635 4090 5470 131 12 2 chr2 80836107 80837586 -169850268 + L1PA16 LINE L1 4648 6160 -6 207 0 0 0 chr2 80838938 80838961 -169848893 + (TA)n Simple_repeat Simple_repeat 1 23 0 2094 139 0 0 chr2 80839057 80839358 -169848496 + AluSx SINE Alu 1 301 -11 34 93 0 0 chr2 80839950 80840047 -169847807 + AT_rich Low_complexity Low_complexity 1 97 0 27 0 0 0 chr2 80840980 80841007 -169846847 + AT_rich Low_complexity Low_complexity 1 27 0 1060 247 37 12 chr2 80841056 80841299 -169846555 + Tigger7 DNA MER2_type 1 249 -484 * 1551 133 4 8 chr2 80841296 80841537 -169846317 + Tigger7 DNA MER2_type 2252 2491 0 34 24 0 0 chr2 80841799 80841840 -169846014 + AT_rich Low_complexity Low_complexity 1 41 0 323 303 42 36 chr2 80842186 80842351 -169845503 + HAL1b LINE L1 329 494 -854 1886 188 25 5 chr2 80843903 80844297 -169843557 + L1MA4 LINE L1 5899 6300 0 7732 20 0 1 chr2 80845388 80846455 -169841399 + L1PA3 LINE L1 5087 6152 -3 188 33 0 33 chr2 80846458 80846488 -169841366 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr2 80846578 80846602 -169841252 + AT_rich Low_complexity Low_complexity 1 24 0 324 315 75 14 chr2 80847459 80847605 -169840249 + MLT1I LTR MaLR 244 398 -11 210 269 19 0 chr2 80847629 80847681 -169840173 + (TATG)n Simple_repeat Simple_repeat 3 55 0 21 0 0 0 chr2 80848763 80848784 -169839070 + AT_rich Low_complexity Low_complexity 1 21 0 1665 170 12 92 chr2 80849122 80849546 -169838308 - MLT1B LTR MaLR 0 390 1 443 350 78 38 chr2 80849582 80849954 -169837900 - L1ME LINE L1 -382 5739 5353 257 149 15 0 chr2 80850689 80850756 -169837098 + (TTG)n Simple_repeat Simple_repeat 2 69 0 2303 42 0 10 chr2 80851834 80852122 -169835732 - AluY SINE Alu -8 303 19 270 353 44 29 chr2 80852126 80852262 -169835592 + MER5B DNA MER1_type 41 178 0 270 0 0 0 chr2 80852862 80852892 -169834962 + (CA)n Simple_repeat Simple_repeat 2 31 0 261 261 23 0 chr2 80852900 80852988 -169834866 - L1MC4 LINE L1 -1339 6703 6614 226 222 14 0 chr2 80852932 80853004 -169834850 + L1MCa LINE L1 1995 2067 -4359 * 2384 80 3 0 chr2 80853451 80853753 -169834101 - AluSc SINE Alu -6 303 1 368 309 134 22 chr2 80853987 80854210 -169833644 + MIR SINE MIR 1 248 -14 23 33 0 0 chr2 80854979 80855009 -169832845 + AT_rich Low_complexity Low_complexity 1 30 0 700 79 0 0 chr2 80856791 80856892 -169830962 + AluSp/q SINE Alu 209 309 -4 187 290 43 14 chr2 80857169 80857238 -169830616 + L2 LINE L2 3237 3307 -6 4208 152 17 2 chr2 80857238 80857993 -169829861 - L1MA8 LINE L1 -312 5979 5214 532 307 45 6 chr2 80858280 80858459 -169829395 - MIR SINE MIR -1 261 76 27 0 0 0 chr2 80858896 80858923 -169828931 + AT_rich Low_complexity Low_complexity 1 27 0 28 71 0 0 chr2 80859383 80859439 -169828415 + AT_rich Low_complexity Low_complexity 1 56 0 22 35 0 0 chr2 80859455 80859484 -169828370 + AT_rich Low_complexity Low_complexity 1 29 0 288 193 64 55 chr2 80859629 80859738 -169828116 - L1ME LINE L1 -296 5825 5716 2582 26 0 3 chr2 80860502 80860804 -169827050 - AluY SINE Alu -10 301 1 573 131 41 0 chr2 80861117 80861368 -169826486 + (TA)n Simple_repeat Simple_repeat 1 261 0 22 35 0 0 chr2 80861368 80861397 -169826457 + AT_rich Low_complexity Low_complexity 1 29 0 240 158 0 0 chr2 80862001 80862058 -169825796 + T-rich Low_complexity Low_complexity 2 58 0 560 14 14 0 chr2 80862920 80862989 -169824865 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 231 95 0 48 chr2 80863055 80863097 -169824757 + L1ME LINE L1 5786 5825 -296 927 254 0 0 chr2 80863111 80863312 -169824542 + MER58A DNA MER1_type 13 213 -11 210 191 0 0 chr2 80863557 80863599 -169824255 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 348 265 24 24 chr2 80864163 80864329 -169823525 + (TA)n Simple_repeat Simple_repeat 2 167 0 382 304 100 48 chr2 80864665 80864895 -169822959 + MIR SINE MIR 16 257 -5 185 132 26 0 chr2 80865875 80865913 -169821941 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 35 0 0 chr2 80867607 80867636 -169820218 + AT_rich Low_complexity Low_complexity 1 29 0 481 274 0 0 chr2 80867833 80867950 -169819904 + MIR SINE MIR 74 190 -72 2327 169 27 2 chr2 80867968 80868375 -169819479 + MER47B DNA MER2_type 1 417 -1 1330 181 24 107 chr2 80868840 80869220 -169818634 + MER67C LTR ERV1 30 403 -241 231 344 91 26 chr2 80869383 80869537 -169818317 + MIR SINE MIR 59 222 -40 487 275 85 72 chr2 80869729 80869808 -169818046 + L1ME4a LINE L1 5491 5568 -553 1558 201 10 3 chr2 80869808 80870096 -169817758 - AluSx SINE Alu -17 295 6 487 275 85 72 chr2 80870096 80870405 -169817449 + L1ME4a LINE L1 5568 5884 -237 2606 43 0 0 chr2 80871256 80871561 -169816293 - AluY SINE Alu -6 305 1 2140 108 0 7 chr2 80872362 80872659 -169815195 + AluSq SINE Alu 5 299 -14 36 23 0 0 chr2 80873974 80874017 -169813837 + AT_rich Low_complexity Low_complexity 1 43 0 23 54 0 0 chr2 80874120 80874157 -169813697 + AT_rich Low_complexity Low_complexity 1 37 0 255 61 0 0 chr2 80874824 80874857 -169812997 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 296 351 60 8 chr2 80875302 80875436 -169812418 - MIR SINE MIR -112 150 10 231 36 0 0 chr2 80876082 80876110 -169811744 + (TC)n Simple_repeat Simple_repeat 2 29 0 446 313 18 0 chr2 80876868 80876980 -169810874 - MIR SINE MIR -97 165 52 543 268 73 68 chr2 80877037 80877242 -169810612 + MIR SINE MIR 49 254 -8 299 335 36 36 chr2 80877455 80877622 -169810232 - L2 LINE L2 0 3313 3147 339 421 69 28 chr2 80877777 80878243 -169809611 - L2 LINE L2 -341 2973 2489 325 230 177 34 chr2 80878594 80878803 -169809051 - L2 LINE L2 -919 2395 2157 1089 256 73 40 chr2 80879239 80879634 -169808220 + MER39 LTR ERV1 300 707 0 1453 184 0 8 chr2 80879673 80879929 -169807925 - AluJo SINE Alu -36 276 23 219 203 0 0 chr2 80881062 80881121 -169806733 + GA-rich Low_complexity Low_complexity 4 62 0 237 261 0 14 chr2 80881715 80881784 -169806070 + CT-rich Low_complexity Low_complexity 2 69 0 232 209 0 0 chr2 80882546 80882589 -169805265 - L2 LINE L2 -5 3308 3266 236 273 18 97 chr2 80882661 80882826 -169805028 - L2 LINE L2 -59 3254 3103 21 57 0 0 chr2 80883896 80883931 -169803923 + AT_rich Low_complexity Low_complexity 1 35 0 1762 181 33 36 chr2 80886119 80886484 -169801370 + THE1B LTR MaLR 1 364 0 1971 118 40 0 chr2 80886484 80886788 -169801066 + THE1B-int LTR MaLR 1 316 -1264 * 5758 110 2 0 chr2 80886784 80887581 -169800273 + THE1B-int LTR MaLR 782 1580 0 1965 170 5 40 chr2 80887581 80887958 -169799896 + THE1B LTR MaLR 1 364 0 246 317 176 14 chr2 80888091 80888233 -169799621 + MIR SINE MIR 98 262 0 872 270 65 54 chr2 80888475 80889042 -169798812 + L2 LINE L2 2737 3313 0 822 277 56 9 chr2 80889091 80889304 -169798550 - MER58A DNA MER1_type -1 223 1 1181 107 0 12 chr2 80889342 80889593 -169798261 + (GGAA)n Simple_repeat Simple_repeat 1 249 0 5692 204 10 15 chr2 80889672 80890662 -169797192 + L1PA16 LINE L1 3688 4681 -1485 2140 158 11 8 chr2 80890662 80891036 -169796818 + THE1C LTR MaLR 1 375 0 5692 204 10 15 chr2 80891036 80892505 -169795349 + L1PA16 LINE L1 4681 6145 -21 296 299 15 0 chr2 80892710 80892777 -169795077 + L2 LINE L2 3246 3313 0 24 0 0 0 chr2 80893431 80893455 -169794399 + AT_rich Low_complexity Low_complexity 1 24 0 435 331 0 0 chr2 80893599 80893735 -169794119 + MIR SINE MIR 123 258 -4 182 289 36 133 chr2 80894471 80894720 -169793134 + L2 LINE L2 2836 3060 -212 180 111 0 0 chr2 80894878 80894905 -169792949 + L2 LINE L2 3245 3271 -1 290 239 0 15 chr2 80895279 80895346 -169792508 + MER103 DNA DNA 35 100 -66 862 210 27 32 chr2 80895496 80895715 -169792139 + MER20 DNA MER1_type 1 218 -1 247 339 79 31 chr2 80895719 80895946 -169791908 + MIR SINE MIR 12 249 -13 408 260 16 8 chr2 80896328 80896451 -169791403 + MLT1K LTR MaLR 455 578 -10 321 361 63 19 chr2 80897048 80897253 -169790601 - L2 LINE L2 -224 3089 2876 1173 261 127 34 chr2 80897373 80898027 -169789827 + L1ME1 LINE L1 1001 1715 -4825 253 215 0 58 chr2 80898214 80898335 -169789519 + (TAAA)n Simple_repeat Simple_repeat 1 114 0 240 232 98 31 chr2 80898337 80898531 -169789323 + L1ME1 LINE L1 2385 2591 -3949 844 228 35 90 chr2 80898541 80899066 -169788788 + L1ME1 LINE L1 5522 6010 -550 263 182 0 0 chr2 80899066 80899121 -169788733 - LTR66 LTR ERVL -162 448 394 844 228 35 90 chr2 80899121 80899540 -169788314 + L1ME1 LINE L1 6010 6451 -109 612 337 164 14 chr2 80900192 80900631 -169787223 + LTR33 LTR ERVL 9 513 -8 703 188 222 8 chr2 80900804 80901038 -169786816 - MER5C DNA MER1_type -1 323 40 226 196 0 39 chr2 80901178 80901229 -169786625 + L2 LINE L2 3256 3304 -9 225 0 0 0 chr2 80901280 80901305 -169786549 + (CA)n Simple_repeat Simple_repeat 2 26 0 26 74 0 0 chr2 80901567 80901621 -169786233 + AT_rich Low_complexity Low_complexity 1 54 0 36 40 0 0 chr2 80901700 80901750 -169786104 + AT_rich Low_complexity Low_complexity 1 50 0 25 83 0 0 chr2 80901999 80902059 -169785795 + AT_rich Low_complexity Low_complexity 1 60 0 377 286 173 22 chr2 80902059 80902377 -169785477 + L1MC/D LINE L1 3795 4160 -1986 457 316 62 85 chr2 80902433 80903186 -169784668 + L1MC/D LINE L1 4256 4991 -1155 2850 6 0 12 chr2 80903296 80903618 -169784236 + AluYb8 SINE Alu 1 318 0 23 68 0 0 chr2 80903657 80903701 -169784153 + AT_rich Low_complexity Low_complexity 1 44 0 353 303 31 57 chr2 80903929 80904157 -169783697 + L1MC/D LINE L1 5258 5479 -691 1732 174 3 0 chr2 80904174 80904479 -169783375 - L1PA13 LINE L1 -5 6158 5853 338 277 0 84 chr2 80904630 80904781 -169783073 + L1MC/D LINE L1 5678 5816 -317 234 0 0 0 chr2 80904870 80904896 -169782958 + (TA)n Simple_repeat Simple_repeat 1 26 0 627 143 41 0 chr2 80906533 80906631 -169781223 + MER66B LTR ERV1 254 355 -131 290 311 8 0 chr2 80906690 80906812 -169781042 - L1ME LINE L1 -322 5799 5677 198 0 0 0 chr2 80906941 80906963 -169780891 + (TTA)n Simple_repeat Simple_repeat 3 24 0 233 67 0 0 chr2 80906963 80906993 -169780861 - L1PA4 LINE L1 -18 6137 6108 2387 177 28 20 chr2 80907058 80907515 -169780339 - MER66A LTR ERV1 0 478 18 379 280 19 9 chr2 80907590 80907697 -169780157 - MER5A DNA MER1_type -1 188 81 572 308 54 8 chr2 80907770 80908030 -169779824 - LTR16A1 LTR ERVL -13 444 173 1712 191 0 3 chr2 80909068 80909366 -169778488 + AluJb SINE Alu 3 299 -13 187 342 88 61 chr2 80909374 80909602 -169778252 - L2 LINE L2 -509 2805 2572 1499 183 113 42 chr2 80911389 80911815 -169776039 - MSTB2 LTR MaLR 0 457 2 284 302 35 0 chr2 80911955 80912041 -169775813 - L1ME LINE L1 -2265 5543 5455 241 283 170 66 chr2 80912885 80913097 -169774757 + MIR SINE MIR 2 235 -27 21 57 0 0 chr2 80913258 80913293 -169774561 + AT_rich Low_complexity Low_complexity 1 35 0 2136 91 0 3 chr2 80913431 80913718 -169774136 + AluY SINE Alu 1 286 -25 654 49 0 0 chr2 80913718 80913800 -169774054 + (CGATA)n Simple_repeat Simple_repeat 3 84 0 435 19 0 0 chr2 80913800 80913852 -169774002 + (CATA)n Simple_repeat Simple_repeat 1 52 0 199 367 112 37 chr2 80914227 80914853 -169773001 + L2 LINE L2 1123 1795 -1519 185 271 0 21 chr2 80915062 80915110 -169772744 - MIR3 SINE MIR -52 156 110 1381 146 4 22 chr2 80915117 80915442 -169772412 + AluSx SINE Alu 61 381 0 227 267 0 17 chr2 80915467 80915527 -169772327 - MIR SINE MIR -187 75 17 23 0 0 0 chr2 80916177 80916200 -169771654 + AT_rich Low_complexity Low_complexity 1 23 0 546 270 41 41 chr2 80916210 80916406 -169771448 - MIR SINE MIR -61 201 6 51 65 0 0 chr2 80919138 80919231 -169768623 + AT_rich Low_complexity Low_complexity 1 93 0 563 316 161 43 chr2 80919353 80920121 -169767733 + L2 LINE L2 1759 2617 -697 225 252 143 25 chr2 80920504 80920623 -169767231 + L2 LINE L2 3121 3253 -60 488 198 104 0 chr2 80921123 80921229 -169766625 - MER3 DNA MER1_type 0 209 93 320 194 54 32 chr2 80921724 80921817 -169766037 - MIR SINE MIR -65 197 103 2156 216 5 2 chr2 80922020 80922464 -169765390 - L1M2 LINE L1 -578 5734 5290 339 226 28 9 chr2 80922476 80922582 -169765272 - L1P LINE L1 -924 5222 5115 746 296 32 22 chr2 80922613 80922874 -169764980 + L1MA9 LINE L1 5961 6227 -85 1870 122 42 62 chr2 80922874 80923228 -169764626 - MER7A DNA MER2_type 0 346 2 746 296 32 22 chr2 80923228 80923277 -169764577 + L1MA9 LINE L1 6227 6274 -38 22 35 0 0 chr2 80923280 80923309 -169764545 + AT_rich Low_complexity Low_complexity 1 29 0 1564 253 36 18 chr2 80925093 80925535 -169762319 - LTR40a LTR ERVL 0 519 70 275 120 0 20 chr2 80926344 80926394 -169761460 + (TA)n Simple_repeat Simple_repeat 2 50 0 608 244 31 16 chr2 80926761 80926954 -169760900 - L1MD3 LINE L1 -12 7983 7788 2887 171 22 23 chr2 80928523 80929126 -169758728 - L1MA10 LINE L1 -14 6320 5719 828 132 105 7 chr2 80929131 80929283 -169758571 - L1MB1 LINE L1 -118 6050 5884 1927 216 48 193 chr2 80929471 80930255 -169757599 - L1MC3 LINE L1 -16 7769 7119 391 271 21 0 chr2 80930255 80930351 -169757503 - MLT1F1 LTR MaLR -431 136 39 1927 216 48 193 chr2 80930351 80930712 -169757142 - L1MC3 LINE L1 -666 7119 6708 27 49 0 0 chr2 80930724 80930765 -169757089 + AT_rich Low_complexity Low_complexity 1 41 0 392 377 83 13 chr2 80930891 80931289 -169756565 - L1MEc LINE L1 -1944 4271 3846 470 299 139 42 chr2 80931374 80931872 -169755982 - L1MEc LINE L1 -2655 3560 3015 252 341 0 16 chr2 80932115 80932238 -169755616 + MIR SINE MIR 23 143 -119 319 294 166 18 chr2 80932342 80932505 -169755349 - L1MEc LINE L1 -3704 2511 2325 398 355 66 22 chr2 80933035 80933398 -169754456 - L1MEc LINE L1 -4614 1782 1404 390 334 18 54 chr2 80933679 80933903 -169753951 + L1MC/D LINE L1 5480 5695 -464 2169 117 3 0 chr2 80933954 80934254 -169753600 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 80934660 80934681 -169753173 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 80935002 80935026 -169752828 + AT_rich Low_complexity Low_complexity 1 24 0 190 383 58 19 chr2 80935830 80935984 -169751870 - MER5A DNA MER1_type -29 160 1 585 297 85 14 chr2 80937018 80937230 -169750624 - MIR SINE MIR -4 258 32 326 257 43 2 chr2 80937273 80937375 -169750479 + MER5A DNA MER1_type 66 188 -1 29 0 0 0 chr2 80939137 80939166 -169748688 + AT_rich Low_complexity Low_complexity 1 29 0 2096 108 3 32 chr2 80939180 80939495 -169748359 - AluSx SINE Alu -6 306 1 22 70 0 0 chr2 80939529 80939572 -169748282 + AT_rich Low_complexity Low_complexity 1 43 0 2264 57 60 0 chr2 80939827 80940128 -169747726 - L1PA8 LINE L1 -269 5885 5567 1964 64 15 0 chr2 80940128 80940392 -169747462 + L1PA8 LINE L1 5892 6162 -10 210 324 111 53 chr2 80940447 80940654 -169747200 + MIR SINE MIR 43 261 -1 952 258 151 21 chr2 80940825 80941162 -169746692 + LTR40a LTR ERVL 139 519 0 218 247 22 11 chr2 80942217 80942306 -169745548 + (TA)n Simple_repeat Simple_repeat 2 91 0 266 228 0 18 chr2 80943211 80943268 -169744586 + CT-rich Low_complexity Low_complexity 3 58 0 243 274 32 0 chr2 80943269 80943331 -169744523 - L2 LINE L2 -18 3254 3191 3233 262 66 29 chr2 80943378 80944682 -169743172 + Zaphod DNA AcHobo 1 1352 -2679 386 194 8 127 chr2 80944972 80945106 -169742748 + L1MA8 LINE L1 5635 5752 -539 3625 129 59 22 chr2 80945109 80945903 -169741951 + MER4D LTR ERV1 15 610 0 2662 156 20 35 chr2 80945903 80946454 -169741400 + L1MA8 LINE L1 5749 6291 0 465 357 39 19 chr2 80946948 80947206 -169740648 - L2 LINE L2 -480 2834 2572 477 167 185 25 chr2 80947299 80947461 -169740393 + MER53 DNA DNA 1 188 -1 22 0 0 0 chr2 80947641 80947663 -169740191 + AT_rich Low_complexity Low_complexity 1 22 0 4954 160 25 9 chr2 80947865 80948772 -169739082 - MER49 LTR ERV1 0 923 2 217 318 47 71 chr2 80948772 80948942 -169738912 - MIR SINE MIR -56 206 41 21 0 0 0 chr2 80949425 80949446 -169738408 + AT_rich Low_complexity Low_complexity 1 21 0 276 274 84 32 chr2 80949842 80949937 -169737917 + L2 LINE L2 3171 3270 -2 779 291 77 16 chr2 80951721 80952034 -169735820 - MER46C DNA MER2_type 0 338 7 21 36 0 0 chr2 80952060 80952088 -169735766 + AT_rich Low_complexity Low_complexity 1 28 0 484 113 0 62 chr2 80952102 80952182 -169735672 + LTR32 LTR ERVL 14 88 -383 * 2426 152 65 14 chr2 80952163 80952597 -169735257 + LTR32 LTR ERVL 16 471 0 42 0 0 0 chr2 80952604 80952646 -169735208 + AT_rich Low_complexity Low_complexity 1 42 0 767 152 61 12 chr2 80952647 80952812 -169735042 - L1MA8 LINE L1 -6 6285 6113 1085 134 45 35 chr2 80952820 80953022 -169734832 + L1MA8 LINE L1 5900 6103 -188 198 0 0 0 chr2 80953033 80953055 -169734799 + (CTAAA)n Simple_repeat Simple_repeat 4 25 0 309 300 64 36 chr2 80953071 80953211 -169734643 - MIR SINE MIR -70 192 49 577 129 129 0 chr2 80953490 80953606 -169734248 - L1MA6 LINE L1 -291 6009 5879 207 214 71 0 chr2 80953607 80953663 -169734191 + L2 LINE L2 1992 2051 -1263 589 296 150 49 chr2 80953768 80954254 -169733600 + L2 LINE L2 2426 2960 -354 1205 231 71 0 chr2 80954268 80954550 -169733304 + MER58B DNA MER1_type 33 334 -7 755 247 58 0 chr2 80954568 80954742 -169733112 + MER5A DNA MER1_type 6 189 0 589 266 141 27 chr2 80954786 80955042 -169732812 + L2 LINE L2 3029 3313 0 28 29 0 0 chr2 80955047 80955082 -169732772 + AT_rich Low_complexity Low_complexity 1 35 0 1528 211 0 11 chr2 80955600 80955884 -169731970 - AluJo SINE Alu -29 283 3 289 355 13 45 chr2 80956453 80956608 -169731246 + L2 LINE L2 2638 2787 -527 284 308 120 17 chr2 80956772 80956889 -169730965 + L2 LINE L2 3180 3308 -5 29 47 0 0 chr2 80956936 80956979 -169730875 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr2 80957305 80957327 -169730527 + AT_rich Low_complexity Low_complexity 1 22 0 266 325 65 0 chr2 80959336 80959413 -169728441 + L2 LINE L2 3122 3203 -69 1396 166 93 12 chr2 80959777 80960036 -169727818 - AluJo SINE Alu -30 282 3 377 292 102 75 chr2 80961988 80962214 -169725640 + L2 LINE L2 3041 3272 0 22 35 0 0 chr2 80962491 80962520 -169725334 + AT_rich Low_complexity Low_complexity 1 29 0 781 233 62 25 chr2 80962580 80962883 -169724971 - MSTD LTR MaLR 0 396 42 219 250 0 13 chr2 80963395 80963471 -169724383 + (TA)n Simple_repeat Simple_repeat 1 75 0 310 265 48 54 chr2 80964054 80964201 -169723653 + MER5B DNA MER1_type 4 149 -29 2287 64 0 58 chr2 80964719 80965119 -169722735 - AluY SINE Alu 0 381 1 25 0 0 0 chr2 80966116 80966141 -169721713 + AT_rich Low_complexity Low_complexity 1 25 0 560 318 97 29 chr2 80966509 80966890 -169720964 - MLT1K LTR MaLR 0 588 182 272 276 35 11 chr2 80966955 80967042 -169720812 - MLT1K LTR MaLR -499 89 1 186 43 0 0 chr2 80967048 80967071 -169720783 + (TCTCC)n Simple_repeat Simple_repeat 2 24 0 189 0 0 0 chr2 80967193 80967214 -169720640 + (CA)n Simple_repeat Simple_repeat 2 22 0 255 256 22 11 chr2 80967456 80967546 -169720308 + CT-rich Low_complexity Low_complexity 2 92 0 316 333 50 0 chr2 80967556 80967655 -169720199 - L2 LINE L2 -5 3267 3164 363 392 80 47 chr2 80968865 80969230 -169718624 + L2 LINE L2 2896 3272 0 7266 33 4 23 chr2 80970214 80971270 -169716584 + L1PA4 LINE L1 5117 6155 0 508 304 75 125 chr2 80971864 80972267 -169715587 + L2 LINE L2 2726 3154 -159 291 148 19 19 chr2 80972267 80972321 -169715533 + MLT1E LTR MaLR 1 54 -539 508 304 75 125 chr2 80972321 80972473 -169715381 + L2 LINE L2 3154 3312 -1 1907 161 23 37 chr2 80972671 80973020 -169714834 + MER2 DNA MER2_type 1 344 0 1268 309 33 38 chr2 80973298 80973819 -169714035 - MLT1E LTR MaLR -75 518 1 454 253 117 19 chr2 80973986 80974148 -169713706 - L1MC4a LINE L1 -1034 6774 6597 261 109 43 22 chr2 80974188 80974234 -169713620 - L1MC4a LINE L1 -1162 6646 6600 1165 256 81 68 chr2 80974253 80974652 -169713202 + L1MC5 LINE L1 6676 7069 -892 720 191 35 87 chr2 80974652 80974772 -169713082 + MER20 DNA MER1_type 1 105 -114 2464 48 0 0 chr2 80974772 80975064 -169712790 + AluY SINE Alu 1 292 -19 720 191 35 87 chr2 80975064 80975174 -169712680 + MER20 DNA MER1_type 105 219 0 1165 256 81 68 chr2 80975174 80975187 -169712667 + L1MC5 LINE L1 7069 7080 -881 1624 206 14 20 chr2 80975187 80975537 -169712317 + MER7A DNA MER2_type 1 346 0 1165 256 81 68 chr2 80975537 80975681 -169712173 + L1MC5 LINE L1 7080 7240 -721 489 257 87 62 chr2 80975743 80976179 -169711675 + L1MC5 LINE L1 7372 7818 -143 21 0 0 0 chr2 80976396 80976417 -169711437 + AT_rich Low_complexity Low_complexity 1 21 0 339 338 14 22 chr2 80976473 80976612 -169711242 - L1M4 LINE L1 -362 5816 5679 32 43 0 0 chr2 80977330 80977376 -169710478 + AT_rich Low_complexity Low_complexity 1 46 0 734 341 104 29 chr2 80978575 80979181 -169708673 + L2 LINE L2 1773 2475 -839 1852 138 13 13 chr2 80979181 80979479 -169708375 + AluSx SINE Alu 1 298 -14 734 341 104 29 chr2 80979479 80979801 -169708053 + L2 LINE L2 2475 2771 -543 1137 147 5 30 chr2 80979833 80980030 -169707824 + THE1C LTR MaLR 1 192 -183 186 103 0 0 chr2 80980079 80980108 -169707746 + (TC)n Simple_repeat Simple_repeat 1 29 0 336 48 0 0 chr2 80980153 80980195 -169707659 + (CA)n Simple_repeat Simple_repeat 1 42 0 210 71 0 0 chr2 80980195 80980223 -169707631 + (GA)n Simple_repeat Simple_repeat 1 28 0 208 339 74 16 chr2 80980280 80980329 -169707525 + L2 LINE L2 3136 3181 -91 2130 125 0 0 chr2 80980329 80980624 -169707230 - AluSc SINE Alu -14 295 1 208 339 74 16 chr2 80980624 80980695 -169707159 + L2 LINE L2 3181 3263 -9 2449 130 5 11 chr2 80981246 80981623 -169706231 + THE1C LTR MaLR 1 375 0 183 366 0 14 chr2 80982201 80982272 -169705582 + L2 LINE L2 3234 3303 -10 3360 158 21 24 chr2 80982681 80983134 -169704720 + L1MA8 LINE L1 5625 6077 -214 1887 149 3 10 chr2 80983134 80983429 -169704425 + AluSx SINE Alu 2 294 -18 3360 158 21 24 chr2 80983429 80983640 -169704214 + L1MA8 LINE L1 6077 6287 -4 922 200 14 47 chr2 80983707 80983751 -169704103 - MLT1A1 LTR MaLR -2 363 319 2265 170 102 55 chr2 80983751 80983788 -169704066 + MLT2B3 LTR ERVL 1 35 -519 2301 98 3 0 chr2 80983788 80984095 -169703759 + AluSp SINE Alu 1 308 -5 2265 170 102 55 chr2 80984095 80984586 -169703268 + MLT2B3 LTR ERVL 35 554 0 922 200 14 47 chr2 80984586 80984830 -169703024 - MLT1A1 LTR MaLR -46 319 3 3425 188 25 14 chr2 80985073 80985807 -169702047 - L1MB2 LINE L1 -2 6169 5428 748 144 0 0 chr2 80985821 80985946 -169701908 - L1PA13 LINE L1 -13 6150 6026 1700 138 25 0 chr2 80986050 80986333 -169701521 - AluY SINE Alu -21 290 1 469 247 15 36 chr2 80987398 80987628 -169700226 + T-rich Low_complexity Low_complexity 1 225 0 23 33 0 0 chr2 80987785 80987815 -169700039 + AT_rich Low_complexity Low_complexity 1 30 0 207 88 0 0 chr2 80987854 80987888 -169699966 + (TG)n Simple_repeat Simple_repeat 1 34 0 1309 219 21 7 chr2 80988172 80988237 -169699617 + AluJb SINE Alu 1 64 -248 1785 163 61 25 chr2 80988237 80988599 -169699255 - THE1C LTR MaLR 0 375 1 1309 219 21 7 chr2 80988599 80988820 -169699034 + AluJb SINE Alu 64 291 -21 1273 211 53 23 chr2 80989698 80990001 -169697853 - AluJb SINE Alu 0 312 1 22 56 0 0 chr2 80990332 80990368 -169697486 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr2 80990472 80990498 -169697356 + AT_rich Low_complexity Low_complexity 1 26 0 28 48 0 0 chr2 80990906 80990948 -169696906 + AT_rich Low_complexity Low_complexity 1 42 0 1898 118 11 0 chr2 80992004 80992275 -169695579 + AluSx SINE Alu 2 275 -37 757 283 11 0 chr2 80992617 80992804 -169695050 + MER20 DNA MER1_type 31 219 0 1725 113 79 0 chr2 80993204 80993498 -169694356 - AluY SINE Alu 0 311 1 27 29 0 0 chr2 80994069 80994103 -169693751 + AT_rich Low_complexity Low_complexity 1 34 0 29 47 0 0 chr2 80995275 80995318 -169692536 + AT_rich Low_complexity Low_complexity 1 43 0 2251 62 16 13 chr2 80996146 80996455 -169691399 - AluY SINE Alu 0 311 2 22 35 0 0 chr2 80996463 80996492 -169691362 + AT_rich Low_complexity Low_complexity 1 29 0 543 307 85 0 chr2 80997516 80997728 -169690126 - MIR SINE MIR -29 233 4 2298 57 7 3 chr2 80997885 80998181 -169689673 + AluY SINE Alu 1 297 -14 1304 269 56 66 chr2 80998606 80999272 -169688582 + HsTC2a DNA Tc2 82 740 -4 180 341 48 56 chr2 80999539 80999665 -169688189 - L2 LINE L2 -12 3260 3136 25 51 0 0 chr2 81000740 81000779 -169687075 + AT_rich Low_complexity Low_complexity 1 39 0 274 297 66 11 chr2 81000857 81000948 -169686906 - L2 LINE L2 0 3313 3218 756 331 99 66 chr2 81001221 81002358 -169685496 - L2 LINE L2 -410 2904 1730 23 0 0 0 chr2 81002765 81002788 -169685066 + AT_rich Low_complexity Low_complexity 1 23 0 2075 239 43 31 chr2 81003406 81004014 -169683840 - L1ME1 LINE L1 -92 6074 5460 * 2599 236 72 12 chr2 81004012 81004816 -169683038 - L1ME1 LINE L1 -923 5223 4372 22 0 0 0 chr2 81005152 81005174 -169682680 + AT_rich Low_complexity Low_complexity 1 22 0 1748 126 52 85 chr2 81005384 81005772 -169682082 - THE1C LTR MaLR 0 375 1 2464 58 3 13 chr2 81006137 81006450 -169681404 + AluY SINE Alu 1 310 -1 967 210 11 0 chr2 81006942 81007123 -169680731 + MER5A DNA MER1_type 3 185 -4 244 316 0 32 chr2 81007797 81007892 -169679962 + MIR SINE MIR 171 262 0 2358 94 7 0 chr2 81008140 81008448 -169679406 - AluSg SINE Alu 0 310 1 204 40 0 0 chr2 81009395 81009420 -169678434 + (A)n Simple_repeat Simple_repeat 1 25 0 804 298 33 16 chr2 81009912 81010154 -169677700 + MIR SINE MIR 17 262 0 396 0 0 0 chr2 81010422 81010466 -169677388 + (TC)n Simple_repeat Simple_repeat 1 44 0 333 0 0 0 chr2 81010466 81010503 -169677351 + (CA)n Simple_repeat Simple_repeat 1 37 0 348 24 0 0 chr2 81010907 81010948 -169676906 + (TG)n Simple_repeat Simple_repeat 2 42 0 1551 99 75 78 chr2 81011503 81011785 -169676069 + AluSp SINE Alu 1 281 -32 889 86 29 0 chr2 81011785 81011924 -169675930 + (GAAA)n Simple_repeat Simple_repeat 3 145 0 2246 118 0 3 chr2 81012827 81013140 -169674714 - AluSx SINE Alu 0 312 1 328 158 12 12 chr2 81013622 81013704 -169674150 + CT-rich Low_complexity Low_complexity 1 82 0 1493 196 0 30 chr2 81014358 81014654 -169673200 - AluJb SINE Alu -25 287 1 31 58 0 0 chr2 81015161 81015213 -169672641 + AT_rich Low_complexity Low_complexity 1 52 0 413 220 64 0 chr2 81015673 81015782 -169672072 + MER52A LTR ERV1 1 116 -1639 26 30 0 0 chr2 81016916 81016949 -169670905 + AT_rich Low_complexity Low_complexity 1 33 0 321 26 0 0 chr2 81017209 81017247 -169670607 + (CA)n Simple_repeat Simple_repeat 2 39 0 617 335 31 13 chr2 81017391 81017618 -169670236 + MIR SINE MIR 15 245 -17 598 274 86 5 chr2 81018033 81018219 -169669635 + MIR SINE MIR 59 259 -3 634 250 57 42 chr2 81018481 81018693 -169669161 - MER20 DNA MER1_type -4 215 1 2096 169 12 29 chr2 81020003 81020698 -169667156 - L1P4 LINE L1 -586 5580 4901 375 293 54 36 chr2 81021130 81021352 -169666502 - L1M4 LINE L1 -2113 4033 3808 45 34 0 0 chr2 81021510 81021569 -169666285 + AT_rich Low_complexity Low_complexity 1 59 0 26 50 0 0 chr2 81021610 81021650 -169666204 + AT_rich Low_complexity Low_complexity 1 40 0 23 33 0 0 chr2 81021798 81021828 -169666026 + AT_rich Low_complexity Low_complexity 1 30 0 1227 189 56 24 chr2 81021871 81022120 -169665734 - AluJo SINE Alu -12 300 44 1800 165 133 13 chr2 81022277 81022659 -169665195 - MSTA LTR MaLR 0 428 1 250 237 8 42 chr2 81022710 81022828 -169665026 + (CAAA)n Simple_repeat Simple_repeat 2 115 0 * 259 263 0 0 chr2 81022742 81022841 -169665013 + A-rich Low_complexity Low_complexity 1 99 0 628 303 119 68 chr2 81024082 81024611 -169663243 + LTR67 LTR ERVL 2 557 0 236 77 26 0 chr2 81024907 81024946 -169662908 + (TC)n Simple_repeat Simple_repeat 2 41 0 345 62 0 0 chr2 81024952 81025000 -169662854 + (CA)n Simple_repeat Simple_repeat 1 48 0 374 331 163 41 chr2 81026277 81026688 -169661166 - L2 LINE L2 -42 3271 2811 695 317 70 22 chr2 81026908 81027220 -169660634 - L2 LINE L2 -517 2797 2471 884 184 12 18 chr2 81027415 81027578 -169660276 + MER45A DNA AcHobo 17 178 0 2264 87 7 0 chr2 81028019 81028319 -169659535 - AluY SINE Alu -7 304 3 21 57 0 0 chr2 81028956 81028991 -169658863 + AT_rich Low_complexity Low_complexity 1 35 0 186 410 0 0 chr2 81029522 81029605 -169658249 + L2 LINE L2 3221 3303 -10 333 363 201 18 chr2 81029845 81031345 -169656509 + L2 LINE L2 277 2051 -1263 335 228 55 0 chr2 81031382 81031509 -169656345 + (TA)n Simple_repeat Simple_repeat 1 134 0 619 284 188 0 chr2 81031948 81032209 -169655645 - MLT1G LTR MaLR -37 553 244 1909 162 72 17 chr2 81032222 81032567 -169655287 + THE1B LTR MaLR 1 364 0 11100 88 21 3 chr2 81032567 81034119 -169653735 + THE1B-int LTR MaLR 1 1580 0 1595 172 95 15 chr2 81034119 81034456 -169653398 + THE1B LTR MaLR 1 364 0 2147 91 11 0 chr2 81035235 81035522 -169652332 - AluY SINE Alu -13 298 9 423 336 111 19 chr2 81037054 81037262 -169650592 - MIR SINE MIR -1 261 36 920 192 23 32 chr2 81037405 81037624 -169650230 - MER20 DNA MER1_type -1 218 2 258 268 113 0 chr2 81038125 81038196 -169649658 + MER20 DNA MER1_type 140 218 -1 36 91 0 0 chr2 81038836 81038935 -169648919 + AT_rich Low_complexity Low_complexity 1 99 0 25 31 0 0 chr2 81039389 81039421 -169648433 + AT_rich Low_complexity Low_complexity 1 32 0 401 338 82 50 chr2 81040652 81041241 -169646613 + L2 LINE L2 2451 3061 -252 336 291 0 43 chr2 81041256 81041373 -169646481 - L2 LINE L2 -604 2710 2599 25 31 0 0 chr2 81042454 81042486 -169645368 + AT_rich Low_complexity Low_complexity 1 32 0 279 0 0 0 chr2 81044488 81044519 -169643335 + (GA)n Simple_repeat Simple_repeat 1 31 0 376 271 59 0 chr2 81045011 81045129 -169642725 + L1ME4a LINE L1 3443 3567 -2579 23 0 0 0 chr2 81045820 81045843 -169642011 + AT_rich Low_complexity Low_complexity 1 23 0 1793 166 99 3 chr2 81046240 81046553 -169641301 - MER7A DNA MER2_type -5 341 1 486 190 35 9 chr2 81046807 81046923 -169640931 - MER33 DNA MER1_type -161 163 45 281 314 76 23 chr2 81047059 81047231 -169640623 + MER5A DNA MER1_type 4 184 -5 263 300 36 64 chr2 81047456 81047596 -169640258 + L2 LINE L2 3136 3271 -1 2012 126 27 0 chr2 81049027 81049320 -169638534 - AluSq SINE Alu -10 303 3 198 0 0 0 chr2 81049429 81049451 -169638403 + (TTG)n Simple_repeat Simple_repeat 3 24 0 24 0 0 0 chr2 81050191 81050215 -169637639 + AT_rich Low_complexity Low_complexity 1 24 0 237 162 29 44 chr2 81052032 81052100 -169635754 - L1MCa LINE L1 -4380 2046 1980 198 277 0 0 chr2 81052342 81052483 -169635371 + T-rich Low_complexity Low_complexity 1 141 0 2550 237 26 9 chr2 81052669 81053311 -169634543 - MER82 DNA MER2_type 0 653 1 279 331 76 6 chr2 81053422 81053579 -169634275 - MIR SINE MIR -58 204 37 1283 274 154 45 chr2 81055238 81056146 -169631708 + L2 LINE L2 2130 3143 -170 395 343 89 35 chr2 81058721 81059077 -169628777 - L1ME LINE L1 -458 5663 5295 232 237 17 0 chr2 81059911 81059970 -169627884 + L1ME4a LINE L1 4550 4609 -1537 229 281 36 79 chr2 81060585 81060724 -169627130 + L1ME4a LINE L1 5456 5588 -533 316 304 145 43 chr2 81060825 81061177 -169626677 + L1ME4a LINE L1 5733 6120 -1 28 0 0 0 chr2 81061590 81061618 -169626236 + AT_rich Low_complexity Low_complexity 1 28 0 3455 241 33 1 chr2 81061760 81062519 -169625335 + ERVL LTR ERVL 1433 2215 -3549 21 0 0 0 chr2 81062807 81062828 -169625026 + AT_rich Low_complexity Low_complexity 1 21 0 2201 108 0 13 chr2 81062982 81063296 -169624558 + AluSx SINE Alu 1 310 -2 253 330 93 36 chr2 81063738 81063932 -169623922 - MIR SINE MIR -45 217 13 1856 163 14 0 chr2 81066065 81066359 -169621495 - AluSx SINE Alu -13 299 2 21 0 0 0 chr2 81066471 81066492 -169621362 + AT_rich Low_complexity Low_complexity 1 21 0 273 218 0 0 chr2 81066541 81066619 -169621235 + (CA)n Simple_repeat Simple_repeat 1 78 0 23 0 0 0 chr2 81068087 81068110 -169619744 + AT_rich Low_complexity Low_complexity 1 23 0 287 167 20 29 chr2 81070000 81070102 -169617752 + GA-rich Low_complexity Low_complexity 3 103 0 23 33 0 0 chr2 81073327 81073357 -169614497 + AT_rich Low_complexity Low_complexity 1 30 0 323 211 56 0 chr2 81076999 81077070 -169610784 - MER63C DNA MER1_type -403 527 453 282 115 311 0 chr2 81077076 81077137 -169610717 + MADE1 DNA Mariner 1 80 0 901 190 38 0 chr2 81077141 81077325 -169610529 - MER63C DNA MER1_type -487 443 253 262 53 0 53 chr2 81077325 81077363 -169610491 - MER63C DNA MER1_type -893 37 2 200 300 78 11 chr2 81077679 81077769 -169610085 + L2 LINE L2 3218 3313 0 378 0 0 0 chr2 81078924 81078966 -169608888 + (CA)n Simple_repeat Simple_repeat 1 42 0 558 280 29 5 chr2 81078969 81079176 -169608678 - LTR8 LTR ERV1 -4 687 476 276 242 11 55 chr2 81081036 81081127 -169606727 + MIR SINE MIR 104 190 -72 5962 113 8 2 chr2 81081569 81082716 -169605138 + L1PA13 LINE L1 5004 6158 -5 206 292 0 0 chr2 81082744 81082792 -169605062 + (CA)n Simple_repeat Simple_repeat 1 48 0 694 339 38 0 chr2 81083559 81083798 -169604056 - MIR SINE MIR -3 259 12 3653 190 9 32 chr2 81084314 81085078 -169602776 + MER52A LTR ERV1 866 1755 0 711 52 0 0 chr2 81085421 81085517 -169602337 + L1PA3 LINE L1 6060 6155 0 180 0 0 0 chr2 81085537 81085557 -169602297 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 22 0 0 0 chr2 81086134 81086156 -169601698 + AT_rich Low_complexity Low_complexity 1 22 0 2129 130 0 0 chr2 81086472 81086780 -169601074 + AluSx SINE Alu 1 308 -4 207 114 0 0 chr2 81087583 81087618 -169600236 + (GA)n Simple_repeat Simple_repeat 2 36 0 302 282 111 67 chr2 81087740 81088038 -169599816 + HAL1b LINE L1 75 385 -963 34 65 0 0 chr2 81088120 81088182 -169599672 + AT_rich Low_complexity Low_complexity 1 62 0 22 70 0 0 chr2 81088477 81088520 -169599334 + AT_rich Low_complexity Low_complexity 1 43 0 23 54 0 0 chr2 81088557 81088594 -169599260 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 81088628 81088657 -169599197 + AT_rich Low_complexity Low_complexity 1 29 0 1535 213 7 0 chr2 81088761 81089062 -169598792 - AluJo SINE Alu -9 303 1 21 0 0 0 chr2 81089355 81089376 -169598478 + AT_rich Low_complexity Low_complexity 1 21 0 369 311 19 58 chr2 81089458 81089718 -169598136 + L1M4 LINE L1 2800 3049 -3097 2702 275 49 23 chr2 81090547 81091736 -169596118 - L1M4 LINE L1 -1943 4203 2984 244 315 0 0 chr2 81091882 81091971 -169595883 - L1MC4 LINE L1 -1342 6936 6848 274 357 71 31 chr2 81092131 81092355 -169595499 - MIR SINE MIR 0 262 30 628 253 45 45 chr2 81093345 81093543 -169594311 + MER20 DNA MER1_type 2 199 -20 23 0 0 0 chr2 81094846 81094869 -169592985 + AT_rich Low_complexity Low_complexity 1 23 0 29 47 0 0 chr2 81095416 81095459 -169592395 + AT_rich Low_complexity Low_complexity 1 43 0 231 250 52 10 chr2 81095604 81095700 -169592154 + (CATATA)n Simple_repeat Simple_repeat 1 100 0 33 43 0 0 chr2 81095912 81095959 -169591895 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 0 chr2 81096399 81096422 -169591432 + AT_rich Low_complexity Low_complexity 1 23 0 615 283 27 49 chr2 81146579 81146802 -169541052 - MER58A DNA MER1_type -5 219 2 287 266 16 0 chr2 81146897 81146961 -169540893 + L1M4b LINE L1 19 83 -6776 1380 147 18 5 chr2 81147128 81147352 -169540502 + MER61B LTR ERV1 199 425 0 1698 266 142 4 chr2 81147352 81147818 -169540036 + L1M4b LINE L1 124 653 -6206 243 282 115 0 chr2 81148294 81148372 -169539482 - L1MC4 LINE L1 -2212 5832 5746 203 57 19 57 chr2 81148774 81148827 -169539027 + (TA)n Simple_repeat Simple_repeat 1 51 0 218 112 67 11 chr2 81148943 81149032 -169538822 + (TA)n Simple_repeat Simple_repeat 2 95 0 753 174 26 63 chr2 81149032 81149222 -169538632 + L1MA9 LINE L1 5759 5941 -371 3536 279 37 38 chr2 81149333 81151012 -169536842 - L1MC4 LINE L1 -1098 5284 3607 2135 133 0 0 chr2 81151324 81151626 -169536228 - AluSq SINE Alu -11 302 1 221 330 126 39 chr2 81151659 81151762 -169536092 + L2 LINE L2 3161 3272 0 31 26 0 0 chr2 81151974 81152012 -169535842 + AT_rich Low_complexity Low_complexity 1 38 0 195 188 0 0 chr2 81152679 81152727 -169535127 + (TA)n Simple_repeat Simple_repeat 1 48 0 407 339 58 25 chr2 81152836 81153110 -169534744 - L1M4 LINE L1 -2446 3700 3418 2051 129 0 7 chr2 81153118 81153421 -169534433 + AluSx SINE Alu 1 301 -11 28 29 0 0 chr2 81153692 81153727 -169534127 + AT_rich Low_complexity Low_complexity 1 35 0 1242 132 101 0 chr2 81153899 81154127 -169533727 + L1PA13 LINE L1 5908 6158 -5 440 320 74 55 chr2 81154505 81155064 -169532790 - L1MC4 LINE L1 -4432 1990 1263 1967 169 60 38 chr2 81156104 81156523 -169531331 - MSTC LTR MaLR 0 428 1 1672 28 0 14 chr2 81156631 81156842 -169531012 + L1PA2 LINE L1 5948 6155 0 1718 185 0 3 chr2 81157584 81157876 -169529978 - AluJo SINE Alu -7 305 15 40 59 0 0 chr2 81157922 81157990 -169529864 + AT_rich Low_complexity Low_complexity 1 68 0 258 201 34 0 chr2 81158060 81158136 -169529718 + L1M4 LINE L1 3506 3588 -2558 227 213 173 0 chr2 81158775 81158850 -169529004 - L1ME LINE L1 -472 5649 5562 25 31 0 0 chr2 81159203 81159235 -169528619 + AT_rich Low_complexity Low_complexity 1 32 0 634 272 27 45 chr2 81159766 81159990 -169527864 - MER58A DNA MER1_type -3 221 2 353 250 14 0 chr2 81160077 81160149 -169527705 + L1M4 LINE L1 11 83 -6776 1416 138 18 5 chr2 81160316 81160540 -169527314 + MER61B LTR ERV1 199 425 0 1735 260 142 4 chr2 81160540 81161006 -169526848 + L1M4 LINE L1 124 653 -6206 469 311 84 22 chr2 81161168 81161441 -169526413 + L1M4 LINE L1 3955 4244 -2713 346 218 50 10 chr2 81161441 81161542 -169526312 + L1ME4a LINE L1 5815 5919 -251 3114 100 2 2 chr2 81161810 81162271 -169525583 + L1PA6 LINE L1 5698 6158 0 436 218 82 0 chr2 81162275 81162385 -169525469 + L1ME4a LINE L1 6000 6118 -3 2826 3 0 0 chr2 81162523 81162832 -169525022 + AluYa5 SINE Alu 1 309 -2 1223 256 65 27 chr2 81162882 81163362 -169524492 - L1ME LINE L1 -1275 4871 4374 1045 117 0 0 chr2 81163370 81163524 -169524330 - AluY SINE Alu -5 306 153 236 308 65 34 chr2 81163528 81163849 -169524005 - L1ME LINE L1 -2930 3216 2886 2141 133 3 25 chr2 81164413 81164773 -169523081 + L1PA16 LINE L1 5806 6157 -9 759 143 0 0 chr2 81165106 81165218 -169522636 + AluJb SINE Alu 3 114 -198 2121 188 62 5 chr2 81165903 81166292 -169521562 - MSTB LTR MaLR -13 413 3 1577 243 61 43 chr2 81167039 81167532 -169520322 + MLT1H1 LTR MaLR 1 502 -53 2417 79 3 0 chr2 81167931 81168236 -169519618 - AluY SINE Alu -3 308 3 201 294 0 0 chr2 81168626 81168677 -169519177 - L3 LINE CR1 -221 1356 1306 22 0 0 0 chr2 81168809 81168831 -169519023 + AT_rich Low_complexity Low_complexity 1 22 0 2345 248 30 23 chr2 81169320 81170055 -169517799 - L1MC4a LINE L1 -14 7794 7055 2430 138 22 78 chr2 81170362 81170978 -169516876 - MER4E LTR ERV1 -2 777 1 275 224 60 0 chr2 81170979 81171046 -169516808 - L1MD3 LINE L1 -1004 6991 6921 331 318 9 0 chr2 81171079 81171189 -169516665 - L1MC4 LINE L1 -1422 6620 6510 1112 180 69 5 chr2 81171222 81171439 -169516415 + LOR1b LTR ERV1 1 231 -230 1211 220 143 37 chr2 81171444 81171784 -169516070 - MER84 LTR ERVI -5 502 101 1987 101 3 83 chr2 81171784 81172122 -169515732 - AluSq SINE Alu -2 311 1 1211 220 143 37 chr2 81172122 81172235 -169515619 - MER84 LTR ERVI -406 101 1 1426 141 8 13 chr2 81172237 81172471 -169515383 + LOR1a LTR ERV1 265 497 0 232 261 64 64 chr2 81172475 81172865 -169514989 - L1MEc LINE L1 -1349 4866 4477 1242 161 83 0 chr2 81172911 81173153 -169514701 + MER4E LTR ERV1 1 262 -504 236 137 59 0 chr2 81173400 81173451 -169514403 - L1MEc LINE L1 -1716 4499 4446 5158 76 42 25 chr2 81173469 81174046 -169513808 + MER4E LTR ERV1 1 596 -170 4640 57 7 0 chr2 81174046 81174629 -169513225 + LTR14C LTR ERVK 1 587 0 5158 76 42 25 chr2 81174629 81174804 -169513050 + MER4E LTR ERV1 596 766 0 1057 335 30 12 chr2 81174810 81174938 -169512916 - L1MEc LINE L1 -1794 4421 4297 1318 239 32 101 chr2 81174938 81175335 -169512519 - LTR9 LTR ERV1 0 612 276 1737 177 3 6 chr2 81175335 81175646 -169512208 + AluSx SINE Alu 3 312 0 1318 239 32 101 chr2 81175646 81175905 -169511949 - LTR9 LTR ERV1 -336 276 1 1057 335 30 12 chr2 81175905 81176447 -169511407 - L1MEc LINE L1 -1918 4297 3739 6663 71 21 0 chr2 81176935 81178941 -169508913 + L1PA7 LINE L1 4051 6154 0 508 305 74 58 chr2 81178950 81179383 -169508471 - L1MEc LINE L1 -2982 3233 2794 1400 209 13 29 chr2 81179400 81179706 -169508148 + AluJo SINE Alu 1 301 -1 2221 244 80 11 chr2 81179869 81180952 -169506902 - L1MEc LINE L1 -3412 2803 1684 2070 266 59 24 chr2 81180970 81181681 -169506173 - L1MEc LINE L1 -5627 769 34 22 56 0 0 chr2 81182182 81182218 -169505636 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 81182427 81182450 -169505404 + AT_rich Low_complexity Low_complexity 1 23 0 41943 39 22 1 chr2 81182522 81188399 -169499455 + L1PA3 LINE L1 22 6024 -131 1013 222 103 47 chr2 81188509 81188937 -169498917 - LTR24B LTR ERV1 -50 526 75 486 303 63 44 chr2 81189021 81189292 -169498562 - HAL1 LINE L1 -1142 1365 1090 351 0 0 0 chr2 81189401 81189440 -169498414 + (TG)n Simple_repeat Simple_repeat 1 39 0 4239 65 154 0 chr2 81190236 81190832 -169497022 - LTR12 LTR ERV1 0 688 1 2210 108 0 3 chr2 81190976 81191273 -169496581 + AluSg1 SINE Alu 7 302 -7 23 0 0 0 chr2 81192212 81192235 -169495619 + AT_rich Low_complexity Low_complexity 1 23 0 711 179 24 6 chr2 81193203 81193371 -169494483 + CT-rich Low_complexity Low_complexity 3 173 0 465 125 12 12 chr2 81193371 81193451 -169494403 + (TTTTC)n Simple_repeat Simple_repeat 4 83 0 569 202 42 0 chr2 81193451 81193619 -169494235 + CT-rich Low_complexity Low_complexity 2 176 0 233 0 94 0 chr2 81193632 81193664 -169494190 + T-rich Low_complexity Low_complexity 2 36 0 189 0 0 0 chr2 81193664 81193685 -169494169 + (CCTTG)n Simple_repeat Simple_repeat 4 24 0 1566 199 10 0 chr2 81193685 81193991 -169493863 - AluJo SINE Alu -3 309 1 2049 179 29 31 chr2 81194475 81195034 -169492820 + MLT2A2 LTR ERVL 1 554 0 1252 145 40 4 chr2 81198604 81198853 -169489001 - L1MA3 LINE L1 0 6305 6048 199 53 26 26 chr2 81198902 81198940 -169488914 + (TA)n Simple_repeat Simple_repeat 1 38 0 1506 197 65 22 chr2 81199043 81199378 -169488476 + MSTD LTR MaLR 1 313 -52 3778 131 24 5 chr2 81199400 81200058 -169487796 - L1MA2 LINE L1 0 7723 7053 4160 183 44 5 chr2 81200159 81201026 -169486828 - L1MA2 LINE L1 -776 6789 5889 4851 190 63 17 chr2 81201026 81201770 -169486084 - L1MA2 LINE L1 -2550 5015 4307 2184 92 0 3 chr2 81201770 81202124 -169485730 - AluY SINE Alu 0 353 1 4851 190 63 17 chr2 81202124 81202679 -169485175 - L1MA2 LINE L1 -3258 4307 3779 318 26 0 0 chr2 81202679 81202718 -169485136 + (TG)n Simple_repeat Simple_repeat 2 40 0 4851 190 63 17 chr2 81202718 81203627 -169484227 - L1MA2 LINE L1 -3786 3779 2643 2156 200 9 4 chr2 81203627 81204081 -169483773 + L1P LINE L1 4824 5279 -867 640 168 0 0 chr2 81204186 81204305 -169483549 + L1P LINE L1 5222 5340 -806 345 247 39 0 chr2 81204306 81204383 -169483471 + FRAM SINE Alu 68 147 -19 2511 218 56 29 chr2 81204440 81205368 -169482486 + MER57-int LTR ERV1 1093 1923 -3013 347 246 29 62 chr2 81205370 81205561 -169482293 + MER57-int LTR ERV1 1560 4012 -3525 4277 157 18 6 chr2 81205561 81206274 -169481580 + MER50 LTR ERV1 1 722 -12 11044 157 12 21 chr2 81206274 81208136 -169479718 + MER50-int LTR ERV1 7 1850 -5355 5533 214 35 47 chr2 81208132 81209464 -169478390 + MER50-int LTR ERV1 2788 4104 -3101 * 6487 168 5 1 chr2 81209455 81210478 -169477376 + MER50-int LTR ERV1 6174 7200 -5 2911 186 39 6 chr2 81210479 81211129 -169476725 + MER50 LTR ERV1 10 711 -23 484 224 80 0 chr2 81211277 81211463 -169476391 + FLAM_C SINE Alu 7 202 0 * 795 153 21 20 chr2 81211451 81211699 -169476155 + GA-rich Low_complexity Low_complexity 1 248 0 217 48 71 0 chr2 81211889 81211931 -169475923 + A-rich Low_complexity Low_complexity 1 45 0 3468 240 59 41 chr2 81211931 81213402 -169474452 - L1M4 LINE L1 -1948 4198 2701 237 362 0 0 chr2 81213635 81213729 -169474125 + MIR SINE MIR 48 141 -121 27 29 0 0 chr2 81214526 81214560 -169473294 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 81215326 81215348 -169472506 + AT_rich Low_complexity Low_complexity 1 22 0 6218 27 8 0 chr2 81215870 81216618 -169471236 - L1PA3 LINE L1 -1156 4990 4237 7710 19 0 1 chr2 81216618 81217868 -169469986 + L1PA3 LINE L1 4989 6237 0 21 0 0 0 chr2 81217930 81217951 -169469903 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr2 81218441 81218466 -169469388 + (T)n Simple_repeat Simple_repeat 1 25 0 28 29 0 0 chr2 81218893 81218928 -169468926 + AT_rich Low_complexity Low_complexity 1 35 0 787 184 7 33 chr2 81219061 81219268 -169468586 + FRAM SINE Alu 1 203 0 26 64 0 0 chr2 81221345 81221392 -169466462 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr2 81221562 81221591 -169466263 + AT_rich Low_complexity Low_complexity 1 29 0 339 341 90 51 chr2 81222673 81223028 -169464826 + HAL1 LINE L1 1163 1531 -976 379 200 8 80 chr2 81223057 81223182 -169464672 + L1MEd LINE L1 22 137 -5982 428 376 60 23 chr2 81223434 81223870 -169463984 + HAL1 LINE L1 1230 1681 -826 4728 317 85 19 chr2 81224127 81226670 -169461184 + L2 LINE L2 564 3313 0 464 278 42 65 chr2 81227020 81227171 -169460683 + L2 LINE L2 3103 3249 -64 1851 139 0 0 chr2 81227171 81227437 -169460417 - AluSg SINE Alu -3 307 42 464 278 42 65 chr2 81227437 81227501 -169460353 + L2 LINE L2 3249 3313 0 1501 145 87 4 chr2 81228029 81228305 -169459549 + MER4B LTR ERV1 1 299 -311 460 274 112 70 chr2 81228551 81228766 -169459088 + LTR33A LTR ERVL 87 310 -213 264 271 0 0 chr2 81228829 81228899 -169458955 + LTR33A LTR ERVL 404 473 -50 203 200 0 22 chr2 81230525 81230570 -169457284 + (TATG)n Simple_repeat Simple_repeat 1 44 0 362 386 29 0 chr2 81230697 81230868 -169456986 - L2 LINE L2 -378 2936 2761 23 68 0 0 chr2 81231168 81231212 -169456642 + AT_rich Low_complexity Low_complexity 1 44 0 29 60 0 0 chr2 81231750 81231800 -169456054 + AT_rich Low_complexity Low_complexity 1 50 0 27 49 0 0 chr2 81231947 81231988 -169455866 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr2 81233363 81233386 -169454468 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 81234807 81234837 -169453017 + AT_rich Low_complexity Low_complexity 1 30 0 889 128 39 25 chr2 81235532 81235816 -169452038 + GA-rich Low_complexity Low_complexity 1 288 0 6514 162 39 13 chr2 81235924 81236559 -169451295 + LTR49-int LTR ERV1 4395 5012 -1319 210 37 0 0 chr2 81236559 81236586 -169451268 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6514 162 39 13 chr2 81236586 81237188 -169450666 + LTR49-int LTR ERV1 5012 5664 -667 1931 145 28 3 chr2 81237292 81237616 -169450238 + LTR24B LTR ERV1 8 339 -237 594 205 8 0 chr2 81237616 81237733 -169450121 + AluJo SINE Alu 3 120 -192 991 98 0 0 chr2 81237745 81237877 -169449977 - AluY SINE Alu -179 132 1 947 206 0 0 chr2 81237899 81238069 -169449785 + AluJo SINE Alu 129 298 -14 1372 171 0 0 chr2 81238086 81238331 -169449523 + LTR24B LTR ERV1 325 569 -7 451 305 87 0 chr2 81238383 81238565 -169449289 - MIR SINE MIR -46 216 19 2094 99 14 0 chr2 81238743 81239078 -169448776 - AluSp SINE Alu 0 340 2 733 220 25 0 chr2 81240333 81240492 -169447362 - MER5A DNA MER1_type -1 188 26 338 274 154 40 chr2 81240607 81240782 -169447072 + MER77 LTR ERV1 177 371 -234 16538 44 1 0 chr2 81240798 81242871 -169444983 + L1P LINE L1 2339 4414 -1732 220 195 0 0 chr2 81243250 81243291 -169444563 + (CA)n Simple_repeat Simple_repeat 2 42 0 595 273 196 5 chr2 81244021 81244230 -169443624 + MIR SINE MIR 8 256 -6 30 45 0 0 chr2 81245648 81245692 -169442162 + AT_rich Low_complexity Low_complexity 1 44 0 185 132 132 0 chr2 81245750 81245788 -169442066 + MIR SINE MIR 132 174 -88 22 35 0 0 chr2 81245981 81246010 -169441844 + AT_rich Low_complexity Low_complexity 1 29 0 187 269 77 39 chr2 81247663 81247767 -169440087 - MIR SINE MIR -36 226 119 2823 292 85 19 chr2 81248765 81250739 -169437115 + L1ME LINE L1 3163 5304 -858 1471 205 39 3 chr2 81250739 81251022 -169436832 + AluJb SINE Alu 1 293 -19 2823 292 85 19 chr2 81251022 81251260 -169436594 + L1ME LINE L1 5304 5525 -637 2141 128 17 8 chr2 81251446 81251797 -169436057 - THE1A LTR MaLR 0 355 2 3444 100 77 0 chr2 81251798 81252289 -169435565 - THE1A-int LTR MaLR 0 1580 1052 4505 115 36 7 chr2 81252390 81253092 -169434762 - THE1A-int LTR MaLR -858 722 1 1387 105 5 38 chr2 81253092 81253302 -169434552 - THE1A LTR MaLR 0 355 153 2448 73 3 0 chr2 81253302 81253605 -169434249 + AluY SINE Alu 1 304 -7 3427 165 27 17 chr2 81253605 81254206 -169433648 + MER50 LTR ERV1 128 734 0 7377 210 19 31 chr2 81254216 81254625 -169433229 + MER50-int LTR ERV1 11 423 -6782 488 115 0 26 chr2 81254625 81254703 -169433151 - MADE1 DNA Mariner 0 80 5 7377 210 19 31 chr2 81254703 81255701 -169432153 + MER50-int LTR ERV1 423 1401 -5804 4166 151 17 21 chr2 81255701 81256415 -169431439 + MER50 LTR ERV1 1 711 -23 866 113 0 45 chr2 81256415 81256511 -169431343 + Tigger3(Golem) DNA MER2_type 2886 2976 -62 2254 96 79 18 chr2 81256511 81256854 -169431000 + THE1B LTR MaLR 1 364 0 866 113 0 45 chr2 81256854 81256890 -169430964 + Tigger3(Golem) DNA MER2_type 2976 3012 -26 252 274 0 24 chr2 81257300 81257384 -169430470 + (TATG)n Simple_repeat Simple_repeat 4 85 0 2084 94 3 19 chr2 81257550 81257891 -169429963 + L1PA13 LINE L1 5840 6175 0 536 208 8 16 chr2 81258123 81258248 -169429606 + L1MA9 LINE L1 6119 6242 -70 1120 140 56 5 chr2 81258270 81258484 -169429370 + L1MA9 LINE L1 6088 6312 0 21 0 0 0 chr2 81259023 81259044 -169428810 + AT_rich Low_complexity Low_complexity 1 21 0 710 282 56 5 chr2 81259489 81259702 -169428152 - MER58A DNA MER1_type 0 224 1 36 23 0 0 chr2 81259753 81259796 -169428058 + AT_rich Low_complexity Low_complexity 1 43 0 2235 125 40 14 chr2 81259881 81260232 -169427622 + THE1B LTR MaLR 1 360 -4 10884 111 20 0 chr2 81260232 81261777 -169426077 + THE1B-int LTR MaLR 2 1580 0 2244 142 28 17 chr2 81261777 81262137 -169425717 + THE1B LTR MaLR 1 364 0 2434 75 0 0 chr2 81263506 81263801 -169424053 - AluY SINE Alu -16 295 1 318 378 111 18 chr2 81263975 81264361 -169423493 + L2 LINE L2 1986 2407 -907 2006 141 0 3 chr2 81264442 81264746 -169423108 - AluY SINE Alu -8 303 1 5164 209 124 76 chr2 81264930 81265773 -169422081 - MER52A LTR ERV1 0 1755 954 1988 130 17 13 chr2 81265773 81266073 -169421781 - AluSg SINE Alu -9 301 1 5164 209 124 76 chr2 81266073 81266858 -169420996 - MER52A LTR ERV1 -801 954 49 507 195 8 57 chr2 81267091 81267214 -169420640 + AluJb SINE Alu 13 129 -183 591 56 64 28 chr2 81267225 81267479 -169420375 + (TA)n Simple_repeat Simple_repeat 1 263 0 297 193 0 0 chr2 81267663 81267720 -169420134 - MER5B DNA MER1_type 0 178 122 233 307 29 44 chr2 81267851 81267988 -169419866 + MLT1J LTR MaLR 230 364 -147 22 0 0 0 chr2 81268031 81268053 -169419801 + AT_rich Low_complexity Low_complexity 1 22 0 486 365 75 59 chr2 81269598 81270154 -169417700 + HAL1 LINE L1 83 647 -1860 356 268 57 67 chr2 81270366 81270560 -169417294 + HAL1 LINE L1 2309 2500 -7 1622 185 0 27 chr2 81270879 81271176 -169416678 - AluJo SINE Alu -23 289 1 489 292 94 74 chr2 81271409 81271844 -169416010 + MLT1J2 LTR MaLR 3 446 0 246 146 37 0 chr2 81272265 81272347 -169415507 + (TA)n Simple_repeat Simple_repeat 1 85 0 1892 157 0 7 chr2 81272347 81272647 -169415207 - AluJo SINE Alu -9 303 6 1938 150 3 0 chr2 81272966 81273259 -169414595 - AluSx SINE Alu -18 294 1 364 277 109 40 chr2 81274312 81274514 -169413340 - MIR SINE MIR -11 251 36 22 35 0 0 chr2 81274584 81274613 -169413241 + AT_rich Low_complexity Low_complexity 1 29 0 369 178 109 10 chr2 81274657 81274758 -169413096 - Charlie7 DNA MER1_type -1076 1536 1426 632 356 94 32 chr2 81274941 81275090 -169412764 - L2 LINE L2 -338 2976 2838 2386 157 11 18 chr2 81275090 81275537 -169412317 - MER65A LTR ERV1 -1 444 1 632 356 94 32 chr2 81275537 81276178 -169411676 - L2 LINE L2 -476 2838 2137 198 0 0 0 chr2 81276868 81276890 -169410964 + (TG)n Simple_repeat Simple_repeat 1 22 0 356 169 17 0 chr2 81276909 81276968 -169410886 - MER8 DNA MER2_type 0 239 180 1459 155 57 86 chr2 81276989 81277375 -169410479 + THE1C LTR MaLR 1 375 0 647 318 12 0 chr2 81277403 81277576 -169410278 - MER8 DNA MER2_type -64 175 1 298 259 0 37 chr2 81277662 81277743 -169410111 - MIR SINE MIR 0 262 185 4440 107 175 100 chr2 81277750 81279197 -169408657 + pTR5 LTR ERV1 743 2438 0 207 342 39 65 chr2 81279207 81279362 -169408492 - MIR SINE MIR -88 174 24 6484 41 75 2 chr2 81280839 81282075 -169405779 + L1PA5 LINE L1 4856 6152 -2 438 250 0 98 chr2 81282127 81282291 -169405563 + MER77 LTR ERV1 443 590 -15 221 250 0 42 chr2 81282444 81282516 -169405338 + GA-rich Low_complexity Low_complexity 1 69 0 1536 214 30 6 chr2 81282588 81282924 -169404930 + MER2 DNA MER2_type 1 344 0 4866 220 34 24 chr2 81284473 81285150 -169402704 + L1MC1 LINE L1 4431 5100 -1233 2155 104 0 4 chr2 81285150 81285430 -169402424 - AluSg SINE Alu -29 281 3 4866 220 34 24 chr2 81285430 81286632 -169401222 + L1MC1 LINE L1 5100 6324 -9 309 51 0 0 chr2 81286653 81286692 -169401162 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 243 212 45 0 chr2 81286812 81286878 -169400976 + L1MC4 LINE L1 7095 7163 -879 926 284 99 21 chr2 81286899 81287507 -169400347 + L1MC4 LINE L1 7269 7923 -119 221 217 0 14 chr2 81287555 81287624 -169400230 + GA-rich Low_complexity Low_complexity 2 69 0 23 105 0 0 chr2 81287829 81287915 -169399939 + AT_rich Low_complexity Low_complexity 1 86 0 727 179 0 62 chr2 81288340 81288485 -169399369 - AluJo SINE Alu -176 136 1 2017 150 3 6 chr2 81289084 81289397 -169398457 + AluSx SINE Alu 1 312 0 25 0 0 0 chr2 81290308 81290333 -169397521 + AT_rich Low_complexity Low_complexity 1 25 0 686 200 6 81 chr2 81290638 81290798 -169397056 - FRAM SINE Alu -14 152 5 23 33 0 0 chr2 81290921 81290951 -169396903 + AT_rich Low_complexity Low_complexity 1 30 0 325 323 69 54 chr2 81290968 81291302 -169396552 + L1ME LINE L1 5461 5799 -322 2345 123 55 26 chr2 81291484 81291900 -169395954 + MSTA LTR MaLR 1 428 0 9001 178 20 16 chr2 81291900 81293488 -169394366 + MSTA-int LTR MaLR 1 1598 -53 1599 196 58 6 chr2 81293488 81293814 -169394040 + MER61A LTR ERV1 1 343 0 9001 178 20 16 chr2 81293814 81293869 -169393985 + MSTA-int LTR MaLR 1598 1651 0 2119 124 67 43 chr2 81293869 81294287 -169393567 + MSTA LTR MaLR 1 428 0 27 29 0 0 chr2 81294358 81294392 -169393462 + AT_rich Low_complexity Low_complexity 1 34 0 22 80 0 0 chr2 81294610 81294660 -169393194 + AT_rich Low_complexity Low_complexity 1 50 0 1086 234 70 49 chr2 81294705 81295133 -169392721 - LTR56 LTR ERV1 0 445 9 1264 188 15 83 chr2 81295245 81295581 -169392273 + MER41C LTR ERV1 1 313 -241 227 250 0 62 chr2 81295592 81295688 -169392166 + L1MC4 LINE L1 6614 6703 -1339 638 278 130 32 chr2 81296219 81296860 -169390994 - L1ME3A LINE L1 -237 5929 5263 384 355 70 20 chr2 81296868 81297223 -169390631 - L1ME3A LINE L1 -891 5255 4883 457 257 188 0 chr2 81297334 81297478 -169390376 + MER5A DNA MER1_type 12 182 -7 201 167 56 0 chr2 81298139 81298193 -169389661 + (TA)n Simple_repeat Simple_repeat 2 58 0 25 0 0 0 chr2 81298682 81298707 -169389147 + AT_rich Low_complexity Low_complexity 1 25 0 26 50 0 0 chr2 81299124 81299164 -169388690 + AT_rich Low_complexity Low_complexity 1 40 0 859 180 46 141 chr2 81300093 81300376 -169387478 - MLT1B LTR MaLR -161 229 3 2297 113 33 28 chr2 81301476 81301838 -169386016 + THE1B LTR MaLR 1 364 0 864 215 76 22 chr2 81301852 81302075 -169385779 + MER41C LTR ERV1 319 553 -1 303 28 0 0 chr2 81302253 81302289 -169385565 + (TG)n Simple_repeat Simple_repeat 2 37 0 36 40 0 0 chr2 81302763 81302813 -169385041 + AT_rich Low_complexity Low_complexity 1 50 0 1698 172 56 14 chr2 81302939 81303299 -169384555 - THE1C LTR MaLR 0 375 1 29 28 0 0 chr2 81304047 81304083 -169383771 + AT_rich Low_complexity Low_complexity 1 36 0 1261 240 58 74 chr2 81304306 81304442 -169383412 + MER110 LTR ERV1 1 138 -353 1725 88 0 9 chr2 81304442 81304670 -169383184 - AluY SINE Alu -13 298 73 1261 240 58 74 chr2 81304670 81305017 -169382837 + MER110 LTR ERV1 138 476 -15 188 309 59 59 chr2 81305197 81305333 -169382521 + L2 LINE L2 2348 2483 -831 950 219 127 55 chr2 81305425 81305950 -169381904 + LTR49 LTR ERV1 1 516 -79 723 145 69 41 chr2 81305985 81306130 -169381724 - FRAM SINE Alu -16 160 12 336 179 48 60 chr2 81306141 81306225 -169381629 + LTR48 LTR ERV1 703 785 -2 2581 35 0 13 chr2 81306241 81306552 -169381302 + AluY SINE Alu 1 307 -4 457 353 103 33 chr2 81306552 81306912 -169380942 + L2 LINE L2 2589 2973 -341 236 194 83 0 chr2 81306941 81307013 -169380841 - MER67C LTR ERV1 -5 705 628 25 51 0 0 chr2 81307603 81307642 -169380212 + AT_rich Low_complexity Low_complexity 1 39 0 824 169 0 0 chr2 81307642 81307766 -169380088 - FLAM_C SINE Alu -7 126 3 1796 215 113 20 chr2 81307935 81308395 -169379459 - MER101B LTR ERV1 -67 503 1 1960 150 0 0 chr2 81310851 81311145 -169376709 - AluSx SINE Alu -18 294 1 875 143 22 11 chr2 81311151 81311333 -169376521 - L1MA6 LINE L1 -5 6295 6112 332 265 10 10 chr2 81311897 81311995 -169375859 - L1MC3 LINE L1 -12 7773 7676 545 200 166 0 chr2 81311998 81312143 -169375711 - MLT1D LTR MaLR 0 505 337 * 1817 147 3 99 chr2 81312140 81312296 -169375558 - MER1B DNA MER1_type -2373 339 238 5740 44 6 1 chr2 81312296 81313002 -169374852 - L1PA5 LINE L1 -2 6152 5444 1817 147 3 99 chr2 81313002 81313220 -169374634 - MER1B DNA MER1_type -2474 238 1 1333 188 39 65 chr2 81313220 81313555 -169374299 - MLT1D LTR MaLR -158 347 22 2055 316 92 38 chr2 81313760 81315061 -169372793 + L2 LINE L2 1943 3313 0 248 169 13 0 chr2 81316068 81316145 -169371709 + (TA)n Simple_repeat Simple_repeat 1 78 0 629 376 112 6 chr2 81316155 81316511 -169371343 + L2 LINE L2 117 510 -2804 25 51 0 0 chr2 81316869 81316908 -169370946 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr2 81318978 81319003 -169368851 + AT_rich Low_complexity Low_complexity 1 25 0 187 404 53 0 chr2 81319353 81319447 -169368407 - L2 LINE L2 -253 3019 2921 1528 234 28 30 chr2 81319568 81319965 -169367889 + MSTD LTR MaLR 1 396 0 305 225 75 25 chr2 81320100 81320220 -169367634 + L1MDa LINE L1 2522 2647 -3893 1047 130 108 5 chr2 81320249 81320434 -169367420 - MER41C LTR ERV1 0 554 351 924 247 82 20 chr2 81320436 81320828 -169367026 + L1MDa LINE L1 4170 4585 -1955 3020 231 53 41 chr2 81320850 81321442 -169366412 + L1MD2 LINE L1 4026 4609 -1750 212 0 36 0 chr2 81321442 81321470 -169366384 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3020 231 53 41 chr2 81321470 81321708 -169366146 + L1MD2 LINE L1 4609 4843 -1516 1335 214 16 46 chr2 81321708 81322012 -169365842 - AluJo SINE Alu -13 299 5 3020 231 53 41 chr2 81322012 81323077 -169364777 + L1MD2 LINE L1 4843 5947 -412 1955 218 11 54 chr2 81323079 81323281 -169364573 + L1MD1 LINE L1 5713 5922 -320 228 35 0 0 chr2 81323281 81323310 -169364544 + (TA)n Simple_repeat Simple_repeat 2 30 0 1914 149 7 0 chr2 81323310 81323606 -169364248 - AluSq SINE Alu -15 298 1 1955 218 11 54 chr2 81323606 81323939 -169363915 + L1MD1 LINE L1 5920 6226 -16 272 284 0 14 chr2 81324599 81324673 -169363181 + CT-rich Low_complexity Low_complexity 3 75 0 309 281 124 0 chr2 81325284 81325405 -169362449 + MIR SINE MIR 102 237 -25 257 239 119 0 chr2 81325781 81325848 -169362006 + L2 LINE L2 3239 3313 0 496 170 10 0 chr2 81326779 81326879 -169360975 - L1MA9 LINE L1 0 6312 6212 337 259 71 0 chr2 81327460 81327545 -169360309 - L2 LINE L2 -24 3289 3199 21 0 0 0 chr2 81327727 81327748 -169360106 + AT_rich Low_complexity Low_complexity 1 21 0 2683 178 31 31 chr2 81328042 81328615 -169359239 + LTR24B LTR ERV1 1 573 -3 1084 183 105 149 chr2 81330154 81330914 -169356940 + LTR8A LTR ERV1 1 727 0 274 303 85 37 chr2 81331078 81331266 -169356588 + HAL1b LINE L1 401 597 -751 1359 237 50 8 chr2 81331445 81331804 -169356050 + MLT1A2 LTR MaLR 1 374 0 354 98 0 0 chr2 81331990 81332041 -169355813 + (TG)n Simple_repeat Simple_repeat 2 52 0 3192 200 14 18 chr2 81332309 81332695 -169355159 - L1MA7 LINE L1 -379 5912 5525 4168 174 31 5 chr2 81332695 81333458 -169354396 - LTR39 LTR ERV1 0 783 1 3192 200 14 18 chr2 81333458 81333813 -169354041 - L1MA7 LINE L1 -766 5525 5170 1508 206 24 22 chr2 81333812 81334181 -169353673 + L1MA7 LINE L1 5922 6291 0 * 256 316 116 26 chr2 81335760 81335950 -169351904 + L2 LINE L2 2146 2352 -962 2645 109 19 0 chr2 81336428 81336795 -169351059 - THE1C LTR MaLR 0 375 2 305 318 159 37 chr2 81338228 81338442 -169349412 + MIR SINE MIR 19 258 -4 30 69 0 0 chr2 81338501 81338559 -169349295 + AT_rich Low_complexity Low_complexity 1 58 0 2047 113 31 6 chr2 81338693 81339083 -169348771 + LTR7 LTR ERV1 1 450 0 22 0 0 0 chr2 81339554 81339576 -169348278 + AT_rich Low_complexity Low_complexity 1 22 0 245 275 122 43 chr2 81340044 81340437 -169347417 - L1M4 LINE L1 -1605 4541 4118 345 308 110 36 chr2 81340621 81341329 -169346525 - L1M4 LINE L1 -2225 3921 3148 526 229 109 0 chr2 81341330 81341505 -169346349 - L1MD3 LINE L1 -15 7980 7787 270 0 0 0 chr2 81341506 81341536 -169346318 + (TG)n Simple_repeat Simple_repeat 1 30 0 2869 240 71 35 chr2 81341550 81341636 -169346218 - L1MD2 LINE L1 -249 6110 6029 2612 83 97 7 chr2 81341636 81342047 -169345807 - LTR7 LTR ERV1 -2 448 1 2869 240 71 35 chr2 81342047 81343163 -169344691 - L1MD2 LINE L1 -330 6029 4872 1432 89 5 0 chr2 81345023 81345214 -169342640 - AluSg/x SINE Alu -17 295 104 734 328 75 16 chr2 81347542 81347929 -169339925 + LTR16A LTR ERVL 35 444 -6 245 377 58 13 chr2 81347967 81348121 -169339733 + LTR16A LTR ERVL 290 450 0 822 206 11 22 chr2 81348376 81348556 -169339298 + LTR28 LTR ERV1 1 178 -842 * 889 219 97 39 chr2 81348532 81348931 -169338923 + LTR27 LTR ERV1 202 567 -69 654 232 0 35 chr2 81348905 81349047 -169338807 + LTR28 LTR ERV1 879 1015 -5 * 1846 142 0 116 chr2 81349256 81349636 -169338218 + MER1B DNA MER1_type 1 336 -1 589 211 0 59 chr2 81351043 81351195 -169336659 - FLAM_C SINE Alu 0 143 1 304 347 88 21 chr2 81351448 81351687 -169336167 + MIR SINE MIR 3 257 -5 21 82 0 0 chr2 81352011 81352060 -169335794 + AT_rich Low_complexity Low_complexity 1 49 0 311 284 135 28 chr2 81353268 81353483 -169334371 + L1M4 LINE L1 2690 2927 -3219 23 0 0 0 chr2 81354577 81354600 -169333254 + AT_rich Low_complexity Low_complexity 1 23 0 257 246 0 0 chr2 81354607 81354668 -169333186 + L1MDb LINE L1 1195 1255 -5154 1081 276 35 13 chr2 81354668 81354983 -169332871 + MLT1A2 LTR MaLR 53 374 0 247 273 127 70 chr2 81355142 81355472 -169332382 + L1MDb LINE L1 1428 1776 -4630 703 284 68 12 chr2 81355479 81355729 -169332125 - ERVL LTR ERVL -4622 1142 879 23 33 0 0 chr2 81355819 81355849 -169332005 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 81355984 81356007 -169331847 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 81357646 81357681 -169330173 + AT_rich Low_complexity Low_complexity 1 35 0 1298 178 8 27 chr2 81358285 81358544 -169329310 + AluSx SINE Alu 1 254 -58 273 296 25 0 chr2 81359758 81359839 -169328015 - L2 LINE L2 -2 3311 3229 1045 223 0 0 chr2 81359918 81360124 -169327730 + MSTB LTR MaLR 1 206 -220 292 91 0 0 chr2 81360394 81360438 -169327416 - AluSc SINE Alu -2 297 254 1613 97 0 0 chr2 81360438 81360645 -169327209 - AluSg SINE Alu -103 207 1 684 320 79 3 chr2 81360788 81361166 -169326688 - L1ME3A LINE L1 -14 6156 5750 486 197 7 63 chr2 81363090 81363232 -169324622 - L1MC3 LINE L1 -1562 6223 6090 6614 197 69 37 chr2 81363240 81363408 -169324446 - L1MC3 LINE L1 -743 5403 5242 2120 128 3 0 chr2 81363408 81363713 -169324141 - AluSp SINE Alu -7 306 1 6614 197 69 37 chr2 81363713 81365626 -169322228 - L1MC3 LINE L1 -904 5242 4824 2019 255 58 45 chr2 81365648 81366271 -169321583 - MER21B LTR ERV1 -86 777 147 654 315 34 6 chr2 81366271 81366592 -169321262 - L1M4 LINE L1 -3415 2731 2402 11863 152 39 26 chr2 81366592 81368637 -169319217 - Tigger1 DNA MER2_type 0 2418 343 1998 137 21 54 chr2 81368637 81369025 -169318829 + THE1C LTR MaLR 1 375 0 11863 152 39 26 chr2 81369025 81369139 -169318715 - Tigger1 DNA MER2_type -2075 343 232 3590 134 26 12 chr2 81369139 81369389 -169318465 - L1PA16 LINE L1 -307 5859 5614 1784 154 10 3 chr2 81369389 81369681 -169318173 - AluJb SINE Alu -14 298 5 3590 134 26 12 chr2 81369681 81370120 -169317734 - L1PA16 LINE L1 -552 5614 5161 * 3823 250 38 5 chr2 81370118 81371183 -169316671 - L1 LINE L1 -1153 4993 3894 295 279 0 0 chr2 81371208 81371294 -169316560 + L1MB5 LINE L1 2627 2712 -3434 1745 181 13 13 chr2 81371296 81371610 -169316244 - MER1B DNA MER1_type -25 314 1 3365 241 38 73 chr2 81371645 81372512 -169315342 + L1MB5 LINE L1 2757 3543 -2603 2425 53 0 0 chr2 81372512 81372850 -169315004 + AluY SINE Alu 1 338 0 3365 241 38 73 chr2 81372850 81373621 -169314233 + L1MB5 LINE L1 3543 4339 -1807 2826 120 2 0 chr2 81373647 81374072 -169313782 - L1PA8 LINE L1 -1602 4544 4119 6059 112 10 2 chr2 81374072 81375654 -169312200 + L1PA8 LINE L1 4552 6171 -1 3410 220 47 34 chr2 81375654 81377437 -169310417 + L1MB5 LINE L1 4371 6166 -8 1496 167 10 33 chr2 81379004 81379304 -169308550 - AluJo SINE Alu -19 293 1 884 295 72 21 chr2 81379555 81379931 -169307923 - MLT1I LTR MaLR -10 399 5 610 253 7 14 chr2 81381463 81381609 -169306245 - MLT1E LTR MaLR -448 145 1 1211 234 28 14 chr2 81381933 81382219 -169305635 + AluJb SINE Alu 1 290 -12 24 77 0 0 chr2 81382313 81382365 -169305489 + AT_rich Low_complexity Low_complexity 1 52 0 1877 99 46 11 chr2 81382550 81382858 -169304996 + AluSq SINE Alu 6 313 0 343 309 144 14 chr2 81382978 81383117 -169304737 + L2 LINE L2 3116 3272 0 23 0 0 0 chr2 81383672 81383695 -169304159 + AT_rich Low_complexity Low_complexity 1 23 0 1704 253 89 2 chr2 81384374 81384832 -169303022 - MLT1D LTR MaLR -2 503 6 1289 243 40 92 chr2 81384837 81385359 -169302495 - MLT1D-int LTR MaLR 0 1371 877 1317 221 68 128 chr2 81385442 81386004 -169301850 - MLT1D-int LTR MaLR -487 884 357 570 219 0 17 chr2 81386000 81386119 -169301735 - MLT1D-int LTR MaLR -1253 118 2 * 1443 229 76 38 chr2 81386120 81386517 -169301337 - MLT1D LTR MaLR 0 505 94 527 372 55 13 chr2 81389910 81390308 -169297546 - L2 LINE L2 -1317 1997 1583 239 384 33 33 chr2 81390362 81390513 -169297341 - L2 LINE L2 -2836 478 328 1842 161 68 21 chr2 81391006 81391391 -169296463 - MER57A LTR ERV1 0 403 1 517 121 213 25 chr2 81391391 81391589 -169296265 - MER57A-int LTR ERV1 0 7537 7274 565 213 16 16 chr2 81391589 81391716 -169296138 - LTR54B LTR ERV1 -369 129 3 8065 119 34 6 chr2 81391716 81392905 -169294949 - MER57A-int LTR ERV1 -394 7143 5922 1464 234 0 0 chr2 81392905 81393179 -169294675 + L1M1 LINE L1 1294 1567 -5998 8599 165 32 7 chr2 81393184 81395256 -169292598 + L1M1 LINE L1 2046 4169 -3396 189 0 0 0 chr2 81395256 81395277 -169292577 + (T)n Simple_repeat Simple_repeat 1 21 0 2001 116 7 3 chr2 81395955 81396258 -169291596 + AluSx SINE Alu 1 304 -8 4722 211 20 27 chr2 81396681 81397908 -169289946 + L1M1 LINE L1 4157 5374 -2191 1901 190 49 26 chr2 81397932 81398474 -169289380 - MLT2A2 LTR ERVL 0 554 1 2971 195 25 24 chr2 81398475 81398835 -169289019 + L1M1 LINE L1 5387 5752 -1813 1982 128 4 0 chr2 81398835 81399144 -169288710 - AluSx SINE Alu 0 310 1 2971 195 25 24 chr2 81399144 81399418 -169288436 + L1M1 LINE L1 5752 6024 -1541 4521 118 53 17 chr2 81399418 81400184 -169287670 + L1MA3 LINE L1 5512 6305 0 1945 133 44 0 chr2 81401180 81401473 -169286381 - AluSp SINE Alu 0 313 8 21 0 0 31 chr2 81401613 81401624 -169286230 + AT_rich Low_complexity Low_complexity 1 11 -20 2155 104 0 3 chr2 81401624 81401923 -169285931 + AluY SINE Alu 1 298 -13 21 0 0 31 chr2 81401923 81401943 -169285911 + AT_rich Low_complexity Low_complexity 11 31 0 600 334 134 29 chr2 81402176 81402825 -169285029 + L2 LINE L2 1987 2703 -611 1617 171 14 7 chr2 81403066 81403352 -169284502 - AluJb SINE Alu -24 288 1 338 300 17 61 chr2 81403584 81403764 -169284090 - MER46C DNA MER2_type -84 254 83 28 0 0 0 chr2 81403929 81403957 -169283897 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 81404979 81405015 -169282839 + AT_rich Low_complexity Low_complexity 1 36 0 933 68 53 0 chr2 81405316 81405448 -169282406 + AluSg/x SINE Alu 172 310 -2 23 0 0 0 chr2 81406103 81406126 -169281728 + AT_rich Low_complexity Low_complexity 1 23 0 1461 175 96 51 chr2 81406586 81407015 -169280839 + LTR7 LTR ERV1 1 448 -2 19627 95 27 12 chr2 81407017 81409969 -169277885 + HERVH LTR ERV1 1 2995 -4718 960 127 7 0 chr2 81409948 81410098 -169277756 + HERVH LTR ERV1 3140 3290 -4423 * 3358 107 4 6 chr2 81410088 81410591 -169277263 + HERVH LTR ERV1 3492 3993 -3720 4268 139 3 3 chr2 81410593 81411255 -169276599 + HERVH LTR ERV1 4488 5149 -2564 1345 124 18 27 chr2 81411252 81411477 -169276377 + HERVH LTR ERV1 5597 5819 -1894 * 2751 66 13 13 chr2 81411475 81411867 -169275987 + HERVH LTR ERV1 7322 7713 0 1397 156 109 67 chr2 81411867 81412297 -169275557 + LTR7 LTR ERV1 1 448 -2 24 53 0 0 chr2 81412435 81412473 -169275381 + AT_rich Low_complexity Low_complexity 1 38 0 29 70 0 0 chr2 81412606 81412663 -169275191 + AT_rich Low_complexity Low_complexity 1 57 0 24 0 0 0 chr2 81412685 81412709 -169275145 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 81412761 81412782 -169275072 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 81412913 81412952 -169274902 + AT_rich Low_complexity Low_complexity 1 39 0 1479 155 10 64 chr2 81413121 81413263 -169274591 - MER51A LTR ERV1 0 634 486 1653 144 16 4 chr2 81413263 81413519 -169274335 + AluSx SINE Alu 35 293 -19 1479 155 10 64 chr2 81413519 81413875 -169273979 - MER51A LTR ERV1 -148 486 2 3021 161 69 12 chr2 81414067 81414631 -169273223 + MER4B LTR ERV1 15 610 0 2568 163 109 9 chr2 81414814 81415355 -169272499 + LTR49 LTR ERV1 1 595 0 4261 189 33 23 chr2 81415522 81415885 -169271969 + L1 LINE L1 3624 3982 -2164 3670 199 43 25 chr2 81415885 81416768 -169271086 + MER4D LTR ERV1 3 901 -2 4261 189 33 23 chr2 81416768 81417386 -169270468 + L1 LINE L1 3982 4614 -1532 11620 243 124 18 chr2 81417388 81419622 -169268232 + L1MA4 LINE L1 1 1998 -5740 1693 188 0 22 chr2 81419622 81419941 -169267913 - AluJb SINE Alu 0 312 1 11620 243 124 18 chr2 81419941 81420120 -169267734 + L1MA4 LINE L1 1998 2157 -5581 2000 136 33 7 chr2 81420120 81420422 -169267432 + AluSx SINE Alu 1 310 -2 11620 243 124 18 chr2 81420422 81423440 -169264414 + L1MA4 LINE L1 2157 6279 -1459 5276 147 3 24 chr2 81423440 81423740 -169264114 + L1PA15 LINE L1 4274 4579 -1586 1664 194 0 3 chr2 81423740 81424024 -169263830 - AluJo SINE Alu -29 283 1 5276 147 3 24 chr2 81424024 81425665 -169262189 + L1PA15 LINE L1 4579 6158 -7 11620 243 124 18 chr2 81425665 81426811 -169261043 + L1MA4 LINE L1 6279 7303 -435 348 171 0 0 chr2 81426811 81426881 -169260973 + L1MA4 LINE L1 7663 7732 -6 28 0 0 0 chr2 81427008 81427036 -169260818 + AT_rich Low_complexity Low_complexity 1 28 0 2233 111 3 0 chr2 81427194 81427500 -169260354 - AluSp SINE Alu -6 307 1 5270 185 45 11 chr2 81428565 81429859 -169257995 + L1MC1 LINE L1 4978 6320 -13 1869 198 122 3 chr2 81429859 81430243 -169257611 + L1M1 LINE L1 815 1244 -6321 563 97 0 153 chr2 81430243 81430367 -169257487 + MER51B LTR ERV1 1 105 -272 * 1216 92 6 0 chr2 81430337 81430501 -169257353 + MER51A LTR ERV1 389 553 -81 202 0 91 0 chr2 81430503 81430536 -169257318 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1714 47 0 0 chr2 81430926 81431141 -169256713 - L1PA5 LINE L1 0 6154 5940 244 80 0 40 chr2 81431501 81431551 -169256303 + (TA)n Simple_repeat Simple_repeat 1 48 0 23 0 0 0 chr2 81431568 81431591 -169256263 + AT_rich Low_complexity Low_complexity 1 23 0 1796 87 19 4 chr2 81431591 81431856 -169255998 - L1MA1 LINE L1 0 6302 6034 316 300 115 66 chr2 81432030 81432377 -169255477 - L1ME LINE L1 -521 5643 5280 32 57 0 0 chr2 81432516 81432569 -169255285 + AT_rich Low_complexity Low_complexity 1 53 0 942 129 36 72 chr2 81432571 81432764 -169255090 - L1PA13 LINE L1 -8 6155 5970 22 70 0 0 chr2 81432945 81432988 -169254866 + AT_rich Low_complexity Low_complexity 1 43 0 384 349 104 2 chr2 81433124 81433519 -169254335 - L1ME LINE L1 -1444 4702 4268 607 286 90 43 chr2 81433541 81433944 -169253910 - L1ME LINE L1 -1955 4191 3763 192 77 0 0 chr2 81433944 81433970 -169253884 + (TA)n Simple_repeat Simple_repeat 1 26 0 607 286 90 43 chr2 81433970 81434077 -169253777 - L1ME LINE L1 -2383 3763 3662 233 290 169 0 chr2 81434765 81434889 -169252965 + MLT1J2 LTR MaLR 21 165 -285 21 71 0 0 chr2 81435396 81435438 -169252416 + AT_rich Low_complexity Low_complexity 1 42 0 1831 125 15 0 chr2 81435790 81436054 -169251800 - AluSq SINE Alu -5 308 41 253 267 0 20 chr2 81437128 81437229 -169250625 + (TATATG)n Simple_repeat Simple_repeat 3 101 0 315 122 0 0 chr2 81438544 81438593 -169249261 + (TA)n Simple_repeat Simple_repeat 1 49 0 693 185 0 8 chr2 81438906 81439008 -169248846 + FLAM_C SINE Alu 1 103 -209 583 76 13 0 chr2 81439008 81439087 -169248767 + MADE1 DNA Mariner 1 80 0 693 185 0 8 chr2 81439087 81439114 -169248740 + FLAM_C SINE Alu 103 129 -183 238 256 26 13 chr2 81439299 81439377 -169248477 + L1M4 LINE L1 4531 4609 -1537 25 65 0 0 chr2 81439604 81439650 -169248204 + AT_rich Low_complexity Low_complexity 1 46 0 193 351 114 9 chr2 81439992 81440106 -169247748 + MIR3 SINE MIR 13 138 -70 22 35 0 0 chr2 81440231 81440260 -169247594 + AT_rich Low_complexity Low_complexity 1 29 0 201 267 27 27 chr2 81440391 81440466 -169247388 - MIR SINE MIR -138 124 50 1940 239 103 24 chr2 81440499 81441181 -169246673 - L1ME2 LINE L1 -2 6162 5427 31 44 0 0 chr2 81442882 81442927 -169244927 + AT_rich Low_complexity Low_complexity 1 45 0 1745 181 0 16 chr2 81443305 81443609 -169244245 + AluSx SINE Alu 3 301 -11 2013 128 6 10 chr2 81444481 81444794 -169243060 + AluSx SINE Alu 1 312 0 1474 213 10 10 chr2 81444996 81445292 -169242562 - AluJb SINE Alu -16 296 1 770 296 69 71 chr2 81445780 81446260 -169241594 + HAL1 LINE L1 36 514 -1993 3725 237 60 107 chr2 81446554 81448722 -169239132 - L1M2 LINE L1 -4197 2910 866 230 91 0 0 chr2 81448728 81448761 -169239093 - L1M2 LINE L1 -6996 34 2 414 268 91 101 chr2 81448794 81449500 -169238354 + HAL1 LINE L1 1043 1741 -766 241 162 0 0 chr2 81449523 81449560 -169238294 - MER44D DNA MER2_type -48 657 621 27 73 0 0 chr2 81449849 81449904 -169237950 + AT_rich Low_complexity Low_complexity 1 55 0 190 78 33 89 chr2 81449981 81450071 -169237783 + (TTATA)n Simple_repeat Simple_repeat 5 89 0 384 202 60 0 chr2 81450114 81450282 -169237572 + (TA)n Simple_repeat Simple_repeat 1 178 0 58 28 0 0 chr2 81450341 81450413 -169237441 + AT_rich Low_complexity Low_complexity 1 72 0 1994 153 25 0 chr2 81450560 81450881 -169236973 + MER44D DNA MER2_type 221 604 -1 352 300 159 22 chr2 81452429 81452656 -169235198 + MIR SINE MIR 4 261 -1 297 371 10 0 chr2 81453752 81453849 -169234005 - MIR SINE MIR -153 109 12 315 336 121 0 chr2 81454282 81454431 -169233423 + HAL1 LINE L1 152 318 -2189 288 0 0 0 chr2 81454775 81454807 -169233047 + (CA)n Simple_repeat Simple_repeat 2 33 0 183 80 0 0 chr2 81455078 81455103 -169232751 + (TTTTC)n Simple_repeat Simple_repeat 4 28 0 182 390 13 0 chr2 81456496 81456573 -169231281 - L2 LINE L2 -323 2949 2872 253 318 26 21 chr2 81456719 81456911 -169230943 - L1M4 LINE L1 -2143 4003 3811 393 349 73 25 chr2 81456982 81457337 -169230517 + MLT1J LTR MaLR 2 373 -138 347 319 111 22 chr2 81458100 81458461 -169229393 - L1ME LINE L1 -455 5707 5315 1560 168 88 23 chr2 81458797 81459148 -169228706 - THE1C LTR MaLR -1 374 1 569 251 6 48 chr2 81459203 81459370 -169228484 + LTR16A LTR ERVL 186 345 -105 1312 311 65 58 chr2 81459415 81460199 -169227655 + HERV16 LTR ERVL 1674 2484 -2621 4493 78 2 0 chr2 81460213 81460804 -169227050 + L1PA6 LINE L1 5561 6152 -2 225 361 21 10 chr2 81460824 81460921 -169226933 - MIR SINE MIR -155 107 10 343 88 99 22 chr2 81461461 81461552 -169226302 + CT-rich Low_complexity Low_complexity 3 100 0 680 107 39 34 chr2 81461564 81461742 -169226112 + CT-rich Low_complexity Low_complexity 2 180 0 3495 100 31 6 chr2 81461847 81462366 -169225488 - L1PA12 LINE L1 -59 6109 5578 3324 184 20 8 chr2 81462365 81463018 -169224836 + L1P LINE L1 4517 5177 -969 * 224 305 143 26 chr2 81463220 81463374 -169224480 + L2 LINE L2 3100 3271 -1 927 234 4 48 chr2 81464980 81465207 -169222647 + MER58A DNA MER1_type 7 223 -1 23 33 0 0 chr2 81465428 81465458 -169222396 + AT_rich Low_complexity Low_complexity 1 30 0 24 53 0 0 chr2 81465613 81465651 -169222203 + AT_rich Low_complexity Low_complexity 1 38 0 2250 130 28 3 chr2 81465948 81466301 -169221553 + THE1B LTR MaLR 1 362 -2 3427 129 38 0 chr2 81466386 81466937 -169220917 - L1PA13 LINE L1 -3 6160 5589 1580 128 4 4 chr2 81466973 81467208 -169220646 + AluSq SINE Alu 1 235 -78 13066 151 23 3 chr2 81467416 81469573 -169218281 - Tigger1 DNA MER2_type -205 2213 14 1341 207 39 81 chr2 81469571 81469952 -169217902 - MLT1B LTR MaLR -25 365 1 * 282 29 0 0 chr2 81470434 81470469 -169217385 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 22 70 0 0 chr2 81471069 81471112 -169216742 + AT_rich Low_complexity Low_complexity 1 43 0 309 180 0 0 chr2 81472565 81472615 -169215239 - L1M1 LINE L1 -760 6602 6553 269 336 24 8 chr2 81472904 81473029 -169214825 - MIR SINE MIR -104 158 32 40 0 0 0 chr2 81474211 81474251 -169213603 + AT_rich Low_complexity Low_complexity 1 40 0 4176 186 10 4 chr2 81475717 81476552 -169211302 - L1M1 LINE L1 -1151 6057 5218 306 222 96 159 chr2 81476727 81476997 -169210857 - L1M1 LINE L1 -6069 1140 888 1731 290 55 28 chr2 81477105 81477744 -169210110 - L1M1 LINE L1 -6314 895 1 207 210 0 80 chr2 81477796 81477896 -169209958 + A-rich Low_complexity Low_complexity 2 93 0 21 0 0 0 chr2 81477980 81478001 -169209853 + AT_rich Low_complexity Low_complexity 1 21 0 1309 259 112 49 chr2 81478124 81478388 -169209466 + L1ME2 LINE L1 4052 4298 -1848 1242 175 12 108 chr2 81478388 81478720 -169209134 + AluJo SINE Alu 1 300 -2 1309 259 112 49 chr2 81478720 81479298 -169208556 + L1ME2 LINE L1 4298 4947 -1199 272 300 0 0 chr2 81479413 81479503 -169208351 - L1MC4 LINE L1 -1339 6703 6614 * 310 269 0 0 chr2 81479495 81479588 -169208266 + L1MC4 LINE L1 6614 6706 -1336 283 264 23 0 chr2 81479519 81479606 -169208248 - L1MC4 LINE L1 -1339 6703 6615 * 201 182 0 0 chr2 81479607 81479640 -169208214 + (TA)n Simple_repeat Simple_repeat 2 34 0 269 190 127 0 chr2 81479643 81479722 -169208132 - L1MC4 LINE L1 -1339 6703 6615 247 294 0 22 chr2 81479747 81479839 -169208015 + L1MC4 LINE L1 6614 6703 -1339 * 251 188 0 0 chr2 81479797 81479845 -169208009 - L1MC4 LINE L1 -1339 6703 6656 1383 282 106 34 chr2 81479874 81480637 -169207217 + L1ME2 LINE L1 5015 5885 -279 1617 172 3 39 chr2 81480637 81480945 -169206909 + AluJo SINE Alu 10 306 -6 1383 282 106 34 chr2 81480945 81481227 -169206627 + L1ME2 LINE L1 5885 6145 -19 2328 256 71 34 chr2 81481430 81482073 -169205781 + L1MC1 LINE L1 2770 3464 -2682 1762 164 52 30 chr2 81482073 81482440 -169205414 + THE1C LTR MaLR 1 375 0 2328 256 71 34 chr2 81482440 81482779 -169205075 + L1MC1 LINE L1 3464 3789 -2357 821 237 40 32 chr2 81482779 81483057 -169204797 - LTR4 LTR ERV1 0 596 317 716 248 52 88 chr2 81483143 81483486 -169204368 - LTR4 LTR ERV1 -239 357 27 4522 230 19 68 chr2 81483529 81485403 -169202451 + L1MC1 LINE L1 3786 5558 -744 941 198 20 20 chr2 81485422 81485624 -169202230 - MLT1A2 LTR MaLR -172 202 1 1997 164 36 3 chr2 81485625 81485990 -169201864 + L1MC1 LINE L1 5563 5939 -394 1813 105 0 92 chr2 81486535 81486849 -169201005 + AluSx SINE Alu 13 297 -15 203 0 37 0 chr2 81488011 81488038 -169199816 + (CA)n Simple_repeat Simple_repeat 2 29 0 508 301 68 11 chr2 81488336 81488512 -169199342 - MIR SINE MIR -48 214 29 230 268 80 0 chr2 81488566 81488678 -169199176 - L1ME4a LINE L1 -5 6116 5996 3134 268 55 21 chr2 81488872 81490095 -169197759 + L1MCb LINE L1 64 1330 -4851 479 253 0 0 chr2 81490096 81490187 -169197667 - AluJ/FLAM SINE Alu -221 91 1 397 295 75 35 chr2 81490350 81490550 -169197304 - MIR SINE MIR -47 215 8 543 178 28 0 chr2 81490861 81490968 -169196886 + FLAM_A SINE Alu 21 130 -12 1807 199 74 70 chr2 81491099 81491612 -169196242 - MLT2B2 LTR ERVL 0 515 1 185 277 0 0 chr2 81491864 81491911 -169195943 - L2 LINE L2 0 3313 3267 388 237 21 21 chr2 81491912 81492009 -169195845 - MER58C DNA MER1_type -3 212 116 246 299 140 37 chr2 81492347 81492454 -169195400 + L2 LINE L2 3154 3271 -1 310 405 15 5 chr2 81493587 81493787 -169194067 + L2 LINE L2 2557 2758 -556 2389 65 3 3 chr2 81493982 81494291 -169193563 - AluY SINE Alu -2 309 1 30 69 0 0 chr2 81494845 81494903 -169192951 + AT_rich Low_complexity Low_complexity 1 58 0 21 57 0 0 chr2 81494926 81494961 -169192893 + AT_rich Low_complexity Low_complexity 1 35 0 257 164 33 0 chr2 81496526 81496587 -169191267 + L1MA9 LINE L1 5970 6032 -280 239 327 65 28 chr2 81496773 81496880 -169190974 + L2 LINE L2 3148 3258 -14 258 311 0 19 chr2 81496881 81496987 -169190867 + GA-rich Low_complexity Low_complexity 1 104 0 21 89 0 0 chr2 81498120 81498176 -169189678 + AT_rich Low_complexity Low_complexity 1 56 0 2411 119 17 6 chr2 81498423 81498783 -169189071 + THE1B LTR MaLR 1 364 0 9065 113 7 69 chr2 81498783 81500314 -169187540 + THE1B-int LTR MaLR 1 1436 -144 296 89 0 0 chr2 81500431 81500476 -169187378 + Alu SINE Alu 261 305 -3 636 170 0 9 chr2 81500478 81500590 -169187264 - L1P4 LINE L1 -575 5588 5478 3258 144 14 9 chr2 81500593 81501149 -169186705 - L1PB1 LINE L1 0 6151 5593 6133 152 17 9 chr2 81501149 81503221 -169184633 - L1PA14 LINE L1 -2 7604 5541 257 68 23 0 chr2 81503241 81503285 -169184569 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 9006 202 90 32 chr2 81503291 81506046 -169181808 - L1PA14 LINE L1 -4124 3460 1 7348 201 27 10 chr2 81506047 81507945 -169179909 - L1P5 LINE L1 -544 5607 3673 288 0 0 0 chr2 81507945 81507977 -169179877 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7348 201 27 10 chr2 81507977 81508119 -169179735 - L1P5 LINE L1 -2478 3673 3535 6741 156 72 19 chr2 81508124 81510228 -169177626 - L1PBb LINE L1 -3312 3550 1289 198 0 0 0 chr2 81510228 81510250 -169177604 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 6741 156 72 19 chr2 81510250 81510560 -169177294 - L1PBb LINE L1 -5573 1289 997 416 177 0 0 chr2 81560560 81560639 -169127215 - L1 LINE L1 -1460 4686 4608 745 136 32 0 chr2 81563320 81563445 -169124409 - L1PBb LINE L1 -6734 129 1 22 35 0 0 chr2 81563454 81563483 -169124371 + AT_rich Low_complexity Low_complexity 1 29 0 2581 261 55 5 chr2 81564039 81564663 -169123191 + L1MA4 LINE L1 13 667 -6898 8306 212 114 8 chr2 81564666 81566591 -169121263 + L1MA4 LINE L1 1354 3511 -4054 792 32 0 0 chr2 81566591 81566686 -169121168 + (GGAA)n Simple_repeat Simple_repeat 4 98 0 8306 212 114 8 chr2 81566686 81566816 -169121038 + L1MA4 LINE L1 3511 3626 -3939 4952 190 26 8 chr2 81566785 81567361 -169120493 + L1MA4 LINE L1 6617 7219 -500 * 300 102 0 0 chr2 81567361 81567410 -169120444 + (TG)n Simple_repeat Simple_repeat 1 49 0 4952 190 26 8 chr2 81567410 81567903 -169119951 + L1MA4 LINE L1 7219 7702 -17 217 345 23 6 chr2 81567988 81568165 -169119689 + (TA)n Simple_repeat Simple_repeat 1 180 0 1273 206 79 15 chr2 81568340 81568698 -169119156 - MER31A LTR ERV1 0 661 101 282 318 52 23 chr2 81569111 81569240 -169118614 - MIR SINE MIR -57 151 13 482 296 79 16 chr2 81570333 81570522 -169117332 - LTR16A1 LTR ERVL 0 457 257 263 200 0 27 chr2 81571889 81571964 -169115890 + (CATA)n Simple_repeat Simple_repeat 3 75 0 25 31 0 0 chr2 81572504 81572536 -169115318 + AT_rich Low_complexity Low_complexity 1 32 0 1364 228 26 29 chr2 81572600 81572942 -169114912 - MER58B DNA MER1_type 0 341 1 306 0 0 0 chr2 81574172 81574206 -169113648 + (TG)n Simple_repeat Simple_repeat 2 35 0 2140 120 0 7 chr2 81575366 81575674 -169112180 + AluSg SINE Alu 1 306 -4 310 308 43 39 chr2 81575997 81576231 -169111623 + L1ME LINE L1 5568 5802 -319 21 36 0 0 chr2 81576305 81576333 -169111521 + AT_rich Low_complexity Low_complexity 1 28 0 229 174 0 0 chr2 81577572 81577618 -169110236 + L1MA7 LINE L1 6246 6291 0 374 380 53 58 chr2 81577631 81577873 -169109981 - L2 LINE L2 -2122 1192 950 2217 56 0 14 chr2 81577873 81578184 -169109670 + AluY SINE Alu 1 307 0 374 380 53 58 chr2 81578184 81578598 -169109256 - L2 LINE L2 -2364 950 538 2325 107 0 0 chr2 81578723 81579033 -169108821 + AluSg SINE Alu 1 310 0 198 0 0 0 chr2 81579518 81579540 -169108314 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2051 173 43 41 chr2 81579553 81580106 -169107748 - MLT2A2 LTR ERVL 0 554 4 699 171 0 0 chr2 81580106 81580223 -169107631 - AluJo SINE Alu -33 279 163 656 184 7 37 chr2 81580243 81580379 -169107475 - AluJo SINE Alu -169 133 2 301 279 0 12 chr2 81582330 81582370 -169105484 + CT-rich Low_complexity Low_complexity 2 41 -45 270 56 0 0 chr2 81582370 81582406 -169105448 + (CA)n Simple_repeat Simple_repeat 2 37 0 301 279 0 12 chr2 81582406 81582451 -169105403 + CT-rich Low_complexity Low_complexity 41 86 0 351 0 0 0 chr2 81582452 81582491 -169105363 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr2 81584811 81584846 -169103008 + AT_rich Low_complexity Low_complexity 1 35 0 3607 186 13 20 chr2 81585551 81586342 -169101512 - L1MC2 LINE L1 -9 6335 5551 201 171 0 24 chr2 81587369 81587410 -169100444 + (TAGA)n Simple_repeat Simple_repeat 2 41 0 192 97 0 0 chr2 81587435 81587466 -169100388 + (TG)n Simple_repeat Simple_repeat 2 32 0 1280 194 22 117 chr2 81588190 81588602 -169099252 + MLT1A2 LTR MaLR 1 373 -1 357 109 0 0 chr2 81588705 81588760 -169099094 + (GA)n Simple_repeat Simple_repeat 1 55 0 769 129 8 0 chr2 81589061 81589185 -169098669 - L1PA16 LINE L1 -5 6161 6037 1797 122 15 0 chr2 81589285 81589555 -169098299 - L1PA16 LINE L1 -329 5837 5564 201 320 41 41 chr2 81589944 81590041 -169097813 + MIR SINE MIR 5 101 -161 251 254 34 0 chr2 81591041 81591100 -169096754 - L2 LINE L2 -4 3309 3249 243 0 0 0 chr2 81591106 81591133 -169096721 + (CA)n Simple_repeat Simple_repeat 2 28 0 200 291 0 0 chr2 81591596 81591651 -169096203 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 219 186 0 0 chr2 81591658 81591701 -169096153 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 470 268 131 10 chr2 81591757 81591955 -169095899 + LTR50 LTR ERVL 1 222 -573 369 0 0 0 chr2 81591979 81592020 -169095834 + (TG)n Simple_repeat Simple_repeat 2 42 0 1497 239 96 16 chr2 81592065 81592450 -169095404 - MER76 LTR ERV -254 434 19 338 228 0 118 chr2 81592459 81592586 -169095268 - L1ME2 LINE L1 -139 6025 5914 211 270 17 52 chr2 81592594 81592709 -169095145 - L2 LINE L2 -1664 1650 1540 21 0 0 0 chr2 81592826 81592847 -169095007 + AT_rich Low_complexity Low_complexity 1 21 0 279 294 0 37 chr2 81593550 81593686 -169094168 + L1ME4a LINE L1 5985 6115 -6 29 70 0 0 chr2 81594049 81594106 -169093748 + AT_rich Low_complexity Low_complexity 1 57 0 186 139 28 0 chr2 81594395 81594431 -169093423 - L2 LINE L2 -168 3145 3109 1208 217 43 35 chr2 81594724 81594820 -169093034 + L1MA7 LINE L1 5938 6032 -259 2027 198 10 0 chr2 81594820 81595219 -169092635 + MER57A LTR ERV1 1 403 0 1208 217 43 35 chr2 81595219 81595468 -169092386 + L1MA7 LINE L1 6032 6286 -5 66 35 0 0 chr2 81595700 81595787 -169092067 + AT_rich Low_complexity Low_complexity 1 87 0 27 62 0 0 chr2 81597291 81597339 -169090515 + AT_rich Low_complexity Low_complexity 1 48 0 237 318 56 70 chr2 81597886 81597982 -169089872 + MIR SINE MIR 52 148 -114 1989 83 0 51 chr2 81597982 81598315 -169089539 + AluY SINE Alu 1 311 0 237 318 56 70 chr2 81598315 81598432 -169089422 + MIR SINE MIR 148 262 0 1935 126 3 35 chr2 81598914 81599224 -169088630 + AluJb SINE Alu 9 308 -4 237 212 24 24 chr2 81599451 81599536 -169088318 + L1MC4 LINE L1 6620 6704 -1338 750 135 74 0 chr2 81599590 81599738 -169088116 + L1M2 LINE L1 5369 5527 -773 1997 134 0 0 chr2 81599740 81600023 -169087831 + AluSg SINE Alu 3 285 -25 476 56 14 0 chr2 81600025 81600097 -169087757 + (CA)n Simple_repeat Simple_repeat 2 74 0 183 80 0 0 chr2 81602838 81602863 -169084991 + (TTTC)n Simple_repeat Simple_repeat 4 28 0 882 166 55 11 chr2 81603458 81603639 -169084215 + L1MC2 LINE L1 6134 6322 -22 295 241 37 25 chr2 81603639 81603801 -169084053 + (TA)n Simple_repeat Simple_repeat 1 164 0 261 0 0 0 chr2 81603834 81603863 -169083991 + (TG)n Simple_repeat Simple_repeat 1 29 0 873 233 40 42 chr2 81603863 81604310 -169083544 + L1ME LINE L1 2226 2674 -3708 1099 195 118 26 chr2 81604312 81604660 -169083194 - L1MA9 LINE L1 -1 6311 5932 1428 261 60 33 chr2 81604686 81605467 -169082387 + L1ME LINE L1 2938 3739 -2643 339 25 0 0 chr2 81606253 81606293 -169081561 + (TG)n Simple_repeat Simple_repeat 1 40 0 673 257 31 55 chr2 81606577 81606948 -169080906 - L1M4c LINE L1 -4865 1507 1041 325 233 0 0 chr2 81608051 81608137 -169079717 + L1PB4 LINE L1 6068 6153 -3 7289 41 1 0 chr2 81608923 81610241 -169077613 + L1PA4 LINE L1 4833 6151 -4 28 0 0 0 chr2 81610241 81610269 -169077585 + AT_rich Low_complexity Low_complexity 1 28 0 275 342 108 17 chr2 81610725 81610845 -169077009 - L2 LINE L2 0 3313 3183 239 316 13 0 chr2 81610878 81610957 -169076897 - MER96 DNA MER1_type? -95 80 1 531 243 139 20 chr2 81610958 81611209 -169076645 + L1ME LINE L1 5286 5506 -896 2161 92 3 7 chr2 81611209 81611540 -169076314 + AluY SINE Alu 3 332 0 531 243 139 20 chr2 81611540 81611690 -169076164 + L1ME LINE L1 5506 5733 -669 30 27 0 0 chr2 81612269 81612306 -169075548 + AT_rich Low_complexity Low_complexity 1 37 0 255 88 0 0 chr2 81613039 81613085 -169074769 - L1PA13 LINE L1 0 6174 6120 728 245 7 7 chr2 81613216 81613367 -169074487 - MER5A DNA MER1_type -3 186 36 1612 158 25 79 chr2 81613554 81613725 -169074129 + MER44D DNA MER2_type 4 183 -2308 1635 112 112 11 chr2 81613725 81613992 -169073862 - AluSg SINE Alu -16 294 1 1612 158 25 79 chr2 81613992 81614175 -169073679 + MER44D DNA MER2_type 183 609 0 1300 219 32 66 chr2 81614359 81614701 -169073153 - MLT2D LTR ERVL -6 408 79 2325 194 30 72 chr2 81614701 81615326 -169072528 + LTR9 LTR ERV1 1 599 -13 414 189 11 11 chr2 81615336 81615431 -169072423 - MLT2D LTR ERVL -302 95 1 384 313 122 51 chr2 81615443 81615795 -169072059 + LTR33 LTR ERVL 127 503 -18 1836 198 8 40 chr2 81616836 81617236 -169070618 - MLT1B LTR MaLR 0 390 4 327 256 43 126 chr2 81617311 81617659 -169070195 + L1MC4a LINE L1 5933 6251 -1557 21 71 0 0 chr2 81617751 81617793 -169070061 + AT_rich Low_complexity Low_complexity 1 42 0 2019 108 11 0 chr2 81617939 81618218 -169069636 - AluSp SINE Alu -11 302 21 7818 139 21 40 chr2 81618651 81620115 -169067739 - L1P LINE L1 -4045 2101 666 * 9718 95 37 7 chr2 81620111 81621588 -169066266 + L1PA7 LINE L1 2253 3773 -2373 9765 88 7 1 chr2 81621732 81623894 -169063960 + L1PA7 LINE L1 3982 6153 -1 22 35 0 0 chr2 81624658 81624687 -169063167 + AT_rich Low_complexity Low_complexity 1 29 0 400 211 31 19 chr2 81625226 81625387 -169062467 + (TA)n Simple_repeat Simple_repeat 1 163 0 997 266 6 6 chr2 81625460 81625772 -169062082 + L1MB5 LINE L1 4923 5234 -912 3246 178 80 35 chr2 81625774 81626520 -169061334 + L1MB5 LINE L1 5395 6174 0 1070 262 38 3 chr2 81626734 81627024 -169060830 - L1MC/D LINE L1 -2159 5649 5350 686 115 0 0 chr2 81627328 81627424 -169060430 + AluY SINE Alu 32 127 -184 4391 24 6 0 chr2 81627424 81627971 -169059883 - L1P LINE L1 -2958 3188 2639 10955 25 1 0 chr2 81627971 81630032 -169057822 + L1PA3 LINE L1 4087 6152 -3 251 36 18 54 chr2 81630044 81630100 -169057754 + (TAAAA)n Simple_repeat Simple_repeat 2 55 0 946 99 8 0 chr2 81630102 81630233 -169057621 + AluY SINE Alu 118 249 -62 310 342 57 0 chr2 81630369 81630527 -169057327 - L1MC/D LINE L1 -1095 5051 4885 5055 171 28 24 chr2 81630593 81631391 -169056463 - L1MA4A LINE L1 -5 6298 5505 1666 178 7 20 chr2 81631391 81631695 -169056159 - AluJb SINE Alu -8 304 5 5055 171 28 24 chr2 81631695 81632594 -169055260 - L1MA4A LINE L1 -798 5505 4586 201 67 44 22 chr2 81632685 81632730 -169055124 + (TA)n Simple_repeat Simple_repeat 1 46 0 374 333 34 15 chr2 81632782 81632986 -169054868 - L1MC/D LINE L1 -1921 4225 4018 22 35 0 0 chr2 81634110 81634139 -169053715 + AT_rich Low_complexity Low_complexity 1 29 0 661 327 141 24 chr2 81637055 81637480 -169050374 + L2 LINE L2 189 663 -2651 2027 135 54 11 chr2 81637648 81637997 -169049857 - THE1B LTR MaLR 0 364 1 24 67 0 0 chr2 81638191 81638236 -169049618 + AT_rich Low_complexity Low_complexity 1 45 0 296 197 0 26 chr2 81638606 81638682 -169049172 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 4667 152 63 0 chr2 81639413 81640291 -169047563 + L1PA16 LINE L1 5231 6162 -4 312 27 0 0 chr2 81641136 81641173 -169046681 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 81641220 81641241 -169046613 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 81641441 81641463 -169046391 + AT_rich Low_complexity Low_complexity 1 22 0 847 211 0 0 chr2 81641515 81641662 -169046192 - FRAM SINE Alu -19 157 11 255 238 16 48 chr2 81641668 81641731 -169046123 - AluS SINE Alu -245 63 3 239 293 30 23 chr2 81642099 81642232 -169045622 - L1MC/D LINE L1 -1982 5826 5693 422 245 95 43 chr2 81642357 81642610 -169045244 - L1MC/D LINE L1 -2287 5521 5256 23 0 0 0 chr2 81642717 81642740 -169045114 + AT_rich Low_complexity Low_complexity 1 23 0 305 325 38 13 chr2 81642787 81642944 -169044910 - L1MC/D LINE L1 -1081 5065 4905 28 29 0 0 chr2 81643002 81643037 -169044817 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 81643435 81643457 -169044397 + AT_rich Low_complexity Low_complexity 1 22 0 225 311 40 0 chr2 81644591 81644665 -169043189 - MIR SINE MIR -137 125 49 1975 145 0 0 chr2 81646288 81646598 -169041256 + AluSx SINE Alu 3 312 0 425 262 41 90 chr2 81646965 81647209 -169040645 + HAL1 LINE L1 972 1203 -1304 282 350 8 24 chr2 81647270 81647393 -169040461 + MER91B DNA MER1_type 14 134 -56 336 354 9 0 chr2 81647485 81647598 -169040256 + L1ME LINE L1 396 509 -5907 2000 309 54 21 chr2 81648383 81649086 -169038768 + L1M3b LINE L1 6 731 -5550 874 307 85 60 chr2 81649147 81649759 -169038095 + L1M3b LINE L1 671 1297 -4984 450 115 32 26 chr2 81649831 81649987 -169037867 + (TA)n Simple_repeat Simple_repeat 1 157 0 324 192 0 41 chr2 81649989 81650062 -169037792 + L1ME LINE L1 1995 2064 -4362 229 133 22 0 chr2 81650064 81650109 -169037745 + (TA)n Simple_repeat Simple_repeat 1 46 0 317 198 11 77 chr2 81650112 81650203 -169037651 + L1ME LINE L1 1996 2080 -4346 261 157 14 14 chr2 81650209 81650279 -169037575 + (TA)n Simple_repeat Simple_repeat 1 70 0 25 65 0 0 chr2 81650282 81650328 -169037526 + AT_rich Low_complexity Low_complexity 1 46 0 1852 265 49 15 chr2 81650590 81651533 -169036321 + L1M3 LINE L1 4493 5471 -709 3060 233 95 63 chr2 81651533 81652624 -169035230 + LTR28 LTR ERV1 1 636 0 807 222 67 40 chr2 81652644 81652869 -169034985 + L1M3 LINE L1 5472 5702 -478 * 2963 204 36 16 chr2 81652860 81653533 -169034321 + L1MB4 LINE L1 5495 6180 0 2029 161 43 0 chr2 81653842 81654147 -169033707 - LTR18A LTR ERVL -39 318 1 21761 180 11 6 chr2 81654148 81660160 -169027694 - HERVL18 LTR ERVL 0 6047 10 2009 146 82 0 chr2 81660175 81660505 -169027349 - LTR18A LTR ERVL 0 357 1 24 0 0 0 chr2 81660767 81660791 -169027063 + AT_rich Low_complexity Low_complexity 1 24 0 200 326 142 7 chr2 81663068 81663209 -169024645 - L2 LINE L2 -4 3309 3150 1526 314 97 65 chr2 81663293 81664519 -169023335 - L2 LINE L2 0 3313 2034 2218 90 0 37 chr2 81664519 81664842 -169023012 - AluY SINE Alu 0 311 1 1526 314 97 65 chr2 81664842 81664933 -169022921 - L2 LINE L2 -1279 2034 1947 25 31 0 0 chr2 81665163 81665195 -169022659 + AT_rich Low_complexity Low_complexity 1 32 0 1087 165 24 10 chr2 81666961 81667167 -169020687 - L1PA15 LINE L1 0 6165 5957 1653 63 90 0 chr2 81667167 81667390 -169020464 + AluY SINE Alu 68 310 -1 246 274 0 0 chr2 81667930 81667981 -169019873 + polypurine Low_complexity Low_complexity 5 55 0 328 217 0 37 chr2 81668084 81668245 -169019609 + (TA)n Simple_repeat Simple_repeat 2 156 0 636 191 24 24 chr2 81668901 81669069 -169018785 - MER53 DNA DNA -2 187 20 328 305 50 0 chr2 81669453 81669594 -169018260 - L1MC/D LINE L1 -2246 5562 5415 264 133 0 0 chr2 81669622 81669667 -169018187 - L1PA15 LINE L1 -520 5780 5736 4913 240 28 8 chr2 81669670 81671081 -169016773 - L1MEc LINE L1 -2043 5063 3626 1240 281 13 6 chr2 81671087 81671404 -169016450 - L1 LINE L1 -6706 324 6 634 301 40 28 chr2 81671511 81672012 -169015842 - L1MEc LINE L1 -4579 2708 2202 192 40 0 0 chr2 81672035 81672060 -169015794 + (TC)n Simple_repeat Simple_repeat 2 26 0 364 286 101 32 chr2 81672118 81672335 -169015519 - L1MEc LINE L1 -5018 2091 1860 310 285 85 16 chr2 81672338 81672584 -169015270 - L1MEc LINE L1 -4905 1683 1421 1228 245 103 3 chr2 81672679 81673211 -169014643 + MER82 DNA MER2_type 11 652 -1 377 351 126 15 chr2 81673389 81673660 -169014194 - L1MEc LINE L1 -5320 1268 968 260 172 0 35 chr2 81673771 81673829 -169014025 - MER58 DNA MER1_type -120 95 40 911 300 46 33 chr2 81674219 81674673 -169013181 - L1MEc LINE L1 -5947 641 182 203 193 0 18 chr2 81674683 81674740 -169013114 + T-rich Low_complexity Low_complexity 4 59 0 209 260 48 10 chr2 81675181 81675285 -169012569 + T-rich Low_complexity Low_complexity 3 110 0 247 257 68 0 chr2 81675625 81675699 -169012155 + MLT1H LTR MaLR 145 223 -326 25 65 0 0 chr2 81677689 81677735 -169010119 + AT_rich Low_complexity Low_complexity 1 46 0 28 29 0 0 chr2 81678094 81678129 -169009725 + AT_rich Low_complexity Low_complexity 1 35 0 1777 190 94 10 chr2 81678511 81678906 -169008948 + MSTA LTR MaLR 1 428 0 27 29 0 0 chr2 81678940 81678974 -169008880 + AT_rich Low_complexity Low_complexity 1 34 0 24 32 0 0 chr2 81679079 81679110 -169008744 + AT_rich Low_complexity Low_complexity 1 31 0 232 274 68 26 chr2 81680485 81680675 -169007179 + L1MC/D LINE L1 5687 5884 -1924 1259 148 89 0 chr2 81680696 81680933 -169006921 - Tigger2 DNA MER2_type -10 2708 2451 3424 168 52 33 chr2 81680995 81681728 -169006126 - Tigger2 DNA MER2_type -1971 747 1 256 303 128 0 chr2 81682062 81682171 -169005683 - MLT1I LTR MaLR -247 162 40 21 0 0 0 chr2 81682205 81682226 -169005628 + AT_rich Low_complexity Low_complexity 1 21 0 241 333 24 12 chr2 81682561 81682645 -169005209 - MER5B DNA MER1_type -4 174 90 2568 159 59 137 chr2 81682663 81683443 -169004411 - L1MB1 LINE L1 -228 5940 5222 281 280 100 82 chr2 81683454 81683733 -169004121 - L1M3d LINE L1 -5605 286 3 393 300 151 43 chr2 81683796 81684194 -169003660 + LTR16A LTR ERVL 18 457 0 1689 182 18 32 chr2 81684946 81685326 -169002528 + THE1C LTR MaLR 1 375 0 8366 138 89 16 chr2 81685328 81686798 -169001056 + THE1C-int LTR MaLR 3 1580 0 1376 175 131 18 chr2 81686798 81687135 -169000719 + THE1C LTR MaLR 1 375 0 246 136 0 0 chr2 81687865 81687909 -168999945 + (CA)n Simple_repeat Simple_repeat 1 44 0 347 293 103 43 chr2 81688162 81688462 -168999392 + L1ME3A LINE L1 5819 6136 -34 31 0 0 0 chr2 81689384 81689415 -168998439 + AT_rich Low_complexity Low_complexity 1 31 0 318 278 44 0 chr2 81689519 81689609 -168998245 - L1MEd LINE L1 -5936 183 90 621 219 73 0 chr2 81690157 81690294 -168997560 + MER20 DNA MER1_type 1 147 -72 201 341 61 30 chr2 81690456 81690620 -168997234 - MIR SINE MIR -27 235 67 22 35 0 0 chr2 81691498 81691527 -168996327 + AT_rich Low_complexity Low_complexity 1 29 0 378 207 27 36 chr2 81692070 81692181 -168995673 + Charlie4 DNA MER1_type 1850 1959 -2 328 286 43 29 chr2 81692194 81692334 -168995520 - L1ME LINE L1 -525 5645 5504 1830 197 19 19 chr2 81692336 81692701 -168995153 - MLT1A1 LTR MaLR 0 365 1 27 29 0 0 chr2 81693033 81693067 -168994787 + AT_rich Low_complexity Low_complexity 1 34 0 30 45 0 0 chr2 81693609 81693653 -168994201 + AT_rich Low_complexity Low_complexity 1 44 0 5180 206 41 89 chr2 81694525 81696089 -168991765 + MER52A LTR ERV1 336 1712 -43 1910 205 41 32 chr2 81696320 81697326 -168990528 + L1MA6 LINE L1 2533 3529 -4190 1956 100 0 0 chr2 81697326 81697576 -168990278 + AluSc SINE Alu 47 296 -13 1910 205 41 32 chr2 81697576 81701399 -168986455 + L1MA6 LINE L1 3529 7560 -159 * 2477 211 5 25 chr2 81701393 81702005 -168985849 + L1 LINE L1 3961 4560 -1586 1183 261 60 54 chr2 81702345 81702808 -168985046 + LTR40a LTR ERVL 3 468 -51 26 50 0 0 chr2 81703502 81703542 -168984312 + AT_rich Low_complexity Low_complexity 1 40 0 208 388 8 0 chr2 81703646 81703767 -168984087 - MIR SINE MIR -49 213 92 25 51 0 0 chr2 81704478 81704517 -168983337 + AT_rich Low_complexity Low_complexity 1 39 0 303 93 0 0 chr2 81705482 81705525 -168982329 + (A)n Simple_repeat Simple_repeat 1 43 0 239 323 75 43 chr2 81707001 81707162 -168980692 + L1PB4 LINE L1 395 560 -5644 315 282 0 0 chr2 81707220 81707298 -168980556 + L1PB4 LINE L1 716 793 -5410 11178 237 44 7 chr2 81707381 81712070 -168975784 + L1PB4 LINE L1 799 5669 -544 493 91 0 69 chr2 81712085 81712194 -168975660 - L1PA8 LINE L1 0 6142 6036 2337 217 23 4 chr2 81712194 81712720 -168975134 + L1PB4 LINE L1 5664 6199 -14 724 144 42 66 chr2 81712728 81712867 -168974987 + L1 LINE L1 3440 3576 -2570 1868 225 29 31 chr2 81712867 81713321 -168974533 - MSTB2 LTR MaLR -4 453 1 724 144 42 66 chr2 81713321 81713348 -168974506 + L1 LINE L1 3576 3602 -2544 2135 223 36 7 chr2 81713379 81713930 -168973924 + L1 LINE L1 3887 4453 -1693 17040 175 25 10 chr2 81713939 81716317 -168971537 + L1MA3 LINE L1 688 3029 -4695 228 111 0 0 chr2 81716317 81716353 -168971501 + (TTAGGG)n Simple_repeat Simple_repeat 3 38 0 17040 175 25 10 chr2 81716353 81720902 -168966952 + L1MA3 LINE L1 3029 7724 0 1266 267 38 38 chr2 81720888 81721515 -168966339 + L1M4 LINE L1 951 1580 -4962 * 2707 143 70 15 chr2 81721515 81721990 -168965864 + MER84 LTR ERV1 5 505 -2 1266 267 38 38 chr2 81721990 81722017 -168965837 + L1M4 LINE L1 1579 1605 -4937 1807 247 29 10 chr2 81722020 81722530 -168965324 + L1M4 LINE L1 4777 5296 -1348 377 300 130 60 chr2 81723722 81724177 -168963677 + MLT1G LTR MaLR 73 590 0 231 338 12 12 chr2 81724195 81724275 -168963579 + MLT1K LTR MaLR 171 250 -338 205 161 0 0 chr2 81725681 81725712 -168962142 + (TG)n Simple_repeat Simple_repeat 2 32 0 2048 120 7 0 chr2 81726093 81726384 -168961470 + AluSx SINE Alu 1 293 -19 2314 266 70 5 chr2 81726673 81727313 -168960541 - MER76 LTR ERV 0 688 7 253 364 0 0 chr2 81728007 81728106 -168959748 - MLT1J LTR MaLR -303 208 110 2335 125 25 14 chr2 81729310 81729670 -168958184 - THE1B LTR MaLR 0 364 1 2890 87 5 0 chr2 81729670 81730061 -168957793 - THE1B-int LTR MaLR 0 1580 1188 2340 195 89 0 chr2 81730058 81730551 -168957303 - L1 LINE L1 -1158 4988 4452 * 3438 169 49 21 chr2 81730551 81730751 -168957103 + L1MA4 LINE L1 5555 5748 -552 213 39 0 0 chr2 81730751 81730777 -168957077 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 3438 169 49 21 chr2 81730777 81731296 -168956558 + L1MA4 LINE L1 5748 6294 -6 1416 161 79 32 chr2 81731715 81732056 -168955798 + MER46B DNA MER2_type 5 236 0 300 150 0 75 chr2 81736000 81736037 -168951817 + L1MA8 LINE L1 6213 6242 -49 1206 211 30 112 chr2 81736037 81736535 -168951319 - MSTB2 LTR MaLR 0 457 1 300 150 0 75 chr2 81736535 81736577 -168951277 + L1MA8 LINE L1 6242 6286 -5 831 195 6 0 chr2 81736590 81736764 -168951090 + L1MA7 LINE L1 5937 6111 -180 1475 178 108 6 chr2 81736764 81737150 -168950704 + Tigger2 DNA MER2_type 1 2718 0 648 179 50 34 chr2 81737150 81737192 -168950662 + L1MA7 LINE L1 6110 6150 -141 192 40 0 0 chr2 81737192 81737217 -168950637 + (CA)n Simple_repeat Simple_repeat 1 25 0 648 179 50 34 chr2 81737217 81737353 -168950501 + L1MA7 LINE L1 6150 6291 0 192 40 0 0 chr2 81737674 81737699 -168950155 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 402 39 0 0 chr2 81737698 81737750 -168950104 + (GA)n Simple_repeat Simple_repeat 2 53 0 472 323 38 17 chr2 81737759 81738047 -168949807 + HAL1b LINE L1 279 572 -776 928 221 50 11 chr2 81738530 81739087 -168948767 - L1M4 LINE L1 -1202 4944 4306 33 56 0 0 chr2 81739257 81739311 -168948543 + AT_rich Low_complexity Low_complexity 1 54 0 354 263 57 11 chr2 81739371 81739515 -168948339 - L1MCa LINE L1 -4509 1917 1710 25 0 0 0 chr2 81739597 81739622 -168948232 + AT_rich Low_complexity Low_complexity 1 25 0 562 213 9 0 chr2 81739625 81739733 -168948121 - FLAM_A SINE Alu -22 120 12 13006 168 51 20 chr2 81739920 81740123 -168947731 + Tigger4(Zombi) DNA MER2_type 2 197 -2534 2365 125 8 13 chr2 81740123 81740500 -168947354 - THE1C LTR MaLR 0 375 1 13006 168 51 20 chr2 81740500 81742400 -168945454 + Tigger4(Zombi) DNA MER2_type 197 2198 -533 1727 134 0 11 chr2 81742400 81742661 -168945193 - AluSx SINE Alu -20 292 35 13006 168 51 20 chr2 81742661 81743068 -168944786 + Tigger4(Zombi) DNA MER2_type 2198 2591 -140 380 312 58 40 chr2 81743920 81744093 -168943761 + MIR SINE MIR 76 251 -11 955 151 12 6 chr2 81746367 81746533 -168941321 - L1PA15 LINE L1 -5 6160 5994 495 234 166 36 chr2 81746865 81747143 -168940711 - L1M4 LINE L1 -1717 4611 4298 1504 223 13 42 chr2 81747304 81747681 -168940173 + MLT1A2 LTR MaLR 1 366 -8 1595 198 53 17 chr2 81747987 81748346 -168939508 + MLT1B LTR MaLR 19 390 0 25 0 0 0 chr2 81748431 81748456 -168939398 + AT_rich Low_complexity Low_complexity 1 25 0 1044 279 35 32 chr2 81748939 81749308 -168938546 - MLT1A2 LTR MaLR -4 370 1 1038 108 0 0 chr2 81749582 81749721 -168938133 - L1PA7 LINE L1 -1976 4170 4032 8068 101 6 0 chr2 81749721 81751646 -168936208 + L1PA7 LINE L1 4197 6139 -15 260 286 11 11 chr2 81751753 81751844 -168936010 + LTR67 LTR ERVL 428 518 -39 6493 230 41 14 chr2 81751997 81755062 -168932792 - L1M4 LINE L1 -2404 3924 781 2526 235 72 38 chr2 81755107 81755772 -168932082 - L1M4 LINE L1 -4625 703 16 24 77 0 0 chr2 81756815 81756867 -168930987 + AT_rich Low_complexity Low_complexity 1 52 0 314 354 16 16 chr2 81756917 81757044 -168930810 - MIR SINE MIR -65 143 17 3189 90 4 13 chr2 81757860 81758314 -168929540 - L1PA11 LINE L1 -1 6173 5724 2093 148 39 3 chr2 81758314 81758891 -168928963 + L1P4 LINE L1 4966 5560 -608 278 320 117 8 chr2 81759647 81759775 -168928079 - L2 LINE L2 -13 3300 3159 1089 237 34 80 chr2 81760023 81760211 -168927643 - MLT1D LTR MaLR -69 436 270 1331 164 43 11 chr2 81760211 81760447 -168927407 - L1MA4A LINE L1 -6 6297 6049 537 100 0 0 chr2 81760447 81760527 -168927327 - MADE1 DNA Mariner 0 80 1 1331 164 43 11 chr2 81760527 81760571 -168927283 - L1MA4A LINE L1 -254 6049 6008 1089 237 34 80 chr2 81760571 81760732 -168927122 - MLT1D LTR MaLR -235 270 103 201 275 38 25 chr2 81761061 81761141 -168926713 + L2 LINE L2 2575 2655 -659 22 0 0 0 chr2 81761171 81761193 -168926661 + AT_rich Low_complexity Low_complexity 1 22 0 243 154 39 0 chr2 81761209 81761261 -168926593 - L1MB1 LINE L1 0 6168 6115 1785 64 4 8 chr2 81761284 81761520 -168926334 - AluSp SINE Alu -78 235 1 1254 217 14 34 chr2 81761520 81761870 -168925984 - L1MB1 LINE L1 -39 6129 5787 1313 115 39 19 chr2 81761870 81762078 -168925776 + MLT2B1 LTR ERVL 1 212 -308 648 307 0 0 chr2 81762660 81762849 -168925005 + MER5A DNA MER1_type 1 189 0 21 36 0 0 chr2 81762917 81762945 -168924909 + AT_rich Low_complexity Low_complexity 1 28 0 2001 112 14 10 chr2 81762947 81763243 -168924611 - AluSq SINE Alu -16 297 1 379 385 83 25 chr2 81763407 81763908 -168923946 - L2 LINE L2 -256 3057 2531 277 258 0 78 chr2 81764163 81764291 -168923563 - L1MEc LINE L1 -2701 4240 4123 1155 203 12 17 chr2 81764328 81764569 -168923285 - MLT1D LTR MaLR -260 245 6 897 314 65 20 chr2 81764623 81765279 -168922575 - L1MEc LINE L1 -4086 3036 2351 581 264 48 10 chr2 81765286 81765494 -168922360 - L1MEc LINE L1 -5026 1915 1700 423 0 0 0 chr2 81765495 81765542 -168922312 + (TG)n Simple_repeat Simple_repeat 2 48 0 583 308 25 13 chr2 81765544 81765781 -168922073 - L1MEc LINE L1 -5277 1664 1425 1308 193 4 8 chr2 81765885 81766129 -168921725 + AluJb SINE Alu 64 306 -6 679 288 22 69 chr2 81766633 81766953 -168920901 - LTR40a LTR ERVL -211 308 4 375 315 5 60 chr2 81768283 81768467 -168919387 + MER5B DNA MER1_type 2 175 -3 210 343 37 46 chr2 81769258 81769366 -168918488 + L2 LINE L2 2937 3043 -229 21 71 0 0 chr2 81769543 81769585 -168918269 + AT_rich Low_complexity Low_complexity 1 42 0 336 318 75 23 chr2 81770040 81770345 -168917509 - HAL1b LINE L1 -694 654 334 333 0 0 0 chr2 81770843 81770880 -168916974 + (CA)n Simple_repeat Simple_repeat 2 38 0 434 330 170 20 chr2 81771096 81771602 -168916252 + L2 LINE L2 1178 1759 -1555 629 282 133 48 chr2 81772301 81772776 -168915078 - L1MEc LINE L1 -5017 1406 892 327 349 86 12 chr2 81773141 81773479 -168914375 - L1MEc LINE L1 -6036 387 25 1991 128 7 0 chr2 81773729 81774019 -168913835 + AluSx SINE Alu 1 292 -20 537 58 0 0 chr2 81774397 81774466 -168913388 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 252 0 0 0 chr2 81775230 81775258 -168912596 + (CA)n Simple_repeat Simple_repeat 1 28 0 282 333 63 35 chr2 81775680 81775854 -168912000 - MIR SINE MIR -18 244 66 5920 136 21 3 chr2 81776117 81777328 -168910526 + L1PA15 LINE L1 4921 6144 -21 28 71 0 0 chr2 81777482 81777538 -168910316 + AT_rich Low_complexity Low_complexity 1 56 0 477 206 15 69 chr2 81779159 81779290 -168908564 + MLT1C LTR MaLR 45 168 -299 2295 53 0 11 chr2 81779307 81779647 -168908207 - AluY SINE Alu 0 337 1 893 282 92 49 chr2 81780344 81781038 -168906816 + L1MEc LINE L1 39 762 -5634 530 230 11 47 chr2 81781069 81781276 -168906578 + L1MEc LINE L1 2300 2477 -3738 1069 234 75 73 chr2 81781295 81781755 -168906099 - L1ME LINE L1 -566 5669 5212 2163 113 0 6 chr2 81781755 81782066 -168905788 - AluSc SINE Alu 0 309 1 1069 234 75 73 chr2 81782066 81782547 -168905307 - L1ME LINE L1 -1023 5212 4735 272 261 43 58 chr2 81782626 81782814 -168905040 - L1ME LINE L1 -6166 230 46 492 222 12 64 chr2 81783219 81783390 -168904464 - L1MA9 LINE L1 -30 6282 6121 * 3275 105 48 4 chr2 81783383 81783920 -168903934 + L1PA10 LINE L1 5226 5785 -383 2310 105 25 49 chr2 81784023 81784431 -168903423 + L1PA10 LINE L1 5771 6168 0 1185 209 36 22 chr2 81784434 81784711 -168903143 + L1MA9 LINE L1 5594 5874 -438 244 295 78 26 chr2 81785672 81785865 -168901989 + L1ME LINE L1 5679 5881 -289 3009 99 25 0 chr2 81786085 81786519 -168901335 + LTR19B LTR ERV1 1 445 -135 1381 94 0 0 chr2 81786519 81786710 -168901144 + L1PA5 LINE L1 5964 6154 0 5096 127 19 9 chr2 81786710 81787615 -168900239 + L1P LINE L1 4184 5097 -1049 1666 150 42 7 chr2 81787727 81788014 -168899840 + THE1B LTR MaLR 67 363 -1 6965 140 32 1 chr2 81788039 81789399 -168898455 + THE1B-int LTR MaLR 146 1580 0 568 148 69 0 chr2 81789403 81789504 -168898350 + THE1B LTR MaLR 5 112 -263 244 181 0 56 chr2 81789539 81789611 -168898243 + A-rich Low_complexity Low_complexity 5 72 0 7688 48 7 9 chr2 81789909 81791721 -168896133 + L1PA4 LINE L1 4366 6155 0 778 156 37 0 chr2 81791721 81791856 -168895998 + LTR19B LTR ERV1 441 580 0 1953 132 7 0 chr2 81792226 81792538 -168895316 + AluSx SINE Alu 1 314 0 22 0 0 0 chr2 81792606 81792628 -168895226 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr2 81793174 81793217 -168894637 + AT_rich Low_complexity Low_complexity 1 43 0 32 26 0 0 chr2 81793360 81793399 -168894455 + AT_rich Low_complexity Low_complexity 1 39 0 33 73 0 0 chr2 81793680 81793748 -168894106 + AT_rich Low_complexity Low_complexity 1 68 0 391 335 96 39 chr2 81794396 81794781 -168893073 + L2 LINE L2 762 1168 -2146 1248 157 66 72 chr2 81794815 81795120 -168892734 + AluJo SINE Alu 9 311 -1 266 96 0 19 chr2 81795121 81795173 -168892681 + (CAAG)n Simple_repeat Simple_repeat 2 52 0 510 360 93 0 chr2 81795490 81795779 -168892075 + L2 LINE L2 1256 1571 -1743 1916 156 52 6 chr2 81795779 81796126 -168891728 + THE1B LTR MaLR 1 363 -1 7168 138 27 1 chr2 81796151 81797518 -168890336 + THE1B-int LTR MaLR 146 1580 0 2184 146 25 3 chr2 81797518 81797874 -168889980 + THE1B LTR MaLR 1 364 0 379 346 77 4 chr2 81797877 81798137 -168889717 + L2 LINE L2 1570 1848 -1466 28 48 0 0 chr2 81798390 81798432 -168889422 + AT_rich Low_complexity Low_complexity 1 42 0 6919 173 45 7 chr2 81798525 81799759 -168888095 + ERVL LTR ERVL 4151 5431 -333 476 278 84 49 chr2 81801131 81801739 -168886115 + L1M4 LINE L1 4762 5390 -756 2248 188 46 9 chr2 81801951 81802453 -168885401 + LTR27 LTR ERV1 3 490 -11 180 0 0 0 chr2 81803096 81803116 -168884738 + (TTTAA)n Simple_repeat Simple_repeat 2 21 0 288 0 0 0 chr2 81803116 81803148 -168884706 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 2144 58 10 24 chr2 81803155 81803447 -168884407 - AluY SINE Alu -23 288 1 1876 147 3 10 chr2 81803450 81803749 -168884105 - AluSq SINE Alu -16 297 1 552 15 0 0 chr2 81803922 81803987 -168883867 + (TTA)n Simple_repeat Simple_repeat 2 66 0 2035 131 7 7 chr2 81804344 81804641 -168883213 + AluSx SINE Alu 1 297 -15 218 222 25 25 chr2 81804658 81804739 -168883115 + (TTAAA)n Simple_repeat Simple_repeat 3 83 0 233 213 0 0 chr2 81805519 81805566 -168882288 + GA-rich Low_complexity Low_complexity 2 48 0 608 222 0 0 chr2 81806189 81806315 -168881539 - L1PB4 LINE L1 -7 6149 6024 4165 212 16 4 chr2 81806315 81807268 -168880586 - L1 LINE L1 -886 5260 4297 549 150 0 0 chr2 81808070 81808170 -168879684 + (CCTA)n Simple_repeat Simple_repeat 1 100 0 334 200 354 0 chr2 81808253 81808383 -168879471 - MER5B DNA MER1_type -2 176 1 316 268 21 21 chr2 81809250 81809347 -168878507 + MIR SINE MIR 65 161 -101 22 0 0 0 chr2 81809974 81809996 -168877858 + AT_rich Low_complexity Low_complexity 1 22 0 249 322 159 13 chr2 81810222 81810449 -168877405 - MIR SINE MIR 0 262 3 186 71 0 0 chr2 81810747 81810775 -168877079 + (GA)n Simple_repeat Simple_repeat 2 29 0 189 125 0 0 chr2 81810775 81810807 -168877047 + L2 LINE L2 3277 3308 -5 2036 191 45 27 chr2 81811832 81812281 -168875573 + MSTB2 LTR MaLR 1 457 0 37 39 0 0 chr2 81812640 81812691 -168875163 + AT_rich Low_complexity Low_complexity 1 51 0 253 257 10 50 chr2 81813006 81813107 -168874747 - L1M3 LINE L1 -410 5773 5677 234 239 14 42 chr2 81813086 81813157 -168874697 + L1MC4 LINE L1 6634 6702 -1340 * 1460 239 57 71 chr2 81813175 81813556 -168874298 - L1ME1 LINE L1 -77 6089 5717 1597 191 3 20 chr2 81813556 81813855 -168873999 - AluJb SINE Alu -18 294 1 1460 239 57 71 chr2 81813855 81814020 -168873834 - L1ME1 LINE L1 -449 5717 5551 792 279 12 0 chr2 81814017 81814257 -168873597 - L1MEc LINE L1 -5439 957 715 * 438 20 0 0 chr2 81815009 81815060 -168872794 + (CA)n Simple_repeat Simple_repeat 2 52 0 22 56 0 0 chr2 81815202 81815238 -168872616 + AT_rich Low_complexity Low_complexity 1 36 0 1083 43 0 14 chr2 81815259 81815399 -168872455 - L1PA5 LINE L1 0 6154 6017 487 251 118 35 chr2 81815417 81815672 -168872182 - L1M4 LINE L1 -2915 3231 2956 335 291 62 57 chr2 81817030 81817274 -168870580 - L1MC/D LINE L1 -1996 5812 5568 713 245 6 0 chr2 81818017 81818176 -168869678 + FRAM SINE Alu 1 160 -16 2004 100 7 24 chr2 81818201 81818491 -168869363 - AluSg SINE Alu -13 297 13 3474 110 31 6 chr2 81818701 81819518 -168868336 - L1PA7 LINE L1 -289 5865 5037 564 277 94 80 chr2 81819599 81820025 -168867829 - L1MC/D LINE L1 -2005 5803 5372 259 307 20 0 chr2 81820318 81820419 -168867435 - L1MC4 LINE L1 -3 8039 7937 291 263 0 22 chr2 81820426 81820617 -168867237 + (TA)n Simple_repeat Simple_repeat 1 186 0 429 325 127 9 chr2 81820735 81821067 -168866787 - L1MC4 LINE L1 -271 7771 7401 411 21 0 0 chr2 81821121 81821169 -168866685 + (TTCTC)n Simple_repeat Simple_repeat 4 51 0 284 81 0 0 chr2 81821172 81821209 -168866645 - AluSp/q SINE Alu -22 281 245 210 296 15 37 chr2 81821220 81821355 -168866499 + CT-rich Low_complexity Low_complexity 3 134 0 602 209 172 0 chr2 81821698 81821861 -168865993 + MLT2B2 LTR ERVL 324 514 -1 2140 199 17 54 chr2 81821866 81822538 -168865316 - L1M3 LINE L1 -375 5793 5146 639 187 8 22 chr2 81822530 81822664 -168865190 + L1 LINE L1 4471 4602 -1544 * 1087 154 121 39 chr2 81822807 81823087 -168864767 + L1MA9 LINE L1 5993 6295 -17 275 164 0 30 chr2 81823076 81823143 -168864711 + L1 LINE L1 4599 4663 -1483 * 1793 193 40 0 chr2 81823137 81823490 -168864364 + L1MC1 LINE L1 5486 5852 -481 1301 224 10 21 chr2 81823490 81823780 -168864074 + AluJo SINE Alu 1 287 -25 1501 119 0 9 chr2 81823808 81824026 -168863828 + AluSx SINE Alu 1 216 -96 1731 230 15 31 chr2 81824052 81824508 -168863346 + L1 LINE L1 4676 5124 -1022 254 340 100 47 chr2 81824519 81824871 -168862983 + L2 LINE L2 2687 3054 -259 21 0 0 0 chr2 81825305 81825326 -168862528 + AT_rich Low_complexity Low_complexity 1 21 0 402 211 26 0 chr2 81825709 81825785 -168862069 - MER45 DNA AcHobo 0 1581 1504 820 222 159 29 chr2 81825805 81826091 -168861763 - AluJo SINE Alu 0 329 13 763 290 6 0 chr2 81826292 81826461 -168861393 - MER45C DNA AcHobo -687 266 97 1949 123 11 3 chr2 81826466 81826750 -168861104 + AluSx SINE Alu 1 286 -26 281 174 14 0 chr2 81826750 81826819 -168861035 + (TA)n Simple_repeat Simple_repeat 1 70 0 2261 57 4 7 chr2 81826868 81827148 -168860706 - AluY SINE Alu -15 296 18 21 36 0 0 chr2 81827256 81827284 -168860570 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 81828860 81828889 -168858965 + AT_rich Low_complexity Low_complexity 1 29 0 365 314 83 50 chr2 81828921 81828952 -168858902 + LTR33 LTR ERVL 3 32 -489 189 0 0 0 chr2 81828952 81828973 -168858881 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 365 314 83 50 chr2 81828973 81829183 -168858671 + LTR33 LTR ERVL 32 252 -269 573 213 0 104 chr2 81829200 81829364 -168858490 + MIR SINE MIR 3 149 -113 326 250 11 22 chr2 81829366 81829458 -168858396 + L1ME1 LINE L1 811 901 -5495 248 235 122 10 chr2 81829845 81829943 -168857911 + MLT1E2 LTR MaLR 95 203 -451 25 0 0 0 chr2 81829988 81830013 -168857841 + AT_rich Low_complexity Low_complexity 1 25 0 1349 267 41 39 chr2 81830068 81830484 -168857370 + MLT1E2 LTR MaLR 153 569 -57 1694 248 62 10 chr2 81830507 81831120 -168856734 + L1ME1 LINE L1 2386 3030 -3185 6206 93 25 0 chr2 81831122 81832213 -168855641 + L1PA8 LINE L1 5046 6159 -13 2089 230 62 63 chr2 81832217 81832714 -168855140 + L1ME1 LINE L1 4764 5260 -975 2011 106 4 4 chr2 81832714 81832987 -168854867 + AluSc SINE Alu 1 273 -36 2089 230 62 63 chr2 81832987 81833607 -168854247 + L1ME1 LINE L1 5260 5877 -358 584 299 22 44 chr2 81833611 81833736 -168854118 + L1ME1 LINE L1 5923 6049 -186 2985 77 39 32 chr2 81833736 81833774 -168854080 - MLT2A1 LTR ERVL 0 444 408 459 0 0 0 chr2 81833774 81833825 -168854029 + (TA)n Simple_repeat Simple_repeat 2 52 0 2985 77 39 32 chr2 81833825 81834227 -168853627 - MLT2A1 LTR ERVL -36 408 1 584 299 22 44 chr2 81834227 81834419 -168853435 + L1ME1 LINE L1 6049 6233 -2 1218 209 6 78 chr2 81835222 81835543 -168852311 - AluJb SINE Alu -4 298 1 24 0 0 0 chr2 81835885 81835909 -168851945 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 81836031 81836059 -168851795 + AT_rich Low_complexity Low_complexity 1 28 0 7383 31 6 0 chr2 81836945 81838326 -168849528 - L1PA4 LINE L1 -3 6152 4767 405 41 0 0 chr2 81838326 81838375 -168849479 + L1PA4 LINE L1 4725 4773 -1373 23 78 0 0 chr2 81840307 81840358 -168847496 + AT_rich Low_complexity Low_complexity 1 51 0 1350 228 146 29 chr2 81840387 81840765 -168847089 - MLT2B1 LTR ERVL -64 456 35 21 0 0 0 chr2 81841414 81841435 -168846419 + AT_rich Low_complexity Low_complexity 1 21 0 24 100 0 0 chr2 81841489 81841569 -168846285 + AT_rich Low_complexity Low_complexity 1 80 0 23 54 0 0 chr2 81842357 81842394 -168845460 + AT_rich Low_complexity Low_complexity 1 37 0 333 310 40 46 chr2 81842864 81843201 -168844653 + HAL1 LINE L1 1364 1986 -833 27 0 0 0 chr2 81843312 81843339 -168844515 + AT_rich Low_complexity Low_complexity 1 27 0 2071 99 11 0 chr2 81843834 81844117 -168843737 - AluSp SINE Alu -5 308 23 811 311 65 13 chr2 81844181 81844490 -168843364 - MLT1E3 LTR MaLR -8 616 292 218 54 0 27 chr2 81844512 81844549 -168843305 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 32 75 0 0 chr2 81844606 81844673 -168843181 + AT_rich Low_complexity Low_complexity 1 67 0 1008 61 8 8 chr2 81844676 81844807 -168843047 - AluSc SINE Alu -23 286 156 411 323 77 46 chr2 81844880 81845311 -168842543 + L1M4 LINE L1 2428 2871 -3275 23 54 0 0 chr2 81845410 81845447 -168842407 + AT_rich Low_complexity Low_complexity 1 37 0 2942 212 99 55 chr2 81846222 81846773 -168841081 - L1MC3 LINE L1 -12 7773 7248 326 250 60 0 chr2 81846773 81846857 -168840997 - MLT1F1 LTR MaLR -444 123 35 2942 212 99 55 chr2 81846857 81848373 -168839481 - L1MC3 LINE L1 -537 7248 5340 * 6804 210 31 32 chr2 81848363 81850205 -168837649 + L1M2 LINE L1 2829 4668 -1478 1183 174 0 28 chr2 81850242 81850460 -168837394 + L1M2 LINE L1 5490 5701 -611 579 333 50 14 chr2 81850500 81850797 -168837057 - L1MC4a LINE L1 -1025 6783 6476 22 80 0 0 chr2 81850901 81850951 -168836903 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 81851899 81851921 -168835933 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr2 81852736 81852774 -168835080 + AT_rich Low_complexity Low_complexity 1 38 0 4979 153 12 6 chr2 81853715 81855537 -168832317 - L1PA16 LINE L1 -9 6157 4316 792 309 140 42 chr2 81855609 81855733 -168832121 - HAL1 LINE L1 -1098 1409 1299 180 0 0 0 chr2 81855733 81855753 -168832101 + (TCTCC)n Simple_repeat Simple_repeat 4 23 0 792 309 140 42 chr2 81855753 81856057 -168831797 - HAL1 LINE L1 -1208 1299 1026 2267 99 3 0 chr2 81856057 81856351 -168831503 + AluSg SINE Alu 1 295 -15 792 309 140 42 chr2 81856351 81857075 -168830779 - HAL1 LINE L1 -1481 1026 142 195 329 87 25 chr2 81857262 81857423 -168830431 - MIR SINE MIR -5 257 87 1476 210 27 3 chr2 81857458 81857753 -168830101 - AluJb SINE Alu 0 312 11 207 0 0 0 chr2 81858415 81858438 -168829416 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 30 77 0 0 chr2 81858829 81858894 -168828960 + AT_rich Low_complexity Low_complexity 1 65 0 26 0 0 0 chr2 81859379 81859405 -168828449 + AT_rich Low_complexity Low_complexity 1 26 0 1439 239 0 17 chr2 81859623 81859920 -168827934 - AluJo SINE Alu -8 294 3 184 359 15 8 chr2 81860736 81860867 -168826987 - L2 LINE L2 -1661 1653 1522 23 0 0 0 chr2 81861599 81861622 -168826232 + AT_rich Low_complexity Low_complexity 1 23 0 1591 149 4 36 chr2 81861916 81862197 -168825657 - AluJo SINE Alu -6 306 35 189 307 124 64 chr2 81862975 81863379 -168824475 + L2 LINE L2 781 1208 -2106 1167 168 19 5 chr2 81863869 81864077 -168823777 - MER47A DNA MER2_type -154 212 2 316 310 95 39 chr2 81864256 81864488 -168823366 + HAL1 LINE L1 1234 1478 -1029 231 266 128 0 chr2 81864571 81864680 -168823174 + L1MEc LINE L1 1564 1686 -4710 234 0 0 0 chr2 81865584 81865610 -168822244 + (TG)n Simple_repeat Simple_repeat 2 27 0 210 313 119 57 chr2 81865919 81866095 -168821759 + MIR SINE MIR 6 192 -70 697 207 18 143 chr2 81866913 81867193 -168820661 - MLT1A1 LTR MaLR -120 245 1 374 326 43 11 chr2 81867246 81867430 -168820424 + MLT1J LTR MaLR 12 201 -310 21 0 0 0 chr2 81867858 81867879 -168819975 + AT_rich Low_complexity Low_complexity 1 21 0 199 273 18 0 chr2 81868165 81868220 -168819634 + MER5A DNA MER1_type 124 179 -10 314 322 34 0 chr2 81868509 81868658 -168819196 - HAL1 LINE L1 -782 1725 1572 218 259 0 19 chr2 81868739 81868793 -168819061 + CT-rich Low_complexity Low_complexity 1 53 0 313 161 31 31 chr2 81868859 81869021 -168818833 + (TA)n Simple_repeat Simple_repeat 2 163 0 753 327 107 36 chr2 81869022 81869631 -168818223 - HAL1 LINE L1 -1091 1416 765 1864 122 7 34 chr2 81869674 81870004 -168817850 - AluSx SINE Alu 0 322 1 1740 124 43 0 chr2 81870628 81870886 -168816968 + AluSx SINE Alu 25 293 -19 257 224 41 34 chr2 81874463 81874610 -168813244 + (TA)n Simple_repeat Simple_repeat 2 149 0 186 279 162 0 chr2 81874996 81875064 -168812790 + MIR SINE MIR 66 144 -118 283 340 6 0 chr2 81875652 81875675 -168812179 - L1MA10 LINE L1 0 6334 6312 2733 271 31 38 chr2 81875675 81877052 -168810802 - L1ME1 LINE L1 -14 6221 4843 632 311 97 28 chr2 81877143 81877976 -168809878 - L1ME1 LINE L1 -4537 1859 969 1699 223 3 3 chr2 81877976 81878317 -168809537 - MLT2C1 LTR ERVL -56 341 1 260 316 59 43 chr2 81878327 81878514 -168809340 - L1ME1 LINE L1 -6123 273 84 424 246 0 67 chr2 81880557 81880691 -168807163 + FLAM_C SINE Alu 1 125 -8 25 51 0 0 chr2 81880992 81881031 -168806823 + AT_rich Low_complexity Low_complexity 1 39 0 1502 183 3 31 chr2 81881242 81881570 -168806284 - AluJo SINE Alu 0 320 1 403 281 82 36 chr2 81882599 81882816 -168805038 + HAL1 LINE L1 1233 1467 -1040 261 0 0 0 chr2 81882816 81882845 -168805009 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 403 281 82 36 chr2 81882845 81882908 -168804946 + HAL1 LINE L1 1467 1526 -981 2126 74 0 37 chr2 81882990 81883322 -168804532 + AluY SINE Alu 1 321 0 2319 87 3 0 chr2 81884197 81884508 -168803346 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 81885992 81886018 -168801836 + AT_rich Low_complexity Low_complexity 1 26 0 687 247 67 74 chr2 81886051 81886370 -168801484 - L1ME LINE L1 -572 5597 5284 2137 128 0 0 chr2 81886370 81886675 -168801179 - AluSq SINE Alu -8 305 1 687 247 67 74 chr2 81886675 81886904 -168800950 - L1ME LINE L1 -885 5284 5055 462 241 41 21 chr2 81888909 81889054 -168798800 + L1MC4a LINE L1 7084 7231 -577 2148 113 3 3 chr2 81889064 81889364 -168798490 + AluSx SINE Alu 1 300 -12 272 293 20 10 chr2 81889494 81889593 -168798261 + MIR3 SINE MIR 56 155 -53 465 234 241 0 chr2 81889604 81889745 -168798109 + MER5A DNA MER1_type 9 183 -6 950 130 0 0 chr2 81889766 81889897 -168797957 + FLAM_C SINE Alu 2 132 -11 453 248 14 35 chr2 81889954 81890095 -168797759 + MIR SINE MIR 123 260 -2 1734 149 76 0 chr2 81890518 81890793 -168797061 + AluSg SINE Alu 1 296 -14 2639 200 39 37 chr2 81891728 81892896 -168794958 - L1MCb LINE L1 -4526 2038 768 827 197 52 28 chr2 81893000 81893213 -168794641 + L1MC2 LINE L1 6125 6342 -2 1167 285 110 34 chr2 81893539 81894101 -168793753 - L2 LINE L2 -714 2600 1996 319 313 55 40 chr2 81894958 81895159 -168792695 + MIR SINE MIR 32 235 -27 1192 266 90 64 chr2 81895363 81895562 -168792292 + L1M4 LINE L1 3669 3861 -2285 246 32 0 0 chr2 81895562 81895593 -168792261 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1192 266 90 64 chr2 81895593 81896240 -168791614 + L1M4 LINE L1 3861 4537 -1609 1032 124 0 0 chr2 81896241 81896394 -168791460 - AluSg/x SINE Alu -17 293 141 548 162 79 8 chr2 81896395 81896625 -168791229 + L1PA10 LINE L1 5764 6014 -158 1849 92 20 48 chr2 81897362 81897680 -168790174 - AluY SINE Alu 0 310 1 2173 104 0 30 chr2 81897682 81897980 -168789874 - AluSx SINE Alu -17 295 7 1923 168 0 0 chr2 81897985 81898289 -168789565 - AluJb SINE Alu -8 304 1 3585 56 0 0 chr2 81898422 81898869 -168788985 + L1PA7 LINE L1 5699 6145 -9 1991 126 3 3 chr2 81899205 81899506 -168788348 + AluSx SINE Alu 1 301 -11 1955 85 8 4 chr2 81899578 81899838 -168788016 + AluSp SINE Alu 39 299 -14 320 51 64 26 chr2 81901047 81901125 -168786729 + (TA)n Simple_repeat Simple_repeat 2 82 0 2559 119 29 11 chr2 81901125 81901570 -168786284 - L1MA3 LINE L1 -15 6290 5838 288 314 10 20 chr2 81901578 81901680 -168786174 - MER5A DNA MER1_type -88 101 1 234 0 0 0 chr2 81903164 81903190 -168784664 + (A)n Simple_repeat Simple_repeat 1 26 0 1368 68 42 5 chr2 81903681 81903871 -168783983 + AluSg/x SINE Alu 107 303 -9 225 182 13 39 chr2 81904096 81904173 -168783681 + (TATATG)n Simple_repeat Simple_repeat 2 76 0 244 206 27 14 chr2 81904195 81904268 -168783586 - L1M4 LINE L1 -1104 5042 4969 300 305 84 18 chr2 81904382 81904608 -168783246 - L1M4 LINE L1 -1481 4665 4425 456 314 76 19 chr2 81904718 81904982 -168782872 - L1M4 LINE L1 -1869 4277 3999 * 12854 206 40 19 chr2 81904979 81906909 -168780945 - L1MA4 LINE L1 -2 6480 4592 189 0 0 0 chr2 81906909 81906930 -168780924 + (TG)n Simple_repeat Simple_repeat 2 22 0 12854 206 40 19 chr2 81906930 81909751 -168778103 - L1MA4 LINE L1 -1890 4592 1628 1082 108 6 0 chr2 81909751 81909918 -168777936 - L1P LINE L1 -861 5285 5118 327 289 0 0 chr2 81909941 81910031 -168777823 - L1MA4 LINE L1 -4707 1621 1532 5758 109 52 0 chr2 81910067 81911007 -168776847 - L1PA10 LINE L1 -10 6158 5203 6570 161 28 15 chr2 81911009 81912240 -168775614 - L1PA10 LINE L1 -2811 3335 2088 1893 218 29 38 chr2 81912222 81913038 -168774816 - L1MA4 LINE L1 -4065 1263 714 * 22 35 0 0 chr2 81913060 81913089 -168774765 + AT_rich Low_complexity Low_complexity 1 29 0 14537 185 108 38 chr2 81913272 81914790 -168773064 + L1PB1 LINE L1 156 1567 -5300 1580 189 4 7 chr2 81914790 81915071 -168772783 + AluJo SINE Alu 1 280 -32 266 0 29 0 chr2 81915077 81915111 -168772743 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 14537 185 108 38 chr2 81915111 81917499 -168770355 + L1PB1 LINE L1 1571 3792 -3075 1224 106 5 92 chr2 81917499 81917716 -168770138 + AluSc SINE Alu 1 198 -111 14537 185 108 38 chr2 81917716 81918104 -168769750 + L1PB1 LINE L1 3792 4152 -2715 216 0 0 0 chr2 81918104 81918128 -168769726 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 14537 185 108 38 chr2 81918128 81919794 -168768060 + L1PB1 LINE L1 4152 6822 -45 319 171 81 54 chr2 81919795 81919906 -168767948 - MER6 DNA MER2_type -137 728 615 25 0 0 0 chr2 81920293 81920318 -168767536 + AT_rich Low_complexity Low_complexity 1 25 0 26 0 0 0 chr2 81920836 81920862 -168766992 + AT_rich Low_complexity Low_complexity 1 26 0 738 392 28 34 chr2 81921237 81921849 -168766005 + MER115 DNA AcHobo 78 685 -8 24 0 0 0 chr2 81922051 81922075 -168765779 + AT_rich Low_complexity Low_complexity 1 24 0 329 336 52 20 chr2 81922449 81922699 -168765155 - HAL1 LINE L1 -892 1615 1358 24 0 0 0 chr2 81922923 81922947 -168764907 + AT_rich Low_complexity Low_complexity 1 24 0 3015 138 16 6 chr2 81923599 81924108 -168763746 - L1MA5A LINE L1 -36 6261 5748 5115 249 41 41 chr2 81924116 81926099 -168761755 - L1M2c LINE L1 -4971 1818 3 580 323 86 47 chr2 81926775 81927416 -168760438 - L1M4 LINE L1 -964 5182 4517 660 317 63 34 chr2 81928117 81928496 -168759358 + L2 LINE L2 2924 3313 0 24 32 0 0 chr2 81928496 81928527 -168759327 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr2 81930047 81930082 -168757772 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 81930203 81930226 -168757628 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 81930964 81930992 -168756862 + AT_rich Low_complexity Low_complexity 1 28 0 3273 200 9 3 chr2 81931184 81931825 -168756029 + L1PA16 LINE L1 5506 6150 -16 29 0 0 0 chr2 81931908 81931937 -168755917 + AT_rich Low_complexity Low_complexity 1 29 0 339 228 0 11 chr2 81932084 81932176 -168755678 - L1MA5A LINE L1 -2 6295 6205 22 0 0 0 chr2 81932278 81932300 -168755554 + AT_rich Low_complexity Low_complexity 1 22 0 383 163 0 93 chr2 81932514 81932600 -168755254 + MER2 DNA MER2_type 1 78 -267 1249 120 110 10 chr2 81932780 81932989 -168754865 - MER30 DNA MER1_type 0 230 1 491 68 54 0 chr2 81933740 81933814 -168754040 - MADE1 DNA Mariner -2 78 1 2419 219 60 2 chr2 81933856 81934386 -168753468 - MER68 LTR ERV1 0 562 2 538 297 78 23 chr2 81934508 81934727 -168753127 - MIR SINE MIR -21 241 11 256 330 17 8 chr2 81934981 81935099 -168752755 + MLT1L LTR MaLR 497 615 0 405 369 88 29 chr2 81935174 81935583 -168752271 - L2 LINE L2 -339 2975 2543 1141 167 6 176 chr2 81935617 81935964 -168751890 - AluJo SINE Alu -13 289 2 303 215 118 21 chr2 81936034 81936127 -168751727 - L1M4 LINE L1 -825 5321 5220 227 246 0 53 chr2 81936303 81936360 -168751494 - L1M4 LINE L1 -2323 3823 3770 * 2211 220 87 56 chr2 81936351 81936890 -168750964 + L1MC3 LINE L1 6283 6849 -936 282 29 0 0 chr2 81936890 81936925 -168750929 + (CA)n Simple_repeat Simple_repeat 2 36 0 2211 220 87 56 chr2 81936925 81937061 -168750793 + L1MC3 LINE L1 6849 6979 -806 1119 230 25 83 chr2 81937061 81937280 -168750574 - MLT1A2 LTR MaLR 0 374 187 561 79 0 0 chr2 81937280 81937356 -168750498 + MADE1 DNA Mariner 4 79 -1 1119 230 25 83 chr2 81937356 81937531 -168750323 - MLT1A2 LTR MaLR -187 187 3 1998 222 34 0 chr2 81937542 81937957 -168749897 - MLT1A2-int LTR MaLR -7 1728 1300 445 132 26 0 chr2 81937952 81938028 -168749826 - MLT1A2-int LTR MaLR -1633 102 25 * 1023 233 30 19 chr2 81938033 81938303 -168749551 + L1MC3 LINE L1 6978 7250 -535 203 133 0 0 chr2 81938590 81938620 -168749234 + (TG)n Simple_repeat Simple_repeat 1 30 0 26 30 0 0 chr2 81938765 81938798 -168749056 + AT_rich Low_complexity Low_complexity 1 33 0 1418 207 36 3 chr2 81939035 81939339 -168748515 - L1MB1 LINE L1 -13 6155 5842 306 149 0 0 chr2 81939350 81939397 -168748457 + MLT1A1 LTR MaLR 1 47 -318 5599 16 0 0 chr2 81939406 81940044 -168747810 + L1PA3 LINE L1 5517 6154 -1 236 204 0 0 chr2 81940055 81940104 -168747750 + A-rich Low_complexity Low_complexity 1 49 0 1253 213 48 8 chr2 81940371 81940620 -168747234 + MLT1A1 LTR MaLR 107 365 0 320 153 57 0 chr2 81940620 81940705 -168747149 - L1MB1 LINE L1 -333 5835 5746 408 316 97 44 chr2 81940898 81941322 -168746532 + L2 LINE L2 2660 3106 -207 1816 247 47 21 chr2 81941340 81941809 -168746045 - MLT1D LTR MaLR -22 483 3 422 354 7 0 chr2 81941812 81941956 -168745898 + L2 LINE L2 3144 3288 -25 2875 23 0 12 chr2 81942491 81942837 -168745017 - L1PA4 LINE L1 0 6155 5814 807 204 17 0 chr2 81943860 81944032 -168743822 + L1MA9 LINE L1 3606 3780 -2366 1349 140 65 0 chr2 81944034 81944263 -168743591 - MER4A LTR ERV1 0 664 421 2326 215 47 10 chr2 81944265 81945664 -168742190 + L1MA9 LINE L1 4853 6311 -1 282 247 37 0 chr2 81945885 81945966 -168741888 + GA-rich Low_complexity Low_complexity 1 84 0 474 219 167 0 chr2 81946027 81946141 -168741713 + FLAM_A SINE Alu 1 133 0 1606 98 4 45 chr2 81946321 81946566 -168741288 + MER52C LTR ERV1 1044 1278 0 21 36 0 0 chr2 81947680 81947708 -168740146 + AT_rich Low_complexity Low_complexity 1 28 0 1478 257 49 94 chr2 81948179 81948794 -168739060 + MLT1E LTR MaLR 2 588 -5 288 111 0 0 chr2 81949180 81949225 -168738629 + (TG)n Simple_repeat Simple_repeat 2 46 0 28 0 0 0 chr2 81950149 81950177 -168737677 + AT_rich Low_complexity Low_complexity 1 28 0 830 152 0 0 chr2 81951107 81951258 -168736596 + L1MA7 LINE L1 6130 6280 -11 1417 215 7 10 chr2 81951469 81951767 -168736087 + AluJo SINE Alu 6 302 -10 220 216 0 0 chr2 81951772 81951823 -168736031 + (TA)n Simple_repeat Simple_repeat 2 52 0 2117 252 89 22 chr2 81952013 81953436 -168734418 + L1MEc LINE L1 1699 3156 -3059 240 321 28 9 chr2 81953436 81953542 -168734312 + MLT1C LTR MaLR 146 253 -214 734 289 10 10 chr2 81953648 81953856 -168733998 + MLT1C LTR MaLR 260 467 0 1025 212 34 15 chr2 81953859 81954123 -168733731 + L1MC3 LINE L1 7494 7762 -23 1963 133 74 0 chr2 81954250 81954589 -168733265 + THE1B LTR MaLR 1 364 0 244 145 16 16 chr2 81955293 81955355 -168732499 + (CATAT)n Simple_repeat Simple_repeat 2 63 0 21 0 0 0 chr2 81956370 81956391 -168731463 + AT_rich Low_complexity Low_complexity 1 21 0 4272 157 12 30 chr2 81957176 81957997 -168729857 + L1PB4 LINE L1 5338 6143 -13 1683 139 99 37 chr2 81958047 81958400 -168729454 + THE1C LTR MaLR 1 375 0 21 36 0 0 chr2 81958973 81959001 -168728853 + AT_rich Low_complexity Low_complexity 1 28 0 3158 214 35 10 chr2 81959021 81959713 -168728141 - L1MB2 LINE L1 -2 7129 6421 184 172 35 0 chr2 81959836 81959894 -168727960 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 292 240 31 0 chr2 81960206 81960302 -168727552 + (TA)n Simple_repeat Simple_repeat 2 100 0 1461 177 64 6 chr2 81960378 81960723 -168727131 - L1MA6 LINE L1 0 6300 5936 4831 212 79 8 chr2 81960723 81961932 -168725922 - L1MB2 LINE L1 -1491 5615 4322 702 296 0 5 chr2 81961969 81962185 -168725669 + L1 LINE L1 2430 2644 -3502 * 1146 239 9 42 chr2 81962183 81962291 -168725563 - L1MB2 LINE L1 -4769 2337 2227 2148 108 0 13 chr2 81962291 81962597 -168725257 - AluY SINE Alu -9 302 1 1146 239 9 42 chr2 81962597 81962823 -168725031 - L1MB2 LINE L1 -4879 2227 2014 950 82 0 0 chr2 81962824 81962946 -168724908 - AluY SINE Alu -13 298 177 2776 283 56 26 chr2 81962946 81963192 -168724662 - L1MB2 LINE L1 -5080 2026 1789 219 36 0 0 chr2 81963192 81963220 -168724634 + (TG)n Simple_repeat Simple_repeat 1 28 0 2776 283 56 26 chr2 81963220 81964294 -168723560 - L1MB2 LINE L1 -5317 1789 20 51 58 0 0 chr2 81964465 81964551 -168723303 + AT_rich Low_complexity Low_complexity 1 86 0 402 283 143 52 chr2 81964673 81965443 -168722411 + L1ME LINE L1 2222 3061 -3085 397 287 132 64 chr2 81965666 81965821 -168722033 + L1ME LINE L1 4501 4644 -1502 195 42 0 0 chr2 81965821 81965845 -168722009 + (TG)n Simple_repeat Simple_repeat 2 25 0 397 287 132 64 chr2 81965845 81966507 -168721347 + L1ME LINE L1 4644 5374 -772 34 45 0 15 chr2 81966546 81966577 -168721277 + AT_rich Low_complexity Low_complexity 1 31 -34 2279 74 0 3 chr2 81966577 81966862 -168720992 + AluSq SINE Alu 9 292 -21 34 45 0 15 chr2 81966862 81966896 -168720958 + AT_rich Low_complexity Low_complexity 31 65 0 379 262 136 14 chr2 81966938 81967119 -168720735 + L1ME LINE L1 5587 5787 -375 2084 130 3 0 chr2 81969328 81969627 -168718227 + AluSx SINE Alu 1 300 -12 327 302 126 22 chr2 81972989 81973171 -168714683 + HAL1 LINE L1 962 1162 -1345 8966 179 10 12 chr2 81973172 81974147 -168713707 - L1PA13 LINE L1 -3 6160 5184 1765 174 0 3 chr2 81974147 81974434 -168713420 - AluJb SINE Alu -20 292 7 8966 179 10 12 chr2 81974434 81975978 -168711876 - L1PA13 LINE L1 -979 5184 3630 4800 212 24 4 chr2 81975978 81977059 -168710795 + L1PA13 LINE L1 2543 3645 -2501 231 236 47 71 chr2 81977081 81977208 -168710646 + HAL1 LINE L1 1182 1305 -1202 2281 99 16 19 chr2 81977311 81977556 -168710298 - L1PA8A LINE L1 -528 5603 5357 1111 23 0 0 chr2 81977556 81977688 -168710166 - L1PA7 LINE L1 -4 6150 6019 2281 99 16 19 chr2 81977688 81977893 -168709961 - L1PA8A LINE L1 -774 5357 5153 3650 100 10 2 chr2 81977893 81978414 -168709440 + L1PA8A LINE L1 5607 6131 0 324 307 93 43 chr2 81980532 81980672 -168707182 + MIR3 SINE MIR 57 203 -5 232 219 149 35 chr2 81980720 81980834 -168707020 - MER103 DNA DNA -5 161 35 198 0 0 0 chr2 81982770 81982792 -168705062 + (A)n Simple_repeat Simple_repeat 1 22 0 28 61 0 0 chr2 81983562 81983611 -168704243 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr2 81983642 81983664 -168704190 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr2 81984211 81984249 -168703605 + AT_rich Low_complexity Low_complexity 1 38 0 288 0 0 0 chr2 81984285 81984317 -168703537 + (TG)n Simple_repeat Simple_repeat 2 33 0 2219 57 0 0 chr2 81984856 81985139 -168702715 + L1PA4 LINE L1 5873 6155 0 189 0 0 0 chr2 81985162 81985183 -168702671 + (A)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr2 81986153 81986181 -168701673 + AT_rich Low_complexity Low_complexity 1 28 0 2252 94 0 3 chr2 81986581 81986879 -168700975 + AluSg SINE Alu 1 297 -13 227 213 0 21 chr2 81988082 81988129 -168699725 + (CATATA)n Simple_repeat Simple_repeat 4 49 0 361 333 41 7 chr2 81988661 81988808 -168699046 - L2 LINE L2 -1 3312 3161 1372 177 28 7 chr2 81990256 81990538 -168697316 + L1MA4 LINE L1 6003 6290 -10 21 0 0 0 chr2 81990780 81990801 -168697053 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 81991064 81991087 -168696767 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 81992378 81992408 -168695446 + AT_rich Low_complexity Low_complexity 1 30 0 392 265 129 21 chr2 81993015 81993261 -168694593 + HsTC2 DNA Tc2 1306 1739 -159 1568 161 39 23 chr2 81994072 81994377 -168693477 + AluSx SINE Alu 1 310 -2 13753 39 1 0 chr2 81994377 81996854 -168691000 + L1PA4 LINE L1 3691 6165 0 23 0 0 0 chr2 81997421 81997444 -168690410 + GC_rich Low_complexity Low_complexity 1 23 0 23 92 0 0 chr2 81997838 81997903 -168689951 + AT_rich Low_complexity Low_complexity 1 65 0 1130 189 43 24 chr2 81998195 81998449 -168689405 + MER58B DNA MER1_type 47 305 -36 2644 195 29 0 chr2 81999748 82000275 -168687579 - MER34 LTR ERV1 0 542 1 23 0 0 0 chr2 82000407 82000430 -168687424 + AT_rich Low_complexity Low_complexity 1 23 0 623 262 30 18 chr2 82001345 82001393 -168686461 - MER5A DNA MER1_type -1 188 142 7491 31 0 0 chr2 82001393 82002449 -168685405 + L1PA4 LINE L1 5097 6152 -3 623 262 30 18 chr2 82002449 82002568 -168685286 - MER5A DNA MER1_type -47 142 19 289 267 29 48 chr2 82002598 82002703 -168685151 + MIR SINE MIR 70 172 -90 338 309 55 12 chr2 82004346 82004511 -168683343 - L1ME LINE L1 -657 5507 5336 301 119 68 0 chr2 82004516 82004575 -168683279 - MLT1G1 LTR MaLR -520 75 13 1012 101 0 0 chr2 82005609 82005747 -168682107 - AluSg/x SINE Alu -19 293 156 26 0 0 0 chr2 82005868 82005894 -168681960 + AT_rich Low_complexity Low_complexity 1 26 0 717 239 17 11 chr2 82006155 82006331 -168681523 + MER45 DNA AcHobo 6 182 -1399 * 1520 249 69 17 chr2 82006328 82006460 -168681394 + MLT1E2 LTR MaLR 136 260 -366 2224 105 9 0 chr2 82006460 82006794 -168681060 + L1PA13 LINE L1 5825 6161 -2 1520 249 69 17 chr2 82006794 82007126 -168680728 + MLT1E2 LTR MaLR 260 624 -2 202 191 0 43 chr2 82008114 82008161 -168679693 + (TATG)n Simple_repeat Simple_repeat 2 46 0 21 57 0 0 chr2 82008192 82008227 -168679627 + AT_rich Low_complexity Low_complexity 1 35 0 636 170 0 0 chr2 82008367 82008473 -168679381 - FLAM_C SINE Alu -37 106 1 23 33 0 0 chr2 82009181 82009211 -168678643 + AT_rich Low_complexity Low_complexity 1 30 0 7373 33 0 1 chr2 82009218 82010745 -168677109 - L1PA4 LINE L1 -1 6154 4629 298 298 71 0 chr2 82011109 82011193 -168676661 + L1M4b LINE L1 271 360 -6499 * 781 253 10 52 chr2 82011191 82011499 -168676355 + L1M4b LINE L1 1847 2141 -4818 491 235 25 41 chr2 82011493 82011689 -168676165 + L1M4b LINE L1 2352 2544 -4594 * 1962 181 21 59 chr2 82011689 82011769 -168676085 + L1M4 LINE L1 5203 5285 -899 1726 156 46 40 chr2 82011769 82012142 -168675712 - THE1C LTR MaLR 0 375 1 1962 181 21 59 chr2 82012142 82012566 -168675288 + L1M4 LINE L1 5285 5682 -502 690 262 148 0 chr2 82012683 82012885 -168674969 + MLT1E2 LTR MaLR 395 626 0 432 234 7 80 chr2 82012915 82013052 -168674802 + L2 LINE L2 3187 3313 0 192 305 47 31 chr2 82014665 82014793 -168673061 - L2 LINE L2 -730 2584 2455 2266 83 0 35 chr2 82014808 82015120 -168672734 - AluSx SINE Alu -11 301 1 362 268 0 7 chr2 82015278 82015431 -168672423 + (TA)n Simple_repeat Simple_repeat 2 153 0 3598 213 19 51 chr2 82015512 82016162 -168671692 + MER45B DNA AcHobo 1 619 -421 917 141 11 27 chr2 82016162 82016346 -168671508 + L1MB8 LINE L1 5988 6168 -10 3598 213 19 51 chr2 82016346 82016540 -168671314 + MER45B DNA AcHobo 619 818 -222 1098 237 27 97 chr2 82017190 82017675 -168670179 - LTR38 LTR ERV1 -9 547 97 246 304 25 6 chr2 82018954 82019112 -168668742 + L1MDb LINE L1 1179 1339 -5070 309 209 0 0 chr2 82019143 82019210 -168668644 + (CATA)n Simple_repeat Simple_repeat 2 68 0 3218 188 10 18 chr2 82019215 82019897 -168667957 + L1 LINE L1 3765 4441 -1705 198 71 0 0 chr2 82020349 82020377 -168667477 + (CA)n Simple_repeat Simple_repeat 2 29 0 335 258 83 0 chr2 82021156 82021276 -168666578 + L1M4b LINE L1 2581 2710 -4247 25 0 0 0 chr2 82022703 82022728 -168665126 + AT_rich Low_complexity Low_complexity 1 25 0 1804 227 48 25 chr2 82023005 82023525 -168664329 - L1MD3 LINE L1 -53 7942 7411 1021 25 0 0 chr2 82023603 82023723 -168664131 + AluY SINE Alu 192 311 0 249 200 33 0 chr2 82023724 82023784 -168664070 - L1MD3 LINE L1 -828 7167 7106 * 2697 270 67 43 chr2 82023776 82025460 -168662394 - L1MDb LINE L1 -1006 5400 3678 262 279 84 7 chr2 82025466 82025620 -168662234 - L1MDb LINE L1 -2815 3591 3426 * 4239 200 8 7 chr2 82025592 82026507 -168661347 - L1 LINE L1 -1466 4940 4025 309 209 0 0 chr2 82026512 82026579 -168661275 + (TATG)n Simple_repeat Simple_repeat 2 68 0 246 304 25 6 chr2 82026610 82026768 -168661086 - L1MDb LINE L1 -5070 1339 1179 1097 237 27 97 chr2 82028047 82028532 -168659322 + LTR38 LTR ERV1 97 547 -9 3598 213 19 51 chr2 82029182 82029376 -168658478 - MER45B DNA AcHobo -222 818 619 963 130 11 27 chr2 82029376 82029560 -168658294 - L1MB8 LINE L1 -10 6168 5988 3598 213 19 51 chr2 82029560 82030210 -168657644 - MER45B DNA AcHobo -421 619 1 362 268 0 7 chr2 82030291 82030444 -168657410 + (TA)n Simple_repeat Simple_repeat 2 153 0 2286 80 0 35 chr2 82030603 82030915 -168656939 + AluSx SINE Alu 1 301 -11 255 299 69 107 chr2 82030930 82031408 -168656446 + L2 LINE L2 2455 2914 -400 208 313 0 38 chr2 82031410 82031490 -168656364 + CT-rich Low_complexity Low_complexity 4 80 0 330 347 66 78 chr2 82031506 82031840 -168656014 + L2 LINE L2 2941 3270 -2 2409 50 13 10 chr2 82031860 82032162 -168655692 - AluY SINE Alu -8 303 1 23 33 0 0 chr2 82032387 82032417 -168655437 + AT_rich Low_complexity Low_complexity 1 30 0 432 234 7 80 chr2 82034263 82034400 -168653454 - L2 LINE L2 0 3313 3187 1819 264 122 2 chr2 82034430 82034961 -168652893 - MLT1E2 LTR MaLR 0 626 32 341 163 0 12 chr2 82035071 82035151 -168652703 - L1MB1 LINE L1 -3 6881 6803 4679 128 4 8 chr2 82035151 82035865 -168651989 + LTR17 LTR ERV1 1 711 -69 2989 173 19 15 chr2 82035935 82036531 -168651323 - L1MB1 LINE L1 -185 6699 6102 1332 188 8 59 chr2 82036498 82036855 -168650999 - L1MB1 LINE L1 -2164 4698 4360 * 23 86 0 0 chr2 82037318 82037376 -168650478 + AT_rich Low_complexity Low_complexity 1 58 0 3304 259 67 38 chr2 82037410 82038301 -168649553 + L1M4 LINE L1 2522 3483 -2663 1563 204 87 20 chr2 82038301 82038702 -168649152 - MSTC LTR MaLR 0 428 1 3304 259 67 38 chr2 82038702 82039430 -168648424 + L1M4 LINE L1 3483 4188 -1958 * 4584 188 146 22 chr2 82039419 82041338 -168646516 - L1MB1 LINE L1 -4556 2307 6 1356 273 38 41 chr2 82041348 82042027 -168645827 + L1M4 LINE L1 4160 4836 -1310 368 297 74 40 chr2 82042040 82042215 -168645639 - L1MCc LINE L1 -5433 613 433 310 399 35 32 chr2 82042479 82042541 -168645313 - L1MCc LINE L1 -5688 357 297 204 40 0 0 chr2 82042541 82042566 -168645288 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 310 399 35 32 chr2 82042566 82042816 -168645038 - L1MCc LINE L1 -5748 297 44 22 0 0 0 chr2 82042891 82042913 -168644941 + AT_rich Low_complexity Low_complexity 1 22 0 1772 124 0 8 chr2 82042973 82043222 -168644632 - AluSx SINE Alu -17 295 49 3465 228 59 73 chr2 82043230 82044556 -168643298 - L1MD2 LINE L1 -20 6339 5086 2225 92 0 3 chr2 82044556 82044859 -168642995 - AluY SINE Alu -9 302 1 3465 228 59 73 chr2 82044859 82046016 -168641838 - L1MD2 LINE L1 -1273 5086 3914 6028 125 28 15 chr2 82046935 82047938 -168639916 - Tigger3b DNA MER2_type -13 1218 203 2956 167 58 11 chr2 82047939 82048503 -168639351 + MER7C DNA MER2_type 2 592 -10 928 211 108 9 chr2 82048490 82048713 -168639141 - Tigger3b DNA MER2_type -986 245 1 * 765 276 67 0 chr2 82048811 82049021 -168638833 + MER58A DNA MER1_type 1 224 0 845 284 138 43 chr2 82049240 82049631 -168638223 + LTR16A LTR ERVL 18 445 -5 217 267 228 20 chr2 82051370 82051471 -168636383 + MER5A DNA MER1_type 1 122 -67 342 254 75 8 chr2 82051875 82052016 -168635838 + MIR SINE MIR 54 202 -60 272 274 29 44 chr2 82052556 82052701 -168635153 - L1ME LINE L1 -345 5821 5674 238 310 28 0 chr2 82053465 82053536 -168634318 - MLT1K LTR MaLR -342 246 174 31 0 0 0 chr2 82054307 82054338 -168633516 + AT_rich Low_complexity Low_complexity 1 31 0 262 305 112 43 chr2 82055305 82055492 -168632362 + MIR SINE MIR 20 219 -43 474 285 15 7 chr2 82055608 82055742 -168632112 + MLT1E1 LTR MaLR 1 135 -519 1911 279 50 61 chr2 82055742 82056566 -168631288 + MER21B LTR ERV1 1 815 -48 1977 258 39 4 chr2 82056594 82057082 -168630772 + MLT1E1 LTR MaLR 150 654 0 2340 93 0 3 chr2 82058164 82058474 -168629380 + AluSc SINE Alu 1 309 0 2048 104 3 14 chr2 82058600 82058889 -168628965 - AluSq SINE Alu -27 286 1 1167 0 0 0 chr2 82061091 82061222 -168626632 + AluY SINE Alu 179 309 -2 318 313 0 0 chr2 82061282 82061378 -168626476 + MIR SINE MIR 166 261 -1 180 0 0 0 chr2 82062723 82062743 -168625111 + (TTG)n Simple_repeat Simple_repeat 2 21 0 462 303 72 20 chr2 82062743 82062938 -168624916 - MER21B LTR ERV1 -570 293 89 1002 135 0 0 chr2 82062938 82063079 -168624775 - AluSg/x SINE Alu -18 294 154 710 279 118 85 chr2 82063890 82063970 -168623884 + MER21B LTR ERV1 15 91 -772 2119 122 0 10 chr2 82063970 82064266 -168623588 + AluSx SINE Alu 1 293 -19 710 279 118 85 chr2 82064266 82064461 -168623393 + MER21B LTR ERV1 91 278 -585 207 0 0 0 chr2 82064461 82064484 -168623370 + (CAA)n Simple_repeat Simple_repeat 2 24 0 710 279 118 85 chr2 82064484 82064773 -168623081 + MER21B LTR ERV1 278 599 -264 520 295 71 49 chr2 82065136 82065360 -168622494 - L2 LINE L2 -537 2777 2549 233 175 63 0 chr2 82065502 82065565 -168622289 + L1MC4 LINE L1 6637 6703 -1339 214 171 49 0 chr2 82065565 82065606 -168622248 + (TATATG)n Simple_repeat Simple_repeat 1 43 0 244 196 128 59 chr2 82065606 82065708 -168622146 + L1MC4 LINE L1 6615 6723 -1319 * 1572 214 111 33 chr2 82065681 82066142 -168621712 - L1M3 LINE L1 -382 5786 5363 213 94 0 0 chr2 82066142 82066174 -168621680 + (TTTTA)n Simple_repeat Simple_repeat 3 34 0 1572 214 111 33 chr2 82066174 82066542 -168621312 - L1M3 LINE L1 -805 5363 4879 290 353 76 50 chr2 82066602 82067021 -168620833 + L2 LINE L2 2485 2914 -400 1596 178 44 12 chr2 82067047 82067389 -168620465 - MSTC LTR MaLR 0 428 1 229 154 19 19 chr2 82067392 82067444 -168620410 + CT-rich Low_complexity Low_complexity 4 55 0 356 55 18 0 chr2 82067817 82067872 -168619982 + (GA)n Simple_repeat Simple_repeat 1 56 0 556 96 0 0 chr2 82068308 82068414 -168619440 - AluY SINE Alu 0 311 205 25 0 0 0 chr2 82070058 82070083 -168617771 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 82071485 82071507 -168616347 + AT_rich Low_complexity Low_complexity 1 22 0 417 267 72 58 chr2 82071819 82072031 -168615823 + MLT1I LTR MaLR 104 294 -115 2542 160 11 5 chr2 82072850 82073293 -168614561 - L1PA16 LINE L1 0 6166 5721 24 0 0 0 chr2 82073472 82073496 -168614358 + AT_rich Low_complexity Low_complexity 1 24 0 458 310 9 35 chr2 82073672 82073904 -168613950 - L1ME LINE L1 -405 5716 5491 317 328 92 0 chr2 82074076 82074207 -168613647 + MIR SINE MIR 119 261 -1 517 264 57 21 chr2 82074437 82074577 -168613277 + MER5A DNA MER1_type 45 189 0 383 320 151 18 chr2 82074606 82074831 -168613023 + MIR SINE MIR 3 257 -5 21 0 0 0 chr2 82075141 82075162 -168612692 + AT_rich Low_complexity Low_complexity 1 21 0 291 291 13 0 chr2 82075199 82075278 -168612576 - MIR3 SINE MIR -48 160 81 32 86 0 0 chr2 82075647 82075728 -168612126 + AT_rich Low_complexity Low_complexity 1 81 0 15635 228 27 23 chr2 82075728 82078082 -168609772 - L1PA15 LINE L1 -13 6803 4459 1697 214 130 55 chr2 82078082 82078651 -168609203 + LTR9 LTR ERV1 1 612 0 15635 228 27 23 chr2 82078651 82080571 -168607283 - L1PA15 LINE L1 -2357 4459 2547 10000 53 7 6 chr2 82080571 82082614 -168605240 + L1PA6 LINE L1 4113 6154 0 15635 228 27 23 chr2 82082614 82083486 -168604368 - L1PA15 LINE L1 -4269 2547 1679 2002 156 0 0 chr2 82083486 82083787 -168604067 + AluSx SINE Alu 1 301 -11 15635 228 27 23 chr2 82083787 82085424 -168602430 - L1PA15 LINE L1 -5137 1679 1 2462 119 14 8 chr2 82085499 82085861 -168601993 + THE1B LTR MaLR 1 364 0 206 275 0 58 chr2 82085971 82086160 -168601694 + T-rich Low_complexity Low_complexity 2 179 0 1394 211 55 40 chr2 82086358 82086756 -168601098 - L1MB8 LINE L1 -8 6170 5767 30 59 0 0 chr2 82087435 82087486 -168600368 + AT_rich Low_complexity Low_complexity 1 51 0 311 298 133 28 chr2 82087756 82087937 -168599917 + MIR SINE MIR 15 214 -48 189 373 101 25 chr2 82088173 82088331 -168599523 + L2 LINE L2 3102 3271 -1 243 364 33 0 chr2 82088484 82088605 -168599249 - MIR SINE MIR -38 224 100 1760 189 17 36 chr2 82088805 82089164 -168598690 - MER89 LTR ERV1 0 559 208 391 248 30 0 chr2 82089417 82089518 -168598336 - MER89 LTR ERV1 -453 106 3 25 31 0 0 chr2 82091668 82091700 -168596154 + AT_rich Low_complexity Low_complexity 1 32 0 28 61 0 0 chr2 82091710 82091759 -168596095 + AT_rich Low_complexity Low_complexity 1 49 0 332 227 136 45 chr2 82092552 82092699 -168595155 - MLT1G LTR MaLR 0 558 412 813 290 13 59 chr2 82092795 82093102 -168594752 - MLT1G LTR MaLR -297 293 1 189 367 70 23 chr2 82094780 82094908 -168592946 - MIR3 SINE MIR -69 139 6 653 70 10 0 chr2 82095012 82095112 -168592742 + (GA)n Simple_repeat Simple_repeat 2 102 0 190 293 24 73 chr2 82095233 82095315 -168592539 + L2 LINE L2 3212 3289 -24 1791 241 64 31 chr2 82095572 82096027 -168591827 - MLT1F1 LTR MaLR -2 565 88 2292 79 0 38 chr2 82096027 82096345 -168591509 + AluY SINE Alu 1 306 -5 1791 241 64 31 chr2 82096345 82096436 -168591418 - MLT1F1 LTR MaLR -479 88 1 532 281 100 0 chr2 82098036 82098196 -168589658 + MIR SINE MIR 78 253 -9 32 0 0 0 chr2 82098203 82098235 -168589619 + AT_rich Low_complexity Low_complexity 1 32 0 290 232 61 10 chr2 82098413 82098512 -168589342 + MER5C DNA MER1_type 1 104 -220 760 52 79 0 chr2 82098512 82098801 -168589053 + (TA)n Simple_repeat Simple_repeat 1 313 0 1375 85 0 10 chr2 82101604 82101825 -168586029 + L1PA4 LINE L1 5955 6155 0 34 0 0 0 chr2 82101825 82101859 -168585995 + AT_rich Low_complexity Low_complexity 1 34 0 26 64 0 0 chr2 82102066 82102113 -168585741 + AT_rich Low_complexity Low_complexity 1 47 0 25 0 0 0 chr2 82102734 82102759 -168585095 + AT_rich Low_complexity Low_complexity 1 25 0 497 310 56 92 chr2 82102765 82103049 -168584805 - L2 LINE L2 0 3272 2999 786 244 45 115 chr2 82104290 82104444 -168583410 + MSTC LTR MaLR 6 169 -259 729 191 39 0 chr2 82104444 82104622 -168583232 + L1MA8 LINE L1 6103 6287 -4 786 244 45 115 chr2 82104622 82104928 -168582926 + MSTC LTR MaLR 169 428 0 318 335 61 0 chr2 82105309 82105506 -168582348 + L1ME LINE L1 5536 5744 -377 206 425 89 11 chr2 82106409 82106691 -168581163 + L3 LINE CR1 1261 1564 -13 1321 180 113 3 chr2 82106847 82107191 -168580663 - MER3 DNA MER1_type 0 2624 2243 544 228 0 0 chr2 82107207 82107321 -168580533 - MER3 DNA MER1_type -42 167 54 315 276 125 47 chr2 82107676 82107832 -168580022 - MIR SINE MIR -66 196 15 381 377 124 36 chr2 82108638 82109113 -168578741 + L2 LINE L2 2524 3040 -273 297 0 0 0 chr2 82109244 82109277 -168578577 + (TA)n Simple_repeat Simple_repeat 1 33 0 625 205 87 10 chr2 82109381 82109576 -168578278 - MER63B DNA MER1_type -1 433 224 667 263 0 0 chr2 82109576 82109728 -168578126 - MER58B DNA MER1_type 0 341 190 907 260 5 5 chr2 82109776 82109999 -168577855 - MER63B DNA MER1_type -210 226 4 1490 192 127 38 chr2 82110032 82110471 -168577383 - MER31A LTR ERV1 -14 459 14 221 195 0 0 chr2 82110768 82110809 -168577045 - L2 LINE L2 -8 3305 3265 556 278 66 72 chr2 82110851 82111293 -168576561 - L2 LINE L2 -180 3133 2690 331 175 135 24 chr2 82111311 82111437 -168576417 + L1MC5 LINE L1 7790 7929 -32 485 310 43 16 chr2 82111471 82111658 -168576196 - L2 LINE L2 -633 2681 2490 591 293 100 63 chr2 82112376 82113059 -168574795 + L1MEd LINE L1 62 769 -5350 22 35 0 0 chr2 82113114 82113143 -168574711 + AT_rich Low_complexity Low_complexity 1 29 0 239 269 65 28 chr2 82113278 82113386 -168574468 + L1MEd LINE L1 1129 1240 -4879 28 29 0 0 chr2 82113735 82113770 -168574084 + AT_rich Low_complexity Low_complexity 1 35 0 1038 292 67 45 chr2 82114440 82114874 -168572980 - L2 LINE L2 -105 3208 2715 2368 181 40 2 chr2 82114874 82115322 -168572532 + MLT1C LTR MaLR 3 467 0 1038 292 67 45 chr2 82115322 82115596 -168572258 - L2 LINE L2 -598 2715 2448 229 146 0 36 chr2 82116634 82116689 -168571165 + (TCCC)n Simple_repeat Simple_repeat 2 54 0 993 163 0 0 chr2 82116691 82116869 -168570985 + CT-rich Low_complexity Low_complexity 1 178 0 279 167 0 48 chr2 82116869 82116953 -168570901 + T-rich Low_complexity Low_complexity 4 83 0 1918 122 0 0 chr2 82116959 82117214 -168570640 - AluSx SINE Alu -54 258 4 217 176 0 88 chr2 82118207 82118224 -168569630 + A-rich Low_complexity Low_complexity 5 22 -44 1911 170 0 3 chr2 82118224 82118535 -168569319 + AluJb SINE Alu 3 312 0 217 176 0 88 chr2 82118535 82118585 -168569269 + A-rich Low_complexity Low_complexity 22 66 0 277 274 11 32 chr2 82118646 82118741 -168569113 - MIR SINE MIR -62 200 108 321 278 74 28 chr2 82118848 82118956 -168568898 + MIR3 SINE MIR 50 162 -46 23 0 0 0 chr2 82118964 82118987 -168568867 + AT_rich Low_complexity Low_complexity 1 23 0 441 263 60 0 chr2 82119915 82120048 -168567806 - MIR SINE MIR 0 262 122 702 347 84 16 chr2 82120149 82120590 -168567264 - LTR33 LTR ERVL -45 476 6 2413 105 20 6 chr2 82120642 82120986 -168566868 + THE1B LTR MaLR 1 349 -15 26 50 0 0 chr2 82120986 82121026 -168566828 + AT_rich Low_complexity Low_complexity 1 40 0 2789 22 0 0 chr2 82121674 82121989 -168565865 - AluYb8 SINE Alu -3 315 1 189 268 0 0 chr2 82122126 82122167 -168565687 + MIR SINE MIR 209 249 -13 24 0 0 0 chr2 82122834 82122858 -168564996 + AT_rich Low_complexity Low_complexity 1 24 0 28 29 0 0 chr2 82123994 82124029 -168563825 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 82124130 82124151 -168563703 + AT_rich Low_complexity Low_complexity 1 21 0 227 318 54 70 chr2 82124720 82124849 -168563005 + L3 LINE CR1 1327 1453 -124 197 412 0 0 chr2 82125248 82125345 -168562509 + L3b LINE CR1 1104 1200 -383 370 281 0 88 chr2 82125893 82125968 -168561886 + Charlie8 DNA MER1_type 84 137 -193 2310 61 0 42 chr2 82125968 82126278 -168561576 + AluY SINE Alu 1 297 -14 370 281 0 88 chr2 82126278 82126373 -168561481 + Charlie8 DNA MER1_type 137 239 -91 2106 100 14 0 chr2 82126716 82127007 -168560847 + AluSg SINE Alu 1 295 -15 495 332 50 56 chr2 82127124 82127446 -168560408 - L2 LINE L2 -3 3310 2991 302 270 45 9 chr2 82127634 82127745 -168560109 + L1ME3 LINE L1 6048 6162 0 283 359 41 14 chr2 82127850 82127995 -168559859 - MIR SINE MIR -18 244 96 409 214 38 31 chr2 82128012 82128171 -168559683 + Charlie1 DNA MER1_type 2493 2652 -109 1530 231 68 15 chr2 82128366 82128825 -168559029 - Charlie1b DNA MER1_type -4 519 37 243 0 0 0 chr2 82129185 82129212 -168558642 + (TA)n Simple_repeat Simple_repeat 2 28 0 2438 170 0 41 chr2 82130226 82130690 -168557164 - MER65A LTR ERV1 0 445 1 2289 76 7 7 chr2 82131199 82131500 -168556354 + AluSx SINE Alu 3 303 -9 382 288 60 38 chr2 82131720 82131904 -168555950 + MIR SINE MIR 8 195 -67 24 77 0 0 chr2 82131905 82131957 -168555897 + AT_rich Low_complexity Low_complexity 1 52 0 226 169 42 14 chr2 82131957 82132028 -168555826 + (TTATA)n Simple_repeat Simple_repeat 1 73 0 733 290 39 21 chr2 82132219 82132729 -168555125 + Charlie7 DNA MER1_type 7 559 -2053 1355 258 64 14 chr2 82132943 82133715 -168554139 + Charlie7 DNA MER1_type 841 1706 -906 2347 240 80 40 chr2 82133733 82134628 -168553226 - L1MC4a LINE L1 -5 7803 6873 580 78 0 0 chr2 82134641 82134718 -168553136 - AluSg/x SINE Alu -17 295 219 486 256 133 17 chr2 82134772 82135006 -168552848 + Charlie7 DNA MER1_type 1713 1973 -639 26 30 0 0 chr2 82135031 82135064 -168552790 + AT_rich Low_complexity Low_complexity 1 33 0 707 176 0 0 chr2 82135067 82135192 -168552662 - FLAM_C SINE Alu -18 125 1 831 328 19 3 chr2 82135198 82135573 -168552281 + Charlie7 DNA MER1_type 1976 2356 -256 500 298 53 19 chr2 82137427 82137635 -168550219 + MIR SINE MIR 30 244 -18 223 146 67 22 chr2 82139255 82139344 -168548510 + (TA)n Simple_repeat Simple_repeat 1 93 0 1158 222 0 5 chr2 82139356 82139577 -168548277 + AluJo SINE Alu 3 222 -90 36 70 0 0 chr2 82139629 82139700 -168548154 + AT_rich Low_complexity Low_complexity 1 71 0 215 280 19 0 chr2 82139894 82140001 -168547853 + (TA)n Simple_repeat Simple_repeat 2 110 0 261 0 0 0 chr2 82140001 82140030 -168547824 + (CA)n Simple_repeat Simple_repeat 1 29 0 362 346 179 26 chr2 82140369 82140988 -168546866 + L2 LINE L2 2242 2955 -359 350 353 36 7 chr2 82141085 82141224 -168546630 + L2 LINE L2 3164 3306 -7 2400 43 0 27 chr2 82142102 82142402 -168545452 + AluY SINE Alu 3 294 -17 3322 137 33 2 chr2 82142585 82143131 -168544723 - L1PA16 LINE L1 -2 6164 5602 1242 107 34 30 chr2 82143147 82143380 -168544474 - L1PA4 LINE L1 -3 6152 5919 375 234 47 8 chr2 82143874 82144002 -168543852 - L2 LINE L2 -780 2534 2402 294 183 0 0 chr2 82144135 82144206 -168543648 + (CA)n Simple_repeat Simple_repeat 1 71 0 22 35 0 0 chr2 82144677 82144706 -168543148 + AT_rich Low_complexity Low_complexity 1 29 0 191 167 0 21 chr2 82146097 82146145 -168541709 + CT-rich Low_complexity Low_complexity 2 48 0 11851 30 6 0 chr2 82146317 82148122 -168539732 - L1P2 LINE L1 -379 5776 3966 612 115 0 0 chr2 82148117 82148204 -168539650 - L1P4 LINE L1 -546 5620 5534 * 359 333 107 65 chr2 82148542 82149150 -168538704 - L2 LINE L2 -3 3310 2678 1929 138 0 0 chr2 82149484 82149804 -168538050 + AluSg SINE Alu 1 320 0 1261 73 0 0 chr2 82149925 82150090 -168537764 - L1PA3 LINE L1 -1284 4862 4698 * 6554 24 6 0 chr2 82150079 82151245 -168536609 + L1PA3 LINE L1 4850 6019 -136 33 0 0 0 chr2 82152154 82152187 -168535667 + AT_rich Low_complexity Low_complexity 1 33 0 313 350 35 10 chr2 82154160 82154357 -168533497 + L1ME LINE L1 28 229 -5841 997 289 38 23 chr2 82154600 82155123 -168532731 + L1ME LINE L1 524 1054 -5016 2053 253 113 19 chr2 82155405 82156481 -168531373 - L1MEc LINE L1 -2325 3890 2714 437 188 109 0 chr2 82156597 82156698 -168531156 - MER2 DNA MER2_type -135 210 99 559 194 70 0 chr2 82156746 82156875 -168530979 + MER63 DNA MER1_type 1 138 -792 1680 132 48 10 chr2 82156901 82157211 -168530643 - L1MA5 LINE L1 -2 6298 5977 452 205 12 0 chr2 82157211 82157294 -168530560 - MER2 DNA MER2_type -249 96 13 909 293 71 11 chr2 82157319 82158039 -168529815 - L1MEc LINE L1 -3516 2699 1984 1793 238 55 91 chr2 82158047 82158698 -168529156 - MLT1E1 LTR MaLR -4 650 23 1509 231 73 9 chr2 82159027 82159465 -168528389 - MLT1C LTR MaLR -1 466 1 452 233 11 11 chr2 82160406 82160586 -168527268 + GA-rich Low_complexity Low_complexity 1 180 0 2303 123 22 6 chr2 82161914 82162272 -168525582 - THE1B LTR MaLR 0 364 1 2440 62 0 3 chr2 82162838 82163145 -168524709 + AluY SINE Alu 1 306 -5 22 35 0 0 chr2 82164173 82164202 -168523652 + AT_rich Low_complexity Low_complexity 1 29 0 1376 273 16 75 chr2 82164529 82165038 -168522816 + MLT2B1 LTR ERVL 1 479 -41 216 148 25 12 chr2 82165103 82165184 -168522670 + (TA)n Simple_repeat Simple_repeat 2 83 0 252 276 19 6 chr2 82165200 82165356 -168522498 + (TA)n Simple_repeat Simple_repeat 2 159 0 49 43 0 0 chr2 82165781 82165851 -168522003 + AT_rich Low_complexity Low_complexity 1 70 0 387 263 123 18 chr2 82166394 82166565 -168521289 - L3 LINE CR1 -181 1396 1208 23 0 0 0 chr2 82166788 82166811 -168521043 + AT_rich Low_complexity Low_complexity 1 23 0 235 311 25 25 chr2 82167198 82167320 -168520534 - HAL1b LINE L1 -737 611 490 26 64 0 0 chr2 82167536 82167583 -168520271 + AT_rich Low_complexity Low_complexity 1 47 0 2008 179 61 22 chr2 82168330 82168739 -168519115 + MSTC LTR MaLR 4 428 0 1825 199 108 72 chr2 82169435 82170073 -168517781 + MER109 Unknown Unknown 1149 1809 -623 21 89 0 0 chr2 82170228 82170284 -168517570 + AT_rich Low_complexity Low_complexity 1 56 0 662 337 33 15 chr2 82170355 82170750 -168517104 + L1MC4 LINE L1 5435 5836 -1972 2152 217 0 3 chr2 82171112 82171504 -168516350 + MER44D DNA MER2_type 1 446 -159 1780 169 25 12 chr2 82171507 82171833 -168516021 + MER44D DNA MER2_type 220 604 -1 307 266 26 117 chr2 82172657 82172811 -168515043 - MIR3 SINE MIR -36 172 33 1408 209 47 0 chr2 82173757 82174034 -168513820 + AluJo SINE Alu 1 290 -22 450 357 47 8 chr2 82174126 82174293 -168513561 + MIR SINE MIR 5 185 -77 776 222 61 28 chr2 82174293 82174505 -168513349 + MER20 DNA MER1_type 1 219 0 450 357 47 8 chr2 82174505 82174572 -168513282 + MIR SINE MIR 185 248 -14 243 291 25 25 chr2 82175444 82175523 -168512331 + L3b LINE CR1 1282 1360 -223 300 211 10 19 chr2 82175934 82176038 -168511816 + CT-rich Low_complexity Low_complexity 3 105 0 256 275 9 46 chr2 82176148 82176257 -168511597 - L1MC4 LINE L1 -1338 6704 6600 319 296 23 0 chr2 82176307 82176395 -168511459 + L1MC4 LINE L1 6614 6703 -1339 242 253 23 0 chr2 82176396 82176483 -168511371 + L1MC4 LINE L1 6615 6703 -1339 583 200 23 6 chr2 82176484 82176659 -168511195 + (TA)n Simple_repeat Simple_repeat 1 178 0 218 219 62 0 chr2 82176659 82176723 -168511131 + (TATATG)n Simple_repeat Simple_repeat 2 69 0 1010 312 137 4 chr2 82177428 82177967 -168509887 + L2 LINE L2 1725 2335 -979 508 316 88 5 chr2 82177984 82178177 -168509677 - MLT1K LTR MaLR -58 530 322 439 271 60 15 chr2 82178398 82178531 -168509323 + MIR SINE MIR 39 177 -85 687 164 0 8 chr2 82178531 82178653 -168509201 - AluJb SINE Alu -11 301 181 383 370 52 39 chr2 82178755 82179085 -168508769 + L2 LINE L2 2324 2657 -657 534 374 22 0 chr2 82179152 82179331 -168508523 + L2 LINE L2 2869 3051 -262 239 195 24 61 chr2 82179483 82179565 -168508289 + (CATA)n Simple_repeat Simple_repeat 2 80 0 195 303 26 71 chr2 82179576 82179731 -168508123 + L2 LINE L2 3162 3309 -4 2116 120 0 13 chr2 82179787 82180087 -168507767 + AluSc SINE Alu 1 296 -13 228 100 0 0 chr2 82180147 82180187 -168507667 + (CA)n Simple_repeat Simple_repeat 2 41 0 351 253 69 90 chr2 82180481 82180726 -168507128 + L1M4 LINE L1 2738 2977 -3169 26057 140 13 9 chr2 82180786 82182012 -168505842 + L1PA8A LINE L1 1 1220 -5226 189 74 0 0 chr2 82182012 82182039 -168505815 + (CAA)n Simple_repeat Simple_repeat 1 27 0 26057 140 13 9 chr2 82182039 82187163 -168500691 + L1PA8A LINE L1 1220 6443 -3 219 269 0 29 chr2 82187180 82187284 -168500570 + A-rich Low_complexity Low_complexity 4 104 0 366 74 0 0 chr2 82187473 82187527 -168500327 + (TG)n Simple_repeat Simple_repeat 2 55 0 3014 143 21 14 chr2 82187569 82188134 -168499720 - L1MA8 LINE L1 -15 6276 5708 492 258 18 12 chr2 82188392 82188559 -168499295 - L1MEc LINE L1 -3960 2436 2269 597 219 80 7 chr2 82188614 82188751 -168499103 + MER58B DNA MER1_type 195 341 0 4245 278 62 42 chr2 82188752 82189611 -168498243 - L1MEc LINE L1 -4131 2265 1425 2391 74 0 37 chr2 82189611 82189934 -168497920 + AluY SINE Alu 1 311 0 462 18 0 0 chr2 82189939 82189994 -168497860 + (TA)n Simple_repeat Simple_repeat 2 56 0 4245 278 62 42 chr2 82189994 82191136 -168496718 - L1MEc LINE L1 -4974 1422 305 639 71 0 0 chr2 82191136 82191221 -168496633 + (CTATT)n Simple_repeat Simple_repeat 4 88 0 4245 278 62 42 chr2 82191221 82191235 -168496619 - L1MEc LINE L1 -6091 305 293 2303 82 0 3 chr2 82191235 82191528 -168496326 - AluY SINE Alu -19 292 1 4245 278 62 42 chr2 82191528 82191679 -168496175 - L1MEc LINE L1 -6103 293 47 255 282 10 19 chr2 82191940 82192043 -168495811 - L1ME LINE L1 -5905 165 64 11171 227 31 56 chr2 82192118 82195998 -168491856 + L1P4 LINE L1 1783 5562 -604 445 275 37 57 chr2 82195993 82196237 -168491617 - L1MDa LINE L1 -4553 1987 1749 * 558 301 68 71 chr2 82196230 82196655 -168491199 - L1MDa LINE L1 -5633 897 474 26 74 0 0 chr2 82196936 82196990 -168490864 + AT_rich Low_complexity Low_complexity 1 54 0 22 70 0 0 chr2 82197049 82197092 -168490762 + AT_rich Low_complexity Low_complexity 1 43 0 40 37 0 0 chr2 82197600 82197654 -168490200 + AT_rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr2 82198145 82198184 -168489670 + AT_rich Low_complexity Low_complexity 1 39 0 836 254 76 25 chr2 82198391 82198666 -168489188 - MLT2B1 LTR ERVL -3 517 229 2024 145 9 12 chr2 82198681 82199025 -168488829 - MER61A LTR ERV1 0 343 1 20538 105 26 23 chr2 82199025 82199078 -168488776 - MER61A-int LTR ERV1 0 6066 6015 2224 51 0 67 chr2 82199078 82199394 -168488460 + AluY SINE Alu 1 295 -16 20538 105 26 23 chr2 82199394 82202941 -168484913 - MER61A-int LTR ERV1 -51 6015 1501 1889 72 0 0 chr2 82202941 82203176 -168484678 - AluY SINE Alu -21 290 56 20538 105 26 23 chr2 82203176 82203273 -168484581 - MER61A-int LTR ERV1 -4565 1501 1406 2100 193 76 60 chr2 82203289 82203974 -168483880 - MER61A-int LTR ERV1 -4440 777 1 2027 127 14 26 chr2 82203974 82204321 -168483533 - MER61A LTR ERV1 0 343 1 984 193 4 70 chr2 82204321 82204564 -168483290 - MLT2B1 LTR ERVL -291 229 3 1829 134 86 0 chr2 82204827 82205096 -168482758 + AluSg SINE Alu 1 292 -18 1493 208 58 17 chr2 82205113 82205459 -168482395 - MLT1A1 LTR MaLR 0 365 6 268 254 16 0 chr2 82205964 82206027 -168481827 + (TATATG)n Simple_repeat Simple_repeat 4 67 0 4430 144 52 5 chr2 82206028 82206822 -168481032 + Tigger3b DNA MER2_type 3 833 -398 2095 128 40 27 chr2 82206839 82207215 -168480639 - Tigger3(Golem) DNA MER2_type -173 2856 2476 5378 236 29 50 chr2 82207215 82209634 -168478220 + L1PB3 LINE L1 148 1644 -5219 561 188 27 0 chr2 82209645 82209757 -168478097 - L1PBb LINE L1 -5284 920 806 5288 180 60 12 chr2 82209757 82211866 -168475988 + L1PB3 LINE L1 4642 6865 -5 1174 217 4 25 chr2 82212044 82212403 -168475451 + L1MB7 LINE L1 5675 6011 -163 252 213 0 0 chr2 82213710 82213771 -168474083 + GA-rich Low_complexity Low_complexity 3 63 0 2139 123 0 7 chr2 82214965 82215258 -168472596 + AluSx SINE Alu 3 293 -19 207 0 0 0 chr2 82215276 82215299 -168472555 + (CA)n Simple_repeat Simple_repeat 2 24 0 5574 126 5 15 chr2 82215417 82216353 -168471501 + L1P LINE L1 2873 3799 -2347 2015 99 0 20 chr2 82216353 82216646 -168471208 + L1PA8A LINE L1 5844 6131 0 813 185 77 20 chr2 82216960 82217155 -168470699 - MER6B DNA MER2_type -3 207 2 1742 161 16 0 chr2 82217263 82217567 -168470287 + AluJb SINE Alu 1 309 -3 660 322 23 9 chr2 82217816 82218030 -168469824 + MIR SINE MIR 11 227 -35 2453 265 122 55 chr2 82218147 82218623 -168469231 + L1M4 LINE L1 2906 3349 -2797 2043 127 68 11 chr2 82218623 82218978 -168468876 - THE1C LTR MaLR 0 375 1 2453 265 122 55 chr2 82218978 82220289 -168467565 + L1M4 LINE L1 3349 4813 -1333 285 188 52 10 chr2 82220609 82220705 -168467149 + (TA)n Simple_repeat Simple_repeat 1 100 0 313 330 125 39 chr2 82220750 82221086 -168466768 - L1M4 LINE L1 -2201 3945 3581 1188 226 76 11 chr2 82221598 82221753 -168466101 - AluJo SINE Alu -9 293 150 201 39 0 0 chr2 82221753 82221779 -168466075 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1188 226 76 11 chr2 82221779 82221898 -168465956 - AluJo SINE Alu -152 150 1 6763 35 0 1 chr2 82222060 82222901 -168464953 - L1PA4 LINE L1 0 6155 5341 21 36 0 0 chr2 82223025 82223053 -168464801 + AT_rich Low_complexity Low_complexity 1 28 0 248 248 159 21 chr2 82223074 82223219 -168464635 + MER104 DNA Tc2 14 178 -2 1189 259 121 13 chr2 82223270 82223725 -168464129 - MLT1D LTR MaLR 0 505 2 2360 139 20 2 chr2 82224085 82224494 -168463360 - L1MA5A LINE L1 -2 6295 5880 2542 52 0 3 chr2 82224513 82224820 -168463034 - AluY SINE Alu -5 306 1 180 97 0 0 chr2 82225111 82225142 -168462712 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 2126 110 0 0 chr2 82225148 82225430 -168462424 - AluSc SINE Alu -26 283 2 1898 184 102 13 chr2 82225661 82226052 -168461802 + MSTB LTR MaLR 1 426 0 644 311 30 38 chr2 82226093 82226459 -168461395 + MER90 LTR ERV1 188 550 -64 329 327 68 34 chr2 82226546 82226812 -168461042 + L1ME4a LINE L1 5513 5787 -334 275 242 23 61 chr2 82226882 82227014 -168460840 + L1ME4a LINE L1 5883 6009 -112 1038 162 49 0 chr2 82227290 82227475 -168460379 - AluSg/x SINE Alu 0 310 117 8783 29 5 0 chr2 82228112 82229938 -168457916 + L1PA3 LINE L1 4326 6155 0 1614 174 125 28 chr2 82229987 82230348 -168457506 + MSTD LTR MaLR 1 396 0 24 0 0 0 chr2 82231082 82231106 -168456748 + AT_rich Low_complexity Low_complexity 1 24 0 372 369 51 6 chr2 82231296 82231453 -168456401 + MIR3 SINE MIR 16 179 -29 257 322 171 7 chr2 82232333 82232479 -168455375 + MIR SINE MIR 49 218 -44 489 306 208 5 chr2 82232709 82232925 -168454929 - MIR SINE MIR 0 262 3 1889 209 0 14 chr2 82233434 82233798 -168454056 - MLT1A1 LTR MaLR -6 359 1 1461 206 92 24 chr2 82234050 82234385 -168453469 + MLT1A2 LTR MaLR 1 358 -16 1131 243 93 40 chr2 82235523 82236633 -168451221 + L1ME2 LINE L1 4538 5587 -747 2094 128 0 0 chr2 82236633 82236922 -168450932 + AluSg SINE Alu 2 290 -20 732 23 0 0 chr2 82236922 82237008 -168450846 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 1131 243 93 40 chr2 82237008 82237255 -168450599 + L1ME2 LINE L1 5586 6333 -1 967 245 44 50 chr2 82237786 82238129 -168449725 + MLT2C1 LTR ERVL 1 341 -56 228 148 0 19 chr2 82238133 82238187 -168449667 + L1MCa LINE L1 2015 2067 -4359 * 256 210 32 0 chr2 82238180 82238242 -168449612 - L1MC4 LINE L1 -1340 6702 6639 336 83 0 0 chr2 82238247 82238295 -168449559 + (CA)n Simple_repeat Simple_repeat 2 49 0 1948 161 25 9 chr2 82238295 82238619 -168449235 - MER2 DNA MER2_type -3 342 14 342 246 108 67 chr2 82238698 82238893 -168448961 - HAL1 LINE L1 -326 2181 1979 464 160 3 26 chr2 82238901 82239003 -168448851 + LTR24B LTR ERV1 1 97 -368 544 239 46 52 chr2 82239098 82239405 -168448449 + LTR24B LTR ERV1 161 569 0 869 302 88 30 chr2 82239435 82239972 -168447882 - HAL1 LINE L1 -550 1957 1390 321 254 90 70 chr2 82240086 82240287 -168447567 + L1M4 LINE L1 5106 5310 -836 22 0 0 0 chr2 82240290 82240312 -168447542 + AT_rich Low_complexity Low_complexity 1 22 0 933 224 10 29 chr2 82242076 82242281 -168445573 + MER58A DNA MER1_type 24 224 0 217 289 174 16 chr2 82243762 82243883 -168443971 - L2 LINE L2 -6 3307 3168 1292 276 111 15 chr2 82244732 82245044 -168442810 - MLT1D LTR MaLR 0 505 133 536 0 16 0 chr2 82245044 82245108 -168442746 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 1292 276 111 15 chr2 82245108 82245256 -168442598 - MLT1D LTR MaLR -372 133 1 231 176 21 0 chr2 82245295 82245347 -168442507 - MLT2B3 LTR ERVL -2 552 390 329 169 12 0 chr2 82245360 82245443 -168442411 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 1567 238 98 42 chr2 82245443 82245893 -168441961 - MLT2B1 LTR ERVL -42 478 4 351 167 46 35 chr2 82246956 82247130 -168440724 + (TA)n Simple_repeat Simple_repeat 1 176 0 227 95 57 38 chr2 82247211 82247316 -168440538 + (TA)n Simple_repeat Simple_repeat 1 107 0 1450 232 49 43 chr2 82248064 82248552 -168439302 + L1M4 LINE L1 3479 3969 -2177 597 316 0 0 chr2 82248597 82248755 -168439099 + MER45A DNA AcHobo 1 158 -20 21160 46 0 0 chr2 82248788 82252194 -168435660 - L1PA5 LINE L1 0 6154 2752 2336 245 97 57 chr2 82252201 82252307 -168435547 + L1M4 LINE L1 4066 4166 -1980 240 35 0 0 chr2 82252307 82252336 -168435518 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2336 245 97 57 chr2 82252336 82252622 -168435232 + L1M4 LINE L1 4166 4439 -1707 2189 109 0 13 chr2 82252622 82252926 -168434928 + AluSc SINE Alu 1 300 -9 2336 245 97 57 chr2 82252926 82253138 -168434716 + L1M4 LINE L1 4439 4641 -1505 1048 215 84 32 chr2 82253138 82253422 -168434432 - AluJo SINE Alu -3 299 1 2336 245 97 57 chr2 82253422 82254056 -168433798 + L1M4 LINE L1 4641 5355 -791 479 195 55 1 chr2 82254050 82254114 -168433740 + L1ME3 LINE L1 6036 6095 -239 * 2939 175 14 9 chr2 82254114 82254680 -168433174 + L1MA4A LINE L1 5730 6298 -5 479 195 55 1 chr2 82254680 82254744 -168433110 + L1ME3 LINE L1 6095 6332 -2 2021 36 0 0 chr2 82254842 82255089 -168432765 - L1P LINE L1 -3100 3046 2800 1949 142 23 0 chr2 82255111 82255413 -168432441 - AluSx SINE Alu -3 309 1 234 301 80 18 chr2 82255864 82255977 -168431877 - LTR67 LTR ERVL -7 550 431 1350 145 35 9 chr2 82256024 82256252 -168431602 - AluSg/x SINE Alu -3 307 74 210 150 0 0 chr2 82256517 82256557 -168431297 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 1375 306 129 40 chr2 82256893 82257783 -168430071 + L2 LINE L2 917 1885 -1429 612 313 17 33 chr2 82257786 82258026 -168429828 + MER69 DNA AcHobo 1 236 -990 2228 243 114 27 chr2 82258044 82259012 -168428842 + MER69 DNA AcHobo 1458 2509 -17 1176 300 39 81 chr2 82259014 82259086 -168428768 + L2 LINE L2 1888 1961 -1353 1837 149 43 25 chr2 82259086 82259454 -168428400 + THE1C LTR MaLR 1 375 0 1176 300 39 81 chr2 82259454 82260077 -168427777 + L2 LINE L2 1961 2554 -760 1579 189 50 88 chr2 82260409 82260934 -168426920 + MLT1D LTR MaLR 1 505 0 220 263 0 62 chr2 82261474 82261554 -168426300 - MIR SINE MIR -56 206 132 195 329 29 0 chr2 82262180 82262250 -168425604 - MIR SINE MIR -6 256 185 553 223 145 6 chr2 82262479 82262645 -168425209 + MER5A DNA MER1_type 1 189 0 1168 258 36 38 chr2 82263185 82263701 -168424153 + MLT1E LTR MaLR 42 593 0 906 244 6 0 chr2 82264698 82264874 -168422980 + MER5A DNA MER1_type 8 184 -5 298 319 47 65 chr2 82264725 82264894 -168422960 - MER5A DNA MER1_type -23 166 1 * 3018 138 32 59 chr2 82267238 82267827 -168420027 - MER4D LTR ERV1 -10 893 321 210 143 0 0 chr2 82267827 82267862 -168419992 + (TG)n Simple_repeat Simple_repeat 2 36 0 354 221 0 63 chr2 82267864 82267959 -168419895 - L1MC4 LINE L1 -1339 6703 6615 1396 148 122 8 chr2 82268045 82268308 -168419546 - MER4D LTR ERV1 -579 293 1 405 143 121 57 chr2 82268739 82268879 -168418975 + LTR19A LTR ERV1 327 475 -11 4031 143 42 12 chr2 82268968 82269658 -168418196 - MER50 LTR ERV1 -23 711 1 488 297 114 31 chr2 82270888 82271348 -168416506 - L1 LINE L1 -3540 2606 2112 367 339 69 64 chr2 82271701 82271890 -168415964 - HAL1 LINE L1 -854 1653 1466 2188 102 3 0 chr2 82271890 82272201 -168415653 - AluSq SINE Alu 0 312 1 367 339 69 64 chr2 82272201 82272417 -168415437 - HAL1 LINE L1 -1041 1466 1245 22 35 0 0 chr2 82272440 82272469 -168415385 + AT_rich Low_complexity Low_complexity 1 29 0 387 302 14 0 chr2 82272914 82273053 -168414801 - L1ME LINE L1 -552 5614 5474 2970 248 73 23 chr2 82273123 82273609 -168414245 - L1ME LINE L1 -758 5388 4928 452 184 51 0 chr2 82273609 82273707 -168414147 - L1PA16 LINE L1 0 6166 6064 2970 248 73 23 chr2 82273707 82274615 -168413239 - L1ME LINE L1 -1218 4928 4018 194 71 0 0 chr2 82274968 82274996 -168412858 - MIR SINE MIR -110 152 125 352 43 0 0 chr2 82275346 82275393 -168412461 + MADE1 DNA Mariner 34 80 0 189 0 0 0 chr2 82277443 82277464 -168410390 + (TG)n Simple_repeat Simple_repeat 2 22 0 22 0 0 0 chr2 82277849 82277871 -168409983 + AT_rich Low_complexity Low_complexity 1 22 0 7344 38 5 0 chr2 82278322 82279211 -168408643 + L1PA5 LINE L1 5254 6146 -8 38 22 0 0 chr2 82279214 82279259 -168408595 + AT_rich Low_complexity Low_complexity 1 45 0 2224 118 0 0 chr2 82279259 82279555 -168408299 + AluSx SINE Alu 1 296 -16 1799 95 8 0 chr2 82279571 82279823 -168408031 + L1PA11 LINE L1 5912 6165 -9 233 160 0 60 chr2 82280284 82280328 -168407526 - MIR SINE MIR -106 156 115 1955 100 0 0 chr2 82280328 82280578 -168407276 - AluSq SINE Alu -63 250 1 522 240 26 19 chr2 82280594 82280748 -168407106 - L1MC5 LINE L1 -1160 6801 6647 229 194 0 90 chr2 82280883 82280950 -168406904 - L1MC4a LINE L1 -1454 6354 6294 721 264 177 60 chr2 82281090 82281294 -168406560 - L1MC4a LINE L1 -1921 5887 5708 1615 140 4 0 chr2 82281294 82281529 -168406325 - AluSx SINE Alu -40 272 37 721 264 177 60 chr2 82281529 82281888 -168405966 - L1MC4a LINE L1 -2100 5708 5258 1550 262 22 46 chr2 82282389 82282972 -168404882 + L1MC4a LINE L1 7200 7768 -40 1282 56 0 0 chr2 82283225 82283386 -168404468 + L1PA11 LINE L1 6014 6174 0 1414 141 39 69 chr2 82283436 82283831 -168404023 - MER67D LTR ERV1 -242 272 1 369 43 0 0 chr2 82283844 82283891 -168403963 + (CA)n Simple_repeat Simple_repeat 2 48 0 880 233 6 0 chr2 82283910 82284082 -168403772 - MER45A DNA AcHobo 0 178 6 498 279 39 69 chr2 82284083 82284316 -168403538 + MIR SINE MIR 37 262 0 1942 93 68 35 chr2 82284442 82284819 -168403035 + LTR7 LTR ERV1 1 450 0 13105 153 21 45 chr2 82284819 82287550 -168400304 + HERVH LTR ERV1 1 2987 -4726 2639 163 13 2 chr2 82287546 82288001 -168399853 + HERVH LTR ERV1 3142 3601 -4112 * 7060 135 9 6 chr2 82287988 82289233 -168398621 + HERVH LTR ERV1 3809 5020 -2287 1675 113 0 0 chr2 82289237 82289485 -168398369 + HERVH LTR ERV1 7283 7530 -183 1880 191 67 36 chr2 82289502 82289947 -168397907 + LTR2B LTR ERV1 32 490 0 1136 111 16 21 chr2 82289947 82290137 -168397717 + HERVH LTR ERV1 7525 7713 0 2044 97 222 5 chr2 82290137 82290507 -168397347 + LTR7 LTR ERV1 1 450 0 1599 63 0 0 chr2 82290637 82290827 -168397027 + AluY SINE Alu 103 292 -19 227 281 0 0 chr2 82291137 82291201 -168396653 - MLT1I LTR MaLR -10 399 336 324 0 0 0 chr2 82292063 82292099 -168395755 + (TG)n Simple_repeat Simple_repeat 1 36 0 2275 157 117 51 chr2 82293888 82294388 -168393466 + MER34C LTR ERV1 1 541 -44 1115 211 107 79 chr2 82294388 82294676 -168393178 + MER31A LTR ERV1 1 308 -177 1925 134 10 13 chr2 82294676 82294975 -168392879 - AluSx SINE Alu -14 298 1 1115 211 107 79 chr2 82294975 82295154 -168392700 + MER31A LTR ERV1 308 481 -4 2275 157 117 51 chr2 82295154 82295200 -168392654 + MER34C LTR ERV1 541 583 -2 2431 188 61 94 chr2 82295851 82296603 -168391251 + LTR8A LTR ERV1 1 727 0 1395 195 72 79 chr2 82296605 82297142 -168390712 - MER67C LTR ERV1 -4 510 1 378 289 60 22 chr2 82297259 82297443 -168390411 + L1MC4a LINE L1 5682 5810 -524 813 275 183 30 chr2 82297445 82298204 -168389650 + L2 LINE L2 2432 3313 0 546 233 0 33 chr2 82298544 82298664 -168389190 + FLAM_C SINE Alu 1 116 -27 25 51 0 0 chr2 82298664 82298703 -168389151 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 82298918 82298956 -168388898 + AT_rich Low_complexity Low_complexity 1 38 0 24 67 0 0 chr2 82299267 82299312 -168388542 + AT_rich Low_complexity Low_complexity 1 45 0 2664 99 6 3 chr2 82299830 82300193 -168387661 + THE1B LTR MaLR 1 364 0 538 271 30 74 chr2 82300740 82300943 -168386911 + MIR SINE MIR 3 196 -66 189 309 162 15 chr2 82301134 82301202 -168386652 + MIR3 SINE MIR 89 166 -42 28 0 0 0 chr2 82302123 82302151 -168385703 + AT_rich Low_complexity Low_complexity 1 28 0 2316 165 45 69 chr2 82302611 82303149 -168384705 - LTR26B LTR ERV1 0 531 7 333 267 59 0 chr2 82303447 82303548 -168384306 + L2 LINE L2 3153 3259 -13 398 183 43 43 chr2 82303795 82303888 -168383966 - L2 LINE L2 -2 3311 3219 390 323 97 9 chr2 82303918 82304135 -168383719 - MIR SINE MIR -4 258 23 475 317 125 56 chr2 82304170 82304650 -168383204 + L2 LINE L2 2216 2728 -586 1367 193 63 42 chr2 82305054 82305645 -168382209 + pTR5 LTR ERV1 743 1345 -1093 3990 148 114 30 chr2 82305660 82306417 -168381437 + LTR12 LTR ERV1 5 824 -2 484 324 35 0 chr2 82307276 82307449 -168380405 + MER20B DNA MER1_type 1 179 -604 271 331 162 7 chr2 82307563 82307699 -168380155 + MER91A DNA MER1_type 28 184 -12 556 229 12 24 chr2 82307717 82307883 -168379971 + MER20B DNA MER1_type 285 448 -335 196 364 61 30 chr2 82308723 82308855 -168378999 - L2 LINE L2 -222 3050 2915 2218 69 17 0 chr2 82309291 82309582 -168378272 + AluY SINE Alu 1 296 -15 188 349 143 15 chr2 82309713 82309842 -168378012 + MIR SINE MIR 38 180 -48 203 189 0 0 chr2 82311264 82311301 -168376553 + A-rich Low_complexity Low_complexity 1 37 0 1108 221 139 7 chr2 82311325 82311628 -168376226 - MER2 DNA MER2_type 0 344 2 21 0 0 0 chr2 82311648 82311669 -168376185 + AT_rich Low_complexity Low_complexity 1 21 0 330 297 121 33 chr2 82311939 82312245 -168375609 - L1ME4a LINE L1 -155 5966 5634 399 326 75 11 chr2 82312250 82312621 -168375233 - L1ME4a LINE L1 -1362 4784 4390 404 293 34 29 chr2 82312705 82312913 -168374941 - L1ME4a LINE L1 -1923 4223 4015 297 197 14 14 chr2 82313037 82313108 -168374746 + MLT2B3 LTR ERVL 1 71 -483 2026 191 38 79 chr2 82313223 82313727 -168374127 + MLT2B3 LTR ERVL 72 554 0 339 349 75 18 chr2 82313733 82314065 -168373789 - L1M4 LINE L1 -1368 4778 4428 2036 129 45 28 chr2 82314157 82314514 -168373340 - THE1B LTR MaLR -1 363 1 2114 96 43 0 chr2 82314675 82314957 -168372897 - AluSc SINE Alu -15 294 1 50 59 0 0 chr2 82315145 82315230 -168372624 + AT_rich Low_complexity Low_complexity 1 85 0 211 153 51 17 chr2 82315271 82315330 -168372524 + (TA)n Simple_repeat Simple_repeat 2 62 0 1548 221 75 51 chr2 82315433 82315926 -168371928 + MLT1D LTR MaLR 1 505 0 382 238 33 94 chr2 82315961 82316142 -168371712 - MER104 DNA Tc2 -2 178 9 3212 198 48 52 chr2 82318030 82318818 -168369036 - LTR1 LTR ERV1 0 785 1 13879 148 32 7 chr2 82318818 82321067 -168366787 - HUERS-P2 LTR ERV1 0 3088 783 1257 159 97 19 chr2 82321125 82321383 -168366471 - HUERS-P2 LTR ERV1 -2589 499 222 652 183 23 30 chr2 82321429 82321560 -168366294 - HUERS-P2 LTR ERV1 -2957 131 2 3417 181 70 45 chr2 82321564 82322317 -168365537 - LTR1 LTR ERV1 -13 772 1 734 215 0 0 chr2 82322361 82322491 -168365363 - FLAM_C SINE Alu -3 130 1 947 191 69 0 chr2 82322582 82322770 -168365084 - MER20 DNA MER1_type -18 201 1 274 324 123 12 chr2 82323474 82323644 -168364210 + MIR SINE MIR 36 224 -38 2329 121 85 10 chr2 82323973 82324371 -168363483 - MSTA LTR MaLR 0 428 1 32 75 0 0 chr2 82324906 82324973 -168362881 + AT_rich Low_complexity Low_complexity 1 67 0 180 179 0 0 chr2 82325130 82325169 -168362685 + (CAT)n Simple_repeat Simple_repeat 2 40 0 807 273 104 66 chr2 82326030 82326619 -168361235 - MLT1G LTR MaLR 0 590 7 232 318 0 0 chr2 82326851 82326917 -168360937 + GA-rich Low_complexity Low_complexity 1 66 0 473 284 80 40 chr2 82327077 82327278 -168360576 + MIR SINE MIR 45 253 -9 4325 129 1 6 chr2 82327322 82327986 -168359868 + L1PA16 LINE L1 5497 6157 -9 715 167 0 24 chr2 82327998 82328124 -168359730 - AluJb SINE Alu -189 123 1 2296 94 7 0 chr2 82328923 82329230 -168358624 - AluSp SINE Alu -4 309 1 235 247 65 52 chr2 82329373 82329450 -168358404 - MIR SINE MIR -76 186 109 781 201 216 11 chr2 82329825 82330094 -168357760 + MER33 DNA MER1_type 1 324 0 189 237 0 0 chr2 82330144 82330182 -168357672 - MIR SINE MIR -133 129 92 339 251 168 30 chr2 82331054 82331221 -168356633 + MIR SINE MIR 2 191 -71 319 328 97 0 chr2 82331301 82331435 -168356419 + MIR SINE MIR 68 214 -48 215 348 51 17 chr2 82332786 82332904 -168354950 - L2 LINE L2 0 3313 3192 232 355 115 70 chr2 82333170 82334382 -168353472 - L2 LINE L2 -342 2972 1686 1527 175 42 18 chr2 82334382 82334667 -168353187 + AluJo SINE Alu 1 292 -20 232 355 115 70 chr2 82334667 82334874 -168352980 - L2 LINE L2 -1628 1686 1490 201 333 0 0 chr2 82335166 82335265 -168352589 + A-rich Low_complexity Low_complexity 1 99 0 40 67 0 0 chr2 82335566 82335641 -168352213 + AT_rich Low_complexity Low_complexity 1 75 0 38 101 0 0 chr2 82335879 82336008 -168351846 + AT_rich Low_complexity Low_complexity 1 129 0 444 19 0 0 chr2 82336294 82336347 -168351507 + (TG)n Simple_repeat Simple_repeat 1 53 0 619 286 139 17 chr2 82336501 82336989 -168350865 - L1ME3 LINE L1 -268 5894 5352 424 313 70 34 chr2 82337446 82337768 -168350086 + HAL1b LINE L1 452 729 -619 27 62 0 0 chr2 82337862 82337910 -168349944 + AT_rich Low_complexity Low_complexity 1 48 0 21 0 0 0 chr2 82338014 82338035 -168349819 + AT_rich Low_complexity Low_complexity 1 21 0 307 353 69 76 chr2 82338553 82339056 -168348798 + L2 LINE L2 2773 3271 -1 1952 92 6 76 chr2 82339471 82339786 -168348068 - AluSq SINE Alu -20 293 1 1126 80 0 0 chr2 82339787 82339924 -168347930 - AluSq/x SINE Alu -176 137 1 515 282 57 9 chr2 82339960 82340187 -168347667 + L1M4 LINE L1 5024 5261 -885 185 218 109 0 chr2 82340439 82340494 -168347360 - MIR SINE MIR -90 172 112 1877 130 65 0 chr2 82340924 82341216 -168346638 + AluSx SINE Alu 1 311 -1 1073 191 10 15 chr2 82341383 82341587 -168346267 + AluJo SINE Alu 57 259 -53 358 150 0 25 chr2 82341598 82341678 -168346176 + (GGGA)n Simple_repeat Simple_repeat 3 80 0 238 371 0 0 chr2 82342250 82342320 -168345534 + L2 LINE L2 2988 3057 -256 1147 213 72 54 chr2 82342349 82342796 -168345058 + MLT1C LTR MaLR 15 466 -1 511 241 156 33 chr2 82342796 82343008 -168344846 + L2 LINE L2 3053 3290 -23 2183 110 0 10 chr2 82343010 82343311 -168344543 - AluSg SINE Alu -12 298 1 273 195 32 24 chr2 82343338 82343461 -168344393 + GA-rich Low_complexity Low_complexity 3 126 0 496 160 0 0 chr2 82343948 82344042 -168343812 + L1MA4 LINE L1 6196 6289 -11 28 29 0 0 chr2 82344042 82344077 -168343777 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr2 82344576 82344618 -168343236 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr2 82345816 82345841 -168342013 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 82345869 82345890 -168341964 + AT_rich Low_complexity Low_complexity 1 21 0 734 333 84 29 chr2 82346221 82346671 -168341183 + LTR33 LTR ERVL 33 507 -14 184 388 157 0 chr2 82346777 82346898 -168340956 + L2 LINE L2 3133 3272 0 672 268 62 5 chr2 82347967 82348161 -168339693 + MER20 DNA MER1_type 14 218 -1 248 303 15 0 chr2 82348169 82348235 -168339619 + MLT1L LTR MaLR 163 229 -386 1113 45 0 0 chr2 82348285 82348419 -168339435 - AluYa5/8 SINE Alu -7 303 170 23 33 0 0 chr2 82349885 82349915 -168337939 + AT_rich Low_complexity Low_complexity 1 30 0 200 226 16 0 chr2 82350014 82350076 -168337778 + (TA)n Simple_repeat Simple_repeat 1 63 0 53 30 0 0 chr2 82350811 82350878 -168336976 + AT_rich Low_complexity Low_complexity 1 67 0 1396 210 0 48 chr2 82350885 82351195 -168336659 - AluJo SINE Alu -15 297 3 979 131 12 94 chr2 82351929 82352174 -168335680 + L1PA15 LINE L1 5941 6165 0 745 237 11 11 chr2 82352639 82352829 -168335025 + L1MD3 LINE L1 7797 7986 -9 370 324 81 45 chr2 82353131 82353378 -168334476 + L1ME LINE L1 5297 5552 -569 2459 11 0 0 chr2 82353379 82353654 -168334200 - L1PA3 LINE L1 -440 5715 5441 3551 28 2 5 chr2 82353654 82354072 -168333782 + L1PA3 LINE L1 5731 6154 -1 236 226 0 0 chr2 82354202 82354255 -168333599 + L1MC4 LINE L1 6648 6700 -1342 237 222 0 0 chr2 82354260 82354323 -168333531 + (TA)n Simple_repeat Simple_repeat 1 63 0 462 280 38 8 chr2 82354474 82354606 -168333248 - MIR SINE MIR -86 176 41 259 268 0 0 chr2 82356238 82356294 -168331560 - L2 LINE L2 0 3272 3217 2753 6 3 10 chr2 82356753 82357066 -168330788 - AluYa5 SINE Alu 0 311 1 276 294 67 33 chr2 82357125 82357412 -168330442 - L1M4 LINE L1 -587 5591 5293 777 274 60 45 chr2 82357560 82357896 -168329958 - HAL1 LINE L1 -2166 341 1 200 296 92 41 chr2 82360434 82360532 -168327322 - L2 LINE L2 -1 3271 3169 42 71 0 0 chr2 82360588 82360672 -168327182 + AT_rich Low_complexity Low_complexity 1 84 0 283 240 48 48 chr2 82360943 82361047 -168326807 + MER112 DNA MER1_type 136 239 -21 673 387 18 11 chr2 82361827 82362209 -168325645 + L2 LINE L2 2289 2673 -641 1703 279 56 42 chr2 82362278 82362845 -168325009 + MLT1G LTR MaLR 16 590 0 219 366 105 24 chr2 82362846 82363092 -168324762 + L2 LINE L2 2794 3056 -257 2020 126 17 0 chr2 82363282 82363575 -168324279 + AluSx SINE Alu 1 298 -14 192 325 195 32 chr2 82364330 82364453 -168323401 - MIR3 SINE MIR -61 147 5 186 208 0 0 chr2 82365868 82365921 -168321933 + A-rich Low_complexity Low_complexity 1 53 0 28 29 0 0 chr2 82366014 82366049 -168321805 + AT_rich Low_complexity Low_complexity 1 35 0 214 320 97 51 chr2 82366217 82366392 -168321462 + MIR SINE MIR 78 260 -2 390 42 0 0 chr2 82366445 82366493 -168321361 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 1891 129 4 0 chr2 82366495 82366775 -168321079 - AluSg SINE Alu -29 281 1 26 0 0 0 chr2 82366829 82366855 -168320999 + AT_rich Low_complexity Low_complexity 1 26 0 2404 78 0 0 chr2 82366900 82367209 -168320645 - AluY SINE Alu -2 309 1 943 304 150 20 chr2 82367255 82368006 -168319848 - L2 LINE L2 -4 3309 2458 384 365 40 35 chr2 82368087 82368509 -168319345 - MLT1J LTR MaLR -50 461 38 1415 231 14 0 chr2 82368515 82368810 -168319044 + AluJo SINE Alu 1 299 -13 496 297 210 0 chr2 82368866 82369142 -168318712 - L2 LINE L2 -947 2367 2034 225 333 23 8 chr2 82369174 82369306 -168318548 - L1M4 LINE L1 -1354 4792 4659 1364 197 21 54 chr2 82369974 82370880 -168316974 - L1MD1 LINE L1 -8 6234 5143 785 220 23 0 chr2 82371461 82371634 -168316220 - MER45A DNA AcHobo 0 178 2 1859 122 68 0 chr2 82372713 82372992 -168314862 + AluSg SINE Alu 5 302 -8 25 51 0 0 chr2 82373625 82373664 -168314190 + AT_rich Low_complexity Low_complexity 1 39 0 242 261 111 71 chr2 82373968 82374293 -168313561 + L1M4 LINE L1 4477 4814 -1332 286 284 16 39 chr2 82374611 82374738 -168313116 + L1ME LINE L1 12 135 -5935 1575 209 3 3 chr2 82374955 82375261 -168312593 - AluJb SINE Alu -6 306 1 816 158 15 0 chr2 82375261 82375394 -168312460 - AluJb SINE Alu -177 135 1 295 289 77 39 chr2 82375843 82376051 -168311803 - L1M4 LINE L1 -3382 2764 2549 2628 55 0 0 chr2 82376245 82376556 -168311298 - AluY SINE Alu 0 311 1 358 229 149 17 chr2 82376565 82376740 -168311114 - L1M4 LINE L1 -3739 2407 2210 258 157 20 0 chr2 82377194 82377245 -168310609 - HSMAR1 DNA Mariner 0 1287 1236 22 35 0 0 chr2 82377268 82377297 -168310557 + AT_rich Low_complexity Low_complexity 1 29 0 334 242 0 0 chr2 82377631 82377697 -168310157 - MER67D LTR ERV1 -443 71 6 201 250 0 0 chr2 82379309 82379349 -168308505 + (ATG)n Simple_repeat Simple_repeat 3 42 0 24 0 0 0 chr2 82379471 82379495 -168308359 + AT_rich Low_complexity Low_complexity 1 24 0 331 327 0 62 chr2 82380376 82380471 -168307383 - MIR SINE MIR -13 249 167 2210 174 34 42 chr2 82380471 82380942 -168306912 + MLT1C LTR MaLR 1 467 0 331 327 0 62 chr2 82380942 82381008 -168306846 - MIR SINE MIR -95 167 98 207 283 20 71 chr2 82381038 82381137 -168306717 - L2 LINE L2 -244 3028 2935 183 80 0 0 chr2 82381327 82381352 -168306502 + (TTC)n Simple_repeat Simple_repeat 3 27 0 666 177 73 0 chr2 82381366 82381490 -168306364 - AluJb SINE Alu -179 133 1 185 297 151 5 chr2 82382422 82382607 -168305247 - L2 LINE L2 -54 3259 3048 1195 255 107 27 chr2 82382660 82383138 -168304716 - MLT1E2 LTR MaLR 0 626 111 26 0 0 0 chr2 82384681 82384707 -168303147 + AT_rich Low_complexity Low_complexity 1 26 0 1661 158 4 3 chr2 82385134 82385515 -168302339 + L1MA7 LINE L1 5175 5555 -736 2885 170 29 17 chr2 82385529 82386123 -168301731 + L1MA7 LINE L1 5685 6285 -6 317 275 100 85 chr2 82386547 82386615 -168301239 + L2 LINE L2 3111 3176 -137 2398 84 0 3 chr2 82386615 82386925 -168300929 - AluSq SINE Alu -4 309 1 317 275 100 85 chr2 82386925 82387056 -168300798 + L2 LINE L2 3176 3313 0 24 85 0 0 chr2 82387423 82387482 -168300372 + AT_rich Low_complexity Low_complexity 1 59 0 2082 110 3 7 chr2 82388396 82388695 -168299159 + AluY SINE Alu 1 298 -13 206 257 99 69 chr2 82388876 82388977 -168298877 - L2 LINE L2 0 3272 3169 2191 90 3 47 chr2 82389872 82390193 -168297661 + AluSg SINE Alu 4 310 0 354 219 40 106 chr2 82390771 82390922 -168296932 - MIR SINE MIR -3 259 119 345 305 86 0 chr2 82390921 82391049 -168296805 - MIR SINE MIR -33 229 91 * 22 0 0 0 chr2 82392647 82392669 -168295185 + AT_rich Low_complexity Low_complexity 1 22 0 200 222 0 19 chr2 82392942 82392996 -168294858 + T-rich Low_complexity Low_complexity 3 55 0 25 0 0 0 chr2 82393796 82393821 -168294033 + AT_rich Low_complexity Low_complexity 1 25 0 264 283 28 57 chr2 82394668 82394774 -168293080 - L2 LINE L2 0 3313 3211 721 311 153 20 chr2 82395440 82395504 -168292350 - L2 LINE L2 -923 2391 2337 1657 221 34 25 chr2 82395504 82395862 -168291992 + MLT1A1 LTR MaLR 1 361 -4 721 311 153 20 chr2 82395862 82396247 -168291607 - L2 LINE L2 -977 2337 1882 295 341 88 28 chr2 82397224 82397406 -168290448 + MIR3 SINE MIR 2 194 -14 501 242 15 23 chr2 82397932 82398048 -168289806 - MER119 DNA MER1_type 0 583 469 1352 165 64 0 chr2 82398048 82398297 -168289557 - MER65A LTR ERV1 0 445 181 721 161 62 0 chr2 82398297 82398427 -168289427 - FLAM_C SINE Alu -5 138 1 912 168 10 64 chr2 82398427 82398630 -168289224 - MER65A LTR ERV1 -253 192 1 680 260 40 26 chr2 82398630 82398857 -168288997 - MER65A-int LTR ERV1 0 4871 4642 301 310 52 0 chr2 82399239 82399355 -168288499 - MER117 DNA MER1_type -6 191 70 973 217 42 28 chr2 82400683 82400900 -168286954 - MER58A DNA MER1_type -4 220 1 192 182 0 0 chr2 82400966 82401010 -168286844 + (TA)n Simple_repeat Simple_repeat 2 45 0 2537 36 3 7 chr2 82401893 82402196 -168285658 + AluY SINE Alu 1 302 -9 754 260 75 5 chr2 82402200 82402400 -168285454 - MIR SINE MIR -34 228 15 407 347 132 34 chr2 82402915 82403705 -168284149 - L1M4 LINE L1 -886 5260 4394 30 27 0 0 chr2 82404141 82404178 -168283676 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr2 82404265 82404288 -168283566 + AT_rich Low_complexity Low_complexity 1 23 0 365 342 8 0 chr2 82405212 82405329 -168282525 + L2 LINE L2 2586 2703 -611 674 327 46 35 chr2 82405373 82405746 -168282108 + L2 LINE L2 2936 3312 -1 332 281 152 22 chr2 82406686 82406864 -168280990 + LTR16C LTR ERVL 225 425 -66 912 298 59 37 chr2 82407044 82407554 -168280300 + LTR33 LTR ERVL 1 521 0 22 88 0 0 chr2 82408311 82408368 -168279486 + AT_rich Low_complexity Low_complexity 1 57 0 333 301 28 7 chr2 82408406 82408549 -168279305 - HAL1 LINE L1 -828 1679 1534 332 266 82 44 chr2 82408589 82408747 -168279107 - HAL1 LINE L1 -1346 1161 998 665 151 9 0 chr2 82408749 82408855 -168278999 + U6 snRNA snRNA 1 107 0 22 43 0 21 chr2 82408902 82408930 -168278924 + AT_rich Low_complexity Low_complexity 1 29 -17 829 86 0 0 chr2 82408930 82409035 -168278819 + U6 snRNA snRNA 1 105 -2 22 43 0 21 chr2 82409035 82409053 -168278801 + AT_rich Low_complexity Low_complexity 29 46 0 933 257 0 0 chr2 82409683 82409889 -168277965 + L1MCa LINE L1 20 225 -6201 1316 212 42 12 chr2 82409954 82410413 -168277441 + LTR48 LTR ERV1 123 542 0 799 187 34 81 chr2 82410413 82410622 -168277232 + L1MCa LINE L1 223 421 -6005 * 4996 175 14 12 chr2 82410609 82411830 -168276024 + L1PB3 LINE L1 4808 6033 -121 2856 19 0 0 chr2 82411830 82412147 -168275707 + AluYb8 SINE Alu 1 317 -1 4996 175 14 12 chr2 82412147 82412268 -168275586 + L1PB3 LINE L1 6033 6152 -2 2260 248 25 10 chr2 82412308 82413027 -168274827 + L1MCa LINE L1 2445 3174 -3252 37 0 0 0 chr2 82413379 82413416 -168274438 + AT_rich Low_complexity Low_complexity 1 37 0 34 0 0 0 chr2 82414888 82414922 -168272932 + AT_rich Low_complexity Low_complexity 1 34 0 1574 127 58 7 chr2 82414922 82415214 -168272640 - L1MA4 LINE L1 -7 6293 5987 392 145 0 13 chr2 82415226 82415302 -168272552 - L1MA5 LINE L1 -4 6296 6222 1281 246 58 36 chr2 82415302 82415750 -168272104 + MER74B LTR ERVL 91 548 -74 308 162 71 61 chr2 82415663 82415762 -168272092 - MER88 LTR ERVL -286 178 79 * 211 322 35 23 chr2 82416721 82416808 -168271046 + MIR SINE MIR 18 105 -157 460 307 117 9 chr2 82416918 82417149 -168270705 - MIR SINE MIR 0 262 7 1237 279 70 29 chr2 82417387 82417831 -168270023 + LTR16B LTR ERVL 1 462 -2 28 0 0 0 chr2 82418047 82418075 -168269779 + AT_rich Low_complexity Low_complexity 1 28 0 2107 118 0 10 chr2 82418982 82419288 -168268566 - AluSx SINE Alu -3 309 7 439 171 0 0 chr2 82419433 82419509 -168268345 - FLAM_A SINE Alu -25 117 42 359 261 35 17 chr2 82420341 82420456 -168267398 - MIR SINE MIR -65 197 81 235 269 0 0 chr2 82420528 82420580 -168267274 - MIR SINE MIR 0 262 211 2230 127 3 0 chr2 82420587 82420917 -168266937 - L1PA16 LINE L1 -9 6157 5827 455 296 40 0 chr2 82420917 82421042 -168266812 - MIR SINE MIR -33 229 100 3829 173 50 3 chr2 82421448 82422211 -168265643 + MER6 DNA MER2_type 23 821 -44 525 306 119 23 chr2 82422214 82422524 -168265330 - LTR16A LTR ERVL -29 421 82 2170 109 3 31 chr2 82422857 82423179 -168264675 - AluSq SINE Alu 0 313 1 457 259 52 52 chr2 82423888 82424062 -168263792 + MER69A DNA AcHobo 4 177 0 218 267 0 17 chr2 82424322 82424382 -168263472 - L2 LINE L2 -9 3304 3246 243 0 0 0 chr2 82424736 82424763 -168263091 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 238 384 122 25 chr2 82424782 82425027 -168262827 - L2 LINE L2 -27 3245 2977 254 329 75 12 chr2 82425168 82425329 -168262525 + MIR SINE MIR 32 202 -60 252 314 124 9 chr2 82425845 82425950 -168261904 - MIR SINE MIR -111 151 35 332 303 103 13 chr2 82426351 82426506 -168261348 + L3 LINE CR1 418 586 -991 228 218 0 0 chr2 82427606 82427661 -168260193 + (CA)n Simple_repeat Simple_repeat 2 56 0 1384 236 74 15 chr2 82427952 82428427 -168259427 + L1MA10 LINE L1 5818 6320 -14 1978 99 0 11 chr2 82428427 82428700 -168259154 + AluY SINE Alu 41 310 -1 32 57 0 0 chr2 82429313 82429366 -168258488 + AT_rich Low_complexity Low_complexity 1 53 0 779 314 155 13 chr2 82429689 82430336 -168257518 + L2 LINE L2 2568 3312 -1 617 346 68 13 chr2 82431071 82431455 -168256399 - HERVL LTR ERVL -1522 4132 3728 547 291 178 0 chr2 82431940 82432153 -168255701 + MIR SINE MIR 2 252 -10 944 292 175 12 chr2 82432577 82433163 -168254691 - L2 LINE L2 -1 3312 2603 261 302 31 78 chr2 82433198 82433390 -168254464 - L2 LINE L2 -874 2440 2258 223 261 0 0 chr2 82433402 82433448 -168254406 + (TATG)n Simple_repeat Simple_repeat 3 48 0 188 265 20 20 chr2 82434280 82434329 -168253525 + L3 LINE CR1 1082 1130 -447 319 324 22 16 chr2 82434554 82434739 -168253115 + L1ME3A LINE L1 5700 5885 -279 4107 163 91 28 chr2 82434753 82435564 -168252290 - MER21B LTR ERV1 -1 862 1 288 284 21 21 chr2 82435571 82435712 -168252142 + L1ME3A LINE L1 6025 6165 -5 2685 10 0 0 chr2 82435954 82436251 -168251603 - AluYa5 SINE Alu -14 297 1 260 284 49 0 chr2 82436822 82436903 -168250951 - MIR SINE MIR -72 190 106 2920 84 10 62 chr2 82437529 82438015 -168249839 - L1PA13 LINE L1 -7 6156 5696 1088 214 0 0 chr2 82438033 82438234 -168249620 + MER58A DNA MER1_type 10 210 -14 2092 110 52 0 chr2 82438234 82438525 -168249329 - AluSq SINE Alu -7 306 1 205 195 0 0 chr2 82439399 82439440 -168248414 + (TAA)n Simple_repeat Simple_repeat 2 42 0 450 0 0 0 chr2 82440388 82440438 -168247416 + (CA)n Simple_repeat Simple_repeat 2 51 0 342 320 65 33 chr2 82440811 82440964 -168246890 - MIR SINE MIR -104 158 1 21 36 0 0 chr2 82441413 82441441 -168246413 + AT_rich Low_complexity Low_complexity 1 28 0 492 224 47 0 chr2 82442556 82442663 -168245191 - MIR SINE MIR 0 262 151 339 236 0 0 chr2 82442663 82442735 -168245119 - MER45 DNA AcHobo -1 1580 1509 188 244 22 0 chr2 82442828 82442873 -168244981 - MIR SINE MIR -113 149 104 1885 184 141 0 chr2 82443243 82443668 -168244186 + MLT1D LTR MaLR 21 505 0 246 32 0 0 chr2 82443900 82443931 -168243923 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 405 0 0 0 chr2 82445047 82445092 -168242762 + (CA)n Simple_repeat Simple_repeat 1 45 0 22 35 0 0 chr2 82445391 82445420 -168242434 + AT_rich Low_complexity Low_complexity 1 29 0 224 157 39 0 chr2 82445677 82445728 -168242126 + GA-rich Low_complexity Low_complexity 3 55 0 2440 188 32 8 chr2 82445732 82446231 -168241623 + MER67D LTR ERV1 2 512 -2 279 365 10 19 chr2 82447661 82447765 -168240089 + MIR SINE MIR 2 104 -158 766 295 23 27 chr2 82448473 82448734 -168239120 + MIR SINE MIR 3 262 0 199 208 0 113 chr2 82449129 82449182 -168238672 - L2 LINE L2 0 3272 3226 1960 115 0 14 chr2 82451584 82451862 -168235992 + AluSg SINE Alu 36 309 -1 1862 98 42 49 chr2 82451871 82452193 -168235661 + AluSg SINE Alu 1 320 0 21 0 0 0 chr2 82452278 82452299 -168235555 + AT_rich Low_complexity Low_complexity 1 21 0 318 123 35 0 chr2 82452366 82452423 -168235431 + Tigger2 DNA MER2_type 4 62 -2656 1801 154 7 0 chr2 82452423 82452728 -168235126 + Tigger2 DNA MER2_type 2399 2705 -13 700 191 32 0 chr2 82452846 82452972 -168234882 + FLAM_C SINE Alu 1 130 -3 240 143 0 78 chr2 82453937 82454014 -168233840 + (TAAA)n Simple_repeat Simple_repeat 4 74 0 204 318 91 35 chr2 82456143 82456341 -168231513 + L2 LINE L2 2852 3060 -212 221 258 195 42 chr2 82456512 82456702 -168231152 + MIR SINE MIR 1 219 -43 329 357 93 0 chr2 82456721 82456850 -168231004 - MIR3 SINE MIR -47 161 21 2410 121 43 68 chr2 82458014 82458296 -168229558 - MSTA LTR MaLR 0 428 159 2470 75 0 0 chr2 82458296 82458601 -168229253 + AluY SINE Alu 1 305 -6 2410 121 43 68 chr2 82458601 82458757 -168229097 - MSTA LTR MaLR -269 159 1 240 239 0 0 chr2 82459516 82459562 -168228292 - L2 LINE L2 -11 3261 3216 224 370 0 12 chr2 82459598 82459679 -168228175 - MIR SINE MIR -182 80 1 399 21 0 0 chr2 82459734 82459782 -168228072 + (CA)n Simple_repeat Simple_repeat 2 49 0 367 310 143 23 chr2 82461060 82461318 -168226536 - L2 LINE L2 -338 2976 2688 389 271 45 52 chr2 82463887 82464042 -168223812 - L2 LINE L2 -4 3309 3156 559 318 134 46 chr2 82464579 82465254 -168222600 - L2 LINE L2 -266 3047 2314 675 311 110 18 chr2 82465944 82466381 -168221473 - L2 LINE L2 -9 3304 2828 393 233 25 50 chr2 82466758 82466878 -168220976 - MER20 DNA MER1_type -102 117 1 1256 196 35 0 chr2 82468240 82468551 -168219303 + MER33 DNA MER1_type 1 322 -2 184 233 0 23 chr2 82469303 82469346 -168218508 + L3 LINE CR1 1426 1467 -110 23 33 0 0 chr2 82469837 82469867 -168217987 + AT_rich Low_complexity Low_complexity 1 30 0 195 337 63 21 chr2 82470012 82470107 -168217747 - L2 LINE L2 -35 3237 3139 26 0 0 0 chr2 82470484 82470510 -168217344 + AT_rich Low_complexity Low_complexity 1 26 0 360 0 0 0 chr2 82471711 82471751 -168216103 + (CA)n Simple_repeat Simple_repeat 2 41 0 190 335 37 69 chr2 82472155 82472343 -168215511 - MIR SINE MIR -78 184 3 236 341 24 73 chr2 82472401 82472524 -168215330 - MIR SINE MIR -140 122 6 602 260 170 14 chr2 82474442 82474665 -168213189 - MIR SINE MIR 0 262 5 557 198 99 113 chr2 82474932 82475154 -168212700 - MER20 DNA MER1_type 0 219 1 283 344 31 39 chr2 82475400 82475501 -168212353 + MIR3 SINE MIR 6 107 -101 279 79 0 0 chr2 82475501 82475539 -168212315 + (TTA)n Simple_repeat Simple_repeat 1 38 0 283 344 31 39 chr2 82475539 82475565 -168212289 + MIR3 SINE MIR 107 132 -76 1123 277 70 36 chr2 82475913 82476382 -168211472 + MLT1J LTR MaLR 13 497 -14 549 301 106 22 chr2 82476433 82476659 -168211195 - MLT1K LTR MaLR -14 574 330 260 294 63 92 chr2 82477475 82477778 -168210076 + L2 LINE L2 2682 2975 -339 760 42 0 0 chr2 82477878 82477973 -168209881 - L1PA3 LINE L1 -2 6153 6059 319 317 30 0 chr2 82478116 82478217 -168209637 + L2 LINE L2 3169 3272 0 21 0 0 0 chr2 82479125 82479146 -168208708 + AT_rich Low_complexity Low_complexity 1 21 0 467 197 162 21 chr2 82479730 82479872 -168207982 + MIR SINE MIR 6 167 -95 986 244 127 61 chr2 82481060 82481593 -168206261 + MLT1E LTR MaLR 1 626 0 186 43 0 0 chr2 82481670 82481693 -168206161 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 494 300 131 33 chr2 82482025 82482605 -168205249 + L1MEd LINE L1 483 1119 -5000 278 305 80 72 chr2 82482621 82483285 -168204569 + L1MB5 LINE L1 2963 3620 -2526 2130 134 0 0 chr2 82483285 82483591 -168204263 - AluSx SINE Alu -6 306 1 278 305 80 72 chr2 82483591 82484294 -168203560 + L1MB5 LINE L1 3620 4341 -1805 381 198 0 0 chr2 82484337 82484423 -168203431 + (TA)n Simple_repeat Simple_repeat 1 86 0 381 229 0 0 chr2 82484505 82484610 -168203244 + (CATATA)n Simple_repeat Simple_repeat 4 108 0 239 274 0 0 chr2 82484750 82484812 -168203042 + L1MB5 LINE L1 4551 4612 -1534 254 282 0 0 chr2 82484996 82485074 -168202780 + L1P LINE L1 4935 5012 -1134 219 220 0 0 chr2 82485161 82485211 -168202643 + (TA)n Simple_repeat Simple_repeat 2 51 0 1366 173 3 108 chr2 82485214 82485377 -168202477 - AluJb SINE Alu -13 289 175 450 0 0 0 chr2 82485377 82485427 -168202427 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 1366 173 3 108 chr2 82485427 82485586 -168202268 - AluJb SINE Alu -127 175 1 571 309 39 73 chr2 82485747 82486309 -168201545 + L1MB5 LINE L1 5328 5867 -307 * 3951 81 43 0 chr2 82486297 82486938 -168200916 - L1PA7 LINE L1 -311 5843 5177 2478 67 0 15 chr2 82486938 82487268 -168200586 + L1PA7 LINE L1 5823 6148 -6 2177 214 62 84 chr2 82487849 82488540 -168199314 - LTR8 LTR ERV1 0 691 16 225 114 136 23 chr2 82488545 82488589 -168199265 - LTR8 LTR ERV1 -642 49 1 290 238 0 0 chr2 82489348 82489411 -168198443 + L1ME4a LINE L1 5985 6047 -74 32 26 0 0 chr2 82489926 82489965 -168197889 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr2 82490629 82490653 -168197201 + AT_rich Low_complexity Low_complexity 1 24 0 334 298 156 28 chr2 82490787 82490928 -168196926 - L2 LINE L2 0 3272 3114 234 258 30 0 chr2 82491538 82491604 -168196250 - L2 LINE L2 -209 3063 2996 551 340 62 43 chr2 82491632 82492196 -168195658 - L2 LINE L2 -443 2871 2297 273 79 0 0 chr2 82492545 82492583 -168195271 - MADE1 DNA Mariner -34 46 9 219 69 0 0 chr2 82492584 82492613 -168195241 + (TG)n Simple_repeat Simple_repeat 1 29 0 957 286 40 0 chr2 82492739 82492991 -168194863 - MIR SINE MIR 0 262 1 486 277 132 35 chr2 82493149 82493459 -168194395 - MLT1I LTR MaLR -4 405 66 2080 138 0 0 chr2 82494190 82494488 -168193366 + AluSx SINE Alu 1 298 -14 219 271 0 14 chr2 82494762 82494832 -168193022 + (TA)n Simple_repeat Simple_repeat 1 69 0 257 118 20 0 chr2 82494833 82494884 -168192970 + (CA)n Simple_repeat Simple_repeat 1 52 0 412 242 0 11 chr2 82495348 82495439 -168192415 + MIR SINE MIR 32 121 -141 238 259 19 0 chr2 82495469 82495523 -168192331 - MER77 LTR ERV1 -9 596 542 529 273 116 22 chr2 82495523 82495886 -168191968 - L1MEc LINE L1 -5047 1349 953 254 281 12 12 chr2 82495890 82495972 -168191882 - L1MEc LINE L1 -6279 117 36 23 68 0 0 chr2 82496064 82496108 -168191746 + AT_rich Low_complexity Low_complexity 1 44 0 21 71 0 0 chr2 82496390 82496432 -168191422 + AT_rich Low_complexity Low_complexity 1 42 0 26 30 0 0 chr2 82496693 82496726 -168191128 + AT_rich Low_complexity Low_complexity 1 33 0 201 193 102 91 chr2 82497932 82498020 -168189834 + MER5A DNA MER1_type 35 123 -66 377 380 153 0 chr2 82498034 82498171 -168189683 + MER91A DNA MER1_type 15 172 -24 366 42 0 0 chr2 82498219 82498267 -168189587 + (TG)n Simple_repeat Simple_repeat 2 49 0 27 49 0 0 chr2 82498592 82498633 -168189221 + AT_rich Low_complexity Low_complexity 1 41 0 705 206 0 0 chr2 82498900 82499031 -168188823 + FLAM_A SINE Alu 6 136 -6 1994 274 45 18 chr2 82500007 82500260 -168187594 + L1ME2 LINE L1 5451 5695 -469 2366 97 0 0 chr2 82500260 82500569 -168187285 - AluSc SINE Alu 0 309 1 1994 274 45 18 chr2 82500569 82501000 -168186854 + L1ME2 LINE L1 5695 6154 -10 1841 238 82 33 chr2 82501070 82501138 -168186716 - MLT1F LTR MaLR 0 542 479 2108 104 4 0 chr2 82501138 82501440 -168186414 + AluSx SINE Alu 3 305 0 1841 238 82 33 chr2 82501440 82501858 -168185996 - MLT1F LTR MaLR -63 479 31 280 283 22 22 chr2 82501946 82502084 -168185770 + L1MC4 LINE L1 7904 8041 -1 4705 151 32 4 chr2 82504791 82505545 -168182309 - LTR39 LTR ERV1 0 783 9 522 238 49 60 chr2 82505726 82505911 -168181943 + LTR50 LTR ERVL 1 183 -612 1313 250 99 42 chr2 82506243 82506790 -168181064 + MLT1E1 LTR MaLR 26 654 0 414 0 0 0 chr2 82506822 82506868 -168180986 + (CA)n Simple_repeat Simple_repeat 1 46 0 2327 113 7 0 chr2 82509268 82509578 -168178276 - AluSx SINE Alu 0 312 1 2270 94 0 17 chr2 82510679 82510977 -168176877 - AluSq SINE Alu -20 293 1 1046 238 5 5 chr2 82511006 82511220 -168176634 + MER58A DNA MER1_type 11 224 0 513 137 29 0 chr2 82511481 82511583 -168176271 + L1MB3 LINE L1 6079 6183 0 1676 272 63 14 chr2 82511786 82512499 -168175355 + L1ME2 LINE L1 3367 4114 -2032 2519 241 57 53 chr2 82512517 82514176 -168173678 + L1ME2 LINE L1 4450 6124 -40 2800 10 0 0 chr2 82514245 82514552 -168173302 - AluYa5 SINE Alu -4 307 1 4735 201 46 49 chr2 82514558 82514935 -168172919 - L1MB3 LINE L1 -3 6180 5804 270 0 0 0 chr2 82514935 82514965 -168172889 + (CA)n Simple_repeat Simple_repeat 2 31 0 4735 201 46 49 chr2 82514965 82516500 -168171354 - L1MB3 LINE L1 -379 5804 4265 189 74 0 0 chr2 82516500 82516527 -168171327 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 4735 201 46 49 chr2 82516527 82516739 -168171115 - L1MB3 LINE L1 -1918 4265 4054 1703 216 56 20 chr2 82516734 82517234 -168170620 - L1MB3 LINE L1 -2502 3644 3127 * 228 222 0 0 chr2 82517351 82517396 -168170458 + (TGAG)n Simple_repeat Simple_repeat 4 48 0 271 332 114 45 chr2 82517504 82517706 -168170148 - MIR SINE MIR -16 246 31 208 325 114 18 chr2 82518844 82519010 -168168844 + MIR SINE MIR 67 248 -14 2322 97 3 0 chr2 82519044 82519355 -168168499 - AluSx SINE Alu 0 312 1 359 354 51 13 chr2 82519397 82519555 -168168299 + MIR3 SINE MIR 20 183 -25 386 329 35 7 chr2 82521452 82521595 -168166259 + MIR SINE MIR 31 177 -85 625 261 75 15 chr2 82521617 82521816 -168166038 - MIR SINE MIR -30 232 22 1803 161 173 20 chr2 82522038 82522436 -168165418 - MLT1C LTR MaLR -6 461 3 377 234 16 73 chr2 82522563 82522687 -168165167 + MIR SINE MIR 120 236 -26 751 206 141 16 chr2 82524105 82524289 -168163565 - MER20 DNA MER1_type -5 214 8 971 233 35 13 chr2 82524528 82524756 -168163098 + L1M4b LINE L1 4 236 -6623 369 268 29 7 chr2 82524824 82524962 -168162892 + L1MC5 LINE L1 7355 7495 -466 2747 91 0 0 chr2 82526624 82526974 -168160880 - THE1A LTR MaLR -5 350 1 258 260 228 0 chr2 82527148 82527271 -168160583 + MER112 DNA MER1_type 67 217 -43 1484 245 26 14 chr2 82528414 82528765 -168159089 + MLT1A1 LTR MaLR 3 357 -8 534 356 13 4 chr2 82528771 82528996 -168158858 - MIR SINE MIR -29 233 7 297 325 145 42 chr2 82529219 82529930 -168157924 + L2 LINE L2 1701 2484 -830 399 268 67 86 chr2 82530098 82530330 -168157524 - MIR SINE MIR -25 237 3 2392 110 0 0 chr2 82531531 82531841 -168156013 - AluSx SINE Alu -2 310 1 2218 76 17 3 chr2 82532382 82532672 -168155182 - AluSx SINE Alu -18 294 1 344 321 21 14 chr2 82534238 82534378 -168153476 + MIR SINE MIR 120 260 -2 305 143 92 151 chr2 82534572 82534691 -168153163 + LTR37A LTR ERV1 4 115 -311 393 219 92 0 chr2 82534713 82534832 -168153022 + LTR37A LTR ERV1 296 425 -1 2258 92 27 0 chr2 82535804 82536098 -168151756 + AluY SINE Alu 2 303 -8 439 146 138 41 chr2 82536338 82536461 -168151393 + L1MA8 LINE L1 6157 6291 0 228 352 29 9 chr2 82536621 82536726 -168151128 - L3 LINE CR1 -3 1574 1468 1642 160 17 27 chr2 82537287 82537587 -168150267 - AluJb SINE Alu -10 302 6 756 199 39 0 chr2 82537690 82537846 -168150008 + L1MA9 LINE L1 6115 6276 -36 229 227 149 35 chr2 82538154 82538295 -168149559 + MIR3 SINE MIR 3 159 -49 664 189 45 0 chr2 82538309 82538441 -168149413 - MER58B DNA MER1_type -13 328 191 2232 88 0 0 chr2 82539474 82539757 -168148097 + AluSx SINE Alu 24 306 -6 223 315 100 0 chr2 82539965 82540095 -168147759 - MIR SINE MIR -36 226 84 199 318 91 35 chr2 82540530 82540728 -168147126 + L2 LINE L2 2852 3060 -212 204 258 195 42 chr2 82540899 82541089 -168146765 + MIR SINE MIR 1 219 -43 317 357 93 0 chr2 82541108 82541237 -168146617 - MIR3 SINE MIR -47 161 21 2607 121 43 68 chr2 82542401 82542683 -168145171 - MSTA LTR MaLR 0 428 159 2420 77 0 0 chr2 82542683 82542981 -168144873 + AluY SINE Alu 1 298 -13 2607 121 43 68 chr2 82542981 82543137 -168144717 - MSTA LTR MaLR -269 159 1 236 239 0 0 chr2 82543895 82543941 -168143913 - L2 LINE L2 -11 3261 3216 218 370 0 12 chr2 82543977 82544058 -168143796 - MIR SINE MIR -182 80 1 363 23 0 0 chr2 82544113 82544157 -168143697 + (CA)n Simple_repeat Simple_repeat 2 45 0 358 310 143 23 chr2 82545435 82545693 -168142161 - L2 LINE L2 -338 2976 2688 348 277 45 52 chr2 82548262 82548417 -168139437 - L2 LINE L2 -4 3309 3156 540 316 134 46 chr2 82548954 82549629 -168138225 - L2 LINE L2 -266 3047 2314 654 311 110 18 chr2 82550319 82550756 -168137098 - L2 LINE L2 -9 3304 2828 424 242 25 50 chr2 82551133 82551253 -168136601 - MER20 DNA MER1_type -102 117 1 1492 192 29 0 chr2 82552615 82552928 -168134926 + MER33 DNA MER1_type 1 322 -2 23 33 0 0 chr2 82554212 82554242 -168133612 + AT_rich Low_complexity Low_complexity 1 30 0 184 337 63 21 chr2 82554387 82554482 -168133372 - L2 LINE L2 -35 3237 3139 26 0 0 0 chr2 82554849 82554875 -168132979 + AT_rich Low_complexity Low_complexity 1 26 0 410 0 20 0 chr2 82556076 82556126 -168131728 + (CA)n Simple_repeat Simple_repeat 2 52 0 245 333 24 73 chr2 82556778 82556901 -168130953 - MIR SINE MIR -140 122 6 580 326 82 0 chr2 82559533 82559766 -168128088 + MIR SINE MIR 7 258 -4 300 284 12 0 chr2 82560167 82560248 -168127606 - MIR SINE MIR -30 232 151 185 365 47 9 chr2 82561826 82561933 -168125921 - MIR3 SINE MIR -53 155 45 26 0 0 0 chr2 82561992 82562018 -168125836 + AT_rich Low_complexity Low_complexity 1 26 0 474 299 106 71 chr2 82562067 82562502 -168125352 + MLT1H1 LTR MaLR 104 553 -2 1089 258 12 4 chr2 82562850 82563106 -168124748 - MER47B DNA MER2_type -160 258 1 587 314 91 24 chr2 82563211 82563922 -168123932 - L1M4 LINE L1 -1700 4446 3688 1124 263 69 28 chr2 82563937 82564515 -168123339 - L1MC5 LINE L1 -24 7937 7336 541 161 58 29 chr2 82564527 82564664 -168123190 - Charlie1 DNA MER1_type -7 2754 2614 1643 250 107 25 chr2 82564670 82565194 -168122660 - Charlie1a DNA MER1_type -883 572 6 28 0 0 0 chr2 82565479 82565507 -168122347 + AT_rich Low_complexity Low_complexity 1 28 0 278 258 45 0 chr2 82568987 82569076 -168118778 - MER5C DNA MER1_type 0 324 232 4126 258 87 75 chr2 82569076 82570310 -168117544 + L1MCa LINE L1 1 1219 -5345 1991 91 0 19 chr2 82570310 82570575 -168117279 - AluSx SINE Alu -15 297 38 4126 258 87 75 chr2 82570575 82572875 -168114979 + L1MCa LINE L1 1219 3719 -2845 1501 196 162 18 chr2 82572882 82573321 -168114533 + MLT1D LTR MaLR 4 505 0 608 49 0 0 chr2 82573360 82573442 -168114412 - L1PA7 LINE L1 -936 5210 5129 7152 51 0 2 chr2 82573442 82574389 -168113465 + L1PA7 LINE L1 5202 6146 -8 384 315 41 0 chr2 82574394 82574661 -168113193 + L1MCa LINE L1 3750 4027 -2537 457 271 121 5 chr2 82574721 82574928 -168112926 - MER5C DNA MER1_type -93 231 1 293 238 48 0 chr2 82575352 82575436 -168112418 + MER53 DNA DNA 18 105 -84 240 291 58 26 chr2 82575651 82575840 -168112014 - L1M4 LINE L1 -2505 3641 3447 1954 150 23 3 chr2 82575879 82576185 -168111669 + AluSx SINE Alu 1 312 0 2000 157 0 3 chr2 82577956 82578262 -168109592 - AluJb SINE Alu -7 305 1 530 298 129 38 chr2 82578394 82578837 -168109017 - MLT1L LTR MaLR -12 603 121 232 247 101 11 chr2 82580781 82580870 -168106984 + MER103 DNA DNA 3 99 -67 601 241 72 17 chr2 82581038 82581274 -168106580 - MER112 DNA MER1_type -4 252 4 2064 240 79 41 chr2 82582189 82582893 -168104961 - L1ME1 LINE L1 -6 6160 5484 1483 159 4 11 chr2 82582893 82583157 -168104697 + L1PA15 LINE L1 5899 6160 -5 2064 240 79 41 chr2 82583157 82583711 -168104143 - L1ME1 LINE L1 -682 5484 4830 1731 186 0 0 chr2 82583711 82584006 -168103848 + AluJb SINE Alu 3 297 -15 2064 240 79 41 chr2 82584006 82584287 -168103567 - L1ME1 LINE L1 -1336 4830 4561 * 10448 186 31 11 chr2 82584284 82586333 -168101521 + L1MA2 LINE L1 13 2103 -5462 4796 149 14 19 chr2 82586326 82587462 -168100392 + L1MA2 LINE L1 2785 3911 -3654 * 7156 180 7 54 chr2 82587460 82588971 -168098883 + L1MA2 LINE L1 5068 6484 -1081 2051 136 0 0 chr2 82588971 82589257 -168098597 - AluSx SINE Alu -6 306 21 7156 180 7 54 chr2 82589257 82589527 -168098327 + L1MA2 LINE L1 6484 6765 -800 4101 102 38 5 chr2 82589527 82590179 -168097675 + L1MA2 LINE L1 7048 7723 0 1523 250 59 31 chr2 82590226 82590806 -168097048 + L1MC4a LINE L1 6190 6785 -1023 565 14 27 0 chr2 82590854 82590928 -168096926 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 1543 186 40 59 chr2 82590931 82591479 -168096375 + MLT2A2 LTR ERVL 1 544 -10 842 28 9 0 chr2 82591480 82591589 -168096265 + (TAGA)n Simple_repeat Simple_repeat 2 111 0 2582 75 128 5 chr2 82591589 82591988 -168095866 + LTR7 LTR ERV1 1 448 -2 19175 90 21 19 chr2 82591990 82594968 -168092886 + HERVH LTR ERV1 1 2987 -4726 776 162 20 0 chr2 82594962 82595110 -168092744 + HERVH LTR ERV1 3140 3290 -4423 * 3145 110 8 6 chr2 82595100 82595601 -168092253 + HERVH LTR ERV1 3492 3993 -3720 4180 136 1 1 chr2 82595603 82596265 -168091589 + HERVH LTR ERV1 4488 5149 -2564 1318 124 18 5 chr2 82596266 82596483 -168091371 + HERVH LTR ERV1 5600 5819 -1894 2217 106 48 13 chr2 82596483 82596860 -168090994 + HERVH LTR ERV1 7324 7713 0 2393 97 122 5 chr2 82596860 82597261 -168090593 + LTR7 LTR ERV1 1 448 -2 477 0 0 0 chr2 82597262 82597315 -168090539 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2945 215 83 26 chr2 82597336 82598226 -168089628 + L1MC4a LINE L1 6851 7791 -17 2406 258 32 22 chr2 82598229 82599140 -168088714 - L1M4 LINE L1 -1296 4850 3931 1237 271 49 21 chr2 82599168 82599705 -168088149 + L1MD2 LINE L1 5686 6228 -131 346 394 78 3 chr2 82599777 82600099 -168087755 + L2 LINE L2 1705 2050 -1264 933 221 4 56 chr2 82600729 82600960 -168086894 + MER20 DNA MER1_type 1 219 0 385 267 100 0 chr2 82601132 82601252 -168086602 - MIR SINE MIR -54 208 77 1638 253 22 65 chr2 82602535 82603136 -168084718 + MLT1E LTR MaLR 14 588 -5 544 221 183 0 chr2 82603921 82604052 -168083802 + MER5A DNA MER1_type 35 189 0 1864 163 127 18 chr2 82604144 82604530 -168083324 + MSTA LTR MaLR 1 428 0 1758 145 84 57 chr2 82605804 82606210 -168081644 + MSTB LTR MaLR 8 424 -2 609 238 106 0 chr2 82607093 82607253 -168080601 - MIR SINE MIR 0 262 86 2048 199 48 2 chr2 82607266 82607678 -168080176 + MSTB1 LTR MaLR 1 431 -1 1019 269 225 43 chr2 82607770 82608747 -168079107 - L2 LINE L2 -141 3172 2014 259 221 135 19 chr2 82608801 82608884 -168078970 + MIR SINE MIR 104 203 -59 1050 259 91 34 chr2 82608884 82609358 -168078496 + MLT1D LTR MaLR 5 505 0 259 221 135 19 chr2 82609358 82609378 -168078476 + MIR SINE MIR 203 219 -43 352 172 0 0 chr2 82609662 82609726 -168078128 + LTR1B-int LTR ERV1 6540 6603 -488 * 1865 165 23 8 chr2 82609722 82610074 -168077780 + LTR1B-int LTR ERV1 6734 7090 -1 1860 192 133 77 chr2 82610076 82610858 -168076996 + LTR1B LTR ERV1 1 826 0 633 282 19 38 chr2 82611628 82611837 -168076017 - MIR SINE MIR -29 233 29 283 318 103 51 chr2 82613287 82613482 -168074372 - MIR SINE MIR -49 213 9 962 240 184 3 chr2 82614559 82614880 -168072974 + MSTD LTR MaLR 17 395 -1 22 35 0 0 chr2 82615289 82615318 -168072536 + AT_rich Low_complexity Low_complexity 1 29 0 379 261 64 19 chr2 82615484 82615641 -168072213 + L1M4 LINE L1 3326 3489 -2657 298 307 20 0 chr2 82615958 82616059 -168071795 - MLT1F1 LTR MaLR -396 171 69 1659 216 14 48 chr2 82616117 82616617 -168071237 - L1M4 LINE L1 -423 5761 5279 740 238 6 77 chr2 82616676 82616999 -168070855 - L1M4 LINE L1 -875 5271 4972 839 115 0 0 chr2 82617019 82617132 -168070722 + AluSp SINE Alu 1 113 -200 1194 257 58 29 chr2 82617133 82617685 -168070169 - L1M4 LINE L1 -1246 4900 4333 548 294 52 0 chr2 82617674 82617922 -168069932 - L1M4 LINE L1 -3412 2734 2474 * 27337 110 4 8 chr2 82617928 82623717 -168064137 - L1PA7 LINE L1 -1 6468 697 368 237 10 0 chr2 82623732 82623829 -168064025 - L1M4 LINE L1 -3714 2432 2335 496 243 23 23 chr2 82624049 82624226 -168063628 - MER41B LTR ERV1 -205 430 254 490 215 65 65 chr2 82624403 82624603 -168063251 - L1M4 LINE L1 -3819 2327 2128 471 227 9 0 chr2 82624606 82624716 -168063138 + MLT1B LTR MaLR 1 111 -279 2112 118 36 74 chr2 82628660 82629050 -168058804 - THE1C LTR MaLR 0 375 1 26 30 0 0 chr2 82629428 82629461 -168058393 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 82629556 82629577 -168058277 + AT_rich Low_complexity Low_complexity 1 21 0 1944 138 4 17 chr2 82629645 82630214 -168057640 - LTR10E LTR ERV1 -21 612 1 1671 171 4 0 chr2 82630542 82630817 -168057037 - AluJo SINE Alu -25 287 12 25 31 0 0 chr2 82630828 82630860 -168056994 + AT_rich Low_complexity Low_complexity 1 32 0 618 321 21 13 chr2 82631708 82631945 -168055909 - MIR SINE MIR -7 255 17 2969 90 31 5 chr2 82632221 82632609 -168055245 - MER48 LTR ERV1 0 398 1 39183 111 20 11 chr2 82632609 82636617 -168051237 - HERVH48 LTR ERV1 0 6654 2481 2546 67 0 6 chr2 82636617 82636930 -168050924 + AluY SINE Alu 1 311 0 39183 111 20 11 chr2 82636930 82639435 -168048419 - HERVH48 LTR ERV1 -4173 2481 1 2850 111 31 3 chr2 82639435 82639822 -168048032 - MER48 LTR ERV1 0 398 1 587 219 0 0 chr2 82639822 82639927 -168047927 - MSTC LTR MaLR -323 105 1 1858 227 81 33 chr2 82639927 82640411 -168047443 - MSTD-int LTR MaLR 0 1735 1229 2621 255 37 55 chr2 82640704 82641730 -168046124 - MSTD-int LTR MaLR -642 1093 1 783 250 58 17 chr2 82641730 82642056 -168045798 - MSTD LTR MaLR 0 396 16 2332 83 0 0 chr2 82642399 82642689 -168045165 + AluY SINE Alu 1 290 -21 484 232 26 39 chr2 82642812 82642967 -168044887 - MSTC LTR MaLR -1 395 243 23 54 0 0 chr2 82643012 82643049 -168044805 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 82643303 82643331 -168044523 + AT_rich Low_complexity Low_complexity 1 28 0 498 271 27 77 chr2 82644228 82644384 -168043470 - MIR SINE MIR -32 230 87 1831 151 4 0 chr2 82644384 82644662 -168043192 + L1PA15 LINE L1 5881 6159 -6 498 271 27 77 chr2 82644662 82644726 -168043128 - MIR SINE MIR -175 87 21 264 122 0 0 chr2 82644948 82644989 -168042865 + (TG)n Simple_repeat Simple_repeat 1 41 0 571 243 0 0 chr2 82645014 82645125 -168042729 - MSTC LTR MaLR -317 111 1 2324 256 98 28 chr2 82645127 82645870 -168041984 - MSTD-int LTR MaLR -8 1727 882 43235 36 23 1 chr2 82645885 82651886 -168035968 - L1PA3 LINE L1 0 6155 22 3001 251 13 25 chr2 82652023 82652303 -168035551 - MSTD-int LTR MaLR -953 782 500 1049 105 0 14 chr2 82652303 82652446 -168035408 - L1PA11 LINE L1 -2 6172 6032 3001 251 13 25 chr2 82652446 82652957 -168034897 - MSTD-int LTR MaLR -1235 500 1 689 293 80 16 chr2 82652974 82653295 -168034559 - MSTD LTR MaLR -7 381 13 411 224 0 95 chr2 82654369 82654496 -168033358 + MIR SINE MIR 4 117 -92 324 0 0 0 chr2 82654503 82654539 -168033315 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1831 114 55 0 chr2 82654565 82654819 -168033035 - AluSc SINE Alu -14 295 28 2156 190 19 0 chr2 82655930 82656345 -168031509 - L1MA5 LINE L1 -6 6294 5872 466 312 55 14 chr2 82656707 82656925 -168030929 + MIR SINE MIR 29 255 -7 2238 128 0 0 chr2 82656932 82657236 -168030618 + AluSx SINE Alu 1 304 -8 3860 78 2 0 chr2 82658086 82658572 -168029282 + L1PA13 LINE L1 5669 6155 -8 2171 88 0 67 chr2 82658576 82658905 -168028949 + AluY SINE Alu 5 311 0 1659 169 60 3 chr2 82659220 82659376 -168028478 - AluJb SINE Alu -12 300 154 315 0 0 0 chr2 82659376 82659411 -168028443 + (TA)n Simple_repeat Simple_repeat 2 36 0 1659 169 60 3 chr2 82659411 82659538 -168028316 - AluJb SINE Alu -158 154 1 21 89 0 0 chr2 82659627 82659683 -168028171 + AT_rich Low_complexity Low_complexity 1 56 0 6644 163 22 12 chr2 82663783 82664980 -168022874 - Tigger1 DNA MER2_type -2 2416 1209 4433 159 127 11 chr2 82664972 82665813 -168022041 - Tigger1 DNA MER2_type -1454 964 26 * 507 234 0 0 chr2 82666116 82666227 -168021627 - MLT1B LTR MaLR -279 111 1 272 231 14 105 chr2 82666231 82666374 -168021480 + L1M4 LINE L1 2129 2258 -3888 2033 254 35 32 chr2 82666382 82667099 -168020755 - L1M4 LINE L1 -1095 5051 4333 1226 298 15 29 chr2 82667087 82667598 -168020256 - L1M4 LINE L1 -3411 2735 2257 * 1957 183 15 82 chr2 82667598 82667968 -168019886 - LTR47B LTR ERVL 0 443 110 1794 159 3 23 chr2 82667968 82668277 -168019577 + AluJb SINE Alu 1 303 -9 1957 183 15 82 chr2 82668277 82668381 -168019473 - LTR47B LTR ERVL -333 110 1 243 143 39 26 chr2 82668749 82668826 -168019028 + (TAA)n Simple_repeat Simple_repeat 3 80 0 6050 202 63 33 chr2 82668888 82670341 -168017513 - MER4B-int LTR ERV1 -2038 4720 3225 365 342 69 46 chr2 82670355 82671333 -168016521 - LTR57-int LTR ERVL -1243 4100 3192 896 306 77 47 chr2 82671619 82672444 -168015410 - LTR57-int LTR ERVL -1116 2302 1926 180 0 0 0 chr2 82673162 82673182 -168014672 + (T)n Simple_repeat Simple_repeat 1 20 0 31 0 0 0 chr2 82673342 82673373 -168014481 + AT_rich Low_complexity Low_complexity 1 31 0 1962 202 15 54 chr2 82674455 82674916 -168012938 - LTR47B LTR ERVL 0 443 1 533 175 10 0 chr2 82675053 82675150 -168012704 + MLT1B LTR MaLR 1 98 -292 231 36 0 0 chr2 82679105 82679133 -168008721 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1265 208 78 79 chr2 82679751 82680222 -168007632 - MLT1E2 LTR MaLR -195 459 1 2376 54 58 0 chr2 82680607 82680901 -168006953 - AluY SINE Alu 0 311 1 606 232 0 0 chr2 82680943 82681055 -168006799 + Tigger3(Golem) DNA MER2_type 2918 3029 0 2242 120 3 0 chr2 82681421 82681730 -168006124 + AluSg SINE Alu 1 310 0 1582 168 83 148 chr2 82681784 82682233 -168005621 - LTR40a LTR ERVL 0 519 111 2241 82 45 0 chr2 82682233 82682524 -168005330 + AluSg SINE Alu 1 304 -6 1582 168 83 148 chr2 82682524 82682628 -168005226 - LTR40a LTR ERVL -408 111 2 10096 185 41 41 chr2 82683340 82683610 -168004244 - L1MA9 LINE L1 -374 7357 7089 2187 67 0 0 chr2 82683610 82683878 -168003976 - AluY SINE Alu -17 294 27 10096 185 41 41 chr2 82683878 82685559 -168002295 - L1MA9 LINE L1 -642 7089 5408 2090 124 3 0 chr2 82685559 82685849 -168002005 - AluSq SINE Alu -22 291 1 10096 185 41 41 chr2 82685849 82686938 -168000916 - L1MA9 LINE L1 -2323 5408 4321 2550 124 42 137 chr2 82686927 82687547 -168000307 - L1PB3 LINE L1 -1 6153 5593 * 2834 264 50 23 chr2 82687526 82688954 -167998900 - L1MA9 LINE L1 -3226 4339 2847 180 0 0 0 chr2 82688954 82688974 -167998880 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2834 264 50 23 chr2 82688974 82689243 -167998611 - L1MA9 LINE L1 -4718 2847 2587 16370 219 34 15 chr2 82689258 82692066 -167995788 - L1PA15 LINE L1 0 6816 4065 237 65 0 0 chr2 82692066 82692097 -167995757 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 16370 219 34 15 chr2 82692097 82694437 -167993417 - L1PA15 LINE L1 -2751 4065 1569 333 0 0 0 chr2 82694437 82694474 -167993380 + (TG)n Simple_repeat Simple_repeat 2 38 0 16370 219 34 15 chr2 82694474 82694839 -167993015 - L1PA15 LINE L1 -5247 1569 1213 3728 240 204 15 chr2 82694843 82696846 -167991008 - L1M3c LINE L1 -4573 2464 1 1550 199 0 17 chr2 82700668 82700959 -167986895 + AluJo SINE Alu 1 286 -26 1028 155 56 19 chr2 82701480 82701719 -167986135 + L1MA4 LINE L1 5937 6156 -144 201 121 42 61 chr2 82703065 82703230 -167984624 + (TAA)n Simple_repeat Simple_repeat 1 162 0 30 27 0 0 chr2 82703292 82703329 -167984525 + AT_rich Low_complexity Low_complexity 1 37 0 2753 49 3 0 chr2 82703329 82703654 -167984200 - LTR17 LTR ERV1 -454 326 1 2448 55 0 3 chr2 82703654 82703947 -167983907 - HERV17 LTR ERV1 0 8626 8335 277 51 0 0 chr2 82703937 82703976 -167983878 - HERV17 LTR ERV1 -1078 7548 7510 * 43932 61 5 6 chr2 82703969 82709390 -167978464 - HERV17 LTR ERV1 -2607 6019 605 417 121 15 0 chr2 82710877 82710943 -167976911 - MLT2A2 LTR ERVL -8 445 379 288 0 0 0 chr2 82711085 82711117 -167976737 + (T)n Simple_repeat Simple_repeat 1 32 0 6243 92 24 6 chr2 82711117 82711965 -167975889 - HERV17 LTR ERV1 -7763 863 1 4162 73 10 0 chr2 82711966 82712486 -167975368 - LTR17 LTR ERV1 -1 779 255 1212 263 39 9 chr2 82712861 82713192 -167974662 - MER58B DNA MER1_type 0 341 1 1274 194 16 0 chr2 82713205 82713458 -167974396 + L1MA4 LINE L1 6006 6262 -38 5689 172 12 11 chr2 82713924 82715089 -167972765 + L1MA4 LINE L1 5136 6300 0 210 224 0 41 chr2 82716841 82716890 -167970964 + T-rich Low_complexity Low_complexity 4 50 0 1723 130 7 30 chr2 82716892 82717161 -167970693 - AluSx SINE Alu -47 265 3 911 252 43 95 chr2 82717163 82717270 -167970584 + L1MC4a LINE L1 5354 5465 -2343 422 84 56 14 chr2 82717270 82717341 -167970513 + L1MC2 LINE L1 6262 6335 -9 911 252 43 95 chr2 82717341 82717697 -167970157 + L1MC4a LINE L1 5465 5793 -2015 578 235 83 34 chr2 82717710 82717914 -167969940 - MER46C DNA MER2_type -25 313 100 1848 192 48 120 chr2 82717944 82718611 -167969243 + MLT1E2 LTR MaLR 1 619 -7 1763 269 59 15 chr2 82718681 82719206 -167968648 - L1ME3A LINE L1 -5 6165 5618 423 259 102 10 chr2 82719256 82719453 -167968401 + L1MC4a LINE L1 5797 6011 -1797 210 71 0 0 chr2 82719531 82719559 -167968295 + (CA)n Simple_repeat Simple_repeat 2 29 0 239 177 16 0 chr2 82719566 82719628 -167968226 + (TA)n Simple_repeat Simple_repeat 2 64 0 238 222 0 95 chr2 82719824 82719887 -167967967 - MIR3 SINE MIR -49 159 103 1332 242 61 86 chr2 82720955 82721476 -167966378 + MLT1E2 LTR MaLR 11 482 -144 2135 118 17 0 chr2 82721476 82721765 -167966089 - AluSc SINE Alu -15 294 1 1332 242 61 86 chr2 82721765 82721906 -167965948 + MLT1E2 LTR MaLR 482 625 -1 2526 139 53 17 chr2 82722102 82722519 -167965335 - MSTB1 LTR MaLR 0 432 1 228 341 33 22 chr2 82722538 82722629 -167965225 + L2 LINE L2 3171 3262 -10 757 226 183 43 chr2 82722863 82722935 -167964919 - MER2 DNA MER2_type 0 344 283 2316 77 0 39 chr2 82722935 82723246 -167964608 + AluY SINE Alu 1 299 -12 757 226 183 43 chr2 82723246 82723474 -167964380 - MER2 DNA MER2_type -61 283 2 23 0 0 0 chr2 82723474 82723497 -167964357 + AT_rich Low_complexity Low_complexity 1 23 0 296 309 34 34 chr2 82723894 82724072 -167963782 - HAL1b LINE L1 -821 527 350 189 74 0 0 chr2 82724158 82724185 -167963669 + (T)n Simple_repeat Simple_repeat 1 27 0 293 145 16 0 chr2 82724436 82724498 -167963356 + GA-rich Low_complexity Low_complexity 2 64 0 325 196 52 21 chr2 82725488 82725585 -167962269 + L1MC5 LINE L1 7830 7929 -32 886 117 0 0 chr2 82729358 82729500 -167958354 - AluSg/x SINE Alu 0 334 193 340 135 338 0 chr2 82729500 82729574 -167958280 - AluSc SINE Alu -51 248 150 338 336 17 25 chr2 82731060 82731179 -167956675 + L2 LINE L2 3151 3268 -4 391 259 51 13 chr2 82731359 82731595 -167956259 - L1M4 LINE L1 -2840 3306 3062 971 207 44 60 chr2 82731750 82732110 -167955744 - MER67C LTR ERV1 -244 270 12 399 206 130 0 chr2 82732119 82732265 -167955589 - L1M4 LINE L1 -3106 3040 2876 1742 246 63 66 chr2 82733689 82734413 -167953441 - MER72 LTR ERV1 0 722 1 23 0 0 0 chr2 82734795 82734818 -167953036 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 82734963 82734989 -167952865 + AT_rich Low_complexity Low_complexity 1 26 0 1810 206 9 0 chr2 82735386 82735731 -167952123 + MER7A DNA MER2_type 1 346 0 667 195 16 0 chr2 82735944 82736072 -167951782 + MIR SINE MIR 112 241 -21 331 274 21 0 chr2 82737497 82737592 -167950262 + LTR65 LTR ERV1 567 663 -6 2215 97 10 0 chr2 82738057 82738355 -167949499 - AluSg SINE Alu -9 301 1 559 162 68 68 chr2 82738464 82738699 -167949155 + LTR37A LTR ERV1 192 426 0 851 182 24 4 chr2 82739284 82739695 -167948159 - MER89 LTR ERV1 0 559 5 2168 125 0 0 chr2 82739891 82740195 -167947659 - AluSc SINE Alu -5 304 1 221 349 12 0 chr2 82740198 82740284 -167947570 - MIR SINE MIR -102 160 74 181 283 54 43 chr2 82740804 82740896 -167946958 - L2 LINE L2 0 3313 3221 1287 188 120 10 chr2 82740932 82741315 -167946539 - LTR37A LTR ERV1 0 426 2 207 69 0 0 chr2 82741537 82741566 -167946288 + (TTG)n Simple_repeat Simple_repeat 2 30 0 879 166 0 0 chr2 82741755 82741906 -167945948 - MLT1A2 LTR MaLR -5 369 219 435 107 0 0 chr2 82741912 82741968 -167945886 - FLAM_A SINE Alu -55 77 22 210 91 0 0 chr2 82742143 82742176 -167945678 + (GA)n Simple_repeat Simple_repeat 2 34 0 2037 111 3 7 chr2 82742245 82742534 -167945320 + AluSx SINE Alu 21 308 -4 4834 139 175 74 chr2 82742534 82743901 -167943953 - MER4A-int LTR ERV1 -5093 1505 1 2442 137 7 10 chr2 82743904 82744307 -167943547 - MER4A LTR ERV1 0 664 263 608 141 0 10 chr2 82744307 82744406 -167943448 - MER4A LTR ERV1 -566 98 1 1026 166 0 0 chr2 82744453 82744610 -167943244 - FRAM SINE Alu 0 40 1 219 36 0 0 chr2 82744850 82744878 -167942976 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 770 201 210 15 chr2 82745416 82745749 -167942105 - LTR37A LTR ERV1 -2 424 27 510 304 12 19 chr2 82746210 82746371 -167941483 - MIR3 SINE MIR -1 207 48 411 289 117 64 chr2 82746677 82746713 -167941141 + MLT1G LTR MaLR 10 43 -547 1018 218 15 111 chr2 82746713 82747117 -167940737 - MLT1A1 LTR MaLR 0 365 1 411 289 117 64 chr2 82747117 82747440 -167940414 + MLT1G LTR MaLR 43 388 -202 293 236 14 0 chr2 82747501 82747573 -167940281 + MLT1G LTR MaLR 523 595 0 185 231 96 0 chr2 82747969 82748021 -167939833 - MIR SINE MIR -64 144 88 418 306 12 24 chr2 82750051 82750221 -167937633 + MER92C LTR ERV1 12 179 -375 292 190 0 0 chr2 82750307 82750365 -167937489 + MER92C LTR ERV1 495 552 -2 243 313 38 12 chr2 82750628 82750708 -167937146 + MIR SINE MIR 20 101 -107 26 0 0 0 chr2 82750908 82750934 -167936920 + AT_rich Low_complexity Low_complexity 1 26 0 316 335 142 23 chr2 82750951 82751127 -167936727 + L3 LINE CR1 328 524 -1053 916 134 0 15 chr2 82751154 82751288 -167936566 + FLAM_C SINE Alu 1 132 -11 33 0 0 0 chr2 82751288 82751321 -167936533 + AT_rich Low_complexity Low_complexity 1 33 0 728 200 55 34 chr2 82751334 82751701 -167936153 + LTR37A LTR ERV1 6 424 -2 587 215 71 35 chr2 82751707 82752076 -167935778 + MER110 LTR ERV1 1 468 -23 243 0 0 0 chr2 82752209 82752236 -167935618 + (TG)n Simple_repeat Simple_repeat 2 28 0 246 256 26 26 chr2 82753385 82753463 -167934391 + L1MCb LINE L1 708 785 -5260 2749 78 92 5 chr2 82753466 82753878 -167933976 - LTR7 LTR ERV1 -2 448 1 1688 108 14 15 chr2 82753878 82754231 -167933623 - HERVH LTR ERV1 0 7713 7324 1376 116 19 0 chr2 82754231 82754447 -167933407 - HERVH LTR ERV1 -1894 5819 5600 7293 125 11 4 chr2 82754448 82756153 -167931701 - HERVH LTR ERV1 -2564 5149 3500 * 17716 95 66 61 chr2 82756152 82759427 -167928427 - HERVH LTR ERV1 -4423 3290 1 2581 73 128 5 chr2 82759429 82759828 -167928026 - LTR7 LTR ERV1 -2 448 1 413 219 32 0 chr2 82759833 82759956 -167927898 + L1MCb LINE L1 787 913 -5132 234 313 102 47 chr2 82759958 82760086 -167927768 + L2 LINE L2 3137 3271 -1 351 0 0 0 chr2 82760432 82760471 -167927383 + (TG)n Simple_repeat Simple_repeat 2 40 0 901 138 0 0 chr2 82760472 82760602 -167927252 - FLAM_C SINE Alu -2 131 2 492 250 70 59 chr2 82761019 82761391 -167926463 - L1ME4a LINE L1 -38 6083 5708 833 186 16 6 chr2 82761455 82761638 -167926216 + MER3 DNA MER1_type 14 198 -11 315 203 0 0 chr2 82762273 82762342 -167925512 + (TATATG)n Simple_repeat Simple_repeat 2 70 0 1483 180 26 26 chr2 82763262 82763568 -167924286 - AluJo SINE Alu -5 307 2 21 0 0 0 chr2 82763722 82763743 -167924111 + AT_rich Low_complexity Low_complexity 1 21 0 278 280 27 0 chr2 82764754 82764829 -167923025 + CT-rich Low_complexity Low_complexity 3 79 0 1460 194 18 83 chr2 82764831 82764986 -167922868 + MLT1A1 LTR MaLR 4 167 -198 1492 188 7 49 chr2 82764986 82765290 -167922564 + AluJo SINE Alu 1 291 -21 1460 194 18 83 chr2 82765290 82765521 -167922333 + MLT1A1 LTR MaLR 167 365 0 218 343 139 9 chr2 82765954 82766062 -167921792 + MER5A DNA MER1_type 46 167 -22 209 316 128 26 chr2 82765963 82766080 -167921774 - MER5A DNA MER1_type -45 144 16 * 186 103 0 0 chr2 82766267 82766296 -167921558 + (TATATG)n Simple_repeat Simple_repeat 2 30 0 370 272 15 72 chr2 82766711 82766906 -167920948 - L1ME2 LINE L1 -15 6149 5966 36 0 0 0 chr2 82766906 82766942 -167920912 + AT_rich Low_complexity Low_complexity 1 36 0 1396 257 26 37 chr2 82766942 82767479 -167920375 - L1ME2 LINE L1 -208 5956 5426 727 278 0 0 chr2 82768404 82768577 -167919277 + MIR SINE MIR 90 262 0 1399 127 37 4 chr2 82769632 82769876 -167917978 - Tigger1 DNA MER2_type 0 2418 2167 4811 176 20 11 chr2 82769882 82771362 -167916492 - L1PA16 LINE L1 -9 6157 4670 2462 87 22 25 chr2 82771363 82771719 -167916135 + THE1A LTR MaLR 1 355 0 11076 98 6 1 chr2 82771719 82773286 -167914568 + THE1A-int LTR MaLR 1 1574 -6 2253 132 3 25 chr2 82773291 82773654 -167914200 + THE1A LTR MaLR 1 355 0 7101 249 24 15 chr2 82773676 82777536 -167910318 - L1PA12 LINE L1 -1487 6097 2182 1412 217 7 7 chr2 82778271 82778548 -167909306 - AluJo SINE Alu -30 282 6 11638 156 22 19 chr2 82778552 82780726 -167907128 - Tigger1 DNA MER2_type -237 2181 1 1285 109 11 0 chr2 82781075 82781259 -167906595 - L1PA10 LINE L1 -4 6164 5979 2920 135 3 120 chr2 82781259 82781588 -167906266 + L1P LINE L1 4668 4949 -1197 371 145 0 0 chr2 82781588 82781657 -167906197 + AluS SINE Alu 232 300 0 2920 135 3 120 chr2 82781657 82781957 -167905897 + L1P LINE L1 4949 5283 -863 1994 119 88 0 chr2 82782039 82782324 -167905530 - AluSp SINE Alu -2 311 2 2172 118 29 12 chr2 82782334 82782680 -167905174 - L1PA15 LINE L1 0 6165 5814 421 366 16 0 chr2 82782733 82782916 -167904938 + L3 LINE CR1 445 630 -947 200 380 66 0 chr2 82783275 82783412 -167904442 - MIR SINE MIR -1 261 116 639 365 76 12 chr2 82783525 82783931 -167903923 + L3 LINE CR1 1100 1531 -46 2272 64 0 4 chr2 82784002 82784322 -167903532 - AluY SINE Alu 0 320 2 1511 222 3 0 chr2 82784802 82785086 -167902768 + AluJo SINE Alu 1 285 -27 225 0 0 0 chr2 82785086 82785111 -167902743 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 324 0 0 0 chr2 82785110 82785146 -167902708 + (CA)n Simple_repeat Simple_repeat 2 37 0 377 314 88 68 chr2 82785616 82785970 -167901884 - L2 LINE L2 0 3272 2912 363 328 17 0 chr2 82786764 82786880 -167900974 + L2 LINE L2 3196 3313 0 2299 123 0 0 chr2 82786929 82787237 -167900617 + AluSq SINE Alu 1 308 -5 1891 161 3 0 chr2 82787285 82787576 -167900278 + AluSx SINE Alu 1 292 -20 427 284 116 47 chr2 82788198 82788388 -167899466 + MIR3 SINE MIR 1 203 -5 1518 200 98 22 chr2 82789777 82790177 -167897677 + MLT1D LTR MaLR 76 505 0 1170 167 39 23 chr2 82790378 82790683 -167897171 - MER33 DNA MER1_type -22 302 1 572 259 141 27 chr2 82791130 82791350 -167896504 + MIR SINE MIR 17 261 -1 21 36 0 0 chr2 82792583 82792611 -167895243 + AT_rich Low_complexity Low_complexity 1 28 0 185 333 167 0 chr2 82792611 82792701 -167895153 + MIR SINE MIR 17 121 -87 1297 245 110 31 chr2 82793502 82794014 -167893840 + MLT1F1 LTR MaLR 1 551 -16 25 65 0 0 chr2 82794444 82794490 -167893364 + AT_rich Low_complexity Low_complexity 1 46 0 300 296 61 17 chr2 82795191 82795306 -167892548 + MIR3 SINE MIR 84 203 -5 381 351 74 29 chr2 82795976 82796218 -167891636 + L3 LINE CR1 1240 1492 -85 2440 129 51 10 chr2 82796380 82796791 -167891063 + MSTA LTR MaLR 1 428 0 184 205 51 0 chr2 82797173 82797212 -167890642 - MER5B DNA MER1_type -131 47 7 359 264 34 47 chr2 82798103 82798251 -167889603 + MIR SINE MIR 111 256 -6 222 235 20 0 chr2 82798524 82798575 -167889279 + L2 LINE L2 3221 3272 0 435 273 100 49 chr2 82798785 82799040 -167888814 + MIR SINE MIR 1 261 -1 308 280 88 26 chr2 82799104 82799297 -167888557 + L1MC5 LINE L1 7732 7936 -25 1336 198 105 62 chr2 82799881 82800320 -167887534 - MLT1C LTR MaLR -6 461 4 238 333 77 43 chr2 82800356 82800563 -167887291 + MIR SINE MIR 3 216 -46 1342 135 0 14 chr2 82802408 82802630 -167885224 + LTR1 LTR ERV1 567 785 0 297 172 0 0 chr2 82805696 82805760 -167882094 + (TG)n Simple_repeat Simple_repeat 1 64 0 288 154 0 0 chr2 82806199 82806251 -167881603 + T-rich Low_complexity Low_complexity 1 52 0 385 264 0 22 chr2 82807259 82807350 -167880504 - L2 LINE L2 -27 3286 3198 222 348 159 50 chr2 82807564 82807893 -167879961 + L2 LINE L2 360 651 -2663 243 0 0 0 chr2 82807893 82807920 -167879934 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 222 348 159 50 chr2 82807920 82808355 -167879499 + L2 LINE L2 651 1208 -2106 188 61 61 0 chr2 82808377 82808410 -167879444 + (TCTA)n Simple_repeat Simple_repeat 1 35 0 2040 189 36 10 chr2 82808662 82809074 -167878780 - MSTB LTR MaLR 0 426 4 321 331 87 36 chr2 82809139 82809474 -167878380 + L2 LINE L2 2046 2397 -917 857 144 72 0 chr2 82810517 82810684 -167877170 - L1MC2 LINE L1 -8 6336 6158 1183 169 59 62 chr2 82810687 82811007 -167876847 - L1MC2 LINE L1 -243 6101 5783 401 362 43 20 chr2 82811321 82811575 -167876279 + L2 LINE L2 2580 2839 -475 1954 133 0 14 chr2 82812427 82812759 -167875095 + AluSx SINE Alu 1 328 0 192 303 22 45 chr2 82813327 82813416 -167874438 - MIR SINE MIR -6 256 170 436 277 26 56 chr2 82813418 82813613 -167874241 - MIR SINE MIR 0 262 74 4424 186 8 38 chr2 82814001 82814917 -167872937 + MER54A LTR ERVL 14 901 0 180 179 0 0 chr2 82815834 82815873 -167871981 + (CA)n Simple_repeat Simple_repeat 2 40 0 331 284 23 0 chr2 82815916 82816004 -167871850 + L1MC4 LINE L1 6614 6703 -1339 * 362 253 46 0 chr2 82815926 82816013 -167871841 - L1MC4 LINE L1 -1339 6703 6613 1776 182 95 19 chr2 82816175 82816210 -167871644 + L1MA8 LINE L1 5795 5826 -465 2324 73 0 16 chr2 82816210 82816513 -167871341 + AluY SINE Alu 1 298 -13 1776 182 95 19 chr2 82816513 82816939 -167870915 + L1MA8 LINE L1 5826 6291 0 373 305 111 19 chr2 82817134 82817459 -167870395 - L1ME LINE L1 -558 5612 5258 732 97 9 0 chr2 82817554 82817667 -167870187 - L1MA5A LINE L1 -3 6294 6181 1250 199 67 67 chr2 82819094 82819466 -167868388 - MLT1B LTR MaLR -18 372 1 969 218 5 0 chr2 82820221 82820409 -167867445 + MER5A DNA MER1_type 1 189 0 251 354 0 0 chr2 82820504 82820586 -167867268 - L2 LINE L2 0 3313 3232 315 151 0 0 chr2 82820589 82820642 -167867212 + AluJb SINE Alu 72 124 -178 22 35 0 0 chr2 82820646 82820675 -167867179 + AT_rich Low_complexity Low_complexity 1 29 0 1022 207 81 29 chr2 82820795 82820817 -167867037 + MSTD LTR MaLR 1 20 -376 2420 173 19 12 chr2 82820817 82821239 -167866615 + MSTB LTR MaLR 1 425 -1 1022 207 81 29 chr2 82821239 82821560 -167866294 + MSTD LTR MaLR 20 388 -8 26 30 0 0 chr2 82822060 82822093 -167865761 + AT_rich Low_complexity Low_complexity 1 33 0 247 386 124 13 chr2 82823373 82823671 -167864183 + L3 LINE CR1 348 678 -899 1017 319 87 5 chr2 82823742 82824191 -167863663 + LTR16C LTR ERVL 4 489 -2 1930 177 3 0 chr2 82824873 82825218 -167862636 - MLT1A1 LTR MaLR -19 346 1 864 348 43 25 chr2 82825323 82825993 -167861861 + HERV16 LTR ERVL 886 1567 -3429 1981 199 50 19 chr2 82825994 82826472 -167861382 + MER21B LTR ERV1 360 852 -11 299 324 55 55 chr2 82827052 82827234 -167860620 + MER5A DNA MER1_type 8 189 0 340 338 100 41 chr2 82827237 82827506 -167860348 + L2 LINE L2 2953 3237 -35 296 176 29 0 chr2 82827810 82827878 -167859976 + L1MB7 LINE L1 6104 6173 -11 324 302 9 26 chr2 82829687 82829803 -167858051 - MIR SINE MIR 0 262 149 193 311 94 38 chr2 82830161 82830267 -167857587 - L2 LINE L2 -18 3295 3184 408 252 61 9 chr2 82830824 82830939 -167856915 - MIR SINE MIR -32 230 110 3486 113 4 6 chr2 82830966 82831480 -167856374 + MER75 DNA T2_type 2 514 0 215 263 32 84 chr2 82831862 82831957 -167855897 - MIR SINE MIR -56 152 63 428 290 42 42 chr2 82832236 82832429 -167855425 - L1ME4a LINE L1 -178 5943 5751 25 51 0 0 chr2 82833251 82833290 -167854564 + AT_rich Low_complexity Low_complexity 1 39 0 695 305 114 41 chr2 82833384 82833823 -167854031 - L2 LINE L2 -1 3312 2842 510 304 38 61 chr2 82833925 82834270 -167853584 - L1M4 LINE L1 -3556 2590 2254 208 308 0 0 chr2 82834572 82834624 -167853230 + (CA)n Simple_repeat Simple_repeat 1 52 0 419 293 140 7 chr2 82835227 82835377 -167852477 - MIR SINE MIR -73 189 20 297 0 0 0 chr2 82838266 82838299 -167849555 + (TG)n Simple_repeat Simple_repeat 2 34 0 384 22 0 0 chr2 82838300 82838345 -167849509 + (GA)n Simple_repeat Simple_repeat 2 46 0 197 286 29 0 chr2 82839764 82839834 -167848020 - MIR SINE MIR -121 141 70 40860 36 23 0 chr2 82839899 82845913 -167841941 - L1PA3 LINE L1 0 6155 4 324 251 110 48 chr2 82845953 82846180 -167841674 - MLT1G3 LTR MaLR 0 542 302 254 125 21 0 chr2 82846206 82846254 -167841600 + CT-rich Low_complexity Low_complexity 2 50 0 443 302 41 41 chr2 82846254 82846509 -167841345 - MLT1G3 LTR MaLR -294 296 7 189 0 0 0 chr2 82846927 82846948 -167840906 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 1935 131 52 0 chr2 82847121 82847412 -167840442 + AluSg SINE Alu 1 306 -4 433 331 50 0 chr2 82847485 82847645 -167840209 + MIR SINE MIR 8 175 -87 429 255 0 0 chr2 82847696 82847794 -167840060 - MER96 DNA MER1_type? -77 98 1 4007 134 26 20 chr2 82848047 82848660 -167839194 - L1MA5A LINE L1 -351 5946 5308 2032 138 0 3 chr2 82848660 82848958 -167838896 - AluSq SINE Alu -16 297 1 4007 134 26 20 chr2 82848958 82849346 -167838508 - L1MA5A LINE L1 -989 5308 4924 311 314 94 21 chr2 82849380 82849571 -167838283 - L1 LINE L1 -1009 5137 4933 272 339 75 3 chr2 82849647 82849939 -167837915 - L1 LINE L1 -1302 4844 4532 2071 164 41 59 chr2 82849940 82850451 -167837403 - LTR54 LTR ERV1 -1 509 8 925 322 89 25 chr2 82850466 82851075 -167836779 - L1 LINE L1 -1624 4522 3875 2607 36 0 0 chr2 82851740 82852043 -167835811 + AluY SINE Alu 1 303 -8 1522 177 39 58 chr2 82852511 82852821 -167835033 - AluJo SINE Alu -8 304 1 271 267 33 0 chr2 82853060 82853120 -167834734 - L2 LINE L2 0 3313 3252 712 289 93 9 chr2 82853973 82854198 -167833656 - MIR SINE MIR -2 260 17 216 305 0 0 chr2 82855687 82855746 -167832108 + CT-rich Low_complexity Low_complexity 2 60 0 2726 222 18 22 chr2 82855840 82856557 -167831297 - L1MB8 LINE L1 -1 6177 5464 4825 219 56 16 chr2 82856559 82858045 -167829809 - L1MB8 LINE L1 -951 5195 3625 219 211 39 0 chr2 82858785 82858837 -167829017 + (CATA)n Simple_repeat Simple_repeat 2 55 0 906 224 39 0 chr2 82859264 82859469 -167828385 + MER58A DNA MER1_type 11 223 -1 226 129 229 43 chr2 82859939 82860009 -167827845 - MLT1J2 LTR MaLR -306 144 62 216 0 0 0 chr2 82860873 82860897 -167826957 + (T)n Simple_repeat Simple_repeat 1 24 0 481 264 113 59 chr2 82861677 82861916 -167825938 - MIR SINE MIR 0 262 11 294 167 0 0 chr2 82862406 82862466 -167825388 + (CA)n Simple_repeat Simple_repeat 1 60 0 264 280 84 19 chr2 82863352 82863459 -167824395 - MIR SINE MIR -64 144 31 267 286 5 0 chr2 82863971 82864043 -167823811 - MIR SINE MIR -70 138 64 208 111 44 0 chr2 82864140 82864185 -167823669 + A-rich Low_complexity Low_complexity 1 47 0 257 301 95 82 chr2 82864287 82864675 -167823179 + MLT1L LTR MaLR 174 566 -49 1869 159 78 50 chr2 82864729 82865151 -167822703 - MER74C LTR ERVL -12 448 15 22 0 0 0 chr2 82865156 82865178 -167822676 + AT_rich Low_complexity Low_complexity 1 22 0 255 57 0 57 chr2 82865325 82865378 -167822476 + (CA)n Simple_repeat Simple_repeat 1 50 0 208 200 40 0 chr2 82866691 82866741 -167821113 + (TTCA)n Simple_repeat Simple_repeat 3 54 0 189 347 82 14 chr2 82867538 82867685 -167820169 + MIR SINE MIR 12 168 -94 226 350 80 0 chr2 82869020 82869120 -167818734 + MIR SINE MIR 40 147 -115 192 135 0 0 chr2 82869191 82869228 -167818626 + (ATG)n Simple_repeat Simple_repeat 3 39 0 1519 232 54 22 chr2 82869340 82869788 -167818066 - MLT1C LTR MaLR 0 467 6 2632 96 8 11 chr2 82871160 82871525 -167816329 + THE1B LTR MaLR 1 364 0 1667 146 7 0 chr2 82874555 82874843 -167813011 - L1MA5 LINE L1 -2 6298 6009 307 317 30 10 chr2 82874851 82874952 -167812902 - MIR SINE MIR -128 134 32 206 250 14 0 chr2 82875205 82875277 -167812577 + GA-rich Low_complexity Low_complexity 2 74 0 270 313 118 72 chr2 82875866 82876061 -167811793 - MIR3 SINE MIR -4 204 1 232 306 45 9 chr2 82877588 82877699 -167810155 + LTR67 LTR ERVL 430 544 -13 598 145 23 23 chr2 82877946 82878077 -167809777 + L1P LINE L1 5276 5406 -760 566 112 82 0 chr2 82878093 82878191 -167809663 + L1PA16 LINE L1 6057 6162 -4 263 317 0 12 chr2 82878199 82878281 -167809573 + MIR SINE MIR 66 146 -116 461 261 98 33 chr2 82878289 82878473 -167809381 - L2 LINE L2 0 3313 3118 2219 105 7 7 chr2 82878575 82878869 -167808985 + AluSx SINE Alu 1 294 -18 885 335 156 29 chr2 82878937 82879162 -167808692 - L2 LINE L2 -338 2976 2781 708 54 0 0 chr2 82879162 82879255 -167808599 + (TTC)n Simple_repeat Simple_repeat 1 93 0 885 335 156 29 chr2 82879255 82879974 -167807880 - L2 LINE L2 -533 2781 1912 377 302 9 0 chr2 82880216 82880322 -167807532 - MIR SINE MIR -65 143 37 332 340 60 25 chr2 82880575 82880775 -167807079 + L3 LINE CR1 1029 1235 -342 2402 55 10 10 chr2 82881160 82881471 -167806383 + AluY SINE Alu 1 311 0 426 292 125 28 chr2 82881590 82881806 -167806048 - MIR SINE MIR -15 247 11 224 348 0 14 chr2 82882040 82882109 -167805745 + MIR SINE MIR 9 76 -186 1538 272 67 12 chr2 82882110 82882602 -167805252 + LTR40a LTR ERVL 1 519 0 407 317 12 12 chr2 82882897 82883058 -167804796 + MER117 DNA MER1_type 30 190 -7 347 235 161 32 chr2 82883576 82883861 -167803993 + L1ME4a LINE L1 5563 5884 -237 324 0 0 0 chr2 82884331 82884367 -167803487 + (TTA)n Simple_repeat Simple_repeat 2 37 0 220 311 14 14 chr2 82885338 82885412 -167802442 + MIR SINE MIR 64 137 -125 284 81 81 0 chr2 82885412 82885499 -167802355 + (TA)n Simple_repeat Simple_repeat 1 94 0 1782 144 6 34 chr2 82886287 82886607 -167801247 - AluSq SINE Alu -2 311 1 699 211 23 12 chr2 82887525 82887696 -167800158 + L1PA16 LINE L1 5974 6146 -20 24 53 0 0 chr2 82887696 82887734 -167800120 + AT_rich Low_complexity Low_complexity 1 38 0 703 300 36 4 chr2 82887869 82888116 -167799738 + MIR SINE MIR 8 262 0 288 348 59 0 chr2 82888835 82888953 -167798901 - MIR SINE MIR -71 191 67 199 330 180 10 chr2 82889978 82890078 -167797776 + MER5A DNA MER1_type 72 188 -1 1755 52 5 0 chr2 82890492 82890702 -167797152 + AluY SINE Alu 97 307 -4 4792 176 9 15 chr2 82890751 82892025 -167795829 - L1PB4 LINE L1 -15 6844 5579 4096 163 32 8 chr2 82892035 82892825 -167795029 - L1PA16 LINE L1 -6 6160 5352 * 4559 239 90 12 chr2 82892822 82893362 -167794492 - L1PB4 LINE L1 -2629 4220 3723 2218 119 96 10 chr2 82893362 82893756 -167794098 - MSTA LTR MaLR 0 428 1 4559 239 90 12 chr2 82893756 82895239 -167792615 - L1PB4 LINE L1 -3126 3723 1890 705 349 57 11 chr2 82895234 82895586 -167792268 - L1PB4 LINE L1 -6419 420 53 * 1957 205 7 0 chr2 82895617 82896051 -167791803 - L1 LINE L1 -1279 4867 4431 * 3508 201 22 19 chr2 82896049 82897084 -167790770 - L1MB5 LINE L1 -15 6159 5123 506 286 45 46 chr2 82897523 82897647 -167790207 + L1M4c LINE L1 969 1092 -5290 1750 201 10 7 chr2 82897647 82897946 -167789908 + AluJo SINE Alu 1 300 -12 506 286 45 46 chr2 82897946 82898408 -167789446 + L1M4c LINE L1 1092 1670 -4712 2273 126 0 0 chr2 82898793 82899102 -167788752 - AluSq SINE Alu -4 309 1 478 252 17 34 chr2 82899348 82899467 -167788387 - MIR SINE MIR -62 146 30 205 312 167 29 chr2 82900249 82900387 -167787467 - MIR3 SINE MIR -23 185 29 322 242 258 6 chr2 82900419 82900601 -167787253 + Charlie1 DNA MER1_type 13 109 -2652 * 532 173 39 8 chr2 82900591 82900718 -167787136 + Charlie1 DNA MER1_type 2629 2759 -2 3161 91 16 9 chr2 82902196 82902637 -167785217 - MLT2A1 LTR ERVL 0 444 1 552 133 29 0 chr2 82902912 82903017 -167784837 - L1MA8 LINE L1 -4 6287 6180 832 286 115 27 chr2 82903163 82903537 -167784317 + MLT1I LTR MaLR 1 407 -2 345 288 63 9 chr2 82903563 82903674 -167784180 + MIR SINE MIR 1 117 -145 1233 249 40 11 chr2 82903683 82904032 -167783822 - MLT1A2 LTR MaLR -12 362 4 207 301 60 0 chr2 82904052 82904135 -167783719 + MIR SINE MIR 162 249 -13 2222 114 7 7 chr2 82905597 82905903 -167781951 + AluSx SINE Alu 1 306 -6 1674 161 31 47 chr2 82905943 82906260 -167781594 + AluJo SINE Alu 1 312 0 876 252 154 24 chr2 82907421 82907550 -167780304 - L2 LINE L2 -150 3163 3052 1492 178 20 94 chr2 82907550 82907954 -167779900 + MLT1A2 LTR MaLR 1 374 0 876 252 154 24 chr2 82907954 82908299 -167779555 - L2 LINE L2 -261 3052 2597 296 257 115 35 chr2 82908387 82908500 -167779354 - MIR SINE MIR -16 246 125 488 261 26 39 chr2 82908503 82908656 -167779198 + MIR SINE MIR 112 262 0 219 69 0 0 chr2 82909499 82909528 -167778326 + (TTG)n Simple_repeat Simple_repeat 2 30 0 320 351 74 14 chr2 82910854 82911002 -167776852 - MIR3 SINE MIR -21 187 31 299 282 64 27 chr2 82912271 82912381 -167775473 - MER81 DNA DNA 0 114 1 207 341 12 12 chr2 82912384 82912469 -167775385 - MER5A DNA MER1_type -71 118 34 192 281 91 83 chr2 82912615 82912736 -167775118 - MER5B DNA MER1_type 0 178 57 516 291 57 38 chr2 82914335 82914545 -167773309 - MIR SINE MIR -21 241 28 228 67 0 0 chr2 82914754 82914784 -167773070 + (CAG)n Simple_repeat Simple_repeat 1 30 0 294 351 144 15 chr2 82915789 82915991 -167771863 + MIR SINE MIR 20 247 -15 201 39 0 0 chr2 82917050 82917076 -167770778 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 5951 34 0 0 chr2 82917091 82917803 -167770051 - L1PA4 LINE L1 -4 6151 5440 1421 241 37 81 chr2 82918055 82918598 -167769256 + LTR40a LTR ERVL 1 519 0 258 226 82 63 chr2 82919790 82919949 -167767905 - L1ME4a LINE L1 -191 5930 5769 196 265 31 61 chr2 82920105 82920203 -167767651 + L2 LINE L2 3219 3313 0 23 0 0 0 chr2 82920395 82920418 -167767436 + AT_rich Low_complexity Low_complexity 1 23 0 398 274 9 9 chr2 82921370 82921476 -167766378 - L2 LINE L2 0 3313 3208 25 0 0 0 chr2 82922199 82922224 -167765630 + AT_rich Low_complexity Low_complexity 1 25 0 516 291 50 30 chr2 82923857 82924056 -167763798 + MIR SINE MIR 60 262 0 317 363 52 0 chr2 82925154 82925289 -167762565 - MIR SINE MIR -16 246 105 23 78 0 0 chr2 82925491 82925542 -167762312 + AT_rich Low_complexity Low_complexity 1 51 0 589 337 99 0 chr2 82925924 82926227 -167761627 - MLT1I LTR MaLR -45 364 32 215 394 85 12 chr2 82926979 82927144 -167760710 - MIR SINE MIR -83 179 3 207 0 0 0 chr2 82928365 82928388 -167759466 + (A)n Simple_repeat Simple_repeat 1 23 0 299 294 128 0 chr2 82928549 82928651 -167759203 + L2 LINE L2 3199 3313 0 1696 188 10 16 chr2 82928751 82929060 -167758794 + AluJb SINE Alu 1 307 -5 403 249 82 46 chr2 82930712 82930888 -167756966 - MER5A DNA MER1_type -1 177 1 723 177 102 0 chr2 82931180 82931327 -167756527 - MER5B DNA MER1_type 0 178 17 2277 91 0 0 chr2 82931374 82931670 -167756184 - AluY SINE Alu -15 296 1 2137 129 7 0 chr2 82931691 82931986 -167755868 + AluSq SINE Alu 1 297 -16 451 211 144 11 chr2 82932041 82932197 -167755657 - MER5A DNA MER1_type -6 183 4 584 221 76 0 chr2 82932237 82932368 -167755486 + MER5A DNA MER1_type 49 189 0 220 292 56 0 chr2 82932602 82932674 -167755180 + MIR3 SINE MIR 133 208 0 1063 160 28 0 chr2 82933233 82933414 -167754440 - MER20 DNA MER1_type -33 186 1 183 300 0 0 chr2 82933457 82933497 -167754357 - MER5A DNA MER1_type 0 189 150 1393 216 0 6 chr2 82933498 82933817 -167754037 + L1M4 LINE L1 5333 5649 -535 1112 213 76 53 chr2 82934814 82935171 -167752683 + MLT1A1 LTR MaLR 1 365 0 183 365 167 8 chr2 82936036 82936162 -167751692 + L3 LINE CR1 967 1112 -465 1912 246 60 10 chr2 82937029 82937549 -167750305 - MLT1H1 LTR MaLR -9 546 1 850 228 44 5 chr2 82938030 82938236 -167749618 - MER20 DNA MER1_type -5 214 1 1624 122 0 0 chr2 82938357 82938579 -167749275 - AluSg/x SINE Alu -17 295 74 601 282 97 5 chr2 82939799 82939994 -167747860 - MIR SINE MIR -48 214 2 793 203 48 88 chr2 82940633 82940963 -167746891 + LTR37B LTR ERV1 3 319 -149 568 190 17 101 chr2 82940966 82941145 -167746709 - L1MC2 LINE L1 -31 6313 6150 275 144 240 68 chr2 82941148 82941294 -167746560 + LTR37B LTR ERV1 296 466 -2 266 242 0 0 chr2 82941297 82941359 -167746495 - MIR SINE MIR -133 129 68 2758 159 77 32 chr2 82941912 82942536 -167745318 + LTR8A LTR ERV1 76 727 0 21 0 0 0 chr2 82943851 82943872 -167743982 + AT_rich Low_complexity Low_complexity 1 21 0 255 125 0 0 chr2 82944088 82944128 -167743726 + (A)n Simple_repeat Simple_repeat 1 40 0 2390 163 21 2 chr2 82944909 82945327 -167742527 - MSTB LTR MaLR 0 426 1 759 243 101 78 chr2 82945350 82945774 -167742080 - MLT1H LTR MaLR 0 549 116 351 0 0 0 chr2 82946396 82946435 -167741419 + (TA)n Simple_repeat Simple_repeat 2 40 0 2143 280 14 77 chr2 82946440 82947168 -167740686 + L1MA5 LINE L1 5284 5965 -335 242 203 16 31 chr2 82947168 82947232 -167740622 + U7 snRNA snRNA 1 63 0 257 204 0 0 chr2 82947287 82947341 -167740513 + L1MA5 LINE L1 5955 6008 -283 316 351 119 0 chr2 82947345 82947513 -167740341 + MIR SINE MIR 57 244 -18 10300 36 0 1 chr2 82947645 82948964 -167738890 - L1PA3 LINE L1 -3133 3013 1696 19663 30 8 2 chr2 82948964 82952128 -167735726 + L1PA3 LINE L1 2999 6168 0 1024 361 26 44 chr2 82954534 82954666 -167733188 - MLT1E1 LTR MaLR -6 648 515 508 193 0 0 chr2 82954666 82954775 -167733079 + L1MA5 LINE L1 6188 6296 -4 1024 361 26 44 chr2 82954775 82954794 -167733060 - MLT1E1 LTR MaLR -139 515 497 2091 149 0 0 chr2 82954794 82955103 -167732751 + AluSx SINE Alu 1 309 -3 1024 361 26 44 chr2 82955103 82955496 -167732358 - MLT1E1 LTR MaLR -157 497 95 317 250 0 0 chr2 82955501 82955589 -167732265 + L1MB8 LINE L1 6091 6178 0 299 239 196 11 chr2 82955616 82955708 -167732146 - MLT1E1 LTR MaLR -484 109 1 624 334 81 26 chr2 82956533 82956961 -167730893 - L1MC/D LINE L1 -518 5660 5259 686 223 42 10 chr2 82956966 82957159 -167730695 + MER3 DNA MER1_type 6 204 -5 2388 229 46 28 chr2 82957375 82957827 -167730027 - L1M4c LINE L1 -2989 3655 3213 1491 193 53 3 chr2 82957827 82958149 -167729705 + MER44D DNA MER2_type 2 609 0 2388 229 46 28 chr2 82958149 82958634 -167729220 - L1M4c LINE L1 -3431 3213 2701 32 67 0 0 chr2 82958642 82958702 -167729152 + AT_rich Low_complexity Low_complexity 1 60 0 236 297 46 41 chr2 82958702 82959092 -167728762 - L1M4c LINE L1 -3967 2679 2288 37 0 0 0 chr2 82959156 82959193 -167728661 + AT_rich Low_complexity Low_complexity 1 37 0 644 135 0 36 chr2 82959237 82959348 -167728506 - L1MA1 LINE L1 -8 6294 6188 1568 254 66 16 chr2 82959360 82960083 -167727771 - L1M4c LINE L1 -4565 2079 1266 1994 103 9 23 chr2 82960091 82960626 -167727228 + MER4A LTR ERV1 1 664 0 2992 238 96 48 chr2 82960632 82961815 -167726039 - L1M4c LINE L1 -5288 1254 16 440 267 10 0 chr2 82961971 82962072 -167725782 + MER5A DNA MER1_type 16 117 -72 212 273 0 0 chr2 82962509 82962553 -167725301 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 1167 180 27 14 chr2 82962634 82962856 -167724998 + AluJo SINE Alu 87 311 -1 1481 172 26 0 chr2 82963121 82963424 -167724430 + L1MA4 LINE L1 5984 6294 -6 865 184 68 0 chr2 82963426 82963589 -167724265 + MER5A DNA MER1_type 16 189 0 2095 104 29 0 chr2 82964068 82964346 -167723508 + AluSq SINE Alu 19 304 -9 305 98 0 33 chr2 82964648 82964709 -167723145 + Alu SINE Alu 243 301 -1 1960 49 0 0 chr2 82965023 82965267 -167722587 + L1PA4 LINE L1 5911 6154 -1 224 54 54 0 chr2 82966293 82966330 -167721524 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr2 82966860 82966880 -167720974 + (T)n Simple_repeat Simple_repeat 1 20 0 1063 227 14 0 chr2 82966956 82967176 -167720678 - MER58A DNA MER1_type -1 223 1 397 333 7 28 chr2 82968156 82968300 -167719554 + MER5A DNA MER1_type 47 187 -2 1581 154 78 63 chr2 82968365 82968747 -167719107 + MLT1B LTR MaLR 1 388 -2 529 289 40 0 chr2 82968755 82968904 -167718950 + MIR SINE MIR 37 191 -71 1961 131 71 52 chr2 82968913 82969334 -167718520 - Tigger2a DNA MER2_type -5 429 1 23 0 0 0 chr2 82971003 82971026 -167716828 + AT_rich Low_complexity Low_complexity 1 23 0 202 239 0 0 chr2 82971699 82971745 -167716109 + A-rich Low_complexity Low_complexity 1 46 0 402 295 54 0 chr2 82972237 82972386 -167715468 + MLT1I LTR MaLR 241 397 -12 4846 56 3 0 chr2 82974345 82975014 -167712840 + L1PA8 LINE L1 5522 6192 0 23 68 0 0 chr2 82975071 82975115 -167712739 + AT_rich Low_complexity Low_complexity 1 44 0 522 0 0 0 chr2 82976075 82976133 -167711721 + (GA)n Simple_repeat Simple_repeat 1 58 0 405 348 27 59 chr2 82977519 82977596 -167710258 - L3 LINE CR1 -86 1491 1413 2278 77 7 7 chr2 82977596 82977893 -167709961 + AluY SINE Alu 1 297 -14 405 348 27 59 chr2 82977893 82978036 -167709818 - L3 LINE CR1 -164 1413 1278 2877 168 11 45 chr2 82978052 82978589 -167709265 - MLT2B1 LTR ERVL 0 520 2 257 325 13 0 chr2 82979244 82979321 -167708533 + MIR3 SINE MIR 115 192 -16 2721 201 14 8 chr2 82979552 82980144 -167707710 + L1MB7 LINE L1 5588 6182 -2 245 116 47 0 chr2 82980172 82980215 -167707639 - MER5A DNA MER1_type -77 112 68 935 237 16 0 chr2 82980247 82980433 -167707421 + MER5A DNA MER1_type 1 189 0 28 29 0 0 chr2 82980499 82980534 -167707320 + AT_rich Low_complexity Low_complexity 1 35 0 840 320 149 24 chr2 82981918 82982783 -167705071 + L2 LINE L2 2330 3313 0 2962 166 26 10 chr2 82983632 82984139 -167703715 - MLT2B1 LTR ERVL -5 515 1 248 286 12 36 chr2 82984279 82984363 -167703491 + MLT1E LTR MaLR 1 82 -511 342 0 0 0 chr2 82984443 82984481 -167703373 + (TC)n Simple_repeat Simple_repeat 2 39 0 923 226 95 64 chr2 82984515 82984811 -167703043 + MLT1E LTR MaLR 258 588 -5 288 352 28 28 chr2 82985881 82986023 -167701831 + MIR SINE MIR 50 191 -71 348 313 0 20 chr2 82986545 82986644 -167701210 + MIR SINE MIR 2 98 -164 370 407 0 0 chr2 82987635 82987785 -167700069 + MIR3 SINE MIR 19 168 -40 191 261 46 15 chr2 82989004 82989069 -167698785 + L3 LINE CR1 643 709 -868 2797 184 53 14 chr2 82991148 82991729 -167696125 - MER6A DNA MER2_type 0 605 2 246 306 92 20 chr2 82992074 82992172 -167695682 - MIR SINE MIR -63 145 41 220 206 59 22 chr2 82992281 82992417 -167695437 + (TA)n Simple_repeat Simple_repeat 1 141 0 21 36 0 0 chr2 82993023 82993051 -167694803 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 82993879 82993904 -167693950 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr2 82994974 82995005 -167692849 + AT_rich Low_complexity Low_complexity 1 31 0 224 297 76 34 chr2 82995468 82995586 -167692268 + L2 LINE L2 3150 3272 0 246 286 76 17 chr2 82996088 82996207 -167691647 + LTR33 LTR ERVL 389 514 -7 59 38 0 0 chr2 82996654 82996734 -167691120 + AT_rich Low_complexity Low_complexity 1 80 0 21 0 0 0 chr2 82996931 82996952 -167690902 + AT_rich Low_complexity Low_complexity 1 21 0 2467 65 0 3 chr2 82997459 82997767 -167690087 + AluY SINE Alu 1 307 -4 355 240 16 70 chr2 83000448 83000577 -167687277 + L2 LINE L2 3150 3271 -42 269 375 10 0 chr2 83000607 83000703 -167687151 + L2 LINE L2 2219 2315 -999 323 245 41 0 chr2 83000728 83000826 -167687028 - L1MA9 LINE L1 -13 6299 6198 230 343 136 47 chr2 83000834 83001172 -167686682 + L2 LINE L2 2332 2699 -615 2237 118 0 0 chr2 83001377 83001681 -167686173 - AluSx SINE Alu -8 304 1 234 376 0 0 chr2 83002728 83002837 -167685017 + HAL1 LINE L1 1584 1692 -815 377 310 18 0 chr2 83003114 83003227 -167684627 + L2 LINE L2 3197 3311 -2 2069 104 55 0 chr2 83003669 83003958 -167683896 + AluSx SINE Alu 1 305 -7 9233 53 7 1 chr2 83004525 83006471 -167681383 - L1PA5 LINE L1 -1 6153 4199 32500 67 2 0 chr2 83006471 83010654 -167677200 + L1PA5 LINE L1 33 4224 -1922 549 214 0 0 chr2 83010788 83010900 -167676954 + FLAM_A SINE Alu 28 139 -3 1119 222 93 51 chr2 83011795 83012096 -167675758 - MLT1A1 LTR MaLR 0 365 47 2465 74 0 0 chr2 83012096 83012394 -167675460 + AluY SINE Alu 1 298 -13 1119 222 93 51 chr2 83012394 83012425 -167675429 - MLT1A1 LTR MaLR -318 47 19 3196 247 52 90 chr2 83012444 83013815 -167674039 - MLT1A1-int LTR MaLR -7 1364 46 250 163 0 0 chr2 83013879 83013922 -167673932 + L1MCa LINE L1 1352 1394 -5032 580 286 70 22 chr2 83013993 83014409 -167673445 + L1MCa LINE L1 1618 2053 -4554 840 188 86 0 chr2 83014419 83014605 -167673249 + MER3 DNA MER1_type 1 202 -7 1080 251 10 7 chr2 83014737 83015028 -167672826 + L1ME1 LINE L1 5692 5983 -183 26 0 0 0 chr2 83015092 83015118 -167672736 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr2 83015168 83015197 -167672657 + AT_rich Low_complexity Low_complexity 1 29 0 191 318 100 0 chr2 83016010 83016120 -167671734 - L2 LINE L2 -71 3242 3122 2152 138 0 0 chr2 83017699 83018010 -167669844 - AluSx SINE Alu -1 311 1 357 344 166 19 chr2 83018753 83019073 -167668781 + MLT1J2 LTR MaLR 11 377 -73 2373 138 9 61 chr2 83020143 83020180 -167667674 - MSTB1 LTR MaLR 0 432 395 2183 122 0 0 chr2 83020180 83020475 -167667379 + AluSx SINE Alu 1 295 -17 2373 138 9 61 chr2 83020475 83020878 -167666976 - MSTB1 LTR MaLR -37 395 15 270 338 57 9 chr2 83020971 83021199 -167666655 - HAL1 LINE L1 -1167 1340 1102 391 110 24 49 chr2 83022034 83022116 -167665738 + L1MB1 LINE L1 6089 6168 -21 830 168 6 22 chr2 83022137 83022316 -167665538 + L1MA10 LINE L1 6159 6334 0 771 270 71 57 chr2 83023314 83023337 -167664517 - MLT1I LTR MaLR -2 407 386 640 264 62 29 chr2 83023337 83023545 -167664309 + MER20 DNA MER1_type 2 216 -3 771 270 71 57 chr2 83023545 83023817 -167664037 - MLT1I LTR MaLR -23 386 108 1000 258 18 25 chr2 83023826 83024101 -167663753 - MLT1E LTR MaLR -2 591 319 2267 115 9 6 chr2 83024111 83024450 -167663404 - L1PB1 LINE L1 -156 5995 5656 1387 192 8 0 chr2 83024538 83024778 -167663076 + AluJb SINE Alu 39 280 -32 216 0 0 0 chr2 83024780 83024804 -167663050 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 207 0 0 0 chr2 83025035 83025058 -167662796 + (TTTAA)n Simple_repeat Simple_repeat 5 27 0 21 71 0 0 chr2 83025760 83025802 -167662052 + AT_rich Low_complexity Low_complexity 1 42 0 212 57 0 29 chr2 83026602 83026637 -167661217 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 6119 33 0 0 chr2 83026637 83027358 -167660496 - L1PA4 LINE L1 -24 6131 5411 779 271 84 78 chr2 83027893 83028405 -167659449 + MLT1H1 LTR MaLR 39 553 -2 1962 101 11 17 chr2 83028596 83028883 -167658971 + AluSp SINE Alu 24 308 -5 187 319 14 14 chr2 83030954 83031026 -167656828 + L3 LINE CR1 928 999 -578 243 293 19 47 chr2 83031996 83032102 -167655752 - LTR67 LTR ERVL -24 533 431 22 70 0 0 chr2 83032674 83032717 -167655137 + AT_rich Low_complexity Low_complexity 1 43 0 1336 260 49 13 chr2 83033183 83033771 -167654083 + L1M4 LINE L1 3552 4189 -1957 308 289 0 0 chr2 83033791 83033881 -167653973 + L1M4 LINE L1 4148 4237 -1909 2144 87 0 11 chr2 83033895 83034170 -167653684 + AluSg SINE Alu 21 292 -18 1222 191 8 29 chr2 83034179 83034420 -167653434 - L1PA13 LINE L1 -4924 1863 1628 2800 234 48 22 chr2 83034459 83035368 -167652486 + L1M4 LINE L1 4235 5167 -979 1418 60 50 11 chr2 83035368 83035550 -167652304 + AluY SINE Alu 1 189 -122 686 286 76 66 chr2 83035941 83036455 -167651399 + LTR33A LTR ERVL 38 523 0 254 333 18 3 chr2 83037481 83037595 -167650259 + MIR SINE MIR 5 123 -85 195 260 0 0 chr2 83037602 83037652 -167650202 - MIR SINE MIR -102 160 111 258 315 0 4 chr2 83038001 83038154 -167649700 + MLT1I LTR MaLR 196 396 -13 321 308 42 42 chr2 83038160 83038303 -167649551 + MIR3 SINE MIR 64 206 -2 1610 197 63 29 chr2 83038326 83038707 -167649147 + MSTD LTR MaLR 1 394 -2 390 286 23 8 chr2 83039766 83039899 -167647955 - MIR SINE MIR -60 202 68 243 0 0 0 chr2 83040025 83040052 -167647802 + (TA)n Simple_repeat Simple_repeat 1 27 0 841 92 110 0 chr2 83040325 83040488 -167647366 + AluY SINE Alu 109 289 -22 3734 164 40 58 chr2 83040489 83041511 -167646343 + L1MB7 LINE L1 5120 6133 -51 25 31 0 0 chr2 83042080 83042112 -167645742 + AT_rich Low_complexity Low_complexity 1 32 0 600 215 31 21 chr2 83042137 83042328 -167645526 - HAL1b LINE L1 -180 1168 976 523 305 71 0 chr2 83042412 83042638 -167645216 + Charlie8 DNA MER1_type 48 289 -2128 277 178 67 33 chr2 83044617 83044707 -167643147 - MLT1L LTR MaLR -20 595 503 627 308 9 103 chr2 83044715 83045141 -167642713 + L2 LINE L2 2587 2972 -342 1285 192 87 26 chr2 83045168 83045480 -167642374 - MLT2D LTR ERVL 0 414 84 295 327 120 30 chr2 83045518 83045784 -167642070 + L2 LINE L2 3004 3293 -20 368 240 0 110 chr2 83046659 83046805 -167641049 - FLAM_A SINE Alu -3 130 1 470 328 0 0 chr2 83047192 83047323 -167640531 + ERVL LTR ERVL 567 697 -5067 331 177 42 42 chr2 83047936 83048032 -167639822 + L1MC5 LINE L1 7805 7900 -61 809 281 32 35 chr2 83048210 83048495 -167639359 + ERVL LTR ERVL 4078 4361 -1403 710 311 42 19 chr2 83048738 83049047 -167638807 + ERVL LTR ERVL 4443 4758 -1006 914 296 45 32 chr2 83049084 83049543 -167638311 + ERVL LTR ERVL 4853 5294 -360 522 0 0 0 chr2 83050119 83050177 -167637677 + (TA)n Simple_repeat Simple_repeat 1 58 0 3456 151 31 3 chr2 83050482 83051093 -167636761 + L1MC1 LINE L1 5700 6327 -6 195 281 149 18 chr2 83053349 83053463 -167634391 + L2 LINE L2 3184 3312 -1 181 352 0 0 chr2 83053468 83053522 -167634332 + L2 LINE L2 3219 3272 0 21 0 0 0 chr2 83054418 83054439 -167633415 + GC_rich Low_complexity Low_complexity 1 21 0 347 226 6 18 chr2 83054839 83055007 -167632847 + CT-rich Low_complexity Low_complexity 1 166 0 255 196 36 18 chr2 83055514 83055570 -167632284 + GA-rich Low_complexity Low_complexity 3 59 0 199 313 75 12 chr2 83057591 83057671 -167630183 - L2 LINE L2 -86 3186 3102 * 278 343 107 12 chr2 83057659 83057828 -167630026 + MIR SINE MIR 10 194 -68 192 316 77 8 chr2 83058043 83058160 -167629694 - L2 LINE L2 -299 2973 2849 2355 97 0 0 chr2 83060560 83060859 -167626995 + AluSx SINE Alu 3 301 -11 184 258 45 61 chr2 83060952 83061018 -167626836 - L2 LINE L2 -4 3309 3245 711 274 139 3 chr2 83061723 83062011 -167625843 - L1ME2 LINE L1 -5 6159 5833 1742 223 95 14 chr2 83062011 83062672 -167625182 + L1ME LINE L1 5032 5752 -414 549 0 0 0 chr2 83062719 83062780 -167625074 + (TA)n Simple_repeat Simple_repeat 2 62 0 790 258 33 48 chr2 83063031 83063302 -167624552 - MLT1L LTR MaLR -348 267 1 204 272 76 0 chr2 83064355 83064447 -167623407 - L2 LINE L2 -1012 2302 2204 383 228 184 44 chr2 83064506 83064778 -167623076 - L1ME4a LINE L1 -19 6102 5793 838 301 70 19 chr2 83064974 83065531 -167622323 - L1MC4a LINE L1 -339 5825 5317 316 299 86 32 chr2 83065657 83066066 -167621788 - L1MC4a LINE L1 -1446 4700 4264 270 56 0 0 chr2 83066138 83066174 -167621680 + (CA)n Simple_repeat Simple_repeat 2 37 0 443 48 0 238 chr2 83067110 83067169 -167620685 - MADE1 DNA Mariner 0 80 55 224 0 65 0 chr2 83067169 83067200 -167620654 + (CATTA)n Simple_repeat Simple_repeat 3 35 0 443 48 0 238 chr2 83067200 83067245 -167620609 - MADE1 DNA Mariner -25 55 1 23 33 0 0 chr2 83067747 83067777 -167620077 + AT_rich Low_complexity Low_complexity 1 30 0 21 71 0 0 chr2 83067815 83067857 -167619997 + AT_rich Low_complexity Low_complexity 1 42 0 3468 190 34 49 chr2 83067924 83068963 -167618891 + L1MB7 LINE L1 4461 5465 -719 1674 102 84 56 chr2 83068963 83069247 -167618607 + AluSc SINE Alu 1 292 -17 3468 190 34 49 chr2 83069247 83069810 -167618044 + L1MB7 LINE L1 5465 6035 -149 195 42 0 0 chr2 83069810 83069834 -167618020 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 820 220 82 0 chr2 83069844 83069990 -167617864 - AluJo SINE Alu -30 282 117 189 0 0 0 chr2 83069990 83070011 -167617843 + (TTA)n Simple_repeat Simple_repeat 2 22 0 820 220 82 0 chr2 83070011 83070046 -167617808 - AluJo SINE Alu -195 117 86 573 146 36 51 chr2 83070047 83070184 -167617670 + L1MB7 LINE L1 6027 6161 -23 181 344 77 56 chr2 83070644 83070839 -167617015 - L2 LINE L2 -237 3035 2837 253 375 40 6 chr2 83070979 83071155 -167616699 - L2 LINE L2 -956 2358 2177 247 268 81 86 chr2 83072165 83072363 -167615491 - L2 LINE L2 -1311 2003 1807 369 0 0 0 chr2 83072808 83072849 -167615005 + (TA)n Simple_repeat Simple_repeat 1 41 0 2284 99 0 0 chr2 83073296 83073590 -167614264 - AluSg SINE Alu -14 296 3 21 0 0 0 chr2 83073597 83073618 -167614236 + AT_rich Low_complexity Low_complexity 1 21 0 201 122 0 49 chr2 83074315 83074356 -167613498 + (TCTCTG)n Simple_repeat Simple_repeat 1 39 0 24 0 0 0 chr2 83075821 83075845 -167612009 + AT_rich Low_complexity Low_complexity 1 24 0 2128 84 42 3 chr2 83076829 83077116 -167610738 - AluSg SINE Alu -12 298 1 29 28 0 0 chr2 83077265 83077301 -167610553 + AT_rich Low_complexity Low_complexity 1 36 0 273 29 0 0 chr2 83078187 83078221 -167609633 + (TG)n Simple_repeat Simple_repeat 2 35 0 1526 134 4 20 chr2 83078294 83078574 -167609280 - AluSx SINE Alu 0 316 41 275 339 89 62 chr2 83080318 83080610 -167607244 - L2 LINE L2 -472 2842 2543 299 345 27 58 chr2 83080611 83080869 -167606985 + L3 LINE CR1 791 1040 -537 317 276 0 0 chr2 83081638 83081714 -167606140 + L2 LINE L2 3182 3257 -56 862 252 96 0 chr2 83081814 83082032 -167605822 + MIR SINE MIR 2 240 -22 197 240 13 0 chr2 83082764 83082839 -167605015 + (TA)n Simple_repeat Simple_repeat 1 76 0 294 244 12 12 chr2 83082919 83083001 -167604853 + (TA)n Simple_repeat Simple_repeat 1 82 0 312 276 0 0 chr2 83083005 83083081 -167604773 - L1MC4 LINE L1 -1342 6700 6625 2325 95 0 0 chr2 83083243 83083537 -167604317 - AluSc SINE Alu -15 294 1 444 298 130 39 chr2 83084114 83084322 -167603532 + MIR SINE MIR 28 254 -8 1862 144 21 0 chr2 83085566 83085850 -167602004 - AluSx SINE Alu -22 290 1 808 312 108 17 chr2 83086699 83087154 -167600700 + MLT1J LTR MaLR 2 445 -5 22 0 0 0 chr2 83087234 83087256 -167600598 + AT_rich Low_complexity Low_complexity 1 22 0 1000 227 37 29 chr2 83087464 83087706 -167600148 - MIR SINE MIR -4 258 15 216 184 0 0 chr2 83088636 83088685 -167599169 + (TG)n Simple_repeat Simple_repeat 2 50 0 1253 315 93 50 chr2 83090979 83091814 -167596040 - HERVL LTR ERVL -2888 2766 1896 700 335 11 18 chr2 83091820 83092095 -167595759 - LTR16A LTR ERVL -162 288 16 304 266 55 55 chr2 83092386 83092514 -167595340 - MIR SINE MIR -124 138 11 838 195 118 118 chr2 83092740 83093207 -167594647 - MER4A LTR ERV1 -9 655 189 2057 146 138 5 chr2 83093207 83093585 -167594269 - MSTA LTR MaLR 0 428 1 7804 153 94 23 chr2 83093585 83095058 -167592796 - MSTA-int LTR MaLR 0 1580 3 1906 170 138 8 chr2 83095060 83095436 -167592418 - MSTA LTR MaLR 0 428 4 922 132 24 83 chr2 83095439 83095644 -167592210 - MER4A LTR ERV1 -471 193 1 785 237 27 49 chr2 83098574 83098798 -167589056 - L3b LINE CR1 -108 1475 1257 236 270 14 14 chr2 83100528 83100602 -167587252 + CT-rich Low_complexity Low_complexity 2 75 0 195 326 20 20 chr2 83100902 83101000 -167586854 - MER5A DNA MER1_type -29 160 63 206 338 141 7 chr2 83101466 83101608 -167586246 - MIR SINE MIR -30 232 72 217 311 74 41 chr2 83101767 83101889 -167585965 - L2 LINE L2 -1335 1979 1854 4201 181 47 35 chr2 83102532 83103950 -167583904 - L1MB7 LINE L1 -11 6173 4730 228 86 0 0 chr2 83104485 83104520 -167583334 + (TG)n Simple_repeat Simple_repeat 1 35 0 246 62 0 0 chr2 83104769 83104801 -167583053 + (TA)n Simple_repeat Simple_repeat 2 33 0 59 44 0 26 chr2 83105824 83105937 -167581917 + AT_rich Low_complexity Low_complexity 1 110 0 264 247 0 52 chr2 83106530 83106607 -167581247 + L2 LINE L2 3150 3222 -91 520 344 140 27 chr2 83106674 83106753 -167581101 - L2 LINE L2 -571 2743 2674 1696 171 45 18 chr2 83106753 83107087 -167580767 - MER61A LTR ERV1 0 343 1 520 344 140 27 chr2 83107087 83107748 -167580106 - L2 LINE L2 -640 2674 1919 241 271 29 14 chr2 83109875 83109945 -167577909 + L2 LINE L2 3227 3297 -16 2095 116 20 3 chr2 83110074 83110376 -167577478 + AluSx SINE Alu 3 309 -3 1578 192 0 39 chr2 83110492 83110799 -167577055 + AluJb SINE Alu 1 295 -17 270 273 137 36 chr2 83113070 83113209 -167574645 - L3 LINE CR1 -4 1573 1421 298 385 119 15 chr2 83113281 83113608 -167574246 + L2 LINE L2 2601 2961 -353 241 263 337 0 chr2 83114118 83114213 -167573641 + MIR3 SINE MIR 15 141 -67 1942 155 0 7 chr2 83114220 83114517 -167573337 + AluSx SINE Alu 1 295 -17 5708 133 7 0 chr2 83115963 83116846 -167571008 - L1PA15 LINE L1 -1 6164 5276 537 297 74 15 chr2 83117562 83117764 -167570090 + MIR SINE MIR 20 233 -29 342 189 68 0 chr2 83117821 83117895 -167569959 + MARNA DNA Mariner 295 373 -213 319 313 60 65 chr2 83117997 83118198 -167569656 + L1ME2 LINE L1 5959 6158 -6 1951 37 0 37 chr2 83120402 83120643 -167567211 + AluY SINE Alu 80 311 0 232 273 146 49 chr2 83120657 83120862 -167566992 - L2 LINE L2 -1067 2247 2023 22 56 0 0 chr2 83121029 83121065 -167566789 + AT_rich Low_complexity Low_complexity 1 36 0 445 193 14 43 chr2 83121065 83121205 -167566649 - L1ME4a LINE L1 -80 6041 5906 442 215 11 0 chr2 83121205 83121298 -167566556 - U6 snRNA snRNA 0 107 14 614 301 49 46 chr2 83121311 83121677 -167566177 - L2 LINE L2 -1384 1930 1564 245 358 45 8 chr2 83122204 83122338 -167565516 + MIR SINE MIR 117 255 -7 23 0 0 0 chr2 83123103 83123126 -167564728 + AT_rich Low_complexity Low_complexity 1 23 0 198 314 23 35 chr2 83123607 83123693 -167564161 + L2 LINE L2 3186 3270 -2 25 0 0 0 chr2 83123827 83123852 -167564002 + AT_rich Low_complexity Low_complexity 1 25 0 270 0 0 0 chr2 83124275 83124305 -167563549 + (TG)n Simple_repeat Simple_repeat 1 30 0 201 337 34 0 chr2 83126814 83126903 -167560951 + L3b LINE CR1 1261 1352 -231 2209 94 3 0 chr2 83127254 83127542 -167560312 + AluSc SINE Alu 1 289 -20 875 220 11 0 chr2 83127712 83127898 -167559956 + MER5A DNA MER1_type 1 188 -1 1444 234 62 35 chr2 83127898 83128300 -167559554 - MLT1E2 LTR MaLR 0 626 214 2004 111 7 7 chr2 83128374 83128678 -167559176 - AluSg SINE Alu 0 304 1 735 148 0 63 chr2 83128684 83128826 -167559028 - MLT1E2 LTR MaLR -442 184 52 334 305 106 35 chr2 83129256 83129312 -167558542 + MIR SINE MIR 4 55 -207 1879 175 0 13 chr2 83129312 83129627 -167558227 - AluJb SINE Alu -1 311 1 334 305 106 35 chr2 83129627 83129711 -167558143 + MIR SINE MIR 55 154 -108 199 337 50 40 chr2 83130084 83130185 -167557669 - MIR SINE MIR -78 184 83 21 0 0 0 chr2 83130677 83130698 -167557156 + GC_rich Low_complexity Low_complexity 1 21 0 534 269 66 19 chr2 83130809 83131116 -167556738 - L1 LINE L1 -1089 5057 4744 686 144 15 37 chr2 83131338 83131611 -167556243 + CT-rich Low_complexity Low_complexity 1 266 0 2294 93 7 0 chr2 83131941 83132241 -167555613 - AluSp SINE Alu -11 302 1 1411 259 91 13 chr2 83132500 83132973 -167554881 + MLT1E2 LTR MaLR 115 625 -1 2001 142 3 0 chr2 83133571 83133867 -167553987 + AluSx SINE Alu 1 297 -15 619 275 52 5 chr2 83134421 83134614 -167553240 + MIR SINE MIR 61 262 0 234 253 137 61 chr2 83134772 83135065 -167552789 - L1MC5 LINE L1 -167 7794 7480 1387 218 66 73 chr2 83135075 83135549 -167552305 - L1ME1 LINE L1 -5 6161 5680 1165 229 38 41 chr2 83135813 83136158 -167551696 - L1ME1 LINE L1 -480 5686 5343 387 233 0 33 chr2 83136450 83136570 -167551284 - L1MC5 LINE L1 -751 7210 7095 2210 106 23 3 chr2 83136843 83137146 -167550708 - AluSx SINE Alu -2 310 2 296 301 75 33 chr2 83137610 83137823 -167550031 - L1ME1 LINE L1 -1929 4217 3996 24 32 0 0 chr2 83137824 83137855 -167549999 + AT_rich Low_complexity Low_complexity 1 31 0 240 35 0 0 chr2 83138835 83138864 -167548990 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 4046 109 7 0 chr2 83139007 83139595 -167548259 - L1PB2 LINE L1 -3 6148 5557 535 182 134 59 chr2 83139595 83139782 -167548072 - MIR SINE MIR -60 202 2 261 270 30 20 chr2 83139792 83139892 -167547962 + CT-rich Low_complexity Low_complexity 1 101 0 229 255 245 0 chr2 83141258 83141352 -167546502 + MIR SINE MIR 136 252 -10 27 0 0 0 chr2 83144227 83144254 -167543600 + AT_rich Low_complexity Low_complexity 1 27 0 2375 85 0 35 chr2 83144440 83144759 -167543095 - AluSq SINE Alu -5 308 1 2169 121 3 3 chr2 83146208 83146515 -167541339 - AluSx SINE Alu -5 307 1 608 312 49 8 chr2 83146628 83146875 -167540979 + MIR SINE MIR 4 260 -2 183 162 0 0 chr2 83147159 83147196 -167540658 + (CAT)n Simple_repeat Simple_repeat 2 38 0 722 372 74 31 chr2 83147343 83148184 -167539670 + L2 LINE L2 1879 2755 -559 323 270 40 0 chr2 83148506 83148580 -167539274 + L2 LINE L2 3191 3267 -5 2351 58 20 0 chr2 83149520 83149813 -167538041 + AluY SINE Alu 3 301 -10 6256 167 20 24 chr2 83149939 83151615 -167536239 - L1MC1 LINE L1 0 6333 4667 354 255 99 121 chr2 83152186 83152500 -167535354 + L3 LINE CR1 1141 1447 -130 1868 151 3 7 chr2 83152506 83152804 -167535050 - AluSx SINE Alu -15 297 1 1661 198 39 20 chr2 83152999 83153357 -167534497 - MLT1A1 LTR MaLR 0 365 1 1889 156 77 3 chr2 83154144 83154484 -167533370 - MER47A DNA MER2_type 0 366 2 718 306 139 32 chr2 83154516 83155917 -167531937 + L1M4 LINE L1 3791 5341 -805 361 161 0 0 chr2 83156519 83156575 -167531279 - Tigger5 DNA MER2_type -2243 80 25 6814 256 78 41 chr2 83156635 83157949 -167529905 + L1ME1 LINE L1 111 1375 -4860 1442 193 37 27 chr2 83157949 83158069 -167529785 + AluJo SINE Alu 1 118 -194 219 69 0 0 chr2 83158069 83158098 -167529756 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1442 193 37 27 chr2 83158098 83158277 -167529577 + AluJo SINE Alu 118 303 -9 6814 256 78 41 chr2 83158277 83158592 -167529262 + L1ME1 LINE L1 1375 1677 -4558 2262 92 0 3 chr2 83158592 83158895 -167528959 - AluY SINE Alu -9 302 1 6814 256 78 41 chr2 83158895 83161592 -167526262 + L1ME1 LINE L1 1677 4748 -1487 229 269 51 0 chr2 83161592 83161670 -167526184 - MER53 DNA DNA -1 188 107 6814 256 78 41 chr2 83161670 83163169 -167524685 + L1ME1 LINE L1 4748 6191 -44 283 221 214 8 chr2 83163073 83163204 -167524650 + L1MA10 LINE L1 6243 6400 -3 * 24 0 0 0 chr2 83165763 83165787 -167522067 + AT_rich Low_complexity Low_complexity 1 24 0 733 160 17 0 chr2 83166021 83166140 -167521714 - FLAM_C SINE Alu -11 122 2 552 281 32 45 chr2 83166148 83166369 -167521485 - MIR SINE MIR -43 219 2 3240 213 65 35 chr2 83166760 83167804 -167520050 - MER69 DNA AcHobo 0 2526 1451 1209 251 111 74 chr2 83167807 83168348 -167519506 - MER69 DNA AcHobo -1796 730 170 468 239 26 0 chr2 83168345 83168458 -167519396 + MER58B DNA MER1_type 214 329 -12 * 241 311 17 17 chr2 83169054 83169173 -167518681 - HAL1 LINE L1 -863 1644 1526 2285 105 0 7 chr2 83169217 83169522 -167518332 - AluSg SINE Alu -7 303 1 493 261 103 93 chr2 83169608 83169995 -167517859 - L1MEd LINE L1 -4914 1205 815 304 266 139 108 chr2 83170002 83170419 -167517435 - MLT1L LTR MaLR -17 598 169 2147 116 0 0 chr2 83171244 83171538 -167516316 + AluSx SINE Alu 1 294 -18 23 33 0 0 chr2 83171793 83171823 -167516031 + AT_rich Low_complexity Low_complexity 1 30 0 292 332 39 39 chr2 83172554 83172762 -167515092 + L2 LINE L2 2841 3048 -224 4259 170 107 24 chr2 83173505 83174468 -167513386 + L1MC3 LINE L1 6611 7653 -132 405 332 49 28 chr2 83174936 83175183 -167512671 - MLT1J2 LTR MaLR -70 380 129 255 321 0 0 chr2 83176303 83176384 -167511470 + CT-rich Low_complexity Low_complexity 2 82 0 184 365 108 6 chr2 83176961 83177128 -167510726 - L2 LINE L2 0 3313 3130 394 175 9 105 chr2 83177807 83177921 -167509933 - MER112 DNA MER1_type -157 103 1 594 75 0 0 chr2 83178894 83178974 -167508880 + (TG)n Simple_repeat Simple_repeat 2 81 0 29 0 0 0 chr2 83179239 83179268 -167508586 + AT_rich Low_complexity Low_complexity 1 29 0 2089 119 14 3 chr2 83180487 83180781 -167507073 + AluSx SINE Alu 1 297 -15 204 392 82 0 chr2 83181300 83181471 -167506383 + L2 LINE L2 2725 2909 -405 308 319 76 0 chr2 83181506 83181625 -167506229 - L1ME LINE L1 -469 5652 5525 225 308 157 11 chr2 83181814 83181999 -167505855 - L2 LINE L2 -2474 840 629 1854 207 30 90 chr2 83182086 83182689 -167505165 + MER74B LTR ERVL 56 622 0 24 32 0 0 chr2 83184488 83184519 -167503335 + AT_rich Low_complexity Low_complexity 1 31 0 783 260 23 9 chr2 83185131 83185350 -167502504 - MER58A DNA MER1_type -1 223 2 350 275 225 8 chr2 83185471 83185715 -167502139 - MLT1L LTR MaLR -97 518 222 603 329 111 43 chr2 83187246 83187537 -167500317 - L2 LINE L2 -541 2773 2503 1747 54 4 42 chr2 83187537 83187776 -167500078 + AluY SINE Alu 71 300 -11 603 329 111 43 chr2 83187776 83187815 -167500039 - L2 LINE L2 -811 2503 2468 2135 121 3 3 chr2 83187815 83188120 -167499734 - AluSq SINE Alu -8 305 1 603 329 111 43 chr2 83188120 83188295 -167499559 - L2 LINE L2 -846 2468 2233 645 214 8 0 chr2 83188296 83188427 -167499427 + AluY SINE Alu 1 132 -179 311 349 58 67 chr2 83239012 83239342 -167448512 - L2 LINE L2 -7 3265 2939 2220 131 28 0 chr2 83239612 83239964 -167447890 - L1MA6 LINE L1 -341 5959 5598 200 286 18 0 chr2 83241160 83241216 -167446638 + CT-rich Low_complexity Low_complexity 4 60 0 21 0 0 0 chr2 83242774 83242795 -167445059 + AT_rich Low_complexity Low_complexity 1 21 0 671 296 89 40 chr2 83243480 83243851 -167444003 - MLT1J2 LTR MaLR -14 436 48 234 0 0 0 chr2 83243953 83243979 -167443875 + (TG)n Simple_repeat Simple_repeat 1 26 0 252 122 0 0 chr2 83244012 83244053 -167443801 + (TA)n Simple_repeat Simple_repeat 2 42 0 2136 97 10 13 chr2 83244260 83244568 -167443286 + AluSq SINE Alu 1 307 -6 234 0 0 0 chr2 83245532 83245558 -167442296 + (A)n Simple_repeat Simple_repeat 1 26 0 1205 56 0 12 chr2 83245659 83245821 -167442033 + L1PA4 LINE L1 5995 6154 -1 194 280 60 30 chr2 83245894 83245994 -167441860 - L2 LINE L2 -902 2412 2310 * 435 287 161 0 chr2 83245965 83246139 -167441715 + MIR SINE MIR 51 252 -10 6376 159 19 13 chr2 83246457 83248216 -167439638 + L1PB1 LINE L1 4009 5783 -368 279 0 0 0 chr2 83248216 83248247 -167439607 + (TG)n Simple_repeat Simple_repeat 2 32 0 6376 159 19 13 chr2 83248247 83248618 -167439236 + L1PB1 LINE L1 5783 6150 -1 1185 254 64 9 chr2 83248712 83249058 -167438796 + MLT1C LTR MaLR 100 464 -3 506 345 169 21 chr2 83249144 83249581 -167438273 + L2 LINE L2 2173 2674 -640 534 264 43 115 chr2 83249601 83249706 -167438148 - LTR16A LTR ERVL -40 410 299 505 231 9 0 chr2 83249706 83249814 -167438040 - MER81 DNA DNA -2 112 4 534 264 43 115 chr2 83249814 83250124 -167437730 - LTR16A LTR ERVL -151 299 25 2892 225 39 42 chr2 83250358 83251345 -167436509 + L1M4 LINE L1 3887 4870 -1276 6782 76 4 53 chr2 83251350 83252379 -167435475 + L1PA4 LINE L1 5173 6155 0 1630 121 104 53 chr2 83252426 83252764 -167435090 + THE1A LTR MaLR 1 355 0 1416 99 5 0 chr2 83252786 83252997 -167434857 - L1P LINE L1 -3963 2183 1972 6966 62 6 0 chr2 83252997 83254113 -167433741 + L1PA7 LINE L1 5030 6151 -3 800 229 60 15 chr2 83254128 83254395 -167433459 + L1M4 LINE L1 4929 5207 -939 433 290 0 39 chr2 83254500 83254655 -167433199 + LTR16B LTR ERVL 172 320 -144 2309 99 3 7 chr2 83256232 83256535 -167431319 - AluSx SINE Alu -10 302 1 1554 138 68 37 chr2 83256868 83257193 -167430661 + L1MA4 LINE L1 5965 6299 -1 1668 207 3 0 chr2 83258465 83258764 -167429090 - AluJo SINE Alu -12 300 1 268 371 75 37 chr2 83259805 83260261 -167427593 + L2 LINE L2 2454 2926 -388 1036 181 0 0 chr2 83260654 83260825 -167427029 + AluSg/x SINE Alu 135 305 -7 22 35 0 0 chr2 83262163 83262192 -167425662 + AT_rich Low_complexity Low_complexity 1 29 0 1543 201 7 0 chr2 83262194 83262473 -167425381 + AluJo SINE Alu 2 282 -30 865 277 41 33 chr2 83262734 83263099 -167424755 - L2 LINE L2 -820 2494 2127 2251 109 3 0 chr2 83264320 83264622 -167423232 - AluSx SINE Alu -9 303 1 897 158 134 0 chr2 83266014 83266178 -167421676 + MER5A DNA MER1_type 4 189 0 2031 100 27 13 chr2 83266520 83266645 -167421209 + AluSg SINE Alu 1 123 -187 516 16 0 0 chr2 83266645 83266706 -167421148 + (CA)n Simple_repeat Simple_repeat 2 62 0 2031 100 27 13 chr2 83266706 83266880 -167420974 + AluSg SINE Alu 123 304 -6 2099 128 6 6 chr2 83267040 83267352 -167420502 + AluSx SINE Alu 1 312 0 228 281 55 105 chr2 83267992 83268230 -167419624 - L2 LINE L2 -1264 2050 1825 209 250 21 21 chr2 83268387 83268435 -167419419 + L2 LINE L2 3201 3248 -24 2246 120 0 0 chr2 83269586 83269895 -167417959 - AluSg SINE Alu -1 309 1 1647 166 4 22 chr2 83270772 83271050 -167416804 + AluJo SINE Alu 1 273 -39 282 309 26 62 chr2 83271261 83271455 -167416399 + MER5A DNA MER1_type 2 188 -1 323 284 75 8 chr2 83272076 83272210 -167415644 - L2 LINE L2 0 3313 3171 1783 220 33 9 chr2 83272265 83272816 -167415038 + L1MC/D LINE L1 5103 5666 -743 366 156 393 0 chr2 83272850 83272972 -167414882 - L1MC3 LINE L1 0 7785 7616 391 273 71 61 chr2 83273443 83273641 -167414213 + MIR SINE MIR 31 230 -32 1381 169 12 4 chr2 83274174 83274422 -167413432 - L1PA16 LINE L1 -9 6157 5908 2905 13 0 0 chr2 83275410 83275726 -167412128 + AluYb8 SINE Alu 1 316 -2 6370 126 114 14 chr2 83276828 83277989 -167409865 - MER52C LTR ERV1 -1 1277 1 21 0 0 0 chr2 83278103 83278124 -167409730 + AT_rich Low_complexity Low_complexity 1 21 0 200 325 62 0 chr2 83279073 83279153 -167408701 + MIR SINE MIR 178 262 0 25 0 0 0 chr2 83279486 83279511 -167408343 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 83280006 83280035 -167407819 + AT_rich Low_complexity Low_complexity 1 29 0 2353 97 6 3 chr2 83280148 83280459 -167407395 - AluSq SINE Alu -1 312 1 562 282 29 17 chr2 83281442 83281616 -167406238 - MER5A DNA MER1_type 0 189 14 22 35 0 0 chr2 83283020 83283049 -167404805 + AT_rich Low_complexity Low_complexity 1 29 0 356 236 9 47 chr2 83283135 83283241 -167404613 + L2 LINE L2 3209 3310 -3 21 0 0 0 chr2 83283630 83283651 -167404203 + AT_rich Low_complexity Low_complexity 1 21 0 400 316 18 0 chr2 83284671 83284785 -167403069 - L3 LINE CR1 -1 1576 1461 1966 139 26 3 chr2 83285284 83285587 -167402267 + AluJb SINE Alu 2 311 -1 1479 112 5 5 chr2 83287150 83287356 -167400498 + AluSg/x SINE Alu 78 283 -27 29 0 0 0 chr2 83287357 83287386 -167400468 + AT_rich Low_complexity Low_complexity 1 29 0 220 351 30 22 chr2 83287786 83287920 -167399934 + L2 LINE L2 2373 2507 -807 692 285 163 5 chr2 83287959 83288180 -167399674 + MIR SINE MIR 2 257 -5 225 0 0 0 chr2 83288249 83288274 -167399580 + (TG)n Simple_repeat Simple_repeat 2 26 0 1600 186 93 16 chr2 83288292 83288657 -167399197 - MLT2C1 LTR ERVL -4 393 1 222 369 36 18 chr2 83290010 83290121 -167397733 + MIR3 SINE MIR 65 177 -31 192 395 92 7 chr2 83291655 83291807 -167396047 - MIR3 SINE MIR -1 207 43 183 240 20 20 chr2 83293358 83293394 -167394460 - L3 LINE CR1 -369 1208 1173 351 229 0 0 chr2 83293394 83293455 -167394399 - MER5A DNA MER1_type -1 188 128 8733 116 18 9 chr2 83293972 83294713 -167393141 - L1M1 LINE L1 -4397 3168 2409 2364 99 0 0 chr2 83294713 83295015 -167392839 - AluSg SINE Alu -8 302 1 8733 116 18 9 chr2 83295015 83295642 -167392212 - L1M1 LINE L1 -5156 2409 1789 3109 194 87 73 chr2 83295634 83296483 -167391371 - L1M1 LINE L1 -6689 876 16 * 2401 72 0 3 chr2 83296812 83297116 -167390738 - AluY SINE Alu -8 303 1 872 160 19 6 chr2 83297810 83297966 -167389888 + MER3 DNA MER1_type 7 164 -45 1176 141 32 0 chr2 83298016 83298201 -167389653 + MER20 DNA MER1_type 29 219 0 277 303 59 34 chr2 83298713 83298832 -167389022 - MIR SINE MIR -116 146 25 282 290 90 0 chr2 83298857 83298957 -167388897 - MIR3 SINE MIR -54 154 46 3410 113 51 10 chr2 83299302 83299808 -167388046 - MER1A DNA MER1_type 0 527 1 186 133 0 0 chr2 83300010 83300040 -167387814 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 191 328 0 15 chr2 83300140 83300207 -167387647 - L2 LINE L2 -1 3312 3247 1253 152 72 34 chr2 83300588 83300825 -167387029 - AluJo SINE Alu -30 282 37 239 211 96 0 chr2 83301176 83301228 -167386626 - MLT1K LTR MaLR -12 576 520 1396 160 45 33 chr2 83301235 83301578 -167386276 - MER4A LTR ERV1 0 646 261 528 134 31 21 chr2 83301578 83301675 -167386179 - MER4A LTR ERV1 -566 98 1 571 262 68 54 chr2 83301955 83302176 -167385678 + MLT1H LTR MaLR 3 226 -323 3006 36 0 0 chr2 83303707 83304066 -167383788 - L1PA2 LINE L1 -4 6151 5793 1202 0 0 0 chr2 83304066 83304199 -167383655 + L1P2 LINE L1 5474 5606 -549 1812 209 87 39 chr2 83305344 83305826 -167382028 - MLT1D LTR MaLR 0 505 1 2125 248 15 103 chr2 83305826 83306605 -167381249 - MLT1D-int LTR MaLR 0 1371 661 2986 193 7 40 chr2 83306656 83307334 -167380520 - MLT1D-int LTR MaLR -715 656 1 1664 210 113 29 chr2 83307334 83307777 -167380077 - MLT1D LTR MaLR 0 505 26 733 235 173 0 chr2 83307917 83308189 -167379665 + MER5C DNA MER1_type 6 324 0 2197 124 0 0 chr2 83308614 83308912 -167378942 + AluSx SINE Alu 1 298 -14 1024 320 111 39 chr2 83309917 83310965 -167376889 + L1M4 LINE L1 2850 3972 -2174 275 323 191 5 chr2 83311268 83311457 -167376397 + MIR SINE MIR 24 247 -15 36 53 0 0 chr2 83312015 83312072 -167375782 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr2 83312091 83312112 -167375742 + AT_rich Low_complexity Low_complexity 1 21 0 1506 188 34 20 chr2 83312782 83313080 -167374774 + AluJo SINE Alu 1 302 -10 327 208 16 56 chr2 83313160 83313285 -167374569 + (CATATA)n Simple_repeat Simple_repeat 4 123 0 241 202 5 53 chr2 83313289 83313394 -167374460 - L1MC3 LINE L1 -1139 6702 6571 186 177 32 16 chr2 83313401 83313463 -167374391 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 27 73 0 0 chr2 83313521 83313576 -167374278 + AT_rich Low_complexity Low_complexity 1 55 0 517 309 65 31 chr2 83315898 83316189 -167371665 + L2 LINE L2 1990 2290 -1024 782 318 91 42 chr2 83316214 83316943 -167370911 + L2 LINE L2 2540 3313 0 491 167 36 43 chr2 83317575 83317713 -167370141 + MER53 DNA DNA 2 138 -51 437 173 7 65 chr2 83317590 83317729 -167370125 - MER53 DNA DNA -7 182 52 * 2579 52 7 0 chr2 83317770 83318078 -167369776 - AluY SINE Alu -1 310 1 1035 79 0 0 chr2 83319318 83319457 -167368397 - L1PA10 LINE L1 -2 6166 6028 22 0 0 0 chr2 83320121 83320143 -167367711 + AT_rich Low_complexity Low_complexity 1 22 0 428 356 59 13 chr2 83321133 83321183 -167366671 - MIR SINE MIR 0 262 216 444 19 0 0 chr2 83321183 83321236 -167366618 + (TG)n Simple_repeat Simple_repeat 2 54 0 428 356 59 13 chr2 83321236 83321424 -167366430 - MIR SINE MIR -46 216 13 1878 146 10 13 chr2 83321915 83322217 -167365637 + AluSx SINE Alu 1 301 -11 316 211 29 29 chr2 83322276 83322380 -167365474 - L1M4 LINE L1 -2256 3890 3787 337 184 0 23 chr2 83322404 83322491 -167365363 + (CATA)n Simple_repeat Simple_repeat 1 85 0 525 250 0 0 chr2 83322736 83322836 -167365018 - MER58 DNA MER1_type -241 100 1 3268 126 43 7 chr2 83323642 83324233 -167363621 + MER4B LTR ERV1 1 779 0 4202 83 2 2 chr2 83324803 83325357 -167362497 - MER41A LTR ERV1 0 554 1 33 73 0 0 chr2 83325967 83326035 -167361819 + AT_rich Low_complexity Low_complexity 1 68 0 2236 125 0 0 chr2 83326080 83326392 -167361462 - AluSq SINE Alu -1 312 1 183 79 26 53 chr2 83327739 83327777 -167360077 - MIR SINE MIR 0 262 226 1063 280 104 17 chr2 83328150 83328554 -167359300 + L2 LINE L2 2102 2540 -774 715 277 67 0 chr2 83328554 83328807 -167359047 + L1ME3A LINE L1 5760 6029 -141 791 320 66 38 chr2 83328901 83329620 -167358234 + L2 LINE L2 2572 3312 -1 26 30 0 0 chr2 83330092 83330125 -167357729 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr2 83331036 83331060 -167356794 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 83331319 83331347 -167356507 + AT_rich Low_complexity Low_complexity 1 28 0 2130 214 45 6 chr2 83331350 83331836 -167356018 - MLT1D LTR MaLR 0 505 1 249 256 0 0 chr2 83332475 83332557 -167355297 + (CATA)n Simple_repeat Simple_repeat 1 82 0 246 306 46 37 chr2 83332864 83332972 -167354882 - MIR SINE MIR 0 262 154 368 330 124 42 chr2 83333030 83333798 -167354056 - L2 LINE L2 -210 3062 2229 247 355 113 29 chr2 83333957 83334337 -167353517 - L2 LINE L2 -1082 2232 1821 1242 218 19 8 chr2 83336026 83336292 -167351562 + LTR40b LTR ERVL 1 269 -193 299 164 73 0 chr2 83336290 83336345 -167351509 + LTR40b LTR ERVL 389 447 -15 * 279 335 108 34 chr2 83336497 83336673 -167351181 + MIR SINE MIR 13 201 -61 1217 251 52 92 chr2 83337049 83337551 -167350303 - LTR40a LTR ERVL -37 482 1 393 58 0 0 chr2 83337724 83337776 -167350078 + (CA)n Simple_repeat Simple_repeat 1 52 0 1244 107 5 10 chr2 83337801 83337997 -167349857 + L1PB1 LINE L1 5957 6151 0 415 22 0 233 chr2 83338128 83338218 -167349636 + MADE1 DNA Mariner 1 69 -11 1080 207 11 46 chr2 83338275 83338555 -167349299 - L1MA10 LINE L1 -34 6300 6031 1365 207 118 5 chr2 83338785 83339176 -167348678 - Zaphod DNA AcHobo -1 4030 3596 1043 257 135 21 chr2 83339425 83340162 -167347692 - Zaphod DNA AcHobo -3150 881 24 910 33 0 58 chr2 83340289 83340409 -167347445 + AluY SINE Alu 187 299 -12 2092 139 0 7 chr2 83341374 83341675 -167346179 + AluSg SINE Alu 1 299 -11 22 35 0 0 chr2 83341891 83341920 -167345934 + AT_rich Low_complexity Low_complexity 1 29 0 654 209 52 7 chr2 83342030 83342183 -167345671 + MER5A DNA MER1_type 4 163 -26 218 250 64 86 chr2 83342059 83342199 -167345655 - MER5A DNA MER1_type -27 162 26 * 189 0 0 0 chr2 83342556 83342577 -167345277 + (T)n Simple_repeat Simple_repeat 1 21 0 599 289 10 101 chr2 83345904 83346040 -167341814 + HERVL LTR ERVL 2071 2218 -3267 2499 90 0 0 chr2 83346040 83346352 -167341502 + AluSp SINE Alu 1 312 -1 599 289 10 101 chr2 83346352 83346582 -167341272 + HERVL LTR ERVL 2218 2408 -3077 3487 113 6 6 chr2 83347559 83348070 -167339784 - MER9 LTR ERVK 0 511 1 23 33 0 0 chr2 83348979 83349009 -167338845 + AT_rich Low_complexity Low_complexity 1 30 0 1860 150 43 9 chr2 83349522 83349869 -167337985 - MER46B DNA MER2_type -1 235 2 2434 71 0 3 chr2 83349986 83350281 -167337573 + AluY SINE Alu 1 294 -17 866 196 7 0 chr2 83352179 83352332 -167335522 + FRAM SINE Alu 1 147 -29 2585 45 0 10 chr2 83353303 83353616 -167334238 + AluY SINE Alu 1 310 -1 337 229 9 142 chr2 83355372 83355590 -167332264 + MER112 DNA MER1_type 62 250 -10 185 294 15 15 chr2 83355687 83355755 -167332099 + MIR SINE MIR 194 261 -1 25 0 0 0 chr2 83356300 83356325 -167331529 + AT_rich Low_complexity Low_complexity 1 25 0 515 250 167 0 chr2 83356781 83356949 -167330905 - MLT1J LTR MaLR -312 199 4 264 326 97 43 chr2 83357101 83357464 -167330390 - L2 LINE L2 -166 3106 2723 516 290 98 45 chr2 83359175 83359647 -167328207 + L1MEd LINE L1 438 934 -5185 216 152 0 43 chr2 83359647 83359693 -167328161 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 750 319 67 73 chr2 83360007 83360487 -167327367 - MLT1G1 LTR MaLR -15 580 104 321 288 114 37 chr2 83360957 83361586 -167326268 + L1MEd LINE L1 927 1604 -4706 1574 52 0 0 chr2 83361607 83361801 -167326053 - L1PA8 LINE L1 -310 5862 5669 480 244 8 8 chr2 83361803 83361922 -167325932 - MIR SINE MIR -98 164 46 6742 62 10 7 chr2 83362691 83364210 -167323644 + L1PA7 LINE L1 4631 6154 0 763 269 110 48 chr2 83364678 83365113 -167322741 - L2 LINE L2 -1633 1681 1220 3207 146 171 7 chr2 83366480 83367084 -167320770 - MER72 LTR ERV1 -19 703 1 3469 182 45 71 chr2 83367084 83367972 -167319882 - MER72-int LTR ERV1 0 6758 5894 353 289 73 5 chr2 83368141 83368293 -167319561 - MIR3 SINE MIR -2 206 47 1771 258 70 45 chr2 83369045 83369704 -167318150 + MER97a DNA MER1_type? 12 686 -208 437 284 35 45 chr2 83370432 83370633 -167317221 + MIR SINE MIR 63 261 -1 396 0 0 0 chr2 83370965 83371009 -167316845 + (CA)n Simple_repeat Simple_repeat 2 45 0 335 290 0 11 chr2 83371017 83371110 -167316744 - L1MC4 LINE L1 -1339 6703 6612 24 53 0 0 chr2 83371124 83371162 -167316692 + AT_rich Low_complexity Low_complexity 1 38 0 515 310 158 5 chr2 83372285 83372488 -167315366 - MIR SINE MIR 0 262 29 214 164 218 0 chr2 83372641 83372696 -167315158 - L2 LINE L2 -2 3311 3245 2080 155 13 0 chr2 83372896 83373199 -167314655 + AluSx SINE Alu 1 307 -5 302 330 64 34 chr2 83373208 83373328 -167314526 - L2 LINE L2 -339 2975 2860 1309 209 67 33 chr2 83373328 83373658 -167314196 + MER58B DNA MER1_type 1 341 0 302 330 64 34 chr2 83373658 83373773 -167314081 - L2 LINE L2 -454 2860 2733 21 36 0 0 chr2 83375055 83375083 -167312771 + AT_rich Low_complexity Low_complexity 1 28 0 240 277 12 12 chr2 83375200 83375283 -167312571 + (CATATA)n Simple_repeat Simple_repeat 5 87 0 2304 44 0 4 chr2 83375672 83375945 -167311909 - AluY SINE Alu -7 304 33 920 156 30 106 chr2 83376126 83376363 -167311491 + MER20 DNA MER1_type 1 219 0 1597 158 29 22 chr2 83376377 83376688 -167311166 + MER44D DNA MER2_type 1 583 -26 279 365 62 34 chr2 83377029 83377207 -167310647 - L2 LINE L2 -177 3095 2913 2540 49 3 0 chr2 83377247 83377553 -167310301 + AluY SINE Alu 1 307 -4 240 281 31 125 chr2 83378257 83378449 -167309405 - MER91A DNA MER1_type -22 174 1 182 167 83 0 chr2 83379135 83379171 -167308683 - L2 LINE L2 -8 3305 3267 28 0 0 0 chr2 83379773 83379801 -167308053 + AT_rich Low_complexity Low_complexity 1 28 0 215 342 37 0 chr2 83380577 83380692 -167307162 + MIR SINE MIR 92 214 -48 238 65 22 22 chr2 83381872 83381918 -167305936 + (TG)n Simple_repeat Simple_repeat 1 46 0 1344 223 43 15 chr2 83382849 83383176 -167304678 - MER58B DNA MER1_type 0 341 6 476 301 58 0 chr2 83383229 83383402 -167304452 - MIR SINE MIR -1 261 79 280 330 113 9 chr2 83383395 83383501 -167304353 + MIR SINE MIR 27 143 -65 * 288 265 83 23 chr2 83384085 83384217 -167303637 + L3 LINE CR1 198 337 -1240 881 146 0 0 chr2 83384464 83384594 -167303260 + FRAM SINE Alu 1 130 -46 24 0 0 0 chr2 83384600 83384624 -167303230 + AT_rich Low_complexity Low_complexity 1 24 0 256 365 0 10 chr2 83384628 83384724 -167303130 - L2 LINE L2 -23 3290 3196 373 287 122 18 chr2 83385112 83385276 -167302578 - MER91A DNA MER1_type -15 181 1 453 215 0 25 chr2 83385372 83385493 -167302361 + L1MB2 LINE L1 6054 6171 0 741 325 39 63 chr2 83385912 83386076 -167301778 + L3 LINE CR1 1024 1190 -387 2299 75 6 50 chr2 83386076 83386394 -167301460 + AluSq SINE Alu 4 307 -6 741 325 39 63 chr2 83386394 83386642 -167301212 + L3 LINE CR1 1190 1426 -151 467 285 186 29 chr2 83386948 83387362 -167300492 + HAL1 LINE L1 1344 1822 -685 23 0 0 0 chr2 83387394 83387417 -167300437 + AT_rich Low_complexity Low_complexity 1 23 0 1580 88 67 119 chr2 83387436 83387764 -167300090 - L1PA11 LINE L1 0 6174 5864 291 289 93 26 chr2 83387755 83388025 -167299829 + HAL1 LINE L1 1811 2098 -409 * 392 301 11 57 chr2 83388112 83388394 -167299460 + HAL1 LINE L1 2238 2506 -1 201 315 19 0 chr2 83388422 83388476 -167299378 + L3 LINE CR1 1414 1468 -109 5502 170 47 14 chr2 83390078 83392055 -167295799 - L1PA16 LINE L1 -1 6165 4127 1137 187 109 27 chr2 83392347 83392705 -167295149 - MSTC LTR MaLR 0 428 1 316 286 20 20 chr2 83393282 83393380 -167294474 - L2 LINE L2 0 3272 3175 460 244 102 73 chr2 83393709 83393983 -167293871 + L2 LINE L2 3029 3310 -3 2394 86 0 0 chr2 83395703 83396007 -167291847 + AluY SINE Alu 6 309 -2 213 296 19 0 chr2 83396444 83396498 -167291356 + MIR SINE MIR 45 99 -163 2043 129 20 32 chr2 83397487 83397828 -167290026 + MER1B DNA MER1_type 1 337 0 7259 35 6 3 chr2 83398725 83400180 -167287674 - L1PA3 LINE L1 0 6155 4715 422 333 103 0 chr2 83400233 83400398 -167287456 - MIR3 SINE MIR -12 196 15 341 270 30 0 chr2 83400450 83400550 -167287304 - MIR SINE MIR -48 214 112 189 305 135 28 chr2 83401317 83401458 -167286396 + MIR SINE MIR 80 235 -27 22 35 0 0 chr2 83402013 83402042 -167285812 + AT_rich Low_complexity Low_complexity 1 29 0 290 264 146 16 chr2 83402498 83402744 -167285110 - L1MEd LINE L1 -5079 1040 763 561 354 101 67 chr2 83402767 83403429 -167284425 - L1MEd LINE L1 -5416 703 19 419 254 18 0 chr2 83403518 83403632 -167284222 + AluJo/FLAM SINE Alu 1 116 -196 2457 43 0 17 chr2 83403632 83403933 -167283921 - AluY SINE Alu -15 296 1 416 169 28 0 chr2 83403975 83404046 -167283808 - AluSg/x SINE Alu -26 284 212 203 333 26 0 chr2 83404049 83404127 -167283727 - MIR SINE MIR -148 114 35 1305 226 192 46 chr2 83404774 83405403 -167282451 - Charlie7 DNA MER1_type -1890 722 2 538 236 29 23 chr2 83405948 83406122 -167281732 - MER104 DNA Tc2 -3 177 3 2251 97 0 3 chr2 83408647 83408945 -167278909 + AluSx SINE Alu 2 298 -14 324 317 50 0 chr2 83409050 83409170 -167278684 + MER5A DNA MER1_type 64 189 0 361 242 88 0 chr2 83409219 83409310 -167278544 - MER5A DNA MER1_type -90 99 1 183 360 48 41 chr2 83410440 83410587 -167277267 + L2 LINE L2 2768 2915 -399 192 125 0 0 chr2 83410652 83410684 -167277170 + (T)n Simple_repeat Simple_repeat 1 32 0 499 32 0 0 chr2 83411145 83411207 -167276647 - L1PB4 LINE L1 -12 6144 6083 2218 107 41 6 chr2 83411586 83411924 -167275930 - L1PA13 LINE L1 -1 6162 5813 389 276 8 0 chr2 83413017 83413140 -167274714 - L1M4 LINE L1 -1567 4579 4456 348 329 68 21 chr2 83413255 83413492 -167274362 - L1M4 LINE L1 -1824 4322 4075 2289 120 0 0 chr2 83415104 83415413 -167272441 - AluSq SINE Alu -3 310 2 4419 172 49 21 chr2 83416697 83416729 -167271125 - L1MB2 LINE L1 -14 6157 6127 2215 105 3 10 chr2 83416729 83417043 -167270811 + AluSx SINE Alu 1 312 0 4419 172 49 21 chr2 83417043 83417995 -167269859 - L1MB2 LINE L1 -44 6127 5142 249 360 261 29 chr2 83418225 83418539 -167269315 + L2 LINE L2 2886 3272 0 351 305 8 0 chr2 83418941 83419059 -167268795 - L1MA10 LINE L1 -18 6316 6198 22 35 0 0 chr2 83420314 83420343 -167267511 + AT_rich Low_complexity Low_complexity 1 29 0 2521 173 26 7 chr2 83420457 83420914 -167266940 - LTR32 LTR ERVL 0 471 6 223 295 114 7 chr2 83421248 83421388 -167266466 + MIR SINE MIR 39 191 -71 25 0 0 0 chr2 83421438 83421463 -167266391 + AT_rich Low_complexity Low_complexity 1 25 0 770 210 24 0 chr2 83421840 83422007 -167265847 + MER5B DNA MER1_type 2 172 -6 763 114 0 0 chr2 83422161 83422266 -167265588 + AluY SINE Alu 1 105 -206 22 35 0 0 chr2 83423299 83423328 -167264526 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 83423627 83423649 -167264205 + AT_rich Low_complexity Low_complexity 1 22 0 314 310 107 25 chr2 83426326 83426523 -167261331 - L1ME LINE L1 -333 5829 5617 244 237 17 0 chr2 83426731 83426790 -167261064 - L1ME LINE L1 -594 5576 5517 732 271 190 23 chr2 83426885 83427460 -167260394 - L1ME LINE L1 -747 5399 4729 324 0 0 0 chr2 83428049 83428085 -167259769 + (T)n Simple_repeat Simple_repeat 1 36 0 1645 106 0 0 chr2 83428104 83428312 -167259542 - AluSc SINE Alu -101 208 1 1130 242 25 11 chr2 83428856 83429133 -167258721 - MLT1C LTR MaLR 0 467 187 715 183 0 22 chr2 83429140 83429277 -167258577 - AluJb SINE Alu -4 308 175 855 184 29 17 chr2 83429279 83429453 -167258401 - MLT1C LTR MaLR -287 180 5 3161 102 9 2 chr2 83429460 83429901 -167257953 - MLT2A1 LTR ERVL 0 444 1 226 257 14 14 chr2 83431283 83431353 -167256501 + (CTA)n Simple_repeat Simple_repeat 2 71 0 247 241 11 69 chr2 83431355 83431442 -167256412 - MIR SINE MIR -15 247 166 333 306 62 32 chr2 83431520 83432008 -167255846 - L1MEd LINE L1 -863 1627 1037 664 290 91 9 chr2 83482494 83482725 -167205129 + MIR SINE MIR 13 262 0 210 143 0 0 chr2 83482756 83482791 -167205063 + (CAT)n Simple_repeat Simple_repeat 3 37 0 198 0 0 0 chr2 83483378 83483400 -167204454 + (A)n Simple_repeat Simple_repeat 1 22 0 232 277 149 0 chr2 83483742 83483836 -167204018 - MER117 DNA MER1_type -51 146 39 317 269 44 75 chr2 83484543 83484703 -167203151 - MIR SINE MIR -55 207 53 1890 147 7 19 chr2 83485845 83486152 -167201702 + AluSx SINE Alu 1 303 -9 239 272 58 29 chr2 83486689 83486792 -167201062 + L2 LINE L2 3203 3308 -5 437 264 41 23 chr2 83488638 83488790 -167199064 + MIR SINE MIR 36 188 -55 225 331 289 0 chr2 83489398 83489519 -167198335 + MIR SINE MIR 16 171 -91 372 43 0 0 chr2 83489710 83489756 -167198098 + (TG)n Simple_repeat Simple_repeat 2 47 0 360 283 121 24 chr2 83489780 83489946 -167197908 - MIR SINE MIR -28 234 53 1812 130 3 62 chr2 83490595 83490902 -167196952 + AluJb SINE Alu 1 289 -23 221 222 0 48 chr2 83492301 83492364 -167195490 + MIR SINE MIR 160 219 -43 30 27 0 0 chr2 83492541 83492578 -167195276 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 83493072 83493101 -167194753 + AT_rich Low_complexity Low_complexity 1 29 0 30 100 0 0 chr2 83493583 83493683 -167194171 + AT_rich Low_complexity Low_complexity 1 100 0 21 0 0 0 chr2 83494414 83494435 -167193419 + AT_rich Low_complexity Low_complexity 1 21 0 21655 129 11 13 chr2 83494435 83498943 -167188911 - L1PA8A LINE L1 -13 6433 1946 5189 114 15 1 chr2 83498947 83499763 -167188091 - L1PA8A LINE L1 -5048 827 1 292 291 60 40 chr2 83502449 83502600 -167185254 + MIR3 SINE MIR 20 173 -35 2666 58 0 0 chr2 83503086 83503396 -167184458 + AluY SINE Alu 1 310 -1 474 110 0 0 chr2 83503441 83503514 -167184340 - AluJ/FRAM SINE Alu -10 302 230 3292 56 11 4 chr2 83503616 83504081 -167183773 - L1P LINE L1 -2492 3654 3187 372 220 37 164 chr2 83504255 83504469 -167183385 + MIR SINE MIR 76 262 0 1463 167 14 51 chr2 83506761 83507055 -167180799 - AluJo SINE Alu -29 283 1 1669 167 7 27 chr2 83508367 83508660 -167179194 + AluJo SINE Alu 1 287 -25 186 220 99 77 chr2 83509349 83509440 -167178414 + L2 LINE L2 1913 2005 -1309 409 184 21 43 chr2 83510140 83510281 -167177573 + A-rich Low_complexity Low_complexity 4 141 0 949 166 121 10 chr2 83511434 83511633 -167176221 - MER58A DNA MER1_type -2 222 2 223 340 28 35 chr2 83511642 83511783 -167176071 - L2 LINE L2 -555 2759 2620 549 309 116 40 chr2 83512853 83513225 -167174629 + L2 LINE L2 2837 3236 -77 35 63 0 0 chr2 83513236 83513299 -167174555 + AT_rich Low_complexity Low_complexity 1 63 0 246 174 23 12 chr2 83513316 83513402 -167174452 + (TA)n Simple_repeat Simple_repeat 1 87 0 246 163 0 0 chr2 83513958 83514001 -167173853 + Alu SINE Alu 87 129 -173 360 64 0 0 chr2 83514003 83514050 -167173804 + (TG)n Simple_repeat Simple_repeat 2 48 0 310 116 81 40 chr2 83514080 83514253 -167173601 + (TA)n Simple_repeat Simple_repeat 1 180 0 237 109 0 0 chr2 83514261 83514307 -167173547 + LTR66 LTR ERVL 394 439 -171 189 0 0 0 chr2 83514307 83514328 -167173526 + (TA)n Simple_repeat Simple_repeat 2 22 0 990 171 6 0 chr2 83514328 83514492 -167173362 + AluJb SINE Alu 145 309 -3 287 305 130 26 chr2 83514526 83514680 -167173174 - MIR SINE MIR -73 189 20 232 337 12 0 chr2 83516488 83516574 -167171280 - MIR3 SINE MIR -8 200 114 1571 212 10 0 chr2 83517126 83517418 -167170436 - AluJo SINE Alu -17 295 1 495 297 71 24 chr2 83517491 83517703 -167170151 + MIR SINE MIR 22 243 -19 207 0 0 0 chr2 83521151 83521174 -167166680 + (CA)n Simple_repeat Simple_repeat 2 24 0 326 221 11 0 chr2 83521174 83521269 -167166585 + (TATATG)n Simple_repeat Simple_repeat 1 96 0 180 0 0 0 chr2 83521344 83521364 -167166490 + (T)n Simple_repeat Simple_repeat 1 20 0 357 255 96 0 chr2 83521462 83521556 -167166298 + L2 LINE L2 3169 3271 -1 214 377 0 0 chr2 83522837 83522906 -167164948 + MIR SINE MIR 37 105 -103 2426 113 0 0 chr2 83523434 83523744 -167164110 + AluSg SINE Alu 1 310 0 248 258 184 49 chr2 83525091 83525254 -167162600 + MIR3 SINE MIR 8 192 -16 670 198 12 0 chr2 83526611 83526783 -167161071 + CT-rich Low_complexity Low_complexity 4 177 0 736 264 37 41 chr2 83526936 83527182 -167160672 + MIR SINE MIR 18 262 0 2147 137 13 0 chr2 83528013 83528360 -167159494 - AluSx SINE Alu 0 351 1 2239 99 3 0 chr2 83528927 83529211 -167158643 - AluSc SINE Alu -24 285 1 1886 110 4 4 chr2 83529229 83529484 -167158370 - AluSx SINE Alu -52 260 6 994 135 119 31 chr2 83529487 83529680 -167158174 - AluJo SINE Alu -18 294 85 2371 103 3 0 chr2 83529978 83530289 -167157565 - AluSp SINE Alu -1 312 1 497 301 28 56 chr2 83530642 83530858 -167156996 - MIR SINE MIR -16 246 37 263 146 62 0 chr2 83530878 83530926 -167156928 + MIR SINE MIR 188 238 -24 344 130 14 0 chr2 83531508 83531577 -167156277 + CT-rich Low_complexity Low_complexity 1 70 0 352 335 118 59 chr2 83533196 83533830 -167154024 + L2 LINE L2 2562 3264 -8 23 54 0 0 chr2 83534697 83534734 -167153120 + AT_rich Low_complexity Low_complexity 1 37 0 207 0 0 0 chr2 83535992 83536015 -167151839 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 351 361 57 9 chr2 83536136 83536366 -167151488 + MIR SINE MIR 2 242 -20 21 0 0 0 chr2 83536924 83536945 -167150909 + AT_rich Low_complexity Low_complexity 1 21 0 313 349 47 0 chr2 83539006 83539135 -167148719 - L2 LINE L2 -2 3311 3177 383 213 37 9 chr2 83539230 83539338 -167148516 - MLT1K LTR MaLR -27 561 451 741 198 44 6 chr2 83539954 83540136 -167147718 - MER20 DNA MER1_type -17 202 14 366 156 0 0 chr2 83540183 83540247 -167147607 + (TG)n Simple_repeat Simple_repeat 2 65 0 4311 185 32 21 chr2 83541273 83542127 -167145727 + MER21B LTR ERV1 1 863 0 766 231 151 83 chr2 83542386 83542818 -167145036 + L2 LINE L2 2853 3313 0 289 148 0 159 chr2 83543208 83543296 -167144558 - MIR SINE MIR -107 155 82 671 249 0 6 chr2 83543298 83543475 -167144379 + MER65A LTR ERV1 1 176 -269 1358 165 23 0 chr2 83543584 83543845 -167144009 + MER65A LTR ERV1 179 445 0 348 239 43 28 chr2 83545296 83545450 -167142404 + MLT1H1 LTR MaLR 29 177 -365 308 302 183 51 chr2 83545490 83545725 -167142129 + MLT1H1 LTR MaLR 317 582 -13 401 269 113 16 chr2 83545780 83545966 -167141888 + MIR SINE MIR 34 237 -25 365 322 69 23 chr2 83548308 83548482 -167139372 + MIR SINE MIR 2 183 -79 608 138 0 60 chr2 83548800 83548916 -167138938 - AluJb SINE Alu -179 133 25 249 217 0 101 chr2 83549127 83549196 -167138658 + MLT1I LTR MaLR 224 285 -124 2504 194 54 2 chr2 83549243 83549795 -167138059 - L1MB5 LINE L1 0 6174 5594 333 360 67 0 chr2 83549896 83550074 -167137780 - L2 LINE L2 -570 2744 2555 383 251 142 90 chr2 83550137 83550348 -167137506 + L3 LINE CR1 1343 1564 -13 1989 132 0 21 chr2 83550686 83551094 -167136760 + AluSx SINE Alu 1 402 0 21 36 0 0 chr2 83551734 83551762 -167136092 + AT_rich Low_complexity Low_complexity 1 28 0 484 139 70 15 chr2 83552080 83552192 -167135662 - L1MA9 LINE L1 -281 6019 5907 538 221 35 0 chr2 83552223 83552336 -167135518 + MER5C DNA MER1_type 4 120 -204 211 314 14 0 chr2 83553001 83553071 -167134783 + GA-rich Low_complexity Low_complexity 4 74 0 307 316 166 5 chr2 83553993 83554180 -167133674 - MIR SINE MIR -11 251 35 2357 93 0 0 chr2 83554185 83554486 -167133368 - AluSx SINE Alu -11 301 1 241 91 455 0 chr2 83555008 83555063 -167132791 + MADE1 DNA Mariner 1 80 0 227 246 93 75 chr2 83555164 83555285 -167132569 - MIR SINE MIR -63 145 28 540 347 79 1 chr2 83555843 83556084 -167131770 - MIR SINE MIR 0 262 15 441 157 81 0 chr2 83556087 83556202 -167131652 - L1MC4 LINE L1 0 8042 6241 443 252 46 8 chr2 83557463 83557594 -167130260 - MER69A DNA AcHobo -22 155 20 787 253 106 17 chr2 83558191 83558595 -167129259 + MER113 DNA MER1_type? 38 477 -44 193 295 152 9 chr2 83558713 83558825 -167129029 + MIR SINE MIR 94 221 -41 1889 102 4 0 chr2 83560542 83560786 -167127068 + AluSp SINE Alu 1 245 -68 212 75 0 25 chr2 83560792 83560832 -167127022 + (CAAAC)n Simple_repeat Simple_repeat 1 39 0 1501 156 11 4 chr2 83561430 83561700 -167126154 - MER47A DNA MER2_type -91 275 4 2042 158 0 0 chr2 83562352 83562650 -167125204 - AluSx SINE Alu -14 298 1 583 282 43 5 chr2 83562793 83562981 -167124873 - MIR SINE MIR -36 226 32 304 279 48 10 chr2 83562987 83563091 -167124763 - MIR SINE MIR -71 137 30 1945 143 0 0 chr2 83563665 83563937 -167123917 + AluSq SINE Alu 1 272 -41 320 237 32 43 chr2 83564848 83564941 -167122913 - L2 LINE L2 -2 3270 3179 1848 156 7 0 chr2 83565757 83566071 -167121783 - AluJo SINE Alu 0 316 1 193 357 48 12 chr2 83566386 83566470 -167121384 - L2 LINE L2 -18 3254 3168 239 331 138 75 chr2 83566485 83566805 -167121049 - L2 LINE L2 0 3272 2933 414 292 42 0 chr2 83566856 83566976 -167120878 - MIR3 SINE MIR -47 161 37 218 347 0 0 chr2 83568769 83568844 -167119010 + L2 LINE L2 3238 3312 -1 589 186 51 8 chr2 83569141 83569259 -167118595 + MIR SINE MIR 111 233 -29 2314 64 0 0 chr2 83569420 83569751 -167118103 + AluY SINE Alu 2 332 0 1650 188 0 33 chr2 83570219 83570522 -167117332 + AluJo SINE Alu 2 294 -18 181 283 19 19 chr2 83571927 83571980 -167115874 + MER5B DNA MER1_type 2 54 -124 250 227 0 0 chr2 83572024 83572068 -167115786 - MER5B DNA MER1_type -130 48 5 1968 137 7 0 chr2 83572116 83572400 -167115454 + AluSx SINE Alu 2 287 -25 303 71 0 0 chr2 83572404 83572446 -167115408 + (TAAAA)n Simple_repeat Simple_repeat 2 43 0 199 291 29 10 chr2 83572687 83572790 -167115064 + L2 LINE L2 2893 2997 -275 563 167 9 0 chr2 83573161 83573269 -167114585 + L1MB7 LINE L1 6068 6176 -8 658 220 156 0 chr2 83573445 83573618 -167114236 + MER58A DNA MER1_type 24 223 -1 225 327 234 10 chr2 83574341 83574546 -167113308 + MIR SINE MIR 12 262 0 624 151 137 14 chr2 83574693 83574832 -167113022 - THE1C LTR MaLR -219 156 1 352 188 145 0 chr2 83576132 83576201 -167111653 - AluJ SINE Alu -25 277 199 1065 153 0 24 chr2 83576202 83576372 -167111482 - AluJ SINE Alu -146 166 1 234 0 0 0 chr2 83577401 83577427 -167110427 + (T)n Simple_repeat Simple_repeat 1 26 0 206 263 228 18 chr2 83577516 83577630 -167110224 - L3 LINE CR1 -3 1574 1437 230 347 20 41 chr2 83577698 83577796 -167110058 + MIR SINE MIR 53 148 -114 430 282 124 50 chr2 83577802 83578284 -167109570 + LTR33 LTR ERVL 1 518 -3 548 321 83 21 chr2 83578492 83578732 -167109122 - L3 LINE CR1 -304 1273 1019 1855 175 47 76 chr2 83578796 83579311 -167108543 + MLT1D LTR MaLR 6 505 0 246 420 51 0 chr2 83579322 83579579 -167108275 - L3 LINE CR1 -756 821 552 656 159 62 55 chr2 83579608 83579753 -167108101 - AluJb SINE Alu -5 307 162 2712 29 0 0 chr2 83582099 83582407 -167105447 + AluY SINE Alu 1 308 -3 32 57 0 0 chr2 83582932 83582985 -167104869 + AT_rich Low_complexity Low_complexity 1 53 0 192 237 0 34 chr2 83583030 83583089 -167104765 - L2 LINE L2 -1063 2251 2195 454 262 73 31 chr2 83583393 83583506 -167104348 - L1ME4a LINE L1 -56 6065 5958 318 26 0 0 chr2 83583506 83583545 -167104309 + (CA)n Simple_repeat Simple_repeat 2 40 0 454 262 73 31 chr2 83583545 83583717 -167104137 - L1ME4a LINE L1 -163 5958 5768 498 33 0 0 chr2 83584732 83584792 -167103062 + (TCCCC)n Simple_repeat Simple_repeat 5 64 0 481 133 0 92 chr2 83584792 83584890 -167102964 - AluY SINE Alu -17 294 206 1290 236 231 40 chr2 83585299 83585919 -167101935 - LTR41 LTR ERVL -12 761 24 398 338 127 42 chr2 83586018 83586468 -167101386 - L2 LINE L2 -340 2974 2487 642 281 37 37 chr2 83586506 83586752 -167101102 + MIR SINE MIR 2 247 -15 205 284 78 29 chr2 83587352 83587454 -167100400 + L2 LINE L2 3166 3272 0 2311 60 0 0 chr2 83587465 83587774 -167100080 - AluY SINE Alu 0 309 1 575 317 6 11 chr2 83588570 83588750 -167099104 - MIR SINE MIR -56 206 28 393 89 30 40 chr2 83589089 83589190 -167098664 + (TCTA)n Simple_repeat Simple_repeat 1 100 0 289 328 5 15 chr2 83592163 83592276 -167095578 + G-rich Low_complexity Low_complexity 1 193 0 1918 108 58 71 chr2 83592325 83592704 -167095150 - THE1C LTR MaLR -1 374 1 236 276 52 0 chr2 83592943 83593001 -167094853 - L2 LINE L2 -5 3267 3207 1461 215 18 24 chr2 83593191 83593521 -167094333 - MLT2B3 LTR ERVL -226 328 1 281 272 25 0 chr2 83593561 83593642 -167094212 - L2 LINE L2 -1047 2267 2185 269 219 86 38 chr2 83593724 83593829 -167094025 - L1ME4a LINE L1 -38 6083 5974 238 250 94 52 chr2 83593855 83594047 -167093807 - L1ME4a LINE L1 -201 5920 5721 200 330 51 34 chr2 83594933 83595051 -167092803 + MIR3 SINE MIR 8 127 -81 254 283 87 29 chr2 83595061 83595234 -167092620 - L2 LINE L2 -10 3303 3121 1235 188 44 58 chr2 83595371 83595664 -167092190 + AluJo SINE Alu 1 289 -23 654 309 116 50 chr2 83600253 83600975 -167086879 - L2 LINE L2 -1 3312 2534 346 314 0 0 chr2 83601202 83601326 -167086528 - AluJb SINE Alu -178 124 1 199 286 132 63 chr2 83601328 83601517 -167086337 - L2 LINE L2 -601 2713 2512 295 279 110 0 chr2 83603748 83603900 -167083954 + MIR SINE MIR 83 256 -6 1801 209 11 0 chr2 83604925 83605284 -167082570 - MLT1A1 LTR MaLR 0 365 3 209 191 0 0 chr2 83606833 83606875 -167080979 + (CAGA)n Simple_repeat Simple_repeat 3 44 0 303 351 63 31 chr2 83606938 83607129 -167080725 - L3 LINE CR1 -1 1576 1380 223 226 65 129 chr2 83607384 83607539 -167080315 + L2 LINE L2 2619 2763 -551 213 355 26 0 chr2 83608075 83608151 -167079703 + L2 LINE L2 2259 2336 -978 896 71 0 8 chr2 83608200 83608326 -167079528 + (TTC)n Simple_repeat Simple_repeat 2 126 0 277 264 104 60 chr2 83608453 83608635 -167079219 + L2 LINE L2 2554 2743 -571 238 197 248 17 chr2 83608983 83609100 -167078754 + L2 LINE L2 3163 3306 -7 21 0 0 0 chr2 83609898 83609919 -167077935 + AT_rich Low_complexity Low_complexity 1 21 0 334 252 0 81 chr2 83610004 83610115 -167077739 - MER58 DNA MER1_type -2315 105 4 1762 193 0 7 chr2 83610210 83610506 -167077348 + AluJb SINE Alu 1 294 -18 377 281 37 44 chr2 83611704 83611839 -167076015 - MIR SINE MIR -37 225 92 416 176 118 25 chr2 83611952 83612071 -167075783 - MSTC LTR MaLR -298 130 1 2264 113 0 10 chr2 83612129 83612439 -167075415 - AluSg SINE Alu -3 307 1 262 324 153 0 chr2 83612499 83612610 -167075244 + MIR SINE MIR 20 147 -115 1308 118 0 0 chr2 83614758 83614961 -167072893 + L1MA3 LINE L1 6103 6305 0 23 0 0 0 chr2 83614961 83614984 -167072870 + AT_rich Low_complexity Low_complexity 1 23 0 248 321 45 18 chr2 83616239 83616351 -167071503 + MIR SINE MIR 1 115 -147 2347 104 0 0 chr2 83616620 83616929 -167070925 - AluSg SINE Alu -1 309 1 789 248 64 0 chr2 83616930 83617132 -167070722 - MER58A DNA MER1_type -9 215 1 287 380 60 41 chr2 83617142 83617555 -167070299 + L2 LINE L2 2433 2853 -461 420 286 134 37 chr2 83617558 83617939 -167069915 - LTR16B LTR ERVL 0 464 47 326 312 83 99 chr2 83618073 83618528 -167069326 + L2 LINE L2 2825 3272 0 2843 146 27 1 chr2 83618547 83619457 -167068397 + L1P4 LINE L1 4750 5683 -478 186 103 0 0 chr2 83620954 83620983 -167066871 + (TCCA)n Simple_repeat Simple_repeat 4 32 0 277 218 307 0 chr2 83620991 83621092 -167066762 - L2 LINE L2 0 3313 3182 369 369 27 19 chr2 83621227 83621487 -167066367 - L2 LINE L2 -643 2671 2410 216 297 14 27 chr2 83623913 83623987 -167063867 + MIR3 SINE MIR 11 83 -125 216 0 0 0 chr2 83624386 83624410 -167063444 + (CAG)n Simple_repeat Simple_repeat 2 25 0 191 329 110 58 chr2 83624971 83625126 -167062728 + MIR SINE MIR 20 182 -80 323 258 65 0 chr2 83625408 83625501 -167062353 + MER103 DNA DNA 57 155 -11 467 311 122 11 chr2 83625772 83625952 -167061902 - MIR SINE MIR -6 256 57 321 26 0 0 chr2 83625970 83626008 -167061846 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 2025 114 19 0 chr2 83626018 83626289 -167061565 - AluSg SINE Alu -30 280 5 260 372 0 0 chr2 83626566 83626644 -167061210 + MER91A DNA MER1_type 119 196 0 304 329 0 0 chr2 83627682 83627758 -167060096 - MIR SINE MIR -136 126 51 432 57 0 0 chr2 83627801 83627854 -167060000 - AluSp SINE Alu -197 116 64 322 310 35 0 chr2 83628429 83628542 -167059312 + MIR SINE MIR 91 207 -55 540 296 41 6 chr2 83629931 83630100 -167057754 + MIR SINE MIR 32 206 -56 24 32 0 0 chr2 83630882 83630913 -167056941 + AT_rich Low_complexity Low_complexity 1 31 0 273 29 0 0 chr2 83631015 83631049 -167056805 + (TG)n Simple_repeat Simple_repeat 2 35 0 201 111 56 0 chr2 83631049 83631085 -167056769 + (CAGAGA)n Simple_repeat Simple_repeat 1 38 0 402 318 60 60 chr2 83631180 83631397 -167056457 + MIR SINE MIR 21 237 -25 1507 184 64 0 chr2 83631631 83631898 -167055956 - AluJo SINE Alu -26 286 3 335 125 56 14 chr2 83631974 83632046 -167055808 + MADE1 DNA Mariner 1 75 -5 181 56 28 28 chr2 83632928 83632964 -167054890 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 278 387 81 0 chr2 83633331 83633517 -167054337 + L2 LINE L2 3070 3270 -2 1153 217 5 9 chr2 83633787 83634008 -167053846 - MER58A DNA MER1_type -3 221 2 1687 178 17 20 chr2 83634185 83634477 -167053377 + AluJo SINE Alu 6 296 -16 283 340 53 33 chr2 83635194 83635344 -167052510 - MIR3 SINE MIR -11 197 45 24 67 0 0 chr2 83635476 83635521 -167052333 + AT_rich Low_complexity Low_complexity 1 45 0 315 275 29 101 chr2 83638466 83638604 -167049250 + L2 LINE L2 3185 3312 -1 332 303 0 0 chr2 83638698 83638787 -167049067 + L1MC4 LINE L1 6615 6703 -1339 186 133 0 0 chr2 83638788 83638818 -167049036 + (TA)n Simple_repeat Simple_repeat 1 30 0 620 209 22 14 chr2 83638832 83638971 -167048883 - MER5B DNA MER1_type -30 148 9 268 290 76 35 chr2 83639148 83639293 -167048561 + MIR SINE MIR 68 218 -44 21 36 0 0 chr2 83639293 83639321 -167048533 + AT_rich Low_complexity Low_complexity 1 28 0 382 297 123 0 chr2 83639654 83639792 -167048062 - MER63A DNA MER1_type -5 205 51 2315 88 0 16 chr2 83639792 83640098 -167047756 + AluY SINE Alu 1 301 -10 2028 143 3 20 chr2 83640191 83640541 -167047313 - MER2 DNA MER2_type 0 344 1 2190 105 0 56 chr2 83642291 83642615 -167045239 - AluJb SINE Alu -4 308 3 1275 121 105 8 chr2 83642894 83643142 -167044712 - L1MA8 LINE L1 -3 6288 6017 341 382 21 0 chr2 83643521 83643707 -167044147 - L2 LINE L2 -18 3295 3106 694 191 14 21 chr2 83643781 83643922 -167043932 + FLAM_C SINE Alu 1 140 -3 227 339 90 28 chr2 83644007 83644184 -167043670 - L2 LINE L2 -394 2920 2733 198 270 202 0 chr2 83645005 83645094 -167042760 - L2 LINE L2 -15 3298 3192 2610 43 0 0 chr2 83645103 83645406 -167042448 + AluY SINE Alu 1 303 -8 333 325 46 7 chr2 83645624 83645775 -167042079 - L2 LINE L2 -193 3079 2923 1677 211 88 77 chr2 83645776 83646644 -167041210 - LTR1B LTR ERV1 -1 1019 1 924 276 61 49 chr2 83647167 83647595 -167040259 - L2 LINE L2 -49 3264 2832 245 278 37 65 chr2 83647957 83648065 -167039789 - MIR3 SINE MIR -1 207 103 638 295 94 85 chr2 83648169 83648925 -167038929 - L2 LINE L2 -15 3298 2537 1890 155 0 19 chr2 83648983 83649299 -167038555 + AluJo SINE Alu 2 311 -1 1527 228 79 45 chr2 83649833 83650316 -167037538 + MLT1D LTR MaLR 7 505 0 204 135 0 0 chr2 83650437 83650474 -167037380 + (CTA)n Simple_repeat Simple_repeat 2 38 0 197 238 24 0 chr2 83650478 83650520 -167037334 - MIR SINE MIR -18 244 202 198 0 0 0 chr2 83650938 83650960 -167036894 + (T)n Simple_repeat Simple_repeat 1 22 0 467 310 106 4 chr2 83652025 83652459 -167035395 + L1ME LINE L1 5212 5704 -417 2011 132 53 31 chr2 83652578 83652934 -167034920 - THE1B LTR MaLR 0 364 1 2334 97 3 0 chr2 83654168 83654468 -167033386 + AluSc SINE Alu 1 301 -8 1603 158 16 54 chr2 83654580 83654896 -167032958 + AluJb SINE Alu 3 306 -6 425 352 70 25 chr2 83655041 83655481 -167032373 + L1MC4a LINE L1 4782 5241 -905 1077 256 42 94 chr2 83655567 83655642 -167032212 + L1MC4a LINE L1 5327 5404 -2404 2296 105 0 0 chr2 83655642 83655947 -167031907 - AluSx SINE Alu -3 309 5 1077 256 42 94 chr2 83655947 83656530 -167031324 + L1MC4a LINE L1 5404 5951 -1857 459 328 37 5 chr2 83656533 83656722 -167031132 + MIR SINE MIR 40 234 -28 394 367 41 14 chr2 83657101 83657319 -167030535 + L3 LINE CR1 246 469 -1108 1779 161 3 46 chr2 83657612 83657935 -167029919 + AluJo SINE Alu 4 312 0 327 25 0 0 chr2 83658107 83658147 -167029707 + (TG)n Simple_repeat Simple_repeat 1 40 0 270 0 0 0 chr2 83658146 83658176 -167029678 + (GA)n Simple_repeat Simple_repeat 1 30 0 * 284 204 151 11 chr2 83658934 83659027 -167028827 + MIR SINE MIR 156 261 -1 1074 82 0 0 chr2 83659736 83659871 -167027983 + AluSq/x SINE Alu 1 135 -178 1905 105 36 11 chr2 83659871 83660181 -167027673 + AluSx SINE Alu 1 317 0 401 245 43 0 chr2 83661655 83661749 -167026105 - MIR SINE MIR -66 142 45 24 32 0 0 chr2 83661890 83661921 -167025933 + AT_rich Low_complexity Low_complexity 1 31 0 371 250 57 47 chr2 83662081 83662293 -167025561 + L1ME LINE L1 5589 5802 -319 26 74 0 0 chr2 83662353 83662407 -167025447 + AT_rich Low_complexity Low_complexity 1 54 0 23 0 0 0 chr2 83662558 83662581 -167025273 + AT_rich Low_complexity Low_complexity 1 23 0 2199 142 0 0 chr2 83663252 83663562 -167024292 - AluSx SINE Alu -2 310 1 210 91 0 0 chr2 83663570 83663603 -167024251 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 23 33 0 0 chr2 83663695 83663725 -167024129 + AT_rich Low_complexity Low_complexity 1 30 0 304 300 140 0 chr2 83663830 83663980 -167023874 + MER117 DNA MER1_type 1 171 -26 260 71 71 0 chr2 83664261 83664317 -167023537 + CT-rich Low_complexity Low_complexity 1 60 0 1130 117 6 0 chr2 83664317 83664496 -167023358 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2215 100 14 0 chr2 83664504 83664795 -167023059 - AluSx SINE Alu -17 295 1 243 366 97 1 chr2 83664913 83665060 -167022794 - MIR SINE MIR -60 148 23 207 171 0 0 chr2 83665196 83665231 -167022623 + (TG)n Simple_repeat Simple_repeat 1 35 0 592 262 141 51 chr2 83666281 83666613 -167021241 - MLT1H1 LTR MaLR -197 358 10 337 238 164 8 chr2 83668097 83668219 -167019635 - MIR SINE MIR -74 188 48 934 174 28 0 chr2 83668223 83668401 -167019453 - MER20 DNA MER1_type -36 183 1 816 211 14 14 chr2 83668490 83668698 -167019156 - MER3 DNA MER1_type -1 208 1 603 207 62 11 chr2 83669400 83669423 -167018431 + MER53 DNA DNA 1 21 -168 198 0 0 0 chr2 83669423 83669445 -167018409 + (CAA)n Simple_repeat Simple_repeat 2 23 0 603 207 62 11 chr2 83669445 83669600 -167018254 + MER53 DNA DNA 21 188 -1 227 352 63 42 chr2 83669838 83669980 -167017874 - L2 LINE L2 -5 3267 3123 184 292 0 0 chr2 83670329 83670377 -167017477 - L2 LINE L2 -569 2745 2698 340 280 145 47 chr2 83670518 83670732 -167017122 + MIR SINE MIR 2 236 -26 1503 171 0 81 chr2 83671988 83672323 -167015531 - AluJb SINE Alu 0 310 1 207 342 44 9 chr2 83673396 83673510 -167014344 - MIR3 SINE MIR -4 204 87 267 188 188 0 chr2 83674703 83674767 -167013087 - MIR SINE MIR -90 172 97 192 143 191 95 chr2 83674922 83674985 -167012869 - MER5A DNA MER1_type -80 109 41 23 33 0 0 chr2 83676246 83676276 -167011578 + AT_rich Low_complexity Low_complexity 1 30 0 1527 179 7 14 chr2 83676321 83676606 -167011248 - AluJo SINE Alu -9 303 21 377 310 96 36 chr2 83676755 83677058 -167010796 + MER102b DNA MER1_type 20 340 -1 821 275 102 71 chr2 83677268 83677748 -167010106 - MLT1J LTR MaLR -12 499 5 220 243 54 43 chr2 83679594 83679698 -167008156 - MIR SINE MIR -35 173 64 259 304 98 0 chr2 83679980 83680082 -167007772 - MIR3 SINE MIR -4 204 93 245 152 76 76 chr2 83680627 83680693 -167007161 + L2 LINE L2 3248 3313 0 549 296 156 15 chr2 83682103 83682437 -167005417 + LTR16A LTR ERVL 61 441 -9 270 187 49 81 chr2 83682459 83682582 -167005272 + L1ME4a LINE L1 5798 5916 -205 222 156 0 0 chr2 83683120 83683165 -167004689 + (TGAA)n Simple_repeat Simple_repeat 4 48 0 237 243 0 0 chr2 83683641 83683711 -167004143 - L1MB4 LINE L1 -2 6178 6109 2575 56 0 0 chr2 83684000 83684302 -167003552 - AluY SINE Alu -9 302 1 293 291 35 12 chr2 83684475 83684561 -167003293 + polypyrimidine Low_complexity Low_complexity 4 91 0 414 316 21 37 chr2 83685505 83685692 -167002162 - MER5A DNA MER1_type -4 185 2 571 302 81 54 chr2 83685739 83686222 -167001632 - MLT1H LTR MaLR -53 496 1 2246 97 17 0 chr2 83686661 83686949 -167000905 - AluSc SINE Alu -16 293 1 512 227 23 30 chr2 83687344 83687476 -167000378 + MLT1F LTR MaLR 1 131 -411 310 185 0 0 chr2 83687477 83687542 -167000312 - L1MA8 LINE L1 -978 5168 5104 * 5774 118 18 24 chr2 83687535 83688628 -166999226 + L1MA8 LINE L1 5163 6249 -42 23 33 0 0 chr2 83688694 83688724 -166999130 + AT_rich Low_complexity Low_complexity 1 30 0 1832 207 17 15 chr2 83688986 83689396 -166998458 + MLT1F LTR MaLR 130 540 -2 1551 221 33 41 chr2 83690239 83690689 -166997165 - MLT2B2 LTR ERVL 0 444 1 3470 184 45 8 chr2 83690689 83691424 -166996430 - ERVL-B2 LTR ERVL -7 5757 4996 1507 245 59 36 chr2 83691630 83691738 -166996116 - MLT1D LTR MaLR 0 505 401 1832 127 3 38 chr2 83691738 83692029 -166995825 + AluJb SINE Alu 16 296 -16 1507 245 59 36 chr2 83692029 83692414 -166995440 - MLT1D LTR MaLR -104 401 1 1678 247 67 27 chr2 83694487 83695009 -166992845 - LTR55 LTR ERV -5 543 1 369 0 0 0 chr2 83695028 83695069 -166992785 + (CA)n Simple_repeat Simple_repeat 1 41 0 377 265 105 6 chr2 83695077 83695239 -166992615 - L1ME4a LINE L1 -201 5920 5743 207 200 0 0 chr2 83696341 83696386 -166991468 + T-rich Low_complexity Low_complexity 1 45 0 701 267 71 25 chr2 83696593 83696833 -166991021 + MIR SINE MIR 2 252 -10 345 279 36 6 chr2 83696842 83697007 -166990847 + (CATATA)n Simple_repeat Simple_repeat 4 173 0 259 249 11 28 chr2 83696941 83697122 -166990732 + (TAA)n Simple_repeat Simple_repeat 3 180 0 * 1750 186 0 13 chr2 83697568 83697880 -166989974 - AluJo SINE Alu -4 308 1 1663 94 21 26 chr2 83698130 83698364 -166989490 + AluY SINE Alu 70 302 -9 1304 231 22 43 chr2 83698371 83698739 -166989115 + L1ME1 LINE L1 5454 5813 -351 804 153 0 0 chr2 83698764 83698882 -166988972 + FLAM_C SINE Alu 1 118 -25 233 73 0 24 chr2 83698885 83698926 -166988928 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 809 245 66 92 chr2 83698926 83699275 -166988579 + L1ME1 LINE L1 5824 6164 -19 181 301 82 14 chr2 83699409 83699482 -166988372 - L2 LINE L2 -2 3270 3193 202 269 292 6 chr2 83699588 83699759 -166988095 - L2 LINE L2 -166 3106 2887 240 93 37 19 chr2 83700015 83700069 -166987785 + T-rich Low_complexity Low_complexity 1 55 0 2190 60 7 4 chr2 83700830 83701213 -166986641 + AluY SINE Alu 1 384 0 971 251 16 0 chr2 83701476 83701723 -166986131 + L1M4 LINE L1 4642 4892 -1254 594 283 6 0 chr2 83701730 83701896 -166985958 + L1M4 LINE L1 4957 5123 -1023 231 36 0 0 chr2 83702246 83702274 -166985580 + (A)n Simple_repeat Simple_repeat 1 28 0 255 61 0 0 chr2 83702782 83702815 -166985039 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 290 165 13 0 chr2 83703029 83703108 -166984746 + CT-rich Low_complexity Low_complexity 1 80 0 229 267 13 67 chr2 83703629 83703704 -166984150 + L2 LINE L2 3202 3272 0 468 328 38 60 chr2 83705518 83705783 -166982071 - L3 LINE CR1 -1 1576 1318 613 332 87 13 chr2 83706391 83706771 -166981083 - MLT1I LTR MaLR 0 409 2 377 288 109 96 chr2 83707036 83707432 -166980422 + L3 LINE CR1 585 985 -592 223 365 78 17 chr2 83707832 83707947 -166979907 + MIR SINE MIR 8 129 -133 514 253 167 0 chr2 83708944 83709094 -166978760 - MER5A DNA MER1_type -6 183 9 189 107 0 0 chr2 83709157 83709185 -166978669 + (TC)n Simple_repeat Simple_repeat 2 29 0 202 336 50 21 chr2 83709511 83709651 -166978203 - MIR SINE MIR 0 262 119 537 68 0 0 chr2 83711444 83711518 -166976336 + (TG)n Simple_repeat Simple_repeat 1 74 0 215 363 169 0 chr2 83711986 83712146 -166975708 + L3 LINE CR1 1390 1576 -1 45130 40 1 1 chr2 83714299 83720452 -166967402 - L1PA4 LINE L1 0 6155 1 199 294 0 0 chr2 83720483 83720534 -166967320 + L3 LINE CR1 328 378 -1199 626 309 129 21 chr2 83720589 83720968 -166966886 + L3 LINE CR1 964 1383 -194 199 295 66 66 chr2 83721138 83721566 -166966288 - MER5A DNA MER1_type -34 155 34 252 240 93 78 chr2 83721151 83721224 -166966630 + MER5A DNA MER1_type 58 135 -54 2179 121 0 13 chr2 83721224 83721531 -166966323 - AluSx SINE Alu -9 303 1 252 240 93 78 chr2 83721531 83721586 -166966268 + MER5A DNA MER1_type 135 188 -1 329 206 0 0 chr2 83723153 83723216 -166964638 - LTR53 LTR ERVL -11 508 446 190 223 72 127 chr2 83723301 83723467 -166964387 + L2 LINE L2 3156 3312 -1 2024 123 3 11 chr2 83723792 83724109 -166963745 - AluSx SINE Alu 0 315 1 1382 241 43 61 chr2 83724427 83724822 -166963032 - MLT1B LTR MaLR -2 388 1 189 0 0 0 chr2 83725020 83725041 -166962813 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2074 103 4 0 chr2 83725044 83725315 -166962539 - AluSx SINE Alu -24 288 17 221 291 121 43 chr2 83725369 83725510 -166962344 + MIR SINE MIR 105 256 -6 1731 132 26 59 chr2 83726739 83727043 -166960811 + AluJo SINE Alu 1 294 -18 2746 162 219 113 chr2 83728366 83729286 -166958568 + LTR28 LTR ERV1 1 1017 -3 424 311 60 0 chr2 83729733 83729916 -166957938 - MER117 DNA MER1_type 0 197 4 2060 99 3 14 chr2 83730476 83730791 -166957063 + AluSc SINE Alu 1 312 0 496 326 40 11 chr2 83731268 83731443 -166956411 + MER91B DNA MER1_type 2 181 -9 200 294 71 47 chr2 83731658 83731743 -166956111 - MIR SINE MIR -156 106 20 3123 82 0 8 chr2 83732156 83732534 -166955320 - THE1C LTR MaLR 0 375 1 266 250 181 28 chr2 83732662 83732806 -166955048 + MIR3 SINE MIR 12 177 -31 1695 168 49 11 chr2 83732839 83733125 -166954729 - AluJo SINE Alu -15 297 1 283 299 36 58 chr2 83733210 83733347 -166954507 - L2 LINE L2 0 3272 3139 611 229 69 17 chr2 83733457 83733632 -166954222 + MER58 DNA MER1_type 26 209 -132 180 179 0 0 chr2 83733787 83733826 -166954028 + (CAT)n Simple_repeat Simple_repeat 1 39 0 1463 161 9 5 chr2 83734790 83735013 -166952841 + MER58A DNA MER1_type 1 224 0 194 306 0 0 chr2 83735451 83735500 -166952354 - L3b LINE CR1 -250 1333 1285 254 326 108 39 chr2 83737116 83737245 -166950609 + MIR SINE MIR 11 148 -114 995 223 5 29 chr2 83737358 83737564 -166950290 - MER58A DNA MER1_type -15 209 9 256 292 0 0 chr2 83737774 83737839 -166950015 + (TG)n Simple_repeat Simple_repeat 2 66 0 306 0 0 0 chr2 83738200 83738234 -166949620 + (TG)n Simple_repeat Simple_repeat 2 35 0 318 26 0 0 chr2 83738746 83738785 -166949069 + (TG)n Simple_repeat Simple_repeat 2 40 0 299 289 199 24 chr2 83739188 83739354 -166948500 - MIR SINE MIR -53 209 15 299 276 207 0 chr2 83740354 83740499 -166947355 - MLT1L LTR MaLR -88 527 353 462 267 37 52 chr2 83742542 83742733 -166945121 + MIR SINE MIR 49 236 -26 223 361 56 0 chr2 83742824 83742932 -166944922 - MIR3 SINE MIR -6 202 89 191 233 111 78 chr2 83743369 83743459 -166944395 - MER5A DNA MER1_type -28 161 69 583 201 11 0 chr2 83743478 83743652 -166944202 + CT-rich Low_complexity Low_complexity 1 176 0 364 324 80 0 chr2 83745622 83745798 -166942056 - MIR SINE MIR -39 223 34 458 280 24 24 chr2 83746843 83747011 -166940843 - MER117 DNA MER1_type -29 168 1 240 328 48 16 chr2 83747204 83747329 -166940525 + MIR SINE MIR 128 256 -6 192 40 0 0 chr2 83747757 83747782 -166940072 + (TC)n Simple_repeat Simple_repeat 2 26 0 699 142 0 0 chr2 83747882 83748002 -166939852 + (TCCC)n Simple_repeat Simple_repeat 1 120 0 810 253 182 60 chr2 83750362 83750746 -166937108 - LTR16B LTR ERVL -32 432 2 353 337 77 6 chr2 83750899 83751080 -166936774 - MIR SINE MIR -3 259 66 637 217 148 15 chr2 83752264 83752343 -166935511 + L1MD3 LINE L1 7765 7832 -163 1883 142 0 4 chr2 83752343 83752647 -166935207 - AluSx SINE Alu 0 312 10 637 217 148 15 chr2 83752647 83752769 -166935085 + L1MD3 LINE L1 7832 7994 -1 2318 93 0 0 chr2 83753096 83753385 -166934469 + AluSq SINE Alu 1 289 -24 315 200 38 76 chr2 83753988 83754093 -166933761 + L1MC5 LINE L1 7811 7911 -50 320 81 54 40 chr2 83754164 83754227 -166933627 - LTR37A LTR ERV1 0 426 363 1822 161 64 92 chr2 83754227 83754693 -166933161 + MLT1C LTR MaLR 1 453 -14 221 0 35 0 chr2 83754696 83754725 -166933129 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1355 211 54 23 chr2 83754725 83755075 -166932779 - LTR37A LTR ERV1 -65 361 1 491 249 64 29 chr2 83755187 83755360 -166932494 + MIR SINE MIR 84 262 0 185 279 0 0 chr2 83756958 83757001 -166930853 - L2 LINE L2 -31 3241 3199 191 339 103 40 chr2 83757251 83757475 -166930379 + MIR SINE MIR 2 239 -23 346 253 50 0 chr2 83757560 83757659 -166930195 + MIR3 SINE MIR 64 167 -41 382 320 8 0 chr2 83758584 83758706 -166929148 + L3 LINE CR1 1332 1454 -123 221 317 48 19 chr2 83759474 83759578 -166928276 + L2 LINE L2 2687 2793 -521 646 240 0 20 chr2 83759641 83759787 -166928067 + MIR SINE MIR 86 228 -34 239 330 38 38 chr2 83759810 83759916 -166927938 + L2 LINE L2 3137 3242 -30 * 359 321 82 8 chr2 83759914 83760048 -166927806 + MIR SINE MIR 9 152 -110 189 0 0 0 chr2 83762337 83762358 -166925496 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 4345 148 62 57 chr2 83762939 83763718 -166924136 + LTR39 LTR ERV1 1 783 0 1596 69 0 25 chr2 83763946 83764148 -166923706 - MER107 DNA MER1_type 0 197 1 789 93 9 9 chr2 83764215 83764323 -166923531 - MER107 DNA MER1_type -89 108 1 1391 200 38 7 chr2 83764594 83764884 -166922970 - L1MA7 LINE L1 -2 6289 5991 239 239 0 102 chr2 83766089 83766126 -166921728 - L2 LINE L2 -6 3307 3283 1416 174 5 0 chr2 83766126 83766344 -166921510 - MER20 DNA MER1_type 0 219 1 239 239 0 102 chr2 83766344 83766394 -166921460 - L2 LINE L2 -30 3283 3229 275 170 0 0 chr2 83766621 83766668 -166921186 - L2 LINE L2 -2 3311 3265 921 266 148 36 chr2 83767174 83767655 -166920199 + MLT1G1 LTR MaLR 6 585 -10 1834 80 3 145 chr2 83768010 83768233 -166919621 - AluSx SINE Alu 0 312 59 423 0 0 0 chr2 83768233 83768280 -166919574 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2178 120 0 0 chr2 83768280 83768563 -166919291 - AluSx SINE Alu -29 283 1 1834 80 3 145 chr2 83768563 83768676 -166919178 - AluSx SINE Alu -251 61 23 1519 184 0 37 chr2 83770313 83770612 -166917242 - AluJo SINE Alu 0 312 25 192 107 0 0 chr2 83770755 83770783 -166917071 + L2 LINE L2 3009 3036 -236 378 0 0 0 chr2 83771072 83771114 -166916740 + (CA)n Simple_repeat Simple_repeat 1 42 0 598 301 36 15 chr2 83775215 83775411 -166912443 + MIR SINE MIR 59 258 -4 288 269 50 71 chr2 83775907 83776089 -166911765 - MLT1I LTR MaLR 0 409 232 1562 206 86 3 chr2 83776096 83776480 -166911374 - Charlie1 DNA MER1_type 0 2761 2346 299 275 14 0 chr2 83776482 83776551 -166911303 - Charlie1 DNA MER1_type -2691 70 1 318 291 12 0 chr2 83776617 83776703 -166911151 - MLT1J1 LTR MaLR -290 156 70 614 191 184 7 chr2 83777262 83777409 -166910445 - MER5A DNA MER1_type -8 181 9 399 192 0 26 chr2 83779534 83779612 -166908242 - Charlie2 DNA MER1_type 0 2862 2787 1960 171 55 76 chr2 83779621 83779925 -166907929 - L1MD1 LINE L1 -19 6617 6308 2404 93 0 7 chr2 83779925 83780227 -166907627 + AluY SINE Alu 1 300 -11 1960 171 55 76 chr2 83780227 83780880 -166906974 - L1MD1 LINE L1 -328 6308 5708 1536 89 21 0 chr2 83780880 83781071 -166906783 - AluSx SINE Alu -117 195 1 4091 244 63 15 chr2 83781072 83782347 -166905507 - L1MD1 LINE L1 -936 5604 4269 1609 136 110 8 chr2 83782349 83782613 -166905241 - AluSx SINE Alu -21 291 1 24 0 0 0 chr2 83782624 83782648 -166905206 + AT_rich Low_complexity Low_complexity 1 24 0 342 300 0 9 chr2 83784516 83784626 -166903228 - L1MD1 LINE L1 -2275 4265 4157 4867 204 40 70 chr2 83784635 83786849 -166901005 - L1MD1 LINE L1 -3228 3312 1176 1359 268 149 2 chr2 83786928 83787350 -166900504 - L1MD1 LINE L1 -5764 776 293 2430 208 79 94 chr2 83787363 83788171 -166899683 + MER21B LTR ERV1 1 796 -67 834 175 180 19 chr2 83788194 83788405 -166899449 - L1MD1 LINE L1 -6244 296 52 363 98 0 0 chr2 83788428 83788479 -166899375 + MADE1 DNA Mariner 30 80 0 272 258 47 16 chr2 83788554 83788682 -166899172 - Charlie2a DNA MER1_type -1854 1008 877 239 279 72 9 chr2 83788679 83788790 -166899064 - Charlie2a DNA MER1_type -2465 317 200 * 499 256 0 118 chr2 83789942 83790137 -166897717 + MER5B DNA MER1_type 2 173 -5 823 283 29 0 chr2 83790224 83790464 -166897390 + MER115 DNA AcHobo 5 251 -442 562 211 55 80 chr2 83790669 83790868 -166896986 + MER115 DNA AcHobo 500 693 0 496 294 25 78 chr2 83791097 83791342 -166896512 + MIR SINE MIR 25 256 -6 354 23 0 0 chr2 83791487 83791530 -166896324 + (TC)n Simple_repeat Simple_repeat 2 44 0 255 31 0 0 chr2 83791529 83791561 -166896293 + (TG)n Simple_repeat Simple_repeat 1 32 0 * 218 344 86 0 chr2 83791867 83791960 -166895894 + L2 LINE L2 3167 3267 -5 211 143 24 24 chr2 83792060 83792102 -166895752 + (TGAA)n Simple_repeat Simple_repeat 2 43 0 206 273 73 0 chr2 83792176 83792231 -166895623 + MIR SINE MIR 106 164 -98 598 242 66 44 chr2 83792965 83793192 -166894662 - MLT1J LTR MaLR -275 236 5 582 232 155 7 chr2 83793781 83793869 -166893985 + MER5A DNA MER1_type 9 83 -106 2578 182 13 17 chr2 83793869 83794336 -166893518 - MLT1C LTR MaLR 0 467 3 582 232 155 7 chr2 83794336 83794402 -166893452 + MER5A DNA MER1_type 83 186 -3 234 258 16 16 chr2 83794525 83794587 -166893267 + L2 LINE L2 3210 3271 -1 352 313 125 25 chr2 83794692 83794932 -166892922 - LTR41 LTR ERVL 0 773 510 688 238 43 16 chr2 83795188 83795373 -166892481 - LTR41 LTR ERVL -583 190 1 451 363 135 26 chr2 83795904 83796730 -166891124 + L2 LINE L2 2311 3228 -44 220 86 29 0 chr2 83796802 83796837 -166891017 - L2 LINE L2 -6 3307 3272 1979 175 70 34 chr2 83796891 83797431 -166890423 - MLT2A2 LTR ERVL 0 554 1 33994 94 25 24 chr2 83797431 83800663 -166887191 - HERVL-A2 LTR ERVL 0 5654 2427 2516 75 0 0 chr2 83800663 83800970 -166886884 - AluY SINE Alu -4 307 1 33994 94 25 24 chr2 83800970 83802462 -166885392 - HERVL-A2 LTR ERVL -3227 2427 734 180 258 0 112 chr2 83802462 83802551 -166885303 - MER5A DNA MER1_type -95 94 16 33994 94 25 24 chr2 83802551 83803286 -166884568 - HERVL-A2 LTR ERVL -4920 734 1 1886 174 92 43 chr2 83803286 83803822 -166884032 - MLT2A2 LTR ERVL 0 554 1 400 298 42 68 chr2 83803833 83804142 -166883712 - L2 LINE L2 -115 3198 2898 225 289 36 24 chr2 83804518 83804601 -166883253 - MIR3 SINE MIR -21 187 104 234 0 0 0 chr2 83805182 83805208 -166882646 + (TG)n Simple_repeat Simple_repeat 2 27 0 345 289 35 14 chr2 83805218 83805360 -166882494 - MARNA DNA Mariner -191 395 251 198 0 0 0 chr2 83805362 83805384 -166882470 + (TAA)n Simple_repeat Simple_repeat 3 24 0 363 319 25 12 chr2 83805402 83805562 -166882292 + MARNA DNA Mariner 399 560 -26 1662 234 87 35 chr2 83806282 83806809 -166881045 - MLT1F1 LTR MaLR -15 552 6 288 276 20 31 chr2 83806865 83806963 -166880891 + MER103 DNA DNA 59 155 -11 2116 195 54 15 chr2 83809707 83810173 -166877681 - MLT1D LTR MaLR 0 505 22 2215 110 7 7 chr2 83810241 83810550 -166877304 - AluSx SINE Alu -3 309 1 200 106 21 43 chr2 83811045 83811092 -166876762 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 712 166 29 7 chr2 83811442 83811581 -166876273 - LTR32 LTR ERVL -11 460 319 225 182 73 0 chr2 83811583 83811638 -166876216 - LTR32 LTR ERVL -103 368 310 2004 166 22 0 chr2 83811638 83811958 -166875896 - LTR32 LTR ERVL -125 346 20 216 349 0 0 chr2 83812661 83812724 -166875130 - L2 LINE L2 -2 3270 3208 218 244 77 39 chr2 83813411 83813489 -166874365 - MIR3 SINE MIR -3 205 125 1978 110 48 3 chr2 83813815 83814106 -166873748 - AluSg SINE Alu -3 307 4 387 256 104 15 chr2 83814749 83814919 -166872935 - MIR SINE MIR -35 173 4 201 342 8 17 chr2 83814919 83815030 -166872824 + MIR3 SINE MIR 75 184 -24 42 20 0 0 chr2 83816025 83816074 -166871780 + AT_rich Low_complexity Low_complexity 1 49 0 232 171 0 0 chr2 83816129 83816170 -166871684 + L1MC4 LINE L1 6658 6698 -1344 203 309 128 0 chr2 83816315 83816409 -166871445 + L2 LINE L2 3199 3304 -9 500 183 12 0 chr2 83817096 83817178 -166870676 + AluJ/FLAM SINE Alu 2 84 -228 416 274 214 28 chr2 83818004 83818256 -166869598 + L2 LINE L2 2576 2874 -440 319 277 57 21 chr2 83818426 83818567 -166869287 + L2 LINE L2 3116 3261 -52 382 303 118 18 chr2 83818676 83818905 -166868949 - MIR SINE MIR 0 262 13 2301 123 0 0 chr2 83820197 83820507 -166867347 + AluSg SINE Alu 1 310 0 345 345 125 22 chr2 83821466 83821698 -166866156 - MIR SINE MIR -6 256 1 2126 117 0 0 chr2 83821816 83822130 -166865724 - AluSg SINE Alu 0 314 1 1154 193 93 60 chr2 83822239 83822571 -166865283 + MER2 DNA MER2_type 1 343 -1 2557 64 0 6 chr2 83822660 83822971 -166864883 - AluY SINE Alu -2 309 1 184 325 25 131 chr2 83823586 83823746 -166864108 - L2 LINE L2 -91 3181 3039 22 35 0 0 chr2 83823928 83823957 -166863897 + AT_rich Low_complexity Low_complexity 1 29 0 2281 138 25 19 chr2 83824126 83824488 -166863366 - THE1B LTR MaLR 0 364 1 12661 95 2 1 chr2 83824488 83826066 -166861788 - THE1B-int LTR MaLR 0 1580 1 2220 144 22 33 chr2 83826066 83826434 -166861420 - THE1B LTR MaLR 0 364 1 490 304 162 37 chr2 83828856 83829320 -166858534 - L2 LINE L2 -875 2439 1918 281 132 0 19 chr2 83829621 83829674 -166858180 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 2010 120 36 7 chr2 83830486 83830787 -166857067 - AluSx SINE Alu -2 310 1 335 89 18 0 chr2 83830888 83830944 -166856910 + (CA)n Simple_repeat Simple_repeat 1 57 0 261 299 55 8 chr2 83831162 83831289 -166856565 - L1ME4a LINE L1 -3 6118 5986 41180 70 5 9 chr2 83831510 83837675 -166850179 - L1PA5 LINE L1 0 6154 19 1278 205 92 21 chr2 83837729 83838056 -166849798 + MLT1A1 LTR MaLR 11 360 -5 1924 151 20 0 chr2 83838136 83838428 -166849426 - AluSx SINE Alu -14 298 1 449 280 8 17 chr2 83838640 83838776 -166849078 + MIR SINE MIR 31 145 -63 974 251 32 0 chr2 83839794 83840045 -166847809 + MIR SINE MIR 2 260 -2 194 33 67 0 chr2 83840378 83840408 -166847446 + GA-rich Low_complexity Low_complexity 2 33 0 23 54 0 0 chr2 83840696 83840733 -166847121 + AT_rich Low_complexity Low_complexity 1 37 0 192 93 37 19 chr2 83841269 83841323 -166846531 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 908 135 23 0 chr2 83841736 83841869 -166845985 + AluJo SINE Alu 1 136 -176 2060 113 0 3 chr2 83842159 83842479 -166845375 - AluSx SINE Alu 0 319 1 22 0 0 0 chr2 83843668 83843690 -166844164 + AT_rich Low_complexity Low_complexity 1 22 0 390 346 0 39 chr2 83843778 83843908 -166843946 - MIR3 SINE MIR -78 130 6 1912 87 4 0 chr2 83844628 83844870 -166842984 - AluSp SINE Alu -70 243 1 2304 107 0 3 chr2 83845732 83846041 -166841813 - AluY SINE Alu -3 308 1 199 356 20 40 chr2 83846291 83846440 -166841414 - L3 LINE CR1 -412 1165 1020 203 299 26 13 chr2 83847837 83847914 -166839940 - MER91B DNA MER1_type -112 78 1 228 247 53 80 chr2 83848558 83848708 -166839146 - MIR SINE MIR 0 262 117 1989 218 0 19 chr2 83849461 83849833 -166838021 - MLT1A1 LTR MaLR 0 365 1 242 122 0 0 chr2 83849842 83849883 -166837971 + MER7A DNA MER2_type 59 97 -249 1855 224 83 42 chr2 83850527 83851089 -166836765 - MER21B LTR ERV1 -136 727 98 1778 169 47 12 chr2 83851197 83851517 -166836337 + MER7A DNA MER2_type 18 346 0 810 183 0 0 chr2 83851549 83851686 -166836168 - FLAM_C SINE Alu 0 143 7 277 309 145 38 chr2 83851938 83852200 -166835654 + MLT1K LTR MaLR 281 570 -18 252 0 0 0 chr2 83852255 83852283 -166835571 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1903 124 0 50 chr2 83852285 83852583 -166835271 - AluSx SINE Alu -29 283 1 4946 162 41 15 chr2 83852752 83853627 -166834227 + MER4D LTR ERV1 1 898 -5 396 55 0 0 chr2 83853630 83853685 -166834169 + (T)n Simple_repeat Simple_repeat 1 55 0 1822 119 58 0 chr2 83855347 83855607 -166832247 - AluSx SINE Alu -16 296 22 589 240 97 36 chr2 83856095 83856291 -166831563 - MER58A DNA MER1_type 0 224 17 4072 98 6 6 chr2 83857104 83857652 -166830202 - L1PA14 LINE L1 -3 6158 5611 414 228 0 0 chr2 83857863 83857942 -166829912 - MLT1J1 LTR MaLR -359 87 9 254 254 0 0 chr2 83858605 83858660 -166829194 + Tigger5 DNA MER2_type 1 55 -2268 489 176 12 0 chr2 83858670 83858755 -166829099 + Tigger5 DNA MER2_type 2237 2322 -1 219 272 12 12 chr2 83860648 83860729 -166827125 + (TG)n Simple_repeat Simple_repeat 2 82 0 1407 158 110 47 chr2 83860745 83860926 -166826928 - MER44D DNA MER2_type -1882 609 441 2375 81 0 0 chr2 83860926 83861246 -166826608 + AluSq SINE Alu 1 320 0 1407 158 110 47 chr2 83861246 83861380 -166826474 - MER44D DNA MER2_type -2050 441 3 449 124 0 11 chr2 83862835 83862924 -166824930 + (TCTA)n Simple_repeat Simple_repeat 3 90 0 2069 218 60 63 chr2 83864561 83865226 -166822628 - L1ME1 LINE L1 -5 6161 5499 554 111 0 12 chr2 83865921 83866002 -166821852 - MADE1 DNA Mariner 0 80 1 2327 77 37 0 chr2 83867091 83867390 -166820464 - AluY SINE Alu -1 310 1 211 371 0 10 chr2 83868634 83868731 -166819123 + MIR3 SINE MIR 113 208 0 21 0 0 0 chr2 83870127 83870148 -166817706 + AT_rich Low_complexity Low_complexity 1 21 0 409 278 96 21 chr2 83870777 83870964 -166816890 - MIR SINE MIR -12 250 50 207 0 0 0 chr2 83871479 83871502 -166816352 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 270 0 0 0 chr2 83871501 83871531 -166816323 + (TG)n Simple_repeat Simple_repeat 2 31 0 447 290 136 42 chr2 83871547 83871878 -166815976 - L2 LINE L2 -967 2347 1986 412 260 62 14 chr2 83872048 83872194 -166815660 + MIR3 SINE MIR 54 206 -2 188 100 0 33 chr2 83873423 83873453 -166814401 + MIR SINE MIR 94 122 -140 * 284 388 7 20 chr2 83873430 83873577 -166814277 + L2 LINE L2 3127 3271 -1 286 353 29 7 chr2 83874443 83874582 -166813272 + MIR3 SINE MIR 29 170 -38 200 281 167 21 chr2 83875062 83875158 -166812696 + MIR SINE MIR 34 143 -65 249 284 30 0 chr2 83876120 83876187 -166811667 - MIR SINE MIR -93 115 47 208 225 0 84 chr2 83876544 83876615 -166811239 - MIR SINE MIR -74 188 124 263 291 45 30 chr2 83877869 83878003 -166809851 - L3 LINE CR1 -41 1536 1401 200 119 0 24 chr2 83878533 83878575 -166809279 + (TA)n Simple_repeat Simple_repeat 1 41 0 462 257 0 0 chr2 83879255 83879356 -166808498 + MER91B DNA MER1_type 7 107 -83 470 299 64 36 chr2 83881259 83881510 -166806344 - MIR SINE MIR 0 262 5 310 308 37 9 chr2 83882192 83882299 -166805555 - L2 LINE L2 -15 3257 3148 454 263 130 50 chr2 83883337 83883797 -166804057 - L1ME4a LINE L1 -9 6112 5616 201 243 0 0 chr2 83884197 83884267 -166803587 + (TAA)n Simple_repeat Simple_repeat 2 71 0 228 163 0 0 chr2 83884565 83884608 -166803246 - MIR SINE MIR -66 142 100 2033 131 0 7 chr2 83884634 83884931 -166802923 - AluSx SINE Alu -17 295 1 551 236 29 36 chr2 83884940 83885080 -166802774 - MER3 DNA MER1_type -70 139 1 2275 108 0 0 chr2 83886273 83886570 -166801284 - AluSx SINE Alu -15 297 1 182 306 88 74 chr2 83886572 83886788 -166801066 - L2 LINE L2 -569 2745 2527 306 297 68 17 chr2 83887130 83887248 -166800606 + MER5A DNA MER1_type 42 165 -24 864 193 83 0 chr2 83888172 83888353 -166799501 + MER105 DNA DNA 3 198 -6 254 319 41 128 chr2 83888760 83889026 -166798828 - L2 LINE L2 -32 3240 2998 292 238 16 0 chr2 83889672 83889735 -166798119 - MIR SINE MIR -115 147 84 2414 126 41 16 chr2 83890427 83890793 -166797061 + THE1C LTR MaLR 1 375 0 317 250 0 0 chr2 83891464 83891532 -166796322 + Charlie8 DNA MER1_type 1360 1427 -990 25 31 0 0 chr2 83892059 83892091 -166795763 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr2 83892135 83892160 -166795694 + AT_rich Low_complexity Low_complexity 1 25 0 2506 57 0 3 chr2 83892716 83893016 -166794838 - AluY SINE Alu -12 299 1 803 199 74 0 chr2 83893948 83894124 -166793730 - MER53 DNA DNA 0 189 1 34 0 0 0 chr2 83894433 83894467 -166793387 + AT_rich Low_complexity Low_complexity 1 34 0 1488 272 114 27 chr2 83894513 83895332 -166792522 + L2 LINE L2 2414 3313 0 258 32 0 0 chr2 83896994 83897025 -166790829 + (GA)n Simple_repeat Simple_repeat 2 32 0 451 231 16 115 chr2 83897480 83897662 -166790192 - MER21B LTR ERV1 -130 733 570 1191 279 80 69 chr2 83897700 83897725 -166790129 - MER21B LTR ERV1 -150 713 690 2247 141 36 113 chr2 83897725 83898193 -166789661 - MSTB1 LTR MaLR 0 432 1 1191 279 80 69 chr2 83898193 83898743 -166789111 - MER21B LTR ERV1 -173 690 132 180 0 0 0 chr2 83898847 83898867 -166788987 + (A)n Simple_repeat Simple_repeat 1 20 0 249 365 47 7 chr2 83899005 83899153 -166788701 - L3 LINE CR1 -112 1465 1312 497 323 91 9 chr2 83899304 83899536 -166788318 + MIR SINE MIR 12 262 0 607 271 158 22 chr2 83899574 83899847 -166788007 - MLT1H LTR MaLR -23 526 217 993 229 14 14 chr2 83900055 83900269 -166787585 + AluJb SINE Alu 78 291 -21 333 0 0 0 chr2 83900343 83900380 -166787474 + (TG)n Simple_repeat Simple_repeat 1 37 0 264 271 0 35 chr2 83900740 83900825 -166787029 + MIR3 SINE MIR 125 206 -2 218 286 103 56 chr2 83901218 83901344 -166786510 + MIR SINE MIR 76 207 -55 1292 224 0 0 chr2 83901899 83902127 -166785727 + Tigger7 DNA MER2_type 7 234 -471 499 220 10 30 chr2 83902128 83902228 -166785626 + Tigger7 DNA MER2_type 2382 2479 -8 613 206 89 11 chr2 83903762 83903942 -166783912 - L1MC5 LINE L1 -51 7910 7717 237 114 68 0 chr2 83904263 83904307 -166783547 + MST-int LTR MaLR 436 482 -1169 589 234 60 53 chr2 83904376 83904641 -166783213 + L1MC5 LINE L1 7403 7669 -292 578 134 151 0 chr2 83904619 83904738 -166783116 + L1MA5 LINE L1 6164 6300 0 * 329 284 46 0 chr2 83905096 83905205 -166782649 + GA-rich Low_complexity Low_complexity 5 118 0 183 364 59 17 chr2 83908093 83908211 -166779643 + L2 LINE L2 3096 3218 -54 384 332 130 5 chr2 83908839 83909047 -166778807 - MIR SINE MIR -1 261 28 29 0 0 0 chr2 83910498 83910527 -166777327 + AT_rich Low_complexity Low_complexity 1 29 0 228 298 76 47 chr2 83910878 83911049 -166776805 - MIR SINE MIR -7 255 80 332 299 71 58 chr2 83911336 83911490 -166776364 - MIR SINE MIR -41 221 66 700 176 23 60 chr2 83911827 83912068 -166775786 - MER106B DNA MER1_type 0 1059 1 225 196 0 0 chr2 83912097 83912148 -166775706 + GA-rich Low_complexity Low_complexity 3 53 0 273 290 20 30 chr2 83912634 83912734 -166775120 - MIR SINE MIR -70 138 40 614 243 114 35 chr2 83913462 83913664 -166774190 - MIR SINE MIR -10 252 35 294 253 44 76 chr2 83913687 83913845 -166774009 + MIR SINE MIR 85 237 -25 34 0 0 0 chr2 83914311 83914345 -166773509 + AT_rich Low_complexity Low_complexity 1 34 0 290 320 77 22 chr2 83915396 83915609 -166772245 + MIR SINE MIR 17 243 -19 904 186 17 17 chr2 83915878 83915931 -166771923 + MER5B DNA MER1_type 1 53 -125 183 42 0 0 chr2 83915931 83915955 -166771899 + (TAA)n Simple_repeat Simple_repeat 2 25 0 904 186 17 17 chr2 83915955 83916078 -166771776 + MER5B DNA MER1_type 52 177 -1 367 278 24 16 chr2 83916293 83916419 -166771435 + CT-rich Low_complexity Low_complexity 1 127 0 214 411 48 0 chr2 83916900 83917068 -166770786 - MIR3 SINE MIR -13 195 20 918 112 0 15 chr2 83917349 83917483 -166770371 - L1MA2 LINE L1 0 6304 6173 1023 213 19 19 chr2 83917982 83918198 -166769656 - MER20 DNA MER1_type 0 219 4 378 261 70 0 chr2 83918600 83918715 -166769139 + MIR SINE MIR 58 180 -82 207 188 0 0 chr2 83919251 83919299 -166768555 + (TG)n Simple_repeat Simple_repeat 1 48 0 248 282 24 0 chr2 83919313 83919398 -166768456 + (TA)n Simple_repeat Simple_repeat 1 87 0 450 0 0 0 chr2 83921571 83921621 -166766233 + (TG)n Simple_repeat Simple_repeat 2 51 0 21 71 0 0 chr2 83923177 83923219 -166764635 + AT_rich Low_complexity Low_complexity 1 42 0 201 132 73 15 chr2 83925898 83925966 -166761888 + (CGGG)n Simple_repeat Simple_repeat 4 75 0 207 0 0 0 chr2 83926195 83926218 -166761636 + (A)n Simple_repeat Simple_repeat 1 23 0 416 237 72 36 chr2 83927509 83927648 -166760206 - MIR3 SINE MIR -3 205 62 694 89 18 9 chr2 83927648 83927760 -166760094 + (TTTC)n Simple_repeat Simple_repeat 3 115 0 197 33 33 0 chr2 83928329 83928359 -166759495 + (TA)n Simple_repeat Simple_repeat 1 31 0 31 44 0 0 chr2 83930023 83930068 -166757786 + AT_rich Low_complexity Low_complexity 1 45 0 2311 99 0 29 chr2 83930083 83930396 -166757458 + AluSx SINE Alu 3 306 -6 269 275 197 8 chr2 83930784 83930927 -166756927 + MIR SINE MIR 37 206 -56 1249 92 0 0 chr2 83930981 83931144 -166756710 - AluSg/x SINE Alu -15 297 135 384 195 126 11 chr2 83931229 83931316 -166756538 + MER5A DNA MER1_type 9 105 -84 191 235 44 29 chr2 83931402 83931470 -166756384 - MIR SINE MIR -102 160 92 2140 82 0 4 chr2 83932006 83932274 -166755580 + AluSx SINE Alu 34 300 -12 428 280 116 53 chr2 83932377 83932602 -166755252 - L1ME LINE L1 -359 5762 5542 2884 151 14 63 chr2 83933363 83933947 -166753907 - LTR10A LTR ERV1 -54 555 1 280 146 21 0 chr2 83936235 83936283 -166751571 + MIR SINE MIR 64 112 -150 667 243 80 121 chr2 83936556 83937037 -166750817 - MLT1H LTR MaLR -22 527 22 551 221 131 0 chr2 83937166 83937311 -166750543 + MER5A DNA MER1_type 26 189 0 608 358 94 10 chr2 83938067 83938469 -166749385 - L2 LINE L2 -10 3262 2827 299 297 103 13 chr2 83938573 83938728 -166749126 - MIR SINE MIR -19 243 75 190 385 46 15 chr2 83939366 83939496 -166748358 - L2 LINE L2 -3 3269 3136 277 233 12 47 chr2 83939764 83939850 -166748004 + MIR3 SINE MIR 126 208 0 277 254 58 50 chr2 83941971 83942231 -166745623 - L1MC5 LINE L1 -186 7775 7514 243 0 0 0 chr2 83943210 83943237 -166744617 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 24 32 0 0 chr2 83943839 83943870 -166743984 + GC_rich Low_complexity Low_complexity 1 31 0 299 297 164 16 chr2 83944503 83944631 -166743223 - MER5B DNA MER1_type -42 147 1 248 240 40 0 chr2 83944758 83944808 -166743046 - L2 LINE L2 -16 3256 3205 210 224 0 0 chr2 83944930 83944979 -166742875 + CT-rich Low_complexity Low_complexity 6 54 0 668 326 109 21 chr2 83945920 83946420 -166741434 + L2 LINE L2 2741 3313 0 487 305 9 94 chr2 83947055 83947268 -166740586 - MIR3 SINE MIR -3 205 11 505 143 112 0 chr2 83949993 83950091 -166737763 - Tigger3(Golem) DNA MER2_type 0 3029 2921 349 250 0 48 chr2 83950222 83950306 -166737548 - Tigger3(Golem) DNA MER2_type -2949 80 1 265 357 10 0 chr2 83951452 83951550 -166736304 - MIR SINE MIR -13 249 151 188 336 121 9 chr2 83951543 83951659 -166736195 - L2 LINE L2 -4 3309 3181 * 23 0 0 0 chr2 83951800 83951823 -166736031 + AT_rich Low_complexity Low_complexity 1 23 0 1365 212 38 16 chr2 83954126 83954442 -166733412 + MER58B DNA MER1_type 19 341 0 1734 137 41 0 chr2 83954932 83955203 -166732651 - AluSx SINE Alu -30 282 1 215 343 131 51 chr2 83955254 83955723 -166732131 + L2 LINE L2 2381 2902 -412 654 185 7 15 chr2 83955723 83955858 -166731996 + MER94 DNA DNA 1 134 0 215 343 131 51 chr2 83955858 83955939 -166731915 + L2 LINE L2 2902 2975 -339 370 253 53 0 chr2 83956072 83956167 -166731687 + MER81 DNA DNA 1 100 -14 352 358 0 0 chr2 83956181 83956290 -166731564 + L2 LINE L2 3164 3272 0 386 295 41 8 chr2 83957139 83957261 -166730593 - MIR SINE MIR -63 145 20 237 254 95 41 chr2 83957275 83957344 -166730510 - L1MC4 LINE L1 -1 8041 7977 1264 205 137 3 chr2 83957344 83957666 -166730188 - MLT1A1 LTR MaLR 0 365 1 237 254 95 41 chr2 83957666 83957765 -166730089 - L1MC4 LINE L1 -65 7977 7864 2265 100 0 7 chr2 83958342 83958652 -166729202 + AluSc SINE Alu 1 308 -1 2109 134 3 0 chr2 83959258 83959556 -166728298 - AluSx SINE Alu -13 299 1 219 69 0 0 chr2 83959556 83959585 -166728269 + (T)n Simple_repeat Simple_repeat 1 29 0 186 133 0 0 chr2 83960442 83960472 -166727382 + (TG)n Simple_repeat Simple_repeat 2 31 0 2358 244 57 32 chr2 83962018 83962701 -166725153 - MER21B LTR ERV1 -145 718 19 4006 180 29 13 chr2 83962716 83963551 -166724303 + L1MB8 LINE L1 5331 6178 0 1684 200 72 25 chr2 83964040 83964486 -166723368 - MLT1C LTR MaLR 0 467 1 3333 264 100 29 chr2 83965109 83965778 -166722076 + L2 LINE L2 1644 2264 -1049 1679 167 0 4 chr2 83965778 83966053 -166721801 - AluJb SINE Alu -38 274 1 3333 264 100 29 chr2 83966053 83966950 -166720904 + L2 LINE L2 2264 3311 -2 2304 141 67 12 chr2 83967437 83967841 -166720013 - MSTB LTR MaLR 0 426 1 336 222 25 12 chr2 83968961 83969042 -166718812 + MER5A DNA MER1_type 9 90 -99 196 324 27 14 chr2 83968986 83969060 -166718794 - MER5A DNA MER1_type -23 166 92 * 195 42 0 0 chr2 83969096 83969120 -166718734 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 510 244 17 50 chr2 83969144 83969324 -166718530 - MER5B DNA MER1_type -3 175 2 289 295 74 95 chr2 83969655 83969845 -166718009 - MIR SINE MIR -71 191 6 580 212 9 0 chr2 83970973 83971086 -166716768 - FLAM_C SINE Alu -29 114 1 281 308 39 8 chr2 83971438 83971568 -166716286 - MER20B DNA MER1_type -607 176 43 184 273 73 0 chr2 83971911 83971966 -166715888 + MIR SINE MIR 159 217 -45 186 225 70 56 chr2 83971978 83972049 -166715805 + L2 LINE L2 2517 2588 -726 184 250 0 0 chr2 83973110 83973146 -166714708 - MIR SINE MIR -9 253 218 184 279 25 51 chr2 83975928 83976007 -166711847 + L3 LINE CR1 1325 1401 -176 183 319 21 11 chr2 83976121 83976215 -166711639 + L3 LINE CR1 1466 1560 -17 554 299 93 43 chr2 83976398 83976883 -166710971 + MLT1J LTR MaLR 1 509 -2 209 192 343 0 chr2 83977663 83977736 -166710118 + MIR3 SINE MIR 96 193 -15 298 294 24 0 chr2 83977745 83977830 -166710024 - L2 LINE L2 -2 3270 3184 309 117 0 0 chr2 83978497 83978557 -166709297 + (T)n Simple_repeat Simple_repeat 1 60 0 200 298 71 12 chr2 83978692 83978776 -166709078 + L2 LINE L2 3156 3244 -28 180 266 63 25 chr2 83978924 83979003 -166708851 + L2 LINE L2 2702 2783 -531 207 245 19 0 chr2 83979273 83979326 -166708528 + L2 LINE L2 3194 3247 -66 * 558 296 6 22 chr2 83979315 83979494 -166708360 + MIR SINE MIR 71 246 -16 2342 107 0 7 chr2 83979611 83979920 -166707934 - AluSq SINE Alu -6 307 1 1001 240 65 3 chr2 83979937 83980291 -166707563 - Charlie2 DNA MER1_type -17 2845 2470 784 161 0 8 chr2 83980360 83980503 -166707351 + FLAM_C SINE Alu 2 143 0 1129 277 33 25 chr2 83980516 83980637 -166707217 - L1M4 LINE L1 -1256 4890 4771 2423 122 70 8 chr2 83980637 83981038 -166706816 + MSTA LTR MaLR 1 426 -2 1129 277 33 25 chr2 83981038 83981404 -166706450 - L1M4 LINE L1 -1375 4771 4399 229 240 116 8 chr2 83981424 83981545 -166706309 - Charlie2 DNA MER1_type -411 2451 2318 588 306 50 20 chr2 83981650 83981951 -166705903 - Charlie2 DNA MER1_type -2551 311 2 25 51 0 0 chr2 83982171 83982210 -166705644 + AT_rich Low_complexity Low_complexity 1 39 0 327 270 112 47 chr2 83982926 83983001 -166704853 + MIR SINE MIR 14 83 -132 3680 160 33 9 chr2 83983001 83983694 -166704160 - MER67C LTR ERV1 0 710 1 327 270 112 47 chr2 83983694 83983759 -166704095 + MIR SINE MIR 83 154 -61 978 155 11 50 chr2 83984106 83984287 -166703567 + FAM SINE Alu 2 175 0 180 0 0 0 chr2 83985823 83985843 -166702011 + (T)n Simple_repeat Simple_repeat 1 20 0 1734 125 3 67 chr2 83987992 83988361 -166699493 - MER4A LTR ERV1 0 664 261 499 140 54 0 chr2 83988361 83988454 -166699400 - MER4A LTR ERV1 -566 98 1 207 357 69 9 chr2 83988549 83988662 -166699192 + MIR SINE MIR 17 146 -62 229 25 100 0 chr2 83988774 83988814 -166699040 + T-rich Low_complexity Low_complexity 2 45 0 203 253 22 44 chr2 83989480 83989571 -166698283 + MIR SINE MIR 124 212 -50 245 29 0 29 chr2 83990043 83990078 -166697776 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 302 186 29 0 chr2 83990081 83990151 -166697703 + (TATATG)n Simple_repeat Simple_repeat 2 73 0 358 313 8 0 chr2 83990625 83990756 -166697098 + L1ME LINE L1 5604 5735 -386 391 188 0 0 chr2 83990757 83990826 -166697028 + MLT1D LTR MaLR 1 69 -436 * 1853 198 64 28 chr2 83990825 83991294 -166696560 + MLT1D LTR MaLR 17 502 -3 258 81 0 0 chr2 83991520 83991557 -166696297 + (TG)n Simple_repeat Simple_repeat 1 37 0 278 357 0 0 chr2 83991838 83991922 -166695932 - MIR3 SINE MIR -30 178 95 955 238 67 50 chr2 83992027 83992507 -166695347 - MER39 LTR ERV1 -11 684 1 354 271 0 0 chr2 83993393 83993478 -166694376 + MER94 DNA DNA 1 85 -49 198 316 215 6 chr2 83993861 83994019 -166693835 + MIR SINE MIR 28 218 -44 984 210 19 28 chr2 83994198 83994412 -166693442 + MER20 DNA MER1_type 1 212 -7 209 119 24 0 chr2 83995011 83995053 -166692801 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1690 119 43 126 chr2 83995408 83995471 -166692383 - MLT1B LTR MaLR -4 386 319 2281 163 42 2 chr2 83995471 83995901 -166691953 - L1PA16 LINE L1 -9 6157 5711 1690 119 43 126 chr2 83995901 83996065 -166691789 - MLT1B LTR MaLR -71 319 207 357 82 0 0 chr2 83996065 83996114 -166691740 + (TG)n Simple_repeat Simple_repeat 2 50 0 1690 119 43 126 chr2 83996114 83996306 -166691548 - MLT1B LTR MaLR -183 207 1 2512 76 3 0 chr2 83996957 83997260 -166690594 - AluY SINE Alu -7 304 1 351 286 77 0 chr2 83998765 83998917 -166688937 - MIR SINE MIR -34 228 63 2067 80 14 14 chr2 83999471 83999807 -166688047 + AluSq SINE Alu 1 336 0 243 0 0 0 chr2 83999842 83999869 -166687985 + (CA)n Simple_repeat Simple_repeat 2 28 0 298 325 50 25 chr2 84000528 84000648 -166687206 + MIR SINE MIR 2 124 -138 267 314 12 12 chr2 84001154 84001246 -166686608 + MER5A DNA MER1_type 56 136 -42 2639 55 0 0 chr2 84001426 84001733 -166686121 - AluY SINE Alu -4 307 1 197 274 95 105 chr2 84003647 84003742 -166684112 - L2 LINE L2 -19 3253 3160 2779 139 13 4 chr2 84005168 84005643 -166682211 + L1PA15 LINE L1 5594 6072 -93 435 149 37 28 chr2 84005727 84005834 -166682020 + L1PA15 LINE L1 6057 6164 -1 223 341 61 0 chr2 84006430 84006512 -166681342 - L2 LINE L2 0 3272 3186 720 122 41 8 chr2 84006542 84006665 -166681189 + MLT1A1 LTR MaLR 10 136 -229 * 1525 159 20 17 chr2 84006653 84006949 -166680905 + MLT1A1 LTR MaLR 64 360 -5 322 259 22 36 chr2 84007008 84007147 -166680707 + CT-rich Low_complexity Low_complexity 3 139 0 2136 70 0 4 chr2 84008443 84008700 -166679154 + AluY SINE Alu 40 295 -16 24 0 0 0 chr2 84008715 84008739 -166679115 + AT_rich Low_complexity Low_complexity 1 24 0 349 271 108 31 chr2 84009570 84009699 -166678155 + MIR3 SINE MIR 15 153 -55 258 260 151 0 chr2 84009961 84010034 -166677820 - MIR SINE MIR -59 149 66 199 313 61 69 chr2 84010696 84010827 -166677027 - MIR3 SINE MIR -65 143 14 319 176 22 0 chr2 84010840 84010931 -166676923 + CT-rich Low_complexity Low_complexity 1 93 0 404 146 56 11 chr2 84011979 84012068 -166675786 + MER53 DNA DNA 1 93 -96 650 96 0 122 chr2 84012162 84012247 -166675607 - MER96B DNA MER1_type? -238 179 120 2197 120 7 7 chr2 84012247 84012547 -166675307 + AluSg SINE Alu 1 300 -10 650 96 0 122 chr2 84012547 84012617 -166675237 - MER96B DNA MER1_type? -297 120 43 301 267 175 17 chr2 84016050 84016170 -166671684 + MIR3 SINE MIR 22 160 -48 542 300 74 16 chr2 84018657 84018806 -166669048 - MIR SINE MIR -4 258 88 2522 119 8 0 chr2 84018806 84019167 -166668687 + THE1B LTR MaLR 1 364 0 542 300 74 16 chr2 84019167 84019260 -166668594 - MIR SINE MIR -174 88 2 2025 138 0 39 chr2 84019986 84020297 -166667557 + AluSx SINE Alu 1 299 -13 1219 145 0 16 chr2 84020399 84020585 -166667269 - AluSg/x SINE Alu -64 248 66 273 263 36 73 chr2 84022350 84022487 -166665367 + L2 LINE L2 2905 3036 -236 211 333 40 24 chr2 84022902 84023028 -166664826 - MER5A DNA MER1_type -28 161 34 192 360 0 0 chr2 84022975 84023050 -166664804 + MER5A DNA MER1_type 115 189 0 * 2977 214 55 9 chr2 84023337 84023997 -166663857 - MER21B LTR ERV1 -124 739 50 198 137 63 0 chr2 84024173 84024268 -166663586 + (TA)n Simple_repeat Simple_repeat 2 102 0 1280 163 17 42 chr2 84024378 84024667 -166663187 - MER96B DNA MER1_type? 0 417 136 2602 127 333 8 chr2 84025152 84025804 -166662050 - L1P LINE L1 -2102 4044 3181 219 349 218 15 chr2 84026105 84026366 -166661488 - L3 LINE CR1 -7 1570 1257 1827 106 80 4 chr2 84027514 84027789 -166660065 + AluSg SINE Alu 1 296 -14 2587 48 0 3 chr2 84027983 84028292 -166659562 + AluY SINE Alu 1 308 -3 511 246 0 22 chr2 84028906 84029044 -166658810 + MER58B DNA MER1_type 207 341 0 253 303 81 0 chr2 84030955 84031054 -166656800 + L2 LINE L2 3166 3272 0 695 289 78 0 chr2 84033108 84033340 -166654514 + MIR SINE MIR 12 261 -1 534 286 75 0 chr2 84035602 84035749 -166652105 + MER117 DNA MER1_type 40 197 0 245 278 0 0 chr2 84035914 84035968 -166651886 + LTR67 LTR ERVL 30 83 -474 303 143 0 0 chr2 84036205 84036254 -166651600 + LTR67 LTR ERVL 495 543 -14 439 277 155 0 chr2 84036282 84036430 -166651424 - MER5A DNA MER1_type -6 183 13 446 232 85 55 chr2 84036690 84036973 -166650881 - L1MC5 LINE L1 -1064 6978 6684 3472 136 61 68 chr2 84036999 84037821 -166650033 + L1MA9 LINE L1 5493 6308 -4 22 56 0 0 chr2 84038020 84038056 -166649798 + AT_rich Low_complexity Low_complexity 1 36 0 24 53 0 0 chr2 84038173 84038211 -166649643 + AT_rich Low_complexity Low_complexity 1 38 0 330 331 64 31 chr2 84038219 84038578 -166649276 - HAL1b LINE L1 -748 600 230 571 189 118 0 chr2 84038582 84038751 -166649103 - L1MA7 LINE L1 0 6291 6103 223 277 11 43 chr2 84038964 84039148 -166648706 + T-rich Low_complexity Low_complexity 3 180 0 471 326 24 11 chr2 84039605 84039804 -166648050 + MIR SINE MIR 45 247 -15 252 0 0 0 chr2 84041474 84041502 -166646352 + (A)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr2 84041896 84041916 -166645938 + (CCA)n Simple_repeat Simple_repeat 3 22 0 262 258 0 15 chr2 84042532 84042598 -166645256 + GA-rich Low_complexity Low_complexity 2 66 0 746 237 78 48 chr2 84043367 84043486 -166644368 - L1M4 LINE L1 -1828 4318 4204 2173 140 25 14 chr2 84043486 84043844 -166644010 - THE1B LTR MaLR 0 364 3 746 237 78 48 chr2 84043844 84044162 -166643692 - L1M4 LINE L1 -1942 4204 3868 722 270 138 19 chr2 84044193 84044775 -166643079 - L1M4 LINE L1 -2503 3643 2993 750 262 53 45 chr2 84045060 84045399 -166642455 - LTR52 LTR ERVL -40 381 37 2314 85 0 0 chr2 84045399 84045693 -166642161 - AluSg SINE Alu -16 294 1 750 262 53 45 chr2 84045693 84045731 -166642123 - LTR52 LTR ERVL -384 37 1 468 222 0 0 chr2 84045732 84045831 -166642023 - LTR52-int LTR ERVL -1 3555 3457 180 0 0 0 chr2 84047372 84047392 -166640462 + (TTG)n Simple_repeat Simple_repeat 2 21 0 625 379 51 29 chr2 84047880 84048559 -166639295 + L2 LINE L2 2553 3252 -20 1016 318 145 4 chr2 84049241 84049978 -166637876 - L2 LINE L2 -7 3306 2453 439 152 0 0 chr2 84050216 84050295 -166637559 + AluJ/FRAM SINE Alu 232 310 -2 690 323 0 5 chr2 84050708 84050909 -166636945 - MIR SINE MIR -61 201 2 391 298 147 60 chr2 84051719 84051937 -166635917 - MIR SINE MIR -6 256 20 205 161 0 0 chr2 84052274 84052305 -166635549 + (TATG)n Simple_repeat Simple_repeat 4 34 0 206 274 204 9 chr2 84052787 84052900 -166634954 + MIR3 SINE MIR 67 201 -7 25 31 0 0 chr2 84053445 84053477 -166634377 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 84054062 84054091 -166633763 + AT_rich Low_complexity Low_complexity 1 29 0 1314 158 118 24 chr2 84055756 84056010 -166631844 - AluJb SINE Alu -7 305 28 1221 157 69 0 chr2 84056253 84056457 -166631397 - MER20 DNA MER1_type 0 219 2 224 250 118 0 chr2 84057543 84057611 -166630243 + MER5A DNA MER1_type 6 81 -108 1728 159 50 31 chr2 84057801 84057829 -166630025 + MLT1A1 LTR MaLR 1 27 -338 1837 213 8 0 chr2 84057829 84058191 -166629663 - MLT1A1 LTR MaLR 0 365 1 1728 159 50 31 chr2 84058191 84058520 -166629334 + MLT1A1 LTR MaLR 27 365 0 1496 177 58 78 chr2 84058943 84058985 -166628869 - MLT1B LTR MaLR -1 389 348 1991 110 3 38 chr2 84058985 84059301 -166628553 + AluSq SINE Alu 1 306 0 1496 177 58 78 chr2 84059301 84059653 -166628201 - MLT1B LTR MaLR -42 348 2 216 0 0 0 chr2 84059693 84059717 -166628137 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2142 118 0 29 chr2 84060655 84060969 -166626885 - AluSx SINE Alu -7 305 1 183 279 125 58 chr2 84061063 84061167 -166626687 - MIR SINE MIR -72 136 26 * 722 274 62 51 chr2 84061143 84061435 -166626419 - L2 LINE L2 -19 3294 3000 644 276 70 48 chr2 84062090 84062463 -166625391 - MLT1I LTR MaLR -9 400 20 267 303 118 0 chr2 84064642 84064761 -166623093 - L2 LINE L2 -2 3311 3179 214 250 18 18 chr2 84064773 84064829 -166623025 + MIR3 SINE MIR 10 65 -143 410 285 67 31 chr2 84064839 84065032 -166622822 + MIR SINE MIR 3 202 -60 180 365 75 0 chr2 84065250 84065357 -166622497 - MIR SINE MIR -143 119 5 210 318 91 0 chr2 84065358 84065446 -166622408 + MIR3 SINE MIR 109 204 -4 424 185 12 0 chr2 84065726 84065807 -166622047 - MER20 DNA MER1_type -4 215 134 1227 229 39 33 chr2 84065811 84066174 -166621680 + MLT1A2 LTR MaLR 7 371 -3 615 154 65 0 chr2 84066174 84066293 -166621561 - MER20 DNA MER1_type -81 138 12 1835 176 3 6 chr2 84066398 84066747 -166621107 - AluJb SINE Alu 0 348 1 374 287 37 48 chr2 84066798 84066986 -166620868 - MER5A DNA MER1_type -3 186 1 561 277 59 25 chr2 84067143 84067345 -166620509 + MIR SINE MIR 47 255 -7 253 415 16 16 chr2 84067445 84067633 -166620221 - MER5A DNA MER1_type 0 189 2 740 227 49 0 chr2 84069730 84069893 -166617961 - MER5B DNA MER1_type -2 176 6 865 170 6 36 chr2 84070388 84070603 -166617251 + FRAM SINE Alu 1 201 0 230 253 33 11 chr2 84070620 84070711 -166617143 - L1ME4a LINE L1 -4 6117 6025 2553 117 22 0 chr2 84072418 84072785 -166615069 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 84072973 84072994 -166614860 + AT_rich Low_complexity Low_complexity 1 21 0 371 367 51 23 chr2 84073356 84073533 -166614321 - MIR SINE MIR -80 182 1 374 353 33 0 chr2 84073553 84073675 -166614179 - L2 LINE L2 0 3272 3147 239 281 0 0 chr2 84075282 84075339 -166612515 + A-rich Low_complexity Low_complexity 1 57 0 330 324 27 38 chr2 84076192 84076377 -166611477 - MIR3 SINE MIR -25 183 1 252 308 33 22 chr2 84077164 84077255 -166610599 - MIR SINE MIR -139 123 32 456 267 45 102 chr2 84077868 84078058 -166609796 + MIR SINE MIR 12 184 -78 1827 129 11 67 chr2 84078058 84078331 -166609523 + L1MA4 LINE L1 5950 6198 -102 1938 114 47 17 chr2 84078331 84078628 -166609226 - AluSx SINE Alu -6 306 1 1827 129 11 67 chr2 84078628 84078726 -166609128 + L1MA4 LINE L1 6198 6300 0 456 267 45 102 chr2 84078726 84078801 -166609053 + MIR SINE MIR 184 262 0 190 354 0 30 chr2 84079913 84080012 -166607842 - L3 LINE CR1 -3 1574 1479 1696 137 8 118 chr2 84080123 84080487 -166607367 + Tigger3(Golem) DNA MER2_type 2 3006 -23 350 230 40 20 chr2 84080489 84080589 -166607265 - MER5B DNA MER1_type -75 103 2 993 186 5 62 chr2 84082052 84082245 -166605609 - MER5A DNA MER1_type 0 189 8 2306 157 19 40 chr2 84082336 84082815 -166605039 + MER31A LTR ERV1 1 469 -16 421 267 23 46 chr2 84082948 84083305 -166604549 + MARNA DNA Mariner 179 560 -26 226 372 54 45 chr2 84083347 84083570 -166604284 - MIR SINE MIR -6 256 32 285 182 0 0 chr2 84083851 84083906 -166603948 + CT-rich Low_complexity Low_complexity 2 56 0 180 321 18 0 chr2 84085063 84085119 -166602735 - MIR SINE MIR -150 112 56 870 250 56 5 chr2 84085984 84086200 -166601654 - MIR SINE MIR -26 236 10 180 277 96 24 chr2 84086372 84086455 -166601399 - L3 LINE CR1 -1218 359 271 209 304 174 0 chr2 84088377 84088469 -166599385 - MIR SINE MIR -142 120 13 478 276 54 10 chr2 84088542 84088745 -166599109 + L1MD3 LINE L1 7770 7981 -14 1820 169 85 3 chr2 84088904 84089235 -166598619 + MLT1A1 LTR MaLR 8 365 0 378 333 68 4 chr2 84089235 84089471 -166598383 - MARNA DNA Mariner -50 536 286 2166 96 4 0 chr2 84089658 84089970 -166597884 - AluSg SINE Alu 0 313 1 180 209 23 23 chr2 84090047 84090090 -166597764 + L2 LINE L2 3210 3252 -20 213 325 65 0 chr2 84090157 84090234 -166597620 + MIR3 SINE MIR 111 192 -16 532 316 65 56 chr2 84091217 84091556 -166596298 + MER115 DNA AcHobo 1 342 -351 566 314 63 57 chr2 84091867 84092511 -166595343 - L2 LINE L2 0 3313 2588 2052 118 28 3 chr2 84094794 84095081 -166592773 + AluSx SINE Alu 1 294 -18 304 276 72 40 chr2 84096301 84096453 -166591401 + L1ME4a LINE L1 5954 6110 -11 194 152 0 22 chr2 84097680 84097726 -166590128 + G-rich Low_complexity Low_complexity 5 49 0 29 47 0 0 chr2 84097755 84097798 -166590056 + AT_rich Low_complexity Low_complexity 1 43 0 28 54 0 0 chr2 84100566 84100603 -166587251 + AT_rich Low_complexity Low_complexity 1 37 0 1315 176 50 18 chr2 84100829 84101108 -166586746 - AluSx SINE Alu -24 288 1 911 229 49 10 chr2 84102014 84102319 -166585535 - L1MC5 LINE L1 -36 7925 7609 213 156 0 22 chr2 84102342 84102387 -166585467 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 397 232 80 72 chr2 84102439 84102689 -166585165 - L1MC5 LINE L1 -530 7431 7180 257 337 12 0 chr2 84103234 84103317 -166584537 - L2 LINE L2 -1 3271 3188 202 317 236 16 chr2 84103716 84103839 -166584015 - MIR3 SINE MIR -56 152 3 296 226 48 0 chr2 84104856 84104940 -166582914 - L1PB1 LINE L1 -24 6127 6040 475 257 112 14 chr2 84105705 84105812 -166582042 + MIR SINE MIR 1 96 -166 558 88 0 0 chr2 84105812 84105892 -166581962 - MADE1 DNA Mariner 0 80 1 475 257 112 14 chr2 84105892 84105965 -166581889 + MIR SINE MIR 96 193 -69 267 359 26 8 chr2 84105965 84106082 -166581772 + MIR SINE MIR 3 121 -141 2303 112 0 0 chr2 84106084 84106387 -166581467 - AluSg SINE Alu -7 303 1 1153 67 0 0 chr2 84106387 84106522 -166581332 - AluSq/x SINE Alu -177 135 1 449 233 62 23 chr2 84106522 84106651 -166581203 + MIR SINE MIR 110 243 -19 839 185 19 6 chr2 84107221 84107378 -166580476 - MER5A DNA MER1_type -2 187 29 271 276 104 22 chr2 84107425 84107559 -166580295 + MER5B DNA MER1_type 34 178 0 596 304 18 0 chr2 84107728 84107896 -166579958 + MER5B DNA MER1_type 6 176 -2 189 83 0 0 chr2 84108048 84108072 -166579782 + MER5B DNA MER1_type 1 24 -154 2243 112 0 3 chr2 84108073 84108385 -166579469 - AluY SINE Alu 0 311 1 280 273 0 0 chr2 84108393 84108459 -166579395 - MER5A DNA MER1_type -120 69 4 228 100 0 0 chr2 84108566 84108606 -166579248 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 251 253 38 38 chr2 84108711 84108790 -166579064 - MARNA DNA Mariner -186 400 322 493 272 103 0 chr2 84109047 84109231 -166578623 - MER58C DNA MER1_type -2 213 11 813 185 46 6 chr2 84111830 84112003 -166575851 - MER58A DNA MER1_type -2 222 43 2784 176 40 2 chr2 84112126 84112654 -166575200 + MER44D DNA MER2_type 3 605 0 321 342 40 15 chr2 84113343 84113545 -166574309 + L1ME4a LINE L1 5691 5897 -224 245 244 227 6 chr2 84113637 84113809 -166574045 + L2 LINE L2 3102 3311 -2 287 317 78 28 chr2 84113942 84114084 -166573770 - MIR SINE MIR -104 158 10 6800 55 8 5 chr2 84115477 84116152 -166571702 - L1PA8 LINE L1 -13 6159 5488 2201 122 3 0 chr2 84116152 84116448 -166571406 - AluSp SINE Alu -16 297 1 6800 55 8 5 chr2 84116448 84117549 -166570305 - L1PA8 LINE L1 -684 5488 4388 752 174 0 0 chr2 84117582 84117703 -166570151 - AluSg/x SINE Alu -20 292 172 180 0 0 0 chr2 84117877 84117897 -166569957 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1359 128 72 4 chr2 84118873 84119138 -166568716 + AluSx SINE Alu 4 286 -26 1394 180 12 8 chr2 84120291 84120541 -166567313 + AluJo SINE Alu 1 251 -61 183 42 0 0 chr2 84121483 84121507 -166566347 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 300 310 20 0 chr2 84122339 84122439 -166565415 - MIR SINE MIR -73 189 88 2177 90 7 13 chr2 84122717 84123018 -166564836 - AluSp SINE Alu -14 299 1 12633 132 53 8 chr2 84125090 84127348 -166560506 - Tigger1 DNA MER2_type 0 2418 60 1790 187 27 0 chr2 84127579 84127916 -166559938 - MER7A DNA MER2_type -1 345 2 32 0 0 0 chr2 84127921 84127953 -166559901 + AT_rich Low_complexity Low_complexity 1 32 0 1887 144 0 24 chr2 84127961 84128282 -166559572 + AluSx SINE Alu 1 314 0 4649 155 32 17 chr2 84128434 84128706 -166559148 - L1PB3 LINE L1 -88 6066 5800 324 48 0 0 chr2 84128706 84128748 -166559106 + (TG)n Simple_repeat Simple_repeat 2 43 0 4649 155 32 17 chr2 84128748 84130103 -166557751 - L1PB3 LINE L1 -354 5800 4411 24 0 0 0 chr2 84130117 84130141 -166557713 + AT_rich Low_complexity Low_complexity 1 24 0 924 186 5 37 chr2 84130262 84130450 -166557404 + MER20 DNA MER1_type 37 218 -1 658 324 100 14 chr2 84130450 84130740 -166557114 + L3 LINE CR1 1177 1491 -86 25 0 0 0 chr2 84131125 84131150 -166556704 + AT_rich Low_complexity Low_complexity 1 25 0 36 40 0 0 chr2 84131271 84131321 -166556533 + AT_rich Low_complexity Low_complexity 1 50 0 589 198 93 37 chr2 84131343 84131505 -166556349 - MER5C DNA MER1_type -131 193 23 203 321 45 36 chr2 84131675 84131787 -166556067 + MIR SINE MIR 31 143 -65 581 234 38 19 chr2 84132307 84132465 -166555389 + MIR SINE MIR 102 262 0 324 0 0 0 chr2 84133058 84133094 -166554760 + (TTTAA)n Simple_repeat Simple_repeat 4 39 0 1058 220 23 0 chr2 84133375 84133593 -166554261 - MER58A DNA MER1_type 0 224 2 355 205 96 130 chr2 84133698 84133937 -166553917 + Charlie8 DNA MER1_type 72 1389 -1028 240 86 0 0 chr2 84134353 84134388 -166553466 + (TA)n Simple_repeat Simple_repeat 2 36 0 236 247 247 0 chr2 84134473 84134558 -166553296 - L2 LINE L2 -5 3267 3162 23 0 0 0 chr2 84135142 84135165 -166552689 + AT_rich Low_complexity Low_complexity 1 23 0 2249 85 0 0 chr2 84135709 84136021 -166551833 + AluY SINE Alu 1 312 0 29 0 0 0 chr2 84136622 84136651 -166551203 + AT_rich Low_complexity Low_complexity 1 29 0 204 365 40 40 chr2 84137146 84137272 -166550582 - L2 LINE L2 0 3313 3188 252 348 22 43 chr2 84137272 84137364 -166550490 + MIR SINE MIR 2 91 -171 367 269 103 31 chr2 84137436 84137659 -166550195 - L1ME4a LINE L1 -6 6115 5877 709 202 84 19 chr2 84137665 84137878 -166549976 - L1MD3 LINE L1 -13 7982 7756 2259 81 20 10 chr2 84137987 84138283 -166549571 + AluSg SINE Alu 1 299 -11 2555 119 14 0 chr2 84138316 84138686 -166549168 - THE1C LTR MaLR 0 375 1 271 268 0 0 chr2 84139869 84139925 -166547929 + (CA)n Simple_repeat Simple_repeat 1 56 0 1236 224 25 25 chr2 84141275 84141592 -166546262 - MER58B DNA MER1_type -22 319 3 591 237 21 38 chr2 84142767 84142953 -166544901 - MER58B DNA MER1_type -22 319 137 469 209 55 0 chr2 84144140 84144250 -166543604 - MER94 DNA DNA -18 116 1 2242 125 123 5 chr2 84144508 84144891 -166542963 + MSTA LTR MaLR 1 428 0 319 343 108 55 chr2 84144950 84145532 -166542322 + L2 LINE L2 2661 3272 0 348 275 78 48 chr2 84147001 84147168 -166540686 + L3 LINE CR1 1194 1365 -212 536 189 61 14 chr2 84147195 84147343 -166540511 - LTR37A LTR ERV1 0 426 272 254 438 0 0 chr2 84147512 84147649 -166540205 + L3 LINE CR1 1441 1577 0 1942 186 23 39 chr2 84147978 84148126 -166539728 + MLT1C LTR MaLR 36 185 -282 2396 90 0 6 chr2 84148126 84148438 -166539416 + AluSx SINE Alu 1 310 -2 1942 186 23 39 chr2 84148438 84148725 -166539129 + MLT1C LTR MaLR 185 464 -3 21 0 0 0 chr2 84148866 84148887 -166538967 + AT_rich Low_complexity Low_complexity 1 21 0 263 216 91 68 chr2 84148920 84149008 -166538846 + MIR SINE MIR 2 92 -116 1291 235 73 16 chr2 84150014 84150543 -166537311 + MLT1E LTR MaLR 3 593 0 262 205 12 115 chr2 84151981 84152013 -166535841 + L1MC5 LINE L1 7800 7834 -208 2021 143 7 0 chr2 84152013 84152307 -166535547 + AluSx SINE Alu 1 296 -16 262 205 12 115 chr2 84152307 84152415 -166535439 + L1MC5 LINE L1 7834 8042 0 463 208 17 0 chr2 84152795 84152915 -166534939 + (TCCA)n Simple_repeat Simple_repeat 4 125 0 233 274 0 0 chr2 84152917 84152968 -166534886 - L2 LINE L2 0 3272 3222 507 265 53 21 chr2 84154079 84154268 -166533586 - LTR16A1 LTR ERVL -9 448 254 201 285 39 27 chr2 84154485 84154565 -166533289 + MIR3 SINE MIR 2 81 -135 1586 182 9 38 chr2 84155357 84155676 -166532178 + AluJb SINE Alu 1 310 -2 403 330 0 0 chr2 84155719 84155837 -166532017 - MIR3 SINE MIR -9 199 82 1144 239 77 57 chr2 84156461 84157042 -166530812 - MLT1E3 LTR MaLR -14 628 1 402 312 84 19 chr2 84157057 84157272 -166530582 + MIR SINE MIR 21 249 -13 231 114 0 0 chr2 84157602 84157637 -166530217 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 374 280 32 109 chr2 84158698 84159210 -166528644 - L2 LINE L2 -208 3064 2596 316 293 130 8 chr2 84159382 84159505 -166528349 + MIR SINE MIR 125 262 0 636 250 60 0 chr2 84159542 84159710 -166528144 + MIR SINE MIR 37 214 -48 324 228 125 44 chr2 84160464 84160600 -166527254 + MIR3 SINE MIR 45 191 -17 1658 155 10 59 chr2 84160658 84160961 -166526893 + AluSx SINE Alu 1 288 -24 314 243 9 84 chr2 84161631 84161738 -166526116 - MIR SINE MIR -69 193 95 226 260 13 65 chr2 84162262 84162339 -166525515 - MIR SINE MIR -120 88 16 191 356 58 11 chr2 84162496 84162583 -166525271 + L2 LINE L2 3203 3293 -20 2380 94 7 0 chr2 84164342 84164649 -166523205 + AluSq SINE Alu 1 309 -4 21 36 0 0 chr2 84165134 84165162 -166522692 + AT_rich Low_complexity Low_complexity 1 28 0 774 195 55 30 chr2 84165209 84165409 -166522445 - MER106A DNA MER1_type 0 236 32 318 150 0 33 chr2 84166032 84166092 -166521762 - MLT1I LTR MaLR -2 407 350 240 235 49 59 chr2 84166162 84166264 -166521590 - MLT1J2 LTR MaLR -293 157 57 2382 203 217 66 chr2 84166606 84167490 -166520364 - LTR28 LTR ERV1 0 1020 3 189 309 24 12 chr2 84168030 84168114 -166519740 + L3b LINE CR1 1415 1499 -84 21 0 0 0 chr2 84171506 84171527 -166516327 + AT_rich Low_complexity Low_complexity 1 21 0 240 111 0 0 chr2 84171836 84171872 -166515982 + (TG)n Simple_repeat Simple_repeat 1 36 0 1402 208 21 15 chr2 84173140 84173472 -166514382 - MLT1A1 LTR MaLR -7 358 25 1874 185 56 48 chr2 84174104 84174585 -166513269 + MLT1D LTR MaLR 21 505 0 955 156 155 37 chr2 84175267 84175608 -166512246 + MSTA LTR MaLR 10 428 0 315 316 103 0 chr2 84176842 84176997 -166510857 + MIR SINE MIR 5 175 -87 26 64 0 0 chr2 84177580 84177627 -166510227 + AT_rich Low_complexity Low_complexity 1 47 0 1069 196 147 58 chr2 84178740 84179067 -166508787 - MLT1A1 LTR MaLR 0 365 10 868 210 55 11 chr2 84179674 84179855 -166507999 + MER5A DNA MER1_type 1 189 0 336 143 0 0 chr2 84182765 84182821 -166505033 + (TG)n Simple_repeat Simple_repeat 2 57 0 21 0 0 0 chr2 84183175 84183196 -166504658 + AT_rich Low_complexity Low_complexity 1 21 0 666 211 5 89 chr2 84183232 84183422 -166504432 - MER20 DNA MER1_type -8 211 38 204 40 0 0 chr2 84184376 84184401 -166503453 + (A)n Simple_repeat Simple_repeat 1 25 0 258 319 106 18 chr2 84184665 84184778 -166503076 + MIR SINE MIR 16 138 -70 281 255 41 51 chr2 84185821 84185919 -166501935 - LTR40a LTR ERVL -162 357 261 2090 102 7 50 chr2 84185995 84186298 -166501556 - AluSq SINE Alu -23 290 1 1172 257 128 11 chr2 84186637 84187162 -166500692 + L1MC4a LINE L1 5334 5919 -1889 647 207 7 28 chr2 84187855 84188000 -166499854 - AluJo SINE Alu -170 142 1 230 292 46 100 chr2 84190036 84190166 -166497688 + L2 LINE L2 3146 3268 -4 201 306 102 9 chr2 84190148 84190256 -166497598 - MIR SINE MIR -49 213 96 * 228 159 0 0 chr2 84190447 84190491 -166497363 - MLT1F1 LTR MaLR -3 564 521 * 779 236 76 30 chr2 84190490 84190753 -166497101 - MLT1E LTR MaLR -318 275 1 312 27 0 0 chr2 84192883 84192920 -166494934 + (TG)n Simple_repeat Simple_repeat 1 37 0 194 405 16 16 chr2 84192963 84193089 -166494765 - L2 LINE L2 -201 3071 2946 2542 71 0 0 chr2 84193956 84194264 -166493590 - AluY SINE Alu -3 308 1 2135 120 0 0 chr2 84194379 84194671 -166493183 - AluSx SINE Alu -20 292 1 268 56 0 0 chr2 84195345 84195381 -166492473 + MADE1 DNA Mariner 45 80 0 464 305 88 29 chr2 84196385 84196701 -166491153 - L1ME LINE L1 -563 5599 5256 218 264 224 46 chr2 84198003 84198177 -166489677 - MIR SINE MIR -10 252 48 21 0 0 0 chr2 84199209 84199230 -166488624 + AT_rich Low_complexity Low_complexity 1 21 0 364 173 102 8 chr2 84199555 84199682 -166488172 - Charlie5 DNA MER1_type 0 2620 2482 222 37 0 0 chr2 84200098 84200125 -166487729 + (CA)n Simple_repeat Simple_repeat 2 28 0 943 195 15 5 chr2 84200831 84201026 -166486828 + MER82 DNA MER2_type 11 207 -446 1278 101 0 87 chr2 84201027 84201234 -166486620 + AluSx SINE Alu 38 226 -86 239 277 287 0 chr2 84201241 84201342 -166486512 + MER119 DNA MER1_type 2 131 -452 657 304 104 22 chr2 84201428 84201981 -166485873 - L2 LINE L2 -2 3311 2589 221 273 91 18 chr2 84202350 84202460 -166485394 + MIR3 SINE MIR 8 125 -83 484 258 161 18 chr2 84203001 84203218 -166484636 + MIR SINE MIR 15 262 0 341 319 59 0 chr2 84203367 84203486 -166484368 - MIR SINE MIR -109 153 28 549 230 34 56 chr2 84204413 84204591 -166483263 + MIR SINE MIR 89 262 0 282 333 28 62 chr2 84204768 84204912 -166482942 + MIR SINE MIR 12 150 -112 1863 170 0 3 chr2 84205057 84205351 -166482503 + AluSx SINE Alu 1 293 -19 566 297 174 14 chr2 84205362 84205581 -166482273 - MIR SINE MIR 0 262 9 29 28 0 0 chr2 84205814 84205850 -166482004 + AT_rich Low_complexity Low_complexity 1 36 0 399 299 62 0 chr2 84207435 84207579 -166480275 + MIR SINE MIR 96 248 -14 307 265 227 15 chr2 84208949 84209081 -166478773 + MIR SINE MIR 32 191 -71 311 344 151 0 chr2 84211396 84211588 -166476266 + MIR SINE MIR 9 229 -33 180 308 107 50 chr2 84211781 84211940 -166475914 - MIR SINE MIR -59 203 36 3506 189 20 0 chr2 84212260 84212895 -166474959 + MER82 DNA MER2_type 2 649 -4 414 0 0 0 chr2 84214185 84214231 -166473623 + (TG)n Simple_repeat Simple_repeat 1 46 0 189 0 0 0 chr2 84215782 84215803 -166472051 + (T)n Simple_repeat Simple_repeat 1 21 0 210 37 0 0 chr2 84217664 84217691 -166470163 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 356 125 0 0 chr2 84217763 84217811 -166470043 - MER3 DNA MER1_type -1 208 161 4704 186 55 36 chr2 84217812 84219936 -166467918 - L1MB3 LINE L1 -1 6182 4015 7427 111 3 28 chr2 84220003 84220622 -166467232 - L1P LINE L1 -1308 4838 4260 2545 57 0 10 chr2 84220622 84220936 -166466918 - AluY SINE Alu 0 311 1 7427 111 3 28 chr2 84220936 84221483 -166466371 - L1P LINE L1 -1886 4260 3701 6199 82 36 2 chr2 84221483 84221671 -166466183 + L1PA8 LINE L1 4841 5021 -1151 180 0 0 0 chr2 84221671 84221691 -166466163 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 6199 82 36 2 chr2 84221691 84222798 -166465056 + L1PA8 LINE L1 5021 6170 -2 1608 229 40 94 chr2 84222801 84223481 -166464373 + L1MD1 LINE L1 5589 6231 -11 663 163 44 15 chr2 84223494 84223629 -166464225 - MER3 DNA MER1_type -59 150 12 1151 58 32 6 chr2 84224106 84224262 -166463592 - L1PA3 LINE L1 -4 6151 5992 22 0 0 0 chr2 84224407 84224429 -166463425 + AT_rich Low_complexity Low_complexity 1 22 0 576 275 84 26 chr2 84224433 84224898 -166462956 + L1M4 LINE L1 4887 5378 -768 346 89 71 0 chr2 84225052 84225108 -166462746 - AluJo/F(R)AM SINE Alu -91 220 161 469 128 39 0 chr2 84225109 84225187 -166462667 - AluJ/FLAM SINE Alu -221 91 11 447 173 0 25 chr2 84225341 84225422 -166462432 + MER63 DNA MER1_type 675 753 -83 241 284 60 0 chr2 84225424 84225491 -166462363 + MER63 DNA MER1_type 984 1054 -7 612 313 97 62 chr2 84225627 84226243 -166461611 - L1MB3 LINE L1 -2531 3615 2978 292 356 85 28 chr2 84226266 84226443 -166461411 + MIR3 SINE MIR 19 205 -3 21 57 0 0 chr2 84227613 84227648 -166460206 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 84227852 84227881 -166459973 + AT_rich Low_complexity Low_complexity 1 29 0 367 330 131 5 chr2 84227911 84228102 -166459752 + MIR SINE MIR 24 238 -24 25 0 0 0 chr2 84228938 84228963 -166458891 + AT_rich Low_complexity Low_complexity 1 25 0 414 0 0 0 chr2 84230692 84230738 -166457116 + (CA)n Simple_repeat Simple_repeat 2 47 0 259 224 0 71 chr2 84235600 84235702 -166452152 + GA-rich Low_complexity Low_complexity 1 94 0 1303 186 90 25 chr2 84238540 84238863 -166448991 - MER2 DNA MER2_type 0 344 1 25 0 0 0 chr2 84238992 84239017 -166448837 + AT_rich Low_complexity Low_complexity 1 25 0 184 250 0 50 chr2 84239691 84239751 -166448103 - L2 LINE L2 0 3272 3216 211 259 19 0 chr2 84243346 84243400 -166444454 + CT-rich Low_complexity Low_complexity 1 55 0 493 301 15 36 chr2 84245382 84245578 -166442276 + MIR3 SINE MIR 15 206 -2 201 263 19 144 chr2 84247969 84248129 -166439725 + MER5A DNA MER1_type 50 189 0 389 348 27 5 chr2 84249614 84249798 -166438056 - MIR SINE MIR -7 255 68 27 29 0 0 chr2 84250415 84250449 -166437405 + AT_rich Low_complexity Low_complexity 1 34 0 329 308 88 61 chr2 84250537 84250865 -166436989 - MLT1J LTR MaLR -75 436 100 6885 57 25 2 chr2 84251040 84252193 -166435661 - L1PA7 LINE L1 -1 6153 4994 4740 84 55 7 chr2 84252193 84252897 -166434957 + L1PA7 LINE L1 4246 4983 -1163 612 316 26 0 chr2 84253245 84253435 -166434419 + MIR SINE MIR 56 250 -12 271 203 0 58 chr2 84253535 84253604 -166434250 - L2 LINE L2 -56 3257 3193 339 322 96 28 chr2 84253689 84253866 -166433988 - MER5A DNA MER1_type 0 189 1 750 239 0 58 chr2 84253999 84254187 -166433667 - MER20 DNA MER1_type -39 180 4 2192 104 0 0 chr2 84254695 84254983 -166432871 + AluSc SINE Alu 15 302 -7 23 0 0 0 chr2 84255683 84255706 -166432148 + AT_rich Low_complexity Low_complexity 1 23 0 267 192 151 82 chr2 84256101 84256247 -166431607 + MIR SINE MIR 49 204 -58 407 307 30 30 chr2 84257169 84257347 -166430507 - MIR SINE MIR -57 151 23 261 308 110 34 chr2 84257997 84258143 -166429711 + MIR SINE MIR 104 260 -2 1163 308 77 28 chr2 84258439 84259269 -166428585 - L2 LINE L2 -10 3303 2356 524 307 26 11 chr2 84260041 84260230 -166427624 + MER117 DNA MER1_type 6 197 0 21 36 0 0 chr2 84260296 84260324 -166427530 + AT_rich Low_complexity Low_complexity 1 28 0 474 318 99 22 chr2 84261527 84261750 -166426104 - MIR SINE MIR 0 262 23 2141 119 0 0 chr2 84263539 84263834 -166424020 - AluSx SINE Alu -17 295 1 264 30 0 0 chr2 84263838 84263871 -166423983 + (TG)n Simple_repeat Simple_repeat 2 34 0 2338 86 7 3 chr2 84264145 84264448 -166423406 + AluSg SINE Alu 1 304 -6 280 342 87 20 chr2 84266672 84266821 -166421033 + L2 LINE L2 3100 3258 -14 368 273 33 41 chr2 84267564 84267685 -166420169 + MIR SINE MIR 6 125 -137 578 283 80 17 chr2 84268423 84268660 -166419194 + MIR SINE MIR 10 261 -1 735 174 90 39 chr2 84269822 84270000 -166417854 - MER5A DNA MER1_type 0 189 3 472 309 40 7 chr2 84271162 84271314 -166416540 + MIR SINE MIR 90 246 -16 182 118 29 0 chr2 84272220 84272254 -166415600 + T-rich Low_complexity Low_complexity 2 36 0 21 0 0 0 chr2 84273379 84273400 -166414454 + AT_rich Low_complexity Low_complexity 1 21 0 302 288 34 8 chr2 84276084 84276202 -166411652 + L1M4c LINE L1 413 533 -5770 2189 164 26 10 chr2 84276348 84276737 -166411117 - MER61B LTR ERV1 -30 395 1 272 282 36 18 chr2 84277108 84277218 -166410636 + L1M4c LINE L1 1086 1197 -5116 * 2567 262 34 21 chr2 84277217 84277457 -166410397 + L1M4c LINE L1 2450 2686 -3696 1765 144 50 42 chr2 84277457 84277838 -166410016 + L1MA5A LINE L1 5912 6295 -2 2567 262 34 21 chr2 84277838 84278494 -166409360 + L1M4c LINE L1 2686 3358 -3024 2216 200 61 7 chr2 84278496 84278960 -166408894 + MLT2B1 LTR ERVL 1 534 -20 504 72 0 0 chr2 84278961 84279030 -166408824 + (TTTC)n Simple_repeat Simple_repeat 4 72 0 250 158 18 18 chr2 84279037 84279094 -166408760 + MLT2C1 LTR ERVL 341 397 0 5608 233 75 39 chr2 84279094 84281171 -166406683 + L1M4c LINE L1 3356 5508 -874 210 143 0 0 chr2 84281181 84281216 -166406638 + (CA)n Simple_repeat Simple_repeat 2 36 0 256 194 0 32 chr2 84281226 84281288 -166406566 + L1MB3 LINE L1 5154 5213 -933 1612 203 7 0 chr2 84281291 84281572 -166406282 + AluJo SINE Alu 6 288 -24 1929 197 97 89 chr2 84281588 84282550 -166405304 + L1PA16 LINE L1 5191 6166 0 914 191 6 6 chr2 84282540 84282718 -166405136 + L1MB3 LINE L1 5814 5991 -192 * 2326 143 88 9 chr2 84282718 84283168 -166404686 + MER1A DNA MER1_type 1 528 -1 715 188 44 6 chr2 84283170 84283330 -166404524 + L1MB3 LINE L1 6016 6181 -2 403 301 57 67 chr2 84283930 84284123 -166403731 - LTR16C LTR ERVL 0 491 301 2325 75 13 13 chr2 84284556 84284863 -166402991 - AluSp SINE Alu -6 307 1 314 337 31 0 chr2 84285328 84285426 -166402428 - ERVL LTR ERVL -4180 1584 1484 21 36 0 0 chr2 84286259 84286287 -166401567 + AT_rich Low_complexity Low_complexity 1 28 0 2046 123 18 0 chr2 84286297 84286581 -166401273 + AluSx SINE Alu 3 291 -21 687 261 60 37 chr2 84287637 84287855 -166399999 - MER58A DNA MER1_type 0 224 2 354 349 68 7 chr2 84288021 84288167 -166399687 - L2 LINE L2 -4 3268 3114 219 253 253 25 chr2 84288666 84288824 -166399030 - MIR SINE MIR -29 233 40 1264 329 62 78 chr2 84289383 84289758 -166398096 - ERVL LTR ERVL -3275 2489 2109 2043 145 16 0 chr2 84289758 84290061 -166397793 + AluSx SINE Alu 5 312 0 270 0 0 0 chr2 84290064 84290094 -166397760 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 1264 329 62 78 chr2 84290094 84291081 -166396773 - ERVL LTR ERVL -3657 2107 1145 281 311 8 8 chr2 84292030 84292149 -166395705 - LTR33A LTR ERVL 0 523 405 365 125 111 28 chr2 84292368 84292440 -166395414 - LTR33A LTR ERVL -342 181 104 1958 188 46 28 chr2 84292551 84293098 -166394756 + MLT2A2 LTR ERVL 1 554 0 2185 117 7 0 chr2 84293210 84293510 -166394344 - AluSq SINE Alu -9 304 3 191 319 121 60 chr2 84293532 84293714 -166394140 + MIR SINE MIR 10 202 -60 1823 121 3 37 chr2 84294014 84294312 -166393542 - AluSc SINE Alu -17 292 5 25 0 0 0 chr2 84295921 84295946 -166391908 + AT_rich Low_complexity Low_complexity 1 25 0 663 306 19 5 chr2 84296195 84296401 -166391453 + MER63A DNA MER1_type 2 210 0 440 243 120 14 chr2 84296758 84296923 -166390931 + MER5A DNA MER1_type 4 189 0 391 230 115 0 chr2 84297218 84297331 -166390523 + L1ME4a LINE L1 5963 6088 -33 2164 121 0 16 chr2 84297360 84297674 -166390180 + AluSg SINE Alu 1 309 -1 24 0 0 0 chr2 84297912 84297936 -166389918 + AT_rich Low_complexity Low_complexity 1 24 0 309 299 74 0 chr2 84298439 84298575 -166389279 - L1ME3A LINE L1 -230 5940 5792 440 77 15 0 chr2 84299507 84299572 -166388282 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 2247 76 0 0 chr2 84299573 84299849 -166388005 - AluSg SINE Alu -19 291 16 426 323 92 15 chr2 84300085 84300280 -166387574 + MIR SINE MIR 46 255 -7 212 295 13 0 chr2 84300964 84301042 -166386812 + (TATG)n Simple_repeat Simple_repeat 2 80 0 273 289 195 0 chr2 84301174 84301302 -166386552 + MIR SINE MIR 110 262 0 228 321 0 0 chr2 84301476 84301532 -166386322 - L3 LINE CR1 -23 1554 1499 555 267 113 5 chr2 84302098 84302293 -166385561 + MIR SINE MIR 46 261 -1 220 286 29 67 chr2 84303040 84303145 -166384709 - MIR3 SINE MIR -103 105 5 185 250 214 24 chr2 84303640 84303724 -166384130 - MIR SINE MIR -68 140 41 2719 233 19 12 chr2 84304627 84305276 -166382578 + MER82 DNA MER2_type 1 653 0 301 284 64 0 chr2 84305930 84306039 -166381815 + L1ME4a LINE L1 5931 6046 -75 589 323 45 32 chr2 84307145 84307545 -166380309 + MLT1I LTR MaLR 1 405 -4 1047 158 0 0 chr2 84307651 84307822 -166380032 + MER2 DNA MER2_type 1 171 -174 2146 102 14 60 chr2 84308073 84308425 -166379429 - MER1B DNA MER1_type -1 336 1 242 342 84 32 chr2 84308720 84308836 -166379018 - MIR SINE MIR -98 164 37 1964 202 87 15 chr2 84308836 84309306 -166378548 - MLT1D LTR MaLR -1 504 1 242 342 84 32 chr2 84309306 84309344 -166378510 - MIR SINE MIR -225 37 2 827 158 7 43 chr2 84309482 84309621 -166378233 + AluJo SINE Alu 1 134 -178 224 266 76 0 chr2 84309736 84309815 -166378039 - MIR SINE MIR -108 154 70 2463 219 63 52 chr2 84310156 84310938 -166376916 + L1MDa LINE L1 115 904 -5636 1162 175 80 16 chr2 84310956 84311243 -166376611 + L1MD1 LINE L1 5936 6359 0 1792 186 0 20 chr2 84311303 84311604 -166376250 - AluJo SINE Alu -17 295 1 186 197 148 0 chr2 84312182 84312243 -166375611 - MIR SINE MIR -65 197 128 189 229 42 21 chr2 84314467 84314515 -166373339 - L2 LINE L2 -1 3312 3264 13606 44 8 1 chr2 84314734 84317189 -166370665 - L1PA5 LINE L1 -4 6150 3684 462 326 88 24 chr2 84317788 84318162 -166369692 + LTR33 LTR ERVL 12 409 -112 21 0 0 0 chr2 84320326 84320347 -166367507 + AT_rich Low_complexity Low_complexity 1 21 0 1247 323 71 45 chr2 84322465 84323038 -166364816 + ERVL LTR ERVL 3388 3945 -1581 1959 158 50 14 chr2 84323038 84323400 -166364454 - THE1C LTR MaLR 0 375 1 1247 323 71 45 chr2 84323400 84323916 -166363938 + ERVL LTR ERVL 3945 4543 -983 338 94 16 0 chr2 84323982 84324046 -166363808 + (CAAAAA)n Simple_repeat Simple_repeat 2 66 0 319 302 53 24 chr2 84324058 84324227 -166363627 + MIR SINE MIR 3 176 -86 254 298 36 12 chr2 84325927 84326011 -166361843 - MER81 DNA DNA -22 92 7 501 59 24 12 chr2 84326255 84326340 -166361514 + L1MA4A LINE L1 6216 6301 -2 236 321 0 0 chr2 84326833 84326914 -166360940 + (CA)n Simple_repeat Simple_repeat 1 81 0 226 156 22 0 chr2 84327901 84327946 -166359908 + A-rich Low_complexity Low_complexity 1 46 0 2121 122 0 0 chr2 84328596 84328883 -166358971 + AluSq SINE Alu 1 287 -26 246 238 167 0 chr2 84329883 84329967 -166357887 - MIR SINE MIR -62 146 49 275 331 57 51 chr2 84330108 84330265 -166357589 - MIR SINE MIR -37 225 68 219 262 33 0 chr2 84330255 84330316 -166357538 - MIR SINE MIR 0 262 200 * 22 0 0 0 chr2 84330588 84330610 -166357244 + AT_rich Low_complexity Low_complexity 1 22 0 2998 133 58 9 chr2 84330881 84331539 -166356315 + LTR1 LTR ERV1 1 785 0 458 236 0 31 chr2 84331631 84331758 -166356096 - MER103 DNA DNA -6 160 38 2444 68 7 7 chr2 84331947 84332257 -166355597 - AluY SINE Alu -1 310 1 2074 125 26 7 chr2 84332657 84332961 -166354893 - AluSg SINE Alu 0 310 1 638 251 91 9 chr2 84333205 84333424 -166354430 + MLT1E1 LTR MaLR 10 246 -408 771 138 0 0 chr2 84333433 84333556 -166354298 - L1MA1 LINE L1 0 6302 6180 2349 137 17 0 chr2 84333556 84333964 -166353890 + L1MA1 LINE L1 5559 5973 -329 899 224 137 12 chr2 84333998 84334319 -166353535 + MLT1E1 LTR MaLR 294 654 0 2096 98 3 78 chr2 84334320 84334655 -166353199 + AluSg SINE Alu 1 310 0 389 338 31 44 chr2 84334671 84334896 -166352958 - L1MEd LINE L1 -4896 1235 1014 1762 79 39 0 chr2 84334979 84335208 -166352646 + AluSq SINE Alu 1 238 -75 261 0 0 0 chr2 84335212 84335241 -166352613 + (A)n Simple_repeat Simple_repeat 1 29 0 532 243 94 60 chr2 84335244 84335511 -166352343 - L1MEd LINE L1 -5158 961 686 21 0 0 0 chr2 84335668 84335689 -166352165 + AT_rich Low_complexity Low_complexity 1 21 0 346 344 55 12 chr2 84335760 84336016 -166351838 - L1MEd LINE L1 -5772 347 81 215 293 0 73 chr2 84336090 84336172 -166351682 - L3 LINE CR1 -18 1559 1484 193 326 122 15 chr2 84336160 84336356 -166351498 - MIR SINE MIR 0 262 46 * 304 301 112 14 chr2 84336619 84336762 -166351092 - L3 LINE CR1 -360 1217 1061 1819 210 44 38 chr2 84337347 84337824 -166350030 - MLT1D LTR MaLR 0 505 26 404 286 134 38 chr2 84338324 84338562 -166349292 + MIR SINE MIR 2 262 0 206 320 136 62 chr2 84340739 84341305 -166346549 - L2 LINE L2 -987 2327 1720 222 344 70 21 chr2 84341717 84341903 -166345951 - MIR SINE MIR -12 250 56 231 222 8 205 chr2 84342583 84342700 -166345154 + MIR SINE MIR 48 141 -121 447 251 162 76 chr2 84343076 84343200 -166344654 + MLT1G1 LTR MaLR 67 179 -416 186 43 0 0 chr2 84343200 84343223 -166344631 + (TA)n Simple_repeat Simple_repeat 1 23 0 2390 58 0 10 chr2 84343223 84343512 -166344342 - AluY SINE Alu -25 286 1 447 251 162 76 chr2 84343512 84343878 -166343976 + MLT1G1 LTR MaLR 178 595 0 2141 92 44 0 chr2 84344390 84344683 -166343171 - AluY SINE Alu -5 306 1 1556 140 30 119 chr2 84344883 84345211 -166342643 - AluJo SINE Alu -13 299 1 186 367 86 44 chr2 84345395 84346119 -166341735 + L2 LINE L2 2069 2822 -492 245 302 95 43 chr2 84346417 84346533 -166341321 + L2 LINE L2 3182 3303 -10 668 190 88 74 chr2 84347176 84347392 -166340462 - MER58A DNA MER1_type -1 223 5 656 272 67 12 chr2 84348619 84349022 -166338832 + MLT1J2 LTR MaLR 2 448 -2 528 288 43 6 chr2 84349183 84349346 -166338508 - MIR SINE MIR -84 178 10 221 301 105 45 chr2 84350167 84350300 -166337554 - MIR SINE MIR -73 189 49 13665 170 33 14 chr2 84350849 84353220 -166334634 + L1M1 LINE L1 18 2343 -5222 242 29 29 0 chr2 84353220 84353255 -166334599 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 13665 170 33 14 chr2 84353255 84355850 -166332004 + L1M1 LINE L1 2343 5145 -2420 643 136 0 0 chr2 84355852 84355962 -166331892 + L1M1 LINE L1 5869 5978 -1587 272 29 0 0 chr2 84355966 84356000 -166331854 + L1MA1 LINE L1 3724 3757 -2389 291 57 0 0 chr2 84356000 84356035 -166331819 - THE1A LTR MaLR -1 354 320 1215 92 6 0 chr2 84356035 84356209 -166331645 - THE1B-int LTR MaLR -1405 175 1 1865 139 75 20 chr2 84356209 84356554 -166331300 - THE1B LTR MaLR 0 364 1 8016 162 17 11 chr2 84356554 84357852 -166330002 + L1MA1 LINE L1 3752 5066 -1238 2233 85 4 0 chr2 84357852 84358173 -166329681 + AluY SINE Alu 1 322 0 8016 162 17 11 chr2 84358173 84358884 -166328970 + L1MA1 LINE L1 5066 5771 -533 1835 130 45 9 chr2 84358997 84359327 -166328527 + L1MA1 LINE L1 5960 6301 -1 21 36 0 0 chr2 84359347 84359375 -166328479 + AT_rich Low_complexity Low_complexity 1 28 0 3488 159 64 29 chr2 84359930 84360632 -166327222 + LTR8A LTR ERV1 1 727 0 315 317 49 0 chr2 84360712 84360794 -166327060 + MIR SINE MIR 12 97 -165 13079 142 19 55 chr2 84360878 84364384 -166323470 + L1PA8 LINE L1 10 3429 -3032 6138 108 18 42 chr2 84364384 84366166 -166321688 + L1PA8 LINE L1 4715 6481 -6 484 292 15 0 chr2 84366745 84366875 -166320979 - MER58B DNA MER1_type -16 325 194 25 31 0 0 chr2 84366878 84366910 -166320944 + AT_rich Low_complexity Low_complexity 1 32 0 465 302 120 65 chr2 84367501 84367954 -166319900 + L2 LINE L2 1515 2007 -1307 504 132 0 0 chr2 84367954 84368030 -166319824 - MADE1 DNA Mariner 0 80 5 465 302 120 65 chr2 84368030 84368142 -166319712 + L2 LINE L2 2007 2111 -1203 2083 131 3 3 chr2 84370246 84370552 -166317302 + AluSx SINE Alu 5 310 -2 219 242 32 32 chr2 84370732 84370794 -166317060 + L2 LINE L2 3251 3312 -1 2332 177 29 5 chr2 84371454 84371872 -166315982 + MSTA LTR MaLR 1 428 0 320 274 179 0 chr2 84372347 84372453 -166315401 + L2 LINE L2 3148 3272 0 715 312 210 17 chr2 84372939 84373529 -166314325 - L2 LINE L2 -475 2839 2136 5884 241 57 41 chr2 84373719 84377903 -166309951 - L1MD1 LINE L1 0 6636 2385 1263 188 46 68 chr2 84377933 84378064 -166309790 - L1MA9 LINE L1 -38 6274 6142 2316 101 0 0 chr2 84378064 84378362 -166309492 + AluSc SINE Alu 1 298 -11 1263 188 46 68 chr2 84378362 84378767 -166309087 - L1MA9 LINE L1 -170 6142 5619 2253 174 43 20 chr2 84378769 84379517 -166308337 + L1MA9 LINE L1 4855 5614 -698 2168 204 155 6 chr2 84379519 84380236 -166307618 - L1MD1 LINE L1 -4146 2394 1571 5008 182 110 7 chr2 84380264 84381873 -166305981 - L1PA15 LINE L1 0 6165 4379 2507 275 65 23 chr2 84381877 84382619 -166305235 - L1PA13 LINE L1 -6014 773 1 4552 245 96 35 chr2 84382655 84382764 -166305090 - L1MD1 LINE L1 -4955 1585 1484 1015 93 37 0 chr2 84382764 84382925 -166304929 - L1MA5A LINE L1 -12 6285 6119 4552 245 96 35 chr2 84382925 84384295 -166303559 - L1MD1 LINE L1 -5056 1484 16 204 392 0 0 chr2 84384546 84384666 -166303188 - L2 LINE L2 -1442 1872 1753 235 362 16 16 chr2 84385803 84385930 -166301924 - L3 LINE CR1 -214 1363 1237 297 335 123 32 chr2 84386502 84386818 -166301036 - L3 LINE CR1 -397 1180 836 454 307 79 21 chr2 84387409 84387689 -166300165 + L1ME2 LINE L1 24 319 -6077 1096 141 6 6 chr2 84387700 84387870 -166299984 + AluSx SINE Alu 14 183 -129 2219 288 96 31 chr2 84388027 84391341 -166296513 + L1ME2 LINE L1 1679 5204 -1011 188 35 35 0 chr2 84391481 84391510 -166296344 + (TTATA)n Simple_repeat Simple_repeat 5 34 0 502 0 138 6 chr2 84391514 84391673 -166296181 + (TA)n Simple_repeat Simple_repeat 1 180 0 253 227 13 53 chr2 84391688 84391763 -166296091 - L1ME LINE L1 -635 5535 5464 1431 224 81 28 chr2 84391781 84392249 -166295605 + L1ME2 LINE L1 5599 6091 -142 1237 277 106 50 chr2 84392267 84392784 -166295070 - MLT1E2 LTR MaLR 0 626 81 418 255 117 0 chr2 84392679 84392824 -166295030 - MLT2C1 LTR ERVL -192 205 44 * 258 314 29 0 chr2 84392878 84392983 -166294871 + L1ME2 LINE L1 6117 6224 -9 358 165 68 19 chr2 84393416 84393519 -166294335 - Charlie5 DNA MER1_type 0 2619 2512 1047 239 5 5 chr2 84393896 84394109 -166293745 + MER58A DNA MER1_type 6 218 -6 506 180 0 74 chr2 84394119 84394241 -166293613 + Charlie5 DNA MER1_type 7 119 -2493 251 191 0 0 chr2 84394243 84394290 -166293564 - MLT2D LTR ERVL -1 463 417 890 233 74 22 chr2 84394350 84394620 -166293234 - MLT2D LTR ERVL -48 366 83 353 128 105 0 chr2 84394664 84394769 -166293085 + Charlie5 DNA MER1_type 2359 2514 -98 629 190 23 11 chr2 84395197 84395371 -166292483 + CT-rich Low_complexity Low_complexity 1 176 0 365 315 42 6 chr2 84396354 84396519 -166291335 + LTR16C LTR ERVL 320 490 -1 1595 165 107 26 chr2 84397577 84397923 -166289931 + MLT1A2 LTR MaLR 1 374 0 247 367 17 17 chr2 84399044 84399164 -166288690 - L2 LINE L2 -7 3265 3146 339 355 0 0 chr2 84399431 84399541 -166288313 - MIR SINE MIR -67 141 32 2285 109 0 6 chr2 84400608 84400920 -166286934 + AluSg SINE Alu 1 310 0 879 302 75 29 chr2 84401990 84402401 -166285453 + MLT1K LTR MaLR 10 439 -149 726 272 54 22 chr2 84402413 84402637 -166285217 - MIR SINE MIR -31 231 1 28 29 0 0 chr2 84403147 84403182 -166284672 + AT_rich Low_complexity Low_complexity 1 35 0 2117 181 18 36 chr2 84403437 84403539 -166284315 - Tigger2a DNA MER2_type -2274 434 332 557 75 0 12 chr2 84403539 84403619 -166284235 + MADE1 DNA Mariner 1 79 -1 2117 181 18 36 chr2 84403619 84403957 -166283897 - Tigger2a DNA MER2_type -2376 332 2 325 276 59 40 chr2 84406646 84406904 -166280950 - L1MEd LINE L1 -5079 1050 800 25 65 0 0 chr2 84406977 84407023 -166280831 + AT_rich Low_complexity Low_complexity 1 46 0 312 232 111 0 chr2 84408213 84408312 -166279542 + MER103 DNA DNA 55 164 -2 315 328 53 8 chr2 84408634 84408765 -166279089 - MIR SINE MIR -71 191 55 320 176 29 69 chr2 84408999 84409101 -166278753 - MIR SINE MIR -1 261 164 221 327 150 36 chr2 84409137 84409357 -166278497 - MIR SINE MIR -15 247 3 274 335 96 8 chr2 84410064 84410368 -166277486 + MLT1I LTR MaLR 59 409 0 336 24 0 0 chr2 84411022 84411063 -166276791 + (TG)n Simple_repeat Simple_repeat 1 41 0 437 208 42 33 chr2 84412001 84412121 -166275733 + MLT1C LTR MaLR 10 130 -337 288 53 0 0 chr2 84413138 84413176 -166274678 + (TG)n Simple_repeat Simple_repeat 2 39 0 2293 217 55 73 chr2 84413176 84413955 -166273899 - L1MD2 LINE L1 -227 6132 5368 961 294 25 7 chr2 84413997 84414283 -166273571 - MER110 LTR ERV1 -30 461 171 34 0 0 0 chr2 84414328 84414362 -166273492 + AT_rich Low_complexity Low_complexity 1 34 0 230 340 53 26 chr2 84414509 84414850 -166273004 - L1 LINE L1 -2318 3828 3479 842 287 15 4 chr2 84415272 84415533 -166272321 + LTR16A LTR ERVL 181 444 -6 1541 244 59 99 chr2 84417527 84418141 -166269713 + MLT1E LTR MaLR 3 591 -2 1907 141 40 45 chr2 84420297 84420674 -166267180 + THE1C LTR MaLR 1 375 0 2087 108 10 7 chr2 84421203 84421500 -166266354 - AluSc SINE Alu -11 298 1 202 308 55 55 chr2 84422445 84422536 -166265318 + MER5A DNA MER1_type 99 189 0 269 218 138 34 chr2 84423879 84424024 -166263830 - MIR SINE MIR -58 204 20 721 276 94 31 chr2 84424323 84424857 -166262997 - MLT1H LTR MaLR -1 554 11 456 333 112 35 chr2 84424920 84425268 -166262586 - L2 LINE L2 -12 3301 2927 22 35 0 0 chr2 84425832 84425861 -166261993 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 84426671 84426694 -166261160 + AT_rich Low_complexity Low_complexity 1 23 0 2215 130 0 0 chr2 84426880 84427180 -166260674 - AluSx SINE Alu -12 300 1 200 299 78 13 chr2 84427457 84427534 -166260320 + L2 LINE L2 3149 3230 -42 1995 154 0 0 chr2 84429564 84429850 -166258004 + AluSg SINE Alu 1 286 -24 476 323 30 18 chr2 84430328 84430492 -166257362 - LTR33 LTR ERVL -304 217 52 5556 182 22 16 chr2 84430954 84432555 -166255299 + L1MA4A LINE L1 4170 5782 -521 23949 65 19 0 chr2 84432571 84436508 -166251346 + L1PA6 LINE L1 2139 6151 -3 2541 146 57 16 chr2 84436525 84437032 -166250822 + L1MA4A LINE L1 5769 6296 -7 284 261 34 13 chr2 84437062 84437252 -166250602 - LTR37B LTR ERV1 -81 383 198 235 248 34 17 chr2 84437636 84437753 -166250101 + (TA)n Simple_repeat Simple_repeat 2 120 0 22 35 0 0 chr2 84437912 84437941 -166249913 + AT_rich Low_complexity Low_complexity 1 29 0 635 237 53 0 chr2 84438144 84438275 -166249579 + Tigger7 DNA MER2_type 129 266 -284 571 163 10 10 chr2 84438274 84438372 -166249482 + Tigger7 DNA MER2_type 2394 2491 0 * 28617 134 9 59 chr2 84438691 84439121 -166248733 + L1PA8A LINE L1 3 453 -5678 189 0 0 0 chr2 84439121 84439142 -166248712 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 28617 134 9 59 chr2 84439142 84444919 -166242935 + L1PA8A LINE L1 453 5889 -242 336 115 0 0 chr2 84445016 84445068 -166242786 - L1PA8 LINE L1 -8 6164 6113 555 307 53 21 chr2 84446028 84446217 -166241637 - MER82 DNA MER2_type -25 628 434 242 339 34 10 chr2 84446227 84446362 -166241492 + MIR SINE MIR 18 154 -54 334 264 22 11 chr2 84446492 84446583 -166241271 - MER82 DNA MER2_type -561 92 1 1457 287 43 16 chr2 84446873 84447364 -166240490 - REP3 LTR ERV -37 525 22 282 95 0 0 chr2 84447969 84448011 -166239843 + (CA)n Simple_repeat Simple_repeat 1 42 0 2314 109 0 0 chr2 84448211 84448523 -166239331 + AluSx SINE Alu 1 312 0 261 320 24 8 chr2 84448544 84448669 -166239185 + L1MC4a LINE L1 4466 4592 -1554 260 253 126 0 chr2 84448950 84449045 -166238809 + L1P LINE L1 4904 5010 -1136 22 35 0 0 chr2 84449272 84449301 -166238553 + AT_rich Low_complexity Low_complexity 1 29 0 564 213 81 71 chr2 84449337 84449443 -166238411 + L1MC4a LINE L1 5282 5385 -781 2428 63 3 0 chr2 84449443 84449743 -166238111 + AluY SINE Alu 1 301 -10 564 213 81 71 chr2 84449743 84449951 -166237903 + L1MC4a LINE L1 5385 5597 -569 404 254 113 47 chr2 84449970 84450226 -166237628 + L1MC4a LINE L1 5694 5966 -1842 348 198 18 9 chr2 84451199 84451310 -166236544 + (TA)n Simple_repeat Simple_repeat 1 112 0 1190 222 86 11 chr2 84451341 84451620 -166236234 - MER39 LTR ERV1 -51 656 357 261 299 110 12 chr2 84451588 84451735 -166236119 - MER39 LTR ERV1 -359 183 24 * 217 196 20 20 chr2 84451740 84451791 -166236063 + (CATATA)n Simple_repeat Simple_repeat 6 56 0 306 135 67 56 chr2 84451795 84451884 -166235970 - L1MC4 LINE L1 -1339 6703 6614 243 268 207 24 chr2 84452110 84452274 -166235580 + MIR SINE MIR 65 258 -4 377 361 43 4 chr2 84454048 84454278 -166233576 + L1MEd LINE L1 488 726 -5393 273 274 44 18 chr2 84454430 84454543 -166233311 + L1ME1 LINE L1 6042 6157 -9 302 285 70 16 chr2 84454591 84454833 -166233021 + L1MEd LINE L1 2938 3192 -2937 246 277 140 70 chr2 84455228 84455533 -166232321 + L2 LINE L2 2222 2549 -765 665 249 67 6 chr2 84455533 84455698 -166232156 - MER5B DNA MER1_type 0 178 4 196 392 32 32 chr2 84456066 84456191 -166231663 + L2 LINE L2 2943 3067 -205 2269 100 13 0 chr2 84456213 84456513 -166231341 - AluSx SINE Alu -8 304 1 356 291 146 18 chr2 84459328 84459493 -166228361 + MIR SINE MIR 23 208 -54 207 340 29 0 chr2 84459611 84459714 -166228140 + MIR SINE MIR 24 129 -79 1061 275 55 45 chr2 84461808 84462429 -166225425 + L1MCa LINE L1 871 1497 -4929 624 280 80 17 chr2 84462418 84462657 -166225197 + L1ME1 LINE L1 5804 6057 -109 * 50 42 0 0 chr2 84462657 84462728 -166225126 + AT_rich Low_complexity Low_complexity 1 71 0 11312 168 17 7 chr2 84462728 84466003 -166221851 - L1MA2 LINE L1 0 6304 2997 298 303 46 0 chr2 84466010 84466119 -166221735 + L1ME1 LINE L1 6051 6164 -2 21 0 0 0 chr2 84466218 84466239 -166221615 + AT_rich Low_complexity Low_complexity 1 21 0 2208 112 3 0 chr2 84466247 84466541 -166221313 + AluSx SINE Alu 17 311 -1 285 342 9 18 chr2 84466651 84466762 -166221092 - MIR3 SINE MIR -41 167 58 2063 72 0 7 chr2 84467361 84467639 -166220215 + AluY SINE Alu 2 277 -34 1042 189 11 0 chr2 84467678 84467863 -166219991 - AluJb SINE Alu -8 304 118 753 293 72 52 chr2 84468210 84468668 -166219186 + LTR33 LTR ERVL 1 467 -54 22 0 0 0 chr2 84468950 84468972 -166218882 + AT_rich Low_complexity Low_complexity 1 22 0 304 273 50 29 chr2 84469821 84469960 -166217894 - MLT1J1 LTR MaLR -52 394 253 2174 113 3 0 chr2 84470546 84470847 -166217007 + AluSg SINE Alu 5 306 -4 22 0 0 0 chr2 84471305 84471327 -166216527 + AT_rich Low_complexity Low_complexity 1 22 0 340 24 0 0 chr2 84471341 84471382 -166216472 - MLT2A1 LTR ERVL 0 453 413 381 58 0 0 chr2 84471382 84471434 -166216420 + (TA)n Simple_repeat Simple_repeat 2 53 0 2461 85 12 6 chr2 84471441 84471782 -166216072 - MLT2A1 LTR ERVL -101 343 1 401 143 0 0 chr2 84472514 84472577 -166215277 + AluJ/FRAM SINE Alu 232 294 -18 386 348 77 18 chr2 84473483 84473704 -166214150 + MIR SINE MIR 2 235 -27 1009 193 21 26 chr2 84474682 84474874 -166212980 + AluJo SINE Alu 2 192 -120 187 333 206 16 chr2 84475375 84475501 -166212353 + MER5A DNA MER1_type 16 165 -24 * 205 340 132 9 chr2 84475396 84475502 -166212352 - MER5A DNA MER1_type -25 164 46 1255 225 100 14 chr2 84475971 84476322 -166211532 - LTR50 LTR ERVL -6 789 409 432 174 0 35 chr2 84476457 84476543 -166211311 + MLT2D LTR ERVL 1 83 -331 * 977 213 169 30 chr2 84476521 84476887 -166210967 - LTR50 LTR ERVL -296 499 83 1430 244 22 85 chr2 84477765 84478260 -166209594 + MLT2B1 LTR ERVL 1 464 -56 29 47 0 0 chr2 84478279 84478322 -166209532 + AT_rich Low_complexity Low_complexity 1 43 0 357 95 18 15 chr2 84478325 84478402 -166209452 + MLT2C1 LTR ERVL 350 397 0 187 300 90 10 chr2 84478777 84478877 -166208977 + MIR3 SINE MIR 101 208 0 210 71 0 0 chr2 84479133 84479161 -166208693 + (T)n Simple_repeat Simple_repeat 1 28 0 347 342 0 0 chr2 84479456 84479573 -166208281 + MER103 DNA DNA 2 118 -48 256 302 56 22 chr2 84480048 84480227 -166207627 - L1MC/D LINE L1 -2072 5736 5552 26 0 0 0 chr2 84480253 84480279 -166207575 + AT_rich Low_complexity Low_complexity 1 26 0 561 9 85 0 chr2 84480289 84480395 -166207459 + (TTTAA)n Simple_repeat Simple_repeat 2 116 0 22 35 0 0 chr2 84480451 84480480 -166207374 + AT_rich Low_complexity Low_complexity 1 29 0 1839 157 7 7 chr2 84480542 84480841 -166207013 + AluSx SINE Alu 5 303 -9 22 35 0 0 chr2 84481310 84481339 -166206515 + AT_rich Low_complexity Low_complexity 1 29 0 320 83 71 12 chr2 84482056 84482140 -166205714 + (TA)n Simple_repeat Simple_repeat 2 90 0 314 256 33 11 chr2 84482142 84482232 -166205622 + L1MC4 LINE L1 6612 6703 -1339 237 224 17 0 chr2 84482237 84482295 -166205559 - L1MCa LINE L1 -4362 2064 2006 * 270 264 0 22 chr2 84482292 84482383 -166205471 + L1MC4 LINE L1 6614 6702 -1340 268 256 47 0 chr2 84482334 84482420 -166205434 - L1MC4 LINE L1 -1339 6703 6614 * 228 239 0 14 chr2 84482401 84482472 -166205382 - L1MCa LINE L1 -4362 2064 1995 * 246 216 0 0 chr2 84482448 84482499 -166205355 - L1MC4 LINE L1 -1339 6983 6933 375 250 0 0 chr2 84482500 84482600 -166205254 + (CATA)n Simple_repeat Simple_repeat 4 103 0 239 298 0 43 chr2 84482608 84482702 -166205152 - L1MC4 LINE L1 -1339 6703 6614 * 261 312 0 0 chr2 84482688 84482781 -166205073 + L1MC4 LINE L1 6614 6706 -1336 233 271 47 0 chr2 84482716 84482801 -166205053 - L1MC4 LINE L1 -1339 6703 6615 * 255 259 47 0 chr2 84482818 84482903 -166204951 - L1MC4 LINE L1 -1339 6703 6615 * 256 270 45 0 chr2 84482828 84482917 -166204937 + L1MC4 LINE L1 6614 6706 -1336 237 196 0 0 chr2 84482920 84482971 -166204883 + (TA)n Simple_repeat Simple_repeat 1 51 0 644 240 41 0 chr2 84482972 84483168 -166204686 - L1M4c LINE L1 -4164 2220 2017 7551 235 65 55 chr2 84483180 84483596 -166204258 + L1M4 LINE L1 2372 2782 -3396 493 31 0 0 chr2 84483596 84483660 -166204194 + AluY SINE Alu 234 297 -12 7551 235 65 55 chr2 84483660 84486277 -166201577 + L1M4 LINE L1 2782 5497 -681 232 333 13 0 chr2 84486278 84486356 -166201498 - MER2 DNA MER2_type 0 345 267 258 32 0 0 chr2 84486575 84486606 -166201248 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 509 326 153 14 chr2 84486894 84487247 -166200607 + L2 LINE L2 2912 3313 0 219 274 11 42 chr2 84488782 84488877 -166198977 + L2 LINE L2 3104 3195 -118 616 172 0 0 chr2 84488963 84489062 -166198792 + FLAM_A SINE Alu 2 100 -42 471 302 63 40 chr2 84489711 84489963 -166197891 - L1ME3A LINE L1 -231 5939 5682 237 159 0 0 chr2 84490213 84490257 -166197597 + GA-rich Low_complexity Low_complexity 4 47 0 2142 169 34 10 chr2 84491665 84492072 -166195782 - MER47B DNA MER2_type -1 417 1 270 132 0 0 chr2 84492717 84492770 -166195084 + (T)n Simple_repeat Simple_repeat 1 53 0 1347 211 21 14 chr2 84493794 84494083 -166193771 - AluJo SINE Alu -21 291 1 189 74 0 0 chr2 84494322 84494349 -166193505 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 388 239 97 8 chr2 84494759 84494893 -166192961 + L1ME4a LINE L1 5974 6119 -2 2038 134 7 0 chr2 84494962 84495267 -166192587 + AluSx SINE Alu 1 307 -5 186 289 0 0 chr2 84495285 84495330 -166192524 - L2 LINE L2 -4 3309 3265 728 261 55 46 chr2 84495895 84496113 -166191741 - MER93a LTR ERV1 0 402 183 2013 273 23 29 chr2 84496308 84497097 -166190757 - L1PA12 LINE L1 -4673 2907 2183 394 288 8 8 chr2 84497767 84497899 -166189955 - L1PA12 LINE L1 -5276 2298 2167 977 372 18 34 chr2 84497911 84498532 -166189322 - L1PA12 LINE L1 -6175 1399 789 205 255 20 0 chr2 84498562 84498613 -166189241 + CT-rich Low_complexity Low_complexity 3 54 0 489 188 12 0 chr2 84498702 84498787 -166189067 + Tigger1 DNA MER2_type 2131 2216 -202 483 179 8 17 chr2 84498814 84498931 -166188923 + L1PA15-16 LINE L1 2078 2193 -4656 13666 152 18 17 chr2 84498936 84499059 -166188795 - Tigger1 DNA MER2_type 0 2418 2297 1610 213 3 0 chr2 84499059 84499360 -166188494 + AluJo SINE Alu 1 302 -10 13666 152 18 17 chr2 84499360 84501652 -166186202 - Tigger1 DNA MER2_type -121 2297 1 312 272 142 6 chr2 84502593 84502755 -166185099 - LTR33A LTR ERVL -6 517 334 579 276 53 27 chr2 84502826 84503051 -166184803 - LTR33A LTR ERVL -292 231 1 2070 197 97 4 chr2 84503104 84503566 -166184288 + MLT1D LTR MaLR 1 505 0 180 0 0 0 chr2 84504492 84504512 -166183342 + (A)n Simple_repeat Simple_repeat 1 20 0 306 257 69 62 chr2 84504902 84505046 -166182808 + MIR SINE MIR 95 239 -23 5503 67 44 13 chr2 84505348 84506105 -166181749 + LTR17 LTR ERV1 1 780 0 225 0 0 0 chr2 84506892 84506917 -166180937 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 247 193 0 0 chr2 84507267 84507324 -166180530 + (TA)n Simple_repeat Simple_repeat 2 58 0 700 189 42 0 chr2 84507497 84507640 -166180214 + LTR37A LTR ERV1 19 167 -259 578 180 23 16 chr2 84507719 84507847 -166180007 + LTR37A LTR ERV1 298 426 0 283 224 0 0 chr2 84508348 84508406 -166179448 - MIR3 SINE MIR -23 185 128 1489 180 11 4 chr2 84508890 84509168 -166178686 + MER49 LTR ERV1 1 280 -643 1489 212 41 28 chr2 84509164 84509556 -166178298 + MER4D LTR ERV1 507 903 0 215 271 0 17 chr2 84509705 84509764 -166178090 + L2 LINE L2 3161 3218 -95 2674 86 58 21 chr2 84509832 84510264 -166177590 - LTR7 LTR ERV1 -2 448 1 19419 108 19 18 chr2 84510264 84513827 -166174027 - HERVH LTR ERV1 0 7713 1 1780 96 249 25 chr2 84513829 84514195 -166173659 - LTR7 LTR ERV1 -2 448 1 372 62 47 0 chr2 84515113 84515177 -166172677 + (CA)n Simple_repeat Simple_repeat 1 67 0 30 0 0 0 chr2 84515358 84515388 -166172466 + AT_rich Low_complexity Low_complexity 1 30 0 235 196 0 0 chr2 84515504 84515555 -166172299 - LTR66 LTR ERVL -168 442 392 367 188 15 144 chr2 84515579 84515597 -166172257 - MIR SINE MIR -55 207 188 339 25 0 0 chr2 84515597 84515637 -166172217 + (CA)n Simple_repeat Simple_repeat 2 41 0 367 188 15 144 chr2 84515637 84515689 -166172165 - MIR SINE MIR -74 188 131 194 0 39 0 chr2 84515689 84515715 -166172139 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2867 24 0 0 chr2 84515718 84516054 -166171800 - L1PA2 LINE L1 -4 6151 5816 367 188 15 144 chr2 84516054 84516138 -166171716 - MIR SINE MIR -133 129 64 288 325 132 24 chr2 84516140 84516304 -166171550 - MIR SINE MIR -61 147 20 183 353 69 20 chr2 84517247 84517349 -166170505 - L3b LINE CR1 -42 1541 1435 29 60 0 0 chr2 84517643 84517693 -166170161 + AT_rich Low_complexity Low_complexity 1 50 0 238 315 0 0 chr2 84517878 84517951 -166169903 + MIR SINE MIR 184 256 -6 391 397 29 0 chr2 84518339 84518513 -166169341 - MIR SINE MIR -48 214 36 2225 191 24 5 chr2 84518597 84519015 -166168839 - MSTB LTR MaLR 0 426 1 1231 219 59 0 chr2 84519448 84519718 -166168136 + MER58B DNA MER1_type 56 341 0 379 205 36 12 chr2 84520238 84520321 -166167533 - MLT1B LTR MaLR -2 388 304 290 85 0 21 chr2 84520564 84520611 -166167243 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 358 241 17 103 chr2 84521102 84521276 -166166578 - MER58C DNA MER1_type -6 209 51 2126 132 0 3 chr2 84521317 84521620 -166166234 - AluSg SINE Alu -6 304 3 287 247 25 12 chr2 84522090 84522171 -166165683 - LTR58 LTR ERV1 -239 440 359 629 254 47 5 chr2 84522469 84522682 -166165172 - MER69 DNA AcHobo -1 2525 2304 1395 231 42 90 chr2 84522730 84523030 -166164824 - MER69 DNA AcHobo -228 2298 1985 1090 236 88 54 chr2 84523030 84523474 -166164380 - LTR40c LTR ERVL -2 463 5 1395 231 42 90 chr2 84523474 84523946 -166163908 - MER69 DNA AcHobo -541 1985 1562 2197 63 0 7 chr2 84523946 84524215 -166163639 + AluY SINE Alu 35 301 -10 1395 231 42 90 chr2 84524215 84524226 -166163628 - MER69 DNA AcHobo -964 1562 1552 838 290 26 29 chr2 84524226 84524536 -166163318 - LTR16C LTR ERVL -2 489 181 356 299 124 23 chr2 84524756 84524933 -166162921 - MER69 DNA AcHobo -944 282 88 807 305 17 65 chr2 84526873 84527290 -166160564 - L2 LINE L2 -47 3266 2870 21 57 0 0 chr2 84528231 84528266 -166159588 + AT_rich Low_complexity Low_complexity 1 35 0 866 211 16 0 chr2 84529369 84529554 -166158300 - MER5A DNA MER1_type -1 188 1 512 293 88 9 chr2 84530368 84530699 -166157155 + LTR16B LTR ERVL 57 413 -51 24 0 0 0 chr2 84530730 84530754 -166157100 + AT_rich Low_complexity Low_complexity 1 24 0 180 357 0 0 chr2 84531444 84531500 -166156354 + MIR SINE MIR 207 262 0 238 167 21 0 chr2 84531523 84531571 -166156283 + MIR SINE MIR 160 208 -54 192 40 0 0 chr2 84532443 84532468 -166155386 + (GA)n Simple_repeat Simple_repeat 2 26 0 844 296 29 0 chr2 84532987 84533230 -166154624 + MIR SINE MIR 13 262 0 2271 102 7 0 chr2 84533317 84533611 -166154243 + AluSx SINE Alu 1 296 -16 195 184 0 0 chr2 84533749 84533787 -166154067 + (CAT)n Simple_repeat Simple_repeat 1 38 0 390 204 112 20 chr2 84533797 84533895 -166153959 - MIR SINE MIR -23 239 133 303 131 279 0 chr2 84533903 84533964 -166153890 - Tigger5 DNA MER2_type -9 2314 2237 257 209 0 0 chr2 84533974 84534017 -166153837 - Tigger5 DNA MER2_type -2268 55 13 361 221 35 12 chr2 84534017 84534103 -166153751 - Tigger5 DNA MER2_type 0 2323 2236 337 328 24 0 chr2 84534103 84534228 -166153626 - MIR SINE MIR -134 128 1 2225 100 3 0 chr2 84534266 84534556 -166153298 - AluSp SINE Alu -22 291 1 222 156 0 0 chr2 84534790 84534835 -166153019 + (ATG)n Simple_repeat Simple_repeat 3 47 0 4139 123 10 8 chr2 84536035 84536646 -166151208 - LTR9 LTR ERV1 0 612 1 215 339 15 0 chr2 84536747 84536812 -166151042 - L3 LINE CR1 -738 839 774 197 225 0 0 chr2 84538687 84538727 -166149127 - L2 LINE L2 -4 3309 3270 615 111 65 23 chr2 84539307 84539428 -166148426 + (TA)n Simple_repeat Simple_repeat 1 115 -625 2410 61 0 3 chr2 84539428 84539723 -166148131 + AluY SINE Alu 3 296 -15 615 111 65 23 chr2 84539723 84540018 -166147836 + (TA)n Simple_repeat Simple_repeat 115 740 0 275 200 46 23 chr2 84540025 84540155 -166147699 + (TATAA)n Simple_repeat Simple_repeat 2 134 0 195 147 59 0 chr2 84540162 84540264 -166147590 + (TA)n Simple_repeat Simple_repeat 2 109 0 430 251 116 37 chr2 84540383 84540924 -166146930 + Charlie7 DNA MER1_type 1669 2306 -306 532 160 25 17 chr2 84540957 84541076 -166146778 - L1MB8 LINE L1 0 6178 6059 26 0 0 0 chr2 84541083 84541109 -166146745 + AT_rich Low_complexity Low_complexity 1 26 0 6989 112 13 8 chr2 84541115 84542278 -166145576 - L1MA1 LINE L1 -3 6299 5130 2485 57 3 19 chr2 84542588 84542904 -166144950 - AluY SINE Alu 0 311 1 24 0 0 0 chr2 84543213 84543237 -166144617 + AT_rich Low_complexity Low_complexity 1 24 0 519 280 63 30 chr2 84543300 84543582 -166144272 - L1ME3A LINE L1 -309 5869 5570 931 310 82 40 chr2 84543981 84544835 -166143019 + L2 LINE L2 2416 3313 0 226 342 44 0 chr2 84545061 84545175 -166142679 - MIR SINE MIR -73 189 71 235 260 0 0 chr2 84546743 84546793 -166141061 + GA-rich Low_complexity Low_complexity 3 52 0 641 265 29 6 chr2 84546918 84547088 -166140766 - MER5B DNA MER1_type -1 177 4 365 331 49 0 chr2 84547284 84547468 -166140386 + L1M4 LINE L1 4745 4937 -1209 976 214 11 0 chr2 84547520 84547707 -166140147 - HERVL74 LTR ERVL -4239 1446 1258 13667 171 29 11 chr2 84547715 84550816 -166137038 - L1MA2 LINE L1 0 7723 4489 2071 135 3 0 chr2 84550816 84551120 -166136734 + AluSx SINE Alu 3 307 -5 13667 171 29 11 chr2 84551120 84553061 -166134793 - L1MA2 LINE L1 -3234 4489 2584 6164 90 17 66 chr2 84553063 84554214 -166133640 + MER11B LTR ERVK 1 1071 0 5476 172 93 0 chr2 84554221 84555239 -166132615 - L1MA2 LINE L1 -4987 2578 1466 443 186 0 52 chr2 84555319 84555416 -166132438 - HERVL74 LTR ERVL -2619 937 846 2085 214 125 68 chr2 84555442 84556073 -166131781 - HERVL74 LTR ERVL -2887 669 3 518 274 16 58 chr2 84556231 84556421 -166131433 - LTR52 LTR ERVL -239 182 1 22 0 0 0 chr2 84556422 84556444 -166131410 + AT_rich Low_complexity Low_complexity 1 22 0 2878 163 19 23 chr2 84557981 84558552 -166129302 - L1MD1 LINE L1 -19 6223 5655 348 278 60 8 chr2 84558597 84558730 -166129124 - L1M4 LINE L1 -2582 3564 3425 341 371 49 27 chr2 84558723 84558955 -166128899 - L1MCb LINE L1 -5763 282 46 * 203 348 54 11 chr2 84559175 84559267 -166128587 - MIR SINE MIR -93 115 20 562 198 105 37 chr2 84559526 84559688 -166128166 - MER5A DNA MER1_type 0 189 17 206 271 104 31 chr2 84559765 84559861 -166127993 + MER5A DNA MER1_type 81 183 -6 2146 158 60 10 chr2 84559868 84560267 -166127587 - MER61C LTR ERV1 0 434 16 332 161 0 0 chr2 84560236 84560298 -166127556 - LTR28 LTR ERV1 -958 62 1 * 563 292 39 0 chr2 84560304 84560458 -166127396 - MER5B DNA MER1_type -3 175 16 459 35 0 0 chr2 84561364 84561421 -166126433 + (TC)n Simple_repeat Simple_repeat 2 58 0 210 37 0 0 chr2 84561420 84561447 -166126407 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 240 35 0 0 chr2 84561555 84561590 -166126264 + (TG)n Simple_repeat Simple_repeat 1 64 0 240 35 0 0 chr2 84561590 84561619 -166126235 + (TG)n Simple_repeat Simple_repeat 2 30 0 3595 244 87 31 chr2 84562348 84563177 -166124677 + L1M4 LINE L1 66 847 -5799 2073 127 3 3 chr2 84563177 84563477 -166124377 + AluSx SINE Alu 5 304 -8 3595 244 87 31 chr2 84563477 84564352 -166123502 + L1M4 LINE L1 847 1964 -4682 1503 149 226 6 chr2 84564352 84564701 -166123153 - MSTA LTR MaLR 0 428 3 3595 244 87 31 chr2 84564701 84565238 -166122616 + L1M4 LINE L1 1964 2470 -4176 720 118 47 5 chr2 84565238 84565450 -166122404 + (TA)n Simple_repeat Simple_repeat 1 221 0 219 36 0 0 chr2 84665574 84665602 -166022252 + (CA)n Simple_repeat Simple_repeat 2 29 0 251 219 0 126 chr2 84666911 84667030 -166020824 - MLT1H LTR MaLR -16 533 430 25 0 0 0 chr2 84675405 84675430 -166012424 + AT_rich Low_complexity Low_complexity 1 25 0 192 77 0 0 chr2 84675584 84675610 -166012244 + (CA)n Simple_repeat Simple_repeat 1 26 0 500 129 0 11 chr2 84677599 84677692 -166010162 + (TTCC)n Simple_repeat Simple_repeat 1 92 0 189 423 78 0 chr2 84677715 84677857 -166009997 + L2 LINE L2 3104 3256 -16 498 266 70 0 chr2 84678086 84678214 -166009640 + MER45A DNA AcHobo 34 170 -8 633 288 27 18 chr2 84678643 84678862 -166008992 + MIR SINE MIR 40 260 -2 620 328 131 25 chr2 84679475 84680276 -166007578 - L2 LINE L2 0 3313 2410 2147 118 0 7 chr2 84680328 84680625 -166007229 + AluSx SINE Alu 1 295 -17 231 114 0 0 chr2 84681063 84681098 -166006756 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 32 26 0 0 chr2 84681582 84681621 -166006233 + AT_rich Low_complexity Low_complexity 1 39 0 28 0 0 0 chr2 84681775 84681803 -166006051 + AT_rich Low_complexity Low_complexity 1 28 0 226 156 0 22 chr2 84682054 84682099 -166005755 + MLT1I LTR MaLR 317 360 -49 417 16 48 0 chr2 84683588 84683650 -166004204 + (CA)n Simple_repeat Simple_repeat 2 66 0 1031 163 17 6 chr2 84683946 84684124 -166003730 + MLT1C LTR MaLR 3 182 -285 412 152 40 20 chr2 84684137 84684236 -166003618 - L1MA7 LINE L1 -268 6023 5923 1189 139 0 14 chr2 84684236 84684440 -166003414 + L1MA7 LINE L1 6068 6279 -12 724 249 93 4 chr2 84684494 84684731 -166003123 + MLT1C LTR MaLR 205 462 -5 237 294 42 87 chr2 84684800 84685110 -166002744 - L1MCc LINE L1 -6103 320 25 234 167 83 17 chr2 84685165 84685225 -166002629 - L1MEc LINE L1 -3212 3003 2940 * 254 247 0 0 chr2 84685221 84685298 -166002556 + L1MC4 LINE L1 6627 6703 -1339 234 0 0 0 chr2 84685299 84685325 -166002529 + (TA)n Simple_repeat Simple_repeat 1 26 0 337 305 29 0 chr2 84685388 84685493 -166002361 - L1MEc LINE L1 -3388 2827 2720 * 518 241 129 72 chr2 84685491 84686172 -166001682 - L1MEc LINE L1 -5046 1350 631 366 245 29 4 chr2 84686178 84686330 -166001524 - MER20 DNA MER1_type -7 212 2 209 398 117 28 chr2 84687075 84687324 -166000530 - L2 LINE L2 -354 2960 2690 271 289 0 13 chr2 84687396 84687472 -166000382 - HAL1 LINE L1 -619 1888 1814 1860 282 23 43 chr2 84688039 84688157 -165999697 - L1ME1 LINE L1 -5 6230 6111 2185 132 27 16 chr2 84688157 84688528 -165999326 + THE1C LTR MaLR 1 375 0 1860 282 23 43 chr2 84688528 84689154 -165998700 - L1ME1 LINE L1 -124 6111 5501 1192 86 0 0 chr2 84689173 84689324 -165998530 - AluSg/x SINE Alu -5 307 157 1527 98 0 0 chr2 84689327 84689530 -165998324 - AluY SINE Alu -108 203 1 2533 258 38 38 chr2 84689549 84690883 -165996971 - L1ME1 LINE L1 -2958 3257 1959 2337 183 28 2 chr2 84690883 84691305 -165996549 - Tigger2a DNA MER2_type -1 433 1 2533 258 38 38 chr2 84691305 84691822 -165996032 - L1ME1 LINE L1 -4256 1959 1444 1888 284 53 56 chr2 84691884 84692973 -165994881 - L1ME1 LINE L1 -5222 1174 89 189 0 0 0 chr2 84693853 84693874 -165993980 + (TC)n Simple_repeat Simple_repeat 2 22 0 287 246 71 32 chr2 84694273 84694399 -165993455 + MER94 DNA DNA 1 131 -3 509 92 0 0 chr2 84695799 84695875 -165991979 - L1MA3 LINE L1 -2 6303 6228 51 17 0 0 chr2 84696512 84696570 -165991284 + AT_rich Low_complexity Low_complexity 1 58 0 248 338 47 47 chr2 84696628 84696776 -165991078 - MIR SINE MIR -106 156 9 320 312 110 17 chr2 84696902 84697075 -165990779 + MIR SINE MIR 57 245 -17 354 45 0 0 chr2 84697758 84697802 -165990052 + (TG)n Simple_repeat Simple_repeat 2 45 0 390 292 127 38 chr2 84697815 84698051 -165989803 + MLT1I LTR MaLR 1 257 -152 1445 165 7 29 chr2 84698941 84699213 -165988641 + MER54B LTR ERVL 517 782 -11 305 28 0 0 chr2 84699881 84699917 -165987937 - L1MA3 LINE L1 -92 6213 6178 529 328 61 30 chr2 84700503 84700930 -165986924 + L1M4 LINE L1 2145 2584 -3562 400 310 66 30 chr2 84701378 84701649 -165986205 - L1M4 LINE L1 -1800 4346 4066 1029 238 91 69 chr2 84701651 84702071 -165985783 + L1MC4 LINE L1 6568 6996 -1046 255 185 56 0 chr2 84702126 84702180 -165985674 + MSTA LTR MaLR 1 57 -371 1198 215 40 16 chr2 84702185 84702579 -165985275 - L1ME LINE L1 -599 5567 5165 991 230 5 14 chr2 84702584 84702801 -165985053 + AluJo SINE Alu 1 215 -97 293 216 167 10 chr2 84703358 84703460 -165984394 + MIR SINE MIR 128 245 -17 278 341 40 0 chr2 84704213 84704339 -165983515 - MIR SINE MIR -51 211 81 2212 99 6 10 chr2 84704544 84704857 -165982997 - AluSq SINE Alu 0 313 2 229 277 0 0 chr2 84705961 84706008 -165981846 + MLT1J2 LTR MaLR 115 161 -289 284 295 37 20 chr2 84706015 84706163 -165981691 + MLT1I LTR MaLR 296 407 -2 565 92 23 23 chr2 84706383 84706514 -165981340 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 1600 204 54 3 chr2 84706545 84706858 -165980996 - MER47B DNA MER2_type -1 417 89 1425 192 8 8 chr2 84706904 84707170 -165980684 + AluJb SINE Alu 17 282 -30 571 170 0 10 chr2 84707178 84707278 -165980576 - MER47B DNA MER2_type -319 99 1 220 143 24 60 chr2 84707278 84707362 -165980492 + (TA)n Simple_repeat Simple_repeat 2 82 0 201 292 0 56 chr2 84708504 84708576 -165979278 + MER5B DNA MER1_type 82 149 -29 338 294 89 6 chr2 84709162 84709342 -165978512 + L1ME3A LINE L1 5964 6158 -12 1318 281 70 5 chr2 84709846 84710220 -165977634 + LTR16A LTR ERVL 18 415 -35 23 33 0 0 chr2 84711019 84711049 -165976805 + AT_rich Low_complexity Low_complexity 1 30 0 357 368 152 34 chr2 84711260 84711871 -165975983 - L2 LINE L2 -2442 872 190 283 266 50 58 chr2 84712241 84712482 -165975372 - L1MEc LINE L1 -4120 2276 2038 347 346 145 34 chr2 84712644 84713167 -165974687 - L1MEc LINE L1 -4583 1813 1233 218 375 49 45 chr2 84713752 84714016 -165973838 + L2 LINE L2 2439 2703 -611 2530 106 6 0 chr2 84714531 84714891 -165972963 - L1MA3 LINE L1 -297 7427 7066 2676 122 19 2 chr2 84714892 84715310 -165972544 - MER57B LTR ERV1 0 434 10 2496 150 0 3 chr2 84715314 84715723 -165972131 - L1MA3 LINE L1 -656 7068 6663 214 266 144 70 chr2 84715808 84716037 -165971817 + L2 LINE L2 2283 2528 -786 8066 183 17 3 chr2 84716123 84716509 -165971345 + L1PA14 LINE L1 3578 3957 -2204 2374 83 0 0 chr2 84716509 84716809 -165971045 + AluY SINE Alu 1 300 -11 8066 183 17 3 chr2 84716809 84718017 -165969837 + L1PA14 LINE L1 3957 5156 -1005 198 0 0 0 chr2 84718017 84718039 -165969815 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 8066 183 17 3 chr2 84718039 84719057 -165968797 + L1PA14 LINE L1 5156 6159 -2 22 35 0 0 chr2 84719077 84719106 -165968748 + AT_rich Low_complexity Low_complexity 1 29 0 1681 177 0 17 chr2 84721136 84721435 -165966419 + AluJb SINE Alu 1 294 -18 470 17 17 0 chr2 84721435 84721494 -165966360 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 25 0 0 0 chr2 84721609 84721634 -165966220 + AT_rich Low_complexity Low_complexity 1 25 0 197 305 109 62 chr2 84722057 84722185 -165965669 + MIR SINE MIR 10 143 -119 471 50 25 25 chr2 84722291 84722371 -165965483 + (TTTC)n Simple_repeat Simple_repeat 3 82 0 324 375 70 15 chr2 84723090 84723349 -165964505 - L3 LINE CR1 -866 711 439 331 356 26 0 chr2 84724173 84724288 -165963566 + MIR SINE MIR 49 166 -96 253 284 91 23 chr2 84725082 84725170 -165962684 - MIR SINE MIR -157 105 12 2138 212 30 4 chr2 84726161 84726624 -165961230 - L1MB7 LINE L1 -21 6163 5689 4548 156 6 69 chr2 84726658 84727616 -165960238 - L1MC1 LINE L1 -11 6558 5661 3341 270 123 32 chr2 84727646 84728808 -165959046 - L1MC1 LINE L1 -912 5470 4415 1922 97 0 60 chr2 84728808 84729126 -165958728 - AluY SINE Alu 0 300 1 3341 270 123 32 chr2 84729126 84730085 -165957769 - L1MC1 LINE L1 -1967 4415 3155 5204 108 27 12 chr2 84730112 84730933 -165956921 - L1MA2 LINE L1 0 6304 5472 7201 189 10 11 chr2 84730945 84732449 -165955405 - L1MA3 LINE L1 -1099 6466 4964 * 10946 183 118 29 chr2 84732447 84734889 -165952965 - L1MA3 LINE L1 -4624 2941 14 2037 258 71 19 chr2 84734890 84735976 -165951878 - L1MC1 LINE L1 -3209 3173 2028 27 29 0 0 chr2 84736874 84736908 -165950946 + AT_rich Low_complexity Low_complexity 1 34 0 204 302 16 48 chr2 84737120 84737183 -165950671 + L2 LINE L2 3201 3261 -11 378 275 50 0 chr2 84737384 84737504 -165950350 - MLT1L LTR MaLR -19 596 471 403 296 70 27 chr2 84740331 84740517 -165947337 - L2 LINE L2 0 3313 3120 985 326 37 28 chr2 84740562 84740992 -165946862 - L2 LINE L2 -370 2944 2511 367 256 86 17 chr2 84741140 84741257 -165946597 + MIR SINE MIR 87 211 -51 24 0 0 0 chr2 84741476 84741500 -165946354 + AT_rich Low_complexity Low_complexity 1 24 0 5120 239 32 31 chr2 84741605 84743840 -165944014 + L1PBa LINE L1 37 1644 -5219 * 5287 160 19 59 chr2 84743838 84744322 -165943532 + L1PB3 LINE L1 4674 5176 -978 216 0 0 0 chr2 84744322 84744346 -165943508 + (TAA)n Simple_repeat Simple_repeat 2 25 0 5287 160 19 59 chr2 84744346 84745403 -165942451 + L1PB3 LINE L1 5176 6153 -1 4382 180 44 54 chr2 84745647 84746566 -165941288 - L1MA9 LINE L1 -14 6298 5372 2207 95 0 3 chr2 84746566 84746860 -165940994 + AluY SINE Alu 1 293 -18 450 75 0 0 chr2 84746860 84746927 -165940927 + (TA)n Simple_repeat Simple_repeat 1 67 0 4382 180 44 54 chr2 84746927 84747261 -165940593 - L1MA9 LINE L1 -938 5374 5052 2045 190 43 25 chr2 84747268 84747643 -165940211 - L1MA9 LINE L1 -1380 4766 4378 1250 174 75 0 chr2 84747643 84747925 -165939929 - L1MA4A LINE L1 -1 6302 6000 2045 190 43 25 chr2 84747925 84748034 -165939820 - L1MA9 LINE L1 -1768 4378 4273 10826 161 56 7 chr2 84748192 84750135 -165937719 + Tigger1 DNA MER2_type 1 2037 -381 473 94 0 82 chr2 84750194 84750279 -165937575 + Tigger1 DNA MER2_type 2242 2319 -99 518 189 0 11 chr2 84750318 84750408 -165937446 - Tigger1 DNA MER2_type -3 2415 2327 1113 283 97 27 chr2 84750499 84750732 -165937122 - L1M3a LINE L1 -5215 740 525 2595 83 14 3 chr2 84750732 84751082 -165936772 - THE1A LTR MaLR 0 355 2 11155 109 2 8 chr2 84751083 84752672 -165935182 - THE1A-int LTR MaLR 0 1580 1 2437 126 0 3 chr2 84752672 84753028 -165934826 - THE1A LTR MaLR 0 355 1 1113 283 97 27 chr2 84753028 84753307 -165934547 - L1M3a LINE L1 -5429 526 11 318 214 112 10 chr2 84753673 84753771 -165934083 + MLT1I LTR MaLR 274 381 -28 300 291 139 13 chr2 84754986 84755144 -165932710 - MIR SINE MIR -57 205 28 2372 73 0 3 chr2 84756055 84756357 -165931497 - AluY SINE Alu -10 301 1 499 288 94 12 chr2 84758504 84758674 -165929180 + LTR33 LTR ERVL 33 216 -305 186 189 0 0 chr2 84759175 84759212 -165928642 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 726 309 72 26 chr2 84759323 84759669 -165928185 - LTR33 LTR ERVL -150 371 10 1612 271 101 24 chr2 84760122 84760676 -165927178 - MER77 LTR ERV1 0 605 9 359 214 14 0 chr2 84761946 84762016 -165925838 + L2 LINE L2 3243 3313 0 848 238 11 11 chr2 84765289 84765478 -165922376 + MER5A DNA MER1_type 1 189 0 922 197 52 38 chr2 84765489 84765702 -165922152 - MER20 DNA MER1_type -3 216 1 299 277 94 25 chr2 84765737 84765863 -165921991 - MER5A DNA MER1_type -48 141 4 1917 79 60 11 chr2 84765900 84766200 -165921654 - AluY SINE Alu 0 313 1 27 29 0 0 chr2 84766208 84766242 -165921612 + AT_rich Low_complexity Low_complexity 1 34 0 329 295 162 0 chr2 84766292 84766397 -165921457 + MER5B DNA MER1_type 1 122 -56 268 220 28 187 chr2 84766403 84766585 -165921269 - MER5B DNA MER1_type -18 160 8 531 258 8 8 chr2 84766868 84766992 -165920862 + MER5B DNA MER1_type 55 178 0 213 178 0 0 chr2 84767352 84767397 -165920457 + (TATATG)n Simple_repeat Simple_repeat 1 45 0 338 67 0 0 chr2 84770293 84770338 -165917516 + MADE1 DNA Mariner 31 75 -5 230 396 21 0 chr2 84770509 84770605 -165917249 - MIR SINE MIR -77 131 34 495 320 103 15 chr2 84770665 84770868 -165916986 + L3 LINE CR1 1342 1562 -15 684 244 56 0 chr2 84771041 84771201 -165916653 + FRAM SINE Alu 1 169 -7 295 180 0 0 chr2 84771842 84771892 -165915962 + L2 LINE L2 2943 2992 -321 347 278 96 21 chr2 84771944 84772131 -165915723 + L2 LINE L2 3113 3313 0 385 253 167 23 chr2 84772432 84772606 -165915248 - L2 LINE L2 -2 3311 3113 298 358 119 7 chr2 84772819 84772970 -165914884 + MIR SINE MIR 75 242 -20 1937 147 19 0 chr2 84773035 84773342 -165914512 - AluSq SINE Alu 0 313 1 278 294 206 16 chr2 84773388 84773514 -165914340 - MIR SINE MIR -107 155 6 180 0 0 0 chr2 84773570 84773590 -165914264 + (TA)n Simple_repeat Simple_repeat 2 21 0 453 235 39 26 chr2 84773590 84773743 -165914111 - Charlie1 DNA MER1_type -55 2706 2552 1334 268 63 21 chr2 84773774 84774199 -165913655 - MLT1E LTR MaLR -16 577 135 210 71 0 0 chr2 84774402 84774430 -165913424 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 207 0 0 0 chr2 84774931 84774954 -165912900 + (TG)n Simple_repeat Simple_repeat 2 24 0 557 197 0 79 chr2 84774955 84775082 -165912772 - MER20 DNA MER1_type -94 125 9 2227 157 56 0 chr2 84775253 84775679 -165912175 - L1MA4 LINE L1 0 6300 5851 297 182 0 0 chr2 84775679 84775734 -165912120 + L1MA4 LINE L1 5814 5868 -432 180 152 0 0 chr2 84777626 84777659 -165910195 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 207 316 147 0 chr2 84778080 84778175 -165909679 + L2 LINE L2 2948 3056 -216 231 317 115 10 chr2 84778390 84778494 -165909360 - MIR3 SINE MIR -87 121 7 22 56 0 0 chr2 84779075 84779111 -165908743 + AT_rich Low_complexity Low_complexity 1 36 0 260 173 0 0 chr2 84779378 84779430 -165908424 - L1MC1 LINE L1 -1 6332 6281 5042 195 25 13 chr2 84779449 84780613 -165907241 - L1MC1 LINE L1 -102 6231 5051 227 237 0 0 chr2 84780639 84780698 -165907156 + L1ME3A LINE L1 6112 6170 0 227 146 0 21 chr2 84780906 84780954 -165906900 - LTR66 LTR ERVL -175 435 389 287 290 21 32 chr2 84781027 84781120 -165906734 - MIR SINE MIR -83 179 88 1817 249 92 6 chr2 84781146 84781649 -165906205 + MER90 LTR ERV1 69 614 0 482 359 62 22 chr2 84782547 84782820 -165905034 + MLT1G LTR MaLR 2 285 -305 317 293 74 60 chr2 84783495 84783719 -165904135 + MIR SINE MIR 24 249 -13 3604 170 42 14 chr2 84783953 84784697 -165903157 - LTR1B LTR ERV1 0 785 1 304 310 58 19 chr2 84784815 84784970 -165902884 + HAL1 LINE L1 1548 1708 -799 1749 192 12 0 chr2 84785702 84786040 -165901814 + MER2 DNA MER2_type 2 343 -1 2048 158 18 0 chr2 84786496 84786837 -165901017 + MER7A DNA MER2_type 1 345 -1 202 250 0 0 chr2 84786990 84787034 -165900820 + (TA)n Simple_repeat Simple_repeat 1 44 0 25 31 0 0 chr2 84787327 84787359 -165900495 + AT_rich Low_complexity Low_complexity 1 32 0 333 271 5 15 chr2 84787550 84787697 -165900157 - MLT1H LTR MaLR -267 162 30 252 0 0 0 chr2 84788487 84788515 -165899339 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 27 0 0 0 chr2 84788671 84788698 -165899156 + AT_rich Low_complexity Low_complexity 1 27 0 2155 45 0 90 chr2 84788731 84789041 -165898813 - AluY SINE Alu -29 282 1 365 324 105 51 chr2 84789619 84789934 -165897920 - L2 LINE L2 -118 3154 2823 355 244 64 26 chr2 84789985 84790141 -165897713 - Charlie7 DNA MER1_type -11 2601 2440 244 192 0 19 chr2 84790130 84790182 -165897672 - Charlie7 DNA MER1_type -2508 104 54 * 1102 143 0 0 chr2 84790410 84790578 -165897276 + AluSg/x SINE Alu 129 296 -16 183 42 0 0 chr2 84791065 84791089 -165896765 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 204 363 69 0 chr2 84791679 84791781 -165896073 - MIR SINE MIR -114 148 40 388 230 9 9 chr2 84793159 84793272 -165894582 - L1MB7 LINE L1 -1 6183 6071 226 57 0 0 chr2 84793380 84793415 -165894439 + L1PA4 LINE L1 6116 6150 -5 22 70 0 0 chr2 84793416 84793459 -165894395 + AT_rich Low_complexity Low_complexity 1 43 0 204 127 63 13 chr2 84794052 84794131 -165893723 + (TA)n Simple_repeat Simple_repeat 1 83 0 1184 194 41 106 chr2 84795183 84795570 -165892284 - MLT1A1 LTR MaLR -3 362 1 1141 266 19 25 chr2 84795682 84796005 -165891849 - MLT1A2 LTR MaLR 0 374 54 212 378 14 0 chr2 84796063 84796137 -165891717 + MIR SINE MIR 70 144 -64 2533 44 0 0 chr2 84796291 84796589 -165891265 - AluY SINE Alu -13 298 1 225 337 67 0 chr2 84797094 84797183 -165890671 + MIR SINE MIR 75 169 -93 327 130 0 0 chr2 84797260 84797314 -165890540 + (CAT)n Simple_repeat Simple_repeat 3 56 0 254 68 51 17 chr2 84798423 84798482 -165889372 + (TA)n Simple_repeat Simple_repeat 1 61 0 1048 126 13 0 chr2 84798872 84799031 -165888823 - L1PA16 LINE L1 -213 5953 5793 298 182 18 0 chr2 84799279 84799334 -165888520 - MER5A DNA MER1_type 0 189 134 30303 107 15 53 chr2 84799342 84801920 -165885934 + L1PA7 LINE L1 3 2676 -3478 2377 64 7 0 chr2 84801920 84802215 -165885639 - AluY SINE Alu -14 297 1 30303 107 15 53 chr2 84802215 84805434 -165882420 + L1PA7 LINE L1 2676 6153 -1 472 267 44 7 chr2 84805434 84805569 -165882285 - MER5A DNA MER1_type -49 140 1 600 120 126 51 chr2 84806138 84806313 -165881541 + MER53 DNA DNA 1 188 -1 286 260 27 0 chr2 84806419 84806492 -165881362 + MIR SINE MIR 78 152 -110 26 88 0 0 chr2 84809199 84809267 -165878587 + AT_rich Low_complexity Low_complexity 1 68 0 772 288 154 16 chr2 84809268 84809897 -165877957 - L1MEc LINE L1 -5105 1291 576 302 331 40 17 chr2 84809928 84810103 -165877751 - L1MEc LINE L1 -5908 488 310 260 327 61 0 chr2 84810417 84810582 -165877272 + L1M4 LINE L1 3791 3965 -2181 243 189 0 0 chr2 84811093 84811146 -165876708 - L1MB7 LINE L1 -20 6164 6112 2429 208 85 39 chr2 84811146 84811706 -165876148 - L1MB5 LINE L1 -155 6088 5477 1726 149 79 25 chr2 84811706 84812062 -165875792 + THE1C LTR MaLR 1 375 0 2429 208 85 39 chr2 84812062 84812185 -165875669 - L1MB5 LINE L1 -766 5477 5361 329 164 0 0 chr2 84812201 84812256 -165875598 + L1MC/D LINE L1 5700 5754 -605 22 0 0 0 chr2 84812262 84812284 -165875570 + AT_rich Low_complexity Low_complexity 1 22 0 4696 143 14 29 chr2 84812284 84813140 -165874714 - L1MA1 LINE L1 0 6302 5460 3603 248 68 32 chr2 84813226 84814654 -165873200 - L1MB5 LINE L1 -1551 4664 3186 956 259 42 16 chr2 84814759 84815137 -165872717 - L1MB5 LINE L1 -3699 2520 2172 1315 48 0 6 chr2 84815138 84815304 -165872550 - L1PA3 LINE L1 -3 6152 5988 2960 20 0 0 chr2 84815304 84815850 -165872004 + L1P1 LINE L1 5037 5582 -573 1932 100 0 0 chr2 84815848 84816129 -165871725 - L1P LINE L1 -1090 5056 4776 * 5869 96 0 6 chr2 84816129 84816957 -165870897 + L1PA8 LINE L1 5341 6165 -7 189 147 0 0 chr2 84817913 84817947 -165869907 + (TC)n Simple_repeat Simple_repeat 1 34 0 2389 88 10 0 chr2 84818180 84818487 -165869367 + AluY SINE Alu 2 311 0 2280 19 0 4 chr2 84870055 84870318 -165817536 + L1PA5 LINE L1 5616 5877 -277 10230 129 23 22 chr2 84870418 84872091 -165815763 - L1P LINE L1 -4461 1685 11 2272 112 0 0 chr2 84872207 84872501 -165815353 + AluSc SINE Alu 2 295 -14 192 97 0 0 chr2 84872515 84872546 -165815308 + (CA)n Simple_repeat Simple_repeat 2 32 0 537 326 32 9 chr2 84873629 84873850 -165814004 - LTR33 LTR ERVL -2 519 294 254 213 80 0 chr2 84874772 84874847 -165813007 - MIR3 SINE MIR -5 203 123 1572 181 10 33 chr2 84875425 84875728 -165812126 - AluJo SINE Alu -16 296 1 4983 152 13 39 chr2 84876074 84876620 -165811234 + L1PA15 LINE L1 4754 5313 -852 2284 55 0 0 chr2 84876620 84876908 -165810946 + L1PA8 LINE L1 5883 6172 0 4983 152 13 39 chr2 84876908 84877085 -165810769 + L1PA15 LINE L1 5313 5493 -672 1732 176 3 3 chr2 84877085 84877380 -165810474 - AluJb SINE Alu -17 295 1 4983 152 13 39 chr2 84877380 84877963 -165809891 + L1PA15 LINE L1 5493 6046 -119 1394 171 98 25 chr2 84877963 84878249 -165809605 - THE1C LTR MaLR -68 307 1 330 153 14 42 chr2 84878669 84878741 -165809113 + L1PA16 LINE L1 6097 6166 0 2201 113 0 0 chr2 84879247 84879540 -165808314 + AluSc SINE Alu 1 293 -16 4164 222 43 12 chr2 84879684 84880811 -165807043 - L1 LINE L1 -840 5306 4145 1896 231 45 149 chr2 84880811 84882031 -165805823 - MER52A LTR ERV1 0 1755 663 2640 207 49 5 chr2 84882038 84882671 -165805183 - L1 LINE L1 -2000 4146 3486 318 150 12 38 chr2 84882671 84882751 -165805103 - L1PA15 LINE L1 0 6165 6088 989 338 25 29 chr2 84884149 84884596 -165803258 + LTR16A LTR ERVL 1 445 -5 180 0 0 0 chr2 84885759 84885779 -165802075 + (T)n Simple_repeat Simple_repeat 1 20 0 28 29 0 0 chr2 84886305 84886340 -165801514 + AT_rich Low_complexity Low_complexity 1 35 0 229 118 39 0 chr2 84887024 84887075 -165800779 + (CA)n Simple_repeat Simple_repeat 2 54 0 183 167 0 0 chr2 84887065 84887107 -165800747 + (TA)n Simple_repeat Simple_repeat 1 42 0 * 274 266 145 36 chr2 84887505 84887809 -165800045 - L2 LINE L2 -564 2750 2414 23 68 0 0 chr2 84887905 84887949 -165799905 + AT_rich Low_complexity Low_complexity 1 44 0 241 385 13 23 chr2 84888200 84888338 -165799516 + MIR SINE MIR 45 186 -22 252 253 23 23 chr2 84888883 84888970 -165798884 - MLT1J LTR MaLR -19 492 406 233 299 65 13 chr2 84889779 84889856 -165797998 - MIR3 SINE MIR -43 165 85 27 29 0 0 chr2 84890006 84890040 -165797814 + AT_rich Low_complexity Low_complexity 1 34 0 28563 62 3 1 chr2 84891713 84896179 -165791675 - L1PA6 LINE L1 -3 6151 1678 2106 123 47 33 chr2 84896845 84897204 -165790650 - THE1B LTR MaLR 0 364 1 258 264 0 0 chr2 84897495 84897548 -165790306 + polypyrimidine Low_complexity Low_complexity 28 80 0 361 233 135 0 chr2 84898882 84899015 -165788839 - HAL1b LINE L1 -252 1096 946 277 282 91 0 chr2 84899031 84899141 -165788713 - L1MC3 LINE L1 -1086 6699 6580 1526 229 21 26 chr2 84899148 84899210 -165788644 - L1MC3 LINE L1 -1159 6626 6565 198 0 0 0 chr2 84899210 84899232 -165788622 + (TA)n Simple_repeat Simple_repeat 1 22 0 480 18 0 0 chr2 84899236 84899293 -165788561 + (CA)n Simple_repeat Simple_repeat 2 58 0 1526 229 21 26 chr2 84899293 84899644 -165788210 - L1MC3 LINE L1 -1223 6562 6210 1035 235 125 55 chr2 84900065 84900447 -165787407 + MSTD LTR MaLR 3 396 0 289 139 54 54 chr2 84901066 84901232 -165786622 + (TA)n Simple_repeat Simple_repeat 1 166 0 21 0 0 0 chr2 84901257 84901278 -165786576 + AT_rich Low_complexity Low_complexity 1 21 0 252 59 0 0 chr2 84901922 84901956 -165785898 + (TA)n Simple_repeat Simple_repeat 2 35 0 345 261 0 22 chr2 84901958 84902050 -165785804 + L1MC4 LINE L1 6614 6703 -1339 309 294 29 0 chr2 84901977 84902079 -165785775 - L1MC4 LINE L1 -1323 6719 6615 * 30 0 0 0 chr2 84903471 84903501 -165784353 + AT_rich Low_complexity Low_complexity 1 30 0 528 288 63 18 chr2 84903533 84903755 -165784099 - L2 LINE L2 0 3313 3082 306 312 80 51 chr2 84903958 84904195 -165783659 - MIR SINE MIR -7 255 12 1588 229 121 50 chr2 84904205 84904882 -165782972 + MER50 LTR ERV1 10 734 0 42 65 0 0 chr2 84904932 84905009 -165782845 + AT_rich Low_complexity Low_complexity 1 77 0 1595 263 142 2 chr2 84905021 84905458 -165782396 + MLT1D LTR MaLR 1 498 -7 1169 267 49 30 chr2 84905478 84905950 -165781904 + MLT1D-int LTR MaLR 16 496 -875 1069 214 88 0 chr2 84905968 84906263 -165781591 + MER46B DNA MER2_type 32 227 -9 466 186 0 150 chr2 84906270 84906437 -165781417 + MLT1D-int LTR MaLR 495 636 -735 22 0 0 0 chr2 84906799 84906821 -165781033 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 84907625 84907654 -165780200 + AT_rich Low_complexity Low_complexity 1 29 0 2100 179 33 16 chr2 84908168 84908593 -165779261 + Tigger2a DNA MER2_type 2 433 -1 25 0 0 0 chr2 84909075 84909100 -165778754 + AT_rich Low_complexity Low_complexity 1 25 0 4375 287 59 39 chr2 84909200 84911650 -165776204 + L1MEc LINE L1 38 2495 -3720 285 186 0 0 chr2 84911814 84911884 -165775970 + CT-rich Low_complexity Low_complexity 4 73 0 270 0 0 0 chr2 84911891 84911921 -165775933 + (TA)n Simple_repeat Simple_repeat 1 30 0 434 230 96 6 chr2 84912218 84912396 -165775458 + L1MEc LINE L1 2503 2696 -3519 1168 240 90 18 chr2 84912397 84913140 -165774714 + L1MEc LINE L1 2806 3638 -2577 528 289 62 9 chr2 84913843 84914054 -165773800 + MIR SINE MIR 41 262 0 2463 64 3 3 chr2 84914182 84914493 -165773361 + AluY SINE Alu 1 311 0 2129 116 3 0 chr2 84915079 84915360 -165772494 + AluSg1 SINE Alu 1 299 -10 199 0 0 0 chr2 84915360 84915382 -165772472 + (TAAAA)n Simple_repeat Simple_repeat 2 60 0 2129 116 3 0 chr2 84915382 84915394 -165772460 + AluSg1 SINE Alu 299 309 0 4375 161 10 3 chr2 84915416 84916122 -165771732 + MER50 LTR ERV1 1 711 -23 462 297 154 21 chr2 84916125 84916455 -165771399 + L1MEc LINE L1 237 610 -5953 226 235 72 52 chr2 84916711 84916864 -165770990 + L1MEc LINE L1 1035 1190 -5373 6263 137 11 4 chr2 84916930 84918416 -165769438 + HUERS-P3 LTR ERV1 5210 6755 -2164 1046 261 42 14 chr2 84918421 84918788 -165769066 + HUERS-P3 LTR ERV1 6655 7007 -411 1352 155 11 10 chr2 84918890 84919149 -165768705 + HUERS-P3 LTR ERV1 7158 8914 -5 303 203 16 0 chr2 84919154 84919218 -165768636 + LTR19C LTR ERV1 1 65 -714 803 206 110 44 chr2 84919249 84919521 -165768333 + LTR19C LTR ERV1 490 779 0 318 264 75 48 chr2 84919522 84919729 -165768125 + L1MEc LINE L1 1107 1321 -5063 182 374 82 0 chr2 84919803 84919950 -165767904 - L2 LINE L2 -1318 1996 1838 22 80 0 0 chr2 84919959 84920009 -165767845 + AT_rich Low_complexity Low_complexity 1 50 0 3113 176 58 26 chr2 84920087 84920791 -165767063 + LTR8A LTR ERV1 1 727 0 320 278 20 60 chr2 84920924 84920973 -165766881 - L1ME3A LINE L1 -223 5930 5881 354 23 0 0 chr2 84920973 84921016 -165766838 + (TG)n Simple_repeat Simple_repeat 2 44 0 1993 131 3 3 chr2 84921021 84921311 -165766543 - AluSx SINE Alu -22 290 1 320 278 20 60 chr2 84921311 84921406 -165766448 - L1ME3A LINE L1 -276 5877 5786 320 283 55 32 chr2 84921527 84921705 -165766149 - L1ME3A LINE L1 -536 5617 5445 2239 151 28 5 chr2 84921705 84922095 -165765759 - MER57A LTR ERV1 -3 400 2 320 283 55 32 chr2 84922095 84922282 -165765572 - L1ME3A LINE L1 -708 5445 5240 26 64 0 0 chr2 84922282 84922329 -165765525 + AT_rich Low_complexity Low_complexity 1 47 0 308 263 153 63 chr2 84922341 84922567 -165765287 - L1ME3A LINE L1 -935 5194 4933 2497 169 120 6 chr2 84922567 84923101 -165764753 - LTR49 LTR ERV1 0 595 1 308 263 153 63 chr2 84923101 84923175 -165764679 - L1ME3A LINE L1 -1196 4933 4867 381 331 133 17 chr2 84923278 84923683 -165764171 - L1ME3A LINE L1 -5547 572 121 189 147 0 0 chr2 84923701 84923735 -165764119 + (CAAAA)n Simple_repeat Simple_repeat 3 36 0 247 272 0 68 chr2 84924447 84924550 -165763304 + GA-rich Low_complexity Low_complexity 3 98 0 2912 160 81 89 chr2 84924971 84925723 -165762131 + LTR48 LTR ERV1 1 746 -41 3740 184 34 10 chr2 84925938 84926648 -165761206 + MER50 LTR ERV1 1 727 -7 2116 86 90 8 chr2 84926654 84927021 -165760833 - LTR7 LTR ERV1 0 450 1 3389 152 70 2 chr2 84927746 84928319 -165759535 + LTR9 LTR ERV1 1 612 0 2150 90 0 7 chr2 84928336 84928649 -165759205 + AluY SINE Alu 1 311 0 2010 119 6 13 chr2 84928693 84929005 -165758849 - AluSg SINE Alu 0 310 1 200 128 26 0 chr2 84929266 84929305 -165758549 + (TA)n Simple_repeat Simple_repeat 1 40 0 625 172 39 23 chr2 84929748 84929876 -165757978 - FLAM_C SINE Alu -13 130 1 210 91 0 0 chr2 84929895 84929928 -165757926 + (TTG)n Simple_repeat Simple_repeat 2 34 0 21 0 0 0 chr2 84930538 84930559 -165757295 + AT_rich Low_complexity Low_complexity 1 21 0 212 324 65 19 chr2 84930676 84930784 -165757070 - MIR SINE MIR 0 262 150 22 25 0 25 chr2 84931409 84931429 -165756425 + AT_rich Low_complexity Low_complexity 1 20 -19 2098 116 3 3 chr2 84931429 84931721 -165756133 + AluSx SINE Alu 1 292 -20 22 25 0 25 chr2 84931721 84931740 -165756114 + AT_rich Low_complexity Low_complexity 20 39 0 272 338 86 14 chr2 84931779 84931918 -165755936 - MIR SINE MIR -16 246 98 402 350 89 12 chr2 84932737 84932994 -165754860 - L2 LINE L2 -493 2821 2545 652 247 6 6 chr2 84935048 84935206 -165752648 - L1MC3 LINE L1 -933 6852 6695 1097 277 71 7 chr2 84935238 84935675 -165752179 - L1MC3 LINE L1 -1475 6310 5846 238 257 43 0 chr2 84935675 84935745 -165752109 + L1MC5 LINE L1 6759 6831 -1130 22 0 0 0 chr2 84935825 84935847 -165752007 + AT_rich Low_complexity Low_complexity 1 22 0 1546 171 16 48 chr2 84937074 84937383 -165750471 + AluJo SINE Alu 1 299 -13 1317 184 4 54 chr2 84937720 84937878 -165749976 - AluJo SINE Alu -21 291 151 2702 29 0 13 chr2 84937878 84938193 -165749661 - AluY SINE Alu 0 311 1 1317 184 4 54 chr2 84938193 84938311 -165749543 - AluJo SINE Alu -161 151 29 22 80 0 0 chr2 84938784 84938834 -165749020 + AT_rich Low_complexity Low_complexity 1 50 0 290 335 76 45 chr2 84938942 84939232 -165748622 + L1ME LINE L1 5360 5661 -460 23 54 0 0 chr2 84939375 84939412 -165748442 + AT_rich Low_complexity Low_complexity 1 37 0 190 255 92 41 chr2 84940439 84940537 -165747317 - MER5B DNA MER1_type -70 108 6 544 42 0 0 chr2 84940712 84940784 -165747070 + AluY SINE Alu 1 72 -239 1471 72 5 0 chr2 84940785 84940979 -165746875 + AluY SINE Alu 116 310 -1 2316 175 52 0 chr2 84942624 84943029 -165744825 - MSTB LTR MaLR 0 426 1 362 381 85 0 chr2 84944177 84944366 -165743488 - MIR SINE MIR -56 206 2 267 184 20 0 chr2 84945042 84945091 -165742763 - MLT1I LTR MaLR 0 409 360 272 231 17 17 chr2 84946201 84946318 -165741536 + (TA)n Simple_repeat Simple_repeat 1 117 0 1373 204 193 29 chr2 84946558 84947136 -165740718 + LTR48 LTR ERV1 2 787 0 499 270 57 16 chr2 84947365 84947613 -165740241 - L1MEc LINE L1 -5477 919 662 905 277 35 40 chr2 84948745 84949146 -165738708 - L1MEc LINE L1 -5955 441 43 385 346 69 29 chr2 84949171 84949547 -165738307 - HERVL LTR ERVL -3350 2304 1914 2155 134 19 45 chr2 84949577 84949951 -165737903 - THE1B LTR MaLR 0 364 1 575 259 75 10 chr2 84950169 84950370 -165737484 - MER20 DNA MER1_type -4 215 2 1700 343 78 23 chr2 84950559 84951651 -165736203 - HERVL LTR ERVL -3642 1354 203 870 330 38 20 chr2 84951849 84952246 -165735608 - LTR16A LTR ERVL -14 436 33 279 0 0 0 chr2 84952803 84952834 -165735020 + (CA)n Simple_repeat Simple_repeat 1 31 0 243 343 22 52 chr2 84954101 84954235 -165733619 + MIR3 SINE MIR 7 136 -72 1474 221 210 32 chr2 84954463 84954924 -165732930 - L1M3e LINE L1 -6481 549 7 420 285 93 0 chr2 84954931 84955082 -165732772 + MIR SINE MIR 86 250 -12 21 57 0 0 chr2 84955329 84955364 -165732490 + AT_rich Low_complexity Low_complexity 1 35 0 1439 177 74 18 chr2 84956146 84956429 -165731425 - AluJo SINE Alu -13 299 1 1770 259 108 45 chr2 84957476 84958033 -165729821 + MER77 LTR ERV1 14 605 0 216 0 0 0 chr2 84958189 84958213 -165729641 + (CTATT)n Simple_repeat Simple_repeat 5 28 0 423 118 0 0 chr2 84958221 84958297 -165729557 + (TCTCC)n Simple_repeat Simple_repeat 3 78 0 209 351 68 0 chr2 84958663 84958737 -165729117 - L2 LINE L2 -38 3275 3197 210 157 39 20 chr2 84959235 84959286 -165728568 + T-rich Low_complexity Low_complexity 3 54 0 205 250 0 0 chr2 84959409 84959449 -165728405 + (CA)n Simple_repeat Simple_repeat 2 41 0 304 280 11 21 chr2 84959719 84959812 -165728042 - L1MC4 LINE L1 -1337 6705 6614 22 35 0 0 chr2 84959930 84959959 -165727895 + AT_rich Low_complexity Low_complexity 1 29 0 212 295 115 43 chr2 84960050 84960189 -165727665 - MIR SINE MIR -94 168 20 23 68 0 0 chr2 84960384 84960428 -165727426 + AT_rich Low_complexity Low_complexity 1 44 0 459 347 70 4 chr2 84960592 84960834 -165727020 + MIR SINE MIR 5 262 0 1318 126 117 0 chr2 84963097 84963197 -165724657 - MER30 DNA MER1_type 0 230 143 369 0 0 0 chr2 84963197 84963238 -165724616 + (TG)n Simple_repeat Simple_repeat 2 42 0 1318 126 117 0 chr2 84963238 84963343 -165724511 - MER30 DNA MER1_type -87 143 1 28 0 0 0 chr2 84964582 84964610 -165723244 + AT_rich Low_complexity Low_complexity 1 28 0 884 234 13 9 chr2 84964889 84965120 -165722734 + L1M3 LINE L1 3842 4073 -2073 486 133 0 12 chr2 84965125 84965208 -165722646 - MLT2D LTR ERVL -332 82 1 22 0 0 0 chr2 84965387 84965409 -165722445 + AT_rich Low_complexity Low_complexity 1 22 0 542 179 56 153 chr2 84966023 84966219 -165721635 + MER5B DNA MER1_type 1 177 -1 668 240 73 10 chr2 84966364 84966556 -165721298 - MER3 DNA MER1_type 0 209 6 216 97 0 0 chr2 84967702 84967733 -165720121 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 297 203 0 51 chr2 84968127 84968206 -165719648 + L1M3 LINE L1 5358 5432 -748 2376 149 1 0 chr2 84968598 84969204 -165718650 + L1PA12 LINE L1 5019 5625 -538 1603 119 16 4 chr2 84969312 84969564 -165718290 + L1PA12 LINE L1 5912 6166 -2 1604 124 26 11 chr2 84969565 84969838 -165718016 + L1PB1 LINE L1 5874 6150 -1 241 307 216 0 chr2 84971238 84971326 -165716528 + MIR SINE MIR 33 139 -69 220 330 43 11 chr2 84971584 84971678 -165716176 - L2 LINE L2 0 3272 3176 276 390 53 19 chr2 84972085 84972349 -165715505 + L2 LINE L2 2812 3084 -188 198 0 0 0 chr2 84973178 84973200 -165714654 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 553 312 16 0 chr2 84975216 84975402 -165712452 + MER5A DNA MER1_type 1 189 0 1305 284 70 10 chr2 84975797 84976282 -165711572 + LTR40a LTR ERVL 3 516 -3 258 235 88 0 chr2 84976677 84976745 -165711109 + MLT1G1 LTR MaLR 6 79 -516 188 108 0 27 chr2 84977625 84977662 -165710192 + (TC)n Simple_repeat Simple_repeat 2 37 0 198 176 0 0 chr2 84978274 84978325 -165709529 + (TA)n Simple_repeat Simple_repeat 1 51 0 285 51 0 0 chr2 84978339 84978378 -165709476 + (TG)n Simple_repeat Simple_repeat 2 40 0 6652 143 43 11 chr2 84979035 84980224 -165707630 + Tigger3b DNA MER2_type 5 1231 0 1216 256 150 17 chr2 84981484 84981979 -165705875 + MLT1F1 LTR MaLR 1 565 -2 264 111 0 0 chr2 84982125 84982170 -165705684 + (TG)n Simple_repeat Simple_repeat 2 46 0 259 369 18 51 chr2 84982899 84983116 -165704738 + L3 LINE CR1 1136 1345 -232 215 364 51 8 chr2 84983116 84983234 -165704620 - L2 LINE L2 -4 3309 3187 1314 214 104 19 chr2 84983764 84984129 -165703725 - MSTD LTR MaLR 0 396 1 184 370 40 10 chr2 84984624 84984724 -165703130 + MIR SINE MIR 28 130 -132 188 279 47 0 chr2 84984745 84984788 -165703066 + L2 LINE L2 3211 3255 -17 183 268 0 0 chr2 84984754 84984795 -165703059 + MIR SINE MIR 218 258 -4 * 189 385 92 17 chr2 84985420 84985594 -165702260 - L3 LINE CR1 -56 1521 1335 1672 166 87 58 chr2 84986384 84986800 -165701054 - MSTA LTR MaLR 0 428 1 290 390 66 28 chr2 84987150 84987437 -165700417 + L2 LINE L2 301 598 -2716 289 323 103 0 chr2 84987458 84987613 -165700241 + L2 LINE L2 727 897 -2417 5988 152 56 36 chr2 84988830 84990035 -165697819 + MER109 Unknown Unknown 1203 2432 0 296 346 124 63 chr2 84990233 84990325 -165697529 + L2 LINE L2 2136 2221 -1093 1466 183 48 10 chr2 84990325 84990620 -165697234 - AluJo SINE Alu -6 306 1 296 346 124 63 chr2 84990620 84991255 -165696599 + L2 LINE L2 2221 2907 -407 5870 198 104 17 chr2 84991260 84992737 -165695117 - L1MC3 LINE L1 -21 7764 6160 213 167 0 0 chr2 84992742 84992796 -165695058 + (TA)n Simple_repeat Simple_repeat 2 55 0 314 275 163 38 chr2 84993743 84994056 -165693798 - L1ME4a LINE L1 -253 5868 5517 387 0 0 0 chr2 84994148 84994191 -165693663 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 342 0 0 0 chr2 84994919 84994957 -165692897 + (CA)n Simple_repeat Simple_repeat 2 39 0 255 79 0 0 chr2 84995197 84995235 -165692619 + (CA)n Simple_repeat Simple_repeat 1 38 0 1585 157 82 0 chr2 84995782 84996072 -165691782 + MLT2C2 LTR ERVL 2 315 -149 343 275 0 0 chr2 84996072 84996141 -165691713 + AluS SINE Alu 2 70 -233 966 183 0 0 chr2 84996178 84996342 -165691512 + FRAM SINE Alu 2 165 -1 380 264 11 0 chr2 84996347 84996434 -165691420 + MLT2C1 LTR ERVL 234 321 -76 814 161 31 43 chr2 84996437 84996599 -165691255 - L1M3 LINE L1 -575 5605 5446 411 303 91 28 chr2 84996771 84997025 -165690829 - L1MEd LINE L1 -5403 716 447 521 277 88 31 chr2 84997553 84998020 -165689834 - L1ME LINE L1 -413 5757 5263 2857 3 0 0 chr2 84998139 84998450 -165689404 + AluYa5 SINE Alu 1 311 0 268 353 7 20 chr2 84999135 84999288 -165688566 - L1ME LINE L1 -2499 3647 3497 21 0 0 0 chr2 84999295 84999316 -165688538 + AT_rich Low_complexity Low_complexity 1 21 0 315 0 0 0 chr2 84999379 84999414 -165688440 + (T)n Simple_repeat Simple_repeat 1 35 0 3462 230 62 23 chr2 84999414 84999486 -165688368 - L1 LINE L1 -2739 3407 3339 2041 150 48 20 chr2 84999486 84999840 -165688014 - THE1B LTR MaLR 0 364 1 3462 230 62 23 chr2 84999840 85000796 -165687058 - L1 LINE L1 -2807 3339 2339 1010 250 27 5 chr2 85000798 85001018 -165686836 + MLT1A1 LTR MaLR 2 226 -139 986 228 0 0 chr2 85001047 85001231 -165686623 + MLT1A1 LTR MaLR 182 365 0 729 224 38 29 chr2 85001231 85001441 -165686413 - L1 LINE L1 -3804 2342 2131 222 296 0 0 chr2 85001600 85001671 -165686183 + T-rich Low_complexity Low_complexity 1 71 0 465 281 8 8 chr2 85001908 85002029 -165685825 + MLT1F LTR MaLR 1 121 -421 363 335 64 14 chr2 85002492 85002773 -165685081 + L1MC4a LINE L1 5549 5843 -1965 988 195 69 16 chr2 85002812 85002892 -165684962 + L1MB2 LINE L1 5086 5160 -1020 1705 176 0 0 chr2 85002892 85003206 -165684648 + AluSx SINE Alu 1 314 0 988 195 69 16 chr2 85003206 85003476 -165684378 + L1MB2 LINE L1 5160 5447 -733 7821 66 11 1 chr2 85003488 85005252 -165682602 + L1PA7 LINE L1 4312 6151 -3 3191 183 29 41 chr2 85005285 85005969 -165681885 + L1MB2 LINE L1 5494 6169 -2 223 280 0 0 chr2 85007216 85007266 -165680588 - L2 LINE L2 -16 3297 3248 * 484 344 51 9 chr2 85007254 85007469 -165680385 + MIR SINE MIR 18 241 -21 2615 43 0 0 chr2 85007806 85008110 -165679744 + AluY SINE Alu 2 305 -6 1813 101 115 62 chr2 85009715 85010071 -165677783 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr2 85011000 85011021 -165676833 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 85011438 85011476 -165676378 + AT_rich Low_complexity Low_complexity 1 38 0 752 44 0 0 chr2 85012527 85012617 -165675237 - 5S rRNA rRNA -31 90 1 311 325 129 21 chr2 85014387 85014581 -165673273 + MIR SINE MIR 35 249 -13 1178 112 35 0 chr2 85015723 85015893 -165671961 - AluSq SINE Alu -10 303 128 243 61 0 0 chr2 85015893 85015926 -165671928 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2022 130 3 0 chr2 85015926 85016210 -165671644 - AluSx SINE Alu -27 285 1 202 393 36 36 chr2 85016211 85016407 -165671447 + L2 LINE L2 2609 2804 -510 343 330 0 17 chr2 85016576 85016691 -165671163 + L2 LINE L2 3199 3311 -2 540 270 56 96 chr2 85017167 85017489 -165670365 - L2 LINE L2 0 3313 3005 481 286 32 91 chr2 85017515 85017854 -165670000 - MLT1I LTR MaLR -24 385 67 1641 215 106 32 chr2 85017859 85018329 -165669525 - MLT1D LTR MaLR 0 505 1 452 291 122 40 chr2 85018384 85018635 -165669219 - L2 LINE L2 -333 2980 2712 324 262 43 50 chr2 85019245 85019386 -165668468 - MIR SINE MIR -113 149 10 26 50 0 0 chr2 85019467 85019507 -165668347 + AT_rich Low_complexity Low_complexity 1 40 0 192 97 0 0 chr2 85020243 85020274 -165667580 + (TG)n Simple_repeat Simple_repeat 2 32 0 541 209 61 14 chr2 85022312 85022460 -165665394 - MER65C LTR ERV1 0 461 307 740 304 123 40 chr2 85022608 85023257 -165664597 + L1M4 LINE L1 2222 2983 -3163 2033 157 34 14 chr2 85023257 85023614 -165664240 - THE1B LTR MaLR 0 364 1 740 304 123 40 chr2 85023614 85023954 -165663900 + L1M4 LINE L1 2983 3293 -2853 277 310 17 30 chr2 85024122 85024298 -165663556 + L1M4 LINE L1 3510 3683 -2463 1562 233 16 81 chr2 85024298 85024852 -165663002 - MLT2B1 LTR ERVL -2 518 1 277 310 17 30 chr2 85024852 85024897 -165662957 + L1M4 LINE L1 3683 3727 -2419 1993 135 0 7 chr2 85024902 85025198 -165662656 + AluSx SINE Alu 2 295 -17 312 27 0 0 chr2 85025211 85025248 -165662606 + (CA)n Simple_repeat Simple_repeat 2 38 0 195 129 0 0 chr2 85025300 85025331 -165662523 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 317 281 107 61 chr2 85025346 85025656 -165662198 + L1M4 LINE L1 3868 4191 -1955 490 314 129 55 chr2 85025762 85026678 -165661176 + L1M4 LINE L1 4406 5392 -754 25 51 0 0 chr2 85026708 85026747 -165661107 + AT_rich Low_complexity Low_complexity 1 39 0 26 30 0 0 chr2 85027070 85027103 -165660751 + AT_rich Low_complexity Low_complexity 1 33 0 360 394 113 17 chr2 85027289 85027824 -165660030 + L2 LINE L2 2496 3081 -191 2033 98 0 0 chr2 85028107 85028363 -165659491 + AluSc SINE Alu 38 293 -16 203 208 69 0 chr2 85028421 85028522 -165659332 + GA-rich Low_complexity Low_complexity 4 111 0 223 294 153 18 chr2 85028628 85028791 -165659063 - L2 LINE L2 -8 3305 3121 326 275 21 70 chr2 85029334 85029476 -165658378 + L1ME LINE L1 820 954 -5116 687 201 109 23 chr2 85029962 85030136 -165657718 - MER5A DNA MER1_type 0 189 1 323 293 0 50 chr2 85031291 85031390 -165656464 - MIR SINE MIR -168 94 1 2526 252 123 67 chr2 85031745 85032422 -165655432 + L1MC4 LINE L1 6337 6975 -1067 2076 138 0 0 chr2 85032422 85032720 -165655134 + AluSx SINE Alu 3 300 -12 2526 252 123 67 chr2 85032720 85033314 -165654540 + L1MC4 LINE L1 6975 7679 -363 2919 188 70 84 chr2 85033359 85034226 -165653628 + L1MA9 LINE L1 5420 6274 -38 27 29 0 0 chr2 85034226 85034260 -165653594 + AT_rich Low_complexity Low_complexity 1 34 0 311 262 24 0 chr2 85034303 85034387 -165653467 + L1MD3 LINE L1 7872 7957 -38 512 293 28 64 chr2 85036141 85036424 -165651430 - L2 LINE L2 -577 2737 2465 1511 192 18 11 chr2 85036780 85037061 -165650793 - AluSx SINE Alu -29 283 1 204 312 93 54 chr2 85037793 85037998 -165649856 - L2 LINE L2 -8 3305 3093 290 292 34 0 chr2 85040045 85040134 -165647720 + MIR SINE MIR 28 119 -143 640 192 11 17 chr2 85040696 85040873 -165646981 + CT-rich Low_complexity Low_complexity 1 176 0 184 368 105 11 chr2 85041240 85041335 -165646519 + L2 LINE L2 3165 3268 -4 261 179 0 18 chr2 85041369 85041425 -165646429 - MIR SINE MIR -135 73 19 433 297 7 25 chr2 85042477 85042612 -165645242 - MIR SINE MIR -69 139 7 2709 7 0 0 chr2 85042779 85043076 -165644778 + AluY SINE Alu 1 297 -14 574 226 58 69 chr2 85043517 85043575 -165644279 + MLT1F LTR MaLR 1 58 -503 2168 106 7 3 chr2 85043575 85043878 -165643976 - AluSq SINE Alu -9 304 1 574 226 58 69 chr2 85043878 85044019 -165643835 + MLT1F LTR MaLR 58 196 -365 246 32 0 0 chr2 85044059 85044090 -165643764 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 872 232 151 47 chr2 85044132 85044451 -165643403 + MLT1F LTR MaLR 191 542 0 348 259 15 59 chr2 85044565 85044586 -165643268 + MLT1J LTR MaLR 69 89 -422 1455 219 19 19 chr2 85044586 85044951 -165642903 + MLT1A1 LTR MaLR 1 365 0 348 259 15 59 chr2 85044951 85045064 -165642790 + MLT1J LTR MaLR 89 197 -314 189 0 0 0 chr2 85045854 85045875 -165641979 + (T)n Simple_repeat Simple_repeat 1 21 0 207 0 0 0 chr2 85046788 85046811 -165641043 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 638 309 91 24 chr2 85048578 85048876 -165638978 - L2 LINE L2 -2 3311 2994 496 361 32 4 chr2 85048891 85049140 -165638714 - MIR SINE MIR 0 262 7 514 347 135 25 chr2 85049147 85049622 -165638232 - L2 LINE L2 -337 2977 2451 235 185 19 0 chr2 85049739 85049793 -165638061 + HsTC2 DNA Tc2 2 56 -1842 2067 110 3 0 chr2 85049830 85050120 -165637734 + AluSq SINE Alu 1 291 -22 282 179 0 0 chr2 85050988 85051044 -165636810 + (TA)n Simple_repeat Simple_repeat 2 57 0 245 273 23 0 chr2 85051044 85051132 -165636722 + L1MC4 LINE L1 6614 6703 -1339 213 216 0 0 chr2 85051132 85051169 -165636685 + (TATG)n Simple_repeat Simple_repeat 1 37 0 253 296 23 0 chr2 85051170 85051258 -165636596 + L1MC4 LINE L1 6614 6703 -1339 * 254 256 22 22 chr2 85051182 85051272 -165636582 - L1MC4 LINE L1 -1339 6703 6614 2147 101 3 0 chr2 85051569 85051866 -165635988 - AluSq SINE Alu -15 298 1 228 184 0 0 chr2 85051944 85051993 -165635861 + (TA)n Simple_repeat Simple_repeat 1 49 0 755 105 0 0 chr2 85053044 85053149 -165634705 - AluSx SINE Alu -14 296 192 1097 92 0 0 chr2 85053150 85053291 -165634563 - AluSx SINE Alu -171 141 1 22 35 0 0 chr2 85054955 85054984 -165632870 + AT_rich Low_complexity Low_complexity 1 29 0 294 176 0 0 chr2 85055219 85055270 -165632584 + AluSc SINE Alu 246 296 -3 274 293 186 50 chr2 85055453 85055666 -165632188 - HAL1 LINE L1 -343 2164 1981 1797 136 23 46 chr2 85055666 85056011 -165631843 - MER1B DNA MER1_type 0 337 1 274 293 186 50 chr2 85056011 85056281 -165631573 - HAL1 LINE L1 -526 1981 1615 317 304 83 46 chr2 85056394 85056982 -165630872 - HAL1 LINE L1 -1063 1444 835 290 217 29 29 chr2 85057219 85057288 -165630566 - L2 LINE L2 -37 3276 3208 275 239 14 134 chr2 85057562 85057704 -165630150 - MIR SINE MIR 0 262 138 260 250 120 0 chr2 85058846 85058938 -165628916 - L1MCa LINE L1 -2325 4101 3999 302 303 0 0 chr2 85059216 85059315 -165628539 - L1MCa LINE L1 -2701 3725 3627 591 280 122 36 chr2 85059350 85059818 -165628036 - L1MCa LINE L1 -2896 3530 3023 345 299 36 45 chr2 85059988 85060212 -165627642 - L1MCa LINE L1 -3622 2804 2583 524 327 22 26 chr2 85060405 85060631 -165627223 + MIR SINE MIR 37 261 -1 1429 196 33 11 chr2 85060874 85061149 -165626705 + AluJo SINE Alu 21 301 -11 21 36 0 0 chr2 85061307 85061335 -165626519 + AT_rich Low_complexity Low_complexity 1 28 0 5332 180 56 3 chr2 85062030 85063119 -165624735 + L1 LINE L1 3490 4636 -1510 4608 50 3 11 chr2 85063229 85064173 -165623681 - L1P2 LINE L1 -429 5725 4788 899 106 0 8 chr2 85064173 85064296 -165623558 - AluSq/x SINE Alu -191 122 1 647 295 133 35 chr2 85064995 85065037 -165622817 + HAL1 LINE L1 699 735 -1772 195 69 0 0 chr2 85065037 85065066 -165622788 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 647 295 133 35 chr2 85065066 85065856 -165621998 + HAL1 LINE L1 735 1613 -894 183 117 83 0 chr2 85065866 85065926 -165621928 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 315 306 75 0 chr2 85066113 85066260 -165621594 + HAL1 LINE L1 2063 2220 -287 331 322 75 40 chr2 85066314 85066513 -165621341 + HAL1 LINE L1 2302 2507 0 5576 215 47 29 chr2 85067394 85069268 -165618586 - L1M3 LINE L1 -743 5403 3515 320 102 20 0 chr2 85069258 85069307 -165618547 - L1MCa LINE L1 -4210 2216 2167 * 2354 179 83 28 chr2 85069311 85069531 -165618323 - L1MCa LINE L1 -4774 1652 1445 185 0 40 0 chr2 85069531 85069556 -165618298 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 2354 179 83 28 chr2 85069556 85069939 -165617915 - L1MCa LINE L1 -4981 1445 1016 452 186 49 20 chr2 85069943 85070045 -165617809 - FLAM_C SINE Alu -16 127 23 405 211 57 24 chr2 85070045 85070168 -165617686 - L1M3 LINE L1 -2880 3266 3140 2022 150 44 13 chr2 85070168 85070699 -165617155 + L1PA15-16 LINE L1 2436 3043 -3819 1614 120 38 4 chr2 85070699 85070965 -165616889 - L1PB1 LINE L1 -133 6018 5744 1723 164 156 13 chr2 85071402 85071775 -165616079 + MSTA LTR MaLR 1 426 -2 293 366 56 28 chr2 85072011 85072224 -165615630 + L2 LINE L2 3053 3271 -1 271 297 110 7 chr2 85073604 85073738 -165614116 + MER5A DNA MER1_type 8 166 -23 190 195 73 0 chr2 85073786 85073827 -165614027 + MIR3 SINE MIR 156 199 -9 2807 10 0 0 chr2 85075608 85075913 -165611941 + AluYa5 SINE Alu 1 305 -6 3489 22 0 0 chr2 85075913 85076327 -165611527 - L1PA16 LINE L1 -1520 4626 4213 * 5038 234 25 7 chr2 85076320 85077251 -165610603 + L1PA16 LINE L1 4614 5573 -593 2112 100 131 39 chr2 85077251 85077304 -165610550 + MSTA LTR MaLR 4 51 -377 2715 16 3 3 chr2 85077304 85077611 -165610243 + AluYb8 SINE Alu 1 307 -11 2112 100 131 39 chr2 85077611 85077946 -165609908 + MSTA LTR MaLR 51 428 0 2531 210 19 9 chr2 85077946 85078518 -165609336 + L1MB1 LINE L1 5567 6144 -24 5038 234 25 7 chr2 85077946 85078306 -165609548 + L1PA16 LINE L1 5573 5925 -241 243 283 125 7 chr2 85078518 85078670 -165609184 + L1ME3A LINE L1 5298 5467 -703 926 235 177 71 chr2 85078753 85079273 -165608581 - MLT1E2 LTR MaLR 0 626 52 285 297 48 28 chr2 85079358 85079503 -165608351 + L1ME3A LINE L1 5793 5940 -222 1176 233 7 31 chr2 85079518 85079810 -165608044 + AluJo SINE Alu 4 288 -14 6084 60 0 3 chr2 85079979 85080742 -165607112 - L1PA6 LINE L1 0 6154 5394 183 42 0 0 chr2 85080856 85080880 -165606974 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1646 169 7 25 chr2 85080886 85081170 -165606684 - AluJo SINE Alu -32 280 2 252 297 27 0 chr2 85081173 85081284 -165606570 + L1ME3A LINE L1 6042 6155 -15 374 250 75 33 chr2 85081344 85081464 -165606390 - L2 LINE L2 0 3313 3189 21 0 0 0 chr2 85082510 85082531 -165605323 + AT_rich Low_complexity Low_complexity 1 21 0 221 414 0 10 chr2 85083725 85083829 -165604025 + L2 LINE L2 2896 2998 -274 288 265 154 25 chr2 85084685 85084847 -165603007 + MIR SINE MIR 80 262 0 641 150 0 0 chr2 85085096 85085196 -165602658 + FRAM SINE Alu 71 170 -6 409 324 30 11 chr2 85085267 85085434 -165602420 - MIR SINE MIR -65 143 17 184 378 42 17 chr2 85086646 85086765 -165601089 - L2 LINE L2 0 3272 3151 285 111 22 0 chr2 85086893 85086938 -165600916 + MER91B DNA MER1_type 18 63 -127 377 319 154 18 chr2 85086958 85087237 -165600617 - L2 LINE L2 -534 2780 2464 207 328 0 15 chr2 85087901 85087968 -165599886 + MIR SINE MIR 197 262 0 237 308 42 42 chr2 85088392 85088535 -165599319 - MIR SINE MIR -74 188 46 202 280 144 24 chr2 85088509 85088634 -165599220 + MIR3 SINE MIR 41 180 -28 * 3537 48 7 0 chr2 85089692 85090131 -165597723 + L1PA5 LINE L1 5711 6152 -2 1161 147 5 5 chr2 85090135 85090326 -165597528 + AluSg/x SINE Alu 120 310 -2 367 270 44 69 chr2 85092236 85092395 -165595459 + MIR3 SINE MIR 38 192 -16 1072 149 171 50 chr2 85093306 85093410 -165594444 - Tigger1 DNA MER2_type 0 2418 2328 1852 104 30 20 chr2 85093410 85093708 -165594146 + AluSx SINE Alu 1 301 -11 1072 149 171 50 chr2 85093708 85093829 -165594025 - Tigger1 DNA MER2_type -90 2328 2223 234 0 0 0 chr2 85093829 85093855 -165593999 + (TG)n Simple_repeat Simple_repeat 1 26 0 1072 149 171 50 chr2 85093855 85093909 -165593945 - Tigger1 DNA MER2_type -195 2223 2104 * 6089 162 60 27 chr2 85093901 85095115 -165592739 - Tigger1 DNA MER2_type -1161 1257 4 214 315 70 4 chr2 85095584 85095736 -165592118 + MIR SINE MIR 34 254 -8 200 59 29 0 chr2 85095884 85095918 -165591936 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2109 123 17 0 chr2 85096233 85096533 -165591321 + AluSx SINE Alu 1 305 -7 216 196 52 21 chr2 85096792 85096889 -165590965 + (TA)n Simple_repeat Simple_repeat 1 100 0 482 214 94 6 chr2 85096943 85097102 -165590752 + MER58 DNA MER1_type 65 237 -104 4526 184 42 17 chr2 85097446 85098545 -165589309 + L1MA4 LINE L1 5169 6293 -7 2554 55 0 3 chr2 85099485 85099792 -165588062 + AluY SINE Alu 3 308 -3 1352 272 78 41 chr2 85101861 85102397 -165585457 - MER68 LTR ERV1 -6 556 1 1177 158 59 1 chr2 85102593 85102871 -165584983 - Tigger3(Golem) DNA MER2_type -1 3028 40 204 329 65 52 chr2 85103547 85103702 -165584152 - L2 LINE L2 -221 3092 2936 15117 182 59 10 chr2 85104604 85107630 -165580224 + L1M1 LINE L1 16 3675 -3890 2097 155 52 6 chr2 85107643 85107991 -165579863 + THE1B LTR MaLR 1 364 0 1979 89 4 0 chr2 85107991 85108261 -165579593 + THE1B-int LTR MaLR 1 271 -1309 * 2998 99 2 13 chr2 85108250 85108706 -165579148 - L1P LINE L1 -1018 5128 4678 11156 87 29 1 chr2 85108713 85111084 -165576770 + L1PA7 LINE L1 3744 6140 -14 3947 225 44 2 chr2 85111084 85112091 -165575763 + L1M1 LINE L1 3807 4855 -2710 364 298 10 26 chr2 85112290 85112451 -165575403 - MIR3 SINE MIR -8 200 41 246 267 38 38 chr2 85113215 85113320 -165574534 - MLT1I LTR MaLR 0 409 305 360 293 54 66 chr2 85113407 85113560 -165574294 - MLT1I LTR MaLR -263 146 7 318 318 0 11 chr2 85114399 85114487 -165573367 - MIR SINE MIR -80 128 42 23 33 0 0 chr2 85114896 85114926 -165572928 + AT_rich Low_complexity Low_complexity 1 30 0 412 308 145 37 chr2 85115720 85116045 -165571809 + MLT1I LTR MaLR 48 407 -2 401 293 50 55 chr2 85116542 85116723 -165571131 + MIR SINE MIR 18 197 -65 285 98 0 0 chr2 85117544 85117585 -165570269 + (TA)n Simple_repeat Simple_repeat 1 41 0 2291 105 0 3 chr2 85118573 85118879 -165568975 + AluSg SINE Alu 3 307 -3 592 274 70 105 chr2 85119152 85119627 -165568227 + L1MCa LINE L1 1290 1744 -4796 232 299 123 16 chr2 85119683 85119870 -165567984 + L1MCa LINE L1 1923 2129 -4592 219 220 0 0 chr2 85119880 85119930 -165567924 + (TA)n Simple_repeat Simple_repeat 2 51 0 689 189 75 0 chr2 85120195 85120354 -165567500 - MER3 DNA MER1_type -81 128 5 21 0 0 0 chr2 85120410 85120431 -165567423 + AT_rich Low_complexity Low_complexity 1 21 0 3874 198 63 93 chr2 85120446 85121657 -165566197 + L1MC1 LINE L1 29 1202 -5224 1232 151 5 5 chr2 85121663 85121868 -165565986 - MSTA LTR MaLR -223 205 1 4397 236 68 36 chr2 85121902 85123829 -165564025 + L1MC1 LINE L1 3792 5779 -745 * 9415 36 1 2 chr2 85123826 85124977 -165562877 - L1PA4 LINE L1 -874 5272 4123 7211 32 3 3 chr2 85124977 85125847 -165562007 + L1PA4 LINE L1 5275 6154 -1 189 0 0 0 chr2 85125852 85125873 -165561981 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 3960 190 42 7 chr2 85125908 85126720 -165561134 + L1MC1 LINE L1 5765 6604 -9 428 301 61 39 chr2 85126788 85127624 -165560230 + L1MCa LINE L1 2523 3324 -3216 2259 196 3 83 chr2 85127634 85127821 -165560033 + L1 LINE L1 2439 2639 -3507 1652 142 103 8 chr2 85127821 85128082 -165559772 + AluSq SINE Alu 3 288 -25 2259 196 3 83 chr2 85128082 85128093 -165559761 + L1 LINE L1 2639 2649 -3497 1920 145 0 10 chr2 85128093 85128382 -165559472 + AluSq SINE Alu 1 286 -27 2259 196 3 83 chr2 85128382 85128407 -165559447 + L1 LINE L1 2649 2674 -3472 186 43 0 0 chr2 85128407 85128430 -165559424 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2259 196 3 83 chr2 85128430 85128792 -165559062 + L1 LINE L1 2674 2979 -3167 316 193 147 4 chr2 85128793 85128806 -165559048 - L1P5 LINE L1 -345 5806 5796 210 43 0 64 chr2 85128806 85128853 -165559001 + (TA)n Simple_repeat Simple_repeat 1 44 0 316 193 147 4 chr2 85128853 85128952 -165558902 - L1P5 LINE L1 -355 5796 5681 440 289 153 13 chr2 85129373 85129601 -165558253 + MER69 DNA AcHobo 12 271 -2255 * 1453 238 101 22 chr2 85129598 85130200 -165557654 + MER69 DNA AcHobo 1859 2508 -18 326 291 0 50 chr2 85131125 85131266 -165556588 + A-rich Low_complexity Low_complexity 5 138 0 207 340 43 35 chr2 85132101 85132242 -165555612 + L2 LINE L2 728 869 -2445 4242 162 103 20 chr2 85132316 85133319 -165554535 + MER52C LTR ERV1 1 1278 0 197 277 92 46 chr2 85133579 85133709 -165554145 + MIR SINE MIR 81 216 -46 451 328 34 11 chr2 85134852 85135027 -165552827 + MIR SINE MIR 32 210 -52 2529 55 0 10 chr2 85135516 85135825 -165552029 - AluY SINE Alu -5 306 1 25 0 0 0 chr2 85135972 85135997 -165551857 + AT_rich Low_complexity Low_complexity 1 25 0 1390 190 41 10 chr2 85136008 85136303 -165551551 + Tigger6 DNA MER2_type 1 304 -1293 1443 230 88 2 chr2 85136313 85136469 -165551385 + Tigger6 DNA MER2_type 1155 1296 -301 2367 94 0 0 chr2 85136469 85136767 -165551087 - AluSc SINE Alu -10 299 2 1443 230 88 2 chr2 85136767 85137018 -165550836 + Tigger6 DNA MER2_type 1296 1597 0 21 57 0 0 chr2 85137667 85137702 -165550152 + AT_rich Low_complexity Low_complexity 1 35 0 1722 258 85 117 chr2 85138333 85139317 -165548537 - MER45C DNA AcHobo 0 953 1 235 338 90 55 chr2 85139899 85140044 -165547810 + L2 LINE L2 3123 3272 0 23 0 0 0 chr2 85140967 85140990 -165546864 + AT_rich Low_complexity Low_complexity 1 23 0 294 325 92 0 chr2 85141039 85141159 -165546695 - MIR SINE MIR -23 239 109 509 278 47 0 chr2 85141963 85142132 -165545722 - MER5B DNA MER1_type -1 177 1 432 274 60 18 chr2 85142658 85142826 -165545028 - MER5B DNA MER1_type 0 178 4 294 29 0 0 chr2 85143374 85143409 -165544445 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 85143589 85143610 -165544244 + AT_rich Low_complexity Low_complexity 1 21 0 695 267 52 44 chr2 85144683 85144934 -165542920 - MIR SINE MIR 0 262 10 1237 240 39 39 chr2 85145890 85146331 -165541523 + MLT1D LTR MaLR 1 441 -64 419 271 43 7 chr2 85146881 85147021 -165540833 + LTR33A LTR ERVL 370 514 -9 236 354 31 0 chr2 85147317 85147413 -165540441 + MIR SINE MIR 66 164 -98 21 0 0 0 chr2 85150184 85150205 -165537649 + AT_rich Low_complexity Low_complexity 1 21 0 304 298 73 0 chr2 85150268 85150392 -165537462 - MER94 DNA DNA 0 134 2 1994 147 7 10 chr2 85151102 85151408 -165536446 - AluSx SINE Alu -7 305 1 540 332 54 8 chr2 85151452 85151671 -165536183 + MIR SINE MIR 16 236 -26 21 0 0 0 chr2 85154254 85154275 -165533579 + AT_rich Low_complexity Low_complexity 1 21 0 198 296 89 45 chr2 85155509 85155688 -165532166 + L2 LINE L2 2376 2562 -752 897 226 85 34 chr2 85155923 85156319 -165531535 - MLT2D LTR ERVL 0 464 1 185 83 28 0 chr2 85156901 85156937 -165530917 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 7792 18 3 0 chr2 85156937 85157955 -165529899 - L1HS LINE L1 -16 6139 5116 5954 155 37 2 chr2 85158058 85159629 -165528225 + L1MA2 LINE L1 4680 6304 0 679 161 21 140 chr2 85161367 85161560 -165526294 + MER101B LTR ERV1 59 228 -342 234 241 36 48 chr2 85161698 85161781 -165526073 + MER101 LTR ERV1 358 439 -35 3895 138 30 45 chr2 85163117 85163790 -165524064 - MER4D LTR ERV1 -3 831 196 1839 146 3 7 chr2 85163790 85164123 -165523731 - AluSq SINE Alu 0 332 1 3895 138 30 45 chr2 85164123 85164195 -165523659 - MER4D LTR ERV1 -638 196 124 1602 203 149 59 chr2 85164218 85164809 -165523045 - LTR48B LTR ERV1 0 644 1 1007 211 5 0 chr2 85165097 85165282 -165522572 - LTR8 LTR ERV1 0 691 506 780 217 6 13 chr2 85165333 85165511 -165522343 - LTR8 LTR ERV1 -367 360 171 1650 155 158 19 chr2 85165522 85165930 -165521924 - LTR10A LTR ERV1 0 609 94 18238 235 18 19 chr2 85165963 85173316 -165514538 - HERVI LTR ERV1 -1 7784 501 766 218 45 107 chr2 85173389 85173697 -165514157 - HERVI LTR ERV1 -6360 289 1 1639 189 94 81 chr2 85173706 85174247 -165513607 - LTR10A LTR ERV1 -61 548 1 687 132 35 132 chr2 85174264 85174438 -165513416 - LTR8A LTR ERV1 -567 160 4 1696 197 65 37 chr2 85174943 85175428 -165512426 + LTR60 LTR ERV1 3 539 -47 240 203 135 61 chr2 85175404 85175552 -165512302 + MER51D LTR ERV1 470 628 -29 * 387 0 0 0 chr2 85175596 85175639 -165512215 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 272 194 61 92 chr2 85175707 85175805 -165512049 - MER34C LTR ERV1 -2 583 489 232 216 20 0 chr2 85176156 85176207 -165511647 - MER34 LTR ERV1 -467 75 24 1035 228 107 80 chr2 85176341 85176789 -165511065 - MER31B LTR ERV1 0 466 7 21 0 0 0 chr2 85179033 85179054 -165508800 + AT_rich Low_complexity Low_complexity 1 21 0 305 315 27 0 chr2 85179849 85179922 -165507932 - L3 LINE CR1 -124 1453 1379 402 318 104 20 chr2 85179964 85180165 -165507689 - L3 LINE CR1 -183 1394 1177 281 206 48 0 chr2 85180514 85180577 -165507277 - MIR SINE MIR -75 187 122 2041 125 7 0 chr2 85180600 85180895 -165506959 + AluSg SINE Alu 1 297 -13 825 293 92 0 chr2 85181042 85181359 -165506495 + L1MB7 LINE L1 5830 6175 -9 228 237 79 0 chr2 85181453 85181529 -165506325 - HsTC2 DNA Tc2 -16 1882 1801 375 250 171 26 chr2 85181596 85181748 -165506106 - HsTC2 DNA Tc2 -1724 174 1 401 360 79 18 chr2 85182616 85182844 -165505010 + MIR SINE MIR 3 244 -18 232 261 15 0 chr2 85182846 85182911 -165504943 + (CAT)n Simple_repeat Simple_repeat 3 68 0 378 0 0 0 chr2 85184711 85184753 -165503101 + (TG)n Simple_repeat Simple_repeat 1 42 0 212 322 115 0 chr2 85185268 85185355 -165502499 + MIR SINE MIR 108 204 -58 246 328 149 26 chr2 85186031 85186226 -165501628 - MIR SINE MIR -21 241 23 26 30 0 0 chr2 85190752 85190785 -165497069 + AT_rich Low_complexity Low_complexity 1 33 0 181 245 0 20 chr2 85191626 85191675 -165496179 + L3b LINE CR1 1536 1583 0 213 175 0 0 chr2 85191873 85191913 -165495941 + (TA)n Simple_repeat Simple_repeat 2 41 0 331 238 90 16 chr2 85192044 85192233 -165495621 + MER20B DNA MER1_type 581 783 0 215 398 9 19 chr2 85192254 85192362 -165495492 - MIR SINE MIR -70 138 32 225 154 0 0 chr2 85193003 85193042 -165494812 + (TA)n Simple_repeat Simple_repeat 2 40 0 1783 191 45 36 chr2 85193561 85194379 -165493475 - L1MD1 LINE L1 0 6242 5277 270 196 71 0 chr2 85194379 85194435 -165493419 - MLT1A2 LTR MaLR 0 374 315 493 205 32 12 chr2 85194487 85194726 -165493128 - L1MD1 LINE L1 -3218 2928 2645 798 255 212 64 chr2 85194740 85195159 -165492695 + MER77 LTR ERV1 1 481 -124 893 164 107 0 chr2 85195588 85195765 -165492089 - L1MB1 LINE L1 -1 6167 5972 3188 199 56 48 chr2 85195769 85196955 -165490899 + L1M3 LINE L1 4539 5739 -429 379 226 52 17 chr2 85196966 85197081 -165490773 + MER77 LTR ERV1 485 603 -2 824 219 68 55 chr2 85197081 85197479 -165490375 - L1MD1 LINE L1 -3520 2626 2224 651 247 114 78 chr2 85197479 85197695 -165490159 - MLT1D LTR MaLR 0 505 273 2614 27 0 0 chr2 85197695 85197990 -165489864 - AluY SINE Alu -16 295 1 651 247 114 78 chr2 85197990 85198081 -165489773 - MLT1D LTR MaLR -232 273 187 473 261 17 0 chr2 85198438 85198553 -165489301 - MER63A DNA MER1_type -36 174 58 626 188 0 9 chr2 85199061 85199173 -165488681 - FLAM_A SINE Alu -20 122 12 1603 188 0 41 chr2 85199316 85199630 -165488224 - AluJb SINE Alu -1 311 11 1958 170 3 30 chr2 85201428 85201798 -165486056 - MER46B DNA MER2_type -1 235 1 1964 151 44 3 chr2 85203025 85203363 -165484491 + LTR45B LTR ERV1 5 356 -133 1911 106 87 0 chr2 85205366 85205641 -165482213 + AluSc SINE Alu 1 299 -10 188 65 0 32 chr2 85207658 85207689 -165480165 + (TA)n Simple_repeat Simple_repeat 2 31 0 2472 253 48 3 chr2 85207820 85208444 -165479410 + MER82 DNA MER2_type 2 653 0 211 276 142 24 chr2 85210425 85210552 -165477302 - MIR SINE MIR -17 245 104 28 48 0 0 chr2 85210798 85210840 -165477014 + AT_rich Low_complexity Low_complexity 1 42 0 2004 65 68 0 chr2 85210870 85211181 -165476673 + AluY SINE Alu 1 329 0 3157 226 14 1 chr2 85211491 85212182 -165475672 - L1P LINE L1 -3905 2241 1542 2469 131 47 9 chr2 85212184 85212700 -165475154 + L1P4 LINE L1 5111 5639 -524 3397 170 20 5 chr2 85212751 85213398 -165474456 + L1PA13 LINE L1 4534 5190 -956 * 4019 120 49 0 chr2 85213374 85213991 -165473863 + L1PA13 LINE L1 5509 6155 -8 346 273 126 16 chr2 85214117 85214300 -165473554 + L1ME3A LINE L1 3029 3231 -2915 330 320 108 15 chr2 85214458 85214848 -165473006 + L1ME3A LINE L1 3514 3939 -2207 246 255 10 10 chr2 85215022 85215120 -165472734 + L1MC4 LINE L1 7121 7218 -824 938 233 20 5 chr2 85215243 85215445 -165472409 - MER2 DNA MER2_type -140 205 1 2091 251 63 14 chr2 85215445 85216091 -165471763 + L1MC4 LINE L1 7218 7895 -147 287 364 0 0 chr2 85216192 85216326 -165471528 + L1ME3A LINE L1 5450 5580 -586 2242 95 10 0 chr2 85216330 85216636 -165471218 + AluY SINE Alu 1 309 -2 715 266 139 43 chr2 85216691 85217253 -165470601 + MLT1E2 LTR MaLR 1 626 0 205 205 0 0 chr2 85217323 85217362 -165470492 + (TA)n Simple_repeat Simple_repeat 1 39 0 456 254 81 0 chr2 85217435 85217608 -165470246 + L1ME3A LINE L1 5782 5968 -202 934 150 0 0 chr2 85218962 85219095 -165468759 + FRAM SINE Alu 20 152 -24 711 231 6 0 chr2 85220462 85220644 -165467210 + MER53 DNA DNA 4 186 -3 1457 189 57 16 chr2 85222144 85222514 -165465340 - MER58D DNA MER1_type 0 386 2 315 0 0 0 chr2 85223261 85223296 -165464558 + (A)n Simple_repeat Simple_repeat 1 35 0 333 100 0 0 chr2 85224790 85224840 -165463014 + (A)n Simple_repeat Simple_repeat 1 50 0 242 192 82 41 chr2 85225756 85225829 -165462025 - MER20B DNA MER1_type -655 128 53 2044 83 11 11 chr2 85227357 85227633 -165460221 + THE1C LTR MaLR 1 276 -99 250 96 58 19 chr2 85227633 85227685 -165460169 - MLT2A1 LTR ERVL 0 453 400 225 0 0 0 chr2 85227700 85227725 -165460129 + (TA)n Simple_repeat Simple_repeat 2 26 0 2638 106 46 5 chr2 85227725 85228113 -165459741 - MLT2A1 LTR ERVL -40 404 1 20171 81 9 13 chr2 85228113 85230792 -165457062 - HERVL-A1 LTR ERVL 0 5654 2986 246 163 0 20 chr2 85231036 85231085 -165456769 + L2 LINE L2 3266 3313 0 1294 109 0 31 chr2 85231540 85231733 -165456121 + AluSp SINE Alu 115 301 -12 315 259 267 0 chr2 85232840 85232956 -165454898 + MIR SINE MIR 65 211 -51 533 251 91 10 chr2 85233243 85233442 -165454412 - MER96B DNA MER1_type? -202 215 1 264 345 53 23 chr2 85233780 85233951 -165453903 - MIR SINE MIR 0 262 87 435 331 43 20 chr2 85235373 85235627 -165452227 + MIR SINE MIR 2 261 -1 327 297 22 43 chr2 85239463 85239601 -165448253 + MIR SINE MIR 109 243 -19 428 244 122 20 chr2 85239643 85239840 -165448014 - MER113 DNA MER1_type? -221 300 84 260 315 140 34 chr2 85240122 85240300 -165447554 + MIR SINE MIR 28 224 -38 2475 52 7 19 chr2 85240544 85240851 -165447003 - AluY SINE Alu -5 306 4 7165 52 16 3 chr2 85242193 85243704 -165444150 + L1PA6 LINE L1 4437 5960 -194 475 307 132 9 chr2 85244126 85244354 -165443500 + L3 LINE CR1 1216 1471 -106 1675 93 0 0 chr2 85244579 85244795 -165443059 + AluSg/x SINE Alu 81 296 -14 25 31 0 0 chr2 85244870 85244902 -165442952 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr2 85245727 85245748 -165442106 + (A)n Simple_repeat Simple_repeat 1 21 0 399 310 148 20 chr2 85247357 85247578 -165440276 - MIR SINE MIR -1 261 20 210 387 91 5 chr2 85248681 85248867 -165438987 + MIR SINE MIR 60 261 -1 559 240 33 82 chr2 85249696 85249879 -165437975 + MER5A DNA MER1_type 1 174 -15 189 190 165 51 chr2 85250585 85250664 -165437190 - L3 LINE CR1 -1108 469 382 229 377 0 9 chr2 85251008 85251114 -165436740 + L2 LINE L2 3168 3272 0 872 235 50 15 chr2 85251331 85251531 -165436323 - MER58A DNA MER1_type -17 207 1 420 303 124 32 chr2 85251648 85251866 -165435988 + MIR SINE MIR 7 244 -18 230 315 46 46 chr2 85255889 85255997 -165431857 + MIR SINE MIR 20 127 -135 252 244 61 43 chr2 85256365 85256480 -165431374 - MLT1I LTR MaLR 0 409 293 1669 195 30 46 chr2 85256501 85256685 -165431169 + MLT1B LTR MaLR 1 186 -204 2500 50 0 0 chr2 85256685 85256982 -165430872 + AluY SINE Alu 1 297 -14 1669 195 30 46 chr2 85256982 85257191 -165430663 + MLT1B LTR MaLR 186 388 -2 262 111 0 0 chr2 85258056 85258092 -165429762 + tRNA-Asp-GAC tRNA tRNA 1 36 -39 349 325 44 5 chr2 85258151 85258354 -165429500 + L1ME LINE L1 5564 5774 -347 1071 41 0 0 chr2 85258423 85258545 -165429309 + AluY SINE Alu 1 122 -189 3962 246 77 32 chr2 85258667 85259100 -165428754 + L1MB7 LINE L1 2849 3261 -2885 2438 97 0 0 chr2 85259100 85259410 -165428444 + AluSg SINE Alu 1 310 0 3962 246 77 32 chr2 85259410 85259475 -165428379 + L1MB7 LINE L1 3261 3322 -2824 1208 204 0 63 chr2 85259475 85259730 -165428124 - MER8 DNA MER2_type 0 239 1 3962 246 77 32 chr2 85259730 85260843 -165427011 + L1MB7 LINE L1 3322 4534 -1612 10680 229 26 22 chr2 85260873 85265209 -165422645 - L1PA16 LINE L1 -5 6864 2500 3639 204 86 16 chr2 85265216 85266506 -165421348 + L1MB7 LINE L1 4567 5980 -204 2143 113 0 0 chr2 85266506 85266831 -165421023 + AluSx SINE Alu 1 325 0 3639 204 86 16 chr2 85266831 85267007 -165420847 + L1MB7 LINE L1 5980 6142 -42 773 167 0 16 chr2 85267707 85267833 -165420021 + FLAM_C SINE Alu 3 126 -17 5523 171 62 5 chr2 85269008 85270647 -165417207 + L1PB1 LINE L1 1 1876 -4987 2292 130 8 3 chr2 85270648 85271001 -165416853 - THE1A LTR MaLR 0 355 1 9875 115 4 3 chr2 85271002 85271184 -165416670 - THE1A-int LTR MaLR -1 1579 1399 1805 97 4 0 chr2 85271184 85271422 -165416432 + AluY SINE Alu 1 239 -72 9875 115 4 3 chr2 85271422 85272827 -165415027 - THE1A-int LTR MaLR -181 1399 1 2495 107 3 0 chr2 85272827 85273181 -165414673 - THE1A LTR MaLR 0 355 1 13576 201 24 7 chr2 85273181 85278036 -165409818 + L1PB1 LINE L1 1874 6867 0 310 286 60 30 chr2 85278364 85278635 -165409219 + MLT1I LTR MaLR 75 409 0 7071 40 7 2 chr2 85279091 85280403 -165407451 - L1PA4 LINE L1 -8 6147 4822 289 220 128 37 chr2 85280405 85280514 -165407340 + MER5C DNA MER1_type 1 119 -205 187 274 82 0 chr2 85280587 85280660 -165407194 + MER5C DNA MER1_type 230 308 -16 268 181 84 12 chr2 85281004 85281087 -165406767 - L1MC/D LINE L1 -2008 5800 5712 1379 65 16 0 chr2 85281812 85281998 -165405856 + L1PB1 LINE L1 5962 6150 -1 3850 126 52 77 chr2 85282359 85283164 -165404690 + LTR1 LTR ERV1 1 785 0 474 326 61 33 chr2 85286016 85286261 -165401593 + MIR SINE MIR 11 262 0 1225 126 0 6 chr2 85287250 85287432 -165400422 - AluSg SINE Alu -11 301 121 1138 215 117 16 chr2 85287447 85287815 -165400039 - L1MC/D LINE L1 -1286 4860 4456 921 116 0 0 chr2 85287834 85287955 -165399899 - AluSg SINE Alu -179 131 11 6896 238 115 25 chr2 85287955 85289166 -165398688 - L1MC2 LINE L1 -35 6727 5626 288 53 0 0 chr2 85289166 85289204 -165398650 + (CA)n Simple_repeat Simple_repeat 1 38 0 6896 238 115 25 chr2 85289204 85291426 -165396428 - L1MC2 LINE L1 -1136 5626 3605 733 197 0 0 chr2 85291426 85291548 -165396306 + FLAM_A SINE Alu 3 124 -9 6896 238 115 25 chr2 85291548 85293764 -165394090 - L1MC2 LINE L1 -3157 3605 500 1383 256 63 53 chr2 85293751 85294371 -165393483 - L1MCa LINE L1 -5781 645 20 * 1321 270 137 23 chr2 85294411 85294737 -165393117 + L1MDa LINE L1 1836 2123 -4417 234 0 0 0 chr2 85294737 85294763 -165393091 + (TA)n Simple_repeat Simple_repeat 1 26 0 1321 270 137 23 chr2 85294763 85295341 -165392513 + L1MDa LINE L1 2123 2858 -3682 1207 274 132 8 chr2 85295363 85296103 -165391751 + L1MDa LINE L1 2989 3820 -2720 366 246 64 0 chr2 85296109 85296219 -165391635 + L1MDa LINE L1 3873 3989 -2551 304 282 48 10 chr2 85296247 85296350 -165391504 - L1MC4 LINE L1 -1341 6701 6595 7835 204 44 42 chr2 85296517 85296706 -165391148 - L1 LINE L1 -1908 5657 5470 2239 73 0 7 chr2 85296706 85297006 -165390848 + AluY SINE Alu 1 298 -13 7835 204 44 42 chr2 85297006 85299144 -165388710 - L1 LINE L1 -2095 5470 3316 26 0 0 0 chr2 85299160 85299186 -165388668 + AT_rich Low_complexity Low_complexity 1 26 0 1730 242 125 52 chr2 85299193 85300298 -165387556 - L1 LINE L1 -4371 3194 2098 654 341 56 20 chr2 85300681 85301071 -165386783 - L1 LINE L1 -5806 1690 1287 207 357 24 75 chr2 85301181 85301394 -165386460 - L3 LINE CR1 -82 1495 1294 225 338 0 12 chr2 85301419 85301499 -165386355 + MIR SINE MIR 48 126 -136 29 47 0 0 chr2 85302145 85302188 -165385666 + AT_rich Low_complexity Low_complexity 1 43 0 739 301 40 54 chr2 85302952 85303380 -165384474 - MER90 LTR ERV1 -125 450 29 21 89 0 0 chr2 85304614 85304670 -165383184 + AT_rich Low_complexity Low_complexity 1 56 0 407 181 28 0 chr2 85305535 85305607 -165382247 + MER39 LTR ERV1 1 74 -633 1129 162 20 34 chr2 85305608 85305812 -165382042 + AluJo SINE Alu 1 201 -111 2441 170 26 5 chr2 85305812 85306230 -165381624 + MER39 LTR ERV1 270 696 -11 21 71 0 0 chr2 85306741 85306783 -165381071 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 85306908 85306936 -165380918 + AT_rich Low_complexity Low_complexity 1 28 0 234 235 284 0 chr2 85308150 85308231 -165379623 - MIR SINE MIR -10 252 149 1136 260 61 65 chr2 85308244 85308832 -165379022 - L1ME1 LINE L1 -9 6157 5596 195 361 0 0 chr2 85308864 85308925 -165378929 - MIR SINE MIR -187 75 15 1728 93 15 19 chr2 85310149 85310408 -165377446 - L1PA10 LINE L1 -10 6158 5901 218 321 0 25 chr2 85311332 85311413 -165376441 - MIR SINE MIR -18 244 166 24 67 0 0 chr2 85311413 85311458 -165376396 + AT_rich Low_complexity Low_complexity 1 45 0 275 136 0 23 chr2 85311467 85311511 -165376343 + MLT1A2 LTR MaLR 5 47 -327 2080 154 14 19 chr2 85311513 85311877 -165375977 + THE1B LTR MaLR 1 362 -2 10880 113 10 6 chr2 85311877 85313429 -165374425 + THE1B-int LTR MaLR 14 1571 -9 2175 140 26 14 chr2 85313429 85313778 -165374076 + THE1B LTR MaLR 12 364 0 808 228 66 115 chr2 85313779 85314126 -165373728 + MLT1A2 LTR MaLR 45 374 0 230 297 25 68 chr2 85314140 85314258 -165373596 - MIR SINE MIR -131 131 19 512 246 0 0 chr2 85314632 85314746 -165373108 - FLAM_C SINE Alu -29 114 1 3978 220 92 32 chr2 85314927 85315381 -165372473 + L1M4c LINE L1 1096 1521 -4861 199 71 48 0 chr2 85315381 85315423 -165372431 + A-rich Low_complexity Low_complexity 2 45 0 3978 220 92 32 chr2 85315423 85316632 -165371222 + L1M4c LINE L1 1521 4008 -2374 22 35 0 0 chr2 85316669 85316698 -165371156 + AT_rich Low_complexity Low_complexity 1 29 0 311 307 108 33 chr2 85316709 85316921 -165370933 - L1M4 LINE L1 -3240 2906 2679 241 362 102 24 chr2 85317144 85317271 -165370583 - MIR SINE MIR -100 162 26 218 382 22 61 chr2 85319356 85319584 -165368270 - L2 LINE L2 -225 3047 2829 642 176 29 0 chr2 85319703 85319839 -165368015 - L1MB2 LINE L1 -7 6164 6025 7512 218 68 43 chr2 85319860 85323546 -165364308 - L1MA7 LINE L1 -9 6282 2468 4101 179 66 5 chr2 85323581 85325063 -165362791 - L1PA11 LINE L1 -83 6091 4531 329 205 14 0 chr2 85325079 85325167 -165362687 + L1PA11 LINE L1 4415 4510 -1636 3980 169 87 59 chr2 85325896 85326937 -165360917 - MER11C LTR ERVK 0 1071 1 2427 102 3 28 chr2 85327215 85327579 -165360275 + THE1A LTR MaLR 1 355 0 22 0 0 0 chr2 85328081 85328103 -165359751 + AT_rich Low_complexity Low_complexity 1 22 0 288 222 78 11 chr2 85328377 85328467 -165359387 + MER96B DNA MER1_type? 314 409 -8 335 273 195 39 chr2 85328791 85328869 -165358985 - MER5A DNA MER1_type -1 188 123 2036 181 101 0 chr2 85328869 85329256 -165358598 + MSTB LTR MaLR 1 426 0 335 273 195 39 chr2 85329256 85329331 -165358523 - MER5A DNA MER1_type -66 123 11 393 118 132 0 chr2 85329616 85329684 -165358170 + L1PA10 LINE L1 6082 6158 -10 191 250 33 17 chr2 85330086 85330146 -165357708 - L2 LINE L2 -11 3302 3242 1717 229 69 5 chr2 85330653 85331073 -165356781 - MLT1D LTR MaLR -58 447 1 596 341 39 12 chr2 85331188 85331443 -165356411 - MLT1I LTR MaLR -140 269 8 247 228 44 32 chr2 85332075 85332233 -165355621 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 23 0 0 0 chr2 85332407 85332430 -165355424 + AT_rich Low_complexity Low_complexity 1 23 0 830 186 29 35 chr2 85333422 85333594 -165354260 - MER20 DNA MER1_type -48 171 1 436 305 155 10 chr2 85334472 85334672 -165353182 - MIR SINE MIR -16 246 18 1802 138 170 16 chr2 85335319 85335690 -165352164 - MSTA LTR MaLR 0 428 1 2209 124 0 3 chr2 85337240 85337554 -165350300 + AluSq SINE Alu 1 313 0 370 115 54 8 chr2 85337932 85338062 -165349792 + (TA)n Simple_repeat Simple_repeat 2 137 0 2116 136 0 10 chr2 85338176 85338484 -165349370 + AluSg SINE Alu 5 309 -1 1120 253 66 29 chr2 85338631 85338979 -165348875 - MLT1F LTR MaLR -181 361 1 971 184 14 154 chr2 85339157 85339580 -165348274 + MLT1A1 LTR MaLR 1 364 -1 2447 71 0 0 chr2 85339777 85340072 -165347782 - AluY SINE Alu -16 295 1 1359 232 7 0 chr2 85340098 85340378 -165347476 - AluJo SINE Alu -30 282 1 219 262 0 83 chr2 85340409 85340493 -165347361 + L2 LINE L2 3233 3309 -4 21 0 0 0 chr2 85341904 85341925 -165345929 + AT_rich Low_complexity Low_complexity 1 21 0 204 200 0 0 chr2 85342974 85343019 -165344835 + CT-rich Low_complexity Low_complexity 4 48 0 2430 143 43 10 chr2 85343954 85344368 -165343486 + MSTA LTR MaLR 1 428 0 316 292 42 17 chr2 85344368 85344488 -165343366 + MIR SINE MIR 65 187 -75 4331 262 51 14 chr2 85344739 85345839 -165342015 + L1 LINE L1 578 1717 -4936 2936 114 12 0 chr2 85345841 85346261 -165341593 - MER57B LTR ERV1 -9 425 1 1085 211 65 20 chr2 85346261 85346617 -165341237 + L1 LINE L1 1712 2083 -4570 941 268 163 36 chr2 85346640 85347482 -165340372 + L1MA7 LINE L1 2688 3636 -3929 2163 113 0 0 chr2 85347509 85347809 -165340045 + AluY SINE Alu 1 300 -11 2356 77 3 10 chr2 85347811 85348121 -165339733 + AluSp SINE Alu 1 308 -5 6419 210 72 90 chr2 85348137 85348991 -165338863 + L1MA7 LINE L1 3644 4512 -3198 1101 239 17 4 chr2 85348991 85349221 -165338633 + MER8 DNA MER2_type 7 239 0 6419 210 72 90 chr2 85349221 85349680 -165338174 + L1MA7 LINE L1 4512 4978 -2732 1619 188 7 23 chr2 85349680 85349989 -165337865 - AluJb SINE Alu -8 304 1 6419 210 72 90 chr2 85349989 85351416 -165336438 + L1MA7 LINE L1 4978 6517 -1193 2454 50 7 0 chr2 85351416 85351715 -165336139 - AluY SINE Alu -4 307 7 6419 210 72 90 chr2 85351715 85352705 -165335149 + L1MA7 LINE L1 6517 7523 -187 1682 225 95 6 chr2 85352705 85353210 -165334644 + Tigger7 DNA MER2_type 1 2486 -1 646 171 196 0 chr2 85353211 85353369 -165334485 + L1MA6 LINE L1 6112 6300 0 385 290 99 0 chr2 85353478 85353609 -165334245 + L1 LINE L1 3674 3817 -2915 10633 155 9 16 chr2 85353676 85356387 -165331467 - L1PA11 LINE L1 -1 6173 3478 207 0 0 0 chr2 85356394 85356417 -165331437 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2164 116 0 0 chr2 85356419 85356711 -165331143 + AluSg SINE Alu 1 292 -18 496 159 80 26 chr2 85356726 85356877 -165330977 + L1ME3A LINE L1 5160 5318 -828 * 3232 216 60 13 chr2 85356862 85357702 -165330152 + L1 LINE L1 3852 4730 -2002 36307 44 6 1 chr2 85357903 85363176 -165324678 + L1PA4 LINE L1 856 6153 -2 740 228 124 0 chr2 85363174 85363427 -165324427 + L1ME3A LINE L1 5649 5939 -227 * 676 200 19 32 chr2 85363540 85363695 -165324159 + MER2 DNA MER2_type 56 208 -137 2066 162 36 21 chr2 85364024 85364412 -165323442 + MER57A LTR ERV1 1 394 -9 1695 213 68 68 chr2 85364464 85365099 -165322755 + MER92B LTR ERV1 2 636 0 347 301 114 38 chr2 85365570 85365782 -165322072 - MIR SINE MIR -7 255 30 208 352 11 0 chr2 85365895 85365983 -165321871 + MIR SINE MIR 172 260 -2 234 351 60 15 chr2 85365986 85366120 -165321734 - MIR SINE MIR -122 140 1 336 233 6 129 chr2 85366959 85367122 -165320732 + L2 LINE L2 3171 3313 0 1856 199 19 61 chr2 85367691 85368118 -165319736 + L1M4c LINE L1 3 411 -5973 2014 168 58 32 chr2 85368138 85368420 -165319434 + L1MB3 LINE L1 5708 6008 -175 1374 168 138 63 chr2 85368420 85368572 -165319282 - MSTA LTR MaLR 0 428 289 1872 138 44 14 chr2 85368572 85368869 -165318985 + AluSx SINE Alu 7 312 0 1374 168 138 63 chr2 85368869 85369114 -165318740 - MSTA LTR MaLR -139 289 1 2014 168 58 32 chr2 85369114 85369295 -165318559 + L1MB3 LINE L1 6008 6183 0 22 0 0 0 chr2 85369332 85369354 -165318500 + AT_rich Low_complexity Low_complexity 1 22 0 292 308 127 58 chr2 85370482 85370622 -165317232 - L2 LINE L2 -1553 1761 1632 1578 221 84 40 chr2 85370622 85371120 -165316734 - MLT2B1 LTR ERVL 0 520 1 292 308 127 58 chr2 85371120 85371271 -165316583 - L2 LINE L2 -1682 1632 1450 357 213 121 28 chr2 85371321 85371462 -165316392 + L1MC5 LINE L1 7632 7785 -176 326 266 185 60 chr2 85371588 85371923 -165315931 + MLT1F LTR MaLR 30 406 -136 187 337 99 10 chr2 85372369 85372470 -165315384 + MIR SINE MIR 57 166 -96 644 291 103 46 chr2 85373303 85373812 -165314042 - L1MCa LINE L1 -4922 1685 958 300 283 76 0 chr2 85374022 85374114 -165313740 - L1MCa LINE L1 -5930 486 388 361 328 15 8 chr2 85375028 85375159 -165312695 + MLT1G1 LTR MaLR 1 132 -463 2167 111 0 7 chr2 85375578 85375876 -165311978 + AluSx SINE Alu 3 298 -14 197 242 152 15 chr2 85375942 85376008 -165311846 - MIR3 SINE MIR -15 193 119 759 216 153 95 chr2 85376090 85376469 -165311385 + MER57A LTR ERV1 1 401 -2 640 301 58 32 chr2 85376651 85377007 -165310847 + MLT1F1 LTR MaLR 47 420 -122 188 278 148 9 chr2 85378028 85378143 -165309711 - MIR SINE MIR -6 256 126 206 368 13 0 chr2 85378257 85378333 -165309521 + L3 LINE CR1 1153 1229 -348 538 246 121 20 chr2 85379248 85379447 -165308407 + MER20 DNA MER1_type 1 219 0 236 183 0 33 chr2 85380267 85380327 -165307527 + (CATA)n Simple_repeat Simple_repeat 2 59 0 1315 138 58 13 chr2 85380327 85380552 -165307302 - Tigger5 DNA MER2_type -3 2320 2086 234 228 70 0 chr2 85380574 85380631 -165307223 - Tigger5 DNA MER2_type -2261 62 2 289 261 0 0 chr2 85380888 85380953 -165306901 + MER117 DNA MER1_type 85 149 -48 224 316 198 28 chr2 85381112 85381289 -165306565 - MIR SINE MIR -39 223 17 251 323 10 21 chr2 85381873 85381969 -165305885 + L2 LINE L2 3199 3293 -20 1477 189 70 31 chr2 85382343 85382702 -165305152 - MLT1A2 LTR MaLR 0 374 2 2137 131 3 0 chr2 85382918 85383216 -165304638 + AluSq SINE Alu 3 301 -12 52 30 0 0 chr2 85383950 85384016 -165303838 + AT_rich Low_complexity Low_complexity 1 66 0 245 277 29 28 chr2 85384378 85384485 -165303369 - MIR3 SINE MIR -39 169 58 4577 40 30 0 chr2 85385402 85385973 -165301881 + LTR10C LTR ERV1 4 591 0 819 239 65 32 chr2 85386527 85386836 -165301018 - HsTC2 DNA Tc2 -1579 319 1 498 234 171 0 chr2 85387105 85387263 -165300591 + MER58B DNA MER1_type 1 185 -156 754 224 6 49 chr2 85387263 85387446 -165300408 + AluSg/x SINE Alu 133 307 -5 448 261 17 17 chr2 85387446 85387561 -165300293 + MER58B DNA MER1_type 181 295 -46 194 346 157 35 chr2 85388550 85388868 -165298986 - L2 LINE L2 -337 2977 2621 1968 212 50 115 chr2 85388995 85389737 -165298117 + LTR8A LTR ERV1 34 727 0 25 51 0 0 chr2 85390151 85390190 -165297664 + AT_rich Low_complexity Low_complexity 1 39 0 28 48 0 0 chr2 85390285 85390327 -165297527 + AT_rich Low_complexity Low_complexity 1 42 0 781 199 0 0 chr2 85390338 85390479 -165297375 - MLT1D LTR MaLR -1 504 364 704 169 9 126 chr2 85390489 85390720 -165297134 - MLT1E2 LTR MaLR -301 204 1 291 234 40 48 chr2 85390792 85390916 -165296938 - L1MC5 LINE L1 -385 7576 7454 183 322 46 11 chr2 85392020 85392107 -165295747 - L2 LINE L2 -1 3312 3223 252 269 32 21 chr2 85392445 85392538 -165295316 - MLT2E LTR ERVL -54 574 481 1028 291 78 6 chr2 85392539 85392870 -165294984 - MLT2E LTR ERVL -260 368 10 260 250 0 0 chr2 85393670 85393722 -165294132 + Tigger3(Golem) DNA MER2_type 2976 3027 -2 784 288 123 60 chr2 85393756 85394259 -165293595 + MLT1H1 LTR MaLR 14 548 -7 750 157 107 0 chr2 85394345 85394485 -165293369 + Tigger5 DNA MER2_type 2077 2231 -92 1795 129 147 24 chr2 85395999 85396380 -165291474 - MSTA LTR MaLR 0 428 1 23 0 0 0 chr2 85397019 85397042 -165290812 + AT_rich Low_complexity Low_complexity 1 23 0 725 316 36 4 chr2 85397299 85397546 -165290308 + MIR SINE MIR 7 261 -1 3903 125 14 24 chr2 85397759 85398392 -165289462 + MER41B LTR ERV1 9 635 0 294 231 51 0 chr2 85398420 85398498 -165289356 - MIR SINE MIR -115 147 66 243 333 119 8 chr2 85399363 85399489 -165288365 - MIR SINE MIR -103 159 20 1160 169 91 0 chr2 85400604 85400732 -165287122 - L1MA9 LINE L1 -14 6298 6183 459 63 0 0 chr2 85400732 85400795 -165287059 + (TG)n Simple_repeat Simple_repeat 1 63 0 1160 169 91 0 chr2 85400795 85400909 -165286945 - L1MA9 LINE L1 -129 6183 6034 25 53 0 18 chr2 85401171 85401194 -165286660 + AT_rich Low_complexity Low_complexity 1 23 -33 1281 192 169 0 chr2 85401194 85401501 -165286353 - MER46B DNA MER2_type -2 234 1 25 53 0 18 chr2 85401501 85401534 -165286320 + AT_rich Low_complexity Low_complexity 23 56 0 265 323 39 26 chr2 85401735 85401890 -165285964 - HAL1 LINE L1 -1777 730 574 490 115 26 0 chr2 85402120 85402198 -165285656 - MADE1 DNA Mariner 0 80 1 288 321 97 0 chr2 85402786 85402920 -165284934 + L1ME LINE L1 5498 5644 -477 1786 116 43 13 chr2 85403902 85404205 -165283649 - L1PA8 LINE L1 0 6172 5861 1071 177 41 29 chr2 85404228 85404471 -165283383 - L1PA16 LINE L1 0 6166 5921 3630 138 14 5 chr2 85404471 85405053 -165282801 + L1PA16 LINE L1 5310 5896 -270 2323 64 3 7 chr2 85405852 85406148 -165281706 - AluY SINE Alu -16 295 1 2557 209 78 31 chr2 85407299 85407941 -165279913 + Tigger6a DNA MER2_type 38 709 -374 1445 47 0 171 chr2 85407943 85408218 -165279636 - L1P3 LINE L1 -526 5628 5401 414 79 32 0 chr2 85408218 85408280 -165279574 + L1PA6 LINE L1 6086 6150 -4 1353 211 73 6 chr2 85408321 85408677 -165279177 + Tigger6a DNA MER2_type 704 1083 0 434 263 35 103 chr2 85459592 85459725 -165228129 - MIR SINE MIR 0 262 150 1373 197 118 0 chr2 85459725 85460004 -165227850 + AluJb SINE Alu 1 312 0 434 263 35 103 chr2 85460004 85460102 -165227752 - MIR SINE MIR -112 150 47 872 281 37 56 chr2 85462414 85462947 -165224907 + PABL_B LTR ERV1 1 667 0 183 42 0 0 chr2 85463212 85463236 -165224618 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 672 356 124 8 chr2 85463575 85464083 -165223771 + L2 LINE L2 1133 1699 -1615 2077 235 79 38 chr2 85464321 85465304 -165222550 + L1MC3 LINE L1 378 1319 -5245 2000 145 0 0 chr2 85465304 85465593 -165222261 + AluSx SINE Alu 3 291 -21 180 0 0 0 chr2 85465594 85465614 -165222240 + (TA)n Simple_repeat Simple_repeat 1 20 0 2077 235 79 38 chr2 85465614 85466011 -165221843 + L1MC3 LINE L1 1318 1816 -4748 622 266 124 33 chr2 85466046 85466548 -165221306 + L1MC3 LINE L1 2103 2646 -3918 1723 142 0 0 chr2 85466548 85466808 -165221046 + AluSx SINE Alu 40 299 -13 622 266 124 33 chr2 85466808 85466983 -165220871 + L1MC3 LINE L1 2646 2804 -3760 286 286 38 0 chr2 85467073 85467178 -165220676 + L1MC3 LINE L1 2814 2922 -3642 * 7002 224 43 17 chr2 85467173 85470367 -165217487 + L1MC3 LINE L1 3962 7432 -771 2627 181 50 39 chr2 85470368 85470988 -165216866 + MER73 LTR ERVL 18 644 0 2832 213 86 11 chr2 85470989 85471702 -165216152 + L1MC3 LINE L1 7430 8195 -8 249 234 13 13 chr2 85473231 85473308 -165214546 - MLT1F LTR MaLR 0 542 466 227 281 0 0 chr2 85473616 85473673 -165214181 - MLT1F LTR MaLR -461 81 25 294 87 0 0 chr2 85474022 85474068 -165213786 + (CA)n Simple_repeat Simple_repeat 2 47 0 28 48 0 0 chr2 85474167 85474209 -165213645 + AT_rich Low_complexity Low_complexity 1 42 0 207 361 28 19 chr2 85474523 85474631 -165213223 - MIR SINE MIR -65 143 52 196 288 17 0 chr2 85475146 85475205 -165212649 - L3b LINE CR1 -299 1284 1225 2071 134 10 3 chr2 85475743 85476050 -165211804 - AluSg SINE Alu -1 309 1 1727 210 96 23 chr2 85476258 85476345 -165211509 - MER47B DNA MER2_type -1908 415 336 3843 155 95 8 chr2 85476345 85477105 -165210749 - LTR1B LTR ERV1 0 826 1 1727 210 96 23 chr2 85477105 85477403 -165210451 - MER47B DNA MER2_type -1987 336 2 2360 145 42 28 chr2 85478130 85478558 -165209296 + Tigger2a DNA MER2_type 1 434 0 5866 86 8 23 chr2 85479649 85480540 -165207314 + L1PA8A LINE L1 5225 6102 -29 552 343 86 7 chr2 85481081 85481414 -165206440 - L1ME3A LINE L1 -324 5846 5488 1203 195 20 79 chr2 85481437 85481740 -165206114 + AluJo SINE Alu 1 285 -27 23 54 0 0 chr2 85481740 85481777 -165206077 + AT_rich Low_complexity Low_complexity 1 37 0 29 47 0 0 chr2 85481805 85481848 -165206006 + AT_rich Low_complexity Low_complexity 1 43 0 302 237 0 0 chr2 85481956 85482015 -165205839 - FRAM/FAM SINE Alu -105 61 3 426 325 75 29 chr2 85482031 85482487 -165205367 - L1ME3A LINE L1 -769 5377 4901 197 254 123 41 chr2 85482490 85482612 -165205242 - L2 LINE L2 -1277 2037 1906 229 347 66 30 chr2 85483563 85483730 -165204124 - L2 LINE L2 -1012 2302 2130 709 245 0 6 chr2 85485061 85485224 -165202630 + LTR41 LTR ERVL 16 177 -596 792 211 31 122 chr2 85485366 85485693 -165202161 + LTR41 LTR ERVL 470 766 -7 458 307 90 25 chr2 85486830 85487074 -165200780 + MIR SINE MIR 3 262 0 2437 7 57 0 chr2 85487544 85487825 -165200029 + AluYa5 SINE Alu 1 297 -14 184 277 135 81 chr2 85488527 85488675 -165199179 - L2 LINE L2 -1051 2263 2108 1340 226 40 16 chr2 85489089 85489465 -165198389 + LTR37A LTR ERV1 21 405 -21 237 65 0 0 chr2 85489628 85489659 -165198195 + (T)n Simple_repeat Simple_repeat 1 31 0 21 57 0 0 chr2 85489972 85490007 -165197847 + AT_rich Low_complexity Low_complexity 1 35 0 13757 141 34 18 chr2 85490619 85492747 -165195107 + Tigger1 DNA MER2_type 2 2173 -245 1737 186 9 16 chr2 85492747 85493065 -165194789 + 7SLRNA srpRNA srpRNA 1 316 -4 13757 141 34 18 chr2 85493065 85493314 -165194540 + Tigger1 DNA MER2_type 2173 2417 -1 22 35 0 0 chr2 85493335 85493364 -165194490 + AT_rich Low_complexity Low_complexity 1 29 0 194 378 10 0 chr2 85493560 85493658 -165194196 - L2 LINE L2 -2372 942 844 3759 219 19 11 chr2 85493754 85494659 -165193195 + L1P LINE L1 4492 5403 -743 928 194 69 13 chr2 85494768 85495000 -165192854 - L1MA4 LINE L1 -131 6169 5925 2005 136 68 42 chr2 85495002 85495355 -165192499 + THE1B LTR MaLR 3 364 0 4012 89 6 0 chr2 85495355 85495897 -165191957 + THE1B-int LTR MaLR 1 545 -1035 4573 70 9 0 chr2 85495897 85496479 -165191375 - LTR14C LTR ERVK 0 587 1 25968 74 10 4 chr2 85496481 85497083 -165190771 - HERVK14C LTR ERVK -3 7414 6817 180 111 0 0 chr2 85497083 85497110 -165190744 + (CAG)n Simple_repeat Simple_repeat 2 28 0 25968 74 10 4 chr2 85497110 85499919 -165187935 - HERVK14C LTR ERVK -600 6817 3982 2731 129 71 4 chr2 85500625 85501104 -165186750 - MER9 LTR ERVK 0 511 1 31 26 0 0 chr2 85502396 85502434 -165185420 + AT_rich Low_complexity Low_complexity 1 38 0 1765 320 34 10 chr2 85502629 85503211 -165184643 + L1MDb LINE L1 138 733 -5810 1688 276 75 31 chr2 85503410 85504380 -165183474 + L1MDb LINE L1 1069 2081 -4459 3623 180 37 12 chr2 85504380 85505058 -165182796 - MSTA-int LTR MaLR -956 695 1 2001 143 127 18 chr2 85505058 85505444 -165182410 - MSTA LTR MaLR 0 428 1 3026 250 52 18 chr2 85505444 85506647 -165181207 + L1MDb LINE L1 3473 4715 -1825 53 17 0 0 chr2 85507521 85507581 -165180273 + AT_rich Low_complexity Low_complexity 1 60 0 197 146 21 0 chr2 85507699 85507747 -165180107 + (TA)n Simple_repeat Simple_repeat 1 49 0 362 206 44 0 chr2 85507755 85507823 -165180031 - FLAM_A SINE Alu -27 106 36 1519 296 10 28 chr2 85508099 85508609 -165179245 + L1MA8 LINE L1 -771 4294967025 -6523 917 258 3 48 chr2 85508724 85509165 -165178689 + L1MA8 LINE L1 770 1107 -4221 284 241 74 12 chr2 85509133 85509295 -165178559 + L1MA8 LINE L1 3322 3493 -2835 * 3819 202 117 89 chr2 85509295 85510490 -165177364 + MER52A LTR ERV1 1 1229 -526 796 187 81 56 chr2 85510742 85510940 -165176914 + MER52A LTR ERV1 1207 1409 -346 276 303 25 49 chr2 85510980 85511142 -165176712 + MER52A LTR ERV1 1593 1750 -5 5662 203 14 14 chr2 85511188 85512477 -165175377 + L1MA8 LINE L1 3512 4800 -1528 3109 162 13 7 chr2 85512594 85513456 -165174398 + L1MA8 LINE L1 5104 5975 -507 835 252 112 59 chr2 85513456 85513777 -165174077 - MER2 DNA MER2_type -7 338 1 2454 150 26 30 chr2 85513777 85514283 -165173571 + L1MA8 LINE L1 5968 6471 -2 1054 63 21 7 chr2 85514808 85514950 -165172904 - L1PA4 LINE L1 -234 5921 5778 406 21 0 0 chr2 85514950 85514995 -165172859 + L1PA6 LINE L1 6099 6145 -9 258 347 153 11 chr2 85515120 85515296 -165172558 + MIR SINE MIR 42 242 -20 236 158 35 0 chr2 85515833 85515890 -165171964 + (TA)n Simple_repeat Simple_repeat 1 59 0 3463 275 35 7 chr2 85516899 85518126 -165169728 - L1 LINE L1 -2711 3435 2174 4514 205 55 27 chr2 85518129 85518892 -165168962 + L1 LINE L1 3883 4692 -1454 423 0 0 0 chr2 85518892 85518939 -165168915 + (CA)n Simple_repeat Simple_repeat 2 48 0 4514 205 55 27 chr2 85518939 85519354 -165168500 + L1 LINE L1 4692 5094 -1052 3990 115 57 8 chr2 85519467 85520100 -165167754 + L1PA16 LINE L1 5494 6157 -9 21 36 0 0 chr2 85520100 85520128 -165167726 + AT_rich Low_complexity Low_complexity 1 28 0 192 97 0 0 chr2 85520405 85520436 -165167418 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 618 231 0 0 chr2 85520438 85520555 -165167299 - FLAM_A SINE Alu -16 117 1 1716 192 0 0 chr2 85520590 85520882 -165166972 - AluJb SINE Alu -20 292 1 2466 41 0 3 chr2 85520895 85521189 -165166665 - AluY SINE Alu -18 293 1 257 328 52 0 chr2 85521613 85521729 -165166125 + MIR SINE MIR 45 166 -96 27 29 0 0 chr2 85522660 85522694 -165165160 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr2 85522729 85522752 -165165102 + AT_rich Low_complexity Low_complexity 1 23 0 3859 186 56 24 chr2 85522800 85523671 -165164183 - L1MB1 LINE L1 -1 6167 5269 441 313 103 47 chr2 85523752 85524237 -165163617 + L1ME LINE L1 5280 5791 -330 183 80 0 0 chr2 85525104 85525129 -165162725 + (TATATG)n Simple_repeat Simple_repeat 4 28 0 1624 196 67 22 chr2 85525948 85526352 -165161502 - L1MC3 LINE L1 -11 7774 7353 1092 265 63 40 chr2 85526619 85527045 -165160809 + MER74B LTR ERVL 49 484 -138 195 69 0 0 chr2 85527256 85527285 -165160569 + (T)n Simple_repeat Simple_repeat 1 29 0 1939 120 7 18 chr2 85528390 85528698 -165159156 - AluSg SINE Alu 0 305 1 225 202 39 115 chr2 85528806 85528910 -165158944 - MLT1H LTR MaLR -16 533 438 252 309 0 0 chr2 85529023 85529091 -165158763 - MLT1H LTR MaLR -375 174 107 25 0 0 0 chr2 85529318 85529343 -165158511 + AT_rich Low_complexity Low_complexity 1 25 0 32 0 0 0 chr2 85530219 85530251 -165157603 + AT_rich Low_complexity Low_complexity 1 32 0 313 329 121 54 chr2 85531310 85531550 -165156304 - MIR SINE MIR 0 262 7 252 287 85 0 chr2 85532434 85532528 -165155326 - MLT1K LTR MaLR -6 582 481 202 263 0 40 chr2 85532574 85532650 -165155204 + C-rich Low_complexity Low_complexity 5 77 0 2060 131 0 7 chr2 85532875 85533180 -165154674 - AluSx SINE Alu -5 307 5 252 0 0 0 chr2 85534512 85534540 -165153314 + (TG)n Simple_repeat Simple_repeat 2 29 0 2188 84 3 14 chr2 85534540 85534826 -165153028 - AluY SINE Alu -27 284 2 4523 146 61 19 chr2 85535403 85536795 -165151059 + pTR5 LTR ERV1 741 2606 0 341 212 185 11 chr2 85537375 85537564 -165150290 - L1MEc LINE L1 -3010 3070 2849 1248 201 52 48 chr2 85537897 85538206 -165149648 - AluJo SINE Alu -2 310 1 580 233 70 89 chr2 85538272 85538789 -165149065 - L1MEc LINE L1 -3616 2464 2001 813 302 93 22 chr2 85538802 85539392 -165148462 - L1MEc LINE L1 -4307 1954 1323 316 254 24 85 chr2 85539393 85539558 -165148296 - MER39 LTR ERV1 0 707 553 698 200 0 8 chr2 85539558 85539683 -165148171 + FLAM_C SINE Alu 1 124 -19 709 206 148 11 chr2 85539701 85539890 -165147964 - MER39 LTR ERV1 -136 571 357 531 230 92 20 chr2 85539860 85540037 -165147817 - MER39 LTR ERV1 -362 180 1 * 351 275 81 48 chr2 85540037 85540372 -165147482 - L1MEc LINE L1 -4906 1176 831 439 254 173 10 chr2 85540984 85541291 -165146563 - L1MEc LINE L1 -5131 939 583 1617 175 60 169 chr2 85541336 85542115 -165145739 + LTR8A LTR ERV1 34 727 0 494 310 73 70 chr2 85542122 85542464 -165145390 - L1MEc LINE L1 -5520 550 208 183 42 0 0 chr2 85542545 85542569 -165145285 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 300 264 0 22 chr2 85542652 85542743 -165145111 - L1 LINE L1 -1675 4471 4383 2274 114 0 0 chr2 85542760 85543058 -165144796 + AluY SINE Alu 1 298 -13 329 252 159 9 chr2 85543364 85543471 -165144383 + MER5B DNA MER1_type 1 123 -55 667 178 0 0 chr2 85543472 85543590 -165144264 - FLAM_C SINE Alu -11 132 15 181 263 0 0 chr2 85543953 85543991 -165143863 - L2 LINE L2 -557 2757 2720 1847 151 0 28 chr2 85544733 85545024 -165142830 + AluJb SINE Alu 1 283 -29 855 73 0 0 chr2 85545024 85545148 -165142706 + (TAGA)n Simple_repeat Simple_repeat 4 127 0 22 94 0 0 chr2 85545583 85545647 -165142207 + AT_rich Low_complexity Low_complexity 1 64 0 1374 210 153 38 chr2 85545818 85546444 -165141410 + LTR48 LTR ERV1 1 644 0 28 61 0 0 chr2 85547420 85547469 -165140385 + AT_rich Low_complexity Low_complexity 1 49 0 397 210 72 29 chr2 85547865 85548003 -165139851 - LTR16A1 LTR ERVL -3 454 311 377 352 85 10 chr2 85549377 85549576 -165138278 - MIR SINE MIR -1 261 48 189 74 0 0 chr2 85551238 85551265 -165136589 + (TAA)n Simple_repeat Simple_repeat 2 28 0 1194 232 69 0 chr2 85551408 85551654 -165136200 + Tigger7 DNA MER2_type 10 272 -461 588 183 0 0 chr2 85551655 85551748 -165136106 + Tigger7 DNA MER2_type 2394 2486 -1 1896 112 42 3 chr2 85551789 85552075 -165135779 - AluSc SINE Alu -12 297 1 188 293 104 47 chr2 85552155 85552261 -165135593 - MIR SINE MIR -148 114 3 660 321 85 57 chr2 85552382 85552906 -165134948 + L2 LINE L2 2777 3313 0 297 0 0 0 chr2 85552939 85552972 -165134882 + (CA)n Simple_repeat Simple_repeat 2 34 0 606 228 101 0 chr2 85553042 85553191 -165134663 + MER3 DNA MER1_type 35 198 -11 669 336 67 27 chr2 85553338 85553740 -165134114 + L2 LINE L2 2896 3313 0 261 57 0 0 chr2 85553890 85553925 -165133929 + (TG)n Simple_repeat Simple_repeat 2 36 0 353 236 22 0 chr2 85554209 85554298 -165133556 + MER96B DNA MER1_type? 20 110 -307 552 180 47 99 chr2 85554377 85554553 -165133301 - MER96B DNA MER1_type? -151 266 103 731 179 0 108 chr2 85554553 85554765 -165133089 + MER53 DNA DNA 1 189 0 552 180 47 99 chr2 85554765 85554821 -165133033 - MER96B DNA MER1_type? -314 103 46 3211 82 5 7 chr2 85555224 85555673 -165132181 + LTR7 LTR ERV1 1 448 -2 309 26 0 0 chr2 85556284 85556322 -165131532 + (TG)n Simple_repeat Simple_repeat 1 38 0 288 137 0 0 chr2 85556328 85556379 -165131475 + (GA)n Simple_repeat Simple_repeat 2 52 0 21 0 0 0 chr2 85556526 85556547 -165131307 + AT_rich Low_complexity Low_complexity 1 21 0 1108 204 95 73 chr2 85556572 85557024 -165130830 + MLT1C LTR MaLR 1 462 -5 291 276 41 10 chr2 85557133 85557231 -165130623 - MER5A DNA MER1_type -77 112 12 2416 89 0 6 chr2 85558351 85558665 -165129189 + AluSq SINE Alu 1 312 -1 233 226 71 0 chr2 85559152 85559236 -165128618 + L1MC5 LINE L1 7687 7776 -185 378 369 7 28 chr2 85559456 85559597 -165128257 + L2 LINE L2 3134 3271 -1 326 275 88 27 chr2 85560244 85560362 -165127492 + MIR SINE MIR 25 150 -58 27 49 0 0 chr2 85560829 85560870 -165126984 + AT_rich Low_complexity Low_complexity 1 41 0 277 301 84 36 chr2 85561137 85561469 -165126385 - L1ME LINE L1 -535 6438 6091 282 56 0 0 chr2 85561472 85561508 -165126346 + (TG)n Simple_repeat Simple_repeat 1 36 0 333 253 56 9 chr2 85561735 85561862 -165125992 - L1ME LINE L1 -1144 5813 5687 1530 211 13 60 chr2 85562030 85562413 -165125441 + MLT1A1 LTR MaLR 1 365 0 196 220 20 20 chr2 85562694 85562744 -165125110 + L2 LINE L2 2226 2275 -1039 2700 208 47 50 chr2 85563030 85563255 -165124599 - L1MB8 LINE L1 -1 6177 5953 2418 182 55 14 chr2 85563255 85563744 -165124110 - LTR22 LTR ERVK 0 509 1 2700 208 47 50 chr2 85563744 85564312 -165123542 - L1MB8 LINE L1 -225 5953 5387 1933 246 96 38 chr2 85564310 85564378 -165123476 - L1ME LINE L1 -1262 5695 5632 * 2258 92 41 0 chr2 85564378 85564672 -165123182 - AluSg SINE Alu -4 306 1 1933 246 96 38 chr2 85564672 85565471 -165122383 - L1ME LINE L1 -1325 5632 4778 4484 254 52 19 chr2 85565486 85567384 -165120470 - L1MEc LINE L1 -2259 4698 2774 259 288 0 0 chr2 85567874 85567954 -165119900 - L1MEc LINE L1 -4540 2417 2338 810 280 58 6 chr2 85568085 85568431 -165119423 - L1MEc LINE L1 -4790 2169 1806 553 234 117 0 chr2 85568432 85568569 -165119285 - L1MEc LINE L1 -5751 1108 956 * 2208 172 19 43 chr2 85568565 85569128 -165118726 + L1MA4 LINE L1 4001 4550 -1596 1733 157 3 37 chr2 85569128 85569427 -165118427 + AluSq SINE Alu 1 289 -24 3278 184 25 19 chr2 85569495 85570874 -165116980 + L1MA4 LINE L1 4533 5926 -374 1970 153 30 35 chr2 85570875 85571241 -165116613 - THE1B LTR MaLR 0 364 1 6808 134 37 1 chr2 85571241 85572244 -165115610 - THE1B-int LTR MaLR 0 1580 542 4782 45 10 3 chr2 85572244 85572827 -165115027 + LTR14C LTR ERVK 1 587 0 29805 82 3 12 chr2 85572828 85576854 -165111000 + HERVK14C LTR ERVK 2 3993 -3424 4634 171 51 12 chr2 85576958 85578070 -165109784 + L1PA16 LINE L1 5018 6163 -3 386 296 6 45 chr2 85578634 85578810 -165109044 + A-rich Low_complexity Low_complexity 3 171 0 691 231 113 96 chr2 85578865 85579619 -165108235 - L1M4 LINE L1 -1162 4984 4218 2027 189 29 31 chr2 85579631 85580145 -165107709 + L1MA8 LINE L1 5773 6285 -6 425 293 203 12 chr2 85580193 85580616 -165107238 - L1MEc LINE L1 -4030 2366 1863 234 0 0 0 chr2 85580809 85580835 -165107019 + (TA)n Simple_repeat Simple_repeat 2 27 0 1688 137 19 4 chr2 85580835 85581097 -165106757 - AluSx SINE Alu -26 286 21 461 309 118 20 chr2 85581405 85581761 -165106093 - L1MEc LINE L1 -4530 1866 1476 240 248 64 67 chr2 85582020 85582318 -165105536 - L1MEc LINE L1 -5001 1204 908 4037 200 62 5 chr2 85583003 85583798 -165104056 - MER21B LTR ERV1 -23 840 1 724 191 77 41 chr2 85583929 85584123 -165103731 + MLT1F1 LTR MaLR 367 567 0 28 82 0 27 chr2 85584701 85584811 -165103043 + AT_rich Low_complexity Low_complexity 1 107 0 24 0 0 0 chr2 85585065 85585089 -165102765 + AT_rich Low_complexity Low_complexity 1 24 0 420 207 0 0 chr2 85585727 85585809 -165102045 - MER58A DNA MER1_type -8 216 135 346 282 0 0 chr2 85585842 85585913 -165101941 - MER58A DNA MER1_type -36 71 1 349 182 0 0 chr2 85586308 85586363 -165101491 + Tigger5 DNA MER2_type 1 55 -2268 * 352 233 0 0 chr2 85586332 85586405 -165101449 + Tigger5 DNA MER2_type 2251 2323 0 1877 180 14 39 chr2 85586513 85586985 -165100869 + MER89 LTR ERV1 1 559 0 976 171 18 0 chr2 85587553 85587723 -165100131 - AluJb SINE Alu -5 307 135 418 277 124 23 chr2 85588354 85588531 -165099323 + MIR SINE MIR 2 196 -66 25 51 0 0 chr2 85588702 85588741 -165099113 + AT_rich Low_complexity Low_complexity 1 39 0 515 226 78 79 chr2 85589115 85590142 -165097712 - L1MC5 LINE L1 0 7808 6782 1852 169 3 0 chr2 85590142 85590450 -165097404 - AluJb SINE Alu -1 311 3 515 226 78 79 chr2 85590450 85590871 -165096983 - L1MC5 LINE L1 -1026 6782 6720 438 20 0 0 chr2 85590871 85590922 -165096932 + (CA)n Simple_repeat Simple_repeat 2 52 0 515 226 78 79 chr2 85590922 85591659 -165096195 - L1MC5 LINE L1 -1088 6720 5984 337 346 11 16 chr2 85591661 85591843 -165096011 - L1 LINE L1 -2526 3620 3440 2982 126 21 9 chr2 85591975 85592501 -165095353 - L1MA5A LINE L1 0 6297 5766 753 111 8 0 chr2 85592501 85592627 -165095227 - AluY SINE Alu -1 310 184 5234 155 24 34 chr2 85592627 85594142 -165093712 - L1MA5A LINE L1 -577 5720 4232 3849 173 17 50 chr2 85594151 85594909 -165092945 + MER44D DNA MER2_type 1 605 0 240 329 116 13 chr2 85594916 85595305 -165092549 - L1 LINE L1 -3038 3108 2680 1058 187 74 0 chr2 85595397 85595627 -165092227 - L1MA7 LINE L1 -32 6259 6013 952 112 13 7 chr2 85595644 85595796 -165092058 - L1 LINE L1 -1429 4717 4565 319 258 111 91 chr2 85595955 85596207 -165091647 - HAL1b LINE L1 -512 836 580 295 217 11 22 chr2 85596214 85596306 -165091548 + CT-rich Low_complexity Low_complexity 5 95 0 243 339 33 25 chr2 85596322 85596443 -165091411 - MIR SINE MIR -137 125 4 1231 179 53 73 chr2 85596815 85597117 -165090737 - AluJo SINE Alu -16 296 1 28 0 0 0 chr2 85597827 85597855 -165089999 + AT_rich Low_complexity Low_complexity 1 28 0 1802 129 92 35 chr2 85598409 85598726 -165089128 - MER1B DNA MER1_type 0 337 3 2203 168 53 2 chr2 85598884 85599295 -165088559 - MSTB1 LTR MaLR 0 432 1 288 0 0 0 chr2 85599937 85599969 -165087885 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1909 133 0 14 chr2 85599984 85600270 -165087584 - AluSx SINE Alu -30 282 1 313 398 0 8 chr2 85600776 85600904 -165086950 - MIR SINE MIR -63 145 19 282 273 0 0 chr2 85601657 85601712 -165086142 - MIR SINE MIR -135 73 19 2203 213 78 13 chr2 85601834 85602359 -165085495 - MER89 LTR ERV1 0 559 1 6410 250 55 19 chr2 85602359 85604603 -165083251 - MER89-int LTR ERV1 0 6801 4419 2096 226 18 59 chr2 85604603 85605098 -165082756 + MLT2B3 LTR ERVL 1 475 -79 553 149 0 0 chr2 85605459 85605553 -165082301 + MLT2B2 LTR ERVL 422 515 0 3077 274 40 21 chr2 85605586 85606802 -165081052 - MER89-int LTR ERV1 -2410 4391 3124 374 196 10 62 chr2 85606823 85606920 -165080934 + MLT2C2 LTR ERVL 1 92 -428 2074 153 40 6 chr2 85606920 85607272 -165080582 - THE1B LTR MaLR 0 364 1 9653 121 39 19 chr2 85607272 85608820 -165079034 - THE1B-int LTR MaLR 0 1580 2 657 179 65 8 chr2 85608852 85608975 -165078879 - THE1C LTR MaLR -245 130 1 * 786 193 76 144 chr2 85608975 85609383 -165078471 + MLT2C2 LTR ERVL 85 464 0 1374 248 64 94 chr2 85609449 85609982 -165077872 - MER89-int LTR ERV1 -3737 3064 2548 2859 254 31 19 chr2 85610282 85611052 -165076802 - MER89-int LTR ERV1 -4270 2531 1753 276 197 0 0 chr2 85611056 85611117 -165076737 - L1MA4 LINE L1 -3 6297 6237 301 274 20 20 chr2 85611125 85611227 -165076627 - MER89-int LTR ERV1 -5044 1757 1656 2646 238 39 39 chr2 85611269 85612043 -165075811 - MER89-int LTR ERV1 -5143 1658 885 1054 167 35 5 chr2 85612176 85612374 -165075480 - MER89 LTR ERV1 0 559 356 266 266 0 25 chr2 85613514 85613593 -165074261 - Tigger5 DNA MER2_type -5 2318 2242 * 491 211 22 0 chr2 85613573 85613663 -165074191 + Tigger5 DNA MER2_type 2230 2321 -2 1463 201 58 19 chr2 85613965 85614273 -165073581 + MLT1A1 LTR MaLR 1 320 -45 1326 178 114 69 chr2 85614275 85614607 -165073247 + MER7A DNA MER2_type 2 346 0 1799 174 8 34 chr2 85615233 85615589 -165072265 + MER7A DNA MER2_type 2 346 0 635 267 115 7 chr2 85616675 85616888 -165070966 + MIR SINE MIR 1 228 -34 2186 123 3 0 chr2 85616940 85617240 -165070614 + AluSg SINE Alu 2 302 -8 808 224 0 50 chr2 85617365 85617584 -165070270 - MER3 DNA MER1_type 0 209 2 371 295 20 7 chr2 85617659 85617808 -165070046 + (TA)n Simple_repeat Simple_repeat 2 152 0 24 67 0 0 chr2 85618898 85618943 -165068911 + AT_rich Low_complexity Low_complexity 1 45 0 1856 183 0 17 chr2 85620753 85621097 -165066757 + MER7A DNA MER2_type 2 337 -9 1316 197 17 41 chr2 85621742 85622037 -165065817 + AluJo SINE Alu 1 288 -24 462 275 99 63 chr2 85624179 85624339 -165063515 + MER34B LTR ERV1 183 336 -229 2134 138 0 3 chr2 85624339 85624643 -165063211 - AluSq SINE Alu -10 303 1 462 275 99 63 chr2 85624643 85624846 -165063008 + MER34B LTR ERV1 336 559 -6 213 94 0 0 chr2 85625066 85625098 -165062756 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 1250 251 120 10 chr2 85625527 85625926 -165061928 + MER110 LTR ERV1 7 449 -42 189 0 0 0 chr2 85625926 85625947 -165061907 + (A)n Simple_repeat Simple_repeat 1 21 0 222 115 0 58 chr2 85626907 85626959 -165060895 + (CAAAAA)n Simple_repeat Simple_repeat 1 49 0 531 231 96 35 chr2 85626959 85627158 -165060696 - MLT1C LTR MaLR -163 304 94 430 275 96 68 chr2 85627926 85628311 -165059543 + MER110-int LTR ERV1 175 570 -4077 1417 303 82 92 chr2 85629341 85630583 -165057271 + MER110-int LTR ERV1 1652 2906 -1741 2181 109 7 0 chr2 85630583 85630886 -165056968 - AluSg SINE Alu -5 305 1 1417 303 82 92 chr2 85630886 85630923 -165056931 + MER110-int LTR ERV1 2906 2942 -1705 1595 154 73 39 chr2 85630923 85631279 -165056575 - THE1C LTR MaLR -4 371 4 1417 303 82 92 chr2 85631279 85632279 -165055575 + MER110-int LTR ERV1 2942 3908 -739 23 54 0 0 chr2 85632283 85632320 -165055534 + AT_rich Low_complexity Low_complexity 1 37 0 240 280 13 0 chr2 85632742 85632817 -165055037 - MLT1E LTR MaLR 0 593 518 * 531 233 175 7 chr2 85632813 85633017 -165054837 - MLT1E LTR MaLR -346 247 11 255 269 64 0 chr2 85633371 85633449 -165054405 + MER110 LTR ERV1 1 83 -408 2539 144 64 52 chr2 85633527 85634046 -165053808 + LTR1B LTR ERV1 1 525 -301 876 166 18 12 chr2 85634073 85634242 -165053612 + LTR1B LTR ERV1 657 826 0 1026 274 17 3 chr2 85634262 85634550 -165053304 + MER110 LTR ERV1 33 324 -167 2551 4 0 0 chr2 85634651 85634926 -165052928 - AluYa5 SINE Alu -20 291 17 563 205 20 46 chr2 85634984 85635135 -165052719 + MER110 LTR ERV1 337 483 -8 517 344 28 11 chr2 85635499 85635679 -165052175 + MER91A DNA MER1_type 14 196 0 24 0 0 0 chr2 85637318 85637342 -165050512 + AT_rich Low_complexity Low_complexity 1 24 0 581 290 27 16 chr2 85638322 85638505 -165049349 + MIR SINE MIR 68 252 -10 223 319 0 11 chr2 85638686 85638780 -165049074 + (TTA)n Simple_repeat Simple_repeat 3 95 0 601 294 140 5 chr2 85638782 85638996 -165048858 - MIR SINE MIR -2 260 18 392 273 65 7 chr2 85640398 85640537 -165047317 + MIR SINE MIR 116 262 0 327 356 34 0 chr2 85640668 85640786 -165047068 + MIR SINE MIR 21 142 -120 53 30 0 0 chr2 85640862 85640929 -165046925 + AT_rich Low_complexity Low_complexity 1 67 0 190 325 200 18 chr2 85641561 85641857 -165045997 - L2 LINE L2 -302 2970 2627 23 0 0 0 chr2 85642360 85642383 -165045471 + AT_rich Low_complexity Low_complexity 1 23 0 882 209 206 3 chr2 85642404 85642696 -165045158 - Charlie5 DNA MER1_type -20 2592 2242 560 171 60 0 chr2 85642698 85642815 -165045039 - Charlie5 DNA MER1_type -2484 128 5 251 154 123 31 chr2 85643418 85643483 -165044371 + L1MC5 LINE L1 7843 7913 -48 192 262 180 0 chr2 85643511 85643572 -165044282 - MIR SINE MIR -190 72 1 552 283 93 26 chr2 85643776 85644002 -165043852 - MIR SINE MIR 0 262 22 28 0 0 0 chr2 85645137 85645165 -165042689 + AT_rich Low_complexity Low_complexity 1 28 0 874 184 32 16 chr2 85646082 85646267 -165041587 + AluSx SINE Alu 2 189 -123 222 276 0 23 chr2 85646280 85646367 -165041487 + A-rich Low_complexity Low_complexity 5 89 0 2331 218 43 16 chr2 85646869 85647360 -165040494 - MLT2B2 LTR ERVL -7 508 5 1738 212 110 70 chr2 85647365 85648237 -165039617 - LTR1B LTR ERV1 0 1020 1 306 73 0 0 chr2 85649010 85649051 -165038803 + (TG)n Simple_repeat Simple_repeat 2 42 0 4153 174 8 24 chr2 85649385 85650177 -165037677 + MER4E LTR ERV1 1 779 0 4007 89 11 0 chr2 85650755 85651303 -165036551 + MER41A LTR ERV1 1 554 0 1780 99 50 32 chr2 85651389 85651672 -165036182 + MER41A-int LTR ERV1 1 288 -7468 * 7268 103 30 3 chr2 85651670 85653352 -165034502 + MER41A-int LTR ERV1 4120 5910 -36 3999 98 4 0 chr2 85653368 85653920 -165033934 + MER41A LTR ERV1 1 554 0 23 54 0 0 chr2 85654091 85654128 -165033726 + AT_rich Low_complexity Low_complexity 1 37 0 184 385 0 0 chr2 85655117 85655182 -165032672 - L2 LINE L2 -5 3308 3244 2416 72 3 7 chr2 85655196 85655503 -165032351 - AluSp SINE Alu -7 306 1 265 277 8 0 chr2 85656369 85656488 -165031366 + (TA)n Simple_repeat Simple_repeat 1 120 0 22 0 0 0 chr2 85656670 85656692 -165031162 + AT_rich Low_complexity Low_complexity 1 22 0 435 190 0 25 chr2 85657055 85657176 -165030678 + CT-rich Low_complexity Low_complexity 4 121 0 338 240 111 53 chr2 85657215 85657386 -165030468 - L1MC/D LINE L1 -2355 5453 5273 2358 81 3 0 chr2 85657946 85658241 -165029613 - AluSp SINE Alu -17 296 1 21 57 0 0 chr2 85658471 85658506 -165029348 + AT_rich Low_complexity Low_complexity 1 35 0 294 29 0 0 chr2 85659350 85659385 -165028469 + (TG)n Simple_repeat Simple_repeat 1 35 0 27 0 0 0 chr2 85659857 85659884 -165027970 + AT_rich Low_complexity Low_complexity 1 27 0 24 32 0 0 chr2 85659932 85659963 -165027891 + AT_rich Low_complexity Low_complexity 1 31 0 2361 51 7 3 chr2 85659979 85660274 -165027580 - AluY SINE Alu -14 297 2 297 250 107 12 chr2 85660902 85660986 -165026868 - MER81 DNA DNA -22 92 1 316 267 37 30 chr2 85661122 85661257 -165026597 + PABL_A LTR ERV1 1 136 -524 755 211 53 26 chr2 85661356 85661546 -165026308 + PABL_B LTR ERV1 473 667 0 48 32 0 0 chr2 85661609 85661671 -165026183 + AT_rich Low_complexity Low_complexity 1 62 0 1673 157 141 21 chr2 85662090 85662472 -165025382 + MSTA LTR MaLR 1 428 0 1494 300 111 18 chr2 85663216 85663895 -165023959 - L2 LINE L2 -2010 1304 563 262 326 160 44 chr2 85663975 85664294 -165023560 + L2 LINE L2 2958 3313 0 1242 185 96 7 chr2 85665376 85665646 -165022208 + AluSq SINE Alu 6 299 -14 492 322 19 80 chr2 85665648 85665769 -165022085 + MIR SINE MIR 8 106 -156 2093 125 0 0 chr2 85665769 85666072 -165021782 + AluSx SINE Alu 3 305 -7 492 322 19 80 chr2 85666072 85666214 -165021640 + MIR SINE MIR 106 255 -7 417 298 106 14 chr2 85667461 85667753 -165020101 + L1ME3A LINE L1 4950 5268 -878 1788 265 120 32 chr2 85667783 85668572 -165019282 + L1ME3A LINE L1 5312 6170 0 363 281 100 19 chr2 85668679 85668839 -165019015 - L1M4 LINE L1 -801 5345 5173 316 326 12 0 chr2 85668961 85669047 -165018807 + MIR3 SINE MIR 71 157 -51 255 295 74 21 chr2 85669100 85669195 -165018659 + MIR SINE MIR 50 149 -113 237 83 0 0 chr2 85669212 85669248 -165018606 + (TG)n Simple_repeat Simple_repeat 1 36 0 21 36 0 0 chr2 85669371 85669399 -165018455 + AT_rich Low_complexity Low_complexity 1 28 0 30 77 0 0 chr2 85669419 85669484 -165018370 + AT_rich Low_complexity Low_complexity 1 65 0 1159 286 71 26 chr2 85669545 85670151 -165017703 - L1MC4 LINE L1 -130 7912 7280 1554 224 16 19 chr2 85670361 85670727 -165017127 + MLT1A1 LTR MaLR 1 365 0 2483 114 17 8 chr2 85670906 85671267 -165016587 + THE1B LTR MaLR 1 364 0 2143 104 7 3 chr2 85671846 85672145 -165015709 - AluSq SINE Alu -13 300 1 344 228 0 35 chr2 85672240 85672385 -165015469 + CT-rich Low_complexity Low_complexity 1 140 0 289 354 10 0 chr2 85672807 85672903 -165014951 - MIR3 SINE MIR -6 202 106 210 275 14 29 chr2 85673387 85673456 -165014398 + L2 LINE L2 3201 3268 -4 1051 320 87 0 chr2 85674002 85674392 -165013462 + LTR16A LTR ERVL 7 430 -20 217 358 58 29 chr2 85676283 85676420 -165011434 - MIR3 SINE MIR -18 190 50 21 0 0 0 chr2 85677117 85677138 -165010716 + AT_rich Low_complexity Low_complexity 1 21 0 1873 101 90 0 chr2 85677296 85677574 -165010280 - AluSx SINE Alu -9 303 1 1292 207 115 12 chr2 85678277 85678614 -165009240 + MLT1D LTR MaLR 132 539 -3 474 18 0 0 chr2 85678961 85679016 -165008838 + (CA)n Simple_repeat Simple_repeat 2 56 0 22 0 0 0 chr2 85679772 85679794 -165008060 + AT_rich Low_complexity Low_complexity 1 22 0 877 96 0 16 chr2 85679938 85680063 -165007791 + AluSg/x SINE Alu 170 292 -18 245 239 211 0 chr2 85680545 85680616 -165007238 - MIR3 SINE MIR -40 168 83 550 282 59 31 chr2 85682118 85682373 -165005481 - MIR SINE MIR 0 262 1 2330 58 24 0 chr2 85682807 85683098 -165004756 + AluY SINE Alu 1 298 -13 1192 167 50 21 chr2 85683738 85684019 -165003835 - L1MA4 LINE L1 0 6300 6012 315 0 0 0 chr2 85685755 85685790 -165002064 + (TG)n Simple_repeat Simple_repeat 1 35 0 27 92 0 0 chr2 85685792 85685868 -165001986 + AT_rich Low_complexity Low_complexity 1 76 0 200 260 0 13 chr2 85686483 85686560 -165001294 + CT-rich Low_complexity Low_complexity 1 76 0 21 36 0 0 chr2 85686818 85686846 -165001008 + AT_rich Low_complexity Low_complexity 1 28 0 631 192 24 0 chr2 85687246 85687371 -165000483 + Charlie4 DNA MER1_type 1818 1945 -16 239 225 62 88 chr2 85687748 85687828 -165000026 - L2 LINE L2 0 3313 3236 372 155 0 0 chr2 85688147 85688218 -164999636 + (TG)n Simple_repeat Simple_repeat 2 72 0 719 330 9 60 chr2 85688963 85689296 -164998558 + MLT1I LTR MaLR 93 408 -1 22 35 0 0 chr2 85689382 85689411 -164998443 + AT_rich Low_complexity Low_complexity 1 29 0 1699 213 22 90 chr2 85689709 85690245 -164997609 - MLT1D LTR MaLR -5 500 1 1280 237 94 25 chr2 85691044 85691482 -164996372 - MER110A LTR ERV1 0 468 1 798 133 15 0 chr2 85691920 85692055 -164995799 + L1PA8 LINE L1 6035 6171 -1 1049 190 0 0 chr2 85692637 85692816 -164995038 - AluJ SINE Alu -1 311 133 297 89 0 0 chr2 85692816 85692861 -164994993 + (CA)n Simple_repeat Simple_repeat 2 46 0 274 198 70 0 chr2 85692861 85692947 -164994907 + (TA)n Simple_repeat Simple_repeat 1 92 0 358 69 35 0 chr2 85692994 85693052 -164994802 + (TA)n Simple_repeat Simple_repeat 1 60 0 746 183 0 0 chr2 85693052 85693178 -164994676 - AluJ SINE Alu -186 126 1 676 240 7 14 chr2 85693210 85693356 -164994498 - MER5A DNA MER1_type -44 145 1 350 265 68 62 chr2 85694822 85694984 -164992870 - L1ME2 LINE L1 -10 6154 5992 * 3009 279 44 26 chr2 85694952 85696320 -164991534 - L1MEc LINE L1 -4512 1884 493 1631 99 0 96 chr2 85696323 85696615 -164991239 - AluSg SINE Alu 0 310 47 25 65 0 0 chr2 85696617 85696663 -164991191 + AT_rich Low_complexity Low_complexity 1 46 0 236 206 22 76 chr2 85696671 85696763 -164991091 - L1MA9 LINE L1 -67 6245 6159 1078 303 54 27 chr2 85696777 85697219 -164990635 - L1MEc LINE L1 -5905 491 38 246 207 17 17 chr2 85698443 85698501 -164989353 + GA-rich Low_complexity Low_complexity 1 58 0 1320 236 19 19 chr2 85700148 85700509 -164987345 + MLT1A2 LTR MaLR 1 361 -13 1909 187 50 27 chr2 85700925 85701363 -164986491 - L1MB1 LINE L1 -329 5839 5392 1021 237 29 4 chr2 85701359 85701604 -164986250 + L1 LINE L1 4807 5057 -1089 * 1342 141 70 0 chr2 85701596 85701838 -164986016 - L1MA8 LINE L1 -38 6253 5995 905 171 36 0 chr2 85701925 85702118 -164985736 + L1 LINE L1 5042 5241 -905 1875 194 9 0 chr2 85702129 85702479 -164985375 + MER47A DNA MER2_type 13 365 -1 532 147 7 63 chr2 85702494 85702637 -164985217 + L1M LINE L1 5254 5388 -780 222 358 53 0 chr2 85702954 85703105 -164984749 + L3 LINE CR1 1277 1435 -142 1938 200 52 48 chr2 85703469 85704029 -164983825 - MER68 LTR ERV1 0 562 1 782 247 98 102 chr2 85704742 85705260 -164982594 - MLT1E2 LTR MaLR -108 518 3 1394 96 5 5 chr2 85706052 85706240 -164981614 + AluY SINE Alu 1 188 -123 32 26 0 0 chr2 85706261 85706300 -164981554 + AT_rich Low_complexity Low_complexity 1 39 0 738 188 39 28 chr2 85706566 85706747 -164981107 + L1MC4 LINE L1 6731 6913 -1129 186 103 0 0 chr2 85706747 85706776 -164981078 + (TC)n Simple_repeat Simple_repeat 2 30 0 294 300 0 0 chr2 85706776 85706876 -164980978 + (TA)n Simple_repeat Simple_repeat 2 101 0 306 247 37 0 chr2 85706882 85706963 -164980891 - L1MCa LINE L1 -4348 2078 1995 699 130 20 7 chr2 85706963 85707109 -164980745 + GA-rich Low_complexity Low_complexity 2 149 0 1716 237 131 43 chr2 85707124 85707798 -164980056 + L1MC4 LINE L1 7140 7872 -170 1128 233 50 64 chr2 85707898 85708121 -164979733 - L1M4 LINE L1 -530 5648 5423 2098 127 3 13 chr2 85708121 85708429 -164979425 - AluSg SINE Alu -1 309 5 1128 233 50 64 chr2 85708429 85708442 -164979412 - L1M4 LINE L1 -755 5423 5411 2268 55 34 7 chr2 85708442 85708735 -164979119 - AluY SINE Alu -10 301 1 1128 233 50 64 chr2 85708735 85710165 -164977689 - L1M4 LINE L1 -767 5411 3883 13440 190 63 11 chr2 85710171 85710506 -164977348 - L1PB1 LINE L1 0 6867 6551 369 93 0 0 chr2 85710506 85710560 -164977294 + (TG)n Simple_repeat Simple_repeat 2 55 0 13440 190 63 11 chr2 85710560 85716133 -164971721 - L1PB1 LINE L1 -316 6551 634 1105 169 5 0 chr2 85716135 85716330 -164971524 - L1PB1 LINE L1 -6665 198 3 4843 150 59 3 chr2 85716700 85717562 -164970292 - Tigger3b DNA MER2_type 0 1231 322 2224 116 0 0 chr2 85717719 85718030 -164969824 + AluY SINE Alu 1 311 0 673 275 116 21 chr2 85718032 85718566 -164969288 - L1M4 LINE L1 -2525 3621 3037 511 268 0 16 chr2 85718586 85718713 -164969141 - MER33 DNA MER1_type -189 135 11 474 218 0 0 chr2 85719593 85719680 -164968174 + MER5A DNA MER1_type 27 113 -76 526 271 33 13 chr2 85719758 85719909 -164967945 + MER5B DNA MER1_type 23 176 -2 235 226 57 19 chr2 85719999 85720052 -164967802 - MER5A DNA MER1_type -128 61 7 237 178 58 3 chr2 85720749 85720801 -164967053 - MIR SINE MIR -121 87 37 1682 253 55 73 chr2 85721379 85721734 -164966120 - L1ME2 LINE L1 -10 6548 6188 2122 93 0 0 chr2 85721734 85722004 -164965850 + AluSp SINE Alu 18 287 -26 1682 253 55 73 chr2 85722004 85722451 -164965403 - L1ME2 LINE L1 -370 6188 5761 1554 272 105 38 chr2 85722459 85722525 -164965329 - L1ME2 LINE L1 -848 5692 5632 1989 155 3 3 chr2 85722525 85722828 -164965026 + AluSx SINE Alu 2 304 -8 1554 272 105 38 chr2 85722828 85723809 -164964045 - L1ME2 LINE L1 -908 5632 4575 705 296 95 17 chr2 85723934 85724462 -164963392 - L1ME2 LINE L1 -4511 2029 1461 21 0 0 0 chr2 85724709 85724730 -164963124 + GC_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 85727362 85727385 -164960469 + AT_rich Low_complexity Low_complexity 1 23 0 680 259 106 59 chr2 85727449 85727855 -164959999 - Charlie2a DNA MER1_type -654 2208 1784 635 284 6 38 chr2 85727862 85728045 -164959809 - MER5B DNA MER1_type 0 178 2 1548 207 0 10 chr2 85728062 85728371 -164959483 - AluJo SINE Alu -6 306 1 298 239 22 11 chr2 85728391 85728483 -164959371 - Charlie2a DNA MER1_type -1105 1757 1665 1760 146 0 0 chr2 85728623 85728898 -164958956 + AluY SINE Alu 35 309 -2 21 0 0 0 chr2 85729432 85729453 -164958401 + AT_rich Low_complexity Low_complexity 1 21 0 1652 122 0 0 chr2 85729593 85729831 -164958023 - AluSg1 SINE Alu -17 292 55 304 321 75 0 chr2 85730171 85730277 -164957577 - MIR SINE MIR -60 148 35 549 250 6 28 chr2 85731356 85731536 -164956318 - L1ME3A LINE L1 -236 5934 5759 253 304 98 25 chr2 85731543 85731829 -164956025 + L1MEc LINE L1 1409 1715 -4681 27 29 0 0 chr2 85731942 85731976 -164955878 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr2 85732137 85732166 -164955688 + AT_rich Low_complexity Low_complexity 1 29 0 359 343 79 24 chr2 85732398 85732777 -164955077 + L1MEc LINE L1 3507 3906 -2309 1144 293 65 41 chr2 85732781 85733321 -164954533 - L1ME3A LINE L1 -15 6155 5603 315 349 35 30 chr2 85733561 85733793 -164954061 + HAL1b LINE L1 296 528 -820 874 287 36 14 chr2 85733794 85734212 -164953642 + L1M4 LINE L1 2303 2729 -3417 855 87 30 25 chr2 85734362 85734896 -164952958 + (TA)n Simple_repeat Simple_repeat 1 537 0 369 290 0 32 chr2 85735047 85735171 -164952683 - MLT1I LTR MaLR -177 232 113 22 70 0 0 chr2 85735215 85735258 -164952596 + AT_rich Low_complexity Low_complexity 1 43 0 389 77 0 0 chr2 85735456 85735508 -164952346 + L1M1 LINE L1 5651 5702 -601 480 301 42 69 chr2 85735700 85735905 -164951949 + MIR SINE MIR 2 200 -62 1911 100 4 8 chr2 85735905 85736165 -164951689 - AluSc SINE Alu -16 293 35 480 301 42 69 chr2 85736165 85736221 -164951633 + MIR SINE MIR 200 256 -6 2298 92 0 0 chr2 85736624 85736918 -164950936 + AluSg SINE Alu 1 294 -16 380 274 40 75 chr2 85737058 85737176 -164950678 + MIR SINE MIR 15 136 -126 606 28 0 0 chr2 85737176 85737248 -164950606 + (GGAA)n Simple_repeat Simple_repeat 3 74 0 1111 51 34 11 chr2 85737248 85737423 -164950431 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 380 274 40 75 chr2 85737423 85737529 -164950325 + MIR SINE MIR 134 232 -30 284 292 236 7 chr2 85738400 85738544 -164949310 - MER5B DNA MER1_type -1 177 1 258 286 14 14 chr2 85738574 85738644 -164949210 + MER5A DNA MER1_type 41 110 -79 3682 125 45 70 chr2 85739236 85739978 -164947876 + L1MA4A LINE L1 5267 5989 -314 739 310 81 8 chr2 85739978 85740239 -164947615 + MLT1E1 LTR MaLR 351 630 -24 3974 224 29 4 chr2 85740463 85742081 -164945773 + L1MB2 LINE L1 4517 6169 -2 21 36 0 0 chr2 85742620 85742648 -164945206 + AT_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr2 85743238 85743266 -164944588 + AT_rich Low_complexity Low_complexity 1 28 0 1815 164 43 20 chr2 85743412 85743808 -164944046 - L1MA8 LINE L1 -4 6287 5883 298 271 57 14 chr2 85743979 85744049 -164943805 + L2 LINE L2 3144 3216 -56 484 321 222 14 chr2 85744374 85744726 -164943128 - L2 LINE L2 0 3313 2889 928 220 40 0 chr2 85744732 85744932 -164942922 + L1PA16 LINE L1 5943 6150 -16 959 325 142 26 chr2 85744946 85745553 -164942301 - L2 LINE L2 -435 2879 2203 197 316 53 0 chr2 85745752 85745828 -164942026 - L3 LINE CR1 -586 991 912 21 0 0 0 chr2 85746024 85746045 -164941809 + AT_rich Low_complexity Low_complexity 1 21 0 5655 103 16 2 chr2 85746117 85746912 -164940942 + MER4D LTR ERV1 1 806 -66 270 330 58 21 chr2 85748357 85748548 -164939306 - ERVL LTR ERVL -392 5372 5175 201 147 0 0 chr2 85748548 85748582 -164939272 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 299 314 47 42 chr2 85748642 85748833 -164939021 - ERVL LTR ERVL -669 5095 4904 22 0 0 0 chr2 85748869 85748891 -164938963 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 85749229 85749257 -164938597 + AT_rich Low_complexity Low_complexity 1 28 0 425 311 147 0 chr2 85750085 85750275 -164937579 - MIR SINE MIR -8 254 37 654 253 35 25 chr2 85750369 85750571 -164937283 + L1M4 LINE L1 4057 4260 -1886 497 248 25 8 chr2 85750575 85750696 -164937158 + FLAM_C SINE Alu 6 128 -15 2754 245 40 27 chr2 85750806 85751519 -164936335 + L1M4 LINE L1 3369 4097 -2049 2370 77 0 0 chr2 85751519 85751817 -164936037 - AluY SINE Alu -13 298 1 2754 245 40 27 chr2 85751817 85751984 -164935870 + L1M4 LINE L1 4097 4260 -1886 1009 230 6 82 chr2 85751989 85752320 -164935534 + AluJo SINE Alu 7 312 0 941 205 59 21 chr2 85752327 85752615 -164935239 + L1M4 LINE L1 4243 4541 -1605 680 285 58 31 chr2 85752619 85753106 -164934748 - L1MEc LINE L1 -5224 1172 673 * 921 251 63 50 chr2 85753102 85753544 -164934310 - L1MB7 LINE L1 0 6184 5737 300 258 32 19 chr2 85753672 85753827 -164934027 + L1M4 LINE L1 2806 2962 -3184 * 423 260 16 0 chr2 85753816 85753939 -164933915 + L1M4 LINE L1 4643 4767 -1379 528 236 47 7 chr2 85753985 85754133 -164933721 + L1ME1 LINE L1 6012 6165 -1 180 176 0 0 chr2 85754368 85754402 -164933452 + (TA)n Simple_repeat Simple_repeat 2 35 0 412 359 119 9 chr2 85754521 85754841 -164933013 - MLT1K LTR MaLR -10 578 224 387 264 124 0 chr2 85754861 85754982 -164932872 + MER96 DNA MER1_type? 2 137 -38 2334 71 0 0 chr2 85755708 85756003 -164931851 - AluY SINE Alu -16 295 1 196 107 0 0 chr2 85756061 85756089 -164931765 + L3 LINE CR1 645 672 -905 385 287 61 9 chr2 85756117 85756232 -164931622 - MIR SINE MIR -21 241 121 729 347 126 21 chr2 85756232 85756906 -164930948 + L3 LINE CR1 759 1503 -74 389 365 23 28 chr2 85759610 85759845 -164928009 + MIR SINE MIR 21 252 -10 22 70 0 0 chr2 85760951 85760994 -164926860 + AT_rich Low_complexity Low_complexity 1 43 0 3751 57 12 0 chr2 85761471 85761966 -164925888 - L1PA5 LINE L1 -3630 2516 2016 21800 60 2 1 chr2 85761966 85765608 -164922246 + L1PA5 LINE L1 2521 6154 0 216 0 0 0 chr2 85765794 85765818 -164922036 + (TA)n Simple_repeat Simple_repeat 2 25 0 983 243 72 132 chr2 85768073 85768628 -164919226 - MLT1E LTR MaLR -14 579 58 418 210 49 0 chr2 85768806 85768968 -164918886 + (TA)n Simple_repeat Simple_repeat 1 170 0 271 288 24 72 chr2 85769289 85769414 -164918440 - MIR SINE MIR -65 143 25 2055 183 19 3 chr2 85769648 85770020 -164917834 - MER83B LTR ERV1 0 378 1 2086 175 9 0 chr2 85770023 85770361 -164917493 - MER83B-int LTR ERV1 -16 4864 4524 1034 200 24 103 chr2 85770437 85770735 -164917119 - MER83B-int LTR ERV1 -2870 3728 3477 1660 184 10 0 chr2 85770735 85771023 -164916831 - AluSx SINE Alu -21 291 1 1034 200 24 103 chr2 85771023 85771179 -164916675 - MER83B-int LTR ERV1 -3121 3477 3310 * 2891 142 11 2 chr2 85771175 85771641 -164916213 - MER83B-int LTR ERV1 -1185 3695 3226 14261 170 25 24 chr2 85771662 85775363 -164912491 - L1PA11 LINE L1 -12 7600 3882 61 15 0 0 chr2 85775363 85775431 -164912423 + AT_rich Low_complexity Low_complexity 1 68 0 6453 235 24 39 chr2 85775438 85778282 -164909572 - L1PA11 LINE L1 -3692 3892 1 6006 124 48 23 chr2 85778305 85779358 -164908496 - MER83B-int LTR ERV1 -1640 3240 2162 22 35 0 0 chr2 85829952 85829981 -164857873 + AT_rich Low_complexity Low_complexity 1 29 0 573 290 66 99 chr2 85830982 85831827 -164856027 - L1MEd LINE L1 -919 1571 668 276 294 71 57 chr2 85832112 85832394 -164855460 - L1MEd LINE L1 -5723 396 111 269 276 20 0 chr2 85832437 85832535 -164855319 + L1ME LINE L1 5709 5808 -313 754 242 0 0 chr2 85832888 85833070 -164854784 + AluJb SINE Alu 133 314 0 36 70 0 0 chr2 85833099 85833170 -164854684 + AT_rich Low_complexity Low_complexity 1 71 0 21 0 0 0 chr2 85833426 85833447 -164854407 + AT_rich Low_complexity Low_complexity 1 21 0 287 327 0 0 chr2 85833479 85833580 -164854274 - HAL1b LINE L1 -696 652 552 198 316 89 0 chr2 85833716 85833795 -164854059 - L2 LINE L2 -1 3312 3227 1725 185 46 9 chr2 85835305 85835629 -164852225 - MER2 DNA MER2_type -1 344 9 262 402 71 0 chr2 85835909 85836078 -164851776 - MIR SINE MIR -57 205 25 25 31 0 0 chr2 85836457 85836489 -164851365 + AT_rich Low_complexity Low_complexity 1 32 0 853 246 5 20 chr2 85837178 85837377 -164850477 - LTR40a LTR ERVL 0 519 324 213 94 0 0 chr2 85837931 85837963 -164849891 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1999 158 3 0 chr2 85839756 85840060 -164847794 + AluSx SINE Alu 1 305 -7 23 33 0 0 chr2 85840124 85840154 -164847700 + AT_rich Low_complexity Low_complexity 1 30 0 356 186 0 0 chr2 85840752 85840811 -164847043 - MER5A DNA MER1_type -3 186 128 2115 110 3 0 chr2 85840839 85841130 -164846724 - AluSc SINE Alu -17 292 1 2511 159 5 0 chr2 85841188 85841596 -164846258 + LTR1B LTR ERV1 417 826 0 453 302 96 31 chr2 85841684 85842333 -164845521 - L1M4 LINE L1 -2578 3568 2878 36 53 0 0 chr2 85842475 85842532 -164845322 + AT_rich Low_complexity Low_complexity 1 57 0 182 289 0 19 chr2 85843482 85843534 -164844320 + L3b LINE CR1 1232 1282 -301 275 221 46 53 chr2 85843743 85843874 -164843980 - L1MD3 LINE L1 -969 7026 6897 197 33 33 0 chr2 85843897 85843927 -164843927 + (TA)n Simple_repeat Simple_repeat 2 32 0 2321 91 52 3 chr2 85843985 85844348 -164843506 + L1MA1 LINE L1 5922 6302 0 3220 211 40 42 chr2 85844374 85845082 -164842772 - L1MC3 LINE L1 -25 8178 7471 6203 94 8 18 chr2 85845082 85845725 -164842129 - L1PA8A LINE L1 0 6131 5483 2084 131 0 10 chr2 85845725 85846037 -164841817 - AluSg SINE Alu -1 309 1 6203 94 8 18 chr2 85846037 85846748 -164841106 - L1PA8A LINE L1 -648 5483 4787 3220 211 40 42 chr2 85846748 85846922 -164840932 - L1MC3 LINE L1 -732 7471 7298 * 4845 256 60 22 chr2 85846918 85848829 -164839025 - L1MC3 LINE L1 -743 5821 4741 475 84 0 60 chr2 85848829 85848912 -164838942 - MADE1 DNA Mariner 0 80 3 4845 256 60 22 chr2 85848912 85850252 -164837602 - L1MC3 LINE L1 -1823 4741 3453 951 169 29 14 chr2 85850281 85850488 -164837366 - L1MA9 LINE L1 0 6312 6103 663 279 25 0 chr2 85850491 85850649 -164837205 + Tigger7 DNA MER2_type 10 171 -534 1553 134 4 8 chr2 85850650 85850911 -164836943 + Tigger7 DNA MER2_type 2309 2568 -19 4158 190 31 12 chr2 85850911 85852202 -164835652 - L1MA9 LINE L1 -206 6106 4776 1096 164 62 53 chr2 85852202 85852427 -164835427 - MER30 DNA MER1_type 0 230 4 4158 190 31 12 chr2 85852427 85852815 -164835039 - L1MA9 LINE L1 -1536 4776 4397 558 171 108 16 chr2 85852818 85852947 -164834907 - L1MC3 LINE L1 -4942 1622 1482 22 35 0 0 chr2 85852986 85853015 -164834839 + AT_rich Low_complexity Low_complexity 1 29 0 307 215 35 35 chr2 85853017 85853189 -164834665 + (TATAA)n Simple_repeat Simple_repeat 5 176 0 2217 237 63 130 chr2 85853229 85854523 -164833331 - L1MC3 LINE L1 -5201 1363 24 25 31 0 0 chr2 85854929 85854961 -164832893 + AT_rich Low_complexity Low_complexity 1 32 0 489 347 27 73 chr2 85855205 85855771 -164832083 + L2 LINE L2 2699 3235 -78 1652 232 40 44 chr2 85855985 85856516 -164831338 - LTR27 LTR ERV1 0 501 3 398 358 9 17 chr2 85856516 85856748 -164831106 + L2 LINE L2 118 347 -2967 1581 211 57 3 chr2 85856773 85857124 -164830730 - L1MB1 LINE L1 -138 6030 5661 250 354 21 0 chr2 85857130 85857226 -164830628 + L2 LINE L2 352 449 -2865 5950 141 54 73 chr2 85857245 85858419 -164829435 - MER4A-int LTR ERV1 -986 5612 4417 3997 47 0 0 chr2 85858419 85858909 -164828945 - L1PA5 LINE L1 -7 6147 5658 778 10 0 0 chr2 85858910 85859006 -164828848 + L1P LINE L1 2362 2457 -3689 5950 141 54 73 chr2 85859006 85859333 -164828521 - MER4A-int LTR ERV1 -2180 4418 3931 1806 77 98 31 chr2 85859339 85859626 -164828228 - MER4A-int LTR ERV1 -6292 306 1 1640 156 3 74 chr2 85859629 85860001 -164827853 - MER4A LTR ERV1 0 664 261 516 111 89 0 chr2 85860001 85860091 -164827763 - MER4A LTR ERV1 -566 98 1 376 325 0 39 chr2 85861076 85861230 -164826624 - MIR SINE MIR -70 192 45 196 339 70 72 chr2 85861313 85861700 -164826154 - L2 LINE L2 -338 2976 2591 2271 156 26 47 chr2 85862185 85862780 -164825074 - MER4E LTR ERV1 -2 764 1 25 75 0 0 chr2 85863979 85864032 -164823822 + AT_rich Low_complexity Low_complexity 1 53 0 249 331 107 6 chr2 85864782 85864951 -164822903 + MIR SINE MIR 73 258 -4 197 325 113 0 chr2 85864974 85865054 -164822800 + MIR SINE MIR 5 93 -169 22 0 0 0 chr2 85865776 85865798 -164822056 + AT_rich Low_complexity Low_complexity 1 22 0 1915 123 3 11 chr2 85865804 85866088 -164821766 + AluSx SINE Alu 1 282 -30 302 0 26 0 chr2 85866093 85866131 -164821723 + (TAA)n Simple_repeat Simple_repeat 2 40 0 241 236 0 0 chr2 85866262 85866317 -164821537 - MIR SINE MIR -62 200 146 1125 271 83 87 chr2 85866321 85866863 -164820991 - MLT1E LTR MaLR 0 593 3 2098 160 13 16 chr2 85867736 85868112 -164819742 + THE1C LTR MaLR 1 375 0 9073 119 43 49 chr2 85868112 85869702 -164818152 + THE1C-int LTR MaLR 1 1580 0 268 89 0 0 chr2 85869839 85869884 -164817970 + THE1C LTR MaLR 132 176 -199 * 1655 173 10 3 chr2 85869881 85870181 -164817673 + THE1C LTR MaLR 72 373 -2 21 0 0 0 chr2 85871053 85871074 -164816780 + AT_rich Low_complexity Low_complexity 1 21 0 36 19 0 19 chr2 85872023 85872044 -164815810 + AT_rich Low_complexity Low_complexity 1 21 -32 2154 101 0 7 chr2 85872044 85872341 -164815513 + AluSq SINE Alu 1 295 -18 36 19 0 19 chr2 85872341 85872373 -164815481 + AT_rich Low_complexity Low_complexity 21 53 0 1100 216 87 38 chr2 85872995 85873282 -164814572 - AluJb SINE Alu -1 301 1 22 0 0 0 chr2 85873434 85873456 -164814398 + AT_rich Low_complexity Low_complexity 1 22 0 490 163 143 0 chr2 85874280 85874378 -164813476 - MLT2A2 LTR ERVL -8 445 334 315 254 7 92 chr2 85875162 85875304 -164812550 - L1MC4 LINE L1 -17 8025 7896 312 316 53 40 chr2 85875363 85875515 -164812339 + L1ME LINE L1 5562 5715 -406 2433 135 3 8 chr2 85875693 85876070 -164811784 + THE1C LTR MaLR 1 375 0 4741 199 16 14 chr2 85877675 85878593 -164809261 + L1M1 LINE L1 106 1025 -6540 4892 105 25 3 chr2 85878593 85879346 -164808508 + L1MA2 LINE L1 5535 6304 0 26 64 0 0 chr2 85879354 85879401 -164808453 + AT_rich Low_complexity Low_complexity 1 47 0 425 242 15 30 chr2 85879775 85879907 -164807947 + AluJo SINE Alu 9 138 -174 1069 240 122 28 chr2 85879972 85880284 -164807570 + MER110A LTR ERV1 2 366 -102 1108 167 22 37 chr2 85880284 85880554 -164807300 + L1MA9 LINE L1 6047 6312 0 1069 240 122 28 chr2 85880554 85880666 -164807188 + MER110A LTR ERV1 366 466 -2 23 0 0 0 chr2 85880813 85880836 -164807018 + AT_rich Low_complexity Low_complexity 1 23 0 1579 217 68 44 chr2 85881627 85882129 -164805725 - L1MB7 LINE L1 -9 6175 5662 574 210 159 81 chr2 85882147 85882351 -164805503 - L1ME3A LINE L1 -2 6168 5927 2039 131 3 6 chr2 85882351 85882665 -164805189 - AluSp SINE Alu 0 313 1 574 210 159 81 chr2 85882665 85882793 -164805061 - L1ME3A LINE L1 -243 5927 5810 627 280 19 0 chr2 85882799 85882956 -164804898 + Charlie1 DNA MER1_type 1 160 -2601 634 235 0 0 chr2 85882986 85883122 -164804732 + Charlie1 DNA MER1_type 2622 2757 -4 602 226 59 39 chr2 85883131 85883312 -164804542 - L1ME3A LINE L1 -375 5795 5619 258 0 0 29 chr2 85883312 85883346 -164804508 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2069 106 0 11 chr2 85883346 85883629 -164804225 - AluSg SINE Alu -1 313 1 602 226 59 39 chr2 85883629 85883650 -164804204 - L1ME3A LINE L1 -550 5620 5588 493 200 45 0 chr2 85883692 85883804 -164804050 + MLT1A1 LTR MaLR 210 315 -50 619 256 52 14 chr2 85883808 85884019 -164803835 - L1ME3A LINE L1 -579 5585 5367 2719 185 31 9 chr2 85884051 85885525 -164802329 - L1MA9 LINE L1 0 6312 4768 443 164 31 0 chr2 85885534 85885634 -164802220 - L1MA9 LINE L1 -1821 4325 4217 458 140 90 0 chr2 85885656 85885756 -164802098 - L1MA9 LINE L1 -1821 4325 4217 * 2533 211 39 2 chr2 85885753 85886389 -164801465 - L1 LINE L1 -1379 6186 5527 600 178 83 25 chr2 85886389 85886546 -164801308 - LTR9 LTR ERV1 -1 611 446 443 194 0 65 chr2 85886562 85886670 -164801184 - LTR9 LTR ERV1 -315 297 197 812 177 11 43 chr2 85887040 85887226 -164800628 - LTR9 LTR ERV1 -432 180 1 1916 231 17 13 chr2 85887226 85887694 -164800160 - L1 LINE L1 -2034 5531 5062 1006 81 0 15 chr2 85887705 85887861 -164799993 - AluY SINE Alu 0 302 149 3270 254 51 34 chr2 85887865 85889018 -164798836 - L1 LINE L1 -2523 5042 3862 647 256 57 35 chr2 85889018 85889248 -164798606 - MER46A DNA MER2_type -1 235 1 3270 254 51 34 chr2 85889248 85889422 -164798432 - L1 LINE L1 -3703 3862 3692 2646 80 95 5 chr2 85889454 85889865 -164797989 - LTR7 LTR ERV1 -2 448 1 195 139 0 0 chr2 85889894 85889930 -164797924 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1706 149 61 0 chr2 85889931 85890192 -164797662 - AluSx SINE Alu -35 277 1 248 171 146 0 chr2 85890193 85890275 -164797579 - L1MA4 LINE L1 -46 6254 6161 * 2463 282 62 34 chr2 85890244 85891847 -164796007 - L1 LINE L1 -3858 3707 2060 4464 209 11 30 chr2 85891850 85892468 -164795386 - L1PA15 LINE L1 -4 6161 5532 270 0 0 0 chr2 85892468 85892498 -164795356 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 1511 160 4 0 chr2 85892498 85892748 -164795106 - AluSg SINE Alu -26 284 34 4464 209 11 30 chr2 85892748 85893688 -164794166 - L1PA15 LINE L1 -631 5534 4634 368 379 16 8 chr2 85893703 85893951 -164793903 - L1M2a LINE L1 -5178 1990 1741 329 197 127 0 chr2 85894059 85894130 -164793724 + pTR5 LTR ERV1 741 820 -1618 1293 81 212 242 chr2 85894145 85894612 -164793242 + LTR12 LTR ERV1 129 581 -133 2137 78 0 0 chr2 85895599 85895868 -164791986 - AluY SINE Alu -4 307 39 983 258 73 20 chr2 85895894 85896235 -164791619 - MLT1A1 LTR MaLR 0 365 7 22 0 0 0 chr2 85896255 85896277 -164791577 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 85897089 85897110 -164790744 + AT_rich Low_complexity Low_complexity 1 21 0 261 98 0 0 chr2 85898608 85898649 -164789205 + (GA)n Simple_repeat Simple_repeat 2 42 0 228 360 13 52 chr2 85899187 85899340 -164788514 - MIR SINE MIR -19 243 97 2315 167 21 14 chr2 85899645 85900064 -164787790 - MSTB LTR MaLR -4 422 1 206 266 13 13 chr2 85900377 85900456 -164787398 + (TA)n Simple_repeat Simple_repeat 1 79 0 263 331 55 44 chr2 85900762 85900943 -164786911 - MIR SINE MIR -31 231 49 198 103 0 0 chr2 85902248 85902277 -164785577 + (CA)n Simple_repeat Simple_repeat 2 30 0 316 342 9 18 chr2 85903355 85903469 -164784385 + L2 LINE L2 3146 3258 -14 378 121 0 0 chr2 85904284 85904350 -164783504 + (TC)n Simple_repeat Simple_repeat 2 67 0 216 111 0 0 chr2 85904350 85904386 -164783468 + (CA)n Simple_repeat Simple_repeat 1 36 0 2102 89 7 0 chr2 85905223 85905533 -164782321 - AluSp SINE Alu 0 312 1 236 273 91 73 chr2 85905874 85906039 -164781815 - MIR SINE MIR -42 220 53 2437 63 0 0 chr2 85907497 85907798 -164780056 + AluY SINE Alu 1 301 -10 21 36 0 0 chr2 85908510 85908538 -164779316 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 85908803 85908831 -164779023 + AT_rich Low_complexity Low_complexity 1 28 0 2281 151 32 41 chr2 85908919 85909356 -164778498 - Tigger2a DNA MER2_type 0 434 2 318 115 0 0 chr2 85912037 85912089 -164775765 + (CA)n Simple_repeat Simple_repeat 2 53 0 1240 170 137 37 chr2 85912111 85912381 -164775473 - AluJo SINE Alu -15 297 1 280 267 76 29 chr2 85912844 85912949 -164774905 - L2 LINE L2 -9 3304 3195 434 219 28 22 chr2 85913848 85914026 -164773828 + (TA)n Simple_repeat Simple_repeat 1 179 0 1689 262 53 50 chr2 85915647 85916246 -164771608 + MLT1E2 LTR MaLR 26 626 0 2020 118 10 35 chr2 85918607 85918921 -164768933 + AluSg SINE Alu 3 308 -2 502 137 0 20 chr2 85918931 85919033 -164768821 + (TA)n Simple_repeat Simple_repeat 2 101 0 364 314 99 99 chr2 85919033 85919316 -164768538 + MLT1I LTR MaLR 127 409 0 829 196 29 29 chr2 85919376 85919580 -164768274 - MER3 DNA MER1_type -1 208 5 267 313 39 47 chr2 85920450 85920578 -164767276 - L2 LINE L2 0 3313 3187 30 0 0 0 chr2 85921617 85921647 -164766207 + AT_rich Low_complexity Low_complexity 1 30 0 25 59 0 29 chr2 85922012 85922047 -164765807 + AT_rich Low_complexity Low_complexity 1 35 -31 1960 147 10 0 chr2 85922047 85922347 -164765507 + AluSq SINE Alu 1 303 -10 25 59 0 29 chr2 85922347 85922379 -164765475 + AT_rich Low_complexity Low_complexity 35 66 0 4180 212 76 4 chr2 85923677 85924357 -164763497 - L1 LINE L1 -1157 4989 4212 420 20 0 0 chr2 85924357 85924406 -164763448 + (TG)n Simple_repeat Simple_repeat 2 50 0 4180 212 76 4 chr2 85924406 85924728 -164763126 - L1 LINE L1 -1934 4212 3915 1630 166 23 15 chr2 85924713 85925235 -164762619 + L1MB1 LINE L1 5471 6164 -4 * 2136 162 29 7 chr2 85925503 85925923 -164761931 + L1MA5 LINE L1 5872 6300 0 38 68 0 0 chr2 85926171 85926244 -164761610 + AT_rich Low_complexity Low_complexity 1 73 0 228 111 0 0 chr2 85926393 85926429 -164761425 + (CA)n Simple_repeat Simple_repeat 2 37 0 2086 289 86 24 chr2 85926432 85927795 -164760059 - L1MC4 LINE L1 -92 7716 6336 23 54 0 0 chr2 85927910 85927947 -164759907 + AT_rich Low_complexity Low_complexity 1 37 0 360 325 16 36 chr2 85928171 85928365 -164759489 - L1MC4 LINE L1 -1911 5897 5708 2112 121 0 3 chr2 85928921 85929218 -164758636 + AluSg SINE Alu 1 296 -14 712 309 31 95 chr2 85929445 85930171 -164757683 + L2 LINE L2 2606 3275 -38 478 62 71 0 chr2 85930539 85930652 -164757202 + (TA)n Simple_repeat Simple_repeat 2 122 0 253 327 51 26 chr2 85931356 85931512 -164756342 - MLT1J1 LTR MaLR -264 182 23 1673 177 7 17 chr2 85932305 85932593 -164755261 + MER1B DNA MER1_type 55 339 0 645 268 96 5 chr2 85932597 85932806 -164755048 + L1ME1 LINE L1 5934 6161 -5 221 253 27 13 chr2 85933080 85933155 -164754699 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 192 77 0 0 chr2 85933842 85933868 -164753986 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 22 70 0 0 chr2 85934302 85934345 -164753509 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr2 85934857 85934879 -164752975 + AT_rich Low_complexity Low_complexity 1 22 0 2092 133 16 39 chr2 85935053 85935437 -164752417 + THE1C LTR MaLR 1 375 0 396 40 0 0 chr2 85935600 85935650 -164752204 + (TG)n Simple_repeat Simple_repeat 2 51 0 249 170 21 0 chr2 85935958 85936005 -164751849 + L2 LINE L2 3256 3303 -10 280 287 70 16 chr2 85936547 85936676 -164751178 + MERVL LTR ERVL 2093 2228 -3257 2277 309 87 33 chr2 85936701 85937106 -164750748 + L1MEc LINE L1 20 402 -5994 8460 115 11 22 chr2 85937106 85937172 -164750682 + HSMAR1 DNA Mariner 2 67 -1220 1983 128 7 0 chr2 85937172 85937460 -164750394 - AluSg SINE Alu -20 290 1 8460 115 11 22 chr2 85937460 85938692 -164749162 + HSMAR1 DNA Mariner 67 1287 0 2277 309 87 33 chr2 85938692 85939974 -164747880 + L1MEc LINE L1 402 1803 -4593 333 47 0 0 chr2 85939974 85940017 -164747837 + (TG)n Simple_repeat Simple_repeat 1 43 0 2277 309 87 33 chr2 85940017 85940048 -164747806 + L1MEc LINE L1 1803 1831 -4565 700 259 121 30 chr2 85940024 85940495 -164747359 + L1MEc LINE L1 2740 3253 -2962 * 13572 188 29 28 chr2 85940498 85943890 -164743964 + L1MA2 LINE L1 3356 6749 -816 5436 91 8 1 chr2 85943936 85944705 -164743149 - L1PA8A LINE L1 -28 6103 5330 2672 96 21 0 chr2 85944704 85945090 -164742764 + L1MA2 LINE L1 6735 7128 -595 * 2959 124 31 2 chr2 85945095 85945579 -164742275 + L1MA2 LINE L1 7226 7723 0 345 313 109 0 chr2 85945680 85945964 -164741890 + L1MEc LINE L1 3325 3639 -2576 3641 105 20 7 chr2 85945965 85946507 -164741347 + L1PA14 LINE L1 5536 6084 -77 182 359 0 0 chr2 85946697 85946750 -164741104 + MIR SINE MIR 200 252 -10 865 261 59 20 chr2 85946763 85947069 -164740785 + L1MEc LINE L1 3655 3972 -2243 341 327 76 63 chr2 85947792 85948107 -164739747 + MLT1I LTR MaLR 83 401 -8 188 143 24 0 chr2 85948213 85948255 -164739599 + A-rich Low_complexity Low_complexity 1 43 0 191 346 108 8 chr2 85948337 85948467 -164739387 - L2 LINE L2 -24 3289 3147 193 307 139 10 chr2 85949094 85949195 -164738659 + MIR SINE MIR 54 167 -95 3523 182 35 21 chr2 85949745 85950469 -164737385 - MER50 LTR ERV1 0 734 1 23 0 0 0 chr2 85950572 85950595 -164737259 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 85951408 85951429 -164736425 + AT_rich Low_complexity Low_complexity 1 21 0 600 286 42 9 chr2 85952091 85952308 -164735546 + HERVL LTR ERVL 1 224 -5430 2139 236 31 6 chr2 85952345 85953063 -164734791 + HERVL LTR ERVL 373 1181 -4583 22 35 0 0 chr2 85953372 85953401 -164734453 + AT_rich Low_complexity Low_complexity 1 29 0 267 175 48 29 chr2 85954104 85954207 -164733647 + (TTATA)n Simple_repeat Simple_repeat 5 109 0 23 33 0 0 chr2 85954260 85954290 -164733564 + AT_rich Low_complexity Low_complexity 1 30 0 4435 117 12 3 chr2 85954425 85955111 -164732743 - L1PA14 LINE L1 -6 6155 5464 1443 155 2 12 chr2 85955111 85955345 -164732509 + LTR39 LTR ERV1 562 783 0 295 175 63 0 chr2 85955413 85955476 -164732378 - L1ME LINE L1 -529 5592 5526 28 0 0 0 chr2 85955737 85955765 -164732089 + AT_rich Low_complexity Low_complexity 1 28 0 29 94 0 0 chr2 85956828 85956913 -164730941 + AT_rich Low_complexity Low_complexity 1 85 0 23 54 0 0 chr2 85957466 85957503 -164730351 + AT_rich Low_complexity Low_complexity 1 37 0 263 284 37 0 chr2 85957542 85957555 -164730299 - L1MA4A LINE L1 -8 6295 6283 837 298 0 0 chr2 85957555 85957773 -164730081 - L1PB4 LINE L1 -7 6149 5932 333 299 60 42 chr2 85958191 85958358 -164729496 + MIR SINE MIR 81 250 -12 2331 58 7 0 chr2 85958492 85958783 -164729071 + AluY SINE Alu 1 293 -18 1112 249 18 70 chr2 85958825 85959223 -164728631 + MLT1D LTR MaLR 116 492 -13 231 36 0 0 chr2 85959875 85959903 -164727951 + (CA)n Simple_repeat Simple_repeat 1 28 0 * 261 0 0 0 chr2 85959902 85959931 -164727923 + (GA)n Simple_repeat Simple_repeat 2 30 0 180 365 69 46 chr2 85960338 85960598 -164727256 + L2 LINE L2 2561 2826 -488 25 31 0 0 chr2 85960907 85960939 -164726915 + AT_rich Low_complexity Low_complexity 1 32 0 319 314 80 87 chr2 85961142 85961355 -164726499 - L3 LINE CR1 -15 1562 1352 1738 115 115 4 chr2 85961355 85961624 -164726230 - AluSx SINE Alu -13 299 1 319 314 80 87 chr2 85961624 85961811 -164726043 - L3 LINE CR1 -225 1352 1165 243 0 0 0 chr2 85963449 85963476 -164724378 + (CA)n Simple_repeat Simple_repeat 2 28 0 681 178 77 18 chr2 85963532 85963701 -164724153 + L1MA7 LINE L1 6110 6288 -3 2344 45 17 0 chr2 85964000 85964291 -164723563 + AluY SINE Alu 1 296 -15 251 265 147 24 chr2 85964915 85965085 -164722769 - L1M2 LINE L1 -786 5526 5336 28 0 0 0 chr2 85965328 85965356 -164722498 + AT_rich Low_complexity Low_complexity 1 28 0 337 291 75 48 chr2 85965397 85965624 -164722230 - L1M4 LINE L1 -2843 3303 3071 22 56 0 0 chr2 85966147 85966183 -164721671 + AT_rich Low_complexity Low_complexity 1 36 0 44 84 0 0 chr2 85966340 85966447 -164721407 + AT_rich Low_complexity Low_complexity 1 107 0 1395 209 3 60 chr2 85966544 85966891 -164720963 - AluJo SINE Alu 0 312 1 1373 231 40 3 chr2 85967097 85967418 -164720436 + MER97c DNA MER1_type? 269 601 -489 307 342 54 20 chr2 85967972 85968121 -164719733 - ERVL LTR ERVL -3502 2262 2109 558 216 85 103 chr2 85968142 85968227 -164719627 - MER34B LTR ERV1 -12 530 445 181 71 0 48 chr2 85968227 85968269 -164719585 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 558 216 85 103 chr2 85968269 85968405 -164719449 - MER34B LTR ERV1 -97 445 308 1075 195 49 113 chr2 85968405 85968795 -164719059 + MLT1A1 LTR MaLR 1 365 0 558 216 85 103 chr2 85968795 85969054 -164718800 - MER34B LTR ERV1 -234 308 12 1514 163 54 0 chr2 85970834 85971128 -164716726 + L1MA3 LINE L1 5988 6297 -8 302 344 23 8 chr2 85971398 85971529 -164716325 - LTR33 LTR ERVL -388 133 1 24 0 0 0 chr2 85971548 85971572 -164716282 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 85973781 85973802 -164714052 + AT_rich Low_complexity Low_complexity 1 21 0 342 323 137 16 chr2 85973995 85974360 -164713494 - L1MDa LINE L1 -4599 1941 1533 436 232 17 20 chr2 85974380 85974655 -164713199 + CT-rich Low_complexity Low_complexity 1 274 0 265 268 21 10 chr2 85974785 85974801 -164713053 - L1MA10 LINE L1 -2 6332 6317 828 267 130 47 chr2 85974801 85975092 -164712762 - L1ME2 LINE L1 -9 6155 5890 252 0 0 0 chr2 85975092 85975120 -164712734 + (TG)n Simple_repeat Simple_repeat 1 28 0 357 24 0 0 chr2 85975121 85975163 -164712691 + (TA)n Simple_repeat Simple_repeat 2 43 0 828 267 130 47 chr2 85975163 85975498 -164712356 - L1ME2 LINE L1 -273 5891 5465 200 216 0 0 chr2 85976090 85976127 -164711727 + (CATATA)n Simple_repeat Simple_repeat 5 41 0 25 31 0 0 chr2 85976127 85976159 -164711695 + AT_rich Low_complexity Low_complexity 1 32 0 201 94 0 0 chr2 85976159 85976191 -164711663 + (TA)n Simple_repeat Simple_repeat 1 32 0 292 240 27 0 chr2 85976229 85976304 -164711550 + L1MA9 LINE L1 6017 6093 -219 392 200 63 11 chr2 85976312 85976407 -164711447 + L1MA9 LINE L1 6156 6255 -57 31 58 0 0 chr2 85976431 85976483 -164711371 + AT_rich Low_complexity Low_complexity 1 52 0 346 290 24 6 chr2 85976996 85977165 -164710689 + (TA)n Simple_repeat Simple_repeat 2 173 0 596 265 59 51 chr2 85978625 85978738 -164709116 + MER57A LTR ERV1 1 112 -291 360 77 0 0 chr2 85978738 85978790 -164709064 + (TG)n Simple_repeat Simple_repeat 2 53 0 596 265 59 51 chr2 85978790 85979107 -164708747 + MER57A LTR ERV1 112 403 0 21 0 0 0 chr2 85979692 85979713 -164708141 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 85980609 85980645 -164707209 + AT_rich Low_complexity Low_complexity 1 36 0 2707 86 29 0 chr2 85981566 85981951 -164705903 - L1PA10 LINE L1 -3 6165 5770 1987 150 140 7 chr2 85982965 85983372 -164704482 - LOR1b LTR ERV1 0 461 1 199 162 0 29 chr2 85983474 85983542 -164704312 + (TA)n Simple_repeat Simple_repeat 2 67 0 36 87 0 0 chr2 85983548 85983640 -164704214 + AT_rich Low_complexity Low_complexity 1 92 0 1691 172 0 35 chr2 85984598 85984912 -164702942 - Tigger3(Golem) DNA MER2_type -5 3024 2722 383 210 0 0 chr2 85984910 85984972 -164702882 - Tigger3(Golem) DNA MER2_type -2947 82 21 * 311 282 47 0 chr2 85985954 85986039 -164701815 + L1MC4 LINE L1 6615 6703 -1339 * 318 283 0 22 chr2 85985963 85986055 -164701799 - L1MC4 LINE L1 -1339 6703 6614 437 182 0 27 chr2 85986056 85986166 -164701688 + (TA)n Simple_repeat Simple_repeat 2 108 0 21 36 0 0 chr2 85987272 85987300 -164700554 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 85987496 85987519 -164700335 + AT_rich Low_complexity Low_complexity 1 23 0 207 218 23 11 chr2 85987540 85987627 -164700227 + (TA)n Simple_repeat Simple_repeat 1 88 0 1702 258 78 60 chr2 85987800 85988556 -164699298 + ERVL-E LTR ERVL 4758 5527 -237 233 255 20 71 chr2 85988783 85988881 -164698973 + MLT2E LTR ERVL 30 122 -506 * 811 231 162 3 chr2 85988860 85989243 -164698611 + LTR28 LTR ERV1 542 1020 0 255 363 12 0 chr2 85989673 85989753 -164698101 + L2 LINE L2 3191 3271 -42 294 256 121 50 chr2 85989756 85989955 -164697899 - L2 LINE L2 -1 3312 3100 1137 180 51 37 chr2 85990047 85990413 -164697441 - Ricksha DNA DNA -13 3233 2922 454 200 84 0 chr2 85990416 85990511 -164697343 + AluJb SINE Alu 1 103 -209 2629 113 10 3 chr2 85990514 85990914 -164696940 - LTR22A LTR ERVK -4 454 3 1198 200 0 0 chr2 85990914 85991129 -164696725 + AluSp SINE Alu 95 309 -4 1768 201 48 2 chr2 85991129 85991523 -164696331 - Ricksha DNA DNA -320 2926 2515 664 251 68 0 chr2 85991570 85991733 -164696121 + FAM SINE Alu 2 175 0 1030 136 13 0 chr2 85992687 85992841 -164695013 + THE1B LTR MaLR 209 364 0 11136 109 8 2 chr2 85992841 85994413 -164693441 + THE1B-int LTR MaLR 1 1580 0 1887 188 17 11 chr2 85994413 85994775 -164693079 + THE1B LTR MaLR 1 364 0 195 139 0 0 chr2 85994819 85994855 -164692999 + (TA)n Simple_repeat Simple_repeat 1 36 0 850 239 23 26 chr2 85995645 85995909 -164691945 - L1ME LINE L1 -342 5824 5562 672 274 92 20 chr2 85995887 85996193 -164691661 + L1ME1 LINE L1 5789 6116 -50 * 2235 104 0 0 chr2 85996251 85996560 -164691294 - AluY SINE Alu -2 309 1 199 274 65 0 chr2 85996707 85996769 -164691085 + MIR SINE MIR 168 233 -29 239 240 0 0 chr2 85997913 85997963 -164689891 + T-rich Low_complexity Low_complexity 4 53 0 1460 228 13 39 chr2 85998302 85998684 -164689170 - MLT1A2 LTR MaLR 0 374 3 7050 192 131 30 chr2 85998927 86000520 -164687334 + MER52A LTR ERV1 3 1755 0 1962 108 0 0 chr2 86000918 86001178 -164686676 - AluSg SINE Alu 0 310 51 263 146 0 0 chr2 86001893 86001934 -164685920 - LTR30 LTR ERV1 -546 176 136 301 194 0 16 chr2 86002034 86002096 -164685758 - LTR30 LTR ERV1 -599 123 63 954 223 5 5 chr2 86002801 86003021 -164684833 - L1P LINE L1 -1036 5110 4891 * 4792 138 45 23 chr2 86003018 86003086 -164684768 + L1PA15 LINE L1 5278 5343 -822 2301 86 0 30 chr2 86003086 86003387 -164684467 - AluSp SINE Alu -17 296 5 4792 138 45 23 chr2 86003387 86004175 -164683679 + L1PA15 LINE L1 5343 6153 -12 1458 93 0 10 chr2 86004248 86004453 -164683401 - AluSp SINE Alu -10 303 101 1477 65 0 0 chr2 86006046 86006230 -164681624 - AluY SINE Alu -9 302 119 8972 36 5 2 chr2 86006231 86008102 -164679752 - L1PA4 LINE L1 -11 6144 4272 7441 123 9 81 chr2 86008102 86009006 -164678848 + L1P LINE L1 3364 4332 -1814 1080 75 0 0 chr2 86009006 86009140 -164678714 - AluY SINE Alu -177 134 1 7441 123 9 81 chr2 86009140 86009769 -164678085 + L1P LINE L1 4332 4745 -1401 1694 145 175 6 chr2 86009769 86010135 -164677719 - MSTA LTR MaLR 0 428 1 7441 123 9 81 chr2 86010135 86010464 -164677390 + L1P LINE L1 4745 5096 -1050 25 0 0 0 chr2 86010484 86010509 -164677345 + AT_rich Low_complexity Low_complexity 1 25 0 496 331 58 24 chr2 86011261 86011554 -164676300 - LTR16C LTR ERVL -18 473 171 354 255 208 65 chr2 86012262 86012478 -164675376 + L2 LINE L2 2882 3128 -185 55 40 0 0 chr2 86012535 86012611 -164675243 + AT_rich Low_complexity Low_complexity 1 76 0 593 252 22 0 chr2 86012613 86012752 -164675102 + L2 LINE L2 3171 3312 -1 2244 91 0 0 chr2 86014125 86014421 -164673433 - AluY SINE Alu -15 296 1 1639 152 4 11 chr2 86015036 86015350 -164672504 + AluSx SINE Alu 39 312 0 237 273 166 11 chr2 86015556 86015827 -164672027 + L1MC4a LINE L1 5712 6024 -1784 637 318 23 13 chr2 86016061 86016369 -164671485 + L1MCc LINE L1 129 439 -5984 2387 85 7 0 chr2 86016531 86016838 -164671016 + AluSg SINE Alu 1 309 -1 823 326 28 3 chr2 86016893 86017175 -164670679 + L1MCc LINE L1 786 1074 -5349 2099 167 90 53 chr2 86017220 86018266 -164669588 - SATR1 Satellite Satellite -1 1084 1 2197 160 104 11 chr2 86018296 86019201 -164668653 - SATR1 Satellite Satellite -2 988 1 404 237 0 40 chr2 86019202 86019379 -164668475 + (TAA)n Simple_repeat Simple_repeat 3 172 0 67 42 0 0 chr2 86019486 86019581 -164668273 + AT_rich Low_complexity Low_complexity 1 95 0 372 146 62 56 chr2 86019581 86019759 -164668095 + (TTAA)n Simple_repeat Simple_repeat 1 179 0 2192 190 112 27 chr2 86019929 86022534 -164665320 + SATR1 Satellite Satellite 1 2827 -85 24 67 0 0 chr2 86023025 86023070 -164664784 + AT_rich Low_complexity Low_complexity 1 45 0 387 333 138 25 chr2 86025110 86025557 -164662297 - L2 LINE L2 -231 3041 2543 348 251 120 46 chr2 86025655 86025830 -164662024 + L2 LINE L2 642 829 -2485 352 250 13 0 chr2 86026291 86026367 -164661487 - MER2 DNA MER2_type -1 344 268 1054 164 11 0 chr2 86026482 86026665 -164661189 - MER2 DNA MER2_type -160 185 1 263 315 68 73 chr2 86027139 86027656 -164660198 + L2 LINE L2 2030 2543 -771 189 0 0 0 chr2 86028272 86028293 -164659561 + (A)n Simple_repeat Simple_repeat 1 21 0 1722 196 36 3 chr2 86028666 86029003 -164658851 + MER7A DNA MER2_type 1 346 0 386 157 14 14 chr2 86029174 86029244 -164658610 - MER3 DNA MER1_type -131 78 9 602 218 98 11 chr2 86029260 86029434 -164658420 + MER5A DNA MER1_type 1 189 0 416 19 19 0 chr2 86029447 86029500 -164658354 + (TC)n Simple_repeat Simple_repeat 1 54 0 297 0 0 0 chr2 86029499 86029532 -164658322 + (CA)n Simple_repeat Simple_repeat 1 33 0 * 962 306 26 53 chr2 86029793 86030260 -164657594 - LTR16A1 LTR ERVL 0 457 4 4032 101 2 0 chr2 86031974 86032527 -164655327 - MER41A LTR ERV1 0 554 1 1079 216 80 55 chr2 86033171 86033295 -164654559 + MLT1A2 LTR MaLR 4 123 -251 2771 112 49 7 chr2 86033295 86033706 -164654148 - MSTA LTR MaLR 0 428 1 1079 216 80 55 chr2 86033706 86033943 -164653911 + MLT1A2 LTR MaLR 123 374 0 22 0 0 0 chr2 86034177 86034199 -164653655 + AT_rich Low_complexity Low_complexity 1 22 0 1200 236 43 46 chr2 86034968 86035023 -164652831 + Tigger5 DNA MER2_type 1 55 -2268 1679 138 43 87 chr2 86035023 86035415 -164652439 + THE1C LTR MaLR 1 375 0 1200 236 43 46 chr2 86035415 86035664 -164652190 + Tigger5 DNA MER2_type 55 304 -2019 392 234 0 0 chr2 86035659 86035736 -164652118 + Tigger5 DNA MER2_type 2247 2323 0 * 22 0 0 0 chr2 86036713 86036735 -164651119 + AT_rich Low_complexity Low_complexity 1 22 0 3912 173 12 0 chr2 86036949 86037668 -164650186 - L1PB4 LINE L1 -2 6154 5427 233 333 71 21 chr2 86038221 86038362 -164649492 - L1ME LINE L1 -490 5631 5484 26 0 0 0 chr2 86038441 86038467 -164649387 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 86038581 86038602 -164649252 + AT_rich Low_complexity Low_complexity 1 21 0 379 242 186 0 chr2 86038654 86038778 -164649076 + MER58B DNA MER1_type 167 313 -28 1401 188 104 13 chr2 86038778 86039087 -164648767 + MER1B DNA MER1_type 1 337 0 310 289 87 40 chr2 86039127 86039300 -164648554 - L1MDa LINE L1 -4414 2126 1946 1934 171 100 40 chr2 86039332 86039812 -164648042 - L1MC3 LINE L1 -8 7777 7269 4725 175 41 9 chr2 86039828 86040593 -164647261 - L1PB3 LINE L1 0 6154 5415 183 42 0 0 chr2 86040593 86040617 -164647237 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1925 92 0 4 chr2 86040617 86040877 -164646977 - AluSc SINE Alu -24 285 27 4725 175 41 9 chr2 86040877 86041324 -164646530 - L1PB3 LINE L1 -738 5416 4898 316 250 29 48 chr2 86041327 86041431 -164646423 - L1MC3 LINE L1 -535 7250 7149 261 211 0 0 chr2 86041431 86041483 -164646371 - MLT1F1 LTR MaLR -480 87 36 1399 220 22 35 chr2 86041485 86041889 -164645965 - L1MC3 LINE L1 -689 7096 6698 206 225 0 0 chr2 86041893 86041933 -164645921 + CT-rich Low_complexity Low_complexity 1 40 0 2081 123 3 0 chr2 86042032 86042333 -164645521 - AluSx SINE Alu -10 302 1 21 0 0 0 chr2 86042374 86042395 -164645459 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 86042420 86042448 -164645406 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 86043611 86043633 -164644221 + AT_rich Low_complexity Low_complexity 1 22 0 251 209 0 12 chr2 86044110 86044196 -164643658 + CT-rich Low_complexity Low_complexity 2 86 0 24 0 0 0 chr2 86045487 86045511 -164642343 + AT_rich Low_complexity Low_complexity 1 24 0 200 227 0 0 chr2 86046740 86046784 -164641070 + A-rich Low_complexity Low_complexity 1 44 0 33 43 0 0 chr2 86047061 86047108 -164640746 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr2 86047380 86047409 -164640445 + AT_rich Low_complexity Low_complexity 1 29 0 2165 94 6 50 chr2 86048283 86048602 -164639252 + AluSq SINE Alu 1 305 -8 1657 273 122 21 chr2 86048962 86050819 -164637035 + L1ME2 LINE L1 3804 5848 -316 425 369 21 21 chr2 86050926 86051162 -164636692 - L3 LINE CR1 -406 1171 936 2263 192 36 5 chr2 86051568 86052015 -164635839 + LOR1b LTR ERV1 1 461 0 1638 178 93 16 chr2 86052015 86052380 -164635474 + LOR1b-int LTR ERV1 1 393 -7727 4195 154 89 8 chr2 86052381 86053158 -164634696 + LOR1b-int LTR ERV1 203 1042 -7078 3597 136 37 29 chr2 86053150 86053799 -164634055 + LOR1b-int LTR ERV1 4871 5524 -2596 * 1684 112 20 0 chr2 86053798 86054049 -164633805 + LOR1b-int LTR ERV1 5809 6064 -2056 * 523 187 0 0 chr2 86054048 86054139 -164633715 + LOR1b-int LTR ERV1 8030 8120 0 * 2134 213 39 0 chr2 86054143 86054580 -164633274 + LOR1b LTR ERV1 8 461 0 974 136 6 2 chr2 86054855 86055029 -164632825 + pTR5 LTR ERV1 1481 1692 -746 244 33 0 0 chr2 86055032 86055062 -164632792 + MER4D LTR ERV1 874 903 0 1321 148 5 9 chr2 86056635 86056852 -164631002 + AluSg SINE Alu 1 216 -94 1572 262 116 16 chr2 86057604 86058173 -164629681 + MLT1E2 LTR MaLR 1 626 0 263 340 25 56 chr2 86058237 86058399 -164629455 - L2 LINE L2 -181 3091 2935 1988 201 41 7 chr2 86058894 86059312 -164628542 - MSTB1 LTR MaLR 0 432 1 21 0 0 0 chr2 86059772 86059793 -164628061 + AT_rich Low_complexity Low_complexity 1 21 0 396 145 0 0 chr2 86059812 86059881 -164627973 + L1PB4 LINE L1 6088 6156 0 284 308 21 14 chr2 86060018 86060161 -164627693 + L1M3c LINE L1 1225 1368 -4773 375 296 139 81 chr2 86060414 86060918 -164626936 + L1ME3 LINE L1 1424 1956 -4440 22 94 0 0 chr2 86061163 86061227 -164626627 + AT_rich Low_complexity Low_complexity 1 64 0 1107 277 69 48 chr2 86061236 86062008 -164625846 + L1ME3 LINE L1 2308 3095 -3120 2131 124 132 13 chr2 86062192 86062572 -164625282 + MSTA LTR MaLR 3 427 -1 1408 298 94 17 chr2 86062601 86063283 -164624571 + L1ME3 LINE L1 4256 4884 -1355 186 43 0 0 chr2 86063283 86063306 -164624548 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1408 298 94 17 chr2 86063306 86064096 -164623758 + L1ME3 LINE L1 4884 5842 -397 350 317 95 18 chr2 86064137 86064358 -164623496 + L1ME3 LINE L1 5947 6184 -47 431 173 29 39 chr2 86065094 86065198 -164622656 - L1M3 LINE L1 -631 5703 5601 392 130 14 0 chr2 86065198 86065267 -164622587 + CT-rich Low_complexity Low_complexity 2 71 0 1675 158 66 6 chr2 86065290 86065625 -164622229 - L1M3 LINE L1 -558 5610 5256 235 248 50 19 chr2 86065647 86065808 -164622046 + (TA)n Simple_repeat Simple_repeat 1 166 0 25 51 0 0 chr2 86065922 86065961 -164621893 + AT_rich Low_complexity Low_complexity 1 39 0 416 103 0 0 chr2 86065961 86066029 -164621825 - L1MA5 LINE L1 -17 6283 6216 237 297 0 30 chr2 86066333 86066434 -164621420 + CT-rich Low_complexity Low_complexity 2 99 0 45 19 0 0 chr2 86067661 86067713 -164620141 + AT_rich Low_complexity Low_complexity 1 52 0 917 181 0 0 chr2 86067915 86068064 -164619790 + FRAM SINE Alu 5 153 -23 1080 228 4 9 chr2 86068542 86068770 -164619084 - AluJo SINE Alu -23 289 63 259 335 77 22 chr2 86069276 86069458 -164618396 + L2 LINE L2 1794 1985 -1329 210 118 0 0 chr2 86070804 86070838 -164617016 + (TG)n Simple_repeat Simple_repeat 1 34 0 231 293 12 0 chr2 86072444 86072526 -164615328 - HAL1 LINE L1 -1016 1491 1409 396 0 0 0 chr2 86075168 86075212 -164612642 + (CA)n Simple_repeat Simple_repeat 1 44 0 23 0 0 0 chr2 86075692 86075715 -164612139 + AT_rich Low_complexity Low_complexity 1 23 0 237 178 0 0 chr2 86076084 86076129 -164611725 + (TA)n Simple_repeat Simple_repeat 2 46 0 495 202 21 0 chr2 86076479 86076573 -164611281 + Tigger5 DNA MER2_type 3 98 -2225 * 1292 123 100 0 chr2 86076565 86076785 -164611069 + Tigger5 DNA MER2_type 2081 2322 -1 21 71 0 0 chr2 86076966 86077008 -164610846 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr2 86077060 86077090 -164610764 + AT_rich Low_complexity Low_complexity 1 30 0 219 330 183 13 chr2 86077102 86077326 -164610528 - MIR SINE MIR 0 262 1 * 229 288 55 89 chr2 86077326 86077449 -164610405 - MIR SINE MIR -69 193 76 1245 219 123 47 chr2 86077474 86077921 -164609933 - MER74A LTR ERVL -10 548 68 32 43 0 0 chr2 86080010 86080056 -164607798 + AT_rich Low_complexity Low_complexity 1 46 0 1743 187 5 38 chr2 86080474 86080870 -164606984 - L1MB3 LINE L1 -1 6182 5800 10131 160 29 48 chr2 86080880 86083080 -164604774 - L1M4c LINE L1 -4027 2357 199 182 358 65 0 chr2 86083527 86083650 -164604204 + L2 LINE L2 3102 3232 -81 25 0 0 0 chr2 86084580 86084605 -164603249 + AT_rich Low_complexity Low_complexity 1 25 0 186 43 0 0 chr2 86085082 86085105 -164602749 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 2083 108 0 14 chr2 86086327 86086623 -164601231 - AluSg SINE Alu -18 292 1 397 292 156 21 chr2 86087102 86087294 -164600560 - MIR SINE MIR -43 219 2 228 273 114 45 chr2 86087844 86087932 -164599922 + L1MEd LINE L1 763 856 -5778 210 271 0 43 chr2 86088158 86088228 -164599626 + MIR SINE MIR 183 249 -13 1209 269 60 51 chr2 86088360 86089206 -164598648 + L1MEd LINE L1 1085 2092 -4733 22 35 0 0 chr2 86089645 86089674 -164598180 + AT_rich Low_complexity Low_complexity 1 29 0 1004 325 124 39 chr2 86089904 86090672 -164597182 - L2 LINE L2 -1799 1515 683 184 296 0 19 chr2 86091108 86091162 -164596692 - MIR SINE MIR -38 224 172 331 338 66 25 chr2 86092269 86092467 -164595387 - MIR SINE MIR -32 230 25 5615 27 0 0 chr2 86092834 86093490 -164594364 + L1PA3 LINE L1 5500 6155 0 2088 284 77 29 chr2 86094127 86095007 -164592847 + L1MCb LINE L1 1 838 -5726 2103 128 3 3 chr2 86095007 86095311 -164592543 - AluSq SINE Alu -9 304 1 2088 284 77 29 chr2 86095311 86096996 -164590858 + L1MCb LINE L1 838 2865 -3699 303 301 29 19 chr2 86097230 86097333 -164590521 - MLT1J LTR MaLR -330 181 78 1501 194 9 31 chr2 86097800 86098208 -164589646 - AluJb SINE Alu 0 401 1 1254 155 47 100 chr2 86098520 86098900 -164588954 + L1MA4A LINE L1 5939 6298 -5 6237 95 193 12 chr2 86099823 86100867 -164586987 + MER11B LTR ERVK 1 1232 -4 2119 257 9 9 chr2 86102022 86102601 -164585253 - L1 LINE L1 -989 5157 4579 962 198 29 37 chr2 86102585 86102859 -164584995 + L1 LINE L1 5142 5413 -743 * 2883 246 12 45 chr2 86103348 86104232 -164583622 - L1M3f LINE L1 -4114 1214 360 * 3355 206 37 29 chr2 86104227 86105856 -164581998 - L1MC1 LINE L1 -323 6010 4378 2252 112 0 3 chr2 86105966 86106280 -164581574 - AluSq SINE Alu 0 313 1 278 324 35 42 chr2 86106406 86106548 -164581306 + L2 LINE L2 3123 3263 -9 1946 121 0 10 chr2 86108250 86108540 -164579314 + AluY SINE Alu 1 287 -24 195 42 0 0 chr2 86108543 86108567 -164579287 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 285 241 34 66 chr2 86108723 86108737 -164579117 - L1P5 LINE L1 -675 5476 5463 2355 75 0 3 chr2 86108737 86109043 -164578811 + AluY SINE Alu 1 305 -6 285 241 34 66 chr2 86109043 86109216 -164578638 - L1P5 LINE L1 -688 5463 5295 364 269 33 6 chr2 86109719 86109901 -164577953 - L1M4 LINE L1 -1588 4558 4372 296 304 100 9 chr2 86109938 86110158 -164577696 - L1M4 LINE L1 -1897 4249 4010 1110 241 110 66 chr2 86110181 86110699 -164577155 + MLT1F LTR MaLR 2 542 0 503 280 143 28 chr2 86110763 86111195 -164576659 - L1M4 LINE L1 -2159 3987 3506 354 293 159 37 chr2 86111450 86111720 -164576134 - L1M4 LINE L1 -2947 3199 2897 319 289 108 35 chr2 86111771 86112031 -164575823 - L1M4 LINE L1 -3373 2773 2495 327 352 5 5 chr2 86112063 86112282 -164575572 - L1M4 LINE L1 -3656 2490 2272 1609 208 42 15 chr2 86114602 86115005 -164572849 + LTR52 LTR ERVL 8 421 0 545 348 60 45 chr2 86116478 86117037 -164570817 - L2 LINE L2 0 3313 2751 747 359 121 32 chr2 86117276 86118200 -164569654 - L2 LINE L2 -913 2401 1396 733 227 35 79 chr2 86118803 86118867 -164568987 + MER58A DNA MER1_type 2 67 -2353 2040 147 0 0 chr2 86118867 86119173 -164568681 - AluSq SINE Alu -7 306 1 733 227 35 79 chr2 86119173 86119337 -164568517 + MER58A DNA MER1_type 67 220 -4 48 53 0 0 chr2 86119516 86119592 -164568262 + AT_rich Low_complexity Low_complexity 1 76 0 261 0 0 0 chr2 86120496 86120525 -164567329 + (CA)n Simple_repeat Simple_repeat 2 30 0 195 204 0 0 chr2 86120528 86120572 -164567282 + (TA)n Simple_repeat Simple_repeat 2 45 0 1935 138 57 31 chr2 86120694 86121048 -164566806 + THE1B LTR MaLR 2 364 0 32 57 0 0 chr2 86121240 86121293 -164566561 + AT_rich Low_complexity Low_complexity 1 53 0 636 237 63 28 chr2 86121826 86122079 -164565775 - L1M4 LINE L1 -1584 4562 4301 22 0 0 0 chr2 86122512 86122534 -164565320 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 86122613 86122635 -164565219 + AT_rich Low_complexity Low_complexity 1 22 0 349 321 106 51 chr2 86123072 86123365 -164564489 - HAL1 LINE L1 -1322 1185 877 2196 200 88 77 chr2 86123456 86124272 -164563582 + LTR1B LTR ERV1 2 826 0 1076 256 60 66 chr2 86124462 86124915 -164562939 - L1MC4 LINE L1 -1132 6910 6461 1710 180 45 18 chr2 86125256 86125589 -164562265 + MER7A DNA MER2_type 6 345 -1 1576 188 79 9 chr2 86125634 86125963 -164561891 + MLT1A1 LTR MaLR 4 355 -10 924 118 97 36 chr2 86176012 86176207 -164511647 + THE1C LTR MaLR 143 349 -26 317 312 16 24 chr2 86176670 86176795 -164511059 + MER61D LTR ERV1 364 487 -14 3501 162 63 3 chr2 86176835 86177470 -164510384 + THE1-int LTR MaLR 1 673 -907 396 40 0 0 chr2 86177550 86177600 -164510254 + (TG)n Simple_repeat Simple_repeat 2 51 0 612 220 7 14 chr2 86177648 86177789 -164510065 - Tigger1 DNA MER2_type -1 2417 2278 257 279 34 28 chr2 86177962 86178229 -164509625 + MER34B LTR ERV1 278 566 -19 269 60 0 60 chr2 86178250 86178300 -164509554 - Tigger1 DNA MER2_type -149 2269 2223 2262 99 0 3 chr2 86178309 86178602 -164509252 + AluY SINE Alu 1 292 -19 19955 182 18 39 chr2 86178623 86183866 -164503988 + L1PA11 LINE L1 10 5125 -1364 1815 195 16 16 chr2 86183866 86184241 -164503613 - THE1C LTR MaLR 0 375 1 19955 182 18 39 chr2 86184241 86185578 -164502276 + L1PA11 LINE L1 5125 6489 0 703 245 83 34 chr2 86185594 86186363 -164501491 + L1MEc LINE L1 792 1635 -4761 * 919 204 30 30 chr2 86186360 86186625 -164501229 + L1MB8 LINE L1 5593 5857 -327 355 89 0 0 chr2 86186625 86186681 -164501173 - Alu SINE Alu 0 301 246 1584 175 15 24 chr2 86186683 86187020 -164500834 + L1MB8 LINE L1 5844 6177 -1 1040 225 27 0 chr2 86187087 86187309 -164500545 + AluJo SINE Alu 1 228 -84 10696 160 23 17 chr2 86187353 86189553 -164498301 - Tigger1 DNA MER2_type -186 2232 1 306 0 0 0 chr2 86189580 86189614 -164498240 + (GA)n Simple_repeat Simple_repeat 2 35 0 576 276 58 0 chr2 86191131 86191287 -164496567 - FRAM SINE Alu -11 165 1 333 218 55 18 chr2 86193044 86193154 -164494700 - L1MC3 LINE L1 -1563 6222 6109 213 154 0 0 chr2 86194007 86194046 -164493808 + (TG)n Simple_repeat Simple_repeat 2 40 0 634 278 87 48 chr2 86194343 86194722 -164493132 - LTR36 LTR ERV1 0 611 165 1304 132 6 0 chr2 86194722 86194904 -164492950 + AluSx SINE Alu 1 183 -129 222 37 0 0 chr2 86194933 86194960 -164492894 + (A)n Simple_repeat Simple_repeat 1 27 0 3039 176 79 46 chr2 86194985 86195745 -164492109 + LTR1 LTR ERV1 1 785 0 2019 92 0 0 chr2 86195874 86196150 -164491704 + AluSq SINE Alu 34 309 0 2332 90 0 3 chr2 86196150 86196460 -164491394 + AluSc SINE Alu 1 309 0 28 0 0 0 chr2 86196460 86196488 -164491366 + AT_rich Low_complexity Low_complexity 1 28 0 203 136 45 0 chr2 86196631 86196675 -164491179 + T-rich Low_complexity Low_complexity 2 47 0 1466 192 6 28 chr2 86198833 86199150 -164488704 + L1P LINE L1 4084 4393 -1753 7180 167 23 5 chr2 86200039 86201311 -164486543 - HSMAR2 DNA Mariner -2 1300 6 31 0 0 0 chr2 86201334 86201365 -164486489 + AT_rich Low_complexity Low_complexity 1 31 0 255 336 47 27 chr2 86201734 86201883 -164485971 - L2 LINE L2 -1144 2170 2019 327 264 55 85 chr2 86201907 86202108 -164485746 - MLT1J LTR MaLR -20 491 297 400 188 0 0 chr2 86203820 86203889 -164483965 - FRAM SINE Alu -75 101 33 343 359 48 15 chr2 86204973 86205179 -164482675 - MIR SINE MIR -38 224 12 21 0 0 0 chr2 86205662 86205683 -164482171 + AT_rich Low_complexity Low_complexity 1 21 0 1015 114 104 64 chr2 86206077 86206210 -164481644 + MER30 DNA MER1_type 2 149 -81 2197 98 13 16 chr2 86206210 86206517 -164481337 - AluSx SINE Alu -6 306 1 1015 114 104 64 chr2 86206517 86206603 -164481251 + MER30 DNA MER1_type 149 230 0 25 31 0 0 chr2 86206842 86206874 -164480980 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 86207145 86207174 -164480680 + AT_rich Low_complexity Low_complexity 1 29 0 1490 122 30 8 chr2 86207596 86207858 -164479996 + L1MA5A LINE L1 6027 6294 -3 24 32 0 0 chr2 86208274 86208305 -164479549 + AT_rich Low_complexity Low_complexity 1 31 0 25 65 0 0 chr2 86208460 86208506 -164479348 + AT_rich Low_complexity Low_complexity 1 46 0 23 68 0 0 chr2 86208650 86208694 -164479160 + AT_rich Low_complexity Low_complexity 1 44 0 326 319 69 22 chr2 86208734 86208966 -164478888 - L1 LINE L1 -3608 2538 2296 210 37 0 0 chr2 86210994 86211021 -164476833 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 27 51 0 17 chr2 86213015 86213052 -164474802 + AT_rich Low_complexity Low_complexity 1 38 -20 7084 55 0 3 chr2 86213052 86214387 -164473467 + L1PA7 LINE L1 4819 6152 -2 27 51 0 17 chr2 86214387 86214408 -164473446 + AT_rich Low_complexity Low_complexity 38 58 0 4239 257 76 41 chr2 86215314 86217266 -164470588 + L1MB7 LINE L1 27 2083 -4563 395 263 64 21 chr2 86217357 86217593 -164470261 + L1MB7 LINE L1 2290 2535 -4111 2331 73 3 19 chr2 86217611 86217926 -164469928 + AluY SINE Alu 1 310 -1 1761 262 40 40 chr2 86217955 86218683 -164469171 + L1MB7 LINE L1 4082 4809 -1835 * 2294 218 82 20 chr2 86218681 86219366 -164468488 + L1MB7 LINE L1 5940 6666 -16 394 297 31 0 chr2 86219513 86219641 -164468213 + MIR SINE MIR 79 210 -52 308 189 38 28 chr2 86220846 86220952 -164466902 + (TA)n Simple_repeat Simple_repeat 2 108 0 187 322 67 22 chr2 86221668 86221758 -164466096 - L2 LINE L2 -40 3273 3180 367 311 114 23 chr2 86222027 86222291 -164465563 - L3 LINE CR1 -156 1421 1134 192 352 28 0 chr2 86223051 86223122 -164464732 - MIR SINE MIR -61 147 75 274 277 114 0 chr2 86223478 86223644 -164464210 - L1ME3A LINE L1 0 6170 5986 511 351 59 16 chr2 86223656 86224222 -164463632 - L1MEc LINE L1 -2124 4258 3622 200 35 35 0 chr2 86224365 86224394 -164463460 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 323 224 67 55 chr2 86224499 86224664 -164463190 - L1MEc LINE L1 -3237 3145 2979 338 249 128 45 chr2 86224751 86224896 -164462958 - L1MEc LINE L1 -3567 2815 2683 1782 184 0 23 chr2 86224896 86225200 -164462654 - AluJb SINE Alu -15 297 1 338 249 128 45 chr2 86225200 86225343 -164462511 - L1MEc LINE L1 -3699 2683 2503 371 275 38 62 chr2 86225353 86225470 -164462384 - L1MEc LINE L1 -4098 2465 2354 2134 129 21 43 chr2 86225470 86225842 -164462012 - THE1B LTR MaLR 0 364 1 371 275 38 62 chr2 86225842 86225935 -164461919 - L1MEc LINE L1 -4209 2354 2260 289 281 130 17 chr2 86226310 86226541 -164461313 - L1MEc LINE L1 -4738 1646 1390 1484 259 28 20 chr2 86226596 86227102 -164460752 + L1ME1 LINE L1 5657 6166 0 23 54 0 0 chr2 86227198 86227235 -164460619 + AT_rich Low_complexity Low_complexity 1 37 0 1231 187 45 41 chr2 86229068 86229335 -164458519 + AluJb SINE Alu 22 289 -23 3329 217 43 3 chr2 86229413 86230186 -164457668 + L1MB1 LINE L1 4428 5231 -915 1986 130 41 0 chr2 86230207 86230500 -164457354 + AluSg SINE Alu 1 305 -5 238 250 0 0 chr2 86230515 86230563 -164457291 + L1MB1 LINE L1 5826 5873 -439 * 711 124 0 0 chr2 86230551 86230660 -164457194 + L1PBa LINE L1 2563 2731 -4131 1445 186 13 6 chr2 86230661 86230973 -164456881 + L1MB1 LINE L1 5854 6167 -1 277 422 35 0 chr2 86231931 86232104 -164455750 + MIR SINE MIR 47 225 -37 565 293 23 6 chr2 86232847 86233021 -164454833 + MER45A DNA AcHobo 2 178 0 326 218 55 45 chr2 86233636 86233746 -164454108 + MER94 DNA DNA 24 134 0 349 282 124 35 chr2 86235397 86235599 -164452255 - MLT1I LTR MaLR -150 259 40 351 323 83 53 chr2 86236139 86236670 -164451184 - L1MC4a LINE L1 -358 5812 5346 987 328 135 9 chr2 86236809 86237599 -164450255 - L2 LINE L2 -2 3311 2429 25 0 0 0 chr2 86237893 86237918 -164449936 + AT_rich Low_complexity Low_complexity 1 25 0 1788 154 23 7 chr2 86238220 86238519 -164449335 + AluJb SINE Alu 1 304 -8 231 261 31 0 chr2 86238589 86238654 -164449200 - MIR SINE MIR -84 178 112 23 54 0 0 chr2 86239063 86239100 -164448754 + AT_rich Low_complexity Low_complexity 1 37 0 1851 146 17 0 chr2 86240035 86240336 -164447518 + AluSx SINE Alu 1 306 -6 225 154 0 0 chr2 86242206 86242245 -164445609 + (TA)n Simple_repeat Simple_repeat 1 39 0 184 339 18 0 chr2 86243352 86243408 -164444446 - MIR SINE MIR -6 256 200 211 247 195 26 chr2 86243774 86243851 -164444003 - MIR SINE MIR -82 180 91 675 211 113 43 chr2 86245959 86246144 -164441710 - MER58C DNA MER1_type -8 207 10 394 221 186 98 chr2 86246273 86246558 -164441296 + LTR37A LTR ERV1 6 315 -111 234 302 79 0 chr2 86247336 86247399 -164440455 + MIR SINE MIR 1 68 -194 1640 238 54 5 chr2 86247405 86247867 -164439987 + MER89 LTR ERV1 13 559 0 3150 211 30 3 chr2 86248848 86249536 -164438318 + MER67C LTR ERV1 1 707 -3 191 254 0 68 chr2 86250128 86250187 -164437667 + L2 LINE L2 3206 3260 -12 296 282 26 58 chr2 86251074 86251230 -164436624 + MIR SINE MIR 54 204 -58 3591 39 0 0 chr2 86251882 86252316 -164435538 + L1PA5 LINE L1 5716 6149 -5 666 181 44 102 chr2 86252406 86252596 -164435258 - L1MC3 LINE L1 -1 7784 7607 1773 164 7 10 chr2 86252596 86252895 -164434959 - AluJb SINE Alu -14 298 1 666 181 44 102 chr2 86252895 86252930 -164434924 - L1MC3 LINE L1 -178 7607 7572 * 3444 212 46 27 chr2 86252929 86253809 -164434045 - L1MC3 LINE L1 -1445 6340 5440 2218 100 0 0 chr2 86253809 86254099 -164433755 - AluSc SINE Alu -19 290 1 3444 212 46 27 chr2 86254099 86254148 -164433706 - L1MC3 LINE L1 -2345 5440 5393 21 36 0 0 chr2 86254275 86254303 -164433551 + AT_rich Low_complexity Low_complexity 1 28 0 1070 227 66 68 chr2 86254338 86254704 -164433150 + MLT1A1 LTR MaLR 1 365 0 638 244 132 68 chr2 86256098 86256141 -164431713 + LTR37B LTR ERV1 2 41 -427 2071 105 3 33 chr2 86256141 86256446 -164431408 + AluSp SINE Alu 2 297 -16 638 244 132 68 chr2 86256446 86256841 -164431013 + LTR37B LTR ERV1 41 468 0 852 264 91 48 chr2 86257126 86257614 -164430240 + MER77 LTR ERV1 54 601 -4 1204 237 58 7 chr2 86257648 86257768 -164430086 + AluJo SINE Alu 5 118 -184 345 47 0 0 chr2 86257768 86257811 -164430043 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 1204 237 58 7 chr2 86257811 86257968 -164429886 + AluJo SINE Alu 118 296 -6 257 286 93 62 chr2 86258128 86258158 -164429696 - L1ME LINE L1 -345 5776 5748 1874 148 0 3 chr2 86258158 86258475 -164429379 - AluSx SINE Alu 0 316 1 257 286 93 62 chr2 86258475 86258865 -164428989 - L1ME LINE L1 -373 5748 5351 5032 51 0 7 chr2 86258916 86259905 -164427949 - L1PA5 LINE L1 -421 5734 4750 1511 73 9 1 chr2 86259904 86260117 -164427737 + L1PA5 LINE L1 5737 5955 -196 * 23 78 0 0 chr2 86260724 86260775 -164427079 + AT_rich Low_complexity Low_complexity 1 51 0 38 0 0 0 chr2 86261109 86261147 -164426707 + AT_rich Low_complexity Low_complexity 1 38 0 38 39 0 0 chr2 86261424 86261476 -164426378 + AT_rich Low_complexity Low_complexity 1 52 0 390 127 0 0 chr2 86261988 86262059 -164425795 + (TC)n Simple_repeat Simple_repeat 2 72 0 33 0 0 0 chr2 86262230 86262263 -164425591 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr2 86262456 86262484 -164425370 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 86263648 86263669 -164424185 + AT_rich Low_complexity Low_complexity 1 21 0 2565 37 0 0 chr2 86263929 86264227 -164423627 + AluY SINE Alu 1 298 -13 384 22 0 0 chr2 86264238 86264283 -164423571 + (CA)n Simple_repeat Simple_repeat 2 46 0 501 301 26 19 chr2 86264896 86265052 -164422802 + MER5B DNA MER1_type 2 158 -20 2287 186 93 13 chr2 86265183 86265720 -164422134 + L1MC3 LINE L1 6260 6333 -11 1898 159 10 0 chr2 86267360 86267668 -164420186 + AluJb SINE Alu 1 311 -1 642 324 19 0 chr2 86268984 86269197 -164418657 + LTR33 LTR ERVL 1 217 -304 413 277 0 0 chr2 86269205 86269324 -164418530 + LTR33 LTR ERVL 402 520 -1 2849 10 0 0 chr2 86270086 86270399 -164417455 + AluYb8 SINE Alu 1 313 -5 191 423 29 12 chr2 86270892 86271133 -164416721 - L3 LINE CR1 -42 1535 1291 281 287 106 0 chr2 86271838 86271932 -164415922 + MER94 DNA DNA 3 106 -28 26 0 0 0 chr2 86272045 86272071 -164415783 + AT_rich Low_complexity Low_complexity 1 26 0 2252 294 46 46 chr2 86272448 86273535 -164414319 - L1PA13 LINE L1 -5273 1514 1 528 310 138 4 chr2 86273572 86273804 -164414050 + LTR40a LTR ERVL 257 519 0 208 256 47 0 chr2 86274858 86274944 -164412910 + (TAAA)n Simple_repeat Simple_repeat 3 92 0 497 80 0 91 chr2 86275221 86275271 -164412583 - MADE1 DNA Mariner 0 80 40 2308 81 0 0 chr2 86275271 86275567 -164412287 + AluSc SINE Alu 4 299 -10 497 80 0 91 chr2 86275567 86275604 -164412250 - MADE1 DNA Mariner -40 40 1 348 281 7 7 chr2 86276267 86276402 -164411452 + (TA)n Simple_repeat Simple_repeat 2 136 0 31 58 0 0 chr2 86277659 86277711 -164410143 + AT_rich Low_complexity Low_complexity 1 52 0 180 242 0 30 chr2 86279192 86279291 -164408563 + CT-rich Low_complexity Low_complexity 2 97 0 22 35 0 0 chr2 86279704 86279733 -164408121 + AT_rich Low_complexity Low_complexity 1 29 0 723 184 48 7 chr2 86279843 86279990 -164407864 + MLT1A1 LTR MaLR 4 156 -209 642 149 79 0 chr2 86279990 86280104 -164407750 + AluSg/x SINE Alu 178 300 -12 625 249 15 51 chr2 86280110 86280307 -164407547 + MLT1A1 LTR MaLR 176 365 0 302 304 48 24 chr2 86280311 86280479 -164407375 - L1M4 LINE L1 -3777 2369 2198 4079 232 71 15 chr2 86280515 86280723 -164407131 - L1MC3 LINE L1 -8 7777 7582 240 35 0 0 chr2 86280723 86280752 -164407102 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4079 232 71 15 chr2 86280752 86281756 -164406098 - L1MC3 LINE L1 -203 7582 6497 263 232 12 0 chr2 86281827 86281909 -164405945 + CT-rich Low_complexity Low_complexity 4 86 0 384 348 27 37 chr2 86282046 86282342 -164405512 - L1MCa LINE L1 -3714 2712 2420 29 47 0 0 chr2 86282425 86282468 -164405386 + AT_rich Low_complexity Low_complexity 1 43 0 290 351 79 18 chr2 86282753 86282918 -164404936 + MIR SINE MIR 43 217 -45 261 276 36 24 chr2 86283154 86283322 -164404532 - L1MCa LINE L1 -867 1920 1601 343 321 24 30 chr2 86283430 86283598 -164404256 - L1MCa LINE L1 -5027 1389 1223 13550 167 12 8 chr2 86283620 86287002 -164400852 - L1PA12 LINE L1 0 6168 2782 4447 194 22 18 chr2 86287002 86287107 -164400747 + L1P LINE L1 1722 1825 -4321 2235 114 0 3 chr2 86287107 86287415 -164400439 - AluSq SINE Alu -3 310 4 4447 194 22 18 chr2 86287415 86288248 -164399606 + L1P LINE L1 1825 2664 -3482 563 0 15 0 chr2 86289463 86289530 -164398324 + (TTTTA)n Simple_repeat Simple_repeat 2 69 0 31 44 0 0 chr2 86290491 86290536 -164397318 + AT_rich Low_complexity Low_complexity 1 45 0 474 0 45 0 chr2 86291836 86291902 -164395952 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 1301 203 44 27 chr2 86291946 86292241 -164395613 + AluJo SINE Alu 1 300 -12 279 329 174 0 chr2 86292321 86292482 -164395372 - MIR SINE MIR 0 262 74 1790 170 55 27 chr2 86292661 86293026 -164394828 - THE1C LTR MaLR 0 375 1 26 50 0 0 chr2 86293490 86293530 -164394324 + AT_rich Low_complexity Low_complexity 1 40 0 2051 110 7 10 chr2 86293662 86293961 -164393893 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr2 86294454 86294476 -164393378 + AT_rich Low_complexity Low_complexity 1 22 0 390 269 19 10 chr2 86295328 86295432 -164392422 - MIR SINE MIR -46 216 112 1334 316 27 14 chr2 86295487 86296002 -164391852 + L1MEc LINE L1 49 570 -5826 718 216 54 27 chr2 86296012 86296234 -164391620 - MER96B DNA MER1_type? -12 405 178 787 270 156 9 chr2 86296253 86296347 -164391507 + L1MEc LINE L1 638 717 -5679 366 23 0 0 chr2 86296347 86296390 -164391464 + (CA)n Simple_repeat Simple_repeat 2 44 0 787 270 156 9 chr2 86296390 86296732 -164391122 + L1MEc LINE L1 717 1138 -5258 738 256 68 51 chr2 86296744 86298711 -164389143 + L1M4 LINE L1 2983 5058 -1088 868 206 47 30 chr2 86298723 86299095 -164388759 + MLT2B2 LTR ERVL 1 474 -46 273 125 0 0 chr2 86299365 86299421 -164388433 + (TA)n Simple_repeat Simple_repeat 2 57 0 1469 118 4 17 chr2 86299427 86299665 -164388189 - L1PB2 LINE L1 -3 6148 5914 387 0 0 0 chr2 86299666 86299709 -164388145 + (CA)n Simple_repeat Simple_repeat 2 44 0 27 0 0 0 chr2 86300485 86300512 -164387342 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr2 86300561 86300586 -164387268 + AT_rich Low_complexity Low_complexity 1 25 0 204 143 0 89 chr2 86300715 86300771 -164387083 + (TAAAAA)n Simple_repeat Simple_repeat 1 51 0 3774 94 20 20 chr2 86300789 86301343 -164386511 + MER41A LTR ERV1 1 554 0 22 35 0 0 chr2 86302634 86302663 -164385191 + AT_rich Low_complexity Low_complexity 1 29 0 1418 247 19 3 chr2 86302844 86303160 -164384694 + L1M3e LINE L1 7 327 -6703 7041 230 28 12 chr2 86303240 86305588 -164382266 + L1M3e LINE L1 1169 3473 -3633 2489 47 0 0 chr2 86305588 86305886 -164381968 + AluY SINE Alu 1 298 -13 7041 230 28 12 chr2 86305886 86307789 -164380065 + L1M3e LINE L1 3473 5345 -1761 1079 178 10 0 chr2 86307933 86308135 -164379719 + L1PB1 LINE L1 1 204 -6659 * 13250 212 25 14 chr2 86308128 86313450 -164374404 + L1PB1 LINE L1 1115 6507 -360 2234 127 11 24 chr2 86313490 86313861 -164373993 + L1PB1 LINE L1 6500 6865 -2 2989 201 28 5 chr2 86313888 86314559 -164373295 + L1M3e LINE L1 5319 6005 -1101 988 182 11 11 chr2 86314570 86314751 -164373103 + AluJo SINE Alu 3 183 -129 922 201 18 14 chr2 86314751 86314970 -164372884 + L1M3e LINE L1 6008 6227 -879 729 192 0 0 chr2 86314979 86315099 -164372755 + AluSq/x SINE Alu 1 120 -192 31 44 0 0 chr2 86315099 86315144 -164372710 + AT_rich Low_complexity Low_complexity 1 45 0 370 117 88 0 chr2 86315144 86315281 -164372573 + (TATAA)n Simple_repeat Simple_repeat 5 153 0 490 215 8 8 chr2 86315281 86315411 -164372443 + L1 LINE L1 4273 4402 -1744 892 260 41 21 chr2 86316111 86316353 -164371501 + MER45C DNA AcHobo 707 953 0 484 282 147 8 chr2 86316623 86316868 -164370986 + LTR16C LTR ERVL 178 456 -35 1684 336 26 31 chr2 86317053 86318262 -164369592 + HERVI LTR ERV1 5324 7647 -128 2876 209 13 76 chr2 86319066 86319844 -164368010 - L1MC3 LINE L1 -7 7778 7050 469 143 84 25 chr2 86319934 86320008 -164367846 - L1MC3 LINE L1 -780 7005 6937 189 0 0 0 chr2 86320008 86320029 -164367825 + (TTA)n Simple_repeat Simple_repeat 1 21 0 469 143 84 25 chr2 86320029 86320133 -164367721 - L1MC3 LINE L1 -848 6937 6762 286 340 41 52 chr2 86321797 86321991 -164365863 + L2 LINE L2 3118 3309 -4 2133 99 0 20 chr2 86322125 86322419 -164365435 + AluSg SINE Alu 1 288 -22 216 362 80 36 chr2 86322461 86322599 -164365255 - L2 LINE L2 -4 3268 3125 2534 171 5 0 chr2 86322712 86323138 -164364716 - MSTA LTR MaLR 0 428 1 207 0 0 0 chr2 86323319 86323342 -164364512 + (TG)n Simple_repeat Simple_repeat 2 24 0 398 172 8 25 chr2 86323368 86323490 -164364364 + (TA)n Simple_repeat Simple_repeat 1 120 0 1977 123 20 0 chr2 86323631 86323923 -164363931 - AluSg SINE Alu -12 298 1 278 140 35 0 chr2 86324842 86324899 -164362955 + GA-rich Low_complexity Low_complexity 3 61 0 33 25 0 0 chr2 86325012 86325052 -164362802 + AT_rich Low_complexity Low_complexity 1 40 0 22 80 0 0 chr2 86325216 86325266 -164362588 + AT_rich Low_complexity Low_complexity 1 50 0 244 167 104 0 chr2 86325584 86325632 -164362222 - L1PB4 LINE L1 -1521 4625 4573 4381 190 21 29 chr2 86325632 86327162 -164360692 + L1PB4 LINE L1 4636 6154 -2 1642 202 159 147 chr2 86328638 86329439 -164358415 - LTR28 LTR ERV1 0 1020 17 355 278 77 10 chr2 86329870 86330064 -164357790 + L1M4 LINE L1 4387 4593 -1553 455 248 13 45 chr2 86330149 86330306 -164357548 - L1MA10 LINE L1 -3 6331 6180 195 281 27 75 chr2 86330369 86330515 -164357339 + MIR SINE MIR 124 262 0 2103 165 34 26 chr2 86330884 86331302 -164356552 + MSTB1 LTR MaLR 12 432 0 180 241 0 0 chr2 86333356 86333414 -164354440 + (TA)n Simple_repeat Simple_repeat 2 59 0 25 102 0 0 chr2 86333549 86333637 -164354217 + AT_rich Low_complexity Low_complexity 1 88 0 203 377 58 14 chr2 86334254 86334392 -164353462 - L3 LINE CR1 -178 1399 1256 270 349 125 19 chr2 86334555 86334819 -164353035 - L3 LINE CR1 -566 1011 720 1104 224 70 54 chr2 86334820 86335133 -164352721 + MER2 DNA MER2_type 25 342 -3 1317 180 130 89 chr2 86335723 86336183 -164351671 - MER101B LTR ERV1 -31 519 71 1641 186 82 88 chr2 86336388 86336936 -164350918 - LTR49 LTR ERV1 -49 546 2 2627 120 20 50 chr2 86336957 86337013 -164350841 - MSTA LTR MaLR 0 428 372 2118 99 4 0 chr2 86337013 86337317 -164350537 - AluSp SINE Alu 0 313 9 2627 120 20 50 chr2 86337317 86337700 -164350154 - MSTA LTR MaLR -56 372 1 4714 79 33 0 chr2 86337840 86338470 -164349384 - PABL_A LTR ERV1 -9 651 1 36 53 0 0 chr2 86338676 86338733 -164349121 + AT_rich Low_complexity Low_complexity 1 57 0 536 0 16 0 chr2 86339349 86339413 -164348441 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 4412 183 12 39 chr2 86340840 86341643 -164346211 + L1PA13 LINE L1 1 782 -6799 721 310 113 14 chr2 86341650 86342014 -164345840 + L1PA13 LINE L1 1644 2043 -5531 12534 202 10 32 chr2 86342019 86344330 -164343524 + L1PA13 LINE L1 2183 4390 -3194 508 103 0 0 chr2 86344330 86344408 -164343446 - L1PA3 LINE L1 -5 6150 6073 12534 202 10 32 chr2 86344408 86345561 -164342293 + L1PA13 LINE L1 4390 5567 -2017 5644 105 36 6 chr2 86345564 86346891 -164340963 + L1PA13 LINE L1 6242 7601 0 347 286 266 5 chr2 86347023 86347222 -164340632 - MIR SINE MIR -1 261 11 264 30 0 0 chr2 86347332 86347365 -164340489 + (TG)n Simple_repeat Simple_repeat 2 34 0 2319 180 59 42 chr2 86347393 86347970 -164339884 + L1MA8 LINE L1 5705 6291 0 26 50 0 0 chr2 86348604 86348644 -164339210 + AT_rich Low_complexity Low_complexity 1 40 0 2114 134 0 0 chr2 86348781 86349087 -164338767 + AluSq SINE Alu 1 306 -7 241 252 84 28 chr2 86349525 86349632 -164338222 + MLT1L LTR MaLR 496 608 -7 366 23 0 0 chr2 86350045 86350088 -164337766 + U2 snRNA snRNA 12 54 -134 21 36 0 0 chr2 86350165 86350193 -164337661 + AT_rich Low_complexity Low_complexity 1 28 0 575 168 7 40 chr2 86350642 86350791 -164337063 + L1MA9 LINE L1 6163 6306 -6 261 329 0 0 chr2 86358568 86358653 -164329201 + (CA)n Simple_repeat Simple_repeat 2 86 0 607 148 49 0 chr2 86359085 86359227 -164328627 + CT-rich Low_complexity Low_complexity 4 152 0 2219 85 0 35 chr2 86360074 86360392 -164327462 - AluY SINE Alu -2 309 3 24 0 0 0 chr2 86360547 86360571 -164327283 + AT_rich Low_complexity Low_complexity 1 24 0 1333 207 3 57 chr2 86360789 86361088 -164326766 + AluJo SINE Alu 9 291 -21 397 315 112 79 chr2 86364548 86364976 -164322878 - L2 LINE L2 -571 2743 2302 218 369 71 15 chr2 86366542 86366740 -164321114 + MIR SINE MIR 54 262 0 28 95 0 0 chr2 86366926 86367010 -164320844 + AT_rich Low_complexity Low_complexity 1 84 0 255 348 87 38 chr2 86368237 86368421 -164319433 - MIR3 SINE MIR -1 207 15 355 328 82 8 chr2 86369056 86369190 -164318664 - L2 LINE L2 -3 3269 3126 2148 135 0 0 chr2 86372132 86372444 -164315410 + AluSx SINE Alu 1 312 0 2675 13 3 16 chr2 86372557 86372872 -164314982 + AluY SINE Alu 1 311 0 239 224 0 0 chr2 86374181 86374230 -164313624 + (CA)n Simple_repeat Simple_repeat 2 50 0 2137 152 44 2 chr2 86374412 86374821 -164313033 - L1MA5A LINE L1 -6 6291 5866 2428 181 52 14 chr2 86374821 86375593 -164312261 - L1MA5A LINE L1 -743 5403 4741 21 36 0 0 chr2 86375839 86375867 -164311987 + AT_rich Low_complexity Low_complexity 1 28 0 187 312 151 11 chr2 86376010 86376103 -164311751 - L2 LINE L2 0 3313 3208 252 273 193 34 chr2 86376767 86376943 -164310911 - MIR SINE MIR -8 254 51 204 40 0 0 chr2 86377586 86377611 -164310243 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 2064 107 7 7 chr2 86377756 86378055 -164309799 + AluY SINE Alu 1 299 -12 4277 50 5 3 chr2 86378064 86378633 -164309221 - L1P LINE L1 -804 5347 4776 * 7644 7 0 0 chr2 86378627 86379493 -164308361 + L1HS LINE L1 5290 6155 0 21 0 0 0 chr2 86380546 86380567 -164307287 + AT_rich Low_complexity Low_complexity 1 21 0 269 123 0 35 chr2 86381896 86381953 -164305901 + (TATG)n Simple_repeat Simple_repeat 2 56 0 455 304 125 32 chr2 86382702 86383014 -164304840 + MLT1J LTR MaLR 37 377 -134 30 45 0 0 chr2 86383500 86383544 -164304310 + AT_rich Low_complexity Low_complexity 1 44 0 1005 173 84 0 chr2 86383929 86384154 -164303700 + L1MA5A LINE L1 6053 6296 -1 2147 221 58 19 chr2 86384264 86384781 -164303073 - MER54A LTR ERVL -2 899 363 216 0 0 0 chr2 86384790 86384814 -164303040 + (GA)n Simple_repeat Simple_repeat 1 24 0 256 320 0 0 chr2 86384874 86384949 -164302905 + MER45 DNA AcHobo 6 80 -98 292 261 0 0 chr2 86384950 86385015 -164302839 + MER45 DNA AcHobo 1517 1581 0 1870 127 0 77 chr2 86385035 86385401 -164302453 + AluSx SINE Alu 1 340 0 627 136 13 136 chr2 86386662 86386817 -164301037 - MSTD LTR MaLR 0 396 261 948 91 30 0 chr2 86386818 86386950 -164300904 - AluSc SINE Alu -38 271 136 24 32 0 0 chr2 86387745 86387776 -164300078 + AT_rich Low_complexity Low_complexity 1 31 0 264 335 68 25 chr2 86387845 86388006 -164299848 + MIR SINE MIR 28 195 -67 420 197 8 15 chr2 86388278 86388410 -164299444 + (TA)n Simple_repeat Simple_repeat 1 131 0 15642 107 10 30 chr2 86389206 86389853 -164298001 - Charlie3 DNA MER1_type 0 2706 2047 2104 78 59 0 chr2 86389853 86390124 -164297730 - AluSg SINE Alu -19 291 5 15642 107 10 30 chr2 86390124 86391804 -164296050 - Charlie3 DNA MER1_type -659 2047 427 673 142 53 18 chr2 86391810 86391923 -164295931 - Charlie3 DNA MER1_type -1766 944 828 * 3104 137 20 0 chr2 86391904 86392358 -164295496 - Charlie3 DNA MER1_type -2247 463 1 243 339 85 18 chr2 86392436 86392744 -164295110 + L2 LINE L2 2734 3061 -211 1110 250 0 17 chr2 86392939 86393231 -164294623 + L1MB8 LINE L1 5879 6165 -13 274 298 102 67 chr2 86393504 86393789 -164294065 + LTR16A1 LTR ERVL 161 455 -2 620 243 73 0 chr2 86394007 86394143 -164293711 + FRAM SINE Alu 1 146 -30 225 0 0 0 chr2 86394146 86394171 -164293683 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 227 277 157 0 chr2 86394321 86394404 -164293450 + L2 LINE L2 3208 3303 -10 228 130 0 0 chr2 86394726 86394772 -164293082 + (TTG)n Simple_repeat Simple_repeat 3 48 0 1178 148 23 0 chr2 86394930 86395147 -164292707 + L1MA5A LINE L1 6076 6297 0 304 299 85 17 chr2 86396079 86396256 -164291598 + L1ME LINE L1 5577 5765 -356 1689 175 7 3 chr2 86396658 86396950 -164290904 - AluSq SINE Alu -19 294 2 385 267 144 7 chr2 86397033 86397179 -164290675 - L2 LINE L2 -668 2646 2481 1542 168 62 0 chr2 86397241 86397515 -164290339 + AluJb SINE Alu 1 291 -21 936 203 68 4 chr2 86397518 86397755 -164290099 + HAL1 LINE L1 1530 1781 -726 589 231 8 0 chr2 86397813 86397934 -164289920 + FLAM_A SINE Alu 1 122 -11 688 244 167 6 chr2 86398021 86398369 -164289485 + HAL1 LINE L1 2032 2435 -72 308 270 202 22 chr2 86398429 86398607 -164289247 + HAL1 LINE L1 2296 2505 -2 24 0 0 0 chr2 86398637 86398661 -164289193 + AT_rich Low_complexity Low_complexity 1 24 0 359 333 7 13 chr2 86399397 86399547 -164288307 + CT-rich Low_complexity Low_complexity 2 150 0 220 228 13 13 chr2 86399560 86399639 -164288215 + CT-rich Low_complexity Low_complexity 4 82 0 978 176 26 10 chr2 86399721 86399914 -164287940 + AluJo SINE Alu 104 299 -13 331 273 61 0 chr2 86400680 86400779 -164287075 - MER5A DNA MER1_type -76 113 9 1950 144 10 3 chr2 86400873 86401172 -164286682 - AluSx SINE Alu -7 305 5 22 0 0 0 chr2 86401220 86401242 -164286612 + AT_rich Low_complexity Low_complexity 1 22 0 223 345 136 0 chr2 86401581 86401691 -164286163 + L2 LINE L2 3141 3265 -7 284 242 8 40 chr2 86401838 86401962 -164285892 + (TCTA)n Simple_repeat Simple_repeat 3 122 0 188 272 43 136 chr2 86403643 86403805 -164284049 - L2 LINE L2 0 3313 3167 305 42 0 42 chr2 86404556 86404604 -164283250 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 1520 249 32 34 chr2 86405425 86405891 -164281963 - MLT1C LTR MaLR 0 467 3 189 0 0 0 chr2 86405917 86405938 -164281916 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 3271 235 118 45 chr2 86405939 86407028 -164280826 - MLT1C-int LTR MaLR -26 1345 110 2145 137 3 0 chr2 86407028 86407335 -164280519 - AluSx SINE Alu -4 308 1 3271 235 118 45 chr2 86407335 86407454 -164280400 - MLT1C-int LTR MaLR -1261 110 1 1381 251 78 19 chr2 86407454 86407864 -164279990 - MLT1C LTR MaLR 0 467 34 352 96 19 0 chr2 86407880 86407932 -164279922 - MSTA LTR MaLR 0 428 376 2113 208 0 3 chr2 86407943 86408328 -164279526 - MST-int LTR MaLR -175 1476 1093 1887 135 10 0 chr2 86408325 86408622 -164279232 - MSTA-int LTR MaLR -1278 302 3 * 456 149 0 0 chr2 86408624 86408698 -164279156 - MSTA LTR MaLR 0 428 355 2017 30 0 0 chr2 86408705 86408941 -164278913 + L1PA5 LINE L1 5912 6147 -7 1875 168 48 6 chr2 86408966 86409323 -164278531 - MSTA LTR MaLR -56 372 1 9968 238 70 12 chr2 86409370 86413554 -164274300 - L1P5 LINE L1 -465 6405 1931 492 240 62 0 chr2 86413537 86413683 -164274171 + L1MA7 LINE L1 6136 6290 -1 * 6792 225 35 54 chr2 86413691 86416680 -164271174 + L1PA11 LINE L1 1 2914 -3547 15013 170 57 9 chr2 86416680 86420286 -164267568 + L1PA11 LINE L1 2842 6487 -2 31 82 0 0 chr2 86420286 86420359 -164267495 + AT_rich Low_complexity Low_complexity 1 73 0 36 0 0 0 chr2 86420475 86420511 -164267343 + AT_rich Low_complexity Low_complexity 1 36 0 2309 220 32 6 chr2 86420576 86421072 -164266782 + LTR53 LTR ERVL 1 509 -10 441 278 75 8 chr2 86421110 86421243 -164266611 + MER97c DNA MER1_type? 3 144 -946 5145 66 3 0 chr2 86421767 86422431 -164265423 + L1PA8 LINE L1 5493 6158 -14 1734 164 52 33 chr2 86424875 86425242 -164262612 + THE1C LTR MaLR 2 375 0 1674 125 6 120 chr2 86425609 86425795 -164262059 - AluJb SINE Alu -1 311 105 324 0 0 0 chr2 86425795 86425831 -164262023 + (CA)n Simple_repeat Simple_repeat 2 37 0 1674 125 6 120 chr2 86425831 86425855 -164261999 - AluJb SINE Alu -207 105 80 234 0 0 0 chr2 86425855 86425881 -164261973 + (TA)n Simple_repeat Simple_repeat 2 27 0 1674 125 6 120 chr2 86425881 86426020 -164261834 - AluJb SINE Alu -232 80 1 623 226 0 15 chr2 86427021 86427158 -164260696 - MIR SINE MIR 0 262 128 262 379 46 31 chr2 86427675 86427936 -164259918 + L2 LINE L2 3003 3267 -5 192 152 0 0 chr2 86429498 86429531 -164258323 + (CA)n Simple_repeat Simple_repeat 2 34 0 202 398 20 20 chr2 86429600 86429698 -164258156 + MIR SINE MIR 21 118 -90 28 29 0 0 chr2 86429946 86429981 -164257873 + AT_rich Low_complexity Low_complexity 1 35 0 1960 157 3 3 chr2 86429990 86430296 -164257558 + AluSx SINE Alu 1 306 -6 27 62 0 0 chr2 86430605 86430653 -164257201 + AT_rich Low_complexity Low_complexity 1 48 0 345 278 80 85 chr2 86430678 86431114 -164256740 - HAL1b LINE L1 -509 839 406 1742 184 0 7 chr2 86431806 86432111 -164255743 + AluJb SINE Alu 1 303 -9 21 0 0 0 chr2 86432437 86432458 -164255396 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 86432636 86432666 -164255188 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 86433183 86433212 -164254642 + AT_rich Low_complexity Low_complexity 1 29 0 710 144 6 31 chr2 86433289 86433449 -164254405 + CT-rich Low_complexity Low_complexity 1 156 0 26 64 0 0 chr2 86433727 86433774 -164254080 + AT_rich Low_complexity Low_complexity 1 47 0 29 60 0 0 chr2 86434177 86434227 -164253627 + AT_rich Low_complexity Low_complexity 1 50 0 202 341 57 11 chr2 86434326 86434414 -164253440 + MIR SINE MIR 35 126 -136 645 249 69 5 chr2 86434428 86434617 -164253237 - MER67D LTR ERV1 -8 506 306 201 39 0 0 chr2 86435796 86435822 -164252032 + (CAA)n Simple_repeat Simple_repeat 1 26 0 26 30 0 0 chr2 86435851 86435884 -164251970 + AT_rich Low_complexity Low_complexity 1 33 0 356 328 75 27 chr2 86435915 86436101 -164251753 + MIR SINE MIR 20 214 -48 28 0 0 0 chr2 86437202 86437230 -164250624 + AT_rich Low_complexity Low_complexity 1 28 0 351 0 0 0 chr2 86437905 86437944 -164249910 + (TG)n Simple_repeat Simple_repeat 2 40 0 6225 281 31 31 chr2 86438145 86440317 -164247537 + L1PA12 LINE L1 729 2900 -4681 1392 96 14 19 chr2 86440320 86440529 -164247325 - MLT2A2 LTR ERVL -245 208 1 22 35 0 0 chr2 86440634 86440663 -164247191 + AT_rich Low_complexity Low_complexity 1 29 0 1854 256 91 24 chr2 86440690 86441842 -164246012 - L1M1 LINE L1 -4411 1971 839 22 0 0 0 chr2 86442302 86442324 -164245530 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 86442738 86442766 -164245088 + AT_rich Low_complexity Low_complexity 1 28 0 199 250 0 0 chr2 86443344 86443388 -164244466 - MIR3 SINE MIR -39 169 126 181 0 69 0 chr2 86443801 86443830 -164244024 + (TA)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr2 86443907 86443928 -164243926 + AT_rich Low_complexity Low_complexity 1 21 0 215 177 16 0 chr2 86443933 86443995 -164243859 + (TA)n Simple_repeat Simple_repeat 2 64 0 1960 102 11 0 chr2 86444965 86445239 -164242615 - AluSg SINE Alu -29 281 5 666 240 35 61 chr2 86445396 86445771 -164242083 - L1MEc LINE L1 -2930 3285 2921 22 56 0 0 chr2 86445781 86445817 -164242037 + AT_rich Low_complexity Low_complexity 1 36 0 248 70 23 0 chr2 86445820 86445863 -164241991 + (TA)n Simple_repeat Simple_repeat 2 45 0 440 296 43 2 chr2 86445898 86446088 -164241766 + L1M2 LINE L1 50 280 -6558 1525 244 74 57 chr2 86446160 86447185 -164240669 - L1MEc LINE L1 -3283 2932 1906 33 0 0 0 chr2 86447186 86447219 -164240635 + AT_rich Low_complexity Low_complexity 1 33 0 549 44 0 0 chr2 86448765 86448833 -164239021 + (CA)n Simple_repeat Simple_repeat 1 68 0 183 80 0 0 chr2 86448897 86448922 -164238932 + (T)n Simple_repeat Simple_repeat 1 25 0 198 113 32 32 chr2 86449324 86449386 -164238468 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 27 0 0 0 chr2 86449439 86449466 -164238388 + AT_rich Low_complexity Low_complexity 1 27 0 201 213 0 0 chr2 86450295 86450342 -164237512 + (TATG)n Simple_repeat Simple_repeat 2 48 0 237 291 0 0 chr2 86450800 86450855 -164236999 + L2 LINE L2 3218 3272 0 2484 138 28 13 chr2 86451488 86451878 -164235976 + MSTA LTR MaLR 30 425 -3 751 160 0 0 chr2 86451878 86451997 -164235857 - FRAM SINE Alu -33 143 25 855 151 6 93 chr2 86452077 86452249 -164235605 - FRAM SINE Alu -14 162 6 215 40 0 0 chr2 86453450 86453475 -164234379 + (T)n Simple_repeat Simple_repeat 1 25 0 617 172 60 0 chr2 86453843 86453959 -164233895 + MER57A LTR ERV1 1 123 -280 570 184 43 64 chr2 86453971 86454112 -164233742 + L1M1 LINE L1 14 151 -7414 2509 177 9 20 chr2 86454118 86454672 -164233182 + L1M1 LINE L1 1750 2520 -5045 * 5745 169 31 56 chr2 86454671 86456282 -164231572 + L1M1 LINE L1 5514 7070 -654 877 176 5 85 chr2 86456312 86456500 -164231354 - Tigger2 DNA MER2_type -1 2717 2545 392 52 35 0 chr2 86456549 86456607 -164231247 + Tigger2 DNA MER2_type 2495 2554 -164 13369 159 21 23 chr2 86456751 86459168 -164228686 - Tigger2 DNA MER2_type -306 2412 2 369 371 50 0 chr2 86459587 86459789 -164228065 + MIR SINE MIR 51 262 0 184 303 79 66 chr2 86459851 86460003 -164227851 + L2 LINE L2 3159 3312 -1 578 211 45 39 chr2 86460553 86460709 -164227145 + MER3 DNA MER1_type 53 209 0 1719 203 28 14 chr2 86461907 86462262 -164225592 - MLT1A1 LTR MaLR -4 361 2 353 326 65 88 chr2 86463754 86464094 -164223760 - L3 LINE CR1 -127 1450 1119 707 296 18 29 chr2 86464309 86464586 -164223268 - MER67D LTR ERV1 -38 476 203 345 54 108 0 chr2 86464589 86464700 -164223154 + (TA)n Simple_repeat Simple_repeat 2 124 0 3443 34 0 0 chr2 86464701 86465111 -164222743 - L1PA5 LINE L1 -14 6140 5731 1464 56 0 0 chr2 86465111 86465289 -164222565 + L1PA5 LINE L1 5535 5712 -442 829 159 76 93 chr2 86465289 86465514 -164222340 - MER67D LTR ERV1 -300 214 1 200 205 0 0 chr2 86466132 86466171 -164221683 + A-rich Low_complexity Low_complexity 2 40 0 293 369 56 30 chr2 86467512 86467710 -164220144 - L2 LINE L2 -527 2787 2585 406 399 13 56 chr2 86469728 86470104 -164217750 + L2 LINE L2 2900 3259 -13 264 59 0 0 chr2 86470599 86470633 -164217221 + (TG)n Simple_repeat Simple_repeat 2 35 0 22 0 0 0 chr2 86470854 86470876 -164216978 + AT_rich Low_complexity Low_complexity 1 22 0 482 326 14 0 chr2 86470965 86471103 -164216751 - MIR SINE MIR -71 191 52 325 299 153 7 chr2 86471173 86471310 -164216544 - L2 LINE L2 0 3272 3116 25 31 0 0 chr2 86471659 86471691 -164216163 + AT_rich Low_complexity Low_complexity 1 32 0 2102 119 3 13 chr2 86471987 86472298 -164215556 - AluSq SINE Alu -4 309 2 235 218 36 0 chr2 86473563 86473618 -164214236 + (TATG)n Simple_repeat Simple_repeat 3 59 0 2185 98 3 0 chr2 86473792 86474078 -164213776 + AluSq SINE Alu 1 287 -26 32 81 0 0 chr2 86474204 86474278 -164213576 + AT_rich Low_complexity Low_complexity 1 74 0 2263 71 26 13 chr2 86474417 86474726 -164213128 - AluSq SINE Alu 0 313 1 25 0 0 0 chr2 86474783 86474808 -164213046 + AT_rich Low_complexity Low_complexity 1 25 0 451 304 92 45 chr2 86474962 86475363 -164212491 + L1MCc LINE L1 4 423 -6000 230 303 53 0 chr2 86475649 86475725 -164212129 + L1MCc LINE L1 837 916 -5507 1439 78 0 0 chr2 86475729 86475909 -164211945 - AluSq SINE Alu -133 180 1 1888 214 113 5 chr2 86476004 86476555 -164211299 + L1MCc LINE L1 1108 1717 -5227 847 220 26 83 chr2 86476629 86476893 -164210961 + L1MD2 LINE L1 6102 6350 -9 346 303 103 43 chr2 86476893 86477109 -164210745 + L1ME2 LINE L1 5318 5551 -615 345 195 90 58 chr2 86477182 86477321 -164210533 + MER41B LTR ERV1 168 341 -251 * 1052 165 98 114 chr2 86477296 86477611 -164210243 + MER66A LTR ERV1 169 478 0 941 192 78 10 chr2 86477663 86477856 -164209998 + MER20 DNA MER1_type 1 206 -13 1036 268 51 26 chr2 86477859 86478274 -164209580 + L1ME2 LINE L1 5628 6052 -112 4779 164 23 12 chr2 86478275 86478391 -164209463 - Tigger1 DNA MER2_type -2 2416 2303 2367 75 0 0 chr2 86478391 86478683 -164209171 + AluY SINE Alu 1 292 -19 4779 164 23 12 chr2 86478683 86479408 -164208446 - Tigger1 DNA MER2_type -115 2303 1566 3803 154 19 88 chr2 86479408 86480917 -164206937 - pTR5 LTR ERV1 0 2606 1524 8719 151 50 12 chr2 86480917 86482432 -164205422 - Tigger1 DNA MER2_type -847 1571 1 342 339 165 8 chr2 86482616 86482858 -164204996 + L2 LINE L2 3033 3312 -1 24 53 0 0 chr2 86483210 86483248 -164204606 + AT_rich Low_complexity Low_complexity 1 38 0 379 324 92 12 chr2 86483455 86483628 -164204226 - MIR SINE MIR -29 233 47 216 312 86 11 chr2 86485067 86485160 -164202694 + L2 LINE L2 2395 2494 -820 3584 198 29 39 chr2 86485225 86486116 -164201738 - L1MA9 LINE L1 0 6312 5431 210 91 0 0 chr2 86486116 86486149 -164201705 + (TA)n Simple_repeat Simple_repeat 1 33 0 30190 116 16 56 chr2 86486149 86486165 -164201689 - L1PA7 LINE L1 -5 6149 6134 243 0 0 0 chr2 86486165 86486192 -164201662 + (TC)n Simple_repeat Simple_repeat 2 28 0 30190 116 16 56 chr2 86486192 86488394 -164199460 - L1PA7 LINE L1 -20 6134 3846 2230 116 3 0 chr2 86488394 86488704 -164199150 - AluSp SINE Alu -2 311 1 30190 116 16 56 chr2 86488704 86492888 -164194966 - L1PA7 LINE L1 -2308 3846 12 586 221 13 13 chr2 86492899 86493057 -164194797 - L1MA9 LINE L1 -880 5432 5275 3706 157 32 10 chr2 86543062 86543752 -164144102 + L1MC1 LINE L1 5611 6315 -18 23 54 0 0 chr2 86545587 86545624 -164142230 + AT_rich Low_complexity Low_complexity 1 37 0 260 189 27 27 chr2 86545661 86545735 -164142119 + (TTAG)n Simple_repeat Simple_repeat 3 76 0 533 354 67 4 chr2 86546138 86546378 -164141476 + MIR SINE MIR 2 256 -6 1712 172 21 0 chr2 86547091 86547213 -164140641 + AluSx SINE Alu 1 119 -193 240 35 0 0 chr2 86547213 86547242 -164140612 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1712 172 21 0 chr2 86547242 86547398 -164140456 + AluSx SINE Alu 119 285 -27 338 344 73 10 chr2 86547415 86547607 -164140247 - L1M4 LINE L1 -1917 4229 4026 216 67 0 0 chr2 86548992 86549022 -164138832 + (CA)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr2 86549752 86549773 -164138081 + AT_rich Low_complexity Low_complexity 1 21 0 2494 62 0 0 chr2 86549893 86550202 -164137652 - AluY SINE Alu -2 309 1 193 382 42 25 chr2 86551077 86551318 -164136536 + L3 LINE CR1 564 808 -769 2240 99 0 0 chr2 86551897 86552190 -164135664 + AluY SINE Alu 1 293 -18 24 0 0 0 chr2 86552190 86552214 -164135640 + AT_rich Low_complexity Low_complexity 1 24 0 2773 168 42 14 chr2 86552327 86553334 -164134520 - L1PB4 LINE L1 -425 5731 4707 1797 162 130 8 chr2 86553332 86553376 -164134478 + L1PB4 LINE L1 5741 5778 -378 * 387 0 0 0 chr2 86553376 86553419 -164134435 + (CA)n Simple_repeat Simple_repeat 2 44 0 1797 162 130 8 chr2 86553419 86553744 -164134110 + L1PB4 LINE L1 5778 6155 -1 25 31 0 0 chr2 86553771 86553803 -164134051 + AT_rich Low_complexity Low_complexity 1 32 0 620 158 0 0 chr2 86555388 86555489 -164132365 - LTR12 LTR ERV1 -133 581 481 312 242 11 0 chr2 86555490 86555585 -164132269 - LTR30 LTR ERV1 -79 643 548 1021 156 52 80 chr2 86555586 86555890 -164131964 - LTR12 LTR ERV1 -410 2028 53 225 235 20 0 chr2 86555890 86555941 -164131913 - LTR30 LTR ERV1 -670 52 1 1783 126 7 18 chr2 86555941 86556218 -164131636 + AluSx SINE Alu 31 304 -8 208 300 195 19 chr2 86556370 86556580 -164131274 - MIR SINE MIR 0 262 16 297 51 0 0 chr2 86556640 86556679 -164131175 + (CA)n Simple_repeat Simple_repeat 2 40 0 282 221 12 0 chr2 86557812 86557898 -164129956 + (TAA)n Simple_repeat Simple_repeat 2 88 0 1364 202 8 15 chr2 86557906 86558173 -164129681 - AluJb SINE Alu -45 267 3 23 54 0 0 chr2 86558175 86558212 -164129642 + AT_rich Low_complexity Low_complexity 1 37 0 2515 279 80 44 chr2 86558271 86559378 -164128476 - L1M1 LINE L1 -5624 1941 1 * 5148 269 67 29 chr2 86559362 86561471 -164126383 + L1 LINE L1 2544 4733 -1413 2080 110 0 20 chr2 86561764 86562064 -164125790 - AluSg SINE Alu -16 294 1 21 0 0 0 chr2 86562121 86562142 -164125712 + AT_rich Low_complexity Low_complexity 1 21 0 344 385 31 11 chr2 86562376 86562662 -164125192 + LTR16C LTR ERVL 195 486 -5 477 222 14 99 chr2 86562858 86563070 -164124784 - L1ME2 LINE L1 -106 6058 5865 973 236 20 5 chr2 86563074 86563277 -164124577 - MLT1A1 LTR MaLR -2 363 158 2183 102 0 3 chr2 86563848 86564159 -164123695 - AluSp SINE Alu 0 310 1 259 304 65 0 chr2 86564656 86564748 -164123106 - MIR SINE MIR -128 134 37 24 0 0 0 chr2 86564748 86564772 -164123082 + AT_rich Low_complexity Low_complexity 1 24 0 1384 154 43 24 chr2 86565204 86565457 -164122397 - AluSx SINE Alu -12 300 43 2249 88 3 3 chr2 86565559 86565855 -164121999 + AluY SINE Alu 1 296 -15 521 288 56 20 chr2 86565959 86566157 -164121697 + MLT1I LTR MaLR 5 209 -200 1943 182 49 11 chr2 86566639 86567007 -164120847 + MSTB LTR MaLR 1 382 -44 268 297 10 10 chr2 86567039 86567140 -164120714 + L1M4 LINE L1 293 393 -6253 697 277 47 41 chr2 86567420 86567763 -164120091 + L1M4 LINE L1 820 1164 -5378 * 3759 253 30 26 chr2 86567760 86569055 -164118799 + L1M4 LINE L1 4253 5552 -1092 2289 83 0 3 chr2 86569056 86569356 -164118498 + AluY SINE Alu 1 299 -12 511 152 0 29 chr2 86569371 86569476 -164118378 - L1 LINE L1 -1839 4307 4206 * 2048 193 14 7 chr2 86569471 86569885 -164117969 + L1 LINE L1 4734 5150 -996 333 130 0 0 chr2 86569885 86569939 -164117915 - MLT2A2 LTR ERVL 0 453 400 393 185 0 48 chr2 86569962 86570151 -164117703 + (TA)n Simple_repeat Simple_repeat 1 180 0 297 0 0 0 chr2 86570152 86570185 -164117669 + (CA)n Simple_repeat Simple_repeat 2 34 0 2778 123 15 5 chr2 86570185 86570585 -164117269 - MLT2A2 LTR ERVL -49 404 1 653 216 94 0 chr2 86570585 86570766 -164117088 + L1 LINE L1 5146 5343 -803 2086 129 0 3 chr2 86570769 86571064 -164116790 + AluSg SINE Alu 1 294 -16 22 0 0 0 chr2 86571094 86571116 -164116738 + AT_rich Low_complexity Low_complexity 1 22 0 2329 89 0 0 chr2 86571488 86571791 -164116063 - AluY SINE Alu -8 303 1 846 199 153 106 chr2 86571938 86572381 -164115473 - MLT1C LTR MaLR 0 467 4 1157 157 11 0 chr2 86573143 86573334 -164114520 - AluYa5 SINE Alu -16 295 103 3243 126 256 25 chr2 86573334 86574629 -164113225 - pTR5 LTR ERV1 0 2606 1524 647 124 0 44 chr2 86574629 86574742 -164113112 - AluSq/x SINE Alu -205 108 1 2319 86 0 7 chr2 86575978 86576280 -164111574 + AluY SINE Alu 1 300 -11 22 0 0 0 chr2 86577234 86577256 -164110598 + AT_rich Low_complexity Low_complexity 1 22 0 210 363 49 20 chr2 86577816 86577918 -164109936 + MIR SINE MIR 32 136 -72 699 158 0 25 chr2 86577920 86578040 -164109814 + MLT1B LTR MaLR 274 390 0 375 239 35 26 chr2 86580945 86581058 -164106796 - MER81 DNA DNA 0 114 1 216 67 0 0 chr2 86583218 86583248 -164104606 + (TAA)n Simple_repeat Simple_repeat 1 30 0 283 292 97 0 chr2 86583354 86583467 -164104387 - MLT1L LTR MaLR -343 272 149 21 36 0 0 chr2 86586062 86586090 -164101764 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 86586668 86586698 -164101156 + AT_rich Low_complexity Low_complexity 1 30 0 2983 186 52 133 chr2 86586956 86587806 -164100048 - L1MC3 LINE L1 -164 7621 6863 207 0 0 0 chr2 86587806 86587829 -164100025 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2983 186 52 133 chr2 86587829 86587980 -164099874 - L1MC3 LINE L1 -922 6863 6701 1091 296 118 28 chr2 86588710 86589253 -164098601 - MLT1E LTR MaLR -1 580 1 253 324 14 0 chr2 86590477 86590551 -164097303 - MIR3 SINE MIR -19 189 115 582 260 46 27 chr2 86590671 86590952 -164096902 - L1M LINE L1 -740 5426 5136 7224 247 80 23 chr2 86590961 86591650 -164096204 - L1MC3 LINE L1 -165 7620 6972 213 108 0 0 chr2 86591650 86591687 -164096167 + (TG)n Simple_repeat Simple_repeat 2 38 0 7224 247 80 23 chr2 86591687 86595841 -164092013 - L1MC3 LINE L1 -813 6972 2504 1853 161 0 3 chr2 86595871 86596162 -164091692 - AluSx SINE Alu -21 291 2 1951 158 60 62 chr2 86596322 86596403 -164091451 + MSTC LTR MaLR 1 81 -347 2263 63 42 0 chr2 86596403 86596690 -164091164 - AluY SINE Alu -12 299 1 2186 91 0 48 chr2 86596690 86596999 -164090855 - AluSc SINE Alu -15 294 1 1951 158 60 62 chr2 86596999 86597333 -164090521 + MSTC LTR MaLR 79 416 -12 27 29 0 0 chr2 86597469 86597503 -164090351 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr2 86598012 86598036 -164089818 + AT_rich Low_complexity Low_complexity 1 24 0 315 161 0 0 chr2 86598421 86598477 -164089377 + CT-rich Low_complexity Low_complexity 1 56 0 636 199 7 29 chr2 86598488 86598624 -164089230 - FLAM_A SINE Alu 0 133 1 21 0 0 0 chr2 86598847 86598868 -164088986 + AT_rich Low_complexity Low_complexity 1 21 0 228 333 0 0 chr2 86598946 86599030 -164088824 + MER117 DNA MER1_type 2 85 -112 247 310 75 43 chr2 86599338 86599525 -164088329 + MIR SINE MIR 36 228 -34 1778 248 16 41 chr2 86599879 86600371 -164087483 + L1MC/D LINE L1 4128 4602 -1544 2295 111 0 0 chr2 86600371 86600669 -164087185 + AluSc SINE Alu 1 298 -11 1778 248 16 41 chr2 86600669 86600810 -164087044 + L1MC/D LINE L1 4602 4745 -1401 1913 151 0 7 chr2 86600811 86601110 -164086744 + AluSx SINE Alu 1 297 -15 1878 192 51 47 chr2 86601137 86601955 -164085899 + L1MC/D LINE L1 4735 5553 -743 816 310 13 4 chr2 86602114 86602343 -164085511 + MIR SINE MIR 2 232 -30 1182 210 15 11 chr2 86602346 86602618 -164085236 - L1MB8 LINE L1 -29 6149 5877 21 0 0 0 chr2 86602651 86602672 -164085182 + AT_rich Low_complexity Low_complexity 1 21 0 853 215 0 40 chr2 86603333 86603426 -164084428 - MLT1C LTR MaLR 0 467 383 1813 129 120 20 chr2 86603426 86603767 -164084087 + THE1C LTR MaLR 1 375 0 853 215 0 40 chr2 86603767 86603850 -164084004 - MLT1C LTR MaLR -84 383 298 227 253 108 12 chr2 86603846 86603929 -164083925 - MLT1B LTR MaLR -203 264 174 * 235 255 0 0 chr2 86603979 86604030 -164083824 - MLT1B LTR MaLR -339 51 1 272 249 37 27 chr2 86604288 86604403 -164083451 - MIR SINE MIR -64 144 72 583 205 24 16 chr2 86604496 86604623 -164083231 + FLAM_C SINE Alu 4 131 -2 576 246 67 52 chr2 86604797 86605200 -164082654 + MLT1D LTR MaLR 1 390 0 495 213 28 0 chr2 86605204 86605312 -164082542 + MLT1D-int LTR MaLR 5 115 -1620 919 257 15 38 chr2 86605342 86605673 -164082181 + MLT1D-int LTR MaLR 471 884 -487 2433 81 0 3 chr2 86605752 86606060 -164081794 + AluY SINE Alu 5 311 0 493 309 0 0 chr2 86606249 86606372 -164081482 + MLT1D-int LTR MaLR 1316 1438 -297 * 954 218 6 33 chr2 86606366 86606695 -164081159 - MLT1B-int LTR MaLR -925 446 1 1553 218 39 26 chr2 86606695 86607080 -164080774 - MLT1B LTR MaLR 0 390 1 2089 120 10 3 chr2 86607177 86607476 -164080378 - AluSc SINE Alu -8 301 1 2145 131 0 6 chr2 86608222 86608536 -164079318 + AluSx SINE Alu 1 312 0 216 0 0 0 chr2 86609605 86609629 -164078225 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 27 62 0 0 chr2 86610173 86610221 -164077633 + AT_rich Low_complexity Low_complexity 1 48 0 26 82 0 0 chr2 86610501 86610562 -164077292 + AT_rich Low_complexity Low_complexity 1 61 0 189 0 0 0 chr2 86611228 86611249 -164076605 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 632 330 14 0 chr2 86611895 86612107 -164075747 + L1MDa LINE L1 44 258 -6282 3862 269 112 5 chr2 86612111 86613519 -164074335 + L1MDa LINE L1 420 1977 -4563 855 239 24 20 chr2 86613520 86613775 -164074079 - L1M4 LINE L1 -2065 4081 3826 2432 79 0 0 chr2 86614309 86614613 -164073241 + AluY SINE Alu 1 304 -7 225 154 0 39 chr2 86615605 86615657 -164072197 + (TAA)n Simple_repeat Simple_repeat 3 52 0 416 300 36 7 chr2 86615670 86615810 -164072044 - MIR SINE MIR -6 256 113 2136 88 4 0 chr2 86616653 86616927 -164070927 + AluSc SINE Alu 26 300 -9 558 235 6 48 chr2 86617512 86617678 -164070176 - Charlie4 DNA MER1_type 0 1961 1803 317 47 0 0 chr2 86618617 86618660 -164069194 - MADE1 DNA Mariner -37 43 1 616 266 17 12 chr2 86619238 86619411 -164068443 - MER45A DNA AcHobo -3 175 2 2477 90 34 0 chr2 86619829 86620183 -164067671 - L1PB1 LINE L1 -1 6150 5785 282 179 0 0 chr2 86620187 86620243 -164067611 + (TA)n Simple_repeat Simple_repeat 2 57 0 244 202 21 64 chr2 86620243 86620337 -164067517 - L1MC4 LINE L1 -1339 6703 6614 * 3653 104 4 6 chr2 86620335 86620892 -164066962 - L1P5 LINE L1 -361 5790 5235 1864 162 14 0 chr2 86620903 86621193 -164066661 - AluSx SINE Alu -16 296 3 612 194 0 0 chr2 86622763 86622887 -164064967 + (TG)n Simple_repeat Simple_repeat 2 125 0 1975 130 0 0 chr2 86624243 86624519 -164063335 + AluSq SINE Alu 2 277 -36 2102 115 3 3 chr2 86624546 86624834 -164063020 + AluY SINE Alu 1 288 -23 279 0 0 0 chr2 86624835 86624866 -164062988 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 251 300 38 0 chr2 86624884 86624964 -164062890 - MIR SINE MIR -105 157 75 593 189 31 127 chr2 86625238 86625466 -164062388 + MER3 DNA MER1_type 3 208 -1 189 74 0 0 chr2 86625495 86625522 -164062332 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 324 359 16 8 chr2 86626024 86626152 -164061702 - MLT1I LTR MaLR -210 199 71 2202 125 11 40 chr2 86627277 86627630 -164060224 - MER61A LTR ERV1 0 343 1 1873 129 7 4 chr2 86627901 86628221 -164059633 + AluSc SINE Alu 1 321 0 606 271 102 5 chr2 86629567 86629980 -164057874 + L1M4 LINE L1 3079 3531 -2615 1114 187 20 24 chr2 86629981 86630063 -164057791 - L1 LINE L1 -1893 4253 4172 2006 153 30 33 chr2 86630063 86630428 -164057426 + THE1B LTR MaLR 1 364 0 1114 187 20 24 chr2 86630428 86630591 -164057263 - L1 LINE L1 -1974 4172 4009 700 222 6 60 chr2 86630593 86630760 -164057094 - FRAM SINE Alu -18 158 1 611 250 19 43 chr2 86631025 86631233 -164056621 - MER3 DNA MER1_type -6 203 1 2476 46 7 3 chr2 86631590 86631897 -164055957 - AluY SINE Alu -3 308 1 552 45 34 0 chr2 86632110 86632198 -164055656 + (TAGA)n Simple_repeat Simple_repeat 3 93 0 889 231 109 14 chr2 86632330 86632614 -164055240 + MER57A LTR ERV1 104 400 -3 219 289 67 39 chr2 86632729 86632833 -164055021 - L2 LINE L2 -10 3303 3197 1655 165 37 60 chr2 86632835 86633186 -164054668 - MER61A LTR ERV1 0 343 1 1687 180 27 27 chr2 86633212 86633540 -164054314 + MLT2D LTR ERVL 1 328 -86 2092 117 10 16 chr2 86633752 86634061 -164053793 - AluSq SINE Alu -6 307 1 685 122 0 0 chr2 86634513 86634611 -164053243 + AluSg SINE Alu 1 98 -212 1892 102 0 19 chr2 86634612 86634876 -164052978 + AluSg SINE Alu 52 310 0 2395 63 0 0 chr2 86635448 86635755 -164052099 - AluY SINE Alu 0 307 1 2188 98 9 29 chr2 86637374 86637689 -164050165 + AluSx SINE Alu 1 309 -3 21 36 0 0 chr2 86638536 86638564 -164049290 + AT_rich Low_complexity Low_complexity 1 28 0 836 250 20 5 chr2 86638578 86638774 -164049080 + MER20 DNA MER1_type 14 212 -7 1857 144 66 74 chr2 86638815 86639328 -164048526 + LTR4 LTR ERV1 101 596 0 305 224 30 0 chr2 86639427 86639494 -164048360 - MSTC LTR MaLR -305 123 55 2156 123 13 0 chr2 86639548 86639856 -164047998 - AluSx SINE Alu 0 312 1 1490 177 52 49 chr2 86639899 86640194 -164047660 - MSTC-int LTR MaLR 0 1735 1437 2153 120 6 19 chr2 86640194 86640510 -164047344 + AluSq SINE Alu 1 312 -1 1490 177 52 49 chr2 86640510 86640541 -164047313 - MSTC-int LTR MaLR -298 1437 1408 543 213 0 0 chr2 86640543 86640679 -164047175 + GA-rich Low_complexity Low_complexity 1 136 0 1907 267 60 36 chr2 86640679 86641263 -164046591 - MSTC-int LTR MaLR -297 1438 841 304 268 59 100 chr2 86641423 86641643 -164046211 + L1ME3A LINE L1 5730 5940 -230 21 36 0 0 chr2 86641840 86641868 -164045986 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 86642683 86642708 -164045146 + AT_rich Low_complexity Low_complexity 1 25 0 2494 54 0 0 chr2 86643499 86643796 -164044058 + AluY SINE Alu 1 297 -14 513 239 153 9 chr2 86643979 86644199 -164043655 - MER110A LTR ERV1 -3 465 259 2023 103 10 33 chr2 86644284 86644586 -164043268 - AluY SINE Alu -15 296 2 21 71 0 0 chr2 86644668 86644710 -164043144 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 86645051 86645074 -164042780 + AT_rich Low_complexity Low_complexity 1 23 0 2446 170 29 11 chr2 86645134 86645587 -164042267 - LOR1b LTR ERV1 0 461 1 2747 152 9 0 chr2 86645744 86646192 -164041662 - LOR1a LTR ERV1 0 497 46 23 0 0 0 chr2 86646199 86646222 -164041632 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 86646384 86646405 -164041449 + AT_rich Low_complexity Low_complexity 1 21 0 2439 74 0 0 chr2 86646466 86646763 -164041091 + AluY SINE Alu 1 297 -14 350 302 86 43 chr2 86646924 86647298 -164040556 + L1ME LINE L1 4580 4969 -1177 27 29 0 0 chr2 86647481 86647515 -164040339 + AT_rich Low_complexity Low_complexity 1 34 0 531 306 99 22 chr2 86647544 86647956 -164039898 + L1ME LINE L1 5258 5701 -461 877 315 154 8 chr2 86647996 86648478 -164039376 - MLT1F1 LTR MaLR 0 567 17 2014 90 0 105 chr2 86648478 86648822 -164039032 - AluSc SINE Alu -1 308 1 275 323 75 12 chr2 86648839 86648933 -164038921 + L1ME LINE L1 5719 5829 -341 2294 74 3 7 chr2 86648933 86649229 -164038625 + AluY SINE Alu 1 295 -16 275 323 75 12 chr2 86649229 86649295 -164038559 + L1ME LINE L1 5829 5889 -281 261 0 0 0 chr2 86649408 86649437 -164038417 + (T)n Simple_repeat Simple_repeat 1 29 0 23 68 0 0 chr2 86649603 86649647 -164038207 + AT_rich Low_complexity Low_complexity 1 44 0 903 261 85 64 chr2 86652274 86652623 -164035231 + MLT1J1 LTR MaLR 42 401 -45 1420 169 25 75 chr2 86652623 86652942 -164034912 + AluJb SINE Alu 1 303 -9 903 261 85 64 chr2 86652942 86652968 -164034886 + MLT1J1 LTR MaLR 401 425 -21 2055 129 18 49 chr2 86653609 86653996 -164033858 - THE1C LTR MaLR 0 375 1 1897 198 19 75 chr2 86654551 86655087 -164032767 + MER67D LTR ERV1 5 510 -4 412 250 0 0 chr2 86655230 86655306 -164032548 - MER30 DNA MER1_type -2 228 153 * 1182 148 15 0 chr2 86655299 86655495 -164032359 - MER30 DNA MER1_type -31 199 1 258 260 40 102 chr2 86656172 86656349 -164031505 - L2 LINE L2 0 3313 3148 205 93 37 37 chr2 86657584 86657638 -164030216 + T-rich Low_complexity Low_complexity 4 57 0 926 210 87 17 chr2 86658391 86658691 -164029163 - MER33 DNA MER1_type 0 324 4 410 277 19 38 chr2 86659406 86659565 -164028289 + L2 LINE L2 3154 3309 -4 377 231 113 54 chr2 86660942 86661145 -164026709 - LTR37B LTR ERV1 0 468 254 313 219 96 34 chr2 86661290 86661436 -164026418 - LTR37B LTR ERV1 -306 162 8 258 313 41 102 chr2 86663469 86663616 -164024238 - MIR3 SINE MIR -29 179 42 2353 96 0 0 chr2 86663715 86664016 -164023838 - AluSx SINE Alu -11 301 1 5572 137 8 20 chr2 86664897 86666015 -164021839 - L1PA15 LINE L1 -2 6163 5052 391 384 34 71 chr2 86666961 86667315 -164020539 - L2 LINE L2 -13 3259 2919 598 253 16 43 chr2 86668621 86668807 -164019047 + MER58A DNA MER1_type 44 224 0 297 331 58 7 chr2 86669141 86669280 -164018574 + MLT1J2 LTR MaLR 24 169 -281 233 316 72 39 chr2 86669854 86670240 -164017614 - L1MEc LINE L1 -4732 1664 1266 2155 104 3 10 chr2 86670415 86670714 -164017140 - AluSg SINE Alu -13 297 1 305 295 101 22 chr2 86671630 86671857 -164015997 - HAL1 LINE L1 -1519 988 744 287 200 0 13 chr2 86672836 86672911 -164014943 + CT-rich Low_complexity Low_complexity 4 77 0 1049 98 0 0 chr2 86673426 86673580 -164014274 - AluSc SINE Alu 0 303 150 297 136 0 0 chr2 86673584 86673628 -164014226 - Alu SINE Alu -258 44 1 2246 121 0 0 chr2 86673628 86673935 -164013919 - AluSg SINE Alu -3 307 1 360 0 0 0 chr2 86674129 86674169 -164013685 + (CA)n Simple_repeat Simple_repeat 1 40 0 42895 30 22 1 chr2 86675514 86681539 -164006315 + L1PA2 LINE L1 1 6153 -2 186 71 0 0 chr2 86681547 86681575 -164006279 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2342 284 84 48 chr2 86682143 86682248 -164005606 + L1MEc LINE L1 28 128 -6268 539 210 0 98 chr2 86682248 86682391 -164005463 + FLAM_A SINE Alu 1 129 -4 2342 284 84 48 chr2 86682391 86683030 -164004824 + L1MEc LINE L1 128 742 -5654 1927 140 3 0 chr2 86683030 86683359 -164004495 + AluSq SINE Alu 1 330 0 2342 284 84 48 chr2 86683359 86683916 -164003938 + L1MEc LINE L1 742 1379 -5017 858 239 47 94 chr2 86683945 86684350 -164003504 - L1MD3 LINE L1 -797 7198 6813 2669 36 0 3 chr2 86684358 86684665 -164003189 - AluY SINE Alu -5 306 1 897 238 107 45 chr2 86684707 86685206 -164002648 - L1MC4a LINE L1 -1213 6595 6061 1737 279 72 28 chr2 86685213 86686346 -164001508 + L1M4 LINE L1 2984 4166 -1980 1280 159 176 30 chr2 86686473 86686906 -164000948 - LTR54B LTR ERV1 -2 496 1 243 0 0 0 chr2 86687032 86687060 -164000794 - L1PA8 LINE L1 -447 5725 5698 3305 53 2 0 chr2 86687060 86687477 -164000377 + L1PA8 LINE L1 5742 6159 -13 44 0 0 0 chr2 86687477 86687521 -164000333 + AT_rich Low_complexity Low_complexity 1 44 0 584 177 6 0 chr2 86687521 86687696 -164000158 + (TA)n Simple_repeat Simple_repeat 2 177 0 5919 67 15 13 chr2 86688102 86688880 -163998974 + LTR17 LTR ERV1 1 780 0 24 67 0 0 chr2 86688895 86688940 -163998914 + AT_rich Low_complexity Low_complexity 1 45 0 28 35 0 35 chr2 86689126 86689144 -163998710 + AT_rich Low_complexity Low_complexity 1 18 -37 2305 115 0 0 chr2 86689144 86689456 -163998398 - AluSp SINE Alu -1 312 1 28 35 0 35 chr2 86689456 86689494 -163998360 + AT_rich Low_complexity Low_complexity 18 55 0 194 351 114 0 chr2 86689707 86689821 -163998033 + MIR SINE MIR 16 142 -66 2166 129 0 19 chr2 86689894 86690212 -163997642 - AluSx SINE Alu 0 312 1 25 31 0 0 chr2 86692173 86692205 -163995649 + AT_rich Low_complexity Low_complexity 1 32 0 378 276 39 8 chr2 86692765 86692892 -163994962 + MIR SINE MIR 70 200 -62 284 261 0 58 chr2 86693706 86693775 -163994079 + L2 LINE L2 3187 3251 -62 707 194 57 31 chr2 86693946 86694260 -163993594 - MSTD LTR MaLR -2 394 13 1133 96 5 48 chr2 86694638 86694826 -163993028 + L1PA13 LINE L1 5979 6158 -5 203 372 0 0 chr2 86695443 86695529 -163992325 - MIR SINE MIR -101 161 76 742 277 116 46 chr2 86695826 86696129 -163991725 - MLT1D LTR MaLR -91 414 91 596 196 52 135 chr2 86696129 86696359 -163991495 - MLT1D-int LTR MaLR -1 1370 1160 3627 107 0 4 chr2 86696447 86696960 -163990894 - MER9 LTR ERVK 0 511 1 207 114 0 0 chr2 86697187 86697222 -163990632 + (ATG)n Simple_repeat Simple_repeat 1 35 0 560 261 139 0 chr2 86697245 86697410 -163990444 - MIR SINE MIR -10 252 65 24 0 0 0 chr2 86699423 86699447 -163988407 + AT_rich Low_complexity Low_complexity 1 24 0 693 393 39 19 chr2 86702052 86702688 -163985166 - ERVL LTR ERVL -1247 4517 3869 281 409 14 9 chr2 86702851 86703066 -163984788 - ERVL LTR ERVL -2114 3650 3435 297 0 0 0 chr2 86704844 86704877 -163982977 + (CA)n Simple_repeat Simple_repeat 2 34 0 2210 116 3 0 chr2 86705335 86705645 -163982209 + AluSp SINE Alu 1 311 -2 218 123 15 46 chr2 86705885 86705950 -163981904 + (TA)n Simple_repeat Simple_repeat 1 63 0 21 0 0 0 chr2 86706647 86706668 -163981186 + AT_rich Low_complexity Low_complexity 1 21 0 1094 242 18 0 chr2 86707512 86707785 -163980069 - L1MD2 LINE L1 -24 6335 6058 * 2847 231 40 21 chr2 86707783 86708072 -163979782 + L1MD2 LINE L1 5307 5589 -770 1913 146 0 52 chr2 86708072 86708400 -163979454 - AluSx SINE Alu -1 311 1 2847 231 40 21 chr2 86708400 86708866 -163978988 + L1MD2 LINE L1 5589 6076 -283 207 315 28 9 chr2 86708974 86709082 -163978772 + (TA)n Simple_repeat Simple_repeat 2 111 0 378 117 21 21 chr2 86709083 86709177 -163978677 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 22 0 0 0 chr2 86709723 86709745 -163978109 + AT_rich Low_complexity Low_complexity 1 22 0 354 305 85 29 chr2 86710344 86710614 -163977240 + L1ME LINE L1 5533 5796 -325 265 308 32 54 chr2 86710874 86711059 -163976795 + MLT1J LTR MaLR 98 278 -233 1967 101 49 3 chr2 86711062 86711349 -163976505 - AluY SINE Alu -11 300 1 240 232 20 40 chr2 86712096 86712195 -163975659 + CT-rich Low_complexity Low_complexity 3 99 0 1819 276 58 30 chr2 86712228 86712897 -163974957 - L1ME1 LINE L1 -44 6191 5506 1229 196 122 152 chr2 86712897 86713469 -163974385 + MLT1F1 LTR MaLR 1 555 -12 252 228 38 95 chr2 86713477 86713560 -163974294 - L1ME1 LINE L1 -733 5502 5431 1865 124 0 4 chr2 86713560 86713826 -163974028 - AluSg SINE Alu -45 265 1 252 228 38 95 chr2 86713826 86713900 -163973954 - L1ME1 LINE L1 -804 5431 5354 1210 272 53 36 chr2 86713902 86714575 -163973279 - L1ME1 LINE L1 -901 5314 4630 868 116 36 0 chr2 86714727 86714865 -163972989 + L1PA10 LINE L1 6026 6168 0 189 132 0 0 chr2 86714927 86714965 -163972889 + (T)n Simple_repeat Simple_repeat 1 38 0 629 284 69 34 chr2 86714997 86715593 -163972261 - L1ME1 LINE L1 -4811 1585 969 2024 123 0 3 chr2 86716025 86716309 -163971545 - AluSg SINE Alu -27 283 1 337 54 36 0 chr2 86716403 86716459 -163971395 + (GA)n Simple_repeat Simple_repeat 1 58 0 249 33 0 0 chr2 86717649 86717679 -163970175 + (TG)n Simple_repeat Simple_repeat 2 31 0 325 329 45 68 chr2 86717706 86718016 -163969838 - L2 LINE L2 -47 3266 2964 259 383 56 6 chr2 86718402 86718582 -163969272 + MIR SINE MIR 25 213 -49 30 0 0 0 chr2 86718805 86718835 -163969019 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 86720087 86720113 -163967741 + AT_rich Low_complexity Low_complexity 1 26 0 24 67 0 0 chr2 86722008 86722053 -163965801 + AT_rich Low_complexity Low_complexity 1 45 0 1751 134 3 69 chr2 86722060 86722366 -163965488 - AluSx SINE Alu -26 286 1 268 300 0 0 chr2 86723544 86723634 -163964220 + L1ME3A LINE L1 5682 5771 -2037 225 240 52 73 chr2 86724084 86724276 -163963578 + L1ME LINE L1 5301 5488 -676 1367 269 83 40 chr2 86724277 86724960 -163962894 + L1ME LINE L1 56 768 -5302 493 68 86 18 chr2 86724975 86725138 -163962716 + (TA)n Simple_repeat Simple_repeat 1 174 0 29 0 0 0 chr2 86725138 86725167 -163962687 + AT_rich Low_complexity Low_complexity 1 29 0 694 70 52 12 chr2 86725167 86725339 -163962515 + (TA)n Simple_repeat Simple_repeat 2 180 0 33 0 0 0 chr2 86725339 86725372 -163962482 + AT_rich Low_complexity Low_complexity 1 33 0 593 78 78 0 chr2 86725372 86725538 -163962316 + (TA)n Simple_repeat Simple_repeat 2 180 0 296 276 64 70 chr2 86725547 86725892 -163961962 + L1ME LINE L1 810 1103 -4977 375 247 53 47 chr2 86725919 86726069 -163961785 + L1ME3A LINE L1 6019 6169 -1 * 396 294 37 28 chr2 86726065 86726302 -163961552 + L1MCa LINE L1 1 206 -5839 261 0 0 0 chr2 86726321 86726350 -163961504 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 330 26 0 0 chr2 86726349 86726388 -163961466 + (GA)n Simple_repeat Simple_repeat 2 40 0 233 234 0 0 chr2 86726400 86726447 -163961407 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 213 65 0 0 chr2 86726449 86726480 -163961374 + (GA)n Simple_repeat Simple_repeat 2 32 0 1649 174 7 4 chr2 86726480 86726756 -163961098 - AluJo SINE Alu -30 282 6 1252 240 46 97 chr2 86727127 86727660 -163960194 + L1MCa LINE L1 573 1070 -4975 1992 116 18 0 chr2 86727660 86727957 -163959897 + AluSc SINE Alu 1 302 0 1252 240 46 97 chr2 86727957 86728071 -163959783 + L1MCa LINE L1 1070 1188 -4857 * 7957 228 64 28 chr2 86728069 86730356 -163957498 + L1MC3 LINE L1 5272 7639 -146 652 200 7 30 chr2 86730356 86730491 -163957363 + FLAM_A SINE Alu 1 132 -1 361 156 26 0 chr2 86730492 86730569 -163957285 + GA-rich Low_complexity Low_complexity 1 79 0 578 214 62 0 chr2 86730581 86730726 -163957128 + L1MC3 LINE L1 7631 7784 -1 252 77 0 0 chr2 86731021 86731060 -163956794 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 376 303 69 56 chr2 86731357 86731588 -163956266 - L1MC4a LINE L1 -1703 6105 5872 929 248 9 5 chr2 86733740 86733958 -163953896 - MER20 DNA MER1_type 0 219 1 2195 177 64 30 chr2 86734216 86734686 -163953168 + MER66B LTR ERV1 1 486 0 319 269 0 46 chr2 86734828 86734936 -163952918 + L1MC4 LINE L1 6600 6702 -1340 * 335 227 14 61 chr2 86734849 86734994 -163952860 - L1MC4 LINE L1 -1339 6703 6604 213 151 0 0 chr2 86734996 86735049 -163952805 + (TA)n Simple_repeat Simple_repeat 2 54 0 305 283 30 0 chr2 86735049 86735148 -163952706 - L1MC4 LINE L1 -1337 6705 6604 305 245 20 39 chr2 86735160 86735262 -163952592 - L1MC4 LINE L1 -1339 6703 6604 301 255 0 43 chr2 86735248 86735342 -163952512 - L1MC4 LINE L1 -1339 6703 6614 * 312 269 0 39 chr2 86735350 86735454 -163952400 - L1MC4 LINE L1 -1339 6703 6604 306 231 22 44 chr2 86735490 86735581 -163952273 - L1MC4 LINE L1 -1339 6703 6615 192 77 0 0 chr2 86735585 86735611 -163952243 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 2121 119 0 0 chr2 86735611 86735896 -163951958 - AluSx SINE Alu -27 285 1 228 122 0 0 chr2 86736459 86736500 -163951354 + (A)n Simple_repeat Simple_repeat 1 41 0 207 0 0 0 chr2 86736565 86736588 -163951266 + (T)n Simple_repeat Simple_repeat 1 23 0 833 247 48 9 chr2 86737033 86737264 -163950590 + LTR16A1 LTR ERVL 218 457 0 181 229 82 33 chr2 86738328 86738389 -163949465 - L2 LINE L2 -2629 685 622 22 35 0 0 chr2 86738839 86738868 -163948986 + AT_rich Low_complexity Low_complexity 1 29 0 293 167 0 0 chr2 86739204 86739264 -163948590 - L1PB4 LINE L1 -2 6154 6095 196 375 36 9 chr2 86739278 86739390 -163948464 - MIR SINE MIR -28 234 120 505 218 58 13 chr2 86740298 86740379 -163947475 + L1MC5 LINE L1 7301 7377 -584 441 0 0 0 chr2 86740379 86740428 -163947426 + (CA)n Simple_repeat Simple_repeat 2 50 0 505 218 58 13 chr2 86740428 86740502 -163947352 + L1MC5 LINE L1 7377 7463 -498 188 239 42 0 chr2 86740537 86740608 -163947246 + (CAGAGA)n Simple_repeat Simple_repeat 2 75 0 438 209 168 102 chr2 86740677 86740963 -163946891 + L1MC5 LINE L1 7484 7804 -157 715 283 11 5 chr2 86740963 86741150 -163946704 - MER5A DNA MER1_type 0 189 2 438 209 168 102 chr2 86741150 86741255 -163946599 + L1MC5 LINE L1 7804 7901 -60 384 270 47 70 chr2 86741280 86741495 -163946359 + L1ME3A LINE L1 5927 6136 -34 211 150 25 0 chr2 86741571 86741611 -163946243 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1166 390 57 38 chr2 86741743 86742463 -163945391 + L2 LINE L2 1748 2481 -833 1923 138 66 20 chr2 86743036 86743384 -163944470 + THE1B LTR MaLR 1 364 0 205 317 77 72 chr2 86743535 86743756 -163944098 + L2 LINE L2 2695 2916 -398 962 283 46 48 chr2 86743828 86744262 -163943592 - MLT1H1 LTR MaLR -122 433 1 192 40 0 0 chr2 86744595 86744620 -163943234 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 384 164 194 82 chr2 86744727 86744835 -163943019 - MER67D LTR ERV1 -3 511 384 1834 158 7 0 chr2 86744835 86745126 -163942728 + AluSx SINE Alu 5 297 -15 384 164 194 82 chr2 86745126 86745151 -163942703 - MER67D LTR ERV1 -130 384 363 226 169 28 42 chr2 86745265 86745336 -163942518 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 518 298 75 5 chr2 86745804 86745992 -163941862 - L2 LINE L2 0 3313 3113 3097 101 11 37 chr2 86746887 86747352 -163940502 - MLT2A2 LTR ERVL 0 453 1 15782 77 29 8 chr2 86747362 86747424 -163940430 - HERVL-A2 LTR ERVL -10 5644 5585 2271 88 14 0 chr2 86747424 86747719 -163940135 + AluSx SINE Alu 1 299 -13 15782 77 29 8 chr2 86747719 86749922 -163937932 - HERVL-A2 LTR ERVL -69 5585 3333 2234 73 31 0 chr2 86750698 86750985 -163936869 - AluY SINE Alu -15 296 1 997 167 17 39 chr2 86750985 86751219 -163936635 - L1MC2 LINE L1 -15 6329 6101 1213 315 60 35 chr2 86751289 86752165 -163935689 - L2 LINE L2 0 3313 2424 390 182 204 62 chr2 86753297 86753593 -163934261 + MER33 DNA MER1_type 1 302 -22 187 272 12 150 chr2 86753657 86753830 -163934024 - L3 LINE CR1 -119 1458 1310 21 0 0 0 chr2 86754806 86754827 -163933027 + AT_rich Low_complexity Low_complexity 1 21 0 386 327 249 13 chr2 86756920 86757318 -163930536 - L2 LINE L2 -18 3295 2804 312 331 21 28 chr2 86757335 86757477 -163930377 - MER5B DNA MER1_type -36 142 2 184 348 0 0 chr2 86757539 86757628 -163930226 - L2 LINE L2 -540 2774 2686 2133 119 3 31 chr2 86757800 86758119 -163929735 - AluSp SINE Alu -3 310 1 288 0 0 0 chr2 86758557 86758589 -163929265 + (CA)n Simple_repeat Simple_repeat 2 33 0 978 248 31 27 chr2 86758606 86758900 -163928954 - MLT2D LTR ERVL -119 295 1 297 75 0 0 chr2 86759272 86759312 -163928542 + (CATA)n Simple_repeat Simple_repeat 2 41 0 322 173 12 25 chr2 86759314 86759395 -163928459 + (TATATG)n Simple_repeat Simple_repeat 3 82 0 270 216 0 11 chr2 86759404 86759492 -163928362 - L1MC4 LINE L1 -1342 6700 6614 1004 150 0 6 chr2 86759506 86759686 -163928168 + (TA)n Simple_repeat Simple_repeat 2 180 0 242 193 53 0 chr2 86759735 86759792 -163928062 - MER20 DNA MER1_type -155 64 5 574 263 104 40 chr2 86759795 86760046 -163927808 - LTR40c LTR ERVL -198 267 1 2193 129 0 0 chr2 86760691 86761001 -163926853 - AluSg SINE Alu 0 310 1 21 71 0 0 chr2 86761364 86761406 -163926448 + AT_rich Low_complexity Low_complexity 1 42 0 1538 194 56 47 chr2 86761515 86761875 -163925979 - MLT1A1 LTR MaLR -2 363 1 459 317 25 12 chr2 86763028 86763189 -163924665 - MER45A DNA AcHobo 0 178 16 277 214 34 22 chr2 86763221 86763310 -163924544 + CT-rich Low_complexity Low_complexity 2 91 0 192 118 29 0 chr2 86763984 86764018 -163923836 - L2 LINE L2 -1281 2033 1999 903 100 3 0 chr2 86764212 86764354 -163923500 - LTR12 LTR ERV1 0 714 457 4590 98 40 8 chr2 86764354 86765020 -163922834 - LTR12 LTR ERV1 0 688 1 1188 268 90 74 chr2 86765431 86765517 -163922337 - L1ME3A LINE L1 -7 6163 6080 2139 116 0 10 chr2 86765517 86765811 -163922043 + AluSg SINE Alu 1 291 -19 1188 268 90 74 chr2 86765811 86766818 -163921036 - L1ME3A LINE L1 -90 6080 5048 627 221 16 0 chr2 86766839 86766966 -163920888 - AluJb SINE Alu -46 266 138 4355 62 7 0 chr2 86767008 86767559 -163920295 - L1PA8 LINE L1 -2 6170 5616 284 305 8 38 chr2 86767560 86767691 -163920163 - L1ME3A LINE L1 -1121 5025 4899 901 181 12 0 chr2 86767892 86768058 -163919796 - FRAM SINE Alu -3 173 6 4620 102 83 86 chr2 86768058 86769426 -163918428 + pTR5 LTR ERV1 743 2438 0 521 254 15 8 chr2 86769448 86769578 -163918276 - AluJb SINE Alu -181 131 1 1560 193 30 7 chr2 86770143 86770438 -163917416 + AluJo SINE Alu 3 304 -8 992 222 31 29 chr2 86770969 86771054 -163916800 + L1MA9 LINE L1 4424 4507 -1805 1291 20 0 0 chr2 86771054 86771206 -163916648 + L1PA4 LINE L1 5998 6149 -6 992 222 31 29 chr2 86771206 86772172 -163915682 + L1MA9 LINE L1 4507 5630 -682 192 40 0 0 chr2 86772172 86772197 -163915657 + (CA)n Simple_repeat Simple_repeat 2 26 0 992 222 31 29 chr2 86772197 86772362 -163915492 + L1MA9 LINE L1 5630 5793 -519 305 289 0 0 chr2 86772394 86772484 -163915370 - L1MC4 LINE L1 -1337 6705 6616 217 132 0 0 chr2 86772485 86772523 -163915331 + (TA)n Simple_repeat Simple_repeat 1 38 0 2226 151 39 28 chr2 86772526 86772983 -163914871 + L1MA9 LINE L1 5811 6272 -40 21 0 0 0 chr2 86772985 86773006 -163914848 + AT_rich Low_complexity Low_complexity 1 21 0 39 74 0 0 chr2 86776008 86776089 -163911765 + AT_rich Low_complexity Low_complexity 1 81 0 270 336 75 27 chr2 86777609 86777755 -163910099 + MIR3 SINE MIR 46 198 -10 219 139 0 0 chr2 86778128 86778164 -163909690 + (TTA)n Simple_repeat Simple_repeat 1 36 0 21 36 0 0 chr2 86779753 86779781 -163908073 + AT_rich Low_complexity Low_complexity 1 28 0 1587 186 69 3 chr2 86779789 86780080 -163907774 - AluJb SINE Alu -2 310 1 624 229 8 0 chr2 86781338 86781456 -163906398 + FLAM_C SINE Alu 5 123 -10 189 245 265 20 chr2 86781505 86781603 -163906251 + MIR SINE MIR 128 249 -13 24 53 0 0 chr2 86781704 86781742 -163906112 + AT_rich Low_complexity Low_complexity 1 38 0 36 62 0 0 chr2 86782111 86782175 -163905679 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr2 86783737 86783759 -163904095 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 86785523 86785551 -163902303 + AT_rich Low_complexity Low_complexity 1 28 0 1574 197 82 15 chr2 86785792 86786132 -163901722 + MER74A LTR ERVL 15 377 -181 245 297 0 0 chr2 86786137 86786201 -163901653 + T-rich Low_complexity Low_complexity 1 64 0 2320 63 0 0 chr2 86786202 86786502 -163901352 - L1PA5 LINE L1 -1 6153 5854 1466 44 0 0 chr2 86786502 86786683 -163901171 + L1P LINE L1 2517 2697 -3449 623 241 28 0 chr2 86786683 86786828 -163901026 + MER74B LTR ERVL 448 596 -26 6967 148 56 16 chr2 86888137 86889486 -163798368 + L1M4c LINE L1 763 2165 -4219 2751 168 18 40 chr2 86889607 86890178 -163797676 - L1MC3 LINE L1 -1164 6621 6064 842 279 4 4 chr2 86890197 86890434 -163797420 - AluSc SINE Alu -31 278 42 586 188 194 0 chr2 86892422 86892566 -163795288 + MER3 DNA MER1_type 2 126 -83 921 96 13 83 chr2 86892581 86892738 -163795116 + FRAM SINE Alu 12 157 -19 266 211 53 35 chr2 86892738 86892795 -163795059 - MER3 DNA MER1_type -123 86 29 391 154 0 39 chr2 86893216 86893297 -163794557 - MLT1A1 LTR MaLR -1 383 300 333 159 0 14 chr2 86893291 86893360 -163794494 - Alu SINE Alu 0 302 235 * 21 0 0 0 chr2 86893644 86893665 -163794189 + GC_rich Low_complexity Low_complexity 1 21 0 1208 115 23 6 chr2 86893905 86894079 -163793775 + AluSq SINE Alu 129 305 -8 659 195 0 0 chr2 86894300 86894423 -163793431 - AluJb SINE Alu -23 289 167 218 344 50 22 chr2 86894502 86894682 -163793172 - MIR SINE MIR -58 204 20 626 175 150 87 chr2 86896421 86896527 -163791327 - L1MDa LINE L1 -4863 1677 1579 2069 136 7 0 chr2 86896527 86896822 -163791032 - AluSx SINE Alu -15 297 1 626 175 150 87 chr2 86896822 86897001 -163790853 - L1MDa LINE L1 -4961 1579 1374 2040 136 3 0 chr2 86897006 86897307 -163790547 - AluSq SINE Alu -11 302 1 512 213 73 0 chr2 86897636 86897786 -163790068 + L1ME1 LINE L1 5236 5396 -750 1526 68 0 15 chr2 86897841 86898047 -163789807 - L1PA8 LINE L1 0 6172 5970 1733 175 64 3 chr2 86898075 86898418 -163789436 - MLT1A1 LTR MaLR 0 365 2 198 103 0 0 chr2 86898735 86898764 -163789090 + (A)n Simple_repeat Simple_repeat 1 29 0 719 260 85 21 chr2 86898907 86899142 -163788712 + L1ME1 LINE L1 5874 6123 -43 1929 61 0 4 chr2 86899143 86899374 -163788480 + AluY SINE Alu 67 296 -15 193 310 0 60 chr2 86899974 86900074 -163787780 + MIR SINE MIR 40 133 -75 2173 89 3 46 chr2 86900821 86901124 -163786730 - AluY SINE Alu -21 290 1 940 74 8 0 chr2 86901851 86901973 -163785881 - AluY SINE Alu -5 306 184 8583 59 0 7 chr2 86902086 86903215 -163784639 - L1P LINE L1 -4006 2140 1020 405 148 0 0 chr2 86904160 86904221 -163783633 - AluS SINE Alu -16 293 233 24 0 0 0 chr2 86904286 86904310 -163783544 + AT_rich Low_complexity Low_complexity 1 24 0 3705 87 4 5 chr2 86905660 86906215 -163781639 - L1P LINE L1 -2722 3424 2871 438 242 0 22 chr2 86906627 86906718 -163781136 + MER5A DNA MER1_type 7 95 -94 343 300 60 7 chr2 86906858 86907008 -163780846 - L2 LINE L2 -717 2597 2440 1674 143 18 7 chr2 86909064 86909343 -163778511 - AluJb SINE Alu -15 297 16 203 252 39 117 chr2 86911833 86911936 -163775918 - L2 LINE L2 0 3272 3178 608 200 0 32 chr2 86912287 86912412 -163775442 + MER58 DNA MER1_type 2 122 -2298 838 279 118 64 chr2 86913082 86913505 -163774349 - MLT1L LTR MaLR -169 446 1 472 258 145 0 chr2 86913724 86913848 -163774006 - MIR SINE MIR -95 167 26 838 101 11 227 chr2 86914084 86914272 -163773582 - L1MC3 LINE L1 -7 7778 7551 1575 184 38 0 chr2 86914272 86914560 -163773294 - AluJb SINE Alu -13 299 1 838 101 11 227 chr2 86914560 86914615 -163773239 - L1MC3 LINE L1 -234 7551 7598 2262 103 0 3 chr2 86914615 86914927 -163772927 - AluSp SINE Alu -2 311 1 838 101 11 227 chr2 86914927 86914960 -163772894 - L1MC3 LINE L1 -186 7599 7561 983 147 11 33 chr2 86914984 86915168 -163772686 - AluSg/x SINE Alu -19 293 114 4787 99 27 83 chr2 86915294 86916233 -163771621 - SVA Other Other -69 1317 432 227 308 121 0 chr2 86916687 86916778 -163771076 + MIR3 SINE MIR 15 116 -92 578 271 91 15 chr2 86916836 86917035 -163770819 - MIR SINE MIR 0 262 49 253 281 7 37 chr2 86917371 86917506 -163770348 + CT-rich Low_complexity Low_complexity 2 132 0 265 226 107 12 chr2 86917677 86917761 -163770093 - MIR SINE MIR -105 157 66 379 244 0 0 chr2 86917784 86917862 -163769992 - MIR SINE MIR -56 206 129 465 259 76 122 chr2 86917870 86918214 -163769640 + L1M4 LINE L1 4502 4829 -1317 442 318 152 5 chr2 86919589 86919806 -163768048 - MIR SINE MIR 0 262 14 634 196 34 14 chr2 86919880 86920028 -163767826 + Tigger7 DNA MER2_type 45 195 -538 806 188 32 0 chr2 86920157 86920311 -163767543 - L1MC4a LINE L1 -195 7613 7455 855 139 0 0 chr2 86920323 86920460 -163767394 - FRAM SINE Alu 0 40 1 754 172 8 8 chr2 86920467 86920589 -163767265 - FLAM_C SINE Alu -20 123 2 806 172 16 70 chr2 86920589 86920775 -163767079 - FRAM SINE Alu -1 175 1 332 226 0 0 chr2 86920775 86920837 -163767017 - L1MC4 LINE L1 -491 7551 7490 285 172 62 0 chr2 86920837 86920901 -163766953 + MADE1 DNA Mariner 1 68 -12 624 212 85 42 chr2 86920907 86921096 -163766758 - L1MC4 LINE L1 -555 7487 7291 338 135 4 0 chr2 86921106 86921162 -163766692 - FLAM SINE Alu -15 118 74 2464 225 34 9 chr2 86921414 86921982 -163765872 - MER119 DNA MER1_type -1 582 1 405 167 18 79 chr2 86922109 86922223 -163765631 - MER104 DNA Tc2 -73 107 1 21 0 0 0 chr2 86923013 86923034 -163764820 + AT_rich Low_complexity Low_complexity 1 21 0 47 0 0 0 chr2 86923086 86923133 -163764721 + AT_rich Low_complexity Low_complexity 1 47 0 360 130 0 0 chr2 86923424 86923493 -163764361 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 784 184 196 29 chr2 86923539 86923784 -163764070 + MLT1D LTR MaLR 74 359 -146 216 136 23 23 chr2 86923790 86923834 -163764020 - MER5A DNA MER1_type -142 47 4 935 317 32 17 chr2 86925260 86925676 -163762178 - L1M2b LINE L1 -6472 737 1 261 309 21 21 chr2 86925990 86926084 -163761770 - L2 LINE L2 0 3313 3220 777 161 8 0 chr2 86926565 86926683 -163761171 - AluSq/x SINE Alu -193 120 2 342 98 0 0 chr2 86927062 86927113 -163760741 + (TC)n Simple_repeat Simple_repeat 1 51 0 437 284 114 25 chr2 86927605 86927806 -163760048 - L2 LINE L2 0 3313 3095 385 333 0 0 chr2 86927915 86928074 -163759780 + A-rich Low_complexity Low_complexity 1 159 0 2033 36 0 9 chr2 86928088 86928331 -163759523 - L1PA4 LINE L1 -138 6017 5776 1678 102 121 11 chr2 86928331 86928596 -163759258 - AluSg SINE Alu -16 294 1 317 237 0 0 chr2 86928649 86928708 -163759146 + MER82 DNA MER2_type 1 59 -594 1322 158 6 73 chr2 86928835 86929164 -163758690 + AluJb SINE Alu 1 307 -5 198 206 0 0 chr2 86929583 86929646 -163758208 + G-rich Low_complexity Low_complexity 1 63 0 236 326 0 0 chr2 86929659 86929757 -163758097 + G-rich Low_complexity Low_complexity 1 98 0 526 290 159 7 chr2 86930801 86930939 -163756915 - MER91A DNA MER1_type -1 195 37 596 204 35 12 chr2 86931317 86931489 -163756365 - Charlie7 DNA MER1_type -3 2609 2434 381 190 18 20 chr2 86932935 86933046 -163754808 + AluS SINE Alu 1 62 -239 261 357 0 19 chr2 86933302 86933456 -163754398 + C-rich Low_complexity Low_complexity 4 154 0 4648 199 39 63 chr2 86933612 86935015 -163752839 - L1 LINE L1 -1217 4929 3561 6050 136 14 35 chr2 86935371 86936330 -163751524 - Tigger1 DNA MER2_type -1 2417 1479 2376 7 4 0 chr2 86936330 86936599 -163751255 - AluYa5 SINE Alu -5 306 37 6050 136 14 35 chr2 86936599 86936675 -163751179 - Tigger1 DNA MER2_type -939 1479 1403 964 286 63 41 chr2 86936807 86937308 -163750546 - L1MCc LINE L1 -4814 2129 1553 1645 167 7 20 chr2 86937308 86937602 -163750252 - AluJb SINE Alu -22 290 1 964 286 63 41 chr2 86937602 86937997 -163749857 - L1MCc LINE L1 -5390 1553 1168 243 196 214 0 chr2 86938375 86938431 -163749423 + MIR SINE MIR 183 250 -12 275 339 110 0 chr2 86938733 86938851 -163749003 - L2 LINE L2 -3 3269 3139 474 152 162 9 chr2 86939012 86939117 -163748737 - MER5B DNA MER1_type -51 127 7 267 339 112 33 chr2 86939226 86939347 -163748507 - L2 LINE L2 -427 2887 2777 369 0 0 0 chr2 86939347 86939388 -163748466 + (CA)n Simple_repeat Simple_repeat 1 41 0 267 339 112 33 chr2 86939388 86939632 -163748222 - L2 LINE L2 -537 2777 2493 295 196 29 29 chr2 86939799 86939901 -163747953 + AluSp SINE Alu 2 103 -200 1030 126 106 25 chr2 86940694 86940892 -163746962 - L1PB1 LINE L1 -31 6120 5907 3117 123 10 87 chr2 86943432 86943916 -163743938 - L1MB4 LINE L1 -67 6113 5684 2405 55 13 0 chr2 86943916 86944225 -163743629 - AluSp SINE Alu 0 313 1 3117 123 10 87 chr2 86944225 86944350 -163743504 - L1MB4 LINE L1 -496 5684 5551 706 77 10 0 chr2 86944368 86944472 -163743382 - L1MA2 LINE L1 0 6304 6200 2406 112 31 25 chr2 86944810 86945168 -163742686 + THE1B LTR MaLR 5 364 0 1133 172 68 11 chr2 86945210 86945606 -163742248 - MLT1D LTR MaLR 0 505 1 363 315 177 42 chr2 86945992 86946376 -163741478 - L2 LINE L2 -1 3271 2836 299 244 222 51 chr2 86946622 86946856 -163740998 - L2 LINE L2 -1005 2309 2036 1628 157 7 33 chr2 86946893 86947193 -163740661 + AluJo SINE Alu 7 298 -14 383 59 20 0 chr2 86947627 86947678 -163740176 + Alu SINE Alu 1 52 -248 225 65 0 0 chr2 86947855 86947886 -163739968 + (CA)n Simple_repeat Simple_repeat 2 32 0 1187 271 27 70 chr2 86948968 86949535 -163738319 + L2 LINE L2 2772 3313 0 288 260 39 0 chr2 86949557 86949634 -163738220 - MER116 DNA Mariner 0 80 1 362 143 0 0 chr2 86951215 86951271 -163736583 - Tigger1 DNA MER2_type -1236 1182 1127 227 0 0 0 chr2 86951273 86951299 -163736555 - Tigger1 DNA MER2_type -1260 1158 1133 1744 110 99 14 chr2 86951299 86951581 -163736273 - Tigger1 DNA MER2_type -1252 1166 861 1956 143 262 5 chr2 86951591 86952003 -163735851 - Tigger1 DNA MER2_type -1750 668 151 309 208 0 0 chr2 86952326 86952398 -163735456 + G-rich Low_complexity Low_complexity 1 72 0 3307 122 45 36 chr2 86952581 86953130 -163734724 - MER21A LTR ERV1 -2 929 376 798 175 226 9 chr2 86953135 86953352 -163734502 - MER21A LTR ERV1 -667 264 1 340 247 103 0 chr2 86955232 86955329 -163732525 + MIR SINE MIR 156 262 0 195 69 0 0 chr2 86956171 86956200 -163731654 + (A)n Simple_repeat Simple_repeat 1 29 0 189 107 0 0 chr2 86956914 86956942 -163730912 + (A)n Simple_repeat Simple_repeat 1 28 0 1559 147 4 13 chr2 86957456 86957694 -163730160 - AluSx SINE Alu -76 236 1 22 0 0 0 chr2 86958240 86958262 -163729592 + AT_rich Low_complexity Low_complexity 1 22 0 310 300 125 28 chr2 86958489 86958776 -163729078 + L2 LINE L2 2244 2558 -756 2725 89 3 19 chr2 86958998 86959368 -163728486 + THE1B LTR MaLR 1 364 0 851 290 94 34 chr2 86959368 86960050 -163727804 + L2 LINE L2 2580 3313 0 2515 145 34 74 chr2 86961507 86962101 -163725753 + MER4B LTR ERV1 1 570 -40 22 0 0 0 chr2 86962291 86962313 -163725541 + GC_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 86962623 86962649 -163725205 + AT_rich Low_complexity Low_complexity 1 26 0 2100 116 3 3 chr2 86962976 86963268 -163724586 + AluSx SINE Alu 1 292 -20 278 275 12 12 chr2 86963631 86963711 -163724143 + L2 LINE L2 3189 3268 -4 522 270 179 5 chr2 86963960 86964156 -163723698 - MIR SINE MIR -31 231 2 307 231 13 13 chr2 86964499 86964577 -163723277 + MER116 DNA Mariner 2 79 -1 206 227 0 76 chr2 86964666 86964732 -163723122 + L2 LINE L2 3207 3267 -5 1765 203 0 0 chr2 86965604 86965914 -163721940 - AluJo SINE Alu -2 310 1 362 62 0 0 chr2 86965915 86965963 -163721891 - AluSq/x SINE Alu -169 134 87 1108 211 0 47 chr2 86965963 86966195 -163721659 - AluJo SINE Alu -91 221 1 214 282 65 32 chr2 86966197 86966321 -163721533 + L2 LINE L2 2311 2438 -876 2279 92 7 0 chr2 86966354 86966649 -163721205 - AluSp SINE Alu -16 297 1 195 100 0 0 chr2 86966835 86966865 -163720989 + (A)n Simple_repeat Simple_repeat 1 30 0 288 233 35 58 chr2 86966886 86966972 -163720882 + MER94 DNA DNA 47 130 -4 466 308 13 62 chr2 86967510 86967737 -163720117 + MER102b DNA MER1_type 126 341 0 21 71 0 0 chr2 86968169 86968211 -163719643 + AT_rich Low_complexity Low_complexity 1 42 0 1202 176 22 62 chr2 86968454 86968726 -163719128 + L1PA15-16 LINE L1 2300 2560 -4289 2245 101 3 7 chr2 86968747 86969045 -163718809 + AluSq SINE Alu 1 297 -16 415 94 47 0 chr2 86969053 86969117 -163718737 - MLT1B LTR MaLR -309 81 15 307 177 0 32 chr2 86969265 86969327 -163718527 - L2 LINE L2 -40 3232 3173 653 271 124 23 chr2 86969328 86969664 -163718190 - MLT1I LTR MaLR -5 404 34 1825 139 0 58 chr2 86969742 86970036 -163717818 - AluJo SINE Alu -35 277 1 247 260 29 115 chr2 86970053 86970157 -163717697 - MIR SINE MIR -130 132 38 1282 91 0 17 chr2 86970480 86970655 -163717199 - AluSx SINE Alu -138 174 3 435 222 0 19 chr2 86971189 86971351 -163716503 + (TG)n Simple_repeat Simple_repeat 1 159 0 836 170 26 0 chr2 86972407 86972560 -163715294 + AluJb SINE Alu 127 283 -29 213 39 0 0 chr2 86972562 86972588 -163715266 + (GA)n Simple_repeat Simple_repeat 1 26 0 426 103 51 39 chr2 86973721 86973799 -163714055 + AluJ/FRAM SINE Alu 228 306 -6 358 127 139 38 chr2 86974815 86974894 -163712960 - AluSq SINE Alu -122 181 95 22 0 0 0 chr2 86976100 86976122 -163711732 + AT_rich Low_complexity Low_complexity 1 22 0 568 252 72 66 chr2 86976135 86976512 -163711342 - L1ME4a LINE L1 -10 6094 5716 4276 245 38 17 chr2 86976905 86978276 -163709578 - L1ME4a LINE L1 -2607 3522 2123 579 210 49 43 chr2 86979641 86979803 -163708051 + MIR SINE MIR 84 246 -16 2977 208 56 13 chr2 86980163 86980775 -163707079 + MER82 DNA MER2_type 2 639 -14 427 218 228 16 chr2 86980916 86981109 -163706745 - HAL1 LINE L1 -614 1876 1643 348 89 71 0 chr2 86981110 86981166 -163706688 - AluSc SINE Alu 0 299 240 1770 122 0 0 chr2 86981330 86981567 -163706287 - AluSx SINE Alu -75 237 1 22 35 0 0 chr2 86982574 86982603 -163705251 + AT_rich Low_complexity Low_complexity 1 29 0 2208 49 10 35 chr2 86982608 86982927 -163704927 + AluY SINE Alu 1 312 0 3221 137 70 66 chr2 86984261 86984985 -163702869 + LTR8A LTR ERV1 1 727 0 286 326 92 33 chr2 86985616 86985773 -163702081 - L1ME4a LINE L1 -5478 641 470 2006 129 3 7 chr2 86985773 86986075 -163701779 - AluSp SINE Alu -12 301 1 286 326 92 33 chr2 86986075 86986101 -163701753 - L1ME4a LINE L1 -5649 470 447 389 315 65 22 chr2 86986544 86986962 -163700892 - L1MEd LINE L1 -857 1633 1112 831 130 0 43 chr2 86986963 86987101 -163700753 + FLAM_C SINE Alu 2 133 0 956 166 12 6 chr2 86987854 86988017 -163699837 - FRAM SINE Alu -16 160 1 1343 157 25 42 chr2 86988760 86989046 -163698808 + AluJb SINE Alu 2 282 -30 181 273 30 15 chr2 86990172 86990238 -163697616 + L2 LINE L2 3246 3312 -1 394 280 60 12 chr2 86990414 86990582 -163697272 - MIR SINE MIR -13 249 74 207 234 47 0 chr2 86991216 86991280 -163696574 + (CA)n Simple_repeat Simple_repeat 1 67 0 22 0 0 0 chr2 86991514 86991536 -163696318 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr2 86991636 86991663 -163696191 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr2 86991744 86991765 -163696089 + GC_rich Low_complexity Low_complexity 1 21 0 5006 162 27 12 chr2 86992194 86993187 -163694667 - L1MB3 LINE L1 0 6183 5173 322 302 88 24 chr2 86993708 86993913 -163693941 + L2 LINE L2 2245 2462 -852 272 328 38 76 chr2 86994375 86994613 -163693241 - L2 LINE L2 -19 3253 3025 1188 134 0 6 chr2 86994634 86994813 -163693041 + L1PB1 LINE L1 5813 5990 -161 275 338 30 45 chr2 86995414 86995547 -163692307 + L2 LINE L2 2944 3074 -198 1400 270 116 22 chr2 86995653 86996298 -163691556 + L2 LINE L2 2336 3038 -275 508 108 0 0 chr2 86996428 86996502 -163691352 + AluSp/q SINE Alu 228 301 -12 224 303 0 0 chr2 86996502 86996578 -163691276 + MIR SINE MIR 171 246 -16 427 278 40 21 chr2 86996682 86996897 -163690957 - MIR SINE MIR 0 262 45 1864 122 49 0 chr2 86996930 86997193 -163690661 - AluSx SINE Alu -36 276 1 8645 116 11 10 chr2 86997956 86999254 -163688600 - HSMAR2 DNA Mariner 0 1302 4 180 231 154 55 chr2 86999786 86999968 -163687886 - L2 LINE L2 -2 3311 3112 885 151 0 0 chr2 87001123 87001249 -163686605 - FLAM_C SINE Alu -17 126 1 257 245 179 28 chr2 87001423 87001529 -163686325 + MARNA DNA Mariner 126 247 -339 2115 100 0 7 chr2 87002007 87002276 -163685578 - AluSx SINE Alu -45 267 1 1072 184 0 0 chr2 87002300 87002468 -163685386 - AluJb SINE Alu -13 299 132 276 149 0 0 chr2 87002468 87002515 -163685339 + (TG)n Simple_repeat Simple_repeat 1 47 0 35 0 0 0 chr2 87002516 87002551 -163685303 + AT_rich Low_complexity Low_complexity 1 35 0 627 51 57 40 chr2 87002551 87002728 -163685126 + (TA)n Simple_repeat Simple_repeat 1 180 0 232 200 40 0 chr2 87003279 87003329 -163684525 + C-rich Low_complexity Low_complexity 6 57 0 531 0 0 0 chr2 87003637 87003696 -163684158 + (GA)n Simple_repeat Simple_repeat 2 60 0 407 269 58 24 chr2 87003838 87004046 -163683808 - L2 LINE L2 -8 3305 3091 1913 128 60 13 chr2 87004046 87004318 -163683536 + AluJo SINE Alu 1 290 -22 208 0 0 0 chr2 87004318 87004341 -163683513 + (TAA)n Simple_repeat Simple_repeat 2 180 0 1913 128 60 13 chr2 87004341 87004366 -163683488 + AluJo SINE Alu 290 312 0 1118 105 52 0 chr2 87004604 87004757 -163683097 + AluSx SINE Alu 1 161 -151 243 121 0 45 chr2 87006486 87006552 -163681302 + (TCCCC)n Simple_repeat Simple_repeat 5 67 0 323 216 15 30 chr2 87006611 87006745 -163681109 + C-rich Low_complexity Low_complexity 6 137 0 964 284 92 28 chr2 87007896 87008569 -163679285 - L2 LINE L2 -3 3310 2595 2096 116 3 7 chr2 87009014 87009320 -163678534 + AluSx SINE Alu 1 305 0 818 196 55 30 chr2 87009663 87009862 -163677992 + MLT1A1 LTR MaLR 162 365 0 936 271 125 15 chr2 87009864 87010329 -163677525 - L2 LINE L2 -2036 1278 763 503 304 0 12 chr2 87010339 87010500 -163677354 - MIR SINE MIR -86 176 18 257 248 106 35 chr2 87011034 87011147 -163676707 + L2 LINE L2 3180 3300 -13 340 237 52 21 chr2 87011687 87011784 -163676070 - MER81 DNA DNA -14 100 1 514 216 220 26 chr2 87014571 87014844 -163673010 + L1MC4a LINE L1 5568 5893 -1915 1101 200 14 9 chr2 87014855 87015070 -163672784 + MER58A DNA MER1_type 9 224 0 22 0 0 0 chr2 87015337 87015359 -163672495 + AT_rich Low_complexity Low_complexity 1 22 0 2087 121 7 3 chr2 87015539 87015829 -163672025 - AluSx SINE Alu -21 291 1 2041 132 9 28 chr2 87016942 87017261 -163670593 + AluSq SINE Alu 1 313 0 190 333 32 32 chr2 87017530 87017623 -163670231 + L2 LINE L2 2985 3077 -195 21 36 0 0 chr2 87017685 87017713 -163670141 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 87017831 87017852 -163670002 + AT_rich Low_complexity Low_complexity 1 21 0 375 232 30 20 chr2 87018658 87018757 -163669097 + L1MC4 LINE L1 7768 7867 -175 516 212 68 17 chr2 87019607 87019725 -163668129 + FLAM_A SINE Alu 4 127 -6 260 242 32 0 chr2 87020540 87020602 -163667252 - tRNA-Met-i tRNA tRNA -10 65 2 839 181 111 0 chr2 87023738 87023909 -163663945 + MER20 DNA MER1_type 30 219 0 222 37 0 0 chr2 87023912 87023939 -163663915 + (TC)n Simple_repeat Simple_repeat 2 28 0 193 276 22 45 chr2 87025939 87026073 -163661781 - L2 LINE L2 -91 3222 3092 1859 162 7 0 chr2 87027250 87027558 -163660296 - AluJo SINE Alu -2 310 1 290 244 24 0 chr2 87028402 87028484 -163659370 - MIR3 SINE MIR -20 188 105 261 343 0 19 chr2 87029557 87029665 -163658189 + GA-rich Low_complexity Low_complexity 4 109 0 180 293 0 0 chr2 87029683 87029724 -163658130 - MIR SINE MIR -117 91 51 188 257 0 81 chr2 87030212 87030286 -163657568 - MIR SINE MIR -85 177 110 560 136 45 0 chr2 87030728 87030816 -163657038 - FLAM_A SINE Alu -28 114 23 2115 121 3 0 chr2 87031331 87031621 -163656233 - AluJb SINE Alu -21 291 1 1565 185 0 30 chr2 87031878 87032180 -163655674 - AluJb SINE Alu -18 294 2 1129 114 0 0 chr2 87032822 87032971 -163654883 - AluSc SINE Alu -160 149 1 2046 101 37 14 chr2 87032980 87033276 -163654578 - AluSc SINE Alu -6 303 1 811 184 0 0 chr2 87033995 87034120 -163653734 + FLAM_C SINE Alu 1 125 -18 435 274 32 16 chr2 87034140 87034264 -163653590 - L2 LINE L2 0 3313 3188 27 0 0 0 chr2 87034285 87034312 -163653542 + AT_rich Low_complexity Low_complexity 1 27 0 1014 200 49 5 chr2 87034326 87034531 -163653323 - AluJo SINE Alu -22 290 77 844 274 91 21 chr2 87034654 87035452 -163652402 - HAL1 LINE L1 -1593 914 3 2131 139 14 28 chr2 87036452 87036812 -163651042 - L1PA16 LINE L1 0 6166 5812 675 236 92 53 chr2 87037070 87037485 -163650369 - L1MEc LINE L1 -2879 4062 3632 5964 134 13 1 chr2 87037509 87038421 -163649433 - L1PA16 LINE L1 -9 6157 5236 723 289 61 18 chr2 87038419 87038748 -163649106 - L1MEc LINE L1 -3346 3595 3253 * 551 175 77 38 chr2 87038749 87038932 -163648922 - L1MEc LINE L1 -4210 2912 2723 445 300 91 53 chr2 87039189 87039586 -163648268 - L1MEc LINE L1 -5213 1210 799 264 264 28 107 chr2 87039624 87039802 -163648052 - L1MEc LINE L1 -5592 831 668 693 210 159 26 chr2 87040206 87040401 -163647453 - MER82 DNA MER2_type -155 498 278 507 174 51 0 chr2 87040851 87040949 -163646905 + LTR8A LTR ERV1 1 103 -624 21 0 0 0 chr2 87041174 87041195 -163646659 + AT_rich Low_complexity Low_complexity 1 21 0 1260 175 26 30 chr2 87041579 87041813 -163646041 + LTR8 LTR ERV1 457 689 -2 1728 181 13 3 chr2 87041815 87042113 -163645741 - MER82 DNA MER2_type -351 302 2 1231 153 263 15 chr2 87042131 87042470 -163645384 + LTR49 LTR ERV1 1 423 -172 * 1544 215 17 100 chr2 87042465 87042925 -163644929 - LTR8 LTR ERV1 -11 680 259 815 135 0 0 chr2 87043647 87043758 -163644096 + FLAM_C SINE Alu 1 111 -32 22 35 0 0 chr2 87043764 87043793 -163644061 + AT_rich Low_complexity Low_complexity 1 29 0 921 209 5 21 chr2 87045059 87045246 -163642608 + MER20 DNA MER1_type 31 214 -5 183 207 0 52 chr2 87045627 87045685 -163642169 - L2 LINE L2 0 3313 3259 437 293 41 14 chr2 87045781 87045928 -163641926 - MER5A DNA MER1_type -38 151 1 377 286 18 48 chr2 87047011 87047179 -163640675 + MIR SINE MIR 21 183 -79 627 266 77 19 chr2 87047287 87047494 -163640360 + MIR SINE MIR 2 220 -42 1922 271 167 9 chr2 87047497 87048382 -163639472 + L2 LINE L2 1253 2277 -1037 1507 147 0 72 chr2 87048608 87048915 -163638939 - AluJb SINE Alu -6 306 22 276 169 56 56 chr2 87048939 87049010 -163638844 - L1P LINE L1 -1096 5050 4980 7614 28 0 0 chr2 87049019 87050525 -163637329 - L1PA3 LINE L1 -4 6151 4641 1103 23 8 0 chr2 87050525 87050658 -163637196 - L1PA3 LINE L1 -3817 2329 2196 433 262 35 28 chr2 87050863 87051004 -163636850 + MIR SINE MIR 119 260 -2 217 151 68 14 chr2 87051005 87051078 -163636776 + (TTATA)n Simple_repeat Simple_repeat 4 80 0 997 279 138 12 chr2 87051376 87051802 -163636052 - L2 LINE L2 -1057 2257 1778 186 375 114 17 chr2 87051811 87052048 -163635806 - L2 LINE L2 -52 3220 2961 218 250 0 0 chr2 87052106 87052158 -163635696 + L2 LINE L2 3215 3266 -6 2248 101 3 7 chr2 87052284 87052590 -163635264 + AluSc SINE Alu 1 305 -4 190 242 113 32 chr2 87052666 87052728 -163635126 + L2 LINE L2 3208 3274 -39 267 31 0 0 chr2 87052860 87052892 -163634962 + (GA)n Simple_repeat Simple_repeat 1 32 0 330 244 93 70 chr2 87054244 87054514 -163633340 - L1MC5 LINE L1 -74 7887 7612 513 185 0 0 chr2 87055487 87055606 -163632248 + CT-rich Low_complexity Low_complexity 1 119 0 10867 74 14 18 chr2 87056176 87058411 -163629443 + L1PA7 LINE L1 3866 6090 -64 1663 144 13 20 chr2 87058540 87058846 -163629008 + AluSx SINE Alu 1 304 -8 1987 109 32 0 chr2 87059022 87059306 -163628548 + AluSg SINE Alu 2 294 -16 252 0 0 0 chr2 87059575 87059603 -163628251 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1209 181 4 39 chr2 87059611 87059892 -163627962 - AluJo SINE Alu -37 275 5 2332 46 0 0 chr2 87060225 87060535 -163627319 + AluY SINE Alu 1 310 0 1161 216 92 10 chr2 87060719 87061024 -163626830 + MER58B DNA MER1_type 9 338 -3 1950 113 7 7 chr2 87062801 87063111 -163624743 - AluSx SINE Alu 0 311 2 181 192 289 0 chr2 87065708 87065760 -163622094 + MER5C DNA MER1_type 253 319 -5 1032 55 0 73 chr2 87066528 87066692 -163621162 + FRAM SINE Alu 25 176 0 1141 239 156 32 chr2 87066751 87067161 -163620693 + MLT1J LTR MaLR 1 461 -50 271 303 126 0 chr2 87067420 87067539 -163620315 + MER5A DNA MER1_type 7 140 -49 24 32 0 0 chr2 87067539 87067570 -163620284 + AT_rich Low_complexity Low_complexity 1 31 0 1005 41 8 0 chr2 87067570 87067692 -163620162 - AluY SINE Alu -188 123 1 2097 92 0 43 chr2 87067692 87067996 -163619858 - AluSx SINE Alu -20 292 2 417 207 33 0 chr2 87068065 87068163 -163619691 + MER5A DNA MER1_type 4 105 -84 23 0 0 0 chr2 87068688 87068711 -163619143 + AT_rich Low_complexity Low_complexity 1 23 0 5761 104 81 82 chr2 87069651 87070773 -163617081 + Tigger3b DNA MER2_type 111 1231 0 200 291 105 8 chr2 87070773 87070885 -163616969 + MIR SINE MIR 78 201 -7 359 80 40 0 chr2 87072432 87072482 -163615372 + Tigger3(Golem) DNA MER2_type 39 90 -2939 615 280 57 5 chr2 87072874 87073067 -163614787 - MIR SINE MIR -48 214 12 1830 145 0 13 chr2 87073240 87073543 -163614311 - AluY SINE Alu -12 299 1 336 257 61 27 chr2 87073552 87073692 -163614162 - MIR SINE MIR -65 143 56 313 256 0 15 chr2 87073935 87074068 -163613786 + GA-rich Low_complexity Low_complexity 3 133 0 22 0 0 0 chr2 87074114 87074136 -163613718 + AT_rich Low_complexity Low_complexity 1 22 0 556 294 17 17 chr2 87074414 87074591 -163613263 - MIR SINE MIR -12 250 74 1537 222 97 8 chr2 87075157 87075540 -163612314 - MER63B DNA MER1_type -19 417 1 528 249 42 27 chr2 87075938 87076135 -163611719 - L1ME LINE L1 -453 5668 5472 21 0 0 0 chr2 87076192 87076213 -163611641 + AT_rich Low_complexity Low_complexity 1 21 0 739 86 0 0 chr2 87076362 87076455 -163611399 - AluSq/x SINE Alu -206 107 15 368 89 0 18 chr2 87076455 87076511 -163611343 - MLT1C LTR MaLR -349 118 64 1823 90 0 12 chr2 87076613 87076869 -163610985 + L1PB1 LINE L1 5897 6149 -2 644 139 15 29 chr2 87076882 87077019 -163610835 + L1PA13 LINE L1 1965 2099 -4688 2337 46 0 0 chr2 87077019 87077342 -163610512 + AluY SINE Alu 1 323 0 640 295 82 19 chr2 87077356 87077722 -163610132 - L1ME4a LINE L1 -216 5905 5517 675 240 20 0 chr2 87077839 87077985 -163609869 - MER5A DNA MER1_type -2 187 39 1853 159 3 0 chr2 87078326 87078628 -163609226 + AluJb SINE Alu 5 307 -5 700 147 39 8 chr2 87078655 87078784 -163609070 + L1M4 LINE L1 5476 5608 -576 737 198 0 0 chr2 87078787 87078908 -163608946 + FLAM_C SINE Alu 5 125 -8 1278 106 17 0 chr2 87078930 87079110 -163608744 + AluSq SINE Alu 1 183 -130 333 297 80 105 chr2 87080065 87080351 -163607503 + L2 LINE L2 2994 3272 0 194 342 7 59 chr2 87080442 87080594 -163607260 - L2 LINE L2 -4 3309 3166 398 332 114 49 chr2 87081231 87082149 -163605705 + L2 LINE L2 1288 2265 -1049 215 286 0 26 chr2 87082210 87082287 -163605567 + CT-rich Low_complexity Low_complexity 2 76 0 389 291 60 15 chr2 87083460 87083594 -163604260 - MIR3 SINE MIR -3 205 66 698 281 0 29 chr2 87083835 87084006 -163603848 + MER5B DNA MER1_type 1 166 -12 2269 92 0 3 chr2 87084639 87084944 -163602910 + AluSg SINE Alu 1 304 -6 303 261 80 0 chr2 87086916 87087004 -163600850 - MIR SINE MIR -34 228 134 1890 134 20 10 chr2 87087542 87087848 -163600006 + AluSx SINE Alu 2 310 -2 213 302 63 0 chr2 87087906 87087969 -163599885 + MER91A DNA MER1_type 116 182 -14 776 90 180 0 chr2 87088897 87089019 -163598835 + MER30 DNA MER1_type 1 144 -86 562 314 47 0 chr2 87089806 87089975 -163597879 + MIR SINE MIR 61 237 -25 184 316 92 0 chr2 87089999 87090075 -163597779 + L2 LINE L2 1374 1456 -1858 1787 189 15 3 chr2 87090166 87090494 -163597360 - L1PB4 LINE L1 -13 6143 5812 319 200 67 0 chr2 87092682 87092757 -163595097 - MER3 DNA MER1_type 0 209 130 352 274 49 24 chr2 87093428 87093592 -163594262 + L1ME4a LINE L1 5708 5875 -246 21 36 0 0 chr2 87093599 87093627 -163594227 + AT_rich Low_complexity Low_complexity 1 28 0 270 251 46 88 chr2 87093786 87093995 -163593859 - L1M4 LINE L1 -2153 3993 3791 202 298 105 18 chr2 87094124 87094238 -163593616 - MIR SINE MIR -58 204 81 317 239 34 0 chr2 87094836 87094924 -163592930 - MER94 DNA DNA -2 132 42 1285 267 80 26 chr2 87094998 87095623 -163592231 + L2 LINE L2 2480 3140 -173 1334 111 0 99 chr2 87096359 87096602 -163591252 - AluSx SINE Alu -93 219 1 303 209 11 77 chr2 87096655 87096746 -163591108 + L1MC4 LINE L1 6613 6697 -1345 365 159 171 0 chr2 87096769 87096857 -163590997 + L1MC/D LINE L1 5406 5508 -2300 821 160 64 13 chr2 87096860 87097016 -163590838 + AluJb SINE Alu 123 286 -26 602 285 140 0 chr2 87097037 87097244 -163590610 - L2 LINE L2 -246 3067 2832 1856 220 55 53 chr2 87097256 87097769 -163590085 - LTR40a LTR ERVL -5 514 1 298 230 115 0 chr2 87097769 87097856 -163589998 - L2 LINE L2 -491 2823 2727 688 203 0 15 chr2 87098268 87098401 -163589453 - FLAM_C SINE Alu -1 132 2 1474 177 37 20 chr2 87098410 87098709 -163589145 - AluJo SINE Alu -8 304 1 1539 181 67 11 chr2 87098710 87099292 -163588562 - L1MC/D LINE L1 -743 5403 4863 237 244 61 87 chr2 87100449 87100564 -163587290 - L2 LINE L2 -5 3267 3156 1579 143 210 9 chr2 87100822 87101150 -163586704 + MSTD LTR MaLR 3 396 0 269 290 0 0 chr2 87101192 87101254 -163586600 - AluJb SINE Alu -135 167 106 1071 296 92 39 chr2 87101811 87102758 -163585096 + L2 LINE L2 2302 3305 -8 281 277 28 35 chr2 87103218 87103359 -163584495 + GA-rich Low_complexity Low_complexity 1 140 0 803 241 0 0 chr2 87103361 87103502 -163584352 + MER45A DNA AcHobo 32 172 -6 442 276 30 15 chr2 87103881 87104015 -163583839 - MER5B DNA MER1_type -35 143 8 1697 146 0 29 chr2 87104195 87104503 -163583351 - AluJo SINE Alu -13 299 1 862 86 0 16 chr2 87104503 87104631 -163583223 + L1MB8 LINE L1 6048 6173 -5 242 299 179 0 chr2 87104717 87104834 -163583020 - L2 LINE L2 -222 3050 2913 195 42 0 0 chr2 87105000 87105024 -163582830 + (TCC)n Simple_repeat Simple_repeat 1 24 0 371 73 18 0 chr2 87105147 87105202 -163582652 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 271 254 15 0 chr2 87105204 87105271 -163582583 - AluJ/FRAM SINE Alu -2 300 233 320 253 140 13 chr2 87305288 87305496 -163382358 - L1M4 LINE L1 -744 5402 5153 2177 77 0 17 chr2 87305516 87305827 -163382027 - AluY SINE Alu 0 306 1 25 31 0 0 chr2 87306466 87306498 -163381356 + AT_rich Low_complexity Low_complexity 1 32 0 199 192 77 19 chr2 87306821 87306873 -163380981 - L3 LINE CR1 -1088 489 435 241 289 89 52 chr2 87306934 87307069 -163380785 - L2 LINE L2 -505 2809 2670 972 236 73 68 chr2 87307278 87307731 -163380123 + L1ME3A LINE L1 5685 6139 -31 183 326 52 22 chr2 87307762 87307897 -163379957 - L2 LINE L2 -1312 2002 1864 2343 61 0 3 chr2 87308497 87308794 -163379060 + AluY SINE Alu 1 296 -15 327 309 128 0 chr2 87308810 87308959 -163378895 - L1ME4a LINE L1 -2 6119 5952 337 289 72 61 chr2 87310159 87310339 -163377515 - L2 LINE L2 -12 3301 3120 752 118 0 0 chr2 87310595 87310697 -163377157 + AluJ/FLAM SINE Alu 1 102 -210 1451 206 31 9 chr2 87311254 87311574 -163376280 + MER47B DNA MER2_type 17 343 -75 1634 142 4 4 chr2 87311574 87311827 -163376027 - AluSx SINE Alu -4 308 56 1772 153 47 10 chr2 87311955 87312255 -163375599 - AluJo SINE Alu -1 311 1 24 0 0 29 chr2 87313820 87313832 -163374022 + AT_rich Low_complexity Low_complexity 1 12 -22 2296 103 0 0 chr2 87313832 87314124 -163373730 + AluSg SINE Alu 1 292 -18 24 0 0 29 chr2 87314124 87314146 -163373708 + AT_rich Low_complexity Low_complexity 12 34 0 1658 97 65 12 chr2 87314687 87314935 -163372919 + AluSx SINE Alu 1 261 -51 325 186 0 0 chr2 87315067 87315126 -163372728 + MER47B DNA MER2_type 336 394 -24 498 234 184 56 chr2 87316141 87316450 -163371404 - L1ME2 LINE L1 -10 6088 5735 1294 141 77 5 chr2 87316450 87316670 -163371184 - MER46A DNA MER2_type 0 236 1 498 234 184 56 chr2 87316670 87316681 -163371173 - L1ME2 LINE L1 -363 5735 5727 1170 253 31 27 chr2 87316702 87317093 -163370761 - L1ME2 LINE L1 -530 5568 5171 2572 53 0 0 chr2 87317093 87317393 -163370461 - AluY SINE Alu -11 300 1 1170 253 31 27 chr2 87317393 87317670 -163370184 - L1ME2 LINE L1 -927 5171 4897 701 177 67 30 chr2 87317679 87317843 -163370011 - MER68 LTR ERV1 -256 306 137 1025 277 54 30 chr2 87317856 87318297 -163369557 - L1ME2 LINE L1 -5520 550 99 562 178 204 7 chr2 87318317 87318469 -163369385 + MER58A DNA MER1_type 43 224 0 305 267 70 35 chr2 87318485 87318571 -163369283 - L1ME2 LINE L1 -5979 91 3 190 299 37 123 chr2 87318768 87318955 -163368899 - L2 LINE L2 0 3272 3102 827 145 8 0 chr2 87318988 87319112 -163368742 + AluSq/x SINE Alu 1 125 -187 1976 151 3 3 chr2 87319524 87319823 -163368031 + AluJb SINE Alu 5 303 -9 207 0 0 0 chr2 87319896 87319919 -163367935 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1258 149 50 0 chr2 87320044 87320266 -163367588 - L1MB2 LINE L1 -2 6169 5937 291 250 136 40 chr2 87320284 87320556 -163367298 - L1M4 LINE L1 -853 5293 4996 492 298 99 13 chr2 87320594 87320976 -163366878 - L1M4 LINE L1 -1237 4909 4495 2516 44 0 0 chr2 87321974 87322268 -163365586 - AluY SINE Alu -17 294 1 180 125 0 0 chr2 87322419 87322451 -163365403 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 2397 70 0 3 chr2 87323960 87324258 -163363596 - AluY SINE Alu -14 297 1 2459 76 0 3 chr2 87324403 87324707 -163363147 - AluY SINE Alu -6 305 3 2234 116 0 0 chr2 87324711 87325014 -163362840 - AluSx SINE Alu -9 303 1 309 313 145 35 chr2 87326164 87326474 -163361380 - L2 LINE L2 -5 3267 2924 1873 123 207 11 chr2 87327534 87327892 -163359962 - MSTA LTR MaLR 0 428 1 181 118 40 40 chr2 87328905 87328981 -163358873 + (TATAA)n Simple_repeat Simple_repeat 2 77 0 647 188 78 0 chr2 87330034 87330188 -163357666 - L1MB3 LINE L1 -9 6174 6009 298 181 42 0 chr2 87330191 87330263 -163357591 - L1MB3 LINE L1 -100 6083 6009 298 181 42 0 chr2 87330266 87330338 -163357516 - L1MB3 LINE L1 -100 6083 6009 298 181 42 0 chr2 87330341 87330413 -163357441 - L1MB3 LINE L1 -100 6083 6009 298 181 42 0 chr2 87330416 87330488 -163357366 - L1MB3 LINE L1 -100 6083 6009 347 319 76 14 chr2 87331043 87331187 -163356667 - MIR SINE MIR -56 206 54 2316 75 3 3 chr2 87331777 87332069 -163355785 - AluY SINE Alu -19 292 1 585 130 137 41 chr2 87332100 87332246 -163355608 - MER3 DNA MER1_type -21 188 29 2152 125 0 31 chr2 87332385 87332705 -163355149 - AluSx SINE Alu -2 310 1 2044 109 48 10 chr2 87332870 87333163 -163354691 - AluSg SINE Alu -6 304 1 428 204 31 10 chr2 87333522 87333620 -163354234 - L1ME1 LINE L1 -50 6116 6017 * 1803 217 37 4 chr2 87333616 87334076 -163353778 - L1MD1 LINE L1 -371 5871 5397 1329 232 94 17 chr2 87334083 87334613 -163353241 - L1MD1 LINE L1 -880 5266 4696 2242 115 0 3 chr2 87334631 87334936 -163352918 - AluSx SINE Alu -8 304 1 28 0 0 0 chr2 87335012 87335040 -163352814 + AT_rich Low_complexity Low_complexity 1 28 0 3878 162 42 50 chr2 87335442 87335505 -163352349 - L1MB4 LINE L1 0 6180 6118 2217 88 11 0 chr2 87335505 87335790 -163352064 - AluSx SINE Alu -24 288 1 3878 162 42 50 chr2 87335790 87336717 -163351137 - L1MB4 LINE L1 -62 6118 5200 35 24 0 0 chr2 87336826 87336868 -163350986 + AT_rich Low_complexity Low_complexity 1 42 0 1762 132 0 4 chr2 87336935 87337186 -163350668 - AluJb SINE Alu -3 309 60 2647 201 37 12 chr2 87337572 87337793 -163350061 + L1ME1 LINE L1 5478 5692 -474 2273 87 27 0 chr2 87337793 87338091 -163349763 + AluSc SINE Alu 1 306 -3 2647 201 37 12 chr2 87338091 87338519 -163349335 + L1ME1 LINE L1 5692 6143 -23 1823 169 0 36 chr2 87338552 87338859 -163348995 + AluJo SINE Alu 1 296 -16 915 195 138 14 chr2 87339212 87339422 -163348432 - MER8 DNA MER2_type -3 236 1 687 258 84 46 chr2 87341074 87341440 -163346414 - L1ME1 LINE L1 -280 5884 5483 2454 70 0 22 chr2 87341440 87341756 -163346098 + AluY SINE Alu 1 309 -2 687 258 84 46 chr2 87341756 87341977 -163345877 - L1ME1 LINE L1 -681 5483 5272 21 36 0 0 chr2 87343632 87343660 -163344194 + AT_rich Low_complexity Low_complexity 1 28 0 803 126 8 8 chr2 87344028 87344147 -163343707 + FLAM_C SINE Alu 1 119 -24 1498 196 7 7 chr2 87344170 87344456 -163343398 + AluJo SINE Alu 1 286 -26 21 0 0 0 chr2 87344987 87345008 -163342846 + AT_rich Low_complexity Low_complexity 1 21 0 252 250 79 0 chr2 87345374 87345450 -163342404 + MIR SINE MIR 159 240 -22 808 182 57 57 chr2 87345726 87345765 -163342089 - MER3 DNA MER1_type 0 209 171 2370 107 0 0 chr2 87345765 87346075 -163341779 - AluSg SINE Alu 0 310 1 808 182 57 57 chr2 87346075 87346244 -163341610 - MER3 DNA MER1_type -37 172 1 211 191 21 21 chr2 87346271 87346318 -163341536 + MIR SINE MIR 62 108 -100 2422 53 0 10 chr2 87346684 87346986 -163340868 - AluY SINE Alu -6 305 7 225 0 0 0 chr2 87347038 87347063 -163340791 + (CA)n Simple_repeat Simple_repeat 2 26 0 402 224 60 60 chr2 87347246 87347478 -163340376 - L1ME4a LINE L1 -22 6099 5868 919 180 0 41 chr2 87347909 87348108 -163339746 - AluJo SINE Alu 0 313 122 484 252 27 0 chr2 87348709 87348820 -163339034 + MIR3 SINE MIR 78 191 -17 208 163 0 20 chr2 87348953 87349002 -163338852 + T-rich Low_complexity Low_complexity 2 49 0 831 226 46 67 chr2 87349006 87349104 -163338750 - MIR SINE MIR -3 259 160 2111 113 3 0 chr2 87349104 87349439 -163338415 + AluSp SINE Alu 2 337 0 831 226 46 67 chr2 87349439 87349578 -163338276 - MIR SINE MIR -102 160 26 198 0 0 0 chr2 87349673 87349695 -163338159 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 200 233 17 0 chr2 87349780 87349840 -163338014 + (TA)n Simple_repeat Simple_repeat 1 61 0 1775 128 44 15 chr2 87349904 87350591 -163337263 - L1MCa LINE L1 -4133 2293 1456 1476 202 29 45 chr2 87350589 87350965 -163336889 - L1MCa LINE L1 -5939 487 118 * 977 174 77 10 chr2 87350966 87351161 -163336693 + AluJb SINE Alu 84 291 -21 464 138 50 0 chr2 87351170 87351250 -163336604 - L1MCa LINE L1 -6325 101 18 1929 157 0 3 chr2 87351407 87351712 -163336142 + AluJb SINE Alu 1 304 -8 879 289 68 18 chr2 87351721 87352115 -163335739 + L1MDa LINE L1 16 429 -6111 244 0 0 53 chr2 87352488 87352526 -163335328 + (GAA)n Simple_repeat Simple_repeat 1 36 0 4486 193 96 48 chr2 87352542 87354037 -163333817 + L1MDa LINE L1 1017 2639 -3901 842 160 0 0 chr2 87354037 87354168 -163333686 + FLAM_A SINE Alu 1 131 -2 4486 193 96 48 chr2 87354168 87354791 -163333063 + L1MDa LINE L1 2639 3231 -3309 501 223 77 8 chr2 87354912 87355042 -163332812 - MER91A DNA MER1_type -57 139 1 339 278 110 46 chr2 87355372 87355545 -163332309 + MIR3 SINE MIR 5 188 -20 877 134 8 0 chr2 87355794 87355921 -163331933 + FLAM_C SINE Alu 1 128 -5 504 0 0 0 chr2 87356666 87356722 -163331132 + (CA)n Simple_repeat Simple_repeat 1 56 0 802 194 17 17 chr2 87357127 87357302 -163330552 - MER45A DNA AcHobo 0 178 4 306 371 28 0 chr2 87357983 87358126 -163329728 + MIR SINE MIR 62 208 -54 228 146 0 24 chr2 87358394 87358435 -163329419 + MLT1J LTR MaLR 95 134 -377 655 140 34 16 chr2 87358651 87358903 -163328951 + CT-rich Low_complexity Low_complexity 1 256 0 1348 151 19 0 chr2 87358907 87359112 -163328742 - AluJb SINE Alu -1 311 103 1732 122 68 54 chr2 87359362 87359504 -163328350 + AluJo SINE Alu 7 146 -166 2395 95 0 0 chr2 87359504 87359808 -163328046 + AluSc SINE Alu 1 304 -5 1732 122 68 54 chr2 87359808 87359961 -163327893 + AluJo SINE Alu 146 306 -6 874 140 140 0 chr2 87359961 87360104 -163327750 + AluJb SINE Alu 134 296 -16 609 277 56 80 chr2 87360311 87360827 -163327027 + LTR33A LTR ERVL 1 504 -19 267 276 120 44 chr2 87361584 87361809 -163326045 + L1ME4a LINE L1 5757 5998 -123 216 0 0 0 chr2 87362953 87362977 -163324877 + (T)n Simple_repeat Simple_repeat 1 24 0 367 333 19 0 chr2 87363652 87363760 -163324094 - MER5A DNA MER1_type -77 112 3 21 36 0 0 chr2 87364381 87364409 -163323445 + AT_rich Low_complexity Low_complexity 1 28 0 582 255 54 5 chr2 87364504 87364703 -163323151 + MER63 DNA MER1_type 5 1688 0 420 333 25 19 chr2 87365174 87365336 -163322518 - L1ME LINE L1 -417 5773 5611 259 314 170 22 chr2 87365837 87366155 -163321699 - L1ME LINE L1 -4408 1988 1624 2818 13 0 3 chr2 87366200 87366512 -163321342 + AluYa5 SINE Alu 1 311 0 328 343 50 18 chr2 87366523 87366742 -163321112 - L1ME LINE L1 -4808 1588 1363 22 56 0 0 chr2 87367017 87367053 -163320801 + AT_rich Low_complexity Low_complexity 1 36 0 1757 192 76 15 chr2 87367091 87367407 -163320447 - LTR27 LTR ERV1 0 501 165 1960 147 0 3 chr2 87367407 87367707 -163320147 + AluSx SINE Alu 1 299 -13 1757 192 76 15 chr2 87367707 87367881 -163319973 - LTR27 LTR ERV1 -336 165 3 205 272 25 25 chr2 87367895 87367976 -163319878 + T-rich Low_complexity Low_complexity 5 85 0 856 183 5 55 chr2 87368034 87368236 -163319618 - Charlie1b DNA MER1_type -248 275 84 773 276 41 101 chr2 87368550 87369140 -163318714 + MLT1F LTR MaLR 1 542 0 22 0 0 0 chr2 87369623 87369645 -163318209 + AT_rich Low_complexity Low_complexity 1 22 0 1725 201 17 14 chr2 87369884 87370232 -163317622 - MLT1A1 LTR MaLR 0 365 17 2065 155 6 3 chr2 87370887 87371223 -163316631 - MER1B DNA MER1_type 0 337 1 366 280 106 29 chr2 87371905 87372079 -163315775 + MLT1F1 LTR MaLR 1 180 -362 317 188 12 0 chr2 87372092 87372177 -163315677 + CT-rich Low_complexity Low_complexity 2 87 0 2126 176 7 48 chr2 87372217 87372631 -163315223 - MER54A LTR ERVL -2 899 503 680 35 11 0 chr2 87372636 87372723 -163315131 + (TC)n Simple_repeat Simple_repeat 1 88 0 843 318 36 7 chr2 87372874 87373182 -163314672 + MLT1F1 LTR MaLR 247 563 -4 519 340 43 13 chr2 87373194 87373429 -163314425 + MIR SINE MIR 18 259 -3 294 250 36 0 chr2 87373608 87373692 -163314162 - L2 LINE L2 -876 2438 2352 322 286 13 0 chr2 87373803 87373880 -163313974 - MER5A DNA MER1_type -98 91 14 548 254 100 48 chr2 87373892 87374203 -163313651 + MER97c DNA MER1_type? 72 398 -692 24 32 0 0 chr2 87374249 87374280 -163313574 + AT_rich Low_complexity Low_complexity 1 31 0 927 299 80 10 chr2 87374297 87375198 -163312656 - L1ME LINE L1 -1830 4576 3588 717 269 15 25 chr2 87375207 87375404 -163312450 - MER58A DNA MER1_type -1 223 29 372 319 19 6 chr2 87375455 87375612 -163312242 - L1ME LINE L1 -2823 3583 3425 813 258 51 55 chr2 87375619 87376034 -163311820 - L1ME LINE L1 -3055 3351 2939 343 209 0 0 chr2 87376036 87376103 -163311751 + AluJ/monomer SINE Alu 235 301 -1 241 266 221 28 chr2 87376118 87376543 -163311311 - L1ME LINE L1 -3475 2931 2425 411 309 64 21 chr2 87376929 87377317 -163310537 - L1ME LINE L1 -4998 1411 1007 1518 233 17 3 chr2 87377339 87377699 -163310155 + MLT1A1 LTR MaLR 1 365 0 3261 239 48 10 chr2 87377715 87378846 -163309008 + L1MB7 LINE L1 2253 3426 -2720 725 228 44 26 chr2 87378817 87379089 -163308765 + L1MB7 LINE L1 4360 4636 -1510 * 513 111 0 0 chr2 87379112 87379184 -163308670 + tRNA-Pro-CCT tRNA tRNA 1 72 -3 2847 19 0 0 chr2 87379258 87379573 -163308281 + AluYb8 SINE Alu 1 315 -3 578 292 63 11 chr2 87379605 87379889 -163307965 + L1MB7 LINE L1 5884 6182 -2 21 36 0 0 chr2 87380538 87380566 -163307288 + AT_rich Low_complexity Low_complexity 1 28 0 33 66 0 0 chr2 87381278 87381339 -163306515 + AT_rich Low_complexity Low_complexity 1 61 0 546 320 88 47 chr2 87381363 87381897 -163305957 + L1ME4a LINE L1 5270 5825 -296 22 35 0 0 chr2 87385092 87385121 -163302733 + AT_rich Low_complexity Low_complexity 1 29 0 643 250 111 41 chr2 87385945 87386189 -163301665 - MIR SINE MIR -1 261 1 2429 84 0 3 chr2 87386248 87386556 -163301298 - AluY SINE Alu -4 307 1 1979 95 4 0 chr2 87386683 87386935 -163300919 - AluSp SINE Alu -17 296 44 1885 123 22 0 chr2 87387997 87388274 -163299580 + AluSx SINE Alu 1 283 -29 2005 143 0 3 chr2 87388660 87388968 -163298886 + AluSx SINE Alu 1 307 -5 2163 103 7 3 chr2 87389156 87389448 -163298406 + AluY SINE Alu 1 293 -18 21 36 0 0 chr2 87390601 87390629 -163297225 + AT_rich Low_complexity Low_complexity 1 28 0 363 346 0 10 chr2 87390988 87391092 -163296762 - L2 LINE L2 -32 3240 3138 23 54 0 0 chr2 87391094 87391131 -163296723 + AT_rich Low_complexity Low_complexity 1 37 0 443 230 101 6 chr2 87391348 87391526 -163296328 + L1MB7 LINE L1 4784 4978 -1168 * 3398 147 25 59 chr2 87391523 87392218 -163295636 + L1MB7 LINE L1 5489 6159 -25 2263 126 0 0 chr2 87392341 87392651 -163295203 + AluSx SINE Alu 1 310 -2 1161 196 55 5 chr2 87392730 87392950 -163294904 + LTR28-int LTR ERV1 198 428 -6663 273 330 28 18 chr2 87393144 87393253 -163294601 + LTR28-int LTR ERV1 1054 1163 -5928 11358 240 24 32 chr2 87393267 87396032 -163291822 + LTR28-int LTR ERV1 1492 4233 -2858 1906 100 30 36 chr2 87396189 87396490 -163291364 + LTR28-int LTR ERV1 6793 7091 0 1361 219 114 12 chr2 87396490 87396882 -163290972 + LTR28 LTR ERV1 1 439 -197 463 289 18 72 chr2 87396896 87397062 -163290792 - L2 LINE L2 -556 2758 2602 1125 126 40 0 chr2 87397845 87398020 -163289834 + AluSg/x SINE Alu 120 301 -9 23 33 0 0 chr2 87398381 87398411 -163289443 + AT_rich Low_complexity Low_complexity 1 30 0 343 216 90 9 chr2 87399811 87399922 -163287932 + L1MC/D LINE L1 5703 5822 -1986 35 71 0 0 chr2 87400008 87400078 -163287776 + AT_rich Low_complexity Low_complexity 1 70 0 697 204 32 0 chr2 87401780 87401937 -163285917 - MER104 DNA Tc2 -12 168 7 582 238 182 16 chr2 87401947 87402185 -163285669 - MIR SINE MIR 0 262 5 2004 112 0 18 chr2 87403386 87403671 -163284183 + AluSx SINE Alu 1 280 -32 1712 204 56 54 chr2 87403679 87404046 -163283808 + L1ME2 LINE L1 5649 6019 -145 2128 108 31 0 chr2 87404046 87404334 -163283520 + AluSg SINE Alu 1 297 -13 1712 204 56 54 chr2 87404334 87404481 -163283373 + L1ME2 LINE L1 6019 6164 0 2247 96 10 3 chr2 87404514 87404815 -163283039 + AluSq SINE Alu 1 303 -10 270 306 144 38 chr2 87405298 87405458 -163282396 + MIR SINE MIR 50 226 -36 7869 14 7 0 chr2 87405850 87407192 -163280662 - L1PA2 LINE L1 0 6155 4810 1472 128 34 30 chr2 87407453 87407718 -163280136 - MER1B DNA MER1_type -73 266 1 763 136 42 0 chr2 87407718 87407836 -163280018 + MER68 LTR ERV1 119 241 -321 1059 146 18 0 chr2 87407857 87408022 -163279832 - MER68 LTR ERV1 -171 391 224 920 206 0 29 chr2 87408029 87408204 -163279650 + MER68 LTR ERV1 393 562 0 572 213 65 0 chr2 87408427 87408535 -163279319 - MER5A DNA MER1_type -6 183 69 2023 277 122 57 chr2 87408576 87409159 -163278695 - L2 LINE L2 -6 3307 2763 2006 137 3 0 chr2 87409159 87409452 -163278402 - AluJb SINE Alu -18 294 1 2023 277 122 57 chr2 87409452 87409672 -163278182 - L2 LINE L2 -550 2763 2559 1465 160 25 4 chr2 87409672 87409916 -163277938 + AluJb SINE Alu 27 275 -37 2023 277 122 57 chr2 87409916 87410119 -163277735 - L2 LINE L2 -754 2559 2371 180 0 0 0 chr2 87410119 87410139 -163277715 + (TA)n Simple_repeat Simple_repeat 2 21 0 2023 277 122 57 chr2 87410139 87410507 -163277347 - L2 LINE L2 -942 2371 1848 3641 155 61 46 chr2 87411154 87411230 -163276624 + L1MB8 LINE L1 4903 4976 -1202 1809 176 0 10 chr2 87411230 87411537 -163276317 + AluJb SINE Alu 1 304 -8 3641 155 61 46 chr2 87411537 87411877 -163275977 + L1MB8 LINE L1 4976 5309 -869 1683 157 14 11 chr2 87411877 87412163 -163275691 + AluJo SINE Alu 6 292 -20 3641 155 61 46 chr2 87412163 87412871 -163274983 + L1MB8 LINE L1 5309 6062 -116 2130 130 0 0 chr2 87412960 87413268 -163274586 + AluSx SINE Alu 2 309 -3 259 319 0 0 chr2 87414406 87414475 -163273379 + L2 LINE L2 3204 3272 0 274 296 30 30 chr2 87414671 87414806 -163273048 + L1M4 LINE L1 4187 4321 -1825 763 287 132 39 chr2 87415022 87415614 -163272240 - Tigger8 DNA MER2_type -17 649 3 1998 123 19 38 chr2 87417163 87417480 -163270374 + AluSx SINE Alu 1 311 -1 2127 95 7 17 chr2 87418660 87418954 -163268900 + AluSc SINE Alu 1 291 -18 269 304 180 12 chr2 87419013 87419110 -163268744 - MIR SINE MIR -46 216 137 2004 121 35 7 chr2 87419110 87419400 -163268454 + AluSx SINE Alu 1 298 -14 269 304 180 12 chr2 87419400 87419463 -163268391 - MIR SINE MIR -125 137 29 292 209 229 39 chr2 87420796 87420949 -163266905 + MLT1K LTR MaLR 344 525 -63 2085 113 7 10 chr2 87422023 87422323 -163265531 + AluSx SINE Alu 1 299 -13 29 0 0 0 chr2 87422508 87422537 -163265317 + AT_rich Low_complexity Low_complexity 1 29 0 384 292 189 16 chr2 87428452 87428818 -163259036 + L2 LINE L2 2855 3283 -30 248 250 79 0 chr2 87429466 87429542 -163258312 + MIR SINE MIR 159 240 -22 903 182 57 57 chr2 87429818 87429856 -163257998 - MER3 DNA MER1_type 0 209 172 2153 103 0 3 chr2 87429856 87430174 -163257680 - AluSg SINE Alu 0 317 1 903 182 57 57 chr2 87430174 87430343 -163257511 - MER3 DNA MER1_type -36 173 1 211 191 21 21 chr2 87430370 87430417 -163257437 + MIR SINE MIR 62 108 -100 2480 55 0 10 chr2 87430783 87431090 -163256764 - AluY SINE Alu -1 310 7 243 0 0 0 chr2 87431142 87431169 -163256685 + (CA)n Simple_repeat Simple_repeat 2 28 0 485 233 60 60 chr2 87431352 87431584 -163256270 - L1ME4a LINE L1 -22 6099 5868 902 180 0 41 chr2 87432015 87432214 -163255640 - AluJo SINE Alu 0 313 122 489 243 27 0 chr2 87432815 87432926 -163254928 + MIR3 SINE MIR 78 191 -17 208 163 0 20 chr2 87433059 87433108 -163254746 + T-rich Low_complexity Low_complexity 2 49 0 827 222 46 67 chr2 87433112 87433210 -163254644 - MIR SINE MIR -3 259 160 2061 124 3 0 chr2 87433210 87433553 -163254301 + AluSp SINE Alu 2 345 0 827 222 46 67 chr2 87433553 87433692 -163254162 - MIR SINE MIR -102 160 26 198 0 0 0 chr2 87433787 87433809 -163254045 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 200 233 17 0 chr2 87433894 87433954 -163253900 + (TA)n Simple_repeat Simple_repeat 1 61 0 1965 214 38 21 chr2 87434015 87434704 -163253150 - L1MCa LINE L1 -4260 2347 1645 1588 211 29 43 chr2 87434703 87435078 -163252776 - L1MCa LINE L1 -5939 487 118 * 965 174 77 10 chr2 87435079 87435274 -163252580 + AluJb SINE Alu 84 291 -21 498 132 55 22 chr2 87435283 87435374 -163252480 - L1MCa LINE L1 -6325 101 8 1921 157 0 3 chr2 87435520 87435825 -163252029 + AluJb SINE Alu 1 304 -8 987 284 71 20 chr2 87435834 87436228 -163251626 + L1MD2 LINE L1 16 429 -6111 217 0 0 57 chr2 87436601 87436636 -163251218 + (GAA)n Simple_repeat Simple_repeat 1 33 0 5147 188 94 48 chr2 87436639 87438143 -163249711 + L1MD2 LINE L1 1010 2811 -3729 893 160 0 0 chr2 87438143 87438274 -163249580 + FLAM_A SINE Alu 1 131 -2 5147 188 94 48 chr2 87438274 87439077 -163248777 + L1MD2 LINE L1 2811 3576 -2964 2234 88 0 0 chr2 87439077 87439406 -163248448 + AluSg SINE Alu 1 329 0 5193 179 79 14 chr2 87439412 87440658 -163247196 + L1MD2 LINE L1 5405 6731 -22 2129 129 0 0 chr2 87440850 87441159 -163246695 - AluSx SINE Alu -3 309 1 1987 143 0 28 chr2 87442228 87442549 -163245305 - AluJb SINE Alu 0 312 1 426 266 18 0 chr2 87442597 87442710 -163245144 + MIR SINE MIR 82 196 -66 509 196 111 91 chr2 87442725 87442960 -163244894 - MIR SINE MIR -14 248 2 23 0 0 0 chr2 87443149 87443172 -163244682 + AT_rich Low_complexity Low_complexity 1 23 0 246 298 118 37 chr2 87444067 87444228 -163243626 - MER5B DNA MER1_type 0 178 5 2237 104 3 0 chr2 87446821 87447119 -163240735 - AluSg SINE Alu -11 299 1 266 171 71 34 chr2 87447342 87447413 -163240441 - L1MC/D LINE L1 -577 5587 5514 189 0 0 0 chr2 87447423 87447444 -163240410 + (T)n Simple_repeat Simple_repeat 1 21 0 276 190 190 0 chr2 87447463 87447563 -163240291 + L1M4 LINE L1 3087 3205 -2941 723 304 79 30 chr2 87447917 87448480 -163239374 + L2 LINE L2 2452 3049 -223 269 301 19 19 chr2 87448554 87448657 -163239197 - MLT1L LTR MaLR -8 607 505 1047 135 47 62 chr2 87449053 87449245 -163238609 + MER5A DNA MER1_type 1 189 0 374 265 42 74 chr2 87449365 87449554 -163238300 + L2 LINE L2 3122 3304 -9 24 32 0 0 chr2 87450167 87450198 -163237656 + AT_rich Low_complexity Low_complexity 1 31 0 243 289 56 0 chr2 87450433 87450523 -163237331 + L1ME LINE L1 2 96 -5974 198 103 0 0 chr2 87451538 87451567 -163236287 + (CAA)n Simple_repeat Simple_repeat 2 30 0 261 0 0 0 chr2 87452271 87452300 -163235554 + (CA)n Simple_repeat Simple_repeat 1 29 0 192 238 24 0 chr2 87452365 87452407 -163235447 - L2 LINE L2 -16 3256 3214 416 302 89 6 chr2 87452507 87452676 -163235178 - MIR SINE MIR 0 262 80 1143 137 0 0 chr2 87452945 87453106 -163234748 + AluSg/x SINE Alu 130 290 -22 199 300 0 0 chr2 87453453 87453513 -163234341 + L2 LINE L2 2924 2983 -289 644 220 104 104 chr2 87453646 87453795 -163234059 + MIR SINE MIR 22 170 -92 1998 122 0 53 chr2 87453795 87454114 -163233740 + AluSx SINE Alu 1 302 -10 644 220 104 104 chr2 87454114 87454125 -163233729 + MIR SINE MIR 170 180 -82 2065 131 0 13 chr2 87454125 87454431 -163233423 + AluJb SINE Alu 1 302 -10 644 220 104 104 chr2 87454431 87454510 -163233344 + MIR SINE MIR 179 262 0 1420 179 183 70 chr2 87454571 87455074 -163232780 - MLT1F1 LTR MaLR -26 541 1 232 135 0 0 chr2 87455364 87455401 -163232453 - LTR3b LTR ERVK -67 433 397 2391 170 41 12 chr2 87455405 87455822 -163232032 - LTR3 LTR ERVK 0 429 1 1959 159 10 0 chr2 87456954 87457263 -163230591 - AluJb SINE Alu 0 312 1 1960 125 7 4 chr2 87457270 87457549 -163230305 - AluSx SINE Alu -21 291 12 543 53 0 0 chr2 87457865 87457940 -163229914 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 2062 113 21 11 chr2 87457940 87458224 -163229630 - AluSq SINE Alu -26 287 1 1840 175 3 0 chr2 87459000 87459292 -163228562 + AluJb SINE Alu 2 294 -18 2194 111 0 3 chr2 87459470 87459768 -163228086 + AluSx SINE Alu 2 298 -14 2280 77 10 13 chr2 87459834 87460133 -163227721 - AluSx SINE Alu -14 298 1 692 182 38 0 chr2 87460411 87460543 -163227311 - MLT1F1 LTR MaLR 0 567 431 205 266 94 0 chr2 87461728 87461792 -163226062 + MIR SINE MIR 77 146 -116 958 109 0 0 chr2 87461915 87462043 -163225811 - AluSq SINE Alu -20 293 166 696 76 0 0 chr2 87462043 87462135 -163225719 - AluSq SINE Alu -220 93 2 1842 147 13 13 chr2 87462162 87462299 -163225555 + AluJb SINE Alu 1 137 -175 2474 98 0 0 chr2 87462299 87462606 -163225248 + AluSc SINE Alu 1 307 -2 1842 147 13 13 chr2 87462606 87462767 -163225087 + AluJb SINE Alu 136 299 -13 2025 232 11 31 chr2 87463263 87463802 -163224052 - L1ME1 LINE L1 -5 6161 5634 2870 139 81 39 chr2 87463802 87464391 -163223463 - LTR10A LTR ERV1 -7 626 1 4683 193 59 46 chr2 87464392 87464710 -163223144 - L1ME1 LINE L1 -543 5623 5311 2385 91 0 10 chr2 87464710 87465018 -163222836 - AluY SINE Alu -5 306 2 4683 193 59 46 chr2 87465018 87466293 -163221561 - L1ME1 LINE L1 -855 5311 4020 1020 146 6 12 chr2 87467381 87467552 -163220302 - AluJb SINE Alu -1 311 142 228 35 0 0 chr2 87467557 87467586 -163220268 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 180 0 0 0 chr2 87467712 87467732 -163220122 + (CAAAAA)n Simple_repeat Simple_repeat 1 20 0 677 140 0 0 chr2 87468020 87468134 -163219720 - FLAM_C SINE Alu -19 114 1 216 200 0 0 chr2 87468772 87468817 -163219037 + GA-rich Low_complexity Low_complexity 2 46 0 186 43 0 0 chr2 87468852 87468875 -163218979 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 558 289 52 63 chr2 87469093 87469536 -163218318 + L1ME LINE L1 5338 5775 -387 2319 127 0 0 chr2 87469630 87469938 -163217916 + AluSx SINE Alu 1 308 -4 728 146 6 95 chr2 87469959 87470117 -163217737 + FRAM SINE Alu 12 155 -21 2375 113 33 5 chr2 87470132 87470530 -163217324 - L1MB3 LINE L1 -8 6175 5767 2228 233 42 39 chr2 87470532 87470884 -163216970 - L1MA9 LINE L1 -30 6282 5926 2167 124 10 0 chr2 87470884 87471182 -163216672 + AluSx SINE Alu 1 301 -11 2228 233 42 39 chr2 87471182 87471490 -163216364 - L1MA9 LINE L1 -386 5926 5620 525 167 0 0 chr2 87471489 87471573 -163216281 - L1M3 LINE L1 -402 5781 5698 * 1498 228 91 84 chr2 87471577 87471822 -163216032 - Charlie2a DNA MER1_type -55 2807 2565 2009 151 0 16 chr2 87471822 87472133 -163215721 + AluSx SINE Alu 1 306 -6 1498 228 91 84 chr2 87472133 87472395 -163215459 - Charlie2a DNA MER1_type -297 2565 2306 2134 127 10 7 chr2 87472395 87472702 -163215152 + AluSq SINE Alu 1 308 -5 494 128 85 0 chr2 87472712 87472806 -163215048 + L1MD2 LINE L1 6255 6356 -3 1498 228 91 84 chr2 87472806 87473059 -163214795 - Charlie2a DNA MER1_type -564 2298 2030 1624 136 72 15 chr2 87473088 87473353 -163214501 + AluJb SINE Alu 3 282 -30 398 232 9 0 chr2 87473355 87473467 -163214387 + GA-rich Low_complexity Low_complexity 2 114 0 934 242 31 28 chr2 87473471 87473514 -163214340 - Charlie2a DNA MER1_type -857 2005 1964 2550 165 45 2 chr2 87473514 87473962 -163213892 - MLT1C LTR MaLR 0 467 1 934 242 31 28 chr2 87473962 87474207 -163213647 - Charlie2a DNA MER1_type -898 1964 1716 814 218 22 34 chr2 87475400 87475563 -163212291 + Charlie1a DNA MER1_type 107 269 -2492 2012 120 10 3 chr2 87475563 87475854 -163212000 + AluSg SINE Alu 18 310 0 814 218 22 34 chr2 87475854 87475869 -163211985 + Charlie1a DNA MER1_type 269 283 -1172 735 184 0 8 chr2 87475869 87475994 -163211860 + FLAM_C SINE Alu 2 125 -18 961 214 42 9 chr2 87476005 87476220 -163211634 + Charlie1a DNA MER1_type 271 492 -963 2162 106 7 0 chr2 87476227 87476520 -163211334 - AluSx SINE Alu -12 300 6 706 177 14 48 chr2 87476595 87476742 -163211112 - FLAM_A SINE Alu 0 142 1 2286 196 65 45 chr2 87476795 87477412 -163210442 + Charlie1a DNA MER1_type 827 1455 0 309 181 60 48 chr2 87477441 87477524 -163210330 - L2 LINE L2 0 3272 3189 1028 258 139 16 chr2 87477605 87477973 -163209881 - LTR16A LTR ERVL -13 437 25 1634 174 27 27 chr2 87478106 87478400 -163209454 - AluJb SINE Alu -10 302 9 309 273 64 9 chr2 87478407 87478517 -163209337 - MER5C DNA MER1_type -208 116 1 771 216 152 44 chr2 87481111 87481330 -163206524 - L1MC4a LINE L1 -1867 5941 5676 2412 85 0 19 chr2 87481330 87481646 -163206208 + AluY SINE Alu 1 310 -1 771 216 152 44 chr2 87481646 87481741 -163206113 - L1MC4a LINE L1 -2132 5676 5593 1719 162 61 0 chr2 87481762 87482040 -163205814 - AluSx SINE Alu -17 295 1 189 0 0 0 chr2 87484402 87484423 -163203431 + (T)n Simple_repeat Simple_repeat 1 21 0 30 77 0 0 chr2 87486351 87486416 -163201438 + GC_rich Low_complexity Low_complexity 1 65 0 21 0 0 0 chr2 87487404 87487425 -163200429 + AT_rich Low_complexity Low_complexity 1 21 0 2093 107 13 10 chr2 87487763 87488061 -163199793 - AluSx SINE Alu -13 299 1 569 155 0 0 chr2 87488523 87488620 -163199234 + MER5A DNA MER1_type 9 105 -84 2022 139 0 3 chr2 87490242 87490537 -163197317 + AluSx SINE Alu 1 294 -18 385 293 26 0 chr2 87491217 87491333 -163196521 + MIR SINE MIR 77 195 -67 715 256 73 26 chr2 87491903 87492092 -163195762 - MIR SINE MIR -11 251 47 1563 178 52 7 chr2 87492092 87492378 -163195476 - AluJo SINE Alu -12 300 2 715 256 73 26 chr2 87492378 87492422 -163195432 - MIR SINE MIR -215 47 7 447 231 19 10 chr2 87493733 87493837 -163194017 + L1ME3A LINE L1 6059 6163 -7 366 263 216 0 chr2 87493975 87494146 -163193708 + L1ME4a LINE L1 5619 5826 -295 291 293 129 14 chr2 87494217 87494357 -163193497 + L1ME4a LINE L1 5951 6106 -15 266 268 131 48 chr2 87494981 87495149 -163192705 + MIR3 SINE MIR 20 201 -7 446 226 239 13 chr2 87495640 87495799 -163192055 - MIR SINE MIR -43 219 25 2455 48 10 0 chr2 87496248 87496541 -163191313 + AluY SINE Alu 1 296 -15 753 171 16 78 chr2 87496700 87496893 -163190961 - Charlie2a DNA MER1_type -1215 1647 1467 2485 70 0 0 chr2 87497012 87497312 -163190542 - AluY SINE Alu -11 300 1 241 83 28 0 chr2 87497337 87497373 -163190481 - Charlie2a DNA MER1_type -2278 584 548 716 270 53 60 chr2 87497399 87497718 -163190136 - Charlie2a DNA MER1_type -2545 317 1 226 184 0 20 chr2 87497851 87497900 -163189954 + (TA)n Simple_repeat Simple_repeat 1 48 0 910 189 38 93 chr2 87497926 87497965 -163189889 + L1M4 LINE L1 2266 2306 -3840 2230 128 3 0 chr2 87497965 87498270 -163189584 + AluSx SINE Alu 1 306 -6 910 189 38 93 chr2 87498270 87498312 -163189542 + L1M4 LINE L1 2306 2349 -3797 2497 79 3 0 chr2 87498312 87498616 -163189238 + AluSp SINE Alu 1 305 -8 910 189 38 93 chr2 87498616 87498846 -163189008 + L1M4 LINE L1 2349 2561 -3585 3260 136 2 6 chr2 87499675 87500174 -163187680 - LOR1a LTR ERV1 0 497 1 437 280 87 30 chr2 87500350 87500679 -163187175 - L1MEd LINE L1 -1071 1419 974 292 313 47 88 chr2 87501541 87501928 -163185926 - L2 LINE L2 -5 3267 2897 299 320 178 3 chr2 87503491 87503794 -163184060 + L1MC4a LINE L1 5694 6049 -1759 25 0 0 0 chr2 87503956 87503981 -163183873 + AT_rich Low_complexity Low_complexity 1 25 0 1785 140 3 14 chr2 87504001 87504287 -163183567 + AluJb SINE Alu 11 293 -19 566 152 0 20 chr2 87504633 87504732 -163183122 + FLAM_A SINE Alu 20 116 -26 23 0 0 0 chr2 87504732 87504755 -163183099 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 87506040 87506067 -163181787 + GC_rich Low_complexity Low_complexity 1 27 0 1658 175 34 20 chr2 87507568 87507860 -163179994 - AluJb SINE Alu -16 296 1 1895 148 7 16 chr2 87508289 87508599 -163179255 - AluJb SINE Alu -5 307 1 389 12 12 71 chr2 87508609 87508693 -163179161 + (TA)n Simple_repeat Simple_repeat 2 80 0 2225 122 0 0 chr2 87508701 87508995 -163178859 - AluSx SINE Alu -18 294 1 268 149 0 0 chr2 87509213 87509260 -163178594 + L1ME4a LINE L1 6062 6108 -13 3523 169 111 11 chr2 87510116 87510353 -163177501 - Tigger6b DNA MER2_type -675 922 710 351 0 0 0 chr2 87510353 87510392 -163177462 + (CA)n Simple_repeat Simple_repeat 1 39 0 3523 169 111 11 chr2 87510392 87510990 -163176864 - Tigger6b DNA MER2_type -887 710 3 2297 98 3 0 chr2 87511014 87511309 -163176545 + AluSp SINE Alu 1 296 -17 1370 104 6 0 chr2 87511547 87511730 -163176124 - AluSg/x SINE Alu -19 293 110 21 0 0 0 chr2 87511780 87511801 -163176053 + AT_rich Low_complexity Low_complexity 1 21 0 523 250 81 12 chr2 87512839 87513087 -163174767 + L1MC4a LINE L1 5666 5930 -1878 248 260 0 55 chr2 87513891 87513964 -163173890 - L2 LINE L2 -18 3295 3227 2546 67 3 3 chr2 87514153 87514466 -163173388 - AluSp SINE Alu 0 313 1 285 250 0 0 chr2 87514872 87514940 -163172914 + MER103 DNA DNA 8 75 -91 1702 171 47 3 chr2 87514949 87515248 -163172606 - AluJo SINE Alu 0 312 1 475 274 118 0 chr2 87515355 87515490 -163172364 + MIR SINE MIR 112 262 0 1812 163 0 36 chr2 87515939 87516245 -163171609 + AluJo SINE Alu 4 298 -14 23 54 0 0 chr2 87516392 87516429 -163171425 + AT_rich Low_complexity Low_complexity 1 37 0 1611 163 55 28 chr2 87516497 87516786 -163171068 + AluJb SINE Alu 1 297 -15 750 215 105 5 chr2 87517062 87517253 -163170601 + MER58C DNA MER1_type 3 212 -3 493 288 122 28 chr2 87518014 87518419 -163169435 + MLT1J LTR MaLR 1 507 -4 479 289 178 13 chr2 87518598 87518823 -163169031 + MIR SINE MIR 1 262 0 761 255 87 54 chr2 87520083 87520452 -163167402 + L1MDb LINE L1 775 1155 -5254 2504 205 69 6 chr2 87520455 87521147 -163166707 + L1MDb LINE L1 1197 1932 -4474 285 305 0 21 chr2 87521148 87521243 -163166611 + LTR16B LTR ERVL 322 414 -50 2318 92 3 3 chr2 87521672 87521975 -163165879 + AluSx SINE Alu 5 307 -5 24 0 0 0 chr2 87523623 87523647 -163164207 + AT_rich Low_complexity Low_complexity 1 24 0 425 276 44 45 chr2 87524006 87524350 -163163504 + L1ME LINE L1 5307 5662 -508 592 187 50 7 chr2 87524615 87524754 -163163100 - MER105 DNA DNA -58 146 2 272 284 230 10 chr2 87524760 87524942 -163162912 + MIR SINE MIR 38 246 -16 578 258 198 5 chr2 87525451 87525668 -163162186 + MIR SINE MIR 3 261 -1 27 0 0 0 chr2 87526361 87526388 -163161466 + AT_rich Low_complexity Low_complexity 1 27 0 1214 162 98 49 chr2 87526389 87526655 -163161199 + AluJo SINE Alu 1 279 -33 2121 100 41 14 chr2 87527364 87527654 -163160200 - AluSx SINE Alu -14 298 1 949 127 0 0 chr2 87527762 87527904 -163159950 + AluSp/q SINE Alu 170 311 -2 3639 248 30 26 chr2 87530680 87530785 -163157069 - L1M4 LINE L1 -2197 3949 3846 1592 189 6 35 chr2 87530785 87531102 -163156752 - AluJb SINE Alu -4 308 1 3639 248 30 26 chr2 87531102 87531176 -163156678 - L1M4 LINE L1 -2300 3846 3774 2193 126 0 10 chr2 87531176 87531486 -163156368 - AluSg SINE Alu -3 307 1 3639 248 30 26 chr2 87531486 87532633 -163155221 - L1M4 LINE L1 -2372 3774 2617 337 268 12 0 chr2 87532657 87532739 -163155115 + Charlie7 DNA MER1_type 1 83 -2529 1725 175 3 48 chr2 87532740 87533049 -163154805 + AluJb SINE Alu 1 295 -17 44 70 0 0 chr2 87533055 87533141 -163154713 + AT_rich Low_complexity Low_complexity 1 86 0 340 221 97 9 chr2 87533195 87533308 -163154546 + Charlie7 DNA MER1_type 1428 1550 -1062 1871 164 91 40 chr2 87533326 87534020 -163153834 - Charlie6 DNA MER1_type -13 3487 2676 2370 159 47 2 chr2 87534020 87534428 -163153426 + MSTB LTR MaLR 1 426 0 1871 164 91 40 chr2 87534428 87534615 -163153239 - Charlie6 DNA MER1_type -824 2676 2500 1061 209 9 22 chr2 87534656 87534881 -163152973 + AluJo SINE Alu 82 303 -9 2170 100 3 3 chr2 87534917 87535206 -163152648 + AluSp SINE Alu 6 294 -19 589 221 31 0 chr2 87535206 87535333 -163152521 - Charlie6 DNA MER1_type -1116 2384 2254 * 1048 203 67 64 chr2 87535330 87535580 -163152274 - Charlie6 DNA MER1_type -1824 1676 1423 2372 75 10 0 chr2 87535580 87535885 -163151969 + AluSx SINE Alu 1 308 -4 1048 203 67 64 chr2 87535885 87535979 -163151875 - Charlie6 DNA MER1_type -2077 1423 1331 1152 105 7 0 chr2 87535986 87536139 -163151715 + AluSg/x SINE Alu 130 283 -27 1803 170 147 139 chr2 87536147 87536755 -163151099 - Charlie6 DNA MER1_type -2160 1340 719 1680 183 14 4 chr2 87536755 87537085 -163150769 + AluJo SINE Alu 1 333 0 1803 170 147 139 chr2 87537085 87537301 -163150553 - Charlie6 DNA MER1_type -2781 719 506 7680 199 64 81 chr2 87537311 87538612 -163149242 + L1MCa LINE L1 2053 3375 -3051 2200 92 16 16 chr2 87538612 87538749 -163149105 + AluSp SINE Alu 1 137 -176 2075 112 0 10 chr2 87538749 87539044 -163148810 + AluSg SINE Alu 1 292 -18 2200 92 16 16 chr2 87539044 87539212 -163148642 + AluSp SINE Alu 136 306 -7 7680 199 64 81 chr2 87539212 87539983 -163147871 + L1MCa LINE L1 3375 4158 -2268 273 81 0 0 chr2 87539983 87540020 -163147834 - U2 snRNA snRNA -151 37 1 7680 199 64 81 chr2 87540020 87540339 -163147515 + L1MCa LINE L1 4158 4481 -1945 2233 99 0 3 chr2 87540339 87540631 -163147223 + AluSx SINE Alu 1 291 -21 7680 199 64 81 chr2 87540631 87541529 -163146325 + L1MCa LINE L1 4481 5317 -1109 551 179 0 80 chr2 87541575 87541726 -163146128 + L1MC2 LINE L1 6205 6343 -1 21 0 0 0 chr2 87541736 87541757 -163146097 + AT_rich Low_complexity Low_complexity 1 21 0 515 216 18 76 chr2 87541787 87541882 -163145972 + Charlie7 DNA MER1_type 1922 2004 -608 1964 141 3 3 chr2 87541882 87542179 -163145675 + AluSx SINE Alu 1 297 -15 515 216 18 76 chr2 87542179 87542254 -163145600 + Charlie7 DNA MER1_type 2004 2082 -530 422 175 0 0 chr2 87542278 87542358 -163145496 - AluJ/FRAM SINE Alu -1 311 232 1921 215 86 66 chr2 87542358 87543088 -163144766 + LTR1B LTR ERV1 1 745 -81 1187 191 30 103 chr2 87543090 87543557 -163144297 + L1M4 LINE L1 2266 2698 -3448 2270 116 0 0 chr2 87543571 87543872 -163143982 + AluY SINE Alu 1 301 -10 198 0 0 0 chr2 87543874 87543896 -163143958 + (GGAA)n Simple_repeat Simple_repeat 3 24 0 358 266 135 36 chr2 87543932 87544124 -163143730 + L1MC4a LINE L1 5706 5916 -1892 231 277 136 23 chr2 87544523 87544700 -163143154 + L2 LINE L2 1511 1707 -1607 1155 147 27 45 chr2 87544721 87544945 -163142909 + AluJo SINE Alu 86 305 -7 425 338 113 34 chr2 87545128 87545811 -163142043 + L2 LINE L2 2135 2871 -443 1294 237 13 24 chr2 87545911 87546291 -163141563 + L1ME3 LINE L1 5717 6092 -70 2037 152 28 19 chr2 87546370 87546732 -163141122 - MLT1A1 LTR MaLR 0 365 1 2084 106 7 3 chr2 87546759 87547041 -163140813 + AluSq SINE Alu 1 283 -30 316 307 33 26 chr2 87547101 87547371 -163140483 + L1ME LINE L1 5528 5799 -322 21 0 0 0 chr2 87547417 87547438 -163140416 + AT_rich Low_complexity Low_complexity 1 21 0 820 259 44 31 chr2 87547478 87547884 -163139970 - MLT1H LTR MaLR 0 549 86 2412 96 0 0 chr2 87548706 87549018 -163138836 - AluSq SINE Alu -1 312 1 264 260 99 68 chr2 87549127 87549319 -163138535 + L2 LINE L2 2292 2489 -825 709 189 170 0 chr2 87549706 87549865 -163137989 + MER5A DNA MER1_type 4 189 0 302 232 38 0 chr2 87550022 87550115 -163137739 + LTR16C LTR ERVL 353 489 -2 1025 193 11 0 chr2 87550312 87550488 -163137366 + MER45A DNA AcHobo 1 178 0 202 364 30 20 chr2 87550769 87550868 -163136986 + L2 LINE L2 2716 2815 -499 989 195 0 6 chr2 87551275 87551449 -163136405 + FRAM SINE Alu 1 173 -3 333 294 10 0 chr2 87552238 87552340 -163135514 - MLT1K LTR MaLR -339 249 147 2056 135 7 3 chr2 87552340 87552643 -163135211 - AluSx SINE Alu -8 304 1 1134 53 0 0 chr2 87552843 87553003 -163134851 + AluSp/q SINE Alu 159 318 0 214 176 191 0 chr2 87553003 87553071 -163134783 - L3 LINE CR1 -285 1292 1212 36818 80 7 9 chr2 87553875 87560030 -163127824 - L1PA6 LINE L1 -3 6151 11 1855 126 0 0 chr2 87560064 87560311 -163127543 + AluSx SINE Alu 19 265 -47 655 228 0 0 chr2 87560329 87560443 -163127411 + FLAM_A SINE Alu 1 114 -19 393 22 0 0 chr2 87560451 87560497 -163127357 + (TAGA)n Simple_repeat Simple_repeat 2 47 0 458 263 95 55 chr2 87560806 87561167 -163126687 + L1MC4a LINE L1 5528 5794 -327 310 289 39 29 chr2 87561873 87561977 -163125877 - MIR SINE MIR -15 247 143 228 257 14 0 chr2 87562034 87562104 -163125750 + MIR SINE MIR 132 202 -60 1021 244 138 19 chr2 87562106 87562425 -163125429 + LTR18A LTR ERVL 1 357 0 44125 31 21 1 chr2 87562453 87568483 -163119371 + L1HS LINE L1 2 6154 -1 246 361 10 21 chr2 87568862 87568959 -163118895 - MIR SINE MIR -151 111 16 591 172 0 0 chr2 87569220 87569319 -163118535 - MER45 DNA AcHobo -5 1576 1478 4964 218 83 42 chr2 87569324 87569799 -163118055 - L1ME LINE L1 -455 5780 5326 1988 139 11 0 chr2 87569799 87570107 -163117747 - AluSx SINE Alu 0 311 1 4964 218 83 42 chr2 87570107 87570722 -163117132 - L1ME LINE L1 -909 5326 4738 2360 75 10 3 chr2 87570722 87571015 -163116839 + AluSq SINE Alu 1 295 -18 4964 218 83 42 chr2 87571015 87571778 -163116076 - L1ME LINE L1 -1497 4738 3848 1259 160 72 44 chr2 87571778 87572028 -163115826 - AluJo SINE Alu -17 295 39 1013 224 136 78 chr2 87572028 87572296 -163115558 - L1ME LINE L1 -2360 3855 3547 1791 144 0 32 chr2 87572296 87572581 -163115273 - AluJo SINE Alu -25 287 12 1013 224 136 78 chr2 87572581 87572776 -163115078 - L1ME LINE L1 -2668 3547 3365 1047 198 55 39 chr2 87572782 87573090 -163114764 - L1ME LINE L1 -4457 1939 1627 1039 164 99 5 chr2 87573092 87573305 -163114549 - L1MB7 LINE L1 0 6184 5952 4635 252 47 19 chr2 87573308 87574707 -163113147 - L1ME LINE L1 -4759 1637 199 309 331 34 29 chr2 87575087 87575262 -163112592 + MARNA DNA Mariner 183 358 -228 2286 91 0 0 chr2 87575885 87576170 -163111684 + AluSq SINE Alu 1 285 -28 25 0 0 0 chr2 87576830 87576855 -163110999 + AT_rich Low_complexity Low_complexity 1 25 0 288 225 14 14 chr2 87576878 87576949 -163110905 + MIR SINE MIR 36 106 -102 673 225 73 83 chr2 87577130 87577432 -163110422 - L2 LINE L2 -29 3284 2986 1604 228 84 35 chr2 87577432 87577968 -163109886 - MLT1F1 LTR MaLR 0 567 6 376 288 154 46 chr2 87577991 87578231 -163109623 - L2 LINE L2 -338 2976 2711 217 365 134 57 chr2 87578384 87578735 -163109119 + L2 LINE L2 2817 3194 -78 1015 214 71 15 chr2 87578946 87579213 -163108641 + L1MC4a LINE L1 5892 6173 -1635 * 4508 192 58 72 chr2 87579199 87579468 -163108386 + L1MC4a LINE L1 5754 6025 -1783 2950 84 32 63 chr2 87579468 87579514 -163108340 - MSTA LTR MaLR 0 428 382 2145 99 58 0 chr2 87579514 87579806 -163108048 + AluSc SINE Alu 1 309 0 2950 84 32 63 chr2 87579806 87580201 -163107653 - MSTA LTR MaLR -46 382 1 4508 192 58 72 chr2 87580201 87581376 -163106478 + L1MC4a LINE L1 6025 7214 -594 846 151 8 0 chr2 87581376 87581502 -163106352 + FLAM_A SINE Alu 4 130 -3 4508 192 58 72 chr2 87581502 87581520 -163106334 + L1MC4a LINE L1 7214 7231 -577 1809 169 0 10 chr2 87581520 87581822 -163106032 + AluSx SINE Alu 11 309 -3 4508 192 58 72 chr2 87581822 87581941 -163105913 + L1MC4a LINE L1 7231 7297 -511 * 9505 222 62 24 chr2 87581935 87582781 -163105073 + L1ME1 LINE L1 2265 3077 -3069 1948 133 44 0 chr2 87582781 87583074 -163104780 + AluSq SINE Alu 1 306 -7 9505 222 62 24 chr2 87583074 87584950 -163102904 + L1ME1 LINE L1 3077 5093 -1053 2983 208 30 42 chr2 87584956 87585702 -163102152 + L1ME1 LINE L1 5374 6274 -60 2377 93 0 3 chr2 87585702 87586004 -163101850 + AluSq SINE Alu 1 301 -12 2983 208 30 42 chr2 87586004 87586054 -163101800 + L1ME1 LINE L1 6274 6323 -11 237 132 0 0 chr2 87586125 87586163 -163101691 - L1MA10 LINE L1 -14 6320 6283 710 223 48 6 chr2 87586184 87586350 -163101504 - MLT1I LTR MaLR -236 173 1 648 97 0 0 chr2 87586371 87586464 -163101390 + (TCCCC)n Simple_repeat Simple_repeat 4 96 0 1781 170 28 0 chr2 87586469 87586751 -163101103 - AluJb SINE Alu -22 290 1 847 156 0 28 chr2 87587167 87587308 -163100546 - FLAM_A SINE Alu 0 142 6 25 31 0 0 chr2 87587313 87587345 -163100509 + AT_rich Low_complexity Low_complexity 1 32 0 1661 159 0 63 chr2 87587694 87588025 -163099829 + AluJo SINE Alu 1 312 0 247 244 91 45 chr2 87588036 87588212 -163099642 + L1P4 LINE L1 5328 5511 -663 307 227 41 0 chr2 87588267 87588364 -163099490 + L1ME4a LINE L1 6015 6115 -6 21 0 0 0 chr2 87588371 87588392 -163099462 + AT_rich Low_complexity Low_complexity 1 21 0 1951 138 17 0 chr2 87588445 87588736 -163099118 - AluSx SINE Alu -16 296 1 315 104 0 0 chr2 87589173 87589221 -163098633 + (TG)n Simple_repeat Simple_repeat 2 49 0 2289 103 3 0 chr2 87589245 87589547 -163098307 + AluSg SINE Alu 1 303 -7 392 274 29 0 chr2 87589548 87589650 -163098204 - MIR SINE MIR -31 231 127 1970 209 167 109 chr2 87589846 87590746 -163097108 + MER45C DNA AcHobo 2 953 0 2301 111 0 9 chr2 87590961 87591276 -163096578 - AluSx SINE Alu 0 312 1 2459 74 0 3 chr2 87592359 87592658 -163095196 - AluY SINE Alu -13 298 1 192 152 0 0 chr2 87593050 87593083 -163094771 + (TATG)n Simple_repeat Simple_repeat 4 36 0 333 319 109 0 chr2 87593255 87593374 -163094480 - MLT1J1 LTR MaLR -271 175 44 3466 238 113 116 chr2 87593418 87594217 -163093637 + HAL1 LINE L1 248 1048 -1459 1648 183 0 14 chr2 87594217 87594506 -163093348 + AluJo SINE Alu 11 295 -17 3466 238 113 116 chr2 87594506 87595893 -163091961 + HAL1 LINE L1 1048 2430 -77 1704 134 7 41 chr2 87595893 87596207 -163091647 - AluJo SINE Alu 0 304 1 3466 238 113 116 chr2 87596207 87596226 -163091628 + HAL1 LINE L1 2430 2448 -59 326 253 53 11 chr2 87596575 87596670 -163091184 - MIR SINE MIR -46 216 118 2211 100 17 3 chr2 87596670 87596970 -163090884 + AluSc SINE Alu 1 304 -5 733 291 112 26 chr2 87597380 87597878 -163089976 - L1ME4a LINE L1 0 6121 5581 2528 63 0 13 chr2 87598892 87599207 -163088647 - AluY SINE Alu 0 311 1 628 157 0 20 chr2 87599685 87599787 -163088067 - MER2 DNA MER2_type -240 105 6 1685 213 41 37 chr2 87599792 87600300 -163087554 - L1ME4a LINE L1 -1302 4844 4335 432 164 68 0 chr2 87600300 87600373 -163087481 - Tigger5 DNA MER2_type -1 2322 2245 256 162 0 0 chr2 87600449 87600486 -163087368 - Tigger5 DNA MER2_type -2286 37 1 1046 214 36 62 chr2 87600486 87600761 -163087093 - L1ME4a LINE L1 -1809 4337 4070 761 286 69 45 chr2 87600789 87601167 -163086687 + MLT1J1 LTR MaLR 55 441 -5 683 294 15 52 chr2 87601340 87601609 -163086245 + L1MEc LINE L1 34 292 -6104 * 1872 248 97 41 chr2 87601602 87602217 -163085637 - L1ME3 LINE L1 -299 5863 5284 2261 131 0 0 chr2 87602217 87602523 -163085331 - AluSx SINE Alu -4 308 3 1872 248 97 41 chr2 87602523 87602732 -163085122 - L1ME3 LINE L1 -878 5284 5088 2130 106 14 3 chr2 87602732 87603025 -163084829 - AluSx SINE Alu -14 298 3 1872 248 97 41 chr2 87603025 87603093 -163084761 - L1ME3 LINE L1 -1074 5088 5025 2476 82 0 0 chr2 87603093 87603397 -163084457 - AluSg SINE Alu -6 304 1 1872 248 97 41 chr2 87603397 87603966 -163083888 - L1ME3 LINE L1 -1137 5025 4324 396 0 0 0 chr2 87603966 87604010 -163083844 + (TA)n Simple_repeat Simple_repeat 1 44 0 1872 248 97 41 chr2 87604010 87604022 -163083832 - L1ME3 LINE L1 -1838 4324 4314 1068 210 39 39 chr2 87604021 87604355 -163083499 - L1M4 LINE L1 -1545 4601 4268 * 25 0 0 0 chr2 87604474 87604499 -163083355 + AT_rich Low_complexity Low_complexity 1 25 0 1460 223 69 48 chr2 87604499 87604935 -163082919 - MLT1D LTR MaLR -60 445 1 2472 140 125 32 chr2 87605409 87605873 -163081981 + LTR22 LTR ERVK 1 507 -2 309 263 126 120 chr2 87606080 87606430 -163081424 + L2 LINE L2 2330 2681 -633 240 324 14 14 chr2 87607446 87607517 -163080337 - L2 LINE L2 0 3272 3202 2810 194 15 29 chr2 87607955 87608477 -163079377 + MLT2B2 LTR ERVL 1 515 0 484 72 0 29 chr2 87608891 87608960 -163078894 - MSTA LTR MaLR 0 428 362 2213 93 13 3 chr2 87608960 87609262 -163078592 + AluSc SINE Alu 1 305 -4 191 59 0 29 chr2 87609647 87609681 -163078173 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 696 293 115 27 chr2 87609682 87610170 -163077684 - L1ME4a LINE L1 -10 6111 5581 2510 64 0 13 chr2 87611175 87611488 -163076366 - AluY SINE Alu -2 309 1 361 301 166 69 chr2 87612210 87612767 -163075087 + L1M2 LINE L1 733 1404 -5445 289 241 213 46 chr2 87615263 87615371 -163072483 + L2 LINE L2 3186 3311 -2 24 77 0 0 chr2 87616331 87616383 -163071471 + AT_rich Low_complexity Low_complexity 1 52 0 461 250 10 29 chr2 87616530 87616634 -163071220 - MIR SINE MIR -84 124 23 601 284 31 22 chr2 87617552 87617774 -163070080 - L2 LINE L2 -8 3305 3082 1895 104 104 0 chr2 87618372 87618679 -163069175 - MER44D DNA MER2_type 0 609 1 307 286 14 0 chr2 87620090 87620160 -163067694 - L2 LINE L2 -13 3259 3189 265 82 41 0 chr2 87620456 87620505 -163067349 + (TA)n Simple_repeat Simple_repeat 1 51 0 22 0 0 0 chr2 87621301 87621323 -163066531 + AT_rich Low_complexity Low_complexity 1 22 0 2239 122 0 3 chr2 87621380 87621684 -163066170 - AluSx SINE Alu -9 303 1 815 184 13 13 chr2 87621914 87622066 -163065788 + FRAM SINE Alu 4 155 -21 1849 157 0 0 chr2 87622752 87623026 -163064828 - AluSx SINE Alu -38 274 1 188 167 21 0 chr2 87624031 87624079 -163063775 + CT-rich Low_complexity Low_complexity 2 50 0 1345 157 0 26 chr2 87624799 87625029 -163062825 - AluJo SINE Alu -5 307 84 2122 140 73 58 chr2 87626280 87626326 -163061528 - MSTB2 LTR MaLR 0 457 413 2326 78 3 3 chr2 87626326 87626619 -163061235 + AluSq SINE Alu 9 301 -12 2122 140 73 58 chr2 87626619 87627022 -163060832 - MSTB2 LTR MaLR -44 413 1 2309 118 0 0 chr2 87627493 87627799 -163060055 - AluSx SINE Alu -6 306 1 1237 148 0 66 chr2 87629006 87629249 -163058605 + AluJo SINE Alu 86 312 0 2379 97 3 0 chr2 87629312 87629620 -163058234 - AluSg SINE Alu -1 309 1 1327 239 122 98 chr2 87632910 87633036 -163054818 - L1MC4 LINE L1 -6 8036 7914 2019 85 78 0 chr2 87633036 87633319 -163054535 - AluY SINE Alu -6 305 1 1327 239 122 98 chr2 87633319 87633632 -163054222 - L1MC4 LINE L1 -128 7914 7610 2300 87 10 0 chr2 87633632 87633942 -163053912 - AluSp SINE Alu 0 313 1 1327 239 122 98 chr2 87633942 87633996 -163053858 - L1MC4 LINE L1 -432 7610 7559 2214 117 0 13 chr2 87633996 87634312 -163053542 - AluSx SINE Alu 0 312 1 476 46 58 11 chr2 87634314 87634401 -163053453 + T-rich Low_complexity Low_complexity 4 94 0 1483 123 119 12 chr2 87634401 87634545 -163053309 - AluJo SINE Alu -30 282 155 229 25 0 50 chr2 87634545 87634585 -163053269 + (TTTTG)n Simple_repeat Simple_repeat 4 41 0 1483 123 119 12 chr2 87634585 87634684 -163053170 - AluJo SINE Alu -157 155 13 1327 239 122 98 chr2 87634684 87635061 -163052793 - L1MC4 LINE L1 -483 7559 7192 1494 135 142 11 chr2 87635061 87635321 -163052533 - AluJb SINE Alu -18 294 1 1327 239 122 98 chr2 87635321 87635635 -163052219 - L1MC4 LINE L1 -850 7192 6817 21 36 0 0 chr2 87635894 87635922 -163051932 + AT_rich Low_complexity Low_complexity 1 28 0 208 293 37 12 chr2 87635999 87636081 -163051773 + L2 LINE L2 2226 2309 -1005 264 185 0 0 chr2 87636188 87636242 -163051612 + (TA)n Simple_repeat Simple_repeat 1 54 0 191 220 119 0 chr2 87636755 87636814 -163051040 + L2 LINE L2 3157 3222 -50 2170 111 0 0 chr2 87637365 87637695 -163050159 - AluSx SINE Alu 0 335 6 2276 101 0 0 chr2 87638453 87638749 -163049105 - AluSx SINE Alu -16 296 1 13148 110 61 14 chr2 87638749 87640859 -163046995 - Tigger1 DNA MER2_type -149 2269 53 2168 98 3 30 chr2 87640859 87641164 -163046690 + AluSx SINE Alu 1 297 -15 13148 110 61 14 chr2 87641164 87641220 -163046634 - Tigger1 DNA MER2_type -2365 53 1 1029 163 12 12 chr2 87641952 87642124 -163045730 + AluJb SINE Alu 42 213 -99 199 328 0 0 chr2 87642755 87642813 -163045041 - L3 LINE CR1 -2 1575 1518 1637 237 47 78 chr2 87643900 87644661 -163043193 - L1ME3A LINE L1 -9 6555 5835 5585 110 26 28 chr2 87644661 87646129 -163041725 + L1ME3A LINE L1 4722 6208 -347 2317 107 0 3 chr2 87646129 87646437 -163041417 + AluSx SINE Alu 6 312 0 5585 110 26 28 chr2 87646437 87646784 -163041070 + L1PA14 LINE L1 6208 6554 -1 1637 237 47 78 chr2 87646784 87647022 -163040832 - L1ME3A LINE L1 -729 5835 5591 468 159 87 24 chr2 87647046 87647172 -163040682 - L1MC5 LINE L1 -30 7931 7798 466 311 128 16 chr2 87647308 87647684 -163040170 + L2 LINE L2 1914 2331 -983 5732 141 44 34 chr2 87647750 87648219 -163039635 - L1MC1 LINE L1 0 6333 5870 2168 137 0 10 chr2 87648219 87648532 -163039322 - AluSx SINE Alu -2 310 1 5732 141 44 34 chr2 87648532 87649070 -163038784 - L1MC1 LINE L1 -463 5870 5296 604 256 0 0 chr2 87649070 87649199 -163038655 - FLAM_A SINE Alu -3 130 2 5732 141 44 34 chr2 87649199 87649658 -163038196 - L1MC1 LINE L1 -1037 5296 4843 369 233 0 0 chr2 87649658 87649731 -163038123 - MER2 DNA MER2_type 0 345 273 233 268 58 14 chr2 87650716 87650854 -163037000 - L1MC1 LINE L1 -1595 4551 4408 396 0 0 0 chr2 87650929 87650973 -163036881 + (TA)n Simple_repeat Simple_repeat 1 44 0 4951 194 63 115 chr2 87650984 87651741 -163036113 - L1MDa LINE L1 -1545 4995 4200 572 165 0 0 chr2 87651741 87651826 -163036028 + AluJ/FLAM SINE Alu 3 87 -225 4951 194 63 115 chr2 87651826 87653432 -163034422 - L1MDa LINE L1 -2340 4200 2512 2372 79 3 0 chr2 87653432 87653724 -163034130 + AluSx SINE Alu 20 312 0 255 61 0 0 chr2 87653724 87653757 -163034097 + (TA)n Simple_repeat Simple_repeat 2 34 0 4951 194 63 115 chr2 87653757 87654075 -163033779 - L1MDa LINE L1 -4026 2514 2385 3890 161 20 32 chr2 87654075 87655330 -163032524 - L1MB7 LINE L1 -8 6570 1921 183 129 0 0 chr2 87655381 87655412 -163032442 + (CATA)n Simple_repeat Simple_repeat 2 32 0 3015 162 14 10 chr2 87655412 87655925 -163031929 - MLT2B3 LTR ERVL -39 515 1 945 178 11 5 chr2 87655928 87656113 -163031741 - L1MDa LINE L1 -4621 1919 1734 1368 166 57 97 chr2 87656128 87656214 -163031640 - L1MDa LINE L1 -4980 1560 1472 212 0 36 0 chr2 87656214 87656242 -163031612 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1368 166 57 97 chr2 87656242 87656291 -163031563 - L1MDa LINE L1 -5068 1472 1423 2011 141 3 52 chr2 87656291 87656617 -163031237 - AluSx SINE Alu -2 310 1 1368 166 57 97 chr2 87656617 87656869 -163030985 - L1MDa LINE L1 -5117 1423 1163 3891 116 19 54 chr2 87656869 87656933 -163030921 + L1MA8 LINE L1 5556 5621 -670 1832 117 65 45 chr2 87656933 87657223 -163030631 + AluSx SINE Alu 1 296 -16 3891 116 19 54 chr2 87657223 87657450 -163030404 + L1MA8 LINE L1 5621 5855 -436 707 165 24 8 chr2 87657450 87657577 -163030277 + FLAM_C SINE Alu 2 130 -3 3891 116 19 54 chr2 87657577 87658042 -163029812 + L1MA8 LINE L1 5855 6286 -5 1368 166 57 97 chr2 87658042 87658105 -163029749 - L1MDa LINE L1 -5377 1163 1126 1487 202 63 31 chr2 87658109 87658425 -163029429 - MLT1C LTR MaLR -23 444 109 2074 123 25 0 chr2 87658425 87658709 -163029145 - AluSx SINE Alu -21 291 1 1487 202 63 31 chr2 87658709 87658817 -163029037 - MLT1C LTR MaLR -358 109 6 1058 272 72 2 chr2 87658822 87659254 -163028600 - L1MDa LINE L1 -5407 1133 436 395 275 109 74 chr2 87659251 87659319 -163028535 - L1MEd LINE L1 -3225 2904 2840 * 2580 58 0 3 chr2 87659319 87659630 -163028224 - AluY SINE Alu -1 310 1 395 275 109 74 chr2 87659630 87659949 -163027905 - L1MEd LINE L1 -3289 2840 2534 1084 196 165 38 chr2 87659949 87660295 -163027559 + MLT1B LTR MaLR 1 390 0 395 275 109 74 chr2 87660295 87660648 -163027206 - L1MEd LINE L1 -3595 2534 2137 2472 120 16 0 chr2 87661275 87661643 -163026211 - L1MA2 LINE L1 0 6304 5931 339 315 39 51 chr2 87661655 87661775 -163026079 - HAL1 LINE L1 -938 1569 1450 2382 83 6 13 chr2 87661775 87662088 -163025766 - AluY SINE Alu 0 311 1 339 315 39 51 chr2 87662088 87662145 -163025709 - HAL1 LINE L1 -1057 1450 1394 1849 125 52 14 chr2 87662211 87662498 -163025356 + MER7A DNA MER2_type 50 345 -1 1387 264 68 107 chr2 87662499 87663371 -163024483 - L1MEd LINE L1 -4885 1234 407 216 0 0 0 chr2 87663371 87663395 -163024459 + (TA)n Simple_repeat Simple_repeat 2 25 0 1387 264 68 107 chr2 87663395 87663551 -163024303 - L1MEd LINE L1 -5712 407 246 2493 66 0 28 chr2 87663555 87663872 -163023982 - AluY SINE Alu -1 310 3 617 237 86 14 chr2 87663872 87664083 -163023771 + L1ME3 LINE L1 5942 6166 -4 321 222 103 16 chr2 87664124 87664250 -163023604 - L1MEd LINE L1 -5980 139 3 2268 110 10 0 chr2 87664599 87664907 -163022947 - AluSx SINE Alu -1 311 1 1806 199 74 31 chr2 87664955 87665403 -163022451 + MLT1C LTR MaLR 1 467 0 289 240 160 20 chr2 87666466 87666566 -163021288 + L2 LINE L2 2930 3043 -229 218 189 0 0 chr2 87666877 87666914 -163020940 + GA-rich Low_complexity Low_complexity 1 37 0 501 318 49 4 chr2 87666920 87667165 -163020689 + L1ME4a LINE L1 5316 5571 -2237 395 244 44 87 chr2 87667207 87667436 -163020418 + L1ME4a LINE L1 5704 5922 -199 1641 170 30 3 chr2 87667450 87667750 -163020104 + AluJb SINE Alu 3 310 -2 2544 189 80 33 chr2 87667895 87668494 -163019360 - L1ME1 LINE L1 -5 6161 5535 368 281 115 0 chr2 87670056 87670195 -163017659 + MIR SINE MIR 31 185 -77 445 223 254 8 chr2 87670271 87670401 -163017453 + MER5A DNA MER1_type 28 189 0 517 212 235 0 chr2 87671156 87671288 -163016566 - MER5A DNA MER1_type 0 189 27 534 241 18 0 chr2 87671387 87671499 -163016355 - MIR SINE MIR -88 174 61 2611 114 52 33 chr2 87671649 87671998 -163015856 + MSTA LTR MaLR 1 342 -86 3544 60 27 5 chr2 87671998 87672444 -163015410 - L1PA7 LINE L1 0 6154 5699 2203 87 14 0 chr2 87672444 87672733 -163015121 - AluY SINE Alu -18 293 1 2611 114 52 33 chr2 87672733 87672802 -163015052 + MSTA LTR MaLR 341 428 0 2803 194 17 29 chr2 87673216 87673737 -163014117 - MLT2B2 LTR ERVL 0 515 1 240 324 14 14 chr2 87674175 87674246 -163013608 + L2 LINE L2 3202 3272 0 326 258 132 123 chr2 87675262 87675611 -163012243 - L2 LINE L2 -633 2681 2330 2472 140 125 32 chr2 87675818 87676282 -163011572 - LTR22 LTR ERVK -2 507 1 1436 218 70 49 chr2 87676756 87677182 -163010672 + MLT1D LTR MaLR 1 435 -70 821 124 0 0 chr2 87677187 87677308 -163010546 - AluSc SINE Alu 0 309 189 235 171 24 0 chr2 87677314 87677355 -163010499 + MLT1D LTR MaLR 426 467 0 670 285 89 57 chr2 87677427 87677570 -163010284 - L1ME3A LINE L1 -274 5896 5759 2329 84 3 3 chr2 87677570 87677868 -163009986 + AluSx SINE Alu 1 298 -14 324 70 0 0 chr2 87677871 87677914 -163009940 + (CA)n Simple_repeat Simple_repeat 2 44 0 670 285 89 57 chr2 87677914 87678260 -163009594 - L1ME3A LINE L1 -412 5758 5387 26 50 0 0 chr2 87678369 87678409 -163009445 + AT_rich Low_complexity Low_complexity 1 40 0 1845 197 46 14 chr2 87678433 87678783 -163009071 - MLT1A1 LTR MaLR -4 361 1 290 235 55 142 chr2 87678937 87679088 -163008766 - L1MC5 LINE L1 -301 7660 7497 2191 97 0 0 chr2 87679088 87679387 -163008467 + AluSc SINE Alu 1 299 0 290 235 55 142 chr2 87679387 87679501 -163008353 - L1MC5 LINE L1 -464 7497 7375 2546 67 15 90 chr2 87679501 87679890 -163007964 - L1PA11 LINE L1 0 6174 5815 290 235 55 142 chr2 87679890 87680856 -163006998 - L1MC5 LINE L1 -586 7375 6698 2003 98 76 0 chr2 87681161 87681438 -163006416 + AluSx SINE Alu 1 298 -14 1967 159 36 9 chr2 87681711 87682045 -163005809 + MER2 DNA MER2_type 2 344 0 305 262 67 20 chr2 87682104 87682253 -163005601 - L1ME3A LINE L1 -905 5241 5086 230 28 0 56 chr2 87682253 87682289 -163005565 + (TCTCCC)n Simple_repeat Simple_repeat 6 39 0 4392 128 62 17 chr2 87682290 87683544 -163004310 + SVA Other Other 2 868 -518 6056 102 37 30 chr2 87683584 87684532 -163003322 + SVA Other Other 432 1386 0 312 360 43 11 chr2 87684537 87684723 -163003131 - L1ME3A LINE L1 -1054 5092 4901 321 299 218 20 chr2 87685069 87685216 -163002638 + MER5B DNA MER1_type 3 178 0 350 272 150 69 chr2 87685457 87685703 -163002151 - L2 LINE L2 -8 3264 2999 1087 149 51 44 chr2 87685722 87685978 -163001876 + L1MB5 LINE L1 5134 5394 -779 2273 107 0 0 chr2 87685978 87686277 -163001577 + AluSq SINE Alu 1 299 -14 1087 149 51 44 chr2 87686277 87686314 -163001540 + L1MB5 LINE L1 5394 5429 -744 6137 96 41 28 chr2 87686315 87688375 -162999479 + SVA Other Other 13 1384 -2 1476 194 58 7 chr2 87688375 87688859 -162998995 + L1MB5 LINE L1 5415 6140 -31 1706 195 99 34 chr2 87688863 87688952 -162998902 - Charlie2 DNA MER1_type -416 2446 2364 2520 142 39 23 chr2 87688952 87689389 -162998465 - MER65A LTR ERV1 -1 444 1 1706 195 99 34 chr2 87689389 87689854 -162998000 - Charlie2 DNA MER1_type -498 2364 1856 610 314 63 40 chr2 87689823 87690126 -162997728 - Charlie2 DNA MER1_type -2436 346 37 * 1936 276 42 71 chr2 87691057 87692118 -162995736 + L1MEc LINE L1 100 1129 -5267 507 208 94 0 chr2 87692119 87692225 -162995629 - MER46A DNA MER2_type -117 119 4 * 584 167 76 68 chr2 87692225 87692319 -162995535 + MER46A DNA MER2_type 142 236 0 1097 269 138 41 chr2 87692320 87693053 -162994801 + L1MEc LINE L1 1136 1939 -4457 357 283 0 10 chr2 87693354 87693453 -162994401 + MIR SINE MIR 161 258 -4 931 230 26 13 chr2 87693644 87693870 -162993984 + L1ME3A LINE L1 5942 6170 0 331 223 14 101 chr2 87694097 87694236 -162993618 - L1ME4a LINE L1 -57 6064 1204 3796 147 26 19 chr2 87694264 87694905 -162992949 - L1MB3 LINE L1 -2 6181 5536 9669 214 77 22 chr2 87694909 87695552 -162992302 + L1MB3 LINE L1 543 1150 -5232 1564 160 114 18 chr2 87695552 87695833 -162992021 + AluJb SINE Alu 1 308 -4 9669 214 77 22 chr2 87695833 87696419 -162991435 + L1MB3 LINE L1 1150 1703 -4679 2765 7 0 13 chr2 87696419 87696727 -162991127 + AluYa5 SINE Alu 1 304 -7 9669 214 77 22 chr2 87696727 87696912 -162990942 + L1MB3 LINE L1 1703 1876 -4506 1962 119 4 11 chr2 87696912 87697190 -162990664 + AluSx SINE Alu 1 276 -36 9669 214 77 22 chr2 87697190 87697444 -162990410 + L1MB3 LINE L1 1876 2115 -4267 2051 144 7 0 chr2 87697444 87697743 -162990111 - AluJb SINE Alu -11 301 1 9669 214 77 22 chr2 87697743 87698222 -162989632 + L1MB3 LINE L1 2115 2566 -3816 2119 119 30 0 chr2 87698222 87698525 -162989329 + AluSx SINE Alu 1 312 0 9669 214 77 22 chr2 87698525 87698921 -162988933 + L1MB3 LINE L1 2566 2939 -3443 1581 164 38 17 chr2 87698921 87699208 -162988646 + AluJb SINE Alu 1 293 -19 9669 214 77 22 chr2 87699208 87701168 -162986686 + L1MB3 LINE L1 2939 5306 -1076 1063 169 30 0 chr2 87701182 87701348 -162986506 + FAM SINE Alu 1 171 -4 226 160 0 60 chr2 87701353 87701403 -162986451 + L1MB3 LINE L1 5370 5416 -966 918 152 0 0 chr2 87701409 87701547 -162986307 + FLAM_C SINE Alu 1 138 -5 4547 154 60 40 chr2 87701565 87702425 -162985429 + L1MB3 LINE L1 5411 6297 -122 2270 101 10 3 chr2 87702425 87702723 -162985131 + AluSq SINE Alu 1 300 -13 4547 154 60 40 chr2 87702723 87702849 -162985005 + L1MB3 LINE L1 6297 6419 0 799 230 17 45 chr2 87704216 87704394 -162983460 + FAM SINE Alu 1 173 -2 2093 140 0 0 chr2 87704731 87705039 -162982815 - AluSx SINE Alu -4 308 1 821 153 8 0 chr2 87705459 87705590 -162982264 - AluJb SINE Alu -180 132 1 23 0 0 0 chr2 87705633 87705656 -162982198 + AT_rich Low_complexity Low_complexity 1 23 0 843 136 8 8 chr2 87705849 87705981 -162981873 + AluJb SINE Alu 1 132 -180 198 0 0 0 chr2 87706034 87706056 -162981798 + (GA)n Simple_repeat Simple_repeat 2 23 0 485 258 211 27 chr2 87706063 87706426 -162981428 - L1ME1 LINE L1 -340 5826 5385 589 251 204 28 chr2 87706671 87706926 -162980928 + L2 LINE L2 2101 2400 -914 23 0 0 0 chr2 87706935 87706958 -162980896 + AT_rich Low_complexity Low_complexity 1 23 0 671 83 0 0 chr2 87707168 87707252 -162980602 - AluSg/x SINE Alu -13 296 213 559 211 106 64 chr2 87707846 87708018 -162979836 - L1MC5 LINE L1 -30 7931 7747 1923 157 28 64 chr2 87708018 87708375 -162979479 + MER2 DNA MER2_type 1 344 0 559 211 106 64 chr2 87708375 87708420 -162979434 - L1MC5 LINE L1 -214 7747 7705 301 290 136 18 chr2 87708438 87708607 -162979247 - HAL1 LINE L1 -1155 1352 1164 207 130 0 87 chr2 87708607 87708653 -162979201 + MIR SINE MIR 141 182 -80 318 277 91 32 chr2 87708726 87708946 -162978908 - HAL1 LINE L1 -1345 1162 930 220 204 20 0 chr2 87709007 87709056 -162978798 + GA-rich Low_complexity Low_complexity 2 51 0 505 319 119 44 chr2 87709142 87709597 -162978257 - L2 LINE L2 -1 3312 2824 3395 142 19 16 chr2 87710732 87711295 -162976559 + L1MB3 LINE L1 5603 6167 -16 1499 138 113 118 chr2 87711425 87711875 -162975979 - LTR7 LTR ERV1 -2 448 1 2431 103 96 23 chr2 87712132 87712529 -162975325 + MSTA LTR MaLR 1 426 -2 2182 97 31 0 chr2 87713336 87713626 -162974228 - AluSq SINE Alu -14 299 1 1200 193 0 27 chr2 87713921 87714144 -162973710 + MER20 DNA MER1_type 1 217 -2 1620 159 54 0 chr2 87714694 87714971 -162972883 - AluJb SINE Alu -20 292 1 2526 66 0 0 chr2 87715131 87715433 -162972421 - AluY SINE Alu -9 302 1 3238 146 32 29 chr2 87715593 87716153 -162971701 - L1MD1 LINE L1 0 6242 5681 1161 138 79 32 chr2 87716153 87716435 -162971419 - L1P5 LINE L1 -599 5552 5272 2143 107 30 3 chr2 87716543 87716842 -162971012 - AluSc SINE Alu -2 307 1 315 200 77 0 chr2 87717004 87717069 -162970785 - L2 LINE L2 -9 3263 3194 2111 98 18 3 chr2 87717097 87717405 -162970449 + AluSx SINE Alu 1 312 0 647 162 19 0 chr2 87717409 87717514 -162970340 + U6 snRNA snRNA 1 107 0 197 286 0 0 chr2 87717559 87717622 -162970232 - L2 LINE L2 -299 2973 2911 278 169 77 0 chr2 87717833 87717898 -162969956 - L1MB4 LINE L1 -7 6173 6104 21 36 0 0 chr2 87717898 87717926 -162969928 + AT_rich Low_complexity Low_complexity 1 28 0 183 320 204 0 chr2 87718043 87718146 -162969708 - L2 LINE L2 0 3313 3190 201 374 144 0 chr2 87718696 87718835 -162969019 - MIR3 SINE MIR -19 189 31 6519 131 39 7 chr2 87719035 87720153 -162967701 - L1MC1 LINE L1 0 6333 5180 1375 193 76 53 chr2 87720241 87720598 -162967256 - MLT1A1 LTR MaLR 0 365 1 183 208 19 75 chr2 87720882 87720935 -162966919 - L2 LINE L2 -1 3312 3263 57 66 0 0 chr2 87721108 87721214 -162966640 + AT_rich Low_complexity Low_complexity 1 106 0 24 0 0 0 chr2 87721278 87721302 -162966552 + AT_rich Low_complexity Low_complexity 1 24 0 403 147 15 29 chr2 87722680 87722748 -162965106 - MER58A DNA MER1_type -40 67 1 238 309 81 41 chr2 87722941 87723064 -162964790 - MIR SINE MIR -97 165 38 262 291 103 8 chr2 87723618 87723735 -162964119 + L2 LINE L2 3145 3272 0 630 270 125 42 chr2 87725468 87725555 -162962299 + L1ME4a LINE L1 5522 5600 -521 835 101 14 65 chr2 87725555 87725694 -162962160 + FLAM_C SINE Alu 2 133 0 630 270 125 42 chr2 87725694 87725808 -162962046 + L1ME4a LINE L1 5600 5703 -418 1590 142 96 28 chr2 87725808 87726090 -162961764 + AluJb SINE Alu 1 301 -11 630 270 125 42 chr2 87726090 87726224 -162961630 + L1ME4a LINE L1 5703 5886 -235 220 208 13 104 chr2 87727881 87727958 -162959896 - MIR SINE MIR -178 84 15 906 156 0 15 chr2 87728070 87728205 -162959649 + FLAM_C SINE Alu 1 133 0 2341 111 43 8 chr2 87728286 87728637 -162959217 - L1MC1 LINE L1 -1 6332 5970 1737 113 116 3 chr2 87728649 87728942 -162958912 - L1PA13 LINE L1 -21 6142 5817 * 3302 171 96 17 chr2 87728938 87729942 -162957912 - L1MC1 LINE L1 -350 5983 4868 1412 151 109 19 chr2 87729942 87730207 -162957647 - AluJb SINE Alu -23 289 1 3302 171 96 17 chr2 87730207 87730551 -162957303 - L1MC1 LINE L1 -1465 4868 4552 2091 127 182 3 chr2 87730864 87731227 -162956627 + MSTA LTR MaLR 1 428 0 10173 124 29 28 chr2 87731229 87732805 -162955049 + MSTA-int LTR MaLR 3 1580 0 2274 97 166 19 chr2 87732805 87733178 -162954676 + MSTA LTR MaLR 1 428 0 385 259 196 27 chr2 87734107 87734327 -162953527 + L1M4 LINE L1 -258 4294967294 -6282 4659 211 192 71 chr2 87734545 87734830 -162953024 + L1M4 LINE L1 946 1195 -5187 1918 130 3 20 chr2 87734830 87735123 -162952731 + AluJb SINE Alu 1 288 -24 4659 211 192 71 chr2 87735123 87735911 -162951943 + L1M4 LINE L1 1195 1887 -4495 1707 162 23 26 chr2 87735911 87736213 -162951641 + AluJo SINE Alu 1 301 -11 4659 211 192 71 chr2 87736213 87737182 -162950672 + L1M4 LINE L1 1887 2738 -3644 2321 87 0 0 chr2 87737182 87737469 -162950385 + AluSc SINE Alu 13 299 -10 4659 211 192 71 chr2 87737469 87737532 -162950322 + L1M4 LINE L1 2738 2792 -3590 1131 239 21 0 chr2 87737532 87737766 -162950088 - MLT1A1 LTR MaLR -126 239 1 4659 211 192 71 chr2 87737766 87739439 -162948415 + L1M4 LINE L1 2792 5340 -1042 183 319 80 44 chr2 87741081 87741194 -162946660 - MIR SINE MIR -74 134 18 376 280 95 86 chr2 87743495 87743738 -162944116 + L1MEd LINE L1 66 310 -5809 262 95 0 48 chr2 87744560 87744602 -162943252 + L1ME3 LINE L1 5912 5951 -211 388 252 7 93 chr2 87745063 87745214 -162942640 + MIR3 SINE MIR 15 152 -56 282 336 118 11 chr2 87746488 87746759 -162941095 + L1ME4a LINE L1 5739 6038 -83 243 288 12 12 chr2 87749145 87749225 -162938629 - Charlie8 DNA MER1_type -2244 173 94 476 245 236 9 chr2 87750966 87751178 -162936676 - L1M4 LINE L1 -1815 4331 4072 1382 122 0 63 chr2 87751232 87751470 -162936384 + AluSg/x SINE Alu 80 302 -8 291 340 0 19 chr2 87751671 87751777 -162936077 + MIR SINE MIR 54 157 -105 381 310 35 27 chr2 87753195 87753345 -162934509 - MIR SINE MIR -66 142 3 403 182 64 9 chr2 87756495 87756605 -162931249 + MER113 DNA MER1_type? 79 194 -327 369 0 0 0 chr2 87757961 87758002 -162929852 + (CA)n Simple_repeat Simple_repeat 2 42 0 2220 99 0 3 chr2 87758025 87758319 -162929535 - AluSx SINE Alu -15 297 5 1608 201 3 16 chr2 87758938 87759241 -162928613 - AluJb SINE Alu -13 299 1 1515 166 79 32 chr2 87759260 87759537 -162928317 + AluJo SINE Alu 3 292 -10 207 69 0 0 chr2 87759544 87759573 -162928281 + (CATA)n Simple_repeat Simple_repeat 2 30 0 300 186 0 0 chr2 87761303 87761362 -162926492 + (TA)n Simple_repeat Simple_repeat 2 60 0 311 294 0 22 chr2 87761363 87761455 -162926399 - L1MC4 LINE L1 -1339 6703 6614 31 44 0 0 chr2 87761571 87761616 -162926238 + GC_rich Low_complexity Low_complexity 1 45 0 1287 166 24 0 chr2 87761717 87761922 -162925932 - AluSx SINE Alu -44 268 59 1847 242 92 20 chr2 87761923 87762269 -162925585 - L1M4b LINE L1 -6318 541 148 2284 105 0 13 chr2 87762269 87762582 -162925272 - AluSg SINE Alu -1 309 1 1847 242 92 20 chr2 87762582 87762727 -162925127 - L1M4b LINE L1 -6711 148 15 622 245 20 7 chr2 87762775 87762926 -162924928 - LTR16A1 LTR ERVL -293 164 12 452 215 112 0 chr2 87762971 87763078 -162924776 + MER96 DNA MER1_type? 55 173 -2 2391 85 0 3 chr2 87763609 87763914 -162923940 + AluSc SINE Alu 1 304 -5 601 209 109 32 chr2 87763914 87764126 -162923728 + LTR16A1 LTR ERVL 213 444 -13 417 207 49 110 chr2 87764272 87764436 -162923418 - MLT1H1 LTR MaLR 0 555 402 768 125 34 10 chr2 87764533 87764742 -162923112 + CT-rich Low_complexity Low_complexity 1 214 0 877 138 0 0 chr2 87764743 87764859 -162922995 - AluJo SINE Alu -66 246 131 2217 108 0 10 chr2 87764868 87765164 -162922690 - AluSx SINE Alu -19 293 1 1948 119 3 31 chr2 87765286 87765580 -162922274 - AluSx SINE Alu -26 286 1 240 214 18 0 chr2 87765586 87765642 -162922212 - L1ME LINE L1 -397 5767 5711 345 366 35 0 chr2 87766589 87766731 -162921123 - L1M4c LINE L1 -4590 1794 1648 850 160 0 0 chr2 87766731 87766856 -162920998 - AluJo SINE Alu -177 125 1 7046 169 27 10 chr2 87766879 87768419 -162919435 - L1 LINE L1 -1824 4322 2756 215 238 0 0 chr2 87770168 87770210 -162917644 - L3 LINE CR1 -32 1545 1504 280 300 0 0 chr2 87771062 87771132 -162916722 - MIR SINE MIR -115 147 78 27 29 0 0 chr2 87771873 87771907 -162915947 + AT_rich Low_complexity Low_complexity 1 34 0 25 0 0 0 chr2 87771950 87771975 -162915879 + AT_rich Low_complexity Low_complexity 1 25 0 28 48 0 0 chr2 87772077 87772119 -162915735 + AT_rich Low_complexity Low_complexity 1 42 0 295 223 0 10 chr2 87773166 87773241 -162914613 - MIR SINE MIR -77 185 113 378 242 148 0 chr2 87773393 87773542 -162914312 + L1MC4a LINE L1 5754 5924 -1884 541 189 108 18 chr2 87773575 87773686 -162914168 + FLAM_C SINE Alu 1 121 -22 1987 170 61 61 chr2 87773981 87774440 -162913414 - MLT1D LTR MaLR -46 459 1 2565 161 6 26 chr2 87774858 87775355 -162912499 - L1MB5 LINE L1 -13 6161 5675 942 171 3 13 chr2 87775355 87775552 -162912302 - L1M4 LINE L1 -380 5771 5586 29 28 0 0 chr2 87775557 87775593 -162912261 + AT_rich Low_complexity Low_complexity 1 36 0 225 281 31 10 chr2 87775667 87775763 -162912091 - MLT1J LTR MaLR -8 503 406 258 250 69 0 chr2 87775829 87775901 -162911953 - MER81 DNA DNA 0 114 38 649 300 35 16 chr2 87775929 87776186 -162911668 - MLT1J LTR MaLR -247 264 3 561 30 0 0 chr2 87776371 87776438 -162911416 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 860 236 144 12 chr2 87776473 87776799 -162911055 - LTR33 LTR ERVL -2 519 151 33 66 0 0 chr2 87777085 87777146 -162910708 + AT_rich Low_complexity Low_complexity 1 61 0 1785 133 44 7 chr2 87777197 87777496 -162910358 - AluJo SINE Alu 0 309 1 356 288 121 40 chr2 87777729 87778052 -162909802 - MLT1K LTR MaLR -36 552 204 1229 157 46 113 chr2 87779392 87779781 -162908073 + MLT1A1 LTR MaLR 1 363 -2 3159 133 87 18 chr2 87779890 87780440 -162907414 + LTR69 LTR ERVL 1 588 0 352 65 0 0 chr2 87780527 87780573 -162907281 - MLT2B3 LTR ERVL 0 515 470 2004 140 3 60 chr2 87780573 87780666 -162907188 - MER47A DNA MER2_type -1958 365 268 2031 151 13 0 chr2 87780666 87780970 -162906884 + AluSx SINE Alu 1 308 -4 2004 140 3 60 chr2 87780970 87781262 -162906592 - MER47A DNA MER2_type -2055 268 2 420 67 0 0 chr2 87781262 87781322 -162906532 + (TC)n Simple_repeat Simple_repeat 2 61 0 2065 217 79 9 chr2 87781323 87781806 -162906048 - MLT2B3 LTR ERVL -45 505 1 2178 113 0 32 chr2 87781845 87782154 -162905700 + AluSx SINE Alu 14 312 0 344 314 74 11 chr2 87782402 87782577 -162905277 - MIR SINE MIR -30 232 47 1762 182 0 16 chr2 87782981 87783288 -162904566 - AluJo SINE Alu -10 302 1 216 97 0 0 chr2 87785057 87785088 -162902766 + (T)n Simple_repeat Simple_repeat 1 31 0 1649 161 0 53 chr2 87785318 87785640 -162902214 + AluJo SINE Alu 1 305 -7 29 0 0 0 chr2 87786757 87786786 -162901068 + AT_rich Low_complexity Low_complexity 1 29 0 1818 165 16 7 chr2 87787913 87788216 -162899638 - AluSx SINE Alu -6 306 1 606 310 148 30 chr2 87788832 87789558 -162898296 + L2 LINE L2 2480 3308 -5 223 227 0 0 chr2 87789728 87789772 -162898082 + GA-rich Low_complexity Low_complexity 2 45 0 221 291 134 63 chr2 87792453 87792580 -162895274 + L2 LINE L2 3134 3269 -3 1015 194 103 30 chr2 87793610 87793873 -162893981 + AluJo SINE Alu 1 282 -30 7834 188 46 49 chr2 87794143 87795098 -162892756 - L1MB7 LINE L1 -175 6245 5289 258 32 0 0 chr2 87795098 87795129 -162892725 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1455 188 21 56 chr2 87795132 87795420 -162892434 - AluJo SINE Alu -31 281 4 7834 188 46 49 chr2 87795420 87795710 -162892144 - L1MB7 LINE L1 -1133 5287 4998 1796 180 7 0 chr2 87795710 87795999 -162891855 - AluJo SINE Alu -21 291 1 7834 188 46 49 chr2 87795999 87796347 -162891507 - L1MB7 LINE L1 -1422 4998 4651 1375 226 6 45 chr2 87796347 87796661 -162891193 - AluJo SINE Alu -9 303 2 7834 188 46 49 chr2 87796661 87797094 -162890760 - L1MB7 LINE L1 -1769 4651 4218 1780 173 24 0 chr2 87797094 87797383 -162890471 - AluJb SINE Alu -16 296 1 7834 188 46 49 chr2 87797383 87798332 -162889522 - L1MB7 LINE L1 -2202 4218 3277 1359 105 0 0 chr2 87798332 87798513 -162889341 - AluSg/x SINE Alu -6 306 126 2610 57 0 0 chr2 87798513 87798829 -162889025 - AluYb8 SINE Alu -2 316 1 3187 226 34 38 chr2 87798830 87800118 -162887736 - L1MB7 LINE L1 -3101 3281 2017 356 0 0 19 chr2 87800470 87800523 -162887331 - THE1-int LTR MaLR -12 1568 1517 6330 205 11 28 chr2 87800526 87800635 -162887219 - L1 LINE L1 -3421 3787 3678 2039 161 0 0 chr2 87800635 87800934 -162886920 - AluJb SINE Alu -13 299 1 6330 205 11 28 chr2 87800934 87802933 -162884921 - L1 LINE L1 -3530 3678 1716 1918 259 98 35 chr2 87803119 87803871 -162883983 - L1 LINE L1 -6409 800 1 408 303 43 5 chr2 87803963 87804151 -162883703 - L1MCc LINE L1 -5101 1322 1128 246 200 20 0 chr2 87804164 87804214 -162883640 + MER96B DNA MER1_type? 1 51 -366 391 215 21 0 chr2 87804216 87804309 -162883545 - MER96B DNA MER1_type? -167 250 156 768 167 0 0 chr2 87804329 87804461 -162883393 - FLAM_C SINE Alu 0 143 12 636 123 58 70 chr2 87804471 87804642 -162883212 + MER96B DNA MER1_type? 248 416 -1 463 314 70 21 chr2 87804955 87805099 -162882755 - L1MCc LINE L1 -5998 425 290 842 138 0 51 chr2 87805099 87805263 -162882591 - FLAM_C SINE Alu 0 133 1 463 314 70 21 chr2 87805263 87805504 -162882350 - L1MCc LINE L1 -6133 290 21 1202 278 51 21 chr2 87806158 87806766 -162881088 - L1MEc LINE L1 -2593 3622 2997 374 209 12 0 chr2 87806922 87807008 -162880846 - L1MEc LINE L1 -3325 2890 2804 534 270 53 22 chr2 87807009 87807235 -162880619 - L1M4 LINE L1 -6297 245 13 917 219 33 8 chr2 87807247 87807489 -162880365 - L1MEc LINE L1 -4465 1931 1684 3241 224 59 73 chr2 87807497 87808902 -162878952 - L1MEc LINE L1 -4970 1426 41 342 379 18 26 chr2 87809291 87809518 -162878336 - LTR67 LTR ERVL -329 228 4 257 242 0 0 chr2 87809526 87809588 -162878266 + L1P LINE L1 4923 4984 -1162 324 327 93 0 chr2 87810062 87810212 -162877642 + MIR SINE MIR 10 173 -89 202 258 206 10 chr2 87810976 87811073 -162876781 + L2 LINE L2 2637 2752 -562 680 308 65 39 chr2 87811539 87812000 -162875854 - L2 LINE L2 -455 2859 2387 1164 229 249 1 chr2 87812089 87812760 -162875094 - L2 LINE L2 -19 3294 2459 23 0 0 0 chr2 87813125 87813148 -162874706 + AT_rich Low_complexity Low_complexity 1 23 0 1988 101 20 46 chr2 87813572 87813878 -162873976 - AluSx SINE Alu -14 298 1 189 0 0 0 chr2 87814615 87814636 -162873218 + (A)n Simple_repeat Simple_repeat 1 21 0 1896 140 6 34 chr2 87815069 87815390 -162872464 - AluJo SINE Alu 0 312 1 31 58 0 0 chr2 87815457 87815509 -162872345 + AT_rich Low_complexity Low_complexity 1 52 0 1239 118 269 37 chr2 87815518 87815763 -162872091 + AluSx SINE Alu 1 302 0 21 0 0 0 chr2 87816427 87816448 -162871406 + AT_rich Low_complexity Low_complexity 1 21 0 272 244 0 39 chr2 87818474 87818498 -162869356 + (TATG)n Simple_repeat Simple_repeat 2 25 -51 2762 193 88 26 chr2 87818498 87819109 -162868745 + MER82 DNA MER2_type 1 649 -4 272 244 0 39 chr2 87819109 87819162 -162868692 + (TATG)n Simple_repeat Simple_repeat 25 76 0 1945 195 101 2 chr2 87819374 87819769 -162868085 + Tigger2a DNA MER2_type 1 434 0 720 258 41 27 chr2 87820646 87820867 -162866987 - Charlie8 DNA MER1_type -2193 224 1 190 292 97 35 chr2 87820890 87821003 -162866851 - MIR3 SINE MIR -54 154 35 214 273 184 47 chr2 87822397 87822675 -162865179 + L2 LINE L2 2998 3313 0 339 147 59 0 chr2 87823261 87823329 -162864525 - Charlie4 DNA MER1_type -57 1904 1833 1866 180 0 0 chr2 87823941 87824236 -162863618 + AluJb SINE Alu 1 295 -17 2017 130 0 23 chr2 87824333 87824633 -162863221 - AluSx SINE Alu -19 293 1 192 184 0 82 chr2 87824755 87824804 -162863050 + L3 LINE CR1 1283 1327 -250 308 293 61 10 chr2 87825822 87825921 -162861933 - L2 LINE L2 -1 3312 3209 273 202 157 11 chr2 87825969 87826058 -162861796 + MIR SINE MIR 96 197 -65 310 56 93 37 chr2 87826498 87826552 -162861302 + FLAM SINE Alu 65 121 -12 212 278 110 72 chr2 87826792 87827001 -162860853 + MIR SINE MIR 29 245 -17 753 268 5 19 chr2 87827360 87827569 -162860285 + MIR SINE MIR 7 212 -50 24 53 0 0 chr2 87829446 87829484 -162858370 + GC_rich Low_complexity Low_complexity 1 38 0 848 287 45 8 chr2 87831139 87831606 -162856248 + L1M4 LINE L1 3847 4346 -1800 1861 147 24 24 chr2 87831973 87832266 -162855588 + AluSx SINE Alu 1 293 -19 192 281 37 55 chr2 87832805 87832969 -162854885 - L2 LINE L2 -1220 2094 1934 423 204 28 9 chr2 87833397 87833505 -162854349 - L1ME2 LINE L1 -10 6154 6045 655 221 84 13 chr2 87833505 87833659 -162854195 + MER58B DNA MER1_type 1 165 -176 29 84 0 0 chr2 87833672 87833743 -162854111 + AT_rich Low_complexity Low_complexity 1 71 0 896 116 0 39 chr2 87833743 87833872 -162853982 - FLAM_C SINE Alu -8 125 2 709 249 12 12 chr2 87833872 87834037 -162853817 + MER58B DNA MER1_type 171 335 -6 385 283 35 0 chr2 87834042 87834155 -162853699 - L1ME2 LINE L1 -111 6053 5937 2645 58 0 3 chr2 87834293 87834605 -162853249 - AluY SINE Alu 0 311 1 412 211 138 26 chr2 87834666 87834818 -162853036 - MIR SINE MIR -15 247 79 1820 102 0 0 chr2 87835786 87836021 -162851833 + AluSq SINE Alu 1 235 -78 2329 84 7 0 chr2 87836366 87836653 -162851201 - AluSg SINE Alu -21 289 1 438 278 8 0 chr2 87836658 87836784 -162851070 - L1M4 LINE L1 -3311 2835 2709 581 240 84 0 chr2 87836815 87836969 -162850885 - L1MC5 LINE L1 -76 7885 7719 371 276 24 71 chr2 87837184 87837354 -162850500 + MIR SINE MIR 35 196 -66 3982 284 36 25 chr2 87837537 87838841 -162849013 + ERVL LTR ERVL 3361 4679 -1085 635 101 0 0 chr2 87839001 87839080 -162848774 + AluS SINE Alu 2 80 -232 7692 45 7 5 chr2 87839081 87840586 -162847268 + L1PA7 LINE L1 4644 6151 -3 207 0 0 0 chr2 87840630 87840653 -162847201 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 6433 232 22 43 chr2 87840659 87842668 -162845186 + L1MC1 LINE L1 2838 4889 -1444 1874 168 0 3 chr2 87842668 87842965 -162844889 - AluSx SINE Alu -16 296 1 6433 232 22 43 chr2 87842965 87842988 -162844866 + L1MC1 LINE L1 4889 4911 -1422 1862 161 43 20 chr2 87842988 87843293 -162844561 + AluJo SINE Alu 1 312 0 6433 232 22 43 chr2 87843293 87844830 -162843024 + L1MC1 LINE L1 4911 6315 -18 360 0 0 0 chr2 87844833 87844873 -162842981 + (TG)n Simple_repeat Simple_repeat 2 41 0 2407 90 0 3 chr2 87846700 87847001 -162840853 - AluSg SINE Alu -10 300 1 733 204 31 40 chr2 87847255 87847480 -162840374 - MLT1J2 LTR MaLR -224 226 4 1826 191 101 66 chr2 87848104 87848618 -162839236 + L1MD2 LINE L1 5779 6310 -49 741 322 62 41 chr2 87848622 87849109 -162838745 + L1MA5 LINE L1 1216 1712 -5784 14662 175 28 67 chr2 87849204 87850648 -162837206 + L1MA5 LINE L1 2359 3857 -3862 2217 92 37 7 chr2 87850648 87850942 -162836912 + AluSx SINE Alu 3 305 -7 14662 175 28 67 chr2 87850942 87852897 -162834957 + L1MA5 LINE L1 3857 5885 -1834 2101 76 8 0 chr2 87852897 87853161 -162834693 + AluY SINE Alu 40 305 -6 14662 175 28 67 chr2 87853161 87853324 -162834530 + L1MA5 LINE L1 5885 6053 -1666 2153 112 3 3 chr2 87853324 87853618 -162834236 + AluSx SINE Alu 1 294 -18 14662 175 28 67 chr2 87853618 87854560 -162833294 + L1MA5 LINE L1 6053 7030 -689 2174 114 0 13 chr2 87854560 87854866 -162832988 + AluSx SINE Alu 1 302 -10 14662 175 28 67 chr2 87854866 87855254 -162832600 + L1MA5 LINE L1 7030 7082 -637 2373 128 16 34 chr2 87855254 87855636 -162832218 - THE1C LTR MaLR 0 375 1 14662 175 28 67 chr2 87855636 87855800 -162832054 + L1MA5 LINE L1 7082 7251 -468 1438 159 14 71 chr2 87855802 87856097 -162831757 + AluJb SINE Alu 1 278 -34 498 33 0 0 chr2 87856097 87856157 -162831697 + (GA)n Simple_repeat Simple_repeat 1 60 0 3077 115 19 19 chr2 87856157 87856637 -162831217 + L1MA5 LINE L1 7240 7719 0 510 326 48 25 chr2 87856842 87857323 -162830531 - L1MC4a LINE L1 -1979 5829 5338 493 201 78 52 chr2 87857853 87858007 -162829847 - L1MC5 LINE L1 -469 7492 7335 275 229 129 0 chr2 87858007 87858077 -162829777 + L2 LINE L2 2724 2802 -512 427 222 33 0 chr2 87858163 87858253 -162829601 - HERV16 LTR ERVL -4903 93 1 512 323 107 40 chr2 87858269 87858644 -162829210 - LTR16A LTR ERVL -26 424 25 265 179 36 0 chr2 87859050 87859106 -162828748 - MER3 DNA MER1_type -1 208 151 29 28 0 0 chr2 87859416 87859452 -162828402 + AT_rich Low_complexity Low_complexity 1 36 0 818 267 177 11 chr2 87860018 87860482 -162827372 - L1ME4a LINE L1 -3 6118 5578 1341 183 289 3 chr2 87860612 87860972 -162826882 + LTR41 LTR ERVL 1 463 -310 646 188 0 91 chr2 87861018 87861194 -162826660 + LTR41 LTR ERVL 608 767 -6 793 232 39 6 chr2 87862200 87862381 -162825473 - MER5A DNA MER1_type -1 188 2 191 247 164 27 chr2 87862530 87862603 -162825251 - L3 LINE CR1 -5 1572 1490 252 0 0 0 chr2 87862968 87862996 -162824858 + (T)n Simple_repeat Simple_repeat 1 28 0 305 179 26 64 chr2 87863207 87863285 -162824569 + MIR SINE MIR 50 124 -84 376 295 137 32 chr2 87863529 87863719 -162824135 - MIR SINE MIR -6 256 47 938 238 25 0 chr2 87864058 87864260 -162823594 + MIR SINE MIR 32 238 -24 455 261 33 54 chr2 87864411 87864595 -162823259 - MIR SINE MIR -27 235 56 1816 124 31 7 chr2 87864644 87864935 -162822919 + AluSx SINE Alu 1 298 -14 398 206 43 106 chr2 87865233 87865374 -162822480 - MIR SINE MIR 0 262 131 267 236 79 12 chr2 87865487 87865614 -162822240 + MIR SINE MIR 66 256 -6 2155 192 19 12 chr2 87866016 87866428 -162821426 - MLT1C LTR MaLR 0 467 53 2565 112 40 81 chr2 87866436 87866619 -162821235 + MSTA LTR MaLR 1 190 -238 1595 141 57 0 chr2 87866619 87866881 -162820973 + AluSg SINE Alu 1 277 -33 2565 112 40 81 chr2 87866881 87867143 -162820711 + MSTA LTR MaLR 190 428 0 2180 101 3 0 chr2 87867315 87867613 -162820241 - AluSx SINE Alu -13 299 1 1933 145 0 3 chr2 87868009 87868306 -162819548 - AluSq SINE Alu -17 296 1 1956 183 20 6 chr2 87868382 87868727 -162819127 - MLT1A1 LTR MaLR -15 350 1 2065 134 0 0 chr2 87868774 87869072 -162818782 - AluSx SINE Alu -14 298 1 1373 177 60 35 chr2 87869245 87869527 -162818327 + AluJo SINE Alu 1 289 -23 631 204 169 15 chr2 87869591 87869792 -162818062 + ORSL DNA AcHobo 44 275 0 326 253 38 31 chr2 87871061 87871085 -162816769 - L1MC4 LINE L1 -1340 6982 6960 2159 111 0 0 chr2 87871085 87871373 -162816481 + AluSx SINE Alu 1 288 -24 326 253 38 31 chr2 87871373 87871457 -162816397 - L1MC4 LINE L1 -1362 6960 1971 22 56 0 0 chr2 87871473 87871509 -162816345 + AT_rich Low_complexity Low_complexity 1 36 0 2737 205 7 19 chr2 87871893 87872435 -162815419 + MER82 DNA MER2_type 11 546 -107 2657 156 24 49 chr2 87872451 87872573 -162815281 - LTR42 LTR ERVL 0 495 371 4023 47 2 0 chr2 87872573 87873062 -162814792 + L1PA4 LINE L1 5666 6155 0 2657 156 24 49 chr2 87873062 87873447 -162814407 - LTR42 LTR ERVL -124 371 1 606 223 0 0 chr2 87873447 87873559 -162814295 + MER82 DNA MER2_type 542 653 0 301 236 32 73 chr2 87873878 87874001 -162813853 - MIR SINE MIR -51 211 94 774 199 0 41 chr2 87874169 87874340 -162813514 - L2 LINE L2 0 3313 3150 1586 101 50 0 chr2 87874407 87874626 -162813228 - MER30 DNA MER1_type 0 230 1 2957 195 53 0 chr2 87874874 87875443 -162812411 + MLT2F LTR ERVL 5 603 -60 680 71 10 0 chr2 87875474 87875573 -162812281 + (TAGA)n Simple_repeat Simple_repeat 3 102 0 435 256 31 39 chr2 87876592 87876721 -162811133 - L2 LINE L2 0 3313 3186 1724 236 43 53 chr2 87876873 87876930 -162810924 - L1ME1 LINE L1 -4 6162 6106 1795 120 33 0 chr2 87876930 87877237 -162810617 - AluSx SINE Alu 0 317 2 1724 236 43 53 chr2 87877237 87877762 -162810092 - L1ME1 LINE L1 -60 6106 5585 844 258 19 1 chr2 87877791 87878010 -162809844 - L1ME1 LINE L1 -551 5613 5376 989 191 27 16 chr2 87878010 87878193 -162809661 - MIR SINE MIR -65 197 13 2513 152 80 50 chr2 87878724 87879262 -162808592 - MLT2B3 LTR ERVL 0 554 1 1521 181 4 18 chr2 87879576 87879853 -162808001 + AluJo SINE Alu 1 273 -39 411 21 0 0 chr2 87879853 87879901 -162807953 + (TC)n Simple_repeat Simple_repeat 2 49 0 * 666 96 22 0 chr2 87879900 87880035 -162807819 + (TA)n Simple_repeat Simple_repeat 1 138 0 2475 209 79 15 chr2 87880249 87880794 -162807060 - MLT1G LTR MaLR -10 580 1 262 282 154 0 chr2 87880804 87880914 -162806940 - MIR SINE MIR -62 200 74 1874 109 27 34 chr2 87881364 87881658 -162806196 + AluSx SINE Alu 3 294 -18 241 261 130 43 chr2 87882026 87882118 -162805736 - MLT1K LTR MaLR -306 282 183 1956 119 0 49 chr2 87882463 87882791 -162805063 - AluSx SINE Alu 0 312 1 1685 208 60 27 chr2 87883230 87883678 -162804176 + MLT1C LTR MaLR 1 463 -4 694 277 152 10 chr2 87883704 87884190 -162803664 + MLT1L LTR MaLR 7 615 0 216 354 30 0 chr2 87884198 87884297 -162803557 + L3 LINE CR1 719 820 -757 877 132 7 7 chr2 87884298 87884434 -162803420 + U8 snRNA snRNA 1 136 0 423 199 83 111 chr2 87884504 87884827 -162803027 + L1ME LINE L1 5123 5442 -824 3866 250 63 16 chr2 87884828 87884933 -162802921 - MER69B DNA AcHobo -1300 1226 1127 4180 72 8 75 chr2 87884933 87885588 -162802266 + SVA Other Other 775 1385 -1 3866 250 63 16 chr2 87885588 87886582 -162801272 - MER69B DNA AcHobo -1399 1127 76 541 221 30 103 chr2 87887135 87887296 -162800558 + L1ME LINE L1 5558 5694 -427 729 186 0 16 chr2 87887296 87887425 -162800429 - FLAM_A SINE Alu -6 127 1 541 221 30 103 chr2 87887425 87887526 -162800328 + L1ME LINE L1 5694 5801 -320 770 295 107 59 chr2 87887553 87888408 -162799446 + L1M4 LINE L1 4432 5325 -821 2565 172 83 77 chr2 87888478 87889018 -162798836 - L1ME1 LINE L1 -5 6161 5703 2050 130 3 0 chr2 87889018 87889317 -162798537 + AluSx SINE Alu 1 300 -12 2565 172 83 77 chr2 87889317 87889731 -162798123 - L1ME1 LINE L1 -463 5703 5293 * 2577 253 32 26 chr2 87889708 87890514 -162797340 - L1MEc LINE L1 -5466 930 120 2111 101 0 16 chr2 87890516 87890822 -162797032 + AluY SINE Alu 2 302 -9 268 306 36 27 chr2 87890901 87891012 -162796842 - MLT1K LTR MaLR -287 301 190 183 80 0 0 chr2 87891338 87891363 -162796491 + (TTTC)n Simple_repeat Simple_repeat 1 25 0 1226 191 68 22 chr2 87891853 87892286 -162795568 - MER74A LTR ERVL -30 528 2 481 184 8 88 chr2 87892615 87892705 -162795149 - MER96B DNA MER1_type? -3 414 335 2140 67 42 0 chr2 87892705 87892990 -162794864 + AluSg SINE Alu 11 307 -3 481 184 8 88 chr2 87892990 87893024 -162794830 - MER96B DNA MER1_type? -82 335 300 226 260 0 0 chr2 87893054 87893104 -162794750 + MER96B DNA MER1_type? 193 242 -175 33 43 0 0 chr2 87893764 87893811 -162794043 + GC_rich Low_complexity Low_complexity 1 47 0 200 156 0 78 chr2 87893920 87893984 -162793870 + (CCCG)n Simple_repeat Simple_repeat 3 61 0 25 31 0 0 chr2 87894056 87894088 -162793766 + GC_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr2 87894403 87894429 -162793425 + GC_rich Low_complexity Low_complexity 1 26 0 2349 60 0 7 chr2 87895625 87895926 -162791928 - AluSg SINE Alu -11 299 1 330 275 29 23 chr2 87896223 87896394 -162791460 - L1ME4a LINE L1 -18 6103 5932 187 188 266 62 chr2 87896897 87897025 -162790829 - MIR3 SINE MIR -48 160 7 204 247 14 130 chr2 87897294 87897440 -162790414 + L2 LINE L2 3139 3267 -5 184 222 0 56 chr2 87898385 87898439 -162789415 + L2 LINE L2 3214 3264 -8 253 316 53 26 chr2 87898441 87898555 -162789299 + MIR3 SINE MIR 14 130 -78 378 134 0 0 chr2 87898991 87899058 -162788796 + (TG)n Simple_repeat Simple_repeat 2 68 0 456 273 140 54 chr2 87900132 87900410 -162787444 + MLT1K LTR MaLR 126 427 -161 842 215 77 90 chr2 87900559 87900750 -162787104 - MLT1I LTR MaLR -7 402 210 1754 131 11 7 chr2 87900750 87901032 -162786822 + AluJb SINE Alu 1 283 -29 432 0 0 0 chr2 87901032 87901080 -162786774 + (CA)n Simple_repeat Simple_repeat 2 49 0 842 215 77 90 chr2 87901080 87901199 -162786655 - MLT1I LTR MaLR -197 212 95 215 321 18 73 chr2 87901516 87901625 -162786229 + L2 LINE L2 3030 3132 -140 350 208 42 0 chr2 87901732 87901804 -162786050 + MER5A DNA MER1_type 7 81 -108 2078 147 141 59 chr2 87902087 87902797 -162785057 + LTR1B LTR ERV1 1 826 0 2090 101 7 3 chr2 87902798 87903095 -162784759 - AluSc SINE Alu -11 298 1 852 296 111 14 chr2 87903435 87903628 -162784226 + L2 LINE L2 2493 2666 -648 2296 81 0 0 chr2 87903628 87903926 -162783928 + AluY SINE Alu 1 298 -13 852 296 111 14 chr2 87903926 87904147 -162783707 + L2 LINE L2 2666 2947 -367 24 0 0 0 chr2 87904147 87904171 -162783683 + AT_rich Low_complexity Low_complexity 1 24 0 363 270 42 95 chr2 87904173 87904362 -162783492 + L1MEd LINE L1 791 969 -5150 297 316 96 7 chr2 87904407 87904543 -162783311 - MIR3 SINE MIR -18 190 43 385 318 81 17 chr2 87904543 87904716 -162783138 + L3 LINE CR1 1256 1439 -138 2207 105 3 0 chr2 87904758 87905064 -162782790 - AluSq SINE Alu -6 307 1 200 209 0 0 chr2 87905172 87905215 -162782639 + (ATTG)n Simple_repeat Simple_repeat 3 45 0 228 264 28 14 chr2 87905306 87905378 -162782476 - MIR SINE MIR -116 92 20 2020 183 92 55 chr2 87905630 87906117 -162781737 - MLT1D LTR MaLR 0 505 1 811 208 0 23 chr2 87906221 87906394 -162781460 - FRAM SINE Alu -8 168 1 349 277 38 58 chr2 87906563 87906764 -162781090 - L1ME LINE L1 -366 5798 5591 363 329 6 6 chr2 87906764 87906928 -162780926 - L1ME LINE L1 -1285 4861 4698 1408 253 82 31 chr2 87906930 87907792 -162780062 - L1ME LINE L1 -581 5564 4658 2153 125 27 33 chr2 87907792 87908128 -162779726 - MER1B DNA MER1_type 0 337 4 1408 253 82 31 chr2 87908128 87908174 -162779680 - L1ME LINE L1 -1487 4658 4616 1298 163 0 73 chr2 87908268 87908556 -162779298 - AluJo SINE Alu -6 306 40 833 182 38 6 chr2 87908567 87908726 -162779128 - AluJo SINE Alu -17 295 132 1298 150 0 35 chr2 87908741 87908967 -162778887 + AluJb SINE Alu 1 218 -94 802 152 23 0 chr2 87908972 87909104 -162778750 + AluJb SINE Alu 158 292 -20 773 172 0 0 chr2 87909104 87909232 -162778622 - AluJo SINE Alu -173 129 2 422 222 68 43 chr2 87909235 87909442 -162778412 - L1ME LINE L1 -1586 4543 4332 1401 281 107 26 chr2 87909465 87910203 -162777651 - L1ME LINE L1 -1892 4237 3440 1384 264 78 84 chr2 87910274 87910375 -162777479 - L1ME LINE L1 -4949 1170 1070 2104 80 14 11 chr2 87910375 87910662 -162777192 + AluSq SINE Alu 1 288 -25 1384 264 78 84 chr2 87910662 87911397 -162776457 - L1ME LINE L1 -5049 1070 339 1778 191 60 6 chr2 87911397 87911763 -162776091 - MLT1C LTR MaLR 0 467 82 1564 143 8 8 chr2 87911770 87912021 -162775833 - AluSx SINE Alu 0 312 62 393 221 42 0 chr2 87912054 87912149 -162775705 - MLT1C LTR MaLR -368 99 1 807 222 21 21 chr2 87912181 87912370 -162775484 + MER5A DNA MER1_type 1 189 0 348 296 28 21 chr2 87912628 87912770 -162775084 - L1MC4 LINE L1 -99 7943 7801 2301 93 3 0 chr2 87912797 87913108 -162774746 + AluSx SINE Alu 1 312 0 3778 194 88 10 chr2 87913189 87914056 -162773798 - Charlie1a DNA MER1_type -499 956 23 335 277 31 67 chr2 87914096 87914291 -162773563 - L1MC5 LINE L1 -258 7703 7516 339 332 50 10 chr2 87914313 87914515 -162773339 - L1MC4 LINE L1 -477 7565 7356 2204 100 0 0 chr2 87914628 87914918 -162772936 - AluSq SINE Alu -23 290 1 2230 99 0 29 chr2 87914925 87915238 -162772616 - AluSq SINE Alu -9 304 1 304 299 101 86 chr2 87915316 87915771 -162772083 - MLT1L LTR MaLR -77 511 50 189 326 75 48 chr2 87916006 87916153 -162771701 - MIR SINE MIR -51 211 61 1538 162 0 68 chr2 87916502 87916823 -162771031 + AluJo SINE Alu 1 299 -13 683 245 153 16 chr2 87917477 87917726 -162770128 + Charlie8 DNA MER1_type 4 286 -2131 224 276 53 13 chr2 87917802 87917878 -162769976 - MIR SINE MIR -78 184 106 392 306 9 19 chr2 87917911 87918019 -162769835 + MIR3 SINE MIR 52 158 -50 1112 142 0 118 chr2 87918140 87918386 -162769468 + AluJo SINE Alu 85 301 -11 511 300 29 0 chr2 87918699 87918839 -162769015 - MIR SINE MIR -27 235 92 640 140 0 0 chr2 87918841 87918934 -162768920 - FRAM SINE Alu -13 163 71 248 374 17 26 chr2 87919510 87919625 -162768229 - L3 LINE CR1 -4 1573 1460 1859 218 57 7 chr2 87919711 87920151 -162767703 + MLT1C LTR MaLR 6 467 0 214 279 81 66 chr2 87920192 87920328 -162767526 - L3 LINE CR1 -1190 387 250 183 80 0 0 chr2 87920742 87920767 -162767087 + (CA)n Simple_repeat Simple_repeat 2 26 0 219 139 0 0 chr2 87920767 87920803 -162767051 + (GA)n Simple_repeat Simple_repeat 1 36 0 1986 149 63 0 chr2 87920934 87921249 -162766605 - MER7A DNA MER2_type 0 346 14 302 330 66 9 chr2 87921296 87921402 -162766452 - L2 LINE L2 -23 3249 3138 268 224 0 17 chr2 87921522 87921580 -162766274 + MLT1K LTR MaLR 186 242 -346 1684 214 6 28 chr2 87921633 87921988 -162765866 + MLT1A2 LTR MaLR 24 370 -4 1396 143 75 23 chr2 87922084 87922350 -162765504 + MER73 LTR ERVL 16 295 -349 822 145 0 0 chr2 87922359 87922483 -162765371 + MER73 LTR ERVL 521 644 0 329 241 13 0 chr2 87922655 87922734 -162765120 + MLT1K LTR MaLR 509 588 0 302 228 78 3 chr2 87922734 87922850 -162765004 - MIR SINE MIR -60 148 25 1082 139 0 65 chr2 87922950 87923151 -162764703 - AluSg/x SINE Alu -40 272 85 402 244 87 140 chr2 87923488 87923745 -162764109 - L1ME4a LINE L1 -21 6100 5884 1574 145 126 4 chr2 87923745 87924014 -162763840 - AluJb SINE Alu 0 302 1 402 244 87 140 chr2 87924014 87924276 -162763578 - L1ME4a LINE L1 -237 5884 5609 2149 95 10 0 chr2 87924277 87924572 -162763282 - AluSx SINE Alu -14 298 1 567 128 224 19 chr2 87925391 87925547 -162762307 + L1ME LINE L1 5537 5724 -442 791 167 14 0 chr2 87925850 87925988 -162761866 + MER5A DNA MER1_type 50 189 0 292 279 0 0 chr2 87926194 87926262 -162761592 - MLT1K LTR MaLR -12 576 509 246 255 125 60 chr2 87926894 87927078 -162760776 + L3 LINE CR1 1377 1572 -5 344 293 38 66 chr2 87927604 87927816 -162760038 + L2 LINE L2 2851 3056 -216 1497 169 3 45 chr2 87927831 87927976 -162759878 + AluJo SINE Alu 1 128 -184 1977 126 7 10 chr2 87927976 87928285 -162759569 + AluSx SINE Alu 1 308 -4 1497 169 3 45 chr2 87928285 87928447 -162759407 + AluJo SINE Alu 128 295 -17 230 200 0 33 chr2 87928641 87928701 -162759153 - L1ME4a LINE L1 -56 6065 6008 732 272 62 0 chr2 87928864 87929088 -162758766 - L1ME4a LINE L1 -359 5762 5525 536 286 110 0 chr2 87929975 87930129 -162757725 - MIR SINE MIR -71 191 21 272 319 138 31 chr2 87931215 87931469 -162756385 + L3 LINE CR1 1268 1548 -29 243 228 79 20 chr2 87931600 87931701 -162756153 + L1ME4a LINE L1 5988 6094 -27 847 190 162 0 chr2 87932040 87932219 -162755635 + MER20 DNA MER1_type 1 208 -11 269 244 12 58 chr2 87933000 87933086 -162754768 + L2 LINE L2 3232 3313 0 * 337 260 55 24 chr2 87933084 87933211 -162754643 - MIR3 SINE MIR -75 133 3 228 294 62 75 chr2 87934109 87934255 -162753599 - MIR3 SINE MIR -45 163 20 404 316 52 56 chr2 87934433 87934622 -162753232 + Charlie7 DNA MER1_type 170 359 -2253 2227 104 0 0 chr2 87934622 87934920 -162752934 - AluSq SINE Alu -15 298 1 404 316 52 56 chr2 87934920 87935018 -162752836 + Charlie7 DNA MER1_type 359 456 -2156 492 291 70 0 chr2 87935091 87935249 -162752605 + MIR SINE MIR 53 221 -41 2159 76 0 47 chr2 87935656 87935973 -162751881 + AluY SINE Alu 1 302 -9 201 74 0 0 chr2 87936429 87936456 -162751398 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 423 0 0 0 chr2 87936724 87936771 -162751083 + (TCTA)n Simple_repeat Simple_repeat 1 47 0 2267 124 83 65 chr2 87937175 87937668 -162750186 - L1MB2 LINE L1 0 6171 5670 1011 207 19 19 chr2 87937903 87938116 -162749738 - L1ME1 LINE L1 -16 6150 5938 234 307 40 0 chr2 87938253 87938328 -162749526 + MIR SINE MIR 16 93 -169 246 235 0 0 chr2 87938337 87938388 -162749466 + L2 LINE L2 3262 3312 -1 261 0 0 0 chr2 87938394 87938423 -162749431 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 257 317 37 0 chr2 87938423 87938505 -162749349 + MIR SINE MIR 102 186 -76 244 186 0 0 chr2 87939094 87939137 -162748717 + L2 LINE L2 3270 3312 -1 356 350 81 0 chr2 87939258 87939418 -162748436 - MIR SINE MIR -70 192 20 246 343 91 18 chr2 87939730 87939915 -162747939 + MIR SINE MIR 3 198 -58 319 291 170 12 chr2 87940323 87940488 -162747366 + MIR SINE MIR 2 192 -70 236 224 86 59 chr2 87941031 87941066 -162746788 - L1MA10 LINE L1 0 6334 6300 890 235 27 51 chr2 87941066 87941281 -162746573 - L1ME1 LINE L1 -30 6136 5928 1610 109 0 0 chr2 87941281 87941502 -162746352 + AluSg/x SINE Alu 84 304 -8 890 235 27 51 chr2 87941502 87941580 -162746274 - L1ME1 LINE L1 -238 5928 5850 1139 264 115 60 chr2 87941628 87943040 -162744814 + L1ME3A LINE L1 4317 5650 -520 625 192 16 24 chr2 87943040 87943165 -162744689 + FLAM_A SINE Alu 2 125 -8 2084 121 3 3 chr2 87943173 87943480 -162744374 + AluSx SINE Alu 1 307 -5 1139 264 115 60 chr2 87943480 87943618 -162744236 + L1ME3A LINE L1 5656 5948 -222 1886 152 3 0 chr2 87944107 87944397 -162743457 + AluSx SINE Alu 1 291 -21 1104 160 63 5 chr2 87945046 87945252 -162742602 - MER20 DNA MER1_type -1 218 1 180 290 32 32 chr2 87945715 87945777 -162742077 - L2 LINE L2 -6 3266 3205 676 286 52 4 chr2 87945847 87946078 -162741776 + MIR SINE MIR 21 262 0 240 285 91 91 chr2 87947047 87947356 -162740498 - L2 LINE L2 -1 3271 2963 251 322 14 63 chr2 87947590 87947733 -162740121 + MIR SINE MIR 9 144 -118 604 285 89 70 chr2 87948196 87948554 -162739300 - L2 LINE L2 0 3272 2908 210 267 0 0 chr2 87949596 87949641 -162738213 + MIR SINE MIR 97 141 -67 217 319 0 14 chr2 87949677 87949746 -162738108 + MIR SINE MIR 3 70 -192 2020 107 7 0 chr2 87949856 87950145 -162737709 - AluSg SINE Alu -19 291 1 289 345 14 36 chr2 87950393 87950532 -162737322 + MIR SINE MIR 20 155 -107 300 343 78 39 chr2 87951364 87951550 -162736304 + L2 LINE L2 2434 2611 -703 1911 200 96 23 chr2 87951550 87952021 -162735833 - MLT1D LTR MaLR 0 505 1 300 343 78 39 chr2 87952021 87952219 -162735635 + L2 LINE L2 2611 2833 -481 305 203 43 0 chr2 87952259 87952328 -162735526 + MER5A DNA MER1_type 9 80 -109 446 224 35 17 chr2 87952350 87952466 -162735388 - MER74A LTR ERVL -55 503 386 25 31 0 0 chr2 87953209 87953241 -162734613 + AT_rich Low_complexity Low_complexity 1 32 0 1431 215 64 33 chr2 87953330 87953721 -162734133 - LTR37A LTR ERV1 0 426 24 782 292 33 45 chr2 87953766 87953922 -162733932 - ERVL LTR ERVL -368 5286 5130 2112 102 3 3 chr2 87953922 87954216 -162733638 - AluSx SINE Alu -13 299 6 782 292 33 45 chr2 87954216 87954566 -162733288 - ERVL LTR ERVL -524 5130 4801 728 205 154 0 chr2 87954569 87954725 -162733129 - MER5A DNA MER1_type 0 189 10 2023 306 42 19 chr2 87954765 87955567 -162732287 - ERVL LTR ERVL -954 4810 3990 275 208 28 14 chr2 87955650 87955722 -162732132 - MER74B LTR ERVL 0 622 550 1910 211 75 5 chr2 87955752 87956165 -162731689 - MER74A LTR ERVL -116 442 1 523 249 209 0 chr2 87956194 87956395 -162731459 - ERVL LTR ERVL -1907 3857 3615 460 346 107 7 chr2 87957508 87957788 -162730066 - L2 LINE L2 0 3313 3006 457 346 28 70 chr2 87957830 87957912 -162729942 - L2 LINE L2 -424 2890 2806 1757 147 7 20 chr2 87957912 87958212 -162729642 + AluJb SINE Alu 4 299 -13 457 346 28 70 chr2 87958212 87958339 -162729515 - L2 LINE L2 -508 2806 2675 1724 140 0 57 chr2 87958339 87958654 -162729200 - AluJb SINE Alu -15 297 1 457 346 28 70 chr2 87958654 87958874 -162728980 - L2 LINE L2 -639 2675 2478 180 305 178 54 chr2 87958939 87959254 -162728600 - L2 LINE L2 -1215 2099 1746 2045 115 3 0 chr2 87959266 87959554 -162728300 - AluSq SINE Alu -24 289 1 771 259 52 91 chr2 87959930 87960259 -162727595 - L1MCa LINE L1 -4765 1661 1321 1652 147 0 8 chr2 87960259 87960553 -162727301 - AluSx SINE Alu 0 312 33 771 259 52 91 chr2 87960553 87960991 -162726863 - L1MCa LINE L1 -5105 1321 924 2106 97 7 0 chr2 87961000 87961330 -162726524 + AluSp SINE Alu 1 313 0 957 142 7 5 chr2 87961415 87961599 -162726255 - L1M LINE L1 -777 5369 5207 582 181 77 13 chr2 87961604 87961759 -162726095 - L1M4 LINE L1 -830 5250 5086 654 182 8 0 chr2 87961773 87961894 -162725960 - MER4B LTR ERV1 -488 122 1 926 125 26 0 chr2 87962178 87962330 -162725524 - LTR54 LTR ERV1 -5 505 350 4073 253 30 27 chr2 87962330 87963566 -162724288 - L1M4 LINE L1 -979 5101 3862 952 178 11 0 chr2 87963604 87963795 -162724059 - L1M4 LINE L1 -814 5332 5140 1408 160 0 41 chr2 87963795 87963989 -162723865 - AluJo SINE Alu -16 296 114 2039 124 42 55 chr2 87963989 87964369 -162723485 - THE1C LTR MaLR 0 375 1 1408 160 0 41 chr2 87964369 87964442 -162723412 - AluJo SINE Alu -198 114 40 2269 100 0 0 chr2 87964460 87964769 -162723085 - AluY SINE Alu -2 309 1 769 199 38 9 chr2 87964814 87964839 -162723015 - L1M4 LINE L1 -1006 5140 5117 2745 22 0 0 chr2 87964839 87965157 -162722697 - AluYb8 SINE Alu 0 318 1 769 199 38 9 chr2 87965157 87965342 -162722512 - L1M4 LINE L1 -1029 5117 4924 449 295 70 15 chr2 87965321 87965546 -162722308 - L1MEc LINE L1 -5314 800 480 * 2689 110 24 50 chr2 87965546 87966010 -162721844 - L1PB4 LINE L1 0 6156 5705 449 295 70 15 chr2 87966010 87966037 -162721817 - L1MEc LINE L1 -5634 480 456 720 340 34 25 chr2 87966365 87966803 -162721051 - L1MEc LINE L1 -5624 446 5 290 294 11 22 chr2 87967692 87967784 -162720070 - L2 LINE L2 -2 3270 3180 2131 101 0 31 chr2 87967961 87968271 -162719583 + AluSx SINE Alu 6 306 0 454 233 17 0 chr2 87968412 87968532 -162719322 - L1ME4a LINE L1 -296 5825 5704 8682 51 0 0 chr2 87969227 87970196 -162717658 - LTR5 LTR ERVK 0 969 1 1615 181 66 39 chr2 87970552 87971035 -162716819 - MLT1E2 LTR MaLR -2 624 152 2412 93 3 6 chr2 87971807 87972120 -162715734 + AluSx SINE Alu 1 312 0 1738 90 73 4 chr2 87972236 87972469 -162715385 - AluSc SINE Alu -60 249 1 1153 195 18 14 chr2 87973029 87973250 -162714604 - MER58A DNA MER1_type -2 222 1 322 283 104 108 chr2 87973448 87973573 -162714281 + L1MC4a LINE L1 5686 5810 -1998 2151 91 60 7 chr2 87973573 87973858 -162713996 + AluSx SINE Alu 1 300 -12 322 283 104 108 chr2 87973858 87974011 -162713843 + L1MC4a LINE L1 5810 5963 -1845 1902 214 39 39 chr2 87974687 87975125 -162712729 - MER74A LTR ERVL -1 557 117 2437 86 0 3 chr2 87975125 87975428 -162712426 - AluSg SINE Alu -8 302 1 1902 214 39 39 chr2 87975428 87975535 -162712319 - MER74A LTR ERVL -440 118 12 528 300 94 22 chr2 87975564 87975744 -162712110 + MER91A DNA MER1_type 3 195 -1 297 315 18 36 chr2 87975836 87975947 -162711907 + L2 LINE L2 3136 3244 -28 791 204 0 0 chr2 87977165 87977297 -162710557 + FLAM_A SINE Alu 1 132 -1 28 71 0 0 chr2 87977298 87977354 -162710500 + AT_rich Low_complexity Low_complexity 1 56 0 249 387 26 0 chr2 87977431 87977586 -162710268 - L1ME LINE L1 -359 5762 5604 2136 105 4 0 chr2 87978218 87978495 -162709359 - AluSx SINE Alu -34 278 1 516 287 133 5 chr2 87978878 87979066 -162708788 - MIR SINE MIR -12 250 39 344 283 29 23 chr2 87981810 87981970 -162705884 + MER5A DNA MER1_type 1 162 -16 2199 97 0 4 chr2 87982222 87982500 -162705354 - AluSx SINE Alu -17 295 19 215 175 35 18 chr2 87982519 87982576 -162705278 + L2 LINE L2 3205 3262 -10 483 184 7 129 chr2 87982641 87982745 -162705109 + MER94 DNA DNA 1 85 -49 2005 137 3 11 chr2 87982745 87983077 -162704777 + AluJb SINE Alu 1 330 0 483 184 7 129 chr2 87983077 87983118 -162704736 + MER94 DNA DNA 85 129 -5 2056 114 38 14 chr2 87983624 87983937 -162703917 + AluSx SINE Alu 1 320 0 630 236 16 0 chr2 87983954 87984077 -162703777 - FLAM_A SINE Alu -8 125 1 2388 104 10 0 chr2 87984494 87984803 -162703051 + AluSp SINE Alu 1 312 -1 633 193 50 92 chr2 87985357 87985431 -162702423 - MER3 DNA MER1_type 0 209 133 2617 50 0 0 chr2 87985431 87985730 -162702124 + AluY SINE Alu 1 299 -12 4359 65 5 20 chr2 87985739 87986295 -162701559 - LTR14 LTR ERVK 0 548 1 633 193 50 92 chr2 87986295 87986341 -162701513 - MER3 DNA MER1_type -84 125 79 2209 89 10 7 chr2 87986341 87986632 -162701222 - AluSq SINE Alu -21 292 1 633 193 50 92 chr2 87986632 87986718 -162701136 - MER3 DNA MER1_type -130 79 1 231 241 109 92 chr2 87988883 87989057 -162698797 + L2 LINE L2 2915 3091 -181 362 269 172 8 chr2 87989257 87989391 -162698463 + MIR SINE MIR 107 262 0 367 211 98 38 chr2 87989744 87989877 -162697977 - MIR3 SINE MIR -61 147 7 252 360 66 15 chr2 87991171 87991307 -162696547 + L2 LINE L2 3171 3313 0 225 0 0 0 chr2 87992261 87992286 -162695568 + (T)n Simple_repeat Simple_repeat 1 25 0 255 321 83 0 chr2 87992964 87993048 -162694806 - L2 LINE L2 -1 3312 3222 1477 213 154 59 chr2 87993165 87993283 -162694571 - HsTC2a DNA Tc2 -1156 744 639 2390 106 3 0 chr2 87993283 87993595 -162694259 - AluSp SINE Alu 0 313 1 1477 213 154 59 chr2 87993595 87993675 -162694179 - HsTC2a DNA Tc2 -1261 639 568 2219 127 10 0 chr2 87993675 87993983 -162693871 + AluSq SINE Alu 1 311 -2 1477 213 154 59 chr2 87993983 87994458 -162693396 - HsTC2a DNA Tc2 -1332 568 6 2511 51 7 0 chr2 87994462 87994756 -162693098 + AluY SINE Alu 2 297 -14 665 149 9 0 chr2 87994848 87994955 -162692899 - FLAM_C SINE Alu -25 118 11 267 244 77 0 chr2 87994960 87995038 -162692816 + MER103 DNA DNA 68 151 -15 2400 88 3 3 chr2 87995263 87995560 -162692294 - AluSq SINE Alu -16 297 1 418 323 148 14 chr2 87996031 87996248 -162691606 - MIR SINE MIR -1 261 16 192 289 145 12 chr2 87996327 87996410 -162691444 + L2 LINE L2 3178 3271 -1 1989 160 3 3 chr2 87996953 87997259 -162690595 - AluJo SINE Alu -6 306 1 344 244 74 11 chr2 87999513 87999619 -162688235 - MER5A DNA MER1_type -18 160 49 418 266 124 11 chr2 88000266 88000443 -162687411 - MIR3 SINE MIR -5 203 7 506 300 89 11 chr2 88000668 88000848 -162687006 + MIR SINE MIR 69 262 0 576 274 71 0 chr2 88000896 88001064 -162686790 + L3 LINE CR1 1397 1576 -1 2402 89 3 10 chr2 88001583 88001896 -162685958 + AluSp SINE Alu 1 311 -2 266 230 30 70 chr2 88002163 88002263 -162685591 - MER117 DNA MER1_type -55 142 47 2432 83 3 0 chr2 88002738 88003038 -162684816 + AluSp SINE Alu 2 302 -11 191 239 0 22 chr2 88003586 88003632 -162684222 - L2 LINE L2 -2 3311 3267 182 264 56 14 chr2 88003725 88003797 -162684057 - L2 LINE L2 -213 3059 2985 2244 165 141 4 chr2 88004266 88004721 -162683133 - MLT1F1 LTR MaLR -50 517 1 2018 142 10 10 chr2 88004727 88005037 -162682817 + AluJo SINE Alu 3 312 0 400 254 59 22 chr2 88005145 88005292 -162682562 + MIR SINE MIR 33 180 -62 573 88 0 0 chr2 88005339 88005419 -162682435 + (TGG)n Simple_repeat Simple_repeat 1 80 0 2340 92 3 0 chr2 88005924 88006219 -162681635 + AluSp SINE Alu 1 296 -17 242 307 0 0 chr2 88007514 88007606 -162680248 + CT-rich Low_complexity Low_complexity 1 92 0 243 0 0 0 chr2 88007732 88007759 -162680095 + (GA)n Simple_repeat Simple_repeat 2 28 0 252 154 0 0 chr2 88007850 88007902 -162679952 + (TG)n Simple_repeat Simple_repeat 1 52 0 22 35 0 0 chr2 88010084 88010113 -162677741 + AT_rich Low_complexity Low_complexity 1 29 0 210 241 74 0 chr2 88010419 88010473 -162677381 + MIR3 SINE MIR 145 202 -6 2262 112 16 0 chr2 88011749 88012054 -162675800 + AluSx SINE Alu 1 310 -2 293 274 0 27 chr2 88012229 88012302 -162675552 + L2 LINE L2 3189 3259 -13 289 273 25 142 chr2 88013078 88013514 -162674340 - L2 LINE L2 -18 3254 2870 1017 149 117 59 chr2 88013664 88013886 -162673968 + MER46A DNA MER2_type 2 236 0 207 0 0 0 chr2 88016448 88016471 -162671383 + (A)n Simple_repeat Simple_repeat 1 23 0 181 293 86 0 chr2 88017807 88017865 -162669989 + MIR SINE MIR 88 150 -58 383 269 21 52 chr2 88018389 88018582 -162669272 + MIR SINE MIR 63 249 -13 22 35 0 0 chr2 88018612 88018641 -162669213 + AT_rich Low_complexity Low_complexity 1 29 0 196 246 82 16 chr2 88019416 88019477 -162668377 + MER5A DNA MER1_type 125 189 0 846 127 0 8 chr2 88019697 88019823 -162668031 + FRAM SINE Alu 35 159 -17 27 73 0 0 chr2 88021214 88021269 -162666585 + AT_rich Low_complexity Low_complexity 1 55 0 1417 140 9 0 chr2 88021468 88021682 -162666172 - AluJb SINE Alu -10 302 87 202 321 0 0 chr2 88022028 88022081 -162665773 - MIR3 SINE MIR -6 202 150 2257 122 0 0 chr2 88022888 88023191 -162664663 + AluSx SINE Alu 1 303 -9 1073 161 0 0 chr2 88023572 88023734 -162664120 - AluSx SINE Alu -14 296 135 507 130 0 0 chr2 88023734 88023803 -162664051 - AluSx SINE Alu -244 69 1 2164 81 53 0 chr2 88023843 88024126 -162663728 - AluSg SINE Alu -12 298 1 24 0 0 0 chr2 88024313 88024337 -162663517 + AT_rich Low_complexity Low_complexity 1 24 0 327 299 82 30 chr2 88024555 88024689 -162663165 + L2 LINE L2 3171 3311 -2 1163 118 0 53 chr2 88024987 88025174 -162662680 + AluSg/x SINE Alu 136 312 0 325 224 93 28 chr2 88025522 88025629 -162662225 - L1MB8 LINE L1 -2 6176 6063 221 304 170 70 chr2 88025694 88025924 -162661930 - L2 LINE L2 -101 3171 2919 462 145 0 0 chr2 88025930 88025999 -162661855 + Tigger2 DNA MER2_type 1 69 -2649 * 2109 116 97 81 chr2 88025997 88026260 -162661594 + Tigger2 DNA MER2_type 2280 2554 -164 1822 144 50 0 chr2 88026260 88026538 -162661316 - AluJb SINE Alu -20 292 1 2109 116 97 81 chr2 88026538 88026706 -162661148 + Tigger2 DNA MER2_type 2554 2718 0 204 293 207 9 chr2 88026898 88027014 -162660840 - MER5B DNA MER1_type -16 162 24 438 204 23 38 chr2 88027071 88027203 -162660651 + L1MB8 LINE L1 6049 6178 0 2251 110 3 0 chr2 88027211 88027512 -162660342 + AluSp SINE Alu 1 302 -11 666 288 98 0 chr2 88027612 88027827 -162660027 + MIR SINE MIR 20 255 -7 1508 118 132 48 chr2 88027867 88028110 -162659744 - MER46B DNA MER2_type -2495 236 89 2416 75 0 19 chr2 88028110 88028417 -162659437 + AluY SINE Alu 1 301 -10 1508 118 132 48 chr2 88028417 88028462 -162659392 - MER46B DNA MER2_type -2642 89 49 1881 120 39 0 chr2 88028509 88028793 -162659061 + AluSx SINE Alu 1 295 -17 498 312 89 52 chr2 88029050 88029454 -162658400 + L3 LINE CR1 634 1052 -525 947 189 68 16 chr2 88029707 88029955 -162657899 - Charlie2 DNA MER1_type 0 2862 2602 891 261 184 30 chr2 88030089 88030529 -162657325 + L1ME2 LINE L1 5293 5842 -322 2162 84 45 0 chr2 88030529 88030815 -162657039 + AluSp SINE Alu 1 299 -14 891 261 184 30 chr2 88030815 88030944 -162656910 + L1ME2 LINE L1 5842 5950 -214 379 220 120 40 chr2 88031195 88031345 -162656509 - Charlie2 DNA MER1_type -246 2616 2455 516 261 142 6 chr2 88031490 88031666 -162656188 - MIR SINE MIR -24 238 39 1982 60 112 4 chr2 88032220 88032487 -162655367 + AluSg SINE Alu 1 296 -14 1977 85 0 11 chr2 88032492 88032764 -162655090 + AluSc SINE Alu 2 270 -39 1744 150 27 20 chr2 88032917 88033211 -162654643 - AluJo SINE Alu -16 296 1 1262 169 118 65 chr2 88033251 88033425 -162654429 - AluJb SINE Alu -8 294 98 2274 51 3 41 chr2 88033425 88033719 -162654135 - AluY SINE Alu 0 311 29 1262 169 118 65 chr2 88033719 88033823 -162654031 - AluJb SINE Alu -204 98 1 2365 88 0 0 chr2 88033835 88034129 -162653725 - AluSx SINE Alu -18 294 1 200 364 173 0 chr2 88034378 88034540 -162653314 - L2 LINE L2 -2531 783 594 2419 71 0 3 chr2 88034896 88035191 -162652663 - AluSq SINE Alu -19 294 1 954 121 0 0 chr2 88035219 88035351 -162652503 - FLAM_C SINE Alu -1 132 1 189 303 0 53 chr2 88035454 88035530 -162652324 + MIR3 SINE MIR 4 75 -133 1702 204 41 78 chr2 88037116 88037631 -162650223 - MLT1E3 LTR MaLR 0 624 129 1962 152 0 10 chr2 88038070 88038373 -162649481 - AluJo SINE Alu -12 300 1 649 304 118 51 chr2 88038571 88039005 -162648849 + L2 LINE L2 2850 3312 -1 609 118 0 82 chr2 88039025 88039135 -162648719 - FLAM_C SINE Alu -8 135 35 815 172 107 132 chr2 88039210 88039262 -162648592 - MLT2C2 LTR ERVL -5 459 407 1653 184 3 7 chr2 88039262 88039545 -162648309 - AluJo SINE Alu -30 282 1 815 172 107 132 chr2 88039545 88039572 -162648282 - MLT2C2 LTR ERVL -57 407 381 2270 53 13 53 chr2 88039572 88039873 -162647981 - AluY SINE Alu -22 289 1 815 172 107 132 chr2 88039873 88040131 -162647723 - MLT2C2 LTR ERVL -83 381 75 1931 143 20 17 chr2 88040131 88040431 -162647423 - AluJb SINE Alu -11 301 1 815 172 107 132 chr2 88040431 88040505 -162647349 - MLT2C2 LTR ERVL -389 75 1 1886 121 0 4 chr2 88040529 88040786 -162647068 - AluSc SINE Alu -52 257 2 1909 95 0 0 chr2 88042013 88042256 -162645598 + AluSx SINE Alu 54 296 -16 621 214 64 68 chr2 88042503 88042769 -162645085 + L1M3 LINE L1 5068 5332 -814 1805 156 0 7 chr2 88042771 88043053 -162644801 + AluJb SINE Alu 3 282 -30 252 143 0 0 chr2 88043075 88043117 -162644737 + (TG)n Simple_repeat Simple_repeat 1 42 0 908 141 19 6 chr2 88043118 88043274 -162644580 + L1M3 LINE L1 5322 5479 -705 1296 99 6 0 chr2 88043277 88043448 -162644406 + AluSp SINE Alu 122 293 -20 680 110 0 0 chr2 88043450 88043541 -162644313 + L1M3 LINE L1 5485 5575 -605 3077 165 29 68 chr2 88043645 88043708 -162644146 + L1MB5 LINE L1 5534 5598 -576 2324 83 3 7 chr2 88043708 88044009 -162643845 - AluSp SINE Alu -13 300 1 3077 165 29 68 chr2 88044009 88044594 -162643260 + L1MB5 LINE L1 5598 6157 -17 285 191 53 63 chr2 88044688 88044801 -162643053 + L1MC5 LINE L1 6876 7060 -982 1170 260 85 26 chr2 88044879 88045309 -162642545 - MLT1G1 LTR MaLR -113 454 18 516 235 65 141 chr2 88045317 88045687 -162642167 - MLT1G1-int LTR MaLR -1 1370 1029 257 349 63 11 chr2 88045876 88046051 -162641803 - MLT1G1-int LTR MaLR -488 883 700 2119 82 64 0 chr2 88046450 88046731 -162641123 - AluY SINE Alu -12 299 1 225 209 0 0 chr2 88046839 88046882 -162640972 - MLT1G1-int LTR MaLR -1389 346 304 348 244 112 39 chr2 88046900 88047063 -162640791 - MLT1G1-int LTR MaLR -1225 146 2 290 197 22 6 chr2 88047064 88047150 -162640704 - MLT1G LTR MaLR 0 588 495 25 31 0 0 chr2 88047159 88047191 -162640663 + AT_rich Low_complexity Low_complexity 1 32 0 1500 154 7 40 chr2 88047191 88047463 -162640391 + AluJo SINE Alu 30 292 -20 534 266 226 46 chr2 88047496 88048018 -162639836 + L1MC4a LINE L1 5446 6061 -1747 24 32 0 0 chr2 88048033 88048064 -162639790 + AT_rich Low_complexity Low_complexity 1 31 0 859 152 0 0 chr2 88048196 88048328 -162639526 + FLAM_C SINE Alu 2 133 -10 1660 141 0 100 chr2 88048744 88049085 -162638769 - AluJb SINE Alu 0 312 6 26 30 0 0 chr2 88050034 88050067 -162637787 + AT_rich Low_complexity Low_complexity 1 33 0 2260 113 0 0 chr2 88050732 88051033 -162636821 - AluSx SINE Alu -11 301 1 2399 80 0 3 chr2 88051072 88051373 -162636481 + AluSx SINE Alu 1 300 -12 1282 199 25 32 chr2 88051533 88051810 -162636044 - AluJo SINE Alu -3 309 35 1821 187 3 42 chr2 88052279 88052546 -162635308 + MER2 DNA MER2_type 1 252 -92 2312 99 6 3 chr2 88052546 88052858 -162634996 - AluSq SINE Alu 0 313 1 1821 187 3 42 chr2 88052858 88052948 -162634906 + MER2 DNA MER2_type 252 344 0 2221 104 3 3 chr2 88052994 88053292 -162634562 - AluSg SINE Alu -12 298 1 2419 77 0 10 chr2 88053294 88053604 -162634250 - AluY SINE Alu -4 307 1 2327 92 10 3 chr2 88054014 88054317 -162633537 - AluSx SINE Alu -7 305 1 258 290 0 0 chr2 88055649 88055711 -162632143 - L2 LINE L2 0 3313 3252 216 154 0 39 chr2 88056229 88056281 -162631573 + (TA)n Simple_repeat Simple_repeat 2 51 0 645 273 88 63 chr2 88056545 88056956 -162630898 + L1MC4a LINE L1 5511 5931 -1877 2376 84 3 0 chr2 88058041 88058339 -162629515 - AluSp SINE Alu -14 299 1 585 294 191 39 chr2 88058546 88059006 -162628848 - L2 LINE L2 -1 3312 2760 1747 156 42 0 chr2 88059006 88059289 -162628565 + AluJo SINE Alu 1 295 -17 585 294 191 39 chr2 88059289 88059364 -162628490 - L2 LINE L2 -553 2760 2698 1950 148 0 13 chr2 88059368 88059678 -162628176 + AluJb SINE Alu 1 306 -6 23 33 0 0 chr2 88059769 88059799 -162628055 + AT_rich Low_complexity Low_complexity 1 30 0 1740 170 3 13 chr2 88061205 88061505 -162626349 - AluJb SINE Alu -15 297 1 29 78 0 0 chr2 88061514 88061578 -162626276 + AT_rich Low_complexity Low_complexity 1 64 0 792 199 0 0 chr2 88061737 88061868 -162625986 - FLAM_C SINE Alu -2 131 1 2230 100 3 0 chr2 88063007 88063296 -162624558 - AluSx SINE Alu -22 290 1 201 230 40 0 chr2 88063522 88063596 -162624258 + T-rich Low_complexity Low_complexity 5 81 0 2326 100 7 0 chr2 88063856 88064165 -162623689 + AluY SINE Alu 1 311 0 2373 73 0 7 chr2 88064167 88064468 -162623386 + AluY SINE Alu 3 301 -10 2374 81 7 0 chr2 88064525 88064820 -162623034 - AluSg SINE Alu -13 297 1 2229 104 3 0 chr2 88065289 88065588 -162622266 - AluSx SINE Alu -12 300 1 377 110 68 27 chr2 88065776 88065849 -162622005 - L1MD1 LINE L1 -9 6233 6158 2129 125 3 3 chr2 88066933 88067230 -162620624 - AluSx SINE Alu -15 297 1 2325 96 7 0 chr2 88067283 88067584 -162620270 + AluSp SINE Alu 3 305 -8 1953 121 53 0 chr2 88067665 88067946 -162619908 - AluSq SINE Alu -17 296 1 1524 160 31 27 chr2 88068000 88068293 -162619561 + Charlie4 DNA MER1_type 4 297 -1664 1585 169 66 0 chr2 88068308 88068580 -162619274 - AluJo SINE Alu -18 294 5 2308 87 0 0 chr2 88068786 88069073 -162618781 - AluSc SINE Alu -22 287 1 423 156 31 0 chr2 88069322 88069386 -162618468 + AluS SINE Alu 2 67 -244 27 0 0 0 chr2 88069524 88069551 -162618303 + AT_rich Low_complexity Low_complexity 1 27 0 2406 66 0 10 chr2 88069823 88070124 -162617730 + AluSc SINE Alu 1 298 -11 1970 121 7 21 chr2 88070177 88070467 -162617387 + AluSx SINE Alu 1 286 -26 976 156 19 0 chr2 88070521 88070681 -162617173 - AluJb SINE Alu -12 300 138 750 101 28 9 chr2 88071571 88071680 -162616174 + HY1 scRNA scRNA 2 112 0 803 128 8 0 chr2 88071747 88071864 -162615990 - AluJb SINE Alu -194 118 1 23 0 0 0 chr2 88072123 88072146 -162615708 + AT_rich Low_complexity Low_complexity 1 23 0 2027 134 10 0 chr2 88072252 88072544 -162615310 + AluJb SINE Alu 1 295 -17 769 121 271 0 chr2 88073673 88073813 -162614041 - AluSg/x SINE Alu -6 304 127 2295 118 0 6 chr2 88073819 88074133 -162613721 - AluSq SINE Alu -1 312 1 193 167 0 74 chr2 88074729 88074783 -162613071 + L2 LINE L2 3160 3209 -104 2396 88 0 7 chr2 88075022 88075327 -162612527 - AluSx SINE Alu -9 303 1 1130 200 33 5 chr2 88075355 88075565 -162612289 + MER20 DNA MER1_type 1 216 -3 21 36 0 0 chr2 88075644 88075672 -162612182 + AT_rich Low_complexity Low_complexity 1 28 0 628 250 54 12 chr2 88076047 88076215 -162611639 - MIR SINE MIR 0 262 88 2069 138 10 0 chr2 88076474 88076764 -162611090 + AluSx SINE Alu 1 293 -19 2362 87 7 0 chr2 88077166 88077464 -162610390 + AluSx SINE Alu 1 300 -12 1914 163 0 3 chr2 88077474 88077775 -162610079 + AluJb SINE Alu 2 301 -11 342 0 0 0 chr2 88078294 88078332 -162609522 + (TG)n Simple_repeat Simple_repeat 2 39 0 803 242 160 24 chr2 88078354 88078804 -162609050 - L1MC5 LINE L1 -45 7916 7406 229 179 0 0 chr2 88078815 88078854 -162609000 - U2 snRNA snRNA -149 39 1 1964 160 3 0 chr2 88078864 88079158 -162608696 - AluSx SINE Alu -17 295 1 2370 111 0 0 chr2 88079171 88079478 -162608376 - AluSx SINE Alu -5 307 1 2193 108 7 3 chr2 88080419 88080716 -162607138 + AluSx SINE Alu 1 298 -14 1034 293 130 37 chr2 88081104 88081705 -162606149 + L2 LINE L2 1941 2597 -717 2074 150 0 6 chr2 88081728 88082041 -162605813 - AluSx SINE Alu -1 311 1 325 101 0 0 chr2 88082061 88082108 -162605746 - Alu SINE Alu -257 42 1 317 292 231 29 chr2 88082110 88082478 -162605376 + L2 LINE L2 2639 3071 -201 377 253 19 95 chr2 88082624 88082782 -162605072 + L2 LINE L2 3168 3313 0 2351 91 0 13 chr2 88083003 88083310 -162604544 - AluY SINE Alu -8 303 1 308 349 101 0 chr2 88083313 88083442 -162604412 - MIR SINE MIR -76 186 45 204 311 101 34 chr2 88083526 88083645 -162604209 + MIR3 SINE MIR 3 129 -79 2040 147 0 0 chr2 88084576 88084868 -162602986 + AluSx SINE Alu 1 292 -20 2295 87 21 0 chr2 88084974 88085261 -162602593 + AluSc SINE Alu 1 293 -16 301 28 0 0 chr2 88085692 88085728 -162602126 - MADE1 DNA Mariner -17 63 28 188 362 48 0 chr2 88085962 88086067 -162601787 + L3b LINE CR1 1370 1479 -104 2342 110 0 0 chr2 88086114 88086424 -162601430 - AluSx SINE Alu -2 310 1 2395 78 3 0 chr2 88087737 88088031 -162599823 + AluSp SINE Alu 1 295 -18 278 256 37 0 chr2 88088259 88088341 -162599513 + MER112 DNA MER1_type 172 256 -4 2207 110 0 7 chr2 88089178 88089486 -162598368 - AluSg SINE Alu -4 306 1 829 136 64 0 chr2 88090715 88090840 -162597014 - FLAM_C SINE Alu 0 133 1 230 242 97 0 chr2 88091078 88091140 -162596714 + MER112 DNA MER1_type 17 84 -176 1495 176 35 7 chr2 88091822 88092111 -162595743 - AluJb SINE Alu -15 297 1 1682 160 22 0 chr2 88092143 88092418 -162595436 - AluJb SINE Alu -31 281 1 369 139 12 93 chr2 88095391 88095477 -162592377 + Tigger4(Zombi) DNA MER2_type 2653 2731 0 21 36 0 0 chr2 88099488 88099516 -162588338 + AT_rich Low_complexity Low_complexity 1 28 0 349 83 0 0 chr2 88099770 88099818 -162588036 - MADE1 DNA Mariner -1 79 32 505 78 0 0 chr2 88099822 88099886 -162587968 - MADE1 DNA Mariner -16 64 1 1754 105 112 11 chr2 88100121 88100388 -162587466 + AluSg SINE Alu 1 294 -16 27 0 0 0 chr2 88100774 88100801 -162587053 + AT_rich Low_complexity Low_complexity 1 27 0 2166 96 3 3 chr2 88101324 88101617 -162586237 - AluSg SINE Alu -17 293 1 1635 148 34 4 chr2 88101993 88102257 -162585597 - AluJo SINE Alu -28 284 13 613 215 184 0 chr2 88103027 88103190 -162584664 + MER3 DNA MER1_type 17 209 0 262 189 0 38 chr2 88103149 88103202 -162584652 - MER3 DNA MER1_type -121 88 38 * 722 226 7 0 chr2 88103340 88103477 -162584377 + AluJo SINE Alu 100 237 -75 2180 107 7 7 chr2 88104784 88105082 -162582772 - AluSq SINE Alu -15 298 1 2362 82 3 3 chr2 88105383 88105689 -162582165 - AluSx SINE Alu -6 306 1 237 308 39 26 chr2 88106242 88106320 -162581534 - L2 LINE L2 -49 3264 3186 902 160 34 34 chr2 88106337 88106512 -162581342 + MER20 DNA MER1_type 45 219 0 380 309 133 11 chr2 88106697 88106878 -162580976 - MIR SINE MIR -7 255 53 1577 140 0 0 chr2 88107073 88107294 -162580560 - AluSx SINE Alu -91 221 1 2284 99 0 10 chr2 88108355 88108658 -162579196 - AluY SINE Alu -10 301 2 1241 174 64 64 chr2 88108925 88109207 -162578647 + AluJo SINE Alu 1 282 -30 249 197 66 16 chr2 88109454 88109515 -162578339 - L1ME LINE L1 -347 5774 5711 2021 149 10 0 chr2 88110735 88111024 -162576830 - AluJo SINE Alu -20 292 1 2292 86 3 3 chr2 88111981 88112282 -162575572 + AluY SINE Alu 1 301 -10 425 267 61 38 chr2 88112967 88113098 -162574756 - L2 LINE L2 0 3272 3139 268 266 25 13 chr2 88113282 88113361 -162574493 + L2 LINE L2 3160 3239 -33 2261 109 0 0 chr2 88113562 88113866 -162573988 + AluSg SINE Alu 1 304 -6 1489 181 10 45 chr2 88113884 88114193 -162573661 + AluJo SINE Alu 9 306 -6 1143 224 9 13 chr2 88115151 88115383 -162572471 - AluJo SINE Alu -81 231 1 321 282 202 43 chr2 88116178 88116366 -162571488 - L2 LINE L2 -530 2784 2567 2543 168 34 19 chr2 88116394 88116870 -162570984 + MER68 LTR ERV1 3 485 -77 528 220 99 7 chr2 88116930 88117071 -162570783 - L2 LINE L2 -856 2458 2305 1760 65 4 22 chr2 88117131 88117363 -162570491 + AluY SINE Alu 83 310 -1 214 210 173 49 chr2 88117434 88117515 -162570339 + L2 LINE L2 3223 3313 0 23 0 0 0 chr2 88117800 88117823 -162570031 + AT_rich Low_complexity Low_complexity 1 23 0 1599 149 44 25 chr2 88117838 88118113 -162569741 - AluJb SINE Alu -32 280 1 558 279 64 43 chr2 88118438 88118671 -162569183 - MIR SINE MIR -13 249 12 30 21 0 21 chr2 88118916 88118932 -162568922 + AT_rich Low_complexity Low_complexity 1 16 -31 1643 142 16 57 chr2 88118932 88119250 -162568604 - AluSx SINE Alu -7 305 1 30 21 0 21 chr2 88119250 88119281 -162568573 + AT_rich Low_complexity Low_complexity 16 47 0 2258 89 0 6 chr2 88119281 88119594 -162568260 + AluY SINE Alu 1 311 0 2239 91 3 3 chr2 88119598 88119906 -162567948 + AluSp SINE Alu 6 313 0 576 234 0 0 chr2 88119914 88120025 -162567829 - FLAM_C SINE Alu -32 111 1 2398 58 0 0 chr2 88120036 88120330 -162567524 - AluY SINE Alu -17 294 1 189 376 8 43 chr2 88120916 88121033 -162566821 + MER5A DNA MER1_type 76 188 -1 336 300 100 18 chr2 88121774 88121944 -162565910 - L1MB8 LINE L1 -326 5852 5669 269 269 64 0 chr2 88121966 88122044 -162565810 - L1MB8 LINE L1 -2194 5614 5532 2403 41 0 7 chr2 88122217 88122512 -162565342 - AluY SINE Alu -17 294 2 21 57 0 0 chr2 88123198 88123233 -162564621 + AT_rich Low_complexity Low_complexity 1 35 0 1020 168 0 0 chr2 88123492 88123659 -162564195 - FRAM SINE Alu -11 165 1 219 286 235 42 chr2 88124989 88125108 -162562746 + L2 LINE L2 3172 3313 0 332 268 0 0 chr2 88126550 88126621 -162561233 - L2 LINE L2 -13 3259 3189 358 353 131 44 chr2 88126628 88126890 -162560964 + L2 LINE L2 2095 2333 -981 2455 47 0 3 chr2 88126890 88127189 -162560665 + AluSc SINE Alu 1 298 -11 358 353 131 44 chr2 88127189 88127736 -162560118 + L2 LINE L2 2333 2974 -340 527 265 18 12 chr2 88128129 88128295 -162559559 - L1ME2 LINE L1 -10 6154 5988 2051 194 18 20 chr2 88128343 88128787 -162559067 - L1ME1 LINE L1 -4 6162 5720 1506 189 14 92 chr2 88128899 88129186 -162558668 - MER58B DNA MER1_type -2079 341 33 1627 175 0 57 chr2 88129186 88129517 -162558337 + AluJb SINE Alu 1 312 0 1506 189 14 92 chr2 88129517 88129563 -162558291 - MER58B DNA MER1_type -2387 33 34 2543 167 45 2 chr2 88129563 88130005 -162557849 - LOR1b LTR ERV1 0 461 1 1506 189 14 92 chr2 88130005 88130029 -162557825 - MER58B DNA MER1_type -2385 35 11 456 306 109 38 chr2 88130088 88130441 -162557413 + L1M4c LINE L1 2171 2542 -3840 395 352 33 33 chr2 88130506 88130688 -162557166 + L1M4c LINE L1 2538 2719 -3663 232 364 17 6 chr2 88130707 88130880 -162556974 + L1M4c LINE L1 2887 3061 -3321 932 149 0 0 chr2 88130885 88131026 -162556828 + AluSp SINE Alu 1 141 -172 450 94 0 0 chr2 88131095 88131159 -162556695 + (TA)n Simple_repeat Simple_repeat 2 65 0 2226 146 6 3 chr2 88131196 88131532 -162556322 - MER1B DNA MER1_type 0 337 1 648 313 108 41 chr2 88131565 88132057 -162555797 + L1M4c LINE L1 3139 3663 -2719 360 115 19 0 chr2 88132070 88132122 -162555732 - MER31A LTR ERV1 -79 406 354 433 333 30 50 chr2 88132125 88132323 -162555531 + L1M4c LINE L1 3654 3847 -2535 29763 30 1 0 chr2 88132420 88136716 -162551138 - L1PA4 LINE L1 0 6155 1858 312 200 147 13 chr2 88137249 88137324 -162550530 - MIR SINE MIR -149 113 29 563 225 94 33 chr2 88137514 88137758 -162550096 + LTR16C LTR ERVL 224 482 -9 418 248 114 40 chr2 88137820 88137910 -162549944 - MER117 DNA MER1_type -31 166 84 228 67 0 0 chr2 88137910 88137940 -162549914 + (TA)n Simple_repeat Simple_repeat 2 31 0 1928 111 7 27 chr2 88137940 88138238 -162549616 - AluSq SINE Alu -21 292 1 418 248 114 40 chr2 88138238 88138295 -162549559 - MER117 DNA MER1_type -112 85 7 2340 178 53 17 chr2 88138912 88139406 -162548448 - L1MA8 LINE L1 0 6291 5775 2237 84 3 3 chr2 88139406 88139702 -162548152 + AluY SINE Alu 2 297 -14 2340 178 53 17 chr2 88139702 88139731 -162548123 - L1MA8 LINE L1 -516 5775 5749 2128 85 3 0 chr2 88140186 88140479 -162547375 - AluY SINE Alu -17 294 1 544 191 127 0 chr2 88140639 88140749 -162547105 - AluJb SINE Alu -69 243 120 191 264 56 14 chr2 88140881 88140953 -162546901 + MIR SINE MIR 117 191 -71 1590 98 4 13 chr2 88141127 88141352 -162546502 + AluSp SINE Alu 82 304 -9 2808 254 116 30 chr2 88141426 88142318 -162545536 - L2 LINE L2 0 3313 2499 2087 100 0 0 chr2 88142318 88142619 -162545235 + AluSx SINE Alu 1 301 0 2808 254 116 30 chr2 88142619 88142664 -162545190 - L2 LINE L2 -814 2499 2459 1548 160 50 3 chr2 88142664 88142946 -162544908 + AluJo SINE Alu 1 295 -17 2808 254 116 30 chr2 88142946 88143375 -162544479 - L2 LINE L2 -854 2459 1826 1593 196 0 7 chr2 88143477 88143783 -162544071 + AluJb SINE Alu 1 304 -8 1134 180 9 32 chr2 88143787 88144004 -162543850 + AluJb SINE Alu 85 296 -16 655 305 26 0 chr2 88144149 88144375 -162543479 - L2 LINE L2 -2240 1074 843 1296 77 0 0 chr2 88144381 88144551 -162543303 + AluY SINE Alu 136 305 -6 1033 239 91 44 chr2 88144568 88144808 -162543046 - L2 LINE L2 -2483 831 563 2314 70 7 0 chr2 88144808 88145106 -162542748 + AluSq SINE Alu 1 300 -13 1033 239 91 44 chr2 88145106 88145271 -162542583 - L2 LINE L2 -2751 563 407 361 180 0 0 chr2 88145271 88145332 -162542522 - FRAM/FAM SINE Alu -93 82 22 469 239 17 4 chr2 88145791 88146023 -162541831 + GA-rich Low_complexity Low_complexity 1 235 0 2301 97 0 0 chr2 88146655 88146964 -162540890 + AluSg SINE Alu 1 309 -1 1935 117 0 44 chr2 88147557 88147874 -162539980 - AluSx SINE Alu -9 303 1 13463 63 1 3 chr2 88148889 88150546 -162537308 - L1P LINE L1 -4489 1657 5 2038 119 0 10 chr2 88150738 88151040 -162536814 + AluSx SINE Alu 4 302 -10 198 103 0 0 chr2 88151164 88151193 -162536661 + (GAA)n Simple_repeat Simple_repeat 2 30 0 1566 157 14 24 chr2 88151198 88151492 -162536362 + AluJo SINE Alu 1 291 -21 230 180 40 0 chr2 88151492 88151542 -162536312 + GA-rich Low_complexity Low_complexity 1 52 0 299 310 106 50 chr2 88151543 88151607 -162536247 + L1M4 LINE L1 3663 3722 -2424 186 43 0 0 chr2 88151607 88151630 -162536224 + (TAA)n Simple_repeat Simple_repeat 2 24 0 299 310 106 50 chr2 88151630 88152073 -162535781 + L1M4 LINE L1 3722 4232 -1914 600 109 23 55 chr2 88152073 88152164 -162535690 + L1MB8 LINE L1 6055 6142 -36 8933 188 32 26 chr2 88152164 88153908 -162533946 + MER52A LTR ERV1 1 1755 0 600 109 23 55 chr2 88153908 88153944 -162533910 + L1MB8 LINE L1 6142 6178 0 299 310 106 50 chr2 88153944 88154216 -162533638 + L1M4 LINE L1 4232 4487 -1659 189 257 0 0 chr2 88154374 88154409 -162533445 + MIR SINE MIR 221 255 -7 2040 137 17 4 chr2 88154987 88155468 -162532386 - MER6 DNA MER2_type -48 817 1 337 249 98 61 chr2 88155551 88155781 -162532073 - MLT1J2 LTR MaLR 0 450 137 * 339 217 132 9 chr2 88155751 88155857 -162531997 - MLT1J1 LTR MaLR -322 124 6 229 136 23 0 chr2 88155987 88156031 -162531823 - Alu SINE Alu -1 299 255 999 101 0 0 chr2 88156034 88156173 -162531681 - AluSg SINE Alu -171 139 1 1766 137 3 40 chr2 88156209 88156509 -162531345 + AluJo SINE Alu 11 299 -13 339 269 13 0 chr2 88156509 88156587 -162531267 + MIR SINE MIR 78 156 -106 461 291 53 15 chr2 88157893 88158099 -162529755 + L1ME LINE L1 5449 5662 -459 472 293 5 86 chr2 88158195 88158393 -162529461 - MLT1K LTR MaLR -373 215 34 2159 118 0 3 chr2 88158419 88158725 -162529129 + AluSx SINE Alu 1 305 -7 377 321 43 7 chr2 88159089 88159229 -162528625 + MIR SINE MIR 68 212 -50 218 251 52 0 chr2 88159942 88160008 -162527846 + MIR SINE MIR 82 142 -66 2060 119 3 0 chr2 88160099 88160393 -162527461 - AluSq SINE Alu -14 299 5 244 264 42 0 chr2 88161453 88161525 -162526329 + CT-rich Low_complexity Low_complexity 4 78 0 254 214 0 57 chr2 88161538 88161608 -162526246 + MER103 DNA DNA 46 111 -55 209 320 57 52 chr2 88162375 88162569 -162525285 + L2 LINE L2 2985 3179 -93 860 256 135 0 chr2 88162660 88162875 -162524979 - MIR SINE MIR -17 245 2 330 241 38 0 chr2 88162963 88163042 -162524812 + MIR SINE MIR 86 167 -95 659 308 110 54 chr2 88164267 88164676 -162523178 + MLT1K LTR MaLR 96 527 -61 316 264 16 62 chr2 88165574 88165703 -162522151 + MLT1K LTR MaLR 126 248 -340 848 260 115 37 chr2 88165869 88166573 -162521281 - L1MEc LINE L1 -3241 2974 2216 1733 264 54 2 chr2 88166593 88167058 -162520796 - LTR16C LTR ERVL 0 491 3 543 312 87 18 chr2 88167265 88167595 -162520259 - L1MEc LINE L1 -861 1715 1387 2012 123 0 28 chr2 88167595 88167912 -162519942 - AluSx SINE Alu -4 308 1 543 312 87 18 chr2 88167912 88167972 -162519882 - L1MEc LINE L1 -1189 1387 1333 1212 241 107 42 chr2 88167974 88168362 -162519492 - MLT1J LTR MaLR -3 508 82 2730 151 16 0 chr2 88168362 88168787 -162519067 + MSTB1 LTR MaLR 1 432 0 1212 241 107 42 chr2 88168787 88168875 -162518979 - MLT1J LTR MaLR -429 82 1 621 191 38 32 chr2 88169483 88169640 -162518214 - L1ME LINE L1 -367 5803 5646 1923 291 18 14 chr2 88169640 88170201 -162517653 - MLT1G LTR MaLR 0 590 28 750 230 139 48 chr2 88170202 88170432 -162517422 - L1ME LINE L1 -520 5650 5400 721 207 47 7 chr2 88170438 88170588 -162517266 + MLT1C LTR MaLR 1 156 -349 2561 112 17 0 chr2 88170605 88170963 -162516891 + THE1B LTR MaLR 1 364 0 11042 107 38 1 chr2 88170963 88172481 -162515373 + THE1B-int LTR MaLR 1 1574 -6 2596 117 11 0 chr2 88172486 88172846 -162515008 + THE1B LTR MaLR 1 364 0 1067 261 26 10 chr2 88172876 88173182 -162514672 + MLT1C LTR MaLR 157 467 0 374 240 16 23 chr2 88173188 88173317 -162514537 - L1ME LINE L1 -775 5389 5262 25 0 0 0 chr2 88173331 88173356 -162514498 + AT_rich Low_complexity Low_complexity 1 25 0 500 291 128 31 chr2 88173367 88173641 -162514213 - LTR16A LTR ERVL -9 448 103 732 244 143 10 chr2 88173838 88174145 -162513709 - L1ME LINE L1 -913 5233 4886 3694 168 22 4 chr2 88174200 88174949 -162512905 - L1M4 LINE L1 -743 5403 4666 1196 153 22 45 chr2 88175064 88175287 -162512567 + MER20 DNA MER1_type 1 218 -1 2018 123 0 35 chr2 88176207 88176523 -162511331 - AluSx SINE Alu -7 305 1 493 134 0 5 chr2 88177124 88177256 -162510598 - MER53 DNA DNA -1 188 1 413 182 78 0 chr2 88177984 88178061 -162509793 + L1MC3 LINE L1 6696 6778 -1007 775 157 148 16 chr2 88178089 88178344 -162509510 - LTR64 LTR ERVK -8 550 220 1676 184 129 105 chr2 88178521 88178896 -162508958 - LTR49-int LTR ERV1 -1274 4964 4600 1897 136 30 7 chr2 88178896 88179197 -162508657 + AluSx SINE Alu 1 308 -4 1676 184 129 105 chr2 88179197 88179826 -162508028 - LTR49-int LTR ERV1 -1638 4600 2704 1298 152 74 35 chr2 88179834 88180117 -162507737 - LTR64 LTR ERVK -237 321 28 1333 133 19 51 chr2 88180117 88180373 -162507481 - AluJb SINE Alu -11 301 54 5108 149 37 42 chr2 88180434 88180529 -162507325 + L1MC3 LINE L1 6767 6861 -924 288 0 0 0 chr2 88180529 88180561 -162507293 + (CA)n Simple_repeat Simple_repeat 2 33 0 5108 149 37 42 chr2 88180561 88181132 -162506722 + L1MC3 LINE L1 6861 7433 -352 2157 120 3 0 chr2 88181132 88181441 -162506413 + AluSx SINE Alu 1 310 -2 5108 149 37 42 chr2 88181441 88181597 -162506257 + L1MC3 LINE L1 7433 7588 -197 1675 153 32 0 chr2 88181597 88181878 -162505976 + AluJb SINE Alu 1 290 -22 5108 149 37 42 chr2 88181878 88182077 -162505777 + L1MC3 LINE L1 7588 7785 0 260 246 246 0 chr2 88182111 88182229 -162505625 - L1ME4a LINE L1 -4 6117 5971 1887 180 9 23 chr2 88182512 88182766 -162505088 + MER2 DNA MER2_type 6 256 -89 1792 114 10 41 chr2 88182766 88183087 -162504767 - AluSc SINE Alu 0 312 1 1887 180 9 23 chr2 88183087 88183176 -162504678 + MER2 DNA MER2_type 256 345 0 645 269 23 0 chr2 88183223 88183394 -162504460 - L1ME4a LINE L1 -2181 5627 5453 249 324 99 7 chr2 88184386 88184528 -162503326 - L2 LINE L2 -10 3303 3149 1093 92 13 0 chr2 88184746 88184899 -162502955 - AluSx SINE Alu -3 307 153 789 205 45 60 chr2 88184899 88185099 -162502755 + pTR5 LTR ERV1 745 941 -1497 5030 98 19 0 chr2 88185229 88185904 -162501950 + LTR12 LTR ERV1 1 688 0 859 118 0 0 chr2 88185904 88186023 -162501831 - AluSx SINE Alu -152 160 42 295 278 13 106 chr2 88186023 88186174 -162501680 - MIR SINE MIR -62 200 64 370 333 162 9 chr2 88187420 88187630 -162500224 - MIR SINE MIR 0 262 21 300 287 35 128 chr2 88187698 88187843 -162500011 + L2 LINE L2 2840 2948 -324 1793 125 10 10 chr2 88187843 88188131 -162499723 - AluSp SINE Alu 0 313 26 300 287 35 128 chr2 88188131 88188267 -162499587 + L2 LINE L2 2948 3095 -177 204 67 0 0 chr2 88188934 88188964 -162498890 + (TG)n Simple_repeat Simple_repeat 1 30 0 349 242 43 19 chr2 88189018 88189179 -162498675 + (TG)n Simple_repeat Simple_repeat 2 166 0 2400 74 0 3 chr2 88189955 88190264 -162497590 - AluSc SINE Alu -1 308 1 2696 175 39 31 chr2 88190458 88191030 -162496824 - L1ME2 LINE L1 -2 6162 5587 2197 87 0 3 chr2 88191036 88191335 -162496519 + AluSc SINE Alu 1 298 -11 1730 160 0 26 chr2 88191384 88191691 -162496163 + AluJb SINE Alu 1 299 -13 855 198 18 7 chr2 88192199 88192398 -162495456 - LTR25 LTR ERV1 0 792 364 386 241 9 46 chr2 88192597 88192705 -162495149 - LTR25 LTR ERV1 -461 333 230 857 257 53 53 chr2 88193353 88193497 -162494357 + MLT1J LTR MaLR 25 171 -340 2016 131 0 10 chr2 88193497 88193795 -162494059 + AluSx SINE Alu 1 295 -17 857 257 53 53 chr2 88193795 88193934 -162493920 + MLT1J LTR MaLR 170 308 -203 777 147 30 96 chr2 88194216 88194360 -162493494 + L1MB7 LINE L1 5992 6121 -63 1636 177 0 14 chr2 88194360 88194654 -162493200 + AluJb SINE Alu 1 290 -22 777 147 30 96 chr2 88194654 88194706 -162493148 + L1MB7 LINE L1 6121 6175 -9 1963 97 0 88 chr2 88194753 88195083 -162492771 - AluSx SINE Alu -11 301 1 419 315 17 13 chr2 88195092 88195251 -162492603 - MIR SINE MIR -61 147 11 542 328 39 17 chr2 88195615 88195847 -162492007 - MIR SINE MIR -6 256 20 270 0 0 0 chr2 88196526 88196556 -162491298 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 1855 107 0 8 chr2 88196564 88196817 -162491037 - AluSq SINE Alu -31 282 32 339 172 35 0 chr2 88196917 88196975 -162490879 + THE1C LTR MaLR 316 375 0 3813 176 44 8 chr2 88196975 88197963 -162489891 + L1MB8 LINE L1 4972 6002 -176 606 304 42 48 chr2 88198278 88198636 -162489218 - MLT1K LTR MaLR -50 538 183 623 175 38 38 chr2 88198665 88198825 -162489029 - Charlie1 DNA MER1_type 0 2761 2602 22 56 0 0 chr2 88198825 88198861 -162488993 + AT_rich Low_complexity Low_complexity 1 36 0 1803 138 10 3 chr2 88198875 88199165 -162488689 + AluJo SINE Alu 12 303 -9 3003 133 111 10 chr2 88199661 88200040 -162487814 + MER41C LTR ERV1 1 445 -109 1715 100 20 0 chr2 88200040 88200290 -162487564 - AluSx SINE Alu -57 255 1 3003 133 111 10 chr2 88200290 88200413 -162487441 + MER41C LTR ERV1 445 554 0 32 0 0 0 chr2 88201198 88201230 -162486624 + GC_rich Low_complexity Low_complexity 1 32 0 24 85 0 0 chr2 88201346 88201405 -162486449 + GC_rich Low_complexity Low_complexity 1 59 0 671 254 28 6 chr2 88203767 88203944 -162483910 - L1ME3A LINE L1 -8 6162 5982 1155 162 4 31 chr2 88203944 88204172 -162483682 - AluJo SINE Alu -90 222 1 753 290 42 0 chr2 88204177 88204436 -162483418 - L1ME3A LINE L1 -277 5893 5624 2392 53 17 0 chr2 88204471 88204772 -162483082 - AluY SINE Alu -5 306 1 464 213 66 66 chr2 88205793 88206004 -162481850 - Charlie5 DNA MER1_type -27 2585 2375 601 242 146 0 chr2 88206095 88206260 -162481594 - MIR SINE MIR -43 219 31 187 283 33 54 chr2 88206413 88206505 -162481349 + L2 LINE L2 2593 2682 -632 2630 80 6 25 chr2 88206817 88207179 -162480675 - THE1A LTR MaLR 0 355 1 11550 84 33 3 chr2 88207179 88207469 -162480385 - THE1A-int LTR MaLR 0 1580 1300 2136 90 13 20 chr2 88207469 88207768 -162480086 - AluSx SINE Alu -15 297 1 11550 84 33 3 chr2 88207768 88209012 -162478842 - THE1A-int LTR MaLR -280 1300 1 2557 81 14 25 chr2 88209012 88209371 -162478483 - THE1A LTR MaLR 0 355 1 2049 120 0 3 chr2 88209479 88209778 -162478076 - AluSx SINE Alu -14 298 1 183 200 107 67 chr2 88209786 88209861 -162477993 - L3 LINE CR1 -1383 194 117 420 312 67 67 chr2 88211344 88211687 -162476167 + L2 LINE L2 2926 3268 -4 740 203 7 0 chr2 88211725 88211863 -162475991 + MER105 DNA DNA 1 139 -65 361 260 24 16 chr2 88211949 88212076 -162475778 + L1ME4a LINE L1 5948 6075 -46 2554 302 96 8 chr2 88212593 88213362 -162474492 + L1MC4 LINE L1 7204 8040 -2 2114 101 23 3 chr2 88213541 88213847 -162474007 + AluSx SINE Alu 1 312 0 248 349 32 8 chr2 88214760 88214886 -162472968 - MIR3 SINE MIR -7 201 73 180 0 0 0 chr2 88214916 88214936 -162472918 + (A)n Simple_repeat Simple_repeat 1 20 0 1710 157 7 10 chr2 88214944 88215238 -162472616 + AluJo SINE Alu 7 299 -13 671 271 167 28 chr2 88215527 88215844 -162472010 - L2 LINE L2 -1 3312 2952 244 294 112 42 chr2 88216352 88216495 -162471359 + MER5A DNA MER1_type 7 159 -30 242 236 0 0 chr2 88217133 88217188 -162470666 - LTR16A1 LTR ERVL -331 126 72 1956 74 4 8 chr2 88217698 88217955 -162469899 - AluSx SINE Alu -14 298 43 849 122 1 4 chr2 88218905 88219047 -162468807 + L1MA4 LINE L1 6047 6180 -120 1263 174 5 5 chr2 88219047 88219266 -162468588 + AluJb SINE Alu 87 305 -7 625 117 8 10 chr2 88219266 88219361 -162468493 + L1MA5 LINE L1 6178 6270 -30 1996 93 46 0 chr2 88219361 88219620 -162468234 + AluSq SINE Alu 28 298 -15 625 117 8 10 chr2 88219620 88219647 -162468207 + L1MA5 LINE L1 6270 6296 -4 219 264 98 78 chr2 88219712 88219905 -162467949 - L2 LINE L2 -1059 2255 2059 501 256 58 77 chr2 88219987 88220194 -162467660 - L2 LINE L2 0 3313 3111 1693 182 17 0 chr2 88220954 88221250 -162466604 + AluJo SINE Alu 1 301 -11 2527 74 0 0 chr2 88221380 88221677 -162466177 + AluSx SINE Alu 1 297 -15 1881 153 0 29 chr2 88221688 88221995 -162465859 + AluJb SINE Alu 1 298 -14 1779 149 132 66 chr2 88222370 88222794 -162465060 + LTR47A LTR ERVL 1 452 0 379 254 232 0 chr2 88222917 88223055 -162464799 - MER5A DNA MER1_type -1 188 19 630 169 127 0 chr2 88223157 88223275 -162464579 - AluJo SINE Alu -178 134 2 278 256 24 12 chr2 88223430 88223512 -162464342 - L2 LINE L2 -1 3312 3230 222 342 13 0 chr2 88224108 88224187 -162463667 - L2 LINE L2 -1001 2313 2234 1107 251 112 29 chr2 88225158 88225577 -162462277 - MLT1J LTR MaLR -57 454 1 558 242 49 62 chr2 88225742 88225986 -162461868 - L1MC5 LINE L1 -31 7930 7690 2154 177 52 18 chr2 88225986 88226293 -162461561 - L1MD1 LINE L1 -5 6237 5909 2300 107 0 0 chr2 88226293 88226592 -162461262 + AluSg SINE Alu 1 299 -11 2154 177 52 18 chr2 88226592 88226730 -162461124 - L1MD1 LINE L1 -333 5909 5777 198 0 0 0 chr2 88228456 88228478 -162459376 + (TG)n Simple_repeat Simple_repeat 2 23 0 225 94 0 0 chr2 88228621 88228653 -162459201 + (T)n Simple_repeat Simple_repeat 1 32 0 1455 141 157 0 chr2 88229453 88229708 -162458146 - AluJo SINE Alu -7 295 1 258 278 157 0 chr2 88229951 88230066 -162457788 - MIR SINE MIR -54 208 76 181 321 19 9 chr2 88230411 88230517 -162457337 + L2 LINE L2 2866 2972 -300 860 258 180 9 chr2 88230954 88231439 -162456415 + L2 LINE L2 2743 3313 0 4688 166 56 9 chr2 88231818 88232785 -162455069 + L1MB3 LINE L1 5174 6183 0 260 319 55 49 chr2 88233411 88233574 -162454280 + MIR SINE MIR 28 191 -71 1814 161 7 26 chr2 88233577 88233882 -162453972 + AluJb SINE Alu 1 299 -13 242 327 87 0 chr2 88234034 88234138 -162453716 - L2 LINE L2 0 3272 3160 1989 110 6 72 chr2 88235045 88235364 -162452490 - AluSx SINE Alu -14 298 1 583 281 61 55 chr2 88236051 88236361 -162451493 - L1MC4 LINE L1 -367 7675 7364 6747 170 52 23 chr2 88236381 88238390 -162449464 - L1MA5A LINE L1 0 6297 4214 2462 79 0 3 chr2 88238390 88238695 -162449159 + AluY SINE Alu 1 304 -7 6747 170 52 23 chr2 88238695 88238781 -162449073 - L1MA5A LINE L1 -2083 4214 4132 371 233 237 4 chr2 88238892 88239124 -162448730 - L1 LINE L1 -1786 4360 4075 1637 183 102 19 chr2 88239647 88240158 -162447696 + L1MC4 LINE L1 6452 7085 -941 1626 239 107 57 chr2 88240160 88240585 -162447269 + L1MC4 LINE L1 7232 7701 -341 1811 164 3 7 chr2 88240585 88240872 -162446982 - AluSx SINE Alu -26 286 1 1626 239 107 57 chr2 88240872 88241082 -162446772 + L1MC4 LINE L1 7701 7899 -143 1089 280 75 5 chr2 88241159 88241570 -162446284 - L1 LINE L1 -2078 4068 3629 2225 131 0 0 chr2 88241577 88241875 -162445979 - AluSx SINE Alu -14 298 1 2169 104 0 7 chr2 88242270 88242586 -162445268 - AluSx SINE Alu 0 314 1 283 290 11 0 chr2 88242711 88242804 -162445050 - L1 LINE L1 -2727 3419 3326 742 180 0 43 chr2 88242998 88243137 -162444717 + AluJo SINE Alu 2 134 -178 320 283 51 29 chr2 88243154 88243292 -162444562 - L1MEd LINE L1 -5448 671 531 881 148 23 51 chr2 88243440 88243616 -162444238 - FAM SINE Alu -4 171 1 1871 135 30 7 chr2 88244009 88244306 -162443548 - AluSx SINE Alu -8 304 1 440 207 63 0 chr2 88245024 88245135 -162442719 - MER5B DNA MER1_type -59 119 2 287 294 92 25 chr2 88245229 88245392 -162442462 - MIR SINE MIR -3 259 86 191 370 0 0 chr2 88246446 88246527 -162441327 + MIR SINE MIR 179 259 -3 2207 124 0 0 chr2 88246575 88246874 -162440980 + AluSx SINE Alu 1 299 -13 271 244 11 44 chr2 88247088 88247178 -162440676 - MER103 DNA DNA -44 122 36 1113 204 30 11 chr2 88247182 88247456 -162440398 - L1MD3 LINE L1 -14 7981 7610 2207 77 0 83 chr2 88248032 88248358 -162439496 + AluSq SINE Alu 1 299 -14 282 229 43 0 chr2 88249045 88249115 -162438739 + L1ME4a LINE L1 5589 5661 -460 2365 92 0 0 chr2 88249157 88249452 -162438402 + AluY SINE Alu 1 295 -16 969 92 8 0 chr2 88249627 88249758 -162438096 + AluSg/x SINE Alu 177 308 -4 194 324 135 0 chr2 88249821 88249895 -162437959 - L2 LINE L2 -20 3252 3169 884 145 0 0 chr2 88249968 88250126 -162437728 - AluSg/x SINE Alu 0 313 156 1838 108 19 0 chr2 88250138 88250396 -162437458 - AluSx SINE Alu -16 296 34 715 298 96 10 chr2 88250662 88251085 -162436769 + L1ME4a LINE L1 5659 6118 -3 22 56 0 0 chr2 88252033 88252069 -162435785 + AT_rich Low_complexity Low_complexity 1 36 0 1789 164 0 17 chr2 88252282 88252580 -162435274 + AluJb SINE Alu 1 293 -19 2113 143 0 0 chr2 88253004 88253304 -162434550 - AluSx SINE Alu -12 300 1 206 233 14 41 chr2 88254112 88254185 -162433669 - L2 LINE L2 -9 3263 3193 1946 148 3 7 chr2 88254556 88254860 -162432994 + AluJb SINE Alu 1 303 -9 197 139 23 23 chr2 88255012 88255055 -162432799 - L2 LINE L2 -40 3273 3231 426 85 0 0 chr2 88256559 88256618 -162431236 + (TG)n Simple_repeat Simple_repeat 1 59 0 199 273 62 39 chr2 88257932 88258060 -162429794 - L2 LINE L2 -56 3257 3127 349 273 50 0 chr2 88258158 88258279 -162429575 + MER103 DNA DNA 40 166 0 442 209 101 0 chr2 88258358 88258487 -162429367 + MER117 DNA MER1_type 17 158 -39 2453 75 3 0 chr2 88258610 88258905 -162428949 + AluSp SINE Alu 1 296 -17 582 229 84 0 chr2 88259585 88259751 -162428103 + MER5A DNA MER1_type 9 188 -1 310 317 32 0 chr2 88259792 88259915 -162427939 + MER117 DNA MER1_type 12 138 -59 802 214 88 22 chr2 88260994 88261176 -162426678 - MER58A DNA MER1_type -27 197 4 1839 152 47 0 chr2 88261190 88261487 -162426367 - AluJb SINE Alu -1 311 1 285 208 69 40 chr2 88262751 88262852 -162425002 + L1ME4a LINE L1 5991 6094 -27 882 215 6 0 chr2 88262957 88263115 -162424739 + AluJb SINE Alu 131 289 -23 318 50 0 0 chr2 88263156 88263196 -162424658 + (CA)n Simple_repeat Simple_repeat 2 41 0 322 286 137 25 chr2 88263322 88263483 -162424371 - L1PA8A LINE L1 -303 5828 5651 341 287 114 12 chr2 88265240 88265407 -162422447 - MIR SINE MIR -12 250 67 361 290 174 13 chr2 88268215 88268525 -162419329 + L2 LINE L2 2952 3311 -2 1915 110 13 75 chr2 88269343 88269661 -162418193 + AluSx SINE Alu 1 298 -14 299 300 0 0 chr2 88269790 88269880 -162417974 - MIR SINE MIR -48 214 125 991 206 82 17 chr2 88270346 88270637 -162417217 + L1M4 LINE L1 2757 3066 -3080 3332 214 47 42 chr2 88270697 88271052 -162416802 - L1M4 LINE L1 -2299 3847 3495 2519 93 3 0 chr2 88271052 88271364 -162416490 - AluSp SINE Alu 0 313 1 3332 214 47 42 chr2 88271364 88272090 -162415764 - L1M4 LINE L1 -2651 3495 2761 2006 245 116 53 chr2 88272455 88272994 -162414860 - L1ME3A LINE L1 -45 6125 5621 1877 135 0 0 chr2 88272994 88273253 -162414601 - AluSx SINE Alu -53 259 1 2006 245 116 53 chr2 88273253 88274421 -162413433 - L1ME3A LINE L1 -549 5621 4266 2100 160 0 0 chr2 88274552 88274859 -162412995 + AluSx SINE Alu 1 307 -5 498 308 5 29 chr2 88275210 88275418 -162412436 - L1MC4a LINE L1 -1929 5879 5677 207 0 0 0 chr2 88275441 88275464 -162412390 + (TTA)n Simple_repeat Simple_repeat 2 24 0 727 153 0 0 chr2 88275464 88275582 -162412272 - AluJb SINE Alu -193 119 2 251 212 16 10 chr2 88275583 88275662 -162412192 - L1MC4a LINE L1 -460 5661 5585 1060 157 124 46 chr2 88275924 88276019 -162411835 + AluJo SINE Alu 49 135 -177 2252 108 0 0 chr2 88276019 88276305 -162411549 + AluSg SINE Alu 1 286 -24 299 25 25 0 chr2 88276306 88276346 -162411508 + (AGTAG)n Simple_repeat Simple_repeat 1 41 0 1060 157 124 46 chr2 88276346 88276465 -162411389 + AluJo SINE Alu 134 282 -30 2672 189 48 25 chr2 88276482 88277134 -162410720 - L1MB7 LINE L1 -50 6134 5468 5074 95 40 9 chr2 88277137 88277930 -162409924 - Tigger1 DNA MER2_type -679 1739 922 2423 102 0 0 chr2 88277944 88278248 -162409606 - AluSx SINE Alu -8 304 1 1911 209 35 11 chr2 88278254 88278718 -162409136 - L1MB7 LINE L1 -1771 4375 3901 2159 118 0 3 chr2 88279112 88279399 -162408455 - AluSc SINE Alu -19 290 5 30 0 0 0 chr2 88281219 88281249 -162406605 + AT_rich Low_complexity Low_complexity 1 30 0 2114 108 0 0 chr2 88282173 88282442 -162405412 + AluSx SINE Alu 1 269 -43 403 305 99 36 chr2 88282994 88283440 -162404414 - L1ME4a LINE L1 -1 6120 5647 2367 95 0 3 chr2 88284201 88284505 -162403349 + AluSc SINE Alu 1 303 -6 417 240 178 0 chr2 88284856 88284985 -162402869 + MIR SINE MIR 1 152 -110 485 295 36 0 chr2 88285886 88286079 -162401775 + MIR SINE MIR 27 226 -36 2155 109 48 0 chr2 88287557 88287851 -162400003 - AluSc SINE Alu -1 308 1 215 30 0 30 chr2 88288107 88288140 -162399714 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 686 183 0 0 chr2 88288152 88288267 -162399587 - FLAM_C SINE Alu -18 115 1 405 315 112 10 chr2 88290695 88290892 -162396962 - MIR SINE MIR 0 262 46 242 282 179 0 chr2 88290964 88291042 -162396812 - MIR SINE MIR -56 152 61 246 32 0 0 chr2 88291382 88291413 -162396441 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 413 301 46 0 chr2 88291958 88292131 -162395723 - LTR33 LTR ERVL -301 220 40 420 258 40 0 chr2 88292158 88292282 -162395572 - MER94 DNA DNA -4 130 2 218 331 99 0 chr2 88293018 88293160 -162394694 + MIR3 SINE MIR 31 186 -22 222 62 0 0 chr2 88293193 88293225 -162394629 + (CA)n Simple_repeat Simple_repeat 2 33 0 564 96 0 58 chr2 88293303 88293459 -162394395 + (CA)n Simple_repeat Simple_repeat 2 148 0 216 308 56 49 chr2 88294623 88294766 -162393088 + MIR SINE MIR 12 155 -53 279 310 17 35 chr2 88296836 88296952 -162390902 - Charlie8 DNA MER1_type -2287 130 17 290 282 35 0 chr2 88298059 88298144 -162389710 + CT-rich Low_complexity Low_complexity 2 89 0 320 281 52 39 chr2 88298777 88298930 -162388924 - L2 LINE L2 -193 3079 2925 2140 115 7 0 chr2 88299438 88299716 -162388138 + AluSx SINE Alu 3 282 -30 280 239 43 0 chr2 88299825 88299917 -162387937 + L2 LINE L2 3193 3288 -25 246 105 0 0 chr2 88302130 88302168 -162385686 + (TGGA)n Simple_repeat Simple_repeat 4 41 0 227 250 0 0 chr2 88302986 88303042 -162384812 + GA-rich Low_complexity Low_complexity 2 57 0 2406 81 0 13 chr2 88304706 88305014 -162382840 + AluY SINE Alu 1 304 -7 2268 92 7 3 chr2 88309458 88309750 -162378104 - AluSq SINE Alu -20 293 1 668 165 47 0 chr2 88309866 88309993 -162377861 - FLAM_C SINE Alu 0 133 1 3009 157 69 9 chr2 88310209 88310558 -162377296 - L1MB3 LINE L1 -153 6030 5633 2343 90 13 0 chr2 88310558 88310857 -162376997 + AluSx SINE Alu 1 303 -9 3009 157 69 9 chr2 88310857 88311075 -162376779 - L1MB3 LINE L1 -550 5633 5429 216 211 70 18 chr2 88311502 88311559 -162376295 + MER5B DNA MER1_type 2 61 -117 929 110 39 0 chr2 88311588 88311715 -162376139 + AluSg/x SINE Alu 163 294 -16 1767 171 32 4 chr2 88311725 88312006 -162375848 + AluJo SINE Alu 1 289 -23 395 234 131 0 chr2 88312007 88312114 -162375740 - MER5B DNA MER1_type -55 123 3 185 216 0 59 chr2 88313645 88313696 -162374158 + MIR SINE MIR 114 161 -101 1097 137 73 5 chr2 88313735 88313939 -162373915 + MER20 DNA MER1_type 2 219 0 510 251 61 36 chr2 88313991 88314031 -162373823 - L1MB3 LINE L1 -749 5397 5359 1927 147 23 7 chr2 88314031 88314331 -162373523 - AluJb SINE Alu -7 305 1 510 251 61 36 chr2 88314331 88314548 -162373306 - L1MB3 LINE L1 -787 5359 5215 507 103 0 0 chr2 88314666 88314778 -162373076 - AluSg/x SINE Alu 0 325 214 2176 130 0 3 chr2 88314811 88315104 -162372750 + AluSx SINE Alu 1 292 -20 398 302 104 52 chr2 88315299 88315510 -162372344 - MIR SINE MIR -24 238 4 184 301 82 0 chr2 88315909 88315982 -162371872 - MIR SINE MIR -64 198 120 307 221 15 0 chr2 88316811 88316879 -162370975 + MER5A DNA MER1_type 1 69 -120 2140 114 3 26 chr2 88316879 88317186 -162370668 + AluSx SINE Alu 1 300 -12 437 261 46 0 chr2 88317214 88317344 -162370510 + MER5A DNA MER1_type 50 185 -4 251 287 23 58 chr2 88317571 88317658 -162370196 - MIR SINE MIR -55 207 124 2290 106 3 0 chr2 88317940 88318241 -162369613 + AluSg SINE Alu 2 303 -7 2920 153 18 18 chr2 88318249 88318812 -162369042 + L1MB3 LINE L1 5620 6182 -1 339 285 140 42 chr2 88318973 88319166 -162368688 + MIR SINE MIR 48 259 -3 245 312 28 46 chr2 88319167 88319276 -162368578 + L2 LINE L2 2942 3048 -224 639 265 94 0 chr2 88319389 88319570 -162368284 + MLT1I LTR MaLR 198 395 -14 391 223 21 0 chr2 88319576 88319670 -162368184 + MER5A DNA MER1_type 9 104 -85 357 248 47 27 chr2 88319772 88319921 -162367933 + MLT1J LTR MaLR 5 156 -355 358 180 9 51 chr2 88320092 88320203 -162367651 + MLT1H LTR MaLR 40 173 -376 237 354 34 28 chr2 88320518 88320696 -162367158 + L2 LINE L2 2763 2941 -373 996 208 82 54 chr2 88320719 88320925 -162366929 - MLT1B LTR MaLR 0 452 253 208 102 41 0 chr2 88320925 88320974 -162366880 + GA-rich Low_complexity Low_complexity 1 51 0 996 208 82 54 chr2 88320974 88321164 -162366690 - MLT1B LTR MaLR -199 253 5 1426 167 4 4 chr2 88321670 88321927 -162365927 + L1MB3 LINE L1 5926 6182 -1 2126 116 3 7 chr2 88323512 88323805 -162364049 - AluY SINE Alu -19 292 1 33 25 0 0 chr2 88324497 88324537 -162363317 + AT_rich Low_complexity Low_complexity 1 40 0 2431 87 3 0 chr2 88324578 88324877 -162362977 - AluSc SINE Alu -9 300 1 2091 87 3 68 chr2 88324879 88325200 -162362654 - AluSc SINE Alu -9 300 1 497 331 122 16 chr2 88325295 88325606 -162362248 + L2 LINE L2 2432 2775 -539 1966 152 0 26 chr2 88325661 88325964 -162361890 + AluJo SINE Alu 1 295 -17 5870 130 9 33 chr2 88326007 88326518 -162361336 - L1MA8 LINE L1 0 6291 5770 1977 157 7 0 chr2 88326518 88326817 -162361037 - AluJb SINE Alu -9 303 3 5870 130 9 33 chr2 88326817 88328235 -162359619 - L1MA8 LINE L1 -521 5770 4410 1359 230 132 0 chr2 88328262 88328619 -162359235 - MLT1E1 LTR MaLR 0 654 251 602 131 0 0 chr2 88328620 88328788 -162359066 - L1MB3 LINE L1 -7 6176 5881 2252 114 7 0 chr2 88328855 88329152 -162358702 + AluSq SINE Alu 1 299 -14 1203 175 9 0 chr2 88329152 88329369 -162358485 - MLT1E1 LTR MaLR -435 219 1 302 325 80 40 chr2 88329369 88329588 -162358266 + L2 LINE L2 2790 3024 -248 959 89 0 0 chr2 88329652 88329776 -162358078 - AluSg/x SINE Alu -13 297 174 535 270 20 39 chr2 88329781 88329985 -162357869 + L2 LINE L2 3112 3311 -2 862 254 47 21 chr2 88330248 88330527 -162357327 - MLT1J LTR MaLR -190 321 36 2098 109 11 0 chr2 88330757 88331042 -162356812 - AluSx SINE Alu -24 288 1 446 275 22 14 chr2 88332199 88332337 -162355517 - MLT1I LTR MaLR -270 139 1 228 364 63 28 chr2 88332387 88332530 -162355324 - L3 LINE CR1 -1135 442 295 237 347 20 10 chr2 88332561 88332659 -162355195 - L3 LINE CR1 -1265 312 214 294 29 0 0 chr2 88332817 88332852 -162355002 + (TG)n Simple_repeat Simple_repeat 2 36 0 1138 244 49 102 chr2 88334219 88334428 -162353426 - LTR33 LTR ERVL 0 521 302 2051 116 14 0 chr2 88334428 88334704 -162353150 + AluSx SINE Alu 33 312 0 1138 244 49 102 chr2 88334704 88335042 -162352812 - LTR33 LTR ERVL -219 302 3 377 316 147 26 chr2 88336560 88336750 -162351104 - MIR SINE MIR -29 233 21 374 181 21 146 chr2 88337106 88337250 -162350604 + MIR3 SINE MIR 78 203 -5 880 238 71 8 chr2 88338622 88338874 -162348980 + LTR16A LTR ERVL 170 437 -13 262 132 0 0 chr2 88339110 88339148 -162348706 + MIR SINE MIR 106 143 -65 186 314 139 0 chr2 88339452 88339538 -162348316 - MIR SINE MIR -118 144 47 595 255 80 30 chr2 88339780 88339980 -162347874 - MER63A DNA MER1_type 0 210 1 1085 114 0 0 chr2 88340007 88340147 -162347707 + AluJb SINE Alu 160 299 -13 2047 137 3 0 chr2 88340584 88340876 -162346978 - AluSx SINE Alu -19 293 1 2098 82 0 21 chr2 88340886 88341168 -162346686 - AluSc SINE Alu 0 309 34 212 229 21 0 chr2 88341226 88341274 -162346580 + (TA)n Simple_repeat Simple_repeat 1 49 0 542 180 0 8 chr2 88341277 88341399 -162346455 - L1MA5A LINE L1 -1 6296 6176 2404 100 0 0 chr2 88341997 88342296 -162345558 - AluSq SINE Alu -14 299 1 2361 113 0 6 chr2 88342550 88342861 -162344993 + AluSx SINE Alu 1 309 -3 2168 120 13 0 chr2 88343627 88343926 -162343928 - AluSx SINE Alu -1 311 9 640 217 133 53 chr2 88344131 88344265 -162343589 - MER45C DNA AcHobo -709 244 83 2085 133 3 0 chr2 88344265 88344558 -162343296 + AluSq SINE Alu 1 294 -19 640 217 133 53 chr2 88344558 88344649 -162343205 - MER45C DNA AcHobo -870 83 1 1800 179 0 0 chr2 88344945 88345236 -162342618 + AluJo SINE Alu 2 292 -20 1609 264 52 15 chr2 88345361 88345838 -162342016 + MER45C DNA AcHobo 459 953 0 2376 91 3 0 chr2 88346326 88346634 -162341220 + AluY SINE Alu 1 309 -2 226 313 0 15 chr2 88346879 88346946 -162340908 - L2 LINE L2 0 3313 3248 2242 132 0 3 chr2 88347048 88347359 -162340495 - AluSq SINE Alu -3 310 1 661 304 107 13 chr2 88347460 88347684 -162340170 - MIR SINE MIR -13 249 5 245 122 49 0 chr2 88348102 88348143 -162339711 - MIR3 SINE MIR -15 193 151 430 307 40 7 chr2 88348270 88348420 -162339434 - MIR3 SINE MIR -38 170 16 1105 261 135 36 chr2 88348748 88349188 -162338666 - LTR33 LTR ERVL -7 514 24 2332 159 7 39 chr2 88349188 88349597 -162338257 + MSTD LTR MaLR 1 396 0 1105 261 135 36 chr2 88349597 88349624 -162338230 - LTR33 LTR ERVL -497 24 1 1495 221 65 118 chr2 88350015 88350080 -162337774 - MER21B LTR ERV1 -149 714 647 2579 70 0 0 chr2 88350080 88350381 -162337473 + AluY SINE Alu 1 301 -10 1495 221 65 118 chr2 88350381 88350745 -162337109 - MER21B LTR ERV1 -216 647 338 2525 96 0 0 chr2 88350745 88351057 -162336797 - AluSx SINE Alu 0 312 1 1495 221 65 118 chr2 88351057 88351374 -162336480 - MER21B LTR ERV1 -525 338 6 873 57 16 0 chr2 88351730 88351852 -162336002 + MER4C LTR ERV1 3 126 -339 510 155 62 21 chr2 88351866 88351963 -162335891 + FLAM_A SINE Alu 23 123 -19 2524 70 0 0 chr2 88351963 88352263 -162335591 + AluY SINE Alu 1 300 -11 329 130 14 72 chr2 88352493 88352562 -162335292 - MER45 DNA AcHobo -7 1574 1510 928 187 58 0 chr2 88352563 88352718 -162335136 + FAM SINE Alu 1 164 -11 353 204 129 0 chr2 88352876 88352969 -162334885 + MLT1I LTR MaLR 303 407 -2 2394 94 0 0 chr2 88353144 88353451 -162334403 - AluY SINE Alu -4 307 1 2218 98 40 0 chr2 88353596 88353914 -162333940 - AluSq SINE Alu 0 313 1 1766 172 14 3 chr2 88353923 88354214 -162333640 - AluJb SINE Alu -18 294 1 1570 176 99 8 chr2 88354514 88354867 -162332987 + L1MC2 LINE L1 5960 6344 0 474 195 252 57 chr2 88355073 88355232 -162332622 + MER91B DNA MER1_type 1 190 0 318 291 84 50 chr2 88355952 88356094 -162331760 + HAL1 LINE L1 129 280 -2227 1994 127 19 29 chr2 88356094 88356410 -162331444 + AluSq SINE Alu 1 313 0 318 291 84 50 chr2 88356410 88356446 -162331408 + HAL1 LINE L1 280 313 -2194 692 287 46 27 chr2 88356589 88356917 -162330937 + HAL1 LINE L1 373 706 -1801 2312 96 0 0 chr2 88357085 88357376 -162330478 + AluSx SINE Alu 1 291 -21 812 117 5 48 chr2 88357377 88357565 -162330289 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 504 48 0 0 chr2 88357565 88357628 -162330226 + (GGGA)n Simple_repeat Simple_repeat 1 63 0 1845 178 36 7 chr2 88358630 88358815 -162329039 - AluJo SINE Alu 0 312 113 213 94 0 0 chr2 88358815 88358847 -162329007 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 1845 178 36 7 chr2 88358847 88358964 -162328890 - AluJo SINE Alu -199 113 1 565 262 80 19 chr2 88359169 88359349 -162328505 - MIR3 SINE MIR -21 187 20 2288 114 0 3 chr2 88360469 88360768 -162327086 + AluSx SINE Alu 1 298 -14 1215 126 0 0 chr2 88360781 88360948 -162326906 + AluSg/x SINE Alu 128 294 -16 229 268 53 14 chr2 88361589 88361709 -162326145 + MIR SINE MIR 51 173 -82 1149 252 140 13 chr2 88361723 88362172 -162325682 - LTR33 LTR ERVL -15 506 1 332 161 125 18 chr2 88362299 88362411 -162325443 - MER113 DNA MER1_type? -397 124 1 242 200 0 0 chr2 88362416 88362461 -162325393 + MIR3 SINE MIR 158 202 -6 2021 82 4 0 chr2 88362650 88362932 -162324922 + AluSp SINE Alu 40 322 0 1467 247 53 30 chr2 88362943 88363412 -162324442 + L1ME3A LINE L1 5675 6154 -16 777 210 34 84 chr2 88364473 88364711 -162323143 + Charlie8 DNA MER1_type 50 275 -2142 846 314 120 35 chr2 88364746 88366094 -162321760 - L1MEd LINE L1 -4749 1561 41 1818 189 72 107 chr2 88366237 88366731 -162321123 + MLT1E3 LTR MaLR 1 511 -113 1934 149 10 3 chr2 88366731 88367027 -162320827 - AluJb SINE Alu -14 298 1 1818 189 72 107 chr2 88367027 88367045 -162320809 + MLT1E3 LTR MaLR 511 528 -96 2806 138 39 30 chr2 88367045 88367364 -162320490 + LOR1a LTR ERV1 3 330 -167 2126 137 0 0 chr2 88367364 88367685 -162320169 - AluSq SINE Alu 0 321 1 2806 138 39 30 chr2 88367685 88367855 -162319999 + LOR1a LTR ERV1 330 497 0 1818 189 72 107 chr2 88367855 88367977 -162319877 + MLT1E3 LTR MaLR 528 614 -10 1756 146 29 11 chr2 88368127 88368402 -162319452 - AluJo SINE Alu -32 280 1 2321 122 33 25 chr2 88368526 88368887 -162318967 - THE1B LTR MaLR 0 364 1 1745 143 31 4 chr2 88368899 88369373 -162318481 + MER51A LTR ERV1 1 640 0 662 243 96 55 chr2 88369373 88369591 -162318263 + MIR SINE MIR 29 255 -7 795 246 16 16 chr2 88370594 88370785 -162317069 - MIR SINE MIR -64 198 8 350 319 24 5 chr2 88370873 88370998 -162316856 + MIR3 SINE MIR 53 179 -29 269 341 29 14 chr2 88371592 88371730 -162316124 + L3 LINE CR1 826 965 -612 467 300 149 43 chr2 88371847 88372151 -162315703 + L3 LINE CR1 1136 1493 -84 2290 97 7 0 chr2 88372151 88372440 -162315414 + AluSq SINE Alu 1 291 -22 467 300 149 43 chr2 88372440 88372532 -162315322 + L3 LINE CR1 1493 1574 -3 216 188 0 42 chr2 88372768 88372816 -162315038 + L2 LINE L2 3184 3229 -84 362 365 87 23 chr2 88372909 88373175 -162314679 + L2 LINE L2 2623 2905 -409 1449 112 9 0 chr2 88373193 88373407 -162314447 - AluSg/x SINE Alu 0 312 97 192 366 69 11 chr2 88374503 88374678 -162313176 - L2 LINE L2 -349 2965 2781 275 321 0 62 chr2 88375508 88375620 -162312234 - MIR SINE MIR -66 142 38 410 283 40 35 chr2 88375624 88375822 -162312032 - L1ME1 LINE L1 0 6166 5968 2141 123 0 0 chr2 88377162 88377472 -162310382 + AluSg SINE Alu 1 310 0 306 0 0 0 chr2 88378487 88378521 -162309333 + (CA)n Simple_repeat Simple_repeat 2 35 0 1708 62 9 9 chr2 88378737 88378963 -162308891 - AluY SINE Alu -5 306 81 1610 173 0 32 chr2 88378966 88379278 -162308576 - AluJb SINE Alu -7 305 4 1692 158 81 3 chr2 88379512 88379834 -162308020 - L1MB2 LINE L1 0 6171 5825 1216 159 13 9 chr2 88380551 88380778 -162307076 - AluJb SINE Alu 0 312 85 1005 133 0 0 chr2 88381283 88381433 -162306421 + AluJo SINE Alu 1 150 -162 2029 116 0 26 chr2 88382161 88382463 -162305391 - AluSx SINE Alu -18 294 1 796 303 83 6 chr2 88382829 88383189 -162304665 + MARNA DNA Mariner 184 571 -15 39 22 0 0 chr2 88384302 88384348 -162303506 + AT_rich Low_complexity Low_complexity 1 46 0 193 276 194 10 chr2 88384473 88384571 -162303283 - MER5B DNA MER1_type -57 121 6 848 261 173 27 chr2 88384759 88385315 -162302539 + L1ME4a LINE L1 5262 5898 -223 2301 68 14 0 chr2 88385319 88385614 -162302240 + AluSp SINE Alu 1 299 -14 214 260 130 40 chr2 88386022 88386122 -162301732 - L2 LINE L2 -3 3269 3161 525 320 34 75 chr2 88386411 88386733 -162301121 + L3 LINE CR1 538 846 -731 1501 103 0 13 chr2 88386868 88387092 -162300762 - AluSg SINE Alu -89 221 1 3471 148 48 0 chr2 88390054 88390674 -162297180 - L1MA4 LINE L1 -5 7714 7065 2273 121 26 9 chr2 88390674 88391021 -162296833 + THE1A LTR MaLR 1 353 -2 15097 166 59 24 chr2 88391021 88394729 -162293125 - L1MA4 LINE L1 -648 7071 3225 2201 112 0 0 chr2 88394729 88395034 -162292820 - AluY SINE Alu -6 305 1 15097 166 59 24 chr2 88395034 88395262 -162292592 - L1MA4 LINE L1 -4494 3225 3006 830 162 63 0 chr2 88395313 88395455 -162292399 - AluJo SINE Alu -76 236 86 1364 154 5 5 chr2 88395455 88395675 -162292179 - AluJo SINE Alu -92 220 1 636 143 0 19 chr2 88395729 88395834 -162292020 + AluSg/x SINE Alu 193 295 -15 224 343 0 0 chr2 88396004 88396074 -162291780 + L2 LINE L2 3234 3303 -10 288 0 0 0 chr2 88396755 88396787 -162291067 + (CA)n Simple_repeat Simple_repeat 1 32 0 1913 174 40 3 chr2 88396787 88397138 -162290716 - MLT1A1 LTR MaLR -1 364 1 442 86 0 0 chr2 88397818 88397876 -162289978 + AluSg/x SINE Alu 68 125 -185 2098 102 0 7 chr2 88398161 88398485 -162289369 - AluSx SINE Alu 0 322 1 202 316 88 7 chr2 88399971 88400107 -162287747 + MIR3 SINE MIR 7 153 -55 5707 199 46 8 chr2 88400661 88401061 -162286793 + L1MB7 LINE L1 3986 4369 -1815 1891 148 0 3 chr2 88401061 88401351 -162286503 + AluSx SINE Alu 3 291 -21 5707 199 46 8 chr2 88401351 88402425 -162285429 + L1MB7 LINE L1 4369 5571 -613 2254 79 0 38 chr2 88402425 88402743 -162285111 + AluSc SINE Alu 1 306 -3 5707 199 46 8 chr2 88402743 88403381 -162284473 + L1MB7 LINE L1 5571 6183 -1 3046 57 36 5 chr2 88403969 88404357 -162283497 + MLT2A1 LTR ERVL 1 400 -44 332 256 64 48 chr2 88404370 88404495 -162283359 - L1MCa LINE L1 -4359 2067 1941 226 140 80 10 chr2 88404499 88404599 -162283255 + (TTATA)n Simple_repeat Simple_repeat 1 107 0 272 36 268 18 chr2 88404600 88404656 -162283198 + MLT2A1 LTR ERVL 375 444 0 392 171 29 0 chr2 88404836 88404906 -162282948 + MER69 DNA AcHobo 1 72 -2454 279 231 22 11 chr2 88404906 88404997 -162282857 - L1MEc LINE L1 -3340 2875 2784 963 219 159 83 chr2 88404998 88405275 -162282579 - MLT1B LTR MaLR 0 390 146 1818 169 0 0 chr2 88405275 88405577 -162282277 + AluJb SINE Alu 3 304 -8 963 219 159 83 chr2 88405577 88405720 -162282134 - MLT1B LTR MaLR -244 146 15 1844 262 66 46 chr2 88405737 88406989 -162280865 - L1MEc LINE L1 -3428 2787 1561 594 154 17 0 chr2 88407035 88407152 -162280702 + L1MCb LINE L1 1076 1194 -4851 351 184 143 20 chr2 88407168 88407266 -162280588 + 7SK RNA RNA 66 175 -18 1731 173 3 3 chr2 88407309 88407592 -162280262 + MLT1A1 LTR MaLR 83 365 0 577 252 46 6 chr2 88407606 88407781 -162280073 - MIR SINE MIR -63 145 2 243 136 0 0 chr2 88408060 88408104 -162279750 + L1MB2 LINE L1 6128 6171 0 280 148 0 33 chr2 88408116 88408177 -162279677 + L1MC/D LINE L1 5697 5755 -2053 870 222 98 31 chr2 88408177 88408402 -162279452 - MIR SINE MIR -4 258 19 281 220 21 85 chr2 88408598 88408704 -162279150 + L1ME LINE L1 5603 5702 -460 2249 103 0 0 chr2 88408705 88409007 -162278847 + AluSg SINE Alu 1 302 -8 324 263 12 0 chr2 88409196 88409276 -162278578 - LTR33A LTR ERVL 0 523 443 210 191 0 0 chr2 88409379 88409421 -162278433 + (CTG)n Simple_repeat Simple_repeat 2 43 0 279 246 158 18 chr2 88409449 88409563 -162278291 - LTR50 LTR ERVL -649 146 17 270 152 0 22 chr2 88409953 88409999 -162277855 + MER69 DNA AcHobo 736 780 -1746 280 241 27 62 chr2 88410181 88410203 -162277651 + MIR SINE MIR 14 35 -227 2377 51 0 0 chr2 88410203 88410496 -162277358 + AluY SINE Alu 1 293 -18 280 241 27 62 chr2 88410496 88410585 -162277269 + MIR SINE MIR 35 121 -141 27 29 0 0 chr2 88410894 88410928 -162276926 + AT_rich Low_complexity Low_complexity 1 34 0 2134 157 4 62 chr2 88411185 88411638 -162276216 - L1PB4 LINE L1 0 6156 5730 382 253 23 0 chr2 88413171 88413258 -162274596 + MIR SINE MIR 61 149 -113 317 324 54 27 chr2 88414056 88414167 -162273687 - MIR SINE MIR -75 133 20 2170 103 3 0 chr2 88414751 88415051 -162272803 - AluSx SINE Alu -11 301 1 472 260 107 0 chr2 88415538 88415688 -162272166 + MIR SINE MIR 61 226 -36 458 254 155 33 chr2 88415788 88416001 -162271853 - MIR SINE MIR -3 259 21 26 50 0 0 chr2 88416498 88416538 -162271316 + GC_rich Low_complexity Low_complexity 1 40 0 380 246 54 31 chr2 88416845 88416975 -162270879 + MIR3 SINE MIR 73 205 -3 627 241 16 131 chr2 88417311 88417684 -162270170 + MER46C DNA MER2_type 7 336 -2 1881 153 10 0 chr2 88417900 88418194 -162269660 - AluJb SINE Alu -15 297 1 806 236 48 56 chr2 88418207 88418457 -162269397 - L1MD2 LINE L1 -17 6342 6095 739 215 32 109 chr2 88418453 88418764 -162269090 - L1M4 LINE L1 -935 5211 4925 * 244 259 0 0 chr2 88418822 88418876 -162268978 - MIR SINE MIR -69 139 86 1082 256 50 65 chr2 88418876 88419047 -162268807 + MLT1I LTR MaLR 1 173 -236 1764 139 10 21 chr2 88419047 88419356 -162268498 + AluSx SINE Alu 1 306 0 1082 256 50 65 chr2 88419356 88419586 -162268268 + MLT1I LTR MaLR 173 397 -12 233 243 65 142 chr2 88420113 88420450 -162267404 + MLT1J LTR MaLR 27 337 -174 253 254 82 36 chr2 88420477 88420587 -162267267 + MLT1L LTR MaLR 501 615 0 22 0 0 0 chr2 88421399 88421421 -162266433 + AT_rich Low_complexity Low_complexity 1 22 0 614 268 26 7 chr2 88421491 88421644 -162266210 - MIR SINE MIR -105 157 2 2715 96 3 6 chr2 88421770 88422134 -162265720 + THE1B LTR MaLR 1 363 -1 957 273 99 26 chr2 88422138 88422560 -162265294 - L1MC4a LINE L1 -1965 5843 5391 432 174 0 141 chr2 88422569 88422690 -162265164 + MIR SINE MIR 159 262 0 273 320 0 0 chr2 88422782 88422857 -162264997 + (TA)n Simple_repeat Simple_repeat 1 75 0 309 268 100 16 chr2 88423324 88423510 -162264344 + MIR3 SINE MIR 7 208 -54 2089 164 27 0 chr2 88423878 88424244 -162263610 + L1MB4 LINE L1 5805 6180 0 1148 260 0 4 chr2 88424564 88424841 -162263013 - AluSx SINE Alu 0 312 37 2197 128 0 3 chr2 88425208 88425521 -162262333 - AluSx SINE Alu 0 312 1 1578 224 19 17 chr2 88425715 88426077 -162261777 - MLT1A1 LTR MaLR -2 363 1 1999 148 78 20 chr2 88426729 88427074 -162260780 - MLT1A1 LTR MaLR 0 365 1 925 270 78 45 chr2 88427186 88427416 -162260438 - MLT1J LTR MaLR -54 457 207 2060 196 175 14 chr2 88427416 88427902 -162259952 - MLT1F1 LTR MaLR 0 567 4 925 270 78 45 chr2 88427902 88428071 -162259783 - MLT1J LTR MaLR -304 207 45 395 251 62 62 chr2 88428208 88428435 -162259419 + L1ME4a LINE L1 5851 6077 -44 455 315 17 6 chr2 88429155 88429333 -162258521 + MER117 DNA MER1_type 1 180 -17 270 258 100 43 chr2 88429872 88430239 -162257615 + L1P5 LINE L1 5318 5717 -445 948 246 130 36 chr2 88430313 88430514 -162257340 - L2 LINE L2 -45 3268 3087 2116 106 3 0 chr2 88430514 88430828 -162257026 + AluSx SINE Alu 1 315 0 948 246 130 36 chr2 88430828 88431100 -162256754 - L2 LINE L2 -226 3087 2752 368 301 115 0 chr2 88431237 88431446 -162256408 - L2 LINE L2 -1223 2091 1859 558 222 49 7 chr2 88432212 88432356 -162255498 - MIR3 SINE MIR -27 181 32 1674 177 11 69 chr2 88434193 88434628 -162253226 + L1MB4 LINE L1 5766 6175 -5 316 231 13 0 chr2 88434647 88434725 -162253129 + MER103 DNA DNA 8 86 -80 320 308 19 0 chr2 88436660 88436764 -162251090 + MER117 DNA MER1_type 36 141 -56 694 183 16 102 chr2 88438700 88438886 -162248968 + MER5B DNA MER1_type 1 170 -8 370 377 33 55 chr2 88438886 88439215 -162248639 + L2 LINE L2 2946 3267 -5 411 316 136 19 chr2 88439985 88440140 -162247714 + MIR SINE MIR 18 190 -72 245 200 0 18 chr2 88441693 88441748 -162246106 - MIR SINE MIR -186 76 23 536 279 27 7 chr2 88441995 88442142 -162245712 + MIR3 SINE MIR 33 182 -26 398 298 0 9 chr2 88443598 88443712 -162244142 + MIR3 SINE MIR 42 154 -54 500 214 31 75 chr2 88443769 88443901 -162243953 - MER103 DNA DNA -14 152 27 1629 173 31 17 chr2 88443901 88444190 -162243664 - AluJo SINE Alu -19 293 1 500 214 31 75 chr2 88444190 88444216 -162243638 - MER103 DNA DNA -139 27 1 2271 83 10 3 chr2 88444860 88445162 -162242692 - AluSq SINE Alu -5 308 5 620 259 76 0 chr2 88445306 88445464 -162242390 + L2 LINE L2 3128 3297 -16 1767 142 4 0 chr2 88445474 88445735 -162242119 + AluSx SINE Alu 17 278 -34 207 0 0 0 chr2 88445750 88445773 -162242081 + (CAA)n Simple_repeat Simple_repeat 2 24 0 322 179 0 0 chr2 88446483 88446539 -162241315 + MIR SINE MIR 79 134 -128 1706 184 0 7 chr2 88446545 88446849 -162241005 - AluJb SINE Alu 0 312 11 1793 146 4 0 chr2 88446868 88447136 -162240718 - AluSx SINE Alu -11 301 33 258 316 49 31 chr2 88447150 88447375 -162240479 - L1ME4a LINE L1 -38 6083 5855 251 222 32 0 chr2 88447751 88447814 -162240040 - L2 LINE L2 -2 3311 3247 181 320 0 0 chr2 88448197 88448247 -162239607 - MIR SINE MIR -8 254 205 217 237 21 113 chr2 88448255 88448352 -162239502 + L2 LINE L2 3179 3266 -47 399 328 89 6 chr2 88448594 88448774 -162239080 - MIR SINE MIR -8 254 60 195 211 18 70 chr2 88448766 88448823 -162239031 + MIR SINE MIR 93 146 -116 * 234 274 0 0 chr2 88450122 88450173 -162237681 + (CA)n Simple_repeat Simple_repeat 1 51 0 868 274 22 13 chr2 88450179 88450405 -162237449 + MIR SINE MIR 1 228 -34 409 331 0 8 chr2 88450609 88450742 -162237112 - L2 LINE L2 -1 3312 3181 329 261 68 0 chr2 88451268 88451356 -162236498 + L2 LINE L2 3155 3248 -24 195 100 0 0 chr2 88451669 88451699 -162236155 + (CCCTG)n Simple_repeat Simple_repeat 4 33 0 275 286 112 9 chr2 88452057 88452173 -162235681 - MIR SINE MIR -62 146 30 268 348 40 0 chr2 88452426 88452554 -162235300 + MIR SINE MIR 79 211 -51 230 229 0 0 chr2 88452820 88452868 -162234986 + MLT1L LTR MaLR 344 391 -224 232 236 0 28 chr2 88453339 88453411 -162234443 + (TATAA)n Simple_repeat Simple_repeat 4 73 0 474 234 201 25 chr2 88453486 88453725 -162234129 - L2 LINE L2 -186 3086 2806 27 0 0 0 chr2 88456035 88456062 -162231792 + GC_rich Low_complexity Low_complexity 1 27 0 369 327 58 26 chr2 88456474 88456630 -162231224 + MIR SINE MIR 20 180 -82 610 299 41 16 chr2 88457050 88457244 -162230610 - MIR SINE MIR -51 211 13 449 336 51 7 chr2 88458118 88458347 -162229507 + MIR SINE MIR 20 258 -4 188 243 204 19 chr2 88458479 88458582 -162229272 - MIR3 SINE MIR -28 180 59 195 162 0 0 chr2 88459357 88459394 -162228460 + CT-rich Low_complexity Low_complexity 2 38 0 643 43 32 11 chr2 88460844 88460938 -162226916 + (GGGGA)n Simple_repeat Simple_repeat 2 97 0 523 298 105 5 chr2 88462448 88462639 -162225215 - MIR SINE MIR -48 214 5 562 339 54 43 chr2 88463601 88463952 -162223902 + L2 LINE L2 2918 3272 0 304 306 58 0 chr2 88464099 88464220 -162223634 - MIR3 SINE MIR 0 208 81 324 0 0 0 chr2 88464746 88464782 -162223072 + (CA)n Simple_repeat Simple_repeat 2 37 0 285 211 0 18 chr2 88465633 88465690 -162222164 - L2 LINE L2 -4 3309 3254 249 158 0 0 chr2 88465690 88465728 -162222126 + MER20 DNA MER1_type 1 38 -181 393 158 0 63 chr2 88465770 88465865 -162221989 + MER20 DNA MER1_type 130 218 -1 274 254 28 0 chr2 88466106 88466177 -162221677 + L2 LINE L2 3200 3272 0 445 319 84 0 chr2 88466312 88466478 -162221376 + MIR SINE MIR 49 228 -34 393 240 62 0 chr2 88467680 88467776 -162220078 + MIR SINE MIR 52 153 -109 233 358 123 0 chr2 88467913 88468075 -162219779 - MIR SINE MIR -44 218 37 431 305 86 6 chr2 88468515 88468689 -162219165 + MIR SINE MIR 20 207 -55 363 278 107 30 chr2 88469047 88469216 -162218638 + MIR SINE MIR 12 193 -69 192 40 0 0 chr2 88469888 88469913 -162217941 + (CAGAC)n Simple_repeat Simple_repeat 5 29 0 455 257 118 40 chr2 88470258 88470410 -162217444 + MIR SINE MIR 93 256 -6 2032 134 3 6 chr2 88470517 88470830 -162217024 + AluSx SINE Alu 1 312 0 398 355 42 0 chr2 88470863 88471029 -162216825 - MIR SINE MIR -70 192 20 199 200 127 0 chr2 88471236 88471291 -162216563 - MIR SINE MIR -65 143 82 340 216 46 14 chr2 88471846 88471965 -162215889 + MIR SINE MIR 66 145 -63 228 354 35 3 chr2 88472062 88472218 -162215636 + MIR SINE MIR 15 178 -30 198 0 0 0 chr2 88472403 88472425 -162215429 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 242 282 0 3 chr2 88472622 88472693 -162215161 - MIR SINE MIR -85 123 54 25 75 0 0 chr2 88474400 88474453 -162213401 + GC_rich Low_complexity Low_complexity 1 53 0 232 236 18 0 chr2 88474474 88474529 -162213325 + C-rich Low_complexity Low_complexity 3 58 0 193 257 0 71 chr2 88475412 88475482 -162212372 + MIR SINE MIR 124 188 -74 797 244 60 14 chr2 88475560 88475777 -162212077 + MIR SINE MIR 33 259 -3 180 0 0 0 chr2 88476376 88476396 -162211458 + (CA)n Simple_repeat Simple_repeat 2 21 0 282 306 72 9 chr2 88477017 88477128 -162210726 + MIR SINE MIR 109 226 -36 268 269 26 0 chr2 88477574 88477652 -162210202 + MIR SINE MIR 56 135 -127 268 328 99 12 chr2 88478333 88478443 -162209411 - MIR SINE MIR -67 195 63 2592 56 0 3 chr2 88478443 88478745 -162209109 + AluY SINE Alu 3 303 -8 268 328 99 12 chr2 88478745 88478805 -162209049 - MIR SINE MIR -199 63 10 201 261 114 11 chr2 88479806 88479894 -162207960 + L2 LINE L2 2672 2768 -546 337 290 0 0 chr2 88479932 88480025 -162207829 + MLT1H LTR MaLR 47 139 -451 512 230 116 24 chr2 88480116 88480352 -162207502 + MLT1H LTR MaLR 282 549 0 1691 256 39 12 chr2 88480375 88480864 -162206990 + L2 LINE L2 2811 3312 -1 2247 132 0 3 chr2 88481156 88481466 -162206388 + AluSx SINE Alu 1 309 -3 334 214 71 31 chr2 88481555 88481653 -162206201 - L2 LINE L2 -32 3281 3180 188 299 30 0 chr2 88481773 88481840 -162206014 - L2 LINE L2 -223 3049 2981 240 315 0 0 chr2 88481843 88481935 -162205919 + L2 LINE L2 2969 3060 -253 183 42 0 0 chr2 88483188 88483212 -162204642 + (TTC)n Simple_repeat Simple_repeat 2 25 0 227 237 0 34 chr2 88483567 88483626 -162204228 - MIR3 SINE MIR -1 207 151 836 249 5 5 chr2 88483626 88483819 -162204035 + MER117 DNA MER1_type 5 197 0 225 0 0 0 chr2 88483837 88483862 -162203992 + (T)n Simple_repeat Simple_repeat 1 25 0 313 290 43 0 chr2 88484542 88484635 -162203219 - MIR3 SINE MIR -38 170 74 674 258 40 18 chr2 88485163 88485388 -162202466 + MIR SINE MIR 21 250 -12 225 244 78 11 chr2 88485390 88485480 -162202374 + L2 LINE L2 2957 3052 -220 420 20 0 0 chr2 88485817 88485866 -162201988 + (CA)n Simple_repeat Simple_repeat 2 50 0 229 369 32 21 chr2 88487418 88487605 -162200249 + MER5A DNA MER1_type 1 189 0 1066 212 54 88 chr2 88487934 88488307 -162199547 - L1MC4 LINE L1 -817 7006 6672 295 233 164 34 chr2 88488587 88488643 -162199211 + MIR SINE MIR 98 145 -117 1890 173 0 3 chr2 88488643 88488950 -162198904 - AluJo SINE Alu -6 306 1 295 233 164 34 chr2 88488950 88489039 -162198815 + MIR SINE MIR 145 262 0 1020 266 58 28 chr2 88489430 88489824 -162198030 + MLT1I LTR MaLR 1 406 -3 610 314 91 30 chr2 88490528 88490935 -162196919 - MLT1K LTR MaLR -23 565 134 1670 181 59 0 chr2 88490977 88491092 -162196762 + AluJo SINE Alu 1 108 -204 276 30 0 0 chr2 88491092 88491125 -162196729 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 1670 181 59 0 chr2 88491125 88491296 -162196558 + AluJo SINE Alu 108 304 -8 629 233 100 0 chr2 88491378 88491528 -162196326 - MER96 DNA MER1_type? 0 175 11 2552 183 72 6 chr2 88491534 88492048 -162195806 - MLT1F1 LTR MaLR -7 560 13 1905 155 0 39 chr2 88492065 88492375 -162195479 - AluJo SINE Alu -10 302 5 253 267 0 0 chr2 88492480 88492540 -162195314 + MER117 DNA MER1_type 3 62 -135 472 252 181 58 chr2 88492575 88492900 -162194954 + MLT1L LTR MaLR 21 385 -230 437 281 58 0 chr2 88492946 88493085 -162194769 + MLT1L LTR MaLR 467 613 -2 505 286 79 10 chr2 88493574 88493777 -162194077 + MLT1J LTR MaLR 24 240 -271 350 263 35 9 chr2 88493871 88493985 -162193869 + MLT1J LTR MaLR 378 494 -17 330 307 21 29 chr2 88493985 88494125 -162193729 + CT-rich Low_complexity Low_complexity 2 140 0 288 0 0 0 chr2 88495611 88495643 -162192211 + (TC)n Simple_repeat Simple_repeat 1 32 0 214 290 59 95 chr2 88495703 88495872 -162191982 + L2 LINE L2 2948 3110 -162 2601 27 10 3 chr2 88496260 88496554 -162191300 + AluY SINE Alu 1 296 -15 2359 86 13 0 chr2 88497802 88498104 -162189750 + AluSq SINE Alu 1 306 -7 524 259 18 64 chr2 88499610 88499830 -162188024 + MIR SINE MIR 53 262 0 749 116 9 0 chr2 88500242 88500354 -162187500 + U1 snRNA snRNA 1 113 -52 284 165 46 55 chr2 88500908 88501017 -162186837 - L1ME4a LINE L1 -6 6115 6008 368 317 88 48 chr2 88501237 88501464 -162186390 - L1ME4a LINE L1 -281 5840 5605 370 258 32 19 chr2 88501494 88501649 -162186205 - L1ME4a LINE L1 -8 6113 5957 1868 88 99 15 chr2 88501670 88501958 -162185896 + AluSq SINE Alu 1 310 0 1929 173 10 7 chr2 88502085 88502392 -162185462 - AluJo SINE Alu -4 308 1 688 132 0 0 chr2 88502420 88502526 -162185328 - FLAM_A SINE Alu -15 127 22 430 298 16 4 chr2 88502554 88502727 -162185127 - L1M3 LINE L1 -303 5818 5662 295 271 33 61 chr2 88502823 88503004 -162184850 - HAL1 LINE L1 -1539 968 793 * 2408 270 69 67 chr2 88503003 88504420 -162183434 + HAL1 LINE L1 4 1423 -1084 1597 147 40 4 chr2 88504524 88504775 -162183079 + AluJo SINE Alu 42 301 -11 950 234 110 7 chr2 88505279 88505569 -162182285 + MER5C DNA MER1_type 1 320 -4 411 272 21 40 chr2 88505740 88505915 -162181939 - MIR SINE MIR -30 178 3 2198 133 10 0 chr2 88505946 88506254 -162181600 - AluSx SINE Alu -1 311 1 246 229 33 0 chr2 88506269 88506330 -162181524 + L1MC/D LINE L1 5494 5556 -2252 1240 188 8 29 chr2 88506366 88506611 -162181243 - MLT2B1 LTR ERVL -2 518 279 342 248 9 35 chr2 88506632 88506745 -162181109 + L2 LINE L2 2212 2321 -993 209 283 22 54 chr2 88506787 88506879 -162180975 + L2 LINE L2 2439 2527 -787 1064 205 22 18 chr2 88506880 88507109 -162180745 + MER72 LTR ERV1 1 230 -492 1016 198 0 7 chr2 88507128 88507466 -162180388 + MER72 LTR ERV1 335 721 -1 819 237 159 31 chr2 88507550 88507871 -162179983 + MLT1I LTR MaLR 48 409 0 709 302 114 13 chr2 88507905 88508426 -162179428 + L2 LINE L2 2635 3214 -99 266 364 0 43 chr2 88509024 88509186 -162178668 - MIR SINE MIR -62 146 29 2452 70 0 3 chr2 88509719 88510019 -162177835 + AluY SINE Alu 1 299 -12 270 310 62 41 chr2 88510318 88510463 -162177391 + MER91B DNA MER1_type 9 156 -34 340 219 73 0 chr2 88510970 88511052 -162176802 + MER103 DNA DNA 72 159 -7 741 147 51 6 chr2 88511269 88511425 -162176429 - L1MA7 LINE L1 -4 6287 6125 424 216 29 0 chr2 88511472 88511574 -162176280 - L1MA8 LINE L1 -141 6150 6046 451 253 39 17 chr2 88511793 88511928 -162175926 + MLT2E LTR ERVL 19 149 -479 2561 175 56 61 chr2 88512674 88513120 -162174734 - MLT1F1 LTR MaLR 0 567 123 1849 189 0 0 chr2 88513120 88513426 -162174428 + AluJo SINE Alu 1 306 -6 2561 175 56 61 chr2 88513426 88513549 -162174305 - MLT1F1 LTR MaLR -444 123 1 1089 215 0 5 chr2 88513561 88513770 -162174084 - MER6B DNA MER2_type 0 210 3 376 320 26 20 chr2 88513776 88513798 -162174056 + MIR3 SINE MIR 30 50 -158 2148 115 0 7 chr2 88513798 88514126 -162173728 - AluJb SINE Alu 0 326 1 376 320 26 20 chr2 88514126 88514255 -162173599 + MIR3 SINE MIR 50 183 -25 488 265 60 0 chr2 88514433 88514599 -162173255 + MER5B DNA MER1_type 1 176 -2 421 227 41 0 chr2 88515204 88515301 -162172553 + MER81 DNA DNA 5 105 -9 287 327 73 0 chr2 88515716 88515826 -162172028 + L1ME LINE L1 5491 5608 -513 2258 104 3 0 chr2 88515847 88516146 -162171708 + AluSp SINE Alu 4 303 -10 1683 213 23 44 chr2 88516158 88516638 -162171216 - L1ME2 LINE L1 -2 6162 5693 228 67 0 0 chr2 88516639 88516669 -162171185 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 785 84 49 0 chr2 88516743 88516886 -162170968 + L1MA7 LINE L1 6140 6289 -2 2562 161 14 50 chr2 88516889 88517308 -162170546 - L1MB4 LINE L1 -10 6170 5776 1920 162 3 3 chr2 88517308 88517611 -162170243 - AluJo SINE Alu -9 303 1 2562 161 14 50 chr2 88517611 88517768 -162170086 - L1MB4 LINE L1 -404 5776 5615 1279 232 50 36 chr2 88517769 88518047 -162169807 - L1ME2 LINE L1 -460 5704 5417 2246 114 0 3 chr2 88518047 88518344 -162169510 + AluSx SINE Alu 1 296 -16 1279 232 50 36 chr2 88518344 88518483 -162169371 - L1ME2 LINE L1 -747 5417 5281 422 257 78 0 chr2 88518486 88518749 -162169105 + L1MC4 LINE L1 4808 5112 -1034 694 44 0 0 chr2 88518752 88518843 -162169011 - AluSc SINE Alu -8 301 211 378 305 0 31 chr2 88519271 88519399 -162168455 + MIR SINE MIR 21 144 -118 1674 174 24 7 chr2 88519706 88520000 -162167854 + AluJb SINE Alu 1 299 -13 2356 112 3 0 chr2 88520093 88520405 -162167449 + AluSq SINE Alu 1 313 0 258 229 128 0 chr2 88520436 88520542 -162167312 + MLT1J LTR MaLR 93 277 -332 231 318 9 9 chr2 88520773 88520883 -162166971 + L1MC4 LINE L1 5772 5881 -1927 353 82 0 0 chr2 88520930 88520979 -162166875 - MER53 DNA DNA -64 125 77 180 329 7 95 chr2 88523245 88523291 -162164563 + MIR SINE MIR 136 184 -78 1885 167 7 0 chr2 88523291 88523590 -162164264 - AluJb SINE Alu -11 301 1 180 329 7 95 chr2 88523590 88523680 -162164174 + MIR SINE MIR 184 260 -2 568 315 28 6 chr2 88524582 88524760 -162163094 + MIR SINE MIR 11 192 -70 221 304 0 29 chr2 88525578 88525647 -162162207 - L2 LINE L2 -20 3252 3186 839 290 63 75 chr2 88525880 88526452 -162161402 - MLT1K LTR MaLR 0 588 24 2170 235 83 55 chr2 88526486 88526766 -162161088 + L1MC4 LINE L1 6892 7163 -879 198 0 0 0 chr2 88526766 88526788 -162161066 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 842 199 0 0 chr2 88526789 88526950 -162160904 - FAM SINE Alu -14 161 1 2170 235 83 55 chr2 88526950 88527190 -162160664 + L1MC4 LINE L1 7163 7395 -647 2051 112 3 39 chr2 88527190 88527502 -162160352 - AluSx SINE Alu -7 305 5 2170 235 83 55 chr2 88527502 88527937 -162159917 + L1MC4 LINE L1 7395 7983 -59 1183 156 102 59 chr2 88528007 88528038 -162159816 + MSTB1 LTR MaLR 24 52 -380 2105 102 60 0 chr2 88528038 88528321 -162159533 + AluSp SINE Alu 1 300 -13 1183 156 102 59 chr2 88528321 88528545 -162159309 + MSTB1 LTR MaLR 52 290 -142 477 100 120 80 chr2 88528547 88528647 -162159207 - AluSg/x SINE Alu -22 290 187 2146 244 70 25 chr2 88528647 88529500 -162158354 - L1M4 LINE L1 -2182 4775 3884 1420 175 4 9 chr2 88529509 88529737 -162158117 - AluJo SINE Alu -85 227 1 1406 235 5 5 chr2 88529737 88530111 -162157743 - L1M4 LINE L1 -3059 3898 3525 487 188 34 26 chr2 88530142 88530259 -162157595 - L1M4 LINE L1 -4823 2136 2019 881 132 13 0 chr2 88530281 88530433 -162157421 + CT-rich Low_complexity Low_complexity 2 155 0 2115 110 0 14 chr2 88530434 88530716 -162157138 - AluSx SINE Alu -33 279 2 2454 191 51 57 chr2 88530719 88531101 -162156753 - L1M4 LINE L1 -4833 2022 1639 2281 109 13 0 chr2 88531101 88531405 -162156449 - AluSq SINE Alu -1 312 5 2454 191 51 57 chr2 88531405 88532022 -162155832 - L1M4 LINE L1 -5216 1639 1025 1127 128 5 87 chr2 88532033 88532251 -162155603 - MER21A LTR ERV1 -19 912 713 199 156 0 0 chr2 88532252 88532284 -162155570 - MIR SINE MIR -190 72 41 1966 125 8 70 chr2 88534198 88534567 -162153287 - MER7A DNA MER2_type -1 345 2 539 232 127 0 chr2 88534727 88534869 -162152985 - MIR SINE MIR -12 250 91 794 249 19 16 chr2 88534969 88535253 -162152601 + L1MC4a LINE L1 6413 6611 -1197 2882 195 58 28 chr2 88535346 88536019 -162151835 + L1MC4a LINE L1 7116 7808 0 278 104 0 21 chr2 88536501 88536549 -162151305 + (ATG)n Simple_repeat Simple_repeat 2 48 0 291 294 185 16 chr2 88536557 88536741 -162151113 - MIR SINE MIR -27 235 21 288 250 29 29 chr2 88537324 88537428 -162150426 + MIR3 SINE MIR 78 181 -27 235 122 0 0 chr2 88539215 88539256 -162148598 + L1MB2 LINE L1 6131 6171 0 2135 91 0 4 chr2 88539376 88539652 -162148202 + AluSx SINE Alu 1 275 -37 242 331 16 40 chr2 88539767 88539891 -162147963 + MLT1K LTR MaLR 399 519 -69 460 121 0 0 chr2 88539900 88539966 -162147888 - FLAM_A SINE Alu -17 125 60 409 256 50 16 chr2 88540395 88540516 -162147338 + L2 LINE L2 3188 3312 -1 2336 106 0 3 chr2 88540747 88541049 -162146805 + AluSq SINE Alu 1 301 -12 202 175 0 48 chr2 88541439 88541502 -162146352 + CT-rich Low_complexity Low_complexity 2 61 0 400 254 58 83 chr2 88541645 88541885 -162145969 - MLT1L LTR MaLR -220 395 162 300 188 24 59 chr2 88541922 88542007 -162145847 - MLT1L LTR MaLR -525 90 9 1839 172 105 9 chr2 88542458 88542877 -162144977 - MLT1C LTR MaLR -8 459 1 3181 175 39 82 chr2 88543967 88544352 -162143502 - L1MB3 LINE L1 -1 6182 5847 2282 86 0 0 chr2 88544352 88544631 -162143223 - AluSg SINE Alu -31 279 1 3181 175 39 82 chr2 88544631 88545041 -162142813 - L1MB3 LINE L1 -336 5847 5421 872 291 88 24 chr2 88545904 88546242 -162141612 + MLT1J2 LTR MaLR 15 330 -120 2365 95 0 10 chr2 88546242 88546546 -162141308 + AluSx SINE Alu 1 301 -11 2052 155 0 22 chr2 88546551 88546868 -162140986 + AluSx SINE Alu 1 310 -2 872 291 88 24 chr2 88546868 88546932 -162140922 + MLT1J2 LTR MaLR 333 449 -1 1564 163 4 8 chr2 88547389 88547641 -162140213 - AluJo SINE Alu -61 251 1 377 228 35 26 chr2 88548780 88548894 -162138960 - MIR SINE MIR -114 148 34 600 176 28 6 chr2 88549251 88549427 -162138427 + (GGATG)n Simple_repeat Simple_repeat 1 180 0 230 94 31 78 chr2 88549439 88549503 -162138351 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 261 0 0 0 chr2 88550293 88550322 -162137532 + (CA)n Simple_repeat Simple_repeat 2 30 0 207 0 0 0 chr2 88550369 88550392 -162137462 + (CA)n Simple_repeat Simple_repeat 2 24 0 267 196 19 37 chr2 88550441 88550548 -162137306 + (CA)n Simple_repeat Simple_repeat 2 106 0 389 12 12 99 chr2 88550565 88550646 -162137208 + (CA)n Simple_repeat Simple_repeat 2 75 0 208 337 0 0 chr2 88550736 88550825 -162137029 + (CA)n Simple_repeat Simple_repeat 2 90 0 235 342 97 0 chr2 88551879 88551993 -162135861 - L2 LINE L2 -5 3267 3143 1844 129 12 0 chr2 88552247 88552502 -162135352 + AluSx SINE Alu 46 303 -9 490 347 55 15 chr2 88552527 88552870 -162134984 - L2 LINE L2 -735 2579 2223 195 274 75 47 chr2 88552883 88552989 -162134865 + MIR SINE MIR 31 139 -123 194 288 45 0 chr2 88554019 88554085 -162133769 + MIR3 SINE MIR 129 197 -11 2458 95 3 0 chr2 88554097 88554403 -162133451 - AluSq SINE Alu -4 309 3 2338 100 3 16 chr2 88556209 88556519 -162131335 + AluSq SINE Alu 1 306 -7 2221 100 3 42 chr2 88556530 88556841 -162131013 + AluSx SINE Alu 2 300 -12 254 261 30 67 chr2 88557154 88557288 -162130566 + MIR3 SINE MIR 12 140 -68 2005 109 3 66 chr2 88558141 88558464 -162129390 + AluSx SINE Alu 1 304 0 899 110 8 18 chr2 88558817 88558985 -162128869 + LTR7 LTR ERV1 1 218 -232 779 154 13 20 chr2 88559174 88559323 -162128531 + LTR7 LTR ERV1 303 450 0 23 0 0 0 chr2 88559605 88559628 -162128226 + AT_rich Low_complexity Low_complexity 1 23 0 1632 157 11 36 chr2 88559770 88559871 -162127983 + AluJb SINE Alu 36 138 -174 2071 134 16 10 chr2 88559871 88560176 -162127678 + AluSq SINE Alu 1 307 -6 1632 157 11 36 chr2 88560176 88560354 -162127500 + AluJb SINE Alu 138 308 -4 488 159 186 9 chr2 88561311 88561424 -162126430 - FRAM SINE Alu -43 133 1 2370 69 0 50 chr2 88561430 88561747 -162126107 - AluY SINE Alu -10 301 1 327 273 145 72 chr2 88561756 88562005 -162125849 - L1ME LINE L1 -392 5729 5463 27 0 0 0 chr2 88562007 88562034 -162125820 + AT_rich Low_complexity Low_complexity 1 27 0 2009 116 0 0 chr2 88562034 88562292 -162125562 - AluSx SINE Alu -54 258 1 531 236 46 7 chr2 88562323 88562525 -162125329 - L1ME LINE L1 -666 5496 5289 2259 79 14 0 chr2 88563012 88563289 -162124565 + AluSp SINE Alu 1 281 -32 183 42 0 0 chr2 88563295 88563319 -162124535 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 2137 130 0 9 chr2 88563645 88563960 -162123894 + AluJb SINE Alu 1 312 0 214 337 84 42 chr2 88564048 88564238 -162123616 - L2 LINE L2 -579 2735 2538 1698 253 73 63 chr2 88564238 88564306 -162123548 + ERVL LTR ERVL 2446 2512 -3252 1339 141 129 0 chr2 88564306 88564569 -162123285 - AluJo SINE Alu -1 301 5 1698 253 73 63 chr2 88564569 88564944 -162122910 + ERVL LTR ERVL 2512 2882 -2882 2500 48 0 3 chr2 88564944 88565257 -162122597 + AluY SINE Alu 3 314 0 1698 253 73 63 chr2 88565257 88565356 -162122498 + ERVL LTR ERVL 2882 3001 -2763 216 97 0 0 chr2 88565356 88565387 -162122467 + (CACG)n Simple_repeat Simple_repeat 1 31 0 1698 253 73 63 chr2 88565387 88565428 -162122426 + ERVL LTR ERVL 3001 3040 -2724 476 263 104 62 chr2 88565431 88565752 -162122102 + LTR41 LTR ERVL 331 737 -36 2141 116 10 3 chr2 88565822 88566115 -162121739 + AluSx SINE Alu 1 295 -17 1702 163 79 4 chr2 88566134 88566411 -162121443 - AluJo SINE Alu -13 299 2 185 237 0 34 chr2 88566411 88566461 -162121393 - L2 LINE L2 -953 2361 2312 2388 100 0 0 chr2 88566467 88566766 -162121088 + AluSx SINE Alu 1 299 -13 302 0 26 0 chr2 88566770 88566808 -162121046 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 564 146 11 0 chr2 88566814 88566903 -162120951 + AluSg/x SINE Alu 187 276 -36 220 324 149 9 chr2 88566905 88567127 -162120727 - L2 LINE L2 -1041 2273 2021 453 306 123 21 chr2 88567186 88567421 -162120433 + LTR16B LTR ERVL 52 310 -154 225 244 0 0 chr2 88568241 88568286 -162119568 - L2 LINE L2 -3 3310 3266 1892 160 40 0 chr2 88569276 88569576 -162118278 - AluJo SINE Alu 0 312 1 2311 118 0 3 chr2 88569776 88570081 -162117773 + AluSx SINE Alu 1 304 -8 497 315 103 14 chr2 88570414 88570627 -162117227 + MIR SINE MIR 17 248 -14 356 165 28 119 chr2 88570848 88570957 -162116897 - MER5A DNA MER1_type -80 109 11 290 238 16 0 chr2 88570980 88571043 -162116811 - MER5B DNA MER1_type 0 178 115 516 169 113 48 chr2 88571043 88571167 -162116687 + FLAM_C SINE Alu 1 132 -11 387 277 10 10 chr2 88571217 88571318 -162116536 - MER20 DNA MER1_type -9 210 110 393 155 10 113 chr2 88571337 88571388 -162116466 - MER5B DNA MER1_type -91 87 49 2366 74 0 27 chr2 88571388 88571687 -162116167 + AluSg1 SINE Alu 6 296 -13 393 155 10 113 chr2 88571687 88571732 -162116122 - MER5B DNA MER1_type -129 49 1 1691 170 38 17 chr2 88572250 88572538 -162115316 + AluJo SINE Alu 9 302 -10 2173 115 0 16 chr2 88573012 88573316 -162114538 + AluSx SINE Alu 1 299 -13 2476 64 0 14 chr2 88573459 88573754 -162114100 - AluY SINE Alu -18 293 3 890 126 0 15 chr2 88573875 88574010 -162113844 - FLAM_C SINE Alu 0 133 1 279 333 94 53 chr2 88574810 88574986 -162112868 - MIR3 SINE MIR -5 203 21 1892 151 6 25 chr2 88575027 88575345 -162112509 - AluJb SINE Alu 0 312 1 189 0 0 0 chr2 88576171 88576192 -162111662 + (A)n Simple_repeat Simple_repeat 1 21 0 874 136 0 0 chr2 88576192 88576317 -162111537 + AluJb SINE Alu 1 125 -187 192 77 0 0 chr2 88576319 88576345 -162111509 + (A)n Simple_repeat Simple_repeat 1 26 0 2336 105 0 0 chr2 88576378 88576673 -162111181 + AluSx SINE Alu 3 297 -15 1601 152 39 18 chr2 88576801 88577084 -162110770 + AluJo SINE Alu 9 297 -15 590 100 12 0 chr2 88577219 88577299 -162110555 + AluS SINE Alu 2 82 -231 582 340 127 22 chr2 88577420 88578011 -162109843 - L1M4 LINE L1 -747 5399 4747 23 33 0 0 chr2 88578108 88578138 -162109716 + AT_rich Low_complexity Low_complexity 1 30 0 2174 92 7 30 chr2 88578281 88578586 -162109268 - AluSx SINE Alu -13 299 2 2284 43 58 0 chr2 88579768 88580073 -162107781 - AluY SINE Alu 0 311 1 526 146 209 0 chr2 88580399 88580509 -162107345 + FLAM_A SINE Alu 1 133 0 791 189 0 0 chr2 88580616 88580738 -162107116 + FLAM_C SINE Alu 2 123 -10 1651 229 47 10 chr2 88581047 88581454 -162106400 - MLT1E2 LTR MaLR 0 626 205 447 219 0 0 chr2 88581468 88581801 -162106053 + (CA)n Simple_repeat Simple_repeat 1 333 0 392 247 93 0 chr2 88582141 88582291 -162105563 - L1ME3A LINE L1 -18 6152 5989 755 222 43 22 chr2 88582371 88582384 -162105470 - L1ME3A LINE L1 -202 5960 5949 2312 126 0 0 chr2 88582384 88582693 -162105161 - AluSq SINE Alu -4 309 1 755 222 43 22 chr2 88582693 88582909 -162104945 - L1ME3A LINE L1 -213 5949 5726 577 270 18 0 chr2 88582931 88583094 -162104760 - L1MA10 LINE L1 0 6334 6169 222 208 0 0 chr2 88583094 88583147 -162104707 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 2070 113 31 0 chr2 88583274 88583293 -162104561 - AluSg SINE Alu -8 302 285 246 32 0 0 chr2 88583293 88583324 -162104530 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 2070 113 31 0 chr2 88583324 88583597 -162104257 - AluSg SINE Alu -25 285 1 346 224 31 0 chr2 88583809 88583907 -162103947 - L1MA9 LINE L1 -30 6282 6182 * 771 173 0 0 chr2 88583874 88584001 -162103853 + L1MB3 LINE L1 5536 5650 -641 891 133 0 22 chr2 88584001 88584136 -162103718 + FLAM_C SINE Alu 1 132 -1 771 173 0 0 chr2 88584136 88584150 -162103704 + L1MB3 LINE L1 5649 5662 -629 577 268 13 25 chr2 88585782 88585939 -162101915 - L2 LINE L2 -1 3312 3158 2135 128 0 0 chr2 88585946 88586227 -162101627 + AluSx SINE Alu 7 287 -25 2568 71 7 0 chr2 88586276 88586584 -162101270 + AluSx SINE Alu 3 312 0 195 42 0 0 chr2 88586585 88586609 -162101245 + (GGGGA)n Simple_repeat Simple_repeat 4 27 0 505 310 35 9 chr2 88586934 88587166 -162100688 + MLT1I LTR MaLR 130 367 -42 907 207 84 13 chr2 88587849 88588131 -162099723 + L1MB3 LINE L1 5767 6009 -174 * 913 130 65 5 chr2 88588116 88588301 -162099553 + L1MB3 LINE L1 5952 6147 -36 2295 93 3 10 chr2 88588301 88588602 -162099252 - AluSc SINE Alu -8 301 3 949 126 0 15 chr2 88588723 88588858 -162098996 - FLAM_C SINE Alu 0 133 1 279 333 94 53 chr2 88589663 88589834 -162098020 - MIR3 SINE MIR -10 198 21 1962 145 6 25 chr2 88589875 88590193 -162097661 - AluJb SINE Alu 0 312 1 189 0 0 0 chr2 88591019 88591040 -162096814 + (A)n Simple_repeat Simple_repeat 1 21 0 874 136 0 0 chr2 88591040 88591165 -162096689 + AluJb SINE Alu 1 125 -187 192 77 0 0 chr2 88591167 88591193 -162096661 + (A)n Simple_repeat Simple_repeat 1 26 0 2336 105 0 0 chr2 88591226 88591521 -162096333 + AluSx SINE Alu 3 297 -15 1601 152 39 18 chr2 88591649 88591932 -162095922 + AluJo SINE Alu 9 297 -15 2181 115 30 3 chr2 88592066 88592370 -162095484 + AluSq SINE Alu 1 312 -1 1392 170 18 131 chr2 88592841 88592976 -162094878 + AluJo SINE Alu 1 77 -225 2334 84 7 0 chr2 88592976 88593272 -162094582 + AluSp SINE Alu 1 298 -15 1392 170 18 131 chr2 88593272 88593471 -162094383 + AluJo SINE Alu 77 297 -5 2206 126 0 0 chr2 88593491 88593785 -162094069 + AluSq SINE Alu 1 294 -19 2123 88 27 7 chr2 88593816 88594110 -162093744 + AluSx SINE Alu 1 300 -12 1740 133 62 8 chr2 88595036 88595292 -162092562 + AluSx SINE Alu 17 286 -26 1260 164 0 0 chr2 88595438 88595627 -162092227 - AluSx SINE Alu -123 189 1 2414 89 0 0 chr2 88596243 88596535 -162091319 - AluSx SINE Alu -20 292 1 1863 181 0 0 chr2 88597227 88597519 -162090335 - AluJb SINE Alu -18 294 3 2872 13 0 0 chr2 88597676 88597981 -162089873 + AluYa5 SINE Alu 1 305 -6 391 281 116 77 chr2 88597996 88598028 -162089826 + L2 LINE L2 2656 2685 -629 1648 179 17 10 chr2 88598028 88598325 -162089529 - AluJo SINE Alu -13 299 1 391 281 116 77 chr2 88598325 88598390 -162089464 + L2 LINE L2 2685 2746 -568 2263 107 0 7 chr2 88598390 88598688 -162089166 + AluSx SINE Alu 1 296 -16 391 281 116 77 chr2 88598688 88598899 -162088955 + L2 LINE L2 2746 2977 -337 1454 104 0 5 chr2 88599065 88599258 -162088596 + AluY SINE Alu 1 192 -119 542 148 19 46 chr2 88599683 88599791 -162088063 - AluSq/x SINE Alu -207 106 2 2050 153 7 0 chr2 88599833 88600133 -162087721 + AluJb SINE Alu 1 302 -10 347 178 156 0 chr2 88600142 88600232 -162087622 + MER3 DNA MER1_type 52 155 -54 345 247 25 0 chr2 88600282 88600363 -162087491 - MER2 DNA MER2_type -262 83 1 499 198 28 0 chr2 88600627 88600733 -162087121 - FRAM SINE Alu -9 167 59 1962 88 113 14 chr2 88601470 88601754 -162086100 - AluSq SINE Alu -1 312 1 2165 123 0 7 chr2 88601757 88602057 -162085797 - AluSx SINE Alu -14 298 1 638 240 0 8 chr2 88602060 88602185 -162085669 - AluJo/FLAM SINE Alu -177 125 2 242 191 0 95 chr2 88602186 88602249 -162085605 - AluJo SINE Alu -159 143 87 694 229 8 0 chr2 88602397 88602528 -162085326 + FLAM_C SINE Alu 2 133 0 230 264 0 28 chr2 88602875 88602947 -162084907 + (TATG)n Simple_repeat Simple_repeat 3 72 0 225 153 42 0 chr2 88602953 88603025 -162084829 + (TA)n Simple_repeat Simple_repeat 1 75 0 1244 192 5 9 chr2 88603975 88604199 -162083655 - AluJo SINE Alu -7 305 83 2128 138 3 0 chr2 88604316 88604613 -162083241 + AluSq SINE Alu 1 298 -15 2101 130 14 0 chr2 88605371 88605663 -162082191 + AluSq SINE Alu 1 296 -17 2345 81 3 10 chr2 88605712 88606008 -162081846 + AluSq SINE Alu 1 294 -19 2164 80 0 95 chr2 88606350 88606677 -162081177 - AluSg SINE Alu -10 300 5 2096 123 21 0 chr2 88606745 88607029 -162080825 - AluSg SINE Alu -20 290 1 1342 143 4 39 chr2 88607143 88607373 -162080481 + AluJo SINE Alu 1 222 -90 239 175 0 0 chr2 88607396 88607436 -162080418 - Alu SINE Alu -263 40 1 2355 90 0 0 chr2 88607789 88608079 -162079775 - AluY SINE Alu -21 290 1 2200 114 10 0 chr2 88608693 88608990 -162078864 - AluSq SINE Alu -8 305 6 2535 77 0 0 chr2 88609121 88609431 -162078423 - AluSq SINE Alu -3 310 1 851 123 0 0 chr2 88609490 88609612 -162078242 + AluSg/x SINE Alu 177 298 -14 1559 82 5 5 chr2 88609612 88609820 -162078034 - L1PB1 LINE L1 -7 6144 5937 189 0 0 0 chr2 88610088 88610109 -162077745 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2300 99 0 3 chr2 88610656 88610948 -162076906 - AluSg SINE Alu -19 291 1 989 169 12 6 chr2 88610948 88611114 -162076740 - FRAM SINE Alu -10 166 1 2152 90 29 0 chr2 88611365 88611676 -162076178 - AluSq SINE Alu 0 319 1 199 387 75 0 chr2 88611816 88611909 -162075945 - L2 LINE L2 -47 3225 3126 914 169 7 0 chr2 88611912 88612060 -162075794 + FRAM SINE Alu 4 152 -24 2427 87 3 0 chr2 88612083 88612381 -162075473 - AluSx SINE Alu -13 299 1 2101 130 14 0 chr2 88612430 88612722 -162075132 - AluSq SINE Alu -17 296 1 2128 138 3 0 chr2 88613480 88613777 -162074077 - AluSq SINE Alu -15 298 1 1164 195 9 9 chr2 88613894 88614109 -162073745 + AluJo SINE Alu 83 297 -15 289 315 0 0 chr2 88614230 88614322 -162073532 + A-rich Low_complexity Low_complexity 1 92 0 2056 126 10 10 chr2 88614494 88614787 -162073067 + AluSq SINE Alu 2 294 -19 658 167 19 0 chr2 88614790 88614898 -162072956 - AluJo/FLAM SINE Alu -202 110 1 300 286 13 0 chr2 88615027 88615104 -162072750 + L2 LINE L2 3221 3298 -15 2258 107 7 7 chr2 88615577 88615877 -162071977 + AluSq SINE Alu 1 300 -13 945 214 90 23 chr2 88615906 88616172 -162071682 - LTR40b LTR ERVL 0 462 179 334 238 198 0 chr2 88616177 88616278 -162071576 - FLAM_A SINE Alu -12 121 1 754 214 39 6 chr2 88616278 88616456 -162071398 - LTR40b LTR ERVL -273 189 6 904 103 0 29 chr2 88616580 88616716 -162071138 + FLAM_C SINE Alu 2 133 0 2377 75 0 40 chr2 88616843 88617165 -162070689 + AluY SINE Alu 1 309 -2 2506 45 10 0 chr2 88617903 88618195 -162069659 + AluSp SINE Alu 1 295 -18 277 174 0 0 chr2 88618381 88618427 -162069427 + MER69 DNA AcHobo 2 47 -2479 741 212 107 97 chr2 88618457 88618513 -162069341 - L1ME1 LINE L1 -4 6162 6108 2218 82 4 0 chr2 88618513 88618793 -162069061 + AluSq SINE Alu 1 281 -32 504 0 0 0 chr2 88618797 88618853 -162069001 + (CACAC)n Simple_repeat Simple_repeat 5 60 0 741 212 107 97 chr2 88618853 88618888 -162068966 - L1ME1 LINE L1 -60 6106 6073 3422 126 43 17 chr2 88618888 88619307 -162068547 + MER41C LTR ERV1 1 439 -115 2015 137 3 0 chr2 88619307 88619600 -162068254 - AluSx SINE Alu -18 294 1 3422 126 43 17 chr2 88619600 88619720 -162068134 + MER41C LTR ERV1 439 554 0 741 212 107 97 chr2 88619720 88619764 -162068090 - L1ME1 LINE L1 -93 6073 6031 1703 152 57 20 chr2 88619764 88620060 -162067794 + AluJb SINE Alu 1 307 -5 741 212 107 97 chr2 88620060 88620308 -162067546 - L1ME1 LINE L1 -135 6031 5768 1981 86 65 17 chr2 88620313 88620605 -162067249 - AluSg SINE Alu -4 306 1 756 180 8 0 chr2 88620626 88620754 -162067100 - FLAM_C SINE Alu -4 129 1 2529 80 0 0 chr2 88620871 88621183 -162066671 + AluSx SINE Alu 1 312 0 304 306 41 0 chr2 88621344 88621442 -162066412 - MIR SINE MIR -80 182 81 1421 116 134 58 chr2 88623514 88623688 -162064166 - AluJb SINE Alu -5 307 103 2649 45 3 0 chr2 88623688 88623997 -162063857 + AluY SINE Alu 1 310 -1 1421 116 134 58 chr2 88623997 88624097 -162063757 - AluJb SINE Alu -209 103 12 756 199 91 43 chr2 88624103 88624289 -162063565 - MIR SINE MIR -34 228 34 216 274 14 55 chr2 88624322 88624395 -162063459 - L2 LINE L2 -13 3300 3231 2300 110 0 0 chr2 88624432 88624731 -162063123 + AluSx SINE Alu 3 301 -11 2434 82 3 0 chr2 88624764 88625056 -162062798 + AluSx SINE Alu 1 293 -19 258 32 0 0 chr2 88626012 88626043 -162061811 + (T)n Simple_repeat Simple_repeat 1 31 0 243 309 41 21 chr2 88626320 88626417 -162061437 - MER5A DNA MER1_type -56 133 35 * 260 278 14 14 chr2 88626360 88626432 -162061422 + MER5A DNA MER1_type 111 182 -7 1729 125 7 15 chr2 88627702 88627974 -162059880 + AluY SINE Alu 41 310 -1 233 337 250 0 chr2 88629650 88629834 -162058020 - L3 LINE CR1 0 1577 1348 384 359 16 0 chr2 88630063 88630191 -162057663 - MER91A DNA MER1_type -66 130 1 2093 106 7 7 chr2 88630234 88630526 -162057328 + AluSq SINE Alu 2 293 -20 2549 32 0 7 chr2 88630852 88631161 -162056693 + AluY SINE Alu 1 307 -4 24 91 0 0 chr2 88632216 88632282 -162055572 + GC_rich Low_complexity Low_complexity 1 66 0 661 256 110 14 chr2 88633835 88634054 -162053800 - MIR SINE MIR -2 260 21 2201 107 7 0 chr2 88636604 88636904 -162050950 - AluSq SINE Alu -11 302 1 268 222 130 46 chr2 88638427 88638535 -162049319 - MIR SINE MIR -113 149 33 422 252 138 0 chr2 88639716 88639839 -162048015 - MER5B DNA MER1_type -38 140 1 617 120 130 0 chr2 88640385 88640485 -162047369 + FLAM_C SINE Alu 2 114 -29 2195 106 3 3 chr2 88640725 88641026 -162046828 + AluSq SINE Alu 1 301 -12 2231 109 0 0 chr2 88641920 88642224 -162045630 - AluSg SINE Alu -6 304 1 1838 160 13 0 chr2 88642349 88642649 -162045205 + AluJb SINE Alu 1 304 -8 241 313 36 27 chr2 88644156 88644268 -162043586 - L3 LINE CR1 -2 1575 1463 252 228 16 94 chr2 88644291 88644418 -162043436 + L2 LINE L2 3138 3254 -18 2292 103 0 0 chr2 88644788 88645098 -162042756 + AluSx SINE Alu 1 310 -2 180 380 109 0 chr2 88645520 88645612 -162042242 + L2 LINE L2 3168 3269 -3 912 131 0 0 chr2 88645621 88645743 -162042111 - FLAM_C SINE Alu -11 122 1 1317 151 174 8 chr2 88646502 88646767 -162041087 + AluSg1 SINE Alu 1 309 0 619 307 100 0 chr2 88646891 88647122 -162040732 + MIR SINE MIR 8 261 -1 2165 100 14 0 chr2 88647193 88647483 -162040371 + AluSg SINE Alu 1 294 -16 2190 84 0 16 chr2 88647646 88647956 -162039898 - AluY SINE Alu -6 305 1 652 273 34 60 chr2 88648015 88648142 -162039712 - MIR SINE MIR 0 262 133 2053 101 7 3 chr2 88648142 88648451 -162039403 - AluSg SINE Alu 0 310 1 652 273 34 60 chr2 88648451 88648589 -162039265 - MIR SINE MIR -129 133 3 229 337 23 0 chr2 88648776 88648862 -162038992 + L2 LINE L2 3226 3313 0 213 258 15 30 chr2 88648868 88648934 -162038920 + GA-rich Low_complexity Low_complexity 2 66 0 648 209 135 0 chr2 88649832 88649995 -162037859 - MIR SINE MIR -70 192 8 31 44 0 0 chr2 88650339 88650384 -162037470 + GC_rich Low_complexity Low_complexity 1 45 0 303 327 73 0 chr2 88650597 88650707 -162037147 - L2 LINE L2 0 3313 3196 511 219 42 0 chr2 88650734 88650853 -162037001 + L1MB5 LINE L1 6050 6173 -1 853 147 0 22 chr2 88651143 88651279 -162036575 - FLAM_C SINE Alu 0 133 1 1934 153 0 0 chr2 88651496 88651796 -162036058 + AluJo SINE Alu 3 302 -10 2121 93 28 0 chr2 88653259 88653548 -162034306 - AluSx SINE Alu -15 297 1 411 136 0 0 chr2 88653548 88653614 -162034240 - Alu SINE Alu -13 299 234 2241 75 3 7 chr2 88653716 88654009 -162033845 + AluSq SINE Alu 17 308 -5 493 191 0 0 chr2 88654009 88654098 -162033756 - MER115 DNA AcHobo -117 576 488 262 301 34 18 chr2 88654137 88654322 -162033532 - MER115 DNA AcHobo -358 335 64 1837 138 17 3 chr2 88654419 88654710 -162033144 + AluSx SINE Alu 3 297 -15 805 95 0 26 chr2 88657357 88657473 -162030381 - FLAM_C SINE Alu -2 141 29 2204 103 0 6 chr2 88657797 88658108 -162029746 + AluSg SINE Alu 1 309 -1 1686 173 6 16 chr2 88658463 88658776 -162029078 - AluJo SINE Alu 0 312 3 2139 81 10 13 chr2 88658786 88659084 -162028770 - AluSq SINE Alu -16 297 1 1651 177 7 10 chr2 88659131 88659431 -162028423 - AluJo SINE Alu -12 300 2 884 178 0 93 chr2 88659445 88659498 -162028356 + AluJo SINE Alu 87 143 -169 1964 142 3 0 chr2 88659498 88659837 -162028017 + AluSx SINE Alu 5 312 0 2208 105 3 6 chr2 88659839 88660152 -162027702 + AluSp SINE Alu 1 312 -1 884 178 0 93 chr2 88660152 88660309 -162027545 + AluJo SINE Alu 144 280 -32 273 97 53 114 chr2 88660326 88660416 -162027438 + Charlie5 DNA MER1_type 2410 2493 -92 2144 111 7 0 chr2 88660416 88660722 -162027132 + AluSg SINE Alu 1 308 -2 273 97 53 114 chr2 88660722 88660745 -162027109 + Charlie5 DNA MER1_type 2493 2516 -69 885 226 12 0 chr2 88660759 88660923 -162026931 - FRAM SINE Alu 0 166 1 209 258 0 16 chr2 88661043 88661105 -162026749 + MIR SINE MIR 73 133 -129 807 136 0 0 chr2 88661137 88661247 -162026607 + AluJo/FLAM SINE Alu 3 112 -200 2278 102 0 6 chr2 88661247 88661561 -162026293 - AluSq SINE Alu -1 312 1 1761 157 3 29 chr2 88662033 88662345 -162025509 + AluSx SINE Alu 1 304 -8 2099 123 10 0 chr2 88662345 88662655 -162025199 + AluSq SINE Alu 1 313 0 2240 113 0 0 chr2 88663045 88663356 -162024498 - AluY SINE Alu 0 311 1 1145 177 28 9 chr2 88663406 88663621 -162024233 + MER20 DNA MER1_type 1 219 0 188 299 136 86 chr2 88663644 88664099 -162023755 + L2 LINE L2 2195 2672 -642 2369 84 0 0 chr2 88664812 88665120 -162022734 - AluSg1 SINE Alu -1 308 1 727 183 0 0 chr2 88665187 88665313 -162022541 + AluJo/FLAM SINE Alu 1 126 -186 2086 99 0 7 chr2 88665316 88665620 -162022234 - AluSc SINE Alu 0 302 1 230 54 0 27 chr2 88665621 88665658 -162022196 + (TTTTA)n Simple_repeat Simple_repeat 1 36 0 1960 138 0 0 chr2 88665658 88665940 -162021914 - AluSx SINE Alu -30 282 1 25 0 0 0 chr2 88665940 88665965 -162021889 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 88666163 88666191 -162021663 + AT_rich Low_complexity Low_complexity 1 28 0 1803 156 30 0 chr2 88666412 88666707 -162021147 + AluJb SINE Alu 1 304 -8 2221 127 0 0 chr2 88666707 88667021 -162020833 + 7SLRNA srpRNA srpRNA 1 314 -6 2235 99 0 0 chr2 88667026 88667320 -162020534 + AluSx SINE Alu 3 296 -16 1650 188 34 46 chr2 88667490 88667734 -162020120 + Charlie1a DNA MER1_type 33 271 -2490 2106 97 10 3 chr2 88667734 88668032 -162019822 + AluSx SINE Alu 1 300 -12 1650 188 34 46 chr2 88668032 88668197 -162019657 + Charlie1a DNA MER1_type 271 437 -1018 1876 134 20 0 chr2 88668209 88668501 -162019353 + AluSx SINE Alu 1 298 -14 1458 124 74 150 chr2 88668505 88668583 -162019271 - L1MC2 LINE L1 -3 6341 6259 1899 141 3 6 chr2 88668583 88668896 -162018958 + AluJb SINE Alu 1 312 0 1458 124 74 150 chr2 88668896 88669028 -162018826 - L1MC2 LINE L1 -85 6259 6119 2320 82 0 3 chr2 88669028 88669334 -162018520 + AluSq SINE Alu 1 305 -8 1458 124 74 150 chr2 88669334 88669582 -162018272 - L1MC2 LINE L1 -225 6119 5917 735 176 24 0 chr2 88669583 88669708 -162018146 + FLAM_C SINE Alu 2 129 -14 568 152 19 0 chr2 88669715 88669820 -162018034 - L1MC2 LINE L1 -413 5931 5825 501 243 10 0 chr2 88669823 88669926 -162017928 - FLAM_A SINE Alu -14 128 25 2236 92 0 0 chr2 88669981 88670275 -162017579 - AluSg SINE Alu -16 294 1 2189 108 0 10 chr2 88670275 88670582 -162017272 - AluSx SINE Alu -8 304 1 2362 58 0 0 chr2 88670595 88670887 -162016967 - AluY SINE Alu -19 292 1 583 139 26 0 chr2 88670892 88671007 -162016847 + Charlie1 DNA MER1_type 2643 2760 -1 2316 84 7 0 chr2 88671220 88671530 -162016324 - AluSx SINE Alu 0 312 1 1279 167 83 21 chr2 88671530 88671817 -162016037 - AluJo SINE Alu -6 306 1 2234 67 0 51 chr2 88673168 88673482 -162014372 - AluSq SINE Alu -15 298 1 1130 184 18 36 chr2 88673695 88673918 -162013936 + MER20 DNA MER1_type 1 219 0 2235 77 0 7 chr2 88674043 88674356 -162013498 - AluSp SINE Alu 0 311 1 215 288 82 14 chr2 88674582 88674655 -162013199 - MIR SINE MIR -184 78 1 24 32 0 0 chr2 88675029 88675060 -162012794 + AT_rich Low_complexity Low_complexity 1 31 0 565 320 136 10 chr2 88675618 88675927 -162011927 + L3 LINE CR1 1214 1561 -16 192 97 0 0 chr2 88676008 88676039 -162011815 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 899 93 0 0 chr2 88676044 88676162 -162011692 - FLAM_C SINE Alu -25 118 1 1285 178 0 10 chr2 88676293 88676501 -162011353 - AluJo SINE Alu -24 288 83 509 258 88 50 chr2 88676535 88676642 -162011212 - MIR SINE MIR 0 262 160 810 256 0 0 chr2 88676642 88676802 -162011052 - FRAM SINE Alu -6 160 1 509 258 88 50 chr2 88676802 88676934 -162010920 - MIR SINE MIR -102 160 14 204 291 63 47 chr2 88677810 88677937 -162009917 + L2 LINE L2 3179 3307 -6 342 139 40 148 chr2 88678025 88678126 -162009728 - LTR23 LTR ERV1 -28 409 320 1799 156 14 21 chr2 88679019 88679332 -162008522 + AluJo SINE Alu 1 311 0 2368 88 7 3 chr2 88679886 88680183 -162007671 + AluSx SINE Alu 1 298 -14 522 223 91 25 chr2 88682340 88682461 -162005393 + FLAM_C SINE Alu 3 131 -2 2099 113 20 0 chr2 88684126 88684418 -162003436 + AluSx SINE Alu 1 298 -14 255 317 30 30 chr2 88684534 88684635 -162003219 - MIR SINE MIR -149 113 13 276 346 131 44 chr2 88685303 88685579 -162002275 + L2 LINE L2 2244 2549 -765 1944 159 7 0 chr2 88685579 88685869 -162001985 - AluSx SINE Alu -20 292 1 276 346 131 44 chr2 88685869 88685890 -162001964 + L2 LINE L2 2549 2567 -747 1855 118 55 0 chr2 88687078 88687349 -162000505 - AluSx SINE Alu -24 288 3 1565 105 139 4 chr2 88687360 88687598 -162000256 - AluY SINE Alu -21 290 21 648 230 29 22 chr2 88688326 88688465 -161999389 - FRAM SINE Alu -24 152 13 228 163 0 41 chr2 88694184 88694233 -161993621 + G-rich Low_complexity Low_complexity 1 47 0 34 42 0 0 chr2 88694656 88694704 -161993150 + GC_rich Low_complexity Low_complexity 1 48 0 497 211 86 16 chr2 88696596 88696724 -161991130 + MIR SINE MIR 98 234 -28 293 336 69 9 chr2 88696772 88696888 -161990966 + L2 LINE L2 2739 2861 -453 282 303 97 34 chr2 88697194 88697369 -161990485 + L2 LINE L2 3112 3297 -16 2440 65 0 3 chr2 88697437 88697728 -161990126 + AluY SINE Alu 1 290 -21 317 263 325 6 chr2 88698628 88698788 -161989066 - MIR SINE MIR -32 230 20 250 221 15 15 chr2 88699021 88699089 -161988765 + L1M LINE L1 5338 5405 -765 1527 126 12 24 chr2 88699117 88699372 -161988482 + MER21A LTR ERV1 13 264 -667 796 145 23 203 chr2 88699360 88699630 -161988224 + MER21A LTR ERV1 386 595 -336 * 2162 107 10 0 chr2 88699630 88699921 -161987933 - AluSq SINE Alu -18 295 2 796 145 23 203 chr2 88699921 88699960 -161987894 + MER21A LTR ERV1 595 639 -292 2224 86 17 17 chr2 88700305 88700596 -161987258 + AluSx SINE Alu 1 291 -21 2134 112 10 3 chr2 88700684 88700972 -161986882 + AluSq SINE Alu 3 295 -18 186 43 0 0 chr2 88700972 88700995 -161986859 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 2337 103 7 3 chr2 88701025 88701335 -161986519 + AluSq SINE Alu 1 311 -2 2100 132 0 3 chr2 88701347 88701635 -161986219 - AluSx SINE Alu -25 287 1 1623 180 74 0 chr2 88701917 88702200 -161985654 - AluJb SINE Alu -8 304 1 2572 54 0 0 chr2 88702739 88703033 -161984821 - AluY SINE Alu -17 294 1 2035 134 10 10 chr2 88703038 88703330 -161984524 - AluSx SINE Alu -20 292 1 649 158 48 14 chr2 88703339 88703485 -161984369 + L1MB7 LINE L1 5086 5236 -910 3980 135 16 41 chr2 88703492 88703854 -161984000 + L1MB7 LINE L1 5490 5860 -324 2184 98 3 7 chr2 88703854 88704149 -161983705 - AluSx SINE Alu -18 294 1 3980 135 16 41 chr2 88704149 88704241 -161983613 + L1MB7 LINE L1 5860 5953 -231 1998 144 3 3 chr2 88704241 88704532 -161983322 + AluJb SINE Alu 1 291 -21 3980 135 16 41 chr2 88704532 88704785 -161983069 + L1MB7 LINE L1 5953 6180 -4 25 31 0 0 chr2 88704859 88704891 -161982963 + AT_rich Low_complexity Low_complexity 1 32 0 287 327 59 33 chr2 88704932 88705235 -161982619 - L1ME LINE L1 -250 5871 5561 1414 266 100 24 chr2 88705566 88706279 -161981575 + L1MC4a LINE L1 5322 6086 -35 24 38 0 38 chr2 88706296 88706329 -161981525 + AT_rich Low_complexity Low_complexity 1 33 -18 2452 75 0 0 chr2 88706329 88706621 -161981233 - AluSp SINE Alu -20 293 2 24 38 0 38 chr2 88706621 88706640 -161981214 + AT_rich Low_complexity Low_complexity 33 51 0 181 316 64 102 chr2 88706812 88707147 -161980707 - L2 LINE L2 -645 2669 2323 2259 104 3 7 chr2 88707147 88707454 -161980400 + AluSx SINE Alu 1 306 -6 181 316 64 102 chr2 88707454 88707468 -161980386 - L2 LINE L2 -991 2323 2310 2415 94 7 0 chr2 88707468 88707777 -161980077 + AluSp SINE Alu 3 313 0 181 316 64 102 chr2 88707777 88708096 -161979758 - L2 LINE L2 -1004 2310 2025 1106 147 6 12 chr2 88708128 88708298 -161979556 - AluJo SINE Alu -143 169 1 236 254 53 53 chr2 88709982 88710096 -161977758 + L2 LINE L2 2931 3044 -228 250 243 176 0 chr2 88710104 88710178 -161977676 + MIR SINE MIR 2 88 -174 5010 76 23 18 chr2 88710278 88711174 -161976680 + SVA Other Other 140 866 -520 6704 70 19 39 chr2 88711191 88712165 -161975689 + SVA Other Other 433 1386 0 517 167 14 94 chr2 88712198 88712258 -161975596 + LTR49-int LTR ERV1 3146 3190 -3141 2188 135 3 19 chr2 88712258 88712576 -161975278 - AluSq SINE Alu 0 313 1 517 167 14 94 chr2 88712576 88712653 -161975201 + LTR49-int LTR ERV1 3190 3272 -3059 325 200 0 0 chr2 88712713 88712773 -161975081 + LTR49-int LTR ERV1 3275 3334 -2997 464 194 20 0 chr2 88712836 88712934 -161974920 + LTR49-int LTR ERV1 3348 3447 -2884 234 211 31 156 chr2 88713204 88713332 -161974522 + MIR SINE MIR 127 238 -24 3180 147 15 37 chr2 88713359 88713775 -161974079 + MER1A DNA MER1_type 3 406 -2294 2198 105 3 22 chr2 88713775 88714089 -161973765 + AluSc SINE Alu 1 308 -1 3180 147 15 37 chr2 88714089 88714209 -161973645 + MER1A DNA MER1_type 406 527 0 933 94 23 8 chr2 88714234 88714362 -161973492 + AluJo SINE Alu 5 134 -178 1960 107 71 4 chr2 88714516 88714797 -161973057 - AluSq SINE Alu -13 300 1 2194 133 7 0 chr2 88714824 88715126 -161972728 + AluSx SINE Alu 1 304 -8 22 0 0 0 chr2 88715346 88715368 -161972486 + AT_rich Low_complexity Low_complexity 1 22 0 426 239 134 84 chr2 88715579 88715770 -161972084 - L1ME3A LINE L1 -223 5947 5767 2127 126 3 7 chr2 88715770 88716072 -161971782 - AluJb SINE Alu -11 301 1 426 239 134 84 chr2 88716072 88716109 -161971745 - L1ME3A LINE L1 -403 5767 5733 2411 94 3 0 chr2 88716109 88716417 -161971437 - AluSg SINE Alu -1 309 1 426 239 134 84 chr2 88716417 88716522 -161971332 - L1ME3A LINE L1 -437 5733 5596 1749 157 33 20 chr2 88716989 88717288 -161970566 + AluSx SINE Alu 1 303 -9 1962 166 13 0 chr2 88717734 88718036 -161969818 + AluSx SINE Alu 1 306 -6 2285 116 3 0 chr2 88718338 88718648 -161969206 + AluSx SINE Alu 1 311 -1 2289 116 7 0 chr2 88719028 88719338 -161968516 - AluSx SINE Alu 0 312 1 486 257 53 56 chr2 88720611 88720895 -161966959 - L1MC4 LINE L1 -143 7899 7617 351 0 0 0 chr2 88720979 88721018 -161966836 + (TG)n Simple_repeat Simple_repeat 2 40 0 268 211 26 66 chr2 88722349 88722425 -161965429 + MIR SINE MIR 76 148 -114 435 301 35 26 chr2 88722429 88722542 -161965312 - L2 LINE L2 -4 3268 3155 264 184 20 0 chr2 88722596 88722645 -161965209 + MIR SINE MIR 148 197 -65 2076 101 57 17 chr2 88722916 88723214 -161964640 + AluSq SINE Alu 1 310 -3 1734 173 3 20 chr2 88723501 88723801 -161964053 + AluJo SINE Alu 1 295 -17 2246 123 0 3 chr2 88724440 88724749 -161963105 + AluSq SINE Alu 1 308 -5 2177 126 0 0 chr2 88724750 88725044 -161962810 + AluSx SINE Alu 2 295 -17 825 178 0 0 chr2 88725262 88725391 -161962463 + FLAM_A SINE Alu 1 129 -4 620 238 41 78 chr2 88725565 88725659 -161962195 - L1ME3A LINE L1 -233 5937 5841 1802 126 65 4 chr2 88725659 88725921 -161961933 + AluSx SINE Alu 1 278 -34 186 43 0 0 chr2 88725928 88725951 -161961903 + (CA)n Simple_repeat Simple_repeat 1 23 0 620 238 41 78 chr2 88725951 88726117 -161961737 - L1ME3A LINE L1 -335 5835 5679 322 320 83 44 chr2 88726891 88727072 -161960782 + HAL1 LINE L1 370 557 -1950 2148 134 7 0 chr2 88727072 88727377 -161960477 + AluSx SINE Alu 1 307 -5 354 198 45 27 chr2 88727383 88727494 -161960360 + L1ME LINE L1 5703 5815 -349 2054 106 3 13 chr2 88727694 88727996 -161959858 - AluSx SINE Alu -13 299 1 2071 105 0 3 chr2 88728392 88728678 -161959176 + AluSx SINE Alu 11 295 -17 2233 96 0 10 chr2 88729560 88729872 -161957982 + AluSx SINE Alu 1 309 -3 38 0 0 0 chr2 88729872 88729910 -161957944 + AT_rich Low_complexity Low_complexity 1 38 0 533 234 16 8 chr2 88729974 88730098 -161957756 - LTR33 LTR ERVL 0 521 397 578 259 75 30 chr2 88730205 88730406 -161957448 - LTR33 LTR ERVL -311 210 1 1987 104 0 11 chr2 88730457 88730736 -161957118 + AluSx SINE Alu 1 276 -36 201 74 0 0 chr2 88730737 88730764 -161957090 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 188 62 31 0 chr2 88730764 88730771 -161957083 + (TAA)n Simple_repeat Simple_repeat 2 7 -27 1751 161 3 0 chr2 88730771 88731056 -161956798 + AluSx SINE Alu 1 286 -26 188 62 31 0 chr2 88731056 88731080 -161956774 + (TAA)n Simple_repeat Simple_repeat 7 34 0 471 149 35 0 chr2 88731085 88731172 -161956682 + L1MA9 LINE L1 6167 6256 -56 1690 152 10 3 chr2 88731174 88731463 -161956391 + AluJb SINE Alu 7 297 -15 2316 99 0 0 chr2 88731467 88731779 -161956075 + AluSq SINE Alu 1 312 -1 386 178 0 0 chr2 88731804 88731877 -161955977 + L1MA9 LINE L1 6240 6312 0 886 29 0 0 chr2 88732962 88733066 -161954788 + AluSc SINE Alu 1 104 -205 1824 95 24 0 chr2 88733069 88733384 -161954470 + AluSx SINE Alu 23 343 0 2118 84 3 3 chr2 88733384 88733729 -161954125 + AluY SINE Alu 1 311 0 777 233 25 65 chr2 88733755 88734000 -161953854 + L2 LINE L2 2918 3152 -161 530 175 84 24 chr2 88734013 88734026 -161953828 - AluSc SINE Alu -5 304 293 1930 126 0 98 chr2 88734026 88734318 -161953536 - L1MB3 LINE L1 -4 6179 5937 2166 86 31 0 chr2 88734318 88734610 -161953244 - AluSx SINE Alu -11 301 1 1930 126 0 98 chr2 88734610 88734723 -161953131 - L1MB3 LINE L1 -246 5937 5814 530 175 84 24 chr2 88734723 88734875 -161952979 - AluSc SINE Alu -16 293 129 234 111 0 0 chr2 88734990 88735026 -161952828 + Alu SINE Alu 259 294 -8 249 277 125 45 chr2 88735034 88735146 -161952708 - MER34C LTR ERV1 -173 412 292 2255 96 3 0 chr2 88735147 88735449 -161952405 - AluSq SINE Alu -10 303 1 1878 146 0 0 chr2 88735450 88735745 -161952109 - AluSx SINE Alu -17 295 1 2487 168 7 98 chr2 88735745 88735826 -161952028 - MER57-int LTR ERV1 -6806 731 644 11662 22 0 0 chr2 88735826 88737921 -161949933 - L1PA2 LINE L1 0 6155 4058 2487 168 7 98 chr2 88737921 88738400 -161949454 - MER57-int LTR ERV1 -6893 644 222 2050 109 20 0 chr2 88738401 88738694 -161949160 - AluY SINE Alu -12 299 1 617 165 0 0 chr2 88738717 88738808 -161949046 - AluJ/FLAM SINE Alu -213 99 9 22 56 0 0 chr2 88738835 88738871 -161948983 + AT_rich Low_complexity Low_complexity 1 36 0 395 98 0 0 chr2 88739067 88739118 -161948736 + AluSq SINE Alu 1 51 -250 1517 95 5 5 chr2 88739118 88739328 -161948526 + AluSq SINE Alu 92 301 -12 733 203 0 44 chr2 88739758 88739916 -161947938 + Charlie1 DNA MER1_type 41 191 -2570 2086 117 0 3 chr2 88739916 88740214 -161947640 - AluSx SINE Alu -15 297 1 307 122 68 14 chr2 88740225 88740299 -161947555 + Charlie1 DNA MER1_type 2572 2649 -112 824 171 0 0 chr2 88740309 88740438 -161947416 - FLAM_A SINE Alu -4 129 1 2145 112 0 0 chr2 88740450 88740746 -161947108 - AluSx SINE Alu -16 296 1 907 134 6 25 chr2 88740755 88740912 -161946942 - FRAM SINE Alu -23 153 1 870 249 71 66 chr2 88740973 88741124 -161946730 + L1ME3A LINE L1 5255 5404 -766 1503 189 129 43 chr2 88741124 88741367 -161946487 - MLT1D LTR MaLR 0 505 284 1951 135 0 23 chr2 88741367 88741671 -161946183 - AluSx SINE Alu -15 297 1 1503 189 129 43 chr2 88741671 88741892 -161945962 - MLT1D LTR MaLR -221 284 1 870 249 71 66 chr2 88741892 88742133 -161945721 + L1ME3A LINE L1 5404 5649 -521 1255 73 0 12 chr2 88742141 88742306 -161945548 - AluSq SINE Alu -150 163 1 1781 246 12 8 chr2 88742316 88742715 -161945139 + MLT1G LTR MaLR 190 590 0 777 235 39 15 chr2 88742715 88742919 -161944935 + L1ME3A LINE L1 5646 5854 -316 662 180 180 6 chr2 88742915 88743098 -161944756 - L1ME3A LINE L1 -21 6149 5935 * 1865 140 3 14 chr2 88743277 88743600 -161944254 - AluSx SINE Alu 0 320 1 247 222 14 14 chr2 88743646 88743718 -161944136 - L1ME3A LINE L1 -3 6167 6096 548 207 72 0 chr2 88744089 88744200 -161943654 + FLAM_C SINE Alu 2 120 -23 236 28 56 0 chr2 88744200 88744236 -161943618 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 412 214 42 24 chr2 88744396 88744526 -161943328 + LTR43 LTR ERV1 189 472 -207 289 156 0 0 chr2 88744987 88745032 -161942822 - Alu SINE Alu -13 289 245 1346 171 36 47 chr2 88745032 88745307 -161942547 - AluJo SINE Alu -40 272 1 2557 167 52 6 chr2 88745316 88745800 -161942054 - L1MB3 LINE L1 -40 6143 5638 373 137 0 68 chr2 88745800 88745873 -161941981 + MLT1F1 LTR MaLR 500 567 0 2163 106 3 13 chr2 88746070 88746382 -161941472 + AluSp SINE Alu 1 309 -4 207 0 0 0 chr2 88746400 88746423 -161941431 + (T)n Simple_repeat Simple_repeat 1 23 0 366 254 156 64 chr2 88747002 88747089 -161940765 + L1ME4a LINE L1 5818 5896 -225 1905 151 0 0 chr2 88747089 88747387 -161940467 + AluSx SINE Alu 1 298 -14 366 254 156 64 chr2 88747387 88747472 -161940382 + L1ME4a LINE L1 5896 6006 -115 1825 158 92 48 chr2 88747567 88747946 -161939908 + MSTD LTR MaLR 1 396 0 2745 129 11 25 chr2 88748075 88748509 -161939345 + MSTA LTR MaLR 1 428 0 576 206 0 10 chr2 88748511 88748613 -161939241 + Tigger3(Golem) DNA MER2_type 1 101 -2928 * 654 81 0 0 chr2 88748610 88748697 -161939157 + Tigger3(Golem) DNA MER2_type 2251 2337 -692 716 185 116 23 chr2 88748697 88748870 -161938984 - AluJo SINE Alu -3 309 121 1434 185 53 20 chr2 88748896 88749198 -161938656 + AluJb SINE Alu 1 312 0 1530 177 0 42 chr2 88749203 88749514 -161938340 + AluJo SINE Alu 1 298 -14 2313 82 3 0 chr2 88749514 88749820 -161938034 + AluSg SINE Alu 1 307 -3 703 94 0 8 chr2 88749821 88749938 -161937916 + Tigger3(Golem) DNA MER2_type 2394 2509 -520 2175 89 0 3 chr2 88749938 88750231 -161937623 + AluSg1 SINE Alu 1 292 -17 2106 122 3 0 chr2 88750237 88750541 -161937313 + AluSx SINE Alu 1 305 -7 315 234 58 15 chr2 88750635 88750772 -161937082 + HAL1b LINE L1 1172 1314 -34 2176 91 3 23 chr2 88751356 88751665 -161936189 + AluSx SINE Alu 1 303 -9 470 297 87 35 chr2 88751759 88752045 -161935809 - L1MC/D LINE L1 -459 5662 5483 2238 102 0 0 chr2 88752181 88752475 -161935379 + AluSg SINE Alu 1 294 -16 2093 128 0 0 chr2 88752475 88752773 -161935081 + AluSq SINE Alu 1 298 -15 225 0 0 0 chr2 88752928 88752953 -161934901 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 816 143 0 24 chr2 88752960 88753086 -161934768 - FLAM_C SINE Alu -19 124 2 1694 140 26 19 chr2 88753097 88753314 -161934540 - AluSx SINE Alu 0 356 135 1884 126 6 31 chr2 88753314 88753631 -161934223 - AluSx SINE Alu -1 311 3 1694 140 26 19 chr2 88753631 88753764 -161934090 - AluSx SINE Alu -221 135 4 2026 120 0 0 chr2 88753926 88754251 -161933603 - AluSx SINE Alu 0 325 1 829 65 37 0 chr2 88754344 88754452 -161933402 + HY1 scRNA scRNA 1 112 0 1982 247 76 73 chr2 88754479 88754967 -161932887 - HAL1 LINE L1 -1682 825 333 2237 93 7 0 chr2 88754967 88755269 -161932585 - AluSx SINE Alu -8 304 1 1982 247 76 73 chr2 88755269 88755560 -161932294 - HAL1 LINE L1 -2174 333 44 783 162 0 0 chr2 88756670 88756787 -161931067 + AluJo SINE Alu 1 117 -185 23 0 0 0 chr2 88756787 88756810 -161931044 + AT_rich Low_complexity Low_complexity 1 23 0 1397 101 13 26 chr2 88756810 88757037 -161930817 - AluSg/x SINE Alu -15 297 74 799 166 149 29 chr2 88757060 88757235 -161930619 + AluJo SINE Alu 104 299 -13 180 313 119 0 chr2 88757544 88757611 -161930243 - MIR SINE MIR -67 195 121 320 138 213 62 chr2 88757639 88757719 -161930135 + MER5A DNA MER1_type 9 100 -89 273 211 0 0 chr2 88758795 88758847 -161929007 + LTR30 LTR ERV1 1 52 -670 1231 150 39 56 chr2 88758848 88759081 -161928773 + LTR12 LTR ERV1 54 282 -432 392 209 11 0 chr2 88759088 88759179 -161928675 + LTR30 LTR ERV1 552 643 -79 699 129 0 0 chr2 88759180 88759281 -161928573 + LTR12 LTR ERV1 481 581 -133 1927 114 0 11 chr2 88759521 88759676 -161928178 - L1M3 LINE L1 -370 5813 5661 2181 99 0 0 chr2 88759676 88759969 -161927885 - AluSg SINE Alu -17 293 1 1927 114 0 11 chr2 88759969 88760093 -161927761 - L1M3 LINE L1 -522 5661 5537 325 211 224 79 chr2 88760093 88760245 -161927609 + L2 LINE L2 3139 3312 -1 302 269 65 0 chr2 88760629 88760737 -161927117 + MIR3 SINE MIR 76 190 -18 408 279 174 21 chr2 88761403 88761593 -161926261 - L1ME4a LINE L1 -83 6038 5820 217 362 67 38 chr2 88761643 88761748 -161926106 - L2 LINE L2 -44 3228 3121 186 294 101 18 chr2 88761998 88762107 -161925747 - MIR SINE MIR -59 149 32 237 242 121 0 chr2 88762411 88762477 -161925377 + L2 LINE L2 3234 3307 -6 1004 191 21 0 chr2 88762584 88762772 -161925082 - AluJb SINE Alu 0 312 121 200 336 27 18 chr2 88762977 88763087 -161924767 - MIR3 SINE MIR -6 202 92 431 258 217 8 chr2 88763151 88763391 -161924463 - L2 LINE L2 0 3313 3024 811 223 6 0 chr2 88763394 88763569 -161924285 + FRAM SINE Alu 1 40 0 390 272 130 15 chr2 88763595 88763790 -161924064 - L2 LINE L2 -292 2980 2766 244 204 0 0 chr2 88764911 88764965 -161922889 + (TG)n Simple_repeat Simple_repeat 1 54 0 305 311 55 55 chr2 88765010 88765245 -161922609 + MIR SINE MIR 20 254 -8 789 183 0 0 chr2 88765657 88765783 -161922071 - AluJo SINE Alu -53 259 134 2050 107 21 0 chr2 88765783 88766073 -161921781 - AluSp SINE Alu -17 296 1 23 0 0 0 chr2 88766078 88766101 -161921753 + AT_rich Low_complexity Low_complexity 1 23 0 806 160 8 8 chr2 88766123 88766254 -161921600 - AluJo SINE Alu -180 132 2 738 263 86 22 chr2 88766309 88766504 -161921350 - MIR SINE MIR 0 262 48 1141 209 155 75 chr2 88766504 88766987 -161920867 + LTR33A LTR ERVL 1 522 -1 738 263 86 22 chr2 88766987 88767023 -161920831 - MIR SINE MIR -214 48 16 206 229 115 0 chr2 88767023 88767084 -161920770 - MIR SINE MIR -123 139 72 242 309 21 0 chr2 88767143 88767240 -161920614 + L1 LINE L1 4733 4831 -1315 2221 99 3 0 chr2 88768033 88768337 -161919517 - AluSp SINE Alu -8 305 1 1951 149 88 40 chr2 88768346 88768359 -161919495 - MER57A LTR ERV1 0 402 391 1963 96 64 0 chr2 88768359 88768639 -161919215 - AluSx SINE Alu -14 298 1 1951 149 88 40 chr2 88768639 88768780 -161919074 - MER57A LTR ERV1 -11 391 258 1564 182 0 14 chr2 88768780 88769104 -161918750 + AluJb SINE Alu 1 312 0 1951 149 88 40 chr2 88769104 88769127 -161918727 - MER57A LTR ERV1 -144 258 238 1993 121 3 17 chr2 88769127 88769450 -161918404 + AluSx SINE Alu 1 312 0 1951 149 88 40 chr2 88769450 88769660 -161918194 - MER57A LTR ERV1 -164 238 1 674 247 24 12 chr2 88769660 88769830 -161918024 - MER57A-int LTR ERV1 0 7537 7366 684 141 74 61 chr2 88769830 88770055 -161917799 - LTR54B LTR ERV1 -271 239 1 2541 186 19 8 chr2 88770055 88770523 -161917331 - MER57A-int LTR ERV1 -393 7144 6672 722 164 9 0 chr2 88770523 88770633 -161917221 + FLAM_C SINE Alu 2 112 -31 518 0 16 0 chr2 88770633 88770695 -161917159 + (TC)n Simple_repeat Simple_repeat 2 64 0 213 39 0 0 chr2 88770695 88770721 -161917133 + (TG)n Simple_repeat Simple_repeat 2 27 0 4739 173 33 9 chr2 88770731 88771581 -161916273 - MER57A-int LTR ERV1 -479 6682 5825 207 0 0 0 chr2 88771635 88771658 -161916196 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1998 98 4 0 chr2 88771687 88771961 -161915893 - AluSx SINE Alu -32 280 6 2877 148 29 53 chr2 88772207 88772454 -161915400 - MER57A-int LTR ERV1 -1686 5851 5599 257 0 30 0 chr2 88772454 88772487 -161915367 + (CA)n Simple_repeat Simple_repeat 1 34 0 2877 148 29 53 chr2 88772487 88772690 -161915164 - MER57A-int LTR ERV1 -1938 5599 5415 1441 172 28 14 chr2 88772690 88772980 -161914874 + AluJb SINE Alu 1 294 -18 2877 148 29 53 chr2 88772980 88773090 -161914764 - MER57A-int LTR ERV1 -2122 5415 5304 1404 156 122 11 chr2 88773091 88773354 -161914500 + AluSg SINE Alu 1 292 -18 3172 151 51 100 chr2 88773357 88773622 -161914232 - MER57A-int LTR ERV1 -1720 4611 4335 1978 113 0 10 chr2 88773622 88773935 -161913919 - AluSq SINE Alu 0 313 6 1680 153 36 0 chr2 88773940 88774241 -161913613 - AluJb SINE Alu 0 312 1 3172 151 51 100 chr2 88774241 88774298 -161913556 - MER57A-int LTR ERV1 -2000 4331 4273 2193 112 3 0 chr2 88774298 88774610 -161913244 + AluSp SINE Alu 1 313 0 3172 151 51 100 chr2 88774610 88774814 -161913040 - MER57A-int LTR ERV1 -2058 4273 4061 1674 137 74 0 chr2 88774814 88775099 -161912755 + AluSg SINE Alu 1 306 -4 3172 151 51 100 chr2 88775099 88775336 -161912518 - MER57A-int LTR ERV1 -2270 4061 3884 1982 118 38 0 chr2 88775336 88775625 -161912229 + AluSx SINE Alu 1 300 -12 3172 151 51 100 chr2 88775625 88775715 -161912139 - MER57A-int LTR ERV1 -2447 3884 3791 2407 68 0 0 chr2 88775775 88776070 -161911784 - AluSp SINE Alu -18 295 1 736 197 0 29 chr2 88776075 88776212 -161911642 - FLAM_C SINE Alu 0 133 1 358 191 45 22 chr2 88777195 88777284 -161910570 - MER57A-int LTR ERV1 -2244 3702 3612 1516 180 3 43 chr2 88777367 88777513 -161910341 + AluJb SINE Alu 1 130 -182 1974 119 19 16 chr2 88777513 88777824 -161910030 + AluSp SINE Alu 1 312 -1 802 206 9 73 chr2 88777759 88777977 -161909877 + AluJb SINE Alu 85 288 -24 1516 180 3 43 chr2 88777824 88777977 -161909877 + AluJb SINE Alu 130 288 -24 965 140 132 35 chr2 88778290 88778547 -161909307 + LTR12 LTR ERV1 1 282 -432 363 245 23 0 chr2 88778526 88778644 -161909210 + LTR30 LTR ERV1 552 643 -79 * 671 129 0 0 chr2 88778645 88778746 -161909108 + LTR12 LTR ERV1 481 581 -133 1021 170 0 0 chr2 88778884 88779049 -161908805 - AluJb SINE Alu -14 298 134 2231 103 0 0 chr2 88779049 88779350 -161908504 - AluSg SINE Alu -9 301 1 239 285 73 46 chr2 88779596 88779755 -161908099 + MIR SINE MIR 45 197 -11 * 326 273 19 84 chr2 88779725 88779757 -161908097 - L2 LINE L2 -2 3311 3278 2447 146 22 22 chr2 88779757 88779794 -161908060 + MER57A LTR ERV1 1 37 -366 2152 110 0 0 chr2 88779794 88780129 -161907725 - AluSx SINE Alu 0 312 1 2447 146 22 22 chr2 88780129 88780494 -161907360 + MER57A LTR ERV1 36 403 0 326 273 19 84 chr2 88780494 88780615 -161907239 - L2 LINE L2 -35 3278 3168 1735 164 0 23 chr2 88780626 88780930 -161906924 + AluJb SINE Alu 12 308 -4 1851 148 0 0 chr2 88780930 88781207 -161906647 + AluSx SINE Alu 1 277 -35 312 133 0 0 chr2 88781207 88781252 -161906602 + HERV9 LTR ERV1 8314 8358 -41 195 42 0 0 chr2 88781307 88781331 -161906523 + (CA)n Simple_repeat Simple_repeat 1 24 0 1790 274 54 35 chr2 88781331 88781730 -161906124 - L2 LINE L2 -178 3135 2745 1998 139 0 3 chr2 88781730 88782032 -161905822 - AluJb SINE Alu -11 301 1 1790 274 54 35 chr2 88782032 88782538 -161905316 - L2 LINE L2 -568 2745 1993 762 195 0 0 chr2 88782548 88782676 -161905178 + FLAM_A SINE Alu 1 128 -5 1493 179 0 71 chr2 88782814 88783138 -161904716 - AluJb SINE Alu -11 301 1 847 137 16 0 chr2 88783153 88783277 -161904577 - FLAM_C SINE Alu -6 127 2 2085 114 0 43 chr2 88784052 88784377 -161903477 - AluSx SINE Alu -1 311 1 2180 112 7 0 chr2 88785594 88785899 -161901955 + AluSq SINE Alu 1 307 -6 2220 96 3 0 chr2 88785963 88786266 -161901588 - AluSp SINE Alu -9 304 1 194 208 0 19 chr2 88787115 88787168 -161900686 + MIR SINE MIR 84 135 -73 1551 195 20 3 chr2 88788319 88788616 -161899238 + AluJo SINE Alu 1 302 -10 346 292 31 0 chr2 88789156 88789252 -161898602 + MIR3 SINE MIR 106 204 -4 400 173 0 127 chr2 88789624 88789734 -161898120 - MIR3 SINE MIR -16 192 97 235 235 0 0 chr2 88789741 88789809 -161898045 + L1MC4 LINE L1 6636 6703 -1339 2038 118 0 3 chr2 88789810 88790099 -161897755 - AluSq SINE Alu -25 288 1 635 112 0 0 chr2 88790199 88790288 -161897566 + AluSg/x SINE Alu 216 304 -6 840 183 0 0 chr2 88790504 88790635 -161897219 - FLAM_C SINE Alu -2 131 1 194 128 26 0 chr2 88790796 88790835 -161897019 + (TAGG)n Simple_repeat Simple_repeat 4 43 0 264 149 21 0 chr2 88791050 88791097 -161896757 + L2 LINE L2 3264 3311 -2 212 315 27 0 chr2 88791146 88791219 -161896635 + MIR SINE MIR 49 123 -85 1817 175 7 3 chr2 88791249 88791557 -161896297 - 7SLRNA srpRNA srpRNA -1 319 11 923 129 0 7 chr2 88791571 88791710 -161896144 - FLAM_C SINE Alu -5 138 1 272 277 36 0 chr2 88791711 88791794 -161896060 - MLT1K LTR MaLR -11 577 492 386 133 17 0 chr2 88792084 88792144 -161895710 + U7 snRNA snRNA 2 62 -1 21 0 0 0 chr2 88792147 88792168 -161895686 + AT_rich Low_complexity Low_complexity 1 21 0 369 240 85 94 chr2 88792327 88792371 -161895483 - MIR SINE MIR -22 240 197 2098 92 0 61 chr2 88792371 88792698 -161895156 - AluSc SINE Alu -2 307 1 369 240 85 94 chr2 88792698 88792709 -161895145 - MIR SINE MIR -65 197 187 2606 94 0 37 chr2 88792709 88793081 -161894773 - L1PA13 LINE L1 -13 6150 5791 1332 192 105 4 chr2 88793081 88793347 -161894507 - AluJb SINE Alu -19 293 1 369 240 85 94 chr2 88793356 88793433 -161894421 - MIR SINE MIR -75 187 110 2163 91 3 10 chr2 88793433 88793729 -161894125 + AluSx SINE Alu 1 294 -18 369 240 85 94 chr2 88793729 88793799 -161894055 - MIR SINE MIR -152 110 41 1826 122 31 3 chr2 88794039 88794325 -161893529 - AluSx SINE Alu -18 294 1 931 176 57 6 chr2 88794732 88794908 -161892946 - MER3 DNA MER1_type -24 185 1 184 273 39 0 chr2 88795115 88795192 -161892662 - L2 LINE L2 -208 3064 2985 218 288 0 90 chr2 88795885 88795996 -161891858 - MIR SINE MIR -37 225 125 201 182 23 0 chr2 88797031 88797075 -161890779 - L2 LINE L2 -4 3309 3265 225 0 0 0 chr2 88799020 88799045 -161888809 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 906 63 0 0 chr2 88799444 88799555 -161888299 - HY1 scRNA scRNA -1 111 1 316 326 56 0 chr2 88801077 88801221 -161886633 + MARNA DNA Mariner 183 334 -252 1458 78 167 71 chr2 88801225 88801362 -161886492 + AluSg1 SINE Alu 1 123 -186 2380 30 10 13 chr2 88801362 88801698 -161886156 + AluY SINE Alu 1 311 0 1458 78 167 71 chr2 88801698 88801842 -161886012 + AluSg1 SINE Alu 123 309 0 283 274 14 21 chr2 88801858 88801968 -161885886 + MIR SINE MIR 81 148 -60 189 107 0 0 chr2 88802213 88802241 -161885613 + (GGATG)n Simple_repeat Simple_repeat 3 30 0 282 148 0 0 chr2 88803195 88803249 -161884605 + (TCCC)n Simple_repeat Simple_repeat 4 57 0 606 121 0 30 chr2 88804104 88804203 -161883651 + AluSg/x SINE Alu 210 305 -7 208 287 65 83 chr2 88804468 88804576 -161883278 - MER5A DNA MER1_type -66 123 18 284 298 38 38 chr2 88804607 88804738 -161883116 + MIR3 SINE MIR 39 169 -39 950 294 72 32 chr2 88804750 88804955 -161882899 + L2 LINE L2 2655 2850 -463 2218 91 210 5 chr2 88804955 88805327 -161882527 + LTR7 LTR ERV1 1 448 -2 950 294 72 32 chr2 88805327 88805746 -161882108 + L2 LINE L2 2850 3313 0 946 154 65 0 chr2 88805827 88805996 -161881858 + AluJb SINE Alu 120 299 -13 541 144 21 10 chr2 88806314 88806411 -161881443 + MER4A LTR ERV1 1 98 -566 * 1501 147 11 76 chr2 88806407 88806781 -161881073 + MER4A LTR ERV1 257 664 0 1108 86 149 0 chr2 88806784 88806959 -161880895 + MER4A-int LTR ERV1 1 201 -6397 707 99 0 0 chr2 88806962 88807053 -161880801 + AluSx SINE Alu 2 92 -221 740 143 0 0 chr2 88807144 88807249 -161880605 - AluJb SINE Alu -13 299 195 1526 121 0 0 chr2 88807252 88807467 -161880387 + AluSx SINE Alu 95 309 -1 1287 83 33 96 chr2 88807467 88807707 -161880147 + MER4A-int LTR ERV1 199 423 -6175 836 54 0 54 chr2 88807712 88807769 -161880085 + MER4-int LTR ERV1 3965 4024 -2574 2093 109 7 7 chr2 88807769 88808062 -161879792 + AluSx SINE Alu 1 293 -19 836 54 0 54 chr2 88808062 88808133 -161879721 + MER4-int LTR ERV1 4024 4086 -2512 991 229 39 3 chr2 88808256 88808540 -161879314 - AluY SINE Alu -7 294 1 378 256 135 0 chr2 88811036 88811169 -161876685 - MIR SINE MIR -105 157 7 953 211 39 34 chr2 88811812 88812020 -161875834 - MER3 DNA MER1_type 0 209 1 349 283 0 20 chr2 88812073 88812172 -161875682 + MIR SINE MIR 45 141 -121 682 176 123 53 chr2 88812197 88812367 -161875487 + MER68 LTR ERV1 1 182 -380 675 130 78 0 chr2 88812367 88812482 -161875372 + AluJb SINE Alu 2 125 -187 1734 227 31 16 chr2 88812508 88812896 -161874958 + MER68 LTR ERV1 161 554 -8 2261 97 0 16 chr2 88812959 88813267 -161874587 - AluSx SINE Alu -9 303 1 387 295 19 0 chr2 88813308 88813413 -161874441 + MIR SINE MIR 156 262 0 2179 80 7 27 chr2 88813634 88813933 -161873921 - AluSp SINE Alu -20 293 1 803 134 0 0 chr2 88813963 88814075 -161873779 + AluSq/x SINE Alu 2 113 -199 1570 101 9 0 chr2 88814175 88814392 -161873462 + AluY SINE Alu 83 301 -10 1956 145 0 0 chr2 88815021 88815318 -161872536 - AluJb SINE Alu -15 297 1 2098 103 20 3 chr2 88815546 88815846 -161872008 - AluSx SINE Alu -7 305 1 218 348 0 0 chr2 88816152 88816221 -161871633 - MIR SINE MIR -58 150 82 1250 150 0 35 chr2 88818165 88818391 -161869463 - AluJb SINE Alu -9 303 86 902 167 61 11 chr2 88819194 88819374 -161868480 + MER5A DNA MER1_type 1 189 0 2026 96 22 0 chr2 88819417 88819714 -161868140 + AluSx SINE Alu 9 311 0 655 141 15 82 chr2 88819732 88819867 -161867987 + FLAM_C SINE Alu 13 138 -5 296 309 44 22 chr2 88820832 88820968 -161866886 + MER91A DNA MER1_type 1 139 -57 695 171 0 0 chr2 88821473 88821578 -161866276 - AluJb SINE Alu -12 300 196 2255 85 3 0 chr2 88821678 88821973 -161865881 - AluSp SINE Alu -16 297 2 467 278 77 26 chr2 88821974 88822168 -161865686 + L2 LINE L2 3109 3312 -1 295 235 165 26 chr2 88824226 88824341 -161863513 - MIR3 SINE MIR -65 143 13 1878 238 43 58 chr2 88824351 88824408 -161863446 + L1M4 LINE L1 3129 3185 -2961 1983 138 3 0 chr2 88824408 88824699 -161863155 - AluSx SINE Alu -20 292 1 2187 109 0 0 chr2 88824709 88825003 -161862851 - AluSx SINE Alu -17 295 2 1878 238 43 58 chr2 88825003 88825540 -161862314 + L1M4 LINE L1 3194 3738 -2408 2257 115 0 0 chr2 88825540 88825844 -161862010 + AluSg SINE Alu 1 304 -6 1878 238 43 58 chr2 88825844 88825918 -161861936 + L1M4 LINE L1 3738 3812 -2334 1188 129 8 76 chr2 88825918 88826181 -161861673 + L1MA6 LINE L1 6056 6300 0 1878 238 43 58 chr2 88826181 88826343 -161861511 + L1M4 LINE L1 3812 3959 -2187 932 174 0 78 chr2 88826347 88826402 -161861452 + AluJo SINE Alu 87 145 -167 2242 82 3 0 chr2 88826402 88826712 -161861142 + AluSg SINE Alu 1 311 0 932 174 0 78 chr2 88826712 88826885 -161860969 + AluJo SINE Alu 145 298 -14 318 194 45 15 chr2 88826899 88826966 -161860888 + L1M4 LINE L1 3962 4030 -2116 180 236 14 56 chr2 88827001 88827073 -161860781 + L2 LINE L2 2156 2224 -1090 21 57 0 0 chr2 88827152 88827187 -161860667 + AT_rich Low_complexity Low_complexity 1 35 0 784 99 0 6 chr2 88827953 88828207 -161859647 + AluSx SINE Alu 1 304 -8 224 208 0 0 chr2 88828212 88828260 -161859594 + MER5B DNA MER1_type 16 63 -115 886 131 28 7 chr2 88828260 88828405 -161859449 + MER31A LTR ERV1 1 148 -337 208 137 20 39 chr2 88828928 88828979 -161858875 + GA-rich Low_complexity Low_complexity 5 54 0 340 326 0 11 chr2 88829646 88829735 -161858119 - L2 LINE L2 0 3313 3226 687 254 15 46 chr2 88829739 88829829 -161858025 - MIR SINE MIR -54 208 117 1657 187 47 21 chr2 88829829 88830209 -161857645 - MLT1B LTR MaLR 0 390 1 687 254 15 46 chr2 88830209 88830315 -161857539 - MIR SINE MIR -145 117 18 236 263 13 26 chr2 88831254 88831330 -161856524 - L1ME LINE L1 -424 5697 5623 2668 125 55 77 chr2 88831500 88832069 -161855785 - MER21A LTR ERV1 0 931 376 1361 135 37 20 chr2 88832074 88832318 -161855536 - MER21A LTR ERV1 -667 264 17 650 256 140 30 chr2 88832555 88833032 -161854822 + LTR67 LTR ERVL 4 549 -8 2127 107 13 25 chr2 88833035 88833352 -161854502 + AluSq SINE Alu 1 313 0 2242 104 0 0 chr2 88833510 88833816 -161854038 - AluSg SINE Alu 0 306 1 1689 167 0 61 chr2 88833823 88834134 -161853720 - AluJo SINE Alu -20 292 1 28 0 0 0 chr2 88834134 88834162 -161853692 + AT_rich Low_complexity Low_complexity 1 28 0 200 167 0 0 chr2 88834189 88834219 -161853635 + polypurine Low_complexity Low_complexity 4 33 0 2095 134 3 31 chr2 88835069 88835390 -161852464 + AluSx SINE Alu 1 312 0 2360 110 0 0 chr2 88835413 88835723 -161852131 + AluSq SINE Alu 1 310 -3 208 326 112 11 chr2 88835953 88836131 -161851723 + L2 LINE L2 2712 2907 -407 911 145 0 41 chr2 88836242 88836387 -161851467 - FLAM_C SINE Alu -4 139 1 195 129 0 0 chr2 88836419 88836450 -161851404 + (A)n Simple_repeat Simple_repeat 1 31 0 438 292 119 45 chr2 88836728 88837081 -161850773 + L2 LINE L2 2883 3261 -11 2197 74 0 51 chr2 88838183 88838508 -161849346 + AluSx SINE Alu 3 312 0 231 161 0 0 chr2 88839945 88840001 -161847853 + (TG)n Simple_repeat Simple_repeat 2 57 0 2484 82 0 3 chr2 88840813 88841119 -161846735 + AluSx SINE Alu 1 305 -7 671 239 82 49 chr2 88841176 88841419 -161846435 + MIR SINE MIR 11 261 -1 2159 100 10 17 chr2 88841784 88842085 -161845769 + AluSx SINE Alu 1 299 -13 282 167 152 0 chr2 88842204 88842270 -161845584 - MIR3 SINE MIR -24 184 109 1105 155 0 11 chr2 88842581 88842755 -161845099 + FRAM SINE Alu 1 172 -4 273 264 36 55 chr2 88842763 88842873 -161844981 - MIR SINE MIR -71 191 84 287 306 54 9 chr2 88842918 88843029 -161844825 - L2 LINE L2 -1 3271 3156 597 171 33 1 chr2 88843036 88843191 -161844663 + L1ME2 LINE L1 6006 6160 -2 184 241 72 48 chr2 88843373 88843456 -161844398 - L2 LINE L2 -210 3062 2978 340 194 0 137 chr2 88843831 88843865 -161843989 + MIR SINE MIR 38 75 -187 2045 126 10 17 chr2 88843865 88844166 -161843688 + AluJb SINE Alu 1 299 -13 340 194 0 137 chr2 88844166 88844270 -161843584 + MIR SINE MIR 75 157 -105 2455 86 0 9 chr2 88844983 88845298 -161842556 - AluSq SINE Alu -1 312 1 198 222 139 28 chr2 88845710 88845782 -161842072 - MIR SINE MIR -114 148 69 1068 65 24 18 chr2 88845877 88846045 -161841809 - L1PA13 LINE L1 0 6163 5995 2296 77 0 7 chr2 88846054 88846365 -161841489 - AluSg SINE Alu 0 309 1 2204 119 0 0 chr2 88846521 88846816 -161841038 - AluSx SINE Alu -17 295 1 236 301 43 0 chr2 88847138 88847231 -161840623 + MIR3 SINE MIR 77 173 -35 1883 157 26 7 chr2 88847440 88847746 -161840108 + AluJo SINE Alu 1 312 0 186 341 71 12 chr2 88849473 88849558 -161838296 - L2 LINE L2 -86 3186 3097 365 253 116 0 chr2 88849582 88849677 -161838177 + L3 LINE CR1 1407 1512 -65 378 0 0 0 chr2 88850212 88850254 -161837600 + (TG)n Simple_repeat Simple_repeat 1 42 0 2097 122 4 0 chr2 88850254 88850532 -161837322 - AluSx SINE Alu -33 279 1 342 331 48 8 chr2 88850712 88850836 -161837018 - MER5B DNA MER1_type 0 178 50 2190 139 0 0 chr2 88850860 88851162 -161836692 - AluSx SINE Alu -10 302 1 262 111 22 22 chr2 88851162 88851207 -161836647 - MER5B DNA MER1_type -114 64 20 254 344 0 10 chr2 88851239 88851342 -161836512 + MER5A DNA MER1_type 28 118 -60 2047 144 7 3 chr2 88851365 88851663 -161836191 + AluSx SINE Alu 3 301 -11 5396 130 140 107 chr2 88851886 88853420 -161834434 + pTR5 LTR ERV1 743 2438 0 2233 105 3 0 chr2 88853474 88853790 -161834064 + AluSx SINE Alu 1 317 0 461 149 0 64 chr2 88853804 88853898 -161833956 + HY4 scRNA scRNA 2 89 -4 200 269 69 39 chr2 88853900 88854030 -161833824 + L2 LINE L2 2699 2832 -482 2151 124 7 19 chr2 88854158 88854465 -161833389 - AluSx SINE Alu -9 303 1 1559 169 47 27 chr2 88854474 88854775 -161833079 - AluJb SINE Alu 0 312 6 296 86 0 86 chr2 88854983 88855041 -161832813 + Alu SINE Alu 250 302 0 2053 123 21 0 chr2 88855252 88855537 -161832317 + AluSx SINE Alu 1 291 -21 419 86 129 0 chr2 88855742 88855812 -161832042 - MADE1 DNA Mariner 0 80 2 1865 108 20 0 chr2 88856073 88856324 -161831530 + AluSp SINE Alu 1 256 -57 1514 138 101 12 chr2 88856332 88856659 -161831195 - L1MA4 LINE L1 -3 6297 5942 992 126 7 0 chr2 88856659 88856802 -161831052 + FRAM SINE Alu 25 168 -8 656 131 0 0 chr2 88856803 88856902 -161830952 - AluJo/FLAM SINE Alu -195 117 19 1905 112 13 63 chr2 88856902 88857013 -161830841 - L1MA4 LINE L1 -614 5686 5571 791 145 0 8 chr2 88857013 88857144 -161830710 - FLAM_C SINE Alu -3 130 1 1905 112 13 63 chr2 88857144 88857415 -161830439 - L1MA4 LINE L1 -729 5571 5323 1188 160 55 27 chr2 88857417 88857636 -161830218 - AluSg/x SINE Alu -4 308 84 735 141 67 0 chr2 88857659 88857794 -161830060 - L1MA4 LINE L1 -864 5282 5139 1965 158 0 0 chr2 88861018 88861315 -161826539 + AluJo SINE Alu 1 297 -15 353 304 52 58 chr2 88862066 88862257 -161825597 - MIR3 SINE MIR -18 190 1 297 244 177 85 chr2 88862254 88862357 -161825497 - MER5A DNA MER1_type 0 189 64 * 2393 87 10 0 chr2 88862357 88862655 -161825199 - AluSp SINE Alu -12 301 1 297 244 177 85 chr2 88862655 88862715 -161825139 - MER5A DNA MER1_type -125 64 11 2173 123 3 0 chr2 88863211 88863511 -161824343 - AluSx SINE Alu -11 301 1 1354 130 62 14 chr2 88863671 88863879 -161823975 + AluSg/x SINE Alu 77 294 -16 2504 69 3 0 chr2 88867386 88867690 -161820164 + AluSc SINE Alu 1 305 -4 21 36 0 0 chr2 88868678 88868706 -161819148 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr2 88868846 88868866 -161818988 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2398 80 7 0 chr2 88868868 88869155 -161818699 - AluSc SINE Alu -20 289 1 25 0 0 0 chr2 88869155 88869180 -161818674 + AT_rich Low_complexity Low_complexity 1 25 0 2025 129 13 19 chr2 88872621 88872931 -161814923 - AluSx SINE Alu -4 308 1 522 169 7 29 chr2 88873311 88873367 -161814487 + Tigger3(Golem) DNA MER2_type 175 231 -1000 2189 89 17 3 chr2 88873367 88873658 -161814196 - AluSq SINE Alu -18 295 1 522 169 7 29 chr2 88873658 88873737 -161814117 + Tigger3(Golem) DNA MER2_type 231 307 -924 2046 100 4 0 chr2 88873840 88874099 -161813755 - AluY SINE Alu -51 260 1 2623 66 0 0 chr2 88874116 88874421 -161813433 - AluY SINE Alu -6 305 1 15218 93 43 20 chr2 88874422 88875432 -161812422 + MER4A-int LTR ERV1 4080 5065 -1533 2016 142 7 3 chr2 88875432 88875735 -161812119 + AluSx SINE Alu 1 304 -8 15218 93 43 20 chr2 88875735 88876752 -161811102 + MER4A-int LTR ERV1 5065 6176 -422 2218 84 11 18 chr2 88876752 88877065 -161810789 + AluSg SINE Alu 1 311 0 15218 93 43 20 chr2 88877065 88877496 -161810358 + MER4A-int LTR ERV1 6176 6596 -2 613 103 21 10 chr2 88877504 88877601 -161810253 + MER4A LTR ERV1 1 98 -566 1573 126 186 80 chr2 88877601 88877966 -161809888 + MER4A LTR ERV1 261 664 0 4356 70 5 0 chr2 88877967 88878555 -161809299 + LTR10C LTR ERV1 1 591 0 393 310 9 9 chr2 88878557 88878673 -161809181 - MIR SINE MIR -109 153 38 2472 227 47 11 chr2 88879196 88880120 -161807734 + L1MDa LINE L1 1 1188 -5352 2011 186 66 45 chr2 88880120 88880605 -161807249 + MLT1D LTR MaLR 2 496 -9 3396 176 70 81 chr2 88880610 88881160 -161806694 + L1MDa LINE L1 1179 1734 -4806 1883 97 109 8 chr2 88881160 88881427 -161806427 - AluSg SINE Alu -16 294 1 1810 154 0 56 chr2 88881437 88881615 -161806239 - AluJo SINE Alu -22 290 135 2232 132 0 0 chr2 88881615 88881910 -161805944 + AluSx SINE Alu 1 295 -17 1810 154 0 56 chr2 88881910 88882037 -161805817 - AluJo SINE Alu -177 135 2 3396 176 70 81 chr2 88882037 88882391 -161805463 + L1MDa LINE L1 1743 2099 -4441 2343 111 0 0 chr2 88882391 88882698 -161805156 - AluSg SINE Alu -3 307 1 3396 176 70 81 chr2 88882698 88882743 -161805111 + L1MDa LINE L1 2099 2143 -4397 327 167 33 0 chr2 88882743 88882803 -161805051 + U7 snRNA snRNA 2 63 0 3396 176 70 81 chr2 88882803 88882928 -161804926 + L1MDa LINE L1 2143 2254 -4286 2063 133 13 13 chr2 88882976 88883284 -161804570 - AluSx SINE Alu -4 308 1 2403 107 0 0 chr2 88883340 88883649 -161804205 - AluSx SINE Alu -3 309 1 25 51 0 0 chr2 88883721 88883760 -161804094 + AT_rich Low_complexity Low_complexity 1 39 0 409 273 187 10 chr2 88883788 88883910 -161803944 + L2 LINE L2 2729 2828 -486 2101 108 10 30 chr2 88883910 88884065 -161803789 - AluSx SINE Alu -21 291 143 2209 120 0 0 chr2 88884065 88884364 -161803490 - AluSg SINE Alu -7 303 5 2101 108 10 30 chr2 88884364 88884505 -161803349 - AluSx SINE Alu -169 143 1 409 273 187 10 chr2 88884505 88884591 -161803263 + L2 LINE L2 2828 2974 -340 700 178 99 20 chr2 88885819 88885971 -161801883 - FRAM SINE Alu -12 164 1 212 256 44 22 chr2 88886553 88886643 -161801211 - L2 LINE L2 -2 3270 3179 2250 138 0 0 chr2 88887661 88887972 -161799882 - 7SLRNA srpRNA srpRNA -9 311 1 255 261 72 65 chr2 88887982 88888044 -161799810 + L2 LINE L2 2652 2712 -602 2498 69 7 0 chr2 88888044 88888347 -161799507 + AluY SINE Alu 1 305 -6 255 261 72 65 chr2 88888347 88888422 -161799432 + L2 LINE L2 2712 2790 -524 738 79 0 0 chr2 88888568 88888669 -161799185 - HY3 scRNA scRNA 0 101 1 307 238 50 0 chr2 88888669 88888749 -161799105 + Tigger5 DNA MER2_type 2240 2323 0 547 272 124 70 chr2 88888757 88889143 -161798711 + L2 LINE L2 2852 3258 -14 189 0 0 0 chr2 88889143 88889164 -161798690 + (TGAA)n Simple_repeat Simple_repeat 4 24 0 397 243 56 19 chr2 88889535 88889642 -161798212 + MIR SINE MIR 2 112 -150 2217 99 3 43 chr2 88889983 88890287 -161797567 + AluSq SINE Alu 1 292 -21 884 117 0 0 chr2 88890874 88891002 -161796852 - AluSg/x SINE Alu 0 312 185 573 91 0 0 chr2 88891023 88891100 -161796754 - Alu SINE Alu -231 78 2 23 33 0 0 chr2 88891104 88891134 -161796720 + AT_rich Low_complexity Low_complexity 1 30 0 1525 154 120 11 chr2 88891162 88891428 -161796426 + AluJo SINE Alu 18 312 0 24 77 0 0 chr2 88891428 88891480 -161796374 + AT_rich Low_complexity Low_complexity 1 52 0 735 172 147 59 chr2 88891622 88891656 -161796198 + AluJo SINE Alu 83 113 -199 2214 113 3 0 chr2 88891656 88891947 -161795907 - AluSg SINE Alu -16 294 3 735 172 147 59 chr2 88891947 88892116 -161795738 + AluJo SINE Alu 113 304 -8 1205 126 0 44 chr2 88892147 88892300 -161795554 - AluSg/x SINE Alu -53 259 114 2071 128 42 25 chr2 88892300 88892658 -161795196 + THE1B LTR MaLR 1 364 0 1205 126 0 44 chr2 88892658 88892687 -161795167 - AluSg/x SINE Alu -198 114 85 301 313 232 35 chr2 88892777 88892950 -161794904 - MIR SINE MIR -42 220 16 2188 130 3 0 chr2 88893305 88893605 -161794249 - AluSx SINE Alu 0 312 12 215 269 141 0 chr2 88893854 88893932 -161793922 + L2 LINE L2 3145 3233 -39 2282 60 18 33 chr2 88894141 88894304 -161793550 - L1PA13 LINE L1 0 6163 5999 2621 50 0 7 chr2 88894304 88894605 -161793249 - AluY SINE Alu -12 299 1 2282 60 18 33 chr2 88894605 88894776 -161793078 - L1PA13 LINE L1 -164 5999 5834 886 118 7 37 chr2 88895136 88895272 -161792582 + AluJo SINE Alu 3 134 -178 410 88 0 0 chr2 88895273 88895330 -161792524 + U3 snRNA snRNA 19 75 -142 2152 128 0 7 chr2 88895598 88895902 -161791952 + AluSx SINE Alu 1 302 -10 1126 188 147 8 chr2 88896219 88896464 -161791390 - AluJo SINE Alu -23 289 11 867 262 125 50 chr2 88896474 88896520 -161791334 + L1MC4a LINE L1 5361 5402 -2406 222 91 0 0 chr2 88896520 88896553 -161791301 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 2273 87 0 68 chr2 88896561 88896883 -161790971 + AluSx SINE Alu 3 302 -10 867 262 125 50 chr2 88896883 88897388 -161790466 + L1MC4a LINE L1 5408 5963 -1845 2317 116 3 0 chr2 88897981 88898283 -161789571 - AluSx SINE Alu -1 311 9 2406 88 0 0 chr2 88899393 88899688 -161788166 - AluSg SINE Alu -15 295 1 311 239 65 43 chr2 88901228 88901320 -161786534 - MIR SINE MIR -96 112 19 182 162 0 54 chr2 88902044 88902081 -161785773 + MIR SINE MIR 115 149 -59 215 327 0 0 chr2 88902676 88902731 -161785123 + MIR SINE MIR 44 98 -110 568 257 84 17 chr2 88902761 88902838 -161785016 - MER112 DNA MER1_type 0 260 190 1936 108 79 0 chr2 88902838 88903115 -161784739 - AluSx SINE Alu -13 299 1 568 257 84 17 chr2 88903115 88903274 -161784580 - MER112 DNA MER1_type -70 190 8 1874 145 7 33 chr2 88903612 88903739 -161784115 + AluJo SINE Alu 6 135 -177 2418 82 0 22 chr2 88903739 88904057 -161783797 + AluY SINE Alu 1 311 0 1874 145 7 33 chr2 88904057 88904233 -161783621 + AluJo SINE Alu 135 301 -11 1815 147 6 48 chr2 88904731 88905045 -161782809 - AluSx SINE Alu -11 301 1 920 167 0 0 chr2 88907100 88907238 -161780616 + FLAM_C SINE Alu 1 138 -5 2446 103 0 0 chr2 88907241 88907551 -161780303 + AluSg SINE Alu 1 310 0 28 29 0 0 chr2 88907580 88907615 -161780239 + AT_rich Low_complexity Low_complexity 1 35 0 1879 76 4 8 chr2 88907753 88907990 -161779864 - AluY SINE Alu -75 236 1 1191 85 0 0 chr2 88908671 88908812 -161779042 + AluSq/x SINE Alu 1 141 -172 2156 127 3 0 chr2 88908812 88909103 -161778751 + AluSg SINE Alu 1 292 -18 305 296 90 52 chr2 88909164 88909330 -161778524 - L2 LINE L2 -214 3058 2900 359 185 0 12 chr2 88909330 88909411 -161778443 - MER116 DNA Mariner 0 80 1 305 296 90 52 chr2 88909411 88909540 -161778314 - L2 LINE L2 -372 2900 2748 1316 215 30 30 chr2 88909540 88909552 -161778302 - AluJo SINE Alu -10 302 291 213 39 0 0 chr2 88909552 88909578 -161778276 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 1316 215 30 30 chr2 88909578 88909867 -161777987 - AluJo SINE Alu -20 292 1 305 296 90 52 chr2 88909867 88909889 -161777965 - L2 LINE L2 -524 2748 2728 254 286 67 0 chr2 88910504 88910609 -161777245 - MIR3 SINE MIR -36 172 61 23 33 0 0 chr2 88914350 88914380 -161773474 + AT_rich Low_complexity Low_complexity 1 30 0 1913 157 0 47 chr2 88915998 88916317 -161771537 + AluJb SINE Alu 1 304 -8 833 186 0 0 chr2 88916387 88916516 -161771338 + FRAM SINE Alu 12 140 -36 207 0 0 0 chr2 88916525 88916548 -161771306 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2325 75 37 0 chr2 88917070 88917365 -161770489 + AluSp SINE Alu 3 308 -5 735 119 9 0 chr2 88917894 88918003 -161769851 + AluSq/x SINE Alu 4 113 -199 827 148 0 16 chr2 88918008 88918130 -161769724 - FLAM_C SINE Alu -23 120 1 1588 219 45 23 chr2 88918391 88918876 -161768978 - L1M4 LINE L1 -1347 4799 4304 2302 113 0 0 chr2 88918989 88919290 -161768564 - AluSg SINE Alu -9 301 1 2303 99 3 0 chr2 88919292 88919586 -161768268 - AluSx SINE Alu -17 295 1 1607 128 135 59 chr2 88919705 88919994 -161767860 + AluJo SINE Alu 1 311 -1 2174 147 0 0 chr2 88920163 88920470 -161767384 + AluSx SINE Alu 1 307 -5 805 209 251 17 chr2 88920621 88920860 -161766994 - AluSg1 SINE Alu -3 306 12 389 282 99 30 chr2 88920938 88921069 -161766785 + L1ME4a LINE L1 5717 5856 -265 2793 10 0 13 chr2 88921405 88921714 -161766140 - AluYa5 SINE Alu -6 305 1 3064 111 141 38 chr2 88921717 88921761 -161766093 + Tigger3(Golem) DNA MER2_type 2332 2370 -658 1991 126 34 3 chr2 88921761 88922055 -161765799 - AluSq SINE Alu -10 303 1 3064 111 141 38 chr2 88922055 88922366 -161765488 + Tigger3(Golem) DNA MER2_type 2370 2648 -380 2346 112 0 0 chr2 88922366 88922679 -161765175 - AluSq SINE Alu 0 313 1 3064 111 141 38 chr2 88922679 88922714 -161765140 + Tigger3(Golem) DNA MER2_type 2648 2678 -350 2146 108 3 69 chr2 88922714 88923047 -161764807 - AluSx SINE Alu -1 311 1 3064 111 141 38 chr2 88923047 88923286 -161764568 + Tigger3(Golem) DNA MER2_type 2678 3028 0 947 167 14 100 chr2 88923286 88923479 -161764375 + L1MB8 LINE L1 5922 6130 -48 2474 88 0 0 chr2 88923479 88923776 -161764078 - AluSx SINE Alu -15 297 1 947 167 14 100 chr2 88923776 88923789 -161764065 + L1MB8 LINE L1 6130 6143 -35 1679 186 0 30 chr2 88923789 88924090 -161763764 - AluJo SINE Alu -20 292 1 947 167 14 100 chr2 88924090 88924163 -161763691 + L1MB8 LINE L1 6143 6178 0 748 194 0 12 chr2 88926312 88926564 -161761290 + GA-rich Low_complexity Low_complexity 1 248 0 186 284 54 0 chr2 88926969 88927043 -161760811 + MIR SINE MIR 45 122 -86 2401 56 0 14 chr2 88927953 88928273 -161759581 + AluY SINE Alu 1 316 0 292 314 36 21 chr2 88929132 88929272 -161758582 + MIR3 SINE MIR 46 187 -21 294 154 0 0 chr2 88930116 88930168 -161757686 + Tigger5 DNA MER2_type 28 79 -2244 332 203 14 0 chr2 88930170 88930239 -161757615 - Tigger5 DNA MER2_type -6 2317 2248 365 180 0 0 chr2 88930241 88930302 -161757552 + Tigger5 DNA MER2_type 2263 2323 0 186 43 0 0 chr2 88931560 88931583 -161756271 + (A)n Simple_repeat Simple_repeat 1 23 0 1614 147 51 22 chr2 88931592 88931885 -161755969 + AluJb SINE Alu 1 301 0 205 289 124 46 chr2 88932036 88932230 -161755624 - MIR SINE MIR -23 239 31 2205 101 0 7 chr2 88932763 88933073 -161754781 - AluSx SINE Alu 0 308 1 496 262 101 13 chr2 88933529 88933678 -161754176 - MIR SINE MIR -67 195 34 2367 103 0 16 chr2 88933837 88934148 -161753706 + AluSx SINE Alu 1 306 -6 347 235 76 30 chr2 88934720 88934852 -161753002 + L1ME4a LINE L1 5966 6103 -18 612 0 0 0 chr2 88935012 88935080 -161752774 + (TG)n Simple_repeat Simple_repeat 2 69 0 1893 138 29 0 chr2 88935080 88935356 -161752498 - AluJb SINE Alu -28 284 1 2290 100 0 10 chr2 88935374 88935673 -161752181 - AluSx SINE Alu -16 296 1 596 39 26 0 chr2 88935824 88935902 -161751952 + MADE1 DNA Mariner 1 80 0 2389 65 31 0 chr2 88936439 88936729 -161751125 - AluSc SINE Alu -10 299 1 604 62 0 0 chr2 88936734 88936815 -161751039 - Alu SINE Alu -2 307 227 1474 95 0 0 chr2 88936815 88937004 -161750850 + AluSg/x SINE Alu 120 308 -4 302 264 91 70 chr2 88937008 88937159 -161750695 - L2 LINE L2 -144 3169 3023 1252 175 163 4 chr2 88937159 88937410 -161750444 - AluJo SINE Alu -11 291 1 302 264 91 70 chr2 88937410 88937588 -161750266 - L2 LINE L2 -290 3023 2833 608 322 81 43 chr2 88937769 88938166 -161749688 - HAL1b LINE L1 -845 503 92 2792 235 45 29 chr2 88938296 88938876 -161748978 + L1MC4 LINE L1 7197 7766 -276 2363 107 7 0 chr2 88938876 88939185 -161748669 + AluSx SINE Alu 1 311 -1 2792 235 45 29 chr2 88939185 88939326 -161748528 + L1MC4 LINE L1 7766 7935 -107 186 43 0 0 chr2 88939326 88939349 -161748505 + (GA)n Simple_repeat Simple_repeat 2 24 0 2792 235 45 29 chr2 88939349 88939453 -161748401 + L1MC4 LINE L1 7935 8036 -6 2314 84 3 0 chr2 88939455 88939768 -161748086 + AluSp SINE Alu 1 314 0 2045 132 14 3 chr2 88939916 88940205 -161747649 - AluJb SINE Alu -20 292 1 648 167 24 32 chr2 88940448 88940574 -161747280 + MER5A DNA MER1_type 1 125 -64 533 220 59 86 chr2 88940555 88940620 -161747234 + MER5A DNA MER1_type 7 72 -117 * 2559 77 0 0 chr2 88940620 88940931 -161746923 + AluY SINE Alu 1 311 0 533 220 59 86 chr2 88940931 88941051 -161746803 + MER5A DNA MER1_type 72 187 -2 2766 143 9 9 chr2 88941366 88941793 -161746061 - MSTA LTR MaLR -1 427 1 256 188 171 82 chr2 88941793 88941963 -161745891 + MLT1H LTR MaLR 133 317 -232 229 218 149 35 chr2 88941980 88942067 -161745787 + MLT1H LTR MaLR 433 529 -13 1974 162 0 3 chr2 88942087 88942390 -161745464 + AluJb SINE Alu 1 302 -10 1583 188 33 0 chr2 88942643 88942919 -161744935 + AluJo SINE Alu 22 306 -6 823 158 0 14 chr2 88942921 88943060 -161744794 + AluSp/q SINE Alu 175 311 -2 2238 178 47 2 chr2 88943107 88943534 -161744320 + MLT1H-int LTR MaLR 264 709 -662 269 254 0 0 chr2 88943526 88943589 -161744265 + MLT1H-int LTR MaLR 825 887 -484 * 255 224 17 112 chr2 88943683 88943799 -161744055 + MLT1H-int LTR MaLR 1278 1382 -353 355 257 117 29 chr2 88943800 88943971 -161743883 + MLT2D LTR ERVL 222 407 -7 435 209 52 17 chr2 88944031 88944146 -161743708 + L1ME1 LINE L1 6042 6160 -6 780 176 0 0 chr2 88944152 88944271 -161743583 + FLAM_C SINE Alu 1 119 -14 2336 95 0 10 chr2 88944347 88944651 -161743203 + AluSx SINE Alu 1 301 -11 2073 115 17 7 chr2 88944654 88944949 -161742905 + AluSq SINE Alu 1 298 -15 288 0 0 0 chr2 88945374 88945406 -161742448 + (CA)n Simple_repeat Simple_repeat 2 33 0 311 234 226 16 chr2 88945409 88945533 -161742321 + L1ME4a LINE L1 5971 6120 -1 490 200 50 0 chr2 88946284 88946384 -161741470 + MER5B DNA MER1_type 1 105 -73 744 287 18 22 chr2 88946566 88946813 -161741041 - MIR SINE MIR 0 262 22 1514 176 86 18 chr2 88947674 88947833 -161740021 - AluJo SINE Alu -14 298 151 2226 93 7 0 chr2 88947833 88948113 -161739741 + AluSp SINE Alu 1 282 -31 1514 176 86 18 chr2 88948113 88948232 -161739622 - AluJo SINE Alu -161 151 1 1246 112 0 12 chr2 88948244 88948414 -161739440 - AluSg/x SINE Alu -4 308 141 2304 103 7 0 chr2 88948416 88948716 -161739138 - AluSp SINE Alu -11 302 1 2554 48 0 0 chr2 88949380 88949673 -161738181 - AluY SINE Alu -18 293 1 261 185 22 76 chr2 88949755 88949847 -161738007 + L1MC5 LINE L1 7848 7934 -27 205 290 130 0 chr2 88949899 88949968 -161737886 + MIR3 SINE MIR 124 201 -7 2445 87 0 0 chr2 88950315 88950624 -161737230 + AluY SINE Alu 1 309 -2 441 0 0 0 chr2 88951781 88951830 -161736024 + (CA)n Simple_repeat Simple_repeat 2 50 0 473 329 78 9 chr2 88951928 88952147 -161735707 + MIR SINE MIR 29 262 0 2270 123 0 0 chr2 88952336 88952637 -161735217 + AluSx SINE Alu 1 301 -11 224 275 93 83 chr2 88953199 88953300 -161734554 - MIR SINE MIR -40 222 117 2386 93 3 3 chr2 88953300 88953600 -161734254 + AluSx SINE Alu 1 300 -12 224 275 93 83 chr2 88953600 88953691 -161734163 - MIR SINE MIR -145 117 28 759 167 91 99 chr2 88954260 88954481 -161733373 - MER20 DNA MER1_type 0 219 1 203 128 179 0 chr2 88954505 88954544 -161733310 + L2 LINE L2 3188 3233 -80 833 130 0 36 chr2 88955206 88955344 -161732510 - FLAM_C SINE Alu 0 133 1 267 310 82 46 chr2 88955964 88956293 -161731561 - L1M4 LINE L1 -2154 3992 3652 186 108 108 0 chr2 88957919 88957956 -161729898 + MIR3 SINE MIR 115 155 -53 181 269 39 0 chr2 88957933 88957985 -161729869 - L3 LINE CR1 -86 1491 1438 * 197 234 81 63 chr2 88957965 88958076 -161729778 - L2 LINE L2 -567 2747 2635 2085 138 0 7 chr2 88958683 88958988 -161728866 - AluJb SINE Alu -9 303 1 206 234 172 47 chr2 88959333 88959461 -161728393 + MIR3 SINE MIR 23 166 -42 292 251 184 11 chr2 88959547 88959672 -161728182 + MIR SINE MIR 36 178 -63 649 197 124 36 chr2 88959848 88960041 -161727813 + MER63A DNA MER1_type 1 210 0 610 306 103 21 chr2 88960906 88961197 -161726657 - L1MC/D LINE L1 -2101 5707 5393 189 154 0 0 chr2 88961790 88961829 -161726025 + (ATTG)n Simple_repeat Simple_repeat 2 40 0 1709 177 0 7 chr2 88961829 88962111 -161725743 - AluJo SINE Alu -32 280 1 226 277 76 17 chr2 88962179 88962298 -161725556 + HAL1b LINE L1 1213 1338 -10 227 204 0 0 chr2 88963040 88963084 -161724770 - L2 LINE L2 -224 3048 3005 2096 132 0 0 chr2 88963211 88963507 -161724347 + AluSg SINE Alu 1 296 -14 1928 125 3 27 chr2 88963638 88963933 -161723921 + AluJo SINE Alu 14 301 -11 501 328 66 0 chr2 88963956 88964139 -161723715 - MER117 DNA MER1_type -2 195 1 24 53 0 0 chr2 88964964 88965002 -161722852 + AT_rich Low_complexity Low_complexity 1 38 0 807 87 102 47 chr2 88965014 88965141 -161722713 + AluJb SINE Alu 1 134 -178 315 267 11 44 chr2 88965142 88965232 -161722622 + L1MC4 LINE L1 6619 6705 -1337 264 118 132 15 chr2 88965309 88965377 -161722477 - MER113 DNA MER1_type? -407 114 39 1887 78 118 11 chr2 88965879 88966149 -161721705 + AluSg SINE Alu 1 299 -11 613 207 131 7 chr2 88966782 88966927 -161720927 - MIR SINE MIR -10 252 90 2355 103 3 3 chr2 88966953 88967253 -161720601 - AluSx SINE Alu -12 300 1 2324 88 34 0 chr2 88967267 88967562 -161720292 - AluSx SINE Alu -7 305 1 339 231 56 69 chr2 88967587 88967747 -161720107 - MIR3 SINE MIR -18 190 33 482 267 131 11 chr2 88968251 88968442 -161719412 + L1ME4a LINE L1 5515 5728 -393 347 283 94 50 chr2 88968569 88968749 -161719105 + L1ME4a LINE L1 5865 6052 -69 31 0 0 0 chr2 88968806 88968837 -161719017 + AT_rich Low_complexity Low_complexity 1 31 0 384 273 48 38 chr2 88969199 88969361 -161718493 - MER5B DNA MER1_type -3 186 13 228 265 73 0 chr2 88970988 88971056 -161716798 + MER94 DNA DNA 28 100 -34 266 333 52 15 chr2 88971080 88971215 -161716639 + L2 LINE L2 2447 2586 -728 2115 189 93 124 chr2 89022413 89022817 -161665037 + L1MC4 LINE L1 7157 7572 -470 2502 54 3 0 chr2 89022817 89023112 -161664742 + AluY SINE Alu 1 296 -15 2115 189 93 124 chr2 89023112 89023524 -161664330 + L1MC4 LINE L1 7572 7945 -97 2165 110 3 0 chr2 89023524 89023815 -161664039 + AluSx SINE Alu 1 292 -20 2115 189 93 124 chr2 89023815 89023911 -161663943 + L1MC4 LINE L1 7945 8042 0 1032 49 0 8 chr2 89024234 89024357 -161663497 - AluY SINE Alu -189 122 1 244 200 0 0 chr2 89024362 89024407 -161663447 - L1MEc LINE L1 -3323 2892 2848 1148 227 92 84 chr2 89024408 89024454 -161663400 - L1MEc LINE L1 -3419 2796 2752 2282 82 20 7 chr2 89024454 89024747 -161663107 + AluSx SINE Alu 1 297 -15 1148 227 92 84 chr2 89024747 89025106 -161662748 - L1MEc LINE L1 -3463 2752 2397 1628 159 52 26 chr2 89025106 89025377 -161662477 - AluSx SINE Alu -34 278 1 1148 227 92 84 chr2 89025377 89025389 -161662465 - L1MEc LINE L1 -3818 2397 2387 2348 105 0 0 chr2 89025389 89025694 -161662160 - AluSc SINE Alu -4 305 1 1148 227 92 84 chr2 89025694 89025984 -161661870 - L1MEc LINE L1 -3828 2387 2101 2098 132 30 0 chr2 89025984 89026280 -161661574 - AluSg SINE Alu -5 305 1 1148 227 92 84 chr2 89026280 89026358 -161661496 - L1MEc LINE L1 -4114 2101 2025 2039 138 0 0 chr2 89026358 89026661 -161661193 - AluSx SINE Alu 0 303 1 1148 227 92 84 chr2 89026661 89026763 -161661091 - L1MEc LINE L1 -4190 2025 1925 2180 105 7 0 chr2 89026764 89027066 -161660788 - AluSx SINE Alu 0 308 5 3161 192 109 30 chr2 89027073 89027290 -161660564 - Cheshire DNA MER1_type -1505 915 717 2402 75 0 3 chr2 89027290 89027583 -161660271 - AluSq SINE Alu -21 292 1 3161 192 109 30 chr2 89027583 89027789 -161660065 - Cheshire DNA MER1_type -1703 717 529 1797 153 146 13 chr2 89027789 89028167 -161659687 + MSTA LTR MaLR 1 428 0 3161 192 109 30 chr2 89028167 89028342 -161659512 - Cheshire DNA MER1_type -1891 529 369 1922 156 55 0 chr2 89028342 89028668 -161659186 + MER7A DNA MER2_type 1 342 -4 3161 192 109 30 chr2 89028668 89028807 -161659047 - Cheshire DNA MER1_type -2051 369 117 736 116 25 8 chr2 89028808 89028929 -161658925 - AluSp/q SINE Alu -12 301 179 2486 48 0 7 chr2 89028935 89029225 -161658629 - AluY SINE Alu -8 303 16 2393 78 3 16 chr2 89029553 89029860 -161657994 + AluSq SINE Alu 1 303 -10 319 179 0 18 chr2 89030689 89030745 -161657109 + Tigger5 DNA MER2_type 1 55 -2268 294 230 0 14 chr2 89030713 89030787 -161657067 + Tigger5 DNA MER2_type 2251 2323 0 * 2399 96 0 6 chr2 89031828 89032142 -161655712 + AluSq SINE Alu 1 312 -1 263 355 16 16 chr2 89032303 89032424 -161655430 + MIR SINE MIR 34 154 -108 901 103 0 0 chr2 89032622 89032739 -161655115 + FLAM_C SINE Alu 2 118 -15 269 26 0 26 chr2 89032748 89032787 -161655067 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 244 326 58 22 chr2 89032872 89033010 -161654844 + MIR SINE MIR 41 183 -79 1841 114 71 4 chr2 89033547 89033828 -161654026 - AluSx SINE Alu -10 302 3 432 55 0 0 chr2 89033857 89033912 -161653942 + (CA)n Simple_repeat Simple_repeat 2 56 0 1600 163 0 67 chr2 89034020 89034333 -161653521 - AluJb SINE Alu -20 292 1 21 0 0 0 chr2 89034431 89034452 -161653402 + AT_rich Low_complexity Low_complexity 1 21 0 372 285 116 23 chr2 89034953 89035150 -161652704 + MIR SINE MIR 14 223 -39 340 306 67 15 chr2 89035272 89035406 -161652448 - L1MC/D LINE L1 -2346 5462 5322 203 0 37 0 chr2 89036133 89036160 -161651694 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 320 0 25 0 chr2 89036159 89036199 -161651655 + (CA)n Simple_repeat Simple_repeat 2 42 0 1657 157 35 3 chr2 89036199 89036485 -161651369 - AluJb SINE Alu -15 297 3 652 153 0 18 chr2 89037366 89037477 -161650377 - FRAM SINE Alu -1 175 67 695 203 0 0 chr2 89037504 89037627 -161650227 - FLAM_A SINE Alu -10 123 1 187 114 45 0 chr2 89037696 89037740 -161650114 + CT-rich Low_complexity Low_complexity 2 47 0 976 120 7 0 chr2 89037756 89037898 -161649956 - AluSp/q SINE Alu -16 297 155 1521 115 0 5 chr2 89037898 89038115 -161649739 - AluSq SINE Alu -97 216 1 206 333 128 8 chr2 89039166 89039283 -161648571 + L2 LINE L2 3133 3263 -9 2407 84 0 0 chr2 89039325 89039635 -161648219 + AluSg SINE Alu 1 310 0 2213 112 0 0 chr2 89040708 89041020 -161646834 - AluSx SINE Alu 0 312 1 270 106 0 0 chr2 89044869 89044916 -161642938 + (CCG)n Simple_repeat Simple_repeat 1 47 0 32 43 0 0 chr2 89044967 89045013 -161642841 + GC_rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr2 89045071 89045099 -161642755 + GC_rich Low_complexity Low_complexity 1 28 0 207 114 0 0 chr2 89045330 89045365 -161642489 + (CA)n Simple_repeat Simple_repeat 1 35 0 763 153 0 0 chr2 89046028 89046152 -161641702 + FLAM_A SINE Alu 3 126 -7 450 36 0 0 chr2 89046495 89046551 -161641303 + (CA)n Simple_repeat Simple_repeat 1 56 0 23 33 0 0 chr2 89046616 89046646 -161641208 + AT_rich Low_complexity Low_complexity 1 30 0 237 284 0 0 chr2 89046934 89047001 -161640853 - L1ME4a LINE L1 -112 6009 5943 1254 200 153 79 chr2 89047137 89047445 -161640409 - MLT1D LTR MaLR 0 505 149 2198 102 0 3 chr2 89047445 89047750 -161640104 + AluSg SINE Alu 1 304 -6 1254 200 153 79 chr2 89047750 89047911 -161639943 - MLT1D LTR MaLR -356 149 1 687 271 128 25 chr2 89047921 89048279 -161639575 + L1ME LINE L1 5412 5806 -315 1795 94 4 0 chr2 89048686 89048930 -161638924 - AluSp SINE Alu 0 313 69 34 0 0 0 chr2 89049088 89049122 -161638732 + AT_rich Low_complexity Low_complexity 1 34 0 2233 86 0 0 chr2 89049122 89049412 -161638442 - AluSc SINE Alu -19 290 1 180 0 0 0 chr2 89049421 89049441 -161638413 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1808 113 14 35 chr2 89049441 89049724 -161638130 - AluSx SINE Alu -27 285 9 237 219 42 67 chr2 89049753 89049872 -161637982 + L1M4 LINE L1 2755 2870 -3276 35 0 0 0 chr2 89049881 89049916 -161637938 + AT_rich Low_complexity Low_complexity 1 35 0 3319 245 65 98 chr2 89049977 89050121 -161637733 + L1M4 LINE L1 3336 3483 -2663 1309 219 10 7 chr2 89050121 89050422 -161637432 + AluJo SINE Alu 1 302 -10 3319 245 65 98 chr2 89050422 89050517 -161637337 + L1M4 LINE L1 3483 3580 -2566 1875 186 99 28 chr2 89050517 89050953 -161636901 + MLT1C LTR MaLR 1 467 0 3319 245 65 98 chr2 89050953 89051111 -161636743 + L1M4 LINE L1 3580 3742 -2404 294 103 0 0 chr2 89051111 89051150 -161636704 - AluSx SINE Alu -11 290 252 1779 155 0 0 chr2 89051150 89051427 -161636427 - AluSx SINE Alu -35 277 1 3319 245 65 98 chr2 89051427 89051478 -161636376 + L1M4 LINE L1 3741 3792 -2354 489 205 107 9 chr2 89051478 89051590 -161636264 + FLAM_C SINE Alu 2 124 -9 3319 245 65 98 chr2 89051590 89052014 -161635840 + L1M4 LINE L1 3792 4228 -1918 2152 120 7 0 chr2 89052014 89052323 -161635531 + AluSx SINE Alu 1 311 -1 1852 120 42 0 chr2 89052325 89052609 -161635245 + AluSq SINE Alu 1 296 -17 3319 245 65 98 chr2 89052609 89053042 -161634812 + L1M4 LINE L1 4229 4675 -1471 219 36 0 0 chr2 89053042 89053070 -161634784 + (TG)n Simple_repeat Simple_repeat 2 29 0 3319 245 65 98 chr2 89053070 89053103 -161634751 + L1M4 LINE L1 4675 4708 -1438 2750 180 12 30 chr2 89053103 89053671 -161634183 + MER74A LTR ERVL 1 558 0 3319 245 65 98 chr2 89053671 89053744 -161634110 + L1M4 LINE L1 4708 4782 -1364 1838 132 7 32 chr2 89053744 89054054 -161633800 - AluSx SINE Alu -6 306 5 3319 245 65 98 chr2 89054054 89054458 -161633396 + L1M4 LINE L1 4782 5198 -948 1500 141 123 15 chr2 89054458 89054727 -161633127 + AluJb SINE Alu 3 300 -12 3319 245 65 98 chr2 89054727 89054752 -161633102 + L1M4 LINE L1 5198 5222 -924 1906 99 0 28 chr2 89054752 89055035 -161632819 - AluSg SINE Alu 0 310 36 3319 245 65 98 chr2 89055035 89055279 -161632575 + L1M4 LINE L1 5222 5401 -745 265 200 0 0 chr2 89055283 89055333 -161632521 + L2 LINE L2 3263 3312 -1 2219 84 7 0 chr2 89055369 89055665 -161632189 - AluSg SINE Alu -12 298 1 1035 75 0 0 chr2 89055665 89055798 -161632056 - AluSg SINE Alu -177 133 1 324 331 39 47 chr2 89057512 89057639 -161630215 + MIR SINE MIR 16 141 -67 372 22 0 0 chr2 89057988 89058033 -161629821 + (CA)n Simple_repeat Simple_repeat 2 46 0 27 0 0 0 chr2 89058126 89058153 -161629701 + AT_rich Low_complexity Low_complexity 1 27 0 180 0 0 0 chr2 89058293 89058313 -161629541 + (TG)n Simple_repeat Simple_repeat 2 21 0 1128 301 12 21 chr2 89058313 89058639 -161629215 - LTR16A LTR ERVL -112 338 16 3602 330 44 41 chr2 89058846 89059468 -161628386 - ERVL LTR ERVL -456 5308 4689 2079 127 3 0 chr2 89059468 89059768 -161628086 - AluSg SINE Alu -9 301 1 3602 330 44 41 chr2 89059768 89060493 -161627361 - ERVL LTR ERVL -1075 4689 3951 1047 217 32 0 chr2 89060493 89060710 -161627144 + MER58A DNA MER1_type 1 224 0 3602 330 44 41 chr2 89060710 89061354 -161626500 - ERVL LTR ERVL -1813 3951 3310 700 303 14 29 chr2 89061411 89061842 -161626012 - ERVL LTR ERVL -2503 3151 2658 575 91 0 0 chr2 89061844 89061921 -161625933 + MLT1F LTR MaLR 3 79 -488 1525 193 71 0 chr2 89061921 89062201 -161625653 + MLT1F LTR MaLR 186 485 -57 302 313 104 28 chr2 89062352 89062534 -161625320 + LTR16C LTR ERVL 287 482 -9 1829 139 10 3 chr2 89062629 89062917 -161624937 + AluSx SINE Alu 1 290 -22 370 279 9 76 chr2 89062935 89063044 -161624810 + L1MC4a LINE L1 4089 4204 -1942 2430 71 0 0 chr2 89063044 89063355 -161624499 + AluY SINE Alu 1 311 0 370 279 9 76 chr2 89063355 89063486 -161624368 + L1MC4a LINE L1 4204 4342 -1804 1957 122 7 0 chr2 89063486 89063765 -161624089 + AluSp SINE Alu 1 281 -32 180 0 0 0 chr2 89063768 89063788 -161624066 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 370 279 9 76 chr2 89063788 89063852 -161624002 + L1MC4a LINE L1 4344 4373 -1773 2108 102 3 0 chr2 89063867 89064162 -161623692 + AluSx SINE Alu 12 307 -5 327 310 33 5 chr2 89064194 89064378 -161623476 + L1MC4a LINE L1 4381 4569 -1577 1298 177 4 0 chr2 89064484 89064710 -161623144 + AluJb SINE Alu 84 310 -2 252 269 76 17 chr2 89064719 89064838 -161623016 + L1MC4a LINE L1 4683 4808 -1338 2779 10 0 0 chr2 89064872 89065181 -161622673 - AluYb8 SINE Alu -8 310 2 266 322 65 26 chr2 89065189 89065419 -161622435 + L1MC4a LINE L1 4900 5138 -1008 2007 252 84 26 chr2 89065545 89065638 -161622216 + L1MC4a LINE L1 5254 5340 -2468 1613 162 3 24 chr2 89065638 89065935 -161621919 + AluJo SINE Alu 1 291 -21 2007 252 84 26 chr2 89065935 89065983 -161621871 + L1MC4a LINE L1 5340 5384 -2424 2115 95 14 0 chr2 89065983 89066148 -161621706 - AluSx SINE Alu -13 299 127 372 22 0 0 chr2 89066148 89066193 -161621661 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 2115 95 14 0 chr2 89066193 89066322 -161621532 - AluSx SINE Alu -185 127 1 2007 252 84 26 chr2 89066322 89066842 -161621012 + L1MC4a LINE L1 5384 5955 -1853 24 32 0 0 chr2 89066842 89066873 -161620981 + AT_rich Low_complexity Low_complexity 1 31 0 2077 168 75 77 chr2 89066899 89066935 -161620919 - Charlie6 DNA MER1_type 0 3500 3465 1688 157 3 17 chr2 89066935 89067229 -161620625 - AluJo SINE Alu -13 299 10 2077 168 75 77 chr2 89067229 89067383 -161620471 - Charlie6 DNA MER1_type -35 3465 3312 2211 106 6 0 chr2 89067383 89067694 -161620160 - AluSp SINE Alu 0 313 1 2077 168 75 77 chr2 89067694 89068074 -161619780 - Charlie6 DNA MER1_type -188 3312 2930 3678 180 66 26 chr2 89068074 89068163 -161619691 - L1MB7 LINE L1 -32 6152 6068 2277 84 0 0 chr2 89068163 89068459 -161619395 - AluSc SINE Alu -13 296 1 3678 180 66 26 chr2 89068459 89069169 -161618685 - L1MB7 LINE L1 -116 6068 5321 1605 180 39 0 chr2 89069176 89069459 -161618395 - AluJo SINE Alu -18 294 1 487 174 11 0 chr2 89069476 89069568 -161618286 - L1MB3 LINE L1 -7 6176 6084 3338 200 20 26 chr2 89069569 89070373 -161617481 - L1MB7 LINE L1 -816 5330 4532 1879 147 3 0 chr2 89070406 89070706 -161617148 + AluSq SINE Alu 1 301 -12 2545 51 0 0 chr2 89071160 89071471 -161616383 + AluY SINE Alu 1 311 0 4370 231 38 12 chr2 89071600 89071872 -161615982 - L1MB7 LINE L1 -1609 4537 4274 1915 89 40 33 chr2 89071872 89072174 -161615680 - AluY SINE Alu -5 306 3 4370 231 38 12 chr2 89072174 89073083 -161614771 - L1MB7 LINE L1 -1872 4274 3325 1143 188 85 53 chr2 89073092 89073275 -161614579 - AluJo SINE Alu -8 304 107 2703 0 0 0 chr2 89073275 89073571 -161614283 - AluY SINE Alu 0 311 16 1143 188 85 53 chr2 89073571 89073669 -161614185 - AluJo SINE Alu -205 107 14 2425 73 0 0 chr2 89073692 89073994 -161613860 - AluSc SINE Alu -7 302 1 1432 215 16 41 chr2 89073994 89074263 -161613591 - L1MB7 LINE L1 -2801 3345 3090 1931 151 0 3 chr2 89074263 89074561 -161613293 - AluJb SINE Alu -15 297 1 1432 215 16 41 chr2 89074561 89074733 -161613121 - L1MB7 LINE L1 -3056 3090 2915 2113 108 0 3 chr2 89074740 89075035 -161612819 - AluSg SINE Alu -16 294 1 298 81 0 0 chr2 89075053 89075090 -161612764 + Alu SINE Alu 2 38 -265 1195 219 70 50 chr2 89075235 89075619 -161612235 + L1M4 LINE L1 4663 5054 -1092 2475 52 0 3 chr2 89076773 89077079 -161610775 + AluY SINE Alu 1 305 -6 246 189 0 108 chr2 89077537 89077611 -161610243 + MIR SINE MIR 77 142 -120 947 164 0 0 chr2 89077618 89077777 -161610077 + FRAM SINE Alu 1 159 -17 232 175 0 0 chr2 89077810 89077850 -161610004 + MIR SINE MIR 221 260 -2 282 304 33 32 chr2 89077975 89078177 -161609677 + MIR SINE MIR 7 205 -57 287 365 9 0 chr2 89079136 89079251 -161608603 - L3 LINE CR1 -458 1119 1004 409 207 0 11 chr2 89079918 89080005 -161607849 + MLT1J2 LTR MaLR 34 119 -331 328 225 139 96 chr2 89080016 89080062 -161607792 + MLT1J2 LTR MaLR 223 266 -184 662 132 204 0 chr2 89080062 89080214 -161607640 + MER5A DNA MER1_type 5 187 -2 328 225 139 96 chr2 89080214 89080354 -161607500 + MLT1J2 LTR MaLR 266 417 -33 449 325 10 27 chr2 89082150 89082336 -161605518 + MIR SINE MIR 62 242 -20 771 130 0 65 chr2 89082670 89082808 -161605046 + FLAM_C SINE Alu 5 133 0 835 185 87 6 chr2 89083559 89083732 -161604122 + MER5A DNA MER1_type 2 188 -1 193 277 31 15 chr2 89084338 89084403 -161603451 + MIR SINE MIR 87 152 -110 338 220 197 60 chr2 89085147 89085305 -161602549 + L1ME4a LINE L1 5849 6046 -75 2120 135 3 3 chr2 89085305 89085616 -161602238 - AluJo SINE Alu -1 311 1 338 220 197 60 chr2 89085616 89085675 -161602179 + L1ME4a LINE L1 6046 6096 -25 1351 179 23 63 chr2 89085717 89086029 -161601825 + MLT1A1 LTR MaLR 31 329 -36 2399 105 0 0 chr2 89086029 89086334 -161601520 - AluSx SINE Alu -7 305 1 1351 179 23 63 chr2 89086334 89086368 -161601486 + MLT1A1 LTR MaLR 329 363 -2 231 333 135 28 chr2 89086552 89086693 -161601161 + L3 LINE CR1 1328 1483 -94 1696 185 116 17 chr2 89088628 89089004 -161598850 + L1MB7 LINE L1 5720 6144 -40 2401 85 0 0 chr2 89089004 89089298 -161598556 + AluSg SINE Alu 1 294 -16 1696 185 116 17 chr2 89089298 89089343 -161598511 + L1MB7 LINE L1 6144 6183 -1 414 244 22 22 chr2 89089353 89089443 -161598411 + FLAM_A SINE Alu 2 91 -51 576 275 161 50 chr2 89089996 89090313 -161597541 - L2 LINE L2 0 3313 3033 2357 80 10 0 chr2 89090313 89090613 -161597241 + AluSx SINE Alu 1 303 -9 576 275 161 50 chr2 89090613 89090794 -161597060 - L2 LINE L2 -280 3033 2749 301 324 51 57 chr2 89091175 89091351 -161596503 - MIR SINE MIR -53 209 35 249 194 0 90 chr2 89091367 89091434 -161596420 + MER116 DNA Mariner 9 69 -11 307 273 122 28 chr2 89091563 89091701 -161596153 + MER5A DNA MER1_type 6 163 -23 2416 99 32 0 chr2 89091711 89092055 -161595799 + THE1B LTR MaLR 3 357 -7 201 121 0 0 chr2 89092396 89092429 -161595425 + (GA)n Simple_repeat Simple_repeat 2 34 0 1015 124 0 0 chr2 89093552 89093689 -161594165 + FRAM SINE Alu 38 174 -2 2275 109 3 0 chr2 89094119 89094413 -161593441 + AluSx SINE Alu 1 295 -17 3772 160 62 23 chr2 89094654 89094816 -161593038 - L1MA10 LINE L1 -1 6333 6179 279 0 0 0 chr2 89094816 89094847 -161593007 + (TG)n Simple_repeat Simple_repeat 2 32 0 3772 160 62 23 chr2 89094847 89095151 -161592703 - L1MA10 LINE L1 -155 6179 5888 2000 166 0 3 chr2 89095151 89095459 -161592395 - AluJb SINE Alu -5 307 1 3772 160 62 23 chr2 89095459 89095739 -161592115 - L1MA10 LINE L1 -446 5888 5557 1383 71 0 27 chr2 89095954 89096137 -161591717 + AluY SINE Alu 118 295 -16 662 250 57 60 chr2 89097009 89097309 -161590545 + L1MD2 LINE L1 6060 6358 -1 580 239 96 15 chr2 89097913 89098110 -161589744 - Charlie4 DNA MER1_type 0 1961 1749 708 195 67 46 chr2 89098277 89098472 -161589382 - Charlie4 DNA MER1_type -1762 199 1 1829 113 13 179 chr2 89098977 89099445 -161588409 + MLT1B LTR MaLR 1 390 0 989 175 0 27 chr2 89099773 89099956 -161587898 + MER5B DNA MER1_type 1 178 0 191 250 0 21 chr2 89100696 89100744 -161587110 - MER5B DNA MER1_type -41 137 91 1138 131 0 38 chr2 89100768 89100951 -161586903 - FRAM SINE Alu 0 176 1 1932 143 13 10 chr2 89102169 89102470 -161585384 - AluJb SINE Alu -10 302 1 1316 125 16 5 chr2 89102515 89102707 -161585147 + AluSx SINE Alu 1 194 -118 391 233 192 21 chr2 89102785 89102971 -161584883 + L1ME1 LINE L1 5946 6148 -18 225 122 0 49 chr2 89105159 89105200 -161582654 + (GGGGA)n Simple_repeat Simple_repeat 3 41 0 534 291 63 14 chr2 89105511 89105724 -161582130 + MIR SINE MIR 26 256 -6 434 235 96 22 chr2 89105781 89105917 -161581937 + MIR3 SINE MIR 36 181 -27 795 149 14 21 chr2 89105980 89106121 -161581733 - MER20 DNA MER1_type 0 219 80 338 185 15 0 chr2 89106160 89106225 -161581629 - MER20 DNA MER1_type -148 71 6 2055 97 293 3 chr2 89107521 89107893 -161579961 - LTR12 LTR ERV1 -234 480 1 2136 134 7 0 chr2 89107925 89108215 -161579639 + AluSg SINE Alu 2 293 -17 377 202 111 0 chr2 89108532 89108631 -161579223 - MER103 DNA DNA -4 162 53 2559 70 0 0 chr2 89109398 89109698 -161578156 + AluY SINE Alu 1 300 -11 333 183 113 0 chr2 89109776 89109847 -161578007 - MIR SINE MIR -30 232 154 2333 123 0 0 chr2 89110304 89110614 -161577240 + AluSx SINE Alu 1 310 -2 2089 225 39 87 chr2 89110721 89111161 -161576693 + L1MC5 LINE L1 6651 7034 -927 893 279 0 22 chr2 89111161 89111390 -161576464 - MER58A DNA MER1_type 0 224 1 2089 225 39 87 chr2 89111390 89111776 -161576078 + L1MC5 LINE L1 7034 7437 -524 1703 140 42 4 chr2 89112572 89112836 -161575018 - AluJo SINE Alu -38 274 1 441 0 0 0 chr2 89113273 89113322 -161574532 + (CA)n Simple_repeat Simple_repeat 1 49 0 2019 136 0 23 chr2 89113782 89114091 -161573763 - AluJb SINE Alu -10 302 1 252 264 28 14 chr2 89115260 89115332 -161572522 - L2 LINE L2 -6 3307 3235 936 254 165 17 chr2 89115689 89116094 -161571760 - MER115 DNA AcHobo -4 689 225 354 261 54 0 chr2 89116121 89116232 -161571622 - MER115 DNA AcHobo -568 125 9 607 229 48 7 chr2 89116357 89116507 -161571347 - MIR SINE MIR -63 145 34 30 0 0 0 chr2 89117139 89117169 -161570685 + AT_rich Low_complexity Low_complexity 1 30 0 1311 170 0 5 chr2 89117229 89117429 -161570425 - AluJo SINE Alu -27 285 87 2102 102 39 7 chr2 89117451 89117736 -161570118 - AluSx SINE Alu -18 294 1 261 157 0 20 chr2 89117738 89117789 -161570065 - L1ME3 LINE L1 -73 6089 6040 358 300 91 0 chr2 89119403 89119513 -161568341 - L3 LINE CR1 -96 1481 1362 410 294 49 38 chr2 89120523 89120707 -161567147 + MIR SINE MIR 34 219 -43 1911 163 0 7 chr2 89122366 89122654 -161565200 - AluJb SINE Alu -26 286 1 234 247 91 39 chr2 89122889 89122966 -161564888 + MIR SINE MIR 36 116 -92 2364 82 3 0 chr2 89123708 89124001 -161563853 + AluSx SINE Alu 1 294 -18 841 187 48 0 chr2 89124176 89124342 -161563512 - MER63B DNA MER1_type -262 174 1 470 253 71 18 chr2 89124443 89124613 -161563241 - MIR SINE MIR 0 262 84 182 167 0 0 chr2 89125467 89125497 -161562357 - L2 LINE L2 -6 3307 3278 571 234 119 0 chr2 89126010 89126167 -161561687 + MER5A DNA MER1_type 4 183 -6 285 309 16 48 chr2 89127865 89127991 -161559863 + MIR SINE MIR 93 214 -48 2482 66 0 22 chr2 89128594 89128912 -161558942 - AluY SINE Alu 0 311 1 2941 243 118 10 chr2 89129389 89130373 -161557481 + L2 LINE L2 1888 2977 -337 197 329 0 26 chr2 89130637 89130713 -161557141 + L2 LINE L2 3194 3267 -5 2346 105 13 0 chr2 89132698 89133004 -161554850 + AluSq SINE Alu 1 310 -3 197 222 22 0 chr2 89133097 89133142 -161554712 - L2 LINE L2 -6 3266 3221 2132 98 23 39 chr2 89133648 89133954 -161553900 - AluSx SINE Alu -11 301 1 222 210 0 111 chr2 89134146 89134227 -161553627 - MIR SINE MIR -82 180 109 981 201 90 47 chr2 89134251 89134468 -161553386 + MER33 DNA MER1_type 11 246 -2339 2172 99 0 10 chr2 89134468 89134780 -161553074 - AluSx SINE Alu 0 312 4 981 201 90 47 chr2 89134780 89134861 -161552993 + MER33 DNA MER1_type 246 322 -2 1208 160 5 15 chr2 89135405 89135666 -161552188 + AluSg/x SINE Alu 82 340 0 490 297 125 35 chr2 89135669 89135925 -161551929 + L2 LINE L2 3035 3313 0 1606 158 32 7 chr2 89138288 89138566 -161549288 - AluJo SINE Alu -27 285 1 784 174 0 15 chr2 89138573 89138705 -161549149 - FLAM_C SINE Alu -12 131 2 2247 101 0 0 chr2 89140010 89140317 -161547537 + AluSc SINE Alu 1 307 -2 1541 221 102 10 chr2 89140390 89140792 -161547062 + L1ME1 LINE L1 5664 6102 -64 2203 108 0 0 chr2 89140830 89141127 -161546727 + AluSc SINE Alu 1 297 -12 1801 141 10 7 chr2 89141214 89141519 -161546335 + AluJo SINE Alu 5 310 -2 201 243 108 40 chr2 89141989 89142063 -161545791 + L2 LINE L2 3235 3313 0 467 329 27 0 chr2 89142419 89142565 -161545289 - MIR SINE MIR -25 237 88 411 313 40 55 chr2 89143694 89143809 -161544045 + L1ME4a LINE L1 5492 5607 -514 2150 103 0 3 chr2 89143809 89144100 -161543754 + AluSq SINE Alu 1 290 -23 411 313 40 55 chr2 89144100 89144259 -161543595 + L1ME4a LINE L1 5607 5762 -359 260 222 16 0 chr2 89144277 89144340 -161543514 + L1ME4a LINE L1 5851 5914 -207 1669 155 3 7 chr2 89144424 89144714 -161543140 - AluJb SINE Alu -19 293 5 2207 75 0 7 chr2 89145086 89145379 -161542475 - AluSc SINE Alu -18 291 1 2314 73 0 19 chr2 89145394 89145710 -161542144 - AluY SINE Alu -1 310 1 225 271 49 74 chr2 89145717 89145839 -161542015 + L2 LINE L2 2777 2895 -419 1652 171 0 4 chr2 89146031 89146306 -161541548 - AluJb SINE Alu -38 274 1 1993 129 13 0 chr2 89146427 89146730 -161541124 - AluJo SINE Alu -5 307 1 525 214 58 132 chr2 89147927 89148071 -161539783 + MIR SINE MIR 1 121 -141 14432 58 7 1 chr2 89148071 89150649 -161537205 + L1PA6 LINE L1 3556 6148 -6 525 214 58 132 chr2 89150649 89150747 -161537107 + MIR SINE MIR 121 225 -37 1542 159 85 7 chr2 89151084 89151354 -161536500 + AluJo SINE Alu 1 291 -21 1622 209 152 124 chr2 89151358 89151755 -161536099 - L1MC5 LINE L1 -45 7916 7532 1824 146 7 7 chr2 89151755 89152057 -161535797 - AluJb SINE Alu -10 302 1 2055 93 7 0 chr2 89152067 89152385 -161535469 - AluSq SINE Alu 0 320 1 1622 209 152 124 chr2 89152385 89152663 -161535191 - L1MC5 LINE L1 -437 7524 7255 1811 196 30 38 chr2 89152663 89153062 -161534792 + MSTD LTR MaLR 1 396 0 1622 209 152 124 chr2 89153062 89153643 -161534211 - L1MC5 LINE L1 -706 7255 6611 1934 107 18 4 chr2 89153781 89154062 -161533792 + AluSc SINE Alu 1 285 -24 24 32 0 0 chr2 89154062 89154093 -161533761 + AT_rich Low_complexity Low_complexity 1 31 0 775 218 25 73 chr2 89154368 89154643 -161533211 - L1MC4 LINE L1 0 8042 7781 848 154 0 22 chr2 89154711 89154847 -161533007 - FLAM_C SINE Alu 0 133 1 397 253 263 20 chr2 89154873 89155228 -161532626 - L1ME LINE L1 -301 5869 5410 1504 168 43 4 chr2 89155283 89155563 -161532291 - AluJo SINE Alu -21 291 1 1833 142 7 3 chr2 89155890 89156216 -161531638 + AluJb SINE Alu 2 328 0 240 281 190 16 chr2 89156351 89156472 -161531382 - L2 LINE L2 -5 3308 3167 1230 156 29 42 chr2 89156514 89156752 -161531102 + MER46A DNA MER2_type 1 235 -1 238 298 82 82 chr2 89157530 89157738 -161530116 + L2 LINE L2 3004 3211 -61 210 108 54 0 chr2 89158650 89158687 -161529167 + C-rich Low_complexity Low_complexity 3 41 0 218 344 154 1 chr2 89159139 89159327 -161528527 - MIR SINE MIR -10 252 39 728 212 57 26 chr2 89159722 89159915 -161527939 - L1ME3 LINE L1 -39 6123 5925 206 287 210 14 chr2 89161802 89161945 -161525909 + L2 LINE L2 2919 3089 -183 409 279 149 25 chr2 89162021 89162182 -161525672 - MIR SINE MIR -34 228 48 419 275 117 6 chr2 89162247 89162326 -161525528 - Charlie8 DNA MER1_type -132 209 140 2373 87 0 0 chr2 89162326 89162635 -161525219 - AluSx SINE Alu -3 309 1 419 275 117 6 chr2 89162635 89162726 -161525128 - Charlie8 DNA MER1_type -201 140 20 444 291 31 41 chr2 89162936 89163132 -161524722 - MIR SINE MIR -7 255 62 690 223 38 90 chr2 89163511 89163722 -161524132 + MIR SINE MIR 63 262 0 188 254 85 17 chr2 89164562 89164621 -161523233 + MER5B DNA MER1_type 72 134 -44 195 245 38 19 chr2 89164764 89164817 -161523037 - MER5A DNA MER1_type -98 91 38 226 206 0 0 chr2 89164819 89164853 -161523001 - Charlie1 DNA MER1_type -2727 34 1 228 315 86 49 chr2 89165894 89166056 -161521798 + L2 LINE L2 2989 3156 -157 1599 124 115 90 chr2 89166151 89166237 -161521617 - MER47A DNA MER2_type -1957 366 284 2184 75 0 0 chr2 89166237 89166516 -161521338 + AluY SINE Alu 1 279 -32 1599 124 115 90 chr2 89166516 89166785 -161521069 - MER47A DNA MER2_type -2039 284 2 203 226 0 57 chr2 89166806 89166859 -161520995 + (CCCA)n Simple_repeat Simple_repeat 2 51 0 241 241 196 27 chr2 89167682 89167794 -161520060 + L2 LINE L2 3182 3312 -1 1667 121 70 15 chr2 89168634 89168906 -161518948 + AluSx SINE Alu 15 301 -11 692 154 0 0 chr2 89169409 89169513 -161518341 - U6 snRNA snRNA -1 106 3 277 279 203 47 chr2 89169594 89169762 -161518092 + L1MC/D LINE L1 5405 5545 -2263 731 172 9 0 chr2 89169762 89169899 -161517955 + FLAM_A SINE Alu 1 138 0 277 279 203 47 chr2 89169899 89170136 -161517718 + L1MC/D LINE L1 5545 5876 -1932 2060 119 10 16 chr2 89170645 89170993 -161516861 - AluJo SINE Alu 0 349 4 2349 60 0 7 chr2 89171306 89171604 -161516250 + AluY SINE Alu 1 296 -15 2149 176 7 49 chr2 89171807 89172179 -161515675 + L1MB7 LINE L1 4962 5308 -876 1929 127 10 7 chr2 89172179 89172503 -161515351 + AluSx SINE Alu 3 327 0 2149 176 7 49 chr2 89172503 89172829 -161515025 + L1MB7 LINE L1 5308 5646 -538 4412 123 27 56 chr2 89172829 89173211 -161514643 + Tigger2 DNA MER2_type 1 350 -2368 2042 122 3 10 chr2 89173211 89173522 -161514332 - AluSx SINE Alu -3 309 1 4412 123 27 56 chr2 89173522 89173920 -161513934 + Tigger2 DNA MER2_type 350 758 -1960 748 105 9 6 chr2 89173960 89174176 -161513678 + Tigger2 DNA MER2_type 2468 2716 -2 2615 162 73 6 chr2 89174176 89174669 -161513185 + L1MB7 LINE L1 5643 6168 -16 955 206 0 11 chr2 89174777 89174957 -161512897 - MER5B DNA MER1_type 0 178 1 1391 151 35 0 chr2 89175557 89175789 -161512065 - AluJo SINE Alu -7 305 66 1794 99 43 0 chr2 89177034 89177287 -161510567 - AluSq SINE Alu -24 289 26 191 315 81 18 chr2 89177588 89177699 -161510155 + MIR SINE MIR 73 190 -72 453 211 179 51 chr2 89177717 89177770 -161510084 - MER5B DNA MER1_type -2 176 131 837 182 0 0 chr2 89177770 89177902 -161509952 + FLAM_C SINE Alu 1 132 -1 453 211 179 51 chr2 89177902 89178004 -161509850 - MER5B DNA MER1_type -47 131 1 727 203 8 0 chr2 89178046 89178174 -161509680 + FLAM_A SINE Alu 1 129 -4 353 279 44 22 chr2 89178408 89178544 -161509310 + LTR67 LTR ERVL 417 555 -2 2051 136 0 0 chr2 89178593 89178902 -161508952 + AluJb SINE Alu 1 309 -3 191 88 29 0 chr2 89178905 89178939 -161508915 + (CAAG)n Simple_repeat Simple_repeat 2 36 0 823 200 0 19 chr2 89178978 89179133 -161508721 - AluJb SINE Alu -21 291 140 946 274 42 12 chr2 89179143 89179384 -161508470 - MIR SINE MIR -10 252 5 1503 82 0 5 chr2 89179996 89180191 -161507663 - AluSx SINE Alu -115 197 4 982 183 64 1 chr2 89180465 89180709 -161507145 - L1MD3 LINE L1 0 8033 7795 287 67 0 0 chr2 89180764 89180809 -161507045 - HY3 scRNA scRNA -1 100 56 393 259 0 0 chr2 89180809 89180894 -161506960 - L1MC4 LINE L1 -266 7776 7692 836 131 0 23 chr2 89180907 89181037 -161506817 - FLAM_C SINE Alu -16 127 1 1381 150 58 51 chr2 89181454 89181748 -161506106 + AluJo SINE Alu 4 299 -13 1754 138 47 3 chr2 89181757 89182053 -161505801 + AluSx SINE Alu 1 309 -3 222 272 128 80 chr2 89182058 89182183 -161505671 - MIR SINE MIR -45 217 87 2083 107 7 0 chr2 89182595 89182884 -161504970 - AluSq SINE Alu -11 302 12 309 236 157 0 chr2 89183518 89183607 -161504247 + MIR SINE MIR 64 166 -96 226 228 261 33 chr2 89184280 89184372 -161503482 - L2 LINE L2 -1 3271 3159 23 0 0 0 chr2 89185712 89185735 -161502119 + AT_rich Low_complexity Low_complexity 1 23 0 2267 213 35 10 chr2 89185965 89186473 -161501381 - L1MD2 LINE L1 -10 6349 5829 1505 227 11 3 chr2 89186574 89186926 -161500928 - L1M4 LINE L1 -3372 2774 2420 3765 230 31 54 chr2 89186926 89187601 -161500253 - Charlie6 DNA MER1_type -2098 1402 713 578 172 60 67 chr2 89187601 89187735 -161500119 + FLAM_A SINE Alu 1 133 0 2138 144 0 0 chr2 89187740 89188046 -161499808 + AluSx SINE Alu 7 312 0 3765 230 31 54 chr2 89188046 89188459 -161499395 - Charlie6 DNA MER1_type -2791 709 333 1041 183 64 103 chr2 89188467 89188505 -161499349 + MLT1F1 LTR MaLR 1 39 -528 2337 88 0 7 chr2 89188505 89188801 -161499053 + AluSx SINE Alu 13 306 -6 1041 183 64 103 chr2 89188801 89188940 -161498914 + MLT1F1 LTR MaLR 39 163 -404 1652 180 0 3 chr2 89188940 89189223 -161498631 + AluJo SINE Alu 14 295 -17 1041 183 64 103 chr2 89189223 89189356 -161498498 + MLT1F1 LTR MaLR 163 300 -267 893 34 0 34 chr2 89189368 89189485 -161498369 + SVA Other Other 1271 1383 -3 1042 177 82 32 chr2 89189498 89189718 -161498136 + MLT1F1 LTR MaLR 337 567 0 538 239 31 0 chr2 89189725 89189855 -161497999 - Charlie6 DNA MER1_type -3175 325 192 395 245 0 20 chr2 89189847 89189945 -161497909 - MLT1H LTR MaLR -377 172 77 * 300 247 49 0 chr2 89189942 89190023 -161497831 - Charlie6 DNA MER1_type -2210 1290 1206 * 6556 24 0 1 chr2 89190023 89190771 -161497083 + L1PA3 LINE L1 5409 6155 0 216 0 0 0 chr2 89190835 89190859 -161496995 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 343 195 52 13 chr2 89190951 89191028 -161496826 - MLT1H LTR MaLR -468 81 2 497 239 9 0 chr2 89191033 89191146 -161496708 + L1MC4 LINE L1 6877 6990 -1052 297 232 58 52 chr2 89191145 89191176 -161496678 + L1MC5 LINE L1 7759 7788 -173 * 1882 155 3 25 chr2 89191176 89191493 -161496361 + AluJb SINE Alu 3 312 0 297 232 58 52 chr2 89191493 89191616 -161496238 + L1MC5 LINE L1 7788 7914 -47 1625 198 122 0 chr2 89191818 89192171 -161495683 - MSTD LTR MaLR 0 396 1 370 292 55 61 chr2 89192640 89192722 -161495132 - L1ME4a LINE L1 -229 5892 5811 2082 132 7 0 chr2 89192722 89193011 -161494843 - AluSq SINE Alu -22 291 1 370 292 55 61 chr2 89193011 89193240 -161494614 - L1ME4a LINE L1 -310 5811 5583 1973 136 10 10 chr2 89193288 89193590 -161494264 - AluJo SINE Alu -10 302 1 2168 112 3 3 chr2 89194094 89194398 -161493456 - AluSc SINE Alu -5 304 1 468 264 129 13 chr2 89194853 89195008 -161492846 + MER5B DNA MER1_type 4 176 -2 323 314 25 25 chr2 89195404 89195522 -161492332 + MER5A DNA MER1_type 71 188 -1 256 270 56 11 chr2 89195602 89195691 -161492163 + HAL1 LINE L1 939 1031 -1476 1749 186 17 3 chr2 89195788 89196089 -161491765 - AluJo SINE Alu -5 307 3 558 211 41 8 chr2 89196094 89196217 -161491637 - FLAM_C SINE Alu -5 128 2 2276 88 3 3 chr2 89196229 89196526 -161491328 - AluSq SINE Alu -16 297 1 242 245 29 49 chr2 89196532 89196634 -161491220 + HAL1 LINE L1 1565 1664 -843 516 252 77 86 chr2 89196686 89197035 -161490819 + HAL1 LINE L1 1837 2182 -325 5098 49 11 2 chr2 89197154 89197783 -161490071 + L1PA8 LINE L1 5537 6171 -1 2047 165 42 21 chr2 89197857 89198282 -161489572 + L1MB8 LINE L1 5745 6178 0 3611 163 15 39 chr2 89198288 89198957 -161488897 + L1MC1 LINE L1 5619 6271 -62 682 188 70 0 chr2 89198961 89199089 -161488765 + L1MC1 LINE L1 6197 6333 0 460 315 94 49 chr2 89199147 89199475 -161488379 - L1MCa LINE L1 -1089 1401 965 2375 81 0 13 chr2 89199475 89199785 -161488069 - AluY SINE Alu -5 306 1 460 315 94 49 chr2 89199785 89199893 -161487961 - L1MCa LINE L1 -1525 965 863 2083 96 21 110 chr2 89199903 89200322 -161487532 - L1MD1 LINE L1 -12 6230 5849 1005 229 16 59 chr2 89200324 89200629 -161487225 - L1M4 LINE L1 -2169 3977 3686 387 306 38 19 chr2 89200724 89200881 -161486973 - L1MCa LINE L1 -5399 720 561 957 111 0 23 chr2 89201102 89201273 -161486581 + (TTCC)n Simple_repeat Simple_repeat 2 168 0 693 315 103 20 chr2 89201341 89201814 -161486040 + L1ME3A LINE L1 5435 5948 -222 1861 240 89 34 chr2 89202267 89202829 -161485025 + MLT1E LTR MaLR 1 593 0 1062 266 14 30 chr2 89202829 89203272 -161484582 + MLT1E-int LTR MaLR 1 518 -907 2468 93 0 0 chr2 89203272 89203583 -161484271 + AluY SINE Alu 1 311 0 1062 266 14 30 chr2 89203583 89203662 -161484192 + MLT1E-int LTR MaLR 518 597 -828 1631 188 4 4 chr2 89203679 89203955 -161483899 + AluJb SINE Alu 1 276 -36 1798 69 0 17 chr2 89203957 89204190 -161483664 - AluY SINE Alu -2 309 81 2296 88 0 3 chr2 89204310 89204618 -161483236 + AluY SINE Alu 1 307 -4 427 307 8 0 chr2 89204765 89204892 -161482962 + MLT1E-int LTR MaLR 756 883 -488 760 268 35 109 chr2 89204991 89205450 -161482404 + MLT1E-int LTR MaLR 947 1371 0 276 268 12 24 chr2 89205450 89205532 -161482322 + MLT1E LTR MaLR 1 81 -512 716 223 94 39 chr2 89206739 89206938 -161480916 + MIR SINE MIR 12 227 -35 2471 65 20 0 chr2 89206938 89207230 -161480624 - AluSg SINE Alu -12 298 1 716 223 94 39 chr2 89207230 89207263 -161480591 + MIR SINE MIR 227 257 -5 392 264 56 62 chr2 89208165 89208343 -161479511 + MIR SINE MIR 78 254 -8 833 154 7 21 chr2 89208343 89208486 -161479368 + FLAM_C SINE Alu 1 141 -2 21 0 0 0 chr2 89208690 89208711 -161479143 + AT_rich Low_complexity Low_complexity 1 21 0 1237 102 64 55 chr2 89208867 89209070 -161478784 + L1MB4 LINE L1 5925 6132 -48 2134 124 7 3 chr2 89209070 89209376 -161478478 + AluSp SINE Alu 1 307 -6 1237 102 64 55 chr2 89209376 89209408 -161478446 + L1MB4 LINE L1 6132 6162 -18 9170 190 45 54 chr2 89209427 89209765 -161478089 + L1MB5 LINE L1 2679 3018 -3156 1788 176 7 3 chr2 89209765 89210071 -161477783 + AluJb SINE Alu 1 307 -5 9170 190 45 54 chr2 89210071 89211823 -161476031 + L1MB5 LINE L1 3018 4784 -1390 2489 62 10 7 chr2 89211823 89212129 -161475725 + AluSg SINE Alu 4 310 0 9170 190 45 54 chr2 89212129 89212372 -161475482 + L1MB5 LINE L1 4784 5028 -1146 960 63 0 8 chr2 89212372 89212498 -161475356 + L1MA2 LINE L1 6180 6304 0 9170 190 45 54 chr2 89212498 89212511 -161475343 + L1MB5 LINE L1 5028 5040 -1134 1881 136 49 0 chr2 89212511 89212797 -161475057 + AluJb SINE Alu 1 300 -12 9170 190 45 54 chr2 89212797 89213925 -161473929 + L1MB5 LINE L1 5040 6176 2 2250 113 0 25 chr2 89213925 89214244 -161473610 + AluSq SINE Alu 1 311 -2 9170 190 45 54 chr2 89214244 89214530 -161473324 + L1MB5 LINE L1 6176 6463 289 2180 129 0 0 chr2 89214530 89214824 -161473030 + AluSx SINE Alu 3 296 -16 2238 94 13 3 chr2 89214828 89215136 -161472718 + AluY SINE Alu 1 311 0 9170 190 45 54 chr2 89215136 89215234 -161472620 + L1MB5 LINE L1 6077 6174 0 1152 199 0 10 chr2 89215240 89215446 -161472408 + AluJo SINE Alu 1 204 -108 1604 87 0 14 chr2 89215674 89215881 -161471973 + AluSg/x SINE Alu 71 274 -38 919 186 0 0 chr2 89215882 89216038 -161471816 + AluJb SINE Alu 147 302 -10 654 199 81 5 chr2 89216039 89216225 -161471629 + L1M4 LINE L1 5284 5483 -701 1694 261 49 38 chr2 89216225 89216369 -161471485 - HERV16 LTR ERVL -2833 2163 2022 1719 185 3 16 chr2 89216369 89216683 -161471171 - AluJo SINE Alu -2 310 1 1694 261 49 38 chr2 89216683 89217066 -161470788 - HERV16 LTR ERVL -2974 2022 1630 354 259 7 79 chr2 89217235 89217374 -161470480 - MIR SINE MIR -119 143 15 506 295 96 62 chr2 89219150 89219648 -161468206 - REP3 LTR ERV -47 515 1 213 196 0 0 chr2 89219650 89219696 -161468158 + MIR SINE MIR 121 166 -96 3331 156 29 16 chr2 89219717 89220332 -161467522 - L1MB7 LINE L1 -16 6168 5546 888 275 187 6 chr2 89220390 89220502 -161467352 - L2 LINE L2 0 3313 3223 270 95 0 0 chr2 89220502 89220544 -161467310 + (TG)n Simple_repeat Simple_repeat 1 42 0 888 275 187 6 chr2 89220544 89220607 -161467247 - L2 LINE L2 -90 3223 3173 1683 118 4 0 chr2 89220607 89220836 -161467018 + AluSq SINE Alu 3 232 -81 888 275 187 6 chr2 89220836 89221418 -161466436 - L2 LINE L2 -140 3173 2398 352 255 32 0 chr2 89221414 89221508 -161466346 + L2 LINE L2 3216 3312 -1 * 1893 150 19 3 chr2 89221783 89222090 -161465764 - AluSx SINE Alu 0 312 1 340 219 26 70 chr2 89222203 89222317 -161465537 - MIR SINE MIR -105 157 49 2200 120 0 3 chr2 89223293 89223592 -161464262 + AluJb SINE Alu 1 298 -14 2211 100 3 3 chr2 89223728 89224028 -161463826 + AluSx SINE Alu 1 300 -12 405 0 0 0 chr2 89224427 89224472 -161463382 + (CA)n Simple_repeat Simple_repeat 2 46 0 1018 94 14 150 chr2 89224546 89224759 -161463095 + AluSx SINE Alu 1 184 -128 377 266 181 8 chr2 89224921 89225169 -161462685 + L1MC4 LINE L1 7752 8042 0 240 214 100 14 chr2 89227167 89227237 -161460617 + MIR SINE MIR 35 110 -152 308 348 92 0 chr2 89228523 89228664 -161459190 + MIR SINE MIR 66 219 -43 281 109 174 0 chr2 89229507 89229553 -161458301 + AluJb SINE Alu 85 138 -164 1706 91 0 0 chr2 89229553 89229762 -161458092 + AluSg1 SINE Alu 1 209 -100 1213 194 5 0 chr2 89229766 89229977 -161457877 + AluJb SINE Alu 85 296 -16 621 196 139 12 chr2 89230199 89230372 -161457482 + L1MD3 LINE L1 7791 7985 -10 * 714 211 75 75 chr2 89230364 89230549 -161457305 + L1ME1 LINE L1 5934 6121 -45 2430 78 0 7 chr2 89230549 89230855 -161456999 - AluSx SINE Alu -8 304 1 714 211 75 75 chr2 89230855 89230897 -161456957 + L1ME1 LINE L1 6120 6161 -5 2251 62 35 7 chr2 89230927 89231215 -161456639 + AluY SINE Alu 1 296 -15 2151 102 0 0 chr2 89231619 89231934 -161455920 - AluSx SINE Alu 0 315 1 779 153 163 10 chr2 89232015 89232217 -161455637 + Charlie1 DNA MER1_type 2378 2610 -151 216 0 0 0 chr2 89232224 89232248 -161455606 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1000 115 14 0 chr2 89232252 89232391 -161455463 - AluSg/x SINE Alu -37 272 132 422 200 35 83 chr2 89232497 89232573 -161455281 + Charlie1 DNA MER1_type 2620 2687 -74 1854 115 34 41 chr2 89232573 89232868 -161454986 + AluSg SINE Alu 1 293 -17 422 200 35 83 chr2 89232868 89232936 -161454918 + Charlie1 DNA MER1_type 2687 2757 -4 456 238 24 16 chr2 89233051 89233177 -161454677 - MIR SINE MIR -103 159 33 1697 166 10 39 chr2 89233514 89233822 -161454032 - AluJo SINE Alu -13 299 1 2310 107 0 0 chr2 89233853 89234152 -161453702 - AluSx SINE Alu -13 299 1 262 379 26 0 chr2 89235046 89235199 -161452655 + L2 LINE L2 2456 2612 -702 249 333 36 10 chr2 89235701 89235893 -161451961 + L1ME LINE L1 5541 5737 -384 1793 162 0 26 chr2 89236035 89236338 -161451516 - AluJb SINE Alu -17 295 1 840 182 7 0 chr2 89236440 89236583 -161451271 - L1PA16 LINE L1 -45 6121 5978 200 311 14 27 chr2 89236603 89236677 -161451177 - L2 LINE L2 -52 3261 3189 2169 100 43 3 chr2 89236845 89237145 -161450709 + AluSx SINE Alu 1 312 0 977 104 8 15 chr2 89237431 89237565 -161450289 + AluSg SINE Alu 1 133 -177 2182 87 7 27 chr2 89237565 89237863 -161449991 + AluSg SINE Alu 1 292 -18 1073 143 18 30 chr2 89238044 89238212 -161449642 + AluJb SINE Alu 137 302 -10 260 327 0 19 chr2 89238353 89238457 -161449397 + MER5A DNA MER1_type 86 187 -2 2171 95 20 13 chr2 89239109 89239414 -161448440 + AluSq SINE Alu 1 307 -6 279 290 32 81 chr2 89239570 89239694 -161448160 - L2 LINE L2 -1 3271 3154 541 149 149 52 chr2 89240394 89240548 -161447306 - MER69A DNA AcHobo -8 169 1 2270 63 16 51 chr2 89240694 89241009 -161446845 + AluY SINE Alu 1 304 -7 2004 123 3 23 chr2 89241065 89241365 -161446489 + AluJb SINE Alu 1 294 -18 426 85 0 0 chr2 89241444 89241503 -161446351 + (TGAG)n Simple_repeat Simple_repeat 1 59 0 570 231 184 1 chr2 89241564 89241784 -161446070 + MIR SINE MIR 1 261 -1 880 160 73 78 chr2 89241801 89241903 -161445951 + MER58A DNA MER1_type 3 104 -2316 2052 115 14 14 chr2 89241903 89242061 -161445793 - AluSx SINE Alu -17 295 135 2448 102 0 0 chr2 89242061 89242374 -161445480 - AluSq SINE Alu 0 313 1 2052 115 14 14 chr2 89242374 89242510 -161445344 - AluSx SINE Alu -176 136 1 880 160 73 78 chr2 89242510 89242626 -161445228 + MER58A DNA MER1_type 104 220 -4 2180 126 0 3 chr2 89242808 89243117 -161444737 - AluSx SINE Alu -4 308 1 1819 177 0 34 chr2 89243175 89243357 -161444497 - AluJo SINE Alu -1 311 143 2284 112 0 0 chr2 89243357 89243653 -161444201 - AluSg SINE Alu -14 296 1 1819 177 0 34 chr2 89243653 89243792 -161444062 - AluJo SINE Alu -169 143 1 182 231 0 0 chr2 89244691 89244730 -161443124 + MIR SINE MIR 199 237 -25 1198 96 57 0 chr2 89244864 89245021 -161442833 - AluSp SINE Alu -15 298 133 22 0 0 0 chr2 89245031 89245053 -161442801 + AT_rich Low_complexity Low_complexity 1 22 0 1829 158 7 10 chr2 89245053 89245344 -161442510 - AluJo SINE Alu -22 290 1 4232 141 54 43 chr2 89245356 89245616 -161442238 - L1MB7 LINE L1 -16 6168 5912 2390 86 0 13 chr2 89245616 89245920 -161441934 - AluSx SINE Alu -12 300 1 4232 141 54 43 chr2 89245920 89246419 -161441435 - L1MB7 LINE L1 -272 5912 5397 2208 122 3 6 chr2 89246419 89246730 -161441124 - AluSx SINE Alu 0 312 3 4232 141 54 43 chr2 89246730 89246790 -161441064 - L1MB7 LINE L1 -787 5397 5339 477 257 33 26 chr2 89247091 89247243 -161440611 + AluJb SINE Alu 139 291 -21 384 215 91 8 chr2 89247420 89247541 -161440313 - AluSq/x SINE Alu -170 132 2 2195 83 0 0 chr2 89247617 89247883 -161439971 + AluSq SINE Alu 3 268 -45 216 0 0 0 chr2 89247898 89247922 -161439932 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 2271 79 10 0 chr2 89248100 89248390 -161439464 - AluY SINE Alu -18 293 1 413 177 133 9 chr2 89248567 89248680 -161439174 - L2 LINE L2 -8 3305 3179 1026 161 23 0 chr2 89248684 89248858 -161438996 + AluJo SINE Alu 121 298 -14 1681 180 10 20 chr2 89249000 89249306 -161438548 + AluJb SINE Alu 1 303 -9 249 242 10 0 chr2 89249893 89249994 -161437860 - L1MCa LINE L1 -1339 6983 2006 779 62 0 3 chr2 89250695 89250936 -161436918 + AluSx SINE Alu 1 306 -3 2310 93 7 0 chr2 89251162 89251464 -161436390 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr2 89251867 89251890 -161435964 + AT_rich Low_complexity Low_complexity 1 23 0 2893 13 0 6 chr2 89252406 89252722 -161435132 + AluYb8 SINE Alu 1 314 -4 1863 127 98 0 chr2 89252766 89253042 -161434812 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr2 89253766 89253787 -161434067 + AT_rich Low_complexity Low_complexity 1 21 0 205 184 20 0 chr2 89254407 89254456 -161433398 + L2 LINE L2 3263 3312 -1 882 56 0 0 chr2 89254555 89254662 -161433192 - AluSg/x SINE Alu -7 303 197 682 122 0 10 chr2 89254890 89254988 -161432866 + FLAM_C SINE Alu 33 129 -14 264 122 0 0 chr2 89254988 89255029 -161432825 + (CACG)n Simple_repeat Simple_repeat 1 41 0 310 247 0 12 chr2 89255249 89255334 -161432520 - MIR SINE MIR -122 140 57 2313 98 0 0 chr2 89255919 89256214 -161431640 - AluSg SINE Alu -15 295 1 221 267 78 0 chr2 89257056 89257146 -161430708 - L2 LINE L2 -934 2380 2284 314 193 171 71 chr2 89257690 89257743 -161430111 + LTR50 LTR ERVL 4 50 -745 797 217 94 20 chr2 89257743 89257946 -161429908 + MER20 DNA MER1_type 2 219 0 314 193 171 71 chr2 89257946 89258032 -161429822 + LTR50 LTR ERVL 50 157 -638 260 160 140 0 chr2 89258224 89258274 -161429580 + MER3 DNA MER1_type 20 76 -133 1348 200 48 64 chr2 89258283 89258591 -161429263 + L1MC4 LINE L1 6710 7011 -1031 2239 112 3 0 chr2 89258591 89258885 -161428969 + AluSc SINE Alu 1 295 -14 1348 200 48 64 chr2 89258885 89258996 -161428858 + L1MC4 LINE L1 7011 7122 -920 818 154 105 0 chr2 89259045 89259188 -161428666 - MER3 DNA MER1_type -1 208 51 1780 149 17 7 chr2 89259254 89259542 -161428312 - AluSx SINE Alu -21 291 1 776 286 128 28 chr2 89259562 89260031 -161427823 + HAL1 LINE L1 36 551 -1956 1841 146 170 16 chr2 89260307 89260678 -161427176 - MSTA LTR MaLR 0 428 1 1282 184 135 4 chr2 89260702 89260968 -161426886 + AluJo SINE Alu 1 301 -1 1192 191 16 51 chr2 89260975 89261232 -161426622 - MER82 DNA MER2_type -76 577 330 460 12 77 60 chr2 89261283 89261451 -161426403 + (TA)n Simple_repeat Simple_repeat 1 171 0 786 223 16 16 chr2 89261451 89261644 -161426210 - MER82 DNA MER2_type -437 216 24 2116 102 38 7 chr2 89261646 89261939 -161425915 + AluSx SINE Alu 1 302 -10 2153 94 33 3 chr2 89262582 89262881 -161424973 - AluSp SINE Alu -5 308 1 2570 65 3 0 chr2 89263110 89263418 -161424436 + AluY SINE Alu 1 309 -2 1036 123 0 0 chr2 89263741 89263895 -161423959 + L1MA5 LINE L1 6097 6250 -50 1357 161 55 79 chr2 89263899 89264051 -161423803 + AluSq SINE Alu 1 155 -158 350 148 0 0 chr2 89264051 89264112 -161423742 + L1MA5 LINE L1 6240 6300 0 2384 96 0 6 chr2 89264119 89264431 -161423423 + AluY SINE Alu 1 310 -1 310 92 15 77 chr2 89264432 89264497 -161423357 + L1MA5 LINE L1 6240 6300 0 1741 116 0 0 chr2 89264502 89264735 -161423119 + AluSq SINE Alu 1 233 -80 1357 161 55 79 chr2 89264735 89264858 -161422996 + AluSq SINE Alu 165 285 -28 225 0 0 0 chr2 89264858 89264883 -161422971 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2415 90 0 3 chr2 89265167 89265479 -161422375 - AluY SINE Alu 0 311 1 1286 172 95 0 chr2 89265484 89265705 -161422149 + Tigger7 DNA MER2_type 23 264 -2223 514 138 11 43 chr2 89265710 89265804 -161422050 + Tigger7 DNA MER2_type 2497 2587 0 185 322 17 0 chr2 89265910 89265969 -161421885 + L3 LINE CR1 613 672 -905 557 163 132 39 chr2 89265973 89266102 -161421752 + FLAM_C SINE Alu 2 142 -1 352 304 127 80 chr2 89266152 89266220 -161421634 + L3 LINE CR1 720 783 -794 2381 67 0 17 chr2 89266220 89266517 -161421337 - AluY SINE Alu -19 292 1 352 304 127 80 chr2 89266517 89267023 -161420831 + L3 LINE CR1 783 1321 -256 1200 184 47 36 chr2 89267024 89267301 -161420553 + L1MD3 LINE L1 7716 7995 0 1422 183 103 10 chr2 89267642 89267942 -161419912 + MER7A DNA MER2_type 18 343 -3 231 133 222 0 chr2 89267946 89267991 -161419863 - MER112 DNA MER1_type -8 252 198 1037 245 77 79 chr2 89268000 89268250 -161419604 + MER20B DNA MER1_type 8 257 -526 2112 138 0 3 chr2 89268250 89268546 -161419308 + AluSx SINE Alu 1 297 -15 198 0 0 0 chr2 89268546 89268568 -161419286 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1748 136 9 97 chr2 89268583 89268734 -161419120 + AluJo SINE Alu 1 107 -205 180 0 0 0 chr2 89268734 89268754 -161419100 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 1748 136 9 97 chr2 89268754 89268941 -161418913 + AluJo SINE Alu 107 309 -3 1037 245 77 79 chr2 89268941 89269174 -161418680 + MER20B DNA MER1_type 264 499 -284 2211 76 43 0 chr2 89269286 89269563 -161418291 + AluY SINE Alu 1 289 -22 21 36 0 0 chr2 89270228 89270256 -161417598 + AT_rich Low_complexity Low_complexity 1 28 0 2215 88 0 7 chr2 89270258 89270541 -161417313 + AluSg SINE Alu 1 281 -29 360 105 0 14 chr2 89270545 89270608 -161417246 + Alu SINE Alu 1 44 -259 264 88 0 0 chr2 89270610 89270644 -161417210 + Alu SINE Alu 248 281 -21 702 203 0 0 chr2 89270646 89270794 -161417060 + (TAGA)n Simple_repeat Simple_repeat 3 150 0 1964 126 0 38 chr2 89270797 89271140 -161416714 + AluSx SINE Alu 1 332 0 349 200 168 26 chr2 89271156 89271311 -161416543 - MER112 DNA MER1_type -42 218 42 2236 97 0 10 chr2 89271314 89271625 -161416229 + AluSq SINE Alu 1 308 0 2200 121 3 10 chr2 89271636 89271949 -161415905 + AluSx SINE Alu 1 311 -1 1679 148 96 28 chr2 89272579 89272903 -161414951 + MER7A DNA MER2_type 2 345 -1 2345 98 0 10 chr2 89272971 89273278 -161414576 + AluSx SINE Alu 1 304 -8 1017 236 241 12 chr2 89273446 89273866 -161413988 + MER20B DNA MER1_type 119 634 -149 696 198 16 0 chr2 89273911 89274037 -161413817 - AluJb SINE Alu -183 129 2 2281 96 0 3 chr2 89274388 89274681 -161413173 + AluSg SINE Alu 1 292 -18 614 236 80 87 chr2 89274683 89275006 -161412848 + L1MC5 LINE L1 7306 7627 -334 2355 92 3 0 chr2 89275006 89275301 -161412553 + AluSp SINE Alu 1 296 -17 614 236 80 87 chr2 89275301 89275451 -161412403 + L1MC5 LINE L1 7627 7776 -185 2290 78 0 3 chr2 89275461 89275806 -161412048 + AluY SINE Alu 1 344 0 2122 123 0 0 chr2 89275833 89276160 -161411694 + AluSq SINE Alu 1 327 0 1701 163 27 14 chr2 89276488 89276783 -161411071 - AluJb SINE Alu 0 312 14 2203 58 44 0 chr2 89276811 89277085 -161410769 + AluY SINE Alu 23 308 -3 2003 80 4 4 chr2 89277197 89277448 -161410406 + AluSx SINE Alu 45 295 -17 276 268 12 24 chr2 89277700 89277782 -161410072 + MLT1E LTR MaLR 1 81 -512 2142 93 3 90 chr2 89278281 89278615 -161409239 + AluSq SINE Alu 1 305 -8 2324 87 13 0 chr2 89279809 89280108 -161407746 - AluSg1 SINE Alu -6 303 1 2206 91 7 17 chr2 89281020 89281317 -161406537 - AluSg SINE Alu -16 294 1 2294 100 0 3 chr2 89285843 89286134 -161401720 + AluSq SINE Alu 1 290 -23 307 237 10 38 chr2 89286350 89286460 -161401394 - MER103 DNA DNA -43 123 14 404 295 71 48 chr2 89287116 89287326 -161400528 - MIR SINE MIR -1 261 47 305 232 0 0 chr2 89287407 89287476 -161400378 - Charlie7 DNA MER1_type -2507 105 37 1616 154 41 4 chr2 89288055 89288322 -161399532 - AluJb SINE Alu -20 292 16 244 135 0 0 chr2 89288322 89288359 -161399495 - AluJb SINE Alu -263 37 1 309 284 92 0 chr2 89289196 89289305 -161398549 + L2 LINE L2 3195 3313 0 1268 111 83 18 chr2 89290091 89290308 -161397546 - L1PA14 LINE L1 0 6161 5931 1657 161 29 38 chr2 89291074 89291416 -161396438 - MER44D DNA MER2_type 0 609 1 2053 148 0 0 chr2 89291567 89291865 -161395989 - AluSx SINE Alu -13 299 2 202 179 18 18 chr2 89292916 89292972 -161394882 + (TA)n Simple_repeat Simple_repeat 2 57 0 1775 159 29 0 chr2 89292973 89293249 -161394605 - AluJo SINE Alu -28 284 1 1130 52 7 15 chr2 89293396 89293532 -161394322 + AluSq/x SINE Alu 1 135 -178 1863 126 3 35 chr2 89293532 89293817 -161394037 + AluSg SINE Alu 1 276 -34 204 40 0 0 chr2 89293824 89293849 -161394005 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 763 183 0 29 chr2 89294361 89294498 -161393356 + FLAM_A SINE Alu 1 133 0 198 0 0 0 chr2 89296430 89296452 -161391402 + (A)n Simple_repeat Simple_repeat 1 22 0 2406 85 13 3 chr2 89297154 89297461 -161390393 + AluSg SINE Alu 1 310 0 2235 112 0 13 chr2 89298098 89298403 -161389451 + AluSq SINE Alu 1 301 -12 653 203 0 0 chr2 89299196 89299319 -161388535 + AluJb SINE Alu 2 124 -188 225 94 0 0 chr2 89299585 89299617 -161388237 + (GAA)n Simple_repeat Simple_repeat 2 33 0 1027 160 0 53 chr2 89300263 89300450 -161387404 - MER1B DNA MER1_type -120 177 1 63 36 0 0 chr2 89301319 89301403 -161386451 + AT_rich Low_complexity Low_complexity 1 84 0 1660 191 14 17 chr2 89301408 89301701 -161386153 - AluJo SINE Alu -20 292 1 304 214 38 114 chr2 89302126 89302257 -161385597 + MIR SINE MIR 5 125 -137 1856 130 0 0 chr2 89303293 89303546 -161384308 + AluSq SINE Alu 1 253 -60 1629 152 45 45 chr2 89304024 89304314 -161383540 - AluJb SINE Alu -22 290 1 1223 202 138 50 chr2 89304434 89304854 -161383000 + MSTB2 LTR MaLR 1 457 0 1312 195 63 95 chr2 89305119 89305400 -161382454 + L1M4 LINE L1 3961 4225 -1921 1985 117 3 40 chr2 89305400 89305538 -161382316 + AluSx SINE Alu 2 144 -168 2280 99 0 0 chr2 89305538 89305873 -161381981 + AluSq SINE Alu 1 335 0 1985 117 3 40 chr2 89305873 89306033 -161381821 + AluSx SINE Alu 144 290 -22 1312 195 63 95 chr2 89306033 89306182 -161381672 + L1M4 LINE L1 4225 4377 -1769 1312 210 33 4 chr2 89306184 89306455 -161381399 + AluJo SINE Alu 8 286 -26 4385 190 45 14 chr2 89306464 89306508 -161381346 + L1M4 LINE L1 4359 4400 -1778 1854 150 102 9 chr2 89306508 89306842 -161381012 - MER47A DNA MER2_type 0 366 2 4385 190 45 14 chr2 89306842 89307217 -161380637 + L1M4 LINE L1 4400 4762 -1416 1781 179 7 3 chr2 89307217 89307514 -161380340 + AluJb SINE Alu 1 298 -14 4385 190 45 14 chr2 89307514 89308228 -161379626 + L1M4 LINE L1 4762 5525 -653 2252 105 7 13 chr2 89308232 89308537 -161379317 + AluSq SINE Alu 1 303 -10 1580 164 7 55 chr2 89308603 89308913 -161378941 - AluJb SINE Alu -17 295 1 1984 139 26 7 chr2 89308950 89309253 -161378601 + AluSx SINE Alu 2 310 -2 2275 102 13 3 chr2 89309425 89309729 -161378125 + AluSg SINE Alu 1 307 -3 2318 85 0 7 chr2 89309729 89310021 -161377833 + AluSq SINE Alu 1 291 -22 2251 113 7 3 chr2 89310537 89310846 -161377008 + AluSx SINE Alu 1 310 -2 316 302 153 35 chr2 89310989 89311277 -161376577 + L1MEd LINE L1 290 611 -5508 1630 185 10 3 chr2 89311427 89311767 -161376087 + AluJo SINE Alu 3 312 0 700 190 0 51 chr2 89311777 89311914 -161375940 + FLAM_C SINE Alu 1 130 -3 2288 101 0 0 chr2 89311924 89312212 -161375642 + AluSx SINE Alu 2 289 -23 22 35 0 0 chr2 89312212 89312241 -161375613 + AT_rich Low_complexity Low_complexity 1 29 0 1169 135 0 6 chr2 89312433 89312603 -161375251 + AluSg/x SINE Alu 127 295 -15 1300 151 21 8 chr2 89312629 89312867 -161374987 + L1MB3 LINE L1 5942 6182 -1 1123 284 76 66 chr2 89312871 89313593 -161374261 + L1ME LINE L1 4381 5094 -1068 291 54 0 0 chr2 89313593 89313630 -161374224 + (CA)n Simple_repeat Simple_repeat 1 37 0 * 300 27 0 0 chr2 89313629 89313666 -161374188 + (TC)n Simple_repeat Simple_repeat 1 37 0 1123 284 76 66 chr2 89313630 89313718 -161374136 + L1ME LINE L1 5094 5180 -982 2144 106 17 10 chr2 89313718 89314019 -161373835 - AluSg SINE Alu -7 303 1 1123 284 76 66 chr2 89314019 89314563 -161373291 + L1ME LINE L1 5180 5711 -451 2563 40 0 16 chr2 89314593 89314896 -161372958 + AluY SINE Alu 1 298 -13 2556 56 3 0 chr2 89315027 89315330 -161372524 + AluY SINE Alu 1 304 -7 1825 160 7 7 chr2 89315737 89316024 -161371830 - AluJb SINE Alu -25 287 1 2466 76 3 0 chr2 89316097 89316399 -161371455 + AluSq SINE Alu 1 303 -10 301 239 13 116 chr2 89316417 89316480 -161371374 - L1MC/D LINE L1 -1963 5845 5777 808 266 48 0 chr2 89316480 89316687 -161371167 + MER58A DNA MER1_type 4 220 -4 301 239 13 116 chr2 89316687 89316778 -161371076 - L1MC/D LINE L1 -2031 5777 5707 2467 72 0 7 chr2 89316818 89317124 -161370730 + AluSc SINE Alu 1 304 -5 1025 173 0 23 chr2 89317502 89317675 -161370179 + FRAM SINE Alu 1 161 -15 2226 83 22 4 chr2 89317681 89317982 -161369872 + AluSq SINE Alu 1 306 0 478 174 0 33 chr2 89317987 89318108 -161369746 + GA-rich Low_complexity Low_complexity 4 120 0 1141 186 34 37 chr2 89318350 89318423 -161369431 - L1MB4 LINE L1 -40 6140 6068 2186 82 3 3 chr2 89318423 89318729 -161369125 + AluSg SINE Alu 1 306 0 1141 186 34 37 chr2 89318729 89318923 -161368931 - L1MB4 LINE L1 -112 6068 5873 665 167 249 47 chr2 89318916 89319149 -161368705 - L1MCa LINE L1 -4247 2179 1900 * 1990 117 48 0 chr2 89319838 89320128 -161367726 + AluSq SINE Alu 1 304 -9 4024 101 78 8 chr2 89321241 89321834 -161366020 - MER51A LTR ERV1 0 634 1 1077 161 0 6 chr2 89322376 89322544 -161365310 - AluSg/x SINE Alu -10 302 136 2325 89 14 0 chr2 89322546 89322839 -161365015 - AluSc SINE Alu -12 297 1 1482 152 17 51 chr2 89322919 89323366 -161364488 - MER4B-int LTR ERV1 -4466 2292 1678 235 0 0 54 chr2 89323369 89323406 -161364448 + (TCCC)n Simple_repeat Simple_repeat 2 36 0 1841 169 0 19 chr2 89323406 89323719 -161364135 - AluSg SINE Alu -3 307 1 831 206 174 5 chr2 89323719 89324064 -161363790 - MLT2B1 LTR ERVL -55 465 1 2163 112 16 0 chr2 89324090 89324394 -161363460 + AluSp SINE Alu 1 309 -4 288 309 63 6 chr2 89324394 89324569 -161363285 - L1M4 LINE L1 -2246 3900 3716 260 188 0 0 chr2 89324623 89324669 -161363185 - MLT2B3 LTR ERVL -7 513 468 1644 161 58 7 chr2 89324669 89324960 -161362894 - MER2 DNA MER2_type 0 345 40 433 194 97 0 chr2 89324964 89325057 -161362797 + MLT1H1 LTR MaLR 454 555 0 2315 107 0 3 chr2 89325080 89325388 -161362466 + AluSx SINE Alu 1 307 -5 2571 51 0 26 chr2 89325392 89325703 -161362151 + AluY SINE Alu 1 303 -8 581 152 0 11 chr2 89325708 89325800 -161362054 + FLAM_A SINE Alu 25 115 -27 2849 153 15 11 chr2 89325828 89326297 -161361557 - MLT2B3 LTR ERVL -39 515 45 1652 181 14 17 chr2 89326304 89326596 -161361258 + Tigger7 DNA MER2_type 7 297 -436 977 98 201 0 chr2 89326595 89326759 -161361095 + Tigger7 DNA MER2_type 2295 2491 0 * 321 87 0 0 chr2 89326759 89326804 -161361050 - MLT2B3 LTR ERVL -509 45 1 183 222 0 0 chr2 89326931 89326976 -161360878 + (TG)n Simple_repeat Simple_repeat 2 46 0 2265 105 0 3 chr2 89327044 89327339 -161360515 + AluSx SINE Alu 1 294 -18 2178 124 10 0 chr2 89327342 89327649 -161360205 + AluSx SINE Alu 1 310 -2 242 211 118 99 chr2 89327672 89327824 -161360030 - MLT1J LTR MaLR -51 460 306 1589 203 41 3 chr2 89328003 89328317 -161359537 + MLT2C1 LTR ERVL 1 326 -71 3094 133 48 64 chr2 89328317 89328926 -161358928 + LTR9 LTR ERV1 1 599 -13 325 94 78 31 chr2 89328945 89328972 -161358882 + MLT2C1 LTR ERVL 390 414 -50 324 0 0 0 chr2 89328972 89329008 -161358846 + (TG)n Simple_repeat Simple_repeat 2 37 0 325 94 78 31 chr2 89329008 89329044 -161358810 + MLT2C1 LTR ERVL 414 456 -8 1538 179 3 53 chr2 89329446 89329747 -161358107 - AluJb SINE Alu -26 286 1 21 0 0 0 chr2 89329801 89329822 -161358032 + AT_rich Low_complexity Low_complexity 1 21 0 1256 194 147 4 chr2 89330777 89331035 -161356819 - AluJb SINE Alu -6 296 2 2210 113 3 0 chr2 89331041 89331334 -161356520 - AluSq SINE Alu -19 294 1 824 134 0 22 chr2 89331337 89331471 -161356383 - AluJo/FLAM SINE Alu -169 133 3 1123 213 0 5 chr2 89331473 89331689 -161356165 - L1MC4 LINE L1 -458 7584 7370 1135 262 69 36 chr2 89331709 89332102 -161355752 + MLT1K LTR MaLR 150 555 -33 2154 92 46 0 chr2 89332768 89333052 -161354802 + AluSx SINE Alu 1 297 -15 261 286 48 0 chr2 89333052 89333136 -161354718 + L2 LINE L2 3184 3271 -1 467 256 79 59 chr2 89333692 89333895 -161353959 - MER63A DNA MER1_type 0 210 4 2578 48 3 0 chr2 89333971 89334266 -161353588 - AluY SINE Alu -12 299 4 646 294 41 0 chr2 89334313 89334510 -161353344 - MLT1L LTR MaLR -7 608 404 771 143 79 39 chr2 89334693 89334896 -161352958 - MER20B DNA MER1_type 0 783 573 747 275 35 10 chr2 89335039 89335239 -161352615 + MLT1I LTR MaLR 205 409 0 606 281 21 46 chr2 89335243 89335524 -161352330 - MER20B DNA MER1_type -219 564 291 326 195 85 0 chr2 89335583 89335731 -161352123 + L1ME3A LINE L1 5916 6145 -25 2219 105 7 0 chr2 89335740 89336036 -161351818 - AluSx SINE Alu -14 298 1 585 241 44 57 chr2 89336073 89336231 -161351623 - MER20B DNA MER1_type -589 194 39 689 199 6 0 chr2 89336403 89336564 -161351290 + (TGG)n Simple_repeat Simple_repeat 1 162 0 294 163 20 59 chr2 89336620 89336773 -161351081 + (ATGGTG)n Simple_repeat Simple_repeat 3 149 0 249 98 0 0 chr2 89336922 89336963 -161350891 + (T)n Simple_repeat Simple_repeat 1 41 0 2140 83 0 14 chr2 89336976 89337296 -161350558 + AluSx SINE Alu 1 284 -28 2211 102 3 13 chr2 89337307 89337622 -161350232 + AluSx SINE Alu 1 312 0 812 146 0 53 chr2 89337637 89337788 -161350066 + FLAM_C SINE Alu 1 143 0 1706 139 6 50 chr2 89338005 89338322 -161349532 - AluJo SINE Alu -9 303 1 306 350 22 15 chr2 89338880 89339017 -161348837 - L2 LINE L2 -216 3056 2919 537 80 40 20 chr2 89339304 89339404 -161348450 + C-rich Low_complexity Low_complexity 4 105 0 1123 133 0 22 chr2 89339479 89339659 -161348195 + FRAM SINE Alu 1 172 -4 2248 110 3 0 chr2 89339752 89340060 -161347794 - AluSg SINE Alu 0 310 2 287 296 11 34 chr2 89340149 89340237 -161347617 + L2 LINE L2 3187 3272 0 3291 226 53 12 chr2 89340409 89341178 -161346676 - MER21B LTR ERV1 -54 809 9 1858 114 54 0 chr2 89341230 89341510 -161346344 + AluSp SINE Alu 2 296 -17 1952 99 7 11 chr2 89341615 89341899 -161345955 - AluSx SINE Alu -29 283 1 377 316 73 61 chr2 89342252 89342410 -161345444 - MLT1K LTR MaLR -82 506 352 2072 100 7 3 chr2 89342410 89342700 -161345154 + AluSx SINE Alu 1 291 -21 377 316 73 61 chr2 89342700 89342854 -161345000 - MLT1K LTR MaLR -236 352 190 210 167 24 0 chr2 89342968 89343010 -161344844 + L2 LINE L2 3256 3298 -15 1943 130 0 3 chr2 89343340 89343633 -161344221 - AluSx SINE Alu -16 296 5 202 310 49 84 chr2 89343648 89343733 -161344121 - L2 LINE L2 -1 3312 3226 1940 140 3 0 chr2 89343733 89344033 -161343821 - AluJb SINE Alu -5 307 7 202 310 49 84 chr2 89344033 89344150 -161343704 - L2 LINE L2 -87 3226 3117 921 241 136 28 chr2 89344273 89344671 -161343183 + L1MC4a LINE L1 5519 5959 -1849 1345 88 62 0 chr2 89344821 89345041 -161342813 - AluSg/x SINE Alu 0 316 85 773 196 0 0 chr2 89345073 89345206 -161342648 - FLAM_C SINE Alu 0 133 1 2210 80 33 3 chr2 89346332 89346633 -161341221 + AluSq SINE Alu 1 310 -3 1417 140 136 4 chr2 89346925 89347189 -161340665 - AluJo SINE Alu -13 299 1 2254 102 0 3 chr2 89347326 89347640 -161340214 - AluSq SINE Alu 0 313 1 2179 84 20 7 chr2 89347650 89347946 -161339908 - AluSg SINE Alu -10 300 1 1880 138 14 3 chr2 89348005 89348302 -161339552 - AluSx SINE Alu -8 304 5 2075 94 31 0 chr2 89348498 89348785 -161339069 - AluSq SINE Alu -17 296 1 1808 176 0 0 chr2 89348897 89349192 -161338662 - AluJo SINE Alu -15 297 3 1938 148 0 3 chr2 89349194 89349492 -161338362 - AluSx SINE Alu -15 297 1 752 136 0 8 chr2 89349494 89349612 -161338242 - FLAM_A SINE Alu -16 126 10 2146 107 3 0 chr2 89349795 89350093 -161337761 - AluSp SINE Alu -14 299 1 2201 111 0 0 chr2 89350143 89350449 -161337405 - AluSx SINE Alu -6 306 1 839 180 78 0 chr2 89350477 89350644 -161337210 - L1MC2 LINE L1 -41 6303 6124 1702 168 28 0 chr2 89350644 89350935 -161336919 - AluJb SINE Alu -13 299 1 2328 208 88 83 chr2 89350935 89351037 -161336817 - L1MEc LINE L1 -1096 5050 4950 2062 119 10 0 chr2 89351037 89351339 -161336515 - AluSp SINE Alu -8 305 1 2328 208 88 83 chr2 89351339 89351908 -161335946 - L1MEc LINE L1 -1196 4950 4370 1989 129 3 3 chr2 89351908 89352217 -161335637 + AluSx SINE Alu 1 309 -3 2328 208 88 83 chr2 89352217 89352439 -161335415 - L1MEc LINE L1 -1776 4370 4151 207 0 0 0 chr2 89352439 89352462 -161335392 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 907 184 0 0 chr2 89352467 89352619 -161335235 - AluJb SINE Alu -32 280 129 1679 169 19 3 chr2 89352621 89352928 -161334926 - AluJb SINE Alu 0 312 1 2518 186 16 26 chr2 89352936 89353483 -161334371 - L1MEc LINE L1 -1984 4162 3621 1599 266 25 5 chr2 89353483 89353889 -161333965 - MER74B LTR ERVL 0 622 209 252 196 39 0 chr2 89353923 89353974 -161333880 - MER74B LTR ERVL -569 53 1 325 286 63 40 chr2 89353981 89354107 -161333747 - L1MEc LINE L1 -2521 3625 3497 2106 108 0 3 chr2 89354116 89354411 -161333443 - AluSg SINE Alu -16 294 1 3090 241 19 28 chr2 89354411 89354517 -161333337 - L1MEc LINE L1 -3087 3059 2954 2048 124 3 0 chr2 89354517 89354815 -161333039 - AluSx SINE Alu -13 299 1 3090 241 19 28 chr2 89354815 89355702 -161332152 - L1MEc LINE L1 -3192 2954 2110 1879 124 0 4 chr2 89355702 89355976 -161331878 - AluSx SINE Alu -39 273 1 2321 80 3 6 chr2 89355984 89356296 -161331558 - AluSp SINE Alu -2 311 1 301 45 0 0 chr2 89356303 89356347 -161331507 - L1MB4 LINE L1 0 6180 6137 1911 125 3 7 chr2 89356360 89356648 -161331206 - AluSx SINE Alu -25 287 1 1568 189 17 0 chr2 89356669 89356965 -161330889 - AluJb SINE Alu -10 302 2 468 0 0 0 chr2 89356967 89357019 -161330835 + (TTTTA)n Simple_repeat Simple_repeat 5 56 0 855 142 0 62 chr2 89357019 89357181 -161330673 - AluSg/x SINE Alu -36 276 125 1638 95 16 20 chr2 89357336 89357588 -161330266 + AluSx SINE Alu 45 295 -17 752 234 124 14 chr2 89357600 89357809 -161330045 - MIR SINE MIR -19 243 12 275 340 0 43 chr2 89357968 89358062 -161329792 + MIR SINE MIR 37 126 -82 1337 264 105 30 chr2 89358484 89359057 -161328797 + L2 LINE L2 2287 2902 -412 361 175 25 0 chr2 89359081 89359161 -161328693 + L2 LINE L2 3011 3092 -221 787 130 0 53 chr2 89359182 89359313 -161328541 - FLAM_C SINE Alu -11 132 9 345 301 128 30 chr2 89359314 89359517 -161328337 + L2 LINE L2 3091 3313 0 183 318 0 0 chr2 89359523 89359567 -161328287 - L2 LINE L2 -27 3286 3243 * 402 261 297 55 chr2 89359566 89360378 -161327476 + L2 LINE L2 1732 2739 -575 218 274 65 0 chr2 89360668 89360730 -161327124 + L2 LINE L2 3244 3309 -4 1321 239 65 7 chr2 89360739 89361049 -161326805 + MER58B DNA MER1_type 1 328 -13 426 282 23 30 chr2 89361076 89361207 -161326647 + MIR SINE MIR 22 151 -111 1038 223 47 0 chr2 89361305 89361516 -161326338 + MIR SINE MIR 35 255 -7 2247 65 3 39 chr2 89361602 89361908 -161325946 - AluSp SINE Alu -17 296 2 243 323 125 26 chr2 89362078 89362381 -161325473 + L2 LINE L2 2149 2481 -833 235 282 113 48 chr2 89362746 89362870 -161324984 - MIR SINE MIR -11 251 120 2171 83 0 20 chr2 89362950 89363252 -161324602 - AluSg SINE Alu -14 296 1 196 301 40 96 chr2 89363299 89363498 -161324356 + L2 LINE L2 2867 3054 -218 545 262 78 10 chr2 89363732 89363938 -161323916 - MER112 DNA MER1_type -2 258 39 2155 99 0 0 chr2 89364007 89364299 -161323555 - AluSg SINE Alu -18 292 1 622 281 114 20 chr2 89364559 89364863 -161322991 + L2 LINE L2 2750 3082 -231 737 182 30 0 chr2 89364864 89364996 -161322858 + AluJo SINE Alu 2 137 -175 1957 98 14 21 chr2 89364999 89365309 -161322545 - AluSp SINE Alu 0 308 1 23 33 0 0 chr2 89365322 89365352 -161322502 + AT_rich Low_complexity Low_complexity 1 30 0 840 163 0 0 chr2 89365447 89365576 -161322278 + FLAM_C SINE Alu 1 129 -14 599 176 130 0 chr2 89365640 89365748 -161322106 - AluJb SINE Alu -189 123 2 218 219 0 0 chr2 89365749 89365790 -161322064 - L2 LINE L2 -231 3082 3042 746 180 118 35 chr2 89365839 89365905 -161321949 + Charlie5 DNA MER1_type 2345 2404 -220 1432 206 10 14 chr2 89365905 89366037 -161321817 + AluJo SINE Alu 1 132 -180 2146 117 0 9 chr2 89366037 89366353 -161321501 + AluSq SINE Alu 1 313 0 1432 206 10 14 chr2 89366353 89366516 -161321338 + AluJo SINE Alu 132 295 -17 746 180 118 35 chr2 89366516 89366704 -161321150 + Charlie5 DNA MER1_type 2404 2620 -4 2229 79 23 0 chr2 89367150 89367455 -161320399 + AluSx SINE Alu 1 312 0 1822 127 0 14 chr2 89367766 89368082 -161319772 + AluSx SINE Alu 2 313 0 2468 54 0 0 chr2 89368359 89368656 -161319198 + AluY SINE Alu 1 297 -14 1689 187 3 0 chr2 89368907 89369206 -161318648 + AluJo SINE Alu 1 300 -12 2173 69 7 36 chr2 89369716 89370021 -161317833 + AluSp SINE Alu 1 296 -17 22 0 0 0 chr2 89370158 89370180 -161317674 + AT_rich Low_complexity Low_complexity 1 22 0 2032 102 24 3 chr2 89370309 89370602 -161317252 - AluSq SINE Alu -14 299 1 1931 120 10 10 chr2 89370703 89370836 -161317018 + AluSx SINE Alu 1 133 -179 2160 93 10 0 chr2 89370836 89371136 -161316718 + AluSp SINE Alu 1 303 -10 1931 120 10 10 chr2 89371136 89371293 -161316561 + AluSx SINE Alu 132 291 -21 310 43 0 0 chr2 89371300 89371347 -161316507 + L1PA2 LINE L1 6106 6152 -3 2034 100 35 0 chr2 89371552 89371842 -161316012 + AluSp SINE Alu 1 300 -13 1277 200 57 11 chr2 89372129 89372409 -161315445 + AluJb SINE Alu 2 294 -8 695 185 7 55 chr2 89372662 89372808 -161315046 + AluSg/x SINE Alu 128 266 -44 23 0 0 0 chr2 89372810 89372833 -161315021 + AT_rich Low_complexity Low_complexity 1 23 0 480 89 51 0 chr2 89372900 89372979 -161314875 + L1MA8 LINE L1 6206 6288 -3 277 196 0 0 chr2 89373235 89373286 -161314568 - AluYb8 SINE Alu -123 185 135 2005 127 3 0 chr2 89373344 89373644 -161314210 + AluSx SINE Alu 2 302 -10 849 89 0 0 chr2 89374596 89374708 -161313146 - AluSg/x SINE Alu -19 290 179 777 169 16 173 chr2 89374722 89374842 -161313012 + MER58 DNA MER1_type 35 96 -2324 2261 80 3 10 chr2 89374842 89375154 -161312700 + AluSg SINE Alu 1 310 0 777 169 16 173 chr2 89375154 89375287 -161312567 + MER58 DNA MER1_type 96 248 -2172 289 254 0 0 chr2 89375282 89375345 -161312509 + MER58 DNA MER1_type 2356 2418 -2 * 2265 100 3 0 chr2 89375718 89376028 -161311826 + AluSx SINE Alu 1 311 -1 317 299 172 0 chr2 89376410 89376614 -161311240 + L3b LINE CR1 1244 1482 -101 579 229 17 0 chr2 89378214 89378389 -161309465 + (TGG)n Simple_repeat Simple_repeat 2 179 0 657 203 17 0 chr2 89378427 89378604 -161309250 + (TGG)n Simple_repeat Simple_repeat 1 180 0 512 222 15 15 chr2 89378619 89378888 -161308966 + (TGG)n Simple_repeat Simple_repeat 1 269 0 2155 81 32 26 chr2 89379814 89380124 -161307730 + AluSp SINE Alu 1 312 -1 1245 81 17 0 chr2 89380127 89380300 -161307554 + AluSp SINE Alu 129 304 -9 234 265 48 60 chr2 89380441 89380524 -161307330 + L2 LINE L2 3138 3219 -53 22 0 0 0 chr2 89382328 89382350 -161305504 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 89382451 89382472 -161305382 + GC_rich Low_complexity Low_complexity 1 21 0 1730 157 3 10 chr2 89383544 89383849 -161304005 - AluJb SINE Alu -9 303 1 248 140 240 0 chr2 89383920 89383970 -161303884 + MIR SINE MIR 82 143 -119 232 141 313 0 chr2 89384020 89384084 -161303770 - AluJ/FRAM SINE Alu 0 302 219 2303 91 3 0 chr2 89384084 89384392 -161303462 - AluSx SINE Alu -3 309 1 284 194 60 127 chr2 89384449 89384583 -161303271 - MLT1H LTR MaLR 0 549 425 1558 223 72 42 chr2 89384838 89384898 -161302956 - MLT1J2 LTR MaLR -7 443 386 2173 101 3 0 chr2 89384898 89385196 -161302658 - AluSx SINE Alu -8 304 6 1558 223 72 42 chr2 89385196 89385565 -161302289 - MLT1J2 LTR MaLR -64 386 1 1213 241 207 14 chr2 89386026 89386476 -161301378 + MLT1G1 LTR MaLR 5 595 0 202 389 0 0 chr2 89386564 89386636 -161301218 - L2 LINE L2 0 3313 3242 329 326 8 23 chr2 89386905 89387034 -161300820 + L3 LINE CR1 577 703 -874 843 304 97 32 chr2 89387261 89387633 -161300221 + L2 LINE L2 2918 3313 0 359 175 0 32 chr2 89387683 89387746 -161300108 + L3 LINE CR1 1404 1464 -113 428 295 85 36 chr2 89388277 89388501 -161299353 - MIR SINE MIR -15 247 13 669 218 123 94 chr2 89388527 89388836 -161299018 + Charlie8 DNA MER1_type 1 300 -252 2446 87 0 0 chr2 89388836 89389134 -161298720 - AluSx SINE Alu -14 298 1 669 218 123 94 chr2 89389134 89389160 -161298694 + Charlie8 DNA MER1_type 300 324 -228 1862 196 93 63 chr2 89389160 89389686 -161298168 + MLT1F LTR MaLR 1 542 0 669 218 123 94 chr2 89389686 89389704 -161298150 + Charlie8 DNA MER1_type 324 340 -212 1273 154 53 0 chr2 89389704 89389931 -161297923 + L1MB3 LINE L1 5945 6183 0 669 218 123 94 chr2 89389931 89390025 -161297829 + Charlie8 DNA MER1_type 340 468 -84 242 268 0 0 chr2 89390100 89390156 -161297698 + Charlie8 DNA MER1_type 1361 1416 -1001 469 259 0 7 chr2 89390235 89390370 -161297484 + MER112 DNA MER1_type 41 174 -86 1225 249 54 26 chr2 89390375 89390592 -161297262 - L1MD2 LINE L1 -16 6343 6109 1910 134 48 0 chr2 89390592 89390884 -161296970 - AluSx SINE Alu -6 306 1 1225 249 54 26 chr2 89390884 89391055 -161296799 - L1MD2 LINE L1 -250 6109 5944 2023 170 77 25 chr2 89391071 89391513 -161296341 - L1MD2 LINE L1 -501 5858 5394 342 274 53 0 chr2 89391523 89391618 -161296236 + MER112 DNA MER1_type 155 254 -6 1703 155 30 30 chr2 89392099 89392403 -161295451 - AluJb SINE Alu -8 304 1 597 254 37 33 chr2 89393436 89393792 -161294062 - LTR16A LTR ERVL -5 445 22 221 75 25 0 chr2 89394148 89394188 -161293666 + (TTATA)n Simple_repeat Simple_repeat 5 45 0 202 272 240 62 chr2 89394711 89395373 -161292481 - L2 LINE L2 -803 2511 1732 292 254 173 9 chr2 89395422 89395532 -161292322 - L2 LINE L2 0 3313 3186 592 191 8 56 chr2 89395624 89395750 -161292104 + FLAM_C SINE Alu 9 128 -15 308 348 92 0 chr2 89396825 89396966 -161290888 + MIR SINE MIR 66 219 -43 281 109 174 0 chr2 89397809 89397855 -161289999 + AluJb SINE Alu 85 138 -164 1706 91 0 0 chr2 89397855 89398064 -161289790 + AluSg1 SINE Alu 1 209 -100 1213 194 5 0 chr2 89398068 89398279 -161289575 + AluJb SINE Alu 85 296 -16 621 196 139 12 chr2 89398501 89398674 -161289180 + L1MD3 LINE L1 7791 7985 -10 * 638 239 92 33 chr2 89398666 89398850 -161289004 + L1ME1 LINE L1 5934 6128 -38 2254 99 0 3 chr2 89398852 89399156 -161288698 - AluSx SINE Alu -9 303 1 766 148 168 15 chr2 89399236 89399438 -161288416 + Charlie1 DNA MER1_type 2378 2610 -151 216 0 0 0 chr2 89399445 89399469 -161288385 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1162 157 11 11 chr2 89399473 89399658 -161288196 - AluSg/x SINE Alu -37 272 88 1077 161 0 6 chr2 89400273 89400441 -161287413 - AluSg/x SINE Alu -10 300 134 2325 89 14 0 chr2 89400443 89400736 -161287118 - AluSc SINE Alu -12 297 1 1482 152 17 51 chr2 89400816 89401263 -161286591 - MER4B-int LTR ERV1 -4466 2292 1678 235 0 0 54 chr2 89401266 89401303 -161286551 + (TCCC)n Simple_repeat Simple_repeat 2 36 0 1841 169 0 19 chr2 89401303 89401616 -161286238 - AluSg SINE Alu -3 307 1 831 206 174 5 chr2 89401616 89401961 -161285893 - MLT2B1 LTR ERVL -55 465 1 2114 138 0 3 chr2 89401987 89402283 -161285571 + AluSx SINE Alu 1 297 -15 198 0 0 0 chr2 89402283 89402305 -161285549 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1748 136 9 97 chr2 89402320 89402471 -161285383 + AluJo SINE Alu 1 107 -205 180 0 0 0 chr2 89402471 89402491 -161285363 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 1748 136 9 97 chr2 89402491 89402678 -161285176 + AluJo SINE Alu 107 309 -3 338 314 129 0 chr2 89402717 89402911 -161284943 + MER20B DNA MER1_type 281 499 -284 2211 76 43 0 chr2 89403023 89403300 -161284554 + AluY SINE Alu 1 289 -22 21 36 0 0 chr2 89403965 89403993 -161283861 + AT_rich Low_complexity Low_complexity 1 28 0 2215 88 0 7 chr2 89403995 89404278 -161283576 + AluSg SINE Alu 1 281 -29 360 105 0 14 chr2 89404282 89404345 -161283509 + Alu SINE Alu 1 44 -258 264 88 0 0 chr2 89404347 89404381 -161283473 + Alu SINE Alu 246 279 -21 702 203 0 0 chr2 89404383 89404531 -161283323 + (TAGA)n Simple_repeat Simple_repeat 3 150 0 1964 126 0 38 chr2 89404534 89404877 -161282977 + AluSx SINE Alu 1 332 0 349 200 168 26 chr2 89404893 89405048 -161282806 - MER112 DNA MER1_type -42 218 42 2236 97 0 10 chr2 89405051 89405362 -161282492 + AluSq SINE Alu 1 308 0 2192 122 3 10 chr2 89405373 89405685 -161282169 + AluSx SINE Alu 1 310 -2 786 223 16 16 chr2 89405790 89405983 -161281871 - MER82 DNA MER2_type -437 216 24 2116 102 38 7 chr2 89405985 89406278 -161281576 + AluSx SINE Alu 1 302 -10 2167 91 37 3 chr2 89406921 89407219 -161280635 - AluSp SINE Alu -5 308 1 2553 65 3 0 chr2 89407448 89407754 -161280100 + AluY SINE Alu 1 307 -4 1863 127 98 0 chr2 89407798 89408074 -161279780 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr2 89408798 89408819 -161279035 + AT_rich Low_complexity Low_complexity 1 21 0 205 184 20 0 chr2 89409439 89409488 -161278366 + L2 LINE L2 3263 3312 -1 882 56 0 0 chr2 89409587 89409694 -161278160 - AluSg/x SINE Alu -7 303 197 682 122 0 10 chr2 89409922 89410020 -161277834 + FLAM_C SINE Alu 33 129 -14 264 122 0 0 chr2 89410020 89410061 -161277793 + (CACG)n Simple_repeat Simple_repeat 1 41 0 310 247 0 12 chr2 89410281 89410366 -161277488 - MIR SINE MIR -122 140 57 2313 98 0 0 chr2 89410951 89411246 -161276608 - AluSg SINE Alu -15 295 1 221 267 78 0 chr2 89412088 89412178 -161275676 - L2 LINE L2 -934 2380 2284 314 193 171 71 chr2 89412722 89412775 -161275079 + LTR50 LTR ERVL 4 50 -745 797 217 94 20 chr2 89412775 89412978 -161274876 + MER20 DNA MER1_type 2 219 0 314 193 171 71 chr2 89412978 89413064 -161274790 + LTR50 LTR ERVL 50 157 -638 648 208 76 15 chr2 89413332 89413529 -161274325 + AluSg/x SINE Alu 101 309 0 1679 148 96 28 chr2 89414159 89414483 -161273371 + MER7A DNA MER2_type 2 345 -1 2345 98 0 10 chr2 89414551 89414858 -161272996 + AluSx SINE Alu 1 304 -8 1017 236 241 12 chr2 89415026 89415446 -161272408 + MER20B DNA MER1_type 119 634 -149 696 198 16 0 chr2 89415491 89415617 -161272237 - AluJb SINE Alu -183 129 2 2281 96 0 3 chr2 89415968 89416261 -161271593 + AluSg SINE Alu 1 292 -18 561 239 82 88 chr2 89416272 89416586 -161271268 + L1MC5 LINE L1 7315 7627 -334 2355 92 3 0 chr2 89416586 89416881 -161270973 + AluSp SINE Alu 1 296 -17 561 239 82 88 chr2 89416881 89417031 -161270823 + L1MC5 LINE L1 7627 7776 -185 2290 78 0 3 chr2 89417041 89417386 -161270468 + AluY SINE Alu 1 344 0 970 126 0 15 chr2 89417413 89417548 -161270306 + AluSg SINE Alu 1 133 -177 2058 95 14 27 chr2 89417548 89417844 -161270010 + AluSg SINE Alu 1 292 -18 1073 143 18 30 chr2 89418025 89418193 -161269661 + AluJb SINE Alu 137 302 -10 260 327 0 19 chr2 89418334 89418438 -161269416 + MER5A DNA MER1_type 86 187 -2 2171 95 20 13 chr2 89419090 89419395 -161268459 + AluSq SINE Alu 1 307 -6 279 290 32 81 chr2 89419551 89419675 -161268179 - L2 LINE L2 -1 3271 3154 541 149 149 52 chr2 89420375 89420529 -161267325 - MER69A DNA AcHobo -8 169 1 2270 63 16 51 chr2 89420675 89420990 -161266864 + AluY SINE Alu 1 304 -7 2004 123 3 23 chr2 89421046 89421346 -161266508 + AluJb SINE Alu 1 294 -18 426 85 0 0 chr2 89421425 89421484 -161266370 + (TGAG)n Simple_repeat Simple_repeat 1 59 0 570 231 184 1 chr2 89421545 89421765 -161266089 + MIR SINE MIR 1 261 -1 963 163 63 77 chr2 89421782 89421886 -161265968 + MER58A DNA MER1_type 3 107 -2313 2052 115 14 14 chr2 89421886 89422044 -161265810 - AluSx SINE Alu -17 295 135 2448 102 0 0 chr2 89422044 89422357 -161265497 - AluSq SINE Alu 0 313 1 2052 115 14 14 chr2 89422357 89422493 -161265361 - AluSx SINE Alu -176 136 1 963 163 63 77 chr2 89422493 89422609 -161265245 + MER58A DNA MER1_type 107 220 -4 2180 126 0 3 chr2 89422791 89423100 -161264754 - AluSx SINE Alu -4 308 1 1668 176 3 40 chr2 89423158 89423341 -161264513 - AluJo SINE Alu -1 311 144 2256 115 0 0 chr2 89423341 89423637 -161264217 - AluSg SINE Alu -14 296 1 1668 176 3 40 chr2 89423637 89423776 -161264078 - AluJo SINE Alu -168 144 1 182 231 0 0 chr2 89424675 89424714 -161263140 + MIR SINE MIR 199 237 -25 1198 96 57 0 chr2 89424848 89425005 -161262849 - AluSp SINE Alu -15 298 133 22 0 0 0 chr2 89425015 89425037 -161262817 + AT_rich Low_complexity Low_complexity 1 22 0 1829 158 7 10 chr2 89425037 89425328 -161262526 - AluJo SINE Alu -22 290 1 4232 141 54 43 chr2 89425340 89425600 -161262254 - L1MB7 LINE L1 -16 6168 5912 2390 86 0 13 chr2 89425600 89425904 -161261950 - AluSx SINE Alu -12 300 1 4232 141 54 43 chr2 89425904 89426403 -161261451 - L1MB7 LINE L1 -272 5912 5397 2208 122 3 6 chr2 89426403 89426714 -161261140 - AluSx SINE Alu 0 312 3 4232 141 54 43 chr2 89426714 89426774 -161261080 - L1MB7 LINE L1 -787 5397 5339 928 195 17 11 chr2 89427073 89427247 -161260607 + AluJb SINE Alu 137 311 -1 254 146 0 36 chr2 89427247 89427302 -161260552 + (GGAA)n Simple_repeat Simple_repeat 1 53 0 1697 47 0 0 chr2 89427302 89427495 -161260359 + AluSc SINE Alu 1 193 -116 667 72 66 0 chr2 89427639 89427806 -161260048 + (TA)n Simple_repeat Simple_repeat 1 178 0 422 269 67 0 chr2 89427896 89428015 -161259839 + MIR SINE MIR 2 128 -134 273 57 0 0 chr2 89429037 89429072 -161258782 + (TATG)n Simple_repeat Simple_repeat 2 36 0 2041 108 3 10 chr2 89429072 89429360 -161258494 - AluSx SINE Alu -26 286 1 26 0 0 0 chr2 89429368 89429394 -161258460 + AT_rich Low_complexity Low_complexity 1 26 0 2085 109 3 3 chr2 89429705 89429989 -161257865 + AluSx SINE Alu 1 284 -28 228 141 172 0 chr2 89430064 89430128 -161257726 - L1MC/D LINE L1 -2320 5488 5414 761 105 26 0 chr2 89430149 89430263 -161257591 - L1MB3 LINE L1 -7 6176 6060 282 342 0 0 chr2 89430300 89430405 -161257449 + polypyrimidine Low_complexity Low_complexity 1 105 0 624 291 16 16 chr2 89430532 89430721 -161257133 - MIR SINE MIR -54 208 20 363 334 121 23 chr2 89431174 89431660 -161256194 + L2 LINE L2 2623 3146 -126 * 674 226 13 13 chr2 89431656 89431811 -161256043 - MER5B DNA MER1_type -7 171 17 2343 106 0 0 chr2 89431871 89432173 -161255681 - AluSx SINE Alu -10 302 1 2205 115 0 3 chr2 89432298 89432593 -161255261 - AluSx SINE Alu -18 294 1 515 181 0 0 chr2 89433352 89433435 -161254419 - MER90 LTR ERV1 -2 612 530 698 151 24 0 chr2 89433480 89433605 -161254249 - MER90 LTR ERV1 -94 520 393 2103 158 15 38 chr2 89433605 89433666 -161254188 - MLT1B LTR MaLR -1 389 328 2342 104 0 0 chr2 89433666 89433964 -161253890 - AluSx SINE Alu -14 298 1 2103 158 15 38 chr2 89433964 89434119 -161253735 - MLT1B LTR MaLR -62 328 171 1602 188 7 20 chr2 89434119 89434422 -161253432 - AluJo SINE Alu -12 300 2 2103 158 15 38 chr2 89434422 89434596 -161253258 - MLT1B LTR MaLR -219 171 7 1940 181 25 11 chr2 89434604 89434964 -161252890 - MER90 LTR ERV1 -249 365 1 1416 190 15 26 chr2 89435255 89435524 -161252330 - MLT1E LTR MaLR 0 593 328 566 129 21 0 chr2 89435632 89435725 -161252129 - MSTD LTR MaLR -4 392 298 614 243 65 27 chr2 89435739 89435924 -161251930 - MLT1E LTR MaLR -382 211 20 1522 175 166 6 chr2 89436227 89436565 -161251289 + MSTD LTR MaLR 1 392 -4 207 71 24 48 chr2 89437003 89437045 -161250809 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 1547 180 49 84 chr2 89437125 89437233 -161250621 + L1M4 LINE L1 2722 2832 -3314 272 29 0 0 chr2 89437233 89437267 -161250587 - HSMAR1 DNA Mariner -1253 34 1 1547 180 49 84 chr2 89437267 89437613 -161250241 + L1M4 LINE L1 2832 3192 -2954 240 35 0 0 chr2 89437751 89437780 -161250074 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 421 152 0 0 chr2 89437786 89437852 -161250002 - AluJ/FRAM SINE Alu -30 282 217 212 284 86 25 chr2 89438508 89438589 -161249265 - MIR SINE MIR -24 238 153 24 32 0 0 chr2 89439071 89439102 -161248752 + GC_rich Low_complexity Low_complexity 1 31 0 294 311 34 17 chr2 89439736 89439855 -161247999 - MIR3 SINE MIR -17 191 71 236 261 14 14 chr2 89439907 89439976 -161247878 - MIR SINE MIR -115 147 79 283 149 11 138 chr2 89440688 89440735 -161247119 - Charlie1 DNA MER1_type -13 2748 2715 1716 151 17 7 chr2 89440735 89441033 -161246821 + AluJb SINE Alu 1 301 -11 283 149 11 138 chr2 89441033 89441072 -161246782 - Charlie1 DNA MER1_type -46 2715 2673 1097 156 76 0 chr2 89441086 89441297 -161246557 - Charlie1 DNA MER1_type -2534 227 1 2250 104 0 13 chr2 89441673 89441971 -161245883 - AluSg SINE Alu -16 294 1 1233 253 68 11 chr2 89441971 89442330 -161245524 + L2 LINE L2 2926 3308 -5 911 228 0 0 chr2 89442585 89442765 -161245089 - FRAM SINE Alu -4 172 1 197 260 100 100 chr2 89443199 89443299 -161244555 - L2 LINE L2 0 3272 3173 201 279 0 0 chr2 89443557 89443600 -161244254 + MIR SINE MIR 8 50 -212 2466 276 127 29 chr2 89443619 89444192 -161243662 + L2 LINE L2 1849 2365 -948 1864 148 59 7 chr2 89444192 89444482 -161243372 - AluJo SINE Alu -1 311 7 2466 276 127 29 chr2 89444482 89445076 -161242778 + L2 LINE L2 2365 3124 -189 384 158 24 49 chr2 89445742 89445824 -161242030 + L2 LINE L2 3227 3306 -7 2122 108 20 16 chr2 89446771 89447077 -161240777 - AluSx SINE Alu -5 307 1 2234 109 3 3 chr2 89447081 89447383 -161240471 - AluSx SINE Alu -10 302 1 825 226 90 0 chr2 89447383 89447560 -161240294 - MER82 DNA MER2_type -460 193 1 201 74 0 0 chr2 89447653 89447680 -161240174 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 1876 178 34 0 chr2 89447690 89447988 -161239866 - AluJb SINE Alu -4 308 1 773 204 11 66 chr2 89448374 89448432 -161239422 - MER5B DNA MER1_type -7 171 111 2329 84 3 17 chr2 89448432 89448730 -161239124 + AluSg SINE Alu 1 294 -16 773 204 11 66 chr2 89448730 89448852 -161239002 - MER5B DNA MER1_type -67 111 1 572 206 20 0 chr2 89449116 89449218 -161238636 + MER5B DNA MER1_type 68 171 -7 2186 109 20 0 chr2 89450224 89450518 -161237336 - AluSx SINE Alu -12 300 1 799 113 0 0 chr2 89451533 89451648 -161236206 - L1PA5 LINE L1 0 6154 6040 411 145 0 0 chr2 89451651 89451720 -161236134 + (TTAA)n Simple_repeat Simple_repeat 1 69 0 6122 44 5 1 chr2 89451748 89452862 -161234992 - L1PA5 LINE L1 -131 6023 4904 1916 138 62 0 chr2 89453137 89453413 -161234441 - AluSx SINE Alu -19 293 1 336 301 36 1 chr2 89453413 89453520 -161234334 + MIR SINE MIR 77 188 -62 656 226 110 94 chr2 89453773 89454092 -161233762 + MER102b DNA MER1_type 1 324 -17 216 226 108 43 chr2 89455613 89455706 -161232148 - MIR SINE MIR -92 116 18 2064 148 159 5 chr2 89455708 89456099 -161231755 - LTR32 LTR ERVL 0 471 21 1982 78 0 0 chr2 89456372 89456616 -161231238 + AluY SINE Alu 68 311 0 2545 34 41 0 chr2 89456684 89456976 -161230878 + AluY SINE Alu 1 304 -7 2638 102 7 46 chr2 89458642 89459075 -161228779 + MER1A DNA MER1_type 97 512 -17 1887 150 75 32 chr2 89459625 89459999 -161227855 - MLT1B LTR MaLR 0 390 1 484 82 47 71 chr2 89460210 89460295 -161227559 + AluJo SINE Alu 61 143 -169 986 177 21 5 chr2 89460361 89460547 -161227307 + MER5A DNA MER1_type 1 189 0 213 256 132 62 chr2 89460763 89460892 -161226962 + L2 LINE L2 3169 3306 -7 705 208 8 0 chr2 89461240 89461370 -161226484 - FLAM_C SINE Alu -2 131 1 302 296 0 0 chr2 89461391 89461462 -161226392 - tRNA-Val-GTG tRNA tRNA -3 73 3 1877 167 3 23 chr2 89462037 89462343 -161225511 + AluJo SINE Alu 1 300 -12 1435 182 101 43 chr2 89463025 89463393 -161224461 - MLT1B LTR MaLR 0 390 2 585 290 52 5 chr2 89465624 89465817 -161222037 + MIR SINE MIR 13 214 -48 1240 130 14 10 chr2 89465897 89466105 -161221749 + MER2 DNA MER2_type 1 209 -136 23 33 0 0 chr2 89466106 89466136 -161221718 + AT_rich Low_complexity Low_complexity 1 30 0 204 115 39 19 chr2 89466139 89466191 -161221663 + (TA)n Simple_repeat Simple_repeat 2 54 0 2057 106 29 0 chr2 89466191 89466465 -161221389 - AluSg SINE Alu -24 286 5 1115 157 89 122 chr2 89466469 89466613 -161221241 - MLT1C LTR MaLR -85 382 235 2792 94 11 3 chr2 89466613 89466985 -161220869 + THE1C LTR MaLR 1 375 0 1115 157 89 122 chr2 89466985 89467235 -161220619 - MLT1C LTR MaLR -232 235 1 350 233 142 42 chr2 89468325 89468445 -161219409 - L3 LINE CR1 -32 1545 1414 264 306 161 16 chr2 89468593 89468786 -161219068 + L3 LINE CR1 1326 1546 -31 216 0 0 0 chr2 89469186 89469210 -161218644 + (CAGGA)n Simple_repeat Simple_repeat 5 28 0 201 167 0 0 chr2 89469869 89469905 -161217949 + (TTA)n Simple_repeat Simple_repeat 3 38 0 193 225 0 0 chr2 89470557 89470597 -161217257 - MER5B DNA MER1_type -2 176 137 1958 129 7 0 chr2 89471350 89471622 -161216232 + AluSx SINE Alu 9 282 -30 190 57 94 0 chr2 89471646 89471699 -161216155 + (TA)n Simple_repeat Simple_repeat 1 58 0 648 97 0 0 chr2 89471794 89471887 -161215967 + (TCTA)n Simple_repeat Simple_repeat 3 95 0 1854 204 107 23 chr2 89472050 89472481 -161215373 + MLT1C LTR MaLR 1 467 0 428 200 171 9 chr2 89474323 89474428 -161213426 + L2 LINE L2 3192 3313 0 2318 106 0 3 chr2 89474845 89475147 -161212707 - AluSx SINE Alu -11 301 1 2709 90 28 0 chr2 89475697 89476051 -161211803 - THE1B LTR MaLR 0 364 1 1221 141 117 144 chr2 89476349 89476724 -161211130 + MLT1A1 LTR MaLR 1 365 0 523 213 7 50 chr2 89477349 89477460 -161210394 - MER103 DNA DNA -10 156 51 1563 138 13 0 chr2 89477460 89477685 -161210169 - AluSg/x SINE Alu -1 311 84 523 213 7 50 chr2 89477685 89477714 -161210140 - MER103 DNA DNA -115 51 22 208 338 154 17 chr2 89477822 89478056 -161209798 - L3 LINE CR1 -307 1270 1005 246 279 252 9 chr2 89481630 89481741 -161206113 + MIR3 SINE MIR 17 154 -54 6679 224 42 29 chr2 89481755 89482922 -161204932 + L1M4 LINE L1 15 1235 -5411 2277 127 0 0 chr2 89482922 89483229 -161204625 + AluSq SINE Alu 1 307 -6 6679 224 42 29 chr2 89483229 89483925 -161203929 + L1M4 LINE L1 1235 1921 -4725 418 213 8 16 chr2 89483926 89484048 -161203806 - L1MCb LINE L1 -3437 3127 3007 * 1471 217 17 25 chr2 89484030 89484252 -161203602 - L1MCb LINE L1 -4981 1064 845 1388 189 45 89 chr2 89484252 89484499 -161203355 + MLT1A1 LTR MaLR 1 227 -138 1913 157 0 17 chr2 89484499 89484798 -161203056 + AluJb SINE Alu 1 294 -18 1388 189 45 89 chr2 89484798 89484932 -161202922 + MLT1A1 LTR MaLR 227 365 0 1471 217 17 25 chr2 89484932 89485114 -161202740 - L1MCb LINE L1 -5200 845 663 3138 155 47 14 chr2 89485116 89485798 -161202056 + L1MB7 LINE L1 5440 6183 0 2398 95 0 0 chr2 89487402 89487698 -161200156 - AluSx SINE Alu -16 296 1 225 211 39 0 chr2 89487728 89487780 -161200074 + L2 LINE L2 2998 3051 -262 * 235 343 50 21 chr2 89487778 89487918 -161199936 + MIR SINE MIR 39 182 -80 1806 201 51 5 chr2 89488825 89489198 -161198656 - MLT1B LTR MaLR 0 390 1 183 250 0 50 chr2 89489431 89489491 -161198363 + L2 LINE L2 2425 2481 -833 370 123 58 23 chr2 89490216 89490387 -161197467 + (TG)n Simple_repeat Simple_repeat 2 178 0 219 102 68 17 chr2 89490398 89490457 -161197397 + (TG)n Simple_repeat Simple_repeat 1 62 0 337 136 68 19 chr2 89490468 89490630 -161197224 + (TG)n Simple_repeat Simple_repeat 2 171 0 586 79 51 40 chr2 89490675 89490852 -161197002 + (TG)n Simple_repeat Simple_repeat 2 180 0 268 266 0 25 chr2 89490902 89490981 -161196873 + MER5B DNA MER1_type 97 173 -5 2389 182 47 11 chr2 89492160 89492626 -161195228 - MLT1D LTR MaLR 0 505 23 233 268 165 8 chr2 89492755 89492882 -161194972 - MIR SINE MIR -27 235 89 234 241 0 0 chr2 89493288 89493346 -161194508 + L1ME4a LINE L1 6063 6120 -1 2163 104 0 7 chr2 89493384 89493684 -161194170 + AluSg1 SINE Alu 1 298 0 219 275 110 11 chr2 89493703 89493794 -161194060 + MIR3 SINE MIR 85 184 -24 198 214 0 0 chr2 89494053 89494095 -161193759 - L2 LINE L2 -11 3302 3261 2112 157 0 20 chr2 89494191 89494535 -161193319 - MER1B DNA MER1_type 0 337 1 188 240 20 20 chr2 89494576 89494626 -161193228 + MIR SINE MIR 102 151 -57 191 243 176 0 chr2 89494646 89494720 -161193134 - L2 LINE L2 -36 3277 3191 970 119 0 0 chr2 89495535 89495669 -161192185 + FRAM SINE Alu 35 168 -8 329 361 76 0 chr2 89496817 89496961 -161190893 - L2 LINE L2 -21 3251 3097 185 159 23 0 chr2 89496965 89497009 -161190845 + (TG)n Simple_repeat Simple_repeat 2 46 0 201 191 24 0 chr2 89497165 89497207 -161190647 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 186 304 0 29 chr2 89497363 89497432 -161190422 - L2 LINE L2 -553 2761 2695 303 296 132 13 chr2 89500969 89501121 -161186733 + MIR3 SINE MIR 19 188 -20 2115 129 3 7 chr2 89501130 89501424 -161186430 - AluSx SINE Alu -19 293 1 916 187 73 117 chr2 89501439 89501702 -161186152 - L1MC5 LINE L1 -393 7568 7326 1536 117 18 0 chr2 89501702 89501925 -161185929 - AluJo SINE Alu -1 311 85 916 187 73 117 chr2 89501925 89502046 -161185808 - L1MC5 LINE L1 -635 7326 7201 2494 133 67 5 chr2 89502186 89502591 -161185263 + MSTB1 LTR MaLR 3 432 0 831 144 0 30 chr2 89502597 89502729 -161185125 - FLAM_A SINE Alu -5 128 1 341 270 31 95 chr2 89502785 89503233 -161184621 - L1M4c LINE L1 -857 1886 1270 207 100 0 0 chr2 89503463 89503493 -161184361 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 2017 114 7 7 chr2 89503493 89503774 -161184080 - AluSq SINE Alu -32 281 1 212 294 59 0 chr2 89505155 89505223 -161182631 + MER91A DNA MER1_type 125 196 0 319 311 25 8 chr2 89505705 89505824 -161182030 - MIR SINE MIR -140 122 2 21 57 0 0 chr2 89505858 89505893 -161181961 + AT_rich Low_complexity Low_complexity 1 35 0 2231 114 3 0 chr2 89508339 89508637 -161179217 - AluSx SINE Alu -13 299 1 878 283 69 38 chr2 89510197 89510618 -161177236 + MLT1J LTR MaLR 47 480 -31 514 333 11 6 chr2 89511119 89511293 -161176561 - MER5A DNA MER1_type -5 184 10 372 94 0 0 chr2 89512042 89512095 -161175759 + (CA)n Simple_repeat Simple_repeat 1 53 0 218 279 79 36 chr2 89513012 89513152 -161174702 + L2 LINE L2 1272 1417 -1897 2580 66 0 0 chr2 89513573 89513878 -161173976 - AluY SINE Alu -6 305 1 541 189 254 18 chr2 89513970 89514139 -161173715 + MER3 DNA MER1_type 1 209 0 1766 121 25 4 chr2 89514676 89514956 -161172898 - L1MB1 LINE L1 -1 6167 5882 1529 190 9 61 chr2 89515083 89515410 -161172444 + AluJo SINE Alu 1 310 -2 509 126 11 0 chr2 89515410 89515497 -161172357 + L1MB4 LINE L1 6093 6180 0 452 290 155 78 chr2 89515595 89515991 -161171863 - L1ME4a LINE L1 0 6121 5757 2248 120 3 0 chr2 89515991 89516291 -161171563 - AluSx SINE Alu -11 301 1 452 290 155 78 chr2 89516291 89516676 -161171178 - L1ME4a LINE L1 -364 5757 5280 1675 148 4 4 chr2 89516763 89517027 -161170827 - L1PA16 LINE L1 -20 6146 5883 * 5807 229 37 46 chr2 89517005 89518306 -161169548 - L1PBb LINE L1 -3005 3792 2481 2123 130 16 3 chr2 89518306 89518614 -161169240 - AluSx SINE Alu 0 312 1 5807 229 37 46 chr2 89518614 89518956 -161168898 - L1PBb LINE L1 -4316 2481 2137 3995 16 0 0 chr2 89518956 89519405 -161168449 - L1PA2 LINE L1 0 6155 5707 5807 229 37 46 chr2 89519405 89520130 -161167724 - L1PBb LINE L1 -4660 2137 1380 2416 112 0 0 chr2 89520928 89521240 -161166614 + AluSx SINE Alu 1 312 0 245 318 68 52 chr2 89521325 89521576 -161166278 - L1M2 LINE L1 -5277 1561 704 415 355 33 25 chr2 89521686 89521962 -161165892 - L1PBb LINE L1 -6348 439 162 24 67 0 0 chr2 89523330 89523375 -161164479 + AT_rich Low_complexity Low_complexity 1 45 0 740 195 0 0 chr2 89523381 89523499 -161164355 - FLAM_A SINE Alu -14 119 2 22 35 0 0 chr2 89523969 89523998 -161163856 + AT_rich Low_complexity Low_complexity 1 29 0 239 0 0 31 chr2 89524869 89524901 -161162953 + (TTTTA)n Simple_repeat Simple_repeat 4 34 0 7689 18 0 0 chr2 89524901 89526294 -161161560 - L1PA3 LINE L1 -16 6139 4736 243 204 0 0 chr2 89526973 89527027 -161160827 + (TG)n Simple_repeat Simple_repeat 1 54 0 3155 178 16 13 chr2 89527661 89528272 -161159582 - L1MA10 LINE L1 -13 6321 5709 211 234 16 0 chr2 89528505 89528569 -161159285 + (TA)n Simple_repeat Simple_repeat 1 65 0 3763 170 65 31 chr2 89528569 89528997 -161158857 - L1MB8 LINE L1 -63 6115 5703 2446 97 0 0 chr2 89528997 89529306 -161158548 - AluSg SINE Alu -1 309 1 3763 170 65 31 chr2 89529306 89530158 -161157696 - L1MB8 LINE L1 -475 5703 4783 7651 120 12 3 chr2 89530162 89531287 -161156567 - HSMAR2 DNA Mariner -49 1253 118 698 250 29 21 chr2 89531593 89531828 -161156026 - L1MB8 LINE L1 -1350 4796 4574 183 129 0 0 chr2 89531910 89531941 -161155913 + (GGAGAA)n Simple_repeat Simple_repeat 6 36 0 709 235 148 5 chr2 89532478 89532674 -161155180 + MIR SINE MIR 18 241 -21 1974 169 3 0 chr2 89533765 89534072 -161153782 - AluJb SINE Alu -4 308 1 366 42 0 0 chr2 89534074 89534122 -161153732 + (TTCA)n Simple_repeat Simple_repeat 2 49 0 695 227 130 105 chr2 89536169 89536578 -161151276 + L2 LINE L2 2893 3311 -2 271 178 43 172 chr2 89536861 89537024 -161150830 - MIR3 SINE MIR -3 205 64 207 204 0 0 chr2 89537056 89537100 -161150754 + T-rich Low_complexity Low_complexity 1 44 0 309 247 113 93 chr2 89538904 89539098 -161148756 - L1ME3A LINE L1 -29 6141 5944 417 246 51 7 chr2 89539109 89539239 -161148615 - L1ME3A LINE L1 -6 6158 6024 5877 236 39 7 chr2 89539279 89541429 -161146425 + L1PA16 LINE L1 797 3079 -3124 1691 156 43 3 chr2 89541429 89541711 -161146143 + AluJb SINE Alu 3 295 -17 5877 236 39 7 chr2 89541711 89541901 -161145953 + L1PA16 LINE L1 3079 3261 -2942 4417 50 0 2 chr2 89542961 89543503 -161144351 - L1PA5 LINE L1 -3 6151 5611 1169 29 0 0 chr2 89543503 89543642 -161144212 + L1PA5 LINE L1 5472 5610 -544 8950 185 45 16 chr2 89544229 89547140 -161140714 + L1PA16 LINE L1 3230 6220 -3 5366 222 103 28 chr2 89547145 89548906 -161138948 - L1M4 LINE L1 -3215 3429 1801 2116 139 3 0 chr2 89548906 89549209 -161138645 - AluSp SINE Alu -9 304 1 1696 183 0 23 chr2 89549213 89549514 -161138340 - AluJo SINE Alu -17 295 2 5366 222 103 28 chr2 89549514 89550830 -161137024 - L1M4 LINE L1 -4845 1799 71 946 164 172 27 chr2 89550846 89551102 -161136752 - LTR18B LTR ERVL 0 614 322 1033 183 44 0 chr2 89551106 89551286 -161136568 - LTR18B LTR ERVL -426 188 1 1028 249 117 17 chr2 89551343 89552164 -161135690 - L1M4 LINE L1 -1464 4682 2895 483 256 85 12 chr2 89552241 89552593 -161135261 - L1MEd LINE L1 -971 1519 1048 210 174 0 0 chr2 89552633 89552679 -161135175 + (TA)n Simple_repeat Simple_repeat 1 46 0 1696 180 28 3 chr2 89552681 89552965 -161134889 - AluJo SINE Alu -21 291 1 285 309 32 24 chr2 89553540 89553663 -161134191 - L1MEd LINE L1 -5944 175 52 616 280 109 40 chr2 89553674 89554427 -161133427 - L1M4 LINE L1 -3138 3008 2204 405 290 36 26 chr2 89555144 89555337 -161132517 - L1ME3A LINE L1 -286 5884 5690 * 1241 149 55 18 chr2 89555328 89555585 -161132269 + L1PA16 LINE L1 5695 5911 -255 474 263 71 20 chr2 89555608 89555981 -161131873 - L1ME3A LINE L1 -511 5659 5241 1589 240 15 54 chr2 89556013 89556445 -161131409 + MLT2B1 LTR ERVL 3 513 -41 483 18 0 0 chr2 89556445 89556501 -161131353 + (CA)n Simple_repeat Simple_repeat 1 56 0 1589 240 15 54 chr2 89556501 89556542 -161131312 + MLT2B1 LTR ERVL 513 554 0 413 322 41 48 chr2 89557748 89558018 -161129836 + L2 LINE L2 1565 1832 -1482 756 268 28 0 chr2 89558160 89558339 -161129515 - MER91B DNA MER1_type -5 185 2 417 39 0 0 chr2 89558393 89558444 -161129410 + (TG)n Simple_repeat Simple_repeat 2 52 0 186 321 131 0 chr2 89558629 89558713 -161129141 + MIR SINE MIR 39 133 -75 2910 181 9 12 chr2 89558741 89559305 -161128549 - L1PB4 LINE L1 -12 6144 5583 917 201 0 0 chr2 89559306 89559460 -161128394 + FRAM SINE Alu 1 154 -22 8384 164 15 46 chr2 89559469 89560684 -161127170 - L1PB4 LINE L1 -722 5581 4466 2069 144 0 3 chr2 89560684 89560990 -161126864 - AluSx SINE Alu -7 305 1 8384 164 15 46 chr2 89560990 89561842 -161126012 - L1PB4 LINE L1 -1837 4466 3589 6041 192 50 23 chr2 89564010 89564078 -161123776 + L1MB8 LINE L1 3942 4007 -2176 2131 93 84 32 chr2 89564078 89564421 -161123433 - THE1B LTR MaLR 0 364 4 6041 192 50 23 chr2 89564421 89564765 -161123089 + L1MB8 LINE L1 4007 4340 -1843 1931 188 58 11 chr2 89564765 89565142 -161122712 - MSTD LTR MaLR -1 395 1 6041 192 50 23 chr2 89565142 89565735 -161122119 + L1MB8 LINE L1 4340 4916 -1267 2182 89 3 7 chr2 89565735 89566017 -161121837 + AluSq SINE Alu 1 281 -32 222 37 0 0 chr2 89566018 89566045 -161121809 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 6041 192 50 23 chr2 89566045 89566094 -161121760 + L1MB8 LINE L1 4916 4962 -1221 2333 92 3 0 chr2 89566094 89566388 -161121466 + AluSc SINE Alu 1 295 -14 6041 192 50 23 chr2 89566388 89566436 -161121418 + L1MB8 LINE L1 4962 5007 -1176 2109 91 11 0 chr2 89566436 89566710 -161121144 - AluSp SINE Alu -6 307 31 6041 192 50 23 chr2 89566710 89567754 -161120100 + L1MB8 LINE L1 5007 6175 -8 1029 178 22 0 chr2 89568291 89568476 -161119378 + MER5A DNA MER1_type 1 189 0 774 167 56 126 chr2 89569495 89569731 -161118123 - L1MC5 LINE L1 -36 7925 7719 1794 163 31 7 chr2 89569731 89570025 -161117829 + AluJb SINE Alu 1 301 -11 774 167 56 126 chr2 89570025 89570129 -161117725 - L1MC5 LINE L1 -242 7719 7609 271 232 85 0 chr2 89570222 89570304 -161117550 - L1MC5 LINE L1 -390 7571 7483 318 283 120 40 chr2 89570642 89570918 -161116936 + L2 LINE L2 711 1008 -2306 2549 180 9 0 chr2 89571027 89571449 -161116405 + MSTB LTR MaLR 1 426 0 8297 188 25 25 chr2 89571449 89573101 -161114753 + MSTB-int LTR MaLR 1 1651 0 2555 178 12 0 chr2 89573101 89573522 -161114332 + MSTB LTR MaLR 1 426 0 305 336 59 41 chr2 89573760 89574099 -161113755 + L2 LINE L2 1977 2321 -993 2390 72 0 3 chr2 89574527 89574832 -161113022 - AluY SINE Alu -7 304 1 406 356 46 4 chr2 89575374 89575613 -161112241 + L1M4 LINE L1 2266 2514 -3632 1985 133 3 3 chr2 89576390 89576676 -161111178 - AluSx SINE Alu -26 286 1 207 188 12 38 chr2 89577483 89577563 -161110291 + GA-rich Low_complexity Low_complexity 3 80 0 1023 155 40 11 chr2 89577619 89577793 -161110061 - MER20 DNA MER1_type 0 219 41 1412 295 32 10 chr2 89578039 89578484 -161109370 + L1PA16 LINE L1 -734 454 -6395 231 344 33 16 chr2 89578576 89578698 -161109156 + L1M2 LINE L1 664 787 -6062 314 385 34 8 chr2 89579080 89579197 -161108657 + L1M2 LINE L1 666 785 -6064 1267 251 12 42 chr2 89579219 89579550 -161108304 + L1PA16 LINE L1 443 763 -6085 13092 219 26 22 chr2 89579942 89585324 -161102530 + L1PA16 LINE L1 1446 6868 0 2194 45 26 0 chr2 89585804 89586069 -161101785 + AluY SINE Alu 29 300 -11 706 229 48 26 chr2 89586109 89586336 -161101518 + L1ME3A LINE L1 5939 6170 0 200 261 14 14 chr2 89586363 89586432 -161101422 + (TA)n Simple_repeat Simple_repeat 1 69 0 2491 181 32 2 chr2 89587419 89587911 -161099943 - L1MB8 LINE L1 -9 6169 5663 531 178 0 30 chr2 89587911 89588012 -161099842 + MER46A DNA MER2_type 139 236 0 3996 261 95 19 chr2 89588012 89589262 -161098592 - L1M4b LINE L1 -5505 1354 10 1624 76 36 13 chr2 89589540 89589764 -161098090 - MER30 DNA MER1_type -1 229 1 205 323 71 20 chr2 89590623 89590722 -161097132 + MIR SINE MIR 22 125 -137 615 308 34 10 chr2 89590821 89591029 -161096825 + MIR SINE MIR 2 214 -48 322 328 107 0 chr2 89591696 89591827 -161096027 - MIR3 SINE MIR -55 153 9 2097 131 30 56 chr2 89591913 89592286 -161095568 - THE1B LTR MaLR -1 363 1 1010 160 38 47 chr2 89592663 89592875 -161094979 + MER6B DNA MER2_type 1 210 0 23 0 0 0 chr2 89593406 89593429 -161094425 + AT_rich Low_complexity Low_complexity 1 23 0 2414 37 37 0 chr2 89593429 89593729 -161094125 - L1PA4 LINE L1 0 6155 5845 187 292 185 62 chr2 89595065 89595195 -161092659 - L2 LINE L2 -5 3267 3122 740 246 74 58 chr2 89595240 89595587 -161092267 + MLT1H1 LTR MaLR 11 404 -163 31 58 0 0 chr2 89596862 89596914 -161090940 + AT_rich Low_complexity Low_complexity 1 52 0 2419 89 0 0 chr2 89596966 89597270 -161090584 - AluSx SINE Alu -8 304 1 1028 175 145 0 chr2 89598466 89598735 -161089119 - MER33 DNA MER1_type 0 324 17 872 265 100 50 chr2 89599350 89599638 -161088216 + HAL1 LINE L1 11 332 -2175 2862 10 0 0 chr2 89599638 89599948 -161087906 + AluYa5 SINE Alu 1 310 -1 872 265 100 50 chr2 89599948 89600120 -161087734 + HAL1 LINE L1 332 494 -2013 420 37 0 0 chr2 89600292 89600346 -161087508 + (TG)n Simple_repeat Simple_repeat 2 55 0 1834 164 3 40 chr2 89600393 89600717 -161087137 + AluJb SINE Alu 1 312 0 330 189 23 83 chr2 89600737 89600869 -161086985 + HAL1 LINE L1 2384 2507 0 203 264 0 56 chr2 89601473 89601545 -161086309 - L2 LINE L2 -182 3090 3023 560 283 59 25 chr2 89602562 89602799 -161085055 - MIR SINE MIR -10 252 8 240 253 25 0 chr2 89603796 89603875 -161083979 + (TA)n Simple_repeat Simple_repeat 2 82 0 320 213 100 0 chr2 89604037 89604117 -161083737 + L1MC4 LINE L1 6616 6703 -1339 551 314 47 5 chr2 89604924 89605115 -161082739 + MIR SINE MIR 16 214 -48 184 316 95 0 chr2 89605363 89605458 -161082396 - MIR SINE MIR -82 180 77 1241 140 0 9 chr2 89605556 89605778 -161082076 - L1MA3 LINE L1 -103 6202 5983 822 182 13 87 chr2 89607482 89607713 -161080141 + MER58C DNA MER1_type 1 214 -1 344 297 108 0 chr2 89607849 89608071 -161079783 + MER112 DNA MER1_type 1 246 -14 667 289 12 0 chr2 89608529 89608695 -161079159 + MIR SINE MIR 90 257 -5 180 167 104 0 chr2 89608912 89608960 -161078894 + L2 LINE L2 2925 2977 -337 215 255 0 0 chr2 89609109 89609156 -161078698 + CT-rich Low_complexity Low_complexity 2 48 0 186 133 0 0 chr2 89609332 89609362 -161078492 + (TTC)n Simple_repeat Simple_repeat 2 31 0 260 298 21 11 chr2 89610464 89610558 -161077296 + MIR3 SINE MIR 102 196 -12 400 313 78 0 chr2 89611018 89611146 -161076708 + MIR3 SINE MIR 15 152 -56 288 328 44 38 chr2 89611149 89611332 -161076522 + MER20B DNA MER1_type 1 184 -599 694 172 11 28 chr2 89611553 89611733 -161076121 + CT-rich Low_complexity Low_complexity 1 177 0 1985 135 13 22 chr2 89611748 89612060 -161075794 - AluSq SINE Alu -4 309 1 257 235 20 39 chr2 89613450 89613552 -161074302 + A-rich Low_complexity Low_complexity 5 104 0 1828 206 3 0 chr2 89613678 89614018 -161073836 + MER58B DNA MER1_type 1 341 0 265 354 15 31 chr2 89615577 89615707 -161072147 + L2 LINE L2 3032 3159 -113 27 29 0 0 chr2 89616542 89616576 -161071278 + AT_rich Low_complexity Low_complexity 1 34 0 2176 96 24 0 chr2 89617381 89617673 -161070181 + AluY SINE Alu 1 299 -12 347 323 96 32 chr2 89617863 89618083 -161069771 - MIR SINE MIR -13 249 16 2929 88 31 12 chr2 89618358 89618778 -161069076 + MSTA LTR MaLR 1 428 0 283 287 88 59 chr2 89619249 89619385 -161068469 + L2 LINE L2 3133 3272 0 2781 263 101 5 chr2 89619438 89620296 -161067558 + L2 LINE L2 989 1929 -1385 3547 120 26 2 chr2 89621014 89621580 -161066274 - L1PA16 LINE L1 0 6166 5587 265 109 18 0 chr2 89622329 89622384 -161065470 - Charlie4 DNA MER1_type -81 1880 1825 314 387 35 6 chr2 89624560 89624733 -161063121 - L1ME LINE L1 -285 5836 5659 419 288 67 45 chr2 89624750 89625087 -161062767 - L1ME LINE L1 -521 5600 5257 2285 83 24 0 chr2 89626464 89626754 -161061100 - AluY SINE Alu -14 297 1 606 28 0 0 chr2 89627729 89627801 -161060053 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 1329 210 39 27 chr2 89628321 89628655 -161059199 + MER58B DNA MER1_type 3 340 -1 286 324 123 6 chr2 89629388 89629558 -161058296 - L3 LINE CR1 -140 1437 1248 667 336 122 30 chr2 89629844 89630344 -161057510 + L3 LINE CR1 760 1305 -272 247 265 20 49 chr2 89630337 89630439 -161057415 + MIR SINE MIR 15 113 -149 * 848 246 95 23 chr2 89630439 89630753 -161057101 + MLT1G1 LTR MaLR 1 299 -291 250 298 86 45 chr2 89631024 89631222 -161056632 + L3 LINE CR1 1323 1528 -49 2213 109 0 13 chr2 89631960 89632263 -161055591 - AluSx SINE Alu -13 299 1 25 0 0 0 chr2 89632661 89632686 -161055168 + AT_rich Low_complexity Low_complexity 1 25 0 367 271 47 19 chr2 89632799 89632906 -161054948 - L2 LINE L2 -1 3271 3162 288 343 86 0 chr2 89632900 89633040 -161054814 + L3 LINE CR1 1188 1339 -238 * 1210 192 9 9 chr2 89633319 89633543 -161054311 - MER58A DNA MER1_type 0 224 1 2110 129 3 3 chr2 89634014 89634308 -161053546 - AluSg SINE Alu -16 294 1 783 165 8 0 chr2 89634414 89634547 -161053307 - AluJo SINE Alu -178 134 1 36 53 0 0 chr2 89634558 89634615 -161053239 + AT_rich Low_complexity Low_complexity 1 57 0 2480 87 0 0 chr2 89636335 89636644 -161051210 + AluSq SINE Alu 1 309 -4 1599 292 226 8 chr2 89636780 89638366 -161049488 - L2 LINE L2 -39 3274 1347 339 282 145 8 chr2 89639379 89639634 -161048220 + L2 LINE L2 2813 3102 -211 276 211 0 0 chr2 89640262 89640314 -161047540 + L2 LINE L2 3262 3313 0 505 291 24 18 chr2 89642985 89643150 -161044704 - MIR SINE MIR -21 241 76 2832 209 36 3 chr2 89643243 89643852 -161044002 + MER82 DNA MER2_type 11 639 -14 1669 161 0 4 chr2 89643997 89644264 -161043590 + AluJb SINE Alu 36 301 -11 290 340 46 41 chr2 89644328 89644522 -161043332 - L2 LINE L2 -193 3079 2885 668 281 39 42 chr2 89645582 89645804 -161042050 + MIR SINE MIR 3 230 -32 3132 79 4 60 chr2 89645957 89646427 -161041427 + MLT2A1 LTR ERVL 1 444 0 217 274 194 29 chr2 89646787 89646962 -161040892 + L2 LINE L2 3020 3223 -49 1961 120 106 19 chr2 89647020 89647379 -161040475 + MLT1B LTR MaLR 1 390 0 429 20 0 0 chr2 89651061 89651111 -161036743 + (CA)n Simple_repeat Simple_repeat 1 50 0 370 230 95 0 chr2 89651604 89651730 -161036124 + MER112 DNA MER1_type 19 156 -104 38608 68 10 3 chr2 89651751 89657859 -161029995 - L1PA5 LINE L1 -1 6153 2 396 274 24 0 chr2 89657923 89658047 -161029807 - L1ME3 LINE L1 -39 6123 5997 1072 249 67 22 chr2 89658064 89658724 -161029130 - L1M4 LINE L1 -1357 4789 4085 3619 235 79 40 chr2 89658972 89660013 -161027841 - L1MC4 LINE L1 -287 7755 6649 1557 213 7 0 chr2 89660013 89660299 -161027555 - AluJo SINE Alu -22 290 3 3619 235 79 40 chr2 89660299 89660601 -161027253 - L1MC4 LINE L1 -1393 6649 6360 29 78 0 0 chr2 89660760 89660824 -161027030 + AT_rich Low_complexity Low_complexity 1 64 0 4527 192 32 47 chr2 89662130 89663199 -161024655 + L1MC/D LINE L1 4096 5184 -1091 246 174 0 0 chr2 89663199 89663245 -161024609 - U5 snRNA snRNA -70 46 1 4527 192 32 47 chr2 89663245 89663584 -161024270 + L1MC/D LINE L1 5184 5527 -748 395 283 40 12 chr2 89713591 89713764 -160974090 - L1ME LINE L1 -337 5784 5607 191 333 65 11 chr2 89713877 89713970 -160973884 + L2 LINE L2 3175 3272 -41 2851 9 0 12 chr2 89714030 89714350 -160973504 + AluYb8 SINE Alu 1 316 -2 1641 223 13 40 chr2 89714838 89715380 -160972474 + L1ME LINE L1 4885 5402 -764 2333 93 0 3 chr2 89715380 89715681 -160972173 - AluSc SINE Alu -9 300 1 1641 223 13 40 chr2 89715681 89715890 -160971964 + L1ME LINE L1 5402 5615 -551 2387 59 0 3 chr2 89716026 89716315 -160971539 - AluY SINE Alu -7 304 17 310 243 157 7 chr2 89716316 89716382 -160971472 + MER104 DNA Tc2 20 75 -1823 1929 83 4 0 chr2 89716382 89716624 -160971230 - AluSp SINE Alu -22 291 49 310 243 157 7 chr2 89716624 89716697 -160971157 + MER104 DNA Tc2 75 180 0 356 333 0 9 chr2 89717255 89717369 -160970485 + L2 LINE L2 3122 3234 -38 472 174 22 11 chr2 89717460 89717552 -160970302 - MIR SINE MIR -43 219 127 23 0 0 0 chr2 89719053 89719076 -160968778 + AT_rich Low_complexity Low_complexity 1 23 0 2962 142 25 32 chr2 89719082 89719640 -160968214 - L1MB1 LINE L1 0 6168 5615 198 310 99 0 chr2 89719780 89719851 -160968003 + L2 LINE L2 3221 3298 -15 276 230 23 81 chr2 89720251 89720338 -160967516 + L2 LINE L2 3217 3298 -15 386 202 24 36 chr2 89720936 89721020 -160966834 - MER5A DNA MER1_type -93 96 14 292 305 12 0 chr2 89721197 89721279 -160966575 - MER5A DNA MER1_type 0 189 107 368 278 49 68 chr2 89721391 89721454 -160966400 + MIR3 SINE MIR 5 68 -140 881 200 157 0 chr2 89721454 89721734 -160966120 - MER33 DNA MER1_type 0 324 1 368 278 49 68 chr2 89721734 89721875 -160965979 + MIR3 SINE MIR 68 205 -3 267 279 116 47 chr2 89722441 89722527 -160965327 - MIR3 SINE MIR -36 172 81 2364 68 0 0 chr2 89722570 89722864 -160964990 - AluY SINE Alu -10 301 8 495 309 119 21 chr2 89722870 89723106 -160964748 + MIR SINE MIR 2 260 -2 211 241 0 52 chr2 89723227 89723285 -160964569 - L2 LINE L2 -15 3298 3244 324 273 152 10 chr2 89723935 89724133 -160963721 + L1MC5 LINE L1 7512 7737 -224 21 36 0 0 chr2 89724240 89724268 -160963586 + AT_rich Low_complexity Low_complexity 1 28 0 2178 103 7 0 chr2 89725125 89725415 -160962439 + AluSx SINE Alu 1 292 -20 608 233 47 64 chr2 89725429 89725601 -160962253 + MER5B DNA MER1_type 10 178 0 545 233 161 0 chr2 89725612 89725769 -160962085 + MER5A DNA MER1_type 4 189 0 277 319 164 13 chr2 89725851 89726221 -160961633 - L3 LINE CR1 -118 1459 986 434 258 0 21 chr2 89727385 89727478 -160960376 + MER58A DNA MER1_type 1 91 -16 295 146 0 0 chr2 89727492 89727540 -160960314 + MER58A DNA MER1_type 177 224 0 401 319 163 0 chr2 89727917 89728174 -160959680 + HAL1 LINE L1 13 311 -2196 1791 132 82 22 chr2 89728276 89728594 -160959260 + MER1B DNA MER1_type 1 337 0 429 189 67 0 chr2 89730191 89730281 -160957573 - L1MA9 LINE L1 -38 6274 6179 1383 156 98 26 chr2 89731931 89732238 -160955616 + L1MB8 LINE L1 5561 5889 -289 3204 221 64 28 chr2 89733532 89733959 -160953895 - L1MC4 LINE L1 0 8042 7632 2019 110 16 39 chr2 89733959 89734269 -160953585 - AluSg1 SINE Alu -4 305 3 3204 221 64 28 chr2 89734269 89734821 -160953033 - L1MC4 LINE L1 -410 7632 7027 1816 114 170 175 chr2 89734845 89735607 -160952247 - LTR12 LTR ERV1 -134 2032 57 231 250 0 0 chr2 89735611 89735663 -160952191 - LTR30 LTR ERV1 -670 52 1 2578 221 68 70 chr2 89735666 89736566 -160951288 - L1MC4a LINE L1 -925 6883 5986 1929 235 81 4 chr2 89736603 89737160 -160950694 - L1MC4a LINE L1 -1894 5914 5315 1600 104 25 21 chr2 89737179 89737420 -160950434 - L1PA10 LINE L1 -15 6153 5912 302 111 0 19 chr2 89737524 89737578 -160950276 - L1 LINE L1 -1482 4664 4612 851 296 92 84 chr2 89737614 89738655 -160949199 - L1MC4a LINE L1 -870 5276 4228 1685 214 11 40 chr2 89738738 89739247 -160948607 + L1P4 LINE L1 2842 3334 -3515 8747 185 49 17 chr2 89739253 89741616 -160946238 + L1P4 LINE L1 3945 6351 -518 2598 99 6 3 chr2 89741616 89741979 -160945875 - THE1B LTR MaLR 0 364 1 8747 185 49 17 chr2 89741979 89742015 -160945839 + L1P4 LINE L1 6351 6384 -485 5316 21 0 3 chr2 89742484 89743176 -160944678 - L1P2 LINE L1 -710 5445 4757 1825 0 0 5 chr2 89743172 89743376 -160944478 + L1P1 LINE L1 5458 5660 -495 * 6001 24 0 1 chr2 89743176 89743871 -160943983 + L1PA3 LINE L1 5458 6155 0 745 296 100 16 chr2 89743904 89744354 -160943500 - HAL1b LINE L1 -808 540 53 712 197 0 0 chr2 89744774 89744896 -160942958 - AluJb SINE Alu -21 291 170 33 0 0 0 chr2 89744988 89745021 -160942833 + AT_rich Low_complexity Low_complexity 1 33 0 2294 211 74 25 chr2 89747440 89747991 -160939863 + MLT1E LTR MaLR 1 578 -15 12851 120 37 19 chr2 89748003 89748199 -160939655 + Tigger1 DNA MER2_type 3 194 -2224 203 59 0 29 chr2 89748199 89748233 -160939621 + (TTA)n Simple_repeat Simple_repeat 3 35 0 12851 120 37 19 chr2 89748233 89750063 -160937791 + Tigger1 DNA MER2_type 194 2066 -352 2333 97 0 19 chr2 89750983 89751291 -160936563 - AluY SINE Alu -9 302 1 250 289 64 72 chr2 89752058 89752426 -160935428 + L1MC3 LINE L1 18 363 -6060 2301 260 70 50 chr2 89752713 89754783 -160933071 + L1MC3 LINE L1 814 3115 -4007 3413 188 30 8 chr2 89754903 89755561 -160932293 + L1MC3 LINE L1 7113 7785 0 1364 227 6 0 chr2 89755562 89755875 -160931979 + L1MC3 LINE L1 3282 3596 -3345 908 198 27 0 chr2 89755880 89756102 -160931752 + L1MC3 LINE L1 5412 5639 -1302 2316 181 64 16 chr2 89756209 89756696 -160931158 - L1M4 LINE L1 -420 5764 5255 1557 237 42 33 chr2 89756698 89757217 -160930637 + L1MC3 LINE L1 6640 7163 -1417 2039 94 30 24 chr2 89757306 89757604 -160930250 + AluSq SINE Alu 3 302 -11 21 57 0 0 chr2 89758643 89758678 -160929176 + AT_rich Low_complexity Low_complexity 1 35 0 338 310 70 14 chr2 89758999 89759141 -160928713 + L2 LINE L2 3128 3277 -36 963 270 59 26 chr2 89759417 89759724 -160928130 + HAL1 LINE L1 605 921 -1586 330 325 93 35 chr2 89759807 89760118 -160927736 - MLT1L LTR MaLR -243 372 44 2599 225 17 32 chr2 89760198 89760595 -160927259 + L1ME1 LINE L1 5512 5897 -269 2042 134 3 0 chr2 89760595 89760885 -160926969 + AluSx SINE Alu 1 291 -21 2599 225 17 32 chr2 89760885 89761149 -160926705 + L1ME1 LINE L1 5897 6163 -3 253 121 0 52 chr2 89761159 89761217 -160926637 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 253 286 99 19 chr2 89761550 89761711 -160926143 + L1ME4a LINE L1 5931 6104 -17 424 322 100 72 chr2 89762218 89763067 -160924787 - L2 LINE L2 -562 2752 1880 416 346 86 0 chr2 89763621 89763783 -160924071 - MIR3 SINE MIR -1 207 32 1472 218 148 50 chr2 89763862 89764458 -160923396 + MLT1E1 LTR MaLR 1 654 0 1679 173 0 24 chr2 89764515 89764943 -160922911 + AluJb SINE Alu 1 421 0 373 288 65 12 chr2 89765472 89765642 -160922212 + L1ME LINE L1 5063 5241 -905 525 284 123 19 chr2 89765869 89766080 -160921774 - MIR SINE MIR -9 253 21 541 253 111 67 chr2 89766098 89766214 -160921640 + L1ME LINE L1 5404 5513 -608 2373 102 0 0 chr2 89766214 89766519 -160921335 - AluSq SINE Alu -8 305 1 541 253 111 67 chr2 89766519 89766762 -160921092 + L1ME LINE L1 5513 5779 -342 294 129 14 14 chr2 89766923 89766993 -160920861 + L1ME4a LINE L1 6049 6118 -3 15905 148 23 8 chr2 89767673 89772934 -160914920 + L1MA1 LINE L1 2373 7721 0 266 254 134 0 chr2 89774265 89774332 -160913522 - MIR SINE MIR -118 144 69 1268 211 6 76 chr2 89774341 89774578 -160913276 + L1ME2 LINE L1 5600 5852 -482 2184 118 7 0 chr2 89774578 89774875 -160912979 + AluSx SINE Alu 3 301 -11 1268 211 6 76 chr2 89774875 89775157 -160912697 + L1ME2 LINE L1 5852 6331 -3 481 276 13 32 chr2 89775175 89775331 -160912523 + MER5B DNA MER1_type 24 176 -2 233 139 47 0 chr2 89775884 89775927 -160911927 + MER5A DNA MER1_type 145 189 0 211 102 20 41 chr2 89776076 89776125 -160911729 + (GAAA)n Simple_repeat Simple_repeat 4 51 0 417 314 8 0 chr2 89776129 89776253 -160911601 - MER69 DNA AcHobo -2401 125 1 209 122 0 82 chr2 89776515 89776564 -160911290 + (GAAA)n Simple_repeat Simple_repeat 4 48 0 2212 175 33 102 chr2 89776857 89777294 -160910560 + MLT1D LTR MaLR 1 395 -110 884 9 0 19 chr2 89777294 89777402 -160910452 - L1PA2 LINE L1 0 6155 6050 2212 175 33 102 chr2 89777402 89777506 -160910348 + MLT1D LTR MaLR 395 505 0 214 303 109 50 chr2 89778457 89778576 -160909278 - MIR SINE MIR -65 143 18 273 356 38 8 chr2 89778667 89778799 -160909055 + L2 LINE L2 3137 3272 0 37683 47 2 2 chr2 89780749 89785418 -160902436 - L1P LINE L1 -1459 4687 22 867 198 21 21 chr2 89785409 89785646 -160902208 - L1M4 LINE L1 -2167 4477 4241 * 2171 228 81 9 chr2 89785642 89785887 -160901967 - L1M4 LINE L1 -3327 3317 3091 1991 172 20 42 chr2 89785887 89786289 -160901565 - MSTD LTR MaLR -3 393 1 2171 228 81 9 chr2 89786289 89786890 -160900964 - L1M4 LINE L1 -3553 3091 2415 861 194 28 45 chr2 89786889 89787136 -160900718 - L1M4 LINE L1 -5417 1125 883 * 288 263 0 0 chr2 89787157 89787214 -160900640 - L1M4 LINE L1 -6483 59 3 485 274 83 83 chr2 89787497 89787928 -160899926 - L1MEd LINE L1 -5583 536 106 596 204 36 22 chr2 89788008 89788145 -160899709 + MIR SINE MIR 48 186 -76 193 269 221 34 chr2 89788227 89788376 -160899478 + MIR SINE MIR 75 251 -11 297 0 0 0 chr2 89788585 89788618 -160899236 + (CA)n Simple_repeat Simple_repeat 1 33 0 419 327 9 0 chr2 89789028 89789141 -160898713 + MIR SINE MIR 32 145 -63 918 143 19 13 chr2 89789243 89789397 -160898457 - MER2 DNA MER2_type -190 155 1 1192 154 15 66 chr2 89789397 89789669 -160898185 + L1MB8 LINE L1 5905 6162 -16 22 35 0 0 chr2 89791040 89791069 -160896785 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 89791611 89791633 -160896221 + AT_rich Low_complexity Low_complexity 1 22 0 202 161 16 48 chr2 89791909 89791971 -160895883 + A-rich Low_complexity Low_complexity 4 63 0 2021 131 0 0 chr2 89792378 89792696 -160895158 - AluSx SINE Alu 0 320 3 300 351 101 7 chr2 89793617 89793765 -160894089 + MER5A DNA MER1_type 26 187 -2 190 394 0 10 chr2 89795125 89795224 -160892630 + L2 LINE L2 2661 2758 -556 574 231 149 0 chr2 89795838 89795972 -160891882 + MER5A DNA MER1_type 1 154 -35 398 273 175 39 chr2 89795998 89796152 -160891702 + MER5B DNA MER1_type 4 178 0 200 194 0 0 chr2 89796229 89796265 -160891589 + (TG)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr2 89796591 89796612 -160891242 + AT_rich Low_complexity Low_complexity 1 21 0 291 333 53 9 chr2 89797249 89797363 -160890491 + MIR SINE MIR 112 230 -32 708 250 127 28 chr2 89797407 89797619 -160890235 + MIR SINE MIR 3 235 -27 28 29 0 0 chr2 89800387 89800422 -160887432 + AT_rich Low_complexity Low_complexity 1 35 0 26 74 0 0 chr2 89800660 89800714 -160887140 + AT_rich Low_complexity Low_complexity 1 54 0 31 44 0 0 chr2 89801377 89801422 -160886432 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 89801506 89801528 -160886326 + AT_rich Low_complexity Low_complexity 1 22 0 222 357 24 0 chr2 89803986 89804070 -160883784 + L2 LINE L2 2326 2411 -903 2453 11 0 0 chr2 89804085 89804356 -160883498 + AluY SINE Alu 41 311 0 528 105 11 21 chr2 89804366 89804461 -160883393 + MER4A LTR ERV1 5 98 -566 1571 129 30 79 chr2 89804461 89804824 -160883030 + MER4A LTR ERV1 261 664 0 1320 290 120 18 chr2 89804824 89805645 -160882209 + L2 LINE L2 2409 3313 0 473 273 161 6 chr2 89807350 89807511 -160880343 - MER5A DNA MER1_type 0 189 4 4762 207 24 8 chr2 89811029 89812164 -160875690 + L1P LINE L1 1921 3073 -3073 829 169 56 75 chr2 89812264 89812583 -160875271 - L1 LINE L1 -1612 4534 4222 340 367 23 6 chr2 89812580 89812757 -160875097 - L1M3d LINE L1 -5503 388 209 * 694 272 77 35 chr2 89812933 89813194 -160874660 - L1M3d LINE L1 -5611 280 9 2257 95 0 16 chr2 89813249 89813554 -160874300 - AluSg SINE Alu -10 300 1 1998 163 0 0 chr2 89814032 89814338 -160873516 - AluSx SINE Alu -6 306 1 22 56 0 0 chr2 89814995 89815031 -160872823 + AT_rich Low_complexity Low_complexity 1 36 0 2916 142 6 18 chr2 89816318 89816824 -160871030 + L1PA13 LINE L1 5664 6163 0 678 213 76 51 chr2 89816928 89817125 -160870729 + MIR SINE MIR 1 202 -60 331 289 126 13 chr2 89817125 89817364 -160870490 + L1ME3A LINE L1 5680 5945 -217 3387 158 40 117 chr2 89817408 89818468 -160869386 + MER52C LTR ERV1 301 1278 0 277 234 124 36 chr2 89818468 89818605 -160869249 + L1ME3A LINE L1 5991 6139 -31 848 70 0 0 chr2 89818903 89819018 -160868836 - L1PA13 LINE L1 -1 6162 6048 823 130 80 0 chr2 89819297 89819459 -160868395 + L1MA9 LINE L1 6128 6302 -10 2255 137 40 0 chr2 89819867 89820217 -160867637 - THE1B LTR MaLR 0 364 1 646 167 9 171 chr2 89820950 89821013 -160866841 - MER5A DNA MER1_type -1 188 116 2363 74 0 13 chr2 89821013 89821322 -160866532 + AluY SINE Alu 1 305 -6 646 167 9 171 chr2 89821322 89821480 -160866374 - MER5A DNA MER1_type -73 116 3 520 218 15 30 chr2 89821724 89821857 -160865997 - MER94 DNA DNA -2 132 2 196 304 184 8 chr2 89822120 89822245 -160865609 + L2 LINE L2 2924 3070 -202 426 39 0 0 chr2 89823416 89823468 -160864386 + (TG)n Simple_repeat Simple_repeat 2 53 0 489 347 45 20 chr2 89823684 89823929 -160863925 + MIR SINE MIR 6 256 -6 1842 133 47 39 chr2 89824678 89825038 -160862816 - THE1C LTR MaLR -12 363 1 389 291 39 34 chr2 89825195 89825374 -160862480 + MLT1K LTR MaLR 373 552 -36 256 302 111 40 chr2 89825487 89825613 -160862241 - MIR SINE MIR -58 150 16 304 140 35 0 chr2 89825622 89825679 -160862175 - MER58 DNA MER1_type 0 2420 2362 1511 228 25 33 chr2 89825852 89826247 -160861607 + MLT1D LTR MaLR 1 392 -113 2127 269 72 13 chr2 89826328 89826964 -160860890 + L1MDa LINE L1 34 707 -5833 22 70 0 0 chr2 89827003 89827046 -160860808 + AT_rich Low_complexity Low_complexity 1 43 0 1810 168 3 26 chr2 89827445 89827755 -160860099 + AluJo SINE Alu 1 303 -9 241 324 55 28 chr2 89828391 89828536 -160859318 - MIR SINE MIR -6 256 108 251 328 22 60 chr2 89829113 89829247 -160858607 - MIR SINE MIR -127 135 7 2352 105 0 0 chr2 89829724 89830028 -160857826 - AluSx SINE Alu -8 304 1 261 203 72 0 chr2 89830028 89830097 -160857757 + MLT1K LTR MaLR 437 510 -78 658 194 12 62 chr2 89830103 89830263 -160857591 - MIR SINE MIR 0 262 111 271 224 0 0 chr2 89830614 89830672 -160857182 - LTR37B LTR ERV1 -361 107 50 826 233 29 124 chr2 89831358 89831908 -160855946 + LTR1B LTR ERV1 1 498 -328 272 151 19 0 chr2 89833238 89833282 -160854572 + MER41A LTR ERV1 1 45 -509 1769 71 18 192 chr2 89833282 89833662 -160854192 + LTR14B LTR ERVK 1 578 -30 40576 53 8 1 chr2 89833674 89839328 -160848526 + HERVK14 LTR ERVK 1 5763 -182 341 194 28 14 chr2 89839329 89839401 -160848453 + MER41C LTR ERV1 6 78 -476 561 30 45 226 chr2 89839401 89839534 -160848320 + HERVK14 LTR ERVK 5837 5945 0 2050 74 105 44 chr2 89839537 89839949 -160847905 + LTR14B LTR ERVK 1 608 0 3464 103 8 0 chr2 89839949 89840463 -160847391 + MER41A LTR ERV1 37 554 0 4932 135 67 13 chr2 89840549 89842283 -160845571 + MER41A-int LTR ERV1 3 2017 -3929 285 127 55 0 chr2 89842279 89842334 -160845520 + MER41A-int LTR ERV1 2167 2224 -3722 * 2412 107 12 15 chr2 89842325 89842727 -160845127 + MER41A-int LTR ERV1 3355 3755 -3782 1247 109 27 16 chr2 89842720 89842954 -160844900 + MER41A-int LTR ERV1 2199 2440 -2575 * 2072 79 0 0 chr2 89843054 89843308 -160844546 - AluY SINE Alu -57 254 1 1796 95 4 0 chr2 89843308 89843561 -160844293 + MER41A-int LTR ERV1 5691 5944 -2 4349 76 0 0 chr2 89843561 89844115 -160843739 + MER41A LTR ERV1 1 554 0 4144 78 45 2 chr2 89845977 89846552 -160841302 - MER4A LTR ERV1 0 600 1 341 258 227 26 chr2 89846834 89847028 -160840826 - MIR SINE MIR -1 261 29 5161 65 19 0 chr2 89847109 89847757 -160840097 - PABL_A LTR ERV1 0 660 1 392 206 0 14 chr2 89847883 89847956 -160839898 - L2 LINE L2 -38 3275 3204 508 230 46 20 chr2 89850174 89850326 -160837528 - MER104 DNA Tc2 -24 156 1 765 85 8 17 chr2 89851506 89851624 -160836230 + AluSg1 SINE Alu 1 117 -192 265 371 0 24 chr2 89851727 89851851 -160836003 - MIR3 SINE MIR -73 135 15 2155 113 0 7 chr2 89852011 89852303 -160835551 + AluSx SINE Alu 1 290 -22 272 350 50 33 chr2 89852892 89853012 -160834842 - L2 LINE L2 -8 3264 3143 318 324 99 9 chr2 89853598 89853709 -160834145 + L2 LINE L2 3151 3271 -1 258 32 0 0 chr2 89854420 89854451 -160833403 + (ATATG)n Simple_repeat Simple_repeat 5 35 0 225 0 0 0 chr2 89855940 89855965 -160831889 + (T)n Simple_repeat Simple_repeat 1 25 0 21 36 0 0 chr2 89856127 89856155 -160831699 + AT_rich Low_complexity Low_complexity 1 28 0 27 29 0 0 chr2 89856868 89856902 -160830952 + AT_rich Low_complexity Low_complexity 1 34 0 216 0 0 0 chr2 89857184 89857208 -160830646 + (T)n Simple_repeat Simple_repeat 1 24 0 872 230 33 9 chr2 89857285 89857498 -160830356 - MER58A DNA MER1_type 0 224 7 198 91 0 0 chr2 89857525 89857558 -160830296 + (T)n Simple_repeat Simple_repeat 1 33 0 1870 171 3 7 chr2 89857697 89857989 -160829865 + AluJb SINE Alu 1 291 -21 25 0 0 0 chr2 89858185 89858210 -160829644 + AT_rich Low_complexity Low_complexity 1 25 0 385 237 21 21 chr2 89858829 89858926 -160828928 - MER5C DNA MER1_type 0 324 228 227 316 0 0 chr2 89858998 89859055 -160828799 + polypyrimidine Low_complexity Low_complexity 4 60 0 205 289 0 0 chr2 89859064 89859109 -160828745 - MER5C DNA MER1_type -279 45 1 289 273 227 20 chr2 89859115 89859265 -160828589 + MIR3 SINE MIR 15 195 -13 2252 242 115 32 chr2 89859327 89860412 -160827442 - L2 LINE L2 0 3313 2141 6962 94 9 26 chr2 89860412 89861487 -160826367 + MER11C LTR ERVK 1 1057 -14 693 172 0 98 chr2 89861601 89861775 -160826079 + MER20 DNA MER1_type 55 211 -8 1037 245 81 23 chr2 89861777 89862087 -160825767 - L2 LINE L2 -2015 1299 972 632 309 0 11 chr2 89862746 89862934 -160824920 - MIR SINE MIR -19 243 58 28 29 0 0 chr2 89863041 89863076 -160824778 + AT_rich Low_complexity Low_complexity 1 35 0 2024 183 25 77 chr2 89864916 89865349 -160822505 - L1ME2 LINE L1 -277 5887 5488 2244 73 11 0 chr2 89865349 89865636 -160822218 - AluSp SINE Alu -23 290 1 2024 183 25 77 chr2 89865636 89865764 -160822090 - L1ME2 LINE L1 -676 5488 5355 23 0 0 0 chr2 89866524 89866547 -160821307 + AT_rich Low_complexity Low_complexity 1 23 0 2640 141 34 30 chr2 89866566 89867040 -160820814 - LTR12 LTR ERV1 -234 480 5 4794 144 26 46 chr2 89867431 89868455 -160819399 - L1MD1 LINE L1 -1 6241 5239 255 373 40 0 chr2 89868810 89868936 -160818918 - L2 LINE L2 -4 3268 3138 1004 212 18 46 chr2 89869860 89870143 -160817711 - LTR43 LTR ERV1 -137 465 191 288 335 138 46 chr2 89870393 89870653 -160817201 - L2 LINE L2 -173 3099 2816 2351 179 42 0 chr2 89871507 89871914 -160815940 - MSTB LTR MaLR 0 426 3 22 35 0 0 chr2 89872433 89872462 -160815392 + AT_rich Low_complexity Low_complexity 1 29 0 22 70 0 0 chr2 89872897 89872940 -160814914 + AT_rich Low_complexity Low_complexity 1 43 0 330 314 44 22 chr2 89873213 89873350 -160814504 + MIR SINE MIR 117 256 -6 726 192 60 50 chr2 89875327 89875509 -160812345 + MIR SINE MIR 59 242 -20 186 359 60 60 chr2 89875680 89875995 -160811859 + L2 LINE L2 2444 2758 -556 304 280 72 40 chr2 89876727 89876852 -160811002 - MIR SINE MIR -99 163 35 209 385 36 0 chr2 89877301 89877384 -160810470 - L2 LINE L2 -44 3269 3184 4458 172 140 22 chr2 89877716 89878870 -160808984 + Charlie1 DNA MER1_type 1471 2761 0 2485 59 0 0 chr2 89879052 89879342 -160808512 - AluSc SINE Alu -19 290 1 25 31 0 0 chr2 89879422 89879454 -160808400 + AT_rich Low_complexity Low_complexity 1 32 0 349 255 94 83 chr2 89879527 89879719 -160808135 - MIR3 SINE MIR -3 205 12 204 226 0 0 chr2 89880841 89880894 -160806960 + T-rich Low_complexity Low_complexity 1 53 0 2027 105 0 30 chr2 89882299 89882621 -160805233 - AluSg SINE Alu 0 313 1 185 178 22 0 chr2 89882855 89882900 -160804954 + (CAT)n Simple_repeat Simple_repeat 2 47 0 267 293 93 0 chr2 89883275 89883415 -160804439 - L2 LINE L2 -222 3050 2898 1480 181 115 9 chr2 89883919 89884257 -160803597 - MLT1A2 LTR MaLR 0 374 1 268 198 12 37 chr2 89884706 89884787 -160803067 - L1MC5 LINE L1 -51 7910 7832 2119 231 88 29 chr2 89884868 89885586 -160802268 - L1ME2 LINE L1 -10 6088 5414 724 160 56 0 chr2 89885586 89885711 -160802143 - FLAM_C SINE Alu -1 132 1 2119 231 88 29 chr2 89885711 89886396 -160801458 - L1ME2 LINE L1 -684 5414 4465 298 211 102 48 chr2 89886417 89886583 -160801271 - L1ME2 LINE L1 -1808 4272 4098 635 199 76 0 chr2 89886710 89886841 -160801013 - FLAM_C SINE Alu -2 141 1 1387 236 48 32 chr2 89886856 89887356 -160800498 - L1ME2 LINE L1 -2196 3884 3377 439 199 51 77 chr2 89887405 89887620 -160800234 - L1ME2 LINE L1 -5856 214 2 811 243 73 50 chr2 89888486 89888803 -160799051 - MER21B LTR ERV1 -125 738 415 701 249 159 30 chr2 89889474 89889808 -160798046 - LTR33 LTR ERVL -121 400 24 189 159 0 0 chr2 89890363 89890407 -160797447 + T-rich Low_complexity Low_complexity 10 53 0 1160 91 0 23 chr2 89890422 89890598 -160797256 - L1PA11 LINE L1 -2 6172 6001 190 364 0 0 chr2 89892559 89892614 -160795240 + L2 LINE L2 3168 3222 -50 400 209 22 0 chr2 89892894 89892985 -160794869 + MER69 DNA AcHobo 4 96 -2430 366 170 189 0 chr2 89893026 89893056 -160794798 - L1MA9 LINE L1 -115 6197 6174 275 49 24 0 chr2 89893056 89893097 -160794757 + (TG)n Simple_repeat Simple_repeat 1 42 0 366 170 189 0 chr2 89893097 89893172 -160794682 - L1MA9 LINE L1 -138 6174 6072 5047 166 40 75 chr2 89893175 89893891 -160793963 - L1 LINE L1 -743 5403 4664 2165 146 0 0 chr2 89893891 89894192 -160793662 - AluJb SINE Alu -11 301 1 5047 166 40 75 chr2 89894192 89894436 -160793418 - L1 LINE L1 -1482 4664 4413 811 178 0 0 chr2 89894436 89894565 -160793289 - FLAM_C SINE Alu -3 130 2 5047 166 40 75 chr2 89894565 89895010 -160792844 - L1 LINE L1 -1733 4413 4046 1972 141 118 18 chr2 89895242 89895631 -160792223 + MSTA LTR MaLR 1 428 0 362 343 62 7 chr2 89895642 89895788 -160792066 + L2 LINE L2 3118 3271 -1 382 291 114 0 chr2 89896182 89896340 -160791514 + MER5B DNA MER1_type 3 178 0 634 300 52 9 chr2 89896751 89896961 -160790893 + MIR SINE MIR 32 250 -12 856 145 112 17 chr2 89897171 89897350 -160790504 - MER30 DNA MER1_type -33 197 2 380 235 224 0 chr2 89897637 89897735 -160790119 + MER5B DNA MER1_type 1 120 -58 334 312 138 14 chr2 89899295 89899586 -160788268 - L3 LINE CR1 -28 1549 1153 355 249 24 115 chr2 89900066 89900231 -160787623 + L2 LINE L2 3164 3313 0 1589 214 224 6 chr2 89900287 89900774 -160787080 - MLT1E LTR MaLR 0 593 1 476 254 29 35 chr2 89901295 89901468 -160786386 - MER104 DNA Tc2 -1 179 8 418 342 136 0 chr2 89901590 89901745 -160786109 - L3 LINE CR1 -2 1575 1400 24408 84 10 1 chr2 89902726 89904596 -160783258 - L1PA7 LINE L1 -3 6466 4615 2260 82 16 13 chr2 89904596 89904902 -160782952 - AluY SINE Alu -4 307 1 24408 84 10 1 chr2 89904902 89907442 -160780412 - L1PA7 LINE L1 -1854 4615 2018 926 139 0 0 chr2 89907443 89907587 -160780267 - L1PA7 LINE L1 -6313 148 5 384 344 177 36 chr2 89908343 89908727 -160779127 + L2 LINE L2 2833 3270 -2 251 344 61 46 chr2 89908838 89908969 -160778885 + L2 LINE L2 3139 3271 -1 823 204 31 42 chr2 89909506 89909697 -160778157 + MER5A DNA MER1_type 1 189 0 573 288 19 74 chr2 89909774 89910031 -160777823 + MIR SINE MIR 8 250 -12 1851 174 0 16 chr2 89910039 89910344 -160777510 - AluJo SINE Alu -11 301 2 22 0 0 0 chr2 89910707 89910729 -160777125 + AT_rich Low_complexity Low_complexity 1 22 0 630 236 75 0 chr2 89911474 89911635 -160776219 - MER5B DNA MER1_type -4 174 2 3869 175 59 43 chr2 89912942 89913534 -160774320 + MER21B LTR ERV1 1 582 -281 2202 124 54 25 chr2 89913534 89913888 -160773966 - THE1B LTR MaLR 0 364 1 3869 175 59 43 chr2 89913888 89914046 -160773808 + MER21B LTR ERV1 582 768 -95 186 43 0 0 chr2 89914046 89914069 -160773785 + (CTTG)n Simple_repeat Simple_repeat 1 23 0 3869 175 59 43 chr2 89914069 89914167 -160773687 + MER21B LTR ERV1 768 863 0 695 163 8 8 chr2 89914238 89914361 -160773493 - LTR35 LTR ERV1 -8 610 488 344 207 58 21 chr2 89914461 89914599 -160773255 - LTR43 LTR ERV1 -186 493 198 549 95 0 24 chr2 89914723 89914807 -160773047 - LTR35 LTR ERV1 -536 82 1 2032 213 74 24 chr2 89914808 89915362 -160772492 - L1ME1 LINE L1 -130 6036 5455 265 270 0 0 chr2 89915363 89915426 -160772428 + MER52A LTR ERV1 3 65 -1690 3893 182 29 22 chr2 89915427 89916783 -160771071 + MER52A LTR ERV1 217 1755 0 773 166 58 10 chr2 89916783 89917042 -160770812 - L1ME1 LINE L1 -716 5462 5194 503 157 0 0 chr2 89917205 89917294 -160770560 - MLT1C LTR MaLR -378 89 1 320 286 66 0 chr2 89917782 89917873 -160769981 + MLT1L LTR MaLR 1 97 -518 473 307 24 0 chr2 89918270 89918397 -160769457 + MIR SINE MIR 17 146 -116 484 237 39 19 chr2 89918574 89918730 -160769124 - MIR SINE MIR 0 262 104 11646 127 19 14 chr2 89919955 89921959 -160765895 + L1PA11 LINE L1 3339 5352 -794 3230 102 26 26 chr2 89921979 89922481 -160765373 + L1PA11 LINE L1 5673 6174 0 413 250 136 9 chr2 89922482 89922710 -160765144 - L2 LINE L2 -759 2555 2299 23 68 0 0 chr2 89923740 89923784 -160764070 + AT_rich Low_complexity Low_complexity 1 44 0 5406 166 15 10 chr2 89923997 89926022 -160761832 - L1PA16 LINE L1 -13 6153 4122 2117 170 19 3 chr2 89926293 89926652 -160761202 + MLT1A1 LTR MaLR 1 365 0 21 36 0 0 chr2 89926902 89926930 -160760924 + AT_rich Low_complexity Low_complexity 1 28 0 1535 178 63 21 chr2 89926981 89927150 -160760704 - AluJo SINE Alu -14 298 111 180 0 0 0 chr2 89927150 89927170 -160760684 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1535 178 63 21 chr2 89927170 89927286 -160760568 - AluJo SINE Alu -201 111 1 1244 199 116 22 chr2 89927288 89927555 -160760299 - AluJo SINE Alu -16 296 5 200 370 0 12 chr2 89927880 89927961 -160759893 + MIR3 SINE MIR 10 89 -119 2143 95 56 0 chr2 89928016 89928301 -160759553 + AluSc SINE Alu 1 301 -8 24 32 0 0 chr2 89928964 89928995 -160758859 + AT_rich Low_complexity Low_complexity 1 31 0 385 196 89 98 chr2 89929297 89929409 -160758445 - MER5B DNA MER1_type 0 178 68 1480 201 44 0 chr2 89929421 89929695 -160758159 - AluJo SINE Alu -26 286 1 259 237 211 0 chr2 89929775 89929851 -160758003 - MER5B DNA MER1_type -22 156 65 1862 146 24 89 chr2 89930818 89931235 -160756619 - MLT1B LTR MaLR 0 390 1 1537 201 116 5 chr2 89932412 89932826 -160755028 - L1M4 LINE L1 -1688 4458 3999 981 262 99 12 chr2 89932905 89933229 -160754625 + HAL1 LINE L1 411 762 -1745 526 233 27 13 chr2 89933232 89933382 -160754472 + HAL1 LINE L1 1484 1635 -872 18801 28 85 0 chr2 89933382 89936332 -160751522 + L1PA2 LINE L1 3135 6155 0 1075 238 172 29 chr2 89936422 89936980 -160750874 + HAL1 LINE L1 1624 2261 -246 191 111 0 28 chr2 89937075 89937111 -160750743 + (TGGGGG)n Simple_repeat Simple_repeat 3 37 0 198 71 0 0 chr2 89937139 89937167 -160750687 + (CA)n Simple_repeat Simple_repeat 2 29 0 5683 106 42 20 chr2 89937201 89938443 -160749411 - L1PA13 LINE L1 -3 7598 6335 10398 183 36 20 chr2 89938545 89939771 -160748083 - L1PA13 LINE L1 -1233 6351 5146 750 153 0 44 chr2 89939771 89939908 -160747946 - FLAM_C SINE Alu -2 131 1 10398 183 36 20 chr2 89939908 89941112 -160746742 - L1PA13 LINE L1 -2438 5146 3882 4795 153 46 9 chr2 89941121 89942545 -160745309 - L1PB2 LINE L1 -2 6149 4675 3810 247 24 10 chr2 89942544 89943703 -160744151 - L1PA13 LINE L1 -3685 3899 2731 * 1929 153 3 0 chr2 89943703 89943991 -160743863 - AluSx SINE Alu -23 289 1 3810 247 24 10 chr2 89943991 89944256 -160743598 - L1PA13 LINE L1 -4853 2731 2471 5768 237 62 7 chr2 89944328 89945816 -160742038 - L1PA13 LINE L1 -5936 1645 75 * 18391 108 11 59 chr2 89945813 89952131 -160735723 - L1PA7 LINE L1 -3 6151 12 499 215 0 0 chr2 89952151 89952244 -160735610 - L1PA13 LINE L1 -7488 93 1 267 310 30 0 chr2 89952635 89952735 -160735119 + CT-rich Low_complexity Low_complexity 4 106 0 594 300 62 22 chr2 89953343 89953663 -160734191 - MER90 LTR ERV1 0 614 282 250 275 22 11 chr2 89953760 89953851 -160734003 + L1MC4 LINE L1 6911 7002 -1040 3001 93 5 0 chr2 89954538 89954958 -160732896 - L1PA13 LINE L1 -19 6144 5723 391 342 97 0 chr2 89956834 89956989 -160730865 + MIR SINE MIR 1 170 -92 491 259 93 8 chr2 89957015 89957333 -160730521 + MLT1I LTR MaLR 17 409 0 23912 143 12 18 chr2 89957355 89961078 -160726776 + L1PA8A LINE L1 1 3803 -2643 2608 86 20 3 chr2 89961078 89961427 -160726427 - THE1A LTR MaLR 0 355 1 23912 143 12 18 chr2 89961427 89964056 -160723798 + L1PA8A LINE L1 3803 6445 -1 269 316 0 0 chr2 89964056 89964113 -160723741 - L2 LINE L2 -80 3192 3136 280 236 0 0 chr2 89964270 89964325 -160723529 - MER5A DNA MER1_type -1 188 134 945 102 54 0 chr2 89964342 89964508 -160723346 - L1MA7 LINE L1 -3 6288 6114 2670 158 24 6 chr2 89964508 89965130 -160722724 - L1MA7 LINE L1 -743 5403 4837 3809 130 81 15 chr2 89965130 89965876 -160721978 + L1MA8 LINE L1 5477 6279 -12 612 183 135 8 chr2 89965897 89966023 -160721831 - MER5A DNA MER1_type -47 142 1 210 156 0 0 chr2 89966259 89966304 -160721550 + T-rich Low_complexity Low_complexity 1 45 0 2060 32 4 0 chr2 89966305 89966553 -160721301 - L1PA4 LINE L1 -3 6152 5904 349 333 139 0 chr2 89967102 89967267 -160720587 - MIR SINE MIR -65 197 10 464 274 84 50 chr2 89967887 89968208 -160719646 - HAL1 LINE L1 -2133 374 43 14769 146 26 48 chr2 89968258 89969120 -160718734 - L1MA2 LINE L1 -6 7717 6837 2100 125 7 17 chr2 89969120 89969417 -160718437 - AluSq SINE Alu -19 294 1 14769 146 26 48 chr2 89969417 89971055 -160716799 - L1MA2 LINE L1 -886 6837 5164 1336 90 0 16 chr2 89971055 89971244 -160716610 - L1PB1 LINE L1 0 6151 5966 14769 146 26 48 chr2 89971244 89974019 -160713835 - L1MA2 LINE L1 -2559 5164 2328 527 175 10 0 chr2 89974019 89974116 -160713738 - THE1C LTR MaLR 0 375 278 14769 146 26 48 chr2 89974116 89974140 -160713714 - L1MA2 LINE L1 -5395 2328 2305 276 146 0 0 chr2 89974140 89974188 -160713666 - MSTA LTR MaLR -376 52 5 14769 146 26 48 chr2 89974188 89974981 -160712873 - L1MA2 LINE L1 -5418 2305 1638 493 186 8 24 chr2 89975035 89975159 -160712695 - L1MA2 LINE L1 -7432 133 12 832 139 28 7 chr2 89976296 89976440 -160711414 - L1M1 LINE L1 -5716 1849 1703 182 374 77 0 chr2 89976696 89976787 -160711067 + L2 LINE L2 3004 3101 -171 349 277 71 76 chr2 89977377 89977561 -160710293 - MIR3 SINE MIR -16 192 10 425 337 56 6 chr2 89978256 89978434 -160709420 - MIR SINE MIR -56 206 20 2557 69 0 0 chr2 89979597 89979901 -160707953 + AluY SINE Alu 1 304 -7 2109 276 118 55 chr2 89979938 89981918 -160705936 - HAL1 LINE L1 -400 2107 2 389 206 165 0 chr2 89982085 89982182 -160705672 - L2 LINE L2 -1 3312 3200 505 335 0 0 chr2 89982511 89982669 -160705185 - MIR3 SINE MIR -6 202 45 376 305 85 28 chr2 89983336 89983513 -160704341 - MIR SINE MIR -7 255 69 1423 161 15 43 chr2 89983876 89984023 -160703831 + MER33 DNA MER1_type 3 153 -2432 1784 147 7 18 chr2 89984023 89984308 -160703546 - AluJo SINE Alu -30 282 1 1423 161 15 43 chr2 89984308 89984489 -160703365 + MER33 DNA MER1_type 153 322 -2 209 213 0 0 chr2 89985539 89985586 -160702268 + T-rich Low_complexity Low_complexity 1 47 0 711 12 0 0 chr2 89985589 89985675 -160702179 - L1PA3 LINE L1 0 6155 6070 1193 40 0 0 chr2 89985675 89985824 -160702030 + L1P1 LINE L1 5575 5723 -432 200 189 0 0 chr2 89985824 89985861 -160701993 - MIR SINE MIR -108 154 118 798 151 0 0 chr2 89985877 89986016 -160701838 + L1MA7 LINE L1 6149 6287 -4 2294 92 0 16 chr2 89986576 89986881 -160700973 + AluSq SINE Alu 1 300 -13 2075 117 0 10 chr2 89986945 89987236 -160700618 + AluSg1 SINE Alu 1 288 -21 266 318 88 7 chr2 89987458 89987606 -160700248 - MIR3 SINE MIR -1 207 48 251 319 0 71 chr2 89988468 89988609 -160699245 + MIR SINE MIR 76 206 -56 565 293 80 36 chr2 89990207 89990456 -160697398 - MIR SINE MIR -2 260 1 562 217 16 8 chr2 89990475 89990550 -160697304 + MER5A DNA MER1_type 2 80 -109 2054 157 0 6 chr2 89990550 89990862 -160696992 + AluSx SINE Alu 1 310 -2 562 217 16 8 chr2 89990862 89990915 -160696939 + MER5A DNA MER1_type 80 131 -58 243 61 0 0 chr2 89990915 89990948 -160696906 + (TG)n Simple_repeat Simple_repeat 2 34 0 663 176 29 29 chr2 89990950 89991086 -160696768 - AluJo SINE Alu -176 136 1 313 81 65 48 chr2 89991087 89991149 -160696705 + MER5A DNA MER1_type 127 189 0 523 210 190 31 chr2 89992953 89993148 -160694706 - MER57A LTR ERV1 -63 340 115 290 198 148 0 chr2 89993171 89993252 -160694602 - LTR54 LTR ERV1 -411 99 7 852 147 8 0 chr2 89993252 89993381 -160694473 - FLAM_C SINE Alu 0 133 4 267 277 179 0 chr2 89993386 89993498 -160694356 + L2 LINE L2 3178 3309 -4 202 150 50 0 chr2 89993919 89993959 -160693895 - MER5B DNA MER1_type -1 177 136 533 222 14 69 chr2 89994103 89994247 -160693607 - MER5B DNA MER1_type 0 178 43 188 254 118 55 chr2 89994347 89994457 -160693397 + L2 LINE L2 3136 3252 -20 607 263 69 11 chr2 89994463 89994638 -160693216 + MIR SINE MIR 68 252 -10 656 308 34 22 chr2 89995431 89995752 -160692102 + LTR16C LTR ERVL 68 392 -99 1198 220 63 40 chr2 89995878 89996324 -160691530 - MLT1C LTR MaLR -6 461 6 257 311 100 0 chr2 89996610 89996700 -160691154 + MIR SINE MIR 20 118 -90 3436 117 67 33 chr2 89997536 89997851 -160690003 - LTR43 LTR ERV1 0 602 256 6083 145 26 35 chr2 89997851 89998932 -160688922 + MER11C LTR ERVK 1 1071 0 3436 117 67 33 chr2 89998932 89999198 -160688656 - LTR43 LTR ERV1 -346 256 1 2495 227 48 35 chr2 89999198 89999859 -160687995 - MER21B LTR ERV1 -51 812 143 382 214 10 102 chr2 90000016 90000114 -160687740 - MER21B LTR ERV1 -774 89 1 184 323 73 42 chr2 90000115 90000211 -160687643 - MIR SINE MIR -108 154 56 565 184 10 10 chr2 90001331 90001434 -160686420 - MER21B LTR ERV1 -209 654 552 332 269 50 17 chr2 90001626 90001745 -160686109 + LTR67 LTR ERVL 430 552 -5 195 333 0 0 chr2 90001992 90002049 -160685805 + L2 LINE L2 3000 3056 -216 470 240 88 18 chr2 90002274 90002527 -160685327 + MLT1H LTR MaLR 267 549 0 2164 173 21 11 chr2 90002683 90003064 -160684790 - MLT1B LTR MaLR 0 390 6 185 268 49 49 chr2 90004286 90004368 -160683486 - L2 LINE L2 0 3313 3232 204 253 147 11 chr2 90005085 90005180 -160682674 + MIR SINE MIR 149 256 -6 554 239 139 25 chr2 90005657 90005858 -160681996 - MIR SINE MIR -16 246 23 1043 275 95 30 chr2 90005915 90006753 -160681101 + L1ME3A LINE L1 4980 5871 -299 811 219 18 0 chr2 90006913 90007082 -160680772 + FRAM SINE Alu 1 172 -4 241 333 13 0 chr2 90007656 90007731 -160680123 + MIR3 SINE MIR 112 187 -21 229 271 200 0 chr2 90008183 90008253 -160679601 - MER117 DNA MER1_type -113 84 1 815 259 95 9 chr2 90008610 90008842 -160679012 - MIR SINE MIR -10 252 1 239 280 271 0 chr2 90008998 90009105 -160678749 - HsTC2c DNA Tc2 -6 723 588 1410 72 6 0 chr2 90009116 90009297 -160678557 - AluY SINE Alu -15 296 115 1031 244 21 4 chr2 90009335 90009577 -160678277 - HsTC2c DNA Tc2 -250 479 234 460 295 26 32 chr2 90009708 90009898 -160677956 - HsTC2c DNA Tc2 -540 189 1 210 71 0 0 chr2 90010911 90010939 -160676915 + (T)n Simple_repeat Simple_repeat 1 28 0 948 278 71 3 chr2 90010971 90011266 -160676588 + LTR16C LTR ERVL 177 491 0 237 320 8 49 chr2 90011403 90011525 -160676329 - MIR SINE MIR -61 147 31 494 349 125 12 chr2 90014861 90015339 -160672515 + L2 LINE L2 2564 3095 -177 554 281 48 48 chr2 90015423 90015718 -160672136 - LTR16A1 LTR ERVL -16 441 147 245 273 61 0 chr2 90015893 90015959 -160671895 + L2 LINE L2 3203 3272 0 2180 125 3 0 chr2 90016001 90016313 -160671541 - AluSq SINE Alu 0 313 1 945 296 101 43 chr2 90016573 90017176 -160670678 - L2 LINE L2 0 3313 2703 437 341 162 33 chr2 90017162 90017245 -160670609 + L2 LINE L2 2247 2318 -996 * 3639 205 6 12 chr2 90017245 90017898 -160669956 - MER82 DNA MER2_type -3 650 2 437 341 162 33 chr2 90017898 90018272 -160669582 + L2 LINE L2 2318 2763 -551 452 235 92 0 chr2 90018579 90018698 -160669156 - MLT1H LTR MaLR 0 549 420 648 269 45 22 chr2 90018724 90018947 -160668907 - MLT1H LTR MaLR -207 342 115 2199 163 31 82 chr2 90019273 90019722 -160668132 - MSTB LTR MaLR 0 426 1 2075 105 0 4 chr2 90019915 90020192 -160667662 + AluSq SINE Alu 34 309 -4 2531 63 0 0 chr2 90021401 90021701 -160666153 - AluY SINE Alu -11 300 1 223 325 126 30 chr2 90021941 90022243 -160665611 + L2 LINE L2 2811 3141 -131 195 256 0 0 chr2 90022340 90022383 -160665471 + L2 LINE L2 3224 3266 -6 414 296 116 11 chr2 90022542 90022731 -160665123 + MIR SINE MIR 47 255 -7 2484 156 115 65 chr2 90023528 90024023 -160663831 + MLT2B1 LTR ERVL 1 520 0 268 324 0 0 chr2 90027247 90027318 -160660536 + MIR3 SINE MIR 113 183 -25 306 307 130 30 chr2 90027318 90027618 -160660236 + L3 LINE CR1 395 724 -853 306 0 0 0 chr2 90027781 90027815 -160660039 + (T)n Simple_repeat Simple_repeat 1 34 0 279 0 0 0 chr2 90027879 90027910 -160659944 + (CA)n Simple_repeat Simple_repeat 2 32 0 215 371 137 23 chr2 90028012 90028268 -160659586 + L3 LINE CR1 942 1226 -351 237 288 27 54 chr2 90030213 90030324 -160657530 + L3 LINE CR1 652 759 -818 192 256 0 0 chr2 90031452 90031495 -160656359 - L2 LINE L2 0 3272 3230 774 274 27 57 chr2 90031511 90031564 -160656290 - MIR SINE MIR 0 262 209 1865 174 0 0 chr2 90031564 90031863 -160655991 - AluJb SINE Alu -13 299 1 774 274 27 57 chr2 90031863 90032072 -160655782 - MIR SINE MIR -53 209 8 449 267 89 0 chr2 90034350 90034496 -160653358 + MIR SINE MIR 56 214 -48 876 139 139 101 chr2 90034930 90035139 -160652715 - MER20 DNA MER1_type -1 218 2 53 40 0 0 chr2 90035143 90035217 -160652637 + AT_rich Low_complexity Low_complexity 1 74 0 2867 98 50 0 chr2 90035257 90035677 -160652177 - L1MA5A LINE L1 -3 6294 5854 234 0 0 0 chr2 90035714 90035740 -160652114 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 43021 58 3 0 chr2 90035740 90041857 -160645997 - L1PA5 LINE L1 -8 6146 11 3955 127 10 14 chr2 90041866 90042643 -160645211 - L1MA5A LINE L1 -429 5868 5096 1867 48 9 4 chr2 90042754 90042984 -160644870 - AluY SINE Alu -18 293 63 210 278 45 98 chr2 90043042 90043175 -160644679 + MIR SINE MIR 28 153 -109 247 268 14 0 chr2 90045372 90045443 -160642411 + MIR SINE MIR 177 248 -14 21 36 0 0 chr2 90045449 90045477 -160642377 + AT_rich Low_complexity Low_complexity 1 28 0 394 169 0 28 chr2 90046518 90046589 -160641265 - L2 LINE L2 0 3272 3204 1329 159 78 19 chr2 90047295 90047566 -160640288 + L1MA4 LINE L1 5978 6264 -36 6569 177 16 3 chr2 90047674 90049856 -160637998 + L1PA15 LINE L1 3929 6160 -5 1174 227 8 4 chr2 90050493 90050753 -160637101 - MLT1A1 LTR MaLR 0 365 105 192 40 0 0 chr2 90050795 90050820 -160637034 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 614 269 116 21 chr2 90050954 90051481 -160636373 + L1ME4a LINE L1 5510 6086 -35 526 266 11 0 chr2 90052225 90052402 -160635452 + CT-rich Low_complexity Low_complexity 1 179 0 * 784 101 17 45 chr2 90052369 90052548 -160635306 + (TTTC)n Simple_repeat Simple_repeat 1 174 0 183 227 45 0 chr2 90052600 90052644 -160635210 - L2 LINE L2 -17 3296 3251 361 242 113 24 chr2 90052913 90053037 -160634817 - MER5A DNA MER1_type -48 141 7 1053 168 51 104 chr2 90053722 90054340 -160633514 - MER4C LTR ERV1 0 465 1 2233 104 0 0 chr2 90055649 90055929 -160631925 + AluSx SINE Alu 1 280 -32 539 145 0 0 chr2 90055930 90056038 -160631816 + AluY SINE Alu 208 315 0 502 126 46 0 chr2 90057612 90057699 -160630155 + MLT2B2 LTR ERVL 1 91 -424 1235 207 79 12 chr2 90057880 90058247 -160629607 + MLT2B2 LTR ERVL 94 520 0 730 98 24 8 chr2 90058364 90058487 -160629367 - L1PA5 LINE L1 -1 6153 6029 368 302 116 0 chr2 90058894 90059023 -160628831 + MIR SINE MIR 109 252 -10 184 231 0 0 chr2 90059898 90059937 -160627917 + MIR SINE MIR 49 87 -175 2084 137 3 13 chr2 90061662 90061975 -160625879 - AluSx SINE Alu -2 310 1 447 293 43 18 chr2 90062076 90062240 -160625614 - L3 LINE CR1 -1 1576 1409 263 355 123 18 chr2 90062284 90062512 -160625342 - L3 LINE CR1 -311 1266 1015 211 220 51 161 chr2 90062558 90062676 -160625178 - L3 LINE CR1 -687 890 786 2413 80 3 0 chr2 90063078 90063379 -160624475 + AluSq SINE Alu 1 302 -11 482 261 120 62 chr2 90064024 90064381 -160623473 + MLT1J2 LTR MaLR 73 450 0 937 266 50 80 chr2 90065818 90066334 -160621520 - MLT1J LTR MaLR -3 508 8 355 318 45 30 chr2 90066595 90066796 -160621058 + MIR SINE MIR 7 210 -52 2344 108 0 0 chr2 90069365 90069671 -160618183 + AluSx SINE Alu 1 306 -6 269 342 84 32 chr2 90070867 90071022 -160616832 + MER5A DNA MER1_type 21 183 -6 214 171 29 0 chr2 90071842 90071912 -160615942 + (TA)n Simple_repeat Simple_repeat 2 73 0 333 221 21 42 chr2 90071916 90072011 -160615843 + L1MC4 LINE L1 6611 6703 -1339 26 0 0 0 chr2 90073300 90073326 -160614528 + AT_rich Low_complexity Low_complexity 1 26 0 41908 41 1 4 chr2 90073326 90079498 -160608356 - L1PA3 LINE L1 0 6155 1 23 0 0 0 chr2 90079567 90079590 -160608264 + AT_rich Low_complexity Low_complexity 1 23 0 297 0 0 0 chr2 90080087 90080120 -160607734 + (TG)n Simple_repeat Simple_repeat 2 34 0 25 65 0 0 chr2 90080400 90080446 -160607408 + AT_rich Low_complexity Low_complexity 1 46 0 2755 237 94 47 chr2 90080636 90082051 -160605803 + L1M4b LINE L1 492 2223 -4915 1538 186 16 46 chr2 90082051 90082357 -160605497 + AluJo SINE Alu 5 301 -11 2755 237 94 47 chr2 90082357 90082845 -160605009 + L1M4b LINE L1 2223 2687 -4451 2593 86 131 2 chr2 90082900 90083297 -160604557 + LTR7 LTR ERV1 1 448 -2 822 260 61 22 chr2 90083344 90084031 -160603823 + L1MEc LINE L1 1775 2445 -3770 2423 88 0 0 chr2 90084092 90084386 -160603468 + AluSx SINE Alu 1 294 -18 1039 183 31 125 chr2 90084423 90084806 -160603048 + MLT1A1 LTR MaLR 19 365 0 387 176 13 115 chr2 90084806 90084928 -160602926 + L1MEc LINE L1 2674 2785 -3430 190 300 0 0 chr2 90086208 90086248 -160601606 + L2 LINE L2 3141 3180 -92 279 360 0 0 chr2 90086589 90086714 -160601140 - MER117 DNA MER1_type -72 125 1 1900 159 8 19 chr2 90087085 90087449 -160600405 + MER47A DNA MER2_type 2 361 -5 228 331 182 0 chr2 90087716 90087837 -160600017 - MIR SINE MIR -56 206 64 1034 174 97 0 chr2 90088755 90088951 -160598903 - AluJo SINE Alu -97 215 1 320 167 320 13 chr2 90089699 90089849 -160598005 + LTR33 LTR ERVL 312 507 -14 324 313 50 88 chr2 90090838 90091100 -160596754 + L2 LINE L2 2985 3236 -36 409 266 88 31 chr2 90091715 90091907 -160595947 + L2 LINE L2 1575 1777 -1537 303 217 17 0 chr2 90093128 90093188 -160594666 + L2 LINE L2 3247 3307 -6 213 321 129 21 chr2 90093217 90093357 -160594497 + MIR SINE MIR 18 172 -90 539 200 152 0 chr2 90093455 90093580 -160594274 - MIR SINE MIR -20 242 99 207 350 136 0 chr2 90093803 90093906 -160593948 - L2 LINE L2 -2 3270 3154 1813 115 65 4 chr2 90093979 90094239 -160593615 + AluSx SINE Alu 1 276 -36 2001 152 54 35 chr2 90094297 90094837 -160593017 - MLT2A2 LTR ERVL 0 554 1 353 102 17 0 chr2 90094886 90094945 -160592909 + (TG)n Simple_repeat Simple_repeat 1 60 0 720 295 14 9 chr2 90095035 90095404 -160592450 - MLT1I LTR MaLR 0 409 8 1534 143 0 30 chr2 90095675 90095860 -160591994 + AluSx SINE Alu 1 179 -133 2252 107 0 3 chr2 90095860 90096159 -160591695 + AluSx SINE Alu 1 298 -14 1534 143 0 30 chr2 90096159 90096210 -160591644 + AluSx SINE Alu 179 230 -82 375 281 54 38 chr2 90096436 90096621 -160591233 + MER20B DNA MER1_type 1 188 -595 382 343 96 11 chr2 90099534 90099712 -160588142 - MIR SINE MIR -6 256 64 271 156 22 0 chr2 90101561 90101606 -160586248 - L2 LINE L2 -4 3268 3223 1644 211 19 8 chr2 90101780 90102141 -160585713 + MLT1A1 LTR MaLR 1 365 0 213 39 0 0 chr2 90103173 90103199 -160584655 + (GA)n Simple_repeat Simple_repeat 1 26 0 5124 115 4 5 chr2 90103693 90104500 -160583354 + L1PA15 LINE L1 5353 6158 -7 1711 244 89 22 chr2 90105015 90105568 -160582286 + MLT1E LTR MaLR 4 593 0 433 124 59 0 chr2 90105699 90106036 -160581818 + (TA)n Simple_repeat Simple_repeat 1 356 0 245 395 0 16 chr2 90107382 90107506 -160580348 + MIR SINE MIR 21 142 -120 265 290 110 0 chr2 90107557 90107657 -160580197 - L2 LINE L2 0 3313 3203 254 250 78 0 chr2 90108506 90108570 -160579284 - L3 LINE CR1 -17 1560 1492 2007 216 2 22 chr2 90108681 90109098 -160578756 - MER70A LTR ERVL 0 472 64 957 337 78 40 chr2 90109555 90110234 -160577620 + L2 LINE L2 1560 2291 -1023 345 24 0 0 chr2 90110234 90110276 -160577578 + (TG)n Simple_repeat Simple_repeat 2 43 0 957 337 78 40 chr2 90110276 90110609 -160577245 + L2 LINE L2 2291 2610 -704 206 292 15 0 chr2 90110629 90110694 -160577160 + MIR SINE MIR 186 251 -11 195 398 146 4 chr2 90110708 90110947 -160576907 + L2 LINE L2 2622 2894 -420 296 316 84 7 chr2 90111101 90111256 -160576598 + MIR SINE MIR 93 259 -3 1192 175 80 7 chr2 90111429 90111715 -160576139 + L1MC2 LINE L1 6029 6335 -9 215 184 0 0 chr2 90111771 90111809 -160576045 - MIR SINE MIR -92 116 79 188 302 0 0 chr2 90112638 90112691 -160575163 - L2 LINE L2 -15 3298 3246 513 267 18 45 chr2 90113332 90113553 -160574301 + LTR33 LTR ERVL 1 215 -306 255 191 0 0 chr2 90113616 90113658 -160574196 + LTR33 LTR ERVL 327 368 -153 225 0 0 0 chr2 90113666 90113691 -160574163 + (A)n Simple_repeat Simple_repeat 1 25 0 375 177 0 25 chr2 90113717 90113796 -160574058 + LTR33 LTR ERVL 436 512 -9 219 196 0 0 chr2 90114200 90114246 -160573608 + MIR SINE MIR 104 149 -113 2307 113 0 0 chr2 90114579 90114888 -160572966 - AluSx SINE Alu -3 309 1 237 261 22 22 chr2 90115468 90115560 -160572294 - L1ME LINE L1 -552 5569 5478 246 126 0 5 chr2 90116286 90116333 -160571521 + MIR SINE MIR 99 143 -65 2498 119 19 3 chr2 90117762 90118131 -160569723 + THE1C LTR MaLR 1 375 0 26 30 0 0 chr2 90118463 90118496 -160569358 + AT_rich Low_complexity Low_complexity 1 33 0 668 339 146 30 chr2 90118646 90118731 -160569123 - L3 LINE CR1 -420 1157 1083 1025 235 128 7 chr2 90118731 90119037 -160568817 - MER2 DNA MER2_type 0 344 2 668 339 146 30 chr2 90119037 90119382 -160568472 - L3 LINE CR1 -494 1083 677 543 311 84 4 chr2 90119537 90119762 -160568092 - MIR SINE MIR -3 259 17 2025 225 43 26 chr2 90120957 90121579 -160566275 - MLT1E2 LTR MaLR 0 626 2 183 369 63 9 chr2 90123557 90123668 -160564186 + L2 LINE L2 3140 3256 -16 402 234 99 58 chr2 90124485 90124656 -160563198 - MER5B DNA MER1_type 0 178 1 431 215 21 0 chr2 90126144 90126237 -160561617 - MIR SINE MIR -66 196 102 529 111 0 0 chr2 90126666 90126747 -160561107 - L1P LINE L1 -879 5267 5187 226 303 98 25 chr2 90127156 90127278 -160560576 + MIR SINE MIR 54 184 -78 622 265 26 0 chr2 90127290 90127441 -160560413 - MIR SINE MIR -1 261 107 521 303 11 29 chr2 90127508 90127683 -160560171 - MER5B DNA MER1_type -6 172 1 716 233 17 33 chr2 90127983 90128026 -160559828 - MER97a DNA MER1_type? -715 179 137 2324 104 55 6 chr2 90128026 90128373 -160559481 + THE1B LTR MaLR 1 364 0 716 233 17 33 chr2 90128373 90128509 -160559345 - MER97a DNA MER1_type? -757 137 3 21 95 0 0 chr2 90128656 90128719 -160559135 + AT_rich Low_complexity Low_complexity 1 63 0 293 227 103 10 chr2 90128733 90128830 -160559024 - MIR SINE MIR -83 179 74 405 286 102 78 chr2 90128839 90129084 -160558770 - MIR SINE MIR -10 252 2 336 233 41 0 chr2 90129621 90129694 -160558160 + MIR SINE MIR 75 150 -112 1402 216 73 22 chr2 90129899 90130270 -160557584 + MLT1B LTR MaLR 1 390 0 1780 146 24 0 chr2 90131120 90131374 -160556480 - AluSx SINE Alu -52 260 1 683 293 87 41 chr2 90131481 90131894 -160555960 + MLT1J2 LTR MaLR 1 432 -18 36 91 0 0 chr2 90132229 90132328 -160555526 + AT_rich Low_complexity Low_complexity 1 99 0 303 287 43 11 chr2 90133038 90133132 -160554722 - L2 LINE L2 -4 3309 3213 333 308 104 29 chr2 90133159 90133236 -160554618 + MIR SINE MIR 5 75 -187 2142 125 54 17 chr2 90133236 90133587 -160554267 - THE1B LTR MaLR 0 364 1 11960 95 0 1 chr2 90133588 90135168 -160552686 - THE1B-int LTR MaLR -1 1579 1 2072 134 50 36 chr2 90135168 90135527 -160552327 - THE1B LTR MaLR 0 364 1 333 308 104 29 chr2 90135527 90135686 -160552168 + MIR SINE MIR 74 262 0 217 426 7 7 chr2 90136270 90136406 -160551448 - L2 LINE L2 -219 3053 2918 1124 182 84 94 chr2 90136518 90136815 -160551039 - AluJo SINE Alu -7 295 2 290 329 7 77 chr2 90136868 90137011 -160550843 + MIR3 SINE MIR 73 205 -3 1093 189 77 6 chr2 90138471 90138783 -160549071 - L1MA10 LINE L1 0 6334 6001 366 305 86 20 chr2 90138869 90139020 -160548834 - MIR SINE MIR -50 212 52 348 337 157 49 chr2 90139944 90140250 -160547604 - L2 LINE L2 0 3272 2934 21 0 0 0 chr2 90140267 90140288 -160547566 + AT_rich Low_complexity Low_complexity 1 21 0 296 322 126 47 chr2 90140389 90140793 -160547061 - L2 LINE L2 -549 2765 2330 540 304 31 108 chr2 90140893 90141274 -160546580 + L2 LINE L2 2913 3264 -8 587 257 51 0 chr2 90143099 90143274 -160544580 - Charlie8 DNA MER1_type -2210 207 24 394 298 26 46 chr2 90143566 90143717 -160544137 + MIR3 SINE MIR 30 177 -31 1234 324 85 13 chr2 90144505 90145234 -160542620 + L2 LINE L2 2522 3308 -5 22 35 0 0 chr2 90145255 90145284 -160542570 + AT_rich Low_complexity Low_complexity 1 29 0 6481 208 39 34 chr2 90145517 90146885 -160540969 + L1MB8 LINE L1 3494 4854 -1324 1994 188 34 11 chr2 90146885 90147321 -160540533 - L1MB1 LINE L1 -5 6163 5718 6481 208 39 34 chr2 90147321 90148001 -160539853 + L1MB8 LINE L1 4854 5548 -630 2472 134 56 10 chr2 90148001 90148410 -160539444 - MSTA LTR MaLR 0 428 1 6481 208 39 34 chr2 90148410 90149045 -160538809 + L1MB8 LINE L1 5548 6178 0 204 319 32 76 chr2 90149067 90149224 -160538630 - MIR SINE MIR -42 220 71 183 156 0 0 chr2 90149805 90149837 -160538017 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 326 292 117 7 chr2 90150140 90150277 -160537577 - L2 LINE L2 -4 3309 3158 201 74 0 0 chr2 90150419 90150446 -160537408 + (ATG)n Simple_repeat Simple_repeat 1 27 0 335 205 26 0 chr2 90151592 90151670 -160536184 + MLT1C LTR MaLR 71 150 -317 243 353 135 0 chr2 90151950 90152083 -160535771 + L2 LINE L2 3122 3272 0 249 211 133 0 chr2 90153179 90153269 -160534585 - LTR33 LTR ERVL -6 515 414 961 174 64 138 chr2 90153302 90153693 -160534161 + MLT1A1 LTR MaLR 4 365 0 1040 236 30 4 chr2 90153693 90153956 -160533898 + MLT1A1-int LTR MaLR 1 270 -1465 759 247 0 11 chr2 90153964 90154142 -160533712 - MER5B DNA MER1_type -1 177 2 308 337 86 18 chr2 90155071 90155245 -160532609 - MIR3 SINE MIR -61 147 14 219 239 28 28 chr2 90155898 90155969 -160531885 + CT-rich Low_complexity Low_complexity 3 73 0 273 229 0 14 chr2 90156667 90156737 -160531117 - L1M4 LINE L1 -1526 4620 4552 367 276 49 8 chr2 90156824 90156947 -160530907 + MIR SINE MIR 120 247 -15 1227 194 123 6 chr2 90156986 90157311 -160530543 - MLT1A1 LTR MaLR 0 365 3 21 0 0 0 chr2 90157360 90157381 -160530473 + AT_rich Low_complexity Low_complexity 1 21 0 585 355 104 31 chr2 90158062 90158529 -160529325 + L2 LINE L2 2472 3027 -286 4361 150 70 45 chr2 90158529 90159115 -160528739 - MER49 LTR ERV1 0 923 306 1657 94 0 9 chr2 90159115 90159328 -160528526 - AluSc SINE Alu -1 308 98 4361 150 70 45 chr2 90159328 90159642 -160528212 - MER49 LTR ERV1 -617 306 1 585 355 104 31 chr2 90159642 90159950 -160527904 + L2 LINE L2 3027 3311 -2 180 0 0 0 chr2 90160325 90160345 -160527509 + (TG)n Simple_repeat Simple_repeat 2 21 0 331 159 16 0 chr2 90161022 90161085 -160526769 - MER92B LTR ERV1 -22 614 551 842 222 53 5 chr2 90161249 90161456 -160526398 - MER92B LTR ERV1 -289 347 131 1025 240 74 0 chr2 90161598 90161840 -160526014 + Tigger7 DNA MER2_type 8 267 -2220 570 162 0 10 chr2 90161841 90161852 -160526002 + Tigger7 DNA MER2_type 2490 2500 -87 1042 198 111 9 chr2 90161852 90162069 -160525785 - MER8 DNA MER2_type 0 239 1 570 162 0 10 chr2 90162069 90162156 -160525698 + Tigger7 DNA MER2_type 2500 2587 0 239 214 128 8 chr2 90162286 90162403 -160525451 - L1MC5 LINE L1 -298 7663 7533 30 45 0 0 chr2 90162424 90162468 -160525386 + AT_rich Low_complexity Low_complexity 1 44 0 3648 141 49 7 chr2 90162485 90163277 -160524577 - L1MA6 LINE L1 -311 5989 5159 522 205 9 0 chr2 90163277 90163389 -160524465 + L1MA6 LINE L1 5042 5154 -992 540 169 20 74 chr2 90163389 90163537 -160524317 - MER92B LTR ERV1 -496 140 1 1097 320 99 35 chr2 90163537 90164371 -160523483 + L2 LINE L2 1819 2706 -608 692 189 0 0 chr2 90164430 90164557 -160523297 - MER20 DNA MER1_type -4 215 89 21 0 0 0 chr2 90164559 90164580 -160523274 + AT_rich Low_complexity Low_complexity 1 21 0 201 143 0 0 chr2 90166555 90166590 -160521264 + (CA)n Simple_repeat Simple_repeat 2 36 0 242 330 36 27 chr2 90167536 90167648 -160520206 + MER5B DNA MER1_type 3 115 -63 1168 106 12 6 chr2 90168081 90168351 -160519503 - AluSp SINE Alu 0 398 128 2004 131 7 3 chr2 90168353 90168651 -160519203 - AluSx SINE Alu -13 299 1 27 87 0 0 chr2 90169340 90169409 -160518445 + AT_rich Low_complexity Low_complexity 1 69 0 1859 121 7 47 chr2 90169415 90169712 -160518142 + AluSx SINE Alu 1 285 -27 222 37 0 0 chr2 90169712 90169739 -160518115 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 342 263 42 0 chr2 90169896 90169991 -160517863 + L1ME LINE L1 5563 5661 -460 483 272 106 23 chr2 90171708 90171925 -160515929 - MIR SINE MIR -10 252 18 687 331 107 6 chr2 90171966 90172322 -160515532 + MLT1I LTR MaLR 9 400 -9 2228 93 10 3 chr2 90172384 90172684 -160515170 - AluY SINE Alu -1 310 9 310 254 40 56 chr2 90173051 90173177 -160514677 + MER5A DNA MER1_type 21 144 -45 2148 98 0 21 chr2 90173279 90173632 -160514222 + AluY SINE Alu 3 349 0 4979 73 163 1 chr2 90174639 90175350 -160512504 - LTR12 LTR ERV1 0 826 1 235 217 11 11 chr2 90175800 90175892 -160511962 + (TA)n Simple_repeat Simple_repeat 2 93 0 1967 109 0 70 chr2 90177202 90177533 -160510321 - AluSg SINE Alu -2 308 1 183 205 0 0 chr2 90177545 90177584 -160510270 + T-rich Low_complexity Low_complexity 1 39 0 306 322 129 83 chr2 90177587 90177851 -160510003 + L2 LINE L2 2992 3267 -5 23 0 0 0 chr2 90177928 90177951 -160509903 + AT_rich Low_complexity Low_complexity 1 23 0 1042 256 101 19 chr2 90177952 90178487 -160509367 - HAL1b LINE L1 0 1348 770 2417 82 7 0 chr2 90178625 90178928 -160508926 - AluSp SINE Alu -8 305 1 254 331 135 0 chr2 90179325 90179473 -160508381 + MIR SINE MIR 84 251 -11 942 79 0 31 chr2 90180741 90180868 -160506986 - AluJb SINE Alu -189 123 1 241 291 182 30 chr2 90181213 90181378 -160506476 + MIR SINE MIR 37 226 -36 420 315 27 49 chr2 90183373 90183557 -160504297 + MER5A DNA MER1_type 8 187 -2 255 290 19 28 chr2 90183559 90183666 -160504188 + L2 LINE L2 2407 2512 -802 281 282 14 0 chr2 90184527 90184598 -160503256 - L2 LINE L2 -11 3302 3231 23 33 0 0 chr2 90184643 90184673 -160503181 + AT_rich Low_complexity Low_complexity 1 30 0 325 247 108 48 chr2 90184785 90184951 -160502903 - MLT1J1 LTR MaLR -11 435 260 322 232 40 40 chr2 90184961 90185086 -160502768 - MLT1J2 LTR MaLR -246 204 80 56 76 0 0 chr2 90185635 90185754 -160502100 + AT_rich Low_complexity Low_complexity 1 119 0 25 0 0 0 chr2 90186264 90186289 -160501565 + AT_rich Low_complexity Low_complexity 1 25 0 5956 128 4 2 chr2 90186471 90187812 -160500042 + L1PA15 LINE L1 4815 6164 -1 1243 251 12 9 chr2 90187813 90188159 -160499695 + L1MB8 LINE L1 5769 6115 -63 631 79 11 11 chr2 90188596 90188685 -160499169 - AluS SINE Alu -223 89 1 337 297 77 31 chr2 90188936 90189158 -160498696 - L1M4 LINE L1 -1680 4466 4235 334 323 62 54 chr2 90189140 90189400 -160498454 - L1M4 LINE L1 -2456 3690 3429 * 1624 197 22 62 chr2 90189515 90189966 -160497888 - L1MC2 LINE L1 -25 6319 5887 904 289 74 35 chr2 90189980 90190941 -160496913 - L1M4 LINE L1 -2875 3271 2268 2418 87 0 0 chr2 90190941 90191250 -160496604 - AluY SINE Alu -2 309 1 904 289 74 35 chr2 90191250 90191287 -160496567 - L1M4 LINE L1 -3878 2268 2234 197 32 0 32 chr2 90191318 90191349 -160496505 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 1706 120 10 3 chr2 90191349 90191641 -160496213 - L1PA4 LINE L1 -24 6131 5838 407 306 0 16 chr2 90191686 90191913 -160495941 + C-rich Low_complexity Low_complexity 1 223 0 581 297 142 9 chr2 90192062 90192274 -160495580 - MIR SINE MIR -18 244 5 330 138 0 0 chr2 90195594 90195652 -160492202 + (T)n Simple_repeat Simple_repeat 1 58 0 347 337 20 0 chr2 90196681 90196782 -160491072 + MIR SINE MIR 48 150 -112 499 242 98 13 chr2 90196842 90196995 -160490859 + MIR SINE MIR 20 185 -77 186 254 17 34 chr2 90197590 90197649 -160490205 - MIR SINE MIR -199 63 6 364 324 9 0 chr2 90197686 90197794 -160490060 + MIR3 SINE MIR 66 174 -34 267 316 123 57 chr2 90198159 90198403 -160489451 + MIR SINE MIR 1 260 -2 557 198 10 83 chr2 90198938 90199130 -160488724 - MER58B DNA MER1_type 0 341 164 290 363 33 33 chr2 90200162 90200374 -160487480 + MIR SINE MIR 1 212 -50 569 337 71 3 chr2 90201520 90201814 -160486040 + L2 LINE L2 2190 2503 -811 853 305 220 18 chr2 90201824 90202823 -160485031 - L2 LINE L2 -5 3308 2104 266 275 0 109 chr2 90202829 90202967 -160484887 + L2 LINE L2 2502 2624 -690 943 208 145 4 chr2 90202984 90203225 -160484629 - MLT1D LTR MaLR -51 454 180 318 346 114 34 chr2 90203247 90203571 -160484283 + L2 LINE L2 2616 2965 -349 918 196 36 4 chr2 90204162 90204387 -160483467 + Charlie4 DNA MER1_type 41 272 -1689 5983 182 8 31 chr2 90204387 90205537 -160482317 + L1M1 LINE L1 22 1144 -6421 785 274 121 49 chr2 90206006 90206437 -160481417 - MLT1J LTR MaLR -2 509 48 183 258 48 0 chr2 90207172 90207234 -160480620 + MIR3 SINE MIR 105 169 -39 880 281 30 7 chr2 90208707 90209002 -160478852 + MLT1I LTR MaLR 94 395 -14 1914 156 0 16 chr2 90209469 90209777 -160478077 - AluJb SINE Alu -1 311 9 22 0 0 0 chr2 90212053 90212075 -160475779 + AT_rich Low_complexity Low_complexity 1 22 0 360 0 0 0 chr2 90212142 90212182 -160475672 + (CA)n Simple_repeat Simple_repeat 1 40 0 1053 94 12 6 chr2 90212520 90212632 -160475222 + (TTTC)n Simple_repeat Simple_repeat 1 283 0 1053 94 12 6 chr2 90212632 90212802 -160475052 + (TTTC)n Simple_repeat Simple_repeat 1 171 0 5015 148 109 65 chr2 90212929 90213898 -160473956 - Ricksha_b DNA DNA -1607 1247 214 1567 101 38 0 chr2 90213898 90214136 -160473718 - L1PA16 LINE L1 -9 6157 5911 5015 148 109 65 chr2 90214136 90214360 -160473494 - Ricksha_b DNA DNA -2640 214 1 200 231 9 28 chr2 90214362 90214470 -160473384 + CT-rich Low_complexity Low_complexity 3 108 0 611 195 8 0 chr2 90215149 90215267 -160472587 - Tigger1 DNA MER2_type 0 2418 2300 766 128 0 0 chr2 90215303 90215428 -160472426 + Tigger1 DNA MER2_type 390 514 -1904 * 4729 133 50 1 chr2 90215424 90216249 -160471605 - Tigger1 DNA MER2_type -130 2288 1424 6382 150 18 5 chr2 90216279 90217400 -160470454 - Tigger1 DNA MER2_type -1282 1136 1 2219 118 3 0 chr2 90218116 90218413 -160469441 - AluSx SINE Alu -14 298 1 427 319 29 33 chr2 90218936 90219177 -160468677 - MIR SINE MIR -3 259 20 4225 192 28 24 chr2 90220797 90221015 -160466839 + MER54A LTR ERVL 17 233 -668 1992 127 10 29 chr2 90221015 90221323 -160466531 - AluSq SINE Alu -11 302 1 4225 192 28 24 chr2 90221323 90221983 -160465871 + MER54A LTR ERVL 233 899 -2 401 276 83 39 chr2 90222228 90222409 -160465445 + LTR16C LTR ERVL 210 398 -93 258 213 102 16 chr2 90222428 90222555 -160465299 - LTR37A LTR ERV1 0 426 289 466 201 90 8 chr2 90222563 90222697 -160465157 - MER53 DNA DNA -44 145 1 446 197 110 69 chr2 90222763 90222981 -160464873 - LTR37A LTR ERV1 -174 252 26 399 73 0 0 chr2 90223011 90223066 -160464788 + (TG)n Simple_repeat Simple_repeat 2 56 0 27 0 0 0 chr2 90223115 90223142 -160464712 + AT_rich Low_complexity Low_complexity 1 27 0 247 159 23 0 chr2 90223148 90223192 -160464662 + LTR16C LTR ERVL 445 489 -2 361 309 174 31 chr2 90223643 90223999 -160463855 - L2 LINE L2 -939 2375 1969 721 271 5 48 chr2 90224452 90224662 -160463192 - MIR SINE MIR -33 229 29 718 154 43 49 chr2 90224663 90224825 -160463029 + MER58B DNA MER1_type 181 341 0 264 182 15 61 chr2 90225501 90225567 -160462287 - L2 LINE L2 -3 3269 3207 * 567 251 84 63 chr2 90225542 90225781 -160462073 - L2 LINE L2 -2863 451 208 589 294 37 28 chr2 90225928 90226146 -160461708 + L2 LINE L2 3093 3312 -1 27 49 0 0 chr2 90228166 90228207 -160459647 + AT_rich Low_complexity Low_complexity 1 41 0 351 284 18 39 chr2 90228216 90228476 -160459378 + L1ME3A LINE L1 5701 5856 -314 24 67 0 0 chr2 90228642 90228687 -160459167 + AT_rich Low_complexity Low_complexity 1 45 0 999 316 22 3 chr2 90229548 90229909 -160457945 - L1PA12 LINE L1 -6000 1581 1214 5261 125 32 7 chr2 90229930 90230835 -160457019 + L1PA15 LINE L1 5238 6164 -1 294 29 0 0 chr2 90232844 90232879 -160454975 + (TG)n Simple_repeat Simple_repeat 2 36 0 294 29 0 0 chr2 90234432 90234467 -160453387 + (TG)n Simple_repeat Simple_repeat 2 36 0 747 246 112 22 chr2 90237492 90237769 -160450085 - MLT1C LTR MaLR 0 467 166 1833 229 31 10 chr2 90237790 90238374 -160449480 - L1MCb LINE L1 -2982 3582 2987 3163 236 93 66 chr2 90238384 90238497 -160449357 - L1MCb LINE L1 -3686 2878 2770 2044 123 3 3 chr2 90238497 90238814 -160449040 + AluSx SINE Alu 1 317 0 3163 236 93 66 chr2 90238814 90238926 -160448928 - L1MCb LINE L1 -3794 2770 2662 1668 177 0 39 chr2 90238926 90239237 -160448617 - AluJb SINE Alu -13 299 1 3163 236 93 66 chr2 90239237 90240970 -160446884 - L1MCb LINE L1 -3902 2662 695 2159 129 0 0 chr2 90240970 90241280 -160446574 - AluSx SINE Alu -2 310 1 3163 236 93 66 chr2 90241280 90241993 -160445861 - L1MCb LINE L1 -5869 695 3 218 279 66 0 chr2 90242022 90242083 -160445771 + MIR3 SINE MIR 123 187 -21 344 331 48 0 chr2 90242194 90242318 -160445536 + MIR3 SINE MIR 31 160 -48 2204 111 7 0 chr2 90242388 90242685 -160445169 + AluSg SINE Alu 1 299 -11 239 137 0 20 chr2 90243091 90243142 -160444712 + (TTC)n Simple_repeat Simple_repeat 1 50 0 1195 284 21 6 chr2 90243612 90243943 -160443911 - LTR16C LTR ERVL 0 491 156 256 302 9 38 chr2 90244062 90244168 -160443686 - L2 LINE L2 -1283 2031 1929 184 211 53 18 chr2 90245469 90245526 -160442328 + MIR SINE MIR 88 146 -116 364 227 9 9 chr2 90248724 90248834 -160439020 + (TA)n Simple_repeat Simple_repeat 2 111 0 231 202 36 0 chr2 90249011 90249095 -160438759 + (TA)n Simple_repeat Simple_repeat 1 87 0 271 267 22 0 chr2 90249095 90249185 -160438669 + L1MC4 LINE L1 6614 6705 -1337 246 327 73 36 chr2 90249489 90249599 -160438255 + MIR3 SINE MIR 1 114 -94 775 276 125 22 chr2 90249690 90249962 -160437892 + LTR16A LTR ERVL 105 404 -53 1924 184 36 67 chr2 90250331 90250857 -160436997 + LTR53 LTR ERVL 10 519 0 266 309 55 24 chr2 90251491 90251656 -160436198 + MLT1I LTR MaLR 67 236 -173 397 269 104 28 chr2 90251812 90252024 -160435830 - Charlie8 DNA MER1_type -2166 251 24 197 356 27 0 chr2 90252051 90252124 -160435730 + MIR3 SINE MIR 132 206 -2 696 281 134 9 chr2 90256603 90256820 -160431034 - MIR SINE MIR -14 248 5 36526 38 1 9 chr2 90257766 90262905 -160424949 - L1P2 LINE L1 -397 5757 663 241 253 24 0 chr2 90262954 90263037 -160424817 + L1MDa LINE L1 2514 2598 -3942 5088 70 3 0 chr2 90263072 90263760 -160424094 + L1P LINE L1 4 693 -5453 58 38 0 0 chr2 90263774 90263853 -160424001 + AT_rich Low_complexity Low_complexity 1 79 0 198 376 16 24 chr2 90264569 90264694 -160423160 - MIR SINE MIR -119 143 20 200 303 46 46 chr2 90265585 90265694 -160422160 + MER5B DNA MER1_type 70 178 0 248 242 15 0 chr2 90266386 90266452 -160421402 + MLT1L LTR MaLR 160 226 -389 1437 153 69 0 chr2 90266723 90267083 -160420771 - L1MC1 LINE L1 -20 6313 5894 589 177 30 116 chr2 90267083 90267379 -160420475 + LTR8 LTR ERV1 1 251 -476 349 222 33 0 chr2 90267472 90267562 -160420292 - L1MC1 LINE L1 -429 5904 5812 23 33 0 0 chr2 90267576 90267606 -160420248 + AT_rich Low_complexity Low_complexity 1 30 0 259 351 21 11 chr2 90267658 90267752 -160420102 + MIR SINE MIR 23 117 -91 224 403 35 28 chr2 90268450 90268594 -160419260 - MIR SINE MIR -108 154 10 378 0 0 0 chr2 90268919 90268961 -160418893 + (T)n Simple_repeat Simple_repeat 1 42 0 2039 173 116 16 chr2 90269138 90269294 -160418560 - L1MA8 LINE L1 -3 6288 6149 1918 167 9 9 chr2 90269294 90269635 -160418219 + MER2 DNA MER2_type 3 343 -1 2039 173 116 16 chr2 90269635 90269986 -160417868 - L1MA8 LINE L1 -142 6149 5730 321 26 0 0 chr2 90270940 90270978 -160416876 + (T)n Simple_repeat Simple_repeat 1 38 0 4113 166 63 36 chr2 90271155 90271311 -160416543 - L1MA8 LINE L1 -3 6288 6138 1918 167 9 9 chr2 90271311 90271652 -160416202 + MER2 DNA MER2_type 3 343 -1 4113 166 63 36 chr2 90271652 90272996 -160414858 - L1MA8 LINE L1 -153 6138 4742 2815 196 25 35 chr2 90272995 90274114 -160413740 - L1MB5 LINE L1 -211 6461 5351 * 3066 269 49 24 chr2 90274118 90275571 -160412283 - L1MB5 LINE L1 -2904 3740 2325 1827 133 162 6 chr2 90275571 90275886 -160411968 + THE1B LTR MaLR 1 364 0 11286 109 5 3 chr2 90275886 90277463 -160410391 + THE1B-int LTR MaLR 1 1580 0 2049 124 56 31 chr2 90277463 90277818 -160410036 + THE1B LTR MaLR 1 364 0 3066 269 49 24 chr2 90277818 90279093 -160408761 - L1MB5 LINE L1 -4318 2326 830 512 219 19 9 chr2 90279105 90279319 -160408535 + GA-rich Low_complexity Low_complexity 1 216 0 947 278 82 65 chr2 90279357 90280122 -160407732 - L1MB5 LINE L1 -5747 795 18 3076 202 54 81 chr2 90280622 90281716 -160406138 - HERVL74 LTR ERVL -1480 2098 1019 1024 261 47 85 chr2 90282846 90283255 -160404599 - MER77 LTR ERV1 -7 598 346 1279 153 128 73 chr2 90283255 90283438 -160404416 - AluJo SINE Alu -5 307 101 339 85 0 0 chr2 90283438 90283485 -160404369 + (TG)n Simple_repeat Simple_repeat 2 48 0 1279 153 128 73 chr2 90283485 90283589 -160404265 - AluJo SINE Alu -211 101 4 1024 261 47 85 chr2 90283589 90283837 -160404017 - MER77 LTR ERV1 -259 346 90 1562 238 149 10 chr2 90283900 90284409 -160403445 - MLT1E2 LTR MaLR -46 580 1 311 374 0 9 chr2 90284733 90284848 -160403006 - MIR SINE MIR -62 146 33 23 92 0 0 chr2 90285102 90285167 -160402687 + AT_rich Low_complexity Low_complexity 1 65 0 2259 119 0 0 chr2 90285491 90285801 -160402053 - AluSg SINE Alu 0 310 1 435 256 41 41 chr2 90286576 90286748 -160401106 - L2 LINE L2 -6 3307 3136 354 288 106 0 chr2 90286841 90287001 -160400853 + MLT1J LTR MaLR 1 177 -334 354 231 259 27 chr2 90288625 90288772 -160399082 + MER5A DNA MER1_type 9 189 0 427 175 19 29 chr2 90289636 90289739 -160398115 - L1PA11 LINE L1 -7 6167 6066 612 281 57 44 chr2 90291002 90291415 -160396439 - MER77 LTR ERV1 -8 597 304 277 308 102 28 chr2 90291604 90291745 -160396109 + MER5B DNA MER1_type 1 161 -28 260 89 0 22 chr2 90291877 90291922 -160395932 + (TTTTC)n Simple_repeat Simple_repeat 2 45 0 852 231 12 0 chr2 90292024 90292193 -160395661 - MER5B DNA MER1_type -6 172 2 564 306 6 12 chr2 90292211 90292381 -160395473 - MER5B DNA MER1_type -6 172 4 1989 235 78 51 chr2 90293067 90294186 -160393668 - L1M4 LINE L1 -2982 3662 2508 2109 96 28 7 chr2 90294186 90294477 -160393377 + AluSx SINE Alu 1 297 -15 1067 138 0 0 chr2 90294477 90294656 -160393198 + AluSq SINE Alu 134 312 0 2979 206 14 13 chr2 90294692 90295380 -160392474 - L1MB7 LINE L1 -20 6164 5476 2874 203 36 30 chr2 90295374 90296095 -160391759 - L1M4 LINE L1 -5188 1354 630 * 4090 204 41 24 chr2 90296173 90297792 -160390062 - L1MC1 LINE L1 -127 6486 4845 2303 233 20 16 chr2 90297879 90298623 -160389231 - L1MC1 LINE L1 -2866 3560 2814 2245 83 3 20 chr2 90298623 90298925 -160388929 - AluY SINE Alu -14 297 1 2727 129 27 37 chr2 90298962 90299473 -160388381 - L1MA5A LINE L1 -10 6287 5782 1325 156 33 4 chr2 90299482 90299725 -160388129 - L1PA16 LINE L1 -7 6159 5910 3203 135 12 8 chr2 90299735 90300454 -160387400 - L1MA5A LINE L1 -514 5783 5061 5500 179 27 54 chr2 90300613 90301720 -160386134 - L1MC1 LINE L1 -4897 1529 472 2046 9 0 0 chr2 90301720 90301942 -160385912 - AluYb8 SINE Alu -13 305 84 5500 179 27 54 chr2 90301942 90302402 -160385452 - L1MC1 LINE L1 -5954 472 1 1312 259 67 90 chr2 90302385 90302983 -160384871 - L1M4 LINE L1 -5939 603 20 * 4914 235 111 29 chr2 90302992 90303504 -160384350 - L1MDa LINE L1 -4137 2403 1935 252 0 0 0 chr2 90303504 90303532 -160384322 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4914 235 111 29 chr2 90303532 90304080 -160383774 - L1MDa LINE L1 -4605 1935 1433 2169 68 0 0 chr2 90304080 90304346 -160383508 - AluY SINE Alu -15 296 31 4914 235 111 29 chr2 90304346 90304574 -160383280 - L1MDa LINE L1 -5107 1433 1225 5176 65 17 0 chr2 90304574 90305238 -160382616 + L1PA7 LINE L1 5480 6154 0 4914 235 111 29 chr2 90305238 90305626 -160382228 - L1MDa LINE L1 -5315 1225 587 309 250 167 45 chr2 90306942 90307098 -160380756 + L2 LINE L2 3112 3286 -27 244 372 21 26 chr2 90307208 90307399 -160380455 - L2 LINE L2 -916 2398 2209 278 309 145 0 chr2 90307841 90307993 -160379861 - LTR68 LTR ERV1 -560 180 7 281 311 92 36 chr2 90308053 90308249 -160379605 + L3 LINE CR1 1213 1419 -158 417 381 7 0 chr2 90309313 90309460 -160378394 - MIR3 SINE MIR -3 205 58 504 295 44 35 chr2 90309606 90309948 -160377906 + L1ME4a LINE L1 5579 5923 -198 * 2411 195 48 31 chr2 90309653 90310197 -160377657 + L1MB7 LINE L1 5623 6175 -9 419 80 160 0 chr2 90310288 90310363 -160377491 + L1MA6 LINE L1 6208 6294 -6 300 350 94 22 chr2 90310975 90311198 -160376656 + MIR SINE MIR 6 244 -18 258 172 11 46 chr2 90311885 90311972 -160375882 + GA-rich Low_complexity Low_complexity 3 86 0 368 333 58 7 chr2 90312472 90312610 -160375244 - MIR SINE MIR -108 154 10 276 289 86 59 chr2 90315744 90315896 -160371958 + L3 LINE CR1 1216 1371 -206 652 278 80 63 chr2 90317175 90317589 -160370265 + L1MB5 LINE L1 347 767 -5775 268 313 8 15 chr2 90317591 90317722 -160370132 + L1MB5 LINE L1 833 962 -5580 4041 211 47 32 chr2 90317723 90318272 -160369582 + L1MB5 LINE L1 4500 5039 -1633 1804 154 19 22 chr2 90318272 90318583 -160369271 - AluSx SINE Alu 0 312 3 4041 211 47 32 chr2 90318583 90320164 -160367690 + L1MB5 LINE L1 5039 6660 -12 1683 266 36 22 chr2 90320333 90321077 -160366777 + L1ME3A LINE L1 1356 2146 -4679 2145 269 75 42 chr2 90321128 90323085 -160364769 + L1ME3A LINE L1 2331 4322 -2322 1319 256 135 24 chr2 90323094 90323685 -160364169 + L1ME3A LINE L1 6005 6661 -7 385 83 0 0 chr2 90324816 90324864 -160362990 - MLT1B LTR MaLR 0 390 343 43439 43 3 1 chr2 90324869 90331011 -160356843 - L1PA4 LINE L1 0 6155 7 2177 104 3 3 chr2 90331026 90331313 -160356541 - AluSg SINE Alu -23 287 1 2142 125 48 6 chr2 90331314 90331651 -160356203 - MLT1B LTR MaLR -39 351 1 444 199 76 30 chr2 90332465 90332596 -160355258 + MIR SINE MIR 25 161 -101 1388 66 0 0 chr2 90332688 90332869 -160354985 - L1PA8 LINE L1 0 6172 5992 185 320 10 70 chr2 90333265 90333359 -160354495 + MIR SINE MIR 58 145 -63 332 233 22 56 chr2 90333359 90333449 -160354405 - MER5A DNA MER1_type -2 187 101 561 204 41 118 chr2 90333461 90333579 -160354275 - L1ME3 LINE L1 0 6162 6067 1152 195 189 10 chr2 90333579 90333886 -160353968 + MER47A DNA MER2_type 2 363 -3 561 204 41 118 chr2 90333886 90333988 -160353866 - L1ME3 LINE L1 -95 6067 5959 749 291 124 15 chr2 90334242 90334572 -160353282 - L3 LINE CR1 0 1577 1212 736 256 11 6 chr2 90334778 90334954 -160352900 + MER45A DNA AcHobo 1 177 -1 406 269 39 10 chr2 90335121 90335225 -160352629 - MIR SINE MIR -66 142 36 295 284 19 135 chr2 90336197 90336620 -160351234 + L2 LINE L2 2392 2765 -549 * 310 274 74 78 chr2 90336591 90336821 -160351033 + L2 LINE L2 3084 3312 -1 3709 283 81 29 chr2 90338890 90339696 -160348158 + L1M4b LINE L1 3 766 -6193 1927 206 7 46 chr2 90339696 90340127 -160347727 + MLT2D LTR ERVL 1 414 0 3709 283 81 29 chr2 90340127 90341357 -160346497 + L1M4b LINE L1 766 2144 -4815 3092 27 8 0 chr2 90341358 90341730 -160346124 + L1PA2 LINE L1 5781 6155 0 36 23 0 0 chr2 90341730 90341773 -160346081 + AT_rich Low_complexity Low_complexity 1 43 0 396 204 19 29 chr2 90341784 90341887 -160345967 + L1M4b LINE L1 2290 2391 -4747 1448 257 95 24 chr2 90341890 90342341 -160345513 + MLT2B1 LTR ERVL 3 485 -35 1964 260 31 8 chr2 90342349 90342868 -160344986 + MER82 DNA MER2_type 122 652 -1 1020 220 114 5 chr2 90342868 90343245 -160344609 + L1M4b LINE L1 2940 3357 -3600 5147 41 13 5 chr2 90343367 90344002 -160343852 - L1PA6 LINE L1 0 6154 5515 3089 243 41 13 chr2 90344071 90345056 -160342798 + L1M4b LINE L1 3403 4414 -2543 2024 140 22 38 chr2 90345052 90345532 -160342322 + L1MCa LINE L1 1234 1798 -4628 * 234 304 17 52 chr2 90345700 90345815 -160342039 + MIR3 SINE MIR 91 201 -7 511 237 151 7 chr2 90346346 90346498 -160341356 + MER5A DNA MER1_type 16 189 0 187 220 0 60 chr2 90347261 90347311 -160340543 - L3b LINE CR1 -247 1336 1290 2005 83 63 33 chr2 90347346 90347648 -160340206 + AluY SINE Alu 1 311 0 359 282 7 35 chr2 90348478 90348620 -160339234 - MIR SINE MIR -2 260 123 443 308 58 32 chr2 90348759 90348996 -160338858 - MIR SINE MIR -5 257 16 371 290 131 51 chr2 90349212 90349547 -160338307 - L1ME4a LINE L1 -225 5896 5535 2611 29 10 3 chr2 90350381 90350693 -160337161 + AluYb8 SINE Alu 1 314 -4 280 196 0 0 chr2 90350709 90350765 -160337089 - MLT2B1 LTR ERVL 0 520 465 682 133 35 179 chr2 90351500 90351575 -160336279 - MLT2D LTR ERVL 0 464 380 456 19 0 0 chr2 90351575 90351628 -160336226 + (CA)n Simple_repeat Simple_repeat 2 54 0 1947 150 14 0 chr2 90351634 90351932 -160335922 - AluSx SINE Alu -10 302 4 682 133 35 179 chr2 90351932 90352059 -160335795 - MLT2D LTR ERVL -89 375 234 222 37 0 0 chr2 90353036 90353063 -160334791 + (TG)n Simple_repeat Simple_repeat 2 28 0 322 254 0 0 chr2 90354550 90354621 -160333233 + MIR SINE MIR 163 233 -29 201 289 0 19 chr2 90354593 90354645 -160333209 + L2 LINE L2 3251 3301 -12 * 207 0 0 0 chr2 90355599 90355622 -160332232 + (T)n Simple_repeat Simple_repeat 1 23 0 290 281 5 122 chr2 90355640 90355719 -160332135 - MIR SINE MIR -49 213 169 2352 66 0 20 chr2 90355719 90356023 -160331831 - AluY SINE Alu -13 298 1 290 281 5 122 chr2 90356023 90356139 -160331715 - MIR SINE MIR -93 169 41 2380 97 7 0 chr2 90356403 90356713 -160331141 - AluSx SINE Alu 0 312 1 192 416 30 0 chr2 90357059 90357160 -160330694 + MIR3 SINE MIR 57 160 -48 24 0 0 0 chr2 90357197 90357221 -160330633 + AT_rich Low_complexity Low_complexity 1 24 0 972 216 38 9 chr2 90358696 90358909 -160328945 - MER20 DNA MER1_type 0 219 1 498 291 97 6 chr2 90358912 90359077 -160328777 + MIR SINE MIR 12 191 -71 284 175 16 0 chr2 90359476 90359539 -160328315 + CT-rich Low_complexity Low_complexity 2 65 0 973 198 6 0 chr2 90359594 90359756 -160328098 - MER5A DNA MER1_type -26 163 1 333 277 43 0 chr2 90359784 90359878 -160327976 - MER5A DNA MER1_type 0 189 92 330 269 33 115 chr2 90359907 90360089 -160327765 + MER5B DNA MER1_type 5 171 -7 180 0 0 0 chr2 90361542 90361562 -160326292 + (T)n Simple_repeat Simple_repeat 1 20 0 276 77 0 0 chr2 90361988 90362027 -160325827 + (TA)n Simple_repeat Simple_repeat 1 39 0 24 0 0 0 chr2 90362134 90362158 -160325696 + GC_rich Low_complexity Low_complexity 1 24 0 215 293 22 33 chr2 90363809 90363902 -160323952 - MIR3 SINE MIR -39 169 77 2306 92 0 0 chr2 90364182 90364474 -160323380 + AluSg SINE Alu 4 295 -15 21 0 0 0 chr2 90364595 90364616 -160323238 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 90365028 90365057 -160322797 + AT_rich Low_complexity Low_complexity 1 29 0 720 297 16 31 chr2 90368855 90369093 -160318761 + MIR SINE MIR 7 241 -21 240 282 64 0 chr2 90369376 90369454 -160318400 + MIR SINE MIR 180 262 0 868 78 78 0 chr2 90369874 90370003 -160317851 - MER85 DNA T2_type 0 139 1 332 209 58 65 chr2 90370949 90371088 -160316766 - MER103 DNA DNA -19 147 10 182 356 0 0 chr2 90372073 90372132 -160315722 + L2 LINE L2 3214 3272 0 183 329 49 0 chr2 90372198 90372280 -160315574 - L2 LINE L2 -1874 1440 1355 441 0 0 0 chr2 90372766 90372815 -160315039 + (CA)n Simple_repeat Simple_repeat 2 50 0 589 216 20 0 chr2 90373155 90373303 -160314551 + L1MA10 LINE L1 6182 6332 -2 180 0 0 0 chr2 90373820 90373840 -160314014 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1243 247 24 79 chr2 90375285 90375446 -160312408 + L1MDa LINE L1 76 244 -6296 2160 112 0 0 chr2 90375446 90375742 -160312112 - AluY SINE Alu -15 296 1 1243 247 24 79 chr2 90375742 90375825 -160312029 + L1MDa LINE L1 244 330 -6210 270 0 0 0 chr2 90375825 90375855 -160311999 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1243 247 24 79 chr2 90375855 90376115 -160311739 + L1MDa LINE L1 330 553 -5987 192 256 0 0 chr2 90376176 90376215 -160311639 + L2 LINE L2 3263 3301 -12 182 222 0 0 chr2 90376960 90376996 -160310858 + L2 LINE L2 3262 3297 -16 272 173 0 0 chr2 90378474 90378526 -160309328 - L1 LINE L1 -2395 3751 3700 1153 173 3 73 chr2 90378529 90378818 -160309036 - AluJo SINE Alu -6 306 38 1971 190 62 50 chr2 90379031 90379727 -160308127 - L1 LINE L1 -2578 3568 2865 264 130 0 0 chr2 90379735 90379781 -160308073 + (TA)n Simple_repeat Simple_repeat 1 46 0 2251 106 0 0 chr2 90379802 90380094 -160307760 - AluSx SINE Alu -20 292 1 2512 109 10 0 chr2 90380095 90380479 -160307375 - L1P5 LINE L1 -369 5782 5395 2362 106 3 0 chr2 90380479 90380808 -160307046 + L1PB1 LINE L1 5816 6146 -5 1384 266 18 18 chr2 90380829 90381329 -160306525 - L1 LINE L1 -3267 2879 2380 195 261 0 0 chr2 90382264 90382310 -160305544 + L2 LINE L2 3215 3260 -12 437 218 65 8 chr2 90384406 90384530 -160303324 + MER94 DNA DNA 1 131 -3 266 248 59 14 chr2 90384947 90385034 -160302820 - MIR SINE MIR -61 147 80 339 65 0 0 chr2 90385339 90385385 -160302469 + (CA)n Simple_repeat Simple_repeat 2 47 0 430 271 0 0 chr2 90385521 90385639 -160302215 - L1MC/D LINE L1 -1995 5813 5696 266 245 59 14 chr2 90385655 90385742 -160302112 - MIR SINE MIR -61 147 80 23 68 0 0 chr2 90385966 90386010 -160301844 + AT_rich Low_complexity Low_complexity 1 44 0 1577 262 29 3 chr2 90386042 90386424 -160301430 + L2 LINE L2 2403 2794 -520 2039 119 0 46 chr2 90386428 90386755 -160301099 + AluSx SINE Alu 1 312 0 710 172 220 0 chr2 90386885 90387071 -160300783 + MER33 DNA MER1_type 2 228 -96 419 256 12 73 chr2 90387079 90387243 -160300611 + L2 LINE L2 2786 2939 -375 1992 52 1 0 chr2 90387245 90387492 -160300362 - L1PA8 LINE L1 -355 5810 5560 2668 60 3 3 chr2 90387492 90387839 -160300015 + L1PA8 LINE L1 5821 6171 -1 1992 52 1 0 chr2 90387839 90387867 -160299987 - L1P4 LINE L1 -605 5560 5534 923 293 64 17 chr2 90387870 90388215 -160299639 + L2 LINE L2 2953 3313 0 512 295 21 11 chr2 90388303 90388493 -160299361 - MARNA DNA Mariner -217 369 178 814 262 52 5 chr2 90389869 90390079 -160297775 - MIR SINE MIR -38 224 5 1863 125 4 8 chr2 90390545 90390809 -160297045 + AluSx SINE Alu 23 285 -27 474 244 35 0 chr2 90391179 90391294 -160296560 + MIR SINE MIR 124 242 -20 246 32 0 0 chr2 90391384 90391415 -160296439 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 286 232 263 0 chr2 90392598 90392693 -160295161 - MIR3 SINE MIR -52 156 37 1839 253 69 8 chr2 90393108 90393587 -160294267 + L2 LINE L2 2806 3313 0 266 191 15 0 chr2 90394139 90394207 -160293647 + L1MA8 LINE L1 6223 6291 0 654 267 78 16 chr2 90394230 90394485 -160293369 + MER102a DNA MER1_type 32 302 -28 181 244 115 64 chr2 90394486 90394564 -160293290 - MIR SINE MIR -169 93 12 349 274 17 17 chr2 90394632 90394749 -160293105 + L2 LINE L2 2941 3057 -215 200 272 25 12 chr2 90396059 90396140 -160291714 + CT-rich Low_complexity Low_complexity 2 83 0 662 183 86 17 chr2 90396695 90396870 -160290984 + MER53 DNA DNA 1 187 -2 334 292 45 34 chr2 90397605 90397783 -160290071 + MER89-int LTR ERV1 2797 2976 -3825 3928 147 66 10 chr2 90398273 90399041 -160288813 - L1MB7 LINE L1 -21 6163 5353 1598 246 5 0 chr2 90400763 90401203 -160286651 + L1M4 LINE L1 2432 2873 -3273 1959 96 0 11 chr2 90401304 90401575 -160286279 + AluSc SINE Alu 26 293 -16 218 310 0 3 chr2 90402543 90402609 -160285245 + L2 LINE L2 3240 3304 -9 678 201 81 0 chr2 90402689 90402838 -160285016 + ORSL DNA AcHobo 3 163 -112 403 235 47 0 chr2 90402839 90402924 -160284930 + MIR SINE MIR 173 261 -1 1555 237 96 49 chr2 90403861 90404516 -160283338 - HAL1 LINE L1 -5 2502 1817 561 349 45 30 chr2 90404545 90404809 -160283045 + L2 LINE L2 3004 3271 -1 584 213 19 46 chr2 90405264 90405457 -160282397 + MIR SINE MIR 18 199 -62 23 0 0 0 chr2 90406488 90406511 -160281343 + AT_rich Low_complexity Low_complexity 1 23 0 2156 117 3 0 chr2 90406514 90406813 -160281041 + AluSq SINE Alu 1 300 -13 21 36 0 0 chr2 90407147 90407175 -160280679 + AT_rich Low_complexity Low_complexity 1 28 0 185 347 69 0 chr2 90407295 90407367 -160280487 - L2 LINE L2 -2 3270 3194 266 180 25 49 chr2 90407615 90407737 -160280117 + (TCTA)n Simple_repeat Simple_repeat 2 120 0 432 250 117 27 chr2 90408060 90408248 -160279606 + MIR SINE MIR 13 217 -45 591 314 69 48 chr2 90409222 90409556 -160278298 + L2 LINE L2 2928 3268 -4 314 259 106 12 chr2 90410342 90410427 -160277427 - MIR SINE MIR -93 115 23 2550 121 111 5 chr2 90410474 90410861 -160276993 + MSTA LTR MaLR 1 428 0 235 261 0 0 chr2 90412839 90412885 -160274969 - MIR3 SINE MIR -22 186 141 228 279 0 16 chr2 90413001 90413062 -160274792 - MIR SINE MIR -64 144 85 200 307 27 13 chr2 90413167 90413242 -160274612 + MIR3 SINE MIR 4 79 -129 181 323 100 62 chr2 90413249 90413379 -160274475 + MIR3 SINE MIR 38 172 -36 459 248 0 35 chr2 90413524 90413665 -160274189 - MER113 DNA MER1_type? -385 136 1 409 270 151 26 chr2 90413804 90413956 -160273898 - MIR3 SINE MIR -11 197 27 292 273 102 0 chr2 90415829 90415917 -160271937 - MIR SINE MIR -78 130 34 260 286 12 0 chr2 90416809 90416893 -160270961 - MER20 DNA MER1_type 0 219 135 636 278 50 20 chr2 90418385 90418583 -160269271 - MIR SINE MIR 0 262 59 333 172 0 0 chr2 90420246 90420310 -160267544 + (CA)n Simple_repeat Simple_repeat 2 65 0 346 303 0 0 chr2 90421525 90421614 -160266240 + MER81 DNA DNA 7 95 -19 5533 188 23 19 chr2 90421643 90422980 -160264874 - L1MD2 LINE L1 -3 6356 3973 1957 205 49 31 chr2 90422983 90423436 -160264418 + MLT1C LTR MaLR 7 467 0 2407 152 14 5 chr2 90423439 90423868 -160263986 - L1MD2 LINE L1 -2169 3977 3545 1345 146 5 32 chr2 90424107 90424326 -160263528 + MER20 DNA MER1_type 7 219 0 258 346 0 0 chr2 90425934 90426041 -160261813 + C-rich Low_complexity Low_complexity 1 107 0 2275 104 0 0 chr2 90428243 90428551 -160259303 + AluY SINE Alu 1 308 -3 278 250 99 62 chr2 90428905 90429097 -160258757 + L1ME4a LINE L1 5923 6121 0 223 282 129 35 chr2 90429583 90429668 -160258186 + L2 LINE L2 3217 3309 -4 330 314 155 19 chr2 90430416 90430623 -160257231 - MIR SINE MIR 0 262 28 2318 179 14 36 chr2 90430661 90430694 -160257160 - MLT2D LTR ERVL -4 410 378 330 26 0 0 chr2 90430694 90430733 -160257121 + (TG)n Simple_repeat Simple_repeat 2 40 0 2318 179 14 36 chr2 90430733 90431118 -160256736 - MLT2D LTR ERVL -36 378 1 38091 51 4 1 chr2 90431293 90436810 -160251044 - L1PA4 LINE L1 0 6155 623 731 47 0 0 chr2 90436810 90436896 -160250958 - L1PA4 LINE L1 -6050 96 11 213 238 0 0 chr2 90437089 90437131 -160250723 + L2 LINE L2 3261 3302 -11 222 215 0 15 chr2 90438075 90438086 -160249768 + (TAA)n Simple_repeat Simple_repeat 3 13 -53 2592 121 77 46 chr2 90438086 90438501 -160249353 - MSTA LTR MaLR 0 428 1 222 215 0 15 chr2 90438501 90438554 -160249300 + (TAA)n Simple_repeat Simple_repeat 13 66 0 555 252 98 0 chr2 90438602 90438745 -160249109 - MIR SINE MIR -89 173 17 465 217 118 33 chr2 90438991 90439143 -160248711 - MIR SINE MIR -1 261 97 510 115 35 0 chr2 90439450 90439537 -160248317 + L1MB4 LINE L1 6091 6180 0 534 389 87 12 chr2 90439736 90440314 -160247540 + L2 LINE L2 189 809 -2505 1153 175 25 10 chr2 90440316 90440516 -160247338 - MER3 DNA MER1_type -2 207 5 849 214 101 6 chr2 90440586 90440745 -160247109 + FAM SINE Alu 2 175 0 312 153 0 0 chr2 90440768 90440827 -160247027 + Alu SINE Alu 243 301 -1 7139 120 32 16 chr2 90440879 90441698 -160246156 + L1PB1 LINE L1 1 806 -6061 9546 45 2 1 chr2 90441698 90442768 -160245086 + MER11C LTR ERVK 1 1071 0 7139 120 32 16 chr2 90442768 90443965 -160243889 + L1PB1 LINE L1 806 6866 -1 182 234 85 0 chr2 90444016 90444063 -160243791 - L2 LINE L2 -37 3235 3185 276 161 71 0 chr2 90444063 90444119 -160243735 + L1M4 LINE L1 4720 4779 -1367 780 245 7 62 chr2 90444138 90444295 -160243559 + L1M4 LINE L1 4874 5011 -1135 2370 92 0 7 chr2 90444295 90444599 -160243255 + AluSc SINE Alu 1 302 -7 780 245 7 62 chr2 90444599 90444714 -160243140 + L1M4 LINE L1 5011 5131 -1015 990 178 22 6 chr2 90444720 90444900 -160242954 + L1MD1 LINE L1 6060 6242 0 432 312 52 6 chr2 90444900 90445073 -160242781 - L2 LINE L2 -1295 2019 1839 766 148 39 8 chr2 90445079 90445207 -160242647 + MSTB LTR MaLR 215 346 -80 26 0 0 0 chr2 90445207 90445233 -160242621 + AT_rich Low_complexity Low_complexity 1 26 0 261 159 0 0 chr2 90445233 90445296 -160242558 + GA-rich Low_complexity Low_complexity 2 64 0 2071 101 18 0 chr2 90445298 90445575 -160242279 - AluSx SINE Alu -30 282 1 1367 131 0 0 chr2 90445660 90445851 -160242003 + L1PA16 LINE L1 12 202 -6647 7003 129 25 89 chr2 90445851 90447149 -160240705 + L1PA16 LINE L1 604 1819 -5030 14378 210 25 22 chr2 90447250 90449818 -160238036 + L1PA16 LINE L1 2296 4854 -2015 2538 166 31 24 chr2 90449818 90450241 -160237613 + MSTB LTR MaLR 1 426 0 14378 210 25 22 chr2 90450241 90452003 -160235851 + L1PA16 LINE L1 4854 6642 -227 1602 159 55 0 chr2 90452003 90452274 -160235580 + AluJb SINE Alu 1 286 -26 14378 210 25 22 chr2 90452274 90452494 -160235360 + L1PA16 LINE L1 6642 6860 -9 1551 295 135 67 chr2 90452508 90452823 -160235031 - L2 LINE L2 -1471 1843 1551 1657 173 0 43 chr2 90452823 90453147 -160234707 - AluJb SINE Alu -2 310 1 1551 295 135 67 chr2 90453147 90453443 -160234411 - L2 LINE L2 -1763 1551 1277 2391 122 22 33 chr2 90453443 90453811 -160234043 - THE1B LTR MaLR 0 364 1 1551 295 135 67 chr2 90453811 90454728 -160233126 - L2 LINE L2 -2037 1277 189 211 348 72 55 chr2 90455210 90455446 -160232408 + L2 LINE L2 1236 1475 -1839 248 0 0 30 chr2 90455534 90455567 -160232287 + (TC)n Simple_repeat Simple_repeat 1 32 0 * 414 57 0 0 chr2 90455566 90455619 -160232235 + (CA)n Simple_repeat Simple_repeat 1 53 0 1293 122 0 0 chr2 90455669 90455849 -160232005 + AluSg/x SINE Alu 126 305 -7 216 160 20 40 chr2 90455954 90456004 -160231850 + GA-rich Low_complexity Low_complexity 2 50 0 20349 70 4 1 chr2 90456149 90458923 -160228931 + L1P LINE L1 4 2786 -3360 290 136 0 0 chr2 90459026 90459070 -160228784 + MER74B LTR ERVL 10 53 -569 1506 236 28 13 chr2 90459102 90459500 -160228354 + MER74B LTR ERVL 209 612 -10 7022 216 27 9 chr2 90459524 90460012 -160227842 + L1M4 LINE L1 3494 3972 -2174 2304 178 34 2 chr2 90460012 90460427 -160227427 - MSTB1 LTR MaLR 0 432 5 7022 216 27 9 chr2 90460427 90461729 -160226125 + L1M4 LINE L1 3972 5316 -830 7039 144 28 8 chr2 90461730 90462963 -160224891 + L1M3f LINE L1 2 1259 -4069 6479 230 75 5 chr2 90462967 90464490 -160223364 + L1M2 LINE L1 2 1632 -5217 1269 298 77 37 chr2 90464492 90465113 -160222741 + MER109 Unknown Unknown 1617 2262 -170 275 299 56 9 chr2 90466365 90466472 -160221382 + L2 LINE L2 2953 3064 -208 224 111 56 0 chr2 90466802 90466838 -160221016 - MIR3 SINE MIR -50 158 121 353 182 102 23 chr2 90466843 90466931 -160220923 - MIR3 SINE MIR -54 154 60 184 274 0 20 chr2 90466995 90467046 -160220808 + L2 LINE L2 3264 3313 0 363 255 31 20 chr2 90467276 90467374 -160220480 - L2 LINE L2 -1015 2299 2201 12898 40 1 0 chr2 90467385 90469062 -160218792 - L1P LINE L1 -1816 4330 2653 561 204 31 41 chr2 90469173 90469369 -160218485 - L1ME2 LINE L1 -93 6071 5878 323 280 40 32 chr2 90469865 90469990 -160217864 + L3 LINE CR1 540 665 -912 643 289 35 0 chr2 90470142 90470339 -160217515 + L3 LINE CR1 653 856 -721 2294 220 123 30 chr2 90471381 90472082 -160215772 - MER21B LTR ERV1 -51 812 47 471 191 0 0 chr2 90472083 90472167 -160215687 - MER21B LTR ERV1 -768 95 12 1970 121 21 0 chr2 90472999 90473279 -160214575 - AluSx SINE Alu -26 286 1 264 263 46 72 chr2 90475470 90475622 -160212232 - MIR SINE MIR -50 212 65 479 244 28 103 chr2 90475627 90475840 -160212014 - MIR SINE MIR -9 253 57 393 305 76 27 chr2 90476355 90476617 -160211237 + L1ME4a LINE L1 5124 5398 -748 1830 215 92 17 chr2 90476672 90476889 -160210965 + L1ME4a LINE L1 5477 5676 -445 1895 159 0 7 chr2 90476889 90477178 -160210676 - AluJo SINE Alu -25 287 1 1830 215 92 17 chr2 90477178 90477560 -160210294 + L1ME4a LINE L1 5676 6121 0 651 167 92 0 chr2 90478304 90478424 -160209430 - FRAM SINE Alu -6 170 40 556 290 80 18 chr2 90479044 90479268 -160208586 - MIR SINE MIR -11 251 14 22 56 0 0 chr2 90479353 90479389 -160208465 + AT_rich Low_complexity Low_complexity 1 36 0 2359 90 6 0 chr2 90479446 90479757 -160208097 + AluSq SINE Alu 1 313 0 649 259 98 26 chr2 90479865 90480244 -160207610 - L1MC5 LINE L1 -47 7914 7509 272 214 0 29 chr2 90480885 90480955 -160206899 + L2 LINE L2 3182 3249 -23 2270 119 27 10 chr2 90482447 90482849 -160205005 - Cheshire DNA MER1_type 0 2420 2012 25 0 0 0 chr2 90482849 90482874 -160204980 + AT_rich Low_complexity Low_complexity 1 25 0 311 188 58 0 chr2 90482879 90482948 -160204906 - L1MD3 LINE L1 -18 7977 7905 4014 190 14 15 chr2 90482951 90484214 -160203640 - L1MB8 LINE L1 -17 6161 4903 1298 186 115 26 chr2 90484214 90484563 -160203291 - L1MC3 LINE L1 -96 7689 7310 1496 132 79 0 chr2 90484567 90484847 -160203007 - Cheshire DNA MER1_type -389 2031 1730 1870 110 103 0 chr2 90484847 90485120 -160202734 - AluSx SINE Alu -11 301 1 1940 159 3 0 chr2 90485122 90485417 -160202437 - AluJb SINE Alu -16 296 1 1094 151 8 101 chr2 90485426 90485591 -160202263 - L1M4 LINE L1 -521 5663 5529 2173 138 3 0 chr2 90485591 90485902 -160201952 - AluSx SINE Alu 0 312 1 1094 151 8 101 chr2 90485902 90485994 -160201860 - L1M4 LINE L1 -655 5529 5430 1299 127 39 0 chr2 90485994 90486223 -160201631 - Cheshire DNA MER1_type -678 1742 1505 389 277 0 0 chr2 90486217 90486311 -160201543 - Cheshire DNA MER1_type -2314 106 13 * 404 82 27 0 chr2 90486537 90486610 -160201244 + (TTTTA)n Simple_repeat Simple_repeat 3 77 0 712 213 134 42 chr2 90486924 90487163 -160200691 - MIR SINE MIR 0 262 2 800 210 55 10 chr2 90487297 90487497 -160200357 + MER3 DNA MER1_type 1 209 0 1277 63 29 0 chr2 90487864 90488039 -160199815 - L1PA6 LINE L1 -6 6148 5969 3850 186 87 28 chr2 90488256 90489516 -160198338 - L1MD2 LINE L1 0 6359 5025 1759 176 3 37 chr2 90490182 90490505 -160197349 + AluJo SINE Alu 1 312 0 200 279 0 0 chr2 90490798 90490841 -160197013 + L2 LINE L2 3215 3257 -15 183 235 0 0 chr2 90491158 90491192 -160196662 + L2 LINE L2 3268 3301 -12 2339 180 59 11 chr2 90491751 90492324 -160195530 + L1MDa LINE L1 1674 2274 -4266 769 186 5 30 chr2 90492325 90492524 -160195330 + L1MDa LINE L1 3173 3366 -3174 718 294 30 47 chr2 90492521 90492948 -160194906 + L1M3d LINE L1 183 823 -5480 * 262 303 25 62 chr2 90493007 90493169 -160194685 + L1M3d LINE L1 934 1089 -5214 3291 239 122 15 chr2 90493320 90494483 -160193371 + L1 LINE L1 777 2055 -4329 2079 108 49 0 chr2 90494483 90494769 -160193085 + AluSq SINE Alu 1 300 -13 3291 239 122 15 chr2 90494769 90495159 -160192695 + L1 LINE L1 2055 2402 -3982 1116 164 3 153 chr2 90495155 90495314 -160192540 + L1 LINE L1 4999 5074 -1308 * 3335 86 23 8 chr2 90495314 90495791 -160192063 + L1PA11 LINE L1 5687 6171 -3 1116 164 3 153 chr2 90495791 90495996 -160191858 + L1 LINE L1 5074 5308 -1074 248 440 0 9 chr2 90496270 90496379 -160191475 - L2 LINE L2 -53 3219 3112 1149 164 30 17 chr2 90496474 90496706 -160191148 + L1PB4 LINE L1 5922 6156 0 315 0 0 0 chr2 90496803 90496838 -160191016 + (CA)n Simple_repeat Simple_repeat 2 36 0 484 297 139 27 chr2 90497956 90498286 -160189568 - L1MC4a LINE L1 -1842 5966 5600 859 240 86 3 chr2 90498388 90498680 -160189174 - L1MC4 LINE L1 -190 7852 7537 1724 223 11 86 chr2 90498783 90499434 -160188420 - L1MDa LINE L1 -3326 3080 2479 1718 109 82 55 chr2 90499434 90499763 -160188091 - MER44D DNA MER2_type -1 608 1 1853 205 96 13 chr2 90499789 90500403 -160187451 - L1MDa LINE L1 -3995 2411 1747 433 158 10 0 chr2 90500397 90500498 -160187356 - L1MDa LINE L1 -5141 1268 1167 * 310 292 25 42 chr2 90500522 90500642 -160187212 + L1MC5 LINE L1 7451 7568 -393 752 91 8 30 chr2 90500653 90500785 -160187069 - L1MA7 LINE L1 0 6291 6163 1802 173 10 13 chr2 90500787 90500973 -160186881 - AluJb SINE Alu 0 312 126 189 0 0 0 chr2 90500973 90500994 -160186860 + (TG)n Simple_repeat Simple_repeat 2 22 0 1802 173 10 13 chr2 90500994 90501120 -160186734 - AluJb SINE Alu -186 126 1 1724 144 22 58 chr2 90501144 90501177 -160186677 - L1MA7 LINE L1 -130 6161 6128 880 94 0 0 chr2 90501177 90501304 -160186550 - L1PB1 LINE L1 -4 6147 6021 1724 144 22 58 chr2 90501304 90501632 -160186222 - L1MA7 LINE L1 -163 6128 5813 * 3748 225 121 15 chr2 90501615 90502680 -160185174 - L1MDa LINE L1 -5225 1184 7 297 140 0 0 chr2 90502687 90502737 -160185117 + Charlie1 DNA MER1_type 2712 2761 0 393 287 0 0 chr2 90503973 90504067 -160183787 - L2 LINE L2 -11 3261 3168 968 192 33 0 chr2 90504542 90504724 -160183130 + MER3 DNA MER1_type 1 188 -21 426 68 0 0 chr2 90505011 90505070 -160182784 + L1PA3 LINE L1 6097 6155 0 2146 101 3 0 chr2 90505136 90505422 -160182432 + AluSp SINE Alu 1 287 -26 1284 83 0 0 chr2 90505438 90505644 -160182210 + (TA)n Simple_repeat Simple_repeat 1 206 0 207 0 0 0 chr2 90505643 90505666 -160182188 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 308 214 0 0 chr2 90506217 90506273 -160181581 - L2 LINE L2 0 3272 3217 412 190 80 0 chr2 90506739 90506839 -160181015 + L1ME4a LINE L1 6012 6119 -2 559 239 38 8 chr2 90507245 90507503 -160180351 - L1ME4a LINE L1 -2 6119 5798 1829 197 26 32 chr2 90609059 90609379 -160078475 + MER47B DNA MER2_type 17 336 -1987 2208 129 0 0 chr2 90609379 90609688 -160078166 - AluSx SINE Alu -3 309 1 1829 197 26 32 chr2 90609688 90609747 -160078107 + MER47B DNA MER2_type 336 394 -24 1554 194 3 11 chr2 90610231 90610515 -160077339 + AluJo SINE Alu 1 282 -30 2327 110 0 0 chr2 90610794 90611093 -160076761 - AluSq SINE Alu -14 299 1 402 278 52 0 chr2 90611097 90611212 -160076642 + MER94 DNA DNA 5 125 -9 315 289 72 61 chr2 90611619 90611799 -160076055 - L2 LINE L2 -12 3301 3120 781 128 0 0 chr2 90612055 90612157 -160075697 + AluJ/FLAM SINE Alu 1 102 -210 2406 214 67 14 chr2 90612855 90613400 -160074454 + L1ME1 LINE L1 5549 6128 -38 2088 116 23 13 chr2 90613400 90613710 -160074144 - AluSp SINE Alu 0 313 1 2406 214 67 14 chr2 90613710 90613744 -160074110 + L1ME1 LINE L1 6128 6159 -7 896 233 54 8 chr2 90614727 90614985 -160072869 - LTR37B LTR ERV1 -2 466 197 1871 167 26 10 chr2 90615019 90615345 -160072509 + AluSx SINE Alu 1 312 0 529 167 0 18 chr2 90615347 90615461 -160072393 + GA-rich Low_complexity Low_complexity 3 114 0 1045 274 104 30 chr2 90616159 90616775 -160071079 + L2 LINE L2 2650 3310 -3 1930 168 0 0 chr2 90616889 90617192 -160070662 - AluSx SINE Alu -9 303 1 838 249 129 42 chr2 90618282 90618692 -160069162 - MLT1J1 LTR MaLR 0 446 1 264 250 56 56 chr2 90618899 90619007 -160068847 - MIR SINE MIR -36 226 119 2157 115 0 3 chr2 90619542 90619837 -160068017 - AluSq SINE Alu -19 294 1 1574 208 59 65 chr2 90619870 90620015 -160067839 - L1ME2 LINE L1 0 6164 6020 2159 95 32 0 chr2 90620015 90620299 -160067555 - AluSg SINE Alu -17 293 1 1574 208 59 65 chr2 90620299 90620653 -160067201 - L1ME2 LINE L1 -144 6020 5666 1683 168 0 13 chr2 90620653 90620956 -160066898 - AluY SINE Alu -12 299 1 1574 208 59 65 chr2 90620956 90620979 -160066875 - L1ME2 LINE L1 -498 5666 5644 3449 129 104 47 chr2 90621085 90621765 -160066089 + LTR8A LTR ERV1 9 727 0 622 228 68 0 chr2 90622976 90623138 -160064716 - MIR SINE MIR -87 175 3 868 158 0 33 chr2 90623462 90623614 -160064240 - AluJo SINE Alu -165 147 1 306 153 0 0 chr2 90625081 90625140 -160062714 + (TG)n Simple_repeat Simple_repeat 2 60 0 2128 103 0 14 chr2 90625869 90626160 -160061694 - AluSc SINE Alu -22 287 1 613 237 184 56 chr2 90626919 90627228 -160060626 - L1ME2 LINE L1 -10 6088 5735 1403 141 77 5 chr2 90627228 90627448 -160060406 - MER46A DNA MER2_type 0 236 1 613 237 184 56 chr2 90627448 90627459 -160060395 - L1ME2 LINE L1 -363 5735 5727 1317 257 31 26 chr2 90627474 90627871 -160059983 - L1ME2 LINE L1 -524 5574 5171 2587 50 0 0 chr2 90627871 90628169 -160059685 - AluY SINE Alu -13 298 1 1317 257 31 26 chr2 90628169 90628446 -160059408 - L1ME2 LINE L1 -927 5171 4897 779 171 67 30 chr2 90628455 90628619 -160059235 - MER68 LTR ERV1 -256 306 137 1192 268 64 30 chr2 90628632 90629069 -160058785 - L1ME2 LINE L1 -5520 550 99 627 178 204 7 chr2 90629089 90629241 -160058613 + MER58A DNA MER1_type 43 224 0 270 244 70 35 chr2 90629257 90629343 -160058511 - L1ME2 LINE L1 -5979 91 3 204 284 32 32 chr2 90629540 90629635 -160058219 - L2 LINE L2 0 3272 3178 817 154 8 0 chr2 90629761 90629876 -160057978 + AluSq/x SINE Alu 2 120 -193 197 33 33 0 chr2 90629876 90629906 -160057948 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 901 107 0 0 chr2 90630348 90630469 -160057385 + AluSg/x SINE Alu 184 304 -8 1569 221 94 22 chr2 90630484 90631017 -160056837 + L1MD1 LINE L1 4696 5266 -880 1941 224 37 4 chr2 90631024 90631484 -160056370 + L1MD1 LINE L1 5397 5871 -371 458 214 31 10 chr2 90631480 90631578 -160056276 + L1ME1 LINE L1 6017 6116 -50 * 1974 113 51 14 chr2 90631935 90632227 -160055627 + AluSg SINE Alu 1 303 -7 2127 125 0 31 chr2 90632388 90632708 -160055146 + AluSx SINE Alu 1 310 -2 649 142 149 40 chr2 90632834 90632982 -160054872 + MER3 DNA MER1_type 25 188 -21 2333 74 0 29 chr2 90633025 90633334 -160054520 + AluY SINE Alu 1 300 -11 316 293 107 14 chr2 90633922 90634062 -160053792 + MIR SINE MIR 54 206 -56 239 289 89 52 chr2 90634677 90634812 -160053042 + L2 LINE L2 2670 2809 -505 25 31 0 0 chr2 90635258 90635290 -160052564 + AT_rich Low_complexity Low_complexity 1 32 0 309 96 22 0 chr2 90635920 90635977 -160051877 + AluSp SINE Alu 1 44 -258 2018 143 0 3 chr2 90636080 90636388 -160051466 - AluSx SINE Alu -5 307 1 1938 122 18 0 chr2 90636774 90637052 -160050802 - AluSx SINE Alu -29 283 1 1991 95 4 0 chr2 90638115 90638367 -160049487 + AluSp SINE Alu 44 296 -17 2437 87 0 3 chr2 90638494 90638803 -160049051 + AluY SINE Alu 1 308 -3 614 250 111 41 chr2 90638862 90639106 -160048748 + MIR SINE MIR 1 261 -1 565 187 28 0 chr2 90640295 90640402 -160047452 - L1MB3 LINE L1 -65 6118 6009 987 189 25 0 chr2 90640405 90640601 -160047253 - L1MB3 LINE L1 -100 6083 5883 1954 146 0 28 chr2 90641463 90641784 -160046070 - AluJb SINE Alu 0 312 1 426 266 18 0 chr2 90641832 90641945 -160045909 + MIR SINE MIR 82 196 -66 509 225 141 47 chr2 90641960 90642173 -160045681 - MIR SINE MIR -14 248 16 23 0 0 0 chr2 90642384 90642407 -160045447 + AT_rich Low_complexity Low_complexity 1 23 0 260 292 118 37 chr2 90643302 90643463 -160044391 - MER5B DNA MER1_type 0 178 5 2251 103 0 10 chr2 90643811 90644143 -160043711 + AluY SINE Alu 1 329 0 547 309 19 29 chr2 90646306 90646516 -160041338 + MIR SINE MIR 34 241 -21 1138 107 6 51 chr2 90646659 90646836 -160041018 + AluSg/x SINE Alu 130 298 -14 321 26 0 0 chr2 90646940 90646978 -160040876 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 1086 110 0 0 chr2 90648080 90648235 -160039619 - AluSg/x SINE Alu 0 312 158 22 0 0 0 chr2 90648623 90648645 -160039209 + AT_rich Low_complexity Low_complexity 1 22 0 336 48 0 0 chr2 90648747 90648789 -160039065 + (TA)n Simple_repeat Simple_repeat 2 43 0 2088 156 0 0 chr2 90648789 90649097 -160038757 - AluSx SINE Alu -3 309 2 865 200 71 13 chr2 90650228 90650383 -160037471 + FAM SINE Alu 1 164 -21 2250 107 0 10 chr2 90650720 90651019 -160036835 + AluSx SINE Alu 1 296 -16 472 262 169 6 chr2 90652178 90652361 -160035493 + MIR SINE MIR 50 262 0 1545 179 4 4 chr2 90653233 90653490 -160034364 - AluJb SINE Alu -16 296 40 2269 73 3 20 chr2 90653651 90653952 -160033902 + AluY SINE Alu 1 296 -15 922 292 29 36 chr2 90654237 90654651 -160033203 + L1MDa LINE L1 27 437 -6103 419 239 9 0 chr2 90654661 90654770 -160033084 - L1MEc LINE L1 -2139 4007 3898 778 233 55 0 chr2 90654774 90654937 -160032917 + MER58C DNA MER1_type 5 176 -39 879 180 6 38 chr2 90654954 90655137 -160032717 + AluJb SINE Alu 129 305 -7 256 224 0 0 chr2 90655150 90655208 -160032646 + L1M4 LINE L1 2604 2661 -3485 * 592 252 117 18 chr2 90655191 90655512 -160032342 - L1MEc LINE L1 -3696 2450 2110 9316 111 42 30 chr2 90655512 90655846 -160032008 - Tigger1 DNA MER2_type -587 1831 1502 2453 71 0 0 chr2 90655846 90656142 -160031712 - AluY SINE Alu -15 296 1 9316 111 42 30 chr2 90656142 90657622 -160030232 - Tigger1 DNA MER2_type -916 1502 5 338 210 89 51 chr2 90657627 90657784 -160030070 + L1ME4a LINE L1 5789 5951 -219 2475 59 0 0 chr2 90658080 90658368 -160029486 + AluY SINE Alu 1 288 -23 1804 107 59 11 chr2 90658493 90658763 -160029091 - AluSx SINE Alu -29 283 1 24 0 0 29 chr2 90659304 90659326 -160028528 + AT_rich Low_complexity Low_complexity 1 23 -11 2325 100 0 0 chr2 90659326 90659617 -160028237 - AluSg SINE Alu -19 291 1 24 0 0 29 chr2 90659617 90659629 -160028225 + AT_rich Low_complexity Low_complexity 23 34 0 1788 153 47 10 chr2 90661193 90661493 -160026361 + AluJo SINE Alu 1 311 -1 260 302 128 0 chr2 90661587 90661736 -160026118 + L1ME4a LINE L1 5952 6119 -2 2463 54 0 3 chr2 90661752 90662048 -160025806 - AluY SINE Alu -16 295 1 1850 236 99 70 chr2 90662814 90663636 -160024218 - L1ME3A LINE L1 -31 6139 5274 1355 138 49 0 chr2 90663636 90663860 -160023994 - L1MB2 LINE L1 -2 6169 5935 1850 236 99 70 chr2 90663860 90664148 -160023706 - L1ME3A LINE L1 -896 5274 4996 667 291 99 13 chr2 90664186 90664568 -160023286 - L1ME3A LINE L1 -1237 4909 4495 2635 34 0 0 chr2 90665567 90665862 -160021992 - AluY SINE Alu -16 295 1 180 125 0 0 chr2 90666012 90666044 -160021810 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 2473 67 0 3 chr2 90667598 90667896 -160019958 - AluY SINE Alu -14 297 1 2474 79 0 3 chr2 90668041 90668345 -160019509 - AluY SINE Alu -6 305 3 2252 116 0 0 chr2 90668349 90668652 -160019202 - AluSx SINE Alu -9 303 1 287 305 102 0 chr2 90669803 90669931 -160017923 - L2 LINE L2 -5 3267 3127 1887 143 75 28 chr2 90671173 90671531 -160016323 - THE1C LTR MaLR 0 375 1 234 107 27 80 chr2 90672544 90672619 -160015235 + (TATAA)n Simple_repeat Simple_repeat 2 72 0 270 197 136 0 chr2 90673670 90673736 -160014118 - L1MB2 LINE L1 -7 6164 6090 1461 224 112 0 chr2 90673837 90674194 -160013660 - L1MD2 LINE L1 -36 6717 6321 1520 162 0 0 chr2 90674194 90674422 -160013432 + AluJb SINE Alu 1 228 -84 4351 150 23 10 chr2 90674437 90675138 -160012716 - MER50 LTR ERV1 -24 710 1 337 183 28 0 chr2 90675138 90675201 -160012653 + AluJb SINE Alu 238 302 0 716 224 57 13 chr2 90675214 90675524 -160012330 - L1MD2 LINE L1 -427 6326 5850 300 172 35 11 chr2 90675660 90675729 -160012125 - L1MD2 LINE L1 -870 5670 5604 2329 110 0 0 chr2 90675729 90676029 -160011825 - AluSx SINE Alu -12 300 1 947 109 17 17 chr2 90676034 90676209 -160011645 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 300 172 35 11 chr2 90676209 90676220 -160011634 - L1MD2 LINE L1 -939 5601 5582 194 190 0 35 chr2 90676222 90676280 -160011574 + CT-rich Low_complexity Low_complexity 3 58 0 * 376 130 29 0 chr2 90676277 90676346 -160011508 + C-rich Low_complexity Low_complexity 1 71 0 726 243 62 17 chr2 90676346 90676523 -160011331 - FAM SINE Alu 0 49 1 5557 204 61 37 chr2 90677005 90677772 -160010082 - L1MD2 LINE L1 -2217 4323 3576 1566 201 23 3 chr2 90677772 90678071 -160009783 - AluJo SINE Alu -7 305 1 5557 204 61 37 chr2 90678071 90680365 -160007489 - L1MD2 LINE L1 -2964 3576 1192 2308 256 50 45 chr2 90680381 90680931 -160006923 - L1MD2 LINE L1 -5784 756 200 2048 130 0 23 chr2 90680931 90681230 -160006624 + AluSx SINE Alu 1 292 -20 2308 256 50 45 chr2 90681230 90681413 -160006441 - L1MD2 LINE L1 -6340 200 19 1844 156 120 93 chr2 90681721 90682271 -160005583 + L1MD2 LINE L1 5793 6357 -2 551 169 75 26 chr2 90683591 90683753 -160004101 + L1MEc LINE L1 2210 2359 -3856 2390 92 68 0 chr2 90685030 90685368 -160002486 - THE1B LTR MaLR -3 361 1 535 254 46 60 chr2 90686272 90686489 -160001365 + L1MEc LINE L1 39 252 -6144 2504 84 3 0 chr2 90687225 90687534 -160000320 + AluSp SINE Alu 1 310 -3 209 137 39 0 chr2 90688660 90688711 -159999143 + GA-rich Low_complexity Low_complexity 4 56 0 2236 116 3 6 chr2 90688850 90689161 -159998693 - AluSg SINE Alu 0 310 1 791 20 0 10 chr2 90689454 90689552 -159998302 + (TTTC)n Simple_repeat Simple_repeat 2 98 0 504 228 122 78 chr2 90689812 90690067 -159997787 + L2 LINE L2 3048 3313 0 2208 114 0 3 chr2 90690549 90690846 -159997008 - AluSx SINE Alu -16 296 1 242 326 163 9 chr2 90690961 90691305 -159996549 + L2 LINE L2 2327 2723 -591 340 306 83 65 chr2 90691369 90691767 -159996087 + L2 LINE L2 2848 3252 -20 206 350 10 10 chr2 90692297 90692400 -159995454 + MIR3 SINE MIR 89 191 -17 2482 63 10 7 chr2 90693090 90693393 -159994461 - AluY SINE Alu -7 304 1 402 181 64 11 chr2 90694131 90694225 -159993629 + MIR SINE MIR 98 196 -66 844 453 0 33 chr2 90695297 90695540 -159992314 - L1MB2 LINE L1 -3 6168 5934 3033 118 16 36 chr2 90695540 90696156 -159991698 - MER4E LTR ERV1 0 766 2 2775 137 26 42 chr2 90696156 90696302 -159991552 - L1MB2 LINE L1 -245 5938 5791 2433 156 14 105 chr2 90696302 90696511 -159991343 + MLT2B1 LTR ERVL 2 228 -292 2493 58 0 7 chr2 90696511 90696803 -159991051 + AluY SINE Alu 1 290 -21 2433 156 14 105 chr2 90696803 90697162 -159990692 + MLT2B1 LTR ERVL 228 518 -2 2775 137 26 42 chr2 90697162 90697520 -159990334 - L1MB2 LINE L1 -392 5791 5442 945 178 0 0 chr2 90697624 90697781 -159990073 + FAM SINE Alu 1 157 -18 219 36 0 0 chr2 90697783 90697811 -159990043 + (CCAA)n Simple_repeat Simple_repeat 2 29 0 491 260 32 5 chr2 90698514 90698706 -159989148 + MIR SINE MIR 40 242 -20 1809 176 24 42 chr2 90698722 90699103 -159988751 + MSTD LTR MaLR 1 374 -22 2259 103 0 0 chr2 90699570 90699861 -159987993 - AluSx SINE Alu -21 291 1 1944 116 28 18 chr2 90701911 90702215 -159985639 + AluSx SINE Alu 1 312 0 198 0 0 0 chr2 90703630 90703652 -159984202 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 244 300 0 0 chr2 90703809 90703869 -159983985 - L2 LINE L2 -11 3261 3202 1103 310 98 29 chr2 90704508 90705461 -159982393 + L2 LINE L2 2290 3312 -1 702 199 7 7 chr2 90706200 90706346 -159981508 + LTR37B LTR ERV1 7 152 -316 521 29 0 15 chr2 90706415 90706483 -159981371 + (TTCCC)n Simple_repeat Simple_repeat 4 70 0 864 114 0 0 chr2 90706605 90706719 -159981135 - AluSq/x SINE Alu -198 114 1 23 0 0 0 chr2 90706794 90706817 -159981037 + AT_rich Low_complexity Low_complexity 1 23 0 4305 168 39 51 chr2 90707226 90707289 -159980565 - L1MB4 LINE L1 0 6180 6118 2238 88 11 0 chr2 90707289 90707574 -159980280 - AluSx SINE Alu -24 288 1 4305 168 39 51 chr2 90707574 90708505 -159979349 - L1MB4 LINE L1 -62 6118 5200 36 23 0 0 chr2 90708614 90708657 -159979197 + AT_rich Low_complexity Low_complexity 1 43 0 1777 128 0 4 chr2 90708724 90708975 -159978879 - AluJb SINE Alu -3 309 60 2669 204 96 18 chr2 90709327 90709556 -159978298 + L1ME1 LINE L1 5431 5641 -525 2321 86 27 0 chr2 90709556 90709857 -159977997 + AluSc SINE Alu 1 309 0 2669 204 96 18 chr2 90709857 90710295 -159977559 + L1ME1 LINE L1 5641 6150 -16 1832 163 0 36 chr2 90710319 90710626 -159977228 + AluJo SINE Alu 1 296 -16 1014 195 138 14 chr2 90710979 90711189 -159976665 - MER8 DNA MER2_type -3 236 1 826 243 107 80 chr2 90712741 90713190 -159974664 - L1ME3 LINE L1 -204 5962 5499 2622 41 0 25 chr2 90713190 90713509 -159974345 + AluY SINE Alu 1 311 0 826 243 107 80 chr2 90713509 90713772 -159974082 - L1ME3 LINE L1 -667 5499 5244 791 76 0 9 chr2 90714750 90714855 -159972999 - AluSq/x SINE Alu -208 105 2 590 245 175 20 chr2 90716060 90716300 -159971554 + MIR SINE MIR 5 262 0 734 187 29 23 chr2 90716310 90716481 -159971373 + MER104 DNA Tc2 7 178 -2 22 80 0 0 chr2 90717959 90718009 -159969845 + AT_rich Low_complexity Low_complexity 1 50 0 35 71 0 0 chr2 90718160 90718230 -159969624 + AT_rich Low_complexity Low_complexity 1 70 0 371 265 235 8 chr2 90718319 90718553 -159969301 - L1ME LINE L1 -299 5822 5536 419 301 18 72 chr2 90720194 90720360 -159967494 + L2 LINE L2 2602 2758 -556 180 0 0 0 chr2 90720363 90720383 -159967471 + (T)n Simple_repeat Simple_repeat 1 20 0 1339 228 114 12 chr2 90720386 90720778 -159967076 - LTR28 LTR ERV1 -197 439 1 1946 100 30 36 chr2 90720778 90721079 -159966775 - LTR28-int LTR ERV1 0 7091 6793 259 239 28 14 chr2 90721113 90721184 -159966670 - HUERS-P3 LTR ERV1 -668 8251 8180 11423 238 25 37 chr2 90721236 90724011 -159963843 - HUERS-P3 LTR ERV1 -2858 4233 1492 274 330 28 18 chr2 90724025 90724134 -159963720 - HUERS-P3 LTR ERV1 -5928 1163 1054 1133 204 55 5 chr2 90724329 90724549 -159963305 - HUERS-P3 LTR ERV1 -6663 428 198 2246 130 0 0 chr2 90724621 90724929 -159962925 - AluSx SINE Alu -4 308 1 3408 155 24 62 chr2 90725051 90725748 -159962106 - L1MB7 LINE L1 -25 6159 5489 481 230 101 6 chr2 90725745 90725923 -159961931 - L1MB7 LINE L1 -1168 4978 4784 * 23 54 0 0 chr2 90726140 90726177 -159961677 + AT_rich Low_complexity Low_complexity 1 37 0 358 346 0 10 chr2 90726179 90726283 -159961571 + L2 LINE L2 3138 3240 -32 2264 101 3 0 chr2 90730132 90730430 -159957424 - AluSg SINE Alu -11 299 1 266 171 71 34 chr2 90730653 90730724 -159957130 - L1MC/D LINE L1 -577 5587 5514 189 0 0 0 chr2 90730734 90730755 -159957099 + (T)n Simple_repeat Simple_repeat 1 21 0 276 190 190 0 chr2 90730774 90730874 -159956980 + L1M4 LINE L1 3087 3205 -2941 695 303 79 30 chr2 90731228 90731791 -159956063 + L2 LINE L2 2452 3049 -223 243 311 19 19 chr2 90731865 90731968 -159955886 - MLT1L LTR MaLR -8 607 505 1047 135 47 62 chr2 90732364 90732556 -159955298 + MER5A DNA MER1_type 1 189 0 352 270 42 74 chr2 90732676 90732865 -159954989 + L2 LINE L2 3122 3304 -9 24 32 0 0 chr2 90733478 90733509 -159954345 + AT_rich Low_complexity Low_complexity 1 31 0 342 406 20 10 chr2 90733829 90734026 -159953828 + L1MEc LINE L1 384 582 -6025 566 268 137 34 chr2 90734477 90735056 -159952798 + L1MEc LINE L1 815 1629 -4797 252 0 0 0 chr2 90735186 90735214 -159952640 + (TA)n Simple_repeat Simple_repeat 1 28 0 1265 170 39 30 chr2 90735298 90735434 -159952420 + MER46A DNA MER2_type 1 141 -2590 2406 72 3 7 chr2 90735434 90735740 -159952114 + AluY SINE Alu 1 305 -6 1265 170 39 30 chr2 90735740 90735833 -159952021 + MER46A DNA MER2_type 141 232 -4 1577 222 35 27 chr2 90736668 90737038 -159950816 + MLT1A2 LTR MaLR 1 373 -1 192 290 75 9 chr2 90739331 90739438 -159948416 - MIR3 SINE MIR -12 196 83 1603 171 10 38 chr2 90739815 90740107 -159947747 - AluJo SINE Alu -28 284 1 30 45 0 0 chr2 90740107 90740151 -159947703 + AT_rich Low_complexity Low_complexity 1 44 0 331 268 0 0 chr2 90740383 90740465 -159947389 + L1MC4 LINE L1 6614 6695 -1347 1241 129 0 0 chr2 90740465 90740635 -159947219 + AluSg/x SINE Alu 123 292 -18 245 179 0 0 chr2 90741591 90741630 -159946224 + LTR65 LTR ERV1 1 39 -630 2932 123 30 26 chr2 90741633 90742131 -159945723 - L1P4 LINE L1 -392 5774 5275 1034 121 6 6 chr2 90742194 90742351 -159945503 - LTR2 LTR ERV1 -26 423 267 1263 198 0 1 chr2 90742463 90742770 -159945084 - Harlequin LTR ERV1 -1 6895 6559 776 117 0 0 chr2 90742773 90742884 -159944970 - Harlequin LTR ERV1 -2073 5740 5630 226 291 0 0 chr2 90742884 90742939 -159944915 - LTR2 LTR ERV1 -55 394 340 9191 156 24 36 chr2 90742940 90744593 -159943261 - HERVE LTR ERV1 -6179 1634 1 628 173 0 9 chr2 90744593 90744703 -159943151 - LTR2B LTR ERV1 0 490 382 337 287 139 9 chr2 90745078 90745193 -159942661 + L2 LINE L2 3143 3272 0 889 158 11 0 chr2 90745196 90745373 -159942481 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 1677 234 62 53 chr2 90746475 90748148 -159939706 + L1MD2 LINE L1 3139 5024 -1122 2051 125 0 17 chr2 90748148 90748475 -159939379 + AluSx SINE Alu 1 322 0 1677 234 62 53 chr2 90748475 90748669 -159939185 + L1MD2 LINE L1 5024 5215 -931 1603 225 105 41 chr2 90748670 90749203 -159938651 - MLT1E3 LTR MaLR 0 624 58 2443 190 53 26 chr2 90749233 90749412 -159938442 + L1MD2 LINE L1 5208 5381 -978 2390 146 95 3 chr2 90749412 90749802 -159938052 + MSTB LTR MaLR 1 426 0 2443 190 53 26 chr2 90749802 90750203 -159937651 + L1MD2 LINE L1 5381 5798 -561 2021 96 27 109 chr2 90750203 90750569 -159937285 - MLT2D LTR ERVL 0 414 79 1120 97 0 7 chr2 90750570 90750715 -159937139 + AluYa5 SINE Alu 1 144 -167 2370 68 14 3 chr2 90750716 90751011 -159936843 + AluY SINE Alu 1 298 -13 547 159 0 0 chr2 90751011 90751099 -159936755 - MLT2D LTR ERVL -325 89 2 1867 181 149 79 chr2 90751099 90751218 -159936636 + L1MD2 LINE L1 5793 5902 -457 2073 128 0 17 chr2 90751218 90751516 -159936338 + AluSx SINE Alu 1 293 -19 1867 181 149 79 chr2 90751516 90751926 -159935928 + L1MD2 LINE L1 5902 6359 0 26 30 0 0 chr2 90752432 90752465 -159935389 + AT_rich Low_complexity Low_complexity 1 33 0 446 224 43 9 chr2 90753020 90753136 -159934718 - L1ME4a LINE L1 -204 5917 5798 279 0 0 0 chr2 90753321 90753352 -159934502 + (CA)n Simple_repeat Simple_repeat 2 32 0 1538 121 213 4 chr2 90753587 90753858 -159933996 + AluYa5 SINE Alu 1 301 0 2271 95 3 7 chr2 90754035 90754340 -159933514 + AluSx SINE Alu 1 304 -8 199 267 0 0 chr2 90754426 90754471 -159933383 - MIR SINE MIR -14 248 204 2151 136 0 0 chr2 90754712 90755020 -159932834 - AluSx SINE Alu -4 308 1 796 245 113 91 chr2 90755109 90755580 -159932274 + MLT1G LTR MaLR 1 480 -115 579 221 28 7 chr2 90755593 90755738 -159932116 + MER69 DNA AcHobo 1896 2043 -483 254 95 24 0 chr2 90756062 90756104 -159931750 + (GA)n Simple_repeat Simple_repeat 1 43 0 2177 127 0 9 chr2 90756981 90757296 -159930558 + AluJo SINE Alu 1 312 0 187 362 0 14 chr2 90757442 90757511 -159930343 + L2 LINE L2 3204 3271 -1 37 23 0 0 chr2 90758715 90758759 -159929095 + AT_rich Low_complexity Low_complexity 1 44 0 1795 152 30 14 chr2 90758764 90759060 -159928794 + AluJb SINE Alu 1 301 -11 2270 108 3 0 chr2 90761294 90761590 -159926264 - AluSx SINE Alu -15 297 1 1274 265 53 28 chr2 90762724 90763233 -159924621 + L1ME4a LINE L1 5551 6072 -49 346 230 105 26 chr2 90765157 90765309 -159922545 + MER103 DNA DNA 2 165 -1 253 33 0 0 chr2 90765514 90765544 -159922310 + LTR8A LTR ERV1 1 30 -697 1578 230 122 4 chr2 90766279 90766762 -159921092 + L1MD2 LINE L1 5811 6350 -9 * 2813 224 50 31 chr2 90766757 90767597 -159920257 + L1MB7 LINE L1 5316 6171 -13 183 156 0 0 chr2 90767606 90767638 -159920216 + A-rich Low_complexity Low_complexity 1 32 0 2483 71 0 7 chr2 90767860 90768168 -159919686 + AluY SINE Alu 1 306 -5 2191 66 44 0 chr2 90768582 90768881 -159918973 + AluSp SINE Alu 1 311 0 1823 182 0 16 chr2 90769397 90769704 -159918150 + AluJb SINE Alu 1 302 -10 208 311 143 26 chr2 90769749 90770176 -159917678 + L2 LINE L2 1699 2175 -1139 1885 153 11 0 chr2 90770464 90770751 -159917103 - AluSx SINE Alu -17 295 6 2124 122 17 0 chr2 90771297 90771585 -159916269 - AluSx SINE Alu -19 293 1 2312 75 16 29 chr2 90772608 90772914 -159914940 + AluY SINE Alu 1 302 -9 466 190 0 0 chr2 90773427 90773506 -159914348 + AluJ/FLAM SINE Alu 2 80 -232 487 148 0 34 chr2 90873506 90873594 -159814260 - MER76 LTR ERV -603 85 1 3584 174 99 23 chr2 90873689 90874474 -159813380 + MER21A LTR ERV1 24 925 -6 357 198 0 0 chr2 90874613 90874704 -159813150 + CT-rich Low_complexity Low_complexity 3 93 0 23 0 0 0 chr2 90874704 90874727 -159813127 + AT_rich Low_complexity Low_complexity 1 23 0 1927 144 0 0 chr2 90874728 90875012 -159812842 - AluSx SINE Alu -28 284 1 255 281 18 42 chr2 90875461 90875567 -159812287 - MIR SINE MIR -61 147 60 183 294 0 44 chr2 90875613 90875681 -159812173 + MIR SINE MIR 74 138 -124 1024 231 154 25 chr2 90877477 90878405 -159809449 - Zaphod DNA AcHobo 0 4031 2966 7568 237 59 36 chr2 90878437 90879634 -159808220 + L1MD3 LINE L1 14 1182 -5358 2346 34 41 3 chr2 90879634 90879925 -159807929 + AluY SINE Alu 1 302 -9 7568 237 59 36 chr2 90879925 90880542 -159807312 + L1MD3 LINE L1 1182 1891 -4649 189 0 0 0 chr2 90880542 90880563 -159807291 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 7568 237 59 36 chr2 90880563 90880982 -159806872 + L1MD3 LINE L1 1891 2299 -4241 1093 235 58 19 chr2 90881192 90881554 -159806300 - L1ME3A LINE L1 -9 6161 5786 1859 242 31 29 chr2 90881722 90882375 -159805479 + L1MD3 LINE L1 2850 3503 -3037 5822 240 71 19 chr2 90882392 90884757 -159803097 + L1MD3 LINE L1 3945 5797 -743 2184 204 49 26 chr2 90884309 90884883 -159802971 + L1MB7 LINE L1 5990 6576 -2 * 197 189 19 38 chr2 90885209 90885262 -159802592 + MIR SINE MIR 97 148 -114 246 325 48 48 chr2 90885339 90885465 -159802389 - MIR SINE MIR -80 182 57 331 95 63 0 chr2 90885640 90885703 -159802151 + CT-rich Low_complexity Low_complexity 3 69 0 36 0 0 0 chr2 90886554 90886590 -159801264 + AT_rich Low_complexity Low_complexity 1 36 0 622 317 65 46 chr2 90886656 90886882 -159800972 - HsTC2 DNA Tc2 -1007 891 671 1637 185 10 7 chr2 90886882 90887184 -159800670 - AluJo SINE Alu -9 303 1 622 317 65 46 chr2 90887184 90887496 -159800358 - HsTC2 DNA Tc2 -1227 671 343 2521 96 103 5 chr2 90887511 90887919 -159799935 + LTR7 LTR ERV1 1 448 -2 13293 107 62 38 chr2 90887921 90889182 -159798672 + HERVH LTR ERV1 1 1230 -6483 183 284 119 28 chr2 90889182 90889291 -159798563 + L2 LINE L2 2433 2551 -763 13293 107 62 38 chr2 90889291 90890756 -159797098 + HERVH LTR ERV1 1230 2987 -4726 873 149 20 0 chr2 90890750 90890898 -159796956 + HERVH LTR ERV1 3140 3290 -4423 * 3236 122 10 6 chr2 90890888 90891388 -159796466 + HERVH LTR ERV1 3492 3993 -3720 4351 129 22 1 chr2 90891390 90892039 -159795815 + HERVH LTR ERV1 4488 5149 -2564 1398 118 18 9 chr2 90892036 90892257 -159795597 + HERVH LTR ERV1 5597 5819 -1894 * 2366 93 48 13 chr2 90892259 90892634 -159795220 + HERVH LTR ERV1 7326 7713 0 2575 85 97 7 chr2 90892634 90893045 -159794809 + LTR7 LTR ERV1 1 448 -2 1690 204 45 6 chr2 90894255 90894692 -159793162 - MER89 LTR ERV1 -5 554 1 227 250 18 0 chr2 90895253 90895309 -159792545 - MER58 DNA MER1_type -117 98 42 1244 268 24 73 chr2 90895324 90895805 -159792049 - MER110 LTR ERV1 -12 479 23 2014 108 9 51 chr2 90895805 90896121 -159791733 + AluSg SINE Alu 1 303 -7 1244 268 24 73 chr2 90896121 90896143 -159791711 - MER110 LTR ERV1 -468 23 1 38 39 0 0 chr2 90897150 90897202 -159790652 + AT_rich Low_complexity Low_complexity 1 52 0 247 196 38 0 chr2 90897220 90897353 -159790501 + (TA)n Simple_repeat Simple_repeat 2 139 0 252 74 37 49 chr2 90897368 90897449 -159790405 + (TATAA)n Simple_repeat Simple_repeat 4 83 0 21 0 0 0 chr2 90897449 90897470 -159790384 + AT_rich Low_complexity Low_complexity 1 21 0 10733 172 101 23 chr2 90898290 90898743 -159789111 - L1M4 LINE L1 -3558 2824 2408 1933 133 3 16 chr2 90898743 90899052 -159788802 - AluSq SINE Alu -8 305 1 10733 172 101 23 chr2 90899052 90901229 -159786625 - L1M4 LINE L1 -3974 2408 18 365 231 127 33 chr2 90901427 90901639 -159786215 + L1MDa LINE L1 1866 2097 -4443 197 65 32 0 chr2 90901683 90901714 -159786140 + (TAGA)n Simple_repeat Simple_repeat 2 33 0 278 269 95 28 chr2 90901920 90902173 -159785681 + L1MDa LINE L1 2460 2729 -3992 192 40 0 0 chr2 90902757 90902782 -159785072 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 316 283 96 23 chr2 90902861 90903038 -159784816 + L1MDa LINE L1 2783 2972 -3568 8999 198 26 29 chr2 90903084 90906230 -159781624 + L1MA9 LINE L1 3179 6312 0 588 264 56 56 chr2 90906542 90906994 -159780860 + L1MDa LINE L1 4318 4772 -1768 1664 189 7 7 chr2 90906994 90907300 -159780554 + AluJo SINE Alu 1 306 -6 588 264 56 56 chr2 90907300 90907332 -159780522 + L1MDa LINE L1 4771 4802 -1738 427 237 28 13 chr2 90907390 90907543 -159780311 + L1MDa LINE L1 5221 5378 -1162 284 77 0 0 chr2 90907545 90907584 -159780270 - L1P LINE L1 -1875 4271 4233 207 0 0 0 chr2 90907584 90907607 -159780247 + (T)n Simple_repeat Simple_repeat 1 23 0 28276 31 15 1 chr2 90907669 90913699 -159774155 - L1PA2 LINE L1 -2 6153 1 10667 139 12 2 chr2 90913706 90915462 -159772392 - L1PA10 LINE L1 -1899 4247 2473 6084 144 20 0 chr2 90915462 90917325 -159770529 + L1PA10 LINE L1 4271 6168 0 1322 297 73 30 chr2 90917341 90918457 -159769397 + L1MDa LINE L1 5390 6560 -4 3353 125 4 20 chr2 90918646 90919000 -159768854 + LOR1a LTR ERV1 1 346 -151 3098 110 13 22 chr2 90919000 90919455 -159768399 - MLT2A2 LTR ERVL 0 453 3 3353 125 4 20 chr2 90919455 90919605 -159768249 + LOR1a LTR ERV1 346 497 0 366 228 147 7 chr2 90920034 90920170 -159767684 + L1MA10 LINE L1 4960 5114 -1032 2175 125 7 0 chr2 90920170 90920473 -159767381 + AluSx SINE Alu 7 311 -1 2939 218 73 22 chr2 90920473 90921267 -159766587 + L1MA5 LINE L1 1407 2498 -4711 4929 186 18 21 chr2 90921271 90922857 -159764997 + L1MA5 LINE L1 5410 7000 -362 1651 196 0 14 chr2 90922857 90923143 -159764711 + AluJb SINE Alu 1 282 -30 189 107 0 0 chr2 90923146 90923174 -159764680 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 4929 186 18 21 chr2 90923174 90923542 -159764312 + L1MA5 LINE L1 7002 7362 0 4591 187 17 47 chr2 90923551 90924801 -159763053 + L1MA10 LINE L1 5108 6320 -14 280 317 30 30 chr2 90926215 90926316 -159761538 + L2 LINE L2 3191 3291 -22 258 299 91 58 chr2 90929278 90929519 -159758335 + L2 LINE L2 2607 2855 -459 213 362 0 14 chr2 90929685 90929754 -159758100 + L2 LINE L2 3155 3222 -50 22 0 0 0 chr2 90930151 90930173 -159757681 + AT_rich Low_complexity Low_complexity 1 22 0 184 120 40 0 chr2 90930264 90930314 -159757540 + A-rich Low_complexity Low_complexity 2 53 0 11530 137 31 14 chr2 90930429 90932352 -159755502 - Tigger1 DNA MER2_type 0 2418 464 791 181 67 0 chr2 90932349 90932498 -159755356 - Tigger1 DNA MER2_type -2056 362 204 * 2967 75 124 151 chr2 90932501 90933171 -159754683 - pTR5 LTR ERV1 0 2438 1787 22 0 0 0 chr2 90934389 90934411 -159753443 + AT_rich Low_complexity Low_complexity 1 22 0 1534 221 41 39 chr2 90934462 90934758 -159753096 - MLT1B LTR MaLR 0 390 91 699 203 0 8 chr2 90934758 90934886 -159752968 + FLAM_C SINE Alu 2 128 -5 1534 221 41 39 chr2 90934886 90934978 -159752876 - MLT1B LTR MaLR -299 91 1 2564 36 0 16 chr2 90935045 90935351 -159752503 + AluY SINE Alu 1 301 -10 196 340 82 41 chr2 90935674 90935821 -159752033 - MIR SINE MIR -66 196 44 25 51 0 0 chr2 90935878 90935917 -159751937 + AT_rich Low_complexity Low_complexity 1 39 0 198 0 0 0 chr2 90938132 90938154 -159749700 + (T)n Simple_repeat Simple_repeat 1 22 0 402 311 102 54 chr2 90939216 90939608 -159748246 + MLT1H LTR MaLR 1 411 -138 595 173 99 7 chr2 90939661 90939865 -159747989 + MER74C LTR ERVL 3 260 -200 2652 99 11 11 chr2 90940092 90940467 -159747387 + THE1C LTR MaLR 1 375 0 9350 126 45 38 chr2 90940467 90942036 -159745818 + THE1C-int LTR MaLR 1 1580 0 2598 114 3 11 chr2 90942036 90942414 -159745440 + THE1C LTR MaLR 1 375 0 1705 104 12 12 chr2 90943049 90943300 -159744554 - L1PA7 LINE L1 -4 6150 5900 3243 88 2 0 chr2 90943300 90943734 -159744120 + L1P3 LINE L1 5357 5791 -363 1462 184 21 31 chr2 90943734 90944022 -159743832 - AluJo SINE Alu -27 285 1 593 358 16 10 chr2 90944477 90944730 -159743124 + MIR SINE MIR 2 253 -9 274 289 237 31 chr2 90945527 90945755 -159742099 + L3 LINE CR1 1197 1471 -106 208 365 52 0 chr2 90945891 90946006 -159741848 - L2 LINE L2 -570 2744 2624 230 349 24 0 chr2 90946480 90946563 -159741291 - MIR SINE MIR -16 246 162 301 382 15 7 chr2 90947317 90947453 -159740401 - MIR3 SINE MIR -49 159 23 21 0 0 0 chr2 90948960 90948981 -159738873 + AT_rich Low_complexity Low_complexity 1 21 0 378 0 0 0 chr2 90950002 90950044 -159737810 + (CA)n Simple_repeat Simple_repeat 2 43 0 388 330 19 24 chr2 90950221 90950427 -159737427 - MLT1K LTR MaLR -5 583 379 518 339 26 0 chr2 90951341 90951530 -159736324 - HERV16 LTR ERVL -3576 1420 1227 415 320 83 0 chr2 90952417 90952573 -159735281 - HERV16 LTR ERVL -4827 169 1 197 122 49 0 chr2 90953092 90953133 -159734721 + T-rich Low_complexity Low_complexity 2 44 0 312 27 0 0 chr2 90953171 90953248 -159734606 + (TG)n Simple_repeat Simple_repeat 1 114 0 312 27 0 0 chr2 90953248 90953285 -159734569 + (TG)n Simple_repeat Simple_repeat 2 38 0 6818 201 32 1 chr2 90953447 90954928 -159732926 + L1MA1 LINE L1 2519 4045 -2101 6548 131 27 3 chr2 90954934 90956534 -159731320 + L1MA1 LINE L1 4666 6301 -1 210 329 0 0 chr2 90956665 90956735 -159731119 - MIR SINE MIR -121 141 72 22 35 0 0 chr2 90957566 90957595 -159730259 + AT_rich Low_complexity Low_complexity 1 29 0 2001 201 57 8 chr2 90957606 90958150 -159729704 - L1MB5 LINE L1 -33 6141 5542 621 286 6 0 chr2 90958317 90958488 -159729366 + MER58A DNA MER1_type 42 213 -11 791 293 67 15 chr2 90958501 90958771 -159729083 - MLT1J LTR MaLR -162 349 66 1102 267 49 58 chr2 90959583 90960130 -159727724 - L2 LINE L2 -15 3298 2753 454 319 43 22 chr2 90960376 90960561 -159727293 - MIR SINE MIR -15 247 59 240 286 57 29 chr2 90961034 90961104 -159726750 - MIR3 SINE MIR -24 184 113 327 254 156 0 chr2 90962116 90962238 -159725616 + MER104 DNA Tc2 38 178 -2 2352 85 0 0 chr2 90964886 90965191 -159722663 + AluY SINE Alu 1 305 -6 483 169 0 0 chr2 90965226 90965315 -159722539 + L1PB1 LINE L1 6063 6151 0 207 0 0 0 chr2 90965358 90965381 -159722473 + (A)n Simple_repeat Simple_repeat 1 23 0 1154 183 45 130 chr2 90965564 90965963 -159721891 + MLT1A1 LTR MaLR 1 365 0 512 269 140 16 chr2 90966195 90966452 -159721402 + L2 LINE L2 3023 3311 -2 233 282 24 12 chr2 90966915 90967000 -159720854 + L1ME2 LINE L1 4 89 -5981 2225 98 3 3 chr2 90967232 90967527 -159720327 - AluSq SINE Alu -18 295 1 5513 175 24 12 chr2 90967935 90969477 -159718377 + L1MA5 LINE L1 4735 6300 0 260 49 49 0 chr2 90969666 90969707 -159718147 + (CAAG)n Simple_repeat Simple_repeat 2 44 0 1375 261 92 44 chr2 90969778 90970734 -159717120 + HAL1 LINE L1 913 1914 -593 378 306 77 75 chr2 90971285 90971726 -159716128 + L1ME2 LINE L1 3770 4211 -1869 2247 84 0 3 chr2 90971736 90972035 -159715819 + AluY SINE Alu 1 298 -13 240 293 54 75 chr2 90972145 90972425 -159715429 + L1ME2 LINE L1 4365 4638 -1442 338 295 174 16 chr2 90972578 90972768 -159715086 + L1ME2 LINE L1 5644 5863 -235 5379 145 21 22 chr2 90972978 90975123 -159712731 + L1PA13 LINE L1 3230 5480 -683 2253 92 0 0 chr2 90975123 90975407 -159712447 - AluSc SINE Alu -25 284 1 5379 145 21 22 chr2 90975407 90976087 -159711767 + L1PA13 LINE L1 5480 6159 -4 28 61 0 0 chr2 90976144 90976193 -159711661 + AT_rich Low_complexity Low_complexity 1 49 0 2192 109 3 0 chr2 90976861 90977155 -159710699 + AluSg SINE Alu 11 305 -5 193 310 0 17 chr2 90977963 90978021 -159709833 + L2 LINE L2 3241 3297 -16 420 210 287 5 chr2 90978697 90978892 -159708962 + MIR SINE MIR 13 262 0 219 36 0 0 chr2 90981153 90981181 -159706673 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 22 56 0 0 chr2 90981498 90981534 -159706320 + AT_rich Low_complexity Low_complexity 1 36 0 252 269 25 17 chr2 90981539 90981658 -159706196 + L1M4 LINE L1 2915 3034 -3112 191 88 29 0 chr2 90981735 90981769 -159706085 + (TA)n Simple_repeat Simple_repeat 1 35 0 371 317 27 16 chr2 90982203 90982389 -159705465 + L1M4 LINE L1 5183 5370 -776 324 324 158 7 chr2 90982791 90983075 -159704779 + L1M4 LINE L1 3638 3964 -2182 200 239 22 11 chr2 90983093 90983185 -159704669 + (TA)n Simple_repeat Simple_repeat 2 94 0 * 223 186 51 0 chr2 90983130 90983189 -159704665 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 490 246 149 31 chr2 90983194 90983389 -159704465 - MER58A DNA MER1_type -6 218 1 1613 201 22 32 chr2 90983478 90983847 -159704007 - MLT1A1 LTR MaLR 0 365 1 2228 209 83 26 chr2 90983853 90984513 -159703341 - MLT1A1-int LTR MaLR -6 1729 689 225 0 0 0 chr2 90984615 90984640 -159703214 + (TG)n Simple_repeat Simple_repeat 2 26 0 263 316 42 11 chr2 90984649 90984744 -159703110 - L1MEd LINE L1 -5433 686 589 750 235 5 42 chr2 90985237 90985450 -159702404 - MER3 DNA MER1_type 0 209 5 977 247 23 0 chr2 90985704 90985923 -159701931 - MER58A DNA MER1_type 0 224 1 990 252 91 37 chr2 90986219 90986703 -159701151 + LTR1B LTR ERV1 22 531 -295 1990 112 3 7 chr2 90987160 90987455 -159700399 + AluSc SINE Alu 1 294 -15 2117 123 3 0 chr2 90987574 90987875 -159699979 + AluSx SINE Alu 1 302 -10 390 264 8 16 chr2 90988599 90988724 -159699130 + Charlie7 DNA MER1_type 7 130 -2482 21 95 0 0 chr2 90988751 90988814 -159699040 + AT_rich Low_complexity Low_complexity 1 63 0 488 315 8 0 chr2 90988827 90988957 -159698897 + Charlie7 DNA MER1_type 130 260 -2352 2558 52 0 3 chr2 90989323 90989631 -159698223 - AluY SINE Alu -3 308 2 258 264 0 0 chr2 90990418 90990471 -159697383 + MLT1G1 LTR MaLR 3 55 -540 2101 200 37 30 chr2 90990475 90990936 -159696918 + MLT1C LTR MaLR 4 467 0 242 377 48 0 chr2 90991927 90992073 -159695781 - MER117 DNA MER1_type -44 153 1 21 0 0 0 chr2 90992239 90992260 -159695594 + AT_rich Low_complexity Low_complexity 1 21 0 575 173 64 71 chr2 90992576 90992751 -159695103 - MLT1F LTR MaLR -2 540 386 263 140 200 0 chr2 90992735 90992785 -159695069 - MLT1F LTR MaLR -298 269 210 * 369 197 0 0 chr2 90992791 90992852 -159695002 + MER5A DNA MER1_type 129 189 0 1620 167 33 7 chr2 90995351 90995656 -159692198 + L1PB4 LINE L1 5831 6143 -13 1570 143 175 10 chr2 90995835 90996149 -159691705 + MER47A DNA MER2_type 1 366 0 2138 127 0 0 chr2 90997657 90997956 -159689898 + AluSq SINE Alu 1 299 -14 353 272 179 12 chr2 90998002 90998164 -159689690 - MER5A DNA MER1_type 0 189 1 332 299 32 59 chr2 90998210 90998397 -159689457 + Charlie8 DNA MER1_type 79 260 -2157 188 21 21 83 chr2 90998827 90998875 -159688979 + (TTTTA)n Simple_repeat Simple_repeat 3 47 0 1252 146 25 76 chr2 90998889 90999206 -159688648 - L1MA3 LINE L1 -28 6277 5926 773 268 66 7 chr2 90999300 90999572 -159688282 - L1ME2 LINE L1 -164 6000 5713 28 29 0 0 chr2 90999818 90999853 -159688001 + AT_rich Low_complexity Low_complexity 1 35 0 576 155 0 0 chr2 90999880 90999983 -159687871 - MER2 DNA MER2_type -139 206 104 21 82 0 0 chr2 91000051 91000100 -159687754 + AT_rich Low_complexity Low_complexity 1 49 0 1016 211 5 0 chr2 91000116 91000320 -159687534 - MER2 DNA MER2_type -139 206 2 554 266 125 61 chr2 91001574 91001972 -159685882 - MLT1F LTR MaLR -2 553 153 1314 223 124 31 chr2 91001972 91002390 -159685464 - MLT1C LTR MaLR 0 467 11 494 328 28 6 chr2 91002410 91002590 -159685264 - MLT1F LTR MaLR -411 184 1 327 225 0 14 chr2 91003505 91003576 -159684278 + MLT1C LTR MaLR 398 467 0 968 292 63 30 chr2 91003576 91004379 -159683475 + L1MEc LINE L1 800 1588 -4627 251 400 49 16 chr2 91004412 91004597 -159683257 + L2 LINE L2 2831 3021 -292 1677 313 74 20 chr2 91004851 91005539 -159682315 - L2 LINE L2 -787 2527 1803 2196 101 0 3 chr2 91005550 91005846 -159682008 - AluSg SINE Alu -4 306 12 24 32 0 0 chr2 91005892 91005923 -159681931 + AT_rich Low_complexity Low_complexity 1 31 0 259 321 59 27 chr2 91006079 91006266 -159681588 - MLT1L LTR MaLR -2 613 421 452 345 100 24 chr2 91006533 91007286 -159680568 + L1MEc LINE L1 3165 3974 -2241 279 379 8 8 chr2 91007299 91007423 -159680431 - MIR SINE MIR -121 141 18 231 277 50 82 chr2 91009101 91009260 -159678594 + L2 LINE L2 1611 1764 -1550 1630 167 0 47 chr2 91009474 91009809 -159678045 + AluJb SINE Alu 1 321 0 189 325 26 61 chr2 91010243 91010357 -159677497 + L2 LINE L2 3188 3297 -16 203 254 0 51 chr2 91010430 91010489 -159677365 - MIR SINE MIR 0 262 207 1340 199 113 18 chr2 91010562 91010938 -159676916 + MSTB1 LTR MaLR 13 428 0 352 321 0 0 chr2 91011355 91011461 -159676393 + (CATTC)n Simple_repeat Simple_repeat 5 110 0 232 341 16 41 chr2 91012034 91012157 -159675697 - MIR3 SINE MIR -17 191 72 227 179 15 0 chr2 91012511 91012578 -159675276 + (CA)n Simple_repeat Simple_repeat 2 69 0 2051 186 105 20 chr2 91013061 91013519 -159674335 - MER21A LTR ERV1 -411 520 24 1535 214 85 26 chr2 91013613 91014000 -159673854 + MER76 LTR ERV 1 410 -278 304 263 40 0 chr2 91014459 91014535 -159673319 - L2 LINE L2 -262 3010 2932 343 260 31 31 chr2 91014681 91014808 -159673046 + L1M4 LINE L1 3073 3199 -2947 * 344 320 0 0 chr2 91014797 91014925 -159672929 + L1M4 LINE L1 3073 3200 -2946 22 0 0 0 chr2 91014925 91014947 -159672907 + AT_rich Low_complexity Low_complexity 1 22 0 985 234 73 45 chr2 91014955 91015336 -159672518 - L1PBb LINE L1 -5127 1723 1336 816 293 46 11 chr2 91015323 91015603 -159672251 - L1PBb LINE L1 -5287 1562 1273 * 2360 199 13 26 chr2 91015881 91016327 -159671527 - L1M3de LINE L1 -1068 5664 5225 2238 95 0 13 chr2 91016327 91016631 -159671223 + AluY SINE Alu 1 300 -11 2360 199 13 26 chr2 91016631 91016721 -159671133 - L1M3de LINE L1 -1507 5225 5135 2878 82 19 0 chr2 91016859 91017396 -159670458 - L1P3 LINE L1 -499 5655 5112 * 3046 117 39 0 chr2 91017390 91017853 -159670001 + L1P LINE L1 4570 5050 -1096 3635 170 39 30 chr2 91017874 91018060 -159669794 - L1PB4 LINE L1 -5 6151 5968 2540 141 26 2 chr2 91018060 91018478 -159669376 + MSTA LTR MaLR 1 428 0 3635 170 39 30 chr2 91018478 91019078 -159668776 - L1PB4 LINE L1 -188 5968 5358 186 293 10 10 chr2 91019180 91019279 -159668575 + G-rich Low_complexity Low_complexity 4 102 0 8591 121 13 2 chr2 91020388 91021658 -159666196 + HSMAR1 DNA Mariner 3 1285 -2 1943 156 0 0 chr2 91021785 91022086 -159665768 + AluSx SINE Alu 1 301 -11 264 172 40 30 chr2 91022166 91022265 -159665589 + (TTATA)n Simple_repeat Simple_repeat 5 104 0 275 340 96 0 chr2 91022374 91022468 -159665386 - L2 LINE L2 -6 3266 3164 1796 122 4 4 chr2 91022893 91023148 -159664706 + AluSq SINE Alu 33 287 -26 9680 242 19 20 chr2 91023251 91026483 -159661371 - L1PA15-16 LINE L1 -1465 5384 2153 1611 190 0 17 chr2 91026483 91026773 -159661081 - AluJb SINE Alu -23 289 5 9680 242 19 20 chr2 91026773 91027124 -159660730 - L1PA15-16 LINE L1 -4696 2153 1803 36 23 0 0 chr2 91027233 91027276 -159660578 + GC_rich Low_complexity Low_complexity 1 43 0 209 206 0 16 chr2 91027276 91027339 -159660515 + C-rich Low_complexity Low_complexity 5 66 0 6232 201 82 11 chr2 91027439 91029098 -159658756 - L1M3de LINE L1 -1594 5138 3363 1146 138 30 121 chr2 91029099 91029404 -159658450 + LTR12 LTR ERV1 1 277 -437 315 247 0 0 chr2 91029404 91029485 -159658369 + LTR30 LTR ERV1 544 624 -98 664 185 25 0 chr2 91029485 91029604 -159658250 + LTR12 LTR ERV1 359 480 -234 637 233 58 39 chr2 91029605 91029811 -159658043 - L1M3de LINE L1 -3367 3365 3156 1747 259 63 73 chr2 91029822 91031663 -159656191 - L1 LINE L1 -3735 2997 942 311 319 0 11 chr2 91031702 91031796 -159656058 - L1 LINE L1 -6292 361 269 363 267 11 11 chr2 91031800 91031890 -159655964 - L1 LINE L1 -6282 371 282 950 301 112 49 chr2 91031939 91032563 -159655291 - L1M3de LINE L1 -5559 1094 572 250 316 139 41 chr2 91033056 91033300 -159654554 + L3 LINE CR1 1092 1359 -218 811 169 17 6 chr2 91034141 91034313 -159653541 - L1MB4 LINE L1 -2 6178 6005 4249 228 64 44 chr2 91034320 91036034 -159651820 - L1MB4 LINE L1 -254 5920 4242 2160 139 98 3 chr2 91036034 91036423 -159651431 - MSTA LTR MaLR -2 426 1 4249 228 64 44 chr2 91036423 91036789 -159651065 - L1MB4 LINE L1 -1932 4242 3788 1914 83 91 0 chr2 91036789 91037054 -159650800 - AluSg SINE Alu -21 289 1 4249 228 64 44 chr2 91037054 91037156 -159650698 - L1MB4 LINE L1 -2386 3788 3690 553 127 32 8 chr2 91037345 91037471 -159650383 + GA-rich Low_complexity Low_complexity 1 129 0 411 198 16 99 chr2 91037471 91037592 -159650262 + MLT1E1 LTR MaLR 305 415 -239 632 228 96 42 chr2 91037755 91037775 -159650079 + L1MB8 LINE L1 1253 1270 -5585 180 111 0 0 chr2 91037775 91037802 -159650052 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 632 228 96 42 chr2 91037802 91038123 -159649731 + L1MB8 LINE L1 1270 1821 -5034 505 68 87 5 chr2 91038124 91038353 -159649501 + (TA)n Simple_repeat Simple_repeat 1 247 0 52 0 0 0 chr2 91038353 91038405 -159649449 + AT_rich Low_complexity Low_complexity 1 52 0 1137 250 32 55 chr2 91038405 91038629 -159649225 + L1MB8 LINE L1 1825 2052 -4905 1193 208 130 13 chr2 91038629 91038937 -159648917 + MER2 DNA MER2_type 1 344 0 1137 250 32 55 chr2 91038937 91039255 -159648599 + L1MB8 LINE L1 2052 2458 -4499 1152 169 5 0 chr2 91039485 91039680 -159648174 - Tigger1 DNA MER2_type -274 2144 1949 * 4407 163 50 0 chr2 91039676 91040472 -159647382 - Tigger1 DNA MER2_type -145 2273 1438 3106 190 58 0 chr2 91040466 91041056 -159646798 + Tigger1 DNA MER2_type 1781 2404 -14 * 469 181 9 9 chr2 91041056 91041161 -159646693 - L1MA4 LINE L1 -251 6049 5945 * 2141 248 52 13 chr2 91041158 91041856 -159645998 + L1MB8 LINE L1 4841 5565 -1392 1352 124 5 0 chr2 91041860 91042054 -159645800 + AluSq SINE Alu 1 195 -118 2648 233 56 19 chr2 91042069 91043372 -159644482 + L1MB8 LINE L1 5558 6909 -80 595 149 32 0 chr2 91044364 91044458 -159643396 - U6 snRNA snRNA -2 105 9 338 247 81 69 chr2 91045642 91045816 -159642038 - L1ME LINE L1 -418 5703 5528 21 0 0 0 chr2 91045852 91045873 -159641981 + AT_rich Low_complexity Low_complexity 1 21 0 182 250 33 17 chr2 91046803 91046863 -159640991 + L2 LINE L2 2924 2984 -329 400 313 141 12 chr2 91046986 91047235 -159640619 + L2 LINE L2 3008 3288 -25 189 268 0 0 chr2 91048005 91048046 -159639808 + L3 LINE CR1 1514 1554 -23 189 206 0 0 chr2 91048013 91048047 -159639807 + L3b LINE CR1 1528 1561 -22 1549 180 20 27 chr2 91048385 91048680 -159639174 - AluJb SINE Alu -17 295 3 28 61 0 0 chr2 91048801 91048850 -159639004 + AT_rich Low_complexity Low_complexity 1 49 0 469 126 45 0 chr2 91049374 91049485 -159638369 + (TA)n Simple_repeat Simple_repeat 1 116 0 1256 164 30 164 chr2 91049485 91049567 -159638287 - MER2 DNA MER2_type 0 344 253 1687 185 0 3 chr2 91049567 91049859 -159637995 + AluSx SINE Alu 1 291 -21 1256 164 30 164 chr2 91049859 91050173 -159637681 - MER2 DNA MER2_type -91 253 1 403 308 26 45 chr2 91052220 91052376 -159635478 + MER5A DNA MER1_type 35 187 -2 35 24 0 0 chr2 91052488 91052530 -159635324 + AT_rich Low_complexity Low_complexity 1 42 0 24 67 0 0 chr2 91053221 91053266 -159634588 + AT_rich Low_complexity Low_complexity 1 45 0 265 142 45 37 chr2 91053931 91054065 -159633789 + (TTATA)n Simple_repeat Simple_repeat 2 136 0 186 194 0 0 chr2 91054431 91054462 -159633392 - L2 LINE L2 -10 3262 3232 1451 158 69 33 chr2 91054534 91054837 -159633017 - MER61A LTR ERV1 -29 314 1 186 43 0 0 chr2 91056178 91056201 -159631653 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 23 33 0 0 chr2 91056246 91056276 -159631578 + AT_rich Low_complexity Low_complexity 1 30 0 1731 169 7 14 chr2 91056467 91056763 -159631091 + AluJb SINE Alu 1 294 -18 339 226 0 0 chr2 91057037 91057099 -159630755 + L1MD2 LINE L1 -570 4294966787 -6793 1260 239 88 47 chr2 91057105 91057548 -159630306 + MLT1C LTR MaLR 7 467 0 2380 287 111 5 chr2 91057548 91058375 -159629479 + L1MD2 LINE L1 -513 401 -5883 246 287 57 33 chr2 91058939 91059061 -159628793 + L1MD2 LINE L1 545 669 -5715 3566 242 46 20 chr2 91059079 91060574 -159627280 + L1MD2 LINE L1 801 2351 -4033 3640 226 110 15 chr2 91060594 91061643 -159626211 + L1MD2 LINE L1 5443 6588 -7 231 33 33 0 chr2 91062495 91062525 -159625329 + THE1A LTR MaLR 1 31 -324 1804 174 35 32 chr2 91062581 91062955 -159624899 + THE1C LTR MaLR 1 375 0 441 239 138 0 chr2 91063673 91063782 -159624072 + MLT1D LTR MaLR 8 131 -374 32 67 0 0 chr2 91064071 91064131 -159623723 + AT_rich Low_complexity Low_complexity 1 60 0 181 255 0 21 chr2 91064558 91064605 -159623249 - L2 LINE L2 -655 2659 2614 1303 280 76 61 chr2 91065149 91065938 -159621916 - L1ME3A LINE L1 -51 6119 5319 * 1305 153 20 94 chr2 91065934 91066061 -159621793 - L1MC3 LINE L1 -1 7784 7649 2485 128 6 0 chr2 91066061 91066419 -159621435 + THE1B LTR MaLR 1 360 -4 1305 153 20 94 chr2 91066419 91066632 -159621222 - L1MC3 LINE L1 -136 7649 7469 22 0 0 0 chr2 91066633 91066655 -159621199 + AT_rich Low_complexity Low_complexity 1 22 0 543 73 12 0 chr2 91067100 91067182 -159620672 + L1MA3 LINE L1 6223 6305 0 24 53 0 0 chr2 91067182 91067220 -159620634 + AT_rich Low_complexity Low_complexity 1 38 0 3345 156 10 10 chr2 91067317 91067918 -159619936 - L1PA16 LINE L1 -6 6160 5560 1743 255 127 25 chr2 91068098 91068765 -159619089 - L1PA16 LINE L1 -815 5331 4597 9441 191 32 27 chr2 91068788 91069480 -159618374 + L1MA7 LINE L1 2934 3621 -2670 2120 165 8 6 chr2 91069480 91069843 -159618011 + THE1B LTR MaLR 1 364 0 9441 191 32 27 chr2 91069843 91072483 -159615371 + L1MA7 LINE L1 3621 6281 -10 2123 131 0 6 chr2 91072556 91072870 -159614984 + AluSx SINE Alu 1 312 0 31 26 0 0 chr2 91073065 91073103 -159614751 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 91073445 91073473 -159614381 + AT_rich Low_complexity Low_complexity 1 28 0 596 43 74 25 chr2 91073666 91073829 -159614025 + (TA)n Simple_repeat Simple_repeat 2 172 0 1413 214 0 24 chr2 91074105 91074424 -159613430 + AluJb SINE Alu 1 312 0 777 10 29 0 chr2 91074557 91074659 -159613195 + (TCTA)n Simple_repeat Simple_repeat 4 108 0 2192 62 4 0 chr2 91074894 91075168 -159612686 + AluY SINE Alu 16 290 -21 1603 293 44 36 chr2 91075416 91076028 -159611826 + L2 LINE L2 1885 2501 -813 480 277 69 13 chr2 91076031 91076190 -159611664 + MER91B DNA MER1_type 20 187 -3 309 358 40 20 chr2 91076192 91076343 -159611511 + L2 LINE L2 2714 2867 -447 885 9 26 0 chr2 91076456 91076570 -159611284 + (TCTA)n Simple_repeat Simple_repeat 4 120 0 342 250 203 31 chr2 91076703 91076831 -159611023 - MER5A DNA MER1_type -23 166 17 530 352 64 39 chr2 91076844 91077250 -159610604 + L2 LINE L2 2895 3310 -3 29 0 0 0 chr2 91077681 91077710 -159610144 + AT_rich Low_complexity Low_complexity 1 29 0 10540 161 17 16 chr2 91077735 91079633 -159608221 + Tigger1 DNA MER2_type 7 1906 -512 416 185 25 37 chr2 91079633 91079714 -159608140 - Tigger1 DNA MER2_type -1 2417 2338 235 295 45 45 chr2 91079720 91079832 -159608022 - MIR SINE MIR -47 215 104 184 287 138 64 chr2 91079851 91079945 -159607909 + MIR SINE MIR 148 248 -14 1834 161 134 8 chr2 91081116 91081496 -159606358 + MSTA LTR MaLR 1 428 0 8678 171 7 35 chr2 91081509 91083112 -159604742 + MSTA-int LTR MaLR 17 1574 -6 1280 167 118 34 chr2 91083117 91083481 -159604373 + MSTA LTR MaLR 1 428 0 318 227 0 0 chr2 91083665 91083731 -159604123 + MER94 DNA DNA 4 69 -65 399 21 0 0 chr2 91083967 91084015 -159603839 + (CA)n Simple_repeat Simple_repeat 1 48 0 21 36 0 0 chr2 91084188 91084216 -159603638 + AT_rich Low_complexity Low_complexity 1 28 0 2051 178 46 22 chr2 91084292 91084347 -159603507 - MSTB LTR MaLR 0 426 374 2223 58 3 10 chr2 91084347 91084638 -159603216 + L1PA8 LINE L1 5884 6172 0 2051 178 46 22 chr2 91084638 91084998 -159602856 - MSTB LTR MaLR -52 374 1 1143 166 8 30 chr2 91085490 91085725 -159602129 - THE1-int LTR MaLR -783 797 568 25 65 0 0 chr2 91086234 91086280 -159601574 + AT_rich Low_complexity Low_complexity 1 46 0 183 376 103 16 chr2 91086541 91086735 -159601119 - MIR SINE MIR -48 214 4 2247 64 10 3 chr2 91087017 91087314 -159600540 - AluY SINE Alu -12 299 1 26 30 0 0 chr2 91089143 91089176 -159598678 + AT_rich Low_complexity Low_complexity 1 33 0 870 148 22 6 chr2 91090543 91090725 -159597129 - L1MA7 LINE L1 -1 6290 6106 838 142 21 0 chr2 91090725 91090854 -159597000 + L1PA16 LINE L1 6021 6164 -2 726 170 12 64 chr2 91090859 91091030 -159596824 - L1MA7 LINE L1 -177 6114 5953 1628 89 38 0 chr2 91091030 91091266 -159596588 - L1PA7 LINE L1 0 6154 5910 1099 238 40 140 chr2 91091370 91092029 -159595825 - L1M4 LINE L1 -2678 3966 3435 1155 208 78 42 chr2 91092029 91092313 -159595541 - AluJo SINE Alu -6 296 3 1099 238 40 140 chr2 91092313 91092630 -159595224 - L1M4 LINE L1 -3209 3435 3088 2276 254 67 23 chr2 91092679 91093875 -159593979 - L1M4 LINE L1 -4536 2110 821 23 33 0 0 chr2 91093888 91093918 -159593936 + AT_rich Low_complexity Low_complexity 1 30 0 249 33 0 0 chr2 91094044 91094074 -159593780 + (TG)n Simple_repeat Simple_repeat 2 31 0 1609 168 65 7 chr2 91094108 91094418 -159593436 + THE1C LTR MaLR 48 375 0 426 254 8 16 chr2 91094668 91094794 -159593060 - MER103 DNA DNA -38 128 4 2118 121 0 3 chr2 91095003 91095309 -159592545 + AluSq SINE Alu 1 305 -8 192 40 0 0 chr2 91095309 91095334 -159592520 + (TA)n Simple_repeat Simple_repeat 1 25 0 244 373 42 28 chr2 91095398 91095540 -159592314 - MIR3 SINE MIR -62 146 3 21 57 0 0 chr2 91095642 91095677 -159592177 + AT_rich Low_complexity Low_complexity 1 35 0 3173 139 56 20 chr2 91096965 91097554 -159590300 - MER4B LTR ERV1 0 610 1 811 233 99 117 chr2 91097951 91098607 -159589247 + LTR48B LTR ERV1 1 644 0 21 89 0 0 chr2 91098874 91098930 -159588924 + AT_rich Low_complexity Low_complexity 1 56 0 1526 129 65 19 chr2 91099213 91099476 -159588378 - LTR24 LTR ERV1 -1 466 192 3410 161 33 52 chr2 91099533 91100221 -159587633 + LTR8 LTR ERV1 17 691 0 1280 85 51 0 chr2 91100221 91100397 -159587457 - LTR24 LTR ERV1 -282 185 1 401 248 81 116 chr2 91101201 91101390 -159586464 - MER46C DNA MER2_type -16 322 147 1529 247 124 29 chr2 91101390 91101913 -159585941 + MER90 LTR ERV1 3 575 0 401 248 81 116 chr2 91101913 91102033 -159585821 - MER46C DNA MER2_type -191 147 24 233 260 41 0 chr2 91102049 91102122 -159585732 + L1ME4a LINE L1 5555 5630 -491 370 288 43 0 chr2 91102211 91102350 -159585504 + L1ME4a LINE L1 5775 5919 -202 24 0 0 0 chr2 91103666 91103690 -159584164 + AT_rich Low_complexity Low_complexity 1 24 0 263 340 138 27 chr2 91103725 91103913 -159583941 - MIR SINE MIR -26 236 28 2159 52 4 0 chr2 91104958 91105230 -159582624 + L1PA5 LINE L1 5877 6149 -5 699 275 90 64 chr2 91106214 91106441 -159581413 - L1MCa LINE L1 -4368 2754 2534 186 43 0 0 chr2 91106441 91106464 -159581390 + (TATG)n Simple_repeat Simple_repeat 2 24 0 699 275 90 64 chr2 91106464 91106910 -159580944 - L1MCa LINE L1 -4588 2534 1863 1627 243 14 3 chr2 91106912 91107270 -159580584 + MLT1A1 LTR MaLR 1 362 -3 332 214 48 0 chr2 91107274 91107358 -159580496 - L1MCa LINE L1 -5033 1910 1823 1262 283 75 37 chr2 91107360 91108014 -159579840 - L1MCa LINE L1 -4904 1519 841 198 0 0 0 chr2 91108315 91108337 -159579517 + (TG)n Simple_repeat Simple_repeat 2 23 0 697 186 32 13 chr2 91108348 91108504 -159579350 - L1MC3 LINE L1 -770 7015 6857 236 254 0 16 chr2 91108582 91108645 -159579209 - L1M3e LINE L1 -6959 71 10 2221 179 16 12 chr2 91108819 91109244 -159578610 + MSTA LTR MaLR 1 427 -1 183 222 0 0 chr2 91110930 91110975 -159576879 + (CA)n Simple_repeat Simple_repeat 1 45 0 324 297 51 36 chr2 91111208 91111346 -159576508 + L2 LINE L2 3158 3297 -16 390 362 67 41 chr2 91112731 91112861 -159574993 + L1MC4a LINE L1 4290 4415 -1731 825 235 174 26 chr2 91112861 91113206 -159574648 - MSTD LTR MaLR 0 396 1 390 362 67 41 chr2 91113206 91113616 -159574238 + L1MC4a LINE L1 4415 4844 -1302 732 288 97 45 chr2 91113669 91113909 -159573945 - MLT1H1 LTR MaLR -3 552 326 431 90 13 0 chr2 91113909 91113987 -159573867 + (TCTA)n Simple_repeat Simple_repeat 2 80 0 732 288 97 45 chr2 91113987 91114280 -159573574 - MLT1H1 LTR MaLR -229 326 1 252 333 50 14 chr2 91114725 91114866 -159572988 + L1MC4a LINE L1 5372 5517 -2291 390 261 0 22 chr2 91115001 91115093 -159572761 + MLT1E LTR MaLR 73 162 -431 * 1218 213 67 10 chr2 91115063 91115527 -159572327 + MLT1E1 LTR MaLR 105 654 0 570 245 52 30 chr2 91115551 91115820 -159572034 + L1MC4a LINE L1 5666 5940 -1868 24 67 0 0 chr2 91115962 91116007 -159571847 + AT_rich Low_complexity Low_complexity 1 45 0 2546 149 21 34 chr2 91116263 91116868 -159570986 + MER4B LTR ERV1 1 766 0 1987 257 29 12 chr2 91118139 91118863 -159568991 - L1MCa LINE L1 -2849 3577 2842 * 2457 222 68 20 chr2 91118861 91119554 -159568300 - L1MCa LINE L1 -4941 1485 760 359 321 119 25 chr2 91121671 91121989 -159565865 - L1ME4a LINE L1 -268 5853 5506 417 315 45 39 chr2 91122091 91122269 -159565585 - L2 LINE L2 -17 3296 3118 191 311 34 76 chr2 91123046 91123165 -159564689 - L2 LINE L2 0 3272 3159 433 293 166 0 chr2 91124011 91124216 -159563638 - L1MC4 LINE L1 -9 8033 7795 420 244 9 0 chr2 91124315 91124430 -159563424 - L1M4 LINE L1 -4896 1488 1373 592 109 73 27 chr2 91124434 91124544 -159563310 - MER61D LTR ERV1 0 501 387 2471 202 8 4 chr2 91124555 91125049 -159562805 + L1PA10 LINE L1 13 508 -5367 26039 148 10 15 chr2 91125049 91128552 -159559302 + L1PA10 LINE L1 771 4263 -2220 2255 92 0 23 chr2 91128552 91128856 -159558998 + AluY SINE Alu 1 297 -14 26039 148 10 15 chr2 91128856 91131066 -159556788 + L1PA10 LINE L1 4263 6482 -1 1197 172 82 7 chr2 91131068 91131389 -159556465 - MER61D LTR ERV1 -100 401 1 326 248 41 0 chr2 91132136 91132257 -159555597 + (TA)n Simple_repeat Simple_repeat 1 126 0 42 77 0 0 chr2 91133168 91133259 -159554595 + AT_rich Low_complexity Low_complexity 1 91 0 21 0 0 0 chr2 91133682 91133703 -159554151 + AT_rich Low_complexity Low_complexity 1 21 0 197 198 0 49 chr2 91134946 91135027 -159552827 + (TA)n Simple_repeat Simple_repeat 2 78 0 715 282 130 81 chr2 91135928 91136482 -159551372 + L1ME LINE L1 8 588 -5482 185 385 0 22 chr2 91136641 91136732 -159551122 - MIR SINE MIR -111 151 63 22 35 0 0 chr2 91137848 91137877 -159549977 + AT_rich Low_complexity Low_complexity 1 29 0 514 312 43 24 chr2 91137968 91138221 -159549633 + HAL1 LINE L1 1405 1662 -845 21 0 0 0 chr2 91139182 91139203 -159548651 + AT_rich Low_complexity Low_complexity 1 21 0 490 303 41 36 chr2 91139319 91139540 -159548314 + MIR SINE MIR 40 261 -1 23 33 0 0 chr2 91139572 91139602 -159548252 + AT_rich Low_complexity Low_complexity 1 30 0 2037 194 84 2 chr2 91139609 91140074 -159547780 + L1MB4 LINE L1 5661 6163 -17 304 260 10 10 chr2 91140075 91140171 -159547683 + (TA)n Simple_repeat Simple_repeat 1 96 0 258 200 18 0 chr2 91140195 91140250 -159547604 + L1MB8 LINE L1 6093 6148 -30 21 0 0 0 chr2 91140472 91140493 -159547361 + AT_rich Low_complexity Low_complexity 1 21 0 513 208 20 0 chr2 91140603 91140704 -159547150 + MER58 DNA MER1_type 2318 2420 0 288 0 0 0 chr2 91141107 91141139 -159546715 + (TA)n Simple_repeat Simple_repeat 1 32 0 229 232 0 0 chr2 91142484 91142540 -159545314 - L1MB8 LINE L1 -30 6148 6093 220 276 31 10 chr2 91142565 91142663 -159545191 + (TA)n Simple_repeat Simple_repeat 1 100 0 313 253 92 0 chr2 91142821 91142908 -159544946 - L1MC4 LINE L1 -1338 6704 6610 187 51 0 77 chr2 91143216 91143255 -159544599 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 248 258 0 32 chr2 91143257 91143319 -159544535 + polypyrimidine Low_complexity Low_complexity 4 63 0 270 333 98 52 chr2 91143421 91143748 -159544106 - L2 LINE L2 -1663 1651 1310 2236 87 0 13 chr2 91144143 91144443 -159543411 - AluSc SINE Alu -13 296 1 584 352 75 6 chr2 91146085 91146446 -159541408 - ERVL LTR ERVL -3699 2065 1680 2623 213 31 48 chr2 91146446 91147053 -159540801 - MER77 LTR ERV1 0 605 9 364 321 94 6 chr2 91147071 91147230 -159540624 - ERVL LTR ERVL -4091 1673 1501 1115 303 31 6 chr2 91147716 91148033 -159539821 + LTR16C LTR ERVL 99 423 -68 260 176 81 27 chr2 91148019 91148093 -159539761 - LTR50 LTR ERVL -629 166 89 * 1715 238 76 57 chr2 91148940 91149469 -159538385 - MER77 LTR ERV1 -13 592 54 356 321 42 37 chr2 91150095 91150310 -159537544 - MLT1J LTR MaLR -54 457 242 716 246 14 28 chr2 91150619 91150834 -159537020 - LTR4 LTR ERV1 0 596 385 372 222 103 72 chr2 91151050 91151244 -159536610 - LTR4 LTR ERV1 -396 200 1 252 319 53 63 chr2 91151336 91151392 -159536462 - L2 LINE L2 -175 3138 3083 1896 127 61 28 chr2 91151392 91151755 -159536099 - THE1C LTR MaLR 0 375 1 252 319 53 63 chr2 91151755 91151999 -159535855 - L2 LINE L2 -230 3083 2841 210 361 0 14 chr2 91152742 91152814 -159535040 - L2 LINE L2 -1 3271 3201 31 44 0 0 chr2 91153840 91153885 -159533969 + AT_rich Low_complexity Low_complexity 1 45 0 229 239 0 0 chr2 91154227 91154273 -159533581 + (TA)n Simple_repeat Simple_repeat 1 46 0 404 235 163 0 chr2 91154860 91154958 -159532896 - FRAM SINE Alu -20 146 33 314 292 31 0 chr2 91155266 91155362 -159532492 + MLT1I LTR MaLR 309 407 -2 1462 233 44 53 chr2 91155368 91155819 -159532035 + MLT1C LTR MaLR 21 467 0 194 79 0 53 chr2 91156088 91156126 -159531728 + (TATATG)n Simple_repeat Simple_repeat 3 38 0 1534 183 34 36 chr2 91156653 91156757 -159531097 - L1PA16 LINE L1 -2 6164 6061 1768 161 10 3 chr2 91156757 91157048 -159530806 - AluJo SINE Alu -19 293 1 1534 183 34 36 chr2 91157048 91157299 -159530555 - L1PA16 LINE L1 -105 6061 5810 272 338 193 21 chr2 91158128 91158465 -159529389 + L3 LINE CR1 1180 1574 -3 23 0 0 0 chr2 91158702 91158725 -159529129 + AT_rich Low_complexity Low_complexity 1 23 0 424 198 0 0 chr2 91158849 91158935 -159528919 - L1PA13 LINE L1 0 6163 6078 2547 48 0 0 chr2 91159526 91159835 -159528019 + AluY SINE Alu 1 309 -2 26 64 0 0 chr2 91161805 91161852 -159526002 + AT_rich Low_complexity Low_complexity 1 47 0 195 42 0 0 chr2 91162568 91162592 -159525262 + (A)n Simple_repeat Simple_repeat 1 24 0 1002 217 0 47 chr2 91162763 91162998 -159524856 - AluJo SINE Alu -61 251 28 225 332 16 78 chr2 91163014 91163207 -159524647 + MER102b DNA MER1_type 136 316 -25 748 39 59 16 chr2 91163858 91164121 -159523733 + (TA)n Simple_repeat Simple_repeat 1 274 0 2946 50 0 0 chr2 91164127 91164490 -159523364 - L1PA5 LINE L1 -13 6141 5779 1151 41 0 7 chr2 91164490 91164636 -159523218 + L1PA5 LINE L1 5652 5796 -359 * 7279 253 38 26 chr2 91164634 91167400 -159520454 - L1M4 LINE L1 -1154 4992 2195 1261 301 48 26 chr2 91167393 91167686 -159520168 - L1M4 LINE L1 -1377 4769 4484 * 2053 75 57 7 chr2 91167686 91167965 -159519889 - AluY SINE Alu -18 293 1 1261 301 48 26 chr2 91167965 91168447 -159519407 - L1M4 LINE L1 -1662 4484 3977 402 267 156 39 chr2 91168451 91168631 -159519223 + MER58C DNA MER1_type 1 201 -14 1075 284 124 14 chr2 91168666 91169454 -159518400 - L1M4 LINE L1 -2193 3953 3062 12846 24 11 3 chr2 91169454 91171775 -159516079 - L1PA4 LINE L1 -3 6152 3820 1075 284 124 14 chr2 91171775 91171842 -159516012 - L1M4 LINE L1 -3084 3062 3004 316 322 14 28 chr2 91172108 91172251 -159515603 - L2 LINE L2 -5 3308 3168 21 36 0 0 chr2 91173958 91173986 -159513868 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr2 91174461 91174506 -159513348 + AT_rich Low_complexity Low_complexity 1 45 0 30 27 0 0 chr2 91175650 91175687 -159512167 + AT_rich Low_complexity Low_complexity 1 37 0 259 132 55 0 chr2 91175713 91175804 -159512050 + (TA)n Simple_repeat Simple_repeat 1 96 0 2006 132 0 10 chr2 91175807 91176103 -159511751 - AluSx SINE Alu -19 293 1 21 36 0 0 chr2 91176108 91176136 -159511718 + AT_rich Low_complexity Low_complexity 1 28 0 372 22 0 0 chr2 91176748 91176793 -159511061 + (TG)n Simple_repeat Simple_repeat 2 46 0 3696 216 88 35 chr2 91178775 91179797 -159508057 + Tigger6a DNA MER2_type 8 1083 0 390 132 22 11 chr2 91180048 91180139 -159507715 + (TCTA)n Simple_repeat Simple_repeat 1 92 0 384 22 0 0 chr2 91181330 91181375 -159506479 + (TG)n Simple_repeat Simple_repeat 2 46 0 202 189 0 0 chr2 91181376 91181413 -159506441 + GA-rich Low_complexity Low_complexity 2 38 0 1954 120 4 0 chr2 91182382 91182656 -159505198 + AluSx SINE Alu 21 295 -17 1004 195 10 5 chr2 91183840 91184045 -159503809 + L1MB5 LINE L1 5799 6004 -170 655 237 33 57 chr2 91184306 91184606 -159503248 - pTR5 LTR ERV1 -1377 1061 769 349 86 103 0 chr2 91184659 91184717 -159503137 - L1PBa LINE L1 -5706 1157 1094 2617 236 74 13 chr2 91184724 91185600 -159502254 - L1PBa LINE L1 -5820 1043 114 881 186 8 85 chr2 91185859 91186095 -159501759 - MER20 DNA MER1_type 0 219 2 279 266 11 11 chr2 91186283 91186377 -159501477 + L1MB5 LINE L1 5768 5861 -260 23 0 0 0 chr2 91186936 91186959 -159500895 + AT_rich Low_complexity Low_complexity 1 23 0 327 49 0 0 chr2 91187238 91187279 -159500575 + (TG)n Simple_repeat Simple_repeat 2 42 0 24 0 0 0 chr2 91187357 91187381 -159500473 + AT_rich Low_complexity Low_complexity 1 24 0 573 167 58 0 chr2 91187413 91187533 -159500321 + L1MB5 LINE L1 6045 6171 -3 220 356 59 0 chr2 91187804 91187922 -159499932 - MIR3 SINE MIR -50 158 34 1128 199 64 25 chr2 91188465 91188747 -159499107 - L1MB4 LINE L1 -3 6177 5885 3885 143 36 8 chr2 91188763 91189433 -159498421 - L1MC1 LINE L1 -9 6324 5636 180 273 0 0 chr2 91189436 91189513 -159498341 + A-rich Low_complexity Low_complexity 1 77 0 247 250 0 29 chr2 91189525 91189593 -159498261 + A-rich Low_complexity Low_complexity 5 70 0 1652 216 109 33 chr2 91189713 91190143 -159497711 + MLT2B1 LTR ERVL 1 463 -57 189 74 0 0 chr2 91190148 91190175 -159497679 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 435 29 29 14 chr2 91190176 91190246 -159497608 + (TAGA)n Simple_repeat Simple_repeat 3 73 0 21 0 0 0 chr2 91190965 91190986 -159496868 + AT_rich Low_complexity Low_complexity 1 21 0 225 65 0 0 chr2 91191130 91191161 -159496693 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 240 35 0 0 chr2 91191437 91191466 -159496388 + (CAG)n Simple_repeat Simple_repeat 1 29 0 2594 206 49 15 chr2 91191640 91192255 -159495599 - MER92B LTR ERV1 0 636 1 298 320 8 8 chr2 91192886 91193011 -159494843 + (TA)n Simple_repeat Simple_repeat 2 126 0 327 220 119 0 chr2 91193026 91193144 -159494710 + LTR37A LTR ERV1 283 414 -12 180 350 31 81 chr2 91194861 91195021 -159492833 - L2 LINE L2 -3 3269 3118 28 0 0 0 chr2 91195110 91195138 -159492716 + AT_rich Low_complexity Low_complexity 1 28 0 2173 95 20 0 chr2 91195958 91196252 -159491602 - AluSx SINE Alu -12 300 1 435 283 118 48 chr2 91197216 91197573 -159490281 + MLT2F LTR ERVL 282 663 0 21 0 0 0 chr2 91198523 91198544 -159489310 + AT_rich Low_complexity Low_complexity 1 21 0 449 291 24 57 chr2 91200481 91200691 -159487163 - MER21B LTR ERV1 -150 713 511 257 172 16 0 chr2 91200966 91201030 -159486824 + (CA)n Simple_repeat Simple_repeat 2 66 0 367 192 10 10 chr2 91201124 91201228 -159486626 + (TA)n Simple_repeat Simple_repeat 2 105 0 236 200 17 0 chr2 91201255 91201315 -159486539 + (TG)n Simple_repeat Simple_repeat 2 62 0 956 103 0 0 chr2 91201369 91201495 -159486359 - AluSq/x SINE Alu -180 133 8 267 79 0 0 chr2 91202210 91202248 -159485606 + (GA)n Simple_repeat Simple_repeat 1 38 0 4427 200 81 16 chr2 91203203 91204411 -159483443 - L1MC2 LINE L1 -12 6332 5050 1362 154 49 8 chr2 91204443 91204689 -159483165 + Tigger5 DNA MER2_type 2067 2322 -1 7180 42 5 3 chr2 91204689 91206270 -159481584 + L1PA5 LINE L1 4570 6141 -13 185 0 40 0 chr2 91206271 91206296 -159481558 + (TA)n Simple_repeat Simple_repeat 1 26 0 228 208 39 0 chr2 91206306 91206383 -159481471 - L1MC2 LINE L1 -1093 5053 4974 * 291 269 42 74 chr2 91206373 91206589 -159481265 - L1ME3A LINE L1 0 6170 5962 207 0 0 0 chr2 91206630 91206653 -159481201 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 267 83 48 24 chr2 91206675 91206759 -159481095 + (TA)n Simple_repeat Simple_repeat 1 86 0 353 193 61 44 chr2 91207178 91207292 -159480562 + L1MB5 LINE L1 5979 6094 -80 1458 92 0 74 chr2 91208702 91208931 -159478923 - AluSc SINE Alu -97 212 1 320 362 47 21 chr2 91208948 91209183 -159478671 - L1M4 LINE L1 -2480 3666 3426 1302 56 0 0 chr2 91209694 91209856 -159477998 - AluY SINE Alu -15 296 135 249 57 0 0 chr2 91209863 91209898 -159477956 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 225 345 43 29 chr2 91211597 91211736 -159476118 - MIR SINE MIR -21 241 101 190 237 26 0 chr2 91213153 91213191 -159474663 + MIR3 SINE MIR 149 187 -21 26 50 0 0 chr2 91213441 91213481 -159474373 + AT_rich Low_complexity Low_complexity 1 40 0 532 360 174 13 chr2 91214127 91214973 -159472881 - L2 LINE L2 -258 3055 2067 244 212 71 0 chr2 91215027 91215112 -159472742 + (TAGA)n Simple_repeat Simple_repeat 3 93 0 356 331 97 12 chr2 91215122 91215370 -159472484 - L2 LINE L2 -1298 2016 1748 367 345 50 7 chr2 91215433 91215572 -159472282 + L2 LINE L2 3127 3271 -1 3252 133 54 25 chr2 91216743 91217336 -159470518 - MER4B LTR ERV1 0 610 1 290 270 79 0 chr2 91217457 91217546 -159470308 - MIR3 SINE MIR -48 160 65 691 219 0 26 chr2 91217996 91218151 -159469703 - MER89 LTR ERV1 0 559 409 2375 258 40 72 chr2 91218159 91219161 -159468693 - MER89-int LTR ERV1 -5389 1412 443 1479 254 22 50 chr2 91219476 91219940 -159467914 - MER89 LTR ERV1 -9 550 1 813 236 118 16 chr2 91220591 91221014 -159466840 - LTR37B LTR ERV1 0 468 3 3290 148 20 2 chr2 91221053 91221880 -159465974 + L1P4 LINE L1 4933 5769 -397 425 56 0 56 chr2 91221880 91221952 -159465902 + L1PA16 LINE L1 6098 6165 -1 984 204 62 7 chr2 91222472 91222765 -159465089 + MER33 DNA MER1_type 1 302 -22 204 40 0 0 chr2 91223027 91223052 -159464802 + (CATA)n Simple_repeat Simple_repeat 2 26 0 2165 223 52 17 chr2 91225307 91225788 -159462066 - MLT1D LTR MaLR -7 498 1 1040 209 61 119 chr2 91225788 91226200 -159461654 - MLT1D-int LTR MaLR 0 1371 984 460 48 0 0 chr2 91226198 91226261 -159461593 + L1PA4 LINE L1 5947 6009 -146 * 835 131 15 0 chr2 91226400 91226530 -159461324 + L1PA4 LINE L1 6014 6145 -10 555 278 19 25 chr2 91226713 91226875 -159460979 - MLT1D-int LTR MaLR -480 891 731 734 269 8 111 chr2 91226881 91227260 -159460594 - MLT1D LTR MaLR -165 340 1 866 94 0 24 chr2 91227291 91227418 -159460436 + L1PA16 LINE L1 6034 6157 -9 27 29 0 0 chr2 91227466 91227500 -159460354 + AT_rich Low_complexity Low_complexity 1 34 0 237 265 29 0 chr2 91227863 91227931 -159459923 + L1P4 LINE L1 5673 5742 -419 1102 223 110 23 chr2 91228380 91228680 -159459174 - MER58B DNA MER1_type -3 338 13 599 77 0 0 chr2 91228747 91228825 -159459029 + AluSg/x SINE Alu 216 293 -19 2161 122 3 0 chr2 91229028 91229331 -159458523 + AluSg SINE Alu 1 304 -6 224 167 0 19 chr2 91230249 91230303 -159457551 + (TA)n Simple_repeat Simple_repeat 2 54 0 818 167 69 16 chr2 91230304 91230600 -159457254 + MER47A DNA MER2_type 2 361 -5 360 0 0 0 chr2 91230600 91230640 -159457214 + (TG)n Simple_repeat Simple_repeat 2 41 0 224 123 46 15 chr2 91231013 91231078 -159456776 + (TA)n Simple_repeat Simple_repeat 1 67 0 21 0 0 0 chr2 91232487 91232508 -159455346 + AT_rich Low_complexity Low_complexity 1 21 0 390 172 115 0 chr2 91232809 91232896 -159454958 - L1MC2 LINE L1 -5 6339 6243 3659 193 42 5 chr2 91232909 91233649 -159454205 - L1MC2 LINE L1 -146 6198 5432 625 316 35 13 chr2 91233673 91233904 -159453950 + MIR SINE MIR 17 252 -10 21 0 0 0 chr2 91235412 91235433 -159452421 + AT_rich Low_complexity Low_complexity 1 21 0 206 384 0 0 chr2 91237472 91237545 -159450309 + L2 LINE L2 3194 3266 -47 22 0 0 0 chr2 91237632 91237654 -159450200 + AT_rich Low_complexity Low_complexity 1 22 0 540 151 0 0 chr2 91238235 91238321 -159449533 - AluS SINE Alu -226 86 1 283 170 19 0 chr2 91239195 91239248 -159448606 + MIR SINE MIR 101 154 -108 225 0 0 0 chr2 91239626 91239651 -159448203 + (TG)n Simple_repeat Simple_repeat 2 26 0 1940 121 46 0 chr2 91240647 91240928 -159446926 - AluSx SINE Alu -18 294 1 242 224 20 0 chr2 91241648 91241697 -159446157 + (TG)n Simple_repeat Simple_repeat 1 50 0 21 0 0 0 chr2 91241926 91241947 -159445907 + AT_rich Low_complexity Low_complexity 1 21 0 550 302 64 33 chr2 91242484 91242643 -159445211 + L1ME3A LINE L1 5477 5630 -540 345 269 96 0 chr2 91242643 91242747 -159445107 + MER81 DNA DNA 1 114 0 550 302 64 33 chr2 91242747 91242981 -159444873 + L1ME3A LINE L1 5630 5883 -287 2521 199 19 16 chr2 91243083 91243650 -159444204 + L1MB8 LINE L1 5400 5968 -210 340 191 0 43 chr2 91243667 91243761 -159444093 + L1MB8 LINE L1 6089 6178 0 885 251 22 17 chr2 91246842 91246956 -159440898 - AluJo SINE Alu -76 236 124 189 0 0 0 chr2 91246956 91246977 -159440877 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 885 251 22 17 chr2 91246977 91247093 -159440761 - AluJo SINE Alu -188 124 5 613 268 14 0 chr2 91247326 91247468 -159440386 - MER5A DNA MER1_type -45 144 1 1281 99 0 0 chr2 91251187 91251359 -159436495 + AluSg/x SINE Alu 135 306 -4 23 0 0 0 chr2 91254371 91254394 -159433460 + AT_rich Low_complexity Low_complexity 1 23 0 379 150 0 0 chr2 91254544 91254604 -159433250 + MER63 DNA MER1_type 690 749 -87 248 317 24 0 chr2 91254607 91254689 -159433165 + MER63 DNA MER1_type 977 1060 0 3216 159 18 15 chr2 91254795 91255392 -159432462 - L1MA8 LINE L1 -387 5904 5306 2129 99 0 7 chr2 91255393 91255701 -159432153 + AluSg SINE Alu 1 306 0 1265 163 9 18 chr2 91255770 91255997 -159431857 + MSTD LTR MaLR 1 225 -171 252 113 0 38 chr2 91255991 91256044 -159431810 + LTR66 LTR ERVL 389 439 -171 * 635 103 70 3 chr2 91256051 91256354 -159431500 + (TA)n Simple_repeat Simple_repeat 1 323 0 458 287 42 23 chr2 91256917 91257178 -159430676 + L1MEd LINE L1 888 1153 -4966 1792 124 0 22 chr2 91257804 91258077 -159429777 - AluSx SINE Alu -45 267 1 25 31 0 0 chr2 91258088 91258120 -159429734 + AT_rich Low_complexity Low_complexity 1 32 0 27 29 0 0 chr2 91258186 91258220 -159429634 + AT_rich Low_complexity Low_complexity 1 34 0 229 284 117 47 chr2 91258689 91259107 -159428747 + L1MC/D LINE L1 5266 5724 -436 2836 217 59 43 chr2 91259291 91260082 -159427772 + MER45B DNA AcHobo 237 1040 0 11987 257 28 21 chr2 91260361 91261335 -159426519 - L1PB4 LINE L1 -3 6855 5889 264 30 0 0 chr2 91261335 91261368 -159426486 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 11987 257 28 21 chr2 91261368 91266073 -159421781 - L1PB4 LINE L1 -969 5889 999 379 289 111 132 chr2 91266261 91266739 -159421115 - L1PB4 LINE L1 -5715 1134 672 1890 131 13 39 chr2 91267183 91267495 -159420359 + AluSx SINE Alu 9 312 0 383 336 30 15 chr2 91267518 91267649 -159420205 - L1PB4 LINE L1 -6037 812 680 990 274 74 40 chr2 91267735 91268114 -159419740 - L1PB4 LINE L1 -6450 399 8 207 405 26 37 chr2 91269356 91269546 -159418308 + L2 LINE L2 2830 3017 -255 31 82 0 0 chr2 91269675 91269748 -159418106 + AT_rich Low_complexity Low_complexity 1 73 0 24 0 0 0 chr2 91270055 91270079 -159417775 + AT_rich Low_complexity Low_complexity 1 24 0 932 64 88 0 chr2 91270115 91270240 -159417614 + AluYa5 SINE Alu 160 295 -16 1010 248 14 0 chr2 91271972 91272182 -159415672 - ERVL LTR ERVL -1247 4517 4305 541 179 60 8 chr2 91272506 91272623 -159415231 + L1M1 LINE L1 11 133 -7432 * 3596 195 37 2 chr2 91272621 91273247 -159414607 + L1M1 LINE L1 1100 1747 -5818 1232 377 55 27 chr2 91273362 91274596 -159413258 - L2 LINE L2 0 3313 2052 843 261 114 25 chr2 91275001 91275561 -159412293 + L1MEc LINE L1 758 1367 -5029 2598 109 73 12 chr2 91275576 91275612 -159412242 - MLT2A1 LTR ERVL -6 438 406 405 0 0 0 chr2 91275612 91275657 -159412197 + (CA)n Simple_repeat Simple_repeat 2 46 0 2598 109 73 12 chr2 91275657 91276033 -159411821 - MLT2A1 LTR ERVL -38 406 1 1132 300 41 6 chr2 91276034 91276567 -159411287 + L1MEc LINE L1 1382 1933 -4463 23 78 0 0 chr2 91276927 91276978 -159410876 + AT_rich Low_complexity Low_complexity 1 51 0 2510 58 7 0 chr2 91278249 91278557 -159409297 + AluY SINE Alu 1 310 -1 1017 174 0 0 chr2 91278557 91278729 -159409125 + ERVL-D LTR ERVL 5586 5757 -7 1439 201 80 26 chr2 91278733 91279122 -159408732 + MLT2D LTR ERVL 5 414 0 7073 168 7 10 chr2 91279244 91280999 -159406855 - L1PB1 LINE L1 -1 6150 4402 234 0 0 0 chr2 91280999 91281025 -159406829 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 7073 168 7 10 chr2 91281025 91281559 -159406295 - L1PB1 LINE L1 -1749 4402 3868 21 0 0 0 chr2 91281603 91281624 -159406230 + AT_rich Low_complexity Low_complexity 1 21 0 376 169 45 0 chr2 91282483 91282572 -159405282 - L1MB3 LINE L1 -4 6179 6087 569 173 273 7 chr2 91282580 91282730 -159405124 - L1MA4 LINE L1 -283 6017 5828 315 175 30 62 chr2 91282702 91282807 -159405047 + L1MA4 LINE L1 5748 5848 -452 * 582 304 122 8 chr2 91282892 91283392 -159404462 - L1MEc LINE L1 -3051 3029 2473 657 193 75 12 chr2 91283393 91283554 -159404300 + MLT1B LTR MaLR 1 171 -219 228 67 0 0 chr2 91283557 91283587 -159404267 + (CA)n Simple_repeat Simple_repeat 1 30 0 468 62 0 0 chr2 91283590 91283654 -159404200 + (GA)n Simple_repeat Simple_repeat 1 64 0 719 233 17 23 chr2 91283663 91283835 -159404019 + MLT1B LTR MaLR 204 374 -16 642 256 118 73 chr2 91283852 91284857 -159402997 - L1MEc LINE L1 -3605 2475 1463 253 269 93 62 chr2 91284999 91285289 -159402565 - L1MEc LINE L1 -4880 1200 902 548 338 34 3 chr2 91285351 91285674 -159402180 - L1MEc LINE L1 -5240 830 498 639 238 123 34 chr2 91285958 91286307 -159401547 - Charlie2 DNA MER1_type -504 2358 1979 764 256 90 75 chr2 91286332 91286876 -159400978 - Charlie2a DNA MER1_type -1806 1056 505 1251 301 19 23 chr2 91286884 91287363 -159400491 + MER110 LTR ERV1 1 477 -14 393 234 35 78 chr2 91287538 91287679 -159400175 - MLT1C LTR MaLR -324 143 9 901 219 57 18 chr2 91288077 91288305 -159399549 - MER89 LTR ERV1 0 559 323 523 187 0 6 chr2 91288357 91288494 -159399360 - MER89 LTR ERV1 -324 235 1 723 288 48 32 chr2 91289031 91289465 -159398389 + L1M4 LINE L1 1237 1677 -4865 405 325 44 76 chr2 91289618 91290024 -159397830 + MER110-int LTR ERV1 3403 3795 -852 1815 117 0 35 chr2 91290171 91290461 -159397393 + AluSx SINE Alu 3 282 -30 1219 256 35 87 chr2 91290565 91290900 -159396954 + MER110-int LTR ERV1 4017 4315 -332 2045 134 0 0 chr2 91290900 91291198 -159396656 - AluSx SINE Alu -14 298 1 1219 256 35 87 chr2 91291198 91291404 -159396450 + MER110-int LTR ERV1 4315 4530 -117 1824 161 24 0 chr2 91291407 91291698 -159396156 - AluSx SINE Alu -14 298 1 285 220 132 11 chr2 91291791 91291882 -159395972 + MER110 LTR ERV1 1 102 -389 233 290 16 0 chr2 91291906 91291965 -159395889 - MER20 DNA MER1_type -3 216 157 880 246 75 29 chr2 91291965 91292402 -159395452 - MLT2B1 LTR ERVL 0 464 1 339 254 14 0 chr2 91292422 91292493 -159395361 - MER20 DNA MER1_type -79 140 69 207 314 102 58 chr2 91292919 91293056 -159394798 + MIR3 SINE MIR 8 150 -58 565 277 14 14 chr2 91293556 91293769 -159394085 + MER110 LTR ERV1 153 365 -126 240 239 354 0 chr2 91294676 91294806 -159393048 - Charlie2a DNA MER1_type -2443 419 244 459 0 0 0 chr2 91294828 91294879 -159392975 + (TG)n Simple_repeat Simple_repeat 2 52 0 1244 212 35 61 chr2 91295056 91295452 -159392402 - MLT1B LTR MaLR 0 390 5 1314 128 79 0 chr2 91296623 91296826 -159391028 + AluSq SINE Alu 1 219 -94 347 194 14 0 chr2 91296839 91296911 -159390943 + MER74A LTR ERVL 486 558 0 210 189 0 0 chr2 91297411 91297448 -159390406 - MIR SINE MIR -5 257 221 637 294 30 40 chr2 91298751 91299047 -159388807 + MLT1I LTR MaLR 97 389 -20 5083 178 32 7 chr2 91299526 91301297 -159386557 - L1PA16 LINE L1 -9 6157 4344 1820 175 138 8 chr2 91301298 91301675 -159386179 - MSTA LTR MaLR 0 428 3 9030 178 21 7 chr2 91301678 91303283 -159384571 - MSTA-int LTR MaLR -1 1650 24 1725 179 155 11 chr2 91303318 91303692 -159384162 - MSTA LTR MaLR 0 428 1 1512 196 3 3 chr2 91303692 91303977 -159383877 - L1 LINE L1 -1802 4344 4060 1883 259 39 21 chr2 91304659 91306098 -159381756 + L1MCb LINE L1 7 1541 -4849 4054 210 57 1 chr2 91306139 91307062 -159380792 + L1MC3 LINE L1 5877 6851 -934 1077 220 42 23 chr2 91307065 91307467 -159380387 + MER34 LTR ERV1 28 471 -71 1348 233 40 48 chr2 91307467 91307866 -159379988 - MSTD LTR MaLR 0 396 1 232 128 0 64 chr2 91307866 91307913 -159379941 + MER34 LTR ERV1 471 514 -28 3154 222 35 15 chr2 91307971 91308764 -159379090 + L1MC3 LINE L1 6882 7690 -95 4691 199 26 19 chr2 91309454 91309931 -159377923 - L1MA9 LINE L1 -25 6287 5815 210 37 0 0 chr2 91309931 91309958 -159377896 + (TC)n Simple_repeat Simple_repeat 2 28 0 4691 199 26 19 chr2 91309958 91310507 -159377347 - L1MA9 LINE L1 -497 5815 5254 26 0 0 0 chr2 91311053 91311079 -159376775 + AT_rich Low_complexity Low_complexity 1 26 0 420 39 0 0 chr2 91312219 91312271 -159375583 - L1PA6 LINE L1 -8 6146 6095 21 57 0 0 chr2 91312293 91312328 -159375526 + AT_rich Low_complexity Low_complexity 1 35 0 299 221 30 133 chr2 91313303 91313566 -159374288 + LTR37B LTR ERV1 6 241 -227 186 43 0 0 chr2 91313582 91313605 -159374249 + (A)n Simple_repeat Simple_repeat 1 23 0 1954 122 7 7 chr2 91313625 91313913 -159373941 + AluSx SINE Alu 1 288 -24 24 32 0 0 chr2 91313988 91314019 -159373835 + AT_rich Low_complexity Low_complexity 1 31 0 2553 43 7 0 chr2 91314997 91315301 -159372553 - AluY SINE Alu -5 306 1 2178 121 3 0 chr2 91315681 91315979 -159371875 + AluSc SINE Alu 1 299 -10 383 324 47 33 chr2 91517845 91518058 -159169796 - MIR SINE MIR 0 262 47 529 305 150 30 chr2 91518197 91518430 -159169424 - MIR SINE MIR -1 261 1 1979 125 14 0 chr2 91518521 91518810 -159169044 + AluSx SINE Alu 12 304 -8 8341 187 23 9 chr2 91518820 91521105 -159166749 - L1M1 LINE L1 -547 7176 4859 * 16135 193 53 19 chr2 91521102 91524426 -159163428 - L1M1 LINE L1 -4117 3448 12 195 333 97 0 chr2 91524470 91524563 -159163291 + MIR SINE MIR 42 143 -65 441 331 20 20 chr2 91524674 91524825 -159163029 - MER5A DNA MER1_type -13 176 26 24 53 0 0 chr2 91524988 91525026 -159162828 + AT_rich Low_complexity Low_complexity 1 38 0 266 363 58 47 chr2 91525503 91525674 -159162180 + MIR SINE MIR 23 195 -67 2563 161 12 0 chr2 91525704 91526126 -159161728 + MSTA LTR MaLR 1 427 -1 297 219 0 0 chr2 91526134 91526207 -159161647 + GA-rich Low_complexity Low_complexity 3 75 0 460 308 46 59 chr2 91526209 91526303 -159161551 - MIR SINE MIR -10 252 158 1972 134 0 23 chr2 91526303 91526608 -159161246 - AluSx SINE Alu -14 298 1 460 308 46 59 chr2 91526608 91526750 -159161104 - MIR SINE MIR -104 158 19 832 264 35 89 chr2 91526833 91527258 -159160596 + MLT1I LTR MaLR 1 402 -7 345 312 50 50 chr2 91527967 91528188 -159159666 - L2 LINE L2 -15 3298 3078 472 258 45 102 chr2 91528244 91528488 -159159366 - L1ME1 LINE L1 -51 6115 5883 322 219 27 0 chr2 91528497 91528570 -159159284 - L1MEc LINE L1 -6293 103 29 26 50 0 0 chr2 91528708 91528748 -159159106 + AT_rich Low_complexity Low_complexity 1 40 0 21 95 0 0 chr2 91528894 91528957 -159158897 + AT_rich Low_complexity Low_complexity 1 63 0 225 154 0 0 chr2 91529016 91529055 -159158799 + (CATA)n Simple_repeat Simple_repeat 2 40 0 313 316 123 50 chr2 91529087 91529590 -159158264 - L1ME1 LINE L1 -2001 5807 5268 1604 136 29 67 chr2 91529724 91530070 -159157784 - L1MA8 LINE L1 0 6291 5959 667 297 68 28 chr2 91530283 91530532 -159157322 - MIR SINE MIR 0 262 4 254 318 120 10 chr2 91530705 91530897 -159156957 - L1ME1 LINE L1 -1446 4700 4488 1664 88 4 4 chr2 91531063 91531301 -159156553 + L1PA13 LINE L1 5922 6159 -4 3242 187 16 38 chr2 91531471 91532157 -159155697 - LTR51 LTR ERV1 0 671 1 407 304 125 0 chr2 91532211 91532451 -159155403 - L1ME3A LINE L1 -202 5968 5699 1304 283 80 25 chr2 91532575 91533022 -159154832 - L1ME3A LINE L1 -1537 4609 4188 1955 151 48 31 chr2 91533022 91533380 -159154474 + THE1B LTR MaLR 1 364 0 1304 283 80 25 chr2 91533380 91533860 -159153994 - L1ME3A LINE L1 -1958 4188 3631 2695 264 95 47 chr2 91533949 91534261 -159153593 + L1ME2 LINE L1 3523 3819 -2327 2468 71 0 0 chr2 91534261 91534572 -159153282 + AluY SINE Alu 1 311 0 2695 264 95 47 chr2 91534572 91535887 -159151967 + L1ME2 LINE L1 3819 5228 -918 1852 231 19 38 chr2 91535905 91536433 -159151421 + L1ME2 LINE L1 5493 6010 -154 25 31 0 0 chr2 91538782 91538814 -159149040 + AT_rich Low_complexity Low_complexity 1 32 0 2061 159 25 8 chr2 91538915 91539273 -159148581 - THE1B LTR MaLR 0 364 1 10026 114 19 44 chr2 91539273 91540894 -159146960 - THE1B-int LTR MaLR 0 1580 1 1998 172 25 0 chr2 91540894 91541249 -159146605 - THE1B LTR MaLR 0 364 1 4230 242 23 10 chr2 91541325 91542345 -159145509 + L1PA13 LINE L1 848 1823 -4964 5747 195 4 11 chr2 91542346 91543554 -159144300 + L1PA13 LINE L1 4751 5957 -857 1590 156 72 33 chr2 91543554 91543914 -159143940 + THE1C LTR MaLR 2 375 0 5747 195 4 11 chr2 91543914 91544762 -159143092 + L1PA13 LINE L1 5957 6809 -5 1309 91 0 0 chr2 91544986 91545162 -159142692 - AluSp SINE Alu -8 305 130 1736 204 49 0 chr2 91545248 91545596 -159142258 + MLT1A1 LTR MaLR 1 365 0 279 311 144 0 chr2 91545614 91545746 -159142108 - MIR SINE MIR -11 251 101 356 279 106 19 chr2 91545806 91545967 -159141887 + MIR SINE MIR 88 262 0 246 128 0 0 chr2 91545979 91546018 -159141836 + (A)n Simple_repeat Simple_repeat 1 39 0 615 62 0 0 chr2 91547396 91547476 -159140378 + (TA)n Simple_repeat Simple_repeat 2 81 0 1388 259 26 47 chr2 91547930 91548467 -159139387 + L1MB7 LINE L1 1123 1648 -4736 376 235 59 0 chr2 91548573 91548675 -159139179 + L1MB7 LINE L1 3764 3871 -2511 * 491 258 65 0 chr2 91548673 91548797 -159139057 - L1 LINE L1 -1929 4217 4086 1555 250 80 25 chr2 91548828 91549400 -159138454 + L1MB7 LINE L1 3883 4486 -1896 3800 191 56 20 chr2 91549460 91550454 -159137400 + L1MB7 LINE L1 5375 6401 -19 278 309 99 23 chr2 91550470 91550732 -159137122 + L1M4 LINE L1 3473 3754 -2392 201 74 0 0 chr2 91551583 91551610 -159136244 + (T)n Simple_repeat Simple_repeat 1 27 0 430 277 57 21 chr2 91551818 91551959 -159135895 + MIR SINE MIR 29 174 -88 2115 123 0 0 chr2 91553004 91553304 -159134550 - AluSx SINE Alu -12 300 1 338 318 79 0 chr2 91553788 91553914 -159133940 - MIR SINE MIR -14 248 113 289 288 34 51 chr2 91553889 91553915 -159133939 - L2 LINE L2 -210 3103 3078 * 1137 247 48 22 chr2 91553915 91554271 -159133583 + MLT1A1 LTR MaLR 1 365 0 289 288 34 51 chr2 91554271 91554362 -159133492 - L2 LINE L2 -235 3078 2988 1895 198 64 7 chr2 91554660 91555069 -159132785 + Tigger6a DNA MER2_type 15 446 -637 233 247 12 0 chr2 91555079 91555160 -159132694 + (TATATG)n Simple_repeat Simple_repeat 3 84 0 964 218 55 0 chr2 91555312 91555514 -159132340 - MER58A DNA MER1_type -1 223 11 233 277 77 92 chr2 91555653 91555848 -159132006 - HAL1b LINE L1 -824 524 333 8318 152 4 14 chr2 91555975 91557492 -159130362 - L1M1 LINE L1 -4110 3455 1954 2934 191 49 8 chr2 91557493 91558132 -159129722 + MER4D LTR ERV1 232 656 -8 216 0 0 0 chr2 91558132 91558156 -159129698 + (T)n Simple_repeat Simple_repeat 1 24 0 759 261 62 76 chr2 91558505 91558941 -159128913 - LTR16A1 LTR ERVL 0 457 28 1332 238 58 19 chr2 91558949 91559510 -159128344 - L1MDa LINE L1 -3893 2647 2212 599 223 161 5 chr2 91559514 91559707 -159128147 - L1MDa LINE L1 -4366 2174 1952 235 182 91 0 chr2 91561237 91561303 -159126551 - LTR66 LTR ERVL -171 439 368 379 268 21 134 chr2 91561365 91561559 -159126295 - MIR SINE MIR -89 173 2 193 234 0 168 chr2 91561809 91561881 -159125973 - MER5B DNA MER1_type -59 119 69 2348 37 40 10 chr2 91561881 91562177 -159125677 - AluY SINE Alu -6 305 1 193 234 0 168 chr2 91562177 91562211 -159125643 - MER5B DNA MER1_type -109 69 31 205 197 56 56 chr2 91562683 91562754 -159125100 + MIR SINE MIR 68 138 -124 590 294 14 0 chr2 91564060 91564203 -159123651 + MIR SINE MIR 53 197 -65 13817 156 17 4 chr2 91564235 91566620 -159121234 + Tigger1 DNA MER2_type 2 2417 -1 443 324 40 86 chr2 91568246 91568268 -159119586 + L2 LINE L2 2695 2716 -556 774 144 22 0 chr2 91568268 91568407 -159119447 - L1MA6 LINE L1 0 6300 6159 443 324 40 86 chr2 91568407 91568985 -159118869 + L2 LINE L2 2716 3272 0 1984 216 31 2 chr2 91569341 91569757 -159118097 + L1M1 LINE L1 1484 1911 -5654 2451 99 41 3 chr2 91569757 91570120 -159117734 + MLT2A1 LTR ERVL 1 377 -67 564 0 40 0 chr2 91570123 91570199 -159117655 + (TAGA)n Simple_repeat Simple_repeat 1 79 0 27804 98 6 6 chr2 91570199 91574214 -159113640 + HERVL-A1 LTR ERVL 1637 5654 0 3237 86 2 22 chr2 91574214 91574667 -159113187 + MLT2A1 LTR ERVL 1 444 0 8102 196 24 19 chr2 91574686 91575600 -159112254 + L1M1 LINE L1 1943 2851 -4714 243 0 0 0 chr2 91575600 91575627 -159112227 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8102 196 24 19 chr2 91575627 91577368 -159110486 + L1M1 LINE L1 2851 4627 -2938 2343 90 3 3 chr2 91577368 91577667 -159110187 - AluSx SINE Alu -13 299 1 8102 196 24 19 chr2 91577667 91578599 -159109255 + L1M1 LINE L1 4627 5553 -2012 497 224 100 24 chr2 91578619 91578789 -159109065 - L1 LINE L1 -2864 3868 3686 1230 256 47 37 chr2 91578791 91579052 -159108802 - L1 LINE L1 -3386 3346 3076 1749 168 3 26 chr2 91579052 91579362 -159108492 - AluJb SINE Alu -9 303 1 1230 256 47 37 chr2 91579362 91579589 -159108265 - L1 LINE L1 -3656 3076 2853 351 0 0 0 chr2 91579589 91579628 -159108226 + (TG)n Simple_repeat Simple_repeat 2 40 0 5664 274 39 34 chr2 91579651 91580721 -159107133 - L1 LINE L1 -3180 3552 2489 4885 141 4 38 chr2 91580721 91581543 -159106311 + LTR25 LTR ERV1 1 794 0 5664 274 39 34 chr2 91581543 91584439 -159103415 - L1 LINE L1 -4243 2489 19 4091 131 36 82 chr2 91584440 91585262 -159102592 + LTR1 LTR ERV1 1 785 0 15238 171 40 36 chr2 91585303 91586147 -159101707 + HUERS-P2 LTR ERV1 42 881 -2207 2470 53 3 0 chr2 91586147 91586450 -159101404 + AluY SINE Alu 1 304 -7 15238 171 40 36 chr2 91586450 91588093 -159099761 + HUERS-P2 LTR ERV1 881 2547 -541 2323 90 6 10 chr2 91588093 91588404 -159099450 - AluSp SINE Alu -3 310 1 15238 171 40 36 chr2 91588404 91588949 -159098905 + HUERS-P2 LTR ERV1 2547 3088 0 3988 154 19 41 chr2 91588962 91589759 -159098095 + LTR1 LTR ERV1 7 785 0 830 294 5 5 chr2 91589763 91589981 -159097873 - L1 LINE L1 -6141 512 295 449 241 0 68 chr2 91590111 91590273 -159097581 - L1M4 LINE L1 -1149 4997 4847 29 0 0 0 chr2 91590402 91590431 -159097423 + AT_rich Low_complexity Low_complexity 1 29 0 2235 111 0 3 chr2 91590668 91590974 -159096880 - AluSp SINE Alu -7 306 2 21 36 0 0 chr2 91591093 91591121 -159096733 + AT_rich Low_complexity Low_complexity 1 28 0 423 0 0 0 chr2 91591461 91591508 -159096346 + (CA)n Simple_repeat Simple_repeat 2 48 0 219 264 92 11 chr2 91591759 91591846 -159096008 + L2 LINE L2 3220 3313 0 372 302 59 71 chr2 91593536 91593705 -159094149 + L2 LINE L2 3101 3267 -5 284 198 49 0 chr2 91593841 91593922 -159093932 - MER53 DNA DNA 0 189 105 21 57 0 0 chr2 91594026 91594061 -159093793 + AT_rich Low_complexity Low_complexity 1 35 0 17278 20 0 0 chr2 91594063 91596963 -159090891 - L1HS LINE L1 -3 6152 3253 416 139 0 0 chr2 91596964 91597036 -159090818 - MER53 DNA DNA -117 72 1 381 131 0 0 chr2 91597273 91597334 -159090520 + (A)n Simple_repeat Simple_repeat 1 61 0 2559 48 3 10 chr2 91597508 91597821 -159090033 + AluY SINE Alu 1 311 0 21 57 0 0 chr2 91598708 91598743 -159089111 + AT_rich Low_complexity Low_complexity 1 35 0 213 377 0 0 chr2 91598822 91598899 -159088955 - L2 LINE L2 -726 2588 2512 1628 197 69 42 chr2 91598899 91599025 -159088829 - MLT1C LTR MaLR 0 467 346 4717 37 14 12 chr2 91599025 91599617 -159088237 - L1PA4 LINE L1 0 6155 5563 1628 197 69 42 chr2 91599617 91599942 -159087912 - MLT1C LTR MaLR -121 346 4 997 120 0 0 chr2 91599995 91600153 -159087701 - L1P4 LINE L1 -382 5781 5624 2663 54 3 0 chr2 91600155 91600490 -159087364 - L1PA7 LINE L1 0 6154 5819 1207 165 0 84 chr2 91600493 91600742 -159087112 - AluJb SINE Alu -84 228 1 191 244 0 0 chr2 91600871 91600912 -159086942 + L2 LINE L2 3268 3308 -5 483 18 0 0 chr2 91602140 91602196 -159085658 + (CA)n Simple_repeat Simple_repeat 2 57 0 1989 112 18 0 chr2 91602715 91602991 -159084863 + AluSx SINE Alu 16 296 -16 5129 229 64 15 chr2 91603246 91603862 -159083992 - L1M4 LINE L1 -529 5655 5070 2169 101 17 3 chr2 91603862 91604159 -159083695 - AluSq SINE Alu -12 301 1 5129 229 64 15 chr2 91604159 91604352 -159083502 - L1M4 LINE L1 -1114 5070 4888 186 43 0 0 chr2 91604352 91604375 -159083479 + (TATATG)n Simple_repeat Simple_repeat 2 24 0 5129 229 64 15 chr2 91604375 91605581 -159082273 - L1M4 LINE L1 -1296 4888 3543 1506 159 8 4 chr2 91606341 91606580 -159081274 + AluSg/x SINE Alu 67 306 -4 195 179 0 0 chr2 91607041 91607080 -159080774 - MIR SINE MIR -76 186 148 3367 194 9 52 chr2 91607094 91607621 -159080233 - L1MA4 LINE L1 -1 6299 5751 345 82 0 0 chr2 91607621 91607670 -159080184 + (TA)n Simple_repeat Simple_repeat 2 50 0 3367 194 9 52 chr2 91607670 91607860 -159079994 - L1MA4 LINE L1 -549 5751 5624 2536 61 0 3 chr2 91607860 91608172 -159079682 - AluY SINE Alu 0 311 1 3367 194 9 52 chr2 91608172 91608325 -159079529 - L1MA4 LINE L1 -676 5624 5466 5791 135 35 9 chr2 91608442 91609638 -159078216 - L1MA2 LINE L1 -3 6301 5073 532 123 0 0 chr2 91609756 91609837 -159078017 - L1M1 LINE L1 -572 5732 5652 1805 295 29 28 chr2 91610375 91611115 -159076739 + L2 LINE L2 2344 3083 -230 552 88 0 10 chr2 91612824 91613085 -159074769 + AluY SINE Alu 1 311 0 2082 124 3 3 chr2 91613813 91614119 -159073735 - AluSx SINE Alu -6 306 1 4736 21 13 2 chr2 91614173 91614783 -159073071 + L1PA3 LINE L1 5585 6155 0 352 272 66 88 chr2 91614806 91615078 -159072776 + L2 LINE L2 3045 3310 -3 31 26 0 0 chr2 91615305 91615343 -159072511 + AT_rich Low_complexity Low_complexity 1 38 0 210 239 169 0 chr2 91615347 91615418 -159072436 + L2 LINE L2 3229 3311 -2 210 280 40 0 chr2 91615419 91615469 -159072385 - L2 LINE L2 -95 3177 3126 1346 284 60 21 chr2 91616200 91616736 -159071118 + L2 LINE L2 2756 3313 0 327 287 51 77 chr2 91616853 91617048 -159070806 - MIR SINE MIR -53 209 20 529 339 105 46 chr2 91617061 91617622 -159070232 - L3 LINE CR1 -258 1319 726 307 344 23 46 chr2 91618064 91618195 -159069659 + L2 LINE L2 3145 3272 0 247 230 67 42 chr2 91618271 91618436 -159069418 - L2 LINE L2 0 3272 3104 1057 191 44 117 chr2 91618650 91619017 -159068837 + MLT1C LTR MaLR 121 460 -7 470 326 47 43 chr2 91619423 91619656 -159068198 + MIR SINE MIR 29 262 0 1176 259 58 9 chr2 91620637 91620980 -159066874 + Charlie1b DNA MER1_type 6 365 -158 934 212 93 34 chr2 91620980 91621249 -159066605 - L1MD1 LINE L1 -6 6236 5952 397 224 58 45 chr2 91621347 91621503 -159066351 + Charlie1b DNA MER1_type 364 521 -2 463 223 39 0 chr2 91621519 91621622 -159066232 + MIR SINE MIR 20 126 -136 811 261 55 21 chr2 91623329 91623567 -159064287 + MIR SINE MIR 5 250 -12 236 163 0 0 chr2 91623666 91623709 -159064145 + MLT1J LTR MaLR 420 462 -49 375 355 24 24 chr2 91623720 91623889 -159063965 - MIR SINE MIR -93 169 1 403 354 88 45 chr2 91625732 91626128 -159061726 - L2 LINE L2 -4 3309 2897 2264 100 7 10 chr2 91626282 91626592 -159061262 + AluY SINE Alu 1 309 -2 800 293 104 62 chr2 91628486 91628968 -159058886 - MLT1J LTR MaLR 0 511 10 350 357 23 0 chr2 91629012 91629141 -159058713 + MIR3 SINE MIR 65 196 -12 303 315 67 56 chr2 91629320 91629498 -159058356 - L1ME3A LINE L1 -2 6168 5989 21 36 0 0 chr2 91629595 91629623 -159058231 + AT_rich Low_complexity Low_complexity 1 28 0 306 209 15 0 chr2 91629679 91629746 -159058108 - L1ME3A LINE L1 -295 5875 5808 1731 165 131 11 chr2 91629753 91630135 -159057719 - MSTA LTR MaLR 0 428 1 590 150 18 0 chr2 91630135 91630248 -159057606 - MSTA-int LTR MaLR 0 1651 1537 * 6612 152 110 8 chr2 91630237 91631051 -159056803 - MSTA-int LTR MaLR -257 1323 347 408 20 0 0 chr2 91631051 91631100 -159056754 + (TTG)n Simple_repeat Simple_repeat 2 50 0 6612 152 110 8 chr2 91631100 91631484 -159056370 - MSTA-int LTR MaLR -1233 347 3 1723 158 117 31 chr2 91631488 91631880 -159055974 - MSTA LTR MaLR -2 426 1 538 302 43 23 chr2 91631881 91632229 -159055625 - L1ME3A LINE L1 -358 5804 5450 233 204 37 19 chr2 91632394 91632448 -159055406 - L2 LINE L2 0 3313 3259 13037 180 38 36 chr2 91632568 91635127 -159052727 + L1MA2 LINE L1 16 2580 -4985 10891 186 28 44 chr2 91635147 91635977 -159051877 + L1MA2 LINE L1 3795 4636 -3087 590 180 115 16 chr2 91635977 91636099 -159051755 - AluSq/x SINE Alu -178 134 1 10891 186 28 44 chr2 91636099 91638538 -159049316 + L1MA2 LINE L1 4636 7115 -608 236 51 0 26 chr2 91638538 91638577 -159049277 + (TTTTG)n Simple_repeat Simple_repeat 1 38 0 10891 186 28 44 chr2 91638577 91639177 -159048677 + L1MA2 LINE L1 7115 7723 0 316 341 71 61 chr2 91639386 91639486 -159048368 - L2 LINE L2 -426 2888 2791 2718 29 0 6 chr2 91639486 91639799 -159048055 + AluY SINE Alu 1 311 0 316 341 71 61 chr2 91639799 91640275 -159047579 - L2 LINE L2 -523 2791 2306 * 530 311 105 5 chr2 91640267 91640486 -159047368 + MIR SINE MIR 22 262 0 194 219 109 16 chr2 91640494 91640558 -159047296 - L2 LINE L2 -985 2329 2260 610 231 28 38 chr2 91640581 91640793 -159047061 - L1MC5 LINE L1 -33 7928 7719 284 304 89 19 chr2 91640796 91640954 -159046900 - L2 LINE L2 -1068 2246 2078 2447 258 176 72 chr2 91641136 91641372 -159046482 + L2 LINE L2 1264 1474 -1840 458 36 0 0 chr2 91641372 91641428 -159046426 + MADE1 DNA Mariner 25 80 0 2447 258 176 72 chr2 91641428 91642372 -159045482 + L2 LINE L2 1474 2628 -686 351 0 0 0 chr2 91642978 91643017 -159044837 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2543 41 19 3 chr2 91643025 91643343 -159044511 - L1PA2 LINE L1 -2 6153 5831 247 336 57 25 chr2 91644372 91644494 -159043360 - MIR SINE MIR -86 176 51 276 233 55 27 chr2 91644830 91644903 -159042951 + MIR SINE MIR 47 116 -92 536 304 26 74 chr2 91646371 91646634 -159041220 - MIR SINE MIR -10 252 5 580 315 105 7 chr2 91646727 91647032 -159040822 + L2 LINE L2 87 421 -2893 360 228 87 63 chr2 91647091 91647218 -159040636 + MLT1A2 LTR MaLR 21 150 -224 690 205 13 45 chr2 91647255 91647411 -159040443 + FAM SINE Alu 22 172 -13 710 275 0 28 chr2 91647449 91647627 -159040227 + MLT1A2 LTR MaLR 186 358 -16 1354 221 19 53 chr2 91647627 91648002 -159039852 - MLT1A1 LTR MaLR 0 365 4 1773 308 137 43 chr2 91648110 91649410 -159038444 + L2 LINE L2 750 2171 -1143 335 50 89 10 chr2 91649410 91649511 -159038343 + (TA)n Simple_repeat Simple_repeat 2 110 0 317 288 62 71 chr2 91649545 91649694 -159038160 + L2 LINE L2 2187 2335 -979 1839 158 49 27 chr2 91649694 91650061 -159037793 + THE1C LTR MaLR 1 375 0 317 288 62 71 chr2 91650061 91650137 -159037717 + L2 LINE L2 2335 2410 -904 907 131 14 0 chr2 91650179 91650324 -159037530 - L1PA13 LINE L1 -19 6144 5998 490 204 0 9 chr2 91650382 91650490 -159037364 + L1P LINE L1 4651 4757 -1389 * 13496 197 32 22 chr2 91650488 91653046 -159034808 - L1PA13 LINE L1 -1509 5288 2757 2220 95 0 3 chr2 91653046 91653364 -159034490 - AluSc SINE Alu 0 317 1 13496 197 32 22 chr2 91653364 91653575 -159034279 - L1PA13 LINE L1 -4040 2757 2550 2265 71 30 10 chr2 91653575 91653870 -159033984 + AluY SINE Alu 1 301 -10 13496 197 32 22 chr2 91653870 91654262 -159033592 - L1PA13 LINE L1 -4247 2550 2092 7074 230 44 4 chr2 91654251 91655643 -159032211 - L1PA13 LINE L1 -5336 1451 5 * 1362 306 24 36 chr2 91655725 91656334 -159031520 + L2 LINE L2 2644 3309 -4 288 335 76 13 chr2 91656606 91656764 -159031090 - MIR SINE MIR -46 216 49 210 37 0 0 chr2 91657022 91657049 -159030805 + (TG)n Simple_repeat Simple_repeat 2 28 0 357 296 65 70 chr2 91657352 91657703 -159030151 - L1MC4a LINE L1 -157 5964 5616 2494 158 21 2 chr2 91657718 91658194 -159029660 - L1MA4A LINE L1 -3 7002 6518 24 0 0 0 chr2 91658194 91658218 -159029636 + AT_rich Low_complexity Low_complexity 1 24 0 5330 25 0 11 chr2 91658218 91658855 -159028999 - L1PA4 LINE L1 -3 6152 5523 2789 168 2 28 chr2 91658856 91659357 -159028497 - L1MA4A LINE L1 -484 6521 6033 1644 157 59 3 chr2 91659357 91659527 -159028327 - AluSg SINE Alu -7 303 109 402 21 0 0 chr2 91659527 91659574 -159028280 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1644 157 59 3 chr2 91659574 91659690 -159028164 - AluSg SINE Alu -201 109 1 2789 168 2 28 chr2 91659690 91659718 -159028136 - L1MA4A LINE L1 -972 6033 6006 183 80 0 0 chr2 91659760 91659785 -159028069 + (CGG)n Simple_repeat Simple_repeat 1 25 0 3689 222 12 4 chr2 91659890 91660835 -159027019 - L1MA4A LINE L1 -848 6000 5057 5322 176 18 5 chr2 91660837 91662270 -159025584 + L1PA16 LINE L1 4704 6157 -9 12800 219 39 14 chr2 91662270 91666085 -159021769 - L1MA4A LINE L1 -2932 3916 3 1127 163 88 10 chr2 91666447 91666754 -159021100 - Charlie1 DNA MER1_type -17 2744 2414 4738 136 33 18 chr2 91666819 91667598 -159020256 + LTR25 LTR ERV1 4 794 0 483 295 179 13 chr2 91667670 91667904 -159019950 - LTR33 LTR ERVL -97 424 152 281 146 41 49 chr2 91668444 91668567 -159019287 + (TA)n Simple_repeat Simple_repeat 2 123 0 196 274 27 41 chr2 91669837 91669910 -159017944 - MIR SINE MIR -115 147 76 5202 170 44 7 chr2 91670953 91672721 -159015133 - L1MA2 LINE L1 -2 6302 4475 3272 264 79 10 chr2 91672714 91674475 -159013379 - L1 LINE L1 -1908 5657 3553 * 6033 194 65 18 chr2 91674512 91676794 -159011060 - L1 LINE L1 -3980 3585 821 1863 155 106 23 chr2 91676853 91677234 -159010620 - LTR9 LTR ERV1 -224 420 2 4121 125 9 57 chr2 91677234 91677972 -159009882 + L1PA11 LINE L1 5470 6172 -2 538 189 0 0 chr2 91677972 91678062 -159009792 - L1P LINE L1 -1549 4597 4508 2317 173 30 26 chr2 91678173 91678669 -159009185 - L1MA10 LINE L1 -10 6324 5827 2204 154 16 0 chr2 91680437 91680806 -159007048 + THE1C LTR MaLR 1 375 0 539 305 67 18 chr2 91681009 91681232 -159006622 - MIR SINE MIR 0 262 29 717 298 70 35 chr2 91681396 91681958 -159005896 + L1MEc LINE L1 1737 2323 -4073 1990 211 18 56 chr2 91681958 91682526 -159005328 + LTR55 LTR ERV 1 546 -2 717 298 70 35 chr2 91682526 91682563 -159005291 + L1MEc LINE L1 2323 2357 -4039 337 170 9 104 chr2 91682575 91682681 -159005173 - L1MC4 LINE L1 -14 8028 7933 189 213 0 0 chr2 91682705 91682752 -159005102 + CT-rich Low_complexity Low_complexity 2 48 0 675 300 82 50 chr2 91682790 91683230 -159004624 - L1MC4 LINE L1 -124 7918 7465 2174 279 63 86 chr2 91683242 91683633 -159004221 + L1 LINE L1 4 402 -6447 2194 100 23 0 chr2 91683633 91683932 -159003922 - AluSx SINE Alu -6 306 1 2174 279 63 86 chr2 91683932 91684845 -159003009 + L1 LINE L1 402 1278 -5571 2020 175 61 22 chr2 91684872 91685283 -159002571 - MSTA LTR MaLR 0 428 2 7864 184 74 16 chr2 91685284 91685790 -159002064 - MSTA-int LTR MaLR 0 1651 1176 2100 117 0 10 chr2 91685790 91686089 -159001765 - AluSp SINE Alu -17 296 1 7864 184 74 16 chr2 91686089 91687143 -159000711 - MSTA-int LTR MaLR -475 1176 1 1916 184 57 45 chr2 91687143 91687566 -159000288 - MSTA LTR MaLR 0 428 1 1525 257 5 13 chr2 91687570 91687959 -158999895 + L1 LINE L1 1306 1691 -5158 * 1813 252 52 42 chr2 91687952 91688834 -158999020 + L1 LINE L1 1511 2413 -4436 3991 114 136 133 chr2 91688838 91690225 -158997629 + pTR5 LTR ERV1 743 2438 0 3098 175 25 16 chr2 91690263 91690390 -158997464 + L1PA16 LINE L1 5551 5675 -491 2013 138 0 0 chr2 91690390 91690688 -158997166 + AluY SINE Alu 1 298 -13 3098 175 25 16 chr2 91690688 91691171 -158996683 + L1PA16 LINE L1 5675 6166 0 21 0 0 0 chr2 91691174 91691195 -158996659 + AT_rich Low_complexity Low_complexity 1 21 0 1704 239 28 12 chr2 91691200 91692120 -158995734 + L1 LINE L1 2448 3381 -3467 * 2893 203 17 29 chr2 91692095 91692338 -158995516 + L1 LINE L1 5188 5432 -1416 287 49 24 0 chr2 91692338 91692379 -158995475 + (TA)n Simple_repeat Simple_repeat 2 43 0 2893 203 17 29 chr2 91692379 91692831 -158995023 + L1 LINE L1 5432 5875 -973 2076 114 0 0 chr2 91692944 91693224 -158994630 - AluSg SINE Alu -30 280 1 433 306 82 68 chr2 91693275 91693628 -158994226 - L2 LINE L2 -574 2740 2383 283 281 168 21 chr2 91693641 91693879 -158993975 + L1M2 LINE L1 4640 4912 -1936 317 316 52 11 chr2 91694028 91694376 -158993478 + L1M2 LINE L1 4990 5351 -1497 912 283 104 37 chr2 91694427 91695438 -158992416 + L1ME LINE L1 4494 5585 -577 1442 55 0 0 chr2 91695440 91695622 -158992232 + L1PA5 LINE L1 5971 6152 -2 582 86 0 0 chr2 91695962 91696043 -158991811 + (TG)n Simple_repeat Simple_repeat 2 82 0 367 78 31 0 chr2 91696500 91696564 -158991290 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 1832 167 33 17 chr2 91698049 91698408 -158989446 + MLT1A1 LTR MaLR 1 365 0 4604 196 66 14 chr2 91700074 91701032 -158986822 + L1M3f LINE L1 16 1023 -4305 2692 189 209 14 chr2 91701026 91701681 -158986173 + L1M1 LINE L1 9 791 -6774 * 214 274 55 0 chr2 91703041 91703114 -158984740 - MIR SINE MIR -22 240 164 729 258 89 127 chr2 91703122 91703557 -158984297 - MLT1E LTR MaLR -7 586 200 2612 276 31 21 chr2 91703618 91704646 -158983208 + L1P LINE L1 2236 3273 -2873 265 133 22 0 chr2 91704660 91704705 -158983149 + MLT2A1 LTR ERVL 333 378 -66 331 200 59 6 chr2 91704708 91704878 -158982976 + (TA)n Simple_repeat Simple_repeat 2 180 0 342 114 0 69 chr2 91704879 91705010 -158982844 + (TATAA)n Simple_repeat Simple_repeat 3 124 0 211 96 0 58 chr2 91705010 91705062 -158982792 + (TTAA)n Simple_repeat Simple_repeat 4 52 0 * 285 196 60 0 chr2 91705029 91705162 -158982692 + (TA)n Simple_repeat Simple_repeat 2 142 0 183 47 23 47 chr2 91705166 91705209 -158982645 + (TTATA)n Simple_repeat Simple_repeat 3 44 0 2179 82 80 17 chr2 91705209 91705561 -158982293 - MLT2A1 LTR ERVL -70 374 1 762 236 59 15 chr2 91705561 91705969 -158981885 - L1M4c LINE L1 -3797 2418 2023 1790 224 22 29 chr2 91705999 91706446 -158981408 + MLT1C LTR MaLR 4 447 -20 1441 217 35 131 chr2 91706465 91706845 -158981009 - MLT2B1 LTR ERVL -78 442 118 1481 159 45 19 chr2 91706845 91707159 -158980695 - L1MA7 LINE L1 0 6291 5970 1441 217 35 131 chr2 91707159 91707267 -158980587 - MLT2B1 LTR ERVL -402 118 1 1553 193 6 19 chr2 91707270 91707592 -158980262 + MLT1C-int LTR MaLR 157 474 -897 731 283 53 62 chr2 91707606 91707928 -158979926 - HAL1 LINE L1 -2171 336 18 273 356 106 16 chr2 91708118 91708306 -158979548 - MIR SINE MIR -44 218 14 31 26 0 0 chr2 91708359 91708397 -158979457 + AT_rich Low_complexity Low_complexity 1 38 0 284 325 33 69 chr2 91710360 91710665 -158977189 - L1ME LINE L1 -282 5839 5546 2058 166 3 27 chr2 91710736 91711109 -158976745 - THE1B LTR MaLR 0 364 1 2796 131 16 11 chr2 91711109 91711558 -158976296 - THE1B-int LTR MaLR 0 1580 1130 523 118 0 0 chr2 91711564 91711640 -158976214 - THE1B-int LTR MaLR -646 934 859 * 1753 101 0 0 chr2 91711634 91711882 -158975972 - THE1B-int LTR MaLR -1332 248 1 2191 150 14 0 chr2 91711882 91712241 -158975613 - THE1B LTR MaLR 0 364 1 723 275 74 77 chr2 91712288 91713220 -158974634 + L1ME LINE L1 1194 2143 -4578 22 35 0 0 chr2 91713268 91713297 -158974557 + AT_rich Low_complexity Low_complexity 1 29 0 454 273 70 47 chr2 91713516 91713817 -158974037 + L1ME LINE L1 2457 2699 -3841 1411 240 44 51 chr2 91713846 91713970 -158973884 + L1ME LINE L1 5598 5721 -835 1356 205 60 11 chr2 91713970 91714265 -158973589 + AluJo SINE Alu 1 308 0 1411 240 44 51 chr2 91714265 91714658 -158973196 + L1ME LINE L1 5721 6124 -432 1144 210 18 4 chr2 91714684 91714960 -158972894 + L1MA7 LINE L1 6003 6282 -9 180 111 0 0 chr2 91715035 91715062 -158972792 + (TAA)n Simple_repeat Simple_repeat 2 28 0 22 35 0 0 chr2 91715162 91715191 -158972663 + AT_rich Low_complexity Low_complexity 1 29 0 2037 268 131 11 chr2 91715197 91716499 -158971355 + L1ME LINE L1 3985 5493 -1047 1395 211 23 44 chr2 91716512 91716757 -158971097 + L1PA13 LINE L1 1911 2160 -4637 1534 151 188 105 chr2 91716757 91717300 -158970554 - LTR4 LTR ERV1 0 588 1 1395 211 23 44 chr2 91717300 91717553 -158970301 + L1PA13 LINE L1 2160 2414 -4383 524 160 24 8 chr2 91717555 91717680 -158970174 + GA-rich Low_complexity Low_complexity 3 129 0 5221 260 27 6 chr2 91717681 91719416 -158968438 + L1M1 LINE L1 2716 4904 -2661 684 107 49 16 chr2 91719550 91719672 -158968182 + AluY SINE Alu 7 132 -179 21 0 0 0 chr2 91719672 91719693 -158968161 + AT_rich Low_complexity Low_complexity 1 21 0 262 279 8 33 chr2 91719696 91719818 -158968036 + L1ME3A LINE L1 6044 6162 -8 261 301 0 0 chr2 91719917 91719990 -158967864 + (CATATA)n Simple_repeat Simple_repeat 4 76 0 1256 102 0 0 chr2 91720015 91720181 -158967673 + AluSc SINE Alu 134 299 -10 523 175 0 19 chr2 91720312 91720415 -158967439 - FRAM SINE Alu -8 168 68 331 320 40 45 chr2 91720518 91720740 -158967114 - L1M4 LINE L1 -3061 3085 2865 200 301 73 59 chr2 91720878 91721014 -158966840 - L2 LINE L2 -8 3305 3168 196 391 40 7 chr2 91721476 91721627 -158966227 + L2 LINE L2 1797 1952 -1362 314 312 65 65 chr2 91721684 91721838 -158966016 + L2 LINE L2 3110 3263 -9 1621 228 11 8 chr2 91722015 91722379 -158965475 - MLT1A1 LTR MaLR 0 365 1 250 296 0 0 chr2 91723714 91723785 -158964069 + (TATATG)n Simple_repeat Simple_repeat 6 76 0 395 306 17 23 chr2 91723884 91724057 -158963797 - L1ME3A LINE L1 -8 6162 5991 1242 203 46 63 chr2 91724084 91724203 -158963651 + MLT1A1 LTR MaLR 4 124 -241 1256 208 25 113 chr2 91724203 91724603 -158963251 + MLT1A1 LTR MaLR 1 365 0 1242 203 46 63 chr2 91724603 91724833 -158963021 + MLT1A1 LTR MaLR 124 347 -18 5111 181 16 45 chr2 91724877 91725932 -158961922 + ERVL-B3 LTR ERVL 4728 5752 -12 2027 268 13 25 chr2 91725937 91726455 -158961399 + MLT2B3 LTR ERVL 1 513 -41 372 48 48 0 chr2 91726455 91726518 -158961336 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 2027 268 13 25 chr2 91726518 91726552 -158961302 + MLT2B3 LTR ERVL 513 546 -8 931 220 72 12 chr2 91726560 91726810 -158961044 - L1M4 LINE L1 -747 5399 5135 978 274 0 5 chr2 91728324 91728547 -158959307 + HUERS-P2 LTR ERV1 289 510 -2578 2067 212 52 56 chr2 91728650 91729187 -158958667 + HUERS-P2 LTR ERV1 562 1096 -1992 1037 95 14 0 chr2 91729235 91729383 -158958471 + L1MA2 LINE L1 6155 6304 0 193 73 24 24 chr2 91729614 91729655 -158958199 + (TATAA)n Simple_repeat Simple_repeat 5 45 0 1016 87 0 0 chr2 91729672 91729799 -158958055 - AluSq/x SINE Alu -185 127 1 293 368 29 37 chr2 91729823 91729959 -158957895 - L2 LINE L2 -11 3261 3127 228 302 0 0 chr2 91730005 91730058 -158957796 + L2 LINE L2 3246 3298 -15 1170 305 74 27 chr2 91730160 91730893 -158956961 + L2 LINE L2 2536 3309 -4 181 260 50 80 chr2 91731226 91731297 -158956557 - L3 LINE CR1 -499 1078 1011 655 260 153 7 chr2 91731297 91731578 -158956276 - MER5C DNA MER1_type -2 322 1 315 361 65 19 chr2 91731684 91731900 -158955954 + L2 LINE L2 1954 2179 -1135 1310 268 24 58 chr2 91731983 91732484 -158955370 + MER74B LTR ERVL 56 539 -83 531 361 63 40 chr2 91732572 91732971 -158954883 + L2 LINE L2 2316 2723 -591 858 350 73 36 chr2 91733192 91733435 -158954419 + L1MEc LINE L1 142 375 -6021 2409 71 3 0 chr2 91733435 91733731 -158954123 + AluSp SINE Alu 3 299 -14 858 350 73 36 chr2 91733731 91734314 -158953540 + L1MEc LINE L1 375 998 -5398 20072 168 28 20 chr2 91734363 91734622 -158953232 - L1PA11 LINE L1 -3 6171 5916 2070 128 0 0 chr2 91734622 91734910 -158952944 - AluSg SINE Alu -22 288 1 20072 168 28 20 chr2 91734910 91735424 -158952430 - L1PA11 LINE L1 -258 5916 5408 2220 147 5 16 chr2 91735424 91735792 -158952062 - THE1B LTR MaLR 0 364 1 20072 168 28 20 chr2 91735792 91737517 -158950337 - L1PA11 LINE L1 -766 5408 3698 183 42 0 0 chr2 91737517 91737541 -158950313 + (TTG)n Simple_repeat Simple_repeat 2 25 0 20072 168 28 20 chr2 91737541 91737979 -158949875 - L1PA11 LINE L1 -2476 3698 3265 180 0 0 0 chr2 91737979 91737999 -158949855 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 20072 168 28 20 chr2 91737999 91739370 -158948484 - L1PA11 LINE L1 -2909 3265 1828 2363 91 0 7 chr2 91739370 91739678 -158948176 + AluY SINE Alu 1 306 -5 20072 168 28 20 chr2 91739678 91740301 -158947553 - L1PA11 LINE L1 -4346 1828 1211 2846 198 45 24 chr2 91740307 91740980 -158946874 - L1MA6 LINE L1 -21 6279 5593 4998 153 15 24 chr2 91740993 91741921 -158945933 - L1MA2 LINE L1 -1 6303 5384 1142 217 26 7 chr2 91742104 91742413 -158945441 - L1MA2 LINE L1 -763 5383 5069 1352 214 33 39 chr2 91742413 91742756 -158945098 - MSTB LTR MaLR 0 426 53 3751 209 17 40 chr2 91742756 91743571 -158944283 - MSTB-int LTR MaLR -29 1622 827 1289 161 5 0 chr2 91743566 91743783 -158944071 - MSTB-int LTR MaLR -1433 218 1 * 1692 192 106 28 chr2 91743783 91744178 -158943676 - MSTB LTR MaLR 0 426 1 3422 224 23 2 chr2 91744178 91745009 -158942845 - L1MA2 LINE L1 -1073 5073 4226 * 8006 225 31 38 chr2 91745006 91747048 -158940806 + L1M1 LINE L1 3069 5158 -2407 257 254 0 0 chr2 91747048 91747103 -158940751 + Tigger5 DNA MER2_type 1 55 -2268 8006 225 31 38 chr2 91747103 91747571 -158940283 + L1M1 LINE L1 5158 5628 -1937 24 0 0 0 chr2 91747724 91747748 -158940106 + AT_rich Low_complexity Low_complexity 1 24 0 772 326 85 28 chr2 91747813 91748526 -158939328 + L2 LINE L2 2562 3313 0 334 220 66 11 chr2 91748638 91748729 -158939125 + MER63 DNA MER1_type 8 729 -107 576 313 31 0 chr2 91748803 91748995 -158938859 - MIR SINE MIR -62 200 3 33 25 0 0 chr2 91749091 91749131 -158938723 + AT_rich Low_complexity Low_complexity 1 40 0 602 326 99 12 chr2 91751357 91751599 -158936255 - MLT1J LTR MaLR -69 442 180 2284 134 261 13 chr2 91752623 91753145 -158934709 + MER4-int LTR ERV1 36 686 -5912 281 26 26 0 chr2 91753225 91753263 -158934591 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 885 173 69 15 chr2 91753317 91753519 -158934335 + MER4-int LTR ERV1 1275 1487 -5111 446 184 19 68 chr2 91753520 91753623 -158934231 + MER4A LTR ERV1 1 98 -566 1568 144 3 82 chr2 91753623 91753973 -158933881 + MER4A LTR ERV1 261 641 -23 1426 147 5 0 chr2 91753973 91754197 -158933657 + MER41C LTR ERV1 330 554 0 832 282 107 7 chr2 91754812 91755259 -158932595 - HAL1 LINE L1 0 2507 2016 1707 212 72 76 chr2 91755608 91756230 -158931624 + MLT1E3 LTR MaLR 1 620 -4 1879 128 10 3 chr2 91759473 91759778 -158928076 - L1PA10 LINE L1 -3 6165 5859 21 0 0 0 chr2 91760410 91760431 -158927423 + AT_rich Low_complexity Low_complexity 1 21 0 1852 132 63 30 chr2 91760525 91760888 -158926966 + THE1C LTR MaLR 1 375 0 5987 104 308 47 chr2 91760888 91762141 -158925713 + THE1C-int LTR MaLR 1 1580 0 1986 125 49 33 chr2 91762141 91762508 -158925346 + THE1C LTR MaLR 1 373 -2 298 274 29 29 chr2 91762560 91762662 -158925192 + L2 LINE L2 2240 2341 -973 440 339 117 55 chr2 91762665 91763314 -158924540 + L2 LINE L2 2579 3272 0 311 316 38 44 chr2 91765557 91765715 -158922139 - MER117 DNA MER1_type -35 162 6 415 242 0 0 chr2 91767511 91767606 -158920248 - L1MB7 LINE L1 -19 6165 6071 237 268 14 0 chr2 91767692 91767763 -158920091 + (TA)n Simple_repeat Simple_repeat 1 72 0 26 82 0 0 chr2 91767787 91767848 -158920006 + AT_rich Low_complexity Low_complexity 1 61 0 198 255 20 61 chr2 91767995 91768093 -158919761 - MIR SINE MIR -70 192 99 361 294 112 6 chr2 91768497 91768667 -158919187 + MIR SINE MIR 53 240 -22 808 163 0 7 chr2 91768803 91768938 -158918916 + AluJb SINE Alu 161 294 -18 22 0 0 0 chr2 91771190 91771212 -158916642 + AT_rich Low_complexity Low_complexity 1 22 0 1222 222 89 22 chr2 91772139 91772454 -158915400 - MER2 DNA MER2_type -9 336 1 230 200 22 0 chr2 91774229 91774274 -158913580 + MER69 DNA AcHobo 2480 2525 -1 182 290 145 0 chr2 91774278 91774340 -158913514 - MIR SINE MIR -112 150 80 23 33 0 0 chr2 91774538 91774568 -158913286 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr2 91774613 91774638 -158913216 + AT_rich Low_complexity Low_complexity 1 25 0 1987 55 0 4 chr2 91774799 91775053 -158912801 + L1PA4 LINE L1 5903 6155 0 37 0 0 0 chr2 91775434 91775471 -158912383 + AT_rich Low_complexity Low_complexity 1 37 0 192 346 75 19 chr2 91775599 91775706 -158912148 + MIR SINE MIR 32 144 -64 279 303 0 0 chr2 91775928 91775994 -158911860 - L2 LINE L2 -1 3312 3247 1866 110 4 0 chr2 91776407 91776671 -158911183 + AluSp SINE Alu 47 311 -2 330 182 0 0 chr2 91776749 91776815 -158911039 + (TA)n Simple_repeat Simple_repeat 2 67 0 226 119 0 0 chr2 91776822 91776864 -158910990 - LTR66 LTR ERVL -171 439 398 292 135 0 0 chr2 91776864 91776916 -158910938 + L1MC4 LINE L1 6652 6703 -1339 232 247 0 72 chr2 91776888 91776985 -158910869 - L1MC4 LINE L1 -1339 6703 6614 * 266 161 54 0 chr2 91776991 91777047 -158910807 + LTR66 LTR ERVL 394 452 -158 254 273 30 0 chr2 91777266 91777332 -158910522 + GA-rich Low_complexity Low_complexity 3 70 0 1054 312 57 26 chr2 91777697 91777823 -158910031 - L2 LINE L2 -1 3312 3191 2369 128 78 2 chr2 91777823 91778221 -158909633 + MSTA LTR MaLR 1 428 0 1054 312 57 26 chr2 91778221 91778681 -158909173 - L2 LINE L2 -122 3191 2711 792 236 0 0 chr2 91778691 91778848 -158909006 - FRAM SINE Alu -19 157 1 594 316 167 32 chr2 91778853 91779195 -158908659 - L2 LINE L2 -603 2711 2324 317 293 0 0 chr2 91779628 91779710 -158908144 - MIR SINE MIR -13 249 168 336 310 70 70 chr2 91779711 91779995 -158907859 - LTR67 LTR ERVL -2 555 272 531 225 19 92 chr2 91780541 91780717 -158907137 + MIR SINE MIR 42 203 -59 220 337 0 59 chr2 91781094 91781195 -158906659 - MIR SINE MIR 0 262 168 248 356 59 22 chr2 91781799 91781934 -158905920 + MIR3 SINE MIR 42 181 -27 345 333 97 11 chr2 91782144 91782330 -158905524 + MIR SINE MIR 5 206 -56 201 374 43 25 chr2 91782632 91782795 -158905059 + MER5A DNA MER1_type 24 189 0 180 295 186 45 chr2 91782795 91782911 -158904943 - MIR3 SINE MIR -51 157 20 2349 87 0 3 chr2 91783484 91783793 -158904061 + AluSg SINE Alu 1 308 -2 276 293 127 25 chr2 91784105 91784262 -158903592 + MIR3 SINE MIR 20 192 -16 185 234 149 0 chr2 91785313 91785360 -158902494 + L2 LINE L2 3243 3296 -17 24 0 0 0 chr2 91786337 91786361 -158901493 + AT_rich Low_complexity Low_complexity 1 24 0 358 294 196 0 chr2 91786564 91786727 -158901127 - MIR SINE MIR -35 227 33 3367 83 14 0 chr2 91786929 91787680 -158900174 - L1PA8A LINE L1 -427 5704 4947 3153 90 5 2 chr2 91787680 91788100 -158899754 + L1PA8A LINE L1 5697 6129 -2 24 96 0 0 chr2 91788187 91788260 -158899594 + AT_rich Low_complexity Low_complexity 1 73 0 278 218 0 0 chr2 91788724 91788779 -158899075 - L2 LINE L2 -17 3296 3242 23 68 0 0 chr2 91789363 91789407 -158898447 + AT_rich Low_complexity Low_complexity 1 44 0 18834 184 15 12 chr2 91789517 91790946 -158896908 - L1PA13 LINE L1 -3 6811 5388 348 24 0 0 chr2 91790946 91790987 -158896867 + (TG)n Simple_repeat Simple_repeat 2 42 0 18834 184 15 12 chr2 91790987 91793021 -158894833 - L1PA13 LINE L1 -1426 5388 3323 2637 94 11 11 chr2 91793021 91793394 -158894460 + THE1C LTR MaLR 1 373 -2 18834 184 15 12 chr2 91793394 91794808 -158893046 - L1PA13 LINE L1 -3491 3323 1915 473 233 31 63 chr2 91794836 91794995 -158892859 - L2 LINE L2 -1 3312 3159 1599 151 0 17 chr2 91795129 91795420 -158892434 - L1PA13 LINE L1 -4734 2053 1768 219 366 83 59 chr2 91796958 91797212 -158890642 - L2 LINE L2 -461 2853 2594 1446 324 50 0 chr2 91797304 91797783 -158890071 - L2 LINE L2 -2151 1163 661 203 147 0 0 chr2 91798247 91798281 -158889573 + (CA)n Simple_repeat Simple_repeat 1 34 0 255 308 60 49 chr2 91798450 91798635 -158889219 - L2 LINE L2 0 3313 3127 594 228 7 8 chr2 91798743 91798916 -158888938 + L1PA15 LINE L1 3964 4135 -2011 2784 162 10 2 chr2 91798946 91800120 -158887734 + L1PA15 LINE L1 4854 6165 0 1241 279 20 15 chr2 91800282 91800683 -158887171 + MLT1C LTR MaLR 65 467 0 542 270 85 17 chr2 91800687 91801050 -158886804 + L1ME1 LINE L1 5794 6182 -2 2012 185 56 19 chr2 91801245 91801655 -158886199 + MSTB LTR MaLR 1 425 -1 24 32 0 0 chr2 91801671 91801702 -158886152 + AT_rich Low_complexity Low_complexity 1 31 0 739 43 0 0 chr2 91801705 91801799 -158886055 - L1PA3 LINE L1 -2638 3508 3415 15832 24 0 0 chr2 91801799 91804429 -158883425 + L1PA3 LINE L1 3519 6152 -3 24 0 0 0 chr2 91804429 91804453 -158883401 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr2 91804555 91804583 -158883271 + AT_rich Low_complexity Low_complexity 1 28 0 339 288 60 73 chr2 91804922 91805290 -158882564 - L1M4 LINE L1 -1713 4433 4071 542 251 76 23 chr2 91805359 91805530 -158882324 + MIR SINE MIR 66 245 -17 393 210 0 0 chr2 91806370 91806451 -158881403 - L1MB7 LINE L1 0 6184 6104 934 101 0 0 chr2 91806551 91806670 -158881184 - AluSc SINE Alu -188 121 3 638 165 266 6 chr2 91806703 91806861 -158880993 - L1PA16 LINE L1 -5 6161 5963 25 0 0 0 chr2 91807132 91807157 -158880697 + AT_rich Low_complexity Low_complexity 1 25 0 284 0 28 0 chr2 91807730 91807766 -158880088 + (TG)n Simple_repeat Simple_repeat 1 37 0 233 200 0 0 chr2 91809069 91809143 -158878711 + (TGAA)n Simple_repeat Simple_repeat 1 74 0 2432 206 39 20 chr2 91809414 91809976 -158877878 + L1MB5 LINE L1 5602 6174 0 2152 112 0 0 chr2 91809983 91810277 -158877577 + AluSg SINE Alu 1 294 -16 2140 103 7 0 chr2 91810279 91810601 -158877253 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 91811006 91811029 -158876825 + AT_rich Low_complexity Low_complexity 1 23 0 1317 297 85 27 chr2 91811290 91811926 -158875928 + L2 LINE L2 2639 3311 -2 1514 196 6 22 chr2 91812082 91812399 -158875455 - AluJo SINE Alu 0 312 1 373 299 19 48 chr2 91812399 91812598 -158875256 - HAL1 LINE L1 -1352 1155 961 2119 100 0 4 chr2 91812974 91813280 -158874574 - AluSg SINE Alu 0 307 3 2243 146 17 41 chr2 91813509 91813724 -158874130 - L1MC2 LINE L1 -441 5903 5701 1446 157 35 29 chr2 91813724 91813873 -158873981 - L1MA9 LINE L1 -1 6311 6164 249 33 0 0 chr2 91813873 91813903 -158873951 + (TG)n Simple_repeat Simple_repeat 2 31 0 1446 157 35 29 chr2 91813903 91814066 -158873788 - L1MA9 LINE L1 -148 6164 5997 2243 146 17 41 chr2 91814066 91814261 -158873593 - L1MC2 LINE L1 -643 5701 5503 1756 149 7 4 chr2 91814517 91814798 -158873056 - AluSx SINE Alu -30 282 1 487 291 87 15 chr2 91815098 91815304 -158872550 - MIR SINE MIR -25 237 17 264 293 67 0 chr2 91866400 91866475 -158821379 - L2 LINE L2 0 3313 3234 1725 122 12 0 chr2 91866489 91866734 -158821120 - AluSx SINE Alu -29 283 36 24 32 0 0 chr2 91867127 91867158 -158820696 + AT_rich Low_complexity Low_complexity 1 31 0 813 178 7 0 chr2 91867274 91867409 -158820445 + AluJo SINE Alu 1 136 -176 2190 117 0 3 chr2 91867576 91867875 -158819979 + AluSx SINE Alu 1 298 -14 525 186 77 70 chr2 91867876 91868032 -158819822 + L1ME LINE L1 5667 5823 -341 828 195 106 31 chr2 91868588 91868814 -158819040 + MIR SINE MIR 20 262 0 564 299 198 22 chr2 91869609 91870280 -158817574 + L2 LINE L2 2462 3265 -48 233 363 112 19 chr2 91870586 91870845 -158817009 + L2 LINE L2 2985 3267 -5 210 300 44 11 chr2 91871177 91871267 -158816587 - MIR3 SINE MIR -25 183 91 928 160 13 0 chr2 91871981 91872131 -158815723 + AluJb SINE Alu 147 298 -14 642 294 82 25 chr2 91872282 91872636 -158815218 + L1M4 LINE L1 4477 4850 -1296 377 227 0 0 chr2 91872657 91872732 -158815122 + U13 snRNA snRNA 1 75 -29 198 0 0 0 chr2 91872765 91872787 -158815067 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 5167 140 25 25 chr2 91872849 91873693 -158814161 + MER21B LTR ERV1 1 844 -19 2022 148 0 10 chr2 91873820 91874117 -158813737 - AluSx SINE Alu -18 294 1 2233 114 3 10 chr2 91874127 91874435 -158813419 - AluSx SINE Alu -6 306 1 1264 113 5 16 chr2 91874504 91874690 -158813164 + MER20 DNA MER1_type 36 219 0 709 89 0 0 chr2 91874744 91874845 -158813009 + AluSg/x SINE Alu 205 305 -7 313 273 182 26 chr2 91874998 91875229 -158812625 + L1M2 LINE L1 5293 5559 -753 2419 84 0 10 chr2 91875239 91875548 -158812306 + AluSg SINE Alu 5 310 0 1246 88 6 0 chr2 91875550 91875709 -158812145 + AluSq SINE Alu 136 295 -18 372 276 39 120 chr2 91875709 91876141 -158811713 + L1ME3A LINE L1 5554 5950 -220 21 0 0 0 chr2 91876507 91876528 -158811326 + AT_rich Low_complexity Low_complexity 1 21 0 200 269 32 43 chr2 91876709 91876802 -158811052 + MIR SINE MIR 63 154 -108 275 118 53 0 chr2 91876820 91876896 -158810958 + (TA)n Simple_repeat Simple_repeat 1 80 0 987 199 9 40 chr2 91878770 91878996 -158808858 + AluJo SINE Alu 86 304 -8 2092 141 3 0 chr2 91879008 91879305 -158808549 + AluSx SINE Alu 1 298 -14 1687 209 54 54 chr2 91879306 91879656 -158808198 + L1ME2 LINE L1 5667 6019 -145 2140 106 32 0 chr2 91879656 91879939 -158807915 + AluSg SINE Alu 1 292 -18 1687 209 54 54 chr2 91879939 91880086 -158807768 + L1ME2 LINE L1 6018 6164 0 2358 98 0 3 chr2 91880119 91880424 -158807430 + AluSq SINE Alu 1 304 -9 229 177 16 97 chr2 91881005 91881067 -158806787 + MIR SINE MIR 170 226 -36 641 223 123 55 chr2 91881274 91881566 -158806288 + MLT1J1 LTR MaLR 1 312 -134 233 305 102 8 chr2 91882401 91882519 -158805335 - MIR SINE MIR -3 259 131 227 77 0 26 chr2 91882621 91882660 -158805194 + (CCCCCA)n Simple_repeat Simple_repeat 5 42 0 2300 80 7 0 chr2 91883124 91883440 -158804414 - AluSx SINE Alu 0 318 1 545 238 142 29 chr2 91884943 91885227 -158802627 - L1M1 LINE L1 -359 5803 5541 242 202 394 0 chr2 91885840 91885944 -158801910 - L1ME4a LINE L1 -11 6110 5966 245 167 30 64 chr2 91886049 91886137 -158801717 - L1P4 LINE L1 -369 5796 5707 23 92 0 0 chr2 91886625 91886690 -158801164 + AT_rich Low_complexity Low_complexity 1 65 0 2268 124 3 0 chr2 91886834 91887140 -158800714 + AluSx SINE Alu 1 307 -5 660 135 0 103 chr2 91887534 91887660 -158800194 + AluJb SINE Alu 174 286 -26 261 247 146 51 chr2 91887701 91888056 -158799798 - L2 LINE L2 -171 3142 2750 1843 73 0 0 chr2 91888107 91888326 -158799528 - AluSq SINE Alu -94 219 1 282 239 74 117 chr2 91888394 91888562 -158799292 - L2 LINE L2 -611 2703 2546 2591 64 3 0 chr2 91888562 91888874 -158798980 - AluSp SINE Alu 0 313 1 282 239 74 117 chr2 91888874 91888935 -158798919 - L2 LINE L2 -768 2546 2484 591 122 102 0 chr2 91888951 91889049 -158798805 + FRAM SINE Alu 69 176 0 189 264 143 33 chr2 91889181 91889272 -158798582 - MIR SINE MIR -51 211 111 395 242 25 33 chr2 91889279 91889399 -158798455 + MIR SINE MIR 22 140 -122 22 0 0 0 chr2 91889782 91889804 -158798050 + AT_rich Low_complexity Low_complexity 1 22 0 342 298 27 31 chr2 91890876 91891101 -158796753 + L1M4 LINE L1 4917 5140 -1006 2270 108 0 13 chr2 91891301 91891615 -158796239 - AluSg SINE Alu 0 310 1 416 196 119 40 chr2 91891685 91891842 -158796012 + LTR41 LTR ERVL 1 179 -616 1156 164 70 12 chr2 91892137 91892381 -158795473 + MER58 DNA MER1_type 2163 2420 0 2153 113 0 7 chr2 91892442 91892742 -158795112 + AluSx SINE Alu 1 298 -14 2283 117 0 0 chr2 91892751 91893051 -158794803 + AluSx SINE Alu 1 300 -12 323 115 0 0 chr2 91893051 91893103 -158794751 - Alu SINE Alu -3 299 248 403 107 27 0 chr2 91893203 91893278 -158794576 + GA-rich Low_complexity Low_complexity 2 78 0 195 42 0 0 chr2 91893284 91893308 -158794546 + (GGAGA)n Simple_repeat Simple_repeat 5 28 0 2225 86 0 4 chr2 91893328 91893606 -158794248 + AluSc SINE Alu 22 298 -11 2530 161 53 41 chr2 91893891 91894381 -158793473 + MLT1D LTR MaLR 2 497 -8 1647 252 70 50 chr2 91894410 91895029 -158792825 - MER20B DNA MER1_type -37 746 116 445 252 27 0 chr2 91895217 91895328 -158792526 - MER20B DNA MER1_type -669 114 1 1508 209 61 106 chr2 91895378 91895405 -158792449 + LTR9 LTR ERV1 1 28 -584 2431 101 0 0 chr2 91895405 91895711 -158792143 + AluSx SINE Alu 1 306 -6 1508 209 61 106 chr2 91895711 91896324 -158791530 + LTR9 LTR ERV1 28 612 0 2064 116 3 23 chr2 91896375 91896678 -158791176 + AluSq SINE Alu 1 297 -16 1508 190 0 11 chr2 91897889 91897953 -158789901 + MER58B DNA MER1_type 61 124 -2296 1704 189 3 3 chr2 91897953 91898254 -158789600 + AluJb SINE Alu 1 301 -11 1508 190 0 11 chr2 91898254 91898473 -158789381 + MER58B DNA MER1_type 124 341 0 1895 152 10 3 chr2 91898904 91899200 -158788654 + AluJo SINE Alu 1 298 -14 2203 100 0 0 chr2 91899202 91899504 -158788350 + AluSc SINE Alu 6 307 0 285 269 67 49 chr2 91900053 91900279 -158787575 + L1ME LINE L1 5635 5864 -300 1963 163 7 0 chr2 91900491 91900797 -158787057 + AluSq SINE Alu 1 308 -5 265 314 93 17 chr2 91901024 91901142 -158786712 - L1ME LINE L1 -462 5708 5582 514 265 15 7 chr2 91901374 91901510 -158786344 - MER117 DNA MER1_type -57 140 4 2231 113 0 0 chr2 91901984 91902277 -158785577 - AluSx SINE Alu -18 294 2 471 187 101 22 chr2 91902401 91902540 -158785314 + MER104 DNA Tc2 1 150 -30 526 296 101 25 chr2 91902596 91902736 -158785118 - L1ME4a LINE L1 -224 5897 5769 3645 160 7 2 chr2 91902736 91903342 -158784512 - L1PA16 LINE L1 -7 6159 5551 526 296 101 25 chr2 91903342 91903688 -158784166 - L1ME4a LINE L1 -352 5769 5374 231 236 153 0 chr2 91903766 91903838 -158784016 + L2 LINE L2 3186 3268 -4 183 205 0 0 chr2 91903839 91903878 -158783976 + GA-rich Low_complexity Low_complexity 2 40 0 721 147 0 17 chr2 91903878 91903994 -158783860 - AluSq/x SINE Alu -198 115 2 1393 181 89 6 chr2 91903996 91904407 -158783447 - MLT1D LTR MaLR -4 501 1 1905 155 3 16 chr2 91905359 91905669 -158782185 - AluJb SINE Alu -6 306 1 206 348 94 36 chr2 91905977 91906037 -158781817 + L2 LINE L2 3122 3177 -95 2368 70 0 29 chr2 91906037 91906350 -158781504 - AluY SINE Alu -7 304 1 206 348 94 36 chr2 91906350 91906427 -158781427 + L2 LINE L2 3177 3267 -5 252 246 18 0 chr2 91906429 91906486 -158781368 + GA-rich Low_complexity Low_complexity 3 60 0 1957 156 0 19 chr2 91906551 91906858 -158780996 + AluJo SINE Alu 1 301 -11 2441 82 0 3 chr2 91907548 91907854 -158780000 - AluSx SINE Alu -7 305 1 214 313 38 0 chr2 91908038 91908118 -158779736 - MIR SINE MIR -17 245 163 431 274 9 0 chr2 91908233 91908339 -158779515 - MIR SINE MIR -108 154 48 232 212 61 15 chr2 91908469 91908535 -158779319 - MER5A DNA MER1_type -8 181 113 * 419 194 218 8 chr2 91908480 91908604 -158779250 + MER5A DNA MER1_type 34 183 -6 219 304 43 0 chr2 91909039 91909108 -158778746 + L3 LINE CR1 613 684 -893 2204 217 117 35 chr2 91909307 91909393 -158778461 + MER97c DNA MER1_type? 13 91 -999 2187 89 0 3 chr2 91909393 91909675 -158778179 + AluSg SINE Alu 26 306 -4 2204 217 117 35 chr2 91909675 91910211 -158777643 + MER97c DNA MER1_type? 91 686 -404 301 288 129 0 chr2 91910535 91910698 -158777156 + L3 LINE CR1 676 859 -718 2372 95 0 0 chr2 91910735 91911031 -158776823 - AluSx SINE Alu -16 296 1 548 203 62 8 chr2 91911031 91911159 -158776695 + L1MA10 LINE L1 6199 6333 -1 2241 116 3 0 chr2 91911263 91911565 -158776289 - AluSx SINE Alu -9 303 1 581 303 57 30 chr2 91912505 91912769 -158775085 + L3 LINE CR1 1143 1413 -164 4312 141 42 72 chr2 91912885 91912995 -158774859 - MER21B LTR ERV1 -58 805 693 2589 52 0 3 chr2 91912995 91913304 -158774550 - AluY SINE Alu -3 308 1 2303 102 0 0 chr2 91913307 91913602 -158774252 - AluSx SINE Alu -17 295 1 4312 141 42 72 chr2 91913602 91914001 -158773853 - MER21B LTR ERV1 -172 691 282 207 0 0 0 chr2 91914001 91914024 -158773830 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2004 118 0 0 chr2 91914024 91914296 -158773558 - AluSg SINE Alu -35 275 4 4312 141 42 72 chr2 91914296 91914610 -158773244 - MER21B LTR ERV1 -579 284 1 3020 174 51 82 chr2 91915148 91915368 -158772486 + MER72 LTR ERV1 1 226 -496 1536 159 7 83 chr2 91915368 91915519 -158772335 + AluJb SINE Alu 1 119 -193 2254 107 3 0 chr2 91915519 91915810 -158772044 + AluSp SINE Alu 1 292 -21 1536 159 7 83 chr2 91915810 91915960 -158771894 + AluJb SINE Alu 119 279 -33 3020 174 51 82 chr2 91915960 91916199 -158771655 + MER72 LTR ERV1 226 471 -251 2145 206 31 74 chr2 91916199 91916778 -158771076 + MLT2B3 LTR ERVL 1 554 0 3020 174 51 82 chr2 91916778 91917062 -158770792 + MER72 LTR ERV1 471 722 0 326 274 24 0 chr2 91917102 91917186 -158770668 - LTR24B LTR ERV1 -9 567 482 * 1388 85 0 163 chr2 91917179 91917462 -158770392 + Tigger1 DNA MER2_type 1595 1831 -587 622 239 94 13 chr2 91917462 91917696 -158770158 + L1MEc LINE L1 2179 2406 -3809 860 201 6 12 chr2 91917837 91918006 -158769848 - AluJb SINE Alu -8 304 137 815 255 57 0 chr2 91918008 91918200 -158769654 - MER58C DNA MER1_type -8 207 5 427 222 19 0 chr2 91918204 91918312 -158769542 + L1MEc LINE L1 3967 4076 -2139 924 284 26 46 chr2 91918322 91918737 -158769117 - L1MDa LINE L1 -6103 437 31 2124 97 3 27 chr2 91919026 91919324 -158768530 - AluY SINE Alu -20 291 1 1635 170 4 4 chr2 91919484 91919749 -158768105 + AluJb SINE Alu 40 304 -8 477 257 169 6 chr2 91920707 91920890 -158766964 - MIR SINE MIR 0 262 50 2181 118 0 10 chr2 91922043 91922340 -158765514 - AluSx SINE Alu -18 294 1 865 200 71 13 chr2 91922677 91922832 -158765022 - FAM SINE Alu -21 164 1 2107 142 0 0 chr2 91923963 91924259 -158763595 + AluSx SINE Alu 2 297 -15 468 35 0 0 chr2 91924259 91924317 -158763537 + (TA)n Simple_repeat Simple_repeat 2 59 0 22 0 0 0 chr2 91924419 91924441 -158763413 + AT_rich Low_complexity Low_complexity 1 22 0 21 89 0 0 chr2 91924886 91924942 -158762912 + AT_rich Low_complexity Low_complexity 1 56 0 1479 180 18 21 chr2 91925373 91925656 -158762198 + AluJo SINE Alu 1 282 -30 2233 112 7 0 chr2 91925934 91926229 -158761625 - AluSq SINE Alu -16 297 1 455 282 48 0 chr2 91926233 91926357 -158761497 + MER94 DNA DNA 5 134 0 2092 128 3 0 chr2 91926394 91926692 -158761162 + AluSg SINE Alu 1 299 -11 2519 76 0 0 chr2 91927874 91928175 -158759679 - AluY SINE Alu -10 301 1 1008 278 97 34 chr2 91928744 91929364 -158758490 + L2 LINE L2 2650 3310 -3 1866 163 0 0 chr2 91929478 91929784 -158758070 - AluSx SINE Alu 0 308 3 210 306 174 25 chr2 91930360 91930481 -158757373 - L2 LINE L2 -609 2705 2567 243 310 97 21 chr2 91930556 91930701 -158757153 + L1ME3A LINE L1 5792 5947 -223 1835 118 7 56 chr2 91931178 91931483 -158756371 + AluJb SINE Alu 1 290 -22 195 100 0 0 chr2 91932194 91932224 -158755630 + (CGG)n Simple_repeat Simple_repeat 1 30 0 27 0 0 0 chr2 91932336 91932363 -158755491 + GC_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr2 91932401 91932430 -158755424 + GC_rich Low_complexity Low_complexity 1 29 0 1013 103 19 6 chr2 91932984 91933140 -158754714 - FRAM SINE Alu -26 150 1 3156 175 69 11 chr2 91933156 91933780 -158754074 - MER67B LTR ERV1 0 661 2 368 286 82 34 chr2 91934655 91934802 -158753052 + MIR3 SINE MIR 5 158 -50 321 308 22 11 chr2 91934804 91934895 -158752959 + MER20 DNA MER1_type 1 92 -127 3770 136 83 100 chr2 91934906 91935839 -158752015 - Ricksha DNA DNA -13 3233 2350 272 103 0 0 chr2 91935862 91935901 -158751953 - Ricksha DNA DNA -1101 80 42 555 222 7 52 chr2 91935937 91936072 -158751782 + MER20 DNA MER1_type 91 219 0 1837 157 7 14 chr2 91936739 91937026 -158750828 + AluJo SINE Alu 11 295 -17 1991 150 13 7 chr2 91937305 91937612 -158750242 - AluSx SINE Alu -3 309 1 327 310 100 0 chr2 91937802 91937902 -158749952 - L2 LINE L2 -5 3267 3158 1625 158 4 15 chr2 91938275 91938548 -158749306 - AluJb SINE Alu -4 308 39 1135 233 63 67 chr2 91939182 91939574 -158748280 + L1M4 LINE L1 4064 4455 -1691 2105 106 20 3 chr2 91939574 91939866 -158747988 + AluSq SINE Alu 1 297 -16 1135 233 63 67 chr2 91939866 91939933 -158747921 + L1M4 LINE L1 4455 4521 -1625 2006 118 11 3 chr2 91940124 91940411 -158747443 + AluJb SINE Alu 1 289 -23 853 89 9 0 chr2 91940571 91940683 -158747171 + FLAM_C SINE Alu 1 113 -30 207 0 0 0 chr2 91940687 91940710 -158747144 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1652 185 0 10 chr2 91940979 91941271 -158746583 + AluJb SINE Alu 1 289 -23 708 242 84 5 chr2 91941532 91941722 -158746132 - MIR SINE MIR -12 250 46 2664 224 48 65 chr2 91941916 91941973 -158745881 - L1ME1 LINE L1 -5 6161 6105 2199 110 14 0 chr2 91941973 91942263 -158745591 + AluSx SINE Alu 1 294 -18 2664 224 48 65 chr2 91942263 91942797 -158745057 - L1ME1 LINE L1 -61 6105 5643 1607 165 38 24 chr2 91942797 91943088 -158744766 + AluJo SINE Alu 10 304 -8 2664 224 48 65 chr2 91943088 91943537 -158744317 - L1ME1 LINE L1 -523 5643 5188 787 194 0 8 chr2 91943538 91943672 -158744182 - FLAM_C SINE Alu 0 133 1 785 201 98 44 chr2 91943814 91943969 -158743885 + MIR SINE MIR 26 196 -66 2110 108 0 17 chr2 91943969 91944266 -158743588 + AluSp SINE Alu 1 292 -21 785 201 98 44 chr2 91944266 91944314 -158743540 + MIR SINE MIR 196 240 -22 219 294 129 24 chr2 91944392 91944477 -158743377 + L3 LINE CR1 327 420 -1157 295 326 72 33 chr2 91945008 91945189 -158742665 + L3 LINE CR1 543 730 -847 1436 167 12 16 chr2 91945232 91945489 -158742365 + AluJo SINE Alu 9 264 -48 2306 97 0 0 chr2 91945584 91945884 -158741970 + AluY SINE Alu 1 300 -11 240 360 124 13 chr2 91946619 91946844 -158741010 + L2 LINE L2 2383 2632 -682 782 167 0 8 chr2 91947935 91948055 -158739799 - FLAM_C SINE Alu -19 124 6 26 74 0 0 chr2 91948197 91948251 -158739603 + AT_rich Low_complexity Low_complexity 1 54 0 2035 129 7 3 chr2 91948251 91948538 -158739316 - AluSx SINE Alu -24 288 1 2319 134 32 24 chr2 91948999 91949371 -158738483 + THE1C LTR MaLR 1 375 0 1435 132 0 9 chr2 91950234 91950446 -158737408 + AluJb SINE Alu 1 210 -102 22 35 0 0 chr2 91950677 91950706 -158737148 + AT_rich Low_complexity Low_complexity 1 29 0 321 324 123 29 chr2 91951423 91951593 -158736261 - MIR3 SINE MIR -4 204 19 265 295 129 20 chr2 91951923 91952035 -158735819 + MIR SINE MIR 31 143 -65 1000 269 171 23 chr2 91952337 91952735 -158735119 - MLT1J LTR MaLR -54 457 1 2062 162 23 65 chr2 91953022 91953454 -158734400 + L1MA6 LINE L1 5887 6300 0 23 78 0 0 chr2 91953455 91953506 -158734348 + AT_rich Low_complexity Low_complexity 1 51 0 2213 171 79 14 chr2 91953850 91954295 -158733559 - L1MB7 LINE L1 -277 5907 5434 * 2743 91 33 42 chr2 91954289 91954407 -158733447 - L1ME1 LINE L1 -6 6160 6042 2424 65 0 7 chr2 91954407 91954701 -158733153 - AluSx SINE Alu -20 292 1 2743 91 33 42 chr2 91954701 91954994 -158732860 - L1ME1 LINE L1 -124 6042 5748 824 195 0 0 chr2 91954994 91955122 -158732732 - FLAM_C SINE Alu -3 130 3 2743 91 33 42 chr2 91955122 91955360 -158732494 - L1ME1 LINE L1 -418 5748 5509 6921 113 94 22 chr2 91955360 91955775 -158732079 - Tigger3b DNA MER2_type -1797 1231 847 216 0 0 0 chr2 91955775 91955799 -158732055 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 2085 113 3 0 chr2 91955799 91956082 -158731772 - AluSx SINE Alu -28 284 1 6921 113 94 22 chr2 91956082 91956291 -158731563 - Tigger3b DNA MER2_type -2181 847 655 2362 103 3 0 chr2 91956291 91956602 -158731252 - AluSx SINE Alu 0 312 1 6921 113 94 22 chr2 91956602 91957123 -158730731 - Tigger3b DNA MER2_type -2373 655 1 2743 91 33 42 chr2 91957123 91957365 -158730489 - L1ME1 LINE L1 -657 5509 5414 2266 101 0 0 chr2 91957472 91957760 -158730094 + AluSx SINE Alu 5 292 -20 45 0 0 0 chr2 91957760 91957805 -158730049 + AT_rich Low_complexity Low_complexity 1 45 0 2254 120 0 3 chr2 91958665 91958973 -158728881 + AluSx SINE Alu 1 307 -5 350 117 325 0 chr2 91960624 91960701 -158727153 - MER41A-int LTR ERV1 -5844 102 1 4012 96 47 4 chr2 91960701 91961232 -158726622 - MER41A LTR ERV1 0 554 1 346 280 14 43 chr2 91961387 91961502 -158726352 + MIR SINE MIR 17 141 -93 2343 171 33 37 chr2 91961855 91962311 -158725543 + MLT2B2 LTR ERVL 1 454 -61 2207 83 52 0 chr2 91962321 91962611 -158725243 + AluSq SINE Alu 1 305 -8 188 350 119 37 chr2 91962627 91962669 -158725185 + L3 LINE CR1 293 330 -1247 3889 109 91 8 chr2 91962669 91963264 -158724590 + LTR9B LTR ERV1 1 644 0 188 350 119 37 chr2 91963264 91963464 -158724390 + L3 LINE CR1 330 555 -1022 614 85 8 137 chr2 91963777 91963870 -158723984 + Tigger2a DNA MER2_type 3 78 -2640 2387 69 17 0 chr2 91963870 91964160 -158723694 + AluSp SINE Alu 1 295 -18 614 85 8 137 chr2 91964160 91964194 -158723660 + Tigger2a DNA MER2_type 78 115 -329 2084 148 120 3 chr2 91964398 91964755 -158723099 - MER57A LTR ERV1 0 403 5 1586 183 22 0 chr2 91964760 91965028 -158722826 + AluJo SINE Alu 22 295 -17 2370 97 7 0 chr2 91965182 91965492 -158722362 + AluSx SINE Alu 1 312 0 23 54 0 0 chr2 91965532 91965569 -158722285 + AT_rich Low_complexity Low_complexity 1 37 0 21 57 0 0 chr2 91965597 91965632 -158722222 + AT_rich Low_complexity Low_complexity 1 35 0 2133 242 125 3 chr2 91965900 91966475 -158721379 - L1MC4 LINE L1 -140 7902 7258 463 294 123 0 chr2 91967113 91967283 -158720571 + MIR SINE MIR 72 262 0 24 0 0 0 chr2 91967306 91967330 -158720524 + AT_rich Low_complexity Low_complexity 1 24 0 2740 210 120 81 chr2 91967361 91968358 -158719496 + LTR28 LTR ERV1 1 988 -32 369 165 117 39 chr2 91968360 91968463 -158719391 + LTR27 LTR ERV1 525 635 -1 4230 124 39 2 chr2 91968569 91969181 -158718673 + MER41B LTR ERV1 1 635 0 265 304 0 0 chr2 91969425 91969494 -158718360 - MIR SINE MIR -111 151 83 665 226 0 19 chr2 91970620 91970775 -158717079 + U2 snRNA snRNA 1 152 -36 456 226 88 10 chr2 91970920 91971022 -158716832 + AluJ SINE Alu 8 117 -195 621 152 76 199 chr2 91971027 91971303 -158716551 - AluJo SINE Alu -69 243 2 992 165 48 37 chr2 91971304 91971492 -158716362 + AluJ SINE Alu 114 303 -9 2103 104 56 0 chr2 91971495 91971782 -158716072 + AluSx SINE Alu 1 303 -9 1713 95 9 0 chr2 91971783 91972004 -158715850 + AluSg/x SINE Alu 82 304 -6 1893 119 3 72 chr2 91972004 91972339 -158715515 + AluSx SINE Alu 1 312 0 452 206 10 0 chr2 91972431 91972528 -158715326 - U2 snRNA snRNA -77 111 14 1978 152 0 10 chr2 91972842 91973152 -158714702 + AluJb SINE Alu 1 307 -5 2402 106 0 0 chr2 91973529 91973841 -158714013 + AluSx SINE Alu 1 312 0 365 284 93 43 chr2 91973983 91974173 -158713681 + MIR SINE MIR 3 199 -63 2276 81 10 52 chr2 91975085 91975393 -158712461 + AluSq SINE Alu 1 295 -18 225 252 252 35 chr2 91975406 91975549 -158712305 - MIR3 SINE MIR -19 189 16 1892 144 7 3 chr2 91976034 91976318 -158711536 - AluJb SINE Alu -25 287 3 416 220 87 20 chr2 91976327 91976477 -158711377 + Charlie8 DNA MER1_type 77 236 -2181 678 111 0 19 chr2 91977131 91977239 -158710615 + L1MB3 LINE L1 6039 6144 -39 1287 191 78 0 chr2 91977262 91977555 -158710299 + L1MD2 LINE L1 6044 6359 0 1612 17 0 0 chr2 91978104 91978285 -158709569 - L1PA2 LINE L1 0 6155 5975 21 0 0 0 chr2 91978309 91978330 -158709524 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr2 91978350 91978373 -158709481 + (A)n Simple_repeat Simple_repeat 1 23 0 378 287 29 44 chr2 91978399 91978535 -158709319 - MIR SINE MIR -59 203 70 1056 290 97 15 chr2 91978623 91979095 -158708759 + L2 LINE L2 2800 3313 0 1797 167 31 17 chr2 91980307 91980667 -158707187 - MLT2D LTR ERVL -49 365 1 406 327 56 12 chr2 91980667 91980829 -158707025 - MIR SINE MIR -54 208 40 1984 153 19 19 chr2 91980857 91981164 -158706690 - AluJb SINE Alu -5 307 1 530 324 7 0 chr2 91981266 91981402 -158706452 - MIR3 SINE MIR -3 205 69 1275 228 52 98 chr2 91982721 91982845 -158705009 - LTR33 LTR ERVL -4 517 389 1621 157 45 18 chr2 91982845 91982955 -158704899 + AluJo SINE Alu 11 116 -196 197 33 33 0 chr2 91982955 91982985 -158704869 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 1621 157 45 18 chr2 91982985 91983138 -158704716 + AluJo SINE Alu 116 285 -27 219 36 0 0 chr2 91983138 91983166 -158704688 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 1621 157 45 18 chr2 91983166 91983187 -158704667 + AluJo SINE Alu 285 304 -8 1275 228 52 98 chr2 91983187 91983602 -158704252 - LTR33 LTR ERVL -132 389 3 351 250 158 8 chr2 91984508 91984628 -158703226 - MIR SINE MIR -124 138 1 22 0 0 0 chr2 91985254 91985276 -158702578 + AT_rich Low_complexity Low_complexity 1 22 0 258 299 62 10 chr2 91985510 91985607 -158702247 + MIR3 SINE MIR 86 187 -21 273 281 52 21 chr2 91985718 91985814 -158702040 - MIR SINE MIR -78 130 32 221 221 208 0 chr2 91986345 91986422 -158701432 + MIR SINE MIR 53 145 -63 419 279 158 46 chr2 91988187 91988402 -158699452 + MIR SINE MIR 20 256 -6 995 205 35 13 chr2 91988633 91988862 -158698992 - MER76 LTR ERV -1 687 454 1110 119 11 23 chr2 91988873 91989049 -158698805 - MLT1C LTR MaLR -293 174 1 201 74 0 0 chr2 91989082 91989109 -158698745 + (CA)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr2 91989483 91989505 -158698349 + AT_rich Low_complexity Low_complexity 1 22 0 560 243 69 12 chr2 91989913 91990086 -158697768 + MIR3 SINE MIR 16 198 -10 2013 147 3 13 chr2 91990349 91990662 -158697192 - AluJb SINE Alu 0 312 3 205 205 0 0 chr2 91990850 91990889 -158696965 + A-rich Low_complexity Low_complexity 1 39 0 371 261 17 53 chr2 91990930 91991201 -158696653 + CT-rich Low_complexity Low_complexity 1 261 0 252 268 173 0 chr2 91992421 91992600 -158695254 + L1ME4a LINE L1 5724 5933 -188 248 28 56 0 chr2 91992707 91992743 -158695111 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2032 143 0 0 chr2 91992745 91993031 -158694823 - AluSx SINE Alu -26 286 1 333 304 148 7 chr2 91993118 91993253 -158694601 + HAL1b LINE L1 1189 1342 -6 1049 333 128 27 chr2 91993470 91994101 -158693753 + L3 LINE CR1 353 1047 -530 717 229 72 0 chr2 91994702 91994868 -158692986 + MER5B DNA MER1_type 1 178 0 231 298 21 92 chr2 91994894 91995035 -158692819 + MER5B DNA MER1_type 25 155 -23 2516 90 0 0 chr2 91995081 91995392 -158692462 - AluY SINE Alu 0 311 1 467 325 31 6 chr2 91996272 91996435 -158691419 - MER5B DNA MER1_type -9 169 3 589 272 12 17 chr2 91996451 91996624 -158691230 + MIR SINE MIR 33 204 -58 189 0 0 0 chr2 91996643 91996664 -158691190 + (CA)n Simple_repeat Simple_repeat 2 22 0 1025 211 86 61 chr2 91996666 91996918 -158690936 + MER2 DNA MER2_type 11 274 -71 1971 138 0 10 chr2 91996918 91997207 -158690647 + AluSx SINE Alu 1 286 -26 1025 211 86 61 chr2 91997207 91997281 -158690573 + MER2 DNA MER2_type 274 345 0 189 74 0 0 chr2 91997289 91997316 -158690538 + (TG)n Simple_repeat Simple_repeat 2 28 0 631 273 145 0 chr2 91997805 91997977 -158689877 - MER117 DNA MER1_type 0 197 1 207 0 0 0 chr2 91998118 91998141 -158689713 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2394 65 7 3 chr2 91998185 91998477 -158689377 + AluY SINE Alu 1 293 -18 3866 100 0 0 chr2 91998808 91999350 -158688504 - L1P LINE L1 -5596 550 9 216 307 26 26 chr2 91999405 91999498 -158688356 + MIR SINE MIR 38 131 -77 1813 169 40 6 chr2 91999956 92000306 -158687548 - MSTB LTR MaLR 0 426 65 426 89 0 0 chr2 92000406 92000462 -158687392 - MSTB LTR MaLR -370 56 1 485 297 0 9 chr2 92000462 92000573 -158687281 - MIR SINE MIR -62 146 37 216 97 0 0 chr2 92000614 92000645 -158687209 + (TG)n Simple_repeat Simple_repeat 1 31 0 548 238 133 33 chr2 92000679 92000889 -158686965 + MIR SINE MIR 4 234 -28 269 324 93 39 chr2 92000952 92001134 -158686720 + MIR SINE MIR 1 192 -70 317 238 179 0 chr2 92001185 92001269 -158686585 + L2 LINE L2 3210 3308 -5 299 281 22 11 chr2 92001347 92001436 -158686418 - MIR SINE MIR -126 136 47 306 0 0 0 chr2 92001571 92001605 -158686249 + (TG)n Simple_repeat Simple_repeat 2 35 0 206 241 0 19 chr2 92002041 92002095 -158685759 + (CAACT)n Simple_repeat Simple_repeat 4 56 0 574 324 162 24 chr2 92003785 92004463 -158683391 + L2 LINE L2 1554 2388 -926 548 248 8 0 chr2 92004502 92004619 -158683235 + L2 LINE L2 3142 3259 -13 270 81 0 0 chr2 92004619 92004656 -158683198 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1001 173 55 25 chr2 92004793 92004995 -158682859 + MER3 DNA MER1_type 1 208 -1 381 274 177 42 chr2 92005024 92005239 -158682615 + MIR SINE MIR 19 262 0 658 246 0 0 chr2 92005320 92005454 -158682400 - MER63A DNA MER1_type 0 210 77 218 280 263 8 chr2 92005542 92005660 -158682194 - L3 LINE CR1 -186 1391 1244 1847 172 7 3 chr2 92005806 92006108 -158681746 - AluJb SINE Alu -9 303 1 2376 158 96 19 chr2 92006458 92006927 -158680927 - MLT1D LTR MaLR 0 505 1 433 200 105 0 chr2 92007466 92007571 -158680283 + MER63 DNA MER1_type 1 742 -320 534 250 82 11 chr2 92008117 92008301 -158679553 + LTR33 LTR ERVL 261 457 -64 * 3944 136 66 6 chr2 92008297 92008968 -158678886 - MER50 LTR ERV1 -23 711 1 456 371 96 25 chr2 92009026 92009379 -158678475 + L2 LINE L2 2474 2851 -463 183 176 59 0 chr2 92009565 92009599 -158678255 + L2 LINE L2 3196 3231 -41 274 310 35 35 chr2 92010462 92010575 -158677279 - MIR SINE MIR -52 210 98 305 348 138 21 chr2 92010865 92011201 -158676653 - L1MC4a LINE L1 -1894 5914 5619 207 0 0 0 chr2 92011201 92011224 -158676630 + (TA)n Simple_repeat Simple_repeat 2 24 0 2131 120 0 52 chr2 92011224 92011549 -158676305 - AluSx SINE Alu -4 308 1 305 348 138 21 chr2 92011549 92011792 -158676062 - L1MC4a LINE L1 -2188 5620 5266 2357 112 0 3 chr2 92012004 92012317 -158675537 - AluSx SINE Alu 0 312 1 1381 226 69 3 chr2 92012762 92013081 -158674773 + MER58B DNA MER1_type 2 341 0 1802 193 158 7 chr2 92013399 92013803 -158674051 - MLT1C LTR MaLR -2 465 1 232 286 26 39 chr2 92014788 92014865 -158672989 - L2 LINE L2 -15 3298 3223 232 253 133 0 chr2 92015076 92015151 -158672703 + MIR SINE MIR 49 133 -129 904 134 8 22 chr2 92016348 92016482 -158671372 - FLAM_C SINE Alu -1 132 1 180 176 29 0 chr2 92016996 92017030 -158670824 - MIR SINE MIR -63 145 111 401 270 9 0 chr2 92018083 92018194 -158669660 + MER94 DNA DNA 4 115 -19 754 250 43 17 chr2 92018658 92018890 -158668964 + MIR SINE MIR 9 246 -16 224 281 0 101 chr2 92018960 92019049 -158668805 + L2 LINE L2 3193 3272 0 302 280 43 43 chr2 92019702 92019795 -158668059 + L1MC4 LINE L1 6617 6709 -1333 255 310 30 10 chr2 92019802 92019902 -158667952 + (TATG)n Simple_repeat Simple_repeat 2 103 0 188 169 31 77 chr2 92020168 92020233 -158667621 + L3b LINE CR1 1277 1338 -245 214 348 105 6 chr2 92020461 92020642 -158667212 + L2 LINE L2 2599 2797 -517 244 250 40 26 chr2 92020917 92020993 -158666861 - L3 LINE CR1 -27 1550 1474 342 0 0 0 chr2 92021494 92021532 -158666322 + (TG)n Simple_repeat Simple_repeat 2 39 0 4989 113 10 1 chr2 92023548 92024277 -158663577 + L1PA15 LINE L1 5422 6156 -9 22 0 0 0 chr2 92024306 92024328 -158663526 + AT_rich Low_complexity Low_complexity 1 22 0 460 240 78 68 chr2 92024538 92024730 -158663124 - L1MEd LINE L1 -5816 303 110 267 214 36 36 chr2 92076199 92076283 -158611571 + LTR33A LTR ERVL 440 523 0 21 57 0 0 chr2 92076329 92076364 -158611490 + AT_rich Low_complexity Low_complexity 1 35 0 253 232 0 36 chr2 92077204 92077260 -158610594 - MIR SINE MIR -89 173 120 252 157 60 0 chr2 92078520 92078577 -158609277 + MIR SINE MIR 115 175 -87 210 188 0 42 chr2 92079908 92079956 -158607898 + C-rich Low_complexity Low_complexity 1 46 0 2097 123 0 3 chr2 92080996 92081297 -158606557 - AluSc SINE Alu -9 300 1 294 75 25 0 chr2 92081373 92081413 -158606441 + MER53 DNA DNA 1 41 -148 744 238 98 10 chr2 92081433 92081626 -158606228 + MIR SINE MIR 45 254 -8 357 317 21 42 chr2 92082796 92082938 -158604916 - MIR SINE MIR -118 144 6 2173 104 0 9 chr2 92083180 92083496 -158604358 + AluSq SINE Alu 1 313 0 2604 209 48 17 chr2 92083663 92084265 -158603589 - L1MD2 LINE L1 -21 6338 5713 296 307 247 16 chr2 92084280 92084531 -158603323 - L2 LINE L2 0 3313 3005 240 35 0 0 chr2 92084629 92084649 -158603205 + (CA)n Simple_repeat Simple_repeat 1 49 0 240 35 0 0 chr2 92084649 92084678 -158603176 + (CA)n Simple_repeat Simple_repeat 2 30 0 731 136 0 0 chr2 92084694 92084804 -158603050 - FLAM_A SINE Alu -13 129 20 475 261 151 33 chr2 92084819 92085091 -158602763 - L2 LINE L2 -339 2975 2672 186 250 0 0 chr2 92085273 92085329 -158602525 + C-rich Low_complexity Low_complexity 2 57 0 830 119 11 38 chr2 92085329 92085514 -158602340 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 399 302 0 9 chr2 92085677 92085793 -158602061 - MIR SINE MIR -134 128 14 369 271 173 0 chr2 92086216 92086349 -158601505 + MIR SINE MIR 81 236 -26 1839 163 70 61 chr2 92086381 92086840 -158601014 + MLT1C LTR MaLR 2 464 -3 195 304 0 0 chr2 92086888 92086934 -158600920 + MIR SINE MIR 57 102 -160 * 219 216 307 23 chr2 92086929 92087017 -158600837 - MIR3 SINE MIR -1 207 95 190 213 19 0 chr2 92087013 92087073 -158600781 + MIR SINE MIR 101 140 -68 * 382 333 0 8 chr2 92087373 92087493 -158600361 + MIR3 SINE MIR 37 155 -53 217 294 29 15 chr2 92087480 92087548 -158600306 - MIR SINE MIR -192 70 2 * 22 70 0 0 chr2 92087784 92087827 -158600027 + AT_rich Low_complexity Low_complexity 1 43 0 381 295 6 6 chr2 92088122 92088288 -158599566 + (CAT)n Simple_repeat Simple_repeat 3 168 0 1257 116 5 74 chr2 92088318 92088533 -158599321 - MLT2A1 LTR ERVL 0 444 245 698 249 19 94 chr2 92088666 92088975 -158598879 + L2 LINE L2 3028 3313 0 1498 219 77 14 chr2 92089243 92089682 -158598172 - MLT1C LTR MaLR 0 467 1 201 241 19 111 chr2 92089734 92089842 -158598012 - L2 LINE L2 -667 2647 2550 * 278 260 67 10 chr2 92089834 92089938 -158597916 - MIR SINE MIR -96 166 57 216 297 17 59 chr2 92089965 92090083 -158597771 - MIR SINE MIR -140 122 10 284 306 62 35 chr2 92090496 92090640 -158597214 + MIR SINE MIR 107 254 -8 301 287 56 37 chr2 92090690 92090798 -158597056 + MIR3 SINE MIR 45 154 -54 1093 257 16 16 chr2 92090803 92091052 -158596802 + MIR SINE MIR 14 262 0 230 226 65 65 chr2 92091055 92091148 -158596706 + MIR SINE MIR 134 226 -36 688 213 201 0 chr2 92091804 92091968 -158595886 + MER3 DNA MER1_type 13 209 0 426 325 0 8 chr2 92091969 92092086 -158595768 - MIR SINE MIR -73 135 20 1016 220 15 58 chr2 92092527 92092786 -158595068 + MIR SINE MIR 15 262 0 211 298 36 36 chr2 92092851 92092935 -158594919 + MIR SINE MIR 86 169 -93 647 138 0 57 chr2 92093002 92093125 -158594729 - AluSg/x SINE Alu -3 309 194 1461 87 41 18 chr2 92093157 92093375 -158594479 + AluY SINE Alu 74 296 -15 853 191 123 72 chr2 92093506 92093783 -158594071 + MER102b DNA MER1_type 19 309 -32 865 142 154 0 chr2 92093881 92094043 -158593811 - MER5A DNA MER1_type -2 187 1 2147 103 7 0 chr2 92094059 92094361 -158593493 - AluSq SINE Alu -9 304 1 4596 201 61 22 chr2 92094814 92095677 -158592177 + L1MDa LINE L1 1504 2449 -4091 680 108 0 0 chr2 92095677 92095770 -158592084 + HY4 scRNA scRNA 1 93 0 4596 201 61 22 chr2 92095770 92096406 -158591448 + L1MDa LINE L1 2449 3059 -3481 183 200 0 0 chr2 92096601 92096631 -158591223 + L2 LINE L2 3248 3277 -36 * 207 140 140 20 chr2 92096605 92096655 -158591199 + MIR SINE MIR 207 262 0 185 234 13 91 chr2 92096652 92096729 -158591125 - MIR SINE MIR -73 189 119 * 707 72 78 0 chr2 92097462 92097629 -158590225 + CT-rich Low_complexity Low_complexity 1 180 0 306 73 0 0 chr2 92097646 92097687 -158590167 + (TC)n Simple_repeat Simple_repeat 1 41 0 3399 132 30 12 chr2 92099194 92099754 -158588100 - L1MB3 LINE L1 -2 6181 5612 289 359 35 5 chr2 92099801 92099999 -158587855 + L2 LINE L2 2764 2967 -347 1866 177 105 21 chr2 92100061 92100490 -158587364 - MLT1C LTR MaLR -2 465 1 228 316 51 8 chr2 92100649 92100766 -158587088 - MIR SINE MIR -67 141 20 310 344 45 0 chr2 92100809 92100963 -158586891 - LTR16A LTR ERVL -34 416 256 488 274 24 24 chr2 92100994 92101158 -158586696 - LTR16A1 LTR ERVL -293 164 1 230 273 15 0 chr2 92101292 92101358 -158586496 + MIR SINE MIR 70 136 -72 1994 144 7 102 chr2 92101510 92101941 -158585913 - MLT1B LTR MaLR 0 390 1 624 205 0 0 chr2 92102087 92102253 -158585601 + (TG)n Simple_repeat Simple_repeat 1 166 0 278 154 0 15 chr2 92102275 92102340 -158585514 + (TG)n Simple_repeat Simple_repeat 1 64 0 1984 159 0 18 chr2 92102949 92103283 -158584571 + L1MA7 LINE L1 5605 5932 -359 2269 127 8 42 chr2 92103284 92103661 -158584193 + THE1B LTR MaLR 1 364 0 432 61 0 0 chr2 92103667 92103733 -158584121 + L1MA7 LINE L1 6226 6291 0 2859 73 22 68 chr2 92103981 92104167 -158583687 - L1PB1 LINE L1 0 6151 5958 2020 141 6 6 chr2 92104167 92104479 -158583375 - AluSq SINE Alu -1 312 1 2859 73 22 68 chr2 92104479 92104746 -158583108 - L1PB1 LINE L1 -193 5958 5719 2095 330 35 47 chr2 92104930 92105984 -158581870 + ERVL LTR ERVL 2763 3804 -1960 4078 157 107 46 chr2 92105989 92106792 -158581062 + MER21B LTR ERV1 1 852 -11 1086 274 28 52 chr2 92106806 92107000 -158580854 + ERVL LTR ERVL 3778 3975 -1679 2037 121 10 0 chr2 92107000 92107298 -158580556 - AluSx SINE Alu -11 301 1 1086 274 28 52 chr2 92107298 92107526 -158580328 + ERVL LTR ERVL 3975 4190 -1464 1564 228 26 48 chr2 92107555 92108098 -158579756 + L1MC5 LINE L1 7312 7842 -119 1039 107 13 0 chr2 92108198 92108348 -158579506 - MSTA LTR MaLR -276 152 1 244 263 143 85 chr2 92109076 92109369 -158578485 - L3 LINE CR1 -73 1504 1195 470 206 73 115 chr2 92109888 92110106 -158577748 - LTR67 LTR ERVL -348 209 1 2066 217 21 5 chr2 92110537 92110956 -158576898 + MER57B LTR ERV1 9 434 0 333 333 45 39 chr2 92110960 92111028 -158576826 - L2 LINE L2 -14 3258 3192 1652 176 0 34 chr2 92111028 92111351 -158576503 + AluJo SINE Alu 1 312 0 333 333 45 39 chr2 92111351 92111438 -158576416 - L2 LINE L2 -80 3192 3102 280 91 0 0 chr2 92112578 92112622 -158575232 + Alu SINE Alu 265 308 0 216 241 190 9 chr2 92112777 92112893 -158574961 + MIR3 SINE MIR 1 137 -71 2127 110 0 0 chr2 92112961 92113252 -158574602 + AluSx SINE Alu 1 291 -21 1439 183 63 42 chr2 92113494 92113828 -158574026 + MER58B DNA MER1_type 1 341 0 1358 239 108 14 chr2 92113832 92114192 -158573662 + MLT1E LTR MaLR 8 401 -192 301 283 66 81 chr2 92114249 92114447 -158573407 - L1MC/D LINE L1 -1983 5825 5631 640 265 39 34 chr2 92114489 92114693 -158573161 + MIR SINE MIR 12 216 -46 1918 131 7 0 chr2 92114806 92115096 -158572758 - AluSx SINE Alu -20 292 1 490 287 112 24 chr2 92115200 92115451 -158572403 + L3 LINE CR1 1229 1501 -76 264 269 26 0 chr2 92115802 92115896 -158571958 - MIR SINE MIR -92 116 16 187 397 0 0 chr2 92115982 92116055 -158571799 + MIR SINE MIR 20 92 -170 183 266 64 53 chr2 92116626 92116720 -158571134 - MIR3 SINE MIR -54 154 60 510 279 34 11 chr2 92116933 92117112 -158570742 - MIR SINE MIR -32 230 48 711 188 221 0 chr2 92117355 92117509 -158570345 - MER5A DNA MER1_type 0 189 2 264 258 227 15 chr2 92117661 92117793 -158570061 + MIR SINE MIR 98 257 -5 1846 248 141 2 chr2 92118544 92118737 -158569117 - MLT2F LTR ERVL -56 607 442 2030 175 42 11 chr2 92118737 92119115 -158568739 - MLT1B LTR MaLR 0 390 1 1846 248 141 2 chr2 92119115 92119454 -158568400 - MLT2F LTR ERVL -221 442 1 959 212 95 82 chr2 92119457 92119858 -158567996 - ERVL-F LTR ERVL -11 5753 5348 192 163 0 0 chr2 92120071 92120114 -158567740 + CT-rich Low_complexity Low_complexity 2 44 0 216 156 0 44 chr2 92120258 92120303 -158567551 + T-rich Low_complexity Low_complexity 3 45 0 183 354 174 7 chr2 92120620 92120764 -158567090 + MIR SINE MIR 20 187 -75 1674 266 77 17 chr2 92121208 92122083 -158565771 - L1MDa LINE L1 -5195 1345 18 553 162 77 111 chr2 92122085 92122319 -158565535 + L1MC5 LINE L1 7631 7856 -105 1200 145 149 4 chr2 92122357 92122633 -158565221 - MER33 DNA MER1_type -8 316 1 21 36 0 0 chr2 92122667 92122695 -158565159 + AT_rich Low_complexity Low_complexity 1 28 0 254 306 0 47 chr2 92122921 92123006 -158564848 + L2 LINE L2 3233 3313 0 210 340 153 7 chr2 92123081 92123225 -158564629 - MIR SINE MIR -49 213 49 862 171 104 76 chr2 92123368 92123619 -158564235 + MLT1E2 LTR MaLR 1 258 -368 1661 185 31 34 chr2 92123722 92124073 -158563781 + MLT1A1 LTR MaLR 10 359 -6 390 289 23 39 chr2 92124079 92124207 -158563647 - MIR SINE MIR -65 143 18 225 315 141 0 chr2 92124261 92124353 -158563501 + L2 LINE L2 3209 3313 0 1663 176 42 0 chr2 92125202 92125491 -158562363 + AluJo SINE Alu 2 302 -10 894 225 21 5 chr2 92125540 92125731 -158562123 - MIR SINE MIR -17 245 52 2321 180 135 29 chr2 92127094 92127621 -158560233 - MER119 DNA MER1_type 0 583 1 282 303 161 43 chr2 92127901 92128063 -158559791 + L2 LINE L2 3076 3256 -16 402 237 15 44 chr2 92129592 92129727 -158558127 + L2 LINE L2 3182 3312 -1 1168 211 143 48 chr2 92129950 92130371 -158557483 - MLT1C LTR MaLR 0 467 7 260 292 189 13 chr2 92130392 92130617 -158557237 - L3 LINE CR1 -503 1074 781 1623 173 19 38 chr2 92130617 92130935 -158556919 - AluJo SINE Alu 0 312 1 260 292 189 13 chr2 92130935 92131010 -158556844 - L3 LINE CR1 -796 781 721 281 357 81 27 chr2 92131262 92131447 -158556407 - L3 LINE CR1 -1079 498 304 2197 94 7 3 chr2 92131542 92131829 -158556025 + AluSc SINE Alu 1 288 -21 288 0 0 0 chr2 92131941 92131973 -158555881 + (TG)n Simple_repeat Simple_repeat 2 33 0 398 209 0 35 chr2 92131986 92132072 -158555782 - MIR SINE MIR -71 191 109 1813 122 4 0 chr2 92132554 92132799 -158555055 + AluSx SINE Alu 1 246 -66 369 0 0 0 chr2 92132986 92133027 -158554827 + (CA)n Simple_repeat Simple_repeat 2 42 0 25 0 0 0 chr2 92133663 92133688 -158554166 + AT_rich Low_complexity Low_complexity 1 25 0 216 296 82 10 chr2 92133990 92134088 -158553766 + MIR3 SINE MIR 83 187 -21 1439 168 46 39 chr2 92134867 92134931 -158552923 + AluJo SINE Alu 1 63 -271 2359 117 38 6 chr2 92134931 92135274 -158552580 + THE1A LTR MaLR 1 354 -1 12527 93 10 1 chr2 92135275 92136840 -158551014 + THE1A-int LTR MaLR 1 1580 0 2070 145 75 6 chr2 92136840 92137172 -158550682 + THE1A LTR MaLR 1 355 0 1439 168 46 39 chr2 92137172 92137436 -158550418 + AluJo SINE Alu 62 334 0 2167 116 0 3 chr2 92137824 92138116 -158549738 + AluSx SINE Alu 1 291 -21 1687 202 48 18 chr2 92138497 92138755 -158549099 + MER58B DNA MER1_type 1 273 -2147 2503 136 103 5 chr2 92138755 92139145 -158548709 + MSTA LTR MaLR 1 428 0 1687 202 48 18 chr2 92139145 92139217 -158548637 + MER58B DNA MER1_type 273 341 0 185 309 27 73 chr2 92140311 92140382 -158547472 - L2 LINE L2 0 3272 3206 2872 121 32 69 chr2 92140382 92140887 -158546967 - MER66B LTR ERV1 0 486 1 185 309 27 73 chr2 92140887 92140925 -158546929 - L2 LINE L2 -66 3206 3168 468 242 16 16 chr2 92141144 92141272 -158546582 - MLT1L LTR MaLR -2 613 486 1628 222 52 89 chr2 92141284 92141871 -158545983 - MLT1F1 LTR MaLR -2 565 1 375 269 204 23 chr2 92141893 92142202 -158545652 - MLT1L LTR MaLR -164 451 87 786 278 102 75 chr2 92142279 92142836 -158545018 + MLT1L LTR MaLR 42 613 -2 422 249 36 42 chr2 92142938 92143103 -158544751 - L2 LINE L2 -597 2717 2554 392 227 100 9 chr2 92143553 92143663 -158544191 - MIR SINE MIR -115 147 28 416 316 38 0 chr2 92144219 92144352 -158543502 - MIR3 SINE MIR -23 185 48 2413 130 26 50 chr2 92144843 92145214 -158542640 - L1MA5 LINE L1 0 6300 5939 2293 96 0 0 chr2 92145214 92145506 -158542348 + AluSg SINE Alu 1 292 -18 2413 130 26 50 chr2 92145506 92145557 -158542297 - L1MA5 LINE L1 -361 5939 5888 621 143 0 0 chr2 92145573 92145664 -158542190 - L1PA15 LINE L1 -6 6159 6069 889 127 0 0 chr2 92146173 92146307 -158541547 + L1MA5A LINE L1 6164 6297 0 289 159 55 0 chr2 92146406 92146495 -158541359 - MER58 DNA MER1_type -16 2404 103 292 206 11 11 chr2 92146495 92146587 -158541267 + CT-rich Low_complexity Low_complexity 2 93 0 1380 174 42 0 chr2 92146596 92146837 -158541017 - AluJb SINE Alu -61 251 1 619 215 146 0 chr2 92146839 92146983 -158540871 - MER58A DNA MER1_type 0 165 1 * 1061 255 58 41 chr2 92146983 92147326 -158540528 - MLT1I LTR MaLR -60 349 1 192 289 0 0 chr2 92147373 92147425 -158540429 - L2 LINE L2 0 3313 3262 351 298 38 25 chr2 92147599 92147757 -158540097 + L1ME4a LINE L1 5955 6114 -7 1032 277 46 69 chr2 92147799 92148323 -158539531 + L1ME LINE L1 155 666 -5539 1286 244 23 80 chr2 92148370 92149095 -158538759 + L1ME LINE L1 661 1223 -4982 1553 146 8 0 chr2 92149117 92149356 -158538498 + AluSq SINE Alu 1 241 -72 2267 131 32 133 chr2 92149356 92149890 -158537964 + LTR12 LTR ERV1 1 480 -234 350 97 48 0 chr2 92149891 92149953 -158537901 + AluSq SINE Alu 236 300 0 2315 251 54 36 chr2 92150145 92150789 -158537065 + L1ME LINE L1 1601 2232 -3983 2175 97 0 13 chr2 92150789 92151114 -158536740 + AluSq SINE Alu 1 313 0 2315 251 54 36 chr2 92151114 92151816 -158536038 + L1ME LINE L1 2232 2946 -3269 957 192 9 55 chr2 92151840 92151969 -158535885 - L1PA16 LINE L1 -7 6159 6043 2563 60 0 0 chr2 92151969 92152269 -158535585 - AluY SINE Alu -11 300 1 957 192 9 55 chr2 92152269 92152358 -158535496 - L1PA16 LINE L1 -123 6043 5951 469 209 16 16 chr2 92152357 92152486 -158535368 + L1ME LINE L1 2933 3061 -3154 * 727 197 57 0 chr2 92152487 92152680 -158535174 + L1ME LINE L1 3111 3314 -2901 1397 142 5 14 chr2 92152718 92152930 -158534924 + AluSg/x SINE Alu 82 291 -19 189 0 0 0 chr2 92152934 92152955 -158534899 + (TG)n Simple_repeat Simple_repeat 2 22 0 259 130 0 0 chr2 92152955 92153001 -158534853 + LTR66 LTR ERVL 394 439 -171 195 129 0 0 chr2 92153005 92153036 -158534818 + (TA)n Simple_repeat Simple_repeat 2 32 0 255 293 144 39 chr2 92153056 92153390 -158534464 + L1ME4a LINE L1 5753 6121 0 324 144 10 96 chr2 92153898 92154002 -158533852 + MER106B DNA MER1_type 965 1059 0 431 294 214 8 chr2 92155067 92155319 -158532535 + L2 LINE L2 1240 1543 -1771 601 153 0 0 chr2 92155338 92155423 -158532431 + FRAM SINE Alu 10 94 -82 386 232 123 0 chr2 92155484 92155622 -158532232 + L2 LINE L2 1548 1702 -1612 212 273 174 0 chr2 92155756 92155877 -158531977 + L2 LINE L2 1915 2056 -1258 710 215 14 35 chr2 92155912 92156056 -158531798 - FRAM SINE Alu -30 146 6 1246 247 112 15 chr2 92156065 92156142 -158531712 + L2 LINE L2 2043 2111 -1203 2580 159 51 26 chr2 92156142 92156633 -158531221 - MLT1D LTR MaLR -2 503 1 1246 247 112 15 chr2 92156633 92157012 -158530842 + L2 LINE L2 2111 2543 -771 474 186 0 136 chr2 92157012 92157189 -158530665 + L1MC5 LINE L1 7765 7917 -44 2132 109 7 23 chr2 92157257 92157560 -158530294 + AluSg SINE Alu 1 298 -12 865 182 0 0 chr2 92157608 92157740 -158530114 + FLAM_C SINE Alu 1 132 -1 14532 114 32 75 chr2 92157841 92159645 -158528209 + Tigger1 DNA MER2_type 2 1881 -537 2910 0 0 3 chr2 92159645 92159957 -158527897 - AluYa5 SINE Alu 0 311 1 14532 114 32 75 chr2 92159957 92160218 -158527636 + Tigger1 DNA MER2_type 1881 2152 -266 1779 167 0 27 chr2 92160218 92160518 -158527336 + AluJb SINE Alu 13 304 -8 14532 114 32 75 chr2 92160518 92160781 -158527073 + Tigger1 DNA MER2_type 2152 2218 -200 2316 88 0 0 chr2 92160781 92161075 -158526779 - AluSg SINE Alu -16 294 1 14532 114 32 75 chr2 92161075 92161268 -158526586 + Tigger1 DNA MER2_type 2218 2418 0 1017 257 132 45 chr2 92161488 92162194 -158525660 + L2 LINE L2 2536 3298 -15 498 114 0 0 chr2 92162474 92162562 -158525292 + (TCCA)n Simple_repeat Simple_repeat 2 89 0 265 322 52 43 chr2 92162939 92163150 -158524704 - L1ME LINE L1 -595 5571 5359 1022 166 0 0 chr2 92163245 92163396 -158524458 + FRAM SINE Alu 11 161 -15 234 0 0 0 chr2 92163428 92163454 -158524400 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 783 152 98 6 chr2 92163454 92163618 -158524236 - L1M4 LINE L1 -704 5474 5296 21 0 0 0 chr2 92164086 92164107 -158523747 + AT_rich Low_complexity Low_complexity 1 21 0 297 308 125 29 chr2 92164216 92164456 -158523398 + L2 LINE L2 2391 2653 -661 286 326 43 0 chr2 92164522 92164614 -158523240 + L2 LINE L2 3137 3232 -40 188 111 28 0 chr2 92164637 92164673 -158523181 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 213 254 39 100 chr2 92164703 92164833 -158523021 + L2 LINE L2 2742 2863 -451 2684 3 0 10 chr2 92164898 92165190 -158522664 - AluYa5 SINE Alu -11 300 12 331 296 35 26 chr2 92165541 92165656 -158522198 - MIR SINE MIR -73 135 20 603 202 0 0 chr2 92165693 92165797 -158522057 + U13 snRNA snRNA 1 104 0 2237 118 0 0 chr2 92165823 92166120 -158521734 + AluSx SINE Alu 1 297 -15 261 0 0 0 chr2 92166189 92166218 -158521636 + (TG)n Simple_repeat Simple_repeat 2 30 0 423 238 14 56 chr2 92166220 92166363 -158521491 - MIR3 SINE MIR -51 157 21 378 269 197 21 chr2 92166479 92166672 -158521182 - MIR SINE MIR -12 250 24 4352 181 28 34 chr2 92166757 92167229 -158520625 + L1MB7 LINE L1 5227 5701 -483 879 226 12 0 chr2 92167229 92167397 -158520457 + FAM SINE Alu 4 173 -2 4352 181 28 34 chr2 92167397 92167889 -158519965 + L1MB7 LINE L1 5701 6184 0 312 280 0 67 chr2 92168215 92168365 -158519489 + HAL1 LINE L1 1425 1564 -943 * 3118 172 32 32 chr2 92168351 92168526 -158519328 + L1MB1 LINE L1 5000 5174 -994 1947 126 10 29 chr2 92168526 92168835 -158519019 + AluJb SINE Alu 6 308 -4 3118 172 32 32 chr2 92168835 92169414 -158518440 + L1MB1 LINE L1 5174 5933 -235 825 150 24 0 chr2 92169527 92169654 -158518200 - FLAM_C SINE Alu 0 133 4 6547 193 51 25 chr2 92170026 92171485 -158516369 + L1MC3 LINE L1 5620 7116 -669 1400 120 0 5 chr2 92171489 92171681 -158516173 - AluSg SINE Alu -58 252 62 3594 176 21 5 chr2 92171681 92172335 -158515519 + L1MC3 LINE L1 7121 7785 0 27 0 0 0 chr2 92172335 92172362 -158515492 + AT_rich Low_complexity Low_complexity 1 27 0 2650 205 41 77 chr2 92172362 92173068 -158514786 - L1ME1 LINE L1 -32 6134 5454 338 300 38 88 chr2 92173109 92173171 -158514683 - L1ME3 LINE L1 -213 5957 5893 216 0 0 0 chr2 92173171 92173195 -158514659 + (GA)n Simple_repeat Simple_repeat 2 25 0 2109 85 11 7 chr2 92173195 92173465 -158514389 - AluSg SINE Alu -39 271 1 338 300 38 88 chr2 92173465 92173718 -158514136 - L1ME3 LINE L1 -275 5895 5657 1850 202 80 12 chr2 92173742 92174232 -158513622 - Charlie1b DNA MER1_type 0 523 1 6827 63 4 42 chr2 92174307 92175250 -158512604 - L1PA8 LINE L1 -1 6171 5265 445 303 6 13 chr2 92175247 92175412 -158512442 - L1M2 LINE L1 -613 5551 5403 * 1061 164 127 18 chr2 92176077 92176297 -158511557 + MLT1D LTR MaLR 262 505 0 294 310 0 0 chr2 92176482 92176569 -158511285 + L2 LINE L2 3182 3268 -4 1627 216 192 4 chr2 92176586 92177087 -158510767 - MLT1G1 LTR MaLR 0 595 1 397 308 176 30 chr2 92177092 92177634 -158510220 - L2 LINE L2 0 3313 2689 846 212 0 12 chr2 92178028 92178193 -158509661 - FRAM SINE Alu -3 163 1 560 189 75 0 chr2 92178863 92178969 -158508885 + MER81 DNA DNA 1 114 0 473 274 71 67 chr2 92179119 92179301 -158508553 - MIR SINE MIR -5 257 72 2342 113 0 0 chr2 92179301 92179611 -158508243 + AluSx SINE Alu 1 310 -2 473 274 71 67 chr2 92179611 92179683 -158508171 - MIR SINE MIR -190 72 2 2054 66 87 18 chr2 92181133 92181419 -158506435 + AluY SINE Alu 1 306 -5 1920 135 50 0 chr2 92181658 92181940 -158505914 - AluSx SINE Alu -16 296 1 900 284 18 54 chr2 92182258 92182363 -158505491 - LTR16C LTR ERVL 0 491 384 2149 136 3 0 chr2 92182363 92182672 -158505182 + AluSq SINE Alu 1 310 -3 900 284 18 54 chr2 92182672 92182897 -158504957 - LTR16C LTR ERVL -107 384 173 1487 257 65 49 chr2 92182897 92183885 -158503969 + L1ME LINE L1 738 1776 -4485 1239 152 8 70 chr2 92183903 92184147 -158503707 + AluJo SINE Alu 84 312 0 1699 152 57 24 chr2 92184170 92184466 -158503388 + AluJb SINE Alu 5 310 -2 1684 247 65 61 chr2 92184468 92184658 -158503196 + L1ME LINE L1 1790 1978 -4102 1394 219 61 25 chr2 92184658 92185019 -158502835 + MLT1A2 LTR MaLR 1 374 0 1684 247 65 61 chr2 92185019 92185552 -158502302 + L1ME LINE L1 1978 2694 -3386 784 176 8 0 chr2 92185552 92185683 -158502171 + FLAM_C SINE Alu 1 132 -1 1684 247 65 61 chr2 92185683 92185805 -158502049 + L1ME LINE L1 2694 2814 -3266 952 184 52 0 chr2 92185824 92185998 -158501856 - MER20 DNA MER1_type -33 186 4 1778 255 67 16 chr2 92186001 92186445 -158501409 + L1ME LINE L1 2810 3297 -2783 1810 161 23 20 chr2 92186445 92186750 -158501104 + AluJb SINE Alu 1 306 -6 1778 255 67 16 chr2 92186750 92186936 -158500918 + L1ME LINE L1 3297 3472 -2608 1639 180 49 39 chr2 92186937 92187291 -158500563 - Tigger7 DNA MER2_type -1 2490 1 225 258 0 56 chr2 92187661 92187750 -158500104 + L1MC4 LINE L1 6616 6699 -1343 2296 100 0 0 chr2 92189064 92189364 -158498490 - AluSx SINE Alu -12 300 1 180 310 35 86 chr2 92190417 92190533 -158497321 - MER5A DNA MER1_type -21 168 59 2358 85 3 0 chr2 92191130 92191425 -158496429 - AluSg SINE Alu -14 296 1 1166 269 99 48 chr2 92191529 92191757 -158496097 - L2 LINE L2 -455 2859 2644 2042 128 14 7 chr2 92191757 92192054 -158495800 + AluSx SINE Alu 1 299 -13 1166 269 99 48 chr2 92192054 92192534 -158495320 - L2 LINE L2 -670 2644 2115 1016 229 104 11 chr2 92192555 92193137 -158494717 - LTR50 LTR ERVL -2 793 2 771 172 0 0 chr2 92193390 92193548 -158494306 + FLAM_C SINE Alu 2 159 0 2050 286 65 27 chr2 92193553 92193861 -158493993 - ERVL LTR ERVL -280 5484 5189 1878 143 22 53 chr2 92193861 92194030 -158493824 + MER7A DNA MER2_type 2 154 -2884 2380 88 0 0 chr2 92194030 92194324 -158493530 - AluSc SINE Alu -15 294 1 1878 143 22 53 chr2 92194324 92194510 -158493344 + MER7A DNA MER2_type 154 344 -2 2050 286 65 27 chr2 92194510 92194788 -158493066 - ERVL LTR ERVL -575 5189 4862 2352 113 0 0 chr2 92194788 92195097 -158492757 + AluSq SINE Alu 1 309 -4 2050 286 65 27 chr2 92195097 92195246 -158492608 - ERVL LTR ERVL -902 4862 4720 266 268 73 12 chr2 92195303 92195385 -158492469 - ERVL LTR ERVL -2091 3673 3587 3806 304 40 6 chr2 92195407 92196603 -158491251 - ERVL LTR ERVL -2580 3184 1948 1313 264 122 4 chr2 92196838 92197289 -158490565 - LTR50 LTR ERVL 0 795 292 1928 118 7 31 chr2 92197354 92197672 -158490182 - AluJb SINE Alu 0 311 1 478 355 35 5 chr2 92197672 92197869 -158489985 - ERVL LTR ERVL -4062 1702 1500 373 330 111 7 chr2 92198124 92198421 -158489433 - ERVL LTR ERVL -4574 1190 863 456 320 51 24 chr2 92198477 92198730 -158489124 - ERVL LTR ERVL -5070 694 435 2039 219 155 36 chr2 92199120 92199259 -158488595 - LTR50 LTR ERVL -8 770 649 7644 38 1 0 chr2 92199259 92200941 -158486913 + L1PA5 LINE L1 4456 6154 0 2039 219 155 36 chr2 92200941 92201499 -158486355 - LTR50 LTR ERVL -129 649 5 238 315 14 0 chr2 92201503 92201576 -158486278 + HAL1 LINE L1 1763 1836 -671 227 333 0 0 chr2 92201767 92201836 -158486018 + MIR SINE MIR 194 262 0 1821 125 31 123 chr2 92201981 92202090 -158485764 + L1PA16 LINE L1 5803 5920 -246 725 150 24 31 chr2 92202090 92202217 -158485637 + FLAM_C SINE Alu 5 130 -3 1821 125 31 123 chr2 92202217 92202438 -158485416 + L1PA16 LINE L1 5920 6094 -72 1889 172 0 3 chr2 92202438 92202735 -158485119 - AluJo SINE Alu -16 296 1 1821 125 31 123 chr2 92202735 92202794 -158485060 + L1PA16 LINE L1 6094 6157 -9 1732 200 57 67 chr2 92202891 92203401 -158484453 + MLT1D LTR MaLR 1 505 0 2204 119 0 0 chr2 92203640 92203934 -158483920 - AluSx SINE Alu -18 294 1 638 307 133 28 chr2 92204072 92204537 -158483317 + L2 LINE L2 2782 3294 -19 196 304 101 14 chr2 92204849 92204899 -158482955 + MIR SINE MIR 32 76 -186 1848 152 82 27 chr2 92204899 92205267 -158482587 - MLT1B LTR MaLR 0 390 3 196 304 101 14 chr2 92205267 92205364 -158482490 + MIR SINE MIR 76 192 -70 578 237 158 68 chr2 92205380 92205449 -158482405 - MLT1G1 LTR MaLR 0 595 534 2110 144 0 7 chr2 92205449 92205755 -158482099 - AluSx SINE Alu -8 304 1 578 237 158 68 chr2 92205755 92205931 -158481923 - MLT1G1 LTR MaLR -61 534 312 267 145 13 26 chr2 92205946 92206022 -158481832 + CT-rich Low_complexity Low_complexity 2 76 0 810 232 88 38 chr2 92206074 92206342 -158481512 - MLT1G1 LTR MaLR -305 250 1 200 279 0 16 chr2 92206906 92206967 -158480887 + CT-rich Low_complexity Low_complexity 3 62 0 2368 114 34 8 chr2 92206996 92207354 -158480500 + L1PA16 LINE L1 5800 6166 0 2125 94 47 17 chr2 92207357 92207655 -158480199 + AluSg SINE Alu 1 307 -3 2022 73 44 4 chr2 92207878 92208151 -158479703 + AluSg SINE Alu 1 284 -26 196 231 0 0 chr2 92208617 92208656 -158479198 + MIR SINE MIR 108 146 -62 2547 57 0 3 chr2 92210403 92210703 -158477151 - AluY SINE Alu -12 299 1 802 215 18 68 chr2 92210710 92210929 -158476925 - AluJo SINE Alu -18 294 87 2203 172 18 62 chr2 92211469 92211547 -158476307 + MLT1C LTR MaLR 1 81 -386 2298 110 0 0 chr2 92211547 92211855 -158475999 + AluSx SINE Alu 1 308 -4 2203 172 18 62 chr2 92211855 92211980 -158475874 + MLT1C LTR MaLR 81 210 -257 2096 77 42 11 chr2 92211980 92212265 -158475589 + AluY SINE Alu 1 294 -17 2203 172 18 62 chr2 92212265 92212278 -158475576 + MLT1C LTR MaLR 210 222 -245 2248 91 3 26 chr2 92212278 92212585 -158475269 + AluSp SINE Alu 1 300 -13 2203 172 18 62 chr2 92212585 92212854 -158475000 + MLT1C LTR MaLR 222 467 0 261 283 121 57 chr2 92213878 92214249 -158473605 + L1MEd LINE L1 93 487 -5632 654 205 52 40 chr2 92214253 92214502 -158473352 + L1MC5 LINE L1 7660 7911 -50 2176 115 0 7 chr2 92214541 92214837 -158473017 + AluSx SINE Alu 1 294 -18 1319 271 77 5 chr2 92214875 92215433 -158472421 + L1M4 LINE L1 4252 4849 -1297 242 274 32 84 chr2 92215526 92215679 -158472175 + L1MEd LINE L1 945 1104 -5015 2207 122 0 7 chr2 92215679 92215983 -158471871 + AluSx SINE Alu 1 302 -10 242 274 32 84 chr2 92215983 92216075 -158471779 + L1MEd LINE L1 1104 1176 -4943 2461 90 0 0 chr2 92216075 92216376 -158471478 + AluSx SINE Alu 1 301 -11 242 274 32 84 chr2 92216376 92216414 -158471440 + L1MEd LINE L1 1176 1214 -4905 2213 128 0 0 chr2 92216904 92217208 -158470646 + AluSx SINE Alu 5 308 -4 466 149 160 11 chr2 92217361 92217455 -158470399 + FLAM_C SINE Alu 2 109 -34 225 0 0 0 chr2 92217462 92217487 -158470367 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 2443 86 0 0 chr2 92217775 92218066 -158469788 + AluSc SINE Alu 1 291 -18 1830 193 14 9 chr2 92218420 92218768 -158469086 - MLT1A1 LTR MaLR -4 361 12 426 329 55 52 chr2 92218859 92219242 -158468612 + L1MEd LINE L1 600 983 -5136 2152 102 54 3 chr2 92219300 92219595 -158468259 - AluSq SINE Alu -3 310 1 1003 91 0 0 chr2 92219642 92219774 -158468080 - AluSg/x SINE Alu 0 310 179 2458 82 0 0 chr2 92220082 92220388 -158467466 - AluY SINE Alu -5 306 1 643 226 89 16 chr2 92220861 92221051 -158466803 - AluJo SINE Alu -106 206 3 2167 110 3 13 chr2 92221059 92221358 -158466496 - AluSx SINE Alu -16 296 1 36 53 0 0 chr2 92221392 92221449 -158466405 + AT_rich Low_complexity Low_complexity 1 57 0 846 157 0 8 chr2 92221453 92221587 -158466267 - FLAM_C SINE Alu 0 133 1 2511 70 0 0 chr2 92221591 92221891 -158465963 - AluY SINE Alu -11 300 1 1159 164 58 0 chr2 92221930 92222138 -158465716 - AluJo SINE Alu -8 304 85 510 210 0 57 chr2 92222138 92222262 -158465592 - FAM SINE Alu -60 125 9 739 167 28 21 chr2 92223000 92223144 -158464710 - L1MB7 LINE L1 -19 6165 6021 900 64 0 0 chr2 92223144 92223254 -158464600 + AluSg/x SINE Alu 198 307 -3 1059 137 17 125 chr2 92223255 92223461 -158464393 - L1MB7 LINE L1 -153 6031 5889 1713 133 0 0 chr2 92223461 92223695 -158464159 - AluSx SINE Alu -73 239 6 1059 137 17 125 chr2 92223695 92223793 -158464061 - L1MB7 LINE L1 -295 5889 5782 837 156 0 94 chr2 92223793 92223850 -158464004 - MER46A DNA MER2_type -2495 236 175 2565 54 3 0 chr2 92223850 92224145 -158463709 - AluSp SINE Alu -15 298 3 837 156 0 94 chr2 92224145 92224267 -158463587 - MER46A DNA MER2_type -2556 175 74 373 167 139 0 chr2 92224701 92224773 -158463081 - MER46A DNA MER2_type -154 82 1 2093 166 36 110 chr2 92224773 92225195 -158462659 - L1MB7 LINE L1 -401 5783 5404 1653 186 3 0 chr2 92225195 92225502 -158462352 - AluJo SINE Alu -4 308 1 2093 166 36 110 chr2 92225502 92225749 -158462105 - L1MB7 LINE L1 -780 5404 5140 240 35 0 0 chr2 92225962 92225991 -158461863 + (TTTTC)n Simple_repeat Simple_repeat 3 31 0 225 154 0 0 chr2 92226707 92226746 -158461108 + GA-rich Low_complexity Low_complexity 2 40 0 330 333 62 48 chr2 92227026 92227236 -158460618 + MIR SINE MIR 2 214 -48 2237 95 0 3 chr2 92227399 92227704 -158460150 - AluSc SINE Alu -5 304 1 682 130 0 10 chr2 92227909 92228009 -158459845 + U6 snRNA snRNA 3 101 -6 21 0 0 0 chr2 92228009 92228030 -158459824 + AT_rich Low_complexity Low_complexity 1 21 0 209 32 0 32 chr2 92228105 92228136 -158459718 + (TTTTC)n Simple_repeat Simple_repeat 3 32 0 * 264 59 0 0 chr2 92228135 92228169 -158459685 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 1771 166 3 3 chr2 92228169 92228471 -158459383 - AluJb SINE Alu -10 302 1 880 144 7 0 chr2 92228499 92228652 -158459202 - L1MA9 LINE L1 -2 6310 6157 2425 53 0 3 chr2 92228661 92228963 -158458891 - AluY SINE Alu -10 301 1 1571 152 56 36 chr2 92228987 92229289 -158458565 + AluJb SINE Alu 1 308 -4 2210 103 0 0 chr2 92229652 92229954 -158457900 + AluSx SINE Alu 3 304 -8 2809 221 78 26 chr2 92229985 92230429 -158457425 - L1ME2 LINE L1 -9 6155 5736 1189 164 101 140 chr2 92230429 92230788 -158457066 - MSTD LTR MaLR -4 392 49 1616 188 7 0 chr2 92230788 92231091 -158456763 + AluJo SINE Alu 1 305 -7 1189 164 101 140 chr2 92231091 92231139 -158456715 - MSTD LTR MaLR -347 49 1 2809 221 78 26 chr2 92231139 92231229 -158456625 - L1ME2 LINE L1 -428 5736 5652 1990 108 3 45 chr2 92231229 92231543 -158456311 - AluSg1 SINE Alu -8 301 1 2809 221 78 26 chr2 92231543 92231814 -158456040 - L1ME2 LINE L1 -512 5652 5307 350 87 0 0 chr2 92231816 92231862 -158455992 + Alu SINE Alu 1 46 -255 307 345 25 8 chr2 92231866 92231985 -158455869 + MIR SINE MIR 90 210 -52 453 125 188 0 chr2 92232028 92232108 -158455746 + AluJb SINE Alu 167 261 -51 449 179 0 0 chr2 92232118 92232196 -158455658 + FLAM SINE Alu 48 125 -18 1595 165 10 7 chr2 92232253 92232544 -158455310 - AluSq SINE Alu -21 292 1 613 284 116 9 chr2 92232561 92232888 -158454966 - L1ME2 LINE L1 -884 5262 4901 1968 110 7 14 chr2 92232898 92233188 -158454666 + AluSx SINE Alu 1 288 -24 522 317 46 46 chr2 92233208 92233448 -158454406 - L1ME2 LINE L1 -2599 3547 3308 206 299 52 26 chr2 92233449 92233526 -158454328 + L3 LINE CR1 1494 1572 -5 333 0 0 0 chr2 92234191 92234228 -158453626 + (CA)n Simple_repeat Simple_repeat 2 38 0 282 284 37 37 chr2 92234972 92235106 -158452748 - L1ME3A LINE L1 0 6170 6037 591 249 126 50 chr2 92235235 92235552 -158452302 - L1ME3A LINE L1 -208 5962 5622 1525 167 4 25 chr2 92235665 92235941 -158451913 + AluJo SINE Alu 24 293 -19 1438 188 40 23 chr2 92235958 92236459 -158451395 + MLT1F1 LTR MaLR 1 561 -6 188 152 43 0 chr2 92236597 92236643 -158451211 + CT-rich Low_complexity Low_complexity 1 48 0 260 236 12 36 chr2 92236693 92236858 -158450996 + CT-rich Low_complexity Low_complexity 3 163 0 1530 145 31 200 chr2 92237010 92237519 -158450335 + MSTA LTR MaLR 4 426 0 1878 115 0 37 chr2 92237616 92237945 -158449909 - AluSx SINE Alu 0 318 1 337 308 126 35 chr2 92238291 92238489 -158449365 - L1MC4a LINE L1 -1882 5926 5711 798 170 0 15 chr2 92238496 92238631 -158449223 + FLAM_C SINE Alu 1 133 0 1698 164 7 20 chr2 92238636 92238941 -158448913 + AluJb SINE Alu 1 301 -11 1465 190 10 33 chr2 92238946 92239251 -158448603 + AluJo SINE Alu 1 298 -14 403 197 0 0 chr2 92239789 92239855 -158447999 - MER2 DNA MER2_type 0 345 280 1791 133 18 11 chr2 92239891 92239920 -158447934 - MER2 DNA MER2_type -58 287 260 1624 161 3 33 chr2 92239920 92240225 -158447629 + AluJb SINE Alu 3 298 -14 1791 133 18 11 chr2 92240225 92240480 -158447374 - MER2 DNA MER2_type -85 260 1 488 218 201 38 chr2 92240838 92241177 -158446677 - Charlie2 DNA MER1_type -1 2861 2468 1729 156 0 10 chr2 92241183 92241472 -158446382 + AluJo SINE Alu 13 298 -14 191 309 0 0 chr2 92241475 92241530 -158446324 - L2 LINE L2 -692 2622 2568 805 235 61 31 chr2 92241684 92241978 -158445876 - Charlie2b DNA MER1_type -936 1846 1544 681 212 0 0 chr2 92241981 92242099 -158445755 - FLAM_C SINE Alu -15 118 1 648 267 16 0 chr2 92242224 92242415 -158445439 + L1MC5 LINE L1 7723 7916 -45 1479 181 33 37 chr2 92242428 92242727 -158445127 + AluJo SINE Alu 1 298 -14 1816 120 51 4 chr2 92242800 92243075 -158444779 + AluSx SINE Alu 1 288 -24 364 243 10 0 chr2 92243101 92243204 -158444650 - Charlie2b DNA MER1_type -1340 1442 1339 1556 144 0 126 chr2 92243218 92243551 -158444303 + AluJb SINE Alu 1 291 -11 407 179 0 0 chr2 92243647 92243714 -158444140 + U6 snRNA snRNA 7 73 -34 2362 63 7 0 chr2 92243714 92244014 -158443840 - AluSp SINE Alu -11 302 1 28 0 0 0 chr2 92244018 92244046 -158443808 + AT_rich Low_complexity Low_complexity 1 28 0 229 224 0 17 chr2 92244046 92244104 -158443750 - Charlie2b DNA MER1_type -1576 1206 1150 372 337 63 11 chr2 92244330 92244425 -158443429 - L1M4 LINE L1 -2586 3560 3471 2314 65 7 3 chr2 92244425 92244735 -158443119 - AluY SINE Alu 0 311 1 372 337 63 11 chr2 92244735 92244814 -158443040 - L1M4 LINE L1 -2675 3471 3377 2210 134 11 19 chr2 92244845 92245194 -158442660 - L1MB5 LINE L1 0 6174 5827 1926 145 3 13 chr2 92245194 92245504 -158442350 - AluJo SINE Alu -5 307 1 2210 134 11 19 chr2 92245504 92245519 -158442335 - L1MB5 LINE L1 -347 5827 5813 1937 136 0 10 chr2 92245547 92245856 -158441998 + AluSx SINE Alu 1 306 -6 2272 94 0 0 chr2 92247241 92247540 -158440314 - AluSx SINE Alu -13 299 1 3377 125 40 75 chr2 92247588 92247989 -158439865 - L1MB4 LINE L1 -57 6123 5709 2283 75 0 0 chr2 92247989 92248282 -158439572 + AluSq SINE Alu 1 293 -20 3377 125 40 75 chr2 92248282 92248424 -158439430 - L1MB4 LINE L1 -471 5709 5604 2980 68 2 10 chr2 92248424 92248824 -158439030 - L1PB1 LINE L1 -1 6150 5754 3377 125 40 75 chr2 92248824 92248936 -158438918 - L1MB4 LINE L1 -576 5604 5490 1237 125 5 15 chr2 92248936 92249136 -158438718 - AluSq SINE Alu -11 302 105 2142 107 0 3 chr2 92249329 92249627 -158438227 - AluSx SINE Alu -15 297 1 1301 129 5 5 chr2 92249731 92249933 -158437921 - Tigger1 DNA MER2_type 0 2418 2217 696 169 0 8 chr2 92249939 92250057 -158437797 + FLAM_C SINE Alu 5 121 -22 11009 105 15 30 chr2 92250070 92250713 -158437141 - Tigger1 DNA MER2_type -188 2230 1579 1837 97 0 8 chr2 92250713 92250972 -158436882 - AluSg SINE Alu -15 295 39 11009 105 15 30 chr2 92250972 92251999 -158435855 - Tigger1 DNA MER2_type -839 1579 585 1550 139 8 0 chr2 92252034 92252286 -158435568 + AluJb SINE Alu 58 311 -1 776 161 8 0 chr2 92252293 92252423 -158435431 - Tigger1 DNA MER2_type -2118 300 170 543 167 0 0 chr2 92252425 92252509 -158435345 + AluSg/x SINE Alu 191 274 -38 561 152 65 0 chr2 92252509 92252601 -158435253 - Tigger1 DNA MER2_type -2260 158 61 824 161 0 0 chr2 92252617 92252741 -158435113 - AluJb SINE Alu -187 125 2 364 194 0 14 chr2 92252741 92252813 -158435041 - Tigger1 DNA MER2_type -2342 76 6 3040 97 14 2 chr2 92252814 92253238 -158434616 + L1PA10 LINE L1 5729 6157 -11 201 245 128 43 chr2 92253306 92253400 -158434454 - MIR3 SINE MIR -2 206 105 417 186 43 0 chr2 92253554 92253624 -158434230 - MER30 DNA MER1_type 0 230 158 2269 87 3 13 chr2 92253955 92254266 -158433588 + AluSq SINE Alu 1 308 -5 2239 57 3 14 chr2 92254266 92254561 -158433293 + AluY SINE Alu 1 293 -18 270 0 0 0 chr2 92254561 92254591 -158433263 + (CA)n Simple_repeat Simple_repeat 2 31 0 193 291 47 47 chr2 92254851 92254937 -158432917 - L2 LINE L2 -26 3287 3202 328 250 0 0 chr2 92255133 92255205 -158432649 + MIR SINE MIR 58 129 -133 3403 117 34 2 chr2 92255209 92255705 -158432149 + MER75 DNA T2_type 3 514 0 226 260 52 0 chr2 92255874 92255951 -158431903 + GA-rich Low_complexity Low_complexity 4 84 0 201 268 84 14 chr2 92256557 92256628 -158431226 - MIR SINE MIR -28 234 159 757 211 112 100 chr2 92256631 92256779 -158431075 + Tigger7 DNA MER2_type 2 156 -2331 1909 157 0 3 chr2 92256779 92257092 -158430762 + AluSx SINE Alu 1 312 0 757 211 112 100 chr2 92257092 92257203 -158430651 + Tigger7 DNA MER2_type 156 264 -2223 641 170 10 0 chr2 92257248 92257348 -158430506 + Tigger7 DNA MER2_type 2487 2587 0 610 271 43 0 chr2 92257348 92257488 -158430366 - MIR SINE MIR -105 157 12 31 0 0 0 chr2 92257875 92257906 -158429948 + AT_rich Low_complexity Low_complexity 1 31 0 258 116 0 0 chr2 92258253 92258296 -158429558 + (TATG)n Simple_repeat Simple_repeat 2 44 0 288 328 57 8 chr2 92258339 92258461 -158429393 + MIR3 SINE MIR 38 165 -43 1601 160 17 13 chr2 92259526 92259826 -158428028 + AluJo SINE Alu 5 305 -7 2203 72 0 10 chr2 92259911 92260202 -158427652 - AluY SINE Alu -23 288 1 211 226 19 19 chr2 92260717 92260770 -158427084 + L2 LINE L2 3255 3307 -6 234 246 15 15 chr2 92260897 92260962 -158426892 + MLT1J1 LTR MaLR 96 160 -286 254 185 62 86 chr2 92261130 92261151 -158426703 + MLT1J2 LTR MaLR 370 390 -60 2157 146 20 62 chr2 92261151 92261379 -158426475 - MLT1B LTR MaLR -2 388 183 2066 122 3 0 chr2 92261379 92261673 -158426181 - AluSx SINE Alu -17 295 1 2157 146 20 62 chr2 92261673 92261849 -158426005 - MLT1B LTR MaLR -207 183 1 254 185 62 86 chr2 92261849 92261908 -158425946 + MLT1J2 LTR MaLR 390 448 -2 583 256 18 18 chr2 92262025 92262189 -158425665 + MER5A DNA MER1_type 3 166 -23 357 299 196 24 chr2 92262861 92263279 -158424575 - L2 LINE L2 -541 2773 2284 1131 202 13 4 chr2 92263279 92263517 -158424337 + Tigger6 DNA MER2_type 1 240 -843 231 296 62 0 chr2 92263958 92264039 -158423815 + MIR SINE MIR 117 202 -60 313 288 54 39 chr2 92264442 92264627 -158423227 + MIR SINE MIR 17 204 -58 572 137 10 0 chr2 92264949 92265051 -158422803 + CT-rich Low_complexity Low_complexity 1 103 0 575 269 110 35 chr2 92265102 92265392 -158422462 - L2 LINE L2 -1 3312 3001 215 333 51 7 chr2 92266144 92266282 -158421572 - MIR3 SINE MIR -51 157 14 505 158 80 10 chr2 92266375 92266486 -158421368 + L1MA8 LINE L1 6028 6136 -155 2175 106 3 0 chr2 92266956 92267320 -158420534 - AluSq SINE Alu 0 365 1 489 256 67 11 chr2 92267474 92267654 -158420200 - MLT1L LTR MaLR -4 611 422 257 227 136 0 chr2 92267737 92267825 -158420029 - MLT1L LTR MaLR -373 242 143 257 202 169 34 chr2 92267927 92268016 -158419838 - L2 LINE L2 -6 3307 3207 454 238 163 6 chr2 92268063 92268223 -158419631 + MIR SINE MIR 78 262 0 1792 169 0 3 chr2 92268223 92268524 -158419330 + AluJo SINE Alu 1 300 -12 1737 208 102 9 chr2 92268570 92269003 -158418851 - Charlie4a DNA MER1_type -19 489 17 2123 121 0 0 chr2 92269152 92269450 -158418404 + AluSx SINE Alu 1 298 -14 458 216 52 52 chr2 92269708 92269861 -158417993 + MIR3 SINE MIR 1 153 -55 285 75 0 0 chr2 92269931 92269971 -158417883 + (TG)n Simple_repeat Simple_repeat 1 40 0 210 180 20 20 chr2 92270693 92270743 -158417111 + G-rich Low_complexity Low_complexity 6 55 0 529 287 163 5 chr2 92272356 92272565 -158415289 + MIR SINE MIR 3 244 -18 2025 169 29 54 chr2 92272989 92273398 -158414456 - MER47B DNA MER2_type 0 418 20 259 327 67 0 chr2 92273410 92273514 -158414340 - MIR SINE MIR -70 138 28 291 28 0 0 chr2 92273554 92273590 -158414264 + (TG)n Simple_repeat Simple_repeat 2 37 0 1647 156 56 38 chr2 92273604 92273943 -158413911 - MLT1B LTR MaLR -39 351 7 537 281 85 35 chr2 92274483 92274682 -158413172 + MIR SINE MIR 33 241 -21 796 221 154 17 chr2 92274684 92274924 -158412930 + ORSL DNA AcHobo 1 273 -2 297 205 12 24 chr2 92277458 92277541 -158410313 + L2 LINE L2 3015 3096 -176 2207 114 0 10 chr2 92277646 92277953 -158409901 - AluSx SINE Alu -8 304 1 210 370 98 0 chr2 92278001 92278093 -158409761 + L2 LINE L2 3172 3272 0 225 336 78 0 chr2 92278236 92278352 -158409502 + L3 LINE CR1 975 1099 -478 303 219 38 0 chr2 92278485 92278590 -158409264 + GA-rich Low_complexity Low_complexity 1 109 0 660 240 52 0 chr2 92278712 92278901 -158408953 - MIR SINE MIR -34 228 21 187 318 0 0 chr2 92278914 92278980 -158408874 + MIR SINE MIR 183 248 -14 4189 126 66 47 chr2 92279473 92280418 -158407436 + L1MB7 LINE L1 5082 6041 -143 876 2 94 0 chr2 92280519 92280845 -158407009 + GA-rich Low_complexity Low_complexity 1 537 0 237 283 113 47 chr2 92280953 92281080 -158406774 - MIR SINE MIR -66 142 11 1804 108 0 0 chr2 92281349 92281581 -158406273 - AluSg/x SINE Alu -15 297 66 552 235 172 5 chr2 92282055 92282259 -158405595 + MIR SINE MIR 25 262 0 1936 143 21 11 chr2 92285010 92285297 -158402557 - AluJo SINE Alu -21 291 2 459 174 22 11 chr2 92286071 92286163 -158401691 + Charlie4 DNA MER1_type 1865 1957 -4 258 287 115 11 chr2 92287014 92287101 -158400753 - MER5A DNA MER1_type -85 104 9 445 234 133 21 chr2 92287158 92287314 -158400540 + MER5A DNA MER1_type 4 182 -7 201 118 59 0 chr2 92287488 92287522 -158400332 + GA-rich Low_complexity Low_complexity 4 39 0 1194 188 48 0 chr2 92287625 92287833 -158400021 - AluJo SINE Alu -94 218 1 881 109 39 8 chr2 92287843 92287971 -158399883 - AluSg/x SINE Alu -16 294 163 206 211 70 18 chr2 92288000 92288057 -158399797 - MER5B DNA MER1_type -117 61 2 1043 163 149 9 chr2 92288484 92288699 -158399155 + L1M3 LINE L1 5429 5673 -498 704 136 25 12 chr2 92288702 92288864 -158398990 - AluSg/x SINE Alu -9 301 138 1046 148 0 55 chr2 92288968 92289150 -158398704 + AluJb SINE Alu 120 291 -21 730 139 0 60 chr2 92289150 92289292 -158398562 - L1M4 LINE L1 -1600 4546 4414 1895 120 4 4 chr2 92289292 92289566 -158398288 - AluSx SINE Alu 0 312 39 730 139 0 60 chr2 92289566 92289589 -158398265 - L1M4 LINE L1 -1732 4414 4391 2236 105 0 7 chr2 92289589 92289917 -158397937 - AluSx SINE Alu 0 326 1 757 141 63 0 chr2 92289970 92290112 -158397742 + MER53 DNA DNA 23 173 -16 1952 123 15 0 chr2 92290112 92290380 -158397474 - AluSx SINE Alu -8 304 33 1930 112 48 0 chr2 92290561 92290830 -158397024 - AluSx SINE Alu -30 282 1 2285 94 3 0 chr2 92292656 92292954 -158394900 - AluSp SINE Alu -14 299 1 2161 127 7 0 chr2 92292954 92293253 -158394601 - AluSx SINE Alu -10 302 1 260 221 52 26 chr2 92293365 92293442 -158394412 - L1ME4a LINE L1 -79 6042 5964 716 165 9 0 chr2 92293519 92293634 -158394220 + AluSq/x SINE Alu 2 117 -196 39 0 0 0 chr2 92293639 92293678 -158394176 + AT_rich Low_complexity Low_complexity 1 39 0 1728 147 13 17 chr2 92294187 92294486 -158393368 + AluSx SINE Alu 1 298 -14 396 363 60 8 chr2 92294491 92294725 -158393129 - ERVL LTR ERVL -2357 3297 3052 1513 96 39 82 chr2 92294765 92294858 -158392996 - Tigger7 DNA MER2_type 0 2491 2396 2331 107 7 0 chr2 92294858 92295168 -158392686 - AluSx SINE Alu 0 312 1 1513 96 39 82 chr2 92295168 92295355 -158392499 - Tigger7 DNA MER2_type -95 2396 2223 2074 126 0 3 chr2 92295356 92295649 -158392205 - AluSx SINE Alu -15 297 6 430 245 40 40 chr2 92295681 92295752 -158392102 - AluJo/FRAM SINE Alu -13 299 229 2164 134 0 10 chr2 92295752 92296065 -158391789 - AluSx SINE Alu -2 310 1 430 245 40 40 chr2 92296065 92296144 -158391710 - AluJo/FRAM SINE Alu -82 230 149 426 222 37 0 chr2 92296156 92296237 -158391617 - Tigger7 DNA MER2_type -255 84 1 766 346 71 33 chr2 92296245 92296875 -158390979 - ERVL LTR ERVL -2678 3015 2323 2069 96 0 41 chr2 92296970 92297314 -158390540 + AluSx SINE Alu 1 332 0 189 0 0 0 chr2 92297557 92297578 -158390276 + (A)n Simple_repeat Simple_repeat 1 21 0 2235 232 31 29 chr2 92297626 92297710 -158390144 + LTR40a LTR ERVL 1 83 -436 2333 104 0 7 chr2 92297710 92298017 -158389837 - AluSq SINE Alu -8 305 1 2235 232 31 29 chr2 92298017 92298444 -158389410 + LTR40a LTR ERVL 83 513 -6 317 316 76 6 chr2 92298455 92298626 -158389228 + L1M4 LINE L1 3743 3925 -2221 1917 117 35 48 chr2 92298693 92298983 -158388871 - AluSx SINE Alu -26 286 1 2273 126 0 0 chr2 92300761 92301063 -158386791 + AluSx SINE Alu 1 302 -10 638 226 68 0 chr2 92301203 92301349 -158386505 + MER58 DNA MER1_type 1 156 -2264 733 128 0 0 chr2 92301351 92301453 -158386401 + U6 snRNA snRNA 1 102 -5 2202 125 0 7 chr2 92301453 92301750 -158386104 - AluSx SINE Alu -17 295 1 2184 92 10 10 chr2 92302016 92302311 -158385543 + AluSc SINE Alu 1 295 -14 310 280 0 0 chr2 92302417 92302492 -158385362 + Charlie8 DNA MER1_type 1 75 -2342 276 169 31 62 chr2 92302556 92302621 -158385233 + Charlie8 DNA MER1_type 1363 1418 -999 1678 167 4 0 chr2 92303347 92303605 -158384249 - AluJo SINE Alu -31 281 23 1689 170 85 108 chr2 92303608 92303885 -158383969 + MSTB LTR MaLR 1 266 -160 2067 160 0 10 chr2 92303885 92304197 -158383657 - AluSx SINE Alu -2 310 2 1689 170 85 108 chr2 92304197 92304355 -158383499 + MSTB LTR MaLR 266 426 0 2520 180 37 24 chr2 92304355 92304703 -158383151 + MSTB-int LTR MaLR 1 360 -1291 2398 88 3 3 chr2 92304703 92305008 -158382846 - AluSx SINE Alu -7 305 1 2520 180 37 24 chr2 92305008 92305199 -158382655 + MSTB-int LTR MaLR 360 547 -1104 1560 112 0 0 chr2 92305215 92305420 -158382434 + AluSg/x SINE Alu 98 302 -10 212 306 0 0 chr2 92305581 92305643 -158382211 - MER91 DNA MER1_type -78 62 1 21 36 0 0 chr2 92305953 92305981 -158381873 + AT_rich Low_complexity Low_complexity 1 28 0 977 174 12 24 chr2 92306027 92306194 -158381660 - FAM SINE Alu -7 168 4 436 231 122 0 chr2 92306383 92306530 -158381324 - MER103 DNA DNA 0 166 2 261 313 130 0 chr2 92306794 92306909 -158380945 + MIR3 SINE MIR 30 159 -49 1150 242 141 69 chr2 92306911 92307416 -158380438 + MER20B DNA MER1_type 17 557 -226 1955 105 59 21 chr2 92307498 92307784 -158380070 + AluSq SINE Alu 1 297 -16 1182 135 0 0 chr2 92307784 92307954 -158379900 + AluSg/x SINE Alu 132 301 -9 2054 110 3 64 chr2 92307957 92308284 -158379570 + AluSx SINE Alu 1 307 -5 467 163 0 35 chr2 92308286 92308372 -158379482 - AluJo/FLAM SINE Alu -184 128 46 266 248 54 60 chr2 92308507 92308656 -158379198 + MER20B DNA MER1_type 627 774 -9 297 190 37 21 chr2 92309758 92309865 -158377989 + L1MB8 LINE L1 5479 5588 -580 2464 199 28 35 chr2 92310041 92310541 -158377313 + L1MB8 LINE L1 5551 6048 -130 1939 109 80 0 chr2 92310541 92310815 -158377039 + AluSx SINE Alu 1 296 -16 2464 199 28 35 chr2 92310815 92310891 -158376963 + L1MB8 LINE L1 6048 6123 -55 240 275 25 8 chr2 92311066 92311186 -158376668 + Charlie1 DNA MER1_type 2379 2500 -261 380 250 36 43 chr2 92311189 92311329 -158376525 - L1ME4a LINE L1 -16 6105 5967 1226 191 12 20 chr2 92311882 92312134 -158375720 + MER46C DNA MER2_type 2 251 -87 3001 101 18 18 chr2 92312134 92312578 -158375276 + MLT2A1 LTR ERVL 1 444 0 1139 168 0 0 chr2 92312594 92312767 -158375087 - FRAM SINE Alu -11 165 1 2314 94 7 0 chr2 92312799 92313097 -158374757 + AluSq SINE Alu 1 300 -13 21 0 0 0 chr2 92313103 92313124 -158374730 + AT_rich Low_complexity Low_complexity 1 21 0 3596 227 59 45 chr2 92313284 92314065 -158373789 + L1MD3 LINE L1 4154 4923 -1436 1624 145 24 84 chr2 92314065 92314211 -158373643 + AluJb SINE Alu 1 154 -158 1905 122 65 0 chr2 92314211 92314490 -158373364 + AluSx SINE Alu 5 301 -11 1624 145 24 84 chr2 92314490 92314675 -158373179 + AluJb SINE Alu 154 312 0 3596 227 59 45 chr2 92314675 92315210 -158372644 + L1MD3 LINE L1 4923 5486 -873 2288 85 0 0 chr2 92315210 92315606 -158372248 + AluY SINE Alu 1 396 0 3596 227 59 45 chr2 92315606 92315803 -158372051 + L1MD3 LINE L1 5486 5679 -680 697 217 83 33 chr2 92315806 92315892 -158371962 + L1MD3 LINE L1 5815 5895 -2100 2192 116 0 0 chr2 92315892 92316206 -158371648 + AluSx SINE Alu 1 314 0 697 217 83 33 chr2 92316206 92316341 -158371513 + L1MD3 LINE L1 5895 6022 -1973 396 0 0 0 chr2 92316341 92316385 -158371469 + (CA)n Simple_repeat Simple_repeat 2 45 0 697 217 83 33 chr2 92316385 92316606 -158371248 + L1MD3 LINE L1 6022 7995 0 2008 114 7 23 chr2 92316839 92317145 -158370709 + AluSq SINE Alu 1 301 -12 1126 212 21 77 chr2 92317553 92317693 -158370161 + ERVL LTR ERVL 4385 4531 -1233 2058 143 0 6 chr2 92317693 92318007 -158369847 - AluSx SINE Alu 0 312 1 1126 212 21 77 chr2 92318007 92318206 -158369648 + ERVL LTR ERVL 4531 4705 -1059 3103 78 66 16 chr2 92318245 92318670 -158369184 + MLT2A2 LTR ERVL 1 446 -7 597 100 0 25 chr2 92318670 92318903 -158368951 + AluSx SINE Alu 1 312 0 207 0 0 0 chr2 92319531 92319554 -158368300 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1749 138 36 7 chr2 92319554 92319829 -158368025 - AluJb SINE Alu -29 283 1 650 226 0 29 chr2 92319996 92320133 -158367721 + AluJb SINE Alu 136 268 -44 188 214 107 0 chr2 92320362 92320418 -158367436 - MIR SINE MIR -65 197 136 2012 142 10 0 chr2 92320424 92320719 -158367135 - AluSx SINE Alu -14 298 1 931 161 0 0 chr2 92320939 92321082 -158366772 + FLAM_C SINE Alu 1 143 0 2218 103 0 17 chr2 92321121 92321422 -158366432 + AluSx SINE Alu 1 296 -16 625 292 58 22 chr2 92321775 92322001 -158365853 + MIR SINE MIR 28 261 -1 288 222 12 62 chr2 92322218 92322299 -158365555 - L1MD3 LINE L1 -42 7953 7877 282 73 0 0 chr2 92322300 92322341 -158365513 + (TA)n Simple_repeat Simple_repeat 2 42 0 2299 98 0 0 chr2 92322347 92322634 -158365220 - AluSq SINE Alu -26 287 1 207 224 41 0 chr2 92322659 92322708 -158365146 - MIR SINE MIR -66 142 92 1302 167 27 92 chr2 92322831 92323048 -158364806 - L1MA9 LINE L1 -11 6301 6112 2359 68 10 3 chr2 92323048 92323342 -158364512 + AluY SINE Alu 1 296 -15 1302 167 27 92 chr2 92323342 92323459 -158364395 - L1MA9 LINE L1 -200 6112 5989 210 71 0 0 chr2 92324554 92324582 -158363272 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 221 128 43 0 chr2 92324583 92324630 -158363224 + (TA)n Simple_repeat Simple_repeat 2 50 0 344 188 73 67 chr2 92324631 92324751 -158363103 - AluJo SINE Alu -131 171 96 594 220 28 71 chr2 92324865 92324904 -158362950 - MER58B DNA MER1_type -2089 331 292 2183 127 7 0 chr2 92324904 92325212 -158362642 - AluSq SINE Alu -3 310 1 594 220 28 71 chr2 92325212 92325354 -158362500 - MER58B DNA MER1_type -2128 292 158 837 191 3 0 chr2 92325459 92325775 -158362079 + (CTACT)n Simple_repeat Simple_repeat 1 317 0 336 208 0 0 chr2 92325788 92325894 -158361960 + (CTACT)n Simple_repeat Simple_repeat 2 107 0 2045 128 3 0 chr2 92326611 92326908 -158360946 - AluSx SINE Alu -14 298 1 2388 81 0 0 chr2 92327898 92328207 -158359647 - AluSc SINE Alu 0 309 1 2096 104 0 0 chr2 92328462 92328820 -158359034 + AluSg SINE Alu 1 358 0 2025 98 28 3 chr2 92329856 92330143 -158357711 + AluSg SINE Alu 7 300 -10 1597 208 0 0 chr2 92330215 92330518 -158357336 - AluJo SINE Alu -9 303 1 2034 134 0 7 chr2 92330631 92330937 -158356917 + AluSx SINE Alu 1 304 -8 2403 113 31 6 chr2 92331412 92331767 -158356087 + THE1B LTR MaLR 1 364 0 2102 102 0 0 chr2 92332393 92332710 -158355144 - AluSx SINE Alu 0 317 1 189 209 67 124 chr2 92332935 92333040 -158354814 + L3 LINE CR1 1242 1340 -237 22 88 0 0 chr2 92333107 92333164 -158354690 + AT_rich Low_complexity Low_complexity 1 57 0 1942 120 7 7 chr2 92333187 92333479 -158354375 + AluJb SINE Alu 1 292 -20 2162 111 44 6 chr2 92333479 92333823 -158354031 - L1PA16 LINE L1 -2 6164 5808 255 136 15 30 chr2 92333920 92333986 -158353868 + CT-rich Low_complexity Low_complexity 1 65 0 1982 94 11 0 chr2 92333989 92334254 -158353600 - AluSx SINE Alu -10 302 35 2819 226 45 39 chr2 92334280 92334739 -158353115 - L1ME1 LINE L1 -1 6165 5697 1782 151 39 47 chr2 92334739 92334894 -158352960 + MER46B DNA MER2_type 1 28 -2703 2163 117 0 0 chr2 92334894 92335194 -158352660 - AluSx SINE Alu -12 300 1 1782 151 39 47 chr2 92335194 92335402 -158352452 + MER46B DNA MER2_type 28 236 0 2819 226 45 39 chr2 92335402 92335711 -158352143 - L1ME1 LINE L1 -469 5697 5392 1615 178 13 0 chr2 92335786 92336089 -158351765 + AluJb SINE Alu 1 307 -5 1694 172 7 0 chr2 92336228 92336531 -158351323 - AluJo SINE Alu -7 305 1 1495 192 36 39 chr2 92336534 92336675 -158351179 + L1MB8 LINE L1 5732 5872 -306 2228 78 0 3 chr2 92336675 92336971 -158350883 + AluY SINE Alu 1 295 -16 1495 192 36 39 chr2 92336971 92337163 -158350691 + L1MB8 LINE L1 5872 6064 -114 2012 183 145 2 chr2 92338619 92339061 -158348793 - MLT1D LTR MaLR 0 505 1 233 277 0 15 chr2 92339313 92339378 -158348476 + MIR SINE MIR 85 148 -114 330 284 80 65 chr2 92339487 92339538 -158348316 - MIR3 SINE MIR -1 207 158 2229 114 0 0 chr2 92339538 92339846 -158348008 - AluSx SINE Alu -4 308 1 330 284 80 65 chr2 92339846 92339995 -158347859 - MIR3 SINE MIR -50 158 4 1896 115 10 24 chr2 92340392 92340688 -158347166 + AluSq SINE Alu 1 292 -21 395 238 30 0 chr2 92340699 92340800 -158347054 - L1ME1 LINE L1 -17 6149 6046 1945 144 3 0 chr2 92340800 92341092 -158346762 + AluJo SINE Alu 1 293 -19 1900 121 43 0 chr2 92341092 92341373 -158346481 + AluSx SINE Alu 1 294 -18 1454 223 127 32 chr2 92341388 92341891 -158345963 - L1ME1 LINE L1 -1034 5112 4562 2212 100 0 6 chr2 92342093 92342404 -158345450 + AluSg SINE Alu 1 309 -1 319 318 9 9 chr2 92342404 92342511 -158345343 + ERVL LTR ERVL 4527 4633 -1131 241 314 12 12 chr2 92342897 92342983 -158344871 + GA-rich Low_complexity Low_complexity 3 88 0 1920 109 26 26 chr2 92343041 92343352 -158344502 - AluSx SINE Alu -1 311 1 1116 257 27 14 chr2 92343353 92343645 -158344209 - MLT1A2 LTR MaLR -76 298 3 2346 198 92 59 chr2 92343647 92344005 -158343849 + L1MC4 LINE L1 7353 7745 -297 1574 136 36 53 chr2 92344005 92344307 -158343547 + AluJb SINE Alu 5 301 -11 2346 198 92 59 chr2 92344307 92344614 -158343240 + L1MC4 LINE L1 7745 8040 -2 851 265 90 50 chr2 92344876 92345850 -158342004 + L1MEd LINE L1 576 1533 -4596 2462 60 0 0 chr2 92345851 92346151 -158341703 + AluY SINE Alu 1 300 -11 696 194 8 15 chr2 92346190 92346324 -158341530 + FLAM_C SINE Alu 1 133 0 2186 99 3 0 chr2 92346341 92346644 -158341210 + AluSc SINE Alu 1 304 -5 1694 159 21 7 chr2 92346728 92347017 -158340837 + AluSx SINE Alu 1 293 -19 469 281 106 37 chr2 92347130 92347347 -158340507 + L2 LINE L2 38 239 -3075 1402 171 34 27 chr2 92347347 92347640 -158340214 - AluJo SINE Alu -17 295 1 469 281 106 37 chr2 92347640 92347736 -158340118 + L2 LINE L2 239 2518 -796 1924 122 4 0 chr2 92347956 92348281 -158339573 + AluSg SINE Alu 1 326 0 384 278 69 74 chr2 92348475 92348507 -158339347 + L2 LINE L2 2514 2545 -769 1948 111 7 4 chr2 92348507 92348813 -158339041 + AluSq SINE Alu 4 310 0 384 278 69 74 chr2 92348813 92348995 -158338859 + L2 LINE L2 2545 2728 -586 279 0 0 0 chr2 92349001 92349032 -158338822 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1613 115 91 0 chr2 92349038 92349291 -158338563 - AluSg SINE Alu -34 276 1 2513 51 0 6 chr2 92349292 92349605 -158338249 - AluY SINE Alu 0 311 1 1095 36 0 22 chr2 92349605 92349743 -158338111 - AluSc SINE Alu -174 135 1 401 278 157 31 chr2 92349749 92349972 -158337882 + L2 LINE L2 2725 2975 -339 2030 113 7 3 chr2 92350162 92350471 -158337383 + AluSq SINE Alu 1 310 -3 393 77 0 0 chr2 92350714 92350770 -158337084 + Alu SINE Alu 2 48 -255 2038 113 0 0 chr2 92350904 92351219 -158336635 - AluSx SINE Alu 0 315 1 398 321 137 37 chr2 92351230 92351501 -158336353 - L1MC4a LINE L1 -1638 6170 5873 326 307 88 7 chr2 92351482 92351619 -158336235 - HAL1 LINE L1 -2358 149 2 * 1672 131 21 21 chr2 92351768 92352051 -158335803 + AluJb SINE Alu 1 283 -29 1896 113 3 24 chr2 92352051 92352365 -158335489 + AluSx SINE Alu 1 309 0 1061 154 0 6 chr2 92352398 92352567 -158335287 + AluJb SINE Alu 122 289 -23 1725 130 65 0 chr2 92352577 92352854 -158335000 + AluSq SINE Alu 1 295 -18 2027 140 0 0 chr2 92352866 92353195 -158334659 + AluSx SINE Alu 1 312 0 1223 144 13 87 chr2 92353241 92353449 -158334405 - L1MCa LINE L1 -5084 1342 1161 2167 89 7 0 chr2 92353449 92353741 -158334113 - AluSg SINE Alu -16 294 1 1223 144 13 87 chr2 92353741 92353830 -158334024 - L1MCa LINE L1 -5265 1161 1067 207 299 0 35 chr2 92353830 92353845 -158334009 + CT-rich Low_complexity Low_complexity 2 16 -69 1967 99 0 48 chr2 92353845 92354158 -158333696 - AluSc SINE Alu -11 298 1 207 299 0 35 chr2 92354158 92354229 -158333625 + CT-rich Low_complexity Low_complexity 16 85 0 2221 157 17 8 chr2 92354237 92354639 -158333215 - L1MCa LINE L1 -4851 1056 651 377 172 43 11 chr2 92354641 92354734 -158333120 - L1MCa LINE L1 -5180 727 632 523 204 0 15 chr2 92354737 92354869 -158332985 + CT-rich Low_complexity Low_complexity 3 132 0 2006 123 23 19 chr2 92354871 92355180 -158332674 - AluSx SINE Alu -2 310 1 1012 213 76 19 chr2 92355181 92355398 -158332456 - L1MCa LINE L1 -5259 648 445 2275 77 3 0 chr2 92355398 92355695 -158332159 - AluSp SINE Alu 0 313 16 1012 213 76 19 chr2 92355695 92355995 -158331859 - L1MCa LINE L1 -5462 445 3 740 297 138 52 chr2 92356001 92356842 -158331012 + L2 LINE L2 2228 3313 0 201 266 0 63 chr2 92356832 92356911 -158330943 + L2 LINE L2 2200 2273 -1041 * 367 296 50 45 chr2 92357004 92357224 -158330630 + L2 LINE L2 2422 2642 -672 1680 157 0 29 chr2 92357291 92357603 -158330251 - AluJb SINE Alu -3 309 7 2117 125 3 6 chr2 92357635 92357947 -158329907 - AluSx SINE Alu -1 311 1 490 177 71 62 chr2 92357978 92358091 -158329763 + FLAM_C SINE Alu 3 116 -27 2196 105 0 6 chr2 92358101 92358415 -158329439 - AluSx SINE Alu 0 312 1 2111 117 0 0 chr2 92358437 92358727 -158329127 - AluSc SINE Alu -19 290 1 202 196 0 0 chr2 92358727 92358763 -158329091 + A-rich Low_complexity Low_complexity 8 46 0 189 107 0 0 chr2 92358779 92358807 -158329047 + (CTATT)n Simple_repeat Simple_repeat 3 30 0 1991 132 0 0 chr2 92360085 92360373 -158327481 + AluSx SINE Alu 1 288 -24 829 147 7 29 chr2 92360634 92360770 -158327084 + FLAM_C SINE Alu 1 133 0 270 298 166 55 chr2 92360808 92361285 -158326569 - L2 LINE L2 -354 2960 2431 311 297 25 25 chr2 92361547 92361665 -158326189 - MIR SINE MIR -75 187 70 233 318 58 69 chr2 92362296 92362469 -158325385 + L2 LINE L2 3084 3254 -18 459 290 7 21 chr2 92362677 92362822 -158325032 + MIR3 SINE MIR 6 148 -60 592 261 19 97 chr2 92362832 92363100 -158324754 + MIR SINE MIR 16 262 0 486 178 44 11 chr2 92363824 92363914 -158323940 + MER20 DNA MER1_type 127 219 0 1784 120 33 27 chr2 92364116 92364416 -158323438 + AluSx SINE Alu 1 302 -10 1838 147 3 3 chr2 92365181 92365473 -158322381 - AluJb SINE Alu -20 292 1 21 57 0 0 chr2 92365586 92365621 -158322233 + AT_rich Low_complexity Low_complexity 1 35 0 771 175 8 0 chr2 92365686 92365806 -158322048 - FLAM_C SINE Alu -20 123 3 1516 137 0 9 chr2 92365835 92366068 -158321786 + AluJo SINE Alu 1 231 -81 79 21 0 0 chr2 92366091 92366184 -158321670 + AT_rich Low_complexity Low_complexity 1 93 0 594 199 29 64 chr2 92366185 92366396 -158321458 + AluYa5 SINE Alu 119 323 0 368 266 43 0 chr2 92366697 92366791 -158321063 + MIR SINE MIR 3 100 -162 189 274 0 20 chr2 92366840 92366891 -158320963 - L2 LINE L2 -64 3249 3200 * 524 256 30 8 chr2 92366867 92367000 -158320854 + MIR SINE MIR 97 232 -30 265 196 0 0 chr2 92367158 92367209 -158320645 + Charlie8 DNA MER1_type 103 153 -2264 1980 93 52 3 chr2 92367213 92367503 -158320351 + AluSx SINE Alu 1 304 -8 337 207 0 0 chr2 92367675 92367733 -158320121 - L2 LINE L2 -64 3208 3151 407 215 221 34 chr2 92367843 92367992 -158319862 + MER5A DNA MER1_type 9 185 -4 260 122 0 20 chr2 92368981 92369030 -158318824 + FLAM_A SINE Alu 86 133 0 345 234 178 9 chr2 92369031 92369138 -158318716 + MIR SINE MIR 114 238 -24 475 296 85 6 chr2 92369559 92369735 -158318119 - MIR SINE MIR -44 218 29 832 200 0 6 chr2 92369755 92369925 -158317929 - AluJb SINE Alu -10 302 134 1640 145 38 7 chr2 92369941 92370231 -158317623 + AluJb SINE Alu 2 300 -12 929 164 63 4 chr2 92370497 92370704 -158317150 + MER33 DNA MER1_type 1 205 -88 180 27 81 0 chr2 92371952 92371989 -158315865 + (CGCGG)n Simple_repeat Simple_repeat 1 40 0 37 0 0 0 chr2 92372050 92372087 -158315767 + GC_rich Low_complexity Low_complexity 1 37 0 192 40 0 0 chr2 92372100 92372125 -158315729 + (CGG)n Simple_repeat Simple_repeat 3 27 0 236 247 21 10 chr2 92372171 92372268 -158315586 + (CGG)n Simple_repeat Simple_repeat 2 99 0 2116 92 17 3 chr2 92373999 92374291 -158313563 - AluSx SINE Alu -16 296 1 23 54 0 0 chr2 92374299 92374336 -158313518 + AT_rich Low_complexity Low_complexity 1 37 0 468 0 0 0 chr2 92374648 92374700 -158313154 + (TG)n Simple_repeat Simple_repeat 2 53 0 1510 97 0 0 chr2 92375075 92375282 -158312572 + AluSg/x SINE Alu 80 286 -24 1957 108 10 19 chr2 92375297 92375604 -158312250 + AluSx SINE Alu 4 307 -5 26 23 0 23 chr2 92376138 92376160 -158311694 + AT_rich Low_complexity Low_complexity 1 22 -21 1737 116 32 18 chr2 92376160 92376444 -158311410 - AluSx SINE Alu -24 288 1 26 23 0 23 chr2 92376444 92376465 -158311389 + AT_rich Low_complexity Low_complexity 22 43 0 2014 138 0 13 chr2 92377025 92377330 -158310524 - AluSx SINE Alu -11 301 1 1659 116 8 22 chr2 92377338 92377605 -158310249 - AluSq SINE Alu -7 306 44 451 169 0 0 chr2 92377705 92377776 -158310078 - AluS SINE Alu -237 72 2 259 284 129 58 chr2 92378576 92378854 -158309000 + L2 LINE L2 228 525 -2789 934 275 26 4 chr2 92379101 92379334 -158308520 - MIR SINE MIR -6 256 19 1099 148 32 60 chr2 92379479 92379625 -158308229 + MLT1B LTR MaLR 181 321 -69 2177 120 0 0 chr2 92379625 92379933 -158307921 - AluSx SINE Alu -4 308 1 1099 148 32 60 chr2 92379933 92380002 -158307852 + MLT1B LTR MaLR 321 390 0 1734 151 7 17 chr2 92380049 92380347 -158307507 - AluJo SINE Alu -15 297 3 305 320 40 15 chr2 92380483 92380683 -158307171 + L2 LINE L2 2551 2755 -559 439 207 5 113 chr2 92380798 92380924 -158306930 + MER113 DNA MER1_type? 17 110 -411 1666 173 13 7 chr2 92380924 92381224 -158306630 - AluJo SINE Alu -10 302 1 439 207 5 113 chr2 92381224 92381319 -158306535 + MER113 DNA MER1_type? 110 214 -307 2140 107 0 3 chr2 92381348 92381647 -158306207 + AluSq SINE Alu 1 298 -15 1888 148 3 10 chr2 92381881 92382186 -158305668 + AluSx SINE Alu 2 304 -8 1963 132 0 28 chr2 92382271 92382590 -158305264 - AluJo SINE Alu -2 310 1 618 75 0 0 chr2 92382672 92382752 -158305102 + MADE1 DNA Mariner 1 80 0 1578 147 72 17 chr2 92382847 92383109 -158304745 + AluSg SINE Alu 1 290 -168 198 0 0 0 chr2 92383109 92383131 -158304723 + (TTTC)n Simple_repeat Simple_repeat 1 22 0 1578 147 72 17 chr2 92383131 92383310 -158304544 + AluSg SINE Alu 290 458 0 291 167 14 58 chr2 92383333 92383471 -158304383 + GA-rich Low_complexity Low_complexity 1 132 0 261 278 35 43 chr2 92383555 92383636 -158304218 - L2 LINE L2 0 3313 3232 2103 95 34 0 chr2 92383636 92383930 -158303924 + AluSg1 SINE Alu 1 304 -5 261 278 35 43 chr2 92383930 92383963 -158303891 - L2 LINE L2 -81 3232 3200 814 211 0 13 chr2 92384247 92384399 -158303455 + AluJb SINE Alu 137 286 -26 234 0 0 0 chr2 92384399 92384425 -158303429 + (CAAAT)n Simple_repeat Simple_repeat 2 27 0 237 253 38 124 chr2 92384834 92385020 -158302834 - MER5A DNA MER1_type 0 189 20 1676 171 0 16 chr2 92385139 92385455 -158302399 - AluJo SINE Alu 0 312 2 375 244 134 24 chr2 92385487 92385614 -158302240 - L1MC/D LINE L1 -2340 5468 5328 1946 95 67 7 chr2 92385630 92385914 -158301940 - AluSg SINE Alu -9 301 1 277 307 40 0 chr2 92385957 92386032 -158301822 + MIR SINE MIR 76 153 -109 346 198 99 50 chr2 92386041 92386105 -158301749 - MIR SINE MIR 0 262 203 444 326 65 0 chr2 92386105 92386289 -158301565 - MER91A DNA MER1_type 0 196 1 346 198 99 50 chr2 92386289 92386345 -158301509 - MIR SINE MIR -59 203 136 277 271 8 85 chr2 92386414 92386532 -158301322 + MIR SINE MIR 152 260 -2 2124 77 31 3 chr2 92386622 92386908 -158300946 - AluSg SINE Alu -16 294 1 2045 110 10 13 chr2 92387255 92387390 -158300464 + AluSx SINE Alu 1 135 -177 2147 40 50 40 chr2 92387390 92387688 -158300166 + AluY SINE Alu 1 301 -10 2045 110 10 13 chr2 92387688 92387861 -158299993 + AluSx SINE Alu 135 308 -4 419 227 93 19 chr2 92387908 92388091 -158299763 - MLT1J LTR MaLR -292 180 1 2104 98 3 19 chr2 92388267 92388583 -158299271 + AluSx SINE Alu 1 311 -1 387 231 94 51 chr2 92388849 92388966 -158298888 + L2 LINE L2 3151 3272 0 741 185 0 0 chr2 92389223 92389401 -158298453 + (CTACT)n Simple_repeat Simple_repeat 3 180 0 563 163 0 22 chr2 92441617 92441709 -158246145 - AluJ/FLAM SINE Alu -220 92 3 845 179 17 28 chr2 92441710 92441889 -158245965 + MER31A LTR ERV1 309 485 0 196 111 48 111 chr2 92442650 92442713 -158245141 - L2 LINE L2 -110 3203 3145 1858 158 3 7 chr2 92442713 92443025 -158244829 + AluJb SINE Alu 1 311 0 245 71 24 0 chr2 92443412 92443454 -158244400 - L1M4 LINE L1 -1140 5006 4964 778 238 18 36 chr2 92443471 92443661 -158244193 - AluJb SINE Alu 0 306 120 1106 191 98 12 chr2 92443696 92443952 -158243902 + MLT1D LTR MaLR 31 308 -197 26 0 0 0 chr2 92444116 92444142 -158243712 + AT_rich Low_complexity Low_complexity 1 26 0 1741 152 0 45 chr2 92444147 92444436 -158243418 - AluSx SINE Alu -30 282 7 183 100 0 0 chr2 92444475 92444505 -158243349 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 260 241 81 11 chr2 92444514 92444601 -158243253 - L2 LINE L2 -33 3280 3188 338 359 93 35 chr2 92444746 92445091 -158242763 - L2 LINE L2 -343 2971 2607 2469 81 0 10 chr2 92445098 92445405 -158242449 + AluSx SINE Alu 1 304 -8 1868 244 94 36 chr2 92445924 92446675 -158241179 + L1MC4 LINE L1 7115 7909 -133 186 167 0 0 chr2 92447643 92447679 -158240175 + (CCAA)n Simple_repeat Simple_repeat 2 37 0 2269 105 0 10 chr2 92448171 92448476 -158239378 + AluSx SINE Alu 1 302 -10 287 227 45 0 chr2 92449366 92449432 -158238422 + L2 LINE L2 3244 3312 -1 2269 94 10 3 chr2 92450397 92450695 -158237159 - AluSx SINE Alu -12 300 1 575 234 49 38 chr2 92451284 92451468 -158236386 + MER5A DNA MER1_type 1 186 -3 22 0 0 0 chr2 92451821 92451843 -158236011 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr2 92451914 92451949 -158235905 + AT_rich Low_complexity Low_complexity 1 35 0 423 38 0 0 chr2 92452446 92452499 -158235355 + (TG)n Simple_repeat Simple_repeat 2 54 0 439 258 174 0 chr2 92452602 92452734 -158235120 + MER5A DNA MER1_type 29 183 -6 2399 72 7 3 chr2 92453607 92453911 -158233943 + AluSq SINE Alu 1 305 -8 1077 137 44 105 chr2 92455845 92456177 -158231677 - LTR23 LTR ERV1 -111 334 6 3803 131 51 14 chr2 92456339 92456967 -158230887 - MER39B LTR ERV1 -2 651 1 4080 151 36 8 chr2 92457553 92458256 -158229598 + MER50 LTR ERV1 1 722 -12 3310 146 28 11 chr2 92458256 92458791 -158229063 + MER50-int LTR ERV1 7 550 -6655 1749 157 10 14 chr2 92459162 92459456 -158228398 - AluJo SINE Alu -19 293 1 682 259 192 13 chr2 92459501 92459818 -158228036 + L2 LINE L2 1648 2021 -1293 663 284 141 45 chr2 92459834 92460037 -158227817 + L2 LINE L2 2730 2912 -401 1784 163 115 20 chr2 92460037 92460393 -158227461 - MLT1B LTR MaLR 0 390 1 663 284 141 45 chr2 92460393 92460706 -158227148 + L2 LINE L2 2912 3300 -13 225 0 0 0 chr2 92460706 92460731 -158227123 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 344 253 105 43 chr2 92461257 92461419 -158226435 - L2 LINE L2 -62 3251 3080 378 222 0 0 chr2 92462202 92462214 -158225640 - L1MA10 LINE L1 -6 6328 6317 3247 200 42 25 chr2 92462214 92462950 -158224904 - L1ME2 LINE L1 -10 6154 5406 5983 179 77 25 chr2 92463056 92464310 -158223544 + MER50-int LTR ERV1 533 1850 -5355 4517 171 11 20 chr2 92464306 92465788 -158222066 + MER50-int LTR ERV1 2788 4185 -804 * 866 150 12 0 chr2 92465888 92466048 -158221806 + MER50-int LTR ERV1 3260 3421 -2525 * 8644 112 25 19 chr2 92466044 92466986 -158220868 + MER50-int LTR ERV1 4926 5878 -1327 2164 126 3 7 chr2 92466986 92467295 -158220559 - AluSx SINE Alu -2 310 3 8644 112 25 19 chr2 92467295 92467640 -158220214 + MER50-int LTR ERV1 5878 6220 -985 2449 120 11 8 chr2 92467618 92467975 -158219879 + MER50-int LTR ERV1 6840 7197 -8 * 4152 162 22 11 chr2 92467975 92468692 -158219162 + MER50 LTR ERV1 1 725 -9 392 177 42 10 chr2 92468722 92468818 -158219036 - MER20 DNA MER1_type -4 215 117 4709 135 25 15 chr2 92468931 92469714 -158218140 - L1PA13 LINE L1 -4509 2278 1533 2236 85 3 19 chr2 92469714 92470030 -158217824 - AluY SINE Alu 0 311 1 494 334 31 37 chr2 92470042 92470368 -158217486 - MER110-int LTR ERV1 -2234 2413 2090 2115 114 14 7 chr2 92471018 92471315 -158216539 - AluJb SINE Alu -13 299 1 3332 141 54 30 chr2 92472231 92472827 -158215027 - MER4D LTR ERV1 -112 791 182 815 154 22 15 chr2 92472827 92472963 -158214891 + FLAM_C SINE Alu 1 137 -6 1235 126 5 11 chr2 92472963 92473153 -158214701 - MER4D LTR ERV1 -714 189 1 231 274 16 81 chr2 92473155 92473279 -158214575 - LTR34 LTR ERV1 -294 405 290 338 264 114 25 chr2 92473447 92473648 -158214206 - HAL1 LINE L1 -241 2266 2048 307 283 57 38 chr2 92473725 92473831 -158214023 - HAL1 LINE L1 -636 1871 1764 1484 127 0 9 chr2 92473832 92474053 -158213801 - AluSq SINE Alu -4 309 91 198 0 0 0 chr2 92474072 92474094 -158213760 + (TA)n Simple_repeat Simple_repeat 2 23 0 1390 129 42 8 chr2 92474283 92474524 -158213330 + AluJo SINE Alu 56 304 -8 1198 189 108 14 chr2 92474524 92474810 -158213044 - MER31B LTR ERV1 -151 315 3 416 237 44 35 chr2 92475011 92475125 -158212729 + MIR3 SINE MIR 42 156 -52 225 245 38 0 chr2 92475171 92475224 -158212630 + MIR3 SINE MIR 140 194 -14 1197 123 0 0 chr2 92475875 92476037 -158211817 + AluSg/x SINE Alu 133 294 -18 1692 146 90 12 chr2 92476111 92476432 -158211422 + MER65A LTR ERV1 1 346 -99 189 0 0 0 chr2 92476614 92476635 -158211219 + (TC)n Simple_repeat Simple_repeat 2 22 0 378 319 17 8 chr2 92476687 92476806 -158211048 - L2 LINE L2 0 3313 3194 1219 221 67 52 chr2 92476890 92477098 -158210756 - LTR37A LTR ERV1 0 426 222 2031 136 67 28 chr2 92477098 92477459 -158210395 - THE1C LTR MaLR 0 375 1 1219 221 67 52 chr2 92477459 92477670 -158210184 - LTR37A LTR ERV1 -204 222 1 259 226 0 0 chr2 92477727 92477780 -158210074 - MER20 DNA MER1_type -1 218 166 538 171 0 0 chr2 92477794 92477876 -158209978 - FLAM_A SINE Alu -16 126 45 1951 86 43 21 chr2 92478252 92478532 -158209322 + AluSx SINE Alu 15 300 -12 191 254 0 79 chr2 92478957 92479020 -158208834 + MER5A DNA MER1_type 108 165 -24 1376 216 7 17 chr2 92479332 92479633 -158208221 - AluJo SINE Alu -14 298 1 2404 111 132 21 chr2 92479656 92479756 -158208098 - L1PA16 LINE L1 -4 6162 6075 1840 88 11 15 chr2 92479756 92480016 -158207838 - AluSc SINE Alu -12 297 39 2404 111 132 21 chr2 92480016 92480352 -158207502 - L1PA16 LINE L1 -91 6075 5667 2376 87 3 3 chr2 92480803 92481114 -158206740 + AluSq SINE Alu 1 311 -2 307 320 31 0 chr2 92481137 92481234 -158206620 - L2 LINE L2 -332 2981 2882 * 2970 224 140 151 chr2 92481214 92481861 -158205993 - L2 LINE L2 -945 2369 1717 1855 154 64 9 chr2 92481861 92482191 -158205663 - MLT1A1 LTR MaLR -17 348 1 2970 224 140 151 chr2 92482191 92483547 -158204307 - L2 LINE L2 -1597 1717 62 28 0 0 0 chr2 92483646 92483674 -158204180 + AT_rich Low_complexity Low_complexity 1 28 0 521 261 48 32 chr2 92483871 92484059 -158203795 + MIR SINE MIR 28 218 -44 2642 236 75 14 chr2 92484471 92484648 -158203206 + L1ME1 LINE L1 5430 5595 -571 1811 137 87 63 chr2 92484648 92484970 -158202884 + THE1C LTR MaLR 1 335 -40 2202 125 0 3 chr2 92484970 92485274 -158202580 - AluSx SINE Alu -9 303 1 1811 137 87 63 chr2 92485274 92485317 -158202537 + THE1C LTR MaLR 335 375 0 2642 236 75 14 chr2 92485317 92485829 -158202025 + L1ME1 LINE L1 5595 6161 -5 411 291 0 10 chr2 92486278 92486381 -158201473 + MER5A DNA MER1_type 85 186 -3 181 207 69 35 chr2 92486914 92486972 -158200882 + L2 LINE L2 332 391 -2923 228 300 90 63 chr2 92487116 92487339 -158200515 - MLT1H LTR MaLR -225 324 96 181 263 18 35 chr2 92488060 92488117 -158199737 + MIR SINE MIR 68 123 -85 275 298 50 50 chr2 92489647 92489905 -158197949 + L1MCc LINE L1 1279 1536 -4887 4865 133 27 10 chr2 92489948 92490759 -158197095 + L1MB7 LINE L1 5359 6183 -1 991 264 98 31 chr2 92490751 92491483 -158196371 + L1MCc LINE L1 1723 2496 -4445 * 6620 210 98 11 chr2 92491494 92492916 -158194938 + L1PA13 LINE L1 2 1547 -5240 613 129 21 0 chr2 92492916 92493009 -158194845 + AluS SINE Alu 2 96 -216 977 172 6 6 chr2 92493148 92493322 -158194532 - AluJb SINE Alu -5 307 134 1611 223 121 146 chr2 92493322 92494150 -158193704 - HAL1 LINE L1 -866 1641 793 246 32 0 0 chr2 92494150 92494181 -158193673 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2141 99 3 7 chr2 92494184 92494466 -158193388 - AluSx SINE Alu -31 281 1 1611 223 121 146 chr2 92494466 92494805 -158193049 - HAL1 LINE L1 -1716 791 445 250 140 53 53 chr2 92494805 92494862 -158192992 + MLT1H LTR MaLR 491 547 -2 1611 223 121 146 chr2 92494862 92495026 -158192828 - HAL1 LINE L1 -2062 445 278 3630 129 56 28 chr2 92495026 92495631 -158192223 - LTR26E LTR ERV1 0 622 1 1611 223 121 146 chr2 92495631 92495871 -158191983 - HAL1 LINE L1 -2229 278 50 4368 90 27 12 chr2 92495871 92496462 -158191392 + MER4A LTR ERV1 1 600 0 1611 223 121 146 chr2 92496462 92496510 -158191344 - HAL1 LINE L1 -2457 50 2 2307 139 67 40 chr2 92496766 92497208 -158190646 - MER39B LTR ERV1 -2 651 198 1880 116 161 75 chr2 92497208 92497580 -158190274 - MER4A LTR ERV1 0 664 261 522 98 195 0 chr2 92497580 92497662 -158190192 - MER4A LTR ERV1 -566 98 1 17303 97 47 19 chr2 92497669 92500354 -158187500 - MER4A-int LTR ERV1 -2 6596 3836 872 186 47 19 chr2 92500352 92500567 -158187287 - MER4A-int LTR ERV1 -2917 3681 3461 * 60 37 0 0 chr2 92500567 92500648 -158187206 + AT_rich Low_complexity Low_complexity 1 81 0 6252 51 0 3 chr2 92500651 92501371 -158186483 + L1PA7 LINE L1 5437 6154 0 315 178 76 19 chr2 92501373 92501530 -158186324 + (TATAA)n Simple_repeat Simple_repeat 4 169 0 252 0 0 0 chr2 92501536 92501564 -158186290 + (CA)n Simple_repeat Simple_repeat 2 29 0 1138 48 48 0 chr2 92501573 92501718 -158186136 + L1PA7 LINE L1 5682 5833 -321 30 89 0 0 chr2 92501718 92501797 -158186057 + AT_rich Low_complexity Low_complexity 1 79 0 2407 147 61 43 chr2 92501800 92502466 -158185388 - MER4A-int LTR ERV1 -3130 3468 1738 771 153 127 6 chr2 92502466 92502623 -158185231 + LTR8 LTR ERV1 1 176 -515 1322 223 45 19 chr2 92502632 92502941 -158184913 - MER4A-int LTR ERV1 -4170 2161 1845 2638 106 168 54 chr2 92503086 92503659 -158184195 - MER4A-int LTR ERV1 -5912 686 1 494 141 0 43 chr2 92503662 92503754 -158184100 - MER4A LTR ERV1 0 664 577 363 237 169 14 chr2 92504570 92504777 -158183077 - L1MC5 LINE L1 -31 7930 7692 508 269 89 39 chr2 92504831 92505052 -158182802 - L1MC5 LINE L1 -393 7415 7347 1071 182 108 15 chr2 92505052 92505255 -158182599 + MER58A DNA MER1_type 2 223 -1 508 269 89 39 chr2 92505255 92505364 -158182490 - L1MC5 LINE L1 -461 7347 7245 2325 99 3 6 chr2 92505485 92505797 -158182057 - AluY SINE Alu 0 311 1 1936 102 15 8 chr2 92506357 92506622 -158181232 + L1PA8 LINE L1 5904 6170 -2 193 266 53 117 chr2 92506823 92506917 -158180937 + MIR SINE MIR 48 135 -73 323 255 54 40 chr2 92507433 92507582 -158180272 + L2 LINE L2 2237 2387 -927 583 291 131 73 chr2 92507607 92508294 -158179560 + L2 LINE L2 2511 3241 -72 231 229 43 14 chr2 92508333 92508403 -158179451 - L2 LINE L2 -954 2360 2289 29 0 0 0 chr2 92509946 92509975 -158177879 + AT_rich Low_complexity Low_complexity 1 29 0 495 292 45 0 chr2 92511538 92511696 -158176158 - MIR3 SINE MIR -37 171 1 513 142 80 71 chr2 92511897 92512010 -158175844 - FLAM_A SINE Alu -19 114 1 2015 125 3 77 chr2 92512341 92512678 -158175176 - AluJb SINE Alu 0 312 1 5083 181 152 24 chr2 92512889 92513471 -158174383 + Charlie1a DNA MER1_type 2 508 -2253 1843 143 0 43 chr2 92513471 92513771 -158174083 + AluJo SINE Alu 1 287 -25 198 0 0 0 chr2 92513776 92513798 -158174056 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 5083 181 152 24 chr2 92513798 92514419 -158173435 + Charlie1a DNA MER1_type 511 1388 -1373 1793 123 24 0 chr2 92514419 92514671 -158173183 + AluJo SINE Alu 1 258 -54 5083 181 152 24 chr2 92514671 92514749 -158173105 + Charlie1a DNA MER1_type 1388 1455 0 261 289 94 61 chr2 92514798 92514977 -158172877 + MIR SINE MIR 2 186 -63 1980 124 23 7 chr2 92515268 92515567 -158172287 - AluSg SINE Alu -6 304 1 231 292 257 9 chr2 92516746 92516859 -158170995 - MIR3 SINE MIR -62 146 6 2540 105 30 28 chr2 92517973 92518336 -158169518 + THE1B LTR MaLR 1 364 0 415 115 49 0 chr2 92518640 92518701 -158169153 + U6 snRNA snRNA 1 64 -43 351 242 104 81 chr2 92518999 92519073 -158168781 + MIR SINE MIR 32 103 -159 1940 108 4 0 chr2 92519073 92519332 -158168522 - AluSg SINE Alu -16 294 35 351 242 104 81 chr2 92519332 92519375 -158168479 + MIR SINE MIR 103 144 -118 2005 126 20 7 chr2 92519375 92519668 -158168186 - AluSx SINE Alu -15 297 1 351 242 104 81 chr2 92519668 92519760 -158168094 + MIR SINE MIR 144 247 -15 355 316 101 39 chr2 92520339 92520696 -158167158 - L2 LINE L2 -15 3298 2920 212 250 0 0 chr2 92521210 92521254 -158166600 + MIR SINE MIR 117 160 -102 199 380 10 10 chr2 92523705 92523805 -158164049 + L2 LINE L2 2985 3084 -188 3665 162 44 129 chr2 92524843 92525828 -158162026 + MER21A LTR ERV1 25 925 -6 1072 205 5 5 chr2 92526571 92526781 -158161073 + AluJo SINE Alu 13 222 -90 464 177 80 18 chr2 92526863 92526976 -158160878 - LTR37A LTR ERV1 -12 414 295 833 153 8 0 chr2 92526976 92527107 -158160747 - MSTD LTR MaLR 0 396 265 683 201 36 22 chr2 92527124 92527263 -158160591 - MSTD LTR MaLR -287 141 1 276 215 13 128 chr2 92527330 92527479 -158160375 - LTR37A LTR ERV1 -233 193 62 279 173 0 0 chr2 92528345 92528397 -158159457 + T-rich Low_complexity Low_complexity 1 52 0 706 251 45 0 chr2 92529862 92530061 -158157793 + MIR SINE MIR 29 236 -26 2022 141 0 10 chr2 92530665 92530963 -158156891 + AluJb SINE Alu 1 295 -17 21 0 0 0 chr2 92531547 92531568 -158156286 + AT_rich Low_complexity Low_complexity 1 21 0 234 257 14 14 chr2 92531954 92532024 -158155830 - MER4D LTR ERV1 -42 861 792 2001 139 23 37 chr2 92532637 92532990 -158154864 - THE1B LTR MaLR 0 364 17 11710 89 23 1 chr2 92533009 92534552 -158153302 - THE1B-int LTR MaLR -2 1578 1 2142 119 24 43 chr2 92534552 92534923 -158152931 - THE1B LTR MaLR 0 364 1 8051 117 22 1 chr2 92534972 92537012 -158150842 + L1PA10 LINE L1 4094 6168 0 490 261 44 39 chr2 92538519 92538699 -158149155 - MER110-int LTR ERV1 -1726 2921 2741 256 180 0 0 chr2 92539073 92539123 -158148731 + L1MD1 LINE L1 6185 6234 -8 328 296 76 17 chr2 92539205 92539377 -158148477 + MIR SINE MIR 2 183 -79 180 0 0 0 chr2 92539935 92539955 -158147899 + (TG)n Simple_repeat Simple_repeat 2 21 0 445 238 86 0 chr2 92540140 92540245 -158147609 - MER81 DNA DNA 0 114 1 633 286 41 49 chr2 92540468 92540897 -158146957 - L2 LINE L2 -205 3108 2678 1437 238 93 18 chr2 92540997 92541439 -158146415 - MER39 LTR ERV1 0 707 233 229 229 21 0 chr2 92541437 92541485 -158146369 - MER39 LTR ERV1 -655 52 4 * 210 143 0 0 chr2 92542094 92542129 -158145725 + (TAGA)n Simple_repeat Simple_repeat 2 36 0 1581 136 5 0 chr2 92542942 92543162 -158144692 + AluSx SINE Alu 1 221 -91 269 321 137 23 chr2 92543305 92543436 -158144418 + L2 LINE L2 3127 3272 0 2157 113 0 0 chr2 92543865 92544139 -158143715 - AluSx SINE Alu -38 274 1 2140 96 11 0 chr2 92544761 92545061 -158142793 + AluSp SINE Alu 8 310 0 2319 141 85 4 chr2 92545262 92545660 -158142194 - MSTB LTR MaLR 0 402 1 419 257 214 0 chr2 92546140 92546280 -158141574 + MER5A DNA MER1_type 14 183 -6 640 199 122 6 chr2 92546289 92546445 -158141409 - MER5B DNA MER1_type -3 175 2 2098 145 0 3 chr2 92546800 92547104 -158140750 + AluSx SINE Alu 1 303 -9 1897 147 54 30 chr2 92548475 92548843 -158139011 + MLT2D LTR ERVL 1 377 -37 2192 109 7 0 chr2 92549127 92549440 -158138414 + AluSq SINE Alu 1 315 0 265 247 26 26 chr2 92550244 92550321 -158137533 - L2 LINE L2 -2 3311 3235 193 81 81 0 chr2 92551200 92551262 -158136592 + (TATAA)n Simple_repeat Simple_repeat 4 70 0 412 258 62 82 chr2 92551980 92552174 -158135680 + MLT1K LTR MaLR 2 191 -397 337 263 0 88 chr2 92552288 92552425 -158135429 + LTR67 LTR ERVL 433 557 0 324 282 12 0 chr2 92552925 92553010 -158134844 + L1MC4a LINE L1 5785 5870 -1938 558 231 11 44 chr2 92553019 92553201 -158134653 - L1MC5 LINE L1 -35 7926 7751 1609 199 3 32 chr2 92553257 92553568 -158134286 - AluJb SINE Alu -10 302 1 276 171 219 32 chr2 92553575 92553698 -158134156 - L1MC5 LINE L1 -208 7753 7608 1541 183 40 6 chr2 92553736 92554213 -158133641 - MER68 LTR ERV1 0 562 1 1742 233 98 65 chr2 92554217 92554787 -158133067 - L1MC5 LINE L1 -414 7547 6939 2001 135 0 22 chr2 92554787 92555099 -158132755 + AluJb SINE Alu 2 306 -6 1742 233 98 65 chr2 92555099 92555362 -158132492 - L1MC5 LINE L1 -1022 6939 6686 1925 145 3 3 chr2 92555481 92555763 -158132091 + AluSx SINE Alu 1 282 -30 662 238 17 44 chr2 92556120 92556301 -158131553 + MER5B DNA MER1_type 1 176 -2 1266 118 6 0 chr2 92556465 92556643 -158131211 - AluSg/x SINE Alu 0 312 134 432 51 0 0 chr2 92556651 92556710 -158131144 + (GTTTG)n Simple_repeat Simple_repeat 1 59 0 2282 71 3 24 chr2 92556710 92556996 -158130858 - AluY SINE Alu -29 282 1 1778 173 0 4 chr2 92557007 92557284 -158130570 - AluJb SINE Alu -25 287 12 2142 113 34 0 chr2 92558056 92558349 -158129505 - AluSx SINE Alu -9 303 1 833 144 0 0 chr2 92558459 92558577 -158129277 + FLAM_C SINE Alu 1 118 -15 3296 145 65 20 chr2 92558713 92558827 -158129027 + L1MC1 LINE L1 5707 5814 -519 1714 190 0 7 chr2 92558827 92559137 -158128717 + AluJo SINE Alu 1 308 -4 3296 145 65 20 chr2 92559137 92559622 -158128232 + L1MC1 LINE L1 5814 6333 0 1904 142 3 17 chr2 92559654 92559956 -158127898 + AluJo SINE Alu 1 298 -14 2266 119 0 3 chr2 92560019 92560330 -158127524 - AluSx SINE Alu -2 310 1 368 234 23 102 chr2 92560369 92560501 -158127353 - L1MEc LINE L1 -3906 2323 2251 1772 160 0 27 chr2 92560501 92560794 -158127060 + AluJb SINE Alu 1 285 -27 368 234 23 102 chr2 92560794 92560950 -158126904 - L1MEc LINE L1 -3978 2251 2084 716 163 0 54 chr2 92560952 92561099 -158126755 - FLAM_C SINE Alu -2 141 3 1727 172 0 11 chr2 92561263 92561548 -158126306 - AluSg SINE Alu -10 300 19 412 83 0 42 chr2 92561657 92561729 -158126125 - L1PA13 LINE L1 -1 6162 6094 17585 157 81 8 chr2 92561731 92562825 -158125029 - L1P4 LINE L1 -572 5591 4578 2306 92 3 0 chr2 92562825 92563117 -158124737 + AluY SINE Alu 1 293 -18 17585 157 81 8 chr2 92563117 92565129 -158122725 - L1P4 LINE L1 -1585 4578 2713 2311 116 0 3 chr2 92565129 92565440 -158122414 - AluSx SINE Alu -2 310 1 17585 157 81 8 chr2 92565440 92565476 -158122378 - L1P4 LINE L1 -3450 2713 2681 2017 152 3 0 chr2 92565476 92565772 -158122082 - AluSx SINE Alu -15 297 1 17585 157 81 8 chr2 92565772 92566254 -158121600 - L1P4 LINE L1 -3482 2681 1690 929 82 67 0 chr2 92566354 92566489 -158121365 - MER30 DNA MER1_type -86 144 1 1938 152 14 3 chr2 92566751 92567048 -158120806 - AluSx SINE Alu -12 300 1 205 200 0 0 chr2 92567083 92567118 -158120736 + (TG)n Simple_repeat Simple_repeat 2 36 0 461 301 19 32 chr2 92567183 92567339 -158120515 - MLT1F LTR MaLR -375 167 14 2146 91 80 43 chr2 92567400 92567750 -158120104 - L1PA13 LINE L1 0 6163 5801 925 203 66 52 chr2 92567904 92568269 -158119585 - L1MC5 LINE L1 -36 7925 7556 213 317 217 31 chr2 92568303 92568464 -158119390 - MIR3 SINE MIR -6 202 12 278 253 88 11 chr2 92568813 92568904 -158118950 - L1MC4a LINE L1 -1902 5906 5809 614 268 45 5 chr2 92569813 92570011 -158117843 - MIR SINE MIR -12 250 45 586 215 99 41 chr2 92571038 92571210 -158116644 - MER106A DNA MER1_type -54 182 1 245 283 66 9 chr2 92571342 92571448 -158116406 + MIR SINE MIR 103 214 -48 191 216 39 0 chr2 92575758 92575809 -158112045 - MIR SINE MIR -124 138 86 527 232 18 30 chr2 92576222 92576390 -158111464 + MIR SINE MIR 34 199 -63 1633 183 32 0 chr2 92576577 92576856 -158110998 - AluJb SINE Alu -24 288 1 17205 149 39 14 chr2 92578017 92581909 -158105945 - L1PB1 LINE L1 -5 6862 2711 1914 108 0 8 chr2 92581909 92582168 -158105686 - AluSq SINE Alu -17 296 40 17205 149 39 14 chr2 92582168 92584949 -158102905 - L1PB1 LINE L1 -4156 2711 1 273 286 69 33 chr2 92585142 92585474 -158102380 - L1MC4a LINE L1 -1877 5931 5506 1069 221 84 36 chr2 92585561 92585652 -158102202 - L1ME3A LINE L1 -327 5843 5758 1668 149 3 70 chr2 92585652 92585981 -158101873 - AluJo SINE Alu -5 307 1 1069 221 84 36 chr2 92585981 92586492 -158101362 - L1ME3A LINE L1 -412 5758 5207 461 250 99 38 chr2 92586542 92586754 -158101100 - L2 LINE L2 -205 3067 2843 22 70 0 0 chr2 92587741 92587784 -158100070 + AT_rich Low_complexity Low_complexity 1 43 0 221 258 118 21 chr2 92589614 92589707 -158098147 - MIR SINE MIR -64 144 43 245 247 275 6 chr2 92589981 92590159 -158097695 - MIR SINE MIR -18 244 19 2041 195 155 9 chr2 92590560 92591094 -158096760 - MER90 LTR ERV1 0 614 3 987 206 119 0 chr2 92592169 92592455 -158095399 - MER33 DNA MER1_type 0 324 5 360 288 155 27 chr2 92592763 92592982 -158094872 + L2 LINE L2 3009 3255 -17 365 243 66 33 chr2 92594676 92594857 -158092997 + LTR33A LTR ERVL 330 516 -7 304 319 168 0 chr2 92594892 92595005 -158092849 + L2 LINE L2 3137 3268 -4 568 197 77 17 chr2 92595015 92595132 -158092722 - AluJo SINE Alu -176 136 13 1521 137 0 5 chr2 92595242 92595461 -158092393 + AluSq SINE Alu 88 305 -8 399 211 0 92 chr2 92595461 92595483 -158092371 + L1MDa LINE L1 2425 2447 -4093 2224 132 42 17 chr2 92595483 92595838 -158092016 + THE1B LTR MaLR 1 364 0 12035 80 11 3 chr2 92595838 92597404 -158090450 + THE1B-int LTR MaLR 1 1580 0 2302 117 36 20 chr2 92597404 92597762 -158090092 + THE1B LTR MaLR 1 364 0 399 211 0 92 chr2 92597762 92597846 -158090008 + L1MDa LINE L1 2444 2523 -4017 631 220 14 0 chr2 92597846 92597987 -158089867 - L1ME LINE L1 -5920 150 8 378 149 15 0 chr2 92598242 92598309 -158089545 - L1 LINE L1 -1413 4733 4666 541 319 62 4 chr2 92598496 92598753 -158089101 + L2 LINE L2 2336 2607 -707 1897 230 19 34 chr2 92598906 92599520 -158088334 - L1M4 LINE L1 -3113 3735 3131 6928 50 10 1 chr2 92599530 92600989 -158086865 - L1PA7 LINE L1 -2 6152 4697 310 267 150 71 chr2 92601203 92601469 -158086385 + L1M2 LINE L1 1050 1336 -5513 344 316 99 91 chr2 92601787 92602919 -158084935 - L1M4 LINE L1 -5447 1402 552 314 254 22 39 chr2 92603273 92603454 -158084400 + (GGGTG)n Simple_repeat Simple_repeat 3 180 0 * 389 151 0 132 chr2 92603321 92603526 -158084328 + G-rich Low_complexity Low_complexity 3 180 0 563 72 0 36 chr2 92604274 92604357 -158083497 - MADE1 DNA Mariner 0 80 1 406 314 104 33 chr2 92604862 92605161 -158082693 + L1ME LINE L1 5495 5814 -307 21 0 0 31 chr2 92605452 92605467 -158082387 + AT_rich Low_complexity Low_complexity 1 15 -16 2217 116 7 3 chr2 92605467 92605777 -158082077 - AluSx SINE Alu -1 311 1 21 0 0 31 chr2 92605777 92605793 -158082061 + AT_rich Low_complexity Low_complexity 15 31 0 287 299 0 35 chr2 92606583 92606727 -158081127 - MER104 DNA Tc2 -13 167 29 504 270 44 13 chr2 92606865 92607024 -158080830 - MIR SINE MIR 0 262 99 216 92 0 77 chr2 92607789 92607854 -158080000 + (TTAAA)n Simple_repeat Simple_repeat 4 63 0 53 63 0 0 chr2 92607860 92607955 -158079899 + AT_rich Low_complexity Low_complexity 1 95 0 2118 117 0 0 chr2 92608508 92608799 -158079055 + AluY SINE Alu 1 291 -20 2376 50 0 0 chr2 92609084 92609396 -158078458 - AluY SINE Alu 0 312 1 25 31 0 0 chr2 92611593 92611625 -158076229 + AT_rich Low_complexity Low_complexity 1 32 0 27 49 0 0 chr2 92612430 92612471 -158075383 + AT_rich Low_complexity Low_complexity 1 41 0 455 45 15 0 chr2 92612471 92612537 -158075317 - L1PA4 LINE L1 -3 6152 6086 208 240 0 0 chr2 92613991 92614041 -158073813 + (TG)n Simple_repeat Simple_repeat 1 50 0 6518 80 52 5 chr2 92614211 92615172 -158072682 - L1PA7 LINE L1 -2 6152 5182 6731 95 14 7 chr2 92615173 92616213 -158071641 + L1PA7 LINE L1 4123 5170 -976 297 51 0 0 chr2 92617070 92617109 -158070745 + (TG)n Simple_repeat Simple_repeat 2 40 0 315 71 0 0 chr2 92618298 92618340 -158069514 + (TA)n Simple_repeat Simple_repeat 2 43 0 299 182 0 0 chr2 92619970 92620025 -158067829 - MER5A DNA MER1_type -109 80 26 366 147 176 0 chr2 92621824 92621892 -158065962 - MER5A DNA MER1_type -83 106 27 394 114 171 0 chr2 92623692 92623762 -158064092 - MER5A DNA MER1_type -82 107 26 21 0 0 0 chr2 92625293 92625314 -158062540 + AT_rich Low_complexity Low_complexity 1 21 0 2310 99 3 0 chr2 92625651 92625954 -158061900 - AluSp SINE Alu -9 304 1 4581 173 21 2 chr2 92626263 92627187 -158060667 - L1MA3 LINE L1 0 6305 5365 2268 115 0 0 chr2 92627668 92627963 -158059891 - AluSg SINE Alu -15 295 1 2471 40 0 7 chr2 92628994 92629290 -158058564 - AluY SINE Alu -17 294 1 21 36 0 0 chr2 92629325 92629353 -158058501 + AT_rich Low_complexity Low_complexity 1 28 0 10811 31 2 4 chr2 92629990 92631969 -158055885 + L1PA4 LINE L1 4021 5995 -160 729 114 48 163 chr2 92632410 92632582 -158055272 - MER39B LTR ERV1 -452 201 60 2204 125 0 6 chr2 92632582 92632894 -158054960 - AluSx SINE Alu -1 311 2 729 114 48 163 chr2 92632894 92632948 -158054906 - MER39B LTR ERV1 -593 60 1 2124 179 30 36 chr2 92633578 92634048 -158053806 - MLT1C LTR MaLR 0 467 1 1306 94 133 0 chr2 92634563 92634766 -158053088 - MER30 DNA MER1_type 0 230 1 1935 152 14 3 chr2 92635028 92635325 -158052529 - AluSx SINE Alu -12 300 1 237 211 0 0 chr2 92635360 92635412 -158052442 + (TG)n Simple_repeat Simple_repeat 1 52 0 417 298 19 32 chr2 92635465 92635623 -158052231 - MLT1F LTR MaLR -375 167 12 2083 87 81 43 chr2 92635688 92636033 -158051821 - L1PA13 LINE L1 -5 6158 5801 788 199 68 60 chr2 92636200 92636552 -158051302 - L1MC5 LINE L1 -51 7910 7556 270 317 217 31 chr2 92636586 92636747 -158051107 - MIR3 SINE MIR -6 202 12 269 239 0 14 chr2 92637116 92637187 -158050667 - L1MC/D LINE L1 -1930 5878 5809 18217 19 1 0 chr2 92637999 92641028 -158046826 + L1HS LINE L1 3125 6155 0 243 0 0 0 chr2 92641028 92641055 -158046799 + (A)n Simple_repeat Simple_repeat 1 27 0 353 352 46 5 chr2 92641153 92641349 -158046505 - MIR SINE MIR -14 248 45 450 284 31 8 chr2 92641885 92642012 -158045842 - MIR SINE MIR -115 147 18 399 257 44 53 chr2 92642107 92642383 -158045471 - L1M3d LINE L1 -4733 1317 950 809 173 149 5 chr2 92642961 92643169 -158044685 + L1MA4 LINE L1 6057 6294 -6 1198 281 41 10 chr2 92643285 92643677 -158044177 + MLT1E2 LTR MaLR 198 601 -25 25 0 0 0 chr2 92644301 92644326 -158043528 + AT_rich Low_complexity Low_complexity 1 25 0 809 191 0 0 chr2 92644542 92644673 -158043181 + FLAM_A SINE Alu 1 131 -2 656 231 2 13 chr2 92645120 92645295 -158042559 + L1MB8 LINE L1 5977 6157 -15 245 276 31 56 chr2 92645452 92645648 -158042206 + L1M4 LINE L1 3545 3735 -2411 22 35 0 0 chr2 92645654 92645683 -158042171 + AT_rich Low_complexity Low_complexity 1 29 0 1391 188 6 35 chr2 92645827 92646141 -158041713 - L1MB3 LINE L1 -50 6133 5829 824 153 0 0 chr2 92646801 92646925 -158040929 + AluSq/x SINE Alu 1 124 -189 501 187 23 18 chr2 92647043 92647214 -158040640 - L1M4 LINE L1 -2879 3267 3096 1631 188 51 3 chr2 92647215 92647507 -158040347 - AluJo SINE Alu -6 306 1 24 53 0 0 chr2 92647507 92647545 -158040309 + AT_rich Low_complexity Low_complexity 1 38 0 1334 159 5 5 chr2 92647556 92647763 -158040091 - AluJo SINE Alu -33 279 73 1345 206 131 0 chr2 92647763 92648137 -158039717 - L1M4 LINE L1 -3060 3086 2664 621 243 111 34 chr2 92648165 92648400 -158039454 + L1ME LINE L1 25 277 -5793 282 298 11 11 chr2 92649715 92649809 -158038045 + MIR SINE MIR 30 123 -85 1830 137 30 0 chr2 92649910 92650181 -158037673 - AluSx SINE Alu -33 279 1 1500 145 0 18 chr2 92650635 92650863 -158036991 - AluSx SINE Alu -88 224 1 907 230 9 0 chr2 92650865 92651078 -158036776 - MER66-int LTR ERV1 -5492 1184 970 2709 162 78 22 chr2 92651181 92651760 -158036094 - MER4D LTR ERV1 -258 614 4 22 0 0 0 chr2 92651812 92651834 -158036020 + AT_rich Low_complexity Low_complexity 1 22 0 303 304 92 19 chr2 92651987 92652194 -158035660 - LTR16C LTR ERVL -84 407 186 467 208 23 31 chr2 92652194 92652324 -158035530 - MLT1A1 LTR MaLR -2 363 235 321 243 14 0 chr2 92652363 92652437 -158035417 + Tigger2 DNA MER2_type 2644 2718 0 572 226 73 20 chr2 92652805 92653009 -158034845 + LTR48B LTR ERV1 426 640 -4 26 0 0 0 chr2 92653725 92653751 -158034103 + AT_rich Low_complexity Low_complexity 1 26 0 1637 215 50 18 chr2 92655076 92655409 -158032445 - MER65C LTR ERV1 -5 456 104 2932 128 26 30 chr2 92655409 92655908 -158031946 - LOR1a LTR ERV1 0 497 1 1637 215 50 18 chr2 92655908 92656016 -158031838 - MER65C LTR ERV1 -357 104 1 22 0 0 0 chr2 92656392 92656414 -158031440 + AT_rich Low_complexity Low_complexity 1 22 0 26 98 0 0 chr2 92656997 92657079 -158030775 + AT_rich Low_complexity Low_complexity 1 82 0 4915 167 16 2 chr2 92658075 92658967 -158028887 + MER70A-int LTR ERVL 1970 2873 -2150 1047 167 26 21 chr2 92658962 92659315 -158028539 + MER70A-int LTR ERVL 4629 5009 -14 * 1964 238 21 21 chr2 92659323 92659793 -158028061 + MER70A LTR ERVL 1 470 -2 502 266 31 13 chr2 92659806 92660032 -158027822 + L1MB3 LINE L1 5950 6179 -4 261 0 0 0 chr2 92660143 92660172 -158027682 + (TG)n Simple_repeat Simple_repeat 2 30 0 500 218 0 48 chr2 92660174 92660298 -158027556 - FLAM_C SINE Alu -15 118 1 1345 285 49 15 chr2 92660966 92661514 -158026340 + L1ME1 LINE L1 5519 6085 -81 240 254 56 7 chr2 92662043 92662210 -158025644 - L1 LINE L1 -2382 3764 3586 1025 215 75 100 chr2 92662299 92662750 -158025104 + MER66B LTR ERV1 1 440 -46 1080 246 57 17 chr2 92662994 92663506 -158024348 + MER66B-int LTR ERV1 195 748 -5928 5145 36 9 2 chr2 92663610 92664242 -158023612 + L1PA4 LINE L1 5517 6153 -2 27 29 0 0 chr2 92664744 92664778 -158023076 + AT_rich Low_complexity Low_complexity 1 34 0 298 299 54 76 chr2 92666723 92666907 -158020947 + L2 LINE L2 2563 2742 -572 539 235 7 13 chr2 92667023 92667172 -158020682 - L1MA10 LINE L1 -11 6323 6176 1887 228 27 18 chr2 92667193 92667978 -158019876 - L1MC/D LINE L1 -745 5401 4797 233 188 146 0 chr2 92668045 92668093 -158019761 - Tigger5 DNA MER2_type -2268 55 1 1007 223 84 28 chr2 92668093 92668111 -158019743 - L1MC/D LINE L1 -1349 4797 4781 1748 136 100 6 chr2 92668111 92668441 -158019413 + MER46B DNA MER2_type 1 236 0 1007 223 84 28 chr2 92668441 92668816 -158019038 - L1MC/D LINE L1 -1365 4781 4382 436 270 31 0 chr2 92668896 92669059 -158018795 - L1MC/D LINE L1 -1753 4393 4226 551 231 19 0 chr2 92669105 92669253 -158018601 - MER58B DNA MER1_type -33 308 37 1352 267 34 15 chr2 92669299 92669767 -158018087 - L1MC/D LINE L1 -1939 4207 3731 1385 209 41 6 chr2 92669774 92670094 -158017760 - L1MC1 LINE L1 -9 6324 5994 21 82 0 0 chr2 92670573 92670622 -158017232 + AT_rich Low_complexity Low_complexity 1 49 0 310 318 65 12 chr2 92671205 92671375 -158016479 - L2 LINE L2 -410 2904 2726 36 0 0 0 chr2 92672021 92672057 -158015797 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr2 92672083 92672116 -158015738 + AT_rich Low_complexity Low_complexity 1 33 0 755 224 27 11 chr2 92673103 92673286 -158014568 - MER58A DNA MER1_type 0 224 39 253 211 0 0 chr2 92673353 92673405 -158014449 - L1M1 LINE L1 -523 5779 5728 1990 144 38 3 chr2 92673993 92674339 -158013515 - MER46B DNA MER2_type -2 234 2 1986 117 40 3 chr2 92675726 92676024 -158011830 - AluY SINE Alu -2 309 1 513 271 46 21 chr2 92676535 92676775 -158011079 + LTR16A LTR ERVL 199 444 -6 216 119 24 24 chr2 92677372 92677414 -158010440 + (CAGGG)n Simple_repeat Simple_repeat 4 45 0 268 194 30 0 chr2 92678926 92678993 -158008861 + MLT1K LTR MaLR 516 584 -4 206 214 0 0 chr2 92680117 92680159 -158007695 + G-rich Low_complexity Low_complexity 5 46 0 447 264 80 50 chr2 92681673 92681874 -158005980 - L2 LINE L2 0 3313 3107 2330 103 19 49 chr2 92682420 92682789 -158005065 + THE1B LTR MaLR 1 358 -6 224 265 29 29 chr2 92683061 92683129 -158004725 - L2 LINE L2 -560 2754 2687 2014 124 73 14 chr2 92683617 92683971 -158003883 + THE1C LTR MaLR 1 375 0 9400 146 18 32 chr2 92683973 92685574 -158002280 + THE1C-int LTR MaLR 3 1580 0 1732 144 78 39 chr2 92685574 92685935 -158001919 + THE1C LTR MaLR 1 375 0 2737 166 36 19 chr2 92685994 92686470 -158001384 + Tigger7 DNA MER2_type 38 521 -212 378 228 11 11 chr2 92686469 92686561 -158001293 + Tigger7 DNA MER2_type 2496 2587 0 * 373 278 75 12 chr2 92686639 92686812 -158001042 + L1MC5 LINE L1 7718 7901 -60 22 0 0 0 chr2 92686928 92686950 -158000904 + AT_rich Low_complexity Low_complexity 1 22 0 7510 44 0 1 chr2 92687683 92688765 -157999089 + L1PA5 LINE L1 5073 6153 -1 24 0 0 0 chr2 92688765 92688789 -157999065 + AT_rich Low_complexity Low_complexity 1 24 0 564 300 45 48 chr2 92688808 92689098 -157998756 + Charlie8 DNA MER1_type 1 289 -2128 433 328 109 19 chr2 92689158 92689478 -157998376 - L1M4 LINE L1 -743 5403 5055 257 291 98 53 chr2 92689490 92689868 -157997986 - L1MEc LINE L1 -4640 1756 1362 * 344 313 28 7 chr2 92689860 92690004 -157997850 - L1MEc LINE L1 -5292 913 767 1703 172 7 26 chr2 92690067 92690370 -157997484 - AluJo SINE Alu -15 297 1 190 324 15 0 chr2 92691260 92691328 -157996526 - MIR SINE MIR -35 227 159 632 238 100 59 chr2 92692306 92692596 -157995258 + L1MC5 LINE L1 6747 7048 -913 187 290 177 8 chr2 92692684 92692808 -157995046 - MER5B DNA MER1_type -27 151 7 208 266 122 65 chr2 92692873 92693012 -157994842 + MIR SINE MIR 47 193 -69 529 293 111 58 chr2 92693394 92693773 -157994081 + L1MC4a LINE L1 5576 5974 -1834 2882 142 32 12 chr2 92694728 92695229 -157992625 - L1MB3 LINE L1 0 6183 5673 1764 153 42 0 chr2 92695254 92695541 -157992313 + AluJb SINE Alu 1 299 -13 1275 191 36 24 chr2 92695711 92695962 -157991892 + MER82 DNA MER2_type 400 653 0 304 218 46 11 chr2 92696008 92696095 -157991759 - L1MC/D LINE L1 -2035 5773 5684 402 297 13 70 chr2 92696634 92696712 -157991142 - MER112 DNA MER1_type -16 244 163 1467 197 51 14 chr2 92696712 92697006 -157990848 + AluJo SINE Alu 3 307 -5 402 297 13 70 chr2 92697006 92697156 -157990698 - MER112 DNA MER1_type -97 163 29 213 39 0 0 chr2 92698253 92698279 -157989575 + (TA)n Simple_repeat Simple_repeat 1 26 0 199 89 22 22 chr2 92698413 92698458 -157989396 - L2 LINE L2 -294 2978 2934 479 213 0 37 chr2 92698843 92698970 -157988884 - MLT1H LTR MaLR -379 170 11 492 252 8 8 chr2 92699170 92699297 -157988557 + LTR67 LTR ERVL 428 554 -3 391 282 121 61 chr2 92699338 92699717 -157988137 + L1MC/D LINE L1 5334 5735 -2073 2325 103 3 0 chr2 92699808 92700108 -157987746 + AluSg SINE Alu 1 301 -9 540 239 92 26 chr2 92700205 92700582 -157987272 - LTR33A LTR ERVL -8 515 64 21 0 0 0 chr2 92700729 92700750 -157987104 + AT_rich Low_complexity Low_complexity 1 21 0 29 78 0 0 chr2 92703064 92703128 -157984726 + AT_rich Low_complexity Low_complexity 1 64 0 258 32 0 0 chr2 92704593 92704624 -157983230 + (TAAAAA)n Simple_repeat Simple_repeat 2 32 0 216 0 0 0 chr2 92705045 92705069 -157982785 + (A)n Simple_repeat Simple_repeat 1 24 0 344 279 101 0 chr2 92705888 92706017 -157981837 - MIR3 SINE MIR -9 199 58 452 274 58 32 chr2 92706888 92707078 -157980776 - MIR SINE MIR -48 214 20 257 280 90 0 chr2 92707694 92707794 -157980060 + MIR3 SINE MIR 100 208 0 187 321 122 8 chr2 92707957 92708088 -157979766 + MIR SINE MIR 111 256 -6 267 351 67 6 chr2 92709676 92709841 -157978013 + MIR3 SINE MIR 4 178 -30 204 192 39 0 chr2 92710869 92710930 -157976924 + MIR SINE MIR 90 145 -63 192 221 44 88 chr2 92712934 92713047 -157974807 + L2 LINE L2 3165 3272 0 204 404 7 0 chr2 92713871 92714012 -157973842 - MIR SINE MIR -17 245 104 226 339 51 0 chr2 92714268 92714386 -157973468 + L2 LINE L2 3148 3271 -1 202 273 0 0 chr2 92714481 92714536 -157973318 + (TGGA)n Simple_repeat Simple_repeat 2 56 0 327 301 43 54 chr2 92715631 92715817 -157972037 + MIR SINE MIR 8 191 -71 272 377 25 0 chr2 92716200 92716322 -157971532 + MIR SINE MIR 28 152 -110 221 293 0 27 chr2 92716593 92716668 -157971186 + GA-rich Low_complexity Low_complexity 1 73 0 2538 234 22 88 chr2 92717003 92717968 -157969886 + L2 LINE L2 1462 2362 -952 548 244 48 0 chr2 92717968 92718136 -157969718 + L1M4 LINE L1 4747 4922 -1224 503 202 10 0 chr2 92718193 92718292 -157969562 + L1M4 LINE L1 4906 5005 -1141 881 276 144 46 chr2 92718297 92718597 -157969257 + L2 LINE L2 2371 2640 -673 1652 116 94 25 chr2 92718597 92718874 -157968980 - AluJb SINE Alu -16 296 1 881 276 144 46 chr2 92718874 92719367 -157968487 + L2 LINE L2 2640 3313 0 2291 113 3 0 chr2 92719374 92719674 -157968180 + AluSq SINE Alu 1 301 -12 21 36 0 0 chr2 92719945 92719973 -157967881 + AT_rich Low_complexity Low_complexity 1 28 0 200 214 179 0 chr2 92720211 92720267 -157967587 + MIR SINE MIR 81 146 -116 995 209 64 14 chr2 92720488 92720794 -157967060 - MER33 DNA MER1_type -12 312 1 492 234 70 6 chr2 92720911 92721069 -157966785 - MIR SINE MIR 0 262 95 230 287 6 75 chr2 92721575 92721749 -157966105 + CT-rich Low_complexity Low_complexity 4 165 0 291 329 0 0 chr2 92722417 92722499 -157965355 + T-rich Low_complexity Low_complexity 2 83 0 380 303 19 19 chr2 92722559 92722721 -157965133 - MIR SINE MIR -41 221 60 1351 246 26 9 chr2 92722982 92723323 -157964531 - MLT1C LTR MaLR 0 467 121 2921 192 38 100 chr2 92723341 92724113 -157963741 - L1MD2 LINE L1 -17 6225 5502 475 190 15 102 chr2 92724117 92724254 -157963600 - MLT1C LTR MaLR -335 132 8 1437 253 63 20 chr2 92725101 92725605 -157962249 - L1ME3A LINE L1 -14 6156 5589 323 294 80 27 chr2 92725736 92725923 -157961931 - L1ME LINE L1 -314 5807 5611 21 0 0 0 chr2 92731214 92731235 -157956619 + AT_rich Low_complexity Low_complexity 1 21 0 234 322 153 70 chr2 92731757 92732019 -157955835 + L2 LINE L2 2825 3135 -137 2643 42 0 0 chr2 92732019 92732328 -157955526 - AluY SINE Alu -2 309 1 234 322 153 70 chr2 92732328 92732478 -157955376 + L2 LINE L2 3135 3271 -1 689 212 125 16 chr2 92732838 92733022 -157954832 - MIR SINE MIR -11 251 48 285 309 109 6 chr2 92733153 92733318 -157954536 + L1MC/D LINE L1 5668 5849 -1959 322 57 38 0 chr2 92734370 92734423 -157953431 + (GA)n Simple_repeat Simple_repeat 1 55 0 3944 197 22 48 chr2 92735550 92736542 -157951312 - LTR5 LTR ERVK -1 968 3 33 43 0 0 chr2 92737264 92737311 -157950543 + AT_rich Low_complexity Low_complexity 1 47 0 614 146 0 0 chr2 92737452 92737555 -157950299 + LTR37B LTR ERV1 197 299 -169 314 211 0 22 chr2 92737567 92737657 -157950197 + (TATG)n Simple_repeat Simple_repeat 3 90 0 1651 191 19 9 chr2 92737693 92738008 -157949846 + Tigger7 DNA MER2_type 1 318 -415 734 98 136 0 chr2 92738005 92738137 -157949717 + Tigger7 DNA MER2_type 2399 2548 -39 * 285 98 0 0 chr2 92738470 92738511 -157949343 + (GA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 92738537 92738566 -157949288 + AT_rich Low_complexity Low_complexity 1 29 0 2278 91 0 3 chr2 92738891 92739187 -157948667 - AluSg SINE Alu -15 295 1 852 74 57 20 chr2 92739353 92739652 -157948202 + CT-rich Low_complexity Low_complexity 1 310 0 430 199 13 12 chr2 92739664 92739834 -157948020 + CT-rich Low_complexity Low_complexity 1 170 0 1854 194 24 13 chr2 92740224 92740605 -157947249 + L1MDa LINE L1 3 387 -6153 882 215 38 38 chr2 92740608 92740845 -157947009 + L1MDa LINE L1 962 1198 -5342 1241 233 32 6 chr2 92740885 92741224 -157946630 + L1MDa LINE L1 3034 3381 -3159 1121 176 93 40 chr2 92741238 92741416 -157946438 + L1MD2 LINE L1 5644 5844 -515 1729 134 6 68 chr2 92741416 92741737 -157946117 + AluJo SINE Alu 1 301 -11 1121 176 93 40 chr2 92741737 92741836 -157946018 + L1MD2 LINE L1 5844 5936 -423 525 247 62 65 chr2 92741860 92742216 -157945638 - L1ME LINE L1 -534 5628 5274 245 221 180 49 chr2 92742429 92742551 -157945303 + MLT1J LTR MaLR 277 414 -97 378 0 0 0 chr2 92742852 92742894 -157944960 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 380 264 153 51 chr2 92742927 92743280 -157944574 + L1MC5 LINE L1 7547 7935 -26 24 0 0 0 chr2 92743482 92743506 -157944348 + AT_rich Low_complexity Low_complexity 1 24 0 222 230 11 35 chr2 92744219 92744306 -157943548 + A-rich Low_complexity Low_complexity 4 88 0 714 217 65 0 chr2 92744328 92744558 -157943296 + L1ME1 LINE L1 5122 5366 -780 2762 202 51 13 chr2 92744580 92745208 -157942646 + L1ME1 LINE L1 5510 6161 -5 5356 162 6 19 chr2 92745505 92745883 -157941971 - L1PB4 LINE L1 0 6156 5775 216 0 0 0 chr2 92745883 92745907 -157941947 + (CA)n Simple_repeat Simple_repeat 2 25 0 5356 162 6 19 chr2 92745907 92746330 -157941524 - L1PB4 LINE L1 -381 5775 5348 2495 109 22 8 chr2 92746330 92746689 -157941165 - THE1B LTR MaLR 0 364 1 5356 162 6 19 chr2 92746689 92747152 -157940702 - L1PB4 LINE L1 -808 5348 4900 643 313 24 14 chr2 92747529 92747740 -157940114 + MIR SINE MIR 50 262 0 314 262 10 68 chr2 92747813 92747916 -157939938 + L2 LINE L2 2672 2768 -546 455 260 45 45 chr2 92747948 92748102 -157939752 - MER5B DNA MER1_type -2 176 23 807 138 25 25 chr2 92748522 92748682 -157939172 - MER96B DNA MER1_type? -3 414 255 23 0 0 0 chr2 92748734 92748757 -157939097 + AT_rich Low_complexity Low_complexity 1 23 0 2116 120 3 3 chr2 92748762 92749054 -157938800 - AluSx SINE Alu -18 294 3 443 157 0 0 chr2 92749260 92749330 -157938524 + AluJb SINE Alu 165 234 -78 285 106 21 0 chr2 92749435 92749482 -157938372 - Alu SINE Alu -28 272 225 1196 228 163 34 chr2 92750156 92750664 -157937190 + L2 LINE L2 1998 2571 -743 332 260 59 102 chr2 92751185 92751279 -157936575 - LTR67 LTR ERVL 0 557 460 3133 119 59 41 chr2 92751279 92751868 -157935986 + MER4A LTR ERV1 1 600 0 332 260 59 102 chr2 92751868 92752027 -157935827 - LTR67 LTR ERVL -97 460 315 24 0 0 0 chr2 92752196 92752220 -157935634 + AT_rich Low_complexity Low_complexity 1 24 0 480 250 89 67 chr2 92752456 92752636 -157935218 + MIR3 SINE MIR 2 185 -23 454 218 103 19 chr2 92752842 92752998 -157934856 - MLT1I LTR MaLR -9 400 232 6893 149 15 9 chr2 92755962 92758283 -157929571 - L1MA2 LINE L1 -16 6288 3949 4774 44 3 21 chr2 92758674 92759289 -157928565 - L1PA7 LINE L1 -4 6150 5547 2296 82 0 6 chr2 92759289 92759604 -157928250 + L1P LINE L1 4779 5091 -1055 195 42 0 0 chr2 92759732 92759756 -157928098 + (TAA)n Simple_repeat Simple_repeat 2 25 0 2057 137 0 0 chr2 92759764 92760049 -157927805 - AluSx SINE Alu -27 285 1 406 253 22 0 chr2 92760310 92760401 -157927453 + FLAM_A SINE Alu 40 132 -1 24 0 0 0 chr2 92760613 92760637 -157927217 + AT_rich Low_complexity Low_complexity 1 24 0 617 201 8 45 chr2 92761114 92761248 -157926606 + MER44D DNA MER2_type 4 402 -207 2010 195 3 0 chr2 92762046 92762389 -157925465 + ERVL LTR ERVL 4130 4473 -1291 1304 137 9 9 chr2 92762389 92762616 -157925238 - Cheshire DNA MER1_type -1560 860 634 381 153 0 35 chr2 92762620 92762705 -157925149 - L1M4 LINE L1 -2196 3950 3869 * 2775 261 26 19 chr2 92762684 92763583 -157924271 - L1MCa LINE L1 -1953 4473 3569 1091 190 55 52 chr2 92763556 92764049 -157923805 - L1MCa LINE L1 -3883 2724 2178 * 23 0 0 0 chr2 92764268 92764291 -157923563 + AT_rich Low_complexity Low_complexity 1 23 0 1975 145 56 37 chr2 92764305 92764713 -157923141 - L1MA4 LINE L1 -7 6293 5878 232 233 17 0 chr2 92764714 92764774 -157923080 - L1MCa LINE L1 -4244 2182 2122 1943 189 3 13 chr2 92764858 92765238 -157922616 + MER45R DNA AcHobo 472 847 -734 361 224 40 0 chr2 92765302 92765378 -157922476 + MER45 DNA AcHobo 1503 1581 0 23 0 0 0 chr2 92765514 92765537 -157922317 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 92765749 92765772 -157922082 + AT_rich Low_complexity Low_complexity 1 23 0 296 119 17 0 chr2 92769049 92769108 -157918746 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 294 29 0 0 chr2 92769135 92769170 -157918684 + (TG)n Simple_repeat Simple_repeat 2 36 0 604 283 58 49 chr2 92769257 92769565 -157918289 - L1ME LINE L1 -541 5629 5319 200 143 29 0 chr2 92769644 92769679 -157918175 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 1280 211 46 60 chr2 92769681 92770032 -157917822 + MLT1A1 LTR MaLR 9 354 -11 436 158 105 0 chr2 92770133 92770266 -157917588 - L1 LINE L1 -1757 4389 4243 5832 97 29 0 chr2 92770278 92771320 -157916534 - L1PA10 LINE L1 -11 6157 5087 393 332 66 16 chr2 92771973 92772229 -157915625 + L1MC4a LINE L1 5589 5857 -1951 2924 248 48 13 chr2 92773294 92774403 -157913451 - L1MB8 LINE L1 -6 6172 5015 2070 121 0 3 chr2 92774404 92774710 -157913144 + L1PA12 LINE L1 4038 4342 -1804 6528 87 10 0 chr2 92774746 92776585 -157911269 + L1PA12 LINE L1 4326 6167 -1 492 274 18 6 chr2 92776671 92776835 -157911019 - L1MB8 LINE L1 -1239 4907 4742 2264 185 24 16 chr2 92776859 92777285 -157910569 + Tigger2a DNA MER2_type 6 434 0 1257 221 63 8 chr2 92777289 92777656 -157910198 - L1MB8 LINE L1 -1408 4738 4352 1857 221 79 10 chr2 92777669 92778085 -157909769 - MER82 DNA MER2_type -1 652 208 264 59 0 0 chr2 92778085 92778119 -157909735 + (TG)n Simple_repeat Simple_repeat 2 35 0 10487 127 30 11 chr2 92778127 92779818 -157908036 + Tigger1 DNA MER2_type 6 1768 -650 437 155 0 0 chr2 92779818 92779889 -157907965 + L1PA8A LINE L1 6061 6131 0 10487 127 30 11 chr2 92779889 92780553 -157907301 + Tigger1 DNA MER2_type 1768 2417 -1 541 204 53 0 chr2 92780606 92780738 -157907116 - MER82 DNA MER2_type -482 171 33 1608 255 34 36 chr2 92780767 92781468 -157906386 - L1MB8 LINE L1 -1806 4340 3641 879 214 61 10 chr2 92781652 92781956 -157905898 - MER33 DNA MER1_type -14 310 1 549 234 70 6 chr2 92782073 92782231 -157905623 - MIR SINE MIR 0 262 95 230 287 6 75 chr2 92782737 92782911 -157904943 + CT-rich Low_complexity Low_complexity 4 165 0 291 329 0 0 chr2 92783579 92783661 -157904193 + T-rich Low_complexity Low_complexity 2 83 0 442 304 26 31 chr2 92783721 92783915 -157903939 - MIR SINE MIR -41 221 29 1194 246 26 9 chr2 92784144 92784485 -157903369 - MLT1C LTR MaLR 0 467 121 2634 193 38 100 chr2 92784503 92785275 -157902579 - L1MD2 LINE L1 -17 6225 5502 425 190 15 102 chr2 92785279 92785416 -157902438 - MLT1C LTR MaLR -335 132 8 1272 255 63 20 chr2 92786263 92786767 -157901087 - L1ME3A LINE L1 -14 6156 5589 361 294 80 27 chr2 92786898 92787085 -157900769 - L1ME LINE L1 -314 5807 5611 21 0 0 0 chr2 92792377 92792398 -157895456 + AT_rich Low_complexity Low_complexity 1 21 0 243 322 153 70 chr2 92792920 92793182 -157894672 + L2 LINE L2 2825 3135 -137 2641 42 0 0 chr2 92793182 92793491 -157894363 - AluY SINE Alu -2 309 1 243 322 153 70 chr2 92793491 92793641 -157894213 + L2 LINE L2 3135 3271 -1 693 212 125 16 chr2 92794001 92794185 -157893669 - MIR SINE MIR -11 251 48 241 309 109 6 chr2 92794316 92794481 -157893373 + L1MC/D LINE L1 5668 5849 -1959 322 57 38 0 chr2 92795533 92795586 -157892268 + (GA)n Simple_repeat Simple_repeat 1 55 0 4101 196 22 48 chr2 92796713 92797705 -157890149 - LTR5 LTR ERVK -1 968 3 33 43 0 0 chr2 92798427 92798474 -157889380 + AT_rich Low_complexity Low_complexity 1 47 0 583 146 0 0 chr2 92798615 92798718 -157889136 + LTR37B LTR ERV1 197 299 -169 314 211 0 22 chr2 92798730 92798820 -157889034 + (TATG)n Simple_repeat Simple_repeat 3 90 0 1523 194 19 9 chr2 92798856 92799171 -157888683 + Tigger7 DNA MER2_type 1 318 -2169 693 98 136 0 chr2 92799168 92799300 -157888554 + Tigger7 DNA MER2_type 2399 2548 -39 * 285 98 0 0 chr2 92799633 92799674 -157888180 + (GA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 92799700 92799729 -157888125 + AT_rich Low_complexity Low_complexity 1 29 0 2290 91 0 3 chr2 92800054 92800350 -157887504 - AluSg SINE Alu -15 295 1 928 82 16 38 chr2 92800517 92800648 -157887206 + (TTTC)n Simple_repeat Simple_repeat 1 308 0 928 82 16 38 chr2 92800648 92800832 -157887022 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1730 194 24 13 chr2 92801378 92801759 -157886095 + L1MDa LINE L1 3 387 -6153 813 219 38 38 chr2 92801762 92801999 -157885855 + L1MDa LINE L1 962 1198 -5342 1124 236 32 6 chr2 92802039 92802378 -157885476 + L1MDa LINE L1 3034 3381 -3159 1017 181 94 40 chr2 92802394 92802570 -157885284 + L1MD2 LINE L1 5646 5844 -515 1779 131 6 68 chr2 92802570 92802891 -157884963 + AluJo SINE Alu 1 301 -11 1017 181 94 40 chr2 92802891 92802990 -157884864 + L1MD2 LINE L1 5844 5936 -423 415 253 36 82 chr2 92803049 92803358 -157884496 - L1MC/D LINE L1 -637 5527 5289 270 0 0 0 chr2 92804006 92804036 -157883818 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 396 261 153 51 chr2 92804069 92804422 -157883432 + L1MC5 LINE L1 7547 7935 -26 24 0 0 0 chr2 92804624 92804648 -157883206 + AT_rich Low_complexity Low_complexity 1 24 0 222 230 11 35 chr2 92805361 92805448 -157882406 + A-rich Low_complexity Low_complexity 4 88 0 658 217 65 0 chr2 92805470 92805700 -157882154 + L1ME1 LINE L1 5122 5366 -780 2566 202 51 13 chr2 92805722 92806350 -157881504 + L1ME1 LINE L1 5510 6161 -5 5112 160 6 18 chr2 92806647 92807025 -157880829 - L1PB4 LINE L1 0 6156 5775 234 0 0 0 chr2 92807025 92807051 -157880803 + (CA)n Simple_repeat Simple_repeat 2 27 0 5112 160 6 18 chr2 92807051 92807473 -157880381 - L1PB4 LINE L1 -381 5775 5350 2520 106 22 8 chr2 92807473 92807832 -157880022 - THE1B LTR MaLR 0 364 1 5112 160 6 18 chr2 92807832 92808295 -157879559 - L1PB4 LINE L1 -806 5350 4900 623 318 24 14 chr2 92808672 92808883 -157878971 + MIR SINE MIR 50 262 0 312 262 10 68 chr2 92808956 92809059 -157878795 + L2 LINE L2 2672 2768 -546 465 240 58 58 chr2 92809091 92809245 -157878609 - MER5B DNA MER1_type -2 176 23 757 138 25 25 chr2 92809665 92809825 -157878029 - MER96B DNA MER1_type? -3 414 255 2150 123 3 22 chr2 92809881 92810199 -157877655 - AluSx SINE Alu 0 312 1 450 157 0 0 chr2 92810403 92810473 -157877381 + AluJb SINE Alu 165 234 -78 267 106 21 0 chr2 92810578 92810625 -157877229 - Alu SINE Alu -28 272 225 1219 228 163 34 chr2 92811299 92811807 -157876047 + L2 LINE L2 1998 2571 -743 267 258 20 93 chr2 92812328 92812422 -157875432 - LTR67 LTR ERVL 0 557 477 3116 119 59 41 chr2 92812422 92813011 -157874843 + MER4A LTR ERV1 1 600 0 267 258 20 93 chr2 92813011 92813067 -157874787 - LTR67 LTR ERVL -80 477 418 24 0 0 0 chr2 92813339 92813363 -157874491 + AT_rich Low_complexity Low_complexity 1 24 0 482 250 89 67 chr2 92813599 92813779 -157874075 + MIR3 SINE MIR 2 185 -23 404 211 105 20 chr2 92813989 92814141 -157873713 - MLT1I LTR MaLR -13 396 232 6540 150 15 9 chr2 92817103 92819424 -157868430 - L1MA2 LINE L1 -16 6288 3949 4781 44 3 21 chr2 92819814 92820429 -157867425 - L1PA7 LINE L1 -4 6150 5547 2190 82 0 6 chr2 92820429 92820744 -157867110 + L1P LINE L1 4779 5091 -1055 195 42 0 0 chr2 92820871 92820895 -157866959 + (TAA)n Simple_repeat Simple_repeat 2 25 0 2076 137 0 0 chr2 92820903 92821188 -157866666 - AluSx SINE Alu -27 285 1 381 253 22 0 chr2 92821449 92821540 -157866314 + FLAM_A SINE Alu 40 132 -1 24 0 0 0 chr2 92821752 92821776 -157866078 + AT_rich Low_complexity Low_complexity 1 24 0 573 201 8 45 chr2 92822253 92822387 -157865467 + MER44D DNA MER2_type 4 402 -207 1888 195 3 0 chr2 92823185 92823528 -157864326 + ERVL LTR ERVL 4130 4473 -1291 1251 132 9 9 chr2 92823528 92823755 -157864099 - Cheshire DNA MER1_type -1560 860 634 360 147 0 27 chr2 92823759 92823834 -157864020 - L1M4 LINE L1 -2196 3950 3878 * 2549 261 26 19 chr2 92823823 92824722 -157863132 - L1MCa LINE L1 -1953 4473 3569 1008 191 55 52 chr2 92824695 92825188 -157862666 - L1MCa LINE L1 -3883 2724 2178 * 23 0 0 0 chr2 92825407 92825430 -157862424 + AT_rich Low_complexity Low_complexity 1 23 0 1947 145 56 37 chr2 92825444 92825852 -157862002 - L1MA4 LINE L1 -7 6293 5878 1831 189 3 13 chr2 92825997 92826377 -157861477 + MER45R DNA AcHobo 472 847 -734 336 224 40 0 chr2 92826441 92826517 -157861337 + MER45 DNA AcHobo 1503 1581 0 23 0 0 0 chr2 92826653 92826676 -157861178 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 92826888 92826911 -157860943 + AT_rich Low_complexity Low_complexity 1 23 0 296 119 17 0 chr2 92830188 92830247 -157857607 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 294 29 0 0 chr2 92830274 92830309 -157857545 + (TG)n Simple_repeat Simple_repeat 2 36 0 523 299 69 11 chr2 92830430 92830704 -157857150 - L1ME LINE L1 -562 5608 5319 200 143 29 0 chr2 92830783 92830818 -157857036 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 1166 211 46 60 chr2 92830820 92831171 -157856683 + MLT1A1 LTR MaLR 9 354 -11 407 158 105 0 chr2 92831272 92831405 -157856449 - L1 LINE L1 -1757 4389 4243 5810 97 29 0 chr2 92831417 92832459 -157855395 - L1PA10 LINE L1 -11 6157 5087 393 332 66 16 chr2 92833112 92833368 -157854486 + L1MC4a LINE L1 5589 5857 -1951 2671 249 48 13 chr2 92834433 92835542 -157852312 - L1MB8 LINE L1 -6 6172 5015 1962 121 0 3 chr2 92835543 92835849 -157852005 + L1PA12 LINE L1 4038 4342 -1804 6506 87 10 0 chr2 92835885 92837724 -157850130 + L1PA12 LINE L1 4326 6167 -1 446 274 18 6 chr2 92837810 92837974 -157849880 - L1MB8 LINE L1 -1239 4907 4742 2126 185 24 16 chr2 92837998 92838424 -157849430 + Tigger2a DNA MER2_type 6 434 0 1201 221 39 3 chr2 92838428 92838763 -157849091 - L1MB8 LINE L1 -1408 4738 4392 1723 221 79 10 chr2 92838808 92839224 -157848630 - MER82 DNA MER2_type -1 652 208 264 59 0 0 chr2 92839224 92839258 -157848596 + (TG)n Simple_repeat Simple_repeat 2 35 0 13552 134 33 9 chr2 92839266 92840957 -157846897 + Tigger1 DNA MER2_type 6 1770 -648 437 155 0 0 chr2 92840957 92841028 -157846826 + L1PA8A LINE L1 6061 6131 0 13552 134 33 9 chr2 92841028 92841692 -157846162 + Tigger1 DNA MER2_type 1770 2417 -1 541 204 53 0 chr2 92841745 92841877 -157845977 - MER82 DNA MER2_type -482 171 33 2709 264 68 24 chr2 92841906 92843133 -157844721 - L1MB8 LINE L1 -1806 4340 3061 27 0 0 0 chr2 92843189 92843216 -157844638 + AT_rich Low_complexity Low_complexity 1 27 0 1496 239 85 43 chr2 92843455 92844065 -157843789 + MLT1E1 LTR MaLR 17 652 -2 2076 127 0 0 chr2 92844391 92844675 -157843179 + AluSg SINE Alu 22 305 -5 195 129 0 0 chr2 92845086 92845117 -157842737 + (CA)n Simple_repeat Simple_repeat 2 32 0 441 253 13 6 chr2 92846665 92846822 -157841032 + L1M2a LINE L1 1858 2031 -5060 21 0 0 0 chr2 92847028 92847049 -157840805 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr2 92848112 92848135 -157839719 + (A)n Simple_repeat Simple_repeat 1 23 0 302 272 11 22 chr2 92848829 92848921 -157838933 + L1MD2 LINE L1 5106 5196 -950 1769 238 107 35 chr2 92848921 92849636 -157838218 + L1MD2 LINE L1 5592 6359 0 341 209 76 0 chr2 92849983 92850088 -157837766 + (CCTG)n Simple_repeat Simple_repeat 2 114 0 6759 79 14 68 chr2 92850090 92851192 -157836662 + SVA Other Other 3 1044 -342 2317 192 170 21 chr2 92851494 92852166 -157835688 + L1MCa LINE L1 476 1247 -5179 1324 72 5 10 chr2 92852173 92852366 -157835488 - MER75B DNA T2_type 0 243 52 333 215 15 0 chr2 92852952 92853017 -157834837 - MER75B DNA T2_type -177 66 1 4057 271 32 14 chr2 92853068 92855821 -157832033 + L1MCa LINE L1 1307 4140 -2286 2283 174 68 32 chr2 92855854 92856384 -157831470 + L1MC1 LINE L1 5785 6333 0 5157 67 13 10 chr2 92856395 92857070 -157830784 + SVA Other Other 710 1386 0 27 49 0 0 chr2 92857172 92857213 -157830641 + AT_rich Low_complexity Low_complexity 1 41 0 315 153 61 0 chr2 92857708 92857806 -157830048 + (TA)n Simple_repeat Simple_repeat 2 105 0 333 0 0 0 chr2 92857806 92857843 -157830011 + (TC)n Simple_repeat Simple_repeat 2 38 0 297 0 0 0 chr2 92857842 92857875 -157829979 + (TA)n Simple_repeat Simple_repeat 1 33 0 * 1344 227 63 44 chr2 92857964 92858489 -157829365 - LTR55 LTR ERV -13 535 1 570 145 17 8 chr2 92858623 92858740 -157829114 + L1MA10 LINE L1 6216 6333 -1 21 36 0 0 chr2 92859550 92859578 -157828276 + AT_rich Low_complexity Low_complexity 1 28 0 216 67 0 0 chr2 92860130 92860160 -157827694 + (TAAAA)n Simple_repeat Simple_repeat 4 33 0 455 333 0 6 chr2 92863299 92863470 -157824384 + ERVL LTR ERVL 3005 3174 -2590 369 222 95 0 chr2 92863470 92863596 -157824258 + L1M4 LINE L1 2592 2729 -3417 1746 188 16 0 chr2 92863596 92863905 -157823949 - MER41D LTR ERV1 0 557 244 2201 135 0 0 chr2 92864780 92865083 -157822771 - AluSx SINE Alu -9 303 1 370 302 23 8 chr2 92865398 92865527 -157822327 + L1M4 LINE L1 3253 3383 -2763 1302 209 122 11 chr2 92865537 92865906 -157821948 - MER66A LTR ERV1 -40 438 29 1395 178 40 14 chr2 92865922 92866198 -157821656 - MER66A-int LTR ERV1 -4 6672 6390 1102 217 73 42 chr2 92866187 92866472 -157821382 - LTR48B-int LTR ERV1 -1579 6177 5902 * 1928 159 0 19 chr2 92866472 92866780 -157821074 - AluSx SINE Alu -10 302 1 1102 217 73 42 chr2 92866780 92866879 -157820975 - LTR48B-int LTR ERV1 -1854 5902 4604 368 227 36 45 chr2 92866903 92867013 -157820841 - MER4D LTR ERV1 -712 160 52 1028 167 10 93 chr2 92867013 92867092 -157820762 - LTR48B-int LTR ERV1 -2225 4451 4367 1698 133 0 0 chr2 92867092 92867333 -157820521 + AluY SINE Alu 50 290 -21 1028 167 10 93 chr2 92867333 92867656 -157820198 - LTR48B-int LTR ERV1 -2309 4367 2421 1999 160 7 0 chr2 92867679 92867985 -157819869 - AluSx SINE Alu -4 308 1 300 247 0 0 chr2 92867990 92868063 -157819791 - LTR48B-int LTR ERV1 -2550 4126 4054 * 4330 218 63 42 chr2 92868058 92868205 -157819649 - LTR48B-int LTR ERV1 -5376 1300 1157 1814 174 30 0 chr2 92868205 92868503 -157819351 - AluSx SINE Alu -5 307 1 4330 218 63 42 chr2 92868503 92869601 -157818253 - LTR48B-int LTR ERV1 -5519 1157 30 866 188 29 0 chr2 92869647 92869817 -157818037 - MER70A-int LTR ERVL -4848 175 1 1777 216 114 5 chr2 92869821 92870243 -157817611 - MER70A LTR ERVL -4 468 1 2326 216 49 24 chr2 92870251 92871033 -157816821 - L1MB3 LINE L1 -262 5921 5120 23 0 0 0 chr2 92872011 92872034 -157815820 + AT_rich Low_complexity Low_complexity 1 23 0 4092 98 40 3 chr2 92873918 92874500 -157813354 + LTR14B LTR ERVK 4 606 -2 22 0 0 0 chr2 92874756 92874778 -157813076 + AT_rich Low_complexity Low_complexity 1 22 0 215 190 63 0 chr2 92874778 92874857 -157812997 + (CATATA)n Simple_repeat Simple_repeat 5 88 0 189 132 0 0 chr2 92874859 92874897 -157812957 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 24 91 0 0 chr2 92875140 92875206 -157812648 + AT_rich Low_complexity Low_complexity 1 66 0 22 0 0 0 chr2 92875813 92875835 -157812019 + AT_rich Low_complexity Low_complexity 1 22 0 1682 209 49 22 chr2 92876212 92876320 -157811534 + MER65C LTR ERV1 1 105 -356 2980 115 35 12 chr2 92876320 92876806 -157811048 + LOR1a LTR ERV1 1 497 0 1682 209 49 22 chr2 92876806 92877142 -157810712 + MER65C LTR ERV1 105 457 -4 235 314 20 0 chr2 92878302 92878404 -157809450 + L1MC4 LINE L1 7788 7891 -151 22 0 0 0 chr2 92878470 92878492 -157809362 + AT_rich Low_complexity Low_complexity 1 22 0 526 250 106 52 chr2 92879210 92879725 -157808129 - LTR48B LTR ERV1 -5 782 1 1155 183 34 4 chr2 92879782 92880044 -157807810 - Tigger2a DNA MER2_type 0 444 175 318 171 171 0 chr2 92880045 92880121 -157807733 - Tigger2a DNA MER2_type -345 89 1 725 212 52 128 chr2 92880296 92880678 -157807176 + MLT1A1 LTR MaLR 1 353 -12 4912 144 46 40 chr2 92881101 92881398 -157806456 + MER4D LTR ERV1 1 295 -577 2382 93 3 6 chr2 92881398 92881710 -157806144 - AluY SINE Alu 0 311 1 4912 144 46 40 chr2 92881710 92882279 -157805575 + MER4D LTR ERV1 295 872 0 916 198 89 30 chr2 92882504 92882555 -157805299 + MLT1D LTR MaLR 12 59 -446 4072 141 22 22 chr2 92882555 92882699 -157805155 + LTR9B LTR ERV1 1 144 -500 2127 59 30 4 chr2 92882699 92882970 -157804884 - AluY SINE Alu -14 297 20 4072 141 22 22 chr2 92882970 92883036 -157804818 + LTR9B LTR ERV1 144 209 -435 2328 101 0 3 chr2 92883036 92883344 -157804510 - AluSc SINE Alu -2 307 1 4072 141 22 22 chr2 92883344 92883776 -157804078 + LTR9B LTR ERV1 208 644 0 916 198 89 30 chr2 92883776 92884171 -157803683 + MLT1D LTR MaLR 59 505 0 253 310 0 0 chr2 92887084 92887155 -157800699 - MLT1C LTR MaLR 0 467 397 252 354 10 0 chr2 92887193 92887289 -157800565 - MLT1B LTR MaLR -89 276 180 461 256 74 17 chr2 92887367 92887554 -157800300 - MLT1B LTR MaLR -189 185 1 488 239 30 30 chr2 92888341 92888475 -157799379 + MER3 DNA MER1_type 20 153 -56 630 254 8 0 chr2 92890264 92890394 -157797460 - MER70A LTR ERVL -341 131 1 2535 208 47 43 chr2 92890402 92891214 -157796640 - L1MB3 LINE L1 -262 5921 5104 228 300 36 9 chr2 92891534 92891644 -157796210 - LTR67 LTR ERVL -54 503 391 293 345 31 21 chr2 92893044 92893238 -157794616 - HERVL LTR ERVL -1303 4351 4156 33 90 0 0 chr2 92893907 92893996 -157793858 + AT_rich Low_complexity Low_complexity 1 89 0 21 71 0 0 chr2 92894091 92894133 -157793721 + AT_rich Low_complexity Low_complexity 1 42 0 1814 211 52 25 chr2 92895164 92895272 -157792582 + MER65C LTR ERV1 1 105 -356 2880 134 42 44 chr2 92895272 92895770 -157792084 + LOR1a LTR ERV1 1 497 0 1814 211 52 25 chr2 92895770 92896106 -157791748 + MER65C LTR ERV1 105 457 -4 25 0 0 0 chr2 92897422 92897447 -157790407 + AT_rich Low_complexity Low_complexity 1 25 0 996 180 29 0 chr2 92897639 92897845 -157790009 - Tigger2a DNA MER2_type -57 387 176 295 214 86 0 chr2 92897857 92897927 -157789927 - Tigger2a DNA MER2_type -358 76 1 614 187 40 76 chr2 92898102 92898300 -157789554 + MLT1A1 LTR MaLR 1 191 -174 5068 151 40 20 chr2 92898688 92899540 -157788314 + MER4D LTR ERV1 4 872 0 535 233 101 31 chr2 92902040 92902199 -157785655 - MLT1B LTR MaLR -220 170 1 270 236 21 76 chr2 92904030 92904174 -157783680 - L1ME3 LINE L1 -139 6023 5888 1008 275 69 34 chr2 92904186 92905068 -157782786 - L1M4 LINE L1 -4598 2540 1481 1411 174 32 52 chr2 92905257 92905567 -157782287 - AluJo SINE Alu -8 304 1 1568 186 34 3 chr2 92905635 92905930 -157781924 + MER47A DNA MER2_type 6 309 -57 239 304 38 44 chr2 92906508 92906666 -157781188 - L1M4 LINE L1 -6606 253 97 376 314 33 45 chr2 92906760 92907053 -157780801 + L1MC4a LINE L1 6230 6520 -1288 2355 89 0 19 chr2 92907053 92907368 -157780486 + AluY SINE Alu 1 309 -2 376 314 33 45 chr2 92907368 92907405 -157780449 + L1MC4a LINE L1 6520 6556 -1252 1441 268 30 24 chr2 92907457 92907960 -157779894 - L1MC4a LINE L1 -2 7806 7301 2451 74 0 0 chr2 92909634 92909933 -157777921 - AluY SINE Alu -12 299 1 432 320 30 20 chr2 92910067 92910264 -157777590 + MIR SINE MIR 64 262 0 2021 150 0 0 chr2 92911551 92911844 -157776010 - AluSx SINE Alu -19 293 1 1821 108 42 4 chr2 92912176 92912436 -157775418 + AluY SINE Alu 38 307 -4 307 295 18 0 chr2 92912437 92912549 -157775305 + L1M4 LINE L1 3270 3383 -2763 1483 208 154 13 chr2 92912559 92912943 -157774911 - MER66A LTR ERV1 -40 438 1 1582 161 39 14 chr2 92912943 92913223 -157774631 - MER66A-int LTR ERV1 0 6676 6390 1007 241 58 24 chr2 92913212 92913507 -157774347 - LTR48B-int LTR ERV1 -1735 4941 4637 * 1603 157 8 19 chr2 92913507 92913798 -157774056 - AluSx SINE Alu 0 315 28 393 239 36 18 chr2 92913798 92913945 -157773909 - LTR48B-int LTR ERV1 -3010 3588 2421 2053 141 0 43 chr2 92913980 92914306 -157773548 - AluSx SINE Alu 0 312 1 3697 223 55 17 chr2 92914314 92915398 -157772456 - LTR48B-int LTR ERV1 -5498 1178 30 977 182 29 0 chr2 92915444 92915614 -157772240 - MER70A-int LTR ERVL -4848 175 1 1712 249 110 0 chr2 92915619 92916037 -157771817 - MER70A LTR ERVL -8 464 1 2408 219 56 25 chr2 92916045 92916838 -157771016 - L1MB3 LINE L1 -262 5921 5099 248 258 40 13 chr2 92920084 92920235 -157767619 + (TA)n Simple_repeat Simple_repeat 2 156 0 243 202 9 138 chr2 92920437 92920546 -157767308 - MLT1H LTR MaLR -35 514 420 1528 204 52 63 chr2 92921315 92921422 -157766432 + MER65C LTR ERV1 3 110 -351 3052 147 38 0 chr2 92921422 92921899 -157765955 + LOR1a LTR ERV1 1 495 -2 1528 204 52 63 chr2 92921899 92922251 -157765603 + MER65C LTR ERV1 110 457 -4 26 0 0 0 chr2 92923576 92923602 -157764252 + AT_rich Low_complexity Low_complexity 1 26 0 642 239 130 68 chr2 92924306 92924712 -157763142 - LTR48B LTR ERV1 -5 782 184 1419 221 108 38 chr2 92924886 92924950 -157762904 + MLT1D LTR MaLR 3 61 -444 4223 144 16 9 chr2 92924950 92925588 -157762266 + LTR9B LTR ERV1 3 644 0 1419 221 108 38 chr2 92925588 92925993 -157761861 + MLT1D LTR MaLR 61 505 0 225 230 0 27 chr2 92927385 92927459 -157760395 + (TA)n Simple_repeat Simple_repeat 1 72 0 479 225 0 0 chr2 92928322 92928411 -157759443 + FLAM_C SINE Alu 34 122 -21 279 0 0 0 chr2 92928411 92928442 -157759412 + (CA)n Simple_repeat Simple_repeat 2 32 0 652 265 26 13 chr2 92928560 92928790 -157759064 - L1MB3 LINE L1 -1 6182 5950 2349 213 19 27 chr2 92928803 92929277 -157758577 - MER70A LTR ERVL -2 470 1 1777 170 88 42 chr2 92929281 92929470 -157758384 - MER70A-int LTR ERVL -1 5022 4843 3952 186 50 63 chr2 92929470 92930437 -157757417 - LTR13 LTR ERVK 0 954 1 1777 170 88 42 chr2 92930437 92930624 -157757230 - MER70A-int LTR ERVL -180 4843 4629 * 4183 215 23 11 chr2 92930619 92931763 -157756091 - MER70A-int LTR ERVL -2150 2873 1621 5067 204 51 9 chr2 92931763 92932906 -157754948 - MER70A-int LTR ERVL -3832 1191 1 1657 246 109 0 chr2 92932910 92933332 -157754522 - MER70A LTR ERVL -4 468 1 2014 225 70 26 chr2 92933339 92934124 -157753730 - L1MB3 LINE L1 -261 5922 5099 2020 104 3 20 chr2 92936073 92936372 -157751482 + AluSc SINE Alu 1 294 -15 201 271 12 12 chr2 92937731 92937816 -157750038 + (TA)n Simple_repeat Simple_repeat 2 86 0 30 83 0 0 chr2 92937832 92937904 -157749950 + AT_rich Low_complexity Low_complexity 1 72 0 1399 226 54 20 chr2 92938900 92939007 -157748847 + MER65C LTR ERV1 1 103 -358 2914 141 29 0 chr2 92939007 92939490 -157748364 + LOR1a LTR ERV1 1 497 0 1399 226 54 20 chr2 92939490 92939824 -157748030 + MER65C LTR ERV1 103 457 -4 3564 135 16 7 chr2 92941539 92942146 -157745708 - L1PA15 LINE L1 -277 5888 5276 252 0 0 0 chr2 92942249 92942277 -157745577 + (TG)n Simple_repeat Simple_repeat 1 28 0 285 320 27 7 chr2 92943499 92943649 -157744205 + L1 LINE L1 3595 3747 -2399 25 0 0 0 chr2 92943827 92943852 -157744002 + AT_rich Low_complexity Low_complexity 1 25 0 241 346 71 16 chr2 92943932 92944059 -157743795 - MIR SINE MIR -93 169 36 1482 283 44 10 chr2 92944168 92944761 -157743093 - L1ME1 LINE L1 -46 6120 5508 395 286 0 23 chr2 92945433 92945566 -157742288 + FLAM_C SINE Alu 1 130 -3 1023 186 16 20 chr2 92945689 92945936 -157741918 - L1MB3 LINE L1 -1 6182 5937 1842 237 24 24 chr2 92945936 92946404 -157741450 - MER70A LTR ERVL -2 470 3 13436 200 27 7 chr2 92946410 92949195 -157738659 - MER70A-int LTR ERVL 0 5023 2182 405 0 0 0 chr2 92951291 92951336 -157736518 + (TTTTA)n Simple_repeat Simple_repeat 5 49 0 314 298 105 35 chr2 92951337 92951595 -157736259 - L1ME3 LINE L1 -9 6153 5878 560 313 42 15 chr2 92951605 92952062 -157735792 - L1MEc LINE L1 -4602 2223 1755 1093 184 0 5 chr2 92952093 92952299 -157735555 - L1PA16 LINE L1 0 6166 5962 1207 120 14 23 chr2 92952303 92952519 -157735335 + L1PA16 LINE L1 5758 5971 -195 432 312 47 8 chr2 92952523 92952882 -157734972 - L1MEc LINE L1 -4976 1566 1194 314 269 83 56 chr2 92954246 92954462 -157733392 - L1ME3 LINE L1 -29 6133 5912 342 293 50 8 chr2 92954653 92954906 -157732948 - L1ME LINE L1 -5094 976 734 1362 204 20 23 chr2 92955096 92955400 -157732454 - AluJb SINE Alu -9 303 1 1409 212 3 3 chr2 92955465 92955772 -157732082 + MER47A DNA MER2_type 3 309 -57 452 309 36 10 chr2 92957940 92958134 -157729720 + MIR SINE MIR 64 262 0 605 163 0 0 chr2 93058877 93058969 -157628885 + FLAM_C SINE Alu 28 119 -24 2239 101 3 0 chr2 93059007 93059303 -157628551 - AluSx SINE Alu -14 298 2 265 159 0 0 chr2 93059312 93059356 -157628498 - MIR SINE MIR -110 152 109 2114 105 0 7 chr2 93059990 93060284 -157627570 + AluSq SINE Alu 11 302 -11 2294 82 3 3 chr2 93060284 93060587 -157627267 + AluSg SINE Alu 5 307 -3 275 234 8 48 chr2 93060591 93060715 -157627139 - L1M4 LINE L1 -840 5306 5188 216 0 0 0 chr2 93060716 93060740 -157627114 + (T)n Simple_repeat Simple_repeat 1 24 0 1272 57 13 0 chr2 93060743 93060900 -157626954 - AluSq SINE Alu -154 159 1 1725 136 73 4 chr2 93060959 93061232 -157626622 - AluSg SINE Alu -18 292 1 2353 75 16 0 chr2 93061255 93061561 -157626293 - AluY SINE Alu 0 311 1 1661 164 11 0 chr2 93061972 93062240 -157625614 + AluJo SINE Alu 1 271 -41 189 0 0 0 chr2 93062251 93062272 -157625582 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2141 71 0 11 chr2 93062278 93062594 -157625260 + AluSc SINE Alu 1 313 0 2360 46 0 0 chr2 93062595 93062938 -157624916 + AluY SINE Alu 1 343 0 599 146 0 0 chr2 93062945 93063034 -157624820 - FRAM SINE Alu -30 146 58 245 222 16 0 chr2 93063272 93063335 -157624519 + L1ME LINE L1 5614 5677 -487 2109 111 3 13 chr2 93063382 93063689 -157624165 + AluSg SINE Alu 1 304 -6 2471 66 0 0 chr2 93063692 93063996 -157623858 + AluY SINE Alu 1 304 -7 224 120 20 0 chr2 93063999 93064049 -157623805 + (TA)n Simple_repeat Simple_repeat 2 52 0 2230 81 14 0 chr2 93064049 93064345 -157623509 - AluSq SINE Alu -13 300 1 325 231 130 28 chr2 93064385 93064493 -157623361 - L1MC/D LINE L1 -511 5822 5704 1762 156 0 33 chr2 93064494 93064795 -157623059 + AluJo SINE Alu 1 291 -21 2201 106 0 0 chr2 93064795 93065087 -157622767 - AluSx SINE Alu -20 292 1 32 0 0 0 chr2 93065087 93065119 -157622735 + AT_rich Low_complexity Low_complexity 1 32 0 1957 110 57 0 chr2 93065121 93065403 -157622451 + AluSx SINE Alu 1 298 -14 275 284 97 17 chr2 93065699 93065875 -157621979 + L1MB5 LINE L1 5536 5725 -453 325 302 19 0 chr2 93066091 93066197 -157621657 + L1MB5 LINE L1 5830 5937 -237 2387 71 7 0 chr2 93066197 93066506 -157621348 + AluY SINE Alu 1 311 0 458 266 92 24 chr2 93066509 93066716 -157621138 - L1MB5 LINE L1 -27 6147 5927 2491 57 0 16 chr2 93066744 93067060 -157620794 - AluY SINE Alu 0 311 1 1975 112 21 0 chr2 93067112 93067399 -157620455 - AluSx SINE Alu -19 293 1 1677 104 80 59 chr2 93067773 93067918 -157619936 + AluSx SINE Alu 1 141 -171 2234 68 0 20 chr2 93067918 93068242 -157619612 + AluY SINE Alu 1 318 0 1677 104 80 59 chr2 93068242 93068380 -157619474 + AluSx SINE Alu 141 293 -19 243 0 0 0 chr2 93069998 93070025 -157617829 + (TTCC)n Simple_repeat Simple_repeat 4 30 0 835 224 0 0 chr2 93070026 93070169 -157617685 - AluJo/FRAM SINE Alu -36 276 134 2324 83 0 3 chr2 93070170 93070471 -157617383 - AluSg SINE Alu -10 300 1 1674 144 16 60 chr2 93070473 93070672 -157617182 - AluJb SINE Alu -7 305 124 1672 112 124 0 chr2 93070672 93070939 -157616915 + AluSx SINE Alu 1 300 -12 1674 144 16 60 chr2 93070939 93071058 -157616796 - AluJb SINE Alu -188 124 1 2052 41 97 0 chr2 93071444 93071713 -157616141 + AluSp SINE Alu 1 295 -18 1617 115 0 0 chr2 93071792 93072063 -157615791 - AluSg/x SINE Alu 0 312 74 2191 107 3 3 chr2 93072241 93072551 -157615303 + AluSg SINE Alu 1 310 0 2484 61 0 3 chr2 93072627 93072938 -157614916 + AluY SINE Alu 1 310 -1 2228 99 0 0 chr2 93073107 93073400 -157614454 + AluSg SINE Alu 1 293 -17 1829 86 16 8 chr2 93073514 93073769 -157614085 - AluSx SINE Alu -10 302 46 1219 186 122 39 chr2 93073824 93074103 -157613751 - AluJo SINE Alu 0 302 1 2086 111 0 16 chr2 93074521 93074836 -157613018 - AluY SINE Alu -1 310 1 1970 120 0 30 chr2 93074848 93075147 -157612707 - AluSx SINE Alu -22 290 1 272 214 81 20 chr2 93075558 93075672 -157612182 - MLT1C LTR MaLR 0 467 271 652 282 77 3 chr2 93075687 93075974 -157611880 - MLT1C LTR MaLR -154 313 6 191 200 22 0 chr2 93076010 93076055 -157611799 + L2 LINE L2 3015 3060 -253 1477 217 3 0 chr2 93076300 93076599 -157611255 - AluJb SINE Alu -1 311 12 2308 90 7 0 chr2 93076618 93076918 -157610936 - AluSx SINE Alu -10 302 1 462 132 0 0 chr2 93076930 93076998 -157610856 - AluS SINE Alu -244 68 1 * 879 217 32 16 chr2 93076998 93077186 -157610668 - AluJo SINE Alu -16 296 106 2226 97 3 0 chr2 93077192 93077490 -157610364 + AluSq SINE Alu 1 299 -14 765 325 14 0 chr2 93077490 93077785 -157610069 - L1MB8 LINE L1 -259 5919 5621 1661 132 4 4 chr2 93077837 93078088 -157609766 - AluSx SINE Alu -16 296 46 1672 187 3 16 chr2 93078687 93079003 -157608851 + AluJb SINE Alu 1 312 0 1936 107 0 86 chr2 93079358 93079481 -157608373 + AluSx SINE Alu 14 146 -166 2211 76 0 61 chr2 93079481 93079810 -157608044 + AluSc SINE Alu 1 309 0 1936 107 0 86 chr2 93079810 93080013 -157607841 + AluSx SINE Alu 146 312 0 343 284 71 14 chr2 93080649 93080790 -157607064 + MLT1D LTR MaLR 8 156 -349 1981 131 0 0 chr2 93080808 93081099 -157606755 - AluSg SINE Alu -1 309 19 2185 111 3 3 chr2 93081099 93081404 -157606450 - AluSp SINE Alu -7 306 1 210 306 82 34 chr2 93081432 93081579 -157606275 - L2 LINE L2 -480 2834 2681 210 213 0 50 chr2 93083982 93084062 -157603792 + C-rich Low_complexity Low_complexity 2 77 0 207 247 6 80 chr2 93084153 93084315 -157603539 + C-rich Low_complexity Low_complexity 6 155 0 1801 126 28 47 chr2 93086377 93086695 -157601159 - AluSx SINE Alu 0 312 1 200 176 0 0 chr2 93088193 93088227 -157599627 + CT-rich Low_complexity Low_complexity 2 35 0 23 0 0 0 chr2 93091851 93091874 -157595980 + GC_rich Low_complexity Low_complexity 1 23 0 191 61 30 0 chr2 93094108 93094141 -157593713 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 2062 130 3 0 chr2 93095468 93095767 -157592087 - AluSg SINE Alu -10 300 1 227 30 0 30 chr2 93095769 93095802 -157592052 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1974 90 25 14 chr2 93095802 93096081 -157591773 - AluY SINE Alu -29 282 1 1141 205 11 42 chr2 93096085 93096368 -157591486 + AluJo SINE Alu 15 288 -24 2069 120 3 0 chr2 93096486 93096778 -157591076 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr2 93098476 93098498 -157589356 + AT_rich Low_complexity Low_complexity 1 22 0 221 111 44 0 chr2 93098983 93099028 -157588826 + C-rich Low_complexity Low_complexity 5 51 0 22 0 0 0 chr2 93099711 93099733 -157588121 + GC_rich Low_complexity Low_complexity 1 22 0 435 92 0 0 chr2 93099804 93099869 -157587985 + (TCC)n Simple_repeat Simple_repeat 1 65 0 22 0 0 0 chr2 93100291 93100313 -157587541 + GC_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 93101713 93101743 -157586111 + GC_rich Low_complexity Low_complexity 1 30 0 231 315 24 36 chr2 93102390 93102555 -157585299 + (CCCA)n Simple_repeat Simple_repeat 2 164 0 840 163 19 12 chr2 93102556 93102993 -157584861 + (TCCA)n Simple_repeat Simple_repeat 1 440 0 879 154 16 16 chr2 93103007 93103531 -157584323 + (TCCA)n Simple_repeat Simple_repeat 1 524 0 502 127 0 0 chr2 93103535 93103606 -157584248 - AluSg/x SINE Alu -37 273 203 1001 98 0 0 chr2 93103606 93103739 -157584115 - AluJb SINE Alu -179 133 1 2334 74 0 29 chr2 93103742 93104052 -157583802 - AluSx SINE Alu -11 301 1 1543 189 7 23 chr2 93104308 93104609 -157583245 - AluJb SINE Alu -16 296 1 1698 146 17 37 chr2 93104656 93104950 -157582904 - AluJo SINE Alu -18 294 7 2179 110 0 10 chr2 93104975 93105285 -157582569 - AluSx SINE Alu -5 307 1 1028 55 16 0 chr2 93105285 93105413 -157582441 - AluSq/x SINE Alu -177 136 7 200 219 14 27 chr2 93105602 93105675 -157582179 + C-rich Low_complexity Low_complexity 2 73 0 183 129 0 0 chr2 93106436 93106467 -157581387 + (AGGGGG)n Simple_repeat Simple_repeat 4 34 0 195 42 0 0 chr2 93106746 93106770 -157581084 + (CGGGGG)n Simple_repeat Simple_repeat 1 24 0 24 67 0 0 chr2 93106831 93106876 -157580978 + GC_rich Low_complexity Low_complexity 1 45 0 232 247 13 52 chr2 93107154 93107231 -157580623 - MIR SINE MIR -72 190 117 2225 64 0 3 chr2 93107301 93107610 -157580244 + AluSg SINE Alu 1 308 0 2209 108 0 0 chr2 93107622 93107929 -157579925 + AluSx SINE Alu 1 307 -5 1777 138 11 3 chr2 93108666 93108972 -157578882 - AluSx SINE Alu 0 308 1 2324 70 0 3 chr2 93108972 93109271 -157578583 - AluY SINE Alu -13 298 1 1014 89 0 15 chr2 93109272 93109407 -157578447 - AluJo/FLAM SINE Alu -169 133 1 2314 56 7 0 chr2 93109774 93110079 -157577775 - AluY SINE Alu 0 307 1 1810 172 0 3 chr2 93110321 93110617 -157577237 + AluJo SINE Alu 5 299 -13 975 172 11 0 chr2 93110617 93110791 -157577063 + AluJo/FRAM SINE Alu 134 309 -3 895 219 28 25 chr2 93110791 93111037 -157576817 - L1MB7 LINE L1 -31 6153 5907 1272 107 0 0 chr2 93111037 93111215 -157576639 - AluSg/x SINE Alu -1 311 134 2312 91 3 0 chr2 93111215 93111513 -157576341 - AluSp SINE Alu -14 299 1 2172 99 0 3 chr2 93111566 93111879 -157575975 + AluSq SINE Alu 4 315 0 202 261 0 0 chr2 93112437 93112483 -157575371 - MIR SINE MIR -140 122 77 215 328 0 66 chr2 93113062 93113245 -157574609 + G-rich Low_complexity Low_complexity 4 174 0 * 237 302 11 67 chr2 93113196 93113375 -157574479 + GA-rich Low_complexity Low_complexity 5 173 0 336 273 11 64 chr2 93113419 93113606 -157574248 + GA-rich Low_complexity Low_complexity 2 178 0 240 286 0 87 chr2 93113648 93113844 -157574010 + G-rich Low_complexity Low_complexity 1 179 0 738 185 0 8 chr2 93114269 93114399 -157573455 + FLAM_C SINE Alu 1 129 -14 351 0 0 0 chr2 93114399 93114438 -157573416 + (TG)n Simple_repeat Simple_repeat 2 40 0 2226 84 0 0 chr2 93114443 93114730 -157573124 + AluSg SINE Alu 2 288 -22 841 99 0 8 chr2 93114921 93115042 -157572812 - AluSq/x SINE Alu -193 120 1 2271 80 3 10 chr2 93115541 93115840 -157572014 - AluSg SINE Alu -13 297 1 202 305 17 0 chr2 93115847 93115906 -157571948 - L2 LINE L2 -16 3297 3238 262 255 19 38 chr2 93116036 93116142 -157571712 - L2 LINE L2 -352 2961 2858 219 230 0 27 chr2 93116364 93116438 -157571416 + C-rich Low_complexity Low_complexity 5 76 0 201 310 26 86 chr2 93116600 93116716 -157571138 - MIR SINE MIR -78 184 76 2040 68 11 0 chr2 93116720 93116985 -157570869 + AluSx SINE Alu 30 297 -15 26 30 0 0 chr2 93117049 93117082 -157570772 + AT_rich Low_complexity Low_complexity 1 33 0 1526 162 18 67 chr2 93117104 93117260 -157570594 + AluJb SINE Alu 1 134 -178 2477 47 3 0 chr2 93117260 93117557 -157570297 + AluY SINE Alu 1 298 -13 1526 162 18 67 chr2 93117557 93117728 -157570126 + AluJb SINE Alu 134 312 0 518 0 0 16 chr2 93117741 93117804 -157570050 + (GAA)n Simple_repeat Simple_repeat 2 63 0 470 184 0 0 chr2 93117804 93117880 -157569974 + FRAM SINE Alu 21 96 -80 2016 140 0 22 chr2 93117880 93118195 -157569659 - AluSx SINE Alu -4 308 1 657 183 0 17 chr2 93118195 93118315 -157569539 - AluJb SINE Alu -13 299 182 2089 122 0 3 chr2 93118339 93118651 -157569203 + AluSx SINE Alu 1 311 -1 1234 296 30 6 chr2 93118651 93119124 -157568730 - L1MB5 LINE L1 -46 6128 5645 2594 27 0 0 chr2 93119132 93119431 -157568423 - AluY SINE Alu -12 299 1 200 152 0 0 chr2 93119544 93119577 -157568277 - MIR SINE MIR -64 144 112 2512 71 0 0 chr2 93120367 93120678 -157567176 + AluSx SINE Alu 1 311 -1 230 234 9 0 chr2 93120691 93120798 -157567056 + GA-rich Low_complexity Low_complexity 1 108 0 529 138 31 25 chr2 93120824 93120983 -157566871 + (CAGAGA)n Simple_repeat Simple_repeat 5 164 0 249 186 90 30 chr2 93121416 93121490 -157566364 - L1MB8 LINE L1 0 6184 6105 540 89 13 0 chr2 93121503 93121582 -157566272 + FLAM_A SINE Alu 53 132 -10 1900 104 56 17 chr2 93121582 93121870 -157565984 + AluSq SINE Alu 1 299 -14 254 306 37 46 chr2 93121872 93121980 -157565874 - MIR SINE MIR -66 196 90 2144 100 0 0 chr2 93122035 93122324 -157565530 - AluSg SINE Alu -21 289 1 2675 23 0 0 chr2 93122334 93122638 -157565216 - AluY SINE Alu -7 304 1 1656 146 0 108 chr2 93122666 93122989 -157564865 + AluJo SINE Alu 1 288 -14 207 185 62 12 chr2 93122989 93123070 -157564784 + (TA)n Simple_repeat Simple_repeat 1 85 0 366 264 47 27 chr2 93123071 93123085 -157564769 + L1MC4 LINE L1 7294 7306 -736 2039 102 10 33 chr2 93123085 93123389 -157564465 + AluSx SINE Alu 1 297 -15 366 264 47 27 chr2 93123389 93123522 -157564332 + L1MC4 LINE L1 7306 7444 -598 273 244 67 0 chr2 93124119 93124209 -157563645 - MER20 DNA MER1_type -116 103 8 2317 92 0 9 chr2 93124413 93124728 -157563126 - AluSx SINE Alu 0 312 1 666 250 65 5 chr2 93124754 93124954 -157562900 - MER20 DNA MER1_type -3 216 5 283 305 70 23 chr2 93125730 93125858 -157561996 + MIR SINE MIR 116 249 -13 1149 113 0 0 chr2 93125858 93126090 -157561764 + (TGAA)n Simple_repeat Simple_repeat 1 232 0 2506 58 0 0 chr2 93126178 93126489 -157561365 - AluY SINE Alu 0 311 1 1710 123 0 0 chr2 93126490 93126725 -157561129 - AluSx SINE Alu -14 298 64 202 171 0 0 chr2 93126730 93126765 -157561089 + MIR SINE MIR 110 144 -118 279 130 0 0 chr2 93126781 93126835 -157561019 + (T)n Simple_repeat Simple_repeat 1 54 0 1296 99 0 17 chr2 93126876 93127049 -157560805 - AluSg/x SINE Alu -6 306 135 2262 86 0 10 chr2 93127049 93127351 -157560503 - AluSc SINE Alu -10 299 1 2059 119 0 13 chr2 93127375 93127678 -157560176 - AluJb SINE Alu -13 299 1 201 289 0 0 chr2 93128555 93128600 -157559254 - L2 LINE L2 -3 3310 3266 465 238 29 6 chr2 93128680 93128992 -157558862 + C-rich Low_complexity Low_complexity 1 319 0 347 253 7 96 chr2 93129158 93129282 -157558572 + L2 LINE L2 3181 3292 -21 1570 161 30 54 chr2 93129282 93129409 -157558445 + AluJb SINE Alu 1 129 -183 2195 116 0 0 chr2 93129409 93129710 -157558144 - AluSx SINE Alu -11 301 1 1570 161 30 54 chr2 93129710 93129880 -157557974 + AluJb SINE Alu 129 291 -21 347 253 7 96 chr2 93129880 93129901 -157557953 + L2 LINE L2 3292 3313 0 2226 98 26 0 chr2 93129902 93130207 -157557647 + AluSq SINE Alu 1 313 0 635 156 0 0 chr2 93130224 93130320 -157557534 + AluS SINE Alu 1 96 -217 534 101 0 0 chr2 93130343 93130435 -157557419 + AluSg/x SINE Alu 212 303 0 191 222 270 0 chr2 93130911 93130974 -157556880 + MIR SINE MIR 69 148 -114 1559 129 4 12 chr2 93131208 93131449 -157556405 - AluSq SINE Alu -15 298 60 1892 154 0 3 chr2 93131486 93131779 -157556075 + AluJo SINE Alu 1 292 -20 937 121 0 20 chr2 93131782 93131964 -157555890 + AluSg/x SINE Alu 164 310 0 258 0 0 29 chr2 93131899 93132060 -157555794 + (CAAAA)n Simple_repeat Simple_repeat 3 162 0 343 299 102 22 chr2 93132873 93133010 -157554844 + MIR3 SINE MIR 50 197 -11 2204 98 0 0 chr2 93133453 93133749 -157554105 - AluSx SINE Alu -3 309 14 1335 126 24 0 chr2 93133775 93133982 -157553872 - AluJo SINE Alu -18 294 83 2317 79 20 0 chr2 93134151 93134456 -157553398 - AluSx SINE Alu -1 311 1 510 300 18 35 chr2 93134473 93134643 -157553211 - MIR SINE MIR -48 214 48 230 132 0 0 chr2 93134932 93134970 -157552884 - L2 LINE L2 -14 3258 3221 213 316 13 0 chr2 93135316 93135395 -157552459 - L3 LINE CR1 -40 1537 1458 231 190 69 17 chr2 93136082 93136140 -157551714 + MER53 DNA DNA 1 61 -128 461 52 0 0 chr2 93136188 93136246 -157551608 + AluY SINE Alu 77 134 -177 2135 119 0 0 chr2 93136246 93136548 -157551306 + AluSx SINE Alu 1 302 -10 339 290 9 2 chr2 93137082 93137229 -157550625 + MIR SINE MIR 48 147 -61 25 31 0 0 chr2 93137868 93137900 -157549954 + GC_rich Low_complexity Low_complexity 1 32 0 242 230 149 0 chr2 93137994 93138068 -157549786 + MIR SINE MIR 108 192 -70 1852 92 67 25 chr2 93138625 93138909 -157548945 + AluSg SINE Alu 2 297 -13 569 207 0 67 chr2 93138974 93139109 -157548745 - AluJ SINE Alu -62 250 125 389 280 83 42 chr2 93139131 93139299 -157548555 + L1MC5 LINE L1 7577 7751 -210 189 107 0 0 chr2 93139302 93139330 -157548524 + (TA)n Simple_repeat Simple_repeat 2 29 0 2128 95 3 0 chr2 93139330 93139614 -157548240 - AluY SINE Alu -25 286 2 859 126 0 15 chr2 93139618 93139753 -157548101 - AluJ SINE Alu -179 133 1 857 99 0 0 chr2 93140759 93140870 -157546984 + AluJb SINE Alu 1 111 -201 238 26 51 0 chr2 93140878 93140917 -157546937 + (TAAAA)n Simple_repeat Simple_repeat 1 41 0 1795 104 75 11 chr2 93140923 93141201 -157546653 + AluSx SINE Alu 1 296 -16 2058 113 3 13 chr2 93141205 93141575 -157546279 + AluSp SINE Alu 6 313 0 2526 33 3 0 chr2 93141672 93141971 -157545883 - AluY SINE Alu -11 300 1 2275 102 0 9 chr2 93142022 93142410 -157545444 + AluSx SINE Alu 1 385 0 2517 61 3 0 chr2 93142414 93142724 -157545130 + AluY SINE Alu 1 311 0 825 157 0 20 chr2 93142910 93143057 -157544797 + FRAM SINE Alu 20 163 -13 713 219 0 0 chr2 93143111 93143248 -157544606 - FLAM_C SINE Alu -6 137 1 377 211 169 30 chr2 93143435 93143601 -157544253 + MLT1K LTR MaLR 380 568 -20 1965 71 31 87 chr2 93144637 93144960 -157542894 - AluSg SINE Alu -3 307 3 213 299 9 28 chr2 93145834 93145941 -157541913 + C-rich Low_complexity Low_complexity 4 108 0 313 310 0 23 chr2 93146763 93146934 -157540920 + G-rich Low_complexity Low_complexity 6 172 0 1454 145 4 62 chr2 93147737 93148013 -157539841 + AluJo SINE Alu 41 300 -12 2194 103 0 16 chr2 93148017 93148327 -157539527 + AluSx SINE Alu 7 311 -1 261 0 0 0 chr2 93148432 93148461 -157539393 + (CA)n Simple_repeat Simple_repeat 1 29 0 283 349 139 0 chr2 93148540 93148712 -157539142 - MIR SINE MIR -19 243 48 2324 99 0 3 chr2 93148915 93149227 -157538627 + AluY SINE Alu 1 311 0 2261 75 10 3 chr2 93149243 93149538 -157538316 + AluY SINE Alu 1 297 -14 188 339 0 17 chr2 93149649 93149708 -157538146 - L2 LINE L2 -14 3299 3242 2218 73 13 3 chr2 93149823 93150123 -157537731 - AluSp SINE Alu -10 303 1 736 183 49 21 chr2 93150123 93150260 -157537594 - AluJo SINE Alu -171 141 1 216 283 34 34 chr2 93150938 93151115 -157536739 + (CCCG)n Simple_repeat Simple_repeat 4 180 0 271 176 44 59 chr2 93151885 93152021 -157535833 + (CAGAGA)n Simple_repeat Simple_repeat 2 135 0 377 220 40 87 chr2 93154148 93154298 -157533556 + MIR SINE MIR 35 177 -85 429 213 88 0 chr2 93154305 93154441 -157533413 + MER77 LTR ERV1 11 158 -447 1929 148 3 0 chr2 93154582 93154885 -157532969 + AluSx SINE Alu 1 304 -8 223 320 40 20 chr2 93155930 93156030 -157531824 - L2 LINE L2 -27 3286 3185 342 189 17 46 chr2 93156052 93156291 -157531563 + G-rich Low_complexity Low_complexity 1 231 0 379 220 78 5 chr2 93156584 93156722 -157531132 + MER20 DNA MER1_type 33 178 -58 211 347 0 0 chr2 93157321 93157497 -157530357 + G-rich Low_complexity Low_complexity 3 178 0 * 213 190 0 150 chr2 93157398 93157498 -157530356 + (CGGGG)n Simple_repeat Simple_repeat 5 89 0 2045 58 12 0 chr2 93158418 93158676 -157529178 - AluY SINE Alu -49 262 2 417 121 0 0 chr2 93158703 93158761 -157529093 + AluS SINE Alu 2 59 -259 304 261 45 11 chr2 93158771 93158859 -157528995 + MIR SINE MIR 80 170 -92 1155 192 44 0 chr2 93158911 93159140 -157528714 + AluJb SINE Alu 49 287 -25 2150 91 0 3 chr2 93159175 93159461 -157528393 + AluSx SINE Alu 28 312 0 446 244 55 8 chr2 93159913 93160040 -157527814 + MER20 DNA MER1_type 5 137 -82 520 158 40 10 chr2 93160132 93160233 -157527621 + AluJo SINE Alu 33 136 -176 221 26 0 77 chr2 93161943 93161982 -157525872 + (CCCCAG)n Simple_repeat Simple_repeat 2 37 0 224 26 0 79 chr2 93162236 93162274 -157525580 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 302 89 0 54 chr2 93162814 93162870 -157524984 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 245 0 0 79 chr2 93163012 93163050 -157524804 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 219 193 53 100 chr2 93163080 93163230 -157524624 + (CCCCAG)n Simple_repeat Simple_repeat 3 145 0 245 0 0 79 chr2 93163260 93163298 -157524556 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93164217 93164255 -157523599 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 302 89 0 54 chr2 93164285 93164341 -157523513 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 245 0 0 79 chr2 93164427 93164465 -157523389 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93164725 93164763 -157523091 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 248 125 0 54 chr2 93164793 93164849 -157523005 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 302 89 0 54 chr2 93165215 93165271 -157522583 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 245 0 0 79 chr2 93165413 93165451 -157522403 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 189 0 0 0 chr2 93165549 93165570 -157522284 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 245 0 0 79 chr2 93165667 93165705 -157522149 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 215 91 0 68 chr2 93166471 93166515 -157521339 + (CCCCAG)n Simple_repeat Simple_repeat 3 43 0 245 0 0 79 chr2 93166657 93166695 -157521159 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 189 0 0 0 chr2 93166793 93166814 -157521040 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 245 0 0 79 chr2 93166911 93166949 -157520905 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 191 0 0 94 chr2 93167659 93167691 -157520163 + (CCCCAG)n Simple_repeat Simple_repeat 3 31 0 245 0 0 79 chr2 93167833 93167871 -157519983 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 214 182 23 80 chr2 93167901 93167989 -157519865 + (CCCCAG)n Simple_repeat Simple_repeat 3 85 0 245 0 0 79 chr2 93168107 93168145 -157519709 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93168231 93168269 -157519585 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93169067 93169105 -157518749 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 215 120 0 60 chr2 93169135 93169185 -157518669 + (CCCCAG)n Simple_repeat Simple_repeat 3 49 0 189 0 0 0 chr2 93169215 93169236 -157518618 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 263 0 0 75 chr2 93169331 93169371 -157518483 + (CCCCAG)n Simple_repeat Simple_repeat 1 37 0 192 40 0 0 chr2 93169991 93170016 -157517838 + (CCCCG)n Simple_repeat Simple_repeat 5 29 0 335 97 0 48 chr2 93171324 93171386 -157516468 + (CCCCAG)n Simple_repeat Simple_repeat 3 61 0 245 0 0 79 chr2 93171528 93171566 -157516288 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 248 125 0 54 chr2 93171596 93171652 -157516202 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 189 0 0 0 chr2 93171682 93171703 -157516151 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 245 0 0 79 chr2 93171800 93171838 -157516016 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 262 186 66 98 chr2 93174220 93174403 -157513451 + (CCCCAG)n Simple_repeat Simple_repeat 3 179 0 2265 71 3 19 chr2 93175178 93175488 -157512366 + AluSx SINE Alu 1 305 -7 227 221 0 89 chr2 93176061 93176489 -157511365 + G-rich Low_complexity Low_complexity 1 389 0 225 216 47 47 chr2 93176518 93176689 -157511165 + (CGGGG)n Simple_repeat Simple_repeat 1 171 0 211 221 49 43 chr2 93176818 93176981 -157510873 + (CGGGG)n Simple_repeat Simple_repeat 1 164 0 912 125 7 7 chr2 93177242 93177394 -157510460 + AluY SINE Alu 159 310 -1 1178 298 30 8 chr2 93177394 93177868 -157509986 - L1MB5 LINE L1 -46 6128 5645 2606 27 0 0 chr2 93177876 93178176 -157509678 - AluY SINE Alu -11 300 1 200 152 0 0 chr2 93178289 93178322 -157509532 - MIR SINE MIR -64 144 112 225 216 47 47 chr2 93178654 93178825 -157509029 + (CCCCG)n Simple_repeat Simple_repeat 1 171 0 * 227 221 0 89 chr2 93178772 93178962 -157508892 + C-rich Low_complexity Low_complexity 3 175 0 2535 64 0 0 chr2 93179475 93179786 -157508068 + AluSx SINE Alu 1 311 -1 320 356 121 23 chr2 93179815 93180121 -157507733 + HAL1 LINE L1 875 1210 -1297 249 186 90 30 chr2 93180548 93180622 -157507232 - L1MB8 LINE L1 0 6184 6105 540 89 13 0 chr2 93180635 93180714 -157507140 + FLAM_A SINE Alu 53 132 -10 1900 104 56 17 chr2 93180714 93181002 -157506852 + AluSq SINE Alu 1 299 -14 254 306 37 46 chr2 93181004 93181112 -157506742 - MIR SINE MIR -66 196 90 846 216 93 95 chr2 93181287 93181649 -157506205 + MLT1C LTR MaLR 38 400 -67 1506 158 55 38 chr2 93181649 93181800 -157506054 - AluJo SINE Alu -10 302 155 1944 122 10 14 chr2 93181800 93182095 -157505759 - AluSp SINE Alu -19 294 1 1506 158 55 38 chr2 93182095 93182234 -157505620 - AluJo SINE Alu -157 155 7 846 216 93 95 chr2 93182234 93182302 -157505552 + MLT1C LTR MaLR 400 467 0 306 250 0 0 chr2 93182345 93182409 -157505445 - MIR SINE MIR -157 105 42 1979 95 12 58 chr2 93183988 93184107 -157503747 + AluSx SINE Alu 1 124 -188 2229 56 9 66 chr2 93184107 93184426 -157503428 + AluY SINE Alu 1 301 -10 1979 95 12 58 chr2 93184426 93184633 -157503221 + AluSx SINE Alu 124 312 0 232 247 11 81 chr2 93186584 93186770 -157501084 + (CACCC)n Simple_repeat Simple_repeat 5 177 0 * 300 261 11 69 chr2 93186704 93186892 -157500962 + C-rich Low_complexity Low_complexity 2 178 0 364 271 45 58 chr2 93188257 93188327 -157499527 - MIR SINE MIR -45 217 148 1495 129 31 111 chr2 93188327 93188652 -157499202 + AluJo SINE Alu 1 299 -13 1981 142 0 13 chr2 93188655 93188957 -157498897 + AluSx SINE Alu 1 298 -14 364 271 45 58 chr2 93188957 93189037 -157498817 - MIR SINE MIR -116 146 65 715 216 48 24 chr2 93189599 93189766 -157498088 + AluJo SINE Alu 120 290 -22 2333 73 0 3 chr2 93189768 93190071 -157497783 + AluY SINE Alu 1 302 -9 199 242 8 91 chr2 93190156 93190288 -157497566 + L2 LINE L2 2830 2950 -322 892 149 0 2 chr2 93190551 93190792 -157497062 + AluJ SINE Alu 1 299 -13 2166 105 0 3 chr2 93190924 93191218 -157496636 + AluSx SINE Alu 1 293 -19 1807 109 28 35 chr2 93191222 93191505 -157496349 + AluSp SINE Alu 2 282 -31 221 26 0 77 chr2 93192227 93192266 -157495588 + (CCCCAG)n Simple_repeat Simple_repeat 2 37 0 299 0 0 68 chr2 93192352 93192396 -157495458 + (CCCCAG)n Simple_repeat Simple_repeat 3 43 0 245 0 0 79 chr2 93192538 93192576 -157495278 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 191 0 0 94 chr2 93192606 93192638 -157495216 + (CCCCAG)n Simple_repeat Simple_repeat 3 31 0 245 0 0 79 chr2 93192818 93192856 -157494998 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93192942 93192980 -157494874 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 245 0 0 79 chr2 93193010 93193048 -157494806 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 236 68 0 68 chr2 93193078 93193122 -157494732 + (CCCCAG)n Simple_repeat Simple_repeat 3 43 0 191 0 0 94 chr2 93193208 93193240 -157494614 + (CCCCAG)n Simple_repeat Simple_repeat 3 31 0 245 0 0 79 chr2 93193500 93193538 -157494316 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 248 125 0 54 chr2 93193568 93193624 -157494230 + (CCCCAG)n Simple_repeat Simple_repeat 3 55 0 189 0 0 0 chr2 93193654 93193675 -157494179 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 191 0 0 94 chr2 93193716 93193748 -157494106 + (CCCCAG)n Simple_repeat Simple_repeat 3 31 0 263 0 0 75 chr2 93193776 93193816 -157494038 + (CCCCAG)n Simple_repeat Simple_repeat 1 37 0 215 91 0 68 chr2 93195873 93195917 -157491937 + (CCCCAG)n Simple_repeat Simple_repeat 3 43 0 245 0 0 79 chr2 93196059 93196097 -157491757 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 215 120 0 60 chr2 93196127 93196177 -157491677 + (CCCCAG)n Simple_repeat Simple_repeat 3 49 0 189 0 0 0 chr2 93196207 93196228 -157491626 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 245 0 0 79 chr2 93196325 93196363 -157491491 + (CCCCAG)n Simple_repeat Simple_repeat 3 37 0 2265 71 3 19 chr2 93198087 93198397 -157489457 + AluSx SINE Alu 1 305 -7 190 265 36 48 chr2 93198562 93198645 -157489209 - MIR SINE MIR -96 166 85 359 154 39 0 chr2 93199307 93199385 -157488469 + MLT1K LTR MaLR 159 239 -349 1570 155 9 60 chr2 93199675 93199991 -157487863 + AluJo SINE Alu 1 300 -12 488 242 33 0 chr2 93201966 93202086 -157485768 + FLAM_C SINE Alu 4 127 -16 457 284 39 6 chr2 93202559 93202952 -157484902 + MLT1D LTR MaLR 1 433 -72 401 265 129 48 chr2 93203515 93203698 -157484156 + MIR SINE MIR 18 209 -53 275 274 10 59 chr2 93203712 93203814 -157484040 - MER58B DNA MER1_type -17 324 228 2016 146 0 9 chr2 93204030 93204345 -157483509 + AluSq SINE Alu 1 312 -1 2252 87 0 0 chr2 93204622 93204910 -157482944 + AluSg SINE Alu 1 288 -22 962 259 39 65 chr2 93204912 93205157 -157482697 + L1MB7 LINE L1 5803 6053 -131 2123 118 0 3 chr2 93205157 93205470 -157482384 + AluSx SINE Alu 1 312 0 2313 90 0 7 chr2 93205476 93205786 -157482068 + AluSx SINE Alu 1 308 -4 962 259 39 65 chr2 93205786 93205916 -157481938 + L1MB7 LINE L1 6058 6175 -9 283 312 7 29 chr2 93207757 93207895 -157479959 + L1ME4a LINE L1 5966 6100 -21 260 284 94 39 chr2 93208491 93208814 -157479040 - L2 LINE L2 -253 3019 2589 285 219 0 77 chr2 93210118 93210301 -157477553 + C-rich Low_complexity Low_complexity 5 173 0 661 0 0 0 chr2 93210783 93210862 -157476992 + U6 snRNA snRNA 1 79 -28 1445 92 0 57 chr2 93210979 93211208 -157476646 + AluSg/x SINE Alu 85 300 -12 1367 85 0 16 chr2 93211537 93211725 -157476129 - AluSg/x SINE Alu -19 291 107 2400 57 3 0 chr2 93211726 93212023 -157475831 - AluY SINE Alu -13 298 1 2097 93 4 0 chr2 93212315 93212630 -157475224 - AluSx SINE Alu 0 316 1 288 284 58 34 chr2 93213011 93213157 -157474697 - MIR SINE MIR -58 150 7 2136 85 3 10 chr2 93213444 93213739 -157474115 + AluSc SINE Alu 17 309 0 2071 125 6 10 chr2 93213840 93214153 -157473701 + AluSx SINE Alu 1 312 0 21 36 0 0 chr2 93214401 93214429 -157473425 + GC_rich Low_complexity Low_complexity 1 28 0 198 111 0 28 chr2 93214550 93214586 -157473268 - MIR SINE MIR -65 143 109 2170 111 0 25 chr2 93215030 93215345 -157472509 + AluSx SINE Alu 2 308 -4 1543 142 55 25 chr2 93215422 93215559 -157472295 + AluJb SINE Alu 5 137 -175 2264 85 10 0 chr2 93215559 93215852 -157472002 + AluSp SINE Alu 1 296 -17 1543 142 55 25 chr2 93215852 93215989 -157471865 + AluJb SINE Alu 137 287 -25 913 135 0 0 chr2 93216000 93216133 -157471721 + FLAM_C SINE Alu 1 133 0 180 111 0 0 chr2 93216194 93216221 -157471633 + (CAAT)n Simple_repeat Simple_repeat 1 27 0 265 194 29 72 chr2 93216287 93216358 -157471496 + (TAA)n Simple_repeat Simple_repeat 3 76 -59 2243 50 0 7 chr2 93216358 93216665 -157471189 + AluY SINE Alu 6 310 0 265 194 29 72 chr2 93216665 93216679 -157471175 + (TAA)n Simple_repeat Simple_repeat 76 89 -46 2104 106 0 0 chr2 93216679 93216963 -157470891 + AluSg SINE Alu 1 284 -26 265 194 29 72 chr2 93216963 93217014 -157470840 + (TAA)n Simple_repeat Simple_repeat 89 135 0 318 348 35 0 chr2 93217061 93217202 -157470652 - MIR SINE MIR -76 186 41 360 308 14 19 chr2 93217559 93217914 -157469940 + G-rich Low_complexity Low_complexity 1 353 0 299 326 11 28 chr2 93217992 93218173 -157469681 + G-rich Low_complexity Low_complexity 3 180 0 209 139 23 0 chr2 93218496 93218539 -157469315 + G-rich Low_complexity Low_complexity 4 47 0 40 79 0 0 chr2 93218559 93218648 -157469206 + GC_rich Low_complexity Low_complexity 1 89 0 32 67 0 0 chr2 93218737 93218797 -157469057 + GC_rich Low_complexity Low_complexity 1 60 0 818 169 0 0 chr2 93219379 93219503 -157468351 + AluJo/FLAM SINE Alu 8 131 -181 2383 35 3 0 chr2 93219504 93219810 -157468044 + AluY SINE Alu 1 307 0 1965 132 23 10 chr2 93219820 93220124 -157467730 + AluSx SINE Alu 1 308 -4 2363 93 0 0 chr2 93220125 93220435 -157467419 + AluY SINE Alu 1 310 -1 2063 121 23 0 chr2 93220769 93221074 -157466780 - AluSx SINE Alu 0 312 1 838 152 0 0 chr2 93221262 93221387 -157466467 + FLAM_C SINE Alu 1 125 -18 1341 38 0 0 chr2 93221393 93221551 -157466303 + L1PA3 LINE L1 5998 6155 0 330 211 99 0 chr2 93221551 93221622 -157466232 + L1M4 LINE L1 4349 4426 -1720 2204 91 3 0 chr2 93221627 93221925 -157465929 + AluSq SINE Alu 1 299 -14 2213 72 3 3 chr2 93221925 93222229 -157465625 + AluY SINE Alu 1 304 -7 25 0 0 0 chr2 93223449 93223474 -157464380 + GC_rich Low_complexity Low_complexity 1 25 0 255 365 32 0 chr2 93223715 93223841 -157464013 - MIR SINE MIR -109 153 24 200 146 21 21 chr2 93226068 93226116 -157461738 + (CCG)n Simple_repeat Simple_repeat 1 48 0 2252 80 3 3 chr2 93226562 93226864 -157460990 - AluSx SINE Alu -8 304 3 709 155 80 37 chr2 93226890 93226959 -157460895 + L1PB1 LINE L1 5725 5790 -361 270 0 0 0 chr2 93226959 93226989 -157460865 + (CA)n Simple_repeat Simple_repeat 1 30 0 709 155 80 37 chr2 93226989 93227106 -157460748 + L1PB1 LINE L1 5790 5919 -232 1436 39 6 6 chr2 93227108 93227286 -157460568 - AluY SINE Alu -119 192 15 2075 129 0 0 chr2 93227779 93228073 -157459781 - AluSq SINE Alu -10 303 10 1959 138 7 0 chr2 93228075 93228366 -157459488 - AluJo SINE Alu -19 293 1 674 172 66 0 chr2 93228376 93228498 -157459356 - AluJo SINE Alu -176 136 7 2274 100 0 6 chr2 93228503 93228814 -157459040 - AluSx SINE Alu -3 309 1 229 254 0 32 chr2 93229504 93229567 -157458287 - MIR SINE MIR -109 153 93 2220 99 3 0 chr2 93229904 93230207 -157457647 - AluSx SINE Alu -8 304 1 213 313 0 0 chr2 93230530 93230594 -157457260 + MIR SINE MIR 108 171 -91 223 336 69 9 chr2 93230913 93231029 -157456825 - MIR SINE MIR -118 144 22 21 0 0 0 chr2 93231400 93231421 -157456433 + GC_rich Low_complexity Low_complexity 1 21 0 35 0 0 0 chr2 93231490 93231525 -157456329 + GC_rich Low_complexity Low_complexity 1 35 0 23 68 0 0 chr2 93231649 93231693 -157456161 + GC_rich Low_complexity Low_complexity 1 44 0 23 68 0 0 chr2 93232180 93232224 -157455630 + GC_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr2 93232334 93232357 -157455497 + GC_rich Low_complexity Low_complexity 1 23 0 230 303 30 0 chr2 93234216 93234282 -157453572 - MIR SINE MIR -99 163 96 30 105 0 0 chr2 93234870 93234984 -157452870 + GC_rich Low_complexity Low_complexity 1 114 0 279 0 0 0 chr2 93234997 93235028 -157452826 + (TGG)n Simple_repeat Simple_repeat 3 33 0 21 36 0 0 chr2 93235146 93235174 -157452680 + GC_rich Low_complexity Low_complexity 1 28 0 180 256 0 0 chr2 93235456 93235495 -157452359 + MIR SINE MIR 111 149 -113 1571 140 55 0 chr2 93235518 93235775 -157452079 + AluJo SINE Alu 22 292 -20 1777 98 0 0 chr2 93235785 93236020 -157451834 + AluSq SINE Alu 1 235 -78 2363 67 0 3 chr2 93236027 93236324 -157451530 - AluY SINE Alu -15 296 1 2090 124 3 0 chr2 93236528 93236819 -157451035 + AluJo SINE Alu 2 293 -19 1197 124 5 11 chr2 93236819 93236996 -157450858 + AluSg/x SINE Alu 134 311 -1 2524 49 0 3 chr2 93237046 93237352 -157450502 + AluY SINE Alu 1 305 -6 887 142 13 19 chr2 93237517 93237672 -157450182 - FRAM SINE Alu -16 160 7 404 120 0 33 chr2 93237945 93238037 -157449817 + (GGA)n Simple_repeat Simple_repeat 1 89 0 818 171 0 0 chr2 93240294 93240423 -157447431 - FLAM_C SINE Alu -4 129 1 23 0 0 0 chr2 93240766 93240789 -157447065 + GC_rich Low_complexity Low_complexity 1 23 0 1859 127 32 0 chr2 93240997 93241280 -157446574 - AluJo SINE Alu -16 296 5 2406 46 0 0 chr2 93241294 93241605 -157446249 - AluY SINE Alu 0 311 1 327 162 29 0 chr2 93241716 93241784 -157446070 - L1MB7 LINE L1 -1 6183 6114 1756 151 35 0 chr2 93241786 93242071 -157445783 + AluJo SINE Alu 1 295 -17 2082 121 3 0 chr2 93242080 93242378 -157445476 + AluY SINE Alu 5 303 -8 1617 253 55 29 chr2 93242383 93242501 -157445353 - L1MB7 LINE L1 -160 6024 5911 2097 122 13 0 chr2 93242501 93242805 -157445049 + AluSx SINE Alu 1 308 -4 1617 253 55 29 chr2 93242805 93243212 -157444642 - L1MB7 LINE L1 -273 5911 5485 2509 49 0 7 chr2 93243215 93243523 -157444331 - AluY SINE Alu -5 306 1 970 105 0 0 chr2 93243526 93243659 -157444195 - AluSq/x SINE Alu -180 133 1 237 164 16 0 chr2 93243669 93243730 -157444124 - L1MB7 LINE L1 -701 5479 5418 355 354 87 5 chr2 93243821 93244016 -157443838 - MIR SINE MIR -5 257 47 1149 149 0 0 chr2 93244435 93244610 -157443244 - AluSg/x SINE Alu -1 311 137 288 0 0 0 chr2 93244611 93244643 -157443211 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 2128 90 0 0 chr2 93244644 93244932 -157442922 - AluSc SINE Alu -21 288 1 194 337 0 11 chr2 93245582 93245674 -157442180 - L2 LINE L2 -222 3050 2960 1041 135 49 5 chr2 93245713 93245898 -157441956 + MER30 DNA MER1_type 4 196 -34 802 114 0 61 chr2 93247130 93247262 -157440592 - AluJb SINE Alu -183 129 6 267 93 0 0 chr2 93247281 93247324 -157440530 + (TG)n Simple_repeat Simple_repeat 2 44 0 627 240 140 14 chr2 93248360 93248518 -157439336 + MLT1C LTR MaLR 6 143 -324 1804 135 32 3 chr2 93248518 93248800 -157439054 + AluJo SINE Alu 17 306 -6 2365 80 3 6 chr2 93248800 93249112 -157438742 + AluSx SINE Alu 1 311 -1 627 240 140 14 chr2 93249112 93249244 -157438610 + MLT1C LTR MaLR 142 334 -133 253 282 77 0 chr2 93249650 93249728 -157438126 - L2 LINE L2 -18 3254 3171 225 65 0 0 chr2 93249841 93249872 -157437982 + (TG)n Simple_repeat Simple_repeat 1 31 0 1283 140 37 9 chr2 93250155 93250369 -157437485 - AluJo SINE Alu -26 286 67 221 247 112 11 chr2 93250710 93250799 -157437055 + MIR SINE MIR 58 155 -107 1297 88 0 16 chr2 93251734 93251766 -157436088 - AluSg/x SINE Alu 0 310 279 228 35 0 0 chr2 93251766 93251795 -157436059 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 1297 88 0 16 chr2 93251795 93251944 -157435910 - AluSg/x SINE Alu -31 279 132 2325 70 6 10 chr2 93251944 93252256 -157435598 - AluSx SINE Alu -1 311 1 1694 179 6 10 chr2 93252297 93252610 -157435244 - AluJb SINE Alu 0 312 1 192 161 0 0 chr2 93252958 93252989 -157434865 + MIR SINE MIR 115 145 -63 227 286 16 0 chr2 93253725 93253788 -157434066 + L2 LINE L2 3229 3292 -21 2436 63 3 25 chr2 93254216 93254532 -157433322 - AluSx SINE Alu -3 309 1 535 121 0 0 chr2 93255042 93255125 -157432729 - AluJ/FLAM SINE Alu -229 83 1 2167 100 20 0 chr2 93255185 93255484 -157432370 - AluSx SINE Alu -5 307 3 183 368 28 0 chr2 93256080 93256186 -157431668 - L2 LINE L2 -506 2808 2700 2210 109 3 0 chr2 93256333 93256637 -157431217 - AluSp SINE Alu -8 305 1 886 114 0 38 chr2 93256641 93256772 -157431082 - FLAM_C SINE Alu -7 126 1 2040 115 20 7 chr2 93256790 93257086 -157430768 + AluSg SINE Alu 1 300 -10 2003 123 0 17 chr2 93257369 93257670 -157430184 + AluSx SINE Alu 1 296 -16 2038 133 16 7 chr2 93257678 93257987 -157429867 + AluJb SINE Alu 1 312 0 1494 173 75 0 chr2 93259307 93259573 -157428281 + AluJo SINE Alu 1 286 -26 181 309 91 0 chr2 93259979 93260034 -157427820 - L2 LINE L2 -5 3308 3249 180 173 58 19 chr2 93261145 93261197 -157426657 - MIR3 SINE MIR -54 154 101 413 250 56 5 chr2 93261345 93261530 -157426324 - MLT1C LTR MaLR -15 452 277 343 233 0 11 chr2 93261560 93261650 -157426204 - MLT1C LTR MaLR -326 141 53 233 295 137 32 chr2 93261829 93261924 -157425930 - L2 LINE L2 -5 3308 3204 196 204 0 0 chr2 93262290 93262334 -157425520 - MIR SINE MIR -61 147 104 196 212 0 0 chr2 93262904 93262937 -157424917 + MIR SINE MIR 113 145 -117 1795 138 3 13 chr2 93263082 93263380 -157424474 + AluJo SINE Alu 9 303 -9 1796 115 3 35 chr2 93263380 93263665 -157424189 + AluSx SINE Alu 36 312 0 2284 72 23 7 chr2 93263667 93263973 -157423881 + AluY SINE Alu 1 311 0 843 239 54 57 chr2 93264062 93264138 -157423716 + MER7A DNA MER2_type 12 87 -2951 2345 29 11 0 chr2 93264138 93264418 -157423436 + AluY SINE Alu 12 294 -17 843 239 54 57 chr2 93264418 93264655 -157423199 + MER7A DNA MER2_type 87 322 -24 529 273 72 5 chr2 93264673 93264784 -157423070 + MLT1D LTR MaLR 262 364 -141 1691 157 20 10 chr2 93264784 93265078 -157422776 - AluJb SINE Alu -7 305 9 529 273 72 5 chr2 93265078 93265160 -157422694 + MLT1D LTR MaLR 364 468 -37 217 213 0 0 chr2 93266191 93266238 -157421616 + MIR SINE MIR 117 163 -99 2255 98 0 0 chr2 93267152 93267447 -157420407 + AluSx SINE Alu 1 295 -17 2347 80 0 0 chr2 93268029 93268330 -157419524 - AluSq SINE Alu -12 301 1 450 263 38 6 chr2 93269580 93269740 -157418114 + MER20 DNA MER1_type 1 165 -54 187 303 0 13 chr2 93270610 93270686 -157417168 + MIR SINE MIR 44 118 -90 259 68 0 0 chr2 93271016 93271060 -157416794 + FLAM_A SINE Alu 89 132 -1 1323 201 6 100 chr2 93271063 93271225 -157416629 + AluJb SINE Alu 2 119 -183 2290 109 0 0 chr2 93271225 93271527 -157416327 + AluSx SINE Alu 1 302 -10 1323 201 6 100 chr2 93271527 93271693 -157416161 + AluJb SINE Alu 119 299 -3 2479 61 6 0 chr2 93271693 93272004 -157415850 + AluSp SINE Alu 1 313 0 2107 117 3 3 chr2 93272491 93272799 -157415055 + AluSq SINE Alu 1 308 -5 1954 148 30 0 chr2 93272801 93273098 -157414756 + AluJo SINE Alu 1 306 -6 291 256 192 8 chr2 93273113 93273238 -157414616 - L2 LINE L2 0 3272 3125 2435 79 0 0 chr2 93273278 93273583 -157414271 + AluSx SINE Alu 1 305 -7 2475 63 3 0 chr2 93273594 93273897 -157413957 + AluY SINE Alu 1 304 -7 848 193 6 36 chr2 93274303 93274469 -157413385 - AluJo SINE Alu -151 161 1 633 200 0 57 chr2 93274469 93274609 -157413245 + AluJo/FRAM SINE Alu 162 293 -19 22 0 0 0 chr2 93274620 93274642 -157413212 + AT_rich Low_complexity Low_complexity 1 22 0 731 91 9 0 chr2 93274646 93274756 -157413098 - L1MA3 LINE L1 0 6305 6195 1793 164 0 0 chr2 93274770 93275050 -157412804 + AluJb SINE Alu 1 280 -32 376 216 0 112 chr2 93275062 93275187 -157412667 + L1MC4 LINE L1 6615 6725 -1317 329 308 0 69 chr2 93275110 93275202 -157412652 - L1MC4 LINE L1 -1323 6719 6637 * 2185 89 0 20 chr2 93275202 93275504 -157412350 - AluSx SINE Alu -12 300 5 329 308 0 69 chr2 93275504 93275541 -157412313 - L1MC4 LINE L1 -1405 6637 6599 2052 153 0 0 chr2 93275549 93275857 -157411997 + AluSg SINE Alu 2 309 -1 630 141 124 25 chr2 93275881 93276002 -157411852 + AluJo SINE Alu 2 134 -178 1835 98 124 0 chr2 93276021 93276287 -157411567 - AluSg SINE Alu 0 300 2 1588 132 4 51 chr2 93276714 93276846 -157411008 + AluJo SINE Alu 14 128 -184 2029 117 7 13 chr2 93276846 93277153 -157410701 + AluSx SINE Alu 2 306 -6 1588 132 4 51 chr2 93277153 93277293 -157410561 + AluJo SINE Alu 128 273 -39 180 111 0 0 chr2 93277449 93277476 -157410378 + (CGG)n Simple_repeat Simple_repeat 2 28 0 288 77 0 0 chr2 93277738 93277777 -157410077 + (TA)n Simple_repeat Simple_repeat 2 40 0 321 100 0 0 chr2 93278297 93278347 -157409507 + (A)n Simple_repeat Simple_repeat 1 50 0 2316 73 0 16 chr2 93278620 93278923 -157408931 - AluSq SINE Alu -9 304 7 27 29 0 0 chr2 93281110 93281144 -157406710 + AT_rich Low_complexity Low_complexity 1 34 0 240 149 0 0 chr2 93281246 93281293 -157406561 + (A)n Simple_repeat Simple_repeat 1 47 0 2259 76 10 3 chr2 93281626 93281929 -157405925 + AluSq SINE Alu 1 305 -8 682 269 53 0 chr2 93281930 93282138 -157405716 + MER20 DNA MER1_type 1 219 0 547 253 62 0 chr2 93282373 93282567 -157405287 + MER20 DNA MER1_type 1 206 -13 242 253 55 11 chr2 93282778 93282869 -157404985 + L2 LINE L2 2913 3007 -265 316 165 19 36 chr2 93283268 93283480 -157404374 + AluJo SINE Alu 1 278 -24 2150 121 0 0 chr2 93283480 93283786 -157404068 - AluSg SINE Alu -4 306 1 1646 138 0 23 chr2 93283788 93284048 -157403806 - AluSx SINE Alu -14 298 45 1991 135 0 0 chr2 93284093 93284381 -157403473 + AluSx SINE Alu 1 288 -24 185 32 0 65 chr2 93284382 93284390 -157403464 + (TTAA)n Simple_repeat Simple_repeat 4 11 -21 2261 66 3 3 chr2 93284390 93284677 -157403177 + AluY SINE Alu 1 287 -24 185 32 0 65 chr2 93284677 93284699 -157403155 + (TTAA)n Simple_repeat Simple_repeat 11 32 0 201 243 0 109 chr2 93285370 93285572 -157402282 + C-rich Low_complexity Low_complexity 1 180 0 1604 166 35 10 chr2 93286409 93286699 -157401155 + AluJo SINE Alu 1 297 -15 2170 93 6 19 chr2 93286703 93287015 -157400839 + AluSg SINE Alu 3 310 0 2102 99 0 40 chr2 93287017 93287339 -157400515 + AluSx SINE Alu 1 309 -3 809 164 8 15 chr2 93287348 93287482 -157400372 + AluJo SINE Alu 1 133 -169 623 174 70 9 chr2 93287482 93287592 -157400262 + AluJo SINE Alu 123 239 -73 1288 107 48 0 chr2 93287593 93287780 -157400074 - AluSc SINE Alu -113 196 1 22 35 0 0 chr2 93287781 93287810 -157400044 + AT_rich Low_complexity Low_complexity 1 29 0 2218 96 7 0 chr2 93287816 93288119 -157399735 + AluSx SINE Alu 1 305 -7 593 183 92 17 chr2 93288676 93288796 -157399058 + FLAM_C SINE Alu 1 129 -14 1619 79 150 0 chr2 93288824 93289077 -157398777 - AluSx SINE Alu -21 291 1 898 137 0 0 chr2 93289273 93289412 -157398442 + FLAM_C SINE Alu 1 139 -4 2033 116 0 13 chr2 93290684 93290985 -157396869 - AluSx SINE Alu -15 297 1 187 133 0 0 chr2 93290990 93291020 -157396834 - MIR SINE MIR -116 146 117 1597 126 12 8 chr2 93291829 93292084 -157395770 - AluSq SINE Alu -57 256 1 298 315 46 8 chr2 93292209 93292339 -157395515 - MER58A DNA MER1_type 0 147 13 1848 167 0 0 chr2 93292580 93292867 -157394987 + AluSx SINE Alu 5 291 -21 608 182 116 8 chr2 93292942 93293063 -157394791 - AluJo SINE Alu -176 136 3 2124 107 17 0 chr2 93293345 93293645 -157394209 - AluSx SINE Alu -7 305 1 405 291 100 22 chr2 93294230 93294501 -157393353 - MLT1C LTR MaLR -174 293 2 277 202 58 46 chr2 93296926 93297099 -157390755 + (GGCTG)n Simple_repeat Simple_repeat 4 178 0 196 115 0 39 chr2 93297207 93297259 -157390595 + (CGGGG)n Simple_repeat Simple_repeat 5 54 0 242 203 0 98 chr2 93297287 93297450 -157390404 + (CGGGG)n Simple_repeat Simple_repeat 5 151 0 420 267 47 97 chr2 93302209 93302371 -157385483 + L1MB3 LINE L1 5429 5575 -596 2295 93 0 0 chr2 93302371 93302682 -157385172 - AluSx SINE Alu -1 311 1 420 267 47 97 chr2 93302682 93302777 -157385077 + L1MB3 LINE L1 5575 5673 -498 1640 222 26 52 chr2 93302848 93302898 -157384956 + L1MB3 LINE L1 5689 5739 -444 2029 108 30 3 chr2 93302898 93303194 -157384660 + AluSx SINE Alu 1 304 -8 1640 222 26 52 chr2 93303194 93303300 -157384554 + L1MB3 LINE L1 5739 5846 -337 1621 164 20 10 chr2 93303300 93303592 -157384262 + AluJo SINE Alu 9 303 -9 1640 222 26 52 chr2 93303592 93303938 -157383916 + L1MB3 LINE L1 5846 6179 -4 198 308 67 19 chr2 93303966 93304070 -157383784 - MIR SINE MIR -72 190 82 351 0 0 0 chr2 93304400 93304439 -157383415 + (TG)n Simple_repeat Simple_repeat 1 39 0 2482 62 0 0 chr2 93305315 93305624 -157382230 - AluSg SINE Alu 0 310 2 180 135 0 0 chr2 93305969 93306006 -157381848 + (CTGGGG)n Simple_repeat Simple_repeat 1 37 0 40 59 0 0 chr2 93306080 93306148 -157381706 + GC_rich Low_complexity Low_complexity 1 68 0 21 36 0 0 chr2 93306179 93306207 -157381647 + GC_rich Low_complexity Low_complexity 1 28 0 1301 117 0 0 chr2 93307561 93307740 -157380114 + AluJo SINE Alu 1 179 -133 701 69 0 11 chr2 93307752 93307999 -157379855 + AluY SINE Alu 1 300 -11 209 375 65 35 chr2 93308150 93308489 -157379365 - L2 LINE L2 -86 3186 2838 1925 124 14 7 chr2 93309319 93309610 -157378244 + AluJb SINE Alu 1 293 -19 21 36 0 0 chr2 93311197 93311225 -157376629 + AT_rich Low_complexity Low_complexity 1 28 0 2183 90 3 16 chr2 93311232 93311543 -157376311 + AluSx SINE Alu 1 307 -5 790 136 0 8 chr2 93311546 93311664 -157376190 - AluJo/FLAM SINE Alu -195 117 1 2062 96 24 7 chr2 93311666 93311958 -157375896 - AluSg SINE Alu -13 297 1 901 156 57 21 chr2 93311962 93312154 -157375700 - AluSp SINE Alu -12 301 103 406 224 36 61 chr2 93312898 93313063 -157374791 + MER20 DNA MER1_type 1 161 -58 210 37 0 0 chr2 93313828 93313855 -157373999 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 22 35 0 0 chr2 93314310 93314339 -157373515 + GC_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chr2 93314701 93314721 -157373133 + (CAG)n Simple_repeat Simple_repeat 2 21 0 244 197 28 28 chr2 93317016 93317087 -157370767 + (CGGGG)n Simple_repeat Simple_repeat 1 71 0 210 71 0 0 chr2 93318431 93318459 -157369395 + (CGGGGG)n Simple_repeat Simple_repeat 4 31 0 450 190 175 0 chr2 93320763 93320900 -157366954 + MER20 DNA MER1_type 1 161 -58 186 323 52 52 chr2 93322126 93322222 -157365632 - MIR SINE MIR -107 155 60 2102 119 0 7 chr2 93324218 93324521 -157363333 + AluSx SINE Alu 1 301 -11 188 276 52 35 chr2 93325658 93325716 -157362138 + MIR SINE MIR 66 124 -84 39 38 0 0 chr2 93326431 93326484 -157361370 + GC_rich Low_complexity Low_complexity 1 53 0 1009 0 0 0 chr2 93327036 93327143 -157360711 + U6 snRNA snRNA 1 107 0 2064 109 10 0 chr2 93327403 93327705 -157360149 - AluSx SINE Alu -4 308 4 2178 102 0 7 chr2 93327716 93328019 -157359835 - AluSg1 SINE Alu -8 301 1 934 213 0 21 chr2 93328025 93328213 -157359641 + AluJo SINE Alu 120 303 -9 1144 227 4 4 chr2 93328248 93328495 -157359359 - MER58 DNA MER1_type -2155 265 19 483 214 8 0 chr2 93328504 93328635 -157359219 - Charlie5 DNA MER1_type 0 2620 2489 2024 141 0 3 chr2 93328638 93328936 -157358918 + AluJo SINE Alu 1 297 -15 2406 50 3 3 chr2 93328938 93329240 -157358614 + AluY SINE Alu 1 302 -9 343 287 32 38 chr2 93329251 93329408 -157358446 - Charlie5 DNA MER1_type -190 2422 2267 1797 126 60 0 chr2 93329412 93329681 -157358173 + AluJo SINE Alu 1 285 -27 290 286 11 0 chr2 93329681 93329772 -157358082 + (TATATG)n Simple_repeat Simple_repeat 5 96 0 1215 131 0 6 chr2 93329829 93330005 -157357849 + AluSx SINE Alu 3 177 -135 413 262 20 27 chr2 93330079 93330111 -157357743 - MER3 DNA MER1_type 6 168 137 2313 81 10 0 chr2 93330111 93330418 -157357436 + AluY SINE Alu 2 311 0 413 262 20 27 chr2 93330418 93330534 -157357320 - MER3 DNA MER1_type -25 137 21 942 91 0 0 chr2 93330574 93330695 -157357159 + AluSq/x SINE Alu 1 121 -192 495 0 0 0 chr2 93330695 93330750 -157357104 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 23 0 0 0 chr2 93331064 93331087 -157356767 + AT_rich Low_complexity Low_complexity 1 23 0 2268 92 0 10 chr2 93331091 93331395 -157356459 - AluSx SINE Alu 0 312 12 857 201 0 35 chr2 93331412 93331581 -157356273 - FRAM SINE Alu -2 164 2 279 292 11 11 chr2 93331594 93331683 -157356171 + L2 LINE L2 2976 3064 -208 216 111 0 0 chr2 93332123 93332159 -157355695 + (TCCCG)n Simple_repeat Simple_repeat 1 36 0 843 129 0 8 chr2 93332907 93333039 -157354815 + FLAM_C SINE Alu 1 131 -2 200 338 0 0 chr2 93333630 93333707 -157354147 - MIR SINE MIR -138 124 48 215 172 17 35 chr2 93334207 93334265 -157353589 + G-rich Low_complexity Low_complexity 4 60 0 437 350 25 15 chr2 93535577 93535774 -157152080 - MIR SINE MIR 0 262 64 2450 68 0 0 chr2 93535908 93536217 -157151637 + AluY SINE Alu 1 309 -2 1311 267 32 24 chr2 93537899 93538393 -157149461 + L1MC4a LINE L1 7301 7798 -10 233 268 0 9 chr2 93539002 93539114 -157148740 + (CATA)n Simple_repeat Simple_repeat 4 114 0 197 257 143 0 chr2 93539186 93539256 -157148598 - MIR SINE MIR -119 143 64 1050 254 85 0 chr2 93539277 93539607 -157148247 + MER47A DNA MER2_type 9 366 0 186 43 0 0 chr2 93539654 93539677 -157148177 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 1171 209 106 0 chr2 93540970 93541253 -157146601 - L1MB3 LINE L1 -72 6111 5799 824 120 16 0 chr2 93541257 93541382 -157146472 + BC200 scRNA scRNA 14 140 -60 804 234 6 0 chr2 93541382 93541553 -157146301 - L1MB3 LINE L1 -353 5830 5659 405 324 101 58 chr2 93542118 93542151 -157145703 + L1M4 LINE L1 2604 2634 -3512 195 47 23 47 chr2 93542151 93542194 -157145660 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 405 324 101 58 chr2 93542194 93542420 -157145434 + L1M4 LINE L1 2634 2888 -3258 1919 141 0 3 chr2 93542420 93542718 -157145136 + AluSx SINE Alu 1 297 -15 405 324 101 58 chr2 93542718 93542855 -157144999 + L1M4 LINE L1 2888 3018 -3128 246 331 8 0 chr2 93542899 93543020 -157144834 + L1M4 LINE L1 2890 3011 -3135 324 254 96 79 chr2 93543067 93543244 -157144610 + L1M4 LINE L1 3099 3278 -2868 21 0 0 0 chr2 93543864 93543885 -157143969 + AT_rich Low_complexity Low_complexity 1 21 0 2030 79 0 8 chr2 93543885 93544151 -157143703 - L1PA8 LINE L1 -3 6169 5906 21 100 0 0 chr2 93544224 93544294 -157143560 + AT_rich Low_complexity Low_complexity 1 70 0 740 234 92 94 chr2 93544486 93545343 -157142511 + L1MDa LINE L1 1883 2830 -3891 1351 246 52 60 chr2 93545354 93545858 -157141996 + LTR53 LTR ERVL 20 519 0 1295 216 22 0 chr2 93545942 93546210 -157141644 + AluJo SINE Alu 1 274 -38 233 320 70 12 chr2 93546210 93546382 -157141472 + L1MDa LINE L1 2974 3155 -3385 207 129 0 0 chr2 93546395 93546426 -157141428 + SUBTEL_sa Satellite Satellite 102 132 -42 1672 177 180 18 chr2 93546855 93547526 -157140328 + TAR1 Satellite telomeric 1088 1867 -244 2682 120 84 6 chr2 93547547 93548013 -157139841 + HSREP522 Satellite telomeric 3 504 0 4914 219 66 12 chr2 93548013 93549308 -157138546 - L1 LINE L1 -1998 4148 2785 884 262 103 33 chr2 93549443 93549796 -157138058 + HSREP522 Satellite telomeric 1 377 -24 204 189 7 54 chr2 93550622 93550770 -157137084 + (CCCTG)n Simple_repeat Simple_repeat 1 141 0 249 186 10 93 chr2 93550778 93550971 -157136883 + (GCCTG)n Simple_repeat Simple_repeat 2 178 0 * 336 198 6 72 chr2 93550869 93551036 -157136818 + (CCCTG)n Simple_repeat Simple_repeat 1 156 0 190 143 41 0 chr2 93551132 93551181 -157136673 + (CCCTAG)n Simple_repeat Simple_repeat 2 52 0 274 194 0 92 chr2 93551219 93551415 -157136439 + (CCCTG)n Simple_repeat Simple_repeat 2 179 0 * 395 263 53 0 chr2 93551390 93551542 -157136312 + (CCCTAG)n Simple_repeat Simple_repeat 1 160 0 374 184 0 72 chr2 93551581 93551733 -157136121 + (CCCTG)n Simple_repeat Simple_repeat 1 141 0 275 183 0 49 chr2 93551814 93551896 -157135958 + (CCCTG)n Simple_repeat Simple_repeat 2 79 0 * 423 267 48 7 chr2 93551876 93552219 -157135635 + (CCCTAG)n Simple_repeat Simple_repeat 1 356 0 407 220 51 40 chr2 93552300 93552477 -157135377 + (CCCTAG)n Simple_repeat Simple_repeat 1 179 0 281 314 29 29 chr2 93552520 93552695 -157135159 + (CCCTAG)n Simple_repeat Simple_repeat 4 178 0 193 159 0 68 chr2 93552777 93552865 -157134989 + (CCCTG)n Simple_repeat Simple_repeat 1 82 0 344 286 54 6 chr2 93552874 93553042 -157134812 + (CCCTAG)n Simple_repeat Simple_repeat 3 178 0 289 260 44 36 chr2 93553104 93553406 -157134448 + (CCCTAG)n Simple_repeat Simple_repeat 1 304 0 488 257 47 0 chr2 93553419 93553590 -157134264 + (CCCTAG)n Simple_repeat Simple_repeat 2 180 0 208 163 0 54 chr2 93553595 93553687 -157134167 + (CCCTG)n Simple_repeat Simple_repeat 5 91 0 349 231 75 6 chr2 93553749 93553909 -157133945 + (CCCTAG)n Simple_repeat Simple_repeat 2 172 0 394 280 54 0 chr2 93554122 93554290 -157133564 + (CTAGGG)n Simple_repeat Simple_repeat 1 177 0 380 275 16 77 chr2 93554406 93554588 -157133266 - MIR SINE MIR 0 262 92 788 126 0 17 chr2 93554590 93554709 -157133145 + AluSx SINE Alu 17 133 -180 356 218 0 67 chr2 93554848 93555027 -157132827 + (CCCTG)n Simple_repeat Simple_repeat 1 167 0 244 225 6 82 chr2 93555038 93555220 -157132634 + (CCCTG)n Simple_repeat Simple_repeat 4 171 0 270 135 0 68 chr2 93555294 93555427 -157132427 + (CCCTG)n Simple_repeat Simple_repeat 1 124 0 337 173 0 81 chr2 93555560 93555868 -157131986 + (CCCTG)n Simple_repeat Simple_repeat 1 283 0 222 149 6 81 chr2 93555919 93556093 -157131761 + (CCCTG)n Simple_repeat Simple_repeat 1 161 0 1276 185 3 13 chr2 93557491 93557805 -157130049 - AluY SINE Alu 0 311 1 327 299 0 0 chr2 93558075 93558182 -157129672 + (CA)n Simple_repeat Simple_repeat 2 108 0 275 271 28 17 chr2 93558166 93558343 -157129511 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 234 229 21 36 chr2 93558386 93558526 -157129328 + (TA)n Simple_repeat Simple_repeat 1 138 0 23 0 0 0 chr2 93558526 93558549 -157129305 + AT_rich Low_complexity Low_complexity 1 23 0 388 275 7 0 chr2 93558868 93559006 -157128848 + (CA)n Simple_repeat Simple_repeat 2 140 0 414 288 0 6 chr2 93559147 93559310 -157128544 + (CA)n Simple_repeat Simple_repeat 2 163 0 2147 91 0 7 chr2 93559313 93559609 -157128245 + AluSx SINE Alu 1 294 -18 1174 119 0 0 chr2 93559609 93559777 -157128077 + AluSx SINE Alu 134 301 -11 293 326 6 6 chr2 93559789 93559961 -157127893 + (CA)n Simple_repeat Simple_repeat 1 172 0 260 188 0 12 chr2 93559977 93560062 -157127792 + (CA)n Simple_repeat Simple_repeat 1 84 0 266 0 0 29 chr2 93561115 93561150 -157126704 + (TTA)n Simple_repeat Simple_repeat 3 36 0 571 186 0 0 chr2 93561150 93561252 -157126602 - L1PA16 LINE L1 -25 6141 6040 2284 99 0 0 chr2 93561386 93561688 -157126166 + AluSx SINE Alu 1 302 -10 1405 181 2 9 chr2 93561797 93562234 -157125620 - L1PA16 LINE L1 -133 6033 5718 887 150 12 12 chr2 93562228 93562388 -157125466 - L1PA16 LINE L1 -245 5921 5762 * 941 158 0 6 chr2 93562388 93562546 -157125308 - L1PA16 LINE L1 -247 5919 5763 1708 143 0 67 chr2 93562549 93562786 -157125068 - L1PA16 LINE L1 -249 5917 5707 2011 105 7 0 chr2 93562786 93563063 -157124791 + AluSx SINE Alu 23 301 -11 1708 143 0 67 chr2 93563063 93563154 -157124700 - L1PA16 LINE L1 -459 5707 5611 1550 166 9 69 chr2 93563159 93563431 -157124423 - L1PA16 LINE L1 -22 6144 5894 3170 106 2 2 chr2 93563431 93563875 -157123979 + L1PA7 LINE L1 5708 6151 -3 1550 166 9 69 chr2 93563875 93563934 -157123920 - L1PA16 LINE L1 -272 5894 5833 219 69 0 0 chr2 93563934 93563963 -157123891 + (A)n Simple_repeat Simple_repeat 1 29 0 371 162 0 54 chr2 93563963 93564037 -157123817 - L1PA16 LINE L1 -323 5838 5769 232 56 0 0 chr2 93564037 93564073 -157123781 + L1PA12 LINE L1 5999 6034 -134 1876 153 0 0 chr2 93564077 93564365 -157123489 + AluSx SINE Alu 1 288 -24 183 42 0 0 chr2 93564426 93564450 -157123404 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1941 100 22 59 chr2 93564872 93565014 -157122840 + AluSg SINE Alu 1 147 -163 2190 93 0 22 chr2 93565014 93565325 -157122529 + AluY SINE Alu 1 304 -7 1941 100 22 59 chr2 93565325 93565502 -157122352 + AluSg SINE Alu 147 308 -2 639 192 0 0 chr2 93565586 93565690 -157122164 + FLAM_C SINE Alu 2 105 -38 3193 261 33 6 chr2 93565691 93566510 -157121344 - ERVL LTR ERVL -3750 2014 1174 358 148 20 0 chr2 93566513 93566614 -157121240 + (CCAA)n Simple_repeat Simple_repeat 1 103 0 896 238 0 0 chr2 93566616 93566803 -157121051 - ERVL LTR ERVL -4575 1189 1002 312 27 0 0 chr2 93566803 93566840 -157121014 + (TG)n Simple_repeat Simple_repeat 2 38 0 4821 176 22 29 chr2 93566852 93567780 -157120074 - MER49 LTR ERV1 -2 921 1 300 293 30 0 chr2 93567792 93567891 -157119963 - MLT2C1 LTR ERVL -59 338 237 356 274 29 0 chr2 93567925 93568027 -157119827 - MLT2C1 LTR ERVL -291 106 2 238 366 114 0 chr2 93568343 93568466 -157119388 - MIR SINE MIR -78 184 48 270 292 54 23 chr2 93569254 93569384 -157118470 + MIR SINE MIR 3 136 -126 1218 201 55 16 chr2 93569614 93569920 -157117934 + MLT1D LTR MaLR 206 505 0 23 0 0 0 chr2 93570159 93570182 -157117672 + AT_rich Low_complexity Low_complexity 1 23 0 188 292 101 0 chr2 93570992 93571081 -157116773 - L2 LINE L2 -215 3057 2960 355 250 75 44 chr2 93571623 93571783 -157116071 + MIR3 SINE MIR 3 167 -41 2121 119 0 3 chr2 93572562 93572872 -157114982 + AluSq SINE Alu 1 309 -4 816 269 15 20 chr2 93573790 93574116 -157113738 - MER34C LTR ERV1 -155 430 63 5008 37 5 2 chr2 93574857 93575448 -157112406 + L1PA5 LINE L1 5408 6000 -154 280 295 21 0 chr2 93576248 93576343 -157111511 - L2 LINE L2 -1 3312 3216 24 77 0 0 chr2 93577849 93577901 -157109953 + AT_rich Low_complexity Low_complexity 1 52 0 1713 163 10 26 chr2 93578363 93578669 -157109185 - AluSp SINE Alu -12 301 1 211 314 0 0 chr2 93578983 93579053 -157108801 - MIR SINE MIR -8 254 185 3496 174 3 14 chr2 93579367 93580026 -157107828 - L1MA5 LINE L1 -7 6293 5642 2769 205 28 24 chr2 93580028 93580739 -157107115 + L1 LINE L1 3884 4597 -1549 388 271 94 99 chr2 93581479 93582305 -157105549 - L1MEd LINE L1 -4876 1243 789 732 116 33 39 chr2 93582318 93582499 -157105355 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 498 129 65 29 chr2 93582471 93582641 -157105213 + (CATTT)n Simple_repeat Simple_repeat 3 178 0 * 412 261 91 101 chr2 93582642 93583296 -157104558 - L1MEd LINE L1 -4903 1216 795 400 272 98 72 chr2 93583277 93584138 -157103716 - L1MEd LINE L1 -4902 1227 790 * 275 136 80 32 chr2 93584183 93584308 -157103546 + (CATCT)n Simple_repeat Simple_repeat 5 135 0 32 64 0 13 chr2 93584398 93584439 -157103415 + AT_rich Low_complexity Low_complexity 1 41 -36 717 189 23 30 chr2 93584439 93584453 -157103401 - FLAM_C SINE Alu -171 131 118 1377 199 50 17 chr2 93584453 93584754 -157103100 - AluJo SINE Alu -1 311 1 342 0 0 0 chr2 93584754 93584792 -157103062 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 717 189 23 30 chr2 93584792 93584908 -157102946 - FLAM_C SINE Alu -182 120 1 32 64 0 13 chr2 93584908 93584944 -157102910 + AT_rich Low_complexity Low_complexity 41 77 0 432 312 47 8 chr2 93585782 93586141 -157101713 + L1M4 LINE L1 1194 1566 -4976 1287 122 13 22 chr2 93586145 93586374 -157101480 - L1PA16 LINE L1 -195 5971 5745 1093 184 0 5 chr2 93586374 93586571 -157101283 + L1PA16 LINE L1 5962 6166 0 560 313 42 15 chr2 93586602 93587059 -157100795 + L1M4 LINE L1 1755 2223 -4602 314 298 105 35 chr2 93587069 93587327 -157100527 + L1ME3 LINE L1 5878 6153 -9 405 0 0 0 chr2 93587328 93587373 -157100481 + (TAAAA)n Simple_repeat Simple_repeat 5 49 0 13627 196 27 7 chr2 93589469 93592255 -157095599 + MER70A-int LTR ERVL 2182 5023 0 1806 241 24 24 chr2 93592261 93592729 -157095125 + MER70A LTR ERVL 3 470 -2 1050 182 16 20 chr2 93592729 93592976 -157094878 + L1MB3 LINE L1 5937 6182 -1 470 256 0 23 chr2 93593099 93593232 -157094622 - FLAM_C SINE Alu -3 130 1 1522 270 51 15 chr2 93593904 93594496 -157093358 + L1ME1 LINE L1 5508 6120 -46 254 339 71 16 chr2 93594608 93594735 -157093119 + MIR SINE MIR 36 169 -93 25 0 0 0 chr2 93594815 93594840 -157093014 + AT_rich Low_complexity Low_complexity 1 25 0 253 333 27 7 chr2 93595018 93595168 -157092686 - L1 LINE L1 -2399 4141 3989 453 19 0 0 chr2 93596368 93596422 -157091432 + (TA)n Simple_repeat Simple_repeat 2 55 0 324 0 0 0 chr2 93596423 93596459 -157091395 + (CA)n Simple_repeat Simple_repeat 1 36 0 3586 133 16 7 chr2 93596560 93597167 -157090687 + L1PA15 LINE L1 5276 5888 -277 258 262 139 32 chr2 93597621 93597808 -157090046 - L1MC4 LINE L1 -151 7891 7685 317 161 37 49 chr2 93598776 93598857 -157088997 - LTR33A LTR ERVL 0 523 444 21 0 0 0 chr2 93599823 93599844 -157088010 + AT_rich Low_complexity Low_complexity 1 21 0 227 229 38 67 chr2 93600162 93600267 -157087587 + MLT1H LTR MaLR 420 521 -28 1307 197 3 35 chr2 93600675 93600913 -157086941 + LTR58 LTR ERV1 1 230 -449 1944 169 0 0 chr2 93600913 93601215 -157086639 - AluSx SINE Alu -10 302 1 1307 197 3 35 chr2 93601215 93601266 -157086588 + LTR58 LTR ERV1 230 281 -398 1969 198 24 33 chr2 93601266 93601696 -157086158 + LTR58 LTR ERV1 229 656 -23 1943 152 7 0 chr2 93601696 93602046 -157085808 + AluSq SINE Alu 1 313 0 1969 198 24 33 chr2 93602046 93602069 -157085785 + LTR58 LTR ERV1 656 678 -1 491 351 48 13 chr2 93602641 93602869 -157084985 + MIR SINE MIR 27 262 0 7030 128 11 0 chr2 93604723 93605890 -157081964 + L1P LINE L1 1862 3041 -3105 3259 68 0 9 chr2 93605892 93606318 -157081536 + L1PA8 LINE L1 5751 6172 0 1176 272 44 56 chr2 93607179 93607719 -157080135 + MLT1E LTR MaLR 60 593 0 228 260 31 31 chr2 93609070 93609099 -157078755 + MLT1H LTR MaLR 454 482 -67 788 261 90 22 chr2 93609099 93609421 -157078433 - MER2 DNA MER2_type 0 344 1 228 260 31 31 chr2 93609421 93609487 -157078367 + MLT1H LTR MaLR 481 549 0 180 0 0 0 chr2 93609848 93609868 -157077986 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 1676 248 88 29 chr2 93611168 93612497 -157075357 - L1MDa LINE L1 -3267 3273 1865 1152 235 112 26 chr2 93612604 93613004 -157074850 - MLT1D LTR MaLR 0 505 58 3842 140 29 6 chr2 93613004 93613634 -157074220 - LTR9B LTR ERV1 0 644 1 1152 235 112 26 chr2 93613634 93613696 -157074158 - MLT1D LTR MaLR -447 58 3 4533 161 40 19 chr2 93613911 93614762 -157073092 - MER4D LTR ERV1 0 872 4 400 306 87 10 chr2 93614980 93615186 -157072668 - LTR16C LTR ERVL -84 407 186 509 285 61 66 chr2 93615186 93615582 -157072272 - MSTD LTR MaLR -2 394 1 1094 206 48 6 chr2 93615757 93616098 -157071756 + Tigger2a DNA MER2_type 1 444 0 265 284 93 53 chr2 93616156 93616445 -157071409 + MER34 LTR ERV1 1 374 -411 609 206 58 42 chr2 93616475 93616664 -157071190 + LTR48B LTR ERV1 449 640 -4 28 0 0 0 chr2 93617377 93617405 -157070449 + AT_rich Low_complexity Low_complexity 1 28 0 270 294 20 0 chr2 93617472 93617574 -157070280 - L1MC4 LINE L1 -151 7891 7788 1473 221 52 20 chr2 93618731 93619065 -157068789 - MER65C LTR ERV1 -4 457 104 2771 153 29 2 chr2 93619065 93619549 -157068305 - LOR1a LTR ERV1 0 497 1 1473 221 52 20 chr2 93619549 93619657 -157068197 - MER65C LTR ERV1 -357 104 1 30 83 0 0 chr2 93620655 93620727 -157067127 + AT_rich Low_complexity Low_complexity 1 72 0 2039 107 3 17 chr2 93622185 93622483 -157065371 - AluSc SINE Alu -15 294 1 1199 228 108 38 chr2 93625849 93626254 -157061600 - MLT1D LTR MaLR 0 505 61 3802 147 17 11 chr2 93626254 93626892 -157060962 - LTR9B LTR ERV1 0 644 3 1199 228 108 38 chr2 93626892 93626956 -157060898 - MLT1D LTR MaLR -444 61 3 535 247 76 22 chr2 93627307 93627530 -157060324 + LTR48B LTR ERV1 406 640 -4 26 0 0 0 chr2 93628234 93628260 -157059594 + AT_rich Low_complexity Low_complexity 1 26 0 1495 211 54 31 chr2 93629585 93629922 -157057932 - MER65C LTR ERV1 -4 457 106 2797 144 38 4 chr2 93629922 93630401 -157057453 - LOR1a LTR ERV1 -2 495 1 1495 211 54 31 chr2 93630401 93630508 -157057346 - MER65C LTR ERV1 -355 106 3 25 0 0 0 chr2 93630888 93630913 -157056941 + AT_rich Low_complexity Low_complexity 1 25 0 213 258 21 11 chr2 93631651 93631744 -157056110 + (TA)n Simple_repeat Simple_repeat 1 94 0 2108 218 57 23 chr2 93634979 93635775 -157052079 + L1MB3 LINE L1 5099 5921 -262 1790 230 120 0 chr2 93635783 93636201 -157051653 + MER70A LTR ERVL 1 468 -4 981 182 29 0 chr2 93636205 93636375 -157051479 + MER70A-int LTR ERVL 1 175 -4848 3662 226 55 17 chr2 93636421 93637505 -157050349 + LTR48B-int LTR ERV1 30 1178 -5498 2135 148 0 0 chr2 93637513 93637824 -157050030 + AluSx SINE Alu 1 311 -1 386 241 36 18 chr2 93637840 93637987 -157049867 + MER66A-int LTR ERV1 2421 3588 -3010 960 192 12 0 chr2 93637987 93638154 -157049700 + AluSx SINE Alu 28 196 -116 873 155 0 34 chr2 93638153 93638333 -157049521 + AluSg/x SINE Alu 148 322 0 * 1004 234 61 27 chr2 93638333 93638628 -157049226 + MER66A-int LTR ERV1 4637 4941 -1735 * 1582 161 39 14 chr2 93638617 93638897 -157048957 + MER66A-int LTR ERV1 6390 6676 0 1450 213 160 11 chr2 93638897 93639278 -157048576 + MER66A LTR ERV1 1 438 -40 267 313 18 0 chr2 93639288 93639400 -157048454 - L1M4 LINE L1 -2763 3383 3270 1750 123 42 4 chr2 93639401 93639662 -157048192 - AluY SINE Alu -3 308 38 2072 156 0 0 chr2 93639994 93640301 -157047553 + AluSx SINE Alu 1 307 -5 1238 193 80 22 chr2 93640478 93640752 -157047102 + MSTD LTR MaLR 107 396 0 1144 271 63 36 chr2 93640758 93641234 -157046620 - L1MC4a LINE L1 -875 6933 6445 495 0 0 0 chr2 93642135 93642190 -157045664 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 3102 223 31 0 chr2 93642884 93643571 -157044283 - L1P LINE L1 -3713 2433 1726 27 0 0 0 chr2 93643602 93643629 -157044225 + AT_rich Low_complexity Low_complexity 1 27 0 529 224 0 48 chr2 93645286 93645411 -157042443 + FLAM_C SINE Alu 2 120 -23 279 0 0 0 chr2 93645411 93645442 -157042412 + (CA)n Simple_repeat Simple_repeat 2 32 0 536 266 39 22 chr2 93645550 93645779 -157042075 - L1MB3 LINE L1 -1 6182 5950 2141 238 21 21 chr2 93645792 93646262 -157041592 - MER70A LTR ERVL -2 470 1 1110 170 26 21 chr2 93646270 93646623 -157041231 - MER70A-int LTR ERVL -14 5009 4629 * 5226 172 15 1 chr2 93646618 93647508 -157040346 - HERVL LTR ERVL -2150 2873 1972 288 314 41 29 chr2 93647506 93647678 -157040176 - HERVL LTR ERVL -1340 4314 4141 * 26 98 0 0 chr2 93648508 93648590 -157039264 + AT_rich Low_complexity Low_complexity 1 82 0 460 220 73 9 chr2 93649570 93649678 -157038176 + MER65C LTR ERV1 1 115 -346 3095 131 31 0 chr2 93649678 93649793 -157038061 + LOR1a LTR ERV1 1 111 -386 279 0 0 0 chr2 93649793 93649824 -157038030 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3095 131 31 0 chr2 93649824 93650190 -157037664 + LOR1a LTR ERV1 111 497 0 1392 223 42 6 chr2 93650190 93650523 -157037331 + MER65C LTR ERV1 112 456 -5 27 0 0 0 chr2 93651848 93651875 -157035979 + AT_rich Low_complexity Low_complexity 1 27 0 629 256 113 52 chr2 93652591 93653024 -157034830 - LTR48B LTR ERV1 -4 640 156 348 243 14 0 chr2 93653163 93653237 -157034617 - Tigger2a DNA MER2_type 0 444 370 506 215 23 31 chr2 93653276 93653406 -157034448 + MLT1A1 LTR MaLR 235 363 -2 375 301 97 19 chr2 93653406 93653612 -157034242 + LTR16C LTR ERVL 186 407 -84 4784 158 55 18 chr2 93653833 93654671 -157033183 + MER4D LTR ERV1 4 872 0 273 161 0 54 chr2 93654888 93654944 -157032910 + MLT1D LTR MaLR 4 56 -449 1475 107 47 13 chr2 93654948 93655181 -157032673 + LTR9B LTR ERV1 1 241 -403 1514 219 93 19 chr2 93655379 93655487 -157032367 + MER65C LTR ERV1 1 100 -361 3263 125 35 0 chr2 93655487 93655967 -157031887 + LOR1a LTR ERV1 1 497 0 1514 219 93 19 chr2 93655967 93656287 -157031567 + MER65C LTR ERV1 100 461 0 287 304 20 0 chr2 93657444 93657546 -157030308 + L1MC4 LINE L1 7788 7891 -151 664 209 128 66 chr2 93658020 93658293 -157029561 - LTR48B LTR ERV1 -4 640 406 1206 195 38 4 chr2 93658593 93658854 -157029000 - Tigger2a DNA MER2_type 0 444 175 301 214 86 0 chr2 93658865 93658935 -157028919 - Tigger2a DNA MER2_type -358 76 1 342 306 87 38 chr2 93659053 93659109 -157028745 + LTR16C LTR ERVL 134 186 -305 678 308 59 49 chr2 93659109 93659499 -157028355 + MSTD LTR MaLR 1 394 -2 342 306 87 38 chr2 93659499 93659625 -157028229 + LTR16C LTR ERVL 186 325 -166 4886 158 53 20 chr2 93659928 93660769 -157027085 + MER4D LTR ERV1 4 872 0 31818 180 14 16 chr2 93660775 93661610 -157026244 + HERVH LTR ERV1 1793 2628 -5085 3760 72 45 2 chr2 93661610 93662080 -157025774 + LTR2B LTR ERV1 1 490 0 31818 180 14 16 chr2 93662080 93667175 -157020679 + HERVH LTR ERV1 2628 7713 0 2331 160 40 27 chr2 93667175 93667619 -157020235 + LTR7 LTR ERV1 1 450 0 406 192 192 0 chr2 93667624 93667744 -157020110 + MLT1D LTR MaLR 363 505 0 635 269 3 1 chr2 93667835 93668016 -157019838 + L1M4c LINE L1 1575 1829 -4553 1718 242 90 25 chr2 93668088 93669178 -157018676 + L1M4c LINE L1 1967 3123 -3259 547 266 10 15 chr2 93669157 93669356 -157018498 - L1M4 LINE L1 -2923 3223 3026 * 231 308 124 65 chr2 93670017 93670475 -157017379 + L2 LINE L2 2829 3313 0 1005 233 87 60 chr2 93670887 93671222 -157016632 + MER2 DNA MER2_type 1 344 0 256 210 91 105 chr2 93672418 93672561 -157015293 + MLT1H LTR MaLR 128 268 -281 1291 280 51 52 chr2 93672629 93673182 -157014672 - MLT1E LTR MaLR -6 587 36 7789 67 3 10 chr2 93673681 93675430 -157012424 - L1PA6 LINE L1 -5 6149 4396 237 339 27 27 chr2 93675453 93675565 -157012289 - MIR SINE MIR -115 147 36 1507 290 52 17 chr2 93675693 93676273 -157011581 - L1ME1 LINE L1 -59 6107 5508 499 273 0 23 chr2 93676935 93677063 -157010791 + FLAM_C SINE Alu 3 127 -16 1147 194 12 20 chr2 93677189 93677436 -157010418 - L1MB3 LINE L1 -1 6182 5938 1944 237 24 26 chr2 93677436 93677901 -157009953 - MER70A LTR ERVL -1 471 8 17033 197 26 15 chr2 93677913 93681223 -157006631 - MER70A-int LTR ERVL 0 5023 1679 2407 132 103 54 chr2 93682072 93683168 -157004686 + SATR1 Satellite Satellite 1 1150 0 2315 143 115 18 chr2 93683194 93683998 -157003856 + SATR1 Satellite Satellite 1 882 0 2269 180 122 15 chr2 93684026 93684852 -157003002 + SATR1 Satellite Satellite 1 914 -140 1305 171 19 56 chr2 93684849 93685118 -157002736 + THE1B LTR MaLR 106 364 0 * 11863 111 6 4 chr2 93685118 93686694 -157001160 + THE1B-int LTR MaLR 1 1579 -1 2187 123 69 29 chr2 93686695 93687045 -157000809 + THE1B LTR MaLR 1 364 0 257 191 15 0 chr2 93687057 93687125 -157000729 - L1MEc LINE L1 -3698 2946 2878 230 289 93 20 chr2 93687146 93687350 -157000504 - L1MEc LINE L1 -3965 2860 2642 405 269 59 59 chr2 93689846 93690084 -156997770 - L1ME3 LINE L1 -2 6160 5923 706 347 52 8 chr2 93690124 93690600 -156997254 - L1MEc LINE L1 -4576 2070 1574 960 210 30 5 chr2 93690601 93690801 -156997053 - L1PA16 LINE L1 0 6166 5962 1380 133 5 0 chr2 93690807 93691018 -156996836 + L1PA16 LINE L1 5760 5971 -195 670 274 55 25 chr2 93691021 93691383 -156996471 - L1MEc LINE L1 -4976 1566 1194 353 256 98 60 chr2 93692737 93692952 -156994902 - L1ME3 LINE L1 -28 6134 5912 1177 302 58 22 chr2 93692988 93693920 -156993934 - L1M4c LINE L1 -4571 2075 1112 1320 199 13 39 chr2 93694056 93694368 -156993486 - AluJb SINE Alu -8 304 1 1544 209 3 3 chr2 93694433 93694739 -156993115 + MER47A DNA MER2_type 3 308 -58 473 304 36 10 chr2 93696906 93697100 -156990754 + MIR SINE MIR 64 262 0 1135 128 12 0 chr2 93698401 93698565 -156989289 - AluSg/x SINE Alu -14 298 133 6508 217 54 31 chr2 93698576 93699027 -156988827 - MER66A-int LTR ERV1 -5058 1618 1179 1664 158 16 48 chr2 93699027 93699343 -156988511 - AluSx SINE Alu 0 312 7 6508 217 54 31 chr2 93699343 93700445 -156987409 - MER66A-int LTR ERV1 -5497 1179 30 1495 189 23 104 chr2 93700537 93700977 -156986877 - MER66A LTR ERV1 -46 432 29 215 299 45 0 chr2 93701542 93701609 -156986245 - MIR SINE MIR -90 118 49 1591 264 77 22 chr2 93701737 93702325 -156985529 - L1ME1 LINE L1 -28 6138 5519 619 204 0 0 chr2 93702994 93703102 -156984752 + FLAM_C SINE Alu 2 109 -34 333 0 0 0 chr2 93703110 93703147 -156984707 + (CA)n Simple_repeat Simple_repeat 2 38 0 765 231 31 13 chr2 93703255 93703484 -156984370 - L1MB3 LINE L1 -1 6182 5950 2386 213 21 21 chr2 93703497 93703967 -156983887 - MER70A LTR ERVL -2 470 1 2127 178 10 23 chr2 93703971 93704370 -156983484 - MER70A-int LTR ERVL -1 5022 4629 * 5930 197 14 1 chr2 93704365 93705455 -156982399 - HERVL LTR ERVL -2150 2873 1770 225 0 0 0 chr2 93705455 93705480 -156982374 + (A)n Simple_repeat Simple_repeat 1 25 0 240 310 35 14 chr2 93705688 93705830 -156982024 - LTR67 LTR ERVL -54 503 359 420 310 43 27 chr2 93707200 93707387 -156980467 - HERVL LTR ERVL -1309 4345 4156 1867 209 50 25 chr2 93709205 93709312 -156978542 + MER65C LTR ERV1 3 106 -355 2922 153 31 8 chr2 93709312 93709796 -156978058 + LOR1a LTR ERV1 1 495 -2 1867 209 50 25 chr2 93709796 93710132 -156977722 + MER65C LTR ERV1 106 457 -4 29 0 0 0 chr2 93711455 93711484 -156976370 + AT_rich Low_complexity Low_complexity 1 29 0 758 247 103 41 chr2 93712199 93712620 -156975234 - LTR48B LTR ERV1 -10 634 160 260 344 0 0 chr2 93712617 93712707 -156975147 - MER34 LTR ERV1 -452 90 1 * 1243 199 38 0 chr2 93712765 93713026 -156974828 - Tigger2a DNA MER2_type 0 444 174 324 162 108 14 chr2 93713030 93713104 -156974750 - Tigger2a DNA MER2_type -353 81 1 848 195 56 136 chr2 93713279 93713674 -156974180 + MLT1A1 LTR MaLR 1 430 -2 475 306 87 10 chr2 93713674 93713880 -156973974 + LTR16C LTR ERVL 186 407 -84 4798 166 54 16 chr2 93714098 93714935 -156972919 + MER4D LTR ERV1 4 872 0 568 224 119 57 chr2 93715152 93715211 -156972643 + MLT1D LTR MaLR 6 60 -445 3842 151 39 6 chr2 93715211 93715835 -156972019 + LTR9B LTR ERV1 1 644 0 568 224 119 57 chr2 93715835 93715985 -156971869 + MLT1D LTR MaLR 60 228 -277 1070 218 81 37 chr2 93716124 93716782 -156971072 - L1MDa LINE L1 -3634 2906 2222 383 242 117 72 chr2 93716787 93717010 -156970844 + MER2 DNA MER2_type 112 344 -1 232 215 96 111 chr2 93718205 93718340 -156969514 + MLT1H LTR MaLR 136 268 -281 1328 278 40 49 chr2 93718424 93718950 -156968904 - MLT1E LTR MaLR -22 571 51 2098 125 10 0 chr2 93719091 93719386 -156968468 - AluSx SINE Alu -14 298 1 500 359 45 5 chr2 93720590 93720810 -156967044 - MIR SINE MIR -7 255 27 2192 125 3 0 chr2 93721411 93721707 -156966147 - AluSq SINE Alu -16 297 1 2086 212 26 7 chr2 93721707 93722137 -156965717 - LTR58 LTR ERV1 -13 666 229 348 157 0 0 chr2 93722137 93722188 -156965666 - LTR58 LTR ERV1 -398 281 231 1974 143 7 0 chr2 93722188 93722482 -156965372 + AluSx SINE Alu 1 296 -16 1621 202 41 0 chr2 93722490 93722807 -156965047 - HERVL LTR ERVL -2924 2099 1770 544 321 80 29 chr2 93724377 93724754 -156963100 - HERVL LTR ERVL -1118 4536 4141 30 45 0 0 chr2 93725413 93725457 -156962397 + AT_rich Low_complexity Low_complexity 1 44 0 22 70 0 0 chr2 93725586 93725629 -156962225 + AT_rich Low_complexity Low_complexity 1 43 0 1709 230 47 18 chr2 93726656 93726764 -156961090 + MER65C LTR ERV1 1 104 -357 3151 138 38 0 chr2 93726764 93727243 -156960611 + LOR1a LTR ERV1 1 497 0 1709 230 47 18 chr2 93727243 93727578 -156960276 + MER65C LTR ERV1 104 457 -4 27 0 0 0 chr2 93728904 93728931 -156958923 + AT_rich Low_complexity Low_complexity 1 27 0 663 256 67 14 chr2 93729646 93729869 -156957985 - LTR48B LTR ERV1 -4 640 406 315 333 8 23 chr2 93730029 93730161 -156957693 - MER34 LTR ERV1 -412 130 1 1360 187 34 0 chr2 93730219 93730481 -156957373 - Tigger2a DNA MER2_type 0 444 174 344 207 73 12 chr2 93730479 93730561 -156957293 - Tigger2a DNA MER2_type -347 87 1 * 836 220 49 119 chr2 93730738 93731126 -156956728 + MLT1A1 LTR MaLR 4 430 -2 334 307 40 0 chr2 93731126 93731227 -156956627 + LTR16C LTR ERVL 186 290 -201 4878 168 39 18 chr2 93731546 93732398 -156955456 + MER4D LTR ERV1 3 872 0 1528 219 113 24 chr2 93732609 93732671 -156955183 + MLT1D LTR MaLR 3 58 -447 4112 152 34 2 chr2 93732671 93733295 -156954559 + LTR9B LTR ERV1 1 644 0 1528 219 113 24 chr2 93733295 93733694 -156954160 + MLT1D LTR MaLR 58 505 0 1180 263 13 74 chr2 93736624 93737015 -156950839 - MLT1A2 LTR MaLR -7 367 1 536 290 23 6 chr2 93737788 93737991 -156949863 + MER3 DNA MER1_type 1 209 0 756 350 26 27 chr2 93741851 93742528 -156945326 + HERVL LTR ERVL 2586 3260 -1901 321 404 19 6 chr2 93744523 93744684 -156943170 + MER5B DNA MER1_type 12 174 -4 202 284 15 15 chr2 93744709 93744776 -156943078 + MER5A DNA MER1_type 16 82 -107 825 244 71 19 chr2 93744782 93745217 -156942637 + L1MDa LINE L1 1031 1473 -5070 730 218 87 22 chr2 93745228 93745457 -156942397 + L1MDa LINE L1 1652 1895 -4645 3837 195 38 4 chr2 93745469 93746177 -156941677 + L1P4 LINE L1 1 732 -6055 16940 182 29 12 chr2 93746188 93749434 -156938420 + L1P4 LINE L1 959 4150 -2669 2097 133 0 0 chr2 93749434 93749727 -156938127 + AluSx SINE Alu 1 293 -19 357 24 0 0 chr2 93749727 93749769 -156938085 + (TA)n Simple_repeat Simple_repeat 2 43 0 16940 182 29 12 chr2 93749769 93750367 -156937487 + L1P4 LINE L1 4150 4737 -2082 1949 172 0 0 chr2 93750367 93750664 -156937190 - AluSx SINE Alu -15 297 1 16940 182 29 12 chr2 93750664 93752229 -156935625 + L1P4 LINE L1 4737 6442 -377 30 0 0 0 chr2 93752755 93752785 -156935069 + AT_rich Low_complexity Low_complexity 1 30 0 314 123 105 0 chr2 93753643 93753700 -156934154 - AluS SINE Alu -239 64 2 1951 147 20 0 chr2 93753701 93754000 -156933854 - AluSx SINE Alu -7 305 1 443 299 53 39 chr2 93754061 93754280 -156933574 - L1M4c LINE L1 -1891 4753 4524 249 57 0 0 chr2 93754280 93754315 -156933539 + (TG)n Simple_repeat Simple_repeat 2 36 0 443 299 53 39 chr2 93754315 93754510 -156933344 - L1M4c LINE L1 -2120 4524 4333 336 284 156 16 chr2 93754489 93754937 -156932917 - L1M4c LINE L1 -3526 3118 2608 * 447 290 48 27 chr2 93755222 93755408 -156932446 - L1M4c LINE L1 -4579 2246 2057 22 0 0 0 chr2 93756998 93757020 -156930834 + AT_rich Low_complexity Low_complexity 1 22 0 343 273 11 0 chr2 93759020 93759108 -156928746 - L1MC4 LINE L1 -1339 6703 6615 23 79 0 13 chr2 93759108 93759148 -156928706 + AT_rich Low_complexity Low_complexity 1 41 -34 2009 128 3 17 chr2 93759148 93759438 -156928416 - AluSx SINE Alu -26 286 1 23 79 0 13 chr2 93759438 93759473 -156928381 + AT_rich Low_complexity Low_complexity 41 75 0 1515 62 0 16 chr2 93759602 93759796 -156928058 - AluY SINE Alu -13 298 108 207 0 0 0 chr2 93760427 93760450 -156927404 + (T)n Simple_repeat Simple_repeat 1 23 0 622 188 68 104 chr2 93760471 93760721 -156927133 + MLT1D LTR MaLR 265 505 0 5882 184 37 6 chr2 93761034 93762907 -156924947 + L1P4 LINE L1 3872 5802 -363 2020 109 0 0 chr2 93763779 93764045 -156923809 - AluSg SINE Alu 0 310 45 1731 135 180 26 chr2 93765375 93765791 -156922063 + LTR12 LTR ERV1 1 480 -234 539 197 174 0 chr2 93766283 93766415 -156921439 + L1MA7 LINE L1 5931 6085 -206 1515 217 47 63 chr2 93766457 93766964 -156920890 - LTR26B LTR ERV1 -30 501 3 778 167 62 0 chr2 93766966 93767158 -156920696 + L1MA7 LINE L1 6088 6291 0 1990 257 77 44 chr2 93767228 93768336 -156919518 - L1MC4a LINE L1 -1402 6406 5263 456 62 0 75 chr2 93768632 93768712 -156919142 - Alu SINE Alu -235 74 1 278 290 12 59 chr2 93768927 93769096 -156918758 - L1ME3 LINE L1 -88 6074 5914 551 281 55 80 chr2 93769197 93770176 -156917678 - L1M4c LINE L1 -4640 2006 1030 660 224 7 0 chr2 93770260 93770403 -156917451 + MER47A DNA MER2_type 7 150 -216 481 276 77 45 chr2 93770894 93771477 -156916377 - L1MC4a LINE L1 -1416 4730 4129 10540 184 37 5 chr2 93773001 93775100 -156912754 - MER70A-int LTR ERVL -1236 3787 1622 3306 223 51 5 chr2 93775100 93776196 -156911658 - MER70A-int LTR ERVL -3831 1192 1 1415 220 32 3 chr2 93776196 93776509 -156911345 - MER70A LTR ERVL 0 472 151 1498 108 0 0 chr2 93777105 93777300 -156910554 + AluSg/x SINE Alu 84 278 -32 1237 73 6 6 chr2 93777303 93777313 -156910541 + (GAAA)n Simple_repeat Simple_repeat 1 189 0 1237 73 6 6 chr2 93777313 93777492 -156910362 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 562 194 67 8 chr2 93777550 93777684 -156910170 + PABL_B LTR ERV1 511 652 -15 824 184 7 0 chr2 93777690 93777842 -156910012 - MER70A LTR ERVL -319 153 1 2076 221 43 14 chr2 93777850 93778406 -156909448 - L1MB3 LINE L1 -262 5921 5350 2141 146 31 48 chr2 93778406 93778954 -156908900 + MLT2A2 LTR ERVL 4 548 -6 1114 194 93 97 chr2 93779267 93779551 -156908303 + MLT1D LTR MaLR 33 316 -189 2634 64 0 0 chr2 93779551 93779862 -156907992 - AluY SINE Alu 0 311 1 1114 194 93 97 chr2 93779862 93780052 -156907802 + MLT1D LTR MaLR 316 505 0 183 42 0 0 chr2 93780292 93780316 -156907538 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 299 241 69 119 chr2 93780657 93780858 -156906996 + MIR3 SINE MIR 6 200 -62 370 304 50 28 chr2 93781898 93782079 -156905775 - MLT1L LTR MaLR -86 529 345 208 271 53 7 chr2 93783087 93783238 -156904616 + (TA)n Simple_repeat Simple_repeat 1 158 0 613 221 29 0 chr2 93784440 93784580 -156903274 + MER3 DNA MER1_type 11 154 -55 2359 179 32 6 chr2 93787489 93788171 -156899683 - L1PB2 LINE L1 -706 5445 4741 4440 116 8 18 chr2 93788164 93788881 -156898973 + L1PB2 LINE L1 5438 6147 -4 971 351 42 17 chr2 93789937 93790605 -156897249 + HERV16 LTR ERVL 2582 3263 -1901 210 174 0 0 chr2 93790992 93791038 -156896816 + A-rich Low_complexity Low_complexity 1 46 0 2123 107 0 4 chr2 93792114 93792395 -156895459 + AluSx SINE Alu 1 280 -32 592 25 37 0 chr2 93792395 93792476 -156895378 + (TAAAA)n Simple_repeat Simple_repeat 2 85 0 324 245 32 39 chr2 93792487 93792642 -156895212 + L1MC4a LINE L1 6370 6523 -1285 32 0 0 0 chr2 93792694 93792726 -156895128 + AT_rich Low_complexity Low_complexity 1 32 0 1179 265 45 32 chr2 93792728 93793222 -156894632 - L1MC4a LINE L1 -8 7800 7301 5137 69 1 0 chr2 93793265 93793916 -156893938 - L1PA7 LINE L1 -11 6143 5492 12428 89 4 3 chr2 93793916 93795781 -156892073 - L1PA7 LINE L1 -1321 4825 2960 291 28 0 0 chr2 93801955 93801991 -156885863 + (TG)n Simple_repeat Simple_repeat 2 37 0 235 244 7 82 chr2 93806916 93807051 -156880803 - L1ME3 LINE L1 -94 6068 5944 865 253 37 50 chr2 93807300 93807679 -156880175 - L1MC4a LINE L1 -139 7669 7296 1036 214 48 70 chr2 93807803 93808176 -156879678 + MLT1A1 LTR MaLR 1 365 0 621 213 25 35 chr2 93808691 93808888 -156878966 + MSTA-int LTR MaLR 1457 1651 0 2407 171 22 0 chr2 93808889 93809305 -156878549 + MSTA LTR MaLR 2 426 -2 2352 98 0 0 chr2 93809316 93809611 -156878243 - AluSc SINE Alu -10 299 5 450 295 32 13 chr2 93809630 93809786 -156878068 - MLT1A2 LTR MaLR -212 162 4 334 145 60 12 chr2 93810104 93810187 -156877667 - LTR52 LTR ERVL -334 87 1 1300 151 0 0 chr2 93810953 93811171 -156876683 + L1PA14 LINE L1 5942 6159 -2 8382 33 0 0 chr2 93812246 93814027 -156873827 + L1PA4 LINE L1 4370 6153 -2 236 254 0 0 chr2 93814060 93814119 -156873735 - L1MC5 LINE L1 -517 7444 7386 242 253 12 60 chr2 93814683 93814766 -156873088 + MLT1F LTR MaLR 108 186 -404 264 293 61 40 chr2 93814835 93815033 -156872821 + MLT1F LTR MaLR 336 537 -5 572 309 79 23 chr2 93815202 93815859 -156871995 + L1M4 LINE L1 4456 5149 -997 245 299 9 19 chr2 93816251 93816358 -156871496 + GA-rich Low_complexity Low_complexity 3 108 0 25 0 0 0 chr2 93817606 93817631 -156870223 + AT_rich Low_complexity Low_complexity 1 25 0 822 180 50 0 chr2 93818156 93818337 -156869517 + L1M4 LINE L1 5516 5706 -472 201 323 43 54 chr2 93818393 93818486 -156869368 + MIR SINE MIR 47 138 -70 898 290 72 34 chr2 93819005 93819432 -156868422 - L1ME3A LINE L1 -43 6363 5879 2264 89 0 0 chr2 93819432 93819761 -156868093 - AluSg SINE Alu 0 329 1 898 290 72 34 chr2 93819761 93820033 -156867821 - L1ME3A LINE L1 -527 5879 5619 555 288 101 28 chr2 93820169 93820735 -156867119 - L1ME3A LINE L1 -1417 4965 4359 2579 219 26 70 chr2 93821251 93821636 -156866218 + L1MA9 LINE L1 5398 5798 -514 198 0 0 0 chr2 93821636 93821658 -156866196 + (CA)n Simple_repeat Simple_repeat 1 22 0 2579 219 26 70 chr2 93821658 93821693 -156866161 + L1MA9 LINE L1 5798 5833 -479 183 42 0 0 chr2 93821693 93821717 -156866137 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1729 118 39 50 chr2 93821724 93822004 -156865850 - AluSx SINE Alu -35 277 1 2579 219 26 70 chr2 93822004 93822486 -156865368 + L1MA9 LINE L1 5839 6274 -38 585 203 7 0 chr2 93822728 93822866 -156864988 + L1MA6 LINE L1 6161 6299 -1 412 273 84 42 chr2 93825733 93825971 -156861883 - L1ME3 LINE L1 0 6162 5915 799 281 73 42 chr2 93826002 93826167 -156861687 - L1MDb LINE L1 -4559 1825 1667 4577 116 35 42 chr2 93826167 93826950 -156860904 + MER4E LTR ERV1 1 777 -2 799 281 73 42 chr2 93826950 93827584 -156860270 - L1MDb LINE L1 -4717 1667 1022 1665 179 63 24 chr2 93827594 93828198 -156859656 + LTR8A LTR ERV1 1 675 -52 4993 89 16 3 chr2 93828198 93828880 -156858974 + LTR8 LTR ERV1 1 691 0 1665 179 63 24 chr2 93828880 93828936 -156858918 + LTR8A LTR ERV1 675 727 0 3036 132 4 2 chr2 93829068 93829531 -156858323 + MER1A DNA MER1_type 66 529 0 317 356 0 0 chr2 93829532 93829622 -156858232 + L1MC4a LINE L1 6467 6556 -1252 1162 263 76 11 chr2 93829680 93830151 -156857703 - L1MD3 LINE L1 -19 7976 7475 726 152 120 69 chr2 93831672 93832059 -156855795 - LTR7 LTR ERV1 0 450 1 401 53 0 18 chr2 93833677 93833734 -156854120 + (TAA)n Simple_repeat Simple_repeat 1 56 0 920 134 0 43 chr2 93834532 93834696 -156853158 - AluSp/q SINE Alu -2 311 155 227 265 71 20 chr2 93836063 93836161 -156851693 - LTR52 LTR ERVL -310 111 9 415 280 124 11 chr2 93836369 93836555 -156851299 - MIR SINE MIR 0 262 56 534 270 65 9 chr2 93838079 93838401 -156849453 + L1ME3 LINE L1 3674 4013 -2133 436 280 96 34 chr2 93838459 93838698 -156849156 + L1ME3 LINE L1 4019 4272 -1874 676 237 107 37 chr2 93838718 93838776 -156849078 + L1ME3 LINE L1 4483 4536 -1610 957 9 45 0 chr2 93838776 93838886 -156848968 + L1PA4 LINE L1 6038 6152 -3 676 237 107 37 chr2 93838886 93839127 -156848727 + L1ME3 LINE L1 4536 4803 -1343 291 266 35 69 chr2 93839290 93839493 -156848361 + L1ME3 LINE L1 4945 5140 -1006 381 258 62 47 chr2 93839590 93839718 -156848136 + L1ME3 LINE L1 5330 5459 -707 3381 193 63 15 chr2 93839740 93840424 -156847430 + LTR62 LTR ERVK 1 717 -2 2093 177 83 2 chr2 93840424 93840831 -156847023 - LTR47A LTR ERVL -11 441 2 1133 303 48 22 chr2 93840843 93841420 -156846434 + L1ME3 LINE L1 5477 6068 -94 423 0 0 0 chr2 93842870 93842917 -156844937 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 1198 261 61 34 chr2 93843819 93844295 -156843559 + L1MC4a LINE L1 6445 6933 -875 1718 206 49 16 chr2 93844311 93844680 -156843174 - MSTD LTR MaLR -15 381 1 1096 192 80 0 chr2 93844680 93844904 -156842950 - MSTD-int LTR MaLR 0 1735 1494 328 238 16 0 chr2 93844904 93844967 -156842887 - MER2 DNA MER2_type 0 345 282 * 790 274 6 6 chr2 93844943 93845122 -156842732 - MER8 DNA MER2_type -60 179 1 1792 273 15 9 chr2 93845122 93845544 -156842310 - MSTD-int LTR MaLR -240 1495 1020 2865 3 0 3 chr2 93845886 93846195 -156841659 - AluY SINE Alu -3 308 1 339 327 115 25 chr2 93846482 93846760 -156841094 - MLT1L LTR MaLR -89 526 224 318 212 51 7 chr2 93847532 93847669 -156840185 + (TA)n Simple_repeat Simple_repeat 2 144 0 1052 208 81 92 chr2 93848651 93849011 -156838843 - MLT1A2 LTR MaLR -18 356 1 22 80 0 0 chr2 93849296 93849346 -156838508 + AT_rich Low_complexity Low_complexity 1 50 0 1999 144 7 0 chr2 93849570 93849876 -156837978 + AluSx SINE Alu 2 309 -3 21 36 0 0 chr2 93850888 93850916 -156836938 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr2 93852778 93852813 -156835041 + AT_rich Low_complexity Low_complexity 1 35 0 1215 249 90 43 chr2 93853771 93853988 -156833866 - LTR55 LTR ERV -11 537 332 4485 86 39 5 chr2 93853988 93854573 -156833281 - LTR14B LTR ERVK 0 608 4 1215 249 90 43 chr2 93854573 93854868 -156832986 - LTR55 LTR ERV -216 332 1 1788 203 76 16 chr2 93856350 93856719 -156831135 + MSTB LTR MaLR 1 391 -35 669 243 56 98 chr2 93859749 93860086 -156827768 - MLT1A2 LTR MaLR -5 369 47 324 103 35 0 chr2 93860370 93860428 -156827426 - L1PA3 LINE L1 -2 6153 6094 2087 109 10 7 chr2 93862007 93862301 -156825553 - AluSx SINE Alu -17 295 1 1744 160 28 0 chr2 93864767 93865054 -156822800 - AluSx SINE Alu -16 296 2 1291 252 65 50 chr2 93865993 93866389 -156821465 - LTR55 LTR ERV -5 543 135 2176 102 0 3 chr2 93866389 93866684 -156821170 + AluY SINE Alu 1 294 -17 1291 252 65 50 chr2 93866684 93866822 -156821032 - LTR55 LTR ERV -413 135 1 2094 65 0 0 chr2 93866982 93867242 -156820612 + AluY SINE Alu 49 308 -3 201 39 0 0 chr2 93868649 93868675 -156819179 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 365 268 39 42 chr2 93869750 93869931 -156817923 + HERVL LTR ERVL 2952 3136 -1900 666 264 88 22 chr2 93869978 93870296 -156817558 + L1M4 LINE L1 2641 2979 -3167 388 260 83 80 chr2 93874774 93875062 -156812792 - L1ME3 LINE L1 0 6162 5874 1029 315 54 24 chr2 93875070 93876078 -156811776 - L1M4c LINE L1 -4575 2384 1346 2465 138 67 47 chr2 93876803 93877254 -156810600 + LTR46 LTR ERV1 1 460 0 752 217 40 11 chr2 93877290 93877465 -156810389 + Tigger1 DNA MER2_type 1 180 -2238 * 1105 180 38 14 chr2 93877437 93877648 -156810206 + Tigger1 DNA MER2_type 2202 2417 -1 291 230 103 23 chr2 93878326 93878413 -156809441 - L1M4c LINE L1 -6187 701 608 23 33 0 0 chr2 93878746 93878776 -156809078 + AT_rich Low_complexity Low_complexity 1 30 0 436 291 21 37 chr2 93878800 93879041 -156808813 - L1M4 LINE L1 -996 5150 4914 1004 239 51 42 chr2 93879074 93879408 -156808446 + MLT1A1 LTR MaLR 1 337 -28 2334 105 13 0 chr2 93879442 93879748 -156808106 - AluSg SINE Alu 0 310 1 1913 147 13 13 chr2 93879863 93880175 -156807679 - AluSx SINE Alu 0 312 1 2140 135 3 0 chr2 93880197 93880508 -156807346 - AluSx SINE Alu 0 312 1 333 162 8 43 chr2 93880570 93880687 -156807167 + (TA)n Simple_repeat Simple_repeat 1 113 0 239 89 0 0 chr2 93880698 93880743 -156807111 + LTR66 LTR ERVL 394 438 -172 403 237 101 24 chr2 93880743 93880912 -156806942 - L1M4 LINE L1 -1490 4656 4475 1745 88 0 0 chr2 93881693 93881909 -156805945 - AluSq SINE Alu -97 216 1 180 179 0 0 chr2 93883337 93883376 -156804478 + (TGGA)n Simple_repeat Simple_repeat 3 41 0 1491 275 92 9 chr2 93884285 93885442 -156802412 + L1MC4 LINE L1 6462 7893 -149 246 155 0 52 chr2 93885456 93885514 -156802340 + L1MC4 LINE L1 7988 8042 0 1670 201 3 0 chr2 93885776 93886069 -156801785 - AluJb SINE Alu -13 299 6 495 357 62 40 chr2 93886627 93887030 -156800824 + MER115 DNA AcHobo 125 536 -157 637 315 97 12 chr2 93887042 93887467 -156800387 + L1MEc LINE L1 50 510 -5886 252 292 44 9 chr2 93887684 93887797 -156800057 - LTR67 LTR ERVL -53 504 388 8012 137 19 31 chr2 93888178 93889378 -156798476 + L1PA10 LINE L1 3423 4636 -1532 2357 79 7 7 chr2 93889378 93889682 -156798172 + AluY SINE Alu 1 304 -7 8012 137 19 31 chr2 93889682 93891258 -156796596 + L1PA10 LINE L1 4636 6157 -11 279 265 0 12 chr2 93891643 93891726 -156796128 + (TA)n Simple_repeat Simple_repeat 2 83 0 241 209 37 127 chr2 93892029 93892163 -156795691 - MLT1H LTR MaLR -22 527 406 21 57 0 0 chr2 93892419 93892454 -156795400 + AT_rich Low_complexity Low_complexity 1 35 0 204 250 0 0 chr2 93892772 93892836 -156795018 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 180 77 0 0 chr2 93892928 93892954 -156794900 + (CA)n Simple_repeat Simple_repeat 1 26 0 208 122 22 56 chr2 93892964 93893054 -156794800 + (TATAA)n Simple_repeat Simple_repeat 5 91 0 576 80 16 64 chr2 93893066 93893254 -156794600 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 43 35 0 0 chr2 93893254 93893311 -156794543 + AT_rich Low_complexity Low_complexity 1 57 0 304 11 103 23 chr2 93893312 93893399 -156794455 + (TA)n Simple_repeat Simple_repeat 1 94 0 251 273 0 0 chr2 93893402 93893468 -156794386 + (TATG)n Simple_repeat Simple_repeat 3 68 0 186 227 0 0 chr2 93893475 93893519 -156794335 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 1389 170 16 8 chr2 93893592 93893845 -156794009 - L1PB3 LINE L1 -118 6036 5782 610 130 56 4 chr2 93893855 93894333 -156793521 + (TA)n Simple_repeat Simple_repeat 1 502 0 5954 103 12 0 chr2 93894356 93895029 -156792825 - L1PA10 LINE L1 0 6168 5505 1847 173 0 7 chr2 93895029 93895324 -156792530 - AluSx SINE Alu -8 304 12 5954 103 12 0 chr2 93895324 93896080 -156791774 - L1PA10 LINE L1 -663 5505 4742 700 203 14 7 chr2 93898081 93898219 -156789635 + MSTD LTR MaLR 1 139 -257 4103 199 25 7 chr2 93898238 93898315 -156789539 - LTR39 LTR ERV1 -7 776 702 237 33 0 0 chr2 93898315 93898345 -156789509 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 4103 199 25 7 chr2 93898345 93899029 -156788825 - LTR39 LTR ERV1 -81 702 1 507 200 17 17 chr2 93899154 93899274 -156788580 + MSTD LTR MaLR 244 363 -2 364 259 106 24 chr2 93899307 93899477 -156788377 + LTR16C LTR ERVL 224 407 -84 204 246 47 23 chr2 93899749 93899920 -156787934 + (TA)n Simple_repeat Simple_repeat 1 175 0 897 257 31 63 chr2 93901430 93901776 -156786078 - MLT1A2 LTR MaLR -29 399 31 419 304 7 0 chr2 93902602 93902740 -156785114 + MER3 DNA MER1_type 18 156 -53 474 196 54 0 chr2 93905658 93905770 -156782084 + MER58 DNA MER1_type 2278 2395 -25 24 85 0 0 chr2 93905840 93905899 -156781955 + AT_rich Low_complexity Low_complexity 1 59 0 4915 55 2 0 chr2 93906057 93906656 -156781198 + L1PA5 LINE L1 5555 6154 0 589 224 154 39 chr2 93907398 93907657 -156780197 + MLT1D LTR MaLR 46 334 -171 1462 229 91 20 chr2 93907686 93908127 -156779727 - MLT1D LTR MaLR -7 498 27 216 0 0 0 chr2 93908127 93908151 -156779703 + (T)n Simple_repeat Simple_repeat 1 24 0 234 0 0 0 chr2 93908350 93908376 -156779478 + (CTG)n Simple_repeat Simple_repeat 2 27 0 487 296 106 31 chr2 93908646 93908967 -156778887 - LTR16C LTR ERVL -78 413 69 489 305 40 6 chr2 93910989 93911166 -156776688 - MLT1L LTR MaLR -91 524 342 2634 53 0 0 chr2 93911209 93911511 -156776343 - AluY SINE Alu -9 302 1 2209 104 0 47 chr2 93913184 93913501 -156774353 + AluSq SINE Alu 1 302 -11 225 0 0 0 chr2 93913531 93913556 -156774298 + (A)n Simple_repeat Simple_repeat 1 25 0 261 329 34 14 chr2 93914233 93914379 -156773475 - HERVL LTR ERVL -1335 4319 4171 189 74 0 0 chr2 93915056 93915083 -156772771 + (TA)n Simple_repeat Simple_repeat 2 28 0 326 188 94 51 chr2 93917942 93918059 -156769795 + LTR16C LTR ERVL 110 231 -260 336 277 20 10 chr2 93918096 93918197 -156769657 + MIR SINE MIR 45 146 -62 195 42 0 0 chr2 93918250 93918274 -156769580 + (GA)n Simple_repeat Simple_repeat 2 25 0 1125 262 111 25 chr2 93918545 93918976 -156768878 - MLT1D LTR MaLR -2 503 36 223 255 0 0 chr2 93919052 93919103 -156768751 + CT-rich Low_complexity Low_complexity 2 52 0 27 62 0 0 chr2 93919923 93919971 -156767883 + AT_rich Low_complexity Low_complexity 1 48 0 465 267 96 14 chr2 93920431 93920577 -156767277 + MER50 LTR ERV1 11 168 -566 196 89 22 22 chr2 93920646 93920691 -156767163 + (TAAAAA)n Simple_repeat Simple_repeat 3 47 0 28 0 0 0 chr2 93920693 93920721 -156767133 + AT_rich Low_complexity Low_complexity 1 28 0 365 191 9 0 chr2 93920739 93920854 -156767000 + (TA)n Simple_repeat Simple_repeat 1 116 0 1897 169 69 58 chr2 93920867 93921316 -156766538 + MER50 LTR ERV1 281 734 0 263 310 190 7 chr2 93921806 93921948 -156765906 - MLT1L LTR MaLR -92 523 356 28 48 0 0 chr2 93922910 93922952 -156764902 + AT_rich Low_complexity Low_complexity 1 42 0 823 231 19 99 chr2 93923262 93923606 -156764248 - MLT1B LTR MaLR -9 448 67 180 0 0 0 chr2 93923873 93923893 -156763961 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 3830 120 45 24 chr2 93924759 93925386 -156762468 - LTR9B LTR ERV1 0 644 5 733 165 0 0 chr2 93925440 93925549 -156762305 + HERVL18 LTR ERVL 4994 5102 -945 756 132 0 0 chr2 93925977 93926083 -156761771 - LTR8 LTR ERV1 0 691 586 372 74 37 0 chr2 93926085 93926139 -156761715 - LTR8A LTR ERV1 -671 56 1 2088 114 3 14 chr2 93927119 93927416 -156760438 - AluSx SINE Alu -18 294 1 691 256 77 45 chr2 93928559 93929003 -156758851 - LTR48B LTR ERV1 -3 784 157 707 230 0 0 chr2 93929315 93929454 -156758400 + MSTD LTR MaLR 1 139 -257 4459 189 9 16 chr2 93929466 93930255 -156757599 - LTR39 LTR ERV1 0 783 1 555 168 69 84 chr2 93930360 93930491 -156757363 + MSTD LTR MaLR 246 396 0 515 305 84 10 chr2 93930493 93930696 -156757158 + LTR16C LTR ERVL 190 407 -84 2122 127 3 0 chr2 93930795 93931086 -156756768 - AluSq SINE Alu -21 292 1 2173 106 3 3 chr2 93931244 93931546 -156756308 + AluSq SINE Alu 1 302 -11 1664 231 94 18 chr2 93931737 93932195 -156755659 + MLT1D LTR MaLR 13 505 0 266 361 65 7 chr2 93932806 93932961 -156754893 + MIR SINE MIR 34 197 -65 336 48 0 0 chr2 93932971 93933013 -156754841 + (TG)n Simple_repeat Simple_repeat 2 43 0 487 325 64 25 chr2 93934059 93934385 -156753469 - MLT1L LTR MaLR -86 529 191 557 144 21 10 chr2 93935271 93935368 -156752486 + MER4A LTR ERV1 1 98 -566 1577 159 11 77 chr2 93935368 93935739 -156752115 + MER4A LTR ERV1 261 664 0 617 259 34 70 chr2 93935995 93936295 -156751559 - MLT1A2 LTR MaLR -6 377 91 1824 103 33 15 chr2 93939190 93939461 -156748393 + AluSp SINE Alu 1 276 -37 414 0 0 0 chr2 93939469 93939515 -156748339 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 10412 249 16 21 chr2 93939605 93939724 -156748130 + L1PA15 LINE L1 2260 2378 -3768 2278 81 0 3 chr2 93939724 93940008 -156747846 + AluY SINE Alu 1 283 -28 226 0 0 0 chr2 93940008 93940033 -156747821 + (CAAAA)n Simple_repeat Simple_repeat 2 175 0 10412 249 16 21 chr2 93940033 93943021 -156744833 + L1PA15 LINE L1 2378 5352 -794 3486 136 12 4 chr2 93943426 93944005 -156743849 + L1PA15 LINE L1 5319 5900 -265 2195 126 0 0 chr2 93944074 93944383 -156743471 - AluSx SINE Alu -3 309 1 269 298 24 12 chr2 93945519 93945603 -156742251 - HERVL LTR ERVL -1420 4234 4150 226 300 11 0 chr2 93946294 93946384 -156741470 + (TA)n Simple_repeat Simple_repeat 2 92 0 831 199 0 7 chr2 93947473 93947614 -156740240 - FLAM_C SINE Alu -2 141 2 272 241 36 48 chr2 93947834 93947917 -156739937 + MLT2E LTR ERVL 44 125 -503 441 292 83 45 chr2 93950698 93950986 -156736868 + LTR16C LTR ERVL 93 391 -100 1109 232 113 12 chr2 93951154 93951490 -156736364 + MLT1D LTR MaLR 136 505 0 218 349 0 0 chr2 93952121 93952184 -156735670 + MIR SINE MIR 45 107 -101 885 90 33 0 chr2 93952412 93952534 -156735320 - L1PA6 LINE L1 -1 6153 6028 882 87 0 24 chr2 93952534 93952661 -156735193 - L1P LINE L1 -3419 2727 2604 243 0 0 0 chr2 93952673 93952700 -156735154 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1681 136 0 70 chr2 93952702 93953004 -156734850 - AluY SINE Alu -30 281 1 928 221 75 110 chr2 93953207 93953698 -156734156 - MLT1D LTR MaLR -2 488 29 267 260 0 0 chr2 93954225 93954298 -156733556 + MER41A LTR ERV1 159 231 -323 737 209 84 83 chr2 93955025 93955389 -156732465 - MLT1A2 LTR MaLR -17 450 1 802 201 6 6 chr2 93958709 93958878 -156728976 + AluJb SINE Alu 1 169 -143 769 150 23 30 chr2 93960575 93960708 -156727146 - AluSq/x SINE Alu -180 133 2 4617 173 21 18 chr2 93962550 93963804 -156724050 + L1M1 LINE L1 4334 5586 -717 1649 240 103 22 chr2 93965393 93966091 -156721763 + L1M3e LINE L1 1995 2717 -4390 1894 174 52 33 chr2 93966091 93966459 -156721395 - THE1C LTR MaLR 0 375 1 1649 240 103 22 chr2 93966459 93966692 -156721162 + L1M3e LINE L1 2717 2930 -4177 1198 145 62 0 chr2 93966693 93966935 -156720919 - L1MA8 LINE L1 -4 6287 6031 5905 58 4 9 chr2 93967473 93968319 -156719535 + L1P LINE L1 1 969 -5177 250 182 0 55 chr2 93968948 93969003 -156718851 - L2 LINE L2 0 3313 3262 318 369 16 8 chr2 93969296 93969418 -156718436 + L2 LINE L2 3150 3272 0 4850 56 2 90 chr2 94019884 94021045 -156666809 - SVA Other Other -723 1148 327 984 60 0 0 chr2 94021046 94021163 -156666691 - AluSq/x SINE Alu -174 138 22 761 172 23 16 chr2 94021194 94021322 -156666532 - FLAM_C SINE Alu -3 130 2 291 184 132 129 chr2 94021386 94021658 -156666196 - L1M3 LINE L1 -618 5553 5281 1026 212 19 8 chr2 94021832 94022096 -156665758 + L1PA15 LINE L1 5086 5352 -794 3486 136 12 4 chr2 94022501 94023080 -156664774 + L1PA15 LINE L1 5319 5900 -265 2207 123 0 0 chr2 94023149 94023458 -156664396 - AluSx SINE Alu -3 309 1 180 0 0 0 chr2 94024394 94024414 -156663440 + (T)n Simple_repeat Simple_repeat 1 20 0 269 298 24 12 chr2 94024596 94024680 -156663174 - HERVL LTR ERVL -1420 4234 4150 1928 162 0 0 chr2 94025806 94026102 -156661752 + AluSx SINE Alu 3 298 -14 30 0 0 0 chr2 94026372 94026402 -156661452 + AT_rich Low_complexity Low_complexity 1 30 0 1366 161 102 14 chr2 94026548 94026833 -156661021 + AluJo SINE Alu 1 310 -2 421 309 57 35 chr2 94026844 94027074 -156660780 + L1M4 LINE L1 173 407 -5906 2191 241 29 45 chr2 94027371 94027828 -156660026 + L1M4 LINE L1 798 1261 -5052 3276 173 20 74 chr2 94027828 94028558 -156659296 - LTR8 LTR ERV1 0 691 1 2191 241 29 45 chr2 94028558 94028981 -156658873 + L1M4 LINE L1 1261 1797 -4516 226 300 11 0 chr2 94029307 94029397 -156658457 + (TA)n Simple_repeat Simple_repeat 2 92 0 831 199 0 7 chr2 94030486 94030627 -156657227 - FLAM_C SINE Alu -2 141 2 272 241 36 48 chr2 94030847 94030930 -156656924 + MLT2E LTR ERVL 44 125 -503 189 0 0 0 chr2 94033614 94033635 -156654219 + (TG)n Simple_repeat Simple_repeat 1 21 0 441 292 83 45 chr2 94033712 94034000 -156653854 + LTR16C LTR ERVL 93 391 -100 1109 232 113 12 chr2 94034168 94034504 -156653350 + MLT1D LTR MaLR 136 505 0 531 258 74 27 chr2 94035292 94035490 -156652364 + ERVL LTR ERVL 2927 3176 -1900 511 251 97 83 chr2 94035504 94035718 -156652136 + L1M4 LINE L1 2844 3053 -3329 905 171 19 0 chr2 94035718 94035876 -156651978 + L1PB3 LINE L1 5987 6147 -7 511 251 97 83 chr2 94035876 94036155 -156651699 + L1M4 LINE L1 3053 3344 -3038 456 174 0 0 chr2 94036841 94036910 -156650944 - AluS SINE Alu -243 70 2 31 76 0 0 chr2 94037133 94037199 -156650655 + AT_rich Low_complexity Low_complexity 1 66 0 1559 193 27 17 chr2 94037401 94037702 -156650152 - AluJo SINE Alu -8 304 1 24 53 0 0 chr2 94037736 94037774 -156650080 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 94038605 94038627 -156649227 + AT_rich Low_complexity Low_complexity 1 22 0 275 228 117 51 chr2 94038671 94038868 -156648986 + L1M4 LINE L1 4826 5035 -1347 217 294 0 15 chr2 94038973 94039041 -156648813 + (TATG)n Simple_repeat Simple_repeat 2 68 0 917 231 94 128 chr2 94139051 94139527 -156548327 - MLT1D LTR MaLR -17 488 29 267 260 0 0 chr2 94140054 94140127 -156547727 + MER41B LTR ERV1 159 231 -404 733 209 84 83 chr2 94140854 94141218 -156546636 - MLT1A2 LTR MaLR -17 450 1 825 195 6 6 chr2 94144639 94144808 -156543046 + AluJb SINE Alu 1 169 -143 718 149 22 30 chr2 94146505 94146639 -156541215 - AluSq/x SINE Alu -180 133 1 772 265 108 40 chr2 94148425 94148897 -156538957 - LTR55 LTR ERV -2 546 43 24 0 0 0 chr2 94150065 94150089 -156537765 + AT_rich Low_complexity Low_complexity 1 24 0 191 59 0 29 chr2 94150260 94150294 -156537560 + (TAA)n Simple_repeat Simple_repeat 3 35 0 478 303 30 2 chr2 94151604 94151787 -156536067 + ERVL LTR ERVL 2948 3176 -1900 318 251 97 83 chr2 94151801 94152015 -156535839 + L1M4 LINE L1 2608 2817 -3329 830 171 19 0 chr2 94152015 94152173 -156535681 + L1PB3 LINE L1 5987 6147 -7 318 251 97 83 chr2 94152173 94152452 -156535402 + L1M4 LINE L1 2817 3108 -3038 2099 75 45 0 chr2 94153834 94154142 -156533712 + AluY SINE Alu 1 320 0 351 179 0 0 chr2 94154142 94154209 -156533645 + (TA)n Simple_repeat Simple_repeat 1 67 0 367 228 11 0 chr2 94155898 94155990 -156531864 - LTR48B LTR ERV1 -3 641 549 739 236 0 0 chr2 94156023 94156163 -156531691 - AluJb SINE Alu -33 279 140 1296 67 0 0 chr2 94156274 94156454 -156531400 + (CATTC)n Satellite Satellite 1 180 0 577 153 6 31 chr2 94156465 94156628 -156531226 + (CATTC)n Satellite Satellite 2 160 0 993 121 0 0 chr2 94156644 94156818 -156531036 + (CATTC)n Satellite Satellite 2 175 0 786 161 0 0 chr2 94156834 94157107 -156530747 + (CATTC)n Satellite Satellite 1 273 0 901 131 4 24 chr2 94157133 94157387 -156530467 + (CATTC)n Satellite Satellite 1 249 0 1654 48 0 0 chr2 94157487 94157693 -156530161 + L1PA2 LINE L1 5949 6154 -1 1107 108 7 8 chr2 94157695 94158838 -156529016 - HSATII Satellite Satellite 0 1142 1 688 138 12 6 chr2 94158800 94158967 -156528887 + (GAATG)n Satellite Satellite 2 169 0 * 921 131 0 0 chr2 94158996 94159172 -156528682 + (GAATG)n Satellite Satellite 2 177 0 666 145 0 0 chr2 94159203 94159341 -156528513 + (GAATG)n Satellite Satellite 3 140 0 912 136 0 0 chr2 94159353 94159529 -156528325 + (GAATG)n Satellite Satellite 5 180 0 1010 181 0 0 chr2 94259543 94259720 -156428134 - L1ME LINE L1 -480 5686 5510 759 215 69 0 chr2 94259742 94259975 -156427879 - L1ME LINE L1 -780 5366 5118 222 230 11 35 chr2 94259994 94260081 -156427773 + T-rich Low_complexity Low_complexity 4 88 0 24 0 0 0 chr2 94260794 94260818 -156427036 + AT_rich Low_complexity Low_complexity 1 24 0 384 261 153 51 chr2 94261020 94261373 -156426481 - L1MC5 LINE L1 -26 7935 7547 270 0 0 0 chr2 94261406 94261436 -156426418 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 239 229 180 49 chr2 94261737 94261859 -156425995 - MLT1J LTR MaLR -97 414 277 528 250 65 67 chr2 94262072 94262428 -156425426 + L1ME LINE L1 5274 5628 -534 1124 177 92 53 chr2 94262452 94262551 -156425303 - L1MD2 LINE L1 -423 5936 5842 1755 126 6 69 chr2 94262551 94262868 -156424986 - AluJo SINE Alu -11 301 5 1124 177 92 53 chr2 94262868 94263050 -156424804 - L1MD2 LINE L1 -517 5842 5644 1274 236 32 6 chr2 94263064 94263403 -156424451 - L1MDa LINE L1 -3159 3381 3034 915 211 38 38 chr2 94263443 94263680 -156424174 - L1MDa LINE L1 -5342 1198 962 1888 194 24 13 chr2 94263683 94264064 -156423790 - L1MDa LINE L1 -6153 387 3 902 112 46 23 chr2 94264461 94264939 -156422915 + GA-rich Low_complexity Low_complexity 1 488 0 2297 91 0 3 chr2 94265105 94265401 -156422453 + AluSg SINE Alu 1 295 -15 22 35 0 0 chr2 94265726 94265755 -156422099 + AT_rich Low_complexity Low_complexity 1 29 0 285 98 0 0 chr2 94265781 94265822 -156422032 + (TC)n Simple_repeat Simple_repeat 2 42 0 768 110 175 0 chr2 94266155 94266309 -156421545 - Tigger7 DNA MER2_type -39 2452 2272 * 1655 194 19 9 chr2 94266284 94266599 -156421255 - Tigger7 DNA MER2_type -415 318 1 314 211 0 22 chr2 94266635 94266725 -156421129 + (CATA)n Simple_repeat Simple_repeat 3 90 0 630 182 41 114 chr2 94266737 94266957 -156420897 - LTR37B LTR ERV1 -169 299 96 33 43 0 0 chr2 94266981 94267028 -156420826 + AT_rich Low_complexity Low_complexity 1 47 0 4014 196 22 48 chr2 94267750 94268742 -156419112 + LTR5 LTR ERVK 3 968 -1 322 57 38 0 chr2 94269869 94269922 -156417932 + (TC)n Simple_repeat Simple_repeat 1 55 0 307 309 109 6 chr2 94270974 94271139 -156416715 - L1MC/D LINE L1 -1959 5849 5668 693 212 125 16 chr2 94271270 94271454 -156416400 + MIR SINE MIR 48 251 -11 245 317 155 73 chr2 94271814 94271964 -156415890 - L2 LINE L2 -1 3271 3135 2657 45 0 0 chr2 94271964 94272273 -156415581 + AluY SINE Alu 1 309 -2 245 317 155 73 chr2 94272273 94272535 -156415319 - L2 LINE L2 -137 3135 2825 21 0 0 0 chr2 94273057 94273078 -156414776 + AT_rich Low_complexity Low_complexity 1 21 0 1999 144 7 0 chr2 94273950 94274256 -156413598 - AluSx SINE Alu -3 309 2 22 80 0 0 chr2 94274480 94274530 -156413324 + AT_rich Low_complexity Low_complexity 1 50 0 1052 208 81 92 chr2 94274815 94275175 -156412679 + MLT1A2 LTR MaLR 1 356 -18 318 212 51 7 chr2 94276157 94276294 -156411560 + (TA)n Simple_repeat Simple_repeat 2 144 0 339 327 115 25 chr2 94277066 94277344 -156410510 + MLT1L LTR MaLR 224 526 -89 2875 3 0 3 chr2 94277631 94277941 -156409913 + AluY SINE Alu 1 309 -2 1792 273 15 9 chr2 94278283 94278705 -156409149 + MLT-int LTR MaLR 1020 1495 -240 790 274 6 6 chr2 94278705 94278884 -156408970 + MER8 DNA MER2_type 1 179 -60 328 238 16 0 chr2 94278860 94278923 -156408931 + MER2 DNA MER2_type 282 345 0 * 1096 192 80 0 chr2 94278923 94279147 -156408707 + MSTD-int LTR MaLR 1494 1735 0 1798 206 61 16 chr2 94279147 94279526 -156408328 + MSTD LTR MaLR 1 396 0 1169 263 61 34 chr2 94279532 94280008 -156407846 - L1MC4a LINE L1 -875 6933 6445 459 0 0 0 chr2 94280910 94280961 -156406893 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 1165 302 48 22 chr2 94282412 94282989 -156404865 - L1ME3 LINE L1 -94 6068 5477 2093 177 83 2 chr2 94283001 94283408 -156404446 + LTR47A LTR ERVL 2 441 -11 1810 178 96 0 chr2 94283408 94283751 -156404103 - LTR62 LTR ERVK -2 717 342 291 239 116 65 chr2 94283942 94284097 -156403757 - L1ME3 LINE L1 -1343 4803 4641 3053 125 5 2 chr2 94284208 94284639 -156403215 + MER1A DNA MER1_type 98 529 0 311 356 0 0 chr2 94284640 94284730 -156403124 + L1MC4a LINE L1 6467 6556 -1252 1359 258 74 18 chr2 94284788 94285276 -156402578 - L1MD3 LINE L1 -19 7976 7462 803 145 120 69 chr2 94286780 94287167 -156400687 - LTR7 LTR ERV1 0 450 1 401 53 0 18 chr2 94288785 94288842 -156399012 + (TAA)n Simple_repeat Simple_repeat 1 56 0 908 135 0 43 chr2 94289640 94289803 -156398051 - AluSp/q SINE Alu -3 310 155 259 265 71 20 chr2 94291170 94291268 -156396586 - LTR52 LTR ERVL -310 111 9 242 272 70 18 chr2 94291274 94291388 -156396466 - L1ME LINE L1 -5947 123 4 386 280 124 11 chr2 94291476 94291662 -156396192 - MIR SINE MIR 0 262 56 550 253 71 103 chr2 94293184 94293805 -156394049 + L1M4 LINE L1 3672 4272 -1874 330 254 88 0 chr2 94293825 94293883 -156393971 + L1M4 LINE L1 4483 4535 -1611 957 9 45 0 chr2 94293883 94293993 -156393861 + L1PA4 LINE L1 6038 6152 -3 330 254 88 0 chr2 94293993 94294048 -156393806 + L1M4 LINE L1 4535 4606 -1540 225 276 8 24 chr2 94494051 94494178 -156193676 + (TTATA)n Simple_repeat Simple_repeat 5 129 0 2133 102 0 0 chr2 94494259 94494542 -156193312 - AluSx SINE Alu -18 294 12 26 0 0 0 chr2 94494558 94494584 -156193270 + AT_rich Low_complexity Low_complexity 1 26 0 321 247 31 12 chr2 94494658 94494820 -156193034 + (TA)n Simple_repeat Simple_repeat 2 166 0 320 297 65 43 chr2 94494967 94495105 -156192749 + L1MC4 LINE L1 6563 6703 -1339 360 275 81 59 chr2 94495153 94495426 -156192428 + L1MCa LINE L1 1819 2097 -4329 262 110 92 28 chr2 94495426 94495535 -156192319 + (TA)n Simple_repeat Simple_repeat 1 116 0 235 245 33 20 chr2 94495607 94495758 -156192096 + (TA)n Simple_repeat Simple_repeat 2 154 0 1854 130 3 3 chr2 94496245 94496530 -156191324 - AluSq SINE Alu -5 308 24 24 0 0 0 chr2 94496954 94496978 -156190876 + AT_rich Low_complexity Low_complexity 1 24 0 316 203 43 14 chr2 94497037 94497175 -156190679 + (TA)n Simple_repeat Simple_repeat 2 143 0 209 230 58 14 chr2 94497257 94497396 -156190458 + (TA)n Simple_repeat Simple_repeat 2 146 0 774 75 3 72 chr2 94497635 94498340 -156189514 + (CAGC)n Simple_repeat Simple_repeat 1 656 0 830 38 0 70 chr2 94498372 94498558 -156189296 + (CAGC)n Simple_repeat Simple_repeat 4 176 0 407 109 0 55 chr2 94498578 94498706 -156189148 + (CAGC)n Simple_repeat Simple_repeat 2 122 0 598 78 0 73 chr2 94498742 94498933 -156188921 + (CAGC)n Simple_repeat Simple_repeat 2 178 0 720 57 0 77 chr2 94498945 94499139 -156188715 + (CAGC)n Simple_repeat Simple_repeat 1 179 0 676 80 0 75 chr2 94499156 94499842 -156188012 + (CAGC)n Simple_repeat Simple_repeat 1 634 0 650 98 0 73 chr2 94499857 94500304 -156187550 + (CAGC)n Simple_repeat Simple_repeat 1 414 0 793 47 0 73 chr2 94500316 94500508 -156187346 + (CAGC)n Simple_repeat Simple_repeat 3 180 0 727 100 0 66 chr2 94500519 94501796 -156186058 + (CAGC)n Simple_repeat Simple_repeat 1 1193 0 840 56 0 75 chr2 94501902 94502631 -156185223 + (CAGC)n Simple_repeat Simple_repeat 1 674 0 868 71 1 71 chr2 94502682 94503895 -156183959 + (CAGC)n Simple_repeat Simple_repeat 1 1127 0 692 45 0 104 chr2 94503906 94504107 -156183747 + (CAGC)n Simple_repeat Simple_repeat 1 180 0 520 84 0 74 chr2 94504157 94504347 -156183507 + (CAGC)n Simple_repeat Simple_repeat 2 177 0 849 48 11 58 chr2 94504378 94504566 -156183288 + (CAGC)n Simple_repeat Simple_repeat 2 180 0 807 69 0 69 chr2 94504587 94505122 -156182732 + (CAGC)n Simple_repeat Simple_repeat 1 497 0 877 66 0 59 chr2 94505133 94505427 -156182427 + (CAGC)n Simple_repeat Simple_repeat 1 276 0 755 68 3 68 chr2 94505530 94505855 -156181999 + (CAGC)n Simple_repeat Simple_repeat 1 303 0 772 47 0 73 chr2 94505883 94506074 -156181780 + (CAGC)n Simple_repeat Simple_repeat 2 178 0 776 69 4 65 chr2 94506086 94506364 -156181490 + (CAGC)n Simple_repeat Simple_repeat 1 260 0 656 82 0 71 chr2 94506407 94506591 -156181263 + (CAGC)n Simple_repeat Simple_repeat 4 174 0 787 65 0 59 chr2 94506623 94506809 -156181045 + (CAGC)n Simple_repeat Simple_repeat 4 178 0 492 98 0 77 chr2 94506849 94507043 -156180811 + (CAGC)n Simple_repeat Simple_repeat 2 180 0 684 64 0 76 chr2 94507096 94507444 -156180410 + (CAGC)n Simple_repeat Simple_repeat 1 321 0 644 80 0 69 chr2 94507511 94507699 -156180155 + (CAGC)n Simple_repeat Simple_repeat 4 178 0 809 73 0 70 chr2 94507747 94508130 -156179724 + (CAGC)n Simple_repeat Simple_repeat 1 356 0 830 74 0 73 chr2 94508198 94509336 -156178518 + (CAGC)n Simple_repeat Simple_repeat 1 1054 0 447 103 0 77 chr2 94509404 94509598 -156178256 + (CAGC)n Simple_repeat Simple_repeat 2 180 0 618 58 0 85 chr2 94509617 94509805 -156178049 + (CAGC)n Simple_repeat Simple_repeat 3 174 0 721 94 0 68 chr2 94509818 94510436 -156177418 + (CAGC)n Simple_repeat Simple_repeat 1 575 0 662 89 0 72 chr2 94510458 94510943 -156176911 + (CAGC)n Simple_repeat Simple_repeat 1 450 0 752 78 0 72 chr2 94510969 94511329 -156176525 + (CAGC)n Simple_repeat Simple_repeat 1 334 0 985 80 0 57 chr2 94511362 94511970 -156175884 + (CAGC)n Simple_repeat Simple_repeat 1 573 0 2262 90 7 7 chr2 94514198 94514508 -156173346 - AluY SINE Alu -1 310 1 263 228 53 0 chr2 94514612 94514669 -156173185 - L2 LINE L2 0 3272 3213 1402 222 122 64 chr2 94514802 94515270 -156172584 - MLT1F LTR MaLR -47 495 1 304 220 28 128 chr2 94515434 94515543 -156172311 - MLT1J LTR MaLR -191 320 223 327 238 25 0 chr2 94515725 94515805 -156172049 + MLT1F LTR MaLR 414 495 -47 186 353 94 0 chr2 94516266 94516351 -156171503 - L2 LINE L2 -5 3308 3216 505 306 165 0 chr2 94516475 94516681 -156171173 + MIR SINE MIR 13 252 -10 309 186 0 0 chr2 94516689 94516759 -156171095 + (ATG)n Simple_repeat Simple_repeat 2 71 0 1120 58 7 0 chr2 94517193 94517330 -156170524 + AluSq/x SINE Alu 3 140 -172 1022 126 7 0 chr2 94517566 94517717 -156170137 + AluSg/x SINE Alu 159 310 0 363 212 50 20 chr2 94518051 94518150 -156169704 - L2 LINE L2 -2 3311 3210 256 251 45 65 chr2 94518801 94518972 -156168882 + L1ME4a LINE L1 5838 6050 -71 2231 91 10 0 chr2 94518972 94519268 -156168586 + AluSg SINE Alu 1 299 -11 256 251 45 65 chr2 94519268 94519338 -156168516 + L1ME4a LINE L1 6050 6120 -1 315 290 65 45 chr2 94520009 94520209 -156167645 - MLT1J LTR MaLR 0 511 308 * 416 261 28 49 chr2 94520198 94520340 -156167514 - MLT1J LTR MaLR -369 142 4 1793 163 3 3 chr2 94520849 94521149 -156166705 + AluJo SINE Alu 5 304 -8 2010 163 62 8 chr2 94521157 94521526 -156166328 - L1MB5 LINE L1 -13 6161 5773 33 25 0 0 chr2 94521735 94521775 -156166079 + AT_rich Low_complexity Low_complexity 1 40 0 661 269 41 37 chr2 94522188 94522433 -156165421 - MIR SINE MIR 0 262 17 839 104 0 0 chr2 94523575 94523690 -156164164 + AluSc SINE Alu 1 115 -194 657 210 48 40 chr2 94523884 94524136 -156163718 - L1MC5 LINE L1 -36 7925 7672 645 126 107 0 chr2 94527349 94527452 -156160402 + AluSq/x SINE Alu 2 115 -198 36 0 0 0 chr2 94527452 94527488 -156160366 + AT_rich Low_complexity Low_complexity 1 36 0 193 311 108 0 chr2 94527769 94527843 -156160011 + L2 LINE L2 3188 3269 -3 195 42 0 0 chr2 94529172 94529196 -156158658 + (T)n Simple_repeat Simple_repeat 1 24 0 32 57 0 0 chr2 94531017 94531070 -156156784 + AT_rich Low_complexity Low_complexity 1 53 0 23 0 0 0 chr2 94531379 94531402 -156156452 + AT_rich Low_complexity Low_complexity 1 23 0 393 252 13 26 chr2 94531435 94531590 -156156264 + L1M4 LINE L1 4980 5132 -1014 1968 113 7 0 chr2 94531612 94531886 -156155968 + AluSx SINE Alu 1 276 -36 198 0 0 0 chr2 94531892 94531914 -156155940 + (TAA)n Simple_repeat Simple_repeat 2 23 0 194 394 109 7 chr2 94532149 94532286 -156155568 - MIR SINE MIR -52 210 60 1870 157 7 7 chr2 94532951 94533257 -156154597 + AluJb SINE Alu 1 306 -6 2048 146 0 0 chr2 94533410 94533718 -156154136 + AluSx SINE Alu 1 308 -4 374 282 23 58 chr2 94533719 94533893 -156153961 + MER66A-int LTR ERV1 2390 2557 -4201 1542 158 8 19 chr2 94533894 94534189 -156153665 + AluSx SINE Alu 28 319 0 1472 206 61 24 chr2 94534189 94534753 -156153101 + MER66A-int LTR ERV1 4637 6676 0 1482 211 151 10 chr2 94534753 94535137 -156152717 + MER66A LTR ERV1 1 438 -40 300 295 18 0 chr2 94535147 94535259 -156152595 - L1M4 LINE L1 -2763 3383 3270 1715 115 42 4 chr2 94535260 94535520 -156152334 - AluY SINE Alu -4 307 38 2118 133 0 0 chr2 94535852 94536154 -156151700 + AluSx SINE Alu 1 302 -10 410 350 25 15 chr2 94537437 94537634 -156150220 - MIR SINE MIR 0 262 64 2427 57 0 0 chr2 94537768 94538067 -156149787 + AluY SINE Alu 1 299 -12 775 42 0 74 chr2 94539375 94539564 -156148290 + (GCTG)n Simple_repeat Simple_repeat 4 178 0 769 89 0 64 chr2 94539596 94539961 -156147893 + (GCTG)n Simple_repeat Simple_repeat 1 341 0 534 66 0 96 chr2 94539998 94540196 -156147658 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 697 85 0 69 chr2 94540227 94540947 -156146907 + (GCTG)n Simple_repeat Simple_repeat 1 670 0 416 66 0 66 chr2 94540980 94541086 -156146768 + (GCTG)n Simple_repeat Simple_repeat 4 102 0 810 58 0 63 chr2 94541129 94541318 -156146536 + (GCTG)n Simple_repeat Simple_repeat 4 180 0 472 61 0 70 chr2 94541337 94541452 -156146402 + (GCTG)n Simple_repeat Simple_repeat 4 110 0 640 67 3 79 chr2 94541495 94541799 -156146055 + (GCTG)n Simple_repeat Simple_repeat 1 280 0 771 46 0 77 chr2 94541813 94542008 -156145846 + (GCTG)n Simple_repeat Simple_repeat 1 180 0 610 135 0 69 chr2 94542029 94542325 -156145529 + (GCTG)n Simple_repeat Simple_repeat 1 275 0 862 69 0 67 chr2 94542709 94543549 -156144305 + (CAGC)n Simple_repeat Simple_repeat 1 783 0 663 98 0 69 chr2 94543575 94543961 -156143893 + (CAGC)n Simple_repeat Simple_repeat 1 359 0 957 45 0 58 chr2 94543973 94544360 -156143494 + (CAGC)n Simple_repeat Simple_repeat 1 364 0 700 62 0 72 chr2 94544377 94544571 -156143283 + (CAGC)n Simple_repeat Simple_repeat 1 180 0 316 83 0 73 chr2 94544583 94544692 -156143162 + (CAGC)n Simple_repeat Simple_repeat 3 103 0 875 89 0 59 chr2 94544706 94545187 -156142667 + (CAGC)n Simple_repeat Simple_repeat 1 452 0 566 90 0 60 chr2 94545205 94545372 -156142482 + (CAGC)n Simple_repeat Simple_repeat 2 158 0 623 104 0 62 chr2 94545856 94546299 -156141555 + (CAGC)n Simple_repeat Simple_repeat 1 415 0 747 69 0 64 chr2 94546360 94546548 -156141306 + (CAGC)n Simple_repeat Simple_repeat 4 179 0 1417 148 0 5 chr2 94546583 94546799 -156141055 + AluSg/x SINE Alu 86 300 -12 1451 140 0 9 chr2 94546799 94547020 -156140834 + AluSg/x SINE Alu 80 298 -12 1463 126 0 9 chr2 94547021 94547235 -156140619 + AluSg/x SINE Alu 82 293 -19 366 88 0 0 chr2 94547235 94547292 -156140562 + Alu SINE Alu 244 300 0 349 60 0 0 chr2 94547299 94547349 -156140505 + AluSq/x SINE Alu 84 133 -170 1755 180 0 3 chr2 94547355 94547650 -156140204 + AluSg SINE Alu 1 294 -16 331 93 0 0 chr2 94547650 94547704 -156140150 + Alu SINE Alu 247 300 0 1652 91 0 14 chr2 94547708 94547927 -156139927 + AluSg/x SINE Alu 80 295 -15 1416 139 5 14 chr2 94547928 94548143 -156139711 + AluSg/x SINE Alu 84 296 -16 1504 139 0 9 chr2 94548143 94548373 -156139481 + AluSg/x SINE Alu 80 307 -3 1313 138 44 10 chr2 94548373 94548576 -156139278 + AluSg/x SINE Alu 83 292 -20 235 148 0 0 chr2 94548576 94548630 -156139224 + Alu SINE Alu 248 301 0 1362 159 4 9 chr2 94548637 94548863 -156138991 + AluSg/x SINE Alu 82 306 -4 * 1368 138 0 9 chr2 94548862 94549103 -156138751 + AluSg/x SINE Alu 82 312 0 1295 167 0 9 chr2 94549103 94549313 -156138541 + AluSg/x SINE Alu 86 293 -19 368 70 0 0 chr2 94549313 94549370 -156138484 + Alu SINE Alu 245 301 0 1422 144 0 14 chr2 94549381 94549596 -156138258 + AluSg/x SINE Alu 82 293 -19 372 88 0 0 chr2 94549596 94549653 -156138201 + Alu SINE Alu 244 300 0 1495 134 0 9 chr2 94549656 94549872 -156137982 + AluSg/x SINE Alu 82 295 -17 332 94 0 0 chr2 94549872 94549925 -156137929 + Alu SINE Alu 245 297 -3 1509 118 0 9 chr2 94549932 94550143 -156137711 + AluSg/x SINE Alu 82 290 -22 350 91 0 0 chr2 94550143 94550198 -156137656 + Alu SINE Alu 246 300 -2 1343 157 0 9 chr2 94550198 94550415 -156137439 + AluSg/x SINE Alu 82 296 -16 282 157 0 0 chr2 94550415 94550466 -156137388 + Alu SINE Alu 247 297 -3 1442 140 0 9 chr2 94550466 94550695 -156137159 + AluSg/x SINE Alu 80 306 -4 1094 157 0 11 chr2 94550696 94550874 -156136980 + AluSg/x SINE Alu 84 259 -53 355 156 0 58 chr2 94550881 94551061 -156136793 + (CAGC)n Simple_repeat Simple_repeat 1 169 0 278 309 94 32 chr2 94551075 94551347 -156136507 - MLT1A2 LTR MaLR -56 334 31 1273 267 32 24 chr2 94552032 94552527 -156135327 + L1MC4a LINE L1 7301 7799 -9 233 268 0 9 chr2 94553135 94553247 -156134607 + (CATA)n Simple_repeat Simple_repeat 4 114 0 192 261 159 0 chr2 94553319 94553388 -156134466 - MIR SINE MIR -119 143 64 1035 254 85 0 chr2 94553409 94553739 -156134115 + MER47A DNA MER2_type 9 366 0 186 43 0 0 chr2 94553786 94553809 -156134045 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 200 396 0 0 chr2 94554235 94554326 -156133528 + (CACG)n Simple_repeat Simple_repeat 4 94 0 1178 212 106 0 chr2 94555095 94555378 -156132476 - L1MB3 LINE L1 -73 6110 5798 866 133 16 0 chr2 94555381 94555509 -156132345 + BC200 scRNA scRNA 14 143 -57 767 232 6 0 chr2 94555509 94555677 -156132177 - L1MB3 LINE L1 -344 5827 5659 456 339 88 45 chr2 94556242 94556275 -156131579 + L1M4 LINE L1 2604 2634 -3512 195 47 23 47 chr2 94556275 94556318 -156131536 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 456 339 88 45 chr2 94556318 94556544 -156131310 + L1M4 LINE L1 2634 2888 -3258 2011 151 0 3 chr2 94556544 94556842 -156131012 + AluSx SINE Alu 1 297 -15 456 339 88 45 chr2 94556842 94556979 -156130875 + L1M4 LINE L1 2888 3018 -3128 281 322 8 0 chr2 94557023 94557144 -156130710 + L1M4 LINE L1 2890 3011 -3135 348 333 85 79 chr2 94557222 94557564 -156130290 + L1M4 LINE L1 3120 3463 -2683 21 0 0 0 chr2 94557988 94558009 -156129845 + AT_rich Low_complexity Low_complexity 1 21 0 1927 78 0 11 chr2 94558009 94558277 -156129577 - L1PA8 LINE L1 -2 6170 5906 28 86 0 0 chr2 94558350 94558420 -156129434 + AT_rich Low_complexity Low_complexity 1 70 0 669 242 51 45 chr2 94558612 94559468 -156128386 + L1MDa LINE L1 1883 2787 -3753 1334 264 42 50 chr2 94559479 94559983 -156127871 + LTR53 LTR ERVL 20 519 0 329 293 56 37 chr2 94560025 94560067 -156127787 + L1MDa LINE L1 2937 2977 -3563 1452 213 22 0 chr2 94560067 94560335 -156127519 + AluJo SINE Alu 1 274 -38 329 293 56 37 chr2 94560335 94560507 -156127347 + L1MDa LINE L1 2977 3155 -3385 207 129 0 0 chr2 94560520 94560551 -156127303 + SUBTEL_sa Satellite Satellite 131 161 -13 1412 191 131 33 chr2 94560982 94561743 -156126111 + TAR1 Satellite telomeric 1032 1867 -244 2556 111 83 11 chr2 94561764 94562232 -156125622 + HSREP522 Satellite telomeric 3 504 0 4662 226 67 9 chr2 94562232 94563522 -156124332 - L1 LINE L1 -1998 4148 2785 841 261 105 33 chr2 94563657 94564009 -156123845 + HSREP522 Satellite telomeric 1 377 -24 183 196 7 54 chr2 94564846 94564994 -156122860 + (CCCTG)n Simple_repeat Simple_repeat 1 141 0 263 181 10 93 chr2 94565002 94565195 -156122659 + (GCCTG)n Simple_repeat Simple_repeat 2 178 0 * 350 192 6 72 chr2 94565093 94565260 -156122594 + (CCCTG)n Simple_repeat Simple_repeat 1 156 0 190 143 41 0 chr2 94565356 94565405 -156122449 + (CCCTAG)n Simple_repeat Simple_repeat 2 52 0 274 194 0 92 chr2 94565466 94565662 -156122192 + (CCCTG)n Simple_repeat Simple_repeat 2 179 0 * 395 263 53 0 chr2 94565637 94565789 -156122065 + (CCCTAG)n Simple_repeat Simple_repeat 1 160 0 374 184 0 72 chr2 94565828 94565980 -156121874 + (CCCTG)n Simple_repeat Simple_repeat 1 141 0 221 125 0 21 chr2 94566063 94566111 -156121743 + (CCCTG)n Simple_repeat Simple_repeat 1 47 0 409 264 48 9 chr2 94566128 94566492 -156121362 + (CCCTAG)n Simple_repeat Simple_repeat 1 377 0 214 145 7 76 chr2 94566568 94566713 -156121141 + (CCCTG)n Simple_repeat Simple_repeat 2 136 0 270 314 29 29 chr2 94566770 94566945 -156120909 + (CCCTAG)n Simple_repeat Simple_repeat 4 178 0 213 103 0 69 chr2 94567057 94567115 -156120739 + (CCCTG)n Simple_repeat Simple_repeat 1 54 0 314 278 59 6 chr2 94567116 94567285 -156120569 + (CCCTAG)n Simple_repeat Simple_repeat 1 178 0 343 290 47 0 chr2 94567371 94567540 -156120314 + (CCCTAG)n Simple_repeat Simple_repeat 3 179 0 410 283 40 0 chr2 94567571 94567723 -156120131 + (CCCTAG)n Simple_repeat Simple_repeat 3 160 0 231 144 0 90 chr2 94567763 94567930 -156119924 + (CCCTG)n Simple_repeat Simple_repeat 5 156 0 296 192 0 96 chr2 94567994 94568192 -156119662 + (CCCTG)n Simple_repeat Simple_repeat 1 179 0 385 281 54 0 chr2 94568376 94568543 -156119311 + (CTAGGG)n Simple_repeat Simple_repeat 2 177 0 341 275 16 77 chr2 94568660 94568842 -156119012 - MIR SINE MIR 0 262 92 735 134 0 17 chr2 94568844 94568963 -156118891 + AluJb SINE Alu 17 133 -179 203 119 0 90 chr2 94569017 94569084 -156118770 + (CAGGG)n Simple_repeat Simple_repeat 1 61 0 389 207 0 67 chr2 94569102 94569281 -156118573 + (CCCTG)n Simple_repeat Simple_repeat 1 167 0 256 213 5 80 chr2 94569253 94569441 -156118413 + (CTCTG)n Simple_repeat Simple_repeat 5 178 0 * 288 127 0 75 chr2 94569547 94569681 -156118173 + (CCCTG)n Simple_repeat Simple_repeat 1 124 0 301 176 0 84 chr2 94569814 94570123 -156117731 + (CCCTG)n Simple_repeat Simple_repeat 1 283 0 384 144 0 69 chr2 94570174 94570347 -156117507 + (CCCTG)n Simple_repeat Simple_repeat 1 161 0 287 127 0 85 chr2 94570476 94570641 -156117213 + (CCCTG)n Simple_repeat Simple_repeat 5 155 0 244 312 48 0 chr2 94570643 94570768 -156117086 + (CCCTAG)n Simple_repeat Simple_repeat 3 133 0 712 182 23 15 chr2 94571201 94571333 -156116521 + AluJo/FLAM SINE Alu 1 133 -169 1484 206 50 17 chr2 94571335 94571691 -156116163 + AluJo SINE Alu 1 366 0 528 133 40 29 chr2 94571790 94571963 -156115891 + (AGATG)n Simple_repeat Simple_repeat 5 179 0 304 365 94 19 chr2 94571965 94572231 -156115623 + L1MEd LINE L1 789 1074 -5045 220 187 38 9 chr2 94572253 94572364 -156115490 + (AGATG)n Simple_repeat Simple_repeat 1 114 0 368 288 85 81 chr2 94572400 94573249 -156114605 + L1ME LINE L1 637 1167 -4903 568 129 71 12 chr2 94573359 94573529 -156114325 + (AAATG)n Simple_repeat Simple_repeat 1 180 0 31 26 0 0 chr2 94573609 94573647 -156114207 + AT_rich Low_complexity Low_complexity 1 38 0 2661 207 28 24 chr2 94574289 94575000 -156112854 - L1 LINE L1 -1549 4597 3884 1853 162 14 22 chr2 94575002 94575367 -156112487 + L1MA5 LINE L1 5642 6003 -297 1463 192 3 7 chr2 94575467 94575775 -156112079 + L1MA5 LINE L1 5987 6293 -7 200 314 0 0 chr2 94576090 94576160 -156111694 + MIR SINE MIR 185 254 -8 2067 146 0 3 chr2 94576327 94576622 -156111232 - AluSx SINE Alu -18 294 1 1826 168 10 26 chr2 94576991 94577294 -156110560 + AluSp SINE Alu 1 298 -15 24 77 0 0 chr2 94577763 94577815 -156110039 + AT_rich Low_complexity Low_complexity 1 52 0 198 0 0 0 chr2 94578417 94578439 -156109415 + (TA)n Simple_repeat Simple_repeat 2 23 0 2311 124 0 0 chr2 94578439 94578738 -156109116 - AluSx SINE Alu -5 307 9 329 299 114 50 chr2 94578952 94579153 -156108701 - L1MEc LINE L1 -4186 2210 1997 348 302 12 29 chr2 94579340 94579512 -156108342 - L1MEc LINE L1 -4858 1538 1370 2576 57 0 0 chr2 94580383 94580681 -156107173 - AluY SINE Alu -13 298 1 224 354 21 0 chr2 94581262 94581358 -156106496 + MIR SINE MIR 41 138 -124 2854 10 0 10 chr2 94581890 94582202 -156105652 - AluYa5 SINE Alu -2 309 1 255 297 16 55 chr2 94583090 94583218 -156104636 + MIR SINE MIR 6 128 -134 668 98 11 0 chr2 94583219 94583311 -156104543 + MLT1B LTR MaLR 1 93 -297 241 191 0 0 chr2 94583307 94583349 -156104505 + MLT1B LTR MaLR 349 390 0 * 286 327 9 28 chr2 94583350 94583457 -156104397 + MIR SINE MIR 126 230 -32 1519 245 83 13 chr2 94583478 94583862 -156103992 - MLT1E2 LTR MaLR -1 625 215 670 196 0 21 chr2 94583870 94584013 -156103841 - FLAM_C SINE Alu 0 143 4 447 202 14 170 chr2 94584021 94584239 -156103615 - MLT1E2 LTR MaLR -442 184 1 288 0 0 0 chr2 94584596 94584628 -156103226 + (CA)n Simple_repeat Simple_repeat 2 33 0 434 281 97 38 chr2 94584743 94584928 -156102926 - MIR SINE MIR -7 255 60 2662 153 17 4 chr2 94585091 94585556 -156102298 + L1MB3 LINE L1 5713 6183 0 458 283 151 40 chr2 94586304 94586707 -156101147 - L1 LINE L1 -768 5378 4931 1745 150 3 51 chr2 94586725 94587039 -156100815 - AluJo SINE Alu -9 303 5 922 318 85 29 chr2 94587206 94588089 -156099765 - L1 LINE L1 -2983 3163 2232 337 169 0 42 chr2 94588939 94589010 -156098844 - MLT1I LTR MaLR -262 147 80 329 221 13 13 chr2 94589073 94589150 -156098704 - HAL1 LINE L1 -853 1654 1578 1982 194 29 3 chr2 94589556 94589942 -156097912 + MSTD LTR MaLR 1 396 0 204 267 33 0 chr2 94590580 94590640 -156097214 - L2 LINE L2 -1 3271 3210 809 283 75 19 chr2 94592879 94593187 -156094667 + L1MDa LINE L1 20 344 -6196 2420 194 51 59 chr2 94593365 94593546 -156094308 + L1MDa LINE L1 1553 1734 -4806 2226 109 0 13 chr2 94593546 94593848 -156094006 + AluSx SINE Alu 1 298 -14 2420 194 51 59 chr2 94593848 94594397 -156093457 + L1MDa LINE L1 1734 2277 -4263 6430 209 64 29 chr2 94594397 94594496 -156093358 - L1MDa LINE L1 -2952 3588 3494 2242 105 0 3 chr2 94594496 94594792 -156093062 - AluSx SINE Alu -15 297 3 6430 209 64 29 chr2 94594792 94595850 -156092004 - L1MDa LINE L1 -3046 3494 2474 2407 111 43 6 chr2 94595850 94596201 -156091653 - THE1B LTR MaLR 0 364 1 6430 209 64 29 chr2 94596201 94596460 -156091394 - L1MDa LINE L1 -4066 2474 2225 1824 155 57 35 chr2 94596460 94596827 -156091027 + THE1C LTR MaLR 1 375 0 6430 209 64 29 chr2 94596827 94598544 -156089310 - L1MDa LINE L1 -4315 2225 35 2248 79 0 0 chr2 94598593 94598873 -156088981 + AluY SINE Alu 24 303 -8 6218 94 9 12 chr2 94599317 94600182 -156087672 + L1PA11 LINE L1 5310 6172 -2 444 176 33 0 chr2 94600184 94600275 -156087579 + FAM SINE Alu 86 179 -6 197 313 68 82 chr2 94600777 94601215 -156086639 + L3 LINE CR1 1142 1573 -4 316 219 25 76 chr2 94601794 94601827 -156086027 - MIR SINE MIR -73 189 156 2449 87 3 0 chr2 94601827 94602126 -156085728 - AluSp SINE Alu -13 300 1 316 219 25 76 chr2 94602126 94602211 -156085643 - MIR SINE MIR -106 156 77 555 14 0 29 chr2 94602409 94602479 -156085375 + L1P4 LINE L1 5651 5718 -450 262 250 0 0 chr2 94602470 94602542 -156085312 - L1ME3A LINE L1 -71 6099 6028 * 391 219 97 18 chr2 94602558 94602672 -156085182 - L1ME3A LINE L1 -192 5970 5848 274 204 148 0 chr2 94602719 94602807 -156085047 + MER63 DNA MER1_type 44 752 -310 394 175 0 21 chr2 94603352 94603449 -156084405 + GA-rich Low_complexity Low_complexity 1 95 0 6513 125 54 8 chr2 94603606 94604677 -156083177 - Tigger3b DNA MER2_type 0 1231 111 448 131 0 0 chr2 94604959 94605020 -156082834 - Tigger3(Golem) DNA MER2_type -52 2977 2917 * 478 202 0 20 chr2 94605009 94605108 -156082746 - Tigger3(Golem) DNA MER2_type -2912 117 21 258 279 13 25 chr2 94605838 94605917 -156081937 + MIR SINE MIR 20 97 -165 228 330 56 39 chr2 94606271 94606504 -156081350 - L1ME3A LINE L1 -345 5776 5540 222 206 0 0 chr2 94606757 94606820 -156081034 + A-rich Low_complexity Low_complexity 1 63 0 1656 178 9 52 chr2 94607450 94607793 -156080061 + MLT1B LTR MaLR 63 390 0 3013 105 12 0 chr2 94608263 94608683 -156079171 - MSTA LTR MaLR -2 426 2 1214 221 17 13 chr2 94608738 94609037 -156078817 + L1M4 LINE L1 3770 4069 -2077 2017 150 3 0 chr2 94609166 94609459 -156078395 + AluSx SINE Alu 1 294 -18 320 231 46 65 chr2 94610025 94610133 -156077721 + LTR48B LTR ERV1 1 106 -538 * 1130 236 45 84 chr2 94610100 94610414 -156077440 + MER39 LTR ERV1 260 552 -155 2075 151 3 0 chr2 94610414 94610725 -156077129 - AluSx SINE Alu 0 312 1 1130 236 45 84 chr2 94610725 94610876 -156076978 + MER39 LTR ERV1 552 707 0 1014 163 5 5 chr2 94611541 94611725 -156076129 - LTR37A LTR ERV1 -21 405 222 1666 77 5 0 chr2 94612265 94612474 -156075380 + AluY SINE Alu 102 311 0 1997 207 97 7 chr2 94612657 94613120 -156074734 + MLT1D LTR MaLR 1 505 0 3032 148 30 4 chr2 94614303 94614777 -156073077 - MER66B LTR ERV1 0 486 1 336 283 24 8 chr2 94616016 94616150 -156071704 - MLT1J LTR MaLR -5 597 389 1881 198 25 14 chr2 94618729 94619097 -156068757 + MLT1C LTR MaLR 1 372 -95 7947 120 35 25 chr2 94619135 94619485 -156068369 + HSMAR2 DNA Mariner 2 347 -955 2182 107 3 39 chr2 94619485 94619795 -156068059 + AluSx SINE Alu 1 299 -13 7947 120 35 25 chr2 94619795 94620732 -156067122 + HSMAR2 DNA Mariner 347 1302 0 1893 197 60 26 chr2 94621216 94621668 -156066186 + MLT1C LTR MaLR 1 467 0 677 129 0 7 chr2 94625008 94625148 -156062706 + (TG)n Simple_repeat Simple_repeat 2 140 0 207 189 0 0 chr2 94625212 94625265 -156062589 + (TG)n Simple_repeat Simple_repeat 2 54 0 243 215 0 51 chr2 94625413 94625492 -156062362 - L2 LINE L2 -6 3266 3192 491 289 60 0 chr2 94625592 94625758 -156062096 - MLT1I LTR MaLR -2 407 232 724 223 12 8 chr2 94625847 94626016 -156061838 - MIR SINE MIR -67 141 10 2540 86 0 3 chr2 94627316 94627630 -156060224 + AluSp SINE Alu 1 313 0 223 191 24 0 chr2 94628053 94628095 -156059759 - L2 LINE L2 -25 3247 3205 1313 237 37 59 chr2 94628218 94628593 -156059261 - MLT1A2 LTR MaLR 0 374 8 350 280 241 21 chr2 94628726 94629211 -156058643 - L2 LINE L2 -343 2971 2380 2762 139 59 49 chr2 94629223 94629520 -156058334 + MLT2B1 LTR ERVL 1 307 -213 2513 124 6 3 chr2 94629520 94629883 -156057971 + THE1B LTR MaLR 1 364 0 2762 139 59 49 chr2 94629883 94630097 -156057757 + MLT2B1 LTR ERVL 307 517 -3 8193 124 10 10 chr2 94631235 94632471 -156055383 - Tigger1 DNA MER2_type 0 2418 1183 212 0 0 35 chr2 94632479 94632508 -156055346 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 17032 26 15 0 chr2 94632508 94635264 -156052590 - L1PA4 LINE L1 -12 6143 3357 4544 28 0 5 chr2 94635264 94635829 -156052025 + L1PA4 LINE L1 2798 3359 -2787 7008 118 54 12 chr2 94635836 94636116 -156051738 - Tigger1 DNA MER2_type -1245 1173 906 2156 99 16 23 chr2 94636116 94636419 -156051435 - AluSq SINE Alu -12 301 1 7008 118 54 12 chr2 94636419 94637241 -156050613 - Tigger1 DNA MER2_type -1512 906 24 703 265 101 48 chr2 94637923 94638281 -156049573 + MLT1J LTR MaLR 86 462 -49 373 316 0 0 chr2 94638485 94638580 -156049274 - MER91B DNA MER1_type 0 190 96 310 0 43 22 chr2 94639473 94639519 -156048335 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 461 280 37 26 chr2 94640062 94640251 -156047603 + MARNA DNA Mariner 288 478 -108 2129 104 4 0 chr2 94641012 94641291 -156046563 + AluSx SINE Alu 9 288 -24 533 241 72 6 chr2 94641327 94641493 -156046361 + MER45A DNA AcHobo 2 178 0 461 231 31 31 chr2 94642679 94642809 -156045045 + MER103 DNA DNA 25 154 -12 2375 122 42 28 chr2 94642886 94643312 -156044542 - L1MA8 LINE L1 0 6291 5860 285 326 108 16 chr2 94643388 94643579 -156044275 + MIR SINE MIR 21 227 -35 3361 172 89 22 chr2 94643684 94644358 -156043496 - LTR62 LTR ERVK 0 719 1 33 43 0 0 chr2 94644894 94644941 -156042913 + AT_rich Low_complexity Low_complexity 1 47 0 2260 105 3 7 chr2 94645849 94646153 -156041701 - AluSx SINE Alu -9 303 1 244 133 0 0 chr2 94646179 94646224 -156041630 + L1MA6 LINE L1 6256 6300 0 943 279 22 9 chr2 94647139 94647465 -156040389 - L1ME2 LINE L1 -140 6026 5712 364 214 205 0 chr2 94647936 94648048 -156039806 - MIR SINE MIR -66 196 62 1767 268 103 13 chr2 94648140 94649149 -156038705 - L2 LINE L2 -38 3275 2172 1716 77 5 5 chr2 94649435 94649657 -156038197 + AluSp SINE Alu 85 306 -7 1650 245 42 53 chr2 94649910 94650184 -156037670 - L1MEc LINE L1 -5178 1218 942 2232 119 0 3 chr2 94650184 94650486 -156037368 + AluSq SINE Alu 11 311 -2 1650 245 42 53 chr2 94650486 94650831 -156037023 - L1MEc LINE L1 -5454 942 606 242 254 140 0 chr2 94650840 94650954 -156036900 - L2 LINE L2 -2507 807 678 1035 115 0 16 chr2 94650970 94651061 -156036793 + (TCCC)n Simple_repeat Simple_repeat 1 269 0 1035 115 0 16 chr2 94651061 94651244 -156036610 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 736 211 50 107 chr2 94651323 94651466 -156036388 + L1MC4 LINE L1 7636 7786 -256 2064 125 31 0 chr2 94651466 94651755 -156036099 + AluSx SINE Alu 1 298 -14 736 211 50 107 chr2 94651755 94651948 -156035906 + L1MC4 LINE L1 7786 7953 -89 3481 189 33 10 chr2 94652730 94653403 -156034451 + L1MB7 LINE L1 5481 6168 -16 1043 279 90 32 chr2 94653934 94654457 -156033397 - L1MC4a LINE L1 -1770 6038 5486 263 135 0 33 chr2 94654457 94654512 -156033342 + Alu SINE Alu 2 41 -258 1616 224 49 30 chr2 94654534 94654572 -156033282 + MER63B DNA MER1_type 1 37 -1025 216 0 0 0 chr2 94654572 94654596 -156033258 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 1616 224 49 30 chr2 94654596 94654985 -156032869 + MER63B DNA MER1_type 37 436 0 282 264 172 17 chr2 94654991 94655165 -156032689 - L1MC4a LINE L1 -2342 5466 5266 180 111 0 0 chr2 94655254 94655281 -156032573 + (T)n Simple_repeat Simple_repeat 1 27 0 2277 93 0 40 chr2 94655345 94655666 -156032188 - AluSx SINE Alu -4 308 1 1641 206 79 3 chr2 94656061 94656429 -156031425 - MSTD LTR MaLR 0 396 1 204 143 0 48 chr2 94656854 94656896 -156030958 + MIR SINE MIR 209 248 -14 309 293 210 0 chr2 94657140 94657307 -156030547 - MIR SINE MIR -1 261 60 180 0 0 0 chr2 94658124 94658144 -156029710 + (A)n Simple_repeat Simple_repeat 1 20 0 2845 68 3 3 chr2 94658389 94658744 -156029110 - THE1A LTR MaLR 0 355 1 11672 97 11 2 chr2 94658744 94660309 -156027545 - THE1A-int LTR MaLR 0 1580 1 2578 76 35 3 chr2 94660309 94660653 -156027201 - THE1A LTR MaLR 0 355 1 202 139 0 23 chr2 94661737 94661780 -156026074 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 403 304 98 10 chr2 94662086 94662290 -156025564 + MIR SINE MIR 41 262 0 261 0 0 0 chr2 94662301 94662330 -156025524 + (CAT)n Simple_repeat Simple_repeat 1 29 0 1626 182 0 7 chr2 94662800 94663069 -156024785 + AluJb SINE Alu 1 267 -45 297 100 0 0 chr2 94663083 94663133 -156024721 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 854 219 12 0 chr2 94663185 94663444 -156024410 - FRAM SINE Alu 0 262 2 243 242 0 0 chr2 94663829 94663891 -156023963 + (TG)n Simple_repeat Simple_repeat 2 63 0 286 316 23 35 chr2 94663900 94664074 -156023780 - L2 LINE L2 -291 3022 2851 871 160 67 5 chr2 94665781 94665975 -156021879 + L1MD1 LINE L1 1864 2069 -4471 824 215 68 32 chr2 94665991 94666270 -156021584 + L1MD1 LINE L1 2111 2399 -4141 * 5221 199 55 18 chr2 94666245 94667391 -156020463 + L1MC3 LINE L1 6983 8171 -8 1672 151 8 4 chr2 94667401 94667659 -156020195 + AluSx SINE Alu 33 291 -21 4358 195 47 40 chr2 94667668 94667907 -156019947 + L1MD1 LINE L1 5403 5639 -997 2267 71 50 0 chr2 94667907 94668189 -156019665 - AluSc SINE Alu -13 296 1 4358 195 47 40 chr2 94668189 94669009 -156018845 + L1MD1 LINE L1 5639 6475 -161 2238 108 3 10 chr2 94669009 94669323 -156018531 - AluSx SINE Alu 0 312 1 4358 195 47 40 chr2 94669323 94669487 -156018367 + L1MD1 LINE L1 6475 6636 0 635 120 0 0 chr2 94669836 94669928 -156017926 + AluS SINE Alu 2 93 -220 2056 146 143 11 chr2 94669949 94670327 -156017527 - MSTA LTR MaLR 0 428 1 522 192 85 15 chr2 94670327 94670457 -156017397 - LTR54 LTR ERV1 -335 175 37 912 213 170 13 chr2 94671670 94672033 -156015821 - MER63 DNA MER1_type -7 1053 6 21 0 0 0 chr2 94672056 94672077 -156015777 + AT_rich Low_complexity Low_complexity 1 21 0 1391 202 6 47 chr2 94672103 94672425 -156015429 - AluJo SINE Alu -3 309 1 701 135 115 20 chr2 94673190 94673338 -156014516 + MIR SINE MIR 60 221 -41 283 226 155 0 chr2 94673448 94673532 -156014322 - MIR SINE MIR -61 147 51 2386 158 116 0 chr2 94673901 94674325 -156013529 - MER101 LTR ERV1 -1 473 1 26 50 0 0 chr2 94675839 94675879 -156011975 + AT_rich Low_complexity Low_complexity 1 40 0 1611 158 71 63 chr2 94676126 94676493 -156011361 - MLT1A2 LTR MaLR 0 374 5 510 261 0 0 chr2 94678202 94678313 -156009541 + MIR SINE MIR 60 170 -92 1200 281 72 38 chr2 94678691 94679175 -156008679 - L1ME3A LINE L1 -272 5898 5432 1743 85 16 8 chr2 94679175 94679433 -156008421 - L1MA2 LINE L1 0 6304 6045 1200 281 72 38 chr2 94679433 94679741 -156008113 - L1ME3A LINE L1 -738 5432 5136 1955 111 201 8 chr2 94679741 94680100 -156007754 - MSTA LTR MaLR 0 428 1 1200 281 72 38 chr2 94680100 94680727 -156007127 - L1ME3A LINE L1 -1034 5136 4418 911 187 0 0 chr2 94680739 94680915 -156006939 - FRAM SINE Alu 0 174 1 339 277 182 6 chr2 94680927 94680963 -156006891 - L1ME3A LINE L1 -1744 4402 4374 1977 103 0 55 chr2 94680963 94681274 -156006580 + AluSx SINE Alu 3 296 -16 339 277 182 6 chr2 94681274 94681396 -156006458 - L1ME3A LINE L1 -1772 4374 4216 309 339 8 16 chr2 94681398 94681522 -156006332 + MIR SINE MIR 140 262 0 353 331 25 38 chr2 94681549 94681709 -156006145 - MIR3 SINE MIR -32 176 19 195 253 133 13 chr2 94683101 94683176 -156004678 - L2 LINE L2 -5 3308 3225 183 42 0 0 chr2 94684228 94684252 -156003602 + (TTA)n Simple_repeat Simple_repeat 2 25 0 709 253 45 41 chr2 94684671 94684916 -156002938 - MIR SINE MIR 0 262 17 2231 103 0 10 chr2 94686059 94686371 -156001483 + AluSc SINE Alu 1 309 0 637 230 14 34 chr2 94687414 94687562 -156000292 - MIR SINE MIR -51 211 67 2435 157 24 12 chr2 94687709 94687901 -155999953 + MSTB1 LTR MaLR 2 190 -242 1769 96 0 42 chr2 94687901 94688162 -155999692 + AluSx SINE Alu 54 303 -9 2435 157 24 12 chr2 94688162 94688395 -155999459 + MSTB1 LTR MaLR 190 432 0 708 214 48 40 chr2 94689392 94689644 -155998210 - L1MC5 LINE L1 -36 7925 7672 685 124 86 0 chr2 94692850 94692955 -155994899 + AluSq/x SINE Alu 2 115 -197 36 0 0 0 chr2 94692955 94692991 -155994863 + AT_rich Low_complexity Low_complexity 1 36 0 210 311 108 0 chr2 94693272 94693346 -155994508 + L2 LINE L2 3188 3269 -3 198 0 0 0 chr2 94694675 94694697 -155993157 + (T)n Simple_repeat Simple_repeat 1 22 0 32 57 0 0 chr2 94696520 94696573 -155991281 + AT_rich Low_complexity Low_complexity 1 53 0 23 0 0 0 chr2 94696882 94696905 -155990949 + AT_rich Low_complexity Low_complexity 1 23 0 422 248 21 14 chr2 94696938 94697083 -155990771 + L1M4 LINE L1 4980 5125 -1021 1975 106 7 0 chr2 94697115 94697389 -155990465 + AluSx SINE Alu 1 276 -36 225 0 0 0 chr2 94697395 94697420 -155990434 + (TAA)n Simple_repeat Simple_repeat 2 26 0 1843 152 7 7 chr2 94698457 94698760 -155989094 + AluJb SINE Alu 1 303 -9 198 0 0 0 chr2 94698984 94699006 -155988848 + (TG)n Simple_repeat Simple_repeat 1 22 0 432 200 24 0 chr2 94699195 94699280 -155988574 + MER5A DNA MER1_type 26 112 -77 430 278 190 10 chr2 94700688 94700893 -155986961 - MLT1J2 LTR MaLR -3 447 206 379 225 85 31 chr2 94701755 94701884 -155985970 + MIR SINE MIR 47 182 -80 280 295 21 0 chr2 94704305 94704400 -155983454 + L2 LINE L2 3216 3312 -1 6303 41 0 4 chr2 94705158 94705908 -155981946 - L1PA5 LINE L1 0 6154 5408 797 272 15 20 chr2 94706654 94706980 -155980874 + MER34C LTR ERV1 63 430 -155 2138 116 0 3 chr2 94707898 94708208 -155979646 - AluSq SINE Alu -4 309 1 346 239 82 44 chr2 94708985 94709144 -155978710 - MIR3 SINE MIR -41 167 3 182 303 101 0 chr2 94709685 94709774 -155978080 + L2 LINE L2 2960 3057 -215 276 30 0 0 chr2 94710588 94710621 -155977233 + (TA)n Simple_repeat Simple_repeat 1 33 0 1190 204 55 16 chr2 94710982 94711288 -155976566 - MLT1D LTR MaLR 0 505 206 272 326 30 15 chr2 94711517 94711649 -155976205 - MIR SINE MIR -126 136 3 255 358 114 0 chr2 94712434 94712557 -155975297 + MIR SINE MIR 48 184 -78 369 265 29 0 chr2 94712873 94712975 -155974879 + MLT2C1 LTR ERVL 2 106 -291 300 293 30 0 chr2 94713009 94713108 -155974746 + MLT2C1 LTR ERVL 237 338 -59 4851 175 22 29 chr2 94713120 94714048 -155973806 + MER49 LTR ERV1 1 921 -2 276 30 0 0 chr2 94714060 94714093 -155973761 + (CA)n Simple_repeat Simple_repeat 2 34 0 878 244 0 0 chr2 94714093 94714280 -155973574 + ERVL LTR ERVL 1003 1189 -4575 361 152 19 0 chr2 94714282 94714387 -155973467 + (TTGG)n Simple_repeat Simple_repeat 1 107 0 3122 266 35 1 chr2 94714396 94715204 -155972650 + ERVL LTR ERVL 1180 2014 -3750 639 192 0 0 chr2 94715205 94715309 -155972545 - FLAM_C SINE Alu -38 105 2 1972 100 22 59 chr2 94715393 94715571 -155972283 - AluSg SINE Alu -1 309 147 2190 93 0 22 chr2 94715571 94715882 -155971972 - AluY SINE Alu -7 304 1 1972 100 22 59 chr2 94715882 94716024 -155971830 - AluSg SINE Alu -163 147 1 216 0 0 0 chr2 94716446 94716470 -155971384 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1871 153 0 0 chr2 94716531 94716819 -155971035 - AluSx SINE Alu -24 288 1 232 56 0 0 chr2 94716823 94716859 -155970995 - L1PA12 LINE L1 -134 6034 5999 1806 159 7 99 chr2 94716859 94717000 -155970854 + L1PA16 LINE L1 5769 5921 -245 3170 106 2 2 chr2 94717000 94717444 -155970410 - L1PA7 LINE L1 -3 6151 5708 1806 159 7 99 chr2 94717444 94717716 -155970138 + L1PA16 LINE L1 5921 6144 -22 1681 149 0 67 chr2 94717721 94717812 -155970042 + L1PA16 LINE L1 5611 5707 -459 2025 101 7 0 chr2 94717812 94718089 -155969765 - AluSx SINE Alu -11 301 23 1681 149 0 67 chr2 94718089 94718326 -155969528 + L1PA16 LINE L1 5707 5917 -249 892 160 6 6 chr2 94718329 94718485 -155969369 + L1PA16 LINE L1 5763 5918 -248 929 170 0 6 chr2 94718486 94718645 -155969209 + L1PA16 LINE L1 5762 5919 -247 887 150 12 12 chr2 94718645 94718805 -155969049 + L1PA16 LINE L1 5762 5921 -245 * 1461 184 0 11 chr2 94718799 94719077 -155968777 + L1PA16 LINE L1 5759 6033 -133 2292 99 0 0 chr2 94719186 94719489 -155968365 - AluSx SINE Alu -9 303 1 572 186 0 0 chr2 94719622 94719759 -155968095 + L1PA16 LINE L1 6040 6176 0 260 188 0 12 chr2 94720812 94720897 -155966957 + (TG)n Simple_repeat Simple_repeat 1 84 0 304 326 6 6 chr2 94720913 94721085 -155966769 + (TG)n Simple_repeat Simple_repeat 1 172 0 1175 137 0 0 chr2 94721097 94721265 -155966589 - AluSg/x SINE Alu -11 301 134 2282 98 0 3 chr2 94721265 94721560 -155966294 - AluSx SINE Alu -18 294 1 416 288 0 6 chr2 94721563 94721726 -155966128 + (TG)n Simple_repeat Simple_repeat 2 163 0 388 275 7 0 chr2 94721867 94722005 -155965849 + (TG)n Simple_repeat Simple_repeat 2 140 0 23 0 0 0 chr2 94722324 94722347 -155965507 + AT_rich Low_complexity Low_complexity 1 23 0 235 237 14 36 chr2 94722347 94722486 -155965368 + (TA)n Simple_repeat Simple_repeat 1 136 0 283 275 31 6 chr2 94722552 94722712 -155965142 + (TA)n Simple_repeat Simple_repeat 2 165 0 183 188 0 0 chr2 94722740 94722788 -155965066 + (TG)n Simple_repeat Simple_repeat 2 49 0 22 56 0 0 chr2 94722891 94722927 -155964927 + AT_rich Low_complexity Low_complexity 1 36 0 27 0 0 0 chr2 94723151 94723178 -155964676 + AT_rich Low_complexity Low_complexity 1 27 0 33 94 0 0 chr2 94723815 94723911 -155963943 + AT_rich Low_complexity Low_complexity 1 96 0 261 259 40 11 chr2 94723917 94724091 -155963763 + (TA)n Simple_repeat Simple_repeat 1 179 0 35 41 0 0 chr2 94724096 94724145 -155963709 + AT_rich Low_complexity Low_complexity 1 49 0 239 284 6 25 chr2 94724154 94724316 -155963538 + (TTATA)n Simple_repeat Simple_repeat 1 159 0 229 289 13 26 chr2 94728013 94728089 -155959765 + tRNA-Ala-GCG tRNA tRNA 1 75 0 1941 167 50 19 chr2 94731858 94732236 -155955618 - MLT1B LTR MaLR 0 390 1 1674 162 43 40 chr2 94732274 94732577 -155955277 + AluJo SINE Alu 1 304 -8 366 23 0 0 chr2 94733228 94733271 -155954583 + (TA)n Simple_repeat Simple_repeat 2 44 0 2418 97 0 3 chr2 94733271 94733581 -155954273 - AluSx SINE Alu -3 309 1 473 284 32 13 chr2 94733773 94733928 -155953926 + MIR SINE MIR 33 190 -72 294 303 118 26 chr2 94734307 94734535 -155953319 - L3 LINE CR1 -380 1197 949 955 170 18 12 chr2 94734581 94734752 -155953102 + AluJb SINE Alu 116 287 -25 191 32 65 0 chr2 94734755 94734786 -155953068 + A-rich Low_complexity Low_complexity 2 34 0 348 24 0 0 chr2 94734787 94734828 -155953026 + (CA)n Simple_repeat Simple_repeat 2 42 0 292 41 61 0 chr2 94734865 94734914 -155952940 + T-rich Low_complexity Low_complexity 5 56 0 2416 95 3 0 chr2 94734946 94735250 -155952604 - AluSx SINE Alu -7 305 1 1730 180 73 32 chr2 94735545 94735737 -155952117 + MLT2D LTR ERVL 1 184 -280 2591 74 0 0 chr2 94735737 94736047 -155951807 + AluY SINE Alu 1 310 -1 1730 180 73 32 chr2 94736047 94736322 -155951532 + MLT2D LTR ERVL 184 464 0 212 227 93 40 chr2 94738365 94738440 -155949414 + MIR SINE MIR 91 169 -93 1485 146 15 131 chr2 94740174 94740510 -155947344 + AluJo SINE Alu 2 298 -4 188 275 341 0 chr2 94741754 94741845 -155946009 - L2 LINE L2 -13 3259 3138 383 223 134 18 chr2 94741999 94742111 -155945743 - MIR SINE MIR -131 131 7 2359 100 0 3 chr2 94742336 94742637 -155945217 - AluSx SINE Alu -12 300 1 2170 138 30 53 chr2 94743423 94743600 -155944254 + MLT1B LTR MaLR 1 180 -210 735 54 0 0 chr2 94743600 94743693 -155944161 + L1PA5 LINE L1 6062 6154 0 2170 138 30 53 chr2 94743693 94743912 -155943942 + MLT1B LTR MaLR 180 388 -2 2646 52 0 0 chr2 94745638 94745946 -155941908 + AluY SINE Alu 1 308 -3 502 304 62 18 chr2 94745946 94746173 -155941681 - MLT1K LTR MaLR -12 576 340 2373 86 0 13 chr2 94746891 94747206 -155940648 - AluY SINE Alu 0 311 1 2717 139 68 21 chr2 94747329 94747861 -155939993 + L1MA8 LINE L1 5732 6288 -3 36 23 0 0 chr2 94749100 94749143 -155938711 + AT_rich Low_complexity Low_complexity 1 43 0 207 0 0 0 chr2 94750785 94750808 -155937046 + (A)n Simple_repeat Simple_repeat 1 23 0 1537 151 7 18 chr2 94753682 94753966 -155933888 + L1MB3 LINE L1 5902 6182 -1 2061 135 0 24 chr2 94756500 94756796 -155931058 - AluSx SINE Alu -23 289 1 215 224 0 20 chr2 94757047 94757096 -155930758 + CT-rich Low_complexity Low_complexity 6 53 0 2374 100 0 0 chr2 94757205 94757504 -155930350 + AluSg SINE Alu 1 299 -11 224 339 25 8 chr2 94759230 94759348 -155928506 - L2 LINE L2 -15 3257 3138 1245 178 0 0 chr2 94759595 94759792 -155928062 + MER2 DNA MER2_type 2 198 -147 307 229 57 0 chr2 94759821 94759891 -155927963 + MER2 DNA MER2_type 264 337 -8 2448 76 0 3 chr2 94762885 94763188 -155924666 + AluSx SINE Alu 1 302 -10 252 0 0 0 chr2 94763830 94763858 -155923996 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 2234 93 6 6 chr2 94767319 94767630 -155920224 - AluY SINE Alu 0 311 1 286 228 53 0 chr2 94767734 94767791 -155920063 - L2 LINE L2 0 3272 3213 1487 218 122 64 chr2 94767924 94768392 -155919462 - MLT1F LTR MaLR -47 495 1 341 292 101 57 chr2 94768556 94768765 -155919089 - MLT1J LTR MaLR -191 320 103 373 225 25 0 chr2 94768843 94768923 -155918931 + MLT1F LTR MaLR 414 495 -47 539 295 170 0 chr2 94769593 94769793 -155918061 + MIR SINE MIR 13 246 -16 330 171 0 0 chr2 94769807 94769877 -155917977 + (ATG)n Simple_repeat Simple_repeat 2 71 0 1115 79 0 0 chr2 94770309 94770449 -155917405 + AluSq/x SINE Alu 1 140 -172 965 131 7 0 chr2 94770685 94770830 -155917024 + AluSg/x SINE Alu 159 304 -6 403 212 50 20 chr2 94771159 94771258 -155916596 - L2 LINE L2 -2 3311 3210 264 243 45 65 chr2 94771909 94772080 -155915774 + L1ME4a LINE L1 5838 6050 -71 2273 94 3 0 chr2 94772080 94772379 -155915475 + AluSg SINE Alu 1 300 -10 264 243 45 65 chr2 94772379 94772449 -155915405 + L1ME4a LINE L1 6050 6120 -1 202 163 47 0 chr2 94772658 94772701 -155915153 + A-rich Low_complexity Low_complexity 4 48 0 294 281 80 45 chr2 94773119 94773318 -155914536 - MLT1J LTR MaLR 0 511 306 * 395 246 35 56 chr2 94773308 94773450 -155914404 - MLT1J LTR MaLR -369 142 4 1803 156 3 7 chr2 94773960 94774261 -155913593 + AluJo SINE Alu 5 304 -8 1968 152 62 5 chr2 94774269 94774637 -155913217 - L1MB5 LINE L1 -13 6161 5773 203 296 0 42 chr2 94775256 94775327 -155912527 - MIR SINE MIR -89 173 106 727 294 62 64 chr2 94776141 94776638 -155911216 + MLT1J LTR MaLR 3 498 -13 224 246 97 66 chr2 94776771 94776937 -155910917 - MIR SINE MIR -12 250 85 1076 291 248 23 chr2 94778054 94778814 -155909040 + L2 LINE L2 1733 2321 -992 1887 153 10 0 chr2 94778814 94779122 -155908732 + AluJb SINE Alu 1 311 -1 1076 291 248 23 chr2 94779122 94779649 -155908205 + L2 LINE L2 2321 3313 0 200 276 164 26 chr2 94779909 94780025 -155907829 - MIR SINE MIR 0 262 131 1722 234 103 54 chr2 94780034 94780435 -155907419 - MLT1E3 LTR MaLR -1 623 182 1444 171 148 0 chr2 94780435 94780698 -155907156 - AluJb SINE Alu 0 302 1 1722 234 103 54 chr2 94780698 94780886 -155906968 - MLT1E3 LTR MaLR -442 182 5 447 283 33 8 chr2 94780890 94781010 -155906844 - MIR SINE MIR -139 123 1 196 29 29 29 chr2 94781416 94781428 -155906426 + (TGGA)n Simple_repeat Simple_repeat 3 14 -22 665 269 19 28 chr2 94781428 94781640 -155906214 - MER63A DNA MER1_type 0 210 1 196 29 29 29 chr2 94781640 94781661 -155906193 + (TGGA)n Simple_repeat Simple_repeat 13 36 0 2548 220 70 29 chr2 94782227 94782579 -155905275 + L1MD2 LINE L1 4495 4831 -1528 1872 159 0 0 chr2 94782579 94782874 -155904980 - AluSx SINE Alu -17 295 1 2548 220 70 29 chr2 94782874 94783799 -155904055 + L1MD2 LINE L1 4831 5826 -533 1600 240 159 18 chr2 94783966 94784594 -155903260 + L2 LINE L2 1499 2215 -1099 413 165 0 24 chr2 94784600 94784685 -155903169 - HsTC2 DNA Tc2 -12 1886 1804 1901 111 31 3 chr2 94784697 94784985 -155902869 - AluSg SINE Alu -14 296 1 255 274 68 0 chr2 94785232 94785305 -155902549 + MER91C DNA MER1_type 60 137 -3 1902 178 80 10 chr2 94785353 94785753 -155902101 - MSTC LTR MaLR 0 428 1 436 330 128 0 chr2 94786660 94786863 -155900991 + MIR SINE MIR 7 235 -27 397 274 28 0 chr2 94791982 94792088 -155895766 + MIR SINE MIR 94 202 -60 276 130 0 0 chr2 94792338 94792384 -155895470 + (CAT)n Simple_repeat Simple_repeat 2 47 0 503 208 19 88 chr2 94793871 94794030 -155893824 - MLT1J LTR MaLR -140 371 224 663 293 29 15 chr2 94794723 94794928 -155892926 + MIR SINE MIR 36 243 -19 549 257 65 101 chr2 94795265 94795603 -155892251 + MLT1J LTR MaLR 23 348 -163 672 235 115 65 chr2 94795788 94796048 -155891806 + ORSL DNA AcHobo 1 273 -2 1003 214 10 0 chr2 94797006 94797212 -155890642 + MER3 DNA MER1_type 1 208 -1 700 278 51 5 chr2 94798062 94798278 -155889576 + MIR SINE MIR 34 259 -3 200 258 65 0 chr2 94798691 94798753 -155889101 + MIR SINE MIR 34 99 -163 185 360 44 22 chr2 94798940 94799076 -155888778 - L3 LINE CR1 -140 1437 1299 2508 17 0 3 chr2 94799231 94799523 -155888331 - AluYa5 SINE Alu -1 310 20 212 319 17 42 chr2 94799692 94799811 -155888043 - L3 LINE CR1 -607 970 855 1492 143 8 26 chr2 94799831 94800096 -155887758 - AluJo SINE Alu -25 287 28 318 326 91 8 chr2 94800220 94800352 -155887502 - L3 LINE CR1 -865 712 570 229 222 202 20 chr2 94801525 94801624 -155886230 - MIR SINE MIR -90 172 56 1426 170 0 4 chr2 94802170 94802435 -155885419 - AluJb SINE Alu 0 306 43 34 0 0 0 chr2 94802971 94803005 -155884849 + AT_rich Low_complexity Low_complexity 1 34 0 1428 186 22 82 chr2 94803716 94804131 -155883723 + MLT1B LTR MaLR 1 390 0 311 229 46 37 chr2 94805585 94805694 -155882160 - L1ME4a LINE L1 -56 6065 5956 217 241 11 11 chr2 94806082 94806169 -155881685 + CT-rich Low_complexity Low_complexity 4 90 0 526 312 127 44 chr2 94806169 94806554 -155881300 - L1 LINE L1 -844 5302 4886 180 0 0 0 chr2 94806916 94806936 -155880918 + (CAGGC)n Simple_repeat Simple_repeat 1 20 0 774 178 20 14 chr2 94807349 94807495 -155880359 + MER45A DNA AcHobo 4 150 -28 335 184 64 92 chr2 94808765 94808874 -155878980 + MER103 DNA DNA 10 115 -51 417 95 0 0 chr2 94809272 94809335 -155878519 + (TG)n Simple_repeat Simple_repeat 1 63 0 1709 195 39 23 chr2 95011352 95011736 -155676118 + MLT1B LTR MaLR 1 390 0 247 122 0 0 chr2 95012054 95012095 -155675759 + Alu SINE Alu 253 293 -7 449 266 23 23 chr2 95012154 95012282 -155675572 + MER5B DNA MER1_type 50 177 -1 1259 241 85 3 chr2 95013104 95013423 -155674431 + MER2 DNA MER2_type 1 345 0 21 0 0 0 chr2 95013442 95013463 -155674391 + AT_rich Low_complexity Low_complexity 1 21 0 2073 121 0 0 chr2 95014124 95014429 -155673425 - AluSx SINE Alu 0 308 4 28 0 0 0 chr2 95014501 95014529 -155673325 + AT_rich Low_complexity Low_complexity 1 28 0 237 309 75 75 chr2 95014882 95015134 -155672720 - L2 LINE L2 -934 2380 2129 195 294 43 43 chr2 95015147 95015239 -155672615 + MIR SINE MIR 5 96 -166 23 0 0 0 chr2 95015349 95015372 -155672482 + AT_rich Low_complexity Low_complexity 1 23 0 249 244 37 12 chr2 95015713 95015795 -155672059 + CT-rich Low_complexity Low_complexity 1 84 0 22 35 0 0 chr2 95016824 95016853 -155671001 + AT_rich Low_complexity Low_complexity 1 29 0 558 108 0 0 chr2 95017638 95017721 -155670133 + (TA)n Simple_repeat Simple_repeat 2 84 0 183 368 0 0 chr2 95017733 95017790 -155670064 + L2 LINE L2 3245 3301 -12 2552 166 22 41 chr2 95018037 95018589 -155669265 + L1MC2 LINE L1 5647 6186 -158 1204 255 127 19 chr2 95019226 95019645 -155668209 + MLT1C LTR MaLR 4 467 0 220 354 68 12 chr2 95019682 95019843 -155668011 + L2 LINE L2 3104 3273 -40 390 378 28 0 chr2 95020285 95020465 -155667389 - LTR33 LTR ERVL -260 261 77 27 0 0 0 chr2 95020933 95020960 -155666894 + AT_rich Low_complexity Low_complexity 1 27 0 2405 209 44 9 chr2 95021026 95021553 -155666301 + Tigger3b DNA MER2_type 1 545 -686 476 134 10 0 chr2 95022116 95022213 -155665641 + (TG)n Simple_repeat Simple_repeat 2 99 0 451 283 101 0 chr2 95023271 95023430 -155664424 - MER67D LTR ERV1 -114 400 226 33 43 0 0 chr2 95023442 95023489 -155664365 + AT_rich Low_complexity Low_complexity 1 47 0 1981 121 7 3 chr2 95023704 95024009 -155663845 + AluSx SINE Alu 1 306 -6 22 0 0 0 chr2 95024272 95024294 -155663560 + AT_rich Low_complexity Low_complexity 1 22 0 2345 160 20 18 chr2 95024950 95025393 -155662461 - L1MA5 LINE L1 -235 6065 5622 216 109 0 146 chr2 95025794 95025849 -155662005 + L2 LINE L2 3267 3313 0 292 239 80 0 chr2 95026404 95026492 -155661362 + HsTC2 DNA Tc2 1802 1896 -2 23 0 0 0 chr2 95026745 95026768 -155661086 + AT_rich Low_complexity Low_complexity 1 23 0 383 308 54 38 chr2 95027769 95027954 -155659900 + MIR3 SINE MIR 5 192 -16 267 380 54 10 chr2 95029505 95029710 -155658144 - L3b LINE CR1 -124 1459 1246 2110 122 73 14 chr2 95030020 95030364 -155657490 - THE1B LTR MaLR 0 364 1 10613 119 11 15 chr2 95030369 95031540 -155656314 - THE1B-int LTR MaLR -6 1574 410 645 219 129 0 chr2 95031540 95031695 -155656159 - FAM SINE Alu 0 175 1 10613 119 11 15 chr2 95031695 95032104 -155655750 - THE1B-int LTR MaLR -1170 410 1 2041 126 89 15 chr2 95032104 95032430 -155655424 - THE1B LTR MaLR 0 364 15 254 336 29 39 chr2 95033281 95033385 -155654469 + MIR3 SINE MIR 67 169 -39 21 57 0 0 chr2 95035221 95035256 -155652598 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr2 95036587 95036630 -155651224 + AT_rich Low_complexity Low_complexity 1 43 0 257 356 26 9 chr2 95038119 95038234 -155649620 - L2 LINE L2 -936 2378 2262 684 243 28 23 chr2 95038361 95038538 -155649316 - MER5B DNA MER1_type 0 178 1 505 257 34 67 chr2 95038556 95038674 -155649180 + MER5B DNA MER1_type 3 115 -63 1985 132 0 22 chr2 95038674 95038993 -155648861 - AluSx SINE Alu 0 312 1 505 257 34 67 chr2 95038993 95039053 -155648801 + MER5B DNA MER1_type 115 175 -3 181 273 0 0 chr2 95039588 95039632 -155648222 + MER5B DNA MER1_type 1 44 -134 930 56 16 8 chr2 95039635 95039761 -155648093 + AluY SINE Alu 4 130 -181 245 399 50 9 chr2 95039871 95040089 -155647765 + L2 LINE L2 2619 2845 -469 1537 114 4 24 chr2 95040100 95040355 -155647499 - L1PA13 LINE L1 -1 6162 5913 343 150 0 75 chr2 95040862 95040942 -155646912 - MER3 DNA MER1_type -1 208 135 2267 78 7 16 chr2 95041187 95041496 -155646358 - AluSc SINE Alu -3 306 1 23 0 0 0 chr2 95044205 95044228 -155643626 + AT_rich Low_complexity Low_complexity 1 23 0 236 298 12 48 chr2 95044862 95044946 -155642908 - L3 LINE CR1 -254 1323 1243 477 260 0 0 chr2 95045060 95045160 -155642694 - MER20 DNA MER1_type -1 218 119 247 374 0 9 chr2 95045190 95045305 -155642549 + MLT1J LTR MaLR 101 214 -297 22 0 0 0 chr2 95047677 95047699 -155640155 + AT_rich Low_complexity Low_complexity 1 22 0 1419 147 4 17 chr2 95047954 95048186 -155639668 - MER30 DNA MER1_type -1 229 1 518 235 103 7 chr2 95048390 95048526 -155639328 - MER45C DNA AcHobo -94 859 711 991 254 70 0 chr2 95048594 95048807 -155639047 - MER45C DNA AcHobo -721 232 5 881 341 11 3 chr2 95049166 95049450 -155638404 + MLT2E LTR ERVL 93 378 -250 494 261 12 19 chr2 95049481 95049642 -155638212 + MLT2E LTR ERVL 469 628 0 1306 258 15 19 chr2 95050532 95051001 -155636853 - L1M4 LINE L1 -2536 3610 3144 32 0 0 0 chr2 95051075 95051107 -155636747 + AT_rich Low_complexity Low_complexity 1 32 0 2512 260 68 89 chr2 95051553 95052843 -155635011 + L1MCc LINE L1 11 1273 -5150 26 30 0 0 chr2 95053376 95053409 -155634445 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr2 95053584 95053608 -155634246 + AT_rich Low_complexity Low_complexity 1 24 0 302 307 96 32 chr2 95054574 95054593 -155633261 + L1MCc LINE L1 2040 2056 -5066 2159 92 10 14 chr2 95054593 95054907 -155632947 + AluSq SINE Alu 1 313 0 302 307 96 32 chr2 95054907 95055314 -155632540 + L1MCc LINE L1 2056 2543 -4579 22 0 0 0 chr2 95055344 95055366 -155632488 + AT_rich Low_complexity Low_complexity 1 22 0 1008 308 109 47 chr2 95055543 95056364 -155631490 + L1MCc LINE L1 2859 3627 -3314 2565 39 3 3 chr2 95056364 95056673 -155631181 + AluY SINE Alu 1 309 -2 1008 308 109 47 chr2 95056673 95056725 -155631129 + L1MCc LINE L1 3627 3674 -3267 1155 145 15 0 chr2 95056725 95056925 -155630929 + L1PB3 LINE L1 5942 6144 -10 1008 308 109 47 chr2 95056925 95057230 -155630624 + L1MCc LINE L1 3674 3959 -2982 186 43 0 0 chr2 95057230 95057253 -155630601 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 1008 308 109 47 chr2 95057253 95058118 -155629736 + L1MCc LINE L1 3959 4994 -1947 5907 152 7 5 chr2 95058896 95059260 -155628594 - L1PB1 LINE L1 -6 6145 5783 306 0 0 0 chr2 95059260 95059294 -155628560 + (CA)n Simple_repeat Simple_repeat 2 35 0 5907 152 7 5 chr2 95059294 95060056 -155627798 - L1PB1 LINE L1 -368 5783 5014 1824 142 14 7 chr2 95060056 95060370 -155627484 - AluSx SINE Alu 0 316 1 5907 152 7 5 chr2 95060370 95060571 -155627283 - L1PB1 LINE L1 -1137 5014 4815 436 273 8 30 chr2 95060714 95060846 -155627008 + L1M4 LINE L1 2673 2801 -3345 1733 31 0 0 chr2 95061295 95061489 -155626365 - AluY SINE Alu -116 195 2 696 74 0 0 chr2 95061490 95061585 -155626269 + AluY SINE Alu 215 309 -2 270 185 0 0 chr2 95062120 95062201 -155625653 + C-rich Low_complexity Low_complexity 1 81 0 2107 111 3 17 chr2 95063026 95063323 -155624531 + AluSg SINE Alu 1 293 -17 21 36 0 0 chr2 95064046 95064074 -155623780 + AT_rich Low_complexity Low_complexity 1 28 0 1045 295 20 9 chr2 95064196 95064545 -155623309 - MLT1E2 LTR MaLR -49 577 225 5407 126 1 15 chr2 95064571 95066184 -155621670 - L1PA15 LINE L1 0 6165 4550 8613 220 16 32 chr2 95066185 95067390 -155620464 - L1PA15 LINE L1 -2171 3975 2828 3193 37 3 0 chr2 95067390 95067772 -155620082 - L1PA3 LINE L1 -2 6153 5771 8613 220 16 32 chr2 95067772 95069049 -155618805 - L1PA15 LINE L1 -3318 2828 1532 5325 216 23 30 chr2 95069057 95070179 -155617675 + L1PA12 LINE L1 1543 2656 -4925 1847 156 56 14 chr2 95070179 95070539 -155617315 - THE1C LTR MaLR 0 375 1 5325 216 23 30 chr2 95070539 95070756 -155617098 + L1PA12 LINE L1 2656 2873 -4708 360 221 102 90 chr2 95070756 95070934 -155616920 - MLT1E2 LTR MaLR -397 257 1 5867 167 59 3 chr2 95072110 95073275 -155614579 - Tigger3b DNA MER2_type -1 1230 1 950 180 72 19 chr2 95074342 95074668 -155613186 + MSTD LTR MaLR 5 396 0 25 51 0 0 chr2 95074919 95074958 -155612896 + AT_rich Low_complexity Low_complexity 1 39 0 1621 164 46 48 chr2 95075094 95075466 -155612388 + THE1C LTR MaLR 4 374 -1 217 208 52 0 chr2 95075644 95075721 -155612133 + (TATATG)n Simple_repeat Simple_repeat 4 84 0 21 0 0 0 chr2 95076414 95076435 -155611419 + AT_rich Low_complexity Low_complexity 1 21 0 2286 37 0 7 chr2 95077549 95077821 -155610033 - AluY SINE Alu -16 295 26 709 239 65 33 chr2 95077900 95078206 -155609648 - L1MCa LINE L1 -3950 2476 2161 1397 223 42 3 chr2 95078269 95078601 -155609253 + MLT1A1 LTR MaLR 21 365 0 1297 196 34 57 chr2 95078673 95078970 -155608884 - L1MCa LINE L1 -4421 2005 1703 1766 128 8 16 chr2 95078970 95079227 -155608627 + AluSc SINE Alu 1 255 -54 1297 196 34 57 chr2 95079227 95079604 -155608250 - L1MCa LINE L1 -4723 1703 1259 233 104 62 0 chr2 95079630 95079678 -155608176 + A-rich Low_complexity Low_complexity 3 53 0 216 200 0 0 chr2 95079921 95079966 -155607888 + (TA)n Simple_repeat Simple_repeat 1 45 0 207 0 0 0 chr2 95079966 95079989 -155607865 + (CA)n Simple_repeat Simple_repeat 2 24 0 632 250 14 0 chr2 95082345 95082493 -155605361 + MIR SINE MIR 113 262 0 576 298 138 9 chr2 95082596 95082821 -155605033 + MIR SINE MIR 1 254 -8 30 59 0 0 chr2 95084754 95084805 -155603049 + AT_rich Low_complexity Low_complexity 1 51 0 2028 109 7 0 chr2 95086934 95087208 -155600646 - AluSx SINE Alu -20 292 17 2379 76 0 22 chr2 95087342 95087657 -155600197 - AluSg1 SINE Alu -1 308 1 201 154 0 0 chr2 95087778 95087817 -155600037 + (TG)n Simple_repeat Simple_repeat 1 39 0 1971 125 6 6 chr2 95089633 95089945 -155597909 - AluSx SINE Alu 0 312 1 37 0 0 0 chr2 95090171 95090208 -155597646 + AT_rich Low_complexity Low_complexity 1 37 0 392 269 106 6 chr2 95090219 95090379 -155597475 + MER67D LTR ERV1 225 400 -114 389 141 12 0 chr2 95091440 95091525 -155596329 + (CA)n Simple_repeat Simple_repeat 2 87 0 359 339 74 44 chr2 95093131 95093497 -155594357 + L2 LINE L2 2464 2840 -474 2285 103 0 29 chr2 95093624 95093936 -155593918 - AluY SINE Alu -8 303 1 24 77 0 0 chr2 95094044 95094096 -155593758 + AT_rich Low_complexity Low_complexity 1 52 0 23 0 0 0 chr2 95094660 95094683 -155593171 + AT_rich Low_complexity Low_complexity 1 23 0 201 244 0 0 chr2 95094710 95094751 -155593103 + (CA)n Simple_repeat Simple_repeat 2 42 0 6159 128 21 20 chr2 95095340 95096308 -155591546 - LTR5 LTR ERVK 0 969 1 231 301 48 41 chr2 95096918 95097064 -155590790 + L1MCc LINE L1 42 188 -6235 1344 204 7 48 chr2 95097268 95097562 -155590292 - AluJo SINE Alu -30 282 1 1174 181 69 43 chr2 95098301 95098603 -155589251 - MSTB LTR MaLR 0 426 117 936 127 217 0 chr2 95098603 95098695 -155589159 - MER30 DNA MER1_type 0 230 159 234 0 0 0 chr2 95098695 95098721 -155589133 + (TG)n Simple_repeat Simple_repeat 2 27 0 936 127 217 0 chr2 95098721 95098817 -155589037 - MER30 DNA MER1_type -71 159 1 792 122 16 0 chr2 95098817 95098939 -155588915 - MSTB LTR MaLR -302 124 1 408 293 75 53 chr2 95098964 95099230 -155588624 - L1ME LINE L1 -547 5623 5352 1224 293 37 5 chr2 95099595 95099974 -155587880 + MER70A LTR ERVL 15 405 -67 3243 123 22 0 chr2 95100740 95101246 -155586608 + L1PB2 LINE L1 5631 6147 -4 21 0 0 0 chr2 95103034 95103055 -155584799 + AT_rich Low_complexity Low_complexity 1 21 0 1532 164 24 41 chr2 95103055 95103348 -155584506 - AluJo SINE Alu -24 288 1 276 130 0 0 chr2 95103982 95104028 -155583826 + (TG)n Simple_repeat Simple_repeat 1 46 0 244 309 0 24 chr2 95104191 95104275 -155583579 - MIR SINE MIR -20 242 161 236 209 30 0 chr2 95104285 95104352 -155583502 + (CA)n Simple_repeat Simple_repeat 2 70 0 606 162 0 0 chr2 95104878 95105014 -155582840 + (CA)n Simple_repeat Simple_repeat 1 136 0 861 144 0 0 chr2 95105035 95105209 -155582645 + (CA)n Simple_repeat Simple_repeat 2 175 0 448 167 281 0 chr2 95105259 95105355 -155582499 + FLAM_C SINE Alu 1 123 -20 713 268 87 38 chr2 95105601 95105970 -155581884 - MLT1K LTR MaLR -2 586 200 180 0 0 0 chr2 95106045 95106065 -155581789 + (A)n Simple_repeat Simple_repeat 1 20 0 396 307 23 8 chr2 95106434 95106573 -155581281 + MIR SINE MIR 18 157 -51 888 215 79 2 chr2 95106574 95106965 -155580889 - LTR46 LTR ERV1 0 460 1 408 319 150 15 chr2 95107007 95107333 -155580521 - L2 LINE L2 -24 3289 2920 444 266 46 6 chr2 95108158 95108331 -155579523 + LTR33 LTR ERVL 279 458 -63 2285 90 0 0 chr2 95108589 95108878 -155578976 - AluY SINE Alu -22 289 1 496 320 131 14 chr2 95108968 95109190 -155578664 + MIR SINE MIR 15 262 0 364 324 0 0 chr2 95109341 95109452 -155578402 + MIR SINE MIR 30 140 -122 317 272 25 0 chr2 95109503 95109584 -155578270 - LTR16C LTR ERVL 0 491 409 * 973 282 21 0 chr2 95109575 95109901 -155577953 - LTR16C LTR ERVL -29 462 130 281 258 82 10 chr2 95110297 95110394 -155577460 - MIR SINE MIR -60 148 45 624 120 2 36 chr2 95114604 95114992 -155572862 + HSAT5 Satellite Satellite 1 374 -9 384 207 0 18 chr2 95115218 95115320 -155572534 + HSAT5 Satellite Satellite 1 100 -1 313 185 18 31 chr2 95115552 95115644 -155572210 + HSAT5 Satellite Satellite 1 90 -8 * 569 237 131 66 chr2 95115629 95115827 -155572027 - MSTA LTR MaLR -141 285 75 851 206 170 43 chr2 95115831 95116108 -155571746 + THE1-int LTR MaLR 907 1218 -362 439 194 19 37 chr2 95116199 95116307 -155571547 - MSTA LTR MaLR -322 106 1 1133 207 92 20 chr2 95116307 95116612 -155571242 - MSTA-int LTR MaLR 0 1651 1325 317 225 112 22 chr2 95116618 95116707 -155571147 - MSTA LTR MaLR -257 171 75 425 224 20 10 chr2 95116758 95116856 -155570998 - MSTA LTR MaLR -329 99 1 5901 215 60 52 chr2 95116856 95118467 -155569387 - MSTA-int LTR MaLR 0 1651 28 438 188 181 8 chr2 95118464 95118597 -155569257 + MST-int LTR MaLR 506 661 -990 * 913 230 78 12 chr2 95118639 95118896 -155568958 - MSTA LTR MaLR -60 368 95 844 209 189 20 chr2 95118910 95119154 -155568700 + THE1-int LTR MaLR 907 1191 -389 267 183 17 50 chr2 95119142 95119202 -155568652 - THE1-int LTR MaLR -613 967 910 * 468 200 21 0 chr2 95119292 95119387 -155568467 - MSTA LTR MaLR -331 97 1 1442 216 0 40 chr2 95119387 95119735 -155568119 - MSTA-int LTR MaLR 0 1651 1318 230 286 132 0 chr2 95119738 95119829 -155568025 - MSTA LTR MaLR -261 167 65 458 214 20 0 chr2 95119876 95119974 -155567880 - MSTA LTR MaLR -328 100 1 5872 231 43 43 chr2 95119974 95121592 -155566262 - MSTA-int LTR MaLR 0 1651 34 503 218 165 8 chr2 95121595 95121728 -155566126 + MST-int LTR MaLR 506 659 -992 940 239 81 25 chr2 95121764 95122049 -155565805 - MSTA LTR MaLR -52 376 76 903 201 189 20 chr2 95122053 95122297 -155565557 + THE1-int LTR MaLR 907 1191 -389 278 232 18 0 chr2 95122285 95122341 -155565513 - THE1-int LTR MaLR -613 967 911 * 212 277 24 12 chr2 95122352 95122435 -155565419 + (CACCC)n Simple_repeat Simple_repeat 4 87 0 486 179 21 0 chr2 95122437 95122532 -155565322 - MSTA LTR MaLR -331 97 1 365 206 0 0 chr2 95122532 95122605 -155565249 - MSTA-int LTR MaLR 0 1651 1579 877 244 78 14 chr2 95122641 95122924 -155564930 - MSTA LTR MaLR -52 376 76 602 261 183 17 chr2 95122929 95123170 -155564684 + MST-int LTR MaLR 976 1256 -395 249 179 36 18 chr2 95123158 95123214 -155564640 - MSTA-int LTR MaLR -613 967 911 * 340 189 29 2 chr2 95123317 95123393 -155564461 - MSTA LTR MaLR -356 76 1 1303 219 33 42 chr2 95123393 95123726 -155564128 - MSTA-int LTR MaLR 0 1651 1322 267 277 109 0 chr2 95123730 95123831 -155564023 - MSTA LTR MaLR -257 171 60 435 237 21 0 chr2 95123880 95123977 -155563877 - MSTA LTR MaLR -329 99 1 6349 238 45 20 chr2 95123977 95125560 -155562294 - MSTA-int LTR MaLR 0 1651 28 573 193 161 10 chr2 95125555 95125708 -155562146 + MST-int LTR MaLR 463 661 -963 * 918 243 68 20 chr2 95125716 95126012 -155561842 - MSTA LTR MaLR -43 385 76 654 287 94 19 chr2 95126016 95126281 -155561573 + THE1-int LTR MaLR 907 1191 -389 292 196 18 0 chr2 95126269 95126325 -155561529 - THE1-int LTR MaLR -613 967 911 * 441 176 19 46 chr2 95126410 95126518 -155561336 - MSTA LTR MaLR -323 105 1 1209 217 16 38 chr2 95126518 95126836 -155561018 - MSTA-int LTR MaLR 0 1651 1341 667 218 28 73 chr2 95126842 95127021 -155560833 - MSTA LTR MaLR -257 171 1 6370 215 66 22 chr2 95127021 95128577 -155559277 - MSTA-int LTR MaLR 0 1651 28 413 212 154 10 chr2 95128572 95128726 -155559128 + MST-int LTR MaLR 463 661 -963 * 1160 228 48 8 chr2 95128744 95129012 -155558842 - MSTA LTR MaLR -54 374 96 833 206 174 43 chr2 95129037 95129313 -155558541 + THE1-int LTR MaLR 907 1218 -362 225 204 56 0 chr2 95129268 95129322 -155558532 - THE1-int LTR MaLR -613 967 911 * 568 156 10 0 chr2 95129407 95129503 -155558351 - MSTA LTR MaLR -331 97 1 1084 227 33 52 chr2 95129503 95129833 -155558021 - MSTA-int LTR MaLR 0 1651 1328 378 209 109 9 chr2 95129833 95129943 -155557911 - MSTA LTR MaLR -250 178 58 434 196 20 10 chr2 95129984 95130086 -155557768 - MSTA LTR MaLR -325 103 1 341 167 13 13 chr2 95130086 95130164 -155557690 - MSTA-int LTR MaLR 0 1651 1574 383 167 0 0 chr2 95130166 95130226 -155557628 + MSTA LTR MaLR 317 376 -52 241 154 0 0 chr2 95130260 95130299 -155557555 - MSTA-int LTR MaLR -990 661 623 6494 216 50 25 chr2 95130299 95131829 -155556025 - MSTA-int LTR MaLR -68 1583 15 431 182 36 13 chr2 95131902 95132015 -155555839 + MST-int LTR MaLR 506 661 -963 1013 214 64 19 chr2 95132033 95132299 -155555555 - MSTA LTR MaLR -54 374 97 710 244 184 21 chr2 95132325 95132559 -155555295 + THE1-int LTR MaLR 907 1178 -402 461 202 32 0 chr2 95132709 95132803 -155555051 - MSTA LTR MaLR -331 97 1 1479 204 12 47 chr2 95132805 95133149 -155554705 - MSTA-int LTR MaLR -2 1649 1318 387 214 107 0 chr2 95133152 95133236 -155554618 - MSTA LTR MaLR -261 167 75 465 187 9 37 chr2 95133321 95133428 -155554426 - MSTA LTR MaLR -324 104 1 5978 238 55 20 chr2 95133429 95134998 -155552856 - MSTA-int LTR MaLR -1 1650 27 387 233 156 10 chr2 95134995 95135146 -155552708 + MST-int LTR MaLR 466 661 -963 * 1233 220 59 7 chr2 95135162 95135448 -155552406 - MSTA LTR MaLR -52 376 76 807 218 193 21 chr2 95135452 95135695 -155552159 + THE1-int LTR MaLR 907 1191 -389 294 165 94 82 chr2 95135654 95135739 -155552115 - MST-int LTR MaLR -587 1064 979 * 446 233 0 0 chr2 95135861 95135964 -155551890 - MST-int LTR MaLR -1521 130 28 * 470 225 149 1 chr2 95135961 95136113 -155551741 + MST-int LTR MaLR 465 661 -959 1539 222 32 27 chr2 95136128 95136502 -155551352 - MSTA LTR MaLR -52 376 1 1143 176 45 20 chr2 95136502 95136747 -155551107 - MSTA-int LTR MaLR 0 1651 1401 * 1332 175 16 0 chr2 95136744 95136990 -155550864 - MSTA-int LTR MaLR -1401 250 1 1407 254 51 3 chr2 95137007 95137358 -155550496 - MSTA LTR MaLR -60 368 1 486 179 21 0 chr2 95138753 95138848 -155549006 - MSTA LTR MaLR -331 97 1 365 206 0 0 chr2 95138848 95138921 -155548933 - MSTA-int LTR MaLR 0 1651 1579 877 244 78 14 chr2 95138957 95139240 -155548614 - MSTA LTR MaLR -52 376 76 746 232 195 17 chr2 95139245 95139486 -155548368 + THE1-int LTR MaLR 908 1191 -389 240 179 36 18 chr2 95139474 95139530 -155548324 - MSTA-int LTR MaLR -613 967 911 * 400 176 13 2 chr2 95139632 95139709 -155548145 - MSTA LTR MaLR -356 76 1 6058 222 68 22 chr2 95139709 95141264 -155546590 - MSTA-int LTR MaLR 0 1651 27 387 233 156 10 chr2 95141261 95141412 -155546442 + MST-int LTR MaLR 466 661 -963 * 1233 220 59 7 chr2 95141428 95141714 -155546140 - MSTA LTR MaLR -52 376 76 807 218 193 21 chr2 95141718 95141961 -155545893 + THE1-int LTR MaLR 907 1191 -389 294 165 94 82 chr2 95141920 95142005 -155545849 - MST-int LTR MaLR -587 1064 979 * 446 233 0 0 chr2 95142127 95142230 -155545624 - MST-int LTR MaLR -1521 130 28 * 470 225 149 1 chr2 95142227 95142379 -155545475 + MST-int LTR MaLR 465 661 -959 1539 222 32 27 chr2 95142394 95142768 -155545086 - MSTA LTR MaLR -52 376 1 1143 176 45 20 chr2 95142768 95143013 -155544841 - MSTA-int LTR MaLR 0 1651 1401 * 1332 175 16 0 chr2 95143010 95143256 -155544598 - MSTA-int LTR MaLR -1401 250 1 1407 254 51 3 chr2 95143273 95143624 -155544230 - MSTA LTR MaLR -60 368 1 1888 122 92 48 chr2 95145570 95146006 -155541848 + SN5 Other centromeric 1 455 0 180 231 0 0 chr2 95146250 95146302 -155541552 + (TG)n Simple_repeat Simple_repeat 2 53 0 259 213 18 35 chr2 95146701 95146797 -155541057 + HSAT5 Satellite Satellite 1 94 -2 286 218 13 26 chr2 95146808 95146886 -155540968 + HSAT5 Satellite Satellite 9 85 -1 330 201 37 24 chr2 95147088 95147255 -155540599 + HSAT5 Satellite Satellite 1 169 -1 810 232 22 0 chr2 95147812 95147993 -155539861 + L1MC4 LINE L1 6819 7003 -1039 876 199 42 7 chr2 95148036 95148251 -155539603 + L1MC4 LINE L1 7112 7362 -680 24 53 0 0 chr2 95148556 95148594 -155539260 + AT_rich Low_complexity Low_complexity 1 38 0 231 295 143 37 chr2 95149126 95149398 -155538456 - L2 LINE L2 -227 3045 2745 2187 118 0 0 chr2 95150214 95150518 -155537336 + AluSc SINE Alu 1 304 -5 4548 181 26 20 chr2 95150703 95151838 -155536016 - L1PA16 LINE L1 0 6166 5026 1849 150 17 0 chr2 95151874 95152168 -155535686 - AluSx SINE Alu -13 299 1 1782 133 36 0 chr2 95152359 95152638 -155535216 - AluSg1 SINE Alu -20 289 1 1956 146 0 0 chr2 95152666 95152960 -155534894 + AluSg SINE Alu 1 294 -16 409 230 10 0 chr2 95153919 95154019 -155533835 + L1MA9 LINE L1 6163 6263 -49 4583 37 7 0 chr2 95154324 95154871 -155532983 - L1PA4 LINE L1 -2 6153 5603 226 233 0 0 chr2 95155246 95155289 -155532565 + GA-rich Low_complexity Low_complexity 2 44 0 1210 219 14 17 chr2 95157019 95157311 -155530543 + AluJo SINE Alu 6 296 -16 3109 203 35 14 chr2 95157424 95158535 -155529319 + L1MA5 LINE L1 4808 5941 -359 1045 229 31 8 chr2 95158543 95158801 -155529053 + AluJo SINE Alu 1 264 -48 1248 175 88 0 chr2 95158868 95159142 -155528712 + L1MA5 LINE L1 5997 6294 -6 800 301 83 20 chr2 95159178 95159557 -155528297 + MLT1G1 LTR MaLR 79 560 -35 2405 198 40 42 chr2 95160881 95161949 -155525905 + L1MB8 LINE L1 4766 5836 -342 2134 153 75 7 chr2 95161958 95162370 -155525484 + MER61C LTR ERV1 11 434 0 1215 198 84 28 chr2 95162370 95162693 -155525161 + L1MB8 LINE L1 5833 6173 -5 1246 214 96 30 chr2 95162924 95163288 -155524566 + MER4E LTR ERV1 1 388 -391 3232 126 22 0 chr2 95163383 95163875 -155523979 + L1PA10 LINE L1 5655 6157 -11 1959 155 20 0 chr2 95164251 95164555 -155523299 - AluSq SINE Alu -3 310 1 24 32 0 0 chr2 95165131 95165162 -155522692 + AT_rich Low_complexity Low_complexity 1 31 0 294 188 0 16 chr2 95165169 95165233 -155522621 - MER34C LTR ERV1 -100 485 423 1987 118 66 0 chr2 95165498 95165787 -155522067 + AluSg SINE Alu 1 308 -2 2171 123 3 3 chr2 95167042 95167350 -155520504 - AluSg SINE Alu -1 309 2 2034 151 0 0 chr2 95167701 95167999 -155519855 - AluSx SINE Alu -14 298 1 1407 156 0 76 chr2 95168417 95168693 -155519161 - AluJb SINE Alu -20 292 38 203 233 50 0 chr2 95168716 95168776 -155519078 + MIR SINE MIR 198 260 -2 1724 202 75 67 chr2 95169787 95170307 -155517547 + L1MB8 LINE L1 5653 6176 -2 410 302 54 13 chr2 95171373 95171522 -155516332 + L2 LINE L2 2722 2876 -438 1125 232 36 13 chr2 95172242 95172552 -155515302 - L1MB7 LINE L1 0 6184 5871 23 0 0 0 chr2 95174551 95174574 -155513280 + AT_rich Low_complexity Low_complexity 1 23 0 558 293 73 4 chr2 95175615 95175847 -155512007 - L1MB7 LINE L1 -478 5643 5396 2148 120 3 3 chr2 95175961 95176269 -155511585 + AluSq SINE Alu 1 308 -5 24 53 0 0 chr2 95176600 95176638 -155511216 + AT_rich Low_complexity Low_complexity 1 38 0 580 69 23 0 chr2 95178316 95178403 -155509451 - L1PA5 LINE L1 0 6154 6066 26 30 0 0 chr2 95180405 95180438 -155507416 + AT_rich Low_complexity Low_complexity 1 33 0 1463 231 30 0 chr2 95181144 95181442 -155506412 + AluJo SINE Alu 1 307 -5 206 225 0 0 chr2 95181663 95181703 -155506151 - L2 LINE L2 -12 3301 3262 1908 166 7 0 chr2 95182003 95182305 -155505549 - AluSx SINE Alu -8 304 1 2087 116 7 0 chr2 95182737 95183096 -155504758 - AluSp SINE Alu 0 361 1 21 0 0 0 chr2 95184575 95184596 -155503258 + AT_rich Low_complexity Low_complexity 1 21 0 1820 176 0 0 chr2 95184849 95185155 -155502699 + AluSx SINE Alu 3 308 -4 281 171 195 12 chr2 95188277 95188359 -155499495 + MER5A DNA MER1_type 10 106 -83 2328 89 0 0 chr2 95189215 95189519 -155498335 - AluY SINE Alu -7 304 1 1395 226 0 24 chr2 95189715 95190011 -155497843 - AluJo SINE Alu -23 289 1 1586 199 0 7 chr2 95190045 95190327 -155497527 + AluJb SINE Alu 3 282 -30 6184 58 1 0 chr2 95190712 95191486 -155496368 + L1PA5 LINE L1 5376 6150 -4 22 35 0 0 chr2 95191734 95191763 -155496091 + AT_rich Low_complexity Low_complexity 1 29 0 1142 213 35 57 chr2 95191855 95192137 -155495717 + AluJb SINE Alu 13 288 -24 1695 122 12 103 chr2 95192323 95192492 -155495362 - AluSx SINE Alu -19 293 165 216 0 0 0 chr2 95192492 95192516 -155495338 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1695 122 12 103 chr2 95192516 95192666 -155495188 - AluSx SINE Alu -147 165 3 612 194 0 0 chr2 95192923 95193021 -155494833 - FLAM_A SINE Alu -43 99 2 214 307 134 24 chr2 95195355 95195482 -155492372 + MIR SINE MIR 19 159 -49 221 350 80 31 chr2 95196082 95196308 -155491546 + MIR SINE MIR 20 256 -6 635 219 0 24 chr2 95196464 95196587 -155491267 + FLAM_A SINE Alu 6 125 -17 696 167 39 26 chr2 95197028 95197184 -155490670 - MER21A LTR ERV1 -29 902 745 829 142 45 0 chr2 95197188 95197322 -155490532 + Tigger7 DNA MER2_type 2348 2487 0 2389 164 0 39 chr2 95198341 95198799 -155489055 + L1MC1 LINE L1 5894 6333 0 2052 138 0 3 chr2 95198807 95199103 -155488751 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr2 95199143 95199164 -155488690 + AT_rich Low_complexity Low_complexity 1 21 0 2103 136 7 3 chr2 95199164 95199474 -155488380 + AluSq SINE Alu 1 311 -2 33 0 0 0 chr2 95199593 95199626 -155488228 + AT_rich Low_complexity Low_complexity 1 33 0 21 57 0 0 chr2 95199965 95200000 -155487854 + AT_rich Low_complexity Low_complexity 1 35 0 2508 189 48 16 chr2 95200033 95200578 -155487276 + MER68 LTR ERV1 1 562 0 1473 214 13 16 chr2 95200944 95201063 -155486791 + AluJb SINE Alu 1 119 -193 219 36 0 0 chr2 95201063 95201091 -155486763 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1473 214 13 16 chr2 95201091 95201275 -155486579 + AluJb SINE Alu 119 303 -9 874 170 0 0 chr2 95201310 95201445 -155486409 + FAM SINE Alu 22 156 -29 237 291 0 0 chr2 95201751 95201806 -155486048 + (TG)n Simple_repeat Simple_repeat 2 56 0 2020 182 35 12 chr2 95202059 95202483 -155485371 + Tigger2a DNA MER2_type 1 434 0 25 51 0 0 chr2 95202486 95202525 -155485329 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 95202753 95202775 -155485079 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 95203633 95203659 -155484195 + AT_rich Low_complexity Low_complexity 1 26 0 540 226 0 0 chr2 95204084 95204190 -155483664 - U6 snRNA snRNA -1 106 1 21 0 0 0 chr2 95204306 95204327 -155483527 + AT_rich Low_complexity Low_complexity 1 21 0 643 177 0 0 chr2 95205148 95205261 -155482593 + FLAM_C SINE Alu 31 143 0 183 156 0 0 chr2 95206096 95206128 -155481726 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2295 103 0 0 chr2 95206178 95206470 -155481384 + AluSc SINE Alu 2 293 -16 22 56 0 0 chr2 95207914 95207950 -155479904 + AT_rich Low_complexity Low_complexity 1 36 0 1961 116 0 35 chr2 95208705 95209015 -155478839 - AluSx SINE Alu -13 299 1 1674 188 72 36 chr2 95209346 95209492 -155478362 - MER6A DNA MER2_type -491 374 235 252 0 0 0 chr2 95209492 95209520 -155478334 + (CA)n Simple_repeat Simple_repeat 2 29 0 1674 188 72 36 chr2 95209520 95209734 -155478120 - MER6A DNA MER2_type -630 235 1 1231 253 20 10 chr2 95210603 95210904 -155476950 - LTR42 LTR ERVL -3 492 189 576 111 12 0 chr2 95210905 95210986 -155476868 - AluSg/x SINE Alu -20 292 211 503 232 22 7 chr2 95211047 95211185 -155476669 - MLT1D LTR MaLR 0 505 366 1248 129 0 6 chr2 95211292 95211470 -155476384 - AluSx SINE Alu -135 177 1 995 143 129 19 chr2 95211470 95211680 -155476174 + MER6A DNA MER2_type 373 605 0 180 0 0 0 chr2 95211981 95212001 -155475853 + (T)n Simple_repeat Simple_repeat 1 20 0 1809 168 10 0 chr2 95212752 95213044 -155474810 + AluSx SINE Alu 1 295 -17 29 59 0 15 chr2 95213298 95213338 -155474516 + AT_rich Low_complexity Low_complexity 1 41 -26 503 165 10 10 chr2 95213338 95213435 -155474419 + L1PB1 LINE L1 6053 6149 -2 29 59 0 15 chr2 95213435 95213462 -155474392 + AT_rich Low_complexity Low_complexity 41 67 0 210 250 0 0 chr2 95213583 95213643 -155474211 + A-rich Low_complexity Low_complexity 1 60 0 1627 204 3 7 chr2 95213711 95214005 -155473849 + AluJb SINE Alu 1 293 -19 1960 215 37 105 chr2 95214005 95214099 -155473755 + L1MB8 LINE L1 5498 5597 -581 621 211 0 47 chr2 95214099 95214227 -155473627 - FLAM_A SINE Alu -11 122 1 1960 215 37 105 chr2 95214227 95214793 -155473061 + L1MB8 LINE L1 5597 6107 -71 1522 216 3 0 chr2 95214793 95215089 -155472765 - AluJb SINE Alu -15 297 1 1960 215 37 105 chr2 95215089 95215152 -155472702 + L1MB8 LINE L1 6107 6173 -5 2035 148 0 7 chr2 95215162 95215466 -155472388 + AluSx SINE Alu 1 302 -10 1485 197 3 30 chr2 95215481 95215781 -155472073 + AluJo SINE Alu 11 302 -10 2113 134 3 0 chr2 95216087 95216385 -155471469 + AluSg SINE Alu 1 299 -11 243 196 10 98 chr2 95216582 95216684 -155471170 - LTR37A LTR ERV1 -93 333 241 1033 228 35 8 chr2 95216828 95217082 -155470772 - AluJo SINE Alu -6 306 46 727 208 0 0 chr2 95217143 95217273 -155470581 - FLAM_C SINE Alu -3 130 1 339 115 0 172 chr2 95218371 95218458 -155469396 - FLAM SINE Alu -6 127 63 243 287 87 52 chr2 95218511 95218626 -155469228 + MER5A DNA MER1_type 71 189 0 537 264 148 46 chr2 95220282 95220506 -155467348 + MIR SINE MIR 4 247 -15 1623 173 42 7 chr2 95220514 95220798 -155467056 - AluJo SINE Alu -18 294 1 473 265 0 26 chr2 95220896 95221047 -155466807 + MER104 DNA Tc2 34 180 0 24 67 0 0 chr2 95221632 95221677 -155466177 + AT_rich Low_complexity Low_complexity 1 45 0 339 252 68 54 chr2 95222263 95222410 -155465444 - L1ME LINE L1 -445 5676 5528 303 246 22 80 chr2 95222557 95222695 -155465159 + L1MC4 LINE L1 6574 6703 -1339 1916 126 40 0 chr2 95222708 95222986 -155464868 + AluSx SINE Alu 1 289 -23 28 29 0 0 chr2 95223038 95223073 -155464781 + AT_rich Low_complexity Low_complexity 1 35 0 1085 272 70 16 chr2 95225491 95226038 -155461816 - L1ME2 LINE L1 -134 6030 5455 2227 89 3 51 chr2 95226355 95226668 -155461186 + AluSp SINE Alu 1 298 -15 1811 112 12 0 chr2 95226724 95226973 -155460881 - AluSx SINE Alu -16 296 45 369 0 0 0 chr2 95227102 95227143 -155460711 + (CA)n Simple_repeat Simple_repeat 1 41 0 2124 83 7 30 chr2 95229291 95229591 -155458263 - AluY SINE Alu -18 293 1 4373 118 54 6 chr2 95229898 95230615 -155457239 + L1MA1 LINE L1 5546 6297 -5 844 224 63 0 chr2 95232746 95232969 -155454885 + L1MCa LINE L1 1333 1569 -4857 523 224 77 28 chr2 95233096 95233290 -155454564 + MLT1B LTR MaLR 1 191 -183 184 56 0 56 chr2 95233290 95233326 -155454528 + (TCTCCC)n Simple_repeat Simple_repeat 1 34 0 2320 114 0 9 chr2 95233456 95233772 -155454082 + AluSq SINE Alu 1 313 0 882 207 41 16 chr2 95235290 95235536 -155452318 + L1MC2 LINE L1 5352 5603 -639 205 244 0 0 chr2 95236749 95236794 -155451060 + G-rich Low_complexity Low_complexity 3 47 0 265 299 144 0 chr2 95245592 95245689 -155442165 - MIR SINE MIR -35 227 117 181 212 0 0 chr2 95247538 95247571 -155440283 - MIR SINE MIR -118 144 112 561 149 215 0 chr2 95247805 95247926 -155439928 + MLT1D LTR MaLR 313 459 -46 889 199 6 6 chr2 95248001 95248167 -155439687 - AluJb SINE Alu -23 289 124 414 57 0 0 chr2 95249238 95249291 -155438563 + (CA)n Simple_repeat Simple_repeat 2 54 0 343 134 0 30 chr2 95249427 95249494 -155438360 - FRAM/FAM SINE Alu -81 85 21 4804 42 5 2 chr2 95249631 95250207 -155437647 + L1PA5 LINE L1 5576 6153 -1 3595 203 29 54 chr2 95250249 95251234 -155436620 - L1ME2 LINE L1 -904 5242 4282 3029 180 53 104 chr2 95251244 95251325 -155436529 + L1MB7 LINE L1 5255 5339 -845 2642 167 58 11 chr2 95251325 95251882 -155435972 + L1MC2 LINE L1 5761 6343 -1 3029 180 53 104 chr2 95251882 95252600 -155435254 + L1MB7 LINE L1 5339 5997 -187 879 167 6 52 chr2 95252600 95252774 -155435080 + FRAM SINE Alu 1 166 0 3029 180 53 104 chr2 95252774 95252953 -155434901 + L1MB7 LINE L1 5997 6184 0 4792 106 49 26 chr2 95253883 95254686 -155433168 - Tigger4(Zombi) DNA MER2_type 0 2731 1911 2495 160 119 0 chr2 95254689 95255158 -155432696 - Tigger4(Zombi) DNA MER2_type -2205 526 2 180 0 0 0 chr2 95256652 95256672 -155431182 + (A)n Simple_repeat Simple_repeat 1 20 0 654 178 96 22 chr2 95257808 95257943 -155429911 + AluSq SINE Alu 33 177 -136 298 351 33 12 chr2 95257973 95258215 -155429639 + L1PA16 LINE L1 5899 6145 -21 223 350 0 29 chr2 95258632 95258772 -155429082 + CT-rich Low_complexity Low_complexity 33 168 0 575 316 86 60 chr2 95261016 95261402 -155426452 - L1ME1 LINE L1 -5 6161 5766 19183 47 10 1 chr2 95261431 95265028 -155422826 - L1PA5 LINE L1 -6 6148 2524 887 176 19 56 chr2 95266483 95266653 -155421201 - SATR1 Satellite Satellite -121 349 187 2398 88 0 0 chr2 95266653 95266961 -155420893 + AluY SINE Alu 1 308 -3 887 176 19 56 chr2 95266961 95267006 -155420848 - SATR1 Satellite Satellite -283 187 142 271 98 33 0 chr2 95269766 95269827 -155418027 + (TA)n Simple_repeat Simple_repeat 2 64 0 1885 180 121 2 chr2 95269991 95270975 -155416879 - SATR1 Satellite Satellite -1 1100 1 2136 169 112 13 chr2 95270989 95273830 -155414024 - SATR1 Satellite Satellite -110 3120 1 1268 189 75 3 chr2 95273830 95274179 -155413675 + L1PA15 LINE L1 4964 5337 -809 347 134 75 0 chr2 95274179 95274246 -155413608 + LTR1B LTR ERV1 427 498 -328 4584 128 28 17 chr2 95274294 95274482 -155413372 + L1PA15 LINE L1 5347 5531 -634 3899 155 109 13 chr2 95274482 95275236 -155412618 + LTR1B LTR ERV1 1 826 0 4584 128 28 17 chr2 95275236 95275857 -155411997 + L1PA15 LINE L1 5531 6165 0 459 332 84 13 chr2 95275876 95276174 -155411680 + L1ME4a LINE L1 5646 5964 -157 318 195 13 13 chr2 95277342 95277419 -155410435 - L1ME1 LINE L1 -4 6162 6086 1123 264 101 39 chr2 95277427 95277675 -155410179 - L1M4 LINE L1 -2284 3862 3631 2278 107 3 3 chr2 95277675 95277985 -155409869 - AluSp SINE Alu -3 310 1 1123 264 101 39 chr2 95277985 95278031 -155409823 - L1M4 LINE L1 -2515 3631 3589 1478 209 64 3 chr2 95278031 95278375 -155409479 - MER47A DNA MER2_type -1 365 1 1123 264 101 39 chr2 95278375 95279066 -155408788 - L1M4 LINE L1 -2557 3589 2814 * 3112 224 119 19 chr2 95279063 95279639 -155408215 - L1MC4 LINE L1 -364 7678 7161 2004 135 3 3 chr2 95279639 95279936 -155407918 - AluSx SINE Alu -15 297 1 3112 224 119 19 chr2 95279936 95280438 -155407416 - L1MC4 LINE L1 -881 7161 6492 1582 202 92 26 chr2 95280926 95281501 -155406353 - L1MC4a LINE L1 -1317 6491 5879 575 311 121 22 chr2 95281563 95282324 -155405530 - L1MEc LINE L1 -5469 927 92 508 298 27 48 chr2 95282457 95282645 -155405209 - MER91B DNA MER1_type -6 184 1 559 246 153 16 chr2 95283182 95283430 -155404424 - MLT1D LTR MaLR -159 346 65 685 216 27 0 chr2 95283564 95283712 -155404142 + MLT1D LTR MaLR 43 194 -311 232 228 22 82 chr2 95284027 95284211 -155403643 + (CACCC)n Simple_repeat Simple_repeat 4 176 0 2077 93 10 42 chr2 95284476 95284786 -155403068 - AluSg SINE Alu -10 300 1 1492 206 15 6 chr2 95284947 95285287 -155402567 + L1M3 LINE L1 5480 5822 -361 516 215 0 0 chr2 95285303 95285396 -155402458 + AluJ/FLAM SINE Alu 10 102 -210 2108 118 0 3 chr2 95286001 95286290 -155401564 + AluSc SINE Alu 15 302 -7 2219 90 3 7 chr2 95286497 95286798 -155401056 + AluSq SINE Alu 1 300 -13 971 201 75 0 chr2 95288079 95288293 -155399561 - LOR1a LTR ERV1 0 497 268 507 221 103 0 chr2 95288301 95288446 -155399408 - LOR1b LTR ERV1 -273 188 29 1092 176 0 26 chr2 95289170 95289363 -155398491 + AluSx SINE Alu 1 188 -124 270 307 65 68 chr2 95289429 95289738 -155398116 + L3 LINE CR1 1151 1458 -119 368 315 122 11 chr2 95290612 95290793 -155397061 + L3 LINE CR1 1307 1507 -70 314 248 20 20 chr2 95292478 95292579 -155395275 + HsTC2 DNA Tc2 4 104 -1794 270 295 100 50 chr2 95292591 95292852 -155395002 - L1MEd LINE L1 -5493 626 353 350 191 0 48 chr2 95292894 95292978 -155394876 + HsTC2 DNA Tc2 1819 1898 0 1763 101 16 12 chr2 95293480 95293727 -155394127 - AluSg1 SINE Alu -18 291 44 396 286 42 0 chr2 95294202 95294321 -155393533 - MIR SINE MIR -60 202 79 1313 216 65 24 chr2 95295507 95295878 -155391976 + MLT1B LTR MaLR 3 388 -2 21 0 0 0 chr2 95296535 95296556 -155391298 + AT_rich Low_complexity Low_complexity 1 21 0 332 263 0 0 chr2 95297694 95297770 -155390084 + L1ME4a LINE L1 5976 6051 -70 875 158 0 14 chr2 95297822 95297968 -155389886 - AluJb SINE Alu -6 306 163 600 204 44 11 chr2 95297968 95298149 -155389705 + L1M1 LINE L1 3305 3491 -4074 273 330 0 0 chr2 95298152 95298252 -155389602 + A-rich Low_complexity Low_complexity 1 100 0 8828 219 74 25 chr2 95298284 95298838 -155389016 + L1MDa LINE L1 2555 3080 -3460 1855 77 61 0 chr2 95298838 95299084 -155388770 - AluY SINE Alu -12 299 39 8828 219 74 25 chr2 95299084 95301536 -155386318 + L1MDa LINE L1 3080 5710 -830 685 171 8 16 chr2 95302310 95302433 -155385421 - FLAM_C SINE Alu -21 122 1 1120 260 87 18 chr2 95302521 95303047 -155384807 + L2 LINE L2 2541 3097 -216 1326 209 22 35 chr2 95303051 95303362 -155384492 - AluJo SINE Alu -5 307 1 1450 171 22 61 chr2 95303371 95303733 -155384121 - MLT1D LTR MaLR -8 497 150 537 221 15 22 chr2 95303736 95303872 -155383982 + FLAM_C SINE Alu 9 143 0 1480 223 13 10 chr2 95303874 95304175 -155383679 + AluJo SINE Alu 1 302 -10 1983 269 54 40 chr2 95304272 95304684 -155383170 + MER21B LTR ERV1 20 425 -438 1267 194 28 81 chr2 95304684 95305004 -155382850 - AluJb SINE Alu -8 304 2 1983 269 54 40 chr2 95305004 95305082 -155382772 + MER21B LTR ERV1 425 500 -363 1823 170 3 10 chr2 95305082 95305376 -155382478 + AluJo SINE Alu 9 300 -12 1983 269 54 40 chr2 95305376 95305660 -155382194 + MER21B LTR ERV1 500 806 -57 2040 129 7 3 chr2 95306208 95306502 -155381352 + AluSx SINE Alu 1 295 -17 440 263 98 17 chr2 95306852 95306893 -155380961 + L1MC4 LINE L1 7608 7644 -398 2238 95 0 23 chr2 95306893 95307199 -155380655 - AluY SINE Alu -12 299 1 440 263 98 17 chr2 95307199 95307339 -155380515 + L1MC4 LINE L1 7644 7771 -271 279 0 0 0 chr2 95307339 95307370 -155380484 + (TG)n Simple_repeat Simple_repeat 2 32 0 440 263 98 17 chr2 95307370 95307475 -155380379 + L1MC4 LINE L1 7771 8042 0 2847 6 0 3 chr2 95309745 95310083 -155377771 + AluY SINE Alu 1 337 0 986 164 85 30 chr2 95310183 95310488 -155377366 - MER33 DNA MER1_type -2 322 1 26 0 0 0 chr2 95310643 95310669 -155377185 + AT_rich Low_complexity Low_complexity 1 26 0 250 105 0 0 chr2 95311018 95311056 -155376798 + FLAM_A SINE Alu 73 110 -23 1313 181 23 58 chr2 95312027 95312423 -155375431 - MLT2B3 LTR ERVL -2 552 183 2094 170 126 25 chr2 95312445 95313612 -155374242 - SATR1 Satellite Satellite -15 1284 1 235 269 0 0 chr2 95313862 95313914 -155373940 - L2 LINE L2 0 3272 3221 2159 112 14 0 chr2 95314006 95314301 -155373553 - AluSx SINE Alu -13 299 1 377 317 158 6 chr2 95314657 95314840 -155373014 - MER102a DNA MER1_type -3 327 117 259 254 31 31 chr2 95315215 95315345 -155372509 + GA-rich Low_complexity Low_complexity 2 131 0 320 179 0 0 chr2 95365437 95365493 -155322361 + AluSp/q SINE Alu 246 301 -2 567 184 0 0 chr2 95365499 95365597 -155322257 + LOR1b LTR ERV1 152 249 -212 356 87 52 52 chr2 95365699 95365814 -155322040 + (TATAA)n Simple_repeat Simple_repeat 5 119 0 1770 56 0 0 chr2 95365840 95366053 -155321801 + AluY SINE Alu 83 295 -16 2248 130 94 5 chr2 95366056 95366448 -155321406 - L1MA8 LINE L1 -12 6279 5853 432 293 139 31 chr2 95366609 95366998 -155320856 - L1M4 LINE L1 -1896 4250 3820 693 239 199 4 chr2 95367205 95367481 -155320373 - L1MB7 LINE L1 0 6184 5855 2308 76 0 3 chr2 95367510 95367813 -155320041 - AluY SINE Alu -9 302 1 217 288 55 14 chr2 95368056 95368129 -155319725 + MIR3 SINE MIR 88 163 -45 2097 108 3 3 chr2 95368942 95369247 -155318607 - AluSg SINE Alu -5 305 1 1340 214 110 30 chr2 95369639 95370522 -155317332 - L1MB7 LINE L1 -749 5397 2641 1029 234 0 33 chr2 95370525 95370799 -155317055 + AluJo SINE Alu 44 308 -4 1169 242 97 5 chr2 95370799 95371200 -155316654 - L1MB7 LINE L1 -3500 2646 2209 1236 281 164 8 chr2 95371300 95371805 -155316049 - L1MEc LINE L1 -5678 718 135 846 246 46 58 chr2 95371834 95372294 -155315560 + L1MDa LINE L1 335 1172 -5368 642 287 41 52 chr2 95372437 95372782 -155315072 - L1ME3A LINE L1 -222 5948 5539 595 159 179 20 chr2 95372782 95372933 -155314921 + MER69A DNA AcHobo 1 175 -2 642 287 41 52 chr2 95372933 95373061 -155314793 - L1ME3A LINE L1 -631 5539 5411 1176 107 10 41 chr2 95373760 95373916 -155313938 + L1MB3 LINE L1 5987 6137 -46 2206 72 3 42 chr2 95373916 95374223 -155313631 + AluSc SINE Alu 3 297 -12 1176 107 10 41 chr2 95374223 95374262 -155313592 + L1MB3 LINE L1 6137 6176 -7 2079 109 10 0 chr2 95374273 95374575 -155313279 + AluSx SINE Alu 1 305 -7 1155 159 33 106 chr2 95374588 95374651 -155313203 + L1MD2 LINE L1 5679 5745 -614 2011 142 0 7 chr2 95374651 95374961 -155312893 + AluSx SINE Alu 3 310 -2 1155 159 33 106 chr2 95374961 95375199 -155312655 + L1MD2 LINE L1 5745 5958 -401 4143 172 67 19 chr2 95375386 95376083 -155311771 - L1MB5 LINE L1 0 6174 5427 1839 119 0 51 chr2 95376083 95376431 -155311423 - AluSx SINE Alu 0 312 1 4143 172 67 19 chr2 95376431 95376586 -155311268 - L1MB5 LINE L1 -747 5427 5281 1023 52 0 0 chr2 95376619 95376755 -155311099 + AluY SINE Alu 175 310 -1 363 213 16 0 chr2 95377096 95377157 -155310697 - AluJ/FLAM SINE Alu -240 62 1 1945 124 29 10 chr2 95377213 95377557 -155310297 + AluSq SINE Alu 1 350 0 2930 256 33 3 chr2 95377558 95378217 -155309637 + ERVL LTR ERVL 1474 2152 -3612 795 162 21 0 chr2 95378220 95378362 -155309492 + FRAM SINE Alu 32 176 0 1726 167 45 18 chr2 95378366 95378696 -155309158 + L1MC/D LINE L1 5254 5592 -767 2341 97 0 0 chr2 95378722 95379033 -155308821 - AluSq SINE Alu -2 311 1 310 185 54 87 chr2 95380265 95380357 -155307497 - MIR3 SINE MIR -39 169 81 2211 67 37 0 chr2 95380598 95380897 -155306957 + AluSq SINE Alu 1 310 -3 2326 91 0 0 chr2 95381687 95381995 -155305859 + AluSg SINE Alu 1 308 -2 1488 163 24 10 chr2 95382588 95382882 -155304972 - AluJo SINE Alu -14 298 1 426 235 306 11 chr2 95383173 95383356 -155304498 - MIR SINE MIR -8 254 18 3778 144 63 9 chr2 95383635 95384315 -155303539 - LTR62 LTR ERVK -2 717 1 1235 158 35 60 chr2 95384465 95384710 -155303144 - L1 LINE L1 -1824 4322 4083 2182 94 3 0 chr2 95384710 95385009 -155302845 - AluSp SINE Alu -13 300 1 1235 158 35 60 chr2 95385009 95385048 -155302806 - L1 LINE L1 -2063 4083 4045 1293 190 3 52 chr2 95385049 95385338 -155302516 - MLT1B LTR MaLR -115 275 1 396 59 0 0 chr2 95385429 95385480 -155302374 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 377 272 34 15 chr2 95385988 95386212 -155301642 - L1MC/D LINE L1 -720 5431 5283 240 302 35 0 chr2 95386771 95386857 -155300997 + MIR SINE MIR 155 243 -19 2228 87 0 0 chr2 95387125 95387424 -155300430 - AluSq SINE Alu -2 311 13 1312 182 48 31 chr2 95387532 95387883 -155299971 + L1MDa LINE L1 1195 1551 -4989 881 156 81 20 chr2 95387907 95388196 -155299658 + L1M4 LINE L1 5187 5475 -699 239 97 0 0 chr2 95388203 95388234 -155299620 + L1M4 LINE L1 5563 5593 -581 1074 209 72 58 chr2 95389148 95389617 -155298237 + L1MC5 LINE L1 7303 7778 -183 387 283 17 8 chr2 95389885 95390005 -155297849 + MER104 DNA Tc2 60 180 0 2291 84 0 3 chr2 95390070 95390378 -155297476 + AluSg SINE Alu 1 307 -3 2733 10 0 0 chr2 95391176 95391481 -155296373 + AluYa5 SINE Alu 1 305 -6 1050 158 88 46 chr2 95391914 95392198 -155295656 - MER33 DNA MER1_type -28 296 1 254 319 0 0 chr2 95392618 95392687 -155295167 + L2 LINE L2 3235 3303 -10 479 113 0 153 chr2 95393586 95393678 -155294176 - L1MC5 LINE L1 -232 7729 7667 2116 120 0 0 chr2 95393678 95393978 -155293876 + AluSq SINE Alu 1 300 -13 479 113 0 153 chr2 95393978 95394035 -155293819 - L1MC5 LINE L1 -294 7667 7603 1654 168 30 24 chr2 95394448 95394745 -155293109 + AluJo SINE Alu 1 299 -13 1609 187 10 3 chr2 95394958 95395252 -155292602 + AluJo SINE Alu 1 296 -16 350 258 45 32 chr2 95396125 95396436 -155291418 - L1ME4a LINE L1 -74 6047 5708 483 214 15 46 chr2 95397078 95397209 -155290645 - MER104 DNA Tc2 -53 127 1 2065 83 21 3 chr2 95397318 95397608 -155290246 + AluY SINE Alu 1 295 -16 2516 59 0 0 chr2 95399442 95399748 -155288106 + AluY SINE Alu 1 306 -5 282 247 141 12 chr2 95400014 95400099 -155287755 + MLT1J2 LTR MaLR 110 205 -245 353 217 233 8 chr2 95400389 95400518 -155287336 - L2 LINE L2 -2 3311 3154 811 321 16 0 chr2 95400535 95400784 -155287070 + MIR SINE MIR 8 260 -2 2254 86 3 3 chr2 95402555 95402857 -155284997 + AluSx SINE Alu 1 302 -10 653 150 10 0 chr2 95403373 95403473 -155284381 + Tigger4(Zombi) DNA MER2_type 25 125 -2606 329 320 44 15 chr2 95403479 95403682 -155284172 - L2 LINE L2 -1193 2121 1913 2053 133 0 13 chr2 95403881 95404196 -155283658 - AluSx SINE Alu -1 311 1 2991 30 6 14 chr2 95404232 95404594 -155283260 - L1PA4 LINE L1 -3 6152 5794 2193 97 3 3 chr2 95404597 95404897 -155282957 - AluSc SINE Alu -9 300 1 2286 105 0 0 chr2 95405220 95405526 -155282328 - AluSq SINE Alu -7 306 1 312 286 29 80 chr2 95406291 95406420 -155281434 + L2 LINE L2 2952 3061 -252 1906 122 58 3 chr2 95406420 95406714 -155281140 + AluSx SINE Alu 1 310 -2 312 286 29 80 chr2 95406714 95406860 -155280994 + L2 LINE L2 3061 3213 -100 2057 106 3 0 chr2 95407003 95407327 -155280527 - AluSx SINE Alu 0 325 1 590 280 173 30 chr2 95407553 95407853 -155280001 + L2 LINE L2 2969 3311 -2 574 163 143 0 chr2 95408463 95408561 -155279293 + FLAM_C SINE Alu 10 121 -22 3214 203 18 77 chr2 95408807 95409837 -155278017 + LTR5 LTR ERVK 1 969 0 7906 67 4 20 chr2 95410250 95411274 -155276580 + LTR13 LTR ERVK 1 1007 0 250 338 118 15 chr2 95411467 95411574 -155276280 + L2 LINE L2 3164 3289 -24 2213 106 0 3 chr2 95411574 95411885 -155275969 - AluSg SINE Alu 0 310 1 250 338 118 15 chr2 95411885 95411913 -155275941 + L2 LINE L2 3289 3313 0 2706 265 63 2 chr2 95411982 95412487 -155275367 + L1MA2 LINE L1 5769 6304 0 1983 100 32 4 chr2 95412491 95412771 -155275083 - AluSc SINE Alu -21 288 1 680 269 18 12 chr2 95413825 95413996 -155273858 + MLT1J LTR MaLR 266 437 -74 239 298 57 24 chr2 95415561 95415685 -155272169 - LTR16C LTR ERVL -1 490 363 1806 249 190 48 chr2 95416859 95417374 -155270480 - L2 LINE L2 -94 3219 2779 198 71 0 0 chr2 95417374 95417402 -155270452 + (TGG)n Simple_repeat Simple_repeat 2 29 0 1806 249 190 48 chr2 95417402 95417442 -155270412 - L2 LINE L2 -534 2779 2746 2236 109 0 10 chr2 95417442 95417745 -155270109 + AluSc SINE Alu 1 300 -9 1806 249 190 48 chr2 95417745 95418146 -155269708 - L2 LINE L2 -567 2746 2112 553 261 97 0 chr2 95418147 95418281 -155269573 + MER5A DNA MER1_type 18 164 -25 3227 141 34 11 chr2 95418289 95418822 -155269032 + Tigger3b DNA MER2_type 2 546 -685 1732 132 12 4 chr2 95418823 95419081 -155268773 - AluSx SINE Alu -2 310 51 717 147 62 0 chr2 95419106 95419235 -155268619 + Tigger3b DNA MER2_type 753 889 -342 242 182 167 0 chr2 95419235 95419301 -155268553 + LOR1a LTR ERV1 1 77 -420 2125 96 0 7 chr2 95419301 95419592 -155268262 - AluY SINE Alu 0 311 23 221 148 66 66 chr2 95420225 95420286 -155267568 - MIR SINE MIR -62 146 86 1704 175 4 7 chr2 95422653 95422927 -155264927 + AluJo SINE Alu 20 292 -20 328 227 125 0 chr2 95423031 95423119 -155264735 + MIR SINE MIR 79 177 -85 2588 63 0 0 chr2 95424806 95425106 -155262748 - AluY SINE Alu -10 301 2 1023 130 0 6 chr2 95425744 95426104 -155261750 + (TGAG)n Simple_repeat Simple_repeat 1 359 0 235 276 13 0 chr2 95426935 95427011 -155260843 - MER103 DNA DNA -19 147 71 24 0 0 0 chr2 95427479 95427503 -155260351 + AT_rich Low_complexity Low_complexity 1 24 0 639 260 23 63 chr2 95427652 95427952 -155259902 + L1MC4a LINE L1 5647 5934 -1874 24 32 0 0 chr2 95427971 95428002 -155259852 + AT_rich Low_complexity Low_complexity 1 31 0 22 88 0 0 chr2 95428240 95428297 -155259557 + AT_rich Low_complexity Low_complexity 1 57 0 957 276 9 0 chr2 95428469 95428686 -155259168 + MER58A DNA MER1_type 3 221 -3 1647 189 28 0 chr2 95429584 95429869 -155257985 + AluJo SINE Alu 1 293 -19 379 239 103 19 chr2 95430794 95430949 -155256905 - L1ME4a LINE L1 -149 5972 5805 2321 100 0 3 chr2 95431130 95431429 -155256425 - AluSq SINE Alu -15 298 1 183 156 0 0 chr2 95431435 95431467 -155256387 + (CATATA)n Simple_repeat Simple_repeat 3 34 0 2551 65 0 3 chr2 95431786 95432092 -155255762 + AluY SINE Alu 1 305 -6 2263 84 0 3 chr2 95432258 95432571 -155255283 + AluY SINE Alu 1 312 0 225 277 0 15 chr2 95433722 95433787 -155254067 + L1MC/D LINE L1 5872 5935 -1873 2404 83 3 3 chr2 95434051 95434351 -155253503 - AluSg SINE Alu -10 300 1 46 78 0 0 chr2 95434356 95434458 -155253396 + AT_rich Low_complexity Low_complexity 1 102 0 309 358 111 28 chr2 95435298 95435759 -155252095 + L2 LINE L2 2468 2966 -348 3328 147 59 79 chr2 95435884 95436520 -155251334 + L1MB7 LINE L1 4835 5482 -702 1687 207 0 7 chr2 95436520 95436820 -155251034 + AluJo SINE Alu 1 298 -14 3328 147 59 79 chr2 95436820 95436985 -155250869 + L1MB7 LINE L1 5482 5649 -535 1668 133 8 8 chr2 95436985 95437240 -155250614 + AluJo SINE Alu 13 267 -45 3328 147 59 79 chr2 95437240 95437795 -155250059 + L1MB7 LINE L1 5649 6175 -9 451 314 81 5 chr2 95437803 95437988 -155249866 + MIR SINE MIR 21 219 -43 2385 82 13 0 chr2 95438028 95438334 -155249520 + AluSg SINE Alu 1 310 0 264 221 8 150 chr2 95438367 95438494 -155249360 - MER46C DNA MER2_type -228 110 2 331 252 29 19 chr2 95438674 95438777 -155249077 - MIR3 SINE MIR -24 184 81 2590 237 145 6 chr2 95439941 95441036 -155246818 - MERVL LTR ERVL -888 4597 3349 847 161 60 45 chr2 95441062 95441261 -155246593 - L1MD2 LINE L1 -13 6346 6145 190 295 96 6 chr2 95441536 95441692 -155246162 + L2 LINE L2 1933 2102 -1212 592 285 136 40 chr2 95441714 95442245 -155245609 + L2 LINE L2 2641 3284 -29 309 238 48 12 chr2 95442970 95443054 -155244800 - MER103 DNA DNA -1 165 79 32689 84 18 11 chr2 95443430 95448177 -155239677 + L1P LINE L1 11 4788 -1358 1185 84 10 5 chr2 95448294 95448700 -155239154 + (TGAG)n Simple_repeat Simple_repeat 1 408 0 472 275 3 3 chr2 95449046 95449355 -155238499 + (CA)n Simple_repeat Simple_repeat 1 309 0 419 210 101 65 chr2 95450497 95450635 -155237219 - MIR SINE MIR -106 156 14 252 86 0 0 chr2 95451043 95451078 -155236776 + (GGAGA)n Simple_repeat Simple_repeat 4 38 0 299 230 35 58 chr2 95451303 95451390 -155236464 + MER5B DNA MER1_type 88 172 -6 216 253 59 46 chr2 95452323 95452463 -155235391 - MIR SINE MIR -68 140 41 1290 207 59 3 chr2 95453050 95453355 -155234499 + L1MB8 LINE L1 5857 6178 0 520 231 95 7 chr2 95455848 95455995 -155231859 + MIR SINE MIR 98 257 -5 2209 107 14 0 chr2 95456032 95456321 -155231533 + AluSx SINE Alu 1 293 -19 1704 183 3 10 chr2 95457399 95457711 -155230143 - AluJb SINE Alu -2 310 1 279 54 0 0 chr2 95457754 95457791 -155230063 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 321 239 109 35 chr2 95458569 95458753 -155229101 - MIR SINE MIR -36 226 33 257 327 121 18 chr2 95459592 95459757 -155228097 + L3 LINE CR1 439 620 -957 265 348 30 15 chr2 95459775 95459910 -155227944 - L1ME3A LINE L1 0 6170 6034 * 1252 245 43 23 chr2 95459905 95460256 -155227598 - L1ME3A LINE L1 -54 6116 5759 256 385 0 8 chr2 95460329 95460446 -155227408 + L3 LINE CR1 741 856 -721 944 159 0 0 chr2 95463174 95463312 -155224542 + FRAM SINE Alu 9 146 -30 190 29 57 29 chr2 95463312 95463347 -155224507 + (TAAAA)n Simple_repeat Simple_repeat 1 36 0 237 132 0 0 chr2 95463689 95463727 -155224127 + (GGAGAA)n Simple_repeat Simple_repeat 5 42 0 253 273 218 0 chr2 95464486 95464596 -155223258 - MIR SINE MIR -12 250 117 724 236 153 0 chr2 95466515 95466718 -155221136 - MIR SINE MIR -21 241 8 257 225 84 0 chr2 95467241 95467312 -155220542 + MIR SINE MIR 109 185 -77 189 286 54 0 chr2 95467381 95467437 -155220417 - L2 LINE L2 -821 2493 2435 257 318 38 30 chr2 95468461 95468593 -155219261 - MIR SINE MIR -48 214 82 1731 177 35 0 chr2 95468884 95469172 -155218682 + AluJo SINE Alu 5 302 -10 276 304 55 46 chr2 95470495 95470712 -155217142 - HAL1 LINE L1 0 2507 2289 761 154 62 0 chr2 95470719 95470849 -155217005 + BC200 scRNA scRNA 2 139 -61 691 254 82 102 chr2 95470868 95471217 -155216637 - HAL1 LINE L1 -231 2276 1921 1459 143 27 0 chr2 95471217 95471441 -155216413 - AluJo SINE Alu -14 298 69 691 254 82 102 chr2 95471441 95471874 -155215980 - HAL1 LINE L1 -586 1921 1510 2468 92 0 0 chr2 95471979 95472285 -155215569 - AluSg SINE Alu -4 306 1 267 31 0 0 chr2 95472388 95472420 -155215434 + AluY SINE Alu 261 292 -16 2765 234 60 34 chr2 95472450 95473276 -155214578 - L1ME1 LINE L1 -6 6160 5313 1880 217 60 2 chr2 95473307 95473727 -155214127 + MER82 DNA MER2_type 7 450 -203 855 220 12 39 chr2 95473728 95473827 -155214027 + L1M4 LINE L1 5064 5164 -982 2311 79 0 20 chr2 95473827 95474130 -155213724 + AluY SINE Alu 1 297 -14 855 220 12 39 chr2 95474130 95474285 -155213569 + L1M4 LINE L1 5164 5311 -835 2053 130 3 20 chr2 95474286 95474585 -155213269 + AluSx SINE Alu 1 294 -18 487 206 53 35 chr2 95474585 95474770 -155213084 - L1ME1 LINE L1 -1664 4482 4301 2394 108 0 0 chr2 95475023 95475330 -155212524 + AluSx SINE Alu 1 307 -5 544 249 53 22 chr2 95475373 95475614 -155212240 - L1MC4a LINE L1 -303 5818 5632 1031 215 13 40 chr2 95477082 95477384 -155210470 - L1MC4 LINE L1 -40 8002 7709 233 286 13 52 chr2 95477399 95477476 -155210378 + MIR3 SINE MIR 132 205 -3 901 118 0 22 chr2 95479140 95479275 -155208579 + FLAM_C SINE Alu 1 132 -1 181 257 257 43 chr2 95479436 95479576 -155208278 - L2 LINE L2 0 3313 3144 324 157 100 0 chr2 95480010 95480080 -155207774 + L1ME LINE L1 5586 5662 -459 328 175 62 12 chr2 95480127 95480207 -155207647 - MIR SINE MIR -7 255 172 312 208 156 52 chr2 95480210 95480306 -155207548 + L1ME LINE L1 5721 5826 -295 2301 98 0 7 chr2 95480306 95480613 -155207241 + AluSc SINE Alu 1 305 -4 448 174 152 45 chr2 95480624 95480756 -155207098 - MIR SINE MIR 0 262 117 418 278 59 94 chr2 95480839 95481205 -155206649 + L1ME4a LINE L1 4783 5952 -210 2328 120 0 0 chr2 95481378 95481687 -155206167 + AluSx SINE Alu 1 309 -3 443 257 158 18 chr2 95481712 95481883 -155205971 + L1ME4a LINE L1 5926 6120 -1 2240 206 43 29 chr2 95481906 95482460 -155205394 + MER68 LTR ERV1 1 562 0 256 375 116 9 chr2 95482471 95482634 -155205220 - L2 LINE L2 -621 2693 2549 2353 102 0 13 chr2 95482634 95482947 -155204907 + AluSg SINE Alu 1 309 -1 256 375 116 9 chr2 95482947 95483111 -155204743 - L2 LINE L2 -765 2549 2331 757 298 32 20 chr2 95484066 95484314 -155203540 + MIR SINE MIR 1 251 -11 2129 114 17 0 chr2 95484381 95484678 -155203176 - AluSx SINE Alu -10 302 1 189 312 172 11 chr2 95485539 95485632 -155202222 - L2 LINE L2 -8 3264 3157 2439 78 0 3 chr2 95485708 95486004 -155201850 - AluSc SINE Alu -12 297 3 2365 100 3 0 chr2 95486286 95486585 -155201269 - AluSq SINE Alu -13 300 1 2660 42 0 10 chr2 95486616 95486929 -155200925 - AluY SINE Alu -1 310 1 373 232 320 0 chr2 95488916 95489041 -155198813 - MER5B DNA MER1_type -13 165 1 1403 180 63 9 chr2 95489145 95489478 -155198376 - L1MA3 LINE L1 0 6305 5955 255 236 79 11 chr2 95492206 95492295 -155195559 + MLT1I LTR MaLR 309 403 -6 619 333 17 14 chr2 95493665 95493959 -155193895 + MLT1I LTR MaLR 70 364 -45 502 314 35 67 chr2 95494333 95494588 -155193266 + MIR SINE MIR 13 259 -3 364 281 12 0 chr2 95494639 95494721 -155193133 - MIR SINE MIR -120 142 60 1293 99 86 0 chr2 95495310 95495531 -155192323 - LTR56 LTR ERV1 -179 266 27 2626 226 39 45 chr2 95495822 95496535 -155191319 + MER21B LTR ERV1 48 756 -107 706 142 78 35 chr2 95496983 95497124 -155190730 + MLT1B LTR MaLR 1 147 -243 537 165 46 9 chr2 95497126 95497235 -155190619 + MLT1B LTR MaLR 260 372 -2 1948 138 3 0 chr2 95498272 95498561 -155189293 - AluSq SINE Alu -1 312 23 181 328 0 0 chr2 95498726 95498784 -155189070 - L2 LINE L2 -5 3267 3210 255 114 0 0 chr2 95500261 95500305 -155187549 + (CA)n Simple_repeat Simple_repeat 1 44 0 26 30 0 0 chr2 95501744 95501777 -155186077 + AT_rich Low_complexity Low_complexity 1 33 0 1085 163 6 0 chr2 95502281 95502447 -155185407 + AluSg/x SINE Alu 132 298 -14 816 133 0 16 chr2 95502591 95502719 -155185135 + FLAM_C SINE Alu 1 126 -7 1575 150 10 119 chr2 95502741 95502827 -155185027 + L1MD2 LINE L1 6008 6102 -257 2163 147 0 0 chr2 95502827 95503134 -155184720 - 7SLRNA srpRNA srpRNA -13 307 1 1575 150 10 119 chr2 95503134 95503434 -155184420 + L1MD2 LINE L1 6102 6352 -7 377 258 86 26 chr2 95503472 95503623 -155184231 + MIR3 SINE MIR 30 189 -19 554 138 0 0 chr2 95504127 95504214 -155183640 + AluS SINE Alu 220 306 -3 668 159 0 48 chr2 95504252 95504441 -155183413 + GA-rich Low_complexity Low_complexity 1 180 0 804 329 16 6 chr2 95504449 95504768 -155183086 - ERVL LTR ERVL -4327 1437 1116 2731 222 56 8 chr2 95504770 95505601 -155182253 + L1MD1 LINE L1 2 935 -5924 2470 36 10 0 chr2 95505648 95505956 -155181898 - MER11C LTR ERVK 0 1071 761 1724 42 0 5 chr2 95506057 95506269 -155181585 - MER11C LTR ERVK -860 211 1 597 181 48 36 chr2 95506271 95506326 -155181528 + L1MD1 LINE L1 5595 5648 -1309 2661 175 52 8 chr2 95506326 95506823 -155181031 + LTR53 LTR ERVL 1 519 0 597 181 48 36 chr2 95506823 95506933 -155180921 + L1MD1 LINE L1 5648 5762 -1195 2322 110 0 7 chr2 95507036 95507346 -155180508 + AluSx SINE Alu 1 308 -4 3337 156 24 26 chr2 95507353 95507763 -155180091 + L1MD1 LINE L1 6000 6407 -646 2398 100 0 0 chr2 95507763 95508064 -155179790 + AluSg SINE Alu 1 301 -9 3337 156 24 26 chr2 95508064 95508360 -155179494 + L1MD1 LINE L1 6407 6702 -351 964 205 0 0 chr2 95508360 95508526 -155179328 + AluJb SINE Alu 134 299 -13 1125 132 44 19 chr2 95508534 95508705 -155179149 + L1MD1 LINE L1 6698 6876 -177 2084 136 26 15 chr2 95508705 95509044 -155178810 - MER2 DNA MER2_type 0 344 2 1125 132 44 19 chr2 95509044 95509077 -155178777 + L1MD1 LINE L1 6876 6907 -146 721 202 5 54 chr2 95509192 95509415 -155178439 - L1MB8 LINE L1 -2 6176 5965 * 3094 199 41 8 chr2 95509413 95510120 -155177734 - L1MB8 LINE L1 -1048 5098 4369 228 67 0 0 chr2 95510120 95510150 -155177704 + (TTCC)n Simple_repeat Simple_repeat 2 31 0 808 153 0 0 chr2 95510151 95510269 -155177585 - AluJb SINE Alu -1 311 194 1976 131 35 0 chr2 95510428 95510710 -155177144 - AluSx SINE Alu -20 292 1 2500 243 48 94 chr2 95510710 95511968 -155175886 + MER77-int LTR ERV1 3411 4610 -2191 2146 154 118 8 chr2 95511971 95512353 -155175501 + MSTA LTR MaLR 5 428 0 4492 164 5 3 chr2 95512353 95513128 -155174726 + MSTA-int LTR MaLR 1 777 -874 652 147 21 1 chr2 95513247 95513381 -155174473 + MSTA LTR MaLR 1 147 -218 2629 60 3 9 chr2 95513409 95513757 -155174097 + L1PA6 LINE L1 5806 6151 -3 21 36 0 0 chr2 95513763 95513791 -155174063 + AT_rich Low_complexity Low_complexity 1 28 0 2045 127 25 3 chr2 95513802 95514085 -155173769 + AluSx SINE Alu 1 289 -23 1277 86 22 121 chr2 95514113 95514159 -155173695 + L1PB1 LINE L1 5929 5978 -173 2312 106 0 3 chr2 95514159 95514462 -155173392 + AluSg SINE Alu 1 302 -8 1277 86 22 121 chr2 95514462 95514647 -155173207 + L1PB1 LINE L1 5978 6137 -14 304 114 0 0 chr2 95514647 95514691 -155173163 + MSTA LTR MaLR 385 428 0 7575 227 37 22 chr2 95514691 95516488 -155171366 + MER77-int LTR ERV1 4597 6421 -380 693 175 0 0 chr2 95516590 95516704 -155171150 + MER77-int LTR ERV1 6686 6799 -2 2329 109 6 3 chr2 95516803 95517115 -155170739 + AluSp SINE Alu 1 313 0 311 290 22 65 chr2 95517120 95517217 -155170637 + MER77 LTR ERV1 66 157 -448 2868 114 61 25 chr2 95517217 95517692 -155170162 + LTR22B LTR ERVK 1 492 0 311 290 22 65 chr2 95517692 95517732 -155170122 + MER77 LTR ERV1 157 197 -408 * 1041 271 60 91 chr2 95517705 95518333 -155169521 + MER21B LTR ERV1 98 706 -157 1670 120 73 54 chr2 95518610 95519166 -155168688 + MER4D LTR ERV1 1 593 -186 21 0 0 0 chr2 95520789 95520810 -155167044 + AT_rich Low_complexity Low_complexity 1 21 0 1155 235 99 31 chr2 95521594 95522143 -155165711 + MLT1E3 LTR MaLR 1 622 -2 311 297 0 10 chr2 95522220 95522321 -155165533 - MER5B DNA MER1_type -78 100 1 342 277 42 0 chr2 95524844 95524963 -155162891 + MER69 DNA AcHobo 11 134 -1092 538 143 16 31 chr2 95525071 95525314 -155162540 + AluJb SINE Alu 2 303 -9 423 322 40 7 chr2 95525318 95525467 -155162387 + MIR SINE MIR 28 181 -81 505 189 21 1 chr2 95525578 95525687 -155162167 - MLT1C LTR MaLR -1 466 369 2555 52 0 0 chr2 95526511 95526800 -155161054 - AluY SINE Alu -14 297 9 259 164 66 0 chr2 95526895 95526956 -155160898 - MIR SINE MIR -106 156 92 372 274 17 9 chr2 95527001 95527132 -155160722 + MIR SINE MIR 9 139 -69 1853 179 0 13 chr2 95527800 95528102 -155159752 + AluJo SINE Alu 1 298 -14 482 274 151 12 chr2 95528238 95528483 -155159371 - MLT1L LTR MaLR -10 605 327 1825 214 112 13 chr2 95528516 95528988 -155158866 + LTR53 LTR ERVL 1 519 0 228 356 51 0 chr2 95529006 95529124 -155158730 + L2 LINE L2 3183 3306 -7 249 313 0 0 chr2 95529154 95529237 -155158617 - MLT1L LTR MaLR -386 229 147 1870 211 27 29 chr2 95529352 95529802 -155158052 + MER74C LTR ERVL 12 460 0 749 322 10 0 chr2 95530191 95530396 -155157458 + HERVL74 LTR ERVL 414 620 -5065 2061 203 67 2 chr2 95530402 95530850 -155157004 + HERVL74 LTR ERVL 2256 2732 -2953 2220 100 30 0 chr2 95531384 95531684 -155156170 + AluSx SINE Alu 1 309 -3 1068 151 0 35 chr2 95531700 95531872 -155155982 + AluJo SINE Alu 2 167 -145 575 283 51 6 chr2 95532759 95532936 -155154918 - MIR SINE MIR -12 250 66 524 163 0 0 chr2 95532943 95533059 -155154795 - AluJb SINE Alu 0 307 192 1963 178 8 8 chr2 95536773 95537138 -155150716 + MLT1A1 LTR MaLR 1 365 0 236 259 12 25 chr2 95537746 95537827 -155150027 + L2 LINE L2 2994 3073 -199 281 281 150 39 chr2 95537978 95538131 -155149723 - MER5A DNA MER1_type -6 183 14 186 310 14 14 chr2 95538159 95538230 -155149624 + MIR SINE MIR 35 105 -103 21 0 0 0 chr2 95541315 95541336 -155146518 + GC_rich Low_complexity Low_complexity 1 21 0 601 214 38 6 chr2 95542339 95542498 -155145356 - L1ME1 LINE L1 -121 6045 5882 1531 112 0 0 chr2 95542531 95542737 -155145117 + AluSg/x SINE Alu 105 310 -2 2090 91 33 0 chr2 95542747 95543046 -155144808 + AluSp SINE Alu 1 308 0 795 197 64 22 chr2 95543046 95543278 -155144576 + MLT1G LTR MaLR 166 424 -118 2028 151 74 20 chr2 95543278 95543681 -155144173 - MSTB LTR MaLR 0 426 2 795 197 64 22 chr2 95543681 95543794 -155144060 + MLT1G LTR MaLR 424 531 -11 348 267 50 8 chr2 95543954 95544074 -155143780 + L1MEd LINE L1 11 135 -5984 1746 173 7 3 chr2 95544106 95544389 -155143465 + AluJb SINE Alu 1 284 -28 9392 100 31 20 chr2 95594390 95595349 -155092505 + Tigger1 DNA MER2_type 764 1745 -673 2577 62 0 0 chr2 95595349 95595655 -155092199 + AluSq SINE Alu 1 306 -7 9392 100 31 20 chr2 95595655 95596090 -155091764 + Tigger1 DNA MER2_type 1745 2174 -244 356 78 0 0 chr2 95596092 95596143 -155091711 - Alu SINE Alu -3 298 248 1988 127 0 7 chr2 95596146 95596422 -155091432 - AluSx SINE Alu -38 274 1 445 122 40 0 chr2 95596422 95596496 -155091358 + Tigger1 DNA MER2_type 2288 2364 -54 24454 176 26 18 chr2 95596648 95599306 -155088548 + L1PA16 LINE L1 1 2636 -4968 7686 45 8 12 chr2 95599306 95600848 -155087006 + SVA Other Other 4 1383 -3 24454 176 26 18 chr2 95600848 95601738 -155086116 + L1PA16 LINE L1 2636 3517 -4087 2309 59 12 71 chr2 95601738 95602061 -155085793 - AluY SINE Alu -7 304 1 24454 176 26 18 chr2 95602061 95604997 -155082857 + L1PA16 LINE L1 3517 7595 -9 774 232 69 108 chr2 95604999 95605434 -155082420 - MER41-int LTR ERV1 -2363 2573 2156 225 0 0 0 chr2 95605434 95605459 -155082395 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 652 209 0 0 chr2 95605463 95605573 -155082281 - FLAM_A SINE Alu -32 110 1 1189 245 53 47 chr2 95605588 95605684 -155082170 - MER41-int LTR ERV1 -2749 2187 2093 306 73 0 0 chr2 95605684 95605725 -155082129 + (TA)n Simple_repeat Simple_repeat 1 41 0 2360 80 0 25 chr2 95605725 95606039 -155081815 - AluSg SINE Alu -4 306 1 1189 245 53 47 chr2 95606039 95606492 -155081362 - MER41-int LTR ERV1 -2842 2094 1634 1077 176 29 47 chr2 95606704 95606982 -155080872 - MER41-int LTR ERV1 -3423 1513 1241 23 54 0 0 chr2 95606983 95607020 -155080834 + AT_rich Low_complexity Low_complexity 1 37 0 180 57 0 0 chr2 95607021 95607320 -155080534 + AT_rich Low_complexity Low_complexity 1 299 0 262 273 12 19 chr2 95607342 95607503 -155080351 + (TAAA)n Simple_repeat Simple_repeat 3 162 0 926 178 65 40 chr2 95607536 95607811 -155080043 - MER41-int LTR ERV1 -3667 1269 988 288 259 62 0 chr2 95608216 95608297 -155079557 - MER41-int LTR ERV1 -4496 1450 1365 494 120 67 0 chr2 95608504 95608579 -155079275 - LTR10B LTR ERV1 0 547 468 44359 44 4 0 chr2 95608579 95614703 -155073151 - L1PA4 LINE L1 -2 6153 7 1586 180 113 36 chr2 95614706 95615156 -155072698 - LTR10B LTR ERV1 -62 485 1 1731 237 121 12 chr2 95615295 95615784 -155072070 - MER34 LTR ERV1 0 542 1 226 337 10 10 chr2 95615978 95616076 -155071778 - MLT1J1 LTR MaLR -285 161 64 2213 113 0 0 chr2 95617786 95618087 -155069767 - AluSq SINE Alu -12 301 1 884 287 26 52 chr2 95618898 95619320 -155068534 + MLT1J LTR MaLR 100 510 -1 1211 238 158 30 chr2 95619408 95619971 -155067883 + MLT1E2 LTR MaLR 6 626 0 347 291 138 12 chr2 95620002 95620256 -155067598 - HAL1 LINE L1 -4 2503 2218 2119 119 6 13 chr2 95620300 95620612 -155067242 - AluSx SINE Alu -2 310 1 243 0 0 0 chr2 95620842 95620869 -155066985 + (CA)n Simple_repeat Simple_repeat 1 27 0 481 322 104 16 chr2 95620876 95621193 -155066661 - HAL1 LINE L1 -625 1882 1538 2677 164 12 0 chr2 95622001 95622355 -155065499 + MSTB LTR MaLR 1 362 -64 2057 125 34 0 chr2 95622355 95622651 -155065203 - AluSx SINE Alu -6 306 1 2677 164 12 0 chr2 95622651 95622717 -155065137 + MSTB LTR MaLR 362 426 0 672 179 0 34 chr2 95622846 95622963 -155064891 - FRAM SINE Alu -16 160 48 339 336 13 40 chr2 95623749 95623898 -155063956 - MER5A DNA MER1_type 0 189 45 206 336 35 35 chr2 95624531 95624647 -155063207 - L3 LINE CR1 -585 992 877 195 42 0 0 chr2 95626223 95626247 -155061607 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1405 191 74 3 chr2 95626273 95626556 -155061298 - AluSq SINE Alu 0 303 1 254 324 221 22 chr2 95626665 95626937 -155060917 - L2 LINE L2 -37 3235 2910 1524 60 0 25 chr2 95629839 95630039 -155057815 - AluY SINE Alu -12 299 105 204 174 22 22 chr2 95630351 95630397 -155057457 - L2 LINE L2 -43 3270 3225 403 254 66 16 chr2 95631473 95631595 -155056259 + MIR3 SINE MIR 76 203 -5 371 328 25 0 chr2 95632145 95632264 -155055590 + MIR SINE MIR 28 149 -113 275 372 31 8 chr2 95634209 95634338 -155053516 - MIR SINE MIR -20 242 111 222 37 0 0 chr2 95635652 95635679 -155052175 + (GGGTG)n Simple_repeat Simple_repeat 4 30 0 2346 81 0 0 chr2 95635779 95636087 -155051767 - AluSc SINE Alu -1 308 1 688 256 0 0 chr2 95636813 95636946 -155050908 + MER91A DNA MER1_type 1 133 -63 1605 160 6 58 chr2 95637127 95637440 -155050414 - AluJb SINE Alu -2 310 14 305 269 40 8 chr2 95640102 95640222 -155047632 + MIR3 SINE MIR 57 181 -27 360 0 0 0 chr2 95640264 95640304 -155047550 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 381 330 150 13 chr2 95640306 95640539 -155047315 - L2 LINE L2 -7 3306 3042 2258 118 80 53 chr2 95640663 95640709 -155047145 - MSTB LTR MaLR 0 426 383 1601 175 14 24 chr2 95640709 95641006 -155046848 + AluJb SINE Alu 5 298 -14 2258 118 80 53 chr2 95641006 95641373 -155046481 - MSTB LTR MaLR -43 383 2 360 271 0 0 chr2 95642367 95642452 -155045402 + MIR SINE MIR 53 137 -71 282 396 24 18 chr2 95642645 95642814 -155045040 - MIR SINE MIR -47 215 46 687 134 0 0 chr2 95643151 95643270 -155044584 + (TCCCC)n Simple_repeat Simple_repeat 5 123 0 228 122 0 0 chr2 95644363 95644404 -155043450 + (TG)n Simple_repeat Simple_repeat 1 41 0 200 284 14 40 chr2 95645225 95645299 -155042555 - L3b LINE CR1 -186 1397 1326 247 289 0 63 chr2 95646056 95646215 -155041639 + C-rich Low_complexity Low_complexity 2 150 0 503 257 35 35 chr2 95647034 95647178 -155040676 + MIR SINE MIR 119 262 0 1511 101 0 0 chr2 95647320 95647555 -155040299 - AluJb SINE Alu 0 319 85 462 342 69 40 chr2 95647701 95648068 -155039786 - L1MCb LINE L1 -4908 1137 864 406 255 92 43 chr2 95648348 95648489 -155039365 - L1MCa LINE L1 -4314 2112 1965 220 274 266 32 chr2 95649383 95649507 -155038347 - MIR SINE MIR 0 262 110 262 157 14 14 chr2 95650675 95650745 -155037109 + CT-rich Low_complexity Low_complexity 2 71 0 422 316 45 12 chr2 95651790 95651954 -155035900 + MIR SINE MIR 33 201 -52 2165 117 0 7 chr2 95652026 95652335 -155035519 + AluJb SINE Alu 1 307 -5 201 74 0 0 chr2 95652625 95652652 -155035202 + (A)n Simple_repeat Simple_repeat 1 27 0 502 103 23 0 chr2 95653654 95653741 -155034113 + (GA)n Simple_repeat Simple_repeat 1 89 0 500 260 114 35 chr2 95654718 95654972 -155032882 - MLT1J LTR MaLR -14 497 224 363 297 149 7 chr2 95656399 95656547 -155031307 - MIR SINE MIR -63 199 31 434 341 88 0 chr2 95657902 95658119 -155029735 + MIR SINE MIR 15 250 -12 252 250 0 0 chr2 95658344 95658424 -155029430 + (TG)n Simple_repeat Simple_repeat 1 80 0 205 360 140 0 chr2 95658853 95658989 -155028865 - MER5B DNA MER1_type -18 160 6 409 292 46 0 chr2 95659099 95659229 -155028625 - MIR SINE MIR -71 191 56 929 219 84 3 chr2 95660300 95660587 -155027267 - MER33 DNA MER1_type 0 324 15 643 258 75 12 chr2 95660674 95660926 -155026928 + MER113 DNA MER1_type? 45 312 -209 294 309 26 31 chr2 95661003 95661194 -155026660 - MER90 LTR ERV1 0 614 425 4083 241 30 2 chr2 95661807 95662858 -155024996 - L1MD2 LINE L1 -2 6357 5277 331 255 39 20 chr2 95663921 95664023 -155023831 + MIR SINE MIR 83 186 -76 306 293 0 0 chr2 95664480 95664613 -155023241 + (TG)n Simple_repeat Simple_repeat 1 133 0 2241 95 7 0 chr2 95665919 95666214 -155021640 - AluSx SINE Alu -15 297 1 282 242 152 10 chr2 95666437 95666536 -155021318 + MIR3 SINE MIR 81 193 -15 388 286 30 6 chr2 95667666 95667834 -155020020 + (CA)n Simple_repeat Simple_repeat 1 172 0 600 148 0 0 chr2 95670406 95670514 -155017340 + (CA)n Simple_repeat Simple_repeat 1 108 0 451 349 0 0 chr2 95670934 95671103 -155016751 - HERVL LTR ERVL -434 5220 5052 340 283 24 28 chr2 95671141 95671302 -155016552 - HERVL LTR ERVL -513 4972 4811 443 277 63 3 chr2 95672521 95672758 -155015096 - HERVL LTR ERVL -2380 3384 3085 287 298 139 43 chr2 95672886 95673232 -155014622 - MLT1J LTR MaLR -25 486 108 214 254 197 0 chr2 95675517 95675588 -155012266 + L2 LINE L2 3229 3313 0 434 236 6 55 chr2 95677363 95677545 -155010309 + C-rich Low_complexity Low_complexity 1 173 0 246 333 71 54 chr2 95678047 95678287 -155009567 - LTR37B LTR ERV1 -25 443 200 445 165 41 21 chr2 95678470 95678567 -155009287 + MIR SINE MIR 58 156 -106 1847 173 10 0 chr2 95678573 95678873 -155008981 + AluJb SINE Alu 1 303 -9 333 286 168 0 chr2 95678953 95679072 -155008782 + MIR SINE MIR 84 222 -40 225 333 37 0 chr2 95679132 95679213 -155008641 + MIR3 SINE MIR 116 199 -9 2287 39 3 11 chr2 95680720 95681047 -155006807 + AluY SINE Alu 1 325 0 2264 99 0 0 chr2 95681121 95681423 -155006431 + AluSg SINE Alu 1 302 -8 740 181 0 11 chr2 95682070 95682252 -155005602 + (CA)n Simple_repeat Simple_repeat 1 180 0 729 196 0 0 chr2 95682274 95682617 -155005237 + (CA)n Simple_repeat Simple_repeat 1 343 0 671 200 4 15 chr2 95682629 95682906 -155004948 + (CA)n Simple_repeat Simple_repeat 1 273 0 241 360 88 0 chr2 95683187 95683301 -155004553 + L2 LINE L2 2697 2820 -494 261 331 125 20 chr2 95683570 95683818 -155004036 - HERVL LTR ERVL -3958 1696 1423 384 191 0 0 chr2 95683852 95683946 -155003908 + (CA)n Simple_repeat Simple_repeat 1 94 0 260 392 41 0 chr2 95684146 95684243 -155003611 - MIR SINE MIR -70 192 92 227 332 3 0 chr2 95684752 95684834 -155003020 - MIR SINE MIR -61 147 64 460 285 55 42 chr2 95685534 95685699 -155002155 + MIR SINE MIR 87 253 -9 274 277 69 20 chr2 95687292 95687393 -155000461 - L2 LINE L2 -40 3273 3168 941 273 98 28 chr2 95687630 95688019 -154999835 - L2 LINE L2 -706 2608 2193 813 110 0 31 chr2 95688832 95688959 -154998895 + AluSq/x SINE Alu 11 133 -180 308 315 11 0 chr2 95689146 95689235 -154998619 + MER103 DNA DNA 3 92 -74 422 271 54 59 chr2 95689249 95689470 -154998384 + MIR SINE MIR 2 221 -41 237 192 96 27 chr2 95689520 95689593 -154998261 + MIR3 SINE MIR 109 186 -22 288 262 183 32 chr2 95689707 95689833 -154998021 + L2 LINE L2 3169 3313 0 335 209 47 23 chr2 95690122 95690208 -154997646 + MIR SINE MIR 163 250 -12 269 285 23 111 chr2 95690773 95690945 -154996909 - MIR SINE MIR -26 236 80 804 244 2 104 chr2 95691728 95692208 -154995646 - L1MCa LINE L1 -4681 1882 1452 435 273 36 23 chr2 95692215 95692367 -154995487 - L1MCa LINE L1 -5035 1349 1148 445 225 16 0 chr2 95692378 95692507 -154995347 - L1ME LINE L1 -3983 2401 2271 859 301 71 15 chr2 95692555 95692880 -154994974 + MLT2F LTR ERVL 321 663 0 497 319 60 15 chr2 95692911 95693243 -154994611 - L1ME LINE L1 -5394 1169 823 316 341 34 38 chr2 95693522 95693884 -154993970 - L1ME LINE L1 -5945 427 212 483 309 6 12 chr2 95694045 95694207 -154993647 - MIR SINE MIR -15 247 87 206 345 63 21 chr2 95694200 95694342 -154993512 + L2 LINE L2 2507 2654 -660 * 269 208 143 13 chr2 95694669 95694746 -154993108 + MIR SINE MIR 48 134 -128 259 301 27 81 chr2 95694916 95695102 -154992752 - MLT1J LTR MaLR -232 279 104 1973 144 6 13 chr2 95695788 95696100 -154991754 + AluSx SINE Alu 1 310 -2 382 303 129 63 chr2 95696295 95696546 -154991308 - MLT1J LTR MaLR -57 454 162 2041 115 7 7 chr2 95696546 95696866 -154990988 + AluSq SINE Alu 1 313 0 382 303 129 63 chr2 95696866 95697040 -154990814 - MLT1J LTR MaLR -349 162 1 904 309 74 7 chr2 95697041 95697458 -154990396 + MLT1L LTR MaLR 162 606 -9 2416 133 85 10 chr2 95697535 95697933 -154989921 + MSTA LTR MaLR 1 428 0 355 308 48 20 chr2 95698092 95698238 -154989616 - MIR3 SINE MIR -40 168 19 444 338 94 41 chr2 95698317 95698711 -154989143 - L2 LINE L2 -79 3234 2820 * 644 254 161 0 chr2 95698698 95698891 -154988963 + MIR SINE MIR 18 241 -21 642 272 171 22 chr2 95698953 95699310 -154988544 - MLT1K LTR MaLR 0 588 179 487 335 161 5 chr2 95699424 95699803 -154988051 - L2 LINE L2 -552 2762 2325 413 217 92 59 chr2 95701269 95701421 -154986433 - MIR SINE MIR -70 192 36 26 64 0 0 chr2 95702711 95702758 -154985096 + GC_rich Low_complexity Low_complexity 1 47 0 23 86 0 0 chr2 95702931 95702989 -154984865 + GC_rich Low_complexity Low_complexity 1 58 0 200 87 43 22 chr2 95703079 95703125 -154984729 + (CCG)n Simple_repeat Simple_repeat 2 48 0 23 0 0 0 chr2 95703215 95703238 -154984616 + GC_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 95703325 95703360 -154984494 + GC_rich Low_complexity Low_complexity 1 35 0 368 331 72 12 chr2 95705281 95705447 -154982407 + MIR SINE MIR 22 197 -65 275 320 41 18 chr2 95705764 95705917 -154981937 + MIR SINE MIR 32 193 -69 550 257 57 43 chr2 95706748 95706958 -154980896 + L2 LINE L2 3099 3311 -2 403 250 61 54 chr2 95707209 95707357 -154980497 + MER5B DNA MER1_type 1 149 -29 516 276 55 6 chr2 95707508 95707671 -154980183 + MER5A DNA MER1_type 19 189 0 1034 260 156 10 chr2 95707683 95708094 -154979760 - L2 LINE L2 -516 2798 2328 365 272 0 0 chr2 95708096 95708188 -154979666 - MLT1D LTR MaLR -8 497 406 777 157 0 0 chr2 95708200 95708321 -154979533 + FLAM_C SINE Alu 13 133 -10 487 283 137 49 chr2 95708321 95708471 -154979383 - L2 LINE L2 -998 2316 2181 2107 101 31 0 chr2 95708471 95708758 -154979096 + AluSx SINE Alu 1 296 -16 487 283 137 49 chr2 95708758 95708936 -154978918 - L2 LINE L2 -1133 2181 1959 215 184 0 41 chr2 95709041 95709090 -154978764 + CT-rich Low_complexity Low_complexity 1 47 0 210 217 24 60 chr2 95709139 95709222 -154978632 + C-rich Low_complexity Low_complexity 3 82 0 180 333 73 10 chr2 95709720 95709816 -154978038 + L2 LINE L2 383 484 -2830 362 258 58 0 chr2 95709950 95710069 -154977785 + MIR SINE MIR 24 154 -62 815 221 50 0 chr2 95710310 95710509 -154977345 + MER20 DNA MER1_type 5 213 -6 215 267 67 48 chr2 95710513 95710618 -154977236 + MIR3 SINE MIR 53 159 -49 * 257 335 138 27 chr2 95710612 95710836 -154977018 + L2 LINE L2 3017 3265 -7 181 222 0 0 chr2 95711531 95711567 -154976287 - MIR SINE MIR -63 145 110 200 438 0 0 chr2 95711727 95711823 -154976031 + MIR SINE MIR 146 241 -21 7329 55 0 3 chr2 95711838 95713280 -154974574 - L1PA6 LINE L1 -2 6152 4713 341 234 180 18 chr2 95714459 95714626 -154973228 - L2 LINE L2 -1416 1898 1705 1316 176 65 109 chr2 95715028 95715342 -154972512 - MSTD LTR MaLR 0 396 103 666 231 8 0 chr2 95715342 95715472 -154972382 + FLAM_A SINE Alu 1 131 -2 1316 176 65 109 chr2 95715472 95715571 -154972283 - MSTD LTR MaLR -293 103 1 3245 169 194 110 chr2 95715582 95716630 -154971224 - MSTD-int LTR MaLR -2 1733 332 402 155 0 14 chr2 95716630 95716701 -154971153 + Alu SINE Alu 232 301 -10 3245 169 194 110 chr2 95716701 95717063 -154970791 - MSTD-int LTR MaLR -1403 332 2 1349 204 97 32 chr2 95717065 95717437 -154970417 - MSTD LTR MaLR 0 396 1 220 320 13 0 chr2 95717711 95717786 -154970068 + L2 LINE L2 2395 2470 -844 181 263 141 10 chr2 95718253 95718352 -154969502 - L2 LINE L2 -26 3287 3176 1450 204 38 59 chr2 95718361 95718593 -154969261 - MLT1B LTR MaLR 0 390 168 2514 79 3 0 chr2 95718593 95718896 -154968958 - AluSx SINE Alu -8 304 1 1450 204 38 59 chr2 95718896 95719055 -154968799 - MLT1B LTR MaLR -222 168 7 1530 143 0 4 chr2 95719086 95719317 -154968537 - Charlie3 DNA MER1_type -2480 230 1 900 295 131 50 chr2 95719552 95720803 -154967051 - L1M4 LINE L1 -920 5226 3874 314 311 37 22 chr2 95720812 95720947 -154966907 - L1M4 LINE L1 -2336 3810 3674 2071 157 20 80 chr2 95720948 95721348 -154966506 + MSTB LTR MaLR 1 373 -53 1634 140 25 4 chr2 95721348 95721584 -154966270 + AluJb SINE Alu 56 296 -16 2071 157 20 80 chr2 95721584 95721635 -154966219 + MSTB LTR MaLR 373 425 -1 2385 106 0 0 chr2 95721649 95721952 -154965902 - AluSx SINE Alu -9 303 1 325 234 353 0 chr2 95721985 95722169 -154965685 - L2 LINE L2 -1396 1918 1670 2356 227 55 63 chr2 95722340 95722441 -154965413 - L1ME1 LINE L1 -17 6218 6118 197 32 0 32 chr2 95722441 95722472 -154965382 + (TTTAA)n Simple_repeat Simple_repeat 3 32 0 2356 227 55 63 chr2 95722472 95722488 -154965366 - L1ME1 LINE L1 -117 6118 6103 838 163 34 0 chr2 95722488 95722635 -154965219 - FRAM SINE Alu -14 152 1 2356 227 55 63 chr2 95722635 95723483 -154964371 - L1ME1 LINE L1 -132 6103 5261 2137 99 0 46 chr2 95723494 95723797 -154964057 + AluSx SINE Alu 24 312 0 1200 250 6 14 chr2 95723804 95724164 -154963690 - L1ME1 LINE L1 -1438 4777 4421 2658 59 0 0 chr2 95724249 95724552 -154963302 - AluSq SINE Alu -10 303 1 1332 110 5 0 chr2 95724818 95725027 -154962827 + L1PB1 LINE L1 5942 6151 0 294 241 0 0 chr2 95725469 95725548 -154962306 - L1ME1 LINE L1 -1775 4440 4362 * 1487 215 36 3 chr2 95725541 95725899 -154961955 - L1ME1 LINE L1 -2075 4140 3771 453 305 10 10 chr2 95725899 95726102 -154961752 - L1ME1 LINE L1 -2680 3535 3333 1814 160 33 20 chr2 95726105 95726411 -154961443 - AluJo SINE Alu -2 310 1 354 266 90 28 chr2 95726411 95726825 -154961029 - L1ME1 LINE L1 -5165 1040 656 630 244 77 5 chr2 95726989 95727207 -154960647 - L1M LINE L1 -751 5395 5184 2250 104 3 29 chr2 95727250 95727559 -154960295 - AluSx SINE Alu -11 301 1 1284 221 59 24 chr2 95727561 95728277 -154959577 - L1M4 LINE L1 -2991 3155 2368 2384 105 0 9 chr2 95728280 95728595 -154959259 - AluSx SINE Alu 0 312 1 273 298 53 0 chr2 95728599 95728693 -154959161 - L1M4 LINE L1 -3884 2262 2164 243 0 0 0 chr2 95728697 95728724 -154959130 + (TCCA)n Simple_repeat Simple_repeat 1 27 0 1465 242 56 2 chr2 95728957 95729403 -154958451 - L2 LINE L2 -1616 1698 1229 239 286 55 0 chr2 95729482 95729573 -154958281 - L2 LINE L2 -39 3233 3138 344 242 31 78 chr2 95729761 95729889 -154957965 - L1ME4a LINE L1 -2 6119 5998 2547 56 13 0 chr2 95729905 95730208 -154957646 - AluY SINE Alu -4 307 1 184 287 32 43 chr2 95730337 95730431 -154957423 - L2 LINE L2 -181 3091 2999 219 279 0 16 chr2 95730615 95730676 -154957178 - MER91A DNA MER1_type -136 60 1 1700 166 33 23 chr2 95734609 95734916 -154952938 - AluJo SINE Alu 0 312 3 2082 112 0 51 chr2 95734943 95735257 -154952597 + AluSx SINE Alu 1 298 -14 316 345 0 0 chr2 95735257 95735344 -154952510 - L1MC4 LINE L1 -1342 6700 6614 333 253 60 0 chr2 95735348 95735431 -154952423 - L1MC4 LINE L1 -1339 6703 6616 332 47 0 0 chr2 95735632 95735675 -154952179 + FRAM/FAM SINE Alu 37 79 -96 1145 297 76 40 chr2 95735961 95736874 -154950980 - HAL1 LINE L1 -703 1804 860 1269 153 84 45 chr2 95737220 95737507 -154950347 + AluJo SINE Alu 5 302 0 487 316 0 0 chr2 95737720 95737894 -154949960 + (CA)n Simple_repeat Simple_repeat 1 174 0 207 273 26 0 chr2 95738222 95738299 -154949555 + CT-rich Low_complexity Low_complexity 1 79 0 276 100 0 0 chr2 95739602 95739642 -154948212 + (CCCA)n Simple_repeat Simple_repeat 1 40 0 234 289 62 0 chr2 95740269 95740366 -154947488 + MIR SINE MIR 28 130 -78 333 0 0 0 chr2 95740660 95740697 -154947157 + (CA)n Simple_repeat Simple_repeat 2 38 0 246 130 43 0 chr2 95742654 95742700 -154945154 + MER63 DNA MER1_type 3 50 -386 239 285 190 21 chr2 95743084 95743326 -154944528 + L1MEc LINE L1 1346 1628 -4768 2068 117 0 26 chr2 95743329 95743636 -154944218 + AluSq SINE Alu 6 304 -9 481 289 57 13 chr2 95743819 95743978 -154943876 + MLT1G1 LTR MaLR 13 178 -417 * 971 275 71 40 chr2 95743973 95744351 -154943503 - MLT1G1 LTR MaLR -199 396 7 531 265 8 0 chr2 95744517 95744634 -154943220 + MIR SINE MIR 55 172 -90 321 234 3 26 chr2 95745166 95745281 -154942573 + MIR SINE MIR 76 185 -63 680 290 122 39 chr2 95747998 95748457 -154939397 + MLT1K LTR MaLR 17 513 -75 214 351 66 7 chr2 95749140 95749291 -154938563 - L2 LINE L2 -1 3312 3153 247 339 28 0 chr2 95749585 95749694 -154938160 - L2 LINE L2 -584 2730 2619 1700 320 42 8 chr2 95749819 95750443 -154937411 + ERVL LTR ERVL 3186 3830 -1934 1135 231 35 4 chr2 95750467 95750727 -154937127 + ERVL LTR ERVL 4168 4435 -1329 751 206 79 101 chr2 95750750 95751027 -154936827 + ERVL LTR ERVL 4800 5070 -694 699 212 88 108 chr2 95751070 95751200 -154936654 + LTR41 LTR ERVL 477 608 -165 1895 162 3 10 chr2 95751200 95751503 -154936351 - AluJb SINE Alu -11 301 1 699 212 88 108 chr2 95751503 95751669 -154936185 + LTR41 LTR ERVL 608 767 -6 1899 165 13 49 chr2 95751723 95752111 -154935743 + MLT1B LTR MaLR 1 374 -16 244 281 0 0 chr2 95752151 95752208 -154935646 - MLT1F1 LTR MaLR -436 131 75 353 311 137 47 chr2 95752314 95752805 -154935049 - L2 LINE L2 -750 2564 2020 1083 274 82 25 chr2 95752805 95753283 -154934571 - MLT1J LTR MaLR -2 509 5 353 311 137 47 chr2 95753283 95753325 -154934529 - L2 LINE L2 -1294 2020 1983 1135 75 7 14 chr2 95753375 95753543 -154934311 + AluSg/x SINE Alu 136 302 0 431 289 19 56 chr2 95753543 95753813 -154934041 - L2 LINE L2 -1381 1933 1674 1296 231 27 18 chr2 95754228 95754566 -154933288 - MER49 LTR ERV1 0 923 583 960 206 5 11 chr2 95754566 95754750 -154933104 + AluJb SINE Alu 119 301 -11 832 150 28 59 chr2 95754757 95755050 -154932804 - MER49 LTR ERV1 -373 550 183 2515 79 0 0 chr2 95755192 95755496 -154932358 - AluY SINE Alu -7 304 1 3530 182 31 5 chr2 95755497 95756145 -154931709 + Tigger7 DNA MER2_type 3 667 -1820 680 181 0 0 chr2 95756160 95756276 -154931578 + Tigger7 DNA MER2_type 2362 2477 -14 822 246 51 4 chr2 95756276 95756552 -154931302 - L1ME2 LINE L1 -234 5930 5642 2349 174 80 51 chr2 95756562 95757172 -154930682 - MER92B LTR ERV1 -8 628 1 1546 203 11 57 chr2 95757172 95757438 -154930416 - L1ME2 LINE L1 -524 5642 5396 2535 76 0 0 chr2 95757438 95757741 -154930113 - AluY SINE Alu -8 303 1 1546 203 11 57 chr2 95757741 95757935 -154929919 - L1ME2 LINE L1 -770 5396 5195 303 326 235 2 chr2 95758067 95758518 -154929336 + L2 LINE L2 2265 2820 -494 227 272 111 0 chr2 95758743 95758824 -154929030 + MIR SINE MIR 58 147 -61 308 257 128 0 chr2 95758954 95759063 -154928791 + MER96 DNA MER1_type? 1 123 -52 310 301 98 0 chr2 95759721 95759844 -154928010 + MIR SINE MIR 69 203 -59 591 222 56 44 chr2 95760174 95760354 -154927500 + MIR SINE MIR 47 228 -34 2026 136 0 7 chr2 95760785 95761086 -154926768 - AluSx SINE Alu -13 299 1 313 272 136 0 chr2 95761176 95761279 -154926575 - L2 LINE L2 0 3272 3156 183 313 52 52 chr2 95761701 95761816 -154926038 + L2 LINE L2 3155 3269 -3 257 264 124 41 chr2 95762430 95762551 -154925303 - MIR3 SINE MIR -27 181 51 319 249 171 60 chr2 95762908 95763125 -154924729 + L1MC4a LINE L1 5723 5963 -1845 489 249 166 48 chr2 95763823 95764366 -154923488 - L1ME4a LINE L1 -3 6118 5472 246 251 24 162 chr2 95764369 95764708 -154923146 - L1MC4 LINE L1 0 8042 7751 571 214 174 31 chr2 95764862 95764892 -154922962 - MER58A DNA MER1_type -2196 224 200 2276 115 19 25 chr2 95764892 95765258 -154922596 - THE1B LTR MaLR 0 364 1 571 214 174 31 chr2 95765258 95765423 -154922431 - MER58A DNA MER1_type -2220 200 1 1526 285 128 20 chr2 95765438 95765812 -154922042 - L1MC4 LINE L1 -470 7572 7239 1997 137 25 0 chr2 95765812 95766097 -154921757 - AluSx SINE Alu -18 294 3 1526 285 128 20 chr2 95766097 95766459 -154921395 - L1MC4 LINE L1 -803 7239 6757 238 217 51 22 chr2 95766515 95766620 -154921234 - L1ME4a LINE L1 -691 5430 5326 293 128 21 0 chr2 95766622 95766669 -154921185 + MIR SINE MIR 190 237 -25 1725 171 7 17 chr2 95768288 95768581 -154919273 - AluJo SINE Alu -22 290 1 339 261 131 20 chr2 95772328 95772481 -154915373 + MIR SINE MIR 81 250 -12 200 315 16 39 chr2 95772592 95772719 -154915135 + MIR3 SINE MIR 7 130 -78 1086 199 72 86 chr2 95774074 95774435 -154913419 - MLT1A1 LTR MaLR -6 359 4 189 0 0 0 chr2 95774741 95774762 -154913092 + (TG)n Simple_repeat Simple_repeat 2 22 0 1489 232 82 27 chr2 95775283 95775722 -154912132 + MLT1C LTR MaLR 3 465 -2 322 122 0 60 chr2 95776183 95776254 -154911600 - MLT2B1 LTR ERVL 0 515 452 1974 177 108 25 chr2 95776339 95776775 -154911079 - MLT2B1 LTR ERVL -48 472 1 248 319 66 0 chr2 95777351 95777442 -154910412 - MIR3 SINE MIR -2 206 110 387 0 0 0 chr2 95777496 95777539 -154910315 + (TG)n Simple_repeat Simple_repeat 2 44 0 2128 214 34 61 chr2 95778434 95778990 -154908864 - MLT1F LTR MaLR -1 541 1 915 230 6 0 chr2 95779070 95779244 -154908610 - MER5A DNA MER1_type -2 187 13 196 235 0 39 chr2 95779302 95779353 -154908501 + MER5B DNA MER1_type 1 49 -129 2828 62 8 8 chr2 95779496 95779866 -154907988 + L1PB1 LINE L1 5773 6142 -9 530 365 97 17 chr2 95779894 95780357 -154907497 - L3 LINE CR1 -130 1447 948 396 155 0 0 chr2 95780729 95780800 -154907054 + GA-rich Low_complexity Low_complexity 2 72 0 276 267 33 11 chr2 95781470 95781560 -154906294 - L2 LINE L2 -22 3291 3200 437 303 48 32 chr2 95782013 95782201 -154905653 + MIR SINE MIR 21 211 -51 230 390 76 36 chr2 95782773 95782996 -154904858 - L2 LINE L2 0 3272 3041 248 366 9 17 chr2 95783341 95783471 -154904383 + MIR SINE MIR 13 141 -67 289 338 51 45 chr2 95783576 95783733 -154904121 + L2 LINE L2 3102 3259 -13 558 271 114 14 chr2 95784580 95784790 -154903064 - MIR SINE MIR -4 258 28 1588 167 50 25 chr2 95785378 95785494 -154902360 + AluJo SINE Alu 3 115 -197 216 0 0 0 chr2 95785494 95785518 -154902336 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 1588 167 50 25 chr2 95785518 95785682 -154902172 + AluJo SINE Alu 115 290 -22 217 244 0 0 chr2 95786757 95786798 -154901056 + L2 LINE L2 3181 3221 -51 1052 281 25 22 chr2 95786854 95787174 -154900680 - L2 LINE L2 -3 3310 2990 250 340 87 28 chr2 95787466 95787754 -154900100 + L2 LINE L2 2550 2854 -460 261 0 0 0 chr2 95787764 95787793 -154900061 + (CA)n Simple_repeat Simple_repeat 2 30 0 393 350 90 46 chr2 95787800 95788189 -154899665 + L2 LINE L2 2854 3259 -13 206 159 29 87 chr2 95788414 95788483 -154899371 - MIR3 SINE MIR -137 71 7 260 128 128 0 chr2 95788998 95789045 -154898809 - AluSp/q SINE Alu -50 253 201 553 299 107 0 chr2 95789506 95789711 -154898143 - MIR SINE MIR -7 255 30 333 323 189 15 chr2 95790347 95790548 -154897306 + MIR SINE MIR 14 249 -13 912 195 29 15 chr2 95791578 95791783 -154896071 + L1PA16 LINE L1 5833 6040 -126 339 150 50 0 chr2 95794478 95794538 -154893316 + L1PA16 LINE L1 6021 6083 -83 221 0 0 33 chr2 95794688 95794718 -154893136 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1376 178 12 19 chr2 95794720 95794979 -154892875 - AluJb SINE Alu -27 285 29 221 83 28 0 chr2 95794980 95795016 -154892838 + (TA)n Simple_repeat Simple_repeat 2 38 0 335 141 0 78 chr2 95795089 95795153 -154892701 - L1MC4 LINE L1 -1336 6706 6648 1629 192 6 34 chr2 95795664 95796013 -154891841 - MER2 DNA MER2_type 0 345 7 3800 155 87 45 chr2 95846752 95847592 -154840262 + Tigger1 DNA MER2_type 1544 2418 0 1100 251 36 12 chr2 95847592 95848007 -154839847 + L1M3b LINE L1 1330 1754 -4527 3726 139 24 9 chr2 95848298 95848937 -154838917 - Tigger1 DNA MER2_type -1299 1119 472 1312 320 8 8 chr2 95848942 95849323 -154838531 + L1M4c LINE L1 882 1262 -5391 261 191 0 0 chr2 95849428 95849470 -154838384 + Tigger4(Zombi) DNA MER2_type 2690 2731 0 304 173 0 0 chr2 95850058 95850110 -154837744 + L1M1 LINE L1 5728 5779 -526 777 206 22 27 chr2 95850177 95850361 -154837493 + MER58A DNA MER1_type 39 221 -3 1014 159 0 0 chr2 95851281 95851432 -154836422 - AluSq SINE Alu -160 153 3 3320 149 15 11 chr2 95851518 95852043 -154835811 - MER1A DNA MER1_type 0 527 1 270 268 0 0 chr2 95853941 95853997 -154833857 + MER5A DNA MER1_type 24 79 -110 1754 122 10 61 chr2 95854453 95854747 -154833107 + AluSg SINE Alu 1 279 -31 1019 271 44 56 chr2 95854759 95855657 -154832197 + L1M4c LINE L1 1966 2928 -3804 306 167 167 0 chr2 95856672 95856744 -154831110 - MER5A DNA MER1_type -82 107 24 338 143 171 0 chr2 95857885 95857955 -154829899 - MER5A DNA MER1_type -82 107 26 15828 35 6 0 chr2 95859746 95862444 -154825410 + L1PA3 LINE L1 3458 6152 -3 9090 57 1 0 chr2 95863178 95865218 -154822636 + L1PA2 LINE L1 4121 6152 -3 860 202 0 0 chr2 95865219 95865387 -154822467 + L1P LINE L1 1996 2163 -3983 286 147 191 0 chr2 95866382 95866450 -154821404 - MER5A DNA MER1_type -83 106 26 337 191 155 12 chr2 95868257 95868341 -154819513 - MER5A DNA MER1_type -83 106 11 313 212 153 0 chr2 95869471 95869556 -154818298 - MER5A DNA MER1_type -83 106 9 240 121 379 0 chr2 95871331 95871389 -154816465 - MER5A DNA MER1_type -83 106 27 6509 250 45 16 chr2 95872716 95874330 -154813524 - L1 LINE L1 -1007 5139 3364 2096 139 0 7 chr2 95874330 95874632 -154813222 + AluSq SINE Alu 1 300 -13 6509 250 45 16 chr2 95874632 95875855 -154811999 - L1 LINE L1 -2782 3364 2177 348 335 59 0 chr2 95876615 95876785 -154811069 + L2 LINE L2 2726 2905 -409 27 62 0 0 chr2 95879478 95879526 -154808328 + AT_rich Low_complexity Low_complexity 1 48 0 3281 142 28 8 chr2 95879880 95880484 -154807370 + MER4E LTR ERV1 1 616 -150 1763 78 4 0 chr2 95880669 95880913 -154806941 + MER4E LTR ERV1 517 761 -5 2043 120 7 3 chr2 95881676 95881968 -154805886 - AluSg SINE Alu -17 293 1 21 0 0 0 chr2 95881969 95881990 -154805864 + AT_rich Low_complexity Low_complexity 1 21 0 346 273 116 38 chr2 95882011 95882304 -154805550 + L1ME4a LINE L1 5523 5838 -283 218 352 78 78 chr2 95882792 95883127 -154804727 - L2 LINE L2 0 3272 2938 954 295 55 55 chr2 95883148 95883752 -154804102 + L1MEc LINE L1 40 643 -5753 1221 222 40 35 chr2 95884109 95885257 -154802597 + L1MEc LINE L1 1953 3152 -3063 785 247 70 3 chr2 95885361 95885661 -154802193 + L1MEc LINE L1 3494 3813 -2402 * 2374 192 52 16 chr2 95885659 95886236 -154801618 + L1MC1 LINE L1 5727 6324 -9 1353 259 36 17 chr2 95886243 95886711 -154801143 + L1MEc LINE L1 3800 4276 -1939 575 224 19 0 chr2 95886757 95886905 -154800949 + MER58B DNA MER1_type 37 308 -33 461 264 31 0 chr2 95886951 95887114 -154800740 + L1MEc LINE L1 4295 4462 -1753 1024 219 93 21 chr2 95887180 95887568 -154800286 + L1MEc LINE L1 4435 4850 -1365 1701 146 100 6 chr2 95887568 95887898 -154799956 - MER46B DNA MER2_type 0 236 1 234 188 146 0 chr2 95887916 95887964 -154799890 + Tigger5 DNA MER2_type 1 55 -2268 1715 232 36 20 chr2 95888031 95888812 -154799042 + L1MEc LINE L1 4866 5660 -745 381 127 169 0 chr2 95890473 95890544 -154797310 - MER5A DNA MER1_type -83 106 24 301 194 167 0 chr2 95892345 95892417 -154795437 - MER5A DNA MER1_type -82 107 24 309 183 169 0 chr2 95894221 95894292 -154793562 - MER5A DNA MER1_type -83 106 24 393 230 30 0 chr2 95894548 95894648 -154793206 + L1PA12 LINE L1 799 901 -6680 1155 237 102 29 chr2 95894663 95895456 -154792398 + L1PA12 LINE L1 791 1627 -5954 1792 193 82 47 chr2 95895459 95895834 -154792020 - L1PA12 LINE L1 -6415 1166 765 2155 138 0 0 chr2 95895834 95896146 -154791708 + AluSx SINE Alu 1 312 0 1792 193 82 47 chr2 95896146 95896308 -154791546 - L1PA12 LINE L1 -6816 765 610 443 210 73 0 chr2 95896564 95896688 -154791166 + L1MC/D LINE L1 4472 4604 -1542 1580 256 50 2 chr2 95896695 95897290 -154790564 + L1MC/D LINE L1 4648 5271 -875 1301 146 41 12 chr2 95897305 95897551 -154790303 + L1MC/D LINE L1 5322 5574 -759 656 209 155 5 chr2 95897564 95897751 -154790103 - MSTB-int LTR MaLR -1434 217 3 1880 213 22 7 chr2 95897804 95898212 -154789642 - MSTB LTR MaLR -12 414 1 2467 219 90 11 chr2 95898213 95898978 -154788876 - L1M4c LINE L1 -4516 1787 974 23 33 0 0 chr2 95901151 95901181 -154786673 + AT_rich Low_complexity Low_complexity 1 30 0 24448 53 0 2 chr2 95901538 95904733 -154783121 + L1P LINE L1 9 3196 -2950 267 232 8 88 chr2 95904987 95905112 -154782742 + Alu SINE Alu 179 293 -8 2202 119 3 0 chr2 95906140 95906435 -154781419 + AluSg SINE Alu 1 296 -14 4422 177 25 2 chr2 95906917 95907837 -154780017 + L1MA3 LINE L1 5365 6305 0 2062 125 3 0 chr2 95908134 95908422 -154779432 + AluSp SINE Alu 1 289 -24 254 0 83 0 chr2 95908425 95908461 -154779393 + A-rich Low_complexity Low_complexity 2 40 0 21 0 0 0 chr2 95908795 95908816 -154779038 + AT_rich Low_complexity Low_complexity 1 21 0 312 157 171 0 chr2 95910370 95910440 -154777414 + MER5A DNA MER1_type 26 107 -82 333 186 0 0 chr2 95912239 95912298 -154775556 + MER5A DNA MER1_type 23 81 -108 2293 90 0 7 chr2 95912946 95913245 -154774609 + AluSq SINE Alu 1 297 -16 1276 99 0 6 chr2 95913248 95913419 -154774435 + AluSg/x SINE Alu 127 296 -16 198 0 0 0 chr2 95913464 95913486 -154774368 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 324 0 0 0 chr2 95913485 95913521 -154774333 + (CA)n Simple_repeat Simple_repeat 1 36 0 331 225 14 0 chr2 95914432 95914503 -154773351 + MIR SINE MIR 74 145 -117 283 277 21 28 chr2 95915033 95915174 -154772680 + CT-rich Low_complexity Low_complexity 3 142 0 427 302 139 5 chr2 95915500 95915715 -154772139 - MIR SINE MIR -11 251 8 647 205 0 17 chr2 95915739 95915979 -154771875 + CT-rich Low_complexity Low_complexity 1 236 0 702 262 53 13 chr2 95915986 95916211 -154771643 - MIR SINE MIR -25 237 4 215 270 98 25 chr2 95917429 95917592 -154770262 + MIR3 SINE MIR 9 183 -25 2532 211 58 8 chr2 95917824 95918431 -154769423 - L1ME3 LINE L1 -94 6068 5432 2515 190 80 13 chr2 95918476 95918972 -154768882 - L1MB3 LINE L1 0 6183 5722 2111 129 0 10 chr2 95918972 95919283 -154768571 + AluSx SINE Alu 1 308 -4 2515 190 80 13 chr2 95919283 95919644 -154768210 - L1MB3 LINE L1 -461 5722 5242 1843 130 4 0 chr2 95919645 95919906 -154767948 - AluJb SINE Alu -15 297 36 4322 180 34 19 chr2 95919916 95920438 -154767416 - L1MB5 LINE L1 -1 6173 5660 2263 105 3 7 chr2 95920438 95920742 -154767112 - AluSq SINE Alu -10 303 1 4322 180 34 19 chr2 95920742 95921587 -154766267 - L1MB5 LINE L1 -514 5660 4787 367 211 110 18 chr2 95921587 95921696 -154766158 + L2 LINE L2 2943 3061 -252 193 220 150 70 chr2 95921987 95922087 -154765767 + L2 LINE L2 3179 3286 -27 269 299 47 31 chr2 95922199 95922326 -154765528 - L2 LINE L2 -837 2477 2349 428 254 65 18 chr2 95922457 95922626 -154765228 - MIR SINE MIR -78 184 8 212 356 81 12 chr2 95923244 95923404 -154764450 + MIR SINE MIR 49 219 -43 677 243 236 12 chr2 95924631 95924965 -154762889 + MLT1J2 LTR MaLR 36 444 -6 201 286 286 0 chr2 95925012 95925110 -154762744 + MIR SINE MIR 121 246 -16 269 376 12 6 chr2 95926922 95927084 -154760770 - L1MC/D LINE L1 -2035 5773 5611 250 280 103 0 chr2 95927109 95927216 -154760638 - MIR SINE MIR -73 135 18 4401 188 25 37 chr2 95927270 95927977 -154759877 - L1MB7 LINE L1 0 6184 5470 865 165 0 0 chr2 95927977 95928110 -154759744 - FLAM_A SINE Alu 0 133 1 4401 188 25 37 chr2 95928110 95929253 -154758601 - L1MB7 LINE L1 -714 5470 4358 211 135 27 0 chr2 95929473 95929510 -154758344 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 241 310 26 26 chr2 95932589 95932702 -154755152 + MIR3 SINE MIR 3 115 -93 2955 148 37 42 chr2 95933557 95934085 -154753769 + L1MCa LINE L1 1745 2269 -4157 1769 224 34 0 chr2 95934085 95934438 -154753416 - MLT1A1 LTR MaLR 0 365 1 2955 148 37 42 chr2 95934438 95934638 -154753216 + L1MCa LINE L1 2269 2469 -3957 * 5076 115 41 53 chr2 95934616 95934805 -154753049 + L1PA15 LINE L1 5427 5617 -828 318 43 0 43 chr2 95934805 95934852 -154753002 - U2 snRNA snRNA -143 45 1 5076 115 41 53 chr2 95934852 95935649 -154752205 + L1PA15 LINE L1 5617 6443 -2 * 7215 238 36 29 chr2 95935647 95936948 -154750906 + L1MCa LINE L1 2452 3741 -2685 1874 155 20 0 chr2 95936948 95937244 -154750610 + AluJb SINE Alu 11 312 0 7215 238 36 29 chr2 95937244 95938058 -154749796 + L1MCa LINE L1 3741 4547 -1879 2136 142 0 3 chr2 95938058 95938361 -154749493 + AluSx SINE Alu 1 302 -10 7215 238 36 29 chr2 95938361 95938971 -154748883 + L1MCa LINE L1 4547 5367 -1059 1969 162 3 0 chr2 95938972 95939274 -154748580 - AluSx SINE Alu -1 311 9 3073 148 13 9 chr2 95939341 95939868 -154747986 + L1MC1 LINE L1 5805 6333 0 1724 293 65 23 chr2 95939899 95940071 -154747783 + L1MEc LINE L1 1020 1183 -5213 744 199 204 5 chr2 95940071 95940257 -154747597 + MER58A DNA MER1_type 2 224 0 1724 293 65 23 chr2 95940257 95941012 -154746842 + L1MEc LINE L1 1183 1986 -4410 373 252 36 0 chr2 95941016 95941127 -154746727 + L1ME2 LINE L1 6050 6164 0 268 313 113 19 chr2 95941883 95942043 -154745811 + MIR3 SINE MIR 20 194 -14 249 302 118 24 chr2 95942864 95943033 -154744821 + MIR SINE MIR 60 244 -18 232 271 178 9 chr2 95945310 95945417 -154742437 - HAL1 LINE L1 -770 1737 1613 1267 140 11 0 chr2 95945603 95945789 -154742065 + AluSq SINE Alu 106 293 -20 366 281 74 98 chr2 95948098 95948465 -154739389 - L2 LINE L2 -1 3271 2914 329 116 74 0 chr2 95948594 95948654 -154739200 + MSTB LTR MaLR 1 63 -301 262 305 106 40 chr2 95949001 95949152 -154738702 - MIR SINE MIR -37 225 65 196 354 49 0 chr2 95949596 95949678 -154738176 + MER5A DNA MER1_type 54 139 -50 182 356 33 0 chr2 95949611 95949701 -154738153 - MER5A DNA MER1_type -59 130 38 * 363 232 30 20 chr2 95949715 95949814 -154738040 - MIR SINE MIR -84 124 25 247 356 26 9 chr2 95950185 95950300 -154737554 + MIR3 SINE MIR 8 124 -84 385 276 49 32 chr2 95950410 95950533 -154737321 - L2 LINE L2 -2 3311 3187 1160 168 5 0 chr2 95950574 95951168 -154736686 + (TGGA)n Simple_repeat Simple_repeat 1 597 0 842 184 6 0 chr2 95951180 95951359 -154736495 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 282 204 31 82 chr2 95953088 95953186 -154734668 + MIR SINE MIR 47 139 -123 224 289 19 58 chr2 95953268 95953372 -154734482 - MIR SINE MIR -50 212 113 238 358 33 8 chr2 95954462 95954582 -154733272 + L2 LINE L2 3191 3313 0 347 153 167 0 chr2 95956416 95956488 -154731366 - MER5A DNA MER1_type -82 107 24 345 161 0 0 chr2 95958852 95958908 -154728946 - MER5A DNA MER1_type -110 79 24 24 0 0 0 chr2 95960512 95960536 -154727318 + AT_rich Low_complexity Low_complexity 1 24 0 342 197 169 0 chr2 95960737 95960808 -154727046 - MER5A DNA MER1_type -83 106 24 261 236 167 14 chr2 95962610 95962682 -154725172 - MER5A DNA MER1_type -83 106 24 382 127 169 0 chr2 95964477 95964548 -154723306 - MER5A DNA MER1_type -83 106 24 305 196 0 0 chr2 95965455 95965511 -154722343 - MER5A DNA MER1_type -110 79 24 224 59 29 0 chr2 95967319 95967353 -154720501 + (TTG)n Simple_repeat Simple_repeat 2 36 0 195 100 0 0 chr2 95968961 95968991 -154718863 + (TA)n Simple_repeat Simple_repeat 2 31 0 230 56 28 0 chr2 95970178 95970214 -154717640 + (CA)n Simple_repeat Simple_repeat 2 38 0 2161 98 0 19 chr2 95970708 95971015 -154716839 + AluY SINE Alu 1 301 -10 195 300 100 25 chr2 95971855 95971935 -154715919 - L2 LINE L2 -48 3224 3139 334 235 165 0 chr2 95973712 95973797 -154714057 - MER5A DNA MER1_type -67 122 24 291 181 167 0 chr2 95975521 95975593 -154712261 - MER5A DNA MER1_type -82 107 24 301 167 167 0 chr2 95977391 95977463 -154710391 - MER5A DNA MER1_type -82 107 24 313 211 169 0 chr2 95978656 95978727 -154709127 - MER5A DNA MER1_type -83 106 24 325 181 167 0 chr2 95980525 95980597 -154707257 - MER5A DNA MER1_type -83 106 23 347 155 169 0 chr2 95981966 95982037 -154705817 - MER5A DNA MER1_type -83 106 24 359 155 169 0 chr2 95983827 95983898 -154703956 - MER5A DNA MER1_type -83 106 24 545 279 32 26 chr2 95985959 95986149 -154701705 + MIR SINE MIR 72 262 0 347 311 6 30 chr2 95986277 95986441 -154701413 + MER104 DNA Tc2 18 177 -3 21 0 0 0 chr2 95987070 95987091 -154700763 + AT_rich Low_complexity Low_complexity 1 21 0 209 203 0 17 chr2 95987215 95987246 -154700608 + A-rich Low_complexity Low_complexity 3 34 -26 2059 113 10 3 chr2 95987246 95987547 -154700307 + AluSx SINE Alu 1 303 -9 209 203 0 17 chr2 95987547 95987574 -154700280 + A-rich Low_complexity Low_complexity 34 60 0 27 29 0 0 chr2 95987896 95987930 -154699924 + AT_rich Low_complexity Low_complexity 1 34 0 347 155 169 0 chr2 95989058 95989129 -154698725 - MER5A DNA MER1_type -83 106 24 291 197 169 0 chr2 95990924 95990995 -154696859 - MER5A DNA MER1_type -83 106 24 256 189 19 0 chr2 95992808 95992861 -154694993 - MER5A DNA MER1_type -110 79 26 309 225 14 0 chr2 95994690 95994761 -154693093 - MER5A DNA MER1_type -109 80 9 288 235 153 0 chr2 95995986 95996071 -154691783 + MER5A DNA MER1_type 9 106 -83 304 174 174 0 chr2 95997878 95997947 -154689907 + MER5A DNA MER1_type 26 106 -83 1376 180 8 0 chr2 95999647 95999886 -154687968 - AluSx SINE Alu -71 241 1 489 234 0 78 chr2 95999895 96000036 -154687818 - FLAM_A SINE Alu 0 133 4 424 357 22 22 chr2 96000188 96000415 -154687439 - MIR SINE MIR 0 262 36 271 299 72 10 chr2 96001042 96001139 -154686715 - L3 LINE CR1 -8 1569 1467 224 383 125 0 chr2 96001136 96001256 -154686598 - MIR3 SINE MIR -72 136 2 * 472 325 0 0 chr2 96003551 96003668 -154684186 + FLAM_A SINE Alu 2 118 -15 4921 19 46 0 chr2 96003916 96004502 -154683352 + L1PA2 LINE L1 5542 6154 -1 203 374 130 0 chr2 96004861 96004976 -154682878 - L2 LINE L2 -1 3312 3183 487 294 0 24 chr2 96005283 96005409 -154682445 - FLAM_A SINE Alu -9 124 2 200 400 125 0 chr2 96007086 96007206 -154680648 + MIR3 SINE MIR 2 136 -72 * 221 323 83 10 chr2 96007203 96007299 -154680555 + L3 LINE CR1 1467 1569 -8 469 360 18 18 chr2 96007921 96008149 -154679705 + MIR SINE MIR 29 256 -6 665 198 0 25 chr2 96008309 96008430 -154679424 + FLAM_A SINE Alu 6 123 -19 1977 148 0 10 chr2 96008449 96008760 -154679094 + AluSx SINE Alu 1 308 -4 203 361 0 16 chr2 96008954 96009015 -154678839 + MIR SINE MIR 20 79 -183 510 308 0 0 chr2 96010707 96010824 -154677030 - FLAM_A SINE Alu -15 118 2 224 383 125 0 chr2 96013123 96013243 -154674611 + MIR3 SINE MIR 2 136 -72 * 267 287 75 11 chr2 96013240 96013334 -154674520 + L3 LINE CR1 1467 1566 -11 420 370 18 18 chr2 96013965 96014192 -154673662 + MIR SINE MIR 36 262 0 492 213 7 85 chr2 96014344 96014485 -154673369 + FLAM_A SINE Alu 4 133 0 1494 155 8 0 chr2 96014492 96014731 -154673123 + AluSx SINE Alu 1 241 -71 300 179 179 0 chr2 96015884 96015951 -154671903 + MER5A DNA MER1_type 28 106 -83 277 194 179 0 chr2 96017766 96017833 -154670021 + MER5A DNA MER1_type 28 106 -83 336 212 153 0 chr2 96019629 96019714 -154668140 + MER5A DNA MER1_type 9 106 -83 654 47 0 0 chr2 96021385 96021471 -154666383 + (TA)n Simple_repeat Simple_repeat 2 87 0 264 77 0 0 chr2 96022670 96022709 -154665145 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr2 96023407 96023428 -154664426 + AT_rich Low_complexity Low_complexity 1 21 0 6671 107 18 1 chr2 96023604 96024662 -154663192 - L1P3 LINE L1 -973 5173 4098 2802 80 23 0 chr2 96024642 96025104 -154662750 + L1P3 LINE L1 5182 5651 -503 * 650 189 8 25 chr2 96025133 96025255 -154662599 + FLAM_A SINE Alu 6 125 -17 2008 140 3 17 chr2 96025262 96025562 -154662292 + AluSx SINE Alu 1 296 -16 3085 173 115 77 chr2 96025989 96026817 -154661037 - MER21B LTR ERV1 -4 859 1 2820 227 39 8 chr2 96026820 96027485 -154660369 + MER44D DNA MER2_type 20 705 0 22 0 0 0 chr2 96027935 96027957 -154659897 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr2 96028021 96028041 -154659813 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1444 219 68 10 chr2 96028547 96028958 -154658896 + L1MC1 LINE L1 5893 6327 -6 30 45 0 0 chr2 96029210 96029254 -154658600 + AT_rich Low_complexity Low_complexity 1 44 0 2342 223 35 14 chr2 96029530 96030081 -154657773 + MER68 LTR ERV1 1 562 0 813 234 25 0 chr2 96030420 96030578 -154657276 + FAM SINE Alu 1 162 -13 2206 100 0 3 chr2 96030588 96030879 -154656975 + AluSc SINE Alu 1 290 -19 1570 201 0 30 chr2 96031222 96031520 -154656334 + AluJo SINE Alu 7 295 -17 3528 34 23 0 chr2 96032115 96032551 -154655303 - L1PA4 LINE L1 0 6155 5710 6727 45 6 0 chr2 96032551 96033441 -154654413 + L1P LINE L1 4461 5355 -791 5671 24 1 2 chr2 96033541 96034569 -154653285 + L1P2 LINE L1 4671 5698 -457 283 308 139 59 chr2 96034960 96035333 -154652521 + L2 LINE L2 1858 2260 -1054 193 361 21 10 chr2 96035425 96035522 -154652332 + L2 LINE L2 2430 2527 -787 24 32 0 0 chr2 96035636 96035667 -154652187 + AT_rich Low_complexity Low_complexity 1 31 0 375 169 8 30 chr2 96035838 96035965 -154651889 + Tigger2 DNA MER2_type 2503 2718 0 22 0 0 0 chr2 96036138 96036160 -154651694 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 96036429 96036459 -154651395 + AT_rich Low_complexity Low_complexity 1 30 0 402 119 0 0 chr2 96037537 96037596 -154650258 - U6 snRNA snRNA -48 59 1 267 74 108 14 chr2 96039570 96039718 -154648136 + (TA)n Simple_repeat Simple_repeat 2 163 0 437 254 84 52 chr2 96039814 96040027 -154647827 - MIR SINE MIR -25 237 18 201 313 100 25 chr2 96040893 96040973 -154646881 + L2 LINE L2 3139 3224 -48 31 0 0 0 chr2 96041818 96041849 -154646005 + AT_rich Low_complexity Low_complexity 1 31 0 302 81 91 40 chr2 96041871 96041970 -154645884 - AluSc SINE Alu -32 267 164 1889 119 3 21 chr2 96042387 96042672 -154645182 - AluY SINE Alu -31 280 1 372 286 98 9 chr2 96042964 96043188 -154644666 - MER102b DNA MER1_type 0 341 98 24 32 0 0 chr2 96043499 96043530 -154644324 + AT_rich Low_complexity Low_complexity 1 31 0 502 284 32 26 chr2 96046158 96046348 -154641506 + MIR SINE MIR 72 262 0 1683 16 0 0 chr2 96046360 96046548 -154641306 - AluYb8 SINE Alu -3 315 128 21 0 0 0 chr2 96047463 96047484 -154640370 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 31 chr2 96047623 96047639 -154640215 + AT_rich Low_complexity Low_complexity 1 16 -15 2144 126 7 3 chr2 96047639 96047949 -154639905 + AluSx SINE Alu 1 311 -1 21 0 0 31 chr2 96047949 96047964 -154639890 + AT_rich Low_complexity Low_complexity 16 31 0 27 29 0 0 chr2 96048290 96048324 -154639530 + AT_rich Low_complexity Low_complexity 1 34 0 256 293 30 8 chr2 96048395 96048528 -154639326 - L1ME LINE L1 -460 5661 5526 554 84 0 36 chr2 96049060 96049143 -154638711 + MADE1 DNA Mariner 1 80 0 388 205 0 97 chr2 96049867 96050136 -154637718 + C-rich Low_complexity Low_complexity 1 242 0 379 267 151 103 chr2 96050651 96051457 -154636397 + L1M2 LINE L1 562 1406 -5443 * 402 254 130 115 chr2 96050966 96051595 -154636259 - L1M2 LINE L1 -5473 1376 600 280 182 0 0 chr2 96051602 96051646 -154636208 + MIR3 SINE MIR 142 185 -23 2071 110 7 3 chr2 96052565 96052864 -154634990 - AluSg SINE Alu -10 300 1 294 291 61 27 chr2 96052900 96053048 -154634806 - L3 LINE CR1 -125 1452 1300 180 333 205 26 chr2 96053127 96053439 -154634415 - L2 LINE L2 0 3272 2905 365 271 62 68 chr2 96053453 96053630 -154634224 + L2 LINE L2 3096 3271 -1 1296 154 43 122 chr2 96053977 96054372 -154633482 + MLT1A1 LTR MaLR 1 364 -1 2483 199 20 65 chr2 96055371 96056014 -154631840 - MER90 LTR ERV1 0 614 1 330 299 17 19 chr2 96056157 96056429 -154631425 + L1M LINE L1 5158 5427 -745 697 291 10 10 chr2 96056431 96056740 -154631114 - L1MCa LINE L1 -3666 2760 2452 240 200 0 0 chr2 96056738 96056793 -154631061 - L1PA16 LINE L1 0 6166 6112 * 9302 48 11 0 chr2 96056807 96058739 -154629115 - L1PA5 LINE L1 -9 6145 4203 10289 86 8 22 chr2 96058818 96059789 -154628065 - L1PA5 LINE L1 -3993 2153 1169 267 54 0 0 chr2 96059789 96059826 -154628028 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 2073 98 0 0 chr2 96059835 96060100 -154627754 - AluY SINE Alu -44 267 3 10289 86 8 22 chr2 96060100 96060689 -154627165 - L1PA5 LINE L1 -4985 1161 606 4784 125 68 8 chr2 96060691 96061617 -154626237 - L1PA15 LINE L1 -37 6128 5153 4159 132 108 69 chr2 96061598 96061813 -154626041 - L1MCa LINE L1 -3954 2472 2267 * 1433 232 86 0 chr2 96061813 96062149 -154625705 + MLT1A1 LTR MaLR 1 365 0 4159 132 108 69 chr2 96062149 96062875 -154624979 - L1MCa LINE L1 -4159 2267 1571 186 71 0 0 chr2 96062875 96062903 -154624951 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1489 144 8 33 chr2 96062905 96063148 -154624706 - AluSx SINE Alu -33 279 43 4159 132 108 69 chr2 96063148 96063320 -154624534 - L1MCa LINE L1 -4855 1571 1311 180 0 0 0 chr2 96063321 96063341 -154624513 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1864 127 42 14 chr2 96063341 96063625 -154624229 - 7SLRNA srpRNA srpRNA -21 299 8 1135 186 15 5 chr2 96063630 96063834 -154624020 - AluJb SINE Alu -20 292 87 3460 159 28 17 chr2 96063834 96064539 -154623315 - L1MCa LINE L1 -5110 1316 604 298 266 44 0 chr2 96064706 96064819 -154623035 + L1MC4 LINE L1 7924 8041 -1 855 275 102 10 chr2 96065150 96065445 -154622409 - MLT1I LTR MaLR -2 407 86 221 324 20 10 chr2 96065872 96065974 -154621880 + L3 LINE CR1 1428 1530 -47 1499 148 0 0 chr2 96066080 96066324 -154621530 + Tigger7 DNA MER2_type 425 668 -1819 549 219 0 0 chr2 96066338 96066452 -154621402 + Tigger7 DNA MER2_type 2358 2471 -16 2372 220 23 14 chr2 96066457 96066734 -154621120 - L1ME1 LINE L1 -242 5924 5651 2241 214 70 13 chr2 96066734 96067336 -154620518 - MER92B LTR ERV1 0 636 1 2372 220 23 14 chr2 96067336 96067780 -154620074 - L1ME1 LINE L1 -515 5651 5195 199 307 230 19 chr2 96067844 96067869 -154619985 + L2 LINE L2 2183 2201 -1113 2261 72 41 0 chr2 96067869 96068161 -154619693 - AluY SINE Alu -7 304 1 199 307 230 19 chr2 96068161 96068662 -154619192 + L2 LINE L2 2201 2820 -494 201 300 82 27 chr2 96068857 96068967 -154618887 + MIR SINE MIR 31 146 -62 334 216 23 0 chr2 96069098 96069186 -154618668 + MER96 DNA MER1_type? 1 90 -85 23 0 0 0 chr2 96069249 96069272 -154618582 + GC_rich Low_complexity Low_complexity 1 23 0 285 242 68 0 chr2 96069832 96069954 -154617900 + MIR SINE MIR 58 191 -61 468 196 63 101 chr2 96070290 96070438 -154617416 + MIR SINE MIR 47 188 -74 2391 77 3 0 chr2 96070438 96070736 -154617118 + AluY SINE Alu 1 299 -12 468 196 63 101 chr2 96070736 96070776 -154617078 + MIR SINE MIR 188 228 -34 1901 123 27 10 chr2 96071214 96071514 -154616340 - AluSq SINE Alu -8 305 1 297 224 176 0 chr2 96071629 96071714 -154616140 - L2 LINE L2 0 3272 3173 239 264 124 41 chr2 96072885 96073006 -154614848 - MIR3 SINE MIR -27 181 51 294 244 180 69 chr2 96073363 96073580 -154614274 + L1MC4a LINE L1 5723 5963 -1845 442 272 146 67 chr2 96074431 96074670 -154613184 - L1ME4a LINE L1 -207 5914 5629 2376 103 0 0 chr2 96074670 96074972 -154612882 - AluSc SINE Alu -7 302 1 442 272 146 67 chr2 96074972 96075137 -154612717 - L1ME4a LINE L1 -492 5629 5478 322 261 156 67 chr2 96075146 96075549 -154612305 - L1MC4 LINE L1 0 8042 7604 620 228 162 25 chr2 96075549 96075577 -154612277 - MER58A DNA MER1_type -2196 224 201 2333 123 19 22 chr2 96075577 96075942 -154611912 - THE1B LTR MaLR 0 364 1 620 228 162 25 chr2 96075942 96076110 -154611744 - MER58A DNA MER1_type -2219 201 1 1254 259 205 27 chr2 96076125 96076471 -154611383 - L1MC4 LINE L1 -470 7572 7289 2025 120 21 3 chr2 96076471 96076762 -154611092 - AluSx SINE Alu -16 296 1 1254 259 205 27 chr2 96076762 96076827 -154611027 - L1MC4 LINE L1 -753 7289 7237 2531 60 0 0 chr2 96076827 96077125 -154610729 + AluY SINE Alu 1 298 -13 1254 259 205 27 chr2 96077125 96077406 -154610448 - L1MC4 LINE L1 -805 7237 6756 260 182 62 25 chr2 96077461 96077566 -154610288 - L1ME4a LINE L1 -691 5430 5326 270 157 20 0 chr2 96077584 96077635 -154610219 + MIR SINE MIR 186 237 -25 1733 165 16 16 chr2 96079241 96079550 -154608304 - AluJo SINE Alu -3 309 1 309 264 70 42 chr2 96086949 96087095 -154600759 - MIR SINE MIR -62 146 2 1363 183 56 32 chr2 96087342 96087626 -154600228 - AluJb SINE Alu -10 292 2 185 286 114 0 chr2 96087835 96087905 -154599949 - L2 LINE L2 -2102 1212 1135 675 284 224 21 chr2 96088170 96088822 -154599032 + L2 LINE L2 2187 2970 -344 3959 14 0 2 chr2 96089387 96089832 -154598022 - L1P1 LINE L1 -376 5779 5336 180 0 0 0 chr2 96089922 96089942 -154597912 + (TC)n Simple_repeat Simple_repeat 2 21 0 198 333 0 17 chr2 96090755 96090815 -154597039 - MIR SINE MIR -184 78 20 2060 138 3 10 chr2 96091004 96091316 -154596538 - AluSx SINE Alu 0 312 3 485 260 83 0 chr2 96092040 96092232 -154595622 + L1MA4 LINE L1 6089 6296 -4 210 113 32 16 chr2 96092500 96092562 -154595292 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 2505 41 3 7 chr2 96092581 96092874 -154594980 - AluY SINE Alu -19 292 1 2838 42 7 8 chr2 96094232 96094595 -154593259 + L1P2 LINE L1 5375 5748 -422 374 169 29 28 chr2 96095832 96095959 -154591895 + Tigger2 DNA MER2_type 2502 2708 -10 22 0 0 0 chr2 96096134 96096156 -154591698 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 96096425 96096455 -154591399 + AT_rich Low_complexity Low_complexity 1 30 0 445 102 0 0 chr2 96097530 96097589 -154590265 - U6 snRNA snRNA -48 59 1 327 155 169 0 chr2 96099653 96099724 -154588130 - MER5A DNA MER1_type -83 106 24 261 196 0 0 chr2 96101531 96101587 -154586267 - MER5A DNA MER1_type -109 80 25 310 139 167 0 chr2 96103389 96103461 -154584393 - MER5A DNA MER1_type -82 107 24 327 155 169 0 chr2 96105260 96105331 -154582523 - MER5A DNA MER1_type -83 106 24 1740 242 21 6 chr2 96105782 96106405 -154581449 - L1PA3 LINE L1 -188 5967 5336 189 0 0 0 chr2 96106478 96106499 -154581355 + (T)n Simple_repeat Simple_repeat 1 21 0 198 333 0 17 chr2 96107334 96107394 -154580460 - MIR SINE MIR -184 78 20 2084 131 3 10 chr2 96107586 96107898 -154579956 - AluSx SINE Alu 0 312 3 513 250 83 0 chr2 96108622 96108814 -154579040 + L1MA4 LINE L1 6089 6296 -4 236 123 46 15 chr2 96109082 96109147 -154578707 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 2532 41 3 7 chr2 96109159 96109454 -154578400 - AluY SINE Alu -17 294 1 22 35 0 0 chr2 96111613 96111642 -154576212 + AT_rich Low_complexity Low_complexity 1 29 0 193 78 0 78 chr2 96111645 96111696 -154576158 + (TTAAA)n Simple_repeat Simple_repeat 2 48 0 57 16 0 0 chr2 96111702 96111766 -154576088 + AT_rich Low_complexity Low_complexity 1 64 0 2210 86 0 20 chr2 96112334 96112637 -154575217 + AluSc SINE Alu 1 297 -12 2151 69 18 0 chr2 96112926 96113227 -154574627 - AluY SINE Alu 0 306 1 292 235 61 20 chr2 96114882 96114980 -154572874 - Charlie1 DNA MER1_type -2557 204 103 198 0 0 0 chr2 96116274 96116296 -154571558 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 441 48 16 0 chr2 96116296 96116359 -154571495 - L1PA3 LINE L1 -6 6149 6086 240 200 0 0 chr2 96117666 96117716 -154570138 + (TG)n Simple_repeat Simple_repeat 1 50 0 6598 83 52 5 chr2 96117895 96118848 -154569006 - L1PA7 LINE L1 -12 6142 5182 7101 99 13 8 chr2 96118849 96119890 -154567964 + L1PA7 LINE L1 4123 5169 -977 276 77 0 0 chr2 96120772 96120811 -154567043 + (TG)n Simple_repeat Simple_repeat 2 40 0 22 35 0 0 chr2 96122197 96122226 -154565628 + AT_rich Low_complexity Low_complexity 1 29 0 312 159 174 0 chr2 96123676 96123745 -154564109 - MER5A DNA MER1_type -83 106 26 243 121 379 0 chr2 96125536 96125594 -154562260 - MER5A DNA MER1_type -83 106 27 21 36 0 0 chr2 96127146 96127174 -154560680 + AT_rich Low_complexity Low_complexity 1 28 0 370 129 171 0 chr2 96127395 96127465 -154560389 - MER5A DNA MER1_type -82 107 26 388 120 173 0 chr2 96129253 96129328 -154558526 - MER5A DNA MER1_type -83 106 19 416 185 11 33 chr2 96131335 96131427 -154556427 + L1PA12 LINE L1 815 904 -6677 426 214 0 11 chr2 96131440 96131529 -154556325 + L1PA12 LINE L1 814 901 -6680 371 228 18 88 chr2 96131529 96131643 -154556211 + L1PA12 LINE L1 798 903 -6678 534 244 221 32 chr2 96131643 96131955 -154555899 + L1PA12 LINE L1 799 1169 -6412 380 223 48 10 chr2 96131958 96132061 -154555793 + L1PA12 LINE L1 798 904 -6677 367 250 22 0 chr2 96132061 96132153 -154555701 + L1PA12 LINE L1 799 892 -6689 433 151 47 0 chr2 96132177 96132263 -154555591 + L1PA12 LINE L1 814 903 -6678 507 157 0 0 chr2 96132277 96132360 -154555494 + L1PA12 LINE L1 815 897 -6684 598 225 269 31 chr2 96132379 96132873 -154554981 + L1PA12 LINE L1 799 1174 -6407 392 236 0 11 chr2 96132886 96132975 -154554879 + L1PA12 LINE L1 814 901 -6680 390 210 17 84 chr2 96132970 96133089 -154554765 + L1PA12 LINE L1 793 903 -6678 * 389 239 11 0 chr2 96133102 96133190 -154554664 + L1PA12 LINE L1 815 903 -6678 469 178 11 0 chr2 96133203 96133293 -154554561 + L1PA12 LINE L1 814 904 -6677 284 231 17 94 chr2 96133405 96133522 -154554332 + L1PA12 LINE L1 793 900 -6681 1183 233 47 11 chr2 96133525 96133804 -154554050 + L1PA12 LINE L1 802 1090 -6491 3015 205 86 7 chr2 96133804 96134509 -154553345 - L1PA12 LINE L1 -6411 1170 5 243 250 69 14 chr2 96134688 96134760 -154553094 + MIR SINE MIR 100 175 -87 19752 168 22 9 chr2 96134802 96138580 -154549274 + L1PA12 LINE L1 6 3827 -3757 3617 227 42 63 chr2 96138587 96140223 -154547631 + L1PA12 LINE L1 1131 2264 -4734 1028 99 49 0 chr2 96140195 96140357 -154547497 + L1PA12 LINE L1 2808 2977 -4604 * 586 67 0 0 chr2 96140357 96140432 -154547422 - L1PA12 LINE L1 -4918 1543 1469 * 3698 196 18 11 chr2 96140430 96141217 -154546637 + L1PA12 LINE L1 1530 2321 -4140 * 6519 40 0 2 chr2 96141213 96142011 -154545843 - L1PA2 LINE L1 -2484 3662 2867 15667 26 0 0 chr2 96142011 96144529 -154543325 + L1PA2 LINE L1 3631 6152 -3 6776 151 20 6 chr2 96144530 96145702 -154542152 + L1PA12 LINE L1 2311 3499 -2962 * 7921 796 201 36 chr2 96145695 96145710 -154542144 + L1PA10 LINE L1 2369 2380 -3788 7921 113 23 5 chr2 96145710 96146497 -154541357 + L1PA10 LINE L1 4157 4928 -1240 2199 124 0 0 chr2 96146497 96146788 -154541066 - AluSc SINE Alu -18 291 1 7921 113 23 5 chr2 96146788 96148044 -154539810 + L1PA10 LINE L1 4928 6166 -2 7921 796 201 36 chr2 96148044 96149304 -154538550 + L1PA10 LINE L1 2380 3431 -2737 378 0 0 0 chr2 96149304 96149346 -154538508 + (CA)n Simple_repeat Simple_repeat 1 42 0 7921 796 201 36 chr2 96149346 96149677 -154538177 + L1PA10 LINE L1 3431 6166 -2 3226 143 170 24 chr2 96149652 96150351 -154537503 - L1P LINE L1 -1356 4790 3990 * 186 216 27 0 chr2 96153576 96153613 -154534241 + L2 LINE L2 3004 3041 -231 198 0 0 0 chr2 96153731 96153753 -154534101 + (CAT)n Simple_repeat Simple_repeat 2 23 0 519 259 85 36 chr2 96153764 96153988 -154533866 - MIR SINE MIR -25 237 3 200 206 0 0 chr2 96154547 96154581 -154533273 + polypyrimidine Low_complexity Low_complexity 2 35 0 724 182 0 0 chr2 96155204 96155314 -154532540 + AluJb SINE Alu 2 111 -201 1828 128 15 0 chr2 96155316 96155581 -154532273 + MSTA LTR MaLR 1 269 -159 1035 214 15 11 chr2 96155759 96156026 -154531828 + L1MC3 LINE L1 7511 7778 -7 1987 134 0 42 chr2 96156282 96156589 -154531265 - AluSx SINE Alu -18 294 1 1312 200 112 15 chr2 96156671 96156931 -154530923 + AluJo SINE Alu 1 285 -17 213 39 0 0 chr2 96156931 96156957 -154530897 + (TAGA)n Simple_repeat Simple_repeat 4 29 0 213 298 100 30 chr2 96157111 96157255 -154530599 - MIR SINE MIR -50 212 66 342 0 0 0 chr2 96157436 96157474 -154530380 + (TG)n Simple_repeat Simple_repeat 1 38 0 201 132 0 0 chr2 96157474 96157512 -154530342 + (GA)n Simple_repeat Simple_repeat 2 39 0 630 202 8 8 chr2 96158236 96158355 -154529499 - FLAM_C SINE Alu 0 143 25 244 163 265 41 chr2 96158883 96158981 -154528873 + MER5C DNA MER1_type 5 124 -200 190 200 111 0 chr2 96159001 96159046 -154528808 + MER5C DNA MER1_type 273 322 -2 181 211 35 53 chr2 96159418 96159475 -154528379 + L2 LINE L2 2922 2977 -336 6899 47 2 4 chr2 96160206 96161043 -154526811 - L1PA5 LINE L1 -1333 4813 3978 7949 38 0 0 chr2 96161044 96162404 -154525450 + L1PA5 LINE L1 4788 6147 -7 1463 165 0 16 chr2 96163292 96163541 -154524313 + L1PA12 LINE L1 1 245 -7336 849 152 0 0 chr2 96163539 96163677 -154524177 + L1PA12 LINE L1 3284 3421 -4163 * 7920 134 56 9 chr2 96163692 96163998 -154523856 + L1PA12 LINE L1 4287 4577 -3007 387 0 0 0 chr2 96163998 96164041 -154523813 + (CA)n Simple_repeat Simple_repeat 2 44 0 7920 134 56 9 chr2 96164041 96165081 -154522773 + L1PA12 LINE L1 4577 5697 -1887 1659 119 0 8 chr2 96165083 96165351 -154522503 - AluSc SINE Alu 0 313 48 342 270 69 38 chr2 96169155 96169320 -154518534 - MIR SINE MIR -62 146 2 203 303 157 42 chr2 96169456 96169567 -154518287 - L2 LINE L2 -1670 1644 1547 1471 180 56 32 chr2 96169567 96169851 -154518003 - AluJb SINE Alu -10 292 2 203 303 157 42 chr2 96169851 96170000 -154517854 - L2 LINE L2 -1767 1547 1354 208 253 108 23 chr2 96170047 96170134 -154517720 - L2 LINE L2 -2090 1224 1131 821 293 222 20 chr2 96170395 96171047 -154516807 + L2 LINE L2 2187 2970 -344 347 289 11 11 chr2 96174964 96175054 -154512800 - L1MC4 LINE L1 -1339 6703 6614 347 304 11 11 chr2 96174979 96175071 -154512783 + L1MC4 LINE L1 6612 6703 -1339 1894 198 32 92 chr2 96177741 96178308 -154509546 + MLT2B3 LTR ERVL 1 533 -21 629 191 8 16 chr2 96178494 96178620 -154509234 - MLT2B3 LTR ERVL -329 225 101 334 316 90 17 chr2 96179046 96179223 -154508631 + L3 LINE CR1 577 766 -811 745 321 46 19 chr2 96179363 96179730 -154508124 - MLT1K LTR MaLR -40 548 172 37042 83 9 9 chr2 96180947 96187088 -154500766 - L1PA6 LINE L1 0 6154 11 3947 213 39 7 chr2 96187384 96188361 -154499493 + L1MB3 LINE L1 5265 6176 -7 1403 216 256 19 chr2 96188388 96188915 -154498939 + MLT1E1 LTR MaLR 3 654 0 840 180 25 0 chr2 96188957 96189118 -154498736 + FRAM SINE Alu 1 165 -1 342 308 93 51 chr2 96189125 96189505 -154498349 + L1ME3A LINE L1 5497 5895 -275 383 305 75 11 chr2 96190024 96190198 -154497656 - MLT1K LTR MaLR -214 374 190 1340 270 58 16 chr2 96191146 96191591 -154496263 - MLT1L LTR MaLR 0 615 152 286 157 0 0 chr2 96191710 96191761 -154496093 + MLT1L LTR MaLR 344 394 -221 228 210 161 12 chr2 96191840 96191921 -154495933 + MLT1L LTR MaLR 523 615 0 247 301 29 37 chr2 96192345 96192481 -154495373 - MLT1J LTR MaLR -146 365 231 381 295 131 54 chr2 96193532 96193922 -154493932 - MLT1K LTR MaLR -15 573 154 1419 223 104 34 chr2 96194108 96194580 -154493274 + MLT1D LTR MaLR 1 505 0 1145 203 51 22 chr2 96194635 96194716 -154493138 - MER33 DNA MER1_type -2261 324 247 2117 136 7 0 chr2 96194716 96195026 -154492828 + AluSx SINE Alu 1 312 0 1145 203 51 22 chr2 96195026 96195259 -154492595 - MER33 DNA MER1_type -2338 247 1 215 216 54 27 chr2 96196508 96196582 -154491272 - MIR SINE MIR -60 202 127 494 257 80 11 chr2 96196591 96196766 -154491088 - MLT1I LTR MaLR 0 409 223 261 261 159 0 chr2 96198249 96198337 -154489517 + MIR3 SINE MIR 85 186 -22 810 276 55 55 chr2 96198532 96198953 -154488901 + LTR7 LTR ERV1 24 444 -6 992 254 68 36 chr2 96199132 96199517 -154488337 - MLT1I LTR MaLR -12 397 1 409 207 25 50 chr2 96199999 96200120 -154487734 + MIR SINE MIR 48 165 -97 361 324 17 45 chr2 96201835 96202014 -154485840 + L1ME LINE L1 5571 5746 -375 258 319 69 9 chr2 96202148 96202264 -154485590 - L2 LINE L2 0 3313 3191 204 327 10 48 chr2 96203358 96203462 -154484392 + MIR SINE MIR 113 212 -50 243 224 31 82 chr2 96203556 96203654 -154484200 - MIR SINE MIR -123 139 47 1209 160 5 3 chr2 96205291 96206235 -154481619 + (TCCA)n Simple_repeat Simple_repeat 1 1125 0 332 260 49 32 chr2 96206290 96206413 -154481441 + L2 LINE L2 3187 3311 -2 194 387 26 13 chr2 96206483 96206638 -154481216 - MIR3 SINE MIR -44 164 8 359 222 30 20 chr2 96207008 96207107 -154480747 + MIR SINE MIR 25 124 -84 272 310 152 15 chr2 96207624 96207821 -154480033 + MIR SINE MIR 2 225 -37 320 100 80 0 chr2 96208178 96208228 -154479626 - MSTB LTR MaLR -372 54 1 204 322 70 70 chr2 96208390 96208719 -154479135 + L2 LINE L2 2943 3271 -1 1234 145 11 0 chr2 96211026 96211212 -154476642 - AluSq SINE Alu -20 293 106 247 210 81 0 chr2 96212884 96212946 -154474908 + MER117 DNA MER1_type 53 119 -78 235 342 103 16 chr2 96213784 96213968 -154473886 - MIR SINE MIR -18 244 45 3338 196 24 32 chr2 96214381 96215005 -154472849 - L1MC1 LINE L1 -456 5877 5249 2123 108 0 46 chr2 96215005 96215310 -154472544 + AluSx SINE Alu 1 291 -21 3338 196 24 32 chr2 96215310 96216213 -154471641 - L1MC1 LINE L1 -1084 5249 4369 6737 137 20 9 chr2 96216281 96217468 -154470386 - L1MA2 LINE L1 -27 6277 5104 1684 194 4 0 chr2 96217468 96217747 -154470107 + AluSx SINE Alu 1 280 -32 555 56 0 0 chr2 96217748 96217819 -154470035 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 6737 137 20 9 chr2 96217819 96218858 -154468996 - L1MA2 LINE L1 -1199 5105 4022 4753 231 21 25 chr2 96218846 96218977 -154468877 - L1MC1 LINE L1 -1748 4398 4268 * 1962 162 3 13 chr2 96218977 96219291 -154468563 - AluJb SINE Alu -1 311 1 4753 231 21 25 chr2 96219291 96220101 -154467753 - L1MC1 LINE L1 -1878 4268 3456 1838 157 11 0 chr2 96220101 96220388 -154467466 - AluJb SINE Alu -12 300 11 4753 231 21 25 chr2 96220388 96221367 -154466487 - L1MC1 LINE L1 -2690 3456 2489 271 276 69 26 chr2 96221425 96221541 -154466313 + L1MC/D LINE L1 5500 5574 -759 222 247 0 0 chr2 96221555 96221648 -154466206 + CT-rich Low_complexity Low_complexity 2 94 0 211 62 0 62 chr2 96221685 96221733 -154466121 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 2142 137 0 0 chr2 96221759 96222066 -154465788 - AluSx SINE Alu -5 307 1 691 236 28 11 chr2 96222090 96222272 -154465582 - L1MC5 LINE L1 -1048 6913 6729 459 265 44 57 chr2 96222736 96223125 -154464729 + L1MC5 LINE L1 7293 7676 -285 815 191 132 62 chr2 96223125 96223382 -154464472 + ORSL DNA AcHobo 1 275 0 447 340 42 0 chr2 96223695 96223886 -154463968 - L3 LINE CR1 -364 1213 1015 474 261 57 61 chr2 96224449 96224894 -154462960 + L1MEc LINE L1 660 1062 -5143 2069 151 68 34 chr2 96225389 96225432 -154462422 - MSTA LTR MaLR -2 426 386 2301 113 0 0 chr2 96225432 96225725 -154462129 + AluSg SINE Alu 1 293 -17 2069 151 68 34 chr2 96225725 96226093 -154461761 - MSTA LTR MaLR -42 386 1 2085 73 0 33 chr2 96226199 96226494 -154461360 - AluY SINE Alu 0 308 23 192 243 279 29 chr2 96228283 96228419 -154459435 - MER5B DNA MER1_type -5 173 4 2356 103 0 0 chr2 96228524 96228826 -154459028 + AluSx SINE Alu 1 302 -10 223 229 12 12 chr2 96229540 96229623 -154458231 + CT-rich Low_complexity Low_complexity 2 84 0 808 136 108 53 chr2 96229921 96230148 -154457706 + LTR54B LTR ERV1 1 247 -263 2044 193 28 2 chr2 96230183 96230576 -154457278 + MER57A LTR ERV1 1 403 0 1284 157 66 6 chr2 96230746 96231745 -154456109 + L1MC1 LINE L1 5184 6333 0 2554 83 8 25 chr2 96231953 96232314 -154455540 + THE1A LTR MaLR 1 355 0 12129 91 2 1 chr2 96232314 96233891 -154453963 + THE1A-int LTR MaLR 2 1580 0 2434 93 20 25 chr2 96233891 96234246 -154453608 + THE1A LTR MaLR 1 353 -2 427 219 10 10 chr2 96234496 96234592 -154453262 + MLT1K LTR MaLR 115 210 -378 354 258 42 17 chr2 96234594 96234714 -154453140 + MLT1K LTR MaLR 458 580 -8 455 262 5 43 chr2 96235254 96235319 -154452535 - MER5B DNA MER1_type -1 188 122 2313 70 0 11 chr2 96235319 96235645 -154452209 + AluY SINE Alu 1 323 0 455 262 5 43 chr2 96235645 96235750 -154452104 - MER5B DNA MER1_type -67 122 20 198 315 18 45 chr2 96235653 96235764 -154452090 + MER5A DNA MER1_type 74 181 -8 * 236 254 67 141 chr2 96236102 96236386 -154451468 + L2 LINE L2 3048 3310 -3 1913 114 38 21 chr2 96236978 96237267 -154450587 + AluSg1 SINE Alu 1 294 -15 204 245 0 0 chr2 96238125 96238174 -154449680 + (TTA)n Simple_repeat Simple_repeat 3 51 0 213 39 0 0 chr2 96238202 96238228 -154449626 + (A)n Simple_repeat Simple_repeat 1 26 0 255 191 128 53 chr2 96238340 96238434 -154449420 + LTR50 LTR ERVL 143 243 -552 248 325 72 5 chr2 96238437 96238631 -154449223 + L2 LINE L2 2551 2757 -557 1698 193 84 0 chr2 96238690 96239011 -154448843 + MLT1A1 LTR MaLR 1 348 -17 503 266 139 12 chr2 96239678 96239851 -154448003 + MIR SINE MIR 1 195 -67 662 317 44 4 chr2 96240453 96240680 -154447174 + MIR SINE MIR 8 243 -19 480 77 0 0 chr2 96240700 96240765 -154447089 + (TGG)n Simple_repeat Simple_repeat 3 67 0 260 230 64 14 chr2 96240795 96240874 -154446980 - MIR SINE MIR -63 145 68 216 337 10 0 chr2 96242070 96242168 -154445686 + MIR SINE MIR 38 136 -72 236 265 56 97 chr2 96243534 96243678 -154444176 + MIR3 SINE MIR 16 151 -57 843 169 48 48 chr2 96243678 96243867 -154443987 - MER5A DNA MER1_type 0 189 1 236 265 56 97 chr2 96243867 96243918 -154443936 + MIR3 SINE MIR 151 203 -5 1613 166 17 24 chr2 96243986 96244281 -154443573 + AluJo SINE Alu 1 293 -19 203 133 22 0 chr2 96244281 96244326 -154443528 + GA-rich Low_complexity Low_complexity 1 46 0 373 319 43 0 chr2 96245217 96245358 -154442496 + MER115 DNA AcHobo 28 174 -519 329 314 117 17 chr2 96246027 96246266 -154441588 + L3 LINE CR1 766 1028 -549 1324 261 96 31 chr2 96246545 96247085 -154440769 + L1ME4a LINE L1 5545 6119 -2 495 33 0 0 chr2 96248196 96248257 -154439597 + (CA)n Simple_repeat Simple_repeat 1 61 0 335 273 23 0 chr2 96248715 96248803 -154439051 - L1MC4 LINE L1 -1339 6703 6614 * 348 289 0 0 chr2 96248751 96248841 -154439013 + L1MC4 LINE L1 6614 6703 -1339 2450 59 0 7 chr2 96248846 96249136 -154438718 - AluY SINE Alu -21 290 3 350 268 98 0 chr2 96249264 96249376 -154438478 + MIR3 SINE MIR 78 200 -8 859 231 57 0 chr2 96249401 96249613 -154438241 + MER58A DNA MER1_type 1 224 0 231 255 75 11 chr2 96250111 96250205 -154437649 + MIR SINE MIR 16 115 -147 365 175 0 12 chr2 96250382 96250462 -154437392 + (TA)n Simple_repeat Simple_repeat 2 80 0 216 312 13 0 chr2 96250493 96250570 -154437284 + (CATA)n Simple_repeat Simple_repeat 2 79 0 183 184 0 0 chr2 96250576 96250614 -154437240 + (TA)n Simple_repeat Simple_repeat 2 39 0 2094 220 53 32 chr2 96253363 96253894 -154433960 + MLT1F LTR MaLR 1 542 0 189 393 37 0 chr2 96254002 96254109 -154433745 - MIR SINE MIR -81 127 17 1932 180 89 36 chr2 96255533 96256005 -154431849 + L1ME1 LINE L1 5665 6161 -5 2465 80 0 0 chr2 96256152 96256452 -154431402 - AluY SINE Alu -11 300 1 2619 58 0 3 chr2 96256738 96257049 -154430805 + AluY SINE Alu 1 310 -1 267 325 97 19 chr2 96257371 96257525 -154430329 - L3 LINE CR1 -25 1552 1387 432 55 0 0 chr2 96257529 96257584 -154430270 + (ATG)n Simple_repeat Simple_repeat 2 56 0 874 247 31 18 chr2 96257607 96257834 -154430020 - MIR SINE MIR -4 258 29 469 336 29 29 chr2 96257946 96258184 -154429670 - L3 LINE CR1 -307 1270 1033 234 294 32 24 chr2 96258734 96258860 -154428994 - MIR SINE MIR -44 218 92 396 0 0 0 chr2 96260237 96260281 -154427573 + (TG)n Simple_repeat Simple_repeat 1 44 0 387 291 55 16 chr2 96261399 96261581 -154426273 - MIR SINE MIR -24 238 50 1009 279 46 38 chr2 96261729 96262364 -154425490 + L1M4 LINE L1 4786 5419 -737 2182 106 0 7 chr2 96262568 96262852 -154425002 + AluSq SINE Alu 1 282 -31 250 343 41 7 chr2 96264048 96264194 -154423660 - MIR SINE MIR -13 249 99 269 254 0 0 chr2 96264505 96264560 -154423294 + CT-rich Low_complexity Low_complexity 3 57 0 251 271 29 0 chr2 96264560 96264630 -154423224 - L2 LINE L2 -15 3257 3186 234 333 144 44 chr2 96267269 96267629 -154420225 + L3 LINE CR1 1179 1574 -3 357 284 24 108 chr2 96268289 96268585 -154419269 + L2 LINE L2 2949 3219 -53 186 143 18 36 chr2 96268601 96268657 -154419197 + GA-rich Low_complexity Low_complexity 4 58 0 2875 3 0 22 chr2 96271279 96271596 -154416258 + AluYa5 SINE Alu 1 310 -1 195 39 0 0 chr2 96272016 96272042 -154415812 + MIR SINE MIR 114 139 -123 556 314 25 0 chr2 96272055 96272214 -154415640 - MIR SINE MIR -6 256 94 456 252 67 0 chr2 96272567 96272686 -154415168 + MIR SINE MIR 125 251 -11 207 204 0 0 chr2 96273080 96273124 -154414730 + (CA)n Simple_repeat Simple_repeat 1 44 0 441 277 0 0 chr2 96273852 96273946 -154413908 + L2 LINE L2 3220 3313 0 195 133 0 89 chr2 96276038 96276083 -154411771 - L3 LINE CR1 -266 1311 1271 198 71 0 0 chr2 96276392 96276420 -154411434 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 351 325 95 8 chr2 96276558 96276684 -154411170 + MER5A DNA MER1_type 53 189 0 396 304 30 12 chr2 96276818 96277007 -154410847 - MIR SINE MIR -59 203 13 195 189 0 0 chr2 96277456 96277509 -154410345 + GA-rich Low_complexity Low_complexity 1 53 0 587 146 10 0 chr2 96277510 96277606 -154410248 - Charlie1 DNA MER1_type -584 2177 2081 357 285 117 0 chr2 96277611 96277748 -154410106 - Charlie1 DNA MER1_type -2608 153 1 199 365 87 10 chr2 96277750 96277854 -154410000 + MIR3 SINE MIR 9 120 -88 387 302 9 26 chr2 96278182 96278298 -154409556 + L2 LINE L2 3142 3255 -17 1879 182 52 21 chr2 96280689 96281073 -154406781 + MSTD LTR MaLR 1 396 0 2220 105 7 0 chr2 96281101 96281395 -154406459 + AluY SINE Alu 1 296 -15 253 251 51 64 chr2 96281423 96281658 -154406196 + L1ME4a LINE L1 5713 5944 -177 293 298 4 59 chr2 96282756 96283092 -154404762 + GA-rich Low_complexity Low_complexity 1 317 0 531 0 0 0 chr2 96283362 96283421 -154404433 + (TG)n Simple_repeat Simple_repeat 1 59 0 384 269 59 17 chr2 96283469 96283588 -154404266 + MIR SINE MIR 84 207 -55 284 208 143 0 chr2 96284130 96284207 -154403647 + L2 LINE L2 3189 3276 -37 307 307 233 7 chr2 96284245 96284395 -154403459 - MIR SINE MIR -59 203 20 461 263 73 20 chr2 96284797 96284990 -154402864 + MIR SINE MIR 16 212 -50 538 281 47 59 chr2 96285187 96285440 -154402414 + MIR SINE MIR 1 250 -12 214 341 59 0 chr2 96286020 96286105 -154401749 - L2 LINE L2 -37 3235 3146 22 0 0 0 chr2 96286321 96286343 -154401511 + AT_rich Low_complexity Low_complexity 1 22 0 212 295 16 0 chr2 96286657 96286718 -154401136 + L2 LINE L2 2999 3060 -212 193 200 0 0 chr2 96286928 96286963 -154400891 + L2 LINE L2 3265 3299 -14 288 250 14 14 chr2 96286963 96287103 -154400751 + GA-rich Low_complexity Low_complexity 4 143 0 193 269 186 41 chr2 96288074 96288219 -154399635 - L2 LINE L2 0 3313 3148 191 275 0 0 chr2 96288255 96288295 -154399559 - L3 LINE CR1 -12 1565 1526 505 196 21 0 chr2 96288497 96288594 -154399260 + MIR3 SINE MIR 109 207 -1 620 267 73 30 chr2 96289214 96289446 -154398408 - MIR SINE MIR -4 258 17 216 268 14 14 chr2 96289656 96289794 -154398060 + GA-rich Low_complexity Low_complexity 4 141 0 757 174 0 8 chr2 96290312 96290433 -154397421 + FLAM_A SINE Alu 8 127 -15 322 298 53 9 chr2 96290967 96291081 -154396773 + MIR SINE MIR 19 137 -125 406 325 51 69 chr2 96291149 96291484 -154396370 + L2 LINE L2 2897 3225 -47 257 230 27 14 chr2 96291952 96292026 -154395828 + CT-rich Low_complexity Low_complexity 4 78 0 196 311 33 0 chr2 96293716 96293777 -154394077 - L3b LINE CR1 -115 1468 1406 392 307 13 24 chr2 96293992 96294156 -154393698 + MIR SINE MIR 24 186 -67 700 266 158 4 chr2 96294785 96295063 -154392791 + LTR16A LTR ERVL 93 413 -37 433 253 0 0 chr2 96295063 96295158 -154392696 - MIR SINE MIR -130 132 38 354 254 51 34 chr2 96295472 96295590 -154392264 + MIR SINE MIR 84 203 -59 479 337 17 11 chr2 96295811 96295986 -154391868 + MIR3 SINE MIR 31 206 -2 260 214 204 0 chr2 96297223 96297321 -154390533 + MER117 DNA MER1_type 2 119 -78 275 280 153 0 chr2 96298154 96298272 -154389582 - MIR3 SINE MIR -9 199 64 301 294 164 79 chr2 96298784 96299076 -154388778 - L3 LINE CR1 -103 1474 1158 185 357 14 14 chr2 96299453 96299523 -154388331 + MIR3 SINE MIR 130 199 -9 213 217 0 72 chr2 96299938 96300007 -154387847 + MIR3 SINE MIR 96 159 -49 209 304 38 25 chr2 96299984 96300063 -154387791 + MER5A DNA MER1_type 11 90 -99 * 221 237 34 0 chr2 96300175 96300234 -154387620 + MER5B DNA MER1_type 4 64 -114 681 217 15 3 chr2 96300234 96300391 -154387463 + L1ME1 LINE L1 6017 6178 0 354 222 222 0 chr2 96300572 96300662 -154387192 + MER5B DNA MER1_type 68 177 -1 531 248 17 9 chr2 96301211 96301345 -154386509 - MIR SINE MIR -54 154 20 236 301 75 30 chr2 96302401 96302534 -154385320 - MIR3 SINE MIR -12 196 58 353 255 131 20 chr2 96304678 96304831 -154383023 + MIR SINE MIR 81 250 -12 1075 197 66 90 chr2 96306425 96306790 -154381064 - MLT1A1 LTR MaLR -6 359 4 183 42 0 0 chr2 96307078 96307102 -154380752 + (TG)n Simple_repeat Simple_repeat 2 25 0 186 380 59 18 chr2 96307180 96307572 -154380282 - L2 LINE L2 -1041 2273 1866 1425 241 82 27 chr2 96307628 96308067 -154379787 + MLT1C LTR MaLR 3 465 -2 189 0 0 0 chr2 96308195 96308216 -154379638 + (GA)n Simple_repeat Simple_repeat 2 22 0 332 104 0 65 chr2 96308530 96308600 -154379254 - MLT2B1 LTR ERVL 0 515 455 1993 174 108 25 chr2 96308684 96309120 -154378734 - MLT2B1 LTR ERVL -48 472 1 248 299 69 0 chr2 96309700 96309787 -154378067 - MIR3 SINE MIR -6 202 110 441 0 0 0 chr2 96309841 96309890 -154377964 + (TG)n Simple_repeat Simple_repeat 2 50 0 2128 214 34 61 chr2 96310785 96311341 -154376513 - MLT1F LTR MaLR -1 541 1 915 230 6 0 chr2 96311421 96311595 -154376259 - MER5A DNA MER1_type -2 187 13 196 235 0 39 chr2 96311653 96311704 -154376150 + MER5B DNA MER1_type 1 49 -129 2828 62 8 8 chr2 96311847 96312217 -154375637 + L1PB1 LINE L1 5773 6142 -9 530 365 97 17 chr2 96312245 96312708 -154375146 - L3 LINE CR1 -130 1447 948 360 164 0 0 chr2 96313080 96313147 -154374707 + GA-rich Low_complexity Low_complexity 2 68 0 276 267 33 11 chr2 96313800 96313890 -154373964 - L2 LINE L2 -22 3291 3200 437 303 48 32 chr2 96314343 96314531 -154373323 + MIR SINE MIR 21 211 -51 218 395 76 36 chr2 96315103 96315326 -154372528 - L2 LINE L2 0 3272 3041 248 366 9 17 chr2 96315671 96315801 -154372053 + MIR SINE MIR 13 141 -67 311 331 51 45 chr2 96315906 96316063 -154371791 + L2 LINE L2 3102 3259 -13 558 271 114 14 chr2 96316909 96317119 -154370735 - MIR SINE MIR -4 258 28 1588 167 50 25 chr2 96317707 96317823 -154370031 + AluJo SINE Alu 3 115 -197 216 0 0 0 chr2 96317823 96317847 -154370007 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 1588 167 50 25 chr2 96317847 96318011 -154369843 + AluJo SINE Alu 115 290 -22 217 244 0 0 chr2 96319086 96319127 -154368727 + L2 LINE L2 3181 3221 -51 1052 281 25 22 chr2 96319183 96319503 -154368351 - L2 LINE L2 -3 3310 2990 336 349 78 56 chr2 96319795 96320093 -154367761 + L2 LINE L2 2550 2840 -432 318 87 0 0 chr2 96320093 96320139 -154367715 + (CA)n Simple_repeat Simple_repeat 2 47 0 336 349 78 56 chr2 96320139 96320527 -154367327 + L2 LINE L2 2840 3259 -13 206 159 29 87 chr2 96320754 96320823 -154367031 - MIR3 SINE MIR -137 71 7 260 128 128 0 chr2 96321335 96321382 -154366472 - AluSg/x SINE Alu -49 253 201 513 286 151 5 chr2 96321843 96322042 -154365812 - MIR SINE MIR -7 255 28 290 323 189 15 chr2 96322684 96322885 -154364969 + MIR SINE MIR 14 249 -13 893 195 29 15 chr2 96323915 96324120 -154363734 + L1PA16 LINE L1 5833 6040 -126 339 302 168 51 chr2 96324120 96324514 -154363340 + L1M2 LINE L1 598 1037 -5812 337 150 50 0 chr2 96326818 96326878 -154360976 + L1PA16 LINE L1 6021 6083 -83 221 0 0 33 chr2 96327028 96327058 -154360796 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1348 178 12 19 chr2 96327060 96327319 -154360535 - AluJb SINE Alu -27 285 29 221 83 28 0 chr2 96327320 96327356 -154360498 + (TA)n Simple_repeat Simple_repeat 2 38 0 300 159 0 72 chr2 96327424 96327493 -154360361 - L1MC4 LINE L1 -1331 6711 6648 1616 192 6 34 chr2 96328004 96328353 -154359501 - MER2 DNA MER2_type 0 345 7 27 0 0 0 chr2 96332747 96332774 -154355080 + AT_rich Low_complexity Low_complexity 1 27 0 237 198 31 0 chr2 96333742 96333838 -154354016 + (TA)n Simple_repeat Simple_repeat 1 99 0 1609 174 4 0 chr2 96333880 96334145 -154353709 - AluSx SINE Alu -46 266 1 263 127 0 36 chr2 96335651 96335706 -154352148 + (CATATA)n Simple_repeat Simple_repeat 3 55 0 2028 153 0 6 chr2 96336028 96336342 -154351512 - AluSx SINE Alu 0 312 1 721 278 79 0 chr2 96336973 96337225 -154350629 + MLT2B1 LTR ERVL 184 455 -65 1611 119 0 0 chr2 96337238 96337456 -154350398 + AluSq SINE Alu 51 268 -45 260 212 15 0 chr2 96337463 96337529 -154350325 + CT-rich Low_complexity Low_complexity 2 68 0 29 60 0 0 chr2 96337577 96337627 -154350227 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr2 96337891 96337912 -154349942 + AT_rich Low_complexity Low_complexity 1 21 0 219 278 14 14 chr2 96338920 96338992 -154348862 + GA-rich Low_complexity Low_complexity 2 73 0 26 0 0 0 chr2 96341220 96341246 -154346608 + AT_rich Low_complexity Low_complexity 1 26 0 30 45 0 0 chr2 96341803 96341847 -154346007 + AT_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr2 96341947 96341976 -154345878 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 96342014 96342039 -154345815 + AT_rich Low_complexity Low_complexity 1 25 0 1048 248 74 61 chr2 96342385 96342829 -154345025 + MLT1C LTR MaLR 17 466 -1 773 170 7 22 chr2 96342929 96343064 -154344790 + FLAM_C SINE Alu 1 133 0 1631 153 35 31 chr2 96343094 96343382 -154344472 + AluJo SINE Alu 1 289 -23 53 49 0 0 chr2 96343586 96343667 -154344187 + AT_rich Low_complexity Low_complexity 1 81 0 385 221 35 18 chr2 96343715 96343828 -154344026 + HAL1 LINE L1 1009 1123 -1384 1920 128 3 0 chr2 96344386 96344692 -154343162 - AluSx SINE Alu 0 307 1 435 196 0 0 chr2 96345162 96345259 -154342595 - L1MA6 LINE L1 0 6300 6204 21 71 0 0 chr2 96345558 96345600 -154342254 + AT_rich Low_complexity Low_complexity 1 42 0 193 309 44 29 chr2 96345738 96345806 -154342048 + MER5A DNA MER1_type 115 183 -6 1604 205 3 22 chr2 96345935 96346247 -154341607 - AluJo SINE Alu -6 306 1 1808 129 3 18 chr2 96347616 96347931 -154339923 - AluSx SINE Alu 0 311 1 873 232 158 18 chr2 96349798 96350190 -154337664 + LTR54B LTR ERV1 46 492 -6 432 0 0 0 chr2 96350250 96350298 -154337556 + (CA)n Simple_repeat Simple_repeat 2 49 0 1457 181 4 0 chr2 96350593 96350864 -154336990 - AluSx SINE Alu 0 310 39 581 275 0 0 chr2 96352029 96352219 -154335635 + FLAM_C SINE Alu 1 190 0 1528 211 24 13 chr2 96353306 96353604 -154334250 - AluJo SINE Alu -11 301 1 32 0 0 0 chr2 96353850 96353882 -154333972 + AT_rich Low_complexity Low_complexity 1 32 0 651 249 90 40 chr2 96353933 96354210 -154333644 + pTR5 LTR ERV1 738 1028 -1410 3202 124 268 17 chr2 96354397 96355057 -154332797 + LTR12 LTR ERV1 1 826 0 242 256 0 70 chr2 96355214 96355300 -154332554 + MIR SINE MIR 172 251 -11 1868 192 55 40 chr2 96355367 96355842 -154332012 - MER66B LTR ERV1 -2 484 3 552 235 0 0 chr2 96356181 96356296 -154331558 + FLAM_A SINE Alu 1 115 -18 21 36 0 0 chr2 96356592 96356620 -154331234 + AT_rich Low_complexity Low_complexity 1 28 0 1500 187 40 42 chr2 96356739 96357119 -154330735 - LTR1 LTR ERV1 -165 620 242 252 214 0 0 chr2 96357205 96357261 -154330593 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 319 366 52 54 chr2 96359096 96359296 -154328558 + L2 LINE L2 2793 2990 -323 441 36 0 0 chr2 96359296 96359351 -154328503 + (CA)n Simple_repeat Simple_repeat 1 55 0 319 366 52 54 chr2 96359351 96359466 -154328388 + L2 LINE L2 2990 3104 -209 312 353 13 32 chr2 96359938 96360094 -154327760 + L2 LINE L2 753 905 -2409 299 174 114 66 chr2 96360216 96360246 -154327608 + Charlie5 DNA MER1_type 2405 2432 -192 1279 219 20 10 chr2 96360246 96360548 -154327306 + AluJb SINE Alu 1 305 -7 299 174 114 66 chr2 96360548 96360684 -154327170 + Charlie5 DNA MER1_type 2432 2579 -45 2474 109 0 0 chr2 96360689 96361048 -154326806 + L1PA13 LINE L1 5801 6159 -4 357 277 96 45 chr2 96361149 96361358 -154326496 + L1M4 LINE L1 2962 3159 -2987 2214 122 0 0 chr2 96361358 96361653 -154326201 - AluSx SINE Alu -13 299 5 357 277 96 45 chr2 96361653 96362081 -154325773 + L1M4 LINE L1 3159 3631 -2515 723 256 0 6 chr2 96362092 96362268 -154325586 - FRAM SINE Alu -2 174 1 456 300 88 20 chr2 96362306 96362762 -154325092 + L1M4 LINE L1 3680 4166 -1980 327 104 0 0 chr2 96362949 96362997 -154324857 + (CA)n Simple_repeat Simple_repeat 1 48 0 287 333 13 0 chr2 96363107 96363185 -154324669 - MIR SINE MIR -181 81 3 358 296 13 38 chr2 96364808 96364967 -154322887 + MLT1G3 LTR MaLR 137 291 -239 230 54 0 27 chr2 96365106 96365143 -154322711 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 648 207 35 0 chr2 96365383 96365528 -154322326 + Tigger3(Golem) DNA MER2_type 2879 3028 -1 203 240 0 0 chr2 96368064 96368114 -154319740 + (CA)n Simple_repeat Simple_repeat 1 50 0 1829 154 0 29 chr2 96368294 96368600 -154319254 + AluSx SINE Alu 5 301 -11 272 286 51 31 chr2 96370939 96371037 -154316817 + L2 LINE L2 3181 3280 -33 2040 92 0 51 chr2 96372361 96372676 -154315178 + AluY SINE Alu 1 299 -12 441 216 32 56 chr2 96372746 96372871 -154314983 + FLAM_C SINE Alu 1 122 -21 22 0 0 0 chr2 96372874 96372896 -154314958 + AT_rich Low_complexity Low_complexity 1 22 0 1931 121 7 14 chr2 96372896 96373207 -154314647 + AluSc SINE Alu 1 309 0 262 148 0 33 chr2 96374937 96374998 -154312856 + (TA)n Simple_repeat Simple_repeat 1 59 0 1275 117 80 0 chr2 96375050 96375263 -154312591 + MER30 DNA MER1_type 1 230 0 512 192 142 33 chr2 96375668 96375788 -154312066 - AluSq/x SINE Alu -179 133 1 222 298 39 87 chr2 96376815 96376919 -154310935 + L2 LINE L2 3142 3240 -32 1484 190 68 0 chr2 96377689 96377968 -154309886 + AluSg SINE Alu 1 298 -12 225 217 43 0 chr2 96377968 96378014 -154309840 + polypurine Low_complexity Low_complexity 1 48 0 727 239 0 13 chr2 96379547 96379702 -154308152 - AluJo SINE Alu -39 273 121 211 196 39 0 chr2 96379852 96379903 -154307951 + (TA)n Simple_repeat Simple_repeat 1 53 0 315 294 42 87 chr2 96380004 96380293 -154307561 + L1MEd LINE L1 1224 1499 -4873 327 304 50 50 chr2 96380423 96380584 -154307270 + L1MEd LINE L1 1449 1609 -4775 629 286 115 74 chr2 96380720 96381275 -154306579 - L1MCc LINE L1 -4997 1426 845 1858 128 51 24 chr2 96381275 96381571 -154306283 - AluY SINE Alu -7 304 1 629 286 115 74 chr2 96381571 96381596 -154306258 - L1MCc LINE L1 -5578 845 822 2762 91 5 13 chr2 96381800 96382194 -154305660 + L1PA7 LINE L1 5760 6150 -4 22 35 0 0 chr2 96382316 96382345 -154305509 + AT_rich Low_complexity Low_complexity 1 29 0 355 284 87 38 chr2 96382427 96382716 -154305138 - L1ME3A LINE L1 -164 6006 5704 6318 49 19 0 chr2 96382870 96383708 -154304146 - L1PA4 LINE L1 -1 6154 5301 266 277 123 20 chr2 96383755 96384218 -154303636 - L1ME3A LINE L1 -725 5437 4915 224 340 82 10 chr2 96385785 96385882 -154301972 + L2 LINE L2 3201 3304 -9 2250 65 0 17 chr2 96386043 96386337 -154301517 + AluY SINE Alu 1 289 -22 21 71 0 0 chr2 96386691 96386733 -154301121 + AT_rich Low_complexity Low_complexity 1 42 0 1844 182 46 55 chr2 96386752 96387187 -154300667 + Tigger2a DNA MER2_type 3 433 -1 1888 129 3 30 chr2 96387849 96387974 -154299880 + AluSx SINE Alu 7 134 -178 186 43 0 0 chr2 96387974 96387997 -154299857 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1888 129 3 30 chr2 96387997 96388166 -154299688 + AluSx SINE Alu 134 293 -19 228 35 0 0 chr2 96388827 96388856 -154298998 + (TG)n Simple_repeat Simple_repeat 1 29 0 461 287 38 13 chr2 96389163 96389320 -154298534 + MIR SINE MIR 83 243 -19 195 333 37 0 chr2 96389535 96389589 -154298265 + L2 LINE L2 3132 3187 -85 240 158 0 0 chr2 96390021 96390059 -154297795 + Tigger2 DNA MER2_type 10 47 -2671 2467 66 7 7 chr2 96390066 96390371 -154297483 - AluSp SINE Alu -8 305 1 831 161 7 14 chr2 96390461 96390604 -154297250 + FRAM SINE Alu 22 163 -13 204 40 0 0 chr2 96390980 96391005 -154296849 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 375 261 87 0 chr2 96391398 96391490 -154296364 - MER8 DNA MER2_type -117 122 23 418 258 89 24 chr2 96391863 96392076 -154295778 - L1ME4a LINE L1 0 6121 5895 1538 193 0 11 chr2 96392381 96392666 -154295188 - AluJo SINE Alu -30 282 1 254 229 35 139 chr2 96392941 96393085 -154294769 + MIR SINE MIR 71 199 -63 1904 142 0 23 chr2 96393153 96393503 -154294351 - AluSg SINE Alu 0 310 1 26 30 0 0 chr2 96394030 96394063 -154293791 + AT_rich Low_complexity Low_complexity 1 33 0 22 56 0 0 chr2 96394369 96394405 -154293449 + AT_rich Low_complexity Low_complexity 1 36 0 249 83 0 0 chr2 96394724 96394760 -154293094 + (TAGA)n Simple_repeat Simple_repeat 1 36 0 323 252 24 92 chr2 96394787 96394993 -154292861 - LTR41 LTR ERVL -7 766 575 272 333 31 10 chr2 96395861 96395957 -154291897 + MIR3 SINE MIR 75 172 -36 247 397 7 0 chr2 96396671 96396807 -154291047 - LTR41 LTR ERVL -255 518 382 499 205 43 8 chr2 96396992 96397109 -154290745 - LTR41 LTR ERVL -622 151 31 21 0 0 0 chr2 96397138 96397159 -154290695 + AT_rich Low_complexity Low_complexity 1 21 0 1593 167 34 27 chr2 96397665 96397959 -154289895 - AluSx SINE Alu -16 296 1 198 283 0 38 chr2 96398019 96398072 -154289782 + L2 LINE L2 2997 3047 -225 311 83 0 111 chr2 96398146 96398218 -154289636 - L1PA8 LINE L1 0 6172 6109 780 301 21 8 chr2 96398621 96398857 -154288997 + MIR SINE MIR 21 259 -3 1731 38 0 5 chr2 96398891 96399101 -154288753 - L1PA5 LINE L1 -8 6146 5938 2162 124 0 0 chr2 96399870 96400160 -154287694 + AluSx SINE Alu 1 290 -22 32 57 0 0 chr2 96400161 96400214 -154287640 + AT_rich Low_complexity Low_complexity 1 53 0 2176 116 0 7 chr2 96400590 96400891 -154286963 + AluSx SINE Alu 1 299 -13 2059 126 0 7 chr2 96400938 96401240 -154286614 - AluSg SINE Alu -10 300 1 1997 140 3 16 chr2 96402030 96402338 -154285516 + AluSx SINE Alu 1 304 -8 933 240 51 71 chr2 96402801 96402907 -154284947 - MER2 DNA MER2_type 0 344 237 1982 124 0 11 chr2 96402907 96403189 -154284665 - AluY SINE Alu -32 279 1 933 240 51 71 chr2 96403189 96403432 -154284422 - MER2 DNA MER2_type -107 237 2 610 239 108 15 chr2 96409133 96409401 -154278453 - L1MB7 LINE L1 -13 6171 5879 771 255 106 14 chr2 96411800 96412169 -154275685 + L1MA9 LINE L1 5872 6274 -38 1710 178 3 24 chr2 96412324 96412617 -154275237 + AluJo SINE Alu 1 287 -25 1686 178 0 0 chr2 96413176 96413457 -154274397 + AluSx SINE Alu 24 304 0 517 271 7 0 chr2 96414677 96414821 -154273033 - MER5A DNA MER1_type -40 149 5 330 267 126 86 chr2 96415586 96415841 -154272013 + L1M2 LINE L1 679 943 -5906 2351 68 3 7 chr2 96416270 96416565 -154271289 + AluSp SINE Alu 1 294 -19 1766 148 16 35 chr2 96421066 96421356 -154266498 + AluSx SINE Alu 1 389 0 298 229 0 0 chr2 96421356 96421461 -154266393 + A-rich Low_complexity Low_complexity 1 180 0 744 94 0 0 chr2 96422738 96422844 -154265010 + (TA)n Simple_repeat Simple_repeat 1 106 0 1287 161 31 0 chr2 96422887 96423110 -154264744 + MER30 DNA MER1_type 1 230 0 21 0 0 0 chr2 96423128 96423149 -154264705 + AT_rich Low_complexity Low_complexity 1 21 0 529 223 0 27 chr2 96423535 96423647 -154264207 - FLAM_C SINE Alu -32 111 3 1359 194 82 0 chr2 96425549 96425828 -154262026 + AluSg SINE Alu 1 302 -8 406 177 10 10 chr2 96425829 96425925 -154261929 + GA-rich Low_complexity Low_complexity 1 96 0 463 178 0 0 chr2 96427433 96427506 -154260348 - AluJo/FRAM SINE Alu -39 273 201 246 250 0 0 chr2 96427509 96427553 -154260301 - AluJ/monomer SINE Alu -89 44 1 227 176 39 0 chr2 96427706 96427757 -154260097 + (TA)n Simple_repeat Simple_repeat 2 54 0 23 33 0 0 chr2 96427789 96427819 -154260035 + AT_rich Low_complexity Low_complexity 1 30 0 974 268 143 63 chr2 96428565 96429124 -154258730 - L1MCc LINE L1 -4997 1426 823 2987 58 2 8 chr2 96429328 96429722 -154258132 + L1PA7 LINE L1 5760 6151 -3 26 0 0 0 chr2 96429754 96429780 -154258074 + AT_rich Low_complexity Low_complexity 1 26 0 28 0 0 0 chr2 96429840 96429868 -154257986 + AT_rich Low_complexity Low_complexity 1 28 0 501 326 103 19 chr2 96429961 96430611 -154257243 - L1ME3A LINE L1 -168 5994 5290 22 0 0 0 chr2 96432006 96432028 -154255826 + AT_rich Low_complexity Low_complexity 1 22 0 2079 179 121 6 chr2 96432074 96432581 -154255273 - SATR1 Satellite Satellite -398 565 1 525 213 206 0 chr2 96432662 96432817 -154255037 - SATR1 Satellite Satellite -137 333 147 1348 196 233 22 chr2 96432830 96434052 -154253802 - SATR1 Satellite Satellite -51 1480 1 1433 127 27 14 chr2 96434054 96434275 -154253579 - AluSq SINE Alu -89 224 1 732 215 77 0 chr2 96436177 96436372 -154251482 + MER6B DNA MER2_type 1 210 0 397 235 76 25 chr2 96436475 96436594 -154251260 - MER5B DNA MER1_type -4 174 50 216 0 0 0 chr2 96436594 96436618 -154251236 + (T)n Simple_repeat Simple_repeat 1 24 0 181 133 0 0 chr2 96436618 96436648 -154251206 + MER5B DNA MER1_type 125 154 -24 2223 100 0 52 chr2 96436803 96437133 -154250721 - AluSp SINE Alu 0 313 1 313 236 96 45 chr2 96437133 96437281 -154250573 - HsTC2 DNA Tc2 -112 1786 1628 1401 223 2 67 chr2 96437322 96437502 -154250352 + L1MA4 LINE L1 5770 5960 -340 1811 153 0 4 chr2 96437502 96437783 -154250071 + AluSx SINE Alu 1 280 -32 1401 223 2 67 chr2 96437783 96438020 -154249834 + L1MA4 LINE L1 5960 6160 -140 1883 142 14 3 chr2 96438067 96438363 -154249491 - AluSp SINE Alu -4 309 11 2215 161 101 11 chr2 96438364 96439407 -154248447 - SATR1 Satellite Satellite 0 1137 1 227 236 34 90 chr2 96439413 96439502 -154248352 + LTR2 LTR ERV1 3 86 -363 771 195 0 43 chr2 96439587 96439772 -154248082 + LTR2 LTR ERV1 266 442 -7 479 122 0 0 chr2 96439783 96439857 -154247997 - tRNA-Glu-GAG tRNA tRNA 0 75 2 3034 121 7 0 chr2 96439858 96440305 -154247549 + HERVE LTR ERV1 647 1096 -6717 300 250 46 19 chr2 96440534 96440642 -154247212 - HAL1 LINE L1 -1384 1123 1013 1513 193 21 7 chr2 96440688 96440999 -154246855 - AluJo SINE Alu 0 315 1 679 185 31 8 chr2 96441034 96441164 -154246690 - FLAM_C SINE Alu 0 133 1 1225 234 100 61 chr2 96441260 96441700 -154246154 - MLT1C LTR MaLR -2 465 9 250 261 9 18 chr2 96442031 96442142 -154245712 + T-rich Low_complexity Low_complexity 3 112 0 21 36 0 0 chr2 96442177 96442205 -154245649 + AT_rich Low_complexity Low_complexity 1 28 0 1741 173 7 11 chr2 96442671 96442978 -154244876 - AluSx SINE Alu 0 307 2 23 0 0 0 chr2 96442988 96443011 -154244843 + AT_rich Low_complexity Low_complexity 1 23 0 369 159 56 75 chr2 96443954 96444061 -154243793 - MLT2B1 LTR ERVL -311 209 105 293 313 176 14 chr2 96444776 96445054 -154242800 + L2 LINE L2 2068 2390 -924 22 56 0 0 chr2 96445318 96445354 -154242500 + AT_rich Low_complexity Low_complexity 1 36 0 2323 62 0 32 chr2 96445945 96446254 -154241600 - AluY SINE Alu -12 299 1 229 254 0 17 chr2 96446804 96446863 -154240991 + (TA)n Simple_repeat Simple_repeat 1 58 0 469 277 45 9 chr2 96447160 96447380 -154240474 - L1MCa LINE L1 -3654 2772 2545 354 254 56 78 chr2 96447406 96447548 -154240306 - L1MCa LINE L1 -4519 1907 1769 2803 232 36 64 chr2 96447572 96448725 -154239129 - L1MCa LINE L1 -2515 3911 2792 943 269 22 112 chr2 96448729 96449401 -154238453 - L1MCa LINE L1 -5750 857 246 1261 199 146 15 chr2 96449888 96450155 -154237699 - AluJb SINE Alu 0 302 1 24 0 0 0 chr2 96450986 96451010 -154236844 + AT_rich Low_complexity Low_complexity 1 24 0 278 366 9 18 chr2 96452509 96452621 -154235233 + L2 LINE L2 3142 3252 -20 4223 167 18 16 chr2 96453160 96453955 -154233899 + L1PA15 LINE L1 5352 6147 -18 34 42 0 0 chr2 96455243 96455291 -154232563 + AT_rich Low_complexity Low_complexity 1 48 0 3430 204 29 66 chr2 96455519 96456525 -154231329 + LTR5 LTR ERVK 1 969 0 22 0 0 0 chr2 96457587 96457609 -154230245 + AT_rich Low_complexity Low_complexity 1 22 0 1583 202 40 12 chr2 96457652 96458181 -154229673 + LTR26 LTR ERV1 1 603 0 624 251 26 26 chr2 96458181 96458375 -154229479 + MER115 DNA AcHobo 500 693 0 4751 96 3 6 chr2 96458379 96459054 -154228800 + L1PA8 LINE L1 5487 6159 -13 864 210 15 15 chr2 96459836 96460031 -154227823 + Tigger7 DNA MER2_type 575 769 -1718 606 144 0 0 chr2 96460032 96460129 -154227725 + Tigger7 DNA MER2_type 2218 2314 -273 1097 229 16 25 chr2 96460374 96460618 -154227236 + AluJo SINE Alu 13 254 -58 338 86 17 35 chr2 96461821 96461879 -154225975 - MLT2B1 LTR ERVL 0 520 464 240 71 0 0 chr2 96461902 96461944 -154225910 - LTR66 LTR ERVL -175 435 394 1233 170 18 0 chr2 96461970 96462188 -154225666 + Tigger3(Golem) DNA MER2_type 2816 3037 0 374 265 22 0 chr2 96462188 96462318 -154225536 - MLT2B3 LTR ERVL -46 508 381 * 1072 177 38 42 chr2 96462309 96462546 -154225308 - MLT2B3 LTR ERVL -314 240 5 230 170 128 43 chr2 96464855 96464949 -154222905 - L1MC4 LINE L1 -1341 6701 6600 205 140 0 40 chr2 96464949 96464999 -154222855 + (TA)n Simple_repeat Simple_repeat 2 49 0 216 375 42 17 chr2 96464999 96465119 -154222735 - L2 LINE L2 -341 2973 2851 21 0 0 0 chr2 96466940 96466961 -154220893 + AT_rich Low_complexity Low_complexity 1 21 0 436 285 160 30 chr2 96469697 96470207 -154217647 + L1ME3A LINE L1 4915 5357 -813 6855 38 9 1 chr2 96470207 96471051 -154216803 + L1PA4 LINE L1 5305 6155 0 436 285 160 30 chr2 96471051 96471498 -154216356 + L1ME3A LINE L1 5357 6006 -164 2842 91 5 13 chr2 96471727 96472123 -154215731 - L1PA7 LINE L1 -4 6150 5758 746 284 131 71 chr2 96472291 96472351 -154215503 + L1MCc LINE L1 789 844 -5579 2009 94 50 30 chr2 96472351 96472649 -154215205 + AluY SINE Alu 1 304 -7 746 284 131 71 chr2 96472649 96473190 -154214664 + L1MCc LINE L1 844 1426 -4997 336 279 41 86 chr2 96473615 96473905 -154213949 - L1MEd LINE L1 -4872 1247 971 30 0 0 0 chr2 96473946 96473976 -154213878 + AT_rich Low_complexity Low_complexity 1 30 0 729 239 0 13 chr2 96474207 96474362 -154213492 + AluJo SINE Alu 121 273 -39 203 189 0 0 chr2 96474506 96474543 -154213311 + A-rich Low_complexity Low_complexity 1 37 0 225 217 43 0 chr2 96475893 96475939 -154211915 + polypyrimidine Low_complexity Low_complexity 1 48 0 1482 183 68 0 chr2 96475939 96476218 -154211636 - AluSg SINE Alu -12 298 1 224 220 0 0 chr2 96477770 96477820 -154210034 + (TG)n Simple_repeat Simple_repeat 1 50 0 6710 77 52 5 chr2 96477999 96478951 -154208903 - L1PA7 LINE L1 -12 6142 5182 6696 100 15 50 chr2 96478952 96479804 -154208050 + L1P LINE L1 4123 4930 -1216 8134 9 0 0 chr2 96479804 96481243 -154206611 + L1PA2 LINE L1 4711 6154 -1 6696 100 15 50 chr2 96481243 96481476 -154206378 + L1P LINE L1 4930 5170 -976 348 64 0 0 chr2 96482351 96482398 -154205456 + (TG)n Simple_repeat Simple_repeat 2 48 0 22 35 0 0 chr2 96483784 96483813 -154204041 + AT_rich Low_complexity Low_complexity 1 29 0 19910 30 1 0 chr2 96484075 96486439 -154201415 - L1PA2 LINE L1 -1913 4233 1868 10026 24 0 1 chr2 96486430 96488325 -154199529 + L1PA2 LINE L1 4216 6108 -47 * 193 25 0 100 chr2 96489143 96489183 -154198671 + (CCCCCA)n Simple_repeat Simple_repeat 1 36 0 295 203 5 104 chr2 96489200 96489392 -154198462 + C-rich Low_complexity Low_complexity 3 175 0 237 227 0 0 chr2 96490834 96490878 -154196976 + MIR3 SINE MIR 142 185 -23 2101 116 7 3 chr2 96491792 96492095 -154195759 - AluSg SINE Alu -6 304 1 206 341 67 0 chr2 96492131 96492266 -154195588 - L3 LINE CR1 -125 1452 1309 328 257 15 88 chr2 96492726 96492862 -154194992 + L2 LINE L2 3146 3271 -1 1357 160 41 117 chr2 96493214 96493608 -154194246 + MLT1A1 LTR MaLR 1 364 -1 2541 201 23 65 chr2 96494605 96495246 -154192608 - MER90 LTR ERV1 0 614 1 387 302 16 32 chr2 96495349 96495661 -154192193 + L1M LINE L1 5127 5427 -745 810 265 16 9 chr2 96495663 96495997 -154191857 - L1MDa LINE L1 -3666 2874 2541 9592 52 0 2 chr2 96496042 96497993 -154189861 - L1PA5 LINE L1 -7 6147 4203 11157 84 8 17 chr2 96498072 96499044 -154188810 - L1PA5 LINE L1 -3993 2153 1197 2374 104 0 0 chr2 96499044 96499352 -154188502 - AluY SINE Alu -1 310 3 11157 84 8 17 chr2 96499352 96499940 -154187914 - L1PA5 LINE L1 -4949 1197 606 5235 125 59 9 chr2 96499942 96500887 -154186967 - L1PA15 LINE L1 -37 6128 5143 4200 139 111 31 chr2 96500857 96501068 -154186786 - L1MDa LINE L1 -3957 2583 2390 * 1400 241 86 0 chr2 96501068 96501404 -154186450 + MLT1A1 LTR MaLR 1 365 0 4200 139 111 31 chr2 96501404 96502112 -154185742 - L1MDa LINE L1 -4150 2390 1591 219 36 0 0 chr2 96502118 96502146 -154185708 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1444 145 8 37 chr2 96502151 96502392 -154185462 - AluSx SINE Alu -36 276 43 726 119 126 0 chr2 96502421 96502564 -154185290 - L1MCa LINE L1 -4955 1471 1311 1910 145 40 13 chr2 96502565 96502869 -154184985 - 7SLRNA srpRNA srpRNA -1 319 8 1141 181 15 5 chr2 96502874 96503078 -154184776 - AluJb SINE Alu -20 292 87 3752 161 25 18 chr2 96503078 96503786 -154184068 - L1MCa LINE L1 -5110 1316 604 380 234 30 108 chr2 96503836 96504067 -154183787 + L1MC4 LINE L1 7829 8041 -1 926 288 102 10 chr2 96504398 96504693 -154183161 - MLT1I LTR MaLR -2 407 86 209 324 20 10 chr2 96505120 96505222 -154182632 + L3 LINE CR1 1428 1530 -47 1496 150 17 0 chr2 96505332 96505565 -154182289 + Tigger7 DNA MER2_type 432 668 -1819 594 224 0 0 chr2 96505579 96505695 -154182159 + Tigger7 DNA MER2_type 2458 2573 -14 2628 212 22 19 chr2 96505698 96505975 -154181879 - L1ME1 LINE L1 -242 5924 5649 2317 221 70 13 chr2 96505975 96506577 -154181277 - MER92B LTR ERV1 0 636 1 2628 212 22 19 chr2 96506577 96507025 -154180829 - L1ME1 LINE L1 -517 5649 5195 2218 82 51 0 chr2 96507116 96507410 -154180444 - AluY SINE Alu -2 309 1 180 274 129 24 chr2 96508093 96508217 -154179637 + MIR3 SINE MIR 10 146 -62 326 227 23 0 chr2 96508348 96508436 -154179418 + MER96 DNA MER1_type? 1 90 -85 23 0 0 0 chr2 96508499 96508522 -154179332 + GC_rich Low_complexity Low_complexity 1 23 0 285 242 68 0 chr2 96509082 96509204 -154178650 + MIR SINE MIR 58 191 -61 451 201 63 101 chr2 96509540 96509688 -154178166 + MIR SINE MIR 47 188 -74 2444 69 3 0 chr2 96509688 96509991 -154177863 + AluY SINE Alu 1 304 -7 451 201 63 101 chr2 96509991 96510031 -154177823 + MIR SINE MIR 188 228 -34 1923 125 26 10 chr2 96510467 96510772 -154177082 - AluSq SINE Alu -3 310 1 273 256 163 0 chr2 96510887 96510973 -154176881 - L2 LINE L2 0 3272 3173 221 273 124 41 chr2 96512134 96512255 -154175599 - MIR3 SINE MIR -27 181 51 269 245 185 69 chr2 96512612 96512828 -154175026 + L1MC4a LINE L1 5723 5963 -1845 436 273 145 69 chr2 96513678 96513918 -154173936 - L1ME4a LINE L1 -207 5914 5629 2412 99 0 0 chr2 96513918 96514221 -154173633 - AluSc SINE Alu -6 303 1 436 273 145 69 chr2 96514221 96514386 -154173468 - L1ME4a LINE L1 -492 5629 5478 335 254 167 72 chr2 96514395 96514796 -154173058 - L1MC4 LINE L1 0 8042 7604 694 217 133 30 chr2 96514796 96514826 -154173028 - MER58A DNA MER1_type -2196 224 198 2392 115 19 25 chr2 96514826 96515192 -154172662 - THE1B LTR MaLR 0 364 1 694 217 133 30 chr2 96515192 96515364 -154172490 - MER58A DNA MER1_type -2222 198 1 1193 256 154 24 chr2 96515379 96515751 -154172103 - L1MC4 LINE L1 -470 7572 7250 2102 123 14 3 chr2 96515751 96516044 -154171810 - AluSx SINE Alu -16 296 1 1193 256 154 24 chr2 96516044 96516109 -154171745 - L1MC4 LINE L1 -792 7250 7195 2399 94 0 0 chr2 96516109 96516407 -154171447 + AluY SINE Alu 1 298 -13 1193 256 154 24 chr2 96516407 96516688 -154171166 - L1MC4 LINE L1 -847 7195 6699 260 182 62 25 chr2 96516743 96516848 -154171006 - L1ME4a LINE L1 -691 5430 5326 298 118 20 0 chr2 96516872 96516923 -154170931 + MIR SINE MIR 186 237 -25 1720 172 7 17 chr2 96518532 96518834 -154169020 - AluJo SINE Alu -13 299 1 359 123 0 0 chr2 96522419 96522476 -154165378 - AluJ/FLAM SINE Alu -245 57 1 6750 90 8 24 chr2 96522476 96523497 -154164357 + L1PA12 LINE L1 4255 5253 -915 2244 119 0 0 chr2 96523497 96523807 -154164047 + AluSx SINE Alu 1 310 -2 6750 90 8 24 chr2 96523807 96524709 -154163145 + L1PA12 LINE L1 5253 6168 0 651 319 61 34 chr2 96524766 96525211 -154162643 - MLT1J LTR MaLR -16 495 39 43 20 0 0 chr2 96525211 96525261 -154162593 + AT_rich Low_complexity Low_complexity 1 50 0 915 173 0 0 chr2 96526005 96526155 -154161699 + AluJb SINE Alu 1 150 -162 330 26 0 0 chr2 96526692 96526731 -154161123 + (CA)n Simple_repeat Simple_repeat 2 40 0 183 42 0 0 chr2 96527126 96527150 -154160704 + (T)n Simple_repeat Simple_repeat 1 24 0 252 174 9 4 chr2 96527534 96527590 -154160264 + L1ME LINE L1 5776 5819 -302 8166 140 21 4 chr2 96527611 96528184 -154159670 + L1PA11 LINE L1 4079 4641 -1533 221 57 29 0 chr2 96528184 96528219 -154159635 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 8166 140 21 4 chr2 96528219 96529703 -154158151 + L1PA11 LINE L1 4641 6170 -4 728 225 45 68 chr2 96530617 96530839 -154157015 - MER20 DNA MER1_type 0 219 3 284 170 0 0 chr2 96531269 96531316 -154156538 - L2 LINE L2 0 3313 3267 259 353 73 27 chr2 96531645 96531795 -154156059 + L3b LINE CR1 1411 1567 -16 2130 122 0 0 chr2 96531916 96532202 -154155652 - AluSx SINE Alu -26 286 1 229 111 0 28 chr2 96532563 96532599 -154155255 + MER53 DNA DNA 155 189 0 361 165 24 59 chr2 96532636 96532721 -154155133 - MIR SINE MIR -119 143 62 327 256 50 50 chr2 96534028 96534149 -154153705 - L3b LINE CR1 -283 1300 1180 803 151 0 8 chr2 96534765 96534891 -154152963 + LTR1B LTR ERV1 1 125 -701 * 809 108 0 0 chr2 96534890 96535001 -154152853 - MSTB LTR MaLR -315 111 1 2556 160 131 55 chr2 96535093 96535763 -154152091 + LTR1B LTR ERV1 106 826 0 2303 152 78 2 chr2 96535776 96536172 -154151682 - MSTB LTR MaLR 0 426 1 631 141 0 10 chr2 96536750 96536849 -154151005 + MER4A LTR ERV1 1 98 -566 2969 108 0 7 chr2 96536849 96537256 -154150598 + MER4A LTR ERV1 261 664 0 206 250 0 0 chr2 96537337 96537377 -154150477 + L2 LINE L2 3235 3274 -39 1606 195 34 12 chr2 96537816 96538144 -154149710 - L1MB8 LINE L1 -11 6167 5833 750 184 7 0 chr2 96538148 96538284 -154149570 - L1MB8 LINE L1 -420 5754 5618 506 188 0 0 chr2 96538284 96538369 -154149485 + MSTA LTR MaLR 344 428 0 2720 151 9 3 chr2 96538369 96538874 -154148980 + MSTA-int LTR MaLR 1 507 -1144 247 269 48 14 chr2 96539140 96539285 -154148569 + L1M4 LINE L1 3583 3732 -2414 329 250 0 6 chr2 96539320 96539488 -154148366 + (TA)n Simple_repeat Simple_repeat 1 167 0 21 81 0 0 chr2 96539661 96539698 -154148156 + AT_rich Low_complexity Low_complexity 1 37 0 335 222 0 49 chr2 96539701 96539782 -154148072 - FAM SINE Alu 0 179 103 402 220 28 35 chr2 96540101 96540242 -154147612 - L1ME1 LINE L1 -3 6163 6024 232 325 0 8 chr2 96540872 96540992 -154146862 + (TA)n Simple_repeat Simple_repeat 2 120 0 34 24 0 0 chr2 96541023 96541064 -154146790 + AT_rich Low_complexity Low_complexity 1 41 0 856 174 0 0 chr2 96541716 96541854 -154146000 - AluSq SINE Alu -33 280 143 239 258 34 56 chr2 96542356 96542445 -154145409 + MLT2E LTR ERVL 45 131 -497 526 299 113 17 chr2 96545011 96545366 -154142488 + LTR16C LTR ERVL 69 457 -34 287 239 138 77 chr2 96546080 96546210 -154141644 + MIR SINE MIR 48 141 -67 839 291 138 35 chr2 96546522 96546973 -154140881 - MLT1D LTR MaLR 0 505 9 223 186 23 0 chr2 96547027 96547070 -154140784 + CT-rich Low_complexity Low_complexity 2 45 0 256 274 0 0 chr2 96547516 96547589 -154140265 + MER41B LTR ERV1 159 231 -404 740 224 81 120 chr2 96548335 96548590 -154139264 - MLT1A2 LTR MaLR -6 368 131 2341 86 0 0 chr2 96548590 96548915 -154138939 + AluY SINE Alu 2 311 0 740 224 81 120 chr2 96548915 96549042 -154138812 - MLT1A2 LTR MaLR -243 131 1 26 0 0 0 chr2 96550935 96550961 -154136893 + AT_rich Low_complexity Low_complexity 1 26 0 881 30 0 0 chr2 96550961 96551062 -154136792 - L1PA4 LINE L1 -3 6152 6052 3099 50 0 0 chr2 96551062 96551441 -154136413 + L1PA4 LINE L1 5680 6058 -97 1906 131 7 10 chr2 96555436 96555727 -154132127 + AluSx SINE Alu 1 290 -22 325 294 0 0 chr2 96555727 96555812 -154132042 - L1MC4 LINE L1 -1341 6701 6614 1505 212 0 16 chr2 96556079 96556385 -154131469 + AluJb SINE Alu 5 305 -7 432 281 90 43 chr2 96557723 96557993 -154129861 - L1ME3 LINE L1 0 6162 5878 699 290 55 25 chr2 96558001 96558405 -154129449 - L1MEc LINE L1 -4598 1965 1550 30 45 0 0 chr2 96558419 96558463 -154129391 + AT_rich Low_complexity Low_complexity 1 44 0 473 281 118 30 chr2 96559591 96559794 -154128060 + MLT1G1 LTR MaLR 10 230 -365 880 276 42 46 chr2 96560197 96560631 -154127223 + L1M4 LINE L1 4449 4880 -1266 1224 231 21 50 chr2 96560631 96560999 -154126855 - MLT1A1 LTR MaLR 0 457 1 443 280 32 44 chr2 96561030 96561280 -154126574 + L1M4 LINE L1 4910 5156 -990 1729 103 0 0 chr2 96562515 96562739 -154125115 + AluSq SINE Alu 1 224 -89 312 296 56 49 chr2 96562746 96562908 -154124946 - L1MEc LINE L1 -4773 1611 1449 30 0 0 0 chr2 96563372 96563402 -154124452 + AT_rich Low_complexity Low_complexity 1 30 0 766 245 0 13 chr2 96563632 96563787 -154124067 + AluJo SINE Alu 121 273 -39 193 0 94 0 chr2 96565322 96565354 -154122500 + T-rich Low_complexity Low_complexity 5 39 0 1435 194 68 0 chr2 96565368 96565647 -154122207 - AluSg SINE Alu -12 298 1 202 365 31 10 chr2 96566422 96566518 -154121336 - L2 LINE L2 -33 3280 3183 511 198 117 36 chr2 96567549 96567660 -154120194 + AluSq/x SINE Alu 6 125 -187 1444 131 41 0 chr2 96568071 96568292 -154119562 - MER30 DNA MER1_type 0 230 1 558 83 10 21 chr2 96568342 96568438 -154119416 + (TA)n Simple_repeat Simple_repeat 2 96 0 22 0 0 0 chr2 96569654 96569676 -154118178 + AT_rich Low_complexity Low_complexity 1 22 0 1971 121 7 11 chr2 96570166 96570476 -154117378 - AluSc SINE Alu 0 309 1 495 217 13 86 chr2 96570476 96570628 -154117226 - FLAM_C SINE Alu -2 141 1 2022 94 3 53 chr2 96570698 96571018 -154116836 - AluY SINE Alu -7 304 1 268 286 51 31 chr2 96572334 96572432 -154115422 - L2 LINE L2 -33 3280 3181 1745 155 7 30 chr2 96574892 96575196 -154112658 - AluSx SINE Alu -11 301 5 212 240 0 0 chr2 96575377 96575427 -154112427 + (TG)n Simple_repeat Simple_repeat 1 50 0 721 209 34 0 chr2 96577953 96578101 -154109753 - Tigger3(Golem) DNA MER2_type 0 3029 2877 203 203 62 0 chr2 96578336 96578400 -154109454 + A-rich Low_complexity Low_complexity 4 71 0 252 309 12 24 chr2 96578420 96578504 -154109350 + HERV16 LTR ERVL 2059 2141 -2855 350 283 0 44 chr2 96578507 96578620 -154109234 - MLT1G3 LTR MaLR -239 291 184 224 271 17 0 chr2 96580289 96580348 -154107506 + MIR SINE MIR 3 62 -200 282 29 0 0 chr2 96580477 96580512 -154107342 + (TG)n Simple_repeat Simple_repeat 2 36 0 * 405 0 0 0 chr2 96580511 96580556 -154107298 + (TA)n Simple_repeat Simple_repeat 2 46 0 559 291 80 33 chr2 96580755 96581243 -154106611 - L1M4 LINE L1 -1980 4166 3656 759 223 0 6 chr2 96581277 96581434 -154106420 + FRAM SINE Alu 20 175 -1 387 268 127 53 chr2 96581445 96581872 -154105982 - L1M4 LINE L1 -2515 3631 3132 2225 120 0 7 chr2 96581872 96582171 -154105683 + AluSx SINE Alu 5 301 -11 387 268 127 53 chr2 96582171 96582436 -154105418 - L1M4 LINE L1 -3014 3132 2888 2320 120 6 3 chr2 96582474 96582832 -154105022 - L1PA13 LINE L1 -4 6159 5801 361 180 102 54 chr2 96582837 96582973 -154104881 - Charlie5 DNA MER1_type -45 2579 2432 1360 198 20 13 chr2 96582973 96583276 -154104578 - AluJb SINE Alu -7 305 1 361 180 102 54 chr2 96583276 96583306 -154104548 - Charlie5 DNA MER1_type -192 2432 2405 241 359 13 32 chr2 96583428 96583584 -154104270 - L2 LINE L2 -2409 905 753 256 356 52 54 chr2 96584059 96584174 -154103680 - L2 LINE L2 -209 3104 2990 486 33 0 0 chr2 96584174 96584234 -154103620 + (TG)n Simple_repeat Simple_repeat 1 60 0 256 356 52 54 chr2 96584234 96584434 -154103420 - L2 LINE L2 -323 2990 2793 205 250 0 48 chr2 96586032 96586116 -154101738 + GA-rich Low_complexity Low_complexity 2 81 0 318 148 0 0 chr2 96586271 96586325 -154101529 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 1756 165 42 45 chr2 96586411 96586792 -154101062 + LTR1 LTR ERV1 242 621 -164 29 0 0 0 chr2 96587183 96587212 -154100642 + AT_rich Low_complexity Low_complexity 1 29 0 535 248 0 0 chr2 96587241 96587358 -154100496 - FLAM_A SINE Alu -16 117 1 2008 189 52 40 chr2 96587697 96588173 -154099681 + MER66B LTR ERV1 3 484 -2 203 267 0 70 chr2 96588240 96588326 -154099528 - MIR SINE MIR -11 251 172 3035 119 332 2 chr2 96588483 96589104 -154098750 - LTR12 LTR ERV1 0 826 1 637 250 98 43 chr2 96589290 96589566 -154098288 - pTR5 LTR ERV1 -1410 1028 738 35 0 0 0 chr2 96589617 96589652 -154098202 + AT_rich Low_complexity Low_complexity 1 35 0 1519 206 24 14 chr2 96589894 96590186 -154097668 + AluJo SINE Alu 1 295 -17 531 267 0 34 chr2 96591246 96591436 -154096418 - FLAM_C SINE Alu 0 143 2 1459 171 17 0 chr2 96592604 96592868 -154094986 + AluSx SINE Alu 39 306 0 360 0 0 0 chr2 96593163 96593203 -154094651 + (TG)n Simple_repeat Simple_repeat 1 40 0 970 235 176 19 chr2 96593262 96593687 -154094167 - LTR54B LTR ERV1 -6 492 1 1686 141 17 17 chr2 96595520 96595811 -154092043 + AluSx SINE Alu 1 291 -21 1588 192 10 29 chr2 96597204 96597516 -154090338 + AluJo SINE Alu 1 306 -6 370 229 102 59 chr2 96597818 96598073 -154089781 - L1MC/D LINE L1 -497 5624 5354 782 133 0 80 chr2 96598147 96598297 -154089557 - FLAM_C SINE Alu 0 143 6 1439 147 4 20 chr2 96598298 96598363 -154089491 + AluJo SINE Alu 72 137 -175 2321 89 7 7 chr2 96598363 96598665 -154089189 + AluSq SINE Alu 1 302 -11 1439 147 4 20 chr2 96598665 96598837 -154089017 + AluJo SINE Alu 137 307 -5 2550 77 0 0 chr2 96598837 96599148 -154088706 + AluY SINE Alu 1 311 0 2498 67 3 0 chr2 96599161 96599459 -154088395 + AluSp SINE Alu 5 303 -10 356 111 19 0 chr2 96599462 96599516 -154088338 + L1MB7 LINE L1 5325 5379 -804 690 167 79 0 chr2 96599519 96599633 -154088221 + AluSq/x SINE Alu 5 127 -185 3463 178 56 34 chr2 96599650 96599780 -154088074 + L1MB7 LINE L1 5366 5492 -692 1705 177 3 23 chr2 96599780 96600085 -154087769 + AluJb SINE Alu 6 304 -8 3463 178 56 34 chr2 96600085 96600510 -154087344 + L1MB7 LINE L1 5492 5945 -239 1657 153 73 10 chr2 96600510 96600798 -154087056 - AluJb SINE Alu -3 309 4 3463 178 56 34 chr2 96600798 96600987 -154086867 + L1MB7 LINE L1 5945 6128 -56 250 381 32 0 chr2 96601088 96601214 -154086640 + L2 LINE L2 3124 3253 -19 2498 70 0 0 chr2 96601497 96601798 -154086056 + AluY SINE Alu 1 301 -10 2226 117 0 7 chr2 96602152 96602451 -154085403 + AluSx SINE Alu 1 297 -15 2854 60 6 6 chr2 96602453 96602819 -154085035 + L1PA8 LINE L1 5806 6171 -1 1238 162 86 116 chr2 96603014 96603317 -154084537 + AluJo SINE Alu 1 294 -18 658 109 30 0 chr2 96603417 96603518 -154084336 - FLAM_C SINE Alu -37 106 3 640 231 0 0 chr2 96603523 96603657 -154084197 - FRAM SINE Alu -16 160 27 2282 106 3 3 chr2 96604567 96604879 -154082975 - AluSx SINE Alu 0 312 1 2034 120 3 3 chr2 96604896 96605203 -154082651 - AluSp SINE Alu 0 307 1 2251 75 6 31 chr2 96605238 96605557 -154082297 - AluY SINE Alu 0 311 1 1347 51 13 0 chr2 96605558 96605716 -154082138 - AluSp SINE Alu -36 277 118 963 43 0 9 chr2 96605788 96605903 -154081951 - AluSc SINE Alu -195 114 1 2306 76 0 3 chr2 96606023 96606314 -154081540 + AluY SINE Alu 1 290 -21 2019 142 7 0 chr2 96606430 96606732 -154081122 + AluSg SINE Alu 1 304 -6 229 320 10 29 chr2 96607242 96607345 -154080509 + L2 LINE L2 2932 3032 -240 293 285 48 21 chr2 96607888 96608025 -154079829 + MIR SINE MIR 2 144 -64 290 164 0 16 chr2 96608367 96608428 -154079426 + GA-rich Low_complexity Low_complexity 2 61 0 290 225 70 0 chr2 96608742 96608813 -154079041 + MIR SINE MIR 117 192 -70 1930 143 20 0 chr2 96609035 96609329 -154078525 - AluJo SINE Alu -8 304 5 192 276 35 0 chr2 96609739 96609797 -154078057 + L2 LINE L2 3213 3272 0 234 62 0 0 chr2 96609834 96609866 -154077988 + (CA)n Simple_repeat Simple_repeat 1 32 0 * 423 38 0 0 chr2 96609865 96609918 -154077936 + (GA)n Simple_repeat Simple_repeat 2 54 0 978 210 52 20 chr2 96610241 96610287 -154077567 + LTR43 LTR ERV1 176 219 -383 2447 84 0 0 chr2 96610287 96610584 -154077270 + AluSc SINE Alu 1 297 -12 978 210 52 20 chr2 96610584 96610789 -154077065 + LTR43 LTR ERV1 219 435 -167 2302 116 6 0 chr2 96611500 96611811 -154076043 - AluSp SINE Alu 0 313 1 2136 134 134 11 chr2 96612370 96612751 -154075103 + MSTA LTR MaLR 1 428 0 261 293 10 20 chr2 96612766 96612865 -154074989 + LTR43-int LTR ERV1 693 790 -4164 * 1436 218 85 70 chr2 96612845 96612881 -154074973 + LTR43-int LTR ERV1 1784 1818 -2980 2374 57 4 0 chr2 96612881 96613184 -154074670 - AluY SINE Alu 0 304 1 1436 218 85 70 chr2 96613184 96613313 -154074541 + LTR43-int LTR ERV1 1818 1944 -2854 679 142 47 39 chr2 96613313 96613440 -154074414 + FLAM_C SINE Alu 2 129 -4 1436 218 85 70 chr2 96613440 96613741 -154074113 + LTR43-int LTR ERV1 1944 2259 -2539 2518 55 0 3 chr2 96614089 96614382 -154073472 - AluY SINE Alu -19 292 1 839 350 40 4 chr2 96614577 96615057 -154072797 + LTR43-int LTR ERV1 5342 5838 -1918 1163 281 61 50 chr2 96615073 96615795 -154072059 + LTR43-int LTR ERV1 2349 3014 -1784 2613 65 0 0 chr2 96615800 96616108 -154071746 - AluY SINE Alu -3 308 1 604 207 50 14 chr2 96616541 96616681 -154071173 + LTR43-int LTR ERV1 6338 6482 -194 286 265 24 0 chr2 96616746 96616829 -154071025 + LTR43-int LTR ERV1 4713 4797 -1 882 201 77 5 chr2 96617024 96617233 -154070621 + LTR43 LTR ERV1 176 399 -203 342 0 0 0 chr2 96617254 96617292 -154070562 + (TG)n Simple_repeat Simple_repeat 2 39 0 1664 134 3 60 chr2 96617294 96617446 -154070408 - AluJb SINE Alu -30 282 154 2304 84 0 19 chr2 96617446 96617756 -154070098 - AluSx SINE Alu -8 304 1 1664 134 3 60 chr2 96617756 96617902 -154069952 - AluJb SINE Alu -158 154 1 204 184 57 0 chr2 96618368 96618426 -154069428 - MIR SINE MIR -87 175 114 522 264 11 40 chr2 96619559 96619733 -154068121 + MER104 DNA Tc2 6 174 -6 365 297 54 0 chr2 96620204 96620315 -154067539 + L2 LINE L2 3146 3262 -10 1954 115 43 0 chr2 96620388 96620667 -154067187 + AluSg SINE Alu 1 291 -19 1117 176 46 130 chr2 96620667 96620923 -154066931 + L1ME3 LINE L1 5698 5905 -257 1703 164 32 7 chr2 96620923 96621203 -154066651 + AluJb SINE Alu 1 287 -25 1117 176 46 130 chr2 96621203 96621377 -154066477 + L1ME3 LINE L1 5905 6092 -70 273 107 0 71 chr2 96621412 96621468 -154066386 + L1ME3 LINE L1 6079 6130 -32 1529 197 14 7 chr2 96621470 96621764 -154066090 + AluJo SINE Alu 1 296 -16 1879 153 0 32 chr2 96621767 96622080 -154065774 + AluJo SINE Alu 1 303 -9 1911 155 7 0 chr2 96622083 96622373 -154065481 + AluJb SINE Alu 1 292 -20 214 143 0 41 chr2 96622378 96622427 -154065427 + (TA)n Simple_repeat Simple_repeat 1 47 0 1974 161 3 3 chr2 96622563 96622861 -154064993 - AluJb SINE Alu -14 298 1 2308 99 3 10 chr2 96622877 96623191 -154064663 - AluSx SINE Alu -2 310 1 21 57 0 0 chr2 96623193 96623228 -154064626 + AT_rich Low_complexity Low_complexity 1 35 0 373 111 0 0 chr2 96623647 96623701 -154064153 + L1M4 LINE L1 5685 5738 -446 1887 126 11 11 chr2 96623702 96623987 -154063867 + AluSq SINE Alu 1 285 -28 1116 117 7 19 chr2 96623987 96624014 -154063840 + AluSx SINE Alu 1 310 0 2273 95 0 9 chr2 96624049 96624364 -154063490 + AluSx SINE Alu 1 312 0 1331 108 0 0 chr2 96624364 96624549 -154063305 + AluSg/x SINE Alu 126 310 -2 2185 175 3 11 chr2 96625443 96625758 -154062096 - L1PB4 LINE L1 -13 6143 5827 2327 73 3 3 chr2 96625758 96626060 -154061794 - AluY SINE Alu -9 302 1 2185 175 3 11 chr2 96626060 96626110 -154061744 - L1PB4 LINE L1 -329 5827 5779 2235 97 3 3 chr2 96626110 96626409 -154061445 - AluSc SINE Alu -8 301 3 2185 175 3 11 chr2 96626409 96626420 -154061434 - L1PB4 LINE L1 -377 5779 5769 543 158 0 0 chr2 96626420 96626502 -154061352 - AluSx SINE Alu -15 297 216 974 105 0 15 chr2 96626502 96626635 -154061219 - AluSx SINE Alu -178 135 5 2265 180 29 4 chr2 96626639 96627208 -154060646 - L1MC/D LINE L1 -371 5785 5395 2115 116 0 7 chr2 96627210 96627513 -154060341 - AluSx SINE Alu -11 301 1 24 0 0 0 chr2 96627521 96627545 -154060309 + AT_rich Low_complexity Low_complexity 1 24 0 1634 164 3 21 chr2 96627548 96627835 -154060019 - AluJo SINE Alu -25 287 6 248 197 53 13 chr2 96627849 96627925 -154059929 - L1MC/D LINE L1 -739 5431 5353 441 240 64 110 chr2 96627952 96628097 -154059757 - L1MC/D LINE L1 -783 5363 5213 2101 119 20 0 chr2 96628097 96628399 -154059455 - AluSx SINE Alu 0 312 5 441 240 64 110 chr2 96628399 96628421 -154059433 - L1MC/D LINE L1 -933 5213 5192 564 186 10 10 chr2 96628421 96628523 -154059331 - U13 snRNA snRNA -2 102 1 441 240 64 110 chr2 96628523 96628644 -154059210 - L1MC/D LINE L1 -954 5192 5067 1925 83 38 0 chr2 96628644 96628909 -154058945 + AluY SINE Alu 37 311 0 441 240 64 110 chr2 96628909 96628923 -154058931 - L1MC/D LINE L1 -1079 5067 5054 1901 158 3 3 chr2 96628923 96629221 -154058633 + AluJb SINE Alu 1 298 -14 441 240 64 110 chr2 96629221 96629280 -154058574 - L1MC/D LINE L1 -1092 5054 5029 2151 94 30 0 chr2 96629498 96629795 -154058059 + AluSg SINE Alu 5 310 0 468 321 108 14 chr2 96630014 96630291 -154057563 - L1ME LINE L1 -371 5750 5448 222 148 0 0 chr2 96633553 96633607 -154054247 + (TCTCTG)n Simple_repeat Simple_repeat 5 58 0 2326 71 0 3 chr2 96633822 96634118 -154053736 - AluY SINE Alu -16 295 1 1104 97 0 0 chr2 96634119 96634263 -154053591 - AluSq/x SINE Alu -169 144 1 1692 185 3 3 chr2 96634271 96634579 -154053275 - AluJo SINE Alu -4 308 1 203 133 0 0 chr2 96636389 96636419 -154051435 + (GGA)n Simple_repeat Simple_repeat 3 32 0 2289 78 7 0 chr2 96637308 96637604 -154050250 - AluSq SINE Alu -15 298 1 198 287 106 0 chr2 96638908 96639002 -154048852 + L2 LINE L2 3137 3240 -32 1810 209 5 40 chr2 96639190 96639568 -154048286 - MLT1A1 LTR MaLR 0 365 1 311 303 123 8 chr2 96639616 96639738 -154048116 - L2 LINE L2 0 3272 3137 1523 129 71 62 chr2 96640020 96640329 -154047525 - AluSx SINE Alu 0 312 1 1726 162 0 35 chr2 96641080 96641394 -154046460 - AluJo SINE Alu -9 303 1 2183 103 7 0 chr2 96643930 96644231 -154043623 - AluSq SINE Alu -10 303 1 258 56 0 0 chr2 96647051 96647087 -154040767 + (CA)n Simple_repeat Simple_repeat 2 37 0 * 387 41 0 0 chr2 96647086 96647135 -154040719 + (CG)n Simple_repeat Simple_repeat 2 50 0 180 184 0 0 chr2 96653183 96653232 -154034622 + C-rich Low_complexity Low_complexity 1 49 0 317 22 44 0 chr2 96656222 96656267 -154031587 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 185 0 40 0 chr2 96656387 96656412 -154031442 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 255 254 0 0 chr2 96658577 96658640 -154029214 + C-rich Low_complexity Low_complexity 1 63 0 218 234 0 31 chr2 96659079 96659143 -154028711 + CT-rich Low_complexity Low_complexity 1 62 0 207 88 0 0 chr2 96659587 96659621 -154028233 + (T)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr2 96659901 96659925 -154027929 + (T)n Simple_repeat Simple_repeat 1 24 0 1454 143 11 7 chr2 96660598 96660870 -154026984 + AluY SINE Alu 30 302 -9 323 299 81 10 chr2 96660938 96661135 -154026719 - L1ME LINE L1 -317 5804 5594 1586 137 51 27 chr2 96661789 96662082 -154025772 + AluJb SINE Alu 5 304 -8 515 189 0 0 chr2 96662120 96662210 -154025644 + 5S rRNA rRNA 1 90 -31 2142 98 0 41 chr2 96663235 96663405 -154024449 - AluSq SINE Alu -10 303 150 2349 76 0 3 chr2 96663405 96663707 -154024147 - AluY SINE Alu -10 301 1 2142 98 0 41 chr2 96663707 96663852 -154024002 - AluSq SINE Alu -163 150 1 1692 185 3 3 chr2 96663860 96664168 -154023686 - AluJo SINE Alu -4 308 1 203 133 0 0 chr2 96665980 96666010 -154021844 + (GGA)n Simple_repeat Simple_repeat 3 32 0 2210 102 0 0 chr2 96666900 96667195 -154020659 - AluSg SINE Alu -15 295 1 275 270 11 34 chr2 96668953 96669042 -154018812 + MIR SINE MIR 37 123 -139 340 292 133 22 chr2 96670041 96670267 -154017587 - LTR16A LTR ERVL -173 277 27 376 244 31 103 chr2 96670745 96670950 -154016904 + MIR SINE MIR 18 209 -53 2999 107 15 126 chr2 96672522 96673119 -154014735 + L1MB3 LINE L1 5653 6183 0 192 179 0 0 chr2 96673367 96673406 -154014448 + (TG)n Simple_repeat Simple_repeat 2 40 0 245 318 114 15 chr2 96673791 96673923 -154013931 - L2 LINE L2 0 3313 3169 250 197 139 57 chr2 96674083 96674205 -154013649 - Charlie8 DNA MER1_type -2144 273 142 273 227 10 82 chr2 96674361 96674458 -154013396 - MLT1L LTR MaLR -221 394 305 328 328 0 33 chr2 96674548 96674670 -154013184 + LTR67 LTR ERVL 4 121 -436 2308 88 3 0 chr2 96674670 96674975 -154012879 - AluSx SINE Alu -6 306 1 1080 187 116 2 chr2 96675264 96675307 -154012547 + L1MB7 LINE L1 5706 5743 -441 825 140 28 0 chr2 96675307 96675450 -154012404 - L1MB7 LINE L1 -14 6170 6024 1080 187 116 2 chr2 96675450 96675691 -154012163 + L1MB7 LINE L1 5743 6039 -145 * 4048 188 53 13 chr2 96675686 96676241 -154011613 - L1M4 LINE L1 -893 5253 4641 2268 68 0 10 chr2 96676241 96676533 -154011321 + AluY SINE Alu 1 289 -22 4048 188 53 13 chr2 96676533 96676956 -154010898 - L1M4 LINE L1 -1505 4641 4236 213 289 0 0 chr2 96677505 96677557 -154010297 + CT-rich Low_complexity Low_complexity 4 55 0 707 260 37 71 chr2 96678112 96678435 -154009419 - L1ME1 LINE L1 -6 6160 5849 470 270 132 0 chr2 96679036 96679195 -154008659 - MIR SINE MIR 0 262 83 192 263 73 146 chr2 96679246 96679398 -154008456 + L2 LINE L2 2837 2998 -274 204 97 0 0 chr2 96679398 96679429 -154008425 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2214 86 0 0 chr2 96679431 96679721 -154008133 - AluY SINE Alu -21 290 1 2167 102 3 0 chr2 96679721 96680014 -154007840 - AluSx SINE Alu -18 294 1 192 263 73 146 chr2 96680014 96680324 -154007530 + L2 LINE L2 2997 3269 -3 267 270 27 0 chr2 96680650 96680724 -154007130 + MER5B DNA MER1_type 96 171 -7 1848 134 0 26 chr2 96680887 96681192 -154006662 - AluJb SINE Alu -15 297 1 437 266 105 0 chr2 96681290 96681414 -154006440 - MER5B DNA MER1_type -41 137 1 734 226 6 18 chr2 96681576 96681740 -154006114 + MER5B DNA MER1_type 1 162 -16 1313 145 50 5 chr2 96681740 96681863 -154005991 + AluJb SINE Alu 1 140 -172 180 0 0 0 chr2 96681863 96681883 -154005971 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1313 145 50 5 chr2 96681883 96681980 -154005874 + AluJb SINE Alu 140 231 -81 2148 125 0 3 chr2 96682125 96682437 -154005417 + AluSx SINE Alu 1 311 -1 2267 69 3 0 chr2 96682438 96682756 -154005098 + AluY SINE Alu 3 311 0 920 140 136 27 chr2 96682779 96683000 -154004854 - L1MC2 LINE L1 -11 6333 6089 2112 110 0 7 chr2 96683000 96683300 -154004554 + AluSx SINE Alu 1 298 -14 330 299 30 70 chr2 96683517 96683718 -154004136 + MLT1J LTR MaLR 256 448 -63 207 125 0 0 chr2 96683732 96683772 -154004082 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 190 224 151 63 chr2 96684446 96684651 -154003203 + L2 LINE L2 2719 2941 -373 323 324 20 54 chr2 96684696 96684900 -154002954 + L2 LINE L2 3075 3271 -1 2309 93 0 0 chr2 96685662 96685972 -154001882 - AluSg SINE Alu 0 310 1 2327 94 0 7 chr2 96685972 96686279 -154001575 - AluSx SINE Alu -6 306 1 198 287 106 0 chr2 96687582 96687676 -154000178 + L2 LINE L2 3137 3240 -32 1810 209 5 40 chr2 96687864 96688242 -153999612 - MLT1A1 LTR MaLR 0 365 1 311 303 123 8 chr2 96688290 96688412 -153999442 - L2 LINE L2 0 3272 3137 1441 142 71 62 chr2 96688694 96689003 -153998851 - AluSx SINE Alu 0 312 1 1720 162 0 38 chr2 96689755 96690070 -153997784 - AluJo SINE Alu -9 303 1 2183 103 7 0 chr2 96692614 96692915 -153994939 - AluSq SINE Alu -10 303 1 1005 220 164 56 chr2 96694795 96695223 -153992631 + MLT1F LTR MaLR 1 474 -68 4155 115 37 10 chr2 96695601 96695664 -153992190 - MER41B LTR ERV1 0 635 575 2062 117 0 13 chr2 96695664 96695963 -153991891 + AluSx SINE Alu 1 295 -17 1591 120 117 11 chr2 96695963 96696229 -153991625 + AluSg SINE Alu 1 294 -16 4155 115 37 10 chr2 96696229 96696287 -153991567 - MER41B LTR ERV1 -60 575 520 2185 121 0 0 chr2 96696287 96696593 -153991261 + AluSx SINE Alu 1 306 -6 4155 115 37 10 chr2 96696593 96697087 -153990767 - MER41B LTR ERV1 -115 520 1 1201 125 6 0 chr2 96697764 96697940 -153989914 + AluSg/x SINE Alu 121 297 -15 313 232 87 106 chr2 96697953 96698156 -153989698 - L1MC5 LINE L1 -52 7909 7710 1618 169 21 3 chr2 96698156 96698446 -153989408 - AluJb SINE Alu -17 295 1 313 232 87 106 chr2 96698446 96698496 -153989358 - L1MC5 LINE L1 -251 7710 7661 253 304 89 15 chr2 96698518 96698653 -153989201 + L2 LINE L2 2706 2850 -464 419 355 103 27 chr2 96698722 96699023 -153988831 + L2 LINE L2 2989 3312 -1 181 372 93 0 chr2 96699917 96700089 -153987765 + L2 LINE L2 1575 1762 -1552 353 294 40 66 chr2 96700744 96700972 -153986882 + LTR16A LTR ERVL 133 354 -96 1899 82 115 0 chr2 96701986 96702256 -153985598 + AluSx SINE Alu 1 301 -11 288 380 161 19 chr2 96702993 96703309 -153984545 + L3 LINE CR1 427 787 -790 467 350 117 60 chr2 96703443 96703881 -153983973 + L3 LINE CR1 1068 1537 -40 2272 94 10 0 chr2 96703881 96704189 -153983665 - AluSx SINE Alu 0 312 2 467 350 117 60 chr2 96704189 96704230 -153983624 + L3 LINE CR1 1537 1574 -3 540 273 38 99 chr2 96704285 96704513 -153983341 - L1ME3 LINE L1 -2 6160 5964 836 154 0 0 chr2 96704513 96704636 -153983218 - FLAM_C SINE Alu -10 123 1 540 273 38 99 chr2 96704636 96704799 -153983055 - L1ME3 LINE L1 -198 5964 5793 204 40 0 0 chr2 96705493 96705518 -153982336 + (GCCTG)n Simple_repeat Simple_repeat 4 28 0 1209 111 0 32 chr2 96706674 96706864 -153980990 + AluSg/x SINE Alu 127 310 0 2249 74 3 40 chr2 96706870 96707193 -153980661 + AluSp SINE Alu 1 311 -2 452 252 183 41 chr2 96707569 96707888 -153979966 + L2 LINE L2 2919 3292 -21 2270 94 3 0 chr2 96707888 96708187 -153979667 - AluY SINE Alu -11 300 1 452 252 183 41 chr2 96708187 96708212 -153979642 + L2 LINE L2 3292 3312 -1 1735 209 70 36 chr2 96709366 96709810 -153978044 - LTR2B LTR ERV1 0 490 32 629 320 14 38 chr2 96709872 96710211 -153977643 - L1P1 LINE L1 -540 5615 5288 236 203 0 0 chr2 96710349 96710408 -153977446 - L1MC3 LINE L1 -15 7770 7712 1770 185 0 0 chr2 96710626 96710929 -153976925 - AluJo SINE Alu -4 308 6 468 321 108 14 chr2 96712175 96712452 -153975402 + L1ME LINE L1 5448 5750 -371 376 198 132 58 chr2 96712699 96712820 -153975034 - L2 LINE L2 -33 3280 3151 2041 110 0 0 chr2 96712821 96713102 -153974752 + AluSx SINE Alu 1 281 -31 1249 74 0 6 chr2 96714077 96714239 -153973615 - AluSq SINE Alu -152 161 1 322 329 153 6 chr2 96715002 96715172 -153972682 - MIR SINE MIR -48 214 20 204 200 0 0 chr2 96715419 96715479 -153972375 + (TG)n Simple_repeat Simple_repeat 2 61 0 518 206 4 4 chr2 96715497 96715786 -153972068 + (TG)n Simple_repeat Simple_repeat 1 289 0 24 67 0 0 chr2 96716831 96716876 -153970978 + GC_rich Low_complexity Low_complexity 1 45 0 23 33 0 0 chr2 96717099 96717129 -153970725 + GC_rich Low_complexity Low_complexity 1 30 0 1372 170 18 115 chr2 96717517 96717847 -153970007 + AluJo SINE Alu 1 298 -4 2131 92 48 0 chr2 96717848 96718143 -153969711 + AluY SINE Alu 2 310 -1 2099 116 10 0 chr2 96718162 96718456 -153969398 + AluSx SINE Alu 1 297 -15 2087 123 3 3 chr2 96718524 96718832 -153969022 + AluSx SINE Alu 1 308 -4 30 0 0 0 chr2 96719032 96719062 -153968792 + AT_rich Low_complexity Low_complexity 1 30 0 563 263 133 19 chr2 96719730 96720038 -153967816 + L1ME4a LINE L1 5711 6053 -68 249 33 0 0 chr2 96720079 96720109 -153967745 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 1036 152 12 0 chr2 96720109 96720274 -153967580 + FRAM SINE Alu 1 165 -11 415 153 115 128 chr2 96720274 96720509 -153967345 + L1MC5 LINE L1 7702 7933 -28 247 311 89 0 chr2 96720669 96720759 -153967095 + MIR SINE MIR 58 155 -107 2058 130 0 0 chr2 96720874 96721167 -153966687 - AluSx SINE Alu -18 294 2 402 321 82 22 chr2 96723967 96724235 -153963619 + L1MC5 LINE L1 7515 7798 -163 338 260 6 40 chr2 96724433 96724606 -153963248 + G-rich Low_complexity Low_complexity 2 168 0 * 467 199 45 40 chr2 96724435 96724674 -153963180 + (TGGG)n Simple_repeat Simple_repeat 1 240 0 551 118 0 0 chr2 96724797 96724873 -153962981 - AluS SINE Alu -237 76 1 232 73 0 0 chr2 96724903 96724944 -153962910 - Alu SINE Alu 0 302 262 2186 79 13 44 chr2 96726329 96726647 -153961207 - AluSg SINE Alu 0 310 3 2500 50 7 0 chr2 96726654 96726956 -153960898 - AluY SINE Alu -7 304 1 574 106 0 87 chr2 96726961 96727098 -153960756 - AluSp/q SINE Alu 0 313 208 232 71 24 0 chr2 96727199 96727241 -153960613 - Alu SINE Alu -259 43 1 962 125 62 0 chr2 96727275 96727419 -153960435 + AluSx SINE Alu 1 153 -159 1612 106 0 0 chr2 96727421 96727638 -153960216 + AluSg/x SINE Alu 88 304 -8 643 140 0 0 chr2 96727640 96727733 -153960121 - AluJo/FLAM SINE Alu -187 125 33 570 188 30 0 chr2 96729340 96729441 -153958413 + AluJb SINE Alu 195 298 -14 375 210 24 5 chr2 96729444 96729473 -153958381 + L1MA4 LINE L1 5299 5326 -838 2292 86 0 7 chr2 96729473 96729775 -153958079 + AluSc SINE Alu 1 300 -9 375 210 24 5 chr2 96729775 96729882 -153957972 + L1MA4 LINE L1 5326 5443 -721 2033 100 4 7 chr2 96729883 96730164 -153957690 + AluSg SINE Alu 5 284 -26 1001 191 77 0 chr2 96730171 96730444 -153957410 + L1MA4 LINE L1 6005 6298 -2 2162 103 3 3 chr2 96730464 96730764 -153957090 + AluY SINE Alu 1 300 -11 1658 165 37 3 chr2 96730771 96731068 -153956786 + AluJo SINE Alu 6 312 0 1503 233 145 21 chr2 96731154 96731711 -153956143 + L1ME3A LINE L1 5540 6165 -5 1776 177 10 3 chr2 96731801 96732111 -153955743 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 96732639 96732664 -153955190 + GC_rich Low_complexity Low_complexity 1 25 0 22 56 0 0 chr2 96732699 96732735 -153955119 + GC_rich Low_complexity Low_complexity 1 36 0 286 339 124 8 chr2 96735980 96736101 -153951753 + L2 LINE L2 3137 3271 -1 2310 76 36 0 chr2 96736154 96736456 -153951398 - AluSq SINE Alu 0 313 1 1982 121 76 0 chr2 96736457 96736747 -153951107 - AluSx SINE Alu 0 312 1 1014 267 75 50 chr2 96736747 96737163 -153950691 + L2 LINE L2 2888 3313 0 182 237 0 68 chr2 96737345 96737404 -153950450 + MIR SINE MIR 84 138 -124 210 301 0 41 chr2 96738030 96738103 -153949751 + MIR SINE MIR 45 114 -94 1779 124 41 8 chr2 96738170 96738475 -153949379 + AluSx SINE Alu 9 322 0 371 274 95 42 chr2 96738658 96738848 -153949006 - L2 LINE L2 0 3272 3073 913 121 0 0 chr2 96739000 96739124 -153948730 - AluSq/x SINE Alu -189 124 1 824 148 31 0 chr2 96739163 96739291 -153948563 + FLAM_C SINE Alu 1 132 -1 24 32 0 0 chr2 96739314 96739345 -153948509 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr2 96739707 96739728 -153948126 + (T)n Simple_repeat Simple_repeat 1 21 0 6134 31 0 15 chr2 96739732 96740465 -153947389 - SVA Other Other 0 1386 665 270 0 0 0 chr2 96740795 96740825 -153947029 + (CA)n Simple_repeat Simple_repeat 2 31 0 229 217 0 43 chr2 96741475 96741544 -153946310 - L1M4 LINE L1 -887 5259 5194 2228 101 3 3 chr2 96741664 96741971 -153945883 - AluSc SINE Alu -2 307 1 301 233 120 0 chr2 96741977 96742110 -153945744 - L1M4 LINE L1 -1590 4556 4408 429 254 104 46 chr2 96742175 96742299 -153945555 - MER21B LTR ERV1 -125 738 623 928 121 8 0 chr2 96742299 96742431 -153945423 - FLAM_C SINE Alu 0 133 1 429 254 104 46 chr2 96742431 96742546 -153945308 - MER21B LTR ERV1 -240 623 485 1937 115 0 83 chr2 96742549 96742585 -153945269 - AluSx SINE Alu -1 311 274 245 70 47 0 chr2 96742585 96742628 -153945226 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 1937 115 0 83 chr2 96742628 96742842 -153945012 - AluSx SINE Alu -38 274 94 2337 91 0 3 chr2 96742842 96743150 -153944704 - AluY SINE Alu -4 307 1 1937 115 0 83 chr2 96743150 96743237 -153944617 - AluSx SINE Alu -218 94 1 883 175 7 0 chr2 96743239 96743382 -153944472 - FRAM SINE Alu -30 146 3 277 296 68 15 chr2 96743495 96743627 -153944227 - MER21B LTR ERV1 -511 352 214 258 54 0 0 chr2 96743669 96743706 -153944148 - AluJb SINE Alu -196 106 70 811 259 54 46 chr2 96743706 96744030 -153943824 - L1M4 LINE L1 -2085 4061 3732 1599 162 107 0 chr2 96744030 96744302 -153943552 + AluJb SINE Alu 1 301 -11 811 259 54 46 chr2 96744302 96744347 -153943507 - L1M4 LINE L1 -2414 3732 3689 1250 263 46 55 chr2 96744941 96745126 -153942728 + L2 LINE L2 2305 2490 -824 2307 89 6 10 chr2 96745126 96745439 -153942415 - AluSx SINE Alu 0 312 1 1250 263 46 55 chr2 96745439 96745710 -153942144 + L2 LINE L2 2490 2757 -557 2225 112 0 3 chr2 96745710 96746013 -153941841 - AluSx SINE Alu -10 302 1 376 306 33 60 chr2 96746020 96746203 -153941651 - MIR SINE MIR -71 191 14 1165 169 42 34 chr2 96747031 96747268 -153940586 - AluJb SINE Alu -7 305 67 213 39 0 0 chr2 96747488 96747514 -153940340 + (CTG)n Simple_repeat Simple_repeat 1 26 0 345 303 62 0 chr2 96747551 96747696 -153940158 - L1ME LINE L1 -524 5646 5493 2395 46 0 0 chr2 96748365 96748672 -153939182 + AluY SINE Alu 1 307 0 247 209 134 0 chr2 96749203 96749270 -153938584 - L2 LINE L2 -5 3308 3233 2474 48 3 0 chr2 96749301 96749594 -153938260 + AluY SINE Alu 2 295 -16 1643 108 4 9 chr2 96749604 96749835 -153938019 + AluSq SINE Alu 1 230 -83 24 67 0 0 chr2 96749835 96749880 -153937974 + AT_rich Low_complexity Low_complexity 1 45 0 754 139 7 0 chr2 96749911 96750048 -153937806 - L1MB3 LINE L1 -43 6140 6003 2397 62 16 3 chr2 96750230 96750537 -153937317 + AluSx SINE Alu 1 311 -1 467 355 96 30 chr2 96750941 96751307 -153936547 + L2 LINE L2 2919 3308 -5 683 141 8 39 chr2 96751726 96751854 -153936000 + FRAM SINE Alu 48 171 -5 1186 167 142 25 chr2 96751876 96752116 -153935738 + AluJb SINE Alu 9 276 -36 222 260 26 78 chr2 96752274 96752351 -153935503 - L2 LINE L2 0 3272 3200 244 306 269 0 chr2 96752942 96753041 -153934813 - MIR SINE MIR -80 182 111 1906 141 17 0 chr2 96753041 96753331 -153934523 - AluJb SINE Alu -17 295 1 244 306 269 0 chr2 96753331 96753365 -153934489 - MIR SINE MIR -151 111 13 241 164 48 7 chr2 96753613 96753759 -153934095 + (TG)n Simple_repeat Simple_repeat 1 152 0 192 244 0 0 chr2 96753851 96753941 -153933913 + (TG)n Simple_repeat Simple_repeat 1 90 0 610 248 107 15 chr2 96756425 96756631 -153931223 + MIR SINE MIR 38 262 0 934 170 7 0 chr2 96757033 96757186 -153930668 - FRAM SINE Alu -7 169 16 1276 121 21 11 chr2 96757191 96757381 -153930473 - AluJo SINE Alu -120 192 1 2014 132 3 16 chr2 96758497 96758808 -153929046 - AluJo SINE Alu -5 307 1 2161 79 24 3 chr2 96761837 96762129 -153925725 + AluSg SINE Alu 1 298 -12 425 277 47 63 chr2 96762444 96762636 -153925218 - MIR SINE MIR -63 145 1 858 197 174 0 chr2 96766668 96766846 -153921008 + AluJo SINE Alu 85 293 -19 186 309 162 0 chr2 96766938 96767006 -153920848 + MIR SINE MIR 76 154 -108 352 159 72 0 chr2 96767007 96767076 -153920778 - AluJ/FRAM SINE Alu -1 301 228 2077 113 11 0 chr2 96767176 96767459 -153920395 - AluSx SINE Alu -26 286 1 394 294 119 0 chr2 96767503 96767646 -153920208 + MIR SINE MIR 9 168 -94 590 156 8 78 chr2 96767688 96767816 -153920038 - FRAM SINE Alu 0 176 58 27 57 0 29 chr2 96768235 96768281 -153919573 + AT_rich Low_complexity Low_complexity 1 46 -22 2168 124 0 0 chr2 96768281 96768580 -153919274 - AluSx SINE Alu -13 299 1 27 57 0 29 chr2 96768580 96768603 -153919251 + AT_rich Low_complexity Low_complexity 46 68 0 312 330 0 0 chr2 96768765 96768856 -153918998 - MIR SINE MIR 0 262 172 435 282 6 0 chr2 96769160 96769491 -153918363 + (TG)n Simple_repeat Simple_repeat 1 333 0 200 278 7 0 chr2 96769576 96769720 -153918134 + (TG)n Simple_repeat Simple_repeat 1 145 0 378 315 11 6 chr2 96769752 96769930 -153917924 + (TG)n Simple_repeat Simple_repeat 1 179 0 2288 94 0 28 chr2 96770398 96770718 -153917136 - AluSx SINE Alu -1 311 1 207 191 0 0 chr2 96770805 96770852 -153917002 + A-rich Low_complexity Low_complexity 1 47 0 2214 72 34 0 chr2 96772557 96772848 -153915006 - AluSx SINE Alu -10 302 2 2505 41 0 0 chr2 96772881 96773171 -153914683 - AluY SINE Alu -21 290 1 483 159 23 0 chr2 96773273 96773366 -153914488 + MER5A DNA MER1_type 15 98 -80 187 242 8 141 chr2 96773292 96773420 -153914434 - MER5A DNA MER1_type -23 166 56 * 1280 69 0 0 chr2 96773572 96773732 -153914122 + AluY SINE Alu 135 294 -17 2220 74 0 14 chr2 96773742 96774038 -153913816 + AluY SINE Alu 1 292 -19 248 369 24 0 chr2 96774864 96774948 -153912906 + L2 LINE L2 2986 3071 -201 950 292 86 17 chr2 96775016 96775376 -153912478 - L2 LINE L2 0 3313 2929 189 0 0 0 chr2 96778067 96778088 -153909766 + (GGA)n Simple_repeat Simple_repeat 1 21 0 26 0 0 0 chr2 96778197 96778223 -153909631 + AT_rich Low_complexity Low_complexity 1 26 0 1586 174 17 20 chr2 96778922 96779216 -153908638 + AluJo SINE Alu 1 293 -19 2059 121 3 3 chr2 96779876 96780174 -153907680 + AluSx SINE Alu 1 298 -14 559 272 294 8 chr2 96780394 96780433 -153907421 - L2 LINE L2 -808 2506 2479 2168 95 3 3 chr2 96780433 96780729 -153907125 + AluSx SINE Alu 1 296 -16 559 272 294 8 chr2 96780729 96781175 -153906679 - L2 LINE L2 -835 2479 1882 1849 123 29 48 chr2 96781594 96781904 -153905950 + AluSx SINE Alu 1 304 -8 305 338 50 29 chr2 96782185 96782324 -153905530 - L1ME4a LINE L1 0 6121 5980 457 332 40 23 chr2 96782501 96782802 -153905052 - L1ME4a LINE L1 -2051 5757 5452 1491 146 13 0 chr2 96782807 96783040 -153904814 + MER46A DNA MER2_type 1 236 0 2255 119 0 3 chr2 96784045 96784357 -153903497 - AluSx SINE Alu 0 312 2 32 57 0 0 chr2 96787328 96787381 -153900473 + GC_rich Low_complexity Low_complexity 1 53 0 183 42 0 0 chr2 96787537 96787561 -153900293 + (CCCCG)n Simple_repeat Simple_repeat 4 27 0 189 0 0 0 chr2 96788017 96788038 -153899816 + (CCCCAG)n Simple_repeat Simple_repeat 1 21 0 593 223 38 25 chr2 96788139 96788296 -153899558 - L2 LINE L2 -2 3311 3153 256 218 90 0 chr2 96788286 96788364 -153899490 - MIR SINE MIR -59 203 119 * 21 0 0 0 chr2 96789601 96789622 -153898232 + AT_rich Low_complexity Low_complexity 1 21 0 2061 109 7 0 chr2 96789630 96789965 -153897889 + AluSx SINE Alu 6 312 0 202 267 22 0 chr2 96790507 96790552 -153897302 - L2 LINE L2 -38 3234 3189 222 238 109 25 chr2 96791261 96791422 -153896432 + MIR SINE MIR 10 251 -11 1906 145 3 26 chr2 96791466 96791777 -153896077 - AluJb SINE Alu -6 306 3 306 298 12 0 chr2 96792471 96792555 -153895299 + MIR SINE MIR 63 147 -115 734 104 0 0 chr2 96792556 96792662 -153895192 + AluSg/x SINE Alu 201 306 -3 2028 114 22 32 chr2 96792662 96792977 -153894877 + AluSx SINE Alu 1 312 0 2317 86 0 0 chr2 96793003 96793304 -153894550 + AluY SINE Alu 1 301 -10 204 67 0 0 chr2 96793307 96793337 -153894517 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 979 198 0 0 chr2 96793805 96793972 -153893882 + FAM SINE Alu 8 174 -11 260 346 63 0 chr2 96794456 96794583 -153893271 + MIR3 SINE MIR 74 208 0 198 356 111 0 chr2 96794973 96795063 -153892791 - MIR SINE MIR -71 191 92 1368 141 74 112 chr2 96795064 96795204 -153892650 + AluSg SINE Alu 1 145 -165 1982 117 3 3 chr2 96795204 96795540 -153892314 + AluSx SINE Alu 1 336 0 2336 87 0 0 chr2 96795540 96795838 -153892016 + AluSx SINE Alu 1 298 -14 1368 141 74 112 chr2 96795838 96796007 -153891847 + AluSg SINE Alu 143 300 -10 1484 191 23 0 chr2 96796187 96796479 -153891375 + AluJb SINE Alu 21 318 0 2108 118 3 10 chr2 96796479 96796825 -153891029 + AluSx SINE Alu 2 345 0 996 175 6 0 chr2 96797342 96797508 -153890346 - AluJb SINE Alu -11 301 135 2449 73 0 0 chr2 96797702 96798004 -153889850 - AluSp SINE Alu -10 303 2 2217 184 79 18 chr2 96798007 96798512 -153889342 - MLT1F LTR MaLR -6 536 1 2188 110 10 0 chr2 96798586 96798896 -153888958 - AluSp SINE Alu 0 313 1 1106 177 0 10 chr2 96798899 96799091 -153888763 - AluJo SINE Alu -19 293 104 1638 157 11 31 chr2 96800918 96801077 -153886777 - AluJb SINE Alu -21 291 139 2121 90 3 17 chr2 96801077 96801093 -153886761 - AluSx SINE Alu -16 296 281 192 40 0 0 chr2 96801093 96801118 -153886736 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2121 90 3 17 chr2 96801118 96801401 -153886453 - AluSx SINE Alu -31 281 1 1638 157 11 31 chr2 96801401 96801528 -153886326 - AluJb SINE Alu -173 139 11 2121 107 4 0 chr2 96801660 96801998 -153885856 - AluSx SINE Alu 0 339 1 827 169 55 135 chr2 96804035 96804153 -153883701 + AluJo SINE Alu 10 102 -210 2303 64 0 3 chr2 96804153 96804462 -153883392 - AluY SINE Alu 0 308 1 827 169 55 135 chr2 96804462 96804579 -153883275 + AluJo SINE Alu 102 227 -85 468 281 120 0 chr2 96805045 96805237 -153882617 - MLT1K LTR MaLR -342 246 32 337 94 0 16 chr2 96810104 96810168 -153877686 - Alu SINE Alu 0 302 240 1305 164 9 129 chr2 96813097 96813438 -153874416 - AluSx SINE Alu -12 300 1 2492 62 0 0 chr2 96813440 96813744 -153874110 - AluY SINE Alu -7 304 1 989 96 0 0 chr2 96813746 96813871 -153873983 - AluSq/x SINE Alu -172 141 17 228 185 0 0 chr2 96815982 96816036 -153871818 + (TG)n Simple_repeat Simple_repeat 1 54 0 2190 61 37 3 chr2 96817579 96817874 -153869980 + AluY SINE Alu 3 307 -4 589 311 174 22 chr2 96819110 96819587 -153868267 + L2 LINE L2 2510 3062 -251 829 181 83 5 chr2 96819587 96819780 -153868074 + MER20 DNA MER1_type 6 213 -6 2118 95 17 7 chr2 96819837 96820132 -153867722 - AluSg SINE Alu -11 299 2 1670 59 27 14 chr2 96820311 96820574 -153867280 - AluY SINE Alu 0 321 56 2344 71 0 3 chr2 96820585 96820882 -153866972 - AluSc SINE Alu -13 296 1 376 371 48 41 chr2 96820884 96821199 -153866655 - L1MEd LINE L1 -5065 1054 738 1322 100 0 0 chr2 96821401 96821571 -153866283 + AluSq SINE Alu 1 170 -143 401 270 0 0 chr2 96821698 96821787 -153866067 + L2 LINE L2 3225 3313 0 2340 91 0 0 chr2 96822187 96822483 -153865371 - AluSx SINE Alu -16 296 1 439 287 53 27 chr2 96822485 96822673 -153865181 - MIR SINE MIR -67 195 3 304 284 47 7 chr2 96822957 96823105 -153864749 - L1ME4a LINE L1 -4 6117 5964 814 174 0 0 chr2 96823410 96823542 -153864312 - FLAM_C SINE Alu -1 132 1 216 111 0 0 chr2 96823797 96823833 -153864021 + (T)n Simple_repeat Simple_repeat 1 36 0 1377 169 45 103 chr2 96823911 96824092 -153863762 - AluJo SINE Alu 0 312 157 207 0 0 0 chr2 96824092 96824115 -153863739 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1377 169 45 103 chr2 96824115 96824264 -153863590 - AluJo SINE Alu -155 157 1 447 148 178 74 chr2 96824284 96824419 -153863435 - AluJo SINE Alu -163 149 1 279 301 110 110 chr2 96824419 96824737 -153863117 + L2 LINE L2 2889 3209 -63 1754 165 10 3 chr2 96824737 96824872 -153862982 + AluSx SINE Alu 1 134 -178 2294 77 7 0 chr2 96824872 96825169 -153862685 + AluSp SINE Alu 1 299 -14 1754 165 10 3 chr2 96825169 96825330 -153862524 + AluSx SINE Alu 134 299 -13 279 301 110 110 chr2 96825330 96825390 -153862464 + L2 LINE L2 3208 3267 -5 322 143 13 26 chr2 96825652 96825729 -153862125 - L1M4 LINE L1 -475 5945 5870 730 149 114 75 chr2 96825729 96825793 -153862061 - L1M4 LINE L1 -3340 3042 2982 2190 101 3 0 chr2 96825793 96826091 -153861763 + AluY SINE Alu 1 299 -12 730 149 114 75 chr2 96826091 96826254 -153861600 - L1M4 LINE L1 -3400 2982 2806 347 175 24 7 chr2 96826254 96826329 -153861525 + AluS SINE Alu 1 57 -244 322 191 74 0 chr2 96826330 96826408 -153861446 - Tigger7 DNA MER2_type -265 74 4 1375 190 18 0 chr2 96826475 96826759 -153861095 + L1MA4 LINE L1 6009 6297 -3 657 153 7 192 chr2 96826760 96827041 -153860813 - L1MA8 LINE L1 -56 6235 6007 2299 86 0 16 chr2 96827064 96827379 -153860475 - AluSx SINE Alu -2 310 1 816 200 88 40 chr2 96827382 96827776 -153860078 - L1M4 LINE L1 -3725 2657 2283 2410 81 3 0 chr2 96827776 96828086 -153859768 - AluY SINE Alu 0 311 1 816 200 88 40 chr2 96828086 96828152 -153859702 - L1M4 LINE L1 -4099 2283 2222 2017 112 3 11 chr2 96828152 96828468 -153859386 - AluSx SINE Alu 0 314 1 816 200 88 40 chr2 96828468 96828504 -153859350 - L1M4 LINE L1 -4160 2222 2134 305 228 120 0 chr2 96828759 96828851 -153859003 - L2 LINE L2 0 3313 3211 1601 130 11 19 chr2 96828949 96829218 -153858636 - AluSx SINE Alu 0 312 46 1090 100 0 0 chr2 96829218 96829360 -153858494 + AluSg/x SINE Alu 149 293 -19 210 37 0 0 chr2 96830818 96830845 -153857009 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 418 176 7 52 chr2 96830851 96831004 -153856850 + GA-rich Low_complexity Low_complexity 6 151 0 231 339 152 18 chr2 96832407 96832578 -153855276 + L2 LINE L2 3077 3270 -2 1328 214 105 18 chr2 96832638 96832980 -153854874 - MLT1A2 LTR MaLR 0 374 3 239 306 71 12 chr2 96833095 96833180 -153854674 - L2 LINE L2 -179 3093 3004 824 228 42 0 chr2 96834108 96834275 -153853579 + FAM SINE Alu 1 49 0 1754 172 32 12 chr2 96835203 96835560 -153852294 - MLT1A1 LTR MaLR -1 364 1 412 308 28 7 chr2 96835594 96835737 -153852117 - L2 LINE L2 0 3313 3168 793 284 242 29 chr2 96836112 96836435 -153851419 - L2 LINE L2 -590 2724 2471 1580 190 0 13 chr2 96836435 96836735 -153851119 + AluJo SINE Alu 1 296 -16 793 284 242 29 chr2 96836735 96836893 -153850961 - L2 LINE L2 -843 2471 2348 2024 120 0 28 chr2 96836893 96837210 -153850644 + AluSx SINE Alu 1 308 -4 793 284 242 29 chr2 96837210 96837684 -153850170 - L2 LINE L2 -966 2348 1564 1697 150 39 26 chr2 96838006 96838312 -153849542 - AluSx SINE Alu -2 310 1 635 291 79 15 chr2 96838335 96838538 -153849316 - MER58A DNA MER1_type 0 224 9 883 146 0 0 chr2 96839737 96839874 -153847980 - AluSg/x SINE Alu 0 312 176 1961 115 49 0 chr2 96839874 96840162 -153847692 - AluSx SINE Alu -10 302 1 270 0 0 0 chr2 96840855 96840885 -153846969 + (CA)n Simple_repeat Simple_repeat 2 31 0 245 315 28 28 chr2 96841094 96841202 -153846652 + MER5A DNA MER1_type 82 189 0 826 231 15 65 chr2 96842815 96842971 -153844883 - L1MC5 LINE L1 -37 7924 7793 2437 78 0 0 chr2 96842971 96843279 -153844575 - AluSg SINE Alu -2 308 1 826 231 15 65 chr2 96843279 96843459 -153844395 - L1MC5 LINE L1 -168 7793 7605 1365 168 3 28 chr2 96843463 96843748 -153844106 - AluSx SINE Alu 0 312 35 1609 101 0 0 chr2 96843883 96844092 -153843762 - AluSx SINE Alu -103 209 1 24 32 0 0 chr2 96844099 96844130 -153843724 + AT_rich Low_complexity Low_complexity 1 31 0 1024 135 0 70 chr2 96844130 96844330 -153843524 + AluJo SINE Alu 126 311 -1 2179 91 14 0 chr2 96844627 96844913 -153842941 - AluSg SINE Alu -18 292 3 288 242 34 23 chr2 96845381 96845517 -153842337 + L1ME LINE L1 4931 5063 -1083 406 315 19 12 chr2 96845518 96845680 -153842174 + MIR SINE MIR 73 235 -27 234 310 62 41 chr2 96845680 96845825 -153842029 - L1ME LINE L1 -585 5536 5389 2253 54 0 0 chr2 96845976 96846252 -153841602 - AluY SINE Alu -4 307 32 347 314 67 63 chr2 96846280 96846503 -153841351 + L1ME LINE L1 5549 5772 -349 229 143 0 0 chr2 96846614 96846649 -153841205 + U2 snRNA snRNA 1 35 -153 1871 105 0 0 chr2 96846675 96846932 -153840922 + AluSq SINE Alu 1 257 -56 1018 158 0 22 chr2 96847032 96847246 -153840608 + AluJb SINE Alu 117 312 0 364 229 202 0 chr2 96847246 96847355 -153840499 + MER5B DNA MER1_type 48 178 0 2188 97 0 0 chr2 96847359 96847647 -153840207 + AluSx SINE Alu 13 300 -12 930 233 71 5 chr2 96849891 96850101 -153837753 - MER58A DNA MER1_type 0 224 1 605 158 11 0 chr2 96850767 96850862 -153836992 + FLAM_A SINE Alu 30 125 -17 249 284 102 8 chr2 96851161 96851288 -153836566 + MIR SINE MIR 109 247 -15 2129 109 0 23 chr2 96851964 96852268 -153835586 + AluSq SINE Alu 1 297 -16 22 35 0 0 chr2 96852268 96852297 -153835557 + AT_rich Low_complexity Low_complexity 1 29 0 2259 108 0 0 chr2 96853997 96854302 -153833552 + AluSx SINE Alu 1 305 -7 1795 171 7 3 chr2 96855051 96855360 -153832494 + AluJb SINE Alu 1 310 -2 1846 118 0 4 chr2 96855682 96855945 -153831909 - AluSg SINE Alu -48 262 1 192 125 0 0 chr2 96856923 96856955 -153830899 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 1010 208 88 3 chr2 96857279 96857573 -153830281 - MER33 DNA MER1_type -5 319 1 1666 173 3 7 chr2 96858796 96859096 -153828758 + AluJo SINE Alu 1 299 -13 2189 98 0 7 chr2 96859103 96859419 -153828435 + AluSc SINE Alu 1 314 0 2124 129 17 6 chr2 96859436 96859793 -153828061 + MER47A DNA MER2_type 6 366 0 941 95 0 0 chr2 96862855 96862981 -153824873 + FLAM_C SINE Alu 1 126 -17 1748 121 15 0 chr2 96863023 96863288 -153824566 + AluSx SINE Alu 1 269 -43 694 198 0 0 chr2 96865698 96865819 -153822035 - FLAM_A SINE Alu -12 121 1 1455 204 21 50 chr2 96867606 96867891 -153819963 - MLT1C LTR MaLR -7 460 185 2456 61 0 10 chr2 96867891 96868202 -153819652 - AluY SINE Alu -3 308 1 1455 204 21 50 chr2 96868202 96868255 -153819599 - MLT1C LTR MaLR -282 185 132 996 131 25 0 chr2 96868255 96868415 -153819439 - MLT1C LTR MaLR -303 164 1 449 221 144 0 chr2 96871797 96871901 -153815953 + MER5B DNA MER1_type 1 119 -59 2173 243 94 30 chr2 96871974 96872837 -153815017 + L1MD1 LINE L1 4285 5222 -961 1368 186 41 28 chr2 96872837 96872976 -153814878 + AluJb SINE Alu 1 137 -175 2247 93 7 0 chr2 96872976 96873277 -153814577 + AluSp SINE Alu 1 303 -10 1368 186 41 28 chr2 96873277 96873428 -153814426 + AluJb SINE Alu 137 295 -17 2173 243 94 30 chr2 96873428 96873588 -153814266 + L1MD1 LINE L1 5222 5370 -813 2378 211 112 43 chr2 96873597 96873750 -153814104 + L1MD1 LINE L1 5414 5555 -687 2406 54 3 0 chr2 96873750 96874047 -153813807 + AluY SINE Alu 1 298 -13 2378 211 112 43 chr2 96874047 96874658 -153813196 + L1MD1 LINE L1 5555 6231 -11 305 183 33 0 chr2 96874680 96874740 -153813114 + L1MD3 LINE L1 7730 7791 -204 823 230 6 0 chr2 97074785 97074950 -153612904 + AluJo/FRAM SINE Alu 137 302 -10 2136 80 0 4 chr2 97074955 97075231 -153612623 + AluSq SINE Alu 2 276 -37 198 103 0 0 chr2 97075233 97075262 -153612592 + (CA)n Simple_repeat Simple_repeat 2 30 0 2114 177 26 33 chr2 97075275 97075728 -153612126 + L1MB5 LINE L1 5382 5831 -343 420 337 6 18 chr2 97076075 97076241 -153611613 + CT-rich Low_complexity Low_complexity 1 164 0 2243 100 0 0 chr2 97076399 97076698 -153611156 - AluSq SINE Alu -14 299 1 880 277 152 25 chr2 97076713 97077124 -153610730 - MLT1G1 LTR MaLR -138 452 1 1331 164 35 74 chr2 97077166 97077476 -153610378 + AluJo SINE Alu 1 298 -14 1548 179 7 18 chr2 97077646 97077931 -153609923 + AluJo SINE Alu 14 295 -17 833 293 64 20 chr2 97077966 97078101 -153609753 + L1MEc LINE L1 2030 2158 -4057 2118 120 3 0 chr2 97078101 97078400 -153609454 + AluSx SINE Alu 1 300 -12 833 293 64 20 chr2 97078400 97078447 -153609407 + L1MEc LINE L1 2158 2201 -4014 2081 124 0 16 chr2 97078447 97078753 -153609101 + AluSx SINE Alu 1 301 -11 833 293 64 20 chr2 97078753 97079191 -153608663 + L1MEc LINE L1 2201 2618 -3597 410 244 46 26 chr2 97079837 97079969 -153607885 - MLT1J LTR MaLR -308 203 102 1857 190 63 24 chr2 97080302 97080681 -153607173 + MSTD LTR MaLR 1 394 -2 485 259 146 27 chr2 97081191 97081376 -153606478 - MIR SINE MIR -36 226 20 1852 126 6 58 chr2 97081649 97081975 -153605879 + AluSx SINE Alu 1 309 -3 520 128 0 26 chr2 97081981 97082098 -153605756 + (GGAA)n Simple_repeat Simple_repeat 1 114 0 392 264 176 0 chr2 97082675 97082834 -153605020 - MIR SINE MIR -12 250 64 375 265 0 0 chr2 97083310 97083393 -153604461 + MIR SINE MIR 65 147 -61 1598 181 48 7 chr2 97083972 97084264 -153603590 + AluJo SINE Alu 1 304 -8 978 153 66 6 chr2 97085313 97085496 -153602358 - MER30 DNA MER1_type 0 230 37 1360 170 0 0 chr2 97086003 97086233 -153601621 + AluJo SINE Alu 75 304 -8 1085 209 27 19 chr2 97086251 97086514 -153601340 + MER92B LTR ERV1 371 635 -1 1426 220 73 65 chr2 97086746 97086848 -153601006 - MER31-int LTR ERV1 -1867 3069 2969 2053 86 58 0 chr2 97086848 97087126 -153600728 + AluSg SINE Alu 8 301 -9 2141 121 0 0 chr2 97087126 97087423 -153600431 + AluSg SINE Alu 1 297 -13 1426 220 73 65 chr2 97087423 97087446 -153600408 - MER31-int LTR ERV1 -1967 2969 2948 2709 134 84 32 chr2 97087446 97087908 -153599946 - MER66B LTR ERV1 0 486 1 1426 220 73 65 chr2 97087908 97088330 -153599524 - MER31-int LTR ERV1 -1988 2948 2516 2052 107 0 7 chr2 97088330 97088661 -153599193 + AluSc SINE Alu 1 329 0 407 301 65 69 chr2 97088762 97089008 -153598846 - LTR67 LTR ERVL -280 277 33 189 0 0 0 chr2 97089567 97089588 -153598266 + (CA)n Simple_repeat Simple_repeat 1 21 0 28 48 0 0 chr2 97090717 97090759 -153597095 + AT_rich Low_complexity Low_complexity 1 42 0 406 178 0 0 chr2 97090761 97090834 -153597020 + Tigger2 DNA MER2_type 1 73 -2645 778 242 0 11 chr2 97090867 97091045 -153596809 - MER8 DNA MER2_type -62 177 2 869 142 33 40 chr2 97091240 97091416 -153596438 - MLT1F1 LTR MaLR -380 175 1 2287 192 38 38 chr2 97091453 97091954 -153595900 - MLT1D LTR MaLR 0 505 5 666 288 40 89 chr2 97091956 97092282 -153595572 - MLT1D-int LTR MaLR -34 1337 1028 1473 241 50 29 chr2 97092400 97092782 -153595072 - MLT1B LTR MaLR 0 390 1 297 291 0 13 chr2 97092916 97092995 -153594859 - MLT1L LTR MaLR -537 78 1 235 264 70 54 chr2 97093136 97093265 -153594589 + LTR67 LTR ERVL 405 535 -22 306 185 62 25 chr2 97093292 97093373 -153594481 + L1MCa LINE L1 1974 2057 -4369 230 331 118 0 chr2 97093492 97093619 -153594235 - L1MC/D LINE L1 -2154 5654 5513 2284 97 0 0 chr2 97093795 97094094 -153593760 - AluSx SINE Alu -13 299 1 337 302 145 11 chr2 97094382 97094561 -153593293 + MIR SINE MIR 50 252 -10 1596 188 96 60 chr2 97094661 97094734 -153593120 - MLT1C LTR MaLR 0 467 398 1694 163 14 3 chr2 97094734 97095022 -153592832 + AluJb SINE Alu 13 303 -9 1596 188 96 60 chr2 97095022 97095394 -153592460 - MLT1C LTR MaLR -69 398 6 230 241 146 80 chr2 97096120 97096332 -153591522 - L2 LINE L2 -53 3219 2994 2047 128 20 0 chr2 97096631 97096927 -153590927 - AluSx SINE Alu -10 302 1 296 284 32 0 chr2 97097358 97097453 -153590401 - MER117 DNA MER1_type 0 197 100 231 274 108 10 chr2 97097710 97097812 -153590042 - MIR SINE MIR -71 191 80 2330 72 16 0 chr2 97098042 97098348 -153589506 - AluSx SINE Alu -1 311 1 402 181 38 19 chr2 97098353 97098438 -153589416 - Charlie8 DNA MER1_type -177 164 75 1000 184 0 23 chr2 97098438 97098612 -153589242 + FAM SINE Alu 1 170 -5 402 181 38 19 chr2 97098612 97098631 -153589223 - Charlie8 DNA MER1_type -266 75 58 2052 131 0 0 chr2 97098647 97098944 -153588910 - AluSq SINE Alu -16 297 1 2075 109 7 0 chr2 97100224 97100518 -153587336 - AluSq SINE Alu -17 296 1 322 274 105 8 chr2 97103517 97103641 -153584213 - MER91A DNA MER1_type 0 196 61 26 30 0 0 chr2 97104361 97104394 -153583460 + GC_rich Low_complexity Low_complexity 1 33 0 213 224 0 0 chr2 97105150 97105199 -153582655 + CT-rich Low_complexity Low_complexity 2 50 0 199 286 32 16 chr2 97105523 97105586 -153582268 + L2 LINE L2 3154 3217 -96 2103 107 7 13 chr2 97105959 97106259 -153581595 + AluSx SINE Alu 1 298 -14 788 149 7 43 chr2 97107245 97107386 -153580468 + AluSq/x SINE Alu 7 142 -170 211 326 0 23 chr2 97108147 97108233 -153579621 - MIR3 SINE MIR -110 98 15 1567 101 15 45 chr2 97108443 97108560 -153579294 - Tigger1 DNA MER2_type -263 2155 2036 2293 92 0 0 chr2 97108560 97108854 -153579000 - AluSg SINE Alu -15 295 2 1567 101 15 45 chr2 97108854 97109004 -153578850 - Tigger1 DNA MER2_type -382 2036 1896 208 193 0 53 chr2 97109402 97109459 -153578395 + (CCCCG)n Simple_repeat Simple_repeat 2 55 0 910 153 18 41 chr2 97109814 97109984 -153577870 + FRAM SINE Alu 1 166 0 411 273 98 0 chr2 97110359 97110491 -153577363 - MIR SINE MIR -74 188 44 252 214 0 54 chr2 97111002 97111058 -153576796 - L3 LINE CR1 -118 1459 1407 188 302 48 0 chr2 97111913 97111976 -153575878 - L3 LINE CR1 -191 1386 1321 368 228 31 31 chr2 97112030 97112157 -153575697 - MIR3 SINE MIR -10 198 72 268 277 73 0 chr2 97112860 97112974 -153574880 + MIR SINE MIR 30 150 -68 336 238 67 19 chr2 97112989 97113094 -153574760 - L2 LINE L2 -2 3311 3202 201 246 123 53 chr2 97113228 97113342 -153574512 - MIR SINE MIR -57 205 84 226 213 33 33 chr2 97113568 97113629 -153574225 - MIR SINE MIR -119 143 83 847 143 13 19 chr2 97114617 97114771 -153573083 + FRAM SINE Alu 8 160 -16 395 361 32 0 chr2 97115071 97115226 -153572628 + MIR SINE MIR 29 188 -74 241 185 19 0 chr2 97116793 97116847 -153571007 - MIR SINE MIR -72 136 82 349 267 31 81 chr2 97117483 97117644 -153570210 + MIR SINE MIR 104 256 -6 192 152 0 0 chr2 97117830 97117863 -153569991 + T-rich Low_complexity Low_complexity 1 33 0 967 293 91 57 chr2 97118803 97118989 -153568865 - L1MEd LINE L1 -5162 957 779 2305 72 10 3 chr2 97118989 97119294 -153568560 - AluY SINE Alu -4 307 1 967 293 91 57 chr2 97119294 97120031 -153567823 - L1MEd LINE L1 -5340 779 3 1799 162 3 13 chr2 97120293 97120602 -153567252 + AluJo SINE Alu 7 312 0 1693 134 10 38 chr2 97120827 97121119 -153566735 + THE1B LTR MaLR 73 356 -8 2040 117 16 3 chr2 97121519 97121827 -153566027 - AluSx SINE Alu 0 312 1 1766 160 0 16 chr2 97121827 97122134 -153565720 - AluSx SINE Alu -10 302 1 195 245 57 0 chr2 97122187 97122240 -153565614 + MIR SINE MIR 84 139 -69 2094 113 10 0 chr2 97122720 97123022 -153564832 + AluSx SINE Alu 1 305 -7 955 213 19 61 chr2 97123567 97123830 -153564024 + MLT1J LTR MaLR 10 261 -250 412 317 90 6 chr2 97124157 97124324 -153563530 - MIR SINE MIR -69 193 13 216 299 70 24 chr2 97124411 97124558 -153563296 + L2 LINE L2 2212 2362 -952 1435 245 49 53 chr2 97124914 97125424 -153562430 + MLT1J LTR MaLR 4 511 0 435 342 88 35 chr2 97125453 97125772 -153562082 + L2 LINE L2 2928 3263 -9 192 234 0 0 chr2 97125772 97125819 -153562035 + (CA)n Simple_repeat Simple_repeat 1 47 0 651 270 129 4 chr2 97126611 97126889 -153560965 - L1ME3A LINE L1 -86 6084 5772 395 289 80 37 chr2 97128040 97128227 -153559627 + MIR SINE MIR 26 220 -42 2143 90 4 4 chr2 97128236 97128542 -153559312 + AluSc SINE Alu 1 306 0 1051 213 73 23 chr2 97128552 97128852 -153559002 - MER39 LTR ERV1 0 707 393 315 188 258 0 chr2 97128909 97129002 -153558852 - MER34 LTR ERV1 -427 115 6 1681 185 17 0 chr2 97129491 97129778 -153558076 + AluJo SINE Alu 1 292 -20 214 327 0 0 chr2 97129821 97129876 -153557978 + MER5A DNA MER1_type 127 181 -8 203 379 21 11 chr2 97129893 97129988 -153557866 + MIR3 SINE MIR 94 189 -19 637 298 18 0 chr2 97130241 97130409 -153557445 + MER5B DNA MER1_type 1 171 -7 382 162 54 14 chr2 97130858 97130932 -153556922 + MIR SINE MIR 59 135 -73 2640 42 0 10 chr2 97131093 97131400 -153556454 - AluY SINE Alu -7 304 1 838 137 0 0 chr2 97134639 97134785 -153553069 + FLAM_C SINE Alu 1 146 0 311 273 23 83 chr2 97136120 97136252 -153551602 - MER5A DNA MER1_type -45 144 21 363 223 97 157 chr2 97136839 97136917 -153550937 - L1ME4a LINE L1 0 6121 6040 2083 134 7 0 chr2 97136917 97137207 -153550647 + AluJb SINE Alu 5 296 -16 363 223 97 157 chr2 97137207 97137447 -153550407 - L1ME4a LINE L1 -81 6040 5822 435 258 45 15 chr2 97138880 97139012 -153548842 + MIR SINE MIR 48 183 -79 5651 220 45 46 chr2 97139382 97141001 -153546853 + L1M4 LINE L1 16 1633 -4909 2100 137 0 0 chr2 97141011 97141296 -153546558 - AluSx SINE Alu -27 285 1 291 179 30 0 chr2 97141296 97141363 -153546491 + L1M4 LINE L1 1602 1670 -4872 1326 223 48 12 chr2 97141397 97141729 -153546125 + L1M4 LINE L1 1647 1990 -4656 2342 93 7 0 chr2 97142046 97142337 -153545517 + AluSg SINE Alu 1 293 -17 580 296 134 36 chr2 97142969 97143394 -153544460 + L1MEd LINE L1 826 1289 -1218 872 130 8 8 chr2 97143400 97143531 -153544323 + FLAM_C SINE Alu 1 131 -12 674 254 33 51 chr2 97143534 97143810 -153544044 + HAL1 LINE L1 1296 1566 -941 1835 183 0 7 chr2 97143855 97144155 -153543699 - AluJb SINE Alu -14 298 1 482 331 53 21 chr2 97144177 97144441 -153543413 + L1M4c LINE L1 1594 1977 -766 2246 121 7 0 chr2 97144532 97144829 -153543025 - AluSq SINE Alu -14 299 1 1313 192 36 54 chr2 97145024 97145300 -153542554 - AluJo SINE Alu -38 274 4 5195 149 64 39 chr2 97145302 97146843 -153541011 + L1MA9 LINE L1 4712 6304 -8 335 196 0 0 chr2 97146873 97146929 -153540925 - L1MC4 LINE L1 -1339 6703 6648 2326 99 0 0 chr2 97146930 97147223 -153540631 - AluSx SINE Alu -19 293 1 477 289 29 49 chr2 97147237 97147441 -153540413 + L1MB7 LINE L1 5114 5313 -833 2017 138 6 13 chr2 97147632 97147944 -153539910 + AluJo SINE Alu 2 311 -1 307 302 0 24 chr2 97148057 97148183 -153539671 + L1MB7 LINE L1 5702 5824 -1984 1938 151 3 28 chr2 97148183 97148502 -153539352 - AluJo SINE Alu -1 311 1 815 215 38 6 chr2 97148729 97148940 -153538914 + L1PA8A LINE L1 5517 5736 -408 1977 166 13 13 chr2 97148941 97149321 -153538533 + L1MB7 LINE L1 5797 6176 -8 389 311 23 8 chr2 97150501 97150633 -153537221 - MIR SINE MIR -58 150 17 1356 234 129 9 chr2 97150980 97151330 -153536524 - MSTD LTR MaLR -4 392 1 647 300 99 35 chr2 97151714 97152137 -153535717 + LTR16B LTR ERVL 3 452 -12 298 275 143 0 chr2 97152307 97152398 -153535456 - MIR SINE MIR -43 219 116 426 235 0 31 chr2 97152402 97152500 -153535354 + MIR SINE MIR 107 201 -61 1343 115 5 16 chr2 97153063 97153254 -153534600 - AluSg/x SINE Alu -20 292 104 960 101 7 30 chr2 97153254 97153552 -153534302 + (TTTC)n Simple_repeat Simple_repeat 1 291 0 767 112 24 24 chr2 97153563 97153732 -153534122 + CT-rich Low_complexity Low_complexity 3 171 0 391 247 21 9 chr2 97153845 97154163 -153533691 + CT-rich Low_complexity Low_complexity 1 321 0 2144 117 0 0 chr2 97154185 97154646 -153533208 - AluSx SINE Alu 0 461 1 344 225 67 92 chr2 97154647 97154767 -153533087 + L1MB5 LINE L1 3941 4057 -2089 3580 202 28 28 chr2 97154847 97155809 -153532045 + L1MB5 LINE L1 4143 5104 -1042 1124 117 0 34 chr2 97155809 97155976 -153531878 + AluSc SINE Alu 128 290 -19 201 74 0 0 chr2 97155976 97156003 -153531851 + (TA)n Simple_repeat Simple_repeat 1 27 0 1124 117 0 34 chr2 97156003 97156014 -153531840 + AluSc SINE Alu 290 300 -9 567 224 0 26 chr2 97156014 97156170 -153531684 + L1MB5 LINE L1 5110 5261 -885 405 158 10 50 chr2 97156271 97156372 -153531482 + L1MB5 LINE L1 5237 5333 -813 830 223 6 0 chr2 97156372 97156538 -153531316 + FRAM SINE Alu 1 166 -10 2272 72 0 7 chr2 97156543 97156820 -153531034 + AluSq SINE Alu 2 276 -37 2033 184 30 32 chr2 97156851 97157317 -153530537 + L1MB5 LINE L1 5367 5831 -343 490 306 104 30 chr2 97157316 97157816 -153530038 + L1MC/D LINE L1 2231 2767 -3379 * 635 285 57 0 chr2 97157832 97158025 -153529829 - MER3 DNA MER1_type 0 209 6 286 303 11 0 chr2 97158102 97158191 -153529663 + L1MC4 LINE L1 7803 7892 -150 200 324 27 0 chr2 97158196 97158270 -153529584 + GA-rich Low_complexity Low_complexity 4 79 0 278 276 17 9 chr2 97158271 97158387 -153529467 + L1MC4 LINE L1 7922 8038 -4 614 265 29 32 chr2 97158405 97158718 -153529136 + L1MC/D LINE L1 2853 3164 -2982 339 268 96 86 chr2 97158790 97159010 -153528844 + L1MC/D LINE L1 3181 3402 -2744 * 536 314 124 35 chr2 97158986 97159301 -153528553 + L1MC/D LINE L1 4143 4485 -1661 983 98 58 195 chr2 97159303 97159580 -153528274 - Tigger5 DNA MER2_type 0 2323 2085 * 1106 224 9 22 chr2 97159576 97159808 -153528046 - Tigger5 DNA MER2_type -2091 232 4 312 262 69 14 chr2 97159810 97159955 -153527899 + L1MC/D LINE L1 4485 4637 -1509 679 233 67 10 chr2 97159963 97160336 -153527518 + MLT1C LTR MaLR 6 461 -6 410 296 65 36 chr2 97160560 97160869 -153526985 + L1MC/D LINE L1 4942 5269 -877 706 218 168 0 chr2 97160869 97161048 -153526806 + MER3 DNA MER1_type 1 209 0 410 296 65 36 chr2 97161048 97161181 -153526673 + L1MC/D LINE L1 5269 5397 -749 2391 113 0 0 chr2 97161193 97161660 -153526194 - AluSq SINE Alu 0 467 1 362 292 76 21 chr2 97161660 97161804 -153526050 + L1MC/D LINE L1 5413 5564 -2478 1447 193 4 0 chr2 97162040 97162284 -153525570 + AluJb SINE Alu 1 245 -67 255 125 0 0 chr2 97162300 97162340 -153525514 + (TA)n Simple_repeat Simple_repeat 1 40 0 22 0 0 0 chr2 97162343 97162365 -153525489 + AT_rich Low_complexity Low_complexity 1 22 0 1242 169 219 22 chr2 97162450 97162865 -153524989 + LTR54B LTR ERV1 1 497 -1 1619 137 148 0 chr2 97163208 97163471 -153524383 - AluJb SINE Alu 0 302 1 1177 142 0 28 chr2 97163690 97163866 -153523988 - AluJo SINE Alu -141 171 1 2090 155 29 39 chr2 97163896 97164310 -153523544 - L1MB3 LINE L1 0 6183 5774 784 219 8 2 chr2 97164310 97164560 -153523294 + Tigger7 DNA MER2_type 8 317 -416 536 82 41 10 chr2 97164557 97164654 -153523200 + Tigger7 DNA MER2_type 2298 2397 -90 * 559 212 0 35 chr2 97164656 97164769 -153523085 + FLAM_C SINE Alu 2 110 -33 261 0 0 0 chr2 97164769 97164798 -153523056 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 330 26 0 0 chr2 97164797 97164836 -153523018 + (CA)n Simple_repeat Simple_repeat 1 39 0 406 171 19 67 chr2 97164845 97164950 -153522904 + Tigger7 DNA MER2_type 2392 2491 0 1007 156 0 22 chr2 97164950 97165129 -153522725 - L1MB3 LINE L1 -400 5783 5609 476 322 98 49 chr2 97166128 97166546 -153521308 + L1M4 LINE L1 4756 5203 -943 2676 29 3 19 chr2 97166546 97166861 -153520993 + AluY SINE Alu 2 311 0 476 322 98 49 chr2 97166861 97166933 -153520921 + L1M4 LINE L1 5203 5270 -876 429 274 30 2 chr2 97166938 97167126 -153520728 + L1P5 LINE L1 5264 5439 -715 206 250 0 0 chr2 97167535 97167579 -153520275 + (CA)n Simple_repeat Simple_repeat 2 45 0 950 121 21 0 chr2 97167719 97167859 -153519995 + FLAM_C SINE Alu 1 143 0 212 170 0 75 chr2 97167867 97167920 -153519934 + G-rich Low_complexity Low_complexity 4 52 0 21 0 0 0 chr2 97167982 97168003 -153519851 + AT_rich Low_complexity Low_complexity 1 21 0 2493 93 0 0 chr2 97168445 97168755 -153519099 + AluSx SINE Alu 1 310 -2 574 324 63 57 chr2 97169168 97169659 -153518195 + L1MEc LINE L1 107 600 -5796 704 191 32 0 chr2 97169708 97169834 -153518020 + FLAM_A SINE Alu 1 130 -3 433 229 0 0 chr2 97169959 97170042 -153517812 + AluJ SINE Alu 40 122 -190 1135 144 6 6 chr2 97170085 97170258 -153517596 + AluJ SINE Alu 129 301 -11 234 303 37 37 chr2 97170273 97170382 -153517472 + MLT1-int LTR MaLR 756 864 -507 892 230 35 13 chr2 97170387 97170617 -153517237 + MLT1A2 LTR MaLR 132 366 -8 3333 75 2 0 chr2 97170822 97171248 -153516606 + L1PA8 LINE L1 5746 6172 0 1570 176 82 82 chr2 97171491 97171917 -153515937 + MLT1F LTR MaLR 117 542 0 670 292 30 4 chr2 97171948 97172181 -153515673 - LTR16A LTR ERVL 0 450 212 236 259 94 0 chr2 97172342 97172427 -153515427 - L1M4 LINE L1 -1310 4836 4744 1319 197 70 68 chr2 97172678 97172965 -153514889 - MER82 DNA MER2_type -1 652 362 877 173 0 0 chr2 97172965 97173098 -153514756 + FLAM_C SINE Alu 1 133 0 1319 197 70 68 chr2 97173098 97173165 -153514689 - MER82 DNA MER2_type -291 362 297 893 83 0 0 chr2 97173176 97173297 -153514557 - L1PA8 LINE L1 0 6172 6052 6447 77 26 57 chr2 97173303 97175628 -153512226 - SVA Other Other -518 1386 10 30962 123 8 53 chr2 97175628 97181990 -153505864 - L1PA8 LINE L1 -106 6066 1 1451 193 11 4 chr2 97181990 97182264 -153505590 - MER82 DNA MER2_type -369 284 9 291 271 199 20 chr2 97182765 97182916 -153504938 - MIR SINE MIR 0 262 85 909 272 125 17 chr2 97182947 97183405 -153504449 - MER115 DNA AcHobo 0 4031 184 2038 139 43 45 chr2 97183413 97183788 -153504066 - THE1C LTR MaLR -1 374 1 207 238 0 0 chr2 97185256 97185298 -153502556 - MIR SINE MIR -4 258 217 183 167 0 0 chr2 97185347 97185383 -153502471 - MIR SINE MIR -170 92 57 * 438 247 20 47 chr2 97185381 97185497 -153502357 + MIR SINE MIR 74 187 -75 2575 148 31 0 chr2 97185497 97185910 -153501944 + MSTB LTR MaLR 1 426 0 438 247 20 47 chr2 97185910 97185943 -153501911 + MIR SINE MIR 187 219 -43 308 138 86 0 chr2 97186199 97186257 -153501597 + L1MEc LINE L1 35 97 -6299 248 53 26 0 chr2 97186260 97186298 -153501556 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1153 297 34 23 chr2 97186351 97186829 -153501025 - LTR45 LTR ERV1 -39 486 4 1442 275 79 21 chr2 97186870 97187480 -153500374 + L1MEc LINE L1 111 755 -5641 2121 131 0 0 chr2 97187502 97187829 -153500025 - AluSc SINE Alu 0 327 1 346 267 0 9 chr2 97187869 97187974 -153499880 + L1MEc LINE L1 747 850 -5546 2468 180 27 7 chr2 97187975 97188424 -153499430 - LTR24 LTR ERV1 0 467 10 438 280 9 27 chr2 97188453 97188678 -153499176 + L1MEc LINE L1 852 1072 -5324 2211 103 0 30 chr2 97188686 97188988 -153498866 - AluSg SINE Alu -17 293 1 1424 189 0 0 chr2 97188993 97189236 -153498618 - AluSg/x SINE Alu 0 312 70 259 264 77 26 chr2 97189243 97189398 -153498456 + L1MEc LINE L1 1205 1367 -4848 3116 55 0 0 chr2 97189404 97189788 -153498066 - L1PA5 LINE L1 -1 6153 5770 38207 34 27 1 chr2 97189808 97195245 -153492609 - L1PA3 LINE L1 -1 6154 578 757 50 0 20 chr2 97195212 97195311 -153492543 - L1PA3 LINE L1 -6048 98 2 * 1641 21 0 0 chr2 97195314 97195500 -153492354 - L1P2 LINE L1 -370 5784 5599 3523 104 9 68 chr2 97195500 97196074 -153491780 - LTR8 LTR ERV1 -151 540 1 1289 126 29 67 chr2 97196086 97196324 -153491530 + LTR24C LTR ERV1 1 229 -406 1894 123 49 87 chr2 97196325 97196715 -153491139 - THE1C LTR MaLR 0 375 1 9849 108 1 115 chr2 97196715 97198497 -153489357 - THE1C-int LTR MaLR 0 1580 2 1836 132 97 23 chr2 97198498 97198847 -153489007 - THE1C LTR MaLR 0 375 1 1882 136 161 3 chr2 97198847 97199201 -153488653 + LTR24C LTR ERV1 226 635 0 2898 155 71 45 chr2 97199222 97199829 -153488025 - LTR8A LTR ERV1 -7 720 98 719 55 0 0 chr2 97199829 97199920 -153487934 - LTR8A LTR ERV1 -567 160 70 1983 130 7 14 chr2 97199920 97200205 -153487649 + AluSq SINE Alu 1 283 -30 633 93 0 0 chr2 97200217 97200303 -153487551 - LTR8A LTR ERV1 -641 86 1 1966 161 71 27 chr2 97200322 97200731 -153487123 - MER34C LTR ERV1 0 585 159 2547 64 0 6 chr2 97200733 97201044 -153486810 + AluSc SINE Alu 1 309 0 1459 161 28 20 chr2 97201058 97201306 -153486548 + LTR8 LTR ERV1 442 691 0 903 184 6 0 chr2 97201324 97201492 -153486362 + MER67C LTR ERV1 529 697 -13 1957 158 11 20 chr2 97201493 97201842 -153486012 - MER31A LTR ERV1 0 485 140 1932 154 20 0 chr2 97201857 97202163 -153485691 + AluSx SINE Alu 1 312 0 4772 180 83 79 chr2 97202191 97203233 -153484621 - MER31A-int LTR ERV1 -209 4727 3690 1820 181 10 0 chr2 97203233 97203542 -153484312 + AluSx SINE Alu 1 312 0 4772 180 83 79 chr2 97203542 97203628 -153484226 - MER31A-int LTR ERV1 -1246 3690 3606 1800 163 3 33 chr2 97203628 97203928 -153483926 - AluJb SINE Alu -21 291 1 4772 180 83 79 chr2 97203928 97204140 -153483714 - MER31A-int LTR ERV1 -1330 3606 3381 890 124 1 5 chr2 97204155 97204313 -153483541 - MER83-int LTR ERV1 -355 4525 3731 958 192 39 39 chr2 97204370 97204646 -153483208 - MER83-int LTR ERV1 -2891 3707 2413 251 122 0 110 chr2 97204650 97204706 -153483148 - MER83-int LTR ERV1 -3113 3485 3439 8321 183 52 55 chr2 97204706 97206467 -153481387 - MER52A LTR ERV1 0 1755 1 251 122 0 110 chr2 97206467 97206492 -153481362 - MER83-int LTR ERV1 -3159 3439 3413 8927 154 33 7 chr2 97206520 97207740 -153480114 - MER83-int LTR ERV1 -800 4080 2893 2221 129 0 3 chr2 97207740 97208050 -153479804 - AluSg SINE Alu -1 309 1 8927 154 33 7 chr2 97208050 97208787 -153479067 - MER83-int LTR ERV1 -1987 2893 12 2715 127 72 0 chr2 97208787 97209205 -153478649 - MER83 LTR ERV1 0 448 1 2737 192 33 106 chr2 97209452 97210321 -153477533 - MER31A-int LTR ERV1 -2306 2630 1844 1984 119 82 23 chr2 97210321 97210675 -153477179 + THE1C LTR MaLR 1 375 0 2737 192 33 106 chr2 97210675 97210816 -153477038 - MER31A-int LTR ERV1 -3092 1844 1694 907 223 0 0 chr2 97210829 97211004 -153476850 + FRAM SINE Alu 2 176 0 451 232 8 15 chr2 97211009 97211139 -153476715 - MER31A-int LTR ERV1 -3269 1667 1315 1085 181 22 41 chr2 97211263 97211534 -153476320 - MER31A-int LTR ERV1 -3421 1515 1250 1370 98 10 10 chr2 97211539 97211732 -153476122 - AluSg/x SINE Alu -11 301 109 625 97 65 73 chr2 97211741 97211849 -153476005 - MER31A-int LTR ERV1 -3730 1206 1098 1646 143 107 0 chr2 97211849 97212121 -153475733 - AluSx SINE Alu -11 301 1 625 97 65 73 chr2 97212121 97212136 -153475718 - MER31A-int LTR ERV1 -3838 1098 1084 2843 224 41 20 chr2 97212196 97212898 -153474956 - MER31A-int LTR ERV1 -4018 918 202 763 188 74 13 chr2 97212997 97213146 -153474708 + AluJo SINE Alu 2 159 -153 2283 140 29 0 chr2 97213146 97213495 -153474359 + THE1B LTR MaLR 6 364 0 661 175 50 8 chr2 97213498 97213618 -153474236 + AluJo SINE Alu 158 282 -30 207 0 0 0 chr2 97213620 97213643 -153474211 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 9516 135 16 28 chr2 97213741 97215758 -153472096 + L1PA8 LINE L1 739 2754 -3707 2354 36 0 0 chr2 97215758 97216032 -153471822 + L1PA2 LINE L1 5877 6155 0 * 19844 110 8 4 chr2 97216030 97219765 -153468089 + L1PA8 LINE L1 2738 6485 -2 536 213 64 35 chr2 97219805 97219946 -153467908 - MER31A-int LTR ERV1 -4779 157 13 2600 108 3 18 chr2 97219968 97220349 -153467505 + THE1C LTR MaLR 1 375 0 1547 180 69 47 chr2 97220383 97220805 -153467049 - MER31A LTR ERV1 -9 476 46 216 0 0 0 chr2 97220846 97220870 -153466984 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2168 96 0 0 chr2 97220874 97221145 -153466709 - AluSx SINE Alu -37 275 5 430 136 15 0 chr2 97221149 97221215 -153466639 + MLT1B LTR MaLR 324 390 0 795 223 47 115 chr2 97221358 97221535 -153466319 - LTR49 LTR ERV1 -6 781 594 2296 104 3 0 chr2 97221535 97221832 -153466022 - AluSq SINE Alu -15 298 1 795 223 47 115 chr2 97221832 97221972 -153465882 - LTR49 LTR ERV1 -193 594 446 1862 131 13 51 chr2 97221972 97222284 -153465570 + AluJo SINE Alu 5 304 -8 795 223 47 115 chr2 97222284 97222607 -153465247 - LTR49 LTR ERV1 -341 446 5 296 192 0 5 chr2 97223046 97223111 -153464743 - AluSx SINE Alu -2 300 243 4445 78 0 0 chr2 97223111 97223665 -153464189 - MER41A LTR ERV1 0 554 1 1546 167 4 4 chr2 97223665 97223911 -153463943 - AluSx SINE Alu -66 246 1 486 232 7 46 chr2 97223912 97224063 -153463791 - MLT1A2 LTR MaLR -207 167 23 464 122 22 44 chr2 97224066 97224156 -153463698 - MER34B LTR ERV1 -4 561 474 2275 77 47 17 chr2 97224157 97224457 -153463397 + AluSx SINE Alu 1 309 -3 368 145 48 36 chr2 97224500 97224583 -153463271 - LTR48 LTR ERV1 -90 697 614 585 106 65 198 chr2 97224596 97224673 -153463181 - LTR49 LTR ERV1 -239 356 270 2012 162 0 6 chr2 97224673 97224987 -153462867 + AluJo SINE Alu 1 312 0 585 106 65 198 chr2 97224987 97225126 -153462728 - LTR49 LTR ERV1 -325 270 169 2062 114 3 17 chr2 97225584 97225912 -153461942 + AluSx SINE Alu 1 324 0 902 151 0 56 chr2 97225993 97226172 -153461682 - LTR49 LTR ERV1 -424 171 3 733 120 8 45 chr2 97226485 97226618 -153461236 - LTR35 LTR ERV1 -2 616 489 268 109 51 36 chr2 97226639 97226776 -153461078 + HERV17 LTR ERV1 711 849 -7777 204 111 0 0 chr2 97226779 97226815 -153461039 + (GA)n Simple_repeat Simple_repeat 2 37 0 1727 138 68 67 chr2 97226815 97227142 -153460712 - LTR35 LTR ERV1 -103 515 125 1850 169 7 7 chr2 97227142 97227444 -153460410 - AluJb SINE Alu -10 302 1 1727 138 68 67 chr2 97227444 97227570 -153460284 - LTR35 LTR ERV1 -493 125 1 3426 126 21 4 chr2 97227586 97228101 -153459753 - LTR45 LTR ERV1 0 525 2 1844 136 91 0 chr2 97228135 97228421 -153459433 + AluSx SINE Alu 1 312 0 262 174 93 47 chr2 97228657 97228743 -153459111 - MIR3 SINE MIR -54 154 65 455 305 32 13 chr2 97229123 97229277 -153458577 - MLT1L LTR MaLR -2 613 457 1563 176 35 18 chr2 97229290 97229574 -153458280 + AluJo SINE Alu 5 293 -19 2619 64 0 0 chr2 97229805 97230116 -153457738 + AluY SINE Alu 1 311 0 504 241 83 15 chr2 97230130 97230263 -153457591 - MLT1L LTR MaLR -354 261 120 565 192 58 0 chr2 97231092 97231196 -153456658 - AluJ SINE Alu -14 298 189 8287 198 55 10 chr2 97231198 97232857 -153454997 + MER52A LTR ERV1 22 1755 0 769 129 0 68 chr2 97232861 97232993 -153454861 - AluJ SINE Alu -126 186 64 2364 73 0 26 chr2 97233000 97233303 -153454551 + AluY SINE Alu 1 295 -16 682 153 18 94 chr2 97233441 97233611 -153454243 - MLT1C LTR MaLR 0 467 311 466 127 0 0 chr2 97233611 97233674 -153454180 + AluS SINE Alu 1 63 -255 2067 131 3 0 chr2 97233674 97233965 -153453889 + AluSx SINE Alu 13 304 -8 336 162 74 57 chr2 97233965 97234092 -153453762 - MLT1B LTR MaLR -126 264 171 3582 166 26 3 chr2 97234117 97234796 -153453058 - L1MB3 LINE L1 -35 6148 5454 300 136 0 0 chr2 97234796 97234840 -153453014 - MLT1B LTR MaLR -231 159 116 555 141 107 8 chr2 97234849 97234970 -153452884 + MLT1C LTR MaLR 1 133 -334 180 0 0 0 chr2 97235022 97235042 -153452812 + (T)n Simple_repeat Simple_repeat 1 20 0 2197 89 3 71 chr2 97235062 97235386 -153452468 + AluSq SINE Alu 1 302 -11 443 121 15 0 chr2 97235590 97235656 -153452198 - AluJ/FLAM SINE Alu -244 68 2 309 275 49 25 chr2 97235659 97235788 -153452066 - L1ME LINE L1 -421 5700 5565 449 283 113 79 chr2 97235940 97236434 -153451420 - MLT1J LTR MaLR 0 511 1 591 166 0 0 chr2 97236785 97236942 -153450912 + (TG)n Simple_repeat Simple_repeat 1 157 0 4567 228 65 51 chr2 97236942 97237349 -153450505 + MLT-int LTR MaLR 6 406 -1329 1694 118 87 49 chr2 97237349 97237637 -153450217 + AluJb SINE Alu 1 299 -13 4567 228 65 51 chr2 97237637 97237648 -153450206 + MLT-int LTR MaLR 406 415 -1320 2269 111 0 3 chr2 97237648 97237946 -153449908 + AluSx SINE Alu 11 307 -5 4567 228 65 51 chr2 97237946 97238844 -153449010 + MLT-int LTR MaLR 415 1342 -393 * 22335 102 3 2 chr2 97238842 97242225 -153445629 + L1P LINE L1 1598 4984 -1162 368 145 48 36 chr2 97242397 97242480 -153445374 - LTR48 LTR ERV1 -90 697 614 486 116 74 204 chr2 97242493 97242570 -153445284 - LTR49 LTR ERV1 -239 356 271 1915 194 0 6 chr2 97242570 97242884 -153444970 + AluJo SINE Alu 1 312 0 486 116 74 204 chr2 97242884 97243022 -153444832 - LTR49 LTR ERV1 -324 271 169 2075 111 3 17 chr2 97243484 97243812 -153444042 + AluSx SINE Alu 1 324 0 910 151 0 56 chr2 97243893 97244072 -153443782 - LTR49 LTR ERV1 -424 171 3 707 135 8 45 chr2 97244386 97244519 -153443335 - LTR35 LTR ERV1 -2 616 489 268 109 51 36 chr2 97244536 97244673 -153443181 + HERV17 LTR ERV1 711 849 -7777 266 114 0 0 chr2 97244676 97244720 -153443134 + (GA)n Simple_repeat Simple_repeat 2 45 0 1725 138 68 67 chr2 97244720 97245047 -153442807 - LTR35 LTR ERV1 -103 515 125 1850 169 7 7 chr2 97245047 97245349 -153442505 - AluJb SINE Alu -10 302 1 1725 138 68 67 chr2 97245349 97245475 -153442379 - LTR35 LTR ERV1 -493 125 1 3426 126 21 4 chr2 97245491 97246006 -153441848 - LTR45 LTR ERV1 0 525 2 1844 136 91 0 chr2 97246040 97246326 -153441528 + AluSx SINE Alu 1 312 0 262 174 93 47 chr2 97246562 97246648 -153441206 - MIR3 SINE MIR -54 154 65 455 305 32 13 chr2 97247028 97247182 -153440672 - MLT1L LTR MaLR -2 613 457 1563 176 35 18 chr2 97247195 97247479 -153440375 + AluJo SINE Alu 5 293 -19 2619 64 0 0 chr2 97247710 97248021 -153439833 + AluY SINE Alu 1 311 0 504 241 83 15 chr2 97248035 97248168 -153439686 - MLT1L LTR MaLR -354 261 120 565 192 58 0 chr2 97248997 97249101 -153438753 - AluJ SINE Alu -14 298 189 8252 197 57 10 chr2 97249103 97250759 -153437095 + MER52A LTR ERV1 22 1755 0 769 129 0 68 chr2 97250763 97250895 -153436959 - AluJ SINE Alu -126 186 64 2373 72 0 26 chr2 97250902 97251206 -153436648 + AluY SINE Alu 1 296 -15 682 153 18 94 chr2 97251344 97251514 -153436340 - MLT1C LTR MaLR 0 467 311 466 127 0 0 chr2 97251514 97251577 -153436277 + AluS SINE Alu 1 63 -255 2076 130 3 0 chr2 97251577 97251869 -153435985 + AluSx SINE Alu 13 305 -7 336 162 74 57 chr2 97251869 97251996 -153435858 - MLT1B LTR MaLR -126 264 171 3582 166 26 3 chr2 97252021 97252700 -153435154 - L1MB3 LINE L1 -35 6148 5454 300 136 0 0 chr2 97252700 97252744 -153435110 - MLT1B LTR MaLR -231 159 116 555 141 107 8 chr2 97252753 97252874 -153434980 + MLT1C LTR MaLR 1 133 -334 180 0 0 0 chr2 97252926 97252946 -153434908 + (T)n Simple_repeat Simple_repeat 1 20 0 2190 89 3 71 chr2 97252966 97253291 -153434563 + AluSq SINE Alu 1 303 -10 443 121 15 0 chr2 97253495 97253561 -153434293 - AluJ/FLAM SINE Alu -244 68 2 309 275 49 25 chr2 97253564 97253693 -153434161 - L1ME LINE L1 -421 5700 5565 443 283 113 81 chr2 97253845 97254340 -153433514 - MLT1J LTR MaLR 0 511 1 591 166 0 0 chr2 97254691 97254848 -153433006 + (TG)n Simple_repeat Simple_repeat 1 157 0 6214 222 70 40 chr2 97254848 97255255 -153432599 + MSTD-int LTR MaLR 6 399 -1336 1693 132 77 38 chr2 97255255 97255542 -153432312 + AluJb SINE Alu 1 298 -14 6214 222 70 40 chr2 97255542 97255553 -153432301 + MSTD-int LTR MaLR 399 408 -1327 2015 130 3 10 chr2 97255553 97255852 -153432002 + AluSx SINE Alu 11 307 -5 6214 222 70 40 chr2 97255852 97257109 -153430745 + MSTD-int LTR MaLR 408 1732 -3 331 180 0 0 chr2 97257110 97257171 -153430683 + MSTD LTR MaLR 1 61 -335 216 0 0 0 chr2 97257172 97257196 -153430658 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1360 112 10 5 chr2 97257198 97257394 -153430460 - AluSg/x SINE Alu -31 281 85 668 234 105 75 chr2 97257394 97257728 -153430126 + MSTD LTR MaLR 53 396 0 1045 220 217 17 chr2 97257833 97258408 -153429446 + LTR50 LTR ERVL 2 773 0 2390 103 0 10 chr2 97258764 97259074 -153428780 - AluSx SINE Alu -5 307 1 2002 155 0 16 chr2 97259194 97259504 -153428350 + AluJo SINE Alu 1 305 -7 2179 113 10 13 chr2 97260617 97260917 -153426937 + AluSx SINE Alu 1 299 -13 529 269 164 65 chr2 97260922 97261386 -153426468 - L2 LINE L2 0 3313 2804 2336 154 37 40 chr2 97261447 97261662 -153426192 + MSTA LTR MaLR 1 216 -212 2176 138 0 0 chr2 97261662 97261966 -153425888 - AluSx SINE Alu -8 304 1 2336 154 37 40 chr2 97261966 97262179 -153425675 + MSTA LTR MaLR 216 428 0 225 65 0 0 chr2 97262198 97262229 -153425625 + (CA)n Simple_repeat Simple_repeat 2 32 0 3121 139 52 102 chr2 97262357 97263071 -153424783 - MER54B LTR ERVL -115 678 1 1609 169 28 65 chr2 97263103 97263393 -153424461 + AluJo SINE Alu 1 279 -33 207 88 0 0 chr2 97263401 97263435 -153424419 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1932 141 0 61 chr2 97263480 97263806 -153424048 - AluJb SINE Alu -6 306 1 1875 146 7 42 chr2 97263810 97264119 -153423735 - AluJb SINE Alu -14 298 1 820 239 54 43 chr2 97264559 97264892 -153422962 + L1ME LINE L1 1014 1342 -5292 2386 37 54 14 chr2 97264892 97265187 -153422667 + AluY SINE Alu 1 307 -4 820 239 54 43 chr2 97265187 97265226 -153422628 + L1ME LINE L1 1342 1379 -5255 1965 147 11 0 chr2 97265226 97265512 -153422342 + AluSx SINE Alu 24 312 0 820 239 54 43 chr2 97265512 97265524 -153422330 + L1ME LINE L1 1379 1389 -5245 1733 152 47 30 chr2 97265524 97265820 -153422034 + AluJo SINE Alu 1 301 -11 2262 127 0 0 chr2 97265820 97266120 -153421734 + AluSx SINE Alu 1 300 -12 820 239 54 43 chr2 97266120 97266171 -153421683 + L1ME LINE L1 1389 1438 -5196 1864 169 3 69 chr2 97266171 97266474 -153421380 - MLT1A1 LTR MaLR 0 365 92 2368 82 3 44 chr2 97266474 97266791 -153421063 - AluY SINE Alu -7 304 1 1864 169 3 69 chr2 97266791 97266878 -153420976 - MLT1A1 LTR MaLR -273 92 1 820 239 54 43 chr2 97266878 97266995 -153420859 + L1ME LINE L1 1438 1587 -5047 2827 173 61 25 chr2 97266996 97267367 -153420487 + L1MB8 LINE L1 5403 5808 -370 2404 134 45 26 chr2 97267367 97267791 -153420063 - MSTB1 LTR MaLR 0 432 1 2827 173 61 25 chr2 97267791 97268061 -153419793 + L1MB8 LINE L1 5808 6067 -111 2500 82 0 0 chr2 97268064 97268368 -153419486 + AluSc SINE Alu 1 304 -5 287 246 158 18 chr2 97268379 97268493 -153419361 + FLAM_A SINE Alu 1 130 -3 581 125 48 10 chr2 97268514 97268618 -153419236 + L1MB7 LINE L1 6066 6173 -11 1921 111 0 28 chr2 97268674 97268984 -153418870 + AluSx SINE Alu 1 302 0 367 211 53 0 chr2 97269098 97269174 -153418680 - MER82 DNA MER2_type -1 652 573 42056 34 1 1 chr2 97269191 97275341 -153412513 - L1PA3 LINE L1 0 6155 9 1151 193 5 46 chr2 97275346 97275518 -153412336 - MER82 DNA MER2_type -94 559 396 1820 149 0 14 chr2 97275518 97275814 -153412040 - AluJb SINE Alu -20 292 1 1151 193 5 46 chr2 97275814 97275859 -153411995 - MER82 DNA MER2_type -257 396 351 317 217 0 0 chr2 97275866 97275935 -153411919 + L1MB7 LINE L1 6107 6175 -9 475 109 0 0 chr2 97275990 97276054 -153411800 + AluS SINE Alu 2 65 -247 511 152 0 0 chr2 97276094 97276173 -153411681 - MER82 DNA MER2_type -376 277 199 1121 154 28 0 chr2 97276447 97276629 -153411225 - MER82 DNA MER2_type -449 204 18 867 260 36 26 chr2 97276640 97276938 -153410916 + L1M4c LINE L1 1367 1859 -884 2286 53 0 3 chr2 97276938 97277220 -153410634 + AluY SINE Alu 21 301 -10 867 260 36 26 chr2 97277220 97277239 -153410615 + L1M4c LINE L1 1859 1876 -867 1708 92 92 0 chr2 97277257 97277519 -153410335 - L1MA1 LINE L1 0 6302 6017 844 188 75 0 chr2 97278253 97278413 -153409441 - MSTC LTR MaLR 0 428 257 351 235 69 52 chr2 97278464 97278649 -153409205 + MLT1J LTR MaLR 230 448 -63 1867 138 100 26 chr2 97278658 97278998 -153408856 - MLT1A1 LTR MaLR 0 365 1 1568 191 10 10 chr2 97279098 97279397 -153408457 - AluJo SINE Alu -13 299 1 466 312 74 5 chr2 97280052 97280241 -153407613 + MIR SINE MIR 6 207 -55 2276 155 110 70 chr2 97281370 97281898 -153405956 - MER44D DNA MER2_type 0 605 2 22 0 0 0 chr2 97283226 97283248 -153404606 + AT_rich Low_complexity Low_complexity 1 22 0 2204 80 3 7 chr2 97285649 97285948 -153401906 - AluSg SINE Alu -12 298 1 901 176 16 37 chr2 97286646 97286834 -153401020 - AluJo SINE Alu -8 304 121 1261 117 66 0 chr2 97287202 97287422 -153400432 - AluSq SINE Alu 0 307 75 2270 102 0 0 chr2 97287422 97287726 -153400128 - AluSg SINE Alu -6 304 1 299 280 26 111 chr2 97288811 97289000 -153398854 + MER5A DNA MER1_type 16 188 -1 269 222 0 19 chr2 97289935 97289989 -153397865 - L3 LINE CR1 -2 1575 1523 1526 151 86 7 chr2 97290220 97290498 -153397356 + AluJo SINE Alu 1 300 -12 265 213 56 111 chr2 97290581 97290689 -153397165 - L3 LINE CR1 -226 1351 1250 291 306 74 9 chr2 97290888 97290996 -153396858 - L3 LINE CR1 -369 1208 1094 4682 116 7 43 chr2 97291030 97291685 -153396169 - Tigger1 DNA MER2_type -101 2317 1692 1853 149 0 7 chr2 97291685 97291974 -153395880 - AluSx SINE Alu -25 287 1 4682 116 7 43 chr2 97291974 97292079 -153395775 - Tigger1 DNA MER2_type -726 1692 1585 532 206 0 0 chr2 97292079 97292176 -153395678 - FRAM SINE Alu -7 169 73 875 217 6 6 chr2 97292279 97292454 -153395400 + FRAM SINE Alu 1 175 -1 594 75 0 0 chr2 97292492 97292572 -153395282 + (TA)n Simple_repeat Simple_repeat 2 81 0 2078 118 7 7 chr2 97292976 97293281 -153394573 + AluSq SINE Alu 5 309 -4 225 272 72 56 chr2 97293353 97293478 -153394376 - L3 LINE CR1 -764 813 687 1702 174 10 0 chr2 97294399 97294703 -153393151 + AluJo SINE Alu 1 307 -5 2458 47 0 0 chr2 97295554 97295850 -153392004 + AluY SINE Alu 1 296 -15 190 288 14 27 chr2 97295869 97295942 -153391912 - MIR3 SINE MIR -123 85 14 757 130 0 49 chr2 97296209 97296332 -153391522 - FLAM_C SINE Alu -25 118 2 238 271 93 28 chr2 97297552 97297659 -153390195 - MER5B DNA MER1_type 0 178 65 462 175 33 164 chr2 97297727 97297910 -153389944 + MIR SINE MIR 104 262 0 294 333 44 9 chr2 97297913 97298027 -153389827 - MIR3 SINE MIR -45 163 46 2321 69 23 0 chr2 97298388 97298692 -153389162 + AluY SINE Alu 1 311 0 213 217 181 36 chr2 97299434 97299517 -153388337 - MIR SINE MIR 0 262 168 745 140 0 100 chr2 97299699 97299849 -153388005 + FLAM_C SINE Alu 3 137 -6 2097 128 3 0 chr2 97302626 97302931 -153384923 - AluSx SINE Alu -2 310 5 1908 131 7 10 chr2 97304653 97304944 -153382910 + AluSx SINE Alu 15 304 -8 1849 109 35 11 chr2 97305373 97305657 -153382197 + AluSx SINE Alu 1 291 -21 2395 57 0 10 chr2 97305830 97306131 -153381723 + AluY SINE Alu 1 298 -13 637 303 48 41 chr2 97306503 97306817 -153381037 + L2 LINE L2 39 354 -2960 630 217 32 49 chr2 97306820 97307045 -153380809 + MER106B DNA MER1_type 2 233 -3 3168 248 124 59 chr2 97307058 97308448 -153379406 + L2 LINE L2 347 1827 -1487 355 256 50 16 chr2 97308456 97308577 -153379277 - L1MC4 LINE L1 -11 8031 7907 1102 212 251 2 chr2 97308630 97309073 -153378781 + LTR50 LTR ERVL 1 553 -242 572 271 225 9 chr2 97309091 97309309 -153378545 + L2 LINE L2 1962 2226 -1088 256 271 31 21 chr2 97309390 97309486 -153378368 + L1MC5 LINE L1 5629 5725 -2083 630 274 170 5 chr2 97309594 97309806 -153378048 + MIR SINE MIR 11 257 -5 1785 163 3 3 chr2 97310320 97310621 -153377233 + AluSx SINE Alu 1 301 -11 436 293 172 0 chr2 97311763 97311978 -153375876 - MIR SINE MIR -9 253 2 351 297 58 18 chr2 97313163 97313469 -153374385 + L1MC5 LINE L1 7261 7495 -543 494 194 11 0 chr2 97313539 97313632 -153374222 + AluJ/FLAM SINE Alu 2 95 -217 2285 89 3 0 chr2 97313634 97313938 -153373916 + AluSq SINE Alu 3 307 -6 1524 244 159 12 chr2 97313950 97314131 -153373723 - L2 LINE L2 -989 2325 2172 1930 115 0 0 chr2 97314131 97314409 -153373445 + AluSx SINE Alu 33 310 -2 1524 244 159 12 chr2 97314409 97314706 -153373148 - L2 LINE L2 -1142 2172 1777 1788 79 4 0 chr2 97314707 97314948 -153372906 - AluY SINE Alu -6 305 64 195 154 0 0 chr2 97317143 97317182 -153370672 + MIR SINE MIR 81 119 -89 499 246 0 8 chr2 97318166 97318284 -153369570 + MIR SINE MIR 31 147 -115 352 286 111 57 chr2 97318816 97318940 -153368914 + L1M4 LINE L1 4487 4603 -1543 207 0 0 0 chr2 97318940 97318963 -153368891 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2014 94 18 0 chr2 97318965 97319242 -153368612 - AluSx SINE Alu -30 282 1 2212 62 0 0 chr2 97319242 97319501 -153368353 - AluSc SINE Alu -22 287 33 352 286 111 57 chr2 97319501 97319704 -153368150 + L1M4 LINE L1 4602 4836 -1310 467 162 216 10 chr2 97320742 97320888 -153366966 + MER5B DNA MER1_type 3 189 0 259 192 58 0 chr2 97320895 97320947 -153366907 - MIR SINE MIR -84 124 70 183 346 115 0 chr2 97321119 97321197 -153366657 - MIR3 SINE MIR -25 183 97 191 180 20 40 chr2 97321436 97321486 -153366368 + MIR SINE MIR 95 143 -119 11052 119 36 13 chr2 97321516 97323312 -153364542 + Tigger1 DNA MER2_type 1 1837 -581 360 148 0 0 chr2 97323312 97323373 -153364481 + (T)n Simple_repeat Simple_repeat 1 61 0 1291 145 90 33 chr2 97323617 97323681 -153364173 - MLT1D LTR MaLR 0 626 567 2374 97 0 3 chr2 97323681 97323989 -153363865 + AluY SINE Alu 1 307 -4 1291 145 90 33 chr2 97323989 97324345 -153363509 - MLT1D LTR MaLR -59 567 1 530 263 34 69 chr2 97324393 97324568 -153363286 - L2 LINE L2 -1759 1555 1387 2182 103 4 0 chr2 97324579 97324860 -153362994 + AluSx SINE Alu 14 295 -17 258 179 60 0 chr2 97324863 97324930 -153362924 - L2 LINE L2 -2390 924 854 665 184 103 0 chr2 97324936 97325072 -153362782 + FAM SINE Alu 18 167 -18 2548 68 3 0 chr2 97325074 97325383 -153362471 + AluY SINE Alu 1 310 -1 717 259 187 60 chr2 97325679 97326181 -153361673 + L2 LINE L2 1795 2360 -954 268 259 116 9 chr2 97326232 97326344 -153361510 + L2 LINE L2 2863 2986 -327 21 0 0 0 chr2 97326761 97326782 -153361072 + GC_rich Low_complexity Low_complexity 1 21 0 2569 68 0 0 chr2 97327260 97327568 -153360286 - AluSq SINE Alu -5 308 1 2520 83 3 0 chr2 97328209 97328510 -153359344 - AluSq SINE Alu -11 302 1 559 327 93 37 chr2 97328979 97329410 -153358444 + L2 LINE L2 2818 3272 0 260 127 73 55 chr2 97329435 97329490 -153358364 + MIR SINE MIR 91 146 -116 2413 82 0 31 chr2 97329924 97330243 -153357611 + AluY SINE Alu 1 309 -2 2354 114 3 3 chr2 97330638 97330946 -153356908 - AluSp SINE Alu -4 309 2 840 239 35 15 chr2 97331157 97331354 -153356500 + MIR SINE MIR 59 259 -3 2379 99 3 6 chr2 97331613 97331925 -153355929 - AluSx SINE Alu -1 311 1 1991 153 26 13 chr2 97332513 97332821 -153355033 - AluJb SINE Alu 0 312 1 405 0 0 0 chr2 97333596 97333641 -153354213 + (TA)n Simple_repeat Simple_repeat 2 46 0 2089 118 3 7 chr2 97333642 97333938 -153353916 - AluSx SINE Alu -17 295 1 2117 131 7 7 chr2 97338240 97338545 -153349309 - AluSx SINE Alu -7 305 1 4869 112 23 33 chr2 97338866 97339068 -153348786 - L1MA5A LINE L1 -3 6294 6092 1804 126 52 4 chr2 97339068 97339338 -153348516 - AluSx SINE Alu -29 283 1 4869 112 23 33 chr2 97339338 97339946 -153347908 - L1MA5A LINE L1 -205 6092 5492 1305 76 0 76 chr2 97340006 97340191 -153347663 + AluSx SINE Alu 1 171 -141 1712 88 0 54 chr2 97340191 97340430 -153347424 + AluSg/x SINE Alu 82 307 -3 382 293 139 5 chr2 97341506 97341708 -153346146 + MIR SINE MIR 4 230 -32 2423 106 3 0 chr2 97342438 97342750 -153345104 + AluSq SINE Alu 1 313 0 885 136 23 0 chr2 97342765 97342897 -153344957 + BC200 scRNA scRNA 3 137 -63 1610 206 7 0 chr2 97343086 97343383 -153344471 - AluJb SINE Alu 0 303 5 1105 245 97 21 chr2 97343458 97343879 -153343975 + HAL1 LINE L1 1056 1508 -999 472 184 0 31 chr2 97343884 97343982 -153343872 - AluSx SINE Alu -1 308 214 1333 94 0 0 chr2 97343982 97344152 -153343702 - AluSx SINE Alu -142 170 1 2031 123 7 0 chr2 97344201 97344486 -153343368 + AluSq SINE Alu 24 310 -3 629 189 0 0 chr2 97344494 97344616 -153343238 + HAL1 LINE L1 1540 1661 -846 2255 110 0 3 chr2 97344625 97344917 -153342937 + AluSq SINE Alu 1 291 -22 1575 113 5 9 chr2 97345222 97345443 -153342411 - AluSg/x SINE Alu -11 299 80 251 286 229 9 chr2 97345766 97345871 -153341983 - MIR SINE MIR -37 225 98 1663 145 7 68 chr2 97345902 97346212 -153341642 + AluJo SINE Alu 11 301 -11 462 210 180 14 chr2 97346834 97347158 -153340696 - HERVL40 LTR ERVL -4140 1390 913 1837 224 58 16 chr2 97347188 97347634 -153340220 - LTR40c LTR ERVL 0 465 1 2233 107 7 23 chr2 97347817 97348126 -153339728 + AluSx SINE Alu 1 304 -8 745 245 112 53 chr2 97348173 97348436 -153339418 - Tigger8 DNA MER2_type -112 554 261 1605 179 54 14 chr2 97348436 97348553 -153339301 + AluJo SINE Alu 1 112 -200 191 32 65 0 chr2 97348553 97348584 -153339270 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 1605 179 54 14 chr2 97348584 97348745 -153339109 + AluJo SINE Alu 112 290 -22 745 245 112 53 chr2 97348745 97348857 -153338997 - Tigger8 DNA MER2_type -405 261 157 877 150 0 36 chr2 97349135 97349275 -153338579 - FLAM_C SINE Alu -8 135 1 508 139 14 0 chr2 97349303 97349375 -153338479 + AluS SINE Alu 2 74 -238 483 301 81 12 chr2 97349410 97349656 -153338198 - MARNA DNA Mariner -198 388 126 508 250 157 0 chr2 97349701 97349841 -153338013 - MIR SINE MIR -87 175 14 634 70 0 0 chr2 97349945 97350031 -153337823 - MER83 LTR ERV1 -362 86 1 420 250 122 41 chr2 97350109 97350281 -153337573 + MIR SINE MIR 60 245 -17 868 152 0 14 chr2 97350711 97350856 -153336998 - FAM SINE Alu -1 48 1 1891 152 3 7 chr2 97351257 97351547 -153336307 + AluJo SINE Alu 1 289 -23 1135 223 17 103 chr2 97351550 97351593 -153336261 - L1MB7 LINE L1 -2 6182 6137 2205 123 0 7 chr2 97351593 97351901 -153335953 - AluSc SINE Alu -3 306 1 1135 223 17 103 chr2 97351901 97351933 -153335921 - L1MB7 LINE L1 -47 6137 6104 1745 173 7 11 chr2 97351933 97352248 -153335606 + AluJo SINE Alu 1 314 0 1135 223 17 103 chr2 97352248 97352510 -153335344 - L1MB7 LINE L1 -80 6104 5821 1816 156 7 20 chr2 97352510 97352811 -153335043 - AluJo SINE Alu -15 297 1 1135 223 17 103 chr2 97352811 97352826 -153335028 - L1MB7 LINE L1 -363 5821 5872 2035 114 7 37 chr2 97352826 97353006 -153334848 - AluSx SINE Alu -24 288 119 2381 90 7 0 chr2 97353006 97353306 -153334548 + AluSx SINE Alu 1 302 -10 2035 114 7 37 chr2 97353306 97353422 -153334432 - AluSx SINE Alu -193 119 1 1135 223 17 103 chr2 97353422 97353474 -153334380 - L1MB7 LINE L1 -311 5873 5818 1163 139 15 0 chr2 97353635 97353837 -153334017 - L1MB7 LINE L1 -382 5802 5598 1173 125 19 0 chr2 97353837 97353997 -153333857 - AluSg/x SINE Alu -16 296 134 2161 126 7 0 chr2 97353997 97354306 -153333548 - AluSq SINE Alu -2 311 1 531 79 13 0 chr2 97354306 97354382 -153333472 - L1MB7 LINE L1 -747 5399 5323 1959 133 13 13 chr2 97354392 97354692 -153333162 + AluJb SINE Alu 11 310 -2 1871 172 3 3 chr2 97354966 97355263 -153332591 - AluJo SINE Alu -15 297 1 352 272 0 0 chr2 97355331 97355412 -153332442 + MIR3 SINE MIR 116 196 -12 514 240 48 91 chr2 97355680 97355780 -153332074 - MIR SINE MIR -10 252 164 2274 101 3 7 chr2 97355780 97356076 -153331778 - AluSx SINE Alu -17 295 1 514 240 48 91 chr2 97356076 97356183 -153331671 - MIR SINE MIR -98 164 54 353 295 62 31 chr2 97356236 97356460 -153331394 - MER102a DNA MER1_type -8 322 92 2405 87 3 0 chr2 97359022 97359322 -153328532 - AluSx SINE Alu -11 301 1 2616 179 62 14 chr2 97359776 97360475 -153327379 + MER21B LTR ERV1 1 842 -21 665 259 107 22 chr2 97360619 97360843 -153327011 - MIR SINE MIR -11 251 9 2359 57 3 14 chr2 97362154 97362451 -153325403 - AluY SINE Alu -17 294 1 21 0 0 0 chr2 97362453 97362474 -153325380 + AT_rich Low_complexity Low_complexity 1 21 0 307 267 204 28 chr2 97362815 97362991 -153324863 + MIR3 SINE MIR 1 207 -1 1687 178 54 0 chr2 97366790 97367066 -153320788 - AluJb SINE Alu -21 291 1 2145 104 4 0 chr2 97367687 97368000 -153319854 - AluSg SINE Alu 0 314 1 266 51 0 26 chr2 97368043 97368082 -153319772 - U2 snRNA snRNA -150 38 1 658 217 23 0 chr2 97368351 97368480 -153319374 + MER58B DNA MER1_type 181 312 -29 2163 105 3 14 chr2 97368480 97368776 -153319078 - AluSq SINE Alu -20 293 1 382 269 194 8 chr2 97368885 97369019 -153318835 + MER5A DNA MER1_type 31 189 0 663 275 31 38 chr2 97370025 97370316 -153317538 + L1M4 LINE L1 3243 3531 -2615 338 330 62 58 chr2 97376949 97377207 -153310647 - MIR SINE MIR -3 259 1 2579 72 0 0 chr2 97377878 97378184 -153309670 + AluSq SINE Alu 1 306 -7 340 274 26 44 chr2 97379837 97379950 -153307904 - MIR SINE MIR -38 224 114 2232 118 102 8 chr2 97380042 97380433 -153307421 - MSTA LTR MaLR 0 428 1 2305 109 0 7 chr2 97381460 97381764 -153306090 + AluSx SINE Alu 2 303 -9 1983 112 32 64 chr2 97381766 97382079 -153305775 + AluSq SINE Alu 3 305 -8 2400 89 0 0 chr2 97382080 97382372 -153305482 + AluSg SINE Alu 1 292 -18 1856 173 7 3 chr2 97382412 97382713 -153305141 - AluJb SINE Alu -10 302 1 956 205 0 0 chr2 97382863 97383029 -153304825 + AluJb SINE Alu 142 307 -5 2312 90 7 3 chr2 97386207 97386508 -153301346 + AluSg SINE Alu 1 302 -8 2541 47 0 13 chr2 97386908 97387208 -153300646 - AluY SINE Alu -15 296 1 1625 185 143 47 chr2 97388686 97388871 -153298983 - Charlie1 DNA MER1_type -1 2760 2594 824 168 0 0 chr2 97388871 97389002 -153298852 - FLAM_C SINE Alu -2 131 1 1625 185 143 47 chr2 97389002 97389242 -153298612 - Charlie1 DNA MER1_type -167 2594 2378 2487 75 0 3 chr2 97389242 97389547 -153298307 - AluSg SINE Alu -6 304 1 1625 185 143 47 chr2 97389547 97390103 -153297751 - Charlie1 DNA MER1_type -383 2378 1568 2400 86 3 0 chr2 97390103 97390394 -153297460 - AluSp SINE Alu -15 298 7 1625 185 143 47 chr2 97390394 97390506 -153297348 - Charlie1 DNA MER1_type -1193 1568 1468 321 176 27 54 chr2 97390504 97390578 -153297276 - Charlie1 DNA MER1_type -2688 73 2 * 523 210 176 34 chr2 97390733 97390909 -153296945 - MER106A DNA MER1_type 0 236 36 308 293 148 84 chr2 97392036 97392096 -153295758 - L1ME4a LINE L1 -216 5905 5850 2349 108 0 3 chr2 97392096 97392401 -153295453 - AluSx SINE Alu -8 304 1 2320 85 14 0 chr2 97392410 97392703 -153295151 - AluSg SINE Alu -13 297 1 308 293 148 84 chr2 97392703 97392895 -153294959 - L1ME4a LINE L1 -278 5843 5626 2494 76 7 0 chr2 97392984 97393286 -153294568 + AluY SINE Alu 2 305 -6 2251 115 10 0 chr2 97394551 97394856 -153292998 - AluSq SINE Alu -5 308 1 2419 81 7 3 chr2 97395767 97396075 -153291779 - AluSq SINE Alu -4 309 1 282 230 69 23 chr2 97399176 97399263 -153288591 - MIR SINE MIR -82 126 36 1442 78 0 31 chr2 97399378 97399571 -153288283 + AluSq SINE Alu 120 306 -7 2070 109 0 40 chr2 97399581 97399884 -153287970 + AluSx SINE Alu 13 303 -9 2110 119 27 0 chr2 97399949 97400243 -153287611 + AluSx SINE Alu 1 302 -10 2242 109 7 10 chr2 97400646 97400949 -153286905 - AluSx SINE Alu -10 302 1 218 325 81 8 chr2 97401074 97401197 -153286657 - MIR SINE MIR -39 223 92 1010 158 0 47 chr2 97401480 97401651 -153286203 + FRAM SINE Alu 1 163 -13 340 292 71 9 chr2 97403137 97403250 -153284604 - MIR SINE MIR -96 166 47 219 259 103 35 chr2 97403562 97403678 -153284176 + MIR SINE MIR 12 135 -127 451 302 56 11 chr2 97404650 97404829 -153283025 + MER5A DNA MER1_type 1 187 -2 2185 120 7 3 chr2 97405004 97405295 -153282559 - AluSx SINE Alu -20 292 1 2511 74 3 0 chr2 97405436 97405745 -153282109 - AluSx SINE Alu 0 312 3 516 257 108 36 chr2 97405952 97406201 -153281653 - HAL1 LINE L1 -2229 278 12 1219 173 73 67 chr2 97406284 97406336 -153281518 - L1MB3 LINE L1 0 6183 6133 2340 93 7 0 chr2 97406336 97406636 -153281218 - AluSp SINE Alu -11 302 1 2438 91 0 0 chr2 97406640 97406936 -153280918 - AluSc SINE Alu -13 296 1 1558 168 27 8 chr2 97406940 97407196 -153280658 - AluJo SINE Alu -16 296 36 1219 173 73 67 chr2 97407196 97407463 -153280391 - L1MB3 LINE L1 -54 6129 5852 2319 103 0 16 chr2 97411380 97411691 -153276163 - AluSx SINE Alu -6 306 1 22 0 0 0 chr2 97411997 97412019 -153275835 + AT_rich Low_complexity Low_complexity 1 22 0 252 315 150 52 chr2 97412390 97412676 -153275178 - L2 LINE L2 -44 3228 2915 624 162 27 0 chr2 97413334 97413445 -153274409 - FLAM_C SINE Alu -24 119 6 2317 75 11 0 chr2 97413531 97413809 -153274045 + AluSc SINE Alu 1 281 -28 338 0 24 0 chr2 97413809 97413851 -153274003 + (CA)n Simple_repeat Simple_repeat 2 44 0 2315 119 0 0 chr2 97414413 97414715 -153273139 - AluSx SINE Alu -10 302 1 262 111 0 37 chr2 97414798 97414852 -153273002 + (TTTC)n Simple_repeat Simple_repeat 1 52 0 1286 163 41 9 chr2 97414866 97415087 -153272767 - AluJb SINE Alu -1 311 84 2079 101 3 74 chr2 97415168 97415494 -153272360 - AluSx SINE Alu -9 303 1 538 238 267 26 chr2 97415869 97416172 -153271682 - MLT1K LTR MaLR -7 581 206 1366 233 87 34 chr2 97416852 97417346 -153270508 - MLT2B1 LTR ERVL 0 520 1 2477 100 0 0 chr2 97417439 97417748 -153270106 + AluSx SINE Alu 3 311 -1 322 287 70 0 chr2 97417876 97417991 -153269863 + MIR3 SINE MIR 83 205 -3 813 175 0 7 chr2 97418063 97418200 -153269654 + FAM SINE Alu 20 155 -30 2232 123 13 0 chr2 97418200 97418508 -153269346 - AluSp SINE Alu -1 312 1 1381 107 0 5 chr2 97418531 97418727 -153269127 - L1PB1 LINE L1 0 6151 5957 1608 155 0 4 chr2 97418757 97419015 -153268839 + AluSx SINE Alu 52 308 -4 2209 127 3 0 chr2 97419039 97419346 -153268508 + AluSx SINE Alu 1 308 -4 3396 177 79 44 chr2 97419540 97420359 -153267495 + L1MB7 LINE L1 4653 5719 -465 2072 121 17 7 chr2 97420359 97420656 -153267198 - AluSq SINE Alu -13 300 1 3396 177 79 44 chr2 97420656 97421115 -153266739 + L1MB7 LINE L1 5719 6160 -24 2190 100 4 0 chr2 97421262 97421572 -153266282 - AluSx SINE Alu 0 312 2 522 0 0 0 chr2 97421572 97421630 -153266224 + (TTTTA)n Simple_repeat Simple_repeat 2 59 0 1682 91 5 0 chr2 97421630 97421839 -153266015 - AluSp SINE Alu -30 283 74 2011 111 57 13 chr2 97422230 97422528 -153265326 + AluJb SINE Alu 1 311 -1 291 268 268 40 chr2 97422558 97422957 -153264897 - L1MC4a LINE L1 -479 5642 5450 303 229 37 28 chr2 97422984 97423093 -153264761 - L1MC4a LINE L1 -747 5399 5290 627 275 57 31 chr2 97423118 97423347 -153264507 + L2 LINE L2 3079 3313 0 2431 97 0 6 chr2 97423385 97423696 -153264158 - AluSq SINE Alu -4 309 1 1942 112 118 6 chr2 97423811 97424134 -153263720 - L1PA15 LINE L1 -13 6152 5794 261 0 0 0 chr2 97425274 97425303 -153262551 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 21 36 0 0 chr2 97425761 97425789 -153262065 + AT_rich Low_complexity Low_complexity 1 28 0 378 114 0 29 chr2 97426008 97426078 -153261776 + AluJb SINE Alu 69 136 -166 1061 190 105 8 chr2 97427323 97427570 -153260284 + MER68 LTR ERV1 1 271 -291 2191 109 0 0 chr2 97427575 97427884 -153259970 + AluSx SINE Alu 1 309 0 1881 134 4 7 chr2 97427892 97428168 -153259686 + AluSx SINE Alu 1 275 -37 225 0 0 0 chr2 97428168 97428193 -153259661 + (T)n Simple_repeat Simple_repeat 1 25 0 211 206 0 63 chr2 97428376 97428439 -153259415 + (GGGTG)n Simple_repeat Simple_repeat 3 61 0 392 252 151 14 chr2 97428847 97428986 -153258868 - MIR SINE MIR -5 257 100 2782 87 107 13 chr2 97429063 97429098 -153258756 - MER1A DNA MER1_type -2173 529 499 2338 112 0 0 chr2 97429098 97429402 -153258452 - AluSq SINE Alu -9 304 1 2782 87 107 13 chr2 97429402 97429816 -153258038 - MER1A DNA MER1_type -2203 499 38 1392 109 6 0 chr2 97432899 97433082 -153254772 - AluSp SINE Alu -129 184 1 2100 106 3 34 chr2 97433109 97433447 -153254407 + AluSq SINE Alu 1 329 0 1856 163 7 3 chr2 97433456 97433756 -153254098 - AluJb SINE Alu -11 301 1 257 284 15 0 chr2 97433763 97433830 -153254024 + MER68 LTR ERV1 275 342 -220 2355 103 0 3 chr2 97433930 97434232 -153253622 + AluSx SINE Alu 1 301 -11 1102 243 55 38 chr2 97434332 97434841 -153253013 + L1MC5 LINE L1 6431 6932 -876 2263 103 3 7 chr2 97434843 97435145 -153252709 - AluSx SINE Alu -11 301 1 1291 161 14 5 chr2 97435145 97435356 -153252498 - AluJb SINE Alu -7 305 93 1964 149 7 3 chr2 97435389 97435678 -153252176 + AluJb SINE Alu 1 290 -22 554 191 47 93 chr2 97435683 97435919 -153251935 + L1MC5 LINE L1 7701 7925 -36 225 269 128 0 chr2 97436714 97436792 -153251062 + MER5A DNA MER1_type 1 88 -101 746 188 15 0 chr2 97437146 97437279 -153250575 + AluJb SINE Alu 2 136 -176 1515 184 41 20 chr2 97438750 97439043 -153248811 + AluJo SINE Alu 8 306 -6 605 263 76 36 chr2 97439049 97439350 -153248504 + L1MC4 LINE L1 7592 7904 -138 202 345 11 35 chr2 97439378 97439465 -153248389 - MIR SINE MIR -56 206 122 1273 196 55 0 chr2 97440775 97441046 -153246808 - L1MB2 LINE L1 -27 6144 5859 1606 106 197 8 chr2 97441111 97441365 -153246489 - AluSg1 SINE Alu -7 302 1 2166 102 3 32 chr2 97441368 97441681 -153246173 - AluSg SINE Alu -2 308 5 775 126 16 0 chr2 97441755 97441882 -153245972 - L1MA9 LINE L1 0 6312 6184 286 195 149 0 chr2 97442340 97442427 -153245427 + L1ME3A LINE L1 6062 6161 -9 381 256 73 6 chr2 97442786 97442950 -153244904 + G-rich Low_complexity Low_complexity 5 179 0 660 147 0 28 chr2 97444040 97444149 -153243705 - FLAM_A SINE Alu -20 122 17 2335 68 31 0 chr2 97444346 97444638 -153243216 + AluY SINE Alu 1 301 -10 446 231 159 53 chr2 97445039 97445359 -153242495 + LTR16A1 LTR ERVL 11 364 -93 3697 217 38 16 chr2 97446824 97447782 -153240072 - L1M4 LINE L1 -1436 4710 3732 1609 170 36 18 chr2 97447798 97448075 -153239779 - AluJb SINE Alu -21 291 10 25 0 0 0 chr2 97448344 97448369 -153239485 + AT_rich Low_complexity Low_complexity 1 25 0 695 246 0 0 chr2 97448394 97448520 -153239334 - FLAM_A SINE Alu -7 126 1 228 344 45 51 chr2 97448769 97448926 -153238928 + L2 LINE L2 3117 3272 0 1593 167 20 46 chr2 97448998 97449303 -153238551 + AluJb SINE Alu 1 297 -15 1097 142 51 0 chr2 97449328 97449504 -153238350 + AluSg/x SINE Alu 103 287 -25 265 292 56 0 chr2 97449604 97449676 -153238178 + MIR SINE MIR 38 113 -95 350 221 23 12 chr2 97450068 97450154 -153237700 + LTR67 LTR ERVL 464 550 -7 417 163 200 0 chr2 97450373 97450453 -153237401 - FLAM_A SINE Alu -46 96 1 1850 145 7 30 chr2 97451386 97451682 -153236172 + AluSx SINE Alu 1 289 -23 1637 147 0 26 chr2 97451704 97451976 -153235878 + AluSx SINE Alu 29 293 -19 2046 101 4 11 chr2 97451980 97452258 -153235596 + AluSg SINE Alu 3 278 -32 189 0 0 0 chr2 97452283 97452304 -153235550 + (CAGGA)n Simple_repeat Simple_repeat 2 22 0 2862 3 0 3 chr2 97454388 97454694 -153233160 + AluY SINE Alu 1 305 -6 1210 119 109 0 chr2 97457085 97457287 -153230567 + LTR8 LTR ERV1 4 227 -464 279 0 0 0 chr2 97457387 97457418 -153230436 + (A)n Simple_repeat Simple_repeat 1 31 0 194 235 99 0 chr2 97457499 97457580 -153230274 - L2 LINE L2 -1611 1703 1615 2613 66 0 0 chr2 97457672 97457975 -153229879 - AluSx SINE Alu -9 303 1 23 0 0 0 chr2 97457985 97458008 -153229846 + AT_rich Low_complexity Low_complexity 1 23 0 1819 118 57 4 chr2 97458347 97458635 -153229219 + AluSx SINE Alu 5 306 0 4306 113 40 53 chr2 97459442 97459606 -153228248 - LTR8 LTR ERV1 0 691 526 2083 123 0 23 chr2 97459606 97459906 -153227948 - AluSx SINE Alu -13 299 7 4306 113 40 53 chr2 97459906 97459925 -153227929 - LTR8 LTR ERV1 -165 526 508 2161 124 13 0 chr2 97459925 97460223 -153227631 - AluSx SINE Alu -10 302 1 4306 113 40 53 chr2 97460223 97460738 -153227116 - LTR8 LTR ERV1 -183 508 1 5433 119 19 15 chr2 97460738 97461322 -153226532 - HUERS-P1 LTR ERV1 0 6263 5674 2122 135 0 3 chr2 97461322 97461618 -153226236 - AluSg SINE Alu -15 295 1 5433 119 19 15 chr2 97461618 97461895 -153225959 - HUERS-P1 LTR ERV1 -589 5674 5399 2533 60 0 10 chr2 97461921 97462223 -153225631 - AluY SINE Alu -12 299 1 4253 122 77 32 chr2 97462309 97463061 -153224793 - HUERS-P1 LTR ERV1 -5477 786 1 2563 137 30 17 chr2 97463061 97463520 -153224334 - LTR8 LTR ERV1 0 691 227 998 153 6 24 chr2 97463661 97463831 -153224023 + AluSg/x SINE Alu 136 302 -10 722 132 113 57 chr2 97463872 97464031 -153223823 + AluSg/x SINE Alu 127 294 -16 647 253 157 53 chr2 97464031 97464446 -153223408 - HAL1 LINE L1 -41 2466 2009 227 135 0 0 chr2 97464568 97464605 -153223249 - Alu SINE Alu -11 297 261 276 30 0 0 chr2 97464607 97464640 -153223214 + (TC)n Simple_repeat Simple_repeat 2 34 0 236 91 0 0 chr2 97464651 97464684 -153223170 - Alu SINE Alu -15 286 254 225 128 0 0 chr2 97464710 97464749 -153223105 - Alu SINE Alu -9 157 119 300 27 0 0 chr2 97464753 97464790 -153223064 + (TG)n Simple_repeat Simple_repeat 2 38 0 1016 122 7 0 chr2 97464790 97464937 -153222917 - AluSg/x SINE Alu -28 282 135 1670 150 26 7 chr2 97464970 97465292 -153222562 + AluSx SINE Alu 6 332 0 1551 70 47 51 chr2 97465374 97465454 -153222400 - AluSq SINE Alu -99 214 135 2620 55 0 3 chr2 97465454 97465763 -153222091 - AluY SINE Alu -3 308 1 1551 70 47 51 chr2 97465763 97465897 -153221957 - AluSq SINE Alu -178 135 1 627 229 191 13 chr2 97465900 97466220 -153221634 - HAL1 LINE L1 -1402 1105 729 621 268 113 23 chr2 97466207 97466509 -153221345 - HAL1 LINE L1 -2133 374 46 * 228 329 0 0 chr2 97466553 97466632 -153221222 - L1MA10 LINE L1 0 6334 6256 2586 226 83 25 chr2 97466649 97467153 -153220701 - L1ME2 LINE L1 -48 6116 5550 2207 100 0 13 chr2 97467153 97467464 -153220390 - AluSx SINE Alu -5 307 1 2586 226 83 25 chr2 97467464 97467732 -153220122 - L1ME2 LINE L1 -614 5550 5299 2477 174 23 37 chr2 97467776 97468100 -153219754 - L1MB7 LINE L1 -62 6122 5806 1932 138 3 0 chr2 97468100 97468390 -153219464 - AluSx SINE Alu -15 297 7 2477 174 23 37 chr2 97468390 97468582 -153219272 - L1MB7 LINE L1 -378 5806 5613 2353 226 100 16 chr2 97468582 97469251 -153218603 - MER50 LTR ERV1 0 734 10 1714 182 43 27 chr2 97469251 97469664 -153218190 - L1MB7 LINE L1 -552 5622 5217 1863 124 25 7 chr2 97469664 97469973 -153217881 - AluSg SINE Alu 0 310 2 1714 182 43 27 chr2 97469973 97470068 -153217786 - L1MB7 LINE L1 -957 5217 5125 2272 112 0 0 chr2 97470068 97470372 -153217482 - AluSc SINE Alu -5 304 1 1714 182 43 27 chr2 97470372 97470530 -153217324 - L1MB7 LINE L1 -1049 5125 4957 430 286 42 91 chr2 97470658 97470757 -153217097 - L1MC/D LINE L1 -639 5603 5501 1975 153 3 0 chr2 97470757 97471064 -153216790 - AluSx SINE Alu -4 308 1 430 286 42 91 chr2 97471064 97471242 -153216612 - L1MC/D LINE L1 -741 5501 5348 1974 112 0 59 chr2 97471242 97471563 -153216291 - AluSx SINE Alu -10 302 1 430 286 42 91 chr2 97471563 97471643 -153216211 - L1MC/D LINE L1 -894 5348 5266 26 64 0 0 chr2 97471646 97471693 -153216161 + AT_rich Low_complexity Low_complexity 1 47 0 1916 124 31 3 chr2 97473792 97474082 -153213772 + AluSx SINE Alu 1 298 -14 1819 134 7 7 chr2 97474089 97474366 -153213488 + AluSq SINE Alu 1 277 -36 293 200 67 67 chr2 97474386 97474476 -153213378 + L1MD2 LINE L1 6033 6122 -237 1875 122 27 3 chr2 97474483 97474777 -153213077 - AluSg SINE Alu -9 301 1 2324 77 7 0 chr2 97474790 97475089 -153212765 - AluSp SINE Alu -11 302 2 2311 77 0 7 chr2 97475101 97475401 -153212453 - AluY SINE Alu -13 298 1 357 292 185 20 chr2 97475805 97476158 -153211696 - L1MC4 LINE L1 0 8042 7616 2171 114 0 0 chr2 97476158 97476456 -153211398 - AluSx SINE Alu -14 298 1 357 292 185 20 chr2 97476456 97476496 -153211358 - L1MC4 LINE L1 -426 7616 7584 361 198 198 0 chr2 97476534 97476625 -153211229 + MER5B DNA MER1_type 1 109 -69 183 311 0 0 chr2 97476736 97476781 -153211073 - L3 LINE CR1 -615 962 918 * 494 184 195 32 chr2 97476779 97476964 -153210890 - MIR SINE MIR 0 262 48 181 0 69 0 chr2 97477117 97477146 -153210708 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 323 125 54 4 chr2 97477154 97477213 -153210641 - MER4E LTR ERV1 -70 594 527 1452 179 42 14 chr2 97477220 97477505 -153210349 - AluJo SINE Alu -19 293 1 1335 187 70 4 chr2 97477527 97477800 -153210054 - AluJb SINE Alu -19 293 3 22 0 0 0 chr2 97478358 97478380 -153209474 + AT_rich Low_complexity Low_complexity 1 22 0 2185 102 0 0 chr2 97478401 97478695 -153209159 - AluSg1 SINE Alu -15 294 1 2064 112 0 16 chr2 97478758 97479061 -153208793 + AluSq SINE Alu 1 298 -15 325 273 166 0 chr2 97479128 97479267 -153208587 - MLT1J LTR MaLR -8 503 342 431 170 43 11 chr2 97479297 97479391 -153208463 + MER5B DNA MER1_type 82 178 0 569 201 181 0 chr2 97479433 97479577 -153208277 + MIR SINE MIR 80 249 -13 272 296 28 0 chr2 97479595 97479666 -153208188 - L3 LINE CR1 -428 1149 1077 724 234 176 0 chr2 97479742 97479986 -153207868 - MLT1J LTR MaLR -222 289 3 2288 87 0 3 chr2 97480298 97480598 -153207256 - AluSc SINE Alu -5 304 6 2040 113 17 0 chr2 97480977 97481279 -153206575 + AluSx SINE Alu 1 307 -5 216 0 0 0 chr2 97481662 97481686 -153206168 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1970 126 0 0 chr2 97481694 97481971 -153205883 - AluSx SINE Alu -35 277 1 230 329 171 0 chr2 97482108 97482248 -153205606 - MIR3 SINE MIR -21 187 24 2280 159 105 14 chr2 97482366 97482794 -153205060 - MLT1C LTR MaLR 0 467 1 821 122 89 0 chr2 97483826 97483949 -153203905 - AluSg/x SINE Alu -15 297 164 1176 181 8 51 chr2 97484099 97484353 -153203501 - AluJo SINE Alu -45 267 25 261 144 52 134 chr2 97484366 97484417 -153203437 - L1M4 LINE L1 -814 5332 5291 1514 149 76 0 chr2 97484417 97484692 -153203162 - AluSx SINE Alu -16 296 1 261 144 52 134 chr2 97484692 97484737 -153203117 - L1M4 LINE L1 -855 5291 5244 423 273 146 41 chr2 97484954 97485437 -153202417 - MLT1K LTR MaLR 0 588 11 1832 148 0 14 chr2 97485635 97485926 -153201928 + AluJo SINE Alu 1 287 -25 1112 241 71 60 chr2 97487828 97488248 -153199606 - LTR16A LTR ERVL 0 450 26 1630 180 34 3 chr2 97488427 97488721 -153199133 - AluJb SINE Alu -7 305 3 2088 110 3 16 chr2 97488732 97489040 -153198814 - AluSx SINE Alu -5 307 4 4546 340 56 41 chr2 97489295 97491886 -153195968 - ERVL LTR ERVL -823 4941 2310 2049 121 3 7 chr2 97491886 97492183 -153195671 - AluSx SINE Alu -16 296 1 4546 340 56 41 chr2 97492183 97492203 -153195651 - ERVL LTR ERVL -3454 2310 2292 428 164 114 43 chr2 97492272 97492358 -153195496 - L2 LINE L2 -1797 1517 1416 1763 144 23 33 chr2 97492358 97492663 -153195191 - AluJb SINE Alu -10 302 1 428 164 114 43 chr2 97492663 97492716 -153195138 - L2 LINE L2 -1898 1416 1368 418 292 103 11 chr2 97493064 97493249 -153194605 - LTR16B LTR ERVL -7 457 256 682 192 32 0 chr2 97493249 97493374 -153194480 - FLAM_A SINE Alu -4 129 1 322 323 146 37 chr2 97496839 97497189 -153190665 + L1ME LINE L1 2656 3043 -3103 661 273 158 31 chr2 97498757 97499326 -153188528 + L1ME LINE L1 3969 4464 -1700 1847 134 0 0 chr2 97499326 97499594 -153188260 - AluSx SINE Alu -6 306 39 661 273 158 31 chr2 97499594 97500142 -153187712 + L1ME LINE L1 4464 4941 -1223 2093 104 10 0 chr2 97500142 97500439 -153187415 - AluSq SINE Alu -13 300 1 661 273 158 31 chr2 97500439 97500514 -153187340 + L1ME LINE L1 4941 5005 -1159 1802 153 7 13 chr2 97500514 97500822 -153187032 + AluSx SINE Alu 1 306 -6 661 273 158 31 chr2 97500822 97501113 -153186741 + L1ME LINE L1 5005 5643 -521 2997 180 121 11 chr2 97501144 97501519 -153186335 - L1MB8 LINE L1 -166 6012 5680 2245 97 0 0 chr2 97501519 97501809 -153186045 - AluSg SINE Alu -15 295 6 2997 180 121 11 chr2 97501809 97502429 -153185425 - L1MB8 LINE L1 -498 5680 4910 1204 151 5 0 chr2 97502543 97502729 -153185125 - AluSx SINE Alu -125 187 1 279 310 163 33 chr2 97506444 97506689 -153181165 - L2 LINE L2 0 3272 2996 2615 112 34 30 chr2 97506821 97507176 -153180678 - L1P4 LINE L1 -488 5677 5308 2009 121 6 19 chr2 97507176 97507491 -153180363 - AluSx SINE Alu -1 311 1 2615 112 34 30 chr2 97507491 97507779 -153180075 - L1P4 LINE L1 -857 5308 5023 589 197 68 14 chr2 97508000 97508147 -153179707 - MER90 LTR ERV1 -2 612 458 269 279 124 31 chr2 97508348 97508574 -153179280 - LTR33 LTR ERVL -272 249 3 352 263 0 0 chr2 97508577 97508653 -153179201 + L2 LINE L2 3238 3313 0 288 182 91 0 chr2 97510367 97510433 -153177421 + MIR3 SINE MIR 101 172 -36 204 336 44 0 chr2 97510535 97510672 -153177182 - L2 LINE L2 -178 3094 2952 2151 103 0 10 chr2 97511706 97512006 -153175848 - AluY SINE Alu -14 297 1 227 315 19 9 chr2 97513106 97513214 -153174640 + GA-rich Low_complexity Low_complexity 2 110 0 185 62 83 0 chr2 97513852 97513900 -153173954 + (TG)n Simple_repeat Simple_repeat 1 52 0 226 279 0 25 chr2 97514395 97514474 -153173380 + (TG)n Simple_repeat Simple_repeat 1 77 0 210 316 102 4 chr2 97514903 97515128 -153172726 + L2 LINE L2 2435 2681 -633 500 300 151 23 chr2 97515229 97515579 -153172275 + L2 LINE L2 2919 3313 0 2081 161 7 0 chr2 97515690 97516000 -153171854 - AluSx SINE Alu 0 312 1 406 352 28 0 chr2 97516490 97516669 -153171185 + MIR SINE MIR 78 261 -1 349 307 60 25 chr2 97516745 97516946 -153170908 + MIR SINE MIR 13 222 -40 2440 79 3 3 chr2 97517773 97518076 -153169778 - AluSq SINE Alu -10 303 1 422 256 100 17 chr2 97518079 97518259 -153169595 + MER113 DNA MER1_type? 33 227 -294 361 267 79 0 chr2 97518263 97518364 -153169490 + L2 LINE L2 3198 3306 -7 418 231 66 8 chr2 97518405 97518526 -153169328 + MER113 DNA MER1_type? 295 422 -99 207 0 0 0 chr2 97518773 97518796 -153169058 + (CA)n Simple_repeat Simple_repeat 1 23 0 814 173 0 0 chr2 97520048 97520175 -153167679 + FLAM_A SINE Alu 8 134 -8 242 192 154 13 chr2 97522426 97522504 -153165350 - LTR16B LTR ERVL -371 93 5 254 261 24 97 chr2 97522751 97522916 -153164938 - MIR SINE MIR 0 262 110 2373 89 10 0 chr2 97522950 97523253 -153164601 + AluSp SINE Alu 1 306 -7 2397 246 70 9 chr2 97523267 97524029 -153163825 + ERVL LTR ERVL 2279 3123 -2641 1928 192 11 3 chr2 97524041 97524395 -153163459 + MER47B DNA MER2_type 3 359 -59 1785 167 0 23 chr2 97524395 97524700 -153163154 - AluJo SINE Alu -13 299 2 2036 152 12 0 chr2 97524702 97525032 -153162822 - MER54A LTR ERVL -7 894 561 1761 168 10 10 chr2 97525035 97525327 -153162527 + AluJo SINE Alu 4 295 -17 2206 135 0 0 chr2 97525330 97525641 -153162213 + AluSx SINE Alu 2 312 0 3283 163 14 9 chr2 97525693 97526258 -153161596 - MER54A LTR ERVL -333 568 1 1441 217 101 110 chr2 97526258 97526658 -153161196 + ERVL LTR ERVL 3303 3698 -2066 1542 180 60 7 chr2 97526658 97526779 -153161075 + AluJb SINE Alu 1 114 -198 279 0 0 0 chr2 97526779 97526810 -153161044 + (TAA)n Simple_repeat Simple_repeat 2 32 0 1542 180 60 7 chr2 97526810 97526972 -153160882 + AluJb SINE Alu 114 299 -13 1441 217 101 110 chr2 97526972 97527134 -153160720 + ERVL LTR ERVL 3698 3860 -1904 621 228 0 0 chr2 97527168 97527295 -153160559 + L1ME1 LINE L1 4039 4165 -1981 2277 123 21 101 chr2 97527301 97527697 -153160157 + MSTC LTR MaLR 1 356 -72 521 163 0 0 chr2 97527697 97527783 -153160071 - L1PB4 LINE L1 -12 6144 6059 2277 123 21 101 chr2 97527783 97527851 -153160003 + MSTC LTR MaLR 356 428 0 3565 193 88 74 chr2 97527851 97527972 -153159882 + L1ME1 LINE L1 4172 4290 -1876 2200 126 0 0 chr2 97527972 97528311 -153159543 + AluSx SINE Alu 1 312 0 3565 193 88 74 chr2 97528311 97528352 -153159502 + L1ME1 LINE L1 4290 4329 -1837 2005 104 36 7 chr2 97528352 97528657 -153159197 + AluSp SINE Alu 1 313 0 3565 193 88 74 chr2 97528657 97529760 -153158094 + L1ME1 LINE L1 4329 5415 -751 2345 119 0 10 chr2 97529760 97530071 -153157783 + AluSx SINE Alu 1 308 -4 3565 193 88 74 chr2 97530071 97530105 -153157749 + L1ME1 LINE L1 5415 5447 -719 2416 80 0 13 chr2 97530105 97530406 -153157448 + AluSq SINE Alu 1 297 -16 3565 193 88 74 chr2 97530406 97530528 -153157326 + L1ME1 LINE L1 5447 5566 -600 440 52 0 0 chr2 97530528 97530586 -153157268 + Alu SINE Alu 236 293 -17 3565 193 88 74 chr2 97530586 97530996 -153156858 + L1ME1 LINE L1 5566 6082 -84 362 256 51 17 chr2 97530982 97531099 -153156755 + L1MEc LINE L1 195 315 -6081 * 854 277 101 11 chr2 97531128 97531395 -153156459 - MLT2E LTR ERVL -335 293 3 552 181 129 70 chr2 97531448 97531594 -153156260 + Charlie2 DNA MER1_type 2109 2245 -617 2260 120 0 0 chr2 97531594 97531893 -153155961 - AluY SINE Alu -10 301 3 552 181 129 70 chr2 97531893 97531932 -153155922 + Charlie2 DNA MER1_type 2245 2280 -582 2417 88 0 7 chr2 97531932 97532238 -153155616 - AluSg SINE Alu -6 304 1 552 181 129 70 chr2 97532238 97532396 -153155458 + Charlie2 DNA MER1_type 2280 2427 -435 1623 128 31 0 chr2 97532396 97532622 -153155232 + AluSx SINE Alu 5 237 -75 2330 100 7 3 chr2 97532627 97532928 -153154926 + AluSp SINE Alu 1 302 -11 552 181 129 70 chr2 97532928 97532979 -153154875 + Charlie2 DNA MER1_type 2430 2535 -327 976 119 0 22 chr2 97533029 97533163 -153154691 + FLAM_C SINE Alu 1 131 -12 3558 91 43 8 chr2 97533164 97533671 -153154183 + LTR17 LTR ERV1 256 780 0 5556 65 1 17 chr2 97533671 97534391 -153153463 + HERV17 LTR ERV1 1 709 -7917 6230 55 16 37 chr2 97534576 97535467 -153152387 + HERV17 LTR ERV1 763 1634 -6992 * 9249 45 8 2 chr2 97535463 97536607 -153151247 + HERV17 LTR ERV1 2577 3727 -4899 12852 54 10 7 chr2 97536607 97537179 -153150675 + HERV17 LTR ERV1 4259 4828 -3798 2514 83 0 6 chr2 97537179 97537492 -153150362 + AluY SINE Alu 1 311 0 12852 54 10 7 chr2 97537492 97538558 -153149296 + HERV17 LTR ERV1 4828 5902 -2724 1236 54 0 30 chr2 97538549 97538717 -153149137 + HERV17 LTR ERV1 6985 7147 -1479 * 281 77 0 0 chr2 97538713 97538752 -153149102 + HERV17 LTR ERV1 7510 7548 -1078 * 2127 50 56 0 chr2 97538729 97539018 -153148836 + HERV17 LTR ERV1 6831 8626 0 2209 102 3 6 chr2 97539018 97539343 -153148511 + LTR17 LTR ERV1 1 324 -456 760 197 81 9 chr2 97539355 97539578 -153148276 + Charlie2 DNA MER1_type 2614 2852 -10 2152 129 3 3 chr2 97539591 97539893 -153147961 + AluJb SINE Alu 5 306 -6 1167 115 120 0 chr2 97540038 97540230 -153147624 + MER2 DNA MER2_type 2 216 -129 1564 77 64 17 chr2 97540244 97540478 -153147376 + MER1B DNA MER1_type 135 339 0 665 188 86 0 chr2 97540478 97540606 -153147248 + MER2 DNA MER2_type 207 345 0 2281 115 0 6 chr2 97540634 97540946 -153146908 + AluSg SINE Alu 1 310 0 337 219 158 18 chr2 97591471 97591585 -153096269 + L1ME4a LINE L1 5992 6121 0 1994 110 7 3 chr2 97591693 97591992 -153095862 - AluSg SINE Alu -10 300 1 295 345 48 0 chr2 97592018 97592163 -153095691 - L3 LINE CR1 -117 1460 1309 335 271 62 68 chr2 97592581 97592758 -153095096 + L2 LINE L2 3096 3271 -1 292 195 149 0 chr2 97593342 97593429 -153094425 + L1ME3A LINE L1 6062 6161 -9 381 256 73 6 chr2 97593788 97593952 -153093902 + G-rich Low_complexity Low_complexity 5 179 0 492 219 211 0 chr2 97594488 97594663 -153093191 - L1MC3 LINE L1 -927 6858 6699 234 305 9 9 chr2 97594715 97594820 -153093034 - L1ME LINE L1 -691 5430 5326 268 157 20 0 chr2 97594838 97594889 -153092965 + MIR SINE MIR 186 237 -25 323 225 157 71 chr2 97596413 97596680 -153091174 - L1ME LINE L1 -1950 4196 3907 258 298 153 8 chr2 97598255 97598379 -153089475 - HAL1 LINE L1 -770 1737 1596 1197 140 11 0 chr2 97598548 97598734 -153089120 + AluSq SINE Alu 106 293 -20 334 306 18 0 chr2 97600035 97600146 -153087708 + MIR SINE MIR 74 186 -76 283 277 21 28 chr2 97600636 97600777 -153087077 + CT-rich Low_complexity Low_complexity 3 142 0 458 306 134 5 chr2 97601103 97601319 -153086535 - MIR SINE MIR -11 251 8 426 226 0 0 chr2 97601343 97601449 -153086405 + CT-rich Low_complexity Low_complexity 3 108 0 583 212 18 12 chr2 97601552 97601722 -153086132 - L1M4 LINE L1 -781 5365 5195 371 316 226 13 chr2 97601787 97601810 -153086044 + L2 LINE L2 2183 2200 -1114 2190 75 41 0 chr2 97601810 97602104 -153085750 - AluY SINE Alu -5 306 1 371 316 226 13 chr2 97602104 97602606 -153085248 + L2 LINE L2 2200 2820 -494 230 300 82 27 chr2 97602801 97602911 -153084943 + MIR SINE MIR 31 146 -62 362 216 23 0 chr2 97603042 97603130 -153084724 + MER96 DNA MER1_type? 1 90 -85 21 0 0 0 chr2 97603196 97603217 -153084637 + GC_rich Low_complexity Low_complexity 1 21 0 5138 122 5 32 chr2 97603330 97603552 -153084302 - L1P LINE L1 -4742 1404 1177 267 54 0 0 chr2 97603552 97603589 -153084265 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 1995 98 0 0 chr2 97603598 97603863 -153083991 - AluY SINE Alu -44 267 3 5138 122 5 32 chr2 97603863 97604467 -153083387 - L1P LINE L1 -4977 1169 591 4860 125 67 10 chr2 97604454 97605395 -153082459 - L1PA15 LINE L1 -37 6128 5143 * 982 103 16 16 chr2 97605362 97605546 -153082308 - L1MCa LINE L1 -3954 2472 2289 * 1289 230 98 0 chr2 97605577 97605873 -153081981 + MLT1A1 LTR MaLR 1 325 -40 21 0 0 0 chr2 97606007 97606028 -153081826 + GC_rich Low_complexity Low_complexity 1 21 0 1631 69 107 23 chr2 97608949 97609175 -153078679 + MER1A DNA MER1_type 246 498 -2204 2217 112 0 0 chr2 97609175 97609479 -153078375 + AluSq SINE Alu 1 304 -9 1631 69 107 23 chr2 97609479 97609514 -153078340 + MER1A DNA MER1_type 498 529 0 372 252 151 14 chr2 97609591 97609730 -153078124 + MIR SINE MIR 100 257 -5 207 226 0 48 chr2 97610138 97610200 -153077654 + (CACCC)n Simple_repeat Simple_repeat 3 61 0 1520 191 58 0 chr2 97610292 97610585 -153077269 - L1MB2 LINE L1 -3 6168 5859 1499 106 197 8 chr2 97610650 97610904 -153076950 - AluSg1 SINE Alu -7 302 1 2044 102 3 32 chr2 97610907 97611220 -153076634 - AluSg SINE Alu -2 308 5 813 126 16 0 chr2 97611294 97611421 -153076433 - L1MA9 LINE L1 0 6312 6184 1638 167 16 16 chr2 97611717 97612028 -153075826 - AluJo SINE Alu -1 311 1 2371 83 0 10 chr2 97614799 97615111 -153072743 - AluSx SINE Alu -3 309 1 2747 161 54 2 chr2 97615111 97615608 -153072246 + L1MB3 LINE L1 5661 6183 0 2451 216 73 8 chr2 97615653 97616298 -153071556 + L1ME3 LINE L1 5432 6118 -44 334 277 84 26 chr2 97616492 97616647 -153071207 - MIR3 SINE MIR -25 183 20 746 276 49 9 chr2 97617873 97618098 -153069756 + MIR SINE MIR 4 237 -25 374 189 24 24 chr2 97618105 97618232 -153069622 + GA-rich Low_complexity Low_complexity 2 128 0 707 184 15 23 chr2 97618518 97618784 -153069070 + GA-rich Low_complexity Low_complexity 1 264 0 190 402 28 0 chr2 97619048 97619155 -153068699 - MIR3 SINE MIR -54 154 45 2239 90 0 7 chr2 97619999 97620298 -153067556 + AluSq SINE Alu 1 297 -16 1243 99 0 6 chr2 97620301 97620472 -153067382 + AluSg/x SINE Alu 127 296 -16 234 0 0 0 chr2 97620517 97620543 -153067311 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 432 0 0 0 chr2 97620542 97620590 -153067264 + (CA)n Simple_repeat Simple_repeat 1 48 0 1836 153 7 13 chr2 97621398 97621706 -153066148 + AluSx SINE Alu 1 306 -6 612 278 113 10 chr2 97621706 97621997 -153065857 + L1ME LINE L1 5323 5643 -521 2775 182 121 11 chr2 97622028 97622403 -153065451 - L1MB8 LINE L1 -166 6012 5680 2268 97 0 0 chr2 97622403 97622693 -153065161 - AluSg SINE Alu -15 295 6 2775 182 121 11 chr2 97622693 97623313 -153064541 - L1MB8 LINE L1 -498 5680 4910 1267 134 5 0 chr2 97623427 97623613 -153064241 - AluSx SINE Alu -125 187 1 522 177 32 32 chr2 97623613 97623771 -153064083 - L1M4 LINE L1 -1032 5114 4957 476 293 37 85 chr2 97623899 97623998 -153063856 - L1MC/D LINE L1 -639 5603 5501 2004 153 3 0 chr2 97623998 97624305 -153063549 - AluSx SINE Alu -4 308 1 476 293 37 85 chr2 97624305 97624483 -153063371 - L1MC/D LINE L1 -741 5501 5350 2010 113 0 56 chr2 97624483 97624803 -153063051 - AluSx SINE Alu -10 302 1 476 293 37 85 chr2 97624803 97624895 -153062959 - L1MC/D LINE L1 -892 5350 5255 185 364 0 0 chr2 97625972 97626038 -153061816 - MIR SINE MIR -116 146 81 312 327 132 4 chr2 97626664 97626936 -153060918 - L2 LINE L2 -41 3231 2925 1788 114 63 4 chr2 97627335 97627606 -153060248 + AluJb SINE Alu 1 287 -25 1098 129 2 2 chr2 97627727 97627971 -153059883 + (TCCA)n Simple_repeat Simple_repeat 1 423 0 367 276 49 32 chr2 97628012 97628135 -153059719 + L2 LINE L2 3187 3311 -2 266 400 19 7 chr2 97628205 97628360 -153059494 - MIR3 SINE MIR -44 164 8 364 232 30 20 chr2 97628731 97628830 -153059024 + MIR SINE MIR 25 124 -84 184 370 30 0 chr2 97628844 97628944 -153058910 + MER5A DNA MER1_type 38 140 -49 316 336 8 25 chr2 97629422 97629544 -153058310 + MIR SINE MIR 106 225 -37 307 116 74 0 chr2 97629891 97629951 -153057903 - MSTB LTR MaLR -301 63 1 359 303 65 90 chr2 97630080 97630447 -153057407 + L2 LINE L2 2914 3271 -1 182 366 85 0 chr2 97630442 97630524 -153057330 + L2 LINE L2 373 461 -2853 * 719 201 6 0 chr2 97631459 97631623 -153056231 + (TGGA)n Simple_repeat Simple_repeat 4 168 0 195 366 134 8 chr2 97633214 97633348 -153054506 + MIR3 SINE MIR 37 187 -21 * 265 204 31 82 chr2 97633337 97633435 -153054419 + MIR SINE MIR 47 139 -123 245 327 10 48 chr2 97633517 97633621 -153054233 - MIR SINE MIR -50 212 113 281 358 33 8 chr2 97634716 97634836 -153053018 + L2 LINE L2 3191 3313 0 26 0 0 0 chr2 97636905 97636931 -153050923 + AT_rich Low_complexity Low_complexity 1 26 0 1887 159 3 3 chr2 97636940 97637236 -153050618 - AluJo SINE Alu -16 296 1 2448 64 0 13 chr2 97637237 97637550 -153050304 - AluY SINE Alu -2 309 1 330 318 149 0 chr2 97637559 97637666 -153050188 - MIR SINE MIR -120 142 20 343 318 19 0 chr2 97637991 97638098 -153049756 - L2 LINE L2 0 3272 3164 420 304 7 14 chr2 97638642 97638780 -153049074 - MIR3 SINE MIR -39 169 33 994 107 0 0 chr2 97639143 97639274 -153048580 - AluY SINE Alu -180 131 1 227 315 19 9 chr2 97640374 97640482 -153047372 + GA-rich Low_complexity Low_complexity 2 110 0 185 62 83 0 chr2 97641119 97641167 -153046687 + (TG)n Simple_repeat Simple_repeat 1 52 0 226 279 0 25 chr2 97641662 97641741 -153046113 + (TG)n Simple_repeat Simple_repeat 1 77 0 579 316 154 21 chr2 97642171 97642847 -153045007 + L2 LINE L2 2435 3313 0 1993 161 7 0 chr2 97642958 97643268 -153044586 - AluSx SINE Alu 0 312 1 232 361 39 0 chr2 97644597 97644752 -153043102 + L2 LINE L2 2934 3094 -178 273 197 91 0 chr2 97644854 97644920 -153042934 - MIR3 SINE MIR -36 172 101 366 263 0 0 chr2 97646636 97646712 -153041142 - L2 LINE L2 0 3313 3238 533 204 61 0 chr2 97647157 97647289 -153040565 + MER90 LTR ERV1 473 612 -2 182 272 261 0 chr2 97647305 97647397 -153040457 + L2 LINE L2 2640 2755 -559 5691 105 52 15 chr2 97647510 97647798 -153040056 + L1PA15 LINE L1 5023 5299 -866 2052 118 6 19 chr2 97647798 97648113 -153039741 + AluSx SINE Alu 1 311 -1 5691 105 52 15 chr2 97648113 97648920 -153038934 + L1PA15 LINE L1 5299 6165 0 2324 97 0 6 chr2 97649022 97649333 -153038521 + AluSq SINE Alu 1 309 -4 618 275 57 31 chr2 97649371 97649600 -153038254 - L2 LINE L2 0 3313 3079 290 278 103 51 chr2 97649618 97649938 -153037916 + L1MC4a LINE L1 5283 5642 -479 301 289 72 41 chr2 97650017 97650114 -153037740 + L1MC4a LINE L1 5798 5897 -1911 1990 123 17 3 chr2 97650229 97650521 -153037333 + AluSx SINE Alu 1 296 -16 484 310 206 3 chr2 97650544 97650854 -153037000 + L1MC4a LINE L1 7108 7480 -328 555 224 144 30 chr2 97650882 97651054 -153036800 + MER58A DNA MER1_type 1 201 -2219 2406 120 19 25 chr2 97651054 97651420 -153036434 + THE1B LTR MaLR 1 364 0 555 224 144 30 chr2 97651420 97651448 -153036406 + MER58A DNA MER1_type 201 224 0 374 302 195 5 chr2 97651448 97651653 -153036201 + L1MC4 LINE L1 7604 7847 -195 252 266 53 11 chr2 97651757 97651851 -153036003 + L1MC4a LINE L1 7711 7808 0 395 300 123 40 chr2 97651863 97652025 -153035829 + L1ME4a LINE L1 5485 5632 -489 2301 107 0 0 chr2 97652025 97652334 -153035520 + AluSc SINE Alu 1 309 0 395 300 123 40 chr2 97652334 97652568 -153035286 + L1ME4a LINE L1 5632 5914 -207 239 244 180 69 chr2 97653418 97653635 -153034219 - L1MC4a LINE L1 -1845 5963 5723 334 284 11 11 chr2 97653663 97653751 -153034103 - L1MC4a LINE L1 -2308 5500 5413 227 306 107 25 chr2 97653992 97654113 -153033741 + MIR3 SINE MIR 51 181 -27 212 310 53 53 chr2 97654728 97654841 -153033013 - L2 LINE L2 -5 3267 3155 327 224 176 0 chr2 97655285 97655370 -153032484 + L2 LINE L2 3173 3272 0 1748 128 28 10 chr2 97655485 97655773 -153032081 + AluSq SINE Alu 1 293 -20 815 183 0 0 chr2 97657774 97657905 -153029949 - FLAM_A SINE Alu -4 138 8 207 0 0 0 chr2 97659157 97659180 -153028674 + (TG)n Simple_repeat Simple_repeat 1 23 0 399 231 66 8 chr2 97659427 97659548 -153028306 - MER113 DNA MER1_type? -99 422 295 368 267 79 0 chr2 97659589 97659690 -153028164 - L2 LINE L2 -7 3306 3198 397 250 100 17 chr2 97659694 97659874 -153027980 - MER113 DNA MER1_type? -294 227 33 2313 82 3 3 chr2 97659877 97660180 -153027674 + AluSq SINE Alu 1 303 -10 397 316 59 24 chr2 97661007 97661208 -153026646 - MIR SINE MIR -40 222 13 446 353 29 0 chr2 97661284 97661454 -153026400 - MIR SINE MIR -1 261 87 224 329 0 0 chr2 97661919 97661998 -153025856 + G-rich Low_complexity Low_complexity 2 80 0 238 300 0 0 chr2 97662642 97662702 -153025152 + MIR SINE MIR 113 172 -90 243 316 35 9 chr2 97663012 97663126 -153024728 - MIR SINE MIR -72 136 20 306 271 44 50 chr2 97664187 97664330 -153023524 + MIR3 SINE MIR 3 156 -52 270 359 94 24 chr2 97664337 97664507 -153023347 - MER117 DNA MER1_type 0 197 16 235 325 104 13 chr2 97664795 97664949 -153022905 + MIR SINE MIR 81 248 -14 340 311 56 0 chr2 97665462 97665642 -153022212 + L2 LINE L2 2933 3122 -150 2700 202 20 65 chr2 97668841 97669484 -153018370 - MER90 LTR ERV1 0 614 1 330 301 20 20 chr2 97669587 97669899 -153017955 + L1M LINE L1 5127 5427 -745 786 291 10 10 chr2 97669901 97670210 -153017644 - L1M4 LINE L1 -3666 2480 2172 251 200 0 0 chr2 97670208 97670263 -153017591 - L1PA16 LINE L1 0 6166 6112 * 9664 46 8 0 chr2 97670275 97672213 -153015641 - L1PA5 LINE L1 -7 6147 4203 4718 68 3 13 chr2 97672292 97672967 -153014887 - L1PA5 LINE L1 -3993 2153 1486 361 81 16 16 chr2 97673072 97673134 -153014720 - L1MCa LINE L1 -4888 1538 1477 186 71 0 0 chr2 97673140 97673168 -153014686 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1415 144 8 33 chr2 97673170 97673413 -153014441 - AluSx SINE Alu -33 279 43 613 133 126 0 chr2 97673442 97673585 -153014269 - L1MCa LINE L1 -4955 1471 1311 180 0 0 0 chr2 97673586 97673606 -153014248 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1804 127 42 14 chr2 97673606 97673890 -153013964 - 7SLRNA srpRNA srpRNA -21 299 8 1080 186 15 5 chr2 97673895 97674099 -153013755 - AluJb SINE Alu -20 292 87 3538 159 28 17 chr2 97674099 97674804 -153013050 - L1MCa LINE L1 -5110 1316 604 308 262 32 58 chr2 97674855 97675095 -153012759 + L1MC4 LINE L1 7830 7995 0 977 281 102 10 chr2 97675415 97675710 -153012144 - MLT1I LTR MaLR -2 407 86 185 333 132 40 chr2 97675831 97676005 -153011849 + L3 LINE CR1 1213 1402 -175 263 324 20 10 chr2 97676137 97676239 -153011615 + L3 LINE CR1 1428 1530 -47 1487 144 4 0 chr2 97676345 97676588 -153011266 + Tigger7 DNA MER2_type 425 668 -1819 594 224 0 0 chr2 97676602 97676718 -153011136 + Tigger7 DNA MER2_type 2358 2473 -14 902 236 39 7 chr2 97676718 97676998 -153010856 - L1ME2 LINE L1 -234 5930 5642 2212 218 71 12 chr2 97676998 97677562 -153010292 - MER92B LTR ERV1 0 636 40 274 284 9 9 chr2 97677663 97677779 -153010075 - L1ME2 LINE L1 -789 5357 5242 1746 130 4 0 chr2 97677780 97678041 -153009813 - AluJb SINE Alu -15 297 36 4343 178 34 19 chr2 97678051 97678573 -153009281 - L1MB5 LINE L1 -1 6173 5660 2159 109 3 3 chr2 97678573 97678876 -153008978 - AluSq SINE Alu -10 303 1 4343 178 34 19 chr2 97678876 97679721 -153008133 - L1MB5 LINE L1 -514 5660 4787 327 220 101 9 chr2 97679721 97679830 -153008024 + L2 LINE L2 2943 3061 -252 245 323 39 24 chr2 97680333 97680460 -153007394 - L2 LINE L2 -837 2477 2349 427 265 59 18 chr2 97680591 97680761 -153007093 - MIR SINE MIR -78 184 8 227 356 81 12 chr2 97681380 97681540 -153006314 + MIR SINE MIR 49 219 -43 785 239 236 12 chr2 97682767 97683101 -153004753 + MLT1J2 LTR MaLR 36 444 -6 325 362 4 29 chr2 97684893 97685077 -153002777 - L1MC/D LINE L1 -564 5795 5611 251 291 82 0 chr2 97685099 97685209 -153002645 - MIR SINE MIR -72 136 18 4501 186 25 37 chr2 97685263 97685970 -153001884 - L1MB7 LINE L1 0 6184 5470 861 165 0 0 chr2 97685970 97686103 -153001751 - FLAM_A SINE Alu 0 133 1 4501 186 25 37 chr2 97686103 97687246 -153000608 - L1MB7 LINE L1 -714 5470 4358 211 135 27 0 chr2 97687466 97687503 -153000351 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 246 325 12 0 chr2 97690491 97690571 -152997283 + MIR SINE MIR 35 115 -93 2869 148 37 42 chr2 97691426 97691954 -152995900 + L1MCa LINE L1 1745 2269 -4157 1814 224 34 0 chr2 97691954 97692307 -152995547 - MLT1A1 LTR MaLR 0 365 1 2869 148 37 42 chr2 97692307 97692507 -152995347 + L1MCa LINE L1 2269 2469 -3957 * 5049 115 41 53 chr2 97692485 97692674 -152995180 + L1PA15 LINE L1 5427 5617 -828 319 43 0 43 chr2 97692674 97692721 -152995133 - U2 snRNA snRNA -143 45 1 5049 115 41 53 chr2 97692721 97693518 -152994336 + L1PA15 LINE L1 5617 6443 -2 * 7251 236 35 27 chr2 97693516 97694817 -152993037 + L1MCa LINE L1 2452 3741 -2685 1757 155 20 0 chr2 97694817 97695113 -152992741 + AluJb SINE Alu 11 312 0 7251 236 35 27 chr2 97695113 97695927 -152991927 + L1MCa LINE L1 3741 4547 -1879 2024 141 0 3 chr2 97695927 97696231 -152991623 + AluSx SINE Alu 1 303 -9 7251 236 35 27 chr2 97696231 97696841 -152991013 + L1MCa LINE L1 4547 5367 -1059 1861 162 3 0 chr2 97696842 97697144 -152990710 - AluSx SINE Alu -1 311 9 3169 146 13 9 chr2 97697211 97697738 -152990116 + L1MC1 LINE L1 5805 6333 0 1801 288 63 23 chr2 97697738 97697941 -152989913 + L1MDb LINE L1 1141 1335 -5252 754 199 204 5 chr2 97697941 97698127 -152989727 + MER58A DNA MER1_type 2 224 0 1801 288 63 23 chr2 97698127 97698882 -152988972 + L1MDb LINE L1 1335 2177 -4410 380 252 36 0 chr2 97698886 97698997 -152988857 + L1ME2 LINE L1 6050 6164 0 255 313 113 19 chr2 97699754 97699914 -152987940 + MIR3 SINE MIR 20 194 -14 252 342 103 16 chr2 97700724 97700908 -152986946 + MIR SINE MIR 45 244 -18 225 182 91 0 chr2 97701750 97701805 -152986049 - MER117 DNA MER1_type -85 112 53 192 77 0 0 chr2 97703063 97703089 -152984765 + (TCC)n Simple_repeat Simple_repeat 2 27 0 248 233 23 23 chr2 97704396 97704482 -152983372 + G-rich Low_complexity Low_complexity 2 87 0 195 353 9 26 chr2 97707130 97707246 -152980608 + L2 LINE L2 2918 3031 -241 455 295 261 12 chr2 97707915 97708325 -152979529 + L2 LINE L2 1103 1614 -1700 698 259 117 5 chr2 97708676 97708873 -152978981 + MER20 DNA MER1_type 1 219 0 227 248 69 20 chr2 97708965 97709066 -152978788 + L2 LINE L2 2244 2349 -965 224 326 129 21 chr2 97709197 97709390 -152978464 + L2 LINE L2 2564 2777 -537 415 306 41 0 chr2 97709443 97709590 -152978264 + L2 LINE L2 2905 3057 -256 658 147 0 28 chr2 97713334 97713443 -152974411 - FLAM_A SINE Alu -20 122 17 2217 68 31 0 chr2 97713640 97713932 -152973922 + AluY SINE Alu 1 301 -10 583 246 147 50 chr2 97714333 97714674 -152973180 + LTR16A1 LTR ERVL 11 384 -73 30082 68 3 2 chr2 97719626 97724566 -152963288 + L1PA6 LINE L1 1210 6154 0 784 321 46 19 chr2 97725783 97726150 -152961704 + MLT1K LTR MaLR 172 548 -40 342 327 90 14 chr2 97726267 97726478 -152961376 - L3 LINE CR1 -788 789 563 604 189 8 24 chr2 97726893 97727020 -152960834 + MLT2B3 LTR ERVL 101 225 -329 1912 210 16 82 chr2 97727206 97727777 -152960077 - MLT2B3 LTR ERVL -21 533 1 203 366 18 55 chr2 97728952 97729116 -152958738 - L2 LINE L2 0 3313 3156 348 300 11 11 chr2 97730447 97730537 -152957317 - L1MC4 LINE L1 -1339 6703 6614 * 349 281 0 22 chr2 97730457 97730546 -152957308 + L1MC4 LINE L1 6617 6703 -1339 362 327 50 20 chr2 97736031 97736193 -152951661 - MIR SINE MIR -62 146 2 1313 185 53 32 chr2 97736441 97736722 -152951132 - AluJb SINE Alu -20 292 6 217 253 108 24 chr2 97736921 97737004 -152950850 - L2 LINE L2 -2090 1224 1135 856 298 218 20 chr2 97737269 97737941 -152949913 + L2 LINE L2 2187 2987 -285 420 207 25 50 chr2 97742544 97742665 -152945189 - MIR SINE MIR -97 165 48 1029 301 36 15 chr2 97743149 97743538 -152944316 + MLT1I LTR MaLR 1 397 -12 755 279 61 56 chr2 97743666 97744060 -152943794 - LTR7 LTR ERV1 -31 419 24 272 239 159 0 chr2 97744255 97744343 -152943511 - MIR3 SINE MIR -22 186 85 192 303 26 13 chr2 97744814 97744890 -152942964 - L3 LINE CR1 -173 1404 1328 528 275 71 42 chr2 97745762 97746002 -152941852 + MLT1I LTR MaLR 163 409 0 214 216 54 27 chr2 97746011 97746085 -152941769 + MIR SINE MIR 127 202 -60 1286 209 55 13 chr2 97747334 97747563 -152940291 + MER33 DNA MER1_type 1 248 -2337 2029 132 7 0 chr2 97747563 97747873 -152939981 - AluSx SINE Alu 0 312 1 1286 209 55 13 chr2 97747873 97747954 -152939900 + MER33 DNA MER1_type 248 324 0 1645 229 104 34 chr2 97748009 97748481 -152939373 - MLT1D LTR MaLR 0 505 1 432 298 93 51 chr2 97748655 97749059 -152938795 + MLT1K LTR MaLR 129 573 -15 280 294 29 37 chr2 97750109 97750245 -152937609 + MLT1J LTR MaLR 231 365 -146 236 210 161 12 chr2 97750669 97750750 -152937104 - MLT1L LTR MaLR 0 615 523 290 157 0 0 chr2 97750829 97750880 -152936974 - MLT1L LTR MaLR -221 394 344 1445 263 58 16 chr2 97750999 97751444 -152936410 + MLT1L LTR MaLR 152 615 0 413 305 75 11 chr2 97752389 97752563 -152935291 + MLT1K LTR MaLR 190 374 -214 365 330 59 53 chr2 97753033 97753108 -152934746 - L1ME3A LINE L1 -224 5946 5872 362 306 96 51 chr2 97753108 97753461 -152934393 - L1MB4 LINE L1 -315 5865 5497 859 173 25 0 chr2 97753468 97753630 -152934224 - FRAM SINE Alu -10 166 1 1419 222 254 17 chr2 97753672 97754199 -152933655 - MLT1E1 LTR MaLR 0 654 3 3958 216 48 6 chr2 97754226 97755256 -152932598 - L1MB3 LINE L1 -7 6176 5211 6369 151 33 30 chr2 97755501 97756661 -152931193 + L1P LINE L1 11 1173 -4973 1622 195 49 11 chr2 97756775 97757123 -152930731 + MER50 LTR ERV1 374 734 0 2477 174 23 37 chr2 97757123 97757315 -152930539 + L1MB7 LINE L1 5613 5806 -378 1932 138 3 0 chr2 97757315 97757605 -152930249 + AluSx SINE Alu 7 297 -15 2477 174 23 37 chr2 97757605 97757929 -152929925 + L1MB7 LINE L1 5806 6122 -62 2586 226 83 25 chr2 97757973 97758241 -152929613 + L1ME2 LINE L1 5299 5550 -614 2207 100 0 13 chr2 97758241 97758552 -152929302 + AluSx SINE Alu 1 307 -5 2586 226 83 25 chr2 97758552 97759056 -152928798 + L1ME2 LINE L1 5550 6116 -48 228 329 0 0 chr2 97759073 97759152 -152928702 + L1MA10 LINE L1 6256 6334 0 263 247 108 32 chr2 97759196 97759354 -152928500 + HAL1 LINE L1 46 215 -2292 805 219 32 0 chr2 97959497 97959652 -152728202 - FRAM SINE Alu -17 159 1 393 22 0 0 chr2 97960184 97960230 -152727624 + (CA)n Simple_repeat Simple_repeat 1 46 0 1540 159 4 0 chr2 97960246 97960479 -152727375 - AluSx SINE Alu -23 289 56 1261 125 8 91 chr2 97962200 97962464 -152725390 + L1MA7 LINE L1 6050 6291 0 2678 197 36 16 chr2 97963011 97963864 -152723990 - L1 LINE L1 -3357 4208 3338 234 22 22 44 chr2 97963865 97963910 -152723944 + (TTATA)n Simple_repeat Simple_repeat 5 48 0 1110 117 0 0 chr2 97963911 97964065 -152723789 - AluY SINE Alu -26 285 132 677 295 60 44 chr2 97964370 97964685 -152723169 - L2 LINE L2 -1260 2054 1735 351 0 0 0 chr2 97964977 97965016 -152722838 + (TA)n Simple_repeat Simple_repeat 1 39 0 1490 188 7 4 chr2 97966189 97966465 -152721389 - AluSx SINE Alu -32 280 4 1318 185 15 8 chr2 97966525 97966792 -152721062 + MLT1D LTR MaLR 247 498 -7 331 235 7 103 chr2 97966807 97966943 -152720911 + L2 LINE L2 2850 2972 -342 328 226 0 0 chr2 97967002 97967064 -152720790 + L1MEc LINE L1 29 90 -6306 1148 125 6 0 chr2 97967072 97967240 -152720614 - AluSp SINE Alu -8 305 137 337 261 106 28 chr2 97967546 97967688 -152720166 + L2 LINE L2 3119 3271 -42 2065 134 0 3 chr2 97968304 97968610 -152719244 - AluSq SINE Alu -6 307 3 931 194 22 71 chr2 97968997 97969360 -152718494 + L1MD3 LINE L1 6034 7994 -1 1180 220 29 109 chr2 97969499 97969976 -152717878 - L1ME LINE L1 -340 5822 5384 843 221 0 7 chr2 97970076 97970221 -152717633 + AluSc SINE Alu 143 286 -23 393 22 0 0 chr2 97970238 97970284 -152717570 + (TG)n Simple_repeat Simple_repeat 1 46 0 181 326 69 56 chr2 97970289 97970433 -152717421 + L2 LINE L2 2464 2609 -705 818 200 32 0 chr2 97970816 97970971 -152716883 + FRAM SINE Alu 1 159 -17 1808 153 10 3 chr2 97971677 97971965 -152715889 + AluSx SINE Alu 5 294 -18 10100 106 2 6 chr2 97972192 97973597 -152714257 - HERVK9 LTR ERVK -3393 2523 1124 1082 163 0 0 chr2 97974310 97974463 -152713391 + FRAM SINE Alu 2 154 -12 608 118 0 0 chr2 97975353 97975446 -152712408 + L1P LINE L1 4232 4324 -1822 1242 135 5 0 chr2 97975448 97975640 -152712214 - L1P LINE L1 -2347 3799 3607 475 308 16 16 chr2 97975908 97976093 -152711761 - HERVL LTR ERVL -779 4875 4691 296 167 0 0 chr2 97976114 97976162 -152711692 - MER45 DNA AcHobo -49 1532 1485 2150 125 0 0 chr2 97976162 97976499 -152711355 + AluSx SINE Alu 6 342 0 571 299 56 8 chr2 97977131 97977365 -152710489 + L1M4 LINE L1 2458 2702 -3444 318 287 10 0 chr2 97977368 97977469 -152710385 + L1M4 LINE L1 5191 5292 -854 1419 137 26 4 chr2 97977586 97977820 -152710034 - L1 LINE L1 -1402 4744 4506 1737 136 0 4 chr2 97977822 97978080 -152709774 - AluSp SINE Alu 0 313 57 4539 132 189 33 chr2 97978080 97979069 -152708785 + MER11B LTR ERVK 3 1236 0 462 129 0 0 chr2 97979070 97979132 -152708722 - AluSp SINE Alu -255 63 2 256 197 13 13 chr2 97979133 97979209 -152708645 - L1 LINE L1 -1633 4513 4438 2857 187 37 20 chr2 97979214 97979546 -152708308 - L1 LINE L1 -2315 3831 3506 2161 123 0 7 chr2 97979546 97979846 -152708008 - AluSx SINE Alu -14 298 1 2857 187 37 20 chr2 97979846 97980164 -152707690 - L1 LINE L1 -2640 3506 3170 625 155 0 60 chr2 97980170 97980286 -152707568 - AluSg/x SINE Alu -7 303 195 1107 226 109 69 chr2 97980673 97980954 -152706900 - MSTD LTR MaLR 0 396 95 1627 176 3 20 chr2 97980954 97981256 -152706598 - AluJb SINE Alu -11 301 5 1107 226 109 69 chr2 97981256 97981350 -152706504 - MSTD LTR MaLR -301 95 6 283 291 134 37 chr2 97982203 97982337 -152705517 - MIR3 SINE MIR -61 147 1 196 293 52 0 chr2 97982337 97982388 -152705466 + MIR3 SINE MIR 154 207 -1 332 192 13 13 chr2 97982645 97982723 -152705131 - L1M LINE L1 -763 5403 5326 441 218 61 54 chr2 97983276 97983423 -152704431 - MIR SINE MIR -29 233 86 522 198 10 36 chr2 97984579 97984748 -152703106 + L1M1 LINE L1 3744 4513 -1633 456 145 0 0 chr2 97984749 97984811 -152703043 + AluSp SINE Alu 2 63 -255 4177 158 43 54 chr2 97984812 97985804 -152702050 - MER11C LTR ERVK 0 1071 1 1833 114 0 4 chr2 97985805 97986060 -152701794 + AluSp SINE Alu 60 313 0 3221 147 19 2 chr2 97986061 97986599 -152701255 + L1M1 LINE L1 4505 5051 -1095 1286 182 8 8 chr2 97986601 97986837 -152701017 + AluJo SINE Alu 74 309 -3 183 80 0 0 chr2 97986853 97986878 -152700976 + (GAGAA)n Simple_repeat Simple_repeat 3 27 0 1903 159 0 42 chr2 97986878 97987440 -152700414 + L1M1 LINE L1 5041 5585 -720 1868 115 0 0 chr2 97987540 97987783 -152700071 - AluSq SINE Alu -70 243 1 604 264 13 25 chr2 97987786 97987945 -152699909 - MIR SINE MIR -100 162 6 28 29 0 0 chr2 97987997 97988032 -152699822 + AT_rich Low_complexity Low_complexity 1 35 0 685 91 0 40 chr2 97988032 97988131 -152699723 + L1P3 LINE L1 2 96 -6365 9470 143 17 76 chr2 97988132 97990026 -152697828 + L1P3 LINE L1 786 2567 -3894 823 257 95 5 chr2 97990977 97991199 -152696655 + MIR SINE MIR 11 252 -10 1342 123 0 82 chr2 97993109 97993300 -152694554 + AluY SINE Alu 69 237 -74 1615 81 0 0 chr2 97993300 97993498 -152694356 + AluY SINE Alu 1 198 -113 1342 123 0 82 chr2 97993498 97993549 -152694305 + AluY SINE Alu 237 291 -20 1427 259 154 42 chr2 97993588 97994520 -152693334 - L1MC4a LINE L1 -996 6812 5776 385 276 31 88 chr2 97995836 97995957 -152691897 - MER5A DNA MER1_type 0 189 81 2455 75 0 10 chr2 97995957 97996262 -152691592 - AluY SINE Alu -9 302 1 385 276 31 88 chr2 97996262 97996332 -152691522 - MER5A DNA MER1_type -108 81 9 2072 122 7 7 chr2 97996557 97996853 -152691001 - AluSq SINE Alu -17 296 1 972 188 0 30 chr2 97996863 97997060 -152690794 - L1MB8 LINE L1 0 6178 5988 288 356 119 22 chr2 97997154 97997909 -152689945 - L2 LINE L2 -1544 1770 943 294 213 120 97 chr2 97998504 97998810 -152689044 - L1MC4a LINE L1 -743 5403 5268 279 300 69 95 chr2 97998960 97999307 -152688547 + HERVL LTR ERVL 4786 5123 -531 1253 135 5 0 chr2 97999318 97999510 -152688344 + L1P LINE L1 3607 3799 -2347 3141 148 8 13 chr2 97999512 98000047 -152687807 - L1P LINE L1 -1822 4324 3793 1455 235 15 43 chr2 98000058 98000197 -152687657 + L1M4 LINE L1 2476 2617 -3529 1486 153 18 79 chr2 98000197 98000365 -152687489 + MER33 DNA MER1_type 5 143 -2442 2200 116 0 3 chr2 98000365 98000666 -152687188 + AluSx SINE Alu 1 300 -12 1486 153 18 79 chr2 98000666 98000838 -152687016 + MER33 DNA MER1_type 143 324 0 1455 235 15 43 chr2 98000838 98001060 -152686794 + L1M4 LINE L1 2617 2824 -3322 1692 169 29 26 chr2 98001060 98001368 -152686486 + AluJo SINE Alu 1 309 -3 1455 235 15 43 chr2 98001368 98001473 -152686381 + L1M4 LINE L1 2824 2930 -3216 1989 137 10 22 chr2 98001483 98001797 -152686057 - AluSx SINE Alu -2 310 1 1431 94 11 0 chr2 98002042 98002233 -152685621 - AluSg1 SINE Alu -116 193 1 281 273 187 13 chr2 98002325 98002475 -152685379 - L2 LINE L2 -407 2907 2732 676 281 60 5 chr2 98002536 98002753 -152685101 - L2 LINE L2 -592 2722 2494 632 74 0 12 chr2 98002762 98002843 -152685011 + AluY SINE Alu 219 298 -13 1126 175 132 4 chr2 98002843 98003071 -152684783 + MLT1A1 LTR MaLR 109 365 0 714 259 145 29 chr2 98003074 98003418 -152684436 + L2 LINE L2 2910 3293 -20 1812 138 8 11 chr2 98003942 98004210 -152683644 + AluJb SINE Alu 26 292 -20 236 282 14 28 chr2 98004217 98004288 -152683566 - L2 LINE L2 -1864 1450 1381 21 0 0 0 chr2 98004565 98004586 -152683268 + AT_rich Low_complexity Low_complexity 1 21 0 345 212 85 1 chr2 98004608 98004733 -152683121 + L1ME2 LINE L1 5817 5949 -215 24 0 0 0 chr2 98005078 98005102 -152682752 + AT_rich Low_complexity Low_complexity 1 24 0 2451 74 0 0 chr2 98007164 98007463 -152680391 - AluY SINE Alu -12 299 1 2277 105 3 3 chr2 98007507 98007813 -152680041 - AluSx SINE Alu -6 306 1 2333 101 0 3 chr2 98008901 98009209 -152678645 + AluSq SINE Alu 1 307 -6 414 245 99 26 chr2 98009823 98009974 -152677880 - L2 LINE L2 -41 3272 3111 1455 158 21 0 chr2 98010020 98010261 -152677593 - AluJo SINE Alu -22 290 45 364 91 106 15 chr2 98010312 98010378 -152677476 - MER41A LTR ERV1 -91 463 392 399 266 177 66 chr2 98010641 98010991 -152676863 - L2 LINE L2 -1067 2247 1859 2456 60 0 3 chr2 98011132 98011434 -152676420 + AluY SINE Alu 1 301 -10 357 177 0 0 chr2 98011436 98011498 -152676356 + L1MEc LINE L1 1193 1254 -5142 1907 151 3 26 chr2 98011682 98011994 -152675860 + AluJb SINE Alu 1 305 -7 2420 68 0 56 chr2 98011996 98012319 -152675535 + AluY SINE Alu 3 307 -4 8215 107 60 44 chr2 98015380 98016785 -152671069 + MER4A-int LTR ERV1 5171 6598 0 644 103 21 10 chr2 98016786 98016883 -152670971 + MER4A LTR ERV1 1 98 -566 1965 107 158 75 chr2 98016883 98017256 -152670598 + MER4A LTR ERV1 261 664 0 2972 101 7 0 chr2 98017256 98017674 -152670180 - L1PBa LINE L1 -5056 1807 1387 452 293 44 11 chr2 98017852 98018033 -152669821 + MIR SINE MIR 46 232 -30 1454 269 62 9 chr2 98018218 98018657 -152669197 + MLT1C LTR MaLR 6 467 0 207 318 23 23 chr2 98018707 98018795 -152669059 + L2 LINE L2 3184 3271 -1 399 149 0 0 chr2 98019454 98019528 -152668326 + (TC)n Simple_repeat Simple_repeat 2 75 0 3069 127 67 4 chr2 98019640 98020120 -152667734 - MER9 LTR ERVK 0 511 2 25702 87 19 6 chr2 98020870 98025152 -152662702 - L1PA7 LINE L1 -133 6021 1685 534 165 0 0 chr2 98025252 98025349 -152662505 + L1MA3 LINE L1 4955 5051 -1095 1274 177 9 9 chr2 98025351 98025577 -152662277 + AluJo SINE Alu 74 299 -13 264 122 0 0 chr2 98025596 98025637 -152662217 + (GAGAA)n Simple_repeat Simple_repeat 1 41 0 5908 134 31 49 chr2 98025651 98026723 -152661131 + L1MA3 LINE L1 5061 6116 -189 1643 157 4 11 chr2 98026723 98026984 -152660870 - AluJo SINE Alu -16 296 38 5908 134 31 49 chr2 98026984 98027171 -152660683 + L1MA3 LINE L1 6116 6305 0 2476 176 77 14 chr2 98027564 98028082 -152659772 - MER90 LTR ERV1 -63 551 1 409 360 50 17 chr2 98028248 98028548 -152659306 - MER90-int LTR ERV1 -170 6631 6322 378 282 51 26 chr2 98028590 98028746 -152659108 - MER110-int LTR ERV1 -2596 2051 1892 1680 134 4 40 chr2 98029052 98029329 -152658525 - AluJo SINE Alu -45 267 1 843 169 35 7 chr2 98029891 98030033 -152657821 - FRAM SINE Alu -11 165 20 1249 220 51 20 chr2 98031072 98031553 -152656301 + MLT1E LTR MaLR 3 592 -1 1689 184 3 13 chr2 98031758 98032057 -152655797 + AluJo SINE Alu 1 296 -16 301 281 91 33 chr2 98032952 98033073 -152654781 + L2 LINE L2 3137 3264 -8 1921 144 3 17 chr2 98033097 98033388 -152654466 + AluJb SINE Alu 1 287 -25 2127 105 14 3 chr2 98033638 98033933 -152653921 - AluSx SINE Alu -14 298 1 1783 99 21 0 chr2 98034185 98034427 -152653427 + L1MA5A LINE L1 6050 6296 -1 2303 101 0 3 chr2 98035680 98035978 -152651876 - AluSg SINE Alu -12 298 2 2766 64 13 0 chr2 98036364 98036877 -152650977 - L1PA8 LINE L1 -592 5539 5023 4478 67 88 2 chr2 98036877 98037455 -152650399 + L1PA8 LINE L1 5528 6159 -13 373 89 71 0 chr2 98037552 98037608 -152650246 + HY1 scRNA scRNA 51 110 -2 3152 118 68 8 chr2 98038925 98039407 -152648447 + MER9 LTR ERVK 1 511 0 39140 94 2 12 chr2 98039407 98040398 -152647456 + HERVK9 LTR ERVK 1 1000 -4916 5778 47 1 5 chr2 98040398 98041062 -152646792 - L1PA6 LINE L1 -6 6148 5487 39140 94 2 12 chr2 98041062 98045304 -152642550 + HERVK9 LTR ERVK 1000 5186 -730 558 327 0 0 chr2 98045279 98045493 -152642361 + HERVK9 LTR ERVK 5976 6189 -1764 * 3352 110 0 2 chr2 98045506 98045959 -152641895 + HERVK9 LTR ERVK 5183 5634 -282 1384 136 6 13 chr2 98045984 98046217 -152641637 + HERVK9 LTR ERVK 5608 5796 -120 7419 93 31 12 chr2 98046317 98047411 -152640443 - PABL_A-int LTR ERV1 -330 4685 3571 6716 113 5 4 chr2 98047411 98048144 -152639710 + L1PB1 LINE L1 5042 5782 -369 315 113 0 0 chr2 98048144 98048197 -152639657 + (TA)n Simple_repeat Simple_repeat 2 54 0 6716 113 5 4 chr2 98048197 98048567 -152639287 + L1PB1 LINE L1 5782 6150 -1 23 33 0 0 chr2 98048592 98048622 -152639232 + AT_rich Low_complexity Low_complexity 1 30 0 1247 154 184 0 chr2 98048629 98048895 -152638959 + MER33 DNA MER1_type 8 322 -2 255 261 169 23 chr2 98049166 98049280 -152638574 + MIR SINE MIR 19 145 -105 1285 105 0 6 chr2 98050016 98050188 -152637666 - AluSg SINE Alu -131 179 9 2085 104 3 30 chr2 98050207 98050504 -152637350 - AluSx SINE Alu -23 289 1 2044 201 76 11 chr2 98050504 98050951 -152636903 + L1ME3 LINE L1 5581 6056 -106 1006 226 35 60 chr2 98050939 98051306 -152636548 - L1ME LINE L1 -5175 895 538 * 240 35 0 0 chr2 98051318 98051347 -152636507 + (GGAA)n Simple_repeat Simple_repeat 1 29 0 2915 197 26 7 chr2 98051369 98051952 -152635902 + L1PA15-16 LINE L1 1980 2573 -4276 * 15640 23 3 0 chr2 98051949 98053774 -152634080 - L1PA4 LINE L1 -1911 4235 2406 10086 37 3 8 chr2 98053774 98055737 -152632117 + L1PA4 LINE L1 4236 6194 0 7160 228 147 22 chr2 98055880 98056798 -152631056 + L1PA15-16 LINE L1 2575 3378 -3471 1893 143 31 0 chr2 98056798 98057084 -152630770 + AluSx SINE Alu 3 297 -15 7160 228 147 22 chr2 98057084 98058895 -152628959 + L1PA15-16 LINE L1 3378 5643 -1206 907 147 83 0 chr2 98059008 98059165 -152628689 + L1PA8 LINE L1 5990 6159 -13 336 125 71 0 chr2 98059262 98059318 -152628536 + HY1 scRNA scRNA 51 110 -2 400 310 132 61 chr2 98059735 98060128 -152627726 - L2 LINE L2 -638 2676 2256 2355 92 0 0 chr2 98060142 98060437 -152627417 + AluSc SINE Alu 1 295 -14 1302 116 42 56 chr2 98060517 98060732 -152627122 - L1PA10 LINE L1 -5 6163 5952 1772 190 7 0 chr2 98060872 98061167 -152626687 - AluJo SINE Alu -13 299 3 318 173 0 0 chr2 98061257 98061309 -152626545 + L1MB4 LINE L1 5965 6016 -164 1180 181 0 15 chr2 98061317 98061521 -152626333 - AluJo SINE Alu -25 287 87 1107 126 17 6 chr2 98061521 98061696 -152626158 + L1MB3 LINE L1 6005 6181 -2 4024 152 73 6 chr2 98061743 98062441 -152625413 + L1MC2 LINE L1 5591 6335 -9 1929 123 7 14 chr2 98062466 98062750 -152625104 + AluSx SINE Alu 20 301 -11 866 283 27 5 chr2 98063473 98063602 -152624252 - MER58A DNA MER1_type -2196 224 86 2345 86 0 10 chr2 98063602 98063904 -152623950 - AluY SINE Alu -12 299 1 866 283 27 5 chr2 98063904 98063993 -152623861 - MER58A DNA MER1_type -2334 86 1 377 281 117 0 chr2 98064251 98064422 -152623432 + MIR SINE MIR 17 208 -54 1788 136 0 4 chr2 98064851 98065116 -152622738 + AluSg SINE Alu 36 299 -11 339 254 24 122 chr2 98065576 98065781 -152622073 - MIR3 SINE MIR -4 204 20 335 261 204 13 chr2 98065967 98066124 -152621730 + MIR SINE MIR 76 262 0 2043 167 12 9 chr2 98066167 98066503 -152621351 - MER1B DNA MER1_type -2 337 1 256 280 106 15 chr2 98066773 98066905 -152620949 + L2 LINE L2 2603 2746 -568 2420 159 198 16 chr2 98066905 98067460 -152620394 + L1MC3 LINE L1 6449 7104 -681 1800 126 94 18 chr2 98067477 98067818 -152620036 + L1MC3 LINE L1 7419 7785 0 2202 99 3 0 chr2 98067864 98068157 -152619697 - AluSx SINE Alu -14 298 5 764 302 103 38 chr2 98068187 98068704 -152619150 + L2 LINE L2 2781 3312 -1 418 250 164 0 chr2 98068753 98068857 -152618997 - FLAM_A SINE Alu -12 121 1 2494 56 0 0 chr2 98068869 98069174 -152618680 - AluY SINE Alu -5 306 2 324 260 110 59 chr2 98070712 98071066 -152616788 + L1MC5 LINE L1 7388 7759 -202 232 308 15 0 chr2 98071356 98071421 -152616433 + L2 LINE L2 3246 3311 -2 2449 64 0 10 chr2 98071584 98071881 -152615973 + AluSc SINE Alu 1 294 -15 246 360 122 6 chr2 98071974 98072138 -152615716 - MIR SINE MIR -33 229 47 262 329 77 39 chr2 98072556 98072711 -152615143 - L2 LINE L2 -453 2861 2701 * 840 260 71 46 chr2 98072701 98073067 -152614787 + L2 LINE L2 2937 3311 -2 2999 143 25 0 chr2 98073166 98073650 -152614204 + L1MA6 LINE L1 5557 6052 -248 930 259 74 41 chr2 98073804 98074167 -152613687 + L2 LINE L2 2937 3311 -2 3395 103 25 0 chr2 98074265 98074749 -152613105 + L1MA6 LINE L1 5557 6052 -248 925 83 33 0 chr2 98074749 98074869 -152612985 + AluSq/x SINE Alu 2 125 -187 1758 114 11 11 chr2 98074872 98075136 -152612718 + L1MA6 LINE L1 6037 6300 0 180 299 45 0 chr2 98075224 98075291 -152612563 - L2 LINE L2 -814 2500 2431 1316 214 78 22 chr2 98075432 98075754 -152612100 + L1MC4 LINE L1 6537 6876 -1166 1034 93 192 57 chr2 98075759 98075851 -152612003 + MER30 DNA MER1_type 12 90 -140 294 95 0 0 chr2 98075851 98075893 -152611961 + (CA)n Simple_repeat Simple_repeat 2 43 0 1034 93 192 57 chr2 98075893 98075924 -152611930 + MER30 DNA MER1_type 90 115 -115 2283 76 24 3 chr2 98075924 98076215 -152611639 + AluSx SINE Alu 1 297 -15 1034 93 192 57 chr2 98076215 98076283 -152611571 + MER30 DNA MER1_type 115 230 0 770 206 70 20 chr2 98076283 98076299 -152611555 + L1MC4a LINE L1 6788 6802 -1006 1855 160 0 35 chr2 98076299 98076617 -152611237 + AluJb SINE Alu 1 307 -5 770 206 70 20 chr2 98076617 98076799 -152611055 + L1MC4a LINE L1 6802 6996 -812 2159 178 81 13 chr2 98076906 98077377 -152610477 + L1MC4a LINE L1 7301 7803 -5 1059 90 0 0 chr2 98077411 98077545 -152610309 + AluSq/x SINE Alu 1 134 -178 2376 86 0 0 chr2 98077546 98077847 -152610007 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 98078395 98078416 -152609438 + AT_rich Low_complexity Low_complexity 1 21 0 205 152 0 43 chr2 98078679 98078725 -152609129 + T-rich Low_complexity Low_complexity 2 45 0 2204 111 0 0 chr2 98079538 98079836 -152608018 - AluSx SINE Alu -14 298 1 2107 132 10 0 chr2 98080035 98080331 -152607523 - AluSx SINE Alu -13 299 1 225 342 8 92 chr2 98080565 98080685 -152607169 + L2 LINE L2 3162 3271 -1 301 296 48 0 chr2 98081244 98081403 -152606451 - L1 LINE L1 -1812 4334 4167 38 47 0 35 chr2 98081937 98082022 -152605832 + AT_rich Low_complexity Low_complexity 1 82 0 1235 142 0 0 chr2 98083475 98083651 -152604203 + AluJb SINE Alu 120 295 -17 2346 103 3 0 chr2 98083995 98084305 -152603549 + AluSp SINE Alu 1 311 -2 322 303 89 56 chr2 98085043 98085430 -152602424 + L1M4 LINE L1 4421 4925 -1221 351 0 0 0 chr2 98085538 98085577 -152602277 + (TA)n Simple_repeat Simple_repeat 2 40 0 740 284 53 41 chr2 98085819 98086184 -152601670 + L2 LINE L2 1631 2054 -1260 1013 295 66 56 chr2 98086281 98086796 -152601058 - LTR67 LTR ERVL -10 547 28 390 257 110 0 chr2 98086845 98086954 -152600900 + L2 LINE L2 2188 2308 -1006 1935 150 10 3 chr2 98087103 98087409 -152600445 + AluSx SINE Alu 5 312 0 988 136 0 0 chr2 98089039 98089171 -152598683 - FLAM_C SINE Alu -1 132 1 327 206 163 28 chr2 98089211 98089352 -152598502 - L1ME4a LINE L1 -18 6103 5944 441 0 0 0 chr2 98089388 98089437 -152598417 + (TA)n Simple_repeat Simple_repeat 1 49 0 279 0 0 0 chr2 98089443 98089474 -152598380 + (T)n Simple_repeat Simple_repeat 1 31 0 273 29 0 0 chr2 98089999 98090033 -152597821 + (TA)n Simple_repeat Simple_repeat 1 34 0 23 0 0 0 chr2 98090033 98090056 -152597798 + AT_rich Low_complexity Low_complexity 1 23 0 2154 89 44 3 chr2 98090056 98090349 -152597505 - AluSx SINE Alu 0 312 8 1480 178 98 4 chr2 98090938 98091213 -152596641 - AluJo SINE Alu -11 301 1 202 351 162 7 chr2 98091331 98091479 -152596375 - L2 LINE L2 -204 3068 2898 252 178 0 0 chr2 98091633 98091678 -152596176 - L2 LINE L2 -4 3309 3265 * 255 350 104 14 chr2 98091673 98091970 -152595884 - L2 LINE L2 -467 2847 2524 1179 45 0 0 chr2 98091975 98092109 -152595745 + AluY SINE Alu 1 134 -177 2299 86 0 3 chr2 98092109 98092412 -152595442 + AluY SINE Alu 1 302 -9 215 256 25 107 chr2 98092421 98092542 -152595312 - L2 LINE L2 -93 3220 3110 1213 169 93 30 chr2 98092773 98093010 -152594844 - AluJb SINE Alu -44 268 17 677 272 92 25 chr2 98093128 98093367 -152594487 + MIR SINE MIR 5 259 -3 267 301 284 26 chr2 98093519 98094047 -152593807 - L2 LINE L2 -1124 2190 1527 381 241 179 37 chr2 98094169 98094360 -152593494 + MIR SINE MIR 4 241 -21 220 325 72 0 chr2 98094659 98094742 -152593112 - L2 LINE L2 -4 3309 3221 2048 83 58 7 chr2 98094774 98095051 -152592803 + AluSx SINE Alu 1 291 -21 182 382 0 0 chr2 98095218 98095286 -152592568 - L2 LINE L2 -236 3036 2969 315 214 324 29 chr2 98097053 98097226 -152590628 - MLT1H LTR MaLR -1 554 331 546 203 81 0 chr2 98097256 98097395 -152590459 - MLT1H LTR MaLR -346 203 12 1045 274 144 36 chr2 98097801 98098418 -152589436 + L2 LINE L2 1564 2247 -1067 460 73 0 0 chr2 98098795 98098850 -152589004 - AluSq SINE Alu -139 174 120 24 0 0 0 chr2 98098850 98098874 -152588980 + AT_rich Low_complexity Low_complexity 1 24 0 929 117 41 0 chr2 98098889 98099034 -152588820 - L1MB4 LINE L1 -3 6177 6027 1010 100 8 0 chr2 98099038 98099168 -152588686 - AluSq SINE Alu -181 131 1 1945 235 39 16 chr2 98099623 98100193 -152587661 + L1MC4 LINE L1 7460 8042 0 926 122 0 43 chr2 98100557 98100696 -152587158 + FLAM_C SINE Alu 1 133 0 2417 85 0 0 chr2 98100931 98101225 -152586629 + AluSg SINE Alu 1 294 -16 349 286 107 39 chr2 98101234 98101570 -152586284 + L1M4 LINE L1 4993 5351 -795 1599 119 4 4 chr2 98101631 98101857 -152585997 - AluSq SINE Alu -87 226 1 810 146 42 49 chr2 98101857 98102001 -152585853 - AluJo SINE Alu -167 145 3 323 190 51 0 chr2 98102008 98102087 -152585767 + L2 LINE L2 2692 2774 -540 631 228 41 23 chr2 98102113 98102284 -152585570 + MLT1D LTR MaLR 1 174 -331 490 176 0 0 chr2 98102284 98102369 -152585485 - AluSg/x SINE Alu -12 300 216 21 0 0 0 chr2 98102519 98102540 -152585314 + AT_rich Low_complexity Low_complexity 1 21 0 251 256 33 41 chr2 98102562 98102683 -152585171 + L1M4 LINE L1 3972 4091 -2055 1342 106 8 91 chr2 98103203 98103467 -152584387 - L1MA7 LINE L1 0 6291 6050 2113 137 0 0 chr2 98104009 98104302 -152583552 - AluSx SINE Alu -17 295 3 1025 74 7 0 chr2 98104790 98104938 -152582916 + (TCTA)n Simple_repeat Simple_repeat 4 152 0 1999 192 14 10 chr2 98104946 98105408 -152582446 - MER74A LTR ERVL -11 547 5 1020 139 0 0 chr2 98105418 98105590 -152582264 + (TCCA)n Simple_repeat Simple_repeat 4 175 0 1765 139 20 34 chr2 98106068 98106176 -152581678 + AluJb SINE Alu 1 109 -203 2338 116 41 41 chr2 98106176 98106539 -152581315 + THE1B LTR MaLR 2 364 0 1765 139 20 34 chr2 98106539 98106724 -152581130 + AluJb SINE Alu 109 290 -22 2493 102 51 20 chr2 98107209 98107562 -152580292 - THE1B LTR MaLR 0 364 1 1110 178 30 0 chr2 98107877 98108079 -152579775 + L1M1 LINE L1 16 223 -7342 335 289 96 20 chr2 98108104 98108301 -152579553 + L1ME4a LINE L1 5739 5950 -171 33 43 0 0 chr2 98108371 98108418 -152579436 + AT_rich Low_complexity Low_complexity 1 47 0 279 0 0 0 chr2 98108434 98108465 -152579389 + (A)n Simple_repeat Simple_repeat 1 31 0 2753 144 113 11 chr2 98108469 98108921 -152578933 + MER1A DNA MER1_type 32 529 0 10005 163 27 31 chr2 98108927 98110098 -152577756 + L1M1 LINE L1 221 1395 -6170 2451 121 113 15 chr2 98110098 98110488 -152577366 + MSTA LTR MaLR 1 428 0 10005 163 27 31 chr2 98110488 98111777 -152576077 + L1M1 LINE L1 1395 3344 -4221 1245 68 0 0 chr2 98111777 98111925 -152575929 + AluY SINE Alu 132 279 -32 261 75 0 0 chr2 98111925 98111965 -152575889 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 4510 176 34 15 chr2 98111971 98113097 -152574757 + L1M1 LINE L1 3331 4484 -3081 1760 161 46 67 chr2 98113097 98113469 -152574385 + THE1B LTR MaLR 1 364 0 4510 176 34 15 chr2 98113469 98113579 -152574275 + L1M1 LINE L1 4484 4590 -2975 845 308 75 6 chr2 98113679 98114040 -152573814 - L2 LINE L2 -384 2930 2545 2027 146 7 0 chr2 98114040 98114348 -152573506 - AluSp SINE Alu -3 310 1 1906 162 3 13 chr2 98114388 98114690 -152573164 - AluJb SINE Alu -13 299 1 295 71 18 18 chr2 98115050 98115106 -152572748 + (TTTTA)n Simple_repeat Simple_repeat 1 56 0 7799 19 0 1 chr2 98115106 98116116 -152571738 - L1PA3 LINE L1 -24 6131 5123 1082 127 51 41 chr2 98116194 98116391 -152571463 + L1PA16 LINE L1 5968 6166 0 1758 154 7 7 chr2 98116458 98116738 -152571116 + AluJo SINE Alu 21 300 -12 305 323 24 30 chr2 98117509 98117673 -152570181 - MIR3 SINE MIR -14 194 32 2096 124 0 0 chr2 98117707 98117989 -152569865 - AluSx SINE Alu -16 296 15 798 142 0 64 chr2 98118201 98118342 -152569512 - FLAM_A SINE Alu 0 133 2 2378 84 3 3 chr2 98118701 98119000 -152568854 - AluSq SINE Alu -14 299 1 1007 161 30 50 chr2 98120086 98120285 -152567569 + AluJb SINE Alu 96 290 -22 450 94 0 0 chr2 98120285 98120349 -152567505 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 283 322 62 47 chr2 98120430 98120688 -152567166 + L2 LINE L2 2268 2529 -785 272 152 22 0 chr2 98120947 98120993 -152566861 + L2 LINE L2 3267 3313 0 202 267 0 0 chr2 98120993 98121038 -152566816 + (TGAG)n Simple_repeat Simple_repeat 2 46 0 1266 264 71 35 chr2 98123246 98123652 -152564202 - LTR16C LTR ERVL 0 491 71 2292 80 7 26 chr2 98123894 98124196 -152563658 - AluSp SINE Alu -17 296 1 1910 172 0 3 chr2 98124441 98124738 -152563116 + AluJb SINE Alu 1 296 -16 2190 153 134 15 chr2 98124820 98125231 -152562623 - LTR46 LTR ERV1 0 460 1 208 135 0 0 chr2 98125242 98125279 -152562575 + (A)n Simple_repeat Simple_repeat 1 37 0 693 172 0 73 chr2 98125502 98125653 -152562201 - MER21-int LTR ERV1 -2395 1796 1657 606 235 24 48 chr2 98125689 98125734 -152562120 - MER21-int LTR ERV1 -2384 1807 1762 2217 111 0 0 chr2 98125734 98126022 -152561832 + AluSx SINE Alu 1 288 -24 606 235 24 48 chr2 98126022 98126142 -152561712 - MER21-int LTR ERV1 -2429 1762 1646 2083 190 38 89 chr2 98126225 98126705 -152561149 - MER21-int LTR ERV1 -2554 1637 1189 2084 108 0 82 chr2 98126705 98127046 -152560808 - AluSq SINE Alu 0 313 1 2083 190 38 89 chr2 98127046 98127140 -152560714 - MER21-int LTR ERV1 -3002 1189 1092 2834 104 15 2 chr2 98127140 98127533 -152560321 - L1PA16 LINE L1 0 6166 5769 12787 77 2 2 chr2 98127534 98127910 -152559944 - L1PA7 LINE L1 -2 6152 5777 2416 86 0 3 chr2 98127910 98128214 -152559640 - AluY SINE Alu -8 303 1 12787 77 2 2 chr2 98128214 98130235 -152557619 - L1PA7 LINE L1 -376 5778 3768 3668 108 22 3 chr2 98130235 98130831 -152557023 - L1PA16 LINE L1 -384 5782 5176 555 240 58 67 chr2 98180947 98181202 -152506652 + L1MC/D LINE L1 5033 5286 -860 2057 114 0 10 chr2 98181202 98181491 -152506363 + AluSc SINE Alu 1 286 -23 555 240 58 67 chr2 98181491 98181564 -152506290 + L1MC/D LINE L1 5286 5358 -788 401 323 159 34 chr2 98181576 98181991 -152505863 + L1MC/D LINE L1 5345 5811 -1997 376 106 0 0 chr2 98182126 98182192 -152505662 + L1MA7 LINE L1 6221 6286 -5 317 175 0 0 chr2 98182199 98182262 -152505592 + L1M4 LINE L1 1544 1606 -5253 1986 192 31 118 chr2 98182270 98182811 -152505043 - L1M4b LINE L1 -5398 1461 992 1804 147 32 29 chr2 98182811 98183158 -152504696 - L1MA9 LINE L1 -7 6305 5958 1986 192 31 118 chr2 98183158 98183314 -152504540 - L1M4b LINE L1 -5867 992 824 319 231 0 0 chr2 98183353 98183431 -152504423 + L1ME LINE L1 5623 5700 -421 2564 233 55 45 chr2 98184195 98184695 -152503159 + L1M4 LINE L1 4619 5113 -1844 2196 110 0 0 chr2 98184695 98184985 -152502869 + AluSx SINE Alu 1 290 -22 2564 233 55 45 chr2 98184985 98184996 -152502858 + L1M4 LINE L1 5113 5122 -1835 1806 149 19 29 chr2 98184996 98185311 -152502543 + AluJo SINE Alu 1 312 0 2564 233 55 45 chr2 98185311 98185697 -152502157 + L1M4 LINE L1 5122 5526 -1431 52 17 0 0 chr2 98186003 98186062 -152501792 + AT_rich Low_complexity Low_complexity 1 59 0 192 77 0 0 chr2 98187159 98187185 -152500669 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 17126 62 7 21 chr2 98188434 98190694 -152497160 - L1P LINE L1 -3914 2232 5 334 178 63 138 chr2 98190676 98190850 -152497004 - L1M4 LINE L1 -3038 3108 2948 * 23 33 0 0 chr2 98191431 98191461 -152496393 + AT_rich Low_complexity Low_complexity 1 30 0 2463 80 0 3 chr2 98192355 98192667 -152495187 - AluSq SINE Alu -2 311 1 231 36 0 0 chr2 98192702 98192730 -152495124 + (TG)n Simple_repeat Simple_repeat 1 28 0 2090 118 17 0 chr2 98193032 98193321 -152494533 + AluSg SINE Alu 1 294 -16 27 0 0 0 chr2 98193592 98193619 -152494235 + AT_rich Low_complexity Low_complexity 1 27 0 192 335 92 56 chr2 98194341 98194625 -152493229 + L2 LINE L2 2192 2485 -829 309 171 0 0 chr2 98194950 98195006 -152492848 - MER83B LTR ERV1 -97 276 221 1184 133 0 6 chr2 98195481 98195654 -152492200 - AluSc SINE Alu 0 309 138 231 279 131 0 chr2 98195661 98195722 -152492132 + L2 LINE L2 3204 3272 0 362 283 17 17 chr2 98195785 98195905 -152491949 + MARNA DNA Mariner 121 240 -346 2210 94 0 7 chr2 98195905 98196214 -152491640 - AluSg SINE Alu -3 307 1 1921 81 0 8 chr2 98196342 98196589 -152491265 + AluY SINE Alu 1 245 -66 830 191 60 38 chr2 98197796 98197979 -152489875 + MER5A DNA MER1_type 2 188 -1 377 291 164 8 chr2 98198005 98198139 -152489715 + MER5A DNA MER1_type 35 189 0 2114 158 27 24 chr2 98198576 98198925 -152488929 - L1MA7 LINE L1 -131 6160 5808 2271 101 0 62 chr2 98198925 98199283 -152488571 + MER1B DNA MER1_type 2 337 0 2114 158 27 24 chr2 98199283 98199344 -152488510 - L1MA7 LINE L1 -483 5808 5749 395 167 83 12 chr2 98199344 98199410 -152488444 - L1M4b LINE L1 -5299 1560 1485 2391 76 0 13 chr2 98199410 98199713 -152488141 + AluY SINE Alu 1 299 -12 395 167 83 12 chr2 98199713 98199730 -152488124 - L1M4b LINE L1 -5374 1485 1471 232 292 69 8 chr2 98199745 98199875 -152487979 + L1MEc LINE L1 1823 1960 -4436 9877 211 68 13 chr2 98199913 98201745 -152486109 + L1MB7 LINE L1 2513 4243 -1935 2223 112 3 0 chr2 98201745 98202039 -152485815 + AluSc SINE Alu 1 295 -14 9877 211 68 13 chr2 98202039 98202841 -152485013 + L1MB7 LINE L1 4243 4999 -1179 1600 169 79 0 chr2 98202841 98203107 -152484747 + AluJb SINE Alu 9 295 -17 9877 211 68 13 chr2 98203107 98203762 -152484092 + L1MB7 LINE L1 4999 5991 -187 1849 156 7 7 chr2 98203931 98204238 -152483616 - AluJb SINE Alu -5 307 1 530 160 235 0 chr2 98204240 98204359 -152483495 + L1MB7 LINE L1 6028 6174 -10 830 241 55 0 chr2 98204516 98204715 -152483139 + MER20 DNA MER1_type 10 219 0 309 289 39 58 chr2 98204731 98204887 -152482967 - L1ME LINE L1 -690 5431 5279 1006 234 13 19 chr2 98205304 98205616 -152482238 + L1MD2 LINE L1 4942 5251 -895 17313 93 4 6 chr2 98205616 98207582 -152480272 + Charlie3 DNA MER1_type 1 1963 -743 1945 96 41 0 chr2 98207582 98207852 -152480002 + AluSx SINE Alu 23 303 -9 17313 93 4 6 chr2 98207852 98208191 -152479663 + Charlie3 DNA MER1_type 1963 2301 -405 1755 75 9 0 chr2 98208192 98208418 -152479436 + AluSg/x SINE Alu 71 298 -12 767 282 212 42 chr2 98208840 98209486 -152478368 + L2 LINE L2 1701 2456 -858 262 91 0 0 chr2 98209680 98209713 -152478141 + MSTB LTR MaLR 123 155 -271 237 295 134 40 chr2 98210506 98210655 -152477199 + L1MEd LINE L1 633 795 -5735 2512 155 12 139 chr2 98210699 98211338 -152476516 + LTR6A LTR ERV1 1 564 0 911 275 88 37 chr2 98211352 98211974 -152475880 + L1MEd LINE L1 949 1602 -4928 1205 147 110 46 chr2 98212015 98212342 -152475512 + L1MEd LINE L1 2210 2557 -3983 1933 205 156 14 chr2 98212342 98212893 -152474961 + L1MD2 LINE L1 5708 6336 -23 304 306 16 33 chr2 98212906 98213027 -152474827 + MER5B DNA MER1_type 50 168 -10 2347 175 21 7 chr2 98213041 98213459 -152474395 + MSTB LTR MaLR 1 424 -2 2128 101 11 7 chr2 98213774 98214053 -152473801 + AluSg SINE Alu 1 283 -27 180 0 0 0 chr2 98214053 98214073 -152473781 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1790 186 0 13 chr2 98214127 98214439 -152473415 + AluJb SINE Alu 1 308 -4 684 221 128 105 chr2 98214667 98214887 -152472967 + L1ME4a LINE L1 4692 4924 -1222 589 139 0 19 chr2 98214887 98214995 -152472859 + L1PA13 LINE L1 6056 6161 -2 684 221 128 105 chr2 98214995 98215127 -152472727 + L1ME4a LINE L1 4924 5052 -1094 669 245 124 26 chr2 98215272 98215505 -152472349 + L2 LINE L2 3011 3266 -47 516 265 52 7 chr2 98215565 98215701 -152472153 + L2 LINE L2 3171 3312 -1 22 35 0 0 chr2 98216891 98216920 -152470934 + AT_rich Low_complexity Low_complexity 1 29 0 2207 105 0 7 chr2 98217670 98217965 -152469889 - AluSg SINE Alu -17 293 1 23 78 0 0 chr2 98218135 98218186 -152469668 + AT_rich Low_complexity Low_complexity 1 51 0 1305 245 55 12 chr2 98219981 98220308 -152467546 - MER58B DNA MER1_type 0 341 1 355 348 156 26 chr2 98220549 98221521 -152466333 - L2 LINE L2 -683 2631 1533 23 0 0 0 chr2 98223440 98223463 -152464391 + AT_rich Low_complexity Low_complexity 1 23 0 233 325 36 66 chr2 98224322 98224488 -152463366 + L2 LINE L2 2545 2705 -609 339 117 0 2 chr2 98224860 98224914 -152462940 + AluJ/FLAM SINE Alu 30 76 -226 1931 120 32 0 chr2 98225063 98225346 -152462508 + AluSx SINE Alu 5 296 -16 276 317 162 11 chr2 98226588 98226853 -152461001 + L1ME4a LINE L1 5255 5559 -2249 481 153 153 0 chr2 98227039 98227124 -152460730 + FLAM_C SINE Alu 22 119 -24 261 0 0 0 chr2 98227124 98227153 -152460701 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 255 275 81 27 chr2 98227303 98227452 -152460402 + L1ME4a LINE L1 5779 5935 -186 196 276 79 53 chr2 98227690 98227766 -152460088 - MIR SINE MIR 0 262 185 1140 108 151 5 chr2 98228241 98228453 -152459401 - L1MC3 LINE L1 -1 7784 7542 539 321 83 15 chr2 98229630 98229954 -152457900 + L2 LINE L2 2041 2386 -928 2302 101 0 0 chr2 98231285 98231581 -152456273 + AluSx SINE Alu 1 296 -16 782 110 81 15 chr2 98232754 98232890 -152454964 + L1PA10 LINE L1 6015 6159 -9 22 0 0 0 chr2 98232956 98232978 -152454876 + AT_rich Low_complexity Low_complexity 1 22 0 1514 191 38 0 chr2 98234037 98234352 -152453502 - L1MB1 LINE L1 -38 6130 5804 652 203 68 31 chr2 98234354 98234576 -152453278 - L1M3c LINE L1 -4574 1567 1338 576 242 0 0 chr2 98234591 98234715 -152453139 + FLAM_C SINE Alu 1 124 -19 2473 52 7 7 chr2 98234787 98235095 -152452759 - AluY SINE Alu -3 308 1 4121 194 118 43 chr2 98235095 98236792 -152451062 - L1MC2 LINE L1 -171 6567 16 321 351 68 45 chr2 98236864 98237086 -152450768 + MIR SINE MIR 17 243 -19 784 280 159 18 chr2 98237773 98238170 -152449684 + L1MC4a LINE L1 5256 5708 -2100 317 183 17 0 chr2 98238164 98238224 -152449630 - L1MC4a LINE L1 -1894 5914 5854 * 195 348 0 0 chr2 98238749 98238818 -152449036 - MER5A DNA MER1_type -111 78 10 1348 181 70 0 chr2 98238992 98239251 -152448603 - AluJo SINE Alu -35 277 1 2001 203 85 42 chr2 98239564 98239947 -152447907 + MLT1F1 LTR MaLR 1 415 -152 1995 139 0 3 chr2 98239947 98240249 -152447605 - AluSx SINE Alu -11 301 1 2001 203 85 42 chr2 98240249 98240407 -152447447 + MLT1F1 LTR MaLR 415 565 -2 1749 160 14 10 chr2 98241347 98241635 -152446219 - AluSx SINE Alu -23 289 1 24 32 0 0 chr2 98241738 98241769 -152446085 + AT_rich Low_complexity Low_complexity 1 31 0 2133 115 3 0 chr2 98242001 98242297 -152445557 + AluSx SINE Alu 1 297 -15 287 316 72 0 chr2 98242780 98242932 -152444922 + L1M4 LINE L1 4733 4895 -1251 1616 120 30 0 chr2 98243152 98243419 -152444435 - L1MA4 LINE L1 -6 6294 6020 1012 98 0 0 chr2 98243419 98243562 -152444292 - L1MA4 LINE L1 -562 5738 5596 236 226 65 21 chr2 98244261 98244354 -152443500 + L1MC4a LINE L1 6083 6179 -1629 27 49 0 0 chr2 98244523 98244564 -152443290 + AT_rich Low_complexity Low_complexity 1 41 0 2187 120 0 0 chr2 98244572 98244872 -152442982 + AluSx SINE Alu 1 300 -12 192 152 0 0 chr2 98244877 98244910 -152442944 + (TA)n Simple_repeat Simple_repeat 2 34 0 196 402 103 0 chr2 98245130 98245217 -152442637 - L2 LINE L2 -38 3234 3139 304 257 29 81 chr2 98245300 98245436 -152442418 - L2 LINE L2 -2 3311 3183 2763 203 63 20 chr2 98246999 98247829 -152440025 - L1MD2 LINE L1 -10 6626 5780 207 139 0 0 chr2 98247858 98247894 -152439960 + (TA)n Simple_repeat Simple_repeat 1 36 0 1627 160 40 4 chr2 98247894 98248169 -152439685 - AluSx SINE Alu -27 285 1 1515 231 56 5 chr2 98248175 98248587 -152439267 - L1MD2 LINE L1 -986 5554 5122 3446 176 146 19 chr2 98248593 98248905 -152438949 - L1MD2 LINE L1 -4078 2462 2191 1563 185 3 41 chr2 98248905 98249219 -152438635 + AluJb SINE Alu 6 307 -5 3446 176 146 19 chr2 98249219 98249914 -152437940 - L1MD2 LINE L1 -4349 2191 1327 3529 160 40 21 chr2 98249922 98250812 -152437042 - L1MB4 LINE L1 -2 6178 5215 823 164 13 7 chr2 98250817 98250969 -152436885 - L1MC2 LINE L1 -11 6333 6181 1694 127 0 4 chr2 98251070 98251306 -152436548 - AluSq SINE Alu -35 278 44 549 259 82 54 chr2 98251306 98251945 -152435909 - L1M4 LINE L1 -3911 3046 2476 1188 165 145 41 chr2 98251989 98252231 -152435623 + Tigger7 DNA MER2_type 1 267 -466 476 180 20 40 chr2 98252231 98252331 -152435523 + Tigger7 DNA MER2_type 2390 2487 0 2093 240 38 41 chr2 98252445 98253466 -152434388 - L1M4 LINE L1 -4536 2423 1432 880 333 43 28 chr2 98253720 98254227 -152433627 + L1MA4 LINE L1 509 1023 -5756 15142 180 50 20 chr2 98254565 98258903 -152428951 + L1MA4 LINE L1 1576 6242 -760 2768 118 26 12 chr2 98258903 98259327 -152428527 - MER57B LTR ERV1 -4 430 1 15142 180 50 20 chr2 98259327 98260107 -152427747 + L1MA4 LINE L1 6242 6997 -5 13036 185 19 4 chr2 98260215 98264472 -152423382 + L1PA13 LINE L1 697 5032 -1765 5220 115 53 7 chr2 98264575 98264700 -152423154 + L1PA13 LINE L1 5187 5305 -1509 2273 105 0 7 chr2 98264700 98264996 -152422858 + AluSx SINE Alu 1 294 -18 5220 115 53 7 chr2 98264996 98266463 -152421391 + L1PA13 LINE L1 5305 6814 0 2196 131 78 53 chr2 98266657 98267092 -152420762 - Tigger2 DNA MER2_type 0 2718 2273 463 119 0 15 chr2 98267082 98267149 -152420705 - Tigger2 DNA MER2_type -2649 69 4 * 261 231 88 44 chr2 98268102 98268193 -152419661 + L2 LINE L2 3214 3308 -5 333 0 0 0 chr2 98268843 98268880 -152418974 + (CA)n Simple_repeat Simple_repeat 2 38 0 272 132 53 0 chr2 98268880 98268950 -152418904 + (TA)n Simple_repeat Simple_repeat 1 74 0 322 233 43 26 chr2 98268989 98269105 -152418749 + L1MC4 LINE L1 6586 6703 -1339 346 238 7 7 chr2 98269180 98269331 -152418523 + (TA)n Simple_repeat Simple_repeat 1 151 0 2446 80 0 6 chr2 98269703 98270015 -152417839 + AluSg SINE Alu 1 310 0 2212 246 73 23 chr2 98270840 98271629 -152416225 - L1ME3A LINE L1 -251 5919 5171 2363 100 0 0 chr2 98271629 98271938 -152415916 + AluSg SINE Alu 1 309 -1 2212 246 73 23 chr2 98271938 98272613 -152415241 - L1ME3A LINE L1 -999 5171 4383 566 193 125 28 chr2 98272651 98272827 -152415027 - L1ME LINE L1 -687 5544 5352 2011 60 78 11 chr2 98272832 98273101 -152414753 - AluY SINE Alu -24 287 1 1199 257 112 53 chr2 98273139 98273244 -152414610 - L1ME LINE L1 -1031 5184 5087 2614 43 0 0 chr2 98273244 98273544 -152414310 - AluY SINE Alu -11 300 1 1199 257 112 53 chr2 98273544 98274357 -152413497 - L1ME LINE L1 -1128 5087 4212 607 293 61 57 chr2 98274397 98274746 -152413108 - L1ME LINE L1 -2123 4092 3739 2436 78 3 0 chr2 98274746 98275052 -152412802 - AluSp SINE Alu -6 307 1 607 293 61 57 chr2 98275052 98275227 -152412627 - L1ME LINE L1 -2476 3739 3566 399 221 52 90 chr2 98275421 98275614 -152412240 - L1ME LINE L1 -2922 3293 3113 2376 93 0 6 chr2 98275614 98275927 -152411927 - AluY SINE Alu 0 311 1 399 221 52 90 chr2 98275927 98276022 -152411832 - L1ME LINE L1 -3102 3113 3016 610 257 140 15 chr2 98276050 98276457 -152411397 - L1MEc LINE L1 -3646 2569 2136 588 260 54 8 chr2 98276900 98277077 -152410777 - L1ME2 LINE L1 -54 6108 5920 5048 176 48 5 chr2 98277077 98278113 -152409741 + Tigger6a DNA MER2_type 2 1082 -1 588 260 54 8 chr2 98278113 98278142 -152409712 - L1ME2 LINE L1 -242 5920 5894 2136 101 4 0 chr2 98278144 98278422 -152409432 + AluSg SINE Alu 1 279 -31 499 171 0 9 chr2 98278422 98278527 -152409327 - L1 LINE L1 -2807 3339 3236 23 0 0 0 chr2 98278655 98278678 -152409176 + AT_rich Low_complexity Low_complexity 1 23 0 15804 146 64 6 chr2 98278678 98282680 -152405174 - L1PB1 LINE L1 0 6867 2344 264 100 0 0 chr2 98282680 98282720 -152405134 + (TATG)n Simple_repeat Simple_repeat 2 41 0 15804 146 64 6 chr2 98282720 98285208 -152402646 - L1PB1 LINE L1 -4523 2344 1 862 236 55 38 chr2 98285214 98285506 -152402348 - L1ME2 LINE L1 -345 5821 5525 594 215 18 91 chr2 98285508 98285583 -152402271 + MER105 DNA DNA 1 80 -124 1640 107 139 48 chr2 98285583 98285892 -152401962 - MER44D DNA MER2_type -1 608 2 594 215 18 91 chr2 98285892 98286035 -152401819 + MER105 DNA DNA 80 203 -1 839 217 112 4 chr2 98286051 98286383 -152401471 - L1ME2 LINE L1 -639 5525 5155 878 219 0 0 chr2 98286384 98286548 -152401306 - FRAM SINE Alu -18 158 1 2087 129 3 0 chr2 98286556 98286859 -152400995 - AluSp SINE Alu -9 304 1 2388 75 0 0 chr2 98286868 98287161 -152400693 - AluY SINE Alu -18 293 1 346 156 31 0 chr2 98287167 98287231 -152400623 - FLAM_A SINE Alu -3 130 65 998 252 39 7 chr2 98287231 98287540 -152400314 - L1ME2 LINE L1 -1885 4261 3943 1226 77 112 15 chr2 98287640 98287836 -152400018 - AluSc SINE Alu -91 218 4 3711 219 45 36 chr2 98287842 98288588 -152399266 - L1M4 LINE L1 -841 5305 4544 1818 182 0 7 chr2 98288588 98288890 -152398964 - AluJb SINE Alu -12 300 1 3711 219 45 36 chr2 98288890 98289283 -152398571 - L1M4 LINE L1 -1602 4544 4156 575 136 0 0 chr2 98289304 98289385 -152398469 + AluJb SINE Alu 212 292 -20 205 307 0 34 chr2 98289890 98289978 -152397876 + MIR SINE MIR 178 262 0 210 395 45 25 chr2 98290114 98290271 -152397583 - MIR3 SINE MIR -7 201 42 1071 56 0 0 chr2 98291226 98291352 -152396502 - AluY SINE Alu -14 297 172 2231 107 0 7 chr2 98291648 98291947 -152395907 - AluSq SINE Alu -16 297 1 2515 145 19 51 chr2 98292127 98292421 -152395433 - MLT1C LTR MaLR -3 464 189 2369 104 0 0 chr2 98292421 98292728 -152395126 - AluSq SINE Alu -6 307 1 2515 145 19 51 chr2 98292728 98292903 -152394951 - MLT1C LTR MaLR -278 189 10 680 281 94 27 chr2 98293053 98293455 -152394399 - L1MEc LINE L1 -5875 521 93 381 286 136 14 chr2 98294055 98294195 -152393659 + MIR SINE MIR 31 187 -75 21 0 0 0 chr2 98296202 98296223 -152391631 + AT_rich Low_complexity Low_complexity 1 21 0 1546 219 50 26 chr2 98296344 98296727 -152391127 - MLT1D LTR MaLR -1 504 113 734 234 102 62 chr2 98296959 98297408 -152390446 + L1ME4a LINE L1 5608 6074 -47 180 214 0 0 chr2 98297647 98297703 -152390151 + (CATA)n Simple_repeat Simple_repeat 4 59 0 2037 97 19 36 chr2 98297748 98298046 -152389808 + AluSq SINE Alu 1 295 -18 531 55 44 0 chr2 98298046 98298137 -152389717 + (TCTA)n Simple_repeat Simple_repeat 1 95 0 2667 238 62 15 chr2 98298149 98298935 -152388919 + L1ME3 LINE L1 5310 6132 -30 647 141 0 0 chr2 98299245 98299369 -152388485 - AluSg/x SINE Alu 0 316 193 229 301 54 32 chr2 98299506 98299599 -152388255 + L2 LINE L2 3195 3289 -24 180 111 0 0 chr2 98300194 98300221 -152387633 + (TA)n Simple_repeat Simple_repeat 1 27 0 228 396 108 7 chr2 98301086 98301225 -152386629 - L2 LINE L2 -3 3269 3117 2533 224 72 30 chr2 98301248 98302303 -152385551 + L1MCa LINE L1 2245 3336 -3090 2101 110 7 13 chr2 98302306 98302628 -152385226 + AluSq SINE Alu 1 313 0 10540 209 32 19 chr2 98302641 98305555 -152382299 + L1 LINE L1 1733 4677 -1469 2275 148 31 36 chr2 98305556 98306108 -152381746 + LTR10E LTR ERV1 1 602 0 2719 210 21 4 chr2 98306108 98306779 -152381075 + L1 LINE L1 4675 5353 -801 608 103 0 0 chr2 98306781 98306868 -152380986 - AluSg/x SINE Alu -10 302 216 2183 100 17 3 chr2 98307449 98307740 -152380114 - AluSx SINE Alu -17 295 1 1506 271 25 23 chr2 98307779 98308571 -152379283 + L1M4 LINE L1 1143 1921 -4725 * 9560 96 7 6 chr2 98308570 98309974 -152377880 + L1P LINE L1 1787 3191 -2955 * 26476 62 5 4 chr2 98309958 98314485 -152373369 + L1PA7 LINE L1 1619 6154 0 306 307 42 5 chr2 98314482 98314671 -152373183 + L1M4 LINE L1 2056 2251 -4574 * 1134 151 0 28 chr2 98315033 98315245 -152372609 + MER46A DNA MER2_type 31 236 0 8180 225 75 33 chr2 98315283 98315548 -152372306 + L1MA9 LINE L1 2341 2594 -4216 2016 150 26 3 chr2 98315548 98315888 -152371966 + MER7A DNA MER2_type 1 346 0 8180 225 75 33 chr2 98315888 98317225 -152370629 + L1MA9 LINE L1 2594 3874 -2936 2280 41 0 11 chr2 98317225 98317494 -152370360 + AluY SINE Alu 29 294 -17 252 0 0 0 chr2 98317497 98317525 -152370329 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1736 173 25 0 chr2 98317528 98317805 -152370049 + AluJb SINE Alu 2 285 -27 8180 225 75 33 chr2 98317805 98320482 -152367372 + L1MA9 LINE L1 3876 6805 -5 198 103 0 0 chr2 98320516 98320545 -152367309 + (GA)n Simple_repeat Simple_repeat 2 30 0 976 170 21 21 chr2 98320545 98320733 -152367121 + AluJb SINE Alu 120 307 -5 5395 208 29 91 chr2 98320741 98320775 -152367079 + L1M4 LINE L1 3642 3677 -2967 2360 77 0 7 chr2 98320775 98321074 -152366780 + AluY SINE Alu 1 297 -14 5395 208 29 91 chr2 98321074 98323032 -152364822 + L1M4 LINE L1 3677 5509 -1135 788 177 12 6 chr2 98323047 98323211 -152364643 + L1MB8 LINE L1 6014 6178 0 754 216 147 18 chr2 98323211 98323659 -152364195 + L1ME LINE L1 2950 3455 -2691 2156 123 3 3 chr2 98323659 98323951 -152363903 + AluSg SINE Alu 1 292 -18 333 62 0 0 chr2 98323953 98324001 -152363853 + (TA)n Simple_repeat Simple_repeat 2 49 0 265 111 0 0 chr2 98324053 98324098 -152363756 + Alu SINE Alu 252 296 -6 3696 215 68 62 chr2 98324132 98324256 -152363598 + L1ME LINE L1 3846 3968 -2194 2140 98 0 14 chr2 98324256 98324541 -152363313 + AluSx SINE Alu 1 281 -31 3696 215 68 62 chr2 98324541 98324617 -152363237 + L1ME LINE L1 3968 4042 -2120 1564 110 0 5 chr2 98324617 98324836 -152363018 + AluSg/x SINE Alu 82 299 -11 3696 215 68 62 chr2 98324836 98326334 -152361520 + L1ME LINE L1 4042 5570 -592 875 93 7 0 chr2 98326340 98326479 -152361375 - L1MA2 LINE L1 -103 6201 6062 772 184 18 0 chr2 98326478 98326641 -152361213 + L1ME LINE L1 5573 5738 -428 * 1522 170 44 28 chr2 98326641 98326959 -152360895 + MLT1B LTR MaLR 1 323 -67 354 268 44 44 chr2 98326964 98327169 -152360685 + L1M4 LINE L1 2507 2711 -3435 22 35 0 0 chr2 98327674 98327703 -152360151 + AT_rich Low_complexity Low_complexity 1 29 0 10478 199 19 102 chr2 98327749 98327937 -152359917 - L1PB1 LINE L1 0 6867 6665 2682 20 0 0 chr2 98327937 98328238 -152359616 - AluYa5 SINE Alu -10 301 1 10478 199 19 102 chr2 98328238 98331347 -152356507 - L1PB1 LINE L1 -202 6665 3297 195 42 0 0 chr2 98331347 98331371 -152356483 + (ATG)n Simple_repeat Simple_repeat 2 25 0 2007 128 0 27 chr2 98331380 98331537 -152356317 - AluSx SINE Alu -23 289 142 2239 124 0 6 chr2 98331537 98331851 -152356003 - AluSx SINE Alu 0 312 1 2007 128 0 27 chr2 98331851 98331990 -152355864 - AluSx SINE Alu -170 142 1 10478 199 19 102 chr2 98331990 98332092 -152355762 - L1PB1 LINE L1 -3578 3289 3180 2076 102 14 0 chr2 98332092 98332376 -152355478 + AluY SINE Alu 1 288 -23 10478 199 19 102 chr2 98332376 98333910 -152353944 - L1PB1 LINE L1 -3687 3180 2326 203 152 0 0 chr2 98334020 98334053 -152353801 + (CA)n Simple_repeat Simple_repeat 1 33 0 1297 89 25 0 chr2 98334086 98334289 -152353565 - L1PB1 LINE L1 -4621 2242 2035 1979 102 8 0 chr2 98334289 98334553 -152353301 + AluSx SINE Alu 1 266 -46 291 159 0 0 chr2 98334553 98334597 -152353257 - L1PB1 LINE L1 -5457 1406 1363 4070 197 78 0 chr2 98334606 98335504 -152352350 - L1PB1 LINE L1 -5895 968 1 296 215 41 50 chr2 98335694 98335815 -152352039 - L1MC4 LINE L1 0 8042 7923 3265 236 109 43 chr2 98335917 98336122 -152351732 - L1MC4a LINE L1 -743 5403 5213 2052 46 0 4 chr2 98336122 98336363 -152351491 - AluY SINE Alu -3 308 69 3265 236 109 43 chr2 98336363 98337860 -152349994 - L1MC4a LINE L1 -933 5213 4741 393 204 108 21 chr2 98337883 98337976 -152349878 + MER63 DNA MER1_type 1 727 -335 694 315 82 25 chr2 98337990 98338390 -152349464 - L1MC4a LINE L1 -3533 2613 2191 17315 38 3 1 chr2 98338416 98341306 -152346548 - L1PA5 LINE L1 0 6154 3257 24159 81 20 17 chr2 98341306 98342564 -152345290 - L1P LINE L1 -2541 3605 2353 2431 85 0 0 chr2 98342564 98342858 -152344996 + AluSg1 SINE Alu 1 294 -15 24159 81 20 17 chr2 98342858 98345182 -152342672 - L1P LINE L1 -3793 2353 11 2041 129 3 10 chr2 98345192 98345495 -152342359 - AluSq SINE Alu -12 301 1 1111 96 0 0 chr2 98345495 98345631 -152342223 - AluSq/x SINE Alu -176 136 1 1771 168 7 31 chr2 98345667 98345959 -152341895 + AluJb SINE Alu 3 287 -25 988 172 14 33 chr2 98346292 98346509 -152341345 - L1ME1 LINE L1 -193 5973 5768 1990 156 3 7 chr2 98346523 98346831 -152341023 + AluSx SINE Alu 1 307 -5 1203 236 144 26 chr2 98346835 98347336 -152340518 - L1MD2 LINE L1 -29 6330 5771 22 35 0 0 chr2 98348180 98348209 -152339645 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 98349905 98349929 -152337925 + AT_rich Low_complexity Low_complexity 1 24 0 484 121 0 0 chr2 98350212 98350295 -152337559 - AluJ/FRAM SINE Alu -1 311 229 1031 210 0 19 chr2 98350446 98350651 -152337203 - AluJo SINE Alu -111 201 1 322 276 30 96 chr2 98351315 98351514 -152336340 - MIR SINE MIR -75 187 2 2308 103 10 0 chr2 98352241 98352542 -152335312 + AluSx SINE Alu 1 304 -8 18725 39 4 5 chr2 98352653 98355116 -152332738 - L1PA4 LINE L1 -2014 4132 1674 7541 32 1 14 chr2 98355114 98356111 -152331743 + L1PA4 LINE L1 4141 5149 -1006 * 10094 47 3 116 chr2 98356111 98357668 -152330186 + SVA Other Other 5 1386 0 7541 32 1 14 chr2 98357668 98357847 -152330007 + L1PA4 LINE L1 5149 5329 -826 7541 32 0 0 chr2 98357847 98358745 -152329109 + L1PA4 LINE L1 5254 6151 -4 7541 32 1 14 chr2 98358745 98358756 -152329098 + L1PA4 LINE L1 5329 6151 -4 490 222 0 0 chr2 98358746 98358890 -152328964 + L1M4 LINE L1 3099 3242 -2904 * 332 234 34 126 chr2 98358924 98359099 -152328755 - L3 LINE CR1 -536 1041 883 277 266 13 0 chr2 98359167 98359246 -152328608 + (TA)n Simple_repeat Simple_repeat 2 81 0 4325 100 30 16 chr2 98359960 98360599 -152327255 + L1PA11 LINE L1 5527 6174 0 22 35 0 0 chr2 98360747 98360776 -152327078 + AT_rich Low_complexity Low_complexity 1 29 0 2171 110 0 3 chr2 98360779 98361070 -152326784 - AluSx SINE Alu -22 290 1 252 229 0 0 chr2 98361180 98361228 -152326626 - MIR SINE MIR -10 252 205 22304 31 1 1 chr2 98361834 98365733 -152322121 - L1PA4 LINE L1 -6 6149 2251 352 294 31 55 chr2 98416187 98416350 -152271504 + MIR SINE MIR 34 192 -70 274 214 54 71 chr2 98417274 98417386 -152270468 + L1MC5 LINE L1 6692 6801 -1160 1573 133 53 53 chr2 98417625 98417925 -152269929 - AluSx SINE Alu -10 302 3 768 198 148 0 chr2 98418425 98418607 -152269247 + MER3 DNA MER1_type 1 209 0 367 270 203 0 chr2 98418745 98418893 -152268961 + MER5B DNA MER1_type 1 178 0 225 264 33 66 chr2 98420359 98420450 -152267404 - MIR SINE MIR -62 146 70 599 302 64 27 chr2 98421065 98421363 -152266491 + L1ME3A LINE L1 5443 5751 -2057 411 186 155 0 chr2 98421463 98421560 -152266294 + MIR SINE MIR 133 244 -18 2087 120 0 0 chr2 98421771 98422062 -152265792 + AluSg SINE Alu 1 291 -19 269 286 12 12 chr2 98422124 98422208 -152265646 - MIR SINE MIR -70 192 109 821 205 51 15 chr2 98422256 98422451 -152265403 - MIR SINE MIR -60 202 1 2032 119 0 3 chr2 98422717 98423020 -152264834 + AluSx SINE Alu 1 302 -10 2050 159 48 3 chr2 98423488 98423859 -152263995 - MLT1B LTR MaLR -2 388 1 324 255 171 71 chr2 98424819 98425200 -152262654 + L2 LINE L2 2086 2504 -810 607 138 0 0 chr2 98425513 98425607 -152262247 - AluJ SINE Alu -6 306 213 366 300 72 39 chr2 98426261 98426441 -152261413 - MIR SINE MIR -74 188 3 2393 43 0 10 chr2 98427103 98427402 -152260452 - AluY SINE Alu -14 297 2 1161 263 57 84 chr2 98428022 98429154 -152258700 - L1MC5 LINE L1 -428 7533 6419 22 35 0 0 chr2 98429670 98429699 -152258155 + AT_rich Low_complexity Low_complexity 1 29 0 1156 192 62 5 chr2 98429839 98430063 -152257791 - AluJb SINE Alu -74 238 2 465 188 89 0 chr2 98430632 98430744 -152257110 + L1ME3A LINE L1 6035 6156 -14 1673 152 0 73 chr2 98431020 98431350 -152256504 + AluJb SINE Alu 1 306 -6 922 129 0 0 chr2 98431620 98431752 -152256102 + AluSq/x SINE Alu 1 132 -180 5030 191 60 62 chr2 98431752 98432233 -152255621 + L1MC4a LINE L1 5979 6459 -1349 2002 106 10 3 chr2 98432233 98432526 -152255328 - AluSx SINE Alu -17 295 1 5030 191 60 62 chr2 98432526 98432875 -152254979 + L1MC4a LINE L1 6459 6807 -1001 567 85 119 42 chr2 98432875 98432993 -152254861 + L1MB5 LINE L1 6048 6174 0 5030 191 60 62 chr2 98432993 98433173 -152254681 + L1MC4a LINE L1 6807 6986 -822 2024 126 3 10 chr2 98433173 98433483 -152254371 + AluSx SINE Alu 1 308 -4 5030 191 60 62 chr2 98433483 98433600 -152254254 + L1MC4a LINE L1 6986 7102 -706 2428 76 44 3 chr2 98433600 98433941 -152253913 + L1PA13 LINE L1 5806 6160 -3 5030 191 60 62 chr2 98433941 98434180 -152253674 + L1MC4a LINE L1 7102 7340 -468 1529 171 10 27 chr2 98434180 98434472 -152253382 + AluJb SINE Alu 5 291 -21 2000 117 0 23 chr2 98434475 98434774 -152253080 + AluSx SINE Alu 1 292 -20 5030 191 60 62 chr2 98434774 98434822 -152253032 + L1MC4a LINE L1 7342 7399 -409 1712 175 29 13 chr2 98434825 98435139 -152252715 + MER2 DNA MER2_type 2 320 -25 1403 224 84 18 chr2 98435151 98435237 -152252617 + L1MC4a LINE L1 7402 7481 -327 2109 108 3 0 chr2 98435237 98435533 -152252321 + AluSx SINE Alu 1 297 -15 1403 224 84 18 chr2 98435533 98435826 -152252028 + L1MC4a LINE L1 7481 7806 -2 205 322 45 51 chr2 98435827 98436004 -152251850 + L2 LINE L2 3120 3295 -18 617 227 64 17 chr2 98436261 98436433 -152251421 + MER104 DNA MER2_type 1 180 0 2306 281 96 56 chr2 98436463 98437491 -152250363 + L1M4b LINE L1 3 1071 -5788 2660 247 64 58 chr2 98437559 98437779 -152250075 + L1M4b LINE L1 1255 1472 -5485 2132 104 3 7 chr2 98437779 98438086 -152249768 - AluSx SINE Alu -6 306 1 2660 247 64 58 chr2 98438086 98438294 -152249560 + L1M4b LINE L1 1472 1677 -5280 2770 168 30 38 chr2 98438294 98438818 -152249036 + MLT2B1 LTR ERVL 1 520 0 2660 247 64 58 chr2 98438818 98440199 -152247655 + L1M4b LINE L1 1677 3109 -3848 2974 135 25 86 chr2 98440208 98440862 -152246992 + L1MB8 LINE L1 5564 6177 -1 188 326 214 0 chr2 98440894 98440983 -152246871 - L2 LINE L2 -2 3311 3204 2514 105 72 5 chr2 98441348 98441721 -152246133 + MER48 LTR ERV1 1 398 0 570 299 136 0 chr2 98441981 98442158 -152245696 + MIR SINE MIR 13 213 -49 21 0 0 0 chr2 98442746 98442767 -152245087 + AT_rich Low_complexity Low_complexity 1 21 0 1015 166 0 0 chr2 98443065 98443234 -152244620 + AluSg/x SINE Alu 133 301 -11 239 235 15 29 chr2 98443454 98443522 -152244332 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 24 32 0 0 chr2 98443826 98443857 -152243997 + AT_rich Low_complexity Low_complexity 1 31 0 281 246 164 35 chr2 98445008 98445193 -152242661 - MIR SINE MIR 0 262 8 25 0 0 0 chr2 98445296 98445321 -152242533 + AT_rich Low_complexity Low_complexity 1 25 0 2085 106 14 3 chr2 98445669 98445962 -152241892 + AluSx SINE Alu 1 296 -16 38 61 0 0 chr2 98447986 98448052 -152239802 + GC_rich Low_complexity Low_complexity 1 66 0 1672 133 0 8 chr2 98448195 98448444 -152239410 - AluSx SINE Alu -65 247 1 357 184 149 0 chr2 98448449 98448536 -152239318 - LTR47A LTR ERVL -92 360 261 315 291 57 57 chr2 98448899 98449057 -152238797 - HAL1b LINE L1 -445 903 746 308 228 0 0 chr2 98449109 98449166 -152238688 - HAL1 LINE L1 -354 2153 2097 1707 152 4 4 chr2 98449881 98450158 -152237696 + AluSq SINE Alu 1 277 -36 2362 181 93 14 chr2 98450906 98451337 -152236517 + MLT2B1 LTR ERVL 1 475 -45 1405 196 156 0 chr2 98451337 98451567 -152236287 - MER7A DNA MER2_type -2692 346 59 1634 127 86 31 chr2 98451567 98451858 -152235996 + AluSg SINE Alu 1 307 -3 1405 196 156 0 chr2 98451858 98451928 -152235926 - MER7A DNA MER2_type -2979 59 1 2362 181 93 14 chr2 98451928 98451978 -152235876 + MLT2B1 LTR ERVL 475 520 0 201 121 0 0 chr2 98452403 98452436 -152235418 + (CA)n Simple_repeat Simple_repeat 2 34 0 274 345 34 8 chr2 98453426 98453545 -152234309 - L2 LINE L2 -5 3267 3146 1902 174 28 3 chr2 98453652 98454008 -152233846 + MLT1A1 LTR MaLR 1 365 0 235 236 264 35 chr2 98454194 98454368 -152233486 + L2 LINE L2 2183 2396 -918 2257 252 68 53 chr2 98454370 98455161 -152232693 + MER21B LTR ERV1 1 803 -60 1722 214 35 18 chr2 98455965 98456362 -152231492 - MER63B DNA MER1_type -32 404 1 193 232 74 74 chr2 98456734 98456829 -152231025 - L2 LINE L2 -6 3266 3172 222 227 15 15 chr2 98457153 98457214 -152230640 - L2 LINE L2 -318 2954 2894 490 236 223 0 chr2 98457214 98457362 -152230492 - MER5A DNA MER1_type 0 189 9 599 256 84 59 chr2 98457487 98457725 -152230129 - L2 LINE L2 -526 2788 2545 1407 68 0 0 chr2 98457736 98457912 -152229942 - AluY SINE Alu -11 300 125 336 136 0 0 chr2 98457912 98457956 -152229898 + (TG)n Simple_repeat Simple_repeat 2 45 0 35 0 0 0 chr2 98458089 98458124 -152229730 + GC_rich Low_complexity Low_complexity 1 35 0 367 137 82 0 chr2 98458928 98459001 -152228853 - MIR SINE MIR -110 152 74 2431 104 22 14 chr2 98459511 98459866 -152227988 + THE1B LTR MaLR 7 364 0 409 271 0 86 chr2 98460193 98460333 -152227521 - MIR SINE MIR -111 151 24 1642 141 27 20 chr2 98460421 98460700 -152227154 + AluJo SINE Alu 1 284 -28 414 0 0 0 chr2 98460700 98460746 -152227108 + (TC)n Simple_repeat Simple_repeat 1 46 0 1642 141 27 20 chr2 98460746 98460765 -152227089 + AluJo SINE Alu 284 301 -11 2140 101 7 3 chr2 98460765 98461060 -152226794 + AluSq SINE Alu 1 297 -16 203 143 119 0 chr2 98461969 98462011 -152225843 - L2 LINE L2 -211 3061 3015 2121 96 4 0 chr2 98462302 98462657 -152225197 - AluSp SINE Alu 0 358 3 1838 163 3 3 chr2 98462993 98463294 -152224560 - AluJb SINE Alu -10 302 2 22 35 0 0 chr2 98463294 98463323 -152224531 + AT_rich Low_complexity Low_complexity 1 29 0 1910 133 7 0 chr2 98464139 98464433 -152223421 + AluSq SINE Alu 1 296 -17 198 258 126 47 chr2 98464759 98464949 -152222905 + L2 LINE L2 2850 3054 -218 193 354 171 0 chr2 98465200 98465282 -152222572 + L2 LINE L2 3121 3216 -56 1991 134 3 0 chr2 98465760 98466051 -152221803 + AluSx SINE Alu 1 292 -20 1691 181 16 13 chr2 98466540 98466849 -152221005 - AluJb SINE Alu -2 310 1 2567 29 7 3 chr2 98469179 98469488 -152218366 + AluY SINE Alu 1 310 -1 200 371 29 9 chr2 98469979 98470084 -152217770 - L2 LINE L2 -1357 1957 1851 1679 165 3 31 chr2 98470184 98470505 -152217349 + AluJo SINE Alu 1 312 0 894 257 24 5 chr2 98470698 98470908 -152216946 - MIR SINE MIR -34 228 15 1748 155 3 7 chr2 98470950 98471240 -152216614 + AluJo SINE Alu 1 289 -23 260 366 35 21 chr2 98471402 98471544 -152216310 - MIR3 SINE MIR -21 187 44 1676 138 25 11 chr2 98473084 98473359 -152214495 - AluJo SINE Alu -33 279 1 3016 120 0 18 chr2 98473441 98473883 -152213971 - Tigger3(Golem) DNA MER2_type -1 3028 2595 1536 129 0 4 chr2 98473883 98474116 -152213738 + AluSx SINE Alu 1 232 -80 1572 126 7 33 chr2 98474683 98474953 -152212901 - AluJo SINE Alu -45 267 5 821 190 108 13 chr2 98476060 98476332 -152211522 + MLT1A1 LTR MaLR 1 347 -18 1408 245 108 65 chr2 98476381 98477133 -152210721 + LTR1B LTR ERV1 43 826 0 894 243 107 70 chr2 98477239 98477259 -152210595 + MLT1J LTR MaLR 2 20 -491 2979 137 139 2 chr2 98477259 98477806 -152210048 + LTR29 LTR ERV1 1 622 0 894 243 107 70 chr2 98477806 98478188 -152209666 + MLT1J LTR MaLR 20 419 -92 583 231 16 0 chr2 98478226 98478347 -152209507 - MER5B DNA MER1_type -32 146 24 20104 152 21 11 chr2 98478347 98478884 -152208970 + LTR29-int LTR ERV1 303 833 -6923 2710 94 8 3 chr2 98478884 98479244 -152208610 - THE1B LTR MaLR -2 362 1 20104 152 21 11 chr2 98479244 98482862 -152204992 + LTR29-int LTR ERV1 833 4538 -3218 1766 98 4 0 chr2 98482868 98483103 -152204751 - AluSx SINE Alu -76 236 1 694 252 112 68 chr2 98484740 98485094 -152202760 + L1ME4a LINE L1 5526 5916 -205 1860 151 0 3 chr2 98485094 98485386 -152202468 + AluJo SINE Alu 1 291 -21 694 252 112 68 chr2 98485386 98485602 -152202252 + L1ME4a LINE L1 5916 6121 0 320 211 21 74 chr2 98486568 98486663 -152201191 - MIR SINE MIR -111 151 62 2076 115 3 3 chr2 98486688 98487000 -152200854 - AluSq SINE Alu 0 313 2 1167 195 21 14 chr2 98487000 98487282 -152200572 + MER33 DNA MER1_type 37 320 -4 524 261 40 17 chr2 98488243 98488419 -152199435 - Charlie8 DNA MER1_type -2152 265 86 1539 182 7 10 chr2 98489252 98489560 -152198294 + AluJo SINE Alu 1 307 -5 2393 153 36 16 chr2 98489604 98490180 -152197674 - L1MA8 LINE L1 -4 6287 5656 1238 193 0 48 chr2 98490201 98490450 -152197404 - AluJb SINE Alu -26 286 50 460 214 0 0 chr2 98490469 98490553 -152197301 - AluJ/FLAM SINE Alu -224 88 5 771 92 197 7 chr2 98490555 98490697 -152197157 - L1M2 LINE L1 -624 5676 5508 2119 109 3 0 chr2 98490894 98491188 -152196666 + AluSq SINE Alu 1 295 -18 1740 181 0 0 chr2 98491199 98491491 -152196363 + AluJb SINE Alu 5 296 -16 1946 121 0 0 chr2 98491561 98491842 -152196012 + AluSx SINE Alu 21 301 -11 219 178 0 44 chr2 98491852 98491897 -152195957 - L2 LINE L2 -8 3264 3222 1346 180 25 35 chr2 98491941 98492257 -152195597 + L1MB8 LINE L1 5856 6168 -10 214 294 29 49 chr2 98492519 98492621 -152195233 + MIR SINE MIR 10 109 -153 2047 85 0 7 chr2 98492621 98492893 -152194961 - AluSq SINE Alu -13 300 31 1304 133 0 0 chr2 98492993 98493181 -152194673 - AluSq SINE Alu -97 216 29 318 225 106 78 chr2 98493188 98493330 -152194524 + HAL1 LINE L1 2253 2398 -109 794 200 98 56 chr2 98493384 98493599 -152194255 + MER58A DNA MER1_type 1 224 0 2539 218 138 87 chr2 98493832 98494382 -152193472 + L1MCa LINE L1 798 1319 -5107 1094 104 0 0 chr2 98494382 98494526 -152193328 + U4 snRNA snRNA 1 144 -1 2539 218 138 87 chr2 98494526 98494966 -152192888 + L1MCa LINE L1 1319 1735 -4691 2081 81 0 48 chr2 98494966 98495291 -152192563 + AluY SINE Alu 1 311 0 2539 218 138 87 chr2 98495291 98495731 -152192123 + L1MCa LINE L1 1735 2302 -4124 889 199 76 0 chr2 98495732 98495943 -152191911 + AluJo SINE Alu 85 311 -1 805 194 100 1 chr2 98495943 98496172 -152191682 + L1MCa LINE L1 2324 2607 -3890 835 154 0 22 chr2 98496172 98496308 -152191546 + AluSq/x SINE Alu 1 133 -180 1671 224 46 20 chr2 98496313 98496773 -152191081 + L1MCa LINE L1 2552 3023 -3403 235 229 12 121 chr2 98496966 98497049 -152190805 - L2 LINE L2 0 3272 3199 2049 128 10 0 chr2 98497211 98497516 -152190338 - AluSg SINE Alu 0 310 3 185 195 24 0 chr2 98497583 98497624 -152190230 - L3 LINE CR1 -6 1571 1530 2125 162 39 0 chr2 98497693 98498052 -152189802 - MLT1B LTR MaLR -14 376 4 308 334 133 34 chr2 98499417 98499800 -152188054 - L3 LINE CR1 -38 1539 1119 257 271 17 0 chr2 98499823 98499882 -152187972 - MLT1J2 LTR MaLR -291 159 100 1641 255 77 16 chr2 98500169 98500686 -152187168 - MLT1F1 LTR MaLR -10 557 9 380 252 75 147 chr2 98501977 98502950 -152184904 + L2 LINE L2 1621 2506 -808 2002 118 0 39 chr2 98502950 98503256 -152184598 - AluSx SINE Alu -18 294 1 380 252 75 147 chr2 98503256 98503383 -152184471 + L2 LINE L2 2506 2641 -673 221 273 124 84 chr2 98503352 98503627 -152184227 + L2 LINE L2 3028 3313 0 * 1751 99 4 8 chr2 98503831 98504074 -152183780 - AluSq SINE Alu -16 297 56 1756 141 30 0 chr2 98504105 98504402 -152183452 + AluJo SINE Alu 1 306 -6 503 231 106 19 chr2 98504447 98504607 -152183247 + MIR SINE MIR 69 242 -20 476 158 53 44 chr2 98506899 98507013 -152180841 + L1MB2 LINE L1 6054 6168 -3 342 0 0 0 chr2 98507013 98507051 -152180803 + (TA)n Simple_repeat Simple_repeat 2 39 0 2193 98 0 3 chr2 98507051 98507348 -152180506 - AluSx SINE Alu -16 296 1 1313 219 22 66 chr2 98507359 98507650 -152180204 + L1MB7 LINE L1 5825 6098 -86 1175 191 4 60 chr2 98507650 98507901 -152179953 + MER8 DNA MER2_type 1 237 -2 1313 219 22 66 chr2 98507901 98507974 -152179880 + L1MB7 LINE L1 6098 6173 -11 1661 157 11 4 chr2 98510034 98510308 -152177546 + AluSq SINE Alu 1 276 -37 1056 59 0 0 chr2 98510310 98510446 -152177408 + AluY SINE Alu 176 311 0 359 286 16 0 chr2 98510502 98510628 -152177226 + L1ME4a LINE L1 5994 6121 0 1622 163 29 0 chr2 98510650 98510956 -152176898 - AluJb SINE Alu 0 314 1 191 286 14 29 chr2 98512113 98512183 -152175671 - L2 LINE L2 -81 3232 3164 249 264 56 72 chr2 98512403 98512528 -152175326 - L2 LINE L2 -608 2706 2584 189 278 0 0 chr2 98513741 98513795 -152174059 + MIR SINE MIR 161 214 -48 831 144 80 91 chr2 98514923 98514971 -152172883 - AluJo SINE Alu -127 185 138 2440 76 0 3 chr2 98514971 98515272 -152172582 - AluY SINE Alu -11 300 1 831 144 80 91 chr2 98515272 98515410 -152172444 - AluJo SINE Alu -174 138 1 218 241 0 76 chr2 98516279 98516294 -152171560 - L2 LINE L2 -6 3307 3292 3116 214 38 9 chr2 98516294 98516928 -152170926 - MER82 DNA MER2_type -1 652 1 218 241 0 76 chr2 98516928 98516991 -152170863 - L2 LINE L2 -21 3292 3235 557 226 137 0 chr2 98517109 98517255 -152170599 + L1ME3A LINE L1 6003 6168 -2 260 339 105 0 chr2 98518409 98518533 -152169321 - MIR3 SINE MIR -18 190 54 353 319 21 24 chr2 98519024 98519194 -152168660 - MIR3 SINE MIR -54 154 32 805 164 72 58 chr2 98519304 98519511 -152168343 - MER20 DNA MER1_type -4 215 6 2400 62 7 0 chr2 98520356 98520646 -152167208 - AluY SINE Alu -17 294 3 28 29 0 0 chr2 98521467 98521502 -152166352 + AT_rich Low_complexity Low_complexity 1 35 0 234 307 80 0 chr2 98522238 98522326 -152165528 + L1ME4a LINE L1 5970 6064 -57 315 176 198 22 chr2 98522880 98522971 -152164883 - Cheshire DNA MER1_type -4 2416 2310 9979 194 51 30 chr2 98523071 98523773 -152164081 - Cheshire DNA MER1_type -158 2262 1576 2171 134 0 0 chr2 98523773 98524072 -152163782 - AluSx SINE Alu -11 301 3 9979 194 51 30 chr2 98524072 98525581 -152162273 - Cheshire DNA MER1_type -844 1576 5 417 265 4 4 chr2 98526005 98526125 -152161729 + L1MC/D LINE L1 5692 5811 -360 2094 120 0 7 chr2 98526160 98526460 -152161394 + AluSx SINE Alu 1 298 -14 271 297 151 9 chr2 98526543 98526775 -152161079 + L1ME3 LINE L1 5683 5947 -215 29 0 0 0 chr2 98526971 98527000 -152160854 + AT_rich Low_complexity Low_complexity 1 29 0 467 209 9 9 chr2 98527603 98527713 -152160141 - L1M4b LINE L1 -5788 1071 962 4374 115 47 47 chr2 98527727 98528241 -152159613 + LTR1 LTR ERV1 12 530 -255 1893 101 30 0 chr2 98528241 98528539 -152159315 + AluSg SINE Alu 6 311 0 4374 115 47 47 chr2 98528539 98528796 -152159058 + LTR1 LTR ERV1 529 785 0 2832 224 113 36 chr2 98528802 98529158 -152158696 - L1M4b LINE L1 -5915 944 617 186 43 0 0 chr2 98529158 98529181 -152158673 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1855 135 0 19 chr2 98529189 98529456 -152158398 - AluSg SINE Alu -48 262 1 2832 224 113 36 chr2 98529456 98529967 -152157887 - L1M4b LINE L1 -6248 611 1 217 250 120 43 chr2 98530522 98530614 -152157240 - L2 LINE L2 -19 3253 3155 2095 97 14 0 chr2 98532110 98532429 -152155425 + AluSc SINE Alu 1 323 0 1636 126 5 0 chr2 98532468 98532691 -152155163 - AluSx SINE Alu -88 224 1 1734 169 3 23 chr2 98533426 98533765 -152154089 + AluJb SINE Alu 1 312 0 434 303 52 7 chr2 98534056 98534211 -152153643 + MIR SINE MIR 15 176 -86 614 217 141 0 chr2 98534306 98534490 -152153364 + L1MD1 LINE L1 6013 6222 -20 430 281 22 27 chr2 98534773 98534958 -152152896 - L1ME4a LINE L1 -217 5904 5721 348 299 68 27 chr2 98535079 98535226 -152152628 + MARNA DNA Mariner 114 266 -320 2035 127 13 7 chr2 98535399 98535699 -152152155 + AluSx SINE Alu 1 302 -10 2125 121 20 0 chr2 98536723 98537021 -152150833 + AluSx SINE Alu 1 304 -8 28 29 0 0 chr2 98537265 98537300 -152150554 + AT_rich Low_complexity Low_complexity 1 35 0 1050 111 0 0 chr2 98537634 98537769 -152150085 + AluSq/x SINE Alu 1 135 -177 2377 52 0 64 chr2 98537769 98538096 -152149758 + AluY SINE Alu 1 306 -5 2044 123 3 13 chr2 98538109 98538411 -152149443 + AluSc SINE Alu 1 299 -10 237 261 0 31 chr2 98538544 98538609 -152149245 + GA-rich Low_complexity Low_complexity 5 67 0 818 141 16 0 chr2 98539591 98539719 -152148135 - FLAM_C SINE Alu -13 130 1 2168 115 0 0 chr2 98541034 98541329 -152146525 - AluSq SINE Alu -18 295 1 583 232 82 11 chr2 98542567 98542787 -152145067 + L1MC5 LINE L1 6559 6796 -1018 1266 167 0 14 chr2 98542817 98543027 -152144827 + AluJo SINE Alu 1 207 -105 376 321 0 13 chr2 98543031 98543190 -152144664 + L1MC4 LINE L1 6914 7070 -972 649 184 0 0 chr2 98543196 98543305 -152144549 - L1PA16 LINE L1 -28 6138 6030 510 209 75 80 chr2 98543342 98543581 -152144273 + L1MC5 LINE L1 6991 7228 -733 2337 99 0 13 chr2 98543702 98544014 -152143840 - AluSx SINE Alu -4 308 1 2056 128 7 3 chr2 98544612 98544910 -152142944 + AluSx SINE Alu 1 299 -13 1062 161 18 63 chr2 98544910 98545133 -152142721 + AluJo SINE Alu 86 298 -14 1513 186 10 17 chr2 98545153 98545443 -152142411 + AluJo SINE Alu 10 297 -15 309 307 104 16 chr2 98545473 98545665 -152142189 + L1ME4a LINE L1 5725 5933 -188 354 273 103 34 chr2 98545769 98545939 -152141915 + L1M3de LINE L1 613 1052 -5251 10136 220 57 51 chr2 98546132 98547064 -152140790 + L1M3de LINE L1 777 1702 -4680 2250 105 10 0 chr2 98547064 98547368 -152140486 + AluSx SINE Alu 1 307 -5 10136 220 57 51 chr2 98547368 98547388 -152140466 + L1M3de LINE L1 1702 1720 -4662 695 137 0 0 chr2 98547388 98547490 -152140364 + AluSg/x SINE Alu 209 310 0 10136 220 57 51 chr2 98547490 98548723 -152139131 + L1M3de LINE L1 1720 2944 -3438 2598 46 0 3 chr2 98548723 98549026 -152138828 - AluY SINE Alu -9 302 1 1570 161 35 35 chr2 98549031 98549317 -152138537 - AluJb SINE Alu -22 290 5 10136 220 57 51 chr2 98549317 98551302 -152136552 + L1M3de LINE L1 2947 4983 -1399 198 71 0 0 chr2 98552029 98552057 -152135797 + (CA)n Simple_repeat Simple_repeat 2 29 0 1140 193 33 5 chr2 98553325 98553537 -152134317 + MER20 DNA MER1_type 1 218 -1 210 365 115 0 chr2 98554999 98555103 -152132751 + MIR SINE MIR 32 147 -61 245 174 43 0 chr2 98555332 98555378 -152132476 - L2 LINE L2 0 3272 3225 2238 116 65 37 chr2 98555885 98556239 -152131615 + THE1B LTR MaLR 1 364 0 5315 161 42 4 chr2 98556442 98556788 -152131066 + L1M2 LINE L1 4304 4635 -1634 531 45 0 0 chr2 98556788 98556854 -152131000 + (CA)n Simple_repeat Simple_repeat 1 66 0 5315 161 42 4 chr2 98556854 98557685 -152130169 + L1M2 LINE L1 4635 5523 -746 210 333 88 50 chr2 98557749 98557989 -152129865 - L2 LINE L2 -56 3257 3009 399 298 217 0 chr2 98558128 98558289 -152129565 + L2 LINE L2 2527 2722 -592 1717 197 84 12 chr2 98558289 98558695 -152129159 + L1MD3 LINE L1 7552 7986 -9 193 250 0 0 chr2 98558876 98558920 -152128934 + L3b LINE CR1 1531 1574 -9 21 36 0 0 chr2 98559579 98559607 -152128247 + AT_rich Low_complexity Low_complexity 1 28 0 1517 234 76 10 chr2 98559928 98560321 -152127533 + L1MC4a LINE L1 7341 7759 -49 1890 147 23 13 chr2 98560321 98560621 -152127233 + AluSx SINE Alu 1 303 -9 203 283 19 57 chr2 98560628 98560734 -152127120 - MIR3 SINE MIR -26 182 81 612 303 233 20 chr2 98560827 98561532 -152126322 - L2 LINE L2 -18 3295 2426 2120 128 0 0 chr2 98561678 98561974 -152125880 + AluJb SINE Alu 1 296 -16 2656 82 48 22 chr2 98562183 98562538 -152125316 + THE1B LTR MaLR 1 364 0 12496 83 13 8 chr2 98562538 98562959 -152124895 + THE1B-int LTR MaLR 1 419 -1161 2226 88 7 0 chr2 98562959 98563284 -152124570 - AluSq SINE Alu 0 327 1 12496 83 13 8 chr2 98563284 98564434 -152123420 + THE1B-int LTR MaLR 419 1580 0 2473 86 50 36 chr2 98564434 98564793 -152123061 + THE1B LTR MaLR 1 364 0 783 275 97 58 chr2 98564985 98565345 -152122509 + MLT1I LTR MaLR 36 409 0 1338 304 54 64 chr2 98565959 98566903 -152120951 + L2 LINE L2 2043 2964 -308 2037 196 59 30 chr2 98566903 98567394 -152120460 + MLT1D LTR MaLR 1 505 0 1338 304 54 64 chr2 98567394 98567676 -152120178 + L2 LINE L2 2964 3247 -25 256 304 52 30 chr2 98567795 98567930 -152119924 - HAL1 LINE L1 -1160 1347 1210 201 222 206 0 chr2 98569182 98569245 -152118609 + L2 LINE L2 3189 3264 -8 508 157 22 0 chr2 98569643 98569732 -152118122 + MER51A LTR ERV1 463 553 -81 1739 147 16 39 chr2 98570812 98571119 -152116735 - AluJb SINE Alu -12 300 1 292 215 82 115 chr2 98571779 98572049 -152115805 + L1ME4a LINE L1 5629 5889 -232 2026 142 0 3 chr2 98572722 98573018 -152114836 - AluSx SINE Alu -17 295 1 198 0 0 0 chr2 98573067 98573089 -152114765 + (T)n Simple_repeat Simple_repeat 1 22 0 2400 83 3 3 chr2 98573214 98573516 -152114338 + AluY SINE Alu 1 302 -9 36 23 0 0 chr2 98573516 98573559 -152114295 + AT_rich Low_complexity Low_complexity 1 43 0 26 50 0 0 chr2 98574144 98574184 -152113670 + AT_rich Low_complexity Low_complexity 1 40 0 1844 132 7 56 chr2 98574296 98574390 -152113464 + AluJo SINE Alu 1 98 -214 2750 36 0 0 chr2 98574390 98574695 -152113159 + AluY SINE Alu 1 305 -6 1844 132 7 56 chr2 98574695 98574903 -152112951 + AluJo SINE Alu 98 288 -24 2272 109 0 10 chr2 98575306 98575609 -152112245 - AluSx SINE Alu -12 300 1 2549 62 3 0 chr2 98576237 98576546 -152111308 - AluY SINE Alu -1 310 1 4085 208 82 32 chr2 98576878 98576939 -152110915 + L1MC4 LINE L1 6768 6825 -1217 753 159 24 0 chr2 98576939 98577065 -152110789 + FLAM_C SINE Alu 1 129 -4 4085 208 82 32 chr2 98577065 98577406 -152110448 + L1MC4 LINE L1 6825 7148 -894 2474 82 3 0 chr2 98577406 98577712 -152110142 + AluSp SINE Alu 1 307 -6 4085 208 82 32 chr2 98577712 98578070 -152109784 + L1MC4 LINE L1 7148 7487 -555 2457 58 3 10 chr2 98578070 98578381 -152109473 + AluY SINE Alu 1 309 -2 4085 208 82 32 chr2 98578381 98578804 -152109050 + L1MC4 LINE L1 7487 8012 -30 370 133 53 67 chr2 98579858 98579933 -152107921 + MER116 DNA Mariner 3 76 -4 27 62 0 0 chr2 98580139 98580187 -152107667 + AT_rich Low_complexity Low_complexity 1 48 0 1788 165 7 13 chr2 98580220 98580523 -152107331 + AluJo SINE Alu 1 301 -11 718 207 55 6 chr2 98580971 98581135 -152106719 - MER5A DNA MER1_type 0 189 18 23 33 0 0 chr2 98581517 98581547 -152106307 + AT_rich Low_complexity Low_complexity 1 30 0 1902 114 4 25 chr2 98581795 98582075 -152105779 - AluSx SINE Alu -1 311 38 942 200 26 48 chr2 98583362 98583592 -152104262 + Looper DNA T2_type 1 225 -1333 1941 268 55 43 chr2 98583592 98584178 -152103676 + MLT1E LTR MaLR 1 593 0 * 2578 182 44 20 chr2 98584178 98584716 -152103138 + Looper DNA T2_type 223 773 -785 2838 228 79 16 chr2 98584716 98584807 -152103047 + L1MDa LINE L1 19 103 -6437 1900 154 3 16 chr2 98584807 98585119 -152102735 + AluJb SINE Alu 1 308 -4 2838 228 79 16 chr2 98585119 98586279 -152101575 + L1MDa LINE L1 103 1522 -5018 1726 147 54 0 chr2 98586437 98586716 -152101138 + AluJb SINE Alu 1 294 -18 6805 119 52 25 chr2 98586716 98587372 -152100482 + Tigger3b DNA MER2_type 67 768 -2260 1835 155 3 34 chr2 98587372 98587669 -152100185 - AluJb SINE Alu -24 288 1 6805 119 52 25 chr2 98587669 98588146 -152099708 + Tigger3b DNA MER2_type 768 1231 0 2823 184 65 11 chr2 98588146 98588772 -152099082 + L1MDa LINE L1 1564 2223 -4317 789 211 147 11 chr2 98588774 98588964 -152098890 + AluJo SINE Alu 86 301 -11 1326 183 41 13 chr2 98588970 98589287 -152098567 + L1MDa LINE L1 2234 2559 -3981 263 93 23 0 chr2 98589314 98589357 -152098497 + (CCCCAG)n Simple_repeat Simple_repeat 1 44 0 1997 141 7 0 chr2 98589806 98590090 -152097764 + AluSx SINE Alu 1 286 -26 2118 118 3 3 chr2 98590297 98590601 -152097253 - AluSx SINE Alu -8 304 1 2044 137 0 13 chr2 98591140 98591447 -152096407 - AluSx SINE Alu -9 303 1 240 205 154 0 chr2 98592370 98592448 -152095406 + L1MDa LINE L1 2543 2632 -3908 1274 198 61 133 chr2 98592453 98592948 -152094906 + L1MD2 LINE L1 5784 6242 0 1592 220 79 16 chr2 98592959 98593391 -152094463 + Looper DNA T2_type 761 1219 -339 2008 136 0 27 chr2 98593391 98593692 -152094162 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr2 98593692 98593714 -152094140 + AT_rich Low_complexity Low_complexity 1 22 0 2201 184 155 26 chr2 98594254 98594750 -152093104 - MER68 LTR ERV1 -2 560 1 2272 193 60 32 chr2 98595068 98595566 -152092288 + LTR64 LTR ERVK 1 512 -1 186 49 49 24 chr2 98595566 98595607 -152092247 + (TA)n Simple_repeat Simple_repeat 1 42 0 186 43 0 0 chr2 98595686 98595709 -152092145 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 1142 153 80 40 chr2 98595715 98595873 -152091981 - Charlie1 DNA MER1_type -20 2741 2591 2402 90 0 0 chr2 98595873 98596172 -152091682 + AluSq SINE Alu 1 299 -14 1142 153 80 40 chr2 98596172 98596314 -152091540 - Charlie1 DNA MER1_type -170 2591 2429 473 221 173 0 chr2 98596322 98596426 -152091428 - Charlie1 DNA MER1_type -2638 123 2 186 231 0 0 chr2 98597164 98597203 -152090651 + MER5B DNA MER1_type 4 42 -136 441 318 56 21 chr2 98597229 98597462 -152090392 + L1M4b LINE L1 6 246 -6613 1347 239 90 60 chr2 98598103 98598757 -152089097 + L1M4b LINE L1 1228 1901 -4954 698 284 65 66 chr2 98598816 98599436 -152088418 + L2 LINE L2 2684 3313 0 868 168 0 0 chr2 98599535 98599666 -152088188 + AluJo SINE Alu 9 139 -173 289 93 0 93 chr2 98599670 98599724 -152088130 + AluJo SINE Alu 87 135 -167 1349 148 25 111 chr2 98599724 98600048 -152087806 + AluJo SINE Alu 1 296 -16 503 264 39 8 chr2 98600693 98600822 -152087032 - MER94 DNA DNA -1 133 1 2913 13 3 0 chr2 98600924 98601239 -152086615 + AluYb8 SINE Alu 1 316 -2 216 0 0 0 chr2 98601632 98601656 -152086198 + (TTTTTA)n Simple_repeat Simple_repeat 6 29 0 1804 94 4 4 chr2 98601656 98601891 -152085963 - AluSc SINE Alu -74 235 1 201 235 12 35 chr2 98601963 98602048 -152085806 + (CATATA)n Simple_repeat Simple_repeat 4 86 0 1899 140 11 0 chr2 98602196 98602475 -152085379 + AluSx SINE Alu 1 282 -30 22 0 0 0 chr2 98602548 98602570 -152085284 + AT_rich Low_complexity Low_complexity 1 22 0 923 78 16 0 chr2 98603400 98603528 -152084326 - FLAM_C SINE Alu -3 130 1 2225 120 0 13 chr2 98604497 98604813 -152083041 + AluSx SINE Alu 1 312 0 1660 140 44 7 chr2 98605456 98605727 -152082127 - AluJo SINE Alu -31 281 1 1366 69 134 0 chr2 98605745 98605947 -152081907 + MER30 DNA MER1_type 2 230 0 23 68 0 0 chr2 98606979 98607023 -152080831 + GC_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr2 98607040 98607069 -152080785 + GC_rich Low_complexity Low_complexity 1 29 0 211 321 67 8 chr2 98608113 98608247 -152079607 - MIR SINE MIR -59 203 62 198 233 0 0 chr2 98610553 98610613 -152077241 + (TTCA)n Simple_repeat Simple_repeat 1 60 0 186 221 29 44 chr2 98611017 98611085 -152076769 - L2 LINE L2 -568 2746 2680 2059 115 38 0 chr2 98611552 98611839 -152076015 - AluSg SINE Alu -12 298 1 600 283 55 58 chr2 98618500 98618861 -152068993 + L1MC4a LINE L1 5671 6030 -1778 1046 160 6 0 chr2 98619422 98619597 -152068257 - FRAM SINE Alu 0 176 1 576 252 0 0 chr2 98620103 98620218 -152067636 - MER3 DNA MER1_type -94 115 1 347 160 96 64 chr2 98620787 98620881 -152066973 + MLT1E2 LTR MaLR 1 97 -557 2061 207 76 9 chr2 98620919 98621378 -152066476 + MLT1E2 LTR MaLR 137 626 0 24 0 0 0 chr2 98624326 98624350 -152063504 + AT_rich Low_complexity Low_complexity 1 24 0 649 226 137 0 chr2 98625688 98625856 -152061998 + MIR SINE MIR 58 248 -14 1708 285 133 31 chr2 98626300 98627344 -152060510 - L2 LINE L2 -8 3305 2073 1831 123 84 34 chr2 98628768 98629125 -152058729 + THE1C LTR MaLR 1 375 0 812 158 12 55 chr2 98629381 98629545 -152058309 + Tigger1 DNA MER2_type 1 157 -2261 * 1138 142 38 9 chr2 98629534 98629745 -152058109 + Tigger1 DNA MER2_type 2202 2418 0 2380 94 3 0 chr2 98629760 98630058 -152057796 + AluSx SINE Alu 1 299 -13 803 39 39 10 chr2 98630791 98630893 -152056961 + MER4A LTR ERV1 9 113 -551 * 2612 100 44 89 chr2 98630886 98631337 -152056517 + MER4A LTR ERV1 232 662 -2 248 273 182 0 chr2 98631722 98631810 -152056044 - L2 LINE L2 -44 3228 3125 261 203 136 0 chr2 98633016 98633075 -152054779 - MIR SINE MIR -188 74 8 722 212 43 22 chr2 98633422 98633606 -152054248 + MER53 DNA DNA 2 189 0 21 36 0 0 chr2 98633688 98633716 -152054138 + GC_rich Low_complexity Low_complexity 1 28 0 185 400 53 0 chr2 98634406 98634501 -152053353 - L2 LINE L2 -20 3252 3153 235 196 65 0 chr2 98635083 98635129 -152052725 - MIR3 SINE MIR -41 167 119 224 343 65 9 chr2 98635213 98635321 -152052533 - L2 LINE L2 -25 3247 3134 326 287 52 52 chr2 98635407 98635581 -152052273 - L2 LINE L2 -185 3087 2914 677 230 113 81 chr2 98636854 98637298 -152050556 - MLT1J LTR MaLR 0 511 9 2383 93 3 6 chr2 98638961 98639272 -152048582 - AluSx SINE Alu -2 310 1 2005 128 28 3 chr2 98639803 98640093 -152047761 - AluSg SINE Alu -13 297 1 21 0 0 0 chr2 98640348 98640369 -152047485 + AT_rich Low_complexity Low_complexity 1 21 0 1812 144 14 71 chr2 98640480 98640834 -152047020 - MER1B DNA MER1_type -1 336 3 297 0 0 0 chr2 98641212 98641245 -152046609 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1968 112 0 4 chr2 98641245 98641505 -152046349 - AluSg SINE Alu -51 259 1 367 285 103 56 chr2 98642257 98642559 -152045295 - MLT1K LTR MaLR -115 473 158 1362 169 95 16 chr2 98643094 98643585 -152044269 - L1MB7 LINE L1 -7 6177 5726 1849 115 66 10 chr2 98643585 98643873 -152043981 - AluJb SINE Alu -8 304 1 1362 169 95 16 chr2 98643873 98644449 -152043405 - L1MB7 LINE L1 -458 5726 4980 3582 178 92 43 chr2 98644479 98646219 -152041635 - L1MB2 LINE L1 -3 6168 4348 2526 14 0 0 chr2 98646777 98647060 -152040794 - L1PA2 LINE L1 -6 6149 5867 5430 18 8 4 chr2 98647060 98648073 -152039781 + L1PA2 LINE L1 4866 5879 -276 221 315 133 38 chr2 98648814 98649160 -152038694 - L2 LINE L2 -965 2349 1971 257 197 76 0 chr2 98651028 98651094 -152036760 + L1P LINE L1 4973 5043 -1103 727 230 6 0 chr2 98651965 98652130 -152035724 - MIR SINE MIR -91 171 6 21 0 0 0 chr2 98654411 98654432 -152033422 + AT_rich Low_complexity Low_complexity 1 21 0 242 261 0 29 chr2 98660897 98660966 -152026888 + A-rich Low_complexity Low_complexity 1 67 0 737 211 62 0 chr2 98661989 98662150 -152025704 - MER63A DNA MER1_type -39 171 1 261 143 143 26 chr2 98662617 98662694 -152025160 - L1ME4a LINE L1 -11 6110 6025 227 330 43 0 chr2 98663013 98663107 -152024747 + L1MC/D LINE L1 5683 5780 -2028 2102 132 10 3 chr2 98663118 98663421 -152024433 + AluSx SINE Alu 1 305 -7 21 36 0 0 chr2 98665281 98665309 -152022545 + GC_rich Low_complexity Low_complexity 1 28 0 897 195 8 156 chr2 98666247 98666606 -152021248 + MER46C DNA MER2_type 31 336 -2 2499 86 0 0 chr2 98667812 98668113 -152019741 - AluSx SINE Alu -11 301 1 404 369 0 0 chr2 98671179 98671320 -152016534 + MIR SINE MIR 109 249 -13 425 207 156 22 chr2 98671441 98671576 -152016278 + MER5B DNA MER1_type 6 158 -20 200 182 0 0 chr2 98671710 98671743 -152016111 + CT-rich Low_complexity Low_complexity 4 36 0 292 237 113 0 chr2 98672782 98672879 -152014975 + MIR SINE MIR 124 231 -31 228 250 0 0 chr2 98675681 98675729 -152012125 + (CA)n Simple_repeat Simple_repeat 1 48 0 498 330 119 12 chr2 98675846 98676191 -152011663 + L2 LINE L2 2890 3271 -1 426 237 94 12 chr2 98677307 98677500 -152010354 + L1ME LINE L1 5558 5641 -480 189 0 0 0 chr2 98678514 98678535 -152009319 + (A)n Simple_repeat Simple_repeat 1 21 0 311 345 42 24 chr2 98680349 98680517 -152007337 + MIR3 SINE MIR 23 193 -15 1054 242 23 0 chr2 98682323 98682542 -152005312 - MER58A DNA MER1_type 0 224 1 257 314 57 57 chr2 98684086 98684261 -152003593 - MER5B DNA MER1_type -2 176 2 228 170 0 0 chr2 98688878 98688931 -151998923 + (TG)n Simple_repeat Simple_repeat 1 53 0 207 275 163 0 chr2 98689275 98689355 -151998499 + MIR SINE MIR 33 125 -83 1767 191 20 0 chr2 98691219 98691518 -151996336 + AluJo SINE Alu 1 305 -7 211 313 48 12 chr2 98697335 98697418 -151990436 + MER5A DNA MER1_type 4 89 -100 192 152 0 0 chr2 98698404 98698437 -151989417 + (TG)n Simple_repeat Simple_repeat 1 33 0 1811 207 85 28 chr2 98698904 98699322 -151988532 + REP3 LTR ERV 27 480 -82 1801 65 18 5 chr2 98699322 98699539 -151988315 + AluY SINE Alu 74 293 -18 1811 207 85 28 chr2 98699539 98699627 -151988227 + REP3 LTR ERV 480 562 0 264 262 228 9 chr2 98699679 98699912 -151987942 + HAL1 LINE L1 2028 2311 -196 322 343 72 6 chr2 98699916 98700082 -151987772 + HAL1 LINE L1 2331 2507 0 23 54 0 0 chr2 98700146 98700183 -151987671 + AT_rich Low_complexity Low_complexity 1 37 0 275 264 190 12 chr2 98700216 98700379 -151987475 + L2 LINE L2 2874 3065 -248 1818 182 0 10 chr2 98700584 98700891 -151986963 + AluJo SINE Alu 1 304 -8 23 0 0 0 chr2 98701006 98701029 -151986825 + AT_rich Low_complexity Low_complexity 1 23 0 323 225 70 56 chr2 98701029 98701126 -151986728 + L1MC4 LINE L1 7899 8000 -42 2602 54 0 0 chr2 98701126 98701423 -151986431 - AluY SINE Alu -14 297 1 323 225 70 56 chr2 98701423 98701467 -151986387 + L1MC4 LINE L1 8000 8042 0 1913 174 52 16 chr2 98701594 98701961 -151985893 + MSTD LTR MaLR 17 396 0 2281 121 3 0 chr2 98702237 98702544 -151985310 + AluSx SINE Alu 1 308 -4 187 268 196 9 chr2 98702615 98702727 -151985127 - MIR SINE MIR -119 143 11 256 283 43 11 chr2 98703800 98703892 -151983962 + MIR3 SINE MIR 99 193 -15 494 188 90 62 chr2 98705854 98705998 -151981856 - L2 LINE L2 0 3313 3166 489 241 62 0 chr2 98707912 98708024 -151979830 + MER5A DNA MER1_type 6 124 -65 257 288 41 119 chr2 98708026 98708269 -151979585 + L2 LINE L2 3034 3257 -15 638 172 8 16 chr2 98709629 98709751 -151978103 + Tigger3(Golem) DNA MER2_type 22 142 -2887 * 1324 156 63 0 chr2 98709748 98709985 -151977869 + Tigger3(Golem) DNA MER2_type 2771 3022 -7 409 145 60 0 chr2 98709986 98710069 -151977785 + L1MB3 LINE L1 6095 6182 -1 234 261 0 14 chr2 98710189 98710258 -151977596 + GA-rich Low_complexity Low_complexity 3 70 0 403 319 130 6 chr2 98710609 98710948 -151976906 - L1MEd LINE L1 -4642 1754 1374 464 273 130 36 chr2 98711061 98711274 -151976580 - L1M2 LINE L1 -4844 1372 930 1631 191 9 26 chr2 98711297 98711643 -151976211 + MLT1A1 LTR MaLR 26 365 0 515 328 91 28 chr2 98711661 98711914 -151975940 - L1MEd LINE L1 -5300 905 637 1493 172 85 35 chr2 98712649 98712705 -151975149 - L1MB7 LINE L1 -20 6164 6112 2524 62 7 7 chr2 98712705 98713014 -151974840 - AluY SINE Alu -2 309 1 1493 172 85 35 chr2 98713014 98713359 -151974495 - L1MB7 LINE L1 -72 6112 5743 * 7207 203 33 36 chr2 98713340 98713373 -151974481 - L1M4c LINE L1 -4734 1912 1880 2503 43 10 10 chr2 98713373 98713673 -151974181 - AluY SINE Alu -11 300 1 7207 203 33 36 chr2 98713673 98715396 -151972458 - L1M4c LINE L1 -4766 1880 162 2789 138 17 5 chr2 98715396 98715817 -151972037 + MSTB LTR MaLR 1 426 0 7207 203 33 36 chr2 98715817 98715963 -151971891 - L1M4c LINE L1 -6484 162 17 1704 217 204 15 chr2 98716088 98716625 -151971229 - L1ME2 LINE L1 -17 6147 5713 185 0 40 0 chr2 98716625 98716650 -151971204 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1704 217 204 15 chr2 98716650 98716956 -151970898 - L1ME2 LINE L1 -451 5713 5466 2100 232 46 52 chr2 98716956 98717585 -151970269 + MLT1E2 LTR MaLR 2 626 0 1704 217 204 15 chr2 98717585 98717673 -151970181 - L1ME2 LINE L1 -698 5466 5022 669 293 33 5 chr2 98718232 98718494 -151969360 + L1MC4a LINE L1 5603 5823 -298 24 32 0 0 chr2 98718682 98718713 -151969141 + AT_rich Low_complexity Low_complexity 1 31 0 2618 64 0 0 chr2 98718775 98719086 -151968768 + AluY SINE Alu 1 311 0 2195 220 89 40 chr2 98719365 98720153 -151967701 - HAL1 LINE L1 -706 1801 968 2403 100 3 0 chr2 98720153 98720463 -151967391 - AluSx SINE Alu -1 311 1 2195 220 89 40 chr2 98720463 98720519 -151967335 - HAL1 LINE L1 -1539 968 916 1589 176 68 14 chr2 98720523 98720819 -151967035 - AluJo SINE Alu 0 312 1 331 314 40 8 chr2 98720927 98721051 -151966803 - MIR SINE MIR -62 146 19 189 349 43 14 chr2 98721217 98721389 -151966465 - MIR SINE MIR -40 222 43 24 53 0 0 chr2 98721686 98721724 -151966130 + AT_rich Low_complexity Low_complexity 1 38 0 237 232 148 10 chr2 98724709 98724825 -151963029 + L1P3 LINE L1 5691 5818 -303 1292 246 195 10 chr2 98724838 98725465 -151962389 + L1ME2 LINE L1 5371 6113 -51 221 246 15 15 chr2 98726984 98727049 -151960805 + (CACCC)n Simple_repeat Simple_repeat 3 67 0 1726 194 19 112 chr2 98727353 98727524 -151960330 - MER21B LTR ERV1 -391 472 287 1767 167 16 29 chr2 98727524 98727835 -151960019 - AluJo SINE Alu -5 307 1 1726 194 19 112 chr2 98727835 98728183 -151959671 - MER21B LTR ERV1 -576 287 1 321 89 0 0 chr2 98728972 98729017 -151958837 + (TGAG)n Simple_repeat Simple_repeat 2 46 0 1675 196 81 16 chr2 98729695 98730067 -151957787 + MSTD LTR MaLR 1 396 0 187 271 119 0 chr2 98730197 98730256 -151957598 + MIR SINE MIR 98 163 -99 243 229 66 0 chr2 98730703 98730764 -151957090 + MIR SINE MIR 84 148 -114 2151 81 4 7 chr2 98731132 98731404 -151956450 + AluSc SINE Alu 22 292 -17 1130 186 165 49 chr2 98731716 98732043 -151955811 + MLT1A1 LTR MaLR 1 365 0 498 266 100 80 chr2 98732133 98732605 -151955249 + L2 LINE L2 2365 3074 -239 2144 106 58 36 chr2 98732932 98733262 -151954592 - MER1B DNA MER1_type 0 337 1 232 282 126 22 chr2 98736008 98736187 -151951667 - MIR SINE MIR -59 203 9 190 379 32 40 chr2 98738791 98738915 -151948939 - L2 LINE L2 -43 3229 3107 2160 88 0 82 chr2 98741125 98741443 -151946411 - AluSx SINE Alu -20 292 1 2792 132 58 13 chr2 98741566 98742030 -151945824 + MER31A LTR ERV1 1 485 0 504 154 67 19 chr2 98742706 98742810 -151945044 + L1MC2 LINE L1 6235 6343 -1 1819 191 48 11 chr2 98743459 98743835 -151944019 - MLT1B LTR MaLR 0 390 1 1959 151 48 31 chr2 98743966 98744324 -151943530 - THE1B LTR MaLR 0 364 1 3155 69 0 2 chr2 98744324 98744731 -151943123 - THE1B-int LTR MaLR 0 1580 1175 1109 146 38 5 chr2 98744731 98744943 -151942911 + L1 LINE L1 5160 5378 -768 * 3135 112 4 4 chr2 98744939 98745402 -151942452 - THE1-int LTR MaLR -416 1164 702 206 279 8 90 chr2 98745534 98745656 -151942198 - MIR SINE MIR -80 128 17 2550 147 25 0 chr2 98745666 98746184 -151941670 - L1M LINE L1 -743 5403 4901 4681 131 71 27 chr2 98746185 98747040 -151940814 + MER4D LTR ERV1 1 893 -10 498 191 0 0 chr2 98747041 98747130 -151940724 - L1 LINE L1 -1238 4908 4820 282 122 20 0 chr2 98747132 98747181 -151940673 + L1 LINE L1 4766 4815 -1331 * 5833 192 90 28 chr2 98747172 98748596 -151939258 - L1M4b LINE L1 -5340 1519 8 1526 150 119 4 chr2 98748794 98749054 -151938800 + AluJb SINE Alu 23 312 0 205 346 9 28 chr2 98749508 98749615 -151938239 + MIR SINE MIR 51 155 -107 334 155 69 0 chr2 98750140 98750198 -151937656 + Tigger5 DNA MER2_type 1 62 -2261 343 228 0 0 chr2 98750208 98750287 -151937567 - Tigger5 DNA MER2_type -3 2320 2242 2024 138 3 0 chr2 98750289 98750572 -151937282 + AluSx SINE Alu 10 293 -19 391 156 39 13 chr2 98750572 98750649 -151937205 + Tigger5 DNA MER2_type 2245 2323 0 381 299 72 40 chr2 98752229 98752480 -151935374 + L2 LINE L2 2374 2632 -682 441 0 0 0 chr2 98753484 98753533 -151934321 + (CA)n Simple_repeat Simple_repeat 2 50 0 1638 140 29 55 chr2 98754156 98754426 -151933428 + L1MC3 LINE L1 6706 6967 -818 2441 163 60 5 chr2 98754426 98754861 -151932993 + MER65C LTR ERV1 3 461 0 1638 140 29 55 chr2 98754861 98754933 -151932921 + L1MC3 LINE L1 6967 7039 -746 860 167 0 0 chr2 98754937 98755069 -151932785 + FLAM_C SINE Alu 1 132 -1 1350 167 48 33 chr2 98755097 98755433 -151932421 + L1MC3 LINE L1 7438 7778 -7 1372 172 0 13 chr2 98759399 98759637 -151928217 - MER46A DNA MER2_type 0 236 2 619 239 0 0 chr2 98760347 98760464 -151927390 - FLAM_C SINE Alu -13 130 14 445 298 40 20 chr2 98762046 98762197 -151925657 + MIR SINE MIR 94 247 -15 368 315 158 0 chr2 98763362 98763508 -151924346 + MER5A DNA MER1_type 13 181 -8 437 341 65 22 chr2 98765211 98765440 -151922414 + MIR SINE MIR 24 262 0 253 361 38 13 chr2 98767277 98767435 -151920419 + L2 LINE L2 2922 3083 -189 425 177 34 40 chr2 98769117 98769368 -151918486 + (CACTC)n Simple_repeat Simple_repeat 1 249 0 281 237 29 35 chr2 98769357 98769530 -151918324 + (CACTG)n Simple_repeat Simple_repeat 3 174 0 * 342 230 22 59 chr2 98769587 98769722 -151918132 + MIR SINE MIR 16 145 -63 200 213 16 0 chr2 98771264 98771325 -151916529 + (CA)n Simple_repeat Simple_repeat 1 62 0 2400 77 0 0 chr2 98771503 98771813 -151916041 + AluSg SINE Alu 1 310 0 498 263 179 0 chr2 98772240 98772419 -151915435 - L2 LINE L2 -2032 1282 1072 2099 103 0 3 chr2 98772637 98772948 -151914906 - AluSp SINE Alu 0 313 1 2292 67 0 13 chr2 98772952 98773252 -151914602 - AluSg1 SINE Alu -13 296 1 333 303 67 55 chr2 98773285 98773450 -151914404 + MER5B DNA MER1_type 6 172 -6 1297 216 4 15 chr2 98773940 98774213 -151913641 + AluJo SINE Alu 11 280 -32 189 0 0 0 chr2 98774213 98774234 -151913620 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 2336 138 23 51 chr2 98775121 98775550 -151912304 + MSTB1 LTR MaLR 14 430 -2 367 262 161 24 chr2 98775852 98776020 -151911834 + MIR SINE MIR 65 255 -7 2156 105 0 0 chr2 98776123 98776442 -151911412 + AluSx SINE Alu 1 319 0 305 208 90 118 chr2 98776836 98776911 -151910943 + MIR SINE MIR 108 179 -83 1339 206 129 43 chr2 98776911 98777376 -151910478 + MLT1D LTR MaLR 1 505 0 305 208 90 118 chr2 98777376 98777444 -151910410 + MIR SINE MIR 179 247 -15 1869 84 0 0 chr2 98779327 98779566 -151908288 + AluSx SINE Alu 1 239 -73 49 0 0 0 chr2 98779588 98779637 -151908217 + AT_rich Low_complexity Low_complexity 1 49 0 1640 171 23 13 chr2 98779648 98779957 -151907897 + AluJb SINE Alu 1 312 0 2125 108 0 0 chr2 98779984 98780302 -151907552 - AluY SINE Alu 0 311 1 303 28 0 0 chr2 98782332 98782368 -151905486 + (CA)n Simple_repeat Simple_repeat 2 37 0 375 205 71 45 chr2 98782692 98782804 -151905050 - L2 LINE L2 0 3313 3199 1159 169 0 24 chr2 98784112 98784325 -151903529 - AluJo SINE Alu -18 294 87 1442 191 3 56 chr2 98784350 98784670 -151903184 + AluJo SINE Alu 1 303 -9 585 174 0 35 chr2 98785057 98785172 -151902682 - FLAM_A SINE Alu -10 132 22 1771 136 7 23 chr2 98785829 98786137 -151901717 + AluJo SINE Alu 1 303 -9 1868 152 3 0 chr2 98787110 98787412 -151900442 - AluJo SINE Alu -9 303 1 229 206 98 49 chr2 98787925 98788027 -151899827 - MIR SINE MIR -36 226 120 1762 99 0 0 chr2 98788353 98788586 -151899268 - AluSx SINE Alu -21 291 59 269 282 127 0 chr2 98789024 98789134 -151898720 + MER112 DNA MER1_type 98 221 -39 1061 168 17 0 chr2 98790017 98790196 -151897658 - MER5A DNA MER1_type -5 184 3 241 276 105 29 chr2 98790391 98790496 -151897358 + MLT1L LTR MaLR 373 485 -130 2005 109 3 26 chr2 98791398 98791701 -151896153 + AluSx SINE Alu 1 296 -16 622 234 41 29 chr2 98791782 98791953 -151895901 - MIR SINE MIR -13 249 77 372 282 86 23 chr2 98792432 98792696 -151895158 + L1ME LINE L1 5276 5553 -611 5139 176 78 41 chr2 98792760 98793469 -151894385 + L1MC4 LINE L1 6712 7393 -649 1316 200 45 17 chr2 98793469 98793759 -151894095 + AluJo SINE Alu 4 301 -1 5139 176 78 41 chr2 98793759 98794094 -151893760 + L1MC4 LINE L1 7393 7714 -328 2053 130 7 0 chr2 98794094 98794395 -151893459 - AluSx SINE Alu -9 303 1 2242 64 0 0 chr2 98794399 98794679 -151893175 - AluY SINE Alu -7 304 25 5139 176 78 41 chr2 98794679 98794907 -151892947 + L1MC4 LINE L1 7716 8038 -4 34 79 0 0 chr2 98797301 98797377 -151890477 + GC_rich Low_complexity Low_complexity 1 76 0 21 36 0 0 chr2 98797391 98797419 -151890435 + GC_rich Low_complexity Low_complexity 1 28 0 518 121 198 17 chr2 98798572 98798688 -151889166 + FRAM SINE Alu 40 176 0 22 56 0 0 chr2 98798720 98798756 -151889098 + AT_rich Low_complexity Low_complexity 1 36 0 493 229 59 0 chr2 98798920 98799038 -151888816 - MER94 DNA DNA -4 130 6 2233 84 7 0 chr2 98799043 98799340 -151888514 - AluSp SINE Alu -13 300 2 31 44 0 0 chr2 98799377 98799422 -151888432 + AT_rich Low_complexity Low_complexity 1 45 0 1394 171 34 118 chr2 98799631 98800139 -151887715 + MER4C LTR ERV1 1 465 0 947 213 6 11 chr2 98800213 98800387 -151887467 + MER5A DNA MER1_type 1 173 -16 1895 197 73 32 chr2 98800436 98800877 -151886977 + LTR2B LTR ERV1 32 490 0 2069 144 18 9 chr2 98800998 98801338 -151886516 - MER2 DNA MER2_type 0 344 2 1706 147 91 0 chr2 98801361 98801647 -151886207 + AluSx SINE Alu 1 312 0 1332 237 16 32 chr2 98801656 98802027 -151885827 + L1M4 LINE L1 241 605 -5937 854 137 16 104 chr2 98802035 98802218 -151885636 + FAM SINE Alu 1 40 -9 3370 255 43 49 chr2 98802235 98804154 -151883700 + L1M4 LINE L1 662 2638 -4006 1460 203 0 11 chr2 98804154 98804430 -151883424 + AluJo SINE Alu 12 284 -28 3370 255 43 49 chr2 98804430 98805246 -151882608 + L1M4 LINE L1 2638 3458 -3186 1607 135 33 28 chr2 98805247 98805583 -151882271 - MER61B LTR ERV1 0 425 1 1889 99 0 50 chr2 98805583 98805836 -151882018 - HUERS-P3b LTR ERV1 0 5217 4978 2200 118 0 6 chr2 98805836 98806150 -151881704 + AluSx SINE Alu 1 312 0 1889 99 0 50 chr2 98806150 98806178 -151881676 - HUERS-P3b LTR ERV1 -239 4978 4950 4358 151 54 36 chr2 98806182 98807143 -151880711 - MER11C LTR ERVK 0 1071 1 23240 93 28 14 chr2 98807146 98808783 -151879071 - HUERS-P3b LTR ERV1 -270 4947 3334 1899 134 19 65 chr2 98808783 98809155 -151878699 + THE1A LTR MaLR 1 355 0 23240 93 28 14 chr2 98809155 98810863 -151876991 - HUERS-P3b LTR ERV1 -1883 3334 1506 3698 115 0 4 chr2 98810863 98811376 -151876478 + MER9 LTR ERVK 1 511 0 23240 93 28 14 chr2 98811376 98811468 -151876386 - HUERS-P3b LTR ERV1 -3711 1506 1417 5230 106 8 58 chr2 98811437 98812326 -151875528 - HUERS-P3b LTR ERV1 -4010 1207 364 * 633 142 45 60 chr2 98812390 98812524 -151875330 - HUERS-P3b LTR ERV1 -5084 133 2 1781 119 0 43 chr2 98812524 98812874 -151874980 - MER61B LTR ERV1 0 425 1 319 224 24 47 chr2 98812874 98812959 -151874895 + L1M4 LINE L1 3456 3538 -3106 842 201 0 0 chr2 98812959 98813128 -151874726 + FRAM SINE Alu 1 168 -8 1617 154 7 11 chr2 98813188 98813474 -151874380 + AluJb SINE Alu 24 308 -4 343 97 16 16 chr2 98813478 98813540 -151874314 + (GGAA)n Simple_repeat Simple_repeat 2 63 0 5087 213 47 77 chr2 98813540 98815058 -151872796 + L1M4 LINE L1 3579 5034 -1610 1833 144 18 0 chr2 98815058 98815368 -151872486 - AluSx SINE Alu 0 315 1 5087 213 47 77 chr2 98815368 98815722 -151872132 + L1M4 LINE L1 5034 5397 -1247 * 5538 220 31 36 chr2 98815721 98816690 -151871164 - L1M4 LINE L1 -748 5896 4924 1819 121 0 59 chr2 98816690 98816996 -151870858 - AluSx SINE Alu -24 288 1 5538 220 31 36 chr2 98816996 98817057 -151870797 - L1M4 LINE L1 -1720 4924 4864 2015 147 3 0 chr2 98817057 98817363 -151870491 - AluSx SINE Alu -5 307 1 5538 220 31 36 chr2 98817363 98817967 -151869887 - L1M4 LINE L1 -1780 4864 4258 1567 184 0 23 chr2 98817967 98818266 -151869588 + AluJo SINE Alu 1 292 -20 5538 220 31 36 chr2 98818266 98819238 -151868616 - L1M4 LINE L1 -2386 4258 3317 1056 279 27 34 chr2 98819239 98819362 -151868492 - L1M4 LINE L1 -4613 2033 1911 2056 141 0 3 chr2 98819362 98819674 -151868180 - AluSx SINE Alu -1 311 1 1056 279 27 34 chr2 98819674 98819959 -151867895 - L1M4 LINE L1 -4735 1911 1628 1581 250 36 2 chr2 98819966 98820442 -151867412 - L1M4 LINE L1 -4974 1568 1077 2730 80 97 7 chr2 98820452 98820863 -151866991 - LTR7 LTR ERV1 -2 448 1 992 296 109 15 chr2 98821466 98821933 -151865921 + LTR33A LTR ERVL 13 523 0 220 253 51 89 chr2 98822343 98822422 -151865432 + L2 LINE L2 3208 3283 -30 574 282 0 20 chr2 98822444 98822593 -151865261 + MER5B DNA MER1_type 1 146 -32 236 200 15 62 chr2 98822701 98822766 -151865088 - L2 LINE L2 -1 3312 3251 521 198 192 6 chr2 98822766 98822919 -151864935 + MER5A DNA MER1_type 4 189 0 186 247 41 55 chr2 98823861 98823934 -151863920 + MIR SINE MIR 79 150 -112 1067 117 12 0 chr2 98824201 98824363 -151863491 - L1MA10 LINE L1 -1 6333 6170 2404 127 28 14 chr2 98824419 98824774 -151863080 + THE1B LTR MaLR 5 364 0 371 188 265 0 chr2 98824790 98824898 -151862956 - MLT1J2 LTR MaLR -32 407 288 779 184 0 13 chr2 98824899 98825051 -151862803 - L1PB4 LINE L1 -1 6155 6006 925 192 6 0 chr2 98826157 98826324 -151861530 - AluSp SINE Alu -14 299 132 1866 156 0 0 chr2 98826337 98826626 -151861228 - AluSx SINE Alu -23 289 1 2169 113 3 0 chr2 98826640 98826940 -151860914 - AluSq SINE Alu -12 301 1 1699 210 3 3 chr2 98827231 98827531 -151860323 + MLT1A1 LTR MaLR 5 304 -61 4493 153 122 44 chr2 98827649 98828643 -151859211 - MER11C LTR ERVK 0 1071 1 435 246 14 87 chr2 98829415 98829553 -151858301 - MER91B DNA MER1_type -62 128 1 1952 123 27 0 chr2 98829706 98829999 -151857855 - AluSx SINE Alu -11 301 1 353 289 48 10 chr2 98830509 98830613 -151857241 + MLT1J2 LTR MaLR 341 448 -2 2152 81 30 0 chr2 98831028 98831323 -151856531 - AluSp SINE Alu -4 309 6 1712 134 0 53 chr2 98831361 98831694 -151856160 + AluJb SINE Alu 1 317 0 1212 222 82 53 chr2 98832226 98832713 -151855141 - MER69 DNA AcHobo -7 2519 2019 1071 236 57 116 chr2 98832718 98832995 -151854859 - MER69 DNA AcHobo -1727 799 562 2206 79 10 0 chr2 98832995 98833285 -151854569 + AluSp SINE Alu 1 293 -20 1071 236 57 116 chr2 98833285 98833498 -151854356 - MER69 DNA AcHobo -1964 562 338 209 125 0 25 chr2 98833521 98833561 -151854293 + (TA)n Simple_repeat Simple_repeat 1 39 0 609 201 157 19 chr2 98833640 98833799 -151854055 - MER5A DNA MER1_type 0 189 9 2185 109 0 0 chr2 98834347 98834651 -151853203 - AluSx SINE Alu -8 304 1 22666 122 16 57 chr2 98834651 98835274 -151852580 - L1M1 LINE L1 -3956 3609 2962 2042 123 0 3 chr2 98835274 98835575 -151852279 - AluSx SINE Alu -12 300 1 965 113 0 0 chr2 98835578 98835711 -151852143 - AluSq/x SINE Alu -180 133 1 22666 122 16 57 chr2 98835711 98838714 -151849140 - L1M1 LINE L1 -4605 2960 1 794 187 0 0 chr2 98838815 98838949 -151848905 + FLAM_C SINE Alu 1 134 -9 794 215 265 67 chr2 98838950 98839354 -151848500 - L1MC5 LINE L1 -849 7112 6629 904 315 50 22 chr2 98839410 98839947 -151847907 - HAL1b LINE L1 -735 613 62 1393 199 127 14 chr2 98839958 98840319 -151847535 - L1MC1 LINE L1 -18 6315 5914 1795 143 12 3 chr2 98841014 98841336 -151846518 + L1 LINE L1 5036 5360 -786 555 246 14 7 chr2 98841698 98841836 -151846018 - MLT1D LTR MaLR -275 230 92 4658 215 95 47 chr2 98841962 98842187 -151845667 - L1MD3 LINE L1 -877 7118 6905 402 21 0 0 chr2 98842187 98842234 -151845620 + (TG)n Simple_repeat Simple_repeat 2 48 0 4658 215 95 47 chr2 98842234 98842474 -151845380 - L1MD3 LINE L1 -1090 6905 6678 291 114 0 0 chr2 98842474 98842518 -151845336 + (CA)n Simple_repeat Simple_repeat 2 45 0 4658 215 95 47 chr2 98842518 98843315 -151844539 - L1MD3 LINE L1 -1317 6678 5763 820 181 0 0 chr2 98843315 98843448 -151844406 - FLAM_A SINE Alu 0 133 1 4658 215 95 47 chr2 98843448 98843753 -151844101 - L1MD3 LINE L1 -2232 5763 5474 366 168 21 21 chr2 98843956 98844051 -151843803 + GA-rich Low_complexity Low_complexity 4 98 0 194 167 250 71 chr2 98845047 98845131 -151842723 - MIR SINE MIR -118 144 46 517 203 51 51 chr2 98846670 98846828 -151841026 + MER112 DNA MER1_type 17 174 -86 305 234 32 73 chr2 98846851 98846975 -151840879 + L1MC5 LINE L1 7606 7724 -237 843 205 99 122 chr2 98846977 98846999 -151840855 - MER4C LTR ERV1 0 465 444 2057 121 0 7 chr2 98846999 98847296 -151840558 + AluSx SINE Alu 1 295 -17 843 205 99 122 chr2 98847296 98847747 -151840107 - MER4C LTR ERV1 -21 444 3 452 217 77 28 chr2 98847849 98847992 -151839862 + L1MC5 LINE L1 7782 7931 -30 290 268 0 0 chr2 98847996 98848067 -151839787 + MER112 DNA MER1_type 178 248 -12 338 286 67 9 chr2 98848089 98848194 -151839660 - MER5B DNA MER1_type -13 165 55 354 255 161 7 chr2 98848302 98848451 -151839403 - MER5A DNA MER1_type -1 188 17 234 268 42 14 chr2 98849008 98849079 -151838775 + MIR SINE MIR 78 150 -112 1207 196 139 4 chr2 98849218 98849484 -151838370 - AluJo SINE Alu 0 302 1 277 303 92 0 chr2 98849516 98849592 -151838262 - MER91A DNA MER1_type 0 196 114 2093 132 0 3 chr2 98849857 98850191 -151837663 - AluSx SINE Alu 0 333 1 406 331 24 0 chr2 98850194 98850321 -151837533 - MIR SINE MIR -59 149 20 1915 115 0 41 chr2 98852020 98852334 -151835520 + AluSx SINE Alu 1 301 -11 187 311 189 9 chr2 98853157 98853263 -151834591 - MER5B DNA MER1_type -36 142 18 1976 226 131 26 chr2 98855398 98855833 -151832021 - MLT1E2 LTR MaLR 0 626 117 2562 84 49 0 chr2 98855833 98856180 -151831674 - THE1B LTR MaLR 0 364 1 1976 226 131 26 chr2 98856180 98856311 -151831543 - MLT1E2 LTR MaLR -509 117 1 704 274 6 0 chr2 98856313 98856477 -151831377 - MIR SINE MIR -6 256 92 1666 142 94 3 chr2 98856500 98856809 -151831045 + MSTA LTR MaLR 92 428 0 301 200 29 129 chr2 98856851 98856991 -151830863 + L1ME4a LINE L1 5906 6031 -90 2175 82 3 10 chr2 98858281 98858587 -151829267 + AluY SINE Alu 1 304 -7 359 290 84 19 chr2 98858732 98858839 -151829015 - MIR3 SINE MIR -13 195 82 204 347 0 13 chr2 98860556 98860631 -151827223 + CT-rich Low_complexity Low_complexity 3 76 0 207 167 0 0 chr2 98862359 98862401 -151825453 + CT-rich Low_complexity Low_complexity 1 42 0 219 311 28 38 chr2 98866267 98866373 -151821481 - L3 LINE CR1 -651 926 822 341 248 291 0 chr2 98866513 98866630 -151821224 - MIR SINE MIR -59 203 53 * 399 290 103 48 chr2 98866625 98866915 -151820939 - L3 LINE CR1 -841 736 431 339 291 0 16 chr2 98867390 98867527 -151820327 + MIR SINE MIR 18 149 -73 201 343 77 41 chr2 98867915 98868084 -151819770 + MIR3 SINE MIR 30 204 -4 656 269 66 18 chr2 98869718 98869945 -151817909 - MIR SINE MIR -17 245 8 1865 147 23 7 chr2 98871344 98871650 -151816204 + AluSx SINE Alu 1 311 -1 304 346 9 9 chr2 98871744 98871851 -151816003 - MIR SINE MIR -76 132 26 210 248 44 124 chr2 98871958 98872071 -151815783 + L2 LINE L2 3166 3269 -3 242 244 143 8 chr2 98872142 98872261 -151815593 + MIR SINE MIR 88 222 -40 189 107 0 0 chr2 98872784 98872812 -151815042 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 496 213 25 8 chr2 98873020 98873142 -151814712 - MIR SINE MIR -48 214 91 2607 186 82 52 chr2 98873181 98873887 -151813967 + LTR8A LTR ERV1 1 727 0 4237 224 31 56 chr2 98874935 98874975 -151812879 + L1PA10 LINE L1 3 42 -6419 2303 76 0 25 chr2 98874975 98875292 -151812562 + AluY SINE Alu 1 309 -2 4237 224 31 56 chr2 98875292 98877142 -151810712 + L1PA10 LINE L1 42 2043 -4418 1143 127 0 0 chr2 98877142 98877300 -151810554 - AluSx SINE Alu -145 167 10 833 115 0 0 chr2 98877303 98877425 -151810429 + AluSg/x SINE Alu 173 294 -18 5790 148 7 16 chr2 98877425 98878062 -151809792 + L1PA10 LINE L1 2033 2660 -3801 2019 127 0 0 chr2 98878062 98878373 -151809481 - AluSx SINE Alu 0 311 1 5790 148 7 16 chr2 98878373 98878712 -151809142 + L1PA10 LINE L1 2660 3001 -3460 777 140 7 1 chr2 98878739 98878902 -151808952 + L1PA10 LINE L1 4272 4412 -2049 7022 97 15 19 chr2 98878903 98879988 -151807866 + L1PA10 LINE L1 4536 5623 -889 2420 75 0 3 chr2 98879988 98880295 -151807559 + AluSq SINE Alu 1 306 -7 7022 97 15 19 chr2 98880295 98880462 -151807392 + L1PA10 LINE L1 5623 5789 -723 2398 70 0 0 chr2 98880462 98880764 -151807090 + AluY SINE Alu 1 302 -9 7022 97 15 19 chr2 98880764 98881478 -151806376 + L1PA10 LINE L1 5789 6512 0 422 292 42 12 chr2 98881510 98881678 -151806176 - MIR SINE MIR 0 262 90 464 273 41 0 chr2 98881848 98881969 -151805885 - L2 LINE L2 -2 3270 3145 351 299 206 11 chr2 98882190 98882374 -151805480 - MIR SINE MIR -16 246 27 1637 259 71 50 chr2 98882400 98882995 -151804859 + MER115 DNA AcHobo 3 609 -84 494 318 108 11 chr2 98883215 98883492 -151804362 + LTR16C LTR ERVL 174 477 -14 355 238 48 0 chr2 98883513 98883597 -151804257 + Zaphod DNA AcHobo 3942 4029 -2 1079 211 179 25 chr2 98883777 98884252 -151803602 - L1MC5 LINE L1 -397 7564 7017 287 315 69 46 chr2 98884821 98884951 -151802903 - L2 LINE L2 -21 3251 3119 300 326 0 16 chr2 98885441 98885570 -151802284 - MIR SINE MIR -1 261 135 189 268 0 28 chr2 98886593 98886664 -151801190 + MIR SINE MIR 23 91 -117 22 70 0 0 chr2 98886885 98886928 -151800926 + AT_rich Low_complexity Low_complexity 1 43 0 1127 257 19 3 chr2 98887236 98887555 -151800299 + L1MB1 LINE L1 3725 4048 -2098 318 261 36 9 chr2 98887553 98887664 -151800190 + L1MB1 LINE L1 5114 5227 -919 * 298 220 0 0 chr2 98887664 98887723 -151800131 - AluJ/monomer SINE Alu 0 300 242 3053 221 52 44 chr2 98887823 98888973 -151798881 - L1MDb LINE L1 -2649 3891 2714 683 246 61 33 chr2 98888970 98889301 -151798553 - L1MDb LINE L1 -5196 1334 991 * 279 323 25 50 chr2 98890117 98890315 -151797539 - L1MDb LINE L1 -6347 193 1 192 317 120 35 chr2 98890388 98890530 -151797324 - L2 LINE L2 -853 2461 2308 2798 177 13 8 chr2 98890812 98891338 -151796516 + L1MB1 LINE L1 5639 6167 -1 612 50 0 0 chr2 98893775 98893855 -151793999 - Alu SINE Alu -5 304 225 325 311 104 0 chr2 98893958 98894093 -151793761 - L1M4 LINE L1 -1587 4559 4411 558 207 23 37 chr2 98894093 98894146 -151793708 - MER82 DNA MER2_type 0 653 601 2249 114 83 41 chr2 98894146 98894511 -151793343 - MSTA LTR MaLR 0 428 43 1866 148 3 16 chr2 98894511 98894816 -151793038 - AluSx SINE Alu -11 301 1 2249 114 83 41 chr2 98894816 98894861 -151792993 - MSTA LTR MaLR -385 43 1 558 207 23 37 chr2 98894861 98894987 -151792867 - MER82 DNA MER2_type -52 601 433 1066 186 88 0 chr2 98894987 98895213 -151792641 - MER82 DNA MER2_type -407 246 1 575 288 124 23 chr2 98895214 98895471 -151792383 - L1M4 LINE L1 -1735 4411 4129 371 254 73 9 chr2 98895550 98895660 -151792194 - L3 LINE CR1 -11 1566 1450 189 107 0 0 chr2 98895831 98895859 -151791995 + (TTA)n Simple_repeat Simple_repeat 2 29 0 354 229 18 28 chr2 98896032 98896141 -151791713 - L1MEc LINE L1 -4521 1875 1768 180 111 0 0 chr2 98896166 98896193 -151791661 + (T)n Simple_repeat Simple_repeat 1 27 0 1589 87 0 23 chr2 98896218 98896436 -151791418 - AluSx SINE Alu -99 213 1 3235 226 44 21 chr2 98896439 98897249 -151790605 - L1MEc LINE L1 -5531 865 37 442 289 88 42 chr2 98899848 98900108 -151787746 + MARNA DNA Mariner 15 286 -300 247 320 25 59 chr2 98900254 98900457 -151787397 + MARNA DNA Mariner 332 527 -59 23 0 0 0 chr2 98901936 98901959 -151785895 + AT_rich Low_complexity Low_complexity 1 23 0 2079 118 13 0 chr2 98901979 98902285 -151785569 - AluSx SINE Alu 0 312 3 21 0 0 0 chr2 98903341 98903362 -151784492 + AT_rich Low_complexity Low_complexity 1 21 0 4986 49 0 0 chr2 98903459 98904050 -151783804 + LTR10C LTR ERV1 1 591 0 227 288 136 84 chr2 98904792 98905233 -151782621 - L2 LINE L2 0 3272 2809 461 278 53 43 chr2 98905439 98905648 -151782206 - L2 LINE L2 -818 2496 2286 208 242 167 0 chr2 98905752 98905817 -151782037 - MIR SINE MIR -175 87 12 247 226 71 24 chr2 98905817 98905901 -151781953 - MER5B DNA MER1_type -3 175 88 324 0 0 0 chr2 98907719 98907755 -151780099 + (CA)n Simple_repeat Simple_repeat 2 37 0 674 254 115 9 chr2 98908417 98908634 -151779220 + MIR SINE MIR 9 248 -14 269 290 287 22 chr2 98908745 98909062 -151778792 - L2 LINE L2 -1 3271 2871 354 239 141 24 chr2 98909215 98909470 -151778384 + L1M4 LINE L1 5030 5314 -832 377 238 26 132 chr2 98909639 98909828 -151778026 - MIR SINE MIR -29 233 65 2377 71 7 0 chr2 98909859 98910168 -151777686 - AluY SINE Alu 0 311 1 223 82 0 41 chr2 98910612 98910661 -151777193 + (GGA)n Simple_repeat Simple_repeat 2 48 0 649 317 81 28 chr2 98911235 98911557 -151776297 + L3 LINE CR1 1024 1362 -215 4077 112 13 58 chr2 98911893 98912563 -151775291 + MER51C LTR ERV1 1 640 0 717 150 0 0 chr2 98912670 98912803 -151775051 + (AATAG)n Simple_repeat Simple_repeat 3 135 0 2260 102 0 0 chr2 98913795 98914099 -151773755 + AluSq SINE Alu 1 304 -9 528 104 13 0 chr2 98914154 98914231 -151773623 - MADE1 DNA Mariner -2 78 1 45 34 0 0 chr2 98914248 98914307 -151773547 + AT_rich Low_complexity Low_complexity 1 59 0 277 277 15 0 chr2 98915045 98915110 -151772744 + MER58B DNA MER1_type 252 317 -24 259 314 78 33 chr2 98916223 98916376 -151771478 - MIR SINE MIR -50 212 53 240 35 0 0 chr2 98916943 98916972 -151770882 + (T)n Simple_repeat Simple_repeat 1 29 0 180 0 0 0 chr2 98916972 98916992 -151770862 + (TG)n Simple_repeat Simple_repeat 1 20 0 1921 236 65 42 chr2 98917017 98917682 -151770172 + L1MC4 LINE L1 7363 8042 0 2270 117 3 0 chr2 98918293 98918601 -151769253 - AluSx SINE Alu -3 309 1 30 27 0 0 chr2 98918937 98918974 -151768880 + AT_rich Low_complexity Low_complexity 1 37 0 1817 109 60 39 chr2 98919037 98919322 -151768532 - AluSx SINE Alu -21 291 1 336 385 22 6 chr2 98919408 98919587 -151768267 + L2 LINE L2 2225 2406 -908 365 299 108 53 chr2 98919616 98919990 -151767864 + L2 LINE L2 2648 3046 -226 840 303 69 38 chr2 98920008 98920430 -151767424 + L2 LINE L2 2874 3308 -5 2395 128 125 8 chr2 98920852 98921235 -151766619 + MSTA LTR MaLR 1 428 0 715 251 40 20 chr2 98921763 98921962 -151765892 + HAL1 LINE L1 1514 1716 -791 203 224 20 0 chr2 98922039 98922088 -151765766 + (TA)n Simple_repeat Simple_repeat 2 51 0 312 356 18 12 chr2 98922697 98922860 -151764994 + L1ME LINE L1 334 497 -5573 947 272 59 48 chr2 98922927 98923471 -151764383 + L1ME LINE L1 465 1014 -5056 292 154 13 13 chr2 98923805 98923883 -151763971 - MER5C DNA MER1_type -42 282 205 4521 201 32 52 chr2 98924516 98925748 -151762106 + L1MB7 LINE L1 3658 4864 -1282 614 220 47 43 chr2 98925746 98926255 -151761599 + L1MB7 LINE L1 5564 6181 -3 * 427 296 88 6 chr2 98927366 98927525 -151760329 + MIR3 SINE MIR 13 184 -24 2137 134 3 7 chr2 98928545 98928851 -151759003 + AluSx SINE Alu 1 305 -7 572 285 19 14 chr2 98931611 98931818 -151756036 + LTR33 LTR ERVL 305 512 -9 2172 204 162 65 chr2 98932441 98933194 -151754660 + LTR1B LTR ERV1 1 826 0 327 366 38 5 chr2 98935392 98935605 -151752249 + L2 LINE L2 1738 1957 -1357 234 309 106 11 chr2 98935761 98935855 -151751999 + MIR SINE MIR 32 134 -128 339 318 65 29 chr2 98935932 98936102 -151751752 + L2 LINE L2 2227 2402 -912 364 265 165 36 chr2 98936114 98936363 -151751491 - L2 LINE L2 -1 3312 3032 199 280 139 56 chr2 98936576 98936901 -151750953 + L2 LINE L2 2673 3061 -211 201 324 46 46 chr2 98936988 98937096 -151750758 - L2 LINE L2 -1 3271 3164 332 263 42 11 chr2 98937617 98937712 -151750142 + L2 LINE L2 3215 3312 -1 188 163 23 0 chr2 98938022 98938065 -151749789 + A-rich Low_complexity Low_complexity 4 47 0 1223 231 59 0 chr2 98938253 98938543 -151749311 - MSTD LTR MaLR -2 394 88 3544 166 104 25 chr2 98938599 98939359 -151748495 + MER21B LTR ERV1 13 832 -31 513 128 44 16 chr2 98939367 98939480 -151748374 - MSTD LTR MaLR -304 92 1 566 303 69 21 chr2 98939524 98939857 -151747997 + L1ME4a LINE L1 5578 5926 -195 720 240 95 35 chr2 98940010 98940210 -151747644 - MIR SINE MIR -48 214 3 215 140 20 0 chr2 98940659 98940709 -151747145 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 594 339 48 44 chr2 98941499 98941913 -151745941 + L1MB7 LINE L1 381 1054 -5217 531 265 12 93 chr2 98942046 98942303 -151745551 + L1MB7 LINE L1 1039 1274 -5007 1256 194 21 5 chr2 98942618 98942927 -151744927 + L1M3 LINE L1 1222 1539 -4742 8460 35 0 0 chr2 98942933 98943948 -151743906 - L1P LINE L1 -2295 3851 2837 14337 21 0 3 chr2 98943948 98946295 -151741559 + L1PA3 LINE L1 3813 6154 -1 418 90 75 0 chr2 98946343 98946410 -151741444 + L1 LINE L1 4498 4569 -1577 * 12158 203 46 14 chr2 98946408 98949411 -151738443 + L1M3 LINE L1 2622 5721 -654 1045 232 32 4 chr2 98949413 98949659 -151738195 + L1MB7 LINE L1 1335 1587 -4765 283 200 14 0 chr2 98949761 98949831 -151738023 + L1MB7 LINE L1 5581 5651 -731 678 187 113 87 chr2 98949831 98950061 -151737793 - MER2 DNA MER2_type 0 345 110 2814 137 29 2 chr2 98950061 98950478 -151737376 + MSTA LTR MaLR 1 428 0 308 77 0 0 chr2 98950498 98950537 -151737317 - MADE1 DNA Mariner -41 39 1 * 557 206 0 19 chr2 98950537 98950643 -151737211 - MER2 DNA MER2_type -241 104 1 330 71 0 0 chr2 98950866 98950908 -151736946 - MLT2B2 LTR ERVL -7 513 472 584 194 0 0 chr2 98950911 98951019 -151736835 + Tigger2 DNA MER2_type 4 111 -2607 1232 182 5 9 chr2 98951024 98951238 -151736616 + Tigger2 DNA MER2_type 2506 2718 0 * 1388 158 302 2 chr2 98951238 98951598 -151736256 - MLT2B2 LTR ERVL -43 477 5 3647 158 16 42 chr2 98951610 98952304 -151735550 + L1MB7 LINE L1 5711 6386 -2 694 175 6 56 chr2 98952406 98952529 -151735325 - MIR SINE MIR 0 262 147 2521 92 63 20 chr2 98952529 98952878 -151734976 - THE1B LTR MaLR 0 364 1 694 175 6 56 chr2 98952878 98952914 -151734940 - MIR SINE MIR -115 147 111 640 262 51 40 chr2 98953812 98954035 -151733819 - MIR SINE MIR -18 244 25 281 176 255 20 chr2 98954886 98954988 -151732866 + MLT1J2 LTR MaLR 3 128 -322 295 330 81 81 chr2 98955077 98955362 -151732492 + L2 LINE L2 2906 3190 -82 186 43 0 0 chr2 98958020 98958043 -151729811 + (CA)n Simple_repeat Simple_repeat 2 24 0 364 364 0 0 chr2 98959049 98959192 -151728662 - L3b LINE CR1 -180 1403 1261 267 269 69 8 chr2 98960174 98960304 -151727550 - L1ME3A LINE L1 -230 5940 5803 650 283 103 74 chr2 98961556 98962108 -151725746 + L3 LINE CR1 552 1119 -458 1864 148 13 26 chr2 98962143 98962447 -151725407 + AluJo SINE Alu 1 300 -12 21 0 0 0 chr2 98962540 98962561 -151725293 + AT_rich Low_complexity Low_complexity 1 21 0 229 305 73 20 chr2 98962713 98962864 -151724990 - L1ME3A LINE L1 -360 5761 5603 353 300 117 4 chr2 98962867 98963143 -151724711 - L1ME3A LINE L1 -669 5573 5270 2377 85 0 22 chr2 98963323 98963641 -151724213 - AluY SINE Alu 0 311 1 619 262 71 6 chr2 98963888 98964056 -151723798 + LTR41 LTR ERVL 3 181 -592 380 241 87 102 chr2 98964489 98964755 -151723099 + LTR41 LTR ERVL 511 772 -1 3276 215 75 28 chr2 98964824 98965300 -151722554 + L1ME2 LINE L1 4106 4558 -1588 2078 103 0 4 chr2 98965300 98965572 -151722282 - AluY SINE Alu -20 291 21 3276 215 75 28 chr2 98965572 98966142 -151721712 + L1ME2 LINE L1 4558 5202 -944 322 200 0 0 chr2 98966140 98966200 -151721654 + L1MC4 LINE L1 7526 7585 -457 * 428 117 13 0 chr2 98966213 98966290 -151721564 + (TGGA)n Simple_repeat Simple_repeat 3 80 0 1737 182 12 92 chr2 98966304 98966626 -151721228 + L1MC4 LINE L1 7591 7937 -105 2405 88 0 10 chr2 98966626 98966932 -151720922 + AluSg SINE Alu 1 303 -7 243 61 0 0 chr2 98966935 98966968 -151720886 + (TG)n Simple_repeat Simple_repeat 1 33 0 1737 182 12 92 chr2 98966968 98967130 -151720724 + L1MC4 LINE L1 7939 8040 -2 * 2469 230 40 31 chr2 98967118 98968004 -151719850 + L1ME2 LINE L1 5171 6152 -12 272 227 0 53 chr2 98968240 98968315 -151719539 + L2 LINE L2 2413 2483 -831 846 102 8 0 chr2 98968315 98968442 -151719412 - AluSp/q SINE Alu -2 311 184 621 273 5 21 chr2 98968444 98968631 -151719223 + L2 LINE L2 2476 2659 -655 1039 281 126 11 chr2 98968635 98969016 -151718838 + L2 LINE L2 2882 3306 -7 189 147 0 0 chr2 98969757 98969791 -151718063 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 278 286 0 0 chr2 98969794 98969871 -151717983 + T-rich Low_complexity Low_complexity 1 77 0 218 311 44 22 chr2 98970547 98970637 -151717217 - MIR SINE MIR 0 262 171 25 0 0 0 chr2 98970707 98970732 -151717122 + AT_rich Low_complexity Low_complexity 1 25 0 407 89 0 0 chr2 98970732 98970788 -151717066 - L1PA5 LINE L1 -1 6153 6098 265 287 115 0 chr2 98972322 98972409 -151715445 - MIR SINE MIR -8 254 158 264 351 52 15 chr2 98972631 98972765 -151715089 + MER5A DNA MER1_type 51 189 0 1454 66 0 10 chr2 98973049 98973245 -151714609 + AluY SINE Alu 118 311 0 363 160 106 0 chr2 98973258 98973352 -151714502 + L1MB2 LINE L1 6068 6171 0 922 241 24 61 chr2 98974227 98974522 -151713332 - MLT2C1 LTR ERVL -103 294 11 4333 228 58 22 chr2 98974541 98975930 -151711924 - L1M LINE L1 -744 5420 3997 2114 193 62 47 chr2 98975930 98976464 -151711390 - LTR55 LTR ERV -5 543 2 628 240 229 15 chr2 98976465 98976802 -151711052 - L1ME LINE L1 -2139 3941 3533 1955 152 7 0 chr2 98976818 98977127 -151710727 - AluJb SINE Alu -1 311 1 704 196 173 6 chr2 98977146 98977314 -151710540 - MLT1D LTR MaLR -44 461 266 901 235 87 55 chr2 98977314 98977364 -151710490 - L1ME LINE L1 -2532 3548 3501 1977 148 14 0 chr2 98977364 98977661 -151710193 - AluJo SINE Alu -11 301 1 901 235 87 55 chr2 98977661 98978048 -151709806 - L1ME LINE L1 -2579 3501 3097 * 1032 247 99 3 chr2 98978023 98978375 -151709479 - L1ME LINE L1 -3229 2851 2466 2207 256 75 39 chr2 98978569 98979677 -151708177 - L1ME LINE L1 -4501 1579 411 1877 184 0 0 chr2 98979677 98979971 -151707883 + AluSx SINE Alu 1 294 -18 2207 256 75 39 chr2 98979971 98980213 -151707641 - L1ME LINE L1 -5669 411 179 902 285 102 75 chr2 98980287 98981992 -151705862 - L1ME LINE L1 -4614 1466 58 2339 85 7 0 chr2 98981994 98982299 -151705555 - THE1B LTR MaLR -57 307 1 10092 126 79 3 chr2 98982299 98983767 -151704087 - THE1B-int LTR MaLR 0 1580 1 2772 105 6 0 chr2 98983767 98984128 -151703726 - THE1B LTR MaLR 0 364 2 1768 191 0 0 chr2 98984209 98984223 -151703631 - AluSx SINE Alu -18 294 281 327 25 0 0 chr2 98984223 98984263 -151703591 + (TG)n Simple_repeat Simple_repeat 1 40 0 1768 191 0 0 chr2 98984263 98984542 -151703312 - AluSx SINE Alu -30 282 1 632 216 118 26 chr2 98984544 98985021 -151702833 - L1MC/D LINE L1 -743 5403 4903 352 226 0 0 chr2 98985072 98985134 -151702720 - MER2 DNA MER2_type -1 344 283 * 925 225 11 6 chr2 98985110 98985288 -151702566 - MER8 DNA MER2_type -60 179 1 242 125 21 0 chr2 98985289 98985337 -151702517 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 2097 92 17 14 chr2 98985404 98985698 -151702156 - L1PA13 LINE L1 -4 6159 5865 4019 144 22 34 chr2 99035698 99036482 -151651372 - pTR5 LTR ERV1 -922 1516 743 26 30 0 0 chr2 99037391 99037424 -151650430 + AT_rich Low_complexity Low_complexity 1 33 0 622 174 42 100 chr2 99037617 99037876 -151649978 + MER96B DNA MER1_type? 81 324 -93 3569 129 28 28 chr2 99037878 99038513 -151649341 + L1MB3 LINE L1 5373 6007 -176 984 206 80 121 chr2 99038513 99038926 -151648928 + MSTD LTR MaLR 1 396 0 795 155 95 24 chr2 99038926 99039094 -151648760 + L1MB3 LINE L1 6003 6182 -1 2920 7 0 0 chr2 99039669 99039978 -151647876 + AluYa5 SINE Alu 1 309 -2 2593 227 104 27 chr2 99040664 99042173 -151645681 + L1MEc LINE L1 1325 2948 -3267 1865 104 39 4 chr2 99042173 99042433 -151645421 - AluSg SINE Alu -41 269 1 2593 227 104 27 chr2 99042433 99042568 -151645286 + L1MEc LINE L1 2948 3071 -3144 2822 168 19 2 chr2 99042840 99043353 -151644501 + L1MA5 LINE L1 5779 6300 0 372 22 0 0 chr2 99043856 99043901 -151643953 + (CA)n Simple_repeat Simple_repeat 2 46 0 213 94 0 0 chr2 99043901 99043933 -151643921 + (GGGAGA)n Simple_repeat Simple_repeat 3 34 0 3871 291 131 31 chr2 99044221 99047001 -151640853 - L2 LINE L2 -56 3257 189 329 251 76 70 chr2 99047020 99047191 -151640663 - L2 LINE L2 -2008 1306 1135 223 204 19 0 chr2 99047192 99047246 -151640608 - L2 LINE L2 -3191 123 69 207 338 40 68 chr2 99047404 99047552 -151640302 + MIR3 SINE MIR 4 147 -61 269 362 184 0 chr2 99047644 99047829 -151640025 - MIR SINE MIR -9 253 35 222 238 32 16 chr2 99047833 99047896 -151639958 + L2 LINE L2 3197 3260 -12 189 0 0 0 chr2 99048348 99048369 -151639485 + (A)n Simple_repeat Simple_repeat 1 21 0 2231 96 41 0 chr2 99048773 99049064 -151638790 - AluSx SINE Alu -9 303 1 494 222 10 0 chr2 99049782 99049881 -151637973 + MER5A DNA MER1_type 4 103 -86 317 71 0 0 chr2 99050850 99050892 -151636962 + MADE1 DNA Mariner 39 80 0 263 250 0 112 chr2 99051026 99051142 -151636712 + MIR SINE MIR 36 138 -70 1971 146 17 0 chr2 99051210 99051512 -151636342 + AluSx SINE Alu 1 307 -5 655 148 28 23 chr2 99051515 99051691 -151636163 + GA-rich Low_complexity Low_complexity 4 180 0 209 161 0 0 chr2 99051693 99051724 -151636130 + polypurine Low_complexity Low_complexity 4 34 0 764 146 36 21 chr2 99051736 99052071 -151635783 + GA-rich Low_complexity Low_complexity 1 340 0 633 206 73 24 chr2 99052537 99052702 -151635152 - MER63A DNA MER1_type -37 173 1 805 158 30 18 chr2 99052866 99053030 -151634824 - MER5B DNA MER1_type -1 177 12 405 152 29 29 chr2 99055153 99055258 -151632596 + GA-rich Low_complexity Low_complexity 3 107 0 2359 84 3 0 chr2 99055943 99056239 -151631615 + AluY SINE Alu 1 297 -14 2251 98 7 3 chr2 99056290 99056597 -151631257 - AluY SINE Alu -3 308 1 812 260 111 54 chr2 99056778 99057274 -151630580 + L1MC4a LINE L1 5527 6050 -1758 2045 161 0 0 chr2 99057538 99057848 -151630006 - AluJo SINE Alu -2 310 1 193 281 56 80 chr2 99058634 99058883 -151628971 + L2 LINE L2 2992 3234 -38 23 0 0 0 chr2 99058936 99058959 -151628895 + AT_rich Low_complexity Low_complexity 1 23 0 723 278 48 52 chr2 99060520 99060959 -151626895 - LTR67 LTR ERVL 0 557 121 212 270 45 63 chr2 99061223 99061334 -151626520 - L2 LINE L2 -5 3308 3200 823 238 26 9 chr2 99061806 99062037 -151625817 + L1MDb LINE L1 931 1165 -5378 * 3638 235 59 45 chr2 99062035 99062177 -151625677 + L1MDb LINE L1 1478 1617 -4923 2328 82 0 0 chr2 99062177 99062489 -151625365 + AluY SINE Alu 3 314 0 3638 235 59 45 chr2 99062489 99063772 -151624082 + L1MDb LINE L1 1617 2921 -3619 5223 233 56 31 chr2 99065635 99066631 -151621223 + L1MDb LINE L1 2941 3996 -2544 2016 132 3 3 chr2 99066631 99066927 -151620927 - AluSx SINE Alu -16 296 1 5223 233 56 31 chr2 99066927 99067587 -151620267 + L1MDb LINE L1 3996 4638 -1902 1326 200 76 48 chr2 99067593 99067923 -151619931 + MER2 DNA MER2_type 1 339 -6 2293 276 27 18 chr2 99067928 99068624 -151619230 + L1MDb LINE L1 4642 5350 -1190 2160 96 0 7 chr2 99068624 99068933 -151618921 + AluSc SINE Alu 1 307 0 2293 276 27 18 chr2 99068933 99069083 -151618771 + L1MDb LINE L1 5350 5497 -1043 * 3534 218 88 59 chr2 99069071 99071193 -151616661 + L1MD3 LINE L1 2918 4977 -3018 2240 106 0 3 chr2 99071193 99071494 -151616360 - AluY SINE Alu -11 300 1 3534 218 88 59 chr2 99071494 99071923 -151615931 + L1MD3 LINE L1 4977 5392 -2603 1881 231 85 12 chr2 99071923 99072407 -151615447 + LTR40a LTR ERVL 1 519 0 3534 218 88 59 chr2 99072407 99072653 -151615201 + L1MD3 LINE L1 5392 5629 -2366 2327 58 0 4 chr2 99072653 99072930 -151614924 - AluY SINE Alu -15 296 21 3534 218 88 59 chr2 99072930 99074921 -151612933 + L1MD3 LINE L1 5629 7985 -10 3311 107 25 17 chr2 99075347 99075869 -151611985 - L1MA7 LINE L1 -1 6290 5765 687 190 0 0 chr2 99076472 99076588 -151611266 - FLAM_A SINE Alu -17 116 1 223 188 31 31 chr2 99077599 99077663 -151610191 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 2385 55 24 0 chr2 99077867 99078156 -151609698 + AluY SINE Alu 1 296 -15 204 377 6 6 chr2 99078242 99078361 -151609493 - MIR SINE MIR -64 144 26 2903 66 98 0 chr2 99079119 99079527 -151608327 + LTR7 LTR ERV1 1 448 -2 3048 241 47 27 chr2 99079859 99080832 -151607022 + L1MEc LINE L1 304 1296 -5100 415 191 0 19 chr2 99081013 99081118 -151606736 + GA-rich Low_complexity Low_complexity 2 104 0 6919 193 47 54 chr2 99081564 99083276 -151604578 - L1M4 LINE L1 -4833 1709 11 2307 81 0 10 chr2 99083363 99083660 -151604194 - AluSc SINE Alu -15 294 1 4061 145 65 30 chr2 99084721 99085479 -151602375 + LTR1 LTR ERV1 2 785 0 490 305 87 40 chr2 99085479 99086005 -151601849 + L2 LINE L2 2513 3051 -221 196 294 106 24 chr2 99086116 99086201 -151601653 + L2 LINE L2 3161 3252 -20 617 232 36 27 chr2 99086250 99086440 -151601414 - MIR SINE MIR -25 237 47 2267 98 0 7 chr2 99086440 99086735 -151601119 + AluSc SINE Alu 1 293 -16 617 232 36 27 chr2 99086735 99086757 -151601097 - MIR SINE MIR -215 47 27 566 261 115 24 chr2 99086860 99087147 -151600707 - MARNA DNA Mariner -144 442 130 231 103 0 0 chr2 99087177 99087216 -151600638 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 1846 154 0 27 chr2 99087216 99087508 -151600346 - AluJb SINE Alu -28 284 1 423 0 0 0 chr2 99087582 99087629 -151600225 + (CA)n Simple_repeat Simple_repeat 2 48 0 278 185 12 49 chr2 99087728 99087809 -151600045 - L1MA9 LINE L1 -6 6306 6229 * 929 191 108 0 chr2 99087806 99088037 -151599817 - L1MEc LINE L1 -4154 2242 1987 1471 244 61 58 chr2 99088038 99088744 -151599110 - L1MEc LINE L1 -4706 1690 983 366 23 0 0 chr2 99088935 99088978 -151598876 + (TG)n Simple_repeat Simple_repeat 2 44 0 3474 247 27 7 chr2 99089118 99089984 -151597870 - L1MEc LINE L1 -5426 970 88 234 0 0 0 chr2 99090519 99090545 -151597309 + (TG)n Simple_repeat Simple_repeat 2 27 0 1464 158 68 96 chr2 99090681 99090985 -151596869 - MLT1B LTR MaLR 0 390 97 2058 131 0 0 chr2 99090985 99091290 -151596564 - AluSx SINE Alu 0 305 1 1464 158 68 96 chr2 99091290 99091382 -151596472 - MLT1B LTR MaLR -293 97 4 418 177 7 129 chr2 99091843 99091990 -151595864 + MER5B DNA MER1_type 1 129 -49 424 244 163 50 chr2 99091999 99092159 -151595695 + MIR SINE MIR 48 225 -37 652 246 48 5 chr2 99092737 99092924 -151594930 + MIR SINE MIR 49 243 -19 23 33 0 0 chr2 99093050 99093080 -151594774 + AT_rich Low_complexity Low_complexity 1 30 0 1487 192 16 51 chr2 99093351 99093721 -151594133 + MER31B LTR ERV1 11 367 -99 2241 86 0 0 chr2 99093773 99094087 -151593767 - AluSc SINE Alu 0 314 1 552 194 72 164 chr2 99095144 99095336 -151592518 + L1MD1 LINE L1 5962 6170 -72 2067 108 0 7 chr2 99095336 99095615 -151592239 + AluSx SINE Alu 1 277 -35 552 194 72 164 chr2 99095615 99095646 -151592208 + L1MD1 LINE L1 6170 6202 -40 213 94 0 0 chr2 99095646 99095678 -151592176 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 552 194 72 164 chr2 99095678 99095757 -151592097 + L1MD1 LINE L1 6202 6237 -5 475 243 86 94 chr2 99095774 99096136 -151591718 - MLT1J LTR MaLR -149 362 4 240 59 0 0 chr2 99096995 99097029 -151590825 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2051 94 45 10 chr2 99097321 99097609 -151590245 - AluSx SINE Alu -14 298 1 1997 107 40 0 chr2 99097796 99098105 -151589749 + AluSx SINE Alu 1 320 0 346 232 145 22 chr2 99101226 99101364 -151586490 + MER5A DNA MER1_type 7 161 -28 561 311 96 0 chr2 99101712 99101921 -151585933 - MIR SINE MIR -6 256 28 244 291 78 48 chr2 99102254 99102357 -151585497 + L2 LINE L2 3111 3216 -56 229 277 145 0 chr2 99102404 99102487 -151585367 + L2 LINE L2 3161 3255 -17 192 274 32 32 chr2 99103086 99103148 -151584706 + L2 LINE L2 3205 3266 -6 2403 75 7 10 chr2 99103184 99103490 -151584364 + AluSx SINE Alu 2 306 -6 644 286 86 5 chr2 99105486 99105696 -151582158 - MIR SINE MIR -6 256 30 2003 109 46 0 chr2 99105941 99106225 -151581629 + AluSq SINE Alu 2 298 -15 311 227 45 23 chr2 99106293 99106381 -151581473 + L1MDa LINE L1 1570 1659 -4881 2534 119 44 21 chr2 99107553 99108103 -151579751 + MER51A LTR ERV1 1 634 0 543 303 170 49 chr2 99108935 99109262 -151578592 + L1ME4a LINE L1 5310 5596 -525 3121 24 0 29 chr2 99109262 99109645 -151578209 + L1PA5 LINE L1 5782 6153 -1 543 303 170 49 chr2 99109645 99110010 -151577844 + L1ME4a LINE L1 5596 6086 -35 1747 148 12 67 chr2 99111310 99111640 -151576214 + AluJo SINE Alu 1 312 0 245 236 14 14 chr2 99111752 99111824 -151576030 + HAL1b LINE L1 96 167 -1181 681 261 73 37 chr2 99111829 99112047 -151575807 + MIR SINE MIR 2 227 -35 868 230 103 86 chr2 99112047 99112486 -151575368 + HAL1b LINE L1 123 578 -770 2111 121 3 7 chr2 99112486 99112791 -151575063 + AluSx SINE Alu 8 311 -1 868 230 103 86 chr2 99112791 99113003 -151574851 + HAL1b LINE L1 578 785 -563 202 164 0 60 chr2 99113138 99113205 -151574649 + (CATA)n Simple_repeat Simple_repeat 2 64 0 267 194 88 153 chr2 99113213 99113312 -151574542 - MIR SINE MIR -58 204 125 1826 133 10 14 chr2 99113312 99113605 -151574249 + AluJo SINE Alu 21 312 0 267 194 88 153 chr2 99113605 99113721 -151574133 - MIR SINE MIR -137 125 3 351 192 27 0 chr2 99113807 99113880 -151573974 - MIR SINE MIR -111 151 77 1194 194 28 80 chr2 99113882 99114006 -151573848 - MER33 DNA MER1_type -2261 324 195 2101 113 10 0 chr2 99114006 99114297 -151573557 + AluSx SINE Alu 1 294 -18 1194 194 28 80 chr2 99114297 99114497 -151573357 - MER33 DNA MER1_type -2390 195 17 1970 167 70 39 chr2 99115699 99116112 -151571742 + MSTB LTR MaLR 1 426 0 2348 104 3 0 chr2 99117097 99117423 -151570431 - pTR5 LTR ERV1 -2046 392 66 233 203 63 25 chr2 99117423 99117502 -151570352 - LTR30 LTR ERV1 -80 642 561 189 327 53 18 chr2 99120408 99120521 -151567333 - MER5A DNA MER1_type -26 163 47 * 269 348 18 9 chr2 99120423 99120535 -151567319 + MER5A DNA MER1_type 55 167 -22 250 287 87 35 chr2 99120545 99120660 -151567194 + MER5A DNA MER1_type 61 181 -8 5380 111 26 42 chr2 99120660 99121494 -151566360 + L1MA4A LINE L1 5436 6257 -46 6774 99 34 8 chr2 99121494 99122439 -151565415 + LTR5 LTR ERVK 1 969 0 5380 111 26 42 chr2 99122439 99122480 -151565374 + L1MA4A LINE L1 6257 6297 -6 222 37 0 0 chr2 99122605 99122632 -151565222 + (CA)n Simple_repeat Simple_repeat 2 28 0 662 131 0 0 chr2 99122653 99122752 -151565102 - MER74A LTR ERVL 0 558 460 677 156 40 131 chr2 99122752 99122951 -151564903 + MLT1A2 LTR MaLR 3 183 -191 316 126 29 19 chr2 99122951 99123054 -151564800 + CT-rich Low_complexity Low_complexity 1 104 0 834 198 64 11 chr2 99123054 99123067 -151564787 + MLT1A2 LTR MaLR 173 184 -190 315 0 0 0 chr2 99123067 99123102 -151564752 + (CA)n Simple_repeat Simple_repeat 1 35 0 * 323 23 23 0 chr2 99123101 99123145 -151564709 + (TC)n Simple_repeat Simple_repeat 1 45 0 834 198 64 11 chr2 99123102 99123318 -151564536 + MLT1A2 LTR MaLR 184 369 -5 1969 169 82 14 chr2 99123321 99123758 -151564096 - MER74A LTR ERVL -91 467 1 180 0 0 0 chr2 99124736 99124756 -151563098 + (CA)n Simple_repeat Simple_repeat 1 20 0 219 268 110 0 chr2 99124934 99125016 -151562838 + MIR SINE MIR 60 150 -112 2479 68 3 3 chr2 99126364 99126675 -151561179 + AluY SINE Alu 1 311 0 405 271 169 34 chr2 99126780 99126957 -151560897 - MIR SINE MIR -61 201 1 181 292 21 0 chr2 99128094 99128142 -151559712 - L2 LINE L2 -1 3271 3223 279 0 0 0 chr2 99133551 99133582 -151554272 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 2521 38 0 0 chr2 99133582 99133873 -151553981 - LTR17 LTR ERV1 -455 325 35 1934 125 52 0 chr2 99134291 99134579 -151553275 + AluSx SINE Alu 1 303 -9 3157 235 35 52 chr2 99134769 99135561 -151552293 + L1PA13 LINE L1 1323 2098 -4689 1589 161 4 11 chr2 99135561 99135828 -151552026 + AluJb SINE Alu 40 304 -8 3157 235 35 52 chr2 99135828 99135961 -151551893 + L1PA13 LINE L1 2098 2232 -4555 1986 67 0 0 chr2 99136875 99137113 -151550741 - L1PA6 LINE L1 -4 6150 5913 241 299 65 28 chr2 99137440 99137547 -151550307 - L2 LINE L2 -13 3259 3149 27 29 0 0 chr2 99137659 99137693 -151550161 + AT_rich Low_complexity Low_complexity 1 34 0 481 301 18 6 chr2 99138151 99138317 -151549537 + L1ME LINE L1 3 170 -5900 336 164 0 0 chr2 99138342 99138397 -151549457 + L1ME LINE L1 496 550 -5520 1432 191 205 0 chr2 99138409 99138765 -151549089 + L1MB7 LINE L1 5748 6176 -8 1411 203 8 4 chr2 99138828 99139065 -151548789 - MER8 DNA MER2_type 0 239 2 1323 280 44 47 chr2 99139089 99139946 -151547908 + L1ME LINE L1 651 1505 -4756 2958 208 68 29 chr2 99139946 99140002 -151547852 + L1PA13 LINE L1 4728 4780 -1517 363 23 0 0 chr2 99140002 99140046 -151547808 + (CA)n Simple_repeat Simple_repeat 2 45 0 2958 208 68 29 chr2 99140046 99141226 -151546628 + L1PA13 LINE L1 4780 6140 -157 2563 130 8 19 chr2 99141226 99141594 -151546260 - THE1B LTR MaLR 0 364 1 2958 208 68 29 chr2 99141594 99141739 -151546115 + L1PA13 LINE L1 6140 6278 -19 9060 204 65 36 chr2 99141746 99143036 -151544818 + L1MDa LINE L1 1046 2298 -4242 2391 106 3 0 chr2 99143036 99143347 -151544507 + AluSp SINE Alu 1 312 -1 9060 204 65 36 chr2 99143347 99146112 -151541742 + L1MDa LINE L1 2298 5225 -1315 2305 86 0 0 chr2 99146112 99146437 -151541417 + AluY SINE Alu 1 311 0 9060 204 65 36 chr2 99146437 99146559 -151541295 + L1MDa LINE L1 5225 5342 -1198 844 159 8 23 chr2 99146591 99146723 -151541131 - FRAM SINE Alu -24 152 23 357 141 103 0 chr2 99146734 99146812 -151541042 + L1MDa LINE L1 5365 5450 -1090 532 230 42 4 chr2 99146813 99147049 -151540805 + L1MD2 LINE L1 6034 6330 -29 195 129 0 0 chr2 99147058 99147089 -151540765 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 3485 241 78 65 chr2 99147091 99147704 -151540150 + L1M2 LINE L1 1635 2239 -3976 2685 156 26 2 chr2 99147704 99148126 -151539728 + MSTB1 LTR MaLR 1 432 0 3485 241 78 65 chr2 99148126 99149697 -151538157 + L1M2 LINE L1 2239 3815 -2400 4454 97 17 62 chr2 99149755 99150505 -151537349 + SVA Other Other 719 1437 0 255 254 59 34 chr2 99151209 99151327 -151536527 + Charlie7 DNA MER1_type 1 121 -2491 1782 271 75 29 chr2 99151342 99152024 -151535830 + L1MA8 LINE L1 466 1178 -6311 * 5379 221 55 29 chr2 99151992 99154398 -151533456 + L1MA8 LINE L1 1887 4361 -3204 5122 120 26 28 chr2 99154387 99155220 -151532634 + L1PB3 LINE L1 5323 6154 0 * 711 158 12 48 chr2 99155235 99155400 -151532454 + L1MA8 LINE L1 4334 4492 -3073 12386 145 32 13 chr2 99155408 99155757 -151532097 + L1MA8 LINE L1 4555 4896 -2814 2355 104 0 0 chr2 99155757 99156054 -151531800 + AluSx SINE Alu 1 297 -15 12386 145 32 13 chr2 99156054 99158805 -151529049 + L1MA8 LINE L1 4896 7706 -4 343 221 0 26 chr2 99158869 99158946 -151528908 + Charlie7 DNA MER1_type 2534 2608 -4 301 220 62 26 chr2 99159293 99159387 -151528467 + L1ME4a LINE L1 5720 5815 -351 396 0 0 0 chr2 99159464 99159508 -151528346 + (TA)n Simple_repeat Simple_repeat 1 44 0 306 216 12 80 chr2 99159509 99159644 -151528210 + L1ME4a LINE L1 5967 6092 -29 2345 91 0 0 chr2 99159644 99159962 -151527892 - AluSg SINE Alu 0 318 1 306 216 12 80 chr2 99159962 99159987 -151527867 + L1ME4a LINE L1 6092 6117 -4 846 261 30 20 chr2 99160679 99160882 -151526972 - MIR SINE MIR -37 225 21 244 304 88 39 chr2 99160933 99161127 -151526727 - MIR SINE MIR -56 206 1 1590 116 69 96 chr2 99161278 99161581 -151526273 + AluJo SINE Alu 1 295 -17 26 0 0 0 chr2 99162480 99162506 -151525348 + AT_rich Low_complexity Low_complexity 1 26 0 204 332 116 66 chr2 99162873 99163132 -151524722 + L2 LINE L2 3000 3271 -1 2118 87 0 81 chr2 99163245 99163566 -151524288 + AluSx SINE Alu 1 295 -17 193 227 136 15 chr2 99164801 99164867 -151522987 + MIR SINE MIR 93 166 -96 752 274 56 0 chr2 99167870 99168085 -151519769 - MIR SINE MIR -34 228 2 2322 97 7 0 chr2 99168266 99168566 -151519288 + AluSq SINE Alu 1 302 -11 2227 96 10 3 chr2 99169316 99169617 -151518237 + AluSg SINE Alu 1 303 -7 21 36 0 0 chr2 99169708 99169736 -151518118 + AT_rich Low_complexity Low_complexity 1 28 0 283 261 70 0 chr2 99169779 99169894 -151517960 + L1ME LINE L1 5700 5822 -299 305 250 0 25 chr2 99170026 99170106 -151517748 - MLT1I LTR MaLR -261 148 71 279 0 0 0 chr2 99170350 99170381 -151517473 + (CA)n Simple_repeat Simple_repeat 1 31 0 2127 106 0 0 chr2 99170411 99170704 -151517150 + AluSx SINE Alu 1 293 -19 1762 124 11 14 chr2 99171040 99171322 -151516532 + THE1A LTR MaLR 1 281 -74 1777 199 86 30 chr2 99171513 99171946 -151515908 + MSTB2 LTR MaLR 1 457 0 2229 143 48 84 chr2 99172736 99173178 -151514676 + MSTA LTR MaLR 1 426 -2 9755 160 9 21 chr2 99173180 99174530 -151513324 + MSTA-int LTR MaLR 1 1328 -323 17976 35 1 2 chr2 99174530 99177424 -151510430 - L1PA5 LINE L1 -14 6140 3259 9755 160 9 21 chr2 99177424 99177745 -151510109 + MSTA-int LTR MaLR 1327 1651 0 2309 131 54 56 chr2 99177745 99178174 -151509680 + MSTA LTR MaLR 1 428 0 1874 193 11 6 chr2 99178246 99178609 -151509245 + MLT1A1 LTR MaLR 1 365 0 2823 169 192 9 chr2 99178662 99179319 -151508535 + L1 LINE L1 4161 4937 -1209 623 259 44 6 chr2 99179458 99179616 -151508238 - MLT1J1 LTR MaLR -282 164 1 1135 194 149 16 chr2 99180199 99180575 -151507279 - LTR37A LTR ERV1 0 426 1 421 243 36 0 chr2 99180862 99180973 -151506881 + L1MD2 LINE L1 6243 6357 -2 459 197 99 40 chr2 99181323 99181475 -151506379 + L1MD2 LINE L1 6199 6359 0 2234 122 0 0 chr2 99182714 99183025 -151504829 + AluSx SINE Alu 2 312 0 1984 145 6 22 chr2 99183208 99183525 -151504329 - AluSx SINE Alu 0 312 1 249 202 225 58 chr2 99183536 99183709 -151504145 + L1ME4a LINE L1 5713 5914 -207 377 173 120 45 chr2 99183716 99183849 -151504005 + L1ME4a LINE L1 5977 6119 -2 2289 103 7 0 chr2 99183932 99184232 -151503622 - AluSg SINE Alu -8 302 1 2201 114 3 0 chr2 99184597 99184895 -151502959 + AluSx SINE Alu 1 299 -13 2174 102 7 3 chr2 99186547 99186840 -151501014 + AluSq SINE Alu 1 294 -19 539 119 28 42 chr2 99186884 99187027 -151500827 + GA-rich Low_complexity Low_complexity 4 144 0 2332 67 10 42 chr2 99187053 99187365 -151500489 - AluY SINE Alu -9 302 1 2876 258 50 19 chr2 99187527 99188472 -151499382 + L1M4 LINE L1 2849 3858 -2288 2778 167 43 4 chr2 99188472 99188940 -151498914 - MER66B LTR ERV1 0 486 1 2876 258 50 19 chr2 99188940 99189115 -151498739 + L1M4 LINE L1 3858 4026 -2120 1001 94 0 36 chr2 99189115 99189253 -151498601 + AluSq/x SINE Alu 1 133 -179 2958 218 34 31 chr2 99189266 99190001 -151497853 + L1M4 LINE L1 4013 4753 -1393 7593 39 0 0 chr2 99190001 99191520 -151496334 + L1PA3 LINE L1 4635 6153 -2 2958 218 34 31 chr2 99191520 99191600 -151496254 + L1M4 LINE L1 4753 4831 -1315 696 164 0 0 chr2 99192018 99192122 -151495732 - MER50 LTR ERV1 0 734 631 1329 140 14 0 chr2 99192208 99192429 -151495425 + L1MB7 LINE L1 5945 6168 -16 1918 205 47 11 chr2 99193757 99194205 -151493649 - MLT1C LTR MaLR 0 467 4 1771 193 38 63 chr2 99194446 99194953 -151492901 - Charlie4a DNA MER1_type -1 507 14 21 36 0 0 chr2 99195639 99195667 -151492187 + AT_rich Low_complexity Low_complexity 1 28 0 2234 80 3 10 chr2 99195670 99195989 -151491865 + AluSp SINE Alu 1 317 0 330 339 8 0 chr2 99196383 99196501 -151491353 + MIR SINE MIR 24 142 -66 480 229 110 8 chr2 99197149 99197267 -151490587 + FLAM_A SINE Alu 2 131 -2 387 265 15 8 chr2 99198184 99198316 -151489538 - L1MDa LINE L1 -3694 2846 2714 4353 80 2 16 chr2 99198338 99198900 -151488954 - MER41A LTR ERV1 0 554 1 13186 151 72 78 chr2 99198900 99199747 -151488107 - MER41A-int LTR ERV1 -2 5944 5093 1785 124 4 29 chr2 99199747 99200022 -151487832 - AluSx SINE Alu -17 295 28 13186 151 72 78 chr2 99200022 99200802 -151487052 - MER41A-int LTR ERV1 -853 5093 4310 2213 125 0 0 chr2 99200802 99201099 -151486755 + AluSq SINE Alu 1 297 -16 13186 151 72 78 chr2 99201099 99202769 -151485085 - MER41A-int LTR ERV1 -1636 4310 2667 251 148 56 0 chr2 99202770 99202824 -151485030 - MER41A-int LTR ERV1 -3731 2215 2159 * 795 113 144 10 chr2 99202792 99202947 -151484907 - MER41A-int LTR ERV1 -3929 2017 1503 * 7046 173 96 68 chr2 99202934 99204013 -151483841 - MER41A-int LTR ERV1 -4171 1775 727 2216 105 3 0 chr2 99204013 99204308 -151483546 + AluSp SINE Alu 1 296 -17 7046 173 96 68 chr2 99204308 99204385 -151483469 - MER41A-int LTR ERV1 -5219 727 654 1158 85 0 0 chr2 99204385 99204562 -151483292 + (GGAAA)n Simple_repeat Simple_repeat 1 177 0 234 0 0 0 chr2 99204562 99204588 -151483266 + (CAAGG)n Simple_repeat Simple_repeat 1 26 0 2299 79 17 0 chr2 99204588 99204880 -151482974 + AluSp SINE Alu 9 305 -8 7046 173 96 68 chr2 99204880 99205447 -151482407 - MER41A-int LTR ERV1 -5291 655 1 4651 56 0 0 chr2 99205619 99206173 -151481681 - MER41A LTR ERV1 0 554 1 1594 199 112 29 chr2 99206173 99206585 -151481269 + MLT1C LTR MaLR 22 467 0 499 127 30 30 chr2 99206620 99206754 -151481100 - L1MDa LINE L1 -4014 2526 2393 1999 96 87 9 chr2 99206771 99207136 -151480718 + LTR7 LTR ERV1 1 450 0 262 191 73 0 chr2 99207155 99207223 -151480631 + HERVH LTR ERV1 17 89 -7624 868 119 10 26 chr2 99207224 99207393 -151480461 + LTR7 LTR ERV1 1 218 -232 866 159 0 20 chr2 99207627 99207778 -151480076 + LTR7 LTR ERV1 303 450 0 2994 172 70 56 chr2 99207850 99208631 -151479223 - L1MDa LINE L1 -4309 2231 1440 2156 108 16 7 chr2 99208638 99208945 -151478909 - MER4A LTR ERV1 0 664 355 2582 82 0 38 chr2 99208992 99209359 -151478495 - MER4A LTR ERV1 -311 353 1 3022 223 82 13 chr2 99209360 99210539 -151477315 - L1MDa LINE L1 -5104 1436 16 2251 117 0 3 chr2 99210545 99210845 -151477009 - AluSg SINE Alu -11 299 1 21 0 0 0 chr2 99210948 99210969 -151476885 + AT_rich Low_complexity Low_complexity 1 21 0 264 270 95 7 chr2 99210995 99211132 -151476722 - LTR16C LTR ERVL 0 491 343 745 211 48 36 chr2 99211227 99211393 -151476461 + MER45A DNA AcHobo 10 177 -1 1794 205 48 31 chr2 99211492 99211946 -151475908 + MLT1C LTR MaLR 6 467 0 4471 129 14 17 chr2 99212533 99213246 -151474608 - MER50 LTR ERV1 -23 711 1 2428 89 0 0 chr2 99213509 99213812 -151474042 + AluSx SINE Alu 1 303 -9 218 309 127 0 chr2 99214082 99214192 -151473662 - MIR SINE MIR -81 181 58 961 239 72 8 chr2 99214311 99214562 -151473292 + MER45C DNA AcHobo 1 267 -686 420 246 175 64 chr2 99214613 99214784 -151473070 + MER45C DNA AcHobo 764 953 0 684 273 12 0 chr2 99215885 99216057 -151471797 + L1MB7 LINE L1 6001 6174 -10 348 161 0 0 chr2 99216085 99216147 -151471707 + (TA)n Simple_repeat Simple_repeat 1 62 0 1214 166 105 44 chr2 99216212 99216507 -151471347 - L1ME2 LINE L1 -2 6162 5850 2377 85 3 0 chr2 99216697 99216991 -151470863 + AluSp SINE Alu 2 296 -17 2887 86 25 93 chr2 99217223 99217748 -151470106 + LTR21A LTR ERV1 1 489 -16 4600 91 24 18 chr2 99217900 99218560 -151469294 - MER4A LTR ERV1 0 664 1 219 157 0 20 chr2 99218622 99218634 -151469220 + (TTAA)n Simple_repeat Simple_repeat 1 12 -38 2201 100 0 0 chr2 99218634 99218915 -151468939 + AluSx SINE Alu 1 281 -31 219 157 0 20 chr2 99218915 99218953 -151468901 + (TTAA)n Simple_repeat Simple_repeat 12 50 0 2010 189 49 20 chr2 99219677 99220127 -151467727 + MLT1C LTR MaLR 4 466 -1 2928 186 14 7 chr2 99220133 99220656 -151467198 + MLT2B3 LTR ERVL 1 419 -34 667 74 9 9 chr2 99220640 99220748 -151467106 + (TCTA)n Simple_repeat Simple_repeat 3 110 0 * 345 121 0 35 chr2 99220749 99220807 -151467047 + MLT2B3 LTR ERVL 499 554 0 2548 93 130 8 chr2 99220877 99221276 -151466578 + LTR7 LTR ERV1 1 448 -2 24 32 0 0 chr2 99221346 99221377 -151466477 + AT_rich Low_complexity Low_complexity 1 31 0 580 246 35 0 chr2 99221479 99221621 -151466233 - MLT1F LTR MaLR -44 498 352 415 234 166 23 chr2 99221870 99222008 -151465846 - MIR SINE MIR -33 229 60 2076 232 62 14 chr2 99222008 99222525 -151465329 + MLT1F LTR MaLR 1 542 0 415 234 166 23 chr2 99222525 99222561 -151465293 - MIR SINE MIR -202 60 30 205 265 61 0 chr2 99223176 99223225 -151464629 - L2 LINE L2 -16 3256 3205 439 252 5 79 chr2 99224411 99224625 -151463229 + HsTC2 DNA Tc2 27 224 -1674 1119 138 0 0 chr2 99224687 99224847 -151463007 + FRAM SINE Alu 1 160 -6 508 156 0 0 chr2 99225824 99225901 -151461953 + FLAM_A SINE Alu 1 77 -55 306 316 15 44 chr2 99226095 99226231 -151461623 + L1MD2 LINE L1 989 1120 -4999 641 267 120 65 chr2 99226252 99226848 -151461006 + L1MD2 LINE L1 1227 1789 -4340 1478 183 14 38 chr2 99226848 99227137 -151460717 + AluJo SINE Alu 1 282 -30 641 267 120 65 chr2 99227137 99227722 -151460132 + L1MD2 LINE L1 1789 2432 -3697 * 908 296 76 13 chr2 99227713 99228332 -151459522 + L1MD2 LINE L1 2859 3516 -2613 1493 134 158 0 chr2 99228472 99228718 -151459136 - AluSx SINE Alu -17 285 1 2247 129 12 6 chr2 99228750 99229084 -151458770 - MER1B DNA MER1_type 0 337 2 373 279 22 22 chr2 99229087 99229223 -151458631 - MER93a LTR ERV1 -204 198 63 194 273 65 0 chr2 99229700 99229777 -151458077 - L2 LINE L2 -304 2968 2887 758 165 26 88 chr2 99229962 99230086 -151457768 + MER3 DNA MER1_type 1 110 -99 2229 113 0 0 chr2 99230086 99230377 -151457477 - AluSx SINE Alu -21 291 1 758 165 26 88 chr2 99230377 99230446 -151457408 + MER3 DNA MER1_type 110 182 -27 255 317 108 17 chr2 99230541 99230661 -151457193 - L2 LINE L2 -3 3310 3180 1539 222 32 38 chr2 99231302 99231771 -151456083 + MLT1C LTR MaLR 2 467 0 21 36 0 0 chr2 99232294 99232322 -151455532 + AT_rich Low_complexity Low_complexity 1 28 0 378 234 153 0 chr2 99232478 99232589 -151455265 + MIR SINE MIR 115 242 -20 267 307 26 33 chr2 99232608 99232761 -151455093 - L3 LINE CR1 -75 1502 1351 2249 104 0 0 chr2 99232792 99233089 -151454765 + AluY SINE Alu 1 297 -14 579 192 0 8 chr2 99233200 99233325 -151454529 + L1MD2 LINE L1 4516 4639 -1490 * 1343 198 6 9 chr2 99233321 99233644 -151454210 + L1MD2 LINE L1 4867 5188 -941 1036 166 5 10 chr2 99233646 99233839 -151454015 + L1MD2 LINE L1 5685 5876 -466 2139 96 0 0 chr2 99233839 99234110 -151453744 + AluSp SINE Alu 1 271 -42 2911 204 96 26 chr2 99234221 99235255 -151452599 - L1M4 LINE L1 -758 6090 4985 378 103 35 46 chr2 99235411 99235498 -151452356 + L1MB7 LINE L1 6081 6166 -18 359 200 32 48 chr2 99235691 99235816 -151452038 + L1MC4 LINE L1 7914 8036 -6 2301 258 68 24 chr2 99236271 99237336 -151450518 + L1M4 LINE L1 3112 4223 -1923 554 139 0 0 chr2 99237447 99237526 -151450328 - AluS SINE Alu -233 79 1 488 271 12 29 chr2 99237552 99237796 -151450058 - L1M4 LINE L1 -4177 2673 2434 244 352 30 100 chr2 99237929 99238298 -151449556 + L2 LINE L2 2898 3240 -32 932 279 24 4 chr2 99238429 99238683 -151449171 + MIR SINE MIR 1 259 -3 322 267 106 25 chr2 99239264 99239425 -151448429 + L3 LINE CR1 886 1059 -518 517 259 87 30 chr2 99240148 99240488 -151447366 + L1MEd LINE L1 916 1369 -1121 380 235 201 68 chr2 99240591 99240964 -151446890 - L1M4 LINE L1 -5510 1339 722 231 113 0 113 chr2 99241836 99241889 -151445965 + MIR3 SINE MIR 113 159 -49 280 349 19 9 chr2 99241911 99242017 -151445837 + MER5A DNA MER1_type 65 171 -18 24 53 0 0 chr2 99242158 99242196 -151445658 + AT_rich Low_complexity Low_complexity 1 38 0 2441 61 7 0 chr2 99242965 99243260 -151444594 - AluSp SINE Alu -1 312 16 324 0 0 0 chr2 99243497 99243533 -151444321 + (T)n Simple_repeat Simple_repeat 1 36 0 2357 217 65 25 chr2 99243536 99244187 -151443667 - L1ME1 LINE L1 -50 6185 5509 12168 115 30 109 chr2 99244187 99245912 -151441942 + Tigger1 DNA MER2_type 1 1860 -558 1151 182 82 0 chr2 99245912 99246132 -151441722 + AluJb SINE Alu 33 270 -42 12168 115 30 109 chr2 99246132 99246466 -151441388 + Tigger1 DNA MER2_type 1860 2047 -371 2125 113 0 3 chr2 99246466 99246758 -151441096 - AluSg SINE Alu -19 291 1 12168 115 30 109 chr2 99246758 99247103 -151440751 + Tigger1 DNA MER2_type 2047 2418 0 6172 214 81 24 chr2 99247104 99248671 -151439183 - L1ME1 LINE L1 -726 5509 3546 180 0 0 0 chr2 99248671 99248691 -151439163 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 6172 214 81 24 chr2 99248691 99249668 -151438186 - L1ME1 LINE L1 -2689 3546 2627 4438 246 78 20 chr2 99249682 99250142 -151437712 - L1ME1 LINE L1 -4641 1755 1323 216 0 0 0 chr2 99250142 99250166 -151437688 + (TCC)n Simple_repeat Simple_repeat 1 24 0 4438 246 78 20 chr2 99250166 99251295 -151436559 - L1ME1 LINE L1 -5073 1323 74 1669 157 35 155 chr2 99251428 99252002 -151435852 - MLT1D LTR MaLR 0 505 1 336 48 0 0 chr2 99252036 99252078 -151435776 + (CCTG)n Simple_repeat Simple_repeat 2 43 0 305 61 0 20 chr2 99252078 99252127 -151435727 + (TCCC)n Simple_repeat Simple_repeat 1 48 0 256 191 0 48 chr2 99252147 99252210 -151435644 - AluSx SINE Alu 0 302 243 553 272 31 6 chr2 99252221 99252383 -151435471 - L1MEc LINE L1 -5715 681 516 1827 111 4 0 chr2 99252392 99252636 -151435218 - AluSx SINE Alu -64 248 4 1220 147 0 0 chr2 99252677 99252854 -151435000 - AluJb SINE Alu -4 308 132 239 245 202 21 chr2 99254004 99254098 -151433756 + MIR SINE MIR 66 176 -86 180 0 0 0 chr2 99254562 99254582 -151433272 + (GAATG)n Simple_repeat Simple_repeat 1 20 0 1614 184 7 20 chr2 99255459 99255764 -151432090 - AluJo SINE Alu -11 301 1 26 0 0 0 chr2 99256240 99256266 -151431588 + AT_rich Low_complexity Low_complexity 1 26 0 353 255 32 0 chr2 99256748 99256842 -151431012 + MIR SINE MIR 58 154 -108 252 0 0 0 chr2 99257515 99257543 -151430311 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 467 242 204 5 chr2 99257695 99257881 -151429973 + MIR SINE MIR 40 262 0 264 330 70 0 chr2 99258000 99258100 -151429754 - L2 LINE L2 -10 3262 3156 4551 83 0 0 chr2 99259057 99259644 -151428210 - LTR14C LTR ERVK 0 587 1 244 291 39 19 chr2 99259778 99259881 -151427973 + MIR SINE MIR 153 257 -5 2105 131 0 3 chr2 99260834 99261132 -151426722 - AluSq SINE Alu -16 297 1 1965 221 133 24 chr2 99261393 99262052 -151425802 - L1ME1 LINE L1 -7 6553 5823 2397 65 0 3 chr2 99262052 99262342 -151425512 - AluY SINE Alu -21 290 2 1483 227 124 108 chr2 99262343 99263999 -151423855 - L1ME1 LINE L1 -943 5597 3916 * 2201 259 88 19 chr2 99263990 99264973 -151422881 + L1MC4 LINE L1 6841 7890 -152 218 250 0 0 chr2 99264977 99265021 -151422833 + (CA)n Simple_repeat Simple_repeat 1 44 0 400 266 35 75 chr2 99265921 99266094 -151421760 - MER5A DNA MER1_type -18 171 6 253 216 0 0 chr2 99266244 99266305 -151421549 + MIR SINE MIR 45 105 -103 25 31 0 0 chr2 99267201 99267233 -151420621 + AT_rich Low_complexity Low_complexity 1 32 0 2321 74 7 0 chr2 99267451 99267747 -151420107 - AluSx SINE Alu -14 298 1 22 0 0 0 chr2 99267903 99267925 -151419929 + AT_rich Low_complexity Low_complexity 1 22 0 4977 245 65 58 chr2 99268251 99269726 -151418128 - L1M4 LINE L1 -1196 4950 3446 2456 79 0 9 chr2 99269726 99270041 -151417813 - AluSq SINE Alu -1 312 1 4977 245 65 58 chr2 99270041 99271289 -151416565 - L1M4 LINE L1 -2700 3446 2208 1578 205 126 79 chr2 99271289 99271653 -151416201 - L1ME1 LINE L1 -4275 2265 1920 1878 152 3 25 chr2 99271653 99271969 -151415885 - AluJb SINE Alu -3 309 1 1578 205 126 79 chr2 99271969 99272389 -151415465 - L1ME1 LINE L1 -4620 1920 1437 2431 77 0 0 chr2 99272389 99272687 -151415167 - AluSg SINE Alu -12 298 1 1578 205 126 79 chr2 99272687 99272732 -151415122 - L1ME1 LINE L1 -5103 1437 1396 378 196 43 169 chr2 99272742 99272997 -151414857 + L1MDa LINE L1 116 338 -6202 578 293 0 24 chr2 99273153 99273361 -151414493 + L1MDa LINE L1 800 1002 -5541 23 0 0 0 chr2 99273912 99273935 -151413919 + AT_rich Low_complexity Low_complexity 1 23 0 2336 65 10 23 chr2 99274724 99275031 -151412823 - AluY SINE Alu -8 303 1 2270 229 58 30 chr2 99275050 99275607 -151412247 - L1ME1 LINE L1 -5 6161 5576 2523 68 0 0 chr2 99275607 99275915 -151411939 + AluY SINE Alu 1 308 -3 2270 229 58 30 chr2 99275915 99276122 -151411732 - L1ME1 LINE L1 -590 5576 5376 2300 116 0 0 chr2 99276338 99276769 -151411085 + AluSq SINE Alu 1 431 0 717 207 99 24 chr2 99276769 99276982 -151410872 - L2 LINE L2 -71 3242 3014 1721 172 3 3 chr2 99277376 99277666 -151410188 + AluJo SINE Alu 3 292 -20 335 198 49 25 chr2 99277817 99277898 -151409956 - MIR SINE MIR -135 127 45 1601 193 94 39 chr2 99277898 99278173 -151409681 + L1MD2 LINE L1 5854 6167 -192 261 0 0 0 chr2 99278173 99278202 -151409652 + (CA)n Simple_repeat Simple_repeat 2 30 0 1601 193 94 39 chr2 99278202 99278393 -151409461 + L1MD2 LINE L1 6167 6346 -13 1626 136 26 63 chr2 99278779 99279081 -151408773 + AluSg SINE Alu 1 291 -19 21 36 0 0 chr2 99279102 99279130 -151408724 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 99279791 99279812 -151408042 + AT_rich Low_complexity Low_complexity 1 21 0 1621 138 10 48 chr2 99280048 99280339 -151407515 + AluJb SINE Alu 22 301 -11 338 264 22 0 chr2 99280953 99281044 -151406810 + L2 LINE L2 3157 3249 -23 2144 110 0 0 chr2 99281044 99281325 -151406529 - AluSq SINE Alu -32 281 1 278 130 0 19 chr2 99281536 99281590 -151406264 + (TA)n Simple_repeat Simple_repeat 2 54 0 249 300 0 0 chr2 99281593 99281683 -151406171 + L1MC4 LINE L1 6614 6703 -1339 261 294 0 0 chr2 99281700 99281792 -151406062 + (TA)n Simple_repeat Simple_repeat 1 92 0 607 226 45 30 chr2 99282813 99283012 -151404842 - L1MC5 LINE L1 -71 7890 7689 1368 179 3 83 chr2 99283093 99283394 -151404460 + AluJo SINE Alu 1 277 -35 749 98 0 72 chr2 99283400 99283594 -151404260 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 524 264 62 23 chr2 99283878 99284229 -151403625 + MLT1I LTR MaLR 1 407 -2 222 226 193 18 chr2 99284506 99284599 -151403255 + MIR SINE MIR 41 144 -64 308 259 130 65 chr2 99284604 99284789 -151403065 - MIR SINE MIR -1 261 65 1080 95 80 20 chr2 99285068 99285268 -151402586 + L1MA8 LINE L1 6077 6288 -3 2335 104 3 16 chr2 99285471 99285788 -151402066 - AluSq SINE Alu 0 313 1 761 297 52 101 chr2 99287409 99288113 -151399741 - L2 LINE L2 0 3313 2653 919 228 263 5 chr2 99288542 99288933 -151398921 - L2 LINE L2 -663 2651 2160 490 235 182 27 chr2 99289107 99289294 -151398560 - MIR SINE MIR -18 244 29 967 210 16 0 chr2 99289401 99289587 -151398267 - MER5A DNA MER1_type 0 189 1 742 216 0 22 chr2 99289950 99290131 -151397723 - MER69A DNA AcHobo 0 177 1 2059 85 32 4 chr2 99290534 99290815 -151397039 - AluSq SINE Alu -24 289 1 29 28 0 0 chr2 99290850 99290886 -151396968 + AT_rich Low_complexity Low_complexity 1 36 0 410 153 0 15 chr2 99291237 99291487 -151396367 + AluJo SINE Alu 1 312 0 361 333 138 42 chr2 99292234 99292691 -151395163 + L1M2 LINE L1 899 1399 -5450 180 233 186 23 chr2 99294158 99294244 -151393610 + L2 LINE L2 3171 3270 -2 23 0 0 0 chr2 99295459 99295482 -151392372 + AT_rich Low_complexity Low_complexity 1 23 0 446 300 8 8 chr2 99297755 99297885 -151389969 - MIR SINE MIR -117 145 16 21 36 0 0 chr2 99298661 99298689 -151389165 + AT_rich Low_complexity Low_complexity 1 28 0 1681 121 74 53 chr2 99298698 99299037 -151388817 - L1MB2 LINE L1 -12 6159 5814 3947 183 65 1 chr2 99299235 99299563 -151388291 - L1MB2 LINE L1 -345 5826 5520 180 0 0 0 chr2 99299563 99299583 -151388271 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 3947 183 65 1 chr2 99299583 99300607 -151387247 - L1MB2 LINE L1 -651 5520 4383 2246 103 27 0 chr2 99300792 99301093 -151386761 - AluSc SINE Alu 0 309 1 286 255 88 47 chr2 99303057 99303249 -151384605 - L1MB2 LINE L1 -1995 4151 3952 32 57 0 0 chr2 99303578 99303631 -151384223 + AT_rich Low_complexity Low_complexity 1 53 0 1432 114 110 39 chr2 99303631 99303939 -151383915 + MSTB1 LTR MaLR 103 432 0 21 36 0 0 chr2 99303952 99303980 -151383874 + AT_rich Low_complexity Low_complexity 1 28 0 228 217 67 0 chr2 99304148 99304208 -151383646 + L1MB8 LINE L1 4773 4836 -1310 540 158 40 10 chr2 99304213 99304314 -151383540 + MER68 LTR ERV1 168 271 -291 406 224 28 19 chr2 99304318 99304425 -151383429 - MLT1D LTR MaLR 0 505 398 251 224 0 0 chr2 99304426 99304475 -151383379 - LTR3b LTR ERVK 0 500 452 1875 122 51 6 chr2 99304481 99304793 -151383061 - LTR3b LTR ERVK -17 483 158 351 118 0 0 chr2 99304812 99304863 -151382991 - HERVK14 LTR ERVK -61 5884 5834 715 75 3 11 chr2 99304917 99305023 -151382831 + MER4D LTR ERV1 57 165 -453 1908 126 17 62 chr2 99305023 99305381 -151382473 - LTR3b LTR ERVK 0 500 159 1039 193 67 13 chr2 99305395 99305722 -151382132 - MLT1D LTR MaLR -106 378 1 2965 189 102 26 chr2 99305743 99306713 -151381141 + L1MB8 LINE L1 5088 6131 -47 1329 249 69 22 chr2 99306779 99307241 -151380613 + L1MC4a LINE L1 5435 5918 -1890 342 0 0 0 chr2 99307256 99307294 -151380560 + (T)n Simple_repeat Simple_repeat 1 38 0 366 294 130 43 chr2 99307313 99307636 -151380218 - L1MD2 LINE L1 -239 6120 5770 2679 213 55 35 chr2 99307750 99308967 -151378887 - L1MB7 LINE L1 -163 6519 5262 2294 108 0 0 chr2 99308967 99309273 -151378581 - AluSc SINE Alu -3 306 1 2679 213 55 35 chr2 99309273 99309606 -151378248 - L1MB7 LINE L1 -1420 5262 4937 887 235 53 94 chr2 99309605 99309819 -151378035 - L1MB7 LINE L1 -2346 4298 4077 * 1470 195 66 0 chr2 99309819 99309972 -151377882 - AluJo SINE Alu -22 290 149 869 63 0 35 chr2 99309972 99310114 -151377740 + (TTTC)n Simple_repeat Simple_repeat 2 138 0 1470 195 66 0 chr2 99310114 99310232 -151377622 - AluJo SINE Alu -163 149 1 887 235 53 94 chr2 99310232 99310507 -151377347 - L1MB7 LINE L1 -2567 4077 3829 26932 52 5 1 chr2 99310585 99312238 -151375616 - L1PA5 LINE L1 -1 6153 4508 2440 77 0 3 chr2 99312238 99312548 -151375306 - AluY SINE Alu -2 309 1 26932 52 5 1 chr2 99312548 99315273 -151372581 - L1PA5 LINE L1 -1646 4508 1758 631 266 26 0 chr2 99315262 99315495 -151372359 - L1MB7 LINE L1 -3553 3091 2853 * 25 0 0 0 chr2 99315496 99315521 -151372333 + AT_rich Low_complexity Low_complexity 1 25 0 1839 172 120 0 chr2 99315581 99316064 -151371790 - L1MB7 LINE L1 -4958 1584 1044 4257 221 64 43 chr2 99316077 99317398 -151370456 - L1M4 LINE L1 -5194 1348 1 23 54 0 0 chr2 99317510 99317547 -151370307 + AT_rich Low_complexity Low_complexity 1 37 0 610 208 0 0 chr2 99317658 99317788 -151370066 - L1MD1 LINE L1 -22 6220 6091 384 157 0 9 chr2 99317829 99317922 -151369932 - L1P4 LINE L1 -728 5438 5349 * 3793 241 64 25 chr2 99317919 99319449 -151368405 - L1M4 LINE L1 -866 5280 3692 1666 175 92 5 chr2 99319454 99319854 -151368000 - L1MB4 LINE L1 -13 6167 5733 566 179 31 68 chr2 99319837 99319878 -151367976 - L1MDb LINE L1 -5466 943 902 * 1811 140 78 3 chr2 99319878 99320200 -151367654 - MER7A DNA MER2_type -2 344 1 566 179 31 68 chr2 99320200 99320320 -151367534 - L1MDb LINE L1 -5507 902 788 668 155 0 0 chr2 99320915 99321018 -151366836 - AluSg/x SINE Alu -12 297 195 226 244 12 116 chr2 99321335 99321421 -151366433 - MIR3 SINE MIR -28 180 104 232 270 248 7 chr2 99322026 99322163 -151365691 + MIR SINE MIR 18 187 -75 24 77 0 0 chr2 99322629 99322681 -151365173 + AT_rich Low_complexity Low_complexity 1 52 0 5984 182 90 9 chr2 99323682 99325054 -151362800 - L1MC3 LINE L1 -709 7076 5595 22 35 0 0 chr2 99325484 99325513 -151362341 + AT_rich Low_complexity Low_complexity 1 29 0 2372 70 0 10 chr2 99326944 99327245 -151360609 - AluY SINE Alu -13 298 1 23 0 0 0 chr2 99327295 99327318 -151360536 + AT_rich Low_complexity Low_complexity 1 23 0 1760 168 28 0 chr2 99327906 99328191 -151359663 + AluJb SINE Alu 5 297 -15 298 270 14 0 chr2 99328352 99328426 -151359428 - MER5B DNA MER1_type -7 171 97 1758 168 11 4 chr2 99328691 99328971 -151358883 - AluJb SINE Alu -30 282 1 2219 77 28 0 chr2 99328982 99329267 -151358587 - AluY SINE Alu -18 293 1 1877 170 3 22 chr2 99329420 99329732 -151358122 - AluJb SINE Alu -5 307 2 2025 132 33 7 chr2 99329763 99330066 -151357788 - AluSx SINE Alu 0 312 2 1304 214 93 94 chr2 99330237 99330722 -151357132 - L1ME3A LINE L1 -88 6082 5597 2123 115 21 27 chr2 99330722 99331060 -151356794 + MER1B DNA MER1_type 2 337 0 1304 214 93 94 chr2 99331060 99331404 -151356450 - L1ME3A LINE L1 -573 5597 5254 491 305 78 24 chr2 99331459 99331793 -151356061 - L1ME3A LINE L1 -891 5255 4904 257 213 13 13 chr2 99331980 99332055 -151355799 + FRAM SINE Alu 64 138 -28 4059 206 81 7 chr2 99332105 99333175 -151354679 + L1MD2 LINE L1 5190 6334 -25 365 222 83 62 chr2 99334131 99334275 -151353579 - MER20 DNA MER1_type -9 210 64 787 104 9 0 chr2 99334679 99334794 -151353060 + L1PA7 LINE L1 6034 6149 -5 702 237 140 55 chr2 99334798 99335034 -151352820 + L1M4 LINE L1 4901 5116 -1050 1814 167 3 17 chr2 99335034 99335333 -151352521 + AluJb SINE Alu 1 295 -17 702 237 140 55 chr2 99335333 99335588 -151352266 + L1M4 LINE L1 5116 5428 -738 384 280 37 19 chr2 99335811 99335918 -151351936 + MER5A DNA MER1_type 59 167 -22 448 286 84 43 chr2 99336390 99336538 -151351316 - L1ME3A LINE L1 -1639 4507 4367 334 200 67 0 chr2 99336538 99336613 -151351241 + MER116 DNA Mariner 1 80 0 448 286 84 43 chr2 99336613 99336926 -151350928 - L1ME3A LINE L1 -1779 4367 4027 639 290 66 18 chr2 99336975 99337298 -151350556 - LTR16B LTR ERVL -2 462 52 374 296 94 21 chr2 99337352 99337382 -151350472 + L1MDa LINE L1 1688 1714 -4886 2184 122 3 0 chr2 99337382 99337676 -151350178 + AluSq SINE Alu 1 295 -18 374 296 94 21 chr2 99337676 99338031 -151349823 + L1MDa LINE L1 1714 2138 -4462 667 250 47 40 chr2 99338065 99338390 -151349464 + MLT1G3 LTR MaLR 100 421 -121 288 228 0 0 chr2 99338394 99338451 -151349403 + MLT1G3 LTR MaLR 537 593 -2 575 250 110 11 chr2 99338531 99338625 -151349229 - L1MC5 LINE L1 -385 7576 7493 228 35 0 0 chr2 99338625 99338654 -151349200 + (TTG)n Simple_repeat Simple_repeat 2 30 0 575 250 110 11 chr2 99338654 99338831 -151349023 - L1MC5 LINE L1 -468 7493 7278 440 236 89 100 chr2 99338835 99339006 -151348848 + MER21B LTR ERV1 8 176 -687 2306 104 10 0 chr2 99339006 99339314 -151348540 + AluSx SINE Alu 1 311 -1 440 236 89 100 chr2 99339314 99339422 -151348432 + MER21B LTR ERV1 176 284 -579 1923 92 27 14 chr2 99339458 99339753 -151348101 + THE1C LTR MaLR 77 375 0 823 239 77 10 chr2 99339930 99340139 -151347715 - MER58A DNA MER1_type 0 224 2 420 329 58 7 chr2 99340382 99340537 -151347317 - MIR SINE MIR -95 167 5 1810 145 14 17 chr2 99341035 99341331 -151346523 + AluSx SINE Alu 5 299 -13 421 137 82 109 chr2 99341402 99341585 -151346269 + L1M4 LINE L1 4964 5141 -1005 728 187 0 30 chr2 99341599 99341733 -151346121 + FLAM_C SINE Alu 1 130 -3 263 186 54 12 chr2 99342502 99342620 -151345234 - L1M LINE L1 -745 5406 5299 1866 239 29 52 chr2 99343395 99344015 -151343839 - L1ME1 LINE L1 -6 6160 5555 1376 101 26 3 chr2 99343987 99344275 -151343579 + L1ME1 LINE L1 4728 5540 -614 * 3032 163 21 11 chr2 99344270 99344897 -151342957 - L1MB3 LINE L1 -336 5847 5215 319 329 75 12 chr2 99344992 99345153 -151342701 - L1MC4 LINE L1 -72 7970 7800 419 293 93 41 chr2 99345385 99345671 -151342183 + L2 LINE L2 2751 3052 -261 1215 211 139 66 chr2 99347964 99348472 -151339382 - MLT1G3 LTR MaLR -16 514 1 730 145 15 14 chr2 99348574 99348720 -151339134 - MLT1A2 LTR MaLR 0 437 257 676 261 47 22 chr2 99349073 99349392 -151338462 + L1MEc LINE L1 1030 1299 -5085 1279 282 119 22 chr2 99349394 99350311 -151337543 + L1MEc LINE L1 1368 2525 -4038 1834 208 146 98 chr2 99350332 99350891 -151336963 - L1MC4 LINE L1 -1 8041 7510 1653 98 118 8 chr2 99350891 99351177 -151336677 + AluSx SINE Alu 1 314 0 1834 208 146 98 chr2 99351177 99351791 -151336063 - L1MC4 LINE L1 -532 7510 6927 2949 83 39 21 chr2 99351791 99352227 -151335627 - MLT2A1 LTR ERVL 0 444 1 1834 208 146 98 chr2 99352227 99352752 -151335102 - L1MC4 LINE L1 -1115 6927 6185 3775 142 20 22 chr2 99352760 99353443 -151334411 - L1MA4A LINE L1 -2 6301 5620 850 165 0 0 chr2 99353447 99353611 -151334243 + L1 LINE L1 4961 5124 -1022 584 270 11 0 chr2 99353637 99353826 -151334028 - L1MC4 LINE L1 -2025 5783 5593 2103 169 5 12 chr2 99353847 99354266 -151333588 + L1MA8 LINE L1 5363 5778 -513 689 187 98 42 chr2 99354522 99354736 -151333118 + L1MA8 LINE L1 5821 6046 -245 1521 179 131 11 chr2 99354741 99355092 -151332762 + MER47B DNA MER2_type 24 416 -2 925 121 79 0 chr2 99355093 99355258 -151332596 + L1MA8 LINE L1 6102 6279 -12 1252 223 56 23 chr2 99355279 99355674 -151332180 - L1MC4 LINE L1 -2147 5661 5254 849 257 288 7 chr2 99355722 99356291 -151331563 + L1M4 LINE L1 2234 2962 -3184 1304 204 38 46 chr2 99356291 99356659 -151331195 - MLT1B LTR MaLR -4 386 22 2382 274 131 7 chr2 99356694 99357857 -151329997 + L1M4 LINE L1 2953 4259 -1887 680 238 52 24 chr2 99357959 99358207 -151329647 + L1M4 LINE L1 4482 4736 -1410 17434 106 14 2 chr2 99358275 99361049 -151326805 + L1P LINE L1 2323 5130 -1016 926 248 199 47 chr2 99361748 99362310 -151325544 + L2 LINE L2 2301 2938 -334 315 256 26 0 chr2 99362653 99362731 -151325123 + L2 LINE L2 3190 3269 -3 231 155 83 0 chr2 99362871 99362955 -151324899 + (TA)n Simple_repeat Simple_repeat 1 91 0 22 94 0 0 chr2 99364745 99364809 -151323045 + AT_rich Low_complexity Low_complexity 1 64 0 1142 257 23 10 chr2 99364911 99365214 -151322640 + L1M2c LINE L1 734 1040 -5749 6671 183 32 59 chr2 99365217 99365554 -151322300 + L1M2c LINE L1 806 1151 -5637 711 158 0 0 chr2 99365554 99365681 -151322173 - ALR/Alpha Satellite centromeric -45 127 1 6671 183 32 59 chr2 99365681 99367010 -151320844 + L1M2c LINE L1 1151 2480 -4308 2265 35 42 11 chr2 99367010 99367293 -151320561 + AluY SINE Alu 1 292 -19 6671 183 32 59 chr2 99367293 99368592 -151319262 + L1M2c LINE L1 2480 3814 -2974 1421 203 85 15 chr2 99369247 99369587 -151318267 + MLT1A1 LTR MaLR 2 365 0 526 238 32 59 chr2 99369971 99370168 -151317686 - MLT1E3 LTR MaLR -348 306 54 470 241 57 21 chr2 99370174 99370315 -151317539 - MLT2F LTR ERVL -517 146 1 696 246 109 78 chr2 99370781 99370987 -151316867 + MLT1L LTR MaLR 69 267 -348 1414 158 121 11 chr2 99370987 99371252 -151316602 + AluSg SINE Alu 1 294 -16 696 246 109 78 chr2 99371252 99371496 -151316358 + MLT1L LTR MaLR 267 533 -82 237 280 140 98 chr2 99371842 99372221 -151315633 + L2 LINE L2 2395 2789 -525 340 261 65 33 chr2 99372440 99372530 -151315324 - L1MC4 LINE L1 -126 7916 7818 2172 136 80 29 chr2 99372530 99372943 -151314911 - Tigger2a DNA MER2_type 0 434 1 340 261 65 33 chr2 99372943 99373005 -151314849 - L1MC4 LINE L1 -224 7818 7759 315 255 52 121 chr2 99373029 99373319 -151314535 - MLT1K LTR MaLR 0 588 319 468 215 87 51 chr2 99373424 99373619 -151314235 - LTR52 LTR ERVL -16 405 204 29917 106 18 54 chr2 99373638 99380019 -151307835 - L1PA7 LINE L1 -3 6151 12 540 225 148 11 chr2 99380028 99380210 -151307644 - LTR52 LTR ERVL -208 213 7 254 299 0 15 chr2 99380423 99380490 -151307364 + CT-rich Low_complexity Low_complexity 5 70 0 2630 179 125 42 chr2 99380609 99381280 -151306574 - LTR8A LTR ERV1 0 727 1 1002 213 67 48 chr2 99382169 99382707 -151305147 + MLT1E3 LTR MaLR 1 624 0 919 230 24 43 chr2 99383984 99384171 -151303683 + L1MEc LINE L1 2179 2368 -3847 192 40 0 0 chr2 99384171 99384196 -151303658 + (TAGA)n Simple_repeat Simple_repeat 4 28 0 919 230 24 43 chr2 99384196 99384429 -151303425 + L1MEc LINE L1 2368 2560 -3655 1134 266 157 25 chr2 99384455 99385004 -151302850 + L1M4 LINE L1 18 638 -6221 4354 231 97 23 chr2 99385004 99385437 -151302417 + L1M4 LINE L1 3152 3551 -3406 1244 165 62 9 chr2 99385437 99385661 -151302193 + MER46A DNA MER2_type 1 236 0 4354 231 97 23 chr2 99385661 99386314 -151301540 + L1M4 LINE L1 3551 4154 -2803 2137 72 11 7 chr2 99386314 99386613 -151301241 + AluY SINE Alu 1 300 0 4354 231 97 23 chr2 99386613 99387205 -151300649 + L1M4 LINE L1 4154 4957 -2000 5814 135 30 6 chr2 99387962 99389178 -151298676 - L1MA3 LINE L1 0 7724 6481 11433 127 59 28 chr2 99389181 99391791 -151296063 - L1MA3 LINE L1 -4536 3029 19 541 255 102 6 chr2 99392497 99392654 -151295200 + MIR SINE MIR 2 173 -89 370 227 164 0 chr2 99392802 99392912 -151294942 + L2 LINE L2 3145 3272 0 1294 222 115 36 chr2 99393479 99393975 -151293879 - MLT1E2 LTR MaLR 0 626 92 650 289 57 25 chr2 99395087 99395367 -151292487 - MER102b DNA MER1_type 0 341 53 22 35 0 0 chr2 99396553 99396582 -151291272 + AT_rich Low_complexity Low_complexity 1 29 0 248 327 0 0 chr2 99396656 99396769 -151291085 + L1MC/D LINE L1 5792 5904 -1904 1962 137 3 10 chr2 99396774 99397073 -151290781 - AluSx SINE Alu -15 297 1 2016 260 131 39 chr2 99397344 99398061 -151289793 - L2 LINE L2 -4 3309 2659 14289 126 39 15 chr2 99398061 99398862 -151288992 - Tigger1 DNA MER2_type 0 2418 1638 2128 114 0 35 chr2 99398862 99399178 -151288676 - AluSx SINE Alu -7 305 1 14289 126 39 15 chr2 99399178 99400033 -151287821 - Tigger1 DNA MER2_type -780 1638 687 2245 110 20 0 chr2 99400033 99400334 -151287520 + AluSq SINE Alu 1 307 -6 14289 126 39 15 chr2 99400334 99401035 -151286819 - Tigger1 DNA MER2_type -1731 687 4 2016 260 131 39 chr2 99401035 99401405 -151286449 - L2 LINE L2 -654 2659 2125 593 52 0 0 chr2 99401821 99401898 -151285956 - L1PA11 LINE L1 0 6174 6098 280 250 13 0 chr2 99401898 99401974 -151285880 + HsTC2 DNA Tc2 29 105 -1793 189 0 0 0 chr2 99402363 99402384 -151285470 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 207 0 0 0 chr2 99402750 99402773 -151285081 + (A)n Simple_repeat Simple_repeat 1 23 0 213 278 28 0 chr2 99402784 99402856 -151284998 + (TA)n Simple_repeat Simple_repeat 2 75 0 339 207 49 0 chr2 99402867 99402949 -151284905 - L1ME1 LINE L1 -14 6152 6067 2556 234 85 29 chr2 99402971 99403786 -151284068 - L1MC3 LINE L1 -743 6198 5819 1429 155 48 82 chr2 99403786 99404140 -151283714 - MER2 DNA MER2_type 0 344 3 2556 234 85 29 chr2 99404140 99404577 -151283277 - L1MC3 LINE L1 -1122 5819 5408 758 205 112 28 chr2 99404602 99404851 -151283003 - L1MD3 LINE L1 -16 7979 7710 4018 249 67 28 chr2 99404851 99405294 -151282560 - L1MC3 LINE L1 -1540 5401 4977 2122 88 3 30 chr2 99405294 99405590 -151282264 - AluSc SINE Alu -21 288 1 4018 249 67 28 chr2 99405590 99405713 -151282141 - L1MC3 LINE L1 -1964 4977 4860 1244 102 112 0 chr2 99405713 99405919 -151281935 + MER30 DNA MER1_type 1 229 -1 4018 249 67 28 chr2 99405919 99407077 -151280777 - L1MC3 LINE L1 -2081 4860 3609 390 293 46 25 chr2 99407099 99407338 -151280516 - L1MC3 LINE L1 -6070 353 110 1887 174 0 13 chr2 99408851 99409155 -151278699 + AluJo SINE Alu 1 300 -12 339 316 18 11 chr2 99409237 99409361 -151278493 - MIR SINE MIR -85 123 1 207 240 131 46 chr2 99409795 99409970 -151277884 + L2 LINE L2 2512 2701 -613 367 252 43 35 chr2 99409997 99410112 -151277742 + L2 LINE L2 3180 3295 -18 887 205 0 24 chr2 99411881 99412047 -151275807 - FRAM SINE Alu -14 162 1 667 234 114 0 chr2 99412604 99412788 -151275066 + MER3 DNA MER1_type 5 209 0 450 0 0 0 chr2 99413128 99413178 -151274676 + (TTGG)n Simple_repeat Simple_repeat 2 51 0 1656 157 0 11 chr2 99413187 99413449 -151274405 - AluJb SINE Alu -53 259 1 2483 84 0 0 chr2 99413750 99414058 -151273796 + AluSg SINE Alu 3 310 0 22 56 0 0 chr2 99414175 99414211 -151273643 + AT_rich Low_complexity Low_complexity 1 36 0 1339 260 74 24 chr2 99414274 99414771 -151273083 + L1ME1 LINE L1 5640 6161 -5 540 220 57 18 chr2 99414792 99414979 -151272875 + Charlie4a DNA MER1_type 129 335 -173 388 173 142 37 chr2 99417348 99417510 -151270344 + MER104 DNA MER2_type 2 180 0 1965 149 0 26 chr2 99418527 99418835 -151269019 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr2 99420463 99420485 -151267369 + (T)n Simple_repeat Simple_repeat 1 22 0 2127 122 16 3 chr2 99420522 99420825 -151267029 + AluSx SINE Alu 1 307 -5 400 296 56 32 chr2 99421049 99421174 -151266680 - L2 LINE L2 0 3272 3145 * 700 277 18 22 chr2 99421170 99421394 -151266460 - L2 LINE L2 -508 2806 2584 216 0 0 0 chr2 99422333 99422357 -151265497 + (T)n Simple_repeat Simple_repeat 1 24 0 706 128 0 0 chr2 99422698 99422800 -151265054 - LTR12 LTR ERV1 0 714 613 307 190 51 0 chr2 99422800 99422879 -151264975 - LTR30 LTR ERV1 -79 643 561 1523 158 212 4 chr2 99422879 99423317 -151264537 - pTR5 LTR ERV1 -400 2038 1 5441 89 19 29 chr2 99423317 99424099 -151263755 - HERV17 LTR ERV1 0 8399 7626 251 125 0 0 chr2 99424097 99424137 -151263717 - HERV17 LTR ERV1 -5156 1740 1701 * 1248 108 92 32 chr2 99425341 99425592 -151262262 - HERV17 LTR ERV1 -5188 1708 1443 * 1941 107 95 64 chr2 99425573 99425994 -151261860 - HERV17 LTR ERV1 -5623 1273 711 * 29156 95 7 11 chr2 99425987 99430823 -151257031 - HERV17 LTR ERV1 -3445 4954 55 927 119 27 30 chr2 99430801 99430988 -151256866 - LTR12 LTR ERV1 -234 480 303 * 352 193 59 20 chr2 99430988 99431089 -151256765 - LTR30 LTR ERV1 -98 677 552 1219 112 159 7 chr2 99431089 99431346 -151256508 - LTR12 LTR ERV1 -433 2005 55 227 260 0 0 chr2 99431346 99431396 -151256458 - LTR30 LTR ERV1 -670 52 3 2093 130 0 0 chr2 99431622 99431914 -151255940 - AluSg1 SINE Alu -17 292 1 245 269 15 15 chr2 99431922 99431989 -151255865 - MIR SINE MIR -67 141 75 1085 100 0 0 chr2 99435046 99435186 -151252668 - AluSq/x SINE Alu -172 140 1 2134 129 0 6 chr2 99436122 99436433 -151251421 - AluSx SINE Alu -3 309 1 1063 187 35 5 chr2 99436685 99436883 -151250971 + MER20 DNA MER1_type 16 219 0 22 0 0 0 chr2 99437543 99437565 -151250289 + AT_rich Low_complexity Low_complexity 1 22 0 940 104 110 32 chr2 99439487 99439641 -151248213 - AluSg/x SINE Alu -17 295 130 328 232 14 0 chr2 99440201 99440270 -151247584 - MIR3 SINE MIR -31 177 108 30 83 0 0 chr2 99442373 99442445 -151245409 + AT_rich Low_complexity Low_complexity 1 72 0 375 316 63 6 chr2 99443513 99443671 -151244183 + L2 LINE L2 2893 3059 -213 2186 99 108 0 chr2 99444192 99444516 -151243338 + MER46B DNA MER2_type 1 234 -2 2219 152 53 15 chr2 99444837 99445232 -151242622 - MSTB1 LTR MaLR -1 431 22 30 0 0 0 chr2 99445821 99445851 -151242003 + AT_rich Low_complexity Low_complexity 1 30 0 2029 112 3 18 chr2 99445932 99446237 -151241617 - AluSx SINE Alu 0 301 1 1675 115 165 0 chr2 99447848 99448109 -151239745 - AluSx SINE Alu -8 304 1 2169 108 9 29 chr2 99451710 99452025 -151235829 - AluSx SINE Alu -3 309 1 1736 178 52 57 chr2 99452276 99452715 -151235139 - Charlie1a DNA MER1_type -2 1453 1017 3495 182 118 14 chr2 99452715 99453475 -151234379 - Charlie1a DNA MER1_type -614 841 3 873 246 57 9 chr2 99453716 99453944 -151233910 - MER8 DNA MER2_type 0 239 1 432 254 57 25 chr2 99457590 99457712 -151230142 - L2 LINE L2 0 3313 3188 1796 108 115 14 chr2 99458158 99458437 -151229417 + AluSg SINE Alu 1 307 -3 2641 48 3 0 chr2 99458471 99458780 -151229074 - AluY SINE Alu -1 310 1 1046 215 78 0 chr2 99460490 99460695 -151227159 + MER58A DNA MER1_type 1 221 -3 1519 238 107 47 chr2 99460715 99461274 -151226580 - MLT1E LTR MaLR 0 593 1 291 304 45 18 chr2 99462937 99463049 -151224805 + MIR SINE MIR 58 172 -90 184 256 0 0 chr2 99463343 99463386 -151224468 - L2 LINE L2 -1406 1908 1866 256 217 17 0 chr2 99464695 99464755 -151223099 - MER46C DNA MER2_type -1 337 277 1328 171 121 46 chr2 99465951 99466231 -151221623 - AluJo SINE Alu -1 301 1 3780 184 59 45 chr2 99466243 99467161 -151220693 - L1MD1 LINE L1 -8 6234 5304 1726 175 29 21 chr2 99467288 99467725 -151220129 - L1MC/D LINE L1 -619 6017 5576 9479 190 132 30 chr2 99467828 99471337 -151216517 - L1MDa LINE L1 -2671 3869 5 274 284 57 0 chr2 99471670 99471758 -151216096 - L2 LINE L2 -22 3250 3158 200 230 48 109 chr2 99472434 99472599 -151215255 - L2 LINE L2 -606 2708 2554 215 0 67 0 chr2 99472849 99472879 -151214975 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 1776 175 9 19 chr2 99472884 99473199 -151214655 - AluJo SINE Alu 0 312 1 851 167 56 28 chr2 99473203 99473383 -151214471 - MER5A DNA MER1_type -4 185 1 255 281 82 58 chr2 99473767 99473938 -151213916 + MER5B DNA MER1_type 1 175 -3 269 317 50 66 chr2 99474037 99474356 -151213498 - L2 LINE L2 -1217 2097 1784 2216 92 0 0 chr2 99474367 99474651 -151213203 - AluSx SINE Alu -15 297 14 381 43 0 0 chr2 99475068 99475115 -151212739 + (GTTTG)n Simple_repeat Simple_repeat 2 48 0 371 182 0 30 chr2 99475115 99475173 -151212681 - AluJ/FRAM SINE Alu -17 285 228 1085 177 56 0 chr2 99475343 99475541 -151212313 - MER58C DNA MER1_type -3 212 4 379 258 41 10 chr2 99475786 99475883 -151211971 + L2 LINE L2 3137 3236 -36 213 271 306 18 chr2 99475994 99476164 -151211690 - MIR SINE MIR -27 235 17 338 228 12 0 chr2 99476342 99476428 -151211426 + L1ME1 LINE L1 6090 6183 -1 2372 65 0 7 chr2 99476578 99476884 -151210970 + AluY SINE Alu 1 304 -7 380 272 53 9 chr2 99478600 99478714 -151209140 - L2 LINE L2 -3 3310 3192 191 296 0 0 chr2 99479014 99479058 -151208796 - MER5C DNA MER1_type 0 324 281 243 110 0 15 chr2 99479114 99479278 -151208576 + AluJb SINE Alu 86 295 -7 1938 131 3 3 chr2 99480021 99480319 -151207535 - AluSx SINE Alu -14 298 1 1527 152 3 119 chr2 99483809 99484144 -151203710 + AluJo SINE Alu 2 297 -5 1976 111 0 37 chr2 99484195 99484493 -151203361 + AluSx SINE Alu 3 289 -23 28 29 0 0 chr2 99485871 99485906 -151201948 + AT_rich Low_complexity Low_complexity 1 35 0 419 222 120 0 chr2 99487143 99487251 -151200603 - MER63 DNA MER1_type -315 747 1 185 119 24 0 chr2 99490307 99490349 -151197505 + GA-rich Low_complexity Low_complexity 2 44 0 2243 233 94 34 chr2 99490405 99491301 -151196553 - SST1 Satellite centromeric -27 1536 587 194 379 0 0 chr2 99491616 99491682 -151196172 + L3 LINE CR1 1409 1474 -103 393 297 111 23 chr2 99491818 99492096 -151195758 + L1MEd LINE L1 1072 1412 -4865 756 291 71 11 chr2 99492098 99492480 -151195374 + L1M4 LINE L1 4757 5161 -985 562 230 81 124 chr2 99492677 99493116 -151194738 + L1M4 LINE L1 3972 4370 -1776 1831 163 3 0 chr2 99493116 99493422 -151194432 - AluJo SINE Alu -5 307 1 562 230 81 124 chr2 99493422 99493690 -151194164 + L1M4 LINE L1 4370 4648 -1498 5042 190 28 0 chr2 99493792 99494811 -151193043 + L1 LINE L1 3192 4238 -1908 421 380 33 24 chr2 99495522 99495735 -151192119 - L1 LINE L1 -1906 4240 4026 2269 88 0 0 chr2 99495778 99496072 -151191782 + AluSp SINE Alu 3 296 -17 593 321 36 11 chr2 99496293 99496570 -151191284 - HAL1 LINE L1 -969 1538 1255 574 306 38 50 chr2 99496561 99496627 -151191227 - L1MC4 LINE L1 -2 8040 7975 * 1996 190 0 14 chr2 99496627 99496995 -151190859 - MLT1A1 LTR MaLR -2 363 1 574 306 38 50 chr2 99496995 99497408 -151190446 - L1MC4 LINE L1 -67 7975 7567 323 154 0 0 chr2 99497410 99497462 -151190392 - AluSp/q SINE Alu -5 298 247 193 247 311 47 chr2 99498135 99498370 -151189484 + L2 LINE L2 2443 2739 -575 384 282 95 15 chr2 99499051 99499324 -151188530 + L1 LINE L1 4406 4700 -1446 364 356 48 32 chr2 99499344 99499594 -151188260 + L1 LINE L1 4739 4992 -1154 433 191 0 12 chr2 99499614 99499698 -151188156 - AluSx SINE Alu -27 282 200 183 42 0 0 chr2 99499699 99499723 -151188131 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 800 121 8 23 chr2 99499723 99499855 -151187999 - AluSx SINE Alu -182 130 1 307 257 53 44 chr2 99499856 99499969 -151187885 + L1 LINE L1 4980 5093 -1053 953 276 107 5 chr2 99500203 99500623 -151187231 - L1M4 LINE L1 -1108 5038 4576 245 139 0 0 chr2 99500652 99500688 -151187166 - U2 snRNA snRNA -152 36 1 329 277 80 9 chr2 99501562 99501775 -151186079 - L1M4 LINE L1 -3405 2741 2514 22 35 0 0 chr2 99501808 99501837 -151186017 + AT_rich Low_complexity Low_complexity 1 29 0 251 264 19 28 chr2 99501852 99501958 -151185896 - L1M4 LINE L1 -3862 2284 2180 2206 93 0 40 chr2 99501959 99502135 -151185719 - AluSx SINE Alu -3 309 150 2260 89 13 0 chr2 99502135 99502439 -151185415 - AluY SINE Alu -3 308 1 2206 93 0 40 chr2 99502439 99502584 -151185270 - AluSx SINE Alu -162 150 1 764 198 17 0 chr2 99502584 99502756 -151185098 - L1 LINE L1 -3628 2518 2344 356 212 15 0 chr2 99502877 99502943 -151184911 + MER5B DNA MER1_type 58 124 -54 2000 118 10 13 chr2 99502968 99503274 -151184580 + AluSq SINE Alu 1 305 -8 2141 84 0 7 chr2 99503447 99503746 -151184108 + AluSx SINE Alu 9 305 -7 22 80 0 0 chr2 99503746 99503796 -151184058 + AT_rich Low_complexity Low_complexity 1 50 0 397 207 0 12 chr2 99504180 99504262 -151183592 - AluSg/x SINE Alu -1 299 219 353 253 42 137 chr2 99504410 99504448 -151183406 - HAL1 LINE L1 -46 2461 2421 2142 109 3 0 chr2 99504448 99504751 -151183103 + AluSx SINE Alu 1 304 -8 353 253 42 137 chr2 99504751 99504953 -151182901 - HAL1 LINE L1 -86 2421 2244 1750 105 105 0 chr2 99505272 99505538 -151182316 - AluSq SINE Alu -19 294 1 2191 102 10 0 chr2 99507805 99508109 -151179745 + AluSp SINE Alu 1 307 -6 2237 54 3 24 chr2 99508109 99508406 -151179448 + AluY SINE Alu 1 291 -20 2283 65 3 0 chr2 99508406 99508697 -151179157 + AluY SINE Alu 1 292 -19 289 230 57 11 chr2 99508726 99508813 -151179041 + L1MC/D LINE L1 5488 5575 -2211 703 169 7 28 chr2 99508844 99508986 -151178868 + MER74B LTR ERVL 3 141 -481 1159 211 63 30 chr2 99509140 99509623 -151178231 - L1M4 LINE L1 -570 5608 5106 698 143 0 9 chr2 99509624 99509736 -151178118 - MLT1A1 LTR MaLR 0 365 255 286 260 27 0 chr2 99509754 99509827 -151178027 + L2 LINE L2 289 363 -2951 4239 192 34 33 chr2 99509974 99510977 -151176877 - L1MB4 LINE L1 -6 6174 5174 2143 115 0 6 chr2 99510977 99511291 -151176563 + AluSx SINE Alu 1 312 0 4239 192 34 33 chr2 99511291 99511607 -151176247 - L1MB4 LINE L1 -1006 5174 4860 427 282 138 6 chr2 99511761 99511935 -151175919 - MIR SINE MIR -6 256 60 329 244 105 0 chr2 99512158 99512244 -151175610 + MIR SINE MIR 49 143 -65 304 297 26 88 chr2 99512575 99512680 -151175174 + HAL1 LINE L1 922 1011 -1496 2276 101 0 0 chr2 99512680 99512978 -151174876 + AluSq SINE Alu 1 298 -15 304 297 26 88 chr2 99512978 99513064 -151174790 + HAL1 LINE L1 1011 1101 -1406 192 313 52 0 chr2 99513065 99513161 -151174693 - MIR SINE MIR -71 137 37 283 240 40 0 chr2 99513500 99513575 -151174279 + MIR SINE MIR 111 188 -74 321 222 88 113 chr2 99513883 99514077 -151173777 + L1MC/D LINE L1 5322 5510 -2298 241 296 114 64 chr2 99514188 99514468 -151173386 + L2 LINE L2 2851 3144 -128 268 277 21 43 chr2 99514592 99514686 -151173168 + L3 LINE CR1 1372 1463 -114 2251 89 67 76 chr2 99515067 99515493 -151172361 + LTR14B LTR ERVK 1 608 0 509 273 135 43 chr2 99515696 99516088 -151171766 - MER97b DNA MER1_type? -3 1050 623 514 167 83 0 chr2 99518940 99519036 -151168818 - L2 LINE L2 -3 3310 3207 255 237 17 0 chr2 99519032 99519091 -151168763 + L2 LINE L2 2188 2247 -1067 * 388 264 241 26 chr2 99519206 99519895 -151167959 + L2 LINE L2 2470 3313 0 459 209 33 0 chr2 99520030 99520121 -151167733 - MER58C DNA MER1_type -9 206 113 22 0 0 0 chr2 99520121 99520143 -151167711 + AT_rich Low_complexity Low_complexity 1 22 0 2191 86 16 3 chr2 99520276 99520580 -151167274 - AluSc SINE Alu -1 308 1 267 277 15 0 chr2 99520588 99520653 -151167201 - MIR SINE MIR -52 210 145 499 309 119 5 chr2 99522144 99522354 -151165500 + MIR SINE MIR 18 251 -11 386 231 0 46 chr2 99523956 99524064 -151163790 - MER91B DNA MER1_type -52 138 36 306 244 128 0 chr2 99524430 99524516 -151163338 - L2 LINE L2 -1 3312 3216 2259 91 0 0 chr2 99525109 99525405 -151162449 - AluY SINE Alu -5 306 11 755 248 51 131 chr2 99525515 99525946 -151161908 + MLT1H LTR MaLR 78 463 -86 2143 128 0 0 chr2 99525946 99526244 -151161610 - AluSq SINE Alu -15 298 1 755 248 51 131 chr2 99526244 99526325 -151161529 + MLT1H LTR MaLR 463 549 0 590 220 73 52 chr2 99526649 99526840 -151161014 - MIR SINE MIR -38 224 30 421 314 0 15 chr2 99526829 99526965 -151160889 + MIR SINE MIR 29 163 -45 * 2147 99 3 3 chr2 99527136 99527429 -151160425 + AluSx SINE Alu 1 293 -19 214 315 14 0 chr2 99528343 99528416 -151159438 + GA-rich Low_complexity Low_complexity 1 74 0 295 259 132 70 chr2 99528885 99529128 -151158726 + MLT1H LTR MaLR 28 285 -264 380 264 25 41 chr2 99529221 99529342 -151158512 + MLT1H LTR MaLR 431 549 0 380 169 75 0 chr2 99530030 99530111 -151157743 - AluJ/FLAM SINE Alu -231 71 1 2188 57 0 0 chr2 99534671 99534935 -151152919 - AluY SINE Alu -13 298 35 342 177 32 0 chr2 99534935 99534997 -151152857 - MER58A DNA MER1_type -2 222 159 415 258 32 0 chr2 99535006 99535099 -151152755 - MER58A DNA MER1_type 0 112 17 1010 168 6 0 chr2 99535106 99535273 -151152581 + AluJo SINE Alu 122 289 -23 2112 117 0 10 chr2 99538117 99538424 -151149430 + AluSx SINE Alu 1 304 -8 1351 194 7 58 chr2 99538816 99539126 -151148728 - AluJo SINE Alu -16 296 3 2383 169 208 6 chr2 99539236 99539764 -151148090 - LTR24C LTR ERV1 0 635 1 646 302 73 46 chr2 99540727 99540814 -151147040 + MER110-int LTR ERV1 2218 2301 -2346 1743 190 128 3 chr2 99540814 99541198 -151146656 + MSTB1 LTR MaLR 1 432 0 646 302 73 46 chr2 99541198 99541481 -151146373 + MER110-int LTR ERV1 2301 2598 -2049 682 230 31 27 chr2 99542391 99542613 -151145241 + MER90 LTR ERV1 391 613 -1 391 246 90 16 chr2 99542629 99542751 -151145103 + MIR3 SINE MIR 14 144 -64 2596 33 0 0 chr2 99543507 99543811 -151144043 + AluY SINE Alu 1 304 -7 285 303 42 25 chr2 99545151 99545270 -151142584 - MIR SINE MIR -1 261 141 1340 246 150 2 chr2 99545336 99545762 -151142092 + L2 LINE L2 2823 3311 -2 280 279 44 44 chr2 99545754 99545890 -151141964 - MIR SINE MIR -124 138 3 * 559 301 114 42 chr2 99547598 99547930 -151139924 - L2 LINE L2 -33 3280 2925 227 329 0 0 chr2 99548075 99548157 -151139697 + L1ME2 LINE L1 5744 5825 -296 406 234 51 7 chr2 99548238 99548375 -151139479 + L1ME2 LINE L1 6022 6164 0 2308 195 90 33 chr2 99548541 99548925 -151138929 + MER82 DNA MER2_type 1 362 -291 1939 128 3 3 chr2 99548925 99549221 -151138633 + AluSq SINE Alu 1 296 -17 2004 98 13 32 chr2 99549223 99549539 -151138315 + AluSg SINE Alu 1 310 0 2308 195 90 33 chr2 99549539 99549574 -151138280 + MER82 DNA MER2_type 362 394 -259 2019 102 3 59 chr2 99549574 99549896 -151137958 + AluY SINE Alu 1 304 -7 2308 195 90 33 chr2 99549896 99550071 -151137783 + MER82 DNA MER2_type 394 633 -20 919 126 7 0 chr2 99550653 99550788 -151137066 + AluSq/x SINE Alu 1 136 -177 1901 82 60 8 chr2 99550790 99551088 -151136766 + AluSq SINE Alu 1 312 0 1545 276 83 14 chr2 99551101 99551593 -151136261 + L1ME1 LINE L1 5632 6157 -9 1019 205 144 46 chr2 99554469 99554969 -151132885 + L2 LINE L2 2716 3291 -22 238 290 70 62 chr2 99555125 99555397 -151132457 + L2 LINE L2 2939 3212 -60 512 272 70 33 chr2 99555445 99555658 -151132196 - MIR SINE MIR -29 233 13 243 347 11 0 chr2 99555790 99555885 -151131969 + MIR SINE MIR 60 155 -107 471 238 62 56 chr2 99555934 99556094 -151131760 - MER20 DNA MER1_type -58 161 1 423 280 33 27 chr2 99556272 99556422 -151131432 - MIR SINE MIR -100 162 12 268 183 40 0 chr2 99556745 99556823 -151131031 - MIR SINE MIR -65 143 61 3969 98 33 6 chr2 99558801 99559350 -151128504 + LTR6A LTR ERV1 1 564 0 286 245 408 0 chr2 99559700 99559847 -151128007 - MIR SINE MIR -22 240 34 271 314 20 10 chr2 99560344 99560446 -151127408 + L2 LINE L2 2965 3067 -205 2363 54 7 0 chr2 99560670 99560968 -151126886 - AluY SINE Alu -11 300 1 541 248 39 0 chr2 99561006 99561135 -151126719 + MIR SINE MIR 59 192 -70 852 243 70 94 chr2 99561474 99561766 -151126088 - L2 LINE L2 0 3313 3030 2487 47 7 0 chr2 99561766 99562065 -151125789 + AluY SINE Alu 11 311 0 852 243 70 94 chr2 99562065 99562143 -151125711 - L2 LINE L2 -283 3030 2952 314 263 111 10 chr2 99562163 99562262 -151125592 + L2 LINE L2 3204 3312 -1 524 250 150 14 chr2 99562323 99562543 -151125311 - MLT1K LTR MaLR -195 393 144 383 221 107 25 chr2 99562694 99562816 -151125038 - MIR SINE MIR -72 190 59 270 224 17 0 chr2 99563337 99563395 -151124459 + L2 LINE L2 3213 3271 -1 237 283 11 56 chr2 99564080 99564260 -151123594 + C-rich Low_complexity Low_complexity 2 173 0 * 281 320 17 23 chr2 99564161 99564405 -151123449 + CT-rich Low_complexity Low_complexity 1 242 0 2858 156 36 41 chr2 99564596 99565169 -151122685 - MER6A DNA MER2_type -260 605 31 1074 153 0 0 chr2 99565169 99565332 -151122522 + FRAM SINE Alu 4 166 0 2527 58 0 0 chr2 99565337 99565645 -151122209 + AluY SINE Alu 1 308 -3 2858 156 36 41 chr2 99565645 99565673 -151122181 - MER6A DNA MER2_type -838 27 1 651 192 48 20 chr2 99566291 99566437 -151121417 - MLT1C LTR MaLR 0 467 318 5536 104 25 13 chr2 99566442 99567269 -151120585 + L1MA3 LINE L1 5468 6304 -1 269 157 0 57 chr2 99567273 99567343 -151120511 + MLT2F LTR ERVL 598 663 0 629 276 140 8 chr2 99567380 99567623 -151120231 + ERVL-F LTR ERVL 119 393 -5371 2279 85 0 0 chr2 99567654 99567949 -151119905 + AluSx SINE Alu 1 295 -17 2402 39 0 26 chr2 99570264 99570571 -151117283 + AluY SINE Alu 1 299 -12 183 42 0 0 chr2 99571667 99571691 -151116163 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2009 87 0 31 chr2 99571695 99571981 -151115873 - AluSq SINE Alu -36 277 1 860 204 21 11 chr2 99572492 99572678 -151115176 - MER5A DNA MER1_type 0 189 2 288 298 143 48 chr2 99572944 99573216 -151114638 + L3 LINE CR1 1174 1471 -106 1303 161 0 32 chr2 99573333 99573581 -151114273 + AluJo SINE Alu 73 312 0 2267 99 16 0 chr2 99574536 99574840 -151113014 - AluSx SINE Alu -3 309 1 211 303 123 25 chr2 99575173 99575295 -151112559 + L2 LINE L2 3139 3272 0 362 113 0 0 chr2 99575307 99575360 -151112494 + MLT1F LTR MaLR 384 436 -106 1115 134 0 0 chr2 99575379 99575528 -151112326 + AluSg/x SINE Alu 137 285 -27 1112 148 50 5 chr2 99575630 99575847 -151112007 - L1M3 LINE L1 -609 5562 5338 348 243 76 19 chr2 99575863 99576004 -151111850 - L1MD3 LINE L1 -1261 6803 6701 284 197 169 0 chr2 99577807 99577878 -151109976 + MER5A DNA MER1_type 24 106 -83 2129 116 7 3 chr2 99578742 99579036 -151108818 - AluSg SINE Alu -15 295 1 2257 72 0 10 chr2 99580070 99580363 -151107491 - AluY SINE Alu -13 298 9 24 77 0 0 chr2 99580612 99580664 -151107190 + AT_rich Low_complexity Low_complexity 1 52 0 41855 43 1 1 chr2 99581245 99587391 -151100463 - L1PA3 LINE L1 -3 6152 9 23 33 0 0 chr2 99587750 99587780 -151100074 + AT_rich Low_complexity Low_complexity 1 30 0 290 328 47 42 chr2 99589723 99589915 -151097939 + L2 LINE L2 2550 2742 -572 516 253 0 13 chr2 99590031 99590181 -151097673 - L1MA10 LINE L1 -11 6323 6176 1713 227 36 20 chr2 99590202 99590983 -151096871 - L1MD3 LINE L1 -745 5470 4866 234 188 146 0 chr2 99591050 99591098 -151096756 - Tigger5 DNA MER2_type -2268 55 1 1662 152 100 6 chr2 99591116 99591446 -151096408 + MER46B DNA MER2_type 1 236 0 1011 214 93 22 chr2 99591455 99591820 -151096034 - L1MD3 LINE L1 -1374 4841 4451 436 270 31 0 chr2 99591900 99592063 -151095791 - L1MD3 LINE L1 -1753 4462 4295 575 221 15 0 chr2 99592109 99592240 -151095614 - MER58B DNA MER1_type -33 308 176 1414 256 34 17 chr2 99592303 99592772 -151095082 - L1MD3 LINE L1 -1939 4276 3800 2269 197 52 17 chr2 99592779 99593357 -151094497 - L1MC1 LINE L1 -9 6324 5727 1189 251 39 12 chr2 99593474 99593963 -151093891 - L1MD3 LINE L1 -2475 3740 3239 1413 197 42 18 chr2 99593979 99594314 -151093540 - MLT1A1 LTR MaLR -22 343 1 1402 238 52 38 chr2 99594315 99595524 -151092330 - L1MD3 LINE L1 -3009 3206 1953 987 290 55 58 chr2 99595880 99596486 -151091368 - L1MD3 LINE L1 -5753 643 40 214 373 45 0 chr2 99596507 99596617 -151091237 + L2 LINE L2 2938 3052 -220 198 0 0 0 chr2 99596661 99596683 -151091171 + (T)n Simple_repeat Simple_repeat 1 22 0 295 287 116 38 chr2 99597338 99597631 -151090223 - L1ME LINE L1 -283 5838 5523 21 0 0 0 chr2 99597652 99597673 -151090181 + AT_rich Low_complexity Low_complexity 1 21 0 1998 134 7 3 chr2 99597674 99597972 -151089882 + AluSg SINE Alu 1 299 -11 5292 75 19 3 chr2 99598728 99599477 -151088377 - MER4E LTR ERV1 -5 761 1 26 50 0 0 chr2 99599840 99599880 -151087974 + AT_rich Low_complexity Low_complexity 1 40 0 21 57 0 0 chr2 99602422 99602457 -151085397 + AT_rich Low_complexity Low_complexity 1 35 0 348 335 59 0 chr2 99602579 99602749 -151085105 - L2 LINE L2 -409 2905 2726 22 56 0 0 chr2 99603401 99603437 -151084417 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr2 99603463 99603496 -151084358 + AT_rich Low_complexity Low_complexity 1 33 0 22 56 0 0 chr2 99603531 99603567 -151084287 + AT_rich Low_complexity Low_complexity 1 36 0 762 223 22 11 chr2 99604486 99604670 -151083184 - MER58A DNA MER1_type 0 224 39 272 192 0 0 chr2 99604737 99604789 -151083065 - L1M1 LINE L1 -525 5779 5728 1938 150 38 3 chr2 99605378 99605724 -151082130 - MER46B DNA MER2_type -2 234 2 270 157 0 0 chr2 99606173 99606224 -151081630 - MLT1L LTR MaLR -221 394 344 1181 256 59 16 chr2 99606343 99606781 -151081073 + MLT1L LTR MaLR 152 608 -7 281 301 81 12 chr2 99607737 99607910 -151079944 + MLT1K LTR MaLR 190 374 -214 437 320 95 48 chr2 99608358 99608805 -151079049 - L1ME3 LINE L1 -197 5965 5494 896 168 25 0 chr2 99608812 99608973 -151078881 - FRAM SINE Alu -1 165 1 1263 193 255 21 chr2 99609015 99609435 -151078419 - MLT1E1 LTR MaLR 0 654 137 3736 191 32 6 chr2 99609569 99610389 -151077465 - L1MB3 LINE L1 -7 6176 5336 359 326 83 0 chr2 99610390 99610598 -151077256 - L1ME3 LINE L1 -743 5403 5211 36064 83 9 13 chr2 99610841 99617003 -151070851 + L1PA5 LINE L1 11 6147 -7 718 281 10 13 chr2 99617070 99617380 -151070474 + L1M4 LINE L1 2172 2480 -3666 326 298 10 16 chr2 99617382 99617654 -151070200 - L1M LINE L1 -837 5309 5158 2488 199 20 65 chr2 99617797 99618440 -151069414 + MER90 LTR ERV1 1 614 0 1353 152 40 119 chr2 99619441 99619836 -151068018 - MLT1A1 LTR MaLR -1 364 1 371 245 82 82 chr2 99620185 99620332 -151067522 - L2 LINE L2 -1 3271 3125 185 338 77 86 chr2 99620403 99620625 -151067229 + L2 LINE L2 2948 3167 -105 256 311 61 27 chr2 99620768 99620916 -151066938 + L3 LINE CR1 1300 1452 -125 2191 100 7 3 chr2 99620952 99621252 -151066602 + AluSg SINE Alu 1 301 -9 232 250 0 0 chr2 99622156 99622200 -151065654 - MIR3 SINE MIR -23 185 142 352 329 101 69 chr2 99622284 99623129 -151064725 - L1M2 LINE L1 -5429 1420 549 227 230 39 56 chr2 99623643 99623821 -151064033 + (GAGTG)n Simple_repeat Simple_repeat 3 177 0 * 359 199 5 99 chr2 99623688 99623879 -151063975 + G-rich Low_complexity Low_complexity 3 175 0 3664 166 21 21 chr2 99624933 99625781 -151062073 + L1MB3 LINE L1 4904 5836 -347 2278 73 15 64 chr2 99625781 99626108 -151061746 + AluY SINE Alu 1 311 0 3664 166 21 21 chr2 99626108 99626455 -151061399 + L1MB3 LINE L1 5836 6181 -2 262 155 0 0 chr2 99626461 99626519 -151061335 - MER115 DNA AcHobo -34 659 602 379 264 8 23 chr2 99626692 99626821 -151061033 + L1M4 LINE L1 3787 3913 -2233 2678 163 8 0 chr2 99626848 99627320 -151060534 + L1MB2 LINE L1 5488 5963 -208 203 256 0 0 chr2 99627366 99627409 -151060445 + (TATG)n Simple_repeat Simple_repeat 3 45 0 229 278 34 57 chr2 99627466 99627631 -151060223 + L1M4 LINE L1 4036 4198 -1948 2394 107 3 0 chr2 99627631 99627941 -151059913 + AluSx SINE Alu 1 311 -1 444 280 83 49 chr2 99627965 99628376 -151059478 + L1M4 LINE L1 4280 4704 -1442 245 62 0 0 chr2 99628422 99628454 -151059400 + Alu SINE Alu 4 35 -265 1008 43 0 0 chr2 99628454 99628569 -151059285 - AluSp/q SINE Alu -33 280 166 2468 91 3 0 chr2 99629261 99629568 -151058286 + AluSg SINE Alu 1 308 -2 2359 100 0 3 chr2 99629657 99629966 -151057888 + AluY SINE Alu 1 308 -3 2268 95 6 25 chr2 99630178 99630495 -151057359 - AluSx SINE Alu -1 311 1 180 0 0 0 chr2 99632911 99632931 -151054923 + (TGG)n Simple_repeat Simple_repeat 3 22 0 495 145 8 89 chr2 99632931 99632966 -151054888 - L1MB4 LINE L1 -14 6166 6130 1978 158 0 7 chr2 99632966 99633258 -151054596 - AluJo SINE Alu -22 290 1 495 145 8 89 chr2 99633258 99633346 -151054508 - L1MB4 LINE L1 -50 6130 6053 1559 161 4 12 chr2 99633346 99633588 -151054266 - AluSx SINE Alu -53 259 20 2267 103 3 3 chr2 99633623 99633923 -151053931 + AluSg SINE Alu 1 300 -10 1728 199 7 77 chr2 99633951 99634369 -151053485 + MSTD LTR MaLR 1 389 -7 1998 196 34 44 chr2 99634373 99634478 -151053376 - L1M3 LINE L1 -613 5567 5463 2291 114 0 0 chr2 99634478 99634777 -151053077 + AluSx SINE Alu 1 299 -13 2454 92 0 0 chr2 99634782 99635087 -151052767 + AluY SINE Alu 7 311 0 1998 196 34 44 chr2 99635087 99635112 -151052742 - L1M3 LINE L1 -721 5459 5435 2571 81 0 0 chr2 99635112 99635422 -151052432 + AluY SINE Alu 1 310 -1 1998 196 34 44 chr2 99635422 99636005 -151051849 - L1M3 LINE L1 -745 5435 4847 2675 53 0 0 chr2 99636006 99636309 -151051545 + AluY SINE Alu 1 303 -8 1305 79 0 45 chr2 99636309 99636487 -151051367 + AluY SINE Alu 133 302 -9 7265 236 32 29 chr2 99636488 99636787 -151051067 - L1M3 LINE L1 -1296 4850 4554 798 156 7 22 chr2 99636787 99636922 -151050932 - FLAM_C SINE Alu 0 133 1 7265 236 32 29 chr2 99636922 99637222 -151050632 - L1M3 LINE L1 -1592 4554 4257 345 24 0 0 chr2 99637222 99637264 -151050590 + (TG)n Simple_repeat Simple_repeat 1 42 0 7265 236 32 29 chr2 99637264 99638474 -151049380 - L1M3 LINE L1 -1889 4257 3027 2364 55 4 0 chr2 99638474 99638749 -151049105 - AluY SINE Alu -20 291 16 7265 236 32 29 chr2 99638749 99639183 -151048671 - L1M3 LINE L1 -3119 3027 2596 1389 87 0 5 chr2 99639204 99639389 -151048465 - AluSc SINE Alu 0 309 126 2585 59 0 0 chr2 99639392 99639696 -151048158 - AluY SINE Alu -7 304 1 323 136 51 0 chr2 99639698 99639757 -151048097 - L1M3 LINE L1 -3558 2588 2527 * 3462 261 107 71 chr2 99639750 99640018 -151047836 - L1M4c LINE L1 -3756 2640 2383 2256 128 3 0 chr2 99640018 99640323 -151047531 - AluSx SINE Alu -6 306 1 3462 261 107 71 chr2 99640323 99640473 -151047381 - L1M4c LINE L1 -4013 2383 2240 2388 97 16 0 chr2 99640473 99640781 -151047073 - AluSq SINE Alu 0 313 1 3462 261 107 71 chr2 99640781 99641332 -151046522 - L1M4c LINE L1 -4156 2240 1710 1871 174 0 28 chr2 99641332 99641653 -151046201 - AluJb SINE Alu 0 312 1 3462 261 107 71 chr2 99641653 99642118 -151045736 - L1M4c LINE L1 -4686 1710 1263 2361 86 0 0 chr2 99642118 99642410 -151045444 - AluY SINE Alu -7 304 13 3462 261 107 71 chr2 99642410 99643399 -151044455 - L1M4c LINE L1 -5133 1263 30 189 235 0 20 chr2 99643400 99643451 -151044403 + MIR3 SINE MIR 113 162 -46 239 219 110 85 chr2 99643464 99643546 -151044308 + MER5B DNA MER1_type 28 111 -67 1513 181 13 56 chr2 99643560 99643864 -151043990 - AluJo SINE Alu -21 291 1 1911 76 0 8 chr2 99643877 99644113 -151043741 - AluSg/x SINE Alu 0 310 77 247 315 28 9 chr2 99646250 99646358 -151041496 + MLT1J LTR MaLR 402 511 0 258 297 62 55 chr2 99648371 99648516 -151039338 - MER5B DNA MER1_type -32 146 1 1400 133 0 14 chr2 99648894 99649112 -151038742 + AluJo SINE Alu 1 215 -97 339 68 0 0 chr2 99649114 99649158 -151038696 + AluSg/x SINE Alu 81 124 -176 1086 110 0 0 chr2 99649219 99649364 -151038490 + AluSg/x SINE Alu 131 275 -37 227 294 29 37 chr2 99649942 99650078 -151037776 - MLT1J LTR MaLR -146 365 231 329 244 50 50 chr2 99651136 99651255 -151036599 - MLT1K LTR MaLR -23 565 447 259 270 27 45 chr2 99651409 99651520 -151036334 - MLT1K LTR MaLR -326 262 154 1562 216 104 34 chr2 99651706 99652178 -151035676 + MLT1D LTR MaLR 1 505 0 1238 205 51 13 chr2 99652233 99652314 -151035540 - MER33 DNA MER1_type -2261 324 248 2080 136 10 0 chr2 99652314 99652623 -151035231 + AluSx SINE Alu 1 312 0 1238 205 51 13 chr2 99652623 99652853 -151035001 - MER33 DNA MER1_type -2337 248 1 229 216 54 27 chr2 99654102 99654176 -151033678 - MIR SINE MIR -60 202 127 466 255 69 39 chr2 99654185 99654389 -151033465 - MLT1I LTR MaLR 0 409 200 274 250 159 0 chr2 99655844 99655932 -151031922 + MIR3 SINE MIR 85 186 -22 654 277 61 56 chr2 99656127 99656521 -151031333 + LTR7 LTR ERV1 24 419 -31 919 273 51 31 chr2 99656649 99657038 -151030816 - MLT1I LTR MaLR -12 397 1 436 207 25 50 chr2 99657522 99657643 -151030211 + MIR SINE MIR 48 165 -97 328 324 17 45 chr2 99659357 99659536 -151028318 + L1ME LINE L1 5571 5746 -375 257 350 33 8 chr2 99659670 99659790 -151028064 - L2 LINE L2 0 3313 3191 228 317 10 48 chr2 99660883 99660987 -151026867 + MIR SINE MIR 113 212 -50 295 194 31 82 chr2 99661069 99661167 -151026687 - MIR SINE MIR -123 139 47 476 200 9 0 chr2 99662866 99662976 -151024878 + (TCCA)n Simple_repeat Simple_repeat 1 111 0 1146 145 2 2 chr2 99662988 99663428 -151024426 + (TCCA)n Simple_repeat Simple_repeat 1 619 0 363 260 49 32 chr2 99663469 99663592 -151024262 + L2 LINE L2 3187 3311 -2 230 368 39 26 chr2 99663662 99663817 -151024037 - MIR3 SINE MIR -44 164 8 385 222 30 20 chr2 99664184 99664283 -151023571 + MIR SINE MIR 25 124 -84 202 352 57 9 chr2 99664297 99664402 -151023452 - MER5A DNA MER1_type -26 163 54 262 305 106 40 chr2 99664844 99664995 -151022859 + MIR SINE MIR 65 225 -37 319 100 80 0 chr2 99665351 99665401 -151022453 - MSTB LTR MaLR -372 54 1 365 270 82 106 chr2 99665530 99665897 -151021957 + L2 LINE L2 2914 3271 -1 185 308 103 13 chr2 99665892 99665970 -151021884 + L2 LINE L2 373 457 -2857 * 1267 140 11 0 chr2 99668207 99668393 -151019461 - AluSq SINE Alu -20 293 106 232 271 178 9 chr2 99668579 99668686 -151019168 + HAL1 LINE L1 1613 1737 -770 268 304 114 27 chr2 99670166 99670350 -151017504 - MIR SINE MIR -18 244 45 192 267 40 0 chr2 99670640 99670715 -151017139 - L2 LINE L2 -272 3000 2923 3386 193 23 32 chr2 99670770 99671390 -151016464 - L1MC1 LINE L1 -460 5873 5249 2099 112 0 46 chr2 99671390 99671695 -151016159 + AluSx SINE Alu 1 291 -21 3386 193 23 32 chr2 99671695 99672599 -151015255 - L1MC1 LINE L1 -1084 5249 4369 6671 118 13 5 chr2 99672671 99673861 -151013993 - L1MA2 LINE L1 -23 6281 5082 1718 186 4 0 chr2 99673861 99674140 -151013714 + AluSx SINE Alu 1 280 -32 441 36 0 0 chr2 99674145 99674200 -151013654 + (GGAA)n Simple_repeat Simple_repeat 2 56 0 285 271 0 40 chr2 99674365 99674542 -151013312 + GA-rich Low_complexity Low_complexity 1 170 0 278 301 30 8 chr2 99675125 99675258 -151012596 + L1ME LINE L1 5526 5661 -460 27 29 0 0 chr2 99675329 99675363 -151012491 + AT_rich Low_complexity Low_complexity 1 34 0 2190 111 7 3 chr2 99675702 99676008 -151011846 - AluSx SINE Alu -5 307 1 21 0 0 0 chr2 99676163 99676184 -151011670 + AT_rich Low_complexity Low_complexity 1 21 0 267 329 6 30 chr2 99676809 99676973 -151010881 - MER104 DNA Tc2 -3 177 18 547 287 96 39 chr2 99677107 99677337 -151010517 - MIR SINE MIR 0 262 20 224 59 29 0 chr2 99679242 99679276 -151008578 + (CAA)n Simple_repeat Simple_repeat 2 36 0 31 0 0 0 chr2 99679941 99679972 -151007882 + AT_rich Low_complexity Low_complexity 1 31 0 405 295 98 9 chr2 99680282 99680506 -151007348 + MER102a DNA MER1_type 87 330 0 2163 84 0 21 chr2 99680792 99681107 -151006747 + AluY SINE Alu 1 309 0 198 313 100 25 chr2 99681954 99682034 -151005820 - L2 LINE L2 -48 3224 3139 457 276 106 20 chr2 99682905 99683104 -151004750 + MIR SINE MIR 22 237 -25 306 55 91 18 chr2 99683200 99683310 -151004544 + (TA)n Simple_repeat Simple_repeat 2 119 0 438 102 0 0 chr2 99685278 99685337 -151002517 + U6 snRNA snRNA 1 59 -48 27 49 0 0 chr2 99685798 99685839 -151002015 + AT_rich Low_complexity Low_complexity 1 41 0 23 33 0 0 chr2 99686417 99686447 -151001407 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 99686714 99686736 -151001118 + AT_rich Low_complexity Low_complexity 1 22 0 409 169 7 29 chr2 99686910 99687043 -151000811 - Tigger2 DNA MER2_type 0 2718 2497 24 32 0 0 chr2 99687208 99687239 -151000615 + AT_rich Low_complexity Low_complexity 1 31 0 194 361 21 10 chr2 99687351 99687448 -151000406 - L2 LINE L2 -787 2527 2430 276 308 139 59 chr2 99687540 99687913 -150999941 - L2 LINE L2 -1054 2260 1858 7856 26 1 0 chr2 99688304 99689541 -150998313 - L1PA4 LINE L1 -457 5698 4461 3415 43 16 2 chr2 99689541 99689980 -150997874 + L1PA4 LINE L1 5710 6154 -1 35 24 0 0 chr2 99690427 99690469 -150997385 + AT_rich Low_complexity Low_complexity 1 42 0 1486 213 0 30 chr2 99690603 99690903 -150996951 - AluJo SINE Alu -15 297 7 2095 114 0 3 chr2 99691245 99691534 -150996320 - AluSc SINE Alu -21 288 1 819 228 25 0 chr2 99691544 99691702 -150996152 - FAM SINE Alu -13 162 1 2390 218 36 14 chr2 99692041 99692591 -150995263 - MER68 LTR ERV1 0 562 1 1706 221 51 2 chr2 99693171 99693582 -150994272 - L1MC1 LINE L1 -11 6322 5892 180 0 0 0 chr2 99694086 99694106 -150993748 + (TTG)n Simple_repeat Simple_repeat 2 21 0 22 0 0 0 chr2 99694170 99694192 -150993662 + AT_rich Low_complexity Low_complexity 1 22 0 2992 214 43 33 chr2 99694643 99695309 -150992545 - MER44D DNA MER2_type -1882 705 30 3003 178 116 77 chr2 99695309 99696136 -150991718 + MER21B LTR ERV1 1 859 -4 2992 214 43 33 chr2 99696136 99696167 -150991687 - MER44D DNA MER2_type -2557 30 1 1969 135 3 26 chr2 99696565 99696868 -150990986 - AluSx SINE Alu -16 296 1 633 197 8 25 chr2 99696875 99696997 -150990857 - FLAM_A SINE Alu -17 125 6 234 0 0 0 chr2 99697009 99697035 -150990819 + (CA)n Simple_repeat Simple_repeat 2 27 0 3084 76 0 0 chr2 99697038 99697508 -150990346 - L1P3 LINE L1 -503 5651 5182 * 7099 98 22 1 chr2 99697493 99698542 -150989312 + L1P3 LINE L1 4103 5173 -973 23 0 0 0 chr2 99698718 99698741 -150989113 + AT_rich Low_complexity Low_complexity 1 23 0 243 61 0 0 chr2 99699435 99699468 -150988386 + (TG)n Simple_repeat Simple_repeat 2 34 0 22 35 0 0 chr2 99700853 99700882 -150986972 + AT_rich Low_complexity Low_complexity 1 29 0 299 235 153 0 chr2 99702333 99702418 -150985436 - MER5A DNA MER1_type -83 106 9 3239 152 15 11 chr2 99705072 99705597 -150982257 + MER1A DNA MER1_type 1 527 0 2108 129 7 10 chr2 99705683 99705985 -150981869 + AluSx SINE Alu 3 303 -9 2035 100 40 10 chr2 99706167 99706466 -150981388 - AluY SINE Alu -3 308 1 7285 251 52 24 chr2 99708175 99709775 -150978079 - L1M4 LINE L1 -1005 6560 5006 2080 138 0 3 chr2 99709775 99710072 -150977782 + AluSq SINE Alu 1 296 -17 7285 251 52 24 chr2 99710072 99712012 -150975842 - L1M4 LINE L1 -2559 5006 3122 1955 123 0 58 chr2 99712012 99712320 -150975534 - AluSg SINE Alu -20 290 1 7285 251 52 24 chr2 99712320 99712345 -150975509 - L1M4 LINE L1 -4443 3122 3099 180 111 0 0 chr2 99712345 99712372 -150975482 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7285 251 52 24 chr2 99712372 99713004 -150974850 - L1M4 LINE L1 -4466 3099 2273 9514 148 52 55 chr2 99713004 99714957 -150972897 - Tigger1 DNA MER2_type 0 2418 472 4574 244 61 36 chr2 99714962 99716275 -150971579 + L1M3de LINE L1 882 2137 -4516 1757 206 21 71 chr2 99716276 99716712 -150971142 + MSTB LTR MaLR 1 414 -12 731 203 155 5 chr2 99716765 99716952 -150970902 + MSTB-int LTR MaLR 3 217 -1434 2004 235 99 4 chr2 99716965 99717964 -150969890 - L1MC/D LINE L1 -745 5401 4472 1943 205 80 42 chr2 99718303 99718470 -150969384 + L1PA12 LINE L1 603 762 -6819 2122 135 0 0 chr2 99718470 99718782 -150969072 - AluSx SINE Alu 0 312 1 1943 205 80 42 chr2 99718782 99719165 -150968689 + L1PA12 LINE L1 762 1174 -6407 1299 238 104 33 chr2 99719161 99719950 -150967904 - L1PA12 LINE L1 -5954 1627 797 * 922 193 57 130 chr2 99719963 99720439 -150967415 - L1PA12 LINE L1 -6407 1174 734 251 219 47 0 chr2 99720437 99720501 -150967353 + L1PA12 LINE L1 838 904 -6677 * 414 237 11 0 chr2 99720510 99720603 -150967251 + L1PA12 LINE L1 810 903 -6678 576 226 252 32 chr2 99720616 99721219 -150966635 + L1PA12 LINE L1 799 1438 -6143 279 135 154 0 chr2 99721233 99721285 -150966569 + L1PA12 LINE L1 815 874 -6707 386 317 66 12 chr2 99721411 99721578 -150966276 - MIR SINE MIR -64 198 23 1292 259 121 5 chr2 99722147 99722568 -150965286 - MLT1D LTR MaLR 0 505 36 22 35 0 0 chr2 99723686 99723715 -150964139 + AT_rich Low_complexity Low_complexity 1 29 0 341 241 89 0 chr2 99723768 99723880 -150963974 - L1ME3A LINE L1 -44 6126 6005 3753 207 36 1 chr2 99723922 99724696 -150963158 - MLT1A1-int LTR MaLR -934 801 1 926 225 44 40 chr2 99724696 99724945 -150962909 - MLT1A1 LTR MaLR 0 365 116 385 237 156 0 chr2 99725343 99725478 -150962376 + MLT1H LTR MaLR 81 236 -313 236 194 0 125 chr2 99725625 99725697 -150962157 - MER97b DNA MER1_type? -874 179 117 969 35 0 0 chr2 99726181 99726295 -150961559 + AluY SINE Alu 164 277 -34 273 29 0 0 chr2 99726299 99726333 -150961521 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 843 111 17 0 chr2 99726333 99726450 -150961404 + Charlie3 DNA MER1_type 2584 2702 -8 1556 201 53 39 chr2 99727767 99728126 -150959728 + MLT1A1 LTR MaLR 2 365 0 3837 199 53 10 chr2 99728126 99728894 -150958960 + MLT1A1-int LTR MaLR 1 801 -934 306 257 88 0 chr2 99728936 99729049 -150958805 + L1ME3A LINE L1 6005 6127 -43 2758 80 74 0 chr2 99729678 99730029 -150957825 + MER51B LTR ERV1 1 377 0 558 121 0 0 chr2 99730411 99730494 -150957360 + LTR39 LTR ERV1 551 633 -150 699 249 108 17 chr2 99730774 99731015 -150956839 + LTR48B LTR ERV1 382 644 0 712 304 77 9 chr2 99733666 99734005 -150953849 + LTR16C LTR ERVL 93 454 -37 1177 161 47 47 chr2 99734092 99734328 -150953526 + LTR19B LTR ERV1 1 236 -344 1676 27 0 0 chr2 99734429 99734617 -150953237 - L1P LINE L1 -1982 4164 3977 7829 43 0 6 chr2 99734617 99735989 -150951865 + L1PA5 LINE L1 4788 6154 0 1414 169 0 16 chr2 99736866 99737115 -150950739 + L1PA12 LINE L1 1 245 -7336 831 167 0 0 chr2 99737113 99737251 -150950603 + L1PA12 LINE L1 3284 3421 -4163 * 13968 148 41 36 chr2 99737266 99737576 -150950278 + L1PA12 LINE L1 4287 4594 -3012 252 0 0 0 chr2 99737576 99737604 -150950250 + (CA)n Simple_repeat Simple_repeat 2 29 0 13968 148 41 36 chr2 99737604 99738668 -150949186 + L1PA12 LINE L1 4594 5651 -1955 2129 104 0 13 chr2 99738668 99738967 -150948887 - AluSc SINE Alu -14 295 1 13968 148 41 36 chr2 99738967 99739988 -150947866 + L1PA12 LINE L1 5651 6732 -874 2243 122 0 0 chr2 99739988 99740300 -150947554 + AluSx SINE Alu 1 312 0 13968 148 41 36 chr2 99740300 99741180 -150946674 + L1PA12 LINE L1 6732 7606 0 646 308 65 38 chr2 99741241 99741686 -150946168 - MLT1J LTR MaLR -16 495 39 43 20 0 0 chr2 99741686 99741736 -150946118 + AT_rich Low_complexity Low_complexity 1 50 0 323 405 82 6 chr2 99741852 99742205 -150945649 + L1ME LINE L1 5336 5715 -447 1783 168 0 16 chr2 99742479 99742782 -150945072 + AluJb SINE Alu 1 298 -14 409 164 14 0 chr2 99743008 99743081 -150944773 + LTR24C LTR ERV1 562 635 0 231 359 0 9 chr2 99744128 99744234 -150943620 - 5S rRNA rRNA 0 121 17 248 338 14 0 chr2 99745119 99745258 -150942596 + (TATG)n Simple_repeat Simple_repeat 2 142 0 560 236 79 25 chr2 99745258 99745461 -150942393 - LTR49 LTR ERV1 0 595 382 348 24 0 0 chr2 99746364 99746405 -150941449 + (CA)n Simple_repeat Simple_repeat 2 42 0 252 174 9 4 chr2 99747196 99747252 -150940602 + L1ME LINE L1 5776 5819 -302 8199 146 22 4 chr2 99747273 99747856 -150939998 + L1PA11 LINE L1 4079 4650 -1524 216 0 0 0 chr2 99747856 99747880 -150939974 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8199 146 22 4 chr2 99747880 99749363 -150938491 + L1PA11 LINE L1 4650 6170 -4 797 219 36 67 chr2 99750302 99750526 -150937328 - MER20 DNA MER1_type 0 219 3 284 170 0 0 chr2 99750956 99751003 -150936851 - L2 LINE L2 0 3313 3267 259 353 73 27 chr2 99751332 99751482 -150936372 + L3b LINE CR1 1411 1567 -16 2116 122 0 0 chr2 99751603 99751889 -150935965 - AluSx SINE Alu -26 286 1 229 111 0 28 chr2 99752250 99752286 -150935568 + MER53 DNA DNA 155 189 0 365 186 196 0 chr2 99752323 99752420 -150935434 - MIR SINE MIR -119 143 28 5426 46 1 0 chr2 99753230 99754350 -150933504 - L1PA5 LINE L1 -246 5908 4788 * 6994 41 12 5 chr2 99754348 99755203 -150932651 + L1P LINE L1 3975 4835 -1311 181 211 35 53 chr2 99755916 99755973 -150931881 - L2 LINE L2 -336 2977 2922 35 107 0 0 chr2 99756096 99756236 -150931618 + AT_rich Low_complexity Low_complexity 1 140 0 26 116 0 0 chr2 99756357 99756495 -150931359 + AT_rich Low_complexity Low_complexity 1 138 0 190 200 111 0 chr2 99756699 99756744 -150931110 - MER5C DNA MER1_type -2 322 273 244 163 265 41 chr2 99756764 99756862 -150930992 - MER5C DNA MER1_type -200 124 5 630 202 8 8 chr2 99757392 99757511 -150930343 + FLAM_C SINE Alu 25 143 0 210 233 0 0 chr2 99757734 99757777 -150930077 + GA-rich Low_complexity Low_complexity 3 45 0 273 29 0 0 chr2 99758270 99758304 -150929550 + (CA)n Simple_repeat Simple_repeat 1 34 0 229 273 193 7 chr2 99758485 99758644 -150929210 + MIR SINE MIR 66 260 -2 213 39 0 0 chr2 99758782 99758808 -150929046 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 1275 205 112 19 chr2 99758808 99759066 -150928788 - AluJb SINE Alu -17 285 4 1777 143 0 84 chr2 99759151 99759473 -150928381 + AluSx SINE Alu 1 295 -17 993 229 15 11 chr2 99759732 99759999 -150927855 - L1MC3 LINE L1 -7 7778 7511 1779 140 33 0 chr2 99760170 99760442 -150927412 - MSTA LTR MaLR -147 281 1 724 182 0 0 chr2 99760444 99760554 -150927300 - AluJb SINE Alu -201 111 2 519 259 85 36 chr2 99761769 99761993 -150925861 + MIR SINE MIR 3 237 -25 204 40 0 0 chr2 99762007 99762032 -150925822 + (ATG)n Simple_repeat Simple_repeat 2 26 0 186 216 27 0 chr2 99762144 99762181 -150925673 - L2 LINE L2 -231 3041 3004 3256 161 148 20 chr2 99765411 99766121 -150921733 + L1P LINE L1 3990 4790 -1356 * 7118 206 37 8 chr2 99766112 99766428 -150921426 - L1PA12 LINE L1 -2134 5450 5145 468 0 0 0 chr2 99766428 99766480 -150921374 + (TG)n Simple_repeat Simple_repeat 2 53 0 7118 206 37 8 chr2 99766480 99767745 -150920109 - L1PA12 LINE L1 -2439 5145 3819 7930 120 6 35 chr2 99767745 99769004 -150918850 - L1PA10 LINE L1 -2 6166 4953 2143 118 0 0 chr2 99769004 99769309 -150918545 + AluSc SINE Alu 1 305 0 7930 120 6 35 chr2 99769309 99770088 -150917766 - L1PA10 LINE L1 -1215 4953 4154 10477 171 17 5 chr2 99770092 99772039 -150915815 - L1PA10 LINE L1 -2962 3184 1215 565 80 0 0 chr2 99772037 99772112 -150915742 + L1PA10 LINE L1 1469 1543 -4918 * 3570 214 29 23 chr2 99772112 99773906 -150913948 - L1P3 LINE L1 -4604 2977 1125 * 16322 152 24 8 chr2 99773904 99777676 -150910178 - L1PA12 LINE L1 -3757 3827 6 204 278 69 14 chr2 99777718 99777790 -150910064 - MIR SINE MIR -87 175 100 3155 193 88 8 chr2 99777968 99778669 -150909185 + L1PA12 LINE L1 5 1166 -6415 1229 244 39 4 chr2 99778673 99778952 -150908902 - L1P3 LINE L1 -6491 1090 802 266 216 0 113 chr2 99778952 99779049 -150908805 - L1P3 LINE L1 -6678 903 818 402 214 0 11 chr2 99779067 99779156 -150908698 - L1P3 LINE L1 -6680 901 814 491 257 57 73 chr2 99779169 99779831 -150908023 - L1PA12 LINE L1 -6407 1174 799 497 184 29 0 chr2 99779831 99779934 -150907920 - L1PA12 LINE L1 -6677 904 799 356 193 61 88 chr2 99779943 99780057 -150907797 - L1PA12 LINE L1 -6687 894 784 378 263 0 0 chr2 99780057 99780137 -150907717 - L1PA12 LINE L1 -6688 893 814 591 248 103 80 chr2 99780157 99780747 -150907107 - L1PA12 LINE L1 -6411 1170 799 591 230 253 37 chr2 99780760 99781056 -150906798 - L1PA12 LINE L1 -6408 1173 814 360 261 22 0 chr2 99781080 99781172 -150906682 - L1PA12 LINE L1 -6689 892 799 383 248 29 9 chr2 99781172 99781277 -150906577 - L1PA12 LINE L1 -6677 904 798 451 221 0 0 chr2 99781280 99781366 -150906488 - L1PA12 LINE L1 -6682 899 814 523 175 21 0 chr2 99781392 99781489 -150906365 - L1PA12 LINE L1 -6684 897 799 418 226 0 0 chr2 99781495 99781579 -150906275 - L1PA12 LINE L1 -6684 897 814 198 0 0 0 chr2 99781688 99781710 -150906144 + (GGAA)n Simple_repeat Simple_repeat 3 24 0 5696 155 31 12 chr2 99781710 99782756 -150905098 - L1 LINE L1 -1059 5087 4022 3426 212 19 23 chr2 99782744 99782883 -150904971 - L1M4 LINE L1 -1748 4398 4260 * 2040 159 0 3 chr2 99782883 99783191 -150904663 - AluSx SINE Alu -5 307 1 3426 212 19 23 chr2 99783191 99783877 -150903977 - L1M4 LINE L1 -1886 4260 3576 826 199 126 65 chr2 99784413 99784678 -150903176 + MLT2B1 LTR ERVL 184 519 -35 1661 115 0 0 chr2 99784678 99784896 -150902958 + AluSq SINE Alu 51 268 -45 826 199 126 65 chr2 99784896 99784914 -150902940 + MLT2B1 LTR ERVL 519 534 -20 205 160 40 53 chr2 99784914 99784989 -150902865 + (TCTCTG)n Simple_repeat Simple_repeat 2 75 0 23 78 0 0 chr2 99785017 99785068 -150902786 + AT_rich Low_complexity Low_complexity 1 51 0 261 182 182 0 chr2 99786705 99786771 -150901083 + MER5A DNA MER1_type 30 107 -82 326 172 0 0 chr2 99788572 99788630 -150899224 + MER5A DNA MER1_type 24 81 -108 278 225 169 0 chr2 99790436 99790507 -150897347 + MER5A DNA MER1_type 24 106 -83 24 0 0 0 chr2 99790707 99790731 -150897123 + AT_rich Low_complexity Low_complexity 1 24 0 325 153 167 0 chr2 99792337 99792409 -150895445 + MER5A DNA MER1_type 23 106 -83 339 129 171 0 chr2 99794219 99794289 -150893565 + MER5A DNA MER1_type 26 107 -82 213 138 379 0 chr2 99796091 99796149 -150891705 + MER5A DNA MER1_type 27 106 -83 584 157 87 0 chr2 99797489 99797604 -150890250 - FLAM_A SINE Alu -6 136 12 1138 77 0 0 chr2 99797627 99797770 -150890084 - U4 snRNA snRNA -2 143 1 792 165 0 0 chr2 99797786 99797913 -150889941 - FLAM_C SINE Alu -6 127 1 353 220 127 27 chr2 99797994 99798144 -150889710 - MIR SINE MIR -12 250 86 645 237 57 57 chr2 99798318 99798407 -150889447 - L1ME3A LINE L1 -40 6130 6042 3030 154 17 55 chr2 99798407 99798731 -150889123 - MER41D LTR ERV1 0 557 222 414 0 0 0 chr2 99798731 99798777 -150889077 + (TC)n Simple_repeat Simple_repeat 2 47 0 333 0 0 0 chr2 99798776 99798813 -150889041 + (TA)n Simple_repeat Simple_repeat 2 38 0 * 3030 154 17 55 chr2 99798777 99798813 -150889041 - MER41D LTR ERV1 -335 222 186 1956 149 0 7 chr2 99798813 99799114 -150888740 - AluJb SINE Alu -9 303 5 3030 154 17 55 chr2 99799114 99799294 -150888560 - MER41D LTR ERV1 -371 186 1 2387 71 24 0 chr2 99799294 99799589 -150888265 + AluY SINE Alu 1 302 -9 3030 154 17 55 chr2 99799589 99799603 -150888251 - MER41D LTR ERV1 -556 1 58 2078 140 0 0 chr2 99799603 99799903 -150887951 + AluJb SINE Alu 5 304 -8 3030 154 17 55 chr2 99799903 99799960 -150887894 - MER41D LTR ERV1 -498 59 1 645 237 57 57 chr2 99799960 99800115 -150887739 - L1ME3A LINE L1 -127 6043 5886 1156 119 12 0 chr2 99800300 99800468 -150887386 - AluSg/x SINE Alu -9 303 134 2633 57 0 0 chr2 99800469 99800770 -150887084 - AluY SINE Alu -10 301 1 568 179 131 14 chr2 99800770 99800915 -150886939 + MER65A LTR ERV1 257 418 -27 205 175 35 18 chr2 99801191 99801248 -150886606 + T-rich Low_complexity Low_complexity 3 60 0 1466 183 21 66 chr2 99801295 99801629 -150886225 + MLT1B LTR MaLR 1 319 -71 304 139 0 0 chr2 99801648 99801691 -150886163 + Tigger2 DNA MER2_type 15 57 -2661 2166 137 0 0 chr2 99801692 99801992 -150885862 - AluSx SINE Alu -12 300 1 874 198 82 17 chr2 99802084 99802316 -150885538 - MER45R DNA AcHobo 0 1581 1335 962 66 8 0 chr2 99802317 99802438 -150885416 - AluSq/x SINE Alu -191 122 1 263 57 0 0 chr2 99802438 99802473 -150885381 - MER45R DNA AcHobo -253 1328 1294 229 250 33 0 chr2 99802490 99802550 -150885304 + MLT1K LTR MaLR 525 586 -2 1826 184 0 0 chr2 99803248 99803542 -150884312 + AluJb SINE Alu 1 294 -18 715 188 21 7 chr2 99803591 99803735 -150884119 - AluJb SINE Alu 0 312 167 253 231 15 15 chr2 99804980 99805045 -150882809 + GA-rich Low_complexity Low_complexity 2 66 0 35 0 0 0 chr2 99807278 99807313 -150880541 + AT_rich Low_complexity Low_complexity 1 35 0 215 143 0 54 chr2 99807870 99807926 -150879928 + (TAAAAA)n Simple_repeat Simple_repeat 6 58 0 25 0 0 0 chr2 99808081 99808106 -150879748 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr2 99808197 99808229 -150879625 + AT_rich Low_complexity Low_complexity 1 32 0 1210 249 75 61 chr2 99808448 99808889 -150878965 + MLT1C LTR MaLR 17 463 -4 687 167 40 24 chr2 99808992 99809118 -150878736 + FLAM_C SINE Alu 1 128 -5 1657 153 35 31 chr2 99809169 99809457 -150878397 + AluJo SINE Alu 1 289 -23 41 66 0 0 chr2 99809661 99809737 -150878117 + AT_rich Low_complexity Low_complexity 1 76 0 228 221 35 18 chr2 99809783 99809896 -150877958 + HAL1 LINE L1 1009 1123 -1384 1971 135 4 0 chr2 99810452 99810774 -150877080 - AluSx SINE Alu 0 323 1 441 216 0 0 chr2 99811244 99811341 -150876513 - L1MA6 LINE L1 0 6300 6204 27 73 0 0 chr2 99811494 99811549 -150876305 + AT_rich Low_complexity Low_complexity 1 55 0 21 71 0 0 chr2 99811636 99811678 -150876176 + AT_rich Low_complexity Low_complexity 1 42 0 371 301 55 16 chr2 99811747 99811930 -150875924 + L1MC4a LINE L1 5678 5867 -1941 2213 111 0 0 chr2 99811933 99812221 -150875633 - AluSx SINE Alu -24 288 1 377 183 112 7 chr2 99812303 99812480 -150875374 + MER20 DNA MER1_type 1 219 0 396 195 59 59 chr2 99813011 99813129 -150874725 + MER103 DNA DNA 3 120 -46 23 0 0 0 chr2 99813499 99813522 -150874332 + AT_rich Low_complexity Low_complexity 1 23 0 222 288 34 0 chr2 99813731 99813790 -150874064 - L2 LINE L2 -21 3251 3191 2494 63 0 0 chr2 99815010 99815309 -150872545 + AluSq SINE Alu 1 299 -14 194 0 39 0 chr2 99815747 99815773 -150872081 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 241 212 45 61 chr2 99816107 99816173 -150871681 - L2 LINE L2 -7 3306 3242 244 182 20 141 chr2 99816231 99816330 -150871524 + MIR3 SINE MIR 86 172 -36 321 211 149 66 chr2 99817084 99817312 -150870542 + L1MC5 LINE L1 7392 7638 -323 979 202 0 6 chr2 99817975 99818158 -150869696 + FRAM SINE Alu 1 174 -2 1655 174 107 74 chr2 99818179 99818596 -150869258 + MLT1D LTR MaLR 2 439 -66 2354 68 3 14 chr2 99818596 99818892 -150868962 - AluY SINE Alu -18 293 1 1655 174 107 74 chr2 99818892 99818962 -150868892 + MLT1D LTR MaLR 439 505 0 785 170 73 0 chr2 99818988 99819153 -150868701 + MER5B DNA MER1_type 1 177 -1 1424 210 188 8 chr2 99819397 99820083 -150867771 - L1MC4 LINE L1 -142 7900 6907 2444 67 0 0 chr2 99820083 99820367 -150867487 - AluY SINE Alu -27 284 1 1424 210 188 8 chr2 99820367 99820419 -150867435 - L1MC4 LINE L1 -1135 6907 6866 299 275 134 28 chr2 99820429 99820571 -150867283 - MIR SINE MIR -86 176 20 888 185 25 0 chr2 99820599 99820761 -150867093 - AluJo SINE Alu -25 287 122 3013 176 121 161 chr2 99820762 99821163 -150866691 - L1MC4a LINE L1 -11 7797 7381 2169 133 0 0 chr2 99821163 99821464 -150866390 + AluSx SINE Alu 1 301 -11 3013 176 121 161 chr2 99821464 99821479 -150866375 - L1MC4a LINE L1 -427 7381 7367 1548 178 14 20 chr2 99821479 99821772 -150866082 + AluJb SINE Alu 1 291 -21 3013 176 121 161 chr2 99821772 99822726 -150865128 - L1MC4a LINE L1 -441 7367 6481 781 139 102 112 chr2 99830626 99830841 -150857013 + MER20 DNA MER1_type 4 216 -3 22 35 0 0 chr2 99832079 99832108 -150855746 + GC_rich Low_complexity Low_complexity 1 29 0 310 322 16 16 chr2 99833082 99833203 -150854651 - L3b LINE CR1 -283 1300 1180 824 143 0 8 chr2 99833819 99833945 -150853909 + LTR1B LTR ERV1 1 125 -701 821 99 0 0 chr2 99833944 99834055 -150853799 - MSTB LTR MaLR -315 111 1 * 633 141 0 10 chr2 99834633 99834732 -150853122 + MER4A LTR ERV1 1 98 -566 2976 106 0 7 chr2 99834732 99835139 -150852715 + MER4A LTR ERV1 261 664 0 202 225 0 0 chr2 99835220 99835260 -150852594 + L2 LINE L2 3235 3274 -39 1537 183 37 15 chr2 99835699 99836027 -150851827 - L1MB8 LINE L1 -11 6167 5833 761 176 7 0 chr2 99836031 99836167 -150851687 - L1MB8 LINE L1 -420 5754 5618 517 176 0 0 chr2 99836167 99836252 -150851602 + MSTA LTR MaLR 344 428 0 2744 156 9 0 chr2 99836252 99836756 -150851098 + MSTA-int LTR MaLR 1 507 -1144 322 317 41 0 chr2 99837022 99837167 -150850687 + L1M4 LINE L1 3583 3733 -2413 362 241 0 6 chr2 99837202 99837364 -150850490 + (TA)n Simple_repeat Simple_repeat 2 162 0 23 54 0 0 chr2 99837541 99837578 -150850276 + AT_rich Low_complexity Low_complexity 1 37 0 333 222 0 49 chr2 99837581 99837662 -150850192 - FAM SINE Alu 0 179 103 385 220 28 35 chr2 99837980 99838121 -150849733 - L1ME1 LINE L1 -3 6163 6024 274 317 0 14 chr2 99838720 99838865 -150848989 + (TA)n Simple_repeat Simple_repeat 1 143 0 34 24 0 0 chr2 99838896 99838937 -150848917 + AT_rich Low_complexity Low_complexity 1 41 0 830 181 0 0 chr2 99839589 99839727 -150848127 - AluSq SINE Alu -33 280 143 250 247 34 56 chr2 99840229 99840318 -150847536 + MLT2E LTR ERVL 45 131 -497 523 289 111 16 chr2 99842884 99843199 -150844655 + LTR16C LTR ERVL 69 413 -78 251 344 0 0 chr2 99843952 99844045 -150843809 + MIR SINE MIR 49 141 -67 763 289 137 40 chr2 99844394 99844847 -150843007 - MLT1D LTR MaLR 0 505 9 207 209 23 0 chr2 99844901 99844944 -150842910 + CT-rich Low_complexity Low_complexity 2 45 0 256 274 0 0 chr2 99845390 99845463 -150842391 + MER41A LTR ERV1 159 231 -323 756 222 81 120 chr2 99846215 99846470 -150841384 - MLT1A2 LTR MaLR -6 368 131 2404 76 0 0 chr2 99846470 99846795 -150841059 + AluY SINE Alu 2 311 0 756 222 81 120 chr2 99846795 99846922 -150840932 - MLT1A2 LTR MaLR -243 131 1 29 0 0 0 chr2 99848815 99848844 -150839010 + AT_rich Low_complexity Low_complexity 1 29 0 844 30 0 0 chr2 99848844 99848945 -150838909 - L1PA4 LINE L1 -3 6152 6052 3091 53 0 0 chr2 99848945 99849324 -150838530 + L1PA4 LINE L1 5680 6058 -97 2009 113 7 10 chr2 99853319 99853610 -150834244 + AluSx SINE Alu 1 290 -22 509 29 29 0 chr2 99853648 99853718 -150834136 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 1536 206 0 16 chr2 99853965 99854271 -150833583 + AluJb SINE Alu 5 305 -7 443 279 97 41 chr2 99855610 99855879 -150831975 - L1ME3 LINE L1 -1 6161 5878 675 274 60 32 chr2 99855887 99856289 -150831565 - L1MEc LINE L1 -4598 1798 1386 30 45 0 0 chr2 99856306 99856350 -150831504 + AT_rich Low_complexity Low_complexity 1 44 0 226 214 0 0 chr2 99857303 99857345 -150830509 - L1M3c LINE L1 -6099 42 1 473 281 118 30 chr2 99857478 99857681 -150830173 + MLT1G1 LTR MaLR 10 230 -365 726 268 42 82 chr2 99858084 99858535 -150829319 + L1MB8 LINE L1 4449 4881 -1265 1173 240 23 41 chr2 99858563 99858905 -150828949 - MLT1A1 LTR MaLR -29 336 1 395 284 32 44 chr2 99858936 99859186 -150828668 + L1MB8 LINE L1 4910 5156 -990 2248 125 0 0 chr2 99860421 99860733 -150827121 + AluSx SINE Alu 1 312 0 399 249 76 91 chr2 99860734 99860931 -150826923 + MER21B LTR ERV1 301 494 -369 189 0 0 0 chr2 99860932 99860953 -150826901 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 21 0 0 0 chr2 99862005 99862026 -150825828 + AT_rich Low_complexity Low_complexity 1 21 0 1832 236 34 14 chr2 99862603 99863108 -150824746 + L1MB8 LINE L1 5553 6067 -111 1743 142 20 28 chr2 99863113 99863458 -150824396 - MER4A LTR ERV1 0 664 262 467 186 29 10 chr2 99863454 99863556 -150824298 - MER4A LTR ERV1 -560 104 1 * 4973 171 21 2 chr2 99863943 99864867 -150822987 + L1MA3 LINE L1 5365 6305 0 243 0 0 0 chr2 99864879 99864906 -150822948 + (CA)n Simple_repeat Simple_repeat 2 28 0 2285 112 3 0 chr2 99865176 99865488 -150822366 + AluSp SINE Alu 1 313 0 21 0 0 0 chr2 99865825 99865846 -150822008 + AT_rich Low_complexity Low_complexity 1 21 0 291 157 171 0 chr2 99867393 99867463 -150820391 + MER5A DNA MER1_type 26 107 -82 312 186 0 0 chr2 99869255 99869314 -150818540 + MER5A DNA MER1_type 23 81 -108 272 239 14 0 chr2 99871122 99871193 -150816661 + MER5A DNA MER1_type 9 80 -109 307 181 167 0 chr2 99873012 99873084 -150814770 + MER5A DNA MER1_type 23 106 -83 241 189 19 0 chr2 99874893 99874946 -150812908 + MER5A DNA MER1_type 26 79 -110 296 167 0 0 chr2 100076409 100076457 -150611397 - MER45 DNA AcHobo -49 1532 1485 2107 125 3 0 chr2 100076457 100076793 -150611061 + AluSx SINE Alu 6 342 0 571 299 56 8 chr2 100077425 100077659 -150610195 + L1M4 LINE L1 2458 2702 -3444 303 277 12 0 chr2 100077662 100077745 -150610109 + L1M4 LINE L1 5191 5274 -872 656 79 30 40 chr2 100077745 100077846 -150610008 + AluSp SINE Alu 25 124 -189 331 154 62 15 chr2 100077946 100078011 -150609843 - AluS SINE Alu -235 68 1 2045 137 0 10 chr2 100078142 100078441 -150609413 + AluSx SINE Alu 1 296 -16 300 87 0 0 chr2 100078642 100078688 -150609166 - AluSq SINE Alu 0 301 256 1334 125 10 10 chr2 100078688 100078880 -150608974 - AluSq SINE Alu -121 192 1 2463 102 51 23 chr2 100080320 100080674 -150607180 + THE1B LTR MaLR 1 364 0 1765 139 20 34 chr2 100081159 100081344 -150606510 - AluJb SINE Alu -22 290 109 2338 116 41 41 chr2 100081344 100081707 -150606147 - THE1B LTR MaLR 0 364 2 1765 139 20 34 chr2 100081707 100081815 -150606039 - AluJb SINE Alu -203 109 1 201 227 0 61 chr2 100081987 100082024 -150605830 + MER5B DNA MER1_type 1 34 -144 2164 125 0 0 chr2 100082024 100082327 -150605527 - AluSx SINE Alu -9 303 1 201 227 0 61 chr2 100082327 100082355 -150605499 + MER5B DNA MER1_type 34 62 -116 1192 98 6 29 chr2 100082763 100082937 -150604917 - AluSg/x SINE Alu -20 290 121 1974 118 4 11 chr2 100082945 100083225 -150604629 - AluSc SINE Alu -31 278 1 1157 109 63 0 chr2 100083287 100083461 -150604393 + L1MA3 LINE L1 6121 6305 0 270 321 57 50 chr2 100083489 100083648 -150604206 + MIR SINE MIR 49 208 -54 315 241 21 90 chr2 100083761 100083906 -150603948 - L2 LINE L2 -11 3302 3168 2256 47 14 14 chr2 100085464 100085761 -150602093 + AluY SINE Alu 1 297 -14 1511 155 169 3 chr2 100085810 100086094 -150601760 + MER7A DNA MER2_type 2 330 -16 1628 149 3 17 chr2 100086101 100086389 -150601465 - AluJb SINE Alu -11 301 18 1131 150 0 0 chr2 100088012 100088185 -150599669 - AluSg/x SINE Alu -12 298 126 2381 89 0 6 chr2 100088293 100088606 -150599248 - AluSx SINE Alu -1 311 1 1904 148 7 0 chr2 100088637 100088927 -150598927 - AluJb SINE Alu -20 292 1 732 284 139 17 chr2 100089141 100089486 -150598368 + L3 LINE CR1 1010 1396 -181 2031 104 26 42 chr2 100089610 100089918 -150597936 - AluSx SINE Alu -9 303 1 1610 159 7 36 chr2 100090210 100090519 -150597335 + AluJo SINE Alu 1 300 -12 2400 84 0 3 chr2 100090530 100090840 -150597014 + AluSc SINE Alu 1 309 0 1967 142 3 7 chr2 100091239 100091542 -150596312 + AluSx SINE Alu 1 302 -10 343 264 45 87 chr2 100092034 100092276 -150595578 + MER102b DNA MER1_type 84 315 -26 641 144 0 0 chr2 100092573 100092670 -150595184 - Alu SINE Alu -1 309 213 207 318 23 23 chr2 100092953 100093041 -150594813 - L2 LINE L2 -1 3271 3184 1463 266 62 9 chr2 100093091 100093530 -150594324 - MLT1C LTR MaLR 0 467 6 446 289 50 11 chr2 100093715 100093895 -150593959 - MIR SINE MIR -30 232 46 2882 100 7 7 chr2 100094073 100094494 -150593360 + L1PBa LINE L1 1387 1807 -5056 1965 107 158 75 chr2 100094494 100094867 -150592987 - MER4A LTR ERV1 0 664 261 644 103 21 10 chr2 100094867 100094964 -150592890 - MER4A LTR ERV1 -566 98 1 4352 82 71 79 chr2 100094965 100095737 -150592117 - MER4A-int LTR ERV1 0 6598 5833 2083 85 10 14 chr2 100095891 100096184 -150591670 - AluY SINE Alu -15 296 5 396 282 10 0 chr2 100096188 100096291 -150591563 + L1MC4a LINE L1 5440 5543 -2265 1814 253 143 40 chr2 100096305 100097323 -150590531 + L1MC4a LINE L1 5690 6812 -996 407 78 0 0 chr2 100097362 100097413 -150590441 - AluY SINE Alu -20 290 240 1615 81 0 0 chr2 100097413 100097611 -150590243 - AluY SINE Alu -113 198 1 1763 92 4 0 chr2 100097641 100097868 -150589986 - AluY SINE Alu -83 228 1 266 268 0 0 chr2 100097897 100097953 -150589901 + polypyrimidine Low_complexity Low_complexity 3 58 0 540 220 28 50 chr2 100097953 100098094 -150589760 + L2 LINE L2 3176 3313 0 237 262 0 16 chr2 100098210 100098271 -150589583 + MER5A DNA MER1_type 9 68 -121 1002 98 0 14 chr2 100098280 100098423 -150589431 + AluY SINE Alu 1 141 -170 301 281 91 33 chr2 100098590 100098711 -150589143 - L2 LINE L2 -8 3264 3137 1689 184 3 13 chr2 100099606 100099905 -150587949 - AluJo SINE Alu -16 296 1 1249 218 51 20 chr2 100100110 100100591 -150587263 - MLT1E LTR MaLR -1 592 3 843 169 35 7 chr2 100101630 100101772 -150586082 + FRAM SINE Alu 20 165 -11 1624 131 11 40 chr2 100102334 100102609 -150585245 + AluJo SINE Alu 1 267 -45 378 282 51 26 chr2 100102915 100103071 -150584783 + MER90-int LTR ERV1 1892 2051 -2596 409 360 50 17 chr2 100103113 100103413 -150584441 + MER90-int LTR ERV1 6322 6631 -170 2476 176 77 14 chr2 100103579 100104097 -150583757 + MER90 LTR ERV1 1 551 -63 5964 130 30 50 chr2 100104490 100104677 -150583177 - L1MA3 LINE L1 0 7724 7535 1643 157 4 11 chr2 100104677 100104938 -150582916 + AluJo SINE Alu 38 296 -16 5964 130 30 50 chr2 100104938 100106033 -150581821 - L1MA3 LINE L1 -189 7535 6460 183 80 0 0 chr2 100106033 100106058 -150581796 + (TTCTC)n Simple_repeat Simple_repeat 3 27 0 1286 182 8 8 chr2 100106074 100106310 -150581544 - AluJo SINE Alu -3 309 74 3269 142 19 2 chr2 100106312 100106849 -150581005 - L1MA3 LINE L1 -1095 6470 5925 1969 97 0 4 chr2 100106851 100107109 -150580745 - AluSp SINE Alu 0 313 57 4525 127 191 33 chr2 100107109 100108092 -150579762 + MER11B LTR ERVK 3 1231 -5 362 160 27 12 chr2 100108095 100108177 -150579677 - AluS SINE Alu -239 64 1 7339 186 30 26 chr2 100108177 100108572 -150579282 - L1MA3 LINE L1 -1650 5915 5523 1986 128 10 10 chr2 100108572 100108870 -150578984 - AluSx SINE Alu -14 298 1 7339 186 30 26 chr2 100108870 100109189 -150578665 - L1MA3 LINE L1 -2042 5523 5207 1992 156 0 19 chr2 100109189 100109504 -150578350 - AluSx SINE Alu -3 309 1 7339 186 30 26 chr2 100109504 100109629 -150578225 - L1MA3 LINE L1 -2358 5207 5084 1760 161 46 67 chr2 100109629 100110001 -150577853 - THE1B LTR MaLR 0 364 1 7339 186 30 26 chr2 100110001 100111118 -150576736 - L1MA3 LINE L1 -2481 5084 3340 261 75 0 0 chr2 100111133 100111173 -150576681 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1245 68 0 0 chr2 100111173 100111321 -150576533 - AluY SINE Alu -32 279 132 10347 179 25 31 chr2 100111321 100112610 -150575244 - L1MA3 LINE L1 -4221 3344 2049 2451 121 113 15 chr2 100112610 100113000 -150574854 - MSTA LTR MaLR 0 428 1 10347 179 25 31 chr2 100113000 100114170 -150573684 - L1MA3 LINE L1 -5516 2049 221 2753 144 113 11 chr2 100114176 100114628 -150573226 - MER1A DNA MER1_type 0 529 32 288 0 0 0 chr2 100114632 100114664 -150573190 + (T)n Simple_repeat Simple_repeat 1 32 0 26 64 0 0 chr2 100114680 100114727 -150573127 + AT_rich Low_complexity Low_complexity 1 47 0 335 289 96 20 chr2 100114797 100114994 -150572860 - L1ME4a LINE L1 -171 5950 5739 1090 183 30 0 chr2 100115019 100115221 -150572633 - L1MA3 LINE L1 -7342 223 16 1295 172 108 3 chr2 100115394 100115735 -150572119 + L1MC3 LINE L1 7223 7785 0 2285 108 0 0 chr2 100115747 100116043 -150571811 + AluSx SINE Alu 1 296 -16 4197 213 66 41 chr2 100116091 100116559 -150571295 + L1MD2 LINE L1 4367 4822 -1537 2166 118 3 3 chr2 100116559 100116863 -150570991 + AluSx SINE Alu 3 306 -6 4197 213 66 41 chr2 100116863 100118201 -150569653 + L1MD2 LINE L1 4822 6224 -135 868 127 14 21 chr2 100118201 100118343 -150569511 + AluJo SINE Alu 1 141 -171 2312 94 13 3 chr2 100118345 100118652 -150569202 + AluSg SINE Alu 1 310 0 569 239 136 0 chr2 100118838 100118993 -150568861 - MER58A DNA MER1_type -48 176 1 2220 80 18 0 chr2 100119557 100119843 -150568011 + AluY SINE Alu 1 291 -20 3770 151 116 23 chr2 100119865 100120164 -150567690 - L1MA6 LINE L1 0 6300 6030 2089 95 39 3 chr2 100120164 100120449 -150567405 - AluSx SINE Alu -17 295 1 3770 151 116 23 chr2 100120449 100120902 -150566952 - L1MA6 LINE L1 -270 6030 5478 228 133 67 33 chr2 100120890 100120950 -150566904 - L1PA16 LINE L1 0 6166 6105 * 528 179 188 51 chr2 100120966 100121083 -150566771 - FLAM_C SINE Alu 0 133 1 2045 160 33 28 chr2 100121254 100121613 -150566241 - THE1B LTR MaLR -2 430 1 541 100 0 0 chr2 100121613 100121693 -150566161 - THE1B-int LTR MaLR 0 1580 1501 1216 69 6 6 chr2 100121693 100121852 -150566002 - AluY SINE Alu -152 159 1 1105 161 6 0 chr2 100121863 100122031 -150565823 - THE1B LTR MaLR -192 172 4 318 211 211 31 chr2 100122034 100122162 -150565692 + L2 LINE L2 2572 2722 -592 2064 121 7 0 chr2 100122706 100123003 -150564851 - AluSx SINE Alu -13 299 1 297 146 18 0 chr2 100123308 100123363 -150564491 + MSTC LTR MaLR 373 428 0 3868 132 9 46 chr2 100123366 100123495 -150564359 + L1MB1 LINE L1 5495 5627 -541 2018 113 21 3 chr2 100123495 100123786 -150564068 + AluSq SINE Alu 3 298 -15 3868 132 9 46 chr2 100123786 100124310 -150563544 + L1MB1 LINE L1 5627 6124 -44 2343 59 21 0 chr2 100124316 100124606 -150563248 + L1PA13 LINE L1 5865 6160 -3 329 276 60 94 chr2 100124608 100125554 -150562300 - L1M4 LINE L1 -3105 3041 2128 1864 140 0 14 chr2 100125655 100125941 -150561913 - AluSx SINE Alu -30 282 1 584 203 152 25 chr2 100126059 100126217 -150561637 + MER5A DNA MER1_type 9 186 -3 2022 133 14 3 chr2 100126247 100126540 -150561314 + AluJb SINE Alu 1 296 -16 272 216 10 41 chr2 100126633 100126730 -150561124 + C-rich Low_complexity Low_complexity 2 95 0 480 161 0 0 chr2 100126830 100126917 -150560937 + L1M4 LINE L1 5219 5305 -841 2167 124 16 0 chr2 100126921 100127228 -150560626 + AluSx SINE Alu 1 312 0 1686 199 0 13 chr2 100127243 100127559 -150560295 + AluJo SINE Alu 1 312 0 224 259 35 71 chr2 100127742 100127827 -150560027 + L2 LINE L2 3230 3311 -2 1740 181 147 19 chr2 100128118 100128581 -150559273 + Charlie1b DNA MER1_type 1 522 -1 1906 134 21 0 chr2 100129113 100129404 -150558450 + AluSx SINE Alu 1 297 -15 207 0 0 0 chr2 100130242 100130265 -150557589 + (CAA)n Simple_repeat Simple_repeat 2 24 0 739 120 24 48 chr2 100130517 100130642 -150557212 + FLAM_A SINE Alu 17 138 -4 2208 56 16 39 chr2 100130864 100131170 -150556684 + AluSp SINE Alu 1 299 -14 459 134 0 0 chr2 100131172 100131254 -150556600 + (TA)n Simple_repeat Simple_repeat 1 82 0 804 152 29 73 chr2 100131736 100131940 -150555914 - AluJb SINE Alu -22 290 96 186 246 77 0 chr2 100131982 100132047 -150555807 - MIR SINE MIR -57 151 82 2378 84 3 3 chr2 100133029 100133328 -150554526 + AluSq SINE Alu 1 299 -14 801 142 0 64 chr2 100133687 100133828 -150554026 + FLAM_A SINE Alu 2 133 0 2078 113 0 0 chr2 100134040 100134306 -150553548 + AluSx SINE Alu 15 280 -32 277 341 18 24 chr2 100134356 100134520 -150553334 + MIR3 SINE MIR 32 194 -14 1758 154 7 7 chr2 100135290 100135570 -150552284 - AluJo SINE Alu -12 300 21 1082 127 51 41 chr2 100135637 100135834 -150552020 - L1PA16 LINE L1 0 6166 5968 7736 20 1 1 chr2 100135912 100136977 -150550877 + L1PA3 LINE L1 5123 6187 0 1921 159 3 13 chr2 100137337 100137639 -150550215 + AluJb SINE Alu 1 299 -13 2471 75 7 0 chr2 100137679 100137987 -150549867 + AluSp SINE Alu 1 310 -3 561 294 68 5 chr2 100137987 100138208 -150549646 + L2 LINE L2 2545 2779 -535 282 116 0 0 chr2 100138309 100138352 -150549502 + (TCTA)n Simple_repeat Simple_repeat 2 44 0 309 327 58 39 chr2 100138433 100138690 -150549164 + L2 LINE L2 2268 2529 -785 272 152 22 0 chr2 100138949 100138995 -150548859 + L2 LINE L2 3267 3313 0 202 267 0 0 chr2 100138995 100139040 -150548814 + (TGAG)n Simple_repeat Simple_repeat 2 46 0 1266 264 71 35 chr2 100141241 100141647 -150546207 - LTR16C LTR ERVL 0 491 71 2292 80 7 26 chr2 100141889 100142191 -150545663 - AluSp SINE Alu -17 296 1 1910 172 0 3 chr2 100142436 100142733 -150545121 + AluJb SINE Alu 1 296 -16 2196 144 139 15 chr2 100142815 100143224 -150544630 - LTR46 LTR ERV1 0 460 1 208 135 0 0 chr2 100143235 100143272 -150544582 + (A)n Simple_repeat Simple_repeat 1 37 0 693 172 0 73 chr2 100143494 100143645 -150544209 - MER21-int LTR ERV1 -2395 1796 1657 606 235 24 48 chr2 100143681 100143726 -150544128 - MER21-int LTR ERV1 -2384 1807 1762 2146 115 3 0 chr2 100143726 100144013 -150543841 + AluSx SINE Alu 1 288 -24 606 235 24 48 chr2 100144013 100144133 -150543721 - MER21-int LTR ERV1 -2429 1762 1646 2033 185 37 92 chr2 100144216 100144696 -150543158 - MER21-int LTR ERV1 -2554 1637 1193 1850 111 15 84 chr2 100144696 100145029 -150542825 - AluSq SINE Alu 0 313 4 2033 185 37 92 chr2 100145029 100145121 -150542733 - MER21-int LTR ERV1 -2998 1193 1097 1082 163 0 0 chr2 100146825 100146978 -150540876 - FRAM SINE Alu -12 154 2 823 257 95 5 chr2 100148988 100149210 -150538644 - MIR SINE MIR -10 252 11 441 218 61 54 chr2 100150337 100150484 -150537370 + MIR SINE MIR 86 233 -29 1625 199 26 101 chr2 100151037 100151571 -150536283 + L1ME LINE L1 5329 5822 -340 846 187 18 50 chr2 100151711 100151930 -150535924 - L1MD3 LINE L1 -1 7994 7783 1210 158 0 5 chr2 100152151 100152335 -150535519 - AluSx SINE Alu -129 183 1 2352 82 3 3 chr2 100152399 100152702 -150535152 + AluY SINE Alu 1 303 -8 36 40 0 0 chr2 100154335 100154385 -150533469 + AT_rich Low_complexity Low_complexity 1 50 0 607 140 37 118 chr2 100154414 100154550 -150533304 + AluJb SINE Alu 1 125 -187 1700 234 192 4 chr2 100154571 100155113 -150532741 - L1MC4 LINE L1 -41 8001 7358 1974 166 0 0 chr2 100155152 100155454 -150532400 + AluJo SINE Alu 1 302 -10 1436 273 25 64 chr2 100156371 100156981 -150530873 + L1M4b LINE L1 10 717 -6142 965 89 8 0 chr2 100156986 100157110 -150530744 + AluSc SINE Alu 1 125 -184 616 254 149 22 chr2 100157116 100157268 -150530586 + L1M4b LINE L1 738 869 -5990 1972 142 3 0 chr2 100157268 100157556 -150530298 + AluSx SINE Alu 1 289 -23 616 254 149 22 chr2 100157556 100157679 -150530175 + L1M4b LINE L1 869 1048 -5811 894 146 0 0 chr2 100157680 100157817 -150530037 + FLAM_C SINE Alu 1 137 -6 1952 197 66 80 chr2 100157818 100158403 -150529451 + L1M4b LINE L1 1046 2010 -4868 2279 80 3 6 chr2 100158403 100158714 -150529140 + AluY SINE Alu 1 310 -1 1952 197 66 80 chr2 100158714 100158848 -150529006 + L1M4b LINE L1 2010 2144 -4734 1464 165 28 31 chr2 100158991 100159282 -150528572 + AluJo SINE Alu 1 290 -22 2797 67 3 3 chr2 100159574 100159931 -150527923 - L1PA6 LINE L1 -312 5842 5486 31750 96 2 8 chr2 100159940 100164172 -150523682 + HERVK9 LTR ERVK 982 5186 -730 558 327 0 0 chr2 100164147 100164361 -150523493 + HERVK9 LTR ERVK 5976 6189 -1764 * 3352 110 0 2 chr2 100164374 100164827 -150523027 + HERVK9 LTR ERVK 5183 5634 -282 2271 129 7 12 chr2 100164852 100165205 -150522649 + HERVK9 LTR ERVK 5608 5916 0 2645 118 80 5 chr2 100165207 100165647 -150522207 + MER9 LTR ERVK 4 476 -35 5289 93 26 3 chr2 100165748 100166486 -150521368 - MER41-int LTR ERV1 -808 5138 4384 6716 113 6 4 chr2 100166486 100167218 -150520636 + L1PB1 LINE L1 5042 5782 -369 315 113 0 0 chr2 100167218 100167271 -150520583 + (TA)n Simple_repeat Simple_repeat 2 54 0 6716 113 6 4 chr2 100167271 100167641 -150520213 + L1PB1 LINE L1 5782 6150 -1 23 33 0 0 chr2 100167666 100167696 -150520158 + AT_rich Low_complexity Low_complexity 1 30 0 1247 154 184 0 chr2 100167703 100167969 -150519885 + MER33 DNA MER1_type 8 322 -2 196 293 52 0 chr2 100168169 100168220 -150519634 - MIR3 SINE MIR -1 207 154 283 291 134 37 chr2 100168220 100168354 -150519500 + MIR3 SINE MIR 1 147 -61 1095 217 113 64 chr2 100169207 100169301 -150518553 + MSTD LTR MaLR 6 94 -302 1926 142 3 16 chr2 100169301 100169604 -150518250 + AluJb SINE Alu 5 303 -9 1095 217 113 64 chr2 100169604 100169882 -150517972 + MSTD LTR MaLR 94 396 0 9933 189 120 35 chr2 100170175 100171093 -150516761 + L1PA16 LINE L1 1872 2711 -3455 1893 143 31 0 chr2 100171093 100171379 -150516475 + AluSx SINE Alu 3 297 -15 9933 189 120 35 chr2 100171379 100174016 -150513838 + L1PA16 LINE L1 2711 5809 -357 12654 78 2 15 chr2 100174016 100176035 -150511819 + L1PA7 LINE L1 3768 5774 -380 2416 86 0 3 chr2 100176035 100176339 -150511515 + AluY SINE Alu 1 303 -8 12654 78 2 15 chr2 100176339 100176714 -150511140 + L1PA7 LINE L1 5774 6152 -2 9933 189 120 35 chr2 100176714 100177077 -150510777 + L1PA16 LINE L1 5809 6140 -26 442 153 35 24 chr2 100177231 100177316 -150510538 + L1M4 LINE L1 5401 5486 -698 1517 101 5 5 chr2 100177316 100177523 -150510331 + AluSg/x SINE Alu 93 299 -11 1443 171 0 16 chr2 100177523 100177780 -150510074 + MER2 DNA MER2_type 90 342 -3 1014 163 20 13 chr2 100178410 100178563 -150509291 - FRAM SINE Alu -12 154 1 634 189 4 47 chr2 100178692 100178834 -150509020 + FLAM_C SINE Alu 2 141 -2 2202 107 3 3 chr2 100178875 100179175 -150508679 - AluSp SINE Alu -13 300 1 276 297 112 31 chr2 100179210 100179469 -150508385 - L1ME4a LINE L1 -2 6119 5840 1940 130 0 4 chr2 100179533 100179809 -150508045 - AluSx SINE Alu -4 308 34 483 194 0 0 chr2 100180284 100180377 -150507477 + AluJ/FLAM SINE Alu 2 94 -218 430 141 113 169 chr2 100180378 100180455 -150507399 + AluJo SINE Alu 2 69 -243 1732 158 10 34 chr2 100180455 100180752 -150507102 + AluJo SINE Alu 1 290 -22 430 141 113 169 chr2 100180752 100180816 -150507038 + AluJo SINE Alu 69 135 -177 1093 162 0 12 chr2 100180845 100181018 -150506836 + AluJo SINE Alu 122 292 -20 360 176 15 0 chr2 100181199 100181267 -150506587 - MLT1D LTR MaLR -7 498 430 530 184 184 79 chr2 100181294 100181522 -150506332 - MLT1D LTR MaLR -213 292 41 350 135 0 0 chr2 100181582 100181634 -150506220 + Alu SINE Alu 1 52 -250 879 129 0 23 chr2 100181636 100181768 -150506086 + AluJo/FRAM SINE Alu 166 294 -18 386 163 139 0 chr2 100181977 100182063 -150505791 - MIR SINE MIR -76 186 89 2053 146 10 0 chr2 100182069 100182371 -150505483 + AluSx SINE Alu 5 309 -3 828 97 0 0 chr2 100182394 100182497 -150505357 - AluSq/x SINE Alu -209 103 1 195 42 0 0 chr2 100182512 100182536 -150505318 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 343 111 0 0 chr2 100182538 100182583 -150505271 - Alu SINE Alu -18 284 240 1682 151 8 8 chr2 100182666 100182931 -150504923 - AluJb SINE Alu -19 293 29 270 147 39 39 chr2 100182959 100183048 -150504806 + T-rich Low_complexity Low_complexity 3 94 -10 2322 67 32 0 chr2 100183048 100183331 -150504523 + AluY SINE Alu 1 292 -19 270 147 39 39 chr2 100183331 100183343 -150504511 + T-rich Low_complexity Low_complexity 93 104 0 252 86 0 0 chr2 100183437 100183472 -150504382 + (CA)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr2 100183562 100183587 -150504267 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 100184688 100184716 -150503138 + AT_rich Low_complexity Low_complexity 1 28 0 387 239 7 14 chr2 100184906 100185044 -150502810 + GA-rich Low_complexity Low_complexity 4 140 0 472 231 141 32 chr2 100185142 100185298 -150502556 - MER58A DNA MER1_type -48 176 4 1931 189 16 16 chr2 100185801 100186188 -150501666 + MER74A LTR ERVL 161 547 -11 1025 74 7 0 chr2 100186196 100186344 -150501510 + (TAGA)n Simple_repeat Simple_repeat 4 152 0 2125 137 0 0 chr2 100186831 100187124 -150500730 + AluSx SINE Alu 3 295 -17 1282 106 8 91 chr2 100187665 100187929 -150499925 + L1MA7 LINE L1 6050 6291 0 448 276 187 17 chr2 100188454 100188817 -150499037 - L1ME LINE L1 -2055 4025 3600 250 208 0 0 chr2 100188819 100188872 -150498982 - L1ME LINE L1 -3161 2919 2867 25 75 0 0 chr2 100188874 100188927 -150498927 + AT_rich Low_complexity Low_complexity 1 53 0 2115 121 10 22 chr2 100188927 100189241 -150498613 + AluSx SINE Alu 1 310 -2 1093 249 19 9 chr2 100189251 100189356 -150498498 - L1ME LINE L1 -3216 2864 2761 1705 169 29 26 chr2 100189356 100189664 -150498190 - AluJo SINE Alu -3 309 1 1093 249 19 9 chr2 100189664 100189883 -150497971 - L1ME LINE L1 -3319 2761 2537 954 109 30 6 chr2 100189886 100190051 -150497803 - Charlie5 DNA MER1_type -27 2585 2417 2269 102 0 13 chr2 100190058 100190362 -150497492 - AluSx SINE Alu -12 300 1 2055 197 76 11 chr2 100190362 100190809 -150497045 + L1ME3 LINE L1 5581 6056 -106 1019 231 36 47 chr2 100190804 100191164 -150496690 - L1ME LINE L1 -5177 893 538 * 240 35 0 0 chr2 100191176 100191205 -150496649 + (GGAA)n Simple_repeat Simple_repeat 1 29 0 2859 198 28 7 chr2 100191227 100191809 -150496045 + L1PA15-16 LINE L1 1980 2573 -4276 * 15655 22 3 0 chr2 100191806 100193632 -150494222 - L1P LINE L1 -1911 4235 2405 7592 27 1 0 chr2 100193631 100194518 -150493336 + L1P LINE L1 4236 5123 -1023 * 1970 69 19 8 chr2 100194618 100194879 -150492975 - AluY SINE Alu -47 264 1 615 264 12 6 chr2 100194881 100195044 -150492810 - L1 LINE L1 -1196 4950 4787 288 0 0 0 chr2 100195064 100195096 -150492758 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2154 136 0 0 chr2 100195102 100195396 -150492458 - AluSx SINE Alu -18 294 1 387 190 178 31 chr2 100195438 100195601 -150492253 - L1MC5 LINE L1 -48 7913 7727 24 77 0 0 chr2 100195603 100195655 -150492199 + AT_rich Low_complexity Low_complexity 1 52 0 2057 128 7 13 chr2 100195967 100196271 -150491583 + AluSx SINE Alu 1 302 -10 1841 141 24 20 chr2 100196322 100196619 -150491235 + AluJb SINE Alu 1 298 -14 26 74 0 0 chr2 100197050 100197104 -150490750 + AT_rich Low_complexity Low_complexity 1 54 0 2065 86 100 0 chr2 100197249 100197529 -150490325 - AluY SINE Alu -3 308 1 1972 164 0 3 chr2 100197654 100197966 -150489888 - AluJo SINE Alu -1 311 1 301 192 37 8 chr2 100198112 100198253 -150489601 - MER5A DNA MER1_type -79 110 9 310 145 50 57 chr2 100199545 100199635 -150488219 - MLT1H1 LTR MaLR 0 555 416 384 199 216 34 chr2 100199636 100199890 -150487964 - MLT1H1 LTR MaLR -247 308 10 382 200 110 0 chr2 100200205 100200305 -150487549 + Charlie2a DNA MER1_type 1120 1230 -1632 5829 134 80 5 chr2 100200324 100201558 -150486296 - L1MA6 LINE L1 0 6300 4958 235 212 117 7 chr2 100201566 100201703 -150486151 + Charlie2a DNA MER1_type 1210 1361 -1501 535 117 0 0 chr2 100201706 100201783 -150486071 + AluJ/FLAM SINE Alu 2 78 -234 2536 190 81 53 chr2 100201797 100202348 -150485506 - L1ME1 LINE L1 -199 5967 5433 2095 125 3 13 chr2 100202348 100202661 -150485193 - AluSx SINE Alu -2 310 1 2536 190 81 53 chr2 100202661 100202852 -150485002 - L1ME1 LINE L1 -733 5433 5249 2307 112 3 0 chr2 100202852 100203156 -150484698 - AluSp SINE Alu -8 305 1 2536 190 81 53 chr2 100203156 100203185 -150484669 - L1ME1 LINE L1 -917 5249 5222 1291 151 211 16 chr2 100203185 100203436 -150484418 - AluSx SINE Alu -2 300 1 713 255 20 0 chr2 100203502 100203655 -150484199 - AluJb SINE Alu -28 284 129 222 189 0 0 chr2 100203655 100203692 -150484162 + polypyrimidine Low_complexity Low_complexity 2 38 0 1286 116 5 24 chr2 100204026 100204233 -150483621 + L1PA6 LINE L1 5946 6148 -6 7443 80 7 16 chr2 100204237 100205224 -150482630 - HERVK9 LTR ERVK -4938 978 1 2977 118 68 8 chr2 100205224 100205706 -150482148 - MER9 LTR ERVK 0 511 1 1210 127 59 45 chr2 100206456 100206530 -150481324 - MER30 DNA MER1_type -6 224 152 370 61 30 15 chr2 100206530 100206596 -150481258 + (TTTA)n Simple_repeat Simple_repeat 4 70 0 2225 102 0 0 chr2 100206599 100206882 -150480972 - AluSp SINE Alu -30 283 1 1210 127 59 45 chr2 100206882 100207024 -150480830 - MER30 DNA MER1_type -79 151 1 1605 258 127 10 chr2 100207024 100207640 -150480214 + HAL1 LINE L1 1447 2134 -373 349 189 19 94 chr2 100208069 100208175 -150479679 - MER67C LTR ERV1 -197 513 416 1319 184 0 0 chr2 100208196 100208419 -150479435 + AluJb SINE Alu 88 310 -2 533 225 64 64 chr2 100208420 100208633 -150479221 - MER67C LTR ERV1 -208 532 137 551 203 0 114 chr2 100208842 100208965 -150478889 - MER81 DNA DNA 0 114 6 231 270 16 0 chr2 100209084 100209147 -150478707 + MIR SINE MIR 41 104 -158 1520 110 53 20 chr2 100209159 100209404 -150478450 + MER2 DNA MER2_type 1 253 -92 705 174 33 0 chr2 100209410 100209531 -150478323 - FRAM SINE Alu -15 161 37 357 181 83 0 chr2 100209536 100209608 -150478246 + MER2 DNA MER2_type 267 344 -1 2544 57 0 0 chr2 100209778 100210078 -150477776 - AluY SINE Alu -11 300 1 2131 87 132 9 chr2 100210158 100210492 -150477362 + THE1C LTR MaLR 1 375 0 952 131 44 22 chr2 100211066 100211249 -150476605 - MER53 DNA DNA 0 189 3 1940 139 0 60 chr2 100212212 100212528 -150475326 + AluJb SINE Alu 2 298 -14 891 241 38 17 chr2 100212601 100212838 -150475016 + LTR43 LTR ERV1 176 417 -185 2046 133 3 0 chr2 100213301 100213618 -150474236 - AluSx SINE Alu 0 318 1 194 254 55 45 chr2 100213746 100213856 -150473998 + MIR SINE MIR 57 167 -95 311 350 156 11 chr2 100214238 100214418 -150473436 - MIR SINE MIR -3 259 54 2227 107 10 0 chr2 100215465 100215775 -150472079 + AluSq SINE Alu 1 313 0 223 316 0 0 chr2 100216029 100216108 -150471746 + G-rich Low_complexity Low_complexity 1 79 0 2477 75 3 3 chr2 100216737 100217043 -150470811 - AluSx SINE Alu -6 306 1 234 0 0 0 chr2 100217662 100217688 -150470166 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1661 152 42 4 chr2 100217695 100217958 -150469896 - AluJb SINE Alu -31 281 9 229 188 21 0 chr2 100218413 100218461 -150469393 + L2 LINE L2 3262 3310 -3 2107 111 35 0 chr2 100218584 100218873 -150468981 + AluSg SINE Alu 1 299 -11 1104 145 0 0 chr2 100220623 100220782 -150467072 + FRAM SINE Alu 1 158 -18 1718 193 3 3 chr2 100221467 100221767 -150466087 - AluJb SINE Alu -12 300 1 2122 101 16 38 chr2 100222631 100222669 -150465185 - AluSx SINE Alu -3 309 272 210 91 0 0 chr2 100222669 100222702 -150465152 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2122 101 16 38 chr2 100222702 100222979 -150464875 - AluSx SINE Alu -40 272 1 425 91 0 52 chr2 100222985 100223100 -150464754 - Alu SINE Alu 0 350 240 1742 147 8 4 chr2 100223183 100223449 -150464405 - AluSx SINE Alu -17 295 29 245 133 67 33 chr2 100223476 100223566 -150464288 + T-rich Low_complexity Low_complexity 1 93 0 282 193 0 0 chr2 100223658 100223715 -150464139 + (CA)n Simple_repeat Simple_repeat 2 58 0 25 0 0 0 chr2 100223795 100223820 -150464034 + AT_rich Low_complexity Low_complexity 1 25 0 1929 124 7 19 chr2 100224688 100224995 -150462859 - AluSq SINE Alu -10 303 1 923 188 0 30 chr2 100225005 100225202 -150462652 - L1MB8 LINE L1 0 6178 5988 181 335 97 24 chr2 100225474 100225722 -150462132 - L2 LINE L2 -1756 1558 1293 315 274 170 52 chr2 100226170 100226476 -150461378 - L1ME LINE L1 -555 5609 5268 2281 103 0 7 chr2 100226548 100226850 -150461004 - AluY SINE Alu -11 300 1 312 137 0 0 chr2 100226874 100226925 -150460929 + (A)n Simple_repeat Simple_repeat 1 51 0 1175 132 21 5 chr2 100227297 100227487 -150460367 + L1P LINE L1 3607 3799 -2347 3343 141 6 8 chr2 100227489 100228022 -150459832 - L1P LINE L1 -1822 4324 3793 507 196 10 0 chr2 100228033 100228135 -150459719 + L1M4 LINE L1 2476 2578 -3568 707 209 12 18 chr2 100228161 100228340 -150459514 + MER33 DNA MER1_type 1 171 -97 717 122 0 9 chr2 100228341 100228448 -150459406 + AluJb SINE Alu 2 107 -205 368 236 9 9 chr2 100228598 100228704 -150459150 - L1ME3 LINE L1 -50 6112 6007 291 305 74 0 chr2 100230644 100230739 -150457115 - L1MC5 LINE L1 -67 7894 7793 217 239 0 0 chr2 100230746 100230792 -150457062 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 1407 166 45 139 chr2 100231038 100231527 -150456327 - L1MC3 LINE L1 -571 7214 6772 888 190 124 7 chr2 100231531 100231827 -150456027 - L1MC3 LINE L1 -818 5328 5177 626 251 60 6 chr2 100231833 100232016 -150455838 - L1MC3 LINE L1 -1314 4832 4640 193 324 44 0 chr2 100232093 100232161 -150455693 + MIR SINE MIR 33 103 -159 382 299 96 61 chr2 100232592 100232789 -150455065 + L2 LINE L2 2445 2648 -666 1444 164 0 39 chr2 100232876 100233132 -150454722 - AluJb SINE Alu -66 246 1 392 209 132 62 chr2 100233163 100233292 -150454562 + MIR SINE MIR 19 156 -106 285 318 23 31 chr2 100233306 100233435 -150454419 - MER5A DNA MER1_type -27 162 35 22 35 0 0 chr2 100233777 100233806 -150454048 + AT_rich Low_complexity Low_complexity 1 29 0 2318 80 0 26 chr2 100233845 100234157 -150453697 + AluSg SINE Alu 1 304 -6 308 300 9 45 chr2 100234484 100234594 -150453260 + MIR3 SINE MIR 97 202 -6 22 35 0 0 chr2 100235131 100235160 -150452694 + AT_rich Low_complexity Low_complexity 1 29 0 593 231 128 6 chr2 100237083 100237331 -150450523 + L1ME LINE L1 5290 5592 -572 24 32 0 0 chr2 100237333 100237364 -150450490 + AT_rich Low_complexity Low_complexity 1 31 0 2277 88 10 7 chr2 100237366 100237663 -150450191 - AluSq SINE Alu -15 298 1 2105 119 3 0 chr2 100237674 100237959 -150449895 - AluSx SINE Alu -25 287 2 234 162 0 44 chr2 100238564 100238632 -150449222 + GA-rich Low_complexity Low_complexity 2 66 0 181 106 21 64 chr2 100239185 100239232 -150448622 + (GAAAA)n Simple_repeat Simple_repeat 4 48 0 378 279 52 15 chr2 100239565 100239701 -150448153 - L1MC5 LINE L1 -64 7897 7757 618 243 47 0 chr2 100239778 100239926 -150447928 - L1MC4 LINE L1 -1117 6925 6771 371 290 101 12 chr2 100240079 100240248 -150447606 - MIR SINE MIR 0 262 79 1888 212 146 17 chr2 100241570 100242289 -150445565 + L1ME1 LINE L1 4571 5396 -781 2102 108 9 56 chr2 100242333 100242656 -150445198 - AluSq SINE Alu -5 308 1 2213 221 99 18 chr2 100242656 100243245 -150444609 + L1ME1 LINE L1 5517 6156 -10 2198 116 0 3 chr2 100243892 100244193 -150443661 + AluSx SINE Alu 1 300 -12 1832 116 0 40 chr2 100244630 100244905 -150442949 + AluY SINE Alu 35 298 -13 21 0 0 0 chr2 100245969 100245990 -150441864 + AT_rich Low_complexity Low_complexity 1 21 0 2497 53 0 3 chr2 100246108 100246407 -150441447 + AluY SINE Alu 1 298 -13 1032 240 139 59 chr2 100247127 100247245 -150440609 - L1MDa LINE L1 -3129 3411 3304 2346 72 3 3 chr2 100247245 100247537 -150440317 - AluSp SINE Alu -18 295 4 1032 240 139 59 chr2 100247537 100248064 -150439790 - L1MDa LINE L1 -3236 3304 2714 1225 156 55 138 chr2 100248119 100248516 -150439338 - MLT1A1 LTR MaLR 0 365 2 230 233 81 12 chr2 100248517 100248603 -150439251 - L1MDa LINE L1 -3919 2621 2530 23 0 0 0 chr2 100248712 100248735 -150439119 + AT_rich Low_complexity Low_complexity 1 23 0 2100 141 0 0 chr2 100248908 100249212 -150438642 + AluSx SINE Alu 1 304 -8 378 274 117 19 chr2 100249300 100249610 -150438244 - L1MDa LINE L1 -856 2045 1798 480 315 101 23 chr2 100249720 100250275 -150437579 - L1MDa LINE L1 -4970 1560 963 844 133 62 116 chr2 100250696 100250921 -150436933 + MER46A DNA MER2_type 1 213 -23 1518 100 43 43 chr2 100250943 100251173 -150436681 - MER30 DNA MER1_type 0 230 1 25 31 0 0 chr2 100251206 100251238 -150436616 + AT_rich Low_complexity Low_complexity 1 32 0 336 200 0 0 chr2 100251289 100251364 -150436490 + GA-rich Low_complexity Low_complexity 1 75 0 23 0 0 0 chr2 100252140 100252163 -150435691 + AT_rich Low_complexity Low_complexity 1 23 0 652 173 6 99 chr2 100252268 100252430 -150435424 - MER20 DNA MER1_type -1 218 72 402 207 73 0 chr2 100252620 100252702 -150435152 - MLT1A2 LTR MaLR -286 88 1 269 307 113 67 chr2 100253207 100253507 -150434347 + L3 LINE CR1 1257 1570 -7 32 26 0 0 chr2 100253877 100253916 -150433938 + AT_rich Low_complexity Low_complexity 1 39 0 231 287 46 9 chr2 100254372 100254480 -150433374 - L1MC5 LINE L1 -39 7922 7811 1262 201 85 41 chr2 100254917 100255108 -150432746 - L1MC5 LINE L1 -766 7195 7014 974 90 0 83 chr2 100255108 100255253 -150432601 - FLAM_C SINE Alu 0 133 1 1262 201 85 41 chr2 100255253 100255450 -150432404 - L1MC5 LINE L1 -947 7014 6790 282 246 0 0 chr2 100255500 100255565 -150432289 - LTR41 LTR ERVL -700 73 9 337 272 162 39 chr2 100255611 100255920 -150431934 - HAL1b LINE L1 -610 738 392 315 0 0 0 chr2 100256420 100256455 -150431399 + (TG)n Simple_repeat Simple_repeat 1 35 0 2256 136 61 88 chr2 100257906 100258383 -150429471 + Tigger1 DNA MER2_type 1 464 -1954 * 8912 121 16 11 chr2 100258381 100258865 -150428989 + Tigger1 DNA MER2_type 692 1172 -1246 2127 24 49 0 chr2 100258865 100259112 -150428742 + AluY SINE Alu 37 295 -16 8912 121 16 11 chr2 100259112 100259953 -150427901 + Tigger1 DNA MER2_type 1172 2024 -394 2161 105 10 7 chr2 100260065 100260369 -150427485 - AluSq SINE Alu 0 313 9 2236 79 0 79 chr2 100260620 100260950 -150426904 + AluSg SINE Alu 1 304 -6 757 196 80 93 chr2 100261820 100261987 -150425867 + Charlie4a DNA MER1_type 39 202 -1759 2118 111 16 7 chr2 100261987 100262294 -150425560 - AluSg SINE Alu 0 310 1 757 196 80 93 chr2 100262294 100262437 -150425417 + Charlie4a DNA MER1_type 202 345 -163 2388 78 3 3 chr2 100263995 100264291 -150423563 + AluSc SINE Alu 1 296 -13 251 225 54 45 chr2 100264844 100264955 -150422899 + AluY SINE Alu 187 298 -3 2047 126 7 3 chr2 100265109 100265402 -150422452 - AluJb SINE Alu -13 299 6 2396 90 3 0 chr2 100266327 100266628 -150421226 - AluSc SINE Alu -7 302 1 262 254 0 17 chr2 100266638 100266697 -150421157 - MIR SINE MIR -65 143 86 965 263 157 30 chr2 100266708 100267134 -150420720 - MER45C DNA AcHobo -1 952 473 730 268 132 11 chr2 100267119 100267399 -150420455 - MER45C DNA AcHobo -582 371 58 * 2297 82 3 20 chr2 100267640 100267945 -150419909 + AluSp SINE Alu 1 300 -13 2068 142 3 3 chr2 100268107 100268416 -150419438 - AluSx SINE Alu -3 309 1 862 220 42 5 chr2 100268703 100268894 -150418960 + MIR SINE MIR 31 228 -34 2103 113 0 7 chr2 100269580 100269862 -150417992 + AluSx SINE Alu 1 280 -32 392 257 71 0 chr2 100269873 100269986 -150417868 + MIR SINE MIR 137 257 -5 25 0 0 0 chr2 100271506 100271531 -150416323 + AT_rich Low_complexity Low_complexity 1 25 0 56 29 0 0 chr2 100272448 100272518 -150415336 + AT_rich Low_complexity Low_complexity 1 70 0 186 372 16 8 chr2 100273777 100273898 -150413956 + L2 LINE L2 2697 2818 -496 383 243 189 0 chr2 100273937 100274048 -150413806 - MIR SINE MIR -53 209 78 229 265 133 33 chr2 100274491 100274642 -150413212 - MIR SINE MIR -64 198 33 2312 102 3 0 chr2 100276163 100276467 -150411387 - AluSg SINE Alu -5 305 1 410 214 107 0 chr2 100276791 100276903 -150410951 + L2 LINE L2 3186 3309 -4 207 139 0 0 chr2 100276905 100276941 -150410913 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 209 143 0 41 chr2 100277044 100277093 -150410761 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 424 127 16 0 chr2 100277203 100277266 -150410588 - LTR68 LTR ERV1 0 740 677 294 29 0 0 chr2 100278448 100278483 -150409371 + (CTG)n Simple_repeat Simple_repeat 3 37 0 2225 96 0 0 chr2 100281077 100281382 -150406472 - AluSx SINE Alu 0 305 1 847 226 6 6 chr2 100281821 100281985 -150405869 - AluJo SINE Alu -28 284 121 595 301 107 56 chr2 100282723 100283156 -150404698 - L2 LINE L2 -8 3264 2780 2045 127 41 75 chr2 100283156 100283543 -150404311 - THE1C LTR MaLR -1 374 1 595 301 107 56 chr2 100283543 100283682 -150404172 - L2 LINE L2 -492 2780 2650 1065 256 166 8 chr2 100283693 100284170 -150403684 - L2 LINE L2 -2141 1173 622 655 169 0 57 chr2 100284239 100284363 -150403491 - MER119 DNA MER1_type 0 583 467 590 283 47 51 chr2 100284400 100284487 -150403367 - L1MC4 LINE L1 -616 7251 7165 2487 156 40 28 chr2 100284487 100284555 -150403299 - MSTB1 LTR MaLR 0 432 366 2412 93 0 0 chr2 100284555 100284856 -150402998 + AluSq SINE Alu 1 301 -12 2487 156 40 28 chr2 100284856 100285211 -150402643 - MSTB1 LTR MaLR -66 366 4 590 283 47 51 chr2 100285211 100285278 -150402576 - L1MC4 LINE L1 -702 7165 7041 1505 104 9 5 chr2 100286305 100286516 -150401338 - AluSx SINE Alu -2 310 99 1890 164 78 29 chr2 100286516 100286965 -150400889 + LTR10A LTR ERV1 1 548 -61 10641 204 47 19 chr2 100286979 100289517 -150398337 + LTR10A-int LTR ERV1 6 2587 -5198 18175 98 32 42 chr2 100289566 100291965 -150395889 + Harlequin LTR ERV1 713 3134 -3515 2321 82 13 10 chr2 100291965 100292270 -150395584 + AluY SINE Alu 1 306 -5 18175 98 32 42 chr2 100292270 100293812 -150394042 + Harlequin LTR ERV1 3134 6632 -17 1806 174 74 29 chr2 100293841 100294293 -150393561 + LTR10A LTR ERV1 13 548 -61 782 109 0 0 chr2 100294302 100294403 -150393451 - AluSx SINE Alu -209 103 3 506 310 53 6 chr2 100294553 100294724 -150393130 - MIR3 SINE MIR -11 197 19 236 252 183 26 chr2 100294886 100295001 -150392853 + MIR3 SINE MIR 5 137 -71 381 212 77 59 chr2 100295380 100295550 -150392304 + HAL1 LINE L1 1 173 -2334 1225 141 11 0 chr2 100295642 100295826 -150392028 + MER57A LTR ERV1 1 186 -217 235 230 103 35 chr2 100295965 100296052 -150391802 + L2 LINE L2 3139 3231 -41 2238 230 17 58 chr2 100296285 100296438 -150391416 - MER90 LTR ERV1 0 575 417 2205 126 0 13 chr2 100296438 100296748 -150391106 + AluSx SINE Alu 4 309 -3 2238 230 17 58 chr2 100296748 100296875 -150390979 - MER90 LTR ERV1 -158 417 286 2193 103 0 0 chr2 100296875 100297182 -150390672 - AluSc SINE Alu 0 307 1 2238 230 17 58 chr2 100297182 100297498 -150390356 - MER90 LTR ERV1 -289 286 2 1082 278 61 62 chr2 100297654 100298129 -150389725 - MER90-int LTR ERV1 -121 6680 6205 1709 159 6 49 chr2 100298129 100298343 -150389511 - AluJo SINE Alu 0 312 115 2217 123 0 3 chr2 100298343 100298645 -150389209 - AluSx SINE Alu -11 301 1 1709 159 6 49 chr2 100298645 100298756 -150389098 - AluJo SINE Alu -197 115 1 1082 278 61 62 chr2 100298756 100298891 -150388963 - MER90-int LTR ERV1 -596 6205 6071 1204 91 0 0 chr2 100299510 100299664 -150388190 + AluSg SINE Alu 1 154 -156 634 269 39 53 chr2 100299791 100299969 -150387885 - MER90-int LTR ERV1 -1463 5338 5159 2119 117 0 3 chr2 100299969 100300260 -150387594 - AluSc SINE Alu -19 290 1 634 269 39 53 chr2 100300260 100300483 -150387371 - MER90-int LTR ERV1 -1642 5159 2647 1197 216 68 27 chr2 100300516 100300783 -150387071 - MLT1C LTR MaLR 0 467 186 2094 136 0 3 chr2 100300783 100301093 -150386761 - AluSx SINE Alu -3 309 1 1197 216 68 27 chr2 100301093 100301117 -150386737 - MLT1C LTR MaLR -281 186 164 464 143 0 14 chr2 100301130 100301200 -150386654 + AluJ/FLAM SINE Alu 14 82 -230 2528 153 32 40 chr2 100301300 100301386 -150386468 + Tigger1 DNA MER2_type 1927 2012 -406 2249 81 10 3 chr2 100301386 100301682 -150386172 - AluSp SINE Alu -15 298 1 2528 153 32 40 chr2 100301682 100302091 -150385763 + Tigger1 DNA MER2_type 2012 2418 0 995 216 85 49 chr2 100302098 100302464 -150385390 - L1ME2 LINE L1 -34 6130 5752 * 3910 195 67 143 chr2 100302461 100302803 -150385051 - L1ME2 LINE L1 -648 5530 5164 330 26 0 0 chr2 100302803 100302842 -150385012 + (TG)n Simple_repeat Simple_repeat 2 40 0 3910 195 67 143 chr2 100302842 100302873 -150384981 - L1ME2 LINE L1 -1014 5164 5132 1328 165 19 68 chr2 100302873 100303182 -150384672 - AluSx SINE Alu -18 294 1 3910 195 67 143 chr2 100303182 100303244 -150384610 - L1ME2 LINE L1 -1046 5132 5067 1944 153 10 0 chr2 100303244 100303545 -150384309 - AluSx SINE Alu -8 304 1 3910 195 67 143 chr2 100303545 100304170 -150383684 - L1ME2 LINE L1 -1111 5067 4396 774 173 29 22 chr2 100304170 100304309 -150383545 - FLAM_C SINE Alu -2 141 2 3910 195 67 143 chr2 100304309 100305228 -150382626 - L1ME2 LINE L1 -1782 4396 3568 26 50 0 0 chr2 100305662 100305702 -150382152 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr2 100306765 100306786 -150381068 + AT_rich Low_complexity Low_complexity 1 21 0 2699 154 26 14 chr2 100307298 100307727 -150380127 - Tigger2a DNA MER2_type 0 434 1 1725 167 37 10 chr2 100308067 100308361 -150379493 - AluJb SINE Alu -10 302 1 328 194 42 14 chr2 100308413 100308485 -150379369 - L1ME LINE L1 -369 5801 5728 221 0 0 33 chr2 100308485 100308515 -150379339 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 868 85 0 0 chr2 100308542 100308648 -150379206 - AluSg/x SINE Alu -142 170 65 436 264 186 12 chr2 100308754 100309252 -150378602 - L1ME LINE L1 -554 5608 5039 1049 135 13 6 chr2 100309696 100309852 -150378002 + AluSg/x SINE Alu 137 293 -19 1848 161 0 3 chr2 100311686 100311972 -150375882 - AluJb SINE Alu -27 285 1 432 320 163 12 chr2 100312145 100312476 -150375378 - L2 LINE L2 -419 2895 2515 412 257 173 15 chr2 100313843 100314447 -150373407 - L1MC4a LINE L1 -341 7467 6842 275 240 41 83 chr2 100314547 100314668 -150373186 + L2 LINE L2 2621 2736 -578 189 301 55 0 chr2 100314703 100314776 -150373078 + L2 LINE L2 2880 2956 -358 2231 98 0 7 chr2 100317800 100318097 -150369757 + AluSx SINE Alu 1 295 -17 1103 146 228 43 chr2 100318113 100318367 -150369487 - AluJb SINE Alu -1 301 1 183 129 0 0 chr2 100319375 100319406 -150368448 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 182 222 67 0 chr2 100319623 100319668 -150368186 + MIR SINE MIR 59 106 -156 234 0 0 0 chr2 100320643 100320669 -150367185 + (TCCCC)n Simple_repeat Simple_repeat 1 26 0 1483 107 5 5 chr2 100323415 100323620 -150364234 - AluSg/x SINE Alu 0 312 108 2017 102 7 4 chr2 100323626 100323900 -150363954 + AluSq SINE Alu 21 295 -18 606 191 127 0 chr2 100325344 100325454 -150362400 + FLAM_C SINE Alu 1 124 -19 1885 163 3 0 chr2 100325899 100326188 -150361666 + AluSx SINE Alu 1 290 -22 2116 132 0 0 chr2 100326359 100326648 -150361206 - AluSx SINE Alu -23 289 1 2300 88 0 3 chr2 100327342 100327637 -150360217 + AluSx SINE Alu 1 294 -18 201 138 0 0 chr2 100327734 100327763 -150360091 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2221 87 0 75 chr2 100328053 100328385 -150359469 + AluSq SINE Alu 1 307 -6 1342 192 74 7 chr2 100329993 100330264 -150357590 + AluJo SINE Alu 1 289 -23 22 0 0 0 chr2 100330554 100330576 -150357278 + AT_rich Low_complexity Low_complexity 1 22 0 736 218 40 10 chr2 100331616 100331818 -150356036 + MER3 DNA MER1_type 2 209 0 2243 81 44 0 chr2 100332749 100333044 -150354810 + AluY SINE Alu 3 310 -1 2116 146 20 38 chr2 100333163 100333239 -150354615 + MLT1B LTR MaLR 1 77 -313 2034 127 7 13 chr2 100333239 100333546 -150354308 - AluSx SINE Alu -7 305 1 2116 146 20 38 chr2 100333546 100333866 -150353988 + MLT1B LTR MaLR 77 390 0 2200 93 10 7 chr2 100335308 100335608 -150352246 - AluY SINE Alu -6 305 5 1453 202 160 38 chr2 100336311 100336762 -150351092 + MER74B LTR ERVL 58 563 -59 204 308 168 40 chr2 100336831 100337152 -150350702 - L2 LINE L2 -2788 526 165 229 299 93 56 chr2 100339252 100339359 -150348495 + L2 LINE L2 3137 3247 -25 270 180 44 80 chr2 100339462 100339588 -150348266 + MER58 DNA MER1_type 169 279 -62 30 59 0 0 chr2 100339683 100339734 -150348120 + AT_rich Low_complexity Low_complexity 1 51 0 186 307 164 42 chr2 100339948 100340137 -150347717 + L3 LINE CR1 1297 1508 -69 21 57 0 0 chr2 100341411 100341446 -150346408 + AT_rich Low_complexity Low_complexity 1 35 0 199 313 62 0 chr2 100341527 100341591 -150346263 - L2 LINE L2 -37 3235 3168 2257 96 3 0 chr2 100341857 100342150 -150345704 + AluSp SINE Alu 1 294 -19 2325 87 3 7 chr2 100342168 100342466 -150345388 + AluSq SINE Alu 3 299 -14 2095 86 4 4 chr2 100343004 100343284 -150344570 + AluSg SINE Alu 1 280 -30 23 78 0 0 chr2 100344668 100344719 -150343135 + AT_rich Low_complexity Low_complexity 1 51 0 2321 70 20 10 chr2 100344816 100345115 -150342739 + AluY SINE Alu 1 302 -9 21 0 0 0 chr2 100345878 100345899 -150341955 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 100346052 100346075 -150341779 + AT_rich Low_complexity Low_complexity 1 23 0 184 152 30 0 chr2 100347184 100347217 -150340637 - L2 LINE L2 -81 3232 3199 559 257 180 15 chr2 100352408 100352614 -150335240 - MIR SINE MIR -15 247 8 1909 129 33 13 chr2 100353083 100353385 -150334469 - AluJo SINE Alu -4 308 1 433 279 25 83 chr2 100353387 100353591 -150334263 - MIR SINE MIR -70 192 1 209 231 137 9 chr2 100353986 100354081 -150333773 + MIR3 SINE MIR 65 179 -29 25 51 0 0 chr2 100354509 100354548 -150333306 + AT_rich Low_complexity Low_complexity 1 39 0 278 233 0 41 chr2 100355812 100355885 -150331969 + L2 LINE L2 3240 3309 -4 2346 95 7 0 chr2 100358074 100358379 -150329475 + AluSq SINE Alu 1 307 -6 2261 32 86 7 chr2 100359942 100360222 -150327632 - AluY SINE Alu -9 302 1 278 280 196 0 chr2 100362286 100362393 -150325461 + MIR SINE MIR 19 146 -62 2254 109 7 0 chr2 100362593 100362895 -150324959 - AluSg SINE Alu -6 304 1 2297 59 3 52 chr2 100363265 100363572 -150324282 - AluSc SINE Alu -17 292 1 299 273 59 113 chr2 100363678 100363819 -150324035 - MIR SINE MIR -13 249 127 1836 108 90 4 chr2 100363819 100364098 -150323756 - AluSg SINE Alu -7 303 1 299 273 59 113 chr2 100364098 100364212 -150323642 - MIR SINE MIR -135 127 8 450 258 48 32 chr2 100364760 100364884 -150322970 + L2 LINE L2 3182 3307 -6 1732 140 86 0 chr2 100365109 100365388 -150322466 + AluJb SINE Alu 1 303 -9 35 0 0 0 chr2 100365398 100365433 -150322421 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr2 100365611 100365635 -150322219 + AT_rich Low_complexity Low_complexity 1 24 0 27 81 0 0 chr2 100366116 100366178 -150321676 + AT_rich Low_complexity Low_complexity 1 62 0 1251 147 126 3 chr2 100366727 100367012 -150320842 - MER33 DNA MER1_type -1 323 4 347 344 8 25 chr2 100367617 100367739 -150320115 + MIR SINE MIR 20 139 -123 22 0 0 0 chr2 100368054 100368076 -150319778 + AT_rich Low_complexity Low_complexity 1 22 0 1774 184 13 7 chr2 100368245 100368555 -150319299 + AluJb SINE Alu 1 312 0 477 249 160 24 chr2 100368651 100368820 -150319034 + L2 LINE L2 3114 3305 -8 875 270 27 9 chr2 100368950 100369172 -150318682 + MIR SINE MIR 11 236 -26 2331 88 7 0 chr2 100369181 100369475 -150318379 + AluSc SINE Alu 1 296 -13 2338 109 0 0 chr2 100369715 100370019 -150317835 + AluSg SINE Alu 1 304 -6 579 149 0 0 chr2 100370131 100370225 -150317629 - AluJo/FRAM SINE Alu -13 299 206 * 626 193 7 37 chr2 100370222 100370357 -150317497 + FLAM_C SINE Alu 13 143 0 2229 115 3 3 chr2 100370370 100370683 -150317171 + AluSp SINE Alu 1 313 0 628 223 20 7 chr2 100370687 100370835 -150317019 + AluJo SINE Alu 120 269 -43 22 35 0 0 chr2 100370835 100370864 -150316990 + AT_rich Low_complexity Low_complexity 1 29 0 237 33 0 0 chr2 100371732 100371762 -150316092 + (A)n Simple_repeat Simple_repeat 1 30 0 464 302 14 5 chr2 100371862 100372074 -150315780 + AluSq SINE Alu 100 313 0 994 162 58 0 chr2 100372079 100372252 -150315602 + AluJo SINE Alu 120 302 -10 994 234 158 23 chr2 100373714 100374056 -150313798 - L2 LINE L2 0 3313 2926 189 329 84 49 chr2 100374466 100374609 -150313245 + L2 LINE L2 2958 3105 -167 1081 234 41 27 chr2 100374731 100374893 -150312961 + L1MD1 LINE L1 4482 4640 -1506 2041 142 0 10 chr2 100374893 100375195 -150312659 + AluSx SINE Alu 1 299 -13 1081 234 41 27 chr2 100375195 100375399 -150312455 + L1MD1 LINE L1 4640 4853 -1293 3701 190 105 19 chr2 100375403 100376420 -150311434 + L1MD1 LINE L1 4914 6068 -174 2561 54 0 0 chr2 100376420 100376718 -150311136 + AluY SINE Alu 1 298 -13 3701 190 105 19 chr2 100376718 100376910 -150310944 + L1MD1 LINE L1 6068 6242 0 1728 208 0 0 chr2 100376917 100377229 -150310625 + AluJb SINE Alu 1 312 0 689 81 10 0 chr2 100377487 100377586 -150310268 + MER101 LTR ERV1 367 466 -8 2316 56 0 0 chr2 100377598 100377868 -150309986 - AluSc SINE Alu -39 270 1 304 213 33 0 chr2 100377886 100377947 -150309907 - L2 LINE L2 -69 3244 3182 289 114 0 0 chr2 100377972 100378016 -150309838 + L1MC3 LINE L1 7408 7451 -334 330 335 120 33 chr2 100378778 100379053 -150308801 - L2 LINE L2 -8 3264 2966 310 345 31 36 chr2 100379133 100379327 -150308527 + HAL1 LINE L1 133 325 -2182 485 253 78 107 chr2 100379419 100379727 -150308127 + HAL1 LINE L1 482 780 -1727 27 29 0 0 chr2 100380175 100380209 -150307645 + AT_rich Low_complexity Low_complexity 1 34 0 2348 86 0 0 chr2 100380299 100380590 -150307264 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr2 100380590 100380612 -150307242 + AT_rich Low_complexity Low_complexity 1 22 0 2096 125 3 3 chr2 100380731 100381018 -150306836 + AluSq SINE Alu 1 287 -26 2175 118 10 0 chr2 100381120 100381417 -150306437 - AluSq SINE Alu -13 300 1 27 0 0 0 chr2 100381629 100381656 -150306198 + AT_rich Low_complexity Low_complexity 1 27 0 580 296 31 13 chr2 100382058 100382284 -150305570 - L1ME LINE L1 -306 5815 5586 2439 62 0 31 chr2 100383424 100383744 -150304110 - AluY SINE Alu -1 310 1 2281 97 3 0 chr2 100383746 100384035 -150303819 - AluSx SINE Alu -22 290 1 1112 103 0 26 chr2 100385257 100385393 -150302461 + AluSq/x SINE Alu 1 134 -178 2522 74 3 0 chr2 100385393 100385702 -150302152 + AluSp SINE Alu 2 311 -2 1112 103 0 26 chr2 100385702 100385720 -150302134 + AluSq/x SINE Alu 134 151 -161 230 330 33 11 chr2 100386466 100386566 -150301288 + MIR SINE MIR 45 146 -62 2252 64 0 0 chr2 100387361 100387628 -150300226 + AluY SINE Alu 29 295 -16 4954 39 3 8 chr2 100387855 100388447 -150299407 + LTR10C LTR ERV1 1 589 -2 4521 173 81 17 chr2 100388814 100390038 -150297816 + L1MB3 LINE L1 4872 6183 0 2234 106 16 16 chr2 100390577 100390888 -150296966 + AluSx SINE Alu 1 311 -1 426 179 93 50 chr2 100391460 100391600 -150296254 - L1ME4a LINE L1 0 6121 5976 2133 138 0 0 chr2 100392113 100392417 -150295437 + AluSx SINE Alu 1 304 -8 3384 55 17 3 chr2 100392525 100393042 -150294812 - LTR10C LTR ERV1 0 591 1 677 140 0 0 chr2 100393094 100393194 -150294660 + AluSg/x SINE Alu 194 293 -16 2204 126 0 3 chr2 100393196 100393505 -150294349 + AluSg1 SINE Alu 1 308 -1 1994 208 65 37 chr2 100393733 100393773 -150294081 + MER77 LTR ERV1 84 121 -484 2202 95 0 0 chr2 100393773 100394047 -150293807 + AluSg SINE Alu 5 278 -32 243 0 0 0 chr2 100394047 100394074 -150293780 + (TAA)n Simple_repeat Simple_repeat 2 28 0 1994 208 65 37 chr2 100394074 100394558 -150293296 + MER77 LTR ERV1 120 601 -4 713 276 124 49 chr2 100394603 100395053 -150292801 + MLT1J LTR MaLR 20 503 -8 1897 131 34 17 chr2 100395444 100395741 -150292113 + AluSx SINE Alu 1 302 -10 242 272 33 33 chr2 100395825 100395917 -150291937 + L2 LINE L2 2261 2352 -962 719 177 171 18 chr2 100396192 100396356 -150291498 - MER5A DNA MER1_type 0 189 1 2185 119 3 0 chr2 100396541 100396844 -150291010 + AluSg SINE Alu 1 304 -6 1131 153 140 35 chr2 100397033 100397262 -150290592 + AluJo SINE Alu 23 275 -37 228 35 0 0 chr2 100397269 100397298 -150290556 + (TAA)n Simple_repeat Simple_repeat 1 29 0 1380 239 3 13 chr2 100397531 100397832 -150290022 + AluJb SINE Alu 1 298 -14 25 31 0 0 chr2 100398328 100398360 -150289494 + AT_rich Low_complexity Low_complexity 1 32 0 1425 164 68 38 chr2 100399077 100399370 -150288484 + AluJo SINE Alu 3 304 -8 988 249 106 106 chr2 100399375 100400065 -150287789 + MER21B LTR ERV1 40 708 -155 417 121 0 0 chr2 100400176 100400234 -150287620 + U6 snRNA snRNA 1 58 -49 2056 94 0 4 chr2 100400261 100400528 -150287326 + AluSq SINE Alu 35 300 -13 1938 139 3 0 chr2 100401583 100401886 -150285968 + L1PA14 LINE L1 5858 6161 0 219 266 114 0 chr2 100402414 100402493 -150285361 + MIR SINE MIR 149 236 -26 1737 165 0 41 chr2 100403327 100403642 -150284212 + AluJb SINE Alu 1 302 -10 2464 64 0 0 chr2 100403741 100404036 -150283818 + AluY SINE Alu 1 295 -16 730 231 33 24 chr2 100404041 100404253 -150283601 - MIR SINE MIR -43 219 6 * 776 309 85 50 chr2 100404251 100404964 -150282890 - L2 LINE L2 0 3313 2577 362 280 91 21 chr2 100405391 100405577 -150282277 - MIR SINE MIR -13 249 51 22 0 0 0 chr2 100407140 100407162 -150280692 + GC_rich Low_complexity Low_complexity 1 22 0 1905 150 0 7 chr2 100407464 100407758 -150280096 + AluJb SINE Alu 21 312 0 618 199 68 7 chr2 100407763 100407909 -150279945 - MLT1C LTR MaLR -300 167 13 2088 300 44 26 chr2 100407916 100408733 -150279121 - MER89-int LTR ERV1 -2065 2582 1751 809 304 72 88 chr2 100408905 100408954 -150278900 - MER89-int LTR ERV1 -3182 3877 3829 2409 86 0 3 chr2 100408954 100409256 -150278598 + AluSx SINE Alu 1 301 -11 809 304 72 88 chr2 100409256 100410613 -150277241 - MER89-int LTR ERV1 -3230 3829 2549 418 311 48 82 chr2 100410795 100410890 -150276964 - MER89-int LTR ERV1 -4435 2366 2269 2467 71 0 3 chr2 100410890 100411187 -150276667 + AluY SINE Alu 1 296 -15 418 311 48 82 chr2 100411187 100411589 -150276265 - MER89-int LTR ERV1 -4532 2269 1896 1243 189 147 23 chr2 100411589 100411895 -150275959 - MER2 DNA MER2_type 0 344 1 418 311 48 82 chr2 100411895 100412077 -150275777 - MER89-int LTR ERV1 -4905 1896 1709 31 26 0 0 chr2 100412264 100412302 -150275552 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 100412415 100412437 -150275417 + AT_rich Low_complexity Low_complexity 1 22 0 4092 189 40 8 chr2 100412443 100413236 -150274618 - L1MD2 LINE L1 -39 6320 5502 2236 91 7 0 chr2 100413241 100413528 -150274326 - AluSx SINE Alu -13 299 11 307 188 25 25 chr2 100413529 100413609 -150274245 + MLT1J LTR MaLR 429 508 -3 2177 118 3 0 chr2 100414385 100414690 -150273164 - AluSq SINE Alu -4 309 4 718 214 25 13 chr2 100414932 100415091 -150272763 + MER20 DNA MER1_type 1 161 -58 624 139 0 78 chr2 100415108 100415205 -150272649 - MER45B DNA AcHobo -541 1040 952 2439 78 0 0 chr2 100415205 100415500 -150272354 + AluSx SINE Alu 1 295 -17 624 139 0 78 chr2 100415500 100415517 -150272337 - MER45B DNA AcHobo -629 952 935 1347 157 141 16 chr2 100415520 100415769 -150272085 + AluJo SINE Alu 8 287 -25 2186 157 37 23 chr2 100415776 100416204 -150271650 - MER45B DNA AcHobo -85 955 522 865 173 6 6 chr2 100416205 100416384 -150271470 - MER53 DNA DNA 0 189 11 2385 211 40 30 chr2 100416388 100416784 -150271070 - MER45B DNA AcHobo -503 537 133 2080 138 3 0 chr2 100416784 100417081 -150270773 - AluSx SINE Alu -14 298 1 2385 211 40 30 chr2 100417081 100417216 -150270638 - MER45B DNA AcHobo -907 133 1 312 114 0 0 chr2 100417216 100417260 -150270594 + MER20 DNA MER1_type 176 219 0 2226 117 0 13 chr2 100417441 100417750 -150270104 - AluSx SINE Alu -7 305 1 337 211 64 55 chr2 100418170 100418299 -150269555 + MLT1L LTR MaLR 85 209 -379 3765 97 36 46 chr2 100418519 100419002 -150268852 - LTR19B LTR ERV1 0 580 94 2282 90 7 10 chr2 100419002 100419302 -150268552 + AluSc SINE Alu 1 299 -10 2320 71 47 3 chr2 100419302 100419599 -150268255 + AluY SINE Alu 1 310 -1 3765 97 36 46 chr2 100419599 100419700 -150268154 - LTR19B LTR ERV1 -484 96 1 2318 183 69 83 chr2 100420317 100420952 -150266902 + MLT1E2 LTR MaLR 1 626 0 2292 113 0 0 chr2 100421106 100421408 -150266446 - AluSg SINE Alu -8 302 1 2222 110 0 3 chr2 100421532 100421824 -150266030 + AluSg SINE Alu 1 291 -19 1862 144 94 60 chr2 100421905 100422131 -150265723 - MSTD LTR MaLR 0 396 150 2246 111 0 3 chr2 100422131 100422429 -150265425 - AluSx SINE Alu -15 297 1 1862 144 94 60 chr2 100422429 100422583 -150265271 - MSTD LTR MaLR -246 150 3 2241 124 0 0 chr2 100422726 100423024 -150264830 - AluSx SINE Alu -14 298 1 1992 139 30 21 chr2 100423269 100423608 -150264246 + L1MC1 LINE L1 5983 6324 -9 180 0 0 0 chr2 100423897 100423917 -150263937 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 2405 104 0 0 chr2 100424159 100424468 -150263386 - AluSg SINE Alu -1 309 1 243 222 10 20 chr2 100424800 100424899 -150262955 + CT-rich Low_complexity Low_complexity 3 100 0 367 276 24 16 chr2 100425331 100425458 -150262396 - MIR3 SINE MIR -12 196 69 192 77 0 0 chr2 100425629 100425655 -150262199 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 2341 77 3 0 chr2 100426481 100426780 -150261074 - AluSq SINE Alu -13 300 1 2451 74 0 6 chr2 100427052 100427363 -150260491 + AluY SINE Alu 1 309 -2 1916 108 0 0 chr2 100427393 100427651 -150260203 + AluSx SINE Alu 51 308 -4 1810 111 4 0 chr2 100428131 100428365 -150259489 + AluSx SINE Alu 1 235 -77 219 69 0 0 chr2 100428365 100428394 -150259460 + (A)n Simple_repeat Simple_repeat 1 29 0 1860 141 0 24 chr2 100428507 100428821 -150259033 - AluSx SINE Alu 0 307 1 429 20 0 0 chr2 100428863 100428913 -150258941 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1523 162 78 27 chr2 100429057 100429353 -150258501 + AluJo SINE Alu 1 311 -1 448 252 156 83 chr2 100429624 100430335 -150257519 + HAL1 LINE L1 831 1593 -914 700 100 0 0 chr2 100430340 100430430 -150257424 + AluS SINE Alu 2 91 -221 2396 107 0 3 chr2 100430430 100430740 -150257114 + AluSx SINE Alu 1 309 -3 2053 116 3 27 chr2 100430740 100431040 -150256814 + AluSp SINE Alu 1 294 -19 3182 162 56 2 chr2 100431041 100431598 -150256256 - L1MB7 LINE L1 -61 6123 5537 1572 162 75 38 chr2 100432305 100432676 -150255178 - MLT1B LTR MaLR -2 388 4 4963 184 16 13 chr2 100433463 100434845 -150253009 + L1MB7 LINE L1 4679 6066 -118 2336 105 0 3 chr2 100434845 100435150 -150252704 + AluSq SINE Alu 1 304 -9 4963 184 16 13 chr2 100435150 100435270 -150252584 + L1MB7 LINE L1 6066 6184 0 463 292 19 6 chr2 100435280 100435441 -150252413 + L1MC4a LINE L1 5735 5897 -1911 207 69 0 0 chr2 100435480 100435509 -150252345 + (CA)n Simple_repeat Simple_repeat 2 30 0 531 148 11 0 chr2 100435549 100435637 -150252217 + AluJ/FLAM SINE Alu 5 93 -219 1826 142 0 52 chr2 100436042 100436216 -150251638 - AluJo SINE Alu -18 294 141 2419 87 3 3 chr2 100436216 100436525 -150251329 - AluSc SINE Alu 0 309 1 1826 142 0 52 chr2 100436525 100436660 -150251194 - AluJo SINE Alu -171 141 1 186 43 0 0 chr2 100437261 100437284 -150250570 + (GA)n Simple_repeat Simple_repeat 1 23 0 954 74 16 0 chr2 100437615 100437737 -150250117 - AluSg/x SINE Alu -9 300 177 250 194 188 55 chr2 100437748 100437913 -150249941 - L1ME4a LINE L1 -5 6116 5930 2290 90 14 0 chr2 100438844 100439133 -150248721 + AluSx SINE Alu 1 293 -19 30 0 0 0 chr2 100439284 100439314 -150248540 + AT_rich Low_complexity Low_complexity 1 30 0 2316 114 0 3 chr2 100440043 100440350 -150247504 - AluSq SINE Alu -7 306 1 189 0 0 0 chr2 100441092 100441113 -150246741 + (TG)n Simple_repeat Simple_repeat 1 21 0 183 42 0 0 chr2 100441661 100441685 -150246169 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 232 321 0 0 chr2 100443056 100443112 -150244742 + (TG)n Simple_repeat Simple_repeat 2 57 0 456 271 29 0 chr2 100444410 100444550 -150243304 + L1ME4a LINE L1 5974 6117 -4 1882 108 47 21 chr2 100444588 100444867 -150242987 + AluJo SINE Alu 1 286 -26 2248 100 3 0 chr2 100445423 100445713 -150242141 + AluSx SINE Alu 1 291 -21 335 98 16 0 chr2 100447243 100447304 -150240550 + (TG)n Simple_repeat Simple_repeat 2 63 0 197 246 0 49 chr2 100448203 100448224 -150239630 - L2 LINE L2 -9 3304 3284 1990 134 0 13 chr2 100448224 100448523 -150239331 + AluSx SINE Alu 1 295 -17 197 246 0 49 chr2 100448523 100448562 -150239292 - L2 LINE L2 -29 3284 3247 1950 113 0 14 chr2 100449047 100449322 -150238532 - AluSx SINE Alu -6 306 36 299 276 6 100 chr2 100449582 100449752 -150238102 + L1ME4a LINE L1 5519 5672 -449 2427 83 0 16 chr2 100449752 100450066 -150237788 + AluSc SINE Alu 1 309 0 746 225 34 76 chr2 100450078 100450340 -150237514 + L1ME4a LINE L1 5653 5903 -218 436 70 0 0 chr2 100450344 100450401 -150237453 + AluSp/q SINE Alu 163 219 -94 2146 115 10 3 chr2 100452290 100452585 -150235269 + AluSx SINE Alu 9 305 -7 1481 208 31 0 chr2 100452761 100453049 -150234805 + AluJo SINE Alu 1 297 -15 1361 148 36 4 chr2 100453069 100453319 -150234535 + L1MA7 LINE L1 6029 6286 -5 1287 100 0 0 chr2 100453394 100453564 -150234290 - AluSg/x SINE Alu -6 304 135 262 145 14 43 chr2 100454338 100454407 -150233447 + L3b LINE CR1 1325 1391 -192 2290 92 3 19 chr2 100454459 100454774 -150233080 + AluSq SINE Alu 1 310 -3 928 191 6 0 chr2 100455937 100456099 -150231755 - MER45B DNA AcHobo -380 660 498 1351 115 0 6 chr2 100456100 100456282 -150231572 + AluSx SINE Alu 2 182 -130 576 291 27 18 chr2 100457222 100457442 -150230412 + MIR SINE MIR 40 261 -1 520 243 85 11 chr2 100457468 100457645 -150230209 - L1MDb LINE L1 -4145 2261 2072 734 206 0 0 chr2 100457660 100457796 -150230058 - FLAM_C SINE Alu -5 138 3 3815 199 71 38 chr2 100457801 100459272 -150228582 - L1MDb LINE L1 -4375 2031 522 2549 69 0 0 chr2 100459305 100459608 -150228246 - AluY SINE Alu -6 305 3 2002 115 11 0 chr2 100459745 100460023 -150227831 + AluSp SINE Alu 33 313 0 399 241 0 75 chr2 100460304 100460437 -150227417 - L2 LINE L2 0 3313 3191 25 0 0 0 chr2 100462295 100462320 -150225534 + AT_rich Low_complexity Low_complexity 1 25 0 588 139 0 52 chr2 100462330 100462445 -150225409 - AluSg/x SINE Alu -83 227 119 810 236 0 0 chr2 100462581 100462746 -150225108 + FRAM SINE Alu 1 162 -14 2304 106 0 38 chr2 100463142 100463462 -150224392 - AluSx SINE Alu -4 308 1 196 213 53 75 chr2 100463840 100463934 -150223920 - L2 LINE L2 -357 2956 2865 1718 155 4 4 chr2 100466520 100466797 -150221057 - AluJb SINE Alu -12 300 24 195 146 0 0 chr2 100469441 100469482 -150218372 + (TC)n Simple_repeat Simple_repeat 2 42 0 273 154 0 0 chr2 100470604 100470643 -150217211 - AluSg/x SINE Alu -135 167 129 2062 102 40 43 chr2 100471440 100471743 -150216111 - AluSq SINE Alu -11 302 1 1827 145 3 50 chr2 100472112 100472222 -150215632 + AluJo SINE Alu 2 116 -196 2108 131 7 0 chr2 100472222 100472513 -150215341 - AluSg1 SINE Alu -16 293 1 1827 145 3 50 chr2 100472513 100472719 -150215135 + AluJo SINE Alu 116 303 -9 182 289 103 32 chr2 100474797 100474953 -150212901 - MIR SINE MIR -36 226 60 710 199 6 50 chr2 100475007 100475188 -150212666 - MER5A DNA MER1_type -15 174 2 2323 107 3 0 chr2 100475306 100475615 -150212239 + AluSp SINE Alu 1 310 -3 2203 109 11 0 chr2 100475620 100475903 -150211951 + AluSq SINE Alu 1 286 -27 222 171 0 0 chr2 100475903 100475944 -150211910 + (TA)n Simple_repeat Simple_repeat 2 42 0 241 244 58 35 chr2 100476292 100476378 -150211476 + L2 LINE L2 2885 2972 -342 798 234 81 5 chr2 100476421 100476610 -150211244 + MER58A DNA MER1_type 1 204 -20 848 165 147 0 chr2 100476610 100476780 -150211074 + MER20 DNA MER1_type 1 195 -24 2481 46 0 23 chr2 100476795 100477097 -150210757 + AluY SINE Alu 1 295 -16 324 380 9 9 chr2 100477238 100477351 -150210503 + L2 LINE L2 3142 3254 -18 1292 104 0 0 chr2 100477702 100477865 -150209989 - AluSg/x SINE Alu -13 299 137 2388 93 0 0 chr2 100478036 100478337 -150209517 - AluSx SINE Alu -11 301 1 374 282 45 0 chr2 100478364 100478474 -150209380 - MIR SINE MIR -101 161 47 1874 155 28 3 chr2 100479568 100479858 -150207996 - AluJb SINE Alu -15 297 1 2244 111 0 32 chr2 100479869 100480185 -150207669 - AluSq SINE Alu -7 306 1 2133 85 14 18 chr2 100480368 100480688 -150207166 + AluSx SINE Alu 1 319 0 606 240 90 43 chr2 100531451 100531684 -150156170 - MIR SINE MIR -10 252 9 367 178 68 0 chr2 100531686 100531759 -150156095 - LTR33A LTR ERVL -3 520 443 286 277 27 36 chr2 100531993 100532105 -150155749 - MLT2E LTR ERVL -483 145 35 2328 94 3 3 chr2 100532610 100532908 -150154946 + AluSx SINE Alu 1 298 -14 213 195 0 0 chr2 100532919 100532960 -150154894 + MER5B DNA MER1_type 1 41 -137 1500 196 16 82 chr2 100532967 100533335 -150154519 - MLT1A1 LTR MaLR 0 365 22 395 143 0 0 chr2 100534007 100534070 -150153784 - MER53 DNA DNA 0 189 127 232 94 0 0 chr2 100534114 100534146 -150153708 - MER53 DNA DNA -156 33 2 601 141 23 37 chr2 100535058 100535249 -150152605 + CT-rich Low_complexity Low_complexity 1 188 0 244 106 106 0 chr2 100535273 100535320 -150152534 - L1PA15 LINE L1 -1 6164 6113 315 71 0 0 chr2 100535894 100535936 -150151918 + (CA)n Simple_repeat Simple_repeat 2 43 0 189 0 0 0 chr2 100535935 100535956 -150151898 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 2413 104 0 0 chr2 100537293 100537602 -150150252 + AluSq SINE Alu 1 309 -4 263 309 41 8 chr2 100537620 100537743 -150150111 + L1MC5 LINE L1 7782 7908 -53 303 28 0 0 chr2 100537813 100537849 -150150005 + (TG)n Simple_repeat Simple_repeat 1 36 0 2374 93 3 0 chr2 100537908 100538208 -150149646 + AluSp SINE Alu 1 301 -12 607 220 21 14 chr2 100538462 100538603 -150149251 - AluSg/x SINE Alu -16 296 155 2266 112 3 13 chr2 100538708 100538886 -150148968 - AluSx SINE Alu -1 311 136 2365 97 0 3 chr2 100538886 100539184 -150148670 - AluSx SINE Alu -15 297 1 2266 112 3 13 chr2 100539184 100539317 -150148537 - AluSx SINE Alu -176 136 3 386 86 69 0 chr2 100539317 100539375 -150148479 - L1 LINE L1 -1976 4170 4109 228 213 93 67 chr2 100539389 100539464 -150148390 + MARNA DNA Mariner 241 317 -269 1054 186 9 5 chr2 100539464 100539679 -150148175 + L1P LINE L1 4283 4498 -1648 1474 192 26 57 chr2 100539760 100540146 -150147708 - MLT1A2 LTR MaLR 0 374 1 1826 126 71 46 chr2 100540694 100541060 -150146794 - THE1C LTR MaLR 0 375 1 4018 154 17 15 chr2 100541502 100542174 -150145680 - L1MB3 LINE L1 -12 6171 5496 2334 105 3 0 chr2 100542174 100542480 -150145374 - AluSx SINE Alu -5 307 1 4018 154 17 15 chr2 100542480 100542528 -150145326 - L1MB3 LINE L1 -687 5496 5450 253 250 19 0 chr2 100542575 100542627 -150145227 + MER94 DNA DNA 23 75 -59 208 262 24 60 chr2 100543280 100543364 -150144490 - MIR SINE MIR -80 182 102 7125 143 20 6 chr2 100543810 100545785 -150142069 - L1PA13 LINE L1 -3 6160 4164 2214 118 3 0 chr2 100545885 100546181 -150141673 - AluSx SINE Alu -15 297 1 556 227 40 33 chr2 100546181 100546331 -150141523 + L1ME3A LINE L1 3572 3722 -2424 * 2118 203 48 74 chr2 100546326 100546946 -150140908 + L1ME3A LINE L1 5470 6073 -97 1929 100 77 0 chr2 100547007 100547267 -150140587 + AluSq SINE Alu 1 280 -33 193 200 107 80 chr2 100547275 100547350 -150140504 - L2 LINE L2 -1379 1935 1859 445 272 61 7 chr2 100547351 100547498 -150140356 - MIR SINE MIR -107 155 1 234 62 0 0 chr2 100547844 100547876 -150139978 + (TG)n Simple_repeat Simple_repeat 2 33 0 486 0 0 0 chr2 100549498 100549552 -150138302 + (CA)n Simple_repeat Simple_repeat 1 54 0 1115 137 6 0 chr2 100550167 100550349 -150137505 + L1MA4 LINE L1 6085 6267 -33 1100 184 48 20 chr2 100550916 100551166 -150136688 - AluJb SINE Alu -29 283 27 974 180 0 0 chr2 100552065 100552226 -150135628 - FRAM SINE Alu -5 161 1 2067 128 6 6 chr2 100552378 100552690 -150135164 - AluSq SINE Alu -1 312 1 2175 95 0 14 chr2 100553355 100553649 -150134205 + AluY SINE Alu 1 290 -21 288 313 62 8 chr2 100554376 100554504 -150133350 - L2 LINE L2 -2 3270 3136 639 242 38 0 chr2 100555153 100555310 -150132544 - L1MC3 LINE L1 -21 7764 7602 2285 85 7 0 chr2 100555310 100555592 -150132262 - AluY SINE Alu -27 284 1 351 134 45 0 chr2 100555593 100555660 -150132194 - L1MD3 LINE L1 -944 7051 6982 240 326 23 12 chr2 100556273 100556359 -150131495 + L2 LINE L2 3227 3313 0 243 0 0 0 chr2 100557107 100557134 -150130720 + (A)n Simple_repeat Simple_repeat 1 27 0 853 120 17 0 chr2 100557288 100557405 -150130449 + AluSq/x SINE Alu 32 150 -163 772 176 31 13 chr2 100557639 100557798 -150130056 + L1MB8 LINE L1 6009 6170 -8 4941 97 32 1 chr2 100558273 100558966 -150128888 - L1PA11 LINE L1 0 6174 5461 1725 141 40 17 chr2 100560583 100560881 -150126973 - AluJb SINE Alu -7 305 1 253 200 56 78 chr2 100561825 100561915 -150125939 - L2 LINE L2 0 3272 3185 2479 89 0 0 chr2 100562576 100562878 -150124976 + AluSg SINE Alu 1 302 -8 401 84 211 0 chr2 100562917 100562988 -150124866 - L1MA2 LINE L1 -105 6199 6114 422 209 123 7 chr2 100563027 100563189 -150124665 - MIR SINE MIR -57 205 28 238 238 0 16 chr2 100563279 100563342 -150124512 + L2 LINE L2 3180 3241 -31 2183 120 0 0 chr2 100563480 100563763 -150124091 - AluSx SINE Alu -29 283 1 390 242 51 56 chr2 100564279 100564457 -150123397 + MER20B DNA MER1_type 1 177 -606 2210 127 0 0 chr2 100565892 100566200 -150121654 - AluSq SINE Alu -5 308 1 237 326 49 93 chr2 100567125 100567234 -150120620 - L2 LINE L2 -27 3245 3133 477 0 0 0 chr2 100567234 100567287 -150120567 + (CA)n Simple_repeat Simple_repeat 2 54 0 237 326 49 93 chr2 100567287 100567609 -150120245 - L2 LINE L2 -139 3133 2833 296 236 79 0 chr2 100567680 100567769 -150120085 + L1MD3 LINE L1 7887 7982 -13 481 274 132 28 chr2 100567858 100568183 -150119671 - L2 LINE L2 -687 2627 2269 349 311 8 8 chr2 100568937 100569069 -150118785 + MER94 DNA DNA 3 134 0 573 149 9 28 chr2 100570557 100570664 -150117190 - MLT1A1 LTR MaLR -260 105 1 358 271 28 9 chr2 100570664 100570771 -150117083 + MER5B DNA MER1_type 44 152 -26 182 189 0 0 chr2 100570984 100571021 -150116833 + MER5B DNA MER1_type 86 122 -56 * 368 206 24 147 chr2 100571014 100571184 -150116670 - MER5B DNA MER1_type -29 149 1 366 281 34 20 chr2 100572250 100572396 -150115458 - MIR3 SINE MIR -4 204 57 1098 146 0 0 chr2 100574132 100574296 -150113558 + FRAM SINE Alu 1 161 -15 1773 164 24 7 chr2 100574833 100575131 -150112723 - AluJb SINE Alu -9 303 1 186 243 14 43 chr2 100575657 100575727 -150112127 - MIR SINE MIR -181 81 14 203 224 92 26 chr2 100577704 100577780 -150110074 - L2 LINE L2 -23 3249 3169 203 297 0 54 chr2 100579116 100579190 -150108664 - MIR SINE MIR -35 227 158 2176 139 0 0 chr2 100579255 100579557 -150108297 - AluSx SINE Alu -10 302 1 238 365 8 16 chr2 100580432 100580558 -150107296 + MIR SINE MIR 88 212 -50 1877 123 39 36 chr2 100580970 100581279 -150106575 + AluSx SINE Alu 1 310 -2 398 198 123 28 chr2 100582068 100582174 -150105680 + L1MB3 LINE L1 6066 6181 -2 1967 125 52 0 chr2 100582602 100582874 -150104980 + AluSx SINE Alu 10 295 -17 183 80 0 0 chr2 100583674 100583699 -150104155 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 446 304 59 20 chr2 100585064 100585268 -150102586 - MIR SINE MIR -18 244 33 1591 188 17 31 chr2 100585351 100585638 -150102216 + AluJo SINE Alu 1 283 -29 485 164 3 51 chr2 100585638 100585938 -150101916 + (TA)n Simple_repeat Simple_repeat 1 285 0 357 24 0 0 chr2 100585949 100585991 -150101863 + (TG)n Simple_repeat Simple_repeat 1 42 0 1718 166 50 82 chr2 100586678 100586745 -150101109 - MSTB2 LTR MaLR 0 457 389 2320 91 24 0 chr2 100586745 100587043 -150100811 + AluSx SINE Alu 1 305 -7 1718 166 50 82 chr2 100587043 100587439 -150100415 - MSTB2 LTR MaLR -68 389 9 427 143 0 65 chr2 100587797 100587874 -150099980 - AluSq SINE Alu -160 153 82 26 88 0 0 chr2 100587876 100587944 -150099910 + AT_rich Low_complexity Low_complexity 1 68 0 225 269 172 0 chr2 100587954 100588047 -150099807 - MIR SINE MIR -123 139 31 21 0 0 0 chr2 100591134 100591155 -150096699 + AT_rich Low_complexity Low_complexity 1 21 0 2105 126 3 0 chr2 100591163 100591456 -150096398 + AluSx SINE Alu 1 294 -18 1414 296 116 60 chr2 100594097 100595299 -150092555 - L2 LINE L2 -85 3187 1860 193 261 113 26 chr2 100595346 100595461 -150092393 - L2 LINE L2 -1768 1546 1422 4063 224 57 13 chr2 100595631 100597144 -150090710 + L1MDa LINE L1 2289 3874 -2666 1130 50 0 22 chr2 100597180 100597319 -150090535 + AluYb8 SINE Alu 1 136 -182 2522 18 7 3 chr2 100597419 100597702 -150090152 - AluY SINE Alu -27 284 1 189 299 75 61 chr2 100599780 100599927 -150087927 + L2 LINE L2 2941 3089 -183 1992 98 73 0 chr2 100601144 100601419 -150086435 - AluSx SINE Alu -17 295 1 325 202 48 36 chr2 100601819 100601903 -150085951 - MER33 DNA MER1_type 0 363 279 1999 142 7 0 chr2 100601926 100602222 -150085632 - AluSg SINE Alu -10 300 3 38 22 0 0 chr2 100602224 100602269 -150085585 + AT_rich Low_complexity Low_complexity 1 45 0 697 235 80 19 chr2 100602272 100602485 -150085369 - MER33 DNA MER1_type -96 228 3 306 123 0 0 chr2 100603153 100603210 -150084644 + (A)n Simple_repeat Simple_repeat 1 57 0 1637 171 44 7 chr2 100603874 100604167 -150083687 - AluJo SINE Alu -8 304 1 238 300 0 0 chr2 100604916 100604966 -150082888 + MIR SINE MIR 30 79 -129 2350 88 0 0 chr2 100607344 100607639 -150080215 - AluSg SINE Alu -15 295 1 4496 207 78 19 chr2 100608704 100609563 -150078291 - L1MD2 LINE L1 -2 6751 5796 2221 112 7 0 chr2 100609563 100609859 -150077995 - AluSx SINE Alu -14 298 1 4496 207 78 19 chr2 100609859 100610241 -150077613 - L1MD2 LINE L1 -957 5796 5438 1507 168 24 0 chr2 100610242 100610492 -150077362 - MLT1D LTR MaLR -2 503 248 458 160 53 21 chr2 100610511 100610605 -150077249 - MLT1D LTR MaLR -408 97 1 493 192 0 29 chr2 100610624 100610728 -150077126 - L1MD2 LINE L1 -1145 5395 5295 822 141 17 45 chr2 100610731 100610908 -150076946 - L1MD2 LINE L1 -3944 2596 2425 905 198 6 6 chr2 100610908 100611080 -150076774 - FRAM SINE Alu -4 172 1 1761 252 31 12 chr2 100611080 100611561 -150076293 - L1MD2 LINE L1 -4108 2432 1943 345 279 68 59 chr2 100612108 100612327 -150075527 - L2 LINE L2 -1041 2273 2053 2399 104 0 0 chr2 100612811 100613120 -150074734 + AluSq SINE Alu 1 309 -4 476 320 17 17 chr2 100613167 100613342 -150074512 + MER5B DNA MER1_type 3 177 -1 221 242 32 16 chr2 100613418 100613480 -150074374 + MER5B DNA MER1_type 113 175 -3 22 0 0 0 chr2 100614558 100614580 -150073274 + AT_rich Low_complexity Low_complexity 1 22 0 204 292 0 28 chr2 100615055 100615127 -150072727 + CT-rich Low_complexity Low_complexity 6 75 0 1059 108 0 161 chr2 100615208 100615431 -150072423 + MER53 DNA DNA 1 187 -2 630 246 8 0 chr2 100616328 100616450 -150071404 + FLAM_A SINE Alu 1 123 -19 699 235 155 0 chr2 100616450 100616650 -150071204 + MIR SINE MIR 24 254 -8 22 0 0 0 chr2 100616775 100616797 -150071057 + AT_rich Low_complexity Low_complexity 1 22 0 362 306 112 12 chr2 100617195 100617365 -150070489 + MIR SINE MIR 21 207 -55 185 229 0 0 chr2 100617431 100617466 -150070388 + MIR SINE MIR 201 235 -27 1860 137 48 10 chr2 100617473 100617766 -150070088 - AluSx SINE Alu -8 304 1 519 252 76 43 chr2 100618453 100618663 -150069191 + MIR SINE MIR 28 244 -18 333 333 29 0 chr2 100619552 100619690 -150068164 + MIR SINE MIR 109 250 -12 285 238 238 13 chr2 100619798 100619949 -150067905 - MER112 DNA MER1_type -66 194 10 3334 143 19 13 chr2 100619951 100620488 -150067366 + L1MB3 LINE L1 5639 6178 -5 2112 87 11 0 chr2 100620488 100620763 -150067091 - AluSc SINE Alu -11 298 21 36 0 0 0 chr2 100620763 100620799 -150067055 + AT_rich Low_complexity Low_complexity 1 36 0 2153 107 7 10 chr2 100620919 100621217 -150066637 - AluSx SINE Alu -15 297 1 22 35 0 0 chr2 100622062 100622091 -150065763 + AT_rich Low_complexity Low_complexity 1 29 0 2442 74 0 3 chr2 100622891 100623188 -150064666 - AluY SINE Alu -15 296 1 490 322 145 0 chr2 100623548 100623775 -150064079 + MIR SINE MIR 2 261 -1 257 0 0 29 chr2 100623799 100623817 -150064037 + (TA)n Simple_repeat Simple_repeat 2 20 -14 2249 99 0 7 chr2 100623817 100624109 -150063745 + AluSg SINE Alu 1 290 -20 257 0 0 29 chr2 100624109 100624124 -150063730 + (TA)n Simple_repeat Simple_repeat 20 34 0 5307 225 76 31 chr2 100624174 100625970 -150061884 - L1ME2 LINE L1 -219 5879 3965 2407 71 0 3 chr2 100625970 100626267 -150061587 - AluY SINE Alu -15 296 1 5307 225 76 31 chr2 100626267 100626753 -150061101 - L1ME2 LINE L1 -2133 3965 3502 2947 274 88 53 chr2 100626813 100626985 -150060869 - L1ME2 LINE L1 -3873 2388 2224 2187 48 48 0 chr2 100626985 100627290 -150060564 + AluY SINE Alu 1 318 0 2947 274 88 53 chr2 100627290 100627375 -150060479 - L1ME2 LINE L1 -4037 2224 2143 2388 186 24 24 chr2 100627375 100627832 -150060022 + MSTB2 LTR MaLR 1 457 0 2947 274 88 53 chr2 100627832 100628465 -150059389 - L1ME2 LINE L1 -4118 2143 1534 2349 112 0 0 chr2 100628465 100628770 -150059084 + AluSc SINE Alu 1 305 -4 2947 274 88 53 chr2 100628770 100629683 -150058171 - L1ME2 LINE L1 -4727 1534 518 901 309 61 48 chr2 100629889 100630346 -150057508 - L1ME2 LINE L1 -5607 463 1 2080 158 22 76 chr2 100630917 100631327 -150056527 + MLT1B LTR MaLR 1 388 -2 2302 118 0 0 chr2 100631484 100631789 -150056065 - AluSx SINE Alu -7 305 1 222 200 0 77 chr2 100631794 100631859 -150055995 + MIR SINE MIR 105 164 -98 2293 95 0 13 chr2 100632184 100632489 -150055365 - AluSg SINE Alu -9 301 1 1699 146 96 0 chr2 100632564 100632845 -150055009 - AluSx SINE Alu -4 308 1 29 28 0 0 chr2 100633052 100633088 -150054766 + AT_rich Low_complexity Low_complexity 1 36 0 2426 93 0 0 chr2 100634774 100635076 -150052778 - AluSx SINE Alu -10 302 1 257 221 29 0 chr2 100637203 100637271 -150050583 + (TA)n Simple_repeat Simple_repeat 1 70 0 182 289 0 0 chr2 100637305 100637350 -150050504 + L2 LINE L2 3213 3257 -15 2204 101 7 3 chr2 100637731 100638027 -150049827 - AluSg SINE Alu -13 297 1 2030 141 0 13 chr2 100638173 100638472 -150049382 - AluSx SINE Alu -17 295 1 239 226 157 43 chr2 100638487 100638602 -150049252 - HAL1b LINE L1 -428 920 793 261 252 129 29 chr2 100638669 100638808 -150049046 - HAL1b LINE L1 -446 902 750 2453 61 24 3 chr2 100639287 100639582 -150048272 + AluY SINE Alu 1 301 -10 644 313 107 8 chr2 100639663 100640190 -150047664 - L1ME3A LINE L1 -230 5923 5349 2397 71 3 3 chr2 100640312 100640607 -150047247 + AluY SINE Alu 1 295 -16 207 0 0 0 chr2 100640611 100640634 -150047220 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3638 276 111 43 chr2 100640637 100642709 -150045145 - L1ME3A LINE L1 -924 5205 2881 2154 121 0 0 chr2 100642709 100643007 -150044847 - AluSx SINE Alu -14 298 1 3638 276 111 43 chr2 100643007 100643815 -150044039 - L1ME3A LINE L1 -3248 2881 2129 2528 73 0 0 chr2 100643823 100644124 -150043730 - AluSx SINE Alu -11 301 1 326 316 84 18 chr2 100644553 100644778 -150043076 - L1ME3A LINE L1 -4653 1657 1418 990 248 91 58 chr2 100644807 100645442 -150042412 - L1MEd LINE L1 -4869 1250 663 403 265 65 82 chr2 100645475 100645754 -150042100 - HAL1 LINE L1 -1291 1216 943 23 33 0 0 chr2 100645814 100645844 -150042010 + AT_rich Low_complexity Low_complexity 1 30 0 8277 20 23 2 chr2 100647029 100648352 -150039502 - L1PA3 LINE L1 -3 6152 4818 6370 29 0 0 chr2 100648352 100649086 -150038768 + L1PA3 LINE L1 4059 4792 -1354 1670 191 41 7 chr2 100649288 100649582 -150038272 + AluJo SINE Alu 1 304 -8 299 284 131 50 chr2 100649840 100650062 -150037792 + MIR SINE MIR 8 247 -15 5047 158 31 29 chr2 100651587 100652771 -150035083 - L1MB5 LINE L1 -8 6166 4994 1746 126 20 4 chr2 100653093 100653347 -150034507 + L1PB3 LINE L1 5897 6154 0 201 176 0 0 chr2 100654167 100654201 -150033653 + A-rich Low_complexity Low_complexity 1 34 0 2221 92 0 3 chr2 100654236 100654544 -150033310 - AluSq SINE Alu 0 307 1 980 132 60 12 chr2 100654551 100654718 -150033136 - AluJo SINE Alu -19 293 119 605 187 32 0 chr2 100656109 100656232 -150031622 - L1MA9 LINE L1 -323 5989 5863 838 127 110 98 chr2 100656275 100656520 -150031334 + L1MA9 LINE L1 6064 6311 -1 318 231 0 0 chr2 100656949 100657014 -150030840 + MER58 DNA MER1_type 2356 2420 0 322 339 58 21 chr2 100657045 100657234 -150030620 + L1MC4a LINE L1 4786 4981 -1165 253 297 31 31 chr2 100657484 100657612 -150030242 + L1MC4a LINE L1 5391 5518 -666 2047 131 6 13 chr2 100657617 100657931 -150029923 - AluJo SINE Alu 0 312 1 402 273 68 28 chr2 100658040 100658216 -150029638 + L1MC4a LINE L1 5704 5886 -1922 1958 153 10 0 chr2 100658307 100658607 -150029247 - AluSx SINE Alu -9 303 1 2218 102 3 0 chr2 100660307 100660614 -150027240 - AluSx SINE Alu 0 308 1 2369 86 7 0 chr2 100662477 100662781 -150025073 - AluSp SINE Alu -7 306 1 353 346 114 60 chr2 100663472 100664703 -150023151 + L2 LINE L2 1242 2538 -776 * 669 288 34 0 chr2 100664666 100664843 -150023011 - MIR SINE MIR 0 262 80 266 289 61 110 chr2 100665006 100665269 -150022585 + L2 LINE L2 2998 3247 -25 229 314 141 27 chr2 100665339 100665514 -150022340 + L2 LINE L2 2553 2751 -563 2172 102 3 16 chr2 100665514 100665818 -150022036 + AluSx SINE Alu 1 300 -12 207 167 0 0 chr2 100665843 100665885 -150021969 + (ATG)n Simple_repeat Simple_repeat 1 42 0 272 265 153 18 chr2 100665956 100666069 -150021785 - MIR SINE MIR -70 138 30 217 212 88 106 chr2 100667198 100667311 -150020543 + MIR SINE MIR 138 248 -14 708 225 8 0 chr2 100668140 100668269 -150019585 - FLAM_A SINE Alu 0 133 4 2255 100 3 3 chr2 100669339 100669638 -150018216 - AluSx SINE Alu -13 299 1 255 272 49 49 chr2 100669723 100669804 -150018050 + L2 LINE L2 3145 3225 -47 838 193 0 0 chr2 100670615 100670760 -150017094 + FRAM SINE Alu 1 145 -31 511 288 74 37 chr2 100672630 100672873 -150014981 + MIR SINE MIR 8 259 -3 264 264 27 45 chr2 100674362 100674472 -150013382 - L2 LINE L2 -48 3265 3158 1912 71 50 0 chr2 100674887 100675126 -150012728 + AluY SINE Alu 1 251 -60 16272 128 29 8 chr2 100675680 100678188 -150009666 - L1M1 LINE L1 -4381 3184 623 3002 118 47 11 chr2 100678188 100678637 -150009217 + L1PA11 LINE L1 5710 6174 0 205 303 92 9 chr2 100678959 100679068 -150008786 - MIR SINE MIR -87 175 58 229 278 21 21 chr2 100679309 100679406 -150008448 + GA-rich Low_complexity Low_complexity 2 98 0 313 277 139 0 chr2 100680435 100680536 -150007318 + L2 LINE L2 3199 3313 0 252 331 26 13 chr2 100680559 100680710 -150007144 - MARNA DNA Mariner -24 562 410 222 115 58 39 chr2 100680729 100680781 -150007073 + (TTGGGG)n Simple_repeat Simple_repeat 1 53 0 453 299 98 25 chr2 100680791 100680903 -150006951 - MARNA DNA Mariner -239 347 245 8740 118 90 5 chr2 100680903 100682916 -150004938 + L1PA11 LINE L1 4103 6174 0 453 299 98 25 chr2 100682916 100683047 -150004807 - MARNA DNA Mariner -341 245 86 268 326 34 0 chr2 100682975 100683064 -150004790 + MARNA DNA Mariner 427 518 -68 * 255 114 0 0 chr2 100685144 100685188 -150002666 + (A)n Simple_repeat Simple_repeat 1 44 0 249 98 16 49 chr2 100685411 100685472 -150002382 + (TTCTCC)n Simple_repeat Simple_repeat 4 62 0 258 231 31 0 chr2 100685485 100685550 -150002304 + L2 LINE L2 3246 3312 -1 2940 216 41 10 chr2 100685794 100686080 -150001774 - L1M4 LINE L1 -1593 4553 4277 516 32 0 0 chr2 100686080 100686142 -150001712 + (TG)n Simple_repeat Simple_repeat 1 62 0 2940 216 41 10 chr2 100686142 100686585 -150001269 - L1M4 LINE L1 -1869 4277 3801 1559 141 68 0 chr2 100686743 100686992 -150000862 - L1PB4 LINE L1 -6 6150 5885 298 317 106 8 chr2 100686997 100687118 -150000736 - MIR SINE MIR -62 146 31 2569 281 160 13 chr2 100687270 100688672 -149999182 + L2 LINE L2 1638 3254 -59 840 243 14 14 chr2 100688672 100688890 -149998964 + MER58A DNA MER1_type 4 221 -3 2569 281 160 13 chr2 100688890 100688947 -149998907 + L2 LINE L2 3254 3301 -12 204 40 0 0 chr2 100688949 100688974 -149998880 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 2056 97 0 4 chr2 100692956 100693225 -149994629 - AluSx SINE Alu -12 300 33 345 254 53 61 chr2 100693367 100693518 -149994336 + MIR SINE MIR 35 182 -54 285 29 0 0 chr2 100694935 100694969 -149992885 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 6390 143 54 19 chr2 100695122 100696311 -149991543 + Tigger3b DNA MER2_type 1 1231 0 1671 165 16 44 chr2 100696363 100696679 -149991175 + AluJo SINE Alu 1 307 -5 942 150 42 0 chr2 100697796 100697963 -149989891 + MER20 DNA MER1_type 46 219 0 832 239 63 14 chr2 100698004 100698378 -149989476 + L1ME2 LINE L1 5626 6005 -161 1366 214 48 24 chr2 100698438 100698774 -149989080 + MER2 DNA MER2_type 1 344 0 2779 205 58 14 chr2 100698776 100699396 -149988458 - MER82 DNA MER2_type 0 653 7 1458 181 25 25 chr2 100699434 100699715 -149988139 + AluJb SINE Alu 32 312 0 888 252 88 14 chr2 100699734 100700211 -149987643 - L1M4 LINE L1 -2034 4112 3672 2212 167 33 19 chr2 100700211 100700631 -149987223 + MSTB LTR MaLR 1 426 0 888 252 88 14 chr2 100700631 100701389 -149986465 - L1M4 LINE L1 -2474 3672 2716 * 1110 307 78 29 chr2 100701385 100702157 -149985697 - L1MEc LINE L1 -5531 865 56 212 349 0 0 chr2 100702163 100702229 -149985625 + L2 LINE L2 2684 2749 -565 2301 119 24 71 chr2 100702303 100702756 -149985098 + L1PB4 LINE L1 5712 6143 -13 190 359 47 19 chr2 100702908 100703014 -149984840 + L2 LINE L2 2932 3040 -232 4688 250 81 43 chr2 100703626 100706114 -149981740 + L1MEc LINE L1 112 2664 -3551 817 252 11 7 chr2 100706150 100706436 -149981418 + L1M4 LINE L1 4214 4500 -1646 273 261 45 54 chr2 100706439 100706661 -149981193 + L1ME1 LINE L1 1082 1301 -5095 2813 226 50 34 chr2 100706689 100708216 -149979638 + L1ME1 LINE L1 4570 6127 -108 314 225 90 0 chr2 100708276 100708365 -149979489 + L1MA10 LINE L1 6225 6321 -13 1935 138 24 7 chr2 100709594 100709884 -149977970 + AluJo SINE Alu 1 295 -17 3251 179 40 0 chr2 100709908 100710585 -149977269 - L1PB3 LINE L1 -1736 4410 3707 * 5521 155 9 5 chr2 100710584 100712297 -149975557 + L1PB3 LINE L1 4433 6151 -3 209 295 66 0 chr2 100712594 100712655 -149975199 - L2 LINE L2 -50 3222 3158 342 0 0 0 chr2 100713022 100713060 -149974794 + (CA)n Simple_repeat Simple_repeat 2 39 0 311 324 34 61 chr2 100713465 100713613 -149974241 - L2 LINE L2 0 3313 3170 219 137 176 0 chr2 100713979 100714030 -149973824 + L2 LINE L2 3213 3272 0 408 295 191 16 chr2 100714525 100714776 -149973078 - L3 LINE CR1 -1 1576 1282 1810 157 29 0 chr2 100714781 100715124 -149972730 + LTR53 LTR ERVL 1 353 -166 1996 204 75 0 chr2 100715484 100715979 -149971875 - L1MA10 LINE L1 -10 6324 5793 303 216 24 24 chr2 100716104 100716229 -149971625 + (TA)n Simple_repeat Simple_repeat 1 125 0 234 91 0 0 chr2 100716229 100716262 -149971592 + (GA)n Simple_repeat Simple_repeat 2 34 0 295 89 36 0 chr2 100717196 100717252 -149970602 + CT-rich Low_complexity Low_complexity 2 59 0 465 355 60 26 chr2 100717349 100717617 -149970237 + L3 LINE CR1 790 1066 -511 4092 170 7 3 chr2 100718015 100718743 -149969111 + HERVE LTR ERV1 4806 5536 -2277 266 271 0 0 chr2 100720233 100720303 -149967551 + SST1 Satellite centromeric 1148 1217 -346 1305 239 3 13 chr2 100720384 100720693 -149967161 + HERVE LTR ERV1 4376 4681 -3132 1756 147 0 8 chr2 100720904 100721169 -149966685 - AluSc SINE Alu -8 301 39 1236 237 27 18 chr2 100721597 100722048 -149965806 - L1P LINE L1 -2751 3395 2941 479 254 63 95 chr2 100722274 100722526 -149965328 + LTR1B LTR ERV1 583 826 0 180 152 0 0 chr2 100722871 100722904 -149964950 + A-rich Low_complexity Low_complexity 1 33 0 806 166 140 31 chr2 100723255 100723448 -149964406 - MSTA LTR MaLR -13 415 202 23 0 0 0 chr2 100725367 100725390 -149962464 + AT_rich Low_complexity Low_complexity 1 23 0 30 69 0 0 chr2 100725538 100725596 -149962258 + AT_rich Low_complexity Low_complexity 1 58 0 243 149 15 30 chr2 100726187 100726254 -149961600 + (TA)n Simple_repeat Simple_repeat 1 66 0 1302 197 7 4 chr2 100726539 100726813 -149961041 - L1PA16 LINE L1 -109 6057 5783 195 49 73 0 chr2 100726814 100726855 -149960999 + (TA)n Simple_repeat Simple_repeat 1 44 0 350 105 0 0 chr2 100726859 100726924 -149960930 - L1MA10 LINE L1 -389 5779 5724 284 261 53 17 chr2 100727036 100727215 -149960639 + L1ME3A LINE L1 5727 5923 -247 1697 159 0 7 chr2 100728161 100728463 -149959391 - THE1-int LTR MaLR -246 1334 1035 3127 168 24 22 chr2 100728850 100729481 -149958373 - THE1-int LTR MaLR -534 1046 415 2001 136 3 7 chr2 100729588 100729890 -149957964 - AluSg SINE Alu -8 302 2 247 267 58 110 chr2 100730579 100730770 -149957084 - L2 LINE L2 -919 2395 2215 302 309 181 7 chr2 100732745 100732894 -149954960 - MIR SINE MIR -59 203 29 231 266 109 0 chr2 100733318 100733382 -149954472 + L2 LINE L2 3225 3295 -18 201 39 0 0 chr2 100733954 100733980 -149953874 + (TG)n Simple_repeat Simple_repeat 2 27 0 1450 229 86 21 chr2 100733982 100734450 -149953404 - MLT1D LTR MaLR -7 498 1 309 264 0 73 chr2 100734622 100734732 -149953122 - MIR SINE MIR -50 212 111 243 0 0 0 chr2 100737552 100737579 -149950275 + (CCA)n Simple_repeat Simple_repeat 2 28 0 1301 116 0 0 chr2 100738175 100738348 -149949506 - AluSg/x SINE Alu -16 296 124 912 142 56 0 chr2 100738558 100738720 -149949134 - L1MB3 LINE L1 -2 6181 6011 2328 235 186 20 chr2 100738808 100739132 -149948722 - L1MCb LINE L1 -4502 2062 1793 189 0 0 0 chr2 100739132 100739153 -149948701 + (TC)n Simple_repeat Simple_repeat 2 22 0 2328 235 186 20 chr2 100739153 100740108 -149947746 - L1MCb LINE L1 -4771 1793 561 848 176 0 0 chr2 100740876 100741007 -149946847 - FLAM_A SINE Alu -2 131 1 1149 129 101 32 chr2 100741399 100741616 -149946238 + MER46A DNA MER2_type 1 232 -4 6811 134 16 39 chr2 100743417 100744191 -149943663 - Tigger3b DNA MER2_type -1797 1231 441 2102 133 3 0 chr2 100744191 100744493 -149943361 - AluSx SINE Alu -9 303 1 6811 134 16 39 chr2 100744493 100744686 -149943168 - Tigger3b DNA MER2_type -2587 441 293 1329 99 33 86 chr2 100744686 100744929 -149942925 + MER30 DNA MER1_type 1 230 0 6811 134 16 39 chr2 100744929 100745142 -149942712 - Tigger3b DNA MER2_type -2735 293 77 233 192 341 0 chr2 100745383 100745481 -149942373 + MIR SINE MIR 22 145 -63 236 185 0 19 chr2 100745637 100745691 -149942163 + G-rich Low_complexity Low_complexity 2 54 0 2559 148 50 17 chr2 100746970 100747431 -149940423 + L1PA16 LINE L1 5691 6166 0 2328 95 3 0 chr2 100747441 100747735 -149940119 - AluSp SINE Alu -18 295 1 203 108 54 0 chr2 100749294 100749331 -149938523 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 2150 107 3 7 chr2 100749336 100749634 -149938220 - AluSx SINE Alu -15 297 1 309 263 145 13 chr2 100749779 100749931 -149937923 - L2 LINE L2 -190 3082 2911 214 308 202 32 chr2 100749987 100750886 -149936968 - L2 LINE L2 -443 2871 1820 236 176 0 0 chr2 100750973 100751024 -149936830 - L1MC4 LINE L1 -1339 6703 6653 235 222 0 0 chr2 100751142 100751196 -149936658 + L2 LINE L2 3181 3234 -38 495 203 146 57 chr2 100751374 100751532 -149936322 + MER106B DNA MER1_type 42 1036 -23 1473 120 16 12 chr2 100752275 100752525 -149935329 - MER6 DNA MER2_type 0 865 615 738 54 0 0 chr2 100752525 100752618 -149935236 + L1P LINE L1 5060 5152 -994 579 328 68 37 chr2 100752829 100753238 -149934616 - LTR67 LTR ERVL -9 548 127 2232 102 26 0 chr2 100753276 100753544 -149934310 + AluSx SINE Alu 1 279 -33 360 0 0 0 chr2 100753544 100753584 -149934270 + (TAA)n Simple_repeat Simple_repeat 3 42 0 2232 102 26 0 chr2 100753584 100753619 -149934235 + AluSx SINE Alu 279 312 0 24 32 0 0 chr2 100754144 100754175 -149933679 + AT_rich Low_complexity Low_complexity 1 31 0 1822 141 7 20 chr2 100755380 100755677 -149932177 - AluJb SINE Alu -18 294 2 202 135 0 0 chr2 100755945 100755982 -149931872 - L2 LINE L2 -3 3269 3233 248 303 74 3 chr2 100757424 100757552 -149930302 + MIR SINE MIR 6 123 -139 1813 130 85 3 chr2 100757552 100757882 -149929972 + MER46B DNA MER2_type 1 232 -4 248 303 74 3 chr2 100757882 100757929 -149929925 + MIR SINE MIR 123 243 -19 21 36 0 0 chr2 100757954 100757982 -149929872 + AT_rich Low_complexity Low_complexity 1 28 0 375 183 0 0 chr2 100758219 100758290 -149929564 - Charlie1a DNA MER1_type -505 950 880 816 187 9 103 chr2 100758290 100758504 -149929350 + L1PA16 LINE L1 5973 6166 0 2532 65 3 7 chr2 100758507 100758814 -149929040 + AluY SINE Alu 1 306 -5 495 0 0 0 chr2 100759176 100759231 -149928623 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 3555 195 66 19 chr2 100759233 100760019 -149927835 - Charlie1a DNA MER1_type -568 887 65 411 310 7 7 chr2 100760074 100760219 -149927635 + MIR SINE MIR 89 233 -29 2489 57 0 10 chr2 100760474 100760773 -149927081 + AluY SINE Alu 1 296 -15 1380 195 57 46 chr2 100761203 100761640 -149926214 + L1MC4 LINE L1 7619 7994 -1 340 298 154 29 chr2 100761714 100762161 -149925693 + L2 LINE L2 2811 3313 0 1742 315 113 13 chr2 100762404 100763453 -149924401 + L2 LINE L2 1824 2977 -337 196 257 57 0 chr2 100763888 100763958 -149923896 - L2 LINE L2 -940 2374 2301 317 260 26 0 chr2 100764414 100764491 -149923363 - L2 LINE L2 0 3313 3235 311 119 0 17 chr2 100768637 100768696 -149919158 + (TC)n Simple_repeat Simple_repeat 1 58 0 1002 145 85 5 chr2 100770767 100770967 -149916887 - L1MA7 LINE L1 -1 6290 6075 2093 122 0 17 chr2 100770989 100771285 -149916569 - AluSx SINE Alu -21 291 1 21 0 0 0 chr2 100774252 100774273 -149913581 + AT_rich Low_complexity Low_complexity 1 21 0 402 322 82 5 chr2 100774305 100774513 -149913341 - MIR SINE MIR -7 255 32 893 161 19 19 chr2 100775710 100775871 -149911983 - FAM SINE Alu -13 172 12 497 204 74 68 chr2 100776113 100776251 -149911603 - MER69A DNA AcHobo -2349 177 36 2268 93 3 3 chr2 100776251 100776541 -149911313 - AluSp SINE Alu -23 290 1 497 204 74 68 chr2 100776541 100776578 -149911276 - MER69A DNA AcHobo -2490 36 1 2552 170 62 22 chr2 100777492 100778027 -149909827 - MER74A LTR ERVL 0 558 3 299 281 0 21 chr2 100778268 100778364 -149909490 - MIR SINE MIR -58 150 57 2523 61 0 0 chr2 100778410 100778703 -149909151 - AluY SINE Alu -18 293 1 1143 196 123 49 chr2 100779948 100780274 -149907580 + MLT1A1 LTR MaLR 3 352 -13 376 317 97 0 chr2 100780442 100780587 -149907267 + MIR SINE MIR 29 187 -75 815 72 65 58 chr2 100780587 100780725 -149907129 + MER85 DNA T2_type 1 139 0 248 221 0 15 chr2 100780915 100780983 -149906871 + GA-rich Low_complexity Low_complexity 2 68 0 2618 40 0 23 chr2 100781052 100781356 -149906498 - AluY SINE Alu -14 297 1 2206 90 10 16 chr2 100782836 100783147 -149904707 - AluY SINE Alu -2 309 1 199 135 77 0 chr2 100787254 100787306 -149900548 + (CATG)n Simple_repeat Simple_repeat 3 58 0 433 334 104 28 chr2 100787714 100788187 -149899667 + L2 LINE L2 2377 2885 -429 709 231 40 0 chr2 100789342 100789515 -149898339 - MER104 DNA MER2_type 0 180 1 301 284 14 0 chr2 100789529 100789603 -149898251 + L2 LINE L2 3238 3312 -1 186 311 40 0 chr2 100792031 100792105 -149895749 + L2 LINE L2 2501 2577 -737 471 317 42 6 chr2 100792429 100792596 -149895258 - MIR SINE MIR -69 193 21 907 208 15 136 chr2 100792641 100793030 -149894824 + MLT2C1 LTR ERVL 1 342 -55 261 0 0 0 chr2 100793056 100793085 -149894769 + (CA)n Simple_repeat Simple_repeat 2 30 0 25 0 0 0 chr2 100793520 100793545 -149894309 + AT_rich Low_complexity Low_complexity 1 25 0 829 204 60 0 chr2 100793838 100794005 -149893849 - AluSg/x SINE Alu 0 310 134 6854 25 3 11 chr2 100794432 100795615 -149892239 + L1PA4 LINE L1 4885 6058 -97 461 35 0 0 chr2 100795612 100795670 -149892184 + L1PA4 LINE L1 5997 6054 -101 * 1358 50 0 0 chr2 100795671 100795830 -149892024 + L1PA4 LINE L1 5997 6155 0 774 108 8 8 chr2 100796110 100796230 -149891624 + MLT1B LTR MaLR 1 120 -270 21 0 0 0 chr2 100796231 100796252 -149891602 + AT_rich Low_complexity Low_complexity 1 21 0 512 216 0 0 chr2 100798059 100798156 -149889698 + MLT1G1 LTR MaLR 492 588 -7 5912 199 72 56 chr2 100798491 100799929 -149887925 + L1MC4 LINE L1 6354 7768 -274 1971 97 61 21 chr2 100799929 100800208 -149887646 + AluSg SINE Alu 1 290 -20 5912 199 72 56 chr2 100800208 100800225 -149887629 + L1MC4 LINE L1 7768 7783 -259 216 0 0 0 chr2 100800225 100800249 -149887605 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 5912 199 72 56 chr2 100800249 100800443 -149887411 + L1MC4 LINE L1 7783 8030 -12 551 172 138 69 chr2 100800852 100800997 -149886857 + MER45A DNA AcHobo 23 177 -1 774 238 33 14 chr2 100801135 100801349 -149886505 + L1MC4 LINE L1 7427 7644 -398 409 319 161 40 chr2 100801482 100801786 -149886068 + L2 LINE L2 2951 3291 -22 427 280 140 2 chr2 100802546 100802728 -149885126 - LTR33 LTR ERVL -336 185 1 4131 227 81 70 chr2 100804976 100808004 -149879850 + L1ME2 LINE L1 3094 6154 -10 27 29 0 0 chr2 100809150 100809184 -149878670 + AT_rich Low_complexity Low_complexity 1 34 0 1969 146 3 10 chr2 100810172 100810467 -149877387 - AluJb SINE Alu -14 298 6 444 224 84 37 chr2 100810744 100810851 -149877003 + L2 LINE L2 3158 3269 -3 203 321 18 0 chr2 100811070 100811126 -149876728 + L2 LINE L2 3207 3263 -9 193 333 139 9 chr2 100811330 100811438 -149876416 - L2 LINE L2 -6 3266 3145 28 29 0 0 chr2 100812138 100812173 -149875681 + AT_rich Low_complexity Low_complexity 1 35 0 3534 109 0 2 chr2 100812563 100813041 -149874813 + L1PA13 LINE L1 5684 6160 -3 2522 99 19 40 chr2 100813117 100813489 -149874365 + THE1B LTR MaLR 1 364 0 1853 101 4 0 chr2 100814405 100814652 -149873202 + AluSp SINE Alu 66 313 0 22 0 0 0 chr2 100814812 100814834 -149873020 + AT_rich Low_complexity Low_complexity 1 22 0 271 213 25 0 chr2 100815799 100815879 -149871975 + CT-rich Low_complexity Low_complexity 1 82 0 434 141 14 0 chr2 100816613 100816684 -149871170 - MADE1 DNA Mariner 0 80 9 2097 132 0 0 chr2 100816920 100817209 -149870645 + AluSx SINE Alu 1 289 -23 1784 76 36 5 chr2 100817393 100817616 -149870238 - MER30 DNA MER1_type 0 230 1 3980 62 0 14 chr2 100818628 100819113 -149868741 - L1PA8 LINE L1 -14 6158 5681 7406 63 13 0 chr2 100820018 100821207 -149866647 + L1PA8 LINE L1 4970 6170 -2 2972 182 55 32 chr2 100821225 100821376 -149866478 - MER6 DNA MER2_type -236 629 483 1994 115 58 0 chr2 100821376 100821671 -149866183 + AluSx SINE Alu 1 312 0 2972 182 55 32 chr2 100821671 100822134 -149865720 - MER6 DNA MER2_type -382 483 1 437 120 76 11 chr2 100822699 100822791 -149865063 + LTR50 LTR ERVL 4 101 -694 897 248 86 8 chr2 100825109 100825343 -149862511 + MIR SINE MIR 8 259 -3 782 370 68 14 chr2 100825429 100825999 -149861855 + L2 LINE L2 1804 2404 -910 354 263 88 6 chr2 100826012 100826172 -149861682 + L2 LINE L2 2590 2762 -552 232 188 42 0 chr2 100829951 100829999 -149857855 - MIR SINE MIR -84 124 75 1832 167 31 55 chr2 100830000 100830023 -149857831 - L1M4 LINE L1 -554 5620 5598 2363 85 0 0 chr2 100830023 100830316 -149857538 - AluSq SINE Alu -20 293 1 1832 167 31 55 chr2 100830316 100830507 -149857347 - L1M4 LINE L1 -576 5598 5404 2259 110 0 0 chr2 100830507 100830806 -149857048 - AluSg SINE Alu -1 309 11 1832 167 31 55 chr2 100830806 100831240 -149856614 - L1M4 LINE L1 -770 5404 4996 358 303 45 45 chr2 100832546 100832701 -149855153 - MIR3 SINE MIR -4 204 50 21 0 0 0 chr2 100834692 100834713 -149853141 + AT_rich Low_complexity Low_complexity 1 21 0 1079 151 23 0 chr2 100834791 100834963 -149852891 + AluSg/x SINE Alu 134 309 -3 817 221 6 17 chr2 100835141 100835313 -149852541 - L1MB5 LINE L1 -8 6166 5997 2402 94 10 0 chr2 100835332 100835641 -149852213 - AluSx SINE Alu 0 312 1 254 252 39 68 chr2 100835747 100835850 -149852004 + L2 LINE L2 3173 3272 0 27 0 0 0 chr2 100836718 100836745 -149851109 + AT_rich Low_complexity Low_complexity 1 27 0 2431 82 0 0 chr2 100836745 100837038 -149850816 - AluY SINE Alu -18 293 1 2308 94 0 0 chr2 100837049 100837336 -149850518 - AluSq SINE Alu -26 287 1 1722 92 9 0 chr2 100838087 100838315 -149849539 - AluSq SINE Alu -16 297 68 331 143 0 0 chr2 100838316 100838365 -149849489 + AluS SINE Alu 13 61 -247 1693 144 115 0 chr2 100838906 100839184 -149848670 + AluSx SINE Alu 1 310 -2 24 0 0 0 chr2 100839478 100839502 -149848352 + AT_rich Low_complexity Low_complexity 1 24 0 378 325 39 57 chr2 100840330 100840553 -149847301 + MIR SINE MIR 38 259 -3 333 346 154 7 chr2 100840673 100840809 -149847045 + L3 LINE CR1 418 573 -1004 * 668 244 46 20 chr2 100840799 100840996 -149846858 - L2 LINE L2 -9 3304 3103 220 403 26 0 chr2 100841151 100841228 -149846626 + L2 LINE L2 3100 3178 -94 * 291 336 130 27 chr2 100841219 100841481 -149846373 + L3 LINE CR1 1128 1416 -161 409 235 162 54 chr2 100843451 100843655 -149844199 - L2 LINE L2 0 3313 3088 558 274 174 0 chr2 100844466 100844656 -149843198 - MIR SINE MIR -36 226 4 235 118 0 0 chr2 100844704 100844738 -149843116 + Alu SINE Alu 91 124 -178 1257 226 74 41 chr2 100845731 100846094 -149841760 + L1M4 LINE L1 4824 5209 -937 665 166 38 6 chr2 100846094 100846251 -149841603 + L1MB8 LINE L1 6017 6178 0 1257 226 74 41 chr2 100846251 100846374 -149841480 + L1M4 LINE L1 5209 5326 -820 702 198 79 4 chr2 100846376 100846603 -149841251 + L1MC3 LINE L1 6855 7098 -687 242 286 10 10 chr2 100846604 100846702 -149841152 + MLT1F1 LTR MaLR 37 134 -433 2495 174 17 0 chr2 100846702 100847179 -149840675 + L1MC3 LINE L1 7200 7684 -101 497 269 26 0 chr2 100847180 100847336 -149840518 + L1MDb LINE L1 896 1055 -5354 253 275 25 0 chr2 100848856 100848936 -149838918 + MLT1H LTR MaLR 80 161 -388 1891 154 0 17 chr2 100849170 100849468 -149838386 + AluJb SINE Alu 1 293 -19 2623 62 11 6 chr2 100849468 100849825 -149838029 + L1PA13 LINE L1 5805 6163 0 278 213 0 0 chr2 100849829 100849890 -149837964 + MLT1H LTR MaLR 489 549 0 528 271 34 40 chr2 100850232 100850409 -149837445 + MER5A DNA MER1_type 14 189 0 29 47 0 0 chr2 100850996 100851039 -149836815 + AT_rich Low_complexity Low_complexity 1 43 0 2111 123 10 20 chr2 100851041 100851179 -149836675 + AluSq SINE Alu 1 139 -174 2292 92 3 3 chr2 100851179 100851485 -149836369 + AluY SINE Alu 1 306 -5 2111 123 10 20 chr2 100851485 100851648 -149836206 + AluSq SINE Alu 139 299 -14 1117 176 34 54 chr2 100851651 100851947 -149835907 - L1MA9 LINE L1 -23 6289 6000 302 239 75 52 chr2 100852256 100852460 -149835394 + MIR SINE MIR 13 262 0 26 30 0 0 chr2 100853856 100853889 -149833965 + AT_rich Low_complexity Low_complexity 1 33 0 378 224 132 40 chr2 100856299 100856451 -149831403 + L3 LINE CR1 654 819 -758 2077 110 0 0 chr2 100956651 100956943 -149730911 - AluSx SINE Alu -20 292 1 1706 77 0 5 chr2 100957721 100957942 -149729912 + AluY SINE Alu 1 220 -91 204 324 44 0 chr2 100957966 100958034 -149729820 + MIR SINE MIR 57 127 -135 218 329 59 63 chr2 100958964 100959186 -149728668 + L2 LINE L2 2737 2957 -357 335 302 248 10 chr2 100959331 100959533 -149728321 + MIR SINE MIR 12 261 -1 815 179 0 0 chr2 100959656 100959790 -149728064 + AluJo SINE Alu 2 135 -177 1968 110 0 57 chr2 100959813 100960130 -149727724 + AluSx SINE Alu 6 304 -8 1484 184 7 14 chr2 100960130 100960423 -149727431 + AluJo SINE Alu 1 292 -20 410 350 75 6 chr2 100960844 100961004 -149726850 + L2 LINE L2 3102 3272 0 340 322 18 26 chr2 100960996 100961164 -149726690 + MIR SINE MIR 7 171 -65 * 589 312 84 57 chr2 100961888 100962048 -149725806 + ERVL LTR ERVL 1649 1803 -3961 2119 97 3 0 chr2 100962048 100962338 -149725516 - AluSx SINE Alu -1 311 21 589 312 84 57 chr2 100962338 100962546 -149725308 + ERVL LTR ERVL 1803 2027 -3737 931 209 147 86 chr2 100962635 100963047 -149724807 + MER66A LTR ERV1 97 474 -4 1118 309 54 22 chr2 100963052 100963499 -149724355 + ERVL LTR ERVL 2036 2496 -3268 2217 90 10 0 chr2 100963741 100964041 -149723813 + AluY SINE Alu 1 303 -8 339 274 66 11 chr2 100964380 100964586 -149723268 + LTR33 LTR ERVL 64 315 -206 620 194 93 89 chr2 100965213 100965402 -149722452 - MIR SINE MIR -1 261 69 1856 128 17 0 chr2 100965402 100965700 -149722154 + AluSx SINE Alu 1 303 -9 620 194 93 89 chr2 100965700 100965747 -149722107 - MIR SINE MIR -193 69 24 201 152 0 0 chr2 100965749 100965782 -149722072 + CT-rich Low_complexity Low_complexity 2 34 0 204 40 0 0 chr2 100965782 100965807 -149722047 + (CA)n Simple_repeat Simple_repeat 2 26 0 1215 189 9 0 chr2 100966107 100966329 -149721525 + AluJo SINE Alu 1 224 -88 1585 166 3 18 chr2 100967196 100967479 -149720375 + AluJb SINE Alu 1 279 -33 737 22 0 11 chr2 100967485 100967577 -149720277 + (GAAA)n Simple_repeat Simple_repeat 2 92 0 862 132 0 0 chr2 100967636 100967765 -149720089 + AluSg/x SINE Alu 171 299 -13 449 171 12 0 chr2 100968088 100968170 -149719684 - MLT2B1 LTR ERVL -307 213 131 394 359 38 22 chr2 100968717 100968901 -149718953 - MIR SINE MIR -62 200 14 209 250 73 29 chr2 100970203 100970271 -149717583 + MIR3 SINE MIR 86 156 -52 575 186 124 0 chr2 100970599 100970728 -149717126 + LTR16A LTR ERVL 234 378 -72 29 47 0 0 chr2 100971032 100971075 -149716779 + AT_rich Low_complexity Low_complexity 1 43 0 930 149 0 0 chr2 100971095 100971236 -149716618 - AluSq/x SINE Alu -171 141 1 496 268 16 0 chr2 100971924 100972051 -149715803 + MIR SINE MIR 64 192 -70 490 341 17 6 chr2 100972362 100972538 -149715316 - MER5B DNA MER1_type 0 178 1 299 176 135 0 chr2 100972842 100972916 -149714938 - MER69 DNA AcHobo -7 2519 2436 264 292 42 0 chr2 100972987 100973059 -149714795 - MIR SINE MIR -152 110 36 2213 104 3 0 chr2 100973737 100974046 -149713808 - AluSp SINE Alu -3 310 1 348 281 55 34 chr2 100975508 100975654 -149712200 + L1MB5 LINE L1 6026 6174 0 568 281 59 25 chr2 100976442 100976645 -149711209 - MIR SINE MIR -18 244 35 220 341 11 11 chr2 100976699 100976787 -149711067 - L2 LINE L2 -32 3240 3153 2744 96 41 19 chr2 100976938 100977357 -149710497 + MSTA LTR MaLR 1 428 0 315 261 35 52 chr2 100977440 100977555 -149710299 + MIR SINE MIR 111 223 -39 1973 176 6 0 chr2 100978981 100979317 -149708537 + MER74A LTR ERVL 221 558 0 262 284 180 48 chr2 100979461 100979817 -149708037 - L2 LINE L2 -557 2757 2355 288 238 114 19 chr2 100979876 100979981 -149707873 - L2 LINE L2 -14 3258 3144 2204 108 0 9 chr2 100980424 100980739 -149707115 - AluSx SINE Alu 0 312 1 472 265 23 23 chr2 100982209 100982341 -149705513 - MIR3 SINE MIR -36 172 41 1812 158 0 3 chr2 100982826 100983123 -149704731 + AluJb SINE Alu 5 300 -12 262 317 27 25 chr2 100984348 100984518 -149703336 + MIR SINE MIR 17 183 -58 243 353 15 8 chr2 100985046 100985179 -149702675 + MIR3 SINE MIR 37 170 -38 1573 174 9 29 chr2 100985486 100985802 -149702052 + L1MC4 LINE L1 6769 7078 -964 766 164 211 88 chr2 100986366 100986684 -149701170 + L1MC4 LINE L1 7098 7454 -588 2161 206 58 55 chr2 100986708 100986753 -149701101 + MLT1E LTR MaLR 1 44 -549 1769 131 62 0 chr2 100986753 100987027 -149700827 - AluSx SINE Alu -21 291 1 2161 206 58 55 chr2 100987027 100987564 -149700290 + MLT1E LTR MaLR 44 585 -8 611 213 82 74 chr2 100987577 100987821 -149700033 + L1MC4 LINE L1 7797 8042 0 2043 131 0 0 chr2 100987821 100988119 -149699735 + AluSx SINE Alu 15 312 0 6607 134 7 12 chr2 100988769 100989991 -149697863 + L1MA4 LINE L1 5072 6289 -11 1027 218 97 94 chr2 100991719 100991791 -149696063 + L1ME LINE L1 2416 2486 -3729 2778 9 3 0 chr2 100991791 100992107 -149695747 + AluYb8 SINE Alu 1 317 -1 1027 218 97 94 chr2 100992107 100992631 -149695223 + L1ME LINE L1 2486 3014 -3201 313 314 12 0 chr2 100992636 100992722 -149695132 + L1ME1 LINE L1 142 228 -5977 1246 267 110 4 chr2 100992771 100993224 -149694630 + L1ME1 LINE L1 1408 1908 -4488 429 233 22 11 chr2 100993226 100993316 -149694538 - Tigger7 DNA MER2_type 0 2487 2397 3294 163 10 0 chr2 100993318 100993827 -149694027 - Tigger7 DNA MER2_type -214 519 6 3338 224 53 17 chr2 100993832 100995238 -149692616 + L1ME1 LINE L1 1907 3310 -2905 2312 234 76 29 chr2 100995397 100995471 -149692383 - L1MD2 LINE L1 -133 6226 6157 203 0 37 0 chr2 100995471 100995498 -149692356 + (TG)n Simple_repeat Simple_repeat 2 29 0 2312 234 76 29 chr2 100995498 100996044 -149691810 - L1MD2 LINE L1 -202 6157 5577 3256 219 38 23 chr2 100996044 100997208 -149690646 + L1ME1 LINE L1 5051 6230 -5 1264 257 45 67 chr2 100997233 100997832 -149690022 + L1ME LINE L1 3572 4157 -2058 1055 164 20 35 chr2 100997962 100998163 -149689691 - L1M3 LINE L1 -526 5645 5448 733 280 123 57 chr2 100998156 100998871 -149688983 - L1ME4a LINE L1 -13 6108 5347 * 5885 156 9 2 chr2 100999789 101000146 -149687708 - L1PB1 LINE L1 0 6151 5798 303 49 0 0 chr2 101000146 101000187 -149687667 + (TA)n Simple_repeat Simple_repeat 2 42 0 5885 156 9 2 chr2 101000187 101001666 -149686188 - L1PB1 LINE L1 -353 5798 4303 354 316 37 19 chr2 101002027 101002242 -149685612 - L1MC4a LINE L1 -1878 5930 5712 26 23 0 23 chr2 101002242 101002263 -149685591 + AT_rich Low_complexity Low_complexity 1 21 -22 2113 62 3 106 chr2 101002263 101002584 -149685270 - AluSp SINE Alu -25 288 1 26 23 0 23 chr2 101002584 101002606 -149685248 + AT_rich Low_complexity Low_complexity 21 43 0 2725 32 0 0 chr2 101002617 101002926 -149684928 - AluY SINE Alu -2 309 1 213 275 0 43 chr2 101003714 101003783 -149684071 - L2 LINE L2 0 3313 3248 2096 115 0 20 chr2 101004165 101004461 -149683393 + AluSx SINE Alu 1 290 -22 430 137 54 0 chr2 101004901 101005135 -149682719 + (TA)n Simple_repeat Simple_repeat 1 246 0 275 211 46 28 chr2 101005917 101005951 -149681903 + L1ME4a LINE L1 6008 6040 -81 2350 96 3 3 chr2 101005951 101006264 -149681590 - AluSq SINE Alu 0 313 1 275 211 46 28 chr2 101006264 101006338 -149681516 + L1ME4a LINE L1 6040 6118 -3 1570 199 7 0 chr2 101006517 101006813 -149681041 + AluJo SINE Alu 1 298 -14 648 279 111 76 chr2 101009165 101009748 -149678106 + L2 LINE L2 2704 3313 0 333 156 16 47 chr2 101012752 101012816 -149675038 + Tigger2 DNA MER2_type 1 62 -2656 2648 136 18 47 chr2 101012827 101013277 -149674577 + Tigger2 DNA MER2_type 2280 2716 -2 246 298 53 44 chr2 101013277 101013391 -149674463 + MIR SINE MIR 37 151 -111 457 272 24 8 chr2 101013488 101013613 -149674241 - MIR SINE MIR -124 138 12 186 128 0 0 chr2 101013737 101013776 -149674078 + (TA)n Simple_repeat Simple_repeat 1 39 0 839 263 107 48 chr2 101013849 101014328 -149673526 - L1ME4a LINE L1 -205 5916 5410 22 35 0 0 chr2 101014665 101014694 -149673160 + AT_rich Low_complexity Low_complexity 1 29 0 225 0 0 0 chr2 101015018 101015043 -149672811 + (T)n Simple_repeat Simple_repeat 1 25 0 280 287 39 70 chr2 101015297 101015426 -149672428 - MIR SINE MIR -56 206 82 240 321 37 0 chr2 101015445 101015526 -149672328 - L2 LINE L2 -1 3271 3188 220 206 44 44 chr2 101015562 101015630 -149672224 - MIR3 SINE MIR -136 72 5 21 36 0 0 chr2 101016792 101016820 -149671034 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 101017309 101017339 -149670515 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr2 101017887 101017912 -149669942 + AT_rich Low_complexity Low_complexity 1 25 0 246 299 28 56 chr2 101017913 101018020 -149669834 - MLT1I LTR MaLR -74 335 232 430 231 75 8 chr2 101018125 101018259 -149669595 + L1M4 LINE L1 4620 4762 -1384 479 319 51 4 chr2 101018342 101018577 -149669277 + L1M4 LINE L1 4743 4988 -1158 510 186 47 186 chr2 101018684 101018736 -149669118 - L1ME3A LINE L1 -110 6060 6002 2160 101 0 17 chr2 101018736 101019033 -149668821 - AluSc SINE Alu -17 292 1 510 186 47 186 chr2 101019033 101019255 -149668599 - L1ME3A LINE L1 -168 6002 5824 * 7607 179 88 17 chr2 101019254 101020887 -149666967 - L1MC3 LINE L1 -641 7144 5396 1098 193 49 5 chr2 101021036 101021073 -149666781 - L1MB2 LINE L1 -7 6164 6130 321 26 0 0 chr2 101021073 101021111 -149666743 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1645 180 7 7 chr2 101021111 101021395 -149666459 - AluJb SINE Alu -28 284 1 1098 193 49 5 chr2 101021395 101021579 -149666275 - L1MB2 LINE L1 -40 6131 5932 556 207 26 0 chr2 101021696 101021812 -149666042 + LTR33 LTR ERVL 403 521 0 356 88 18 0 chr2 101022782 101022839 -149665015 + (TG)n Simple_repeat Simple_repeat 2 59 0 1986 117 0 47 chr2 101022884 101023184 -149664670 + AluSq SINE Alu 21 306 -7 674 250 36 31 chr2 101023562 101023758 -149664096 - MIR SINE MIR -64 198 2 412 214 78 0 chr2 101023909 101024012 -149663842 + MER81 DNA DNA 2 112 -2 23 54 0 0 chr2 101025355 101025392 -149662462 + AT_rich Low_complexity Low_complexity 1 37 0 236 75 0 25 chr2 101025889 101025929 -149661925 + (GA)n Simple_repeat Simple_repeat 1 39 0 820 269 140 15 chr2 101026863 101027205 -149660649 - L2 LINE L2 -10 3303 2919 225 180 0 0 chr2 101027626 101027676 -149660178 + CT-rich Low_complexity Low_complexity 1 50 0 2128 125 0 7 chr2 101028393 101028696 -149659158 - AluSx SINE Alu -11 301 1 722 268 195 21 chr2 101028727 101029107 -149658747 - MLT1J2 LTR MaLR 0 450 5 305 213 187 0 chr2 101029174 101029249 -149658605 - MIR3 SINE MIR -31 177 89 554 225 41 0 chr2 101029532 101029701 -149658153 - HsTC2 DNA Tc2 0 1898 1723 3569 167 33 19 chr2 101029714 101029744 -149658110 - L1MB3 LINE L1 -22 6161 6133 1588 196 3 20 chr2 101029744 101030040 -149657814 - AluJo SINE Alu -21 291 1 3569 167 33 19 chr2 101030040 101030697 -149657157 - L1MB3 LINE L1 -50 6133 5464 1395 265 45 40 chr2 101030697 101031143 -149656711 - HsTC2 DNA Tc2 -157 1741 1294 1374 275 105 12 chr2 101031164 101031427 -149656427 + L1ME3A LINE L1 4410 4647 -1523 1563 153 88 0 chr2 101031427 101031710 -149656144 - AluJb SINE Alu 0 306 1 1374 275 105 12 chr2 101031710 101032672 -149655182 + L1ME3A LINE L1 4647 5809 -361 282 228 18 0 chr2 101032673 101032730 -149655124 - MER58 DNA MER1_type -1 2419 2362 332 235 206 0 chr2 101032752 101032854 -149655000 - MER58 DNA MER1_type -2297 123 1 991 267 112 6 chr2 101032862 101033184 -149654670 + L1ME3A LINE L1 5810 6165 -5 251 214 18 0 chr2 101033436 101033492 -149654362 + GA-rich Low_complexity Low_complexity 1 57 0 2323 102 0 0 chr2 101033932 101034285 -149653569 + AluSx SINE Alu 10 362 0 8089 29 0 5 chr2 101035597 101036560 -149651294 - L1PA4 LINE L1 0 6155 5192 43000 49 2 1 chr2 101036581 101041785 -149646069 - L1PA4 LINE L1 -925 5221 12 1265 259 94 39 chr2 101042646 101043095 -149644759 - LTR33 LTR ERVL 0 521 42 2304 106 7 0 chr2 101043095 101043398 -149644456 + AluSx SINE Alu 1 305 -7 1265 259 94 39 chr2 101043398 101043435 -149644419 - LTR33 LTR ERVL -479 42 8 2391 69 0 0 chr2 101043881 101044189 -149643665 + AluY SINE Alu 1 283 -28 1696 220 92 47 chr2 101044824 101045293 -149642561 - LTR16C LTR ERVL -1 490 1 1133 139 0 0 chr2 101045455 101045613 -149642241 + AluSx SINE Alu 1 158 -154 180 0 0 0 chr2 101045642 101045662 -149642192 + (CAA)n Simple_repeat Simple_repeat 2 21 0 248 320 10 0 chr2 101046047 101046144 -149641710 + L1ME LINE L1 155 252 -5953 207 0 0 0 chr2 101046290 101046313 -149641541 + (A)n Simple_repeat Simple_repeat 1 23 0 536 318 76 50 chr2 101046852 101046989 -149640865 + L1ME LINE L1 828 960 -5436 2270 117 3 0 chr2 101046989 101047296 -149640558 - AluSx SINE Alu -4 308 1 536 318 76 50 chr2 101047296 101048088 -149639766 + L1ME LINE L1 960 1782 -4614 2248 118 0 0 chr2 101048512 101048816 -149639038 + AluSp SINE Alu 1 304 -9 225 0 0 0 chr2 101048837 101048862 -149638992 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 352 291 0 82 chr2 101048864 101049070 -149638784 + L1ME LINE L1 2280 2468 -3747 666 240 41 61 chr2 101049364 101049646 -149638208 + LTR1 LTR ERV1 3 425 -550 215 294 88 15 chr2 101049794 101049862 -149637992 + L2 LINE L2 3200 3272 0 248 250 164 31 chr2 101049893 101050021 -149637833 - L2 LINE L2 -248 3024 2880 2683 7 0 0 chr2 101050087 101050404 -149637450 + AluYb8 SINE Alu 1 317 0 526 223 9 0 chr2 101051084 101051196 -149636658 - MER103 DNA DNA -51 115 3 199 276 211 0 chr2 101051830 101051906 -149635948 + MIR SINE MIR 52 143 -119 648 289 126 38 chr2 101052112 101052971 -149634883 + HAL1 LINE L1 810 1883 -624 331 261 43 26 chr2 101053595 101053710 -149634144 + HAL1 LINE L1 2245 2361 -146 230 252 126 39 chr2 101053733 101053836 -149634018 + L2 LINE L2 3160 3271 -1 306 333 24 18 chr2 101055621 101055775 -149632079 - MIR3 SINE MIR -52 156 47 3795 105 22 2 chr2 101056102 101056645 -149631209 + MER41A LTR ERV1 1 554 0 505 252 151 14 chr2 101056958 101057176 -149630678 + L3 LINE CR1 1301 1548 -29 315 0 0 0 chr2 101057679 101057714 -149630140 + (TG)n Simple_repeat Simple_repeat 2 36 0 614 236 47 26 chr2 101057984 101058175 -149629679 - MIR SINE MIR 0 262 68 293 310 124 0 chr2 101058457 101058586 -149629268 + Charlie2 DNA MER1_type 6 150 -2632 247 300 340 10 chr2 101058741 101058841 -149629013 - MER91A DNA MER1_type -21 175 43 265 283 85 9 chr2 101058843 101058949 -149628905 + Charlie2 DNA MER1_type 221 334 -2528 2236 101 0 10 chr2 101059740 101060038 -149627816 - AluSx SINE Alu 0 312 18 247 329 0 0 chr2 101060100 101060179 -149627675 - MIR SINE MIR -2 260 182 1434 132 50 64 chr2 101060404 101060685 -149627169 + L1MA8 LINE L1 6011 6287 -4 509 179 26 9 chr2 101060956 101061147 -149626707 + MER33 DNA MER1_type 4 274 -89 978 178 18 6 chr2 101061224 101061387 -149626467 - FRAM SINE Alu -1 165 1 1076 156 12 0 chr2 101061416 101061576 -149626278 + FRAM SINE Alu 2 163 -3 1046 189 24 0 chr2 101061731 101061900 -149625954 - FAM SINE Alu -2 173 1 2377 82 0 3 chr2 101061946 101062249 -149625605 + AluY SINE Alu 1 302 -9 413 273 14 20 chr2 101062285 101062442 -149625412 - L1P1 LINE L1 -297 5824 5684 241 316 60 17 chr2 101062465 101062582 -149625272 - L1ME LINE L1 -516 5605 5484 757 254 280 13 chr2 101063058 101063498 -149624356 - L2 LINE L2 -1 3312 2759 572 238 74 81 chr2 101063499 101063797 -149624057 + MLT1G1 LTR MaLR 2 297 -298 354 257 49 18 chr2 101063880 101064009 -149623845 + MLT1H1 LTR MaLR 449 554 -1 1770 282 91 10 chr2 101064010 101064782 -149623072 - L2 LINE L2 -551 2763 1930 391 305 139 43 chr2 101064862 101065308 -149622546 - L1ME LINE L1 -1307 4839 4351 246 32 0 0 chr2 101065830 101065861 -149621993 + (CA)n Simple_repeat Simple_repeat 2 32 0 2248 103 0 3 chr2 101066953 101067253 -149620601 + AluSx SINE Alu 1 299 -13 274 287 23 0 chr2 101068157 101068244 -149619610 + L1MC/D LINE L1 5697 5785 -2023 256 324 22 44 chr2 101068410 101068546 -149619308 - MIR SINE MIR -51 211 79 203 392 40 0 chr2 101068583 101068708 -149619146 + MIR3 SINE MIR 7 136 -72 237 65 0 0 chr2 101069270 101069301 -149618553 + (ATG)n Simple_repeat Simple_repeat 2 32 0 623 244 109 35 chr2 101069309 101069510 -149618344 - MIR SINE MIR -8 254 39 206 200 0 0 chr2 101070062 101070115 -149617739 + (CA)n Simple_repeat Simple_repeat 1 53 0 210 150 0 0 chr2 101070148 101070188 -149617666 + (CA)n Simple_repeat Simple_repeat 1 40 0 252 86 0 0 chr2 101070502 101070537 -149617317 + (CA)n Simple_repeat Simple_repeat 1 35 0 216 313 11 34 chr2 101071895 101072071 -149615783 + (CACCC)n Simple_repeat Simple_repeat 3 174 0 202 287 160 11 chr2 101072442 101072536 -149615318 + MIR3 SINE MIR 49 156 -52 27 0 0 0 chr2 101072682 101072709 -149615145 + AT_rich Low_complexity Low_complexity 1 27 0 443 262 9 0 chr2 101072969 101073076 -149614778 - MER3 DNA MER1_type 0 209 102 958 283 202 19 chr2 101074982 101075710 -149612144 + L1MC4 LINE L1 7176 8036 -6 2003 109 53 0 chr2 101075877 101076143 -149611711 + AluSg SINE Alu 1 280 -30 621 162 0 0 chr2 101076252 101076351 -149611503 - AluJ/FRAM SINE Alu 0 312 214 289 357 0 18 chr2 101079405 101079517 -149608337 + MIR SINE MIR 119 228 -34 390 296 28 35 chr2 101080063 101080205 -149607649 + MIR3 SINE MIR 17 157 -51 1292 227 129 52 chr2 101080205 101080685 -149607169 + MLT2B1 LTR ERVL 4 520 0 430 267 130 94 chr2 101080892 101081360 -149606494 - L3 LINE CR1 -510 1067 583 395 217 59 182 chr2 101081361 101081564 -149606290 - MER5B DNA MER1_type 0 178 1 1141 169 10 20 chr2 101081576 101081777 -149606077 - MER58A DNA MER1_type 0 224 26 761 196 51 25 chr2 101081836 101081994 -149605860 + FRAM SINE Alu 1 162 -4 387 0 0 0 chr2 101082009 101082052 -149605802 + (CA)n Simple_repeat Simple_repeat 1 43 0 866 298 105 23 chr2 101082064 101082503 -149605351 - L3 LINE CR1 -1042 535 61 327 235 39 10 chr2 101082755 101082857 -149604997 - MER94 DNA DNA -3 131 27 2266 99 13 0 chr2 101082988 101083290 -149604564 + AluSx SINE Alu 1 306 -6 299 267 67 11 chr2 101083290 101083380 -149604474 + MIR SINE MIR 31 125 -137 360 227 76 50 chr2 101084158 101084277 -149603577 - MIR SINE MIR -79 129 7 22 70 0 0 chr2 101084353 101084396 -149603458 + AT_rich Low_complexity Low_complexity 1 43 0 355 250 21 71 chr2 101084455 101084595 -149603259 - MER68 LTR ERV1 -243 319 187 1577 163 116 39 chr2 101084596 101084916 -149602938 + L1MB8 LINE L1 4957 5251 -923 2349 113 0 0 chr2 101084916 101085225 -149602629 + AluSq SINE Alu 1 309 -4 1577 163 116 39 chr2 101085225 101085454 -149602400 + L1MB8 LINE L1 5251 5551 -623 777 129 32 0 chr2 101085460 101085584 -149602270 + L1MB8 LINE L1 6041 6168 -10 607 214 173 6 chr2 101086210 101086383 -149601471 - MIR SINE MIR -54 208 7 39 0 0 0 chr2 101086515 101086554 -149601300 + AT_rich Low_complexity Low_complexity 1 39 0 1693 224 85 55 chr2 101086558 101087135 -149600719 - L1MD3 LINE L1 -3 7992 7399 244 240 27 27 chr2 101087143 101087218 -149600636 - MLT1F1 LTR MaLR -456 111 37 1030 262 47 86 chr2 101088610 101088914 -149598940 + L1MEd LINE L1 586 900 -5219 2406 82 0 3 chr2 101088914 101089219 -149598635 + AluSq SINE Alu 1 304 -9 854 129 0 29 chr2 101089228 101089367 -149598487 + L1MB2 LINE L1 6030 6164 -7 1030 262 47 86 chr2 101089367 101089719 -149598135 + L1MEd LINE L1 908 1226 -4893 2219 88 3 0 chr2 101089750 101090076 -149597778 + AluSp SINE Alu 1 327 0 271 279 147 52 chr2 101093655 101093791 -149594063 - MIR SINE MIR -91 171 23 643 321 71 26 chr2 101094425 101094777 -149593077 + L3 LINE CR1 1207 1574 -3 1135 119 6 6 chr2 101094898 101095074 -149592780 - L1PA13 LINE L1 -5 6158 5983 317 103 23 0 chr2 101095077 101095130 -149592724 + L1PA12 LINE L1 5816 5873 -299 198 222 22 0 chr2 101096712 101096757 -149591097 + L2 LINE L2 3263 3308 -5 22 0 0 0 chr2 101096858 101096880 -149590974 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 101097213 101097234 -149590620 + AT_rich Low_complexity Low_complexity 1 21 0 2156 103 48 30 chr2 101098064 101098395 -149589459 + MER1B DNA MER1_type 1 337 0 2115 201 32 22 chr2 101099039 101099501 -149588353 + MLT1C LTR MaLR 1 467 0 2210 183 77 35 chr2 101102910 101103028 -149584826 + MLT1D LTR MaLR 1 113 -392 1899 151 14 0 chr2 101103028 101103320 -149584534 + AluSx SINE Alu 1 296 -16 2210 183 77 35 chr2 101103320 101103681 -149584173 + MLT1D LTR MaLR 113 500 -5 21 0 0 0 chr2 101104433 101104454 -149583400 + AT_rich Low_complexity Low_complexity 1 21 0 218 211 53 0 chr2 101104459 101104516 -149583338 - MIR3 SINE MIR -7 201 142 1478 157 95 40 chr2 101104751 101105001 -149582853 + MER2 DNA MER2_type 2 276 -68 2486 78 0 13 chr2 101105001 101105307 -149582547 - AluY SINE Alu -9 302 1 1478 157 95 40 chr2 101105307 101105381 -149582473 + MER2 DNA MER2_type 276 344 0 626 228 0 38 chr2 101106935 101107093 -149580761 + L1PB4 LINE L1 6005 6156 0 296 262 74 41 chr2 101107539 101107661 -149580193 - MIR SINE MIR -13 249 124 2155 107 3 33 chr2 101108619 101108947 -149578907 + AluSp SINE Alu 1 319 0 210 284 0 15 chr2 101109617 101109684 -149578170 + GA-rich Low_complexity Low_complexity 4 69 0 207 304 0 0 chr2 101110002 101110058 -149577796 - L2 LINE L2 -2 3270 3215 522 227 141 11 chr2 101110112 101110297 -149577557 - MIR SINE MIR -42 220 12 443 160 0 53 chr2 101110395 101110489 -149577365 + L1MA4A LINE L1 6210 6298 -5 287 180 20 80 chr2 101111485 101111585 -149576269 + MIR3 SINE MIR 115 208 0 212 274 85 19 chr2 101111607 101111713 -149576141 + L2 LINE L2 3181 3293 -20 2254 123 0 0 chr2 101112061 101112369 -149575485 + AluSc SINE Alu 1 308 -1 274 254 17 51 chr2 101112675 101112793 -149575061 - MIR SINE MIR -56 206 93 1902 219 18 29 chr2 101113504 101114174 -149573680 + L1M4 LINE L1 3678 4320 -1826 426 282 98 6 chr2 101115496 101115659 -149572195 - MIR SINE MIR -65 197 20 198 103 0 0 chr2 101116476 101116505 -149571349 + (CATA)n Simple_repeat Simple_repeat 3 31 0 2070 105 0 43 chr2 101116506 101116810 -149571044 - AluSx SINE Alu -21 291 1 782 214 78 19 chr2 101116882 101117088 -149570766 + MIR SINE MIR 1 218 -44 804 216 20 78 chr2 101117837 101117941 -149569913 + MER45 DNA AcHobo 1 89 -951 2396 73 0 13 chr2 101117941 101118244 -149569610 - AluY SINE Alu -12 299 1 804 216 20 78 chr2 101118244 101118343 -149569511 + MER45 DNA AcHobo 89 192 -848 2039 111 7 0 chr2 101118373 101118643 -149569211 - AluSx SINE Alu -18 294 23 520 178 0 37 chr2 101118673 101118780 -149569074 + MER45 DNA AcHobo 1479 1581 0 409 105 40 0 chr2 101118801 101118877 -149568977 + A-rich Low_complexity Low_complexity 2 80 0 260 248 150 26 chr2 101119138 101119251 -149568603 + L2 LINE L2 2667 2793 -521 556 314 99 22 chr2 101119283 101119688 -149568166 - MLT1L LTR MaLR -33 582 147 288 0 0 0 chr2 101120044 101120076 -149567778 + (CA)n Simple_repeat Simple_repeat 2 33 0 272 281 180 14 chr2 101120144 101120283 -149567571 + Charlie8 DNA MER1_type 27 188 -2229 5055 126 26 12 chr2 101120301 101121073 -149566781 - LTR39 LTR ERV1 0 783 1 481 245 95 65 chr2 101121168 101121368 -149566486 - LTR33 LTR ERVL -301 220 15 682 152 34 12 chr2 101122344 101122476 -149565378 + L1MB1 LINE L1 6041 6169 -20 256 319 121 19 chr2 101122764 101123078 -149564776 + L2 LINE L2 2063 2408 -906 419 297 73 16 chr2 101123486 101123678 -149564176 + L2 LINE L2 2877 3079 -193 1807 154 26 0 chr2 101123948 101124221 -149563633 - AluJb SINE Alu -16 296 17 3524 133 14 2 chr2 101124952 101125472 -149562382 - MER1A DNA MER1_type -1 526 1 301 261 297 0 chr2 101127412 101127550 -149560304 + MER5A DNA MER1_type 10 188 -1 228 341 0 12 chr2 101128165 101128247 -149559607 - L3 LINE CR1 -6 1571 1491 258 266 93 43 chr2 101128306 101128445 -149559409 - L3 LINE CR1 -241 1336 1191 23 0 0 0 chr2 101129208 101129231 -149558623 + AT_rich Low_complexity Low_complexity 1 23 0 661 237 129 35 chr2 101130580 101130812 -149557042 - MER112 DNA MER1_type -6 254 1 208 341 0 34 chr2 101131497 101131585 -149556269 + L2 LINE L2 3187 3271 -1 682 286 92 5 chr2 101132573 101132790 -149555064 + MIR SINE MIR 21 256 -6 240 314 78 17 chr2 101132798 101132980 -149554874 + MIR SINE MIR 67 259 -3 30 45 0 0 chr2 101135274 101135318 -149552536 + GC_rich Low_complexity Low_complexity 1 44 0 198 103 0 0 chr2 101135409 101135438 -149552416 + (CCG)n Simple_repeat Simple_repeat 1 29 0 221 146 0 55 chr2 101135660 101135715 -149552139 + (CCCCCG)n Simple_repeat Simple_repeat 6 57 0 261 83 0 0 chr2 101139376 101139412 -149548442 + (T)n Simple_repeat Simple_repeat 1 36 0 300 288 121 8 chr2 101140170 101140302 -149547552 - MIR SINE MIR -26 236 90 242 309 109 0 chr2 101140512 101140622 -149547232 + MIR3 SINE MIR 64 185 -23 467 273 123 72 chr2 101141223 101141693 -149546161 + MLT1J LTR MaLR 1 596 -19 1919 162 10 0 chr2 101142359 101142661 -149545193 + AluJb SINE Alu 1 305 -7 237 259 17 0 chr2 101143142 101143200 -149544654 - L2 LINE L2 0 3272 3214 182 310 69 35 chr2 101143292 101143379 -149544475 - L2 LINE L2 -8 3264 3175 797 211 13 0 chr2 101144182 101144334 -149543520 - MER45A DNA AcHobo -24 154 1 2296 100 0 0 chr2 101144341 101144630 -149543224 - AluSx SINE Alu -23 289 1 491 293 29 73 chr2 101145032 101145213 -149542641 - L1MEd LINE L1 -3290 2839 2676 1821 145 7 39 chr2 101145213 101145523 -149542331 + AluSx SINE Alu 1 300 -12 491 293 29 73 chr2 101145523 101145655 -149542199 - L1MEd LINE L1 -3453 2676 2540 293 266 27 45 chr2 101145709 101145846 -149542008 - L1MEc LINE L1 -4550 1993 1852 753 300 21 33 chr2 101145895 101146667 -149541187 - L1MEd LINE L1 -3610 2519 1794 651 287 93 27 chr2 101146825 101147784 -149540070 - L1MEd LINE L1 -4575 1554 537 384 327 82 18 chr2 101148262 101148482 -149539372 + MIR SINE MIR 16 249 -13 2052 101 38 3 chr2 101148761 101149048 -149538806 - AluSx SINE Alu -15 297 1 504 273 80 6 chr2 101149531 101149707 -149538147 - MIR SINE MIR 0 262 74 1347 151 107 33 chr2 101150614 101150885 -149536969 - AluJo SINE Alu -21 291 1 780 274 34 0 chr2 101201072 101201309 -149486545 - L1M4 LINE L1 -3297 2849 2605 248 192 41 14 chr2 101203602 101203675 -149484179 + (TA)n Simple_repeat Simple_repeat 2 76 0 1967 177 42 69 chr2 101203885 101204365 -149483489 - MLT1C LTR MaLR 0 467 1 34 24 0 0 chr2 101204370 101204411 -149483443 + AT_rich Low_complexity Low_complexity 1 41 0 2670 245 47 10 chr2 101204524 101205387 -149482467 + L1M4 LINE L1 3217 4120 -2026 416 186 31 21 chr2 101205387 101205484 -149482370 + L1MB8 LINE L1 5829 5926 -252 364 222 11 0 chr2 101205633 101205723 -149482131 - L1MC5 LINE L1 -392 7569 7479 795 176 65 0 chr2 101205735 101205888 -149481966 - FRAM SINE Alu -6 170 8 1794 202 78 70 chr2 101205962 101206562 -149481292 - L1MC5 LINE L1 -724 7237 6633 21 36 0 0 chr2 101206607 101206635 -149481219 + AT_rich Low_complexity Low_complexity 1 28 0 31 26 0 0 chr2 101206718 101206756 -149481098 + AT_rich Low_complexity Low_complexity 1 38 0 189 0 0 0 chr2 101206793 101206814 -149481040 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1298 185 0 0 chr2 101207696 101207896 -149479958 + AluJo SINE Alu 83 282 -30 2492 60 3 10 chr2 101208749 101209051 -149478803 + AluY SINE Alu 1 300 -11 2129 121 0 23 chr2 101209423 101209730 -149478124 - AluSg SINE Alu -10 300 1 190 295 0 0 chr2 101210361 101210422 -149477432 + L2 LINE L2 3250 3310 -3 2181 116 17 0 chr2 101211026 101211328 -149476526 - AluSx SINE Alu -5 307 1 191 347 0 0 chr2 101211623 101211672 -149476182 - L2 LINE L2 -78 3194 3146 198 248 72 96 chr2 101211899 101212024 -149475830 - L2 LINE L2 -495 2819 2698 356 257 40 68 chr2 101212355 101212503 -149475351 + MER5B DNA MER1_type 35 178 0 230 210 48 32 chr2 101212520 101212582 -149475272 - MER5A DNA MER1_type -6 183 121 2035 98 0 4 chr2 101213942 101214208 -149473646 - AluSq SINE Alu -48 265 1 1518 201 17 3 chr2 101214212 101214506 -149473348 - AluJo SINE Alu -14 298 1 202 273 20 91 chr2 101215649 101215748 -149472106 - MIR SINE MIR -94 114 23 3192 161 38 30 chr2 101216453 101217057 -149470797 + LTR1 LTR ERV1 1 609 -176 228 269 0 39 chr2 101217181 101217259 -149470595 + L2 LINE L2 3199 3273 -40 840 333 23 57 chr2 101217280 101217743 -149470111 + L2 LINE L2 2221 2653 -661 2306 98 3 25 chr2 101217743 101218061 -149469793 - AluSp SINE Alu -2 311 1 840 333 23 57 chr2 101218061 101218300 -149469554 + L2 LINE L2 2653 2899 -415 2847 206 154 111 chr2 101218466 101218790 -149469064 - MLT1A2-int LTR MaLR -155 1216 907 815 88 0 0 chr2 101218790 101218892 -149468962 - AluJ/FLAM SINE Alu -210 102 1 2847 206 154 111 chr2 101218892 101219479 -149468375 - MLT1A2-int LTR MaLR -464 907 146 2370 101 3 0 chr2 101219479 101219785 -149468069 - AluSx SINE Alu -5 307 1 2847 206 154 111 chr2 101219785 101219930 -149467924 - MLT1A2-int LTR MaLR -1225 146 9 1807 208 33 16 chr2 101219936 101220302 -149467552 - MLT1A2 LTR MaLR -2 372 1 21 0 0 0 chr2 101223047 101223068 -149464786 + AT_rich Low_complexity Low_complexity 1 21 0 2412 222 46 18 chr2 101223614 101224399 -149463455 + L1MEc LINE L1 1864 2634 -3581 2469 95 9 3 chr2 101224399 101224745 -149463109 + L1PA10 LINE L1 5810 6157 -11 2412 222 46 18 chr2 101224745 101224953 -149462901 + L1MEc LINE L1 2634 2835 -3380 3014 234 69 20 chr2 101224976 101225738 -149462116 + L1ME1 LINE L1 5131 5939 -227 2061 128 17 7 chr2 101225738 101226035 -149461819 + AluJb SINE Alu 1 300 -12 3014 234 69 20 chr2 101226035 101226226 -149461628 + L1ME1 LINE L1 5939 6119 -47 908 151 0 0 chr2 101226241 101226367 -149461487 - FLAM_C SINE Alu -17 126 1 250 188 0 31 chr2 101226367 101226431 -149461423 + L1MA10 LINE L1 6269 6330 -4 234 324 6 35 chr2 101226475 101226645 -149461209 + L1MEc LINE L1 3032 3196 -3019 534 319 12 0 chr2 101226750 101227007 -149460847 + L1M4 LINE L1 2112 2371 -3775 2314 56 26 10 chr2 101227189 101227494 -149460360 - AluY SINE Alu -1 310 1 3372 99 2 9 chr2 101227608 101228071 -149459783 + MER9 LTR ERVK 52 511 0 220 263 0 0 chr2 101228558 101228615 -149459239 + MER5C DNA MER1_type 68 124 -200 39 60 0 0 chr2 101228788 101228855 -149458999 + AT_rich Low_complexity Low_complexity 1 67 0 1660 147 4 12 chr2 101229268 101229526 -149458328 + AluSx SINE Alu 47 302 -10 257 75 25 0 chr2 101229665 101229705 -149458149 + (CA)n Simple_repeat Simple_repeat 2 42 0 1582 238 18 91 chr2 101230476 101231136 -149456718 + LTR9 LTR ERV1 1 612 0 1602 140 25 80 chr2 101231359 101231673 -149456181 - AluJo SINE Alu -15 297 1 431 186 101 0 chr2 101232349 101232478 -149455376 + MER5C DNA MER1_type 138 279 -45 235 333 154 8 chr2 101233421 101233538 -149454316 + L2 LINE L2 3136 3269 -3 220 308 83 17 chr2 101234340 101234460 -149453394 - MIR SINE MIR -125 137 10 940 188 6 0 chr2 101234965 101235161 -149452693 - AluJb SINE Alu 0 312 132 2597 124 3 3 chr2 101236379 101236743 -149451111 + THE1B LTR MaLR 1 364 0 7312 108 14 38 chr2 101236743 101237846 -149450008 + THE1B-int LTR MaLR 1 1076 -504 1110 230 31 153 chr2 101237846 101238598 -149449256 - PABL_B LTR ERV1 0 667 1 3598 87 46 0 chr2 101238601 101239083 -149448771 + THE1B-int LTR MaLR 1077 1580 0 2241 96 3 0 chr2 101239083 101239375 -149448479 + THE1B LTR MaLR 1 293 -71 690 113 10 0 chr2 101239475 101239572 -149448282 - AluS SINE Alu -214 99 2 33 25 0 0 chr2 101239576 101239616 -149448238 + AT_rich Low_complexity Low_complexity 1 40 0 233 306 61 0 chr2 101243467 101243565 -149444289 - MIR SINE MIR -75 187 84 214 282 13 13 chr2 101243936 101244014 -149443840 - MIR SINE MIR -22 240 163 1913 149 17 0 chr2 101244262 101244557 -149443297 - AluSx SINE Alu -12 300 1 639 141 0 0 chr2 101247864 101247956 -149439898 - AluJ/FLAM SINE Alu -220 92 1 2305 85 0 7 chr2 101248103 101248397 -149439457 - AluSq SINE Alu -21 292 1 274 299 102 54 chr2 101249473 101249640 -149438214 + MIR3 SINE MIR 25 199 -9 840 273 14 7 chr2 101250102 101250384 -149437470 + L1ME1 LINE L1 4780 5063 -1083 790 244 14 5 chr2 101250404 101250613 -149437241 + L1ME1 LINE L1 5188 5398 -748 203 277 15 0 chr2 101251308 101251373 -149436481 - L3b LINE CR1 -361 1222 1157 232 162 0 0 chr2 101251434 101251471 -149436383 - 5S rRNA rRNA -46 75 39 237 260 110 0 chr2 101251836 101251936 -149435918 - MER5B DNA MER1_type -63 115 5 198 234 52 39 chr2 101254592 101254669 -149433185 - L3 LINE CR1 -80 1497 1420 564 151 50 34 chr2 101254754 101254873 -149432981 + MER53 DNA DNA 1 121 -68 614 138 99 94 chr2 101254938 101255119 -149432735 + MER53 DNA DNA 6 187 -2 376 266 76 13 chr2 101255239 101255397 -149432457 + MIR SINE MIR 39 206 -56 737 207 87 54 chr2 101255610 101255852 -149432002 + L1MB8 LINE L1 5929 6178 0 24 0 0 0 chr2 101256158 101256182 -149431672 + AT_rich Low_complexity Low_complexity 1 24 0 463 322 35 77 chr2 101256191 101256322 -149431532 + L1M4 LINE L1 3073 3208 -2938 2255 112 0 0 chr2 101256322 101256616 -149431238 + AluSx SINE Alu 2 295 -17 463 322 35 77 chr2 101256616 101257053 -149430801 + L1M4 LINE L1 3208 3617 -2529 1756 42 5 0 chr2 101257184 101257396 -149430458 + L1PA5 LINE L1 5939 6151 -3 2326 123 0 0 chr2 101257729 101258039 -149429815 - AluSx SINE Alu -2 310 1 2242 109 3 3 chr2 101260533 101260837 -149427017 + AluSc SINE Alu 1 304 -5 1997 101 0 36 chr2 101261018 101261294 -149426560 - AluSq SINE Alu -47 266 1 180 0 0 0 chr2 101262093 101262113 -149425741 + (CCA)n Simple_repeat Simple_repeat 1 20 0 2289 86 0 27 chr2 101262964 101263265 -149424589 - AluSx SINE Alu -19 293 1 1747 224 80 31 chr2 101263457 101263682 -149424172 + L1ME1 LINE L1 5584 5797 -369 2299 123 3 0 chr2 101263682 101263992 -149423862 - AluSx SINE Alu -1 311 1 1747 224 80 31 chr2 101263992 101264306 -149423548 + L1ME1 LINE L1 5797 6149 -17 526 148 0 11 chr2 101265134 101265222 -149422632 + MSTA LTR MaLR 342 428 0 414 311 72 6 chr2 101266445 101266612 -149421242 - L2 LINE L2 -461 2853 2676 2330 287 57 51 chr2 101266714 101267618 -149420236 - L1MEc LINE L1 -4734 1662 745 1707 167 0 21 chr2 101267618 101267900 -149419954 + AluJb SINE Alu 1 276 -36 2330 287 57 51 chr2 101267900 101268439 -149419415 - L1MEc LINE L1 -5651 745 211 2211 134 0 0 chr2 101268900 101269207 -149418647 + AluSq SINE Alu 1 307 -6 2342 115 126 5 chr2 101269499 101269881 -149417973 + MSTA LTR MaLR 1 428 0 224 286 13 0 chr2 101270413 101270490 -149417364 + MER5A DNA MER1_type 29 106 -83 1975 164 3 0 chr2 101271229 101271540 -149416314 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 101272639 101272660 -149415194 + AT_rich Low_complexity Low_complexity 1 21 0 2170 125 0 0 chr2 101272663 101273000 -149414854 + AluSx SINE Alu 1 337 0 247 217 14 14 chr2 101273299 101273368 -149414486 + MER117 DNA MER1_type 51 119 -78 313 322 17 42 chr2 101273434 101273552 -149414302 + MIR3 SINE MIR 69 183 -25 2045 125 0 35 chr2 101273964 101274283 -149413571 + AluSx SINE Alu 1 308 -4 24 0 0 0 chr2 101274877 101274901 -149412953 + AT_rich Low_complexity Low_complexity 1 24 0 1966 130 0 71 chr2 101274999 101275321 -149412533 + AluSq SINE Alu 1 299 -14 1208 262 24 82 chr2 101275434 101275888 -149411966 + L1MDb LINE L1 10 437 -5972 2318 111 36 28 chr2 101275924 101276285 -149411569 + THE1B LTR MaLR 1 364 0 1729 212 117 51 chr2 101276290 101277043 -149410811 + L1MDb LINE L1 759 1552 -4854 1593 182 191 2 chr2 101277043 101277467 -149410387 - MLT1D LTR MaLR 0 505 2 1729 212 117 51 chr2 101277467 101277519 -149410335 + L1MDb LINE L1 1552 1599 -4807 2092 93 7 65 chr2 101277525 101277835 -149410019 + AluSx SINE Alu 1 292 -20 2190 113 0 31 chr2 101277838 101278157 -149409697 + AluSc SINE Alu 1 309 0 180 0 0 0 chr2 101278399 101278419 -149409435 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2035 157 44 18 chr2 101278426 101278814 -149409040 + MER65A LTR ERV1 41 438 -7 2745 258 70 7 chr2 101278883 101279569 -149408285 - MER21B LTR ERV1 -113 750 22 336 211 22 56 chr2 101279596 101279686 -149408168 - MER21B LTR ERV1 -776 87 1 1759 232 85 65 chr2 101279687 101280234 -149407620 + L1MDb LINE L1 1609 2143 -4263 2755 174 31 71 chr2 101280234 101280842 -149407012 - LTR9 LTR ERV1 -1 611 28 2336 112 0 0 chr2 101280842 101281145 -149406709 - AluSc SINE Alu -6 303 1 2755 174 31 71 chr2 101281145 101281172 -149406682 - LTR9 LTR ERV1 -584 28 1 1759 232 85 65 chr2 101281172 101281402 -149406452 + L1MDb LINE L1 2143 2407 -3999 2021 127 3 11 chr2 101281402 101281713 -149406141 + AluSx SINE Alu 1 309 0 1759 232 85 65 chr2 101281713 101281755 -149406099 + L1MDb LINE L1 2407 2447 -3959 5618 119 41 16 chr2 101281755 101282715 -149405139 - MER11C LTR ERVK 0 1071 1 8563 45 1 0 chr2 101282715 101283711 -149404143 - HERVK11 LTR ERVK 0 7953 6957 * 15912 61 15 1 chr2 101283696 101285686 -149402168 - HERVK11 LTR ERVK -1186 6767 4751 316 75 0 0 chr2 101285686 101285726 -149402128 - MER11A LTR ERVK -1226 40 1 827 142 0 0 chr2 101285799 101285926 -149401928 + AluSg/x SINE Alu 180 306 -6 1026 84 70 0 chr2 101286056 101286234 -149401620 - AluY SINE Alu 0 320 133 1972 129 0 55 chr2 101286241 101286551 -149401303 + AluSx SINE Alu 1 293 -19 470 209 80 42 chr2 101286587 101286850 -149401004 + L1MDb LINE L1 3341 3613 -2793 * 823 201 21 26 chr2 101286828 101287017 -149400837 + L1M4 LINE L1 1 188 -6354 488 204 274 26 chr2 101287017 101287267 -149400587 + LTR8A LTR ERV1 1 288 -435 3352 222 112 80 chr2 101287525 101288751 -149399103 + L1M4b LINE L1 -486 778 -5506 2081 129 75 6 chr2 101288755 101289088 -149398766 - LTR26 LTR ERV1 0 603 248 525 176 0 0 chr2 101290376 101290461 -149397393 - LTR26 LTR ERV1 -340 263 179 807 30 20 10 chr2 101290461 101290562 -149397292 - AluY SINE Alu -16 295 194 992 200 11 0 chr2 101290562 101290752 -149397102 - LTR26 LTR ERV1 -411 192 1 1119 190 36 12 chr2 101290755 101291008 -149396846 + L1M4b LINE L1 782 1040 -5244 183 80 0 0 chr2 101291025 101291050 -149396804 + (CA)n Simple_repeat Simple_repeat 2 26 0 286 221 176 0 chr2 101291050 101291118 -149396736 - Tigger5 DNA MER2_type -2 2321 2242 846 146 8 0 chr2 101291120 101291243 -149396611 + FLAM_C SINE Alu 2 125 -18 309 173 19 0 chr2 101291268 101291320 -149396534 - Tigger5 DNA MER2_type -2270 53 1 1385 235 42 17 chr2 101291325 101291769 -149396085 + L1M4b LINE L1 1053 1488 -4896 720 179 0 0 chr2 101291781 101291898 -149395956 + LTR26 LTR ERV1 147 263 -340 609 243 21 124 chr2 101291950 101292328 -149395526 + L1M4b LINE L1 1503 1841 -4543 314 258 98 15 chr2 101292531 101292663 -149395191 + L1MCc LINE L1 17 159 -6264 263 253 114 63 chr2 101292683 101292841 -149395013 + L1MCc LINE L1 224 389 -6034 198 307 114 11 chr2 101293486 101293574 -149394280 - MIR SINE MIR -138 124 28 322 236 99 68 chr2 101293855 101294016 -149393838 - L1MCc LINE L1 -6034 389 224 452 196 27 68 chr2 101294036 101294184 -149393670 - L1MCc LINE L1 -6265 158 17 380 328 85 43 chr2 101294194 101294569 -149393285 - L1 LINE L1 -960 5186 4796 467 333 35 12 chr2 101294638 101294893 -149392961 - L1 LINE L1 -1478 4668 4408 356 156 16 0 chr2 101294927 101294991 -149392863 + MLT1J1 LTR MaLR 35 99 -347 924 121 0 0 chr2 101295308 101295432 -149392422 - FLAM_C SINE Alu -19 124 1 250 200 175 0 chr2 101296443 101296523 -149391331 - L1MB3 LINE L1 -3 6180 6087 39 22 0 0 chr2 101296527 101296573 -149391281 + AT_rich Low_complexity Low_complexity 1 46 0 772 180 0 23 chr2 101296573 101296701 -149391153 - FLAM_C SINE Alu -17 126 2 204 125 0 0 chr2 101297741 101297773 -149390081 + (TG)n Simple_repeat Simple_repeat 1 32 0 285 284 108 0 chr2 101298572 101298674 -149389180 - L2 LINE L2 0 3272 3160 2330 71 0 29 chr2 101298678 101298989 -149388865 - AluY SINE Alu -9 302 1 22 56 0 0 chr2 101301167 101301203 -149386651 + AT_rich Low_complexity Low_complexity 1 36 0 249 108 0 0 chr2 101301728 101301765 -149386089 + (CA)n Simple_repeat Simple_repeat 2 38 0 788 62 0 18 chr2 101301800 101301912 -149385942 - L1PA5 LINE L1 0 6154 6045 365 298 74 53 chr2 101303278 101303563 -149384291 + L3 LINE CR1 583 873 -704 350 329 41 27 chr2 101303755 101303901 -149383953 + L3 LINE CR1 1201 1348 -229 889 243 84 69 chr2 101305160 101305704 -149382150 - L1M4c LINE L1 -4786 1860 1299 1586 192 41 0 chr2 101305704 101305996 -149381858 - AluJo SINE Alu -8 304 1 889 243 84 69 chr2 101305996 101306181 -149381673 - L1M4c LINE L1 -5347 1299 1118 1995 131 0 30 chr2 101306181 101306486 -149381368 - AluSg SINE Alu -14 296 1 214 301 113 15 chr2 101307031 101307164 -149380690 + L2 LINE L2 2160 2305 -1009 329 174 43 0 chr2 101307374 101307443 -149380411 - MER69 DNA AcHobo -7 2519 2448 2117 86 0 80 chr2 101307456 101307769 -149380085 - AluSx SINE Alu -24 288 1 2401 52 0 43 chr2 101308450 101308775 -149379079 - AluY SINE Alu 0 311 1 1542 143 33 13 chr2 101309134 101309434 -149378420 + L1MA8 LINE L1 5981 6286 -5 1587 106 5 5 chr2 101309643 101309860 -149377994 + AluY SINE Alu 1 217 -94 24 0 0 0 chr2 101309874 101309898 -149377956 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 101310331 101310353 -149377501 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 101310366 101310402 -149377452 + AT_rich Low_complexity Low_complexity 1 36 0 2366 93 0 7 chr2 101311225 101311527 -149376327 - AluSx SINE Alu -12 300 1 2349 165 71 11 chr2 101312371 101312922 -149374932 - Cheshire DNA MER1_type 0 2420 1837 309 221 21 53 chr2 101313034 101313129 -149374725 - Cheshire DNA MER1_type -601 1819 1728 588 330 53 10 chr2 101313261 101313752 -149374102 - L1M4 LINE L1 -2040 4106 3595 265 83 0 0 chr2 101314296 101314332 -149373522 - U2 snRNA snRNA -152 36 1 2152 141 0 0 chr2 101314870 101315175 -149372679 + AluSx SINE Alu 1 305 -7 1746 252 67 44 chr2 101315286 101316031 -149371823 - L1ME3 LINE L1 -28 6203 5442 1622 253 214 30 chr2 101316248 101317467 -149370387 - L1ME3 LINE L1 -1022 5193 3751 1139 265 105 81 chr2 101317453 101317696 -149370158 - L1ME3 LINE L1 -2974 3241 3005 * 2465 78 3 0 chr2 101317696 101318005 -149369849 + AluY SINE Alu 1 310 -1 1139 265 105 81 chr2 101318005 101320024 -149367830 - L1ME3 LINE L1 -3210 3005 954 452 214 95 0 chr2 101320042 101320168 -149367686 - MLT1I LTR MaLR -271 138 1 197 261 0 148 chr2 101320168 101320205 -149367649 - MIR SINE MIR -163 99 58 1772 149 10 26 chr2 101320205 101320507 -149367347 + AluSx SINE Alu 4 300 -12 2184 101 28 0 chr2 101320507 101320794 -149367060 + AluSc SINE Alu 1 295 -14 197 261 0 148 chr2 101320794 101320843 -149367011 - MIR SINE MIR -202 60 25 1521 253 81 41 chr2 101320998 101321639 -149366215 - L1ME3A LINE L1 -5 6165 5499 969 184 90 11 chr2 101321640 101321918 -149365936 + Charlie5 DNA MER1_type 2325 2624 0 294 267 131 37 chr2 101323012 101323203 -149364651 - L2 LINE L2 -27 3286 3078 211 236 16 106 chr2 101323219 101323342 -149364512 - L2 LINE L2 -366 2947 2836 180 0 0 0 chr2 101323448 101323468 -149364386 + (CA)n Simple_repeat Simple_repeat 1 20 0 1589 134 45 84 chr2 101324829 101325187 -149362667 - MER7A DNA MER2_type 0 346 4 237 33 0 0 chr2 101325774 101325804 -149362050 + (CAA)n Simple_repeat Simple_repeat 2 31 0 225 0 0 0 chr2 101327447 101327472 -149360382 + (CA)n Simple_repeat Simple_repeat 2 26 0 333 272 132 48 chr2 101327766 101327912 -149359942 + MIR SINE MIR 2 175 -87 2225 87 10 10 chr2 101327912 101328211 -149359643 + AluSp SINE Alu 1 299 -14 333 272 132 48 chr2 101328211 101328292 -149359562 + MIR SINE MIR 175 248 -14 2325 88 0 0 chr2 101328488 101328772 -149359082 - AluSx SINE Alu -16 296 13 1697 220 53 21 chr2 101328811 101329476 -149358378 + Charlie1a DNA MER1_type 2 737 -718 2443 244 53 33 chr2 101329526 101329562 -149358292 + MER21B LTR ERV1 12 46 -817 2267 109 61 17 chr2 101329562 101329921 -149357933 + THE1C LTR MaLR 1 375 0 2443 244 53 33 chr2 101329921 101330637 -149357217 + MER21B LTR ERV1 46 779 -84 1981 173 97 11 chr2 101330648 101331173 -149356681 + Charlie1a DNA MER1_type 886 1455 0 744 188 14 0 chr2 101332255 101332393 -149355461 - AluJo SINE Alu -172 140 1 313 283 11 0 chr2 101332583 101332675 -149355179 + MLT1J2 LTR MaLR 100 192 -258 242 308 128 0 chr2 101332711 101332828 -149355026 + MLT1J2 LTR MaLR 266 397 -53 1019 216 23 33 chr2 101333091 101333396 -149354458 + L1MB8 LINE L1 2621 2922 -3224 1230 108 9 37 chr2 101333397 101333611 -149354243 - THE1B LTR MaLR -1 363 156 273 228 0 0 chr2 101334151 101334230 -149353624 + A-rich Low_complexity Low_complexity 1 79 0 1050 78 98 0 chr2 101337367 101337520 -149350334 - THE1B LTR MaLR -196 168 1 7239 223 67 21 chr2 101337520 101338186 -149349668 + L1MB8 LINE L1 2918 3552 -2594 1953 160 36 33 chr2 101338186 101338549 -149349305 - THE1B LTR MaLR 0 364 1 7239 223 67 21 chr2 101338549 101340100 -149347754 + L1MB8 LINE L1 3552 5244 -902 2405 156 21 32 chr2 101340100 101340531 -149347323 - MSTB LTR MaLR 0 426 1 7239 223 67 21 chr2 101340531 101340587 -149347267 + L1MB8 LINE L1 5244 5296 -850 1273 198 51 3 chr2 101340687 101340980 -149346874 + L1MB8 LINE L1 5867 6173 -5 1894 137 3 18 chr2 101340998 101341282 -149346572 + AluSg SINE Alu 1 280 -30 513 0 0 0 chr2 101341282 101341339 -149346515 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 1408 194 78 4 chr2 101341376 101341758 -149346096 + MLT2B2 LTR ERVL 1 454 -61 242 232 43 0 chr2 101341810 101341879 -149345975 + (TA)n Simple_repeat Simple_repeat 1 72 0 283 316 51 0 chr2 101342009 101342126 -149345728 + MIR3 SINE MIR 81 203 -5 286 319 94 7 chr2 101342801 101342939 -149344915 - MER5B DNA MER1_type -28 150 1 399 309 29 61 chr2 101343197 101343443 -149344411 - HsTC2 DNA Tc2 -1020 878 641 1878 146 4 7 chr2 101343686 101343966 -149343888 + AluJb SINE Alu 19 297 -15 236 318 16 0 chr2 101344244 101344307 -149343547 - L2 LINE L2 -4 3309 3246 428 260 19 19 chr2 101344363 101344517 -149343337 - MER112 DNA MER1_type -6 254 101 1926 156 7 0 chr2 101344517 101344805 -149343049 + AluJb SINE Alu 1 290 -22 1172 263 45 7 chr2 101344979 101345420 -149342434 + L1M4 LINE L1 3672 4129 -2017 241 125 0 0 chr2 101345498 101345538 -149342316 - MIR SINE MIR -57 205 166 1137 251 89 19 chr2 101345573 101345750 -149342104 - L1M4 LINE L1 -2578 3568 3405 2334 111 11 6 chr2 101345750 101346103 -149341751 + THE1A LTR MaLR 1 355 0 1137 251 89 19 chr2 101346103 101346498 -149341356 - L1M4 LINE L1 -2741 3405 2956 1727 168 7 7 chr2 101346785 101347070 -149340784 + AluJb SINE Alu 1 285 -27 396 55 0 0 chr2 101347072 101347127 -149340727 + (TG)n Simple_repeat Simple_repeat 2 56 0 1904 133 13 37 chr2 101347146 101347521 -149340333 + MER4E LTR ERV1 2 367 -399 2463 66 3 0 chr2 101347522 101347824 -149340030 + AluY SINE Alu 1 303 -8 628 231 71 35 chr2 101347847 101348221 -149339633 - MLT2F LTR ERVL -8 655 189 572 56 0 0 chr2 101349032 101349103 -149338751 - THE1C LTR MaLR -183 192 122 378 311 102 57 chr2 101349204 101349487 -149338367 + L2 LINE L2 2962 3257 -15 4871 218 50 67 chr2 101349492 101349637 -149338217 - L1M LINE L1 -756 5390 5244 2078 129 70 28 chr2 101349637 101349993 -149337861 + THE1C LTR MaLR 1 371 -4 4871 218 50 67 chr2 101349993 101350362 -149337492 - L1M LINE L1 -902 5244 4870 4803 126 0 0 chr2 101350362 101351029 -149336825 + L1PA13 LINE L1 5497 6163 0 4871 218 50 67 chr2 101351029 101351632 -149336222 - L1M LINE L1 -1276 4870 4363 1701 100 93 70 chr2 101351632 101351932 -149335922 - AluSp SINE Alu -6 307 1 4871 218 50 67 chr2 101351932 101352483 -149335371 - L1M LINE L1 -1783 4363 3804 1909 162 16 0 chr2 101352521 101352824 -149335030 + AluSx SINE Alu 1 308 -4 489 273 156 0 chr2 101352824 101352952 -149334902 - L1MDa LINE L1 -6271 269 122 432 339 40 6 chr2 101354163 101354340 -149333514 - MER5A DNA MER1_type 0 189 7 23 0 0 0 chr2 101355586 101355609 -149332245 + AT_rich Low_complexity Low_complexity 1 23 0 415 252 0 17 chr2 101358394 101358509 -149329345 - LTR33A LTR ERVL 0 523 411 2133 227 97 29 chr2 101358509 101359140 -149328714 + L1ME1 LINE L1 5470 6143 -23 474 170 53 11 chr2 101359144 101359238 -149328616 + MER4A LTR ERV1 1 98 -566 1476 152 33 82 chr2 101359238 101359601 -149328253 + MER4A LTR ERV1 261 664 0 11639 109 144 109 chr2 101359604 101361239 -149326615 + MER4A-int LTR ERV1 1 1578 -5020 2311 101 7 0 chr2 101361239 101361535 -149326319 + AluY SINE Alu 1 298 -13 11639 109 144 109 chr2 101361535 101363408 -149324446 + MER4A-int LTR ERV1 1578 3680 -2918 * 17827 91 47 19 chr2 101363407 101364065 -149323789 + MER4A-int LTR ERV1 3836 4474 -2124 3902 73 4 0 chr2 101364065 101364542 -149323312 - L1PA5 LINE L1 -6 6148 5670 17827 91 47 19 chr2 101364542 101366567 -149321287 + MER4A-int LTR ERV1 4474 6596 -2 631 101 10 20 chr2 101366575 101366674 -149321180 + MER4A LTR ERV1 1 98 -566 1662 143 11 77 chr2 101366674 101367044 -149320810 + MER4A LTR ERV1 261 664 0 276 146 0 0 chr2 101367947 101367988 -149319866 + MER34C LTR ERV1 1 41 -544 2917 156 79 18 chr2 101367989 101368418 -149319436 + MER34C LTR ERV1 7 477 -108 1454 174 38 123 chr2 101368418 101368815 -149319039 - MLT1A1 LTR MaLR -2 363 1 2917 156 79 18 chr2 101368815 101368931 -149318923 + MER34C LTR ERV1 477 585 0 2554 108 12 0 chr2 101369403 101369746 -149318108 - L1PA11 LINE L1 0 6174 5828 2525 65 0 0 chr2 101369916 101370210 -149317644 - AluY SINE Alu -17 294 1 934 214 47 45 chr2 101370371 101370823 -149317031 + MLT1H LTR MaLR 3 548 -1 682 68 11 0 chr2 101371126 101371214 -149316640 - THE1B LTR MaLR -81 283 195 2000 128 21 0 chr2 101371316 101371605 -149316249 + AluSg SINE Alu 1 295 -15 336 159 32 30 chr2 101371633 101371733 -149316121 - L1M4 LINE L1 -351 5823 5725 216 224 0 20 chr2 101371734 101371783 -149316071 + CT-rich Low_complexity Low_complexity 2 49 0 970 240 65 48 chr2 101372143 101372543 -149315311 - MER74B LTR ERVL -138 484 78 288 0 0 0 chr2 101372565 101372597 -149315257 + (TG)n Simple_repeat Simple_repeat 1 32 0 2272 91 3 26 chr2 101372658 101372965 -149314889 - AluSx SINE Alu -12 300 1 2863 173 33 8 chr2 101372967 101373476 -149314378 + Tigger7 DNA MER2_type 1 522 -1965 550 185 0 0 chr2 101373475 101373567 -149314287 + Tigger7 DNA MER2_type 2400 2491 0 * 545 313 96 56 chr2 101373700 101374369 -149313485 - L1M4 LINE L1 -1327 4819 4121 1534 197 84 35 chr2 101374369 101374740 -149313114 - MLT1B LTR MaLR 0 390 2 545 313 96 56 chr2 101374740 101374761 -149313093 - L1M4 LINE L1 -2025 4121 4102 21 0 0 0 chr2 101374798 101374819 -149313035 + AT_rich Low_complexity Low_complexity 1 21 0 2360 97 0 0 chr2 101375541 101375841 -149312013 + AluSg SINE Alu 1 300 -10 701 285 31 22 chr2 101376019 101376247 -149311607 + MIR SINE MIR 33 262 0 338 309 144 0 chr2 101377819 101377958 -149309896 - L3 LINE CR1 -5 1572 1414 479 340 45 16 chr2 101378161 101378405 -149309449 - L3 LINE CR1 -166 1411 1161 353 286 272 0 chr2 101378529 101378742 -149309112 - L3 LINE CR1 -672 905 635 1218 204 6 58 chr2 101379589 101379902 -149307952 - L1MA4 LINE L1 -7 6293 5997 187 79 53 0 chr2 101379989 101380027 -149307827 + (TA)n Simple_repeat Simple_repeat 2 41 0 1960 119 46 0 chr2 101380341 101380626 -149307228 + AluSx SINE Alu 5 302 -10 633 294 91 26 chr2 101380919 101381150 -149306704 + MIR SINE MIR 14 259 -3 228 261 69 31 chr2 101381658 101381788 -149306066 + MIR3 SINE MIR 52 186 -22 373 247 110 48 chr2 101381977 101382123 -149305731 - L2 LINE L2 0 3313 3159 2287 113 3 0 chr2 101382159 101382468 -149305386 + AluSx SINE Alu 1 310 -2 2170 99 3 0 chr2 101384419 101384703 -149303151 - AluSx SINE Alu -27 285 1 1900 116 11 7 chr2 101384900 101385176 -149302678 - AluSq SINE Alu -7 306 30 219 155 17 69 chr2 101386015 101386073 -149301781 + MIR3 SINE MIR 100 154 -54 448 175 165 0 chr2 101386406 101386503 -149301351 - MER81 DNA DNA 0 114 2 816 182 94 12 chr2 101387319 101387489 -149300365 - MER5A DNA MER1_type 0 189 6 193 374 159 0 chr2 101387997 101388104 -149299750 + MIR3 SINE MIR 37 160 -48 464 262 54 0 chr2 101388163 101388312 -149299542 - MER103 DNA DNA -9 157 1 1531 199 29 0 chr2 101389843 101390120 -149297734 + MER21B LTR ERV1 1 285 -578 1691 206 59 53 chr2 101390121 101390704 -149297150 + LTR24B LTR ERV1 1 569 -7 1945 151 88 19 chr2 101390704 101391131 -149296723 + MER21B LTR ERV1 283 794 -69 528 272 48 31 chr2 101391330 101391566 -149296288 + MIR SINE MIR 30 262 0 2077 188 98 103 chr2 101391689 101392271 -149295583 - LTR8A LTR ERV1 0 727 148 2201 120 0 3 chr2 101392271 101392580 -149295274 + AluSx SINE Alu 3 310 -2 2077 188 98 103 chr2 101392580 101392725 -149295129 - LTR8A LTR ERV1 -579 148 4 327 356 57 28 chr2 101393875 101394052 -149293802 - MIR3 SINE MIR -11 197 16 1127 246 64 55 chr2 101394076 101394528 -149293326 - MLT1C LTR MaLR -2 465 10 2674 181 77 28 chr2 101394737 101395269 -149292585 + MER74A LTR ERVL 1 558 0 216 285 93 93 chr2 101395391 101395563 -149292291 - L3 LINE CR1 -10 1567 1396 262 205 195 55 chr2 101396034 101396146 -149291708 + MIR SINE MIR 29 152 -56 974 172 23 11 chr2 101396150 101396324 -149291530 + LTR40b LTR ERVL 1 176 -286 363 270 144 44 chr2 101396350 101396894 -149290960 - L1M4c LINE L1 -4785 1430 857 365 283 125 44 chr2 101397232 101397617 -149290237 + L1ME3 LINE L1 5683 6098 -72 2200 74 30 27 chr2 101397666 101397962 -149289892 + AluSc SINE Alu 1 297 -12 512 246 171 30 chr2 101398244 101398359 -149289495 + MIR SINE MIR 36 133 -129 2078 133 0 3 chr2 101398359 101398675 -149289179 - AluSx SINE Alu 0 312 1 512 246 171 30 chr2 101398675 101398758 -149289096 + MIR SINE MIR 133 262 0 638 220 23 29 chr2 101398881 101399053 -149288801 + MIR SINE MIR 24 194 -62 1109 182 9 45 chr2 101399053 101399108 -149288746 + AluJb SINE Alu 88 143 -169 2071 136 3 13 chr2 101399108 101399417 -149288437 + AluSx SINE Alu 1 306 -6 1109 182 9 45 chr2 101399417 101399581 -149288273 + AluJb SINE Alu 143 299 -13 272 268 45 45 chr2 101399759 101399871 -149287983 - MLT1J2 LTR MaLR -1 449 338 2457 70 3 3 chr2 101400008 101400307 -149287547 - AluY SINE Alu -12 299 1 426 283 42 0 chr2 101400313 101400433 -149287421 - MLT1J1 LTR MaLR -317 129 5 337 264 79 36 chr2 101400444 101400584 -149287270 - MIR SINE MIR -111 151 6 755 276 49 53 chr2 101401501 101401913 -149285941 - LTR35 LTR ERV1 0 556 140 233 253 71 30 chr2 101402056 101402155 -149285699 - MLT1J LTR MaLR -33 478 376 2097 104 20 7 chr2 101402651 101402948 -149284906 + AluSx SINE Alu 1 301 -11 254 302 35 35 chr2 101403192 101403308 -149284546 + L2 LINE L2 3180 3295 -18 283 371 30 8 chr2 101404187 101404319 -149283535 + L2 LINE L2 3138 3272 0 6064 116 8 0 chr2 101405027 101406035 -149281819 - L1PA16 LINE L1 -1 6165 5144 595 175 56 28 chr2 101406132 101406275 -149281579 - LTR65 LTR ERV1 -520 149 3 761 271 0 0 chr2 101406747 101406935 -149280919 - MER5A DNA MER1_type 0 189 2 230 67 0 0 chr2 101407079 101407109 -149280745 - MLT1F1 LTR MaLR 0 567 538 479 326 37 14 chr2 101407124 101407342 -149280512 + L1M4b LINE L1 11 233 -6626 2456 237 58 35 chr2 101407928 101408561 -149279293 + L1M4b LINE L1 930 1547 -5412 2019 134 0 0 chr2 101408561 101408837 -149279017 + AluSc SINE Alu 3 278 -31 273 119 0 0 chr2 101408840 101408882 -149278972 + (TA)n Simple_repeat Simple_repeat 2 43 0 2456 237 58 35 chr2 101408882 101409462 -149278392 + L1M4b LINE L1 1548 2175 -4784 * 5826 161 7 13 chr2 101409456 101411139 -149276715 + L1PB1 LINE L1 4440 6113 -38 342 0 0 0 chr2 101411145 101411183 -149276671 + (ATG)n Simple_repeat Simple_repeat 2 39 0 430 266 43 122 chr2 101411191 101411235 -149276619 + L1M4b LINE L1 2339 2385 -4753 2052 137 9 3 chr2 101411235 101411556 -149276298 + L1MC1 LINE L1 6005 6327 -6 430 266 43 122 chr2 101411556 101411648 -149276206 + L1M4b LINE L1 2385 2483 -4655 2601 131 33 17 chr2 101411648 101412069 -149275785 + MSTA LTR MaLR 1 428 0 430 266 43 122 chr2 101412069 101412349 -149275505 + L1M4b LINE L1 2483 2723 -4415 233 285 77 48 chr2 101412453 101412765 -149275089 + L1M4b LINE L1 2565 2885 -4253 1646 181 3 31 chr2 101412769 101413061 -149274793 + AluSx SINE Alu 1 284 -28 2715 242 39 18 chr2 101413167 101414064 -149273790 + L1M4b LINE L1 2892 3769 -3188 2127 117 7 10 chr2 101414064 101414363 -149273491 + AluSg SINE Alu 1 298 -12 2715 242 39 18 chr2 101414363 101415024 -149272830 + L1M4b LINE L1 3769 4986 -1971 769 285 54 20 chr2 101415027 101415338 -149272516 + L1MDb LINE L1 61 341 -6199 706 223 40 0 chr2 101415468 101415643 -149272211 + L1MDb LINE L1 2810 2991 -3549 2010 223 38 38 chr2 101416796 101417124 -149270730 + L1MDb LINE L1 2990 3317 -3223 1742 182 0 3 chr2 101417124 101417431 -149270423 + AluJo SINE Alu 1 306 -6 2010 223 38 38 chr2 101417431 101417761 -149270093 + L1MDb LINE L1 3316 3648 -2892 348 200 0 14 chr2 101417766 101417836 -149270018 - MER5B DNA MER1_type -109 69 1 2291 98 3 22 chr2 101417950 101418267 -149269587 + AluSx SINE Alu 1 311 -1 345 298 73 0 chr2 101418327 101418451 -149269403 + MIR SINE MIR 100 232 -30 292 289 24 0 chr2 101418710 101418793 -149269061 - MLT1L LTR MaLR -382 233 149 317 185 115 46 chr2 101418798 101418928 -149268926 - MER5B DNA MER1_type -39 139 1 402 259 19 46 chr2 101419060 101419133 -149268721 + MER5A DNA MER1_type 4 78 -111 1686 180 11 3 chr2 101419133 101419416 -149268438 + AluJo SINE Alu 1 285 -27 402 259 19 46 chr2 101419416 101419534 -149268320 + MER5A DNA MER1_type 78 189 0 1637 178 100 28 chr2 101419882 101420388 -149267466 - MLT2A2 LTR ERVL 0 554 16 1085 170 0 0 chr2 101420630 101420840 -149267014 - AluSq SINE Alu 0 337 128 188 0 74 0 chr2 101420843 101420870 -149266984 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2173 96 0 14 chr2 101420882 101421162 -149266692 - AluSg SINE Alu -34 276 1 413 191 19 38 chr2 101421319 101421424 -149266430 + MER53 DNA DNA 7 109 -80 937 215 49 0 chr2 101421698 101421921 -149265933 - AluSx SINE Alu -18 294 61 1751 147 8 4 chr2 101422341 101422607 -149265247 - AluSc SINE Alu -40 269 3 1075 156 13 56 chr2 101423305 101423536 -149264318 + AluSq SINE Alu 1 221 -92 268 195 37 24 chr2 101423984 101424066 -149263788 + GA-rich Low_complexity Low_complexity 4 86 0 490 73 0 37 chr2 101424067 101424149 -149263705 + (GAAA)n Simple_repeat Simple_repeat 1 79 0 2205 91 49 0 chr2 101424441 101424727 -149263127 - AluSq SINE Alu -13 300 1 301 193 114 53 chr2 101425040 101425154 -149262700 + MIR SINE MIR 17 137 -71 764 168 0 0 chr2 101426471 101426596 -149261258 + FRAM SINE Alu 31 155 -21 2425 87 3 0 chr2 101427526 101427826 -149260028 - AluSp SINE Alu -7 306 6 1937 162 0 10 chr2 101428060 101428362 -149259492 - AluSx SINE Alu -13 299 1 545 156 37 9 chr2 101428371 101428480 -149259374 - MER8 DNA MER2_type -127 112 1 189 0 0 0 chr2 101428514 101428535 -149259319 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 1244 264 88 0 chr2 101428610 101428939 -149258915 - MER119 DNA MER1_type -225 358 1 2441 60 0 3 chr2 101428997 101429297 -149258557 + AluY SINE Alu 12 310 -1 24 53 0 0 chr2 101429668 101429706 -149258148 + GC_rich Low_complexity Low_complexity 1 38 0 409 288 149 19 chr2 101430222 101430437 -149257417 - MIR SINE MIR -1 261 19 2319 106 0 10 chr2 101430438 101430750 -149257104 - AluSx SINE Alu -3 309 1 619 207 154 21 chr2 101431673 101431861 -149255993 + MER20B DNA MER1_type 305 517 -266 1908 104 8 4 chr2 101432040 101432291 -149255563 - AluSg SINE Alu -15 295 44 754 94 0 0 chr2 101432291 101432387 -149255467 - AluSg SINE Alu -212 98 3 354 218 68 23 chr2 101432388 101432521 -149255333 + MER20B DNA MER1_type 643 781 -2 378 0 0 0 chr2 101432779 101432821 -149255033 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 1930 70 50 0 chr2 101432821 101433079 -149254775 - L1PB1 LINE L1 -7 6144 5874 2270 67 0 0 chr2 101433099 101433368 -149254486 + AluY SINE Alu 28 296 -15 234 0 0 0 chr2 101433368 101433394 -149254460 + (TA)n Simple_repeat Simple_repeat 2 27 0 723 151 17 0 chr2 101433790 101433909 -149253945 + AluY SINE Alu 180 300 -11 305 250 10 48 chr2 101434311 101434410 -149253444 - HsTC2 DNA Tc2 -122 1776 1682 4587 122 50 67 chr2 101434410 101434695 -149253159 - Tigger1 DNA MER2_type 0 2418 2130 1699 167 3 28 chr2 101434695 101434982 -149252872 - AluSx SINE Alu -32 280 1 4587 122 50 67 chr2 101434982 101435576 -149252278 - Tigger1 DNA MER2_type -288 2130 1554 2128 128 0 0 chr2 101435577 101435859 -149251995 + AluSx SINE Alu 1 282 -30 261 0 0 0 chr2 101435860 101435889 -149251965 + (TA)n Simple_repeat Simple_repeat 1 29 0 212 222 12 58 chr2 101435996 101436167 -149251687 + C-rich Low_complexity Low_complexity 4 166 0 * 319 205 51 32 chr2 101436095 101436251 -149251603 + (CCCG)n Simple_repeat Simple_repeat 4 162 0 1856 88 0 17 chr2 101436457 101436695 -149251159 - AluSq SINE Alu -79 234 1 663 79 0 0 chr2 101437019 101437108 -149250746 - AluY SINE Alu -7 304 216 2205 105 33 10 chr2 101437246 101437550 -149250304 - AluSx SINE Alu -1 311 1 267 305 43 21 chr2 101437575 101437716 -149250138 - MIR SINE MIR -70 192 49 403 78 0 0 chr2 101438084 101438135 -149249719 + Alu SINE Alu 3 53 -258 1692 106 8 13 chr2 101438191 101438479 -149249375 + AluSq SINE Alu 65 313 0 649 218 26 0 chr2 101439113 101439269 -149248585 + MSTA LTR MaLR 1 160 -268 2319 73 13 7 chr2 101439461 101439761 -149248093 - AluY SINE Alu -9 302 1 2329 100 0 6 chr2 101439778 101440089 -149247765 - AluSg SINE Alu -1 309 1 2070 153 0 10 chr2 101440173 101440487 -149247367 + AluJb SINE Alu 1 311 -1 332 326 41 7 chr2 101441121 101441268 -149246586 - L2 LINE L2 -16 3297 3146 765 232 105 89 chr2 101441272 101441721 -149246133 - MLT1H LTR MaLR 0 549 94 1952 103 14 38 chr2 101442121 101442454 -149245400 - AluSq SINE Alu 0 326 1 1816 174 3 3 chr2 101442468 101442755 -149245099 - AluJo SINE Alu -25 287 1 500 262 16 43 chr2 101442967 101443272 -149244582 - AluSg SINE Alu -3 297 1 252 0 0 0 chr2 101443856 101443884 -149243970 + (TA)n Simple_repeat Simple_repeat 2 29 0 381 43 0 0 chr2 101443884 101443931 -149243923 + (CA)n Simple_repeat Simple_repeat 2 48 0 9789 128 19 18 chr2 101443952 101444673 -149243181 - Tigger1 DNA MER2_type -848 1570 851 2099 107 11 4 chr2 101444673 101444984 -149242870 - AluSq SINE Alu 0 313 1 9789 128 19 18 chr2 101444984 101445800 -149242054 - Tigger1 DNA MER2_type -1567 851 31 284 207 92 11 chr2 101445815 101445902 -149241952 - HsTC2 DNA Tc2 -224 1674 1581 * 356 100 0 0 chr2 101445875 101445925 -149241929 - HsTC2 DNA Tc2 -598 1300 1251 2407 92 3 0 chr2 101445937 101446240 -149241614 - AluSc SINE Alu -5 304 1 274 183 231 19 chr2 101446242 101446346 -149241508 - HsTC2 DNA Tc2 -1770 128 3 25 51 0 0 chr2 101446513 101446552 -149241302 + AT_rich Low_complexity Low_complexity 1 39 0 189 147 0 0 chr2 101446796 101446830 -149241024 + (CA)n Simple_repeat Simple_repeat 2 35 0 423 0 0 0 chr2 101447398 101447445 -149240409 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr2 101447447 101447467 -149240387 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1978 160 0 0 chr2 101447472 101447759 -149240095 - AluSx SINE Alu -25 287 1 616 165 0 87 chr2 101447770 101447801 -149240053 + MER8 DNA MER2_type 124 156 -83 2339 78 0 3 chr2 101447801 101448121 -149239733 - AluY SINE Alu 0 319 1 616 165 0 87 chr2 101448121 101448215 -149239639 + MER8 DNA MER2_type 156 239 0 372 151 164 14 chr2 101448215 101448287 -149239567 + MER119 DNA MER1_type 501 583 0 251 250 159 11 chr2 101448533 101448621 -149239233 + MIR SINE MIR 96 196 -66 239 154 0 19 chr2 101449896 101449948 -149237906 + GA-rich Low_complexity Low_complexity 3 53 0 2548 53 3 0 chr2 101450051 101450350 -149237504 - AluY SINE Alu -11 300 1 1784 172 3 7 chr2 101450400 101450685 -149237169 + AluJb SINE Alu 1 284 -28 376 73 0 0 chr2 101450685 101450740 -149237114 + (TAAA)n Simple_repeat Simple_repeat 2 116 0 2194 95 7 7 chr2 101450749 101451045 -149236809 + AluY SINE Alu 1 296 -15 279 0 0 0 chr2 101451217 101451248 -149236606 + (TA)n Simple_repeat Simple_repeat 2 32 0 255 250 0 0 chr2 101451248 101451312 -149236542 - L1MC4 LINE L1 -1339 6703 6640 436 195 71 0 chr2 101451343 101451456 -149236398 - L1M4 LINE L1 -875 5271 5151 1895 138 11 0 chr2 101451464 101451747 -149236107 - AluSx SINE Alu -26 286 1 290 128 0 0 chr2 101451787 101451826 -149236028 - 5S rRNA rRNA -82 39 1 968 203 0 14 chr2 101451826 101452033 -149235821 - L1M4 LINE L1 -1005 5141 4938 1411 85 0 5 chr2 101452034 101452222 -149235632 - AluSg SINE Alu -123 187 1 4466 161 48 33 chr2 101452229 101452629 -149235225 + L1MB7 LINE L1 5274 5667 -517 2230 88 3 0 chr2 101452629 101452926 -149234928 - AluSx SINE Alu -14 298 1 4466 161 48 33 chr2 101452926 101453422 -149234432 + L1MB7 LINE L1 5667 6183 -1 2161 144 80 3 chr2 101453530 101453898 -149233956 - MSTA LTR MaLR 0 428 39 315 203 56 15 chr2 101453883 101453973 -149233881 - LTR50 LTR ERVL -133 635 299 * 4382 185 29 32 chr2 101454443 101454731 -149233123 - L1MC3 LINE L1 -932 6853 6566 2120 104 3 3 chr2 101454731 101455028 -149232826 + AluSx SINE Alu 1 297 -15 4382 185 29 32 chr2 101455028 101455670 -149232184 - L1MC3 LINE L1 -1219 6566 5926 2500 120 55 43 chr2 101455670 101455970 -149231884 - MSTB1 LTR MaLR 0 432 124 2786 116 14 36 chr2 101455970 101456408 -149231446 - MSTA LTR MaLR 0 428 1 2500 120 55 43 chr2 101456408 101456524 -149231330 - MSTB1 LTR MaLR -308 124 11 1398 167 69 0 chr2 101456528 101456804 -149231050 - L1MC3 LINE L1 -1886 5899 5605 314 279 79 29 chr2 101456806 101456946 -149230908 - L1MEc LINE L1 -3979 2405 2259 2091 102 3 7 chr2 101457281 101457575 -149230279 - AluSq SINE Alu -19 294 2 309 289 127 50 chr2 101457581 101458000 -149229854 - L1MEc LINE L1 -4677 1886 1436 2092 95 17 10 chr2 101458077 101458372 -149229482 - AluSx SINE Alu -15 297 1 298 318 62 52 chr2 101458553 101458858 -149228996 - L1MEc LINE L1 -5250 1122 815 726 170 14 7 chr2 101459088 101459235 -149228619 - AluY SINE Alu -162 149 2 474 284 68 68 chr2 101460103 101460424 -149227430 + LTR16C LTR ERVL 79 404 -87 1743 158 0 11 chr2 101460424 101460738 -149227116 - AluSx SINE Alu 0 311 1 474 284 68 68 chr2 101460738 101460826 -149227028 + LTR16C LTR ERVL 403 490 -1 2008 144 0 0 chr2 101460909 101461214 -149226640 - AluSx SINE Alu -6 306 2 4223 178 51 61 chr2 101461251 101461817 -149226037 - L1MC3 LINE L1 -2 7783 7213 1840 144 7 0 chr2 101461817 101462116 -149225738 + AluSx SINE Alu 1 301 -11 4223 178 51 61 chr2 101462116 101462262 -149225592 - L1MC3 LINE L1 -572 7213 7067 198 0 0 0 chr2 101462262 101462284 -149225570 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 4223 178 51 61 chr2 101462284 101462303 -149225551 - L1MC3 LINE L1 -718 7067 7049 225 0 0 0 chr2 101462303 101462328 -149225526 + (TG)n Simple_repeat Simple_repeat 2 26 0 4223 178 51 61 chr2 101462328 101462342 -149225512 - L1MC3 LINE L1 -736 7049 7036 218 54 0 27 chr2 101462342 101462379 -149225475 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1966 106 7 0 chr2 101462383 101462658 -149225196 - AluSq SINE Alu -35 278 2 4223 178 51 61 chr2 101462658 101462959 -149224895 - L1MC3 LINE L1 -752 7033 6739 1472 126 160 19 chr2 101464422 101464684 -149223170 + AluSg SINE Alu 1 299 -1 541 300 58 76 chr2 101464691 101464765 -149223089 + HAL1b LINE L1 1000 1074 -274 601 195 51 0 chr2 101464765 101464883 -149222971 - FLAM_A SINE Alu -9 124 1 541 300 58 76 chr2 101464883 101465138 -149222716 + HAL1b LINE L1 1074 1323 -25 232 350 124 0 chr2 101465753 101465850 -149222004 - MIR SINE MIR -62 146 38 205 336 106 9 chr2 101466009 101466122 -149221732 + MIR SINE MIR 28 151 -111 1839 135 3 25 chr2 101466899 101467218 -149220636 + AluSx SINE Alu 1 312 0 693 276 107 17 chr2 101467285 101467575 -149220279 - MLT1G LTR MaLR -229 361 46 295 227 8 26 chr2 101468538 101468645 -149219209 - HAL1b LINE L1 -60 1288 1186 230 204 19 0 chr2 101468888 101468942 -149218912 - LTR66 LTR ERVL -171 439 385 230 226 16 32 chr2 101468989 101469051 -149218803 - L1MC/D LINE L1 -2148 5660 5600 1798 100 14 28 chr2 101469053 101469217 -149218637 - AluSx SINE Alu -16 296 136 2433 77 0 0 chr2 101469217 101469528 -149218326 - AluY SINE Alu 0 311 1 1798 100 14 28 chr2 101469528 101469653 -149218201 - AluSx SINE Alu -176 136 11 31 0 0 0 chr2 101469802 101469833 -149218021 + AT_rich Low_complexity Low_complexity 1 31 0 1981 113 11 0 chr2 101469833 101470116 -149217738 - AluSx SINE Alu -24 288 3 320 339 91 16 chr2 101471254 101471440 -149216414 - MIR SINE MIR -14 248 49 2032 114 7 0 chr2 101471782 101472111 -149215743 + AluSq SINE Alu 1 331 0 380 281 176 17 chr2 101472675 101472977 -149214877 + L2 LINE L2 2921 3270 -2 2213 90 3 22 chr2 101473031 101473343 -149214511 + AluSq SINE Alu 1 306 -7 633 161 9 0 chr2 101473400 101473512 -149214342 - MER41B LTR ERV1 -521 114 2 532 212 60 40 chr2 101473864 101474015 -149213839 - MER5B DNA MER1_type -20 158 5 384 173 0 53 chr2 101474277 101474352 -149213502 + L2 LINE L2 3220 3290 -23 1857 75 49 8 chr2 101474423 101474710 -149213144 - AluSx SINE Alu 0 301 4 28 48 0 0 chr2 101475674 101475716 -149212138 + AT_rich Low_complexity Low_complexity 1 42 0 1329 136 183 4 chr2 101475966 101476217 -149211637 - AluJb SINE Alu -6 296 1 182 107 0 0 chr2 101476295 101476323 -149211531 + L2 LINE L2 3041 3068 -245 2182 78 0 0 chr2 101476336 101476646 -149211208 - AluY SINE Alu 0 310 1 821 142 57 7 chr2 101477266 101477407 -149210447 - AluSx SINE Alu -147 165 18 2335 63 0 3 chr2 101477429 101477728 -149210126 - AluY SINE Alu -13 298 1 221 303 107 39 chr2 101477869 101478047 -149209807 + L2 LINE L2 3120 3309 -4 2262 63 0 0 chr2 101478072 101478356 -149209498 - AluY SINE Alu -26 285 2 197 167 104 0 chr2 101478358 101478406 -149209448 - L3 LINE CR1 -913 664 612 225 353 36 14 chr2 101478853 101478992 -149208862 + MIR3 SINE MIR 39 180 -28 416 241 27 45 chr2 101479257 101479369 -149208485 + MER5A DNA MER1_type 80 189 0 471 320 127 23 chr2 101479441 101479700 -149208154 - L2 LINE L2 -8 3264 2979 318 239 30 0 chr2 101479904 101479971 -149207883 - L2 LINE L2 -526 2788 2720 2060 111 27 0 chr2 101479971 101480269 -149207585 - AluSx SINE Alu -6 306 1 839 269 36 5 chr2 101480272 101480495 -149207359 - L2 LINE L2 -966 2348 2119 542 98 98 22 chr2 101480516 101480608 -149207246 + AluSq/x SINE Alu 5 103 -210 579 124 11 11 chr2 101480708 101480797 -149207057 - AluSg1 SINE Alu -219 90 2 1904 113 41 3 chr2 101480842 101481134 -149206720 + AluSx SINE Alu 1 303 -9 731 263 118 18 chr2 101482379 101482607 -149205247 + MER69 DNA AcHobo 256 506 -720 245 190 103 0 chr2 101482622 101482680 -149205174 + MER69 DNA AcHobo 2413 2476 -50 2665 139 24 5 chr2 101482683 101483107 -149204747 - MSTB1 LTR MaLR 0 432 1 303 304 48 48 chr2 101483167 101483292 -149204562 - L1MC4a LINE L1 -1735 6073 5949 2122 114 0 3 chr2 101483302 101483609 -149204245 - AluSx SINE Alu -6 306 1 231 210 74 25 chr2 101483609 101483681 -149204173 - L1MC4a LINE L1 -1842 5966 5888 387 302 160 38 chr2 101483813 101484558 -149203296 - L1M4 LINE L1 -1158 4988 4153 2466 71 0 0 chr2 101484692 101485003 -149202851 + AluY SINE Alu 1 311 0 1680 138 130 45 chr2 101485003 101485379 -149202475 - LOR1b LTR ERV1 -53 408 1 298 105 0 0 chr2 101485446 101485484 -149202370 + AluSg SINE Alu 1 38 -264 1614 114 76 0 chr2 101485485 101485748 -149202106 + AluSg SINE Alu 13 295 -15 683 188 8 12 chr2 101486333 101486599 -149201255 + CT-rich Low_complexity Low_complexity 1 264 0 1997 121 0 0 chr2 101486601 101486881 -149200973 - AluSx SINE Alu -32 280 1 338 339 42 0 chr2 101486881 101486999 -149200855 + L2 LINE L2 2613 2735 -579 692 203 16 61 chr2 101487516 101487762 -149200092 + ORSL DNA AcHobo 13 247 -28 1932 117 0 28 chr2 101488633 101488916 -149198938 + AluSx SINE Alu 1 275 -37 204 40 0 0 chr2 101488919 101488944 -149198910 + (TC)n Simple_repeat Simple_repeat 2 26 0 336 48 0 0 chr2 101488946 101488988 -149198866 + (CA)n Simple_repeat Simple_repeat 1 42 0 2234 72 0 26 chr2 101489995 101490300 -149197554 - AluY SINE Alu -14 297 1 467 83 28 0 chr2 101490490 101490562 -149197292 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 1824 127 31 7 chr2 101490655 101490947 -149196907 - AluSq SINE Alu -14 299 1 5894 103 3 14 chr2 101490953 101491809 -149196045 - L1PB1 LINE L1 0 6151 5305 225 297 14 40 chr2 101492137 101492211 -149195643 - L2 LINE L2 0 3272 3201 261 0 0 0 chr2 101493535 101493564 -149194290 + (CA)n Simple_repeat Simple_repeat 1 29 0 432 0 0 0 chr2 101494115 101494163 -149193691 + (CA)n Simple_repeat Simple_repeat 1 48 0 1863 110 76 3 chr2 101495032 101495322 -149192532 - AluSq SINE Alu -2 311 1 2872 137 12 0 chr2 101495445 101495868 -149191986 + MSTA LTR MaLR 1 428 0 417 320 148 15 chr2 101496156 101496487 -149191367 - MLT1J1 LTR MaLR -1 445 71 1877 170 9 30 chr2 101496586 101496617 -149191237 - MLT1A1 LTR MaLR -37 328 298 2154 105 7 0 chr2 101496617 101496912 -149190942 + AluSq SINE Alu 1 297 -16 1877 170 9 30 chr2 101496912 101497215 -149190639 - MLT1A1 LTR MaLR -67 298 1 462 331 29 0 chr2 101497220 101497359 -149190495 - MIR SINE MIR -113 149 7 300 263 128 67 chr2 101498502 101498681 -149189173 + L1ME1 LINE L1 5704 5893 -273 318 132 0 0 chr2 101498702 101498755 -149189099 + (TG)n Simple_repeat Simple_repeat 2 54 0 211 229 83 0 chr2 101498787 101498835 -149189019 - L2 LINE L2 -52 3261 3210 1091 312 106 22 chr2 101498899 101499421 -149188433 - L2 LINE L2 -529 2785 2177 1455 140 38 0 chr2 101499421 101499656 -149188198 - L1PA16 LINE L1 -9 6157 5914 1091 312 106 22 chr2 101499656 101499898 -149187956 - L2 LINE L2 -1137 2177 1957 282 95 0 0 chr2 101500621 101500663 -149187191 + (CA)n Simple_repeat Simple_repeat 2 43 0 256 317 12 12 chr2 101501383 101501465 -149186389 - L3 LINE CR1 -15 1562 1481 407 135 0 14 chr2 101502640 101502714 -149185140 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 1305 125 15 5 chr2 101502814 101503014 -149184840 + AluSq SINE Alu 96 297 -16 251 121 0 0 chr2 101503098 101503131 -149184723 - Alu SINE Alu -267 33 1 202 139 23 0 chr2 101503411 101503454 -149184400 + T-rich Low_complexity Low_complexity 3 46 0 1379 170 131 0 chr2 101503475 101503734 -149184120 + AluSx SINE Alu 1 293 -19 2252 75 0 14 chr2 101504191 101504484 -149183370 + AluY SINE Alu 1 289 -22 2085 121 3 0 chr2 101504837 101505142 -149182712 - AluSg SINE Alu -4 306 1 702 166 14 65 chr2 101505356 101505495 -149182359 + AluJo/FLAM SINE Alu 2 133 -169 257 179 0 0 chr2 101505495 101505534 -149182320 + AluSg/x SINE Alu 128 166 -134 948 66 16 0 chr2 101505534 101505655 -149182199 - AluSq SINE Alu -132 181 59 471 111 0 0 chr2 101505655 101505718 -149182136 - AluSg1 SINE Alu -214 95 33 406 158 248 40 chr2 101505715 101505816 -149182038 + AluJb SINE Alu 169 290 -22 * 2024 120 3 0 chr2 101506586 101506877 -149180977 - AluSx SINE Alu -20 292 1 2207 90 3 7 chr2 101506883 101507184 -149180670 - AluSp SINE Alu -13 300 1 30 0 0 0 chr2 101507187 101507217 -149180637 + AT_rich Low_complexity Low_complexity 1 30 0 2082 121 0 0 chr2 101507243 101507548 -149180306 - AluSg SINE Alu -5 305 1 2184 88 14 3 chr2 101507756 101508053 -149179801 + AluSq SINE Alu 1 300 -13 215 241 0 0 chr2 101508318 101508372 -149179482 + (TA)n Simple_repeat Simple_repeat 1 54 0 1840 133 7 23 chr2 101508372 101508673 -149179181 - AluSx SINE Alu -16 296 1 1621 156 65 6 chr2 101508814 101509153 -149178701 - L1MA9 LINE L1 0 6312 5954 1517 174 21 3 chr2 101509186 101509468 -149178386 + AluJo SINE Alu 3 289 -23 2314 58 7 0 chr2 101509507 101509799 -149178055 - AluY SINE Alu -17 294 1 1457 147 11 147 chr2 101510259 101510606 -149177248 - AluJo SINE Alu -2 300 1 1909 139 3 17 chr2 101511449 101511750 -149176104 - AluSx SINE Alu -15 297 1 295 236 157 0 chr2 101511833 101511922 -149175932 + U13 snRNA snRNA 2 104 0 810 162 0 22 chr2 101512202 101512338 -149175516 - FLAM_C SINE Alu 0 133 1 446 222 104 0 chr2 101513057 101513201 -149174653 - AluSc SINE Alu -12 297 139 453 238 0 60 chr2 101513217 101513402 -149174452 + C-rich Low_complexity Low_complexity 4 177 0 1016 68 0 8 chr2 101513564 101513696 -149174158 - AluY SINE Alu -180 131 1 2013 115 20 0 chr2 101513792 101514087 -149173767 + AluSq SINE Alu 1 301 -12 351 231 273 70 chr2 101514311 101514696 -149173158 + MLT1J LTR MaLR 1 463 -48 344 322 79 40 chr2 101514873 101515050 -149172804 + L1MEd LINE L1 2 185 -5934 356 280 47 105 chr2 101515241 101515376 -149172478 + L1MEd LINE L1 435 549 -5570 2047 77 88 0 chr2 101515376 101515661 -149172193 + AluSq SINE Alu 1 310 -3 356 280 47 105 chr2 101515661 101515782 -149172072 + L1MEd LINE L1 549 676 -5443 1966 110 0 7 chr2 101515783 101516064 -149171790 + AluY SINE Alu 1 279 -32 1823 60 9 0 chr2 101516083 101516315 -149171539 + AluY SINE Alu 1 234 -77 2084 139 80 14 chr2 101516683 101516966 -149170888 + MSTA LTR MaLR 54 366 -62 2014 110 6 46 chr2 101516966 101517292 -149170562 - AluSq SINE Alu 0 313 1 2084 139 80 14 chr2 101517292 101517360 -149170494 + MSTA LTR MaLR 366 428 0 2537 142 108 85 chr2 101518807 101518975 -149168879 - MER4A LTR ERV1 -1 663 500 1913 127 0 3 chr2 101518975 101519266 -149168588 - AluSg SINE Alu -20 290 1 2537 142 108 85 chr2 101519266 101519745 -149168109 - MER4A LTR ERV1 -164 500 1 2052 122 10 0 chr2 101520378 101520682 -149167172 - AluSq SINE Alu 0 313 7 2399 120 37 0 chr2 101521790 101522166 -149165688 + MLT1B LTR MaLR 1 390 0 802 183 0 0 chr2 101522920 101523051 -149164803 - AluJb SINE Alu -48 264 134 2160 106 0 0 chr2 101523333 101523635 -149164219 - AluY SINE Alu -9 302 1 2283 110 15 54 chr2 101523702 101523931 -149163923 - THE1C LTR MaLR 0 375 166 2221 53 0 72 chr2 101523931 101524251 -149163603 + AluY SINE Alu 12 308 -3 2283 110 15 54 chr2 101524251 101524411 -149163443 - THE1C LTR MaLR -209 166 1 207 200 0 0 chr2 101525103 101525138 -149162716 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 553 26 0 26 chr2 101525272 101525349 -149162505 + (TTTCC)n Simple_repeat Simple_repeat 3 77 0 1993 129 0 0 chr2 101525349 101525635 -149162219 - AluSx SINE Alu -26 286 1 409 248 0 0 chr2 101525635 101525744 -149162110 - L1M4 LINE L1 -834 5312 5204 1907 113 15 0 chr2 101525770 101526075 -149161779 + AluSx SINE Alu 15 323 0 541 161 0 0 chr2 101526178 101526265 -149161589 - MER4B LTR ERV1 -523 87 1 499 151 23 0 chr2 101526267 101526353 -149161501 - MER21A LTR ERV1 -98 833 746 838 73 37 0 chr2 101526354 101526463 -149161391 - MER4E LTR ERV1 0 779 667 317 213 0 16 chr2 101526718 101526779 -149161075 - AluJ/FLAM SINE Alu -242 60 1 310 266 16 0 chr2 101526907 101526971 -149160883 + L1MEd LINE L1 751 815 -5304 1913 106 22 0 chr2 101526971 101527273 -149160581 + AluSg SINE Alu 1 308 0 1146 102 13 0 chr2 101527275 101527432 -149160422 + AluSg/x SINE Alu 128 286 -24 2013 125 3 0 chr2 101527512 101527815 -149160039 + AluSg SINE Alu 2 305 -5 3927 116 46 19 chr2 101527833 101528368 -149159486 - LTR9B LTR ERV1 0 644 88 1985 108 3 3 chr2 101528368 101528663 -149159191 + AluSx SINE Alu 1 295 -17 3927 116 46 19 chr2 101528663 101528754 -149159100 - LTR9B LTR ERV1 -556 88 1 1139 110 0 0 chr2 101529133 101529288 -149158566 + AluSg SINE Alu 6 160 -150 42 20 0 0 chr2 101529321 101529370 -149158484 + AT_rich Low_complexity Low_complexity 1 49 0 866 231 0 0 chr2 101530093 101530248 -149157606 - LTR39 LTR ERV1 -7 776 622 3329 178 39 63 chr2 101530248 101530605 -149157249 - MER4E LTR ERV1 0 779 415 2261 81 3 0 chr2 101530605 101530900 -149156954 + AluY SINE Alu 1 296 -15 3329 178 39 63 chr2 101530900 101531065 -149156789 - MER4E LTR ERV1 -364 415 248 1937 130 27 0 chr2 101531065 101531364 -149156490 + AluJb SINE Alu 5 311 -1 3329 178 39 63 chr2 101531364 101531488 -149156366 - MER4E LTR ERV1 -531 248 152 4442 115 7 60 chr2 101531488 101532218 -149155636 - LTR8 LTR ERV1 0 691 1 3329 178 39 63 chr2 101532218 101532367 -149155487 - MER4E LTR ERV1 -627 152 1 1248 139 5 28 chr2 101532367 101532578 -149155276 - LTR39 LTR ERV1 -158 625 420 866 87 9 0 chr2 101532578 101532693 -149155161 + FLAM_C SINE Alu 1 116 -17 2698 126 13 58 chr2 101532730 101533022 -149154832 - LTR39 LTR ERV1 -352 431 164 2024 127 7 0 chr2 101533022 101533321 -149154533 - AluSx SINE Alu -11 301 1 2698 126 13 58 chr2 101533321 101533479 -149154375 - LTR39 LTR ERV1 -619 164 1 240 258 23 62 chr2 101533664 101533792 -149154062 - MER41A LTR ERV1 -40 514 392 * 2118 197 88 33 chr2 101533773 101534295 -149153559 - LTR60 LTR ERV1 -32 554 4 2033 103 10 7 chr2 101534782 101535074 -149152780 - AluSx SINE Alu -19 293 1 282 294 109 0 chr2 101535304 101535423 -149152431 + MIR SINE MIR 71 202 -60 1667 132 30 1 chr2 101535683 101536075 -149151779 - LTR56 LTR ERV1 -2 443 9 1553 153 96 3 chr2 101536077 101536359 -149151495 - AluJo SINE Alu 0 312 5 2050 105 41 0 chr2 101536428 101536722 -149151132 - AluSx SINE Alu -6 306 1 2111 112 0 7 chr2 101537781 101538086 -149149768 + AluSx SINE Alu 1 303 -9 2632 288 115 21 chr2 101538344 101538641 -149149213 - L2 LINE L2 -803 2511 2243 1488 53 10 67 chr2 101538641 101538850 -149149004 + MER107 DNA MER1_type 1 197 0 2632 288 115 21 chr2 101538850 101539404 -149148450 - L2 LINE L2 -1071 2243 1742 2118 102 3 3 chr2 101539404 101539697 -149148157 + AluSc SINE Alu 1 293 -16 1723 55 0 50 chr2 101539697 101539934 -149147920 + AluY SINE Alu 74 299 -12 2632 288 115 21 chr2 101539934 101540306 -149147548 - L2 LINE L2 -1571 1743 1171 337 218 16 89 chr2 101540306 101540430 -149147424 + MER20B DNA MER1_type 35 149 -634 353 319 34 0 chr2 101591695 101591814 -149096040 - MER5A DNA MER1_type -4 185 63 189 191 24 0 chr2 101592775 101592817 -149095037 - MER5B DNA MER1_type -135 43 1 24 32 0 0 chr2 101593516 101593547 -149094307 + AT_rich Low_complexity Low_complexity 1 31 0 872 281 16 8 chr2 101594200 101594446 -149093408 - MIR SINE MIR -12 250 3 2604 66 0 0 chr2 101594680 101594982 -149092872 - AluSp SINE Alu -11 302 1 336 194 0 32 chr2 101595406 101595468 -149092386 - MLT1J LTR MaLR -336 175 116 1676 233 101 14 chr2 101595490 101596065 -149091789 - L1M4 LINE L1 -1226 4920 4296 1463 195 41 23 chr2 101596075 101596438 -149091416 + MLT1B LTR MaLR 6 390 0 2111 222 16 16 chr2 101596460 101597010 -149090844 - L1M4 LINE L1 -1888 4258 3709 1276 156 16 0 chr2 101597010 101597202 -149090652 + AluJb SINE Alu 86 280 -32 218 32 32 0 chr2 101597202 101597233 -149090621 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1195 248 82 5 chr2 101597235 101597626 -149090228 - L1M4 LINE L1 -2430 3716 3296 6091 78 26 0 chr2 101597691 101598496 -149089358 + L1PA10 LINE L1 5341 6166 -2 27 49 0 0 chr2 101598515 101598556 -149089298 + AT_rich Low_complexity Low_complexity 1 41 0 376 254 57 40 chr2 101599066 101599243 -149088611 + MER5A DNA MER1_type 1 180 -9 4062 95 2 2 chr2 101599354 101599902 -149087952 - L1PA8 LINE L1 -8 6164 5617 25 0 0 0 chr2 101599912 101599937 -149087917 + AT_rich Low_complexity Low_complexity 1 25 0 1014 219 141 91 chr2 101600001 101600518 -149087336 + MLT1H LTR MaLR 1 543 -6 208 292 0 0 chr2 101602694 101602742 -149085112 - L2 LINE L2 -23 3290 3243 705 230 134 47 chr2 101604022 101604365 -149083489 - MER93b LTR ERV1 0 373 1 228 130 0 0 chr2 101604479 101604525 -149083329 + (TG)n Simple_repeat Simple_repeat 1 46 0 337 211 118 53 chr2 101604653 101604821 -149083033 - MLT1G3 LTR MaLR -175 380 155 2134 129 3 0 chr2 101605218 101605512 -149082342 - AluSx SINE Alu -17 295 1 1614 180 53 54 chr2 101605860 101606338 -149081516 + MER1B DNA MER1_type 1 324 -5 627 246 30 25 chr2 101606570 101606773 -149081081 - L1MC5 LINE L1 -48 7913 7710 * 829 260 16 30 chr2 101606761 101607087 -149080767 + L1ME1 LINE L1 5849 6332 -2 478 168 84 0 chr2 101607120 101607227 -149080627 - AluSp/q SINE Alu -9 304 189 689 80 0 120 chr2 101607227 101607352 -149080502 + AluY SINE Alu 194 303 -8 1295 120 5 39 chr2 101607352 101607560 -149080294 - AluSx SINE Alu -111 201 1 279 266 152 38 chr2 101607643 101607906 -149079948 - L1M4 LINE L1 -3117 3029 2737 2727 126 71 21 chr2 101608316 101608807 -149079047 + MLT2A1 LTR ERVL 1 513 -2 1238 40 0 7 chr2 101608809 101608960 -149078894 + HERVL-A1 LTR ERVL 1 150 -5504 1064 291 57 51 chr2 101609538 101610281 -149077573 + L1MEc LINE L1 1071 1817 -4579 825 175 0 0 chr2 101610288 101610425 -149077429 + FLAM_C SINE Alu 1 137 -6 528 172 132 35 chr2 101610428 101610602 -149077252 + L1MEc LINE L1 1823 2013 -4383 934 148 39 7 chr2 101610605 101610760 -149077094 - FRAM SINE Alu -16 160 1 525 175 92 52 chr2 101610761 101611012 -149076842 + L1MEc LINE L1 2003 2263 -4133 831 198 41 30 chr2 101611023 101611074 -149076780 - MER3 DNA MER1_type -5 204 155 1560 167 91 7 chr2 101611074 101611361 -149076493 + AluJb SINE Alu 1 311 -1 831 198 41 30 chr2 101611361 101611506 -149076348 - MER3 DNA MER1_type -54 155 6 770 249 36 42 chr2 101611514 101611844 -149076010 + L1MEc LINE L1 2231 2558 -3657 1860 251 51 11 chr2 101611848 101612395 -149075459 + L1ME1 LINE L1 70 638 -5758 332 191 79 11 chr2 101612395 101612484 -149075370 + L1MA10 LINE L1 6228 6322 -12 * 2843 245 64 21 chr2 101612464 101613480 -149074374 + L1ME1 LINE L1 3377 4436 -1779 1054 160 0 0 chr2 101613483 101613639 -149074215 + FRAM SINE Alu 1 156 -20 3117 221 32 53 chr2 101613640 101614612 -149073242 + L1ME1 LINE L1 4431 5387 -844 2179 119 7 7 chr2 101614612 101614914 -149072940 + AluSx SINE Alu 1 302 -10 3117 221 32 53 chr2 101614914 101615076 -149072778 + L1ME1 LINE L1 5387 5551 -680 1026 246 121 69 chr2 101615112 101615616 -149072238 + MLT1F1 LTR MaLR 34 563 -4 2563 232 33 14 chr2 101615620 101616262 -149071592 + L1ME1 LINE L1 5577 6230 -5 5054 159 34 26 chr2 101616270 101616785 -149071069 + L1MB1 LINE L1 4982 5492 -676 180 111 0 0 chr2 101616785 101616812 -149071042 + (CCCCCA)n Simple_repeat Simple_repeat 2 28 0 5054 159 34 26 chr2 101616812 101617475 -149070379 + L1MB1 LINE L1 5492 6162 -6 364 357 23 0 chr2 101617630 101617759 -149070095 + L2 LINE L2 3140 3271 -1 2151 117 7 0 chr2 101618691 101618981 -149068873 + AluSx SINE Alu 1 292 -20 331 300 0 23 chr2 101619912 101620042 -149067812 + MER5B DNA MER1_type 52 178 0 436 292 81 0 chr2 101620729 101620890 -149066964 + MER5B DNA MER1_type 5 178 0 191 289 13 26 chr2 101620892 101620968 -149066886 - MER5B DNA MER1_type -99 79 5 243 356 0 10 chr2 101621014 101621118 -149066736 - MIR SINE MIR 0 262 160 423 233 20 27 chr2 101621123 101621325 -149066529 - MIR SINE MIR 0 262 13 1682 186 30 33 chr2 101621993 101622359 -149065495 - MLT1A1 LTR MaLR 0 365 1 642 286 112 19 chr2 101622367 101622689 -149065165 + MLT1K LTR MaLR 228 579 -9 443 216 142 15 chr2 101622725 101622859 -149064995 + MIR SINE MIR 101 251 -11 279 268 98 85 chr2 101624010 101624327 -149063527 - MLT1L LTR MaLR -100 515 195 255 172 17 52 chr2 101624315 101624373 -149063481 - LTR67 LTR ERVL -410 147 92 * 1923 88 35 23 chr2 101624587 101624847 -149063007 + AluSg SINE Alu 16 278 -32 441 0 0 0 chr2 101624849 101624898 -149062956 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 406 335 0 6 chr2 101624908 101625069 -149062785 - MER5A DNA MER1_type -29 160 1 2225 125 3 0 chr2 101625632 101625936 -149061918 + AluSx SINE Alu 1 305 -7 277 277 59 0 chr2 101626000 101626101 -149061753 - MIR SINE MIR -91 171 65 251 297 74 17 chr2 101627114 101627289 -149060565 - MIR SINE MIR -72 190 6 197 329 15 44 chr2 101627395 101627532 -149060322 + MIR SINE MIR 17 149 -59 731 315 92 41 chr2 101627554 101628447 -149059407 + L1MEc LINE L1 51 988 -5408 3166 258 87 39 chr2 101628497 101629457 -149058397 + L1MEc LINE L1 1100 2012 -4203 6429 128 12 15 chr2 101629457 101630429 -149057425 + LTR5 LTR ERVK 1 969 0 3166 258 87 39 chr2 101630429 101631734 -149056120 + L1MEc LINE L1 2012 3764 -2451 273 172 52 0 chr2 101631735 101631793 -149056061 - MER50 LTR ERV1 -102 632 572 1138 176 36 12 chr2 101631852 101632155 -149055699 + MLT1A1 LTR MaLR 2 365 0 3149 259 70 14 chr2 101632159 101633626 -149054228 - L1PB1 LINE L1 -193 5971 4408 1222 104 0 16 chr2 101633631 101633814 -149054040 + L1PB1 LINE L1 5971 6150 -1 22 0 0 0 chr2 101633852 101633874 -149053980 + AT_rich Low_complexity Low_complexity 1 22 0 694 168 32 0 chr2 101634968 101635121 -149052733 - MIR SINE MIR -2 260 103 489 47 0 0 chr2 101635451 101635515 -149052339 + (TC)n Simple_repeat Simple_repeat 1 64 0 308 297 40 10 chr2 101636184 101636285 -149051569 + L2 LINE L2 3163 3266 -6 414 306 13 25 chr2 101636328 101636485 -149051369 - MIR SINE MIR -101 161 7 251 304 18 18 chr2 101636636 101636748 -149051106 + MIR SINE MIR 18 129 -79 274 307 35 18 chr2 101636948 101637062 -149050792 - MIR SINE MIR -133 129 14 2225 256 63 89 chr2 101637334 101638324 -149049530 + L1M4b LINE L1 22 1224 -5635 240 255 39 0 chr2 101638509 101638560 -149049294 + L1M4b LINE L1 1173 1225 -5634 1304 201 9 115 chr2 101638772 101639225 -149048629 + L1M4b LINE L1 1210 1614 -5245 2188 174 77 0 chr2 101639303 101639695 -149048159 - MSTB LTR MaLR 0 426 5 2045 49 0 0 chr2 101639695 101639941 -149047913 - L1PA5 LINE L1 -2 6152 5907 1482 227 52 14 chr2 101640282 101640626 -149047228 - MER4D LTR ERV1 0 903 547 360 183 0 10 chr2 101640625 101640701 -149047153 - MER4E LTR ERV1 -589 283 100 * 2088 115 18 0 chr2 101640726 101641005 -149046849 + AluSx SINE Alu 6 289 -23 1678 149 11 11 chr2 101641041 101641322 -149046532 - MER49 LTR ERV1 -642 281 1 2072 237 39 53 chr2 101641355 101641634 -149046220 + L1M4b LINE L1 1600 1881 -5078 2384 105 3 0 chr2 101641634 101641939 -149045915 + AluSx SINE Alu 1 306 -6 2072 237 39 53 chr2 101641939 101642457 -149045397 + L1M4b LINE L1 1881 2386 -4573 230 268 49 57 chr2 101642658 101642781 -149045073 + L1M4b LINE L1 2475 2596 -4542 * 2843 213 30 40 chr2 101642775 101643595 -149044259 + L1M4b LINE L1 3044 3855 -3102 2104 142 24 0 chr2 101643595 101643925 -149043929 + MER57A LTR ERV1 1 338 -65 1805 180 30 41 chr2 101644501 101644895 -149042959 + MLT1B LTR MaLR 1 390 0 315 49 0 0 chr2 101645847 101645888 -149041966 + (TCC)n Simple_repeat Simple_repeat 1 41 0 195 304 52 78 chr2 101646946 101647061 -149040793 + L2 LINE L2 2266 2377 -937 2546 144 24 5 chr2 101647268 101647692 -149040162 + MSTB1 LTR MaLR 1 432 0 290 338 30 55 chr2 101649018 101649255 -149038599 + MIR SINE MIR 30 260 -2 566 298 30 34 chr2 101649480 101649742 -149038112 + MLT1K LTR MaLR 328 588 0 277 289 40 0 chr2 101649807 101649913 -149037941 - MER5A DNA MER1_type -9 169 59 407 268 10 0 chr2 101650396 101650493 -149037361 + MER81 DNA DNA 17 114 0 312 254 103 24 chr2 101650957 101651083 -149036771 + MIR SINE MIR 13 148 -114 2266 191 22 75 chr2 101651299 101651884 -149035970 - MLT2B3 LTR ERVL 0 554 1 417 249 83 30 chr2 101651996 101652165 -149035689 + L1ME4a LINE L1 5574 5751 -370 318 257 186 0 chr2 101652204 101652317 -149035537 + MIR SINE MIR 16 149 -113 2262 110 7 3 chr2 101652546 101652855 -149034999 + AluSg SINE Alu 1 310 0 231 264 99 33 chr2 101652867 101652958 -149034896 + L1ME4a LINE L1 5997 6093 -28 760 143 0 45 chr2 101652967 101653087 -149034767 + FLAM_C SINE Alu 1 116 -196 226 0 0 56 chr2 101653087 101653123 -149034731 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 760 143 0 45 chr2 101653123 101653135 -149034719 + FLAM_C SINE Alu 116 127 -185 2459 195 75 75 chr2 101653974 101654777 -149033077 + L1MDb LINE L1 243 1168 -5241 1555 150 20 0 chr2 101654786 101655040 -149032814 + L1MA8 LINE L1 5997 6255 -36 237 65 0 0 chr2 101655040 101655071 -149032783 + (TA)n Simple_repeat Simple_repeat 2 32 0 360 94 0 0 chr2 101655091 101655144 -149032710 + (GGAA)n Simple_repeat Simple_repeat 2 54 0 4035 208 113 20 chr2 101655144 101656381 -149031473 + L1MDb LINE L1 1162 2513 -3893 263 318 47 0 chr2 101656388 101656473 -149031381 - MIR SINE MIR -78 130 42 272 238 0 32 chr2 101656911 101656974 -149030880 + MLT2E LTR ERVL 40 100 -528 2417 69 0 0 chr2 101657114 101657417 -149030437 - AluY SINE Alu -8 303 1 403 250 94 39 chr2 101657626 101657738 -149030116 + MLT1I LTR MaLR 21 148 -261 2144 109 0 0 chr2 101657738 101658031 -149029823 - AluSg1 SINE Alu -16 293 1 403 250 94 39 chr2 101658031 101658098 -149029756 + MLT1I LTR MaLR 148 210 -199 301 298 97 18 chr2 101658125 101658239 -149029615 + MLT1I LTR MaLR 285 407 -2 247 330 130 0 chr2 101658481 101658581 -149029273 - L2 LINE L2 -1 3312 3200 682 317 21 8 chr2 101658641 101658881 -149028973 - MIR SINE MIR 0 262 20 504 247 117 19 chr2 101660555 101660717 -149027137 - MLT1L LTR MaLR -14 601 424 453 270 47 27 chr2 101661027 101661175 -149026679 - MIR SINE MIR -58 204 54 198 245 0 38 chr2 101661291 101661344 -149026510 - L3b LINE CR1 -4 1579 1529 187 291 25 25 chr2 101661803 101661882 -149025972 - L2 LINE L2 -559 2755 2677 1044 296 107 15 chr2 101661910 101662370 -149025484 - MLT1L LTR MaLR -12 603 102 193 343 0 14 chr2 101662602 101662672 -149025182 - L3 LINE CR1 -112 1465 1397 * 498 271 47 61 chr2 101662671 101662885 -149024969 - L3 LINE CR1 -643 934 724 1686 124 60 27 chr2 101663114 101663443 -149024411 - THE1C LTR MaLR 0 375 1 720 320 94 18 chr2 101663547 101663878 -149023976 - L3 LINE CR1 -821 756 401 535 299 197 14 chr2 101664069 101664439 -149023415 + L2 LINE L2 2567 3001 -312 669 181 2 0 chr2 101664440 101664562 -149023292 + MLT1A1 LTR MaLR 255 365 0 1542 119 61 157 chr2 101664562 101664864 -149022990 + L1MB3 LINE L1 5796 6047 -136 2059 82 4 0 chr2 101664864 101665131 -149022723 + AluSx SINE Alu 1 268 -44 1542 119 61 157 chr2 101665131 101665255 -149022599 + L1MB3 LINE L1 6047 6181 -2 238 247 41 14 chr2 101665304 101665377 -149022477 + LTR16C LTR ERVL 417 491 0 2328 49 0 52 chr2 101666209 101666535 -149021319 - AluY SINE Alu -2 309 1 193 279 49 66 chr2 101666556 101666617 -149021237 + MIR SINE MIR 20 79 -183 659 142 189 0 chr2 101666630 101666778 -149021076 - MER5A DNA MER1_type -6 183 4 717 260 64 83 chr2 101666872 101667387 -149020467 - MLT1J LTR MaLR -6 505 1 271 345 95 26 chr2 101667627 101668018 -149019836 + L2 LINE L2 1789 2206 -1108 783 180 58 35 chr2 101668075 101668247 -149019607 + MER58A DNA MER1_type 45 220 -4 1888 126 3 47 chr2 101668256 101668574 -149019280 - AluJb SINE Alu -8 304 1 292 291 149 7 chr2 101668630 101668771 -149019083 + L2 LINE L2 2267 2427 -887 2219 132 24 21 chr2 101668847 101669219 -149018635 + THE1C LTR MaLR 3 375 0 1842 220 78 38 chr2 101670075 101670575 -149017279 + MLT2B1 LTR ERVL 1 520 0 22 56 0 0 chr2 101670932 101670968 -149016886 + AT_rich Low_complexity Low_complexity 1 36 0 389 234 134 47 chr2 101671490 101671661 -149016193 + MIR SINE MIR 71 256 -6 321 376 5 49 chr2 101671668 101671873 -149015981 + L2 LINE L2 2590 2785 -529 234 342 67 8 chr2 101672159 101672279 -149015575 + L2 LINE L2 3097 3223 -49 312 298 36 12 chr2 101673003 101673087 -149014767 - L2 LINE L2 0 3272 3187 194 315 0 0 chr2 101673577 101673631 -149014223 - MIR SINE MIR -108 154 101 763 237 123 26 chr2 101675257 101675485 -149012369 + MIR SINE MIR 13 262 0 2200 105 0 3 chr2 101675573 101675886 -149011968 - AluSx SINE Alu 0 312 1 2062 117 0 3 chr2 101676358 101676656 -149011198 + AluSx SINE Alu 1 297 -15 309 258 125 17 chr2 101676668 101676788 -149011066 - L1ME4a LINE L1 -133 5988 5856 252 86 0 0 chr2 101676788 101676823 -149011031 + (TG)n Simple_repeat Simple_repeat 1 35 0 3148 162 10 2 chr2 101677037 101677544 -149010310 + MLT2B2 LTR ERVL 5 515 0 2286 149 15 33 chr2 101677652 101677795 -149010059 - MLT1B LTR MaLR 0 390 246 2033 92 7 0 chr2 101677795 101678066 -149009788 - AluSp SINE Alu -22 291 19 2286 149 15 33 chr2 101678066 101678319 -149009535 - MLT1B LTR MaLR -144 246 1 192 77 0 0 chr2 101678783 101678809 -149009045 + (A)n Simple_repeat Simple_repeat 1 26 0 292 349 53 20 chr2 101678874 101679026 -149008828 - MIR SINE MIR -56 206 50 199 321 62 18 chr2 101679190 101679302 -149008552 + MIR3 SINE MIR 82 198 -10 661 178 0 0 chr2 101679477 101679584 -149008270 + FLAM_C SINE Alu 2 108 -35 228 91 0 0 chr2 101679589 101679622 -149008232 - tRNA-Ile-ATT tRNA tRNA -38 39 7 508 176 97 48 chr2 101679627 101679792 -149008062 + L1M4 LINE L1 2232 2404 -3742 1016 142 0 7 chr2 101679795 101679950 -149007904 - MER47A DNA MER2_type -212 154 1 397 139 14 0 chr2 101679955 101680027 -149007827 + L1MB7 LINE L1 6097 6169 -15 332 281 0 12 chr2 101681604 101681686 -149006168 + Tigger3(Golem) DNA MER2_type 2 82 -2947 * 1763 99 45 93 chr2 101681672 101681774 -149006080 + Tigger3(Golem) DNA MER2_type 2712 2817 -212 2273 93 0 10 chr2 101681781 101682093 -149005761 - AluSg SINE Alu -1 309 1 742 123 54 15 chr2 101682093 101682215 -149005639 - L1PA15 LINE L1 -6 6159 6030 1763 99 45 93 chr2 101682215 101682239 -149005615 + Tigger3(Golem) DNA MER2_type 2817 2841 -188 1362 199 134 0 chr2 101682239 101682546 -149005308 - MER7A DNA MER2_type 0 346 1 1763 99 45 93 chr2 101682546 101682752 -149005102 + Tigger3(Golem) DNA MER2_type 2841 3029 0 728 324 5 0 chr2 101682766 101682973 -149004881 - MIR SINE MIR -8 254 47 514 285 131 0 chr2 101683893 101684042 -149003812 - MIR SINE MIR -58 150 15 203 324 171 9 chr2 101684053 101684158 -149003696 - L2 LINE L2 -26 3246 3125 1513 266 54 30 chr2 101684212 101684709 -149003145 + MER68 LTR ERV1 53 561 -1 337 296 95 32 chr2 101685014 101685203 -149002651 - L2 LINE L2 -508 2806 2606 1812 150 7 0 chr2 101685683 101685977 -149001877 + AluJo SINE Alu 2 297 -15 822 146 0 0 chr2 101687206 101687329 -149000525 + FLAM_C SINE Alu 3 125 -18 360 133 0 0 chr2 101687796 101687856 -148999998 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 194 277 109 7 chr2 101687965 101688102 -148999752 + L2 LINE L2 2379 2529 -785 231 282 118 0 chr2 101688685 101688770 -148999084 + L2 LINE L2 2652 2746 -568 1136 186 5 19 chr2 101688773 101688988 -148998866 + L1M3 LINE L1 5451 5662 -509 981 89 7 7 chr2 101688988 101689123 -148998731 + AluSq/x SINE Alu 1 135 -178 1928 114 10 24 chr2 101689123 101689421 -148998433 + AluSx SINE Alu 1 294 -18 2293 64 7 3 chr2 101689434 101689730 -148998124 + AluY SINE Alu 1 297 -14 414 185 17 109 chr2 101689744 101689863 -148997991 - L1M3 LINE L1 -375 5808 5701 381 279 130 7 chr2 101690357 101690511 -148997343 - MIR SINE MIR 0 262 90 186 265 29 78 chr2 101690993 101691095 -148996759 + MIR SINE MIR 109 205 -57 569 218 120 21 chr2 101691239 101691381 -148996473 - MIR SINE MIR -12 250 95 356 245 35 49 chr2 101692846 101692989 -148994865 + MLT1K LTR MaLR 445 585 -3 1863 163 59 19 chr2 101693312 101693537 -148994317 - MLT1B LTR MaLR 0 390 143 2830 122 37 54 chr2 101693537 101694019 -148993835 + MER101 LTR ERV1 1 474 0 1863 163 59 19 chr2 101694019 101694168 -148993686 - MLT1B LTR MaLR -247 143 1 520 290 6 12 chr2 101695019 101695181 -148992673 + MER105 DNA DNA 1 161 -43 541 214 94 0 chr2 101695420 101695537 -148992317 - MER3 DNA MER1_type 0 209 82 2121 91 3 7 chr2 101695571 101695883 -148991971 - AluSp SINE Alu 0 311 1 26 0 0 0 chr2 101696058 101696084 -148991770 + AT_rich Low_complexity Low_complexity 1 26 0 1988 169 36 13 chr2 101696429 101696813 -148991041 - L1MB3 LINE L1 -8 6175 5783 405 281 157 64 chr2 101697618 101698156 -148989698 - L2 LINE L2 -3 3269 2692 1086 196 101 109 chr2 101698165 101698481 -148989373 - MLT1D LTR MaLR -8 497 185 2030 108 0 0 chr2 101698481 101698760 -148989094 - AluSx SINE Alu -33 279 1 1086 196 101 109 chr2 101698760 101698937 -148988917 - MLT1D LTR MaLR -320 185 8 321 335 122 22 chr2 101699665 101700337 -148987517 - L2 LINE L2 -49 3223 2481 480 295 55 28 chr2 101700640 101700857 -148986997 - MLT1L LTR MaLR -73 542 320 439 258 148 22 chr2 101700943 101701172 -148986682 - MIR SINE MIR -3 259 2 1252 212 75 31 chr2 101701544 101701772 -148986082 - MLT1A1 LTR MaLR 0 365 115 2408 57 0 7 chr2 101701772 101702068 -148985786 + AluY SINE Alu 1 294 -17 1252 212 75 31 chr2 101702068 101702188 -148985666 - MLT1A1 LTR MaLR -250 115 2 274 358 81 26 chr2 101702244 101702515 -148985339 + L2 LINE L2 2151 2436 -878 1487 102 5 0 chr2 101703121 101703326 -148984528 + AluSq SINE Alu 1 206 -107 1143 225 104 69 chr2 101703335 101703386 -148984468 + MLT1C LTR MaLR 48 96 -371 2422 77 0 0 chr2 101703386 101703697 -148984157 + AluY SINE Alu 1 311 0 1143 225 104 69 chr2 101703697 101704049 -148983805 + MLT1C LTR MaLR 96 465 -2 406 250 31 0 chr2 101705990 101706086 -148981768 + MIR SINE MIR 80 178 -84 402 242 132 28 chr2 101707047 101707229 -148980625 + LTR67 LTR ERVL 357 557 0 1965 149 16 75 chr2 101708160 101708231 -148979623 - MLT1A1 LTR MaLR 0 365 291 1456 156 6 98 chr2 101708231 101708557 -148979297 + AluJo SINE Alu 1 296 -16 1965 149 16 75 chr2 101708557 101708873 -148978981 - MLT1A1 LTR MaLR -74 291 1 1958 149 70 14 chr2 101709907 101710262 -148977592 - THE1C LTR MaLR 0 375 1 233 283 0 0 chr2 101710605 101710658 -148977196 + GA-rich Low_complexity Low_complexity 3 55 0 3907 150 33 8 chr2 101711092 101711797 -148976057 + L1MB3 LINE L1 5452 6173 -10 228 312 82 78 chr2 101712129 101712360 -148975494 - MIR SINE MIR -30 232 1 296 222 83 0 chr2 101712473 101712545 -148975309 + MER91C DNA MER1_type 63 140 0 352 317 140 0 chr2 101713348 101713512 -148974342 + MIR SINE MIR 58 244 -18 32 20 0 20 chr2 101713839 101713853 -148974001 + AT_rich Low_complexity Low_complexity 1 14 -35 363 203 0 0 chr2 101713853 101713932 -148973922 + L1PB4 LINE L1 6071 6149 -7 32 20 0 20 chr2 101713932 101713967 -148973887 + AT_rich Low_complexity Low_complexity 14 49 0 252 336 16 39 chr2 101714168 101714296 -148973558 - L2 LINE L2 -1061 2253 2129 182 318 34 23 chr2 101714460 101714548 -148973306 - L2 LINE L2 -219 3053 2965 2097 100 0 23 chr2 101714668 101714969 -148972885 + AluSx SINE Alu 1 294 -18 216 300 0 0 chr2 101715963 101716023 -148971831 + GA-rich Low_complexity Low_complexity 1 60 0 4323 184 33 45 chr2 101716114 101717393 -148970461 - L1MB8 LINE L1 -4 6174 4909 2104 138 0 0 chr2 101717393 101717705 -148970149 + AluSx SINE Alu 1 312 0 4323 184 33 45 chr2 101717705 101717815 -148970039 - L1MB8 LINE L1 -1269 4909 4799 222 339 9 18 chr2 101718255 101718367 -148969487 + GA-rich Low_complexity Low_complexity 4 114 0 623 271 65 36 chr2 101718409 101718656 -148969198 + MIR SINE MIR 2 255 -7 738 222 21 26 chr2 101718713 101718902 -148968952 - MER5A DNA MER1_type 0 189 2 321 347 131 9 chr2 101720763 101720985 -148966869 + MIR SINE MIR 14 262 0 2636 150 73 23 chr2 101721028 101721547 -148966307 + L1MC1 LINE L1 5785 6329 -4 21 0 0 0 chr2 101722020 101722041 -148965813 + AT_rich Low_complexity Low_complexity 1 21 0 833 137 23 8 chr2 101722041 101722172 -148965682 - FLAM_C SINE Alu 0 133 1 232 345 92 38 chr2 101723083 101723321 -148964533 + L2 LINE L2 3017 3267 -5 207 197 33 33 chr2 101725496 101725557 -148962297 + (CCCCAG)n Simple_repeat Simple_repeat 4 64 0 266 149 0 46 chr2 101725739 101725826 -148962028 + (GGA)n Simple_repeat Simple_repeat 1 83 0 219 69 0 0 chr2 101725955 101725984 -148961870 + (CGG)n Simple_repeat Simple_repeat 3 31 0 27 29 0 0 chr2 101726083 101726117 -148961737 + GC_rich Low_complexity Low_complexity 1 34 0 244 279 48 39 chr2 101728715 101728819 -148959035 + L2 LINE L2 3168 3272 0 279 217 283 0 chr2 101729225 101729331 -148958523 - MER5A DNA MER1_type -21 168 33 213 296 237 7 chr2 101729632 101729767 -148958087 + MIR SINE MIR 21 186 -76 592 286 133 39 chr2 101731223 101731764 -148956090 + MLT1L LTR MaLR 18 609 -6 320 288 138 41 chr2 101731779 101731871 -148955983 - L1ME4a LINE L1 -108 6013 5931 2129 101 3 22 chr2 101731871 101732187 -148955667 + AluSg SINE Alu 1 310 0 320 288 138 41 chr2 101732187 101732669 -148955185 - L1ME4a LINE L1 -190 5931 5383 5719 148 25 22 chr2 101733088 101734883 -148952971 - L1PA16 LINE L1 0 6166 4375 1441 93 138 9 chr2 101734888 101735113 -148952741 - AluSg1 SINE Alu -6 303 50 1566 187 6 33 chr2 101735126 101735458 -148952396 - L1 LINE L1 -1763 4383 4061 370 329 52 0 chr2 101735536 101735746 -148952108 + HAL1 LINE L1 743 963 -1544 2346 59 7 3 chr2 101736032 101736338 -148951516 - L1PA5 LINE L1 0 6154 5848 2108 117 13 0 chr2 101736727 101737035 -148950819 + AluSx SINE Alu 1 312 0 290 230 44 5 chr2 101738943 101739020 -148948834 + MIR SINE MIR 85 162 -46 251 194 28 56 chr2 101739700 101739772 -148948082 - MIR3 SINE MIR -29 179 110 1917 95 0 75 chr2 101740390 101740724 -148947130 - AluSx SINE Alu 0 311 1 269 322 58 8 chr2 101740826 101740947 -148946907 - MIR SINE MIR -59 203 77 1696 110 68 81 chr2 101743013 101743322 -148944532 - AluSp SINE Alu -8 305 1 371 207 11 0 chr2 101743575 101743662 -148944192 - MIR3 SINE MIR -7 201 114 23 0 0 0 chr2 101743883 101743906 -148943948 + AT_rich Low_complexity Low_complexity 1 23 0 2163 114 0 0 chr2 101743990 101744287 -148943567 - AluSq SINE Alu -16 297 1 29 28 0 0 chr2 101744577 101744613 -148943241 + AT_rich Low_complexity Low_complexity 1 36 0 426 158 0 49 chr2 101744613 101744695 -148943159 + Tigger2 DNA MER2_type 1 78 -2640 * 2251 147 49 62 chr2 101744673 101744827 -148943027 + Tigger2 DNA MER2_type 2273 2428 -290 194 62 31 0 chr2 101744827 101744859 -148942995 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1966 116 0 0 chr2 101744863 101745138 -148942716 - AluSx SINE Alu -37 275 1 2251 147 49 62 chr2 101745138 101745428 -148942426 + Tigger2 DNA MER2_type 2431 2716 -2 264 262 166 21 chr2 101745785 101745930 -148941924 + L2 LINE L2 2924 3089 -183 691 315 32 4 chr2 101746598 101746849 -148941005 + MIR SINE MIR 5 262 0 2068 108 3 20 chr2 101746862 101747167 -148940687 + AluSq SINE Alu 1 300 -13 435 235 6 22 chr2 101747378 101747557 -148940297 + (CATA)n Simple_repeat Simple_repeat 4 179 0 187 261 14 29 chr2 101747626 101747764 -148940090 + (CATATA)n Simple_repeat Simple_repeat 6 141 0 264 59 0 0 chr2 101747786 101747820 -148940034 + (CA)n Simple_repeat Simple_repeat 2 35 0 1031 206 11 0 chr2 101747820 101748004 -148939850 - LTR68 LTR ERV1 -258 482 297 226 255 81 67 chr2 101748195 101748344 -148939510 + LTR40b LTR ERVL 305 455 -7 2327 82 0 0 chr2 101748648 101748941 -148938913 + AluSc SINE Alu 1 293 -16 2787 180 31 13 chr2 101750607 101751156 -148936698 - MER89 LTR ERV1 0 559 1 500 234 201 0 chr2 101752445 101752599 -148935255 - MIR SINE MIR 0 262 78 470 101 25 0 chr2 101753001 101753080 -148934774 + L1MB4 LINE L1 6099 6179 -1 2357 64 0 3 chr2 101753084 101753379 -148934475 - AluY SINE Alu -17 294 1 276 297 47 16 chr2 101755072 101755200 -148932654 + MIR3 SINE MIR 2 133 -75 291 122 0 0 chr2 101755721 101755770 -148932084 + (A)n Simple_repeat Simple_repeat 1 49 0 2513 166 25 30 chr2 101756211 101756380 -148931474 + L1MB2 LINE L1 5667 5835 -336 2388 90 0 0 chr2 101756380 101756690 -148931164 + AluSq SINE Alu 1 310 -3 2513 166 25 30 chr2 101756690 101757031 -148930823 + L1MB2 LINE L1 5835 6169 -2 428 250 80 38 chr2 101757225 101757437 -148930417 + L1ME4a LINE L1 5705 5925 -196 238 352 48 0 chr2 101757711 101757816 -148930038 - MIR SINE MIR -79 183 74 2469 55 0 3 chr2 101757824 101758134 -148929720 + AluY SINE Alu 1 309 -2 29 0 0 0 chr2 101758577 101758606 -148929248 + AT_rich Low_complexity Low_complexity 1 29 0 1301 152 116 29 chr2 101759609 101759885 -148927969 + AluJb SINE Alu 3 302 0 307 260 89 35 chr2 101760223 101760392 -148927462 - MLT1K LTR MaLR -278 310 133 971 193 30 50 chr2 101760567 101760868 -148926986 + MER33 DNA MER1_type 30 324 0 204 294 108 0 chr2 101761391 101761493 -148926361 - L2 LINE L2 0 3313 3201 186 43 0 0 chr2 101762421 101762444 -148925410 + (CGGGGG)n Simple_repeat Simple_repeat 3 25 0 2301 71 27 0 chr2 101762737 101763031 -148924823 + AluSq SINE Alu 1 302 -11 243 248 238 0 chr2 101763064 101763169 -148924685 - L2 LINE L2 -1 3271 3142 1966 105 14 7 chr2 101764698 101764984 -148922870 + AluSx SINE Alu 3 290 -22 322 293 109 64 chr2 101765069 101765352 -148922502 - L2 LINE L2 -35 3237 2942 3981 192 144 12 chr2 101765499 101766566 -148921288 - L1MC4 LINE L1 0 8042 6835 1485 158 92 0 chr2 101766596 101766880 -148920974 - AluJo SINE Alu -2 310 1 611 315 167 11 chr2 101766885 101767358 -148920496 - L2 LINE L2 -536 2778 2232 213 229 21 0 chr2 101767682 101767730 -148920124 + (TATG)n Simple_repeat Simple_repeat 3 51 0 225 108 0 0 chr2 101769031 101769068 -148918786 + (TTGG)n Simple_repeat Simple_repeat 2 38 0 2099 180 134 2 chr2 101770446 101770907 -148916947 - Charlie1b DNA MER1_type 0 523 2 322 263 105 15 chr2 101772376 101772509 -148915345 - L2 LINE L2 0 3313 3169 636 251 90 57 chr2 101772834 101773312 -148914542 - L1MEd LINE L1 -3419 2710 2217 194 0 0 37 chr2 101773410 101773437 -148914417 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 691 171 0 17 chr2 101773437 101773554 -148914300 - AluJb SINE Alu -197 115 1 22 35 0 0 chr2 101773561 101773590 -148914264 + AT_rich Low_complexity Low_complexity 1 29 0 32 57 0 0 chr2 101773668 101773721 -148914133 + AT_rich Low_complexity Low_complexity 1 53 0 1139 291 73 57 chr2 101773808 101774647 -148913207 - L1MEd LINE L1 -4614 1696 805 1876 133 13 23 chr2 101774647 101774949 -148912905 - AluSx SINE Alu -13 299 1 1139 291 73 57 chr2 101774949 101775316 -148912538 - L1MEd LINE L1 -5505 805 445 2332 66 17 0 chr2 101775611 101775912 -148911942 - AluY SINE Alu -5 306 1 1870 137 14 0 chr2 101776120 101776405 -148911449 - AluJb SINE Alu -23 289 1 584 183 48 63 chr2 101776802 101776928 -148910926 + MER58A DNA MER1_type 1 124 0 1882 164 7 0 chr2 101777040 101777344 -148910510 - AluSx SINE Alu -6 306 1 577 267 184 5 chr2 101777917 101778134 -148909720 + MIR SINE MIR 6 261 -1 230 290 159 14 chr2 101778143 101778281 -148909573 + MIR SINE MIR 100 257 -5 839 119 0 2 chr2 101778734 101778986 -148908868 + AluSx SINE Alu 1 303 -9 345 330 0 0 chr2 101778999 101779090 -148908764 - L1MC4 LINE L1 -1339 6703 6613 1720 130 4 18 chr2 101779684 101779961 -148907893 - AluSq SINE Alu -5 308 36 2219 100 0 3 chr2 101780171 101780471 -148907383 + AluSx SINE Alu 1 299 -13 1961 170 66 21 chr2 101780771 101781148 -148906706 + L1MB2 LINE L1 5776 6169 -2 21 0 0 0 chr2 101781148 101781169 -148906685 + AT_rich Low_complexity Low_complexity 1 21 0 405 0 0 0 chr2 101781173 101781218 -148906636 + (CA)n Simple_repeat Simple_repeat 2 46 0 254 249 22 31 chr2 101782196 101782282 -148905572 + MER5A DNA MER1_type 90 182 -7 218 299 13 52 chr2 101782217 101782294 -148905560 - MER5A DNA MER1_type -106 83 10 * 2143 62 69 3 chr2 101782895 101783183 -148904671 + AluY SINE Alu 1 307 -4 2135 97 23 3 chr2 101784552 101784851 -148903003 + AluSx SINE Alu 1 305 -7 1275 227 68 52 chr2 101784919 101785403 -148902451 - L1MA9 LINE L1 -8 6304 5813 225 353 24 0 chr2 101785692 101785777 -148902077 + L3 LINE CR1 1180 1266 -311 3136 173 58 41 chr2 101785784 101786494 -148901360 + L1MB5 LINE L1 5453 6174 0 292 278 98 8 chr2 101786717 101786850 -148901004 - MER5B DNA MER1_type 0 178 34 218 303 45 0 chr2 101786967 101787056 -148900798 + MER5A DNA MER1_type 14 106 -83 2040 115 0 3 chr2 101787118 101787414 -148900440 + AluSx SINE Alu 1 295 -17 496 255 48 14 chr2 101787808 101787953 -148899901 - L1MD2 LINE L1 -14 6345 6196 2254 68 0 13 chr2 101788043 101788351 -148899503 + AluY SINE Alu 1 304 -7 204 67 0 0 chr2 101788484 101788514 -148899340 + (TCTCTG)n Simple_repeat Simple_repeat 3 32 0 204 390 0 12 chr2 101789493 101789575 -148898279 - MIR SINE MIR -116 146 66 29 0 0 0 chr2 101790582 101790611 -148897243 + AT_rich Low_complexity Low_complexity 1 29 0 2206 84 0 7 chr2 101790669 101790965 -148896889 - AluY SINE Alu -17 294 1 1738 139 50 0 chr2 101791395 101791676 -148896178 - AluSx SINE Alu -17 295 1 21 0 0 0 chr2 101791740 101791761 -148896093 + AT_rich Low_complexity Low_complexity 1 21 0 220 181 181 14 chr2 101792321 101792393 -148895461 - MIR SINE MIR -132 130 47 192 77 0 0 chr2 101793385 101793411 -148894443 + (T)n Simple_repeat Simple_repeat 1 26 0 252 146 12 73 chr2 101793543 101793625 -148894229 + (TTATA)n Simple_repeat Simple_repeat 3 79 0 1597 288 66 21 chr2 101794645 101795368 -148892486 + HAL1b LINE L1 95 850 -498 262 227 15 0 chr2 101795667 101795733 -148892121 + CT-rich Low_complexity Low_complexity 4 70 0 192 40 0 0 chr2 101795796 101795821 -148892033 + (CAA)n Simple_repeat Simple_repeat 2 26 0 4017 148 79 107 chr2 101795923 101796875 -148890979 + MER21A LTR ERV1 1 925 -6 275 264 16 32 chr2 101796892 101797017 -148890837 + L1M4 LINE L1 2178 2300 -3846 2929 107 42 7 chr2 101797019 101797448 -148890406 - MLT2A1 LTR ERVL 0 444 1 20063 60 14 0 chr2 101797448 101799877 -148887977 - HERVL-A1 LTR ERVL 0 5654 3193 1195 36 21 0 chr2 101799878 101800018 -148887836 - HERVL-A1 LTR ERVL -3118 2536 2394 * 10140 69 13 1 chr2 101800015 101801290 -148886564 - HERVL LTR ERVL -2466 3188 1898 4427 78 30 0 chr2 101801289 101801855 -148885999 - HERVL LTR ERVL -4795 859 277 * 244 279 48 39 chr2 101804468 101804572 -148883282 + L2 LINE L2 3168 3272 0 279 217 283 0 chr2 101804978 101805084 -148882770 - MER5A DNA MER1_type -21 168 33 213 296 237 7 chr2 101805385 101805520 -148882334 + MIR SINE MIR 21 186 -76 592 286 133 39 chr2 101806976 101807517 -148880337 + MLT1L LTR MaLR 18 609 -6 295 284 155 43 chr2 101807532 101807624 -148880230 - L1ME4a LINE L1 -108 6013 5933 2129 101 3 22 chr2 101807624 101807940 -148879914 + AluSg SINE Alu 1 310 0 295 284 155 43 chr2 101807940 101808337 -148879517 - L1ME4a LINE L1 -188 5933 5469 324 234 131 0 chr2 101808356 101808463 -148879391 - L1ME4a LINE L1 -201 5920 5800 5719 148 25 22 chr2 101808841 101810636 -148877218 - L1PA16 LINE L1 0 6166 4375 1441 93 138 9 chr2 101810641 101810866 -148876988 - AluSg1 SINE Alu -6 303 50 1608 186 3 33 chr2 101810879 101811212 -148876642 - L1 LINE L1 -1763 4383 4061 370 329 52 0 chr2 101811289 101811499 -148876355 + HAL1 LINE L1 743 963 -1544 2346 59 7 3 chr2 101811785 101812091 -148875763 - L1PA5 LINE L1 0 6154 5848 2108 117 13 0 chr2 101812480 101812788 -148875066 + AluSx SINE Alu 1 312 0 290 230 44 5 chr2 101814696 101814773 -148873081 + MIR SINE MIR 85 162 -46 251 194 28 56 chr2 101815453 101815525 -148872329 - MIR3 SINE MIR -29 179 110 1917 95 0 75 chr2 101816143 101816477 -148871377 - AluSx SINE Alu 0 311 1 269 322 58 8 chr2 101816579 101816700 -148871154 - MIR SINE MIR -59 203 77 1696 110 68 81 chr2 101818766 101819075 -148868779 - AluSp SINE Alu -8 305 1 371 207 11 0 chr2 101819328 101819415 -148868439 - MIR3 SINE MIR -7 201 114 23 0 0 0 chr2 101819636 101819659 -148868195 + AT_rich Low_complexity Low_complexity 1 23 0 2163 114 0 0 chr2 101819743 101820040 -148867814 - AluSq SINE Alu -16 297 1 29 28 0 0 chr2 101820330 101820366 -148867488 + AT_rich Low_complexity Low_complexity 1 36 0 426 158 0 49 chr2 101820366 101820448 -148867406 + Tigger2 DNA MER2_type 1 78 -2640 * 2251 147 49 62 chr2 101820426 101820580 -148867274 + Tigger2 DNA MER2_type 2273 2428 -290 194 62 31 0 chr2 101820580 101820612 -148867242 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1966 116 0 0 chr2 101820616 101820891 -148866963 - AluSx SINE Alu -37 275 1 2251 147 49 62 chr2 101820891 101821181 -148866673 + Tigger2 DNA MER2_type 2431 2716 -2 264 262 166 21 chr2 101821538 101821683 -148866171 + L2 LINE L2 2924 3089 -183 691 315 32 4 chr2 101822351 101822602 -148865252 + MIR SINE MIR 5 262 0 2068 108 3 20 chr2 101822615 101822920 -148864934 + AluSq SINE Alu 1 300 -13 435 235 6 22 chr2 101823131 101823310 -148864544 + (CATA)n Simple_repeat Simple_repeat 4 179 0 187 261 14 29 chr2 101823379 101823517 -148864337 + (CATATA)n Simple_repeat Simple_repeat 6 141 0 264 59 0 0 chr2 101823539 101823573 -148864281 + (CA)n Simple_repeat Simple_repeat 2 35 0 1031 206 11 0 chr2 101823573 101823757 -148864097 - LTR68 LTR ERV1 -258 482 297 244 255 0 0 chr2 101824848 101824899 -148862955 - L1MC4 LINE L1 -644 7398 7348 182 207 0 0 chr2 101824909 101824938 -148862916 - L2 LINE L2 -7 3265 3237 204 316 31 10 chr2 101826237 101826335 -148861519 + L2 LINE L2 2873 2972 -300 2496 50 0 0 chr2 101826640 101826937 -148860917 + AluY SINE Alu 3 299 -12 2032 123 10 3 chr2 101828396 101828705 -148859149 - AluSx SINE Alu -1 311 1 1202 200 18 0 chr2 101829379 101829599 -148858255 + MER58A DNA MER1_type 1 224 0 4210 133 59 4 chr2 101830054 101830733 -148857121 - LTR62 LTR ERVK -3 716 1 285 330 47 37 chr2 101830949 101831164 -148856690 - MIR SINE MIR -13 249 33 212 314 76 34 chr2 101831878 101831996 -148855858 - MIR SINE MIR -111 151 29 228 135 0 0 chr2 101832494 101832531 -148855323 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 190 263 0 18 chr2 101832538 101832584 -148855270 - L2 LINE L2 -5 3267 3221 2771 83 11 3 chr2 101832584 101832956 -148854898 - THE1C LTR MaLR 0 375 1 288 167 50 0 chr2 101833109 101833169 -148854685 + L2 LINE L2 2720 2782 -532 299 326 110 25 chr2 101833221 101833466 -148854388 + L2 LINE L2 2925 3190 -123 775 256 38 61 chr2 101833648 101833774 -148854080 + L1MB3 LINE L1 4488 4615 -1531 1285 200 109 8 chr2 101833774 101834039 -148853815 - AluJo SINE Alu -9 293 2 775 256 38 61 chr2 101834039 101834225 -148853629 + L1MB3 LINE L1 4615 4793 -1353 2014 189 129 44 chr2 101834568 101834908 -148852946 + L1MC3 LINE L1 7235 7633 -152 2056 119 3 3 chr2 101834908 101835211 -148852643 - AluSx SINE Alu -9 303 1 2014 189 129 44 chr2 101835211 101835372 -148852482 + L1MC3 LINE L1 7633 7779 -6 1390 233 92 37 chr2 101835435 101836304 -148851550 + L1MB3 LINE L1 4789 5694 -470 1234 188 35 8 chr2 101836295 101836550 -148851304 - L1MC4a LINE L1 -484 7324 7063 * 743 149 16 0 chr2 101836578 101836699 -148851155 - BC200 scRNA scRNA -61 139 17 410 229 28 0 chr2 101836710 101836819 -148851035 - L1MD3 LINE L1 -847 7148 7037 318 238 189 8 chr2 101836913 101837035 -148850819 - L1MC4a LINE L1 -835 6973 6830 336 171 105 13 chr2 101837258 101837334 -148850520 + LTR33 LTR ERVL 133 215 -306 258 319 62 24 chr2 101837368 101837578 -148850276 + LTR33 LTR ERVL 304 521 0 316 321 95 40 chr2 101837677 101837929 -148849925 - L3b LINE CR1 -204 1379 1114 2005 203 62 0 chr2 101837985 101838419 -148849435 + L1MB3 LINE L1 5716 6176 -7 670 170 113 90 chr2 101840001 101840213 -148847641 + Charlie1 DNA MER1_type 1 217 -2544 496 191 0 0 chr2 101840230 101840319 -148847535 + Charlie1 DNA MER1_type 2673 2761 0 24 0 0 0 chr2 101840392 101840416 -148847438 + AT_rich Low_complexity Low_complexity 1 24 0 212 362 0 0 chr2 101840809 101840878 -148846976 + MIR SINE MIR 31 99 -109 196 215 32 129 chr2 101840876 101840969 -148846885 - MIR SINE MIR 0 262 179 * 261 292 56 56 chr2 101842029 101842190 -148845664 + MIR SINE MIR 26 186 -76 646 133 0 0 chr2 101842284 101842382 -148845472 - AluSg/x SINE Alu -18 292 195 638 314 42 20 chr2 101842423 101842667 -148845187 - MIR SINE MIR -5 257 9 306 0 0 0 chr2 101843177 101843211 -148844643 + (CA)n Simple_repeat Simple_repeat 2 35 0 532 251 111 6 chr2 101843759 101843930 -148843924 + MIR SINE MIR 2 190 -72 617 243 175 10 chr2 101843981 101844187 -148843667 - MIR SINE MIR -6 256 17 2036 121 3 20 chr2 101846208 101846514 -148841340 - AluSx SINE Alu -11 301 1 21 57 0 0 chr2 101847030 101847065 -148840789 + AT_rich Low_complexity Low_complexity 1 35 0 800 115 9 0 chr2 101847118 101847231 -148840623 - AluSp/q SINE Alu -20 293 180 327 288 0 0 chr2 101847231 101847311 -148840543 - L1ME4a LINE L1 -79 6042 5963 2113 112 0 0 chr2 101847324 101847618 -148840236 - AluSx SINE Alu -18 294 1 318 26 0 0 chr2 101847902 101847941 -148839913 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 661 320 107 0 chr2 101848110 101848344 -148839510 - MLT1G1 LTR MaLR 0 595 337 608 290 15 30 chr2 101848367 101848594 -148839260 - MLT1G1 LTR MaLR -344 223 1 248 294 49 49 chr2 101848595 101848738 -148839116 - MIR3 SINE MIR -56 152 10 255 374 0 0 chr2 101850448 101850571 -148837283 + L1MD2 LINE L1 31 153 -6387 4684 232 107 24 chr2 101851275 101852922 -148834932 + L1MD2 LINE L1 1798 3716 -2824 2097 124 0 3 chr2 101852922 101853229 -148834625 + AluSq SINE Alu 1 306 -7 4684 232 107 24 chr2 101853229 101853931 -148833923 + L1MD2 LINE L1 3716 4358 -2182 2945 241 36 6 chr2 101853918 101855045 -148832809 + L1MD2 LINE L1 5372 6545 -15 * 207 0 0 0 chr2 101855053 101855076 -148832778 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1598 133 48 27 chr2 101855795 101856103 -148831751 + L1MA7 LINE L1 5956 6271 -20 571 294 156 18 chr2 101856279 101856554 -148831300 - MLT1I LTR MaLR -96 313 1 664 274 104 19 chr2 101856854 101857066 -148830788 + MIR SINE MIR 23 252 -10 204 267 0 0 chr2 101857192 101857237 -148830617 + CT-rich Low_complexity Low_complexity 3 47 0 783 238 0 0 chr2 101857240 101857408 -148830446 + L1ME1 LINE L1 5285 5452 -710 1750 244 126 11 chr2 101857437 101857961 -148829893 + L1ME1 LINE L1 5573 6156 -10 2148 88 0 10 chr2 101857975 101858272 -148829582 + AluSq SINE Alu 1 294 -19 2472 166 64 11 chr2 101859749 101860219 -148827635 - L1MC1 LINE L1 -1 6332 5838 4518 167 39 48 chr2 101861463 101862607 -148825247 - L1MB7 LINE L1 -16 6168 5049 2201 92 20 0 chr2 101862607 101862911 -148824943 - AluY SINE Alu -1 310 1 4518 167 39 48 chr2 101862911 101863050 -148824804 - L1MB7 LINE L1 -1135 5049 4910 663 239 131 16 chr2 101863061 101863373 -148824481 - L1ME3A LINE L1 0 6170 5794 501 262 93 65 chr2 101864482 101864589 -148823265 - MIR SINE MIR 0 262 159 1932 143 0 3 chr2 101864589 101864882 -148822972 - AluSx SINE Alu -20 292 1 501 262 93 65 chr2 101864882 101865022 -148822832 - MIR SINE MIR -103 159 8 532 171 9 27 chr2 101865120 101865231 -148822623 + MER5B DNA MER1_type 4 112 -66 660 190 35 35 chr2 101865239 101865381 -148822473 - MER63A DNA MER1_type -23 187 46 203 284 54 27 chr2 101865392 101865466 -148822388 - MER5A DNA MER1_type -78 111 36 * 397 171 29 0 chr2 101865417 101865487 -148822367 + MER5B DNA MER1_type 104 175 -3 2273 80 7 0 chr2 101867161 101867461 -148820393 - AluY SINE Alu -9 302 1 784 174 230 0 chr2 101871548 101871726 -148816128 - MER20 DNA MER1_type 0 219 1 2214 99 7 3 chr2 101872375 101872678 -148815176 + AluSx SINE Alu 1 304 -8 292 253 12 48 chr2 101872721 101872804 -148815050 + L2 LINE L2 3234 3313 0 222 218 36 0 chr2 101874174 101874229 -148813625 + CT-rich Low_complexity Low_complexity 4 60 0 1899 129 3 10 chr2 101874784 101875078 -148812776 + AluSx SINE Alu 3 294 -18 239 320 113 56 chr2 101875082 101875313 -148812541 + L2 LINE L2 3028 3271 -1 2210 76 0 10 chr2 101875365 101875666 -148812188 - AluY SINE Alu -13 298 1 249 311 39 0 chr2 101875703 101875806 -148812048 + L1ME LINE L1 5713 5819 -302 2225 84 3 3 chr2 101876375 101876672 -148811182 + AluY SINE Alu 1 297 -14 392 281 51 71 chr2 101876797 101877050 -148810804 + HAL1b LINE L1 109 356 -992 1774 137 4 0 chr2 101877768 101878039 -148809815 + AluSx SINE Alu 11 282 -30 222 37 0 0 chr2 101878039 101878066 -148809788 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 224 264 0 19 chr2 101878700 101878753 -148809101 + G-rich Low_complexity Low_complexity 2 53 0 1705 168 32 7 chr2 101880906 101881216 -148806638 - L1MB3 LINE L1 -274 5909 5592 21 0 0 0 chr2 101881247 101881268 -148806586 + AT_rich Low_complexity Low_complexity 1 21 0 1956 94 0 4 chr2 101881493 101881760 -148806094 + AluSg SINE Alu 1 266 -44 2118 132 38 11 chr2 101881861 101882231 -148805623 + L1MB3 LINE L1 5803 6182 -1 1963 73 8 0 chr2 101882276 101882535 -148805319 + AluY SINE Alu 41 301 -10 1856 88 8 4 chr2 101882698 101882958 -148804896 + AluSp SINE Alu 53 313 0 2118 111 7 0 chr2 101883457 101883763 -148804091 + AluSx SINE Alu 1 308 -4 345 335 87 14 chr2 101883898 101884116 -148803738 - MIR SINE MIR -20 242 9 1684 219 119 15 chr2 101884284 101884746 -148803108 - MER74A LTR ERVL -39 519 10 2044 144 0 0 chr2 101884746 101885058 -148802796 + AluSx SINE Alu 1 312 0 1700 114 11 22 chr2 101885223 101885495 -148802359 - AluSx SINE Alu 0 312 44 1625 171 4 4 chr2 101886263 101886568 -148801286 - AluJo SINE Alu 0 305 1 2107 159 5 30 chr2 101886569 101886940 -148800914 - L1PA16 LINE L1 -13 6153 5792 1617 64 20 20 chr2 101888013 101888263 -148799591 + AluY SINE Alu 5 254 -57 187 311 66 0 chr2 101890179 101890240 -148797614 - MIR SINE MIR -5 257 193 * 222 204 20 0 chr2 101890231 101890280 -148797574 + MIR SINE MIR 188 237 -25 * 840 227 74 5 chr2 101890261 101890464 -148797390 - MIR SINE MIR -33 229 13 1692 167 7 0 chr2 101890960 101891247 -148796607 + AluSx SINE Alu 4 292 -20 1063 267 90 83 chr2 101892201 101893112 -148794742 - L1ME3A LINE L1 0 6170 5254 2227 159 99 2 chr2 101893148 101893582 -148794272 - LTR53 LTR ERVL -43 476 1 267 298 24 0 chr2 101893582 101893666 -148794188 - L1ME3A LINE L1 -903 5243 5158 184 320 48 64 chr2 101894621 101894746 -148793108 + L3b LINE CR1 1218 1340 -243 197 341 47 23 chr2 101894931 101895060 -148792794 + L2 LINE L2 3173 3304 -9 241 361 41 0 chr2 101895617 101895714 -148792140 - L2 LINE L2 -43 3229 3129 184 232 54 36 chr2 101895881 101895937 -148791917 - MIR SINE MIR -116 146 90 298 298 138 52 chr2 101896112 101896685 -148791169 - L2 LINE L2 -352 2962 2341 220 315 91 42 chr2 101900120 101900263 -148787591 - MER5A DNA MER1_type -39 150 1 3495 133 27 7 chr2 101900376 101900961 -148786893 + L1MB3 LINE L1 5585 6181 -2 2251 78 7 0 chr2 101900965 101901274 -148786580 + AluY SINE Alu 1 311 0 27 0 0 0 chr2 101901274 101901301 -148786553 + AT_rich Low_complexity Low_complexity 1 27 0 1831 115 59 21 chr2 101901301 101901587 -148786267 + Tigger1 DNA MER2_type 976 1272 -1146 2367 126 28 106 chr2 101901587 101901714 -148786140 + MSTB LTR MaLR 1 136 -290 2008 135 11 55 chr2 101901714 101902062 -148785792 + MER1B DNA MER1_type 5 337 0 2367 126 28 106 chr2 101902062 101902396 -148785458 + MSTB LTR MaLR 136 426 0 2191 74 20 13 chr2 101902396 101902694 -148785160 + Tigger1 DNA MER2_type 1268 1567 -851 2186 62 0 21 chr2 101903164 101903499 -148784355 - AluY SINE Alu 0 329 1 2232 98 0 0 chr2 101903844 101904140 -148783714 + AluSx SINE Alu 1 296 -16 6167 132 25 50 chr2 101904381 101904483 -148783371 - Tigger1 DNA MER2_type -1368 1050 947 2309 77 0 3 chr2 101904483 101904795 -148783059 - AluY SINE Alu 0 311 1 6167 132 25 50 chr2 101904795 101905769 -148782085 - Tigger1 DNA MER2_type -1471 947 1 706 233 29 118 chr2 101905969 101906283 -148781571 + L1MC4a LINE L1 6542 6827 -981 2076 93 28 3 chr2 101906316 101906607 -148781247 + AluSx SINE Alu 1 298 -14 2259 115 41 30 chr2 101906630 101906996 -148780858 + THE1C LTR MaLR 1 370 -5 437 268 33 42 chr2 101907231 101907539 -148780315 + L1MC4 LINE L1 6954 7215 -746 255 314 28 59 chr2 101907618 101907873 -148779981 + L1MC5 LINE L1 7249 7495 -466 3623 119 62 20 chr2 101907885 101908040 -148779814 + LTR8A LTR ERV1 1 148 -579 2026 118 154 37 chr2 101908040 101908217 -148779637 - MSTA LTR MaLR 0 428 273 2088 77 0 0 chr2 101908217 101908489 -148779365 - AluY SINE Alu -5 306 35 2249 50 0 0 chr2 101908489 101908747 -148779107 - AluY SINE Alu -53 258 1 2026 118 154 37 chr2 101908747 101908951 -148778903 - MSTA LTR MaLR -154 274 1 3623 119 62 20 chr2 101908951 101909501 -148778353 + LTR8A LTR ERV1 148 727 0 248 306 41 20 chr2 101909639 101909786 -148778068 + L1MC5 LINE L1 7645 7794 -167 180 111 0 0 chr2 101909915 101909942 -148777912 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 189 0 0 0 chr2 101909954 101909975 -148777879 + (A)n Simple_repeat Simple_repeat 1 21 0 254 246 0 49 chr2 101910400 101910461 -148777393 + MIR3 SINE MIR 124 181 -27 1569 176 32 35 chr2 101910565 101910878 -148776976 - AluJo SINE Alu 0 312 1 2662 46 0 3 chr2 101910881 101911186 -148776668 - AluY SINE Alu -7 304 1 1625 190 31 7 chr2 101911989 101912278 -148775576 - AluJb SINE Alu -16 296 1 2178 143 0 0 chr2 101913061 101913362 -148774492 + AluSx SINE Alu 3 303 -9 1827 195 13 13 chr2 101913768 101914157 -148773697 + L1MB3 LINE L1 5787 6175 -8 1697 146 33 57 chr2 101915829 101916130 -148771724 + AluJb SINE Alu 1 294 -18 1343 75 0 0 chr2 101917130 101917290 -148770564 + AluSx SINE Alu 1 160 -152 25 0 0 0 chr2 101919152 101919177 -148768677 + AT_rich Low_complexity Low_complexity 1 25 0 344 281 44 9 chr2 101919344 101919458 -148768396 - MER5B DNA MER1_type -4 174 57 1851 120 24 58 chr2 101920231 101920565 -148767289 - AluSx SINE Alu 0 324 1 677 248 69 25 chr2 101920653 101920855 -148766999 + MIR SINE MIR 46 256 -6 187 341 103 0 chr2 101922961 101923087 -148764767 - L2 LINE L2 -1 3271 3133 2210 116 0 22 chr2 101923435 101923746 -148764108 - AluSx SINE Alu -8 304 1 218 227 67 27 chr2 101923845 101923920 -148763934 + MER5A DNA MER1_type 4 81 -108 2143 79 72 0 chr2 101924098 101924375 -148763479 - AluY SINE Alu -14 297 1 2811 69 0 28 chr2 101926023 101926413 -148761441 - L1PA8 LINE L1 0 6172 5794 1461 215 24 0 chr2 101926459 101926747 -148761107 - MER7A DNA MER2_type 0 346 54 823 196 0 0 chr2 101928029 101928167 -148759687 + FRAM SINE Alu 29 166 -10 255 217 31 137 chr2 101928739 101928786 -148759068 - MER104 DNA Tc2 -1721 177 127 2254 113 3 19 chr2 101928786 101929096 -148758758 - AluSq SINE Alu -8 305 1 255 217 31 137 chr2 101929096 101929209 -148758645 - MER104 DNA Tc2 -1771 127 34 2364 81 7 0 chr2 101929878 101930175 -148757679 + AluSg SINE Alu 2 300 -10 257 256 37 12 chr2 101930220 101930302 -148757552 - MER5C DNA MER1_type -7 317 234 341 286 25 17 chr2 101930333 101930452 -148757402 - MER5C DNA MER1_type -200 124 5 2304 117 0 0 chr2 101930811 101931118 -148756736 - AluSx SINE Alu -5 307 1 729 252 127 46 chr2 101933026 101933507 -148754347 - MLT1G1 LTR MaLR -3 592 73 2150 95 16 9 chr2 101934986 101935302 -148752552 - L1PB2 LINE L1 0 6151 5834 258 32 0 0 chr2 101935498 101935529 -148752325 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 495 322 105 27 chr2 101935569 101935827 -148752027 - L2 LINE L2 -9 3263 2986 2298 89 3 52 chr2 101936478 101936805 -148751049 - AluSq SINE Alu -2 311 1 2287 96 0 37 chr2 101937422 101937746 -148750108 - AluSx SINE Alu 0 312 1 185 333 0 18 chr2 101937876 101937933 -148749921 + MIR SINE MIR 45 100 -108 200 0 100 0 chr2 101939947 101939977 -148747877 + T-rich Low_complexity Low_complexity 1 33 0 259 260 48 10 chr2 101941354 101941458 -148746396 + L1MC5 LINE L1 7796 7903 -58 686 139 24 0 chr2 101942089 101942254 -148745600 + (TCCA)n Simple_repeat Simple_repeat 2 170 0 226 273 0 0 chr2 101942254 101942320 -148745534 + CT-rich Low_complexity Low_complexity 3 68 0 196 328 151 42 chr2 101942326 101942445 -148745409 - L2 LINE L2 0 3272 3141 215 154 0 19 chr2 101942523 101942575 -148745279 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 522 264 65 65 chr2 101942639 101942870 -148744984 - MIR SINE MIR -2 260 30 21 0 0 0 chr2 101943616 101943637 -148744217 + AT_rich Low_complexity Low_complexity 1 21 0 2183 133 3 0 chr2 101943908 101944210 -148743644 - AluSx SINE Alu -8 304 2 317 386 0 0 chr2 101944804 101944936 -148742918 + L2 LINE L2 3140 3271 -1 229 317 0 22 chr2 101945785 101945965 -148741889 + C-rich Low_complexity Low_complexity 5 180 0 209 294 88 0 chr2 101946222 101946290 -148741564 - L2 LINE L2 -56 3216 3143 962 270 175 12 chr2 101946591 101946991 -148740863 - L2 LINE L2 -2 3311 2847 241 255 0 92 chr2 101946990 101947088 -148740766 - L2 LINE L2 -5 3267 3179 * 189 304 71 125 chr2 101948735 101948919 -148738935 - MIR SINE MIR -56 206 33 1669 72 0 14 chr2 101949193 101949401 -148738453 + AluSx SINE Alu 1 205 -107 483 170 25 2 chr2 101949459 101949574 -148738280 + MSTA LTR MaLR 14 137 -238 524 196 45 89 chr2 101950105 101950217 -148737637 - L1M4 LINE L1 -881 5265 5162 2305 98 0 13 chr2 101950217 101950523 -148737331 - AluY SINE Alu -9 302 1 524 196 45 89 chr2 101950523 101950589 -148737265 - L1M4 LINE L1 -984 5162 5095 21 0 0 0 chr2 101953408 101953429 -148734425 + AT_rich Low_complexity Low_complexity 1 21 0 2159 122 3 3 chr2 101954378 101954682 -148733172 - AluSq SINE Alu -9 304 1 293 263 77 88 chr2 101956238 101956535 -148731319 - L1MC4 LINE L1 -980 7062 6769 2431 57 0 0 chr2 101957837 101958120 -148729734 + AluY SINE Alu 22 304 -7 378 208 38 38 chr2 101958518 101958624 -148729230 - HAL1 LINE L1 -1111 1396 1291 836 228 166 9 chr2 101958624 101958944 -148728910 + HAL1 LINE L1 1389 1758 -749 199 216 27 0 chr2 101959725 101959762 -148728092 - L3b LINE CR1 -102 1481 1444 267 281 81 30 chr2 101960227 101960389 -148727465 + L2 LINE L2 2503 2676 -638 581 77 0 0 chr2 101960604 101960702 -148727152 - AluSc SINE Alu 0 299 202 256 320 68 0 chr2 101960734 101960837 -148727017 + L2 LINE L2 3043 3152 -161 304 216 81 0 chr2 101961314 101961388 -148726466 + MER6 DNA MER2_type 782 861 -4 193 274 126 11 chr2 101961733 101961828 -148726026 - L2 LINE L2 -260 3053 2948 373 246 173 31 chr2 101961949 101962140 -148725714 + MER20 DNA MER1_type 2 219 0 1769 128 24 7 chr2 101962608 101962896 -148724958 - AluSq SINE Alu -15 298 6 807 214 28 42 chr2 101963135 101963420 -148724434 - AluSq SINE Alu -26 287 7 189 211 0 0 chr2 101964366 101964404 -148723450 + MER5B DNA MER1_type 141 178 0 1327 218 24 13 chr2 101966349 101966647 -148721207 + AluSp SINE Alu 1 301 -2 737 99 0 0 chr2 101966930 101967031 -148720823 + AluS SINE Alu 2 102 -210 2172 107 0 3 chr2 101967162 101967471 -148720383 - AluSx SINE Alu -4 308 1 694 308 84 47 chr2 101968188 101968428 -148719426 + L1MC4a LINE L1 5298 5528 -2280 2325 95 0 0 chr2 101968428 101968732 -148719122 - AluSq SINE Alu -9 304 1 694 308 84 47 chr2 101968732 101969167 -148718687 + L1MC4a LINE L1 5528 5998 -1810 1956 118 30 10 chr2 101969236 101969541 -148718313 - AluSx SINE Alu -1 311 1 186 43 0 0 chr2 101970212 101970235 -148717619 + (A)n Simple_repeat Simple_repeat 1 23 0 2404 41 0 17 chr2 101970627 101970919 -148716935 - AluY SINE Alu -12 299 13 2195 95 3 0 chr2 101971408 101971703 -148716151 + AluSg SINE Alu 1 296 -14 2733 191 75 29 chr2 101972864 101973518 -148714336 + L1MB8 LINE L1 5495 6178 0 6331 136 98 7 chr2 101975784 101976418 -148711436 - Tigger3b DNA MER2_type -1798 1230 655 7285 45 2 4 chr2 101976418 101977895 -148709959 + L1PA3 LINE L1 4679 6155 0 6331 136 98 7 chr2 101977895 101978386 -148709468 - Tigger3b DNA MER2_type -2373 655 3 2357 60 0 17 chr2 101980594 101980896 -148706958 + AluY SINE Alu 1 297 -14 21 0 0 0 chr2 101980947 101980968 -148706886 + AT_rich Low_complexity Low_complexity 1 21 0 327 107 27 40 chr2 101980975 101981050 -148706804 + L1MD3 LINE L1 7922 7995 0 215 31 31 0 chr2 101981132 101981164 -148706690 + (ATG)n Simple_repeat Simple_repeat 2 34 0 774 256 0 0 chr2 101981546 101981706 -148706148 + Tigger7 DNA MER2_type 108 267 -466 505 146 0 97 chr2 101981704 101981807 -148706047 + Tigger7 DNA MER2_type 2393 2485 -6 * 356 223 53 11 chr2 101982213 101982307 -148705547 + MER5A DNA MER1_type 85 182 -7 441 125 0 0 chr2 101983525 101983597 -148704257 - L1MB3 LINE L1 0 6183 6112 1526 122 4 8 chr2 101983668 101983905 -148703949 + AluSx SINE Alu 1 236 -76 193 229 100 14 chr2 101985734 101985804 -148702050 - MIR SINE MIR -93 169 94 2058 103 13 17 chr2 101987040 101987341 -148700513 + AluSx SINE Alu 1 300 -12 2492 218 91 17 chr2 101987862 101988958 -148698896 + L1ME2 LINE L1 4871 6049 -115 182 308 0 19 chr2 101989418 101989470 -148698384 + L2 LINE L2 2566 2616 -698 550 272 134 68 chr2 101989480 101990025 -148697829 - L1MEd LINE L1 -5527 592 12 1807 77 8 0 chr2 101991054 101991288 -148696566 - AluSc SINE Alu -17 292 57 2088 99 0 3 chr2 101991813 101992096 -148695758 + AluSx SINE Alu 1 282 -30 180 254 0 0 chr2 101992530 101992589 -148695265 + (TG)n Simple_repeat Simple_repeat 1 59 0 182 269 75 0 chr2 101994270 101994337 -148693517 - L2 LINE L2 -57 3215 3144 1907 192 55 0 chr2 101996739 101997176 -148690678 + L1MB3 LINE L1 5723 6183 0 673 140 9 9 chr2 101997292 101997406 -148690448 + FLAM_C SINE Alu 25 138 -5 2249 103 0 0 chr2 101998391 101998701 -148689153 - AluSx SINE Alu -2 310 1 3576 158 20 28 chr2 101998969 101999654 -148688200 + L1MB7 LINE L1 5489 6168 -16 218 247 14 27 chr2 101999656 101999674 -148688180 + MIR SINE MIR 191 208 -54 1871 139 3 3 chr2 101999674 101999968 -148687886 + AluJb SINE Alu 1 294 -18 218 247 14 27 chr2 101999968 102000022 -148687832 + MIR SINE MIR 208 262 0 22 0 0 0 chr2 102000028 102000050 -148687804 + AT_rich Low_complexity Low_complexity 1 22 0 205 282 35 59 chr2 102000396 102000481 -148687373 + MIR SINE MIR 109 191 -71 2243 95 7 0 chr2 102001591 102001896 -148685958 + AluSq SINE Alu 1 307 -6 1836 114 7 0 chr2 102002683 102002954 -148684900 - AluSg SINE Alu -13 297 25 728 90 27 18 chr2 102003380 102003491 -148684363 - AluY SINE Alu -198 113 2 4103 108 7 13 chr2 102004129 102004731 -148683123 - L1PA13 LINE L1 -19 6144 5547 2161 114 1 11 chr2 102004733 102005225 -148682629 + L1PA13 LINE L1 5054 5542 -619 1353 124 0 0 chr2 102005845 102006039 -148681815 - AluSg/x SINE Alu -15 297 104 220 235 41 92 chr2 102006478 102006576 -148681278 - L2 LINE L2 -213 3059 2967 216 244 44 56 chr2 102006939 102007029 -148680825 + L2 LINE L2 3180 3268 -4 258 300 9 73 chr2 102007887 102007997 -148679857 + MIR3 SINE MIR 11 113 -95 2448 71 3 0 chr2 102008039 102008347 -148679507 - AluSp SINE Alu -4 309 1 1834 124 39 3 chr2 102008475 102008758 -148679096 + AluSx SINE Alu 3 295 -17 827 175 7 0 chr2 102009218 102009355 -148678499 + FAM SINE Alu 26 163 -22 2293 49 31 0 chr2 102009572 102009860 -148677994 - AluY SINE Alu -14 297 1 1167 226 62 94 chr2 102010420 102010908 -148676946 + MER34B LTR ERV1 1 468 -97 2053 151 7 0 chr2 102010908 102011212 -148676642 + AluJb SINE Alu 1 306 -6 1167 226 62 94 chr2 102011212 102011307 -148676547 + MER34B LTR ERV1 468 565 0 2384 74 3 10 chr2 102012262 102012571 -148675283 - AluY SINE Alu -4 307 1 21 0 0 0 chr2 102012576 102012597 -148675257 + AT_rich Low_complexity Low_complexity 1 21 0 2414 68 3 0 chr2 102013023 102013316 -148674538 + AluY SINE Alu 1 294 -17 216 265 0 0 chr2 102014015 102014064 -148673790 + L2 LINE L2 3203 3251 -21 2210 128 0 0 chr2 102014270 102014575 -148673279 + AluSx SINE Alu 1 305 -7 2123 110 17 0 chr2 102016014 102016304 -148671550 - AluSg SINE Alu -15 295 1 259 176 0 39 chr2 102017217 102017268 -148670586 - MER112 DNA MER1_type -211 49 1 1555 201 50 12 chr2 102017442 102017785 -148670069 + MLT1B LTR MaLR 1 356 -34 468 254 21 75 chr2 102019240 102019366 -148668488 + L1MEc LINE L1 829 938 -5458 2079 109 7 14 chr2 102019366 102019679 -148668175 + AluSx SINE Alu 4 314 0 468 254 21 75 chr2 102019679 102019791 -148668063 + L1MEc LINE L1 938 1055 -5341 910 167 0 31 chr2 102019920 102020028 -148667826 - Tigger1 DNA MER2_type 0 2418 2315 2225 112 7 7 chr2 102020028 102020333 -148667521 + AluSg SINE Alu 1 305 -5 910 167 0 31 chr2 102020333 102020386 -148667468 - Tigger1 DNA MER2_type -103 2315 2262 5081 117 44 44 chr2 102020770 102021637 -148666217 - Tigger1 DNA MER2_type 0 2418 1552 2289 99 0 3 chr2 102022080 102022382 -148665472 + AluSq SINE Alu 1 301 -12 2086 115 21 0 chr2 102022382 102022668 -148665186 + AluSg SINE Alu 1 292 -18 2353 78 3 0 chr2 102022668 102022978 -148664876 + AluSp SINE Alu 1 311 0 1537 111 35 18 chr2 102023198 102023320 -148664534 + MER30 DNA MER1_type 1 130 -100 2226 113 7 0 chr2 102023320 102023621 -148664233 - AluSx SINE Alu -9 303 1 1537 111 35 18 chr2 102023621 102023724 -148664130 + MER30 DNA MER1_type 130 230 0 1510 242 109 35 chr2 102023749 102023892 -148663962 + HAL1b LINE L1 509 640 -708 2209 117 0 19 chr2 102023892 102024200 -148663654 + AluSp SINE Alu 1 302 -11 1510 242 109 35 chr2 102024200 102024797 -148663057 + HAL1b LINE L1 640 1304 -44 2160 96 31 3 chr2 102024830 102025122 -148662732 - AluSg SINE Alu -10 300 1 1608 163 32 11 chr2 102025126 102025408 -148662446 - AluJo SINE Alu -24 288 1 239 206 82 62 chr2 102025484 102025581 -148662273 + L1ME4a LINE L1 5966 6064 -57 713 150 38 30 chr2 102025604 102025737 -148662117 + AluSx SINE Alu 2 135 -178 23 0 0 0 chr2 102026457 102026480 -148661374 + AT_rich Low_complexity Low_complexity 1 23 0 509 184 9 0 chr2 102026507 102026621 -148661233 + G-rich Low_complexity Low_complexity 2 116 0 728 248 13 43 chr2 102027206 102027436 -148660418 + MIR SINE MIR 23 245 -17 2413 88 0 7 chr2 102027537 102027845 -148660009 + AluSq SINE Alu 1 306 -7 1729 175 3 3 chr2 102027980 102028271 -148659583 + AluJo SINE Alu 1 291 -21 2300 230 75 13 chr2 102028450 102029446 -148658408 - L1MC4 LINE L1 -149 7893 6960 2593 131 43 12 chr2 102029446 102029867 -148657987 + Tigger2a DNA MER2_type 1 434 0 234 105 0 0 chr2 102029877 102029915 -148657939 + (CATA)n Simple_repeat Simple_repeat 3 40 0 2300 230 75 13 chr2 102029915 102030091 -148657763 - L1MC4 LINE L1 -1090 6952 6483 1178 136 0 12 chr2 102030094 102030263 -148657591 + AluSx SINE Alu 129 295 -17 1681 146 56 0 chr2 102030263 102030530 -148657324 - AluSx SINE Alu -30 282 1 1410 227 36 78 chr2 102031289 102031793 -148656061 + L1MC3 LINE L1 3 348 -5697 3599 22 0 5 chr2 102031793 102032206 -148655648 - L1PA4 LINE L1 -8 6147 5737 1410 227 36 78 chr2 102032206 102032600 -148655254 + L1MC3 LINE L1 348 757 -5288 806 182 0 7 chr2 102032616 102032759 -148655095 - FLAM_C SINE Alu -1 142 1 2922 225 77 55 chr2 102032759 102034121 -148653733 + L1MC3 LINE L1 747 2334 -4411 1313 205 43 63 chr2 102034121 102034424 -148653430 + AluJo SINE Alu 1 297 -15 2922 225 77 55 chr2 102034424 102034658 -148653196 + L1MC3 LINE L1 2334 2561 -4184 1846 134 52 0 chr2 102034658 102034927 -148652927 + AluSq SINE Alu 11 293 -20 18621 106 6 11 chr2 102034928 102038545 -148649309 + L1PA8A LINE L1 2507 6104 -27 327 85 0 0 chr2 102038571 102038618 -148649236 + (GGGGA)n Simple_repeat Simple_repeat 5 51 0 728 192 40 152 chr2 102038622 102038709 -148649145 + L1MC3 LINE L1 2520 2615 -3949 2152 116 10 10 chr2 102038709 102039010 -148648844 + AluSx SINE Alu 1 301 -11 728 192 40 152 chr2 102039010 102039298 -148648556 + L1MC3 LINE L1 2615 2819 -3745 765 102 110 16 chr2 102039299 102039426 -148648428 + FLAM_C SINE Alu 2 140 -3 5115 209 54 50 chr2 102039428 102039921 -148647933 + L1MC3 LINE L1 3938 4428 -2136 2584 65 0 3 chr2 102039921 102040229 -148647625 - AluY SINE Alu -4 307 1 5115 209 54 50 chr2 102040229 102041271 -148646583 + L1MC3 LINE L1 4428 5464 -1100 2239 93 6 35 chr2 102041271 102041583 -148646271 + AluSq SINE Alu 1 303 -10 5115 209 54 50 chr2 102041583 102041931 -148645923 + L1MC3 LINE L1 5464 4818 -1746 1598 105 5 9 chr2 102041931 102042150 -148645704 + AluSg/x SINE Alu 82 299 -11 5115 209 54 50 chr2 102042150 102043143 -148644711 + L1MC3 LINE L1 4817 5805 -759 1422 184 0 25 chr2 102043143 102043387 -148644467 + Tigger5 DNA MER2_type 1 238 -2085 * 1586 113 8 8 chr2 102043373 102043612 -148644242 + Tigger5 DNA MER2_type 2083 2321 -2 943 197 11 0 chr2 102043613 102043796 -148644058 + L1MC3 LINE L1 6824 7008 -1195 1318 161 14 15 chr2 102043796 102044034 -148643820 + MLT2B3 LTR ERVL 1 228 -225 265 114 91 0 chr2 102044007 102044051 -148643803 + MLT2B1 LTR ERVL 473 520 0 * 1358 125 63 96 chr2 102044051 102044354 -148643500 + L1MC3 LINE L1 7004 7296 -907 680 153 51 0 chr2 102044335 102044453 -148643401 + L1MC3 LINE L1 7598 7721 -482 * 1042 152 18 0 chr2 102044453 102044618 -148643236 + FRAM SINE Alu 1 167 -9 193 29 59 0 chr2 102044618 102044652 -148643202 + (GGGGA)n Simple_repeat Simple_repeat 4 39 0 1635 139 116 10 chr2 102044652 102044953 -148642901 + L1MC3 LINE L1 7708 8040 -163 856 208 199 84 chr2 102044953 102045406 -148642448 - MLT1D LTR MaLR 0 505 1 840 184 0 36 chr2 102045406 102045574 -148642280 + L1MC3 LINE L1 8036 8197 -6 600 194 183 104 chr2 102046130 102046496 -148641358 - MLT1D LTR MaLR -110 395 1 840 184 0 36 chr2 102046496 102046664 -148641190 + L1MC3 LINE L1 8036 8197 -6 269 220 66 22 chr2 102047043 102047134 -148640720 + L1MC4 LINE L1 7857 7951 -91 2122 101 19 29 chr2 102048326 102048633 -148639221 + AluSq SINE Alu 1 304 -9 756 176 36 18 chr2 102049390 102049555 -148638299 + L1MB3 LINE L1 6016 6183 0 359 234 117 28 chr2 102050817 102050962 -148636892 - L1ME4a LINE L1 0 6121 5964 212 279 0 16 chr2 102051988 102052049 -148635805 + L2 LINE L2 3246 3305 -8 1994 161 0 0 chr2 102053099 102053391 -148634463 + AluSx SINE Alu 2 293 -19 354 278 56 14 chr2 102053949 102054093 -148633761 + MIR SINE MIR 43 192 -70 845 191 30 186 chr2 102054157 102054274 -148633580 + MLT1C LTR MaLR 21 155 -312 2103 132 3 3 chr2 102054274 102054570 -148633284 - AluSx SINE Alu -16 296 1 845 191 30 186 chr2 102054570 102054882 -148632972 + MLT1C LTR MaLR 155 428 -39 2477 59 3 7 chr2 102055198 102055503 -148632351 - AluY SINE Alu -7 304 1 189 0 0 0 chr2 102055503 102055524 -148632330 + (T)n Simple_repeat Simple_repeat 1 21 0 1213 145 3 131 chr2 102055899 102056043 -148631811 + L1 LINE L1 4115 4276 -1870 2535 63 0 3 chr2 102056043 102056343 -148631511 + AluY SINE Alu 1 299 -12 1644 160 3 21 chr2 102056351 102056638 -148631216 + AluJb SINE Alu 1 282 -30 1213 145 3 131 chr2 102056638 102056781 -148631073 + L1 LINE L1 4283 4373 -1773 380 158 233 14 chr2 102057158 102057304 -148630550 - MER5B DNA MER1_type 0 178 1 354 230 216 14 chr2 102057966 102058114 -148629740 - MER5B DNA MER1_type 0 178 1 1222 182 64 8 chr2 102059105 102059341 -148628513 - MLT1A1 LTR MaLR -116 249 1 2132 121 0 0 chr2 102059412 102059694 -148628160 + AluSx SINE Alu 1 282 -30 267 111 0 0 chr2 102059700 102059745 -148628109 - AluSc SINE Alu -1 298 254 9037 45 11 2 chr2 102059845 102060958 -148626896 - L1P LINE L1 -842 5304 4182 2267 100 7 0 chr2 102061059 102061358 -148626496 - AluSx SINE Alu -7 305 5 613 181 0 65 chr2 102061513 102061615 -148626239 + MER53 DNA DNA 1 91 -98 1997 106 7 20 chr2 102061615 102061916 -148625938 - AluSx SINE Alu -15 297 1 613 181 0 65 chr2 102061916 102061968 -148625886 + MER53 DNA DNA 91 145 -44 1001 178 21 0 chr2 102062350 102062541 -148625313 + AluSx SINE Alu 1 195 -117 809 154 15 8 chr2 102062980 102063110 -148624744 + FRAM SINE Alu 1 130 -46 853 148 0 0 chr2 102063128 102063263 -148624591 - L1 LINE L1 -1895 4251 4117 449 248 26 130 chr2 102063658 102063928 -148623926 - MER21B LTR ERV1 -406 457 216 205 162 0 0 chr2 102065292 102065329 -148622525 + (CA)n Simple_repeat Simple_repeat 2 38 0 1910 168 70 48 chr2 102065855 102066272 -148621582 - MSTB LTR MaLR 0 426 1 2088 125 0 3 chr2 102066943 102067254 -148620600 + AluSg SINE Alu 1 310 0 816 160 0 0 chr2 102067437 102067568 -148620286 - FRAM SINE Alu -23 153 23 219 216 102 57 chr2 102067612 102067700 -148620154 - MIR3 SINE MIR -32 176 85 228 336 60 47 chr2 102067815 102067964 -148619890 - MIR SINE MIR -8 254 104 2824 145 59 47 chr2 102068426 102069006 -148618848 + L1MB3 LINE L1 5590 6176 -7 1847 135 6 19 chr2 102069018 102069329 -148618525 - AluSx SINE Alu -5 307 1 2325 80 0 0 chr2 102069519 102069821 -148618033 + AluY SINE Alu 8 309 -2 267 271 35 24 chr2 102069857 102069942 -148617912 + MIR3 SINE MIR 90 175 -33 401 216 69 52 chr2 102070601 102070717 -148617137 + L2 LINE L2 3189 3306 -7 207 0 0 0 chr2 102070947 102070970 -148616884 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 747 181 0 0 chr2 102070974 102071090 -148616764 - FLAM_A SINE Alu -17 116 1 2143 74 10 10 chr2 102071119 102071415 -148616439 + AluSp SINE Alu 1 296 -17 2225 96 0 3 chr2 102071421 102071723 -148616131 + AluY SINE Alu 1 301 -10 407 259 87 99 chr2 102071941 102072435 -148615419 - L1MC4 LINE L1 0 8042 7555 1804 132 0 37 chr2 102072484 102072779 -148615075 - AluJo SINE Alu -19 293 10 1369 54 0 0 chr2 102072896 102073064 -148614790 + AluSg/x SINE Alu 131 298 -14 246 269 0 0 chr2 102073260 102073312 -148614542 + polypyrimidine Low_complexity Low_complexity 1 52 0 1623 189 40 3 chr2 102073312 102073613 -148614241 - MLT1A1 LTR MaLR 0 365 54 342 116 0 87 chr2 102073616 102073685 -148614169 - THE1C LTR MaLR 0 375 313 1563 130 81 45 chr2 102073787 102074095 -148613759 - THE1C LTR MaLR -56 319 1 252 140 18 53 chr2 102074095 102074152 -148613702 - MLT1A1 LTR MaLR -310 55 1 305 47 23 0 chr2 102074152 102074195 -148613659 + (TC)n Simple_repeat Simple_repeat 2 45 0 342 0 0 0 chr2 102074195 102074233 -148613621 + (CA)n Simple_repeat Simple_repeat 1 38 0 1479 219 34 48 chr2 102074420 102074799 -148613055 - MLT1A2 LTR MaLR 0 374 1 2395 68 0 0 chr2 102074889 102075197 -148612657 + AluSg SINE Alu 1 308 -2 2092 154 59 46 chr2 102075835 102075877 -148611977 + MSTB1 LTR MaLR 8 48 -384 1382 132 118 4 chr2 102075877 102076149 -148611705 - AluJb SINE Alu -9 303 1 2092 154 59 46 chr2 102076149 102076496 -148611358 + MSTB1 LTR MaLR 48 402 -30 21 0 0 0 chr2 102076814 102076835 -148611019 + AT_rich Low_complexity Low_complexity 1 21 0 2250 84 7 0 chr2 102077026 102077323 -148610531 - AluSp SINE Alu -7 306 8 2150 50 0 0 chr2 102077323 102077583 -148610271 - AluY SINE Alu -25 286 27 2338 118 129 3 chr2 102077883 102078263 -148609591 - MSTA LTR MaLR 0 428 1 2641 215 131 33 chr2 102078327 102079058 -148608796 - MER21B LTR ERV1 -60 803 1 180 184 26 0 chr2 102079635 102079673 -148608181 + L2 LINE L2 2325 2363 -951 376 288 20 34 chr2 102079676 102079822 -148608032 + L2 LINE L2 2925 3068 -245 1489 273 68 39 chr2 102080571 102080758 -148607096 - HAL1 LINE L1 -6 2501 2321 2118 110 7 0 chr2 102080758 102081058 -148606796 - AluSq SINE Alu -11 302 1 1489 273 68 39 chr2 102081058 102081562 -148606292 - HAL1 LINE L1 -186 2321 1790 231 36 0 0 chr2 102081800 102081828 -148606026 + (CA)n Simple_repeat Simple_repeat 1 28 0 331 295 44 16 chr2 102081845 102082057 -148605797 + L1ME3A LINE L1 5292 5511 -653 772 183 0 8 chr2 102082071 102082197 -148605657 - FLAM_A SINE Alu -8 125 1 405 227 182 9 chr2 102082290 102082400 -148605454 + MLT1I LTR MaLR 281 409 0 565 238 96 59 chr2 102082400 102082724 -148605130 + L1ME3A LINE L1 5622 5957 -213 2146 112 0 0 chr2 102083047 102083351 -148604503 - AluSg SINE Alu 0 310 7 1662 156 11 7 chr2 102083574 102083856 -148603998 - AluJo SINE Alu -28 284 2 237 333 80 7 chr2 102084137 102084275 -148603579 - L2 LINE L2 0 3313 3166 2213 87 3 7 chr2 102084651 102084960 -148602894 + AluSx SINE Alu 1 308 -4 391 165 0 0 chr2 102086075 102086140 -148601714 + L1M3 LINE L1 5517 5581 -595 212 345 58 75 chr2 102086142 102086316 -148601538 - MIR SINE MIR -89 173 3 2473 148 49 16 chr2 102086580 102087027 -148600827 - L1MA6 LINE L1 -5 6295 5834 500 122 0 122 chr2 102087028 102087126 -148600728 + AluJ/FLAM SINE Alu 2 87 -225 2915 152 25 68 chr2 102087126 102087730 -148600124 - L1MA6 LINE L1 -453 5847 5270 189 281 260 31 chr2 102088339 102088535 -148599319 - L2 LINE L2 0 3313 3073 208 314 102 8 chr2 102090210 102090328 -148597526 + MIR3 SINE MIR 71 199 -9 22 35 0 0 chr2 102090621 102090650 -148597204 + GC_rich Low_complexity Low_complexity 1 29 0 182 194 15 0 chr2 102090812 102090879 -148596975 + C-rich Low_complexity Low_complexity 3 70 0 220 250 113 40 chr2 102092011 102092135 -148595719 - L2 LINE L2 -3 3269 3137 680 243 111 33 chr2 102092330 102092573 -148595281 + MIR SINE MIR 1 262 0 553 250 58 17 chr2 102092739 102092911 -148594943 - LTR33 LTR ERVL -340 181 3 246 230 137 36 chr2 102092923 102092967 -148594887 + LTR33 LTR ERVL 367 405 -116 1648 188 25 50 chr2 102092967 102093367 -148594487 + MLT1B LTR MaLR 1 390 0 246 230 137 36 chr2 102093367 102093461 -148594393 + LTR33 LTR ERVL 405 519 -2 1580 171 7 14 chr2 102094377 102094669 -148593185 + AluJo SINE Alu 1 290 -22 1858 134 30 7 chr2 102094780 102095079 -148592775 - AluSx SINE Alu -5 307 2 2322 87 0 3 chr2 102095123 102095433 -148592421 - AluSx SINE Alu -3 309 1 1018 197 77 55 chr2 102095453 102095763 -148592091 + LTR37A LTR ERV1 110 426 0 2275 88 3 0 chr2 102095810 102096117 -148591737 + AluY SINE Alu 1 308 -3 890 110 0 29 chr2 102096152 102096288 -148591566 + FLAM_C SINE Alu 2 133 0 2013 127 10 0 chr2 102096316 102096623 -148591231 + AluSg SINE Alu 1 310 0 200 279 0 0 chr2 102097227 102097270 -148590584 + polypurine Low_complexity Low_complexity 6 48 0 2024 110 16 10 chr2 102097349 102097658 -148590196 - AluSx SINE Alu -1 311 1 23 33 0 0 chr2 102097769 102097799 -148590055 + AT_rich Low_complexity Low_complexity 1 30 0 1979 128 7 0 chr2 102098209 102098505 -148589349 + AluSx SINE Alu 1 298 -14 666 257 42 25 chr2 102098558 102098795 -148589059 - MIR SINE MIR -10 252 12 246 317 154 0 chr2 102098950 102099054 -148588800 + MIR SINE MIR 77 196 -66 335 99 25 62 chr2 102099491 102099523 -148588331 + L1MA1 LINE L1 6225 6257 -45 1547 186 0 24 chr2 102099523 102099819 -148588035 + AluJb SINE Alu 1 289 -23 335 99 25 62 chr2 102099819 102099867 -148587987 + L1MA1 LINE L1 6257 6302 0 2080 101 0 14 chr2 102100140 102100462 -148587392 - AluSg1 SINE Alu 0 309 1 1940 102 29 0 chr2 102100470 102100769 -148587085 - AluSx SINE Alu 0 307 1 1029 121 6 24 chr2 102100905 102101071 -148586783 - AluSg/x SINE Alu -16 294 132 189 0 0 0 chr2 102101626 102101647 -148586207 + (CA)n Simple_repeat Simple_repeat 2 22 0 2360 223 0 0 chr2 102102313 102102360 -148585494 + MSTB LTR MaLR 1 42 -390 2917 131 18 40 chr2 102102360 102102695 -148585159 + LTR45B LTR ERV1 3 344 -145 2224 101 0 3 chr2 102102695 102103002 -148584852 + AluSg SINE Alu 1 306 -4 2917 131 18 40 chr2 102103002 102103078 -148584776 + LTR45B LTR ERV1 344 404 -85 1855 141 3 10 chr2 102103078 102103375 -148584479 - AluSx SINE Alu -17 295 1 2917 131 18 40 chr2 102103375 102103460 -148584394 + LTR45B LTR ERV1 404 489 0 2360 223 0 0 chr2 102103460 102103807 -148584047 + MSTB LTR MaLR 42 390 -42 2225 112 0 3 chr2 102103807 102104120 -148583734 - AluSx SINE Alu 0 312 1 2360 223 0 0 chr2 102104120 102104166 -148583688 + MSTB LTR MaLR 390 430 -2 606 139 12 133 chr2 102104282 102104333 -148583521 - MER3 DNA MER1_type -4 205 149 1983 127 0 0 chr2 102104333 102104650 -148583204 - AluSx SINE Alu 0 317 1 606 139 12 133 chr2 102104650 102104762 -148583092 - MER3 DNA MER1_type -60 149 61 2018 90 7 10 chr2 102104917 102105207 -148582647 + AluSp SINE Alu 1 289 -24 922 213 50 0 chr2 102105436 102105676 -148582178 + AluSp SINE Alu 52 303 -10 2340 85 0 19 chr2 102105796 102106113 -148581741 - AluY SINE Alu 0 311 1 496 229 39 73 chr2 102106284 102106463 -148581391 + HAL1 LINE L1 10 182 -2325 870 142 0 8 chr2 102106612 102106746 -148581108 + FLAM_C SINE Alu 1 133 0 2733 121 34 2 chr2 102106824 102107239 -148580615 + MSTA LTR MaLR 1 428 0 7514 187 48 15 chr2 102107241 102108768 -148579086 + MSTA-int LTR MaLR 3 1580 0 1226 132 26 0 chr2 102108768 102108958 -148578896 + MSTA LTR MaLR 1 195 -233 1973 97 0 0 chr2 102108965 102109224 -148578630 - AluSx SINE Alu -53 259 1 2343 111 9 20 chr2 102109224 102109567 -148578287 + THE1B LTR MaLR 26 364 0 12163 87 4 1 chr2 102109567 102111143 -148576711 + THE1B-int LTR MaLR 1 1580 0 2024 128 10 116 chr2 102111143 102111550 -148576304 + THE1B LTR MaLR 1 364 0 625 147 0 0 chr2 102111552 102111647 -148576207 + MSTA LTR MaLR 334 428 0 1172 251 23 47 chr2 102111648 102112163 -148575691 + HAL1 LINE L1 664 1166 -1341 518 126 23 0 chr2 102112172 102112259 -148575595 + AluS SINE Alu 223 311 -1 1509 229 66 94 chr2 102112260 102112497 -148575357 + HAL1 LINE L1 1183 1425 -1082 1384 172 15 103 chr2 102112497 102112621 -148575233 + AluJb SINE Alu 1 134 -178 44 0 0 0 chr2 102112621 102112665 -148575189 + AT_rich Low_complexity Low_complexity 1 44 0 2359 96 0 0 chr2 102112665 102112958 -148574896 + AluSc SINE Alu 1 293 -16 1384 172 15 103 chr2 102112958 102113120 -148574734 + AluJb SINE Alu 132 302 -10 1509 229 66 94 chr2 102113120 102113288 -148574566 + HAL1 LINE L1 1425 1596 -911 1796 191 0 3 chr2 102113288 102113586 -148574268 + AluJo SINE Alu 1 297 -15 1509 229 66 94 chr2 102113586 102113920 -148573934 + HAL1 LINE L1 1596 1902 -605 2127 127 0 3 chr2 102114126 102114417 -148573437 - AluJb SINE Alu -22 290 1 4032 78 0 4 chr2 102114554 102115067 -148572787 - MER9 LTR ERVK 0 511 1 1954 165 3 56 chr2 102115329 102115469 -148572385 + MLT1A1 LTR MaLR 9 155 -210 2223 121 13 0 chr2 102115469 102115776 -148572078 - AluSx SINE Alu -1 311 1 1954 165 3 56 chr2 102115776 102116010 -148571844 + MLT1A1 LTR MaLR 155 363 -2 809 175 93 43 chr2 102116130 102116387 -148571467 + LTR37B LTR ERV1 199 468 0 4013 133 32 5 chr2 102116556 102117174 -148570680 - MER41B LTR ERV1 0 635 1 2156 139 25 33 chr2 102117372 102117739 -148570115 - LTR26B LTR ERV1 0 531 168 894 199 6 0 chr2 102117739 102117895 -148569959 + AluJ SINE Alu 1 157 -155 779 115 0 0 chr2 102117895 102117999 -148569855 - LTR7 LTR ERV1 0 450 347 953 185 33 14 chr2 102118006 102118217 -148569637 - HERVH LTR ERV1 -7498 215 1 1374 146 90 127 chr2 102118218 102118684 -148569170 - LTR7 LTR ERV1 -1 449 1 878 150 14 7 chr2 102118684 102118824 -148569030 + AluJ SINE Alu 153 293 -19 406 136 0 0 chr2 102118825 102118884 -148568970 - LTR26E LTR ERV1 -362 260 202 2153 108 0 10 chr2 102118884 102119208 -148568646 - AluSp SINE Alu 0 321 1 562 159 159 16 chr2 102119215 102119341 -148568513 - MLT1B LTR MaLR -219 171 28 1887 140 10 17 chr2 102119344 102119644 -148568210 + AluJo SINE Alu 1 298 -14 333 0 0 0 chr2 102119877 102119914 -148567940 + (A)n Simple_repeat Simple_repeat 1 37 0 2333 120 0 0 chr2 102120255 102120564 -148567290 + AluSg SINE Alu 1 309 -1 4049 141 21 19 chr2 102120623 102121054 -148566800 - L1MB7 LINE L1 -5 6179 5744 2557 164 9 5 chr2 102121054 102121480 -148566374 - MSTA LTR MaLR 0 428 1 4049 141 21 19 chr2 102121480 102121750 -148566104 - L1MB7 LINE L1 -440 5744 5476 1008 190 0 0 chr2 102121754 102121912 -148565942 - AluJo SINE Alu -48 264 107 1725 142 0 4 chr2 102121920 102122166 -148565688 + AluSx SINE Alu 37 281 -31 880 144 0 0 chr2 102122187 102122312 -148565542 - AluJo SINE Alu -187 125 1 3938 189 41 38 chr2 102122312 102122534 -148565320 - L1MB7 LINE L1 -694 5490 5270 1350 196 92 33 chr2 102122534 102122733 -148565121 - MLT1B LTR MaLR 0 390 204 2439 92 0 0 chr2 102122733 102123039 -148564815 - AluY SINE Alu -5 306 1 2236 109 13 0 chr2 102123039 102123342 -148564512 - AluSq SINE Alu -6 307 1 1350 196 92 33 chr2 102123342 102123509 -148564345 - MLT1B LTR MaLR -185 205 1 3938 189 41 38 chr2 102123509 102124042 -148563812 - L1MB7 LINE L1 -914 5270 4734 2317 76 3 3 chr2 102124042 102124333 -148563521 + AluY SINE Alu 1 291 -20 3938 189 41 38 chr2 102124333 102124693 -148563161 - L1MB7 LINE L1 -1450 4734 4377 861 140 7 29 chr2 102124726 102124862 -148562992 - FLAM_C SINE Alu 0 133 1 395 85 34 0 chr2 102125876 102125935 -148561919 - MER4E LTR ERV1 0 779 719 2049 176 81 25 chr2 102125938 102126371 -148561483 - LTR2B LTR ERV1 -3 487 31 4781 127 48 52 chr2 102126388 102127238 -148560616 - MER4D LTR ERV1 -56 847 1 2778 81 11 3 chr2 102127526 102127898 -148559956 + THE1C LTR MaLR 1 375 0 22 70 0 0 chr2 102128145 102128188 -148559666 + AT_rich Low_complexity Low_complexity 1 43 0 1551 188 0 0 chr2 102128190 102128445 -148559409 - AluJo SINE Alu -57 255 1 926 281 55 29 chr2 102128780 102129197 -148558657 + MLT1J1 LTR MaLR 4 431 -15 3861 159 76 5 chr2 102129287 102129929 -148557925 + MER21B LTR ERV1 1 688 -175 697 206 29 41 chr2 102129931 102130101 -148557753 - MER4D LTR ERV1 0 903 736 2088 139 0 3 chr2 102130202 102130497 -148557357 + AluSx SINE Alu 1 294 -18 324 0 0 0 chr2 102130497 102130533 -148557321 + (TA)n Simple_repeat Simple_repeat 2 37 0 209 189 0 0 chr2 102130655 102130692 -148557162 + C-rich Low_complexity Low_complexity 6 42 0 1541 189 20 10 chr2 102131447 102131753 -148556101 + AluJo SINE Alu 1 309 -3 259 82 0 41 chr2 102131756 102131805 -148556049 + (GAAA)n Simple_repeat Simple_repeat 3 49 0 1730 143 65 10 chr2 102131813 102132106 -148555748 - AluJb SINE Alu -3 309 1 2332 97 0 7 chr2 102132500 102132809 -148555045 - AluSc SINE Alu -2 307 1 1697 160 3 67 chr2 102133385 102133505 -148554349 + AluJo SINE Alu 1 127 -185 2469 70 3 3 chr2 102133505 102133805 -148554049 - AluY SINE Alu -11 300 1 1697 160 3 67 chr2 102133805 102133997 -148553857 + AluJo SINE Alu 127 293 -19 1122 134 6 0 chr2 102134105 102134269 -148553585 + AluSg/x SINE Alu 120 284 -28 243 191 73 0 chr2 102134580 102134648 -148553206 + MLT1K LTR MaLR 512 584 -4 307 164 203 55 chr2 102134856 102134984 -148552870 + L2 LINE L2 3165 3311 -2 697 144 0 32 chr2 102135048 102135173 -148552681 + FLAM_A SINE Alu 21 141 -1 2180 93 7 3 chr2 102135252 102135541 -148552313 + AluSx SINE Alu 5 294 -18 266 352 11 0 chr2 102135553 102135644 -148552210 - MIR3 SINE MIR -29 179 88 717 78 84 212 chr2 102135652 102135831 -148552023 + THE1B LTR MaLR 1 156 -208 1413 156 8 48 chr2 102135872 102136122 -148551732 + THE1B LTR MaLR 123 362 -2 451 95 0 0 chr2 102137465 102137528 -148550326 - MER92C LTR ERV1 0 554 492 371 168 6 204 chr2 102137643 102137810 -148550044 - MER92B LTR ERV1 -501 135 2 2592 50 0 3 chr2 102137972 102138275 -148549579 - AluY SINE Alu -9 302 1 1715 175 7 26 chr2 102138275 102138584 -148549270 - AluJo SINE Alu -9 303 1 780 150 8 0 chr2 102138589 102138709 -148549145 - FLAM_C SINE Alu -10 133 13 5074 163 12 30 chr2 102138774 102139641 -148548213 - L1MB7 LINE L1 -1 6183 5302 2190 127 0 13 chr2 102139641 102139957 -148547897 - AluSx SINE Alu 0 312 1 2504 84 0 0 chr2 102139961 102140272 -148547582 - AluY SINE Alu 0 311 1 5074 163 12 30 chr2 102140272 102140499 -148547355 - L1MB7 LINE L1 -885 5299 5099 626 242 68 53 chr2 102140596 102140860 -148546994 - MER93a LTR ERV1 0 402 135 1877 138 66 0 chr2 102140892 102141181 -148546673 + AluSx SINE Alu 2 309 -3 283 290 82 55 chr2 102141335 102141429 -148546425 - MLT1J2 LTR MaLR -262 188 98 2244 111 0 3 chr2 102141429 102141735 -148546119 - AluSq SINE Alu -8 305 1 283 290 82 55 chr2 102141735 102141823 -148546031 - MLT1J2 LTR MaLR -352 98 1 888 210 0 11 chr2 102143065 102143241 -148544613 + AluJb SINE Alu 137 310 -2 26 0 0 0 chr2 102143355 102143381 -148544473 + AT_rich Low_complexity Low_complexity 1 26 0 394 108 27 14 chr2 102143472 102143546 -148544308 + CT-rich Low_complexity Low_complexity 4 78 0 2103 120 7 7 chr2 102143549 102143857 -148543997 - AluSx SINE Alu -2 310 3 454 160 0 0 chr2 102144084 102144159 -148543695 + L1MB8 LINE L1 6098 6172 -6 1669 179 0 30 chr2 102144249 102144550 -148543304 - AluJo SINE Alu -20 292 1 2419 88 7 0 chr2 102144890 102145197 -148542657 - AluSx SINE Alu -3 309 1 1276 181 121 4 chr2 102145633 102145898 -148541956 + AluSp SINE Alu 5 300 -3 555 336 29 4 chr2 102146020 102146261 -148541593 - L2 LINE L2 -355 2959 2713 2245 91 3 14 chr2 102146470 102146767 -148541087 + AluSp SINE Alu 1 294 -19 2284 203 54 32 chr2 102146784 102146867 -148540987 - MER77 LTR ERV1 -4 601 521 1861 126 7 11 chr2 102146867 102147136 -148540718 - AluSx SINE Alu -15 297 30 2284 203 54 32 chr2 102147136 102147589 -148540265 - MER77 LTR ERV1 -84 521 53 2062 142 0 3 chr2 102147598 102147894 -148539960 - AluSx SINE Alu -17 295 1 317 250 98 18 chr2 102147960 102148072 -148539782 - L2 LINE L2 -602 2712 2592 242 189 0 0 chr2 102148098 102148151 -148539703 - MIR SINE MIR -26 236 184 6250 185 39 49 chr2 102148385 102150270 -148537584 - L1MA4 LINE L1 -14 6286 4449 2294 122 33 28 chr2 102150270 102150632 -148537222 + THE1B LTR MaLR 1 364 0 6250 185 39 49 chr2 102150632 102151538 -148536316 - L1MA4 LINE L1 -1851 4449 3536 2387 112 0 0 chr2 102151562 102151875 -148535979 - AluSq SINE Alu 0 313 1 2536 101 5 44 chr2 102152131 102152293 -148535561 + THE1C LTR MaLR 3 170 -205 2296 107 0 0 chr2 102152293 102152592 -148535262 - AluSc SINE Alu -10 299 1 2536 101 5 44 chr2 102152592 102152817 -148535037 + THE1C LTR MaLR 170 375 0 24 32 0 0 chr2 102152848 102152879 -148534975 + AT_rich Low_complexity Low_complexity 1 31 0 1146 140 10 70 chr2 102152886 102153086 -148534768 - AluJo SINE Alu -39 273 86 299 200 108 25 chr2 102153146 102153191 -148534663 + Charlie7 DNA MER1_type 2483 2523 -89 1759 104 43 127 chr2 102153191 102153356 -148534498 - MER46B DNA MER2_type -2496 235 244 1721 156 7 23 chr2 102153356 102153657 -148534197 - AluJo SINE Alu -5 307 12 1759 104 43 127 chr2 102153657 102153884 -148533970 - MER46B DNA MER2_type -2486 245 1 299 200 108 25 chr2 102153884 102153958 -148533896 + Charlie7 DNA MER1_type 2523 2612 0 187 353 35 17 chr2 102154166 102154282 -148533572 + L2 LINE L2 2472 2589 -725 680 301 152 28 chr2 102154403 102154981 -148532873 + HAL1 LINE L1 1684 2333 -174 256 294 15 0 chr2 102154993 102155061 -148532793 + MER5A DNA MER1_type 107 175 -14 477 182 136 76 chr2 102155376 102155508 -148532346 + AluJo SINE Alu 2 141 -171 2160 111 3 10 chr2 102155508 102155805 -148532049 + AluSx SINE Alu 1 295 -17 348 161 48 0 chr2 102155805 102155867 -148531987 + Charlie1 DNA MER1_type 2270 2334 -427 796 192 0 45 chr2 102155887 102156043 -148531811 + AluJo SINE Alu 124 272 -40 2070 126 10 10 chr2 102156143 102156444 -148531410 + AluSx SINE Alu 1 301 -11 700 184 46 141 chr2 102156449 102156732 -148531122 + L1MC3 LINE L1 2146 2401 -3745 765 102 110 16 chr2 102156733 102156860 -148530994 + FLAM_C SINE Alu 2 140 -3 5432 203 54 49 chr2 102156862 102157355 -148530499 + L1MC3 LINE L1 3520 4009 -2137 2584 65 0 3 chr2 102157355 102157663 -148530191 - AluY SINE Alu -4 307 1 5432 203 54 49 chr2 102157663 102158705 -148529149 + L1MC3 LINE L1 4009 5044 -1102 2225 93 6 35 chr2 102158705 102159016 -148528838 + AluSq SINE Alu 1 302 -11 5432 203 54 49 chr2 102159016 102159361 -148528493 + L1MC3 LINE L1 5044 4402 -1744 1598 105 5 9 chr2 102159361 102159580 -148528274 + AluSg/x SINE Alu 82 299 -11 5432 203 54 49 chr2 102159580 102160573 -148527281 + L1MC3 LINE L1 4401 5387 -759 1422 184 0 25 chr2 102160573 102160817 -148527037 + Tigger5 DNA MER2_type 1 238 -2085 * 1568 117 8 8 chr2 102160803 102161042 -148526812 + Tigger5 DNA MER2_type 2083 2321 -2 943 197 11 0 chr2 102161043 102161226 -148526628 + L1MC3 LINE L1 6406 6590 -1195 1336 157 14 15 chr2 102161226 102161464 -148526390 + MLT2B3 LTR ERVL 1 228 -225 265 114 91 0 chr2 102161437 102161481 -148526373 + MLT2B1 LTR ERVL 473 520 0 * 1358 125 63 96 chr2 102161481 102161784 -148526070 + L1MC3 LINE L1 6586 6878 -907 680 153 51 0 chr2 102161765 102161883 -148525971 + L1MC3 LINE L1 7180 7303 -482 * 1042 152 18 0 chr2 102161883 102162048 -148525806 + FRAM SINE Alu 1 167 -9 193 29 59 0 chr2 102162048 102162082 -148525772 + (GGGGA)n Simple_repeat Simple_repeat 4 39 0 1103 139 11 11 chr2 102162082 102162269 -148525585 + L1MC3 LINE L1 7290 7476 -309 231 108 54 0 chr2 102162376 102162413 -148525441 - MER58 DNA MER1_type -176 39 1 2079 107 0 35 chr2 102162441 102162751 -148525103 - AluSx SINE Alu -13 299 1 244 317 0 0 chr2 102163041 102163101 -148524753 - LTR33 LTR ERVL -157 364 305 370 302 101 6 chr2 102163129 102163308 -148524546 - LTR33 LTR ERVL -315 206 11 2630 45 0 7 chr2 102163706 102164015 -148523839 + AluY SINE Alu 1 307 -4 693 210 8 0 chr2 102164185 102164309 -148523545 + FLAM_A SINE Alu 1 125 -8 2465 84 0 3 chr2 102164681 102164989 -148522865 - AluSx SINE Alu -1 311 5 975 192 12 0 chr2 102164992 102165159 -148522695 + MER58B DNA MER1_type 171 339 -2 5694 155 60 117 chr2 102165169 102165481 -148522373 + Charlie1a DNA MER1_type 1 329 -2432 2521 95 0 11 chr2 102165481 102165830 -148522024 + L1PA10 LINE L1 5819 6163 -5 5694 155 60 117 chr2 102165830 102165862 -148521992 + Charlie1a DNA MER1_type 329 361 -2400 2380 74 0 3 chr2 102165862 102166190 -148521664 - AluSx SINE Alu 0 327 1 2134 109 0 7 chr2 102166195 102166515 -148521339 - AluSx SINE Alu 0 318 1 5694 155 60 117 chr2 102166515 102167152 -148520702 + Charlie1a DNA MER1_type 365 1036 -1725 2147 110 0 29 chr2 102167152 102167461 -148520393 + AluSx SINE Alu 1 300 -12 5694 155 60 117 chr2 102167461 102167696 -148520158 + Charlie1a DNA MER1_type 1036 1283 -1478 2269 113 0 10 chr2 102167696 102168006 -148519848 - AluSx SINE Alu -5 307 1 5694 155 60 117 chr2 102168006 102168054 -148519800 + Charlie1a DNA MER1_type 1283 1332 -1429 692 104 21 0 chr2 102168054 102168150 -148519704 - FRAM SINE Alu -25 151 54 5694 155 60 117 chr2 102168150 102168301 -148519553 + Charlie1a DNA MER1_type 1332 1437 -18 731 163 35 35 chr2 102168346 102168518 -148519336 - LTR45B LTR ERV1 0 489 318 375 195 161 25 chr2 102168582 102168700 -148519154 - LTR45 LTR ERV1 -391 134 1 317 244 178 15 chr2 102168846 102168981 -148518873 - MIR SINE MIR -85 177 21 1937 141 23 3 chr2 102169554 102169858 -148517996 + AluSx SINE Alu 1 310 -2 2346 116 36 28 chr2 102170005 102170366 -148517488 - THE1B LTR MaLR 0 364 1 2515 123 22 49 chr2 102170375 102170639 -148517215 + MER57B LTR ERV1 1 250 -184 2128 131 3 10 chr2 102170639 102170953 -148516901 - AluSq SINE Alu -1 312 1 2515 123 22 49 chr2 102170953 102171134 -148516720 + MER57B LTR ERV1 250 434 0 184 248 80 26 chr2 102171160 102171273 -148516581 + L2 LINE L2 3142 3260 -12 2417 103 0 0 chr2 102171419 102171731 -148516123 + AluSx SINE Alu 1 312 0 1904 156 0 26 chr2 102172397 102172705 -148515149 - AluJo SINE Alu -12 300 1 1632 184 67 71 chr2 102172751 102173229 -148514625 - L1MD1 LINE L1 0 6242 5767 751 267 81 17 chr2 102173225 102173521 -148514333 - L1ME4a LINE L1 -279 5842 5528 * 1729 118 60 110 chr2 102173786 102173954 -148513900 - MLT1B LTR MaLR -10 380 205 2425 92 0 13 chr2 102173954 102174269 -148513585 - AluY SINE Alu 0 311 1 1729 118 60 110 chr2 102174269 102174303 -148513551 - MLT1B LTR MaLR -185 205 171 2420 110 21 19 chr2 102174303 102174677 -148513177 - THE1C LTR MaLR 0 375 1 1729 118 60 110 chr2 102174677 102174873 -148512981 - MLT1B LTR MaLR -219 171 1 1639 222 98 25 chr2 102175762 102176321 -148511533 + L1ME LINE L1 5208 5803 -367 680 229 107 5 chr2 102176330 102176535 -148511319 - MLT1C LTR MaLR -31 436 211 255 125 0 0 chr2 102176581 102176621 -148511233 + (TTTC)n Simple_repeat Simple_repeat 3 42 0 1985 118 3 100 chr2 102176621 102177001 -148510853 - MLT1B LTR MaLR -46 344 2 903 176 24 6 chr2 102177003 102177168 -148510686 - MLT1B-int LTR MaLR -1 1370 1203 3128 134 81 54 chr2 102177406 102177830 -148510024 - LTR9 LTR ERV1 0 612 201 2068 85 88 4 chr2 102177830 102178102 -148509752 + AluSc SINE Alu 7 301 -8 3128 134 81 54 chr2 102178102 102178202 -148509652 - LTR9 LTR ERV1 -411 201 105 1939 107 4 4 chr2 102178202 102178455 -148509399 + AluSx SINE Alu 1 253 -59 3128 134 81 54 chr2 102178455 102178525 -148509329 - LTR9 LTR ERV1 -507 105 1 1338 234 130 10 chr2 102178867 102179268 -148508586 - LTR2 LTR ERV1 0 449 1 534 202 0 0 chr2 102179348 102179447 -148508407 + AluJb SINE Alu 2 100 -212 1617 132 21 0 chr2 102179447 102179690 -148508164 + MER41B LTR ERV1 4 251 -384 269 160 40 20 chr2 102179696 102179746 -148508108 + HERV17 LTR ERV1 999 1049 -7577 * 1964 94 0 25 chr2 102179733 102180163 -148507691 + HERV17 LTR ERV1 1275 1740 -5156 * 5552 112 7 0 chr2 102180161 102180930 -148506924 + HERV17 LTR ERV1 7626 8399 0 1322 120 167 9 chr2 102180930 102181163 -148506691 + LTR12 LTR ERV1 1 270 -444 359 174 157 52 chr2 102181163 102181278 -148506576 + LTR30 LTR ERV1 375 727 -67 620 161 0 0 chr2 102181278 102181371 -148506483 + LTR12 LTR ERV1 622 714 0 2644 120 16 3 chr2 102181371 102181755 -148506099 + MER41B LTR ERV1 247 635 0 1184 153 11 11 chr2 102181755 102181945 -148505909 + AluJb SINE Alu 94 283 -29 195 155 17 35 chr2 102181967 102182025 -148505829 + GA-rich Low_complexity Low_complexity 1 57 0 1604 162 0 106 chr2 102182049 102182388 -148505466 + AluJb SINE Alu 3 305 -7 1034 135 0 19 chr2 102182397 102182544 -148505310 + AluSx SINE Alu 1 146 -166 7071 66 26 0 chr2 102182544 102183418 -148504436 + MER11D LTR ERVK 1 897 0 6890 63 5 0 chr2 102183426 102184276 -148503578 + HERVK11D LTR ERVK 9 862 -6890 * 39908 37 5 1 chr2 102184260 102188940 -148498914 + HERVK11D LTR ERVK 3052 7752 0 7289 52 28 0 chr2 102188940 102189813 -148498041 + MER11D LTR ERVK 1 897 0 1113 133 6 0 chr2 102189815 102189973 -148497881 + AluSx SINE Alu 143 301 -11 1942 116 47 0 chr2 102190167 102190442 -148497412 + AluSx SINE Alu 14 301 -11 5117 72 3 19 chr2 102190484 102191083 -148496771 - PABL_A LTR ERV1 -1 659 71 2358 98 0 0 chr2 102191083 102191379 -148496475 + AluSc SINE Alu 1 296 -13 5117 72 3 19 chr2 102191379 102191449 -148496405 - PABL_A LTR ERV1 -589 71 1 438 324 35 7 chr2 102191597 102191742 -148496112 - MIR SINE MIR -93 169 21 2367 57 20 7 chr2 102191912 102192209 -148495645 + AluY SINE Alu 1 301 -10 342 94 0 19 chr2 102192241 102192294 -148495560 - AluJo SINE Alu -167 135 84 1654 117 0 0 chr2 102192478 102192701 -148495153 - AluSg/x SINE Alu -6 306 84 2106 109 10 7 chr2 102192702 102192995 -148494859 - AluSq SINE Alu -19 294 1 1237 191 72 93 chr2 102193404 102193864 -148493990 - LTR7 LTR ERV1 0 450 1 828 203 48 93 chr2 102194559 102194849 -148493005 + LTR9 LTR ERV1 80 356 -256 1678 120 16 12 chr2 102194857 102195107 -148492747 - AluSg SINE Alu -20 290 40 25 31 0 0 chr2 102195109 102195141 -148492713 + AT_rich Low_complexity Low_complexity 1 32 0 2078 108 17 3 chr2 102195335 102195622 -148492232 - AluSx SINE Alu -21 291 1 392 261 0 60 chr2 102195695 102195829 -148492025 + L1ME LINE L1 5532 5657 -464 * 774 103 64 64 chr2 102195827 102195983 -148491871 + L1PB2 LINE L1 5883 6038 -113 1987 96 113 8 chr2 102195983 102196346 -148491508 - LTR7 LTR ERV1 0 450 1 836 53 18 0 chr2 102196346 102196459 -148491395 + L1PB2 LINE L1 6034 6148 -3 24 32 0 0 chr2 102196517 102196548 -148491306 + AT_rich Low_complexity Low_complexity 1 31 0 274 220 265 38 chr2 102196661 102196793 -148491061 + MER5B DNA MER1_type 3 164 -14 698 159 94 0 chr2 102197026 102197164 -148490690 - FRAM SINE Alu -25 151 1 227 247 12 25 chr2 102197400 102197481 -148490373 + (CCCCG)n Simple_repeat Simple_repeat 2 81 0 21 71 0 0 chr2 102197812 102197854 -148490000 + GC_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 102198135 102198158 -148489696 + GC_rich Low_complexity Low_complexity 1 23 0 1342 137 4 72 chr2 102199305 102199554 -148488300 + AluJo SINE Alu 1 232 -80 385 250 0 0 chr2 102199818 102199906 -148487948 + MIR SINE MIR 101 188 -74 2560 48 0 0 chr2 102199920 102200213 -148487641 + AluY SINE Alu 1 293 -18 225 283 66 85 chr2 102200285 102200391 -148487463 - MER5B DNA MER1_type -48 130 27 2174 115 7 3 chr2 102200561 102200857 -148486997 + AluSx SINE Alu 1 297 -15 2514 66 0 3 chr2 102201473 102201776 -148486078 + AluY SINE Alu 1 302 -9 380 147 78 98 chr2 102201788 102201817 -148486037 - LTR19A LTR ERV1 0 486 458 2306 104 0 0 chr2 102201817 102202115 -148485739 + AluSq SINE Alu 1 298 -15 380 147 78 98 chr2 102202115 102202187 -148485667 - LTR19A LTR ERV1 -28 458 387 1652 198 148 22 chr2 102202314 102202809 -148485045 + L1M4 LINE L1 4810 5366 -780 1841 135 4 4 chr2 102202809 102203068 -148484786 + AluSq SINE Alu 1 259 -54 2088 106 7 14 chr2 102203653 102203980 -148483874 + AluSx SINE Alu 1 325 0 508 202 0 10 chr2 102204105 102204204 -148483650 + L1 LINE L1 4527 4624 -1522 984 161 58 6 chr2 102204204 102204378 -148483476 + AluSg/x SINE Alu 121 303 -7 1544 184 30 7 chr2 102204403 102204674 -148483180 + AluJb SINE Alu 6 282 -30 1043 192 15 5 chr2 102204705 102204908 -148482946 - L1M4 LINE L1 -1271 4875 4671 1648 185 0 37 chr2 102205297 102205594 -148482260 + AluJb SINE Alu 1 286 -26 37 52 0 0 chr2 102205814 102205872 -148481982 + AT_rich Low_complexity Low_complexity 1 58 0 308 303 171 13 chr2 102206372 102206600 -148481254 - L1MC/D LINE L1 -2291 5517 5254 871 269 127 35 chr2 102206813 102207378 -148480476 - L1ME3 LINE L1 -204 5958 5311 2651 52 0 7 chr2 102207378 102207687 -148480167 - AluY SINE Alu -2 309 3 871 269 127 35 chr2 102207687 102207706 -148480148 - L1ME3 LINE L1 -851 5311 5295 1016 212 30 0 chr2 102207731 102207934 -148479920 + MER6B DNA MER2_type 1 209 -1 2085 114 38 0 chr2 102208481 102208771 -148479083 + AluSx SINE Alu 1 301 -11 587 248 0 8 chr2 102208963 102209088 -148478766 - FLAM_A SINE Alu -9 124 1 32 0 0 0 chr2 102210619 102210651 -148477203 + AT_rich Low_complexity Low_complexity 1 32 0 1812 144 28 3 chr2 102210651 102210935 -148476919 - AluSx SINE Alu -21 291 1 2120 130 3 0 chr2 102212657 102212957 -148474897 - AluSx SINE Alu -6 306 6 302 239 211 0 chr2 102213304 102213413 -148474441 - MER94 DNA DNA -1 133 2 22 35 0 0 chr2 102214676 102214705 -148473149 + AT_rich Low_complexity Low_complexity 1 29 0 1420 234 102 5 chr2 102216336 102216730 -148471124 + MER82 DNA MER2_type 216 647 -6 1264 167 67 21 chr2 102216891 102217131 -148470723 + AluJo SINE Alu 1 251 -61 21 0 0 0 chr2 102217131 102217152 -148470702 + AT_rich Low_complexity Low_complexity 1 21 0 1862 161 16 3 chr2 102218999 102219303 -148468551 - AluJb SINE Alu -4 308 1 2270 92 3 29 chr2 102220309 102220624 -148467230 - AluSp SINE Alu -6 307 1 2514 75 0 0 chr2 102220641 102220947 -148466907 - AluY SINE Alu -5 306 1 2882 13 0 0 chr2 102220959 102221270 -148466584 - AluYa5 SINE Alu 0 311 1 40 37 0 0 chr2 102221590 102221644 -148466210 + AT_rich Low_complexity Low_complexity 1 54 0 2317 90 3 0 chr2 102222928 102223218 -148464636 - AluSq SINE Alu -22 291 1 1306 159 66 57 chr2 102223671 102223972 -148463882 - AluJb SINE Alu -8 304 1 1599 138 80 4 chr2 102224079 102224355 -148463499 - L1MA8 LINE L1 -6 6285 5989 202 282 106 35 chr2 102225083 102225168 -148462686 + L3 LINE CR1 1361 1451 -126 830 126 6 114 chr2 102225541 102225751 -148462103 + AluSg/x SINE Alu 135 326 0 265 254 85 32 chr2 102226147 102226336 -148461518 + L1M4 LINE L1 5193 5391 -755 1084 186 10 15 chr2 102226366 102226603 -148461251 + AluJo SINE Alu 87 322 0 1699 140 3 96 chr2 102227017 102227352 -148460502 - AluJo SINE Alu -8 304 1 265 235 61 126 chr2 102228663 102228893 -148458961 + L2 LINE L2 3019 3233 -39 23 33 0 0 chr2 102229291 102229321 -148458533 + AT_rich Low_complexity Low_complexity 1 30 0 1858 156 7 3 chr2 102229826 102230115 -148457739 + AluSx SINE Alu 1 290 -22 1892 153 0 10 chr2 102230438 102230726 -148457128 - AluSq SINE Alu -28 285 1 527 362 35 0 chr2 102230851 102231050 -148456804 + MIR SINE MIR 7 212 -50 263 353 0 0 chr2 102231220 102231305 -148456549 + MIR3 SINE MIR 117 201 -7 319 251 61 25 chr2 102232057 102232220 -148455634 + L1ME4a LINE L1 5951 6119 -2 232 308 38 4 chr2 102232327 102232502 -148455352 + MIR SINE MIR 23 262 0 2291 107 0 3 chr2 102232568 102232868 -148454986 + AluSq SINE Alu 1 299 -14 412 177 25 25 chr2 102233535 102233614 -148454240 - AluSg/x SINE Alu -22 290 212 494 132 0 0 chr2 102233714 102233782 -148454072 - AluSg/x SINE Alu -108 204 137 2095 104 59 3 chr2 102233851 102234139 -148453715 - AluSg SINE Alu -6 304 1 200 59 29 0 chr2 102234994 102235028 -148452826 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2269 93 0 13 chr2 102235045 102235346 -148452508 + AluSc SINE Alu 1 297 -12 813 157 0 0 chr2 102235346 102235461 -148452393 - AluJo/FLAM SINE Alu -196 116 2 2345 94 0 0 chr2 102235520 102235818 -148452036 + AluSc SINE Alu 1 298 -11 24 91 0 0 chr2 102236125 102236191 -148451663 + AT_rich Low_complexity Low_complexity 1 66 0 257 261 95 28 chr2 102236235 102236406 -148451448 + L1ME LINE L1 5325 5510 -611 25 0 0 0 chr2 102236753 102236778 -148451076 + AT_rich Low_complexity Low_complexity 1 25 0 2341 76 3 0 chr2 102236778 102237069 -148450785 - AluSg SINE Alu -18 292 1 969 136 0 0 chr2 102237071 102237203 -148450651 - AluJo/FLAM SINE Alu -170 132 1 2170 164 42 6 chr2 102237504 102237857 -148449997 - MER47A DNA MER2_type 0 366 1 2560 57 0 0 chr2 102238105 102238406 -148449448 + AluY SINE Alu 1 301 -10 180 77 0 0 chr2 102238593 102238619 -148449235 + (T)n Simple_repeat Simple_repeat 1 26 0 452 249 152 6 chr2 102239344 102239509 -148448345 + MER3 DNA MER1_type 10 198 -11 242 203 102 0 chr2 102239465 102239524 -148448330 - MER3 DNA MER1_type -105 104 40 * 284 93 23 0 chr2 102239842 102239885 -148447969 + MADE1 DNA Mariner 35 78 -2 2098 102 20 3 chr2 102241006 102241300 -148446554 + AluSg SINE Alu 1 299 -11 21 36 0 0 chr2 102241406 102241434 -148446420 + AT_rich Low_complexity Low_complexity 1 28 0 1265 222 132 0 chr2 102241492 102241758 -148446096 + AluJo SINE Alu 2 302 0 303 311 89 22 chr2 102241802 102241937 -148445917 + L1ME LINE L1 4054 4197 -1949 300 301 60 45 chr2 102242090 102242356 -148445498 + L1ME LINE L1 4747 5016 -1130 28 48 0 0 chr2 102242461 102242503 -148445351 + AT_rich Low_complexity Low_complexity 1 42 0 2244 110 0 0 chr2 102242547 102242846 -148445008 + AluSq SINE Alu 1 299 -14 1833 148 3 17 chr2 102242969 102243267 -148444587 - AluJo SINE Alu -7 305 12 304 93 0 0 chr2 102243289 102243332 -148444522 - L1MB7 LINE L1 -2 6182 6140 531 311 44 38 chr2 102243432 102243606 -148444248 - HAL1b LINE L1 -539 809 637 2232 104 0 10 chr2 102243606 102243913 -148443941 + AluSx SINE Alu 1 304 -8 531 311 44 38 chr2 102243913 102244265 -148443589 - HAL1b LINE L1 -711 637 280 777 154 0 0 chr2 102244508 102244618 -148443236 + FLAM_A SINE Alu 1 110 -32 713 146 0 0 chr2 102244618 102244728 -148443126 + MSTA LTR MaLR 1 110 -318 * 1265 209 62 4 chr2 102244727 102245000 -148442854 + LTR1B LTR ERV1 528 816 -10 1147 153 6 11 chr2 102245156 102245333 -148442521 + AluJo SINE Alu 9 184 -128 694 218 0 0 chr2 102245339 102245472 -148442382 + MLT1D LTR MaLR 373 505 0 2241 116 0 0 chr2 102245476 102245770 -148442084 - AluSx SINE Alu -18 294 1 21 0 0 0 chr2 102245912 102245933 -148441921 + AT_rich Low_complexity Low_complexity 1 21 0 1459 195 0 46 chr2 102245943 102246147 -148441707 - AluJb SINE Alu -4 308 96 315 0 0 0 chr2 102246147 102246182 -148441672 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2124 106 0 0 chr2 102246182 102246464 -148441390 - AluSc SINE Alu -27 282 1 1459 195 0 46 chr2 102246464 102246560 -148441294 - AluJb SINE Alu -214 98 21 467 289 47 52 chr2 102247207 102247439 -148440415 + L1ME LINE L1 5456 5686 -435 1894 146 27 14 chr2 102247443 102247738 -148440116 + AluSg SINE Alu 1 299 -11 2023 127 3 23 chr2 102248167 102248466 -148439388 + AluSx SINE Alu 6 298 -14 245 197 16 33 chr2 102248882 102248943 -148438911 - L1MC5 LINE L1 -48 7913 7854 832 146 0 36 chr2 102249843 102249980 -148437874 + FLAM_C SINE Alu 2 133 0 1692 132 86 0 chr2 102250642 102250899 -148436955 - AluJb SINE Alu -16 296 18 1654 193 3 6 chr2 102252008 102252319 -148435535 + AluJo SINE Alu 1 310 -2 1944 120 3 42 chr2 102252428 102252737 -148435117 - AluSx SINE Alu -15 297 1 1706 175 22 0 chr2 102253434 102253732 -148434122 + AluJb SINE Alu 4 307 0 2257 118 0 3 chr2 102254146 102254450 -148433404 - AluSg SINE Alu -7 303 1 582 115 177 26 chr2 102254873 102254986 -148432868 + MER20 DNA MER1_type 40 169 -50 316 261 97 53 chr2 102255036 102255224 -148432630 + MIR SINE MIR 7 214 -48 249 260 146 32 chr2 102255598 102255721 -148432133 + L3 LINE CR1 343 479 -1098 210 286 63 8 chr2 102255799 102255925 -148431929 + L2 LINE L2 1460 1592 -1722 191 239 88 82 chr2 102256169 102256328 -148431526 + L3 LINE CR1 827 986 -591 1752 140 34 3 chr2 102256498 102256790 -148431064 - AluJo SINE Alu -11 301 1 21 0 0 0 chr2 102257793 102257814 -148430040 + GC_rich Low_complexity Low_complexity 1 21 0 842 138 26 97 chr2 102258399 102258594 -148429260 + AluJb SINE Alu 132 312 0 180 0 0 0 chr2 102259049 102259069 -148428785 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1830 90 90 0 chr2 102259069 102259325 -148428529 - AluSx SINE Alu -33 279 1 237 206 73 44 chr2 102259861 102259929 -148427925 + L2 LINE L2 3156 3225 -47 1448 225 56 48 chr2 102260364 102260444 -148427410 - L1MC5 LINE L1 -50 7911 7833 3521 141 13 15 chr2 102260444 102260976 -148426878 - LTR26B LTR ERV1 0 531 1 1448 225 56 48 chr2 102260976 102261052 -148426802 - L1MC5 LINE L1 -128 7833 7759 2956 130 19 54 chr2 102261052 102261536 -148426318 + LTR24 LTR ERV1 1 467 0 1448 225 56 48 chr2 102261536 102261897 -148425957 - L1MC5 LINE L1 -202 7759 7389 929 135 0 0 chr2 102262178 102262304 -148425550 - FAM SINE Alu -40 145 20 474 213 81 52 chr2 102262703 102262839 -148425015 - MER5A DNA MER1_type -3 186 47 28 0 0 0 chr2 102263391 102263419 -148424435 + AT_rich Low_complexity Low_complexity 1 28 0 1493 205 3 43 chr2 102263419 102263546 -148424308 + AluJo SINE Alu 1 132 -180 2258 93 7 0 chr2 102263546 102263836 -148424018 - AluSc SINE Alu -17 292 1 1493 205 3 43 chr2 102263836 102264010 -148423844 + AluJo SINE Alu 132 290 -22 865 75 9 0 chr2 102264111 102264217 -148423637 + AluSx SINE Alu 15 121 -191 1063 158 11 11 chr2 102264324 102264501 -148423353 + AluSx SINE Alu 114 290 -20 322 214 0 0 chr2 102265254 102265324 -148422530 - MER33 DNA MER1_type -4 320 251 38052 58 4 3 chr2 102265340 102270878 -148416976 + L1PA6 LINE L1 578 6154 0 962 173 108 24 chr2 102270879 102271005 -148416849 - MER33 DNA MER1_type -2315 270 156 2064 145 3 0 chr2 102271005 102271309 -148416545 - AluSx SINE Alu -7 305 1 962 173 108 24 chr2 102271309 102271431 -148416423 - MER33 DNA MER1_type -2429 156 1 2811 207 31 70 chr2 102272360 102272483 -148415371 - L1M4c LINE L1 -2734 3648 3522 2354 93 7 0 chr2 102272483 102272785 -148415069 - AluSq SINE Alu -9 304 1 2811 207 31 70 chr2 102272785 102273286 -148414568 - L1M4c LINE L1 -2860 3522 3068 1934 141 33 0 chr2 102273286 102273463 -148414391 - AluSx SINE Alu -3 309 116 189 0 0 0 chr2 102273463 102273484 -148414370 + (TG)n Simple_repeat Simple_repeat 2 22 0 1934 141 33 0 chr2 102273484 102273605 -148414249 - AluSx SINE Alu -196 116 1 2811 207 31 70 chr2 102273605 102273900 -148413954 - L1M4c LINE L1 -3314 3068 2763 2082 117 21 0 chr2 102273902 102274184 -148413670 - AluSx SINE Alu -22 290 3 307 163 0 88 chr2 102274218 102274298 -148413556 + L1M4 LINE L1 2461 2533 -3613 * 2247 244 21 53 chr2 102274287 102275311 -148412543 - L1M4c LINE L1 -4130 2433 1289 4611 133 47 10 chr2 102275313 102276020 -148411834 + L1MC1 LINE L1 5599 6331 -2 264 355 0 0 chr2 102276036 102276112 -148411742 + MER5C DNA MER1_type 1 76 -248 2396 97 3 0 chr2 102276749 102277059 -148410795 + AluSq SINE Alu 1 311 -2 296 349 116 18 chr2 102277758 102278248 -148409606 - L2 LINE L2 -1503 1811 1274 187 304 89 25 chr2 102278436 102278515 -148409339 + L2 LINE L2 3189 3272 0 782 299 66 16 chr2 102279348 102279666 -148408188 + LTR16B LTR ERVL 124 457 -7 744 187 117 6 chr2 102280689 102280860 -148406994 - MIR SINE MIR -6 256 67 242 333 146 0 chr2 102280880 102280976 -148406878 + L2 LINE L2 3187 3296 -17 21 36 0 0 chr2 102281112 102281140 -148406714 + AT_rich Low_complexity Low_complexity 1 28 0 315 217 57 85 chr2 102281426 102281532 -148406322 + HERVL LTR ERVL 3590 3692 -1962 2507 50 0 7 chr2 102281538 102281836 -148406018 - AluY SINE Alu -15 296 1 348 253 45 121 chr2 102282155 102282353 -148405501 + LTR50 LTR ERVL 1 183 -612 2028 147 0 3 chr2 102282426 102282719 -148405135 - AluSq SINE Alu -21 292 1 534 138 0 0 chr2 102283213 102283293 -148404561 + L1MB5 LINE L1 6078 6157 -17 1082 164 80 0 chr2 102333347 102333415 -148354439 - MER30 DNA MER1_type 0 230 169 1993 139 0 3 chr2 102333415 102333725 -148354129 - AluSx SINE Alu -3 309 1 1082 164 80 0 chr2 102333725 102333869 -148353985 - MER30 DNA MER1_type -61 169 1 2093 98 0 3 chr2 102334059 102334344 -148353510 + AluSq SINE Alu 1 284 -29 364 148 23 114 chr2 102334446 102334534 -148353320 - MER94 DNA DNA -53 81 2 1078 191 31 42 chr2 102335085 102335358 -148352496 + MLT1A1 LTR MaLR 1 264 -132 2073 138 93 33 chr2 102335362 102335782 -148352072 + L1MA4 LINE L1 5854 6298 -2 287 189 0 162 chr2 102335782 102335856 -148351998 + MLT1A1 LTR MaLR 228 291 -83 1771 195 18 3 chr2 102335956 102336284 -148351570 - MER68 LTR ERV1 -229 333 1 509 140 0 43 chr2 102336284 102336377 -148351477 + L1MB8 LINE L1 6077 6165 -13 654 279 43 13 chr2 102336385 102336618 -148351236 + L1M4 LINE L1 4598 4837 -1309 918 157 13 0 chr2 102336626 102336779 -148351075 + AluSp SINE Alu 142 296 -17 818 213 58 86 chr2 102336788 102337136 -148350718 + L1M4 LINE L1 4842 5179 -967 32 0 0 0 chr2 102338211 102338243 -148349611 + GC_rich Low_complexity Low_complexity 1 32 0 234 0 0 0 chr2 102338827 102338853 -148349001 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 541 286 45 58 chr2 102339346 102339570 -148348284 + MIR SINE MIR 16 236 -26 186 43 0 0 chr2 102340232 102340255 -148347599 + (TCC)n Simple_repeat Simple_repeat 2 24 0 1154 178 64 85 chr2 102341004 102341072 -148346782 - LTR37A LTR ERV1 0 426 358 2046 120 0 3 chr2 102341072 102341373 -148346481 + AluY SINE Alu 1 300 -11 1154 178 64 85 chr2 102341373 102341692 -148346162 - LTR37A LTR ERV1 -68 358 47 1747 150 17 3 chr2 102342000 102342294 -148345560 - AluJb SINE Alu -14 298 1 325 267 162 0 chr2 102342558 102342663 -148345191 + L2 LINE L2 3190 3311 -2 2086 130 0 0 chr2 102342715 102343014 -148344840 - AluSq SINE Alu -14 299 1 29 0 0 0 chr2 102343504 102343533 -148344321 + AT_rich Low_complexity Low_complexity 1 29 0 1709 157 0 24 chr2 102343536 102343829 -148344025 - AluJb SINE Alu -26 286 1 2369 78 0 3 chr2 102344707 102345013 -148342841 + AluSq SINE Alu 1 305 -8 1491 185 4 0 chr2 102345113 102345378 -148342476 + AluJo SINE Alu 1 266 -46 201 200 14 43 chr2 102345859 102345929 -148341925 + A-rich Low_complexity Low_complexity 4 71 0 1967 126 0 43 chr2 102345981 102346126 -148341728 + AluSx SINE Alu 1 151 -161 2117 96 3 26 chr2 102346126 102346428 -148341426 + AluSc SINE Alu 1 295 -14 1967 126 0 43 chr2 102346428 102346608 -148341246 + AluSx SINE Alu 151 312 0 1190 138 236 12 chr2 102346657 102346903 -148340951 + AluSg1 SINE Alu 1 301 -8 326 269 17 69 chr2 102346910 102347085 -148340769 - L1ME4a LINE L1 -133 5988 5823 7289 50 0 14 chr2 102347200 102348304 -148339550 - L1PA6 LINE L1 -3 6151 5060 2141 107 13 7 chr2 102348304 102348614 -148339240 - AluSq SINE Alu -1 312 1 7289 50 0 14 chr2 102348614 102348919 -148338935 - L1PA6 LINE L1 -1094 5060 4752 1301 171 28 20 chr2 102349655 102349907 -148337947 + AluJo SINE Alu 1 254 -58 996 136 0 0 chr2 102349953 102350129 -148337725 + (TA)n Simple_repeat Simple_repeat 1 176 0 744 177 120 23 chr2 102350342 102350517 -148337337 + MLT1C LTR MaLR 6 197 -270 872 118 0 15 chr2 102350518 102350653 -148337201 + FLAM_C SINE Alu 1 133 -10 1051 243 34 15 chr2 102350672 102350939 -148336915 + MLT1C LTR MaLR 189 460 -7 736 151 17 0 chr2 102352779 102352898 -148334956 - AluSp/q SINE Alu -9 304 184 197 308 103 19 chr2 102353058 102353278 -148334576 - L3 LINE CR1 -220 1357 1057 228 241 35 0 chr2 102354239 102354297 -148333557 + L2 LINE L2 3212 3271 -1 3484 147 91 10 chr2 102354661 102355393 -148332461 + L1MB5 LINE L1 5189 5987 -187 1210 137 5 10 chr2 102355811 102356015 -148331839 - AluJb SINE Alu -9 303 101 1652 131 11 4 chr2 102356078 102356345 -148331509 + AluSx SINE Alu 35 303 -9 2013 126 3 7 chr2 102358219 102358529 -148329325 - AluSq SINE Alu -4 309 1 487 260 35 35 chr2 102359047 102359117 -148328737 - MER5B DNA MER1_type -5 173 104 188 65 0 32 chr2 102359117 102359148 -148328706 + (CACCC)n Simple_repeat Simple_repeat 3 32 0 487 260 35 35 chr2 102359148 102359250 -148328604 - MER5B DNA MER1_type -73 105 1 4331 129 79 48 chr2 102359640 102359905 -148327949 + L1MB3 LINE L1 5284 5539 -644 2210 73 0 3 chr2 102359905 102360194 -148327660 + AluSx SINE Alu 1 288 -24 4331 129 79 48 chr2 102360194 102360801 -148327053 + L1MB3 LINE L1 5539 6183 0 188 222 22 22 chr2 102361796 102361841 -148326013 - MIR SINE MIR -1 261 217 * 255 279 16 0 chr2 102361807 102361868 -148325986 - L2 LINE L2 -17 3255 3194 1908 145 3 0 chr2 102364524 102364827 -148323027 - AluSx SINE Alu -4 308 5 252 293 35 26 chr2 102364975 102365091 -148322763 - L2 LINE L2 -2 3270 3154 2814 3 0 0 chr2 102365767 102366078 -148321776 - AluY SINE Alu 0 311 1 199 182 0 0 chr2 102366324 102366357 -148321497 + L2 LINE L2 3267 3299 -14 648 216 95 58 chr2 102366421 102366662 -148321192 + L1MC5 LINE L1 7659 7908 -53 1000 130 0 88 chr2 102366908 102367100 -148320754 + AluJb SINE Alu 134 308 -4 1937 130 3 10 chr2 102367124 102367431 -148320423 + AluSx SINE Alu 1 305 -7 438 225 23 16 chr2 102367450 102367579 -148320275 - MER103 DNA DNA -34 132 3 192 311 0 0 chr2 102367621 102367682 -148320172 - MER5C DNA MER1_type -263 61 1 1555 169 23 78 chr2 102367786 102368171 -148319683 + MLT1A1 LTR MaLR 2 365 0 1779 89 0 85 chr2 102368489 102368782 -148319072 + AluSq SINE Alu 1 268 -45 362 272 54 0 chr2 102369461 102369553 -148318301 - MIR SINE MIR -87 175 79 1849 161 3 3 chr2 102369738 102370037 -148317817 + AluSx SINE Alu 1 299 -13 283 320 130 58 chr2 102370044 102370475 -148317379 + L2 LINE L2 2810 3271 -1 1076 129 0 43 chr2 102371290 102371476 -148316378 - AluJb SINE Alu -16 296 119 339 260 70 81 chr2 102371518 102371727 -148316127 - L1MEd LINE L1 -4822 1488 1278 2166 96 0 0 chr2 102371727 102372019 -148315835 - AluSg SINE Alu -18 292 1 339 260 70 81 chr2 102372019 102372082 -148315772 - L1MEd LINE L1 -5032 1278 1216 2051 113 0 0 chr2 102372082 102372387 -148315467 - AluSx SINE Alu 0 312 16 339 260 70 81 chr2 102372387 102372684 -148315170 - L1MEd LINE L1 -5094 1216 895 180 0 0 0 chr2 102372736 102372756 -148315098 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1655 196 20 15 chr2 102372782 102373124 -148314730 - L1MC2 LINE L1 -37 6307 5964 247 254 0 0 chr2 102373245 102373312 -148314542 - L1MEd LINE L1 -5290 829 763 3481 154 78 45 chr2 102373405 102374131 -148313723 - L1MB2 LINE L1 -1 6170 5421 380 383 22 11 chr2 102374132 102374315 -148313539 - L1MEd LINE L1 -5426 693 509 1521 156 23 50 chr2 102375115 102375416 -148312438 - AluJo SINE Alu -18 294 2 2252 96 0 0 chr2 102376186 102376487 -148311367 + AluSx SINE Alu 2 302 -10 2481 37 7 0 chr2 102376979 102377279 -148310575 + AluY SINE Alu 1 302 -9 1961 104 0 14 chr2 102377990 102378301 -148309553 - AluY SINE Alu 0 307 1 2011 88 25 0 chr2 102378301 102378575 -148309279 - AluSx SINE Alu -31 281 1 427 264 3 7 chr2 102378902 102379194 -148308660 + (CA)n Simple_repeat Simple_repeat 1 291 0 266 297 115 27 chr2 102382320 102382468 -148305386 - MIR SINE MIR -79 183 23 1770 155 7 29 chr2 102383004 102383313 -148304541 - AluSx SINE Alu -10 302 1 1700 188 57 23 chr2 102383889 102384241 -148303613 + MLT1A1 LTR MaLR 1 364 -1 399 300 59 90 chr2 102384361 102384751 -148303103 - L2 LINE L2 0 3272 2895 1848 160 3 7 chr2 102385932 102386239 -148301615 - AluJo SINE Alu -1 311 6 2232 84 0 7 chr2 102386630 102386928 -148300926 - AluSg1 SINE Alu -13 296 1 228 67 0 0 chr2 102387225 102387255 -148300599 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 446 236 0 0 chr2 102389822 102389928 -148297926 - L1MA9 LINE L1 -22 6290 6185 1056 178 23 10 chr2 102389928 102390154 -148297700 - L1MA9 LINE L1 -208 6092 5861 1974 99 4 0 chr2 102390645 102390917 -148296937 + AluSg SINE Alu 32 304 -6 268 328 17 14 chr2 102391639 102391819 -148296035 - L2 LINE L2 -478 2836 2610 707 135 41 0 chr2 102391857 102392027 -148295827 + (TCTA)n Simple_repeat Simple_repeat 4 180 0 1893 110 17 14 chr2 102392549 102392841 -148295013 + AluSx SINE Alu 1 293 -19 1925 95 0 35 chr2 102394061 102394346 -148293508 + AluSq SINE Alu 39 313 0 225 345 45 0 chr2 102394621 102394731 -148293123 - MIR3 SINE MIR -7 201 87 543 270 124 11 chr2 102395120 102395298 -148292556 - MIR SINE MIR -34 228 31 2599 204 44 107 chr2 102396201 102396240 -148291614 + L1MD2 LINE L1 5402 5442 -917 2331 89 0 3 chr2 102396240 102396553 -148291301 + AluSq SINE Alu 1 312 -1 2599 204 44 107 chr2 102396553 102397070 -148290784 + L1MD2 LINE L1 5442 5874 -485 1294 103 60 4 chr2 102397070 102397302 -148290552 + L1MA3 LINE L1 6060 6304 -1 2599 204 44 107 chr2 102397302 102397708 -148290146 + L1MD2 LINE L1 5874 6304 -55 183 80 0 0 chr2 102397722 102397747 -148290107 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 1403 177 39 35 chr2 102397749 102398060 -148289794 - AluJo SINE Alu 0 312 1 841 123 31 8 chr2 102398064 102398194 -148289660 - AluJo SINE Alu -178 134 2 317 125 31 0 chr2 102398194 102398258 -148289596 + L1MD2 LINE L1 6291 6356 -3 201 175 0 0 chr2 102399772 102399812 -148288042 + (TG)n Simple_repeat Simple_repeat 1 40 0 226 267 158 25 chr2 102401224 102401344 -148286510 + MIR SINE MIR 125 260 -2 363 335 23 26 chr2 102402095 102402251 -148285603 - MIR3 SINE MIR -20 188 23 430 315 93 19 chr2 102404024 102404186 -148283668 + L2 LINE L2 3097 3270 -2 443 82 14 0 chr2 102404188 102404261 -148283593 + (TGGA)n Simple_repeat Simple_repeat 3 76 0 1746 185 26 50 chr2 102404664 102405048 -148282806 - MLT1B LTR MaLR -15 375 1 1997 105 20 16 chr2 102405957 102406263 -148281591 - AluSc SINE Alu -2 307 1 293 361 78 15 chr2 102406416 102406621 -148281233 - L3 LINE CR1 -1043 534 317 344 295 0 9 chr2 102407195 102407307 -148280547 - L1ME4a LINE L1 -3 6118 6008 422 240 47 31 chr2 102408511 102408640 -148279214 + LTR33 LTR ERVL 389 519 -2 213 196 0 0 chr2 102408641 102408687 -148279167 + (CAGA)n Simple_repeat Simple_repeat 2 47 0 493 225 47 99 chr2 102408736 102408927 -148278927 + MIR SINE MIR 72 252 -10 378 222 167 63 chr2 102408930 102409056 -148278798 - L1ME4a LINE L1 -226 5895 5784 1487 177 7 24 chr2 102409056 102409350 -148278504 - AluJb SINE Alu -23 289 1 378 222 167 63 chr2 102409350 102409462 -148278392 - L1ME4a LINE L1 -337 5784 5632 2159 79 26 10 chr2 102410201 102410504 -148277350 - AluY SINE Alu 0 311 4 31689 97 9 13 chr2 102411117 102415644 -148272210 + L1P LINE L1 11 4519 -1627 2328 132 37 60 chr2 102415744 102415945 -148271909 + MSTB1 LTR MaLR 10 214 -218 1393 168 88 18 chr2 102415945 102416230 -148271624 + AluJo SINE Alu 3 307 -5 2328 132 37 60 chr2 102416230 102416461 -148271393 + MSTB1 LTR MaLR 214 432 0 30 45 0 0 chr2 102416490 102416534 -148271320 + AT_rich Low_complexity Low_complexity 1 44 0 1991 107 7 14 chr2 102416534 102416825 -148271029 - AluSx SINE Alu -23 289 1 274 274 148 37 chr2 102417465 102417600 -148270254 - MIR3 SINE MIR -25 183 34 38 22 0 0 chr2 102418503 102418548 -148269306 + GC_rich Low_complexity Low_complexity 1 45 0 32 0 0 0 chr2 102418763 102418795 -148269059 + GC_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 102418816 102418837 -148269017 + GC_rich Low_complexity Low_complexity 1 21 0 632 232 55 59 chr2 102419085 102419305 -148268549 + MIR SINE MIR 24 242 -20 1423 145 55 12 chr2 102419307 102419562 -148268292 + MER2 DNA MER2_type 1 266 -79 1022 149 0 6 chr2 102419562 102419730 -148268124 - AluJb SINE Alu -9 303 137 384 59 0 0 chr2 102420357 102420408 -148267446 + (TA)n Simple_repeat Simple_repeat 1 51 0 791 193 28 105 chr2 102420435 102420720 -148267134 - L1ME4a LINE L1 -580 5582 5320 2131 139 47 0 chr2 102420727 102421087 -148266767 - L1MB1 LINE L1 -7 6161 5785 1750 128 9 98 chr2 102421108 102421436 -148266418 - MER4A LTR ERV1 -6 658 360 1726 162 56 26 chr2 102421436 102421451 -148266403 - L1MB1 LINE L1 -377 5791 5778 1690 163 7 20 chr2 102421451 102421757 -148266097 - AluJo SINE Alu -10 302 1 1726 162 56 26 chr2 102421757 102422080 -148265774 - L1MB1 LINE L1 -390 5778 5443 405 0 0 0 chr2 102422090 102422135 -148265719 + (TTA)n Simple_repeat Simple_repeat 2 46 0 1316 194 54 25 chr2 102422148 102422427 -148265427 - AluJo SINE Alu -25 287 1 719 199 6 0 chr2 102422436 102422592 -148265262 - L1MB1 LINE L1 -1542 4604 4448 269 151 8 48 chr2 102422660 102422786 -148265068 + (TA)n Simple_repeat Simple_repeat 2 122 0 294 258 102 23 chr2 102422803 102422931 -148264923 + L2 LINE L2 1211 1348 -1966 * 458 265 143 58 chr2 102422919 102423001 -148264853 + L2 LINE L2 2996 3070 -243 2032 123 7 3 chr2 102423001 102423294 -148264560 + AluSx SINE Alu 1 294 -18 458 265 143 58 chr2 102423294 102423434 -148264420 + L2 LINE L2 3070 3237 -76 3984 154 36 26 chr2 102423435 102424011 -148263843 + MER39 LTR ERV1 7 593 -114 2331 130 119 8 chr2 102424011 102424396 -148263458 + MSTA LTR MaLR 1 428 0 3984 154 36 26 chr2 102424396 102424513 -148263341 + MER39 LTR ERV1 593 707 0 683 230 150 61 chr2 102425241 102425554 -148262300 + MLT1H LTR MaLR 209 549 0 1091 88 11 17 chr2 102425973 102426154 -148261700 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1707 147 4 7 chr2 102426156 102426435 -148261419 - AluJb SINE Alu -32 280 3 1728 150 21 3 chr2 102426550 102426836 -148261018 - AluJo SINE Alu -21 291 1 2367 192 135 12 chr2 102426998 102427560 -148260294 - MER73 LTR ERVL -13 631 1 2203 100 3 0 chr2 102429202 102429503 -148258351 - AluSq SINE Alu -11 302 1 486 298 183 10 chr2 102430969 102431177 -148256677 - MIR SINE MIR 0 262 19 476 274 14 88 chr2 102431252 102431429 -148256425 + MIR SINE MIR 12 174 -62 1743 141 80 39 chr2 102431559 102431921 -148255933 + MER31A LTR ERV1 1 377 -108 2250 105 0 3 chr2 102432026 102432339 -148255515 + AluSx SINE Alu 1 312 0 4125 238 80 47 chr2 102432339 102433446 -148254408 + MLT1A1-int LTR MaLR 244 1387 -348 1056 83 0 0 chr2 102433446 102433579 -148254275 + AluSq/x SINE Alu 1 133 -180 2959 164 14 2 chr2 102433586 102434074 -148253780 + Tigger3(Golem) DNA MER2_type 2536 3029 0 292 188 0 0 chr2 102434074 102434122 -148253732 + MLT1A1-int LTR MaLR 1688 1735 0 1069 197 65 111 chr2 102434122 102434492 -148253362 + MLT1A1 LTR MaLR 1 353 -12 234 0 0 0 chr2 102434576 102434602 -148253252 + (A)n Simple_repeat Simple_repeat 1 26 0 198 228 12 148 chr2 102434637 102434703 -148253151 + L2 LINE L2 3171 3204 -109 2157 108 3 3 chr2 102434703 102435010 -148252844 - AluJb SINE Alu 0 312 6 198 228 12 148 chr2 102435010 102435105 -148252749 + L2 LINE L2 3204 3310 -3 250 277 159 31 chr2 102435549 102435744 -148252110 + MIR SINE MIR 24 243 -19 2019 130 0 0 chr2 102436260 102436559 -148251295 - AluSc SINE Alu -7 302 4 2308 92 0 0 chr2 102436564 102436870 -148250984 - AluSc SINE Alu -2 307 2 2131 94 0 10 chr2 102437548 102437846 -148250008 - AluSx SINE Alu -17 295 1 268 160 0 0 chr2 102437862 102437912 -148249942 - LTR37B LTR ERV1 0 468 419 2246 130 34 17 chr2 102438009 102438176 -148249678 - MLT1B LTR MaLR -1 389 226 1627 159 43 20 chr2 102438176 102438477 -148249377 - AluJo SINE Alu -4 308 1 2246 130 34 17 chr2 102438477 102438664 -148249190 - MLT1B LTR MaLR -164 226 29 292 230 0 27 chr2 102438690 102438764 -148249090 - LTR37B LTR ERV1 -199 269 198 2036 121 0 7 chr2 102438836 102439141 -148248713 + AluSx SINE Alu 1 303 -9 23 33 0 0 chr2 102439403 102439433 -148248421 + AT_rich Low_complexity Low_complexity 1 30 0 675 309 53 75 chr2 102439461 102439544 -148248310 - L1MC/D LINE L1 -2082 5726 5643 2106 122 3 0 chr2 102439544 102439848 -148248006 - AluSx SINE Alu -7 305 1 675 309 53 75 chr2 102439848 102440201 -148247653 - L1MC/D LINE L1 -2165 5643 5300 683 168 23 30 chr2 102440212 102440343 -148247511 - FLAM_C SINE Alu -3 130 1 222 118 0 0 chr2 102440448 102440482 -148247372 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 242 313 16 0 chr2 102443136 102443200 -148244654 - L2 LINE L2 -14 3299 3235 1506 200 65 21 chr2 102443275 102443615 -148244239 + L1MB5 LINE L1 5770 6124 -50 2177 110 0 0 chr2 102443616 102443915 -148243939 - AluSx SINE Alu -12 300 2 22 0 0 0 chr2 102443977 102443999 -148243855 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 102444119 102444142 -148243712 + AT_rich Low_complexity Low_complexity 1 23 0 367 206 55 0 chr2 102444380 102444453 -148243401 + MER5A DNA MER1_type 4 80 -109 2258 95 0 16 chr2 102444472 102444788 -148243066 + AluSp SINE Alu 1 311 -2 413 164 0 226 chr2 102444807 102444888 -148242966 + MER5A DNA MER1_type 61 90 -99 1982 113 0 35 chr2 102444888 102445198 -148242656 + AluSq SINE Alu 3 301 -12 413 164 0 226 chr2 102445198 102445275 -148242579 + MER5A DNA MER1_type 90 183 -6 393 39 0 0 chr2 102445573 102445624 -148242230 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1398 7 0 0 chr2 102445627 102445782 -148242072 - L1HS LINE L1 0 6155 6001 2531 11 0 0 chr2 102445782 102446065 -148241789 + L1HS LINE L1 5697 5979 -176 1481 146 67 4 chr2 102446306 102446608 -148241246 - AluJo SINE Alu 0 319 1 349 216 81 0 chr2 102447775 102447849 -148240005 - L2 LINE L2 -6 3266 3187 2426 63 0 0 chr2 102448120 102448421 -148239433 - AluY SINE Alu -10 301 1 1048 125 0 0 chr2 102448421 102448565 -148239289 - AluSq/x SINE Alu -169 144 1 1337 150 126 12 chr2 102448707 102448961 -148238893 - AluJo SINE Alu -19 293 11 180 0 0 0 chr2 102449123 102449143 -148238711 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1620 227 60 26 chr2 102449339 102449737 -148238117 + Charlie1b DNA MER1_type 1 417 -2344 2051 123 66 23 chr2 102449737 102450086 -148237768 - THE1B LTR MaLR 0 364 1 1620 227 60 26 chr2 102450086 102450141 -148237713 + Charlie1b DNA MER1_type 417 469 -54 180 0 0 0 chr2 102450141 102450161 -148237693 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 246 140 260 0 chr2 102450984 102451034 -148236820 + Charlie1b DNA MER1_type 461 523 0 2087 139 35 14 chr2 102451682 102452049 -148235805 - THE1C LTR MaLR 0 375 1 265 236 0 0 chr2 102452088 102452143 -148235711 + Charlie1 DNA MER1_type 167 2459 -302 191 211 0 0 chr2 102452155 102452193 -148235661 + MIR3 SINE MIR 161 198 -10 1169 98 11 35 chr2 102452201 102452375 -148235479 + L1PA16 LINE L1 5759 5907 -259 1254 112 5 31 chr2 102452375 102452568 -148235286 + L1PA16 LINE L1 5974 6164 -2 1169 98 11 35 chr2 102452568 102452590 -148235264 + L1PA16 LINE L1 5907 5928 -238 301 122 0 20 chr2 102452648 102452697 -148235157 + MLT1B LTR MaLR 1 48 -326 * 626 231 77 43 chr2 102452694 102452928 -148234926 + MLT1B LTR MaLR 149 390 0 256 290 65 32 chr2 102453139 102453232 -148234622 + MIR SINE MIR 23 118 -90 2697 228 55 81 chr2 102453235 102453507 -148234347 + MER97c DNA MER1_type? 1 278 -812 2171 209 50 47 chr2 102453507 102454129 -148233725 - MLT1E3 LTR MaLR 0 624 1 2697 228 55 81 chr2 102454129 102454669 -148233185 + MER97c DNA MER1_type? 278 830 -260 1945 110 7 3 chr2 102454669 102454987 -148232867 - AluSq SINE Alu 0 319 1 2697 228 55 81 chr2 102454987 102455198 -148232656 + MER97c DNA MER1_type? 830 998 -92 1797 150 90 38 chr2 102455198 102455544 -148232310 + THE1B LTR MaLR 1 364 0 2697 228 55 81 chr2 102455544 102455635 -148232219 + MER97c DNA MER1_type? 998 1090 0 216 263 169 65 chr2 102455673 102455827 -148232027 - MIR SINE MIR -10 252 50 284 280 60 10 chr2 102456109 102456209 -148231645 + L2 LINE L2 3159 3263 -9 1536 172 0 22 chr2 102456482 102456755 -148231099 - AluJo SINE Alu -43 269 3 2685 173 17 15 chr2 102456756 102457223 -148230631 + LTR26B LTR ERV1 64 531 0 383 189 27 0 chr2 102457223 102457294 -148230560 + MLT1I LTR MaLR 331 403 -6 198 0 0 0 chr2 102458275 102458297 -148229557 + (A)n Simple_repeat Simple_repeat 1 22 0 258 156 0 0 chr2 102458337 102458382 -148229472 + T-rich Low_complexity Low_complexity 1 45 0 213 0 81 0 chr2 102459265 102459302 -148228552 + C-rich Low_complexity Low_complexity 2 41 0 1875 131 34 7 chr2 102459830 102460127 -148227727 + AluJb SINE Alu 1 305 -7 826 126 0 22 chr2 102460413 102460548 -148227306 + AluJb SINE Alu 2 133 -179 1917 162 64 22 chr2 102462519 102462878 -148224976 - MLT1A2 LTR MaLR 0 374 1 2177 103 3 3 chr2 102462931 102463231 -148224623 + AluSq SINE Alu 1 300 -13 8686 106 19 25 chr2 102463456 102464764 -148223090 - HSMAR2 DNA Mariner 0 1302 2 486 294 107 0 chr2 102465108 102465285 -148222569 - L2 LINE L2 -2 3311 3116 235 114 0 0 chr2 102465307 102465342 -148222512 - MSTD LTR MaLR 0 396 362 1410 218 127 38 chr2 102465349 102465767 -148222087 - MSTB2 LTR MaLR 0 457 3 867 290 232 46 chr2 102465905 102466102 -148221752 - L2 LINE L2 -410 2904 2745 3633 91 26 8 chr2 102466102 102466606 -148221248 - LTR10D LTR ERV1 0 513 1 867 290 232 46 chr2 102466606 102467555 -148220299 - L2 LINE L2 -569 2745 1545 1132 254 187 13 chr2 102467594 102468222 -148219632 - HAL1 LINE L1 -1723 784 1 180 77 0 0 chr2 102468714 102468740 -148219114 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 230 308 66 0 chr2 102469180 102469271 -148218583 - L3 LINE CR1 -84 1493 1397 2581 142 30 33 chr2 102469289 102469469 -148218385 - Tigger2a DNA MER2_type -2274 434 255 225 65 0 0 chr2 102469469 102469500 -148218354 + (CA)n Simple_repeat Simple_repeat 2 32 0 2581 142 30 33 chr2 102469500 102469749 -148218105 - Tigger2a DNA MER2_type -2453 255 6 301 196 0 0 chr2 102469873 102469929 -148217925 - MER2 DNA MER2_type -283 62 7 653 216 0 12 chr2 102469934 102470105 -148217749 + (CATATA)n Simple_repeat Simple_repeat 6 174 0 255 194 29 39 chr2 102470119 102470222 -148217632 + (CATATA)n Simple_repeat Simple_repeat 3 104 0 309 283 0 22 chr2 102470227 102470319 -148217535 - L1MC4 LINE L1 -1339 6703 6614 239 297 23 0 chr2 102470461 102470636 -148217218 + (TA)n Simple_repeat Simple_repeat 2 180 0 1629 146 81 34 chr2 102470690 102471013 -148216841 + MER2 DNA MER2_type 1 338 -7 2207 111 10 3 chr2 102471016 102471322 -148216532 + AluSx SINE Alu 1 308 -4 302 326 95 0 chr2 102471369 102471516 -148216338 - MIR SINE MIR -82 180 20 427 155 10 29 chr2 102471754 102471857 -148215997 - MER5A DNA MER1_type -80 109 9 283 170 0 0 chr2 102471938 102471991 -148215863 + MIR SINE MIR 102 154 -108 1937 119 18 4 chr2 102472272 102472575 -148215279 - AluSx SINE Alu 0 307 1 188 226 137 105 chr2 102473735 102473925 -148213929 + MIR SINE MIR 63 258 -4 363 100 33 0 chr2 102474224 102474284 -148213570 - MER53 DNA DNA -101 88 27 273 98 0 0 chr2 102474296 102474337 -148213517 + (TG)n Simple_repeat Simple_repeat 1 41 0 26 64 0 0 chr2 102474669 102474716 -148213138 + AT_rich Low_complexity Low_complexity 1 47 0 1836 143 0 26 chr2 102474950 102475288 -148212566 - AluJb SINE Alu 0 312 1 1500 273 83 25 chr2 102475384 102475602 -148212252 - L1ME2 LINE L1 -258 5906 5702 198 0 0 0 chr2 102475602 102475624 -148212230 + (TA)n Simple_repeat Simple_repeat 1 22 0 1500 273 83 25 chr2 102475624 102476169 -148211685 - L1ME2 LINE L1 -462 5702 5190 880 76 0 15 chr2 102476169 102476301 -148211553 + (TTCC)n Simple_repeat Simple_repeat 3 132 0 1653 184 0 14 chr2 102476303 102476585 -148211269 - AluJo SINE Alu -34 278 1 1500 273 83 25 chr2 102476585 102476925 -148210929 - L1ME2 LINE L1 -974 5190 4733 473 266 98 7 chr2 102477096 102477514 -148210340 - L1ME LINE L1 -362 5802 5257 602 213 104 59 chr2 102477566 102477768 -148210086 + MER58C DNA MER1_type 1 211 -4 286 119 0 0 chr2 102478680 102478722 -148209132 - MER57A LTR ERV1 -67 336 295 1360 221 67 31 chr2 102478725 102479082 -148208772 - L1MB7 LINE L1 -10 6174 5805 2260 160 16 47 chr2 102479085 102479121 -148208733 - MER65C LTR ERV1 0 461 425 2466 74 0 0 chr2 102479121 102479417 -148208437 - AluY SINE Alu -2 309 14 2260 160 16 47 chr2 102479417 102479825 -148208029 - MER65C LTR ERV1 -36 425 31 4305 217 21 41 chr2 102479832 102481572 -148206282 - L1MB7 LINE L1 -378 5806 4098 1202 101 0 0 chr2 102481572 102481721 -148206133 + AluSp SINE Alu 136 284 -29 1106 207 97 61 chr2 102481872 102482296 -148205558 - MER41B LTR ERV1 -34 601 114 348 175 225 0 chr2 102482297 102482377 -148205477 - MER46A DNA MER2_type -138 98 1 519 211 0 10 chr2 102482971 102483075 -148204779 - L1MB5 LINE L1 -144 6030 5928 * 2420 212 39 19 chr2 102483051 102483688 -148204166 - L1MB7 LINE L1 -2382 3764 3115 2560 50 0 0 chr2 102483724 102484023 -148203831 + AluY SINE Alu 1 299 -12 590 227 93 65 chr2 102485706 102485902 -148201952 - L1MC5 LINE L1 -48 7913 7705 2106 107 10 20 chr2 102485902 102486202 -148201652 + AluSq SINE Alu 1 297 -16 590 227 93 65 chr2 102486202 102486283 -148201571 - L1MC5 LINE L1 -256 7705 7628 349 184 35 53 chr2 102486287 102486401 -148201453 - L1MC5 LINE L1 -179 7782 7671 2073 123 0 3 chr2 102486511 102486795 -148201059 - AluSx SINE Alu -29 283 1 2244 115 3 13 chr2 102487978 102488291 -148199563 + AluSx SINE Alu 1 310 -2 656 247 84 45 chr2 102488416 102488994 -148198860 - L1MC5 LINE L1 -50 7911 7270 2396 61 0 20 chr2 102489160 102489453 -148198401 - AluY SINE Alu -15 296 10 2154 122 0 3 chr2 102489453 102489741 -148198113 - AluSx SINE Alu -25 287 1 25 0 0 0 chr2 102490926 102490951 -148196903 + AT_rich Low_complexity Low_complexity 1 25 0 2352 92 10 0 chr2 102491914 102492209 -148195645 - AluSx SINE Alu -14 298 1 24 0 0 0 chr2 102492816 102492840 -148195014 + AT_rich Low_complexity Low_complexity 1 24 0 2223 125 0 0 chr2 102492950 102493255 -148194599 + AluSx SINE Alu 1 305 -7 240 35 0 0 chr2 102493272 102493301 -148194553 + (GAA)n Simple_repeat Simple_repeat 2 30 0 2300 118 0 6 chr2 102493351 102493664 -148194190 + AluSx SINE Alu 1 311 -1 2417 86 0 3 chr2 102493672 102493974 -148193880 + AluSq SINE Alu 1 301 -12 407 265 14 20 chr2 102493976 102494123 -148193731 + L1M4 LINE L1 2954 3099 -3047 182 239 0 0 chr2 102494249 102494295 -148193559 + L2 LINE L2 3268 3313 0 1388 176 11 37 chr2 102494319 102494671 -148193183 - Charlie5 DNA MER1_type -36 2576 2234 434 161 143 36 chr2 102494668 102494780 -148193074 - Charlie5 DNA MER1_type -2485 127 4 * 673 144 0 0 chr2 102494912 102495016 -148192838 + AluJb SINE Alu 3 106 -206 1003 84 22 22 chr2 102495020 102495031 -148192823 + (GAAA)n Simple_repeat Simple_repeat 1 190 0 1003 84 22 22 chr2 102495031 102495210 -148192644 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 3646 133 2 6 chr2 102496154 102496682 -148191172 + MER1A DNA MER1_type 1 526 -1 490 248 56 41 chr2 102496707 102496839 -148191015 + L1ME LINE L1 5517 5614 -507 2257 111 13 0 chr2 102496839 102496965 -148190889 + AluSx SINE Alu 1 124 -188 333 82 0 0 chr2 102496965 102497014 -148190840 + (CA)n Simple_repeat Simple_repeat 2 50 0 2257 111 13 0 chr2 102497014 102497185 -148190669 + AluSx SINE Alu 124 302 -10 490 248 56 41 chr2 102497185 102497308 -148190546 + L1ME LINE L1 5614 5734 -387 795 158 0 38 chr2 102497396 102497529 -148190325 - FLAM_C SINE Alu -5 128 1 5588 225 61 11 chr2 102497757 102499401 -148188453 - L1MEc LINE L1 -2218 4426 2701 1828 164 3 10 chr2 102499429 102499728 -148188126 - AluJo SINE Alu -15 297 1 1111 184 129 110 chr2 102499740 102500196 -148187658 + MER4C LTR ERV1 1 465 0 466 254 99 35 chr2 102500675 102500876 -148186978 - L1M4 LINE L1 -6309 233 20 199 269 278 0 chr2 102501275 102501383 -148186471 - MIR SINE MIR 0 262 125 237 237 0 34 chr2 102501750 102501809 -148186045 - MIR SINE MIR -62 146 90 1668 197 71 12 chr2 102502742 102503163 -148184691 - L1MEc LINE L1 -4063 2762 2317 1001 75 0 0 chr2 102503164 102503306 -148184548 - AluY SINE Alu 0 310 169 308 242 3 7 chr2 102503310 102503447 -148184407 + L1MDa LINE L1 1284 1466 -4916 3226 208 45 104 chr2 102503449 102504448 -148183406 - L1MEc LINE L1 -5420 1405 466 344 377 0 9 chr2 102504830 102504944 -148182910 - L2 LINE L2 0 3272 3160 225 83 0 0 chr2 102505342 102505378 -148182476 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 1637 104 158 0 chr2 102505378 102505619 -148182235 - AluSp SINE Alu -30 283 5 2089 108 0 0 chr2 102505644 102505912 -148181942 - AluSx SINE Alu -44 268 1 588 169 27 34 chr2 102506102 102506250 -148181604 - L1MA10 LINE L1 0 6334 6188 239 193 18 149 chr2 102506289 102506403 -148181451 + MIR3 SINE MIR 79 177 -31 2108 147 0 0 chr2 102507018 102507330 -148180524 + AluSx SINE Alu 1 312 0 2174 113 17 0 chr2 102507694 102507986 -148179868 + AluSg SINE Alu 1 297 -13 332 119 17 0 chr2 102508001 102508060 -148179794 + (TTCA)n Simple_repeat Simple_repeat 2 61 0 289 340 53 0 chr2 102508067 102508217 -148179637 + L2 LINE L2 2924 3081 -191 749 228 77 38 chr2 102508311 102508757 -148179097 - MLT1H LTR MaLR 0 549 5 21 57 0 0 chr2 102508883 102508918 -148178936 + AT_rich Low_complexity Low_complexity 1 35 0 2315 93 0 3 chr2 102508925 102509216 -148178638 + AluSx SINE Alu 1 290 -22 2607 39 7 7 chr2 102509693 102510001 -148177853 - AluY SINE Alu -3 308 1 304 306 126 10 chr2 102510076 102510275 -148177579 + MIR SINE MIR 22 243 -19 377 271 49 25 chr2 102510792 102510914 -148176940 + MER45A DNA AcHobo 54 178 0 2197 101 35 0 chr2 102511156 102511443 -148176411 + AluSx SINE Alu 1 297 -15 25 65 0 0 chr2 102511482 102511528 -148176326 + AT_rich Low_complexity Low_complexity 1 46 0 752 168 0 0 chr2 102511624 102511755 -148176099 + FLAM_C SINE Alu 1 131 -12 186 133 0 0 chr2 102511755 102511785 -148176069 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 2058 129 44 30 chr2 102511800 102512039 -148175815 + MLT1B LTR MaLR 21 268 -122 2314 105 0 0 chr2 102512039 102512333 -148175521 + AluSx SINE Alu 1 294 -18 2058 129 44 30 chr2 102512333 102512458 -148175396 + MLT1B LTR MaLR 268 390 0 1806 160 7 10 chr2 102512959 102513252 -148174602 + AluJb SINE Alu 3 294 -18 2301 109 3 0 chr2 102513839 102514141 -148173713 + AluSq SINE Alu 1 303 -10 472 226 23 15 chr2 102515990 102516123 -148171731 + MIR SINE MIR 13 146 -116 2393 78 0 0 chr2 102516939 102517223 -148170631 - AluSg SINE Alu -20 290 7 2244 117 0 0 chr2 102518015 102518323 -148169531 + AluSg SINE Alu 1 308 -2 352 270 63 0 chr2 102518640 102518751 -148169103 - L2 LINE L2 -24 3289 3172 1630 143 6 116 chr2 102518759 102519094 -148168760 + AluJo SINE Alu 1 298 -4 371 252 133 29 chr2 102519127 102519337 -148168517 - L2 LINE L2 -258 3055 2824 938 219 94 0 chr2 102519452 102519676 -148168178 + MIR SINE MIR 2 246 -16 2663 181 13 17 chr2 102519711 102520264 -148167590 - L1MDb LINE L1 -4770 1701 848 262 239 60 0 chr2 102520687 102520754 -148167100 - L1MDb LINE L1 -6211 329 259 2508 127 9 94 chr2 102520895 102521470 -148166384 - L1 LINE L1 -1438 4708 4183 329 248 107 16 chr2 102521485 102521606 -148166248 + L2 LINE L2 3182 3313 0 509 270 160 0 chr2 102521640 102521840 -148166014 + MIR SINE MIR 31 262 0 2268 118 0 0 chr2 102522543 102522839 -148165015 - AluSg SINE Alu -14 296 1 2331 109 3 0 chr2 102523016 102523328 -148164526 - AluSp SINE Alu 0 313 1 745 256 64 0 chr2 102524300 102524503 -148163351 + MIR SINE MIR 17 232 -30 525 200 70 92 chr2 102525502 102525687 -148162167 - L1ME3A LINE L1 -219 5951 5771 459 206 39 0 chr2 102525688 102525790 -148162064 - MIR SINE MIR -81 181 76 378 61 0 0 chr2 102525820 102525869 -148161985 + (TA)n Simple_repeat Simple_repeat 1 49 0 1836 138 38 7 chr2 102525869 102526160 -148161694 - AluJb SINE Alu -11 301 2 744 285 63 37 chr2 102526160 102526375 -148161479 - L1ME3A LINE L1 -383 5787 5562 1924 137 0 0 chr2 102526375 102526652 -148161202 - AluSx SINE Alu -9 303 27 744 285 63 37 chr2 102526652 102526706 -148161148 - L1ME3A LINE L1 -608 5562 5511 434 254 8 0 chr2 102526713 102526839 -148161015 - L1ME3A LINE L1 -709 5453 5327 1095 234 58 61 chr2 102526975 102527439 -148160415 + L1MDb LINE L1 353 948 -5595 * 1667 215 49 9 chr2 102527430 102527881 -148159973 + L1MDb LINE L1 1692 2160 -4380 1572 229 22 30 chr2 102527894 102528477 -148159377 + L1MDb LINE L1 2207 2785 -3755 2600 111 54 45 chr2 102528477 102528854 -148159000 - MSTC LTR MaLR 0 428 45 2396 80 0 13 chr2 102528854 102529156 -148158698 + AluY SINE Alu 1 298 -13 2600 111 54 45 chr2 102529156 102529202 -148158652 - MSTC LTR MaLR -383 45 1 1572 229 22 30 chr2 102529202 102529277 -148158577 + L1MDb LINE L1 2785 2859 -3681 193 256 0 0 chr2 102529685 102529724 -148158130 - L2 LINE L2 -80 3192 3154 590 174 104 9 chr2 102529932 102530204 -148157650 - MLT1A1 LTR MaLR 0 374 45 228 180 0 0 chr2 102530201 102530251 -148157603 - AluSq SINE Alu 0 302 253 * 1581 98 5 0 chr2 102530251 102530456 -148157398 - AluSq SINE Alu -107 206 1 2003 200 45 40 chr2 102530818 102531312 -148156542 - MLT1D LTR MaLR -9 496 1 1546 174 6 65 chr2 102531926 102532247 -148155607 - AluJo SINE Alu -6 306 5 1016 237 39 11 chr2 102532285 102532564 -148155290 - L1MA4 LINE L1 -11 6289 6003 6614 45 2 0 chr2 102533442 102534234 -148153620 - L1PA6 LINE L1 -2 6152 5359 2293 116 0 3 chr2 102535189 102535491 -148152363 - AluSq SINE Alu -10 303 3 1903 91 3 45 chr2 102537980 102538266 -148149588 - AluSx SINE Alu 0 312 39 1962 121 4 0 chr2 102538445 102538709 -148149145 - AluSx SINE Alu -39 273 9 650 243 95 18 chr2 102538726 102538948 -148148906 - L1M4 LINE L1 -1164 4982 4744 8059 127 51 19 chr2 102539075 102539986 -148147868 + Tigger1 DNA MER2_type 2 966 -1452 2348 105 7 0 chr2 102539986 102540292 -148147562 - AluSq SINE Alu -5 308 1 8059 127 51 19 chr2 102540292 102540661 -148147193 + Tigger1 DNA MER2_type 966 1322 -1096 426 227 0 0 chr2 102540662 102540737 -148147117 + AluJ/FLAM SINE Alu 1 75 -227 2777 145 7 0 chr2 102540837 102541245 -148146609 + HSMAR2 DNA Mariner 828 1238 -64 760 154 8 0 chr2 102541254 102541377 -148146477 + FLAM_A SINE Alu 10 133 -9 346 113 16 0 chr2 102541378 102541440 -148146414 + HSMAR2 DNA Mariner 1240 1302 0 481 202 0 16 chr2 102541458 102541587 -148146267 + (TATG)n Simple_repeat Simple_repeat 2 128 0 198 382 0 0 chr2 102542199 102542288 -148145566 + MIR3 SINE MIR 78 166 -42 1848 140 6 35 chr2 102542921 102543235 -148144619 + AluJo SINE Alu 1 305 -7 2263 86 21 0 chr2 102543235 102543526 -148144328 + AluY SINE Alu 1 297 -14 949 247 181 13 chr2 102543780 102544177 -148143677 - LTR16B LTR ERVL 0 464 1 348 24 0 0 chr2 102544475 102544516 -148143338 + (TG)n Simple_repeat Simple_repeat 2 42 0 1816 164 10 13 chr2 102545771 102546075 -148141779 + AluJb SINE Alu 1 303 -9 447 161 44 22 chr2 102546075 102546212 -148141642 + GA-rich Low_complexity Low_complexity 1 140 0 235 173 0 58 chr2 102546403 102546455 -148141399 + Alu SINE Alu 251 299 0 655 159 53 0 chr2 102546455 102546625 -148141229 + GA-rich Low_complexity Low_complexity 2 180 0 234 0 0 0 chr2 102547858 102547884 -148139970 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 180 274 27 55 chr2 102548629 102548702 -148139152 - L2 LINE L2 -1389 1925 1855 2079 118 0 56 chr2 102548959 102549282 -148138572 - AluSx SINE Alu -3 309 5 384 216 31 4 chr2 102549815 102549921 -148137933 - L1MEc LINE L1 -3791 2424 2327 * 2433 169 47 109 chr2 102549920 102550158 -148137696 + L1MB4 LINE L1 5519 5770 -410 232 255 0 0 chr2 102550158 102550209 -148137645 - MLT2D LTR ERVL 0 414 364 2433 169 47 109 chr2 102550209 102550625 -148137229 + L1MB4 LINE L1 5770 6179 -1 357 232 11 0 chr2 102550659 102550754 -148137100 + L1M4 LINE L1 3880 3975 -2171 2166 136 0 0 chr2 102550754 102551055 -148136799 + AluSx SINE Alu 1 301 -11 14028 180 29 17 chr2 102551229 102553089 -148134765 - L1 LINE L1 -1088 5760 3925 2289 94 0 0 chr2 102553089 102553376 -148134478 + AluSx SINE Alu 1 287 -25 14028 180 29 17 chr2 102553376 102553998 -148133856 - L1 LINE L1 -2923 3925 3312 2263 150 81 69 chr2 102553998 102554346 -148133508 - MER66B LTR ERV1 0 486 144 2159 109 3 10 chr2 102554346 102554640 -148133214 - AluSx SINE Alu -20 292 1 2263 150 81 69 chr2 102554640 102554687 -148133167 - MER66B LTR ERV1 -342 144 99 2124 133 3 0 chr2 102554687 102554988 -148132866 - AluSq SINE Alu -11 302 1 2263 150 81 69 chr2 102554988 102555071 -148132783 - MER66B LTR ERV1 -387 99 1 14028 180 29 17 chr2 102555071 102555562 -148132292 - L1 LINE L1 -3536 3312 2748 360 192 16 72 chr2 102555989 102556114 -148131740 + LTR41 LTR ERVL 650 767 -6 1257 245 86 48 chr2 102556114 102556213 -148131641 + L1M4 LINE L1 3995 4089 -2057 2363 92 0 10 chr2 102556213 102556517 -148131337 + AluSq SINE Alu 1 301 -12 1257 245 86 48 chr2 102556517 102557021 -148130833 + L1M4 LINE L1 4089 4621 -1525 528 133 0 0 chr2 102557045 102557120 -148130734 - AluSg/x SINE Alu -17 293 219 182 239 22 0 chr2 102557484 102557530 -148130324 + MIR3 SINE MIR 114 160 -48 313 232 29 0 chr2 102557531 102557600 -148130254 - MER2 DNA MER2_type 0 345 275 2034 110 10 40 chr2 102557602 102557902 -148129952 + AluSx SINE Alu 4 294 -18 1635 212 112 37 chr2 102558208 102558401 -148129453 + MLT1C LTR MaLR 6 183 -284 369 0 0 0 chr2 102558401 102558442 -148129412 + (CA)n Simple_repeat Simple_repeat 2 42 0 1635 212 112 37 chr2 102558442 102558678 -148129176 + MLT1C LTR MaLR 183 467 0 357 243 68 40 chr2 102558779 102558927 -148128927 + MIR SINE MIR 104 255 -7 231 214 0 0 chr2 102559289 102559331 -148128523 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 2436 70 3 7 chr2 102559398 102559697 -148128157 + AluSg1 SINE Alu 1 298 -11 289 274 63 47 chr2 102560683 102560873 -148126981 + MER117 DNA MER1_type 3 195 -2 2183 113 0 13 chr2 102561165 102561466 -148126388 - AluSq SINE Alu -12 301 5 697 141 22 0 chr2 102561565 102561700 -148126154 + GA-rich Low_complexity Low_complexity 3 140 0 1824 135 0 49 chr2 102561760 102562064 -148125790 - AluJo SINE Alu -19 293 5 2278 129 0 0 chr2 102563123 102563433 -148124421 + AluSg SINE Alu 1 310 0 4537 132 10 14 chr2 102564962 102565106 -148122748 - MER50 LTR ERV1 -23 711 568 2486 76 0 10 chr2 102565106 102565409 -148122445 + AluSx SINE Alu 1 300 -12 4537 132 10 14 chr2 102565409 102565978 -148121876 - MER50 LTR ERV1 -166 568 1 1322 237 64 5 chr2 102566167 102566559 -148121295 + Charlie2a DNA MER1_type 689 1103 -1759 478 232 20 20 chr2 102566558 102566709 -148121145 + Charlie2a DNA MER1_type 2239 2389 -473 * 784 217 211 3 chr2 102566954 102567286 -148120568 + Charlie2a DNA MER1_type 2457 2857 -5 1960 133 34 7 chr2 102567349 102567642 -148120212 - AluSx SINE Alu 0 312 12 403 203 0 0 chr2 102567824 102567898 -148119956 + MER66B LTR ERV1 1 74 -412 1426 124 0 0 chr2 102567907 102568093 -148119761 + AluSq SINE Alu 1 186 -127 2052 106 7 4 chr2 102568093 102568368 -148119486 - AluSp SINE Alu -32 281 6 1297 101 17 11 chr2 102568434 102568612 -148119242 + AluJb SINE Alu 1 179 -133 4307 131 50 4 chr2 102568612 102569290 -148118564 + MER50 LTR ERV1 3 711 -23 655 169 0 52 chr2 102569291 102569427 -148118427 + AluJb SINE Alu 176 304 -8 186 317 125 0 chr2 102569723 102569827 -148118027 + L2 LINE L2 2439 2555 -759 934 114 0 15 chr2 102571268 102571400 -148116454 - FLAM_C SINE Alu 0 133 4 1737 237 59 0 chr2 102571878 102572287 -148115567 + L1ME3A LINE L1 5717 6149 -21 2127 98 14 0 chr2 102572298 102572574 -148115280 - AluSx SINE Alu -26 286 7 1575 164 58 20 chr2 102574034 102574196 -148113658 - AluJo SINE Alu -8 304 125 2425 80 3 0 chr2 102574196 102574497 -148113357 - AluY SINE Alu -9 302 1 1575 164 58 20 chr2 102574497 102574627 -148113227 - AluJo SINE Alu -187 125 1 606 287 51 13 chr2 102575193 102575430 -148112424 + MIR SINE MIR 8 253 -9 2266 113 0 0 chr2 102575512 102575814 -148112040 - AluSx SINE Alu 0 312 11 359 349 88 4 chr2 102575895 102576133 -148111721 - L3 LINE CR1 -75 1502 1245 341 251 108 66 chr2 102576305 102576472 -148111382 + MLT1K LTR MaLR 67 240 -348 2202 110 10 0 chr2 102576542 102576832 -148111022 - AluSg SINE Alu -17 293 1 354 162 0 40 chr2 102576980 102577054 -148110800 + MLT1K LTR MaLR 518 588 0 2356 91 3 0 chr2 102577515 102577813 -148110041 - AluSp SINE Alu -14 299 1 1134 68 0 0 chr2 102577815 102577947 -148109907 - AluSp SINE Alu -181 132 1 2211 127 57 8 chr2 102578039 102578409 -148109445 - MLT1B LTR MaLR 0 390 3 376 286 24 54 chr2 102579261 102579429 -148108425 + L2 LINE L2 2889 3051 -262 397 192 0 0 chr2 102579462 102579535 -148108319 + MER5A DNA MER1_type 1 73 -116 1358 32 0 0 chr2 102579535 102579693 -148108161 - L1P2 LINE L1 -605 5549 5392 237 65 0 0 chr2 102579693 102579724 -148108130 + (A)n Simple_repeat Simple_repeat 1 31 0 1253 172 128 0 chr2 102579734 102579961 -148107893 + AluSg SINE Alu 1 256 -54 724 30 20 10 chr2 102579964 102580063 -148107791 + (GAAA)n Simple_repeat Simple_repeat 1 100 0 275 206 315 0 chr2 102580063 102580155 -148107699 + MER5A DNA MER1_type 66 186 -3 2164 126 0 0 chr2 102580238 102580531 -148107323 + AluSq SINE Alu 1 293 -20 1171 154 0 0 chr2 102580549 102580724 -148107130 + AluSg/x SINE Alu 133 307 -5 1020 216 0 0 chr2 102580726 102580930 -148106924 - L1MA6 LINE L1 -10 6290 6087 4640 119 6 30 chr2 102580931 102581269 -148106585 - L1MA6 LINE L1 -310 5990 5645 2072 117 0 13 chr2 102581269 102581568 -148106286 - AluSx SINE Alu -17 295 1 4640 119 6 30 chr2 102581568 102582124 -148105730 - L1MA6 LINE L1 -655 5645 5120 1137 204 13 0 chr2 102582119 102582350 -148105504 - L1MA6 LINE L1 -986 5160 4927 * 867 142 0 0 chr2 102582351 102582485 -148105369 - AluSg/x SINE Alu -6 306 173 444 167 0 150 chr2 102582493 102582613 -148105241 - L1MA6 LINE L1 -1234 4912 4811 1277 186 22 32 chr2 102583266 102583610 -148104244 - AluJb SINE Alu 0 312 1 199 330 165 0 chr2 102584297 102584406 -148103448 - L2 LINE L2 -7 3306 3180 330 236 28 28 chr2 102585174 102585280 -148102574 + MIR3 SINE MIR 87 192 -16 2296 110 0 0 chr2 102585367 102585659 -148102195 - AluSq SINE Alu -21 292 1 218 259 35 47 chr2 102586272 102586357 -148101497 - MIR3 SINE MIR -38 170 87 12934 102 39 25 chr2 102586624 102586807 -148101047 - Tigger1 DNA MER2_type 0 2418 2239 1795 179 0 16 chr2 102586807 102587120 -148100734 + AluSx SINE Alu 1 308 -4 12934 102 39 25 chr2 102587120 102588027 -148099827 - Tigger1 DNA MER2_type -179 2239 1346 2282 87 0 0 chr2 102588027 102588304 -148099550 - AluY SINE Alu -19 292 16 12934 102 39 25 chr2 102588304 102589131 -148098723 - Tigger1 DNA MER2_type -1072 1346 469 2524 50 3 3 chr2 102589131 102589429 -148098425 + AluY SINE Alu 1 298 -13 12934 102 39 25 chr2 102589429 102589470 -148098384 - Tigger1 DNA MER2_type -1949 469 430 1534 146 20 12 chr2 102589720 102589974 -148097880 - AluSq SINE Alu -57 256 1 1389 131 5 27 chr2 102590367 102590589 -148097265 + AluJo SINE Alu 85 301 -11 2163 133 0 7 chr2 102590589 102590891 -148096963 + AluSx SINE Alu 1 300 -12 1264 173 28 28 chr2 102590895 102591143 -148096711 + AluJo SINE Alu 39 286 -26 2848 19 0 0 chr2 102591312 102591623 -148096231 + AluYa5 SINE Alu 1 311 0 1942 204 46 24 chr2 102592196 102592366 -148095488 - L1ME2 LINE L1 -10 6154 5985 551 318 43 34 chr2 102592366 102592693 -148095161 - L1MB2 LINE L1 -191 5980 5651 2531 52 0 55 chr2 102592726 102593055 -148094799 - AluY SINE Alu 0 311 1 2236 125 0 6 chr2 102593391 102593704 -148094150 + AluSx SINE Alu 1 311 -1 1158 321 61 6 chr2 102594156 102594682 -148093172 + HAL1 LINE L1 110 664 -1843 479 224 0 10 chr2 102594696 102594794 -148093060 + MLT1B LTR MaLR 294 390 0 2497 81 0 0 chr2 102594819 102595128 -148092726 + AluY SINE Alu 1 309 -2 2155 135 0 6 chr2 102595152 102595464 -148092390 + AluSx SINE Alu 3 312 0 3036 246 125 65 chr2 102595474 102595973 -148091881 + HAL1 LINE L1 673 1141 -1366 1827 180 10 0 chr2 102595973 102596278 -148091576 + AluJb SINE Alu 1 308 -4 3036 246 125 65 chr2 102596278 102596895 -148090959 + HAL1 LINE L1 1141 1720 -787 2505 158 22 26 chr2 102596895 102597358 -148090496 + LOR1b LTR ERV1 1 461 0 3036 246 125 65 chr2 102597358 102597964 -148089890 + HAL1 LINE L1 1720 2499 -8 2129 114 3 10 chr2 102598006 102598304 -148089550 - AluSx SINE Alu -14 298 3 2502 92 0 0 chr2 102598762 102599068 -148088786 - AluSx SINE Alu -6 306 1 2534 146 39 57 chr2 102600020 102600533 -148087321 + MLT1D LTR MaLR 2 505 0 700 189 8 152 chr2 102600635 102600704 -148087150 - MER3 DNA MER1_type 0 209 132 1709 168 11 11 chr2 102600704 102600978 -148086876 + AluJb SINE Alu 13 286 -26 700 189 8 152 chr2 102600978 102601152 -148086702 - MER3 DNA MER1_type -77 132 1 640 115 0 0 chr2 102601293 102601389 -148086465 - AluSg/x SINE Alu 0 312 217 1344 176 74 35 chr2 102601737 102601993 -148085861 - AluJo SINE Alu -44 268 3 448 294 144 62 chr2 102602177 102602723 -148085131 - L1M4 LINE L1 -1375 4771 4272 2211 42 0 0 chr2 102602723 102602988 -148084866 - L1PA4 LINE L1 -3 6152 5888 448 294 144 62 chr2 102602988 102603387 -148084467 - L1M4 LINE L1 -1874 4272 3907 279 0 0 0 chr2 102603387 102603418 -148084436 + (TA)n Simple_repeat Simple_repeat 2 32 0 2487 70 0 0 chr2 102603418 102603719 -148084135 - AluY SINE Alu -10 301 1 448 294 144 62 chr2 102603719 102603858 -148083996 - L1M4 LINE L1 -2238 3908 3595 2373 81 7 3 chr2 102603986 102604284 -148083570 - AluSx SINE Alu -13 299 1 2701 170 17 6 chr2 102604315 102604798 -148083056 + L1MB4 LINE L1 5692 6179 -1 1993 134 10 0 chr2 102605208 102605498 -148082356 - AluSq SINE Alu -20 293 1 2278 94 14 3 chr2 102605498 102605795 -148082059 - AluSq SINE Alu -8 305 6 854 110 24 8 chr2 102605997 102606124 -148081730 - FLAM_C SINE Alu -14 129 1 309 169 0 0 chr2 102606214 102606273 -148081581 + (TATG)n Simple_repeat Simple_repeat 2 60 0 311 238 138 30 chr2 102606290 102606559 -148081295 - L1M4 LINE L1 -3510 2636 2339 1834 143 36 17 chr2 102606569 102606870 -148080984 - AluSc SINE Alu -2 307 1 2007 135 0 14 chr2 102606899 102607229 -148080625 - AluSx SINE Alu 0 326 1 601 252 107 60 chr2 102607275 102607313 -148080541 - HAL1 LINE L1 -24 2483 2448 1826 153 22 29 chr2 102607313 102607627 -148080227 + AluJo SINE Alu 1 312 0 601 252 107 60 chr2 102607627 102607735 -148080119 - HAL1 LINE L1 -59 2448 2347 2049 104 0 53 chr2 102607735 102608034 -148079820 + AluSx SINE Alu 4 286 -26 234 0 0 0 chr2 102608037 102608063 -148079791 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 601 252 107 60 chr2 102608063 102608331 -148079523 - HAL1 LINE L1 -161 2346 2044 1336 226 83 71 chr2 102608392 102608471 -148079383 - HAL1 LINE L1 -867 1640 1563 2316 88 20 3 chr2 102608471 102608777 -148079077 - AluY SINE Alu 0 311 1 1336 226 83 71 chr2 102608777 102608986 -148078868 - HAL1 LINE L1 -944 1563 1358 4155 116 75 63 chr2 102608986 102609762 -148078092 - LTR1 LTR ERV1 0 785 1 1336 226 83 71 chr2 102609762 102610038 -148077816 - HAL1 LINE L1 -1149 1358 1068 971 136 0 14 chr2 102610134 102610281 -148077573 + AluJb SINE Alu 1 145 -167 2188 90 42 3 chr2 102610281 102610569 -148077285 + AluSg SINE Alu 1 299 -11 954 205 11 0 chr2 102610600 102610785 -148077069 + AluJb SINE Alu 120 306 -6 879 252 69 94 chr2 102610796 102610913 -148076941 - HAL1 LINE L1 -1514 993 875 1788 141 59 0 chr2 102610913 102611203 -148076651 - AluJo SINE Alu -5 307 1 879 252 69 94 chr2 102611203 102611636 -148076218 - HAL1 LINE L1 -1632 875 457 541 276 92 62 chr2 102611644 102611981 -148075873 - HAL1 LINE L1 -2114 393 47 1412 128 5 202 chr2 102612019 102612395 -148075459 - AluJo SINE Alu 0 302 1 2211 64 21 0 chr2 102612589 102612625 -148075229 - AluY SINE Alu 0 345 311 186 43 0 0 chr2 102612625 102612648 -148075206 + (TA)n Simple_repeat Simple_repeat 2 24 0 2211 64 21 0 chr2 102612648 102612928 -148074926 - AluY SINE Alu -34 311 1 250 281 7 122 chr2 102613319 102613381 -148074473 + MLT1I LTR MaLR 173 212 -197 2387 83 3 0 chr2 102613381 102613681 -148074173 + AluY SINE Alu 10 310 -1 250 281 7 122 chr2 102613681 102613757 -148074097 + MLT1I LTR MaLR 212 295 -114 2097 123 106 75 chr2 102614002 102614417 -148073437 - MSTA LTR MaLR 0 428 1 306 329 34 27 chr2 102614680 102614826 -148073028 - HAL1 LINE L1 -738 1769 1623 2724 45 0 0 chr2 102614883 102615194 -148072660 + AluY SINE Alu 1 311 0 615 291 71 56 chr2 102615741 102616278 -148071576 - HAL1 LINE L1 -865 1642 1098 898 32 129 8 chr2 102616330 102616454 -148071400 + MER85 DNA T2_type 1 139 0 365 271 45 68 chr2 102616659 102616836 -148071018 - HAL1 LINE L1 -1513 994 822 2270 99 3 3 chr2 102616857 102617151 -148070703 - AluSg SINE Alu -16 294 1 1906 145 3 10 chr2 102617357 102617660 -148070194 - AluSx SINE Alu -11 301 1 2257 97 3 13 chr2 102619647 102619958 -148067896 - AluSp SINE Alu -5 308 1 339 122 24 61 chr2 102621140 102621222 -148066632 - L1MC5 LINE L1 -562 7399 7321 209 336 138 0 chr2 102621334 102621450 -148066404 + MIR3 SINE MIR 37 168 -40 404 232 7 19 chr2 102621562 102621717 -148066137 + (TA)n Simple_repeat Simple_repeat 1 153 0 708 141 209 68 chr2 102621717 102621894 -148065960 - AluJo SINE Alu -25 287 86 425 214 62 9 chr2 102621970 102622082 -148065772 - L1ME3 LINE L1 -2 6160 6043 2091 138 0 3 chr2 102622460 102622765 -148065089 - AluSx SINE Alu -8 304 1 2091 134 10 0 chr2 102623948 102624246 -148063608 + AluSx SINE Alu 1 301 -11 544 345 27 5 chr2 102624264 102624487 -148063367 + MIR SINE MIR 12 239 -23 2130 136 3 0 chr2 102625059 102625369 -148062485 + AluSx SINE Alu 1 311 -1 25 0 0 0 chr2 102625850 102625875 -148061979 + AT_rich Low_complexity Low_complexity 1 25 0 1624 141 68 19 chr2 102625875 102626138 -148061716 - AluJo SINE Alu -26 286 11 2189 119 3 10 chr2 102626190 102626493 -148061361 - AluSx SINE Alu -11 301 1 747 174 8 23 chr2 102626631 102626763 -148061091 + MER44D DNA MER2_type 1 400 -209 688 144 125 46 chr2 102626767 102626918 -148060936 - MSTA LTR MaLR -141 234 83 * 1162 146 30 10 chr2 102626916 102627115 -148060739 + MER44D DNA MER2_type 406 608 -1 2446 95 0 0 chr2 102627288 102627593 -148060261 + AluSg SINE Alu 2 306 -4 622 129 0 69 chr2 102627614 102627730 -148060124 + MLT1C LTR MaLR 1 108 -359 3982 122 11 111 chr2 102627736 102627968 -148059886 - MER50 LTR ERV1 -25 709 456 2253 96 3 3 chr2 102627968 102628269 -148059585 - AluSc SINE Alu -8 301 1 3982 122 11 111 chr2 102628269 102628823 -148059031 - MER50 LTR ERV1 -278 456 1 1465 208 48 12 chr2 102628826 102629163 -148058691 + MLT1C LTR MaLR 119 467 0 2019 103 0 75 chr2 102629199 102629520 -148058334 + AluSx SINE Alu 1 297 -15 2420 67 6 35 chr2 102630138 102630452 -148057402 - AluY SINE Alu -6 305 1 2015 133 65 99 chr2 102630518 102630696 -148057158 + MSTA LTR MaLR 1 183 -245 1696 138 10 69 chr2 102630696 102631001 -148056853 + AluSx SINE Alu 1 287 -25 2015 133 65 99 chr2 102631001 102631265 -148056589 + MSTA LTR MaLR 183 428 0 2302 93 30 0 chr2 102632113 102632415 -148055439 - AluSq SINE Alu -2 311 1 35 24 0 0 chr2 102633323 102633365 -148054489 + AT_rich Low_complexity Low_complexity 1 42 0 1962 143 13 3 chr2 102633447 102633747 -148054107 + AluJb SINE Alu 1 303 -9 1649 161 33 33 chr2 102633789 102634088 -148053766 - AluJo SINE Alu -13 299 1 595 215 80 18 chr2 102634192 102634355 -148053499 + LTR16C LTR ERVL 316 488 -3 270 259 25 0 chr2 102634731 102634812 -148053042 - MIR3 SINE MIR -34 174 92 240 200 0 0 chr2 102635355 102635410 -148052444 + CT-rich Low_complexity Low_complexity 2 56 0 2184 105 0 0 chr2 102635414 102635691 -148052163 - AluSg SINE Alu -33 277 1 2139 110 7 29 chr2 102635707 102636017 -148051837 - AluSx SINE Alu -9 303 1 1295 224 10 85 chr2 102636280 102636669 -148051185 + MLT1A2 LTR MaLR 4 363 -11 194 224 106 47 chr2 102637276 102637361 -148050493 + L2 LINE L2 3197 3286 -27 284 320 49 53 chr2 102637572 102637797 -148050057 + MIR SINE MIR 31 254 -8 2149 103 7 0 chr2 102637802 102638108 -148049746 + AluSx SINE Alu 1 308 0 244 304 48 56 chr2 102638421 102638546 -148049308 + MIR SINE MIR 28 151 -111 381 282 35 14 chr2 102638692 102638834 -148049020 + MER5A DNA MER1_type 6 150 -39 268 263 0 0 chr2 102639777 102639853 -148048001 + C-rich Low_complexity Low_complexity 4 79 0 41 90 0 0 chr2 102639895 102640006 -148047848 + GC_rich Low_complexity Low_complexity 1 111 0 27 0 0 0 chr2 102640098 102640125 -148047729 + GC_rich Low_complexity Low_complexity 1 27 0 266 198 11 55 chr2 102640303 102640394 -148047460 + (CGGG)n Simple_repeat Simple_repeat 4 90 0 24 85 0 0 chr2 102640472 102640531 -148047323 + GC_rich Low_complexity Low_complexity 1 59 0 2089 123 17 13 chr2 102644028 102644329 -148043525 - AluSx SINE Alu -10 302 1 2314 102 0 10 chr2 102644450 102644755 -148043099 + AluSq SINE Alu 3 304 -9 2123 109 0 0 chr2 102645528 102645803 -148042051 + AluSx SINE Alu 29 303 -9 2198 95 10 13 chr2 102645896 102646202 -148041652 + AluSg SINE Alu 1 305 -5 189 0 0 0 chr2 102646686 102646707 -148041147 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 243 0 0 0 chr2 102646706 102646733 -148041121 + (TA)n Simple_repeat Simple_repeat 2 28 0 1670 78 60 0 chr2 102646733 102646950 -148040904 - AluSg/x SINE Alu -8 302 73 249 380 0 0 chr2 102647391 102647470 -148040384 - L2 LINE L2 -36 3277 3199 331 203 163 8 chr2 102647669 102647792 -148040062 - MER5C DNA MER1_type -82 242 101 186 139 28 0 chr2 102647874 102647910 -148039944 - MER5A DNA MER1_type -152 37 1 737 249 140 90 chr2 102648303 102649039 -148038815 - HAL1 LINE L1 -110 2397 1625 239 315 41 55 chr2 102649086 102649232 -148038622 - HAL1 LINE L1 -2044 463 320 1989 146 13 0 chr2 102649365 102649673 -148038181 - AluSx SINE Alu 0 312 1 1238 169 44 64 chr2 102649691 102649845 -148038009 - AluJb SINE Alu -26 286 137 2363 78 0 34 chr2 102649845 102650165 -148037689 - AluY SINE Alu -2 309 1 1238 169 44 64 chr2 102650165 102650259 -148037595 - AluJb SINE Alu -175 137 43 205 183 33 0 chr2 102650474 102650534 -148037320 + (CAA)n Simple_repeat Simple_repeat 2 63 0 1174 259 110 0 chr2 102650762 102651166 -148036688 - L1MB7 LINE L1 0 6184 5735 2244 117 0 0 chr2 102651367 102651667 -148036187 - AluSx SINE Alu -12 300 1 324 328 28 44 chr2 102652637 102652817 -148035037 - L2 LINE L2 -1 3312 3136 1615 133 0 0 chr2 102653494 102653719 -148034135 - AluSx SINE Alu -87 225 1 464 218 256 0 chr2 102654135 102654346 -148033508 - L1MEc LINE L1 -4218 2178 1914 2399 91 0 0 chr2 102654349 102654658 -148033196 - AluY SINE Alu -2 309 1 2084 137 13 0 chr2 102654661 102654960 -148032894 - AluSx SINE Alu -9 303 1 2239 109 0 16 chr2 102655068 102655372 -148032482 - AluSx SINE Alu -13 299 1 2033 127 7 13 chr2 102655478 102655777 -148032077 + AluSx SINE Alu 2 298 -14 2194 110 3 0 chr2 102655778 102656068 -148031786 + AluSx SINE Alu 2 292 -20 1605 226 26 23 chr2 102657181 102657570 -148030284 - MLT1B LTR MaLR 0 390 1 988 181 157 0 chr2 102657647 102657851 -148030003 - MER46A DNA MER2_type 0 236 1 1919 155 46 125 chr2 102657904 102658272 -148029582 + MER1A DNA MER1_type 1 539 0 2483 76 0 0 chr2 102658334 102658636 -148029218 + AluY SINE Alu 9 310 -1 438 228 24 121 chr2 102658748 102658954 -148028900 - MLT1H LTR MaLR 0 549 364 2465 77 3 0 chr2 102660139 102660437 -148027417 + AluSp SINE Alu 1 299 -14 313 300 8 42 chr2 102660511 102660631 -148027223 - MIR SINE MIR -144 118 3 181 85 0 64 chr2 102660726 102660773 -148027081 + (TGGGGG)n Simple_repeat Simple_repeat 5 48 0 207 69 0 0 chr2 102661166 102661195 -148026659 + (T)n Simple_repeat Simple_repeat 1 29 0 1264 173 28 28 chr2 102661365 102661613 -148026241 - AluJo SINE Alu -26 286 39 2027 147 0 0 chr2 102661617 102661910 -148025944 - AluSg SINE Alu -12 298 6 336 305 126 29 chr2 102662422 102662596 -148025258 + MIR SINE MIR 28 218 -44 2348 104 0 0 chr2 102662805 102663102 -148024752 - AluSx SINE Alu -14 298 2 2129 173 30 5 chr2 102663105 102663476 -148024378 + Tigger1 DNA MER2_type 47 426 -1992 1960 132 7 0 chr2 102663476 102663756 -148024098 + AluY SINE Alu 1 282 -29 276 200 308 25 chr2 102663964 102664084 -148023770 - MER5A DNA MER1_type 0 189 36 188 280 11 65 chr2 102664300 102664393 -148023461 - MIR3 SINE MIR -11 197 110 2205 80 3 11 chr2 102664965 102665252 -148022602 + AluSg SINE Alu 1 285 -25 1435 116 46 9 chr2 102665420 102665636 -148022218 - AluSg/x SINE Alu -15 295 72 268 252 29 39 chr2 102665667 102665770 -148022084 - MIR3 SINE MIR -8 200 99 2320 90 0 7 chr2 102666669 102666969 -148020885 - AluSg SINE Alu -12 298 1 184 245 20 0 chr2 102667325 102667374 -148020480 - MER5B DNA MER1_type -1 177 128 206 321 12 0 chr2 102667388 102667472 -148020382 - MER5B DNA MER1_type 0 178 94 1965 138 46 32 chr2 102668123 102668493 -148019361 - THE1C LTR MaLR 0 375 1 252 333 133 31 chr2 102669249 102669474 -148018380 - L3 LINE CR1 -323 1254 1007 214 270 0 16 chr2 102669584 102669647 -148018207 + MIR SINE MIR 86 147 -61 212 239 84 14 chr2 102669987 102670058 -148017796 + MER5B DNA MER1_type 97 172 -6 1395 183 114 19 chr2 102670062 102670379 -148017475 + MER7A DNA MER2_type 2 346 0 419 292 20 41 chr2 102670410 102670605 -148017249 + L1MC5 LINE L1 7723 7913 -48 213 119 0 0 chr2 102670621 102670663 -148017191 + (A)n Simple_repeat Simple_repeat 1 42 0 2418 148 76 2 chr2 102672022 102672415 -148015439 - MSTC LTR MaLR -2 426 5 2261 104 0 0 chr2 102672920 102673209 -148014645 + AluSx SINE Alu 1 289 -23 727 185 20 26 chr2 102673466 102673617 -148014237 - MER5A DNA MER1_type -32 157 8 2053 119 3 26 chr2 102673749 102674051 -148013803 - AluSx SINE Alu -16 296 2 257 0 30 0 chr2 102674303 102674336 -148013518 + (GA)n Simple_repeat Simple_repeat 2 35 0 * 270 0 0 0 chr2 102674335 102674365 -148013489 + (TG)n Simple_repeat Simple_repeat 2 31 0 494 243 72 26 chr2 102674598 102674750 -148013104 - MER112 DNA MER1_type -101 159 1 2230 90 10 0 chr2 102675999 102676287 -148011567 + AluY SINE Alu 1 291 -20 2201 123 3 0 chr2 102676474 102676782 -148011072 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 102676787 102676808 -148011046 + AT_rich Low_complexity Low_complexity 1 21 0 1703 174 31 3 chr2 102676843 102677136 -148010718 + AluJb SINE Alu 1 301 -11 23 33 0 0 chr2 102677466 102677496 -148010358 + AT_rich Low_complexity Low_complexity 1 30 0 2309 84 3 17 chr2 102677954 102678252 -148009602 - AluSc SINE Alu -15 294 1 302 261 11 23 chr2 102678747 102678835 -148009019 - MIR SINE MIR -85 123 37 274 274 118 10 chr2 102679184 102679286 -148008568 + MIR SINE MIR 18 130 -78 324 0 0 0 chr2 102682792 102682828 -148005026 + (TA)n Simple_repeat Simple_repeat 2 37 0 225 0 0 0 chr2 102682828 102682853 -148005001 + (T)n Simple_repeat Simple_repeat 1 25 0 217 297 27 0 chr2 102683335 102683409 -148004445 - MIR SINE MIR -140 122 47 301 276 62 28 chr2 102684174 102684319 -148003535 + MIR SINE MIR 60 209 -53 2836 3 0 3 chr2 102685517 102685819 -148002035 - AluYa5 SINE Alu -10 301 1 236 304 49 29 chr2 102686328 102686430 -148001424 - MIR SINE MIR -110 152 49 2680 43 0 3 chr2 102686530 102686833 -148001021 - AluY SINE Alu -9 302 1 573 205 55 8 chr2 102686958 102687085 -148000769 + Charlie1 DNA MER1_type 2629 2761 0 364 280 108 27 chr2 102687088 102687274 -148000580 + MIR SINE MIR 12 212 -50 23 54 0 0 chr2 102688346 102688383 -147999471 + AT_rich Low_complexity Low_complexity 1 37 0 2254 120 0 0 chr2 102689022 102689322 -147998532 - AluSx SINE Alu -12 300 1 857 206 118 24 chr2 102689513 102689809 -147998045 - MER33 DNA MER1_type 0 324 1 180 0 0 0 chr2 102690803 102690823 -147997031 + (A)n Simple_repeat Simple_repeat 1 20 0 315 0 0 0 chr2 102691337 102691372 -147996482 + (TG)n Simple_repeat Simple_repeat 2 36 0 1514 204 15 0 chr2 102691381 102691651 -147996203 - AluJo SINE Alu -38 274 1 21 0 0 0 chr2 102691654 102691675 -147996179 + AT_rich Low_complexity Low_complexity 1 21 0 2188 117 3 0 chr2 102692473 102692782 -147995072 - AluSx SINE Alu -2 310 1 1798 165 3 35 chr2 102693891 102694031 -147993823 + AluJb SINE Alu 1 144 -168 10762 25 1 1 chr2 102694031 102696039 -147991815 + L1PA2 LINE L1 4148 6155 0 1798 165 3 35 chr2 102696039 102696214 -147991640 + AluJb SINE Alu 144 306 -6 182 195 58 69 chr2 102696752 102696839 -147991015 + MIR SINE MIR 59 144 -118 196 316 95 11 chr2 102698033 102698128 -147989726 - MIR SINE MIR -114 148 46 570 254 18 55 chr2 102698380 102698597 -147989257 - MIR SINE MIR 0 262 54 2247 131 0 6 chr2 102699706 102700018 -147987836 - AluSx SINE Alu -2 310 1 2409 79 0 16 chr2 102701294 102701609 -147986245 - AluY SINE Alu -1 310 1 1717 177 6 38 chr2 102701914 102702231 -147985623 - AluJb SINE Alu -5 307 1 1789 127 79 16 chr2 102702932 102703102 -147984752 - MER44D DNA MER2_type -1886 605 447 2031 125 10 23 chr2 102703102 102703407 -147984447 + AluSx SINE Alu 1 301 -11 1789 127 79 16 chr2 102703407 102703551 -147984303 - MER44D DNA MER2_type -2044 447 1 1136 195 25 17 chr2 102703737 102703973 -147983881 - MER8 DNA MER2_type -1 238 1 2717 42 0 0 chr2 102704216 102704522 -147983332 + AluY SINE Alu 1 306 -5 772 50 0 109 chr2 102704837 102705038 -147982816 + (TCCCC)n Simple_repeat Simple_repeat 1 179 0 350 204 49 6 chr2 102705671 102705833 -147982021 + C-rich Low_complexity Low_complexity 4 172 0 1715 170 0 7 chr2 102705851 102706128 -147981726 - AluSx SINE Alu -32 280 6 22 0 0 30 chr2 102706182 102706196 -147981658 + AT_rich Low_complexity Low_complexity 1 14 -18 2310 108 0 0 chr2 102706196 102706492 -147981362 + AluSc SINE Alu 1 296 -13 22 0 0 30 chr2 102706492 102706510 -147981344 + AT_rich Low_complexity Low_complexity 14 32 0 282 116 0 0 chr2 102706510 102706553 -147981301 + (TG)n Simple_repeat Simple_repeat 2 44 0 2263 86 3 0 chr2 102706709 102706999 -147980855 + AluSp SINE Alu 1 291 -22 22 35 0 0 chr2 102707291 102707320 -147980534 + AT_rich Low_complexity Low_complexity 1 29 0 2174 110 13 16 chr2 102707535 102707844 -147980010 - AluSq SINE Alu -5 308 1 233 262 65 28 chr2 102707988 102708095 -147979759 + MIR SINE MIR 78 188 -74 257 261 27 36 chr2 102711057 102711168 -147976686 + L1MC4a LINE L1 7425 7519 -289 1619 141 21 0 chr2 102711360 102711601 -147976253 - AluJb SINE Alu -55 257 12 315 281 70 55 chr2 102711608 102711807 -147976047 + L1MC4 LINE L1 7841 8042 0 26 0 0 0 chr2 102711945 102711971 -147975883 + AT_rich Low_complexity Low_complexity 1 26 0 2655 111 3 0 chr2 102712771 102713131 -147974723 - MER51A LTR ERV1 0 634 274 2401 91 7 0 chr2 102715571 102715869 -147971985 - AluSx SINE Alu -12 300 1 2144 84 0 87 chr2 102716228 102716561 -147971293 - AluSq SINE Alu -5 308 5 7053 95 37 7 chr2 102719443 102720605 -147967249 - L1MA2 LINE L1 -7 6297 5101 356 226 76 52 chr2 102720640 102720799 -147967055 - L1MD2 LINE L1 -2 6164 6009 180 0 0 0 chr2 102721023 102721043 -147966811 + (T)n Simple_repeat Simple_repeat 1 20 0 271 169 31 0 chr2 102721533 102721598 -147966256 - L2 LINE L2 -2 3270 3204 317 248 32 16 chr2 102721690 102721815 -147966039 - MER94 DNA DNA -2 132 6 276 254 69 20 chr2 102722111 102722210 -147965644 - MER5A DNA MER1_type -26 163 45 356 269 48 28 chr2 102722350 102722495 -147965359 - Charlie8 DNA MER1_type -2141 276 129 26 0 0 0 chr2 102722905 102722931 -147964923 + AT_rich Low_complexity Low_complexity 1 26 0 273 285 64 112 chr2 102723511 102723806 -147964048 + L2 LINE L2 2996 3276 -37 193 200 89 0 chr2 102723861 102723906 -147963948 - MIR SINE MIR -95 113 65 394 283 7 29 chr2 102724857 102724995 -147962859 + MIR SINE MIR 13 147 -115 1785 179 83 24 chr2 102727350 102727724 -147960130 - MSTD LTR MaLR 0 396 1 346 269 77 39 chr2 102729442 102729572 -147958282 - MER5A DNA MER1_type -1 188 54 393 22 0 0 chr2 102730252 102730298 -147957556 + (TG)n Simple_repeat Simple_repeat 2 47 0 364 225 139 23 chr2 102730837 102730966 -147956888 + MIR SINE MIR 69 212 -50 452 62 16 0 chr2 102731649 102731713 -147956141 + (TC)n Simple_repeat Simple_repeat 2 66 0 2239 113 3 3 chr2 102731719 102732029 -147955825 - AluSx SINE Alu -2 310 1 2360 97 0 0 chr2 102733709 102734008 -147953846 - AluSx SINE Alu -13 299 1 404 267 146 12 chr2 102735274 102735439 -147952415 - MIR SINE MIR -18 244 58 23 54 0 0 chr2 102737325 102737362 -147950492 + AT_rich Low_complexity Low_complexity 1 37 0 354 45 0 0 chr2 102738489 102738533 -147949321 + (TCC)n Simple_repeat Simple_repeat 1 44 0 2047 141 7 0 chr2 102738533 102738838 -147949016 - AluSx SINE Alu -5 307 1 227 302 0 0 chr2 102738852 102738915 -147948939 - L1ME4a LINE L1 -110 6011 5949 180 0 0 0 chr2 102739473 102739493 -147948361 + (T)n Simple_repeat Simple_repeat 1 20 0 434 183 130 26 chr2 102740097 102740212 -147947642 - L1MD2 LINE L1 -16 6343 6217 498 244 88 76 chr2 102740602 102741658 -147946196 - L1MC5 LINE L1 -367 7594 6698 598 227 172 12 chr2 102742116 102742279 -147945575 + MER5A DNA MER1_type 1 189 0 300 325 42 25 chr2 102742305 102742425 -147945429 - MIR3 SINE MIR -52 156 35 27 0 0 0 chr2 102743560 102743587 -147944267 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr2 102743643 102743671 -147944183 + AT_rich Low_complexity Low_complexity 1 28 0 457 152 94 129 chr2 102743725 102743785 -147944069 - MER106B DNA MER1_type 0 1059 998 1469 150 27 93 chr2 102743785 102744118 -147943736 - AluJo SINE Alu -1 311 1 457 152 94 129 chr2 102744118 102744228 -147943626 - MER106B DNA MER1_type -61 998 895 203 286 18 18 chr2 102744416 102744472 -147943382 - MIR SINE MIR -68 140 85 349 226 142 0 chr2 102745110 102745216 -147942638 + MIR SINE MIR 119 239 -23 1657 170 6 22 chr2 102745491 102745808 -147942046 - AluJb SINE Alu 0 312 1 22 0 0 0 chr2 102746024 102746046 -147941808 + AT_rich Low_complexity Low_complexity 1 22 0 1549 168 125 0 chr2 102746046 102746302 -147941552 - AluJo SINE Alu -14 288 1 242 255 0 0 chr2 102746304 102746351 -147941503 - MARNA DNA Mariner -403 183 137 2254 216 93 8 chr2 102747128 102747624 -147940230 - MER68 LTR ERV1 0 562 25 804 276 35 35 chr2 102747634 102747920 -147939934 + L2 LINE L2 2254 2539 -775 745 270 128 58 chr2 102748063 102748697 -147939157 + L2 LINE L2 2531 3233 -80 2302 96 0 0 chr2 102748697 102748990 -147938864 - AluSq SINE Alu -20 293 1 745 270 128 58 chr2 102748990 102749072 -147938782 + L2 LINE L2 3233 3308 -5 444 105 0 0 chr2 102749150 102749226 -147938628 + (TG)n Simple_repeat Simple_repeat 1 76 0 2152 105 24 0 chr2 102750704 102751000 -147936854 + AluSg SINE Alu 1 303 -7 1546 218 46 19 chr2 102751009 102751381 -147936473 - L1ME3A LINE L1 0 6170 5789 2290 92 0 13 chr2 102752279 102752582 -147935272 - AluSg SINE Alu -11 299 1 1613 159 9 71 chr2 102752943 102753269 -147934585 - AluJo SINE Alu -4 308 3 2035 139 43 130 chr2 102753460 102753929 -147933925 - MSTA LTR MaLR 0 428 1 228 209 0 0 chr2 102754481 102754524 -147933330 + L1MB7 LINE L1 6132 6174 -10 265 305 0 47 chr2 102754602 102754730 -147933124 - L1ME4a LINE L1 -58 6063 5942 25 95 0 0 chr2 102756234 102756308 -147931546 + AT_rich Low_complexity Low_complexity 1 74 0 2384 73 3 3 chr2 102756996 102757299 -147930555 + AluSc SINE Alu 1 303 -6 2163 66 36 7 chr2 102758750 102759044 -147928810 + AluY SINE Alu 1 302 0 23 33 0 0 chr2 102761092 102761122 -147926732 + AT_rich Low_complexity Low_complexity 1 30 0 2281 246 96 18 chr2 102761372 102762210 -147925644 - L1MEc LINE L1 -5479 917 15 21 36 0 0 chr2 102763957 102763985 -147923869 + AT_rich Low_complexity Low_complexity 1 28 0 5602 136 145 28 chr2 102767193 102768294 -147919560 - Tigger3b DNA MER2_type -1 1230 1 395 167 99 0 chr2 102769483 102769582 -147918272 - MIR SINE MIR -67 141 42 22 80 0 0 chr2 102772121 102772171 -147915683 + AT_rich Low_complexity Low_complexity 1 50 0 21 36 0 0 chr2 102772254 102772282 -147915572 + AT_rich Low_complexity Low_complexity 1 28 0 323 279 122 69 chr2 102772533 102772780 -147915074 + MIR SINE MIR 2 261 -1 645 326 78 19 chr2 102775660 102775979 -147911875 + L2 LINE L2 2632 2969 -345 285 274 134 43 chr2 102776039 102776225 -147911629 + L2 LINE L2 3097 3299 -14 302 275 90 78 chr2 102778634 102778801 -147909053 - L1MC4 LINE L1 -380 7662 7494 2568 60 0 0 chr2 102779243 102779544 -147908310 + AluY SINE Alu 1 301 -10 256 323 0 43 chr2 102779565 102779658 -147908196 - L2 LINE L2 -38 3275 3187 425 135 9 36 chr2 102780050 102780161 -147907693 + CT-rich Low_complexity Low_complexity 2 109 0 290 128 0 0 chr2 102780956 102781003 -147906851 + L2 LINE L2 3266 3312 -1 330 273 27 27 chr2 102781402 102781512 -147906342 - MIR SINE MIR -22 240 131 2281 84 0 13 chr2 102782206 102782516 -147905338 + AluSp SINE Alu 1 306 -7 23 0 0 0 chr2 102782579 102782602 -147905252 + AT_rich Low_complexity Low_complexity 1 23 0 262 266 193 18 chr2 102784087 102784196 -147903658 - MER5B DNA MER1_type -28 150 23 205 312 108 86 chr2 102784767 102785036 -147902818 - L2 LINE L2 -2 3270 2996 2122 131 0 10 chr2 102787366 102787671 -147900183 - AluSg SINE Alu -8 302 1 770 92 84 0 chr2 102790696 102790862 -147896992 + L1PA10 LINE L1 6006 6182 0 620 219 121 14 chr2 102790862 102791077 -147896777 + MLT1C LTR MaLR 184 421 -46 27 0 0 0 chr2 102791077 102791104 -147896750 + AT_rich Low_complexity Low_complexity 1 27 0 2061 130 34 0 chr2 102791294 102791617 -147896237 - MER7A DNA MER2_type 0 346 15 1307 177 108 22 chr2 102792806 102792931 -147894923 + MER2 DNA MER2_type 2 115 -230 6222 131 85 22 chr2 102792931 102794088 -147893766 + Tigger3b DNA MER2_type 2 1231 0 1307 177 108 22 chr2 102794088 102794278 -147893576 + MER2 DNA MER2_type 115 344 -1 1830 148 0 20 chr2 102795035 102795333 -147892521 - AluJb SINE Alu -20 292 1 279 322 127 17 chr2 102795359 102795651 -147892203 - L3 LINE CR1 -609 968 645 730 173 8 30 chr2 102795654 102795787 -147892067 + FLAM_C SINE Alu 3 132 -1 288 0 0 0 chr2 102797629 102797661 -147890193 + (T)n Simple_repeat Simple_repeat 1 32 0 969 253 126 104 chr2 102798781 102799622 -147888232 + HAL1 LINE L1 532 1410 -1097 195 42 0 0 chr2 102799622 102799646 -147888208 + (CATA)n Simple_repeat Simple_repeat 4 27 0 969 253 126 104 chr2 102799646 102800009 -147887845 + HAL1 LINE L1 1410 1763 -744 250 293 38 25 chr2 102800049 102800206 -147887648 + HAL1 LINE L1 1906 2064 -443 791 207 35 6 chr2 102800770 102800944 -147886910 - MER3 DNA MER1_type -15 194 16 610 228 67 76 chr2 102801131 102801355 -147886499 + MIR SINE MIR 14 235 -27 201 210 0 113 chr2 102801325 102801387 -147886467 + L2 LINE L2 3210 3264 -8 * 211 259 0 47 chr2 102801454 102801539 -147886315 + CT-rich Low_complexity Low_complexity 3 83 0 276 239 12 46 chr2 102801885 102802043 -147885811 + GA-rich Low_complexity Low_complexity 5 246 0 202 255 0 20 chr2 102802119 102802170 -147885684 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 21 57 0 0 chr2 102802379 102802414 -147885440 + AT_rich Low_complexity Low_complexity 1 35 0 217 336 64 9 chr2 102804024 102804134 -147883720 - MIR SINE MIR -63 145 30 346 331 8 25 chr2 102805838 102805959 -147881895 - MIR3 SINE MIR -18 190 72 2129 119 3 22 chr2 102807861 102808173 -147879681 + AluSx SINE Alu 5 310 -2 27 29 0 0 chr2 102810000 102810034 -147877820 + AT_rich Low_complexity Low_complexity 1 34 0 639 198 47 66 chr2 102811390 102811602 -147876252 - MER3 DNA MER1_type 0 209 2 292 224 60 51 chr2 102812660 102812798 -147875056 - MIR SINE MIR -18 244 23 29 90 0 0 chr2 102814935 102815013 -147872841 + AT_rich Low_complexity Low_complexity 1 78 0 210 128 0 0 chr2 102817491 102817530 -147870324 + (TCC)n Simple_repeat Simple_repeat 1 39 0 538 75 0 96 chr2 102820407 102820501 -147867353 - L1PB4 LINE L1 -34 6122 6038 1436 73 0 0 chr2 102823381 102823558 -147864296 - AluSc SINE Alu -12 297 121 2286 92 0 0 chr2 102823642 102823953 -147863901 - AluY SINE Alu 0 311 1 1122 159 0 0 chr2 102824954 102825124 -147862730 + AluJb SINE Alu 138 307 -5 378 226 190 9 chr2 102825222 102825443 -147862411 - L1ME4a LINE L1 -11 6110 5850 506 236 102 37 chr2 102825475 102825721 -147862133 - L1ME3A LINE L1 -12 6158 5897 4391 210 47 52 chr2 102825773 102826416 -147861438 - L1ME3A LINE L1 -753 5393 4748 2211 119 0 0 chr2 102826416 102826709 -147861145 - AluSg SINE Alu -15 295 3 4391 210 47 52 chr2 102826709 102827734 -147860120 - L1ME3A LINE L1 -1398 4748 3849 963 244 135 30 chr2 102827751 102828284 -147859570 - L1ME4a LINE L1 -323 5847 5259 21 0 0 0 chr2 102828429 102828450 -147859404 + AT_rich Low_complexity Low_complexity 1 21 0 1293 92 0 6 chr2 102829242 102829405 -147858449 - AluSq SINE Alu -19 294 133 649 241 39 25 chr2 102830076 102830279 -147857575 - MER3 DNA MER1_type -3 206 1 248 195 0 78 chr2 102830973 102831050 -147856804 + L3 LINE CR1 660 730 -847 2381 49 56 0 chr2 102832664 102832949 -147854905 + AluY SINE Alu 1 301 -10 34 55 0 0 chr2 102834578 102834633 -147853221 + AT_rich Low_complexity Low_complexity 1 55 0 2087 122 0 3 chr2 102836356 102836659 -147851195 - AluSg1 SINE Alu -7 302 1 1729 119 130 0 chr2 102836659 102836928 -147850926 - AluSg SINE Alu -6 304 1 384 77 0 0 chr2 102837892 102837944 -147849910 + (A)n Simple_repeat Simple_repeat 1 52 0 192 111 0 0 chr2 102841497 102841533 -147846321 + (A)n Simple_repeat Simple_repeat 1 36 0 1329 204 21 40 chr2 102842438 102842815 -147845039 - L1MB8 LINE L1 0 6178 5809 1758 168 110 0 chr2 102844331 102844659 -147843195 - THE1B LTR MaLR 0 364 1 23 0 0 0 chr2 102845103 102845126 -147842728 + AT_rich Low_complexity Low_complexity 1 23 0 481 191 112 37 chr2 102845495 102845683 -147842171 - MER33 DNA MER1_type -97 227 26 231 318 122 34 chr2 102845697 102845845 -147842009 - MIR SINE MIR -54 208 48 234 286 57 14 chr2 102847093 102847163 -147840691 - L2 LINE L2 -1 3271 3199 815 191 36 6 chr2 102847349 102847517 -147840337 - MER5A DNA MER1_type -3 186 14 1652 172 36 33 chr2 102847992 102848381 -147839473 + MLT1B LTR MaLR 1 390 0 676 230 125 17 chr2 102848851 102849203 -147838651 - L1MC5 LINE L1 -49 7912 7523 822 226 39 53 chr2 102849228 102849511 -147838343 - L1MC5 LINE L1 -1050 6911 6633 1901 144 3 10 chr2 102849512 102849882 -147837972 - AluJb SINE Alu 0 368 1 229 281 205 23 chr2 102850239 102850541 -147837313 - L1MC4a LINE L1 -1639 6169 5813 302 232 40 40 chr2 102850552 102850651 -147837203 - L1MB8 LINE L1 -16 6162 6064 1215 229 125 12 chr2 102850726 102851127 -147836727 - L1MC4a LINE L1 -1997 5811 5366 4025 98 23 27 chr2 102851427 102851851 -147836003 + MER51C LTR ERV1 1 425 -215 2524 110 8 24 chr2 102851851 102852232 -147835622 - THE1C LTR MaLR 0 375 1 10435 115 28 12 chr2 102852232 102853787 -147834067 - THE1C-int LTR MaLR 0 1580 1 2518 79 71 8 chr2 102853787 102854140 -147833714 - THE1C LTR MaLR 0 375 1 4025 98 23 27 chr2 102854140 102854373 -147833481 + MER51C LTR ERV1 422 640 0 548 315 76 40 chr2 102854393 102854866 -147832988 - L1MC4a LINE L1 -913 5233 4744 25 0 0 0 chr2 102854985 102855010 -147832844 + AT_rich Low_complexity Low_complexity 1 25 0 414 238 25 0 chr2 102855054 102855176 -147832678 - L1MB7 LINE L1 -5 6161 6045 1141 244 36 23 chr2 102855732 102856117 -147831737 - HAL1 LINE L1 -590 1917 1528 338 320 50 28 chr2 102856357 102856538 -147831316 - HAL1 LINE L1 -1265 1242 1058 228 274 97 9 chr2 102857302 102857415 -147830439 + L1MDa LINE L1 790 912 -5484 308 264 11 11 chr2 102857434 102857521 -147830333 + L1MDa LINE L1 921 1007 -5198 1829 114 72 4 chr2 102857538 102857850 -147830004 + AluSg1 SINE Alu 1 330 0 4576 159 27 18 chr2 102857868 102858819 -147829035 + L1MB2 LINE L1 5194 6153 -18 441 263 45 87 chr2 102858819 102859200 -147828654 + L1MDa LINE L1 1002 1402 -4849 2426 166 44 42 chr2 102859210 102859758 -147828096 - L1MC2 LINE L1 -363 5981 5433 1165 290 34 5 chr2 102859752 102860197 -147827657 - L1M4 LINE L1 -1755 4391 3934 * 1048 221 64 65 chr2 102860196 102860730 -147827124 + L1MDa LINE L1 3049 3581 -2634 * 309 229 24 36 chr2 102860730 102860813 -147827041 + L1MD2 LINE L1 2343 2424 -4116 324 213 58 58 chr2 102860896 102861057 -147826797 + L1MD2 LINE L1 2419 2582 -3958 1874 124 4 0 chr2 102861057 102861316 -147826538 + AluSq SINE Alu 1 260 -53 324 213 58 58 chr2 102861316 102861328 -147826526 + L1MD2 LINE L1 2581 2592 -3948 379 111 32 0 chr2 102861394 102861457 -147826397 + Tigger2 DNA MER2_type 1 65 -2653 * 2395 134 48 14 chr2 102861448 102861882 -147825972 + Tigger2 DNA MER2_type 2270 2718 0 2967 247 28 39 chr2 102861896 102863176 -147824678 + L1MD2 LINE L1 2629 3894 -2646 * 3700 214 60 27 chr2 102863174 102865196 -147822658 + L1MD2 LINE L1 4666 6751 -2 1369 254 118 11 chr2 102865191 102865911 -147821943 + L1MDa LINE L1 4385 5181 -1034 * 1902 142 3 16 chr2 102866764 102867073 -147820781 - AluSx SINE Alu -5 307 3 1652 183 0 10 chr2 102867854 102868144 -147819710 + AluJo SINE Alu 5 291 -21 751 151 0 16 chr2 102868150 102868276 -147819578 + FLAM_C SINE Alu 1 124 -19 265 236 97 30 chr2 102869416 102869581 -147818273 + L1ME4a LINE L1 5946 6121 0 895 158 154 5 chr2 102869620 102869933 -147817921 + MSTA LTR MaLR 1 428 0 8910 146 35 12 chr2 102869934 102871540 -147816314 + MSTA-int LTR MaLR 2 1645 -6 2203 134 123 8 chr2 102871545 102871926 -147815928 + MSTA LTR MaLR 1 425 -3 1784 138 82 23 chr2 102872189 102872543 -147815311 + THE1C LTR MaLR 1 375 0 9225 143 24 36 chr2 102872545 102874143 -147813711 + THE1C-int LTR MaLR 3 1580 0 1725 153 91 26 chr2 102874143 102874495 -147813359 + THE1C LTR MaLR 1 375 0 402 294 245 38 chr2 102875732 102876075 -147811779 - L3 LINE CR1 -725 852 439 488 123 12 0 chr2 102876423 102876504 -147811350 - L1PA15 LINE L1 0 6165 6084 272 306 107 44 chr2 102876528 102876890 -147810964 - L1MDb LINE L1 -2396 4144 3806 1899 146 23 0 chr2 102876890 102877192 -147810662 - AluSx SINE Alu -3 309 1 272 306 107 44 chr2 102877192 102877473 -147810381 - L1MDb LINE L1 -2734 3806 3449 1708 199 77 25 chr2 102877473 102877915 -147809939 + MLT1C LTR MaLR 1 465 -2 272 306 107 44 chr2 102877915 102877992 -147809862 - L1MDb LINE L1 -3091 3449 3378 435 296 103 31 chr2 102878008 102878299 -147809555 - L1MDb LINE L1 -3188 3352 3041 21 0 0 0 chr2 102878413 102878434 -147809420 + AT_rich Low_complexity Low_complexity 1 21 0 258 191 0 0 chr2 102878434 102878497 -147809357 - L1MD1 LINE L1 -1 6241 6179 3032 258 62 72 chr2 102878504 102879931 -147807923 + L1M4 LINE L1 2 1413 -5129 830 146 8 0 chr2 102879937 102880047 -147807807 + AluJo SINE Alu 7 120 -192 183 42 0 0 chr2 102880047 102880071 -147807783 + (TAA)n Simple_repeat Simple_repeat 1 24 0 830 146 8 0 chr2 102880071 102880090 -147807764 + AluJo SINE Alu 120 137 -175 2189 240 47 12 chr2 102880090 102880669 -147807185 + L1M4 LINE L1 1390 1988 -4658 2373 228 9 15 chr2 102880671 102881254 -147806600 + L1 LINE L1 3579 4157 -1989 29622 113 17 70 chr2 102881295 102886524 -147801330 + L1P LINE L1 12 4965 -1181 962 103 0 0 chr2 102886526 102886652 -147801202 - THE1A LTR MaLR -229 126 1 1329 271 89 26 chr2 102886662 102887157 -147800697 - L1MDb LINE L1 -5241 1302 777 946 235 36 71 chr2 102887456 102887792 -147800062 - L1MDb LINE L1 -6196 344 21 1349 235 45 31 chr2 102887839 102888226 -147799628 - L1ME3A LINE L1 -9 6161 5766 2217 86 0 3 chr2 102888226 102888528 -147799326 - AluY SINE Alu -10 301 1 1349 235 45 31 chr2 102888528 102888562 -147799292 - L1ME3A LINE L1 -404 5766 5734 2273 234 16 14 chr2 102888647 102889147 -147798707 + MLT1D LTR MaLR 3 503 -2 1041 238 29 4 chr2 102889255 102889495 -147798359 - MER77 LTR ERV1 0 605 360 2231 102 0 0 chr2 102889727 102890030 -147797824 - AluSx SINE Alu -9 303 1 342 287 66 48 chr2 102890564 102890731 -147797123 - HAL1 LINE L1 -1180 1327 1158 673 242 0 43 chr2 102890946 102891107 -147796747 + MIR SINE MIR 3 156 -106 647 306 145 20 chr2 102891117 102891345 -147796509 + L2 LINE L2 818 1016 -2298 2186 89 7 0 chr2 102891345 102891638 -147796216 - AluY SINE Alu -16 295 1 647 306 145 20 chr2 102891638 102891864 -147795990 + L2 LINE L2 1016 1329 -1985 804 189 7 7 chr2 102891988 102892263 -147795591 + MLT1A1 LTR MaLR 1 365 0 2265 143 19 11 chr2 102893923 102894295 -147793559 - THE1C LTR MaLR 0 375 1 918 207 47 5 chr2 102895225 102895418 -147792436 - MIR SINE MIR -28 234 34 302 284 49 20 chr2 102895494 102895596 -147792258 + L1MB8 LINE L1 4946 5050 -1096 286 177 61 61 chr2 102895796 102895943 -147791911 + L1MB8 LINE L1 5282 5428 -2380 711 246 49 38 chr2 102896052 102896316 -147791538 + L1PB4 LINE L1 5700 5966 -190 * 2657 155 32 50 chr2 102896083 102896422 -147791432 + L1MA8 LINE L1 5725 6069 -222 1918 132 0 0 chr2 102896422 102896702 -147791152 - AluSx SINE Alu -32 280 1 2657 155 32 50 chr2 102896702 102896770 -147791084 + L1MA8 LINE L1 6069 6137 -154 1747 84 4 0 chr2 102896770 102897007 -147790847 + AluSg/x SINE Alu 72 309 -3 2657 155 32 50 chr2 102897007 102897152 -147790702 + L1MA8 LINE L1 6137 6268 -23 312 300 120 20 chr2 102897180 102897380 -147790474 + L1MB8 LINE L1 5600 5819 -302 2077 230 96 12 chr2 102897431 102898004 -147789850 - L1MC4 LINE L1 0 8042 7422 2734 144 13 55 chr2 102898015 102898556 -147789298 - L1MB8 LINE L1 -63 6115 5598 1437 204 76 40 chr2 102898561 102898957 -147788897 - MLT2D LTR ERVL 0 414 5 444 103 0 39 chr2 102898959 102899037 -147788817 + Alu SINE Alu 237 311 0 190 315 0 0 chr2 102899738 102899792 -147788062 + L3 LINE CR1 1523 1576 -1 314 216 21 41 chr2 102900437 102900534 -147787320 + L1MB8 LINE L1 5963 6057 -121 302 278 43 9 chr2 102900669 102900784 -147787070 - HAL1 LINE L1 -394 2113 1995 632 321 85 16 chr2 102900939 102901185 -147786669 + MER115 DNA AcHobo 15 277 -416 409 287 30 48 chr2 102901257 102901411 -147786443 + MER115 DNA AcHobo 290 440 -253 315 128 0 0 chr2 102901411 102901458 -147786396 - MLT2C2 LTR ERVL -1 463 417 609 172 0 0 chr2 102901458 102901580 -147786274 + (TCTCTG)n Simple_repeat Simple_repeat 4 125 0 390 20 20 0 chr2 102901580 102901630 -147786224 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 2303 160 85 11 chr2 102901630 102902067 -147785787 - MLT2B1 LTR ERVL -51 469 1 969 217 72 13 chr2 102902067 102902302 -147785552 + MER115 DNA AcHobo 443 691 -2 1124 199 205 12 chr2 102902374 102902711 -147785143 - MLT1H LTR MaLR -2 547 146 362 162 29 0 chr2 102902711 102902779 -147785075 + L1MB7 LINE L1 6062 6131 -53 769 214 25 0 chr2 102902785 102902944 -147784910 + L1MC4 LINE L1 7422 7584 -458 261 291 35 0 chr2 102903256 102903342 -147784512 - HAL1 LINE L1 -756 1751 1663 1328 259 80 60 chr2 102903347 102903833 -147784021 + MER77 LTR ERV1 127 598 -7 401 264 57 114 chr2 102903967 102904247 -147783607 - HAL1 LINE L1 -1503 1004 741 209 300 14 129 chr2 102904691 102904901 -147782953 - L2 LINE L2 0 3313 3128 234 303 56 34 chr2 102906331 102906420 -147781434 - MIR3 SINE MIR -30 178 88 2038 103 13 17 chr2 102906536 102906837 -147781017 + AluSx SINE Alu 1 300 -12 336 316 44 13 chr2 102907591 102907749 -147780105 + MIR SINE MIR 63 225 -37 357 225 0 0 chr2 102908487 102908576 -147779278 + (TG)n Simple_repeat Simple_repeat 1 89 0 3748 145 55 7 chr2 102909591 102910265 -147777589 - MER67C LTR ERV1 -4 706 1 372 22 0 0 chr2 102911076 102911121 -147776733 + (GA)n Simple_repeat Simple_repeat 2 46 0 461 238 70 41 chr2 102911177 102911349 -147776505 + MER5A DNA MER1_type 7 183 -6 2003 117 0 0 chr2 102911683 102911999 -147775855 + AluSx SINE Alu 1 316 0 398 302 36 54 chr2 102912478 102912700 -147775154 - MIR SINE MIR 0 262 45 1325 187 29 0 chr2 102914172 102914413 -147773441 - MER89 LTR ERV1 0 559 312 2605 142 31 5 chr2 102914416 102914831 -147773023 - MSTB LTR MaLR 0 426 1 8637 188 35 5 chr2 102914842 102916429 -147771425 - MSTB-int LTR MaLR -14 1637 3 2848 124 19 5 chr2 102916431 102916851 -147771003 - MSTB LTR MaLR 0 426 1 982 189 108 71 chr2 102916856 102917153 -147770701 - MER89 LTR ERV1 -251 308 1 992 222 101 36 chr2 102917272 102917659 -147770195 + LTR37A LTR ERV1 14 425 -1 360 0 0 0 chr2 102917659 102917699 -147770155 + (TG)n Simple_repeat Simple_repeat 2 41 0 4518 76 3 5 chr2 102918035 102918617 -147769237 - LTR10C LTR ERV1 0 591 11 627 151 28 0 chr2 102919399 102919505 -147768349 + MER89 LTR ERV1 1 109 -450 2483 189 16 8 chr2 102919567 102919835 -147768019 + MER89 LTR ERV1 69 344 -215 3630 137 45 35 chr2 102919835 102920472 -147767382 - LTR48B LTR ERV1 0 644 1 2483 189 16 8 chr2 102920472 102920690 -147767164 + MER89 LTR ERV1 344 559 0 2025 217 74 39 chr2 102921146 102921284 -147766570 - L1MC4 LINE L1 -3 8039 7907 305 47 23 0 chr2 102921284 102921327 -147766527 + (TG)n Simple_repeat Simple_repeat 2 45 0 2025 217 74 39 chr2 102921327 102921400 -147766454 - L1MC4 LINE L1 -135 7907 7838 2058 145 15 15 chr2 102921400 102921737 -147766117 + MER1B DNA MER1_type 1 337 0 2025 217 74 39 chr2 102921737 102922119 -147765735 - L1MC4 LINE L1 -204 7838 7424 243 214 18 18 chr2 102923003 102923059 -147764795 + MER5B DNA MER1_type 7 62 -116 1943 129 24 3 chr2 102923062 102923395 -147764459 + L1PB4 LINE L1 5342 5681 -475 786 161 8 0 chr2 102923396 102923520 -147764334 + FLAM_C SINE Alu 2 126 -17 2671 131 25 51 chr2 102923524 102923624 -147764230 + L1PB4 LINE L1 5675 5776 -380 432 0 0 0 chr2 102923624 102923672 -147764182 + (TA)n Simple_repeat Simple_repeat 2 49 0 2671 131 25 51 chr2 102923672 102924059 -147763795 + L1PB4 LINE L1 5776 6149 -7 425 214 60 34 chr2 102924062 102924179 -147763675 - MER5B DNA MER1_type -58 120 1 344 248 105 106 chr2 102925708 102925928 -147761926 + MIR SINE MIR 1 218 -44 471 224 182 12 chr2 102926663 102926828 -147761026 - MIR SINE MIR -8 254 62 487 285 70 49 chr2 102927524 102927558 -147760296 + MIR SINE MIR 41 73 -189 1770 216 25 56 chr2 102927558 102928040 -147759814 - MLT1C LTR MaLR 0 467 1 487 285 70 49 chr2 102928040 102928211 -147759643 + MIR SINE MIR 73 253 -9 192 309 64 45 chr2 102928239 102928349 -147759505 - MIR SINE MIR -117 145 34 1538 176 24 54 chr2 102929194 102929564 -147758290 + MLT1A1 LTR MaLR 1 359 -6 184 315 0 19 chr2 102930162 102930216 -147757638 + L2 LINE L2 3245 3297 -16 225 65 0 0 chr2 102930221 102930252 -147757602 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 244 224 284 37 chr2 102930529 102930663 -147757191 - MER5B DNA MER1_type -8 170 4 407 277 36 0 chr2 102930670 102930782 -147757072 - MER5A DNA MER1_type -1 188 73 1377 227 178 11 chr2 102931516 102931983 -147755871 - MER74A LTR ERVL -13 545 1 1660 164 3 23 chr2 102932784 102933094 -147754760 + AluJo SINE Alu 2 305 -7 206 222 0 0 chr2 102933484 102933529 -147754325 + (CA)n Simple_repeat Simple_repeat 2 46 0 225 153 136 0 chr2 102934770 102934829 -147753025 + LTR2 LTR ERV1 14 80 -369 404 123 0 46 chr2 102935000 102935065 -147752789 + MLT1D LTR MaLR 29 90 -415 1421 143 38 34 chr2 102935122 102935388 -147752466 - AluJo SINE Alu -17 295 29 270 284 21 21 chr2 102936638 102936733 -147751121 + MIR3 SINE MIR 113 207 -1 785 171 6 0 chr2 102937951 102938126 -147749728 + GA-rich Low_complexity Low_complexity 1 176 0 678 174 0 0 chr2 102938163 102938436 -147749418 + GA-rich Low_complexity Low_complexity 1 273 0 259 203 72 19 chr2 102938441 102938648 -147749206 + Harlequin LTR ERV1 867 1084 -5812 342 228 20 40 chr2 102938801 102938902 -147748952 + MIR3 SINE MIR 82 180 -28 203 270 209 43 chr2 102939362 102939477 -147748377 - MIR3 SINE MIR -72 136 3 357 189 0 0 chr2 102939485 102939580 -147748274 + CT-rich Low_complexity Low_complexity 2 96 0 885 135 112 24 chr2 102940363 102940533 -147747321 - MER5A DNA MER1_type 0 189 5 241 164 0 0 chr2 102940693 102940742 -147747112 - MER5A DNA MER1_type -135 54 6 1828 190 95 109 chr2 102940867 102941530 -147746324 + MLT1E1 LTR MaLR 1 654 0 320 243 27 72 chr2 102941589 102941700 -147746154 - MLT1I LTR MaLR -51 358 253 180 0 0 0 chr2 102942390 102942410 -147745444 + (T)n Simple_repeat Simple_repeat 1 20 0 184 143 0 41 chr2 102942606 102942655 -147745199 + (TA)n Simple_repeat Simple_repeat 1 47 0 2274 215 31 39 chr2 102944351 102944950 -147742904 - MLT1H1 LTR MaLR -2 553 2 609 272 15 67 chr2 102945484 102945679 -147742175 - MIR3 SINE MIR -6 202 18 197 279 49 0 chr2 102946025 102946086 -147741768 + MIR SINE MIR 77 140 -122 362 314 114 14 chr2 102946091 102946311 -147741543 - MIR SINE MIR -1 261 20 229 299 175 34 chr2 102946336 102946604 -147741250 + L3 LINE CR1 1270 1575 -2 309 310 63 37 chr2 102946606 102946755 -147741099 + MIR SINE MIR 15 156 -52 247 225 84 0 chr2 102948108 102948179 -147739675 + L1MC4 LINE L1 7836 7912 -130 425 189 0 4 chr2 102948197 102948425 -147739429 + (TCTCTG)n Simple_repeat Simple_repeat 1 226 0 429 283 6 0 chr2 102948450 102948627 -147739227 + (TATATG)n Simple_repeat Simple_repeat 1 178 0 300 289 72 0 chr2 102948635 102948718 -147739136 - L1MC4 LINE L1 -1340 6702 6614 465 192 0 0 chr2 102948721 102948942 -147738912 + (TCTCTG)n Simple_repeat Simple_repeat 1 221 0 642 166 0 0 chr2 102948957 102949132 -147738722 + (TCTCTG)n Simple_repeat Simple_repeat 4 178 0 545 212 5 20 chr2 102949143 102949552 -147738302 + (TCTCTG)n Simple_repeat Simple_repeat 1 402 0 283 186 0 29 chr2 102949605 102949777 -147738077 + (TCTCTG)n Simple_repeat Simple_repeat 4 170 0 375 206 0 0 chr2 102949790 102949955 -147737899 + (TCTCTG)n Simple_repeat Simple_repeat 6 170 0 342 228 24 24 chr2 102949986 102950109 -147737745 + L1MC4 LINE L1 7919 8041 -1 1122 269 114 14 chr2 102951389 102951757 -147736097 - MLT1J LTR MaLR -106 405 1 403 303 112 21 chr2 102951772 102951960 -147735894 + MIR SINE MIR 20 224 -38 330 228 0 51 chr2 102952965 102953044 -147734810 + MLT1H LTR MaLR 459 533 -16 281 286 174 47 chr2 102953398 102953436 -147734418 - L2 LINE L2 -60 3253 3221 2902 84 23 46 chr2 102953436 102953912 -147733942 - MER4C LTR ERV1 0 465 1 281 286 174 47 chr2 102953912 102954086 -147733768 - L2 LINE L2 -92 3221 3014 1549 160 6 28 chr2 102954645 102954963 -147732891 + AluJo SINE Alu 1 311 -1 611 265 122 24 chr2 102955852 102956139 -147731715 + L2 LINE L2 2937 3251 -62 403 237 112 65 chr2 102956184 102956226 -147731628 - MIR3 SINE MIR -13 195 156 1975 77 0 11 chr2 102956226 102956499 -147731355 + AluY SINE Alu 31 300 -11 403 237 112 65 chr2 102956499 102956625 -147731229 - MIR3 SINE MIR -52 156 19 4504 163 48 37 chr2 102956647 102957933 -147729921 - L1MB3 LINE L1 -4 6179 4869 237 132 0 0 chr2 102958442 102958480 -147729374 + (TG)n Simple_repeat Simple_repeat 1 38 0 349 314 171 9 chr2 102958733 102958943 -147728911 + MIR SINE MIR 6 249 -13 207 239 60 30 chr2 102959133 102959200 -147728654 + L3 LINE CR1 1507 1575 -2 556 216 0 0 chr2 102959335 102959432 -147728422 + LTR39 LTR ERV1 624 720 -63 477 148 0 0 chr2 102959432 102959513 -147728341 + (A)n Simple_repeat Simple_repeat 1 81 0 850 266 149 40 chr2 102959526 102959876 -147727978 - MLT1I LTR MaLR -20 389 2 359 343 114 0 chr2 102960095 102960270 -147727584 + MIR SINE MIR 33 227 -35 22 0 0 0 chr2 102960688 102960710 -147727144 + AT_rich Low_complexity Low_complexity 1 22 0 314 23 23 0 chr2 102960852 102960895 -147726959 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1691 157 114 15 chr2 102961324 102961656 -147726198 - MER47A DNA MER2_type -1 365 1 198 71 0 0 chr2 102962052 102962080 -147725774 + (CA)n Simple_repeat Simple_repeat 1 28 0 366 186 0 0 chr2 102962086 102962145 -147725709 - MER2 DNA MER2_type -6 339 281 201 153 17 51 chr2 102962145 102962204 -147725650 + (CAAA)n Simple_repeat Simple_repeat 2 58 0 1613 164 13 126 chr2 102962220 102962610 -147725244 + MER7A DNA MER2_type 3 346 0 1005 164 10 36 chr2 102962610 102962805 -147725049 - MER2 DNA MER2_type -155 190 1 2008 130 3 0 chr2 102963020 102963319 -147724535 + AluSx SINE Alu 1 300 -12 1024 256 85 13 chr2 102963463 102963779 -147724075 + MER58B DNA MER1_type 3 341 0 786 177 0 0 chr2 102964015 102964139 -147723715 - AluJb SINE Alu -187 125 2 696 330 36 0 chr2 102964209 102964433 -147723421 + MIR SINE MIR 20 251 -11 467 228 228 26 chr2 102964481 102964670 -147723184 - MIR SINE MIR -1 261 35 559 202 79 17 chr2 102966749 102966927 -147720927 + MER5A DNA MER1_type 1 189 0 2325 83 0 6 chr2 102967206 102967518 -147720336 - AluSg SINE Alu 0 310 1 2064 67 3 11 chr2 102969670 102969984 -147717870 + AluY SINE Alu 1 312 0 318 303 105 12 chr2 102972965 102973127 -147714727 + MER5A DNA MER1_type 7 183 -6 257 327 67 10 chr2 102974600 102974704 -147713150 - L2 LINE L2 -3 3269 3160 669 264 181 28 chr2 102975018 102975306 -147712548 + L2 LINE L2 2981 3312 -1 1198 118 3 17 chr2 102975494 102975769 -147712085 - MLT1A1 LTR MaLR 0 365 1 696 220 54 18 chr2 102976008 102976176 -147711678 - MER63A DNA MER1_type 0 210 37 30 59 0 0 chr2 102976236 102976287 -147711567 + AT_rich Low_complexity Low_complexity 1 51 0 577 278 0 0 chr2 102976473 102976606 -147711248 + MIR SINE MIR 18 150 -112 858 246 79 0 chr2 102976751 102976954 -147710900 + MER58A DNA MER1_type 6 224 0 417 236 142 62 chr2 102977439 102977545 -147710309 + L1MC5 LINE L1 7603 7699 -262 265 30 0 0 chr2 102977545 102977578 -147710276 + (TTTA)n Simple_repeat Simple_repeat 2 144 0 2203 48 44 7 chr2 102977578 102977849 -147710005 - AluY SINE Alu -30 281 1 417 236 142 62 chr2 102977849 102978050 -147709804 + L1MC5 LINE L1 7698 7936 -25 306 220 149 71 chr2 102978099 102978240 -147709614 + L1ME3A LINE L1 5808 5959 -211 192 40 0 0 chr2 102978329 102978354 -147709500 + (TG)n Simple_repeat Simple_repeat 2 26 0 212 321 75 9 chr2 102978944 102979050 -147708804 + L2 LINE L2 3156 3268 -4 184 200 0 0 chr2 102979853 102979893 -147707961 - MIR SINE MIR -109 153 114 2060 179 116 39 chr2 102980504 102981022 -147706832 - MER74A LTR ERVL 0 558 1 1752 165 61 15 chr2 102981024 102981352 -147706502 + MER61A LTR ERV1 1 343 0 4860 98 6 1 chr2 102984271 102984954 -147702900 - L1PA13 LINE L1 -2 6161 5476 1056 67 0 98 chr2 102984954 102985118 -147702736 - AluY SINE Alu -29 282 135 9333 137 15 39 chr2 102985118 102986172 -147701682 - L1PA13 LINE L1 -684 5479 4499 1870 183 0 0 chr2 102986172 102986483 -147701371 - AluSx SINE Alu 0 312 2 9333 137 15 39 chr2 102986483 102987290 -147700564 - L1PA13 LINE L1 -1664 4499 3674 189 238 60 71 chr2 102987300 102987384 -147700470 - L2 LINE L2 -5 3308 3226 243 328 50 40 chr2 102987483 102987681 -147700173 - MLT1J LTR MaLR -193 318 119 520 225 18 13 chr2 102988123 102988350 -147699504 + GA-rich Low_complexity Low_complexity 1 228 0 216 0 0 0 chr2 102988525 102988549 -147699305 + (TTCA)n Simple_repeat Simple_repeat 2 25 0 247 346 0 0 chr2 102989336 102989417 -147698437 - MIR SINE MIR -81 127 47 2134 255 55 8 chr2 102989719 102990249 -147697605 + MLT1H1 LTR MaLR 1 555 0 1342 111 10 0 chr2 102990709 102990908 -147696946 + L1PB2 LINE L1 5951 6151 0 1614 61 14 5 chr2 102991356 102991568 -147696286 - L1PA8 LINE L1 -18 6154 5941 3278 146 13 9 chr2 102993226 102993754 -147694100 + L1MA8 LINE L1 5593 6122 -169 4752 68 3 7 chr2 102993754 102994359 -147693495 + L1PA8 LINE L1 5501 6103 -69 246 380 44 15 chr2 102996531 102996668 -147691186 + MIR3 SINE MIR 45 185 -23 2184 127 0 0 chr2 102997289 102997589 -147690265 + AluSq SINE Alu 1 300 -13 583 266 55 38 chr2 102998100 102998337 -147689517 + MIR SINE MIR 1 241 -21 1038 224 9 9 chr2 102998380 102998603 -147689251 - MER58A DNA MER1_type 0 224 2 224 302 0 0 chr2 103000000 103000053 -147687801 + (TATG)n Simple_repeat Simple_repeat 4 56 0 208 295 75 32 chr2 103000259 103000384 -147687470 - MIR SINE MIR -64 144 38 1872 214 24 30 chr2 103000608 103001034 -147686820 - MLT1F LTR MaLR -4 538 116 185 296 34 11 chr2 103001064 103001152 -147686702 + MIR3 SINE MIR 110 199 -9 225 263 50 38 chr2 103001284 103001364 -147686490 + MIR SINE MIR 18 98 -110 422 281 188 84 chr2 103002023 103002390 -147685464 - MLT1K LTR MaLR 0 588 184 1501 119 0 0 chr2 103002406 103002644 -147685210 + AluSg/x SINE Alu 79 316 0 283 56 0 0 chr2 103002608 103002676 -147685178 + (TAAAA)n Simple_repeat Simple_repeat 3 70 0 183 306 41 10 chr2 103004692 103004790 -147683064 - MIR SINE MIR -65 197 97 357 333 50 5 chr2 103005271 103005469 -147682385 + MIR SINE MIR 13 219 -43 190 224 20 0 chr2 103005585 103005634 -147682220 + MIR SINE MIR 89 138 -124 244 225 14 0 chr2 103005959 103006032 -147681822 - MIR SINE MIR -76 132 58 225 266 16 0 chr2 103006466 103006530 -147681324 - MER119 DNA MER1_type -514 69 5 219 188 43 14 chr2 103007658 103007727 -147680127 + (TA)n Simple_repeat Simple_repeat 2 72 0 225 184 0 0 chr2 103007733 103007771 -147680083 + MER58A DNA MER1_type 155 192 -32 428 106 15 0 chr2 103007881 103007947 -147679907 - MIR SINE MIR -138 124 58 361 318 14 0 chr2 103008705 103008853 -147679001 + MIR SINE MIR 85 234 -28 186 259 37 49 chr2 103008857 103008938 -147678916 + MER5B DNA MER1_type 28 107 -71 263 174 267 0 chr2 103009249 103009335 -147678519 - MER96 DNA MER1_type? -64 111 3 214 224 69 0 chr2 103009397 103009455 -147678399 + L2 LINE L2 3227 3288 -25 388 184 53 61 chr2 103009479 103009593 -147678261 - MIR SINE MIR -80 182 70 373 288 6 19 chr2 103012200 103012226 -147675628 - L1MA10 LINE L1 -2 6332 6307 2523 248 66 16 chr2 103012226 103012925 -147674929 - L1ME2 LINE L1 -18 6146 5413 2139 122 3 3 chr2 103013076 103013380 -147674474 + AluSx SINE Alu 1 304 -8 498 270 9 0 chr2 103013425 103013536 -147674318 + MER81 DNA DNA 1 112 -2 2205 108 18 78 chr2 103013685 103013761 -147674093 + THE1B LTR MaLR 1 80 -284 2568 54 3 0 chr2 103013761 103014058 -147673796 + AluY SINE Alu 1 298 -13 2205 108 18 78 chr2 103014058 103014368 -147673486 + THE1B LTR MaLR 80 364 0 420 97 0 0 chr2 103016028 103016090 -147671764 + (TG)n Simple_repeat Simple_repeat 2 63 0 323 287 157 43 chr2 103017426 103017656 -147670198 - MLT1L LTR MaLR -15 600 345 2197 119 0 10 chr2 103017877 103018188 -147669666 + AluSx SINE Alu 1 308 -4 227 280 11 21 chr2 103018404 103018497 -147669357 - L1ME2 LINE L1 -676 5445 5354 424 256 58 64 chr2 103019085 103019241 -147668613 - L2 LINE L2 0 3313 3159 724 205 153 90 chr2 103020058 103020580 -147667274 - MLT1H1 LTR MaLR 0 555 1 251 232 107 9 chr2 103020702 103020814 -147667040 + L1ME4a LINE L1 5999 6121 0 26 0 0 0 chr2 103020818 103020844 -147667010 + AT_rich Low_complexity Low_complexity 1 26 0 2600 260 70 36 chr2 103021822 103022080 -147665774 - L1MEc LINE L1 -4343 2053 1805 2115 76 0 0 chr2 103022080 103022331 -147665523 - AluY SINE Alu -12 299 49 2600 260 70 36 chr2 103022331 103022961 -147664893 - L1MEc LINE L1 -4591 1805 1110 2090 144 3 3 chr2 103022961 103023273 -147664581 - AluSx SINE Alu 0 312 1 2600 260 70 36 chr2 103023273 103023618 -147664236 - L1MEc LINE L1 -5286 1110 778 9564 218 37 12 chr2 103023623 103024465 -147663389 + L1MB7 LINE L1 2633 3453 -2731 342 0 0 0 chr2 103024465 103024503 -147663351 + (CA)n Simple_repeat Simple_repeat 1 38 0 9564 218 37 12 chr2 103024503 103024956 -147662898 + L1MB7 LINE L1 3453 3893 -2291 207 0 0 0 chr2 103024956 103024979 -147662875 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9564 218 37 12 chr2 103024979 103027147 -147660707 + L1MB7 LINE L1 3893 6183 -1 329 222 122 0 chr2 103027872 103027962 -147659892 - MER5A DNA MER1_type -3 186 86 2330 96 0 0 chr2 103029566 103029858 -147657996 + AluSg SINE Alu 1 292 -18 235 256 33 22 chr2 103030339 103030429 -147657425 + LTR37B LTR ERV1 209 299 -169 235 238 63 0 chr2 103030433 103030496 -147657358 - L1ME3A LINE L1 -15 6391 6325 2133 285 50 41 chr2 103030501 103031839 -147656015 - L1ME3A LINE L1 -367 6031 4638 235 162 0 0 chr2 103031839 103031876 -147655978 - Tigger1 DNA MER2_type -903 1515 1479 2133 285 50 41 chr2 103031876 103032094 -147655760 - L1ME3A LINE L1 -1760 4638 4423 1098 277 111 30 chr2 103032088 103032746 -147655108 - L1ME3A LINE L1 -4736 1648 938 * 15102 123 39 15 chr2 103032860 103033391 -147654463 - Tigger1 DNA MER2_type -1 2417 1900 1652 151 108 43 chr2 103033391 103033743 -147654111 + THE1C LTR MaLR 1 375 0 15102 123 39 15 chr2 103033743 103035572 -147652282 - Tigger1 DNA MER2_type -518 1900 1 257 258 76 8 chr2 103035573 103035731 -147652123 - L1MCc LINE L1 -4787 2154 2059 2524 72 0 3 chr2 103035731 103036036 -147651818 - AluY SINE Alu -7 304 1 592 313 94 13 chr2 103036222 103036825 -147651029 - L1MCc LINE L1 -4884 1955 1260 3048 147 10 4 chr2 103037401 103037885 -147649969 - L1MA4A LINE L1 -15 6288 5802 310 220 17 85 chr2 103038384 103038502 -147649352 + LTR37B LTR ERV1 285 394 -74 1837 221 17 10 chr2 103039238 103039645 -147648209 - L1ME LINE L1 -503 5663 5254 189 0 0 0 chr2 103039924 103039945 -147647909 + (CCAA)n Simple_repeat Simple_repeat 2 22 0 180 219 0 0 chr2 103040719 103040760 -147647094 + (TA)n Simple_repeat Simple_repeat 2 42 0 665 223 46 35 chr2 103040760 103040957 -147646897 + L1ME1 LINE L1 5905 6103 -63 2391 78 0 0 chr2 103041625 103041920 -147645934 + AluSc SINE Alu 1 295 -14 541 289 104 22 chr2 103041947 103042638 -147645216 - L1ME3 LINE L1 -277 5885 5127 226 289 0 12 chr2 103042789 103042872 -147644982 - L1ME3 LINE L1 -1162 4984 4903 303 281 25 16 chr2 103042914 103043089 -147644765 - MLT1J2 LTR MaLR -1 408 279 424 235 76 0 chr2 103043277 103043409 -147644445 - L1ME3 LINE L1 -1298 4848 4707 * 659 287 80 67 chr2 103043406 103044379 -147643475 + L1M4 LINE L1 3237 4222 -1924 322 405 10 5 chr2 103045702 103045907 -147641947 - L3 LINE CR1 -705 872 667 433 307 145 56 chr2 103046266 103046624 -147641230 - L3 LINE CR1 -939 638 249 293 269 65 0 chr2 103047029 103047122 -147640732 - MER5A DNA MER1_type -80 109 11 422 235 49 26 chr2 103047142 103047283 -147640571 - MIR SINE MIR -67 141 15 219 218 0 0 chr2 103047387 103047442 -147640412 + (CA)n Simple_repeat Simple_repeat 1 55 0 197 139 23 0 chr2 103047867 103047910 -147639944 + (TG)n Simple_repeat Simple_repeat 2 45 0 367 270 135 22 chr2 103048221 103048337 -147639517 + MIR SINE MIR 46 190 -72 5034 126 21 0 chr2 103048337 103049065 -147638789 + L1PA15 LINE L1 5419 6161 -4 367 270 135 22 chr2 103049065 103049126 -147638728 + MIR SINE MIR 190 243 -19 2140 113 20 0 chr2 103049615 103049915 -147637939 + AluSx SINE Alu 1 306 -6 2302 106 0 6 chr2 103051254 103051566 -147636288 - AluY SINE Alu -1 310 1 234 81 0 0 chr2 103052130 103052167 -147635687 + (TG)n Simple_repeat Simple_repeat 1 37 0 237 185 92 108 chr2 103052464 103052594 -147635260 - L1ME4a LINE L1 -12 6109 5982 582 291 20 88 chr2 103052809 103053086 -147634768 - L1ME4a LINE L1 -448 5722 5470 4097 48 0 6 chr2 103053086 103053560 -147634294 + L1PA5 LINE L1 5684 6154 0 582 291 20 88 chr2 103053560 103053613 -147634241 - L1ME4a LINE L1 -700 5470 5415 273 57 0 0 chr2 103054110 103054145 -147633709 + (TG)n Simple_repeat Simple_repeat 1 35 0 279 331 52 35 chr2 103054296 103054468 -147633386 + L2 LINE L2 3098 3272 0 396 0 0 0 chr2 103054848 103054892 -147632962 + (TAA)n Simple_repeat Simple_repeat 2 45 0 425 267 89 22 chr2 103054950 103055085 -147632769 - MIR SINE MIR -94 168 25 403 286 96 32 chr2 103055174 103055394 -147632460 - MIR SINE MIR -4 258 25 779 260 38 73 chr2 103056145 103056514 -147631340 - L1MC/D LINE L1 -2051 5757 5402 242 300 0 0 chr2 103057413 103057473 -147630381 - L2 LINE L2 -9 3304 3245 330 45 0 0 chr2 103058214 103058258 -147629596 + (TG)n Simple_repeat Simple_repeat 2 45 0 1890 161 33 46 chr2 103058674 103059040 -147628814 + MLT1A1 LTR MaLR 5 365 0 242 350 57 41 chr2 103059760 103059883 -147627971 - MIR SINE MIR -76 132 7 733 184 75 52 chr2 103060941 103061115 -147626739 - MER5B DNA MER1_type 0 178 1 223 102 20 20 chr2 103063846 103063895 -147623959 + (TA)n Simple_repeat Simple_repeat 2 50 0 2664 208 138 9 chr2 103063905 103064549 -147623305 + MER21B LTR ERV1 13 739 -124 2374 92 0 3 chr2 103064638 103064943 -147622911 + AluY SINE Alu 1 304 -7 1797 172 56 9 chr2 103065550 103065887 -147621967 - L1MA9 LINE L1 -2 6310 5958 425 251 41 6 chr2 103066085 103066256 -147621598 + (TG)n Simple_repeat Simple_repeat 2 178 0 264 297 0 69 chr2 103066308 103066409 -147621445 - L2 LINE L2 -25 3247 3154 391 229 106 64 chr2 103066595 103066783 -147621071 + L2 LINE L2 3118 3313 0 546 104 38 47 chr2 103067614 103067720 -147620134 + MER104 DNA Tc2 24 128 -52 2028 124 0 7 chr2 103069396 103069720 -147618134 + AluSx SINE Alu 1 322 0 180 171 14 29 chr2 103069818 103069888 -147617966 + GA-rich Low_complexity Low_complexity 4 72 0 273 171 0 0 chr2 103070001 103070042 -147617812 - THE1C LTR MaLR 0 428 388 2078 121 7 0 chr2 103070042 103070322 -147617532 + AluSx SINE Alu 1 282 -30 1831 146 46 43 chr2 103070340 103070538 -147617316 - THE1C LTR MaLR -23 352 151 2247 118 7 0 chr2 103070538 103070834 -147617020 + AluSx SINE Alu 1 298 -14 1831 146 46 43 chr2 103070834 103070985 -147616869 - THE1C LTR MaLR -224 151 2 1974 269 73 29 chr2 103071936 103072591 -147615263 - MER20B DNA MER1_type 0 783 100 670 240 10 36 chr2 103073319 103073515 -147614339 - L2 LINE L2 0 3313 3123 411 38 0 0 chr2 103073546 103073599 -147614255 + (TG)n Simple_repeat Simple_repeat 2 54 0 753 285 28 9 chr2 103074370 103074584 -147613270 - MIR SINE MIR -42 220 3 303 286 41 41 chr2 103074726 103074824 -147613030 + MIR SINE MIR 54 151 -111 1610 179 0 29 chr2 103074828 103075135 -147612719 + AluJo SINE Alu 7 304 -8 360 0 0 0 chr2 103075159 103075199 -147612655 + (CAA)n Simple_repeat Simple_repeat 3 42 0 1564 218 64 34 chr2 103075693 103076161 -147611693 - Charlie1b DNA MER1_type -5 518 37 926 233 52 9 chr2 103076688 103076920 -147610934 + L1MEc LINE L1 35 276 -6120 4170 247 115 13 chr2 103076921 103078352 -147609502 + L1MEc LINE L1 447 2022 -4374 * 4769 221 54 37 chr2 103078334 103078870 -147608984 + L1MEc LINE L1 3051 3576 -2639 2395 81 0 0 chr2 103078870 103079165 -147608689 + AluY SINE Alu 6 300 -11 4769 221 54 37 chr2 103079165 103080099 -147607755 + L1MEc LINE L1 3576 4527 -1688 2414 93 3 3 chr2 103080268 103080580 -147607274 - AluSp SINE Alu -1 312 1 902 175 50 5 chr2 103081644 103081844 -147606010 + MER3 DNA MER1_type 1 209 0 2403 86 0 3 chr2 103082277 103082578 -147605276 - AluSg SINE Alu -10 300 1 1410 231 89 80 chr2 103083157 103083707 -147604147 - MLT1H1 LTR MaLR 0 555 1 2711 143 9 12 chr2 103085399 103085826 -147602028 + MSTB LTR MaLR 1 426 0 389 243 150 0 chr2 103087137 103087277 -147600577 - MER5B DNA MER1_type -10 168 8 194 341 45 0 chr2 103087844 103087932 -147599922 + MIR3 SINE MIR 79 170 -38 392 215 69 77 chr2 103088066 103088196 -147599658 - MIR SINE MIR -29 233 105 35 78 0 0 chr2 103088705 103088782 -147599072 + GC_rich Low_complexity Low_complexity 1 77 0 213 324 0 0 chr2 103089461 103089532 -147598322 - MIR SINE MIR -74 188 118 455 248 0 26 chr2 103090445 103090558 -147597296 - L2 LINE L2 0 3313 3204 267 306 157 0 chr2 103091637 103091784 -147596070 + MER5B DNA MER1_type 4 173 -5 1351 259 168 26 chr2 103092162 103092848 -147595006 - MER20B DNA MER1_type 0 783 1 408 255 116 26 chr2 103092988 103093183 -147594671 + L1ME1 LINE L1 5962 6165 -1 538 156 0 0 chr2 103094771 103094884 -147592970 + AluJb SINE Alu 207 319 0 487 280 14 72 chr2 103095355 103095562 -147592292 + MER115 DNA AcHobo 43 237 -456 233 299 15 15 chr2 103095943 103096010 -147591844 - LTR67 LTR ERVL -452 105 39 225 154 0 0 chr2 103097337 103097376 -147590478 + CT-rich Low_complexity Low_complexity 2 40 0 2646 61 0 0 chr2 103098126 103098437 -147589417 + AluY SINE Alu 1 311 0 2150 112 70 20 chr2 103099406 103099763 -147588091 + THE1C LTR MaLR 1 375 0 342 269 78 21 chr2 103101100 103101241 -147586613 - MIR SINE MIR -3 259 111 2111 136 0 3 chr2 103102420 103102715 -147585139 - AluSx SINE Alu -18 294 1 318 235 107 15 chr2 103103862 103103996 -147583858 - MIR3 SINE MIR -70 138 8 1570 273 109 35 chr2 103104144 103105188 -147582666 - L2 LINE L2 -40 3273 2150 1716 262 128 26 chr2 103105192 103105960 -147581894 - L1M4 LINE L1 -5683 859 14 739 253 163 6 chr2 103106001 103106321 -147581533 - L1MEc LINE L1 -2670 3545 3176 1479 267 35 20 chr2 103106324 103106834 -147581020 + MER74B LTR ERVL 55 572 -50 5550 236 60 44 chr2 103106887 103107572 -147580282 - L1MEc LINE L1 -3034 3181 2508 1984 128 3 26 chr2 103107572 103107904 -147579950 - AluSx SINE Alu 0 312 1 5550 236 60 44 chr2 103107904 103108004 -147579850 - L1MEc LINE L1 -3707 2508 2411 544 129 89 0 chr2 103108004 103108105 -147579749 - L1MA9 LINE L1 -10 6302 6193 5550 236 60 44 chr2 103108105 103110222 -147577632 - L1MEc LINE L1 -3804 2411 238 707 201 7 7 chr2 103110235 103110389 -147577465 - L1MEc LINE L1 -6199 197 44 287 241 22 50 chr2 103110407 103110526 -147577328 - MIR SINE MIR -62 146 35 206 219 164 0 chr2 103112638 103112711 -147575143 + MIR SINE MIR 104 188 -74 494 274 9 0 chr2 103112967 103113080 -147574774 + MER94 DNA DNA 21 134 0 24 0 0 0 chr2 103113122 103113146 -147574708 + AT_rich Low_complexity Low_complexity 1 24 0 2626 46 0 3 chr2 103113345 103113650 -147574204 - AluY SINE Alu -7 304 1 357 221 87 0 chr2 103113794 103113898 -147573956 - L2 LINE L2 -8 3305 3193 910 186 9 63 chr2 103115212 103115433 -147572421 - MER3 DNA MER1_type 0 209 1 724 204 46 62 chr2 103115691 103115931 -147571923 - MER106A DNA MER1_type 0 236 1 335 326 82 41 chr2 103116067 103116601 -147571253 + L1ME4a LINE L1 3888 4443 -1703 1979 141 0 3 chr2 103116681 103116965 -147570889 + AluSx SINE Alu 1 283 -29 354 291 184 29 chr2 103117002 103117415 -147570439 + L1ME4a LINE L1 5342 5818 -1990 374 244 75 25 chr2 103117506 103117666 -147570188 + L1ME4a LINE L1 5952 6119 -2 225 0 0 0 chr2 103117934 103117959 -147569895 + (T)n Simple_repeat Simple_repeat 1 25 0 195 336 45 0 chr2 103118805 103118915 -147568939 + L2 LINE L2 2935 3049 -223 188 383 26 43 chr2 103119020 103119135 -147568719 + L2 LINE L2 3140 3252 -20 1055 239 41 78 chr2 103119342 103119806 -147568048 + L1ME LINE L1 4326 4772 -1374 629 232 0 21 chr2 103121947 103122089 -147565765 + FRAM SINE Alu 8 146 -30 21 0 0 0 chr2 103122089 103122110 -147565744 + AT_rich Low_complexity Low_complexity 1 21 0 2139 111 3 0 chr2 103122886 103123174 -147564680 + AluSx SINE Alu 1 289 -23 269 284 178 18 chr2 103126360 103126529 -147561325 + MIR SINE MIR 61 256 -6 265 235 122 9 chr2 103128915 103129030 -147558824 - L1ME4a LINE L1 -3 6118 5991 306 326 111 4 chr2 103129046 103129307 -147558547 - L1ME4a LINE L1 -191 5930 5642 928 92 0 129 chr2 103129492 103129655 -147558199 + AluSx SINE Alu 49 190 -122 374 270 199 39 chr2 103129708 103130045 -147557809 + L2 LINE L2 2921 3311 -2 318 296 120 25 chr2 103130924 103131199 -147556655 + L1ME LINE L1 5458 5769 -395 2238 203 40 8 chr2 103131784 103132257 -147555597 + Charlie1b DNA MER1_type 2 489 -34 2533 49 0 13 chr2 103134205 103134511 -147553343 + AluY SINE Alu 1 302 -9 1735 116 23 104 chr2 103135508 103135854 -147552000 - AluYb8 SINE Alu 0 318 1 306 236 363 6 chr2 103136013 103136232 -147551622 - MER102b DNA MER1_type -48 293 4 400 239 97 9 chr2 103136234 103136347 -147551507 + MIR SINE MIR 70 192 -70 1755 205 56 132 chr2 103136873 103137691 -147550163 - L1MC4 LINE L1 0 8042 7287 421 310 82 37 chr2 103138692 103138948 -147548906 - L1M4 LINE L1 -2613 3533 3255 240 111 0 0 chr2 103138948 103138984 -147548870 + (CA)n Simple_repeat Simple_repeat 2 37 0 421 310 82 37 chr2 103138984 103139082 -147548772 - L1M4 LINE L1 -2891 3255 3163 277 281 50 72 chr2 103139082 103139303 -147548551 - L1ME LINE L1 -374 5747 5532 186 43 0 0 chr2 103139303 103139326 -147548528 + (TTTTA)n Simple_repeat Simple_repeat 5 27 0 627 110 24 0 chr2 103139326 103139408 -147548446 - AluJo SINE Alu -32 280 197 805 175 7 7 chr2 103139411 103139554 -147548300 - AluJo SINE Alu -169 143 1 356 247 77 16 chr2 103139560 103139819 -147548035 - L1ME LINE L1 -655 5529 5265 1919 265 98 25 chr2 103139863 103140614 -147547240 - L1ME3A LINE L1 -7 6163 5358 808 182 0 8 chr2 103140660 103140792 -147547062 - FRAM SINE Alu -22 154 24 1012 252 10 0 chr2 103140816 103141022 -147546832 - MER58A DNA MER1_type -15 209 2 459 285 109 8 chr2 103141022 103141289 -147546565 - L1ME3A LINE L1 -842 5304 5011 1854 154 3 3 chr2 103141450 103141916 -147545938 - AluSx SINE Alu 0 466 1 264 382 18 18 chr2 103142059 103142224 -147545630 + MER5B DNA MER1_type 11 175 -3 277 156 0 0 chr2 103142328 103142373 -147545481 + MIR3 SINE MIR 110 154 -54 391 340 72 19 chr2 103142433 103142695 -147545159 - L2 LINE L2 -98 3174 2899 194 386 38 8 chr2 103142792 103142924 -147544930 - L2 LINE L2 -582 2732 2597 264 313 130 30 chr2 103143068 103143407 -147544447 - L2 LINE L2 -2086 1228 856 201 283 19 66 chr2 103143979 103144085 -147543769 + MIR SINE MIR 162 262 0 1174 193 9 0 chr2 103145779 103145991 -147541863 + AluJb SINE Alu 1 214 -98 198 0 0 0 chr2 103146020 103146042 -147541812 + (A)n Simple_repeat Simple_repeat 1 22 0 310 318 124 0 chr2 103146388 103146517 -147541337 + L2 LINE L2 3128 3272 0 227 217 17 0 chr2 103147211 103147271 -147540583 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 262 147 29 0 chr2 103147294 103147362 -147540492 + (TCTA)n Simple_repeat Simple_repeat 2 71 0 22 0 0 0 chr2 103148189 103148211 -147539643 + AT_rich Low_complexity Low_complexity 1 22 0 279 73 0 0 chr2 103148211 103148252 -147539602 - L1MA3 LINE L1 0 6305 6265 223 175 88 18 chr2 103148252 103148366 -147539488 + (TA)n Simple_repeat Simple_repeat 2 123 0 20867 158 37 21 chr2 103148366 103154220 -147533634 - L1 LINE L1 -1616 5949 13 236 344 32 0 chr2 103154237 103154330 -147533524 - MIR SINE MIR -83 125 30 308 302 38 9 chr2 103154822 103154928 -147532926 + L2 LINE L2 3203 3311 -2 369 328 42 88 chr2 103155045 103155520 -147532334 - L2 LINE L2 -1 3271 2819 1225 334 89 34 chr2 103155763 103156877 -147530977 - L2 LINE L2 -3 3310 2135 387 255 0 51 chr2 103157375 103157532 -147530322 - L1MC5 LINE L1 -83 7878 7730 * 424 204 41 0 chr2 103157485 103157583 -147530271 + L1MD1 LINE L1 5882 5983 -259 2303 58 11 4 chr2 103158589 103158901 -147528953 + AluY SINE Alu 1 314 0 337 278 80 80 chr2 103159205 103159300 -147528554 + L1M4 LINE L1 2759 2853 -3293 827 109 8 0 chr2 103159300 103159428 -147528426 + L1MA7 LINE L1 6162 6290 -1 337 278 80 80 chr2 103159428 103159732 -147528122 + L1M4 LINE L1 2852 3158 -2988 535 322 48 46 chr2 103160073 103160657 -147527197 + L1M4 LINE L1 4124 4708 -1438 2025 283 45 34 chr2 103160709 103161359 -147526495 + L1 LINE L1 9 665 -6124 2995 211 23 37 chr2 103161476 103162173 -147525681 + L1 LINE L1 1251 1937 -4852 1896 211 47 55 chr2 103162189 103163181 -147524673 - L1 LINE L1 -3738 3827 2835 4762 150 4 28 chr2 103163182 103163983 -147523871 + L1 LINE L1 5153 5933 -855 185 0 40 0 chr2 103163983 103164008 -147523846 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 4762 150 4 28 chr2 103164008 103164051 -147523803 + L1 LINE L1 5933 5976 -812 370 330 67 21 chr2 103164347 103164554 -147523300 + MIR3 SINE MIR 10 218 -44 231 36 0 0 chr2 103166577 103166605 -147521249 + (TG)n Simple_repeat Simple_repeat 2 29 0 259 314 33 39 chr2 103167360 103167513 -147520341 + L2 LINE L2 2371 2522 -792 407 314 52 26 chr2 103167570 103167723 -147520131 + MIR SINE MIR 30 186 -76 619 292 75 81 chr2 103167847 103168385 -147519469 - L1ME3A LINE L1 -81 6081 5549 254 290 14 0 chr2 103168886 103168955 -147518899 + MER117 DNA MER1_type 64 133 -64 5003 126 1 8 chr2 103170035 103170776 -147517078 + L1MA4 LINE L1 5558 6293 -7 32 0 0 0 chr2 103171754 103171786 -147516068 + AT_rich Low_complexity Low_complexity 1 32 0 322 213 21 0 chr2 103172528 103172622 -147515232 + GA-rich Low_complexity Low_complexity 2 97 0 274 202 12 12 chr2 103172640 103172724 -147515130 + GA-rich Low_complexity Low_complexity 2 85 0 240 35 0 0 chr2 103172981 103173010 -147514844 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 366 259 71 9 chr2 103175140 103175252 -147512602 - MLT1G1 LTR MaLR -476 119 1 333 316 59 15 chr2 103175336 103175472 -147512382 + MIR SINE MIR 47 188 -74 319 314 0 0 chr2 103176587 103176673 -147511181 + (TG)n Simple_repeat Simple_repeat 2 87 0 1481 112 24 0 chr2 103177194 103177439 -147510415 + AluSq SINE Alu 72 321 0 1158 183 66 52 chr2 103177926 103178016 -147509838 - AluJo SINE Alu -13 299 212 2315 94 3 3 chr2 103178016 103178314 -147509540 - AluSq SINE Alu -15 298 1 1158 183 66 52 chr2 103178314 103178512 -147509342 - AluJo SINE Alu -100 212 7 360 326 58 23 chr2 103179515 103179687 -147508167 + MIR SINE MIR 66 243 -19 426 297 34 0 chr2 103179796 103179914 -147507940 - L2 LINE L2 0 3313 3192 2008 140 25 0 chr2 103180414 103180700 -147507154 + AluSx SINE Alu 1 293 -19 906 161 81 0 chr2 103182471 103182645 -147505209 - L1MB3 LINE L1 -3 6180 5993 335 94 0 0 chr2 103186271 103186324 -147501530 - AluSp SINE Alu 0 303 251 297 155 35 35 chr2 103186314 103186372 -147501482 - AluSp SINE Alu -126 177 120 * 248 267 33 87 chr2 103187228 103187378 -147500476 + MIR SINE MIR 10 151 -111 306 253 133 40 chr2 103187523 103187673 -147500181 - MIR SINE MIR -20 242 79 728 206 18 41 chr2 103187700 103187918 -147499936 + L1MC5 LINE L1 7620 7832 -129 1744 223 76 22 chr2 103188228 103188717 -147499137 - MLT2B2 LTR ERVL 0 515 1 266 227 43 78 chr2 103188762 103188903 -147498951 - L1ME LINE L1 -450 5671 5536 2241 112 0 3 chr2 103189698 103189994 -147497860 - AluSx SINE Alu -17 295 1 395 306 115 24 chr2 103193371 103193659 -147494195 + L1MC2 LINE L1 5272 5585 -2223 312 274 115 18 chr2 103193672 103193979 -147493875 + L1MC2 LINE L1 5633 5910 -469 192 120 40 80 chr2 103194725 103194775 -147493079 - MIR SINE MIR -14 248 201 470 236 77 104 chr2 103195236 103195495 -147492359 + MLT1K LTR MaLR 337 588 0 4325 132 50 9 chr2 103197816 103198573 -147489281 - L1PB4 LINE L1 0 6156 5369 695 316 116 19 chr2 103200931 103201565 -147486289 - L1 LINE L1 -1719 4427 3718 1858 126 0 94 chr2 103201631 103201973 -147485881 + AluY SINE Alu 2 311 0 21 36 0 0 chr2 103202164 103202192 -147485662 + AT_rich Low_complexity Low_complexity 1 28 0 366 293 71 60 chr2 103202444 103202796 -147485058 - L1 LINE L1 -3005 3141 2786 457 187 28 28 chr2 103204089 103204196 -147483658 + MER20 DNA MER1_type 113 219 0 228 308 0 0 chr2 103205565 103205643 -147482211 + MIR3 SINE MIR 83 160 -48 272 239 0 15 chr2 103205644 103205711 -147482143 - MER5B DNA MER1_type -1 177 112 573 151 0 17 chr2 103205912 103206176 -147481678 + AluJo SINE Alu 1 312 0 661 234 117 0 chr2 103206212 103206451 -147481403 + L1ME4a LINE L1 5617 5883 -238 24 0 0 0 chr2 103206456 103206480 -147481374 + AT_rich Low_complexity Low_complexity 1 24 0 2274 115 0 7 chr2 103206482 103206787 -147481067 + AluSq SINE Alu 1 303 -10 298 252 42 25 chr2 103206787 103206906 -147480948 + L1ME4a LINE L1 5947 6067 -54 489 247 5 121 chr2 103207456 103207646 -147480208 - MER91A DNA MER1_type -11 185 18 187 341 54 47 chr2 103207737 103207995 -147479859 - L2 LINE L2 -568 2746 2487 270 295 189 31 chr2 103207997 103208485 -147479369 - L2 LINE L2 -1048 2266 1702 361 339 17 0 chr2 103208972 103209087 -147478767 + L2 LINE L2 3153 3269 -3 2422 93 0 3 chr2 103210453 103210753 -147477101 + AluSc SINE Alu 1 299 -10 1254 223 12 8 chr2 103211014 103211341 -147476513 - MLT1B LTR MaLR 0 390 8 279 221 15 15 chr2 103211382 103211450 -147476404 + tRNA-Met-i tRNA tRNA 1 68 -7 1898 142 10 7 chr2 103211466 103211776 -147476078 + L1MB3 LINE L1 5855 6165 -18 3931 288 150 20 chr2 103213399 103215292 -147472562 + L2 LINE L2 40 2436 -877 2290 99 0 16 chr2 103215292 103215595 -147472259 - AluSx SINE Alu -14 298 1 3931 288 150 20 chr2 103215595 103216569 -147471285 + L2 LINE L2 2436 3282 -31 588 240 0 0 chr2 103216599 103216887 -147470967 + (TGGA)n Simple_repeat Simple_repeat 1 288 0 334 321 136 53 chr2 103217279 103217581 -147470273 - L2 LINE L2 0 3272 2946 2015 138 3 10 chr2 103218372 103218683 -147469171 - AluSx SINE Alu -3 309 1 22 35 0 0 chr2 103219513 103219542 -147468312 + AT_rich Low_complexity Low_complexity 1 29 0 361 241 176 10 chr2 103220092 103220291 -147467563 + MIR SINE MIR 19 250 -12 388 253 0 23 chr2 103220325 103220412 -147467442 - LTR34 LTR ERV1 -4 695 611 3472 106 16 44 chr2 103220412 103220728 -147467126 + MER4B LTR ERV1 1 324 -455 3100 163 24 66 chr2 103220728 103221367 -147466487 + LTR9 LTR ERV1 1 612 0 3472 106 16 44 chr2 103221367 103221672 -147466182 + MER4B LTR ERV1 324 779 0 2642 135 17 150 chr2 103221672 103222381 -147465473 - LTR34 LTR ERV1 -85 614 1 1757 181 3 3 chr2 103222446 103222738 -147465116 + AluJo SINE Alu 2 293 -19 183 129 0 0 chr2 103224109 103224140 -147463714 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 1061 121 0 13 chr2 103224216 103224410 -147463444 + AluSg/x SINE Alu 144 310 0 615 253 78 12 chr2 103225602 103225768 -147462086 - MER82 DNA MER2_type -1 652 476 33 85 0 0 chr2 103226682 103226764 -147461090 + AT_rich Low_complexity Low_complexity 1 82 0 420 329 93 18 chr2 103227287 103227512 -147460342 + MIR SINE MIR 3 244 -18 437 287 51 0 chr2 103228530 103228687 -147459167 - MER117 DNA MER1_type -27 170 6 718 317 126 34 chr2 103229604 103230311 -147457543 + L2 LINE L2 1867 2638 -676 1619 275 95 35 chr2 103230314 103230863 -147456991 + MLT1G LTR MaLR 9 590 0 238 340 134 22 chr2 103230908 103231212 -147456642 + L2 LINE L2 2724 3070 -202 595 333 19 0 chr2 103231616 103231823 -147456031 - MIR SINE MIR -18 244 34 2596 272 62 59 chr2 103231993 103233320 -147454534 + L1MEc LINE L1 26 1347 -4868 2068 119 11 0 chr2 103233320 103233605 -147454249 + AluSx SINE Alu 1 288 -24 2596 272 62 59 chr2 103233605 103235059 -147452795 + L1MEc LINE L1 1347 2774 -3441 823 234 21 42 chr2 103235154 103235393 -147452461 + MLT1F LTR MaLR 309 542 0 411 236 114 0 chr2 103235404 103235527 -147452327 + L1ME2 LINE L1 6019 6155 -9 1102 50 0 0 chr2 103235965 103236105 -147451749 - L1P1 LINE L1 -427 5728 5589 1232 46 0 0 chr2 103236105 103236251 -147451603 + L1PA5 LINE L1 5997 6147 -7 439 231 151 0 chr2 103236258 103236457 -147451397 - LTR37B LTR ERV1 -4 464 236 60 0 0 0 chr2 103236641 103236701 -147451153 + AT_rich Low_complexity Low_complexity 1 60 0 186 71 0 0 chr2 103236701 103236729 -147451125 + (TAAAAA)n Simple_repeat Simple_repeat 5 32 0 188 324 27 27 chr2 103237677 103237751 -147450103 - MER5A DNA MER1_type -115 74 1 444 37 0 0 chr2 103237932 103237986 -147449868 + (TGG)n Simple_repeat Simple_repeat 3 56 0 2326 61 3 14 chr2 103238159 103238453 -147449401 + AluY SINE Alu 2 292 -19 289 312 186 7 chr2 103238538 103238710 -147449144 - MIR SINE MIR -50 212 15 200 333 10 29 chr2 103239018 103239120 -147448734 + GA-rich Low_complexity Low_complexity 6 105 0 2207 97 0 0 chr2 103239643 103239921 -147447933 - AluSg SINE Alu -32 278 1 398 252 0 61 chr2 103241230 103241377 -147446477 - MLT1J LTR MaLR -43 468 331 346 328 45 15 chr2 103242162 103242296 -147445558 + MIR3 SINE MIR 57 194 -14 2357 91 7 0 chr2 103242797 103243106 -147444748 + AluSq SINE Alu 3 313 0 22 0 0 0 chr2 103243318 103243340 -147444514 + AT_rich Low_complexity Low_complexity 1 22 0 204 67 0 0 chr2 103243979 103244009 -147443845 + (TG)n Simple_repeat Simple_repeat 1 30 0 237 247 12 37 chr2 103244448 103244529 -147443325 + (TATG)n Simple_repeat Simple_repeat 2 80 0 1000 221 23 37 chr2 103244588 103244936 -147442918 - L1ME1 LINE L1 -5 6161 5819 3104 240 30 3 chr2 103244970 103245933 -147441921 - L1MEc LINE L1 -2786 3429 2441 3001 237 31 19 chr2 103246080 103247092 -147440762 - L1MEc LINE L1 -3935 2461 1438 2807 252 121 19 chr2 103247130 103248315 -147439539 - L1MEc LINE L1 -5055 1341 36 33 56 0 0 chr2 103248404 103248458 -147439396 + AT_rich Low_complexity Low_complexity 1 54 0 302 264 165 0 chr2 103248499 103248620 -147439234 - L1ME1 LINE L1 -436 5685 5545 306 245 85 36 chr2 103248649 103248852 -147439002 - L1ME1 LINE L1 -675 5495 5282 260 214 18 0 chr2 103248859 103248915 -147438939 + (TG)n Simple_repeat Simple_repeat 2 58 0 554 306 60 6 chr2 103249592 103249775 -147438079 + MIR SINE MIR 45 237 -25 354 23 0 0 chr2 103249971 103250014 -147437840 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 1542 230 103 34 chr2 103251559 103252064 -147435790 - MLT1F LTR MaLR -2 540 1 198 0 0 0 chr2 103252276 103252298 -147435556 + (GA)n Simple_repeat Simple_repeat 1 22 0 2108 142 0 0 chr2 103253120 103253593 -147434261 - AluSq SINE Alu 0 475 3 205 200 22 0 chr2 103253717 103253762 -147434092 + GA-rich Low_complexity Low_complexity 3 48 0 645 152 107 0 chr2 103254926 103255038 -147432816 - FLAM_C SINE Alu -19 124 1 2208 117 3 0 chr2 103255145 103255445 -147432409 + AluSp SINE Alu 1 301 -12 1318 147 5 0 chr2 103256070 103256292 -147431562 - AluSg/x SINE Alu 0 308 86 198 259 19 0 chr2 103256476 103256530 -147431324 - MIR SINE MIR -148 114 60 554 146 0 0 chr2 103256959 103257048 -147430806 + AluS SINE Alu 221 309 0 223 153 14 56 chr2 103257604 103257695 -147430159 + (TATAA)n Simple_repeat Simple_repeat 1 87 0 541 42 112 4 chr2 103257700 103257964 -147429890 + (TA)n Simple_repeat Simple_repeat 1 292 0 201 96 115 0 chr2 103257974 103258026 -147429828 + (TATAA)n Simple_repeat Simple_repeat 1 58 0 343 61 0 0 chr2 103258037 103258086 -147429768 - MER51-int LTR ERV1 -2742 5074 5026 337 42 0 0 chr2 103258088 103258136 -147429718 - MER57B LTR ERV1 0 434 387 28 61 0 0 chr2 103258166 103258215 -147429639 + AT_rich Low_complexity Low_complexity 1 49 0 364 337 53 58 chr2 103258946 103259189 -147428665 + MIR SINE MIR 13 254 -8 252 309 0 0 chr2 103259702 103259770 -147428084 + (TG)n Simple_repeat Simple_repeat 1 68 0 189 227 45 0 chr2 103260068 103260112 -147427742 - L2 LINE L2 -17 3255 3210 2564 135 62 2 chr2 103260557 103260980 -147426874 - MER83 LTR ERV1 0 448 1 2346 79 0 0 chr2 103262975 103263266 -147424588 + AluY SINE Alu 1 291 -20 22 0 0 0 chr2 103263519 103263541 -147424313 + AT_rich Low_complexity Low_complexity 1 22 0 2286 278 132 17 chr2 103263627 103264775 -147423079 - L2 LINE L2 -150 3163 1880 271 330 36 27 chr2 103265443 103265555 -147422299 - L2 LINE L2 -1 3312 3200 1854 185 0 0 chr2 103265594 103265891 -147421963 - AluJb SINE Alu -15 297 1 1613 269 173 39 chr2 103266304 103267278 -147420576 + L2 LINE L2 2161 3273 -40 224 75 0 25 chr2 103267894 103267934 -147419920 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 1343 145 26 0 chr2 103267943 103268171 -147419683 - MLT2C2 LTR ERVL -56 408 175 463 274 62 45 chr2 103268553 103268841 -147419013 - L1ME2 LINE L1 -10 6154 5862 766 191 135 4 chr2 103268887 103269139 -147418715 - L1ME2 LINE L1 -285 5879 5595 263 172 0 17 chr2 103269150 103269208 -147418646 + (TA)n Simple_repeat Simple_repeat 2 58 0 336 164 0 14 chr2 103269214 103269287 -147418567 - L1ME2 LINE L1 -16 6148 6077 2090 137 52 35 chr2 103269297 103269700 -147418154 - MSTB1 LTR MaLR -12 420 11 1594 219 108 2 chr2 103269740 103270253 -147417601 - L1ME2 LINE L1 -132 6034 5461 41394 47 3 1 chr2 103270274 103276404 -147411450 + L1PA4 LINE L1 7 6153 -2 1448 258 74 16 chr2 103276401 103277153 -147410701 - L1ME2 LINE L1 -713 5451 4641 * 1929 156 0 0 chr2 103277688 103277996 -147409858 + AluJb SINE Alu 1 308 0 1193 268 120 74 chr2 103277998 103278234 -147409620 - L2 LINE L2 -15 3298 3074 2420 184 16 8 chr2 103278234 103278739 -147409115 + L1MB5 LINE L1 5666 6174 0 1193 268 120 74 chr2 103278739 103279449 -147408405 - L2 LINE L2 -239 3074 2334 3303 162 48 15 chr2 103279507 103280187 -147407667 - L1PB4 LINE L1 0 6156 5454 240 268 85 65 chr2 103281294 103281447 -147406407 + MIR SINE MIR 20 175 -87 967 239 17 13 chr2 103282103 103282333 -147405521 + MIR SINE MIR 31 261 -1 32 0 0 0 chr2 103284247 103284279 -147403575 + AT_rich Low_complexity Low_complexity 1 32 0 704 278 58 33 chr2 103285478 103285719 -147402135 + MIR SINE MIR 12 258 -4 25 31 0 0 chr2 103285850 103285882 -147401972 + AT_rich Low_complexity Low_complexity 1 32 0 1866 147 4 0 chr2 103286233 103286499 -147401355 + AluSx SINE Alu 1 267 -45 381 22 0 0 chr2 103287949 103287995 -147399859 + (TG)n Simple_repeat Simple_repeat 2 47 0 2435 133 65 0 chr2 103289850 103290248 -147397606 - MSTA LTR MaLR -4 424 1 496 300 66 70 chr2 103290354 103290611 -147397243 + L2 LINE L2 3017 3272 0 608 264 30 0 chr2 103290948 103291115 -147396739 + MER97c DNA MER1_type? 11 182 -908 187 275 311 0 chr2 103292132 103292299 -147395555 - MIR SINE MIR 0 262 44 191 281 209 48 chr2 103293323 103293572 -147394282 + L2 LINE L2 2806 3094 -178 527 196 65 13 chr2 103296475 103296628 -147391226 + LTR33 LTR ERVL 10 170 -351 242 109 95 0 chr2 103298278 103298415 -147389439 + (TA)n Simple_repeat Simple_repeat 1 150 0 375 147 87 13 chr2 103298416 103298640 -147389214 + (TATAA)n Simple_repeat Simple_repeat 1 240 0 335 305 72 77 chr2 103298772 103299188 -147388666 + L2 LINE L2 1744 2157 -1157 841 304 142 18 chr2 103299278 103299736 -147388118 + L2 LINE L2 2056 2570 -744 430 285 93 31 chr2 103299839 103300162 -147387692 + L2 LINE L2 2416 2758 -556 4324 174 6 8 chr2 103300359 103300428 -147387426 - L1PB4 LINE L1 -769 5377 5309 2572 68 0 0 chr2 103300428 103300739 -147387115 - AluY SINE Alu 0 311 1 4324 174 6 8 chr2 103300739 103301532 -147386322 - L1PB4 LINE L1 -837 5309 4517 702 158 9 0 chr2 103301745 103301859 -147385995 + FLAM_C SINE Alu 3 117 -16 30 27 0 0 chr2 103301866 103301903 -147385951 + AT_rich Low_complexity Low_complexity 1 37 0 2220 108 3 0 chr2 103302000 103302296 -147385558 + AluSx SINE Alu 1 297 -15 426 300 68 42 chr2 103302384 103302927 -147384927 + L1MC4a LINE L1 5293 5849 -1959 730 218 18 0 chr2 103303636 103303806 -147384048 + MER58 DNA MER1_type 11 183 -2237 388 210 73 16 chr2 103303808 103303932 -147383922 + MER58 DNA MER1_type 2274 2404 -16 2238 103 3 3 chr2 103304120 103304420 -147383434 + AluSg SINE Alu 1 300 -10 5923 264 48 26 chr2 103304451 103306212 -147381642 + L1ME LINE L1 2633 4353 -1793 937 102 23 17 chr2 103306212 103306388 -147381466 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 207 0 0 0 chr2 103306388 103306411 -147381443 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 5923 264 48 26 chr2 103306411 103307216 -147380638 + L1ME LINE L1 4352 5258 -888 229 62 115 9 chr2 103307754 103307867 -147379987 + (TA)n Simple_repeat Simple_repeat 1 125 0 2684 233 81 52 chr2 103307894 103308878 -147378976 - L1ME LINE L1 -486 5678 4626 2115 95 7 14 chr2 103308878 103309163 -147378691 + AluSp SINE Alu 1 283 -30 2684 233 81 52 chr2 103309163 103309960 -147377894 - L1ME LINE L1 -1538 4626 3854 192 152 0 0 chr2 103310824 103310857 -147376997 + T-rich Low_complexity Low_complexity 1 33 0 597 288 83 22 chr2 103311277 103311506 -147376348 - MIR SINE MIR 0 262 20 2198 82 4 4 chr2 103311871 103312151 -147375703 + AluSg SINE Alu 27 306 -4 21 0 0 0 chr2 103312628 103312649 -147375205 + AT_rich Low_complexity Low_complexity 1 21 0 192 300 220 10 chr2 103312768 103312868 -147374986 + MIR3 SINE MIR 85 205 -3 336 259 161 0 chr2 103313249 103313361 -147374493 + MER5B DNA MER1_type 1 130 -48 258 288 0 45 chr2 103313528 103313660 -147374194 - L2 LINE L2 -115 3198 3073 205 176 0 0 chr2 103313660 103313694 -147374160 + (TG)n Simple_repeat Simple_repeat 1 34 0 391 274 55 52 chr2 103314092 103314480 -147373374 + L1ME LINE L1 5290 5679 -442 694 277 100 9 chr2 103314481 103314701 -147373153 - MIR SINE MIR 0 262 23 266 229 51 25 chr2 103314769 103314887 -147372967 + L1ME LINE L1 5772 5892 -229 2294 99 0 0 chr2 103314905 103315197 -147372657 - AluY SINE Alu -19 292 1 233 328 117 29 chr2 103316191 103316362 -147371492 - MIR SINE MIR -74 188 3 349 277 0 12 chr2 103316669 103316752 -147371102 - L2 LINE L2 -17 3255 3174 299 276 77 77 chr2 103317770 103317951 -147369903 + MER117 DNA MER1_type 10 190 -7 292 266 53 0 chr2 103318107 103318220 -147369634 + L1MC4a LINE L1 5783 5901 -1907 259 246 101 50 chr2 103318932 103319111 -147368743 + L1ME3A LINE L1 5759 5946 -224 2655 110 8 3 chr2 103319307 103319680 -147368174 - THE1C LTR MaLR 0 375 1 9660 123 39 24 chr2 103319680 103321236 -147366618 - THE1C-int LTR MaLR 0 1580 1 762 78 6 6 chr2 103321238 103321491 -147366363 - THE1C LTR MaLR -2 373 1 339 319 44 31 chr2 103325248 103325408 -147362446 + MIR SINE MIR 3 164 -98 1883 92 122 0 chr2 103325678 103325959 -147361895 - AluSq SINE Alu 0 313 1 181 302 0 0 chr2 103326080 103326123 -147361731 + MIR3 SINE MIR 112 154 -54 201 154 0 0 chr2 103326324 103326363 -147361491 + (TG)n Simple_repeat Simple_repeat 2 40 0 335 289 44 26 chr2 103327408 103327636 -147360218 - L1ME LINE L1 -352 5769 5538 2851 60 0 5 chr2 103327888 103328256 -147359598 + L1PA7 LINE L1 5786 6151 -3 2483 101 34 41 chr2 103328402 103328817 -147359037 + MER1A DNA MER1_type 118 529 0 2100 110 0 7 chr2 103329134 103329425 -147358429 + AluSc SINE Alu 4 292 -17 231 103 0 0 chr2 103330204 103330243 -147357611 + (TC)n Simple_repeat Simple_repeat 2 40 0 727 354 47 3 chr2 103331373 103331695 -147356159 - L3 LINE CR1 -29 1548 1213 1493 184 63 45 chr2 103331875 103331932 -147355922 - MLT1D LTR MaLR -118 387 333 2258 88 3 25 chr2 103331932 103332250 -147355604 - AluY SINE Alu 0 311 1 1493 184 63 45 chr2 103332250 103332572 -147355282 - MLT1D LTR MaLR -172 333 1 298 309 0 0 chr2 103332796 103332893 -147354961 - MIR SINE MIR -3 259 163 409 261 45 32 chr2 103332895 103333052 -147354802 + MIR SINE MIR 84 242 -20 209 363 37 58 chr2 103333197 103333387 -147354467 + L2 LINE L2 3076 3261 -11 318 349 41 12 chr2 103333408 103333580 -147354274 - L3 LINE CR1 -378 1199 1023 3156 127 107 37 chr2 103333661 103333796 -147354058 - MER39 LTR ERV1 0 707 583 2211 128 0 3 chr2 103333796 103334109 -147353745 + AluSx SINE Alu 1 312 0 3156 127 107 37 chr2 103334109 103334629 -147353225 - MER39 LTR ERV1 -124 583 6 2159 120 3 0 chr2 103336625 103336935 -147350919 + AluSx SINE Alu 1 311 0 477 340 91 5 chr2 103337158 103337355 -147350499 - MIR SINE MIR -35 227 14 1621 269 70 17 chr2 103337427 103338347 -147349507 - L1M4 LINE L1 -2973 3984 3017 262 232 98 18 chr2 103338534 103338646 -147349208 - L1M4 LINE L1 -5366 1493 1373 200 217 11 0 chr2 103342359 103342451 -147345403 + GA-rich Low_complexity Low_complexity 2 94 0 404 198 0 8 chr2 103342489 103342615 -147345239 + GA-rich Low_complexity Low_complexity 2 126 0 228 253 20 10 chr2 103342627 103342726 -147345128 + (CAGAGA)n Simple_repeat Simple_repeat 1 100 0 270 318 106 0 chr2 103342968 103343053 -147344801 - MIR SINE MIR -150 112 19 232 267 22 33 chr2 103343523 103343613 -147344241 + L1ME LINE L1 5591 5679 -442 269 261 9 0 chr2 103343629 103343744 -147344110 + (TA)n Simple_repeat Simple_repeat 1 116 0 363 339 37 55 chr2 103344118 103344336 -147343518 - MIR SINE MIR -40 222 9 2507 64 0 6 chr2 103345286 103345597 -147342257 + AluY SINE Alu 1 309 -2 1120 298 88 19 chr2 103345983 103346819 -147341035 - L1MC4a LINE L1 -751 5395 5008 199 179 75 75 chr2 103347182 103347249 -147340605 + MER5C DNA MER1_type 58 124 -200 188 179 0 26 chr2 103347346 103347385 -147340469 + MER5C DNA MER1_type 286 323 -1 23 68 0 0 chr2 103347557 103347601 -147340253 + AT_rich Low_complexity Low_complexity 1 44 0 241 318 85 23 chr2 103350012 103350141 -147337713 - L2 LINE L2 0 3313 3177 923 171 0 0 chr2 103350487 103350645 -147337209 + MER58B DNA MER1_type 184 341 0 922 273 48 0 chr2 103350740 103350989 -147336865 + MIR SINE MIR 2 262 0 779 271 67 17 chr2 103352399 103352639 -147335215 + MIR SINE MIR 2 253 -9 180 0 0 0 chr2 103355868 103355888 -147331966 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 248 287 94 25 chr2 103356536 103356738 -147331116 - L1MC4 LINE L1 -2 8040 7825 739 250 87 57 chr2 103356808 103357176 -147330678 - L1MC4a LINE L1 -899 6909 6531 23 33 0 0 chr2 103357498 103357528 -147330326 + AT_rich Low_complexity Low_complexity 1 30 0 1104 239 81 45 chr2 103357554 103358023 -147329831 - L1MC4a LINE L1 -1808 6000 5515 226 306 45 36 chr2 103358215 103358437 -147329417 - L1MC4a LINE L1 -1134 5012 4789 * 5087 149 25 9 chr2 103358434 103359396 -147328458 - L1MA6 LINE L1 -5 6295 5319 * 6231 168 19 29 chr2 103359390 103360721 -147327133 - L1MA6 LINE L1 -1592 4554 3237 1076 186 24 24 chr2 103360718 103360965 -147326889 + L1 LINE L1 2630 2876 -3270 * 380 313 108 17 chr2 103360974 103361214 -147326640 - L1MC4a LINE L1 -2191 3955 3694 502 269 160 14 chr2 103361241 103361591 -147326263 + HAL1 LINE L1 811 1211 -1296 310 247 0 52 chr2 103361608 103361685 -147326169 + HAL1 LINE L1 1296 1368 -1139 521 244 40 11 chr2 103361693 103361869 -147325985 + HAL1 LINE L1 1546 1726 -781 22 94 0 0 chr2 103362121 103362185 -147325669 + AT_rich Low_complexity Low_complexity 1 64 0 1868 294 116 4 chr2 103362189 103362872 -147324982 - L2 LINE L2 -2254 1060 302 662 139 41 0 chr2 103363119 103363241 -147324613 + LTR23 LTR ERV1 1 127 -310 3956 152 24 19 chr2 103363255 103364991 -147322863 + MER61D-int LTR ERV1 627 2353 -2864 2253 115 0 0 chr2 103364991 103365286 -147322568 - AluSx SINE Alu -17 295 1 3956 152 24 19 chr2 103365286 103365743 -147322111 + MER61D-int LTR ERV1 2353 4825 -392 8249 133 35 14 chr2 103366712 103368361 -147319493 + MER61D-int LTR ERV1 2600 6994 -2 2932 118 98 2 chr2 103368364 103368821 -147319033 + MER61D LTR ERV1 1 501 0 7389 150 16 12 chr2 103368821 103370177 -147317677 + LTR23-int LTR ERV1 4310 5669 -662 352 275 37 0 chr2 103370195 103370304 -147317550 + LTR23-int LTR ERV1 4789 4901 -222 2228 142 25 30 chr2 103370426 103370863 -147316991 + LTR23 LTR ERV1 2 436 -1 518 214 103 112 chr2 103371140 103371675 -147316179 - MLT1H LTR MaLR -2 588 18 2065 165 70 0 chr2 103371780 103372180 -147315674 + MSTA LTR MaLR 1 428 0 193 270 9 108 chr2 103374398 103374509 -147313345 + MIR SINE MIR 47 146 -116 280 330 71 33 chr2 103374883 103375065 -147312789 + MER5A DNA MER1_type 1 189 0 182 270 135 27 chr2 103375243 103375317 -147312537 - MIR3 SINE MIR -4 204 123 * 189 351 0 40 chr2 103375310 103375384 -147312470 - MER5B DNA MER1_type -39 139 69 283 312 0 26 chr2 103375397 103375474 -147312380 - MIR3 SINE MIR -52 156 82 508 287 84 42 chr2 103375700 103375986 -147311868 - L2 LINE L2 -12 3301 3004 26 0 0 0 chr2 103381080 103381106 -147306748 + AT_rich Low_complexity Low_complexity 1 26 0 640 194 39 13 chr2 103381138 103381293 -147306561 + L1 LINE L1 4826 4984 -1162 7926 228 55 21 chr2 103381305 103386951 -147300903 - L1MA8 LINE L1 -51 6444 880 22 0 0 0 chr2 103387419 103387441 -147300413 + AT_rich Low_complexity Low_complexity 1 22 0 1758 202 0 3 chr2 103387856 103388153 -147299701 - AluJo SINE Alu -11 301 6 2002 94 3 62 chr2 103388166 103388475 -147299379 - AluSx SINE Alu -16 296 6 1437 344 73 20 chr2 103388786 103389638 -147298216 - L3 LINE CR1 -498 1079 183 302 253 0 30 chr2 103391364 103391463 -147296391 + L1MC4 LINE L1 6608 6703 -1339 300 255 176 84 chr2 103392581 103392820 -147295034 - L1ME LINE L1 -597 5565 5305 331 342 116 36 chr2 103393355 103393691 -147294163 - L2 LINE L2 0 3272 2910 502 329 60 12 chr2 103393781 103394100 -147293754 - L2 LINE L2 -556 2758 2425 841 304 142 18 chr2 103394209 103394667 -147293187 - L2 LINE L2 -744 2570 2056 411 302 96 64 chr2 103394757 103395290 -147292564 - L2 LINE L2 -1157 2157 1608 350 286 38 65 chr2 103396066 103396240 -147291614 + MIR3 SINE MIR 8 172 -90 2222 118 0 0 chr2 103396240 103396537 -147291317 + AluSx SINE Alu 1 297 -15 350 286 38 65 chr2 103396537 103396583 -147291271 + MIR3 SINE MIR 172 218 -44 34 0 0 0 chr2 103396922 103396956 -147290898 + AT_rich Low_complexity Low_complexity 1 34 0 533 301 70 70 chr2 103398121 103398609 -147289245 + L3 LINE CR1 916 1403 -174 190 268 0 0 chr2 103399112 103399153 -147288701 + L2 LINE L2 3213 3253 -19 216 326 31 46 chr2 103399330 103399526 -147288328 + MIR SINE MIR 67 259 -3 243 292 15 28 chr2 103400070 103400205 -147287649 - MIR SINE MIR -23 239 25 198 118 0 0 chr2 103400230 103400264 -147287590 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 2237 105 0 82 chr2 103400933 103401233 -147286621 - L1PB2 LINE L1 -3 6148 5886 1686 42 28 9 chr2 103401233 103401447 -147286407 + AluY SINE Alu 82 299 -12 2237 105 0 82 chr2 103401447 103401538 -147286316 - L1PB2 LINE L1 -265 5886 5789 354 268 21 0 chr2 103402210 103402307 -147285547 + MIR SINE MIR 93 191 -71 198 0 0 0 chr2 103402341 103402363 -147285491 + (TATG)n Simple_repeat Simple_repeat 3 24 0 2200 108 0 10 chr2 103402363 103402668 -147285186 - AluSx SINE Alu -10 302 1 193 374 0 11 chr2 103402806 103402897 -147284957 - MIR SINE MIR -142 120 31 197 62 0 47 chr2 103402907 103402942 -147284912 + MIR SINE MIR 113 146 -62 2067 147 3 7 chr2 103403312 103403619 -147284235 + AluJb SINE Alu 1 306 -6 2103 133 3 0 chr2 103403621 103403922 -147283932 + AluSx SINE Alu 1 302 -10 274 259 24 47 chr2 103404273 103404358 -147283496 - MIR3 SINE MIR -1 207 125 321 299 77 0 chr2 103404902 103405019 -147282835 - MIR SINE MIR -11 251 126 2136 114 23 0 chr2 103407207 103407506 -147280348 - AluSx SINE Alu -6 306 1 301 333 56 49 chr2 103407679 103407823 -147280031 - MER91A DNA MER1_type -14 182 38 348 204 222 9 chr2 103409055 103409163 -147278691 - MER94 DNA DNA -3 131 1 329 353 122 28 chr2 103409293 103409579 -147278275 + L1MD2 LINE L1 27 339 -6201 247 269 0 0 chr2 103410189 103410256 -147277598 + L1MD2 LINE L1 997 1063 -5477 332 322 42 21 chr2 103410257 103410494 -147277360 + L1MD2 LINE L1 2189 2399 -4141 1434 212 54 0 chr2 103410496 103410850 -147277004 + L1MB1 LINE L1 5796 6168 0 532 214 34 0 chr2 103410857 103411036 -147276818 + L1MD2 LINE L1 2407 2591 -3949 326 207 46 17 chr2 103411301 103411475 -147276379 + (TA)n Simple_repeat Simple_repeat 2 180 0 1780 171 3 17 chr2 103411484 103411777 -147276077 - AluJb SINE Alu -23 289 1 7251 253 47 29 chr2 103411777 103412057 -147275797 + L1MD2 LINE L1 2718 2992 -3761 2248 100 3 3 chr2 103412057 103412357 -147275497 + AluSg SINE Alu 1 300 -10 7251 253 47 29 chr2 103412357 103414149 -147273705 + L1MD2 LINE L1 2992 4752 -2001 937 102 23 17 chr2 103414149 103414325 -147273529 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 207 0 0 0 chr2 103414325 103414348 -147273506 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 7251 253 47 29 chr2 103414348 103415649 -147272205 + L1MD2 LINE L1 4751 6150 -603 264 288 0 42 chr2 103415667 103415785 -147272069 - LTR41 LTR ERVL -12 761 649 424 269 97 6 chr2 103416271 103416446 -147271408 - LTR41 LTR ERVL -578 195 5 902 212 59 0 chr2 103416468 103416704 -147271150 + L1MD2 LINE L1 6151 6400 -353 346 238 86 9 chr2 103417895 103418000 -147269854 + MLT1J2 LTR MaLR 1 113 -337 2308 103 3 3 chr2 103418630 103418940 -147268914 - AluSg SINE Alu 0 310 1 1368 203 7 68 chr2 103419766 103420076 -147267778 - AluJo SINE Alu -17 295 5 1402 188 27 92 chr2 103420991 103421405 -147266449 + MLT1B LTR MaLR 4 390 0 231 36 0 0 chr2 103422331 103422359 -147265495 + (CAT)n Simple_repeat Simple_repeat 1 28 0 259 167 37 19 chr2 103422362 103422416 -147265438 - MIR SINE MIR -129 133 79 1952 221 65 30 chr2 103423717 103424409 -147263445 - L1M4 LINE L1 -1634 5323 4608 675 217 40 44 chr2 103424425 103424651 -147263203 - L1M4 LINE L1 -3704 3253 3029 4039 236 88 53 chr2 103424652 103425981 -147261873 - L1M4 LINE L1 -5472 1387 12 271 323 101 66 chr2 103426319 103426517 -147261337 - MIR3 SINE MIR -3 205 1 432 0 0 0 chr2 103426843 103426891 -147260963 + (TG)n Simple_repeat Simple_repeat 2 49 0 450 273 159 0 chr2 103427085 103427261 -147260593 - MIR SINE MIR 0 262 59 349 244 113 0 chr2 103427585 103427700 -147260154 - MER94 DNA DNA -6 128 1 195 268 0 0 chr2 103430397 103430438 -147257416 - L2 LINE L2 -17 3296 3256 511 214 6 17 chr2 103431297 103431470 -147256384 + GA-rich Low_complexity Low_complexity 4 174 0 202 382 75 38 chr2 103432052 103432371 -147255483 - L2 LINE L2 -1 3271 2941 627 105 0 0 chr2 103434994 103435080 -147252774 - AluSp/q SINE Alu -10 303 218 299 293 39 70 chr2 103435089 103435349 -147252505 - L1MC/D LINE L1 -313 5808 5573 2662 198 20 0 chr2 103435349 103435858 -147251996 - LTR53 LTR ERVL 0 519 1 299 293 39 70 chr2 103435858 103436013 -147251841 - L1MC/D LINE L1 -548 5573 5415 453 126 0 78 chr2 103436091 103436194 -147251660 - MER53 DNA DNA 0 189 95 418 278 89 24 chr2 103436817 103436986 -147250868 + MER5A DNA MER1_type 7 186 -3 333 227 9 45 chr2 103438327 103438437 -147249417 + L1MA9 LINE L1 6133 6238 -74 229 65 0 0 chr2 103438437 103438483 -147249371 - LTR66 LTR ERVL -171 439 394 190 191 15 15 chr2 103438486 103438554 -147249300 + (TA)n Simple_repeat Simple_repeat 2 69 0 284 64 56 19 chr2 103438565 103438626 -147249228 + L1MA9 LINE L1 6224 6291 0 229 286 16 32 chr2 103438772 103438889 -147248965 - MIR SINE MIR -61 147 34 311 289 132 31 chr2 103439026 103439185 -147248669 + MIR SINE MIR 84 258 -4 211 319 0 29 chr2 103439429 103439498 -147248356 - MIR SINE MIR -193 69 3 318 299 29 36 chr2 103439699 103439836 -147248018 + MIR SINE MIR 1 136 -126 662 267 129 5 chr2 103440758 103440968 -147246886 + MIR SINE MIR 3 238 -24 438 268 147 0 chr2 103441286 103441443 -147246411 + MIR SINE MIR 72 251 -11 252 0 0 0 chr2 103441812 103441840 -147246014 + (TG)n Simple_repeat Simple_repeat 2 29 0 2477 67 3 0 chr2 103443182 103443480 -147244374 - AluY SINE Alu -12 299 1 192 77 0 0 chr2 103443557 103443583 -147244271 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 274 340 35 45 chr2 103443909 103444109 -147243745 - L2 LINE L2 -919 2395 2198 1872 189 12 57 chr2 103444875 103445282 -147242572 - MLT1B LTR MaLR 0 390 2 752 291 37 41 chr2 103445399 103445670 -147242184 - MLT1I LTR MaLR -8 401 132 421 252 70 9 chr2 103445733 103445848 -147242006 - MLT1I LTR MaLR -287 122 1 261 0 0 0 chr2 103445951 103445980 -147241874 + (T)n Simple_repeat Simple_repeat 1 29 0 2511 104 6 4 chr2 103445980 103446328 -147241526 - THE1B LTR MaLR -12 445 3 10841 109 30 46 chr2 103446330 103447935 -147239919 - THE1B-int LTR MaLR 0 1580 1 2638 124 6 6 chr2 103447935 103448299 -147239555 - THE1B LTR MaLR 0 364 1 2192 272 46 12 chr2 103448870 103449876 -147237978 + L1ME1 LINE L1 1973 2974 -3241 2899 235 48 49 chr2 103449888 103451051 -147236803 + L1ME1 LINE L1 4447 5609 -626 1856 181 53 99 chr2 103451051 103451525 -147236329 - LTR47A LTR ERVL 0 452 1 2899 235 48 49 chr2 103451525 103451552 -147236302 + L1ME1 LINE L1 5609 5635 -600 1969 140 3 32 chr2 103451552 103451866 -147235988 - AluSx SINE Alu -7 305 1 2899 235 48 49 chr2 103451866 103452463 -147235391 + L1ME1 LINE L1 5635 6230 -5 768 313 56 9 chr2 103453506 103453829 -147234025 - LTR16B LTR ERVL -2 462 125 335 60 20 0 chr2 103453902 103453952 -147233902 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 238 161 54 0 chr2 103454153 103454246 -147233608 + (TG)n Simple_repeat Simple_repeat 2 99 0 1434 265 45 9 chr2 103454637 103455083 -147232771 + MLT1C LTR MaLR 6 467 0 2215 108 3 16 chr2 103455592 103455759 -147232095 - AluSq SINE Alu -12 301 138 1864 142 3 11 chr2 103455759 103456041 -147231813 - AluSx SINE Alu -19 293 14 2215 108 3 16 chr2 103456041 103456178 -147231676 - AluSq SINE Alu -175 138 1 303 284 194 31 chr2 103457039 103457261 -147230593 - LTR41 LTR ERVL -6 767 510 464 189 58 100 chr2 103457635 103457825 -147230029 - LTR41 LTR ERVL -590 183 2 2200 64 0 0 chr2 103458684 103458951 -147228903 - AluY SINE Alu -10 301 35 182 270 0 0 chr2 103461195 103461232 -147226622 + MIR SINE MIR 61 97 -165 278 262 67 67 chr2 103461457 103461606 -147226248 - MIR3 SINE MIR -45 163 15 420 363 24 14 chr2 103461621 103461833 -147226021 - MIR SINE MIR 0 262 49 1817 186 126 45 chr2 103463685 103464152 -147223702 - MLT1D LTR MaLR 0 505 1 837 234 14 116 chr2 103464153 103464610 -147223244 - MLT1D-int LTR MaLR -1 1734 955 252 121 2 84 chr2 103464772 103464847 -147223007 - MLT2C1 LTR ERVL 0 663 452 225 173 39 0 chr2 103464884 103464936 -147222918 + L1MC4 LINE L1 6614 6667 -1375 1229 222 39 51 chr2 103464939 103465295 -147222559 - MLT2C1 LTR ERVL -45 352 1 318 333 127 24 chr2 103465526 103465778 -147222076 + L3 LINE CR1 1298 1575 -2 31 0 0 0 chr2 103466103 103466134 -147221720 + AT_rich Low_complexity Low_complexity 1 31 0 36 40 0 0 chr2 103466461 103466511 -147221343 + AT_rich Low_complexity Low_complexity 1 50 0 385 324 209 22 chr2 103466971 103467335 -147220519 + L3 LINE CR1 1116 1547 -30 21 0 0 0 chr2 103468524 103468545 -147219309 + AT_rich Low_complexity Low_complexity 1 21 0 758 229 16 10 chr2 103470209 103470401 -147217453 - MER96B DNA MER1_type? -182 235 43 35 41 0 0 chr2 103471477 103471526 -147216328 + AT_rich Low_complexity Low_complexity 1 49 0 1493 164 51 10 chr2 103472079 103472372 -147215482 + L1MA4 LINE L1 5991 6295 -5 216 0 0 0 chr2 103473493 103473517 -147214337 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 474 237 213 16 chr2 103473982 103474235 -147213619 + MER5C DNA MER1_type 2 304 -20 314 275 87 36 chr2 103475356 103475494 -147212360 - MIR3 SINE MIR -43 165 21 198 377 164 19 chr2 103476893 103477052 -147210802 - L2 LINE L2 -1 3271 3090 1542 279 140 21 chr2 103477266 103477597 -147210257 - Charlie7 DNA MER1_type -1813 799 509 1534 197 3 37 chr2 103477597 103477897 -147209957 - AluJb SINE Alu -12 300 11 1542 279 140 21 chr2 103477897 103478264 -147209590 - Charlie7 DNA MER1_type -2103 509 18 307 303 131 67 chr2 103478406 103478766 -147209088 + L2 LINE L2 2855 3237 -35 315 85 0 0 chr2 103479190 103479237 -147208617 + (TG)n Simple_repeat Simple_repeat 2 48 0 222 360 51 29 chr2 103479389 103479564 -147208290 + MIR3 SINE MIR 7 185 -23 2237 79 0 14 chr2 103480531 103480821 -147207033 - AluSx SINE Alu -26 286 1 444 219 70 16 chr2 103481009 103481137 -147206717 - MER58 DNA MER1_type -16 2404 2270 * 803 218 18 0 chr2 103481135 103481305 -147206549 - MER58 DNA MER1_type -2237 183 11 647 275 65 79 chr2 103481934 103482615 -147205239 - L1MC4a LINE L1 -1883 5925 5255 2219 108 3 0 chr2 103482645 103482941 -147204913 - AluSx SINE Alu -15 297 1 30 27 0 0 chr2 103483038 103483075 -147204779 + AT_rich Low_complexity Low_complexity 1 37 0 745 158 9 0 chr2 103483082 103483196 -147204658 - FLAM_C SINE Alu -16 117 3 229 313 39 0 chr2 103483280 103483408 -147204446 + L1M4 LINE L1 3731 3863 -2283 210 281 31 0 chr2 103483665 103483729 -147204125 + MIR SINE MIR 197 262 0 857 82 6 119 chr2 103484605 103484764 -147203090 + L1MB3 LINE L1 6042 6182 -1 1460 73 0 0 chr2 103485693 103485872 -147201982 - AluY SINE Alu -9 302 124 464 360 54 0 chr2 103486147 103486369 -147201485 + MIR SINE MIR 15 248 -14 231 333 28 0 chr2 103487698 103487770 -147200084 - MIR3 SINE MIR -23 185 112 225 0 0 0 chr2 103488119 103488144 -147199710 + (TTA)n Simple_repeat Simple_repeat 3 27 0 5934 16 0 0 chr2 103488144 103488816 -147199038 - L1PA3 LINE L1 -18 6137 5466 2892 29 0 0 chr2 103488816 103489274 -147198580 + L1PA3 LINE L1 5022 5479 -676 203 341 0 11 chr2 103489857 103489945 -147197909 - MIR3 SINE MIR -14 194 108 1911 142 30 3 chr2 103490295 103490597 -147197257 - AluSq SINE Alu -3 310 1 537 279 19 42 chr2 103492156 103492371 -147195483 + MIR SINE MIR 53 262 0 26 0 0 0 chr2 103493125 103493151 -147194703 + AT_rich Low_complexity Low_complexity 1 26 0 344 231 64 29 chr2 103493616 103493791 -147194063 - MIR SINE MIR 0 262 37 2560 47 0 0 chr2 103494292 103494593 -147193261 - AluY SINE Alu -10 301 1 641 244 87 35 chr2 103494665 103494894 -147192960 - MIR SINE MIR -17 245 5 24 32 0 0 chr2 103495159 103495190 -147192664 + AT_rich Low_complexity Low_complexity 1 31 0 213 289 134 54 chr2 103496466 103496615 -147191239 + MIR SINE MIR 32 192 -70 269 275 73 55 chr2 103496713 103496822 -147191032 + MIR SINE MIR 13 123 -139 214 254 18 18 chr2 103496809 103496864 -147190990 + L2 LINE L2 3205 3259 -13 * 2479 130 71 24 chr2 103496907 103497370 -147190484 - MER31A LTR ERV1 0 485 1 1207 209 48 9 chr2 103497403 103497733 -147190121 - LTR37A LTR ERV1 0 426 84 288 263 0 63 chr2 103498275 103498370 -147189484 + MIR SINE MIR 72 160 -102 234 128 0 0 chr2 103498503 103498542 -147189312 + (GA)n Simple_repeat Simple_repeat 2 40 0 466 259 27 27 chr2 103499240 103499460 -147188394 - L1MC5 LINE L1 -36 7925 7706 372 278 36 26 chr2 103499911 103500105 -147187749 - L1ME3A LINE L1 -223 5947 5752 21 36 0 0 chr2 103500370 103500398 -147187456 + AT_rich Low_complexity Low_complexity 1 28 0 595 280 91 18 chr2 103500425 103500854 -147187000 + L1M4 LINE L1 4562 5019 -1127 2424 49 0 0 chr2 103500990 103501298 -147186556 + AluY SINE Alu 1 308 0 300 320 25 44 chr2 103501969 103502172 -147185682 - LTR67 LTR ERVL -6 551 353 1113 311 28 12 chr2 103502469 103502695 -147185159 - LTR16B LTR ERVL 0 464 226 378 0 0 0 chr2 103502695 103502737 -147185117 + (TG)n Simple_repeat Simple_repeat 2 43 0 1113 311 28 12 chr2 103502737 103502934 -147184920 - LTR16B LTR ERVL -238 226 34 566 339 51 22 chr2 103503283 103503596 -147184258 - ERVL LTR ERVL -939 4825 4504 2439 233 50 32 chr2 103503642 103504309 -147183545 + L1M4c LINE L1 906 1594 -4790 2166 94 24 0 chr2 103504309 103504596 -147183258 + AluSp SINE Alu 1 294 -19 2439 233 50 32 chr2 103504596 103504804 -147183050 + L1M4c LINE L1 1594 1797 -4587 1510 206 118 18 chr2 103505666 103506122 -147181732 + MLT1D LTR MaLR 4 505 0 225 225 155 0 chr2 103506220 103506291 -147181563 + MLT2C1 LTR ERVL 118 199 -198 * 1751 223 59 27 chr2 103506241 103506716 -147181138 + MLT1E2 LTR MaLR 137 626 0 2189 103 3 3 chr2 103506729 103507021 -147180833 - AluSg1 SINE Alu -17 292 1 371 295 36 0 chr2 103507056 103507168 -147180686 - ERVL LTR ERVL -2307 3457 3342 314 398 47 4 chr2 103507205 103507459 -147180395 - ERVL LTR ERVL -2474 3290 3026 529 304 83 4 chr2 103508031 103508261 -147179593 - LTR33 LTR ERVL -228 293 46 243 339 97 38 chr2 103508753 103509178 -147178676 + LTR16A1 LTR ERVL 1 450 -7 306 284 16 31 chr2 103509186 103509313 -147178541 + ERVL LTR ERVL 2505 2629 -3135 1132 155 52 40 chr2 103509340 103509591 -147178263 - Tigger2 DNA MER2_type -13 2705 2452 4143 151 25 3 chr2 103509646 103510376 -147177478 - Tigger2 DNA MER2_type -1972 746 1 325 331 31 18 chr2 103510650 103510813 -147177041 - LTR33 LTR ERVL -8 513 349 1440 329 67 28 chr2 103510845 103511290 -147176564 - ERVL LTR ERVL -2198 3566 3140 1358 167 11 7 chr2 103511290 103511559 -147176295 + L1MA4 LINE L1 6022 6291 -9 1440 329 67 28 chr2 103511559 103512837 -147175017 - ERVL LTR ERVL -2624 3140 1705 1907 113 4 4 chr2 103512892 103513158 -147174696 + AluSx SINE Alu 39 304 -8 2099 185 18 42 chr2 103513158 103513607 -147174247 + MLT1D LTR MaLR 34 471 -34 920 277 54 27 chr2 103513624 103514032 -147173822 - ERVL LTR ERVL -4539 457 39 894 281 99 40 chr2 103514066 103514439 -147173415 - LTR16A LTR ERVL 0 457 63 659 310 56 25 chr2 103514495 103515127 -147172727 - ERVL LTR ERVL -3333 2431 1720 228 335 67 17 chr2 103516673 103516852 -147171002 - LTR67 LTR ERVL -10 547 360 2625 103 5 13 chr2 103517168 103517545 -147170309 - THE1C LTR MaLR -1 374 1 206 377 31 31 chr2 103517708 103517867 -147169987 + L2 LINE L2 3151 3309 -4 226 290 16 16 chr2 103517939 103518001 -147169853 + L2 LINE L2 3232 3293 -20 669 326 22 13 chr2 103518096 103518320 -147169534 + MIR SINE MIR 17 242 -20 242 319 83 108 chr2 103518382 103518586 -147169268 + L2 LINE L2 3047 3245 -27 392 266 157 65 chr2 103519222 103519271 -147168583 + MIR SINE MIR 3 46 -216 2283 104 3 0 chr2 103519271 103519580 -147168274 - AluSp SINE Alu -3 310 1 392 266 157 65 chr2 103519580 103519759 -147168095 + MIR SINE MIR 46 252 -10 1783 263 29 31 chr2 103520181 103520962 -147166892 - L1MDb LINE L1 -1271 5135 4356 41200 30 21 1 chr2 103520989 103527019 -147160835 - L1HS LINE L1 -1 6154 1 1587 278 32 21 chr2 103527041 103527751 -147160103 - L1MDb LINE L1 -2099 4307 3590 6267 239 70 45 chr2 103527797 103531225 -147156629 - L1MA5 LINE L1 0 6886 3545 2037 148 0 0 chr2 103531225 103531516 -147156338 - AluSx SINE Alu -21 291 1 6267 239 70 45 chr2 103531516 103533792 -147154062 - L1MA5 LINE L1 -3341 3545 1427 469 110 30 30 chr2 103533792 103533892 -147153962 - L1MA4A LINE L1 0 6303 6204 6267 239 70 45 chr2 103533892 103535125 -147152729 - L1MA5 LINE L1 -5459 1427 226 5923 54 6 1 chr2 103535144 103536113 -147151741 - L1PA6 LINE L1 -120 6034 5064 959 49 0 0 chr2 103536113 103536234 -147151620 + L1PA5 LINE L1 6032 6153 -1 597 244 24 62 chr2 103536276 103536485 -147151369 - L1MA5 LINE L1 -6451 202 2 342 304 33 17 chr2 103536598 103536779 -147151075 - L1M3d LINE L1 -5706 185 2 2672 249 81 9 chr2 103536788 103538030 -147149824 - L1MDb LINE L1 -2883 3523 2211 192 77 0 0 chr2 103538102 103538128 -147149726 + (CA)n Simple_repeat Simple_repeat 2 27 0 816 270 38 14 chr2 103538194 103538611 -147149243 - L1MDb LINE L1 -4780 1807 1340 21 0 0 0 chr2 103538869 103538890 -147148964 + AT_rich Low_complexity Low_complexity 1 21 0 1690 133 56 12 chr2 103542071 103542256 -147145598 + L1MA3 LINE L1 5954 6129 -176 1978 156 0 0 chr2 103542256 103542576 -147145278 + AluSx SINE Alu 1 320 0 1690 133 56 12 chr2 103542576 103542726 -147145128 + L1MA3 LINE L1 6129 6305 0 270 285 32 81 chr2 103542742 103542865 -147144989 - MER5A DNA MER1_type -28 161 45 210 211 96 128 chr2 103544017 103544173 -147143681 + MIR SINE MIR 112 262 0 * 316 394 148 0 chr2 103544159 103544469 -147143385 + L2 LINE L2 2916 3271 -1 23 33 0 0 chr2 103545394 103545424 -147142430 + AT_rich Low_complexity Low_complexity 1 30 0 461 350 74 28 chr2 103545737 103546020 -147141834 - L1ME LINE L1 -504 5617 5322 521 210 114 54 chr2 103546720 103546887 -147140967 - MER5B DNA MER1_type 0 178 2 299 250 95 12 chr2 103547283 103547367 -147140487 + L2 LINE L2 3182 3272 0 772 169 0 0 chr2 103547771 103547895 -147139959 - FLAM_C SINE Alu -19 124 1 391 130 24 3 chr2 103549279 103549407 -147138447 - MER53 DNA DNA -19 170 2 215 169 70 14 chr2 103549986 103550057 -147137797 + (TTAA)n Simple_repeat Simple_repeat 4 78 0 297 294 46 61 chr2 103550544 103550890 -147136964 - L1ME LINE L1 -340 5781 5440 1960 133 17 3 chr2 103550890 103551183 -147136671 - AluSx SINE Alu -15 297 1 297 294 46 61 chr2 103551183 103551231 -147136623 - L1ME LINE L1 -681 5440 5393 2166 123 3 13 chr2 103552072 103552382 -147135472 + AluSg SINE Alu 1 307 -3 311 103 0 17 chr2 103552993 103553051 -147134803 + (TC)n Simple_repeat Simple_repeat 2 58 0 2856 199 58 41 chr2 103553090 103554010 -147133844 - L1ME2 LINE L1 -11 6153 5217 308 202 124 0 chr2 103554130 103554219 -147133635 - MLT1H LTR MaLR -15 534 435 698 263 23 50 chr2 103554224 103554524 -147133330 - MLT1H LTR MaLR -227 322 31 330 316 20 0 chr2 103554712 103554810 -147133044 - L2 LINE L2 0 3313 3214 377 332 121 0 chr2 103555167 103555390 -147132464 - L2 LINE L2 -667 2647 2398 4677 170 12 22 chr2 103555461 103555835 -147132019 - L1MB1 LINE L1 -1 6167 5791 1291 147 67 101 chr2 103555835 103556222 -147131632 - THE1C LTR MaLR 0 375 2 4677 170 12 22 chr2 103556222 103557077 -147130777 - L1MB1 LINE L1 -377 5791 4948 375 323 101 57 chr2 103557078 103557394 -147130460 - L2 LINE L2 -962 2352 2023 343 352 103 50 chr2 103557398 103557765 -147130089 - L2 LINE L2 -1671 1643 1236 221 53 53 0 chr2 103557765 103557803 -147130051 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 343 352 103 50 chr2 103557803 103557989 -147129865 - L2 LINE L2 -2078 1236 1061 2149 108 0 17 chr2 103560028 103560325 -147127529 - AluSq SINE Alu -21 292 1 2201 94 17 0 chr2 103560544 103560832 -147127022 - AluSx SINE Alu -18 294 2 2125 128 7 0 chr2 103561634 103561930 -147125924 + AluSg SINE Alu 1 298 -12 1801 151 116 40 chr2 103562082 103562480 -147125374 + MSTA LTR MaLR 1 428 0 206 200 44 0 chr2 103562723 103562768 -147125086 - L2 LINE L2 -16 3297 3251 24 32 0 0 chr2 103563338 103563369 -147124485 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 103564671 103564699 -147123155 + AT_rich Low_complexity Low_complexity 1 28 0 3349 308 79 7 chr2 103564701 103565480 -147122374 + L2 LINE L2 846 1750 -1564 2117 144 0 0 chr2 103565480 103565779 -147122075 - AluSx SINE Alu -13 299 1 3349 308 79 7 chr2 103565779 103566254 -147121600 + L2 LINE L2 1750 2190 -1124 353 241 101 58 chr2 103566346 103566634 -147121220 + MLT1J1 LTR MaLR 59 393 -53 1865 260 33 57 chr2 103566700 103567331 -147120523 + L2 LINE L2 2196 2811 -503 225 348 58 14 chr2 103567441 103567579 -147120275 + MIR SINE MIR 35 178 -84 390 212 0 0 chr2 103567624 103567723 -147120131 + (CAT)n Simple_repeat Simple_repeat 1 99 0 707 319 68 4 chr2 103567743 103567978 -147119876 + MIR SINE MIR 5 254 -8 1590 233 110 24 chr2 103567988 103568581 -147119273 + LTR48B LTR ERV1 1 644 0 222 37 0 0 chr2 103568734 103568761 -147119093 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 183 265 20 0 chr2 103569404 103569453 -147118401 + L2 LINE L2 3264 3313 0 379 171 11 23 chr2 103569508 103569596 -147118258 + LTR48B LTR ERV1 400 486 -158 663 161 15 77 chr2 103569957 103570087 -147117767 + FLAM_A SINE Alu 1 122 -11 375 328 82 0 chr2 103571544 103571666 -147116188 - L2 LINE L2 0 3272 3141 308 316 48 72 chr2 103572425 103572634 -147115220 + MIR SINE MIR 46 249 -13 328 292 144 78 chr2 103573751 103574658 -147113196 - L1M2 LINE L1 -5472 1377 530 1446 153 22 65 chr2 103575391 103575522 -147112332 + AluJo SINE Alu 1 136 -176 1881 82 67 11 chr2 103575522 103575790 -147112064 + AluSg SINE Alu 1 283 -27 219 69 0 0 chr2 103575790 103575819 -147112035 + (TTAA)n Simple_repeat Simple_repeat 2 30 0 1446 153 22 65 chr2 103575819 103576007 -147111847 + AluJo SINE Alu 134 307 -5 22 35 0 0 chr2 103576120 103576149 -147111705 + AT_rich Low_complexity Low_complexity 1 29 0 309 337 85 52 chr2 103576277 103576547 -147111307 - L2 LINE L2 -77 3195 2917 259 239 28 28 chr2 103577302 103577373 -147110481 + MIR SINE MIR 175 245 -17 23 33 0 0 chr2 103578541 103578571 -147109283 + AT_rich Low_complexity Low_complexity 1 30 0 243 125 0 0 chr2 103578746 103578786 -147109068 + (ATG)n Simple_repeat Simple_repeat 3 42 0 25 31 0 0 chr2 103579407 103579439 -147108415 + AT_rich Low_complexity Low_complexity 1 32 0 6229 39 1 0 chr2 103579959 103580704 -147107150 - L1PA5 LINE L1 -4 6150 5405 5779 42 0 0 chr2 103580704 103581485 -147106369 + L1P LINE L1 4640 5420 -734 1332 202 23 30 chr2 103581637 103581764 -147106090 + AluJo SINE Alu 1 127 -185 294 29 0 0 chr2 103581764 103581799 -147106055 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1332 202 23 30 chr2 103581799 103581973 -147105881 + AluJo SINE Alu 127 300 -12 606 301 173 5 chr2 103582064 103582433 -147105421 - L1MEc LINE L1 -2668 3461 3031 23 33 0 0 chr2 103582495 103582525 -147105329 + AT_rich Low_complexity Low_complexity 1 30 0 898 290 62 77 chr2 103583152 103583361 -147104493 - L1MEc LINE L1 -3119 3010 2799 692 210 0 0 chr2 103583361 103583480 -147104374 - FLAM_A SINE Alu -13 120 2 898 290 62 77 chr2 103583480 103583981 -147103873 - L1MEc LINE L1 -3330 2799 2311 512 275 22 63 chr2 103584399 103584621 -147103233 + MIR SINE MIR 37 249 -13 343 362 96 3 chr2 103584917 103585199 -147102655 - L1MEc LINE L1 -4727 1583 1276 308 270 35 65 chr2 103585202 103585636 -147102218 - L1MEc LINE L1 -5023 1096 676 341 367 69 52 chr2 103585681 103586202 -147101652 - L1MEc LINE L1 -5487 632 103 236 257 59 40 chr2 103586504 103586605 -147101249 + MIR SINE MIR 19 121 -87 1095 139 0 0 chr2 103586630 103586810 -147101044 + (TA)n Simple_repeat Simple_repeat 1 180 0 283 60 40 0 chr2 103586839 103586889 -147100965 + (TA)n Simple_repeat Simple_repeat 2 53 0 676 256 32 37 chr2 103587723 103587945 -147099909 - MIR SINE MIR 0 262 43 201 295 0 16 chr2 103588536 103588597 -147099257 + (CA)n Simple_repeat Simple_repeat 1 60 0 401 261 144 0 chr2 103588604 103588715 -147099139 + L2 LINE L2 3187 3313 0 246 308 23 45 chr2 103588770 103588903 -147098951 - MER94 DNA DNA 0 134 5 595 238 50 6 chr2 103588955 103589115 -147098739 + MIR SINE MIR 46 212 -50 189 154 0 0 chr2 103590515 103590554 -147097300 + T-rich Low_complexity Low_complexity 1 39 0 335 294 100 31 chr2 103592658 103592818 -147095036 - Charlie8 DNA MER1_type -2246 171 1 588 158 0 0 chr2 103593348 103593430 -147094424 + AluJ/FLAM SINE Alu 3 84 -228 1774 192 0 0 chr2 103593537 103593829 -147094025 + AluJo SINE Alu 3 294 -18 293 355 46 28 chr2 103593996 103594213 -147093641 + Tigger8 DNA MER2_type 16 236 -430 1344 193 0 0 chr2 103594214 103594457 -147093397 - L1MB3 LINE L1 -56 6127 5885 2567 246 92 8 chr2 103594870 103595594 -147092260 - MER21B LTR ERV1 -60 803 19 461 218 0 0 chr2 103595614 103595692 -147092162 - MER21B LTR ERV1 -774 89 12 377 362 57 74 chr2 103596072 103596423 -147091431 + L2 LINE L2 2915 3259 -13 2128 60 0 0 chr2 103596428 103596701 -147091153 + L1PA6 LINE L1 5889 6161 0 2214 192 49 101 chr2 103596935 103597695 -147090159 - L1M4 LINE L1 -2126 4020 3301 2316 239 78 0 chr2 103597818 103598367 -147089487 - L1MDa LINE L1 -5932 608 17 734 126 0 34 chr2 103598397 103598516 -147089338 - 7SLRNA srpRNA srpRNA -1 319 205 30409 107 18 14 chr2 103598686 103601402 -147086452 + L1PA8 LINE L1 11 2715 -3772 198 0 0 0 chr2 103601402 103601424 -147086430 + (TA)n Simple_repeat Simple_repeat 2 23 0 30409 107 18 14 chr2 103601424 103605134 -147082720 + L1PA8 LINE L1 2715 6483 -4 858 291 138 34 chr2 103605584 103606401 -147081453 + L2 LINE L2 2359 3257 -56 210 37 0 0 chr2 103606564 103606591 -147081263 + (TTG)n Simple_repeat Simple_repeat 2 28 0 256 218 39 26 chr2 103607261 103607339 -147080515 + MER58 DNA MER1_type 2342 2420 0 273 26 0 0 chr2 103608832 103608871 -147078983 - AluY SINE Alu 0 301 263 3523 126 128 69 chr2 103609290 103609865 -147077989 - Tigger3(Golem) DNA MER2_type -1 3028 2402 1724 117 0 0 chr2 103609865 103610087 -147077767 - AluSq SINE Alu -91 222 1 3523 126 128 69 chr2 103610087 103610220 -147077634 - Tigger3(Golem) DNA MER2_type -627 2402 2278 657 173 10 0 chr2 103610214 103610318 -147077536 - Tigger3(Golem) DNA MER2_type -2924 105 1 * 868 171 123 126 chr2 103610348 103610698 -147077156 - MLT1A1 LTR MaLR 0 365 17 269 241 7 92 chr2 103611386 103611527 -147076327 + MIR SINE MIR 88 216 -46 2199 114 0 3 chr2 103611558 103611868 -147075986 + AluSx SINE Alu 3 311 0 457 143 7 204 chr2 103612787 103612934 -147074920 + MER45A DNA AcHobo 58 175 -3 1715 141 0 72 chr2 103613770 103614099 -147073755 + AluSx SINE Alu 1 307 0 203 349 15 0 chr2 103618232 103618298 -147069556 + MIR SINE MIR 35 101 -107 2076 107 27 20 chr2 103618627 103618925 -147068929 + AluSx SINE Alu 1 300 -12 303 28 0 0 chr2 103619079 103619115 -147068739 + (CA)n Simple_repeat Simple_repeat 1 36 0 2548 71 0 0 chr2 103620126 103620435 -147067419 + AluY SINE Alu 1 309 -2 325 280 154 6 chr2 103620632 103620814 -147067040 - MARNA DNA Mariner -108 478 270 2368 73 0 7 chr2 103620828 103621130 -147066724 - AluY SINE Alu -11 300 1 2070 125 3 22 chr2 103622421 103622732 -147065122 + AluSg SINE Alu 1 305 -5 232 244 0 0 chr2 103624067 103624112 -147063742 + (TG)n Simple_repeat Simple_repeat 2 46 0 2218 64 64 14 chr2 103624654 103624949 -147062905 - AluY SINE Alu -1 310 1 207 0 0 0 chr2 103625233 103625256 -147062598 + (A)n Simple_repeat Simple_repeat 1 23 0 189 0 0 0 chr2 103625483 103625504 -147062350 + (T)n Simple_repeat Simple_repeat 1 21 0 1088 202 56 65 chr2 103626366 103626457 -147061397 + MER33 DNA MER1_type 6 96 -2489 2156 125 0 10 chr2 103626457 103626768 -147061086 + AluSx SINE Alu 1 308 -4 1088 202 56 65 chr2 103626768 103626998 -147060856 + MER33 DNA MER1_type 96 324 0 2201 103 0 10 chr2 103628422 103628722 -147059132 - AluY SINE Alu -14 297 1 22 0 0 0 chr2 103628730 103628752 -147059102 + AT_rich Low_complexity Low_complexity 1 22 0 354 304 51 22 chr2 103630522 103630660 -147057194 - MER5A DNA MER1_type -5 184 43 240 325 241 0 chr2 103632316 103632399 -147055455 - L2 LINE L2 -36 3236 3134 433 388 69 20 chr2 103632510 103632917 -147054937 + L2 LINE L2 2836 3262 -10 2348 75 10 0 chr2 103634019 103634311 -147053543 - AluY SINE Alu -16 295 1 2273 174 81 23 chr2 103635282 103635753 -147052101 + MLT1D LTR MaLR 8 505 0 762 151 34 0 chr2 103635885 103636004 -147051850 - FLAM_C SINE Alu -19 124 2 537 332 96 5 chr2 103636006 103636226 -147051628 + MIR SINE MIR 23 262 0 263 231 125 10 chr2 103637189 103637293 -147050561 + MER103 DNA DNA 4 119 -47 342 271 6 11 chr2 103638248 103638429 -147049425 + CT-rich Low_complexity Low_complexity 1 180 0 2252 264 92 34 chr2 103639491 103640707 -147047147 - L2 LINE L2 -4 3309 2019 548 259 11 98 chr2 103640739 103640960 -147046894 - MIR SINE MIR -20 242 37 211 294 88 69 chr2 103641196 103641356 -147046498 - L2 LINE L2 -696 2618 2456 245 259 0 0 chr2 103641917 103641971 -147045883 + (CA)n Simple_repeat Simple_repeat 2 55 0 2039 134 0 10 chr2 103642417 103642715 -147045139 - AluSx SINE Alu -17 295 1 219 143 0 0 chr2 103642926 103642971 -147044883 + MIR SINE MIR 106 142 -66 2254 93 0 0 chr2 103643081 103643392 -147044462 + AluSc SINE Alu 1 311 0 1282 222 125 43 chr2 103643651 103644074 -147043780 - LTR40c LTR ERVL -7 458 1 1552 284 92 59 chr2 103644354 103645271 -147042583 - L2 LINE L2 -823 2491 1545 365 331 97 15 chr2 103647278 103647547 -147040307 - L1M4 LINE L1 -1424 4722 4432 209 263 51 13 chr2 103647559 103647715 -147040139 + (TA)n Simple_repeat Simple_repeat 1 162 0 370 314 46 16 chr2 103647969 103648161 -147039693 - L1M4 LINE L1 -2008 4138 3957 180 333 49 49 chr2 103648438 103648519 -147039335 + L2 LINE L2 3191 3271 -1 213 39 0 0 chr2 103648594 103648620 -147039234 + (TTA)n Simple_repeat Simple_repeat 2 27 0 812 182 0 0 chr2 103648620 103648741 -147039113 - AluSq/x SINE Alu -190 122 2 50 51 0 0 chr2 103648940 103649018 -147038836 + AT_rich Low_complexity Low_complexity 1 78 0 598 306 101 64 chr2 103649869 103650304 -147037550 - MLT1J LTR MaLR -9 502 52 403 0 75 0 chr2 103650392 103650459 -147037395 + (TA)n Simple_repeat Simple_repeat 1 72 0 641 275 93 5 chr2 103650710 103650903 -147036951 - MER63A DNA MER1_type 0 210 1 253 305 131 67 chr2 103653088 103653554 -147034300 - MLT1H LTR MaLR -13 536 41 2624 276 148 13 chr2 103653592 103654288 -147033566 - L2 LINE L2 -47 3266 2665 2088 146 24 78 chr2 103654288 103654699 -147033155 - MLT1B LTR MaLR -1 389 1 2624 276 148 13 chr2 103654699 103655343 -147032511 - L2 LINE L2 -648 2665 1747 242 179 60 15 chr2 103655451 103655518 -147032336 - L1MCa LINE L1 -4362 2064 1995 204 250 19 0 chr2 103655518 103655570 -147032284 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 31 0 0 0 chr2 103655931 103655962 -147031892 + AT_rich Low_complexity Low_complexity 1 31 0 471 95 0 0 chr2 103655962 103656025 -147031829 - Alu SINE Alu -248 63 1 2626 211 31 17 chr2 103656025 103656609 -147031245 + MER82 DNA MER2_type 62 653 0 565 224 84 7 chr2 103657601 103657744 -147030110 - MIR SINE MIR -36 226 73 878 180 31 0 chr2 103658813 103658974 -147028880 + FRAM SINE Alu 1 40 0 1943 112 3 41 chr2 103659546 103659841 -147028013 + AluSx SINE Alu 1 284 -28 2883 22 0 0 chr2 103660671 103660989 -147026865 + AluYb8 SINE Alu 1 318 0 1861 41 0 14 chr2 103661005 103661224 -147026630 + L1PA5 LINE L1 5939 6154 0 1746 150 7 24 chr2 103661607 103661894 -147025960 + L1PA16 LINE L1 5872 6153 -13 21 0 0 0 chr2 103661929 103661950 -147025904 + AT_rich Low_complexity Low_complexity 1 21 0 393 228 323 6 chr2 103662367 103662534 -147025320 + MIR SINE MIR 22 241 -21 25 51 0 0 chr2 103664843 103664882 -147022972 + AT_rich Low_complexity Low_complexity 1 39 0 2171 110 3 0 chr2 103668160 103668450 -147019404 + AluSx SINE Alu 1 291 -21 2190 169 75 27 chr2 103668625 103669039 -147018815 + Tigger2a DNA MER2_type 1 434 0 307 136 0 0 chr2 103670370 103670414 -147017440 + MER116 DNA Mariner 37 80 0 337 245 295 0 chr2 103670542 103670681 -147017173 - MER5A DNA MER1_type 0 189 10 2243 81 10 14 chr2 103671671 103671966 -147015888 - AluY SINE Alu -17 294 1 259 246 88 26 chr2 103672393 103672507 -147015347 + MER5B DNA MER1_type 15 135 -43 203 147 0 0 chr2 103674218 103674252 -147013602 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 244 232 116 0 chr2 103674511 103674580 -147013274 + MER91B DNA MER1_type 1 77 -113 509 250 141 16 chr2 103675206 103675398 -147012456 - MIR SINE MIR -37 225 10 342 123 0 0 chr2 103676291 103676348 -147011506 + (TG)n Simple_repeat Simple_repeat 2 58 0 1783 145 24 28 chr2 103676349 103676639 -147011215 - AluJb SINE Alu -23 289 1 478 289 194 50 chr2 103676652 103677012 -147010842 - L2 LINE L2 -58 3255 2844 33 25 0 0 chr2 103677127 103677167 -147010687 + AT_rich Low_complexity Low_complexity 1 40 0 1384 158 56 130 chr2 103677196 103677822 -147010032 + L1M3 LINE L1 4937 5518 -650 2216 116 7 0 chr2 103677822 103678132 -147009722 + AluSp SINE Alu 1 312 -1 1384 158 56 130 chr2 103678132 103678206 -147009648 + L1M3 LINE L1 5518 5596 -572 184 407 12 0 chr2 103678206 103678292 -147009562 - L2 LINE L2 -600 2714 2628 286 29 0 0 chr2 103678653 103678687 -147009167 - tRNA-Gly-GGA tRNA tRNA -37 38 5 240 304 0 33 chr2 103678913 103679005 -147008849 - L2 LINE L2 0 3313 3225 215 202 143 48 chr2 103679541 103679625 -147008229 + MIR3 SINE MIR 110 201 -7 213 154 0 0 chr2 103681235 103681274 -147006580 + (CA)n Simple_repeat Simple_repeat 2 40 0 521 299 68 36 chr2 103682025 103682463 -147005391 - L1ME4a LINE L1 -179 5942 5491 350 328 69 0 chr2 103683335 103683466 -147004388 + MIR SINE MIR 37 176 -86 191 271 43 0 chr2 103683478 103683548 -147004306 - MIR SINE MIR -41 221 149 * 225 266 177 0 chr2 103683539 103683618 -147004236 + MIR SINE MIR 170 262 0 21 0 0 0 chr2 103683712 103683733 -147004121 + AT_rich Low_complexity Low_complexity 1 21 0 189 231 19 0 chr2 103683910 103683962 -147003892 - MIR SINE MIR 0 262 210 196 338 70 0 chr2 103684367 103684438 -147003416 + MIR SINE MIR 117 192 -70 823 158 0 43 chr2 103684843 103684982 -147002872 - FLAM_A SINE Alu 0 133 1 2496 50 0 23 chr2 103685179 103685482 -147002372 - AluY SINE Alu -15 296 1 30 45 0 0 chr2 103686129 103686173 -147001681 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 103687099 103687129 -147000725 + AT_rich Low_complexity Low_complexity 1 30 0 465 328 28 35 chr2 103687522 103687739 -147000115 + MIR SINE MIR 9 221 -41 219 139 0 0 chr2 103690467 103690503 -146997351 + (CA)n Simple_repeat Simple_repeat 2 37 0 222 313 12 12 chr2 103692260 103692343 -146995511 - L2 LINE L2 -481 2833 2751 863 336 34 59 chr2 103692828 103692946 -146994908 + ERVL LTR ERVL 878 997 -4767 2218 88 10 7 chr2 103692946 103693242 -146994612 + AluSc SINE Alu 1 297 -12 863 336 34 59 chr2 103693242 103693951 -146993903 + ERVL LTR ERVL 997 1684 -4080 936 188 97 5 chr2 103693963 103694018 -146993836 + LTR40c LTR ERVL 204 253 -212 2941 91 16 21 chr2 103694018 103694448 -146993406 + MSTA LTR MaLR 1 428 0 936 188 97 5 chr2 103694448 103694599 -146993255 + LTR40c LTR ERVL 253 429 -36 229 218 146 45 chr2 103694647 103694757 -146993097 + L1ME1 LINE L1 4443 4563 -1583 1361 249 19 21 chr2 103694816 103694842 -146993012 + L1ME1 LINE L1 5487 5512 -654 2707 92 0 13 chr2 103694842 103695221 -146992633 + THE1C LTR MaLR 1 374 -1 1361 249 19 21 chr2 103695221 103695637 -146992217 + L1ME1 LINE L1 5512 5934 -232 * 3989 204 103 122 chr2 103695625 103697985 -146989869 + L1MCa LINE L1 5 2321 -4105 812 215 12 0 chr2 103697985 103698157 -146989697 + FRAM SINE Alu 1 174 -2 1279 222 51 10 chr2 103698157 103698673 -146989181 + L1MCa LINE L1 2313 2854 -3572 1170 253 52 9 chr2 103698698 103699137 -146988717 + L1MCa LINE L1 2919 3376 -3050 1959 249 123 24 chr2 103699146 103700080 -146987774 - L1MCb LINE L1 -4543 2021 995 3584 196 62 15 chr2 103700109 103701231 -146986623 - L1MB8 LINE L1 -13 6165 4988 2153 104 17 0 chr2 103701231 103701518 -146986336 - AluSg SINE Alu -16 294 3 3584 196 62 15 chr2 103701518 103701549 -146986305 - L1MB8 LINE L1 -1190 4988 4960 812 224 20 10 chr2 103701554 103701750 -146986104 - L1MCa LINE L1 -6658 201 4 301 282 0 0 chr2 103701752 103701823 -146986031 - L1MCb LINE L1 -5056 989 919 236 313 0 0 chr2 103702644 103702711 -146985143 - MLT1J2 LTR MaLR -121 329 263 21 0 0 0 chr2 103703808 103703829 -146984025 + AT_rich Low_complexity Low_complexity 1 21 0 1540 189 20 42 chr2 103703831 103704238 -146983616 + L1MB8 LINE L1 5770 6167 -11 28 61 0 0 chr2 103704436 103704485 -146983369 + AT_rich Low_complexity Low_complexity 1 49 0 320 298 81 8 chr2 103704509 103704633 -146983221 + L1ME4a LINE L1 5943 6075 -46 34 24 0 0 chr2 103704643 103704684 -146983170 + AT_rich Low_complexity Low_complexity 1 41 0 1292 210 58 42 chr2 103705455 103705672 -146982182 - MLT1B LTR MaLR 0 390 178 2903 164 19 55 chr2 103705672 103706306 -146981548 - LTR9 LTR ERV1 0 612 2 1561 175 66 11 chr2 103706315 103706601 -146981253 - AluJo SINE Alu -10 302 1 1292 210 58 42 chr2 103706601 103706754 -146981100 - MLT1B LTR MaLR -219 171 4 419 347 0 0 chr2 103706799 103706946 -146980908 + MIR SINE MIR 116 262 0 25 0 0 0 chr2 103708163 103708188 -146979666 + AT_rich Low_complexity Low_complexity 1 25 0 785 155 0 0 chr2 103708188 103708304 -146979550 - FLAM_C SINE Alu -17 116 1 258 261 62 0 chr2 103708436 103708501 -146979353 - L2 LINE L2 -16 3297 3229 786 208 197 18 chr2 103708809 103709093 -146978761 - MER46C DNA MER2_type -2 336 2 188 271 62 0 chr2 103709133 103709181 -146978673 - L3b LINE CR1 -131 1452 1402 188 265 61 121 chr2 103710116 103710248 -146977606 + L2 LINE L2 3189 3312 -1 208 225 0 0 chr2 103710615 103710655 -146977199 + L2 LINE L2 3233 3272 0 225 210 16 0 chr2 103710854 103710916 -146976938 + T-rich Low_complexity Low_complexity 3 65 0 187 370 31 24 chr2 103710975 103711060 -146976794 - MIR SINE MIR -53 209 121 2069 137 0 3 chr2 103711060 103711359 -146976495 + AluSx SINE Alu 2 299 -13 187 370 31 24 chr2 103711359 103711400 -146976454 - MIR SINE MIR -141 121 82 2215 104 3 0 chr2 103711445 103711743 -146976111 - AluSg1 SINE Alu -10 299 1 1825 132 175 24 chr2 103712327 103712699 -146975155 - MSTA LTR MaLR 0 428 1 260 370 98 33 chr2 103712963 103713331 -146974523 + L3 LINE CR1 65 456 -1121 221 309 0 0 chr2 103713354 103713396 -146974458 - L2 LINE L2 -27 3245 3204 227 329 192 0 chr2 103714070 103714143 -146973711 + L2 LINE L2 3144 3230 -42 1229 223 41 33 chr2 103714242 103714682 -146973172 - MLT1D LTR MaLR 0 505 13 392 349 143 23 chr2 103714913 103715214 -146972640 + L3 LINE CR1 1240 1576 -1 2031 82 79 3 chr2 103715239 103715530 -146972324 - AluSq SINE Alu 0 313 1 22 35 0 0 chr2 103716743 103716772 -146971082 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 103716804 103716832 -146971022 + AT_rich Low_complexity Low_complexity 1 28 0 225 212 106 15 chr2 103718602 103718668 -146969186 - L2 LINE L2 -12 3301 3230 25 75 0 0 chr2 103719456 103719509 -146968345 + AT_rich Low_complexity Low_complexity 1 53 0 264 146 0 18 chr2 103719721 103719776 -146968078 - MLT2C2 LTR ERVL -2 513 460 210 224 0 0 chr2 103719777 103719826 -146968028 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 1672 192 69 14 chr2 103719846 103720210 -146967644 - MLT2C2 LTR ERVL -80 384 1 334 284 59 10 chr2 103721584 103721686 -146966168 - MIR SINE MIR -64 144 38 225 308 78 78 chr2 103722512 103722885 -146964969 + L2 LINE L2 2876 3248 -65 1826 139 10 53 chr2 103723039 103723342 -146964512 + AluSx SINE Alu 1 290 -22 988 151 102 39 chr2 103726396 103726602 -146961252 - MER20 DNA MER1_type 0 219 1 400 297 207 4 chr2 103726881 103727113 -146960741 - L2 LINE L2 -21 3292 3014 359 314 88 0 chr2 103727313 103727472 -146960382 + MIR SINE MIR 90 262 0 234 0 0 0 chr2 103727573 103727599 -146960255 + (TG)n Simple_repeat Simple_repeat 2 27 0 1052 295 95 23 chr2 103727760 103728464 -146959390 - L2 LINE L2 -4 3309 2541 23 33 0 0 chr2 103728603 103728633 -146959221 + AT_rich Low_complexity Low_complexity 1 30 0 342 224 82 46 chr2 103728643 103728839 -146959015 - L1MC5 LINE L1 -45 7916 7714 1984 113 0 37 chr2 103728876 103729176 -146958678 - AluY SINE Alu 0 311 23 1527 241 44 44 chr2 103729185 103729779 -146958075 - L1MDa LINE L1 -1074 5466 4873 5895 21 0 0 chr2 103729781 103730492 -146957362 + L1P LINE L1 3749 4459 -1687 439 222 42 12 chr2 103730491 103730658 -146957196 - L1MDa LINE L1 -1662 4878 4707 * 5153 182 52 4 chr2 103730652 103732210 -146955644 - L1MC2 LINE L1 0 6344 4712 614 194 12 120 chr2 103732220 103732462 -146955392 - L1MDa LINE L1 -1817 4723 4508 * 8110 230 72 21 chr2 103732461 103734348 -146953506 - L1MDa LINE L1 -3316 3224 1120 2160 113 0 20 chr2 103734348 103734648 -146953206 + AluSq SINE Alu 1 294 -19 8110 230 72 21 chr2 103734648 103735809 -146952045 - L1MDa LINE L1 -5420 1120 19 1551 251 121 14 chr2 103735817 103736387 -146951467 - L2 LINE L2 -771 2543 1913 1997 118 9 62 chr2 103736657 103736980 -146950874 + AluSq SINE Alu 1 306 -7 41 48 0 0 chr2 103736996 103737058 -146950796 + AT_rich Low_complexity Low_complexity 1 62 0 23 33 0 0 chr2 103737525 103737555 -146950299 + AT_rich Low_complexity Low_complexity 1 30 0 992 190 6 0 chr2 103738269 103738443 -146949411 + FAM SINE Alu 1 175 0 4016 84 15 2 chr2 103739138 103739685 -146948169 - MER41A LTR ERV1 0 554 1 22 0 0 0 chr2 103740674 103740696 -146947158 + AT_rich Low_complexity Low_complexity 1 22 0 2241 116 0 0 chr2 103740844 103741146 -146946708 - AluSg SINE Alu -8 302 1 231 267 139 40 chr2 103741410 103741511 -146946343 - L2 LINE L2 -20 3252 3142 406 244 43 35 chr2 103741575 103741690 -146946164 - MIR SINE MIR -79 183 68 1101 239 48 23 chr2 103741836 103742188 -146945666 - MLT1A2 LTR MaLR -13 361 1 327 275 210 12 chr2 103742406 103742573 -146945281 + MIR SINE MIR 28 227 -35 36 23 0 0 chr2 103742665 103742708 -146945146 + AT_rich Low_complexity Low_complexity 1 43 0 478 183 151 0 chr2 103742734 103742827 -146945027 - FLAM_A SINE Alu -35 107 1 371 265 52 44 chr2 103742833 103742969 -146944885 - MER5B DNA MER1_type -41 137 1 240 258 225 0 chr2 103744751 103744840 -146943014 + L2 LINE L2 3159 3267 -5 206 283 0 0 chr2 103745156 103745216 -146942638 + (CA)n Simple_repeat Simple_repeat 1 60 0 2281 103 0 0 chr2 103745578 103745869 -146941985 - AluSx SINE Alu -21 291 1 26 64 0 0 chr2 103746620 103746667 -146941187 + AT_rich Low_complexity Low_complexity 1 47 0 279 0 0 0 chr2 103746675 103746706 -146941148 + (CA)n Simple_repeat Simple_repeat 2 32 0 180 245 0 0 chr2 103746746 103746799 -146941055 + (TA)n Simple_repeat Simple_repeat 1 53 0 264 253 147 0 chr2 103746906 103747001 -146940853 - MIR SINE MIR 0 262 154 1398 184 72 42 chr2 103748125 103748457 -146939397 + MER2 DNA MER2_type 1 342 -2 875 221 0 0 chr2 103748563 103748726 -146939128 + FRAM SINE Alu 7 169 -7 387 311 179 14 chr2 103748731 103748943 -146938911 - MIR SINE MIR -14 248 2 1657 265 98 28 chr2 103748959 103749995 -146937859 - L1MDa LINE L1 -4399 1681 573 25 31 0 0 chr2 103750058 103750090 -146937764 + AT_rich Low_complexity Low_complexity 1 32 0 284 326 74 19 chr2 103750228 103750443 -146937411 - L1MDa LINE L1 -5573 497 271 256 380 11 5 chr2 103751162 103751346 -146936508 - MER117 DNA MER1_type 0 197 13 265 283 103 97 chr2 103752790 103752935 -146934919 - MIR SINE MIR -9 253 108 2217 109 3 7 chr2 103753191 103753484 -146934370 + AluSx SINE Alu 2 293 -19 3505 122 66 21 chr2 103754016 103754641 -146933213 - MER39B LTR ERV1 0 653 1 1252 187 60 11 chr2 103754772 103755055 -146932799 - L1MB7 LINE L1 -16 6168 5872 405 0 0 0 chr2 103755431 103755476 -146932378 + (TG)n Simple_repeat Simple_repeat 2 46 0 851 252 18 11 chr2 103755872 103756150 -146931704 - LTR4 LTR ERV1 0 596 317 343 267 72 46 chr2 103756339 103756534 -146931320 - LTR4 LTR ERV1 -396 200 1 262 229 0 0 chr2 103758735 103758796 -146929058 + T-rich Low_complexity Low_complexity 1 61 0 2638 127 10 0 chr2 103758805 103759214 -146928640 - L1PB1 LINE L1 -8 6143 5731 1092 119 31 0 chr2 103760396 103760555 -146927299 + FRAM SINE Alu 1 163 -13 195 42 0 0 chr2 103761293 103761317 -146926537 + (TAA)n Simple_repeat Simple_repeat 1 24 0 647 278 57 44 chr2 103761320 103761568 -146926286 - MIR SINE MIR -5 257 7 1402 228 94 9 chr2 103763272 103763698 -146924156 + L1ME2 LINE L1 5695 6156 -8 3765 246 62 12 chr2 103765640 103766860 -146920994 - L1MC4 LINE L1 -302 7740 6460 423 56 0 0 chr2 103767010 103767064 -146920790 + (CA)n Simple_repeat Simple_repeat 2 55 0 308 187 0 13 chr2 103768519 103768594 -146919260 + CT-rich Low_complexity Low_complexity 3 76 0 22 0 0 0 chr2 103768720 103768742 -146919112 + AT_rich Low_complexity Low_complexity 1 22 0 299 292 135 0 chr2 103769058 103769154 -146918700 + L2 LINE L2 3192 3300 -13 342 0 0 0 chr2 103771144 103771182 -146916672 + (TAA)n Simple_repeat Simple_repeat 2 39 0 24 53 0 0 chr2 103772236 103772274 -146915580 + AT_rich Low_complexity Low_complexity 1 38 0 228 231 46 0 chr2 103772359 103772424 -146915430 + (TATG)n Simple_repeat Simple_repeat 1 68 0 342 0 0 0 chr2 103773379 103773417 -146914437 + (TCTA)n Simple_repeat Simple_repeat 2 39 0 180 209 33 22 chr2 103774135 103774226 -146913628 + (TATATG)n Simple_repeat Simple_repeat 2 93 0 206 310 28 35 chr2 103774229 103774371 -146913483 + (CATATA)n Simple_repeat Simple_repeat 4 144 0 615 358 77 35 chr2 103774930 103775411 -146912443 - L2 LINE L2 -5 3308 2808 485 255 136 25 chr2 103775427 103775662 -146912192 - L2 LINE L2 -769 2545 2285 273 283 221 21 chr2 103775666 103775811 -146912043 + L2 LINE L2 2777 2950 -364 2300 164 62 0 chr2 103775887 103776290 -146911564 + MSTA LTR MaLR 1 428 0 347 304 0 0 chr2 103776300 103776379 -146911475 + L2 LINE L2 2991 3069 -244 2136 66 0 0 chr2 103776381 103776637 -146911217 + AluY SINE Alu 42 297 -14 732 133 0 0 chr2 103776649 103776769 -146911085 + L1MA4 LINE L1 6173 6292 -8 502 338 110 24 chr2 103776776 103777448 -146910406 - L2 LINE L2 -1018 2296 1567 198 48 24 48 chr2 103777516 103777558 -146910296 + (GAA)n Simple_repeat Simple_repeat 2 42 0 2203 92 10 10 chr2 103777962 103778266 -146909588 - AluSg SINE Alu -6 304 1 2083 125 127 38 chr2 103778954 103779176 -146908678 + MSTA LTR MaLR 1 202 -226 2106 111 7 20 chr2 103779176 103779482 -146908372 + AluSc SINE Alu 1 302 -7 2083 125 127 38 chr2 103779482 103779652 -146908202 + MSTA LTR MaLR 202 428 0 313 294 67 0 chr2 103779867 103779986 -146907868 - L1ME4a LINE L1 -3 6118 5992 293 284 134 8 chr2 103780435 103780562 -146907292 - MIR SINE MIR -118 144 2 180 0 0 0 chr2 103780935 103780955 -146906899 + (T)n Simple_repeat Simple_repeat 1 20 0 412 277 218 20 chr2 103780999 103781201 -146906653 + MIR SINE MIR 11 252 -10 1924 92 80 0 chr2 103782458 103782749 -146905105 + AluSq SINE Alu 1 312 0 252 77 0 0 chr2 103785154 103785193 -146902661 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 5474 77 28 15 chr2 103785194 103785988 -146901866 - L1MA1 LINE L1 -10 6292 5489 2226 133 0 0 chr2 103786108 103786410 -146901444 + AluSx SINE Alu 1 302 -10 195 314 14 0 chr2 103787541 103787611 -146900243 + L3 LINE CR1 1504 1574 -3 2101 217 30 13 chr2 103788061 103788604 -146899250 - L1MD3 LINE L1 -8 7987 7436 229 316 31 20 chr2 103789215 103789313 -146898541 - MIR SINE MIR -81 127 29 247 243 29 43 chr2 103789609 103789679 -146898175 + MIR SINE MIR 114 182 -80 1893 154 73 18 chr2 103789925 103790308 -146897546 - L1MC1 LINE L1 0 6333 5930 2765 177 21 27 chr2 103790331 103791091 -146896763 - L1MC1 LINE L1 0 6154 5433 550 297 22 22 chr2 103791095 103791277 -146896577 - MIR SINE MIR -21 241 60 958 201 0 11 chr2 103792519 103792698 -146895156 - MER45A DNA AcHobo -1 177 1 427 93 0 130 chr2 103794020 103794081 -146893773 - L1MA7 LINE L1 -1 6290 6247 239 0 32 0 chr2 103794081 103794112 -146893742 + (TA)n Simple_repeat Simple_repeat 1 32 0 427 93 0 130 chr2 103794112 103794158 -146893696 - L1MA7 LINE L1 -44 6247 6197 195 311 85 66 chr2 103796451 103796557 -146891297 + MIR SINE MIR 20 127 -135 598 260 14 0 chr2 103799436 103799582 -146888272 - MIR SINE MIR -36 226 79 2268 96 0 3 chr2 103800011 103800302 -146887552 + AluSx SINE Alu 1 290 -22 443 287 18 42 chr2 103800344 103800511 -146887343 + MIR SINE MIR 87 249 -13 392 322 126 44 chr2 103800712 103801029 -146886825 - L2 LINE L2 -13 3259 2917 212 0 36 0 chr2 103801591 103801619 -146886235 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 637 90 0 0 chr2 103802324 103802402 -146885452 - MADE1 DNA Mariner 0 80 3 510 216 79 128 chr2 103802502 103803034 -146884820 - L1MC5 LINE L1 -74 7887 7382 26 0 0 0 chr2 103803103 103803129 -146884725 + AT_rich Low_complexity Low_complexity 1 26 0 467 278 17 50 chr2 103806182 103806362 -146881492 + MER5B DNA MER1_type 2 175 -3 1017 169 62 0 chr2 103806889 103807067 -146880787 - MER5A DNA MER1_type 0 189 1 278 238 124 57 chr2 103807115 103807220 -146880634 - LTR16A1 LTR ERVL 0 457 346 181 225 0 25 chr2 103807561 103807601 -146880253 - MER5C DNA MER1_type 0 324 286 357 241 54 45 chr2 103807772 103807884 -146879970 - MER5C DNA MER1_type -201 123 11 2130 127 73 48 chr2 103807895 103808108 -146879746 - THE1B LTR MaLR 0 364 137 2132 130 3 3 chr2 103808108 103808416 -146879438 + AluSx SINE Alu 1 308 -4 2130 127 73 48 chr2 103808416 103808557 -146879297 - THE1B LTR MaLR -227 137 1 11459 94 11 57 chr2 103808557 103810213 -146877641 - THE1B-int LTR MaLR 0 1580 1 2394 121 51 25 chr2 103810213 103810568 -146877286 - THE1B LTR MaLR 0 364 1 203 353 39 58 chr2 103810860 103811016 -146876838 + MIR SINE MIR 8 160 -102 1624 195 0 42 chr2 103811528 103811841 -146876013 - AluJb SINE Alu -12 300 1 468 351 34 31 chr2 103812061 103812354 -146875500 + L1ME3A LINE L1 1308 1601 -4941 1443 268 60 41 chr2 103812487 103813041 -146874813 - MLT1F1 LTR MaLR 0 567 1 439 307 47 112 chr2 103813046 103813733 -146874121 - MLT1F1-int LTR MaLR -5 1366 725 793 304 69 18 chr2 103813976 103814419 -146873435 - MLT1F1-int LTR MaLR -784 587 2 1166 277 42 12 chr2 103814420 103814756 -146873098 - MLT1F1 LTR MaLR 0 567 222 569 82 0 0 chr2 103814818 103814891 -146872963 - MSTB LTR MaLR -353 73 1 270 291 12 12 chr2 103815027 103815113 -146872741 - MLT1I LTR MaLR -263 146 61 519 195 0 0 chr2 103815212 103815325 -146872529 + (TA)n Simple_repeat Simple_repeat 2 114 0 2835 272 70 47 chr2 103815325 103816814 -146871040 + L1ME3A LINE L1 3273 4818 -1826 1583 202 83 47 chr2 103816814 103817175 -146870679 - MLT1A2 LTR MaLR 0 374 1 2835 272 70 47 chr2 103817175 103817587 -146870267 + L1ME3A LINE L1 4818 5219 -1425 869 256 58 113 chr2 103817675 103818592 -146869262 + L1ME3A LINE L1 5648 6521 -139 2291 104 7 3 chr2 103819158 103819465 -146868389 - AluSx SINE Alu -2 310 3 352 228 147 37 chr2 103820536 103820672 -146867182 + MIR3 SINE MIR 9 159 -49 2200 100 0 3 chr2 103820818 103821109 -146866745 + AluSg SINE Alu 1 290 -20 586 253 24 36 chr2 103821283 103821449 -146866405 - MLT1J LTR MaLR 0 511 348 398 106 0 15 chr2 103821565 103821631 -146866223 + (GGAA)n Simple_repeat Simple_repeat 3 67 0 280 325 86 43 chr2 103821632 103821795 -146866059 - MLT1J LTR MaLR -261 250 81 637 239 51 34 chr2 103821796 103821972 -146865882 + MLT1B LTR MaLR 2 180 -210 679 199 85 14 chr2 103821974 103822115 -146865739 + FRAM SINE Alu 22 172 -4 205 138 0 0 chr2 103822117 103822146 -146865708 + (CAG)n Simple_repeat Simple_repeat 1 29 0 549 276 33 0 chr2 103822175 103822327 -146865527 + MLT1B LTR MaLR 199 355 -35 997 213 98 126 chr2 103822726 103823276 -146864578 + MLT1F LTR MaLR 1 535 -7 2543 43 0 7 chr2 103823524 103823823 -146864031 + AluY SINE Alu 1 297 -14 270 0 0 0 chr2 103823823 103823853 -146864001 + (TA)n Simple_repeat Simple_repeat 2 31 0 196 182 0 0 chr2 103825713 103825746 -146862108 - MIR SINE MIR -11 251 219 2427 88 0 0 chr2 103825991 103826287 -146861567 - AluSq SINE Alu -17 296 1 491 275 70 18 chr2 103826295 103826466 -146861388 - MIR SINE MIR -70 192 13 22 56 0 0 chr2 103828509 103828545 -146859309 + AT_rich Low_complexity Low_complexity 1 36 0 45190 39 0 1 chr2 103828654 103834808 -146853046 - L1PA3 LINE L1 0 6155 9 320 117 0 2 chr2 103834851 103834901 -146852953 - MLT2D LTR ERVL 0 554 416 * 1171 150 30 64 chr2 103834900 103835133 -146852721 - MLT2D LTR ERVL -189 225 1 1533 94 84 5 chr2 103835246 103835459 -146852395 - MER30 DNA MER1_type 0 230 1 269 221 36 86 chr2 103835539 103835679 -146852175 + LTR16B LTR ERVL 319 451 -13 358 287 58 50 chr2 103837197 103837405 -146850449 - L1MD3 LINE L1 0 8042 7849 2384 186 40 38 chr2 103837528 103838056 -146849798 - L1MA10 LINE L1 0 6334 5806 395 337 51 35 chr2 103838091 103838486 -146849368 - L1MC4 LINE L1 -364 7678 7278 245 278 42 0 chr2 103838630 103838702 -146849152 - MIR3 SINE MIR -20 188 114 592 159 35 21 chr2 103838953 103839098 -146848756 - MER33 DNA MER1_type -27 297 151 1981 136 0 14 chr2 103839103 103839389 -146848465 + AluSx SINE Alu 1 282 -30 216 86 0 0 chr2 103839389 103839424 -146848430 + (TC)n Simple_repeat Simple_repeat 2 36 0 204 40 0 0 chr2 103839429 103839454 -146848400 + (TG)n Simple_repeat Simple_repeat 2 26 0 297 250 134 27 chr2 103839479 103839591 -146848263 - MER33 DNA MER1_type -180 144 21 520 267 146 0 chr2 103839961 103840126 -146847728 + MER45C DNA AcHobo 72 260 -693 608 245 154 11 chr2 103840195 103840383 -146847471 + MER45C DNA AcHobo 739 953 0 26 30 0 0 chr2 103840775 103840808 -146847046 + AT_rich Low_complexity Low_complexity 1 33 0 980 81 6 19 chr2 103841375 103841535 -146846319 + (TTTC)n Simple_repeat Simple_repeat 3 160 0 809 114 5 49 chr2 103841535 103841719 -146846135 + (TCCCC)n Simple_repeat Simple_repeat 3 178 0 1883 169 10 0 chr2 103841723 103842025 -146845829 - AluSx SINE Alu -7 305 1 23 0 0 0 chr2 103843439 103843462 -146844392 + AT_rich Low_complexity Low_complexity 1 23 0 393 75 0 0 chr2 103844665 103844718 -146843136 + (TG)n Simple_repeat Simple_repeat 2 54 0 1151 36 0 0 chr2 103845131 103845327 -146842527 + L1PA3 LINE L1 6015 6210 0 260 356 0 20 chr2 103845520 103845621 -146842233 + MIR SINE MIR 134 232 -30 3367 138 2 13 chr2 103848619 103849154 -146838700 + MER1A DNA MER1_type 1 529 0 6222 142 65 14 chr2 103850335 103851506 -146836348 + Tigger3b DNA MER2_type 1 1230 -1 265 260 100 30 chr2 103851569 103851669 -146836185 + MIR SINE MIR 113 219 -43 2036 151 52 0 chr2 103851863 103852227 -146835627 - MLT1B LTR MaLR -7 383 1 14228 30 7 0 chr2 103852336 103854801 -146833053 + L1PA4 LINE L1 3681 6154 -1 1065 141 0 0 chr2 103854808 103854971 -146832883 + L1PA16 LINE L1 6004 6166 0 247 114 0 0 chr2 103855814 103855849 -146832005 - U2 snRNA snRNA -153 35 1 22 35 0 0 chr2 103855949 103855978 -146831876 + AT_rich Low_complexity Low_complexity 1 29 0 299 291 102 41 chr2 103856493 103856689 -146831165 - MIR SINE MIR 0 262 55 22 56 0 0 chr2 103856774 103856810 -146831044 + AT_rich Low_complexity Low_complexity 1 36 0 29 70 0 0 chr2 103857078 103857135 -146830719 + AT_rich Low_complexity Low_complexity 1 57 0 21 71 0 0 chr2 103857175 103857217 -146830637 + AT_rich Low_complexity Low_complexity 1 42 0 852 288 75 7 chr2 103857906 103858198 -146829656 - MLT1I LTR MaLR 0 409 98 2833 155 71 42 chr2 103859287 103859875 -146827979 - MER6A DNA MER2_type 0 605 1 303 262 60 83 chr2 103860159 103860327 -146827527 - MIR SINE MIR -2 260 97 2533 241 47 7 chr2 103861718 103862320 -146825534 + MLT1E2 LTR MaLR 1 626 0 274 81 9 0 chr2 103863185 103863229 -146824625 - MLT2B3 LTR ERVL 0 554 469 241 224 0 0 chr2 103863229 103863296 -146824558 - L1MC4 LINE L1 -1362 6680 6614 2765 61 24 5 chr2 103863356 103863732 -146824122 - MLT2A1 LTR ERVL -60 384 2 4105 54 9 7 chr2 103863733 103864274 -146823580 - HERVL-A1 LTR ERVL 0 5654 5113 36445 80 9 3 chr2 103864274 103869252 -146818602 - HERVL-A1 LTR ERVL -647 5007 1 301 158 0 0 chr2 103869252 103869309 -146818545 - MLT2A1 LTR ERVL 0 520 464 258 77 51 26 chr2 103869311 103869389 -146818465 + (TA)n Simple_repeat Simple_repeat 1 80 0 2757 76 33 8 chr2 103869403 103869798 -146818056 - MLT2A1 LTR ERVL -37 407 3 312 280 0 20 chr2 103869803 103869903 -146817951 - MLT1I LTR MaLR -26 383 286 276 241 0 24 chr2 103870008 103870091 -146817763 - MLT1I LTR MaLR -315 94 14 228 67 0 0 chr2 103870099 103870129 -146817725 + (T)n Simple_repeat Simple_repeat 1 30 0 1758 141 63 36 chr2 103870718 103871081 -146816773 - THE1C LTR MaLR 0 375 3 9219 133 43 9 chr2 103871091 103872610 -146815244 - THE1C-int LTR MaLR -8 1572 1 1839 133 69 33 chr2 103872610 103872972 -146814882 - THE1C LTR MaLR 0 375 1 492 286 7 20 chr2 103873394 103873541 -146814313 + L2 LINE L2 3164 3308 -5 366 354 68 13 chr2 103873595 103873832 -146814022 + MIR SINE MIR 12 261 -1 22 35 0 0 chr2 103874065 103874094 -146813760 + AT_rich Low_complexity Low_complexity 1 29 0 2164 123 7 0 chr2 103874377 103874678 -146813176 - AluSq SINE Alu -10 303 1 211 264 0 19 chr2 103875224 103875277 -146812577 + CT-rich Low_complexity Low_complexity 3 54 0 208 211 115 0 chr2 103875392 103875444 -146812410 - MIR3 SINE MIR -29 179 122 309 226 57 75 chr2 103875838 103875944 -146811910 + MIR3 SINE MIR 90 193 -15 243 261 27 72 chr2 103876032 103876143 -146811711 - L2 LINE L2 -16 3297 3192 439 304 136 27 chr2 103876245 103876465 -146811389 - MIR SINE MIR 0 262 19 672 228 99 81 chr2 103878592 103878974 -146808880 - MLT1H LTR MaLR -142 407 19 213 273 0 0 chr2 103880360 103880404 -146807450 + polypurine Low_complexity Low_complexity 1 44 0 825 243 41 60 chr2 103880463 103880940 -146806914 - MLT1F LTR MaLR -5 543 22 190 256 0 0 chr2 103882206 103882249 -146805605 - L2 LINE L2 -89 3224 3182 181 219 0 0 chr2 103882318 103882359 -146805495 - L2 LINE L2 -165 3148 3108 264 178 0 0 chr2 103882474 103882519 -146805335 - MER5B DNA MER1_type -5 173 129 810 231 41 0 chr2 103882519 103882740 -146805114 + L1PA16 LINE L1 5936 6165 -1 446 229 9 29 chr2 103882744 103882849 -146805005 - MER5B DNA MER1_type -49 129 27 277 262 19 39 chr2 103882973 103883076 -146804778 + MER5B DNA MER1_type 3 103 -75 247 267 82 104 chr2 103883678 103883813 -146804041 - MIR SINE MIR -60 148 17 260 362 113 3 chr2 103884533 103884815 -146803039 + L2 LINE L2 2951 3263 -50 234 128 0 0 chr2 103884824 103884863 -146802991 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 198 0 0 0 chr2 103885897 103885919 -146801935 + (CA)n Simple_repeat Simple_repeat 2 23 0 24 0 0 0 chr2 103886433 103886457 -146801397 + AT_rich Low_complexity Low_complexity 1 24 0 267 297 0 0 chr2 103889152 103889226 -146798628 + MIR SINE MIR 63 136 -72 297 135 0 0 chr2 103889869 103889921 -146797933 + (TG)n Simple_repeat Simple_repeat 2 53 0 1525 175 21 35 chr2 103889928 103890214 -146797640 - AluJo SINE Alu -30 282 1 189 0 0 0 chr2 103890777 103890798 -146797056 + (A)n Simple_repeat Simple_repeat 1 21 0 881 199 0 12 chr2 103891882 103892043 -146795811 - FRAM SINE Alu -18 158 1 234 0 0 0 chr2 103892425 103892451 -146795403 + (GA)n Simple_repeat Simple_repeat 1 26 0 3004 258 74 27 chr2 103892466 103894005 -146793849 + L1MEc LINE L1 534 2144 -4252 192 77 0 0 chr2 103894306 103894332 -146793522 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 229 296 193 0 chr2 103894409 103894497 -146793357 + L2 LINE L2 3193 3297 -16 1273 231 33 30 chr2 103894667 103895031 -146792823 + MLT1B LTR MaLR 15 379 -11 273 57 0 0 chr2 103897919 103897954 -146789900 + (TG)n Simple_repeat Simple_repeat 2 36 0 793 192 66 25 chr2 103898065 103898263 -146789591 - MER3 DNA MER1_type -2 207 2 693 30 40 0 chr2 103898814 103898913 -146788941 + (TTTTA)n Simple_repeat Simple_repeat 2 104 0 265 307 107 5 chr2 103901993 103902169 -146785685 + MIR SINE MIR 4 196 -66 430 304 38 114 chr2 103904047 103904521 -146783333 - L2 LINE L2 -8 3264 2827 244 181 14 14 chr2 103904933 103905005 -146782849 - L1ME4a LINE L1 -1 6120 6049 425 241 155 70 chr2 103905012 103905242 -146782612 - MLT1J2 LTR MaLR -7 439 183 485 289 122 45 chr2 103905242 103905660 -146782194 + MLT1J2 LTR MaLR 1 450 0 425 241 155 70 chr2 103905660 103905743 -146782111 - MLT1J2 LTR MaLR -263 183 108 460 326 0 0 chr2 103905912 103906044 -146781810 + LTR16A LTR ERVL 208 339 -111 218 288 0 0 chr2 103906222 103906288 -146781566 + (TA)n Simple_repeat Simple_repeat 2 67 0 270 266 23 23 chr2 103906849 103906977 -146780877 - L1ME LINE L1 -405 5716 5589 28 99 0 0 chr2 103907478 103907569 -146780285 + AT_rich Low_complexity Low_complexity 1 91 0 470 340 65 22 chr2 103907665 103907989 -146779865 - L1ME LINE L1 -1680 4466 4129 23 33 0 0 chr2 103908148 103908178 -146779676 + AT_rich Low_complexity Low_complexity 1 30 0 264 271 23 23 chr2 103908427 103908560 -146779294 - L1ME LINE L1 -2365 3781 3649 28 48 0 0 chr2 103908718 103908760 -146779094 + AT_rich Low_complexity Low_complexity 1 42 0 533 308 108 29 chr2 103908782 103909236 -146778618 - L1ME LINE L1 -2709 3437 2948 31 26 0 0 chr2 103909429 103909467 -146778387 + AT_rich Low_complexity Low_complexity 1 38 0 315 313 120 36 chr2 103909576 103910152 -146777702 - L1ME LINE L1 -3374 2772 2149 28 0 0 0 chr2 103910329 103910357 -146777497 + AT_rich Low_complexity Low_complexity 1 28 0 645 226 141 11 chr2 103910367 103910544 -146777310 + MIR SINE MIR 33 232 -30 445 146 0 2 chr2 103910544 103910796 -146777058 + AluJb SINE Alu 1 305 -7 2081 124 0 13 chr2 103910874 103911172 -146776682 + AluSx SINE Alu 9 302 -10 2506 37 10 7 chr2 103912610 103912910 -146774944 + AluY SINE Alu 1 301 -10 1949 111 0 8 chr2 103913126 103913388 -146774466 - AluSx SINE Alu -37 275 16 25 51 0 0 chr2 103914083 103914122 -146773732 + AT_rich Low_complexity Low_complexity 1 39 0 1127 170 33 111 chr2 103914902 103915253 -146772601 - MLT1A1 LTR MaLR -43 414 1 1515 141 114 27 chr2 103915465 103915766 -146772088 + AluSq SINE Alu 1 324 0 310 349 138 7 chr2 103916020 103916461 -146771393 - LTR33 LTR ERVL -11 510 12 219 69 0 0 chr2 103916482 103916511 -146771343 + (TG)n Simple_repeat Simple_repeat 1 29 0 2540 57 0 22 chr2 103918024 103918342 -146769512 - AluY SINE Alu 0 311 1 941 239 144 72 chr2 103919165 103919638 -146768216 - MLT1F LTR MaLR -35 507 1 275 239 48 102 chr2 103919703 103919870 -146767984 - MIR SINE MIR -58 204 47 638 217 8 0 chr2 103920459 103920588 -146767266 - MER20 DNA MER1_type -1 218 89 207 0 0 0 chr2 103920590 103920613 -146767241 + (CA)n Simple_repeat Simple_repeat 1 23 0 320 326 0 0 chr2 103922644 103922730 -146765124 + (TG)n Simple_repeat Simple_repeat 1 86 0 2582 35 3 16 chr2 103925687 103926000 -146761854 + AluY SINE Alu 1 309 -2 202 238 0 95 chr2 103926304 103926367 -146761487 + MER5A DNA MER1_type 1 57 -132 283 259 49 0 chr2 103926905 103926986 -146760868 - MIR SINE MIR -84 124 40 1827 167 106 3 chr2 103927217 103927576 -146760278 - MSTD LTR MaLR 0 396 1 246 62 0 0 chr2 103929783 103929815 -146758039 + (CA)n Simple_repeat Simple_repeat 2 33 0 210 143 0 0 chr2 103930068 103930103 -146757751 + (T)n Simple_repeat Simple_repeat 1 35 0 467 122 0 12 chr2 103931164 103931246 -146756608 + (TCCC)n Simple_repeat Simple_repeat 4 84 0 536 280 98 27 chr2 103931908 103932133 -146755721 - MIR SINE MIR -1 261 21 231 204 0 0 chr2 103932555 103932599 -146755255 + CT-rich Low_complexity Low_complexity 4 47 0 235 266 0 16 chr2 103933810 103933874 -146753980 + CT-rich Low_complexity Low_complexity 2 64 0 727 348 88 26 chr2 103933914 103934735 -146753119 + L2 LINE L2 1528 2399 -915 225 347 129 35 chr2 103934958 103935275 -146752579 + L2 LINE L2 2967 3313 0 444 301 74 40 chr2 103935361 103935537 -146752317 + MIR3 SINE MIR 6 187 -21 438 306 106 52 chr2 103935714 103936139 -146751715 + MLT1J LTR MaLR 28 475 -36 716 271 30 27 chr2 103936243 103936510 -146751344 + MLT1G1 LTR MaLR 1 312 -283 494 302 42 28 chr2 103936510 103936722 -146751132 - MIR SINE MIR -46 216 2 23 33 0 0 chr2 103936875 103936905 -146750949 + AT_rich Low_complexity Low_complexity 1 30 0 277 346 103 21 chr2 103937924 103938158 -146749696 + MIR SINE MIR 9 261 -1 268 254 15 0 chr2 103938505 103938572 -146749282 + Tigger5 DNA MER2_type 2256 2323 0 278 304 71 30 chr2 103939308 103939476 -146748378 + MIR SINE MIR 46 220 -42 2028 110 65 0 chr2 103939518 103939808 -146748046 + AluSg SINE Alu 2 310 0 181 283 75 0 chr2 103940797 103940850 -146747004 + L2 LINE L2 3214 3270 -2 265 317 92 25 chr2 103942949 103943069 -146744785 + MIR3 SINE MIR 45 172 -36 3063 180 15 11 chr2 103944595 103945211 -146742643 + L1PB4 LINE L1 5535 6152 -4 1686 164 48 0 chr2 103945718 103946030 -146741824 + AluSx SINE Alu 3 327 0 180 380 0 0 chr2 103946345 103946395 -146741459 + MIR SINE MIR 98 147 -61 219 352 130 9 chr2 103947319 103947427 -146740427 - MIR SINE MIR -73 135 15 302 303 69 32 chr2 103947508 103947696 -146740158 - L1ME3A LINE L1 -1 6169 5975 2977 190 38 5 chr2 103947754 103948687 -146739167 - L1MD3 LINE L1 -554 6059 5265 6346 203 91 65 chr2 103948704 103950459 -146737395 - L1MD3 LINE L1 -2556 3870 2162 2068 169 15 0 chr2 103950459 103950796 -146737058 + MER7A DNA MER2_type 4 343 -3 6346 203 91 65 chr2 103950796 103951379 -146736475 - L1MD3 LINE L1 -4264 2162 1596 311 258 0 0 chr2 103951379 103951441 -146736413 - MER7A DNA MER2_type -281 67 6 6346 203 91 65 chr2 103951441 103952330 -146735524 - L1MD3 LINE L1 -4830 1596 478 2249 135 12 0 chr2 103952330 103952663 -146735191 + MER1B DNA MER1_type 1 337 0 6346 203 91 65 chr2 103952663 103952794 -146735060 - L1MD3 LINE L1 -5948 478 352 22 80 0 0 chr2 103952967 103953017 -146734837 + AT_rich Low_complexity Low_complexity 1 50 0 1278 178 58 54 chr2 103953017 103953293 -146734561 - AluJo SINE Alu -30 282 6 1151 204 95 7 chr2 103953299 103953584 -146734270 - L1MD3 LINE L1 -6089 337 28 4679 161 12 16 chr2 103953692 103953916 -146733938 + L1 LINE L1 4102 4325 -1821 2105 104 16 3 chr2 103953916 103954224 -146733630 + AluSx SINE Alu 1 312 0 4679 161 12 16 chr2 103954224 103954932 -146732922 + L1 LINE L1 4325 5030 -1116 831 273 28 50 chr2 103954929 103955288 -146732566 - L1ME LINE L1 -397 5773 5423 * 216 0 0 0 chr2 103956261 103956285 -146731569 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 402 216 31 0 chr2 103956533 103956630 -146731224 + L1PA12 LINE L1 6056 6155 -13 203 173 19 0 chr2 103957995 103958047 -146729807 + GA-rich Low_complexity Low_complexity 2 54 0 26 0 0 0 chr2 103958312 103958338 -146729516 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 103958977 103958999 -146728855 + AT_rich Low_complexity Low_complexity 1 22 0 339 233 0 56 chr2 103960640 103960730 -146727124 - L2 LINE L2 -14 3299 3215 677 200 65 32 chr2 103960748 103960903 -146726951 - MER63 DNA MER1_type -275 787 2 194 187 66 99 chr2 103960903 103960994 -146726860 - L2 LINE L2 -113 3200 3113 354 339 96 17 chr2 103961093 103961270 -146726584 + MIR3 SINE MIR 3 193 -15 1751 98 7 65 chr2 103961568 103961844 -146726010 - AluSg SINE Alu -11 299 40 274 259 82 109 chr2 103962116 103962310 -146725544 + MIR SINE MIR 14 190 -72 1585 184 10 20 chr2 103967540 103967833 -146720021 + AluJo SINE Alu 5 294 -18 280 372 109 16 chr2 103968416 103968599 -146719255 + MIR SINE MIR 15 214 -48 207 100 0 0 chr2 103968828 103968858 -146718996 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 319 235 78 10 chr2 103969911 103970013 -146717841 + Charlie7 DNA MER1_type 84 192 -2420 615 307 25 13 chr2 103970270 103970508 -146717346 + Charlie7 DNA MER1_type 215 455 -2157 329 244 87 0 chr2 103970614 103970729 -146717125 + Charlie7 DNA MER1_type 599 723 -1889 226 356 79 0 chr2 103972175 103972276 -146715578 + L2 LINE L2 3155 3263 -9 296 74 0 111 chr2 103973128 103973162 -146714692 - L1MA8 LINE L1 0 6291 6269 2160 112 3 0 chr2 103973162 103973457 -146714397 + AluSp SINE Alu 1 296 -17 296 74 0 111 chr2 103973457 103973503 -146714351 - L1MA8 LINE L1 -22 6269 6220 26 30 0 0 chr2 103974101 103974134 -146713720 + AT_rich Low_complexity Low_complexity 1 33 0 1978 122 34 0 chr2 103974192 103974486 -146713368 - AluSx SINE Alu -8 304 1 196 230 15 0 chr2 103975996 103976131 -146711723 + (TA)n Simple_repeat Simple_repeat 1 137 0 21 0 0 0 chr2 103976140 103976161 -146711693 + AT_rich Low_complexity Low_complexity 1 21 0 395 290 40 0 chr2 103976237 103976337 -146711517 + L2 LINE L2 3210 3313 0 1427 310 121 48 chr2 103976613 103977941 -146709913 + L2 LINE L2 1599 3036 -277 24 0 0 0 chr2 103978604 103978628 -146709226 + AT_rich Low_complexity Low_complexity 1 24 0 245 341 48 36 chr2 103979974 103980141 -146707713 - MIR3 SINE MIR -7 201 33 474 311 88 34 chr2 103980856 103981297 -146706557 + MLT1L LTR MaLR 151 615 0 25 0 0 0 chr2 103981991 103982016 -146705838 + AT_rich Low_complexity Low_complexity 1 25 0 195 42 0 0 chr2 103982273 103982297 -146705557 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 2052 133 0 29 chr2 103983252 103983568 -146704286 - AluSp SINE Alu -5 308 2 598 35 24 35 chr2 103983657 103983742 -146704112 - L1PA5 LINE L1 -5 6149 6066 296 335 78 12 chr2 103984083 103984250 -146703604 + MIR SINE MIR 24 201 -61 440 238 84 14 chr2 103984677 103984820 -146703034 - MLT1D LTR MaLR -48 457 305 287 299 26 34 chr2 103984900 103985017 -146702837 + MLT1K LTR MaLR 391 506 -82 11157 216 42 47 chr2 103985565 103985935 -146701919 - L1MA9 LINE L1 0 7272 6902 216 0 0 0 chr2 103985935 103985959 -146701895 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2229 92 0 0 chr2 103985959 103986241 -146701613 - AluY SINE Alu -29 282 1 11157 216 42 47 chr2 103986241 103990153 -146697701 - L1MA9 LINE L1 -369 6903 3340 2144 129 3 0 chr2 103990153 103990464 -146697390 - AluSx SINE Alu 0 312 1 11157 216 42 47 chr2 103990464 103992305 -146695549 - L1MA9 LINE L1 -3932 3340 1491 775 217 116 0 chr2 103992545 103992734 -146695120 - L1MB5 LINE L1 0 6174 5964 390 267 0 0 chr2 103992736 103992908 -146694946 + (TA)n Simple_repeat Simple_repeat 1 172 0 339 261 0 22 chr2 103992934 103993026 -146694828 - L1MC4 LINE L1 -1339 6703 6614 1744 246 27 6 chr2 103993027 103993503 -146694351 - L1M4 LINE L1 -1019 5127 4642 266 426 42 0 chr2 103993532 103993722 -146694132 - MLT-int LTR MaLR -444 1291 1094 2496 211 15 20 chr2 103993738 103994277 -146693577 - MLT1A1-int LTR MaLR -973 762 227 283 236 0 14 chr2 103994384 103994456 -146693398 + L1ME1 LINE L1 5797 5867 -297 * 7625 185 7 19 chr2 103994435 103997222 -146690632 + L1PB1 LINE L1 3394 6150 -1 1059 233 94 47 chr2 103997272 103997611 -146690243 - MLT1A1 LTR MaLR -5 360 6 498 232 9 0 chr2 103997620 103997732 -146690122 - MLT1A1-int LTR MaLR -4 1731 1619 1987 134 45 31 chr2 103997732 103998091 -146689763 + THE1B LTR MaLR 1 364 0 5247 101 101 2 chr2 103998091 103998881 -146688973 + THE1B-int LTR MaLR 1 868 -712 1296 168 52 41 chr2 103998921 103999189 -146688665 + THE1B LTR MaLR 94 364 0 3724 253 20 112 chr2 103999193 104000358 -146687496 - MLT1A1-int LTR MaLR -75 1576 622 1732 156 48 38 chr2 104000358 104000729 -146687125 - THE1C LTR MaLR 0 375 1 3724 253 20 112 chr2 104000729 104001299 -146686555 - MLT1A1-int LTR MaLR -1029 622 1 988 246 130 20 chr2 104001299 104001653 -146686201 - MSTD LTR MaLR -1 395 3 596 245 14 7 chr2 104001661 104001808 -146686046 + L1ME1 LINE L1 5903 6031 -135 605 184 14 57 chr2 104001814 104001955 -146685899 - AluJo SINE Alu -177 135 1 248 269 23 100 chr2 104001955 104002008 -146685846 + L1ME1 LINE L1 6040 6095 -71 2339 19 0 8 chr2 104002008 104002274 -146685580 - AluY SINE Alu -7 304 41 248 269 23 100 chr2 104002274 104002350 -146685504 + L1ME1 LINE L1 6095 6159 -7 45 34 0 0 chr2 104002460 104002519 -146685335 + AT_rich Low_complexity Low_complexity 1 59 0 14226 178 19 14 chr2 104002519 104006650 -146681204 - L1MA2 LINE L1 0 7723 3571 1108 186 17 59 chr2 104006650 104006887 -146680967 - AluJb SINE Alu 0 312 86 19448 170 35 15 chr2 104006888 104010381 -146677473 - L1MA2 LINE L1 -3984 3581 17 4883 75 11 0 chr2 104012137 104012788 -146675066 - L1P3 LINE L1 -4776 1685 1028 1096 120 6 0 chr2 104012780 104012963 -146674891 - L1P LINE L1 -4599 1547 1364 * 12989 80 1 0 chr2 104012963 104015611 -146672243 + L1PA7 LINE L1 3543 6149 -5 210 195 49 0 chr2 104016178 104016219 -146671635 + polypurine Low_complexity Low_complexity 2 44 0 23 0 0 0 chr2 104016575 104016598 -146671256 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 104016959 104016981 -146670873 + AT_rich Low_complexity Low_complexity 1 22 0 234 0 0 0 chr2 104017584 104017610 -146670244 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 258 32 0 0 chr2 104018416 104018447 -146669407 + (TG)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr2 104019425 104019453 -146668401 + AT_rich Low_complexity Low_complexity 1 28 0 2400 74 10 0 chr2 104019799 104020097 -146667757 - AluY SINE Alu -10 301 1 257 219 0 31 chr2 104020408 104020472 -146667382 + HERVL LTR ERVL 3185 3246 -2408 385 337 24 16 chr2 104021064 104021313 -146666541 + HERVL LTR ERVL 3873 4123 -1531 261 0 0 0 chr2 104021618 104021647 -146666207 + (CA)n Simple_repeat Simple_repeat 1 29 0 602 221 0 5 chr2 104022418 104022634 -146665220 + CT-rich Low_complexity Low_complexity 1 214 0 377 308 62 19 chr2 104024368 104024523 -146663331 + L1M4 LINE L1 2211 2379 -3767 7533 31 0 0 chr2 104024523 104025835 -146662019 + L1PA3 LINE L1 4840 6152 -3 377 308 62 19 chr2 104025835 104025887 -146661967 + L1M4 LINE L1 2379 2427 -3719 8041 201 21 18 chr2 104026239 104028568 -146659286 + L1MA5A LINE L1 3262 5598 -1967 644 202 64 17 chr2 104028926 104029099 -146658755 + MER5A DNA MER1_type 9 189 0 212 299 96 13 chr2 104029099 104029201 -146658653 - MIR SINE MIR -52 156 45 9089 209 22 27 chr2 104029723 104030927 -146656927 - L1 LINE L1 -1283 4863 3654 390 42 0 0 chr2 104030927 104030975 -146656879 + (TCCC)n Simple_repeat Simple_repeat 1 48 0 1045 123 11 6 chr2 104030975 104031154 -146656700 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 9089 209 22 27 chr2 104031154 104032220 -146655634 - L1 LINE L1 -2490 3656 2605 5584 147 44 17 chr2 104032217 104033596 -146654258 + L1MA5A LINE L1 6138 7565 -151 * 2035 157 30 28 chr2 104033596 104033959 -146653895 + THE1B LTR MaLR 1 364 0 5584 147 44 17 chr2 104033959 104034111 -146653743 + L1MA5A LINE L1 7565 7711 -5 208 217 17 17 chr2 104034447 104034507 -146653347 + (TA)n Simple_repeat Simple_repeat 1 60 0 9151 174 86 43 chr2 104034973 104037160 -146650694 + L1MC1 LINE L1 20 2298 -4128 1433 66 0 6 chr2 104037162 104037345 -146650509 + AluY SINE Alu 112 293 -18 3164 241 36 17 chr2 104037360 104038425 -146649429 + L1MC1 LINE L1 2369 3415 -3011 4732 241 99 32 chr2 104038438 104040313 -146647541 + L1MC1 LINE L1 3515 5514 -912 468 222 11 6 chr2 104040322 104040498 -146647356 + (TA)n Simple_repeat Simple_repeat 2 178 0 1506 186 9 68 chr2 104040498 104040522 -146647332 + L1MC1 LINE L1 5602 5626 -987 8477 117 25 6 chr2 104040522 104041781 -146646073 - HSMAR1 DNA Mariner 0 1287 4 1506 186 9 68 chr2 104041781 104041903 -146645951 + L1MC1 LINE L1 5626 5754 -859 254 119 24 0 chr2 104041903 104041945 -146645909 - MADE1 DNA Mariner -36 44 2 1506 186 9 68 chr2 104041945 104042211 -146645643 + L1MC1 LINE L1 5754 5991 -622 16408 213 23 7 chr2 104042216 104047115 -146640739 - L1PA13 LINE L1 -11 7590 2625 6530 261 36 21 chr2 104047127 104048754 -146639100 - L1PA13 LINE L1 -5925 1656 6 1582 154 18 0 chr2 104048761 104049034 -146638820 + L1MC1 LINE L1 5986 6263 -350 928 228 100 36 chr2 104049018 104049457 -146638397 + L1MEc LINE L1 611 1077 -5319 * 1522 251 131 13 chr2 104049465 104050364 -146637490 + L1MEc LINE L1 1754 2732 -3483 * 5477 226 76 73 chr2 104050361 104051168 -146636686 + L1MD1 LINE L1 526 1329 -5211 258 32 0 0 chr2 104051168 104051199 -146636655 + (CA)n Simple_repeat Simple_repeat 2 32 0 5477 226 76 73 chr2 104051199 104052223 -146635631 + L1MD1 LINE L1 1329 2364 -4176 1895 134 0 39 chr2 104052223 104052529 -146635325 + AluSx SINE Alu 1 294 -18 5477 226 76 73 chr2 104052529 104052854 -146635000 + L1MD1 LINE L1 2364 2686 -3854 337 254 33 0 chr2 104052867 104052989 -146634865 + L1MD1 LINE L1 2722 2847 -3693 996 162 140 35 chr2 104052989 104053217 -146634637 + MER44D DNA MER2_type 1 522 -87 4496 138 39 34 chr2 104053219 104054070 -146633784 - Tigger3b DNA MER2_type -371 860 6 1141 96 6 6 chr2 104054120 104054286 -146633568 + MER30 DNA MER1_type 1 166 -64 747 132 7 25 chr2 104054301 104054454 -146633400 + L1MC/D LINE L1 5378 5523 -637 1034 288 50 11 chr2 104054472 104054947 -146632907 + L1MD1 LINE L1 5047 5540 -1000 2978 201 64 15 chr2 104054955 104055686 -146632168 + L1MD1 LINE L1 5764 6530 -106 285 211 0 0 chr2 104055694 104055751 -146632103 + L1MD2 LINE L1 6290 6346 -13 27 73 0 0 chr2 104055832 104055887 -146631967 + AT_rich Low_complexity Low_complexity 1 55 0 2546 234 50 51 chr2 104055900 104057034 -146630820 + L1ME1 LINE L1 4972 6293 -41 225 268 18 0 chr2 104057071 104057127 -146630727 + CT-rich Low_complexity Low_complexity 1 57 0 2221 105 0 3 chr2 104057295 104057590 -146630264 - AluSg SINE Alu -16 294 1 247 333 62 33 chr2 104058282 104058522 -146629332 + L2 LINE L2 2824 3070 -202 6318 206 51 27 chr2 104058527 104060162 -146627692 - L1MC1 LINE L1 -122 7938 6277 1020 194 24 0 chr2 104060160 104060387 -146627467 - L1MC1 LINE L1 -743 5683 5516 * 1444 234 176 26 chr2 104060390 104061172 -146626682 - L1MC1 LINE L1 -955 5471 4572 618 245 72 33 chr2 104061197 104061556 -146626298 - L1MC1 LINE L1 -5018 1408 1036 530 246 163 48 chr2 104061559 104061811 -146626043 - L1MB8 LINE L1 -13 6165 5885 * 872 241 5 5 chr2 104061807 104062014 -146625840 - L1M4c LINE L1 -4684 1962 1756 2367 212 32 34 chr2 104062025 104062561 -146625293 - L1M4c LINE L1 -5041 1501 965 2008 120 7 3 chr2 104062561 104062853 -146625001 - AluSq SINE Alu -20 293 1 2367 212 32 34 chr2 104062853 104063029 -146624825 - L1M4c LINE L1 -5577 965 790 1099 132 0 6 chr2 104063107 104063266 -146624588 - AluSx SINE Alu -150 162 5 520 232 21 35 chr2 104063742 104063884 -146623970 - MLT1H LTR MaLR -391 158 19 484 300 50 29 chr2 104068020 104068260 -146619594 - MARNA DNA Mariner -126 460 216 336 24 0 0 chr2 104069055 104069096 -146618758 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 82 0 0 chr2 104069263 104069312 -146618542 + AT_rich Low_complexity Low_complexity 1 49 0 2085 127 40 20 chr2 104069423 104069777 -146618077 + MER46B DNA MER2_type 1 236 0 21 57 0 0 chr2 104069908 104069943 -146617911 + AT_rich Low_complexity Low_complexity 1 35 0 30 0 0 0 chr2 104070221 104070251 -146617603 + AT_rich Low_complexity Low_complexity 1 30 0 26 82 0 0 chr2 104070418 104070479 -146617375 + AT_rich Low_complexity Low_complexity 1 61 0 2784 10 0 0 chr2 104070522 104070823 -146617031 - AluYa5 SINE Alu -9 302 2 6423 132 11 8 chr2 104070841 104071917 -146615937 + L1MA3 LINE L1 5209 6288 -17 2042 93 0 18 chr2 104071974 104072252 -146615602 + AluSc SINE Alu 1 273 -36 193 0 94 0 chr2 104072260 104072292 -146615562 + A-rich Low_complexity Low_complexity 1 35 0 197 354 83 0 chr2 104076190 104076334 -146611520 - MIR SINE MIR -70 192 37 205 259 35 35 chr2 104076892 104076977 -146610877 - L2 LINE L2 0 3313 3229 22 35 0 0 chr2 104081836 104081865 -146605989 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr2 104082346 104082373 -146605481 + (A)n Simple_repeat Simple_repeat 1 27 0 24 85 0 0 chr2 104082961 104083020 -146604834 + AT_rich Low_complexity Low_complexity 1 59 0 960 186 5 5 chr2 104084440 104084634 -146603220 + L1MB3 LINE L1 5987 6180 -3 1719 153 33 13 chr2 104084651 104085127 -146602727 + AluSx SINE Alu 5 486 0 441 54 0 0 chr2 104085143 104085199 -146602655 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 1481 142 145 13 chr2 104085807 104086110 -146601744 + MER61A LTR ERV1 1 343 0 29 28 0 0 chr2 104086805 104086841 -146601013 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr2 104087120 104087150 -146600704 + AT_rich Low_complexity Low_complexity 1 30 0 301 277 62 88 chr2 104089641 104089764 -146598090 - MLT1L LTR MaLR -8 607 482 2073 128 42 31 chr2 104089764 104090124 -146597730 - THE1B LTR MaLR 0 364 1 301 277 62 88 chr2 104090124 104090422 -146597432 - MLT1L LTR MaLR -133 482 197 2229 84 0 23 chr2 104090583 104090892 -146596962 - AluY SINE Alu -9 302 1 1918 176 70 28 chr2 104090926 104091440 -146596414 + MLT2A2 LTR ERVL 1 554 0 279 309 97 24 chr2 104092554 104092719 -146595135 - MIR SINE MIR -75 187 11 1966 204 79 30 chr2 104094942 104095475 -146592379 + MER89 LTR ERV1 1 559 0 272 247 143 78 chr2 104095505 104095659 -146592195 - MIR3 SINE MIR -40 168 5 182 319 32 51 chr2 104095905 104096062 -146591792 + MIR SINE MIR 59 212 -50 2495 67 0 10 chr2 104096967 104097281 -146590573 + AluY SINE Alu 1 311 0 245 258 22 67 chr2 104097785 104097874 -146589980 - MLT1K LTR MaLR -315 273 189 1904 151 3 10 chr2 104099253 104099551 -146588303 - AluJb SINE Alu -16 296 1 240 325 98 95 chr2 104100032 104100441 -146587413 - L2 LINE L2 -1 3271 2862 469 318 90 9 chr2 104100864 104101097 -146586757 + MER46C DNA MER2_type 65 316 -22 522 274 154 16 chr2 104103146 104103364 -146584490 - MIR SINE MIR -3 259 17 467 315 38 25 chr2 104104224 104104462 -146583392 - L2 LINE L2 -177 3136 2896 1906 188 84 19 chr2 104104463 104104913 -146582941 + MLT1D LTR MaLR 1 485 -20 2232 124 48 22 chr2 104104913 104105268 -146582586 + THE1B LTR MaLR 1 364 0 1906 188 84 19 chr2 104105268 104105291 -146582563 + MLT1D LTR MaLR 485 505 0 6478 23 5 3 chr2 104107678 104108469 -146579385 + L1PA3 LINE L1 5384 6155 0 216 217 14 58 chr2 104108688 104108757 -146579097 + MIR SINE MIR 24 89 -119 1856 102 11 22 chr2 104109953 104110227 -146577627 - AluY SINE Alu -18 293 23 522 153 12 0 chr2 104110588 104110673 -146577181 - AluSg/x SINE Alu -19 290 205 273 308 120 38 chr2 104110885 104111018 -146576836 - MIR SINE MIR -98 164 21 218 309 79 32 chr2 104111817 104111943 -146575911 - L2 LINE L2 -1 3271 3140 511 231 62 87 chr2 104112238 104112433 -146575421 - MIR SINE MIR -71 191 2 7655 205 8 15 chr2 104113673 104115698 -146572156 - L1P5 LINE L1 -714 5437 3431 266 236 0 14 chr2 104115711 104115783 -146572071 - L1ME LINE L1 -297 5867 5797 2334 211 15 20 chr2 104115890 104116429 -146571425 + MLT1D-int LTR MaLR 227 762 -973 1654 242 27 6 chr2 104116664 104117140 -146570714 + L1M4 LINE L1 4642 5127 -1019 339 261 0 22 chr2 104117141 104117233 -146570621 + L1MC4 LINE L1 6614 6703 -1339 258 180 0 0 chr2 104117259 104117320 -146570534 + (TA)n Simple_repeat Simple_repeat 2 62 0 270 81 0 0 chr2 104117355 104117392 -146570462 + (TG)n Simple_repeat Simple_repeat 2 38 0 213 36 0 0 chr2 104117392 104117414 -146570440 + (TA)n Simple_repeat Simple_repeat 2 23 0 213 39 0 0 chr2 104117414 104117440 -146570414 + (CA)n Simple_repeat Simple_repeat 2 27 0 368 333 56 20 chr2 104119484 104119682 -146568172 - MIR SINE MIR 0 262 58 728 246 16 16 chr2 104119736 104119919 -146567935 - MER5A DNA MER1_type -3 186 4 202 129 0 0 chr2 104121178 104121209 -146566645 + MIR SINE MIR 207 237 -25 233 125 0 42 chr2 104121525 104121573 -146566281 + (GGGAA)n Simple_repeat Simple_repeat 5 50 0 243 0 0 0 chr2 104122640 104122667 -146565187 + (TC)n Simple_repeat Simple_repeat 1 27 0 246 170 19 19 chr2 104124128 104124181 -146563673 + (TG)n Simple_repeat Simple_repeat 2 54 0 605 296 122 4 chr2 104128028 104128258 -146559596 - MIR SINE MIR 0 262 6 28 29 0 0 chr2 104128479 104128514 -146559340 + AT_rich Low_complexity Low_complexity 1 35 0 389 309 40 72 chr2 104136203 104136426 -146551428 + MIR SINE MIR 47 262 0 216 163 0 0 chr2 104137142 104137185 -146550669 + A-rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr2 104137936 104137957 -146549897 + (TC)n Simple_repeat Simple_repeat 2 22 0 585 332 4 18 chr2 104138335 104138474 -146549380 - MIR SINE MIR -27 235 99 2061 174 8 3 chr2 104138474 104138837 -146549017 - MLT1A1 LTR MaLR 0 365 1 585 332 4 18 chr2 104138837 104138923 -146548931 - MIR SINE MIR -163 99 13 30 89 0 0 chr2 104139586 104139665 -146548189 + AT_rich Low_complexity Low_complexity 1 79 0 867 257 50 44 chr2 104140324 104140939 -146546915 + L1MDa LINE L1 2190 2815 -3725 213 115 94 0 chr2 104140947 104141043 -146546811 + (TA)n Simple_repeat Simple_repeat 2 106 0 3309 226 37 109 chr2 104141159 104142518 -146545336 + L1M4 LINE L1 3560 4740 -1406 1404 214 28 62 chr2 104142518 104142560 -146545294 + MLT1A2 LTR MaLR 1 43 -331 2234 112 3 0 chr2 104142560 104142854 -146545000 + AluSx SINE Alu 1 295 -17 1404 214 28 62 chr2 104142854 104143198 -146544656 + MLT1A2 LTR MaLR 43 374 0 3309 226 37 109 chr2 104143198 104143778 -146544076 + L1M4 LINE L1 4740 5360 -786 9789 118 9 4 chr2 104143805 104145273 -146542581 + THE1A-int LTR MaLR 106 1580 0 2356 111 8 0 chr2 104145273 104145625 -146542229 + THE1A LTR MaLR 1 355 0 4615 140 4 0 chr2 104145625 104146377 -146541477 + L1PA15 LINE L1 5404 6158 -7 519 305 28 16 chr2 104146371 104146689 -146541165 + L1MD1 LINE L1 4944 5265 -881 * 18724 192 31 8 chr2 104146713 104149354 -146538500 + L1PA13 LINE L1 1 2579 -4235 1755 173 3 3 chr2 104149354 104149670 -146538184 + AluJb SINE Alu 1 316 0 18724 192 31 8 chr2 104149670 104153644 -146534210 + L1PA13 LINE L1 2579 6779 -35 4268 182 57 18 chr2 104153660 104154612 -146533242 + L1MD1 LINE L1 5254 6242 0 591 296 82 31 chr2 104154618 104154909 -146532945 - L2 LINE L2 -529 2785 2480 202 291 18 0 chr2 104155022 104155077 -146532777 + L2 LINE L2 2965 3020 -252 636 298 29 11 chr2 104155408 104155617 -146532237 - MIR SINE MIR -2 260 50 230 247 0 41 chr2 104156353 104156450 -146531404 + L1MC4 LINE L1 6613 6705 -1337 246 32 0 0 chr2 104156495 104156526 -146531328 + (CA)n Simple_repeat Simple_repeat 1 31 0 873 177 24 6 chr2 104157615 104157798 -146530056 - MER39B LTR ERV1 0 622 451 41906 59 3 1 chr2 104157836 104163965 -146523889 + L1PA4 LINE L1 11 6152 -3 21 36 0 0 chr2 104164401 104164429 -146523425 + AT_rich Low_complexity Low_complexity 1 28 0 225 65 0 0 chr2 104164836 104164867 -146522987 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 30 0 0 0 chr2 104165667 104165697 -146522157 + AT_rich Low_complexity Low_complexity 1 30 0 742 284 31 18 chr2 104166000 104166229 -146521625 + MIR SINE MIR 6 237 -25 570 324 24 19 chr2 104166665 104166872 -146520982 - MIR SINE MIR -26 236 29 197 178 22 0 chr2 104168226 104168271 -146519583 + CT-rich Low_complexity Low_complexity 2 47 0 328 268 141 7 chr2 104168533 104168675 -146519179 - MARNA DNA Mariner -187 399 239 186 338 50 43 chr2 104168918 104169057 -146518797 + L2 LINE L2 3133 3272 0 254 372 97 13 chr2 104169545 104169634 -146518220 + MIR SINE MIR 2 82 -180 188 35 35 0 chr2 104169634 104169663 -146518191 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 254 372 97 13 chr2 104169663 104169799 -146518055 + MIR SINE MIR 82 246 -16 831 242 52 30 chr2 104170348 104170533 -146517321 + MIR SINE MIR 19 211 -51 757 260 77 0 chr2 104170533 104170741 -146517113 + MER58A DNA MER1_type 1 224 0 831 242 52 30 chr2 104170741 104170786 -146517068 + MIR SINE MIR 211 254 -8 551 302 95 9 chr2 104171028 104171260 -146516594 + L2 LINE L2 2185 2436 -878 2204 106 3 0 chr2 104171381 104171674 -146516180 - AluSq SINE Alu -19 294 1 477 34 0 0 chr2 104171768 104171827 -146516027 + (CA)n Simple_repeat Simple_repeat 2 60 0 440 108 12 48 chr2 104172256 104172282 -146515572 - MADE1 DNA Mariner 0 80 55 2391 88 0 0 chr2 104172282 104172588 -146515266 - AluY SINE Alu -5 306 1 440 108 12 48 chr2 104172588 104172644 -146515210 - MADE1 DNA Mariner -25 55 1 2262 118 0 0 chr2 104172799 104173130 -146514724 - L1PA8 LINE L1 -2052 4094 3764 7998 129 14 7 chr2 104173130 104175197 -146512657 + L1PA8 LINE L1 4087 6165 -7 360 374 41 0 chr2 104175307 104175454 -146512400 - MIR SINE MIR -53 209 57 1715 224 39 10 chr2 104176762 104177177 -146510677 + MER90 LTR ERV1 4 430 -145 1631 75 5 0 chr2 104177193 104177407 -146510447 - L1PA13 LINE L1 -20 6143 5929 650 198 0 45 chr2 104177407 104177564 -146510290 + L1P LINE L1 4464 4613 -1533 402 220 106 30 chr2 104177566 104177698 -146510156 + MER90 LTR ERV1 473 614 0 189 347 113 8 chr2 104177827 104177951 -146509903 - MIR SINE MIR -91 171 35 2123 124 26 59 chr2 104179842 104180230 -146507624 + THE1C LTR MaLR 1 375 0 1993 133 0 43 chr2 104181001 104181324 -146506530 + AluSx SINE Alu 1 309 -3 368 271 15 45 chr2 104183885 104184018 -146503836 + L2 LINE L2 3185 3313 0 1755 212 8 57 chr2 104184969 104185445 -146502409 + L1MA9 LINE L1 5823 6275 -37 24 91 0 0 chr2 104189365 104189431 -146498423 + AT_rich Low_complexity Low_complexity 1 66 0 307 247 193 24 chr2 104190450 104190616 -146497238 + MIR3 SINE MIR 9 202 -6 180 279 162 97 chr2 104190987 104191141 -146496713 - MIR3 SINE MIR -35 173 10 977 113 0 0 chr2 104191922 104192055 -146495799 + AluJb SINE Alu 1 133 -179 360 59 0 0 chr2 104192279 104192330 -146495524 + (CA)n Simple_repeat Simple_repeat 1 51 0 1738 209 42 52 chr2 104193352 104193859 -146493995 - MLT1E3 LTR MaLR 0 624 35 268 328 105 56 chr2 104194020 104194429 -146493425 + L2 LINE L2 2176 2604 -710 1063 109 0 0 chr2 104195322 104195469 -146492385 + L1PA8 LINE L1 3982 4128 -2018 6205 112 2 3 chr2 104195469 104196861 -146490993 + L1PA8 LINE L1 4773 6163 -9 270 312 9 55 chr2 104196877 104196986 -146490868 + L2 LINE L2 3197 3300 -13 221 200 0 0 chr2 104197148 104197188 -146490666 - MIR SINE MIR -112 150 111 222 37 0 0 chr2 104198924 104198951 -146488903 + (GA)n Simple_repeat Simple_repeat 2 28 0 184 184 26 0 chr2 104200184 104200222 -146487632 + MER5A DNA MER1_type 149 187 -2 231 304 116 0 chr2 104201355 104201467 -146486387 + MER103 DNA DNA 40 164 -2 242 106 21 0 chr2 104203486 104203533 -146484321 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 982 307 57 28 chr2 104204108 104205015 -146482839 - L1ME3 LINE L1 -300 5845 4920 1726 269 45 13 chr2 104205022 104205491 -146482363 - LTR40a LTR ERVL -32 487 4 338 300 82 66 chr2 104205588 104206560 -146481294 - L1ME3 LINE L1 -3024 3105 2118 263 209 23 23 chr2 104206560 104206646 -146481208 + T-rich Low_complexity Low_complexity 2 87 0 273 221 19 114 chr2 104206754 104206912 -146480942 + HERV16 LTR ERVL 4574 4716 -280 550 310 83 39 chr2 104207236 104207646 -146480208 + LTR16B LTR ERVL 35 462 -2 1186 290 90 9 chr2 104207663 104208118 -146479736 - MER119 DNA MER1_type -62 521 30 24 0 0 0 chr2 104208181 104208205 -146479649 + AT_rich Low_complexity Low_complexity 1 24 0 3510 156 28 11 chr2 104208206 104208855 -146478999 - L1MC1 LINE L1 -2 6331 5672 288 325 147 0 chr2 104208915 104209078 -146478776 - L1ME3 LINE L1 -5491 628 442 183 80 0 0 chr2 104209369 104209394 -146478460 + (TG)n Simple_repeat Simple_repeat 2 26 0 237 128 0 0 chr2 104209439 104209486 -146478368 + (T)n Simple_repeat Simple_repeat 1 47 0 199 316 31 88 chr2 104209738 104209931 -146477923 + L2 LINE L2 2077 2258 -1056 33 43 0 0 chr2 104211050 104211097 -146476757 + AT_rich Low_complexity Low_complexity 1 47 0 208 328 0 0 chr2 104212402 104212460 -146475394 + MIR SINE MIR 91 148 -114 213 65 0 0 chr2 104212554 104212585 -146475269 + (TG)n Simple_repeat Simple_repeat 1 31 0 339 85 0 0 chr2 104212585 104212632 -146475222 + (GA)n Simple_repeat Simple_repeat 2 48 0 229 321 48 0 chr2 104212969 104213053 -146474801 - MIR SINE MIR -61 147 60 1154 196 78 60 chr2 104213638 104214021 -146473833 - MLT1B LTR MaLR 0 390 1 2824 48 3 6 chr2 104214478 104214831 -146473023 + L1PA7 LINE L1 5751 6102 -52 847 303 93 16 chr2 104214851 104215303 -146472551 + L1MEd LINE L1 78 564 -5555 260 186 41 41 chr2 104215316 104215413 -146472441 + L1MEd LINE L1 742 838 -5281 * 465 199 4 0 chr2 104215400 104215497 -146472357 - L1M4 LINE L1 -567 5607 5508 21 0 0 0 chr2 104216115 104216136 -146471718 + AT_rich Low_complexity Low_complexity 1 21 0 1689 150 0 4 chr2 104216188 104216434 -146471420 + AluSx SINE Alu 39 283 -29 333 185 0 0 chr2 104216434 104216499 -146471355 + (TA)n Simple_repeat Simple_repeat 2 66 0 573 281 168 37 chr2 104216564 104216624 -146471230 - MLT1I LTR MaLR -3 406 355 558 0 0 0 chr2 104216624 104216686 -146471168 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 573 281 168 37 chr2 104216686 104216977 -146470877 - MLT1I LTR MaLR -54 355 9 2467 64 0 43 chr2 104217076 104217377 -146470477 - L1P3 LINE L1 -376 5778 5492 2179 98 13 35 chr2 104217377 104217692 -146470162 - AluSc SINE Alu -1 308 1 2467 64 0 43 chr2 104217692 104217736 -146470118 - L1P3 LINE L1 -662 5492 5448 200 200 0 0 chr2 104217882 104217917 -146469937 + (CAT)n Simple_repeat Simple_repeat 2 36 0 28 29 0 0 chr2 104218043 104218078 -146469776 + AT_rich Low_complexity Low_complexity 1 35 0 690 292 20 20 chr2 104221589 104221791 -146466063 - MIR SINE MIR -38 224 23 1337 174 135 75 chr2 104224814 104225252 -146462602 + MLT1C LTR MaLR 1 464 -3 203 315 27 14 chr2 104225395 104225468 -146462386 - L2 LINE L2 -202 3070 2997 1355 156 0 0 chr2 104225469 104225681 -146462173 + AluSx SINE Alu 1 212 -100 469 91 0 0 chr2 104225681 104225747 -146462107 + AluSq/x SINE Alu 78 143 -169 1250 219 25 6 chr2 104225848 104226173 -146461681 - L1P4 LINE L1 -344 5821 5491 314 369 11 6 chr2 104226196 104226375 -146461479 + CT-rich Low_complexity Low_complexity 1 180 0 186 209 0 0 chr2 104226395 104226438 -146461416 + CT-rich Low_complexity Low_complexity 3 45 0 396 282 3 59 chr2 104226466 104226723 -146461131 + CT-rich Low_complexity Low_complexity 1 242 0 700 138 0 0 chr2 104226906 104227015 -146460839 + AluSp/q SINE Alu 189 297 -16 208 259 19 0 chr2 104227589 104227643 -146460211 + MIR SINE MIR 206 260 -2 2250 91 0 44 chr2 104227769 104228087 -146459767 + AluY SINE Alu 1 304 -7 232 288 174 63 chr2 104228520 104229010 -146458844 + L2 LINE L2 1479 2022 -1292 313 329 35 54 chr2 104229203 104229516 -146458338 + L2 LINE L2 2111 2417 -897 195 314 54 32 chr2 104229734 104229919 -146457935 + L2 LINE L2 3123 3311 -2 383 271 41 29 chr2 104230568 104230738 -146457116 - HAL1 LINE L1 -38 2469 2298 24 32 0 0 chr2 104230843 104230874 -146456980 + AT_rich Low_complexity Low_complexity 1 31 0 490 305 74 55 chr2 104231071 104231912 -146455942 - L1MEd LINE L1 -4331 1979 1095 351 44 0 0 chr2 104231912 104231957 -146455897 + (CA)n Simple_repeat Simple_repeat 2 46 0 490 305 74 55 chr2 104231957 104232085 -146455769 - L1MEd LINE L1 -5215 1095 971 210 91 0 0 chr2 104232257 104232290 -146455564 + (T)n Simple_repeat Simple_repeat 1 33 0 324 417 56 14 chr2 104232539 104232683 -146455171 - MER91A DNA MER1_type -22 174 25 1386 99 9 19 chr2 104233439 104233650 -146454204 - AluY SINE Alu -2 309 101 305 241 11 11 chr2 104234129 104234216 -146453638 - L1MC/D LINE L1 -1986 5822 5736 362 251 40 111 chr2 104234620 104234819 -146453035 - LTR68 LTR ERV1 -292 448 264 444 198 0 0 chr2 104235122 104235203 -146452651 + MLT1D LTR MaLR 250 330 -175 1939 144 171 32 chr2 104235225 104235635 -146452219 + LTR24 LTR ERV1 1 467 0 1051 236 18 4 chr2 104235658 104235887 -146451967 + L1ME1 LINE L1 581 812 -5730 * 4025 260 62 33 chr2 104235886 104237134 -146450720 + L1ME1 LINE L1 3823 5034 -1630 2378 68 0 10 chr2 104237134 104237428 -146450426 - AluY SINE Alu -6 305 15 4025 260 62 33 chr2 104237428 104238841 -146449013 + L1ME1 LINE L1 5034 6574 -90 1012 215 12 27 chr2 104238907 104239163 -146448691 + L1MD3 LINE L1 7734 7985 -10 2325 112 0 0 chr2 104239848 104240160 -146447694 + AluSx SINE Alu 1 312 0 1208 248 147 2 chr2 104240507 104240914 -146446940 + LTR41 LTR ERVL 1 466 -307 1906 132 14 3 chr2 104241016 104241304 -146446550 + AluSx SINE Alu 5 295 -17 230 355 37 0 chr2 104241316 104241423 -146446431 - MER94 DNA DNA 0 134 24 212 0 36 0 chr2 104241528 104241556 -146446298 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2222 126 0 0 chr2 104242017 104242327 -146445527 + AluSx SINE Alu 1 310 -2 635 75 11 0 chr2 104248010 104248104 -146439750 + (TAGA)n Simple_repeat Simple_repeat 2 96 0 1051 182 31 49 chr2 104250799 104251024 -146436830 - MER106A DNA MER1_type -15 221 1 22 0 0 0 chr2 104254342 104254364 -146433490 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 104254881 104254909 -146432945 + AT_rich Low_complexity Low_complexity 1 28 0 317 24 24 0 chr2 104255140 104255182 -146432672 + (CA)n Simple_repeat Simple_repeat 1 43 0 290 304 40 24 chr2 104256307 104256432 -146431422 + L2 LINE L2 3182 3308 -5 7937 97 8 3 chr2 104258444 104260430 -146427424 - L1PA7 LINE L1 -3 6151 4204 1298 126 0 5 chr2 104260430 104260621 -146427233 + L1PA7 LINE L1 4025 4214 -1932 1997 144 3 6 chr2 104260933 104261246 -146426608 - AluSx SINE Alu 0 312 1 231 88 0 0 chr2 104261704 104261738 -146426116 + (T)n Simple_repeat Simple_repeat 1 34 0 243 191 21 0 chr2 104264620 104264667 -146423187 + MER116 DNA Mariner 1 48 -32 2024 120 33 0 chr2 104264871 104265172 -146422682 - AluSq SINE Alu -2 311 1 1553 186 96 44 chr2 104265529 104266008 -146421846 - MLT1D LTR MaLR 0 505 2 451 300 81 24 chr2 104266051 104266298 -146421556 + L2 LINE L2 3001 3261 -52 221 156 67 0 chr2 104266476 104266521 -146421333 - L2 LINE L2 -5 3308 3261 2424 57 0 0 chr2 104267987 104268284 -146419570 + AluY SINE Alu 1 297 -14 23 0 0 0 chr2 104268675 104268698 -146419156 + AT_rich Low_complexity Low_complexity 1 23 0 4928 75 37 0 chr2 104268993 104269669 -146418185 - L1PA8 LINE L1 -4 6168 5468 691 309 27 36 chr2 104269692 104269993 -146417861 - L1ME1 LINE L1 -6 6160 5863 34 0 0 0 chr2 104270005 104270039 -146417815 + AT_rich Low_complexity Low_complexity 1 34 0 28 61 0 0 chr2 104270444 104270493 -146417361 + AT_rich Low_complexity Low_complexity 1 49 0 5241 201 63 11 chr2 104270987 104272261 -146415593 - L1MC2 LINE L1 -16 6608 5244 1771 241 131 16 chr2 104272318 104272713 -146415141 - L1MC2 LINE L1 -1447 4979 4631 198 91 0 0 chr2 104272713 104272746 -146415108 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1580 128 0 0 chr2 104272749 104272967 -146414887 - AluSg/x SINE Alu -30 282 65 1771 241 131 16 chr2 104272967 104273209 -146414645 - L1MC2 LINE L1 -1796 4630 4264 * 3711 218 57 32 chr2 104273206 104274341 -146413513 - L1MC2 LINE L1 -2937 3489 2383 213 39 0 0 chr2 104274341 104274367 -146413487 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 3711 218 57 32 chr2 104274367 104274920 -146412934 - L1MC2 LINE L1 -4043 2383 1754 834 185 27 0 chr2 104274920 104275066 -146412788 - FRAM SINE Alu -14 152 3 3711 218 57 32 chr2 104275066 104275134 -146412720 - L1MC2 LINE L1 -4672 1754 1689 1823 157 42 3 chr2 104275141 104275456 -146412398 - L1PA15 LINE L1 -24 6141 5820 441 207 23 0 chr2 104275460 104275547 -146412307 - FRAM SINE Alu -24 152 64 319 55 0 109 chr2 104275547 104275602 -146412252 - L1P4 LINE L1 -324 5839 5791 2838 184 10 17 chr2 104275705 104276445 -146411409 - L1PA15 LINE L1 -696 5469 4737 1435 259 90 53 chr2 104276446 104276504 -146411350 - L1MC2 LINE L1 -5737 689 635 1352 205 92 12 chr2 104276504 104276850 -146411004 + MLT1A2 LTR MaLR 1 374 0 1435 259 90 53 chr2 104276850 104277291 -146410563 - L1MC2 LINE L1 -5791 635 158 273 29 0 0 chr2 104277291 104277325 -146410529 + (TC)n Simple_repeat Simple_repeat 1 34 0 1435 259 90 53 chr2 104277325 104277470 -146410384 - L1MC2 LINE L1 -6268 158 20 207 317 22 115 chr2 104278939 104279122 -146408732 + MIR3 SINE MIR 40 205 -3 14228 143 31 4 chr2 104279551 104281905 -146405949 + Tigger1 DNA MER2_type 3 2418 0 207 169 26 39 chr2 104283075 104283152 -146404702 + (TA)n Simple_repeat Simple_repeat 1 76 0 554 267 19 12 chr2 104284338 104284499 -146403355 - MIR SINE MIR -1 261 100 2310 175 84 22 chr2 104286250 104286279 -146401575 - L1MC3 LINE L1 -9 7776 7750 2082 121 3 0 chr2 104286279 104286576 -146401278 - AluSc SINE Alu -11 298 1 2310 175 84 22 chr2 104286576 104287094 -146400760 - L1MC3 LINE L1 -35 7750 7195 270 307 34 0 chr2 104287098 104287186 -146400668 - MLT1F1 LTR MaLR -442 125 35 531 171 0 0 chr2 104287228 104287333 -146400521 - L1MC3 LINE L1 -748 7037 6933 * 3947 257 51 55 chr2 104287309 104288237 -146399617 - L1MCb LINE L1 -1864 4700 3770 1030 115 6 0 chr2 104288237 104288251 -146399603 - L1PA10 LINE L1 -5 6163 6151 225 0 0 0 chr2 104288251 104288276 -146399578 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 1030 115 6 0 chr2 104288276 104288417 -146399437 - L1PA10 LINE L1 -17 6151 6007 3947 257 51 55 chr2 104288417 104288647 -146399207 - L1MCb LINE L1 -2794 3770 3541 225 0 0 0 chr2 104288647 104288672 -146399182 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 3947 257 51 55 chr2 104288672 104288867 -146398987 - L1MCb LINE L1 -3023 3541 3347 1729 149 0 33 chr2 104288867 104289168 -146398686 + AluSx SINE Alu 1 291 -21 3947 257 51 55 chr2 104289168 104289662 -146398192 - L1MCb LINE L1 -3217 3347 2858 330 182 78 0 chr2 104289658 104289735 -146398119 + L1M4 LINE L1 2513 2595 -3551 * 309 274 18 18 chr2 104289745 104289858 -146397996 - L1MCb LINE L1 -3700 2864 2752 1750 295 48 15 chr2 104289879 104290551 -146397303 - L1MCb LINE L1 -5297 748 55 28 29 0 0 chr2 104290758 104290793 -146397061 + AT_rich Low_complexity Low_complexity 1 35 0 305 61 20 20 chr2 104291179 104291228 -146396626 - L1PA3 LINE L1 -3 6152 6104 396 20 0 0 chr2 104291228 104291258 -146396596 + L1PA3 LINE L1 6104 6152 -3 284 182 0 0 chr2 104292373 104292428 -146395426 + L1PA16 LINE L1 6107 6161 -5 2277 150 37 3 chr2 104292497 104292871 -146394983 - LTR9B LTR ERV1 0 644 258 5710 156 8 46 chr2 104294672 104296473 -146391381 + L1MA4 LINE L1 4559 6291 -9 294 29 0 0 chr2 104296714 104296749 -146391105 + (CA)n Simple_repeat Simple_repeat 1 35 0 257 246 0 0 chr2 104298114 104298171 -146389683 + MER116 DNA Mariner 4 60 -20 1416 239 93 10 chr2 104298247 104298298 -146389556 - MLT2B1 LTR ERVL -2 518 473 627 51 0 0 chr2 104298298 104298377 -146389477 + (TCTA)n Simple_repeat Simple_repeat 2 80 0 1416 239 93 10 chr2 104298377 104298710 -146389144 - MLT2B1 LTR ERVL -47 473 102 1572 250 22 10 chr2 104299473 104299881 -146387973 - L1MC3 LINE L1 -1102 6683 6271 2337 68 3 7 chr2 104299882 104300192 -146387662 + AluY SINE Alu 1 309 -2 1844 227 56 47 chr2 104300197 104300862 -146386992 - L1MCb LINE L1 -1644 4920 4250 1622 145 0 0 chr2 104300862 104301096 -146386758 - AluSx SINE Alu -75 237 4 2471 246 77 67 chr2 104301106 104301283 -146386571 - L1MCb LINE L1 -2501 4063 3889 2240 103 0 10 chr2 104301283 104301585 -146386269 - AluSg SINE Alu -9 301 3 2471 246 77 67 chr2 104301585 104302615 -146385239 - L1MCb LINE L1 -2675 3889 2871 881 226 50 5 chr2 104302615 104302814 -146385040 + MER6B DNA MER2_type 3 210 0 2471 246 77 67 chr2 104302814 104304100 -146383754 - L1MCb LINE L1 -3693 2871 1399 1283 232 97 51 chr2 104304102 104304822 -146383032 - L1MCb LINE L1 -4851 1194 564 880 297 49 76 chr2 104304941 104305530 -146382324 - L1MCb LINE L1 -5469 576 4 33 25 0 0 chr2 104305637 104305677 -146382177 + AT_rich Low_complexity Low_complexity 1 40 0 228 170 94 0 chr2 104306023 104306076 -146381778 + MER103 DNA DNA 11 68 -98 321 266 101 44 chr2 104306290 104306448 -146381406 - MIR SINE MIR -58 204 38 664 229 243 0 chr2 104307027 104307245 -146380609 - L1MD2 LINE L1 -13 6346 6076 534 197 36 62 chr2 104309565 104309758 -146378096 + MER53 DNA DNA 1 188 -1 1428 262 93 31 chr2 104311594 104312079 -146375775 - MLT1F LTR MaLR -3 539 25 23 0 0 0 chr2 104312370 104312393 -146375461 + AT_rich Low_complexity Low_complexity 1 23 0 1032 96 0 0 chr2 104312393 104312570 -146375284 + (TA)n Simple_repeat Simple_repeat 2 178 0 1861 53 19 1 chr2 104312936 104313236 -146374618 - L1PA7 LINE L1 -713 5441 5139 5302 71 21 0 chr2 104313236 104313926 -146373928 + L1PA7 LINE L1 5436 6153 -1 1715 131 0 34 chr2 104314047 104314314 -146373540 + AluSp SINE Alu 18 275 -38 27 0 0 0 chr2 104316085 104316112 -146371742 + AT_rich Low_complexity Low_complexity 1 27 0 1889 188 11 8 chr2 104316437 104316799 -146371055 + MLT1A1 LTR MaLR 1 363 -2 2571 51 0 3 chr2 104318476 104318788 -146369066 - AluY SINE Alu 0 311 1 1287 70 29 0 chr2 104319119 104319290 -146368564 - AluY SINE Alu -3 308 133 288 0 0 0 chr2 104320060 104320092 -146367762 + (TG)n Simple_repeat Simple_repeat 2 33 0 212 288 0 0 chr2 104320949 104321015 -146366839 + A-rich Low_complexity Low_complexity 2 67 0 2208 93 199 5 chr2 104322870 104323247 -146364607 + LTR7 LTR ERV1 1 450 0 194 79 0 26 chr2 104323679 104323717 -146364137 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 1756 157 0 17 chr2 104324743 104325030 -146362824 + AluSx SINE Alu 28 309 -3 538 191 8 69 chr2 104325030 104325161 -146362693 + FLAM_A SINE Alu 1 123 -10 716 281 25 5 chr2 104326088 104326287 -146361567 + MIR SINE MIR 41 243 -19 193 167 0 0 chr2 104326442 104326472 -146361382 + L2 LINE L2 3264 3293 -20 190 294 0 0 chr2 104326742 104326793 -146361061 + MIR3 SINE MIR 157 207 -1 22 35 0 0 chr2 104326993 104327022 -146360832 + AT_rich Low_complexity Low_complexity 1 29 0 320 274 133 0 chr2 104327971 104328084 -146359770 - MIR SINE MIR -38 224 97 2151 121 0 0 chr2 104329307 104329604 -146358250 - AluSx SINE Alu -9 303 7 1544 172 69 40 chr2 104331235 104331613 -146356241 + MLT1B LTR MaLR 1 389 -1 369 0 0 0 chr2 104331728 104331769 -146356085 + (CA)n Simple_repeat Simple_repeat 1 41 0 240 86 0 0 chr2 104332739 104332774 -146355080 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1415 194 36 12 chr2 104334155 104334490 -146353364 - L1MB7 LINE L1 0 6184 5842 10543 169 14 11 chr2 104334491 104335642 -146352212 + L1PB1 LINE L1 3008 4154 -1997 2074 151 0 0 chr2 104335642 104335954 -146351900 + AluSq SINE Alu 1 312 -1 10543 169 14 11 chr2 104335954 104336722 -146351132 + L1PB1 LINE L1 4154 4918 -1233 1808 168 7 3 chr2 104336722 104337020 -146350834 + AluSx SINE Alu 1 299 -13 10543 169 14 11 chr2 104337020 104338231 -146349623 + L1PB1 LINE L1 4918 6149 -2 1712 186 40 75 chr2 104338230 104338885 -146348969 - L1MD2 LINE L1 -492 5692 5266 * 1216 252 69 62 chr2 104339208 104339727 -146348127 - MLT1E2 LTR MaLR 0 626 104 408 328 99 0 chr2 104339790 104339961 -146347893 - MLT1-int LTR MaLR -487 884 697 1774 161 0 7 chr2 104340112 104340447 -146347407 + AluJo SINE Alu 1 333 0 1266 256 24 35 chr2 104340456 104340881 -146346973 - MLT1-int LTR MaLR -760 611 192 1362 220 118 24 chr2 104340915 104341396 -146346458 - MER39 LTR ERV1 0 707 5 301 238 48 9 chr2 104341500 104341605 -146346249 - MER117 DNA MER1_type -32 165 57 1367 258 102 70 chr2 104341848 104342191 -146345663 - HAL1b LINE L1 -21 1327 996 770 244 12 6 chr2 104342191 104342363 -146345491 - FAM SINE Alu -2 173 1 1367 258 102 70 chr2 104342363 104343235 -146344619 - HAL1b LINE L1 -352 996 73 2196 228 34 95 chr2 104343363 104343979 -146343875 - L1ME1 LINE L1 0 6166 5514 1015 47 31 0 chr2 104343979 104344107 -146343747 + L1PA3 LINE L1 6021 6152 -3 2196 228 34 95 chr2 104344107 104344779 -146343075 - L1ME1 LINE L1 -652 5514 4963 2170 112 7 0 chr2 104344779 104345082 -146342772 - AluY SINE Alu -6 305 1 2196 228 34 95 chr2 104345082 104345181 -146342673 - L1ME1 LINE L1 -1203 4963 4860 987 215 56 18 chr2 104345195 104345534 -146342320 - L1ME1 LINE L1 -1652 4494 4143 213 39 0 0 chr2 104345607 104345633 -146342221 + (CA)n Simple_repeat Simple_repeat 2 27 0 471 147 83 108 chr2 104345652 104345695 -146342159 + MER53 DNA DNA 37 80 -109 2179 86 14 7 chr2 104345695 104345986 -146341868 - AluSx SINE Alu -19 293 1 471 147 83 108 chr2 104345986 104346099 -146341755 + MER53 DNA DNA 80 189 0 183 215 0 0 chr2 104346353 104346418 -146341436 + CT-rich Low_complexity Low_complexity 2 66 0 647 151 6 17 chr2 104346429 104346601 -146341253 + CT-rich Low_complexity Low_complexity 1 170 0 1885 122 51 0 chr2 104346670 104346966 -146340888 - AluSq SINE Alu -2 311 1 237 65 0 0 chr2 104349081 104349112 -146338742 + (CA)n Simple_repeat Simple_repeat 2 32 0 300 294 49 71 chr2 104349728 104349912 -146337942 - MIR SINE MIR -36 226 47 240 35 0 0 chr2 104350004 104350033 -146337821 + (TAA)n Simple_repeat Simple_repeat 3 31 0 2237 125 0 0 chr2 104350205 104350517 -146337337 - AluSx SINE Alu 0 312 1 274 298 24 0 chr2 104352773 104352857 -146334997 + MIR SINE MIR 88 173 -89 1895 184 8 19 chr2 104353219 104353588 -146334266 - MLT1A1 LTR MaLR 0 365 1 573 209 17 51 chr2 104354233 104354410 -146333444 - MER104 DNA Tc2 -4 176 6 237 159 0 0 chr2 104354747 104354791 -146333063 + (TG)n Simple_repeat Simple_repeat 2 45 0 22 35 0 0 chr2 104356181 104356210 -146331644 + AT_rich Low_complexity Low_complexity 1 29 0 699 244 29 12 chr2 104357794 104357966 -146329888 - MLT1A1 LTR MaLR -190 175 1 297 350 39 0 chr2 104358176 104358279 -146329575 + HERVL LTR ERVL 1950 2056 -3598 4376 179 48 9 chr2 104358552 104359492 -146328362 - L1MB7 LINE L1 -2 6182 5188 2727 142 19 37 chr2 104359499 104360034 -146327820 - L1MA9 LINE L1 -6 6306 5782 200 217 22 0 chr2 104360034 104360080 -146327774 + (TATG)n Simple_repeat Simple_repeat 4 50 0 2537 195 44 45 chr2 104360082 104360578 -146327276 - L1MA9 LINE L1 -524 5788 5293 228 35 0 0 chr2 104360578 104360607 -146327247 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 2537 195 44 45 chr2 104360607 104361225 -146326629 - L1MA9 LINE L1 -1019 5293 4680 2678 256 56 48 chr2 104361226 104362317 -146325537 - L1M4 LINE L1 -3855 2355 1275 2074 137 0 19 chr2 104362317 104362631 -146325223 - AluSx SINE Alu -3 309 2 2678 256 56 48 chr2 104362631 104364128 -146323726 - L1M4 LINE L1 -4935 1275 2 538 309 101 47 chr2 104364197 104364624 -146323230 + HERVL LTR ERVL 2475 2924 -2840 1484 306 84 52 chr2 104364872 104365399 -146322455 + HERVL LTR ERVL 3285 3856 -1908 2160 135 120 5 chr2 104365399 104365783 -146322071 + MSTA LTR MaLR 1 428 0 1484 306 84 52 chr2 104365783 104366168 -146321686 + HERVL LTR ERVL 3856 4227 -1537 1350 205 0 26 chr2 104366218 104366486 -146321368 - AluJo SINE Alu -17 295 35 2214 175 25 68 chr2 104366550 104366855 -146320999 + MLT2C2 LTR ERVL 1 279 -185 2223 103 0 29 chr2 104366855 104367165 -146320689 - AluSx SINE Alu -11 301 1 2214 175 25 68 chr2 104367165 104367344 -146320510 + MLT2C2 LTR ERVL 279 464 0 2630 270 71 8 chr2 104367372 104368647 -146319207 + ERVL-C2 LTR ERVL 42 1470 -4294 388 300 18 18 chr2 104368690 104368833 -146319021 - ERVL LTR ERVL -370 5284 5163 424 299 40 58 chr2 104369067 104369341 -146318513 - MLT1C LTR MaLR -198 269 1 506 230 32 91 chr2 104369341 104369438 -146318416 - L1MC/D LINE L1 -349 5815 5774 2127 125 0 7 chr2 104369438 104369756 -146318098 - AluSx SINE Alu 0 312 1 506 230 32 91 chr2 104369756 104369893 -146317961 - L1MC/D LINE L1 -390 5774 5630 * 901 260 109 7 chr2 104369884 104370188 -146317666 - L1MEc LINE L1 -5984 412 78 236 310 0 17 chr2 104371016 104371132 -146316722 + (TA)n Simple_repeat Simple_repeat 1 114 0 1105 186 152 14 chr2 104371186 104371240 -146316614 + MER7A DNA MER2_type 31 76 -2953 2245 109 0 3 chr2 104371240 104371544 -146316310 + AluSq SINE Alu 1 303 -10 1105 186 152 14 chr2 104371544 104371784 -146316070 + MER7A DNA MER2_type 76 337 0 22 0 0 0 chr2 104372038 104372060 -146315794 + AT_rich Low_complexity Low_complexity 1 22 0 836 122 0 0 chr2 104372060 104372183 -146315671 + AluSp/q SINE Alu 183 305 -8 1755 177 0 3 chr2 104373966 104374260 -146313594 - AluJb SINE Alu -18 294 2 205 363 53 50 chr2 104374798 104375079 -146312775 + L2 LINE L2 2927 3208 -64 31 44 0 0 chr2 104375583 104375628 -146312226 + AT_rich Low_complexity Low_complexity 1 45 0 23 33 0 0 chr2 104375855 104375885 -146311969 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 104375930 104375954 -146311900 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr2 104376026 104376056 -146311798 + AT_rich Low_complexity Low_complexity 1 30 0 2261 88 3 0 chr2 104376447 104376732 -146311122 + AluY SINE Alu 1 286 -25 320 303 0 0 chr2 104376755 104376844 -146311010 + L1MC4 LINE L1 6614 6702 -1340 317 290 0 21 chr2 104376868 104376961 -146310893 + L1MC4 LINE L1 6613 6703 -1339 * 329 241 0 17 chr2 104376913 104377032 -146310822 - L1MCa LINE L1 -1337 6985 1995 963 118 0 0 chr2 104377033 104377272 -146310582 + (TA)n Simple_repeat Simple_repeat 1 239 0 354 181 80 43 chr2 104377403 104377541 -146310313 - L1M4 LINE L1 -789 5357 5215 236 336 88 24 chr2 104378328 104378453 -146309401 - L2 LINE L2 -1 3271 3139 881 286 4 8 chr2 104378791 104379025 -146308829 + MIR SINE MIR 20 252 -10 441 0 0 0 chr2 104379057 104379106 -146308748 + (TG)n Simple_repeat Simple_repeat 2 50 0 364 351 74 10 chr2 104379307 104379509 -146308345 + L2 LINE L2 3095 3309 -4 587 315 93 9 chr2 104380261 104380477 -146307377 - MIR SINE MIR -28 234 1 1821 221 79 14 chr2 104382314 104382884 -146304970 - MER97a DNA MER1_type? -105 789 183 1449 141 14 95 chr2 104383144 104383475 -146304379 + MLT1B LTR MaLR 77 496 -9 2408 35 0 3 chr2 104383974 104384281 -146303573 + AluY SINE Alu 1 306 0 2040 109 14 14 chr2 104384381 104384675 -146303179 + AluSq SINE Alu 1 294 -19 510 73 109 0 chr2 104384675 104384944 -146302910 + (TA)n Simple_repeat Simple_repeat 1 298 0 34 0 0 0 chr2 104384944 104384978 -146302876 + AT_rich Low_complexity Low_complexity 1 34 0 746 58 83 10 chr2 104384978 104385484 -146302370 + (TA)n Simple_repeat Simple_repeat 1 723 0 308 137 39 0 chr2 104385496 104385598 -146302256 + (TA)n Simple_repeat Simple_repeat 2 107 0 486 231 56 121 chr2 104385764 104386102 -146301752 + L1ME3 LINE L1 5761 6076 -86 204 40 0 0 chr2 104386468 104386493 -146301361 + (TC)n Simple_repeat Simple_repeat 1 25 0 343 306 69 81 chr2 104386590 104386763 -146301091 + MER5B DNA MER1_type 1 171 -7 299 303 59 53 chr2 104386891 104387043 -146300811 - MLT1J2 LTR MaLR -24 426 274 186 335 131 18 chr2 104387259 104387480 -146300374 + L2 LINE L2 2232 2477 -837 1530 169 0 4 chr2 104387651 104387894 -146299960 - AluJb SINE Alu -12 300 59 401 222 128 0 chr2 104388429 104388546 -146299308 + MER105 DNA DNA 27 158 -46 228 35 0 0 chr2 104389895 104389924 -146297930 + (CA)n Simple_repeat Simple_repeat 2 30 0 1141 209 43 48 chr2 104389977 104390375 -146297479 + Charlie1 DNA MER1_type 2361 2756 -5 2520 52 3 0 chr2 104390569 104390877 -146296977 + AluY SINE Alu 1 309 -2 207 329 0 14 chr2 104392033 104392106 -146295748 - L2 LINE L2 0 3272 3201 334 212 0 0 chr2 104392179 104392245 -146295609 - MLT1I LTR MaLR 0 409 344 247 167 156 41 chr2 104392250 104392389 -146295465 + MLT1H1 LTR MaLR 1 163 -386 452 167 0 0 chr2 104392693 104392771 -146295083 - AluS SINE Alu -8 304 227 420 278 66 62 chr2 104392804 104393143 -146294711 - MLT1I LTR MaLR -63 346 16 765 235 27 22 chr2 104395420 104395603 -146292251 - MER5A DNA MER1_type -1 188 5 244 213 0 0 chr2 104395797 104395844 -146292010 - MER5A DNA MER1_type 0 189 143 684 272 28 0 chr2 104395961 104396141 -146291713 + MER5A DNA MER1_type 1 185 -4 598 245 90 7 chr2 104396441 104396596 -146291258 + MER5B DNA MER1_type 10 177 -1 934 174 6 29 chr2 104396652 104396824 -146291030 - AluJb SINE Alu -10 302 135 404 319 50 16 chr2 104396985 104397167 -146290687 + L3 LINE CR1 1384 1571 -6 262 289 54 48 chr2 104397432 104397598 -146290256 + L2 LINE L2 2236 2402 -912 339 290 38 46 chr2 104397674 104397881 -146289973 + MLT1H LTR MaLR 103 300 -109 333 0 0 0 chr2 104398234 104398271 -146289583 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 857 196 0 0 chr2 104398275 104398418 -146289436 + FRAM SINE Alu 4 146 -30 198 0 0 0 chr2 104398421 104398443 -146289411 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 24 0 0 0 chr2 104398564 104398588 -146289266 + AT_rich Low_complexity Low_complexity 1 24 0 239 359 6 6 chr2 104398591 104398750 -146289104 - L1MC5 LINE L1 -492 7469 7311 915 269 157 58 chr2 104398933 104399499 -146288355 - L1MC5 LINE L1 -1869 5939 5318 21 36 0 0 chr2 104399551 104399579 -146288275 + AT_rich Low_complexity Low_complexity 1 28 0 757 315 115 39 chr2 104399766 104400490 -146287364 - L1MC5 LINE L1 -2527 3619 2841 208 262 0 16 chr2 104401214 104401275 -146286579 + A-rich Low_complexity Low_complexity 1 60 0 1010 267 45 32 chr2 104401460 104401835 -146286019 + L1MDa LINE L1 34 413 -6127 273 119 0 0 chr2 104403354 104403396 -146284458 + (T)n Simple_repeat Simple_repeat 1 42 0 208 148 93 0 chr2 104403996 104404050 -146283804 + A-rich Low_complexity Low_complexity 2 60 0 261 0 0 0 chr2 104407536 104407565 -146280289 + (TG)n Simple_repeat Simple_repeat 2 30 0 795 246 14 29 chr2 104408400 104408607 -146279247 + MER20 DNA MER1_type 16 219 0 22 35 0 0 chr2 104409253 104409282 -146278572 + AT_rich Low_complexity Low_complexity 1 29 0 2078 116 10 14 chr2 104409906 104410200 -146277654 - AluSp SINE Alu -20 293 1 215 296 86 0 chr2 104410415 104410496 -146277358 + MIR SINE MIR 157 244 -18 183 80 0 0 chr2 104410947 104410972 -146276882 + (A)n Simple_repeat Simple_repeat 1 25 0 2340 61 0 0 chr2 104411457 104411750 -146276104 + AluY SINE Alu 1 293 -18 355 256 33 8 chr2 104411935 104412056 -146275798 + (TA)n Simple_repeat Simple_repeat 2 125 0 210 37 0 0 chr2 104412060 104412087 -146275767 + (TG)n Simple_repeat Simple_repeat 2 28 0 24 77 0 0 chr2 104412436 104412488 -146275366 + AT_rich Low_complexity Low_complexity 1 52 0 283 270 122 89 chr2 104413415 104413752 -146274102 + L2 LINE L2 2925 3272 0 2234 215 36 34 chr2 104414187 104414740 -146273114 + MLT2B3 LTR ERVL 1 554 0 404 224 75 19 chr2 104415050 104415211 -146272643 - Charlie7 DNA MER1_type -3 2609 2440 528 265 34 39 chr2 104415213 104415447 -146272407 + L1MC4 LINE L1 7271 7503 -539 * 3597 194 56 60 chr2 104415443 104416786 -146271068 + L1M4 LINE L1 4159 5489 -695 539 282 89 48 chr2 104416840 104417177 -146270677 + L1MC4 LINE L1 7692 8042 0 28 0 0 0 chr2 104418391 104418419 -146269435 + AT_rich Low_complexity Low_complexity 1 28 0 277 333 8 0 chr2 104418471 104418588 -146269266 + L1MC4 LINE L1 7912 8029 -13 1681 192 0 0 chr2 104418611 104418887 -146268967 - AluJo SINE Alu -36 276 1 205 200 186 0 chr2 104419256 104419326 -146268528 - MIR SINE MIR -99 163 81 1511 233 188 0 chr2 104419419 104419840 -146268014 - MLT1D LTR MaLR 0 505 6 229 244 0 0 chr2 104419861 104419902 -146267952 + HAL1 LINE L1 779 819 -1688 428 291 114 61 chr2 104419919 104420358 -146267496 + HAL1 LINE L1 1144 1635 -872 1195 237 41 46 chr2 104420358 104420725 -146267129 + MLT1A1 LTR MaLR 1 365 0 428 291 114 61 chr2 104420725 104420986 -146266868 + HAL1 LINE L1 1635 1881 -626 403 206 0 0 chr2 104421030 104421103 -146266751 - MER5A DNA MER1_type -113 76 4 516 279 85 6 chr2 104421124 104421393 -146266461 + LTR16C LTR ERVL 96 437 -54 2762 3 0 0 chr2 104421836 104422133 -146265721 - AluYa5 SINE Alu -14 297 1 344 363 30 18 chr2 104422801 104422969 -146264885 + MIR3 SINE MIR 23 192 -16 2547 160 7 10 chr2 104423156 104423568 -146264286 + MSTB1 LTR MaLR 9 419 -13 2940 242 78 35 chr2 104423717 104424269 -146263585 + L1MCb LINE L1 1 527 -5705 2394 88 0 19 chr2 104424269 104424586 -146263268 + AluY SINE Alu 1 311 0 2940 242 78 35 chr2 104424586 104425349 -146262505 + L1MCb LINE L1 527 1383 -4849 487 207 112 0 chr2 104425351 104425520 -146262334 + L1MCb LINE L1 2341 2528 -4036 240 224 20 51 chr2 104425542 104425564 -146262290 - MER53 DNA DNA -12 177 156 2345 74 3 0 chr2 104425564 104425861 -146261993 - AluY SINE Alu -13 298 1 240 224 20 51 chr2 104425861 104425936 -146261918 - MER53 DNA DNA -33 156 83 4023 268 56 12 chr2 104425943 104427650 -146260204 + L1MCb LINE L1 2536 4321 -2243 3841 135 18 6 chr2 104427653 104428281 -146259573 - MER41B LTR ERV1 0 635 1 4355 100 24 6 chr2 104428281 104428910 -146258944 - MER41B-int LTR ERV1 -2 5944 5305 33538 84 5 9 chr2 104428912 104434478 -146253376 - L1PA6 LINE L1 -2 6152 611 526 116 70 0 chr2 104434481 104434567 -146253287 - MER41B-int LTR ERV1 -526 4489 4398 1803 83 35 96 chr2 104434606 104434919 -146252935 - MER41B-int LTR ERV1 -698 5248 4955 * 6730 203 100 78 chr2 104434904 104437125 -146250729 - MER41B-int LTR ERV1 -1963 4300 2008 2192 112 0 35 chr2 104437125 104437439 -146250415 - AluY SINE Alu -8 303 1 6730 203 100 78 chr2 104437439 104437933 -146249921 - MER41B-int LTR ERV1 -4255 2008 1526 4701 125 15 3 chr2 104437935 104438617 -146249237 - MER41B-int LTR ERV1 -5256 690 1 4386 107 9 0 chr2 104438617 104439246 -146248608 - MER41B LTR ERV1 0 635 1 2853 282 23 11 chr2 104439252 104440389 -146247465 + L1MCb LINE L1 4328 5516 -1048 677 189 89 0 chr2 104440388 104440557 -146247297 + L1MC3 LINE L1 7598 7781 -4 * 416 204 37 80 chr2 104440557 104440719 -146247135 - MER53 DNA DNA -12 177 23 2495 69 0 0 chr2 104440728 104441032 -146246822 - AluY SINE Alu -7 304 1 783 261 138 40 chr2 104441711 104442140 -146245714 + L2 LINE L2 2843 3313 0 3288 118 9 41 chr2 104442510 104443067 -146244787 + HSMAR2 DNA Mariner 2 540 -762 8101 146 29 8 chr2 104443169 104444488 -146243366 + Tigger2 DNA MER2_type 1373 2718 0 26 50 0 0 chr2 104444522 104444562 -146243292 + AT_rich Low_complexity Low_complexity 1 40 0 318 219 66 49 chr2 104444589 104444772 -146243082 - L1MC5 LINE L1 -178 7783 7598 4306 148 10 15 chr2 104444898 104445620 -146242234 + HSMAR2 DNA Mariner 585 1302 0 22 0 0 0 chr2 104445892 104445914 -146241940 + AT_rich Low_complexity Low_complexity 1 22 0 1241 270 89 44 chr2 104447525 104448044 -146239810 + MLT1F LTR MaLR 1 542 0 1970 159 129 5 chr2 104448116 104448488 -146239366 + MSTA LTR MaLR 11 428 0 6744 145 39 2 chr2 104448529 104449669 -146238185 + Tigger2 DNA MER2_type 1 1182 -1536 490 246 58 23 chr2 104450082 104450253 -146237601 - L1MC5 LINE L1 -745 7216 7040 459 278 43 25 chr2 104450315 104450477 -146237377 - L1MC4 LINE L1 -1064 6978 6814 23 0 0 0 chr2 104450732 104450755 -146237099 + AT_rich Low_complexity Low_complexity 1 23 0 204 40 0 0 chr2 104450944 104450969 -146236885 + (T)n Simple_repeat Simple_repeat 1 25 0 520 262 55 91 chr2 104451957 104452232 -146235622 + L1ME3 LINE L1 3264 3528 -2618 2297 57 0 0 chr2 104453275 104453558 -146234296 + AluY SINE Alu 1 283 -28 24 77 0 0 chr2 104455429 104455481 -146232373 + AT_rich Low_complexity Low_complexity 1 52 0 239 182 18 12 chr2 104456124 104456196 -146231658 + L1MD1 LINE L1 6175 6359 0 1309 223 98 123 chr2 104456376 104457223 -146230631 + L1ME3 LINE L1 5333 6162 0 295 77 0 0 chr2 104457267 104457306 -146230548 - AluSx SINE Alu -8 294 256 1421 139 5 0 chr2 104457307 104457515 -146230339 - AluSx SINE Alu -103 209 1 874 54 0 0 chr2 104457574 104457685 -146230169 - AluY SINE Alu -5 306 196 246 32 0 0 chr2 104458207 104458238 -146229616 + (CA)n Simple_repeat Simple_repeat 2 32 0 2128 127 0 7 chr2 104459190 104459489 -146228365 - AluSx SINE Alu -15 297 1 1875 122 0 62 chr2 104459957 104460261 -146227593 + AluSx SINE Alu 1 285 -27 322 385 26 21 chr2 104460263 104460455 -146227399 - MIR SINE MIR -16 246 54 5286 110 25 1 chr2 104460980 104461783 -146226071 - L1PA13 LINE L1 0 6163 5342 3585 275 14 11 chr2 104461784 104462598 -146225256 + L1P LINE L1 4276 5091 -1055 210 241 83 182 chr2 104462702 104462955 -146224899 + MIR SINE MIR 23 250 -12 192 40 0 0 chr2 104463692 104463717 -146224137 + (CA)n Simple_repeat Simple_repeat 2 26 0 443 371 16 16 chr2 104463837 104464023 -146223831 - MER5A DNA MER1_type 0 189 4 202 311 0 16 chr2 104464121 104464182 -146223672 - MIR3 SINE MIR -48 160 101 370 345 136 5 chr2 104464197 104464403 -146223451 - MIR SINE MIR 0 262 30 731 309 47 8 chr2 104464442 104464678 -146223176 - MIR SINE MIR -6 256 12 1769 144 112 9 chr2 104464817 104465156 -146222698 + THE1C LTR MaLR 1 374 -1 1242 239 74 35 chr2 104466265 104466340 -146221514 - L1ME3A LINE L1 0 6239 6168 228 86 0 0 chr2 104466340 104466375 -146221479 + (TA)n Simple_repeat Simple_repeat 1 35 0 1242 239 74 35 chr2 104466375 104466784 -146221070 - L1ME3A LINE L1 -71 6168 5738 1158 126 11 6 chr2 104466784 104466967 -146220887 + MLT2B1 LTR ERVL 1 184 -336 4644 260 92 37 chr2 104466968 104471260 -146216594 - L1P5 LINE L1 -657 5888 1832 2299 102 5 81 chr2 104471260 104471644 -146216210 - THE1A LTR MaLR 0 355 1 4644 260 92 37 chr2 104471644 104472425 -146215429 - L1P5 LINE L1 -4713 1832 1095 360 0 0 0 chr2 104472425 104472465 -146215389 + (TG)n Simple_repeat Simple_repeat 1 40 0 4644 260 92 37 chr2 104472465 104472540 -146215314 - L1P5 LINE L1 -5450 1095 21 1333 207 40 34 chr2 104472574 104472897 -146214957 + MLT1B LTR MaLR 1 325 -65 234 246 58 0 chr2 104472996 104473065 -146214789 + MLT1B LTR MaLR 302 374 0 1568 259 101 33 chr2 104473068 104474040 -146213814 - L1ME3A LINE L1 -843 5372 4335 301 336 67 22 chr2 104474663 104474797 -146213057 + L1ME LINE L1 5296 5435 -686 3280 35 2 5 chr2 104475120 104475524 -146212330 - L1PA4 LINE L1 -8 6147 5745 4296 42 0 0 chr2 104475525 104476222 -146211632 + L1PA4 LINE L1 5074 5770 -385 3759 253 121 29 chr2 104476253 104476631 -146211223 - L1MEc LINE L1 -1969 4246 3904 216 0 0 0 chr2 104476631 104476655 -146211199 + (TA)n Simple_repeat Simple_repeat 2 25 0 3759 253 121 29 chr2 104476655 104478271 -146209583 - L1MEc LINE L1 -2311 3904 2086 1076 281 90 28 chr2 104478366 104479034 -146208820 - L1MEc LINE L1 -4610 1786 1078 678 184 24 0 chr2 104479046 104479171 -146208683 - FLAM_C SINE Alu -13 130 3 2238 276 53 58 chr2 104479191 104480196 -146207658 - L1MEc LINE L1 -5320 1076 77 385 148 78 0 chr2 104480204 104480346 -146207508 + (TA)n Simple_repeat Simple_repeat 1 153 0 181 393 0 33 chr2 104481998 104482120 -146205734 - MIR SINE MIR -94 168 51 315 348 57 71 chr2 104482220 104482556 -146205298 + L2 LINE L2 2941 3271 -1 191 283 80 26 chr2 104484643 104484756 -146203098 - L2 LINE L2 -559 2755 2637 2341 107 0 3 chr2 104486088 104486396 -146201458 - AluSx SINE Alu -4 308 2 1269 206 69 26 chr2 104487836 104488233 -146199621 + MER54B LTR ERVL 475 792 -1 238 279 77 77 chr2 104488778 104488839 -146199015 - L1ME1 LINE L1 -4 6162 6102 2375 47 7 7 chr2 104488839 104489137 -146198717 - AluY SINE Alu -13 298 1 238 279 77 77 chr2 104489137 104489283 -146198571 - L1ME1 LINE L1 -63 6103 5955 1492 41 20 0 chr2 104489310 104489506 -146198348 - L1P2 LINE L1 -682 5472 5273 4804 185 60 27 chr2 104489508 104491939 -146195915 - L1PB3 LINE L1 -7 6147 3515 1957 177 25 21 chr2 104491939 104492379 -146195475 + MLT2A2 LTR ERVL 1 450 -104 7388 37 8 0 chr2 104492386 104493399 -146194455 - L1PA4 LINE L1 -1 6154 5141 421 20 0 0 chr2 104493399 104493449 -146194405 - L1P LINE L1 -955 5191 5142 * 647 13 0 0 chr2 104493447 104493523 -146194331 + L1P LINE L1 5049 5124 -1022 898 106 0 0 chr2 104493523 104493646 -146194208 + MLT2A2 LTR ERVL 331 453 0 1268 181 46 0 chr2 104493665 104493946 -146193908 - L1PB3 LINE L1 -2647 3499 3206 665 219 14 0 chr2 104493950 104494096 -146193758 - L1PA16 LINE L1 -6 6217 6070 2877 203 24 1 chr2 104494115 104495079 -146192775 - L1PA16 LINE L1 -522 5701 4724 645 149 4 36 chr2 104495080 104495343 -146192511 - AluJb SINE Alu -7 305 3 1904 190 21 64 chr2 104495385 104495894 -146191960 - L1PA16 LINE L1 -5219 985 1 1155 251 80 7 chr2 104496212 104496653 -146191201 - L1ME LINE L1 -473 5625 5149 1192 288 24 27 chr2 104496934 104497555 -146190299 - L1ME LINE L1 -1030 5050 4432 1165 249 39 61 chr2 104497541 104497741 -146190113 - L1ME LINE L1 -1990 4090 3887 * 5731 66 3 1 chr2 104497741 104498482 -146189372 - L1PA7 LINE L1 -5 6149 5408 1165 249 39 61 chr2 104498482 104498742 -146189112 - L1ME LINE L1 -2193 3887 3640 282 322 82 21 chr2 104498760 104498993 -146188861 - L1ME LINE L1 -5767 303 57 436 147 15 0 chr2 104499007 104499075 -146188779 - L1PA16 LINE L1 -419 5747 5679 2138 155 30 0 chr2 104499078 104499440 -146188414 + L1PA16 LINE L1 5760 6132 -34 208 259 0 0 chr2 104499719 104499773 -146188081 + A-rich Low_complexity Low_complexity 1 54 0 26 93 0 0 chr2 104499819 104499894 -146187960 + AT_rich Low_complexity Low_complexity 1 75 0 25 51 0 0 chr2 104500007 104500046 -146187808 + AT_rich Low_complexity Low_complexity 1 39 0 5301 166 16 15 chr2 104500215 104501096 -146186758 - L1MA7 LINE L1 -3 6288 5403 2171 117 3 0 chr2 104501096 104501396 -146186458 - AluSc SINE Alu -8 301 1 5301 166 16 15 chr2 104501396 104501569 -146186285 - L1MA7 LINE L1 -888 5403 5232 331 291 92 26 chr2 104501841 104502068 -146185786 + L1M4 LINE L1 4599 4840 -1306 1355 126 5 0 chr2 104502152 104502358 -146185496 - L1PA8 LINE L1 -3 6169 5963 1256 229 16 33 chr2 104502395 104502701 -146185153 + AluJo SINE Alu 3 303 -9 475 129 9 7 chr2 104503912 104504001 -146183853 - MLT1D LTR MaLR 0 505 378 22 0 0 0 chr2 104504083 104504105 -146183749 + AT_rich Low_complexity Low_complexity 1 22 0 191 233 0 14 chr2 104504197 104504270 -146183584 + A-rich Low_complexity Low_complexity 1 72 0 185 307 161 42 chr2 104504270 104504462 -146183392 - MIR SINE MIR 0 262 48 5602 110 21 8 chr2 104505714 104506541 -146181313 - L1PA10 LINE L1 0 6168 5332 1366 150 83 75 chr2 104506536 104506756 -146181098 + L1P LINE L1 2923 3149 -2997 * 405 0 0 0 chr2 104506756 104506801 -146181053 + (CA)n Simple_repeat Simple_repeat 2 46 0 1366 150 83 75 chr2 104506801 104506940 -146180914 + L1P LINE L1 3149 3285 -2861 37 76 0 0 chr2 104507023 104507102 -146180752 + AT_rich Low_complexity Low_complexity 1 79 0 23 0 0 0 chr2 104507240 104507263 -146180591 + AT_rich Low_complexity Low_complexity 1 23 0 2332 87 0 7 chr2 104507263 104507573 -146180281 - AluY SINE Alu -3 308 1 2075 189 67 57 chr2 104508200 104508707 -146179147 + MER73 LTR ERVL 1 512 -132 189 0 0 0 chr2 104508714 104508735 -146179119 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 755 178 8 0 chr2 104508954 104509083 -146178771 + MSTB1 LTR MaLR 303 432 0 12897 175 29 49 chr2 104509101 104514938 -146172916 - L1 LINE L1 -1128 6437 16 722 197 138 112 chr2 104515104 104515460 -146172394 - MLT1A1 LTR MaLR 0 365 1 29 0 0 0 chr2 104515586 104515615 -146172239 + AT_rich Low_complexity Low_complexity 1 29 0 229 341 0 80 chr2 104515851 104515989 -146171865 + MER5B DNA MER1_type 36 162 -16 1589 143 0 40 chr2 104516125 104516440 -146171414 + AluSx SINE Alu 21 324 0 326 328 58 26 chr2 104516602 104516791 -146171063 + L1MEc LINE L1 919 1113 -5283 226 288 36 55 chr2 104516810 104517029 -146170825 + L1MEc LINE L1 1122 1336 -4879 2188 94 0 7 chr2 104517307 104517614 -146170240 + AluY SINE Alu 1 305 -6 570 243 21 0 chr2 104517638 104517782 -146170072 + L1MB4 LINE L1 13 159 -6383 324 306 63 20 chr2 104518045 104518285 -146169569 + L1MB4 LINE L1 459 936 -5710 1039 136 95 32 chr2 104518574 104518795 -146169059 - THE1C LTR MaLR 0 375 141 8829 130 36 58 chr2 104518810 104520426 -146167428 - THE1C-int LTR MaLR 0 1580 1 2025 131 52 30 chr2 104520426 104520793 -146167061 - THE1C LTR MaLR 0 375 1 368 163 47 23 chr2 104520808 104520894 -146166960 + L1MB4 LINE L1 1016 1103 -5543 661 206 7 7 chr2 104520922 104521058 -146166796 + AluJb SINE Alu 159 294 -18 1853 245 93 80 chr2 104521079 104521470 -146166384 + L1MB4 LINE L1 1141 1525 -5119 1970 151 0 3 chr2 104521470 104521775 -146166079 + AluSc SINE Alu 3 306 -3 1853 245 93 80 chr2 104521775 104522067 -146165787 + L1MB4 LINE L1 1525 1812 -4832 7414 35 1 1 chr2 104522067 104522996 -146164858 + L1PA4 LINE L1 5220 6152 -3 1853 245 93 80 chr2 104522996 104523940 -146163914 + L1MB4 LINE L1 1812 2788 -3856 1838 272 43 18 chr2 104523945 104524685 -146163169 + L1MB4 LINE L1 2725 3483 -3161 * 3686 243 34 16 chr2 104524680 104526675 -146161179 + L1MB4 LINE L1 4622 6661 -17 183 129 0 0 chr2 104526675 104526706 -146161148 + (TATATG)n Simple_repeat Simple_repeat 5 35 0 186 103 0 0 chr2 104526708 104526737 -146161117 + (CA)n Simple_repeat Simple_repeat 2 30 0 1016 205 58 20 chr2 104527285 104527578 -146160276 + L1M4 LINE L1 5100 5403 -743 1091 253 77 16 chr2 104527591 104527903 -146159951 - MLT1C LTR MaLR -2 465 135 467 224 31 0 chr2 104527903 104528001 -146159853 + L1M4 LINE L1 5447 5547 -627 425 168 0 74 chr2 104528001 104528096 -146159758 - MLT1B LTR MaLR -171 219 132 3130 217 14 3 chr2 104528096 104528811 -146159043 + L1MB5 LINE L1 5444 6166 -8 3336 209 88 29 chr2 104528838 104529483 -146158371 + L1MC3 LINE L1 6763 7484 -301 2525 56 0 0 chr2 104529483 104529787 -146158067 - AluY SINE Alu -5 306 3 3336 209 88 29 chr2 104529787 104530100 -146157754 + L1MC3 LINE L1 7484 7777 -8 6152 78 46 0 chr2 104531298 104532364 -146155490 - L1PA10 LINE L1 0 6168 5111 1754 103 36 4 chr2 104532364 104532645 -146155209 + L1P5 LINE L1 5343 5632 -519 3875 97 25 18 chr2 104532765 104533243 -146154611 + L1PB1 LINE L1 5542 6026 -125 2163 122 0 0 chr2 104533243 104533555 -146154299 + AluSq SINE Alu 1 312 -1 3875 97 25 18 chr2 104533555 104533682 -146154172 + L1PB1 LINE L1 6026 6151 0 22 0 0 0 chr2 104534048 104534070 -146153784 + AT_rich Low_complexity Low_complexity 1 22 0 4264 200 19 33 chr2 104534145 104535646 -146152208 - L1MB7 LINE L1 -14 6668 5197 227 267 47 52 chr2 104535647 104535838 -146152016 - L1MB7 LINE L1 -1661 4983 4794 2849 273 87 13 chr2 104535843 104537423 -146150431 - L1MB7 LINE L1 -1933 4711 2955 2364 211 22 4 chr2 104537523 104537974 -146149880 + MER66B LTR ERV1 28 486 0 877 255 167 29 chr2 104537974 104538492 -146149362 - L1MB7 LINE L1 -3805 2839 2394 219 69 0 0 chr2 104538492 104538521 -146149333 + (CA)n Simple_repeat Simple_repeat 1 29 0 877 255 167 29 chr2 104538521 104538864 -146148990 - L1MB7 LINE L1 -4250 2394 1837 2074 246 11 94 chr2 104538873 104539617 -146148237 - L1MB7 LINE L1 -5852 690 9 372 304 94 12 chr2 104540119 104540290 -146147564 + L1MEc LINE L1 798 982 -5414 215 243 0 14 chr2 104540497 104540571 -146147283 + CT-rich Low_complexity Low_complexity 4 76 0 25 0 0 0 chr2 104542015 104542040 -146145814 + AT_rich Low_complexity Low_complexity 1 25 0 1255 195 130 0 chr2 104542515 104542777 -146145077 + AluJb SINE Alu 1 296 -16 202 184 0 41 chr2 104542797 104542812 -146145042 + GA-rich Low_complexity Low_complexity 1 15 -32 2188 112 0 13 chr2 104542812 104543306 -146144548 + AluSg SINE Alu 1 310 0 202 184 0 41 chr2 104543306 104543339 -146144515 + GA-rich Low_complexity Low_complexity 15 47 0 420 143 0 0 chr2 104543340 104543410 -146144444 + AluS SINE Alu 231 300 -1 206 61 0 30 chr2 104543410 104543443 -146144411 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 287 312 135 14 chr2 104544260 104544401 -146143453 + MIR SINE MIR 41 198 -64 207 279 0 13 chr2 104544598 104544677 -146143177 + (TAA)n Simple_repeat Simple_repeat 2 79 0 1057 137 0 0 chr2 104546261 104546407 -146141447 - AluSg SINE Alu -163 147 2 254 223 57 102 chr2 104546409 104546566 -146141288 - L1ME1 LINE L1 -220 5946 5797 355 227 136 81 chr2 104546590 104546863 -146140991 - L1ME1 LINE L1 -578 5586 5299 28 29 0 0 chr2 104546892 104546927 -146140927 + AT_rich Low_complexity Low_complexity 1 35 0 405 163 58 0 chr2 104547003 104547089 -146140765 - L1MC2 LINE L1 -8 6336 6246 246 326 67 48 chr2 104547464 104547734 -146140120 + L3 LINE CR1 740 1014 -563 213 373 119 0 chr2 104547950 104548084 -146139770 + L3 LINE CR1 1409 1558 -19 21 0 0 0 chr2 104548088 104548109 -146139745 + AT_rich Low_complexity Low_complexity 1 21 0 555 161 58 32 chr2 104548109 104548264 -146139590 - Looper DNA T2_type -2 1556 1398 1010 246 55 28 chr2 104548280 104548902 -146138952 - Looper DNA T2_type -598 960 252 5704 63 148 110 chr2 104548951 104550080 -146137774 + MER11A LTR ERVK 1 1266 0 10643 225 35 33 chr2 104550080 104551187 -146136667 + L1PA16 LINE L1 1409 2512 -4305 2027 134 76 17 chr2 104551187 104551531 -146136323 + THE1B LTR MaLR 1 364 0 11042 111 4 11 chr2 104551531 104553122 -146134732 + THE1B-int LTR MaLR 1 1580 0 2002 139 75 20 chr2 104553122 104553467 -146134387 + THE1B LTR MaLR 1 364 0 10643 225 35 33 chr2 104553467 104557805 -146130049 + L1PA16 LINE L1 2511 6801 -16 688 226 35 13 chr2 104557824 104558050 -146129804 - Looper DNA T2_type -1304 254 24 23 33 0 0 chr2 104558149 104558179 -146129675 + AT_rich Low_complexity Low_complexity 1 30 0 226 221 39 52 chr2 104558633 104558710 -146129144 - MLT1F1 LTR MaLR -185 357 282 279 299 120 25 chr2 104558756 104558932 -146128922 - MLT1F1 LTR MaLR -265 289 87 267 314 0 9 chr2 104560131 104560236 -146127618 - MLT1-int LTR MaLR -843 528 425 218 184 0 0 chr2 104560880 104560918 -146126936 + (TTG)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr2 104561932 104561953 -146125901 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 104562102 104562123 -146125731 + AT_rich Low_complexity Low_complexity 1 21 0 2183 283 74 28 chr2 104563528 104565898 -146121956 + L1ME2 LINE L1 1388 3829 -2386 814 296 150 24 chr2 104565922 104566444 -146121410 + MLT1F1 LTR MaLR 1 549 -18 248 256 237 14 chr2 104566459 104566670 -146121184 + L1ME2 LINE L1 3934 4191 -2024 24 85 0 0 chr2 104566674 104566733 -146121121 + AT_rich Low_complexity Low_complexity 1 59 0 2386 257 74 35 chr2 104566741 104567411 -146120443 + L1ME2 LINE L1 4157 4799 -1434 2574 57 0 0 chr2 104567411 104567710 -146120144 + AluY SINE Alu 2 300 -11 2386 257 74 35 chr2 104567710 104569035 -146118819 + L1ME2 LINE L1 4799 6224 -9 244 206 16 16 chr2 104569372 104569435 -146118419 + (TA)n Simple_repeat Simple_repeat 2 64 0 2058 224 18 11 chr2 104570535 104570977 -146116877 - MER74A LTR ERVL 0 558 114 237 317 81 50 chr2 104571796 104571957 -146115897 + MLT1H LTR MaLR 382 547 -2 618 225 53 7 chr2 104573274 104573425 -146114429 + MER5A DNA MER1_type 26 183 -6 582 287 29 29 chr2 104573440 104573614 -146114240 - MER5A DNA MER1_type -1 188 15 598 313 95 7 chr2 104573687 104573991 -146113863 + MLT1E2 LTR MaLR 2 332 -292 240 250 0 0 chr2 104574075 104574127 -146113727 + LTR30 LTR ERV1 1 52 -670 2537 128 16 47 chr2 104574138 104574568 -146113286 + LTR12 LTR ERV1 68 484 -230 800 193 114 6 chr2 104574576 104574752 -146113102 + MLT1E2 LTR MaLR 432 626 0 1420 224 0 22 chr2 104574842 104575154 -146112700 - AluJb SINE Alu -7 305 1 198 0 0 0 chr2 104575496 104575518 -146112336 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2529 53 3 0 chr2 104577451 104577754 -146110100 + AluY SINE Alu 1 304 -7 3343 263 64 20 chr2 104578531 104581118 -146106736 + L1M3b LINE L1 2049 4514 -3051 566 223 27 16 chr2 104581732 104581920 -146105934 + L1M3b LINE L1 4495 4684 -2881 4626 202 39 9 chr2 104581921 104582980 -146104874 + L1M3b LINE L1 5078 6167 -1398 1045 181 146 4 chr2 104583987 104584241 -146103613 - AluJo SINE Alu 0 312 23 644 205 93 7 chr2 104584456 104584607 -146103247 - FAM SINE Alu -7 168 5 2539 138 20 9 chr2 104584994 104585526 -146102328 - L1M1 LINE L1 -596 5704 5174 1717 174 51 11 chr2 104585526 104585896 -146101958 + L1MA4 LINE L1 5907 6294 -6 249 329 14 0 chr2 104586657 104586730 -146101124 + L2 LINE L2 2959 3032 -240 306 317 87 25 chr2 104586935 104587096 -146100758 + MIR SINE MIR 74 244 -18 246 133 147 27 chr2 104588064 104588139 -146099715 + L1ME4a LINE L1 6025 6108 -13 714 211 62 0 chr2 104588607 104588768 -146099086 + MER63A DNA MER1_type 1 171 -39 403 196 0 0 chr2 104589189 104589281 -146098573 + L1MCa LINE L1 1819 1910 -4516 23 33 0 0 chr2 104589284 104589314 -146098540 + AT_rich Low_complexity Low_complexity 1 30 0 1566 116 98 14 chr2 104589318 104589595 -146098259 - L1PA10 LINE L1 -4 6164 5865 4089 168 24 11 chr2 104589598 104590385 -146097469 - L1P LINE L1 -2145 4001 3205 2571 37 0 0 chr2 104590398 104590693 -146097161 + AluY SINE Alu 1 295 -16 2220 109 0 37 chr2 104591300 104591621 -146096233 + AluSx SINE Alu 1 309 -3 264 318 154 30 chr2 104592223 104592522 -146095332 - L2 LINE L2 -16 3256 2921 1644 176 24 7 chr2 104594113 104594403 -146093451 + AluSx SINE Alu 3 297 -15 827 263 126 27 chr2 104595480 104595795 -146092059 + MLT1G LTR MaLR 14 296 -299 1861 132 30 79 chr2 104595795 104596188 -146091666 + THE1C LTR MaLR 1 374 -1 827 263 126 27 chr2 104596188 104596339 -146091515 + MLT1G LTR MaLR 296 595 0 279 301 18 62 chr2 104596709 104596822 -146091032 - L2 LINE L2 -15 3298 3191 30994 108 21 61 chr2 104597475 104603884 -146083970 + L1PA7 LINE L1 13 6154 0 320 300 97 11 chr2 104604138 104604317 -146083537 + L1ME4a LINE L1 5220 5411 -768 1504 183 21 11 chr2 104604378 104604663 -146083191 - AluJo SINE Alu -20 292 5 2971 160 32 4 chr2 104604695 104605258 -146082596 - L1MB2 LINE L1 -6 6165 5587 791 262 76 21 chr2 104605312 104605828 -146082026 + L1ME4a LINE L1 5527 6118 -3 780 272 50 93 chr2 104605890 104606485 -146081369 - L2 LINE L2 -3 3310 2753 393 159 0 0 chr2 104606617 104606680 -146081174 - L2 LINE L2 -1860 1454 1392 1600 170 29 55 chr2 104606977 104607289 -146080565 - AluJo SINE Alu -6 306 3 230 319 147 45 chr2 104608168 104608182 -146079672 + L2 LINE L2 2807 2818 -454 2143 107 10 3 chr2 104608182 104608473 -146079381 - AluSx SINE Alu -19 293 1 230 319 147 45 chr2 104608473 104608881 -146078973 + L2 LINE L2 2818 3272 0 380 40 53 27 chr2 104609036 104609111 -146078743 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 520 156 0 64 chr2 104610844 104610953 -146076901 + Ricksha DNA DNA 14 115 -3131 * 6891 133 25 23 chr2 104610936 104611531 -146076323 + Ricksha DNA DNA 1707 2306 -940 2093 99 26 29 chr2 104611531 104611843 -146076011 + AluSx SINE Alu 1 311 -1 6891 133 25 23 chr2 104611843 104612349 -146075505 + Ricksha DNA DNA 2306 2810 -436 1132 153 14 14 chr2 104612363 104612585 -146075269 + Ricksha DNA DNA 3022 3243 -8 676 255 107 49 chr2 104612622 104613069 -146074785 + MLT1G LTR MaLR 51 537 -5 222 133 67 0 chr2 104613193 104613238 -146074616 + CT-rich Low_complexity Low_complexity 3 50 0 285 75 0 0 chr2 104613242 104613282 -146074572 + (CAA)n Simple_repeat Simple_repeat 2 41 0 1259 251 59 74 chr2 104613365 104613839 -146074015 + LTR40a LTR ERVL 1 467 -52 1204 124 0 0 chr2 104613839 104614017 -146073837 - L1MC/D LINE L1 -821 5932 5755 1557 139 60 19 chr2 104614017 104614280 -146073574 - Tigger3(Golem) DNA MER2_type -1 3028 2755 437 38 0 0 chr2 104614280 104614333 -146073521 + MADE1 DNA Mariner 2 54 -26 381 240 0 0 chr2 104614349 104614424 -146073430 - Tigger3(Golem) DNA MER2_type -2954 75 1 268 216 0 0 chr2 104614424 104614475 -146073379 - L1MC/D LINE L1 -880 5756 5706 1036 228 12 4 chr2 104614591 104614846 -146073008 - L1MC/D LINE L1 -893 5647 5391 1475 238 19 9 chr2 104614880 104615200 -146072654 + MLT1B LTR MaLR 66 388 -2 16357 187 73 36 chr2 104615247 104616255 -146071599 - L1P LINE L1 -1610 4536 3566 1461 154 95 39 chr2 104616255 104616540 -146071314 - AluJb SINE Alu -9 303 3 16357 187 73 36 chr2 104616540 104619608 -146068246 - L1P LINE L1 -2580 3566 311 967 256 80 38 chr2 104619753 104620230 -146067624 - L1P LINE L1 -5639 507 11 1829 265 12 45 chr2 104620257 104620985 -146066869 - L1MC/D LINE L1 -3227 3313 2610 530 167 12 0 chr2 104620985 104621069 -146066785 - AluSq/x SINE Alu -197 116 32 874 127 25 0 chr2 104621086 104621244 -146066610 - L1MC/D LINE L1 -4002 2538 2377 285 269 15 0 chr2 104621246 104621313 -146066541 - Tigger1 DNA MER2_type -3 2415 2348 1409 108 5 68 chr2 104621416 104621638 -146066216 - AluSq SINE Alu -105 208 1 10280 152 108 16 chr2 104621639 104622006 -146065848 - Tigger1 DNA MER2_type -331 2087 1755 1973 131 3 0 chr2 104622006 104622317 -146065537 - AluSx SINE Alu 0 314 3 10280 152 108 16 chr2 104622317 104623513 -146064341 - Tigger1 DNA MER2_type -663 1755 314 239 0 32 0 chr2 104623513 104623544 -146064310 + (GA)n Simple_repeat Simple_repeat 1 32 0 10280 152 108 16 chr2 104623544 104623888 -146063966 - Tigger1 DNA MER2_type -2104 314 3 5993 234 74 20 chr2 104623890 104624922 -146062932 - L1MDa LINE L1 -4162 2378 1404 1505 189 0 93 chr2 104624922 104625256 -146062598 + AluJo SINE Alu 1 303 -9 5993 234 74 20 chr2 104625256 104626380 -146061474 - L1MDa LINE L1 -5136 1404 31 192 40 0 0 chr2 104626513 104626538 -146061316 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1400 195 50 34 chr2 104626540 104626838 -146061016 - AluJo SINE Alu -9 303 1 1114 217 116 7 chr2 104627033 104627309 -146060545 + LTR16C LTR ERVL 165 470 -21 579 273 66 11 chr2 104627461 104627644 -146060210 + MIR SINE MIR 53 245 -17 3810 127 23 8 chr2 104628333 104628852 -146059002 + MER1A DNA MER1_type 1 527 0 283 226 38 15 chr2 104628954 104629087 -146058767 + (TA)n Simple_repeat Simple_repeat 2 137 0 2934 225 68 44 chr2 104629089 104629859 -146057995 + MER21B LTR ERV1 16 803 -60 2267 120 0 0 chr2 104630288 104630596 -146057258 + AluSx SINE Alu 1 308 -4 278 280 81 101 chr2 104630916 104631343 -146056511 + HAL1b LINE L1 301 718 -630 2338 170 64 12 chr2 104631343 104631748 -146056106 - MSTB LTR MaLR 0 426 1 278 280 81 101 chr2 104631748 104631817 -146056037 + HAL1b LINE L1 718 787 -561 269 329 112 53 chr2 104632101 104632611 -146055243 + L1M4 LINE L1 3685 4224 -1922 925 199 0 0 chr2 104632746 104632897 -146054957 - FRAM SINE Alu -22 154 4 302 325 88 55 chr2 104632901 104633301 -146054553 + L1M4 LINE L1 4377 4789 -1357 3588 76 21 0 chr2 104633342 104633730 -146054124 + MLT2A1 LTR ERVL 1 400 -44 186 43 0 0 chr2 104633730 104633753 -146054101 + (TATG)n Simple_repeat Simple_repeat 2 24 0 3588 76 21 0 chr2 104633753 104633799 -146054055 + MLT2A1 LTR ERVL 400 444 0 43485 67 13 3 chr2 104633799 104639188 -146048666 + HERVL-A1 LTR ERVL 1 5445 -209 339 85 0 0 chr2 104639296 104639314 -146048540 + (CA)n Simple_repeat Simple_repeat 1 65 0 339 85 0 0 chr2 104639314 104639361 -146048493 + (CA)n Simple_repeat Simple_repeat 2 48 0 2079 75 0 19 chr2 104639396 104639664 -146048190 - AluY SINE Alu -25 286 24 407 21 0 0 chr2 104639664 104639711 -146048143 + MLT2A1 LTR ERVL 398 444 0 2600 58 0 3 chr2 104640511 104640822 -146047032 - AluY SINE Alu -1 310 1 228 184 0 0 chr2 104644304 104644353 -146043501 + CT-rich Low_complexity Low_complexity 4 52 0 936 177 50 6 chr2 104644785 104644966 -146042888 + MER5A DNA MER1_type 1 189 0 24 0 0 0 chr2 104645444 104645468 -146042386 + AT_rich Low_complexity Low_complexity 1 24 0 232 230 40 20 chr2 104646136 104646236 -146041618 + (TA)n Simple_repeat Simple_repeat 1 102 0 500 204 46 107 chr2 104646243 104646459 -146041395 - MER112 DNA MER1_type -9 251 49 418 261 7 63 chr2 104646703 104646730 -146041124 + MIR SINE MIR 97 124 -138 2404 82 0 25 chr2 104646730 104647046 -146040808 - AluY SINE Alu -3 308 1 418 261 7 63 chr2 104647046 104647160 -146040694 + MIR SINE MIR 124 230 -32 182 122 0 146 chr2 104647533 104647553 -146040301 + L3 LINE CR1 1532 1545 -32 1674 212 45 13 chr2 104647553 104647931 -146039923 + MLT1B LTR MaLR 1 390 0 182 122 0 146 chr2 104647931 104647951 -146039903 + L3 LINE CR1 1545 1566 -11 1290 203 67 93 chr2 104648245 104648764 -146039090 + MLT1C LTR MaLR 1 467 0 245 288 12 50 chr2 104648933 104649013 -146038841 - L2 LINE L2 -2 3311 3235 2098 117 7 0 chr2 104649017 104649307 -146038547 + AluSx SINE Alu 1 292 -20 207 0 0 0 chr2 104649781 104649804 -146038050 + (A)n Simple_repeat Simple_repeat 1 23 0 337 269 17 67 chr2 104650578 104650697 -146037157 + MER5A DNA MER1_type 75 187 -2 186 289 0 0 chr2 104651383 104651428 -146036426 + MIR3 SINE MIR 151 195 -13 255 229 0 0 chr2 104652256 104652317 -146035537 + (TG)n Simple_repeat Simple_repeat 1 61 0 229 275 38 38 chr2 104652862 104652942 -146034912 - MER5B DNA MER1_type -94 84 5 211 205 0 0 chr2 104652972 104653011 -146034843 - MIR SINE MIR -6 256 218 600 293 116 5 chr2 104655474 104655689 -146032165 + MIR SINE MIR 17 255 -7 253 282 13 0 chr2 104655962 104656040 -146031814 + MER94 DNA DNA 3 81 -53 282 349 68 7 chr2 104656072 104656218 -146031636 - MIR SINE MIR -74 188 34 492 229 9 9 chr2 104656232 104656341 -146031513 - MLT1A1 LTR MaLR -256 109 1 2252 93 0 0 chr2 104656821 104657110 -146030744 - AluSg SINE Alu -17 293 5 200 323 20 40 chr2 104657115 104657214 -146030640 - L2 LINE L2 -10 3303 3207 477 216 41 0 chr2 104657284 104657381 -146030473 + MER81 DNA DNA 4 104 -10 1337 200 142 33 chr2 104657434 104657829 -146030025 + MER31B LTR ERV1 1 438 -28 204 308 162 34 chr2 104658479 104658596 -146029258 + MIR SINE MIR 26 157 -105 695 193 0 29 chr2 104659190 104659330 -146028524 - FLAM_C SINE Alu 0 143 8 240 213 49 16 chr2 104659348 104659409 -146028445 - MIR SINE MIR -74 188 126 516 170 10 20 chr2 104659836 104659936 -146027918 - MER58B DNA MER1_type -2 339 241 620 233 0 0 chr2 104660230 104660350 -146027504 + Tigger1 DNA MER2_type 1 120 -2298 245 102 0 20 chr2 104660352 104660401 -146027453 + Tigger1 DNA MER2_type 2209 2256 -162 2495 97 40 0 chr2 104660452 104660803 -146027051 - L1MA2 LINE L1 -4 6300 5936 225 159 0 0 chr2 104660803 104660847 -146027007 + CT-rich Low_complexity Low_complexity 4 47 0 2467 93 0 0 chr2 104660847 104661159 -146026695 - AluSx SINE Alu 0 312 1 4546 124 31 34 chr2 104661160 104661354 -146026500 - L1MA2 LINE L1 -354 5951 5758 2462 71 0 10 chr2 104661354 104661664 -146026190 - AluY SINE Alu -4 307 1 4546 124 31 34 chr2 104661664 104662472 -146025382 - L1MA2 LINE L1 -547 5758 4964 870 122 135 13 chr2 104662497 104662653 -146025201 + Tigger1 DNA MER2_type 2244 2418 0 1161 201 62 36 chr2 104663084 104663267 -146024587 + MLT2D LTR ERVL 129 323 -91 1987 174 18 15 chr2 104663267 104663606 -146024248 + MER61A LTR ERV1 1 340 -3 1161 201 62 36 chr2 104663606 104663696 -146024158 + MLT2D LTR ERVL 323 409 -5 183 186 0 0 chr2 104664010 104664053 -146023801 + GA-rich Low_complexity Low_complexity 2 44 0 1014 208 23 32 chr2 104666255 104666476 -146021378 - MER20 DNA MER1_type 0 219 1 190 177 165 76 chr2 104668257 104668336 -146019518 - MIR3 SINE MIR -1 207 122 249 322 56 0 chr2 104669056 104669146 -146018708 + MIR SINE MIR 20 114 -94 2134 98 44 7 chr2 104669353 104669649 -146018205 - AluSg SINE Alu -3 307 1 1990 124 0 3 chr2 104674284 104674566 -146013288 - AluSx SINE Alu -30 282 2 229 317 83 17 chr2 104675324 104675444 -146012410 - MIR3 SINE MIR -76 132 5 1572 146 63 30 chr2 104675974 104676276 -146011578 + AluSx SINE Alu 1 312 0 2260 106 0 7 chr2 104676401 104676704 -146011150 - AluSg1 SINE Alu -8 301 1 2372 50 0 4 chr2 104677281 104677560 -146010294 + AluY SINE Alu 1 278 -33 288 206 83 21 chr2 104678335 104678439 -146009415 - MIR SINE MIR -67 141 53 476 278 125 9 chr2 104681023 104681239 -146006615 - MIR SINE MIR 0 262 22 339 136 0 0 chr2 104681616 104681675 -146006179 + (TG)n Simple_repeat Simple_repeat 2 60 0 288 77 0 0 chr2 104681777 104681816 -146006038 + (TG)n Simple_repeat Simple_repeat 2 40 0 420 318 0 0 chr2 104682086 104682215 -146005639 + MLT1I LTR MaLR 1 129 -280 1121 155 39 56 chr2 104682271 104682555 -146005299 - MER33 DNA MER1_type -28 296 18 546 255 54 20 chr2 104682581 104682785 -146005069 + MLT1I LTR MaLR 197 407 -2 288 301 47 65 chr2 104682811 104683090 -146004764 - L1ME LINE L1 -302 5819 5546 22 0 0 0 chr2 104683807 104683829 -146004025 + AT_rich Low_complexity Low_complexity 1 22 0 497 236 18 0 chr2 104684090 104684200 -146003654 - MIR SINE MIR -94 168 57 21 36 0 0 chr2 104685162 104685190 -146002664 + AT_rich Low_complexity Low_complexity 1 28 0 218 32 32 0 chr2 104686095 104686126 -146001728 + (TC)n Simple_repeat Simple_repeat 1 32 0 2347 90 0 0 chr2 104686126 104686425 -146001429 - AluSg SINE Alu -11 299 1 203 189 0 0 chr2 104687238 104687275 -146000579 + A-rich Low_complexity Low_complexity 1 37 0 700 139 0 0 chr2 104688086 104688201 -145999653 + FRAM SINE Alu 61 175 -1 363 23 0 0 chr2 104688204 104688248 -145999606 + (CA)n Simple_repeat Simple_repeat 2 45 0 267 152 0 0 chr2 104690205 104690251 -145997603 + T-rich Low_complexity Low_complexity 1 46 0 198 0 0 0 chr2 104690718 104690740 -145997114 + (TC)n Simple_repeat Simple_repeat 2 23 0 225 94 0 0 chr2 104691242 104691274 -145996580 + (TG)n Simple_repeat Simple_repeat 1 32 0 180 0 0 0 chr2 104692259 104692279 -145995575 + (T)n Simple_repeat Simple_repeat 1 20 0 2292 107 3 0 chr2 104693715 104694015 -145993839 + AluSp SINE Alu 1 301 -12 3794 153 36 16 chr2 104695614 104696306 -145991548 - L1MB3 LINE L1 -2 6181 5476 836 105 16 43 chr2 104696306 104696611 -145991243 + (TTTC)n Simple_repeat Simple_repeat 1 296 0 275 136 0 0 chr2 104696612 104696656 -145991198 + (TC)n Simple_repeat Simple_repeat 1 44 0 302 171 14 0 chr2 104696666 104696736 -145991118 + C-rich Low_complexity Low_complexity 2 72 0 231 188 0 0 chr2 104696730 104696778 -145991076 + CT-rich Low_complexity Low_complexity 3 50 0 * 324 0 0 0 chr2 104697957 104697993 -145989861 + (CA)n Simple_repeat Simple_repeat 2 37 0 22 35 0 0 chr2 104699188 104699217 -145988637 + AT_rich Low_complexity Low_complexity 1 29 0 234 91 0 0 chr2 104699891 104699924 -145987930 + (TTA)n Simple_repeat Simple_repeat 3 35 0 512 229 0 18 chr2 104700636 104700745 -145987109 + L2 LINE L2 3202 3308 -5 7975 34 0 0 chr2 104700952 104702109 -145985745 - L1PA4 LINE L1 0 6155 5003 2178 110 3 3 chr2 104704342 104704633 -145983221 + AluSx SINE Alu 1 291 -21 408 20 0 0 chr2 104704633 104704682 -145983172 + (CA)n Simple_repeat Simple_repeat 2 50 0 440 278 17 26 chr2 104705967 104706082 -145981772 - MER91A DNA MER1_type -11 185 72 265 258 16 0 chr2 104706246 104706308 -145981546 - MIR SINE MIR -62 146 84 309 343 68 14 chr2 104706401 104706547 -145981307 + L2 LINE L2 3158 3311 -2 1815 105 76 0 chr2 104710869 104711146 -145976708 + AluSx SINE Alu 1 298 -14 729 221 20 7 chr2 104711801 104711950 -145975904 - MLT1A1 LTR MaLR -11 354 204 2174 191 18 13 chr2 104711953 104712345 -145975509 + MSTD LTR MaLR 1 394 -2 2448 224 15 4 chr2 104712345 104712885 -145974969 + MSTD-int LTR MaLR 2 547 -1188 2125 230 137 0 chr2 104712878 104713373 -145974481 + MSTD-int LTR MaLR 1173 1735 0 * 582 148 0 0 chr2 104713373 104713454 -145974400 + MSTD LTR MaLR 1 81 -315 377 127 0 28 chr2 104713504 104713575 -145974279 + (TCC)n Simple_repeat Simple_repeat 1 69 0 1658 186 10 0 chr2 104713575 104713871 -145973983 - AluJb SINE Alu -13 299 1 229 273 53 53 chr2 104714103 104714253 -145973601 + LTR48 LTR ERV1 629 778 -9 854 209 143 0 chr2 104714762 104714958 -145972896 + MER58A DNA MER1_type 1 224 0 2141 121 10 0 chr2 104717850 104718148 -145969706 - AluSx SINE Alu -11 301 1 2303 71 0 3 chr2 104719225 104719508 -145968346 + AluY SINE Alu 1 282 -29 1677 175 7 16 chr2 104719524 104719833 -145968021 - MLT1A1 LTR MaLR -59 306 1 192 125 0 0 chr2 104720418 104720450 -145967404 + (TTC)n Simple_repeat Simple_repeat 1 32 0 5037 226 61 54 chr2 104721071 104722600 -145965254 + L1MDa LINE L1 17 1556 -4984 1277 168 96 3 chr2 104722601 104722893 -145964961 + L1MDa LINE L1 2298 2616 -3924 293 190 60 60 chr2 104722988 104723088 -145964766 + L1ME3 LINE L1 6017 6116 -46 544 191 97 5 chr2 104723088 104723223 -145964631 + L1MD2 LINE L1 6205 7973 -22 186 103 0 0 chr2 104723271 104723300 -145964554 + (TGGA)n Simple_repeat Simple_repeat 3 31 0 267 257 57 0 chr2 104726608 104726748 -145961106 - L1MDa LINE L1 -2952 3177 3030 331 181 223 0 chr2 104726962 104727056 -145960798 + MER69 DNA AcHobo 21 135 -1091 1910 103 44 11 chr2 104727149 104727471 -145960383 - AluSx SINE Alu 0 331 1 260 0 57 0 chr2 104727749 104727784 -145960070 + (TTTC)n Simple_repeat Simple_repeat 4 40 0 2045 147 3 3 chr2 104727790 104728097 -145959757 - AluSq SINE Alu -6 307 1 365 264 113 28 chr2 104728227 104728696 -145959158 - L1MDa LINE L1 -4701 1428 920 1791 126 54 4 chr2 104729093 104729371 -145958483 + AluSq SINE Alu 1 292 -21 369 43 0 0 chr2 104729371 104729418 -145958436 + (GGAA)n Simple_repeat Simple_repeat 1 47 0 250 170 0 0 chr2 104729418 104729471 -145958383 + AluSp/q SINE Alu 251 303 0 1047 216 28 9 chr2 104729912 104730125 -145957729 - U3 snRNA snRNA 0 217 1 278 276 49 92 chr2 104730201 104730364 -145957490 - MIR SINE MIR -11 251 96 704 265 85 14 chr2 104730466 104730677 -145957177 - MIR SINE MIR 0 262 37 267 280 0 0 chr2 104731537 104731612 -145956242 - tRNA-Ile-ATT tRNA tRNA -2 75 1 6756 95 6 3 chr2 104732251 104733951 -145953903 - L1PA10 LINE L1 -5 6163 4462 330 262 63 52 chr2 104734401 104734592 -145953262 - MIR SINE MIR -49 213 21 713 295 0 0 chr2 104734596 104734769 -145953085 + MER58A DNA MER1_type 1 173 -51 849 223 0 6 chr2 104734773 104734930 -145952924 - MER45A DNA AcHobo -22 156 1 263 344 64 16 chr2 104735789 104735914 -145951940 - MIR3 SINE MIR -63 145 15 1085 211 16 0 chr2 104736596 104736781 -145951073 + MER5A DNA MER1_type 1 188 -1 240 333 0 0 chr2 104736818 104736890 -145950964 + MLT1I LTR MaLR 70 141 -268 361 244 67 17 chr2 104737385 104737504 -145950350 - LTR33A LTR ERVL -34 489 365 301 304 18 35 chr2 104737601 104737716 -145950138 + LTR16C LTR ERVL 334 479 -12 324 0 0 0 chr2 104737950 104737986 -145949868 + (TG)n Simple_repeat Simple_repeat 1 36 0 274 320 23 17 chr2 104738391 104738540 -145949314 - MIR SINE MIR -65 143 34 302 247 69 104 chr2 104738601 104738734 -145949120 + MIR SINE MIR 4 129 -133 885 227 6 6 chr2 104738734 104738897 -145948957 + FRAM SINE Alu 1 163 -3 302 247 69 104 chr2 104738897 104738986 -145948868 + MIR SINE MIR 129 220 -42 3100 158 8 0 chr2 104739298 104739786 -145948068 - L1MB3 LINE L1 -7 6176 5685 675 298 38 23 chr2 104740403 104740718 -145947136 + MLT1G LTR MaLR 15 290 -300 379 221 19 123 chr2 104740784 104740938 -145946916 + MLT1G LTR MaLR 425 562 -5 217 333 59 85 chr2 104740938 104741091 -145946763 - L2 LINE L2 -26 3246 3098 1022 87 23 12 chr2 104743198 104743371 -145944483 + (TTTC)n Simple_repeat Simple_repeat 1 175 0 240 35 0 0 chr2 104743373 104743402 -145944452 + (TCCC)n Simple_repeat Simple_repeat 4 32 0 842 146 0 32 chr2 104743422 104743607 -145944247 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 568 197 24 31 chr2 104743755 104743882 -145943972 + FLAM_C SINE Alu 1 126 -7 923 229 16 5 chr2 104744002 104744194 -145943660 - L1PB4 LINE L1 -2 6154 5961 24 0 0 0 chr2 104744727 104744751 -145943103 + AT_rich Low_complexity Low_complexity 1 24 0 449 241 105 8 chr2 104747817 104747950 -145939904 - MER103 DNA DNA -11 155 10 265 215 15 15 chr2 104749113 104749178 -145938676 + GA-rich Low_complexity Low_complexity 1 65 0 353 349 196 18 chr2 104749833 104750174 -145937680 + L2 LINE L2 2870 3271 -1 213 348 0 0 chr2 104750549 104750618 -145937236 + CT-rich Low_complexity Low_complexity 4 72 0 252 282 68 29 chr2 104751363 104751466 -145936388 - L2 LINE L2 -8 3305 3199 2254 100 3 0 chr2 104751626 104751915 -145935939 + AluY SINE Alu 13 302 -9 349 234 13 13 chr2 104751992 104752069 -145935785 - L2 LINE L2 -5 3308 3232 197 33 33 0 chr2 104752096 104752126 -145935728 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1731 79 39 0 chr2 104752126 104752355 -145935499 - L1PA4 LINE L1 -10 6145 5908 2706 152 7 27 chr2 104752380 104752821 -145935033 + Tigger2a DNA MER2_type 2 433 -1 339 237 0 0 chr2 104752828 104752921 -145934933 + (TA)n Simple_repeat Simple_repeat 2 94 0 386 316 108 33 chr2 104752971 104753400 -145934454 - L2 LINE L2 -165 3148 2669 208 326 96 7 chr2 104753601 104753736 -145934118 + L3 LINE CR1 1428 1574 -3 849 293 87 6 chr2 104753863 104754218 -145933636 + LTR16A LTR ERVL 56 439 -11 2357 100 0 0 chr2 104754244 104754555 -145933299 + AluY SINE Alu 1 311 0 182 296 19 0 chr2 104754730 104754784 -145933070 + L2 LINE L2 3209 3263 -9 807 245 74 28 chr2 104755551 104755767 -145932087 + MIR SINE MIR 13 238 -24 196 216 108 135 chr2 104755962 104756073 -145931781 + MIR SINE MIR 66 173 -89 2350 103 7 0 chr2 104756133 104756443 -145931411 + AluSx SINE Alu 1 312 0 192 40 0 0 chr2 104762717 104762742 -145925112 + (T)n Simple_repeat Simple_repeat 1 25 0 193 273 68 57 chr2 104764191 104764279 -145923575 - MIR SINE MIR -130 132 44 805 216 77 0 chr2 104767312 104767506 -145920348 - MER3 DNA MER1_type 0 209 1 2892 122 25 31 chr2 104768209 104768719 -145919135 - L1MA6 LINE L1 0 6300 5794 624 297 151 0 chr2 104768766 104768985 -145918869 - MIR SINE MIR -1 261 10 1667 201 7 0 chr2 104769628 104769937 -145917917 + AluJb SINE Alu 1 311 -1 385 34 34 0 chr2 104770277 104770336 -145917518 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 344 268 18 6 chr2 104770336 104770500 -145917354 + (TA)n Simple_repeat Simple_repeat 2 167 0 293 309 13 34 chr2 104770506 104770655 -145917199 + L1MEd LINE L1 1090 1235 -4884 300 300 165 39 chr2 104771291 104771377 -145916477 + L1MEd LINE L1 2096 2170 -3959 2122 118 0 3 chr2 104771377 104771673 -145916181 - AluSx SINE Alu -17 295 1 300 300 165 39 chr2 104771673 104771846 -145916008 + L1MEd LINE L1 2170 2388 -3741 22 56 0 0 chr2 104773465 104773501 -145914353 + AT_rich Low_complexity Low_complexity 1 36 0 561 255 55 7 chr2 104774563 104774708 -145913146 - L2 LINE L2 -4 3309 3158 4291 180 30 22 chr2 104774711 104775847 -145912007 - L1MB8 LINE L1 -80 6098 4961 1912 293 109 20 chr2 104775977 104777081 -145910773 - L2 LINE L2 -75 3238 2036 613 336 79 45 chr2 104777162 104777738 -145910116 - L2 LINE L2 -10 3303 2711 1122 158 0 30 chr2 104777787 104777989 -145909865 - AluJo SINE Alu -30 282 87 348 312 89 0 chr2 104777995 104778152 -145909702 - L2 LINE L2 -778 2536 2366 1511 173 76 83 chr2 104778815 104778871 -145908983 - MSTB2 LTR MaLR 0 457 402 2246 78 0 3 chr2 104778871 104779177 -145908677 - AluY SINE Alu 0 305 1 1511 173 76 83 chr2 104779177 104779577 -145908277 - MSTB2 LTR MaLR -55 402 3 292 367 53 6 chr2 104781835 104782004 -145905850 + MIR SINE MIR 46 222 -40 206 281 16 0 chr2 104782604 104782668 -145905186 - MIR SINE MIR 0 262 198 1916 183 14 3 chr2 104782727 104783088 -145904766 - MLT1A1 LTR MaLR 0 365 1 718 161 0 0 chr2 104784295 104784432 -145903422 - AluSp/q SINE Alu 0 313 193 4611 145 48 36 chr2 104784561 104785612 -145902242 + L1PA16 LINE L1 5106 6166 0 3542 165 42 7 chr2 104785613 104786557 -145901297 + L1MA8 LINE L1 4905 5892 -399 251 109 0 0 chr2 104786554 104786600 -145901254 + L1MA7 LINE L1 6240 6285 -6 * 346 332 103 22 chr2 104786965 104787188 -145900666 + MIR SINE MIR 19 259 -3 1628 201 39 25 chr2 104788299 104788657 -145899197 + MLT1A1 LTR MaLR 3 365 0 21 0 0 0 chr2 104789317 104789338 -145898516 + AT_rich Low_complexity Low_complexity 1 21 0 2363 160 34 0 chr2 104789623 104790041 -145897813 - Tigger1 DNA MER2_type 0 2418 1987 2040 247 19 22 chr2 104790041 104790451 -145897403 - L1MC3 LINE L1 -1054 6731 6322 1752 189 29 61 chr2 104790451 104790907 -145896947 + LTR47B LTR ERVL 1 441 -2 2040 247 19 22 chr2 104790907 104791079 -145896775 - L1MC3 LINE L1 -1463 6322 6151 * 3448 73 2 7 chr2 104791074 104791648 -145896206 - L1PA7 LINE L1 -662 5492 4921 5304 55 3 0 chr2 104791648 104792314 -145895540 + L1PA7 LINE L1 5481 6151 -3 3126 234 99 19 chr2 104792329 104793845 -145894009 - L1MC3 LINE L1 -743 5403 4516 748 82 0 0 chr2 104793847 104793944 -145893910 - AluY SINE Alu -214 97 1 22 35 0 0 chr2 104794004 104794033 -145893821 + AT_rich Low_complexity Low_complexity 1 29 0 723 255 113 20 chr2 104795012 104795216 -145892638 + MER58A DNA MER1_type 1 223 -1 279 265 44 73 chr2 104797025 104797161 -145890693 + L2 LINE L2 3182 3313 0 182 298 191 24 chr2 104798025 104798109 -145889745 + MIR SINE MIR 18 115 -93 709 208 15 0 chr2 104798944 104799074 -145888780 + FLAM_C SINE Alu 1 132 -11 1287 186 70 34 chr2 104799426 104799608 -145888246 - MER44D DNA MER2_type -1882 609 435 2147 175 25 25 chr2 104799608 104800042 -145887812 - Tigger2a DNA MER2_type 0 434 1 1287 186 70 34 chr2 104800042 104800072 -145887782 - MER44D DNA MER2_type -2056 435 408 252 0 0 0 chr2 104800072 104800100 -145887754 + (TC)n Simple_repeat Simple_repeat 1 28 0 1287 186 70 34 chr2 104800100 104800213 -145887641 - MER44D DNA MER2_type -2083 408 1 216 289 184 0 chr2 104800264 104800340 -145887514 + MIR SINE MIR 34 123 -85 1665 256 88 42 chr2 104800510 104801099 -145886755 - MLT1E3 LTR MaLR -8 616 1 21 0 0 0 chr2 104802447 104802468 -145885386 + AT_rich Low_complexity Low_complexity 1 21 0 280 382 8 8 chr2 104802617 104802740 -145885114 + MIR SINE MIR 32 154 -108 31 44 0 0 chr2 104802740 104802785 -145885069 + AT_rich Low_complexity Low_complexity 1 45 0 1931 174 3 0 chr2 104803275 104803586 -145884268 + AluSx SINE Alu 1 312 0 1582 229 36 9 chr2 104803678 104804064 -145883790 + MLT2B2 LTR ERVL 1 414 0 27 49 0 0 chr2 104804381 104804422 -145883432 + AT_rich Low_complexity Low_complexity 1 41 0 1451 217 0 7 chr2 104804862 104805134 -145882720 + AluJo SINE Alu 7 276 -36 1104 84 17 11 chr2 104805142 104805321 -145882533 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1396 250 73 25 chr2 104805392 104805850 -145882004 + MLT1D LTR MaLR 1 467 0 433 216 49 74 chr2 104806018 104806180 -145881674 - MIR SINE MIR -2 260 103 3206 16 8 5 chr2 104806603 104806981 -145880873 - L1PA3 LINE L1 -4 6151 5773 13287 144 25 38 chr2 104806999 104809270 -145878584 + Tigger1 DNA MER2_type 1 2299 -119 1814 137 14 7 chr2 104809270 104809554 -145878300 + AluSx SINE Alu 1 286 -26 954 63 0 0 chr2 104809554 104809680 -145878174 + (GGAA)n Simple_repeat Simple_repeat 3 128 0 13287 144 25 38 chr2 104809680 104809853 -145878001 + Tigger1 DNA MER2_type 2297 2415 -3 2434 84 0 0 chr2 104809926 104810234 -145877620 - AluY SINE Alu -3 308 1 23 54 0 0 chr2 104810588 104810625 -145877229 + AT_rich Low_complexity Low_complexity 1 37 0 27 29 0 0 chr2 104811388 104811422 -145876432 + AT_rich Low_complexity Low_complexity 1 34 0 306 302 16 0 chr2 104812204 104812333 -145875521 - MER104 DNA Tc2 -46 134 4 1059 238 139 0 chr2 104813062 104813118 -145874736 - LTR52 LTR ERVL -18 403 356 186 43 0 0 chr2 104813118 104813141 -145874713 + (CA)n Simple_repeat Simple_repeat 1 23 0 1059 238 139 0 chr2 104813141 104813408 -145874446 - LTR52 LTR ERVL -65 356 35 180 77 0 0 chr2 104813408 104813434 -145874420 + (CAA)n Simple_repeat Simple_repeat 2 27 0 508 285 75 81 chr2 104813459 104813831 -145874023 + MLT1J LTR MaLR 142 511 0 1354 227 7 97 chr2 104815561 104815883 -145871971 - MLT1D LTR MaLR -2 503 232 1359 181 67 11 chr2 104815883 104816153 -145871701 - AluJo SINE Alu -27 285 1 1354 227 7 97 chr2 104816153 104816284 -145871570 - MLT1D LTR MaLR -273 232 91 303 224 60 0 chr2 104816465 104816532 -145871322 - MLT1D LTR MaLR -434 71 1 27 0 0 0 chr2 104816961 104816988 -145870866 + AT_rich Low_complexity Low_complexity 1 27 0 2261 108 0 7 chr2 104817394 104817700 -145870154 - AluSg SINE Alu -6 304 1 2420 57 3 0 chr2 104818071 104818370 -145869484 + AluY SINE Alu 1 300 -11 276 170 0 0 chr2 104818735 104818782 -145869072 + MLT1J LTR MaLR 412 458 -53 31 58 0 0 chr2 104818886 104818938 -145868916 + AT_rich Low_complexity Low_complexity 1 52 0 1725 174 51 11 chr2 104820092 104820465 -145867389 - L1MA4 LINE L1 -6 6294 5907 2566 139 21 9 chr2 104820465 104820994 -145866860 + L1M1 LINE L1 5177 5704 -596 22 0 0 0 chr2 104821289 104821311 -145866543 + AT_rich Low_complexity Low_complexity 1 22 0 686 208 91 0 chr2 104821379 104821533 -145866321 + FAM SINE Alu 1 168 -7 1128 132 4 62 chr2 104821829 104822072 -145865782 - L1MA8 LINE L1 -10 6281 6053 259 175 206 0 chr2 104822859 104822922 -145864932 + L2 LINE L2 3238 3313 0 249 270 14 40 chr2 104822934 104823008 -145864846 + MIR SINE MIR 23 94 -168 617 211 113 5 chr2 104824714 104824899 -145862955 + L1M4 LINE L1 4472 4676 -1470 180 0 0 0 chr2 104824904 104824924 -145862930 + (ATG)n Simple_repeat Simple_repeat 2 21 0 2065 137 3 0 chr2 104825222 104825514 -145862340 + AluSx SINE Alu 5 297 -15 198 103 0 0 chr2 104825518 104825547 -145862307 + (TA)n Simple_repeat Simple_repeat 1 29 0 225 256 25 50 chr2 104826947 104827068 -145860786 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 * 439 295 23 0 chr2 104827027 104827253 -145860601 + (TA)n Simple_repeat Simple_repeat 1 231 0 234 190 35 17 chr2 104827258 104827316 -145860538 - L1MCa LINE L1 -4362 2064 2006 233 266 0 43 chr2 104827362 104827456 -145860398 + L1MC4 LINE L1 6614 6703 -1339 369 289 16 0 chr2 104827459 104827580 -145860274 + (TA)n Simple_repeat Simple_repeat 1 123 0 21 36 0 0 chr2 104830019 104830047 -145857807 + AT_rich Low_complexity Low_complexity 1 28 0 2464 148 16 12 chr2 104830242 104830668 -145857186 - MSTA LTR MaLR 0 428 1 2120 108 40 0 chr2 104831075 104831372 -145856482 - AluSg SINE Alu -1 309 1 788 178 0 0 chr2 104831377 104831506 -145856348 - FLAM_C SINE Alu -4 129 1 327 226 88 29 chr2 104831721 104831823 -145856031 + HAL1 LINE L1 1592 1699 -808 229 290 0 0 chr2 104831868 104831930 -145855924 + HAL1 LINE L1 1801 1862 -645 1327 137 3 78 chr2 104832033 104832422 -145855432 + L1MA4 LINE L1 6016 6381 0 243 248 30 20 chr2 104832451 104832552 -145855302 + HAL1 LINE L1 2078 2179 -328 849 242 152 23 chr2 104832794 104833190 -145854664 - LTR16A1 LTR ERVL -7 450 4 259 348 210 23 chr2 104833511 104833859 -145853995 + L3 LINE CR1 1149 1561 -16 1854 121 7 11 chr2 104834014 104834295 -145853559 + AluSg SINE Alu 9 288 -22 218 299 84 9 chr2 104834353 104834460 -145853394 - L2 LINE L2 -6 3307 3193 21 0 0 0 chr2 104834562 104834583 -145853271 + AT_rich Low_complexity Low_complexity 1 21 0 2783 158 21 10 chr2 104836282 104836764 -145851090 - LTR45B LTR ERV1 0 489 3 499 309 52 5 chr2 104837212 104837406 -145850448 + MIR SINE MIR 49 251 -11 260 340 40 0 chr2 104837999 104838099 -145849755 + MER5A DNA MER1_type 9 112 -77 2031 136 131 11 chr2 104838498 104838880 -145848974 + MSTA LTR MaLR 1 428 0 513 221 46 0 chr2 104839507 104839638 -145848216 + MER45 DNA AcHobo 1422 1558 -23 232 288 38 76 chr2 104839982 104840114 -145847740 - MER94 DNA DNA -4 130 4 785 154 7 22 chr2 104841012 104841148 -145846706 - AluJo SINE Alu -178 134 1 718 215 92 129 chr2 104841386 104842011 -145845843 - Charlie2 DNA MER1_type -146 2716 2131 1562 204 4 0 chr2 104842011 104842329 -145845525 - AluJb SINE Alu 0 319 1 718 215 92 129 chr2 104842329 104842590 -145845264 - Charlie2 DNA MER1_type -731 2131 1862 381 259 26 17 chr2 104842680 104842796 -145845058 - Charlie2 DNA MER1_type -2590 192 76 206 193 0 60 chr2 104842931 104843014 -145844840 + (TAAA)n Simple_repeat Simple_repeat 1 78 0 345 322 8 0 chr2 104843407 104843525 -145844329 + MER63 DNA MER1_type 670 788 -273 207 100 0 0 chr2 104844054 104844084 -145843770 + (A)n Simple_repeat Simple_repeat 1 30 0 1139 246 48 0 chr2 104844547 104844795 -145843059 - MLT1E LTR MaLR 0 593 334 1797 128 34 24 chr2 104844921 104845217 -145842637 + AluSp SINE Alu 1 299 -14 257 304 43 16 chr2 104845323 104845507 -145842347 + L1MEc LINE L1 1251 1439 -4957 11661 28 20 0 chr2 104845819 104847954 -145839900 + L1PA4 LINE L1 4000 6153 -2 2160 82 14 0 chr2 104848068 104848391 -145839463 - AluSp SINE Alu 0 327 1 363 291 66 18 chr2 104848610 104848973 -145838881 + L1MEc LINE L1 2122 2472 -3743 1062 291 57 44 chr2 104849132 104849794 -145838060 + L1MEc LINE L1 3634 4304 -1911 21 0 0 0 chr2 104849936 104849957 -145837897 + AT_rich Low_complexity Low_complexity 1 21 0 1735 260 38 103 chr2 104849983 104851376 -145836478 + L1MD3 LINE L1 -135 1184 -4852 454 126 48 0 chr2 104851385 104851488 -145836366 + (TA)n Simple_repeat Simple_repeat 1 108 0 364 235 78 40 chr2 104851539 104851669 -145836185 + L1MD3 LINE L1 1290 1571 -4855 1748 182 3 10 chr2 104851840 104852137 -145835717 - AluJo SINE Alu -17 295 1 748 258 61 9 chr2 104852142 104852441 -145835413 + L1MD3 LINE L1 1682 1910 -4516 23 33 0 0 chr2 104852444 104852474 -145835380 + AT_rich Low_complexity Low_complexity 1 30 0 1552 116 98 14 chr2 104852478 104852755 -145835099 - L1PA10 LINE L1 -4 6164 5865 15099 193 36 32 chr2 104852758 104853562 -145834292 - L1P3 LINE L1 -2145 4316 3517 2306 78 7 7 chr2 104853562 104853857 -145833997 + AluY SINE Alu 1 295 -16 15099 193 36 32 chr2 104853857 104854823 -145833031 - L1P3 LINE L1 -2944 3517 2557 2783 9 0 31 chr2 104854823 104855149 -145832705 - AluYb8 SINE Alu -2 316 1 15099 193 36 32 chr2 104855149 104857619 -145830235 - L1P3 LINE L1 -3904 2557 10 2383 230 90 23 chr2 104857630 104859015 -145828839 + L1MD3 LINE L1 1934 3415 -3011 358 217 66 44 chr2 104859011 104859191 -145828663 + L1M4 LINE L1 4951 5131 -1015 * 300 252 39 10 chr2 104859209 104859312 -145828542 - L1M4 LINE L1 -1426 4720 4615 * 1942 252 83 15 chr2 104859307 104860204 -145827650 + L1MD3 LINE L1 4787 5745 -701 1079 215 130 79 chr2 104860250 104860580 -145827274 - MLT1B LTR MaLR -3 387 41 3051 184 35 5 chr2 104860596 104861248 -145826606 - L1PB4 LINE L1 -3 6153 5482 521 167 31 0 chr2 104861432 104861528 -145826326 - L1P5 LINE L1 -576 5580 5482 2762 238 160 63 chr2 104861558 104862331 -145825523 + L1MD3 LINE L1 5787 6484 -1791 321 93 0 0 chr2 104862331 104862385 -145825469 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 2762 238 160 63 chr2 104862385 104863224 -145824630 + L1MD3 LINE L1 6484 7555 -720 412 270 8 16 chr2 104863227 104863353 -145824501 + MLT1F1 LTR MaLR 1 125 -442 608 241 8 0 chr2 104863353 104863486 -145824368 + L1MD3 LINE L1 7684 7817 -458 337 310 14 0 chr2 104863661 104863803 -145824051 - L1ME3A LINE L1 0 6170 6027 462 131 0 0 chr2 104863803 104863902 -145823952 + (TA)n Simple_repeat Simple_repeat 1 99 0 334 303 21 14 chr2 104863927 104864072 -145823782 - L1ME3A LINE L1 -174 5988 5843 641 309 119 67 chr2 104864168 104864685 -145823169 + L1MC5 LINE L1 4325 4814 -1332 1632 188 3 0 chr2 104864685 104864977 -145822877 + AluJb SINE Alu 13 305 -7 641 309 119 67 chr2 104864977 104865257 -145822597 + L1MC5 LINE L1 4814 5173 -973 1114 203 161 23 chr2 104865257 104865518 -145822336 - AluJo SINE Alu -5 297 1 641 309 119 67 chr2 104865518 104865595 -145822259 + L1MC5 LINE L1 5173 5245 -901 943 269 98 25 chr2 104865710 104866157 -145821697 + L1MC5 LINE L1 5355 5834 -1974 26 64 0 0 chr2 104866158 104866205 -145821649 + AT_rich Low_complexity Low_complexity 1 47 0 35 24 0 0 chr2 104866448 104866490 -145821364 + AT_rich Low_complexity Low_complexity 1 42 0 2125 98 0 14 chr2 104866491 104866838 -145821016 - AluSg SINE Alu 0 343 1 25 31 0 0 chr2 104866939 104866971 -145820883 + AT_rich Low_complexity Low_complexity 1 32 0 1343 237 95 106 chr2 104867324 104868271 -145819583 + L1MC5 LINE L1 6546 7482 -479 8541 145 15 20 chr2 104868271 104870589 -145817265 - L1PA10 LINE L1 -5 6163 3846 1343 237 95 106 chr2 104870589 104871021 -145816833 + L1MC5 LINE L1 7482 7917 -44 9628 183 29 24 chr2 104871107 104874329 -145813525 - L1MA4A LINE L1 -24 6981 3740 16552 232 34 20 chr2 104874331 104880815 -145807039 + L1PA13 LINE L1 1 7097 -502 1894 194 42 34 chr2 104880815 104881355 -145806499 + MLT2A2 LTR ERVL 1 546 -8 3296 123 4 4 chr2 104881358 104881864 -145805990 + L1PA13 LINE L1 7092 7597 -4 3048 236 13 18 chr2 104881889 104882892 -145804962 - L1MA4A LINE L1 -3103 3745 2750 2230 134 100 13 chr2 104882896 104883285 -145804569 + MSTA LTR MaLR 6 428 0 2320 191 47 19 chr2 104883285 104883814 -145804040 - L1MA4A LINE L1 -4115 2734 2191 8654 210 30 13 chr2 104883826 104885567 -145802287 - L1PA15 LINE L1 -2 6814 4990 207 100 0 0 chr2 104885567 104885597 -145802257 + (TG)n Simple_repeat Simple_repeat 2 31 0 8654 210 30 13 chr2 104885597 104886922 -145800932 - L1PA15 LINE L1 -1826 4990 3690 5978 107 8 15 chr2 104886928 104888290 -145799564 - L1PA10 LINE L1 -3 6165 4800 7298 146 15 4 chr2 104888293 104888421 -145799433 + L1P LINE L1 3561 3686 -2460 822 40 16 24 chr2 104888421 104888545 -145799309 + (GAAA)n Simple_repeat Simple_repeat 2 124 0 7298 146 15 4 chr2 104888545 104889646 -145798208 + L1P LINE L1 3686 4804 -1342 4250 265 45 11 chr2 104889644 104891949 -145795905 - L1PA15 LINE L1 -3103 3694 1293 * 3212 259 7 27 chr2 104892049 104892816 -145795038 - L1PA15 LINE L1 -6036 751 1 10281 216 16 17 chr2 104892821 104894900 -145792954 - L1M2 LINE L1 -4652 2197 121 249 329 14 0 chr2 104895276 104895349 -145792505 + L2 LINE L2 2959 3032 -240 306 317 87 25 chr2 104895554 104895715 -145792139 + MIR SINE MIR 74 244 -18 729 249 33 0 chr2 104899519 104899700 -145788154 + MER105 DNA DNA 14 200 -4 372 231 165 80 chr2 104899870 104900082 -145787772 + LTR33 LTR ERVL 3 232 -289 213 65 0 0 chr2 104901316 104901347 -145786507 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 383 372 39 26 chr2 104902799 104903033 -145784821 - MIR SINE MIR 0 262 26 228 338 26 0 chr2 104903100 104903177 -145784677 - MIR SINE MIR -64 144 66 290 304 11 0 chr2 104904492 104904584 -145783270 - LTR33 LTR ERVL -58 463 371 2070 233 77 104 chr2 104904595 104905261 -145782593 + MER21B LTR ERV1 12 653 -210 2639 23 0 3 chr2 104905261 104905569 -145782285 - L1PA3 LINE L1 -3 6152 5846 2070 233 77 104 chr2 104905569 104905722 -145782132 + MER21B LTR ERV1 653 809 -54 233 105 53 0 chr2 104906148 104906186 -145781668 + Tigger5 DNA MER2_type 307 346 -1977 24 53 0 0 chr2 104907408 104907446 -145780408 + AT_rich Low_complexity Low_complexity 1 38 0 27 0 0 0 chr2 104908615 104908642 -145779212 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 104909483 104909506 -145778348 + AT_rich Low_complexity Low_complexity 1 23 0 597 300 54 35 chr2 104909641 104909901 -145777953 - L2 LINE L2 -43 3270 3006 235 284 71 64 chr2 104909946 104910087 -145777767 - L2 LINE L2 -514 2800 2659 471 233 128 23 chr2 104910095 104910314 -145777540 + MER33 DNA MER1_type 2 243 -81 390 135 83 0 chr2 104910548 104910644 -145777210 + MER33 DNA MER1_type 191 294 -30 1282 266 24 6 chr2 104910648 104911456 -145776398 + L1MDb LINE L1 11 1004 -5405 1072 215 6 3 chr2 104911453 104911769 -145776085 - L1M4b LINE L1 -6012 847 356 * 564 217 9 0 chr2 104911834 104911949 -145775905 + L1MDb LINE L1 1006 1121 -5288 1234 207 18 42 chr2 104911962 104912247 -145775607 + L1MD2 LINE L1 6009 6286 -73 2043 105 48 0 chr2 104913034 104913329 -145774525 + AluSc SINE Alu 1 309 0 3854 239 47 36 chr2 104913362 104915386 -145772468 + L1M4b LINE L1 5 2258 -4701 195 42 0 0 chr2 104915386 104915410 -145772444 + (TAA)n Simple_repeat Simple_repeat 1 24 0 3854 239 47 36 chr2 104915410 104915547 -145772307 + L1M4b LINE L1 2258 2392 -4567 477 265 62 1 chr2 104916035 104916336 -145771518 + L1M4b LINE L1 2784 3102 -3855 702 245 93 45 chr2 104916341 104916621 -145771233 - MLT1D LTR MaLR 0 505 207 2018 145 0 0 chr2 104916621 104916903 -145770951 + AluSx SINE Alu 1 282 -30 702 245 93 45 chr2 104916903 104916932 -145770922 - MLT1D LTR MaLR -298 207 181 22 0 0 0 chr2 104916953 104916975 -145770879 + AT_rich Low_complexity Low_complexity 1 22 0 675 272 16 11 chr2 104916975 104917166 -145770688 - MLT1D LTR MaLR -311 194 3 861 264 45 120 chr2 104917182 104917674 -145770180 - MLT1D-int LTR MaLR -24 1347 893 180 0 0 0 chr2 104917697 104917717 -145770137 + (TTTC)n Simple_repeat Simple_repeat 4 23 0 3008 236 26 55 chr2 104917804 104918713 -145769141 - MLT1D-int LTR MaLR -487 884 2 1034 266 96 37 chr2 104918714 104919150 -145768704 - MLT1D LTR MaLR 0 505 44 3546 230 55 69 chr2 104919196 104920755 -145767099 + L1M4b LINE L1 3122 4658 -2299 335 298 79 9 chr2 104920814 104920928 -145766926 + L2 LINE L2 3191 3312 -1 21 0 0 0 chr2 104921401 104921422 -145766432 + AT_rich Low_complexity Low_complexity 1 21 0 1418 154 0 18 chr2 104922208 104922435 -145765419 + AluSg/x SINE Alu 65 287 -23 23 68 0 0 chr2 104922480 104922524 -145765330 + AT_rich Low_complexity Low_complexity 1 44 0 950 202 0 0 chr2 104922573 104922741 -145765113 + FRAM SINE Alu 1 167 -9 327 270 79 11 chr2 104923912 104924001 -145763853 - MIR SINE MIR -155 107 13 518 277 40 23 chr2 104924347 104924524 -145763330 + MIR SINE MIR 59 238 -24 2531 41 0 0 chr2 104925038 104925333 -145762521 + AluY SINE Alu 1 295 -16 305 181 108 24 chr2 104925336 104925419 -145762435 - L1MC4 LINE L1 -1339 6703 6614 399 120 77 0 chr2 104925426 104925543 -145762311 + (TA)n Simple_repeat Simple_repeat 1 126 0 203 272 25 37 chr2 104926457 104926538 -145761316 + L2 LINE L2 3234 3313 0 53 17 0 0 chr2 104927183 104927243 -145760611 + AT_rich Low_complexity Low_complexity 1 60 0 189 0 0 0 chr2 104927651 104927672 -145760182 + (TA)n Simple_repeat Simple_repeat 2 22 0 332 314 83 6 chr2 104928218 104928374 -145759480 + MIR SINE MIR 79 246 -16 2387 66 0 7 chr2 104929318 104929620 -145758234 + AluY SINE Alu 1 300 -11 387 322 35 50 chr2 104930298 104930451 -145757403 - LTR16C LTR ERVL -2 489 338 4030 107 12 0 chr2 104930451 104931041 -145756813 + L1PA14 LINE L1 5564 6160 -1 387 322 35 50 chr2 104931041 104931089 -145756765 - LTR16C LTR ERVL -153 338 291 189 0 0 0 chr2 104933333 104933354 -145754500 + (TG)n Simple_repeat Simple_repeat 2 22 0 1947 94 97 62 chr2 104933626 104933978 -145753876 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr2 104934632 104934660 -145753194 + AT_rich Low_complexity Low_complexity 1 28 0 1593 217 50 9 chr2 104934698 104935039 -145752815 + MLT1A1 LTR MaLR 11 365 0 3379 247 82 68 chr2 104935043 104936383 -145751471 + MLT1A1-int LTR MaLR 5 1363 -8 1806 191 11 27 chr2 104936390 104936761 -145751093 + MLT1A1 LTR MaLR 1 365 0 2018 235 67 30 chr2 104936797 104937453 -145750401 + L1MD3 LINE L1 7314 7993 -2 258 316 104 10 chr2 104937796 104937989 -145749865 + HAL1 LINE L1 1530 1740 -767 677 137 72 7 chr2 104938136 104938289 -145749565 + L1MA8 LINE L1 6125 6287 -4 226 271 174 27 chr2 104939032 104939171 -145748683 - MIR SINE MIR -65 143 1 22 21 0 62 chr2 104939811 104939859 -145747995 + AT_rich Low_complexity Low_complexity 1 45 0 232 359 166 11 chr2 104940017 104940198 -145747656 - L2 LINE L2 -25 3247 3039 285 29 0 0 chr2 104940565 104940599 -145747255 + (TG)n Simple_repeat Simple_repeat 2 35 0 403 296 206 39 chr2 104941009 104941344 -145746510 - L2 LINE L2 -106 3207 2817 332 307 70 0 chr2 104941546 104941667 -145746187 + MIR SINE MIR 56 183 -63 293 271 19 97 chr2 104941755 104942013 -145745841 - L2 LINE L2 -1504 1810 1573 595 268 43 6 chr2 104942430 104942594 -145745260 + MER5A DNA MER1_type 2 171 -18 22 35 0 0 chr2 104944168 104944197 -145743657 + AT_rich Low_complexity Low_complexity 1 29 0 378 74 0 0 chr2 104944846 104944900 -145742954 + (TG)n Simple_repeat Simple_repeat 1 54 0 503 336 147 26 chr2 104945881 104946297 -145741557 + L3 LINE CR1 400 865 -712 23 0 0 0 chr2 104948056 104948079 -145739775 + AT_rich Low_complexity Low_complexity 1 23 0 1550 200 0 55 chr2 104948129 104948454 -145739400 + AluJo SINE Alu 1 307 -5 1906 181 23 65 chr2 104948871 104949303 -145738551 - MLT2D LTR ERVL 0 414 1 808 273 157 30 chr2 104949303 104949710 -145738144 - MLT1H LTR MaLR -3 546 88 1919 106 133 26 chr2 104950046 104950385 -145737469 + THE1C LTR MaLR 1 375 0 2108 146 118 5 chr2 104950636 104951019 -145736835 + MSTA LTR MaLR 3 428 0 25 0 0 0 chr2 104951817 104951842 -145736012 + AT_rich Low_complexity Low_complexity 1 25 0 279 248 175 7 chr2 104952810 104952947 -145734907 - MER103 DNA DNA -2 164 5 843 130 19 71 chr2 104952948 104953102 -145734752 + FRAM SINE Alu 1 146 -30 304 258 47 23 chr2 104953463 104953591 -145734263 - Charlie8 DNA MER1_type -2213 204 74 218 143 20 0 chr2 104954360 104954409 -145733445 + (CA)n Simple_repeat Simple_repeat 1 50 0 23 0 0 0 chr2 104954748 104954771 -145733083 + AT_rich Low_complexity Low_complexity 1 23 0 203 0 37 0 chr2 104955063 104955090 -145732764 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 23 68 0 0 chr2 104958332 104958376 -145729478 + AT_rich Low_complexity Low_complexity 1 44 0 204 132 26 0 chr2 104960228 104960266 -145727588 + (CA)n Simple_repeat Simple_repeat 2 40 0 284 120 20 0 chr2 104960269 104960319 -145727535 + GA-rich Low_complexity Low_complexity 2 52 0 747 254 28 28 chr2 104960545 104960758 -145727096 - MIR SINE MIR -48 214 2 257 333 0 12 chr2 104960777 104960861 -145726993 + L3 LINE CR1 1155 1237 -340 633 320 95 25 chr2 104962281 104962756 -145725098 + HAL1 LINE L1 339 846 -1661 2394 63 33 0 chr2 104962774 104963075 -145724779 + AluY SINE Alu 1 311 0 26 64 0 0 chr2 104964751 104964798 -145723056 + AT_rich Low_complexity Low_complexity 1 47 0 5443 118 25 2 chr2 104965153 104965992 -145721862 + L1MA3 LINE L1 5448 6305 0 2700 217 13 7 chr2 104965998 104966547 -145721307 - MER74A LTR ERVL -6 552 1 317 306 155 26 chr2 104966722 104966915 -145720939 + MIR SINE MIR 31 248 -14 2593 112 2 20 chr2 104967160 104967310 -145720544 + L1PA10 LINE L1 5396 5547 -621 2254 137 31 14 chr2 104967310 104967668 -145720186 - THE1B LTR MaLR 0 364 1 9877 110 43 27 chr2 104967668 104968945 -145718909 - THE1B-int LTR MaLR 0 1580 272 2049 122 0 0 chr2 104968945 104969223 -145718631 + AluSx SINE Alu 5 282 -30 9877 110 43 27 chr2 104969223 104969500 -145718354 - THE1B-int LTR MaLR -1308 272 1 1791 162 93 3 chr2 104969500 104969834 -145718020 - THE1B LTR MaLR 0 364 1 2593 112 2 20 chr2 104969834 104970074 -145717780 + L1PA10 LINE L1 5544 5781 -387 225 116 0 0 chr2 104970074 104970117 -145717737 - LTR66 LTR ERVL -174 436 394 2602 100 10 18 chr2 104970130 104970519 -145717335 + L1PA10 LINE L1 5782 6167 -1 28 91 0 0 chr2 104970807 104970884 -145716970 + AT_rich Low_complexity Low_complexity 1 77 0 230 151 12 116 chr2 104971827 104971913 -145715941 + MLT1J2 LTR MaLR 363 439 -11 207 0 0 0 chr2 104972144 104972167 -145715687 + (A)n Simple_repeat Simple_repeat 1 23 0 422 288 167 37 chr2 104972298 104973403 -145714451 - L1MEc LINE L1 -2579 3803 2555 573 264 84 80 chr2 104973505 104973678 -145714176 - L1MEc LINE L1 -4079 2484 2313 2044 128 0 0 chr2 104973678 104973689 -145714165 - AluSx SINE Alu -15 297 287 183 42 0 0 chr2 104973689 104973713 -145714141 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 2044 128 0 0 chr2 104973713 104973998 -145713856 - AluSx SINE Alu -24 288 1 573 264 84 80 chr2 104973998 104974264 -145713590 - L1MEc LINE L1 -4250 2313 2043 343 307 33 16 chr2 104974286 104974480 -145713374 - L1MEc LINE L1 -4478 1904 1697 380 275 217 59 chr2 104974496 104975155 -145712699 - L1MEc LINE L1 -4854 1530 768 2090 146 33 28 chr2 104976093 104976455 -145711399 + THE1B LTR MaLR 1 364 0 1599 240 149 29 chr2 104976723 104977278 -145710576 + MLT1E2 LTR MaLR 1 622 -4 284 258 0 0 chr2 104977399 104977461 -145710393 - MLT1B LTR MaLR -85 305 244 475 206 83 72 chr2 104977986 104978166 -145709688 + MLT1B LTR MaLR 58 239 -151 2270 99 0 7 chr2 104979477 104979771 -145708083 + AluSx SINE Alu 1 292 -20 1400 68 0 16 chr2 104980328 104980518 -145707336 - AluY SINE Alu -9 302 116 499 283 88 54 chr2 104980618 104980785 -145707069 + HAL1 LINE L1 686 846 -1661 2082 113 33 0 chr2 104980785 104981086 -145706768 + AluY SINE Alu 1 311 0 499 283 88 54 chr2 104981086 104981416 -145706438 + HAL1 LINE L1 846 1200 -1307 1296 289 68 46 chr2 104981435 104982385 -145705469 + HAL1 LINE L1 1247 2217 -290 285 200 18 0 chr2 104983414 104983469 -145704385 - MLT1K LTR MaLR -16 572 517 13746 225 27 20 chr2 104984103 104984737 -145703117 - L1PA16 LINE L1 -47 7557 6929 201 74 0 0 chr2 104984737 104984764 -145703090 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 13746 225 27 20 chr2 104984764 104985813 -145702041 - L1PA16 LINE L1 -675 6929 5889 261 57 0 0 chr2 104985813 104985848 -145702006 + (TG)n Simple_repeat Simple_repeat 2 36 0 13746 225 27 20 chr2 104985848 104989397 -145698457 - L1PA16 LINE L1 -1715 5889 2261 655 354 40 8 chr2 104990408 104990804 -145697050 - L1PA16 LINE L1 -7166 415 7 1415 181 118 18 chr2 104992953 104993285 -145694569 - MLT1A1 LTR MaLR 0 365 1 234 0 0 0 chr2 104993390 104993416 -145694438 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 698 61 0 41 chr2 104993417 104993515 -145694339 - L1PA8 LINE L1 -13 6159 6066 614 296 42 11 chr2 104993588 104993777 -145694077 - MIR SINE MIR -35 227 33 2400 66 0 25 chr2 104994493 104994811 -145693043 + AluY SINE Alu 1 310 -1 298 329 139 6 chr2 104995574 104995732 -145692122 + MIR SINE MIR 54 232 -30 246 62 0 0 chr2 104996112 104996144 -145691710 + (TG)n Simple_repeat Simple_repeat 2 33 0 203 269 0 0 chr2 104996385 104996437 -145691417 - L2 LINE L2 -4 3309 3258 31 0 0 0 chr2 104997159 104997190 -145690664 + AT_rich Low_complexity Low_complexity 1 31 0 220 192 39 0 chr2 104997985 104998037 -145689817 + (TA)n Simple_repeat Simple_repeat 1 54 0 843 169 8 0 chr2 104998222 104998352 -145689502 + AluSq/x SINE Alu 5 135 -177 453 293 83 32 chr2 104998535 104998915 -145688939 + L1ME LINE L1 5276 5669 -501 1817 167 41 0 chr2 104999752 104999871 -145687983 + AluSx SINE Alu 2 115 -197 234 0 0 0 chr2 104999871 104999897 -145687957 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 1817 167 41 0 chr2 104999897 105000071 -145687783 + AluSx SINE Alu 115 307 -5 203 313 60 0 chr2 105000665 105000732 -145687122 - L2 LINE L2 -75 3197 3127 23 0 0 0 chr2 105001336 105001359 -145686495 + AT_rich Low_complexity Low_complexity 1 23 0 2160 106 24 0 chr2 105001538 105001831 -145686023 + AluSx SINE Alu 1 300 -12 191 250 42 0 chr2 105002183 105002231 -145685623 - L2 LINE L2 0 3313 3264 24 0 0 0 chr2 105002328 105002352 -145685502 + AT_rich Low_complexity Low_complexity 1 24 0 463 295 76 9 chr2 105002448 105002658 -145685196 - MIR SINE MIR -2 260 37 1240 172 38 0 chr2 105002717 105002926 -145684928 + AluJo SINE Alu 83 299 -13 24 0 0 0 chr2 105003214 105003238 -145684616 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 105004483 105004512 -145683342 + AT_rich Low_complexity Low_complexity 1 29 0 1262 290 77 15 chr2 105005083 105005603 -145682251 - L1ME3 LINE L1 0 6162 5611 338 223 10 48 chr2 105005631 105005734 -145682120 + GA-rich Low_complexity Low_complexity 4 102 0 295 282 53 61 chr2 105005931 105006176 -145681678 + L1MEd LINE L1 606 848 -5271 1273 257 37 25 chr2 105006253 105006785 -145681069 + L1ME1 LINE L1 5527 6074 -90 2005 182 16 73 chr2 105007063 105007225 -145680629 + L1MC1 LINE L1 5169 5339 -994 5568 120 36 0 chr2 105007225 105008138 -145679716 + L1PA13 LINE L1 5206 6149 -14 2005 182 16 73 chr2 105008138 105008954 -145678900 + L1MC1 LINE L1 5339 6322 -11 317 343 52 17 chr2 105008985 105009218 -145678636 + L1M4 LINE L1 4101 4341 -1805 440 287 56 27 chr2 105010554 105010806 -145677048 - L2 LINE L2 -15 3298 2775 375 250 100 44 chr2 105011487 105011667 -145676187 + MLT1J LTR MaLR 75 264 -247 528 230 8 0 chr2 105011677 105011803 -145676051 + L1PB4 LINE L1 5954 6080 -76 948 133 0 87 chr2 105011841 105012037 -145675817 - L1MA5A LINE L1 -6 6291 6113 26 50 0 0 chr2 105012126 105012166 -145675688 + AT_rich Low_complexity Low_complexity 1 40 0 328 267 87 64 chr2 105012404 105012576 -145675278 + MLT1J LTR MaLR 304 479 -32 282 315 108 50 chr2 105012960 105013239 -145674615 + L3 LINE CR1 1278 1572 -5 2265 96 17 0 chr2 105013360 105013653 -145674201 - AluSx SINE Alu -10 302 5 1594 116 3 58 chr2 105013682 105013974 -145673880 - L1MA5A LINE L1 -6 6291 6016 3043 154 38 49 chr2 105014123 105014734 -145673120 - MER6A DNA MER2_type 0 605 2 22 0 0 0 chr2 105016279 105016301 -145671553 + AT_rich Low_complexity Low_complexity 1 22 0 2099 142 0 0 chr2 105017394 105017705 -145670149 - AluSx SINE Alu -1 311 1 240 100 0 0 chr2 105017908 105017948 -145669906 + (CA)n Simple_repeat Simple_repeat 1 40 0 1194 245 96 25 chr2 105018106 105018542 -145669312 - MLT1C LTR MaLR 0 467 1 221 154 320 0 chr2 105019431 105019509 -145668345 - MIR SINE MIR -70 192 90 584 284 85 35 chr2 105019620 105019937 -145667917 + L1ME3 LINE L1 5558 5890 -272 180 0 0 0 chr2 105020018 105020038 -145667816 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 24 53 0 0 chr2 105021274 105021312 -145666542 + AT_rich Low_complexity Low_complexity 1 38 0 44 84 0 0 chr2 105021465 105021572 -145666282 + AT_rich Low_complexity Low_complexity 1 107 0 452 299 125 10 chr2 105021658 105021860 -145665994 - MIR SINE MIR -12 250 22 181 104 83 0 chr2 105021860 105021908 -145665946 + (TTATA)n Simple_repeat Simple_repeat 2 53 0 218 165 77 33 chr2 105022174 105022265 -145665589 + (TATAA)n Simple_repeat Simple_repeat 5 99 0 342 296 64 64 chr2 105023723 105023956 -145663898 - MIR SINE MIR -12 250 18 840 189 17 6 chr2 105024354 105024534 -145663320 + MER53 DNA DNA 1 182 -7 200 275 130 0 chr2 105025852 105025921 -145661933 + L2 LINE L2 3236 3313 0 420 71 0 0 chr2 105026131 105026187 -145661667 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 645 352 20 4 chr2 105026333 105026580 -145661274 + L2 LINE L2 1933 2183 -1131 598 239 14 7 chr2 105026580 105026721 -145661133 - MER119 DNA MER1_type 0 583 442 1897 236 49 22 chr2 105026721 105027213 -145660641 + MLT1D LTR MaLR 1 505 0 1146 236 134 8 chr2 105027213 105027562 -145660292 - MER119 DNA MER1_type -137 446 54 577 223 33 144 chr2 105027584 105028041 -145659813 + L2 LINE L2 2177 2582 -732 689 261 28 9 chr2 105028179 105028390 -145659464 + MER20 DNA MER1_type 2 216 -3 421 337 0 0 chr2 105028515 105028693 -145659161 + G-rich Low_complexity Low_complexity 1 178 0 23 0 0 0 chr2 105028855 105028878 -145658976 + AT_rich Low_complexity Low_complexity 1 23 0 37 23 0 0 chr2 105028920 105028964 -145658890 + AT_rich Low_complexity Low_complexity 1 44 0 630 196 0 0 chr2 105029096 105029203 -145658651 + FRAM SINE Alu 4 110 -66 1826 135 10 7 chr2 105030158 105030461 -145657393 - AluSx SINE Alu -5 307 4 261 314 27 81 chr2 105030720 105030905 -145656949 - HERV16 LTR ERVL -4360 636 462 369 0 0 0 chr2 105030927 105030968 -145656886 + (T)n Simple_repeat Simple_repeat 1 41 0 525 299 89 52 chr2 105031101 105031749 -145656105 - L1MEc LINE L1 -2797 3283 2593 1874 134 28 0 chr2 105031749 105032033 -145655821 - AluSx SINE Alu -10 302 11 525 299 89 52 chr2 105032033 105032252 -145655602 - L1MEc LINE L1 -3487 2593 2384 310 280 60 33 chr2 105032590 105032740 -145655114 - L1MEc LINE L1 -4162 2099 1946 287 253 161 5 chr2 105032927 105033113 -145654741 - L1MEc LINE L1 -4444 1636 1422 384 264 99 92 chr2 105033113 105033397 -145654457 - L1MEc LINE L1 -4905 1165 880 1584 244 116 33 chr2 105033397 105033975 -145653879 - MLT1E2 LTR MaLR 0 626 1 228 187 93 0 chr2 105034039 105034114 -145653740 - L1MEc LINE L1 -5282 788 707 23 0 0 0 chr2 105034270 105034293 -145653561 + AT_rich Low_complexity Low_complexity 1 23 0 2300 261 67 15 chr2 105034750 105035960 -145651894 - L1ME1 LINE L1 -5 6161 4898 230 89 22 0 chr2 105036227 105036272 -145651582 + LTR66 LTR ERVL 394 439 -171 1021 219 40 59 chr2 105036279 105036513 -145651341 - L1ME1 LINE L1 -1300 4846 4622 1518 181 42 24 chr2 105036513 105036801 -145651053 + AluJo SINE Alu 5 297 -15 1021 219 40 59 chr2 105036801 105036990 -145650864 - L1ME1 LINE L1 -1524 4622 4431 503 332 73 18 chr2 105036990 105037264 -145650590 + L2 LINE L2 3024 3312 -1 228 241 19 0 chr2 105037757 105037811 -145650043 + (CA)n Simple_repeat Simple_repeat 2 56 0 27 73 0 0 chr2 105037976 105038031 -145649823 + AT_rich Low_complexity Low_complexity 1 55 0 5684 223 20 21 chr2 105038327 105040826 -145647028 - L1MC1 LINE L1 0 6613 4121 2182 83 9 28 chr2 105040840 105041164 -145646690 - L1PA8A LINE L1 -3 6128 5811 1957 132 3 12 chr2 105041292 105041619 -145646235 - L1PA8A LINE L1 -787 5359 5036 * 8531 172 6 18 chr2 105041609 105043246 -145644608 + L1P LINE L1 1111 2726 -3420 4735 227 54 32 chr2 105043255 105045467 -145642387 - L1MC1 LINE L1 -2303 4123 1862 2649 164 25 4 chr2 105045568 105046097 -145641757 + L1MA4 LINE L1 5753 6292 -8 3482 235 63 59 chr2 105046688 105048932 -145638922 + L1MC/D LINE L1 1469 3713 -2827 902 254 56 22 chr2 105048943 105049298 -145638556 + L1MC/D LINE L1 4082 4448 -2092 2148 238 93 42 chr2 105049307 105050359 -145637495 + L1MC/D LINE L1 4815 5915 -743 267 31 0 0 chr2 105050484 105050516 -145637338 + (TG)n Simple_repeat Simple_repeat 2 33 0 387 183 0 0 chr2 105050554 105050614 -145637240 + L1MC/D LINE L1 5916 5975 -661 306 50 0 0 chr2 105050859 105050899 -145636955 + (TG)n Simple_repeat Simple_repeat 2 41 0 300 120 0 0 chr2 105051014 105051064 -145636790 + (TTA)n Simple_repeat Simple_repeat 2 51 0 205 280 20 0 chr2 105051384 105051434 -145636420 - MIR SINE MIR -110 152 102 324 317 17 72 chr2 105054460 105054640 -145633214 + MIR SINE MIR 9 178 -84 6285 46 1 11 chr2 105055106 105055918 -145631936 + L1PA3 LINE L1 5346 6149 -6 1737 234 34 7 chr2 105055947 105056361 -145631493 + MLT1D LTR MaLR 81 505 0 1343 257 57 67 chr2 105057319 105057933 -145629921 + L1MC4 LINE L1 6475 7082 -960 2205 261 47 3 chr2 105057940 105058560 -145629294 + L1MC4 LINE L1 7254 7900 -142 249 214 0 0 chr2 105058565 105058621 -145629233 + L1MC4 LINE L1 7986 8041 -1 281 309 109 24 chr2 105059192 105059357 -145628497 + L2 LINE L2 3133 3311 -2 2268 148 5 35 chr2 105060021 105060454 -145627400 + L1MA7 LINE L1 5868 6287 -4 1950 105 11 14 chr2 105061088 105061387 -145626467 + AluSc SINE Alu 5 302 0 209 97 32 0 chr2 105061661 105061692 -145626162 + MIR SINE MIR 157 188 -74 339 306 122 14 chr2 105062352 105062499 -145625355 + L2 LINE L2 3110 3272 0 181 250 21 0 chr2 105063220 105063268 -145624586 + MIR SINE MIR 90 138 -70 22 35 0 0 chr2 105063757 105063786 -145624068 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr2 105065755 105065785 -145622069 + AT_rich Low_complexity Low_complexity 1 30 0 201 171 0 0 chr2 105066264 105066299 -145621555 + T-rich Low_complexity Low_complexity 1 35 0 279 0 0 0 chr2 105070139 105070170 -145617684 + (T)n Simple_repeat Simple_repeat 1 31 0 423 296 34 114 chr2 105070221 105070362 -145617492 + MIR SINE MIR 20 132 -130 2207 117 3 7 chr2 105070362 105070670 -145617184 + AluSc SINE Alu 1 307 -2 423 296 34 114 chr2 105070670 105070792 -145617062 + MIR SINE MIR 132 262 0 426 322 37 25 chr2 105072007 105072333 -145615521 + L1ME4a LINE L1 5525 5854 -267 414 0 0 0 chr2 105072364 105072410 -145615444 + (TTA)n Simple_repeat Simple_repeat 2 47 0 2115 115 0 0 chr2 105072417 105072696 -145615158 - AluSc SINE Alu -30 279 1 2209 234 46 28 chr2 105073724 105075574 -145612280 - L1MC3 LINE L1 -743 5403 4412 566 97 30 37 chr2 105075577 105075711 -145612143 + CT-rich Low_complexity Low_complexity 2 134 0 1396 251 37 50 chr2 105075713 105076248 -145611606 - L1MC3 LINE L1 -1753 4393 3866 281 368 8 0 chr2 105076398 105076531 -145611323 + MIR SINE MIR 125 258 -4 2093 137 0 0 chr2 105076940 105077232 -145610622 - AluSx SINE Alu -20 292 1 528 314 51 34 chr2 105078295 105078531 -145609323 + MIR SINE MIR 13 252 -10 21 36 0 0 chr2 105079179 105079207 -145608647 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 105081202 105081226 -145606628 + AT_rich Low_complexity Low_complexity 1 24 0 2388 232 73 21 chr2 105081289 105081766 -145606088 - L1MA9 LINE L1 -38 6274 5749 326 23 0 23 chr2 105081766 105081810 -145606044 + (CA)n Simple_repeat Simple_repeat 1 43 0 2388 232 73 21 chr2 105081810 105082012 -145605842 - L1MA9 LINE L1 -563 5749 5559 24 0 0 0 chr2 105083889 105083913 -145603941 + AT_rich Low_complexity Low_complexity 1 24 0 373 294 131 18 chr2 105084643 105084925 -145602929 + L1ME4a LINE L1 5764 6077 -44 269 256 23 23 chr2 105085139 105085225 -145602629 - L2 LINE L2 -37 3276 3191 225 119 0 0 chr2 105085390 105085432 -145602422 + (TG)n Simple_repeat Simple_repeat 2 43 0 261 232 29 0 chr2 105087906 105087975 -145599879 - L3 LINE CR1 -725 852 782 285 184 167 44 chr2 105088052 105088166 -145599688 - L1ME4a LINE L1 -56 6065 5938 702 298 70 63 chr2 105088309 105088722 -145599132 - L3 LINE CR1 -813 764 349 2704 236 2 16 chr2 105089522 105090082 -145597772 + MLT2B3 LTR ERVL 3 554 0 2024 122 0 0 chr2 105090151 105090421 -145597433 - AluSg SINE Alu -40 270 1 859 240 58 0 chr2 105090876 105091084 -145596770 + MER58A DNA MER1_type 5 224 0 2503 233 35 30 chr2 105092953 105093569 -145594285 - L1MD2 LINE L1 -405 6214 5603 5296 42 0 0 chr2 105093569 105094238 -145593616 - L1PA4 LINE L1 0 6155 5515 2503 233 35 30 chr2 105094238 105094970 -145592884 - L1MD2 LINE L1 -1016 5603 4860 255 173 0 0 chr2 105095001 105095053 -145592801 + (TG)n Simple_repeat Simple_repeat 1 52 0 28 29 0 0 chr2 105095067 105095102 -145592752 + AT_rich Low_complexity Low_complexity 1 35 0 521 167 185 9 chr2 105095102 105095318 -145592536 - L1MD2 LINE L1 -2832 3574 3321 783 280 37 22 chr2 105095322 105095593 -145592261 - MLT2D LTR ERVL -72 342 68 1146 254 35 3 chr2 105095613 105095956 -145591898 - L1MD2 LINE L1 -3141 3265 2912 2862 220 86 63 chr2 105095956 105097244 -145590610 - L1MD2 LINE L1 -4705 1701 369 682 109 34 8 chr2 105100318 105100437 -145587417 - AluY SINE Alu -23 288 167 206 347 13 13 chr2 105100641 105100716 -145587138 - MIR SINE MIR -110 98 24 1789 107 3 83 chr2 105101563 105101852 -145586002 + AluSx SINE Alu 40 305 -7 1633 71 5 0 chr2 105102078 105102316 -145585538 + L1PA7 LINE L1 5931 6169 0 228 342 0 0 chr2 105102634 105102710 -145585144 + L2 LINE L2 3237 3312 -1 22 0 0 0 chr2 105104296 105104318 -145583536 + AT_rich Low_complexity Low_complexity 1 22 0 1949 130 23 0 chr2 105104407 105104706 -145583148 - AluSx SINE Alu 0 312 7 224 313 0 0 chr2 105104807 105104874 -145582980 + CT-rich Low_complexity Low_complexity 6 72 0 1170 134 0 0 chr2 105105285 105105457 -145582397 + AluSq SINE Alu 142 313 0 29 0 0 0 chr2 105105932 105105961 -145581893 + AT_rich Low_complexity Low_complexity 1 29 0 1135 133 0 6 chr2 105107652 105107825 -145580029 - AluSq SINE Alu 0 313 142 224 313 0 0 chr2 105108236 105108303 -145579551 + GA-rich Low_complexity Low_complexity 6 72 0 1780 148 27 0 chr2 105108404 105108702 -145579152 + AluSx SINE Alu 7 312 0 1278 26 7 0 chr2 105109256 105109454 -145578400 + AluY SINE Alu 131 329 0 512 284 101 70 chr2 105109977 105110364 -145577490 - LTR33 LTR ERVL 0 521 123 721 331 112 28 chr2 105110374 105110901 -145576953 + L2 LINE L2 2741 3313 0 856 210 0 0 chr2 105110963 105111300 -145576554 + FRAM SINE Alu 1 337 0 663 13 0 0 chr2 105111300 105111376 -145576478 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 650 137 0 20 chr2 105111416 105111518 -145576336 - AluJb SINE Alu -24 288 189 1090 172 49 25 chr2 105111632 105111835 -145576019 + THE1B LTR MaLR 155 362 -2 24 32 0 0 chr2 105113745 105113776 -145574078 + AT_rich Low_complexity Low_complexity 1 31 0 1151 258 60 92 chr2 105114258 105114821 -145573033 - MER77 LTR ERV1 -7 598 54 473 315 174 54 chr2 105114853 105115286 -145572568 + L2 LINE L2 1356 1736 -1578 512 115 0 0 chr2 105115286 105115373 -145572481 - L1PB1 LINE L1 -1 6150 6064 473 315 174 54 chr2 105115373 105116043 -145571811 + L2 LINE L2 1736 2591 -723 262 374 102 61 chr2 105116405 105116651 -145571203 + L2 LINE L2 2985 3240 -32 456 136 0 12 chr2 105117234 105117315 -145570539 - MER116 DNA Mariner 0 80 1 880 282 120 39 chr2 105117838 105118321 -145569533 - L1ME3A LINE L1 -4 6166 5645 1606 262 89 102 chr2 105118397 105119713 -145568141 - L1ME3A LINE L1 -661 5509 4178 2327 82 48 0 chr2 105119713 105120007 -145567847 - AluSc SINE Alu 0 309 2 1606 262 89 102 chr2 105120007 105121389 -145566465 - L1ME3A LINE L1 -1992 4178 2845 2422 93 30 33 chr2 105121403 105121768 -145566086 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr2 105121947 105121968 -145565886 + AT_rich Low_complexity Low_complexity 1 21 0 306 87 0 0 chr2 105122726 105122772 -145565082 + (CA)n Simple_repeat Simple_repeat 2 47 0 2460 62 0 3 chr2 105124100 105124409 -145563445 + AluY SINE Alu 1 308 -3 1016 108 0 18 chr2 105124449 105124616 -145563238 - L1MA5A LINE L1 -111 6186 6023 525 141 0 20 chr2 105124616 105124713 -145563141 + L1MA5A LINE L1 6196 6292 -5 29 0 0 0 chr2 105124784 105124813 -145563041 + AT_rich Low_complexity Low_complexity 1 29 0 3305 202 37 24 chr2 105124880 105125154 -145562700 + L1MB4 LINE L1 4767 5036 -1144 1660 96 0 0 chr2 105125154 105125391 -145562463 + AluSg/x SINE Alu 79 315 0 3305 202 37 24 chr2 105125391 105126353 -145561501 + L1MB4 LINE L1 5036 6020 -160 4439 145 30 73 chr2 105126353 105127317 -145560537 - MER49 LTR ERV1 0 923 1 3305 202 37 24 chr2 105127317 105127374 -145560480 + L1MB4 LINE L1 6020 6075 -105 857 11 0 0 chr2 105127372 105127467 -145560387 - L1PA4 LINE L1 -530 5625 5531 * 4170 32 0 0 chr2 105127468 105127966 -145559888 + L1PA4 LINE L1 5655 6152 -3 487 171 43 0 chr2 105127966 105128080 -145559774 + L1MB3 LINE L1 6062 6183 0 1227 185 49 43 chr2 105128092 105128416 -145559438 + L1MC3 LINE L1 7458 7783 -2 815 153 14 14 chr2 105128813 105128957 -145558897 + AluJb SINE Alu 1 144 -168 426 240 55 32 chr2 105129276 105129493 -145558361 - L1MEc LINE L1 -4029 2367 2146 252 167 0 0 chr2 105129555 105129595 -145558259 - Tigger1 DNA MER2_type -2134 284 245 726 235 53 16 chr2 105129595 105129782 -145558072 + Tigger1 DNA MER2_type 1 194 -2224 * 982 153 132 11 chr2 105129749 105129938 -145557916 + Tigger1 DNA MER2_type 2207 2418 0 464 312 5 5 chr2 105129963 105130149 -145557705 - L1MEc LINE L1 -4578 1818 1633 1036 157 57 32 chr2 105130152 105130400 -145557454 - L1MB4 LINE L1 0 6180 5927 3520 251 64 19 chr2 105130403 105130928 -145556926 - L1MB4 LINE L1 -819 5327 4827 1032 72 0 0 chr2 105130928 105131066 -145556788 + (CTATT)n Simple_repeat Simple_repeat 3 140 0 3520 251 64 19 chr2 105131066 105131598 -145556256 - L1MB4 LINE L1 -1319 4827 4236 252 59 0 0 chr2 105131598 105131632 -145556222 + (TG)n Simple_repeat Simple_repeat 2 35 0 3520 251 64 19 chr2 105131632 105131799 -145556055 - L1MB4 LINE L1 -1910 4236 4078 195 69 0 0 chr2 105133886 105133915 -145553939 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2561 231 94 81 chr2 105134169 105135312 -145552542 + L1MCb LINE L1 8 1164 -4881 2724 23 0 0 chr2 105135532 105135836 -145552018 + AluY SINE Alu 1 304 -7 749 110 47 16 chr2 105135849 105136010 -145551844 + FLAM_C SINE Alu 13 177 0 2128 162 22 16 chr2 105136130 105136495 -145551359 - LTR32 LTR ERVL -5 466 100 890 338 18 14 chr2 105136595 105137104 -145550750 + L2 LINE L2 2638 3150 -163 1241 225 83 38 chr2 105137107 105137182 -145550672 - HsTC2 DNA Tc2 -1 1897 1827 3592 108 4 4 chr2 105137182 105137693 -145550161 - MER9 LTR ERVK 0 511 1 1241 225 83 38 chr2 105137693 105138061 -145549793 - HsTC2 DNA Tc2 -71 1827 1258 257 244 51 26 chr2 105138069 105138146 -145549708 - HsTC2 DNA Tc2 -1296 602 524 916 227 195 103 chr2 105138146 105138271 -145549583 + REP3 LTR ERV 1 113 -449 1559 214 4 0 chr2 105138271 105138552 -145549302 + AluJb SINE Alu 1 282 -30 916 227 195 103 chr2 105138552 105138923 -145548931 + REP3 LTR ERV 113 543 -19 * 1360 253 82 30 chr2 105138916 105139414 -145548440 - HsTC2 DNA Tc2 -1370 528 5 393 241 32 63 chr2 105139422 105139565 -145548289 + L2 LINE L2 3161 3300 -13 2345 102 0 9 chr2 105139565 105139880 -145547974 + AluSx SINE Alu 1 312 0 393 241 32 63 chr2 105139880 105139894 -145547960 + L2 LINE L2 3300 3313 0 297 0 0 0 chr2 105141948 105141981 -145545873 + (TG)n Simple_repeat Simple_repeat 1 33 0 39 84 0 0 chr2 105142062 105142157 -145545697 + AT_rich Low_complexity Low_complexity 1 95 0 22 106 0 0 chr2 105142607 105142692 -145545162 + AT_rich Low_complexity Low_complexity 1 85 0 234 328 98 25 chr2 105142704 105142826 -145545028 - L2 LINE L2 -1 3271 3141 227 174 0 0 chr2 105143456 105143502 -145544352 + LTR66 LTR ERVL 394 439 -171 244 202 0 124 chr2 105143539 105143628 -145544226 - L1MC4 LINE L1 -1340 6702 6625 4145 180 21 20 chr2 105143888 105145283 -145542571 + L1MA7 LINE L1 4698 6099 -192 2091 104 14 0 chr2 105145285 105145608 -145542246 + AluSx SINE Alu 1 327 0 606 264 8 53 chr2 105145735 105145981 -145541873 - L1MCa LINE L1 -1425 5001 4767 7511 201 80 24 chr2 105145987 105147649 -145540205 - MER52A LTR ERV1 0 1755 1 6624 232 43 24 chr2 105147652 105150224 -145537630 - L1MCa LINE L1 -1665 4761 2139 1454 201 4 7 chr2 105150224 105150497 -145537357 + AluJb SINE Alu 36 307 -5 2034 190 25 39 chr2 105150500 105150846 -145537008 - L1MCa LINE L1 -5979 447 106 1928 112 22 4 chr2 105150846 105151164 -145536690 + AluSg SINE Alu 1 323 0 2034 190 25 39 chr2 105151164 105151258 -145536596 - L1MCa LINE L1 -6320 106 12 * 4612 202 30 16 chr2 105151255 105152386 -145535468 - L1MC1 LINE L1 -30 6801 5652 1633 235 70 57 chr2 105152425 105152949 -145534905 - L1MC1 LINE L1 -1325 5319 4787 2071 112 0 0 chr2 105152949 105153225 -145534629 - AluSg SINE Alu 0 310 35 1633 235 70 57 chr2 105153225 105153393 -145534461 - L1MC1 LINE L1 -1857 4787 4623 408 198 0 198 chr2 105153374 105153546 -145534308 - L1 LINE L1 -1894 4750 4613 * 854 245 133 7 chr2 105153546 105153845 -145534009 + LTR52 LTR ERVL 1 337 -84 1357 263 80 27 chr2 105153845 105154321 -145533533 + MLT1D LTR MaLR 1 501 -4 728 239 70 32 chr2 105154452 105154737 -145533117 - L1 LINE L1 -2412 3734 3439 * 1299 264 89 27 chr2 105154712 105155264 -145532590 - L1MC1 LINE L1 -4961 1581 996 1586 245 61 8 chr2 105155464 105155986 -145531868 - L1M4 LINE L1 -2100 4046 3497 841 201 11 50 chr2 105156029 105156208 -145531646 - MER20 DNA MER1_type -3 216 45 1634 244 129 32 chr2 105156265 105156307 -145531547 - L1M4 LINE L1 -2694 3452 3415 1763 123 22 0 chr2 105156307 105156575 -145531279 + L1PA11 LINE L1 5894 6167 -7 1634 244 129 32 chr2 105156575 105157433 -145530421 - L1M4 LINE L1 -2731 3415 2465 1703 183 21 0 chr2 105157678 105157967 -145529887 + AluJb SINE Alu 1 295 -17 3373 117 4 4 chr2 105158708 105159213 -145528641 + L1PA15 LINE L1 5652 6156 -9 21 0 0 0 chr2 105159213 105159234 -145528620 + AT_rich Low_complexity Low_complexity 1 21 0 408 319 136 41 chr2 105159381 105159889 -145527965 - L1M4 LINE L1 -1186 4960 4405 292 307 66 27 chr2 105159948 105160358 -145527496 - L1M4 LINE L1 -1820 4326 3901 183 42 0 0 chr2 105160524 105160548 -145527306 + (CA)n Simple_repeat Simple_repeat 1 24 0 284 291 12 0 chr2 105160829 105160915 -145526939 + CT-rich Low_complexity Low_complexity 2 88 0 315 305 46 33 chr2 105161155 105161306 -145526548 - L2 LINE L2 -5 3267 3115 199 326 0 0 chr2 105161674 105161723 -145526131 - L2 LINE L2 -87 3185 3137 196 299 149 19 chr2 105161846 105162000 -145525854 - L2 LINE L2 -210 3062 2889 230 284 102 0 chr2 105162051 105162139 -145525715 - L2 LINE L2 -509 2805 2709 656 243 40 6 chr2 105162276 105162449 -145525405 - MIR SINE MIR -11 251 73 230 284 14 0 chr2 105165724 105165798 -145522056 + MER116 DNA Mariner 5 79 -1 331 26 0 0 chr2 105165999 105166038 -145521816 + (TTTA)n Simple_repeat Simple_repeat 2 108 0 1949 131 14 7 chr2 105166038 105166320 -145521534 - AluJb SINE Alu -28 284 1 637 252 10 39 chr2 105166563 105166769 -145521085 - MER3 DNA MER1_type -9 200 1 2239 75 20 7 chr2 105167313 105167606 -145520248 + AluSp SINE Alu 3 299 -14 184 203 203 16 chr2 105167845 105167909 -145519945 + L3b LINE CR1 1251 1326 -257 210 37 0 0 chr2 105168849 105168876 -145518978 + (GA)n Simple_repeat Simple_repeat 1 27 0 1564 241 61 46 chr2 105169834 105171247 -145516607 + L1MD2 LINE L1 26 1713 -4827 1387 194 67 30 chr2 105171243 105171645 -145516209 + L1MD2 LINE L1 2227 2643 -3897 * 6592 253 81 23 chr2 105171643 105172115 -145515739 + L1MD2 LINE L1 2918 3361 -3392 1990 135 10 0 chr2 105172115 105172419 -145515435 + AluSx SINE Alu 1 307 -5 6592 253 81 23 chr2 105172419 105174361 -145513493 + L1MD2 LINE L1 3361 5612 -1141 1666 143 34 3 chr2 105174361 105174654 -145513200 + L1MA5 LINE L1 5996 6297 -3 6592 253 81 23 chr2 105174654 105175856 -145511998 + L1MD2 LINE L1 5612 6743 -10 819 186 26 47 chr2 105175944 105176137 -145511717 + MER5A DNA MER1_type 1 189 0 29 0 0 0 chr2 105176651 105176680 -145511174 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 105176690 105176711 -145511143 + AT_rich Low_complexity Low_complexity 1 21 0 261 300 40 47 chr2 105177275 105177528 -145510326 + L1MEd LINE L1 597 847 -5272 1930 182 42 10 chr2 105177597 105177981 -145509873 - MSTD LTR MaLR 0 396 1 22 35 0 0 chr2 105178022 105178051 -145509803 + AT_rich Low_complexity Low_complexity 1 29 0 329 292 6 60 chr2 105178315 105178483 -145509371 + L1MB4 LINE L1 2 160 -6382 334 299 35 7 chr2 105178865 105179009 -145508845 + L1MB4 LINE L1 802 949 -5697 220 196 39 0 chr2 105179065 105179116 -145508738 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 4545 216 91 61 chr2 105179127 105180102 -145507752 + L1MB4 LINE L1 832 1776 -4868 1968 138 3 24 chr2 105180102 105180450 -145507404 + AluSx SINE Alu 1 312 0 4545 216 91 61 chr2 105180450 105182191 -145505663 + L1MB4 LINE L1 1776 3585 -3059 1318 191 46 113 chr2 105182191 105182484 -145505370 + L1MB4 LINE L1 4363 4609 -2035 1757 49 5 0 chr2 105182484 105182708 -145505146 - L1PA5 LINE L1 -6 6148 5924 1318 191 46 113 chr2 105182708 105182918 -145504936 + L1MB4 LINE L1 4609 4832 -1812 192 97 0 0 chr2 105183373 105183404 -145504450 + (GA)n Simple_repeat Simple_repeat 1 31 0 582 126 95 0 chr2 105183665 105183876 -145503978 - L1MA6 LINE L1 -10 6290 6026 4255 208 64 15 chr2 105183909 105185700 -145502154 + L1MB4 LINE L1 4805 6678 0 4666 212 41 80 chr2 105185985 105187496 -145500358 + L1ME1 LINE L1 3892 5302 -864 1693 95 0 0 chr2 105187496 105187717 -145500137 + AluY SINE Alu 86 306 -5 4666 212 41 80 chr2 105187717 105188367 -145499487 + L1ME1 LINE L1 5302 5975 -191 236 127 159 32 chr2 105188367 105188430 -145499424 + L1MB7 LINE L1 6051 6121 -57 1749 170 0 24 chr2 105188495 105188583 -145499271 + AluJb SINE Alu 7 96 -216 1991 153 36 8 chr2 105188583 105188948 -145498906 - THE1C LTR MaLR 0 375 1 1749 170 0 24 chr2 105188948 105189153 -145498701 + AluJb SINE Alu 96 293 -19 1076 103 0 0 chr2 105189184 105189329 -145498525 - AluY SINE Alu -4 307 163 2311 112 36 20 chr2 105189851 105190209 -145497645 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr2 105190995 105191017 -145496837 + AT_rich Low_complexity Low_complexity 1 22 0 267 288 74 89 chr2 105194800 105195057 -145492797 + L1ME LINE L1 5564 5818 -303 2031 113 0 11 chr2 105195188 105195470 -145492384 + AluY SINE Alu 1 279 -32 267 54 0 0 chr2 105195470 105195507 -145492347 + (CAAT)n Simple_repeat Simple_repeat 4 40 0 29 47 0 0 chr2 105195976 105196019 -145491835 + AT_rich Low_complexity Low_complexity 1 43 0 266 180 230 20 chr2 105196733 105196833 -145491021 + LTR54 LTR ERV1 60 180 -330 31 0 0 0 chr2 105197156 105197187 -145490667 + AT_rich Low_complexity Low_complexity 1 31 0 2103 188 56 9 chr2 105197288 105197736 -145490118 - L1MC1 LINE L1 0 6333 5865 773 120 56 7 chr2 105197738 105197880 -145489974 + L1MA4 LINE L1 6146 6294 -6 2117 107 3 3 chr2 105197883 105198173 -145489681 - AluSg SINE Alu -20 290 1 294 191 0 16 chr2 105198191 105198254 -145489600 - L1MC1 LINE L1 -1286 4860 4799 239 200 0 33 chr2 105203079 105203139 -145484715 + GA-rich Low_complexity Low_complexity 3 60 0 405 173 9 18 chr2 105203155 105203265 -145484589 + GA-rich Low_complexity Low_complexity 2 110 0 180 318 74 40 chr2 105205410 105205586 -145482268 + L2 LINE L2 2813 2994 -278 * 217 307 181 16 chr2 105205568 105205695 -145482159 - L2 LINE L2 -1 3271 3124 324 64 0 0 chr2 105205774 105205821 -145482033 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 28 48 0 0 chr2 105205839 105205881 -145481973 + AT_rich Low_complexity Low_complexity 1 42 0 435 145 0 0 chr2 105206005 105206088 -145481766 + (TGGA)n Simple_repeat Simple_repeat 4 86 0 24 85 0 0 chr2 105206511 105206570 -145481284 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr2 105209023 105209044 -145478810 + AT_rich Low_complexity Low_complexity 1 21 0 613 179 117 37 chr2 105209388 105209550 -145478304 + MER3 DNA MER1_type 1 128 -81 592 272 117 10 chr2 105209553 105209759 -145478095 + MIR SINE MIR 32 259 -3 2134 183 54 22 chr2 105211342 105211883 -145475971 - Charlie2 DNA MER1_type 0 2862 2305 573 281 78 37 chr2 105211946 105212163 -145475691 - Charlie2 DNA MER1_type -2160 622 397 612 269 167 27 chr2 105212496 105212867 -145474987 + MLT1H LTR MaLR 127 549 0 22 0 0 0 chr2 105213013 105213035 -145474819 + AT_rich Low_complexity Low_complexity 1 22 0 690 281 87 12 chr2 105213866 105214119 -145473735 - MER46C DNA MER2_type 0 338 67 23 0 0 0 chr2 105214681 105214704 -145473150 + AT_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr2 105214878 105214915 -145472939 + AT_rich Low_complexity Low_complexity 1 37 0 518 299 30 99 chr2 105215026 105215420 -145472434 + MLT1I LTR MaLR 40 406 -3 3570 137 23 48 chr2 105216282 105216990 -145470864 + L1MA7 LINE L1 5596 6285 -6 613 192 55 0 chr2 105216846 105216992 -145470862 + L1MA7 LINE L1 6134 6287 -4 854 239 0 17 chr2 105217700 105217876 -145469978 - FAM SINE Alu -2 173 1 1577 161 25 21 chr2 105222300 105222579 -145465275 - AluJb SINE Alu -24 288 9 28 29 0 0 chr2 105223468 105223503 -145464351 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 105225786 105225809 -145462045 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 105226989 105227010 -145460844 + AT_rich Low_complexity Low_complexity 1 21 0 221 275 28 73 chr2 105229214 105229323 -145458531 + MIR SINE MIR 44 147 -115 293 279 59 94 chr2 105229426 105229680 -145458174 + L2 LINE L2 3069 3313 0 1971 63 0 22 chr2 105230240 105230508 -145457346 - AluY SINE Alu -6 305 44 1897 155 20 0 chr2 105233323 105233600 -145454254 + AluSx SINE Alu 1 286 -26 297 0 0 0 chr2 105233600 105233633 -145454221 + (CA)n Simple_repeat Simple_repeat 2 34 0 1897 155 20 0 chr2 105233633 105233659 -145454195 + AluSx SINE Alu 286 310 -2 235 263 50 30 chr2 105234232 105234331 -145453523 - Charlie5 DNA MER1_type -27 2585 2485 560 123 115 31 chr2 105234531 105234661 -145453193 - MER53 DNA DNA -1 188 48 524 303 32 12 chr2 105234735 105234927 -145452927 - MIR SINE MIR -46 216 24 26 64 0 0 chr2 105235715 105235762 -145452092 + AT_rich Low_complexity Low_complexity 1 47 0 544 270 170 41 chr2 105236246 105237292 -145450562 + L1MEc LINE L1 1407 2552 -3663 431 172 46 17 chr2 105237327 105237501 -145450353 + (TA)n Simple_repeat Simple_repeat 1 179 0 207 151 41 27 chr2 105237476 105237549 -145450305 + (TATAA)n Simple_repeat Simple_repeat 5 78 0 * 448 204 11 0 chr2 105237562 105237738 -145450116 + (TA)n Simple_repeat Simple_repeat 1 178 0 258 211 0 0 chr2 105237772 105237876 -145449978 + (TA)n Simple_repeat Simple_repeat 2 105 0 384 296 19 6 chr2 105238048 105238207 -145449647 + L1MEc LINE L1 3313 3473 -2742 328 351 58 8 chr2 105238224 105238483 -145449371 + L1M4 LINE L1 2435 2706 -3440 196 304 63 38 chr2 105239462 105239541 -145448313 - MIR SINE MIR -11 251 171 21 36 0 0 chr2 105239676 105239704 -145448150 + AT_rich Low_complexity Low_complexity 1 28 0 180 152 0 0 chr2 105240797 105240830 -145447024 + GA-rich Low_complexity Low_complexity 1 33 0 29 47 0 0 chr2 105241861 105241904 -145445950 + AT_rich Low_complexity Low_complexity 1 43 0 1217 28 0 0 chr2 105242067 105242212 -145445642 - L1PA4 LINE L1 -3 6152 6008 22 0 0 0 chr2 105242738 105242760 -145445094 + AT_rich Low_complexity Low_complexity 1 22 0 260 333 23 0 chr2 105242815 105242902 -145444952 + L2 LINE L2 3184 3272 0 197 346 106 10 chr2 105242986 105243090 -145444764 - L2 LINE L2 -23 3290 3177 183 271 0 0 chr2 105244491 105244550 -145443304 + (TA)n Simple_repeat Simple_repeat 1 59 0 203 259 35 0 chr2 105245652 105245710 -145442144 + GA-rich Low_complexity Low_complexity 3 62 0 234 91 0 0 chr2 105245764 105245797 -145442057 + (T)n Simple_repeat Simple_repeat 1 33 0 200 255 20 0 chr2 105246767 105246818 -145441036 - L2 LINE L2 0 3313 3262 263 229 96 12 chr2 105247053 105247136 -145440718 + MIR SINE MIR 65 154 -108 311 73 0 0 chr2 105247142 105247183 -145440671 - MSTC LTR MaLR 0 428 388 50 31 0 0 chr2 105247190 105247254 -145440600 + AT_rich Low_complexity Low_complexity 1 64 0 1980 154 0 0 chr2 105247265 105247563 -145440291 + AluSx SINE Alu 11 308 -4 1996 176 14 14 chr2 105247566 105247923 -145439931 - MSTC LTR MaLR -71 357 1 213 301 121 0 chr2 105247928 105248011 -145439843 + MIR SINE MIR 160 252 -10 559 151 0 0 chr2 105248554 105248647 -145439207 - L1MA4A LINE L1 -23 6280 6188 4278 151 36 21 chr2 105248651 105249489 -145438365 - L1MA4A LINE L1 -182 6121 5261 1873 184 56 62 chr2 105249604 105250089 -145437765 + MER31A LTR ERV1 4 485 0 637 275 103 38 chr2 105250330 105251188 -145436666 - L1ME3A LINE L1 -287 5875 4943 180 125 0 0 chr2 105251239 105251271 -145436583 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 305 377 13 13 chr2 105251381 105251540 -145436314 + L2 LINE L2 2676 2834 -480 1989 178 151 13 chr2 105251586 105252168 -145435686 + MER39 LTR ERV1 1 707 0 237 65 0 0 chr2 105252477 105252508 -145435346 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr2 105253025 105253050 -145434804 + AT_rich Low_complexity Low_complexity 1 25 0 242 354 87 19 chr2 105255573 105255734 -145432120 - MIR SINE MIR -34 228 57 217 319 203 12 chr2 105255800 105255963 -145431891 - L2 LINE L2 -85 3187 2994 22 0 0 0 chr2 105257260 105257282 -145430572 + AT_rich Low_complexity Low_complexity 1 22 0 43 20 0 0 chr2 105258986 105259036 -145428818 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 105265665 105265687 -145422167 + AT_rich Low_complexity Low_complexity 1 22 0 678 249 5 49 chr2 105265923 105266108 -145421746 - MIR SINE MIR -49 213 37 210 118 0 0 chr2 105266494 105266528 -145421326 + (CA)n Simple_repeat Simple_repeat 1 34 0 1205 238 58 25 chr2 105266585 105266947 -145420907 + MLT1A2 LTR MaLR 1 374 0 355 306 105 0 chr2 105267110 105267234 -145420620 - L2 LINE L2 -244 3069 2933 2064 91 0 7 chr2 105267235 105267563 -145420291 + AluY SINE Alu 1 326 0 6683 183 60 25 chr2 105267571 105269296 -145418558 - L1MCa LINE L1 -4591 1835 5 356 319 9 9 chr2 105269734 105269847 -145418007 + L2 LINE L2 3196 3308 -5 22 0 0 0 chr2 105270305 105270327 -145417527 + AT_rich Low_complexity Low_complexity 1 22 0 249 369 131 0 chr2 105270464 105270624 -145417230 + L2 LINE L2 2605 2785 -529 276 319 47 65 chr2 105270627 105270796 -145417058 + L2 LINE L2 2500 2665 -649 668 274 54 34 chr2 105271014 105271310 -145416544 + LTR33A LTR ERVL 222 523 0 393 349 101 23 chr2 105271310 105271744 -145416110 + L2 LINE L2 2748 3263 -9 203 248 136 48 chr2 105272033 105272158 -145415696 + MER5B DNA MER1_type 43 178 0 320 347 80 19 chr2 105272266 105272286 -145415568 - L2 LINE L2 -448 2866 2849 185 0 40 0 chr2 105272286 105272311 -145415543 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 320 347 80 19 chr2 105272311 105272503 -145415351 - L2 LINE L2 -465 2849 2641 23 33 0 0 chr2 105273728 105273758 -145414096 + AT_rich Low_complexity Low_complexity 1 30 0 232 294 0 35 chr2 105274119 105274204 -145413650 - L2 LINE L2 0 3313 3232 297 0 0 0 chr2 105274810 105274843 -145413011 + (CA)n Simple_repeat Simple_repeat 2 34 0 308 296 70 86 chr2 105274997 105275382 -145412472 - L2 LINE L2 -64 3249 2871 316 222 63 90 chr2 105275492 105275681 -145412173 - L1ME4a LINE L1 -11 6110 5927 266 296 61 24 chr2 105275949 105276144 -145411710 - L1M4 LINE L1 -2292 3854 3654 36 53 0 0 chr2 105276301 105276358 -145411496 + AT_rich Low_complexity Low_complexity 1 57 0 529 260 137 0 chr2 105277727 105277873 -145409981 - MIR SINE MIR -55 207 42 200 210 25 25 chr2 105277964 105278045 -145409809 + (TA)n Simple_repeat Simple_repeat 2 82 0 21 0 0 0 chr2 105278554 105278575 -145409279 + AT_rich Low_complexity Low_complexity 1 21 0 201 121 0 0 chr2 105278592 105278625 -145409229 + (TG)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr2 105279525 105279555 -145408299 + AT_rich Low_complexity Low_complexity 1 30 0 216 0 0 0 chr2 105282179 105282203 -145405651 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1923 136 4 0 chr2 105282206 105282486 -145405368 - AluSx SINE Alu -31 281 1 1821 165 100 35 chr2 105282704 105283104 -145404750 - MSTA LTR MaLR 0 428 3 236 302 0 0 chr2 105283501 105283564 -145404290 + MER5A DNA MER1_type 79 141 -48 1855 109 3 28 chr2 105284204 105284488 -145403366 + AluSx SINE Alu 23 299 -13 257 296 0 34 chr2 105286086 105286174 -145401680 + L1M4 LINE L1 2635 2719 -3427 252 286 0 0 chr2 105286278 105286341 -145401513 + A-rich Low_complexity Low_complexity 1 63 0 26 30 0 0 chr2 105286349 105286382 -145401472 + AT_rich Low_complexity Low_complexity 1 33 0 351 335 51 35 chr2 105286393 105286647 -145401207 + L1M4 LINE L1 2926 3183 -2963 21 0 0 0 chr2 105287127 105287148 -145400706 + AT_rich Low_complexity Low_complexity 1 21 0 462 257 76 41 chr2 105287244 105287523 -145400331 + L1M4 LINE L1 5271 5555 -607 1742 170 10 26 chr2 105287718 105288054 -145399800 + AluJo SINE Alu 7 337 0 22 70 0 0 chr2 105288199 105288242 -145399612 + AT_rich Low_complexity Low_complexity 1 43 0 6371 181 19 23 chr2 105288833 105289806 -145398048 - L1 LINE L1 -993 5153 4185 2060 121 0 0 chr2 105289806 105290117 -145397737 - AluSg SINE Alu 0 311 1 6371 181 19 23 chr2 105290117 105290485 -145397369 - L1 LINE L1 -1961 4185 3817 1064 152 0 6 chr2 105290489 105290660 -145397194 + L1M1 LINE L1 5485 5654 -646 26 50 0 0 chr2 105291044 105291084 -145396770 + AT_rich Low_complexity Low_complexity 1 40 0 7103 43 0 1 chr2 105291839 105292759 -145395095 + L1PA4 LINE L1 5220 6148 -7 243 0 0 0 chr2 105292759 105292786 -145395068 + (TA)n Simple_repeat Simple_repeat 2 28 0 189 0 0 0 chr2 105294050 105294071 -145393783 + (TG)n Simple_repeat Simple_repeat 2 22 0 228 169 34 34 chr2 105294464 105294523 -145393331 + L1MC4 LINE L1 6648 6706 -1336 258 235 15 0 chr2 105294527 105294595 -145393259 + (TA)n Simple_repeat Simple_repeat 1 69 0 1733 130 29 44 chr2 105295313 105295629 -145392225 + MSTB LTR MaLR 1 311 -115 561 305 107 7 chr2 105295814 105296086 -145391768 - L1M4 LINE L1 -5751 791 493 * 4743 248 61 15 chr2 105296085 105298060 -145389794 - L1ME2 LINE L1 -226 6436 4358 1239 246 56 36 chr2 105298066 105298491 -145389363 - MLT1D LTR MaLR -8 497 68 3285 125 35 2 chr2 105298541 105299061 -145388793 + L1PA15 LINE L1 5610 6146 -19 1023 252 8 15 chr2 105299071 105299333 -145388521 - L1MD1 LINE L1 -53 6189 5930 1073 45 0 0 chr2 105299333 105299527 -145388327 + L1PA3 LINE L1 6024 6217 0 2653 231 31 5 chr2 105299527 105299963 -145387891 - L1MD1 LINE L1 -307 5935 5468 225 0 0 0 chr2 105299963 105299988 -145387866 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2653 231 31 5 chr2 105299988 105300353 -145387501 - L1MD1 LINE L1 -774 5468 5114 1292 213 36 36 chr2 105300359 105300716 -145387138 - L1ME2 LINE L1 -2360 4284 3928 * 1372 281 22 48 chr2 105300711 105301249 -145386605 - L1ME2 LINE L1 -6003 539 16 237 216 52 52 chr2 105301550 105301666 -145386188 - L1MC5 LINE L1 -34 7927 7812 265 304 55 99 chr2 105302961 105303090 -145384764 + L2 LINE L2 2217 2336 -978 1800 153 18 0 chr2 105303090 105303427 -145384427 - AluSx SINE Alu 0 342 1 265 304 55 99 chr2 105303427 105303497 -145384357 + L2 LINE L2 2336 2408 -906 753 148 0 0 chr2 105353500 105353622 -145334232 - MER51-int LTR ERV1 -2582 3364 3243 * 2789 120 50 17 chr2 105353620 105354264 -145333590 - MER51-int LTR ERV1 -3673 4143 3352 351 125 36 0 chr2 105354252 105354308 -145333546 - MER51-int LTR ERV1 -3722 2224 2167 * 1105 80 0 7 chr2 105354307 105354457 -145333397 - MER51-int LTR ERV1 -3932 2014 1866 874 137 77 40 chr2 105354457 105354700 -145333154 - MER51-int LTR ERV1 -4232 3584 648 648 171 12 3 chr2 105354800 105354927 -145332927 - L1P LINE L1 -2534 3612 3485 1283 122 6 0 chr2 105354930 105355102 -145332752 - AluJb SINE Alu -19 293 121 2753 245 14 12 chr2 105355155 105355966 -145331888 - L1P LINE L1 -2653 3493 2682 674 187 128 59 chr2 105356070 105356217 -145331637 - Charlie4 DNA MER1_type -1719 242 76 2174 121 3 10 chr2 105356217 105356524 -145331330 - AluSx SINE Alu -7 305 1 674 187 128 59 chr2 105356524 105356579 -145331275 - Charlie4 DNA MER1_type -1885 76 26 2399 282 67 23 chr2 105357694 105358912 -145328942 - L1 LINE L1 -1543 4603 3332 517 209 36 0 chr2 105359014 105359124 -145328730 - MLT1G LTR MaLR -57 533 420 2621 138 9 14 chr2 105359549 105359991 -145327863 + L1MC1 LINE L1 5889 6328 -5 997 282 42 18 chr2 105360382 105360715 -145327139 + L3b LINE CR1 1112 1452 -131 421 32 32 0 chr2 105361153 105361216 -145326638 + (TCTA)n Simple_repeat Simple_repeat 3 67 0 344 268 18 6 chr2 105361216 105361380 -145326474 + (TA)n Simple_repeat Simple_repeat 2 167 0 293 309 13 34 chr2 105361386 105361535 -145326319 + L1MEd LINE L1 1090 1235 -4884 326 283 95 82 chr2 105361563 105361867 -145325987 + L1MEd LINE L1 1301 1608 -4521 2122 118 0 3 chr2 105362257 105362553 -145325301 - AluSx SINE Alu -17 295 1 236 255 160 28 chr2 105364075 105364181 -145323673 + MIR SINE MIR 20 139 -69 1217 152 91 54 chr2 105364396 105364693 -145323161 + MER33 DNA MER1_type 17 324 0 837 217 29 6 chr2 105366119 105366294 -145321560 - L1MC3 LINE L1 -588 7197 7019 242 347 58 8 chr2 105366328 105366449 -145321405 - MIR3 SINE MIR -15 193 67 2553 192 34 16 chr2 105366823 105367378 -145320476 - L1MD2 LINE L1 -1 7764 6227 303 239 11 22 chr2 105367399 105367491 -145320363 - MLT1F1 LTR MaLR -442 125 35 202 314 136 14 chr2 105368016 105368156 -145319698 - L2 LINE L2 -1 3271 3115 2380 109 0 0 chr2 105371700 105372012 -145315842 + AluSq SINE Alu 1 312 -1 516 319 75 0 chr2 105372629 105372789 -145315065 + MER91A DNA MER1_type 9 180 -16 634 257 20 0 chr2 105372894 105373046 -145314808 - MER112 DNA MER1_type -102 158 4 2348 80 0 0 chr2 105373402 105373691 -145314163 - AluSg SINE Alu -13 297 9 236 254 97 18 chr2 105374296 105374410 -145313444 - MIR3 SINE MIR -18 190 68 1679 201 7 0 chr2 105375308 105375617 -145312237 - AluJb SINE Alu -1 311 1 613 297 151 0 chr2 105376260 105376479 -145311375 + MIR SINE MIR 10 261 -1 3103 123 25 31 chr2 105376526 105377036 -145310818 + L1MA6 LINE L1 5794 6300 0 882 216 77 0 chr2 105377739 105377933 -145309921 + MER3 DNA MER1_type 1 209 0 416 283 57 49 chr2 105384411 105384655 -145303199 - LTR16A1 LTR ERVL -2 455 210 496 311 23 62 chr2 105384849 105385106 -145302748 + MIR SINE MIR 9 255 -7 212 107 27 71 chr2 105385406 105385518 -145302336 + G-rich Low_complexity Low_complexity 4 110 0 36 0 0 0 chr2 105388792 105388828 -145299026 + AT_rich Low_complexity Low_complexity 1 36 0 222 276 23 11 chr2 105391354 105391441 -145296413 + (TA)n Simple_repeat Simple_repeat 1 88 0 217 194 0 56 chr2 105393075 105393147 -145294707 + A-rich Low_complexity Low_complexity 3 70 0 32 43 0 0 chr2 105393648 105393694 -145294160 + AT_rich Low_complexity Low_complexity 1 46 0 200 179 0 60 chr2 105394355 105394439 -145293415 + A-rich Low_complexity Low_complexity 1 79 0 319 184 31 61 chr2 105394761 105394924 -145292930 + (CACCC)n Simple_repeat Simple_repeat 3 160 0 192 77 0 0 chr2 105396086 105396112 -145291742 + (CA)n Simple_repeat Simple_repeat 2 27 0 183 42 0 0 chr2 105398924 105398948 -145288906 + (CA)n Simple_repeat Simple_repeat 2 25 0 242 342 0 0 chr2 105399088 105399237 -145288617 + G-rich Low_complexity Low_complexity 1 149 0 * 439 201 41 18 chr2 105399216 105399454 -145288400 + (GGGTG)n Simple_repeat Simple_repeat 1 243 0 235 290 29 0 chr2 105401471 105401540 -145286314 + MIR SINE MIR 73 143 -119 39 22 0 0 chr2 105402093 105402139 -145285715 + AT_rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr2 105402278 105402306 -145285548 + AT_rich Low_complexity Low_complexity 1 28 0 2081 88 14 10 chr2 105402874 105403168 -145284686 + AluSg1 SINE Alu 1 295 -14 43 35 0 0 chr2 105403215 105403272 -145284582 + AT_rich Low_complexity Low_complexity 1 57 0 267 175 0 0 chr2 105405614 105405671 -145282183 + (TA)n Simple_repeat Simple_repeat 1 57 0 217 65 0 81 chr2 105405721 105405783 -145282071 + (TA)n Simple_repeat Simple_repeat 2 58 0 583 72 5 83 chr2 105405795 105405988 -145281866 + (TA)n Simple_repeat Simple_repeat 1 178 0 2169 114 3 3 chr2 105406746 105407045 -145280809 - AluY SINE Alu -12 299 1 2328 70 7 3 chr2 105407653 105407951 -145279903 - AluY SINE Alu -12 299 1 21 0 0 0 chr2 105407969 105407990 -145279864 + AT_rich Low_complexity Low_complexity 1 21 0 8198 20 0 1 chr2 105408004 105409562 -145278292 - L1PA3 LINE L1 0 6155 4622 681 294 116 43 chr2 105409948 105410319 -145277535 + MLT1I LTR MaLR 4 401 -8 197 167 146 0 chr2 105412253 105412301 -145275553 - MIR SINE MIR -75 187 133 21 36 0 0 chr2 105412460 105412488 -145275366 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 105413044 105413073 -145274781 + AT_rich Low_complexity Low_complexity 1 29 0 320 258 0 0 chr2 105414126 105414192 -145273662 + L2 LINE L2 3199 3264 -8 333 0 0 0 chr2 105414912 105414949 -145272905 + (T)n Simple_repeat Simple_repeat 1 37 0 1989 189 17 3 chr2 105416610 105416970 -145270884 + MLT1A1 LTR MaLR 1 365 0 214 303 13 0 chr2 105417017 105417093 -145270761 + MIR SINE MIR 186 262 0 261 380 47 0 chr2 105417733 105417862 -145269992 - MIR SINE MIR -82 180 46 1690 171 79 83 chr2 105420120 105420519 -145267335 + MSTB2 LTR MaLR 3 402 -55 2258 78 0 3 chr2 105420519 105420801 -145267053 + AluY SINE Alu 1 281 -30 217 0 0 0 chr2 105420801 105420825 -145267029 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 1690 171 79 83 chr2 105420825 105420881 -145266973 + MSTB2 LTR MaLR 402 457 0 359 312 89 0 chr2 105421544 105421701 -145266153 + L2 LINE L2 2366 2536 -778 1125 158 0 30 chr2 105421707 105421909 -145265945 + AluJo SINE Alu 87 282 -30 627 336 79 45 chr2 105421958 105422534 -145265320 + L2 LINE L2 2711 3303 -10 1965 293 109 20 chr2 105422615 105423719 -145264135 + L2 LINE L2 2036 3238 -75 4041 180 30 22 chr2 105423849 105424985 -145262869 + L1MB8 LINE L1 4961 6098 -80 565 255 55 7 chr2 105424988 105425133 -145262721 + L2 LINE L2 3158 3309 -4 22 56 0 0 chr2 105426195 105426231 -145261623 + AT_rich Low_complexity Low_complexity 1 36 0 1306 128 20 0 chr2 105427189 105427393 -145260461 + Tigger3(Golem) DNA MER2_type 2822 3029 0 2247 105 0 3 chr2 105428623 105428919 -145258935 + AluSq SINE Alu 1 295 -18 469 249 92 97 chr2 105428957 105429127 -145258727 + L1ME1 LINE L1 2788 2957 -3189 2305 82 0 3 chr2 105429127 105429421 -145258433 + AluY SINE Alu 1 293 -18 469 249 92 97 chr2 105429421 105429620 -145258234 + L1ME1 LINE L1 2957 3155 -2991 598 331 139 26 chr2 105429949 105430610 -145257244 - L1M4 LINE L1 -1388 4758 4023 6884 228 93 17 chr2 105430632 105434306 -145253548 + L1MD2 LINE L1 2388 6349 -10 367 249 99 64 chr2 105434332 105434549 -145253305 - L1M4 LINE L1 -2246 3900 3662 2195 213 26 20 chr2 105435264 105436235 -145251619 + L1ME1 LINE L1 4895 5868 -298 447 297 16 54 chr2 105436661 105436846 -145251008 - MER8 DNA MER2_type -60 179 2 182 330 23 23 chr2 105436924 105437012 -145250842 - L2 LINE L2 0 3313 3226 247 310 58 19 chr2 105437366 105437521 -145250333 + L1MEd LINE L1 3 163 -5956 592 302 51 60 chr2 105437793 105438247 -145249607 + L1M4 LINE L1 4733 5182 -964 186 304 0 0 chr2 105438583 105438629 -145249225 - L2 LINE L2 -1 3271 3226 515 305 0 40 chr2 105438633 105438784 -145249070 - MIR SINE MIR -101 161 17 212 339 0 0 chr2 105438793 105438855 -145248999 + (TATATG)n Simple_repeat Simple_repeat 4 65 0 324 0 0 0 chr2 105439697 105439733 -145248121 + (TG)n Simple_repeat Simple_repeat 2 37 0 699 245 130 5 chr2 105440292 105440508 -145247346 + MIR SINE MIR 5 247 -15 23 33 0 0 chr2 105441981 105442011 -145245843 + AT_rich Low_complexity Low_complexity 1 30 0 725 271 35 31 chr2 105444787 105445016 -145242838 - L3 LINE CR1 -4 1573 1344 729 200 113 0 chr2 105445055 105445215 -145242639 + MER45A DNA AcHobo 1 178 0 349 289 40 12 chr2 105445573 105445701 -145242153 + MIR SINE MIR 5 140 -68 2414 44 0 0 chr2 105446935 105447210 -145240644 - AluY SINE Alu -16 295 21 924 220 37 14 chr2 105447635 105447985 -145239869 - L1M4 LINE L1 -2884 3262 2905 * 1702 272 58 26 chr2 105447974 105448580 -145239274 - L1MDb LINE L1 -5777 632 8 617 147 37 0 chr2 105452477 105452586 -145235268 + FLAM_C SINE Alu 11 123 -20 676 206 186 28 chr2 105452645 105452898 -145234956 + MLT1D LTR MaLR 101 393 -112 301 143 0 0 chr2 105453162 105453218 -145234636 - L1MA10 LINE L1 -464 5827 5772 * 1617 204 13 87 chr2 105453211 105453515 -145234339 + L1MA10 LINE L1 5834 6082 -252 2269 48 45 10 chr2 105453515 105453804 -145234050 + AluY SINE Alu 1 299 -12 1617 204 13 87 chr2 105453804 105454038 -145233816 + L1MA10 LINE L1 6082 6332 -2 301 187 11 110 chr2 105454118 105454209 -145233645 + MLT1H LTR MaLR 42 123 -426 1528 251 73 32 chr2 105454876 105455469 -145232385 - MLT1G LTR MaLR 0 590 1 180 0 0 0 chr2 105455488 105455508 -145232346 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 3314 35 2 0 chr2 105455508 105455909 -145231945 - L1PA4 LINE L1 -13 6142 5741 2148 108 0 38 chr2 105456359 105456673 -145231181 + AluSq SINE Alu 1 302 -11 306 318 93 93 chr2 105456763 105457159 -145230695 - L2 LINE L2 -24 3248 2853 1774 156 104 0 chr2 105457603 105457929 -145229925 - MER46B DNA MER2_type 0 236 2 189 139 0 0 chr2 105458718 105458761 -145229093 + (A)n Simple_repeat Simple_repeat 1 43 0 763 223 83 73 chr2 105459047 105459429 -145228425 - MLT1A2 LTR MaLR -1 427 1 210 276 35 0 chr2 105462062 105462120 -145225734 + L2 LINE L2 3249 3308 -5 2250 77 23 23 chr2 105462667 105462966 -145224888 - AluSg SINE Alu -11 299 1 336 48 0 0 chr2 105463411 105463453 -145224401 + (TAGA)n Simple_repeat Simple_repeat 2 43 0 2185 92 0 20 chr2 105463617 105463922 -145223932 - AluY SINE Alu -12 299 1 236 351 0 0 chr2 105464418 105464532 -145223322 + G-rich Low_complexity Low_complexity 5 118 0 261 204 37 46 chr2 105464633 105464741 -145223113 - L1MC3 LINE L1 -883 6902 6796 333 309 127 39 chr2 105464839 105465302 -145222552 + LTR33 LTR ERVL 4 507 -14 1985 119 0 0 chr2 105465384 105465690 -145222164 + AluSc SINE Alu 1 306 0 494 196 28 22 chr2 105465739 105465918 -145221936 + GA-rich Low_complexity Low_complexity 1 180 0 218 283 129 78 chr2 105466478 105466690 -145221164 - MIR SINE MIR -14 248 20 198 291 95 57 chr2 105467534 105467692 -145220162 - MIR3 SINE MIR -21 187 24 198 278 19 111 chr2 105467750 105467858 -145219996 - L2 LINE L2 -1 3271 3174 582 330 25 8 chr2 105468258 105468497 -145219357 - MIR SINE MIR -14 248 6 290 25 0 25 chr2 105468819 105468859 -145218995 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 330 26 0 0 chr2 105470675 105470714 -145217140 + (TG)n Simple_repeat Simple_repeat 2 40 0 26 30 0 0 chr2 105470960 105470993 -145216861 + AT_rich Low_complexity Low_complexity 1 33 0 225 0 0 0 chr2 105472677 105472719 -145215135 + (GA)n Simple_repeat Simple_repeat 1 67 0 225 0 0 0 chr2 105472719 105472744 -145215110 + (GA)n Simple_repeat Simple_repeat 1 25 0 341 94 0 0 chr2 105480455 105480508 -145207346 - L1PA6 LINE L1 0 6154 6102 182 62 31 0 chr2 105483781 105483813 -145204041 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 356 235 25 0 chr2 105484742 105484823 -145203031 + MIR SINE MIR 1 83 -179 420 310 0 8 chr2 105484868 105484997 -145202857 - MIR SINE MIR -10 252 125 23 54 0 0 chr2 105485681 105485718 -145202136 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 105485833 105485854 -145202000 + AT_rich Low_complexity Low_complexity 1 21 0 310 317 93 38 chr2 105486006 105486189 -145201665 - MIR SINE MIR -64 198 6 828 177 28 17 chr2 105486268 105486449 -145201405 - MER53 DNA DNA -6 183 1 624 174 9 9 chr2 105487132 105487247 -145200607 - FLAM_C SINE Alu -15 118 4 26 0 0 0 chr2 105488030 105488056 -145199798 + AT_rich Low_complexity Low_complexity 1 26 0 5908 124 10 29 chr2 105488158 105488640 -145199214 - L1MA8 LINE L1 -5 6286 5796 2570 55 0 0 chr2 105488640 105488947 -145198907 - AluY SINE Alu -2 309 3 5908 124 10 29 chr2 105488947 105489616 -145198238 - L1MA8 LINE L1 -495 5796 5156 313 336 96 30 chr2 105489624 105489957 -145197897 - L2 LINE L2 -1067 2247 1893 344 314 67 0 chr2 105490487 105490592 -145197262 - L2 LINE L2 -50 3222 3111 291 316 85 62 chr2 105490647 105490667 -145197187 - L2 LINE L2 -983 2331 2313 2296 190 27 0 chr2 105490667 105491115 -145196739 + MER74C LTR ERVL 1 460 0 291 316 85 62 chr2 105491115 105491740 -145196114 - L2 LINE L2 -1001 2313 1671 1527 187 75 0 chr2 105491806 105492084 -145195770 + AluJo SINE Alu 1 299 -13 306 182 61 0 chr2 105492181 105492247 -145195607 - MER82 DNA MER2_type -2 651 582 1693 147 52 78 chr2 105492247 105492655 -145195199 - MER57A LTR ERV1 0 403 7 1573 234 92 5 chr2 105492659 105493082 -145194772 - MER82 DNA MER2_type -67 586 127 460 259 25 61 chr2 105493172 105493369 -145194485 - MIR SINE MIR -60 202 13 239 338 154 21 chr2 105493649 105493883 -145193971 - L2 LINE L2 -12 3260 2996 * 454 259 56 25 chr2 105493882 105494044 -145193810 + MIR SINE MIR 94 260 -2 813 194 0 0 chr2 105494326 105494465 -145193389 + FLAM_C SINE Alu 1 139 -4 249 119 0 0 chr2 105494637 105494679 -145193175 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 1733 160 32 7 chr2 105495146 105495427 -145192427 + AluJb SINE Alu 1 288 -24 1007 220 54 4 chr2 105497675 105497934 -145189920 + L1ME LINE L1 5276 5547 -617 223 399 27 7 chr2 105498391 105498539 -145189315 - L2 LINE L2 -534 2780 2630 388 275 76 22 chr2 105499140 105499499 -145188355 - LTR33A LTR ERVL -57 466 59 4147 111 60 81 chr2 105499690 105500492 -145187362 + LTR1 LTR ERV1 1 785 0 278 286 203 39 chr2 105501465 105501647 -145186207 - MIR SINE MIR -1 261 50 2054 219 39 22 chr2 105501677 105502215 -145185639 + MER70B LTR ERVL 32 578 0 2258 147 22 69 chr2 105502442 105502891 -145184963 + MSTA LTR MaLR 1 428 0 513 339 96 29 chr2 105503943 105504158 -145183696 - L2 LINE L2 -962 2352 2153 1273 164 110 41 chr2 105504158 105504388 -145183466 + MER44D DNA MER2_type 1 214 -2277 303 28 0 0 chr2 105504388 105504424 -145183430 + (TA)n Simple_repeat Simple_repeat 2 37 0 1273 164 110 41 chr2 105504424 105504510 -145183344 + MER44D DNA MER2_type 214 609 0 513 339 96 29 chr2 105504510 105504786 -145183068 - L2 LINE L2 -1161 2153 1828 2550 155 33 28 chr2 105507803 105507845 -145180009 - L1MB3 LINE L1 -7 6176 6136 2096 108 0 60 chr2 105507845 105508177 -145179677 - AluSq SINE Alu -1 312 1 2550 155 33 28 chr2 105508177 105508643 -145179211 - L1MB3 LINE L1 -47 6136 5665 2235 80 0 7 chr2 105508643 105508942 -145178912 - AluSx SINE Alu -7 305 9 22 0 0 0 chr2 105509126 105509148 -145178706 + AT_rich Low_complexity Low_complexity 1 22 0 1134 101 38 0 chr2 105509763 105509945 -145177909 + AluSc SINE Alu 116 303 0 201 220 43 163 chr2 105510581 105510790 -145177064 + L2 LINE L2 3002 3170 -143 1057 129 138 43 chr2 105510790 105511000 -145176854 + MER30 DNA MER1_type 1 230 0 201 220 43 163 chr2 105511000 105511072 -145176782 + L2 LINE L2 3170 3249 -64 345 292 10 10 chr2 105511676 105511772 -145176082 - L2 LINE L2 -6 3307 3212 207 0 0 0 chr2 105511982 105512005 -145175849 + (TG)n Simple_repeat Simple_repeat 2 24 0 244 277 15 0 chr2 105513373 105513438 -145174416 + (TA)n Simple_repeat Simple_repeat 2 67 0 1372 116 36 5 chr2 105513951 105514175 -145173679 - L1PA12 LINE L1 -17 6151 5921 245 286 59 17 chr2 105518953 105519072 -145168782 - MIR SINE MIR -50 212 89 346 277 23 8 chr2 105519460 105519590 -145168264 + MER117 DNA MER1_type 1 132 -65 346 260 106 88 chr2 105519676 105520064 -145167790 - MLT1H LTR MaLR -32 517 123 213 311 219 8 chr2 105520161 105520280 -145167574 + MIR3 SINE MIR 1 144 -64 195 358 0 15 chr2 105520435 105520502 -145167352 - L2 LINE L2 -92 3180 3115 23 0 0 0 chr2 105520781 105520804 -145167050 + AT_rich Low_complexity Low_complexity 1 23 0 257 312 89 25 chr2 105520930 105521087 -145166767 - L1ME LINE L1 -363 5758 5592 8714 97 8 16 chr2 105521092 105522017 -145165837 - HSMAR1 DNA Mariner -6 1281 367 2013 131 16 22 chr2 105522017 105522331 -145165523 - AluSx SINE Alu 0 312 1 8714 97 8 16 chr2 105522331 105522690 -145165164 - HSMAR1 DNA Mariner -920 367 7 623 272 0 30 chr2 105524189 105524358 -145163496 + MIR SINE MIR 1 164 -98 862 266 60 40 chr2 105524391 105524782 -145163072 + MLT1L LTR MaLR 42 358 -153 2306 97 19 10 chr2 105524927 105525235 -145162619 + AluSq SINE Alu 1 311 -2 2263 90 10 7 chr2 105525456 105525757 -145162097 + AluY SINE Alu 1 302 -9 619 103 0 0 chr2 105525772 105525859 -145161995 + AluSp/q SINE Alu 188 274 -39 380 216 108 50 chr2 105527008 105527147 -145160707 + MER5B DNA MER1_type 9 155 -23 3341 197 84 5 chr2 105528272 105529093 -145158761 - L1MD1 LINE L1 -3 6239 5354 4882 150 21 53 chr2 105529127 105530325 -145157529 - L1MA7 LINE L1 -4 6287 5126 475 218 48 0 chr2 105530309 105530456 -145157398 - L1MD1 LINE L1 -780 5366 5213 * 502 281 133 0 chr2 105530470 105530740 -145157114 - L1MD1 LINE L1 -978 5168 4863 2401 86 7 0 chr2 105530911 105531214 -145156640 - AluSp SINE Alu -8 305 1 264 306 102 13 chr2 105632366 105632523 -145055331 - MIR SINE MIR -48 214 44 983 263 24 14 chr2 105633147 105633444 -145054410 + L1MC4 LINE L1 5528 5827 -1981 453 294 128 38 chr2 105633684 105634357 -145053497 + L1MC4 LINE L1 6221 7066 -976 236 260 70 10 chr2 105634406 105634506 -145053348 + L1MC5 LINE L1 6957 7062 -899 621 266 85 15 chr2 105634734 105635017 -145052837 + MLT1H LTR MaLR 17 285 -305 233 238 60 0 chr2 105635623 105635712 -145052142 + MIR3 SINE MIR 102 197 -11 321 26 0 0 chr2 105635734 105635772 -145052082 + (CACCC)n Simple_repeat Simple_repeat 3 40 0 940 167 14 0 chr2 105636918 105637100 -145050754 + FRAM SINE Alu 1 183 0 602 183 91 74 chr2 105638672 105638847 -145049007 - MER45A DNA AcHobo 0 178 1 748 287 99 7 chr2 105639867 105640170 -145047684 + L1MC2 LINE L1 5272 5602 -2206 204 220 40 0 chr2 105640384 105640434 -145047420 - MIR SINE MIR -98 164 113 2029 125 7 3 chr2 105640454 105640750 -145047104 - AluSq SINE Alu -16 297 1 184 329 199 37 chr2 105640794 105640955 -145046899 - MIR SINE MIR -56 206 20 1125 202 44 4 chr2 105641403 105641651 -145046203 + ORSL DNA AcHobo 13 270 -5 554 129 69 43 chr2 105642057 105642173 -145045681 + MLT1A2 LTR MaLR 256 374 0 1654 174 0 39 chr2 105642402 105642713 -145045141 - AluJo SINE Alu -13 299 1 21 57 0 0 chr2 105643377 105643412 -145044442 + AT_rich Low_complexity Low_complexity 1 35 0 245 211 0 0 chr2 105643648 105643700 -145044154 + L2 LINE L2 3137 3188 -84 287 159 14 72 chr2 105648463 105648532 -145039322 + MLT1B LTR MaLR 112 176 -198 858 212 67 0 chr2 105648563 105648756 -145039098 + MLT1B LTR MaLR 181 386 -4 1058 211 49 12 chr2 105648984 105649231 -145038623 + L1MC2 LINE L1 6081 6336 -8 692 188 0 31 chr2 105649963 105650091 -145037763 + FLAM_C SINE Alu 7 130 -13 219 36 0 0 chr2 105650211 105650239 -145037615 + (GA)n Simple_repeat Simple_repeat 1 28 0 2751 133 70 0 chr2 105650549 105651017 -145036837 - L1MB3 LINE L1 -1 6182 5682 384 288 45 8 chr2 105651019 105651151 -145036703 - MIR SINE MIR -102 160 24 1650 158 0 53 chr2 105651557 105651861 -145035993 - AluJo SINE Alu -22 290 3 763 237 67 62 chr2 105652057 105652492 -145035362 - L1MC5 LINE L1 -187 7774 7338 1988 124 4 0 chr2 105652563 105652836 -145035018 - AluSx SINE Alu -6 306 33 232 356 0 0 chr2 105652837 105652927 -145034927 - L1MC4a LINE L1 -421 7387 7298 6341 213 16 18 chr2 105653643 105654177 -145033677 - L1 LINE L1 -813 5333 4799 360 0 0 0 chr2 105654177 105654217 -145033637 + (TTA)n Simple_repeat Simple_repeat 2 41 0 6341 213 16 18 chr2 105654217 105655159 -145032695 - L1 LINE L1 -1347 4799 3860 180 0 0 0 chr2 105655393 105655413 -145032441 + (T)n Simple_repeat Simple_repeat 1 20 0 26 50 0 0 chr2 105656229 105656269 -145031585 + AT_rich Low_complexity Low_complexity 1 40 0 2219 116 10 0 chr2 105657218 105657528 -145030326 + AluSq SINE Alu 1 313 0 267 272 69 44 chr2 105661390 105661542 -145026312 - MLT1J1 LTR MaLR -289 161 5 2295 104 0 0 chr2 105661574 105661872 -145025982 + AluSx SINE Alu 1 298 -14 2532 214 35 37 chr2 105662361 105662718 -145025136 + L1MB2 LINE L1 4859 5215 -956 2044 96 14 7 chr2 105662718 105663052 -145024802 + AluY SINE Alu 1 311 0 2532 214 35 37 chr2 105663052 105663824 -145024030 + L1MB2 LINE L1 5215 5985 -186 282 29 0 0 chr2 105663994 105664029 -145023825 + (GA)n Simple_repeat Simple_repeat 2 36 0 862 203 0 6 chr2 105664042 105664205 -145023649 - MLT1A2 LTR MaLR -212 162 1 275 204 125 23 chr2 105664327 105664415 -145023439 - MLT1I LTR MaLR -25 384 288 447 261 23 23 chr2 105664626 105664756 -145023098 - MLT1H LTR MaLR -330 219 90 184 300 40 0 chr2 105665702 105665752 -145022102 + MER5A DNA MER1_type 69 120 -69 198 333 81 18 chr2 105666072 105666183 -145021671 + L2 LINE L2 3145 3262 -10 232 170 85 0 chr2 105666422 105666469 -145021385 - LTR50 LTR ERVL 0 795 745 324 0 0 0 chr2 105667900 105667936 -145019918 + (TG)n Simple_repeat Simple_repeat 2 37 0 316 342 48 16 chr2 105667949 105668136 -145019718 + L3b LINE CR1 1261 1453 -130 207 294 164 23 chr2 105668276 105668453 -145019401 + MIR SINE MIR 61 262 0 1600 147 20 0 chr2 105668523 105668775 -145019079 + AluSg SINE Alu 42 298 -12 590 129 0 20 chr2 105669454 105669555 -145018299 + AluSg/x SINE Alu 211 309 0 1909 116 10 23 chr2 105669555 105669865 -145017989 + L1MA4 LINE L1 5901 6206 -94 999 295 99 62 chr2 105671363 105671959 -145015895 + HERVL LTR ERVL 3588 4205 -1449 625 317 55 25 chr2 105671974 105672574 -145015280 + HERVL LTR ERVL 4312 4982 -782 295 272 61 0 chr2 105672755 105672869 -145014985 + LTR67 LTR ERVL 420 540 -17 347 219 35 35 chr2 105672884 105672998 -145014856 + L1ME LINE L1 5566 5679 -442 2595 112 3 6 chr2 105674159 105674524 -145013330 + THE1B LTR MaLR 1 364 0 199 204 0 20 chr2 105674904 105674953 -145012901 - L2 LINE L2 -338 2976 2929 286 301 130 0 chr2 105675052 105675175 -145012679 - MIR SINE MIR -32 230 92 291 222 148 0 chr2 105675983 105676064 -145011790 + MER94 DNA DNA 1 93 -41 2379 65 0 0 chr2 105676119 105676398 -145011456 + AluY SINE Alu 16 294 -17 1712 243 89 22 chr2 105676738 105677244 -145010610 - MLT1F LTR MaLR -2 540 1 25 0 0 0 chr2 105677289 105677314 -145010540 + AT_rich Low_complexity Low_complexity 1 25 0 272 290 131 35 chr2 105677438 105677583 -145010271 + L2 LINE L2 3155 3313 0 198 103 0 0 chr2 105680381 105680410 -145007444 + (CACCAT)n Simple_repeat Simple_repeat 5 33 0 590 227 37 6 chr2 105680890 105681053 -145006801 + MLT1A2 LTR MaLR 2 169 -205 674 130 10 0 chr2 105681193 105681293 -145006561 + AluY SINE Alu 204 304 -7 659 298 6 0 chr2 105681596 105681754 -145006100 - MIR SINE MIR -96 166 8 1834 160 3 17 chr2 105682493 105682787 -145005067 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr2 105682787 105682809 -145005045 + AT_rich Low_complexity Low_complexity 1 22 0 243 192 0 0 chr2 105682855 105682933 -145004921 + (CA)n Simple_repeat Simple_repeat 2 79 0 245 254 0 0 chr2 105683212 105683271 -145004583 - MLT1J2 LTR MaLR -287 163 105 254 208 19 0 chr2 105685180 105685233 -145002621 - MIR SINE MIR -61 147 94 666 218 16 62 chr2 105687138 105687331 -145000523 + MLT1J LTR MaLR 127 310 -201 355 301 0 0 chr2 105687473 105687566 -145000288 + MLT1J LTR MaLR 409 501 -10 431 264 70 23 chr2 105689386 105689515 -144998339 + L2 LINE L2 3138 3272 0 197 261 84 34 chr2 105689795 105689914 -144997940 + MIR SINE MIR 91 215 -47 2127 113 0 60 chr2 105690326 105690645 -144997209 - AluSx SINE Alu -12 300 1 417 197 0 0 chr2 105690745 105690816 -144997038 + L2 LINE L2 3237 3307 -6 340 288 194 0 chr2 105691145 105691305 -144996549 - MIR SINE MIR -48 214 24 202 154 26 0 chr2 105691330 105691369 -144996485 + (TAA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr2 105691802 105691823 -144996031 + AT_rich Low_complexity Low_complexity 1 21 0 2142 98 24 0 chr2 105692141 105692428 -144995426 + AluSg SINE Alu 1 294 -16 6475 80 23 6 chr2 105692509 105693407 -144994447 - L1MA2 LINE L1 0 6304 5391 2803 157 35 14 chr2 105693508 105693685 -144994169 - L1 LINE L1 -1587 5978 5806 2286 101 0 3 chr2 105693685 105693991 -144993863 - AluSg SINE Alu -5 305 1 2803 157 35 14 chr2 105693991 105694323 -144993531 - L1 LINE L1 -1759 5806 5458 * 6464 162 25 21 chr2 105694290 105695622 -144992232 - L1 LINE L1 -2632 4933 3568 2186 107 7 3 chr2 105695622 105695921 -144991933 - AluSq SINE Alu -13 300 1 6464 162 25 21 chr2 105695921 105696927 -144990927 - L1 LINE L1 -3997 3568 2568 10054 181 28 7 chr2 105697032 105698791 -144989063 - L1 LINE L1 -5748 1817 22 259 335 134 10 chr2 105699181 105699392 -144988462 - L2 LINE L2 -219 3053 2826 206 313 149 22 chr2 105699405 105699539 -144988315 - L2 LINE L2 0 3272 3122 2459 131 25 8 chr2 105699811 105700169 -144987685 + THE1B LTR MaLR 1 364 0 1755 100 0 3 chr2 105700169 105700460 -144987394 + THE1B-int LTR MaLR 1 364 0 396 325 44 20 chr2 105700542 105700655 -144987199 - MIR SINE MIR -37 225 103 2491 50 3 3 chr2 105700655 105700953 -144986901 + L1PA5 LINE L1 5853 6150 -4 396 325 44 20 chr2 105700953 105701042 -144986812 - MIR SINE MIR -159 103 18 419 360 81 20 chr2 105701239 105701583 -144986271 + L1ME4a LINE L1 4767 5131 -1015 387 284 14 83 chr2 105701701 105701919 -144985935 + ERVL LTR ERVL 1664 1866 -3898 * 502 283 54 54 chr2 105701907 105702054 -144985800 + ERVL LTR ERVL 1775 1921 -3733 2127 121 0 0 chr2 105702054 105702335 -144985519 + AluSx SINE Alu 1 281 -31 216 0 0 0 chr2 105702339 105702363 -144985491 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 502 283 54 54 chr2 105702363 105702450 -144985404 + ERVL LTR ERVL 1923 2014 -3640 1284 311 84 16 chr2 105702476 105703045 -144984809 + ERVL LTR ERVL 2120 2727 -3037 234 0 0 0 chr2 105704804 105704830 -144983024 + (A)n Simple_repeat Simple_repeat 1 26 0 225 296 0 14 chr2 105706562 105706633 -144981221 + GA-rich Low_complexity Low_complexity 3 72 0 2023 133 0 3 chr2 105706876 105707170 -144980684 - AluJo SINE Alu -11 301 9 229 216 0 0 chr2 105708580 105708631 -144979223 + (TA)n Simple_repeat Simple_repeat 2 52 0 32 17 0 52 chr2 105708704 105708727 -144979127 + AT_rich Low_complexity Low_complexity 1 24 -31 1569 179 10 21 chr2 105708727 105709017 -144978837 + AluJb SINE Alu 1 287 -25 32 17 0 52 chr2 105709017 105709051 -144978803 + AT_rich Low_complexity Low_complexity 24 55 0 749 285 147 21 chr2 105710472 105710988 -144976866 + MER45C DNA AcHobo 20 600 -353 313 163 0 0 chr2 105711005 105711054 -144976800 + MER45C DNA AcHobo 900 948 -5 234 316 196 18 chr2 105711071 105711454 -144976400 - L2 LINE L2 -1532 1782 1332 181 186 0 85 chr2 105711552 105711611 -144976243 + L2 LINE L2 3158 3211 -102 1642 277 16 12 chr2 105712757 105713252 -144974602 + L1ME4a LINE L1 5487 5983 -138 454 321 51 5 chr2 105713262 105713458 -144974396 - MIR SINE MIR -17 245 41 256 143 156 26 chr2 105713491 105713568 -144974286 + L1ME4a LINE L1 6027 6113 -8 22 70 0 0 chr2 105714731 105714774 -144973080 + AT_rich Low_complexity Low_complexity 1 43 0 1832 149 69 66 chr2 105714880 105714948 -144972906 - MLT1A1 LTR MaLR 0 365 299 2139 122 26 0 chr2 105714948 105715251 -144972603 + AluSx SINE Alu 1 311 -1 1832 149 69 66 chr2 105715251 105715544 -144972310 - MLT1A1 LTR MaLR -66 299 3 211 345 28 57 chr2 105716018 105716195 -144971659 + L2 LINE L2 3134 3305 -8 192 77 0 0 chr2 105718629 105718655 -144969199 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 1267 193 53 0 chr2 105720235 105720478 -144967376 + L1MB2 LINE L1 5908 6163 -8 262 280 178 0 chr2 105720943 105721050 -144966804 - L2 LINE L2 0 3313 3188 1880 97 73 0 chr2 105721157 105721416 -144966438 + AluSg SINE Alu 1 278 -32 277 151 0 0 chr2 105721930 105721983 -144965871 + Charlie7 DNA MER1_type 53 105 -2507 264 245 49 10 chr2 105721979 105722081 -144965773 + Charlie7 DNA MER1_type 2443 2548 -64 * 293 291 0 0 chr2 105722233 105722312 -144965542 + Charlie7 DNA MER1_type 2532 2610 -2 306 394 0 0 chr2 105722828 105722955 -144964899 + (CA)n Simple_repeat Simple_repeat 1 127 0 2310 101 0 0 chr2 105723071 105723368 -144964486 + AluSx SINE Alu 1 297 -15 303 224 40 13 chr2 105723560 105723636 -144964218 - L1ME LINE L1 -371 5795 5718 332 311 73 36 chr2 105723647 105723895 -144963959 - L1ME LINE L1 -448 5673 5417 888 209 11 28 chr2 105724681 105724863 -144962991 - MER58A DNA MER1_type 0 224 46 1515 146 74 128 chr2 105724871 105725276 -144962578 + L1MB5 LINE L1 5792 6174 0 506 295 36 26 chr2 105725520 105725713 -144962141 - MLT1J2 LTR MaLR 0 450 256 447 223 11 0 chr2 105725764 105725858 -144961996 - MER5A DNA MER1_type -86 103 9 270 272 69 44 chr2 105725947 105726099 -144961755 - MLT1J1 LTR MaLR -289 161 5 2280 107 0 0 chr2 105726131 105726429 -144961425 + AluSx SINE Alu 1 298 -14 5131 146 43 22 chr2 105726918 105727275 -144960579 + L1MB2 LINE L1 4859 5207 -964 2410 77 0 3 chr2 105727275 105727599 -144960255 + AluY SINE Alu 1 311 0 5131 146 43 22 chr2 105727599 105728532 -144959322 + L1MB2 LINE L1 5207 6171 0 1832 175 26 0 chr2 105728539 105728842 -144959012 + AluJo SINE Alu 1 311 -1 521 247 23 23 chr2 105729187 105729361 -144958493 + MER5B DNA MER1_type 5 178 0 279 217 0 72 chr2 105729372 105729441 -144958413 + MER69 DNA AcHobo 3 66 -111 503 239 35 0 chr2 105729567 105729709 -144958145 + MER69 DNA AcHobo 2380 2526 0 392 228 11 0 chr2 105730304 105730396 -144957458 - MER5B DNA MER1_type -85 93 1 403 220 206 0 chr2 105730463 105730604 -144957250 - MER5B DNA MER1_type 0 178 9 202 114 29 0 chr2 105730845 105730880 -144956974 + GA-rich Low_complexity Low_complexity 1 36 0 330 222 231 8 chr2 105731714 105731831 -144956023 + MER5A DNA MER1_type 42 184 -5 316 337 20 0 chr2 105731953 105732051 -144955803 - MIR3 SINE MIR -19 189 90 2063 128 14 0 chr2 105732327 105732660 -144955194 - AluSx SINE Alu 0 312 1 321 26 0 0 chr2 105733539 105733577 -144954277 + (GA)n Simple_repeat Simple_repeat 2 39 0 643 265 6 0 chr2 105734485 105734647 -144953207 + MER5A DNA MER1_type 8 170 -19 367 266 44 0 chr2 105735166 105735279 -144952575 + MLT1I LTR MaLR 280 397 -12 210 240 0 20 chr2 105735811 105735861 -144951993 + CT-rich Low_complexity Low_complexity 3 51 0 221 298 0 0 chr2 105737231 105737288 -144950566 + GA-rich Low_complexity Low_complexity 1 57 0 198 71 0 0 chr2 105737477 105737505 -144950349 + (A)n Simple_repeat Simple_repeat 1 28 0 59 65 0 0 chr2 105737760 105737868 -144949986 + AT_rich Low_complexity Low_complexity 1 108 0 904 279 55 32 chr2 105738525 105738905 -144948949 + L2 LINE L2 2924 3312 -1 2278 126 3 0 chr2 105739056 105739366 -144948488 - AluSx SINE Alu -1 311 1 371 221 194 78 chr2 105739542 105739759 -144948095 - MLT1J LTR MaLR -269 242 1 307 320 47 7 chr2 105740167 105740317 -144947537 + MIR SINE MIR 57 212 -50 1760 164 0 33 chr2 105740339 105740643 -144947211 + AluJo SINE Alu 1 294 -18 192 77 0 0 chr2 105741519 105741545 -144946309 + (T)n Simple_repeat Simple_repeat 1 26 0 373 262 33 0 chr2 105742866 105742988 -144944866 - LTR33 LTR ERVL 0 521 396 272 344 83 19 chr2 105744012 105744169 -144943685 + L2 LINE L2 3146 3312 -1 2123 124 7 3 chr2 105745955 105746254 -144941600 - AluSq SINE Alu -11 302 3 275 281 94 64 chr2 105747263 105747434 -144940420 - MIR SINE MIR -12 250 75 268 182 91 0 chr2 105749126 105749192 -144938662 + MIR SINE MIR 113 184 -78 203 0 37 0 chr2 105749701 105749728 -144938126 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 440 306 92 46 chr2 105749750 105750034 -144937820 + L3 LINE CR1 1023 1325 -252 2211 111 0 0 chr2 105750034 105750323 -144937531 + AluSx SINE Alu 19 307 -5 440 306 92 46 chr2 105750323 105750365 -144937489 + L3 LINE CR1 1325 1364 -213 1741 197 98 40 chr2 105750906 105751383 -144936471 - MLT1D LTR MaLR 0 505 1 2437 125 24 8 chr2 105752320 105752689 -144935165 + THE1C LTR MaLR 1 375 0 251 296 127 0 chr2 105753536 105753657 -144934197 + MIR SINE MIR 18 153 -62 1140 202 32 9 chr2 105754159 105754377 -144933477 - MER58A DNA MER1_type 0 224 2 217 328 74 25 chr2 105755642 105755764 -144932090 - L2 LINE L2 -20 3252 3125 1810 209 43 0 chr2 105756015 105756365 -144931489 + MLT1A1 LTR MaLR 1 365 0 25 0 0 0 chr2 105756633 105756658 -144931196 + AT_rich Low_complexity Low_complexity 1 25 0 802 286 14 3 chr2 105757073 105757360 -144930494 + L1ME3A LINE L1 3619 3908 -2238 1998 249 78 67 chr2 105757372 105757675 -144930179 + L1ME3A LINE L1 4853 5151 -1019 1852 165 0 37 chr2 105757675 105757996 -144929858 + AluJb SINE Alu 1 309 -3 1998 249 78 67 chr2 105757996 105758581 -144929273 + L1ME3A LINE L1 5151 5750 -420 1892 113 26 71 chr2 105758581 105758890 -144928964 + AluJb SINE Alu 3 297 -15 1998 249 78 67 chr2 105758890 105759288 -144928566 + L1ME3A LINE L1 5750 6142 -28 240 86 0 0 chr2 105760685 105760720 -144927134 + (A)n Simple_repeat Simple_repeat 1 35 0 359 278 126 31 chr2 105761653 105761844 -144926010 - MIR SINE MIR -6 256 48 284 301 114 0 chr2 105763411 105763534 -144924320 + L2 LINE L2 3099 3235 -37 432 110 22 11 chr2 105765321 105765412 -144922442 + (CCG)n Simple_repeat Simple_repeat 3 94 0 37 0 0 0 chr2 105766339 105766376 -144921478 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 105767389 105767410 -144920444 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 105769036 105769065 -144918789 + (T)n Simple_repeat Simple_repeat 1 29 0 38 39 0 0 chr2 105769271 105769323 -144918531 + AT_rich Low_complexity Low_complexity 1 52 0 291 114 0 0 chr2 105769992 105770036 -144917818 + (TTG)n Simple_repeat Simple_repeat 1 44 0 432 0 0 0 chr2 105771441 105771489 -144916365 + (TTA)n Simple_repeat Simple_repeat 2 49 0 2314 119 0 0 chr2 105772354 105772657 -144915197 - AluSx SINE Alu -9 303 1 208 194 51 31 chr2 105773177 105773220 -144914634 + (TA)n Simple_repeat Simple_repeat 2 43 -58 2306 97 3 13 chr2 105773220 105773529 -144914325 + AluSx SINE Alu 1 306 -6 208 194 51 31 chr2 105773529 105773583 -144914271 + (TA)n Simple_repeat Simple_repeat 43 101 0 423 306 79 31 chr2 105774309 105774663 -144913191 + L1ME4a LINE L1 5327 5699 -422 299 288 114 8 chr2 105774737 105775001 -144912853 + L1ME4a LINE L1 5830 6121 0 299 256 37 0 chr2 105775074 105775156 -144912698 - L2 LINE L2 0 3313 3229 417 271 53 62 chr2 105777104 105777329 -144910525 + MIR SINE MIR 37 259 -3 22 0 0 0 chr2 105777974 105777996 -144909858 + AT_rich Low_complexity Low_complexity 1 22 0 2057 110 0 28 chr2 105779135 105779453 -144908401 + AluSg SINE Alu 2 310 0 270 116 0 0 chr2 105779653 105779696 -144908158 + (ATGGTG)n Simple_repeat Simple_repeat 1 43 0 1302 78 0 0 chr2 105779738 105779918 -144907936 + (TGG)n Simple_repeat Simple_repeat 1 180 0 687 215 0 0 chr2 105779945 105780117 -144907737 + (ATGGTG)n Simple_repeat Simple_repeat 5 176 0 1295 251 33 21 chr2 105780626 105780960 -144906894 + MLT1I LTR MaLR 72 409 0 279 236 146 27 chr2 105782042 105782152 -144905702 - MIR SINE MIR -77 185 63 1893 127 3 41 chr2 105782682 105782998 -144904856 + AluSg SINE Alu 1 304 -6 2377 70 0 6 chr2 105784566 105784878 -144902976 + AluY SINE Alu 1 310 -1 2003 123 27 0 chr2 105785749 105786050 -144901804 + AluSc SINE Alu 1 309 0 2113 113 7 0 chr2 105786078 105786378 -144901476 - AluSx SINE Alu -10 302 1 434 242 38 23 chr2 105788815 105788947 -144898907 - MIR3 SINE MIR -9 199 66 198 103 0 0 chr2 105789423 105789452 -144898402 + (T)n Simple_repeat Simple_repeat 1 29 0 377 268 109 48 chr2 105790694 105790933 -144896921 + MIR SINE MIR 17 262 0 180 125 0 0 chr2 105792298 105792330 -144895524 + (T)n Simple_repeat Simple_repeat 1 32 0 22 56 0 0 chr2 105793267 105793303 -144894551 + AT_rich Low_complexity Low_complexity 1 36 0 270 165 24 35 chr2 105794571 105794656 -144893198 + GA-rich Low_complexity Low_complexity 1 84 0 214 182 45 57 chr2 105796419 105796507 -144891347 + (TATATG)n Simple_repeat Simple_repeat 2 88 0 204 40 0 0 chr2 105798030 105798055 -144889799 + (CCCTG)n Simple_repeat Simple_repeat 5 29 0 23 33 0 0 chr2 105798584 105798614 -144889240 + GC_rich Low_complexity Low_complexity 1 30 0 183 167 0 0 chr2 105800268 105800310 -144887544 + (CATG)n Simple_repeat Simple_repeat 3 44 0 25 31 0 0 chr2 105802076 105802108 -144885746 + AT_rich Low_complexity Low_complexity 1 32 0 297 0 0 0 chr2 105802441 105802474 -144885380 + (CAT)n Simple_repeat Simple_repeat 2 34 0 216 0 0 0 chr2 105808136 105808160 -144879694 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 333 0 0 0 chr2 105808350 105808387 -144879467 + (CA)n Simple_repeat Simple_repeat 1 37 0 234 91 55 18 chr2 105808609 105808664 -144879190 + GA-rich Low_complexity Low_complexity 2 58 0 217 291 0 24 chr2 105809076 105809153 -144878701 + CT-rich Low_complexity Low_complexity 1 75 0 237 263 0 0 chr2 105809224 105809281 -144878573 + G-rich Low_complexity Low_complexity 1 57 0 294 164 0 0 chr2 105809566 105809621 -144878233 + GA-rich Low_complexity Low_complexity 1 55 0 207 0 0 0 chr2 105810224 105810247 -144877607 + (GGAGA)n Simple_repeat Simple_repeat 4 26 0 186 71 0 0 chr2 105810581 105810609 -144877245 + (CTG)n Simple_repeat Simple_repeat 1 28 0 422 148 8 23 chr2 105810665 105810793 -144877061 + G-rich Low_complexity Low_complexity 1 126 0 274 145 40 40 chr2 105810795 105810871 -144876983 + (CGG)n Simple_repeat Simple_repeat 3 78 0 255 31 0 0 chr2 105818875 105818907 -144868947 + (CA)n Simple_repeat Simple_repeat 2 33 0 4221 160 12 18 chr2 105821627 105822388 -144865466 - L1MB3 LINE L1 -2 6181 5426 2133 95 0 3 chr2 105822504 105822833 -144865021 - AluSx SINE Alu 0 328 1 2340 84 3 0 chr2 105824463 105824771 -144863083 - AluSc SINE Alu 0 309 1 318 104 62 42 chr2 105825664 105825929 -144861925 + (CA)n Simple_repeat Simple_repeat 1 270 0 217 174 58 29 chr2 105825961 105826030 -144861824 + (CA)n Simple_repeat Simple_repeat 2 72 0 352 78 0 0 chr2 105827911 105827962 -144859892 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1417 203 16 38 chr2 105827962 105828277 -144859577 - AluJo SINE Alu 0 312 5 293 149 15 0 chr2 105828325 105828392 -144859462 + CT-rich Low_complexity Low_complexity 2 69 0 2281 101 0 16 chr2 105829059 105829366 -144858488 - AluSx SINE Alu -9 303 2 185 0 0 39 chr2 105830192 105830218 -144857636 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 4270 123 16 0 chr2 105832103 105832603 -144855251 + MER41B LTR ERV1 1 514 -121 2284 113 3 0 chr2 105832603 105832912 -144854942 - AluSq SINE Alu -3 310 1 4270 123 16 0 chr2 105832912 105833036 -144854818 + MER41B LTR ERV1 514 635 0 1568 210 40 15 chr2 105833036 105833324 -144854530 + MER7A DNA MER2_type 1 297 -2741 4062 88 12 42 chr2 105833324 105833441 -144854413 - MER41A LTR ERV1 0 554 435 2127 119 10 13 chr2 105833441 105833752 -144854102 + AluSp SINE Alu 1 310 -3 4062 88 12 42 chr2 105833752 105834205 -144853649 - MER41A LTR ERV1 -119 435 1 1568 210 40 15 chr2 105834205 105834240 -144853614 + MER7A DNA MER2_type 297 330 -16 267 272 53 65 chr2 105835901 105835991 -144851863 - MIR SINE MIR -19 243 154 1855 162 24 12 chr2 105835991 105836330 -144851524 - MER61A LTR ERV1 0 343 1 267 272 53 65 chr2 105836330 105836408 -144851446 - MIR SINE MIR -108 154 77 1680 143 34 5 chr2 105836918 105837216 -144850638 + MER61B LTR ERV1 2 396 -29 487 280 59 38 chr2 105837752 105837991 -144849863 + MIR SINE MIR 13 256 -6 30 59 0 0 chr2 105838145 105838196 -144849658 + AT_rich Low_complexity Low_complexity 1 51 0 1159 130 0 0 chr2 105839260 105839452 -144848402 - AluJb SINE Alu 0 321 130 260 213 125 0 chr2 105839452 105839532 -144848322 + L1MC4 LINE L1 6614 6703 -1339 514 194 0 57 chr2 105839554 105839678 -144848176 - FLAM_C SINE Alu -16 117 1 2404 85 0 3 chr2 105840415 105840720 -144847134 + AluSq SINE Alu 1 304 -9 262 303 33 16 chr2 105840846 105840968 -144846886 + MIR SINE MIR 22 145 -117 309 26 0 0 chr2 105841874 105841912 -144845942 + (TG)n Simple_repeat Simple_repeat 2 39 0 201 315 18 27 chr2 105843994 105844105 -144843749 - MIR SINE MIR -62 146 37 1413 202 33 44 chr2 105844801 105845162 -144842692 + MLT1A1 LTR MaLR 7 363 -2 221 230 14 0 chr2 105848883 105848957 -144838897 + CT-rich Low_complexity Low_complexity 1 75 0 1920 209 58 9 chr2 105852319 105852764 -144835090 - MLT1C LTR MaLR 0 467 1 296 285 97 65 chr2 105853153 105853598 -144834256 - L1M4 LINE L1 -1310 4836 4378 220 307 41 103 chr2 105853917 105854334 -144833520 + L2 LINE L2 2877 3267 -46 354 289 60 92 chr2 105854491 105855048 -144832806 - L1P LINE L1 -1902 4244 3712 225 214 0 0 chr2 105855738 105855780 -144832074 + T-rich Low_complexity Low_complexity 1 42 0 375 294 52 82 chr2 105857266 105857460 -144830394 + MIR SINE MIR 70 257 -5 1252 192 64 64 chr2 105857581 105857925 -144829929 - MER2 DNA MER2_type 0 344 1 2158 96 20 23 chr2 105857947 105858250 -144829604 + AluSx SINE Alu 1 302 -10 260 89 0 22 chr2 105858629 105858674 -144829180 + (GA)n Simple_repeat Simple_repeat 1 44 0 25 0 0 0 chr2 105858730 105858755 -144829099 + AT_rich Low_complexity Low_complexity 1 25 0 237 323 0 0 chr2 105859017 105859079 -144828775 + L2 LINE L2 3210 3271 -1 268 163 0 130 chr2 105860506 105860598 -144827256 - L1ME3A LINE L1 0 6170 6091 243 313 25 0 chr2 105863063 105863143 -144824711 - L2 LINE L2 -2 3270 3189 709 248 92 50 chr2 105863143 105863596 -144824258 - MLT1F LTR MaLR 0 593 3 2541 172 40 46 chr2 105863618 105864136 -144823718 + MLT2B2 LTR ERVL 1 515 0 426 269 19 0 chr2 105864762 105864866 -144822988 - MLT1J LTR MaLR -350 161 56 2571 162 40 2 chr2 105865163 105865613 -144822241 + MLT1C LTR MaLR 1 467 0 1807 165 28 3 chr2 105865696 105865987 -144821867 - AluSp SINE Alu -15 298 1 302 239 23 15 chr2 105866548 105866678 -144821176 + CT-rich Low_complexity Low_complexity 2 132 0 270 56 0 0 chr2 105866805 105866841 -144821013 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 2169 116 0 0 chr2 105866845 105867130 -144820724 - AluSx SINE Alu -27 285 1 630 312 146 13 chr2 105867595 105867980 -144819874 - MLT1J LTR MaLR -65 446 11 10720 160 136 22 chr2 105868110 105868531 -144819323 + L1M4c LINE L1 18 389 -5993 2111 133 0 3 chr2 105868531 105868825 -144819029 + AluSg SINE Alu 1 293 -17 10720 160 136 22 chr2 105868825 105870695 -144817159 + L1M4c LINE L1 389 2572 -3810 1640 165 24 0 chr2 105870695 105870986 -144816868 + L1MB3 LINE L1 5879 6176 -7 240 192 27 27 chr2 105870997 105871070 -144816784 + MER94 DNA DNA 59 131 -3 223 341 62 16 chr2 105871086 105871215 -144816639 - L2 LINE L2 -527 2787 2653 1546 182 67 48 chr2 105872692 105872848 -144815006 - MLT1A1 LTR MaLR 0 365 214 7020 59 10 9 chr2 105872848 105873917 -144813937 + L1PA7 LINE L1 5070 6139 -15 1546 182 67 48 chr2 105873917 105874118 -144813736 - MLT1A1 LTR MaLR -151 214 1 1481 216 33 7 chr2 105874288 105874589 -144813265 + AluJo SINE Alu 1 309 -3 255 196 0 0 chr2 105874754 105874805 -144813049 - MIR SINE MIR -131 131 81 1878 46 5 0 chr2 105875562 105875781 -144812073 - AluY SINE Alu 0 311 92 1818 139 3 28 chr2 105875781 105876067 -144811787 - AluSx SINE Alu -31 281 1 704 159 130 0 chr2 105880760 105880898 -144806956 + FRAM SINE Alu 1 153 -23 25 0 0 0 chr2 105880904 105880929 -144806925 + AT_rich Low_complexity Low_complexity 1 25 0 29 28 0 0 chr2 105884268 105884304 -144803550 + AT_rich Low_complexity Low_complexity 1 36 0 1520 181 14 4 chr2 105885754 105886035 -144801819 - AluJo SINE Alu -24 288 5 2163 85 35 0 chr2 105888034 105888316 -144799538 - AluSp SINE Alu -19 294 3 302 239 23 15 chr2 105888879 105889009 -144798845 + CT-rich Low_complexity Low_complexity 2 132 0 270 56 0 0 chr2 105889136 105889172 -144798682 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 2147 116 0 0 chr2 105889176 105889461 -144798393 - AluSx SINE Alu -27 285 1 401 292 162 0 chr2 105889687 105889841 -144798013 - L2 LINE L2 -1035 2279 2101 617 112 0 20 chr2 105889876 105889974 -144797880 - L1MC1 LINE L1 -165 6168 6073 26 0 0 0 chr2 105889974 105890000 -144797854 + AT_rich Low_complexity Low_complexity 1 26 0 1030 128 62 93 chr2 105890008 105890094 -144797760 - L1MB1 LINE L1 0 6168 6081 2147 128 3 0 chr2 105890094 105890399 -144797455 + AluSx SINE Alu 1 306 -6 1030 128 62 93 chr2 105890399 105890570 -144797284 - L1MB1 LINE L1 -87 6081 5919 * 1713 152 37 7 chr2 105890546 105890843 -144797011 + L1M3 LINE L1 5470 5775 -393 15158 125 40 13 chr2 105890843 105892344 -144795510 + Tigger1 DNA MER2_type 6 1596 -822 1073 84 14 0 chr2 105892344 105892487 -144795367 + L1PA13 LINE L1 6000 6144 -19 15158 125 40 13 chr2 105892487 105893331 -144794523 + Tigger1 DNA MER2_type 1596 2415 -3 237 65 0 0 chr2 105893332 105893363 -144794491 + (TG)n Simple_repeat Simple_repeat 2 32 0 333 188 62 0 chr2 105893397 105893461 -144794393 - MLT1A2 LTR MaLR 0 374 307 757 137 0 0 chr2 105893561 105893663 -144794191 - AluSq/x SINE Alu -209 104 3 4127 176 7 2 chr2 105893664 105894433 -144793421 - L1MEc LINE L1 -3266 2880 2146 23 0 0 0 chr2 105894764 105894787 -144793067 + AT_rich Low_complexity Low_complexity 1 23 0 498 267 47 33 chr2 105896048 105896198 -144791656 + MER5B DNA MER1_type 21 172 -6 641 130 0 20 chr2 105896489 105896589 -144791265 + AluSg/x SINE Alu 212 309 0 7476 140 28 38 chr2 105896602 105896616 -144791238 + L1M4c LINE L1 1082 1095 -5287 2176 136 0 3 chr2 105896616 105896926 -144790928 + AluSx SINE Alu 1 309 -3 7476 140 28 38 chr2 105896926 105898176 -144789678 + L1M4c LINE L1 1095 2334 -4048 2324 112 0 6 chr2 105898176 105898490 -144789364 + AluSx SINE Alu 1 312 0 7476 140 28 38 chr2 105898490 105898706 -144789148 + L1M4c LINE L1 2334 2551 -3831 2989 142 2 19 chr2 105898706 105899191 -144788663 + L1MB3 LINE L1 5700 6176 -7 303 28 0 0 chr2 105899529 105899565 -144788289 + (TG)n Simple_repeat Simple_repeat 1 36 0 352 94 0 0 chr2 105900644 105900697 -144787157 - MADE1 DNA Mariner 0 80 28 426 218 40 10 chr2 105900818 105900919 -144786935 - L2 LINE L2 -2 3311 3208 241 231 44 77 chr2 105901048 105901139 -144786715 - L2 LINE L2 0 3313 3226 264 333 12 12 chr2 105901186 105901267 -144786587 + LTR67 LTR ERVL 120 200 -357 232 208 57 0 chr2 105901428 105901481 -144786373 + LTR67 LTR ERVL 485 540 -17 23 0 0 0 chr2 105901686 105901709 -144786145 + AT_rich Low_complexity Low_complexity 1 23 0 345 306 0 0 chr2 105903384 105903492 -144784362 + MIR SINE MIR 115 222 -40 2071 126 7 0 chr2 105903514 105903823 -144784031 - AluSq SINE Alu 0 313 3 2119 108 0 69 chr2 105904033 105904367 -144783487 + AluSx SINE Alu 1 311 -1 2305 107 0 3 chr2 105904389 105904699 -144783155 + AluSq SINE Alu 1 309 -4 490 256 137 0 chr2 105905228 105905345 -144782509 - FLAM_A SINE Alu 0 133 1 21 0 0 0 chr2 105905351 105905372 -144782482 + AT_rich Low_complexity Low_complexity 1 21 0 2220 167 3 15 chr2 105905931 105906272 -144781582 - MER1B DNA MER1_type 0 337 1 2249 144 9 68 chr2 105906387 105906639 -144781215 + L1MB3 LINE L1 5621 5839 -344 6151 118 21 3 chr2 105906639 105908084 -144779770 + L1PA16 LINE L1 4697 6162 -4 2249 144 9 68 chr2 105908084 105908255 -144779599 + L1MB3 LINE L1 5839 6019 -164 27 49 0 0 chr2 105908255 105908296 -144779558 + AT_rich Low_complexity Low_complexity 1 41 0 1823 106 0 0 chr2 105908299 105908536 -144779318 - AluSx SINE Alu -75 237 1 1097 143 6 0 chr2 105908536 105908704 -144779150 + L1MB3 LINE L1 6005 6173 -10 291 253 107 0 chr2 105908868 105908943 -144778911 - MER5A DNA MER1_type -61 128 46 1722 227 149 34 chr2 105908948 105908992 -144778862 - MLT1F1 LTR MaLR -6 561 523 2725 152 29 9 chr2 105908992 105909412 -144778442 + MSTA LTR MaLR 1 428 0 1722 227 149 34 chr2 105909412 105909848 -144778006 - MLT1F1 LTR MaLR -44 523 20 3546 87 34 0 chr2 105909848 105910318 -144777536 - LTR19A LTR ERV1 0 486 1 1722 227 149 34 chr2 105910318 105910334 -144777520 - MLT1F1 LTR MaLR -547 20 7 1537 244 78 12 chr2 105910349 105910772 -144777082 - MLT1C LTR MaLR -9 458 8 325 143 0 0 chr2 105910772 105910821 -144777033 - MER5A DNA MER1_type -140 49 1 252 358 30 30 chr2 105910821 105910970 -144776884 - MIR3 SINE MIR -53 155 7 693 313 132 14 chr2 105911595 105912026 -144775828 - L1ME3A LINE L1 -219 5951 5470 2421 87 0 3 chr2 105912191 105912503 -144775351 - AluSq SINE Alu -2 311 1 563 169 8 65 chr2 105913240 105913364 -144774490 + FLAM_C SINE Alu 1 117 -16 273 213 125 0 chr2 105913386 105913466 -144774388 - L1MC4 LINE L1 -1339 6703 6614 1146 130 0 0 chr2 105913466 105913658 -144774196 + AluJb SINE Alu 130 321 0 30 59 0 0 chr2 105914722 105914773 -144773081 + AT_rich Low_complexity Low_complexity 1 51 0 551 280 59 38 chr2 105914927 105915166 -144772688 - MIR SINE MIR -6 256 13 1627 134 46 5 chr2 105915702 105915996 -144771858 - MER61B LTR ERV1 -29 396 2 385 287 66 0 chr2 105917418 105917554 -144770300 + MIR SINE MIR 118 262 0 1942 126 87 0 chr2 105917586 105917872 -144769982 - AluSx SINE Alu -1 311 1 2365 134 30 5 chr2 105917958 105918331 -144769523 - MLT1B LTR MaLR -8 382 1 2574 153 18 18 chr2 105918419 105918871 -144768983 + L1MA6 LINE L1 5849 6300 0 211 132 0 26 chr2 105920040 105920078 -144767776 + (GAAAA)n Simple_repeat Simple_repeat 4 40 0 451 250 74 66 chr2 105921318 105921562 -144766292 + MIR SINE MIR 8 253 -9 2154 77 18 0 chr2 105922120 105922495 -144765359 + AluSc SINE Alu 1 380 0 936 211 54 2 chr2 105923809 105924029 -144763825 - L1MD3 LINE L1 -11 7984 6087 302 193 51 57 chr2 105926548 105926670 -144761184 - L1MC5 LINE L1 0 7995 7822 2458 191 43 18 chr2 105926722 105927094 -144760760 - L1MB2 LINE L1 -1 6406 6014 315 0 0 0 chr2 105927094 105927129 -144760725 + (CA)n Simple_repeat Simple_repeat 1 35 0 2458 191 43 18 chr2 105927129 105927320 -144760534 - L1MB2 LINE L1 -393 6014 5829 260 56 56 0 chr2 105927323 105927359 -144760495 - MER58A DNA MER1_type -28 79 42 2444 214 45 50 chr2 105927371 105927702 -144760152 + L1ME LINE L1 4672 5003 -1163 2135 132 3 7 chr2 105927702 105928012 -144759842 + AluSx SINE Alu 1 309 -3 2444 214 45 50 chr2 105928012 105928794 -144759060 + L1ME LINE L1 5003 5792 -374 39277 83 7 7 chr2 105928861 105935004 -144752850 - L1PA6 LINE L1 0 6154 11 9319 239 40 24 chr2 105935014 105937508 -144750346 - L1MB2 LINE L1 -562 5845 3394 2378 81 0 3 chr2 105937508 105937806 -144750048 - AluY SINE Alu -14 297 1 9319 239 40 24 chr2 105937806 105938606 -144749248 - L1MB2 LINE L1 -3013 3394 2374 2192 116 0 0 chr2 105938606 105938900 -144748954 - AluY SINE Alu -17 294 1 9319 239 40 24 chr2 105938900 105939229 -144748625 - L1MB2 LINE L1 -4033 2374 2052 1140 206 77 82 chr2 105939242 105939582 -144748272 - MER2 DNA MER2_type -7 338 1 3286 232 29 6 chr2 105939668 105940473 -144747381 - L1MB2 LINE L1 -4513 1871 1049 1102 190 5 25 chr2 105940473 105940707 -144747147 - AluJb SINE Alu 0 316 87 694 272 16 107 chr2 105940707 105940915 -144746939 - L1M3c LINE L1 -4841 1300 1151 746 196 8 23 chr2 105940915 105941048 -144746806 - FLAM_A SINE Alu -1 132 2 694 272 16 107 chr2 105941048 105941277 -144746577 - L1M3c LINE L1 -4990 1151 903 965 303 42 32 chr2 105941403 105941803 -144746051 - L1M3c LINE L1 -5487 644 241 1429 215 83 20 chr2 105941809 105942256 -144745598 - L1MC5 LINE L1 -177 7784 7310 371 220 50 64 chr2 105942699 105942840 -144745014 + MLT1L LTR MaLR 180 318 -297 323 287 74 16 chr2 105942917 105943039 -144744815 + MLT1L LTR MaLR 479 607 -8 858 272 107 67 chr2 105944848 105945326 -144742528 + LTR33 LTR ERVL 25 521 0 2290 107 0 0 chr2 105945552 105945851 -144742003 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr2 105946701 105946722 -144741132 + AT_rich Low_complexity Low_complexity 1 21 0 192 158 0 0 chr2 105946968 105947006 -144740848 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 203 327 71 54 chr2 105947193 105947361 -144740493 - L2 LINE L2 -169 3103 2933 551 314 295 7 chr2 105947371 105947977 -144739877 + L2 LINE L2 2052 2832 -482 595 298 90 48 chr2 105948005 105948337 -144739517 + L2 LINE L2 2967 3312 -1 27 0 0 0 chr2 105948945 105948972 -144738882 + AT_rich Low_complexity Low_complexity 1 27 0 2153 102 0 23 chr2 105949139 105949442 -144738412 - AluSx SINE Alu -16 296 1 699 231 63 46 chr2 105949695 105949962 -144737892 + MLT1G1 LTR MaLR 11 321 -274 368 265 139 47 chr2 105950106 105950418 -144737436 - MLT1G LTR MaLR -240 350 13 196 324 90 9 chr2 105950434 105950545 -144737309 - L2 LINE L2 -538 2776 2657 2153 71 4 7 chr2 105950802 105951124 -144736730 + AluY SINE Alu 1 321 0 244 322 111 33 chr2 105951537 105951717 -144736137 - MIR SINE MIR -34 228 35 1734 197 323 2 chr2 105952244 105952844 -144735010 - LTR50 LTR ERVL 0 795 3 222 322 50 8 chr2 105953847 105953968 -144733886 + L2 LINE L2 2511 2636 -678 331 143 0 0 chr2 105953968 105954017 -144733837 - MLT2B1 LTR ERVL 0 464 416 204 135 0 0 chr2 105954031 105954068 -144733786 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 204 40 0 0 chr2 105954091 105954116 -144733738 + (TA)n Simple_repeat Simple_repeat 2 26 0 237 272 14 14 chr2 105954135 105954282 -144733572 + (TA)n Simple_repeat Simple_repeat 1 147 0 315 0 0 0 chr2 105954308 105954343 -144733511 + (TA)n Simple_repeat Simple_repeat 1 35 0 297 0 0 0 chr2 105954342 105954375 -144733479 + (GA)n Simple_repeat Simple_repeat 2 34 0 * 2470 198 22 2 chr2 105954375 105954819 -144733035 - MLT2B1 LTR ERVL -65 455 3 590 359 46 8 chr2 105954821 105955083 -144732771 + L2 LINE L2 2632 2903 -411 1233 38 0 32 chr2 105955168 105955354 -144732500 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 544 300 86 46 chr2 105956117 105956397 -144731457 + L2 LINE L2 3019 3309 -4 1916 173 40 28 chr2 105957264 105957656 -144730198 - MLT1A1 LTR MaLR 0 365 1 2217 106 10 0 chr2 105958050 105958352 -144729502 - AluSq SINE Alu -8 305 1 1474 98 6 0 chr2 105959306 105959489 -144728365 + AluSx SINE Alu 3 186 -126 301 196 11 11 chr2 105959592 105959684 -144728170 + (CCA)n Simple_repeat Simple_repeat 1 92 0 487 287 95 38 chr2 105959814 105960003 -144727851 - MLT1L LTR MaLR -4 611 434 1711 214 11 19 chr2 105960003 105960368 -144727486 + MLT1A1 LTR MaLR 4 365 0 487 287 95 38 chr2 105960368 105960454 -144727400 - MLT1L LTR MaLR -181 434 239 239 224 66 53 chr2 105961973 105962049 -144725805 - L2 LINE L2 0 3272 3196 2384 103 0 0 chr2 105962443 105962744 -144725110 + AluSx SINE Alu 1 301 -11 367 274 52 49 chr2 105962799 105962965 -144724889 + MIR SINE MIR 20 184 -58 24 0 0 0 chr2 105963136 105963160 -144724694 + AT_rich Low_complexity Low_complexity 1 24 0 3701 64 70 10 chr2 105963160 105963645 -144724209 + L1PA8 LINE L1 5657 6170 -2 1426 175 97 15 chr2 105964000 105964269 -144723585 + AluJo SINE Alu 1 291 -21 1392 244 96 90 chr2 105965037 105965331 -144722523 - L2 LINE L2 0 3313 3022 2205 105 10 19 chr2 105965331 105965644 -144722210 - AluSg SINE Alu 0 310 1 1392 244 96 90 chr2 105965644 105966296 -144721558 - L2 LINE L2 -291 3022 2362 484 102 11 91 chr2 105966398 105966486 -144721368 - MLT1A2 LTR MaLR -293 81 1 909 107 27 20 chr2 105966486 105966635 -144721219 + L1MB1 LINE L1 5794 5943 -225 2537 65 8 60 chr2 105966648 105967017 -144720837 - THE1A LTR MaLR -5 350 1 395 159 43 0 chr2 105967020 105967089 -144720765 - L1M3 LINE L1 -611 5560 5489 52 41 0 0 chr2 105967127 105967200 -144720654 + AT_rich Low_complexity Low_complexity 1 73 0 298 196 18 0 chr2 105969402 105969458 -144718396 + MLT1H LTR MaLR 105 161 -388 551 213 178 5 chr2 105969459 105969656 -144718198 + LTR50 LTR ERVL 557 787 -8 1073 160 21 5 chr2 105969972 105970159 -144717695 - L1PB3 LINE L1 -2 6152 5963 2215 147 0 0 chr2 105970770 105971076 -144716778 + AluSx SINE Alu 1 306 -6 272 320 62 22 chr2 105971126 105971304 -144716550 + HAL1b LINE L1 247 431 -917 502 338 50 55 chr2 105971457 105971859 -144715995 + L1 LINE L1 3727 4126 -2020 311 321 81 43 chr2 105971975 105972085 -144715769 + L1 LINE L1 4306 4410 -1736 2235 109 0 3 chr2 105972085 105972378 -144715476 + AluSx SINE Alu 2 293 -19 311 321 81 43 chr2 105972378 105972613 -144715241 + L1 LINE L1 4410 4664 -1482 2815 208 25 44 chr2 105972667 105973609 -144714245 + L1M4 LINE L1 1302 2226 -4811 374 261 33 22 chr2 105973604 105973696 -144714158 + L1MEd LINE L1 561 653 -5466 * 21 36 0 0 chr2 105973834 105973862 -144713992 + AT_rich Low_complexity Low_complexity 1 28 0 1772 175 3 3 chr2 105975098 105975401 -144712453 + AluJo SINE Alu 1 303 -9 325 209 99 0 chr2 105975643 105975734 -144712120 + HAL1 LINE L1 1437 1536 -971 1651 181 3 28 chr2 105975877 105976197 -144711657 - AluJb SINE Alu 0 312 1 200 184 0 0 chr2 105976547 105976585 -144711269 + (TG)n Simple_repeat Simple_repeat 1 38 0 862 228 56 0 chr2 105977199 105977396 -144710458 - MER58A DNA MER1_type -10 214 7 2325 163 18 23 chr2 105977690 105978082 -144709772 - MLT1B LTR MaLR 0 390 1 1283 256 81 25 chr2 105978323 105978718 -144709136 + MER77 LTR ERV1 206 597 -8 2648 236 98 60 chr2 105979004 105979144 -144708710 + L1M4 LINE L1 4157 4290 -2816 363 43 0 0 chr2 105979144 105979190 -144708664 + MADE1 DNA Mariner 1 46 -34 2648 236 98 60 chr2 105979190 105979278 -144708576 + L1M4 LINE L1 4290 4373 -2733 1451 70 65 5 chr2 105979278 105979318 -144708536 - MER107 DNA MER1_type 0 197 161 195 42 0 0 chr2 105979318 105979342 -144708512 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1451 70 65 5 chr2 105979342 105979487 -144708367 - MER107 DNA MER1_type -36 161 1 2648 236 98 60 chr2 105979487 105979800 -144708054 + L1M4 LINE L1 4373 4673 -2433 189 0 0 0 chr2 105979800 105979821 -144708033 + (TC)n Simple_repeat Simple_repeat 1 21 0 2648 236 98 60 chr2 105979821 105980404 -144707450 + L1M4 LINE L1 4673 5373 -1733 2067 90 0 0 chr2 105980404 105980670 -144707184 + AluY SINE Alu 41 306 -5 429 81 0 0 chr2 105980670 105980732 -144707122 + (TA)n Simple_repeat Simple_repeat 2 63 0 2373 97 0 0 chr2 105981026 105981336 -144706518 - AluSx SINE Alu -2 310 1 5868 130 59 20 chr2 105981528 105982567 -144705287 - Tigger3b DNA MER2_type -26 1205 127 1945 199 61 23 chr2 105982568 105983010 -144704844 - LTR2B LTR ERV1 0 490 32 669 233 0 0 chr2 105983029 105983158 -144704696 - Tigger3b DNA MER2_type -1102 129 1 23 0 0 0 chr2 105983333 105983356 -144704498 + AT_rich Low_complexity Low_complexity 1 23 0 2167 98 0 0 chr2 105983430 105983734 -144704120 + AluSq SINE Alu 9 312 0 2893 109 49 7 chr2 105983766 105984430 -144703424 - MER4E LTR ERV1 -1 765 2 630 266 174 19 chr2 105986216 105986641 -144701213 - L2 LINE L2 -876 2438 1948 295 240 107 9 chr2 105987112 105987240 -144700614 - L1MC/D LINE L1 -351 5815 5677 203 225 0 0 chr2 105987339 105987379 -144700475 - L2 LINE L2 -14 3258 3219 26 0 0 0 chr2 105987696 105987722 -144700132 + AT_rich Low_complexity Low_complexity 1 26 0 323 257 154 7 chr2 105987830 105987966 -144699888 - MER112 DNA MER1_type -104 156 1 21 36 0 0 chr2 105989167 105989195 -144698659 + AT_rich Low_complexity Low_complexity 1 28 0 1397 194 64 42 chr2 105989478 105989838 -144698016 - MLT1E LTR MaLR -1 592 225 247 192 19 0 chr2 105989874 105989926 -144697928 - MLT1E LTR MaLR -489 53 1 208 342 66 13 chr2 105990177 105990253 -144697601 + L2 LINE L2 3188 3267 -5 806 252 57 40 chr2 105990265 105990689 -144697165 - L1MC5 LINE L1 -32 7929 7499 2125 122 0 10 chr2 105991054 105991366 -144696488 - AluSg SINE Alu -1 309 1 2256 101 10 0 chr2 105991370 105991666 -144696188 - AluSx SINE Alu -13 299 1 21 0 0 0 chr2 105991896 105991917 -144695937 + AT_rich Low_complexity Low_complexity 1 21 0 578 71 0 12 chr2 105993577 105993662 -144694192 + (TA)n Simple_repeat Simple_repeat 1 84 0 3554 222 28 53 chr2 105993662 105994396 -144693458 + L1ME1 LINE L1 4408 5159 -1007 695 204 0 8 chr2 105994396 105994528 -144693326 - FLAM_A SINE Alu -2 131 1 3554 222 28 53 chr2 105994528 105995603 -144692251 + L1ME1 LINE L1 5159 6158 -8 10880 184 13 13 chr2 105995930 105997739 -144690115 - L1PB1 LINE L1 0 6151 4313 315 0 0 0 chr2 105997739 105997774 -144690080 + (TG)n Simple_repeat Simple_repeat 2 36 0 10880 184 13 13 chr2 105997774 105999225 -144688629 - L1PB1 LINE L1 -1838 4313 2864 2222 112 0 3 chr2 105999249 105999553 -144688301 - AluSx SINE Alu -7 305 3 181 156 44 22 chr2 105999659 105999704 -144688150 + L2 LINE L2 1371 1416 -1898 286 308 50 19 chr2 105999854 106000013 -144687841 + L2 LINE L2 2226 2389 -925 1402 25 0 0 chr2 106001264 106001424 -144686430 - L1PA3 LINE L1 -496 5659 5500 4074 29 0 8 chr2 106001424 106001908 -144685946 + L1PA3 LINE L1 5673 6155 0 2179 129 0 0 chr2 106003517 106003827 -144684027 - AluSx SINE Alu 0 312 3 1497 164 38 13 chr2 106004178 106004496 -144683358 - L1MB8 LINE L1 -213 5965 5640 4173 240 39 78 chr2 106004497 106006152 -144681702 - L1MB8 LINE L1 -1054 5092 3504 651 172 0 33 chr2 106006332 106006454 -144681400 - FLAM_C SINE Alu -15 118 1 257 254 86 44 chr2 106007460 106007577 -144680277 + MIR SINE MIR 46 166 -64 25 0 0 0 chr2 106009982 106010007 -144677847 + AT_rich Low_complexity Low_complexity 1 25 0 2342 83 0 13 chr2 106011813 106012115 -144675739 - AluSg SINE Alu -11 299 2 198 0 0 0 chr2 106013156 106013178 -144674676 + (A)n Simple_repeat Simple_repeat 1 22 0 1100 231 14 11 chr2 106013438 106013719 -144674135 - AluSx SINE Alu -30 282 1 2554 62 3 0 chr2 106013969 106014275 -144673579 + AluY SINE Alu 2 308 -3 619 213 13 27 chr2 106015862 106016012 -144671842 - MER3 DNA MER1_type -55 154 7 922 167 36 0 chr2 106016265 106016433 -144671421 + FAM SINE Alu 1 174 -1 200 192 19 39 chr2 106016483 106016535 -144671319 + (TATG)n Simple_repeat Simple_repeat 4 54 0 321 265 132 39 chr2 106016652 106016856 -144670998 - L1MC4 LINE L1 -71 7971 7749 233 286 45 90 chr2 106017852 106017985 -144669869 - L2 LINE L2 -214 3058 2932 203 342 214 0 chr2 106018171 106018288 -144669566 + L2 LINE L2 3126 3267 -5 232 282 223 10 chr2 106018439 106018542 -144669312 + MIR SINE MIR 21 145 -117 192 152 0 0 chr2 106019082 106019115 -144668739 + A-rich Low_complexity Low_complexity 1 33 0 690 124 0 0 chr2 106069686 106069783 -144618071 - AluSg/x SINE Alu -29 280 184 237 33 0 0 chr2 106069783 106069813 -144618041 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2112 90 7 0 chr2 106069813 106070090 -144617764 - AluSc SINE Alu -30 279 1 1992 120 0 0 chr2 106072693 106072959 -144614895 + AluSq SINE Alu 37 302 -11 446 291 74 11 chr2 106073050 106073239 -144614615 + L2 LINE L2 3113 3313 0 204 351 58 26 chr2 106074613 106074767 -144613087 - MER5A DNA MER1_type -21 168 10 231 229 277 0 chr2 106075493 106075576 -144612278 - MIR3 SINE MIR -98 110 5 1777 161 22 54 chr2 106076176 106076586 -144611268 - L1MA7 LINE L1 -10 6281 5885 1979 134 0 0 chr2 106076587 106076907 -144610947 + L1MA7 LINE L1 5544 5863 -428 1074 271 34 29 chr2 106076890 106077273 -144610581 - HAL1 LINE L1 -2115 392 8 * 183 139 0 0 chr2 106079966 106080002 -144607852 + (GTTTG)n Simple_repeat Simple_repeat 4 39 0 22 35 0 0 chr2 106080697 106080726 -144607128 + AT_rich Low_complexity Low_complexity 1 29 0 205 342 8 60 chr2 106081044 106081161 -144606693 - L2 LINE L2 -14 3299 3189 231 167 0 0 chr2 106082066 106082108 -144605746 + (TATG)n Simple_repeat Simple_repeat 3 44 0 308 239 114 0 chr2 106082568 106082656 -144605198 - MER103 DNA DNA -66 100 3 180 97 0 0 chr2 106083105 106083136 -144604718 + (TG)n Simple_repeat Simple_repeat 2 32 0 326 296 5 58 chr2 106083179 106083368 -144604486 + (TG)n Simple_repeat Simple_repeat 2 180 0 294 125 0 0 chr2 106083782 106083830 -144604024 + (CAT)n Simple_repeat Simple_repeat 2 49 0 272 293 143 36 chr2 106084754 106084894 -144602960 - MIR SINE MIR -38 170 16 24 32 0 0 chr2 106084972 106085003 -144602851 + AT_rich Low_complexity Low_complexity 1 31 0 5619 86 30 19 chr2 106085178 106086034 -144601820 - SVA Other Other -520 866 1 19882 46 3 3 chr2 106086035 106088556 -144599298 - L1P LINE L1 -3624 2522 1 24 32 0 0 chr2 106088597 106088628 -144599226 + AT_rich Low_complexity Low_complexity 1 31 0 1993 152 3 3 chr2 106088628 106088938 -144598916 - AluJb SINE Alu -2 310 1 1469 226 9 16 chr2 106088938 106089380 -144598474 - L1M3 LINE L1 -740 5440 5001 274 241 101 0 chr2 106090743 106090822 -144597032 + L2 LINE L2 3183 3269 -44 2072 181 40 20 chr2 106091068 106091472 -144596382 - MLT2D LTR ERVL -2 412 1 330 303 92 33 chr2 106092364 106092516 -144595338 - MIR SINE MIR -74 188 28 302 330 30 0 chr2 106093132 106093232 -144594622 - L2 LINE L2 -1 3312 3210 302 225 65 95 chr2 106093537 106093706 -144594148 + MER112 DNA MER1_type 2 165 -95 513 320 163 41 chr2 106093756 106094363 -144593491 - L2 LINE L2 -512 2802 2122 189 213 100 50 chr2 106094374 106094454 -144593400 + L2 LINE L2 2686 2769 -545 956 288 86 36 chr2 106095110 106095736 -144592118 - L2 LINE L2 0 3313 2633 237 307 123 9 chr2 106096015 106096129 -144591725 - MIR SINE MIR -79 183 57 265 315 77 14 chr2 106096158 106096301 -144591553 - L1ME LINE L1 -352 5769 5618 1222 181 34 0 chr2 106097038 106097275 -144590579 + L1MB2 LINE L1 5920 6164 -7 201 197 49 33 chr2 106097624 106097685 -144590169 + L2 LINE L2 1694 1755 -1559 2273 151 63 57 chr2 106097759 106098161 -144589693 - MER74A LTR ERVL 0 558 151 2313 95 3 19 chr2 106098161 106098478 -144589376 + AluSq SINE Alu 1 312 -1 2273 151 63 57 chr2 106098478 106098599 -144589255 - MER74A LTR ERVL -407 151 32 380 346 51 0 chr2 106098715 106098871 -144588983 + MER5B DNA MER1_type 5 168 -10 1739 150 3 60 chr2 106099997 106100311 -144587543 + AluJb SINE Alu 1 296 -16 234 0 0 0 chr2 106100581 106100607 -144587247 + (TTA)n Simple_repeat Simple_repeat 2 27 0 683 110 0 0 chr2 106100609 106100700 -144587154 - AluSg/x SINE Alu -24 285 195 1446 102 23 23 chr2 106100800 106101016 -144586838 - AluSp SINE Alu -97 216 1 1661 215 63 12 chr2 106101429 106101857 -144585997 + MLT1C LTR MaLR 6 455 -12 329 294 75 27 chr2 106102080 106102226 -144585628 - MIR SINE MIR -37 225 73 5426 151 76 22 chr2 106102570 106103441 -144584413 + L1MC1 LINE L1 4847 5669 -664 2175 179 8 6 chr2 106103441 106103805 -144584049 - MLT1A1 LTR MaLR 0 365 1 5426 151 76 22 chr2 106103805 106103971 -144583883 + L1MC1 LINE L1 5669 5824 -509 1830 172 27 9 chr2 106103971 106104309 -144583545 + MER2 DNA MER2_type 1 344 0 5426 151 76 22 chr2 106104309 106104688 -144583166 + L1MC1 LINE L1 5824 6333 0 465 19 0 0 chr2 106104840 106104894 -144582960 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 776 113 0 0 chr2 106104903 106105009 -144582845 - FLAM_C SINE Alu -36 107 2 305 302 40 32 chr2 106105142 106105268 -144582586 - MER5A DNA MER1_type -56 133 7 2099 125 0 4 chr2 106105900 106106181 -144581673 + AluSx SINE Alu 1 280 -32 421 218 218 0 chr2 106106275 106106422 -144581432 - MIR SINE MIR -69 193 15 2124 120 0 0 chr2 106106726 106107027 -144580827 + AluSx SINE Alu 9 309 -3 589 269 0 18 chr2 106107109 106107280 -144580574 + L1MB8 LINE L1 6010 6177 -1 2303 109 0 0 chr2 106107292 106107595 -144580259 + AluSq SINE Alu 1 303 -10 1642 129 24 50 chr2 106108252 106108640 -144579214 - Charlie3 DNA MER1_type 0 2712 1 243 334 124 2 chr2 106108879 106109049 -144578805 + MIR SINE MIR 3 191 -68 372 244 173 16 chr2 106109778 106109905 -144577949 + MIR SINE MIR 4 150 -112 567 232 46 26 chr2 106109961 106110112 -144577742 - MER5A DNA MER1_type -35 154 1 187 286 125 0 chr2 106110116 106110172 -144577682 + MIR SINE MIR 200 262 0 195 162 0 0 chr2 106110720 106110757 -144577097 + (TA)n Simple_repeat Simple_repeat 2 38 0 578 166 11 11 chr2 106112072 106112248 -144575606 + GA-rich Low_complexity Low_complexity 1 176 0 2674 45 0 0 chr2 106112387 106112698 -144575156 - AluY SINE Alu 0 311 1 271 270 54 0 chr2 106113975 106114049 -144573805 - MIR SINE MIR -88 174 97 1698 177 31 0 chr2 106114554 106114848 -144573006 - AluJo SINE Alu -9 303 1 508 192 0 29 chr2 106114931 106115035 -144572819 + L1MD2 LINE L1 6231 6331 -28 383 201 147 88 chr2 106115111 106115315 -144572539 + L1MA10 LINE L1 6106 6321 -13 316 279 16 98 chr2 106115368 106115490 -144572364 - L2 LINE L2 0 3313 3202 561 299 24 6 chr2 106118447 106118611 -144569243 + MIR3 SINE MIR 35 201 -7 353 258 108 0 chr2 106118659 106118752 -144569102 - L2 LINE L2 0 3272 3170 22 56 0 0 chr2 106119365 106119401 -144568453 + AT_rich Low_complexity Low_complexity 1 36 0 1675 201 94 0 chr2 106119492 106119820 -144568034 - MLT1A1 LTR MaLR -4 361 3 2079 113 53 0 chr2 106120143 106120425 -144567429 - AluSx SINE Alu -15 297 1 180 0 0 0 chr2 106120432 106120452 -144567402 + (TTA)n Simple_repeat Simple_repeat 2 21 0 337 384 31 0 chr2 106121058 106121217 -144566637 + MIR SINE MIR 81 244 -18 3552 163 73 35 chr2 106121341 106121633 -144566221 - MER21B LTR ERV1 -98 765 486 2494 113 25 0 chr2 106121633 106121988 -144565866 - THE1B LTR MaLR 0 364 1 3552 163 73 35 chr2 106121988 106122432 -144565422 - MER21B LTR ERV1 -377 486 1 419 189 91 30 chr2 106123081 106123173 -144564681 - MLT1J LTR MaLR -369 142 38 1975 138 6 22 chr2 106123173 106123484 -144564370 + AluJo SINE Alu 1 306 -6 419 189 91 30 chr2 106123484 106123523 -144564331 - MLT1J LTR MaLR -473 38 3 277 39 118 0 chr2 106124741 106124792 -144563062 + CT-rich Low_complexity Low_complexity 5 61 0 10594 32 7 109 chr2 106124792 106126346 -144561508 + SVA Other Other 1 1399 0 2433 73 0 7 chr2 106126928 106127230 -144560624 - AluY SINE Alu -11 300 1 2278 99 3 3 chr2 106127306 106127609 -144560245 - AluSx SINE Alu -9 303 1 1871 166 0 13 chr2 106127609 106127911 -144559943 - AluJo SINE Alu -14 298 1 288 303 106 30 chr2 106128027 106128357 -144559497 - L1ME4a LINE L1 -144 5977 5623 22 35 0 0 chr2 106128639 106128668 -144559186 + AT_rich Low_complexity Low_complexity 1 29 0 952 250 44 34 chr2 106129004 106129388 -144558466 - L1MC5 LINE L1 -62 7899 7512 290 87 22 0 chr2 106129843 106129889 -144557965 + (CA)n Simple_repeat Simple_repeat 2 48 0 2780 80 11 0 chr2 106129993 106130344 -144557510 - THE1A LTR MaLR 0 355 1 12271 91 2 7 chr2 106130345 106130651 -144557203 - THE1A-int LTR MaLR -1 1579 1273 2335 88 0 29 chr2 106130651 106130957 -144556897 - AluY SINE Alu -14 297 1 12271 91 2 7 chr2 106130957 106132236 -144555618 - THE1A-int LTR MaLR -307 1273 2 2720 96 3 0 chr2 106132237 106132591 -144555263 - THE1A LTR MaLR 0 355 1 366 241 207 7 chr2 106132705 106132850 -144555004 - MLT1J LTR MaLR -337 174 1 186 300 92 54 chr2 106132859 106132989 -144554865 - L2 LINE L2 -956 2358 2224 264 298 50 31 chr2 106133117 106133278 -144554576 - L2 LINE L2 -771 2543 2380 528 284 24 0 chr2 106133392 106133519 -144554335 + MIR SINE MIR 23 152 -110 189 303 92 0 chr2 106133611 106133687 -144554167 - L2 LINE L2 -1019 2295 2213 214 234 0 0 chr2 106133930 106133977 -144553877 + L2 LINE L2 3225 3271 -1 1582 224 28 22 chr2 106134600 106134957 -144552897 + MLT1A1 LTR MaLR 7 365 0 250 179 0 104 chr2 106134957 106135024 -144552830 - MIR3 SINE MIR -42 166 107 351 278 138 58 chr2 106135229 106135607 -144552247 - MLT1I LTR MaLR 0 409 2 586 194 11 17 chr2 106135954 106136129 -144551725 + CT-rich Low_complexity Low_complexity 3 176 0 619 288 194 6 chr2 106136293 106136623 -144551231 + MLT1G LTR MaLR 10 401 -189 1012 211 132 18 chr2 106136644 106136971 -144550883 - MLT1A1 LTR MaLR -1 364 1 500 212 38 71 chr2 106137114 106137298 -144550556 - L1MC5 LINE L1 -85 7876 7699 947 215 96 4 chr2 106137362 106137622 -144550232 + MLT1C LTR MaLR 1 284 -183 916 219 6 6 chr2 106137738 106137916 -144549938 + MLT1C LTR MaLR 290 467 0 2201 99 7 0 chr2 106137932 106138235 -144549619 - AluSx SINE Alu -7 305 1 251 298 24 0 chr2 106139250 106139334 -144548520 + MIR3 SINE MIR 93 178 -30 401 219 236 0 chr2 106140518 106140638 -144547216 + MIR SINE MIR 34 181 -61 6802 85 25 3 chr2 106140894 106141852 -144546002 - L1MA2 LINE L1 -2 6302 5324 1309 184 27 12 chr2 106141857 106142113 -144545741 - AluJb SINE Alu -22 290 31 473 232 108 54 chr2 106142243 106142428 -144545426 - L2 LINE L2 -949 2365 2171 1202 171 32 32 chr2 106142635 106142886 -144544968 - MER96B DNA MER1_type? 0 417 167 323 270 128 47 chr2 106142948 106143096 -144544758 - MER5B DNA MER1_type -14 164 5 546 268 225 33 chr2 106143677 106144178 -144543676 - L2 LINE L2 -1 3312 2701 210 265 45 83 chr2 106144907 106145039 -144542815 - L2 LINE L2 -7 3306 3180 2275 91 0 3 chr2 106145207 106145516 -144542338 + AluSc SINE Alu 1 308 -1 220 236 55 0 chr2 106145560 106145615 -144542239 - L2 LINE L2 -4 3268 3211 2654 144 59 2 chr2 106145735 106146194 -144541660 - MER31A LTR ERV1 0 485 1 417 294 104 25 chr2 106147584 106147747 -144540107 - L2 LINE L2 0 3313 3138 477 259 190 71 chr2 106147794 106148230 -144539624 + MLT1H LTR MaLR 49 536 -13 243 284 22 67 chr2 106148254 106148388 -144539466 - L2 LINE L2 -173 3140 3013 518 289 117 6 chr2 106148398 106148578 -144539276 - MIR SINE MIR -7 255 56 1762 222 82 82 chr2 106148590 106148856 -144538998 - MER21B LTR ERV1 -125 738 473 1517 153 6 132 chr2 106148856 106149213 -144538641 - AluJb SINE Alu 0 302 1 1762 222 82 82 chr2 106149213 106149645 -144538209 - MER21B LTR ERV1 -389 474 40 628 284 29 32 chr2 106149671 106149981 -144537873 + L1MEd LINE L1 949 1257 -4862 1025 194 0 6 chr2 106149996 106150161 -144537693 + MER21B LTR ERV1 329 492 -371 588 233 0 53 chr2 106150490 106150640 -144537214 + FLAM_C SINE Alu 2 143 0 271 255 101 67 chr2 106150648 106150856 -144536998 + HAL1 LINE L1 1372 1586 -921 4552 111 9 66 chr2 106151199 106151293 -144536561 + L1PB4 LINE L1 5408 5506 -650 2178 121 0 0 chr2 106151293 106151600 -144536254 + AluSx SINE Alu 1 307 -5 4552 111 9 66 chr2 106151600 106152291 -144535563 + L1PB4 LINE L1 5506 6148 -8 2418 55 3 0 chr2 106152300 106152593 -144535261 + AluY SINE Alu 1 294 -17 1581 176 36 3 chr2 106153798 106154100 -144533754 + AluJo SINE Alu 1 312 0 193 149 419 0 chr2 106154272 106154346 -144533508 + MER5A DNA MER1_type 78 182 -7 1830 172 11 40 chr2 106154954 106155327 -144532527 - MLT1A1 LTR MaLR -1 364 3 2223 99 7 0 chr2 106155755 106156058 -144531796 + AluY SINE Alu 1 305 -6 225 270 22 11 chr2 106156397 106156486 -144531368 - L2 LINE L2 -149 3164 3075 7209 124 17 14 chr2 106156504 106158406 -144529448 + L1MA2 LINE L1 4185 6097 -207 2072 132 82 15 chr2 106158406 106158747 -144529107 + THE1B LTR MaLR 1 364 0 7209 124 17 14 chr2 106158747 106158956 -144528898 + L1MA2 LINE L1 6097 6304 0 2379 258 91 63 chr2 106158971 106159692 -144528162 - L2 LINE L2 -267 3046 2278 1535 173 0 28 chr2 106159692 106159981 -144527873 + AluJo SINE Alu 13 293 -19 2379 258 91 63 chr2 106159981 106160353 -144527501 - L2 LINE L2 -1035 2278 1918 1120 206 87 4 chr2 106160353 106160630 -144527224 + MER97b DNA MER1_type? 4 303 -750 361 311 110 6 chr2 106160659 106160823 -144527031 + MER97b DNA MER1_type? 351 531 -522 947 205 0 43 chr2 106160826 106161012 -144526842 + AluJo SINE Alu 82 260 -52 1558 144 122 88 chr2 106161012 106161422 -144526432 - MSTA LTR MaLR -4 424 1 947 205 0 43 chr2 106161422 106161445 -144526409 + AluJo SINE Alu 260 282 -30 1121 224 138 0 chr2 106161445 106161771 -144526083 + MER97a DNA MER1_type? 520 890 -4 479 262 41 7 chr2 106161776 106161921 -144525933 - L2 LINE L2 -1405 1909 1760 251 226 179 24 chr2 106161943 106162027 -144525827 + AluJo SINE Alu 54 150 -152 1523 179 0 14 chr2 106162031 106162316 -144525538 + AluJo SINE Alu 20 300 -12 397 264 237 40 chr2 106162345 106162746 -144525108 - L2 LINE L2 -1636 1678 1199 372 312 70 21 chr2 106162755 106162941 -144524913 + MIR SINE MIR 47 241 -21 201 236 175 0 chr2 106163257 106163334 -144524520 + MIR SINE MIR 32 124 -109 466 264 47 62 chr2 106163334 106163527 -144524327 + MIR SINE MIR 70 259 -3 3852 172 25 19 chr2 106163556 106164290 -144523564 - L1MB2 LINE L1 -2 6169 5432 1968 131 7 0 chr2 106164290 106164588 -144523266 - AluSx SINE Alu -12 300 1 24103 35 1 0 chr2 106164604 106168253 -144519601 - L1PA3 LINE L1 0 6155 2507 6430 130 6 129 chr2 106168257 106169984 -144517870 - SVA Other Other 0 1386 79 198 103 0 0 chr2 106170004 106170033 -144517821 + (A)n Simple_repeat Simple_repeat 1 29 0 336 179 47 94 chr2 106170089 106170195 -144517659 + L1MC4 LINE L1 6609 6709 -1333 287 146 18 0 chr2 106170218 106170273 -144517581 + (CATA)n Simple_repeat Simple_repeat 3 58 0 2141 100 3 10 chr2 106171470 106171781 -144516073 - AluSq SINE Alu -4 309 1 6201 145 59 30 chr2 106171950 106173146 -144514708 + Tigger3b DNA MER2_type 1 1231 0 1393 225 40 27 chr2 106174248 106174621 -144513233 + L1MD3 LINE L1 7598 7975 -20 193 294 101 37 chr2 106175239 106175348 -144512506 + MIR3 SINE MIR 43 158 -50 346 234 39 0 chr2 106175432 106175509 -144512345 - MIR SINE MIR -181 81 2 302 321 9 38 chr2 106175693 106175799 -144512055 - MIR SINE MIR -141 121 19 559 267 120 53 chr2 106175937 106176237 -144511617 - L3 LINE CR1 -1084 493 174 324 246 100 55 chr2 106176441 106176551 -144511303 - L1MC4 LINE L1 -1314 6728 6614 1847 166 0 3 chr2 106176749 106177050 -144510804 + AluJb SINE Alu 1 300 -12 1779 141 10 23 chr2 106177595 106177900 -144509954 + AluJo SINE Alu 1 301 -11 237 267 147 0 chr2 106177973 106178048 -144509806 + L3 LINE CR1 1387 1472 -105 519 247 121 16 chr2 106178360 106178542 -144509312 - MIR SINE MIR -13 249 49 311 210 5 91 chr2 106179769 106180004 -144507850 + C-rich Low_complexity Low_complexity 1 214 0 26 0 0 0 chr2 106180095 106180121 -144507733 + GC_rich Low_complexity Low_complexity 1 26 0 218 60 0 120 chr2 106181021 106181071 -144506783 + (A)n Simple_repeat Simple_repeat 1 44 0 211 282 262 0 chr2 106181319 106181422 -144506432 - MIR3 SINE MIR -29 179 50 26 0 0 0 chr2 106181647 106181673 -144506181 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr2 106182099 106182123 -144505731 + AT_rich Low_complexity Low_complexity 1 24 0 181 167 83 0 chr2 106182313 106182349 -144505505 + L2 LINE L2 3209 3247 -66 1878 132 20 10 chr2 106182424 106182719 -144505135 - AluSx SINE Alu -14 298 1 303 75 94 19 chr2 106182843 106182896 -144504958 - MIR SINE MIR -24 238 182 347 255 66 38 chr2 106182959 106183065 -144504789 - L2 LINE L2 -6 3307 3199 904 225 16 5 chr2 106183070 106183257 -144504597 + MER5A DNA MER1_type 1 189 0 199 224 0 20 chr2 106183390 106183439 -144504415 - L2 LINE L2 -4 3268 3221 1905 173 52 0 chr2 106183472 106183819 -144504035 + MLT1A1 LTR MaLR 1 365 0 1997 118 28 7 chr2 106183960 106184247 -144503607 - AluSx SINE Alu -19 293 1 451 227 39 39 chr2 106184372 106184500 -144503354 - L2 LINE L2 0 3272 3145 329 211 0 0 chr2 106185112 106185183 -144502671 + MER5A DNA MER1_type 40 110 -79 198 287 117 11 chr2 106185683 106185777 -144502077 - MIR SINE MIR -50 212 109 194 275 132 33 chr2 106185984 106186075 -144501779 - MIR SINE MIR -65 143 44 331 274 66 19 chr2 106186294 106186400 -144501454 + MIR3 SINE MIR 82 192 -16 1554 189 20 10 chr2 106186621 106186918 -144500936 - AluJo SINE Alu -8 304 5 574 227 131 21 chr2 106187098 106187291 -144500563 + MIR SINE MIR 47 262 0 606 231 16 54 chr2 106188333 106188519 -144499335 - MIR3 SINE MIR -9 199 21 649 216 111 18 chr2 106188728 106188899 -144498955 - MER5A DNA MER1_type -2 187 1 1177 242 193 47 chr2 106190152 106190889 -144496965 - L2 LINE L2 0 3313 2444 368 242 38 53 chr2 106191659 106191791 -144496063 - MIR3 SINE MIR -5 203 74 281 145 36 116 chr2 106192016 106192130 -144495724 - MER5A DNA MER1_type -83 106 4 2121 91 25 3 chr2 106192205 106192491 -144495363 + AluSq SINE Alu 1 292 -21 229 250 19 0 chr2 106193863 106193937 -144493917 - MIR SINE MIR -87 121 45 31 0 0 0 chr2 106194152 106194183 -144493671 + AT_rich Low_complexity Low_complexity 1 31 0 492 338 10 29 chr2 106194353 106194557 -144493297 - MIR SINE MIR -42 220 21 1917 109 46 36 chr2 106194883 106195186 -144492668 - AluSx SINE Alu -6 306 1 396 259 26 95 chr2 106195269 106195458 -144492396 - MER5B DNA MER1_type 0 178 3 205 138 0 0 chr2 106195827 106195856 -144491998 + (TCCC)n Simple_repeat Simple_repeat 4 32 0 2386 85 3 3 chr2 106195990 106196285 -144491569 + AluSp SINE Alu 1 295 -18 23 33 0 0 chr2 106197743 106197773 -144490081 + AT_rich Low_complexity Low_complexity 1 30 0 216 357 0 0 chr2 106198305 106198389 -144489465 + T-rich Low_complexity Low_complexity 5 88 0 276 30 0 0 chr2 106198837 106198870 -144488984 + (TA)n Simple_repeat Simple_repeat 2 34 0 1048 157 12 0 chr2 106199538 106199704 -144488150 - FRAM SINE Alu -9 167 1 259 253 267 32 chr2 106199892 106200113 -144487741 - L2 LINE L2 -18 3295 3023 404 209 13 23 chr2 106200190 106200342 -144487512 + MLT1H LTR MaLR 75 280 -269 466 212 77 88 chr2 106200391 106200561 -144487293 + MLT1H LTR MaLR 424 586 -4 238 281 193 12 chr2 106200561 106200732 -144487122 - L2 LINE L2 -349 2965 2764 6331 163 75 58 chr2 106201043 106202532 -144485322 - L1MC3 LINE L1 -1 7784 6270 2430 77 0 13 chr2 106202740 106203053 -144484801 - AluSc SINE Alu 0 309 1 1681 175 87 45 chr2 106203247 106203625 -144484229 - MSTD LTR MaLR -2 394 1 224 319 110 18 chr2 106203873 106204036 -144483818 + MIR3 SINE MIR 30 207 -1 2084 127 0 10 chr2 106204692 106204999 -144482855 + AluSq SINE Alu 1 304 -9 220 184 41 20 chr2 106205492 106205541 -144482313 + GA-rich Low_complexity Low_complexity 1 50 0 366 355 57 21 chr2 106205571 106205906 -144481948 + L1MEd LINE L1 480 826 -5293 423 0 0 0 chr2 106206080 106206127 -144481727 + (TG)n Simple_repeat Simple_repeat 2 48 0 250 203 0 34 chr2 106206213 106206272 -144481582 - MER58A DNA MER1_type -3 104 48 795 180 0 8 chr2 106206272 106206400 -144481454 + AluJo SINE Alu 1 127 -175 2186 108 0 3 chr2 106206417 106206704 -144481150 + AluSx SINE Alu 1 286 -26 1164 158 0 0 chr2 106206737 106206908 -144480946 + AluJo SINE Alu 136 306 -6 250 229 21 0 chr2 106206908 106206956 -144480898 - MER58A DNA MER1_type -175 49 1 1807 192 36 61 chr2 106207117 106207250 -144480604 - L1ME LINE L1 -4834 1144 1009 1021 181 23 0 chr2 106207250 106207421 -144480433 - FAM SINE Alu 0 175 1 1807 192 36 61 chr2 106207421 106207756 -144480098 - L1ME LINE L1 -4969 1009 688 1286 201 38 38 chr2 106207756 106208099 -144479755 + MER2 DNA MER2_type 2 344 0 1807 192 36 61 chr2 106208099 106208154 -144479700 - L1ME LINE L1 -5290 688 633 311 314 9 9 chr2 106208165 106208270 -144479584 - L1M4 LINE L1 -5674 1181 1077 1013 248 58 48 chr2 106208282 106209025 -144478829 - L1M4 LINE L1 -5636 1223 70 1482 231 124 14 chr2 106209077 106209505 -144478349 - L1ME LINE L1 -5593 477 3 2331 94 14 3 chr2 106210332 106210629 -144477225 + AluSx SINE Alu 1 300 -12 1678 142 97 34 chr2 106210792 106211144 -144476710 + MLT1A2 LTR MaLR 1 374 0 2640 165 22 34 chr2 106211265 106211399 -144476455 + MER74A LTR ERVL 1 135 -423 1854 154 3 16 chr2 106211399 106211704 -144476150 - AluJo SINE Alu -6 306 6 2640 165 22 34 chr2 106211704 106212103 -144475751 + MER74A LTR ERVL 135 528 -30 4309 59 18 0 chr2 106212778 106213322 -144474532 + MER41A LTR ERV1 1 554 0 2137 136 76 0 chr2 106213350 106213717 -144474137 - L1MB3 LINE L1 -1 6182 5788 352 256 11 0 chr2 106213980 106214070 -144473784 + L2 LINE L2 3182 3272 0 1980 165 53 64 chr2 106214346 106214816 -144473038 + MLT2B1 LTR ERVL 1 343 -54 396 0 0 0 chr2 106214816 106214860 -144472994 + (CA)n Simple_repeat Simple_repeat 2 45 0 1980 165 53 64 chr2 106214860 106214915 -144472939 + MLT2B1 LTR ERVL 343 397 0 23 54 0 0 chr2 106216078 106216115 -144471739 + AT_rich Low_complexity Low_complexity 1 37 0 2466 128 8 18 chr2 106216167 106216212 -144471642 + L1MB3 LINE L1 5788 5832 -351 2154 127 3 3 chr2 106216212 106216512 -144471342 + AluSx SINE Alu 1 300 -12 2466 128 8 18 chr2 106216512 106216866 -144470988 + L1MB3 LINE L1 5832 6183 0 2263 108 0 0 chr2 106217555 106217843 -144470011 + AluSx SINE Alu 1 288 -24 180 0 0 0 chr2 106217852 106217872 -144469982 + (CAAGG)n Simple_repeat Simple_repeat 3 22 0 2332 164 44 2 chr2 106218254 106218663 -144469191 + MSTB LTR MaLR 1 426 0 2261 100 0 26 chr2 106219681 106219990 -144467864 + AluSq SINE Alu 1 301 -12 21 0 0 0 chr2 106220510 106220531 -144467323 + AT_rich Low_complexity Low_complexity 1 21 0 2378 61 0 4 chr2 106221274 106221553 -144466301 + AluSc SINE Alu 1 278 -31 260 324 29 22 chr2 106223960 106224096 -144463758 - MIR3 SINE MIR -3 205 69 210 391 138 23 chr2 106224313 106224617 -144463237 - L2 LINE L2 -2 3270 2932 432 284 22 15 chr2 106224937 106225071 -144462783 + MIR SINE MIR 107 241 -21 396 273 8 8 chr2 106227629 106227750 -144460104 + MIR SINE MIR 59 179 -83 1492 209 138 3 chr2 106227802 106228151 -144459703 - MER82 DNA MER2_type -1 652 257 745 164 0 31 chr2 106228672 106228800 -144459054 + FLAM_C SINE Alu 1 124 -9 297 207 0 0 chr2 106229893 106229951 -144457903 + L1MA10 LINE L1 6276 6333 -1 195 129 0 0 chr2 106231799 106231830 -144456024 + (A)n Simple_repeat Simple_repeat 1 31 0 226 336 62 0 chr2 106233215 106233328 -144454526 + MIR SINE MIR 51 170 -92 1701 157 7 25 chr2 106233867 106234147 -144453707 + AluJo SINE Alu 14 288 -24 405 0 0 0 chr2 106234151 106234196 -144453658 + (TG)n Simple_repeat Simple_repeat 2 46 0 283 343 28 0 chr2 106234559 106234686 -144453168 + MIR SINE MIR 20 153 -55 239 227 62 31 chr2 106235125 106235222 -144452632 - MIR3 SINE MIR -1 207 108 1850 168 3 10 chr2 106235345 106235643 -144452211 - AluJo SINE Alu -16 296 1 2468 84 0 25 chr2 106235838 106236158 -144451696 + AluSx SINE Alu 1 312 0 1043 196 27 27 chr2 106237879 106238098 -144449756 + MER20 DNA MER1_type 1 219 0 1817 167 7 10 chr2 106238625 106238930 -144448924 + AluJo SINE Alu 1 304 -8 200 343 29 7 chr2 106241476 106241613 -144446241 - MIR SINE MIR -110 152 13 2073 153 18 20 chr2 106243079 106243471 -144444383 + L1MB3 LINE L1 5793 6183 0 560 315 32 0 chr2 106243573 106243789 -144444065 + MIR SINE MIR 31 253 -9 366 256 0 0 chr2 106244972 106245062 -144442792 - MER103 DNA DNA -34 132 43 565 286 104 39 chr2 106245757 106246141 -144441713 - L1ME LINE L1 -340 5781 5351 1984 137 7 26 chr2 106246141 106246448 -144441406 - AluSx SINE Alu -11 301 1 565 286 104 39 chr2 106246448 106246553 -144441301 - L1ME LINE L1 -770 5351 5254 300 120 0 0 chr2 106246646 106246696 -144441158 + (GA)n Simple_repeat Simple_repeat 1 50 0 387 0 0 0 chr2 106246698 106246741 -144441113 + (TG)n Simple_repeat Simple_repeat 1 43 0 2124 115 0 7 chr2 106246804 106247099 -144440755 + AluSx SINE Alu 1 293 -19 1330 209 72 36 chr2 106247143 106247502 -144440352 + MLT1A2 LTR MaLR 1 372 -2 1827 133 33 3 chr2 106247560 106247861 -144439993 + L1MB3 LINE L1 5697 6006 -177 419 269 81 46 chr2 106247940 106248200 -144439654 + HAL1b LINE L1 345 613 -735 231 262 0 8 chr2 106248639 106248762 -144439092 + GA-rich Low_complexity Low_complexity 1 121 0 351 258 129 42 chr2 106248837 106249054 -144438800 + L1MC4a LINE L1 6091 6326 -1482 295 288 14 48 chr2 106249115 106249261 -144438593 + L1MC5 LINE L1 7607 7747 -214 270 0 0 0 chr2 106250388 106250418 -144437436 + (TG)n Simple_repeat Simple_repeat 2 31 0 2606 56 0 0 chr2 106251611 106251913 -144435941 + AluSc SINE Alu 1 302 -7 187 309 200 23 chr2 106252199 106252374 -144435480 + MIR SINE MIR 52 257 -5 273 98 0 0 chr2 106252823 106252864 -144434990 + (T)n Simple_repeat Simple_repeat 1 41 0 24 0 0 0 chr2 106253003 106253027 -144434827 + AT_rich Low_complexity Low_complexity 1 24 0 198 266 156 28 chr2 106253547 106253656 -144434198 + L2 LINE L2 3145 3267 -5 559 274 33 30 chr2 106253670 106254021 -144433833 + L1MC4 LINE L1 7640 8041 -1 501 340 47 60 chr2 106254213 106254513 -144433341 + L2 LINE L2 2935 3230 -42 2015 160 0 6 chr2 106255077 106255389 -144432465 + AluJb SINE Alu 1 310 -2 783 185 0 0 chr2 106255695 106255825 -144432029 + FLAM_A SINE Alu 2 131 -2 2388 86 7 0 chr2 106256515 106256817 -144431037 - AluSx SINE Alu -8 304 1 338 300 122 52 chr2 106256820 106257022 -144430832 + L1MC4a LINE L1 4746 4933 -1213 1553 191 11 3 chr2 106257022 106257326 -144430528 + AluJb SINE Alu 1 306 0 338 300 122 52 chr2 106257326 106257383 -144430471 + L1MC4a LINE L1 4933 4985 -1161 2136 110 7 7 chr2 106257383 106257682 -144430172 + AluSx SINE Alu 1 299 -13 338 300 122 52 chr2 106257682 106257810 -144430044 + L1MC4a LINE L1 4985 5103 -1043 958 182 24 0 chr2 106257810 106257980 -144429874 - FAM SINE Alu 0 175 2 338 300 122 52 chr2 106257980 106258086 -144429768 + L1MC4a LINE L1 5103 5277 -869 1671 228 108 21 chr2 106258089 106258646 -144429208 + L1MC4a LINE L1 5295 5899 -1909 423 285 162 0 chr2 106258780 106259015 -144428839 + L1MC4a LINE L1 6091 6363 -1445 856 167 0 0 chr2 106259230 106259362 -144428492 + FLAM_A SINE Alu 2 133 0 629 250 180 17 chr2 106259363 106259663 -144428191 + L1MC4 LINE L1 6613 6976 -1000 1166 207 106 96 chr2 106259699 106260452 -144427402 + L1MC5 LINE L1 7166 7926 -35 2011 127 122 86 chr2 106260516 106260581 -144427273 + L1MC1 LINE L1 5814 5875 -458 2334 79 0 0 chr2 106260581 106260860 -144426994 + AluSx SINE Alu 1 279 -33 2011 127 122 86 chr2 106260860 106261289 -144426565 + L1MC1 LINE L1 5875 6328 -5 24 0 0 0 chr2 106261724 106261748 -144426106 + AT_rich Low_complexity Low_complexity 1 24 0 2141 98 35 0 chr2 106261748 106262035 -144425819 - AluSx SINE Alu -15 297 1 2370 91 10 0 chr2 106262135 106262442 -144425412 - AluSp SINE Alu -3 310 1 2208 125 13 54 chr2 106262485 106262596 -144425258 + LTR60 LTR ERV1 1 115 -471 2136 134 0 7 chr2 106262596 106262902 -144424952 + AluSx SINE Alu 1 304 -8 2208 125 13 54 chr2 106262902 106263296 -144424558 + LTR60 LTR ERV1 115 586 0 243 293 12 0 chr2 106263324 106263406 -144424448 + TAR1 Satellite telomeric 197 279 -1832 195 139 0 0 chr2 106264592 106264628 -144423226 + (CA)n Simple_repeat Simple_repeat 1 36 0 501 141 24 0 chr2 106264777 106264862 -144422992 + FLAM_A SINE Alu 47 133 -9 347 303 51 28 chr2 106265479 106265657 -144422197 + L3 LINE CR1 1394 1575 -2 1928 175 40 14 chr2 106265840 106266189 -144421665 + MLT1A1 LTR MaLR 1 358 -7 455 193 123 0 chr2 106266203 106266317 -144421537 + MIR SINE MIR 117 244 -18 213 65 0 0 chr2 106267227 106267258 -144420596 + (A)n Simple_repeat Simple_repeat 1 31 0 1094 182 0 14 chr2 106267487 106267696 -144420158 + AluJo SINE Alu 107 312 0 2193 99 3 33 chr2 106267698 106268002 -144419852 + AluSq SINE Alu 1 295 -18 641 179 16 32 chr2 106268276 106268399 -144419455 + AluJo SINE Alu 14 134 -178 21 82 0 0 chr2 106268399 106268448 -144419406 + AT_rich Low_complexity Low_complexity 1 49 0 2434 91 0 0 chr2 106268911 106269209 -144418645 + AluSq SINE Alu 1 298 -15 300 186 341 72 chr2 106269508 106269911 -144417943 + L1 LINE L1 3504 3797 -2349 277 22 67 0 chr2 106269911 106269956 -144417898 + (TTAAA)n Simple_repeat Simple_repeat 5 52 0 300 186 341 72 chr2 106269956 106270004 -144417850 + L1 LINE L1 3797 3831 -2315 1296 160 129 55 chr2 106270004 106270325 -144417529 + MLT1B LTR MaLR 1 353 -37 2652 49 7 0 chr2 106270325 106270631 -144417223 - AluY SINE Alu -3 308 1 1296 160 129 55 chr2 106270631 106270672 -144417182 + MLT1B LTR MaLR 353 390 0 300 186 341 72 chr2 106270672 106270748 -144417106 + L1 LINE L1 3831 3885 -2261 2394 94 0 3 chr2 106270748 106271055 -144416799 + AluSx SINE Alu 1 306 -6 300 186 341 72 chr2 106271055 106271326 -144416528 + L1 LINE L1 3885 4500 -1646 684 224 86 0 chr2 106271342 106271516 -144416338 + L1ME LINE L1 4615 4803 -1343 * 2995 211 84 24 chr2 106271513 106272426 -144415428 + L1ME2 LINE L1 5203 6164 0 387 0 0 0 chr2 106272502 106272545 -144415309 + (TG)n Simple_repeat Simple_repeat 1 43 0 195 42 0 0 chr2 106272544 106272568 -144415286 + (CG)n Simple_repeat Simple_repeat 2 25 0 * 2247 99 3 26 chr2 106272606 106272910 -144414944 + AluSx SINE Alu 1 297 -15 2275 105 3 0 chr2 106273239 106273535 -144414319 + AluSc SINE Alu 2 298 -11 725 297 54 26 chr2 106273537 106274068 -144413786 + L1ME LINE L1 4955 5500 -664 23 0 0 0 chr2 106274525 106274548 -144413306 + AT_rich Low_complexity Low_complexity 1 23 0 229 360 0 13 chr2 106275141 106275216 -144412638 - AluS SINE Alu -1 299 226 257 240 13 0 chr2 106275216 106275291 -144412563 + T-rich Low_complexity Low_complexity 3 78 0 1583 68 5 0 chr2 106275410 106275602 -144412252 - AluY SINE Alu -118 193 1 346 324 0 19 chr2 106278771 106278879 -144408975 + MIR SINE MIR 47 152 -110 2050 104 18 4 chr2 106278922 106279230 -144408624 + AluSx SINE Alu 1 312 0 480 295 9 20 chr2 106279674 106279867 -144407987 - MIR SINE MIR -60 202 10 1327 150 8 43 chr2 106280570 106280804 -144407050 + AluSg/x SINE Alu 70 295 -15 2226 106 0 16 chr2 106280869 106281180 -144406674 + AluSx SINE Alu 1 306 -6 2098 95 0 89 chr2 106281683 106282020 -144405834 - AluSx SINE Alu -5 307 1 180 136 68 17 chr2 106282096 106282155 -144405699 + CT-rich Low_complexity Low_complexity 3 64 0 390 223 21 0 chr2 106282849 106282943 -144404911 + L2 LINE L2 3210 3305 -8 1089 137 16 22 chr2 106283281 106283463 -144404391 - AluJo SINE Alu -15 297 117 560 200 16 32 chr2 106283842 106283967 -144403887 + MER58A DNA MER1_type 27 149 0 484 195 35 0 chr2 106283998 106284085 -144403769 + MER58A DNA MER1_type 135 224 0 1692 155 17 20 chr2 106285038 106285334 -144402520 + AluJb SINE Alu 1 295 -17 1851 138 13 30 chr2 106335941 106336246 -144351608 - AluSx SINE Alu -12 300 1 721 53 0 9 chr2 106336483 106336495 -144351359 + L1P LINE L1 4054 4065 -2081 3335 26 0 0 chr2 106336495 106336881 -144350973 - L1PA2 LINE L1 0 6155 5770 721 53 0 9 chr2 106336881 106336957 -144350897 + L1P LINE L1 4065 4142 -2004 190 300 14 93 chr2 106337036 106337176 -144350678 + L2 LINE L2 2983 3111 -161 3593 149 14 37 chr2 106337343 106337603 -144350251 - MER49 LTR ERV1 -287 636 372 2591 59 3 0 chr2 106337603 106337909 -144349945 - AluY SINE Alu -4 307 1 3593 149 14 37 chr2 106337909 106338276 -144349578 - MER49 LTR ERV1 -551 372 22 1672 117 4 0 chr2 106338276 106338507 -144349347 - AluSg/x SINE Alu -6 304 73 3593 149 14 37 chr2 106338507 106338529 -144349325 - MER49 LTR ERV1 -901 22 1 788 257 86 47 chr2 106339421 106339830 -144348024 + LTR16A1 LTR ERVL 20 444 -13 2366 85 7 7 chr2 106339999 106340304 -144347550 + AluSp SINE Alu 1 305 -8 416 237 65 0 chr2 106340408 106340501 -144347353 + LTR54 LTR ERV1 1 99 -411 636 240 172 31 chr2 106340519 106340792 -144347062 + MER57A LTR ERV1 127 403 0 22 35 0 0 chr2 106341557 106341586 -144346268 + AT_rich Low_complexity Low_complexity 1 29 0 594 251 140 0 chr2 106341920 106342127 -144345727 - L1MA9 LINE L1 -41 6271 6036 251 255 155 37 chr2 106342117 106342278 -144345576 - L1MEc LINE L1 -4299 2097 1918 * 23 0 0 0 chr2 106342484 106342507 -144345347 + AT_rich Low_complexity Low_complexity 1 23 0 2362 139 15 22 chr2 106342598 106343000 -144344854 - L1PA15 LINE L1 -3 6162 5764 203 197 33 33 chr2 106343678 106343739 -144344115 + GA-rich Low_complexity Low_complexity 4 64 0 1327 147 5 68 chr2 106343972 106344297 -144343557 + Tigger5 DNA MER2_type 2033 2323 0 300 259 33 75 chr2 106345978 106346190 -144341664 + MLT1H LTR MaLR 126 328 -221 228 217 78 62 chr2 106346193 106346290 -144341564 + MLT1I LTR MaLR 289 376 -33 1645 60 0 32 chr2 106347257 106347473 -144340381 - AluY SINE Alu -2 309 101 262 169 14 28 chr2 106347539 106347610 -144340244 + (TATG)n Simple_repeat Simple_repeat 2 71 0 191 296 130 0 chr2 106348366 106348481 -144339373 - MIR SINE MIR -8 254 125 572 295 30 20 chr2 106349086 106349286 -144338568 + MIR SINE MIR 61 262 0 1146 182 116 23 chr2 106349573 106349831 -144338023 - AluJo SINE Alu -30 282 1 212 171 0 0 chr2 106351136 106351177 -144336677 + A-rich Low_complexity Low_complexity 1 41 0 981 206 122 87 chr2 106351460 106351828 -144336026 - MSTD LTR MaLR 0 396 16 2087 137 13 0 chr2 106351828 106352134 -144335720 + AluSx SINE Alu 1 310 -2 2281 101 3 0 chr2 106352157 106352454 -144335400 + AluSp SINE Alu 16 313 0 2092 128 0 10 chr2 106352863 106353161 -144334693 + AluSx SINE Alu 1 295 -17 2272 102 0 19 chr2 106353671 106353985 -144333869 + AluSg SINE Alu 1 308 -2 2419 60 3 3 chr2 106354316 106354614 -144333240 - AluY SINE Alu -13 298 1 415 210 28 91 chr2 106354787 106354828 -144333026 - MER94 DNA DNA 0 134 92 4487 202 91 116 chr2 106354828 106356627 -144331227 + MER52A LTR ERV1 1 1755 0 415 210 28 91 chr2 106356627 106356728 -144331126 - MER94 DNA DNA -42 92 1 344 283 136 49 chr2 106357463 106358301 -144329553 + L1MEc LINE L1 791 1701 -4695 927 281 47 17 chr2 106358326 106358732 -144329122 + L1MEc LINE L1 2714 3131 -3084 5750 64 0 3 chr2 106358891 106359605 -144328249 - L1PA5 LINE L1 -1 6153 5442 248 53 26 0 chr2 106359729 106359767 -144328087 + (CA)n Simple_repeat Simple_repeat 2 40 0 2023 245 121 47 chr2 106359772 106360295 -144327559 + L1MB2 LINE L1 4032 4515 -1631 180 0 0 0 chr2 106360295 106360315 -144327539 + (TG)n Simple_repeat Simple_repeat 2 21 0 2023 245 121 47 chr2 106360315 106360600 -144327254 + L1MB2 LINE L1 4515 4778 -1368 1614 186 20 24 chr2 106360600 106360896 -144326958 - AluJb SINE Alu -17 295 1 2023 245 121 47 chr2 106360896 106361206 -144326648 + L1MB2 LINE L1 4778 5233 -913 289 260 79 84 chr2 106361257 106361433 -144326421 + L1MB2 LINE L1 5349 5526 -638 2174 96 11 0 chr2 106361433 106361744 -144326110 + AluSx SINE Alu 1 314 0 289 260 79 84 chr2 106361744 106361793 -144326061 + L1MB2 LINE L1 5526 5574 -590 * 919 222 95 62 chr2 106361791 106362129 -144325725 + L1ME3A LINE L1 5817 6165 -5 6167 135 20 21 chr2 106362152 106363262 -144324592 + L1MA8 LINE L1 5177 6287 -4 2570 33 7 13 chr2 106363493 106363798 -144324056 - AluY SINE Alu -8 303 1 225 271 107 21 chr2 106363929 106364069 -144323785 + L2 LINE L2 2365 2516 -798 1055 77 8 0 chr2 106364102 106364232 -144323622 + AluSg SINE Alu 1 131 -179 1369 124 89 0 chr2 106364332 106364534 -144323320 + AluSg/x SINE Alu 73 292 -18 1630 138 0 8 chr2 106364767 106365021 -144322833 + L1MB2 LINE L1 5629 5880 -291 237 230 89 4 chr2 106365686 106365763 -144322091 - MIR SINE MIR -76 132 53 1443 192 42 28 chr2 106366194 106366480 -144321374 - AluJo SINE Alu -22 290 1 3959 175 56 45 chr2 106366510 106367240 -144320614 - MER21B LTR ERV1 -49 814 94 219 36 0 0 chr2 106367240 106367268 -144320586 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 2044 148 0 0 chr2 106367268 106367552 -144320302 - AluSx SINE Alu -28 284 1 3959 175 56 45 chr2 106367552 106367624 -144320230 - MER21B LTR ERV1 -768 95 2 478 265 102 29 chr2 106367744 106367989 -144319865 + L1MC4a LINE L1 5668 5930 -1878 21 57 0 0 chr2 106368163 106368198 -144319656 + AT_rich Low_complexity Low_complexity 1 35 0 5453 188 70 52 chr2 106368754 106369801 -144318053 - Charlie1a DNA MER1_type -1337 1424 398 2385 88 0 0 chr2 106369801 106370097 -144317757 + AluSc SINE Alu 1 296 -13 2080 133 10 3 chr2 106370103 106370411 -144317443 + AluSx SINE Alu 2 311 -1 5453 188 70 52 chr2 106370411 106370752 -144317102 - Charlie1a DNA MER1_type -2367 394 3 2030 147 9 6 chr2 106371394 106371721 -144316133 + MER44D DNA MER2_type 8 605 -4 921 240 76 117 chr2 106371856 106371908 -144315946 + MER34 LTR ERV1 11 64 -478 1277 118 5 5 chr2 106371908 106372103 -144315751 - L1PB1 LINE L1 0 6151 5957 921 240 76 117 chr2 106372103 106372605 -144315249 + MER34 LTR ERV1 64 542 0 2587 146 39 20 chr2 106372760 106373218 -144314636 - MLT1C LTR MaLR 0 467 1 2206 140 3 12 chr2 106373326 106373662 -144314192 - MER1B DNA MER1_type -6 333 1 7080 56 9 0 chr2 106376297 106377715 -144310139 + L1PA7 LINE L1 4716 6139 -15 3247 205 19 79 chr2 106377722 106378752 -144309102 + LTR5 LTR ERVK 1 969 0 345 224 0 24 chr2 106379983 106380068 -144307786 + MER112 DNA MER1_type 137 219 -41 343 207 122 0 chr2 106380534 106380616 -144307238 - MER94 DNA DNA -42 92 1 212 329 49 49 chr2 106381908 106381950 -144305904 + MIR SINE MIR 41 82 -180 2457 174 69 17 chr2 106381950 106382428 -144305426 + MLT1D LTR MaLR 3 505 0 212 329 49 49 chr2 106382428 106382528 -144305326 + MIR SINE MIR 81 183 -79 270 295 137 7 chr2 106382615 106382754 -144305100 - MIR SINE MIR -70 192 36 2964 182 104 12 chr2 106382883 106383079 -144304775 + MER39 LTR ERV1 2 179 -528 2179 100 0 3 chr2 106383079 106383369 -144304485 + AluSq SINE Alu 1 289 -24 2964 182 104 12 chr2 106383369 106383819 -144304035 + MER39 LTR ERV1 179 707 0 840 249 140 29 chr2 106384011 106384565 -144303289 - L2 LINE L2 -1 3312 2691 263 315 0 0 chr2 106385460 106385552 -144302302 + (CA)n Simple_repeat Simple_repeat 2 93 0 2235 119 0 3 chr2 106385989 106386300 -144301554 - AluSx SINE Alu -2 310 1 193 277 161 9 chr2 106386380 106386492 -144301362 + MIR SINE MIR 43 171 -91 2306 107 13 0 chr2 106387108 106387416 -144300438 + AluSx SINE Alu 1 312 0 260 143 66 132 chr2 106387473 106387564 -144300290 + MIR SINE MIR 117 201 -61 527 170 21 11 chr2 106387601 106387695 -144300159 - FLAM_A SINE Alu -16 126 32 258 178 47 108 chr2 106387919 106388048 -144299806 - L1ME LINE L1 -237 5884 5764 1984 102 0 11 chr2 106388389 106388681 -144299173 + AluSx SINE Alu 32 293 -19 21 71 0 0 chr2 106389370 106389412 -144298442 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr2 106389992 106390014 -144297840 + AT_rich Low_complexity Low_complexity 1 22 0 527 82 50 182 chr2 106390099 106390258 -144297596 + L1MA4A LINE L1 6159 6296 -7 371 333 0 30 chr2 106392145 106392313 -144295541 + L1ME4a LINE L1 5624 5786 -335 979 171 0 0 chr2 106392338 106392496 -144295358 + FRAM SINE Alu 11 168 -8 1879 98 0 55 chr2 106392598 106392872 -144294982 + AluSq SINE Alu 13 271 -42 271 226 98 15 chr2 106392958 106393091 -144294763 + L1ME4a LINE L1 5974 6117 -4 183 115 0 82 chr2 106393319 106393380 -144294474 + (GAAAA)n Simple_repeat Simple_repeat 4 59 0 1544 197 90 52 chr2 106394228 106394650 -144293204 - MER34C LTR ERV1 0 585 148 3623 178 56 12 chr2 106394695 106395267 -144292587 + MER39 LTR ERV1 1 609 -98 1690 159 10 37 chr2 106395267 106395563 -144292291 - AluJo SINE Alu -19 293 6 3623 178 56 12 chr2 106395563 106395665 -144292189 + MER39 LTR ERV1 609 705 -2 212 244 51 39 chr2 106395993 106396071 -144291783 - L2 LINE L2 -1 3271 3193 345 269 25 42 chr2 106396238 106396357 -144291497 - L2 LINE L2 0 3313 3197 1634 171 6 6 chr2 106397492 106397848 -144290006 - Ricksha DNA DNA -15 2839 2545 * 4648 143 40 37 chr2 106397839 106397921 -144289933 - Ricksha DNA DNA -375 2871 2791 2218 108 0 19 chr2 106397921 106398236 -144289618 + AluSg SINE Alu 2 310 0 4648 143 40 37 chr2 106398236 106398981 -144288873 - Ricksha DNA DNA -455 2791 2042 492 204 10 29 chr2 106398990 106399093 -144288761 - Ricksha DNA DNA -1938 108 8 396 271 45 15 chr2 106399699 106399832 -144288022 + LTR33 LTR ERVL 52 188 -333 2304 157 32 36 chr2 106399917 106400358 -144287496 - L1MB3 LINE L1 -8 6175 5737 254 291 60 8 chr2 106401034 106401151 -144286703 + LTR33A LTR ERVL 389 511 -12 1773 112 97 0 chr2 106401151 106401418 -144286436 - AluSq SINE Alu -20 293 1 2165 105 7 3 chr2 106402905 106403199 -144284655 - AluSq SINE Alu -18 295 1 398 249 53 89 chr2 106403954 106404119 -144283735 + L1ME LINE L1 5255 5409 -712 1914 151 10 0 chr2 106404119 106404417 -144283437 + AluJb SINE Alu 1 301 -11 398 249 53 89 chr2 106404417 106404579 -144283275 + L1ME LINE L1 5409 5575 -546 1131 218 48 82 chr2 106404580 106404957 -144282897 + MLT2D LTR ERVL 1 364 -50 242 143 0 0 chr2 106405044 106405086 -144282768 - LTR66 LTR ERVL -171 439 398 250 302 35 0 chr2 106405106 106405192 -144282662 + L1ME LINE L1 5572 5660 -461 340 74 0 56 chr2 106405271 106405325 -144282529 - MADE1 DNA Mariner 0 80 30 1541 164 0 30 chr2 106405326 106405594 -144282260 + AluJb SINE Alu 41 300 -12 2000 130 0 0 chr2 106405653 106405929 -144281925 + AluSq SINE Alu 1 276 -37 2037 148 3 25 chr2 106406167 106406485 -144281369 - AluJo SINE Alu 0 312 2 1808 87 4 4 chr2 106406998 106407228 -144280626 + AluSx SINE Alu 1 230 -82 836 182 13 13 chr2 106407447 106407601 -144280253 + MER49 LTR ERV1 761 914 -9 2870 87 10 25 chr2 106407605 106407931 -144279923 - L1PA13 LINE L1 -11 6152 5831 2066 135 0 26 chr2 106407931 106408242 -144279612 - AluSx SINE Alu -9 303 1 2870 87 10 25 chr2 106408242 106408307 -144279547 - L1PA13 LINE L1 -332 5831 5767 533 288 7 13 chr2 106409194 106409347 -144278507 + MIR SINE MIR 101 252 -10 207 297 0 31 chr2 106409440 106409504 -144278350 + L3 LINE CR1 1509 1570 -7 221 418 37 30 chr2 106409518 106409652 -144278202 + L2 LINE L2 3125 3259 -13 23 0 0 0 chr2 106409728 106409751 -144278103 + AT_rich Low_complexity Low_complexity 1 23 0 457 279 43 12 chr2 106409792 106409953 -144277901 - MIR SINE MIR -51 211 46 721 185 125 17 chr2 106410525 106410757 -144277097 + Charlie1 DNA MER1_type 2500 2756 -5 282 258 61 0 chr2 106411125 106411191 -144276663 + MIR SINE MIR 51 120 -142 254 243 57 0 chr2 106412032 106412102 -144275752 + L2 LINE L2 3190 3263 -9 462 202 10 10 chr2 106412297 106412401 -144275453 - L1MC/D LINE L1 -669 5967 5864 * 1362 254 8 28 chr2 106412385 106412744 -144275110 - L1MC/D LINE L1 -1767 4773 4422 * 4200 235 42 46 chr2 106412739 106412952 -144274902 - L1MC/D LINE L1 -2465 4075 3863 2377 110 0 0 chr2 106412952 106413260 -144274594 - AluSx SINE Alu -4 308 1 4200 235 42 46 chr2 106413260 106413966 -144273888 - L1MC/D LINE L1 -2677 3863 3156 1798 162 25 4 chr2 106413966 106414271 -144273583 - AluSx SINE Alu 0 311 1 4200 235 42 46 chr2 106414271 106414680 -144273174 - L1MC/D LINE L1 -3384 3156 2747 2187 106 3 3 chr2 106414680 106415002 -144272852 + AluSp SINE Alu 1 322 0 4200 235 42 46 chr2 106415002 106415084 -144272770 - L1MC/D LINE L1 -3793 2747 2666 791 223 46 35 chr2 106415075 106415272 -144272582 - L1MC/D LINE L1 -6192 348 150 * 245 295 141 32 chr2 106416143 106416299 -144271555 - MIR SINE MIR -29 233 61 2231 97 0 7 chr2 106416981 106417280 -144270574 + AluSq SINE Alu 1 297 -16 1983 118 52 0 chr2 106419115 106419433 -144268421 + AluSx SINE Alu 1 332 0 4107 98 44 108 chr2 106419917 106420756 -144267098 + LTR1 LTR ERV1 1 785 0 503 308 62 40 chr2 106420868 106421092 -144266762 + MIR SINE MIR 13 241 -21 2777 243 81 92 chr2 106421574 106422394 -144265460 + HAL1 LINE L1 829 1623 -884 2920 101 5 8 chr2 106422394 106422789 -144265065 + L1PA10 LINE L1 5770 6163 -5 2777 243 81 92 chr2 106422789 106423620 -144264234 + HAL1 LINE L1 1623 2462 -45 214 369 151 7 chr2 106423980 106424251 -144263603 + L3 LINE CR1 1012 1321 -256 242 304 191 20 chr2 106424252 106424456 -144263398 + L2 LINE L2 3007 3245 -27 224 236 55 18 chr2 106424595 106424650 -144263204 + L3 LINE CR1 1500 1556 -21 347 269 39 0 chr2 106425116 106425220 -144262634 - MER91C DNA MER1_type -32 108 1 465 169 8 24 chr2 106425442 106425566 -144262288 + CT-rich Low_complexity Low_complexity 1 122 0 905 78 0 58 chr2 106425567 106425758 -144262096 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1933 148 0 0 chr2 106425777 106426054 -144261800 - AluSx SINE Alu -35 277 1 741 253 83 32 chr2 106427929 106428182 -144259672 - Charlie8 DNA MER1_type -2141 276 11 212 293 151 28 chr2 106428343 106428449 -144259405 - MIR3 SINE MIR -75 133 15 505 182 265 0 chr2 106428866 106428998 -144258856 + MER5B DNA MER1_type 7 173 -5 679 203 122 0 chr2 106429042 106429190 -144258664 - MER45A DNA AcHobo 0 178 13 1378 194 67 14 chr2 106429480 106429764 -144258090 + AluJb SINE Alu 1 299 -13 394 250 20 0 chr2 106429789 106429889 -144257965 - L1ME3 LINE L1 -148 6014 5913 2167 182 55 11 chr2 106429894 106430327 -144257527 - LTR32 LTR ERVL -5 466 15 250 213 0 0 chr2 106430387 106430434 -144257420 - L1ME3 LINE L1 -1217 4929 4883 * 6832 281 76 37 chr2 106430430 106431771 -144256083 - L1ME3 LINE L1 -318 5913 4626 2126 120 3 10 chr2 106431771 106432072 -144255782 + AluSx SINE Alu 1 299 -13 6832 281 76 37 chr2 106432072 106435414 -144252440 - L1ME3 LINE L1 -1605 4626 1089 2126 146 0 0 chr2 106436630 106436931 -144250923 + AluSx SINE Alu 1 301 -11 287 247 0 67 chr2 106437495 106437549 -144250305 + MER5A DNA MER1_type 22 69 -120 2226 108 10 0 chr2 106437549 106437846 -144250008 + AluSx SINE Alu 1 300 -12 287 247 0 67 chr2 106437846 106437880 -144249974 + MER5A DNA MER1_type 69 104 -85 325 250 0 0 chr2 106437988 106438056 -144249798 - MIR SINE MIR -74 188 121 2375 137 57 8 chr2 106438324 106438696 -144249158 + MLT1B LTR MaLR 1 390 0 257 213 49 0 chr2 106439618 106439679 -144248175 + MIR SINE MIR 82 145 -63 3181 163 99 25 chr2 106440343 106441032 -144246822 + L1MB4 LINE L1 5440 6179 -1 2209 92 3 13 chr2 106442110 106442424 -144245430 + AluY SINE Alu 1 311 0 577 251 76 6 chr2 106442709 106442874 -144244980 + MIR SINE MIR 3 192 -63 405 279 181 18 chr2 106443756 106443982 -144243872 - LTR33 LTR ERVL -5 516 254 1702 135 10 33 chr2 106444003 106444306 -144243548 + AluSx SINE Alu 1 296 -16 324 140 53 153 chr2 106444306 106444446 -144243408 - L1MCa LINE L1 -4373 2053 1927 194 54 0 54 chr2 106444452 106444489 -144243365 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 255 225 28 14 chr2 106444667 106444738 -144243116 - L1ME LINE L1 -339 5782 5711 260 293 47 0 chr2 106445711 106445817 -144242037 + Charlie8 DNA MER1_type 111 221 -2196 1098 280 129 23 chr2 106446213 106446523 -144241331 + L2 LINE L2 1329 1605 -1709 4360 108 11 13 chr2 106446523 106447159 -144240695 - MER41B LTR ERV1 0 635 1 1098 280 129 23 chr2 106447159 106447505 -144240349 + L2 LINE L2 1605 2055 -1259 751 239 129 66 chr2 106447740 106448150 -144239704 - MLT1C LTR MaLR -26 441 6 1087 206 17 34 chr2 106449083 106449155 -144238699 - MER119 DNA MER1_type -18 565 493 2331 68 0 0 chr2 106449155 106449450 -144238404 - AluY SINE Alu -16 295 1 1087 206 17 34 chr2 106449450 106449668 -144238186 - MER119 DNA MER1_type -90 493 280 1927 170 28 53 chr2 106449668 106449835 -144238019 + MLT1B LTR MaLR 1 171 -219 2035 116 0 0 chr2 106449835 106450120 -144237734 + AluSx SINE Alu 1 285 -27 186 43 0 0 chr2 106450123 106450146 -144237708 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1927 170 28 53 chr2 106450146 106450211 -144237643 + MLT1B LTR MaLR 173 238 -152 841 249 132 67 chr2 106450211 106450720 -144237134 - MER34 LTR ERV1 0 542 1 1927 170 28 53 chr2 106450720 106450881 -144236973 + MLT1B LTR MaLR 238 389 -1 2069 126 3 0 chr2 106450894 106451196 -144236658 - AluSx SINE Alu -9 303 1 505 306 64 6 chr2 106451261 106451418 -144236436 - MER119 DNA MER1_type -417 166 1 2797 3 0 0 chr2 106452093 106452403 -144235451 + AluYa5 SINE Alu 1 310 -1 340 277 101 0 chr2 106452412 106452531 -144235323 + L1ME4a LINE L1 5849 5979 -142 1594 173 180 14 chr2 106452534 106452950 -144234904 - LTR54B LTR ERV1 -13 485 1 230 279 0 0 chr2 106452950 106453018 -144234836 + L1ME4a LINE L1 5977 6044 -77 1908 138 3 13 chr2 106453219 106453524 -144234330 - AluJo SINE Alu -6 306 5 235 250 83 0 chr2 106454133 106454205 -144233649 - Charlie8 DNA MER1_type 0 2417 2340 1399 187 0 73 chr2 106455396 106455696 -144232158 - AluJo SINE Alu -11 301 24 2045 145 38 41 chr2 106455815 106455976 -144231878 + MLT1A1 LTR MaLR 1 161 -204 2325 63 0 7 chr2 106455976 106456276 -144231578 - AluY SINE Alu -13 298 1 2045 145 38 41 chr2 106456276 106456480 -144231374 + MLT1A1 LTR MaLR 161 365 0 246 62 0 0 chr2 106457638 106457670 -144230184 + (TA)n Simple_repeat Simple_repeat 2 33 0 234 259 0 0 chr2 106458730 106458784 -144229070 + (CA)n Simple_repeat Simple_repeat 2 55 0 294 206 29 0 chr2 106458838 106458906 -144228948 + MLT1C LTR MaLR 27 96 -269 180 300 17 17 chr2 106459808 106459868 -144227986 - MIR SINE MIR -107 101 42 949 214 35 50 chr2 106460321 106460670 -144227184 + MLT1C LTR MaLR 68 467 0 2973 122 32 97 chr2 106460892 106461449 -144226405 + LTR26B LTR ERV1 1 521 -10 205 329 14 0 chr2 106462141 106462211 -144225643 - MIR SINE MIR -114 148 78 2044 189 10 5 chr2 106462645 106463036 -144224818 + MLT2C1 LTR ERVL 3 395 -2 1100 265 112 3 chr2 106463553 106463847 -144224007 + MER58B DNA MER1_type 1 326 -15 23 68 0 0 chr2 106464908 106464952 -144222902 + AT_rich Low_complexity Low_complexity 1 44 0 195 169 119 34 chr2 106465314 106465373 -144222481 + L2 LINE L2 3209 3272 0 929 257 37 12 chr2 106466668 106466909 -144220945 + MER34 LTR ERV1 13 259 -283 2129 108 0 3 chr2 106466910 106467207 -144220647 + AluSx SINE Alu 1 296 -16 1051 149 58 0 chr2 106467261 106467449 -144220405 + MER34 LTR ERV1 344 542 0 196 284 296 11 chr2 106467554 106467642 -144220212 - MER5B DNA MER1_type -59 119 7 372 216 32 27 chr2 106467651 106467764 -144220090 - MIR SINE MIR -60 148 34 666 284 73 48 chr2 106467947 106468302 -144219552 - LTR33 LTR ERVL -157 364 1 226 286 137 12 chr2 106468864 106469025 -144218829 - MIR SINE MIR -66 196 16 192 343 14 0 chr2 106469060 106469133 -144218721 + MIR SINE MIR 187 260 -2 30 27 0 0 chr2 106470325 106470362 -144217492 + AT_rich Low_complexity Low_complexity 1 37 0 2152 87 0 17 chr2 106471423 106471721 -144216133 - AluSq SINE Alu -20 293 1 2277 103 42 17 chr2 106471995 106472536 -144215318 - LTR10E LTR ERV1 -21 612 1 1414 212 4 4 chr2 106472699 106472954 -144214900 - Harlequin LTR ERV1 -2943 3953 3699 324 150 40 35 chr2 106472954 106473055 -144214799 + Alu SINE Alu 246 299 -2 24 0 0 0 chr2 106473055 106473079 -144214775 + AT_rich Low_complexity Low_complexity 1 24 0 400 291 50 6 chr2 106473272 106473454 -144214400 - L1MC4a LINE L1 -1906 5902 5713 219 313 73 0 chr2 106473492 106473588 -144214266 + L2 LINE L2 2594 2696 -618 362 193 82 131 chr2 106473589 106473798 -144214056 - L1M4 LINE L1 -1200 4946 4759 216 67 0 0 chr2 106473798 106473828 -144214026 + (TCCA)n Simple_repeat Simple_repeat 4 33 0 362 193 82 131 chr2 106473828 106473970 -144213884 - L1M4 LINE L1 -1387 4759 4612 691 235 25 84 chr2 106473996 106474319 -144213535 - L1M4 LINE L1 -1526 4620 4317 1341 226 29 100 chr2 106474319 106474733 -144213121 + L1M4 LINE L1 3938 4309 -1837 2230 91 3 3 chr2 106474733 106475040 -144212814 - AluY SINE Alu -4 307 1 1341 226 29 100 chr2 106475040 106475147 -144212707 + L1M4 LINE L1 4309 4422 -1724 472 218 10 20 chr2 106475147 106475248 -144212606 + MLT1A2 LTR MaLR 229 328 -46 875 230 68 56 chr2 106475248 106475793 -144212061 + L1M4 LINE L1 4399 5113 -1033 1809 133 3 35 chr2 106475793 106476109 -144211745 + AluSq SINE Alu 5 310 -3 875 230 68 56 chr2 106476109 106476393 -144211461 + L1M4 LINE L1 5113 5392 -754 347 171 22 18 chr2 106476375 106476487 -144211367 + L1ME LINE L1 5327 5434 -717 * 745 247 0 0 chr2 106476487 106476633 -144211221 - MER45 DNA AcHobo -1432 149 4 2245 110 0 0 chr2 106477110 106477420 -144210434 - AluSg SINE Alu 0 310 1 25 31 0 0 chr2 106477973 106478005 -144209849 + AT_rich Low_complexity Low_complexity 1 32 0 1912 132 0 7 chr2 106478006 106478295 -144209559 - AluSx SINE Alu -25 287 1 415 310 49 0 chr2 106480547 106480689 -144207165 + MER103 DNA DNA 11 159 -7 251 283 100 33 chr2 106480976 106481096 -144206758 + MIR SINE MIR 22 149 -113 182 350 17 0 chr2 106481114 106481174 -144206680 - L2 LINE L2 -16 3297 3237 180 368 21 21 chr2 106482020 106482115 -144205739 - MIR3 SINE MIR -54 154 60 437 241 252 27 chr2 106482163 106482536 -144205318 - LTR33 LTR ERVL -20 501 45 2155 221 82 50 chr2 106482560 106482955 -144204899 + LTR65 LTR ERV1 1 382 -287 2193 119 44 36 chr2 106482955 106483316 -144204538 - THE1B LTR MaLR 0 364 1 2155 221 82 50 chr2 106483316 106483433 -144204421 + LTR65 LTR ERV1 382 494 -175 1841 132 3 7 chr2 106483433 106483721 -144204133 - AluJo SINE Alu -9 303 17 2155 221 82 50 chr2 106483721 106483853 -144204001 + LTR65 LTR ERV1 494 667 -2 2221 200 24 2 chr2 106485181 106485641 -144202213 - L1MB3 LINE L1 -3 6180 5711 813 204 25 60 chr2 106487130 106487291 -144200563 - MER20 DNA MER1_type -3 216 62 1907 141 3 3 chr2 106487291 106487596 -144200258 + AluJb SINE Alu 1 305 -7 813 204 25 60 chr2 106487596 106487635 -144200219 - MER20 DNA MER1_type -157 62 23 782 243 64 18 chr2 106487637 106487855 -144199999 - MIR SINE MIR -11 251 24 348 223 99 50 chr2 106487911 106488032 -144199822 - MIR SINE MIR -118 144 18 262 311 78 0 chr2 106488380 106488483 -144199371 + MIR SINE MIR 34 144 -118 207 0 0 0 chr2 106488662 106488685 -144199169 + (T)n Simple_repeat Simple_repeat 1 23 0 2298 192 65 16 chr2 106489875 106490365 -144197489 + MLT2B1 LTR ERVL 7 520 0 1919 109 25 7 chr2 106490650 106490935 -144196919 - AluSx SINE Alu 0 312 23 366 255 21 0 chr2 106490937 106491031 -144196823 - MER5B DNA MER1_type -74 104 9 * 411 321 89 21 chr2 106491010 106491200 -144196654 + MIR SINE MIR 7 209 -53 319 275 123 14 chr2 106491978 106492116 -144195738 + L2 LINE L2 3161 3313 0 2059 90 7 3 chr2 106492170 106492458 -144195396 + AluSc SINE Alu 7 295 -14 914 200 32 21 chr2 106493314 106493504 -144194350 + MER3 DNA MER1_type 1 192 -17 186 133 0 0 chr2 106493855 106493885 -144193969 + (T)n Simple_repeat Simple_repeat 1 30 0 1979 150 0 0 chr2 106493887 106494193 -144193661 - AluSx SINE Alu 0 312 7 582 278 43 12 chr2 106494304 106494466 -144193388 - MER5B DNA MER1_type -5 173 7 811 290 154 48 chr2 106494628 106495682 -144192172 + L2 LINE L2 2111 3273 -40 2249 164 26 39 chr2 106495773 106496230 -144191624 - L1MB3 LINE L1 -2 6181 5731 429 206 29 10 chr2 106497125 106497227 -144190627 + MER5C DNA MER1_type 5 108 -216 294 297 55 23 chr2 106497807 106497935 -144189919 - MIR SINE MIR -3 259 128 1504 188 48 64 chr2 106498006 106498424 -144189430 + MLT1C LTR MaLR 34 349 -25 331 275 63 42 chr2 106498486 106498628 -144189226 + MLT1K LTR MaLR 151 295 -293 274 193 165 28 chr2 106498673 106498782 -144189072 + MLT1K LTR MaLR 452 575 -13 341 250 61 92 chr2 106499723 106499951 -144187903 - MLT1L LTR MaLR -8 607 387 732 249 34 15 chr2 106500328 106500542 -144187312 - MLT1L LTR MaLR -27 561 339 242 161 0 18 chr2 106500585 106500641 -144187213 + GA-rich Low_complexity Low_complexity 2 56 0 364 244 23 0 chr2 106500709 106500795 -144187059 - MER46C DNA MER2_type -8 330 243 216 262 64 58 chr2 106501544 106501716 -144186138 - MIR3 SINE MIR -15 193 21 463 126 35 0 chr2 106501963 106502050 -144185804 - L1MA4A LINE L1 -3 6300 6211 1961 75 0 0 chr2 106502081 106502333 -144185521 - AluY SINE Alu 0 311 60 3123 146 4 0 chr2 106502364 106502851 -144185003 - L1PA16 LINE L1 -21 6145 5657 850 146 7 0 chr2 106502850 106502994 -144184860 + L1MA4A LINE L1 6056 6200 -103 * 231 226 0 0 chr2 106503978 106504031 -144183823 + T-rich Low_complexity Low_complexity 1 53 0 600 250 43 16 chr2 106504846 106505030 -144182824 - MER5A DNA MER1_type 0 189 1 1239 218 65 107 chr2 106505160 106505702 -144182152 - LTR40a LTR ERVL 0 519 1 325 111 125 97 chr2 106505760 106505832 -144182022 + MLT1D LTR MaLR 3 76 -429 1612 199 50 76 chr2 106505836 106506130 -144181724 - MLT1C LTR MaLR -2 465 184 1552 168 7 34 chr2 106506130 106506427 -144181427 + AluJo SINE Alu 1 289 -23 1612 199 50 76 chr2 106506427 106506568 -144181286 - MLT1C LTR MaLR -283 184 41 1541 213 45 16 chr2 106506650 106507030 -144180824 + MLT1D LTR MaLR 113 503 -2 201 39 0 0 chr2 106507911 106507937 -144179917 + (CA)n Simple_repeat Simple_repeat 2 27 0 443 210 30 0 chr2 106509048 106509148 -144178706 - MER96B DNA MER1_type? -182 235 133 458 258 155 71 chr2 106509164 106509416 -144178438 + HAL1 LINE L1 101 373 -2134 310 214 83 0 chr2 106509424 106509508 -144178346 + HAL1 LINE L1 433 523 -1984 1645 308 107 74 chr2 106509572 106510108 -144177746 + HAL1 LINE L1 614 1131 -1376 2142 108 13 10 chr2 106510108 106510415 -144177439 + AluSq SINE Alu 1 308 -5 1645 308 107 74 chr2 106510415 106510589 -144177265 + HAL1 LINE L1 1131 1298 -1209 1990 128 3 3 chr2 106510589 106510887 -144176967 + AluJb SINE Alu 1 298 -14 1645 308 107 74 chr2 106510887 106511113 -144176741 + HAL1 LINE L1 1298 1515 -992 8093 7 0 3 chr2 106511113 106512177 -144175677 - L1PA2 LINE L1 -1 6154 5099 1645 308 107 74 chr2 106512177 106513071 -144174783 + HAL1 LINE L1 1515 2507 0 234 259 47 47 chr2 106513928 106514098 -144173756 + LTR33 LTR ERVL 1 170 -351 653 235 122 15 chr2 106514154 106514350 -144173504 + LTR33 LTR ERVL 302 518 -3 337 341 81 0 chr2 106514408 106514531 -144173323 + L2 LINE L2 3180 3312 -1 286 233 58 10 chr2 106514828 106514931 -144172923 - MLT1L LTR MaLR -2 613 506 309 234 100 87 chr2 106514984 106515177 -144172677 - MLT1L LTR MaLR -235 380 191 1965 139 7 0 chr2 106515177 106515479 -144172375 - AluSx SINE Alu -8 304 1 309 234 100 87 chr2 106515479 106515527 -144172327 - MLT1L LTR MaLR -424 191 145 1660 161 29 83 chr2 106515527 106515913 -144171941 + MLT1A1 LTR MaLR 1 365 0 309 234 100 87 chr2 106515913 106515976 -144171878 - MLT1L LTR MaLR -470 145 1 205 204 68 0 chr2 106516446 106516490 -144171364 - MIR SINE MIR -124 84 38 472 268 26 11 chr2 106516614 106516897 -144170957 + L1MC4a LINE L1 5565 5684 -480 590 236 123 10 chr2 106517868 106518189 -144169665 - MER69 DNA AcHobo -62 2464 2083 611 288 11 11 chr2 106518206 106518383 -144169471 - MER69 DNA AcHobo -389 837 661 251 316 13 0 chr2 106518392 106518471 -144169383 - MER69 DNA AcHobo -486 740 661 183 293 211 14 chr2 106520619 106520766 -144167088 + MIR3 SINE MIR 22 197 -11 1184 114 47 5 chr2 106521493 106521686 -144166168 - MSTB LTR MaLR -222 204 4 310 245 273 7 chr2 106521968 106522111 -144165743 - MER5A DNA MER1_type 0 189 9 304 303 13 0 chr2 106522245 106522321 -144165533 + L2 LINE L2 3196 3272 0 219 36 0 0 chr2 106524952 106524980 -144162874 + (T)n Simple_repeat Simple_repeat 1 28 0 24 53 0 0 chr2 106525212 106525250 -144162604 + AT_rich Low_complexity Low_complexity 1 38 0 200 283 0 0 chr2 106525412 106525458 -144162396 + L2 LINE L2 3214 3259 -13 2146 105 3 0 chr2 106525719 106526024 -144161830 - AluSq SINE Alu -7 306 1 2211 161 59 23 chr2 106526538 106526980 -144160874 + L1MA8 LINE L1 5828 6285 -6 1979 112 3 3 chr2 106527095 106527381 -144160473 + AluSx SINE Alu 1 286 -26 234 0 0 0 chr2 106527385 106527411 -144160443 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 35 24 0 0 chr2 106527425 106527467 -144160387 + AT_rich Low_complexity Low_complexity 1 42 0 225 146 0 0 chr2 106530163 106530211 -144157643 + (T)n Simple_repeat Simple_repeat 1 48 0 207 111 0 28 chr2 106530384 106530420 -144157434 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 348 340 33 20 chr2 106530442 106530592 -144157262 + MIR3 SINE MIR 47 198 -10 6065 128 6 16 chr2 106532009 106532941 -144154913 - MER49 LTR ERV1 0 923 1 186 43 0 0 chr2 106533039 106533062 -144154792 + (CATA)n Simple_repeat Simple_repeat 4 26 0 482 274 0 0 chr2 106533176 106533289 -144154565 - MER63B DNA MER1_type 0 434 322 1646 123 31 19 chr2 106533289 106533549 -144154305 + L1MC1 LINE L1 5622 5884 -449 2098 102 6 19 chr2 106533555 106534012 -144153842 + AluSc SINE Alu 1 453 0 2465 158 22 9 chr2 106534012 106534462 -144153392 + L1MC1 LINE L1 5878 6333 0 1026 210 65 34 chr2 106534462 106534753 -144153101 - MER63B DNA MER1_type -111 325 26 981 220 0 18 chr2 106534778 106534996 -144152858 - AluJo SINE Alu -25 287 74 548 285 0 83 chr2 106535859 106536052 -144151802 - MER5B DNA MER1_type 0 178 2 1817 144 7 0 chr2 106536963 106537254 -144150600 + AluSx SINE Alu 1 293 -19 1660 143 0 67 chr2 106537493 106537808 -144150046 - AluJo SINE Alu -18 294 1 739 303 110 35 chr2 106537825 106538489 -144149365 + L1ME3A LINE L1 5175 5897 -273 21 0 0 0 chr2 106538984 106539005 -144148849 + AT_rich Low_complexity Low_complexity 1 21 0 2084 127 0 3 chr2 106539145 106539453 -144148401 + AluSx SINE Alu 1 307 -5 1824 153 3 17 chr2 106540319 106540614 -144147240 - AluJb SINE Alu 0 312 22 279 0 0 0 chr2 106542736 106542767 -144145087 + (CAA)n Simple_repeat Simple_repeat 2 32 0 186 319 56 0 chr2 106543973 106544045 -144143809 + MIR SINE MIR 150 225 -37 820 293 108 55 chr2 106544120 106544554 -144143300 + LTR16A LTR ERVL 1 450 0 282 282 0 13 chr2 106544749 106544827 -144143027 + HAL1 LINE L1 8 84 -2423 180 0 0 0 chr2 106547040 106547060 -144140794 + (T)n Simple_repeat Simple_repeat 1 20 0 273 269 0 13 chr2 106547746 106547824 -144140030 - MER5B DNA MER1_type 0 178 102 * 774 181 28 0 chr2 106547822 106547966 -144139888 + MER5A DNA MER1_type 38 185 -4 246 221 186 0 chr2 106547969 106548055 -144139799 + MER5B DNA MER1_type 69 170 -8 1632 261 117 27 chr2 106548170 106548690 -144139164 - MER74B LTR ERVL 0 622 56 222 248 144 80 chr2 106548751 106548876 -144138978 + MIR SINE MIR 119 251 -11 2205 119 0 10 chr2 106548975 106549277 -144138577 + AluSx SINE Alu 1 299 -13 2097 138 3 6 chr2 106549281 106549633 -144138221 + AluSx SINE Alu 1 351 0 2178 154 66 88 chr2 106550529 106551042 -144136812 - MLT1D LTR MaLR 0 505 4 186 244 226 35 chr2 106552177 106552292 -144135562 - MIR SINE MIR -12 250 114 183 277 143 45 chr2 106552794 106552906 -144134948 - L3 LINE CR1 -51 1526 1404 2366 179 79 7 chr2 106553020 106553478 -144134376 - MLT1D LTR MaLR 0 505 15 290 111 22 0 chr2 106553466 106553511 -144134343 + THE1B LTR MaLR 281 326 -38 * 328 260 0 0 chr2 106554538 106554615 -144133239 - MSTA LTR MaLR 0 428 352 240 35 0 0 chr2 106554798 106554827 -144133027 + (G)n Simple_repeat Simple_repeat 1 29 0 2834 121 12 2 chr2 106555144 106555574 -144132280 - MER57B LTR ERV1 0 434 1 2919 194 39 32 chr2 106556252 106556901 -144130953 - MER82 DNA MER2_type 0 653 1 358 319 21 0 chr2 106558130 106558274 -144129580 + L1ME4a LINE L1 5690 5836 -285 540 318 60 39 chr2 106558275 106558299 -144129555 + L1ME3A LINE L1 5414 5436 -734 439 155 0 0 chr2 106558299 106558383 -144129471 + L1MA4 LINE L1 6214 6297 -3 540 318 60 39 chr2 106558383 106558874 -144128980 + L1ME3A LINE L1 5436 5940 -230 365 245 158 57 chr2 106561410 106561675 -144126179 + LTR16C LTR ERVL 200 491 0 1499 193 7 27 chr2 106563713 106564046 -144123808 - AluSx SINE Alu 0 312 1 1922 144 4 0 chr2 106564273 106564551 -144123303 + AluSx SINE Alu 1 279 -33 210 37 0 0 chr2 106564552 106564579 -144123275 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 626 298 19 5 chr2 106564834 106565042 -144122812 + L1ME4a LINE L1 5552 5762 -359 240 264 38 0 chr2 106565043 106565149 -144122705 + (TA)n Simple_repeat Simple_repeat 2 111 0 335 260 142 21 chr2 106565149 106565437 -144122417 + L1ME4a LINE L1 5797 6119 -2 360 111 0 0 chr2 106565477 106565531 -144122323 + (CA)n Simple_repeat Simple_repeat 1 54 0 693 304 108 16 chr2 106566578 106567005 -144120849 + L3 LINE CR1 899 1364 -213 1062 118 0 18 chr2 106567199 106567368 -144120486 - L1PA10 LINE L1 0 6168 6003 254 286 83 23 chr2 106567368 106567501 -144120353 - MIR3 SINE MIR -28 180 40 493 206 32 16 chr2 106572156 106572282 -144115572 - MER5A DNA MER1_type -53 136 9 516 253 25 19 chr2 106572308 106572470 -144115384 + MIR SINE MIR 30 192 -70 427 279 84 13 chr2 106572794 106572948 -144114906 + MIR3 SINE MIR 36 200 -8 2070 112 34 3 chr2 106573472 106573766 -144114088 + AluSq SINE Alu 2 304 -9 3290 155 14 0 chr2 106574453 106575014 -144112840 + L1MC1 LINE L1 5764 6332 -1 1945 138 7 24 chr2 106575024 106575320 -144112534 + AluSx SINE Alu 1 291 -21 544 267 47 6 chr2 106575333 106575505 -144112349 - MIR SINE MIR -3 259 81 252 0 0 0 chr2 106575538 106575566 -144112288 + (T)n Simple_repeat Simple_repeat 1 28 0 3770 98 8 19 chr2 106575946 106576479 -144111375 - MER1A DNA MER1_type 0 527 1 1988 156 0 3 chr2 106576848 106577150 -144110704 + AluJb SINE Alu 1 301 -11 1845 125 30 37 chr2 106578787 106579084 -144108770 - AluJo SINE Alu -4 308 14 2134 125 0 24 chr2 106579377 106579674 -144108180 + AluSx SINE Alu 2 291 -21 22 0 0 0 chr2 106580352 106580374 -144107480 + AT_rich Low_complexity Low_complexity 1 22 0 1064 79 23 27 chr2 106581131 106581636 -144106218 + (TTTC)n Simple_repeat Simple_repeat 2 538 0 2219 116 10 13 chr2 106581636 106581947 -144105907 - AluSx SINE Alu 0 815 1 395 329 13 19 chr2 106581947 106582102 -144105752 + MIR3 SINE MIR 42 195 -13 6773 190 18 19 chr2 106582518 106583996 -144103858 + L1MB2 LINE L1 3773 5254 -917 2053 142 35 35 chr2 106583996 106584370 -144103484 - THE1C LTR MaLR -1 374 1 6773 190 18 19 chr2 106584370 106585084 -144102770 + L1MB2 LINE L1 5254 5968 -203 6628 255 89 48 chr2 106585579 106586217 -144101637 - L1ME1 LINE L1 -231 5869 5259 441 0 0 0 chr2 106586217 106586266 -144101588 + (TA)n Simple_repeat Simple_repeat 2 50 0 6628 255 89 48 chr2 106586266 106589635 -144098219 - L1ME1 LINE L1 -841 5259 2030 2282 105 3 0 chr2 106589635 106589930 -144097924 + AluSp SINE Alu 1 296 -17 207 0 0 0 chr2 106589930 106589953 -144097901 + (TA)n Simple_repeat Simple_repeat 2 24 0 6628 255 89 48 chr2 106589953 106590986 -144096868 - L1ME1 LINE L1 -4069 2031 560 693 268 97 86 chr2 106591188 106591691 -144096163 - L1ME1 LINE L1 -5549 521 13 1248 206 50 16 chr2 106591927 106592423 -144095431 - MLT1E3 LTR MaLR 0 624 1 355 219 24 0 chr2 106592424 106592506 -144095348 + L1MC/D LINE L1 5694 5777 -2031 2638 55 0 0 chr2 106592873 106593184 -144094670 - AluY SINE Alu 0 311 1 2364 201 40 28 chr2 106593727 106594213 -144093641 - MER89 LTR ERV1 -9 550 72 297 0 0 0 chr2 106594213 106594246 -144093608 + (TA)n Simple_repeat Simple_repeat 2 34 0 2286 88 10 0 chr2 106594246 106594552 -144093302 - AluY SINE Alu -2 309 1 2364 201 40 28 chr2 106594552 106594607 -144093247 - MER89 LTR ERV1 -486 73 1 249 279 116 39 chr2 106596106 106596235 -144091619 + MER5A DNA MER1_type 45 183 -6 2593 48 0 0 chr2 106596942 106597235 -144090619 - AluY SINE Alu -18 293 1 2441 94 0 0 chr2 106598085 106598383 -144089471 - AluSg SINE Alu -11 299 2 233 280 40 0 chr2 106598523 106598598 -144089256 - MLT1L LTR MaLR -537 78 1 1360 113 29 84 chr2 106598763 106598912 -144088942 + MER30 DNA MER1_type 6 139 -91 2390 97 0 0 chr2 106598912 106599212 -144088642 + AluSc SINE Alu 1 300 -9 1360 113 29 84 chr2 106599212 106599300 -144088554 + MER30 DNA MER1_type 139 230 0 321 68 0 0 chr2 106600065 106600109 -144087745 + (TG)n Simple_repeat Simple_repeat 1 44 0 411 146 118 64 chr2 106601565 106601675 -144086179 + FLAM_A SINE Alu 26 141 -1 722 50 8 34 chr2 106601875 106601994 -144085860 + (TTTC)n Simple_repeat Simple_repeat 3 118 0 1268 171 0 5 chr2 106601994 106602204 -144085650 - AluJo SINE Alu -32 280 72 652 168 0 0 chr2 106602239 106602346 -144085508 - FLAM_C SINE Alu -35 108 2 395 222 151 0 chr2 106602598 106602723 -144085131 - LTR16C LTR ERVL 0 491 348 1607 193 48 31 chr2 106602723 106603076 -144084778 + MLT1A2 LTR MaLR 1 359 -15 397 294 173 22 chr2 106603078 106603391 -144084463 - LTR16C LTR ERVL -128 363 4 209 300 27 0 chr2 106603643 106603753 -144084101 + L2 LINE L2 2947 3059 -213 1026 279 66 13 chr2 106604516 106604893 -144082961 + LTR16C LTR ERVL 85 481 -10 779 248 81 47 chr2 106605391 106606078 -144081776 - L2 LINE L2 -1 3312 2525 252 312 0 88 chr2 106606177 106606347 -144081507 + MIR3 SINE MIR 24 178 -30 729 169 0 32 chr2 106606450 106606604 -144081250 + L1MA4 LINE L1 3355 3503 -2643 1898 144 3 33 chr2 106606609 106606914 -144080940 + AluSx SINE Alu 1 296 -16 1819 143 36 133 chr2 106607457 106607877 -144079977 - MER47B DNA MER2_type -20 398 20 622 277 39 19 chr2 106607930 106608190 -144079664 - MER46C DNA MER2_type -5 333 69 441 232 74 69 chr2 106608383 106608734 -144079120 + LTR31 LTR ERV1 266 489 0 364 271 105 30 chr2 106608763 106608896 -144078958 - MIR SINE MIR -114 148 6 26 0 0 0 chr2 106609134 106609160 -144078694 + AT_rich Low_complexity Low_complexity 1 26 0 2026 141 14 20 chr2 106609387 106609741 -144078113 + L1MA9 LINE L1 5956 6307 -5 6393 149 8 22 chr2 106609778 106610249 -144077605 + L1MA4 LINE L1 4802 5278 -1022 2173 114 0 0 chr2 106610249 106610554 -144077300 + AluSx SINE Alu 1 305 0 6393 149 8 22 chr2 106610554 106611595 -144076259 + L1MA4 LINE L1 5278 6293 -7 453 163 22 0 chr2 106611651 106611743 -144076111 - Charlie2a DNA MER1_type -1921 941 848 2870 51 3 0 chr2 106612028 106612380 -144075474 + L1PA6 LINE L1 5800 6152 -2 2241 118 0 0 chr2 106612910 106613216 -144074638 + AluSx SINE Alu 1 306 -6 2289 97 7 3 chr2 106613255 106613565 -144074289 - AluY SINE Alu 0 311 1 881 203 138 24 chr2 106613568 106613990 -144073864 + Charlie2 DNA MER1_type 2251 2770 -92 234 143 14 29 chr2 106614584 106614654 -144073200 + (TG)n Simple_repeat Simple_repeat 2 70 0 369 239 49 12 chr2 106614669 106614832 -144073022 + (TG)n Simple_repeat Simple_repeat 2 170 0 414 161 27 0 chr2 106614863 106614975 -144072879 + (TG)n Simple_repeat Simple_repeat 2 116 0 854 175 6 0 chr2 106615186 106615363 -144072491 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 687 227 88 101 chr2 106616942 106617338 -144070516 - L2 LINE L2 -3 3310 2920 354 268 0 27 chr2 106617353 106617465 -144070389 - L2 LINE L2 -2328 986 878 225 0 0 0 chr2 106618780 106618805 -144069049 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 398 160 0 53 chr2 106620762 106620837 -144067017 - AluSx SINE Alu -1 300 230 1170 124 0 40 chr2 106620837 106621014 -144066840 - AluSx SINE Alu -142 170 1 598 256 129 50 chr2 106621197 106621638 -144066216 - LTR33 LTR ERVL -22 499 24 284 345 124 0 chr2 106621819 106622094 -144065760 - L3 LINE CR1 -6 1571 1263 1784 124 130 34 chr2 106622503 106622825 -144065029 - MLT1B LTR MaLR -37 353 1 406 374 24 12 chr2 106622861 106623107 -144064747 - L3 LINE CR1 -67 1510 1262 515 296 82 11 chr2 106623873 106624140 -144063714 + LTR33 LTR ERVL 1 286 -235 292 261 57 10 chr2 106624419 106624531 -144063323 - MER5B DNA MER1_type -7 171 65 285 203 31 0 chr2 106624596 106624660 -144063194 + MER5B DNA MER1_type 113 178 0 604 226 0 101 chr2 106625666 106625865 -144061989 - MER104 DNA MER2_type -1 179 1 1761 113 117 0 chr2 106626376 106626632 -144061222 - AluSg SINE Alu -14 296 11 385 265 153 6 chr2 106627033 106627203 -144060651 + MIR SINE MIR 1 195 -67 286 309 10 21 chr2 106627211 106627308 -144060546 + L1MC/D LINE L1 5580 5675 -2133 330 312 111 31 chr2 106627413 106627891 -144059963 + L1ME LINE L1 5265 5780 -341 * 14503 171 38 27 chr2 106627879 106628452 -144059402 + L1MA4A LINE L1 2621 3186 -3777 276 30 0 0 chr2 106628452 106628485 -144059369 + (GA)n Simple_repeat Simple_repeat 2 34 0 14503 171 38 27 chr2 106628485 106631439 -144056415 + L1MA4A LINE L1 3186 6184 -779 2334 102 3 3 chr2 106631439 106631752 -144056102 + AluSp SINE Alu 1 313 0 14503 171 38 27 chr2 106631752 106631790 -144056064 + L1MA4A LINE L1 6184 6220 -743 2907 144 68 2 chr2 106631793 106632308 -144055546 + L1MA4A LINE L1 6452 7000 -5 667 266 167 9 chr2 106632882 106633426 -144054428 - L1M4 LINE L1 -1663 4483 3854 624 275 85 10 chr2 106633431 106633726 -144054128 - L1M4 LINE L1 -2420 3726 3410 206 61 0 30 chr2 106633868 106633901 -144053953 + (GA)n Simple_repeat Simple_repeat 1 32 0 261 323 124 35 chr2 106634763 106634895 -144052959 + MIR SINE MIR 34 192 -70 2361 89 13 0 chr2 106634895 106635197 -144052657 - AluSx SINE Alu -6 306 1 261 323 124 35 chr2 106635197 106635265 -144052589 + MIR SINE MIR 192 252 -10 2436 157 74 5 chr2 106636034 106636481 -144051373 - L1MB3 LINE L1 -8 6175 5698 510 281 30 6 chr2 106637158 106637325 -144050529 - MIR SINE MIR -78 184 14 536 224 30 0 chr2 106637390 106637524 -144050330 + MER5A DNA MER1_type 1 138 -51 450 0 0 0 chr2 106637535 106637585 -144050269 + (TG)n Simple_repeat Simple_repeat 2 51 0 1557 184 4 0 chr2 106637634 106637889 -144049965 - AluJb SINE Alu -56 256 1 2008 79 0 8 chr2 106640758 106641012 -144046842 + AluY SINE Alu 45 296 -15 1005 281 191 17 chr2 106641031 106641901 -144045953 + L2 LINE L2 2285 3308 -5 375 339 131 18 chr2 106642071 106642292 -144045562 - L1MC4a LINE L1 -1902 5906 5661 339 188 188 24 chr2 106642552 106642717 -144045137 - L1MC4a LINE L1 -2336 5472 5281 371 241 75 92 chr2 106642761 106642989 -144044865 - MLT1J LTR MaLR -102 409 186 1694 166 0 14 chr2 106643245 106643541 -144044313 + AluJo SINE Alu 1 292 -20 266 363 71 9 chr2 106644394 106644507 -144043347 - L3b LINE CR1 -23 1560 1441 181 132 53 26 chr2 106644759 106644797 -144043057 - L3b LINE CR1 -365 1218 1180 2057 116 0 0 chr2 106645204 106645508 -144042346 + AluSq SINE Alu 1 304 0 1060 237 0 25 chr2 106645523 106645768 -144042086 + MER8 DNA MER2_type 1 239 0 457 304 175 40 chr2 106646222 106646500 -144041354 + L1ME4a LINE L1 5595 5834 -287 1697 166 109 6 chr2 106646500 106646831 -144041023 - MLT1A1 LTR MaLR 0 365 1 457 304 175 40 chr2 106646831 106646884 -144040970 + L1ME4a LINE L1 5834 5878 -243 1703 147 0 8 chr2 106646884 106647149 -144040705 + AluSq SINE Alu 19 281 -32 459 35 0 0 chr2 106647150 106647207 -144040647 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 457 304 175 40 chr2 106647207 106647277 -144040577 + L1ME4a LINE L1 5877 6054 -67 1239 70 0 0 chr2 106647441 106647599 -144040255 + L1PB1 LINE L1 5994 6151 0 195 296 68 68 chr2 106648767 106648871 -144038983 - L3 LINE CR1 -118 1459 1353 1778 227 35 62 chr2 106648871 106649390 -144038464 - MLT1D LTR MaLR 0 505 1 195 296 68 68 chr2 106649390 106649417 -144038437 - L3 LINE CR1 -223 1354 1328 449 220 23 23 chr2 106649446 106649578 -144038276 + L1MA10 LINE L1 6201 6332 -2 189 214 0 0 chr2 106649838 106649880 -144037974 + (CA)n Simple_repeat Simple_repeat 2 43 0 2005 132 3 0 chr2 106650693 106651004 -144036850 + AluSx SINE Alu 1 312 0 28 48 0 0 chr2 106651232 106651274 -144036580 + AT_rich Low_complexity Low_complexity 1 42 0 684 97 10 13 chr2 106651552 106651664 -144036190 + L1P5 LINE L1 5677 5786 -365 1333 91 0 0 chr2 106651941 106652117 -144035737 + AluSg/x SINE Alu 134 309 -3 1876 255 26 42 chr2 106652382 106652497 -144035357 + MLT1E LTR MaLR 3 118 -475 1857 129 47 78 chr2 106652497 106652884 -144034970 - THE1C LTR MaLR 0 375 1 1876 255 26 42 chr2 106652884 106653369 -144034485 + MLT1E LTR MaLR 118 593 0 2275 100 0 3 chr2 106653575 106653885 -144033969 - AluSx SINE Alu -1 311 3 2068 252 23 21 chr2 106655722 106656238 -144031616 - LTR40a LTR ERVL -2 517 1 295 206 33 76 chr2 106656364 106656456 -144031398 - MIR3 SINE MIR -36 172 85 1000 301 42 13 chr2 106656590 106657012 -144030842 - LTR16C LTR ERVL -3 488 1 279 79 0 0 chr2 106658138 106658176 -144029678 + (TG)n Simple_repeat Simple_repeat 2 39 0 727 269 124 77 chr2 106658204 106658266 -144029588 - LTR16C LTR ERVL 0 491 433 1535 227 48 19 chr2 106658266 106658645 -144029209 + MLT1B LTR MaLR 1 390 0 727 269 124 77 chr2 106658645 106659051 -144028803 - LTR16C LTR ERVL -58 433 1 836 102 94 0 chr2 106659325 106659452 -144028402 - MER85 DNA T2_type 0 139 1 618 197 56 40 chr2 106660705 106660903 -144026951 - L1MC5 LINE L1 -430 7531 7331 1951 104 76 48 chr2 106660977 106661331 -144026523 - THE1B LTR MaLR 0 364 1 1621 232 72 17 chr2 106661611 106662080 -144025774 + MLT1D LTR MaLR 10 504 -1 453 285 78 6 chr2 106662391 106662570 -144025284 + MIR SINE MIR 69 260 -2 2068 104 0 17 chr2 106662735 106663023 -144024831 + AluSx SINE Alu 11 293 -19 2124 112 0 10 chr2 106663455 106663759 -144024095 - AluSx SINE Alu -8 304 4 196 292 146 22 chr2 106665254 106665343 -144022511 + L2 LINE L2 3206 3305 -8 * 236 313 92 37 chr2 106665325 106665651 -144022203 + L2 LINE L2 2322 2665 -649 317 239 88 26 chr2 106665879 106665992 -144021862 - LTR67 LTR ERVL 0 557 438 317 266 258 8 chr2 106666672 106666800 -144021054 - MIR SINE MIR -19 243 84 1208 235 123 28 chr2 106667303 106667725 -144020129 + MLT1C LTR MaLR 6 467 0 184 328 118 58 chr2 106668373 106668855 -144018999 - L2 LINE L2 -925 2389 1879 216 248 190 50 chr2 106669193 106669314 -144018540 - MIR SINE MIR -94 168 31 24 85 0 0 chr2 106670323 106670382 -144017472 + GC_rich Low_complexity Low_complexity 1 59 0 303 28 0 0 chr2 106670443 106670479 -144017375 + (CCG)n Simple_repeat Simple_repeat 3 38 0 35 98 0 0 chr2 106670497 106670609 -144017245 + GC_rich Low_complexity Low_complexity 1 112 0 21 57 0 0 chr2 106670779 106670814 -144017040 + GC_rich Low_complexity Low_complexity 1 35 0 1537 156 0 99 chr2 106673959 106674293 -144013561 - AluJo SINE Alu -11 301 1 213 39 0 0 chr2 106674628 106674654 -144013200 + (CAA)n Simple_repeat Simple_repeat 2 27 0 595 212 116 0 chr2 106675459 106675605 -144012249 + FAM SINE Alu 1 163 -12 282 29 0 0 chr2 106675609 106675644 -144012210 + (CA)n Simple_repeat Simple_repeat 2 36 0 1135 165 74 110 chr2 106675652 106676015 -144011839 - MLT1B LTR MaLR -33 357 8 716 262 65 18 chr2 106677458 106677737 -144010117 - MER33 DNA MER1_type -22 302 11 677 244 37 0 chr2 106678130 106678294 -144009560 - L1PB4 LINE L1 -9 6147 5978 585 63 221 11 chr2 106678301 106678396 -144009458 - L1PB4 LINE L1 -284 5872 5758 414 239 90 8 chr2 106678510 106678644 -144009210 - MIR SINE MIR -41 221 77 195 244 75 119 chr2 106682063 106682223 -144005631 - MIR SINE MIR -71 191 39 2142 98 3 3 chr2 106682387 106682682 -144005172 - AluSp SINE Alu -18 295 1 342 371 33 13 chr2 106683137 106683288 -144004566 - L2 LINE L2 -17 3255 3102 2155 107 3 0 chr2 106683976 106684285 -144003569 - AluSg SINE Alu 0 310 1 2826 171 98 37 chr2 106685067 106685763 -144002091 - L1MC3 LINE L1 0 7785 7048 281 308 108 33 chr2 106685897 106686017 -144001837 + MER5A DNA MER1_type 61 189 0 1764 121 8 8 chr2 106687184 106687448 -144000406 + AluJb SINE Alu 12 275 -37 183 262 82 33 chr2 106687754 106687815 -144000039 + MIR3 SINE MIR 122 185 -23 895 256 121 37 chr2 106688130 106688490 -143999364 + Charlie4a DNA MER1_type 37 436 -1525 2067 108 0 13 chr2 106688490 106688795 -143999059 + AluSx SINE Alu 1 301 -11 895 256 121 37 chr2 106688795 106688840 -143999014 + Charlie4a DNA MER1_type 436 476 -32 24 0 0 0 chr2 106689090 106689114 -143998740 + AT_rich Low_complexity Low_complexity 1 24 0 563 257 138 0 chr2 106689531 106689683 -143998171 - MIR SINE MIR 0 262 90 393 288 73 41 chr2 106690526 106690745 -143997109 - L1ME LINE L1 -387 5734 5509 384 118 0 0 chr2 106691364 106691432 -143996422 + (TG)n Simple_repeat Simple_repeat 2 69 0 366 235 102 31 chr2 106691460 106691558 -143996296 + MLT1E1 LTR MaLR 534 638 -16 1556 194 10 7 chr2 106691896 106692200 -143995654 - AluJo SINE Alu -7 305 1 762 245 99 10 chr2 106693058 106693250 -143994604 + MER58A DNA MER1_type 2 210 -14 197 294 0 0 chr2 106693270 106693321 -143994533 + MIR SINE MIR 25 75 -133 517 262 159 59 chr2 106693596 106693886 -143993968 - MER33 DNA MER1_type 0 324 6 1058 265 30 8 chr2 106693900 106694164 -143993690 - MER21B LTR ERV1 -124 739 470 1177 102 75 21 chr2 106694180 106694366 -143993488 - MER30 DNA MER1_type -34 196 1 537 190 18 86 chr2 106694523 106694686 -143993168 - MER21B LTR ERV1 -614 249 98 397 282 23 35 chr2 106694656 106694811 -143993043 - MER21B LTR ERV1 -399 206 11 * 255 227 206 0 chr2 106695495 106695592 -143992262 + MIR SINE MIR 28 144 -118 195 42 0 0 chr2 106695700 106695724 -143992130 + (A)n Simple_repeat Simple_repeat 1 24 0 2442 58 0 0 chr2 106696486 106696797 -143991057 - AluY SINE Alu 0 311 1 1986 115 7 0 chr2 106697333 106697620 -143990234 + AluSq SINE Alu 6 294 -19 1597 154 7 24 chr2 106698940 106699233 -143988621 - AluJo SINE Alu -14 298 11 349 248 46 18 chr2 106699730 106699839 -143988015 - L2 LINE L2 -2 3311 3200 2197 108 0 0 chr2 106700056 106700353 -143987501 - AluSx SINE Alu -15 297 1 465 188 158 10 chr2 106700958 106701092 -143986762 + FLAM_C SINE Alu 3 151 0 192 211 105 53 chr2 106701881 106701957 -143985897 + MIR3 SINE MIR 120 199 -9 268 219 118 146 chr2 106702955 106703394 -143984460 - LTR33A LTR ERVL -25 498 72 1063 163 0 16 chr2 106704752 106704936 -143982918 - FRAM SINE Alu 0 176 1 2177 116 0 0 chr2 106705069 106705372 -143982482 + AluSx SINE Alu 1 303 -9 351 0 0 0 chr2 106706370 106706409 -143981445 + (CA)n Simple_repeat Simple_repeat 2 40 0 264 296 25 0 chr2 106706556 106706637 -143981217 + MER94 DNA DNA 4 86 -48 1909 168 46 3 chr2 106706661 106707006 -143980848 + MLT1A1 LTR MaLR 1 360 -5 245 341 56 45 chr2 106707251 106707518 -143980336 + L2 LINE L2 2829 3098 -174 453 257 142 26 chr2 106707562 106707788 -143980066 + MIR SINE MIR 2 253 -9 181 195 24 24 chr2 106707875 106707916 -143979938 + L2 LINE L2 3268 3308 -5 877 165 0 0 chr2 106710155 106710313 -143977541 - AluJb SINE Alu -19 293 136 2277 77 0 0 chr2 106711011 106711308 -143976546 - AluY SINE Alu 0 311 15 203 316 71 41 chr2 106712147 106712245 -143975609 - L2 LINE L2 0 3272 3172 197 233 0 100 chr2 106712309 106712369 -143975485 - MIR SINE MIR -2 260 207 1346 215 93 6 chr2 106713338 106713682 -143974172 + MLT1A2 LTR MaLR 1 374 0 2124 118 0 3 chr2 106715228 106715533 -143972321 - AluSx SINE Alu -8 304 1 640 208 46 35 chr2 106715751 106715924 -143971930 - MER5A DNA MER1_type -2 187 13 305 288 67 17 chr2 106717148 106717276 -143970578 + MIR3 SINE MIR 69 201 -7 247 299 158 30 chr2 106718122 106718286 -143969568 + MIR3 SINE MIR 14 198 -10 345 197 111 26 chr2 106718370 106718487 -143969367 - L1MC5 LINE L1 -105 7856 7730 396 216 122 65 chr2 106718497 106718742 -143969112 - L1MC5 LINE L1 -300 7661 7403 309 283 202 19 chr2 106718746 106719004 -143968850 - L1MC5 LINE L1 -595 7366 7062 484 278 73 17 chr2 106719237 106719471 -143968383 - MER41B LTR ERV1 -205 430 184 288 220 134 124 chr2 106719582 106720000 -143967854 - L1MC5 LINE L1 -929 7032 6611 2038 118 3 13 chr2 106720090 106720396 -143967458 - AluSx SINE Alu -9 303 1 24 53 0 0 chr2 106720482 106720520 -143967334 + AT_rich Low_complexity Low_complexity 1 38 0 901 94 0 0 chr2 106720732 106720888 -143966966 - AluSg/x SINE Alu 0 323 168 323 318 26 85 chr2 106720959 106721045 -143966809 - L1MC4a LINE L1 -1738 6070 5999 1220 154 69 12 chr2 106721045 106721291 -143966563 - L1MC1 LINE L1 0 6333 6074 323 318 26 85 chr2 106721291 106721393 -143966461 - L1MC4a LINE L1 -1809 5999 5893 545 211 211 27 chr2 106721626 106721811 -143966043 + MER20 DNA MER1_type 1 219 0 275 219 62 0 chr2 106724880 106724944 -143962910 - L1MD3 LINE L1 -83 7912 7845 254 308 78 62 chr2 106725079 106725628 -143962226 - L1MC4a LINE L1 -813 5333 4776 236 302 52 35 chr2 106726960 106727076 -143960778 + L3 LINE CR1 99 216 -1361 492 344 133 3 chr2 106727989 106728326 -143959528 + L3 LINE CR1 501 881 -696 2508 129 46 10 chr2 106728409 106728826 -143959028 - MSTB1 LTR MaLR 0 432 1 285 276 172 0 chr2 106728919 106729035 -143958819 + L2 LINE L2 3136 3271 -1 233 286 43 0 chr2 106729118 106729188 -143958666 + L3 LINE CR1 1227 1299 -278 200 269 223 15 chr2 106729513 106729643 -143958211 - MIR SINE MIR -58 204 48 207 231 253 11 chr2 106729804 106729895 -143957959 - MER5A DNA MER1_type -1 188 76 274 304 12 93 chr2 106731203 106731364 -143956490 - L2 LINE L2 -227 3045 2898 27 62 0 37 chr2 106731492 106731573 -143956281 + AT_rich Low_complexity Low_complexity 1 78 0 1584 174 35 0 chr2 106731578 106731860 -143955994 - L1MA9 LINE L1 -239 6073 5782 1662 188 31 22 chr2 106731863 106732219 -143955635 - MER46B DNA MER2_type -1 235 2 218 171 0 0 chr2 106732219 106732254 -143955600 + (TG)n Simple_repeat Simple_repeat 2 36 0 2400 62 0 3 chr2 106732273 106732581 -143955273 - AluY SINE Alu -4 307 1 254 186 0 0 chr2 106732589 106732637 -143955217 - L1MA9 LINE L1 -394 5762 5720 841 135 0 28 chr2 106733751 106733929 -143953925 + (TCCC)n Simple_repeat Simple_repeat 4 176 0 216 193 0 0 chr2 106733928 106733968 -143953886 + CT-rich Low_complexity Low_complexity 3 45 -14 * 1856 124 15 0 chr2 106733968 106734241 -143953613 - AluSc SINE Alu -32 277 1 216 193 0 0 chr2 106734241 106734257 -143953597 + CT-rich Low_complexity Low_complexity 44 59 0 338 276 144 21 chr2 106734719 106734962 -143952892 + L1MC5 LINE L1 7500 7772 -189 1636 173 68 44 chr2 106735352 106735717 -143952137 - MLT1B LTR MaLR -16 374 1 194 292 108 69 chr2 106735763 106735893 -143951961 - L2 LINE L2 -134 3138 3004 2090 88 39 3 chr2 106736937 106737222 -143950632 + AluSc SINE Alu 1 295 -14 1997 174 64 27 chr2 106737688 106738126 -143949728 + LTR32 LTR ERVL 15 468 -3 183 269 111 37 chr2 106741627 106741735 -143946119 - L3 LINE CR1 -590 987 872 915 162 16 5 chr2 106742418 106742603 -143945251 + AluJo SINE Alu 122 308 -4 1129 129 0 0 chr2 106743300 106743463 -143944391 + AluSg/x SINE Alu 135 297 -15 7374 32 5 1 chr2 106743840 106744706 -143943148 + L1PA5 LINE L1 5278 6146 -8 21 0 0 0 chr2 106745596 106745617 -143942237 + AT_rich Low_complexity Low_complexity 1 21 0 230 212 0 45 chr2 106748001 106748067 -143939787 - MIR SINE MIR -108 154 92 369 0 0 0 chr2 106749501 106749542 -143938312 + (TG)n Simple_repeat Simple_repeat 2 42 0 1988 125 44 38 chr2 106752401 106752768 -143935086 - THE1C LTR MaLR 0 375 7 204 179 0 0 chr2 106753163 106753202 -143934652 + (TA)n Simple_repeat Simple_repeat 2 40 0 1528 210 71 52 chr2 106753202 106753356 -143934498 + L1M4 LINE L1 2264 2414 -3732 2572 71 0 0 chr2 106753356 106753667 -143934187 - AluY SINE Alu 0 311 1 1528 210 71 52 chr2 106753667 106754030 -143933824 + L1M4 LINE L1 2414 2791 -3355 969 235 38 24 chr2 106754061 106754482 -143933372 + L1MD2 LINE L1 5882 6359 0 191 307 45 23 chr2 106755001 106755089 -143932765 + MIR SINE MIR 25 114 -94 1708 164 108 9 chr2 106755673 106756088 -143931766 - L1MC3 LINE L1 -16 7979 7286 236 238 24 36 chr2 106756132 106756216 -143931638 - MLT1F1 LTR MaLR -450 117 35 3821 116 58 17 chr2 106756350 106756582 -143931272 - L1MA5 LINE L1 -23 6277 6046 1335 190 108 71 chr2 106756582 106757039 -143930815 - L1PA7 LINE L1 -136 6018 5579 414 0 0 0 chr2 106757039 106757085 -143930769 + (TG)n Simple_repeat Simple_repeat 2 47 0 1335 190 108 71 chr2 106757085 106757510 -143930344 - L1PA7 LINE L1 -575 5579 5090 * 1480 152 30 11 chr2 106757507 106757777 -143930077 + L1 LINE L1 4501 4775 -1371 11193 190 63 31 chr2 106757822 106759218 -143928636 - L1 LINE L1 -1055 6153 4804 284 100 0 20 chr2 106759218 106759268 -143928586 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 11193 190 63 31 chr2 106759268 106759450 -143928404 - L1 LINE L1 -2404 4804 4629 2006 142 19 10 chr2 106759450 106759759 -143928095 - AluSx SINE Alu 0 312 1 11193 190 63 31 chr2 106759759 106761020 -143926834 - L1 LINE L1 -2579 4629 3410 1703 175 0 46 chr2 106761020 106761346 -143926508 - AluJo SINE Alu -1 311 1 11193 190 63 31 chr2 106761346 106761732 -143926122 - L1 LINE L1 -3798 3410 3038 423 98 0 0 chr2 106761732 106761793 -143926061 + (TA)n Simple_repeat Simple_repeat 2 62 0 11193 190 63 31 chr2 106761793 106763604 -143924250 - L1 LINE L1 -4170 3038 2 717 303 98 28 chr2 106763674 106764327 -143923527 - L1ME3A LINE L1 -208 5962 5264 21 36 0 0 chr2 106764664 106764692 -143923162 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 106764886 106764913 -143922941 + AT_rich Low_complexity Low_complexity 1 27 0 248 290 123 43 chr2 106765159 106765459 -143922395 - L2 LINE L2 -14 3299 2976 462 286 213 45 chr2 106765574 106766697 -143921157 - L2 LINE L2 -508 2806 1495 3774 174 98 19 chr2 106766795 106767119 -143920735 - MER21B LTR ERV1 -52 811 514 3204 135 127 31 chr2 106767119 106767757 -143920097 + LTR34 LTR ERV1 1 699 0 3774 174 98 19 chr2 106767757 106768183 -143919671 - MER21B LTR ERV1 -349 514 1 340 295 217 0 chr2 106768192 106768409 -143919445 - L2 LINE L2 -1930 1384 1121 2182 103 13 7 chr2 106768454 106768754 -143919100 - AluSp SINE Alu -11 302 1 21 36 0 0 chr2 106768839 106768867 -143918987 + AT_rich Low_complexity Low_complexity 1 28 0 1378 134 166 47 chr2 106769419 106769739 -143918115 - MER46B DNA MER2_type -3 233 1 3874 147 79 84 chr2 106769866 106770786 -143917068 + L1MC3 LINE L1 6778 7693 -92 1745 120 17 62 chr2 106770810 106771102 -143916752 + AluSg SINE Alu 1 279 -31 435 148 0 0 chr2 106771116 106771204 -143916650 + (TA)n Simple_repeat Simple_repeat 2 89 0 2050 135 10 3 chr2 106771766 106772062 -143915792 - AluSx SINE Alu -14 298 1 3822 165 30 1 chr2 106772998 106773671 -143914183 + L1MB3 LINE L1 5447 6138 -45 228 290 190 30 chr2 106774498 106774698 -143913156 - MIR SINE MIR 0 262 31 1449 142 31 46 chr2 106775470 106775731 -143912123 + AluJo SINE Alu 1 257 -55 2145 69 24 10 chr2 106777634 106777925 -143909929 - AluSc SINE Alu -14 295 1 302 320 23 23 chr2 106778760 106778888 -143908966 - MER5B DNA MER1_type -29 149 22 25 0 0 0 chr2 106779353 106779378 -143908476 + AT_rich Low_complexity Low_complexity 1 25 0 1169 176 10 0 chr2 106779783 106779988 -143907866 - L1MC1 LINE L1 -208 6125 5919 1898 190 24 54 chr2 106779988 106780452 -143907402 - MER31B LTR ERV1 -2 464 15 1705 132 0 23 chr2 106780458 106780724 -143907130 - L1MC1 LINE L1 -412 5921 5662 856 220 8 51 chr2 106780726 106780981 -143906873 - L1MD3 LINE L1 -23 7972 7729 2531 73 0 0 chr2 106782201 106782502 -143905352 - AluY SINE Alu -10 301 1 375 299 92 37 chr2 106783711 106783928 -143903926 - L3 LINE CR1 -87 1490 1262 204 88 15 73 chr2 106784371 106784439 -143903415 + (TTTTTG)n Simple_repeat Simple_repeat 1 64 0 1249 178 48 0 chr2 106784645 106784853 -143903001 - AluJb SINE Alu -30 282 65 1711 168 10 39 chr2 106786371 106786681 -143901173 + AluJo SINE Alu 1 301 -11 2380 110 0 0 chr2 106787874 106788183 -143899671 - AluSx SINE Alu -3 309 1 297 0 0 0 chr2 106788272 106788305 -143899549 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 432 222 200 0 chr2 106789027 106789162 -143898692 + L1MC4 LINE L1 7744 7905 -137 511 268 29 57 chr2 106790101 106790310 -143897544 + MIR SINE MIR 5 207 -55 414 0 0 0 chr2 106791197 106791243 -143896611 + (CA)n Simple_repeat Simple_repeat 2 47 0 461 315 66 5 chr2 106791581 106791778 -143896076 - MIR SINE MIR -18 244 36 2120 120 3 0 chr2 106792271 106792582 -143895272 - AluSp SINE Alu 0 312 1 346 229 95 29 chr2 106792596 106792701 -143895153 - L1ME4a LINE L1 -40 6081 5970 2019 113 23 46 chr2 106792787 106793132 -143894722 - MER1B DNA MER1_type 0 337 1 226 282 81 48 chr2 106795733 106795857 -143891997 - MIR SINE MIR -70 192 65 34 42 0 0 chr2 106796162 106796210 -143891644 + AT_rich Low_complexity Low_complexity 1 48 0 1926 129 16 3 chr2 106796841 106797144 -143890710 + AluSx SINE Alu 1 307 -5 2208 89 10 7 chr2 106797859 106798163 -143889691 - AluSx SINE Alu -7 305 1 219 269 10 67 chr2 106801541 106801645 -143886209 + MIR SINE MIR 40 137 -71 1868 158 57 21 chr2 106801856 106802192 -143885662 + MLT1A1 LTR MaLR 18 365 0 180 283 0 0 chr2 106802198 106802244 -143885610 + MIR3 SINE MIR 161 206 -2 340 200 104 44 chr2 106804185 106804320 -143883534 + MIR SINE MIR 65 207 -55 2202 143 15 59 chr2 106804628 106805034 -143882820 + MLT1B LTR MaLR 1 388 -2 209 303 0 79 chr2 106805034 106805110 -143882744 - MIR SINE MIR -114 148 79 231 375 19 19 chr2 106805229 106805333 -143882521 + L2 LINE L2 3152 3255 -17 369 231 54 68 chr2 106806551 106806698 -143881156 + MER112 DNA MER1_type 105 249 -11 244 295 0 0 chr2 106806963 106807024 -143880830 - L3 LINE CR1 -15 1562 1502 1537 142 26 53 chr2 106807149 106807452 -143880402 - AluJo SINE Alu -7 295 1 706 191 60 55 chr2 106811891 106812074 -143875780 - MER5A DNA MER1_type -1 188 5 448 272 95 18 chr2 106812738 106812907 -143874947 + MER5A DNA MER1_type 4 185 -4 1251 220 112 1 chr2 106814928 106815276 -143872578 + MLT1F1 LTR MaLR 1 395 -147 740 128 38 190 chr2 106815803 106815940 -143871914 - MER5A DNA MER1_type -5 184 88 1686 188 0 6 chr2 106815940 106816254 -143871600 - AluJb SINE Alu 0 312 1 740 128 38 190 chr2 106816254 106816327 -143871527 - MER5A DNA MER1_type -101 88 6 228 305 9 9 chr2 106817477 106817582 -143870272 + (CA)n Simple_repeat Simple_repeat 1 105 0 2106 101 23 7 chr2 106817907 106818215 -143869639 - AluSq SINE Alu 0 313 1 944 124 112 6 chr2 106818407 106818576 -143869278 + AluSp SINE Alu 120 306 -7 2087 88 3 32 chr2 106818922 106819230 -143868624 + AluSq SINE Alu 1 299 -14 261 83 0 0 chr2 106820353 106820389 -143867465 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 0 0 0 chr2 106820389 106820410 -143867444 + AT_rich Low_complexity Low_complexity 1 21 0 437 297 168 5 chr2 106821045 106821230 -143866624 - MIR SINE MIR -8 254 40 214 316 40 0 chr2 106822578 106822654 -143865200 + MIR SINE MIR 67 145 -117 20002 157 18 9 chr2 106823464 106827385 -143860469 - L1PA13 LINE L1 0 6814 2848 252 77 0 0 chr2 106827385 106827424 -143860430 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 20002 157 18 9 chr2 106827424 106828052 -143859802 - L1PA13 LINE L1 -3966 2848 2227 4681 188 52 5 chr2 106828051 106828876 -143858978 - L1PA13 LINE L1 -5923 864 1 * 2043 124 68 25 chr2 106829046 106829315 -143858539 + MER1B DNA MER1_type 2 289 -2421 306 0 0 0 chr2 106829315 106829349 -143858505 + (CA)n Simple_repeat Simple_repeat 1 34 0 2043 124 68 25 chr2 106829349 106829401 -143858453 + MER1B DNA MER1_type 289 337 0 2234 103 0 0 chr2 106830365 106830667 -143857187 + AluSx SINE Alu 1 302 -10 808 160 93 0 chr2 106831131 106831281 -143856573 + AluSp SINE Alu 137 300 -13 557 252 137 74 chr2 106831423 106831693 -143856161 + L2 LINE L2 3027 3313 0 281 331 43 7 chr2 106831714 106831853 -143856001 - HAL1b LINE L1 -766 582 439 236 89 107 0 chr2 106832599 106832655 -143855199 - MER116 DNA Mariner -12 68 7 216 195 24 0 chr2 106832699 106832740 -143855114 + L2 LINE L2 3271 3312 -1 4135 150 12 26 chr2 106833148 106833888 -143853966 - L1MB3 LINE L1 -2 6181 5452 23 33 0 0 chr2 106834225 106834255 -143853599 + AT_rich Low_complexity Low_complexity 1 30 0 340 313 39 8 chr2 106834450 106834578 -143853276 - L2 LINE L2 -20 3293 3162 1399 85 18 58 chr2 106834629 106834852 -143853002 + AluSx SINE Alu 1 214 -98 1838 138 3 0 chr2 106834957 106835239 -143852615 - AluJb SINE Alu -19 293 11 228 308 169 31 chr2 106835522 106835782 -143852072 - L2 LINE L2 -960 2354 2059 332 266 65 14 chr2 106835786 106835925 -143851929 - L2 LINE L2 -1357 1957 1812 180 345 241 15 chr2 106837846 106838107 -143849747 - L2 LINE L2 -2266 1048 729 2735 176 62 6 chr2 106838217 106838705 -143849149 + MLT2B2 LTR ERVL 1 515 0 315 308 11 11 chr2 106838719 106838810 -143849044 - MIR3 SINE MIR -11 197 107 1040 256 163 50 chr2 106840071 106840594 -143847260 + MLT1G1 LTR MaLR 2 555 0 365 316 51 84 chr2 106840662 106841077 -143846777 + L2 LINE L2 2866 3266 -6 3149 104 22 11 chr2 106842179 106842412 -143845442 - MER4C LTR ERV1 0 465 236 2122 133 0 0 chr2 106842412 106842721 -143845133 + AluSx SINE Alu 1 309 -3 3149 104 22 11 chr2 106842721 106842947 -143844907 - MER4C LTR ERV1 -229 236 1 1147 199 45 7 chr2 106846590 106846881 -143840973 + MER33 DNA MER1_type 23 324 0 303 226 104 66 chr2 106847117 106847223 -143840631 + HAL1 LINE L1 1176 1285 -1222 1813 152 10 3 chr2 106847478 106847787 -143840067 - AluJo SINE Alu -1 311 1 279 216 94 109 chr2 106847819 106848000 -143839854 - L1ME3 LINE L1 -23 6147 5965 3295 126 17 10 chr2 106848016 106848414 -143839440 + L1PA16 LINE L1 5195 5589 -577 2019 134 46 22 chr2 106848414 106848780 -143839074 + THE1C LTR MaLR 1 375 0 3295 126 17 10 chr2 106848780 106849145 -143838709 + L1PA16 LINE L1 5589 6157 -9 253 280 54 0 chr2 106849202 106849295 -143838559 - L1ME3 LINE L1 -210 5960 5863 231 133 0 0 chr2 106849320 106849365 -143838489 + (TG)n Simple_repeat Simple_repeat 2 46 0 330 132 0 0 chr2 106849514 106849567 -143838287 + (A)n Simple_repeat Simple_repeat 1 53 0 515 246 40 0 chr2 106849701 106849827 -143838027 - MER5A DNA MER1_type -2 187 57 2303 105 0 0 chr2 106850019 106850332 -143837522 + AluSq SINE Alu 1 313 0 227 288 0 0 chr2 106850583 106850642 -143837212 - L1M4 LINE L1 -1870 4276 4218 294 266 125 8 chr2 106850654 106850782 -143837072 - LTR33A LTR ERVL -194 329 187 407 275 286 9 chr2 106850859 106851299 -143836555 - L2 LINE L2 -1110 2204 1643 2619 143 2 32 chr2 106851333 106851457 -143836397 - Tigger2a DNA MER2_type -2276 432 306 3718 182 22 20 chr2 106851457 106852172 -143835682 - LTR62 LTR ERVK -2 717 1 2619 143 2 32 chr2 106852172 106852489 -143835365 - Tigger2a DNA MER2_type -2402 306 4 1751 164 14 0 chr2 106852901 106853194 -143834660 - AluJo SINE Alu -11 301 5 225 351 13 0 chr2 106853961 106854038 -143833816 + LTR67 LTR ERVL 433 510 -47 1845 154 0 3 chr2 106855609 106855914 -143831940 - AluJo SINE Alu -8 304 1 441 0 0 0 chr2 106856396 106856445 -143831409 + (TG)n Simple_repeat Simple_repeat 2 50 0 324 281 52 0 chr2 106856898 106856994 -143830860 - MER103 DNA DNA -48 118 18 2121 125 0 0 chr2 106857299 106857603 -143830251 + AluSx SINE Alu 1 304 -8 662 189 114 4 chr2 106857636 106857709 -143830145 - Charlie5 DNA MER1_type 0 2624 2560 1968 141 3 0 chr2 106857709 106858013 -143829841 + AluSg SINE Alu 1 305 -5 662 189 114 4 chr2 106858013 106858167 -143829687 - Charlie5 DNA MER1_type -64 2560 2372 199 257 40 54 chr2 106858213 106858287 -143829567 + MER5B DNA MER1_type 38 110 -68 2287 72 0 3 chr2 106858679 106858972 -143828882 - AluY SINE Alu -19 292 1 259 325 9 35 chr2 106859517 106859631 -143828223 - L2 LINE L2 -18 3254 3144 3116 163 35 50 chr2 106860238 106860859 -143826995 - LTR9 LTR ERV1 0 612 1 269 195 16 16 chr2 106862120 106862248 -143825606 + (CA)n Simple_repeat Simple_repeat 1 128 0 433 260 23 6 chr2 106862271 106862448 -143825406 + (CA)n Simple_repeat Simple_repeat 1 180 0 503 249 29 0 chr2 106862489 106862662 -143825192 + (CA)n Simple_repeat Simple_repeat 2 179 0 477 244 23 9 chr2 106862687 106863226 -143824628 + (CA)n Simple_repeat Simple_repeat 1 546 0 487 268 12 6 chr2 106863237 106863401 -143824453 + (CA)n Simple_repeat Simple_repeat 1 165 0 222 91 0 0 chr2 106863422 106863455 -143824399 + (CA)n Simple_repeat Simple_repeat 1 33 0 388 265 43 5 chr2 106864033 106864161 -143823693 + MIR SINE MIR 19 144 -64 235 245 0 0 chr2 106864158 106864207 -143823647 - L2 LINE L2 -11 3302 3254 * 2411 141 64 7 chr2 106864379 106864784 -143823070 + MSTA LTR MaLR 1 428 0 302 238 111 24 chr2 106864867 106864993 -143822861 + MLT1J1 LTR MaLR 291 427 -19 2560 147 31 2 chr2 106865002 106865416 -143822438 + MSTB LTR MaLR 1 426 0 615 255 43 15 chr2 106865959 106866249 -143821605 + L1MC5 LINE L1 7230 7415 -393 1257 252 68 25 chr2 106866269 106866449 -143821405 - MLT1A2 LTR MaLR -6 368 197 2239 87 0 26 chr2 106866449 106866758 -143821096 - AluY SINE Alu -10 301 1 1257 252 68 25 chr2 106866758 106866930 -143820924 - MLT1A2 LTR MaLR -177 197 1 358 309 16 32 chr2 106867157 106867280 -143820574 - L2 LINE L2 -2 3311 3191 689 195 16 0 chr2 106867378 106867501 -143820353 - Tigger3b DNA MER2_type 0 1231 1107 * 5952 105 41 11 chr2 106867496 106868407 -143819447 - Tigger3b DNA MER2_type -293 938 1 463 179 39 0 chr2 106868940 106869018 -143818836 - Charlie3 DNA MER1_type -8 2702 2622 * 707 146 0 0 chr2 106869016 106869119 -143818735 - Charlie3 DNA MER1_type -2464 246 144 228 147 0 0 chr2 106869124 106869158 -143818696 - Charlie3 DNA MER1_type -2676 34 1 1893 167 27 30 chr2 106869705 106870071 -143817783 - MLT1A1 LTR MaLR 0 365 1 308 273 56 62 chr2 106870223 106870384 -143817470 + MLT1H LTR MaLR 23 182 -367 282 212 106 44 chr2 106871082 106871195 -143816659 - L2 LINE L2 -1 3312 3193 2002 131 0 0 chr2 106871428 106871719 -143816135 + AluSx SINE Alu 1 291 -21 482 123 0 203 chr2 106871735 106871873 -143815981 + L1MB3 LINE L1 5677 5786 -385 222 191 0 0 chr2 106871878 106871925 -143815929 + (TA)n Simple_repeat Simple_repeat 2 48 0 240 130 43 0 chr2 106871928 106871974 -143815880 - L1M2 LINE L1 -498 5793 5746 202 150 25 0 chr2 106871984 106872024 -143815830 + (TA)n Simple_repeat Simple_repeat 1 41 0 1291 149 4 43 chr2 106872025 106872280 -143815574 + L1MB3 LINE L1 5776 6020 -163 842 153 25 0 chr2 106872441 106872604 -143815250 + L1MB3 LINE L1 6017 6183 0 208 330 58 10 chr2 106872657 106872760 -143815094 + MIR3 SINE MIR 82 189 -19 231 170 0 0 chr2 106873538 106873585 -143814269 + (TA)n Simple_repeat Simple_repeat 1 47 0 222 276 0 0 chr2 106873701 106873759 -143814095 + (TG)n Simple_repeat Simple_repeat 1 58 0 904 280 120 20 chr2 106873864 106874264 -143813590 - LTR16A LTR ERVL -8 442 3 633 145 26 15 chr2 106874279 106874477 -143813377 + GA-rich Low_complexity Low_complexity 1 200 0 239 329 49 0 chr2 106874523 106874605 -143813249 + MIR SINE MIR 104 189 -73 686 211 20 93 chr2 106874723 106874844 -143813010 - MER5A DNA MER1_type 0 189 87 2003 119 0 0 chr2 106874844 106875130 -143812724 - AluY SINE Alu -12 299 14 686 211 20 93 chr2 106875130 106875212 -143812642 - MER5A DNA MER1_type -102 87 1 876 222 67 76 chr2 106875255 106875687 -143812167 + MLT2B1 LTR ERVL 1 480 -40 377 263 12 19 chr2 106875687 106875847 -143812007 + (TA)n Simple_repeat Simple_repeat 1 159 0 231 209 48 19 chr2 106875859 106875964 -143811890 + (TA)n Simple_repeat Simple_repeat 2 109 0 371 96 0 68 chr2 106875964 106876037 -143811817 + MLT2B1 LTR ERVL 448 515 -5 789 239 17 0 chr2 106876118 106876294 -143811560 + AluJb SINE Alu 134 312 0 282 116 0 0 chr2 106876294 106876337 -143811517 + (GGAA)n Simple_repeat Simple_repeat 1 43 0 1060 123 6 6 chr2 106876337 106876516 -143811338 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 447 19 0 0 chr2 106876516 106876568 -143811286 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 2208 94 0 3 chr2 106876610 106876907 -143810947 + AluSq SINE Alu 1 296 -17 273 250 130 20 chr2 106878092 106878192 -143809662 + MLT1J2 LTR MaLR 320 434 -16 182 178 44 0 chr2 106878890 106878935 -143808919 + GA-rich Low_complexity Low_complexity 2 48 0 1564 173 85 15 chr2 106879488 106879829 -143808025 + MLT1A1 LTR MaLR 1 365 0 761 270 68 14 chr2 106880118 106880411 -143807443 - LTR16C LTR ERVL 0 491 183 1163 217 131 36 chr2 106882222 106882267 -143805587 - LTR37B LTR ERV1 -3 465 426 1038 222 111 66 chr2 106882267 106882646 -143805208 + MSTD LTR MaLR 1 396 0 1163 217 131 36 chr2 106882646 106883019 -143804835 - LTR37B LTR ERV1 -42 426 7 242 268 31 71 chr2 106885074 106885201 -143802653 + MLT1J LTR MaLR 353 474 -37 824 196 0 0 chr2 106885249 106885392 -143802462 - FRAM SINE Alu 0 176 34 560 314 162 26 chr2 106886196 106887505 -143800349 + L2 LINE L2 1817 3312 -1 1924 131 44 0 chr2 106887523 106887699 -143800155 - AluJo SINE Alu -2 310 114 195 42 0 0 chr2 106887699 106887723 -143800131 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1924 131 44 0 chr2 106887723 106887843 -143800011 - AluJo SINE Alu -198 114 1 382 293 101 25 chr2 106887865 106888063 -143799791 - MIR SINE MIR -14 248 36 717 259 48 41 chr2 106888630 106888900 -143798954 - L1ME3A LINE L1 -57 6113 5842 314 246 239 52 chr2 106890242 106890376 -143797478 + MER5A DNA MER1_type 30 188 -1 1922 122 167 32 chr2 106890436 106890813 -143797041 - MSTA LTR MaLR 0 428 1 318 280 116 48 chr2 106890813 106891138 -143796716 - L1ME4a LINE L1 -135 5986 5636 381 227 73 93 chr2 106891217 106891367 -143796487 + L1MD2 LINE L1 6096 6242 -117 336 257 0 30 chr2 106891356 106891457 -143796397 - L1ME3A LINE L1 -296 5874 5777 * 458 214 19 0 chr2 106891457 106891560 -143796294 + L1MD2 LINE L1 6242 6346 -13 302 292 125 10 chr2 106891560 106891656 -143796198 - L1ME4a LINE L1 -56 6065 5959 2252 88 0 0 chr2 106891676 106892000 -143795854 + AluY SINE Alu 1 311 0 207 0 0 0 chr2 106892332 106892355 -143795499 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 291 214 0 0 chr2 106892831 106892901 -143794953 + GA-rich Low_complexity Low_complexity 1 70 0 302 237 13 13 chr2 106893628 106893704 -143794150 - MER5B DNA MER1_type -1 177 102 669 197 213 5 chr2 106893720 106893908 -143793946 - ORSL DNA AcHobo 0 275 49 447 165 0 24 chr2 106893929 106894014 -143793840 - MER5B DNA MER1_type -95 83 1 459 0 0 0 chr2 106894752 106894803 -143793051 + (TG)n Simple_repeat Simple_repeat 2 52 0 2252 103 6 59 chr2 106894803 106895144 -143792710 - MER48 LTR ERV1 -64 323 1 5309 84 32 105 chr2 106895147 106896025 -143791829 - HERVH48 LTR ERV1 -7 6647 5834 270 275 43 0 chr2 106897896 106897965 -143789889 - MIR SINE MIR -81 181 110 697 270 52 16 chr2 106899395 106899643 -143788211 + MER46C DNA MER2_type 82 338 0 326 294 7 22 chr2 106900363 106900499 -143787355 + L1MC/D LINE L1 5687 5820 -1988 926 280 117 56 chr2 106900557 106901233 -143786621 + L2 LINE L2 445 1161 -2153 927 284 86 24 chr2 106901247 106901871 -143785983 + L2 LINE L2 2631 3298 -15 207 0 0 0 chr2 106902342 106902365 -143785489 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1783 142 35 3 chr2 106902368 106902650 -143785204 - AluSx SINE Alu -21 291 1 2283 101 0 7 chr2 106902741 106903038 -143784816 + AluSc SINE Alu 1 295 -14 964 217 187 52 chr2 106903469 106903833 -143784021 + MLT1F LTR MaLR 128 540 -2 354 272 56 24 chr2 106903836 106903961 -143783893 + MLT1F-int LTR MaLR 2 130 -1241 685 283 74 27 chr2 106903962 106904298 -143783556 + MLT1F-int LTR MaLR 249 600 -771 507 333 0 0 chr2 106904546 106904708 -143783146 + MLT1F-int LTR MaLR 700 861 -510 375 208 96 119 chr2 106904904 106905175 -143782679 + MLT1F-int LTR MaLR 1107 1667 -68 231 273 76 0 chr2 106905277 106905343 -143782511 + MLT1F LTR MaLR 69 139 -403 869 116 0 0 chr2 106905346 106905475 -143782379 - AluSx SINE Alu 0 312 184 2029 172 93 41 chr2 106905475 106905935 -143781919 - LTR2B LTR ERV1 0 490 7 39742 67 8 3 chr2 106905936 106910910 -143776944 - Harlequin LTR ERV1 0 6896 1898 9639 78 67 29 chr2 106910894 106912269 -143775585 - Harlequin LTR ERV1 -5469 1427 1 * 1636 171 144 40 chr2 106912269 106912498 -143775356 - LTR2B LTR ERV1 0 490 286 186 43 0 0 chr2 106912498 106912521 -143775333 + (CAGAA)n Simple_repeat Simple_repeat 1 23 0 1636 171 144 40 chr2 106912521 106912735 -143775119 - LTR2B LTR ERV1 -204 286 1 1044 149 0 0 chr2 106912735 106912883 -143774971 - AluSx SINE Alu -130 182 35 494 268 251 53 chr2 106912883 106913182 -143774672 + MLT1F LTR MaLR 124 481 -61 5657 77 13 4 chr2 106913187 106913938 -143773916 + MER4E LTR ERV1 1 758 -8 5241 118 18 4 chr2 106914087 106914847 -143773007 - MER4E LTR ERV1 -8 771 1 424 275 23 88 chr2 106915728 106915990 -143771864 + MER21B LTR ERV1 8 252 -611 3849 101 16 51 chr2 106916011 106916624 -143771230 + LTR14B LTR ERVK 17 608 0 9114 89 2 0 chr2 106916624 106917803 -143770051 + HERVK14 LTR ERVK 1 1181 -4764 5853 91 20 11 chr2 106917789 106918573 -143769281 + HERVK14 LTR ERVK 1649 2439 -3506 * 3247 301 32 29 chr2 106918567 106920544 -143767310 + HERVK14C LTR ERVK 3528 7377 -25 * 3908 112 11 49 chr2 106920547 106921179 -143766675 + LTR14B LTR ERVK 1 608 0 873 276 93 57 chr2 106921181 106921623 -143766231 + MER21B LTR ERV1 271 728 -135 1898 153 17 10 chr2 106922064 106922358 -143765496 + AluSx SINE Alu 1 296 -16 2522 186 30 70 chr2 106924422 106925060 -143762794 + LTR9 LTR ERV1 1 612 0 2040 139 0 0 chr2 106926317 106926634 -143761220 - AluSx SINE Alu 0 319 3 432 211 48 10 chr2 106926637 106926741 -143761113 - L1MB8 LINE L1 -68 6608 6501 922 149 0 0 chr2 106926784 106926918 -143760936 + AluSg/x SINE Alu 162 295 -15 3456 182 36 28 chr2 106926972 106927687 -143760167 - L1MB8 LINE L1 -167 6509 5789 7329 232 36 11 chr2 106927709 106928318 -143759536 - L1MB8 LINE L1 -919 5725 5133 2257 124 0 3 chr2 106928318 106928616 -143759238 - AluSq SINE Alu -16 297 1 7329 232 36 11 chr2 106928616 106929930 -143757924 - L1MB8 LINE L1 -1511 5133 3754 959 216 4 74 chr2 106929943 106930174 -143757680 + MER58C DNA MER1_type 1 215 0 1782 257 86 56 chr2 106930179 106932239 -143755615 - L1MB8 LINE L1 -3439 3205 972 1001 187 46 49 chr2 106932682 106932933 -143754921 - MER31B LTR ERV1 0 661 411 2528 108 14 3 chr2 106932933 106933293 -143754561 + THE1B LTR MaLR 1 364 0 10943 110 31 1 chr2 106933293 106934827 -143753027 + THE1B-int LTR MaLR 1 1580 0 2702 113 3 0 chr2 106934827 106935190 -143752664 + THE1B LTR MaLR 1 364 0 1001 187 46 49 chr2 106935190 106935225 -143752629 - MER31B LTR ERV1 -247 414 182 3356 146 68 39 chr2 106935234 106935850 -143752004 - MER51A LTR ERV1 0 634 1 748 176 37 91 chr2 106935850 106936036 -143751818 - MER31B LTR ERV1 -290 176 1 1966 142 10 7 chr2 106936285 106936587 -143751267 + AluSx SINE Alu 1 303 -9 319 283 20 0 chr2 106936870 106936969 -143750885 - MER5A DNA MER1_type -6 183 83 435 288 50 90 chr2 106937126 106937240 -143750614 + MLT1I LTR MaLR 19 136 -273 2112 128 55 6 chr2 106937240 106937567 -143750287 + MER61A LTR ERV1 1 343 0 435 288 50 90 chr2 106937567 106937851 -143750003 + MLT1I LTR MaLR 136 401 -8 22 35 0 0 chr2 106938356 106938385 -143749469 + AT_rich Low_complexity Low_complexity 1 29 0 291 208 189 0 chr2 106939296 106939402 -143748452 - L1ME4a LINE L1 -30 6091 5966 2629 135 78 59 chr2 106939419 106939492 -143748362 - L1MA9 LINE L1 -80 6232 6162 4152 128 9 19 chr2 106939492 106939997 -143747857 + MER41B LTR ERV1 1 500 -135 1981 150 30 0 chr2 106939997 106940297 -143747557 - AluSx SINE Alu -3 309 1 4152 128 9 19 chr2 106940297 106940432 -143747422 + MER41B LTR ERV1 500 635 0 2629 135 78 59 chr2 106940432 106940778 -143747076 - L1MA9 LINE L1 -150 6162 5798 302 65 0 22 chr2 106940778 106940824 -143747030 + (TA)n Simple_repeat Simple_repeat 1 45 0 2629 135 78 59 chr2 106940824 106940943 -143746911 - L1MA9 LINE L1 -514 5798 5683 3133 106 4 9 chr2 106941783 106942235 -143745619 + LTR7 LTR ERV1 1 450 0 518 228 241 35 chr2 106942446 106942674 -143745180 - MLT1J LTR MaLR 0 511 237 1446 203 16 57 chr2 106942965 106943334 -143744520 + MER47A DNA MER2_type 13 366 0 1210 104 37 0 chr2 106943794 106943958 -143743896 - AluSq SINE Alu -15 298 129 310 276 109 19 chr2 106944081 106944237 -143743617 + MIR SINE MIR 23 192 -70 354 278 65 49 chr2 106944856 106945119 -143742735 + L1MC4a LINE L1 5060 5326 -820 989 247 183 39 chr2 106945128 106945346 -143742508 + L1MC4a LINE L1 5409 5594 -2214 2544 80 0 0 chr2 106945346 106945648 -143742206 + AluY SINE Alu 2 303 -8 989 247 183 39 chr2 106945648 106945851 -143742003 + L1MC4a LINE L1 5594 5767 -2041 1897 160 3 28 chr2 106945851 106946169 -143741685 + AluSx SINE Alu 1 310 -2 989 247 183 39 chr2 106946169 106946228 -143741626 + L1MC4a LINE L1 5767 5959 -1849 2133 126 8 67 chr2 106948153 106948511 -143739343 + MER1B DNA MER1_type 1 337 0 997 240 180 66 chr2 106948821 106949444 -143738410 - L1MC4a LINE L1 -1013 6795 6076 1824 156 0 17 chr2 106949444 106949746 -143738108 + AluJo SINE Alu 1 297 -15 997 240 180 66 chr2 106949746 106949850 -143738004 - L1MC4a LINE L1 -1732 6076 5985 1478 180 98 35 chr2 106949859 106950226 -143737628 - MLT1D LTR MaLR -112 393 4 546 200 6 11 chr2 106951266 106951446 -143736408 + CT-rich Low_complexity Low_complexity 2 180 0 445 295 47 21 chr2 106951806 106951996 -143735858 - MARNA DNA Mariner -163 423 229 498 352 14 9 chr2 106952393 106952612 -143735242 + L3 LINE CR1 1096 1315 -262 3345 145 12 24 chr2 106953533 106953742 -143734112 + L1PB4 LINE L1 5575 5785 -371 2317 103 0 0 chr2 106953742 106954054 -143733800 + AluSx SINE Alu 1 312 0 3345 145 12 24 chr2 106954054 106954430 -143733424 + L1PB4 LINE L1 5785 6153 -3 640 296 33 0 chr2 106955213 106955426 -143732428 - LTR67 LTR ERVL -12 545 326 261 233 0 0 chr2 106956211 106956271 -143731583 + MIR SINE MIR 67 126 -82 1174 186 70 20 chr2 106956363 106956427 -143731427 - L1ME3 LINE L1 -2 6160 6101 279 0 0 0 chr2 106956427 106956458 -143731396 + (CA)n Simple_repeat Simple_repeat 1 31 0 1174 186 70 20 chr2 106956458 106956694 -143731160 - L1ME3 LINE L1 -61 6101 5845 204 314 0 14 chr2 106956903 106956973 -143730881 + GA-rich Low_complexity Low_complexity 3 71 0 1812 154 0 10 chr2 106957656 106957948 -143729906 - AluJb SINE Alu -23 289 1 22 56 0 0 chr2 106957948 106957984 -143729870 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr2 106958152 106958180 -143729674 + AT_rich Low_complexity Low_complexity 1 28 0 1978 105 3 26 chr2 106958183 106958488 -143729366 - AluSx SINE Alu -14 298 1 1906 122 61 3 chr2 106958492 106958803 -143729051 - L1PA16 LINE L1 -9 6157 5829 2065 96 0 16 chr2 106958831 106959134 -143728720 + AluSq SINE Alu 1 298 -15 9138 183 96 53 chr2 106959212 106960568 -143727286 + L1MC3 LINE L1 5430 6726 -1059 1851 117 3 69 chr2 106960568 106960901 -143726953 + AluSx SINE Alu 1 311 -1 9138 183 96 53 chr2 106960901 106961136 -143726718 + L1MC3 LINE L1 6726 6949 -836 252 317 12 0 chr2 106961136 106961218 -143726636 + MLT1F1 LTR MaLR 35 117 -450 9138 183 96 53 chr2 106961218 106961596 -143726258 + L1MC3 LINE L1 6949 7309 -476 2150 113 3 0 chr2 106961596 106961898 -143725956 + AluSx SINE Alu 1 303 -9 9138 183 96 53 chr2 106961898 106962097 -143725757 + L1MC3 LINE L1 7309 7778 -7 1877 62 12 23 chr2 106963173 106963432 -143724422 + L1PA7 LINE L1 5896 6151 -3 756 230 52 0 chr2 106963452 106963626 -143724228 + MER5A DNA MER1_type 7 189 0 400 234 171 51 chr2 106963688 106963846 -143724008 - MER5B DNA MER1_type -1 177 1 737 163 111 58 chr2 106963893 106964065 -143723789 - MER5A DNA MER1_type -8 181 1 911 176 68 31 chr2 106964289 106964511 -143723343 + MLT1D LTR MaLR 4 233 -272 724 216 70 0 chr2 106964556 106964727 -143723127 + MLT1D LTR MaLR 317 499 -6 215 31 31 0 chr2 106964727 106964759 -143723095 + (TC)n Simple_repeat Simple_repeat 1 33 0 * 246 160 0 0 chr2 106964758 106964808 -143723046 + (CA)n Simple_repeat Simple_repeat 1 50 0 216 239 166 92 chr2 106964876 106965039 -143722815 - MIR SINE MIR -67 195 21 2079 125 7 0 chr2 106965816 106966120 -143721734 + AluSg SINE Alu 1 306 -4 586 241 80 19 chr2 106966534 106966651 -143721203 - MIR SINE MIR -25 237 129 2080 104 3 16 chr2 106966651 106966967 -143720887 - AluSx SINE Alu 0 312 1 586 241 80 19 chr2 106966967 106967061 -143720793 - MIR SINE MIR -133 129 13 285 327 173 0 chr2 106967228 106967338 -143720516 - MIR SINE MIR -131 131 3 221 325 58 0 chr2 106967338 106967452 -143720402 + MIR SINE MIR 142 262 0 1576 159 303 25 chr2 106968278 106968662 -143719192 + Charlie1 DNA MER1_type 2131 2407 -354 2136 91 28 0 chr2 106968662 106968949 -143718905 + AluSx SINE Alu 1 295 -17 1576 159 303 25 chr2 106968949 106969053 -143718801 + Charlie1 DNA MER1_type 2407 2755 -6 476 314 201 22 chr2 106969060 106969423 -143718431 - L3 LINE CR1 -45 1532 1105 1941 119 4 0 chr2 106969989 106970300 -143717554 + AluSg SINE Alu 1 312 0 182 378 118 0 chr2 106971737 106971856 -143715998 + MIR SINE MIR 111 243 -19 640 295 118 53 chr2 106972594 106973072 -143714782 + L2 LINE L2 2174 2687 -627 1655 165 7 0 chr2 106973072 106973386 -143714468 + AluJb SINE Alu 3 318 0 640 295 118 53 chr2 106973386 106973398 -143714456 + L2 LINE L2 2687 2697 -617 382 250 136 65 chr2 106973479 106973663 -143714191 - HAL1 LINE L1 -1486 1021 825 1594 243 80 23 chr2 106974081 106974566 -143713288 - L1M4 LINE L1 -922 5224 4695 1886 131 31 0 chr2 106974566 106974856 -143712998 - AluSx SINE Alu -13 299 1 1594 243 80 23 chr2 106974856 106974983 -143712871 - L1M4 LINE L1 -1451 4695 4577 803 278 61 41 chr2 106974985 106975348 -143712506 - L1MEc LINE L1 -4391 2005 1636 * 951 315 41 53 chr2 106975329 106976087 -143711767 - L1MEc LINE L1 -5621 775 27 1846 103 0 46 chr2 106976096 106976377 -143711477 + AluSg SINE Alu 21 288 -22 321 248 0 69 chr2 106976377 106976478 -143711376 - L1MC4 LINE L1 -1340 6702 6609 313 257 0 79 chr2 106976416 106976517 -143711337 + L1MC4 LINE L1 6614 6706 -1336 * 291 28 0 0 chr2 106976829 106976865 -143710989 + (TG)n Simple_repeat Simple_repeat 1 36 0 1885 127 46 0 chr2 106976931 106977215 -143710639 + AluSx SINE Alu 1 297 -15 693 36 0 0 chr2 106977226 106977310 -143710544 + (GGAA)n Simple_repeat Simple_repeat 1 84 0 1220 202 126 0 chr2 106977687 106977949 -143709905 - AluJo SINE Alu -7 295 1 219 330 136 0 chr2 106980557 106980660 -143707194 + L2 LINE L2 3151 3267 -5 352 197 139 41 chr2 106981534 106981755 -143706099 - MLT1H LTR MaLR -7 560 352 517 274 28 22 chr2 106982101 106982280 -143705574 + L1ME1 LINE L1 5594 5773 -393 806 246 182 35 chr2 106982460 106982972 -143704882 - LTR1B LTR ERV1 -207 619 33 1257 190 76 41 chr2 106982973 106983341 -143704513 + L1ME1 LINE L1 5781 6161 -5 1699 58 0 0 chr2 106984202 106984410 -143703444 + L1PA7 LINE L1 5939 6146 -8 238 240 200 48 chr2 106984606 106984731 -143703123 + MIR3 SINE MIR 3 146 -62 227 233 33 0 chr2 106986818 106986878 -143700976 - L2 LINE L2 -213 3059 2998 2067 243 49 11 chr2 106986880 106987414 -143700440 + MLT1H1 LTR MaLR 1 554 -1 2123 146 11 27 chr2 106987794 106988164 -143699690 - MLT1A1 LTR MaLR 0 365 2 384 230 56 24 chr2 106988241 106988367 -143699487 - L1MC5 LINE L1 -171 7790 7661 284 259 301 12 chr2 106988843 106989009 -143698845 - MIR SINE MIR 0 262 49 391 264 141 31 chr2 106989173 106989336 -143698518 + MER5A DNA MER1_type 9 189 0 2103 177 11 0 chr2 106989467 106989828 -143698026 + MLT1A1 LTR MaLR 1 365 0 2127 92 3 0 chr2 106990003 106990286 -143697568 - AluSx SINE Alu -18 294 11 1909 110 11 3 chr2 106990811 106991093 -143696761 + AluSq SINE Alu 1 284 -29 202 304 22 0 chr2 106991644 106991736 -143696118 + GA-rich Low_complexity Low_complexity 4 97 0 21 0 0 0 chr2 106991877 106991898 -143695956 + GC_rich Low_complexity Low_complexity 1 21 0 2143 100 0 42 chr2 106992405 106992715 -143695139 - AluSp SINE Alu -16 297 1 1830 119 7 40 chr2 106992770 106993073 -143694781 - AluJo SINE Alu -15 297 5 804 306 71 55 chr2 106993746 106994046 -143693808 - L3 LINE CR1 -7 1570 1276 959 87 11 33 chr2 106994046 106994230 -143693624 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 804 306 71 55 chr2 106994230 106994262 -143693592 - L3 LINE CR1 -301 1276 1246 2019 138 0 3 chr2 106994262 106994567 -143693287 - AluSx SINE Alu -8 304 1 804 306 71 55 chr2 106994567 106994905 -143692949 - L3 LINE CR1 -331 1246 888 623 229 8 0 chr2 106995060 106995191 -143692663 + MER94 DNA DNA 3 134 0 266 309 0 12 chr2 106995601 106995682 -143692172 - Charlie4a DNA MER1_type 0 508 429 255 215 163 21 chr2 106996084 106996228 -143691626 - MLT1C LTR MaLR -166 224 110 300 233 17 0 chr2 106996261 106996321 -143691533 + L1MEc LINE L1 2153 2213 -4183 351 213 138 11 chr2 106996324 106996427 -143691427 - MLT1C LTR MaLR -353 114 11 195 346 22 73 chr2 106997308 106997444 -143690410 + MIR SINE MIR 18 146 -62 199 273 68 34 chr2 106997873 106997961 -143689893 - L2 LINE L2 -10 3303 3213 318 279 18 45 chr2 106999840 106999951 -143687903 - L1ME LINE L1 -296 5825 5718 328 260 50 0 chr2 106999978 107000078 -143687776 - MIR SINE MIR -10 252 148 2104 107 3 3 chr2 107000371 107000670 -143687184 + AluSx SINE Alu 1 299 -13 2015 124 3 16 chr2 107000965 107001280 -143686574 + AluSq SINE Alu 1 311 -2 332 212 165 82 chr2 107001564 107001734 -143686120 - MER5A DNA MER1_type -5 184 1 301 324 101 7 chr2 107002008 107002147 -143685707 + L2 LINE L2 3121 3272 0 3372 123 58 11 chr2 107003944 107004513 -143683341 - L1MB3 LINE L1 -7 6176 5581 402 115 0 0 chr2 107004513 107004565 -143683289 + AluS SINE Alu 6 57 -243 1328 98 0 0 chr2 107004567 107004751 -143683103 + AluSg/x SINE Alu 123 306 -6 355 105 18 18 chr2 107004751 107004808 -143683046 - L1MB3 LINE L1 -575 5596 5540 2121 273 137 31 chr2 107004815 107006660 -143681194 - L1MEd LINE L1 -1978 4151 2111 527 313 106 18 chr2 107007128 107007458 -143680396 - L1MEd LINE L1 -4779 1531 1125 437 259 120 53 chr2 107007468 107007861 -143679993 - L1MEd LINE L1 -5173 946 528 1608 208 41 8 chr2 107008318 107008707 -143679147 - Charlie4a DNA MER1_type -70 438 37 190 356 76 25 chr2 107008872 107008990 -143678864 + L2 LINE L2 3186 3309 -4 294 252 72 45 chr2 107009034 107009145 -143678709 - MIR3 SINE MIR -48 160 47 1750 145 17 3 chr2 107009406 107009696 -143678158 - AluJo SINE Alu -17 295 2 467 246 42 30 chr2 107010001 107010168 -143677686 + L3 LINE CR1 1197 1365 -212 199 316 0 0 chr2 107010463 107010520 -143677334 - MIR SINE MIR -59 149 93 5607 227 114 35 chr2 107011457 107015083 -143672771 - L1MDa LINE L1 -2221 4319 170 2001 169 26 26 chr2 107015083 107015473 -143672381 - MLT1B LTR MaLR 0 390 1 5607 227 114 35 chr2 107015473 107015648 -143672206 - L1MDa LINE L1 -6370 170 10 1676 201 70 9 chr2 107016618 107016962 -143670892 - MLT1A1 LTR MaLR 0 365 1 23 0 0 0 chr2 107017406 107017429 -143670425 + AT_rich Low_complexity Low_complexity 1 23 0 260 247 169 0 chr2 107017429 107017506 -143670348 + L2 LINE L2 2454 2543 -771 467 283 16 0 chr2 107019716 107019896 -143667958 + L1MA10 LINE L1 5990 6329 -3 22 0 0 0 chr2 107019958 107019980 -143667874 + AT_rich Low_complexity Low_complexity 1 22 0 181 295 82 0 chr2 107020352 107020413 -143667441 + MIR3 SINE MIR 137 202 -6 201 254 64 55 chr2 107020521 107020631 -143667223 - L2 LINE L2 -17 3255 3145 259 242 0 13 chr2 107021112 107021261 -143666593 + (TG)n Simple_repeat Simple_repeat 1 147 0 301 323 0 0 chr2 107021277 107021404 -143666450 + (TG)n Simple_repeat Simple_repeat 1 127 0 421 268 176 13 chr2 107022507 107022660 -143665194 - MER5A DNA MER1_type -1 188 11 610 353 29 8 chr2 107025281 107025519 -143662335 + L3 LINE CR1 1250 1492 -85 239 135 0 77 chr2 107026213 107026265 -143661589 + L1MC5 LINE L1 7723 7770 -191 23 33 0 0 chr2 107029762 107029792 -143658062 + AT_rich Low_complexity Low_complexity 1 30 0 276 222 50 71 chr2 107030372 107030471 -143657383 + MER5B DNA MER1_type 75 171 -7 261 304 77 44 chr2 107030517 107030698 -143657156 + L2 LINE L2 2876 3062 -210 2301 71 3 0 chr2 107031196 107031493 -143656361 + AluSp SINE Alu 3 300 -13 212 274 0 0 chr2 107031956 107032007 -143655847 - MIR SINE MIR -62 146 96 2683 147 35 4 chr2 107034190 107034653 -143653201 + MER31A LTR ERV1 1 477 -8 315 355 120 0 chr2 107036054 107036237 -143651617 - L2 LINE L2 0 3313 3109 264 304 200 22 chr2 107036425 107036655 -143651199 - L2 LINE L2 -579 2735 2465 321 311 25 16 chr2 107036934 107037056 -143650798 + MIR SINE MIR 48 170 -92 234 164 16 16 chr2 107038823 107038884 -143648970 + L1ME4a LINE L1 6057 6117 -4 180 271 21 0 chr2 107041061 107041109 -143646745 + MIR SINE MIR 98 146 -62 3889 156 43 3 chr2 107041590 107042281 -143645573 + LTR62 LTR ERVK 1 719 0 2668 171 111 13 chr2 107042332 107042883 -143644971 + MER6A DNA MER2_type 1 605 0 190 200 17 83 chr2 107043702 107043762 -143644092 + MIR3 SINE MIR 150 205 -3 269 233 0 33 chr2 107046529 107046589 -143641265 + MIR SINE MIR 205 262 0 269 250 0 33 chr2 107046592 107046652 -143641202 + MIR SINE MIR 205 262 0 380 298 183 47 chr2 107047915 107048237 -143639617 + L1MC4a LINE L1 5367 5732 -389 2665 196 59 62 chr2 107052049 107052747 -143635107 - L1MD1 LINE L1 -7 6235 5540 1193 179 117 11 chr2 107053737 107054166 -143633688 + MLT2B1 LTR ERVL 1 519 -1 21 0 0 0 chr2 107056242 107056263 -143631591 + AT_rich Low_complexity Low_complexity 1 21 0 44270 29 21 1 chr2 107056283 107062316 -143625538 + L1PA2 LINE L1 1 6155 0 204 40 0 0 chr2 107062356 107062381 -143625473 + (A)n Simple_repeat Simple_repeat 1 25 0 2130 115 3 23 chr2 107062897 107063202 -143624652 + AluSq SINE Alu 1 299 -14 31 0 0 0 chr2 107063202 107063233 -143624621 + AT_rich Low_complexity Low_complexity 1 31 0 358 318 23 8 chr2 107066017 107066146 -143621708 + MIR SINE MIR 111 241 -21 231 305 49 0 chr2 107066417 107066499 -143621355 + L1MC4a LINE L1 5706 5791 -379 325 250 121 8 chr2 107066563 107066687 -143621167 + L1MC4a LINE L1 5777 5914 -1894 1937 146 41 0 chr2 107066841 107067136 -143620718 - AluJb SINE Alu -5 307 1 1903 170 0 3 chr2 107067253 107067559 -143620295 - AluSx SINE Alu -7 305 1 1058 253 7 3 chr2 107067754 107068039 -143619815 - L1M4 LINE L1 -3204 2942 2657 351 105 0 0 chr2 107068277 107068334 -143619520 + (TG)n Simple_repeat Simple_repeat 2 58 0 2136 77 0 4 chr2 107068554 107068826 -143619028 + AluY SINE Alu 41 311 0 1215 223 102 91 chr2 107068886 107069489 -143618365 - MLT1E2 LTR MaLR -5 621 32 1388 194 15 4 chr2 107070043 107070306 -143617548 - MLT1A1 LTR MaLR -99 266 1 2197 104 24 3 chr2 107071889 107072187 -143615667 + AluSx SINE Alu 6 309 -3 1017 177 39 33 chr2 107072238 107072260 -143615594 + MER49 LTR ERV1 1 21 -902 1731 157 54 0 chr2 107072260 107072540 -143615314 + AluSx SINE Alu 1 295 -17 1017 177 39 33 chr2 107072540 107072763 -143615091 + MER49 LTR ERV1 21 294 -629 372 228 0 0 chr2 107072802 107072881 -143614973 + LTR39 LTR ERV1 392 470 -313 635 160 0 0 chr2 107072881 107072987 -143614867 + AluJb SINE Alu 195 300 -12 1022 226 45 19 chr2 107072990 107073256 -143614598 + MER4D LTR ERV1 631 903 0 1652 174 105 11 chr2 107074715 107075077 -143612777 + MSTD LTR MaLR 1 396 0 4183 230 101 72 chr2 107075077 107076667 -143611187 + MSTD-int LTR MaLR 1 1636 -15 1723 131 157 12 chr2 107076680 107077024 -143610830 + MSTD LTR MaLR 1 394 -2 811 188 25 0 chr2 107077425 107077585 -143610269 + L1M4b LINE L1 12 175 -6684 1834 130 34 0 chr2 107077586 107077855 -143609999 + AluSx SINE Alu 35 312 0 378 219 0 25 chr2 107077855 107077974 -143609880 + GA-rich Low_complexity Low_complexity 1 116 0 331 134 0 62 chr2 107078102 107078199 -143609655 + (GAAA)n Simple_repeat Simple_repeat 4 94 0 303 225 345 7 chr2 107078199 107078341 -143609513 + L1M4b LINE L1 159 348 -6511 3888 206 109 67 chr2 107078356 107079100 -143608754 + L1M4b LINE L1 475 1186 -5771 195 42 0 0 chr2 107079100 107079124 -143608730 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 3888 206 109 67 chr2 107079124 107079349 -143608505 + L1M4b LINE L1 1186 1400 -5557 400 59 0 0 chr2 107079349 107079400 -143608454 - MADE1 DNA Mariner 0 80 30 3888 206 109 67 chr2 107079400 107079889 -143607965 + L1M4b LINE L1 1400 2161 -4796 1596 195 156 20 chr2 107079895 107080300 -143607554 + MLT1C LTR MaLR 6 465 -2 669 261 135 22 chr2 107080302 107080401 -143607453 + L1M4b LINE L1 2050 2136 -4823 2135 154 91 15 chr2 107080401 107080797 -143607057 - MSTB LTR MaLR 0 426 1 669 261 135 22 chr2 107080797 107081015 -143606839 + L1M4b LINE L1 2136 2403 -4556 1453 155 6 24 chr2 107081028 107081333 -143606521 + Tigger3(Golem) DNA MER2_type 2661 3038 0 2193 173 46 21 chr2 107081334 107082107 -143605747 + L1MB7 LINE L1 4838 5625 -559 1907 154 20 20 chr2 107082120 107082464 -143605390 + MER2 DNA MER2_type 1 344 0 1995 173 46 29 chr2 107082465 107082876 -143604978 + L1MB7 LINE L1 5767 6184 0 2249 216 87 20 chr2 107083048 107083603 -143604251 + L1MB7 LINE L1 5577 6168 -16 307 243 135 75 chr2 107084054 107084326 -143603528 + LTR8 LTR ERV1 1 281 -446 969 205 111 68 chr2 107084383 107084798 -143603056 + LTR8A LTR ERV1 288 720 -7 530 167 0 22 chr2 107086784 107086874 -143600980 - AluJ/FRAM SINE Alu -10 302 215 * 693 144 93 0 chr2 107086871 107086989 -143600865 - AluJo/FLAM SINE Alu -182 130 2 2068 139 75 21 chr2 107091844 107092231 -143595623 - LTR23 LTR ERV1 -27 410 3 505 213 123 0 chr2 107092294 107092416 -143595438 - FLAM_A SINE Alu -5 137 1 195 317 48 29 chr2 107092481 107092585 -143595269 - MIR3 SINE MIR -7 201 96 333 284 128 46 chr2 107093295 107093327 -143594527 + L1ME4a LINE L1 5581 5609 -512 4082 89 11 25 chr2 107093327 107093474 -143594380 + MER41A LTR ERV1 1 149 -405 2197 119 3 0 chr2 107093474 107093768 -143594086 + AluSq SINE Alu 1 295 -18 4082 89 11 25 chr2 107093768 107094182 -143593672 + MER41A LTR ERV1 149 554 0 333 284 128 46 chr2 107094182 107094476 -143593378 + L1ME4a LINE L1 5609 5934 -187 1518 169 46 14 chr2 107095014 107095298 -143592556 + AluJb SINE Alu 6 298 -14 33 0 0 0 chr2 107096657 107096690 -143591164 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr2 107098030 107098058 -143589796 + AT_rich Low_complexity Low_complexity 1 28 0 265 287 23 11 chr2 107098240 107098327 -143589527 + MER5A DNA MER1_type 76 163 -26 886 235 134 13 chr2 107098419 107098806 -143589048 + L2 LINE L2 2871 3304 -9 1868 151 31 10 chr2 107098874 107099165 -143588689 + AluJb SINE Alu 1 297 -15 1247 220 63 7 chr2 107099182 107099482 -143588372 - MER58B DNA MER1_type -24 317 1 185 266 62 31 chr2 107100378 107100442 -143587412 - MIR SINE MIR -65 143 78 188 175 18 105 chr2 107100693 107100750 -143587104 + L2 LINE L2 2399 2450 -864 631 280 165 46 chr2 107101033 107101511 -143586343 + MLT1H1 LTR MaLR 20 554 -1 2177 122 0 0 chr2 107102773 107103085 -143584769 - AluSx SINE Alu 0 312 1 1276 103 6 0 chr2 107103241 107103416 -143584438 + MLT1A1 LTR MaLR 176 351 -14 291 280 43 0 chr2 107103427 107103520 -143584334 + MER5A DNA MER1_type 93 189 0 234 233 0 0 chr2 107104020 107104080 -143583774 + (TATATG)n Simple_repeat Simple_repeat 2 61 0 323 268 0 82 chr2 107104089 107104186 -143583668 + L1MC4 LINE L1 6615 6703 -1339 207 188 0 0 chr2 107104186 107104234 -143583620 + (TG)n Simple_repeat Simple_repeat 2 49 0 2182 89 0 10 chr2 107105410 107105703 -143582151 + AluSg SINE Alu 1 290 -20 1799 129 14 3 chr2 107107021 107107316 -143580538 + AluSx SINE Alu 1 298 -14 893 116 254 0 chr2 107107744 107107925 -143579929 + MER30 DNA MER1_type 4 230 0 241 214 0 0 chr2 107108273 107108315 -143579539 + MIR SINE MIR 110 151 -111 180 0 0 0 chr2 107108825 107108845 -143579009 + (A)n Simple_repeat Simple_repeat 1 20 0 2171 111 0 13 chr2 107109494 107109810 -143578044 + AluSx SINE Alu 1 312 0 1903 167 58 9 chr2 107110026 107110374 -143577480 - MLT1A1 LTR MaLR 0 365 1 305 264 129 36 chr2 107110952 107111092 -143576762 - MER21B LTR ERV1 -53 810 658 328 250 36 0 chr2 107111202 107111286 -143576568 + MLT1D LTR MaLR 20 106 -399 240 303 101 8 chr2 107111593 107111712 -143576142 - MER21B LTR ERV1 -76 787 658 678 247 38 73 chr2 107111808 107112225 -143575629 + MLT1D LTR MaLR 5 390 0 302 268 60 18 chr2 107112232 107112421 -143575433 + L1MC5 LINE L1 7004 7221 -597 300 188 38 12 chr2 107112561 107112641 -143575213 + L1MC4 LINE L1 7470 7551 -491 305 309 21 10 chr2 107112646 107112743 -143575111 - L1MC4 LINE L1 -1344 6698 6601 1077 160 0 0 chr2 107112870 107113045 -143574809 + FRAM SINE Alu 1 170 -6 571 283 45 35 chr2 107113055 107113366 -143574488 + L1MC4 LINE L1 7689 8002 -40 2236 89 3 3 chr2 107113941 107114245 -143573609 - AluSq SINE Alu -9 304 1 511 241 321 32 chr2 107114568 107115070 -143572784 + HAL1 LINE L1 274 920 -1587 837 224 121 49 chr2 107115081 107115487 -143572367 + HAL1 LINE L1 991 1425 -1082 293 279 118 84 chr2 107115487 107115878 -143571976 - MLT1I LTR MaLR 0 409 6 1150 263 217 36 chr2 107115917 107116667 -143571187 + HAL1 LINE L1 1491 2412 -95 2257 87 10 0 chr2 107116667 107116967 -143570887 + AluSp SINE Alu 1 303 -10 1150 263 217 36 chr2 107116967 107117059 -143570795 + HAL1 LINE L1 2412 2486 -21 184 98 24 24 chr2 107117777 107117818 -143570036 + (CCTG)n Simple_repeat Simple_repeat 1 41 0 264 316 48 37 chr2 107117850 107118037 -143569817 + L2 LINE L2 2871 3059 -213 776 177 55 28 chr2 107118139 107118320 -143569534 + MER5A DNA MER1_type 1 186 -3 2461 40 0 7 chr2 107118477 107118775 -143569079 + AluY SINE Alu 2 297 -14 676 251 70 28 chr2 107118895 107119110 -143568744 + MIR SINE MIR 39 262 0 24 0 0 0 chr2 107120216 107120240 -143567614 + GC_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 107120281 107120310 -143567544 + GC_rich Low_complexity Low_complexity 1 29 0 186 43 0 0 chr2 107120505 107120528 -143567326 + (CGG)n Simple_repeat Simple_repeat 3 25 0 29 0 0 0 chr2 107120547 107120576 -143567278 + GC_rich Low_complexity Low_complexity 1 29 0 207 239 70 14 chr2 107121819 107121890 -143565964 + L3 LINE CR1 1395 1469 -108 359 248 21 78 chr2 107122869 107122938 -143564916 - MIR SINE MIR -6 256 197 1712 138 79 62 chr2 107122938 107123085 -143564769 + THE1C LTR MaLR 1 144 -231 2286 85 0 0 chr2 107123085 107123378 -143564476 - AluSx SINE Alu -19 293 1 1712 138 79 62 chr2 107123378 107123599 -143564255 + THE1C LTR MaLR 144 375 0 359 248 21 78 chr2 107123599 107123670 -143564184 - MIR SINE MIR -65 197 124 377 158 49 0 chr2 107123690 107123772 -143564082 - L1MA8 LINE L1 -4 6287 6202 1117 179 0 6 chr2 107123778 107123996 -143563858 - L1M3 LINE L1 -432 5739 5526 2228 116 0 0 chr2 107124660 107124971 -143562883 + AluSx SINE Alu 1 311 -1 398 256 51 26 chr2 107125445 107125562 -143562292 + LTR33A LTR ERVL 404 523 0 664 181 14 0 chr2 107125932 107126070 -143561784 - L1MC3 LINE L1 0 7785 7646 614 180 0 55 chr2 107126059 107126187 -143561667 - L1MC3 LINE L1 -464 7321 7201 * 290 308 0 0 chr2 107126196 107126287 -143561567 - MLT1F1 LTR MaLR -442 125 35 3645 144 69 26 chr2 107126287 107126966 -143560888 - L1MC3 LINE L1 -688 7097 6390 333 0 0 0 chr2 107127019 107127056 -143560798 + (CA)n Simple_repeat Simple_repeat 1 37 0 234 282 153 16 chr2 107127683 107127807 -143560047 + MER117 DNA MER1_type 1 141 -56 339 324 54 9 chr2 107128224 107128335 -143559519 - MER91B DNA MER1_type 0 190 75 212 200 18 0 chr2 107128335 107128390 -143559464 + (TA)n Simple_repeat Simple_repeat 2 57 0 259 181 167 0 chr2 107128390 107128462 -143559392 - MER91B DNA MER1_type -98 92 9 228 225 0 0 chr2 107128891 107128931 -143558923 - MARNA DNA Mariner -479 107 68 1845 126 38 7 chr2 107129404 107129697 -143558157 + L1MB2 LINE L1 5735 6036 -135 614 222 24 0 chr2 107129698 107129824 -143558030 + MER4C LTR ERV1 337 465 0 313 279 99 50 chr2 107130042 107130203 -143557651 + MIR SINE MIR 37 205 -57 188 259 0 56 chr2 107131943 107131997 -143555857 - MIR3 SINE MIR -12 196 146 1813 108 4 0 chr2 107132502 107132761 -143555093 - AluSp SINE Alu 0 313 54 277 361 33 0 chr2 107133004 107133126 -143554728 - MIR3 SINE MIR -76 132 7 * 355 146 0 0 chr2 107133114 107133169 -143554685 - L2 LINE L2 0 3272 3218 181 226 0 75 chr2 107133153 107133206 -143554648 + L2 LINE L2 3264 3312 -1 * 183 264 19 0 chr2 107134552 107134605 -143553249 - MIR SINE MIR -20 242 189 971 222 294 14 chr2 107134609 107135094 -143552760 - L2 LINE L2 -5 3308 2714 453 193 23 0 chr2 107135090 107135178 -143552676 - MIR SINE MIR -121 141 52 * 250 266 44 44 chr2 107135654 107135812 -143552042 + MER48 LTR ERV1 227 384 -3 288 0 0 0 chr2 107135840 107135872 -143551982 + (A)n Simple_repeat Simple_repeat 1 32 0 1142 154 0 20 chr2 107135872 107136073 -143551781 - AluJb SINE Alu -31 281 85 1854 133 19 10 chr2 107136652 107136961 -143550893 - AluSq SINE Alu -1 312 1 247 308 44 11 chr2 107137849 107137940 -143549914 - MIR3 SINE MIR -48 160 67 344 272 174 16 chr2 107138103 107138308 -143549546 + MIR SINE MIR 1 229 -33 2140 125 3 0 chr2 107139179 107139490 -143548364 + AluSp SINE Alu 1 312 -1 2628 195 61 0 chr2 107139498 107140088 -143547766 + L1 LINE L1 3165 3790 -2356 1561 108 0 0 chr2 107140088 107140300 -143547554 + AluSq SINE Alu 1 212 -101 215 219 0 0 chr2 107140590 107140631 -143547223 + (CACCAT)n Simple_repeat Simple_repeat 4 44 0 189 313 76 76 chr2 107140739 107140883 -143546971 - L2 LINE L2 -212 3060 2917 624 272 136 58 chr2 107140951 107141333 -143546521 - L1M4 LINE L1 -1145 5001 4590 2066 126 0 3 chr2 107141663 107141964 -143545890 + AluSx SINE Alu 1 300 -12 454 271 93 21 chr2 107142331 107142471 -143545383 - L2 LINE L2 -5 3308 3159 2101 125 29 5 chr2 107143081 107143457 -143544397 - L1 LINE L1 -1637 4509 4125 1026 282 62 60 chr2 107143770 107144220 -143543634 - MER21B LTR ERV1 -151 712 262 2491 41 23 73 chr2 107144370 107144713 -143543141 - LTR17 LTR ERV1 -454 326 1 2318 57 18 0 chr2 107144715 107144998 -143542856 - HERV17 LTR ERV1 -3 8623 8336 298 77 0 0 chr2 107144989 107145028 -143542826 - HERV17 LTR ERV1 -1078 7548 7510 * 9602 50 2 12 chr2 107145021 107145339 -143542515 - HERV17 LTR ERV1 -2607 6019 5699 2264 85 7 3 chr2 107145339 107145645 -143542209 - AluY SINE Alu -4 307 1 9602 50 2 12 chr2 107145645 107146487 -143541367 - HERV17 LTR ERV1 -2927 5699 4871 648 189 28 0 chr2 107146591 107146734 -143541120 + L1 LINE L1 2816 2962 -3184 1933 113 10 42 chr2 107146734 107146880 -143540974 + AluSc SINE Alu 1 150 -159 4098 103 9 46 chr2 107146880 107147509 -143540345 - LTR14B LTR ERVK 0 608 3 1933 113 10 42 chr2 107147509 107147672 -143540182 + AluSc SINE Alu 150 300 -9 2779 185 33 22 chr2 107147672 107147921 -143539933 + L1 LINE L1 2952 3197 -2949 2109 99 36 7 chr2 107147921 107148225 -143539629 + AluSp SINE Alu 1 313 0 2779 185 33 22 chr2 107148225 107148663 -143539191 + L1 LINE L1 3197 3647 -2499 1395 164 34 96 chr2 107148663 107149293 -143538561 - MER4C LTR ERV1 0 465 1 2448 174 58 31 chr2 107149293 107149522 -143538332 + L1 LINE L1 3644 3865 -2281 1532 158 50 20 chr2 107149522 107149819 -143538035 + AluJb SINE Alu 1 306 -6 2448 174 58 31 chr2 107149819 107150140 -143537714 + L1 LINE L1 3865 4209 -1937 2768 160 63 69 chr2 107150140 107150930 -143536924 + MER21A LTR ERV1 24 925 -6 468 211 55 0 chr2 107150950 107151059 -143536795 + L1MA5 LINE L1 3535 3649 -2497 565 148 0 11 chr2 107151059 107151147 -143536707 - MER4C LTR ERV1 -2 463 377 6288 141 12 18 chr2 107151187 107152610 -143535244 + L1MA5 LINE L1 4262 5687 -613 1934 109 84 0 chr2 107153250 107153524 -143534330 + AluSg SINE Alu 1 297 -13 3963 139 15 2 chr2 107154784 107155401 -143532453 + L1MA5 LINE L1 5676 6300 0 3858 222 48 107 chr2 107155407 107156076 -143531778 - L1 LINE L1 -1287 5095 4388 2025 147 3 0 chr2 107156076 107156368 -143531486 - AluSx SINE Alu -19 293 1 945 128 0 0 chr2 107156375 107156508 -143531346 - FLAM_C SINE Alu -10 133 1 3858 222 48 107 chr2 107156508 107156702 -143531152 - L1 LINE L1 -2000 4382 4178 2039 115 0 7 chr2 107156702 107157029 -143530825 - AluSx SINE Alu 0 325 1 3858 222 48 107 chr2 107157029 107157240 -143530614 - L1 LINE L1 -2204 4178 3956 2412 92 3 0 chr2 107157240 107157546 -143530308 - AluSx SINE Alu -5 307 1 3858 222 48 107 chr2 107157546 107157998 -143529856 - L1 LINE L1 -2426 3956 3525 210 37 0 0 chr2 107158315 107158342 -143529512 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1697 134 10 48 chr2 107158834 107158930 -143528924 - MSTA LTR MaLR -147 281 183 2824 22 0 0 chr2 107158930 107159241 -143528613 - AluYa5 SINE Alu 0 311 1 1697 134 10 48 chr2 107159241 107159436 -143528418 - MSTA LTR MaLR -245 183 1 210 250 91 45 chr2 107159549 107159637 -143528217 - L2 LINE L2 -1 3312 3221 435 290 151 42 chr2 107160145 107160576 -143527278 - MLT1L LTR MaLR -1 614 137 2445 74 0 0 chr2 107160930 107161228 -143526626 + AluY SINE Alu 1 298 -13 241 347 21 0 chr2 107161501 107161596 -143526258 + MLT2E LTR ERVL 77 173 -455 216 67 0 0 chr2 107161949 107161979 -143525875 + (CA)n Simple_repeat Simple_repeat 1 30 0 816 274 81 36 chr2 107162001 107162471 -143525383 - L1ME4a LINE L1 -104 6017 5527 3788 210 50 19 chr2 107162866 107164476 -143523378 - L1 LINE L1 -2847 3535 1770 2046 143 3 0 chr2 107164743 107165050 -143522804 + AluSg SINE Alu 1 308 -2 1797 152 0 46 chr2 107165373 107165696 -143522158 + AluJb SINE Alu 1 308 -4 687 130 0 0 chr2 107165736 107165828 -143522026 + AluSx SINE Alu 2 93 -219 2164 117 7 0 chr2 107165829 107166127 -143521727 + AluSg SINE Alu 1 300 -10 1460 128 5 0 chr2 107166127 107166401 -143521453 + AluSx SINE Alu 80 355 0 1149 108 60 0 chr2 107166798 107166964 -143520890 + AluSg/x SINE Alu 137 312 0 444 319 65 17 chr2 107167012 107167115 -143520739 + L1ME LINE L1 5448 5545 -576 225 0 0 0 chr2 107167115 107167140 -143520714 + (TG)n Simple_repeat Simple_repeat 2 26 0 444 319 65 17 chr2 107167140 107167395 -143520459 + L1ME LINE L1 5545 5820 -301 2220 70 0 0 chr2 107167404 107167676 -143520178 + AluY SINE Alu 1 272 -39 2191 114 0 7 chr2 107168354 107168653 -143519201 - AluSq SINE Alu -16 297 1 2044 133 0 3 chr2 107169150 107169444 -143518410 - AluSx SINE Alu -19 293 1 290 274 60 42 chr2 107170031 107170199 -143517655 - L2 LINE L2 -168 3104 2934 2283 110 3 3 chr2 107170374 107170712 -143517142 - AluSx SINE Alu 0 338 1 2269 108 0 52 chr2 107170927 107171252 -143516602 - AluSx SINE Alu -4 308 1 853 153 0 0 chr2 107171254 107171408 -143516446 - AluSg/x SINE Alu 0 312 163 2319 119 0 0 chr2 107172090 107172402 -143515452 - AluSq SINE Alu -1 312 1 1311 142 0 52 chr2 107172414 107172614 -143515240 - AluSg/x SINE Alu -7 303 115 183 42 0 0 chr2 107172614 107172638 -143515216 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1311 142 0 52 chr2 107172638 107172670 -143515184 - AluSg/x SINE Alu -195 115 83 341 68 0 0 chr2 107172670 107172714 -143515140 - AluSg SINE Alu -52 250 207 1147 88 0 14 chr2 107172715 107172862 -143514992 - AluSg SINE Alu -165 145 1 2371 84 0 19 chr2 107172957 107173268 -143514586 - AluSg SINE Alu -5 305 1 180 311 22 56 chr2 107173404 107173494 -143514360 + L3 LINE CR1 1388 1474 -103 1261 242 76 44 chr2 107173731 107174140 -143513714 - L1MC4 LINE L1 -1081 6961 6540 264 231 123 0 chr2 107174144 107174209 -143513645 - Tigger2 DNA MER2_type -10 2708 2636 * 410 169 70 0 chr2 107174203 107174274 -143513580 + Tigger2 DNA MER2_type 400 475 -2243 2152 105 8 92 chr2 107174583 107174753 -143513101 - Tigger2 DNA MER2_type -1 2717 2592 2012 119 0 3 chr2 107174753 107175067 -143512787 - AluSx SINE Alu 0 313 1 2152 105 8 92 chr2 107175067 107175265 -143512589 - Tigger2 DNA MER2_type -126 2592 2379 2110 174 8 19 chr2 107176120 107176487 -143511367 + MLT1A1 LTR MaLR 1 363 -2 321 89 0 0 chr2 107177262 107177307 -143510547 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 1908 137 30 110 chr2 107177378 107177708 -143510146 - L1MA4 LINE L1 0 6300 5971 236 253 129 43 chr2 107177708 107177894 -143509960 - L1MC4 LINE L1 -2037 6005 5804 418 275 169 34 chr2 107178501 107178708 -143509146 + MIR SINE MIR 8 242 -20 1950 110 0 83 chr2 107178769 107179105 -143508749 + AluSc SINE Alu 1 308 -1 195 69 0 0 chr2 107179108 107179137 -143508717 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 909 197 16 37 chr2 107179374 107179562 -143508292 - MER5A DNA MER1_type -5 184 1 2537 54 3 0 chr2 107180050 107180346 -143507508 + AluY SINE Alu 1 297 -14 327 163 0 0 chr2 107180356 107180405 -143507449 + AluS SINE Alu 230 278 -22 262 330 10 0 chr2 107181038 107181135 -143506719 + (CAGGG)n Simple_repeat Simple_repeat 3 100 0 274 297 143 29 chr2 107182099 107182308 -143505546 + L2 LINE L2 3081 3313 0 1696 219 66 82 chr2 107184631 107185253 -143502601 - LTR9 LTR ERV1 0 612 1 3581 96 56 6 chr2 107185649 107186149 -143501705 + LTR17 LTR ERV1 256 780 0 9573 110 16 38 chr2 107186149 107187656 -143500198 + HERV17 LTR ERV1 1 1474 -7152 * 12274 50 5 1 chr2 107187627 107189085 -143498769 + HERV17 LTR ERV1 2490 3953 -4673 7282 131 9 3 chr2 107189185 107190956 -143496898 + L1MA3 LINE L1 4522 6304 -1 831 259 65 18 chr2 107191974 107192252 -143495602 + MLT1E1 LTR MaLR 3 293 -361 227 268 24 49 chr2 107192393 107192475 -143495379 - L3 LINE CR1 -82 1495 1416 188 241 76 63 chr2 107192612 107192691 -143495163 - MIR3 SINE MIR -15 193 114 2146 75 0 0 chr2 107193068 107193335 -143494519 + AluY SINE Alu 30 296 -15 30 59 0 0 chr2 107193615 107193666 -143494188 + AT_rich Low_complexity Low_complexity 1 51 0 2143 102 0 54 chr2 107193690 107194003 -143493851 - AluSx SINE Alu -5 307 12 2093 121 3 7 chr2 107194025 107194331 -143493523 - AluSc SINE Alu -3 306 2 2385 101 3 0 chr2 107194867 107195174 -143492680 - AluSq SINE Alu -5 308 1 2314 138 85 5 chr2 107195604 107196004 -143491850 - MSTB1 LTR MaLR 0 432 1 5201 158 44 51 chr2 107196410 107196634 -143491220 - L1MC2 LINE L1 -1 6343 6119 2326 107 0 0 chr2 107196634 107196933 -143490921 - AluSx SINE Alu -13 299 1 5201 158 44 51 chr2 107196933 107197246 -143490608 - L1MC2 LINE L1 -225 6119 5805 1632 202 3 0 chr2 107197246 107197557 -143490297 + AluJb SINE Alu 7 312 0 5201 158 44 51 chr2 107197557 107198110 -143489744 - L1MC2 LINE L1 -539 5805 5260 * 5465 124 45 1 chr2 107198108 107199028 -143488826 + L1PA16 LINE L1 5192 6166 0 6502 242 55 34 chr2 107199036 107199372 -143488482 - L1MC2 LINE L1 -864 5282 4955 189 0 0 0 chr2 107199372 107199393 -143488461 + (TA)n Simple_repeat Simple_repeat 1 21 0 2139 115 0 3 chr2 107199393 107199679 -143488175 - AluSg SINE Alu -10 300 16 1729 191 0 3 chr2 107199681 107199979 -143487875 - AluJb SINE Alu -15 297 1 6502 242 55 34 chr2 107199979 107200885 -143486969 - L1MC2 LINE L1 -1191 4955 4070 2203 118 0 3 chr2 107200885 107201189 -143486665 - AluSx SINE Alu -9 303 1 6502 242 55 34 chr2 107201189 107202486 -143485368 - L1MC2 LINE L1 -2076 4070 2272 665 220 93 19 chr2 107202506 107202720 -143485134 - L1MC5 LINE L1 -31 7930 7701 21 57 0 0 chr2 107202738 107202773 -143485081 + AT_rich Low_complexity Low_complexity 1 35 0 29 70 0 0 chr2 107202790 107202847 -143485007 + AT_rich Low_complexity Low_complexity 1 57 0 * 2817 205 49 35 chr2 107202841 107202876 -143484978 - L1MB4 LINE L1 -1 6179 6146 180 97 0 0 chr2 107202876 107202907 -143484947 + (T)n Simple_repeat Simple_repeat 1 31 0 2235 126 3 0 chr2 107202877 107203186 -143484668 - AluSx SINE Alu 0 312 3 2817 205 49 35 chr2 107203186 107203636 -143484218 - L1MB4 LINE L1 -313 5867 5675 2075 154 3 3 chr2 107203636 107203948 -143483906 - AluSx SINE Alu 0 312 1 2817 205 49 35 chr2 107203948 107204249 -143483605 - L1MB4 LINE L1 -505 5675 5380 2389 92 3 3 chr2 107204272 107204578 -143483276 - AluSp SINE Alu -7 306 1 12383 166 98 13 chr2 107204581 107207041 -143480813 + L1M1 LINE L1 74 2744 -4821 1469 85 0 0 chr2 107207041 107207218 -143480636 + AluY SINE Alu 1 177 -134 3543 125 114 36 chr2 107207218 107208317 -143479537 - MER11A LTR ERVK 0 1236 2 1071 83 0 0 chr2 107208317 107208449 -143479405 + AluY SINE Alu 171 302 -9 2260 118 3 3 chr2 107208449 107208806 -143479048 + L1M1 LINE L1 2734 3090 -4475 1381 186 4 36 chr2 107208906 107209159 -143478695 + AluJo SINE Alu 41 285 -27 219 69 0 0 chr2 107209161 107209190 -143478664 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 2307 148 9 37 chr2 107209190 107209979 -143477875 + L1M1 LINE L1 3346 4109 -3456 2193 91 3 41 chr2 107210084 107210172 -143477682 - MER48 LTR ERV1 -61 326 236 2528 49 3 3 chr2 107210172 107210477 -143477377 - AluY SINE Alu -6 305 1 2193 91 3 41 chr2 107210477 107210727 -143477127 - MER48 LTR ERV1 -151 236 1 495 276 173 7 chr2 107210727 107210999 -143476855 + L1MC4a LINE L1 6291 6607 -1201 826 145 0 0 chr2 107211001 107211118 -143476736 + FLAM_C SINE Alu 1 117 -26 1038 245 49 12 chr2 107211134 107211461 -143476393 + L1MC4 LINE L1 6628 6966 -1076 1600 166 38 4 chr2 107211550 107211815 -143476039 + AluJb SINE Alu 33 306 -6 990 271 73 41 chr2 107212651 107212998 -143474856 + L1MC4a LINE L1 5462 5548 -785 1614 150 112 0 chr2 107212998 107213265 -143474589 + AluSg SINE Alu 1 297 -13 990 271 73 41 chr2 107213265 107213373 -143474481 + L1MC4a LINE L1 5548 5651 -682 2111 107 10 3 chr2 107213557 107213848 -143474006 + AluSg SINE Alu 1 293 -17 2221 229 41 62 chr2 107215848 107216572 -143471282 - MER21B LTR ERV1 -154 709 1 1193 235 62 27 chr2 107216712 107217091 -143470763 + LTR10C LTR ERV1 186 591 -42 293 287 35 11 chr2 107217105 107217147 -143470707 + MER5B DNA MER1_type 88 128 -50 231 103 0 0 chr2 107217147 107217186 -143470668 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 293 287 35 11 chr2 107217186 107217230 -143470624 + MER5B DNA MER1_type 128 176 -2 378 284 142 35 chr2 107217253 107217320 -143470534 - MLT1L LTR MaLR -4 611 553 2233 132 0 0 chr2 107217320 107217623 -143470231 + AluSg SINE Alu 1 303 -7 378 284 142 35 chr2 107217623 107217809 -143470045 - MLT1L LTR MaLR -62 553 331 2144 139 0 3 chr2 107218145 107218318 -143469536 - AluSx SINE Alu -3 309 136 2453 94 3 0 chr2 107218318 107218625 -143469229 - AluSp SINE Alu -5 308 1 2144 139 0 3 chr2 107218625 107218761 -143469093 - AluSx SINE Alu -176 136 1 667 300 84 30 chr2 107218982 107219412 -143468442 - L1MC4a LINE L1 -1954 5854 5402 2595 64 0 0 chr2 107219582 107219893 -143467961 - AluY SINE Alu 0 311 1 893 155 6 6 chr2 107219895 107220056 -143467798 - FRAM SINE Alu -8 168 8 213 226 129 73 chr2 107220494 107220618 -143467236 + L2 LINE L2 3142 3272 0 191 301 227 6 chr2 107220730 107220893 -143466961 + MIR SINE MIR 25 223 -39 2224 98 0 3 chr2 107220894 107221221 -143466633 + AluSg1 SINE Alu 1 326 0 812 210 47 128 chr2 107221326 107221507 -143466347 - LTR48B LTR ERV1 -13 631 437 2187 125 0 3 chr2 107221507 107221803 -143466051 + AluSx SINE Alu 1 295 -17 812 210 47 128 chr2 107221803 107222044 -143465810 - LTR48B LTR ERV1 -207 437 243 608 223 9 0 chr2 107222072 107222184 -143465670 - FLAM_C SINE Alu -25 118 6 272 213 67 0 chr2 107222288 107222363 -143465491 - MER34 LTR ERV1 -439 103 24 765 190 38 6 chr2 107222455 107222613 -143465241 - MER53 DNA DNA -7 182 20 286 364 8 16 chr2 107222808 107222937 -143464917 + MER5B DNA MER1_type 51 178 0 2211 85 14 10 chr2 107223370 107223663 -143464191 - AluSg SINE Alu -14 296 3 2241 104 7 3 chr2 107223725 107224022 -143463832 - AluSx SINE Alu -11 301 4 1123 264 175 25 chr2 107224049 107224639 -143463215 - L1ME3A LINE L1 -9 6161 5484 208 318 195 7 chr2 107224832 107224986 -143462868 - MIR SINE MIR -1 261 79 31 0 0 0 chr2 107225023 107225054 -143462800 + AT_rich Low_complexity Low_complexity 1 31 0 236 277 78 85 chr2 107225237 107225378 -143462476 - MER5A DNA MER1_type 0 189 50 180 111 0 0 chr2 107225643 107225670 -143462184 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1619 207 38 54 chr2 107225671 107225722 -143462132 - MER82 DNA MER2_type -1 652 602 2208 106 0 3 chr2 107225722 107226015 -143461839 - AluSg1 SINE Alu -17 292 1 1619 207 38 54 chr2 107226015 107226388 -143461466 - MER82 DNA MER2_type -51 602 235 268 300 93 20 chr2 107227449 107227599 -143460255 - L2 LINE L2 0 3313 3153 350 169 133 0 chr2 107229834 107229917 -143457937 + HAL1b LINE L1 514 607 -741 1263 137 5 29 chr2 107229925 107230130 -143457724 + AluJo SINE Alu 96 295 -17 797 269 91 20 chr2 107230135 107230477 -143457377 + HAL1b LINE L1 615 980 -368 255 274 126 14 chr2 107331259 107331482 -143356372 + LTR16C LTR ERVL 152 399 -92 189 0 0 0 chr2 107332574 107332595 -143355259 + (TG)n Simple_repeat Simple_repeat 1 21 0 583 98 0 88 chr2 107332609 107332803 -143355051 + (CAGAGA)n Simple_repeat Simple_repeat 4 180 0 266 103 0 0 chr2 107333388 107333427 -143354427 + (A)n Simple_repeat Simple_repeat 1 39 0 381 286 77 60 chr2 107333958 107334322 -143353532 - L1MC/D LINE L1 -2148 5660 5291 1741 171 60 69 chr2 107335142 107335739 -143352115 + pTR5 LTR ERV1 748 1339 -1099 3784 160 56 81 chr2 107335788 107336631 -143351223 + LTR12 LTR ERV1 5 826 0 275 64 0 21 chr2 107337492 107337539 -143350315 + (TATG)n Simple_repeat Simple_repeat 3 48 0 1084 197 34 34 chr2 107337548 107337782 -143350072 - AluJo SINE Alu -39 273 40 1861 168 105 5 chr2 107337978 107338378 -143349476 - L1MA6 LINE L1 -9 6291 5852 2122 100 3 38 chr2 107338731 107339050 -143348804 + AluY SINE Alu 1 308 -3 263 183 33 17 chr2 107339209 107339269 -143348585 - Charlie7 DNA MER1_type -47 2565 2505 333 255 261 21 chr2 107339327 107339515 -143348339 - Charlie7 DNA MER1_type -1890 722 490 1053 63 0 0 chr2 107339516 107339643 -143348211 + AluY SINE Alu 169 295 -16 383 271 8 8 chr2 107339674 107339792 -143348062 - Charlie7 DNA MER1_type -2136 476 359 1049 284 97 12 chr2 107340154 107340714 -143347140 - L2 LINE L2 -5 3308 2702 551 185 28 9 chr2 107340720 107340828 -143347026 - FRAM SINE Alu -72 104 1 814 229 188 0 chr2 107341430 107341670 -143346184 + MSTD LTR MaLR 112 396 0 201 275 0 0 chr2 107341726 107341766 -143346088 + MER91B DNA MER1_type 24 63 -127 224 185 0 15 chr2 107341885 107341924 -143345930 + (CCTAT)n Simple_repeat Simple_repeat 3 42 -24 2373 178 29 12 chr2 107341924 107342341 -143345513 - MSTB LTR MaLR -2 424 1 224 185 0 15 chr2 107342341 107342366 -143345488 + (CCTAT)n Simple_repeat Simple_repeat 42 66 0 2100 134 10 0 chr2 107342392 107342699 -143345155 + AluSx SINE Alu 1 310 -2 367 150 0 211 chr2 107342720 107342867 -143344987 - MLT2F LTR ERVL -10 618 503 774 321 104 36 chr2 107342960 107343433 -143344421 - MLT2F LTR ERVL -153 510 6 816 188 62 6 chr2 107343457 107343617 -143344237 - MER63 DNA MER1_type 0 1062 894 417 333 102 31 chr2 107343701 107344121 -143343733 - L1ME LINE L1 -5609 461 12 266 275 11 11 chr2 107344256 107344347 -143343507 - HAL1 LINE L1 -1043 1464 1374 1569 200 107 19 chr2 107344386 107344739 -143343115 - L1MD2 LINE L1 -19 6340 5945 1122 155 23 45 chr2 107344739 107345004 -143342850 - L1MA4 LINE L1 0 6300 6042 1569 200 107 19 chr2 107345004 107345060 -143342794 - L1MD2 LINE L1 -414 5945 5895 47 19 0 0 chr2 107345062 107345116 -143342738 + AT_rich Low_complexity Low_complexity 1 54 0 275 299 30 69 chr2 107346012 107346138 -143341716 - L1MEd LINE L1 -4979 1140 1011 2320 129 31 14 chr2 107346138 107346494 -143341360 - THE1B LTR MaLR -2 362 1 275 299 30 69 chr2 107346494 107346701 -143341153 - L1MEd LINE L1 -5108 1011 820 338 297 86 23 chr2 107347351 107347479 -143340375 + MIR SINE MIR 83 218 -44 1083 272 89 22 chr2 107347609 107347969 -143339885 - MLT1I LTR MaLR 0 409 26 236 242 20 7 chr2 107349112 107349261 -143338593 + (TATG)n Simple_repeat Simple_repeat 1 151 0 182 167 0 24 chr2 107349331 107349373 -143338481 + (TATG)n Simple_repeat Simple_repeat 3 43 0 321 274 76 6 chr2 107349458 107349615 -143338239 - L1M4 LINE L1 -1406 5551 5384 374 220 172 43 chr2 107349617 107349679 -143338175 - L1M4 LINE L1 -2606 4351 4298 2294 103 3 7 chr2 107349679 107349989 -143337865 - AluY SINE Alu -2 309 1 374 220 172 43 chr2 107349989 107350112 -143337742 - L1M4 LINE L1 -2659 4298 4142 * 3852 216 21 43 chr2 107350108 107351772 -143336082 - L1MB8 LINE L1 0 6178 4551 2015 197 62 2 chr2 107351773 107351973 -143335881 - MSTB LTR MaLR -1 425 238 194 0 39 0 chr2 107351973 107351999 -143335855 + (GA)n Simple_repeat Simple_repeat 1 27 0 2015 197 62 2 chr2 107351999 107352199 -143335655 - MSTB LTR MaLR -188 238 1 8750 200 28 3 chr2 107352204 107353809 -143334045 - MSTB-int LTR MaLR -6 1645 1 2293 163 57 7 chr2 107353810 107354215 -143333639 - MSTB LTR MaLR -1 425 1 1192 256 47 49 chr2 107354323 107354748 -143333106 - L1M4 LINE L1 -6435 424 1 720 316 18 0 chr2 107354830 107355055 -143332799 - L2 LINE L2 -854 2460 2232 201 313 0 75 chr2 107355660 107355698 -143332156 + L2 LINE L2 3239 3270 -43 1855 175 143 8 chr2 107355698 107356075 -143331779 - MSTA LTR MaLR 0 428 1 201 313 0 75 chr2 107356075 107356116 -143331738 + L2 LINE L2 3269 3312 -1 21 0 0 0 chr2 107356566 107356587 -143331267 + AT_rich Low_complexity Low_complexity 1 21 0 1130 184 5 9 chr2 107357365 107357577 -143330277 + MER2 DNA MER2_type 1 211 -134 505 213 71 0 chr2 107358295 107358436 -143329418 - MER58B DNA MER1_type 0 341 191 914 203 18 14 chr2 107359462 107359679 -143328175 - MLT1A1 LTR MaLR 0 365 148 1242 169 84 55 chr2 107359703 107359976 -143327878 - AluJo SINE Alu -23 289 9 876 111 26 7 chr2 107359981 107360134 -143327720 - MLT1A1 LTR MaLR -208 157 2 341 299 98 107 chr2 107360151 107360250 -143327604 - L2 LINE L2 -4 3268 3170 306 0 0 0 chr2 107360250 107360284 -143327570 + (CA)n Simple_repeat Simple_repeat 2 35 0 341 299 98 107 chr2 107360284 107360745 -143327109 - L2 LINE L2 -102 3170 2717 2305 213 63 4 chr2 107360745 107361256 -143326598 + MER87 LTR ERV1 1 541 0 341 299 98 107 chr2 107361256 107361420 -143326434 - L2 LINE L2 -555 2717 2553 351 340 102 10 chr2 107361423 107361620 -143326234 - L2 LINE L2 -973 2341 2127 379 291 7 0 chr2 107361628 107361769 -143326085 - L1M4c LINE L1 -5032 1927 1786 3276 267 37 34 chr2 107361808 107362882 -143324972 - L1M4c LINE L1 -5771 1088 11 271 214 170 44 chr2 107363024 107363183 -143324671 - L2 LINE L2 -1352 1962 1784 23 54 0 0 chr2 107363184 107363221 -143324633 + AT_rich Low_complexity Low_complexity 1 37 0 477 269 58 50 chr2 107363630 107363924 -143323930 - L1MC/D LINE L1 -637 5527 5425 1880 171 3 3 chr2 107363924 107364234 -143323620 - AluJb SINE Alu -2 310 1 477 269 58 50 chr2 107364234 107364560 -143323294 - L1MC/D LINE L1 -739 5425 5103 550 280 117 67 chr2 107364955 107365358 -143322496 - L2 LINE L2 -1758 1556 1134 4791 188 57 18 chr2 107366607 107368445 -143319409 - L1MC2 LINE L1 -6 6618 4708 3072 159 44 35 chr2 107368486 107368650 -143319204 + L1MA7 LINE L1 5616 5777 -514 251 28 28 0 chr2 107368650 107368686 -143319168 + (CA)n Simple_repeat Simple_repeat 2 38 0 3072 159 44 35 chr2 107368686 107369180 -143318674 + L1MA7 LINE L1 5777 6280 -11 1050 179 113 68 chr2 107369232 107369656 -143318198 - LTR7 LTR ERV1 -7 443 1 * 2171 209 48 33 chr2 107369656 107370173 -143317681 - MER74A LTR ERVL -14 544 20 3412 227 28 9 chr2 107370187 107371117 -143316737 - L1MC2 LINE L1 -1699 4727 3780 23 33 0 0 chr2 107371132 107371162 -143316692 + AT_rich Low_complexity Low_complexity 1 30 0 1124 146 21 17 chr2 107371169 107371402 -143316452 - L1M4 LINE L1 -2116 4030 3797 3525 240 54 15 chr2 107371431 107372906 -143314948 - L1MC2 LINE L1 -2685 3741 2207 2221 96 3 0 chr2 107372917 107373240 -143314614 + AluSc SINE Alu 1 324 0 21 36 0 0 chr2 107373296 107373324 -143314530 + AT_rich Low_complexity Low_complexity 1 28 0 456 174 0 0 chr2 107373438 107373530 -143314324 - L1MA4A LINE L1 -24 6279 6188 390 347 61 6 chr2 107373718 107374044 -143313810 - L1ME4a LINE L1 -266 5855 5512 21 0 0 0 chr2 107374230 107374251 -143313603 + AT_rich Low_complexity Low_complexity 1 21 0 4268 232 41 62 chr2 107376495 107377743 -143310111 - L1MC4a LINE L1 -1 7807 6598 555 54 33 0 chr2 107377743 107377835 -143310019 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 4268 232 41 62 chr2 107377835 107378195 -143309659 - L1MC4a LINE L1 -1210 6598 6232 2115 116 3 10 chr2 107378195 107378489 -143309365 - AluSg SINE Alu -1 309 18 3202 98 78 0 chr2 107379111 107379572 -143308282 + LOR1a LTR ERV1 1 497 0 1287 180 19 90 chr2 107379831 107379973 -143307881 + MER2 DNA MER2_type 1 152 -193 2492 76 0 22 chr2 107379973 107380287 -143307567 - AluY SINE Alu -4 307 1 1287 180 19 90 chr2 107380287 107380510 -143307344 + MER2 DNA MER2_type 152 340 -5 1111 228 201 20 chr2 107382242 107382699 -143305155 - MLT1H LTR MaLR -9 540 1 1235 151 9 9 chr2 107383053 107383278 -143304576 + LOR1a LTR ERV1 1 225 -272 1457 175 15 4 chr2 107383368 107383631 -143304223 + LOR1a LTR ERV1 232 497 0 637 93 19 0 chr2 107383891 107383998 -143303856 + (TCTA)n Simple_repeat Simple_repeat 4 112 0 449 325 18 18 chr2 107384032 107384195 -143303659 + MIR SINE MIR 28 190 -72 293 250 0 33 chr2 107385393 107385485 -143302369 + CT-rich Low_complexity Low_complexity 2 90 0 2635 150 47 2 chr2 107385635 107386082 -143301772 + MLT1C LTR MaLR 1 467 0 465 279 36 0 chr2 107386377 107386488 -143301366 + L2 LINE L2 3192 3306 -7 795 250 11 0 chr2 107387043 107387219 -143300635 + MER45A DNA AcHobo 1 178 0 2339 104 0 0 chr2 107387911 107388208 -143299646 + AluSg SINE Alu 1 297 -13 341 346 45 20 chr2 107388606 107388808 -143299046 + MIR3 SINE MIR 2 208 0 313 281 191 34 chr2 107390038 107390216 -143297638 + MIR SINE MIR 30 235 -27 21 71 0 0 chr2 107390301 107390343 -143297511 + AT_rich Low_complexity Low_complexity 1 42 0 818 235 33 5 chr2 107391311 107391524 -143296330 + MER20 DNA MER1_type 1 219 0 199 333 125 10 chr2 107391911 107392007 -143295847 - L2 LINE L2 -56 3216 3110 377 270 72 18 chr2 107393743 107393854 -143294000 + L2 LINE L2 3156 3272 0 2369 68 0 10 chr2 107394036 107394346 -143293508 - AluY SINE Alu -4 307 1 28 48 0 0 chr2 107394720 107394762 -143293092 + AT_rich Low_complexity Low_complexity 1 42 0 612 261 161 31 chr2 107395203 107395872 -143291982 - L2 LINE L2 -99 3214 2448 204 128 64 0 chr2 107395873 107395920 -143291934 + (TA)n Simple_repeat Simple_repeat 1 50 0 1712 171 15 60 chr2 107395940 107396337 -143291517 - MLT1B LTR MaLR -11 379 1 244 194 97 0 chr2 107396512 107396584 -143291270 + GA-rich Low_complexity Low_complexity 2 80 0 218 264 0 11 chr2 107397133 107397224 -143290630 + (TG)n Simple_repeat Simple_repeat 1 90 0 1853 142 40 53 chr2 107398933 107399313 -143288541 + THE1C LTR MaLR 1 375 0 209 250 164 60 chr2 107399673 107399789 -143288065 + MIR3 SINE MIR 15 142 -66 267 304 80 27 chr2 107400066 107400178 -143287676 - L2 LINE L2 0 3272 3155 14673 118 42 3 chr2 107400360 107402685 -143285169 - Tigger1 DNA MER2_type 0 2418 4 273 356 80 21 chr2 107402807 107402995 -143284859 + MIR SINE MIR 15 213 -49 575 249 74 23 chr2 107404788 107405045 -143282809 + L1MEd LINE L1 1044 1313 -4892 315 333 91 0 chr2 107405116 107405314 -143282540 + HAL1 LINE L1 1428 1643 -864 1608 167 30 0 chr2 107405345 107405458 -143282396 + AluJo SINE Alu 6 114 -198 387 0 0 0 chr2 107405458 107405501 -143282353 + (CA)n Simple_repeat Simple_repeat 2 44 0 1608 167 30 0 chr2 107405501 107405656 -143282198 + AluJo SINE Alu 114 282 -30 22 35 0 0 chr2 107405666 107405695 -143282159 + AT_rich Low_complexity Low_complexity 1 29 0 1171 287 145 32 chr2 107406082 107406426 -143281428 + L1MEd LINE L1 2074 2378 -3837 30 69 0 0 chr2 107406426 107406484 -143281370 + AT_rich Low_complexity Low_complexity 1 58 0 1171 287 145 32 chr2 107406484 107407095 -143280759 + L1MEd LINE L1 2378 3155 -3060 552 299 66 57 chr2 107407114 107407603 -143280251 - L1MEd LINE L1 -4908 1211 713 276 30 0 0 chr2 107407603 107407636 -143280218 + (TG)n Simple_repeat Simple_repeat 2 34 0 552 299 66 57 chr2 107407636 107407831 -143280023 - L1MEd LINE L1 -5406 713 521 300 210 48 0 chr2 107408231 107408293 -143279561 + L2 LINE L2 2288 2352 -962 297 0 0 0 chr2 107408307 107408340 -143279514 + (CA)n Simple_repeat Simple_repeat 1 33 0 * 351 0 0 0 chr2 107408339 107408378 -143279476 + (TC)n Simple_repeat Simple_repeat 1 39 0 1974 112 0 56 chr2 107408767 107409090 -143278764 - AluSg SINE Alu 0 310 1 262 346 70 23 chr2 107409234 107409491 -143278363 + L2 LINE L2 2938 3206 -107 562 73 61 0 chr2 107412388 107412470 -143275384 + L1PA11 LINE L1 6086 6172 -2 556 303 89 8 chr2 107412703 107412769 -143275085 - L1ME3A LINE L1 -200 5970 5911 225 0 0 0 chr2 107412769 107412794 -143275060 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2022 115 28 3 chr2 107412797 107413083 -143274771 - AluSg SINE Alu -17 293 1 556 303 89 8 chr2 107413083 107413372 -143274482 - L1ME3A LINE L1 -260 5910 5582 1728 175 41 25 chr2 107413382 107413748 -143274106 + THE1C LTR MaLR 1 372 -3 8985 118 68 8 chr2 107413753 107415242 -143272612 + THE1C-int LTR MaLR 3 1580 0 1837 152 52 33 chr2 107415242 107415610 -143272244 + THE1C LTR MaLR 1 375 0 365 324 93 45 chr2 107415630 107415942 -143271912 - L1 LINE L1 -2355 3791 3465 1613 173 19 27 chr2 107415997 107416368 -143271486 - L1MB7 LINE L1 -2 6182 5815 2137 189 50 78 chr2 107416386 107416612 -143271242 - L1MB7 LINE L1 -454 5726 5495 203 86 0 29 chr2 107416612 107416647 -143271207 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2137 189 50 78 chr2 107416647 107416967 -143270887 - L1MB7 LINE L1 -685 5495 5168 2100 155 0 0 chr2 107416967 107417277 -143270577 - AluSx SINE Alu -2 310 1 2137 189 50 78 chr2 107417277 107417816 -143270038 - L1MB7 LINE L1 -1012 5168 4664 1699 172 0 72 chr2 107417829 107418149 -143269705 - AluJo SINE Alu -13 299 3 231 276 164 35 chr2 107418284 107418400 -143269454 + MIR SINE MIR 39 169 -93 910 186 70 0 chr2 107418629 107418785 -143269069 - FAM SINE Alu -8 41 1 30 27 0 0 chr2 107420024 107420061 -143267793 + AT_rich Low_complexity Low_complexity 1 37 0 237 261 0 11 chr2 107420389 107420412 -143267442 - L1MA4A LINE L1 -24 6279 6257 542 221 0 95 chr2 107420412 107420530 -143267324 - L1PB4 LINE L1 -29 6127 5999 2381 147 52 17 chr2 107420530 107420938 -143266916 + MSTA LTR MaLR 3 424 -4 8508 168 39 14 chr2 107420942 107422554 -143265300 + MSTA-int LTR MaLR 1 1651 0 2146 140 80 18 chr2 107422556 107422957 -143264897 + MSTA LTR MaLR 3 428 0 542 221 0 95 chr2 107422957 107422988 -143264866 - L1PB4 LINE L1 -161 5995 5985 330 303 113 14 chr2 107423008 107423150 -143264704 - L1MD2 LINE L1 -515 5844 5689 411 263 145 27 chr2 107423281 107423586 -143264268 - L1MD2 LINE L1 -697 5465 5118 228 289 76 51 chr2 107423604 107423919 -143263935 - L1MD2 LINE L1 -1077 5069 4747 266 253 13 0 chr2 107423980 107424059 -143263795 + L1ME3A LINE L1 5903 5982 -188 6221 97 9 4 chr2 107424061 107425567 -143262287 - L1PA10 LINE L1 -2 6166 4649 522 0 55 33 chr2 107425567 107425658 -143262196 + (TTTTA)n Simple_repeat Simple_repeat 4 96 0 359 62 0 0 chr2 107425659 107425707 -143262147 - Alu SINE Alu -17 284 237 2330 116 8 25 chr2 107425707 107425729 -143262125 - L1PA10 LINE L1 -1489 4657 4636 2416 90 0 3 chr2 107425729 107426041 -143261813 - AluY SINE Alu 0 311 1 2330 116 8 25 chr2 107426041 107426416 -143261438 - L1PA10 LINE L1 -1510 4636 4267 1036 92 0 0 chr2 107426416 107426568 -143261286 + L1P LINE L1 3876 4027 -2119 * 12355 136 14 5 chr2 107426567 107428717 -143259137 - L1PA10 LINE L1 -1881 4265 2097 2303 120 0 0 chr2 107428930 107429239 -143258615 + AluSg SINE Alu 1 309 -1 289 195 52 13 chr2 107429239 107429316 -143258538 + L1MC4a LINE L1 7273 7352 -456 412 330 95 39 chr2 107429320 107429605 -143258249 + L2 LINE L2 2632 2932 -382 225 291 192 13 chr2 107429950 107430101 -143257753 - MLT1L LTR MaLR -224 391 214 453 259 55 40 chr2 107430304 107430505 -143257349 - MER3 DNA MER1_type -1 208 5 1642 37 5 28 chr2 107431203 107431419 -143256435 - L1PA4 LINE L1 0 6155 5945 2522 199 45 27 chr2 107431535 107432172 -143255682 - L1MD2 LINE L1 -274 6479 5831 488 126 20 13 chr2 107432172 107432270 -143255584 + MLT1A1 LTR MaLR 1 90 -338 637 248 24 65 chr2 107432444 107432690 -143255164 + MLT1A1 LTR MaLR 130 365 0 3064 250 96 15 chr2 107432690 107433960 -143253894 - L1MD2 LINE L1 -769 5771 4472 1522 262 36 22 chr2 107433954 107434640 -143253214 - L1MD2 LINE L1 -2470 4070 3375 * 1319 216 80 65 chr2 107434653 107435340 -143252514 - L1MD2 LINE L1 -3439 3101 2384 389 175 92 8 chr2 107435349 107435469 -143252385 - L1MD2 LINE L1 -4219 2321 2192 4810 221 58 32 chr2 107436021 107436154 -143251700 - L1MD2 LINE L1 -4358 2182 2054 2267 90 23 0 chr2 107436154 107436453 -143251401 - AluY SINE Alu -5 306 1 4810 221 58 32 chr2 107436453 107436880 -143250974 - L1MD2 LINE L1 -4486 2054 1640 2228 140 22 6 chr2 107436880 107437237 -143250617 - THE1B LTR MaLR 0 364 2 4810 221 58 32 chr2 107437237 107438161 -143249693 - L1MD2 LINE L1 -4900 1640 657 227 271 60 40 chr2 107438485 107438636 -143249218 + L2 LINE L2 3104 3257 -56 1220 267 78 27 chr2 107438702 107439231 -143248623 - L2 LINE L2 -1 3312 2754 776 220 92 32 chr2 107439231 107439481 -143248373 - LTR40b LTR ERVL 0 462 198 1448 277 80 26 chr2 107439703 107440026 -143247828 - L2 LINE L2 -572 2742 2381 1811 122 91 55 chr2 107440026 107440263 -143247591 - THE1C LTR MaLR 0 375 119 2094 124 3 40 chr2 107440263 107440586 -143247268 + AluSx SINE Alu 2 312 0 1811 122 91 55 chr2 107440586 107440710 -143247144 - THE1C LTR MaLR -256 119 1 1448 277 80 26 chr2 107440710 107440888 -143246966 - L2 LINE L2 -933 2381 2214 592 198 5 125 chr2 107440889 107441057 -143246797 - LTR16A1 LTR ERVL 0 457 313 2204 105 0 0 chr2 107441057 107441342 -143246512 + AluSq SINE Alu 1 285 -28 592 198 5 125 chr2 107441342 107441365 -143246489 - LTR16A1 LTR ERVL -144 313 289 420 200 75 8 chr2 107441373 107441493 -143246361 - LTR16A1 LTR ERVL -135 322 195 312 325 20 26 chr2 107441549 107441700 -143246154 - L2 LINE L2 -1093 2221 2072 1052 279 20 62 chr2 107441726 107442224 -143245630 - HsTC2c DNA Tc2 -64 665 189 228 67 0 0 chr2 107442535 107442565 -143245289 + (TTAAA)n Simple_repeat Simple_repeat 3 32 0 5000 173 18 14 chr2 107442692 107443857 -143243997 - L1MA7 LINE L1 0 6291 5124 492 266 136 43 chr2 107443867 107444426 -143243428 + HAL1 LINE L1 926 1536 -971 465 241 52 104 chr2 107445392 107445641 -143242213 + MIR SINE MIR 25 260 -2 639 260 48 37 chr2 107446556 107446825 -143241029 - MER87 LTR ERV1 -101 440 169 1635 219 109 78 chr2 107448764 107449823 -143238031 - L1MC5 LINE L1 -272 7689 6608 213 94 0 0 chr2 107449823 107449855 -143237999 + (CA)n Simple_repeat Simple_repeat 1 32 0 1635 219 109 78 chr2 107449855 107449907 -143237947 - L1MC5 LINE L1 -1353 6608 6559 3460 181 127 30 chr2 107450204 107451108 -143236746 + L1MC3 LINE L1 6764 7755 -30 28 48 0 0 chr2 107451136 107451178 -143236676 + AT_rich Low_complexity Low_complexity 1 42 0 183 42 0 0 chr2 107451673 107451697 -143236157 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 334 295 39 26 chr2 107451953 107452109 -143235745 - LTR33 LTR ERVL -339 182 25 416 271 133 9 chr2 107452245 107452455 -143235399 + L1MC4 LINE L1 6766 7001 -1041 46 45 0 0 chr2 107452482 107452549 -143235305 + AT_rich Low_complexity Low_complexity 1 67 0 684 226 124 75 chr2 107453166 107453609 -143234245 - MLT1C LTR MaLR -2 465 1 737 184 0 37 chr2 107453714 107453877 -143233977 + L1MB1 LINE L1 6011 6167 -1 1453 105 48 20 chr2 107454727 107454975 -143232879 + L1PB2 LINE L1 5897 6151 0 7659 126 49 3 chr2 107455276 107456520 -143231334 - HSMAR2 DNA Mariner -1 1301 1 2449 140 69 12 chr2 107457828 107458249 -143229605 - MER65A LTR ERV1 0 445 1 342 45 0 0 chr2 107461004 107461048 -143226806 + (TG)n Simple_repeat Simple_repeat 2 45 0 2280 201 71 97 chr2 107461753 107462499 -143225355 - LTR8A LTR ERV1 0 727 1 698 235 134 0 chr2 107462907 107463094 -143224760 - MER20 DNA MER1_type -7 212 1 196 301 199 6 chr2 107463120 107463296 -143224558 - L3 LINE CR1 -670 907 698 514 264 172 50 chr2 107463341 107463459 -143224395 - LTR33 LTR ERVL 0 521 419 2334 164 55 14 chr2 107463459 107463899 -143223955 + L1MB2 LINE L1 5712 6169 -2 514 264 172 50 chr2 107463899 107464204 -143223650 - LTR33 LTR ERVL -102 419 46 1764 165 65 30 chr2 107464892 107465262 -143222592 - MLT1B LTR MaLR -7 383 1 232 216 21 93 chr2 107465364 107465461 -143222393 + MIR SINE MIR 162 251 -11 325 227 0 0 chr2 107465586 107465661 -143222193 - L1MA8 LINE L1 0 6291 6217 * 803 156 32 15 chr2 107465644 107465815 -143222039 + L1 LINE L1 4538 4708 -1438 1599 197 25 19 chr2 107466340 107466660 -143221194 + MLT1A1 LTR MaLR 1 322 -43 1974 181 8 3 chr2 107466727 107467087 -143220767 + L1 LINE L1 4721 5082 -1064 1013 162 52 5 chr2 107467087 107467278 -143220576 - L1MC2 LINE L1 -14 6330 6131 2138 208 27 7 chr2 107467278 107467687 -143220167 - MLT2B2 LTR ERVL -8 507 91 9911 162 29 96 chr2 107467693 107470136 -143217718 - L1P LINE L1 -1072 5074 2797 2873 177 29 35 chr2 107470134 107470460 -143217394 - L1MC2 LINE L1 -748 5398 5072 * 261 0 0 0 chr2 107470460 107470489 -143217365 + (TG)n Simple_repeat Simple_repeat 2 30 0 2873 177 29 35 chr2 107470489 107470886 -143216968 - L1MC2 LINE L1 -1074 5072 4712 280 319 22 67 chr2 107472123 107472258 -143215596 + MER91B DNA MER1_type 2 130 -60 3109 126 2 2 chr2 107472277 107472723 -143215131 - Tigger2 DNA MER2_type 0 2718 2273 357 200 15 0 chr2 107472728 107472793 -143215061 - Tigger2 DNA MER2_type -2652 66 1 373 181 0 14 chr2 107472793 107472865 -143214989 + MER91B DNA MER1_type 90 160 -30 237 302 230 31 chr2 107472891 107473498 -143214356 - L2 LINE L2 -912 2402 1629 2056 229 58 22 chr2 107473498 107473995 -143213859 + LTR40a LTR ERVL 1 515 -4 237 302 230 31 chr2 107473995 107474105 -143213749 - L2 LINE L2 -1685 1629 1542 457 203 7 21 chr2 107474395 107474680 -143213174 + (TG)n Simple_repeat Simple_repeat 1 280 0 21 36 0 0 chr2 107474978 107475006 -143212848 + AT_rich Low_complexity Low_complexity 1 28 0 28 61 0 0 chr2 107475042 107475091 -143212763 + AT_rich Low_complexity Low_complexity 1 49 0 459 178 39 124 chr2 107475700 107475829 -143212025 - Charlie4a DNA MER1_type 0 508 391 526 289 85 29 chr2 107475928 107476303 -143211551 + LTR16A1 LTR ERVL 83 457 0 615 193 43 72 chr2 107476348 107476570 -143211284 - Charlie4a DNA MER1_type -1621 340 77 1850 204 142 20 chr2 107476570 107477020 -143210834 + MLT1D LTR MaLR 1 505 0 615 193 43 72 chr2 107477020 107477094 -143210760 - Charlie4a DNA MER1_type -1884 77 2 199 245 0 20 chr2 107477118 107477167 -143210687 + MIR3 SINE MIR 116 163 -45 909 261 102 30 chr2 107479681 107480045 -143207809 + MLT1B LTR MaLR 1 390 0 586 254 109 74 chr2 107480237 107480631 -143207223 - MLT1J LTR MaLR 0 511 104 2094 120 52 12 chr2 107480952 107481276 -143206578 + MER1B DNA MER1_type 1 337 -2 1047 85 0 0 chr2 107481298 107481464 -143206390 + AluSp/q SINE Alu 169 334 0 1889 153 0 0 chr2 107481473 107481760 -143206094 + AluSx SINE Alu 1 287 -25 229 128 0 0 chr2 107533566 107533605 -143154249 - MER114 LTR ERV -293 355 317 275 413 67 18 chr2 107534320 107534543 -143153311 + L2 LINE L2 2827 3060 -212 916 118 8 0 chr2 107534856 107534983 -143152871 - AluY SINE Alu -183 128 1 287 148 136 25 chr2 107535993 107536074 -143151780 - MIR SINE MIR -73 189 100 21 0 0 0 chr2 107536541 107536562 -143151292 + AT_rich Low_complexity Low_complexity 1 21 0 305 194 15 0 chr2 107537550 107537617 -143150237 + L1MC4 LINE L1 7700 7767 -275 6451 109 14 26 chr2 107538801 107540009 -143147845 - L1P3 LINE L1 -4459 2002 806 229 340 133 0 chr2 107540523 107540673 -143147181 + MIR SINE MIR 74 243 -19 816 316 57 38 chr2 107541391 107541844 -143146010 + LTR33 LTR ERVL 10 471 -50 2180 97 7 0 chr2 107542130 107542419 -143145435 + AluSp SINE Alu 4 294 -19 366 61 0 0 chr2 107542427 107542476 -143145378 + (CA)n Simple_repeat Simple_repeat 2 50 0 277 286 14 0 chr2 107542668 107542738 -143145116 + MER63 DNA MER1_type 988 1058 -2 668 281 75 34 chr2 107542740 107543444 -143144410 - L1ME LINE L1 -516 5654 4733 1446 269 54 42 chr2 107543504 107544117 -143143737 - L1ME1 LINE L1 -7 6159 5540 357 306 16 46 chr2 107544219 107544523 -143143331 - L1ME1 LINE L1 -3206 2940 2646 25 0 0 0 chr2 107544804 107544829 -143143025 + AT_rich Low_complexity Low_complexity 1 25 0 377 315 51 19 chr2 107544847 107545104 -143142750 - L1ME LINE L1 -378 5743 5479 946 95 0 0 chr2 107545431 107545557 -143142297 + L1PA7 LINE L1 6014 6139 -15 23 0 0 0 chr2 107545619 107545642 -143142212 + AT_rich Low_complexity Low_complexity 1 23 0 769 281 157 17 chr2 107545666 107546074 -143141780 + L1ME3A LINE L1 5483 5948 -214 276 298 1 37 chr2 107546174 107546299 -143141555 + L1ME3A LINE L1 5968 6087 -75 458 357 63 12 chr2 107546435 107546687 -143141167 + L3 LINE CR1 1312 1576 -1 3811 112 3 17 chr2 107547195 107547791 -143140063 - L1P LINE L1 -2265 3881 3294 2202 75 4 0 chr2 107547793 107548104 -143139750 - AluY SINE Alu 0 312 1 418 379 65 41 chr2 107548819 107549500 -143138354 - L2 LINE L2 -4 3268 2580 335 281 94 42 chr2 107549633 107549825 -143138029 - L1ME4a LINE L1 -264 5857 5656 257 256 44 0 chr2 107549904 107549994 -143137860 - L1ME4a LINE L1 -489 5632 5539 234 91 0 0 chr2 107550308 107550341 -143137513 + (TC)n Simple_repeat Simple_repeat 1 33 0 1970 190 123 2 chr2 107550830 107551278 -143136576 - MLT1D LTR MaLR -3 502 1 216 0 0 0 chr2 107552115 107552139 -143135715 + (TC)n Simple_repeat Simple_repeat 1 24 0 333 303 0 0 chr2 107552442 107552531 -143135323 - L1MC4 LINE L1 -1339 6703 6615 297 197 0 0 chr2 107552532 107552593 -143135261 + (TA)n Simple_repeat Simple_repeat 2 62 0 4420 212 63 20 chr2 107553760 107553869 -143133985 - L1MB5 LINE L1 -16 6158 6055 1748 141 42 65 chr2 107553869 107554253 -143133601 + THE1C LTR MaLR 1 375 0 4420 212 63 20 chr2 107554253 107555847 -143132007 - L1MB5 LINE L1 -119 6055 4379 26 0 0 0 chr2 107556048 107556074 -143131780 + AT_rich Low_complexity Low_complexity 1 26 0 2059 132 7 0 chr2 107556698 107556994 -143130860 - AluSx SINE Alu -14 298 1 2607 158 32 26 chr2 107557128 107557595 -143130259 + MER44D DNA MER2_type 1 525 -80 189 171 0 0 chr2 107557617 107557652 -143130202 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 613 143 0 0 chr2 107557673 107557757 -143130097 + MER44D DNA MER2_type 522 605 0 673 254 40 35 chr2 107558542 107558743 -143129111 + MLT1I LTR MaLR 8 209 -200 235 242 0 71 chr2 107559319 107559418 -143128436 + L1MC4 LINE L1 6614 6705 -1337 22 0 0 0 chr2 107559822 107559844 -143128010 + AT_rich Low_complexity Low_complexity 1 22 0 314 328 124 49 chr2 107560525 107560591 -143127263 + L2 LINE L2 2688 2748 -566 2389 154 8 20 chr2 107560591 107560604 -143127250 + MLT1B LTR MaLR 1 13 -377 1770 186 0 16 chr2 107560604 107560910 -143126944 - AluJo SINE Alu -11 301 1 2389 154 8 20 chr2 107560910 107561291 -143126563 + MLT1B LTR MaLR 13 390 0 314 328 124 49 chr2 107561291 107561489 -143126365 + L2 LINE L2 2748 2972 -342 325 287 113 0 chr2 107561937 107562052 -143125802 - LTR67 LTR ERVL -3 554 427 1021 331 102 30 chr2 107562771 107564178 -143123676 - ERVL LTR ERVL -454 5310 3766 246 239 0 28 chr2 107564417 107564488 -143123366 - MLT1L LTR MaLR 0 615 547 257 309 37 12 chr2 107564762 107564843 -143123011 - ERVL LTR ERVL -2364 3400 3318 293 291 128 75 chr2 107564969 107565344 -143122510 - ERVL LTR ERVL -2537 3117 2723 571 214 21 21 chr2 107565626 107565771 -143122083 - L1MB8 LINE L1 0 6178 6034 312 305 115 10 chr2 107565816 107566016 -143121838 - L1MB8 LINE L1 -273 5848 5628 249 223 138 21 chr2 107567223 107567317 -143120537 + L1MC4a LINE L1 6511 6615 -1193 201 234 0 0 chr2 107567334 107567381 -143120473 + (CTTTA)n Simple_repeat Simple_repeat 3 49 0 1565 118 0 9 chr2 107567381 107567609 -143120245 + L1PA13 LINE L1 5938 6163 0 5959 148 20 51 chr2 107567625 107568811 -143119043 + L1MC1 LINE L1 5186 6333 0 1972 232 48 85 chr2 107568813 107569004 -143118850 + L1MD3 LINE L1 6618 6814 -1181 1163 216 121 39 chr2 107569004 107569342 -143118512 + MLT1A2 LTR MaLR 5 370 -4 1972 232 48 85 chr2 107569342 107569835 -143118019 + L1MD3 LINE L1 6814 7277 -718 514 128 13 0 chr2 107569944 107570022 -143117832 - MADE1 DNA Mariner -1 79 1 24 0 0 0 chr2 107570683 107570707 -143117147 + AT_rich Low_complexity Low_complexity 1 24 0 235 226 71 36 chr2 107571138 107571222 -143116632 - MIR SINE MIR -174 88 2 2072 116 3 14 chr2 107571326 107571618 -143116236 + AluSq SINE Alu 2 290 -23 351 276 0 0 chr2 107571763 107571850 -143116004 - L1MC4 LINE L1 -1339 6703 6617 331 299 0 0 chr2 107571785 107571872 -143115982 + L1MC4 LINE L1 6614 6700 -1342 * 2078 98 62 0 chr2 107571872 107572147 -143115707 - AluSc SINE Alu -17 292 1 830 172 22 3 chr2 107572891 107573083 -143114771 + LTR54B LTR ERV1 5 251 -247 1745 158 3 7 chr2 107573083 107573368 -143114486 - AluJo SINE Alu -10 302 19 1431 148 13 4 chr2 107573369 107573599 -143114255 - LTR29 LTR ERV1 -4 618 387 1402 158 83 51 chr2 107573566 107573791 -143114063 - LTR49 LTR ERV1 -248 347 106 * 2241 156 24 16 chr2 107573791 107574163 -143113691 + THE1C LTR MaLR 1 375 0 1402 158 83 51 chr2 107574163 107574273 -143113581 - LTR49 LTR ERV1 -489 106 1 1411 137 18 4 chr2 107574304 107574530 -143113324 + LTR54 LTR ERV1 282 510 0 4600 134 74 21 chr2 107574672 107574696 -143113158 + MER4D LTR ERV1 1 22 -443 2167 124 0 3 chr2 107574696 107574995 -143112859 + AluSq SINE Alu 1 298 -15 4600 134 74 21 chr2 107574995 107575830 -143112024 + MER4D LTR ERV1 22 465 0 304 121 35 0 chr2 107575830 107575885 -143111969 + MER41A LTR ERV1 139 195 -359 1809 171 4 0 chr2 107575940 107576221 -143111633 - AluSx SINE Alu -30 282 1 346 179 9 46 chr2 107576222 107576331 -143111523 + MER41B LTR ERV1 395 466 -12 22 0 0 0 chr2 107577140 107577162 -143110692 + AT_rich Low_complexity Low_complexity 1 22 0 2426 81 0 10 chr2 107577668 107577978 -143109876 - AluY SINE Alu -4 307 1 285 326 12 0 chr2 107578994 107579080 -143108774 - MIR SINE MIR -21 241 155 1870 161 133 11 chr2 107579118 107579471 -143108383 - MSTD LTR MaLR 0 396 1 276 265 255 0 chr2 107579639 107579737 -143108117 - MER5A DNA MER1_type -1 188 66 475 267 160 0 chr2 107579913 107580063 -143107791 - MER96 DNA MER1_type -1 174 1 274 235 25 49 chr2 107580655 107580736 -143107118 - MIR SINE MIR -174 88 10 1895 199 0 5 chr2 107581678 107582049 -143105805 + L1 LINE L1 3686 4054 -2092 1846 182 105 3 chr2 107583174 107583525 -143104329 + MLT1B LTR MaLR 1 387 -3 244 174 14 14 chr2 107584941 107585010 -143102844 + (TA)n Simple_repeat Simple_repeat 2 70 0 216 377 192 0 chr2 107585294 107585440 -143102414 - MER5A DNA MER1_type -7 182 9 306 0 0 0 chr2 107585706 107585740 -143102114 + (CA)n Simple_repeat Simple_repeat 2 35 0 1996 102 158 75 chr2 107586276 107586649 -143101205 - MER4A LTR ERV1 0 664 261 603 124 21 10 chr2 107586649 107586746 -143101108 - MER4A LTR ERV1 -566 98 1 1048 169 8 87 chr2 107586746 107586862 -143100992 + Charlie5 DNA MER1_type 2341 2426 -159 793 249 85 87 chr2 107586862 107587055 -143100799 - MER34 LTR ERV1 0 542 350 2384 85 3 0 chr2 107587055 107587349 -143100505 - AluSp SINE Alu -16 297 3 793 249 85 87 chr2 107587349 107587698 -143100156 - MER34 LTR ERV1 -192 350 1 1048 169 8 87 chr2 107587698 107587847 -143100007 + Charlie5 DNA MER1_type 2426 2585 0 195 42 0 0 chr2 107588506 107588530 -143099324 + (TC)n Simple_repeat Simple_repeat 2 25 0 1816 175 14 0 chr2 107588548 107588845 -143099009 + AluJo SINE Alu 1 301 -11 2048 124 7 16 chr2 107588956 107589263 -143098591 + AluSq SINE Alu 1 304 -9 749 254 83 93 chr2 107589280 107589555 -143098299 + MER34 LTR ERV1 1 277 -265 390 147 67 13 chr2 107589555 107589630 -143098224 - MADE1 DNA Mariner -1 79 1 749 254 83 93 chr2 107589630 107589819 -143098035 + MER34 LTR ERV1 277 462 -80 2202 129 0 0 chr2 107589819 107590130 -143097724 - AluSx SINE Alu -1 311 1 749 254 83 93 chr2 107590130 107590159 -143097695 + MER34 LTR ERV1 462 490 -52 827 150 15 13 chr2 107590174 107590336 -143097518 - L1ME2 LINE L1 -177 5987 5826 2140 174 16 5 chr2 107590637 107591016 -143096838 - L1MB3 LINE L1 -1 6182 5800 2568 146 37 0 chr2 107591016 107591481 -143096373 - L1M4c LINE L1 -4017 2367 1886 804 174 40 7 chr2 107591489 107591638 -143096216 + MLT1B LTR MaLR 187 340 -50 2070 167 16 5 chr2 107591639 107592011 -143095843 - L1M4c LINE L1 -4473 1911 1536 1171 149 24 104 chr2 107592057 107592345 -143095509 - L1MA4 LINE L1 -6 6294 6030 * 7536 163 43 43 chr2 107592343 107593869 -143093985 - L1M4c LINE L1 -4858 1526 1 1070 233 119 60 chr2 107595283 107595746 -143092108 - L2 LINE L2 -644 2670 2181 189 306 41 71 chr2 107595929 107596027 -143091827 + L2 LINE L2 3178 3272 0 192 339 82 38 chr2 107596969 107597152 -143090702 - MIR SINE MIR -11 251 61 198 330 110 37 chr2 107597664 107597773 -143090081 + L2 LINE L2 3129 3245 -27 1495 184 0 4 chr2 107598493 107598738 -143089116 - MLT1A1 LTR MaLR 0 365 122 471 268 32 16 chr2 107598955 107599078 -143088776 - MER5A DNA MER1_type -1 188 64 464 240 0 0 chr2 107599240 107599336 -143088518 + L1MEd LINE L1 1 96 -6023 986 240 60 109 chr2 107600097 107600663 -143087191 + MER34 LTR ERV1 1 538 -4 400 234 71 78 chr2 107600995 107601149 -143086705 - MLT1J1 LTR MaLR 0 446 294 * 655 274 0 30 chr2 107601146 107601310 -143086544 - MLT1J2 LTR MaLR -246 204 46 410 200 33 22 chr2 107601405 107601495 -143086359 - MLT1J2 LTR MaLR -307 143 53 198 0 0 0 chr2 107602532 107602554 -143085300 + (T)n Simple_repeat Simple_repeat 1 22 0 662 249 68 27 chr2 107602719 107602940 -143084914 - MLT1J1 LTR MaLR -153 293 64 235 294 47 12 chr2 107602872 107602957 -143084897 - LTR67 LTR ERVL -381 176 89 * 1169 307 119 28 chr2 107604391 107605249 -143082605 - ERVL LTR ERVL -921 4567 3789 1266 14 9 27 chr2 107605249 107605472 -143082382 + (TTC)n Simple_repeat Simple_repeat 1 219 0 1169 307 119 28 chr2 107605472 107605677 -143082177 - ERVL LTR ERVL -1699 3789 3604 2295 149 6 23 chr2 107605677 107606020 -143081834 + MER1B DNA MER1_type 1 337 0 1169 307 119 28 chr2 107606020 107606361 -143081493 - ERVL LTR ERVL -1884 3604 2997 1152 153 108 22 chr2 107606455 107606678 -143081176 - MSTA LTR MaLR 0 428 187 350 39 0 59 chr2 107606672 107606723 -143081131 - MSTA LTR MaLR -380 48 1 * 386 323 72 65 chr2 107606913 107607220 -143080634 - ERVL LTR ERVL -5042 722 414 301 275 203 22 chr2 107608404 107608586 -143079268 + MLT1H1 LTR MaLR 335 549 -6 229 135 39 0 chr2 107608805 107608857 -143078997 + A-rich Low_complexity Low_complexity 2 55 0 597 266 64 10 chr2 107609092 107609295 -143078559 - MIR SINE MIR 0 262 49 2284 88 7 0 chr2 107609690 107609995 -143077859 - AluSx SINE Alu -5 307 1 344 247 42 72 chr2 107610040 107610206 -143077648 - L1ME4a LINE L1 -157 5964 5804 387 291 155 19 chr2 107610405 107610611 -143077243 + MIR SINE MIR 26 259 -3 492 252 178 39 chr2 107610765 107610995 -143076859 + MIR SINE MIR 1 262 0 328 299 81 14 chr2 107611066 107611277 -143076577 + MLT1J2 LTR MaLR 131 355 -95 658 240 46 86 chr2 107611580 107611711 -143076143 + HsTC2 DNA Tc2 1292 1427 -471 2290 113 3 0 chr2 107611711 107612022 -143075832 + AluSq SINE Alu 1 312 -1 658 240 46 86 chr2 107612022 107612194 -143075660 + HsTC2 DNA Tc2 1427 1759 -139 1201 207 59 20 chr2 107612217 107612522 -143075332 - MER33 DNA MER1_type -6 318 2 245 298 64 0 chr2 107612544 107612638 -143075216 + HsTC2 DNA Tc2 1799 1898 0 333 266 147 28 chr2 107613480 107613623 -143074231 + MIR SINE MIR 31 190 -72 994 167 92 0 chr2 107613679 107613853 -143074001 - MER58A DNA MER1_type 0 224 35 21 0 0 0 chr2 107615708 107615729 -143072125 + AT_rich Low_complexity Low_complexity 1 21 0 387 0 0 0 chr2 107617079 107617122 -143070732 + (CAA)n Simple_repeat Simple_repeat 2 44 0 2393 82 0 13 chr2 107618020 107618335 -143069519 + AluY SINE Alu 1 311 0 2276 83 17 3 chr2 107621089 107621390 -143066464 - AluY SINE Alu -6 305 1 1412 143 0 18 chr2 107622279 107622502 -143065352 + AluSg/x SINE Alu 90 308 -4 349 316 103 0 chr2 107622722 107622839 -143065015 + MER91B DNA MER1_type 62 190 0 241 247 11 129 chr2 107623012 107623190 -143064664 + MER5A DNA MER1_type 1 157 -32 356 244 33 3 chr2 107623206 107623407 -143064447 - MER5C DNA MER1_type -50 274 9 1734 145 10 23 chr2 107624140 107624444 -143063410 + AluJb SINE Alu 7 306 -6 953 212 69 9 chr2 107625234 107625465 -143062389 - MER68 LTR ERV1 0 562 318 1359 187 67 38 chr2 107625465 107625808 -143062046 + MLT1A1 LTR MaLR 1 353 -12 1736 190 19 9 chr2 107625820 107626136 -143061718 - MER68 LTR ERV1 -240 322 4 695 71 0 0 chr2 107626581 107626666 -143061188 - AluY SINE Alu -14 297 213 309 282 20 50 chr2 107628665 107628814 -143059040 + L1ME LINE L1 5556 5686 -435 631 267 41 0 chr2 107629136 107629282 -143058572 - MIR SINE MIR -102 160 9 23989 144 23 18 chr2 107630115 107636231 -143051623 + L1M1 LINE L1 11 6162 -1403 288 56 0 0 chr2 107636231 107636267 -143051587 + MADE1 DNA Mariner 2 37 -43 405 0 0 0 chr2 107636908 107636953 -143050901 + (CA)n Simple_repeat Simple_repeat 2 46 0 291 71 0 0 chr2 107636953 107636995 -143050859 + (GA)n Simple_repeat Simple_repeat 1 42 0 2049 189 8 24 chr2 107637125 107637496 -143050358 - MLT1A1 LTR MaLR 0 365 1 1956 145 0 0 chr2 107637816 107638119 -143049735 + AluY SINE Alu 1 303 -8 733 239 61 17 chr2 107638406 107638539 -143049315 + MER5A DNA MER1_type 2 146 -43 1520 219 175 34 chr2 107638539 107639014 -143048840 + MLT1F LTR MaLR 1 542 0 733 239 61 17 chr2 107639014 107639060 -143048794 + MER5A DNA MER1_type 146 189 0 310 276 82 20 chr2 107639069 107639167 -143048687 - L2 LINE L2 0 3272 3169 293 299 172 0 chr2 107639177 107639334 -143048520 + L2 LINE L2 3113 3296 -17 1454 173 20 16 chr2 107639625 107639880 -143047974 - MSTA LTR MaLR 0 428 173 1197 76 0 0 chr2 107639880 107640024 -143047830 + AluSg/x SINE Alu 158 301 -11 754 165 165 0 chr2 107640029 107640187 -143047667 - MSTA LTR MaLR -244 184 1 611 292 31 0 chr2 107641104 107641299 -143046555 + MER3 DNA MER1_type 1 201 -8 419 240 19 0 chr2 107641312 107641416 -143046438 - MIR SINE MIR -108 154 49 1211 255 73 73 chr2 107642612 107643146 -143044708 + MLT1H1 LTR MaLR 2 535 -20 1305 162 34 26 chr2 107643214 107643448 -143044406 + MER46A DNA MER2_type 1 236 0 1044 229 28 0 chr2 107643953 107644171 -143043683 - MER58A DNA MER1_type 0 224 1 516 257 55 50 chr2 107644216 107644434 -143043420 + L1ME1 LINE L1 5945 6163 -3 187 304 116 0 chr2 107644917 107644986 -143042868 - L3 LINE CR1 -2 1575 1499 227 260 55 41 chr2 107645058 107645131 -143042723 - MER5B DNA MER1_type -98 80 7 261 247 44 82 chr2 107646661 107646843 -143041011 + MER104 DNA Tc2 6 180 0 792 236 113 15 chr2 107649050 107649253 -143038601 + MER58A DNA MER1_type 1 223 -1 3175 210 129 47 chr2 107649457 107650112 -143037742 - Charlie1a DNA MER1_type -1342 1419 648 2088 109 9 59 chr2 107650112 107650432 -143037422 + AluSp SINE Alu 1 304 -9 3175 210 129 47 chr2 107650432 107650799 -143037055 - Charlie1a DNA MER1_type -2113 648 313 548 221 44 25 chr2 107650797 107650955 -143036899 - Charlie1a DNA MER1_type -1252 203 43 * 444 198 239 18 chr2 107652051 107652218 -143035636 + MIR SINE MIR 9 212 -50 2231 121 0 6 chr2 107652220 107652534 -143035320 + AluSx SINE Alu 1 312 0 180 306 105 50 chr2 107652572 107652791 -143035063 + L2 LINE L2 2746 2976 -338 255 264 11 23 chr2 107654915 107655002 -143032852 + L2 LINE L2 3226 3311 -2 2051 193 10 20 chr2 107655344 107655744 -143032110 + MLT2C1 LTR ERVL 2 397 0 185 288 62 62 chr2 107658450 107658530 -143029324 - L2 LINE L2 -333 2939 2860 * 189 352 28 0 chr2 107658508 107658579 -143029275 + L2 LINE L2 3239 3311 -2 248 220 20 0 chr2 107659078 107659128 -143028726 - MARNA DNA Mariner -71 515 465 579 244 62 112 chr2 107659186 107659716 -143028138 + MLT1H1 LTR MaLR 1 528 -39 462 71 86 0 chr2 107659784 107659854 -143028000 - L1PA16 LINE L1 -5 6161 6086 263 313 36 9 chr2 107660000 107660112 -143027742 + MARNA DNA Mariner 414 528 -58 618 285 12 6 chr2 107660272 107660444 -143027410 - MIR SINE MIR -24 238 66 202 147 29 0 chr2 107660549 107660583 -143027271 - MER5C DNA MER1_type -5 319 285 619 183 17 0 chr2 107660645 107660760 -143027094 - MER5C DNA MER1_type -205 119 3 587 280 39 90 chr2 107660914 107661493 -143026361 - MER21B LTR ERV1 -132 799 179 889 121 0 14 chr2 107661496 107661636 -143026218 - AluSg/x SINE Alu -1 309 172 529 282 34 27 chr2 107661636 107661785 -143026069 - MER21B LTR ERV1 -674 189 40 3022 136 26 9 chr2 107662205 107662660 -143025194 + LTR24 LTR ERV1 5 467 0 4716 176 30 33 chr2 107662664 107663570 -143024284 + MER4D LTR ERV1 1 903 0 192 77 0 0 chr2 107665125 107665151 -143022703 + (T)n Simple_repeat Simple_repeat 1 26 0 314 339 54 0 chr2 107665955 107666067 -143021787 + L2 LINE L2 3155 3272 0 247 289 176 7 chr2 107667735 107667877 -143019977 + MIR SINE MIR 81 246 -16 245 229 25 42 chr2 107667945 107668063 -143019791 + (TTATA)n Simple_repeat Simple_repeat 4 119 0 798 164 62 31 chr2 107668203 107668398 -143019456 + Ricksha DNA DNA 2564 2764 -90 24 67 0 0 chr2 107669154 107669199 -143018655 + AT_rich Low_complexity Low_complexity 1 45 0 371 278 113 0 chr2 107669467 107669582 -143018272 + MIR SINE MIR 57 184 -78 263 287 75 34 chr2 107670067 107670202 -143017652 - MIR SINE MIR -63 145 42 2107 120 0 3 chr2 107670785 107671099 -143016755 + AluSx SINE Alu 1 313 0 1589 294 111 15 chr2 107672778 107673761 -143014093 + L2 LINE L2 2216 3290 -23 262 290 60 20 chr2 107674857 107674957 -143012897 - L2 LINE L2 -23 3290 3187 2097 116 0 10 chr2 107675040 107675343 -143012511 - AluSx SINE Alu -2 310 11 309 302 99 47 chr2 107676492 107676664 -143011190 - MIR3 SINE MIR -20 188 8 333 301 0 52 chr2 107677051 107677187 -143010667 + MIR SINE MIR 56 184 -78 307 282 43 26 chr2 107677304 107677421 -143010433 + MER5A DNA MER1_type 7 125 -64 184 297 36 54 chr2 107677328 107677439 -143010415 - MER5A DNA MER1_type -22 167 59 * 287 322 92 23 chr2 107678020 107678194 -143009660 + MIR SINE MIR 71 256 -6 1335 199 9 60 chr2 107678311 107678627 -143009227 + MER63B DNA MER1_type 1 300 -136 235 283 152 0 chr2 107679126 107679218 -143008636 - MIR SINE MIR -58 150 45 431 293 51 59 chr2 107679461 107679630 -143008224 - MIR SINE MIR -6 256 88 4162 207 87 39 chr2 107679630 107680622 -143007232 + MER45B DNA AcHobo 2 1040 0 431 293 51 59 chr2 107680622 107680705 -143007149 - MIR SINE MIR -174 88 6 195 254 254 0 chr2 107682426 107682493 -143005361 - L2 LINE L2 -1 3271 3188 7174 117 29 53 chr2 107684366 107685627 -143002227 - Tigger3b DNA MER2_type -1 1230 1 189 0 0 0 chr2 107686015 107686036 -143001818 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1302 86 46 6 chr2 107686043 107686218 -143001636 - AluSq SINE Alu -26 287 106 1840 162 3 19 chr2 107688583 107688898 -142998956 - AluSx SINE Alu -2 310 1 830 185 6 43 chr2 107689388 107689550 -142998304 - FRAM SINE Alu -19 157 2 776 210 68 6 chr2 107689972 107690148 -142997706 + L1ME3A LINE L1 5943 6129 -41 1217 218 20 59 chr2 107691481 107691607 -142996247 - MER2 DNA MER2_type 0 345 216 1625 176 4 4 chr2 107691607 107691880 -142995974 + AluJo SINE Alu 6 278 -34 1217 218 20 59 chr2 107691880 107691900 -142995954 - MER2 DNA MER2_type -129 216 197 751 216 0 8 chr2 107691900 107692034 -142995820 + FLAM_C SINE Alu 1 133 0 1217 218 20 59 chr2 107692034 107692244 -142995610 - MER2 DNA MER2_type -148 197 2 209 192 48 55 chr2 107693097 107693243 -142994611 + (TTATA)n Simple_repeat Simple_repeat 5 149 0 * 370 173 62 23 chr2 107693157 107693500 -142994354 + (TA)n Simple_repeat Simple_repeat 1 356 0 222 200 0 0 chr2 107694322 107694362 -142993492 + (TG)n Simple_repeat Simple_repeat 2 41 0 1729 171 26 13 chr2 107694397 107694702 -142993152 - AluJo SINE Alu -3 309 1 402 253 238 30 chr2 107695725 107695927 -142991927 + MIR SINE MIR 19 262 0 248 383 46 5 chr2 107697639 107697835 -142990019 - L3b LINE CR1 -209 1374 1171 256 238 36 0 chr2 107698333 107698417 -142989437 - L1MC4 LINE L1 -1339 6703 6617 25 75 0 0 chr2 107700194 107700247 -142987607 + GC_rich Low_complexity Low_complexity 1 53 0 25 40 0 20 chr2 107701684 107701710 -142986144 + AT_rich Low_complexity Low_complexity 1 27 -22 2982 6 0 0 chr2 107701710 107702028 -142985826 + AluYb8 SINE Alu 1 318 0 25 40 0 20 chr2 107702028 107702051 -142985803 + AT_rich Low_complexity Low_complexity 27 49 0 219 223 96 134 chr2 107702202 107702255 -142985599 + MIR SINE MIR 110 163 -99 2365 73 3 0 chr2 107702255 107702556 -142985298 + AluSg SINE Alu 1 302 -8 219 223 96 134 chr2 107702556 107702659 -142985195 + MIR SINE MIR 163 260 -2 191 296 56 0 chr2 107704371 107704425 -142983429 + MIR SINE MIR 19 75 -133 222 196 0 0 chr2 107704739 107704785 -142983069 - MIR SINE MIR -44 218 173 2540 215 76 78 chr2 107704815 107705754 -142982100 - L1MC4 LINE L1 0 8042 7106 2376 96 0 16 chr2 107705758 107706071 -142981783 - AluSx SINE Alu 0 312 5 1606 152 7 15 chr2 107706196 107706466 -142981388 + MER89 LTR ERV1 292 559 0 2225 108 3 13 chr2 107707179 107707486 -142980368 - AluY SINE Alu -7 304 1 2201 180 70 8 chr2 107707775 107708176 -142979678 + MSTB LTR MaLR 1 426 0 1517 223 56 42 chr2 107708371 107708696 -142979158 + Charlie1b DNA MER1_type 9 343 -2418 3692 210 24 11 chr2 107708696 107709420 -142978434 + MER44D DNA MER2_type 1 605 0 1517 223 56 42 chr2 107709420 107709543 -142978311 + Charlie1b DNA MER1_type 343 463 -60 809 138 0 0 chr2 107709543 107709652 -142978202 + AluSq/x SINE Alu 2 110 -203 1984 143 3 13 chr2 107710765 107711073 -142976781 - AluSx SINE Alu -7 305 1 378 0 0 0 chr2 107711240 107711282 -142976572 + (CA)n Simple_repeat Simple_repeat 2 43 0 2362 171 18 16 chr2 107711527 107711965 -142975889 - Tigger2 DNA MER2_type 0 2718 2280 2071 89 59 7 chr2 107711974 107712277 -142975577 - L1PA10 LINE L1 -15 6153 5835 1039 61 0 0 chr2 107712277 107712409 -142975445 + L1PA10 LINE L1 5681 5812 -356 405 179 0 0 chr2 107712418 107712485 -142975369 - Tigger2 DNA MER2_type -2649 69 3 1188 275 96 10 chr2 107712528 107712924 -142974930 + MER119 DNA MER1_type 1 430 -153 2581 227 47 15 chr2 107712924 107713519 -142974335 + MER82 DNA MER2_type 1 614 -39 460 228 47 47 chr2 107713535 107713684 -142974170 + MER119 DNA MER1_type 432 580 -3 7746 16 0 0 chr2 107714233 107715723 -142972131 - L1PA2 LINE L1 -3 6152 4665 384 268 76 31 chr2 107715851 107716075 -142971779 + L1ME3A LINE L1 5262 5495 -669 665 242 22 22 chr2 107716112 107716294 -142971560 + L1ME3A LINE L1 5724 5905 -265 4853 245 92 15 chr2 107716308 107718379 -142969475 - L1MC/D LINE L1 -679 5957 3741 1356 273 74 10 chr2 107718375 107718862 -142968992 - L1MC/D LINE L1 -5202 1338 821 * 695 262 102 82 chr2 107719123 107719527 -142968327 - LTR16C LTR ERVL -3 488 77 1639 106 0 9 chr2 107719527 107719754 -142968100 + AluSg1 SINE Alu 1 225 -84 974 260 89 43 chr2 107721405 107721820 -142966034 - MLT1C LTR MaLR -28 439 6 1558 123 32 16 chr2 107722724 107722977 -142964877 + MSTB1 LTR MaLR 174 430 -2 626 133 0 20 chr2 107723126 107723224 -142964630 + L1P LINE L1 1 96 -6050 27092 70 5 3 chr2 107723224 107726816 -142961038 + L1P LINE L1 623 4222 -1924 21240 167 50 11 chr2 107726816 107728263 -142959591 + ERVL-D LTR ERVL 1482 2871 -2893 429 36 0 0 chr2 107728263 107728318 -142959536 + (CA)n Simple_repeat Simple_repeat 2 56 0 21240 167 50 11 chr2 107728318 107730556 -142957298 + ERVL-D LTR ERVL 2871 5311 -453 1377 173 0 0 chr2 107730556 107730770 -142957084 + AluJb SINE Alu 85 298 -14 1426 186 153 38 chr2 107730779 107730904 -142956950 + ERVL-D LTR ERVL 5291 5400 -364 264 30 0 0 chr2 107730904 107730937 -142956917 + (TG)n Simple_repeat Simple_repeat 2 34 0 1541 167 178 0 chr2 107730940 107731233 -142956621 - MER7A DNA MER2_type 0 346 4 1426 186 153 38 chr2 107731233 107731528 -142956326 + ERVL-D LTR ERVL 5401 5764 0 1075 252 32 36 chr2 107731534 107731881 -142955973 + MLT2D LTR ERVL 69 412 -2 225 280 67 0 chr2 107731921 107731996 -142955858 + MLT1L LTR MaLR 146 225 -390 * 242 235 0 0 chr2 107731990 107732041 -142955813 - MLT1L LTR MaLR -409 206 156 1127 253 9 9 chr2 107732042 107732370 -142955484 + L1M4 LINE L1 5016 5343 -803 582 282 127 34 chr2 107732391 107732682 -142955172 + MLT1L LTR MaLR 246 563 -52 180 0 0 0 chr2 107734011 107734031 -142953823 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1567 195 105 0 chr2 107734036 107734370 -142953484 - L1MC2 LINE L1 -12 6332 5964 1005 133 53 0 chr2 107734386 107734536 -142953318 + FRAM SINE Alu 1 158 -18 1700 152 26 3 chr2 107734542 107734844 -142953010 - L1MB2 LINE L1 -2 6169 5861 2560 191 14 2 chr2 107734860 107735347 -142952507 - MER34 LTR ERV1 -22 520 28 2897 189 45 10 chr2 107735359 107735721 -142952133 - L1MB2 LINE L1 -307 5864 5516 186 43 0 0 chr2 107735721 107735744 -142952110 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2897 189 45 10 chr2 107735744 107736201 -142951653 - L1MB2 LINE L1 -655 5516 5013 1217 234 86 33 chr2 107736203 107736562 -142951292 + MSTD LTR MaLR 1 378 -18 5338 232 20 5 chr2 107736575 107737883 -142949971 - L1MB2 LINE L1 -1131 5015 3689 4749 261 43 23 chr2 107737883 107739897 -142947957 - L1MCa LINE L1 -1415 5011 2924 4608 59 24 16 chr2 107739938 107740963 -142946891 - MER11A LTR ERVK 0 1266 1 3245 240 114 23 chr2 107740974 107743301 -142944553 - L1MCa LINE L1 -3549 2877 412 207 0 0 0 chr2 107743301 107743324 -142944530 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3245 240 114 23 chr2 107743324 107743391 -142944463 - L1MCa LINE L1 -6014 412 353 364 308 165 31 chr2 107744033 107744257 -142943597 + MIR SINE MIR 6 259 -3 2153 102 0 0 chr2 107744396 107744705 -142943149 + AluSx SINE Alu 9 317 0 372 226 123 19 chr2 107744765 107744871 -142942983 + MIR SINE MIR 104 220 -42 204 319 25 59 chr2 107744918 107745037 -142942817 + MIR SINE MIR 146 260 -2 215 192 39 26 chr2 107745689 107745767 -142942087 + A-rich Low_complexity Low_complexity 5 83 0 303 28 0 0 chr2 107746394 107746430 -142941424 + (TG)n Simple_repeat Simple_repeat 2 37 0 316 307 101 44 chr2 107747247 107747475 -142940379 + MIR SINE MIR 21 261 -1 343 219 0 0 chr2 107747530 107747603 -142940251 + Charlie4 DNA MER1_type 72 144 -1817 921 218 37 0 chr2 107747720 107747936 -142939918 + MER58A DNA MER1_type 1 224 0 326 313 23 23 chr2 107748033 107748161 -142939693 - L2 LINE L2 -22 3291 3164 1422 253 16 29 chr2 107748880 107749344 -142938510 - MER89 LTR ERV1 0 559 3 2061 178 34 32 chr2 107749672 107750220 -142937634 - MLT2A2 LTR ERVL -2 552 1 320 272 0 0 chr2 107750964 107751045 -142936809 - L1MEc LINE L1 -2931 3284 3204 356 260 0 0 chr2 107751052 107751156 -142936698 - L1MEc LINE L1 -4050 2346 2243 34 42 0 0 chr2 107751794 107751842 -142936012 + AT_rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr2 107753055 107753077 -142934777 + AT_rich Low_complexity Low_complexity 1 22 0 207 75 25 50 chr2 107753604 107753644 -142934210 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 655 310 81 48 chr2 107755194 107755552 -142932302 - MLT1I LTR MaLR 0 409 40 22 56 0 0 chr2 107755560 107755596 -142932258 + AT_rich Low_complexity Low_complexity 1 36 0 718 189 23 0 chr2 107755596 107755728 -142932126 - AluJb SINE Alu -177 135 1 661 241 0 15 chr2 107756025 107756220 -142931634 + L1MEc LINE L1 2155 2346 -4050 285 183 0 0 chr2 107756772 107756832 -142931022 + (TAG)n Simple_repeat Simple_repeat 1 60 0 572 324 122 9 chr2 107756943 107757279 -142930575 + HsTC2 DNA Tc2 493 866 -1032 14725 31 15 0 chr2 107758733 107761248 -142926606 + L1PA4 LINE L1 3621 6147 -8 1298 244 13 45 chr2 107761514 107761891 -142925963 - MLT1A1 LTR MaLR 0 365 1 3780 133 20 65 chr2 107763026 107763661 -142924193 - L1MA4A LINE L1 -413 6592 6005 2607 132 6 3 chr2 107763661 107764024 -142923830 - THE1B LTR MaLR 0 364 1 3780 133 20 65 chr2 107764024 107764553 -142923301 - L1MA4A LINE L1 -1000 6005 5454 349 221 0 0 chr2 107764553 107764621 -142923233 - L1MA4A LINE L1 -2462 4386 4319 297 210 60 10 chr2 107764643 107764743 -142923111 + L1MEc LINE L1 2963 3067 -3148 1792 203 18 9 chr2 107764753 107765187 -142922667 - L1MA4A LINE L1 -2542 4306 3869 296 213 67 13 chr2 107765181 107765256 -142922598 + L1M4c LINE L1 2401 2479 -3905 * 1363 96 101 0 chr2 107765260 107765448 -142922406 - AluY SINE Alu -52 259 53 1268 74 0 0 chr2 107765448 107765611 -142922243 - L1PA8A LINE L1 -390 5741 5579 576 70 0 0 chr2 107765611 107765682 -142922172 - AluY SINE Alu -238 72 2 180 0 0 0 chr2 107765691 107765711 -142922143 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2019 141 48 63 chr2 107765713 107766110 -142921744 - L1MA4A LINE L1 -4189 2660 2270 800 186 24 24 chr2 107766329 107766496 -142921358 + L1MC3 LINE L1 6856 7022 -763 240 284 14 0 chr2 107766514 107766588 -142921266 + MLT1F1 LTR MaLR 35 109 -458 2670 187 76 5 chr2 107766594 107767161 -142920693 + L1MC3 LINE L1 7179 7785 0 217 329 71 0 chr2 107767528 107767613 -142920241 - MIR3 SINE MIR -5 203 113 1213 221 62 42 chr2 107768585 107768942 -142918912 + L1ME3A LINE L1 5798 6161 -9 894 148 7 0 chr2 107768966 107769108 -142918746 + FRAM SINE Alu 26 168 -8 321 192 231 0 chr2 107770876 107770980 -142916874 - L1MC4a LINE L1 0 7808 7681 263 127 48 32 chr2 107770977 107771040 -142916814 - L1MC4a LINE L1 -745 7063 7000 * 217 184 0 46 chr2 107771075 107771162 -142916692 + (TCTA)n Simple_repeat Simple_repeat 2 84 0 1182 240 27 7 chr2 107771171 107771467 -142916387 - L1MC4a LINE L1 -817 6991 6690 329 134 15 15 chr2 107771630 107771697 -142916157 - L1ME4a LINE L1 -1 6120 6054 326 176 15 0 chr2 107771828 107771896 -142915958 - L1ME4a LINE L1 -267 5854 5786 2194 121 7 0 chr2 107772086 107772391 -142915463 - AluSx SINE Alu -3 309 3 233 230 44 16 chr2 107772692 107772779 -142915075 - MIR SINE MIR -77 131 43 700 259 109 49 chr2 107774979 107775326 -142912528 + LTR16A LTR ERVL 83 450 0 1151 207 0 18 chr2 107775441 107775663 -142912191 + MER20 DNA MER1_type 2 219 0 797 169 30 90 chr2 107775741 107775942 -142911912 - MER5A DNA MER1_type 0 189 1 352 85 0 0 chr2 107776405 107776452 -142911402 + L1PA8 LINE L1 6119 6165 -7 1651 160 34 14 chr2 107777644 107777938 -142909916 + AluJo SINE Alu 1 300 -12 348 165 176 24 chr2 107777982 107778067 -142909787 - FLAM_C SINE Alu -30 103 6 766 278 65 12 chr2 107778070 107778318 -142909536 - L2 LINE L2 -529 2785 2525 306 284 12 0 chr2 107778448 107778529 -142909325 - LTR16A1 LTR ERVL -2 455 374 384 234 13 0 chr2 107778573 107778650 -142909204 + MER81 DNA DNA 36 113 -1 289 279 170 74 chr2 107780140 107780452 -142907402 - L2 LINE L2 -17 3255 2914 450 273 32 13 chr2 107781415 107781565 -142906289 - LTR16A LTR ERVL -152 298 146 897 247 124 25 chr2 107781565 107781840 -142906014 + MER21B LTR ERV1 1 302 -561 321 312 37 31 chr2 107781840 107782175 -142905679 - MERVL LTR ERVL -1304 3692 3513 423 353 32 22 chr2 107782238 107782586 -142905268 - MERVL LTR ERVL -1850 3635 3343 2406 130 100 5 chr2 107782619 107783050 -142904804 - MER50 LTR ERV1 -262 472 1 636 278 125 52 chr2 107783076 107783126 -142904728 - MERVL LTR ERVL -2638 3126 3081 1634 206 18 84 chr2 107783126 107783568 -142904286 + MLT2D LTR ERVL 1 413 -1 636 278 125 52 chr2 107783568 107783862 -142903992 - MERVL LTR ERVL -2683 3081 2757 2417 322 59 21 chr2 107783890 107784265 -142903589 - MERVL LTR ERVL -2364 2632 2272 7252 159 27 11 chr2 107784265 107785475 -142902379 - Tigger3b DNA MER2_type -1 1230 1 2417 322 59 21 chr2 107785475 107787304 -142900550 - MERVL LTR ERVL -2724 2272 261 976 297 50 32 chr2 107787575 107787987 -142899867 - LTR16A LTR ERVL -1 490 18 21 0 0 0 chr2 107788251 107788272 -142899582 + AT_rich Low_complexity Low_complexity 1 21 0 653 286 107 43 chr2 107788873 107789387 -142898467 - L1ME4a LINE L1 -174 5947 5401 1739 178 19 68 chr2 107789637 107790047 -142897807 + MLT1B LTR MaLR 1 390 0 211 354 73 12 chr2 107791311 107791475 -142896379 - L2 LINE L2 -173 3099 2926 23 0 0 0 chr2 107791771 107791794 -142896060 + AT_rich Low_complexity Low_complexity 1 23 0 2022 63 66 22 chr2 107791840 107792111 -142895743 - AluY SINE Alu -4 307 25 23 0 0 0 chr2 107792790 107792813 -142895041 + AT_rich Low_complexity Low_complexity 1 23 0 283 203 0 54 chr2 107793942 107794016 -142893838 + (CATG)n Simple_repeat Simple_repeat 2 71 0 774 160 0 0 chr2 107794164 107794283 -142893571 - FLAM_C SINE Alu -2 141 23 537 364 85 24 chr2 107794687 107795017 -142892837 + L3 LINE CR1 288 637 -940 4794 202 38 11 chr2 107795326 107796547 -142891307 - L1MD2 LINE L1 0 6359 5107 4301 211 74 6 chr2 107796565 107797559 -142890295 - L1MC3 LINE L1 0 7785 6724 241 270 40 0 chr2 107797737 107797811 -142890043 + MER81 DNA DNA 1 77 -37 561 269 112 10 chr2 107797830 107798027 -142889827 + MLT1L LTR MaLR 351 567 -48 207 253 96 68 chr2 107798268 107798414 -142889440 - L2 LINE L2 -1 3312 3163 217 238 0 0 chr2 107798515 107798557 -142889297 + GA-rich Low_complexity Low_complexity 4 45 0 1976 143 3 3 chr2 107799470 107799757 -142888097 - AluSx SINE Alu -25 287 1 197 225 0 0 chr2 107800626 107800666 -142887188 - MIR3 SINE MIR -50 158 119 329 240 23 93 chr2 107800836 107800875 -142886979 + MIR SINE MIR 117 157 -105 2389 171 15 0 chr2 107800875 107801272 -142886582 + MER57A LTR ERV1 1 403 0 329 240 23 93 chr2 107801272 107801361 -142886493 + MIR SINE MIR 157 236 -26 28 29 0 0 chr2 107803139 107803174 -142884680 + AT_rich Low_complexity Low_complexity 1 35 0 197 351 0 0 chr2 107804027 107804084 -142883770 + L3b LINE CR1 1378 1434 -149 3145 178 70 46 chr2 107804527 107805056 -142882798 + L1MB3 LINE L1 5377 5931 -252 2042 118 0 17 chr2 107805056 107805345 -142882509 + AluSg SINE Alu 1 284 -26 3145 178 70 46 chr2 107805345 107805572 -142882282 + L1MB3 LINE L1 5931 6151 -32 1207 284 95 71 chr2 107805677 107806695 -142881159 + MER69B DNA AcHobo 43 1094 -1432 1102 183 5 5 chr2 107806695 107806892 -142880962 + L1PB4 LINE L1 5960 6156 0 1207 284 95 71 chr2 107806892 107807020 -142880834 + MER69B DNA AcHobo 1094 1217 -9 180 256 0 0 chr2 107807139 107807178 -142880676 + L2 LINE L2 3222 3260 -12 195 294 71 90 chr2 107807264 107807475 -142880379 + L2 LINE L2 2596 2802 -512 1782 172 34 97 chr2 107807830 107808272 -142879582 + MLT2D LTR ERVL 1 414 0 274 331 110 15 chr2 107808401 107808537 -142879317 + L2 LINE L2 3123 3271 -1 489 281 26 8 chr2 107811899 107812054 -142875800 - MIR SINE MIR -61 147 35 452 259 95 0 chr2 107812317 107812475 -142875379 + MER5B DNA MER1_type 5 177 -1 1118 190 28 40 chr2 107812595 107812842 -142875012 + MLT1E1 LTR MaLR 22 265 -389 722 269 28 13 chr2 107812884 107813028 -142874826 + MLT1E1 LTR MaLR 422 577 -77 3032 177 176 82 chr2 107813028 107813960 -142873894 + LTR28 LTR ERV1 1 1020 0 722 269 28 13 chr2 107813960 107814040 -142873814 + MLT1E1 LTR MaLR 577 654 0 25 31 0 0 chr2 107814825 107814857 -142872997 + AT_rich Low_complexity Low_complexity 1 32 0 283 252 50 17 chr2 107814900 107815019 -142872835 - L1MC5 LINE L1 -30 7931 7809 964 224 74 13 chr2 107816262 107816574 -142871280 - MER58B DNA MER1_type -2 339 9 27 0 0 0 chr2 107816649 107816676 -142871178 + AT_rich Low_complexity Low_complexity 1 27 0 215 250 0 17 chr2 107817870 107817930 -142869924 + CT-rich Low_complexity Low_complexity 3 61 0 335 272 0 0 chr2 107818375 107818467 -142869387 + G-rich Low_complexity Low_complexity 4 95 0 1368 214 101 33 chr2 107818481 107818935 -142868919 - Charlie1b DNA MER1_type 0 523 39 356 287 81 34 chr2 107819435 107819578 -142868276 - MER112 DNA MER1_type -40 220 62 201 39 0 0 chr2 107819578 107819604 -142868250 + (TG)n Simple_repeat Simple_repeat 2 27 0 356 287 81 34 chr2 107819604 107819669 -142868185 - MER112 DNA MER1_type -198 62 2 218 303 34 34 chr2 107820070 107820159 -142867695 + L2 LINE L2 2412 2500 -814 184 318 30 0 chr2 107820512 107820578 -142867276 + L2 LINE L2 3184 3251 -62 1332 241 22 27 chr2 107820687 107821052 -142866802 + MLT2D LTR ERVL 2 364 -50 1931 114 4 0 chr2 107821053 107821307 -142866547 + AluSq SINE Alu 1 255 -58 225 94 0 0 chr2 107821320 107821352 -142866502 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 27 0 0 0 chr2 107821382 107821409 -142866445 + AT_rich Low_complexity Low_complexity 1 27 0 212 0 36 0 chr2 107821629 107821657 -142866197 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1971 36 0 28 chr2 107821858 107822110 -142865744 - L1PA4 LINE L1 0 6155 5911 22 94 0 0 chr2 107823414 107823478 -142864376 + AT_rich Low_complexity Low_complexity 1 64 0 185 108 27 0 chr2 107824438 107824475 -142863379 + (CA)n Simple_repeat Simple_repeat 2 39 0 233 151 19 0 chr2 107824690 107824743 -142863111 + CT-rich Low_complexity Low_complexity 4 57 0 1494 129 105 21 chr2 107825033 107825321 -142862533 + MSTA LTR MaLR 1 331 -44 183 42 0 0 chr2 107825321 107825345 -142862509 + (TA)n Simple_repeat Simple_repeat 1 24 0 1494 129 105 21 chr2 107825345 107825395 -142862459 + MSTA LTR MaLR 331 375 0 198 0 0 0 chr2 107827110 107827132 -142860722 + (TG)n Simple_repeat Simple_repeat 2 23 0 269 339 32 38 chr2 107827145 107827331 -142860523 + MIR SINE MIR 4 188 -74 1693 190 29 16 chr2 107827798 107827942 -142859912 - L1MB4 LINE L1 -17 6163 6022 2878 109 16 9 chr2 107827942 107828329 -142859525 + MLT2A1 LTR ERVL 1 393 -51 348 24 0 0 chr2 107828329 107828370 -142859484 + (CA)n Simple_repeat Simple_repeat 2 42 0 2878 109 16 9 chr2 107828370 107828423 -142859431 + MLT2A1 LTR ERVL 393 444 0 1693 190 29 16 chr2 107828423 107828657 -142859197 - L1MB4 LINE L1 -158 6022 5780 1055 232 113 3 chr2 107828657 107828967 -142858887 + MER2 DNA MER2_type 2 345 0 2078 184 41 53 chr2 107828967 107829153 -142858701 - L1MB4 LINE L1 -398 5782 5595 1545 127 4 49 chr2 107829153 107829421 -142858433 + AluSg SINE Alu 48 304 0 2078 184 41 53 chr2 107829421 107829925 -142857929 - L1MB4 LINE L1 -585 5595 5088 1708 129 187 58 chr2 107830284 107830341 -142857513 - MSTA LTR MaLR 0 428 380 2335 56 0 11 chr2 107830341 107830649 -142857205 - AluY SINE Alu 0 305 1 1708 129 187 58 chr2 107830649 107830969 -142856885 - MSTA LTR MaLR -48 380 1 309 260 96 41 chr2 107832023 107832169 -142855685 - L2 LINE L2 -449 2865 2712 1377 228 27 9 chr2 107832571 107832905 -142854949 - MLT1A1 LTR MaLR -13 352 13 231 231 49 51 chr2 107832951 107833061 -142854793 + MIR SINE MIR 41 139 -69 222 293 37 16 chr2 107833151 107833258 -142854596 + MIR SINE MIR 49 156 -66 180 0 0 0 chr2 107834186 107834206 -142853648 + (TTG)n Simple_repeat Simple_repeat 2 21 0 246 298 167 0 chr2 107834282 107834366 -142853488 + MIR SINE MIR 2 99 -163 1761 185 96 10 chr2 107834366 107834760 -142853094 + MSTA LTR MaLR 1 428 0 926 249 158 16 chr2 107834878 107835264 -142852590 - MLT1J1 LTR MaLR -2 444 4 1313 273 104 15 chr2 107835812 107836285 -142851569 + L2 LINE L2 2264 2778 -536 1815 171 7 0 chr2 107836287 107836574 -142851280 + AluJb SINE Alu 1 289 -23 700 296 75 57 chr2 107836655 107836885 -142850969 + L2 LINE L2 2919 3161 -152 1977 71 42 46 chr2 107836885 107837192 -142850662 - AluY SINE Alu 0 306 1 700 296 75 57 chr2 107837192 107837348 -142850506 + L2 LINE L2 3161 3313 0 299 296 148 30 chr2 107837544 107837713 -142850141 + MIR3 SINE MIR 2 190 -18 945 231 46 11 chr2 107837778 107838357 -142849497 - MLT2F LTR ERVL 0 663 1 324 391 27 5 chr2 107838560 107838744 -142849110 - MIR3 SINE MIR -7 201 14 433 330 98 53 chr2 107840044 107840402 -142847452 + L3 LINE CR1 1077 1450 -127 225 0 0 0 chr2 107840496 107840521 -142847333 + (A)n Simple_repeat Simple_repeat 1 25 0 247 140 140 0 chr2 107840724 107840774 -142847080 + MER91 DNA MER1_type 8 64 -76 262 231 67 10 chr2 107841682 107841786 -142846068 - L1MB8 LINE L1 -5 6173 6064 216 0 0 0 chr2 107841793 107841817 -142846037 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr2 107841949 107841970 -142845884 + AT_rich Low_complexity Low_complexity 1 21 0 282 95 0 0 chr2 107842647 107842689 -142845165 + (TG)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr2 107842817 107842839 -142845015 + (TTTAA)n Simple_repeat Simple_repeat 3 24 0 1999 136 3 7 chr2 107842839 107843124 -142844730 - AluSx SINE Alu -26 286 1 1961 149 146 8 chr2 107843238 107843614 -142844240 - MSTA LTR MaLR 0 428 1 263 322 62 20 chr2 107843614 107843918 -142843936 + L1ME LINE L1 3791 4107 -2039 456 254 104 54 chr2 107844240 107844520 -142843334 - L2 LINE L2 0 3313 3020 512 287 139 55 chr2 107844535 107844783 -142843071 - L2 LINE L2 -410 2904 2678 188 0 74 0 chr2 107844783 107844810 -142843044 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2061 46 4 0 chr2 107844816 107845075 -142842779 - L1PA4 LINE L1 -2 6153 5894 512 287 139 55 chr2 107845075 107845314 -142842540 - L2 LINE L2 -640 2674 2368 319 276 0 9 chr2 107845321 107845437 -142842417 + L1ME LINE L1 4545 4659 -1487 21 0 0 0 chr2 107846609 107846630 -142841224 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr2 107847192 107847215 -142840639 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 189 0 0 0 chr2 107847907 107847928 -142839926 + (TTTTTA)n Simple_repeat Simple_repeat 3 23 0 2516 45 3 0 chr2 107847929 107848242 -142839612 - L1PA4 LINE L1 -3 6152 5839 3744 171 11 11 chr2 107848436 107849222 -142838632 + L1MA6 LINE L1 4521 5306 -840 16771 172 49 11 chr2 107849271 107856590 -142831264 + L1PA14 LINE L1 5 7598 -1 4647 151 37 33 chr2 107856635 107857101 -142830753 + L1MA6 LINE L1 5318 5781 -519 207 0 0 0 chr2 107857101 107857124 -142830730 + (CA)n Simple_repeat Simple_repeat 2 24 0 4647 151 37 33 chr2 107857124 107857632 -142830222 + L1MA6 LINE L1 5781 6296 -4 255 313 48 0 chr2 107857647 107857730 -142830124 - MIR SINE MIR 0 262 176 254 333 44 44 chr2 107857823 107858003 -142829851 + L1ME LINE L1 5311 5490 -631 2233 79 0 4 chr2 107858003 107858282 -142829572 + AluY SINE Alu 22 299 -12 254 333 44 44 chr2 107858282 107858464 -142829390 + L1ME LINE L1 5489 5673 -448 234 322 7 7 chr2 107858468 107858611 -142829243 + L1ME LINE L1 5721 5863 -258 344 298 83 29 chr2 107858981 107859186 -142828668 + L1MEd LINE L1 991 1206 -4913 299 270 107 26 chr2 107859485 107859718 -142828136 + L1M4 LINE L1 4497 4748 -1398 31 44 0 0 chr2 107860011 107860056 -142827798 + AT_rich Low_complexity Low_complexity 1 45 0 2778 122 12 21 chr2 107860056 107860538 -142827316 - L1MA2 LINE L1 -104 6200 5723 9364 158 38 27 chr2 107860547 107863769 -142824085 - L1 LINE L1 -2227 5338 2073 2442 229 21 17 chr2 107863767 107864348 -142823506 - L1 LINE L1 -6972 593 11 * 2272 92 0 0 chr2 107864353 107864647 -142823207 - AluY SINE Alu -17 294 1 223 148 16 16 chr2 107864757 107864818 -142823036 + A-rich Low_complexity Low_complexity 6 66 0 411 145 0 0 chr2 107864927 107865003 -142822851 - L1PA8 LINE L1 -2243 3903 3828 9922 105 9 0 chr2 107865003 107867258 -142820596 + L1PA8 LINE L1 3896 6170 -2 681 303 138 58 chr2 107867797 107868303 -142819551 + HAL1 LINE L1 1803 2370 -137 823 165 38 0 chr2 107868303 107868461 -142819393 + L1MA5A LINE L1 6122 6285 -12 681 303 138 58 chr2 107868461 107868578 -142819276 + HAL1 LINE L1 2370 2476 -31 23 54 0 0 chr2 107869836 107869873 -142817981 + AT_rich Low_complexity Low_complexity 1 37 0 2213 108 32 0 chr2 107871407 107871542 -142816312 - L1PB2 LINE L1 -3 6148 6014 8489 184 5 12 chr2 107871542 107871811 -142816043 - L1PB1 LINE L1 -156 6018 5749 342 67 0 0 chr2 107871811 107871856 -142815998 + (TG)n Simple_repeat Simple_repeat 2 46 0 8489 184 5 12 chr2 107871856 107874241 -142813613 - L1PB1 LINE L1 -425 5749 3417 190 232 161 0 chr2 107875354 107875410 -142812444 + L2 LINE L2 3247 3311 -2 36 0 0 0 chr2 107875601 107875637 -142812217 + AT_rich Low_complexity Low_complexity 1 36 0 712 269 43 5 chr2 107878527 107878735 -142809119 - MIR SINE MIR -14 248 33 28 29 0 0 chr2 107879332 107879367 -142808487 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr2 107879398 107879429 -142808425 + AT_rich Low_complexity Low_complexity 1 31 0 472 219 0 0 chr2 107879926 107880022 -142807832 + FLAM_A SINE Alu 1 96 -46 213 94 0 0 chr2 107880042 107880074 -142807780 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 468 223 9 0 chr2 107880136 107880248 -142807606 + L1ME3A LINE L1 6048 6160 -10 212 333 0 11 chr2 107880843 107880930 -142806924 + CT-rich Low_complexity Low_complexity 2 87 0 184 158 0 79 chr2 107881421 107881459 -142806395 + L2 LINE L2 2880 2914 -358 218 250 231 28 chr2 107881527 107881635 -142806219 + MIR SINE MIR 132 261 -1 635 286 6 92 chr2 107881785 107882131 -142805723 + L2 LINE L2 2997 3312 -1 401 314 120 5 chr2 107882228 107882419 -142805435 + MIR SINE MIR 21 233 -29 348 24 0 0 chr2 107882488 107882529 -142805325 + (CA)n Simple_repeat Simple_repeat 2 42 0 1874 257 48 22 chr2 107882668 107883271 -142804583 + MLT1E2 LTR MaLR 5 623 -3 520 92 53 0 chr2 107935659 107935735 -142752119 - MADE1 DNA Mariner 0 80 1 768 321 34 0 chr2 107936328 107936565 -142751289 + MIR SINE MIR 12 256 -6 189 0 0 0 chr2 107937296 107937317 -142750537 + (T)n Simple_repeat Simple_repeat 1 21 0 584 239 96 29 chr2 107939475 107939747 -142748107 + LTR33 LTR ERVL 232 521 0 268 341 80 22 chr2 107939892 107940030 -142747824 - MIR SINE MIR 0 262 117 209 206 0 15 chr2 107940406 107940474 -142747380 + GA-rich Low_complexity Low_complexity 2 68 0 1332 294 117 10 chr2 107941059 107941444 -142746410 + L2 LINE L2 1709 2180 -1134 1409 176 65 17 chr2 107941444 107941734 -142746120 - AluJo SINE Alu -8 304 1 1332 294 117 10 chr2 107941734 107941939 -142745915 + L2 LINE L2 2180 2362 -952 2853 58 3 0 chr2 107941963 107942325 -142745529 + L1PA8 LINE L1 5805 6167 -5 5218 157 30 15 chr2 107942325 107942835 -142745019 - L1MA6 LINE L1 -8 6292 5791 315 0 0 0 chr2 107942835 107942870 -142744984 + (TG)n Simple_repeat Simple_repeat 2 36 0 5218 157 30 15 chr2 107942870 107944070 -142743784 - L1MA6 LINE L1 -509 5791 4562 926 348 93 35 chr2 107944096 107944958 -142742896 + L2 LINE L2 2375 3297 -16 366 23 0 0 chr2 107945038 107945081 -142742773 + (TG)n Simple_repeat Simple_repeat 1 43 0 306 0 0 0 chr2 107945091 107945125 -142742729 + (GA)n Simple_repeat Simple_repeat 2 35 0 877 279 7 33 chr2 107945161 107945433 -142742421 + L1MC4 LINE L1 6738 7002 -1040 202 133 44 22 chr2 107946695 107946740 -142741114 + T-rich Low_complexity Low_complexity 5 50 0 318 297 99 0 chr2 107948231 107948322 -142739532 + L2 LINE L2 3202 3301 -12 517 150 35 26 chr2 107948654 107948767 -142739087 - MER58 DNA MER1_type -1 2419 2306 248 286 16 0 chr2 107949216 107949279 -142738575 - MER58 DNA MER1_type -320 66 3 2484 87 0 0 chr2 107950367 107950677 -142737177 + AluSx SINE Alu 3 312 0 304 296 9 9 chr2 107951473 107951581 -142736273 - MIR SINE MIR -5 257 150 268 210 101 42 chr2 107951575 107951694 -142736160 + L2 LINE L2 3188 3313 0 * 277 292 22 34 chr2 107951703 107951792 -142736062 - MIR SINE MIR -134 128 41 2325 91 17 0 chr2 107952967 107953265 -142734589 - AluSx SINE Alu -9 303 1 2070 167 3 3 chr2 107953315 107953663 -142734191 + MER7A DNA MER2_type 1 346 0 249 221 0 0 chr2 107953663 107953731 -142734123 + (TA)n Simple_repeat Simple_repeat 1 68 0 244 239 45 11 chr2 107954563 107954651 -142733203 - L1ME LINE L1 -5979 91 1 270 56 0 0 chr2 107955663 107955699 -142732155 + (CA)n Simple_repeat Simple_repeat 2 37 0 2156 149 13 28 chr2 107956177 107956573 -142731281 + MLT1B LTR MaLR 1 390 0 5211 196 81 52 chr2 107957050 107957406 -142730448 - L1MC3 LINE L1 0 7785 7441 1832 117 0 8 chr2 107957406 107957833 -142730021 - AluSx SINE Alu 0 453 29 5211 196 81 52 chr2 107957833 107959041 -142728813 - L1MC3 LINE L1 -344 7441 6174 319 274 111 20 chr2 107959057 107959188 -142728666 - MIR SINE MIR -63 145 45 1003 222 23 28 chr2 107959689 107960003 -142727851 - MLT2D LTR ERVL -46 474 66 646 238 51 76 chr2 107960759 107961230 -142726624 - L1MC5 LINE L1 -25 7936 7478 951 244 76 79 chr2 107961544 107961615 -142726239 - L1MC5 LINE L1 -737 7224 7154 2018 106 25 3 chr2 107961615 107961898 -142725956 - AluSx SINE Alu -7 305 17 951 244 76 79 chr2 107961898 107962500 -142725354 - L1MC5 LINE L1 -807 7154 6554 362 250 66 13 chr2 107965779 107965931 -142721923 + L1ME4a LINE L1 5725 5884 -237 373 284 204 5 chr2 107966817 107967018 -142720836 - MIR SINE MIR -2 260 20 294 288 128 0 chr2 107968346 107968471 -142719383 + MIR SINE MIR 51 191 -71 972 151 32 6 chr2 107968623 107968906 -142718948 - THE1B LTR MaLR 0 364 1 1616 144 65 0 chr2 107969537 107969832 -142718022 + AluSx SINE Alu 6 317 0 684 231 99 0 chr2 107970218 107970399 -142717455 - MLT1E1 LTR MaLR -5 649 451 1091 211 44 90 chr2 107970399 107970936 -142716918 - MER39 LTR ERV1 0 687 4 720 209 104 52 chr2 107970949 107971198 -142716656 - MLT1E1 LTR MaLR -211 443 182 4818 198 74 78 chr2 107971205 107972884 -142714970 + L1MCa LINE L1 23 1694 -4732 10784 186 48 12 chr2 107972949 107974216 -142713638 + L1PA13 LINE L1 1 1373 -5414 219 69 0 0 chr2 107974216 107974245 -142713609 + (CTG)n Simple_repeat Simple_repeat 1 29 0 10784 186 48 12 chr2 107974245 107975072 -142712782 + L1PA13 LINE L1 1373 2169 -4618 544 172 26 0 chr2 107975088 107975204 -142712650 - L1P LINE L1 -3528 2618 2500 7628 27 1 0 chr2 107975205 107976577 -142711277 + L1PA4 LINE L1 4783 6155 0 5423 257 17 14 chr2 107976579 107978550 -142709304 + L1MCa LINE L1 2350 4326 -2100 395 260 34 1 chr2 107978551 107978710 -142709144 - MLT1E LTR MaLR -455 199 17 270 0 0 0 chr2 107978721 107978751 -142709103 + (TG)n Simple_repeat Simple_repeat 1 30 0 1825 134 51 45 chr2 107978751 107979125 -142708729 - Tigger2a DNA MER2_type -54 380 5 258 32 0 0 chr2 107979136 107979167 -142708687 + (CA)n Simple_repeat Simple_repeat 2 32 0 526 258 36 37 chr2 107979209 107979436 -142708418 - L1MC4a LINE L1 -302 5819 5675 236 270 46 33 chr2 107979927 107980079 -142707775 - L1MC4a LINE L1 -2400 5408 5255 860 325 94 39 chr2 107980288 107981138 -142706716 - L1MC4a LINE L1 -1038 5108 4212 259 239 142 0 chr2 107981234 107981347 -142706507 - MER20B DNA MER1_type -138 645 517 478 187 11 0 chr2 107981435 107981526 -142706328 - MER45 DNA AcHobo -1 1580 1489 * 1932 328 10 3 chr2 107981524 107982198 -142705656 - MER45C DNA AcHobo -271 682 4 1178 282 51 7 chr2 107982227 107982638 -142705216 + MER20B DNA MER1_type 26 454 -329 427 216 15 60 chr2 107982816 107983015 -142704839 + MER20B DNA MER1_type 526 715 -68 445 246 101 40 chr2 107983036 107983313 -142704541 - L1MC4a LINE L1 -2056 4090 3797 2397 97 3 0 chr2 107984458 107984768 -142703086 + AluSx SINE Alu 1 311 -1 476 246 128 42 chr2 107984898 107985211 -142702643 - L1MC4 LINE L1 -147 7895 7556 21 0 0 0 chr2 107985913 107985934 -142701920 + AT_rich Low_complexity Low_complexity 1 21 0 2169 112 3 0 chr2 107986588 107986874 -142700980 + AluSp SINE Alu 1 287 -26 300 333 39 16 chr2 107986968 107987097 -142700757 - L2 LINE L2 0 3313 3182 208 303 134 42 chr2 107987338 107987480 -142700374 + L2 LINE L2 3159 3313 0 249 270 43 26 chr2 107987640 107987755 -142700099 - MARNA DNA Mariner -94 492 376 234 333 14 0 chr2 107987844 107987913 -142699941 + L2 LINE L2 3239 3308 -5 287 225 56 11 chr2 107987935 107988024 -142699830 - MARNA DNA Mariner -345 241 149 1981 144 94 32 chr2 107988058 107988461 -142699393 - MSTA LTR MaLR 0 428 1 196 203 188 14 chr2 107988929 107988998 -142698856 + L2 LINE L2 2456 2536 -778 23 33 0 0 chr2 107989523 107989553 -142698301 + AT_rich Low_complexity Low_complexity 1 30 0 191 271 17 17 chr2 107990090 107990149 -142697705 + L2 LINE L2 3239 3297 -16 345 194 65 58 chr2 107991989 107992128 -142695726 - LTR16A1 LTR ERVL -160 297 158 689 321 169 44 chr2 107992328 107992997 -142694857 - L3 LINE CR1 -384 1193 402 2165 131 3 0 chr2 107992997 107993302 -142694552 + AluSx SINE Alu 1 306 -6 689 321 169 44 chr2 107993302 107993448 -142694406 - L3 LINE CR1 -1175 402 276 1183 199 84 11 chr2 107993521 107993877 -142693977 - LTR48 LTR ERV1 -57 730 349 350 181 12 24 chr2 107993888 107993971 -142693883 - LTR49 LTR ERV1 -448 147 66 3610 152 67 77 chr2 107993976 107994620 -142693234 - LTR49-int LTR ERV1 -8 6323 5674 938 17 17 0 chr2 107994620 107994735 -142693119 + L1PA4 LINE L1 6037 6153 -2 3610 152 67 77 chr2 107994735 107994868 -142692986 - LTR49-int LTR ERV1 -657 5674 5541 192 77 0 0 chr2 107994868 107994894 -142692960 + (TA)n Simple_repeat Simple_repeat 2 27 0 3610 152 67 77 chr2 107994894 107995071 -142692783 - LTR49-int LTR ERV1 -790 5541 5378 522 233 26 9 chr2 107995071 107995187 -142692667 + FLAM_C SINE Alu 1 118 -25 6070 174 39 53 chr2 107995208 107996623 -142691231 - LTR49-int LTR ERV1 -946 5385 3993 2340 89 3 3 chr2 107996623 107996927 -142690927 + AluSc SINE Alu 1 304 -5 6070 174 39 53 chr2 107996927 107997070 -142690784 - LTR49-int LTR ERV1 -2338 3993 3849 644 159 116 27 chr2 107997070 107997216 -142690638 - LTR49-int LTR ERV1 -271 1515 1358 180 0 0 0 chr2 107997225 107997245 -142690609 + (TATATG)n Simple_repeat Simple_repeat 4 23 0 1256 238 19 3 chr2 107997245 107997552 -142690302 - LTR48-int LTR ERV1 -4228 2103 1792 270 284 30 0 chr2 107998449 107998516 -142689338 - tRNA-Glu-GAG tRNA tRNA 0 75 7 431 228 117 33 chr2 107998535 107998715 -142689139 - LTR48-int LTR ERV1 -5138 1193 999 21 36 0 0 chr2 107998718 107998746 -142689108 + AT_rich Low_complexity Low_complexity 1 28 0 296 272 34 92 chr2 107998787 107998993 -142688861 - LTR48-int LTR ERV1 -6137 194 1 998 212 85 63 chr2 107999014 107999636 -142688218 - LTR48 LTR ERV1 -33 754 1 2089 170 101 24 chr2 107999925 108000007 -142687847 - MER34C LTR ERV1 0 585 511 4242 167 27 48 chr2 108000007 108000929 -142686925 - MER4D LTR ERV1 0 903 1 2089 170 101 24 chr2 108000929 108001352 -142686502 - MER34C LTR ERV1 -74 511 41 1720 219 20 5 chr2 108001443 108001840 -142686014 + MER57A LTR ERV1 1 403 0 2789 207 12 80 chr2 108001842 108002220 -142685634 + MER57A-int LTR ERV1 3 405 -7132 2134 111 3 7 chr2 108002220 108002579 -142685275 + AluSx SINE Alu 1 312 0 2789 207 12 80 chr2 108002579 108002746 -142685108 + MER57A-int LTR ERV1 405 484 -7053 2964 167 9 73 chr2 108002746 108003269 -142684585 + LTR9 LTR ERV1 1 475 -137 2170 140 0 0 chr2 108003269 108003576 -142684278 - AluSx SINE Alu 0 312 6 2964 167 9 73 chr2 108003576 108003706 -142684148 + LTR9 LTR ERV1 475 612 0 2789 207 12 80 chr2 108003706 108003926 -142683928 + MER57A-int LTR ERV1 484 717 -6820 3610 188 0 15 chr2 108003940 108004675 -142683179 + MER57A-int LTR ERV1 5098 5821 -1716 5917 211 17 15 chr2 108005003 108006295 -142681559 + MER57A-int LTR ERV1 5824 7118 -419 564 195 34 27 chr2 108006298 108006447 -142681407 + LTR54B LTR ERV1 1 150 -348 426 175 0 21 chr2 108006486 108006583 -142681271 + MER57A-int LTR ERV1 7443 7537 0 1704 234 15 5 chr2 108006585 108006982 -142680872 + MER57A LTR ERV1 3 403 0 2198 68 7 52 chr2 108007426 108007735 -142680119 - AluY SINE Alu 0 311 17 249 299 13 0 chr2 108008140 108008217 -142679637 + MIR SINE MIR 179 256 -6 22 0 0 0 chr2 108008218 108008240 -142679614 + AT_rich Low_complexity Low_complexity 1 22 0 226 286 0 18 chr2 108008766 108008822 -142679032 - MER5C DNA MER1_type -269 55 1 21 57 0 0 chr2 108009441 108009476 -142678378 + AT_rich Low_complexity Low_complexity 1 35 0 470 298 29 34 chr2 108009991 108010199 -142677655 - L1ME3A LINE L1 -62 6108 5902 1792 202 3 6 chr2 108010202 108010559 -142677295 - MLT1A1 LTR MaLR 0 365 10 294 128 20 69 chr2 108010581 108010683 -142677171 + (TTTA)n Simple_repeat Simple_repeat 3 99 0 425 285 101 21 chr2 108010696 108010984 -142676870 - L1MEc LINE L1 -1818 5123 4813 205 211 0 22 chr2 108010987 108011077 -142676777 + (TA)n Simple_repeat Simple_repeat 1 88 0 314 280 0 43 chr2 108011079 108011172 -142676682 + L1MC4 LINE L1 6615 6703 -1339 * 320 195 46 46 chr2 108011120 108011207 -142676647 - L1MC4 LINE L1 -1339 6703 6617 238 172 0 35 chr2 108011237 108011295 -142676559 + (TA)n Simple_repeat Simple_repeat 2 57 0 995 277 90 64 chr2 108011327 108011480 -142676374 - L1MEc LINE L1 -2222 4719 4571 2194 148 120 5 chr2 108011480 108011864 -142675990 + MSTA LTR MaLR 1 428 0 995 277 90 64 chr2 108011864 108013266 -142674588 - L1MEc LINE L1 -2370 4571 3124 772 261 88 64 chr2 108013268 108013800 -142674054 + MER41C LTR ERV1 1 545 -9 285 29 0 0 chr2 108013926 108013960 -142673894 + (TG)n Simple_repeat Simple_repeat 2 35 0 1439 231 28 32 chr2 108014092 108014545 -142673309 + LTR56 LTR ERV1 12 437 0 488 236 69 7 chr2 108014547 108014691 -142673163 - L1ME3A LINE L1 -34 6136 5984 5353 128 27 2 chr2 108015372 108016432 -142671422 - L1PB2 LINE L1 -2 6149 5053 1780 239 45 10 chr2 108016438 108016949 -142670905 - L1PBa LINE L1 -6328 535 7 382 309 50 22 chr2 108016992 108017173 -142670681 - L1MEc LINE L1 -4159 2963 2778 721 295 50 42 chr2 108017330 108017875 -142669979 - L1MEc LINE L1 -4594 2528 1980 21 36 0 0 chr2 108017993 108018021 -142669833 + AT_rich Low_complexity Low_complexity 1 28 0 272 298 21 11 chr2 108018071 108018259 -142669595 - L1MEc LINE L1 -4954 1469 1280 1106 203 157 35 chr2 108018525 108018786 -142669068 - AluJb SINE Alu -9 293 1 6152 232 58 12 chr2 108019089 108021025 -142666829 + L1MB2 LINE L1 2530 4554 -1592 9052 149 35 6 chr2 108021038 108022624 -142665230 + L1PA8 LINE L1 10 1641 -4820 14194 111 6 3 chr2 108022629 108025583 -142662271 + L1PA8 LINE L1 3520 6487 0 4102 211 24 25 chr2 108025599 108027237 -142660617 + L1MB2 LINE L1 4532 6170 -1 305 307 205 0 chr2 108027858 108027985 -142659869 + MER91A DNA MER1_type 44 196 0 209 224 20 0 chr2 108028621 108028670 -142659184 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 238 152 22 0 chr2 108028677 108028723 -142659131 + MLT1E1 LTR MaLR 1 47 -607 1083 220 55 84 chr2 108028732 108029114 -142658740 + MLT1E1 LTR MaLR 278 648 -6 2106 132 3 0 chr2 108030269 108030573 -142657281 - AluSq SINE Alu -8 305 1 311 325 28 32 chr2 108034668 108034940 -142652914 - L1M3a LINE L1 -5226 729 280 1227 325 4 15 chr2 108035195 108035651 -142652203 - L1M3a LINE L1 -5503 452 2 7758 218 41 12 chr2 108035974 108039349 -142648505 - L1MC1 LINE L1 -52 6281 2804 21 57 0 0 chr2 108040017 108040052 -142647802 + AT_rich Low_complexity Low_complexity 1 35 0 183 100 0 0 chr2 108040111 108040141 -142647713 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 882 253 67 12 chr2 108040316 108040720 -142647134 - MER114 LTR ERV 0 648 223 761 173 93 0 chr2 108040754 108040904 -142646950 + AluJb SINE Alu 136 299 -13 582 203 33 13 chr2 108040930 108041083 -142646771 - MER114 LTR ERV -492 156 1 359 236 75 38 chr2 108042633 108042739 -142645115 - MIR SINE MIR -88 174 65 221 216 20 0 chr2 108043343 108043394 -142644460 + A-rich Low_complexity Low_complexity 4 55 0 213 193 35 18 chr2 108044566 108044623 -142643231 + GA-rich Low_complexity Low_complexity 5 62 0 1977 198 26 67 chr2 108044916 108045497 -142642357 - MER74A LTR ERVL -1 557 1 212 207 190 0 chr2 108045725 108045783 -142642071 - L2 LINE L2 -1 3271 3203 1022 293 137 8 chr2 108045788 108046256 -142641598 + MLT1H LTR MaLR 6 533 -16 3033 108 5 2 chr2 108046524 108046969 -142640885 - MLT2A2 LTR ERVL -7 446 1 372 133 0 0 chr2 108047044 108047104 -142640750 + (TG)n Simple_repeat Simple_repeat 1 60 0 288 270 36 63 chr2 108047129 108047240 -142640614 - L2 LINE L2 -508 2806 2699 433 299 36 36 chr2 108048218 108048385 -142639469 - MIR SINE MIR -76 186 20 775 283 50 17 chr2 108048742 108049042 -142638812 + MLT1J LTR MaLR 28 337 -174 253 372 22 15 chr2 108049849 108049986 -142637868 + MIR SINE MIR 15 152 -110 2284 91 0 3 chr2 108051155 108051452 -142636402 + AluSc SINE Alu 1 296 -13 636 228 14 81 chr2 108052082 108052293 -142635561 - MER20 DNA MER1_type -3 216 20 780 295 56 83 chr2 108052588 108053330 -142634524 - L2 LINE L2 -2 3311 2583 1293 216 19 38 chr2 108053790 108054160 -142633694 - MLT1A1 LTR MaLR 0 365 3 441 99 0 0 chr2 108054607 108054678 -142633176 + L1MA2 LINE L1 6232 6302 -2 313 279 16 8 chr2 108055576 108055705 -142632149 + LTR33 LTR ERVL 380 509 -12 186 244 0 0 chr2 108056167 108056208 -142631646 + MIR3 SINE MIR 157 197 -11 1185 276 81 56 chr2 108056376 108056460 -142631394 - L1M4 LINE L1 -2472 3674 3594 318 50 0 0 chr2 108056467 108056507 -142631347 + (TG)n Simple_repeat Simple_repeat 1 40 0 1980 132 3 3 chr2 108056507 108056787 -142631067 - AluSp SINE Alu -30 283 1 1185 276 81 56 chr2 108056787 108057058 -142630796 - L1M4 LINE L1 -2552 3594 3331 1398 206 0 44 chr2 108057058 108057376 -142630478 - AluJo SINE Alu 0 306 2 1185 276 81 56 chr2 108057376 108057587 -142630267 - L1M4 LINE L1 -2815 3331 3127 1988 134 44 16 chr2 108057587 108057952 -142629902 + THE1C LTR MaLR 1 375 0 1185 276 81 56 chr2 108057952 108058910 -142628944 - L1M4 LINE L1 -3019 3127 2110 31 26 0 0 chr2 108058987 108059025 -142628829 + AT_rich Low_complexity Low_complexity 1 38 0 225 208 0 19 chr2 108059337 108059390 -142628464 + T-rich Low_complexity Low_complexity 3 54 0 1304 242 49 75 chr2 108059396 108060045 -142627809 - L1MC4 LINE L1 0 8042 7411 553 159 28 62 chr2 108060108 108060253 -142627601 - L1MC4a LINE L1 -495 7313 7174 321 331 103 6 chr2 108060274 108060449 -142627405 + L1MEc LINE L1 1510 1701 -4695 34 65 0 0 chr2 108060456 108060518 -142627336 + AT_rich Low_complexity Low_complexity 1 62 0 236 268 18 0 chr2 108061318 108061385 -142626469 + L3 LINE CR1 1514 1581 -2 459 297 31 36 chr2 108063845 108064037 -142623817 + MIR SINE MIR 21 211 -51 258 267 113 60 chr2 108064449 108064599 -142623255 + MIR SINE MIR 92 249 -13 592 245 97 5 chr2 108064732 108064928 -142622926 - LTR33A LTR ERVL -23 500 287 * 886 277 88 16 chr2 108064922 108065287 -142622567 - LTR33A LTR ERVL -131 392 2 347 256 116 39 chr2 108065503 108065632 -142622222 - MIR SINE MIR -104 158 20 724 324 61 25 chr2 108066661 108066988 -142620866 - L2 LINE L2 -15 3298 2960 232 246 229 33 chr2 108067985 108068107 -142619747 + MIR3 SINE MIR 18 163 -45 1690 219 75 45 chr2 108068391 108068922 -142618932 - L1MCa LINE L1 -5851 575 29 539 262 29 29 chr2 108068984 108069156 -142618698 - MER5B DNA MER1_type -6 172 1 1065 191 11 0 chr2 108069784 108069972 -142617882 + MER3 DNA MER1_type 20 209 0 1253 234 94 6 chr2 108071830 108072180 -142615674 - MER63 DNA MER1_type -1 1060 680 247 296 12 71 chr2 108074009 108074136 -142613718 + MIR SINE MIR 34 151 -61 213 214 0 54 chr2 108075596 108075652 -142612202 + (CA)n Simple_repeat Simple_repeat 1 53 0 2229 111 3 0 chr2 108075710 108076008 -142611846 + AluSp SINE Alu 3 301 -12 1795 280 121 22 chr2 108076429 108077319 -142610535 - L1ME3A LINE L1 0 6170 5090 1460 176 20 37 chr2 108077319 108077615 -142610239 - AluJo SINE Alu -1 311 21 1795 280 121 22 chr2 108077615 108077847 -142610007 - L1ME3A LINE L1 -1080 5090 4882 335 297 18 9 chr2 108078405 108078516 -142609338 - LTR16A LTR ERVL -207 243 132 234 396 0 10 chr2 108079475 108079576 -142608278 - MIR SINE MIR -162 100 1 483 202 0 0 chr2 108079599 108079728 -142608126 + (CA)n Simple_repeat Simple_repeat 2 130 0 43508 51 3 2 chr2 108079819 108085971 -142601883 - L1PA4 LINE L1 0 6155 1 862 273 25 7 chr2 108086310 108086596 -142601258 - L1ME4a LINE L1 -234 5887 5597 22 35 0 0 chr2 108087030 108087059 -142600795 + AT_rich Low_complexity Low_complexity 1 29 0 1010 216 33 0 chr2 108087480 108087693 -142600161 + MER34 LTR ERV1 7 226 -316 1928 134 3 24 chr2 108137982 108138312 -142549542 - AluSx SINE Alu 0 324 1 304 270 141 31 chr2 108138543 108138706 -142549148 - MER5A DNA MER1_type 0 189 9 26 0 0 0 chr2 108140923 108140949 -142546905 + AT_rich Low_complexity Low_complexity 1 26 0 2279 104 0 3 chr2 108141129 108141426 -142546428 + AluSx SINE Alu 1 296 -16 24 0 0 0 chr2 108141810 108141834 -142546020 + AT_rich Low_complexity Low_complexity 1 24 0 33 0 0 0 chr2 108142140 108142173 -142545681 + AT_rich Low_complexity Low_complexity 1 33 0 600 236 35 0 chr2 108142193 108142367 -142545487 - L1PA16 LINE L1 -1517 4629 4450 5059 141 33 10 chr2 108142367 108143147 -142544707 + L1PA16 LINE L1 4611 5372 -794 2231 121 3 0 chr2 108143147 108143454 -142544400 + AluSq SINE Alu 1 308 -5 5059 141 33 10 chr2 108143454 108144200 -142543654 + L1PA16 LINE L1 5372 6162 -4 2245 85 0 4 chr2 108144276 108144578 -142543276 + AluSg SINE Alu 1 301 0 5119 177 20 16 chr2 108144687 108146666 -142541188 - L1MA6 LINE L1 0 6300 4314 483 238 48 57 chr2 108146808 108147056 -142540798 - L1MC4a LINE L1 -1862 5946 5701 934 240 19 54 chr2 108147226 108147541 -142540313 + MLT2B1 LTR ERVL 3 405 -115 8063 195 36 24 chr2 108148379 108150306 -142537548 + L1MC3 LINE L1 5553 7503 -282 3919 169 7 30 chr2 108150341 108151071 -142536783 + MER54B LTR ERVL 81 793 0 1325 158 40 4 chr2 108151071 108151349 -142536505 + L1MC3 LINE L1 7498 7785 0 228 200 117 8 chr2 108151368 108151488 -142536366 + L1M LINE L1 5297 5429 -2379 2055 226 102 0 chr2 108151555 108152028 -142535826 + MLT1F1 LTR MaLR 2 522 -45 231 333 0 0 chr2 108152028 108152106 -142535748 + GA-rich Low_complexity Low_complexity 3 80 0 21 36 0 0 chr2 108152694 108152722 -142535132 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr2 108153514 108153550 -142534304 + AT_rich Low_complexity Low_complexity 1 36 0 416 234 63 9 chr2 108154718 108154829 -142533025 - MIR SINE MIR -21 241 125 189 171 0 0 chr2 108155179 108155214 -142532640 + GA-rich Low_complexity Low_complexity 4 38 0 216 288 34 0 chr2 108155227 108155264 -142532590 - L2 LINE L2 -16 3256 3215 3229 120 16 4 chr2 108155264 108155755 -142532099 + LOR1a LTR ERV1 1 497 0 216 288 34 0 chr2 108155755 108155776 -142532078 - L2 LINE L2 -57 3215 3196 * 219 316 71 0 chr2 108155774 108155872 -142531982 - MIR SINE MIR -112 150 46 192 333 194 0 chr2 108156299 108156407 -142531447 + L2 LINE L2 2932 3060 -212 305 281 80 23 chr2 108156615 108156957 -142530897 - LTR16C LTR ERVL -10 481 79 276 315 63 47 chr2 108157098 108157225 -142530629 + L2 LINE L2 3185 3313 0 229 116 105 23 chr2 108157568 108157654 -142530200 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 322 290 42 2 chr2 108157761 108157888 -142529966 - MIR SINE MIR -68 140 6 280 272 8 16 chr2 108159029 108159154 -142528700 - L1M4 LINE L1 -3010 3136 3013 250 360 12 0 chr2 108159421 108159507 -142528347 + MER91B DNA MER1_type 5 91 -99 451 133 41 20 chr2 108159508 108159606 -142528248 + MLT1A1 LTR MaLR 1 100 -265 668 175 0 8 chr2 108159628 108159748 -142528106 + MLT1A1 LTR MaLR 246 364 -1 229 275 29 0 chr2 108159748 108159817 -142528037 + MER91B DNA MER1_type 89 159 -31 279 0 0 0 chr2 108160740 108160771 -142527083 + (CA)n Simple_repeat Simple_repeat 2 32 0 213 175 12 125 chr2 108160959 108161039 -142526815 - MIR SINE MIR -70 192 122 591 223 160 67 chr2 108162204 108162334 -142525520 + MSTD LTR MaLR 1 117 -279 2557 110 3 0 chr2 108162334 108162697 -142525157 + THE1B LTR MaLR 1 364 0 591 223 160 67 chr2 108162697 108162917 -142524937 + MSTD LTR MaLR 117 396 0 1601 182 42 72 chr2 108163700 108164102 -142523752 + MLT1B LTR MaLR 1 390 0 374 248 39 16 chr2 108164226 108164355 -142523499 + MER94 DNA DNA 1 132 -2 301 230 65 88 chr2 108164420 108164637 -142523217 - L1MC5 LINE L1 -490 7471 7260 2098 117 13 16 chr2 108164666 108164974 -142522880 + AluSq SINE Alu 1 307 -6 994 241 69 59 chr2 108165071 108165581 -142522273 - L1MC5 LINE L1 -728 7233 6719 4773 156 25 35 chr2 108165584 108166210 -142521644 + Tigger3b DNA MER2_type 1 615 -2413 2111 119 6 6 chr2 108166210 108166521 -142521333 + AluY SINE Alu 1 311 0 4773 156 25 35 chr2 108166521 108166830 -142521024 + Tigger3b DNA MER2_type 615 926 -305 6014 114 163 34 chr2 108166840 108168215 -142519639 + pTR5 LTR ERV1 276 2295 -143 1593 153 37 14 chr2 108168218 108168512 -142519342 + Tigger3b DNA MER2_type 931 1231 0 300 318 205 13 chr2 108168805 108168956 -142518898 - L1MC5 LINE L1 -2199 5609 5430 356 218 30 10 chr2 108168956 108169057 -142518797 + Charlie4 DNA MER1_type 1822 1924 -37 342 179 54 9 chr2 108169221 108169333 -142518521 - L1MC5 LINE L1 -2401 5407 5291 23 33 0 0 chr2 108169398 108169428 -142518426 + AT_rich Low_complexity Low_complexity 1 30 0 300 288 26 33 chr2 108169499 108169652 -142518202 - L1MC5 LINE L1 -1015 5131 4980 180 0 0 0 chr2 108169785 108169805 -142518049 + (A)n Simple_repeat Simple_repeat 1 20 0 2098 65 0 0 chr2 108170165 108170427 -142517427 - AluY SINE Alu -11 300 39 858 286 82 50 chr2 108170677 108171478 -142516376 - HAL1b LINE L1 -6 1342 516 319 226 12 12 chr2 108171503 108171587 -142516267 - MLT1I LTR MaLR -7 402 319 241 280 83 38 chr2 108171653 108171810 -142516044 - MLT1J2 LTR MaLR -215 235 72 348 202 0 11 chr2 108172134 108172223 -142515631 - L1MA10 LINE L1 0 6334 6247 280 212 35 0 chr2 108172603 108172688 -142515166 + CT-rich Low_complexity Low_complexity 3 90 0 418 318 37 48 chr2 108173435 108173624 -142514230 + MER5A DNA MER1_type 3 189 0 2341 271 92 23 chr2 108174644 108174771 -142513083 + L1MEc LINE L1 2004 2121 -4094 195 42 0 0 chr2 108174771 108174795 -142513059 + (CCA)n Simple_repeat Simple_repeat 1 24 0 2341 271 92 23 chr2 108174795 108175077 -142512777 + L1MEc LINE L1 2121 2382 -3833 789 121 8 0 chr2 108175077 108175201 -142512653 + L1PB1 LINE L1 6026 6150 -1 2341 271 92 23 chr2 108175201 108176617 -142511237 + L1MEc LINE L1 2382 3954 -2261 1561 208 0 31 chr2 108176815 108177133 -142510721 - AluJo SINE Alu -4 308 1 187 374 97 35 chr2 108179878 108180135 -142507719 - L2 LINE L2 -1 3271 2999 2007 143 7 7 chr2 108180162 108180456 -142507398 + AluSx SINE Alu 3 296 -16 183 80 0 0 chr2 108180953 108180978 -142506876 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 937 177 6 0 chr2 108180979 108181137 -142506717 - FAM SINE Alu -21 164 6 24 32 0 0 chr2 108182407 108182438 -142505416 + AT_rich Low_complexity Low_complexity 1 31 0 342 225 0 28 chr2 108182469 108182540 -142505314 + Tigger2 DNA MER2_type 1 69 -2649 * 2560 161 28 5 chr2 108182530 108182966 -142504888 + Tigger2 DNA MER2_type 2273 2718 0 262 330 54 49 chr2 108182981 108183166 -142504688 - MIR SINE MIR -57 205 20 365 219 35 26 chr2 108184388 108184502 -142503352 + L1MEd LINE L1 895 1009 -5110 209 227 62 136 chr2 108184805 108184981 -142502873 - MER5B DNA MER1_type -9 169 7 242 200 19 19 chr2 108186210 108186315 -142501539 + CT-rich Low_complexity Low_complexity 2 106 0 367 285 65 8 chr2 108186723 108186846 -142501008 - MER94 DNA DNA 0 134 5 22 0 0 0 chr2 108187475 108187497 -142500357 + AT_rich Low_complexity Low_complexity 1 22 0 610 204 234 30 chr2 108188813 108189082 -142498772 + MER5C DNA MER1_type 1 324 0 331 299 52 41 chr2 108190234 108190428 -142497426 - L2 LINE L2 0 3313 3118 276 260 13 52 chr2 108190583 108190660 -142497194 + MER5B DNA MER1_type 46 111 -67 1330 109 0 0 chr2 108190660 108190834 -142497020 + AluSg/x SINE Alu 126 299 -13 258 297 0 0 chr2 108191710 108191774 -142496080 + L2 LINE L2 2986 3049 -223 346 274 94 134 chr2 108192209 108192633 -142495221 - L2 LINE L2 -21 3251 2845 255 302 84 71 chr2 108192644 108193025 -142494829 - L2 LINE L2 -576 2738 2353 23 54 0 0 chr2 108193574 108193611 -142494243 + AT_rich Low_complexity Low_complexity 1 37 0 1417 213 58 22 chr2 108194303 108194664 -142493190 - MLT1A2 LTR MaLR 0 374 1 1235 143 4 29 chr2 108195538 108195766 -142492088 + L1MA7 LINE L1 6052 6275 -16 1528 103 175 103 chr2 108195766 108196115 -142491739 - THE1C LTR MaLR 0 375 2 1235 143 4 29 chr2 108196115 108196131 -142491723 + L1MA7 LINE L1 6275 6290 -1 706 286 132 36 chr2 108196149 108196733 -142491121 - L1MC4 LINE L1 -40 8002 7363 190 245 0 20 chr2 108197175 108197224 -142490630 + MIR SINE MIR 128 175 -87 1935 230 67 5 chr2 108199653 108200074 -142487780 - MLT2B1 LTR ERVL -73 447 1 10857 175 42 10 chr2 108200074 108200942 -142486912 - ERVL-B1 LTR ERVL -7 5757 4918 1595 212 19 56 chr2 108200942 108201353 -142486501 - MSTD LTR MaLR 0 396 1 10857 175 42 10 chr2 108201353 108201762 -142486092 - ERVL-B1 LTR ERVL -846 4918 4523 2793 93 0 0 chr2 108201762 108202126 -142485728 + THE1B LTR MaLR 1 364 0 10857 175 42 10 chr2 108202126 108202859 -142484995 - ERVL-B1 LTR ERVL -1241 4523 3682 297 390 61 0 chr2 108202899 108203063 -142484791 + MLT1K LTR MaLR 184 357 -231 527 285 107 69 chr2 108203240 108203420 -142484434 + HAL1 LINE L1 1390 1562 -945 1963 154 0 0 chr2 108203420 108203712 -142484142 + AluSx SINE Alu 3 294 -18 527 285 107 69 chr2 108203712 108204026 -142483828 + HAL1 LINE L1 1562 1903 -604 1328 89 0 0 chr2 108204604 108204772 -142483082 + AluSg/x SINE Alu 141 308 -4 348 218 30 0 chr2 108204900 108205001 -142482853 + HAL1 LINE L1 2282 2385 -122 372 214 0 71 chr2 108205108 108205192 -142482662 + AluJo SINE Alu 114 191 -111 263 217 0 0 chr2 108205173 108205219 -142482635 + FLAM SINE Alu 70 115 -18 * 216 0 0 0 chr2 108205755 108205779 -142482075 + (TG)n Simple_repeat Simple_repeat 1 24 0 466 135 0 0 chr2 108206331 108206405 -142481449 + MADE1 DNA Mariner 6 79 -1 312 325 65 26 chr2 108206677 108206831 -142481023 - L3 LINE CR1 -1093 484 325 1049 16 0 0 chr2 108207886 108208007 -142479847 + L1PA2 LINE L1 6033 6153 -2 21 0 0 0 chr2 108208196 108208217 -142479637 + AT_rich Low_complexity Low_complexity 1 21 0 2057 123 0 0 chr2 108208341 108208656 -142479198 - AluSx SINE Alu 0 315 1 311 296 8 64 chr2 108208962 108209087 -142478767 - MER103 DNA DNA -48 118 1 25 31 0 0 chr2 108210232 108210264 -142477590 + AT_rich Low_complexity Low_complexity 1 32 0 1418 52 0 0 chr2 108210277 108210450 -142477404 - L1P3 LINE L1 -407 5747 5575 264 53 0 0 chr2 108210449 108210487 -142477367 + L1PA7 LINE L1 6117 6154 0 * 524 238 33 0 chr2 108210484 108210606 -142477248 - L1MB7 LINE L1 -43 6141 6016 * 1723 246 76 31 chr2 108210605 108211557 -142476297 - L1M4 LINE L1 -3839 2543 1542 34 72 0 0 chr2 108212319 108212388 -142475466 + AT_rich Low_complexity Low_complexity 1 69 0 289 191 36 42 chr2 108212392 108212560 -142475294 + (TTATA)n Simple_repeat Simple_repeat 1 167 0 * 318 132 19 75 chr2 108212438 108212597 -142475257 + (TAA)n Simple_repeat Simple_repeat 1 150 0 1000 198 163 92 chr2 108212817 108213185 -142474669 + MSTD LTR MaLR 1 394 -2 3612 246 113 84 chr2 108213193 108214809 -142473045 + MSTD-int LTR MaLR 15 1730 -5 1092 279 133 0 chr2 108214816 108215163 -142472691 + MSTD LTR MaLR 3 395 -1 376 245 77 14 chr2 108216436 108216579 -142471275 - LTR41 LTR ERVL -600 173 22 542 207 0 58 chr2 108216588 108216709 -142471145 - AluJo SINE Alu -124 188 75 236 317 49 0 chr2 108216736 108216818 -142471036 - MIR SINE MIR -113 149 64 1605 196 3 34 chr2 108218575 108218897 -142468957 + AluJo SINE Alu 1 312 0 512 42 0 28 chr2 108220220 108220292 -142467562 + (GGAA)n Simple_repeat Simple_repeat 4 73 0 25 31 0 0 chr2 108220735 108220767 -142467087 + AT_rich Low_complexity Low_complexity 1 32 0 1664 286 62 43 chr2 108220898 108221507 -142466347 + L1MCb LINE L1 3 632 -5413 2223 134 111 3 chr2 108221507 108221896 -142465958 - MSTB1 LTR MaLR -1 431 1 1664 286 62 43 chr2 108221896 108222061 -142465793 + L1MCb LINE L1 632 792 -5253 2225 76 31 10 chr2 108222063 108222354 -142465500 + AluY SINE Alu 1 297 -14 2476 268 30 50 chr2 108222416 108223747 -142464107 + L1MCb LINE L1 2220 3665 -2899 294 29 0 0 chr2 108223747 108223782 -142464072 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 2476 268 30 50 chr2 108223782 108223962 -142463892 + L1MCb LINE L1 3665 3847 -2717 21 100 0 0 chr2 108224016 108224086 -142463768 + AT_rich Low_complexity Low_complexity 1 70 0 3620 103 17 24 chr2 108224172 108224705 -142463149 - MER1A DNA MER1_type 0 529 1 1095 249 27 14 chr2 108224714 108225079 -142462775 + L1MCb LINE L1 4010 4379 -2185 262 171 0 0 chr2 108225086 108225127 -142462727 + Alu SINE Alu 5 45 -256 2077 137 0 37 chr2 108225985 108226307 -142461547 - AluSx SINE Alu 0 312 3 22 56 0 0 chr2 108227765 108227801 -142460053 + AT_rich Low_complexity Low_complexity 1 36 0 1022 261 114 36 chr2 108228983 108230078 -142457776 - L1ME3A LINE L1 0 6170 4957 865 152 55 6 chr2 108230087 108230252 -142457602 - L1MC2 LINE L1 0 6344 6172 1951 292 30 0 chr2 108230473 108230980 -142456874 + L1PA13 LINE L1 53 574 -6265 2870 227 6 0 chr2 108231022 108231668 -142456186 + L1PA13 LINE L1 2314 2963 -3886 7340 155 9 9 chr2 108231672 108232941 -142454913 - Tigger1 DNA MER2_type -98 2320 1052 2508 64 0 0 chr2 108233176 108233474 -142454380 - AluY SINE Alu -13 298 1 288 380 25 8 chr2 108234269 108234390 -142453464 - MIR3 SINE MIR -84 124 2 357 301 12 38 chr2 108235742 108235909 -142451945 + MER21B LTR ERV1 1 201 -404 * 1192 286 85 16 chr2 108235878 108236490 -142451364 + MER21B LTR ERV1 98 800 -63 204 218 90 113 chr2 108237401 108237534 -142450320 + L2 LINE L2 2955 3084 -188 693 193 0 7 chr2 108237769 108237904 -142449950 - FRAM SINE Alu -9 167 34 2152 126 7 0 chr2 108238420 108238730 -142449124 + AluSq SINE Alu 1 312 -1 1631 338 134 36 chr2 108238757 108240325 -142447529 + L2 LINE L2 1417 3133 -180 2148 110 20 3 chr2 108240718 108241017 -142446837 + AluSx SINE Alu 1 304 -8 318 286 76 25 chr2 108242975 108243094 -142444760 + L2 LINE L2 3181 3305 -8 1113 219 9 9 chr2 108243130 108243363 -142444491 + AluJo SINE Alu 1 233 -79 3883 110 18 180 chr2 108243367 108244874 -142442980 - pTR5 LTR ERV1 -4 2602 1524 204 97 0 0 chr2 108245178 108245209 -142442645 + (CA)n Simple_repeat Simple_repeat 2 32 0 1524 302 227 12 chr2 108245223 108246203 -142441651 - L2 LINE L2 -189 3124 1924 243 309 0 0 chr2 108246237 108246318 -142441536 - L1MC4 LINE L1 -60 7982 7902 3392 242 84 19 chr2 108246336 108247416 -142440438 - L1MC4 LINE L1 -120 7922 6773 517 234 152 22 chr2 108247417 108247686 -142440168 - L1MEc LINE L1 -765 5450 5147 3074 257 50 44 chr2 108247711 108248740 -142439114 + L1M4 LINE L1 2 1037 -5505 223 127 18 55 chr2 108248743 108248798 -142439056 + (TTATA)n Simple_repeat Simple_repeat 5 57 0 7532 238 83 56 chr2 108248802 108249234 -142438620 + L1M4 LINE L1 1032 1451 -5193 306 81 0 0 chr2 108249234 108249271 -142438583 - tRNA-Lys-AAG tRNA tRNA -39 37 1 7532 238 83 56 chr2 108249271 108249733 -142438121 + L1M4 LINE L1 1451 1899 -4745 2160 120 10 3 chr2 108249733 108250033 -142437821 + AluSx SINE Alu 1 302 -10 7532 238 83 56 chr2 108250033 108250584 -142437270 + L1M4 LINE L1 1899 2434 -4210 2082 134 10 0 chr2 108250584 108250883 -142436971 + AluSp SINE Alu 1 302 -11 7532 238 83 56 chr2 108250883 108252788 -142435066 + L1M4 LINE L1 2434 4581 -2063 1823 82 68 11 chr2 108252788 108253068 -142434786 + L1PA13 LINE L1 5864 6159 -4 7532 238 83 56 chr2 108253068 108254159 -142433695 + L1M4 LINE L1 4581 5642 -1002 23 0 0 0 chr2 108254159 108254182 -142433672 + AT_rich Low_complexity Low_complexity 1 23 0 2244 95 0 10 chr2 108254204 108254499 -142433355 - AluSc SINE Alu -15 294 3 1493 253 66 17 chr2 108254803 108255391 -142432463 - L1MEc LINE L1 -1163 5052 4436 291 160 64 0 chr2 108255416 108255510 -142432344 + (TA)n Simple_repeat Simple_repeat 1 100 0 1008 264 63 92 chr2 108255669 108256062 -142431792 - L1MEc LINE L1 -2703 3512 3109 269 133 0 0 chr2 108256062 108256107 -142431747 - MADE1 DNA Mariner -34 46 2 1008 264 63 92 chr2 108256107 108256735 -142431119 - L1MEc LINE L1 -3106 3109 2478 316 242 30 0 chr2 108256919 108257018 -142430836 - L1MEc LINE L1 -4309 2087 1986 2209 102 0 3 chr2 108257181 108257474 -142430380 - AluSg SINE Alu -16 294 3 1332 285 58 37 chr2 108257485 108258277 -142429577 - L1MEc LINE L1 -4522 1874 1066 270 176 26 43 chr2 108258309 108258719 -142429135 + (TA)n Simple_repeat Simple_repeat 1 403 0 1011 267 179 67 chr2 108258723 108259634 -142428220 - L1MEc LINE L1 -5335 1061 49 1582 163 25 0 chr2 108260258 108260503 -142427351 + AluSc SINE Alu 1 251 -58 1842 165 95 14 chr2 108260503 108260873 -142426981 + MSTB1 LTR MaLR 30 429 -3 927 240 106 12 chr2 108260874 108261195 -142426659 - L1M4 LINE L1 -1761 4385 4035 1066 216 39 48 chr2 108261195 108261354 -142426500 - L1MDb LINE L1 -4895 1645 1486 1783 131 94 28 chr2 108261354 108261706 -142426148 + THE1C LTR MaLR 1 375 0 1066 216 39 48 chr2 108261706 108262093 -142425761 - L1MDb LINE L1 -5054 1486 1186 2177 119 0 10 chr2 108262093 108262396 -142425458 + AluY SINE Alu 1 300 -11 1310 208 0 25 chr2 108262419 108262655 -142425199 + Tigger7 DNA MER2_type 2 231 -2256 510 198 21 0 chr2 108262674 108262770 -142425084 + Tigger7 DNA MER2_type 2489 2586 -1 405 214 71 0 chr2 108262772 108262870 -142424984 - L1MDb LINE L1 -5366 1177 1073 1953 63 0 0 chr2 108263309 108263547 -142424307 - AluY SINE Alu -10 301 64 828 271 83 37 chr2 108263793 108264203 -142423651 - L1MDb LINE L1 -6078 462 34 801 162 0 0 chr2 108264250 108264398 -142423456 - L1MA4 LINE L1 -7 6293 6146 807 117 0 0 chr2 108264398 108264518 -142423336 + L1MA4 LINE L1 6047 6166 -134 215 375 23 0 chr2 108266386 108266474 -142421380 + MIR SINE MIR 59 148 -114 299 248 46 142 chr2 108266744 108266962 -142420892 - MIR SINE MIR -13 249 53 182 250 79 105 chr2 108267090 108267166 -142420688 - L2 LINE L2 -1 3312 3239 1390 238 25 20 chr2 108268087 108268440 -142419414 - MER4D LTR ERV1 0 903 549 1584 180 10 24 chr2 108268470 108268759 -142419095 - MER49 LTR ERV1 -638 285 1 206 235 25 34 chr2 108269551 108269670 -142418184 + GA-rich Low_complexity Low_complexity 4 121 0 450 263 0 72 chr2 108269683 108269877 -142417977 + GA-rich Low_complexity Low_complexity 1 180 0 747 296 86 10 chr2 108270397 108270701 -142417153 - MER46C DNA MER2_type -11 327 1 634 296 46 11 chr2 108270721 108270981 -142416873 - L1MC/D LINE L1 -2030 5778 5510 1300 227 164 8 chr2 108270997 108271393 -142416461 - MLT1C LTR MaLR -9 458 1 649 241 118 94 chr2 108271513 108271955 -142415899 - L1MD2 LINE L1 -13 6346 5887 2289 117 0 3 chr2 108271955 108272263 -142415591 - AluSx SINE Alu -5 307 1 649 241 118 94 chr2 108272263 108272360 -142415494 - L1MD2 LINE L1 -472 5887 5794 470 339 79 6 chr2 108273564 108273781 -142414073 + MIR SINE MIR 5 235 -27 278 225 28 106 chr2 108274508 108274650 -142413204 + MLT1K LTR MaLR 373 503 -85 395 313 138 23 chr2 108275088 108275305 -142412549 + MIR SINE MIR 18 259 -3 22 35 0 0 chr2 108275366 108275395 -142412459 + AT_rich Low_complexity Low_complexity 1 29 0 501 292 31 26 chr2 108275468 108275660 -142412194 + MIR SINE MIR 5 197 -65 746 253 131 13 chr2 108276874 108277103 -142410751 + MIR SINE MIR 7 262 0 198 103 0 0 chr2 108278506 108278535 -142409319 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 4980 80 5 8 chr2 108279138 108279364 -142408490 + PABL_A LTR ERV1 1 226 -434 2167 109 17 0 chr2 108279364 108279657 -142408197 + AluY SINE Alu 1 298 -13 4980 80 5 8 chr2 108279657 108280090 -142407764 + PABL_A LTR ERV1 226 658 -2 200 128 0 26 chr2 108280390 108280429 -142407425 + (AAATG)n Simple_repeat Simple_repeat 3 40 0 3033 214 33 47 chr2 108281229 108283103 -142404751 - L1MC2 LINE L1 -91 6253 4305 2298 100 3 7 chr2 108283519 108283828 -142404026 - AluSc SINE Alu -1 308 1 180 0 0 0 chr2 108287121 108287141 -142400713 + (CAGCC)n Simple_repeat Simple_repeat 1 20 0 260 259 295 0 chr2 108287901 108288013 -142399841 - MIR SINE MIR -41 221 77 2321 85 7 0 chr2 108288015 108288308 -142399546 + AluSc SINE Alu 4 298 -11 2250 97 17 7 chr2 108288308 108288607 -142399247 + AluY SINE Alu 1 302 -9 877 273 74 55 chr2 108288637 108289004 -142398850 - MLT1H LTR MaLR -109 440 67 306 265 40 16 chr2 108289241 108289385 -142398469 - L1ME2 LINE L1 -8 6154 6007 2796 152 2 4 chr2 108289392 108289853 -142398001 + MER66B LTR ERV1 27 486 0 779 176 65 86 chr2 108289879 108289954 -142397900 - L1ME2 LINE L1 -175 5989 5914 4075 154 33 31 chr2 108289954 108290737 -142397117 - LTR1 LTR ERV1 0 785 1 779 176 65 86 chr2 108290737 108290939 -142396915 - L1ME2 LINE L1 -250 5914 5718 344 260 19 0 chr2 108290939 108290962 -142396892 - L1MA10 LINE L1 -33 6301 6279 434 217 64 109 chr2 108290962 108291059 -142396795 - L1ME1 LINE L1 -49 6186 6086 1829 187 0 16 chr2 108291059 108291375 -142396479 - AluJo SINE Alu -1 311 1 434 217 64 109 chr2 108291375 108291544 -142396310 - L1ME1 LINE L1 -149 6086 5932 1506 260 121 17 chr2 108291651 108292883 -142394971 - L1ME1 LINE L1 -357 5878 4776 262 45 45 0 chr2 108292883 108292927 -142394927 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1506 260 121 17 chr2 108292927 108294690 -142393164 - L1ME1 LINE L1 -1459 4776 2604 812 272 50 20 chr2 108294696 108295137 -142392717 - L1ME1 LINE L1 -4590 1806 1353 1149 188 30 32 chr2 108295146 108295469 -142392385 - MLT1A1 LTR MaLR 0 365 1 1745 289 95 39 chr2 108295475 108296700 -142391154 - L1ME1 LINE L1 -5056 1340 48 1413 259 98 35 chr2 108296730 108297947 -142389907 - L1ME2 LINE L1 -589 5575 4329 2112 150 0 0 chr2 108298568 108298875 -142388979 - AluSx SINE Alu -5 307 1 673 300 46 17 chr2 108298948 108299185 -142388669 - MIR SINE MIR 0 262 19 4062 129 28 0 chr2 108299455 108300096 -142387758 - L1PA16 LINE L1 -14 6152 5494 1759 243 28 32 chr2 108300275 108300807 -142387047 - MER99 DNA DNA -1 827 298 21 36 0 0 chr2 108301158 108301186 -142386668 + AT_rich Low_complexity Low_complexity 1 28 0 5382 217 11 3 chr2 108301447 108302263 -142385591 + L1PA16 LINE L1 4037 4845 -1321 2305 111 3 0 chr2 108302263 108302569 -142385285 - AluSq SINE Alu -6 307 1 5382 217 11 3 chr2 108302569 108303865 -142383989 + L1PA16 LINE L1 4845 6165 -1 28 0 0 0 chr2 108303865 108303893 -142383961 + AT_rich Low_complexity Low_complexity 1 28 0 3310 139 70 22 chr2 108304120 108304704 -142383150 - LTR9 LTR ERV1 0 612 1 243 363 86 31 chr2 108304970 108305262 -142382592 - L2 LINE L2 -1295 2019 1712 351 281 136 20 chr2 108305413 108305612 -142382242 - L1MC/D LINE L1 -2331 5477 5256 402 316 33 78 chr2 108305859 108306191 -142381663 - HAL1 LINE L1 -1131 1376 1060 259 259 25 0 chr2 108306236 108306317 -142381537 + CT-rich Low_complexity Low_complexity 2 84 0 342 0 0 0 chr2 108307001 108307039 -142380815 + (GA)n Simple_repeat Simple_repeat 2 39 0 389 158 8 47 chr2 108307554 108307681 -142380173 + (TA)n Simple_repeat Simple_repeat 1 122 0 2506 79 0 0 chr2 108308876 108309181 -142378673 - AluY SINE Alu -6 305 1 1379 285 79 15 chr2 108309419 108310029 -142377825 + L2 LINE L2 1776 2424 -890 4658 123 56 48 chr2 108310190 108311621 -142376233 - pTR5 LTR ERV1 0 2606 1524 842 158 0 13 chr2 108311621 108311773 -142376081 + MER6A DNA MER2_type 84 233 -372 1502 193 17 51 chr2 108312343 108312422 -142375432 - MER6 DNA MER2_type 0 865 785 1766 156 63 4 chr2 108312422 108312722 -142375132 + AluSx SINE Alu 1 316 0 1502 193 17 51 chr2 108312722 108312992 -142374862 - MER6 DNA MER2_type -80 785 266 1938 63 59 37 chr2 108313257 108313577 -142374277 + AluY SINE Alu 6 331 0 222 273 99 83 chr2 108313940 108314061 -142373793 - L3b LINE CR1 -19 1564 1442 25 65 0 0 chr2 108314494 108314540 -142373314 + AT_rich Low_complexity Low_complexity 1 46 0 4052 198 30 40 chr2 108315789 108316686 -142371168 - MER54A LTR ERVL 0 901 14 219 186 0 0 chr2 108316686 108316729 -142371125 + (TA)n Simple_repeat Simple_repeat 1 43 0 416 323 7 19 chr2 108316826 108316981 -142370873 + L2 LINE L2 3159 3311 -2 1911 203 30 32 chr2 108317317 108317784 -142370070 - MER70A LTR ERVL -3 469 4 273 326 70 49 chr2 108317879 108318164 -142369690 + L1ME3A LINE L1 314 604 -5601 514 206 0 0 chr2 108318523 108318615 -142369239 + FLAM_A SINE Alu 1 92 -50 256 122 27 67 chr2 108318615 108318839 -142369015 + AluSx SINE Alu 14 299 -1 650 244 58 29 chr2 108318848 108319053 -142368801 + AluJo SINE Alu 84 294 -18 337 291 207 46 chr2 108320260 108320545 -142367309 + L1ME3A LINE L1 1002 1332 -4873 268 311 49 0 chr2 108320702 108320824 -142367030 + L1ME3A LINE L1 1547 1674 -4722 399 253 263 21 chr2 108320952 108321146 -142366708 - MIR SINE MIR -16 246 6 428 298 68 28 chr2 108321325 108321577 -142366277 + L1ME3A LINE L1 2049 2310 -4086 294 317 77 20 chr2 108321598 108321898 -142365956 + L1ME3A LINE L1 2323 2639 -3576 22 70 0 0 chr2 108322231 108322274 -142365580 + AT_rich Low_complexity Low_complexity 1 43 0 380 280 50 44 chr2 108322596 108322778 -142365076 + L1ME3A LINE L1 5067 5249 -966 297 285 104 16 chr2 108322796 108322989 -142364865 + L1ME3A LINE L1 5796 6005 -234 256 212 31 2 chr2 108323620 108323698 -142364156 + MLT1H LTR MaLR 466 534 -15 2382 244 73 18 chr2 108324122 108324207 -142363647 + L1ME LINE L1 4285 4364 -1802 2287 114 0 0 chr2 108324207 108324506 -142363348 + AluSx SINE Alu 1 299 -13 2382 244 73 18 chr2 108324506 108325855 -142361999 + L1ME LINE L1 4364 5789 -377 297 279 0 13 chr2 108325887 108325966 -142361888 + MER63 DNA MER1_type 983 1060 0 346 250 85 38 chr2 108326126 108326338 -142361516 - MLT1L LTR MaLR -2 613 392 186 103 0 0 chr2 108327066 108327095 -142360759 + (TG)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr2 108327095 108327116 -142360738 + AT_rich Low_complexity Low_complexity 1 21 0 258 81 0 0 chr2 108328864 108328901 -142358953 + (CA)n Simple_repeat Simple_repeat 1 37 0 2476 198 67 0 chr2 108329276 108329847 -142358007 + L1MC3 LINE L1 5425 6033 -1752 204 40 0 0 chr2 108329861 108329886 -142357968 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1124 191 21 0 chr2 108329900 108330135 -142357719 - L1MC3 LINE L1 -24 7761 7522 1715 174 6 7 chr2 108330135 108330543 -142357311 + L1MC3 LINE L1 7232 7942 -53 192 77 0 0 chr2 108330704 108330730 -142357124 + (TAGA)n Simple_repeat Simple_repeat 1 26 0 1027 143 6 6 chr2 108330785 108330946 -142356908 + AluSx SINE Alu 1 161 -151 1296 158 4 12 chr2 108331259 108331505 -142356349 + LTR4 LTR ERV1 351 594 -2 1020 122 0 0 chr2 108331505 108331653 -142356201 + AluSx SINE Alu 153 300 -10 273 266 202 9 chr2 108332312 108332421 -142355433 + L2 LINE L2 3138 3267 -5 1859 173 0 13 chr2 108332575 108332875 -142354979 + AluSx SINE Alu 1 296 -16 214 316 13 26 chr2 108333266 108333342 -142354512 - MER5A DNA MER1_type -27 162 88 2012 159 116 0 chr2 108333928 108334306 -142353548 + MSTB LTR MaLR 5 426 0 2893 191 62 14 chr2 108334534 108335116 -142352738 + LTR9 LTR ERV1 3 612 0 250 319 36 29 chr2 108335447 108335585 -142352269 - MER5A DNA MER1_type -1 188 50 1898 168 0 0 chr2 108336478 108336769 -142351085 + AluSx SINE Alu 1 291 -21 329 228 54 11 chr2 108337293 108337385 -142350469 - MER91B DNA MER1_type -5 185 90 244 324 46 19 chr2 108338200 108338308 -142349546 - MER81 DNA DNA -1 113 3 32 26 0 0 chr2 108339581 108339620 -142348234 + AT_rich Low_complexity Low_complexity 1 39 0 313 246 0 88 chr2 108339649 108339763 -142348091 - L1ME4a LINE L1 -52 6069 5966 383 147 40 7 chr2 108340242 108340392 -142347462 + (TA)n Simple_repeat Simple_repeat 2 156 0 1526 199 0 51 chr2 108340404 108340715 -142347139 - AluJo SINE Alu -17 295 1 194 321 86 53 chr2 108340981 108341032 -142346822 - L2 LINE L2 -520 2794 2746 2213 89 10 20 chr2 108341032 108341334 -142346520 + AluSc SINE Alu 1 299 -10 194 321 86 53 chr2 108341334 108341491 -142346363 - L2 LINE L2 -568 2746 2579 380 333 166 22 chr2 108341697 108342160 -142345694 - L2 LINE L2 -1031 2283 1754 180 0 0 0 chr2 108342755 108342775 -142345079 + (TA)n Simple_repeat Simple_repeat 2 21 0 32 86 0 0 chr2 108345019 108345100 -142342754 + AT_rich Low_complexity Low_complexity 1 81 0 1023 244 178 97 chr2 108345517 108346229 -142341625 - MER21B LTR ERV1 -77 786 17 7653 80 4 9 chr2 108347710 108348722 -142339132 + LTR13 LTR ERVK 1 1007 0 321 221 0 0 chr2 108348847 108348915 -142338939 - MER116 DNA Mariner -5 75 8 1250 92 0 0 chr2 108349301 108349474 -142338380 - AluYa5 SINE Alu -14 297 125 2483 58 0 0 chr2 108349481 108349776 -142338078 - AluY SINE Alu -16 295 1 189 0 0 0 chr2 108349779 108349800 -142338054 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 286 266 13 13 chr2 108350444 108350523 -142337331 + MIR SINE MIR 83 161 -101 4800 118 39 19 chr2 108350542 108351312 -142336542 + LTR1 LTR ERV1 1 785 0 205 211 0 0 chr2 108351361 108351399 -142336455 + (TTA)n Simple_repeat Simple_repeat 1 38 0 571 201 73 22 chr2 108352756 108352935 -142334919 + MER53 DNA DNA 1 188 -1 218 263 221 11 chr2 108355138 108355233 -142332621 + L2 LINE L2 3158 3272 0 472 292 43 12 chr2 108355424 108355585 -142332269 - MIR SINE MIR -37 225 60 1458 208 3 32 chr2 108406604 108406912 -142280942 + MER50 LTR ERV1 412 710 -24 1435 200 35 3 chr2 108406948 108407233 -142280621 + L1MC2 LINE L1 5581 5874 -470 229 254 45 15 chr2 108407323 108407390 -142280464 + L2 LINE L2 3245 3313 0 702 275 121 38 chr2 108408443 108408756 -142279098 - L2 LINE L2 -514 2800 2462 1897 164 71 30 chr2 108409029 108409563 -142278291 - MLT2A1 LTR ERVL 0 554 1 2633 102 42 11 chr2 108410239 108410592 -142277262 - THE1B LTR MaLR 0 364 1 311 269 43 57 chr2 108410596 108410737 -142277117 - MIR SINE MIR -109 153 15 35 29 0 44 chr2 108411297 108411326 -142276528 + AT_rich Low_complexity Low_complexity 1 30 -35 7765 42 1 3 chr2 108411326 108412296 -142275558 + L1PA5 LINE L1 5176 6143 -11 35 29 0 44 chr2 108412296 108412334 -142275520 + AT_rich Low_complexity Low_complexity 30 65 0 232 309 110 52 chr2 108412415 108412778 -142275076 + L2 LINE L2 2007 2390 -924 253 359 158 30 chr2 108412892 108413157 -142274697 + L2 LINE L2 2971 3269 -3 2493 51 3 19 chr2 108415038 108415349 -142272505 + AluY SINE Alu 1 306 -5 266 330 0 22 chr2 108416207 108416298 -142271556 + L2 LINE L2 3141 3229 -43 25 51 0 0 chr2 108417844 108417883 -142269971 + AT_rich Low_complexity Low_complexity 1 39 0 2117 112 3 20 chr2 108417969 108418272 -142269582 - L1PA10 LINE L1 0 6168 5871 3647 97 26 2 chr2 108418272 108418780 -142269074 + L1PA10 LINE L1 5369 5888 -280 412 273 11 102 chr2 108419092 108419279 -142268575 - MER5B DNA MER1_type -3 175 6 367 291 17 8 chr2 108419320 108419437 -142268417 + L2 LINE L2 3196 3313 0 249 256 128 0 chr2 108420467 108420553 -142267301 - MER5A DNA MER1_type -84 105 9 2258 82 7 16 chr2 108421764 108422067 -142265787 + AluY SINE Alu 1 300 -11 1698 172 33 13 chr2 108422318 108422503 -142265351 - AluJb SINE Alu -3 309 114 183 42 0 0 chr2 108422503 108422527 -142265327 + (TTTTG)n Simple_repeat Simple_repeat 5 28 0 1698 172 33 13 chr2 108422527 108422644 -142265210 - AluJb SINE Alu -198 114 1 2434 84 0 0 chr2 108423118 108423417 -142264437 + AluSg SINE Alu 2 300 -10 1828 145 0 43 chr2 108424227 108424530 -142263324 - AluSx SINE Alu -18 294 5 201 74 0 0 chr2 108424535 108424562 -142263292 + (TG)n Simple_repeat Simple_repeat 2 28 0 379 115 0 48 chr2 108424562 108424666 -142263188 + (TA)n Simple_repeat Simple_repeat 1 99 0 559 257 64 37 chr2 108425205 108425695 -142262159 - L1M4b LINE L1 -3867 3090 2619 1552 257 60 77 chr2 108425957 108426973 -142260881 - L1M4b LINE L1 -4606 2353 1355 758 254 54 40 chr2 108427010 108427236 -142260618 - L1M4b LINE L1 -5609 1250 980 1321 243 7 17 chr2 108427236 108427537 -142260317 - AluJo SINE Alu -14 298 1 758 254 54 40 chr2 108427537 108427657 -142260197 - L1M4b LINE L1 -5879 980 863 2318 132 87 0 chr2 108427671 108428086 -142259768 + MER1A DNA MER1_type 34 525 -4 1798 298 60 48 chr2 108428125 108428606 -142259248 - L1M4b LINE L1 -6026 833 336 5644 65 0 59 chr2 108428606 108429424 -142258430 + L1PA8 LINE L1 5398 6167 -5 1798 298 60 48 chr2 108429424 108429753 -142258101 - L1M4b LINE L1 -6523 336 13 336 83 0 0 chr2 108430427 108430475 -142257379 + (A)n Simple_repeat Simple_repeat 1 48 0 429 20 0 0 chr2 108431036 108431086 -142256768 + (A)n Simple_repeat Simple_repeat 1 50 0 412 206 60 0 chr2 108432361 108432461 -142255393 + MLT2D LTR ERVL 1 105 -292 288 143 0 95 chr2 108432489 108432552 -142255302 + MLT2D LTR ERVL 341 414 0 877 95 42 113 chr2 108432930 108433098 -142254756 + MER51B LTR ERV1 1 156 -221 * 1667 177 27 0 chr2 108433075 108433374 -142254480 + MER51B LTR ERV1 71 377 0 569 172 7 0 chr2 108433420 108433525 -142254329 + MER63 DNA MER1_type 683 1644 -44 494 209 46 73 chr2 108435595 108435940 -142251914 + LTR54 LTR ERV1 62 478 -32 1783 180 59 5 chr2 108435943 108436348 -142251506 + MER57B LTR ERV1 8 434 0 434 157 176 0 chr2 108436638 108436746 -142251108 - LTR37A LTR ERV1 0 426 300 2180 204 39 39 chr2 108436830 108437403 -142250451 - MER34B LTR ERV1 0 565 11 229 259 2 112 chr2 108437425 108437567 -142250287 + MIR SINE MIR 32 161 -47 363 23 0 0 chr2 108437650 108437694 -142250160 + (TG)n Simple_repeat Simple_repeat 1 44 0 1826 247 176 39 chr2 108438191 108439253 -142248601 - MER69B DNA AcHobo -18 1208 1 1188 241 35 35 chr2 108439464 108439866 -142247988 + L1ME1 LINE L1 5760 6161 -5 801 301 68 24 chr2 108439890 108440229 -142247625 + HERV16 LTR ERVL 821 1174 -3822 2237 137 19 13 chr2 108440493 108440866 -142246988 + THE1C LTR MaLR 1 375 0 444 62 0 0 chr2 108441016 108441080 -142246774 + (TC)n Simple_repeat Simple_repeat 1 64 0 279 0 0 0 chr2 108441080 108441111 -142246743 + (TG)n Simple_repeat Simple_repeat 2 32 0 1862 182 3 0 chr2 108441298 108441606 -142246248 + AluJb SINE Alu 1 309 -3 370 271 193 0 chr2 108441778 108441918 -142245936 + LTR16A1 LTR ERVL 278 444 -13 923 169 0 0 chr2 108442202 108442356 -142245498 + MER41A LTR ERV1 401 554 0 4258 128 46 19 chr2 108442356 108443028 -142244826 + MER41A-int LTR ERV1 1 690 -5256 1503 93 49 0 chr2 108443029 108443234 -142244620 + MER41A-int LTR ERV1 1392 1606 -4340 1095 127 0 6 chr2 108443223 108443396 -142244458 + MER41A-int LTR ERV1 1846 2017 -3929 * 4706 118 38 29 chr2 108443392 108444165 -142243689 + MER41A-int LTR ERV1 2167 2946 -3000 * 8070 129 45 22 chr2 108444152 108445608 -142242246 + MER41A-int LTR ERV1 2856 4345 -670 2324 107 9 0 chr2 108445708 108446035 -142241819 + MER41B-int LTR ERV1 5617 5946 0 3619 117 26 0 chr2 108446035 108446572 -142241282 + MER41B LTR ERV1 1 551 -84 299 279 37 7 chr2 108446979 108447115 -142240739 + L1ME LINE L1 5714 5853 -268 22 70 0 0 chr2 108447143 108447186 -142240668 + AT_rich Low_complexity Low_complexity 1 43 0 288 159 0 0 chr2 108447937 108447981 -142239873 + MLT2C1 LTR ERVL 44 87 -310 * 1166 243 27 104 chr2 108447973 108448310 -142239544 + MLT1E2 LTR MaLR 75 348 -278 2081 132 3 0 chr2 108448310 108448605 -142239249 + AluSx SINE Alu 1 296 -16 1166 243 27 104 chr2 108448605 108448865 -142238989 + MLT1E2 LTR MaLR 348 626 0 1006 280 66 2 chr2 108448865 108449320 -142238534 + MLT1E2-int LTR MaLR 1 606 -765 1042 200 4 47 chr2 108449711 108449966 -142237888 - AluJo SINE Alu -68 244 1 1275 244 101 26 chr2 108450077 108450463 -142237391 + MLT1E2 LTR MaLR 212 626 0 267 321 61 44 chr2 108450496 108451447 -142236407 + L1MEc LINE L1 839 1643 -4572 7548 205 67 22 chr2 108451872 108453728 -142234126 - L1MC3 LINE L1 -42 7743 5804 460 230 134 52 chr2 108453837 108454057 -142233797 - L1MCa LINE L1 -3995 2569 2310 1387 136 41 0 chr2 108454057 108454278 -142233576 - MER30 DNA MER1_type 0 230 1 460 230 134 52 chr2 108454278 108454400 -142233454 - L1MCa LINE L1 -4254 2310 2199 1067 226 87 55 chr2 108454414 108455063 -142232791 - L1MCa LINE L1 -4425 2139 1310 255 61 0 0 chr2 108455063 108455096 -142232758 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1067 226 87 55 chr2 108455096 108455179 -142232675 - L1MCa LINE L1 -5254 1310 1231 1615 249 22 32 chr2 108455413 108455920 -142231934 - L1MC3 LINE L1 -743 5403 5162 2397 95 0 0 chr2 108455920 108456225 -142231629 - AluY SINE Alu -6 305 1 1615 249 22 32 chr2 108456225 108456516 -142231338 - L1MC3 LINE L1 -984 5162 4870 1240 211 82 75 chr2 108456519 108456983 -142230871 - MLT1C LTR MaLR 0 467 1 2438 269 39 43 chr2 108457005 108457461 -142230393 - L1MC3 LINE L1 -2701 3445 2989 1729 178 7 3 chr2 108457461 108457754 -142230100 + AluSx SINE Alu 1 294 -18 2438 269 39 43 chr2 108457754 108458634 -142229220 - L1MC3 LINE L1 -3157 2989 2175 2772 258 23 66 chr2 108458791 108458906 -142228948 - L1MCa LINE L1 -4862 1183 1065 1425 195 73 153 chr2 108458906 108459696 -142228158 - LTR8A LTR ERV1 0 727 1 2772 258 23 66 chr2 108459696 108459831 -142228023 - L1MCa LINE L1 -4980 1065 926 1543 155 76 57 chr2 108459831 108460199 -142227655 - THE1C LTR MaLR 0 375 1 2772 258 23 66 chr2 108460199 108461010 -142226844 - L1MCa LINE L1 -5119 926 167 1791 216 95 14 chr2 108461131 108461553 -142226301 + MLT2B1 LTR ERVL 1 456 -64 423 56 0 0 chr2 108461553 108461607 -142226247 + (CA)n Simple_repeat Simple_repeat 1 54 0 364 346 47 38 chr2 108462031 108462372 -142225482 - ERVL LTR ERVL -1281 4483 4140 2190 111 13 0 chr2 108462477 108462783 -142225071 - AluSg SINE Alu 0 310 1 8239 192 26 37 chr2 108464721 108466065 -142221789 - L1MB1 LINE L1 -94 7514 6157 2164 129 13 0 chr2 108466065 108466374 -142221480 - AluSp SINE Alu 0 313 1 8239 192 26 37 chr2 108466374 108467879 -142219975 - L1MB1 LINE L1 -1451 6157 4688 1786 235 15 28 chr2 108467879 108468206 -142219648 - MSTD LTR MaLR 0 396 73 2215 138 8 24 chr2 108468206 108468576 -142219278 + THE1B LTR MaLR 1 364 0 1786 235 15 28 chr2 108468576 108468648 -142219206 - MSTD LTR MaLR -323 73 2 2722 255 35 9 chr2 108468651 108469710 -142218144 - L1MB1 LINE L1 -2880 4685 3496 1834 254 55 23 chr2 108469752 108470753 -142217101 - L1MB1 LINE L1 -4531 2965 2089 358 318 33 37 chr2 108471156 108471401 -142216453 - L1MB1 LINE L1 -5897 1599 1356 199 313 71 45 chr2 108471629 108471741 -142216113 - MIR SINE MIR -10 252 138 849 282 30 8 chr2 108471943 108472209 -142215645 - LTR16A1 LTR ERVL 0 457 186 236 185 154 0 chr2 108473071 108473136 -142214718 - LTR33A LTR ERVL -8 515 441 4578 253 94 8 chr2 108473148 108473215 -142214639 + L1PA13 LINE L1 2 62 -6725 2183 114 7 0 chr2 108473215 108473512 -142214342 - AluSq SINE Alu -14 299 1 4578 253 94 8 chr2 108473512 108474601 -142213253 + L1PA13 LINE L1 62 1258 -5529 1388 176 12 0 chr2 108474632 108474888 -142212966 + L1PA13 LINE L1 1407 1665 -5122 2542 93 6 0 chr2 108474888 108475244 -142212610 + L1PA13 LINE L1 5806 6163 0 262 305 82 10 chr2 108475246 108475455 -142212399 - LTR33A LTR ERVL -74 449 227 378 353 103 41 chr2 108476162 108476598 -142211256 + L1ME LINE L1 610 1072 -5562 2081 103 0 10 chr2 108476599 108476899 -142210955 + AluY SINE Alu 1 297 -14 589 275 65 73 chr2 108477053 108477916 -142209938 + L1ME LINE L1 1014 1922 -4903 2420 128 12 5 chr2 108477916 108478342 -142209512 - L1PA13 LINE L1 0 6163 5762 589 275 65 73 chr2 108478342 108478612 -142209242 + L1ME LINE L1 1922 2192 -4633 414 221 66 8 chr2 108478631 108478778 -142209076 + L1MC/D LINE L1 5312 5470 -723 381 58 0 0 chr2 108478862 108478914 -142208940 + (CA)n Simple_repeat Simple_repeat 1 52 0 1636 193 19 25 chr2 108479275 108479638 -142208216 + THE1C LTR MaLR 15 375 0 1791 116 28 39 chr2 108479985 108480269 -142207585 - AluSq SINE Alu -3 310 30 1415 269 102 38 chr2 108481173 108481723 -142206131 + MLT1E LTR MaLR 9 593 0 399 289 79 7 chr2 108482174 108482326 -142205528 + MER58C DNA MER1_type 53 215 0 270 250 35 0 chr2 108482326 108482442 -142205412 + L1ME2 LINE L1 6045 6164 0 191 218 18 0 chr2 108482971 108483026 -142204828 + A-rich Low_complexity Low_complexity 4 59 0 834 243 10 123 chr2 108483674 108484082 -142203772 + MLT1A1 LTR MaLR 4 365 0 354 176 22 11 chr2 108484924 108485015 -142202839 + GA-rich Low_complexity Low_complexity 3 94 0 3081 251 56 22 chr2 108485204 108486134 -142201720 - L1MCb LINE L1 -4850 1195 539 195 42 0 0 chr2 108486134 108486158 -142201696 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 3081 251 56 22 chr2 108486158 108486714 -142201140 - L1MCb LINE L1 -5506 539 3 2635 213 19 12 chr2 108486745 108487273 -142200581 + L1MC/D LINE L1 4590 5127 -1202 4524 114 48 38 chr2 108487273 108487725 -142200129 - MER4E LTR ERV1 0 779 314 2171 118 0 19 chr2 108487725 108488039 -142199815 + AluSc SINE Alu 1 308 -1 4524 114 48 38 chr2 108488039 108488357 -142199497 - MER4E LTR ERV1 -465 314 1 2635 213 19 12 chr2 108488357 108488821 -142199033 + L1MC/D LINE L1 5127 5586 -743 222 37 0 0 chr2 108488821 108488848 -142199006 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1010 155 164 56 chr2 108488861 108489093 -142198761 - AluJb SINE Alu -24 288 32 1520 175 64 9 chr2 108489093 108489419 -142198435 + MER50 LTR ERV1 3 346 -388 2156 73 9 73 chr2 108489632 108489960 -142197894 - AluY SINE Alu -4 307 1 276 269 44 34 chr2 108490117 108490289 -142197565 - MLT1J1 LTR MaLR 0 446 268 3305 185 83 5 chr2 108490652 108491399 -142196455 - L1MC2 LINE L1 -96 6666 5862 3444 136 17 0 chr2 108491400 108491997 -142195857 + L1PA11 LINE L1 4747 5353 -793 4723 102 3 17 chr2 108492005 108492700 -142195154 + L1PA11 LINE L1 5479 6173 -1 957 201 48 58 chr2 108492710 108493165 -142194689 - L1MC2 LINE L1 -743 5821 5411 620 239 97 0 chr2 108493227 108493403 -142194451 + MER20 DNA MER1_type 27 219 0 1177 278 32 17 chr2 108493823 108494295 -142193559 + L1MCb LINE L1 3 481 -5564 1635 237 26 4 chr2 108494357 108494892 -142192962 - L1MC2 LINE L1 -2922 3642 3096 1309 157 5 5 chr2 108494893 108495109 -142192745 + AluJo SINE Alu 87 302 -10 1894 217 107 30 chr2 108495110 108495762 -142192092 - L1MC2 LINE L1 -3458 3106 2506 1998 102 11 28 chr2 108495762 108496046 -142191808 - AluSc SINE Alu -30 279 1 1894 217 107 30 chr2 108496046 108496509 -142191345 - L1MC2 LINE L1 -4058 2506 1844 1985 122 7 18 chr2 108496509 108496815 -142191039 - AluSx SINE Alu 0 303 1 1894 217 107 30 chr2 108496815 108496851 -142191003 - L1MC2 LINE L1 -4720 1844 1812 2697 203 30 62 chr2 108496884 108497779 -142190075 - L1MC2 LINE L1 -4851 1194 786 2040 218 55 59 chr2 108497779 108498393 -142189461 - LTR9 LTR ERV1 0 612 1 2697 203 30 62 chr2 108498393 108498826 -142189028 - L1MC2 LINE L1 -5259 786 341 2117 221 63 20 chr2 108498845 108499429 -142188425 - L1MCa LINE L1 -5809 617 9 2364 77 7 7 chr2 108499689 108499986 -142187868 + AluYa5 SINE Alu 1 297 -14 204 234 138 21 chr2 108500451 108500545 -142187309 - L3 LINE CR1 -853 724 620 206 167 0 21 chr2 108500583 108500631 -142187223 + (TA)n Simple_repeat Simple_repeat 1 47 0 29 0 0 0 chr2 108502402 108502431 -142185423 + AT_rich Low_complexity Low_complexity 1 29 0 220 250 278 0 chr2 108502964 108503072 -142184782 - MIR SINE MIR -1 261 124 3716 206 122 9 chr2 108504527 108505505 -142182349 - L1MC3 LINE L1 -6 7779 6692 3330 124 27 8 chr2 108505610 108506127 -142181727 - MER1A DNA MER1_type 0 527 1 647 288 90 80 chr2 108506187 108506813 -142181041 + HAL1 LINE L1 995 1634 -873 2342 52 0 0 chr2 108506813 108507101 -142180753 - L1PA5 LINE L1 -7 6147 5860 647 288 90 80 chr2 108507101 108507388 -142180466 + HAL1 LINE L1 1634 1917 -590 215 324 129 18 chr2 108507998 108508168 -142179686 - L2 LINE L2 -1070 2244 2056 486 286 94 41 chr2 108508175 108508420 -142179434 - MIR SINE MIR -4 258 1 232 333 32 21 chr2 108510759 108510852 -142177002 + L2 LINE L2 3216 3309 -4 220 289 24 36 chr2 108511443 108511526 -142176328 + MIR SINE MIR 48 129 -133 213 291 0 0 chr2 108513066 108513169 -142174685 + (CA)n Simple_repeat Simple_repeat 2 104 0 2300 107 3 3 chr2 108513904 108514212 -142173642 - AluSx SINE Alu -2 310 3 367 267 77 41 chr2 108514224 108514508 -142173346 - L1ME3A LINE L1 -1 6169 5874 413 297 73 30 chr2 108514590 108514755 -142173099 + L2 LINE L2 3142 3313 0 275 297 18 9 chr2 108516295 108516406 -142171448 + MER103 DNA DNA 48 159 -7 427 129 95 17 chr2 108517492 108517608 -142170246 + MER9 LTR ERVK 387 511 0 3662 100 25 31 chr2 108517611 108518222 -142169632 + HERVK9 LTR ERVK 5 611 -5305 30106 94 7 2 chr2 108518223 108522490 -142165364 + HERVK9 LTR ERVK 1348 5634 -282 1920 118 16 11 chr2 108522515 108522836 -142165018 + HERVK9 LTR ERVK 5635 5885 -31 1299 82 22 0 chr2 108522858 108523041 -142164813 + MER9 LTR ERVK 1 187 -324 699 102 0 0 chr2 108523041 108523139 -142164715 - AluY SINE Alu 0 311 214 1937 137 3 15 chr2 108523142 108523479 -142164375 + MER9 LTR ERVK 179 511 0 190 250 78 0 chr2 108524018 108524082 -142163772 - MIR SINE MIR -10 252 184 898 261 9 5 chr2 108524107 108524322 -142163532 + MER58A DNA MER1_type 3 218 -6 341 284 112 67 chr2 108524779 108524961 -142162893 + MIR SINE MIR 50 261 -1 1964 135 7 0 chr2 108526989 108527285 -142160569 - AluSx SINE Alu -14 298 1 378 206 0 0 chr2 108527624 108527697 -142160157 + MER5A DNA MER1_type 40 112 -77 857 176 103 2 chr2 108527850 108528085 -142159769 - L1MC3 LINE L1 -24 7761 6049 32 0 0 0 chr2 108528923 108528955 -142158899 + AT_rich Low_complexity Low_complexity 1 32 0 247 281 22 45 chr2 108529209 108529298 -142158556 + MIR3 SINE MIR 84 170 -38 2132 70 42 3 chr2 108529322 108529632 -142158222 - AluY SINE Alu 0 311 1 2099 94 3 30 chr2 108529696 108529995 -142157859 - AluSc SINE Alu -18 291 1 404 332 140 28 chr2 108530270 108531096 -142156758 + L2 LINE L2 2348 3265 -48 231 36 0 0 chr2 108533437 108533465 -142154389 + (TC)n Simple_repeat Simple_repeat 1 28 0 573 276 70 26 chr2 108535548 108535776 -142152078 - MIR SINE MIR -5 257 20 248 313 96 35 chr2 108536007 108536122 -142151732 + L2 LINE L2 3179 3300 -13 1472 239 17 3 chr2 108537695 108538051 -142149803 + MLT1A1 LTR MaLR 3 363 -2 186 356 50 38 chr2 108538231 108538492 -142149362 + L2 LINE L2 2623 2886 -428 772 215 118 0 chr2 108539753 108539948 -142147906 + MER20 DNA MER1_type 1 218 -1 2498 180 63 41 chr2 108540350 108540827 -142147027 + MLT2B3 LTR ERVL 5 497 -57 682 32 21 0 chr2 108540827 108540920 -142146934 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 2498 180 63 41 chr2 108540920 108540980 -142146874 + MLT2B3 LTR ERVL 497 554 0 26 30 0 0 chr2 108541174 108541207 -142146647 + AT_rich Low_complexity Low_complexity 1 33 0 648 261 26 49 chr2 108541228 108541573 -142146281 + L1ME4a LINE L1 5537 5873 -248 1202 143 0 46 chr2 108541681 108541877 -142145977 - AluJb SINE Alu -125 187 1 2102 134 3 0 chr2 108542202 108542509 -142145345 - AluSg SINE Alu -2 308 1 3356 211 48 13 chr2 108542776 108544387 -142143467 + L1M4c LINE L1 1770 3535 -2847 180 77 0 0 chr2 108544985 108545011 -142142843 + (A)n Simple_repeat Simple_repeat 1 26 0 3231 223 46 107 chr2 108545303 108545775 -142142079 + L1M4c LINE L1 3504 4003 -2379 2310 88 3 0 chr2 108545775 108546070 -142141784 + AluSx SINE Alu 1 296 -16 3231 223 46 107 chr2 108546070 108546280 -142141574 + L1M4c LINE L1 4003 4224 -2158 2048 112 0 7 chr2 108546280 108546607 -142141247 + AluSx SINE Alu 1 325 0 3231 223 46 107 chr2 108546607 108546803 -142141051 + L1M4c LINE L1 4224 4430 -1952 931 135 0 0 chr2 108546803 108546936 -142140918 + FLAM_C SINE Alu 1 133 -10 2082 143 0 0 chr2 108546943 108547237 -142140617 + AluSx SINE Alu 1 294 -18 3231 223 46 107 chr2 108547237 108547911 -142139943 + L1M4c LINE L1 4436 5096 -1286 3733 130 16 2 chr2 108547916 108548532 -142139322 - L1MA5 LINE L1 0 6300 5676 2006 102 84 0 chr2 108549785 108550059 -142137795 - AluSg SINE Alu -13 297 1 24 0 0 0 chr2 108550282 108550306 -142137548 + AT_rich Low_complexity Low_complexity 1 24 0 5591 143 16 18 chr2 108550873 108552288 -142135566 - L1MA5 LINE L1 -613 5687 4264 517 148 0 0 chr2 108552330 108552411 -142135443 + MER4C LTR ERV1 377 457 -8 441 200 52 9 chr2 108552412 108552527 -142135327 - L1MA5 LINE L1 -2492 3654 3535 2387 154 26 89 chr2 108552547 108553133 -142134721 - MER21A LTR ERV1 -6 925 377 891 112 240 5 chr2 108553138 108553334 -142134520 - MER21A LTR ERV1 -666 265 24 2271 174 58 31 chr2 108553334 108553655 -142134199 - L1 LINE L1 -1937 4209 3865 1666 155 50 24 chr2 108553655 108553952 -142133902 - AluJb SINE Alu -7 305 1 2271 174 58 31 chr2 108553952 108554181 -142133673 - L1 LINE L1 -2281 3865 3644 1299 146 11 133 chr2 108554181 108554811 -142133043 + MER4C LTR ERV1 1 465 0 2437 190 40 22 chr2 108554811 108555248 -142132606 - L1 LINE L1 -2499 3647 3192 2227 102 36 7 chr2 108555248 108555551 -142132303 - AluSp SINE Alu -1 312 1 2437 190 40 22 chr2 108555551 108555797 -142132057 - L1 LINE L1 -2954 3192 2952 2131 112 0 42 chr2 108555797 108555963 -142131891 - AluSc SINE Alu -9 300 152 3928 111 9 46 chr2 108555963 108556592 -142131262 + LTR14B LTR ERVK 3 608 0 2131 112 0 42 chr2 108556592 108556738 -142131116 - AluSc SINE Alu -157 152 1 3150 195 20 3 chr2 108556738 108557436 -142130418 - L1 LINE L1 -3184 2962 2253 2095 116 0 10 chr2 108557449 108557741 -142130113 + AluSg SINE Alu 15 303 -7 2314 124 92 5 chr2 108557745 108558156 -142129698 - L1MA2 LINE L1 -7 6297 5851 2098 123 0 0 chr2 108558173 108558487 -142129367 - AluSx SINE Alu 0 314 1 4980 201 41 21 chr2 108558487 108559082 -142128772 - L1 LINE L1 -2356 3790 3208 2333 116 3 0 chr2 108559082 108559393 -142128461 - AluSp SINE Alu -1 312 1 4980 201 41 21 chr2 108559393 108560089 -142127765 - L1 LINE L1 -2938 3208 2473 3496 155 28 5 chr2 108560089 108560728 -142127126 - Tigger2 DNA MER2_type -2063 655 2 2143 81 53 0 chr2 108560865 108561148 -142126706 + AluY SINE Alu 1 298 -13 189 74 0 0 chr2 108561588 108561615 -142126239 + (A)n Simple_repeat Simple_repeat 1 27 0 1386 237 122 2 chr2 108561808 108562285 -142125569 + L1MD2 LINE L1 5811 6344 -15 1040 220 64 7 chr2 108562291 108562573 -142125281 + L1M4 LINE L1 5320 5617 -557 2261 102 7 0 chr2 108562923 108563216 -142124638 - AluSp SINE Alu -17 296 2 21 0 0 0 chr2 108563223 108563244 -142124610 + AT_rich Low_complexity Low_complexity 1 21 0 2710 165 12 34 chr2 108564062 108564104 -142123750 - L1MCb LINE L1 -4851 1194 1153 1623 189 55 3 chr2 108564104 108564447 -142123407 - MLT1A1 LTR MaLR -3 362 2 2710 165 12 34 chr2 108564447 108564507 -142123347 - L1MCb LINE L1 -4892 1153 1093 2503 84 0 0 chr2 108564507 108564818 -142123036 - AluY SINE Alu 0 311 1 2710 165 12 34 chr2 108564818 108565530 -142122324 - L1MCb LINE L1 -4952 1093 721 262 179 0 0 chr2 108565538 108565594 -142122260 + L1MD3 LINE L1 7581 7636 -359 567 242 65 5 chr2 108565605 108565791 -142122063 + L1MD3 LINE L1 7746 7942 -53 318 226 12 60 chr2 108565861 108565945 -142121909 - L1MD3 LINE L1 -1433 6562 6483 1870 138 24 10 chr2 108566183 108566481 -142121373 + AluSx SINE Alu 11 312 0 1065 169 0 0 chr2 108566481 108566658 -142121196 + AluSg/x SINE Alu 132 308 -2 2391 68 0 0 chr2 108567074 108567367 -142120487 - AluY SINE Alu -18 293 1 1207 188 13 0 chr2 108567367 108567642 -142120212 - MER33 DNA MER1_type -52 272 1 1980 106 46 3 chr2 108568005 108568287 -142119567 - AluSx SINE Alu -18 294 1 687 135 8 40 chr2 108569071 108569197 -142118657 + FLAM_C SINE Alu 22 143 0 2420 73 3 3 chr2 108569216 108569516 -142118338 + AluSc SINE Alu 1 300 -9 1811 164 0 32 chr2 108569525 108569836 -142118018 + AluJb SINE Alu 1 301 -11 182 205 51 0 chr2 108569958 108569997 -142117857 + MIR SINE MIR 30 70 -138 278 306 196 10 chr2 108570198 108570215 -142117639 - MIR SINE MIR -24 238 225 2276 74 10 26 chr2 108570215 108570524 -142117330 - AluY SINE Alu -7 304 1 278 306 196 10 chr2 108570524 108570705 -142117149 - MIR SINE MIR -37 225 3 1940 141 3 10 chr2 108571231 108571529 -142116325 - AluSx SINE Alu -14 298 3 2140 107 13 10 chr2 108572131 108572430 -142115424 - AluSc SINE Alu -9 300 1 1979 52 0 0 chr2 108572641 108572872 -142114982 + AluY SINE Alu 70 300 -11 690 169 125 7 chr2 108574439 108574575 -142113279 - AluJb SINE Alu -24 288 137 1860 156 16 10 chr2 108575176 108575484 -142112370 - AluJb SINE Alu -2 310 1 1532 235 90 0 chr2 108575992 108576438 -142111416 - L1ME1 LINE L1 -5 6161 5676 491 127 0 15 chr2 108576433 108576535 -142111319 - L1MB7 LINE L1 -1 6177 6079 * 238 196 0 0 chr2 108576527 108576578 -142111276 - L1ME1 LINE L1 -664 5695 5645 * 1054 205 156 19 chr2 108576756 108577161 -142110693 - MLT1E LTR MaLR -16 577 67 362 254 36 29 chr2 108578431 108578474 -142109380 + MER112 DNA MER1_type 115 156 -104 1421 198 6 53 chr2 108578474 108578792 -142109062 - AluJo SINE Alu -9 303 1 362 254 36 29 chr2 108578792 108578886 -142108968 + MER112 DNA MER1_type 156 253 -7 291 228 123 87 chr2 108579347 108579682 -142108172 - L1MEd LINE L1 -4772 1357 1010 2262 100 3 3 chr2 108579682 108579981 -142107873 - AluSq SINE Alu -14 299 1 291 228 123 87 chr2 108579981 108580059 -142107795 - L1MEd LINE L1 -5119 1010 936 303 154 77 0 chr2 108580789 108580854 -142107000 + L1MC5 LINE L1 7269 7338 -623 518 225 238 0 chr2 108580854 108581005 -142106849 + MER5A DNA MER1_type 2 188 -1 340 259 142 70 chr2 108581109 108581353 -142106501 + L1MC5 LINE L1 7250 7524 -437 2061 113 30 3 chr2 108581353 108581654 -142106200 + AluSc SINE Alu 1 309 0 340 259 142 70 chr2 108581654 108581725 -142106129 + L1MC5 LINE L1 7524 7588 -373 2249 109 10 3 chr2 108582100 108582404 -142105450 - AluSc SINE Alu -3 306 1 2135 112 7 3 chr2 108584137 108584431 -142103423 + AluSc SINE Alu 1 295 -14 301 244 87 17 chr2 108584473 108584588 -142103266 + L1MC5 LINE L1 7656 7778 -183 231 293 93 13 chr2 108584663 108584738 -142103116 + MIR SINE MIR 2 82 -180 2332 89 10 3 chr2 108585190 108585493 -142102361 + AluY SINE Alu 1 305 -6 253 270 35 43 chr2 108586160 108586275 -142101579 - MIR SINE MIR -80 182 69 21 57 0 0 chr2 108586657 108586692 -142101162 + AT_rich Low_complexity Low_complexity 1 35 0 2529 79 114 8 chr2 108586704 108587068 -142100786 + MLT2A1 LTR ERVL 1 411 -33 269 26 0 26 chr2 108587068 108587107 -142100747 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 2529 79 114 8 chr2 108587107 108587136 -142100718 + MLT2A1 LTR ERVL 411 436 -8 2107 122 3 3 chr2 108587641 108587945 -142099909 + AluSg1 SINE Alu 1 304 -5 1857 165 0 3 chr2 108588370 108588661 -142099193 - AluSx SINE Alu -22 290 1 256 348 54 22 chr2 108588713 108588805 -142099049 - MIR SINE MIR -78 130 36 686 69 0 0 chr2 108589364 108589451 -142098403 + AluY SINE Alu 1 87 -224 1007 156 53 73 chr2 108590265 108590567 -142097287 + MER33 DNA MER1_type 1 279 -45 883 193 0 7 chr2 108590579 108590729 -142097125 - FRAM SINE Alu -13 153 5 331 319 106 0 chr2 108590898 108591039 -142096815 + MIR3 SINE MIR 45 200 -8 2075 145 0 3 chr2 108592152 108592462 -142095392 - AluSx SINE Alu -3 309 1 198 143 0 0 chr2 108595139 108595174 -142092680 + (ATG)n Simple_repeat Simple_repeat 2 36 0 969 207 31 51 chr2 108595174 108595430 -142092424 - MIR SINE MIR -10 252 2 180 111 0 0 chr2 108595872 108595899 -142091955 + (A)n Simple_repeat Simple_repeat 1 27 0 31 0 0 0 chr2 108596832 108596863 -142090991 + AT_rich Low_complexity Low_complexity 1 31 0 357 259 121 60 chr2 108597533 108597765 -142090089 + L1ME4a LINE L1 5773 6018 -103 272 332 25 26 chr2 108597896 108598069 -142089785 + MIR SINE MIR 24 197 -58 627 285 42 23 chr2 108598575 108598789 -142089065 + MIR SINE MIR 24 241 -21 23 54 0 0 chr2 108599573 108599610 -142088244 + AT_rich Low_complexity Low_complexity 1 37 0 1991 137 7 3 chr2 108599662 108599962 -142087892 - AluSx SINE Alu -9 303 3 393 301 66 15 chr2 108601194 108601330 -142086524 - MIR3 SINE MIR -57 151 9 2229 99 0 0 chr2 108601960 108602264 -142085590 + AluSx SINE Alu 1 304 0 1671 170 34 14 chr2 108602292 108602586 -142085268 + AluJb SINE Alu 1 300 -12 267 263 0 0 chr2 108603215 108603295 -142084559 + T-rich Low_complexity Low_complexity 1 80 0 966 171 17 11 chr2 108604215 108604391 -142083463 + AluSg/x SINE Alu 132 308 -2 1572 92 0 88 chr2 108605162 108605412 -142082442 - AluY SINE Alu -83 228 1 202 164 73 73 chr2 108605707 108605762 -142082092 - MIR SINE MIR -21 241 187 1560 117 0 5 chr2 108607081 108607349 -142080505 + AluSg/x SINE Alu 68 334 0 433 297 84 4 chr2 108607355 108607628 -142080226 + L1ME4a LINE L1 5533 5827 -294 227 216 0 0 chr2 108607710 108607747 -142080107 + AluJo SINE Alu 1 37 -266 2190 103 10 0 chr2 108607747 108608037 -142079817 - AluSx SINE Alu -19 293 1 1636 156 0 8 chr2 108608037 108608300 -142079554 + AluJo SINE Alu 26 286 -26 2227 110 3 7 chr2 108608308 108608616 -142079238 + AluSq SINE Alu 1 307 -6 237 220 34 0 chr2 108608672 108608731 -142079123 + L1ME4a LINE L1 5978 6038 -83 2183 97 7 26 chr2 108609386 108609695 -142078159 + AluY SINE Alu 1 303 -8 1815 165 31 8 chr2 108609769 108610120 -142077734 + L1MB8 LINE L1 5820 6178 0 198 348 136 0 chr2 108610690 108610808 -142077046 + L2 LINE L2 3137 3270 -2 1967 116 0 42 chr2 108611381 108611691 -142076163 + AluSx SINE Alu 4 300 -12 1999 137 19 23 chr2 108611697 108612004 -142075850 + AluJb SINE Alu 1 306 -6 419 346 144 12 chr2 108612307 108612564 -142075290 + L3 LINE CR1 1209 1499 -78 549 239 131 71 chr2 108612607 108612959 -142074895 + L1MC4a LINE L1 5520 5892 -1916 382 292 42 48 chr2 108613432 108613477 -142074377 - L3 LINE CR1 -1037 540 496 2147 106 3 35 chr2 108613477 108613788 -142074066 - AluSx SINE Alu -11 301 1 382 292 42 48 chr2 108613788 108613910 -142073944 - L3 LINE CR1 -1081 496 374 1654 136 0 34 chr2 108614331 108614596 -142073258 + AluJo SINE Alu 1 256 -56 279 159 0 0 chr2 108614632 108614676 -142073178 + Alu SINE Alu 1 44 -256 425 195 39 0 chr2 108614677 108614754 -142073100 + AluJo/FRAM SINE Alu 198 277 -35 2389 63 27 3 chr2 108614808 108615109 -142072745 + AluY SINE Alu 1 308 -3 2105 125 0 7 chr2 108615293 108615589 -142072265 + AluSc SINE Alu 1 294 -15 2280 78 7 3 chr2 108615600 108615895 -142071959 + AluSp SINE Alu 1 296 -17 22 0 0 0 chr2 108616055 108616077 -142071777 + AT_rich Low_complexity Low_complexity 1 22 0 2433 69 0 13 chr2 108616077 108616382 -142071472 + AluY SINE Alu 1 301 -10 2313 100 0 3 chr2 108616392 108616701 -142071153 + AluSc SINE Alu 2 309 0 2157 122 0 13 chr2 108617899 108618202 -142069652 - AluSg SINE Alu -11 299 1 1249 212 51 53 chr2 108618349 108618482 -142069372 + Charlie1b DNA MER1_type 13 145 -2616 2165 109 0 10 chr2 108618482 108618784 -142069070 - AluSc SINE Alu -10 299 1 1249 212 51 53 chr2 108618784 108618976 -142068878 + Charlie1b DNA MER1_type 145 339 -2422 2332 95 0 3 chr2 108618976 108619270 -142068584 + AluSq SINE Alu 1 293 -20 1249 212 51 53 chr2 108619270 108619377 -142068477 + Charlie1b DNA MER1_type 339 445 -78 521 110 24 0 chr2 108619378 108619460 -142068394 + AluSc SINE Alu 1 84 -225 826 102 0 87 chr2 108619460 108619516 -142068338 + AluSc SINE Alu 29 70 -239 2399 68 0 0 chr2 108619516 108619808 -142068046 + AluY SINE Alu 1 292 -19 826 102 0 87 chr2 108619808 108619878 -142067976 + AluSc SINE Alu 70 144 -165 1742 61 0 5 chr2 108619878 108620091 -142067763 + AluY SINE Alu 1 212 -99 661 83 0 0 chr2 108620415 108620499 -142067355 + AluY SINE Alu 212 295 -16 1082 156 10 16 chr2 108620499 108620670 -142067184 + AluSc SINE Alu 119 290 -19 1703 75 58 9 chr2 108620670 108620896 -142066958 + AluSc SINE Alu 72 308 -1 1082 156 10 16 chr2 108620896 108620916 -142066938 + AluSc SINE Alu 290 309 0 227 200 143 0 chr2 108620922 108620992 -142066862 + Charlie1b DNA MER1_type 436 515 -8 620 259 73 10 chr2 108621213 108621418 -142066436 - MER58A DNA MER1_type -6 218 1 21 0 0 0 chr2 108621665 108621686 -142066168 + AT_rich Low_complexity Low_complexity 1 21 0 324 295 257 12 chr2 108622952 108623271 -142064583 + L2 LINE L2 87 483 -2831 615 188 0 26 chr2 108623272 108623389 -142064465 - AluJo SINE Alu -113 199 86 185 311 197 39 chr2 108623393 108624053 -142063801 + L2 LINE L2 727 1490 -1824 367 193 57 0 chr2 108624719 108624807 -142063047 + L1MD2 LINE L1 5678 5770 -589 919 183 0 12 chr2 108624808 108624977 -142062877 + AluSg/x SINE Alu 137 303 -9 396 187 84 53 chr2 108624977 108625111 -142062743 + L1MD2 LINE L1 5759 5887 -472 2238 114 0 0 chr2 108625111 108625419 -142062435 + AluSx SINE Alu 1 308 -4 396 187 84 53 chr2 108625419 108625704 -142062150 + L1MD2 LINE L1 5887 6249 -110 1445 127 40 4 chr2 108625704 108625932 -142061922 - MER46A DNA MER2_type 0 236 1 396 187 84 53 chr2 108625932 108626035 -142061819 + L1MD2 LINE L1 6249 6347 -12 189 330 37 37 chr2 108626341 108626450 -142061404 - L3 LINE CR1 -142 1435 1327 201 244 0 0 chr2 108626950 108626995 -142060859 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1326 203 7 29 chr2 108628228 108628534 -142059320 + AluJo SINE Alu 1 299 -13 1945 87 17 70 chr2 108629309 108629607 -142058247 + AluSx SINE Alu 1 282 -30 189 0 0 0 chr2 108629612 108629633 -142058221 + (CAT)n Simple_repeat Simple_repeat 1 21 0 1417 217 13 37 chr2 108629639 108629938 -142057916 + AluJo SINE Alu 2 293 -9 2105 120 30 0 chr2 108630351 108630651 -142057203 + AluSx SINE Alu 1 309 -3 4449 158 13 4 chr2 108630722 108631418 -142056436 - MER44D DNA MER2_type -31 574 1 595 200 7 0 chr2 108631418 108631553 -142056301 + L1M4 LINE L1 4338 4473 -1673 295 93 0 37 chr2 108631572 108631626 -142056228 + AluSc SINE Alu 242 293 -6 1687 115 115 0 chr2 108631702 108631963 -142055891 - AluSc SINE Alu -18 291 1 278 318 59 0 chr2 108632127 108632212 -142055642 - MIR3 SINE MIR -54 154 65 231 122 0 61 chr2 108632464 108632513 -142055341 - Alu SINE Alu 0 301 256 360 190 288 27 chr2 108632694 108632878 -142054976 + HAL1 LINE L1 1113 1344 -1163 1263 243 148 54 chr2 108632898 108633055 -142054799 + HAL1 LINE L1 1480 1621 -886 1620 110 4 4 chr2 108633055 108633282 -142054572 + AluSg/x SINE Alu 76 302 -8 1263 243 148 54 chr2 108633282 108633512 -142054342 + HAL1 LINE L1 1621 1828 -679 180 0 0 0 chr2 108633512 108633532 -142054322 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 1263 243 148 54 chr2 108633532 108633849 -142054005 + HAL1 LINE L1 1828 2275 -232 2185 68 26 19 chr2 108633849 108634158 -142053696 + AluY SINE Alu 1 311 0 1263 243 148 54 chr2 108634158 108634267 -142053587 + HAL1 LINE L1 2275 2372 -135 508 244 78 0 chr2 108634275 108634390 -142053464 + FLAM_A SINE Alu 13 136 -6 1702 116 112 0 chr2 108634514 108634772 -142053082 - AluSg SINE Alu -4 306 20 239 211 0 0 chr2 108635396 108635434 -142052420 + AluJ/monomer SINE Alu 1 38 -264 304 314 115 90 chr2 108636465 108637222 -142050632 + L1M2 LINE L1 368 1143 -5706 2333 105 3 0 chr2 108637365 108637671 -142050183 + AluSx SINE Alu 2 308 -4 23 33 0 0 chr2 108639362 108639392 -142048462 + AT_rich Low_complexity Low_complexity 1 30 0 277 381 63 41 chr2 108639398 108639792 -142048062 - L2 LINE L2 -44 3228 2826 201 108 0 0 chr2 108642120 108642157 -142045697 + (A)n Simple_repeat Simple_repeat 1 37 0 654 233 158 18 chr2 108642811 108643039 -142044815 - MER99 DNA DNA -5 823 564 630 232 195 12 chr2 108643066 108643307 -142044547 - MER99 DNA DNA -339 489 205 387 237 0 0 chr2 108643898 108643974 -142043880 - MER99 DNA DNA -735 93 18 187 279 36 36 chr2 108644172 108644283 -142043571 - L2 LINE L2 0 3313 3203 3291 30 0 8 chr2 108644302 108644695 -142043159 + L1PA4 LINE L1 4836 5225 -921 7359 33 1 1 chr2 108644708 108645532 -142042322 + L1PA4 LINE L1 5329 6152 -3 1118 250 80 27 chr2 108645587 108645738 -142042116 - MSTD LTR MaLR 0 396 254 672 30 60 0 chr2 108645738 108645838 -142042016 + (GGAA)n Simple_repeat Simple_repeat 1 106 0 1118 250 80 27 chr2 108645838 108646062 -142041792 - MSTD LTR MaLR -142 254 1 668 248 175 52 chr2 108646288 108646768 -142041086 + MLT1H LTR MaLR 3 546 -3 242 270 54 36 chr2 108647051 108647162 -142040692 + MLT1-int LTR MaLR 433 545 -826 617 242 66 28 chr2 108647330 108647512 -142040342 - MER5A DNA MER1_type 0 189 1 616 247 114 31 chr2 108647737 108647964 -142039890 + MLT1H LTR MaLR 55 300 -249 455 269 80 33 chr2 108648393 108648605 -142039249 - L2 LINE L2 -1 3312 3091 1504 309 122 11 chr2 108648653 108649309 -142038545 - L2 LINE L2 -357 2957 2229 1091 180 13 8 chr2 108649315 108649655 -142038199 - MLT1B LTR MaLR -11 615 1 758 295 52 0 chr2 108649655 108649926 -142037928 - L2 LINE L2 -1087 2227 1943 2112 57 60 18 chr2 108649940 108650222 -142037632 + AluY SINE Alu 1 294 -17 211 281 18 0 chr2 108650225 108650282 -142037572 + (CAA)n Simple_repeat Simple_repeat 3 60 0 206 306 46 65 chr2 108650349 108650397 -142037457 - MIR SINE MIR -123 139 92 693 230 85 18 chr2 108650397 108650562 -142037292 - MER45A DNA AcHobo 0 178 3 206 306 46 65 chr2 108650562 108650621 -142037233 - MIR SINE MIR -170 92 34 689 297 42 8 chr2 108651980 108652219 -142035635 + MIR SINE MIR 7 253 -9 31 58 0 0 chr2 108653403 108653455 -142034399 + AT_rich Low_complexity Low_complexity 1 52 0 2333 105 0 0 chr2 108655501 108655805 -142032049 + AluSq SINE Alu 1 304 -9 237 329 0 59 chr2 108656329 108656414 -142031440 - L2 LINE L2 -43 3229 3150 692 297 71 17 chr2 108656667 108656906 -142030948 + MIR SINE MIR 11 262 0 684 281 56 74 chr2 108657564 108658268 -142029586 + MER77 LTR ERV1 24 679 -23 2340 71 24 3 chr2 108658274 108658569 -142029285 + AluY SINE Alu 1 301 -10 642 247 39 11 chr2 108658666 108658848 -142029006 + MER5A DNA MER1_type 1 187 -2 597 283 27 78 chr2 108658877 108659135 -142028719 + MIR SINE MIR 17 261 -1 29 0 0 0 chr2 108659651 108659680 -142028174 + AT_rich Low_complexity Low_complexity 1 29 0 378 0 0 0 chr2 108659759 108659801 -142028053 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 204 111 0 0 chr2 108659833 108659860 -142027994 + MER5A DNA MER1_type 163 189 0 259 282 14 0 chr2 108659967 108660038 -142027816 + MIR SINE MIR 64 135 -127 2319 80 0 0 chr2 108660106 108660395 -142027459 + AluY SINE Alu 1 289 -22 279 71 0 0 chr2 108660879 108660921 -142026933 + (CA)n Simple_repeat Simple_repeat 2 43 0 414 0 0 0 chr2 108661252 108661298 -142026556 + (TG)n Simple_repeat Simple_repeat 2 47 0 746 268 11 0 chr2 108661336 108661519 -142026335 + L1MEd LINE L1 2 186 -5933 567 250 55 14 chr2 108661939 108662159 -142025695 + L1MEd LINE L1 669 897 -5222 1141 92 6 58 chr2 108663536 108663710 -142024144 - AluY SINE Alu -15 296 132 224 288 0 96 chr2 108664258 108664383 -142023471 + MIR SINE MIR 89 201 -61 197 309 112 51 chr2 108664494 108664672 -142023182 + MIR SINE MIR 22 210 -52 184 298 35 0 chr2 108665964 108666021 -142021833 + MIR SINE MIR 88 146 -116 1917 133 39 0 chr2 108666111 108666390 -142021464 - AluSx SINE Alu -22 290 1 207 0 0 0 chr2 108666632 108666655 -142021199 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2304 86 0 23 chr2 108666658 108666960 -142020894 - AluSg SINE Alu -15 295 1 2129 135 22 3 chr2 108667340 108667702 -142020152 + L1MB3 LINE L1 5777 6145 -38 180 0 0 0 chr2 108667703 108667723 -142020131 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 7621 22 0 0 chr2 108667762 108668598 -142019256 - L1PA2 LINE L1 0 6155 5320 404 206 145 0 chr2 108668679 108668810 -142019044 - L1MD1 LINE L1 0 6242 6093 1406 113 27 54 chr2 108668855 108669076 -142018778 - AluSx SINE Alu -76 236 22 3210 253 72 19 chr2 108669104 108670443 -142017411 - L1MD2 LINE L1 -312 6858 5443 968 194 85 32 chr2 108670467 108670714 -142017140 - L1MD2 LINE L1 -4990 1970 1711 7996 202 35 35 chr2 108670838 108670925 -142016929 - L1MB2 LINE L1 -2 6169 6083 2163 113 0 0 chr2 108670925 108671217 -142016637 - AluSp SINE Alu -21 292 1 7996 202 35 35 chr2 108671217 108673079 -142014775 - L1MB2 LINE L1 -88 6083 4222 207 0 0 0 chr2 108673079 108673102 -142014752 + (TG)n Simple_repeat Simple_repeat 1 23 0 7996 202 35 35 chr2 108673102 108673314 -142014540 - L1MB2 LINE L1 -1949 4222 4011 1864 146 65 42 chr2 108673314 108673670 -142014184 + THE1B LTR MaLR 1 364 0 7996 202 35 35 chr2 108673670 108674378 -142013476 - L1MB2 LINE L1 -2160 4011 3296 985 259 60 0 chr2 108674373 108674725 -142013129 - L1MB2 LINE L1 -3113 3033 2661 * 553 142 170 3 chr2 108674751 108674882 -142012972 - L1MD2 LINE L1 -5311 1649 1466 299 148 4 9 chr2 108674894 108674969 -142012885 - L1M4 LINE L1 -842 5304 5231 21 0 0 0 chr2 108674979 108675000 -142012854 + AT_rich Low_complexity Low_complexity 1 21 0 602 274 111 66 chr2 108675631 108675935 -142011919 - L1MD2 LINE L1 -6127 830 504 1990 148 3 3 chr2 108675935 108676233 -142011621 - AluSx SINE Alu -14 298 1 602 274 111 66 chr2 108676233 108676308 -142011546 - L1MD2 LINE L1 -6453 504 434 547 333 163 30 chr2 108676707 108677313 -142010541 + L2 LINE L2 2027 2713 -601 195 293 9 112 chr2 108679040 108679156 -142008698 - MIR3 SINE MIR -30 178 75 284 0 28 0 chr2 108679728 108679764 -142008090 + (TAGA)n Simple_repeat Simple_repeat 2 38 0 259 325 191 10 chr2 108679971 108680165 -142007689 - MIR SINE MIR -12 250 22 257 315 73 25 chr2 108681335 108681886 -142005968 - L1ME LINE L1 -333 5837 5255 234 312 13 0 chr2 108682120 108682197 -142005657 + LTR67 LTR ERVL 93 170 -387 2294 93 0 0 chr2 108682471 108682760 -142005094 - AluSc SINE Alu -17 292 4 217 277 0 0 chr2 108682888 108682935 -142004919 + polypyrimidine Low_complexity Low_complexity 4 50 0 23 0 0 0 chr2 108683227 108683250 -142004604 + AT_rich Low_complexity Low_complexity 1 23 0 539 260 40 17 chr2 108683412 108683585 -142004269 + MIR SINE MIR 74 250 -12 1520 157 10 10 chr2 108683617 108683910 -142003944 + L1MA4 LINE L1 5836 6128 -172 458 203 14 109 chr2 108684056 108684194 -142003660 - FLAM_A SINE Alu -8 125 1 196 359 57 53 chr2 108684416 108684834 -142003020 + L2 LINE L2 2458 2877 -437 496 315 16 85 chr2 108684923 108685041 -142002813 + L2 LINE L2 2973 3098 -174 1235 191 113 30 chr2 108685041 108685376 -142002478 - MLT1A1 LTR MaLR -2 363 1 496 315 16 85 chr2 108685376 108685562 -142002292 + L2 LINE L2 3098 3256 -16 22 0 0 0 chr2 108687048 108687070 -142000784 + AT_rich Low_complexity Low_complexity 1 22 0 383 311 42 26 chr2 108687656 108687846 -142000008 + MIR3 SINE MIR 12 204 -4 348 318 95 58 chr2 108688774 108689133 -141998721 + L2 LINE L2 2932 3303 -10 201 74 0 0 chr2 108689380 108689407 -141998447 + (A)n Simple_repeat Simple_repeat 1 27 0 490 330 70 9 chr2 108689461 108689691 -141998163 - MIR SINE MIR -14 248 5 213 314 76 48 chr2 108689754 108689859 -141997995 - L2 LINE L2 -2 3311 3204 189 74 0 0 chr2 108690061 108690088 -141997766 + (CGAT)n Simple_repeat Simple_repeat 2 28 0 306 320 0 10 chr2 108690236 108690339 -141997515 + (TGGA)n Simple_repeat Simple_repeat 4 105 0 364 283 61 32 chr2 108690397 108690585 -141997269 + MIR SINE MIR 30 221 -41 216 200 0 0 chr2 108692905 108692960 -141994894 + CT-rich Low_complexity Low_complexity 1 55 0 3704 134 12 16 chr2 108694210 108694853 -141993001 - Tigger4(Zombi) DNA MER2_type 0 2731 2091 841 213 6 0 chr2 108694855 108695029 -141992825 - Tigger4(Zombi) DNA MER2_type -2556 175 1 2167 114 0 7 chr2 108696458 108696755 -141991099 - AluSx SINE Alu -17 295 1 24 0 0 0 chr2 108697107 108697131 -141990723 + AT_rich Low_complexity Low_complexity 1 24 0 200 194 0 0 chr2 108697616 108697652 -141990202 + (TG)n Simple_repeat Simple_repeat 1 36 0 197 220 0 68 chr2 108697764 108697823 -141990031 - L2 LINE L2 -8 3305 3251 581 201 67 0 chr2 108697946 108698095 -141989759 - L1MB4 LINE L1 -5 6175 6017 681 211 45 99 chr2 108698129 108698551 -141989303 - L1M4 LINE L1 -5311 1231 833 270 132 0 0 chr2 108698554 108698607 -141989247 + (GA)n Simple_repeat Simple_repeat 1 53 0 319 315 39 11 chr2 108699125 108699306 -141988548 - L1M4 LINE L1 -6282 260 75 295 266 95 105 chr2 108699471 108699658 -141988196 - MLT1J2 LTR MaLR -6 444 257 942 222 10 0 chr2 108699658 108699861 -141987993 + MER3 DNA MER1_type 1 205 -4 295 266 95 105 chr2 108699861 108700053 -141987801 - MLT1J2 LTR MaLR -193 257 69 189 338 0 15 chr2 108700148 108700216 -141987638 - MER5B DNA MER1_type -92 86 20 302 182 61 0 chr2 108700229 108700295 -141987559 + MIR SINE MIR 114 183 -79 1183 193 12 109 chr2 108700510 108700841 -141987013 - AluJo SINE Alu 0 302 4 572 333 89 4 chr2 108702290 108702515 -141985339 + MIR SINE MIR 19 262 0 402 141 82 0 chr2 108702691 108702776 -141985078 + MLT2C2 LTR ERVL 1 92 -372 1810 198 31 10 chr2 108702835 108703219 -141984635 + MLT2C2 LTR ERVL 1 392 -72 212 242 32 0 chr2 108703230 108703306 -141984548 + (TA)n Simple_repeat Simple_repeat 1 78 0 277 250 0 0 chr2 108703457 108703533 -141984321 + ERVL-C2 LTR ERVL 174 249 -5515 2371 104 0 0 chr2 108703536 108703844 -141984010 + AluY SINE Alu 1 308 -3 2110 273 42 14 chr2 108703884 108704955 -141982899 + ERVL-C2 LTR ERVL 266 1438 -4326 309 245 50 72 chr2 108705049 108705188 -141982666 + MIR3 SINE MIR 36 171 -37 950 189 133 11 chr2 108705414 108705700 -141982154 - MER33 DNA MER1_type 0 324 4 1628 173 40 10 chr2 108706922 108707222 -141980632 - AluJb SINE Alu -3 309 1 1647 186 35 24 chr2 108707832 108708170 -141979684 + MER2 DNA MER2_type 2 343 -1 246 128 0 0 chr2 108708287 108708326 -141979528 + (A)n Simple_repeat Simple_repeat 1 39 0 547 213 90 130 chr2 108708328 108708760 -141979094 + MLT1D LTR MaLR 90 504 -1 2148 96 147 182 chr2 108709967 108710571 -141977283 + LTR12 LTR ERV1 1 583 -131 324 310 6 63 chr2 108712291 108712465 -141975389 - MIR3 SINE MIR -15 193 30 207 0 0 0 chr2 108712983 108713006 -141974848 + (CA)n Simple_repeat Simple_repeat 1 23 0 590 309 66 52 chr2 108713589 108714091 -141973763 + LTR33 LTR ERVL 13 521 0 2018 124 17 7 chr2 108715051 108715349 -141972505 + AluSx SINE Alu 5 305 -7 2016 83 0 35 chr2 108715640 108715966 -141971888 + AluY SINE Alu 1 316 0 258 32 0 0 chr2 108716142 108716173 -141971681 + (TG)n Simple_repeat Simple_repeat 1 31 0 522 85 37 0 chr2 108716182 108716264 -141971590 - L1M2 LINE L1 -519 5772 5688 3923 134 46 26 chr2 108716264 108717205 -141970649 + pTR5 LTR ERV1 745 2021 -417 275 265 10 0 chr2 108717209 108717307 -141970547 + LTR30 LTR ERV1 544 642 -80 1336 97 5 23 chr2 108717310 108717527 -141970327 + pTR5 LTR ERV1 172 384 -2054 2078 149 16 2 chr2 108717527 108717904 -141969950 - L1M2 LINE L1 -611 5701 5323 238 313 13 48 chr2 108718947 108719340 -141968514 - HAL1b LINE L1 -48 1300 947 562 201 14 51 chr2 108719423 108719637 -141968217 - Charlie1a DNA MER1_type -1 1454 1249 336 150 0 0 chr2 108719639 108719719 -141968135 + (TA)n Simple_repeat Simple_repeat 2 81 0 305 301 0 21 chr2 108719719 108719812 -141968042 - L1MC4 LINE L1 -1339 6703 6613 4140 212 52 43 chr2 108719829 108720375 -141967479 - Charlie1a DNA MER1_type -1445 1316 777 2487 115 6 11 chr2 108720375 108720741 -141967113 - THE1B LTR MaLR 0 364 1 4140 212 52 43 chr2 108720741 108721225 -141966629 - Charlie1a DNA MER1_type -1984 777 269 1330 189 29 25 chr2 108721225 108721505 -141966349 - AluJo SINE Alu -31 281 1 4140 212 52 43 chr2 108721505 108721777 -141966077 - Charlie1a DNA MER1_type -2492 269 1 591 188 0 0 chr2 108722292 108722388 -141965466 - FLAM_A SINE Alu -33 109 14 547 267 47 23 chr2 108722933 108723105 -141964749 - MER69A DNA AcHobo 0 177 2 937 226 35 89 chr2 108724050 108724467 -141963387 + MLT2D LTR ERVL 3 498 -22 498 130 16 49 chr2 108724468 108724591 -141963263 + (TCTCTG)n Simple_repeat Simple_repeat 2 120 0 304 114 0 86 chr2 108724591 108724661 -141963193 + MLT2C2 LTR ERVL 407 462 -2 2492 75 0 0 chr2 108724833 108725141 -141962713 + AluY SINE Alu 1 308 -3 234 0 0 0 chr2 108727000 108727026 -141960828 + (CA)n Simple_repeat Simple_repeat 2 27 0 280 289 40 0 chr2 108727766 108727842 -141960012 + MIR SINE MIR 107 185 -77 21 0 0 0 chr2 108728820 108728841 -141959013 + AT_rich Low_complexity Low_complexity 1 21 0 265 211 33 67 chr2 108729026 108729116 -141958738 + L1ME LINE L1 5655 5741 -421 32 26 0 0 chr2 108729210 108729249 -141958605 + AT_rich Low_complexity Low_complexity 1 39 0 265 289 85 35 chr2 108729364 108729565 -141958289 + MLT1J2 LTR MaLR 91 301 -149 714 257 11 6 chr2 108730040 108730223 -141957631 + MLT1A1 LTR MaLR 148 331 -34 652 160 29 150 chr2 108730225 108730362 -141957492 - MLT1A2 LTR MaLR -121 269 117 2178 106 7 0 chr2 108730362 108730645 -141957209 + AluSx SINE Alu 1 285 -27 652 160 29 150 chr2 108730645 108730665 -141957189 - MLT1A2 LTR MaLR -273 117 96 216 0 0 0 chr2 108730665 108730689 -141957165 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 652 160 29 150 chr2 108730689 108730823 -141957031 - MLT1A2 LTR MaLR -294 96 4 3145 263 38 42 chr2 108731113 108732312 -141955542 - L1MC4a LINE L1 -7 7801 6607 518 0 16 0 chr2 108732383 108732445 -141955409 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 1444 257 99 30 chr2 108732446 108733141 -141954713 - L1MC4a LINE L1 -1707 6101 5355 207 100 0 0 chr2 108733141 108733171 -141954683 + (TG)n Simple_repeat Simple_repeat 1 30 0 215 250 36 0 chr2 108733257 108733313 -141954541 - L2 LINE L2 0 3272 3215 2393 55 14 10 chr2 108733373 108733666 -141954188 + AluSp SINE Alu 12 305 -8 2788 207 26 17 chr2 108733685 108734337 -141953517 - L1MD1 LINE L1 -14 6228 5571 3485 234 50 40 chr2 108734588 108736071 -141951783 - L1MD1 LINE L1 -13 6229 4719 1828 170 28 0 chr2 108736071 108736353 -141951501 + AluSx SINE Alu 7 296 -16 3485 234 50 40 chr2 108736353 108736955 -141950899 - L1MD1 LINE L1 -1523 4719 4124 464 256 75 6 chr2 108736975 108737135 -141950719 - L1MD1 LINE L1 -2534 3612 3442 674 239 40 17 chr2 108737422 108737598 -141950256 + MIR SINE MIR 45 224 -38 1760 244 68 27 chr2 108737599 108738332 -141949522 - L1MD1 LINE L1 -1209 4937 4175 230 219 16 0 chr2 108738349 108738413 -141949441 + CT-rich Low_complexity Low_complexity 1 65 0 359 276 110 0 chr2 108738447 108738592 -141949262 - L1MD1 LINE L1 -1986 4160 4000 3751 49 6 16 chr2 108738622 108739109 -141948745 - L1PA7 LINE L1 -1 6153 5672 423 313 66 18 chr2 108739122 108739596 -141948258 - L1ME3A LINE L1 -281 5889 5363 222 118 15 59 chr2 108739737 108739805 -141948049 + (TCTCTG)n Simple_repeat Simple_repeat 6 70 0 273 89 0 0 chr2 108739805 108739850 -141948004 + (CA)n Simple_repeat Simple_repeat 1 45 0 645 291 47 111 chr2 108740153 108740498 -141947356 - L1ME3A LINE L1 -1313 4833 4467 483 0 45 0 chr2 108740498 108740565 -141947289 + (TA)n Simple_repeat Simple_repeat 2 71 0 2215 97 7 13 chr2 108740565 108740865 -141946989 - AluSx SINE Alu -14 298 1 645 291 47 111 chr2 108740865 108741095 -141946759 - L1ME3A LINE L1 -1678 4468 4315 207 0 0 0 chr2 108741095 108741118 -141946736 + (TA)n Simple_repeat Simple_repeat 2 24 0 645 291 47 111 chr2 108741118 108741304 -141946550 - L1ME3A LINE L1 -1831 4315 4119 1379 231 19 29 chr2 108741624 108742000 -141945854 - MLT1A2 LTR MaLR 0 374 3 476 365 5 20 chr2 108742726 108742923 -141944931 + MIR SINE MIR 41 234 -28 185 365 0 0 chr2 108744689 108744752 -141943102 - L2 LINE L2 -103 3169 3107 3655 150 45 20 chr2 108744791 108745538 -141942316 - LTR1B LTR ERV1 0 785 1 263 349 35 61 chr2 108745560 108745758 -141942096 - L2 LINE L2 -210 3062 2870 656 335 13 18 chr2 108745946 108746173 -141941681 + MIR SINE MIR 5 230 -32 189 341 100 35 chr2 108746259 108746429 -141941425 - L2 LINE L2 -739 2575 2395 261 0 0 0 chr2 108747342 108747371 -141940483 + (CA)n Simple_repeat Simple_repeat 2 30 0 357 196 157 89 chr2 108747760 108748040 -141939814 + L1ME4a LINE L1 5793 6091 -30 838 279 67 48 chr2 108748150 108748691 -141939163 + L1MC4 LINE L1 7347 7897 -145 222 302 0 0 chr2 108748693 108748746 -141939108 + polypurine Low_complexity Low_complexity 4 56 0 2034 117 4 0 chr2 108748823 108749124 -141938730 + AluSx SINE Alu 1 302 0 1171 253 68 37 chr2 108749277 108749732 -141938122 + L1ME3 LINE L1 5682 6150 -12 228 269 26 51 chr2 108749764 108749842 -141938012 + L2 LINE L2 3197 3272 0 284 48 24 0 chr2 108751825 108751867 -141935987 + (TCTCC)n Simple_repeat Simple_repeat 5 47 0 2289 105 3 0 chr2 108752065 108752360 -141935494 + AluSx SINE Alu 1 296 -16 351 224 0 0 chr2 108752806 108752897 -141934957 - L1 LINE L1 -3427 2719 2629 202 250 0 0 chr2 108752926 108752966 -141934888 + (CATA)n Simple_repeat Simple_repeat 1 40 0 1407 243 65 25 chr2 108753753 108754342 -141933512 - L1MDa LINE L1 -3261 3383 2772 * 2315 251 104 31 chr2 108754341 108755255 -141932599 - L1M4 LINE L1 -5557 985 5 310 224 89 51 chr2 108755276 108755513 -141932341 - L1MDa LINE L1 -4620 2024 1779 772 274 40 99 chr2 108755648 108756647 -141931207 - L1MDa LINE L1 -5090 1544 605 1543 169 27 7 chr2 108756661 108756957 -141930897 - MER74A LTR ERVL -256 302 1 1793 166 0 0 chr2 108757659 108757936 -141929918 + AluJb SINE Alu 1 277 -35 225 65 0 0 chr2 108757959 108757990 -141929864 + (GA)n Simple_repeat Simple_repeat 2 32 0 546 135 0 58 chr2 108758010 108758286 -141929568 + (TA)n Simple_repeat Simple_repeat 1 259 0 396 109 6 79 chr2 108758300 108758465 -141929389 + (TA)n Simple_repeat Simple_repeat 2 154 0 303 269 0 43 chr2 108758466 108758559 -141929295 + L1MC4 LINE L1 6615 6703 -1339 249 196 0 0 chr2 108758560 108758611 -141929243 + (TATATG)n Simple_repeat Simple_repeat 5 55 0 355 305 62 0 chr2 108758614 108758742 -141929112 + L1MC4 LINE L1 6584 6719 -1323 860 144 0 0 chr2 108758746 108758871 -141928983 - AluJb SINE Alu -187 125 1 26 30 0 0 chr2 108759043 108759076 -141928778 + AT_rich Low_complexity Low_complexity 1 33 0 2208 105 0 3 chr2 108759402 108759743 -141928111 + AluSq SINE Alu 1 313 0 1875 117 59 14 chr2 108759743 108760033 -141927821 + AluSc SINE Alu 1 303 -6 383 358 39 18 chr2 108761387 108761616 -141926238 + MIR SINE MIR 8 241 -21 239 283 22 11 chr2 108761786 108761878 -141925976 - L1P LINE L1 -1550 4596 4504 330 370 57 31 chr2 108761976 108762327 -141925527 - L1MEc LINE L1 -3206 2923 2564 303 240 30 30 chr2 108762465 108762565 -141925289 - L1MEc LINE L1 -3773 2356 2257 247 330 20 26 chr2 108763013 108763316 -141924538 - L1MEc LINE L1 -4584 1726 1426 259 275 72 37 chr2 108763386 108763790 -141924064 - L1MEc LINE L1 -4885 1234 817 2023 119 7 10 chr2 108763807 108764102 -141923752 + AluSq SINE Alu 5 298 -15 457 342 74 67 chr2 108764104 108764674 -141923180 - L1MEc LINE L1 -5317 802 229 1472 198 43 40 chr2 108765323 108765697 -141922157 - MLT1B LTR MaLR -13 377 3 760 251 75 63 chr2 108767723 108768216 -141919638 + MER34 LTR ERV1 38 536 -6 370 238 252 21 chr2 108768346 108768489 -141919365 - MIR SINE MIR -6 256 81 341 184 37 15 chr2 108769939 108770075 -141917779 + (TG)n Simple_repeat Simple_repeat 1 139 0 324 224 40 24 chr2 108770087 108770212 -141917642 + (TG)n Simple_repeat Simple_repeat 2 128 0 258 183 17 35 chr2 108770225 108770340 -141917514 + (TG)n Simple_repeat Simple_repeat 1 113 0 2192 107 0 3 chr2 108770564 108770862 -141916992 + AluSc SINE Alu 4 300 -9 1704 113 113 0 chr2 108771537 108771793 -141916061 - AluSg SINE Alu -6 304 20 226 211 0 0 chr2 108772419 108772457 -141915397 + AluJ/monomer SINE Alu 1 38 -264 444 273 123 107 chr2 108773032 108775617 -141912237 + L1M2 LINE L1 368 1391 -5458 2333 113 0 0 chr2 108775957 108776268 -141911586 + AluSx SINE Alu 2 312 0 186 283 106 26 chr2 108776452 108776565 -141911289 + L2 LINE L2 2200 2321 -993 1363 213 29 14 chr2 108777530 108777877 -141909977 + MLT1A1 LTR MaLR 10 361 -4 197 284 34 34 chr2 108778226 108778314 -141909540 - MIR3 SINE MIR -9 199 112 659 202 0 8 chr2 108778799 108778928 -141908926 - FLAM_C SINE Alu -5 128 1 2662 20 7 0 chr2 108779965 108780270 -141907584 - AluYa5 SINE Alu -4 307 1 314 107 18 0 chr2 108780363 108780419 -141907435 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 186 43 0 0 chr2 108780433 108780456 -141907398 + (CA)n Simple_repeat Simple_repeat 2 24 0 982 127 7 0 chr2 108780597 108780739 -141907115 + AluSg/x SINE Alu 164 306 -6 23 0 0 0 chr2 108780742 108780765 -141907089 + AT_rich Low_complexity Low_complexity 1 23 0 1748 176 0 0 chr2 108780768 108781063 -141906791 + AluJb SINE Alu 2 296 -16 693 214 0 0 chr2 108781065 108781191 -141906663 + FLAM_C SINE Alu 2 127 -16 40 37 0 0 chr2 108781191 108781245 -141906609 + AT_rich Low_complexity Low_complexity 1 54 0 216 179 15 30 chr2 108783102 108783169 -141904685 + (TAA)n Simple_repeat Simple_repeat 1 66 0 1950 161 9 18 chr2 108784172 108784508 -141903346 - MER7A DNA MER2_type 0 346 16 611 233 0 0 chr2 108786031 108786160 -141901694 - L1PB4 LINE L1 -2 6154 6026 279 0 0 0 chr2 108786160 108786191 -141901663 + (CA)n Simple_repeat Simple_repeat 1 31 0 243 0 0 0 chr2 108786190 108786217 -141901637 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 1270 229 102 0 chr2 108786315 108786630 -141901224 + MER7A DNA MER2_type 2 346 0 2440 59 0 10 chr2 108787057 108787360 -141900494 - AluY SINE Alu -11 300 1 24 53 0 0 chr2 108787887 108787925 -141899929 + AT_rich Low_complexity Low_complexity 1 38 0 856 223 187 0 chr2 108789612 108789885 -141897969 + MER33 DNA MER1_type 1 324 0 201 290 0 29 chr2 108790032 108790101 -141897753 + (TATG)n Simple_repeat Simple_repeat 3 69 0 23 0 0 0 chr2 108791797 108791820 -141896034 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 108793176 108793200 -141894654 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 108793993 108794021 -141893833 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 108794286 108794309 -141893545 + (TTG)n Simple_repeat Simple_repeat 2 24 0 182 91 30 0 chr2 108794421 108794454 -141893400 + T-rich Low_complexity Low_complexity 2 35 0 210 250 12 36 chr2 108794958 108795042 -141892812 + (CGGGG)n Simple_repeat Simple_repeat 3 84 0 262 284 18 0 chr2 108795882 108795991 -141891863 + (TA)n Simple_repeat Simple_repeat 2 112 0 264 59 0 0 chr2 108796555 108796589 -141891265 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 357 322 63 7 chr2 108797302 108797445 -141890409 - L2 LINE L2 0 3313 3163 2155 102 0 0 chr2 108797606 108797912 -141889942 + AluSx SINE Alu 1 306 0 182 263 0 0 chr2 108798004 108798042 -141889812 + MER5A DNA MER1_type 10 47 -142 267 317 44 55 chr2 108798263 108798446 -141889408 - MER5A DNA MER1_type 0 189 9 1514 209 36 0 chr2 108798613 108798914 -141888940 - MER2 DNA MER2_type 0 345 34 354 324 73 93 chr2 108799431 108799690 -141888164 + L2 LINE L2 2989 3242 -30 237 261 87 0 chr2 108799859 108799928 -141887926 - MIR SINE MIR -100 108 34 27 73 0 0 chr2 108800008 108800063 -141887791 + AT_rich Low_complexity Low_complexity 1 55 0 252 0 0 0 chr2 108800745 108800773 -141887081 + (TA)n Simple_repeat Simple_repeat 1 28 0 990 272 96 34 chr2 108800780 108801781 -141886073 - L1ME2 LINE L1 -10 6088 4899 783 247 89 27 chr2 108801797 108802030 -141885824 - L1ME2 LINE L1 -5079 991 841 6661 84 0 1 chr2 108802030 108803461 -141884393 - L1PA7 LINE L1 0 6154 4724 783 247 89 27 chr2 108803461 108803728 -141884126 - L1ME2 LINE L1 -5229 841 592 1778 221 41 2 chr2 108803817 108804211 -141883643 - L1MB5 LINE L1 -8 6166 5758 790 219 32 41 chr2 108804263 108804482 -141883372 - L1M4c LINE L1 -3891 2493 2277 216 0 0 0 chr2 108804492 108804516 -141883338 + (TG)n Simple_repeat Simple_repeat 1 24 0 414 260 87 7 chr2 108804530 108804680 -141883174 + MLT1B LTR MaLR 1 162 -228 668 281 99 0 chr2 108804680 108804901 -141882953 + MLT1-int LTR MaLR 490 732 -639 1625 260 48 49 chr2 108805041 108806463 -141881391 - L1M4 LINE L1 -3094 3550 831 2084 245 84 21 chr2 108806693 108807690 -141880164 - L1ME LINE L1 -3171 3211 2128 1245 108 65 0 chr2 108807690 108807875 -141879979 + MER107 DNA MER1_type 1 197 0 2084 245 84 21 chr2 108807875 108808077 -141879777 - L1ME LINE L1 -4254 2128 1940 1337 280 37 42 chr2 108808254 108808772 -141879082 - L1ME LINE L1 -5529 843 329 13033 22 1 0 chr2 108810536 108812841 -141875013 - L1PA3 LINE L1 0 6155 3850 7396 28 1 1 chr2 108812836 108814480 -141873374 + L1PA3 LINE L1 4511 6155 0 * 26 0 0 0 chr2 108814484 108814510 -141873344 + AT_rich Low_complexity Low_complexity 1 26 0 1536 247 25 25 chr2 108814510 108815076 -141872778 - L1M4 LINE L1 -2742 3404 2839 * 2033 191 118 154 chr2 108815047 108815501 -141872353 - L1MC3 LINE L1 -174 7611 7142 255 268 31 21 chr2 108815501 108815598 -141872256 - MLT1F1 LTR MaLR -434 133 36 2033 191 118 154 chr2 108815598 108816086 -141871768 - L1MC3 LINE L1 -643 7142 6610 22 0 0 0 chr2 108816159 108816181 -141871673 + AT_rich Low_complexity Low_complexity 1 22 0 744 228 10 10 chr2 108816282 108816595 -141871259 - L1MC4 LINE L1 -1164 6621 6351 201 175 0 25 chr2 108817904 108817944 -141869910 - L2 LINE L2 -9 3304 3266 449 62 15 0 chr2 108818172 108818237 -141869617 + (TA)n Simple_repeat Simple_repeat 2 67 0 431 296 40 80 chr2 108821067 108821111 -141866743 - MIR SINE MIR -51 211 167 2150 159 48 17 chr2 108821111 108821526 -141866328 + MSTA LTR MaLR 1 428 0 431 296 40 80 chr2 108821526 108821680 -141866174 - MIR SINE MIR -95 167 21 24 0 0 0 chr2 108823024 108823048 -141864806 + AT_rich Low_complexity Low_complexity 1 24 0 2990 224 58 32 chr2 108824175 108825334 -141862520 - L1ME LINE L1 -620 6357 5170 1828 257 54 30 chr2 108825323 108826123 -141861731 - L1ME LINE L1 -4831 2024 1284 * 226 289 33 46 chr2 108826749 108826901 -141860953 - L1ME LINE L1 -6618 241 92 2191 163 30 76 chr2 108826966 108827493 -141860361 - L1MB8 LINE L1 -1 6177 5675 377 174 0 76 chr2 108827485 108827577 -141860277 - L1M3 LINE L1 -434 5746 5662 * 598 248 0 7 chr2 108827650 108827791 -141860063 + LTR33 LTR ERVL 352 491 -30 1328 160 19 102 chr2 108828079 108828404 -141859450 - L1MA9 LINE L1 -5 6307 6010 3285 100 13 0 chr2 108828877 108829355 -141858499 - LTR19A LTR ERV1 -2 484 1 28 0 0 0 chr2 108829662 108829690 -141858164 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr2 108829767 108829788 -141858066 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 252 0 0 0 chr2 108829787 108829815 -141858039 + (GA)n Simple_repeat Simple_repeat 2 29 0 23 0 0 0 chr2 108829818 108829841 -141858013 + AT_rich Low_complexity Low_complexity 1 23 0 3607 177 13 0 chr2 108830271 108830954 -141856900 - L1PB4 LINE L1 -2 6154 5463 978 217 75 99 chr2 108831744 108832118 -141855736 + MLT1A1 LTR MaLR 1 365 0 201 39 0 0 chr2 108832260 108832286 -141855568 + (CA)n Simple_repeat Simple_repeat 1 26 0 2058 183 0 3 chr2 108832418 108832784 -141855070 + MLT1A1 LTR MaLR 1 365 0 2803 151 14 6 chr2 108832996 108833498 -141854356 + MER9 LTR ERVK 1 506 -5 246 253 172 0 chr2 108833647 108833734 -141854120 - L2 LINE L2 -35 3237 3136 197 180 0 80 chr2 108833784 108833834 -141854020 - L2 LINE L2 0 3313 3268 242 324 90 0 chr2 108834439 108834550 -141853304 + L2 LINE L2 3178 3298 -15 1469 183 103 26 chr2 108834774 108835113 -141852741 - MLT1A1 LTR MaLR 0 365 1 1041 105 0 0 chr2 108835605 108835738 -141852116 - AluSq/x SINE Alu -180 133 1 391 263 62 78 chr2 108835839 108836018 -141851836 - MER5B DNA MER1_type 0 178 3 366 42 0 0 chr2 108836688 108836736 -141851118 + (TG)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr2 108837980 108838001 -141849853 + AT_rich Low_complexity Low_complexity 1 21 0 223 111 0 44 chr2 108838468 108838513 -141849341 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 3217 83 7 15 chr2 108838549 108839008 -141848846 - L1PA8A LINE L1 0 6131 5677 22 0 0 0 chr2 108840158 108840180 -141847674 + AT_rich Low_complexity Low_complexity 1 22 0 264 59 0 0 chr2 108841383 108841417 -141846437 + (TG)n Simple_repeat Simple_repeat 2 35 0 24 53 0 0 chr2 108843179 108843217 -141844637 + AT_rich Low_complexity Low_complexity 1 38 0 243 108 27 0 chr2 108843708 108843745 -141844109 - tRNA-Lys-AAG tRNA tRNA -37 39 2 1086 0 0 0 chr2 108844774 108844902 -141842952 - L1HS LINE L1 0 6155 6028 318 266 21 91 chr2 108844997 108845140 -141842714 + MIR SINE MIR 11 143 -119 23 78 0 0 chr2 108846227 108846278 -141841576 + AT_rich Low_complexity Low_complexity 1 51 0 271 372 55 6 chr2 108846506 108846670 -141841184 + MIR3 SINE MIR 33 204 -4 417 174 165 52 chr2 108847217 108847332 -141840522 + FRAM SINE Alu 30 157 -19 672 265 48 12 chr2 108847610 108847776 -141840078 + MER5B DNA MER1_type 1 172 -6 587 227 45 28 chr2 108848108 108848284 -141839570 + L1MC5 LINE L1 6693 6871 -1090 2081 253 24 20 chr2 108848410 108849170 -141838684 + L1MDb LINE L1 660 1422 -4987 244 188 0 31 chr2 108849199 108849263 -141838591 + MADE1 DNA Mariner 1 62 -18 248 235 73 0 chr2 108849263 108849331 -141838523 + L1MDb LINE L1 1456 1528 -4878 648 235 22 16 chr2 108849338 108849521 -141838333 + L1MDb LINE L1 1630 1813 -4593 677 226 35 75 chr2 108849530 108849731 -141838123 + L1MDb LINE L1 2004 2189 -4217 1535 176 3 27 chr2 108849731 108850032 -141837822 - AluJo SINE Alu -3 309 16 677 226 35 75 chr2 108850032 108850149 -141837705 + L1MDb LINE L1 2189 2309 -4097 386 169 0 13 chr2 108850223 108850300 -141837554 + L1MD2 LINE L1 6057 6132 -227 1198 303 19 9 chr2 108850358 108850777 -141837077 - LTR68 LTR ERV1 -133 607 185 384 322 28 22 chr2 108850781 108850961 -141836893 - HERV16 LTR ERVL -3449 1547 1367 816 246 10 5 chr2 108851109 108851312 -141836542 - HERV16 LTR ERVL -3811 1185 982 317 350 29 29 chr2 108851474 108851883 -141835971 + HERVL LTR ERVL 4930 5338 -316 183 303 48 76 chr2 108851993 108852138 -141835716 - L3 LINE CR1 -96 1481 1341 21 0 0 0 chr2 108852140 108852161 -141835693 + AT_rich Low_complexity Low_complexity 1 21 0 440 192 1 1 chr2 108855221 108855319 -141832535 + L1MB1 LINE L1 5821 5918 -246 21 0 0 0 chr2 108855685 108855706 -141832148 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr2 108857245 108857280 -141830574 + AT_rich Low_complexity Low_complexity 1 35 0 649 181 15 23 chr2 108857296 108857429 -141830425 - FLAM_C SINE Alu 0 143 12 2237 89 3 17 chr2 108857545 108857847 -141830007 + AluSc SINE Alu 1 298 -11 24 0 0 0 chr2 108858192 108858216 -141829638 + AT_rich Low_complexity Low_complexity 1 24 0 394 165 299 0 chr2 108858226 108858323 -141829531 - MER2 DNA MER2_type -219 126 1 365 253 60 29 chr2 108859872 108860068 -141827786 + L1MB8 LINE L1 5895 6098 -80 799 156 179 6 chr2 108860244 108860423 -141827431 + MER2 DNA MER2_type 1 210 -135 27 0 0 0 chr2 108861174 108861201 -141826653 + AT_rich Low_complexity Low_complexity 1 27 0 231 167 0 0 chr2 108862399 108862441 -141825413 + (CA)n Simple_repeat Simple_repeat 2 43 0 241 370 92 35 chr2 108863027 108863311 -141824543 - L2 LINE L2 -2657 657 358 6777 139 104 62 chr2 108864151 108865769 -141822085 + pTR5 LTR ERV1 742 2428 -10 283 325 160 5 chr2 108866472 108866660 -141821194 - MIR SINE MIR -3 259 43 293 98 49 0 chr2 108867661 108867722 -141820132 + T-rich Low_complexity Low_complexity 2 65 0 298 326 234 0 chr2 108868296 108868437 -141819417 + MER5A DNA MER1_type 8 181 -8 266 297 11 33 chr2 108868453 108868544 -141819310 - MER5B DNA MER1_type 0 178 90 4754 122 17 0 chr2 108868724 108869493 -141818361 - L1PA12 LINE L1 0 6168 5387 8020 158 2 3 chr2 108869516 108870965 -141816889 - L1PA12 LINE L1 -877 5269 3822 4956 172 15 23 chr2 108870966 108871859 -141815995 + L1P LINE L1 2780 3665 -2481 456 19 0 0 chr2 108871859 108871912 -141815942 + (CA)n Simple_repeat Simple_repeat 2 54 0 4956 172 15 23 chr2 108871912 108872080 -141815774 + L1P LINE L1 3665 3833 -2313 412 269 54 12 chr2 108873100 108873267 -141814587 + LTR33A LTR ERVL 347 520 -3 225 319 0 44 chr2 108873271 108873362 -141814492 + L2 LINE L2 3186 3272 0 706 249 29 29 chr2 108873607 108873914 -141813940 + L1MDa LINE L1 1685 1994 -4546 482 225 100 17 chr2 108873914 108874034 -141813820 + FLAM_A SINE Alu 1 130 -3 706 249 29 29 chr2 108874034 108874071 -141813783 + L1MDa LINE L1 1993 2029 -4511 2178 138 16 30 chr2 108874071 108874440 -141813414 + THE1B LTR MaLR 1 364 0 4947 149 32 57 chr2 108874453 108875835 -141812019 + THE1B-int LTR MaLR 342 1651 0 2018 134 42 25 chr2 108875835 108876193 -141811661 + THE1B LTR MaLR 1 364 0 427 297 52 26 chr2 108876218 108876964 -141810890 + L1MDa LINE L1 2056 2828 -3712 * 1061 276 75 18 chr2 108876957 108877518 -141810336 + L1MDa LINE L1 4234 4826 -1714 4413 150 4 4 chr2 108877522 108878280 -141809574 - HSMAR2 DNA Mariner 0 1302 545 2376 183 47 30 chr2 108878415 108878951 -141808903 - HSMAR2 DNA Mariner -757 545 1 879 243 140 16 chr2 108878956 108879393 -141808461 + L1MDa LINE L1 4834 5324 -1216 334 319 29 36 chr2 108879403 108879541 -141808313 + L1ME1 LINE L1 6009 6145 -21 26 74 0 0 chr2 108879771 108879825 -141808029 + AT_rich Low_complexity Low_complexity 1 54 0 390 231 104 8 chr2 108879859 108879993 -141807861 - LTR33 LTR ERVL 0 521 375 1560 311 52 30 chr2 108880165 108880294 -141807560 - ERVL LTR ERVL -443 5321 5196 222 62 0 0 chr2 108880294 108880326 -141807528 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1560 311 52 30 chr2 108880326 108881099 -141806755 - ERVL LTR ERVL -568 5196 4399 323 323 0 0 chr2 108883153 108883277 -141804577 + A-rich Low_complexity Low_complexity 1 124 0 303 267 78 11 chr2 108883777 108883867 -141803987 - L2 LINE L2 -8 3305 3210 195 308 93 37 chr2 108887081 108887188 -141800666 - L2 LINE L2 -21 3251 3139 743 241 160 11 chr2 108887302 108887584 -141800270 + MER5C DNA MER1_type 1 324 0 408 356 40 0 chr2 108887783 108887932 -141799922 - MIR SINE MIR -24 238 84 686 186 8 0 chr2 108889172 108889290 -141798564 - FLAM_A SINE Alu -14 119 1 620 230 5 84 chr2 108890185 108890376 -141797478 + MER5B DNA MER1_type 1 176 -2 886 211 16 5 chr2 108892070 108892255 -141795599 + MER5A DNA MER1_type 1 187 -2 438 326 55 0 chr2 108893603 108893784 -141794070 + MIR SINE MIR 40 230 -32 180 236 18 36 chr2 108894009 108894064 -141793790 - L3 LINE CR1 -4 1573 1520 279 288 0 0 chr2 108894815 108894881 -141792973 + MER5B DNA MER1_type 1 66 -112 1698 286 82 19 chr2 108894898 108896108 -141791746 + L1M4 LINE L1 2757 4078 -2068 2289 31 0 0 chr2 108896185 108896476 -141791378 - L1PA5 LINE L1 -996 5150 4860 7456 30 7 1 chr2 108896476 108897463 -141790391 + L1PA5 LINE L1 5152 6143 -11 39 22 0 0 chr2 108897463 108897509 -141790345 + AT_rich Low_complexity Low_complexity 1 46 0 279 0 0 0 chr2 108898428 108898459 -141789395 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 306 0 0 0 chr2 108898458 108898492 -141789362 + (GA)n Simple_repeat Simple_repeat 2 35 0 1426 142 43 14 chr2 108898989 108899271 -141788583 + L1MA8 LINE L1 5999 6288 -3 328 296 0 0 chr2 108900888 108900976 -141786878 + MER81 DNA DNA 1 88 -26 263 274 21 42 chr2 108901121 108901216 -141786638 + MIR3 SINE MIR 99 191 -17 244 306 78 78 chr2 108901385 108901627 -141786227 - MIR SINE MIR 0 262 21 * 553 293 78 24 chr2 108901574 108901779 -141786075 + MIR SINE MIR 16 231 -31 180 346 0 0 chr2 108901881 108901933 -141785921 + MIR SINE MIR 43 94 -114 237 282 82 0 chr2 108902385 108902470 -141785384 + L1ME LINE L1 5604 5695 -426 668 273 39 69 chr2 108903332 108903826 -141784028 - Charlie7 DNA MER1_type -1923 689 211 244 321 25 0 chr2 108904027 108904108 -141783746 + L2 LINE L2 3190 3272 0 1536 180 14 21 chr2 108904146 108904430 -141783424 + AluJo SINE Alu 1 282 -30 335 148 45 0 chr2 108904526 108904614 -141783240 + (TA)n Simple_repeat Simple_repeat 1 92 0 28 0 0 0 chr2 108904705 108904733 -141783121 + AT_rich Low_complexity Low_complexity 1 28 0 609 290 6 6 chr2 108905176 108905338 -141782516 - MIR SINE MIR -93 169 8 2357 96 0 0 chr2 108905579 108905880 -141781974 - AluSg SINE Alu -9 301 1 22 35 0 0 chr2 108905911 108905940 -141781914 + AT_rich Low_complexity Low_complexity 1 29 0 262 289 19 29 chr2 108907405 108907509 -141780345 - LTR33 LTR ERVL -300 221 119 264 254 201 58 chr2 108908511 108908700 -141779154 - MIR SINE MIR -2 260 45 275 261 27 54 chr2 108909249 108909360 -141778494 + MIR SINE MIR 84 191 -71 332 301 8 16 chr2 108910223 108910346 -141777508 + MIR3 SINE MIR 86 207 -1 317 311 9 19 chr2 108911261 108911293 -141776561 - MER81 DNA DNA 0 114 83 7574 30 0 0 chr2 108911293 108912355 -141775499 - L1PA4 LINE L1 0 6155 5093 317 311 9 19 chr2 108912355 108912428 -141775426 - MER81 DNA DNA -31 83 10 377 238 48 0 chr2 108912429 108912513 -141775341 - MER81 DNA DNA -26 88 1 488 333 79 45 chr2 108912751 108913234 -141774620 - L2 LINE L2 -850 2464 1966 5653 96 24 7 chr2 108913501 108914378 -141773476 - L1PA13 LINE L1 0 6163 5272 1562 167 3 13 chr2 108914372 108914598 -141773256 + L1P LINE L1 4959 5183 -963 * 183 42 0 0 chr2 108914598 108914622 -141773232 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1562 167 3 13 chr2 108914622 108914713 -141773141 + L1P LINE L1 5183 5273 -873 2482 104 31 8 chr2 108914790 108915146 -141772708 + THE1B LTR MaLR 1 364 0 335 310 123 35 chr2 108915370 108915541 -141772313 - MIR3 SINE MIR -3 205 20 1673 277 96 32 chr2 108916963 108919185 -141768669 - L1MEc LINE L1 -2996 3219 897 255 369 42 32 chr2 108919485 108919889 -141767965 - L1MEc LINE L1 -5952 444 37 249 402 9 0 chr2 108920015 108920127 -141767727 + MIR3 SINE MIR 78 190 -18 10581 167 15 6 chr2 108920181 108920831 -141767023 - L1MA1 LINE L1 0 7721 7078 2763 71 8 0 chr2 108920831 108921183 -141766671 + THE1A LTR MaLR 1 355 0 11415 110 2 1 chr2 108921183 108922762 -141765092 + THE1A-int LTR MaLR 1 1580 0 2501 109 14 0 chr2 108922762 108923112 -141764742 + THE1A LTR MaLR 1 355 0 10581 167 15 6 chr2 108923112 108925651 -141762203 - L1MA1 LINE L1 -642 7079 4499 8903 199 75 18 chr2 108925657 108927531 -141760323 - L1MA1 LINE L1 -5571 1994 15 392 338 15 0 chr2 108927954 108928087 -141759767 - L2 LINE L2 0 3313 3179 6706 237 60 11 chr2 108928392 108931417 -141756437 + L1MB5 LINE L1 2699 5877 -297 2269 61 3 79 chr2 108931417 108931746 -141756108 + AluY SINE Alu 1 304 -7 6706 237 60 11 chr2 108931746 108932020 -141755834 + L1MB5 LINE L1 5877 6136 -38 1454 178 110 51 chr2 108934110 108934353 -141753501 - L1MA9 LINE L1 -38 6274 5994 2532 142 54 7 chr2 108934353 108934817 -141753037 - LTR19A LTR ERV1 0 486 1 1454 178 110 51 chr2 108934817 108935001 -141752853 - L1MA9 LINE L1 -318 5994 5822 594 338 48 0 chr2 108935239 108935446 -141752408 - MIR SINE MIR -22 240 24 30 27 0 0 chr2 108936280 108936317 -141751537 + AT_rich Low_complexity Low_complexity 1 37 0 1725 169 3 26 chr2 108936518 108936820 -141751034 + AluJb SINE Alu 1 295 -17 210 259 0 17 chr2 108936953 108937011 -141750843 + GA-rich Low_complexity Low_complexity 2 58 0 650 216 83 70 chr2 108937158 108937556 -141750298 + L1MC5 LINE L1 7524 7926 -35 2313 122 0 0 chr2 108937566 108937878 -141749976 + AluSq SINE Alu 1 312 -1 1905 160 0 0 chr2 108937878 108938171 -141749683 + AluSx SINE Alu 1 293 -19 643 323 85 26 chr2 108938470 108939036 -141748818 - ERVL LTR ERVL -1836 3928 3330 457 233 25 69 chr2 108942018 108942131 -141745723 - MLT1E LTR MaLR -132 461 355 6089 105 4 4 chr2 108942131 108943340 -141744514 - L1PA11 LINE L1 -2 6172 4943 457 233 25 69 chr2 108943340 108943385 -141744469 - MLT1E LTR MaLR -238 355 310 10427 216 29 45 chr2 108943386 108947210 -141740644 - L1PA12 LINE L1 -2715 4869 11 713 279 124 27 chr2 108947211 108947541 -141740313 - MLT1E LTR MaLR -231 362 1 667 299 29 21 chr2 108947970 108948211 -141739643 + MIR SINE MIR 19 261 -1 35 0 0 0 chr2 108948520 108948555 -141739299 + AT_rich Low_complexity Low_complexity 1 35 0 502 376 92 6 chr2 108949176 108949445 -141738409 - L3 LINE CR1 -72 1505 1202 2368 173 24 2 chr2 108949445 108949862 -141737992 - MSTB LTR MaLR 0 426 1 502 376 92 6 chr2 108949862 108949919 -141737935 - L3 LINE CR1 -375 1202 1151 472 289 87 10 chr2 108950012 108950220 -141737634 + MER90 LTR ERV1 143 366 -248 1136 169 17 10 chr2 108950220 108950476 -141737378 + L1MB8 LINE L1 5704 5926 -258 1090 177 8 28 chr2 108950588 108950755 -141737099 + L1MB8 LINE L1 5926 6088 -90 1943 222 126 6 chr2 108950755 108951254 -141736600 - MER89 LTR ERV1 0 559 1 1090 177 8 28 chr2 108951254 108951335 -141736519 + L1MB8 LINE L1 6088 6169 -9 451 304 50 6 chr2 108951365 108951546 -141736308 + MER90 LTR ERV1 369 557 -57 206 287 106 21 chr2 108951635 108951729 -141736125 - L3 LINE CR1 -510 1067 966 1800 145 8 78 chr2 108951849 108952221 -141735633 + MER7A DNA MER2_type 2 345 -1 213 139 0 0 chr2 108952222 108952265 -141735589 + (TG)n Simple_repeat Simple_repeat 2 44 0 968 283 51 65 chr2 108953062 108953313 -141734541 + L1ME LINE L1 20 273 -5797 2312 114 0 6 chr2 108953313 108953628 -141734226 - AluSq SINE Alu 0 313 1 968 283 51 65 chr2 108953628 108954193 -141733661 + L1ME LINE L1 273 825 -5245 361 275 134 43 chr2 108954196 108954687 -141733167 + L1ME LINE L1 926 1461 -4619 1166 242 6 53 chr2 108954703 108955059 -141732795 + L1M4 LINE L1 16 354 -6188 410 197 127 14 chr2 108955055 108955197 -141732657 + L1M4 LINE L1 764 921 -5621 * 2228 81 34 0 chr2 108955201 108955499 -141732355 + AluSg SINE Alu 1 308 -2 207 0 0 0 chr2 108955499 108955522 -141732332 + (TA)n Simple_repeat Simple_repeat 2 24 0 1599 184 38 50 chr2 108955622 108955720 -141732134 + L1M4 LINE L1 824 922 -5620 2231 83 33 0 chr2 108955720 108956020 -141731834 + AluSg SINE Alu 1 310 0 303 28 0 0 chr2 108956023 108956059 -141731795 + (TA)n Simple_repeat Simple_repeat 2 37 0 1599 184 38 50 chr2 108956059 108956434 -141731420 + L1M4 LINE L1 924 1295 -5247 913 231 29 33 chr2 108956539 108956846 -141731008 + L1M4 LINE L1 4317 4622 -2022 423 257 81 7 chr2 108956874 108957010 -141730844 - MER20 DNA MER1_type -73 146 1 565 246 85 55 chr2 108957021 108957387 -141730467 + L1M4 LINE L1 4656 5032 -1612 334 247 31 41 chr2 108957461 108957558 -141730296 + MIR SINE MIR 167 262 0 339 231 66 0 chr2 108959533 108959624 -141728230 - MIR SINE MIR -2 260 164 1749 158 6 31 chr2 108959626 108959943 -141727911 + AluJo SINE Alu 1 309 -3 6901 184 36 51 chr2 108960538 108962356 -141725498 + L1 LINE L1 2555 4345 -1801 225 0 0 0 chr2 108963074 108963099 -141724755 + (T)n Simple_repeat Simple_repeat 1 25 0 4709 177 50 29 chr2 108963100 108964317 -141723537 + MER109 Unknown Unknown 1 1415 -1017 1740 216 3 22 chr2 108964317 108964688 -141723166 - LTR10B LTR ERV1 0 547 184 2038 220 2 9 chr2 108964804 108965250 -141722604 - BaEV-int LTR ERV1 -10 6639 6197 737 199 0 7 chr2 108965600 108965736 -141722118 + MER2 DNA MER2_type 2 136 -209 22 35 0 0 chr2 108965736 108965765 -141722089 + AT_rich Low_complexity Low_complexity 1 29 0 1530 190 21 28 chr2 108965768 108966058 -141721796 - AluJo SINE Alu -24 288 1 1228 156 9 9 chr2 108966061 108966286 -141721568 + MER2 DNA MER2_type 121 345 0 2192 85 10 7 chr2 108967040 108967335 -141720519 - AluY SINE Alu -15 296 1 719 241 77 14 chr2 108967335 108967542 -141720312 - MIR SINE MIR -36 226 7 826 311 133 18 chr2 108967949 108968287 -141719567 + L2 LINE L2 549 925 -2389 482 273 343 8 chr2 108968291 108968658 -141719196 + L2 LINE L2 1450 1939 -1375 1185 239 93 68 chr2 108969361 108969864 -141717990 + LTR1B LTR ERV1 311 826 0 8372 189 51 27 chr2 108969865 108971709 -141716145 + HUERS-P2 LTR ERV1 2 1889 -1199 2912 258 11 18 chr2 108971713 108972499 -141715355 + BaEV-int LTR ERV1 3157 3937 -2712 1994 149 7 3 chr2 108972704 108973012 -141714842 + AluSx SINE Alu 1 309 -3 2119 93 7 0 chr2 108973172 108973488 -141714366 - AluY SINE Alu 0 318 1 644 221 16 134 chr2 108973809 108974063 -141713791 + MIR SINE MIR 39 262 0 528 134 0 0 chr2 108974094 108974176 -141713678 - AluSp/q SINE Alu -16 297 216 2167 115 3 0 chr2 108974356 108974652 -141713202 + AluSx SINE Alu 1 297 -15 779 151 52 0 chr2 108974701 108974873 -141712981 - L1MA4A LINE L1 -2 6301 6121 4095 183 72 30 chr2 108974873 108975188 -141712666 - L1MA4A LINE L1 -399 5904 5604 2096 89 20 14 chr2 108975188 108975480 -141712374 - AluY SINE Alu -17 294 1 4095 183 72 30 chr2 108975480 108975885 -141711969 - L1MA4A LINE L1 -699 5604 5217 1562 186 7 4 chr2 108975885 108976164 -141711690 + AluJo SINE Alu 21 300 -12 4095 183 72 30 chr2 108976164 108977186 -141710668 - L1MA4A LINE L1 -1086 5217 4091 2250 103 0 0 chr2 108977574 108977865 -141709989 - AluSc SINE Alu -18 291 1 1815 167 10 3 chr2 108977868 108978162 -141709692 - AluJo SINE Alu -16 296 1 248 286 0 0 chr2 108978201 108978257 -141709597 - MER58 DNA MER1_type -29 2391 131 35 41 0 0 chr2 108978272 108978321 -141709533 + AT_rich Low_complexity Low_complexity 1 49 0 1057 185 213 131 chr2 108978374 108978801 -141709053 - LTR40a LTR ERVL 0 462 1 404 229 76 9 chr2 108978801 108978906 -141708948 - MIR SINE MIR -134 128 17 598 230 150 27 chr2 108978906 108979093 -141708761 + MER58C DNA MER1_type 1 210 -5 2110 134 0 6 chr2 108979213 108979561 -141708293 + AluSx SINE Alu 1 312 0 806 279 118 17 chr2 108979820 108980167 -141707687 + L2 LINE L2 2414 2795 -519 532 221 89 132 chr2 108980210 108980535 -141707319 + L2 LINE L2 2999 3309 -4 773 161 0 62 chr2 108981312 108981474 -141706380 - MER58B DNA MER1_type -11 330 179 1674 124 113 7 chr2 108981475 108981749 -141706105 - AluSg1 SINE Alu -6 303 1 23 78 0 0 chr2 108981751 108981802 -141706052 + AT_rich Low_complexity Low_complexity 1 51 0 202 194 41 41 chr2 108982419 108982517 -141705337 + (TTATA)n Simple_repeat Simple_repeat 5 102 0 * 222 200 40 0 chr2 108982444 108982519 -141705335 + (TA)n Simple_repeat Simple_repeat 2 79 0 278 226 38 0 chr2 108983065 108983118 -141704736 + MIR SINE MIR 56 110 -152 1293 181 122 11 chr2 108983159 108983430 -141704424 + AluJo SINE Alu 12 312 0 2296 102 0 37 chr2 108983936 108984261 -141703593 + AluSq SINE Alu 1 313 0 2222 115 3 0 chr2 108985284 108985580 -141702274 - AluSx SINE Alu -15 297 1 249 335 86 40 chr2 108986082 108986234 -141701620 + L2 LINE L2 3114 3272 0 234 364 51 25 chr2 108987517 108987635 -141700219 - L2 LINE L2 -30 3242 3122 789 293 0 0 chr2 108987956 108988161 -141699693 + MIR SINE MIR 38 242 -20 29 78 0 0 chr2 108988365 108988429 -141699425 + AT_rich Low_complexity Low_complexity 1 64 0 271 0 0 49 chr2 108988530 108988571 -141699283 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2063 84 7 31 chr2 108988573 108988860 -141698994 - AluY SINE Alu -31 280 1 1870 139 11 0 chr2 108989619 108989892 -141697962 - AluSx SINE Alu -15 297 22 517 288 95 51 chr2 108990008 108990324 -141697530 + MLT1I LTR MaLR 47 376 -33 1288 245 23 13 chr2 108990349 108990723 -141697131 + L1ME LINE L1 5288 5652 -469 2259 111 31 18 chr2 108990831 108991220 -141696634 + MER11C LTR ERVK 678 1071 0 757 182 16 36 chr2 108991470 108991662 -141696192 - MER53 DNA DNA -1 188 1 2162 116 3 0 chr2 108992163 108992456 -141695398 - AluSx SINE Alu -18 294 1 2491 80 0 6 chr2 108992510 108992823 -141695031 - AluY SINE Alu 0 311 1 209 301 75 21 chr2 108993187 108993280 -141694574 - MIR SINE MIR -142 120 23 369 227 53 73 chr2 108993902 108994052 -141693802 - MIR SINE MIR -81 181 35 256 310 89 78 chr2 108994177 108994525 -141693329 - L2 LINE L2 -52 3261 2910 24 32 0 0 chr2 108997211 108997242 -141690612 + AT_rich Low_complexity Low_complexity 1 31 0 1789 174 7 7 chr2 108997369 108997674 -141690180 + AluJo SINE Alu 1 305 -7 1610 150 35 52 chr2 108998494 108998810 -141689044 + AluJb SINE Alu 3 313 0 2016 148 3 0 chr2 108999759 109000057 -141687797 + AluSx SINE Alu 1 299 -13 2303 268 69 45 chr2 109000075 109001244 -141686610 - L1M3b LINE L1 -5201 1687 611 22 0 0 0 chr2 109001717 109001739 -141686115 + AT_rich Low_complexity Low_complexity 1 22 0 2887 132 69 13 chr2 109002128 109002669 -141685185 + LTR10C LTR ERV1 12 505 0 447 236 181 79 chr2 109002937 109003153 -141684701 - MIR SINE MIR -5 257 20 304 346 9 9 chr2 109003351 109003458 -141684396 + MIR3 SINE MIR 75 181 -27 247 289 74 0 chr2 109004232 109004353 -141683501 + L1ME LINE L1 5732 5861 -260 923 224 96 0 chr2 109005826 109006076 -141681778 - L1MB5 LINE L1 -9 6165 5892 * 1015 312 28 20 chr2 109006075 109006466 -141681388 - L1M3b LINE L1 -6462 397 4 197 242 0 76 chr2 109006528 109006594 -141681260 - L3 LINE CR1 -3 1574 1514 2132 160 95 0 chr2 109008611 109008999 -141678855 - MSTA LTR MaLR -3 425 1 7977 194 10 16 chr2 109008999 109010636 -141677218 - MSTA-int LTR MaLR 0 1651 25 649 185 73 7 chr2 109010685 109010843 -141677011 - MSTB LTR MaLR -244 184 1 867 264 59 6 chr2 109010962 109011265 -141676589 - MLT1H LTR MaLR -206 389 42 282 281 21 10 chr2 109011424 109011520 -141676334 + MLT1H LTR MaLR 128 224 -325 4519 141 11 40 chr2 109011537 109012394 -141675460 - L1MA2 LINE L1 0 6304 5473 1223 217 43 8 chr2 109012541 109012938 -141674916 - L1 LINE L1 -2739 3407 2997 234 314 160 0 chr2 109013155 109013330 -141674524 - L2 LINE L2 -63 3250 3048 253 184 13 13 chr2 109013962 109014038 -141673816 + GA-rich Low_complexity Low_complexity 3 78 0 28 0 0 0 chr2 109014217 109014245 -141673609 + AT_rich Low_complexity Low_complexity 1 28 0 1306 128 13 4 chr2 109016486 109016713 -141671141 + L1MA4A LINE L1 6065 6293 -10 305 325 127 0 chr2 109016965 109017091 -141670763 + MIR3 SINE MIR 42 183 -25 414 173 107 0 chr2 109017383 109017458 -141670396 + L1PA13 LINE L1 1 83 -6704 * 8033 163 23 30 chr2 109017452 109018512 -141669342 + L1P LINE L1 3644 4689 -1457 2201 106 7 3 chr2 109018512 109018813 -141669041 + AluY SINE Alu 1 302 -9 8033 163 23 30 chr2 109018813 109019512 -141668342 + L1P LINE L1 4689 5391 -755 1856 185 56 22 chr2 109019510 109020298 -141667556 + L1MCa LINE L1 1711 2479 -3947 * 1885 213 14 2 chr2 109020302 109020715 -141667139 + L1MC1 LINE L1 5911 6328 -5 324 248 126 32 chr2 109023489 109023722 -141664132 + MER115 DNA AcHobo 591 693 0 27 29 0 0 chr2 109023900 109023934 -141663920 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 109024807 109024829 -141663025 + AT_rich Low_complexity Low_complexity 1 22 0 417 292 157 11 chr2 109026598 109026776 -141661078 - MIR SINE MIR -11 251 48 2338 113 0 0 chr2 109028117 109028417 -141659437 - AluSx SINE Alu -12 300 1 382 216 164 17 chr2 109028417 109028533 -141659321 - MIR SINE MIR -71 191 59 1687 166 6 49 chr2 109029424 109029750 -141658104 + AluJb SINE Alu 1 312 0 23 54 0 0 chr2 109029805 109029842 -141658012 + AT_rich Low_complexity Low_complexity 1 37 0 339 245 0 0 chr2 109030164 109030258 -141657596 + (CA)n Simple_repeat Simple_repeat 1 94 0 339 337 111 17 chr2 109030282 109030454 -141657400 - MIR SINE MIR -73 189 2 183 156 0 0 chr2 109033288 109033320 -141654534 + GA-rich Low_complexity Low_complexity 3 34 0 1285 27 0 0 chr2 109033446 109033596 -141654258 + AluY SINE Alu 162 311 0 868 196 18 96 chr2 109034035 109034316 -141653538 + MLT1D-int LTR MaLR 393 651 -720 1425 273 22 99 chr2 109034365 109035159 -141652695 + MLT1D-int LTR MaLR 653 1730 -5 1794 210 126 9 chr2 109035166 109035618 -141652236 + MLT1D LTR MaLR 1 505 0 920 266 50 48 chr2 109035662 109036038 -141651816 - MLT2C1 LTR ERVL -20 377 1 703 260 121 42 chr2 109036040 109036537 -141651317 + L1MC4 LINE L1 7365 7900 -142 237 33 0 0 chr2 109036561 109036591 -141651263 + (TG)n Simple_repeat Simple_repeat 1 30 0 367 175 0 0 chr2 109037752 109037815 -141650039 - MLT1E3 LTR MaLR 0 624 562 21 57 0 0 chr2 109038586 109038621 -141649233 + AT_rich Low_complexity Low_complexity 1 35 0 258 32 0 0 chr2 109041573 109041604 -141646250 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1870 131 0 31 chr2 109041607 109041897 -141645957 - AluSx SINE Alu -31 281 1 21 36 0 0 chr2 109041960 109041988 -141645866 + AT_rich Low_complexity Low_complexity 1 28 0 267 227 27 27 chr2 109042688 109042763 -141645091 + MIR3 SINE MIR 109 183 -25 241 400 30 17 chr2 109043534 109043769 -141644085 - L2 LINE L2 -2666 648 411 312 284 44 54 chr2 109044106 109044403 -141643451 - MER41E LTR ERV1 -59 453 187 283 267 0 23 chr2 109044853 109044939 -141642915 + MER69 DNA AcHobo 2442 2525 -1 232 345 72 70 chr2 109044964 109045512 -141642342 + L2 LINE L2 2500 3059 -213 235 320 137 33 chr2 109045599 109045752 -141642102 + L2 LINE L2 3104 3272 0 768 188 10 0 chr2 109046190 109046382 -141641472 + Charlie5 DNA MER1_type 2431 2624 0 3636 32 9 0 chr2 109046951 109047385 -141640469 - L1PA3 LINE L1 0 6155 5718 215 255 0 0 chr2 109048007 109048058 -141639796 + A-rich Low_complexity Low_complexity 1 51 0 200 221 0 15 chr2 109048074 109048142 -141639712 + GA-rich Low_complexity Low_complexity 1 67 0 30 45 0 0 chr2 109049348 109049392 -141638462 + AT_rich Low_complexity Low_complexity 1 44 0 250 275 60 36 chr2 109049473 109049640 -141638214 + L1ME4a LINE L1 5938 6108 -13 402 368 62 34 chr2 109050412 109050703 -141637151 + LTR33 LTR ERVL 3 301 -220 213 208 47 19 chr2 109050819 109050925 -141636929 + (TA)n Simple_repeat Simple_repeat 2 110 0 215 238 0 0 chr2 109050972 109051014 -141636840 + (TATATG)n Simple_repeat Simple_repeat 3 44 0 1875 348 59 17 chr2 109051048 109052263 -141635591 + ERVL LTR ERVL 1121 2386 -3378 2193 130 7 0 chr2 109052289 109052597 -141635257 + AluSp SINE Alu 1 310 -3 399 274 55 40 chr2 109052652 109052853 -141635001 + ERVL LTR ERVL 2485 2688 -2966 292 374 32 36 chr2 109053099 109053451 -141634403 - L2 LINE L2 -292 2980 2630 775 301 75 13 chr2 109053525 109053910 -141633944 - Charlie7 DNA MER1_type -1923 689 281 324 267 56 0 chr2 109054004 109054094 -141633760 - Charlie7 DNA MER1_type -2511 101 7 686 288 68 34 chr2 109055222 109055596 -141632258 + MIR SINE MIR 1 256 -6 186 118 0 0 chr2 109055597 109055631 -141632223 + (ATG)n Simple_repeat Simple_repeat 2 35 0 676 268 11 21 chr2 109056627 109056817 -141631037 - MER5A DNA MER1_type -1 188 1 261 371 106 0 chr2 109056842 109056974 -141630880 + MIR3 SINE MIR 32 177 -31 480 374 48 4 chr2 109057305 109057532 -141630322 - MIR SINE MIR -11 251 15 344 97 48 32 chr2 109057559 109057683 -141630171 + (TA)n Simple_repeat Simple_repeat 1 126 0 2222 111 0 10 chr2 109058193 109058491 -141629363 - AluSg SINE Alu -15 295 1 393 271 96 57 chr2 109058788 109059304 -141628550 + MER34C LTR ERV1 5 539 -3 606 298 43 11 chr2 109059638 109059826 -141628028 - MIR SINE MIR -46 216 23 416 240 311 7 chr2 109059850 109060146 -141627708 + L2 LINE L2 2414 2799 -515 694 328 37 4 chr2 109060528 109060772 -141627082 + MIR SINE MIR 11 262 0 1515 210 39 17 chr2 109061323 109061680 -141626174 - MLT1A1 LTR MaLR 0 365 1 1622 150 21 38 chr2 109061719 109062026 -141625828 - AluSx SINE Alu 0 302 1 193 113 210 48 chr2 109063099 109063161 -141624693 - MIR SINE MIR -108 154 83 1929 157 0 3 chr2 109063714 109064008 -141623846 + AluJb SINE Alu 1 293 -19 482 298 109 18 chr2 109064031 109064427 -141623427 + L1MEc LINE L1 1366 1797 -4599 326 282 60 26 chr2 109064655 109064772 -141623082 + L1MEc LINE L1 2135 2255 -4141 1270 272 100 17 chr2 109064815 109065693 -141622161 + L1MEc LINE L1 2530 3480 -2735 3802 88 6 0 chr2 109065740 109066237 -141621617 + LTR3b LTR ERVK 1 500 0 236 276 26 0 chr2 109066242 109066318 -141621536 - L1M4 LINE L1 -1329 4817 4740 455 316 178 8 chr2 109066331 109066756 -141621098 + L1MEc LINE L1 3509 3860 -2355 5568 142 8 2 chr2 109066756 109068015 -141619839 - L1PA16 LINE L1 0 6166 4916 455 316 178 8 chr2 109068015 109068370 -141619484 + L1MEc LINE L1 3860 4422 -1793 1026 284 107 33 chr2 109068591 109069189 -141618665 + L1M2 LINE L1 4819 5464 -789 2218 99 0 0 chr2 109069189 109069500 -141618354 + AluSg SINE Alu 1 311 0 1026 284 107 33 chr2 109069500 109069559 -141618295 + L1M2 LINE L1 5464 5517 -736 309 257 3 0 chr2 109069571 109069655 -141618199 + L1ME3A LINE L1 5522 5607 -563 1313 232 77 35 chr2 109069658 109070089 -141617765 + L1ME3A LINE L1 5721 6169 -1 630 249 51 11 chr2 109071507 109071684 -141616170 - MER58C DNA MER1_type 0 215 32 1222 156 94 27 chr2 109072175 109072431 -141615423 + AluJb SINE Alu 3 275 -37 342 0 0 0 chr2 109072436 109072474 -141615380 + (TAA)n Simple_repeat Simple_repeat 1 38 0 605 312 65 0 chr2 109072711 109072942 -141614912 + MIR SINE MIR 2 247 -15 235 276 94 16 chr2 109072989 109073116 -141614738 - L1ME LINE L1 -303 5818 5682 11393 35 2 1 chr2 109073140 109074990 -141612864 + L1PA4 LINE L1 3989 5841 -314 35 0 0 0 chr2 109074990 109075025 -141612829 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 109075334 109075355 -141612499 + AT_rich Low_complexity Low_complexity 1 21 0 29 78 0 0 chr2 109075680 109075744 -141612110 + AT_rich Low_complexity Low_complexity 1 64 0 1697 191 0 7 chr2 109075787 109076085 -141611769 + AluJb SINE Alu 1 296 -16 2237 192 16 2 chr2 109076223 109076655 -141611199 + MER65C LTR ERV1 24 461 0 520 126 58 0 chr2 109076658 109076761 -141611093 + L1MB7 LINE L1 5766 5874 -310 764 149 14 7 chr2 109076763 109076904 -141610950 + L1MB7 LINE L1 6000 6141 -43 491 217 28 9 chr2 109077012 109077118 -141610736 + LTR25 LTR ERV1 249 356 -438 303 217 0 58 chr2 109077121 109077190 -141610664 + MER61E LTR ERV1 99 163 -406 2784 7 0 0 chr2 109077307 109077606 -141610248 + AluYa5 SINE Alu 1 299 -12 857 178 18 6 chr2 109077606 109077769 -141610085 + MER61E LTR ERV1 354 518 -51 266 329 20 7 chr2 109077809 109077955 -141609899 + L1M4c LINE L1 429 576 -5727 868 254 37 27 chr2 109077962 109078434 -141609420 + L1M4c LINE L1 2056 2539 -3843 401 228 46 78 chr2 109078876 109079095 -141608759 + L1PA15-16 LINE L1 776 987 -5217 204 125 0 0 chr2 109079096 109079128 -141608726 + (GGAGAA)n Simple_repeat Simple_repeat 6 37 0 676 247 17 82 chr2 109079133 109079489 -141608365 + L1PA15-16 LINE L1 1074 1406 -4797 42896 49 5 0 chr2 109079494 109085618 -141602236 - L1PA3 LINE L1 -3 6152 1 10929 199 21 46 chr2 109085619 109085821 -141602033 - L1MA6 LINE L1 -472 5819 5613 2009 187 45 27 chr2 109085821 109086270 -141601584 + LOR1b LTR ERV1 1 457 -4 10929 199 21 46 chr2 109086270 109088851 -141599003 - L1MA6 LINE L1 -678 5613 3054 302 306 111 0 chr2 109088851 109088959 -141598895 - FLAM_A SINE Alu -12 121 2 10929 199 21 46 chr2 109088959 109089708 -141598146 - L1MA6 LINE L1 -3237 3054 2288 359 177 25 0 chr2 109089716 109089795 -141598059 - L1PA16 LINE L1 -3 6163 6083 * 3217 58 2 32 chr2 109089792 109090255 -141597599 - L1P LINE L1 -4884 1262 814 1012 195 23 0 chr2 109090256 109090471 -141597383 + L1PA15-16 LINE L1 1903 2122 -4081 1192 27 0 0 chr2 109090506 109090654 -141597200 + L1PA3 LINE L1 4450 4597 -1549 3406 29 0 0 chr2 109090767 109091216 -141596638 + L1PA3 LINE L1 5718 6166 0 678 262 123 3 chr2 109091216 109091525 -141596329 + L1 LINE L1 3290 3635 -2511 1103 160 46 13 chr2 109091526 109091764 -141596090 + L1MB4 LINE L1 5923 6168 -12 270 0 0 0 chr2 109091816 109091846 -141596008 + (CA)n Simple_repeat Simple_repeat 2 31 0 2195 197 108 55 chr2 109092090 109092801 -141595053 + LTR41 LTR ERVL 5 753 -20 1709 301 105 6 chr2 109093364 109094281 -141593573 + L2 LINE L2 2153 3161 -152 1969 183 78 2 chr2 109094516 109094914 -141592940 + MSTB1 LTR MaLR 1 428 -4 459 0 0 0 chr2 109095281 109095332 -141592522 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 223 333 0 13 chr2 109095338 109095416 -141592438 + L2 LINE L2 3236 3312 -1 386 187 0 55 chr2 109096348 109096439 -141591415 + LTR38B LTR ERV1 4 89 -521 390 164 15 0 chr2 109096442 109096509 -141591345 - MLT1D LTR MaLR -437 68 1 347 280 21 63 chr2 109096771 109096963 -141590891 + MIR SINE MIR 19 204 -58 566 219 18 61 chr2 109098368 109098532 -141589322 - MER105 DNA DNA -1 203 47 664 253 16 47 chr2 109098538 109098728 -141589126 + MER5A DNA MER1_type 6 189 0 263 311 50 25 chr2 109099312 109099550 -141588304 - HAL1b LINE L1 -432 916 673 2884 133 16 22 chr2 109100076 109100572 -141587282 - MER61-int LTR ERV1 -802 4415 3923 2183 246 75 52 chr2 109100616 109101553 -141586301 + MER31-int LTR ERV1 3337 4294 -642 984 209 83 56 chr2 109101558 109101801 -141586053 - MLT1C LTR MaLR 0 467 209 309 51 0 0 chr2 109101801 109101840 -141586014 + (TG)n Simple_repeat Simple_repeat 2 40 0 984 209 83 56 chr2 109101840 109101968 -141585886 - MLT1C LTR MaLR -258 209 86 461 243 103 82 chr2 109101968 109102260 -141585594 + MLT1B LTR MaLR 3 300 -90 318 196 43 22 chr2 109102685 109102777 -141585077 + MLT1B LTR MaLR 274 367 -7 309 270 34 0 chr2 109102774 109102863 -141584991 - MLT1C LTR MaLR -375 92 1 * 325 241 11 0 chr2 109103045 109103132 -141584722 + MER31-int LTR ERV1 4375 4462 -474 210 315 0 0 chr2 109104251 109104305 -141583549 - MIR SINE MIR -152 110 57 585 76 0 0 chr2 109104362 109104441 -141583413 + (GGAA)n Simple_repeat Simple_repeat 4 82 0 255 61 0 0 chr2 109104441 109104474 -141583380 + (CAGG)n Simple_repeat Simple_repeat 1 33 0 666 215 143 25 chr2 109104620 109104857 -141582997 - LTR50 LTR ERVL 0 795 531 427 258 96 12 chr2 109105028 109105195 -141582659 - LTR50 LTR ERVL -613 182 2 457 261 133 64 chr2 109105233 109105686 -141582168 - MLT1H LTR MaLR -25 524 41 494 276 111 37 chr2 109105773 109106070 -141581784 + MER92B LTR ERV1 318 636 0 828 306 94 46 chr2 109106357 109107537 -141580317 - HERVL LTR ERVL -2475 3179 1922 938 269 5 0 chr2 109107537 109107760 -141580094 - MER58A DNA MER1_type 0 224 1 828 306 94 46 chr2 109107760 109107834 -141580020 - HERVL LTR ERVL -3732 1922 1853 856 237 16 23 chr2 109107934 109108242 -141579612 + L1MB2 LINE L1 3673 3978 -2168 225 286 0 0 chr2 109108251 109108328 -141579526 + L1M4c LINE L1 1394 1470 -4914 24 0 0 0 chr2 109108346 109108370 -141579484 + AT_rich Low_complexity Low_complexity 1 24 0 956 174 42 42 chr2 109108370 109108629 -141579225 - L1MA8 LINE L1 -1 6290 6032 * 1325 229 24 8 chr2 109108625 109108996 -141578858 + L1M4c LINE L1 1454 1830 -4554 2579 134 5 0 chr2 109109084 109109479 -141578375 + THE1B-int LTR MaLR 1178 1574 -6 1785 197 28 3 chr2 109109484 109109839 -141578015 + THE1B LTR MaLR 1 364 0 1759 154 48 38 chr2 109109839 109110234 -141577620 + L1MA9 LINE L1 5907 6305 -7 1636 227 94 21 chr2 109110241 109111110 -141576744 + L1MB2 LINE L1 5001 6011 -160 706 248 153 28 chr2 109111170 109111658 -141576196 + L1MB5 LINE L1 5609 6172 -2 38 61 0 0 chr2 109111658 109111724 -141576130 + AT_rich Low_complexity Low_complexity 1 66 0 249 277 67 28 chr2 109112559 109112812 -141575042 + L1M4c LINE L1 3426 3688 -2694 450 253 13 40 chr2 109112890 109113040 -141574814 + LTR4 LTR ERV1 14 159 -437 792 228 20 68 chr2 109113264 109113558 -141574296 + LTR4 LTR ERV1 317 596 0 390 295 66 12 chr2 109113633 109113799 -141574055 - L1ME LINE L1 -739 5431 5257 22 0 0 0 chr2 109113877 109113899 -141573955 + AT_rich Low_complexity Low_complexity 1 22 0 1975 156 0 0 chr2 109114199 109114487 -141573367 + AluSg SINE Alu 1 288 -22 387 0 0 0 chr2 109115780 109115823 -141572031 + (CA)n Simple_repeat Simple_repeat 2 44 0 7429 112 18 10 chr2 109116738 109117921 -141569933 - HUERS-P3b LTR ERV1 -638 6780 5589 544 54 0 0 chr2 109117921 109117995 -141569859 - HUERS-P3b LTR ERV1 -1969 5449 5376 2232 108 0 0 chr2 109118000 109118296 -141569558 + AluY SINE Alu 5 300 -11 2932 125 25 6 chr2 109118300 109118811 -141569043 - HUERS-P3b LTR ERV1 -2962 4456 3936 * 4395 103 49 14 chr2 109118807 109119505 -141568349 - HUERS-P3b LTR ERV1 -3624 3794 3073 1962 199 29 34 chr2 109119505 109119700 -141568154 + LTR8 LTR ERV1 1 195 -496 2444 74 0 0 chr2 109119700 109119996 -141567858 + AluY SINE Alu 1 296 -15 1962 199 29 34 chr2 109119996 109120243 -141567611 + LTR8 LTR ERV1 195 441 -250 10779 117 15 9 chr2 109120243 109121916 -141565938 - HUERS-P3b LTR ERV1 -4776 2642 960 4778 120 22 1 chr2 109121938 109122663 -141565191 - THE1B-int LTR MaLR -839 741 2 920 136 114 38 chr2 109122664 109122848 -141565006 - THE1B LTR MaLR 0 364 167 408 371 25 5 chr2 109123201 109123398 -141564456 + MIR SINE MIR 7 207 -55 263 280 21 43 chr2 109123811 109123904 -141563950 - MER20B DNA MER1_type -606 177 87 481 193 21 169 chr2 109124223 109124620 -141563234 + L1MC4 LINE L1 6669 7042 -1000 285 367 12 27 chr2 109124796 109125052 -141562802 + L1ME1 LINE L1 271 522 -5874 994 196 79 176 chr2 109125148 109125602 -141562252 + MLT1E3 LTR MaLR 72 601 -23 304 212 28 156 chr2 109125614 109125793 -141562061 + L1ME1 LINE L1 1590 1745 -4651 507 272 132 17 chr2 109125875 109126234 -141561620 + L1ME1 LINE L1 4458 4864 -1351 1837 257 78 33 chr2 109126241 109127394 -141560460 + L1ME1 LINE L1 5026 6230 -5 404 286 73 21 chr2 109127549 109127930 -141559924 + L1MC4 LINE L1 7098 7498 -544 289 261 96 0 chr2 109127916 109128031 -141559823 + L1MC5 LINE L1 7316 7441 -520 * 842 107 18 6 chr2 109128394 109128563 -141559291 + (TAGA)n Simple_repeat Simple_repeat 3 173 0 285 265 71 125 chr2 109130503 109130982 -141556872 + L2 LINE L2 2818 3270 -2 183 156 0 0 chr2 109131036 109131068 -141556786 + (TATG)n Simple_repeat Simple_repeat 1 32 0 304 297 0 22 chr2 109131068 109131159 -141556695 - L1MC4 LINE L1 -1340 6702 6614 * 322 283 0 22 chr2 109131099 109131191 -141556663 + L1MC4 LINE L1 6614 6703 -1339 368 338 58 47 chr2 109132590 109132951 -141554903 + L3 LINE CR1 1087 1451 -126 1275 209 33 36 chr2 109133380 109133711 -141554143 + MLT2C1 LTR ERVL 13 342 -55 335 243 59 0 chr2 109133711 109133847 -141554007 + (TA)n Simple_repeat Simple_repeat 2 145 0 1131 206 24 50 chr2 109133855 109134195 -141553659 + MER44D DNA MER2_type 9 609 0 649 221 38 6 chr2 109135654 109135812 -141552042 - MER5A DNA MER1_type 0 189 27 189 359 86 16 chr2 109135962 109136090 -141551764 + L2 LINE L2 3133 3269 -3 4612 110 11 5 chr2 109139123 109139779 -141548075 - PABL_A LTR ERV1 0 660 1 1545 112 0 2 chr2 109139779 109140072 -141547782 - PABL_A-int LTR ERV1 0 5015 4659 182 276 132 26 chr2 109140285 109140361 -141547493 + MIR SINE MIR 126 209 -53 300 234 64 50 chr2 109140925 109141066 -141546788 + L2 LINE L2 3164 3306 -7 26 50 0 0 chr2 109143081 109143121 -141544733 + AT_rich Low_complexity Low_complexity 1 40 0 218 344 23 31 chr2 109143473 109143601 -141544253 - MIR3 SINE MIR 0 208 82 1426 208 113 3 chr2 109144290 109144626 -141543228 + MER93b LTR ERV1 1 373 0 544 210 153 40 chr2 109144820 109144996 -141542858 + MER58C DNA MER1_type 19 214 -1 520 253 35 12 chr2 109147460 109147630 -141540224 - LTR16A1 LTR ERVL -9 448 275 191 35 0 35 chr2 109148379 109148408 -141539446 + (CGAAA)n Simple_repeat Simple_repeat 2 29 0 2229 105 0 20 chr2 109149269 109149574 -141538280 + AluSx SINE Alu 1 299 -13 192 152 0 0 chr2 109149596 109149629 -141538225 + GA-rich Low_complexity Low_complexity 2 34 0 2468 173 61 4 chr2 109150010 109150485 -141537369 - ERVL LTR ERVL -183 5581 5080 * 10502 168 19 7 chr2 109150477 109151607 -141536247 - ERVL LTR ERVL -2167 3597 2482 5971 34 17 0 chr2 109151607 109152310 -141535544 + L1PA4 LINE L1 5438 6152 -3 243 0 0 0 chr2 109152315 109152342 -141535512 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 10502 168 19 7 chr2 109152342 109152936 -141534918 - ERVL LTR ERVL -3285 2479 1846 793 172 33 28 chr2 109152936 109153180 -141534674 + L1MB7 LINE L1 5107 5352 -812 24 32 0 0 chr2 109154766 109154797 -141533057 + AT_rich Low_complexity Low_complexity 1 31 0 3992 173 40 42 chr2 109154951 109155809 -141532045 + L1MB7 LINE L1 5321 6176 -8 862 258 26 0 chr2 109155975 109156169 -141531685 + MER58A DNA MER1_type 24 222 -2 362 74 19 0 chr2 109156582 109156636 -141531218 + (TGAA)n Simple_repeat Simple_repeat 4 58 0 1649 78 26 13 chr2 109157453 109157683 -141530171 - L1PA7 LINE L1 -2 6152 5920 446 284 123 15 chr2 109158167 109158371 -141529483 + MIR SINE MIR 12 237 -25 2024 138 0 7 chr2 109159214 109159504 -141528350 + AluSx SINE Alu 1 288 -24 678 214 63 3 chr2 109159512 109159761 -141528093 - L1P5 LINE L1 -691 5460 5203 1883 137 7 3 chr2 109159761 109160045 -141527809 + THE1B LTR MaLR 80 364 0 3401 43 5 7 chr2 109160727 109161172 -141526682 - L1PA4 LINE L1 0 6155 5740 1747 153 255 3 chr2 109161208 109161581 -141526273 + MLT1C LTR MaLR 1 467 0 434 183 389 0 chr2 109162488 109162614 -141525240 - MER96 DNA MER1_type? 0 175 1 355 291 69 35 chr2 109162764 109162967 -141524887 + L1MD1 LINE L1 5860 6069 -173 * 1270 155 74 37 chr2 109162803 109163074 -141524780 + L1MB8 LINE L1 5898 6178 0 352 164 3 8 chr2 109163187 109163253 -141524601 - FLAM SINE Alu -9 124 70 814 159 0 8 chr2 109163421 109163553 -141524301 + FRAM SINE Alu 30 160 -16 2393 92 0 16 chr2 109164015 109164331 -141523523 + AluSq SINE Alu 1 311 -2 1096 161 21 81 chr2 109166572 109166808 -141521046 - MLT1B LTR MaLR -163 227 6 977 206 38 62 chr2 109166819 109167185 -141520669 - MSTB2 LTR MaLR -1 456 1 2175 214 112 25 chr2 109167268 109167833 -141520021 - MLT1E2 LTR MaLR -12 614 1 264 287 98 12 chr2 109168019 109168183 -141519671 + MIR SINE MIR 84 261 -1 197 292 42 0 chr2 109168532 109168604 -141519250 + MIR SINE MIR 186 260 -2 441 0 0 0 chr2 109168744 109168793 -141519061 + (CA)n Simple_repeat Simple_repeat 2 50 0 3829 150 74 76 chr2 109168797 109169247 -141518607 + L1MB3 LINE L1 5318 5767 -416 2288 122 0 0 chr2 109169247 109169559 -141518295 + AluSq SINE Alu 1 312 -1 3829 150 74 76 chr2 109169559 109169974 -141517880 + L1MB3 LINE L1 5767 6181 -2 230 168 64 16 chr2 109170715 109170840 -141517014 + CT-rich Low_complexity Low_complexity 1 131 0 258 32 0 0 chr2 109171117 109171148 -141516706 + (CA)n Simple_repeat Simple_repeat 1 31 0 556 277 78 6 chr2 109171889 109172055 -141515799 + MIR SINE MIR 52 229 -33 1607 205 14 0 chr2 109172147 109172440 -141515414 - AluJo SINE Alu -15 297 1 2141 120 0 3 chr2 109172810 109173101 -141514753 - AluSg SINE Alu -20 290 1 206 222 0 0 chr2 109173400 109173436 -141514418 + (TG)n Simple_repeat Simple_repeat 1 36 0 484 242 92 52 chr2 109174583 109174734 -141513120 - L1MEd LINE L1 -5115 1004 860 2005 138 0 27 chr2 109174734 109175032 -141512822 - AluJb SINE Alu -22 290 1 484 242 92 52 chr2 109175032 109175186 -141512668 - L1MEd LINE L1 -5259 860 687 842 306 59 44 chr2 109175252 109175778 -141512076 - L1MEd LINE L1 -5582 537 4 1291 155 22 26 chr2 109176037 109176263 -141511591 + L1MB3 LINE L1 5607 5831 -352 237 292 54 54 chr2 109176308 109176438 -141511416 + L2 LINE L2 3137 3266 -6 2240 93 0 3 chr2 109176447 109176737 -141511117 + AluSc SINE Alu 1 289 -20 211 313 62 0 chr2 109176925 109177021 -141510833 + MIR3 SINE MIR 101 202 -6 2305 39 43 7 chr2 109177660 109177940 -141509914 + AluY SINE Alu 1 290 -21 215 290 16 0 chr2 109178062 109178124 -141509730 + L2 LINE L2 3247 3309 -4 1785 270 147 38 chr2 109178329 109179235 -141508619 + L1MEd LINE L1 4 1008 -5111 1470 229 16 4 chr2 109179565 109180023 -141507831 - MER74A LTR ERVL -25 533 1 882 172 28 88 chr2 109180023 109180236 -141507618 - MER20 DNA MER1_type -18 201 2 1530 193 14 24 chr2 109182674 109182969 -141504885 + AluJo SINE Alu 1 292 -20 2194 98 7 0 chr2 109182976 109183275 -141504579 + AluSc SINE Alu 1 301 0 22 0 0 0 chr2 109183280 109183302 -141504552 + AT_rich Low_complexity Low_complexity 1 22 0 458 314 26 37 chr2 109183713 109183984 -141503870 - L1MC4a LINE L1 -1930 5878 5611 1697 229 18 5 chr2 109184060 109184444 -141503410 - L1ME2 LINE L1 0 6164 5776 199 296 0 0 chr2 109185726 109185770 -141502084 + L2 LINE L2 3244 3287 -26 237 279 0 16 chr2 109185865 109185926 -141501928 + MER97a DNA MER1_type? 2 61 -833 306 118 39 0 chr2 109185976 109186027 -141501827 - FLAM SINE Alu -5 128 76 2823 184 37 123 chr2 109186029 109186996 -141500858 + MER97b DNA MER1_type? 116 999 -54 1997 139 57 28 chr2 109187002 109187354 -141500500 + THE1B LTR MaLR 1 362 -2 11832 101 1 1 chr2 109187356 109188935 -141498919 + THE1B-int LTR MaLR 1 1580 0 1331 181 16 8 chr2 109188935 109189189 -141498665 + THE1B LTR MaLR 1 256 -99 411 153 0 0 chr2 109189189 109189248 -141498606 - AluJ/FLAM SINE Alu -251 61 3 783 129 9 0 chr2 109189289 109189405 -141498449 + THE1B LTR MaLR 248 364 0 338 42 21 0 chr2 109189485 109189533 -141498321 + (TTGG)n Simple_repeat Simple_repeat 3 51 0 2277 181 51 19 chr2 109189535 109190005 -141497849 - MER31A LTR ERV1 0 485 1 339 274 162 0 chr2 109190490 109190607 -141497247 - L2 LINE L2 0 3272 3137 1674 197 0 17 chr2 109191248 109191538 -141496316 - AluJo SINE Alu -27 285 1 4974 78 14 12 chr2 109191923 109192589 -141495265 + PABL_B LTR ERV1 1 667 0 5010 188 45 2 chr2 109192899 109193875 -141493979 + L1PBa LINE L1 627 1644 -5219 556 174 11 0 chr2 109193842 109193934 -141493920 + L1PBb LINE L1 8 100 -6104 * 1721 172 10 10 chr2 109194335 109194632 -141493222 - AluJo SINE Alu -5 307 11 351 304 106 24 chr2 109195366 109195573 -141492281 + LTR16B LTR ERVL 211 434 -30 287 249 132 37 chr2 109195949 109196138 -141491716 - LTR50 LTR ERVL -585 210 4 293 143 36 0 chr2 109196140 109196196 -141491658 + MER116 DNA Mariner 23 80 0 26 82 0 0 chr2 109196212 109196273 -141491581 + AT_rich Low_complexity Low_complexity 1 61 0 2438 91 3 0 chr2 109196277 109196586 -141491268 + AluSq SINE Alu 1 310 -3 183 189 0 27 chr2 109197209 109197246 -141490608 - L3 LINE CR1 -10 1567 1532 2315 207 13 50 chr2 109197315 109197919 -141489935 + L1ME3 LINE L1 5581 6162 0 204 323 72 40 chr2 109199067 109199290 -141488564 - L2 LINE L2 -1 3312 3083 1584 190 24 75 chr2 109199355 109199766 -141488088 - MLT1B LTR MaLR 0 390 1 234 315 101 13 chr2 109199793 109199942 -141487912 - L2 LINE L2 -784 2530 2369 408 271 145 65 chr2 109199965 109200393 -141487461 - L2 LINE L2 -641 2673 2212 473 262 6 64 chr2 109200397 109200569 -141487285 - LTR16A1 LTR ERVL -2 455 294 416 269 0 35 chr2 109200630 109200771 -141487083 - LTR16A1 LTR ERVL -319 138 3 181 336 72 8 chr2 109200772 109200897 -141486957 - L2 LINE L2 -1096 2218 2086 284 336 31 8 chr2 109201445 109201573 -141486281 + MER94 DNA DNA 4 134 0 957 233 60 26 chr2 109201684 109202049 -141485805 - LTR16A LTR ERVL -15 435 16 33 0 0 0 chr2 109203527 109203560 -141484294 + AT_rich Low_complexity Low_complexity 1 33 0 3377 44 2 5 chr2 109204534 109204947 -141482907 - L1PA7 LINE L1 0 6154 5743 736 253 104 0 chr2 109204955 109205157 -141482697 - MIR SINE MIR -39 223 1 23 33 0 0 chr2 109205714 109205744 -141482110 + AT_rich Low_complexity Low_complexity 1 30 0 200 354 16 8 chr2 109206140 109206267 -141481587 - MIR SINE MIR -131 131 4 423 349 106 41 chr2 109207412 109208016 -141479838 - L2 LINE L2 -564 2750 2108 294 378 45 12 chr2 109208225 109208471 -141479383 - L2 LINE L2 -413 2901 2648 597 272 38 5 chr2 109208972 109209156 -141478698 - MIR SINE MIR -36 226 37 319 234 0 0 chr2 109209487 109209551 -141478303 + L1MC5 LINE L1 7838 7901 -60 387 0 0 0 chr2 109209669 109209712 -141478142 + (CA)n Simple_repeat Simple_repeat 2 44 0 30 27 0 0 chr2 109210107 109210144 -141477710 + AT_rich Low_complexity Low_complexity 1 37 0 252 0 0 0 chr2 109210471 109210499 -141477355 + (CA)n Simple_repeat Simple_repeat 2 29 0 261 368 11 0 chr2 109210704 109210799 -141477055 + MER81 DNA DNA 19 114 0 2321 251 125 59 chr2 109211137 109212672 -141475182 + L2 LINE L2 1674 3300 -13 13975 31 0 3 chr2 109212681 109215084 -141472770 + L1PA4 LINE L1 3755 6154 -1 196 322 0 17 chr2 109216039 109216098 -141471756 + MER5B DNA MER1_type 89 146 -32 5998 105 17 1 chr2 109216101 109216966 -141470888 - L1PA10 LINE L1 -10 6473 5595 20952 176 11 41 chr2 109216988 109222036 -141465818 - L1PA10 LINE L1 -1346 5115 2 4828 130 12 3 chr2 109223521 109224284 -141463570 - L1MA6 LINE L1 0 6300 5531 417 146 33 44 chr2 109224390 109224481 -141463373 - L1MA6 LINE L1 -757 5534 5445 217 281 73 61 chr2 109224558 109224722 -141463132 + MIR3 SINE MIR 37 202 -6 716 178 67 28 chr2 109224854 109225034 -141462820 + L1MA9 LINE L1 6083 6269 -43 218 268 49 37 chr2 109225643 109225725 -141462129 + L2 LINE L2 3138 3220 -52 276 102 0 0 chr2 109225746 109225795 -141462059 + (TGGA)n Simple_repeat Simple_repeat 2 50 0 225 194 151 43 chr2 109226618 109226711 -141461143 + MIR SINE MIR 157 259 -3 1550 130 53 32 chr2 109226740 109226850 -141461004 - AluSx SINE Alu -60 252 146 2439 92 0 0 chr2 109226850 109227153 -141460701 - AluSx SINE Alu -9 303 1 1550 130 53 32 chr2 109227153 109227288 -141460566 - AluSx SINE Alu -166 146 2 292 189 90 99 chr2 109227529 109227640 -141460214 - MLT1J LTR MaLR -13 498 389 2619 106 19 0 chr2 109229075 109229443 -141458411 + THE1C LTR MaLR 1 375 0 220 235 0 25 chr2 109230356 109230437 -141457417 + (TAA)n Simple_repeat Simple_repeat 3 81 0 464 254 151 0 chr2 109231080 109231206 -141456648 + Charlie8 DNA MER1_type 1 145 -2272 2403 70 0 3 chr2 109231738 109232036 -141455818 - AluSc SINE Alu -12 297 1 746 219 26 0 chr2 109232052 109232244 -141455610 - L1M4 LINE L1 -1722 4424 4228 696 185 8 0 chr2 109232244 109232363 -141455491 - Tigger3(Golem) DNA MER2_type 0 3029 2910 497 145 40 0 chr2 109232369 109232445 -141455409 - Tigger3(Golem) DNA MER2_type -2948 81 3 1175 226 54 7 chr2 109232446 109232743 -141455111 - L1M4 LINE L1 -1916 4230 3920 1725 216 100 32 chr2 109232756 109233224 -141454630 - MLT1D LTR MaLR 0 505 6 5354 223 68 7 chr2 109233231 109234678 -141453176 - L1M4 LINE L1 -2168 3978 2439 2546 62 0 0 chr2 109234678 109234983 -141452871 - AluY SINE Alu -6 305 1 5354 223 68 7 chr2 109234983 109234996 -141452858 - L1M4 LINE L1 -3707 2439 2428 9136 200 6 22 chr2 109235034 109236058 -141451796 + L1 LINE L1 2276 3255 -2891 2198 132 7 0 chr2 109236058 109236368 -141451486 + AluSq SINE Alu 1 312 -1 9136 200 6 22 chr2 109236368 109237361 -141450493 + L1 LINE L1 3255 4262 -1884 843 290 117 21 chr2 109237384 109237811 -141450043 + L3 LINE CR1 1107 1574 -3 322 297 85 18 chr2 109237875 109238040 -141449814 + L2 LINE L2 2678 2853 -461 1327 259 38 17 chr2 109238073 109238548 -141449306 + L1M4 LINE L1 3064 3548 -2598 303 320 129 49 chr2 109238746 109238906 -141448948 - HAL1 LINE L1 -1313 1194 1048 1899 121 33 39 chr2 109238906 109239213 -141448641 - AluSx SINE Alu -7 305 1 303 320 129 49 chr2 109239213 109239402 -141448452 - HAL1 LINE L1 -1459 1048 817 21 0 0 0 chr2 109240135 109240156 -141447698 + AT_rich Low_complexity Low_complexity 1 21 0 684 329 137 22 chr2 109240161 109240760 -141447094 + L2 LINE L2 1780 2447 -867 421 293 81 45 chr2 109240852 109241098 -141446756 + MLT1L LTR MaLR 8 262 -353 806 167 0 29 chr2 109242055 109242193 -141445661 + AluJo SINE Alu 1 134 -178 2480 91 0 0 chr2 109242194 109242503 -141445351 + AluSq SINE Alu 1 309 -4 354 228 30 40 chr2 109242925 109243026 -141444828 + MIR SINE MIR 57 156 -106 2279 95 3 3 chr2 109243045 109243341 -141444513 + AluSp SINE Alu 1 296 -17 5208 112 21 11 chr2 109243341 109244093 -141443761 + L1PA11 LINE L1 5414 6173 -1 387 226 88 78 chr2 109244123 109244340 -141443514 + L1MC5 LINE L1 7718 7936 -25 1708 187 42 76 chr2 109244702 109244763 -141443091 + MER21A LTR ERV1 511 573 -358 1901 149 14 0 chr2 109244763 109245059 -141442795 + AluSx SINE Alu 3 302 -10 1708 187 42 76 chr2 109245059 109245404 -141442450 + MER21A LTR ERV1 573 903 -28 378 216 11 0 chr2 109245429 109245517 -141442337 + L1MC4a LINE L1 6523 6611 -1197 21 36 0 0 chr2 109245543 109245571 -141442283 + AT_rich Low_complexity Low_complexity 1 28 0 183 80 0 0 chr2 109245584 109245609 -141442245 + (CATATA)n Simple_repeat Simple_repeat 6 30 0 759 98 0 27 chr2 109245623 109245735 -141442119 - MLT1D LTR MaLR -3 502 394 850 163 114 0 chr2 109245748 109245914 -141441940 - MLT1D LTR MaLR -289 216 32 3744 201 90 26 chr2 109245932 109246869 -141440985 + L1MC4 LINE L1 6632 7628 -414 2606 105 0 0 chr2 109246868 109247212 -141440642 + L1P3 LINE L1 1 344 -6117 * 592 201 179 0 chr2 109249348 109249527 -141438327 - L2 LINE L2 0 3313 3103 2453 66 0 16 chr2 109250446 109250751 -141437103 - AluY SINE Alu -11 300 1 348 293 121 96 chr2 109250965 109251405 -141436449 + L2 LINE L2 2448 2898 -416 1031 197 5 5 chr2 109251843 109252046 -141435808 - MER3 DNA MER1_type 0 209 7 1539 161 69 14 chr2 109252049 109252340 -141435514 - AluJb SINE Alu -5 307 1 830 162 7 7 chr2 109252342 109252484 -141435370 - FLAM_C SINE Alu -1 142 1 356 289 7 7 chr2 109253307 109253442 -141434412 + L1M3de LINE L1 826 960 -4995 2676 211 43 75 chr2 109253450 109254199 -141433655 + MER50 LTR ERV1 10 734 0 712 208 24 33 chr2 109254199 109254460 -141433394 + L1M3de LINE L1 935 1199 -4766 577 457 138 10 chr2 109254495 109254900 -141432954 + MER74B LTR ERVL 89 545 -77 247 308 125 0 chr2 109254840 109254944 -141432910 - MER88 LTR ERVL -311 153 37 * 2341 217 38 56 chr2 109255003 109255331 -141432523 + L1M4c LINE L1 1144 1476 -4908 3401 116 2 45 chr2 109255331 109255883 -141431971 - L1MA2 LINE L1 0 6304 5777 2341 217 38 56 chr2 109255883 109256272 -141431582 + L1M4c LINE L1 1476 1848 -4536 4638 111 66 23 chr2 109256310 109257088 -141430766 - MER4-int LTR ERV1 -1951 4647 3837 207 0 0 0 chr2 109257097 109257120 -141430734 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2002 102 11 14 chr2 109257122 109257406 -141430448 - AluSp SINE Alu -30 283 1 1521 73 55 40 chr2 109257406 109257614 -141430240 - MER4-int LTR ERV1 -3585 3013 2799 2299 90 0 7 chr2 109257614 109257913 -141429941 - AluSc SINE Alu -12 297 1 1521 73 55 40 chr2 109257913 109257977 -141429877 - MER4-int LTR ERV1 -3799 2799 2737 1221 179 75 4 chr2 109257977 109258217 -141429637 + LTR8 LTR ERV1 1 257 -434 10664 119 109 56 chr2 109258335 109258893 -141428961 - MER4B-int LTR ERV1 -4289 2309 1782 2181 109 7 3 chr2 109258893 109259196 -141428658 - AluY SINE Alu -7 304 1 10664 119 109 56 chr2 109259196 109259838 -141428016 - MER4B-int LTR ERV1 -4816 1782 1176 2194 118 0 3 chr2 109259838 109260134 -141427720 + AluSq SINE Alu 1 295 -18 10664 119 109 56 chr2 109260134 109260919 -141426935 - MER4B-int LTR ERV1 -5422 1176 193 261 0 0 0 chr2 109260919 109260948 -141426906 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 10664 119 109 56 chr2 109260948 109261152 -141426702 - MER4B-int LTR ERV1 -6405 193 1 973 149 7 13 chr2 109261156 109261310 -141426544 - MER4B LTR ERV1 -1 609 457 29995 102 22 14 chr2 109261410 109266299 -141421555 + L1PA7 LINE L1 336 5185 -1284 2307 99 0 0 chr2 109266299 109266592 -141421262 + AluY SINE Alu 1 293 -18 29995 102 22 14 chr2 109266592 109267085 -141420769 + L1PA7 LINE L1 5185 5673 -796 2380 92 0 0 chr2 109267085 109267389 -141420465 + AluY SINE Alu 1 304 -7 29995 102 22 14 chr2 109267389 109268055 -141419799 + L1PA7 LINE L1 5673 6469 0 2261 70 10 20 chr2 109268064 109268364 -141419490 + AluY SINE Alu 1 297 -14 1173 178 181 33 chr2 109268364 109268718 -141419136 + L1MC4 LINE L1 7618 8024 -18 2635 138 19 5 chr2 109268845 109269259 -141418595 - LOR1b LTR ERV1 0 461 42 633 114 0 0 chr2 109269295 109269383 -141418471 - LOR1b-int LTR ERV1 -3 8117 8030 * 1976 74 0 19 chr2 109269382 109269653 -141418201 - LOR1b-int LTR ERV1 -2056 6064 5799 * 31689 110 46 34 chr2 109269641 109273177 -141414677 - LOR1b-int LTR ERV1 -2596 5524 2031 2241 104 3 13 chr2 109273177 109273484 -141414370 - AluY SINE Alu -7 304 1 31689 110 46 34 chr2 109273484 109274543 -141413311 - LOR1b-int LTR ERV1 -6089 2031 986 2090 122 11 0 chr2 109274543 109274829 -141413025 + AluSx SINE Alu 1 289 -23 31689 110 46 34 chr2 109274829 109275425 -141412429 - LOR1b-int LTR ERV1 -7134 986 438 2343 84 0 7 chr2 109275425 109275722 -141412132 + AluY SINE Alu 1 295 -16 31689 110 46 34 chr2 109275722 109276166 -141411688 - LOR1b-int LTR ERV1 -7682 438 1 2719 158 40 2 chr2 109276166 109276610 -141411244 - LOR1b LTR ERV1 0 461 1 1758 172 25 73 chr2 109276727 109277135 -141410719 + MLT1B LTR MaLR 1 388 -2 2378 125 58 12 chr2 109277209 109277640 -141410214 + MER61C LTR ERV1 1 434 0 22 35 0 0 chr2 109277685 109277714 -141410140 + AT_rich Low_complexity Low_complexity 1 29 0 2441 78 0 0 chr2 109277831 109278127 -141409727 + AluSp SINE Alu 1 296 -17 2251 129 3 0 chr2 109278324 109278635 -141409219 + AluSx SINE Alu 1 312 0 431 170 43 11 chr2 109279023 109279117 -141408737 + L1ME4a LINE L1 6024 6120 -1 219 186 0 0 chr2 109279960 109280003 -141407851 + (TG)n Simple_repeat Simple_repeat 2 44 0 330 250 0 0 chr2 109280003 109280091 -141407763 + (CA)n Simple_repeat Simple_repeat 2 89 0 493 271 71 7 chr2 109282024 109282179 -141405675 - MIR SINE MIR -8 254 90 191 261 14 14 chr2 109282282 109282351 -141405503 - MIR3 SINE MIR -5 203 135 2302 86 3 3 chr2 109282503 109282795 -141405059 + AluSx SINE Alu 1 292 -20 1799 80 0 0 chr2 109283744 109283968 -141403886 - AluSq SINE Alu -11 302 79 427 212 49 103 chr2 109283998 109284182 -141403672 + L1MC5 LINE L1 7712 7885 -76 192 258 258 0 chr2 109284435 109284563 -141403291 + MIR3 SINE MIR 42 202 -6 2386 107 0 0 chr2 109284585 109284894 -141402960 - AluSc SINE Alu 0 309 1 10246 182 6 12 chr2 109285742 109287546 -141400308 + BaEV-int LTR ERV1 4307 6098 -551 686 258 40 106 chr2 109288755 109289150 -141398704 - L1ME3A LINE L1 -255 5915 5547 1763 119 24 0 chr2 109289150 109289401 -141398453 - AluSx SINE Alu -24 288 32 2038 98 10 52 chr2 109289551 109289856 -141397998 + AluSx SINE Alu 1 292 -20 30 0 0 0 chr2 109289983 109290013 -141397841 + AT_rich Low_complexity Low_complexity 1 30 0 403 293 153 9 chr2 109290936 109291165 -141396689 + MLT1J1 LTR MaLR 13 274 -172 1134 290 57 43 chr2 109291234 109291792 -141396062 + L2 LINE L2 2287 2852 -462 286 301 12 0 chr2 109291852 109291935 -141395919 + L2 LINE L2 2847 2930 -342 375 219 94 0 chr2 109291952 109292048 -141395806 - LTR33 LTR ERVL -55 466 362 241 260 0 156 chr2 109292126 109292222 -141395632 + L2 LINE L2 3175 3255 -17 355 246 12 12 chr2 109292848 109292965 -141394889 - L1 LINE L1 -3654 3194 3078 225 0 0 0 chr2 109292965 109292990 -141394864 + (T)n Simple_repeat Simple_repeat 1 25 0 530 139 0 0 chr2 109293026 109293105 -141394749 + AluSg/x SINE Alu 166 244 -66 1872 117 12 4 chr2 109293105 109293362 -141394492 - AluSq SINE Alu -54 259 1 11053 189 77 34 chr2 109293394 109293928 -141393926 - L1 LINE L1 -3820 3028 2518 2214 136 101 20 chr2 109293928 109294324 -141393530 + MSTA LTR MaLR 1 428 0 11053 189 77 34 chr2 109294324 109294711 -141393143 - L1 LINE L1 -4330 2518 2149 2102 122 10 3 chr2 109294711 109295015 -141392839 - AluSq SINE Alu -7 306 1 11053 189 77 34 chr2 109295015 109295033 -141392821 - L1 LINE L1 -4699 2149 2133 2438 106 0 0 chr2 109295033 109295345 -141392509 - AluSx SINE Alu 0 312 1 11053 189 77 34 chr2 109295345 109297158 -141390696 - L1 LINE L1 -4715 2133 155 245 163 0 0 chr2 109297159 109297202 -141390652 - MSTB LTR MaLR 0 426 384 200 149 21 0 chr2 109297216 109297263 -141390591 + GA-rich Low_complexity Low_complexity 2 49 0 2238 138 20 20 chr2 109297263 109297654 -141390200 - MSTB LTR MaLR -35 391 1 716 140 40 20 chr2 109297655 109297805 -141390049 - L1 LINE L1 -6696 153 1 2088 138 35 0 chr2 109297839 109298186 -141389668 - L1PB3 LINE L1 -2 6152 5794 989 101 0 7 chr2 109298196 109298345 -141389509 - L1PB3 LINE L1 -522 5632 5485 838 127 16 0 chr2 109298348 109298474 -141389380 - AluSg/x SINE Alu -23 286 159 1104 84 36 10 chr2 109298474 109298707 -141389147 - L1PB3 LINE L1 -704 5450 5213 590 167 0 9 chr2 109298715 109298823 -141389031 - AluY SINE Alu -204 107 1 2232 109 0 3 chr2 109298940 109299255 -141388599 - AluY SINE Alu 0 311 1 437 267 235 34 chr2 109299291 109299964 -141387890 - L1PB3 LINE L1 -1131 5015 4153 480 209 157 0 chr2 109299964 109300079 -141387775 - FLAM_C SINE Alu 0 133 1 437 267 235 34 chr2 109300079 109300153 -141387701 - L1PB3 LINE L1 -1993 4153 4095 430 321 59 5 chr2 109300149 109300538 -141387316 - L1M4 LINE L1 -2388 3758 3349 * 2131 126 0 13 chr2 109300539 109300848 -141387006 - AluSx SINE Alu -7 305 1 280 270 57 62 chr2 109301063 109301433 -141386421 - HAL1 LINE L1 -2132 375 8 21 0 0 0 chr2 109301659 109301680 -141386174 + AT_rich Low_complexity Low_complexity 1 21 0 859 129 8 0 chr2 109303935 109304067 -141383787 - PABL_A LTR ERV1 -527 133 1 1170 146 0 0 chr2 109304067 109304231 -141383623 - AluJo SINE Alu -146 166 3 429 271 142 32 chr2 109304853 109305071 -141382783 + MIR SINE MIR 17 258 -4 2377 69 0 6 chr2 109305486 109305804 -141382050 - LTR66 LTR ERVL -294 316 1 1153 103 0 0 chr2 109305806 109305952 -141381902 - AluSq/x SINE Alu -167 146 1 4741 151 31 22 chr2 109305952 109306893 -141380961 - L1 LINE L1 -1502 4644 3696 1032 201 5 10 chr2 109306893 109307092 -141380762 - AluJb SINE Alu -3 309 112 272 344 62 0 chr2 109307326 109307422 -141380432 + MIR SINE MIR 48 149 -59 2495 76 0 0 chr2 109307646 109307950 -141379904 + AluY SINE Alu 1 304 -7 188 293 0 0 chr2 109308360 109308401 -141379453 - L2 LINE L2 -20 3293 3253 309 253 63 0 chr2 109308402 109308481 -141379373 - L1MC4a LINE L1 -1645 6163 6080 324 297 96 6 chr2 109308574 109308739 -141379115 - MIR SINE MIR -64 144 13 255 163 0 20 chr2 109308760 109308809 -141379045 + Alu SINE Alu 2 49 -254 1424 179 55 52 chr2 109309002 109309366 -141378488 + MLT1A1 LTR MaLR 1 365 0 588 215 61 66 chr2 109310418 109310576 -141377278 + MLT2D LTR ERVL 222 477 -43 5083 120 97 26 chr2 109310576 109310961 -141376893 - Tigger1 DNA MER2_type 0 2418 2062 1793 148 65 3 chr2 109310961 109311252 -141376602 - AluJo SINE Alu -3 309 1 5083 120 97 26 chr2 109311252 109311822 -141376032 - Tigger1 DNA MER2_type -356 2062 1395 3413 178 39 18 chr2 109311964 109312355 -141375499 + L1MB2 LINE L1 4887 5268 -903 2220 110 0 16 chr2 109312355 109312663 -141375191 + AluSg SINE Alu 1 303 -7 3413 178 39 18 chr2 109312663 109313295 -141374559 + L1MB2 LINE L1 5268 5941 -230 4543 147 36 29 chr2 109313296 109313674 -141374180 - MER6 DNA MER2_type -1 864 490 2183 137 0 6 chr2 109313674 109313988 -141373866 + AluSx SINE Alu 1 312 0 4543 147 36 29 chr2 109313988 109314463 -141373391 - MER6 DNA MER2_type -375 490 2 1103 150 40 53 chr2 109314463 109314649 -141373205 + L1MB2 LINE L1 5939 6123 -48 2313 99 0 0 chr2 109314649 109314943 -141372911 + AluSq SINE Alu 1 294 -19 1103 150 40 53 chr2 109314943 109314983 -141372871 + L1MB2 LINE L1 6123 6162 -9 472 249 99 44 chr2 109314986 109315167 -141372687 + MIR SINE MIR 2 192 -70 2193 113 3 0 chr2 109315776 109316069 -141371785 - AluSx SINE Alu -17 295 2 2338 98 3 3 chr2 109317097 109317403 -141370451 + AluSq SINE Alu 1 306 -7 804 134 21 0 chr2 109317788 109317930 -141369924 - L1MA4 LINE L1 0 6300 6156 4284 20 0 0 chr2 109319969 109320463 -141367391 - L1PA2 LINE L1 0 6155 5662 2818 29 0 0 chr2 109320463 109320812 -141367042 + L1P LINE L1 4734 5082 -1064 1867 149 0 4 chr2 109321291 109321567 -141366287 + AluSx SINE Alu 1 275 -37 181 30 91 0 chr2 109321573 109321606 -141366248 + (CAGAA)n Simple_repeat Simple_repeat 2 37 0 2418 78 0 13 chr2 109321836 109322142 -141365712 + AluY SINE Alu 1 302 -9 207 108 27 0 chr2 109322755 109322792 -141365062 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr2 109322912 109322933 -141364921 + AT_rich Low_complexity Low_complexity 1 21 0 4975 96 21 4 chr2 109323902 109324621 -141363233 - L1PA13 LINE L1 -5 6158 5428 2233 107 13 3 chr2 109324805 109325113 -141362741 - AluSx SINE Alu -1 311 1 2051 141 0 0 chr2 109325166 109325456 -141362398 - AluSx SINE Alu -22 290 1 1418 95 142 13 chr2 109325637 109325869 -141361985 - AluSx SINE Alu -15 297 36 1581 183 0 0 chr2 109326799 109327051 -141360803 - AluSx SINE Alu -60 252 1 607 227 40 126 chr2 109327262 109327509 -141360345 + MIR SINE MIR 4 229 -33 212 309 21 41 chr2 109327788 109327885 -141359969 + L2 LINE L2 3205 3299 -14 2232 96 10 0 chr2 109328226 109328529 -141359325 + AluSg SINE Alu 1 306 -4 1283 233 97 148 chr2 109329629 109330407 -141357447 + L2 LINE L2 1490 2214 -1100 2359 75 0 16 chr2 109330407 109330712 -141357142 - AluY SINE Alu -11 300 1 1283 233 97 148 chr2 109330712 109330864 -141356990 + L2 LINE L2 2214 2372 -942 253 260 83 0 chr2 109330946 109331042 -141356812 + MIR SINE MIR 87 190 -72 214 296 184 10 chr2 109331335 109331433 -141356421 + L2 LINE L2 3198 3312 -1 1700 102 11 4 chr2 109333326 109333592 -141354262 + PABL_A LTR ERV1 391 658 -2 628 126 165 0 chr2 109333593 109333696 -141354158 + AluJb SINE Alu 162 281 -31 253 125 36 0 chr2 109333697 109333753 -141354101 + CT-rich Low_complexity Low_complexity 1 58 0 188 286 132 44 chr2 109333956 109334047 -141353807 + MER5A DNA MER1_type 1 99 -90 2036 130 10 3 chr2 109334167 109334466 -141353388 - AluSq SINE Alu -12 301 1 791 201 34 112 chr2 109334543 109334937 -141352917 - L1MC5 LINE L1 -218 7743 7387 1912 82 4 22 chr2 109334937 109335205 -141352649 - AluSq SINE Alu -45 268 6 791 201 34 112 chr2 109335205 109335258 -141352596 - L1MC5 LINE L1 -574 7387 7331 332 138 35 0 chr2 109335260 109335318 -141352536 - Charlie1 DNA MER1_type -1 2760 2701 545 194 9 0 chr2 109335323 109335431 -141352423 + MLT-int LTR MaLR 1492 1600 -135 278 244 37 0 chr2 109335453 109335535 -141352319 - MER58 DNA MER1_type -251 90 6 248 278 24 32 chr2 109335552 109335678 -141352176 - L1MC5 LINE L1 -765 7196 7072 942 160 0 29 chr2 109335941 109336116 -141351738 - FRAM SINE Alu -5 171 2 297 275 0 0 chr2 109338727 109338796 -141349058 + L2 LINE L2 3245 3313 0 1712 92 0 4 chr2 109338954 109339183 -141348671 - AluSc SINE Alu 0 309 82 246 234 45 45 chr2 109339334 109339488 -141348366 + L1M4 LINE L1 4560 4713 -1433 24 32 0 0 chr2 109339711 109339742 -141348112 + AT_rich Low_complexity Low_complexity 1 31 0 2373 87 0 13 chr2 109339885 109340197 -141347657 + AluY SINE Alu 1 308 -3 2390 75 0 3 chr2 109340207 109340500 -141347354 + AluY SINE Alu 3 294 -17 1889 122 23 43 chr2 109340510 109340814 -141347040 + AluJo SINE Alu 1 298 -14 530 239 54 0 chr2 109340821 109340951 -141346903 - L1MB7 LINE L1 -11 6173 6037 323 146 55 6 chr2 109340963 109341127 -141346727 + (TA)n Simple_repeat Simple_repeat 1 172 0 369 0 0 0 chr2 109341161 109341202 -141346652 + (CA)n Simple_repeat Simple_repeat 1 41 0 604 161 81 48 chr2 109341351 109341475 -141346379 - AluJb SINE Alu -183 129 2 2444 213 55 29 chr2 109341478 109341886 -141345968 - L1 LINE L1 -2450 3696 3300 1160 135 262 37 chr2 109341886 109342130 -141345724 - AluSx SINE Alu 0 302 4 2444 213 55 29 chr2 109342130 109342565 -141345289 - L1 LINE L1 -2846 3300 2805 1436 179 75 4 chr2 109342568 109342848 -141345006 + MER58B DNA MER1_type 42 341 0 743 292 88 53 chr2 109343395 109343827 -141344027 + LTR67 LTR ERVL 101 547 -10 29 0 0 0 chr2 109343862 109343891 -141343963 + AT_rich Low_complexity Low_complexity 1 29 0 207 234 21 0 chr2 109344950 109344997 -141342857 - L2 LINE L2 0 3313 3266 1294 146 24 9 chr2 109345370 109345583 -141342271 + MLT1A1 LTR MaLR 1 216 -149 2430 64 0 3 chr2 109346698 109346994 -141340860 - AluSc SINE Alu -14 295 1 225 309 107 0 chr2 109347196 109347280 -141340574 + MIR SINE MIR 119 211 -51 21 36 0 0 chr2 109348223 109348251 -141339603 + AT_rich Low_complexity Low_complexity 1 28 0 2330 76 0 3 chr2 109348251 109348539 -141339315 + AluY SINE Alu 1 287 -24 423 0 0 0 chr2 109348539 109348586 -141339268 + (TG)n Simple_repeat Simple_repeat 2 48 0 833 157 8 30 chr2 109348604 109348738 -141339116 - FLAM_C SINE Alu -11 132 2 524 262 75 79 chr2 109348740 109349222 -141338632 - L1MC5 LINE L1 -48 7913 7450 530 219 13 26 chr2 109349235 109349420 -141338434 - L1MD3 LINE L1 0 8039 7726 586 306 62 19 chr2 109349513 109349722 -141338132 + MIR SINE MIR 32 249 -13 1508 145 8 0 chr2 109349988 109350223 -141337631 + AluJb SINE Alu 1 237 -75 716 138 17 22 chr2 109350228 109350409 -141337445 + (TA)n Simple_repeat Simple_repeat 1 180 0 351 161 51 22 chr2 109350520 109350657 -141337197 + (TA)n Simple_repeat Simple_repeat 1 141 0 224 178 0 52 chr2 109350671 109350806 -141337048 + (TA)n Simple_repeat Simple_repeat 1 128 0 31 44 0 0 chr2 109350831 109350876 -141336978 + AT_rich Low_complexity Low_complexity 1 45 0 189 109 55 0 chr2 109350891 109350946 -141336908 + (TA)n Simple_repeat Simple_repeat 1 58 0 252 0 0 0 chr2 109350987 109351015 -141336839 + (TG)n Simple_repeat Simple_repeat 2 29 0 1459 178 91 4 chr2 109351015 109351279 -141336575 - AluJb SINE Alu -25 287 1 224 308 51 0 chr2 109351883 109351961 -141335893 - MIR3 SINE MIR 0 208 127 232 287 72 121 chr2 109352338 109352498 -141335356 - MIR SINE MIR -59 149 18 434 241 184 35 chr2 109353244 109353385 -141334469 + MER5A DNA MER1_type 26 187 -2 663 269 21 33 chr2 109353688 109353930 -141333924 + MLT1L LTR MaLR 368 606 -9 203 133 0 0 chr2 109354264 109354294 -141333560 + MIR SINE MIR 113 142 -66 2846 131 131 40 chr2 109354386 109354942 -141332912 - L1MB4 LINE L1 0 6180 5574 3170 56 56 2 chr2 109355039 109355450 -141332404 + LTR3b LTR ERVK 1 433 -4 1868 148 4 0 chr2 109355501 109355779 -141332075 - AluJo SINE Alu -33 279 1 2048 133 3 0 chr2 109355923 109356216 -141331638 - AluSx SINE Alu -16 296 3 2332 82 27 0 chr2 109356617 109356909 -141330945 - AluY SINE Alu -9 302 3 2339 105 0 6 chr2 109357059 109357373 -141330481 - AluSx SINE Alu 0 312 1 235 203 17 34 chr2 109358274 109358333 -141329521 - L2 LINE L2 -25 3288 3231 1350 275 74 41 chr2 109358552 109359247 -141328607 + L2 LINE L2 2587 3309 -4 875 86 16 15 chr2 109359559 109359699 -141328155 - L1M4 LINE L1 -568 5598 5473 441 291 9 11 chr2 109359715 109359863 -141327991 - MIR SINE MIR -63 145 52 213 216 20 0 chr2 109359869 109359920 -141327934 + (TG)n Simple_repeat Simple_repeat 2 53 0 8999 123 22 20 chr2 109359937 109360139 -141327715 + Tigger1 DNA MER2_type 24 224 -2194 2359 92 0 7 chr2 109360139 109360444 -141327410 - AluSc SINE Alu -6 303 1 8999 123 22 20 chr2 109360444 109361621 -141326233 + Tigger1 DNA MER2_type 224 1405 -1013 2246 106 3 0 chr2 109361906 109362198 -141325656 + AluSx SINE Alu 1 293 -19 249 311 16 0 chr2 109362879 109362940 -141324914 - L2 LINE L2 -95 3177 3116 2142 116 0 10 chr2 109364138 109364441 -141323413 - AluSg SINE Alu -10 300 1 837 208 186 25 chr2 109364748 109365027 -141322827 - MER5C DNA MER1_type 0 324 1 237 65 0 0 chr2 109365049 109365080 -141322774 + (TTTTC)n Simple_repeat Simple_repeat 5 35 0 224 326 31 39 chr2 109365177 109365306 -141322548 - MIR SINE MIR -6 256 129 636 325 46 20 chr2 109365329 109365634 -141322220 - L2 LINE L2 -6 3307 2995 391 288 17 17 chr2 109366406 109366557 -141321297 - MIR SINE MIR -67 141 15 675 134 62 0 chr2 109368022 109368147 -141319707 - FLAM_A SINE Alu 0 143 13 2305 100 0 0 chr2 109368165 109368456 -141319398 - AluSg SINE Alu -19 291 1 188 292 31 46 chr2 109368498 109368563 -141319291 - L2 LINE L2 -68 3204 3141 234 273 141 20 chr2 109368874 109368973 -141318881 + L2 LINE L2 3139 3249 -23 2148 94 0 21 chr2 109369650 109369964 -141317890 - AluSg SINE Alu 0 308 1 2438 85 0 3 chr2 109370343 109370649 -141317205 - AluY SINE Alu -6 305 1 240 238 88 0 chr2 109371189 109371269 -141316585 - L1ME3A LINE L1 0 6170 6084 203 247 78 0 chr2 109371430 109371507 -141316347 - L2 LINE L2 -2 3270 3188 352 311 81 43 chr2 109372296 109372618 -141315236 - L2 LINE L2 -657 2657 2324 741 329 26 10 chr2 109372992 109373296 -141314558 + MER93a LTR ERV1 91 399 -3 2336 101 3 0 chr2 109373410 109373717 -141314137 + AluSq SINE Alu 1 308 -5 388 272 13 70 chr2 109373963 109374121 -141313733 + MER20B DNA MER1_type 3 151 -632 1875 164 3 20 chr2 109374241 109374545 -141313309 + AluSx SINE Alu 1 299 -13 262 289 72 0 chr2 109374553 109374650 -141313204 + MER20B DNA MER1_type 280 383 -400 188 33 0 33 chr2 109374779 109374809 -141313045 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1938 101 25 39 chr2 109374811 109375097 -141312757 - AluSq SINE Alu -31 282 1 2168 118 10 0 chr2 109375451 109375748 -141312106 - AluSx SINE Alu -12 300 1 234 337 32 32 chr2 109375958 109376053 -141311801 - L2 LINE L2 -20 3252 3158 185 306 71 24 chr2 109376136 109376221 -141311633 + MIR SINE MIR 82 170 -92 807 129 17 0 chr2 109376625 109376741 -141311113 + AluSq/x SINE Alu 2 119 -194 1015 82 0 15 chr2 109376848 109376982 -141310872 - AluY SINE Alu -179 132 1 2114 100 0 29 chr2 109377096 109377407 -141310447 + AluSg SINE Alu 1 302 -8 1841 207 13 30 chr2 109377416 109377875 -141309979 + L1MB7 LINE L1 4083 4533 -1613 911 149 0 8 chr2 109377907 109378041 -141309813 + FLAM_C SINE Alu 1 133 0 1836 185 24 60 chr2 109378053 109378159 -141309695 + L1MB7 LINE L1 5680 5788 -396 733 142 10 178 chr2 109378159 109378356 -141309498 + FAM SINE Alu 5 168 -7 1836 185 24 60 chr2 109378356 109378702 -141309152 + L1MB7 LINE L1 5788 6116 -68 249 353 0 15 chr2 109378732 109378865 -141308989 - L1MDb LINE L1 -5514 895 765 1852 139 20 26 chr2 109380314 109380617 -141307237 - AluJb SINE Alu -11 301 1 235 105 0 26 chr2 109381307 109381345 -141306509 + Alu SINE Alu 1 37 -96 1701 124 0 0 chr2 109381352 109381577 -141306277 - AluSx SINE Alu -85 227 3 24 0 0 0 chr2 109381591 109381615 -141306239 + AT_rich Low_complexity Low_complexity 1 24 0 2517 47 0 17 chr2 109382254 109382555 -141305299 - AluY SINE Alu -15 296 1 2221 85 24 0 chr2 109382706 109383000 -141304854 - AluY SINE Alu -10 301 1 23 54 0 0 chr2 109385326 109385363 -141302491 + AT_rich Low_complexity Low_complexity 1 37 0 1165 164 32 27 chr2 109385485 109385704 -141302150 - AluJo SINE Alu -9 303 84 22 0 0 0 chr2 109385833 109385855 -141301999 + AT_rich Low_complexity Low_complexity 1 22 0 2069 97 45 7 chr2 109386525 109386814 -141301040 - AluSg SINE Alu -10 300 1 1479 150 120 8 chr2 109387139 109387406 -141300448 - AluJo SINE Alu -15 297 1 1988 142 0 52 chr2 109388480 109388657 -141299197 - AluJb SINE Alu -5 307 153 2458 77 7 0 chr2 109388657 109388956 -141298898 - AluSc SINE Alu -8 301 1 1988 142 0 52 chr2 109388956 109389102 -141298752 - AluJb SINE Alu -159 153 1 1648 160 49 3 chr2 109389123 109389410 -141298444 - AluJo SINE Alu -12 300 1 1197 152 181 74 chr2 109389427 109389547 -141298307 + MER2 DNA MER2_type 1 107 -237 2170 116 0 7 chr2 109389547 109389848 -141298006 - AluSq SINE Alu -14 299 1 1197 152 181 74 chr2 109389848 109390037 -141297817 + MER2 DNA MER2_type 107 343 -1 940 252 152 78 chr2 109391292 109392227 -141295627 + L1MC4 LINE L1 7039 8042 0 1724 170 97 30 chr2 109393530 109393901 -141293953 + MSTD LTR MaLR 1 396 0 2433 81 7 0 chr2 109394296 109394604 -141293250 - AluY SINE Alu -1 310 1 2372 76 0 10 chr2 109394695 109394999 -141292855 - AluY SINE Alu -10 301 1 1818 163 3 20 chr2 109395356 109395657 -141292197 + AluJo SINE Alu 1 296 -16 311 259 113 85 chr2 109395667 109395914 -141291940 + L1MC4 LINE L1 7789 8042 0 2280 69 52 0 chr2 109396856 109397147 -141290707 - AluSp SINE Alu -7 306 1 2093 111 11 0 chr2 109397877 109398156 -141289698 - AluSq SINE Alu -31 282 1 253 256 23 23 chr2 109398624 109398710 -141289144 - Charlie2a DNA MER1_type -61 2801 2716 607 208 8 8 chr2 109398710 109398830 -141289024 - FLAM_C SINE Alu -11 132 13 1293 197 124 85 chr2 109398862 109399507 -141288347 - Charlie2a DNA MER1_type -248 2614 1945 524 232 99 7 chr2 109399500 109399627 -141288227 - Charlie2a DNA MER1_type -1217 1645 1500 * 2178 109 14 3 chr2 109399627 109399920 -141287934 - AluSx SINE Alu -16 296 1 524 232 99 7 chr2 109399920 109399943 -141287911 - Charlie2a DNA MER1_type -1362 1500 1481 834 189 94 74 chr2 109399952 109399965 -141287889 - Charlie2a DNA MER1_type -1487 1375 1364 665 214 16 0 chr2 109399965 109400091 -141287763 - FLAM_A SINE Alu -4 129 2 834 189 94 74 chr2 109400091 109400281 -141287573 - Charlie2a DNA MER1_type -1498 1364 1179 4314 114 24 29 chr2 109400281 109400981 -141286873 + L1MA6 LINE L1 5604 6300 0 834 189 94 74 chr2 109400981 109401000 -141286854 - Charlie2a DNA MER1_type -1683 1179 1162 1039 168 69 132 chr2 109401000 109401363 -141286491 - MER2 DNA MER2_type -4 340 1 834 189 94 74 chr2 109401363 109401572 -141286282 - Charlie2a DNA MER1_type -1700 1162 933 433 236 38 0 chr2 109401592 109401698 -141286156 + MIR SINE MIR 12 121 -141 2720 179 36 11 chr2 109401759 109402227 -141285627 + MER21B LTR ERV1 1 480 -383 1770 179 13 3 chr2 109402227 109402534 -141285320 - AluJo SINE Alu -2 310 1 940 209 0 0 chr2 109402562 109402725 -141285129 + AluJb SINE Alu 136 298 -14 1607 186 104 14 chr2 109402735 109403089 -141284765 + MER21B LTR ERV1 474 859 -4 491 248 16 8 chr2 109403099 109403220 -141284634 - Charlie2a DNA MER1_type -2235 627 506 2312 110 3 0 chr2 109403221 109403529 -141284325 + AluSg SINE Alu 1 309 -1 1782 157 69 0 chr2 109403586 109403904 -141283950 + MER7A DNA MER2_type 1 338 -8 350 192 443 5 chr2 109403912 109404115 -141283739 - Charlie2a DNA MER1_type -2384 478 187 2204 117 3 0 chr2 109404991 109405300 -141282554 + AluSp SINE Alu 1 310 -3 1563 150 16 28 chr2 109405682 109405935 -141281919 + AluJb SINE Alu 60 309 -3 212 208 0 38 chr2 109407681 109407734 -141280120 + GA-rich Low_complexity Low_complexity 2 52 0 1948 153 34 0 chr2 109408321 109408616 -141279238 + AluJo SINE Alu 1 305 -7 306 262 19 47 chr2 109410061 109410168 -141277686 - MIR SINE MIR -64 144 41 2194 118 3 0 chr2 109410431 109410728 -141277126 + AluSq SINE Alu 9 306 -7 1547 192 95 31 chr2 109411837 109412227 -141275627 + Charlie1 DNA MER1_type 2347 2761 0 315 0 0 0 chr2 109412691 109412726 -141275128 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 2907 116 7 12 chr2 109414836 109415423 -141272431 + MER4A LTR ERV1 1 664 0 480 262 195 0 chr2 109415679 109415828 -141272026 - MIR SINE MIR -75 187 10 1799 229 96 19 chr2 109416296 109416923 -141270931 - L1MD2 LINE L1 -84 6275 5565 1477 189 165 5 chr2 109416923 109417299 -141270555 + MER21B LTR ERV1 13 448 -415 225 94 0 0 chr2 109418162 109418194 -141269660 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2276 93 3 28 chr2 109418319 109418640 -141269214 + AluSq SINE Alu 1 313 0 32721 97 19 65 chr2 109419067 109422024 -141265830 - L1PA7 LINE L1 -5 6149 3656 2320 41 3 54 chr2 109422024 109422350 -141265504 + AluY SINE Alu 1 311 0 32721 97 19 65 chr2 109422350 109425838 -141262016 - L1PA7 LINE L1 -2498 3656 12 2841 16 0 0 chr2 109426386 109426697 -141261157 + AluY SINE Alu 1 311 0 2611 160 24 8 chr2 109427899 109428394 -141259460 + L1MA5 LINE L1 5794 6296 -4 243 262 92 50 chr2 109429189 109429294 -141258560 - L1ME4a LINE L1 -53 6068 5954 2280 114 0 0 chr2 109429294 109429592 -141258262 + AluSg SINE Alu 1 298 -12 243 262 92 50 chr2 109429592 109429627 -141258227 - L1ME4a LINE L1 -167 5954 5922 189 281 78 0 chr2 109429777 109429841 -141258013 + L2 LINE L2 2996 3064 -208 2342 88 0 0 chr2 109429989 109430283 -141257571 - AluY SINE Alu -17 294 1 2169 110 3 10 chr2 109430292 109430583 -141257271 - AluSx SINE Alu -23 289 1 1767 135 60 3 chr2 109430899 109431181 -141256673 + AluJb SINE Alu 1 298 -14 423 0 0 0 chr2 109431898 109431945 -141255909 + (CA)n Simple_repeat Simple_repeat 2 48 0 1190 226 174 58 chr2 109432469 109433089 -141254765 + LTR41 LTR ERVL 76 767 -6 1875 107 55 0 chr2 109433334 109433587 -141254267 - AluSg1 SINE Alu -19 290 24 2212 121 10 0 chr2 109433591 109433896 -141253958 - AluSq SINE Alu -5 308 1 25 51 0 0 chr2 109435204 109435243 -141252611 + AT_rich Low_complexity Low_complexity 1 39 0 2098 125 3 0 chr2 109436774 109437070 -141250784 + AluSq SINE Alu 1 297 -16 1115 241 109 35 chr2 109437082 109437459 -141250395 - LTR47B LTR ERVL 0 443 39 271 192 19 0 chr2 109437490 109437542 -141250312 - LTR47A LTR ERVL -399 53 1 2144 135 3 3 chr2 109438822 109439134 -141248720 - AluJb SINE Alu 0 312 1 595 140 211 0 chr2 109440114 109440228 -141247626 + AluJb SINE Alu 159 296 -16 1722 74 14 0 chr2 109440280 109440496 -141247358 + AluSx SINE Alu 1 219 -93 772 277 33 15 chr2 109440883 109441154 -141246700 + MLT1C LTR MaLR 192 467 0 180 0 0 0 chr2 109441624 109441644 -141246210 + (A)n Simple_repeat Simple_repeat 1 20 0 1558 153 20 140 chr2 109441756 109442149 -141245705 - Tigger3(Golem) DNA MER2_type -1 3028 2 215 283 0 0 chr2 109443070 109443116 -141244738 + L2 LINE L2 3214 3259 -13 1662 185 55 9 chr2 109443618 109443943 -141243911 - MER58B DNA MER1_type 0 341 2 1947 131 10 3 chr2 109443950 109444248 -141243606 - AluSx SINE Alu -12 300 1 2127 117 0 0 chr2 109444265 109444570 -141243284 - AluSx SINE Alu 0 305 1 201 242 306 0 chr2 109445432 109445494 -141242360 + L2 LINE L2 3171 3251 -21 27 29 0 0 chr2 109446187 109446221 -141241633 + AT_rich Low_complexity Low_complexity 1 34 0 2128 109 0 0 chr2 109449335 109449643 -141238211 - AluSx SINE Alu 0 308 1 2391 77 3 3 chr2 109450200 109450500 -141237354 - AluSc SINE Alu -9 300 1 250 243 27 169 chr2 109450870 109451018 -141236836 - L3 LINE CR1 -33 1544 1418 223 406 65 6 chr2 109451212 109451382 -141236472 + L2 LINE L2 2881 3060 -212 1783 158 6 22 chr2 109452535 109452846 -141235008 + AluJo SINE Alu 1 306 -6 217 317 67 39 chr2 109455028 109455132 -141232722 - L2 LINE L2 -86 3186 3080 548 296 82 5 chr2 109455879 109456075 -141231779 - MIR SINE MIR -51 211 1 231 36 0 0 chr2 109456962 109456990 -141230864 + (TA)n Simple_repeat Simple_repeat 2 29 0 * 282 56 0 0 chr2 109456989 109457025 -141230829 + (TG)n Simple_repeat Simple_repeat 1 36 0 679 237 24 79 chr2 109457127 109457418 -141230436 - L1MC4 LINE L1 -980 7062 6788 * 734 211 52 68 chr2 109457416 109457541 -141230313 - L1MCb LINE L1 -3693 2872 2747 1706 177 0 37 chr2 109457541 109457863 -141229991 - AluJo SINE Alu -2 310 1 734 211 52 68 chr2 109457863 109457926 -141229928 - L1MCb LINE L1 -3818 2747 2685 2008 127 0 0 chr2 109457926 109458202 -141229652 - AluY SINE Alu -25 286 11 734 211 52 68 chr2 109458202 109458403 -141229451 - L1MCb LINE L1 -3880 2685 2528 314 145 101 14 chr2 109458388 109458457 -141229397 - L1MCb LINE L1 -5114 1453 1379 * 2113 147 21 50 chr2 109458458 109458894 -141228960 - L1MC2 LINE L1 0 6344 5922 1320 212 4 4 chr2 109458909 109459187 -141228667 - L1M4 LINE L1 -905 5659 5382 2201 111 0 3 chr2 109459213 109459510 -141228344 + AluSq SINE Alu 4 299 -14 2087 248 80 48 chr2 109459511 109459591 -141228263 - L1MCb LINE L1 -4909 1136 1060 1889 201 37 3 chr2 109459591 109459940 -141227914 - MLT1A1 LTR MaLR -3 362 2 2087 248 80 48 chr2 109459940 109460015 -141227839 - L1MCb LINE L1 -4985 1060 989 2506 87 0 0 chr2 109460015 109460325 -141227529 - AluY SINE Alu -1 310 1 2087 248 80 48 chr2 109460325 109460953 -141226901 - L1MCb LINE L1 -5056 989 721 288 179 0 0 chr2 109460961 109461017 -141226837 + L1MD3 LINE L1 7581 7636 -359 679 224 78 10 chr2 109461028 109461220 -141226634 + L1MD3 LINE L1 7746 7950 -45 362 236 11 56 chr2 109461279 109461368 -141226486 - L1MD3 LINE L1 -1428 6567 6483 2021 139 16 3 chr2 109461595 109461898 -141225956 + AluSx SINE Alu 1 307 -5 1044 144 0 0 chr2 109461903 109462086 -141225768 + AluSg/x SINE Alu 129 311 0 2410 68 0 0 chr2 109462499 109462793 -141225061 - AluY SINE Alu -17 294 1 1386 177 13 0 chr2 109462793 109463068 -141224786 - MER33 DNA MER1_type -52 272 1 1986 100 50 7 chr2 109463431 109463711 -141224143 - AluSx SINE Alu -15 297 6 729 169 130 13 chr2 109464605 109464759 -141223095 - AluJb SINE Alu -4 308 137 198 118 0 0 chr2 109465228 109465262 -141222592 + (A)n Simple_repeat Simple_repeat 1 34 0 1685 163 14 10 chr2 109465371 109465660 -141222194 - AluJb SINE Alu -18 294 5 1860 237 86 10 chr2 109466173 109466612 -141221242 - L1ME1 LINE L1 -5 6161 5680 500 167 20 10 chr2 109466612 109466714 -141221140 - L1MB7 LINE L1 -1 6183 6081 1860 237 86 10 chr2 109466714 109466763 -141221091 - L1ME1 LINE L1 -486 5680 5636 395 78 164 8 chr2 109466922 109467001 -141220853 - MLT1E LTR MaLR -7 577 449 796 146 0 66 chr2 109467292 109467429 -141220425 + AluSq/x SINE Alu 19 146 -166 2282 82 7 13 chr2 109467429 109467732 -141220122 + AluY SINE Alu 1 301 -10 1779 160 0 35 chr2 109467741 109468053 -141219801 + AluJb SINE Alu 1 301 -11 190 205 51 0 chr2 109468175 109468214 -141219640 + MIR SINE MIR 30 70 -138 2318 106 0 0 chr2 109468437 109468740 -141219114 - AluY SINE Alu -8 303 1 237 289 36 24 chr2 109468789 109468872 -141218982 - MIR SINE MIR -113 149 66 1947 137 3 10 chr2 109469459 109469759 -141218095 - AluSx SINE Alu -14 298 1 2020 115 14 11 chr2 109470355 109470641 -141217213 - AluSc SINE Alu -22 287 1 2117 30 0 0 chr2 109470852 109471085 -141216769 + AluY SINE Alu 70 302 -9 1593 104 13 13 chr2 109472572 109472802 -141215052 + AluY SINE Alu 1 230 -81 1927 198 68 25 chr2 109472802 109473242 -141214612 - LTR2B LTR ERV1 0 490 32 40310 68 7 6 chr2 109473261 109478340 -141209514 - Harlequin LTR ERV1 0 6896 1814 9576 67 11 117 chr2 109478327 109479907 -141207947 - Harlequin LTR ERV1 -5484 1412 1 * 1943 190 68 32 chr2 109479907 109480350 -141207504 - LTR2B LTR ERV1 0 490 32 612 68 0 0 chr2 109480367 109480441 -141207413 + AluY SINE Alu 223 296 -13 247 254 151 8 chr2 109480450 109480576 -141207278 + L1MC/D LINE L1 5678 5821 -1987 * 3273 147 9 29 chr2 109480568 109481034 -141206820 + L1MB2 LINE L1 5362 5817 -354 2354 104 0 0 chr2 109481034 109481341 -141206513 + AluSq SINE Alu 1 307 -6 3273 147 9 29 chr2 109481341 109481433 -141206421 + L1MB2 LINE L1 5817 5909 -262 2285 85 0 10 chr2 109481433 109481728 -141206126 + AluY SINE Alu 1 292 -19 233 253 11 42 chr2 109481737 109481832 -141206022 - L1ME4a LINE L1 -71 6050 5959 406 261 88 74 chr2 109481963 109482482 -141205372 - L1MC5 LINE L1 -139 7903 7393 734 0 0 11 chr2 109482482 109482569 -141205285 + (TTTC)n Simple_repeat Simple_repeat 3 88 0 2191 100 0 0 chr2 109482569 109482849 -141205005 - AluSq SINE Alu -33 280 1 406 261 88 74 chr2 109482849 109483130 -141204724 - L1MC5 LINE L1 -648 7394 7093 561 236 84 28 chr2 109483772 109483854 -141204000 + MER112 DNA MER1_type 67 143 -117 1323 213 6 53 chr2 109483854 109484173 -141203681 - AluJo SINE Alu -8 304 1 561 236 84 28 chr2 109484173 109484268 -141203586 + MER112 DNA MER1_type 143 254 -6 399 212 136 86 chr2 109484726 109485057 -141202797 - L1MEd LINE L1 -4772 1357 1009 2236 92 24 0 chr2 109485057 109485352 -141202502 - AluSq SINE Alu -11 302 1 399 212 136 86 chr2 109485352 109485430 -141202424 - L1MEd LINE L1 -5120 1009 936 335 154 77 0 chr2 109486155 109486220 -141201634 + L1MC5 LINE L1 7269 7338 -623 511 225 238 0 chr2 109486220 109486371 -141201483 + MER5A DNA MER1_type 2 188 -1 29 47 0 0 chr2 109486663 109486706 -141201148 + AT_rich Low_complexity Low_complexity 1 43 0 2049 102 32 3 chr2 109486715 109486999 -141200855 + AluSc SINE Alu 1 292 -17 2151 124 10 3 chr2 109487462 109487768 -141200086 - AluSc SINE Alu -1 308 1 2362 97 0 3 chr2 109489506 109489816 -141198038 + AluSc SINE Alu 1 309 0 232 244 87 17 chr2 109489863 109489978 -141197876 + L1MC5 LINE L1 7656 7778 -183 1904 79 4 4 chr2 109490584 109490824 -141197030 + AluY SINE Alu 1 240 -71 240 244 61 70 chr2 109491405 109491520 -141196334 - MIR SINE MIR -80 182 69 21 57 0 0 chr2 109491902 109491937 -141195917 + AT_rich Low_complexity Low_complexity 1 35 0 2788 81 126 8 chr2 109491949 109492312 -141195542 + MLT2A1 LTR ERVL 1 416 -28 269 26 0 26 chr2 109492312 109492351 -141195503 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 2788 81 126 8 chr2 109492351 109492384 -141195470 + MLT2A1 LTR ERVL 416 444 0 2063 125 3 3 chr2 109492889 109493192 -141194662 + AluSg1 SINE Alu 1 303 -6 1814 176 3 3 chr2 109493612 109493908 -141193946 - AluSx SINE Alu -16 296 1 256 348 54 22 chr2 109493960 109494052 -141193802 - MIR SINE MIR -78 130 36 2374 62 3 0 chr2 109494612 109494900 -141192954 + AluY SINE Alu 1 289 -22 483 254 74 32 chr2 109495482 109495671 -141192183 + MER105 DNA DNA 2 198 -6 250 314 37 99 chr2 109495964 109496155 -141191699 - MER5A DNA MER1_type -7 182 4 219 36 0 0 chr2 109496209 109496237 -141191617 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 277 200 0 0 chr2 109497056 109497111 -141190743 + L2 LINE L2 3259 3313 0 472 249 99 44 chr2 109498201 109498382 -141189472 + MIR SINE MIR 2 192 -70 334 287 98 11 chr2 109498471 109498645 -141189209 - MIR SINE MIR -11 251 63 2674 26 0 3 chr2 109498864 109499172 -141188682 + AluY SINE Alu 1 307 -4 995 130 0 7 chr2 109499191 109499329 -141188525 + AluSx SINE Alu 1 137 -175 1157 159 0 0 chr2 109499753 109499942 -141187912 + AluSx SINE Alu 119 307 -2 3500 159 46 47 chr2 109499942 109500202 -141187652 + L1MB2 LINE L1 5392 5651 -520 2609 39 0 3 chr2 109500202 109500513 -141187341 - AluY SINE Alu 0 311 2 3500 159 46 47 chr2 109500513 109500916 -141186938 + L1MB2 LINE L1 5651 6056 -115 1601 201 7 7 chr2 109500916 109501220 -141186634 + AluJo SINE Alu 9 312 0 3500 159 46 47 chr2 109501220 109501295 -141186559 + L1MB2 LINE L1 6056 6130 -41 2315 57 23 20 chr2 109501295 109501596 -141186258 + AluY SINE Alu 1 302 -9 2203 105 7 0 chr2 109501606 109501902 -141185952 + AluSp SINE Alu 1 298 -15 2912 148 39 6 chr2 109502102 109502637 -141185217 - L1MA4 LINE L1 -192 6108 5556 2506 51 3 19 chr2 109502680 109502995 -141184859 + AluY SINE Alu 1 310 -1 2172 111 0 7 chr2 109503577 109503883 -141183971 + AluSx SINE Alu 1 304 -8 648 170 18 0 chr2 109504615 109504750 -141183104 + L1MC4 LINE L1 7693 8041 -1 22 56 0 0 chr2 109504926 109504962 -141182892 + AT_rich Low_complexity Low_complexity 1 36 0 659 228 81 64 chr2 109505033 109505132 -141182722 - L1ME LINE L1 -397 5765 5669 2367 45 0 21 chr2 109505132 109505448 -141182406 + AluY SINE Alu 1 310 0 659 228 81 64 chr2 109505448 109505645 -141182209 - L1ME LINE L1 -493 5669 5463 1902 70 112 28 chr2 109505671 109505958 -141181896 - AluY SINE Alu 0 311 1 2353 73 7 0 chr2 109505962 109506251 -141181603 - AluY SINE Alu -20 291 1 327 65 0 0 chr2 109506530 109506576 -141181278 + MADE1 DNA Mariner 3 48 -32 183 350 72 10 chr2 109507687 109507784 -141180070 - MIR SINE MIR -70 138 36 456 159 166 7 chr2 109507816 109507967 -141179887 - MER33 DNA MER1_type -1 362 188 1723 142 0 40 chr2 109507975 109508249 -141179605 + AluJo SINE Alu 4 266 -46 1295 83 6 0 chr2 109508319 109508488 -141179366 - AluSg/x SINE Alu -16 294 125 699 172 0 0 chr2 109508493 109508615 -141179239 - MER33 DNA MER1_type -202 122 1 297 253 40 0 chr2 109508883 109508958 -141178896 - MIR SINE MIR -1 261 184 2102 129 10 3 chr2 109509413 109509723 -141178131 - AluSx SINE Alu 0 312 1 2497 46 3 10 chr2 109510291 109510597 -141177257 - AluY SINE Alu -7 304 1 2365 70 0 3 chr2 109510599 109510897 -141176957 - AluSq SINE Alu -16 297 1 1952 214 83 46 chr2 109511052 109511808 -141176046 + L1MC4 LINE L1 7271 7995 0 641 129 29 72 chr2 109512642 109512781 -141175073 + FLAM_A SINE Alu 1 133 0 26 64 0 0 chr2 109515441 109515488 -141172366 + AT_rich Low_complexity Low_complexity 1 47 0 1767 157 33 16 chr2 109515671 109515977 -141171877 - AluJo SINE Alu -1 311 1 21 36 0 0 chr2 109517873 109517901 -141169953 + AT_rich Low_complexity Low_complexity 1 28 0 2059 92 28 21 chr2 109517912 109518025 -141169829 + AluSx SINE Alu 16 127 -185 2455 84 3 0 chr2 109518025 109518335 -141169519 + AluSp SINE Alu 1 311 -2 2059 92 28 21 chr2 109518335 109518503 -141169351 + AluSx SINE Alu 127 299 -13 642 183 17 0 chr2 109518504 109518619 -141169235 + AluSq SINE Alu 134 250 -63 1397 145 0 30 chr2 109518619 109518854 -141169000 + AluSg/x SINE Alu 85 312 0 2026 127 16 13 chr2 109519569 109519876 -141167978 + AluSx SINE Alu 1 308 -4 1980 153 0 10 chr2 109520004 109520311 -141167543 + AluJo SINE Alu 1 304 -8 269 241 0 76 chr2 109520399 109520478 -141167376 - MER5B DNA MER1_type -1 177 105 419 309 105 35 chr2 109521396 109521710 -141166144 + L1M4 LINE L1 3652 3987 -2159 380 271 44 70 chr2 109523389 109523662 -141164192 + L1MDa LINE L1 19 284 -6256 * 991 219 130 16 chr2 109523653 109524042 -141163812 + L1M4 LINE L1 2666 3112 -3034 2008 100 53 17 chr2 109524042 109524343 -141163511 + AluSx SINE Alu 1 312 0 991 219 130 16 chr2 109524343 109524392 -141163462 + L1M4 LINE L1 3112 3154 -2992 556 251 119 51 chr2 109524408 109524552 -141163302 + L1M4 LINE L1 3511 3644 -2502 956 149 18 30 chr2 109524552 109524720 -141163134 - FAM SINE Alu -9 166 1 556 251 119 51 chr2 109524720 109524969 -141162885 + L1M4 LINE L1 3644 3931 -2215 303 118 59 0 chr2 109524977 109525028 -141162826 + L1MC1 LINE L1 6143 6196 -137 622 231 39 34 chr2 109525040 109525087 -141162767 - L1M4 LINE L1 -1490 4656 4611 2343 70 0 23 chr2 109525087 109525387 -141162467 + AluSc SINE Alu 1 293 -16 622 231 39 34 chr2 109525387 109525547 -141162307 - L1M4 LINE L1 -1535 4611 4448 1744 128 0 4 chr2 109525667 109525918 -141161936 + AluSq SINE Alu 53 302 -11 21 0 0 0 chr2 109526907 109526928 -141160926 + AT_rich Low_complexity Low_complexity 1 21 0 195 254 36 18 chr2 109526931 109526986 -141160868 + L2 LINE L2 3255 3310 -3 987 143 64 75 chr2 109528094 109528388 -141159466 + MER33 DNA MER1_type 1 274 -50 216 0 0 0 chr2 109528388 109528412 -141159442 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 827 210 0 7 chr2 109528412 109528555 -141159299 - FRAM SINE Alu -30 146 5 376 305 106 0 chr2 109528724 109528865 -141158989 + MIR3 SINE MIR 45 200 -8 1901 162 0 3 chr2 109529986 109530283 -141157571 - AluSx SINE Alu -16 296 1 844 94 86 0 chr2 109535936 109536064 -141151790 + MER85 DNA T2_type 1 139 0 297 51 0 0 chr2 109536196 109536235 -141151619 + (ATG)n Simple_repeat Simple_repeat 1 39 0 984 203 31 51 chr2 109536237 109536493 -141151361 - MIR SINE MIR -10 252 2 30 0 0 0 chr2 109537898 109537928 -141149926 + AT_rich Low_complexity Low_complexity 1 30 0 386 246 121 60 chr2 109538596 109538828 -141149026 + L1ME4a LINE L1 5773 6018 -103 294 322 25 26 chr2 109538959 109539132 -141148722 + MIR SINE MIR 24 197 -58 622 284 57 24 chr2 109539636 109539847 -141148007 + MIR SINE MIR 24 241 -21 23 54 0 0 chr2 109540631 109540668 -141147186 + AT_rich Low_complexity Low_complexity 1 37 0 1964 132 14 10 chr2 109540720 109541016 -141146838 - AluSx SINE Alu -13 299 3 354 328 57 8 chr2 109542240 109542362 -141145492 - MIR SINE MIR -57 151 24 2130 110 0 0 chr2 109543010 109543291 -141144563 + AluSx SINE Alu 1 301 0 181 0 0 0 chr2 109543291 109543311 -141144543 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1758 177 7 13 chr2 109543341 109543640 -141144214 + AluJb SINE Alu 1 297 -15 229 267 0 0 chr2 109544271 109544346 -141143508 + T-rich Low_complexity Low_complexity 1 75 0 963 166 17 11 chr2 109545266 109545441 -141142413 + AluSg/x SINE Alu 132 307 -3 2345 57 0 67 chr2 109546227 109546543 -141141311 - AluY SINE Alu -16 295 1 201 164 73 73 chr2 109546840 109546895 -141140959 - MIR SINE MIR -21 241 187 1671 93 0 5 chr2 109548214 109548477 -141139377 + AluSg/x SINE Alu 70 331 0 583 284 92 4 chr2 109548483 109548754 -141139100 + L1ME4a LINE L1 5533 5827 -294 239 216 0 0 chr2 109548840 109548877 -141138977 + AluJo SINE Alu 1 37 -263 2194 97 14 0 chr2 109548877 109549166 -141138688 - AluSx SINE Alu -19 293 1 1558 168 4 8 chr2 109549166 109549428 -141138426 + AluJo SINE Alu 26 286 -26 2255 108 3 3 chr2 109549436 109549743 -141138111 + AluSq SINE Alu 1 307 -6 259 226 32 0 chr2 109549799 109549861 -141137993 + L1ME4a LINE L1 5978 6041 -80 201 304 21 139 chr2 109550458 109550513 -141137341 - MER5A DNA MER1_type -6 172 112 2223 92 0 44 chr2 109550513 109550828 -141137026 + AluY SINE Alu 1 301 -10 201 304 21 139 chr2 109550828 109550901 -141136953 - MER5A DNA MER1_type -66 112 72 1982 158 33 9 chr2 109550901 109551237 -141136617 + L1MB8 LINE L1 5820 6163 -15 201 304 21 139 chr2 109551237 109551301 -141136553 - MER5A DNA MER1_type -106 72 2 1981 129 0 32 chr2 109552514 109552825 -141135029 + AluSx SINE Alu 4 304 -8 1935 141 20 23 chr2 109552826 109553132 -141134722 + AluJb SINE Alu 1 305 -7 404 341 150 12 chr2 109553435 109553681 -141134173 + L3 LINE CR1 1209 1488 -89 666 268 138 59 chr2 109553735 109554212 -141133642 + L1MC4a LINE L1 5520 6034 -1774 374 298 42 48 chr2 109554565 109554610 -141133244 - L3 LINE CR1 -1037 540 496 2211 106 3 10 chr2 109554610 109554912 -141132942 - AluSx SINE Alu -12 300 1 374 298 42 48 chr2 109554912 109555034 -141132820 - L3 LINE CR1 -1081 496 374 1746 139 10 31 chr2 109555455 109555743 -141132111 + AluJo SINE Alu 1 282 -30 252 227 0 0 chr2 109555769 109555813 -141132041 + AluJ/monomer SINE Alu 1 44 -259 493 169 39 0 chr2 109555814 109555891 -141131963 + AluJo/FRAM SINE Alu 198 277 -35 2435 78 0 3 chr2 109555945 109556251 -141131603 + AluY SINE Alu 1 305 -6 2165 112 0 7 chr2 109556430 109556726 -141131128 + AluSc SINE Alu 1 294 -15 2240 74 7 7 chr2 109556737 109557033 -141130821 + AluSp SINE Alu 1 296 -17 189 0 0 0 chr2 109557201 109557222 -141130632 + (A)n Simple_repeat Simple_repeat 1 21 0 2430 76 0 22 chr2 109557222 109557538 -141130316 + AluY SINE Alu 1 309 -2 2247 97 7 10 chr2 109557538 109557847 -141130007 + AluSc SINE Alu 1 308 -1 21 57 0 0 chr2 109558604 109558639 -141129215 + AT_rich Low_complexity Low_complexity 1 35 0 2009 138 0 14 chr2 109559034 109559330 -141128524 - AluSg SINE Alu -18 292 1 1456 209 56 51 chr2 109559477 109559612 -141128242 + Charlie1b DNA MER1_type 13 146 -2615 2132 120 0 7 chr2 109559612 109559913 -141127941 - AluSc SINE Alu -10 299 1 1456 209 56 51 chr2 109559913 109560104 -141127750 + Charlie1b DNA MER1_type 146 344 -2417 2254 110 0 3 chr2 109560104 109560405 -141127449 + AluSq SINE Alu 1 300 -13 1456 209 56 51 chr2 109560405 109560508 -141127346 + Charlie1b DNA MER1_type 344 445 -78 533 117 0 106 chr2 109560509 109560603 -141127251 + AluSc SINE Alu 1 84 -225 1742 102 7 89 chr2 109560603 109560659 -141127195 + AluSc SINE Alu 29 88 -221 2458 58 0 0 chr2 109560659 109560950 -141126904 + AluY SINE Alu 1 291 -20 1742 102 7 89 chr2 109560950 109561020 -141126834 + AluSc SINE Alu 88 162 -147 2456 64 0 3 chr2 109561020 109561318 -141126536 + AluY SINE Alu 1 297 -14 1742 102 7 89 chr2 109561318 109561480 -141126374 + AluSc SINE Alu 162 295 -14 1649 97 58 0 chr2 109561480 109561706 -141126148 + AluSc SINE Alu 71 309 0 1742 102 7 89 chr2 109561706 109561718 -141126136 + AluSc SINE Alu 295 306 -3 236 188 159 0 chr2 109561720 109561789 -141126065 + Charlie1b DNA MER1_type 436 515 -8 770 236 84 10 chr2 109562008 109562211 -141125643 - MER58A DNA MER1_type -6 218 1 335 261 92 26 chr2 109563740 109563893 -141123961 + L2 LINE L2 87 249 -3065 671 179 0 26 chr2 109564060 109564177 -141123677 - AluJo SINE Alu -113 199 86 441 171 57 0 chr2 109565513 109565601 -141122253 + L1MD2 LINE L1 5678 5770 -589 996 172 0 11 chr2 109565602 109565776 -141122078 + AluSg/x SINE Alu 135 306 -4 1313 172 106 57 chr2 109565778 109565910 -141121944 + L1MD2 LINE L1 5761 5885 -474 2255 114 0 0 chr2 109565910 109566216 -141121638 + AluSx SINE Alu 1 306 -6 1313 172 106 57 chr2 109566216 109566450 -141121404 + L1MD2 LINE L1 5885 6145 -214 498 196 49 55 chr2 109566449 109566503 -141121351 + L1MD3 LINE L1 7832 7885 -110 * 1627 118 35 4 chr2 109566503 109566732 -141121122 - MER46A DNA MER2_type 0 236 1 498 196 49 55 chr2 109566732 109566840 -141121014 + L1MD3 LINE L1 7885 7993 -2 200 321 37 37 chr2 109567141 109567250 -141120604 - L3 LINE CR1 -142 1435 1327 1412 199 7 17 chr2 109569015 109569316 -141118538 + AluJo SINE Alu 1 298 -14 2054 91 3 57 chr2 109570090 109570388 -141117466 + AluSx SINE Alu 1 282 -30 405 0 0 0 chr2 109570393 109570438 -141117416 + (CAT)n Simple_repeat Simple_repeat 1 45 0 1348 224 14 3 chr2 109570443 109570733 -141117121 + AluJo SINE Alu 1 293 -19 2145 117 10 0 chr2 109571131 109571430 -141116424 + AluSx SINE Alu 1 302 -10 1944 137 23 7 chr2 109571504 109571804 -141116050 - MER44D DNA MER2_type -31 574 398 5520 25 0 3 chr2 109571804 109572401 -141115453 + SVA Other Other 790 1384 -2 621 185 44 7 chr2 109572446 109572581 -141115273 + MLT1B LTR MaLR 205 344 -46 2309 200 7 2 chr2 109572604 109573009 -141114845 - MER44D DNA MER2_type -298 407 1 614 193 7 0 chr2 109573009 109573144 -141114710 + L1M4 LINE L1 4338 4473 -1673 309 74 0 37 chr2 109573163 109573217 -141114637 + AluSc SINE Alu 242 293 -6 1887 92 111 0 chr2 109573293 109573554 -141114300 - AluSc SINE Alu -19 290 1 313 282 59 0 chr2 109573718 109573803 -141114051 - MIR3 SINE MIR -54 154 65 250 125 0 0 chr2 109574055 109574095 -141113759 - Alu SINE Alu -6 294 255 374 229 268 0 chr2 109574284 109574467 -141113387 + HAL1 LINE L1 1113 1344 -1163 1281 258 145 26 chr2 109574489 109574648 -141113206 + HAL1 LINE L1 1480 1619 -888 1677 100 4 4 chr2 109574648 109574879 -141112975 + AluSg/x SINE Alu 76 306 -4 1281 258 145 26 chr2 109574879 109575113 -141112741 + HAL1 LINE L1 1619 1824 -683 252 0 0 0 chr2 109575113 109575141 -141112713 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 1281 258 145 26 chr2 109575141 109575394 -141112460 + HAL1 LINE L1 1824 2204 -303 2470 56 17 3 chr2 109575459 109575761 -141112093 + AluY SINE Alu 1 306 -5 585 252 8 0 chr2 109575872 109575995 -141111859 + FLAM_A SINE Alu 13 136 -6 1719 109 113 0 chr2 109576119 109576376 -141111478 - AluSg SINE Alu -5 305 20 1751 151 25 0 chr2 109577000 109577285 -141110569 + AluJb SINE Alu 1 292 -20 1708 142 16 26 chr2 109577289 109577598 -141110256 + AluJb SINE Alu 1 306 -6 2313 71 16 10 chr2 109577963 109578271 -141109583 - AluSx SINE Alu -2 310 1 258 290 274 16 chr2 109578307 109578493 -141109361 - MIR SINE MIR -5 257 24 2098 83 38 10 chr2 109579964 109580254 -141107600 + AluY SINE Alu 1 298 -13 856 136 173 86 chr2 109580323 109580385 -141107469 + MER8 DNA MER2_type 1 56 -183 2130 100 13 3 chr2 109580385 109580685 -141107169 + AluSx SINE Alu 2 304 -8 856 136 173 86 chr2 109580685 109580842 -141107012 + MER8 DNA MER2_type 56 239 0 956 195 0 6 chr2 109580863 109581027 -141106827 + FRAM SINE Alu 1 163 -3 263 211 100 11 chr2 109581330 109581420 -141106434 + L1ME4a LINE L1 6024 6121 0 189 311 158 58 chr2 109581444 109581634 -141106220 - L2 LINE L2 -820 2494 2286 590 274 13 6 chr2 109581659 109581816 -141106038 + FRAM SINE Alu 1 157 -19 1888 147 3 3 chr2 109581819 109582105 -141105749 + AluSx SINE Alu 1 286 -26 40 0 0 0 chr2 109582105 109582145 -141105709 + AT_rich Low_complexity Low_complexity 1 40 0 457 231 51 82 chr2 109582231 109582375 -141105479 - MIR SINE MIR 0 262 124 1877 154 3 19 chr2 109582375 109582687 -141105167 + AluJo SINE Alu 1 307 -5 457 231 51 82 chr2 109582687 109582737 -141105117 - MIR SINE MIR -138 124 74 2066 131 3 13 chr2 109582802 109583116 -141104738 - AluSx SINE Alu 0 312 2 498 54 27 27 chr2 109583335 109583409 -141104445 - L1MA9 LINE L1 0 6312 6239 603 225 0 0 chr2 109583414 109583525 -141104329 + Tigger1 DNA MER2_type 1 111 -2307 606 125 0 0 chr2 109583525 109583605 -141104249 - AluSx SINE Alu -18 292 213 2137 92 38 44 chr2 109583605 109583784 -141104070 + PABL_A LTR ERV1 1 179 -481 2221 119 0 0 chr2 109583784 109584079 -141103775 - AluSg SINE Alu -15 295 1 2137 92 38 44 chr2 109584079 109584216 -141103638 + PABL_A LTR ERV1 179 315 -345 679 128 0 43 chr2 109584216 109584333 -141103521 + AluY SINE Alu 183 294 -17 2689 61 3 0 chr2 109584333 109584659 -141103195 + PABL_A LTR ERV1 334 660 0 1660 97 0 14 chr2 109584659 109584875 -141102979 - AluSx SINE Alu -94 218 6 2974 129 11 11 chr2 109584879 109585330 -141102524 + Tigger1 DNA MER2_type 103 553 -1865 1053 121 25 61 chr2 109585328 109585485 -141102369 + Tigger1 DNA MER2_type 1286 1447 -971 * 2915 13 0 0 chr2 109585485 109585803 -141102051 - AluYb8 SINE Alu 0 318 1 1053 121 25 61 chr2 109585803 109585821 -141102033 + Tigger1 DNA MER2_type 1447 1456 -962 1903 69 4 12 chr2 109585821 109586066 -141101788 - AluSq SINE Alu -8 305 63 1053 121 25 61 chr2 109586066 109586087 -141101767 + Tigger1 DNA MER2_type 1456 1476 -942 679 163 104 0 chr2 109586825 109586960 -141100894 + Tigger1 DNA MER2_type 1442 1590 -828 1978 108 0 0 chr2 109586963 109587221 -141100633 + AluSx SINE Alu 1 258 -54 2019 69 127 3 chr2 109587321 109587612 -141100242 + LTR66 LTR ERVL 284 610 0 977 122 0 7 chr2 109587612 109587751 -141100103 + AluSg/x SINE Alu 142 279 -33 396 0 0 0 chr2 109587770 109587814 -141100040 + (GAGAA)n Simple_repeat Simple_repeat 4 47 0 6540 120 14 23 chr2 109587814 109588355 -141099499 + L1MA2 LINE L1 4634 5179 -1125 2062 101 0 17 chr2 109588355 109588675 -141099179 + AluSx SINE Alu 1 315 0 6540 120 14 23 chr2 109588675 109589714 -141098140 + L1MA2 LINE L1 5179 6202 -102 2231 94 13 3 chr2 109590714 109591012 -141096842 + AluSq SINE Alu 1 301 -12 917 154 19 0 chr2 109591376 109591532 -141096322 + L1MB3 LINE L1 6016 6174 -9 988 208 77 39 chr2 109592942 109593202 -141094652 + Charlie1a DNA MER1_type 1 270 -1185 1248 180 51 44 chr2 109593207 109593349 -141094505 + L1MD2 LINE L1 5549 5689 -670 1601 173 16 49 chr2 109593349 109593656 -141094198 + AluJb SINE Alu 1 297 -15 1248 180 51 44 chr2 109593656 109593808 -141094046 + L1MD2 LINE L1 5689 5845 -514 1116 137 14 38 chr2 109593804 109594015 -141093839 + L1MB3 LINE L1 5900 6105 -78 * 3324 192 136 64 chr2 109594221 109595327 -141092527 + Charlie1a DNA MER1_type 271 1455 0 210 23 70 23 chr2 109595539 109595582 -141092272 + (CCCGG)n Simple_repeat Simple_repeat 2 46 0 2302 60 30 17 chr2 109596511 109596810 -141091044 + AluSp SINE Alu 1 303 -10 219 36 0 0 chr2 109597038 109597066 -141090788 + (A)n Simple_repeat Simple_repeat 1 28 0 2178 109 0 7 chr2 109597183 109597485 -141090369 + AluSx SINE Alu 1 300 -12 21 57 0 0 chr2 109597588 109597623 -141090231 + AT_rich Low_complexity Low_complexity 1 35 0 280 268 158 12 chr2 109597826 109597908 -141089946 - AluJo SINE Alu -82 220 127 300 296 66 26 chr2 109597908 109598060 -141089794 + L1ME LINE L1 5536 5693 -428 327 138 0 61 chr2 109598063 109598288 -141089566 + AluJo SINE Alu 5 272 -30 1315 103 23 0 chr2 109598388 109598563 -141089291 - AluSp SINE Alu -134 179 1 427 125 62 12 chr2 109599220 109599300 -141088554 + L1MB2 LINE L1 6088 6171 0 180 0 0 0 chr2 109599466 109599486 -141088368 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1011 213 129 7 chr2 109600221 109600508 -141087346 + MER33 DNA MER1_type 1 322 -2 180 265 145 34 chr2 109600626 109600743 -141087111 + MIR SINE MIR 122 251 -11 23 0 0 0 chr2 109600995 109601018 -141086836 + AT_rich Low_complexity Low_complexity 1 23 0 216 282 0 24 chr2 109601715 109601800 -141086054 + A-rich Low_complexity Low_complexity 1 83 0 1135 180 3 0 chr2 109602002 109602218 -141085636 + L1M3 LINE L1 5577 5796 -370 349 257 118 1 chr2 109602297 109602407 -141085447 - MIR SINE MIR -68 140 34 2432 103 0 0 chr2 109603013 109603325 -141084529 + AluSx SINE Alu 1 312 0 1742 182 0 0 chr2 109603348 109603628 -141084226 + AluJo SINE Alu 1 280 -32 309 288 38 0 chr2 109603840 109603920 -141083934 + L2 LINE L2 3188 3270 -2 396 296 114 27 chr2 109604147 109604396 -141083458 - L2 LINE L2 -1 3271 2713 217 316 111 26 chr2 109604392 109604509 -141083345 + L2 LINE L2 2925 3051 -221 * 214 288 17 0 chr2 109604827 109604886 -141082968 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 1924 177 92 62 chr2 109605117 109605649 -141082205 + L1 LINE L1 2658 3205 -2941 1307 163 111 0 chr2 109605643 109605895 -141081959 + L1MA6 LINE L1 6021 6300 0 * 756 176 7 29 chr2 109607606 109607742 -141080112 + FLAM_C SINE Alu 1 133 0 459 0 0 0 chr2 109607766 109607817 -141080037 + (CA)n Simple_repeat Simple_repeat 2 52 0 461 325 187 32 chr2 109608749 109608888 -141078966 + L2 LINE L2 1636 1752 -1562 2518 65 3 0 chr2 109608888 109609196 -141078658 - AluY SINE Alu -2 309 1 461 325 187 32 chr2 109609196 109609742 -141078112 + L2 LINE L2 1752 2427 -887 262 291 154 22 chr2 109609751 109609933 -141077921 + L2 LINE L2 2616 2821 -493 1281 160 9 0 chr2 109609936 109610155 -141077699 - AluSg/x SINE Alu -8 304 84 3183 199 66 22 chr2 109610258 109610581 -141077273 + L1MB3 LINE L1 5150 5457 -726 1838 141 4 0 chr2 109610581 109610850 -141077004 + AluSx SINE Alu 11 280 -32 249 108 0 0 chr2 109610851 109610888 -141076966 + (CATA)n Simple_repeat Simple_repeat 2 38 0 3183 199 66 22 chr2 109610888 109611408 -141076446 + L1MB3 LINE L1 5456 6042 -141 252 59 0 0 chr2 109611512 109611546 -141076308 + (TG)n Simple_repeat Simple_repeat 1 34 0 288 0 0 0 chr2 109611615 109611647 -141076207 + (TG)n Simple_repeat Simple_repeat 2 33 0 923 301 205 43 chr2 109612203 109613323 -141074531 + L2 LINE L2 1008 2309 -1005 522 157 34 0 chr2 109613323 109613412 -141074442 - L1MA4 LINE L1 -88 6212 6121 351 65 0 0 chr2 109614226 109614272 -141073582 - MADE1 DNA Mariner -32 48 3 2219 62 38 10 chr2 109614551 109614841 -141073013 + AluY SINE Alu 1 298 -13 363 152 83 129 chr2 109614910 109614972 -141072882 + MER8 DNA MER2_type 1 55 -184 2115 103 13 3 chr2 109614972 109615272 -141072582 + AluSx SINE Alu 2 304 -8 363 152 83 129 chr2 109615272 109615341 -141072513 + MER8 DNA MER2_type 55 126 -113 306 102 0 0 chr2 109615460 109615509 -141072345 + AluSc SINE Alu 251 299 0 1415 230 107 19 chr2 109615564 109615994 -141071860 + L1ME1 LINE L1 5643 6110 -56 2227 107 7 3 chr2 109615994 109616294 -141071560 + AluSx SINE Alu 1 301 -11 2458 94 0 0 chr2 109616315 109616622 -141071232 + AluSc SINE Alu 1 307 -2 6417 147 33 36 chr2 109616805 109617493 -141070361 + L1 LINE L1 10 694 -6871 1761 176 13 13 chr2 109617493 109617800 -141070054 - AluJb SINE Alu -5 307 1 6417 147 33 36 chr2 109617800 109618240 -141069614 + L1 LINE L1 694 1134 -6431 14282 131 9 63 chr2 109618340 109619279 -141068575 + L1 LINE L1 1112 2099 -5466 1903 157 3 13 chr2 109619279 109619591 -141068263 + AluJb SINE Alu 1 309 -3 14282 131 9 63 chr2 109619591 109620213 -141067641 + L1 LINE L1 2099 2753 -4812 1770 126 16 4 chr2 109620213 109620467 -141067387 - AluSp SINE Alu -56 257 1 14282 131 9 63 chr2 109620467 109621079 -141066775 + L1 LINE L1 2753 3136 -4429 2307 78 10 0 chr2 109621079 109621372 -141066482 + AluSg SINE Alu 1 296 -14 14282 131 9 63 chr2 109621372 109621717 -141066137 + L1 LINE L1 3136 3498 -4067 357 93 0 0 chr2 109621718 109621772 -141066082 + (GGGA)n Simple_repeat Simple_repeat 2 55 0 1608 172 12 15 chr2 109621783 109622230 -141065624 + L1 LINE L1 3463 3909 -3656 363 96 0 0 chr2 109622233 109622285 -141065569 + (GGGGA)n Simple_repeat Simple_repeat 2 53 0 7408 142 11 132 chr2 109622290 109622543 -141065311 + L1 LINE L1 5107 5389 -2176 992 220 5 20 chr2 109622543 109622743 -141065111 + AluJo SINE Alu 1 197 -115 7408 142 11 132 chr2 109622743 109624092 -141063762 + L1 LINE L1 5389 6689 -876 1225 113 0 0 chr2 109624092 109624252 -141063602 + AluSx SINE Alu 1 160 -152 1036 125 0 13 chr2 109624252 109624404 -141063450 - AluSg/x SINE Alu -46 264 115 2197 102 3 7 chr2 109624504 109624797 -141063057 - AluSc SINE Alu -17 292 1 2660 231 147 34 chr2 109624797 109625109 -141062745 - L1MDa LINE L1 -986 5094 4819 1942 131 35 3 chr2 109625109 109625392 -141062462 - AluSx SINE Alu -20 292 1 2660 231 147 34 chr2 109625392 109626091 -141061763 - L1MDa LINE L1 -1261 4819 3968 797 167 0 70 chr2 109626100 109626256 -141061598 - AluJo SINE Alu -162 150 6 901 177 38 88 chr2 109626307 109626490 -141061364 - L1MDa LINE L1 -2133 3947 3756 2403 81 3 0 chr2 109626490 109626788 -141061066 + AluSq SINE Alu 1 299 -14 901 177 38 88 chr2 109626788 109626859 -141060995 - L1MDa LINE L1 -2324 3756 3683 1459 155 16 4 chr2 109626859 109627104 -141060750 - L1MB4 LINE L1 0 6180 5933 1971 168 0 0 chr2 109627106 109627416 -141060438 - AluSx SINE Alu -2 310 1 901 177 38 88 chr2 109627416 109627520 -141060334 - L1MDa LINE L1 -2398 3682 3638 2279 224 60 77 chr2 109627520 109627857 -141059997 - L1MDa LINE L1 -3218 2862 2521 2092 98 22 0 chr2 109627857 109628183 -141059671 - AluY SINE Alu 0 332 1 2279 224 60 77 chr2 109628183 109628464 -141059390 - L1MDa LINE L1 -3559 2521 2237 2058 151 3 0 chr2 109628464 109628768 -141059086 - AluSx SINE Alu -7 305 1 2279 224 60 77 chr2 109628768 109628816 -141059038 - L1MDa LINE L1 -3843 2237 2190 1604 185 3 38 chr2 109628816 109629108 -141058746 + AluJo SINE Alu 1 282 -30 2279 224 60 77 chr2 109629108 109629304 -141058550 - L1MDa LINE L1 -3890 2190 1992 2056 148 0 0 chr2 109629304 109629602 -141058252 - AluSx SINE Alu -14 298 1 2279 224 60 77 chr2 109629602 109629928 -141057926 - L1MDa LINE L1 -4088 1992 1689 2322 107 3 0 chr2 109629936 109630246 -141057608 - AluSp SINE Alu -2 311 1 944 225 20 117 chr2 109630284 109630679 -141057175 + L1 LINE L1 2561 2917 -3229 2338 77 0 55 chr2 109630679 109631006 -141056848 + AluY SINE Alu 3 311 0 726 264 137 48 chr2 109631203 109631642 -141056212 - L1MC4 LINE L1 -149 7893 7416 957 240 41 4 chr2 109631646 109631892 -141055962 - L1ME1 LINE L1 -4 6162 5908 * 1021 246 133 36 chr2 109631887 109632554 -141055300 - L1MDa LINE L1 -4807 1273 542 2118 114 7 0 chr2 109632603 109632892 -141054962 - AluSx SINE Alu -4 308 18 14396 27 0 0 chr2 109632971 109635330 -141052524 - L1PA2 LINE L1 0 6155 3797 349 287 81 45 chr2 109635504 109635727 -141052127 - L1MDa LINE L1 -5573 497 267 839 185 86 12 chr2 109635786 109635948 -141051906 - FAM SINE Alu -1 174 1 188 305 0 51 chr2 109637649 109637708 -141050146 - L2 LINE L2 -4 3268 3213 2465 44 7 7 chr2 109637788 109638082 -141049772 + AluY SINE Alu 1 294 -17 984 221 31 0 chr2 109638846 109639041 -141048813 - MER58A DNA MER1_type 0 224 24 269 301 38 21 chr2 109639405 109639591 -141048263 + L1MCc LINE L1 1304 1492 -4931 4889 138 33 70 chr2 109639723 109639951 -141047903 - L1MA5 LINE L1 -2 6298 6063 2085 120 33 0 chr2 109639951 109640252 -141047602 - AluSx SINE Alu -1 311 1 4889 138 33 70 chr2 109640252 109641026 -141046828 - L1MA5 LINE L1 -237 6063 5333 2123 189 83 13 chr2 109641287 109641768 -141046086 - L1MC2 LINE L1 -8 6336 5817 463 170 12 259 chr2 109642061 109642137 -141045717 + MER5A DNA MER1_type 1 94 -95 1957 74 4 0 chr2 109642137 109642379 -141045475 + AluSp SINE Alu 69 311 -2 2148 119 10 0 chr2 109642389 109642684 -141045170 + AluSx SINE Alu 1 298 -14 2206 105 0 0 chr2 109642684 109642968 -141044886 + AluSq SINE Alu 1 285 -28 463 170 12 259 chr2 109642968 109643126 -141044728 + MER5A DNA MER1_type 103 186 -3 2061 138 0 13 chr2 109643519 109643823 -141044031 - AluSx SINE Alu -12 300 1 2232 102 0 3 chr2 109643885 109644179 -141043675 - AluSq SINE Alu -8 305 13 2345 201 99 13 chr2 109644302 109644583 -141043271 - L1MB3 LINE L1 -3 6180 5900 349 287 111 40 chr2 109644583 109644907 -141042947 - L1PA8A LINE L1 -264 5867 5521 8607 152 33 50 chr2 109645015 109645580 -141042274 - L1MB3 LINE L1 -1058 5088 4515 360 0 0 0 chr2 109645580 109645620 -141042234 + (TG)n Simple_repeat Simple_repeat 1 40 0 8607 152 33 50 chr2 109645620 109645928 -141041926 - L1MB3 LINE L1 -1631 4515 4203 195 69 0 0 chr2 109645928 109645957 -141041897 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1967 135 0 4 chr2 109645957 109646238 -141041616 - AluSx SINE Alu -32 280 1 8607 152 33 50 chr2 109646238 109647231 -141040623 - L1MB3 LINE L1 -1941 4205 3252 206 134 50 17 chr2 109647231 109647339 -141040515 + CT-rich Low_complexity Low_complexity 1 111 0 1590 190 23 16 chr2 109647365 109647675 -141040179 - AluJb SINE Alu 0 312 1 255 192 26 0 chr2 109647675 109647745 -141040109 - L1MB3 LINE L1 -2881 3265 3191 1967 166 15 41 chr2 109647755 109648147 -141039707 - L1PB4 LINE L1 -5 6151 5770 549 160 100 13 chr2 109648165 109648315 -141039539 + L1M4 LINE L1 4386 4548 -1598 227 152 43 0 chr2 109648344 109648390 -141039464 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 2493 74 0 7 chr2 109649103 109649413 -141038441 + AluSc SINE Alu 1 308 -1 2448 198 81 70 chr2 109649747 109650486 -141037368 - L1ME2 LINE L1 -1 6163 5417 1741 115 123 7 chr2 109650730 109651071 -141036783 - AluSx SINE Alu 0 372 1 22 0 0 0 chr2 109651076 109651098 -141036756 + AT_rich Low_complexity Low_complexity 1 22 0 2084 112 16 13 chr2 109651597 109651900 -141035954 - AluSx SINE Alu -7 305 2 2179 131 0 0 chr2 109652304 109652609 -141035245 + AluSx SINE Alu 1 305 -7 1672 122 61 82 chr2 109652610 109652839 -141035015 - MSTC LTR MaLR -106 322 101 1374 237 14 17 chr2 109652839 109653130 -141034724 - AluJo SINE Alu -10 292 3 1672 122 61 82 chr2 109653130 109653229 -141034625 - MSTC LTR MaLR -327 101 1 512 215 265 25 chr2 109653229 109653428 -141034426 + MLT1E2 LTR MaLR 72 318 -308 2284 111 0 0 chr2 109653428 109653726 -141034128 - AluSc SINE Alu -11 298 1 241 79 111 159 chr2 109653727 109653790 -141034064 - L1M LINE L1 -971 5332 5273 2059 132 0 10 chr2 109653910 109654213 -141033641 - AluSx SINE Alu -12 300 1 1267 123 171 0 chr2 109654946 109655174 -141032680 - AluSx SINE Alu -45 267 1 22 0 0 0 chr2 109655179 109655201 -141032653 + AT_rich Low_complexity Low_complexity 1 22 0 2084 112 16 13 chr2 109655700 109656003 -141031851 - AluSx SINE Alu -7 305 2 2150 134 0 0 chr2 109656407 109656712 -141031142 + AluSx SINE Alu 1 305 -7 1672 122 61 82 chr2 109656713 109656942 -141030912 - MSTC LTR MaLR -106 322 101 1374 237 14 17 chr2 109656942 109657233 -141030621 - AluJo SINE Alu -10 292 3 1672 122 61 82 chr2 109657233 109657332 -141030522 - MSTC LTR MaLR -327 101 1 1399 232 162 38 chr2 109657332 109657533 -141030321 + MLT1E2 LTR MaLR 72 247 -379 2368 94 0 0 chr2 109657533 109657831 -141030023 - AluSc SINE Alu -11 298 1 1399 232 162 38 chr2 109657831 109658123 -141029731 + MLT1E2 LTR MaLR 247 626 0 1877 165 0 3 chr2 109658264 109658555 -141029299 + AluJb SINE Alu 1 290 -22 239 303 61 66 chr2 109658958 109659156 -141028698 - MARNA DNA Mariner -99 487 291 365 176 47 0 chr2 109659213 109659298 -141028556 + Cheshire DNA MER1_type 1079 1167 -1253 447 351 29 41 chr2 109659309 109659722 -141028132 + L1M3d LINE L1 241 648 -5483 980 253 89 47 chr2 109659895 109660366 -141027488 + L1M3d LINE L1 932 1422 -4719 804 154 0 29 chr2 109660366 109660502 -141027352 + AluJb SINE Alu 1 132 -180 3895 223 134 34 chr2 109660507 109661315 -141026539 + L1M4 LINE L1 1161 1887 -4495 2212 121 0 0 chr2 109661315 109661605 -141026249 + AluSx SINE Alu 1 290 -22 3895 223 134 34 chr2 109661605 109661902 -141025952 + L1M4 LINE L1 1887 2153 -4229 2043 120 60 0 chr2 109661902 109662185 -141025669 + AluSq SINE Alu 1 300 -13 3895 223 134 34 chr2 109662185 109663654 -141024200 + L1M4 LINE L1 2153 4006 -2376 6879 147 31 33 chr2 109663654 109663938 -141023916 - Tigger3b DNA MER2_type -1797 1231 948 2187 93 21 0 chr2 109663938 109664227 -141023627 + AluSx SINE Alu 1 295 -17 6879 147 31 33 chr2 109664227 109665176 -141022678 - Tigger3b DNA MER2_type -2080 948 1 312 329 61 31 chr2 109665264 109665492 -141022362 + L1MC4 LINE L1 7437 7671 -371 180 0 0 0 chr2 109665514 109665534 -141022320 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 4071 215 58 20 chr2 109665535 109667312 -141020542 - L1MB8 LINE L1 -5 6173 4321 2404 78 0 7 chr2 109667774 109668081 -141019773 + AluY SINE Alu 1 305 -6 355 273 117 36 chr2 109668172 109668421 -141019433 + L1M4 LINE L1 4983 5251 -1131 2715 204 53 32 chr2 109668591 109668936 -141018918 + L1M3 LINE L1 4635 4971 -1209 2129 126 0 3 chr2 109668936 109669230 -141018624 + AluSg SINE Alu 1 293 -17 2715 204 53 32 chr2 109669230 109669706 -141018148 + L1M3 LINE L1 4971 5481 -699 1125 199 16 19 chr2 109669713 109669969 -141017885 + AluSx SINE Alu 11 265 -47 9365 197 64 55 chr2 109670237 109672630 -141015224 - L1P4 LINE L1 -688 5478 3108 2492 94 0 0 chr2 109672630 109672938 -141014916 - AluSx SINE Alu -4 308 1 365 53 0 19 chr2 109672942 109673002 -141014852 - Alu SINE Alu -250 52 1 9365 197 64 55 chr2 109673002 109673337 -141014517 - L1P4 LINE L1 -3060 3106 2665 286 59 0 0 chr2 109673602 109673636 -141014218 - Tigger4(Zombi) DNA MER2_type -2695 36 3 1041 165 28 28 chr2 109673636 109673854 -141014000 + L1MA8 LINE L1 6070 6287 -4 379 336 35 0 chr2 109674575 109674718 -141013136 - L2 LINE L2 -396 2918 2771 25 0 0 0 chr2 109675433 109675458 -141012396 + AT_rich Low_complexity Low_complexity 1 25 0 1589 186 10 23 chr2 109675539 109675674 -141012180 + AluJo SINE Alu 1 136 -176 2068 102 10 3 chr2 109675674 109675967 -141011887 + AluSg SINE Alu 1 295 -15 1589 186 10 23 chr2 109675967 109676132 -141011722 + AluJo SINE Alu 136 297 -15 25 31 0 0 chr2 109676289 109676321 -141011533 + AT_rich Low_complexity Low_complexity 1 32 0 440 246 0 9 chr2 109676380 109676494 -141011360 - L1MC/D LINE L1 -2035 5773 5661 2401 274 68 27 chr2 109676513 109677392 -141010462 - L1M3d LINE L1 -4973 918 4 917 194 25 20 chr2 109677393 109677589 -141010265 - MLT1D LTR MaLR -308 197 1 653 221 40 85 chr2 109677634 109677761 -141010093 + MER20B DNA MER1_type 468 584 -199 2232 107 7 0 chr2 109677761 109678059 -141009795 + AluSg SINE Alu 1 300 -10 653 221 40 85 chr2 109678059 109678130 -141009724 + MER20B DNA MER1_type 584 657 -126 186 197 0 33 chr2 109678533 109678594 -141009260 + GA-rich Low_complexity Low_complexity 5 63 0 256 339 0 0 chr2 109678611 109678723 -141009131 + A-rich Low_complexity Low_complexity 1 112 0 303 255 0 0 chr2 109678760 109678807 -141009047 + A-rich Low_complexity Low_complexity 1 47 0 27 56 0 0 chr2 109678845 109678881 -141008973 + GC_rich Low_complexity Low_complexity 1 36 0 556 316 12 15 chr2 109678919 109679497 -141008357 + GA-rich Low_complexity Low_complexity 1 576 0 183 80 0 0 chr2 109680015 109680040 -141007814 + (G)n Simple_repeat Simple_repeat 1 25 0 213 211 0 0 chr2 109680108 109680165 -141007689 + T-rich Low_complexity Low_complexity 1 57 0 189 0 0 0 chr2 109680238 109680259 -141007595 + (TGGGGG)n Simple_repeat Simple_repeat 4 24 0 380 223 5 43 chr2 109680278 109680462 -141007392 + G-rich Low_complexity Low_complexity 4 180 0 233 107 0 36 chr2 109680512 109680568 -141007286 + (TGGGGG)n Simple_repeat Simple_repeat 2 55 0 308 163 7 98 chr2 109680579 109680775 -141007079 + G-rich Low_complexity Low_complexity 1 178 0 22 56 0 0 chr2 109681625 109681661 -141006193 + GC_rich Low_complexity Low_complexity 1 36 0 213 264 25 33 chr2 109682395 109682516 -141005338 + A-rich Low_complexity Low_complexity 1 120 0 22 0 0 0 chr2 109682584 109682606 -141005248 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 109683570 109683600 -141004254 + AT_rich Low_complexity Low_complexity 1 30 0 35 62 0 31 chr2 109683626 109683722 -141004132 + AT_rich Low_complexity Low_complexity 1 93 0 22 0 0 0 chr2 109683767 109683789 -141004065 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 109684394 109684431 -141003423 + AT_rich Low_complexity Low_complexity 1 37 0 364 400 0 0 chr2 109685211 109685386 -141002468 + G-rich Low_complexity Low_complexity 1 175 0 283 175 45 26 chr2 109685395 109685549 -141002305 + GA-rich Low_complexity Low_complexity 3 159 0 346 259 14 20 chr2 109686751 109686934 -141000920 + C-rich Low_complexity Low_complexity 1 181 0 200 89 44 22 chr2 109687419 109687464 -141000390 + CT-rich Low_complexity Low_complexity 1 46 0 256 353 0 0 chr2 109689216 109689267 -140998587 + T-rich Low_complexity Low_complexity 1 51 0 210 164 0 0 chr2 109689298 109689353 -140998501 + T-rich Low_complexity Low_complexity 1 55 0 37 23 0 0 chr2 109689367 109689411 -140998443 + AT_rich Low_complexity Low_complexity 1 44 0 299 189 0 21 chr2 109689503 109689646 -140998208 + T-rich Low_complexity Low_complexity 1 140 0 29 0 0 0 chr2 109689820 109689849 -140998005 + AT_rich Low_complexity Low_complexity 1 29 0 212 241 26 17 chr2 109689948 109690064 -140997790 + T-rich Low_complexity Low_complexity 5 121 0 41 21 0 0 chr2 109690162 109690210 -140997644 + AT_rich Low_complexity Low_complexity 1 48 0 327 96 0 0 chr2 109692107 109692159 -140995695 + (A)n Simple_repeat Simple_repeat 1 52 0 246 192 0 0 chr2 109692317 109692369 -140995485 + GA-rich Low_complexity Low_complexity 4 55 0 395 249 12 52 chr2 109692388 109692561 -140995293 + A-rich Low_complexity Low_complexity 4 169 0 337 336 14 0 chr2 109692580 109692720 -140995134 + GA-rich Low_complexity Low_complexity 3 144 0 257 384 0 0 chr2 109692786 109692945 -140994909 + A-rich Low_complexity Low_complexity 1 159 0 * 337 275 0 72 chr2 109692838 109693031 -140994823 + GA-rich Low_complexity Low_complexity 2 180 0 215 405 0 24 chr2 109693268 109693436 -140994418 + G-rich Low_complexity Low_complexity 6 169 0 421 317 13 9 chr2 109693652 109693852 -140994002 + A-rich Low_complexity Low_complexity 1 200 0 306 320 10 26 chr2 109693989 109694176 -140993678 + GA-rich Low_complexity Low_complexity 1 183 0 189 0 0 0 chr2 109697088 109697109 -140990745 + (CCCCG)n Simple_repeat Simple_repeat 4 24 0 24 0 0 0 chr2 109697271 109697295 -140990559 + AT_rich Low_complexity Low_complexity 1 24 0 354 225 22 28 chr2 109699401 109699579 -140988275 + A-rich Low_complexity Low_complexity 1 177 0 290 205 8 60 chr2 109700066 109700183 -140987671 + A-rich Low_complexity Low_complexity 6 116 0 183 98 0 59 chr2 109700281 109700332 -140987522 + (CAAAAA)n Simple_repeat Simple_repeat 6 53 0 209 244 43 49 chr2 109700516 109700680 -140987174 + (CACAA)n Simple_repeat Simple_repeat 5 167 0 21 0 0 0 chr2 109700985 109701006 -140986848 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 109701142 109701163 -140986691 + AT_rich Low_complexity Low_complexity 1 21 0 296 273 8 39 chr2 109701286 109701414 -140986440 + GA-rich Low_complexity Low_complexity 3 126 0 284 226 43 11 chr2 109702181 109702274 -140985580 + MER20B DNA MER1_type 683 778 -5 255 340 10 29 chr2 109702313 109702416 -140985438 - MIR SINE MIR -66 142 42 183 299 75 0 chr2 109702695 109702762 -140985092 + L2 LINE L2 2951 3022 -250 234 294 82 55 chr2 109704008 109704154 -140983700 + MLT1J LTR MaLR 343 492 -19 419 290 37 53 chr2 109704279 109704524 -140983330 + L1M3e LINE L1 -722 4294966814 -6788 1956 243 47 34 chr2 109704985 109705791 -140982063 + L1M3e LINE L1 927 1797 -4516 1847 150 97 21 chr2 109705792 109706173 -140981681 + L1MB3 LINE L1 5774 6183 0 485 246 54 42 chr2 109706213 109706380 -140981474 - HAL1b LINE L1 -82 1266 1098 1823 139 3 65 chr2 109706432 109706742 -140981112 + AluSx SINE Alu 1 291 -21 305 77 19 0 chr2 109706801 109706853 -140981001 - L1MB4 LINE L1 -1 6179 6127 701 260 79 75 chr2 109706886 109707394 -140980460 - HAL1b LINE L1 -447 901 392 472 146 18 0 chr2 109707428 109707524 -140980330 - MLT-int LTR MaLR 0 1720 1554 918 218 58 2 chr2 109707677 109707990 -140979864 - MSTD LTR MaLR -3 393 1 446 211 89 8 chr2 109707990 109708113 -140979741 - MSTD-int LTR MaLR 0 1735 1603 1595 101 60 0 chr2 109708829 109709046 -140978808 + MER30 DNA MER1_type 1 230 0 217 340 75 19 chr2 109709103 109709209 -140978645 - MIR SINE MIR -65 143 32 203 237 0 26 chr2 109710371 109710434 -140977420 + GA-rich Low_complexity Low_complexity 3 65 -11 642 13 0 0 chr2 109710434 109710511 -140977343 + L1PA2 LINE L1 6079 6155 0 203 237 0 26 chr2 109710511 109710523 -140977331 + GA-rich Low_complexity Low_complexity 65 76 0 1903 166 3 3 chr2 109710754 109711049 -140976805 + AluJb SINE Alu 1 295 -17 2150 119 10 0 chr2 109712364 109712674 -140975180 + AluSq SINE Alu 1 313 0 445 314 143 35 chr2 109712845 109713298 -140974556 + HAL1b LINE L1 153 654 -694 802 216 0 0 chr2 109714324 109714449 -140973405 - FLAM_C SINE Alu -17 126 2 294 248 80 40 chr2 109714789 109714914 -140972940 - MIR SINE MIR -35 227 98 247 192 170 16 chr2 109715237 109715419 -140972435 + L1M4 LINE L1 3096 3305 -2841 572 180 0 9 chr2 109715469 109715580 -140972274 + L1M4 LINE L1 4513 4622 -1524 323 194 75 0 chr2 109715590 109715657 -140972197 - Tigger1 DNA MER2_type -811 1607 1536 * 2772 113 27 36 chr2 109715646 109716089 -140971765 + Tigger1 DNA MER2_type 1017 1455 -963 1162 118 6 0 chr2 109716110 109716280 -140971574 + Tigger1 DNA MER2_type 1584 1754 -664 * 6224 111 56 22 chr2 109716275 109717040 -140970814 - Tigger1 DNA MER2_type -1400 1018 211 1985 134 0 32 chr2 109717040 109717353 -140970501 + AluJo SINE Alu 1 303 -9 6224 111 56 22 chr2 109717353 109717572 -140970282 - Tigger1 DNA MER2_type -2207 211 1 309 279 106 0 chr2 109718960 109719064 -140968790 + LTR33 LTR ERVL 403 517 -4 1544 184 54 0 chr2 109719104 109719381 -140968473 - AluJo SINE Alu -20 292 1 209 263 0 18 chr2 109719386 109719443 -140968411 + MIR SINE MIR 85 140 -68 14189 189 40 26 chr2 109720725 109721595 -140966259 - L1MA4A LINE L1 -23 6979 6123 2221 92 7 0 chr2 109721595 109721890 -140965964 - AluY SINE Alu -14 297 1 14189 189 40 26 chr2 109721890 109725406 -140962448 - L1MA4A LINE L1 -879 6123 2396 1558 186 13 28 chr2 109725406 109725723 -140962131 - AluJb SINE Alu 0 312 1 14189 189 40 26 chr2 109725723 109728142 -140959712 - L1MA4A LINE L1 -4606 2396 13 2411 221 60 19 chr2 109728142 109728730 -140959124 + MER65A-int LTR ERV1 4260 4871 0 2607 136 15 42 chr2 109728730 109729187 -140958667 + MER65A LTR ERV1 1 445 0 400 212 0 117 chr2 109729251 109729388 -140958466 + MLT1H LTR MaLR 429 549 0 22 35 0 0 chr2 109729671 109729700 -140958154 + AT_rich Low_complexity Low_complexity 1 29 0 211 217 225 8 chr2 109730854 109730983 -140956871 - MIR3 SINE MIR -40 168 12 214 260 82 14 chr2 109731684 109731757 -140956097 + L2 LINE L2 3174 3251 -62 44 35 0 0 chr2 109732470 109732528 -140955326 + AT_rich Low_complexity Low_complexity 1 58 0 211 217 22 0 chr2 109732898 109732944 -140954910 + MER5B DNA MER1_type 4 50 -128 8868 201 85 44 chr2 109732944 109734883 -140952971 + L1MD1 LINE L1 9 1868 -4768 2135 118 0 0 chr2 109734883 109735170 -140952684 + AluSx SINE Alu 1 287 -25 8868 201 85 44 chr2 109735170 109735453 -140952401 + L1MD1 LINE L1 1868 2138 -4498 2119 121 23 3 chr2 109735453 109735760 -140952094 + AluSq SINE Alu 1 313 0 8868 201 85 44 chr2 109735760 109737001 -140950853 + L1MD1 LINE L1 2138 3327 -3309 1965 128 3 21 chr2 109737001 109737137 -140950717 + AluSx SINE Alu 1 138 -169 1883 101 112 0 chr2 109737137 109737405 -140950449 + AluSg SINE Alu 1 298 -12 1965 128 3 21 chr2 109737405 109737580 -140950274 + AluSx SINE Alu 138 307 0 8868 201 85 44 chr2 109737580 109740227 -140947627 + L1MD1 LINE L1 3327 6635 -1 185 288 25 76 chr2 109740256 109740374 -140947480 + MER5B DNA MER1_type 59 170 -8 2057 129 3 13 chr2 109742543 109742845 -140945009 + AluSx SINE Alu 1 299 -13 184 317 0 0 chr2 109743497 109743538 -140944316 + L2 LINE L2 3224 3264 -8 383 261 52 15 chr2 109745055 109745189 -140942665 + MIR SINE MIR 46 184 -78 207 214 0 0 chr2 109746179 109746221 -140941633 + (ATG)n Simple_repeat Simple_repeat 1 42 0 2372 87 0 7 chr2 109748137 109748447 -140939407 - AluY SINE Alu -3 308 1 343 128 0 11 chr2 109748704 109748773 -140939081 + AluY SINE Alu 1 44 -256 2132 72 0 4 chr2 109748904 109749166 -140938688 + AluY SINE Alu 39 299 -12 2332 119 3 0 chr2 109749177 109749489 -140938365 + AluSq SINE Alu 1 313 0 1611 143 57 39 chr2 109750113 109750393 -140937461 - AluSx SINE Alu -14 298 14 2339 94 10 0 chr2 109750822 109751130 -140936724 + AluSq SINE Alu 3 313 0 1499 172 114 3 chr2 109752427 109752759 -140935095 + L1MA5 LINE L1 5926 6294 -6 265 213 33 0 chr2 109754189 109754250 -140933604 + MER5A DNA MER1_type 44 106 -83 2182 106 3 0 chr2 109754558 109754860 -140932994 - AluSp SINE Alu 0 303 1 202 281 125 0 chr2 109755406 109755502 -140932352 - MIR SINE MIR -33 229 122 196 309 74 0 chr2 109756100 109756181 -140931673 - MIR SINE MIR -72 136 50 367 196 130 0 chr2 109756196 109756288 -140931566 + MER5A DNA MER1_type 53 156 -33 443 246 88 41 chr2 109758212 109758383 -140929471 - MIR SINE MIR -51 211 33 245 280 121 61 chr2 109760333 109760465 -140927389 + L2 LINE L2 3133 3272 0 1976 150 14 0 chr2 109760825 109761119 -140926735 - AluSx SINE Alu -14 298 1 194 326 61 10 chr2 109761199 109761297 -140926557 - L3b LINE CR1 -132 1451 1349 228 267 17 17 chr2 109762573 109762633 -140925221 - L3 LINE CR1 -96 1481 1422 206 368 0 0 chr2 109763619 109763733 -140924121 + (CCA)n Simple_repeat Simple_repeat 3 116 0 385 279 0 29 chr2 109766008 109766112 -140921742 - MIR SINE MIR -49 213 113 430 235 18 21 chr2 109766737 109766883 -140920971 - MIR3 SINE MIR -52 156 11 2642 58 0 3 chr2 109767450 109767760 -140920094 + AluY SINE Alu 1 309 -2 264 159 0 0 chr2 109767975 109768019 -140919835 - MSTD LTR MaLR -352 44 1 1673 178 92 22 chr2 109769711 109770081 -140917773 - MSTD LTR MaLR 0 396 1 311 222 14 0 chr2 109770275 109770347 -140917507 + MER58B DNA MER1_type 269 341 0 710 169 169 6 chr2 109770520 109770680 -140917174 + MER5A DNA MER1_type 4 189 0 356 246 127 28 chr2 109770911 109771053 -140916801 - L2 LINE L2 0 3272 3117 390 198 115 31 chr2 109772086 109772182 -140915672 + MER45A DNA AcHobo 75 178 0 388 249 12 0 chr2 109772620 109772785 -140915069 + (TG)n Simple_repeat Simple_repeat 2 168 0 659 204 0 6 chr2 109772804 109772985 -140914869 + (TG)n Simple_repeat Simple_repeat 1 180 0 2130 99 15 0 chr2 109774009 109774281 -140913573 - AluSg SINE Alu -34 276 1 1696 113 0 36 chr2 109774381 109774629 -140913225 - AluSx SINE Alu -12 300 62 536 258 141 24 chr2 109776080 109776440 -140911414 - L1ME2 LINE L1 -5 6161 5751 314 265 45 18 chr2 109777375 109777525 -140910329 - MIR SINE MIR -60 148 35 2301 102 0 0 chr2 109779324 109779617 -140908237 - AluSx SINE Alu -19 293 1 268 338 99 7 chr2 109779903 109780045 -140907809 - MIR SINE MIR -92 170 16 1470 145 1 0 chr2 109780860 109781104 -140906750 + L1MB3 LINE L1 5741 5986 -197 1673 164 72 36 chr2 109781711 109782071 -140905783 - THE1C LTR MaLR 0 375 3 10122 115 37 38 chr2 109782071 109783648 -140904206 - THE1C-int LTR MaLR 0 1580 4 1837 153 49 38 chr2 109783651 109784018 -140903836 - THE1C LTR MaLR 0 375 5 783 183 0 7 chr2 109784040 109784177 -140903677 + AluJo SINE Alu 2 137 -175 1711 168 0 17 chr2 109784194 109784485 -140903369 - AluJb SINE Alu -26 286 1 202 151 38 113 chr2 109785056 109785109 -140902745 + L3b LINE CR1 1527 1575 -8 461 84 14 0 chr2 109785388 109785459 -140902395 + (TCCC)n Simple_repeat Simple_repeat 2 73 0 602 235 75 32 chr2 109785460 109785647 -140902207 - AluJo SINE Alu -4 308 114 476 270 99 38 chr2 109786029 109786240 -140901614 - LTR16A LTR ERVL -194 256 33 403 244 43 26 chr2 109786839 109786954 -140900900 + MIR3 SINE MIR 85 201 -7 744 253 98 49 chr2 109787625 109788068 -140899786 - L1MEc LINE L1 -5076 1142 702 1149 101 0 0 chr2 109788198 109788357 -140899497 - L1MA2 LINE L1 -1 6303 6145 280 327 124 29 chr2 109788510 109788816 -140899038 - L1MEc LINE L1 -5977 419 85 2260 98 0 26 chr2 109789882 109790187 -140897667 - AluSx SINE Alu -15 297 1 1971 78 4 0 chr2 109790197 109790439 -140897415 - AluSp SINE Alu -2 311 69 414 200 0 0 chr2 109790440 109790515 -140897339 - MER5A DNA MER1_type -114 75 1 1986 194 81 11 chr2 109790830 109791289 -140896565 + L1MC2 LINE L1 5846 6336 -8 4745 182 74 19 chr2 109791423 109791587 -140896267 - Cheshire DNA MER1_type 0 2420 2266 2506 47 0 60 chr2 109791587 109791906 -140895948 - AluY SINE Alu -11 300 1 4745 182 74 19 chr2 109791906 109792075 -140895779 - Cheshire DNA MER1_type -154 2266 2108 2232 103 10 17 chr2 109792075 109792375 -140895479 - AluSx SINE Alu -14 298 1 4745 182 74 19 chr2 109792375 109792443 -140895411 - Cheshire DNA MER1_type -312 2108 2045 1366 184 15 4 chr2 109792443 109792710 -140895144 - L1MB4 LINE L1 -2 6178 5909 4745 182 74 19 chr2 109792710 109793494 -140894360 - Cheshire DNA MER1_type -375 2045 1168 526 179 93 0 chr2 109793496 109793636 -140894218 - L1MB2 LINE L1 0 6171 6019 1256 226 94 28 chr2 109793639 109794002 -140893852 - MSTD LTR MaLR -8 388 2 2392 164 27 7 chr2 109794003 109794453 -140893401 - L1MB2 LINE L1 -147 6024 5566 3252 215 45 10 chr2 109794459 109795279 -140892575 - L1MB2 LINE L1 -1530 4616 3768 1377 149 56 126 chr2 109795280 109795622 -140892232 + Tigger3(Golem) DNA MER2_type 3 320 -2709 1071 243 76 43 chr2 109795804 109796199 -140891655 - MER74B LTR ERVL -149 473 66 233 261 65 51 chr2 109796261 109796399 -140891455 - L1MB4 LINE L1 -393 5769 5630 314 285 164 18 chr2 109796598 109796763 -140891091 - L1ME4a LINE L1 -139 6376 6188 3381 246 72 24 chr2 109797291 109798655 -140889199 - L1ME4a LINE L1 -1538 5002 3573 1805 139 78 17 chr2 109798657 109798850 -140889004 - AluSq SINE Alu -1 312 93 308 43 22 0 chr2 109798850 109798896 -140888958 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1805 139 78 17 chr2 109798896 109798996 -140888858 - AluSq SINE Alu -220 93 1 1297 188 85 48 chr2 109799083 109799803 -140888051 - L1MDa LINE L1 -3457 3083 2333 1679 150 7 43 chr2 109799878 109800199 -140887655 - AluJo SINE Alu 0 312 1 1993 228 57 28 chr2 109800199 109800704 -140887150 + MER54A LTR ERVL 174 901 0 4208 167 148 48 chr2 109800704 109801020 -140886834 - L1MDa LINE L1 -4203 2337 2054 2178 124 0 0 chr2 109801020 109801318 -140886536 - AluSx SINE Alu -14 298 1 4208 167 148 48 chr2 109801318 109801705 -140886149 - L1MDa LINE L1 -4486 2054 1707 315 0 0 0 chr2 109801705 109801740 -140886114 + (TG)n Simple_repeat Simple_repeat 2 36 0 1561 161 108 0 chr2 109801740 109802019 -140885835 - AluJo SINE Alu -1 311 3 4208 167 148 48 chr2 109802019 109802492 -140885362 - L1MDa LINE L1 -4832 1708 1041 2290 101 3 0 chr2 109802609 109802905 -140884949 - AluSg SINE Alu -13 297 1 2511 70 0 0 chr2 109803431 109803730 -140884124 - AluY SINE Alu -12 299 1 21 57 0 0 chr2 109804217 109804252 -140883602 + AT_rich Low_complexity Low_complexity 1 35 0 1924 138 14 14 chr2 109804258 109804549 -140883305 + AluJo SINE Alu 1 291 -21 981 180 50 10 chr2 109805110 109805310 -140882544 + MER58A DNA MER1_type 6 213 -11 1160 252 77 20 chr2 109806778 109807219 -140880635 + L1MEc LINE L1 892 1357 -5039 221 0 35 0 chr2 109808302 109808331 -140879523 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2223 89 0 4 chr2 109808333 109808614 -140879240 - AluSg SINE Alu -30 280 1 2930 144 72 50 chr2 109808641 109809155 -140878699 - MER21A LTR ERV1 0 931 403 2293 103 3 3 chr2 109809155 109809465 -140878389 - AluSq SINE Alu -3 310 1 2930 144 72 50 chr2 109809465 109809492 -140878362 - MER21A LTR ERV1 -528 403 378 1008 132 236 9 chr2 109809503 109809715 -140878139 - MER21A LTR ERV1 -671 260 1 546 234 62 0 chr2 109809918 109810063 -140877791 - MIR SINE MIR -6 256 103 4588 89 20 3 chr2 109810130 109810771 -140877083 + L1PA13 LINE L1 5508 6159 -4 271 258 83 30 chr2 109811028 109811160 -140876694 - MIR SINE MIR -6 256 118 1626 199 14 7 chr2 109811386 109811683 -140876171 - AluJo SINE Alu -13 299 1 539 56 90 14 chr2 109811702 109811991 -140875863 + (TA)n Simple_repeat Simple_repeat 1 311 0 264 297 88 0 chr2 109812158 109812249 -140875605 + MIR SINE MIR 2 100 -162 578 218 14 21 chr2 109812434 109812576 -140875278 - MLT1H LTR MaLR -3 546 406 541 243 50 16 chr2 109812633 109812794 -140875060 - MLT1H LTR MaLR -347 202 1 2276 90 27 0 chr2 109814929 109815228 -140872626 - AluSc SINE Alu 0 309 3 2304 114 0 0 chr2 109815923 109816231 -140871623 + AluSx SINE Alu 1 308 -4 8767 189 70 33 chr2 109816558 109819333 -140868521 - L1PA16 LINE L1 0 6166 2996 2093 134 3 10 chr2 109819334 109819640 -140868214 - AluSx SINE Alu -4 308 5 2366 94 3 0 chr2 109819651 109819950 -140867904 - AluSp SINE Alu -13 300 1 280 194 14 14 chr2 109819952 109820024 -140867830 + L1M2 LINE L1 2796 2867 -3982 2094 41 0 4 chr2 109820082 109820328 -140867526 - AluY SINE Alu -65 246 2 2475 172 25 45 chr2 109820329 109820732 -140867122 + L1MB2 LINE L1 5661 6070 -101 1482 202 13 7 chr2 109820732 109821034 -140866820 + AluJo SINE Alu 9 312 0 2475 172 25 45 chr2 109821034 109821109 -140866745 + L1MB2 LINE L1 6070 6131 -40 2236 101 7 0 chr2 109821109 109821405 -140866449 + AluSp SINE Alu 1 298 -15 2475 172 25 45 chr2 109821405 109821442 -140866412 + L1MB2 LINE L1 6131 6167 -4 230 167 0 0 chr2 109821461 109821509 -140866345 + L1M2 LINE L1 3872 3919 -2929 1263 57 6 23 chr2 109821511 109821687 -140866167 - AluY SINE Alu -19 292 120 400 236 100 27 chr2 109822541 109822651 -140865203 + MER45A DNA AcHobo 61 178 0 388 249 12 0 chr2 109823089 109823254 -140864600 + (TG)n Simple_repeat Simple_repeat 2 168 0 683 200 0 6 chr2 109823273 109823453 -140864401 + (TG)n Simple_repeat Simple_repeat 2 180 0 2122 99 15 0 chr2 109824476 109824748 -140863106 - AluSg SINE Alu -34 276 1 1670 113 0 36 chr2 109824848 109825096 -140862758 - AluSx SINE Alu -12 300 62 569 266 157 31 chr2 109826550 109826907 -140860947 - L1ME2 LINE L1 -9 6155 5754 250 265 45 18 chr2 109827842 109827992 -140859862 - MIR SINE MIR -60 148 35 2296 99 0 0 chr2 109829790 109830083 -140857771 - AluSx SINE Alu -19 293 1 1531 145 1 0 chr2 109831326 109831570 -140856284 + L1MB3 LINE L1 5741 5986 -197 1686 162 72 36 chr2 109832177 109832536 -140855318 - THE1C LTR MaLR 0 375 4 9978 114 37 39 chr2 109832536 109834115 -140853739 - THE1C-int LTR MaLR 0 1580 4 1708 172 55 28 chr2 109834118 109834479 -140853375 - THE1C LTR MaLR 0 375 5 762 183 0 7 chr2 109834501 109834638 -140853216 + AluJo SINE Alu 2 137 -175 1688 168 0 17 chr2 109834655 109834946 -140852908 - AluJb SINE Alu -26 286 1 180 151 38 113 chr2 109835517 109835570 -140852284 + L3b LINE CR1 1527 1575 -8 357 125 14 14 chr2 109835851 109835923 -140851931 + CT-rich Low_complexity Low_complexity 2 73 0 590 244 85 0 chr2 109835924 109836088 -140851766 - FRAM SINE Alu -4 172 1 523 223 104 43 chr2 109836493 109836704 -140851150 - LTR16A LTR ERVL -194 256 33 343 245 51 10 chr2 109837303 109837401 -140850453 + MIR3 SINE MIR 85 186 -22 790 250 100 50 chr2 109838112 109838532 -140849322 - L1MEc LINE L1 -5254 1142 702 1165 101 0 0 chr2 109838662 109838821 -140849033 - L1MA2 LINE L1 -1 6303 6145 341 320 124 29 chr2 109838974 109839280 -140848574 - L1MEc LINE L1 -5977 419 85 2269 95 0 26 chr2 109840347 109840652 -140847202 - AluSx SINE Alu -15 297 1 616 260 22 40 chr2 109840744 109840967 -140846887 + MIR SINE MIR 2 220 -42 1564 118 165 0 chr2 109841134 109841388 -140846466 + AluSx SINE Alu 1 296 -6 2340 88 0 10 chr2 109841417 109841723 -140846131 + AluY SINE Alu 5 307 -4 491 275 12 6 chr2 109841768 109841935 -140845919 - L1ME4a LINE L1 -267 5854 5687 2344 92 0 7 chr2 109842453 109842759 -140845095 - AluSp SINE Alu -9 304 1 261 219 41 14 chr2 109845404 109845477 -140842377 - MER52-int LTR ERV1 -5442 1649 1575 883 246 188 19 chr2 109846306 109846737 -140841117 - L1ME4a LINE L1 -3 6118 5615 302 329 7 21 chr2 109847921 109848064 -140839790 - MIR SINE MIR -51 211 71 2558 52 0 7 chr2 109848083 109848388 -140839466 + AluY SINE Alu 1 303 -8 646 221 39 50 chr2 109849119 109849300 -140838554 - L1MD1 LINE L1 -5 6237 6059 553 235 74 0 chr2 109849686 109849835 -140838019 + MER3 DNA MER1_type 50 209 0 230 272 56 64 chr2 109849919 109850044 -140837810 - MIR SINE MIR -68 140 17 183 42 0 0 chr2 109850794 109850818 -140837036 + (TG)n Simple_repeat Simple_repeat 1 24 0 2299 65 54 14 chr2 109850886 109851180 -140836674 + AluY SINE Alu 1 306 -5 2107 145 0 0 chr2 109852629 109852926 -140834928 - AluSx SINE Alu -15 297 1 231 348 56 0 chr2 109853776 109853865 -140833989 - MIR SINE MIR -48 214 121 497 198 31 0 chr2 109853869 109853965 -140833889 + MER5A DNA MER1_type 7 105 -84 643 282 7 18 chr2 109854511 109854814 -140833040 + LTR37B LTR ERV1 114 457 -11 262 254 0 14 chr2 109855845 109855916 -140831938 + MER5A DNA MER1_type 40 109 -80 192 238 71 0 chr2 109855902 109855944 -140831910 - MER5A DNA MER1_type -104 85 41 * 414 269 193 0 chr2 109856977 109857122 -140830732 + MER5A DNA MER1_type 10 182 -7 215 250 0 0 chr2 109857140 109857188 -140830666 - MER5B DNA MER1_type -4 174 127 * 235 200 107 53 chr2 109857164 109857239 -140830615 + MER5B DNA MER1_type 92 170 -8 504 266 92 23 chr2 109857281 109857424 -140830430 - MIR3 SINE MIR -15 193 35 1534 203 174 16 chr2 109857424 109857913 -140829941 + MLT1F1 LTR MaLR 1 566 -1 504 266 92 23 chr2 109857913 109857942 -140829912 - MIR3 SINE MIR -173 35 9 2095 129 0 19 chr2 109858661 109858979 -140828875 - AluSq SINE Alu -1 312 1 2586 65 0 3 chr2 109859739 109860049 -140827805 + AluY SINE Alu 1 309 -2 323 320 96 34 chr2 109860056 109860140 -140827714 - MIR SINE MIR -16 246 169 2309 100 0 0 chr2 109860140 109860431 -140827423 + AluSg SINE Alu 1 291 -19 323 320 96 34 chr2 109860431 109860524 -140827330 - MIR SINE MIR -93 169 58 249 257 147 9 chr2 109860998 109861107 -140826747 - LTR33 LTR ERVL -364 157 34 4709 192 36 22 chr2 109861616 109862659 -140825195 - L1MC3 LINE L1 -16 7769 6712 2526 44 0 7 chr2 109862964 109863260 -140824594 - AluY SINE Alu -17 294 1 24 67 0 0 chr2 109864287 109864332 -140823522 + AT_rich Low_complexity Low_complexity 1 45 0 402 57 0 0 chr2 109865113 109865166 -140822688 + (TC)n Simple_repeat Simple_repeat 2 54 0 249 33 0 0 chr2 109865166 109865196 -140822658 + (CA)n Simple_repeat Simple_repeat 1 30 0 249 57 0 0 chr2 109865784 109865819 -140822035 + (GGGTG)n Simple_repeat Simple_repeat 3 37 0 256 180 30 20 chr2 109866157 109866257 -140821597 + (TA)n Simple_repeat Simple_repeat 1 101 0 505 273 52 13 chr2 109866304 109866458 -140821396 - L2 LINE L2 -227 3086 2927 189 307 116 71 chr2 109866743 109866968 -140820886 - MIR SINE MIR -19 243 9 211 302 0 0 chr2 109867480 109867533 -140820321 + MIR SINE MIR 88 140 -68 400 259 95 35 chr2 109867628 109867744 -140820110 - L2 LINE L2 -16 3256 3134 181 278 41 41 chr2 109869004 109869101 -140818753 - MIR3 SINE MIR -31 177 81 568 297 158 39 chr2 109870258 109870568 -140817286 + L2 LINE L2 2967 3313 0 180 0 0 0 chr2 109871558 109871578 -140816276 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 374 233 0 0 chr2 109872285 109872358 -140815496 + MIR SINE MIR 74 146 -116 1711 106 84 51 chr2 109875712 109875845 -140812009 + AluSx SINE Alu 3 130 -178 2953 10 0 0 chr2 109875845 109876157 -140811697 + AluYb8 SINE Alu 1 312 -6 1711 106 84 51 chr2 109876157 109876320 -140811534 + AluSx SINE Alu 130 308 0 2051 128 24 0 chr2 109877500 109877789 -140810065 - AluSx SINE Alu -7 305 10 440 315 23 0 chr2 109877907 109878037 -140809817 - L2 LINE L2 -1 3312 3180 1568 141 150 34 chr2 109879495 109879822 -140808032 - MLT1A1 LTR MaLR 0 365 1 225 0 0 0 chr2 109880494 109880519 -140807335 + (TA)n Simple_repeat Simple_repeat 2 26 0 2633 47 0 3 chr2 109880520 109880820 -140807034 - AluY SINE Alu -12 299 1 786 227 0 0 chr2 109880859 109881000 -140806854 - FRAM SINE Alu -20 156 16 314 297 38 54 chr2 109881325 109881510 -140806344 + MLT1J LTR MaLR 99 280 -231 594 256 86 27 chr2 109882405 109882767 -140805087 - MLT1J2 LTR MaLR -25 425 6 2556 81 0 0 chr2 109882850 109883160 -140804694 + AluY SINE Alu 1 310 -1 2284 104 0 3 chr2 109883306 109883615 -140804239 + AluSg SINE Alu 1 308 -2 365 301 42 35 chr2 109883781 109883924 -140803930 + L2 LINE L2 1859 2002 -1312 244 233 172 52 chr2 109884452 109884568 -140803286 - Charlie8 DNA MER1_type -2286 131 2 554 275 0 14 chr2 109884863 109885005 -140802849 + MIR SINE MIR 97 236 -26 2077 134 3 31 chr2 109885940 109886261 -140801593 + AluJo SINE Alu 1 312 0 683 258 93 5 chr2 109886396 109886590 -140801264 - MIR SINE MIR 0 262 52 2286 67 11 3 chr2 109887407 109887725 -140800129 - AluY SINE Alu 0 320 1 208 283 128 94 chr2 109888050 109888347 -140799507 + L2 LINE L2 2573 2879 -435 3400 151 27 59 chr2 109888569 109888921 -140798933 - MER4D LTR ERV1 -179 724 407 2498 82 0 3 chr2 109888921 109889227 -140798627 - AluY SINE Alu -1 310 6 3400 151 27 59 chr2 109889227 109889621 -140798233 - MER4D LTR ERV1 -496 407 2 2448 54 3 7 chr2 109889629 109889926 -140797928 - AluY SINE Alu -15 296 1 415 311 33 0 chr2 109889983 109890105 -140797749 - MIR SINE MIR -16 246 121 3478 156 3 10 chr2 109890113 109890691 -140797163 + MER50 LTR ERV1 1 574 -160 2368 105 0 7 chr2 109890692 109890998 -140796856 - AluSg SINE Alu -6 304 1 2060 94 59 14 chr2 109890998 109891284 -140796570 - AluSx SINE Alu -13 299 1 2139 87 13 61 chr2 109891799 109891976 -140795878 - AluSc SINE Alu -12 297 140 2365 73 0 0 chr2 109891976 109892264 -140795590 - AluY SINE Alu -23 288 1 2139 87 13 61 chr2 109892264 109892396 -140795458 - AluSc SINE Alu -169 140 3 331 325 25 0 chr2 109892495 109892615 -140795239 - MLT2F LTR ERVL -2 661 539 427 198 48 48 chr2 109892645 109892771 -140795083 - MLT2E LTR ERVL -499 129 3 473 98 0 0 chr2 109892963 109893024 -140794830 - Alu SINE Alu -256 62 2 1846 176 3 10 chr2 109893534 109893841 -140794013 + AluJo SINE Alu 1 305 -7 1145 191 85 4 chr2 109893852 109894098 -140793756 - LOR1b LTR ERV1 -195 266 1 22 35 0 0 chr2 109894189 109894218 -140793636 + AT_rich Low_complexity Low_complexity 1 29 0 311 299 121 25 chr2 109894253 109894410 -140793444 + HAL1 LINE L1 1187 1358 -1149 423 0 0 0 chr2 109894521 109894568 -140793286 + (CA)n Simple_repeat Simple_repeat 1 47 0 27 29 0 0 chr2 109894973 109895007 -140792847 + AT_rich Low_complexity Low_complexity 1 34 0 380 111 28 14 chr2 109895173 109895245 -140792609 - MER96B DNA MER1_type? -236 181 109 1171 157 5 26 chr2 109895247 109895438 -140792416 + AluJo SINE Alu 96 282 -30 227 0 0 83 chr2 109895443 109895479 -140792375 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 1068 90 0 7 chr2 109895664 109895808 -140792046 + LTR8 LTR ERV1 547 689 -2 15557 131 37 46 chr2 109895811 109898756 -140789098 + HUERS-P1 LTR ERV1 1 2739 -3207 2040 153 0 0 chr2 109898756 109899069 -140788785 + AluSq SINE Alu 1 313 0 15557 131 37 46 chr2 109899069 109900996 -140786858 + HUERS-P1 LTR ERV1 2739 4682 -1264 1646 115 0 82 chr2 109901016 109901231 -140786623 + LTR8 LTR ERV1 332 521 -170 2208 75 0 0 chr2 109901231 109901573 -140786281 + AluSc SINE Alu 1 342 0 1646 115 0 82 chr2 109901573 109901635 -140786219 + LTR8 LTR ERV1 521 587 -104 306 279 144 0 chr2 109901665 109901776 -140786078 - L1M4 LINE L1 -1053 5093 4967 2241 85 0 3 chr2 109903725 109904020 -140783834 + AluY SINE Alu 1 294 -17 627 85 0 0 chr2 109904570 109904652 -140783202 + AluSg/x SINE Alu 217 298 -11 227 227 118 67 chr2 109905315 109905434 -140782420 - L1ME4a LINE L1 -24 6097 5973 505 220 156 0 chr2 109906891 109907032 -140780822 - L1ME3 LINE L1 -29 6133 5971 278 258 30 0 chr2 109908356 109908422 -140779432 - MLT1L LTR MaLR -201 414 347 491 276 146 5 chr2 109908496 109908619 -140779235 - MIR SINE MIR -33 229 125 2206 68 44 0 chr2 109908619 109908913 -140778941 + AluY SINE Alu 1 307 -4 491 276 146 5 chr2 109908913 109908974 -140778880 - MIR SINE MIR -137 125 19 897 309 62 21 chr2 109909219 109909591 -140778263 + L3 LINE CR1 590 976 -601 391 221 11 11 chr2 109909610 109909705 -140778149 - L1M4 LINE L1 -5618 924 830 333 296 15 22 chr2 109909733 109909868 -140777986 - L1M4 LINE L1 -6400 142 9 229 278 145 77 chr2 109910013 109910247 -140777607 + L3 LINE CR1 1196 1445 -132 1216 82 13 0 chr2 109910380 109910538 -140777316 - AluSp SINE Alu -22 291 132 2181 93 0 0 chr2 109910543 109910832 -140777022 - AluSg SINE Alu -15 295 7 295 357 14 21 chr2 109911944 109912087 -140775767 + MIR SINE MIR 90 231 -31 506 276 87 0 chr2 109912122 109912318 -140775536 + L2 LINE L2 2379 2591 -723 407 301 95 32 chr2 109912310 109912656 -140775198 + L2 LINE L2 2831 3198 -115 * 343 278 142 0 chr2 109912667 109912829 -140775025 + MER20 DNA MER1_type 33 217 -2 384 276 19 29 chr2 109912833 109912938 -140774916 + L2 LINE L2 3191 3294 -19 223 224 0 0 chr2 109912945 109912994 -140774860 + MIR SINE MIR 214 262 0 454 294 38 38 chr2 109913067 109913278 -140774576 + MIR SINE MIR 2 212 -50 566 310 139 18 chr2 109914227 109914814 -140773040 - L2 LINE L2 -1 3312 2656 1953 151 110 34 chr2 109914814 109915009 -140772845 + MSTB LTR MaLR 1 180 -246 1859 137 3 3 chr2 109915009 109915308 -140772546 + AluJb SINE Alu 1 299 -13 1953 151 110 34 chr2 109915308 109915495 -140772359 + MSTB LTR MaLR 180 412 -14 1318 278 125 45 chr2 109915495 109915823 -140772031 - L2 LINE L2 -655 2659 2359 2074 126 0 0 chr2 109915823 109916116 -140771738 + AluSx SINE Alu 1 293 -19 1318 278 125 45 chr2 109916116 109916434 -140771420 - L2 LINE L2 -955 2359 1961 4300 225 59 18 chr2 109916905 109917818 -140770036 + L1M4c LINE L1 986 1945 -4708 2210 109 0 6 chr2 109917818 109918130 -140769724 + AluSg SINE Alu 1 310 0 4300 225 59 18 chr2 109918130 109918209 -140769645 + L1M4c LINE L1 1945 2019 -4634 478 191 79 118 chr2 109918220 109918526 -140769328 + L1M4c LINE L1 2403 2695 -4039 1868 134 3 7 chr2 109918526 109918809 -140769045 + AluSx SINE Alu 11 292 -20 478 191 79 118 chr2 109918809 109918858 -140768996 + L1M4c LINE L1 2695 2744 -3990 1759 137 4 4 chr2 109918862 109919159 -140768695 + AluSx SINE Alu 14 310 0 2142 99 0 17 chr2 109919185 109919487 -140768367 + AluSg SINE Alu 14 310 0 8657 173 41 89 chr2 109919488 109919651 -140768203 + L1MA9 LINE L1 3031 3200 -3112 2084 99 0 3 chr2 109919651 109919957 -140767897 - AluSq SINE Alu 0 305 1 8657 173 41 89 chr2 109919957 109921771 -140766083 + L1MA9 LINE L1 3200 5099 -1213 284 191 24 60 chr2 109921771 109921855 -140765999 + Tigger2 DNA MER2_type 2410 2490 -228 8657 173 41 89 chr2 109921855 109922494 -140765360 + L1MA9 LINE L1 5099 5767 -545 232 140 0 0 chr2 109922494 109922551 -140765303 + LTR66 LTR ERVL 383 439 -171 8657 173 41 89 chr2 109922551 109922702 -140765152 + L1MA9 LINE L1 5767 5924 -388 320 62 0 21 chr2 109922702 109922750 -140765104 + (TA)n Simple_repeat Simple_repeat 1 47 0 8657 173 41 89 chr2 109922750 109923134 -140764720 + L1MA9 LINE L1 5924 6325 13 2025 100 0 30 chr2 109923134 109923433 -140764421 + AluY SINE Alu 1 290 -21 8657 173 41 89 chr2 109923433 109923500 -140764354 + L1MA9 LINE L1 6325 6233 -79 2321 148 88 0 chr2 109923500 109923586 -140764268 + Tigger2a DNA MER2_type 1 78 -2630 204 40 0 0 chr2 109923586 109923611 -140764243 + (TCC)n Simple_repeat Simple_repeat 2 26 0 2321 148 88 0 chr2 109923611 109923923 -140763931 + Tigger2a DNA MER2_type 78 434 0 8657 173 41 89 chr2 109923923 109923971 -140763883 + L1MA9 LINE L1 6232 6281 -31 265 295 93 0 chr2 109924160 109924289 -140763565 - L2 LINE L2 -184 3088 2948 229 337 43 54 chr2 109924486 109924670 -140763184 - L2 LINE L2 -693 2621 2440 688 213 38 19 chr2 109925256 109925416 -140762438 - LTR67 LTR ERVL 0 557 395 951 203 117 36 chr2 109925423 109925704 -140762150 + MER33 DNA MER1_type 1 304 -20 266 330 19 9 chr2 109925687 109925793 -140762061 - MLT1H LTR MaLR -363 186 80 * 2032 109 0 0 chr2 109926720 109927035 -140760819 - AluSg SINE Alu 0 315 1 255 109 0 0 chr2 109927060 109927106 -140760748 - L1MB4 LINE L1 -1 6179 6134 740 232 7 7 chr2 109927107 109927262 -140760592 + FAM SINE Alu 3 157 -18 2294 84 0 3 chr2 109927262 109927561 -140760293 - AluY SINE Alu -13 298 1 3507 161 6 25 chr2 109927580 109928215 -140759639 - L1MB3 LINE L1 -33 6150 5528 590 150 15 32 chr2 109929693 109929742 -140758112 - L1MB3 LINE L1 -1 6182 6134 2237 88 0 0 chr2 109929742 109930038 -140757816 - AluY SINE Alu -15 296 1 2219 102 0 13 chr2 109930038 109930340 -140757514 - AluSq SINE Alu -14 299 1 590 150 15 32 chr2 109930340 109930695 -140757159 - L1MB3 LINE L1 -47 6136 5670 268 301 73 32 chr2 109930786 109930909 -140756945 - MIR SINE MIR -8 254 127 216 195 158 49 chr2 109931056 109931138 -140756716 - MER5A DNA MER1_type -84 105 15 227 286 161 25 chr2 109931769 109931930 -140755924 - MIR3 SINE MIR -11 197 15 199 261 87 33 chr2 109931964 109931976 -140755878 - MIR SINE MIR -160 102 86 510 241 69 14 chr2 109931976 109932121 -140755733 + MIR SINE MIR 2 154 -108 278 325 88 9 chr2 109932305 109932419 -140755435 + MIR SINE MIR 8 130 -132 1051 82 0 0 chr2 109932419 109932553 -140755301 + AluSg SINE Alu 1 134 -176 2308 77 0 3 chr2 109932553 109932851 -140755003 + AluSc SINE Alu 1 297 -12 2103 199 42 50 chr2 109933425 109933928 -140753926 + LTR54 LTR ERV1 9 507 -3 355 285 13 20 chr2 109933985 109934136 -140753718 - L1MCc LINE L1 -6193 230 81 2444 209 77 51 chr2 109934142 109934846 -140753008 - MER72 LTR ERV1 0 722 1 420 209 181 60 chr2 109935279 109935370 -140752484 + HAL1 LINE L1 1610 1689 -818 2273 141 3 18 chr2 109935370 109935711 -140752143 + MER1B DNA MER1_type 1 336 -1 420 209 181 60 chr2 109935711 109935801 -140752053 + HAL1 LINE L1 1689 1813 -694 2149 94 0 7 chr2 109936448 109936756 -140751098 + AluY SINE Alu 1 306 -5 1385 381 10 0 chr2 109937298 109937600 -140750254 - AluY SINE Alu -6 305 1 212 175 0 0 chr2 109937632 109937672 -140750182 + A-rich Low_complexity Low_complexity 1 40 0 213 167 48 0 chr2 109938249 109938291 -140749563 - L2 LINE L2 -16 3256 3213 589 149 11 0 chr2 109938427 109938521 -140749333 - MER4E LTR ERV1 0 779 685 180 0 0 0 chr2 109938929 109938949 -140748905 + (CCCTG)n Simple_repeat Simple_repeat 5 24 0 229 277 6 145 chr2 109939367 109939430 -140748424 - MIR SINE MIR -69 139 69 243 0 0 0 chr2 109939430 109939457 -140748397 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2101 113 3 3 chr2 109939460 109939760 -140748094 + AluSx SINE Alu 1 300 -12 229 277 6 145 chr2 109939760 109939836 -140748018 - MIR SINE MIR -141 67 45 1367 152 58 26 chr2 109941947 109942184 -140745670 + MER33 DNA MER1_type 2 253 -2332 1836 158 3 7 chr2 109942184 109942488 -140745366 - AluJo SINE Alu -9 303 1 1367 152 58 26 chr2 109942488 109942559 -140745295 + MER33 DNA MER1_type 253 320 -4 25 0 0 0 chr2 109942740 109942765 -140745089 + AT_rich Low_complexity Low_complexity 1 25 0 2389 61 0 0 chr2 109943683 109943979 -140743875 - AluY SINE Alu -13 298 3 1134 70 0 0 chr2 109944590 109944733 -140743121 - AluSq/x SINE Alu -170 143 1 1924 201 65 17 chr2 109945255 109945667 -140742187 + MER70A LTR ERVL 38 469 -3 1266 208 117 40 chr2 109946293 109946358 -140741496 - L1ME2 LINE L1 0 6164 6105 2105 93 24 0 chr2 109946358 109946648 -140741206 + AluSc SINE Alu 1 297 -12 1266 208 117 40 chr2 109946648 109947251 -140740603 - L1ME2 LINE L1 -59 6105 5213 1979 123 20 0 chr2 109947288 109947462 -140740392 - AluSg SINE Alu -2 308 124 261 0 0 0 chr2 109947462 109947491 -140740363 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1979 123 20 0 chr2 109947491 109947617 -140740237 - AluSg SINE Alu -186 124 2 2255 88 3 0 chr2 109947694 109947990 -140739864 - AluSg1 SINE Alu -12 297 1 1420 174 0 57 chr2 109948103 109948401 -140739453 - AluJo SINE Alu -31 281 1 249 253 103 69 chr2 109948645 109948732 -140739122 + L2 LINE L2 3196 3285 -28 198 0 0 0 chr2 109949377 109949399 -140738455 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 1467 188 3 24 chr2 109949478 109949794 -140738060 - AluJo SINE Alu 0 312 3 320 134 85 0 chr2 109949879 109949961 -140737893 + L1ME4a LINE L1 6032 6120 -1 2350 83 0 0 chr2 109950246 109950548 -140737306 - AluSx SINE Alu -10 302 1 1662 129 12 0 chr2 109950567 109950815 -140737039 - L1PB4 LINE L1 -13 6143 5893 2563 44 0 0 chr2 109951775 109952072 -140735782 - AluY SINE Alu -11 300 4 220 229 0 0 chr2 109953548 109953596 -140734258 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 384 313 128 5 chr2 109954045 109954240 -140733614 - MIR SINE MIR -40 222 4 598 294 127 55 chr2 109954342 109954950 -140732904 - L2 LINE L2 -1 3271 2623 466 244 53 49 chr2 109956662 109956887 -140730967 - MLT1H LTR MaLR -258 291 66 2384 71 3 22 chr2 109956932 109957243 -140730611 + AluY SINE Alu 3 307 -4 728 204 22 0 chr2 109957346 109957483 -140730371 - Tigger2 DNA MER2_type -4 2714 2575 241 214 71 0 chr2 109957585 109957641 -140730213 + L2 LINE L2 3254 3313 0 2280 128 0 0 chr2 109957671 109957983 -140729871 - AluSq SINE Alu -1 312 1 623 258 50 11 chr2 109958609 109958791 -140729063 + MER5A DNA MER1_type 1 189 0 2419 73 3 13 chr2 109960450 109960763 -140727091 - AluSg SINE Alu 0 310 1 25 31 0 0 chr2 109961167 109961199 -140726655 + AT_rich Low_complexity Low_complexity 1 32 0 192 391 0 0 chr2 109962450 109962519 -140725335 + L2 LINE L2 3108 3176 -96 213 39 0 0 chr2 109962589 109962615 -140725239 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 180 0 0 0 chr2 109962861 109962881 -140724973 + (A)n Simple_repeat Simple_repeat 1 20 0 2443 101 10 0 chr2 109962891 109963199 -140724655 + AluY SINE Alu 1 311 0 2250 84 7 3 chr2 109963328 109963613 -140724241 + AluY SINE Alu 1 286 -25 28 29 0 0 chr2 109963613 109963648 -140724206 + AT_rich Low_complexity Low_complexity 1 35 0 284 193 118 42 chr2 109963654 109963773 -140724081 - L1ME4a LINE L1 0 6121 5994 1260 166 0 90 chr2 109963778 109964079 -140723775 - AluJo SINE Alu 0 312 39 429 306 28 17 chr2 109964153 109964333 -140723521 - L1ME4a LINE L1 -196 5925 5744 852 244 75 53 chr2 109964421 109964708 -140723146 - HAL1 LINE L1 -82 2425 2127 1325 171 238 7 chr2 109964708 109965007 -140722847 - MLT1A2 LTR MaLR -2 372 5 852 244 75 53 chr2 109965007 109965079 -140722775 - HAL1 LINE L1 -380 2127 2058 575 255 133 23 chr2 109965080 109965343 -140722511 - MLT2F LTR ERVL -333 330 39 2050 251 123 89 chr2 109965347 109966683 -140721171 - HAL1 LINE L1 -652 1855 474 2494 66 0 0 chr2 109966903 109967208 -140720646 + AluY SINE Alu 1 305 -6 2099 103 46 0 chr2 109967866 109968147 -140719707 - AluSg SINE Alu -16 294 1 306 246 84 108 chr2 109969003 109969110 -140718744 + MIR SINE MIR 36 139 -123 2427 97 0 0 chr2 109969110 109969419 -140718435 + AluSc SINE Alu 1 309 0 306 246 84 108 chr2 109969419 109969478 -140718376 + MIR SINE MIR 139 198 -64 1653 97 3 91 chr2 109969478 109969746 -140718108 + Tigger2a DNA MER2_type 1 240 -2468 2301 126 0 0 chr2 109969746 109970056 -140717798 + AluSx SINE Alu 1 310 -2 1653 97 3 91 chr2 109970056 109970096 -140717758 + Tigger2a DNA MER2_type 240 282 -152 996 89 0 0 chr2 109970196 109970319 -140717535 - AluSp SINE Alu -190 123 1 587 175 0 0 chr2 109970563 109970660 -140717194 + LTR8A LTR ERV1 1 97 -630 2116 194 54 22 chr2 109970934 109971471 -140716383 - L1MB4 LINE L1 -2 6178 5625 2492 54 30 0 chr2 109971620 109971917 -140715937 + AluY SINE Alu 1 306 -5 315 264 46 0 chr2 109971999 109972086 -140715768 - MER94 DNA DNA -2 132 42 1611 178 27 20 chr2 109972234 109972532 -140715322 - AluJo SINE Alu -10 302 3 1112 89 82 0 chr2 109972890 109973036 -140714818 + AluY SINE Alu 1 158 -153 2117 139 7 3 chr2 109973067 109973369 -140714485 + AluSx SINE Alu 1 303 -9 1915 170 0 3 chr2 109974093 109974399 -140713455 + AluJb SINE Alu 1 305 -7 189 315 0 37 chr2 109974881 109974935 -140712919 - L3b LINE CR1 -26 1557 1506 324 70 0 0 chr2 109975028 109975071 -140712783 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 916 126 0 0 chr2 109975071 109975190 -140712664 - FLAM_C SINE Alu -24 119 1 230 0 0 32 chr2 109975237 109975268 -140712586 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 235 162 0 0 chr2 109976089 109976126 -140711728 - L2 LINE L2 0 3272 3236 272 274 0 0 chr2 109976566 109976628 -140711226 + L2 LINE L2 3210 3271 -1 183 42 0 0 chr2 109976847 109976871 -140710983 + (TTG)n Simple_repeat Simple_repeat 2 25 0 704 126 48 0 chr2 109976884 109976987 -140710867 - FLAM_A SINE Alu -34 108 1 446 225 56 7 chr2 109977234 109977381 -140710473 - MLT1A1 LTR MaLR -3 362 247 270 306 121 8 chr2 109977462 109977586 -140710268 - MLT1A1 LTR MaLR -186 179 42 1819 195 131 10 chr2 109979468 109979784 -140708070 - LOR1b LTR ERV1 0 461 185 2230 89 3 10 chr2 109979784 109980076 -140707778 + AluSx SINE Alu 9 298 -14 2210 85 3 38 chr2 109980086 109980402 -140707452 + AluSc SINE Alu 1 305 -4 1819 195 131 10 chr2 109980402 109980485 -140707369 - LOR1b LTR ERV1 -283 178 1 718 284 35 46 chr2 109981399 109981769 -140706085 + L1MDa LINE L1 18 383 -6157 915 192 93 27 chr2 109981906 109982239 -140705615 + L1MDa LINE L1 1644 1998 -4542 * 4763 261 53 14 chr2 109982213 109982832 -140705022 + L1M4 LINE L1 3771 4364 -2176 2047 151 6 19 chr2 109982832 109982968 -140704886 + AluJo SINE Alu 1 137 -175 1943 140 0 18 chr2 109982968 109983282 -140704572 + AluSx SINE Alu 1 309 0 2047 151 6 19 chr2 109983282 109983456 -140704398 + AluJo SINE Alu 137 308 -4 4763 261 53 14 chr2 109983456 109984421 -140703433 + L1M4 LINE L1 4364 5417 -1123 842 173 14 0 chr2 109984460 109984599 -140703255 + AluJb SINE Alu 1 141 -171 30 0 0 0 chr2 109984614 109984644 -140703210 + AT_rich Low_complexity Low_complexity 1 30 0 481 226 27 41 chr2 109984644 109984790 -140703064 + L1M4 LINE L1 5547 5690 -850 557 247 65 23 chr2 109984801 109985040 -140702814 - L1MC/D LINE L1 -576 5659 5461 2131 184 15 7 chr2 109985041 109985444 -140702410 + MLT2D LTR ERVL 1 406 -8 2407 75 0 3 chr2 109985464 109985756 -140702098 - AluSc SINE Alu -18 291 1 33 56 0 0 chr2 109985832 109985886 -140701968 + AT_rich Low_complexity Low_complexity 1 54 0 3006 265 44 61 chr2 109985914 109986881 -140700973 - L1MC/D LINE L1 -824 5391 4409 2507 71 0 3 chr2 109986881 109987190 -140700664 + AluY SINE Alu 1 308 -3 3006 265 44 61 chr2 109987190 109987633 -140700221 - L1MC/D LINE L1 -1806 4409 4013 2019 104 3 60 chr2 109987633 109987949 -140699905 - AluSx SINE Alu -14 298 1 3006 265 44 61 chr2 109987949 109988260 -140699594 - L1MC/D LINE L1 -2202 4013 3698 371 281 163 20 chr2 109988300 109988496 -140699358 - L1MC/D LINE L1 -4807 1589 1366 2146 104 28 0 chr2 109989456 109989743 -140698111 - AluSx SINE Alu -17 295 1 2262 81 0 11 chr2 109990349 109990657 -140697197 + AluY SINE Alu 3 307 0 26 0 0 0 chr2 109992102 109992128 -140695726 + AT_rich Low_complexity Low_complexity 1 26 0 2529 78 0 0 chr2 109992132 109992441 -140695413 + AluY SINE Alu 1 309 -2 264 159 0 0 chr2 109992656 109992700 -140695154 - MSTD LTR MaLR -352 44 1 1673 178 92 22 chr2 109994392 109994762 -140693092 - MSTD LTR MaLR 0 396 1 311 222 14 0 chr2 109994956 109995028 -140692826 + MER58 DNA MER1_type 2348 2420 0 710 169 169 6 chr2 109995201 109995361 -140692493 + MER5A DNA MER1_type 4 189 0 196 204 23 0 chr2 109995591 109995635 -140692219 - L2 LINE L2 0 3313 3269 22 35 0 0 chr2 110046277 110046306 -140641548 + AT_rich Low_complexity Low_complexity 1 29 0 278 219 61 0 chr2 110047984 110048066 -140639788 - MER113 DNA MER1_type? -359 162 76 2766 150 51 87 chr2 110048119 110048245 -140639609 + L1MA9 LINE L1 5656 5785 -527 1904 149 0 36 chr2 110048245 110048571 -140639283 + AluJo SINE Alu 1 315 0 2766 150 51 87 chr2 110048571 110049122 -140638732 + L1MA9 LINE L1 5785 6312 0 229 250 25 38 chr2 110050695 110050775 -140637079 + MIR SINE MIR 24 102 -160 210 37 0 0 chr2 110053060 110053087 -140634767 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 273 226 113 48 chr2 110053424 110053548 -140634306 - MER20 DNA MER1_type -82 137 6 263 241 55 84 chr2 110053561 110053731 -140634123 - L1MC4 LINE L1 -450 7592 7326 1627 211 3 19 chr2 110053789 110054102 -140633752 + AluJb SINE Alu 5 312 0 1698 122 94 49 chr2 110054121 110054407 -140633447 - AluSx SINE Alu -13 299 1 2453 87 0 3 chr2 110055068 110055378 -140632476 + AluY SINE Alu 1 309 -2 1607 174 7 35 chr2 110055386 110055673 -140632181 + AluJo SINE Alu 1 279 -33 234 253 263 0 chr2 110056903 110056998 -140630856 - L2 LINE L2 0 3272 3153 852 232 201 38 chr2 110057094 110057547 -140630307 + MLT1G1 LTR MaLR 1 595 0 664 231 137 0 chr2 110058190 110058372 -140629482 + MER63A DNA MER1_type 1 207 -3 2206 204 79 0 chr2 110058679 110059199 -140628655 - L1MB3 LINE L1 -2 6181 5621 212 304 11 43 chr2 110060161 110060253 -140627601 + L3 LINE CR1 630 718 -859 2197 113 10 3 chr2 110060500 110060802 -140627052 - AluSx SINE Alu -8 304 1 22 35 0 0 chr2 110062458 110062487 -140625367 + GC_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr2 110062725 110062767 -140625087 + GC_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 110062800 110062824 -140625030 + GC_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 110063569 110063594 -140624260 + AT_rich Low_complexity Low_complexity 1 25 0 28 29 0 0 chr2 110066208 110066243 -140621611 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 110066531 110066552 -140621302 + AT_rich Low_complexity Low_complexity 1 21 0 406 277 193 6 chr2 110066891 110067057 -140620797 - MIR SINE MIR -10 252 56 197 322 200 0 chr2 110067367 110067482 -140620372 - MIR SINE MIR -52 210 73 229 355 171 7 chr2 110068169 110068321 -140619533 + MIR SINE MIR 51 227 -35 262 219 16 0 chr2 110068443 110068507 -140619347 + (TG)n Simple_repeat Simple_repeat 1 65 0 233 305 51 0 chr2 110069787 110069846 -140618008 - L2 LINE L2 -5 3267 3206 2062 98 7 43 chr2 110070837 110071142 -140616712 - AluSg SINE Alu -16 294 1 407 316 47 16 chr2 110071620 110071810 -140616044 - L2 LINE L2 0 3313 3118 22 0 0 0 chr2 110072369 110072391 -140615463 + AT_rich Low_complexity Low_complexity 1 22 0 2303 87 13 3 chr2 110073193 110073492 -140614362 - AluY SINE Alu -9 302 1 707 293 162 25 chr2 110077370 110078051 -140609803 + L2 LINE L2 2501 3276 -37 1977 120 72 0 chr2 110078860 110079136 -140608718 - AluSx SINE Alu -12 300 5 288 122 41 20 chr2 110079936 110080034 -140607820 + (TG)n Simple_repeat Simple_repeat 1 100 0 2265 109 3 0 chr2 110081533 110081836 -140606018 - AluSx SINE Alu -8 304 1 2043 188 34 74 chr2 110082358 110082585 -140605269 - L1MA10 LINE L1 -1 6333 6098 1471 114 5 0 chr2 110082585 110082778 -140605076 + AluSp SINE Alu 106 299 -14 2043 188 34 74 chr2 110082778 110083102 -140604752 - L1MA10 LINE L1 -236 6098 5804 343 151 12 70 chr2 110083280 110083366 -140604488 - Charlie5 DNA MER1_type -2487 125 45 9722 30 0 1 chr2 110086083 110087996 -140599858 - L1PA2 LINE L1 0 6155 4244 15387 30 6 0 chr2 110087996 110089928 -140597926 + L1P LINE L1 1970 3912 -2234 1676 176 126 25 chr2 110090651 110091009 -140596845 - MSTD LTR MaLR 0 396 3 24 53 0 0 chr2 110091276 110091314 -140596540 + AT_rich Low_complexity Low_complexity 1 38 0 214 265 0 0 chr2 110091974 110092023 -140595831 - MIR3 SINE MIR -51 157 109 356 233 92 33 chr2 110092241 110092361 -140595493 - MIR SINE MIR -47 215 89 204 228 79 119 chr2 110092424 110092525 -140595329 + MIR SINE MIR 49 145 -117 842 297 13 0 chr2 110094760 110094992 -140592862 - MIR SINE MIR -20 242 8 1278 217 112 0 chr2 110095962 110096275 -140591579 + MER7A DNA MER2_type 1 346 0 2046 102 15 0 chr2 110097898 110098163 -140589691 - AluSg SINE Alu -7 303 35 2366 98 0 0 chr2 110098708 110099004 -140588850 - AluSq SINE Alu -17 296 1 202 286 0 20 chr2 110099361 110099410 -140588444 - L2 LINE L2 -8 3264 3217 396 215 108 1 chr2 110099516 110099642 -140588212 - MER58B DNA MER1_type -1 340 204 994 214 85 16 chr2 110101817 110102243 -140585611 - L1MB7 LINE L1 -4 6158 5686 213 198 33 110 chr2 110102407 110102498 -140585356 + MER91A DNA MER1_type 9 92 -104 681 259 40 5 chr2 110105375 110105576 -140582278 - MIR SINE MIR -32 230 23 398 261 52 30 chr2 110105744 110105878 -140581976 + MIR SINE MIR 13 149 -113 415 162 81 9 chr2 110106000 110106111 -140581743 + MER45C DNA AcHobo 59 177 -776 * 527 274 186 24 chr2 110106090 110106342 -140581512 + MER45C DNA AcHobo 659 951 -2 1131 199 42 62 chr2 110106885 110107192 -140580662 - MLT1A1 LTR MaLR 0 365 65 937 228 94 0 chr2 110107190 110107423 -140580431 - MER7A DNA MER2_type -93 253 1 * 1452 74 11 0 chr2 110107496 110107672 -140580182 + AluY SINE Alu 3 180 -131 592 71 0 0 chr2 110107673 110107743 -140580111 + AluY SINE Alu 217 286 -25 1620 0 0 0 chr2 110107747 110108174 -140579680 + (GAATG)n Satellite Satellite 1 427 0 238 237 17 0 chr2 110108188 110108247 -140579607 - MLT1A1 LTR MaLR -314 60 1 310 172 126 16 chr2 110108266 110108401 -140579453 + MER20 DNA MER1_type 31 216 -3 324 240 25 16 chr2 110109177 110109298 -140578556 - MER45C DNA AcHobo -130 823 702 221 294 59 12 chr2 110112571 110112656 -140575198 + MIR SINE MIR 56 144 -118 246 270 110 0 chr2 110113466 110113566 -140574288 - L2 LINE L2 -23 3290 3180 191 319 121 11 chr2 110114028 110114119 -140573735 - L2 LINE L2 -23 3290 3190 402 241 120 0 chr2 110114337 110114495 -140573359 - MER5B DNA MER1_type -1 177 1 210 299 48 64 chr2 110114580 110114767 -140573087 - L2 LINE L2 -260 3012 2829 662 217 56 67 chr2 110114896 110115076 -140572778 - MIR SINE MIR -64 198 21 188 203 145 0 chr2 110115111 110115180 -140572674 - L2 LINE L2 -1836 1478 1400 1047 226 75 16 chr2 110115821 110116127 -140571727 - MER33 DNA MER1_type 0 324 1 351 204 112 0 chr2 110118275 110118373 -140569481 - MER45A DNA AcHobo 0 178 70 2360 76 3 7 chr2 110119692 110119993 -140567861 - AluY SINE Alu -11 300 1 2366 96 10 0 chr2 110120842 110121135 -140566719 - AluSq SINE Alu -17 296 1 190 269 77 19 chr2 110121983 110122035 -140565819 - MIR3 SINE MIR -145 63 9 290 314 191 10 chr2 110122369 110122563 -140565291 - MIR SINE MIR -2 260 32 193 356 14 0 chr2 110123185 110123258 -140564596 - MIR SINE MIR -20 242 169 1949 111 0 4 chr2 110123265 110123527 -140564327 + AluSx SINE Alu 40 300 -12 3503 137 27 0 chr2 110123970 110124483 -140563371 + MER1A DNA MER1_type 1 527 0 377 276 68 73 chr2 110124941 110125125 -140562729 - MIR SINE MIR -66 196 5 1635 163 123 8 chr2 110125939 110126296 -140561558 - MSTB1 LTR MaLR -33 399 2 21 0 0 0 chr2 110126783 110126804 -140561050 + AT_rich Low_complexity Low_complexity 1 21 0 2217 28 3 5 chr2 110126804 110127191 -140560663 - L1PA4 LINE L1 0 6155 5582 2896 6 0 3 chr2 110127779 110128090 -140559764 - AluYa5 SINE Alu -1 310 1 1558 201 3 29 chr2 110128561 110128875 -140558979 - AluJo SINE Alu -6 306 1 608 276 38 38 chr2 110128992 110129202 -140558652 + MER63A DNA MER1_type 1 210 0 2142 112 49 0 chr2 110130589 110130875 -140556979 + AluSc SINE Alu 1 300 -9 2128 114 7 0 chr2 110131946 110132263 -140555591 - AluY SINE Alu 0 319 1 226 242 65 0 chr2 110132275 110132337 -140555517 + L2 LINE L2 3182 3247 -66 866 46 15 15 chr2 110134604 110134734 -140553120 + (TTCTC)n Simple_repeat Simple_repeat 5 134 0 2185 117 7 13 chr2 110134735 110135042 -140552812 - AluSx SINE Alu -7 305 1 269 231 0 0 chr2 110135092 110135144 -140552710 - L2 LINE L2 0 3313 3262 269 158 86 52 chr2 110137417 110137515 -140550339 + L1ME4a LINE L1 1243 6094 -5 261 294 9 46 chr2 110137908 110138017 -140549837 + MER58B DNA MER1_type 213 317 -24 189 350 0 41 chr2 110140482 110140579 -140547275 - L2 LINE L2 -2 3270 3178 1779 182 0 17 chr2 110140840 110141137 -140546717 + AluJo SINE Alu 1 292 -20 229 220 41 29 chr2 110141373 110141456 -140546398 + MIR SINE MIR 21 107 -104 297 0 0 0 chr2 110143394 110143427 -140544427 + (TG)n Simple_repeat Simple_repeat 2 34 0 249 242 128 94 chr2 110143725 110143850 -140544004 - MIR3 SINE MIR -52 156 24 1020 198 185 40 chr2 110143850 110144223 -140543631 - MSTC LTR MaLR 0 428 2 249 242 128 94 chr2 110144223 110144246 -140543608 - MIR3 SINE MIR -184 24 3 2292 126 19 22 chr2 110144853 110145218 -140542636 + THE1B LTR MaLR 1 364 0 1118 223 23 0 chr2 110145566 110145826 -140542028 - L1MD3 LINE L1 0 7995 7730 251 304 87 0 chr2 110146207 110146299 -140541555 - L2 LINE L2 -36 3236 3137 258 310 45 45 chr2 110146469 110146669 -140541185 - MLT1L LTR MaLR 0 615 416 264 235 44 0 chr2 110146778 110146846 -140541008 - MLT1L LTR MaLR -328 287 217 188 290 87 14 chr2 110147080 110147149 -140540705 - L2 LINE L2 -530 2784 2711 258 81 0 0 chr2 110147149 110147186 -140540668 + (GTGTG)n Simple_repeat Simple_repeat 3 39 0 234 321 137 15 chr2 110147508 110147639 -140540215 - L2 LINE L2 -996 2318 2172 435 94 31 0 chr2 110147765 110147829 -140540025 + L1PA6 LINE L1 6087 6152 -2 326 265 34 60 chr2 110148055 110148172 -140539682 + MIR SINE MIR 27 140 -68 318 295 29 0 chr2 110149585 110149690 -140538164 - MLT2E LTR ERVL -490 138 31 223 300 75 8 chr2 110149706 110149826 -140538028 - MIR SINE MIR -39 223 96 2404 137 43 9 chr2 110150135 110150572 -140537282 - L1MB3 LINE L1 0 6183 5732 4971 218 50 14 chr2 110152786 110154511 -140533343 + L1MB4 LINE L1 4102 5884 -296 997 123 18 68 chr2 110154569 110154671 -140533183 - L1MB3 LINE L1 -789 5514 5427 2275 116 3 0 chr2 110154671 110154973 -140532881 + AluSx SINE Alu 1 303 -9 997 123 18 68 chr2 110154973 110155089 -140532765 - L1MB3 LINE L1 -876 5427 5307 4445 139 38 1 chr2 110155089 110155853 -140532001 + L1MA4A LINE L1 5505 6296 -7 991 161 0 31 chr2 110157219 110157381 -140530473 + AluJb SINE Alu 135 291 -21 323 259 25 12 chr2 110157419 110157500 -140530354 - MIR3 SINE MIR -13 195 114 729 188 5 109 chr2 110157826 110157947 -140529907 + MER3 DNA MER1_type 25 118 -91 2165 115 3 0 chr2 110157947 110158234 -140529620 + AluSx SINE Alu 2 289 -23 729 188 5 109 chr2 110158234 110158314 -140529540 + MER3 DNA MER1_type 118 205 -4 318 226 179 19 chr2 110158459 110158565 -140529289 + MIR3 SINE MIR 73 195 -13 886 179 6 23 chr2 110159129 110159302 -140528552 - AluJb SINE Alu -9 303 134 289 280 30 0 chr2 110160273 110160373 -140527481 - MLT1K LTR MaLR -77 511 409 714 241 67 31 chr2 110161785 110162009 -140525845 - MER21B LTR ERV1 -44 819 588 1351 259 88 36 chr2 110162027 110162471 -140525383 - MER21B LTR ERV1 -378 485 19 471 165 9 87 chr2 110162469 110162584 -140525270 - MER21B LTR ERV1 -757 106 1 * 579 216 216 5 chr2 110162640 110162848 -140525006 - L1MC3 LINE L1 -61 7724 7473 961 182 100 0 chr2 110162848 110163068 -140524786 - MER74A LTR ERVL -316 242 1 740 140 43 81 chr2 110163068 110163181 -140524673 - L1MB4 LINE L1 -243 5937 5832 2580 77 0 0 chr2 110163181 110163492 -140524362 - AluY SINE Alu 0 311 1 740 140 43 81 chr2 110163492 110163564 -140524290 - L1MB4 LINE L1 -348 5832 5759 406 235 0 0 chr2 110163568 110163653 -140524201 + Tigger5 DNA MER2_type 1 85 -2238 1901 164 6 13 chr2 110163662 110163974 -140523880 + AluSx SINE Alu 1 310 -2 353 188 0 0 chr2 110163996 110164060 -140523794 - Tigger5 DNA MER2_type -7 2316 2253 387 227 0 11 chr2 110164082 110164170 -140523684 + Tigger5 DNA MER2_type 2237 2323 0 672 163 16 8 chr2 110165225 110165348 -140522506 - L1MB8 LINE L1 -6 6172 6049 1284 221 103 3 chr2 110165349 110165679 -140522175 - L1MB8 LINE L1 -357 5821 5459 391 300 71 24 chr2 110165756 110165926 -140521928 + MIR SINE MIR 74 251 -11 1997 235 61 25 chr2 110166205 110166301 -140521553 - L1ME1 LINE L1 -4 6162 6071 3189 174 153 31 chr2 110166301 110167037 -140520817 - LTR1B LTR ERV1 0 826 1 1997 235 61 25 chr2 110167037 110167531 -140520323 - L1ME1 LINE L1 -95 6071 5551 236 313 118 0 chr2 110167652 110167796 -140520058 + MER103 DNA DNA 3 163 -3 394 301 14 7 chr2 110167900 110168043 -140519811 - MLT1I LTR MaLR 0 409 266 255 303 101 0 chr2 110168123 110168242 -140519612 - MLT1I LTR MaLR -278 131 1 297 216 165 0 chr2 110168797 110168894 -140518960 + MER94 DNA DNA 19 131 -3 227 298 119 67 chr2 110170671 110170861 -140516993 + L1ME LINE L1 5378 5557 -564 1517 112 31 9 chr2 110170861 110171085 -140516769 - MER30 DNA MER1_type 0 230 2 227 298 119 67 chr2 110171085 110171313 -140516541 + L1ME LINE L1 5557 5818 -303 1274 193 128 0 chr2 110171328 110171593 -140516261 + AluJo SINE Alu 8 306 -6 450 0 0 0 chr2 110171820 110171870 -140515984 + (TG)n Simple_repeat Simple_repeat 1 50 0 366 143 0 0 chr2 110171874 110171930 -140515924 - AluS SINE Alu -19 282 227 332 274 10 20 chr2 110173483 110173585 -140514269 + MIR SINE MIR 47 147 -61 1730 116 60 12 chr2 110173589 110173839 -140514015 + AluSx SINE Alu 1 262 -50 209 57 29 0 chr2 110173839 110173874 -140513980 + (CAAA)n Simple_repeat Simple_repeat 4 39 0 205 265 15 15 chr2 110174250 110174318 -140513536 + CT-rich Low_complexity Low_complexity 1 68 0 1316 46 0 0 chr2 110175140 110175292 -140512562 - AluY SINE Alu -15 296 145 417 266 95 25 chr2 110175578 110175736 -140512118 - MER5B DNA MER1_type -5 173 5 272 313 118 32 chr2 110176829 110177240 -140510614 - L2 LINE L2 -101 3212 2693 219 154 26 0 chr2 110177241 110177280 -140510574 + (TGAG)n Simple_repeat Simple_repeat 1 40 0 451 290 125 16 chr2 110179363 110179528 -140508326 + MIR SINE MIR 5 182 -58 2017 195 6 3 chr2 110179539 110179903 -140507951 - MLT1A1 LTR MaLR 0 365 1 367 213 72 65 chr2 110181085 110181386 -140506468 - MLT1H LTR MaLR 0 575 132 409 279 26 63 chr2 110181587 110181777 -140506077 - L1M4 LINE L1 -972 5174 4992 628 179 11 33 chr2 110182061 110182245 -140505609 + CT-rich Low_complexity Low_complexity 1 180 0 462 65 0 0 chr2 110182248 110182310 -140505544 + (TCCTG)n Simple_repeat Simple_repeat 4 65 0 1263 192 13 13 chr2 110182323 110182547 -140505307 - AluJo SINE Alu -88 224 1 2225 87 13 29 chr2 110182821 110183197 -140504657 - AluY SINE Alu 0 311 122 180 97 0 0 chr2 110183197 110183228 -140504626 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2225 87 13 29 chr2 110183228 110183349 -140504505 - AluY SINE Alu -189 122 1 32 0 0 0 chr2 110183834 110183866 -140503988 + AT_rich Low_complexity Low_complexity 1 32 0 210 71 0 0 chr2 110183955 110183983 -140503871 + (TAA)n Simple_repeat Simple_repeat 2 29 0 21 57 0 0 chr2 110184271 110184306 -140503548 + AT_rich Low_complexity Low_complexity 1 35 0 2263 104 0 16 chr2 110184363 110184672 -140503182 - AluSx SINE Alu -8 304 1 21 0 0 0 chr2 110185172 110185193 -140502661 + AT_rich Low_complexity Low_complexity 1 21 0 1663 186 10 26 chr2 110185328 110185634 -140502220 + AluJb SINE Alu 3 303 -9 520 238 0 0 chr2 110185839 110185940 -140501914 + MER81 DNA DNA 1 101 -13 1629 153 39 53 chr2 110185946 110186305 -140501549 - MER47A DNA MER2_type -12 354 1 2178 116 30 7 chr2 110186381 110186684 -140501170 - AluSx SINE Alu -2 310 1 335 225 0 42 chr2 110187348 110187419 -140500435 + MER91B DNA MER1_type 17 84 -106 774 210 195 0 chr2 110187645 110187850 -140500004 + MIR SINE MIR 8 252 -10 195 186 0 0 chr2 110188482 110188525 -140499329 + (TG)n Simple_repeat Simple_repeat 1 43 0 403 146 28 35 chr2 110190684 110190828 -140497026 + GA-rich Low_complexity Low_complexity 3 145 0 189 259 71 35 chr2 110195148 110195233 -140492621 - MIR3 SINE MIR -3 205 118 23 0 0 0 chr2 110195238 110195261 -140492593 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 110196178 110196199 -140491655 + AT_rich Low_complexity Low_complexity 1 21 0 2154 122 0 41 chr2 110196209 110196529 -140491325 - AluSx SINE Alu -5 307 1 359 332 20 25 chr2 110196577 110196821 -140491033 - L1M4c LINE L1 -4543 1841 1599 2269 91 0 10 chr2 110197068 110197365 -140490489 + AluY SINE Alu 1 294 -17 506 130 58 29 chr2 110199385 110199731 -140488123 + (TG)n Simple_repeat Simple_repeat 1 355 0 1680 189 6 18 chr2 110202013 110202351 -140485503 + MER47A DNA MER2_type 33 366 0 1903 127 8 0 chr2 110202908 110203175 -140484679 + AluSx SINE Alu 1 269 -43 185 267 67 0 chr2 110204417 110204462 -140483392 - MIR SINE MIR -15 247 200 2714 179 23 6 chr2 110207686 110208210 -140479644 + L1MB5 LINE L1 5634 6166 -8 698 105 53 0 chr2 110208284 110208398 -140479456 + L1MB5 LINE L1 6047 6166 -8 203 306 16 0 chr2 110210415 110210477 -140477377 - L2 LINE L2 -10 3262 3200 1861 155 7 14 chr2 110211302 110211599 -140476255 + AluJb SINE Alu 1 295 -17 308 206 245 0 chr2 110213660 110213762 -140474092 - MIR3 SINE MIR -14 194 68 299 303 101 50 chr2 110214208 110214446 -140473408 - MIR SINE MIR -12 250 1 197 343 22 37 chr2 110217092 110217226 -140470628 - MIR3 SINE MIR -62 146 15 247 320 31 0 chr2 110220025 110220122 -140467732 + MER46C DNA MER2_type 12 111 -227 184 306 14 42 chr2 110220479 110220551 -140467303 + MIR SINE MIR 109 178 -84 390 307 96 24 chr2 110221097 110221348 -140466506 + LTR33 LTR ERVL 248 516 -5 274 299 0 52 chr2 110223567 110223664 -140464190 + MIR3 SINE MIR 95 186 -22 369 266 0 18 chr2 110223766 110223875 -140463979 - MER5A DNA MER1_type -80 109 3 195 304 104 52 chr2 110224608 110224743 -140463111 + L2 LINE L2 3153 3294 -19 2419 87 3 0 chr2 110225614 110225912 -140461942 - AluY SINE Alu -12 299 1 445 297 126 40 chr2 110225932 110226312 -140461542 - L1ME4a LINE L1 -1 6120 5708 2299 107 3 0 chr2 110226477 110226777 -140461077 - AluSq SINE Alu -8 305 5 2111 128 3 28 chr2 110228030 110228349 -140459505 + AluSx SINE Alu 2 312 0 325 300 83 33 chr2 110228708 110228888 -140458966 - MIR SINE MIR -6 256 68 459 302 47 6 chr2 110228983 110229155 -140458699 - MIR SINE MIR -55 207 29 185 297 129 34 chr2 110229854 110229975 -140457879 + L2 LINE L2 2545 2653 -661 1954 143 0 44 chr2 110229975 110230290 -140457564 - AluSq SINE Alu -12 301 1 185 297 129 34 chr2 110230290 110230377 -140457477 + L2 LINE L2 2653 2773 -541 2336 201 41 38 chr2 110231167 110231778 -140456076 - L1MB5 LINE L1 0 6174 5562 289 318 0 0 chr2 110233836 110233921 -140453933 - MER3 DNA MER1_type -124 85 1 2576 193 123 5 chr2 110235357 110235958 -140451896 - L1MC2 LINE L1 -13 6331 5660 312 274 211 10 chr2 110239628 110239825 -140448029 + MIR SINE MIR 3 233 -29 333 313 10 0 chr2 110240876 110240972 -140446882 + GA-rich Low_complexity Low_complexity 6 102 0 3207 186 56 3 chr2 110242660 110243339 -140444515 - L1MB7 LINE L1 -47 6137 5423 222 37 0 0 chr2 110244127 110244154 -140443700 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 990 176 6 0 chr2 110244155 110244320 -140443534 - FRAM SINE Alu 0 166 1 397 269 37 22 chr2 110244364 110244498 -140443356 - L3 LINE CR1 -76 1501 1366 343 353 73 34 chr2 110244964 110245168 -140442686 - L1ME3 LINE L1 -216 5946 5735 815 238 31 27 chr2 110245257 110245520 -140442334 - L1MB5 LINE L1 -608 5556 5298 237 354 79 22 chr2 110245557 110245735 -140442119 - MIR SINE MIR -41 221 34 783 292 150 30 chr2 110245759 110246626 -140441228 - L1MB5 LINE L1 -866 5280 4310 1152 289 44 39 chr2 110246705 110247366 -140440488 - L1MC5 LINE L1 -30 7931 7268 395 195 35 6 chr2 110249393 110249562 -140438292 + (TGGA)n Simple_repeat Simple_repeat 4 177 0 183 286 79 0 chr2 110249719 110249782 -140438072 + L2 LINE L2 3200 3267 -5 494 260 46 78 chr2 110250315 110250596 -140437258 + L2 LINE L2 3042 3313 0 647 219 89 12 chr2 110252323 110252492 -140435362 + MER58A DNA MER1_type 43 224 0 686 254 13 45 chr2 110252492 110252716 -140435138 + MIR SINE MIR 9 225 -37 1626 157 42 51 chr2 110252894 110253206 -140434648 + AluJb SINE Alu 3 311 -1 536 293 28 36 chr2 110254343 110254596 -140433258 + L2 LINE L2 3063 3313 0 465 332 212 24 chr2 110457252 110458126 -140229728 + L2 LINE L2 1931 2968 -346 1138 187 5 1 chr2 110458417 110459293 -140228561 - ALR/Alpha Satellite centromeric 0 879 1 1164 153 5 1 chr2 110459537 110460537 -140227317 - ALR/Alpha Satellite centromeric 0 1004 1 1167 143 11 0 chr2 110460671 110461743 -140226111 - ALR/Alpha Satellite centromeric -1 1083 1 8103 32 1 1 chr2 110462129 110463613 -140224241 + L1PA4 LINE L1 4435 5919 -236 2745 110 5 3 chr2 110463613 110463985 -140223869 + L1PA11 LINE L1 5793 6167 -7 292 197 183 29 chr2 110464310 110464447 -140223407 + MLT1L LTR MaLR 378 535 -80 444 229 83 131 chr2 110465491 110465828 -140222026 + HAL1 LINE L1 763 1083 -1424 1895 104 96 4 chr2 110465836 110466106 -140221748 + AluSx SINE Alu 1 295 -17 495 194 19 10 chr2 110466195 110466298 -140221556 + AluJb SINE Alu 173 276 -36 475 254 91 46 chr2 110466330 110466527 -140221327 + HAL1 LINE L1 1156 1361 -1146 2345 79 7 0 chr2 110466657 110466949 -140220905 + AluY SINE Alu 1 294 -17 2035 134 3 0 chr2 110466963 110467255 -140220599 + AluSx SINE Alu 1 293 -19 247 260 13 0 chr2 110468254 110468331 -140219523 - L1MC4a LINE L1 -1 7807 7730 1653 185 33 31 chr2 110468465 110468855 -140218999 - L1ME2 LINE L1 -8 6156 5766 261 346 0 15 chr2 110469122 110469255 -140218599 - L1MDb LINE L1 -5514 895 765 1826 142 20 26 chr2 110470707 110471010 -140216844 - AluJb SINE Alu -11 301 1 1077 266 16 139 chr2 110471246 110471401 -140216453 - L1 LINE L1 -1199 4947 4775 1795 121 68 11 chr2 110471401 110471681 -140216173 - AluSx SINE Alu -16 296 1 1077 266 16 139 chr2 110471681 110471886 -140215968 - L1 LINE L1 -1371 4775 4546 1543 120 0 0 chr2 110471886 110472095 -140215759 - AluSq SINE Alu -104 209 1 2421 84 0 0 chr2 110472105 110472402 -140215452 - AluY SINE Alu -14 297 1 1077 266 16 139 chr2 110472402 110472684 -140215170 - L1 LINE L1 -1610 4536 4400 2087 104 7 17 chr2 110472684 110472982 -140214872 - AluSq SINE Alu -18 295 1 1077 266 16 139 chr2 110472982 110473100 -140214754 - L1 LINE L1 -1746 4400 4269 379 205 0 26 chr2 110473094 110473172 -140214682 - L1ME2 LINE L1 -863 5496 5421 * 22 35 0 0 chr2 110473467 110473496 -140214358 + AT_rich Low_complexity Low_complexity 1 29 0 300 324 27 65 chr2 110473581 110473707 -140214147 + L1ME LINE L1 5556 5685 -436 1693 139 0 107 chr2 110473707 110473906 -140213948 + AluJb SINE Alu 1 220 -92 2328 83 0 0 chr2 110473906 110474194 -140213660 + AluY SINE Alu 3 290 -21 1693 139 0 107 chr2 110474194 110474301 -140213553 + AluJb SINE Alu 220 269 -43 333 47 0 0 chr2 110474301 110474344 -140213510 + (CA)n Simple_repeat Simple_repeat 2 44 0 1693 139 0 107 chr2 110474344 110474382 -140213472 + AluJb SINE Alu 269 309 -3 300 324 27 65 chr2 110474382 110474440 -140213414 + L1ME LINE L1 5685 5733 -388 323 242 32 11 chr2 110474491 110474586 -140213268 - L2 LINE L2 -703 2611 2515 252 192 58 75 chr2 110475170 110475290 -140212564 - AluYb8 SINE Alu -67 241 152 2476 79 0 0 chr2 110475864 110476167 -140211687 - AluY SINE Alu -8 303 1 2398 78 0 16 chr2 110476239 110476545 -140211309 - AluSx SINE Alu -11 301 1 1826 187 8 4 chr2 110476822 110477300 -140210554 - L1MC3 LINE L1 0 7785 7162 2095 126 68 0 chr2 110477304 110477629 -140210225 + MER41C LTR ERV1 1 347 -207 239 211 0 14 chr2 110477630 110477701 -140210153 + (TA)n Simple_repeat Simple_repeat 2 71 0 1245 147 5 10 chr2 110477713 110477917 -140209937 + MER41C LTR ERV1 340 542 -12 1701 179 74 24 chr2 110477927 110478307 -140209547 - L1MC3 LINE L1 -632 7153 6755 265 354 51 19 chr2 110478310 110478720 -140209134 - L1 LINE L1 -2299 3847 3425 1105 204 66 2 chr2 110478737 110479136 -140208718 - L1MDb LINE L1 -4604 1802 1055 * 2020 146 16 42 chr2 110479131 110479489 -140208365 - L1PB4 LINE L1 -71 6085 5736 1955 125 10 30 chr2 110479489 110479793 -140208061 - AluSx SINE Alu -14 298 1 2020 146 16 42 chr2 110479793 110479818 -140208036 - L1PB4 LINE L1 -420 5736 5712 11982 193 28 15 chr2 110479936 110480743 -140207111 - L1PB4 LINE L1 -913 5233 4438 189 0 0 0 chr2 110480743 110480764 -140207090 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 11982 193 28 15 chr2 110480764 110482247 -140205607 - L1PB4 LINE L1 -1708 4438 2976 1950 141 7 7 chr2 110482247 110482545 -140205309 + AluSp SINE Alu 1 298 -15 11982 193 28 15 chr2 110482545 110482721 -140205133 - L1PB4 LINE L1 -3170 2976 2804 2415 95 0 0 chr2 110482721 110483026 -140204828 + AluSq SINE Alu 1 305 -8 11982 193 28 15 chr2 110483026 110483168 -140204686 - L1PB4 LINE L1 -3342 2804 2589 306 255 63 49 chr2 110484376 110484646 -140203208 + L1 LINE L1 4575 4846 -1300 * 1508 210 241 48 chr2 110484631 110484707 -140203147 + L1MC4a LINE L1 6120 6180 -1628 2290 89 7 3 chr2 110484707 110485010 -140202844 + AluSx SINE Alu 1 304 -8 1508 210 241 48 chr2 110485010 110485587 -140202267 + L1MC4a LINE L1 6180 6858 -950 1379 157 71 4 chr2 110485587 110485854 -140202000 + MLT1D LTR MaLR 1 285 -220 830 117 25 8 chr2 110486508 110486628 -140201226 + AluSp SINE Alu 1 122 -191 1838 133 0 0 chr2 110486751 110487000 -140200854 - AluSx SINE Alu -63 249 1 2245 103 13 3 chr2 110487487 110487797 -140200057 - AluSq SINE Alu 0 313 1 6549 114 15 22 chr2 110488798 110489837 -140198017 - L1MA2 LINE L1 -102 6202 5174 2094 97 0 17 chr2 110489837 110490157 -140197697 - AluSx SINE Alu 0 315 1 6549 114 15 22 chr2 110490157 110490642 -140197212 - L1MA2 LINE L1 -1130 5174 4687 877 238 35 32 chr2 110490874 110491156 -140196698 - AluSx SINE Alu -13 299 17 2290 97 3 10 chr2 110491184 110491495 -140196359 - AluSc SINE Alu 0 309 1 798 134 0 39 chr2 110491509 110491636 -140196218 - FLAM_C SINE Alu 0 143 22 1962 101 0 4 chr2 110492425 110492683 -140195171 + AluSx SINE Alu 5 261 -51 1362 184 23 0 chr2 110493065 110493340 -140194514 + MER33 DNA MER1_type 1 272 -52 2318 79 0 0 chr2 110493340 110493632 -140194222 + AluY SINE Alu 1 292 -19 1080 133 0 24 chr2 110494036 110494227 -140193627 - AluSg/x SINE Alu 0 310 127 1943 141 23 3 chr2 110494240 110494546 -140193308 - AluSx SINE Alu 0 312 1 315 213 50 62 chr2 110494781 110494861 -140192993 + L1MC4a LINE L1 6475 6553 -1255 705 206 123 23 chr2 110494926 110495185 -140192669 - L1MD3 LINE L1 -45 7950 7581 3034 163 19 33 chr2 110495193 110495900 -140191954 + L1MCb LINE L1 721 1437 -4956 2514 80 0 0 chr2 110495900 110496211 -140191643 + AluY SINE Alu 1 311 0 3034 163 19 33 chr2 110496211 110496272 -140191582 + L1MCb LINE L1 1437 1481 -4912 1927 194 40 3 chr2 110496272 110496618 -140191236 + MLT1A1 LTR MaLR 4 362 -3 3034 163 19 33 chr2 110496618 110496680 -140191174 + L1MCb LINE L1 1481 1542 -4851 2253 108 0 3 chr2 110496699 110496995 -140190859 - AluSq SINE Alu -15 298 4 790 263 0 0 chr2 110497035 110497229 -140190625 + L1M4 LINE L1 4978 5171 -975 1628 179 39 39 chr2 110497511 110497925 -140189929 + L1MC2 LINE L1 5931 6344 0 331 169 52 13 chr2 110497921 110497998 -140189856 + L1MDb LINE L1 1216 1295 -5114 * 1093 212 17 56 chr2 110497998 110498168 -140189686 + L1MDb LINE L1 2370 2545 -3861 2119 122 0 0 chr2 110498168 110498454 -140189400 + AluY SINE Alu 1 286 -25 1093 212 17 56 chr2 110498454 110498515 -140189339 + L1MDb LINE L1 2545 2607 -3799 1676 183 0 37 chr2 110498515 110498837 -140189017 + AluJo SINE Alu 1 310 -2 1093 212 17 56 chr2 110498837 110498962 -140188892 + L1MDb LINE L1 2607 2713 -3693 682 221 36 143 chr2 110498960 110499691 -140188163 + L1MC5 LINE L1 6709 7517 -525 * 2164 98 0 0 chr2 110499691 110499967 -140187887 + AluSq SINE Alu 1 276 -37 569 52 13 0 chr2 110499971 110500048 -140187806 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 682 221 36 143 chr2 110500048 110500524 -140187330 + L1MC5 LINE L1 7520 7854 -188 1916 85 57 18 chr2 110500797 110501078 -140186776 - AluY SINE Alu -19 292 1 1742 154 42 33 chr2 110501954 110502054 -140185800 - L1MB7 LINE L1 -9 6175 6077 2153 116 0 7 chr2 110502054 110502371 -140185483 - AluSg SINE Alu 0 310 1 1742 154 42 33 chr2 110502371 110502601 -140185253 - L1MB7 LINE L1 -107 6077 5842 3200 72 5 5 chr2 110502719 110503123 -140184731 - LTR66 LTR ERVL -206 404 1 1101 65 0 58 chr2 110503125 110503280 -140184574 - AluSq/x SINE Alu -167 146 1 267 31 0 0 chr2 110503404 110503436 -140184418 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 1461 189 165 5 chr2 110504295 110504671 -140183183 - MER21B LTR ERV1 -415 448 13 1765 237 103 17 chr2 110504671 110505291 -140182563 + L1MD2 LINE L1 5565 6275 -84 527 262 195 0 chr2 110505759 110505908 -140181946 + MIR SINE MIR 10 187 -75 2758 107 2 14 chr2 110506164 110506737 -140181117 - MER4A LTR ERV1 0 664 31 315 0 0 0 chr2 110508852 110508887 -140178967 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 1385 195 95 31 chr2 110509353 110509743 -140178111 - Charlie1 DNA MER1_type 0 2761 2347 2204 114 3 0 chr2 110510983 110511280 -140176574 - AluSq SINE Alu -7 306 9 359 236 27 45 chr2 110511540 110511650 -140176204 + MIR SINE MIR 37 144 -64 187 120 0 0 chr2 110511979 110512004 -140175850 + L2 LINE L2 3264 3288 -25 226 211 0 0 chr2 110513829 110513867 -140173987 - AluJ/monomer SINE Alu -261 38 1 1731 106 113 0 chr2 110514491 110514747 -140173107 + AluSg SINE Alu 20 304 -6 475 235 78 0 chr2 110514871 110514986 -140172868 - FLAM_A SINE Alu -6 136 13 2123 62 29 4 chr2 110515097 110515402 -140172452 - AluY SINE Alu 0 312 1 914 245 133 52 chr2 110515467 110515586 -140172268 - HAL1 LINE L1 -303 2204 2096 795 41 0 0 chr2 110515586 110515684 -140172170 - L1PA2 LINE L1 -3 6152 6055 914 245 133 52 chr2 110515684 110516077 -140171777 - HAL1 LINE L1 -411 2096 1623 1593 114 4 4 chr2 110516077 110516304 -140171550 - AluSg/x SINE Alu -8 304 78 914 245 133 52 chr2 110516304 110516459 -140171395 - HAL1 LINE L1 -884 1623 1482 283 190 288 27 chr2 110516483 110516667 -140171187 - HAL1 LINE L1 -1163 1344 1113 286 306 59 0 chr2 110517149 110517234 -140170620 + MIR3 SINE MIR 65 154 -54 1688 110 118 0 chr2 110517451 110517706 -140170148 + AluSc SINE Alu 4 288 -21 251 157 0 20 chr2 110517792 110517843 -140170011 - AluSc SINE Alu -5 294 245 348 200 15 10 chr2 110517866 110518003 -140169851 - L1M4 LINE L1 -1673 4473 4338 3914 169 13 6 chr2 110518003 110518700 -140169154 + MER44D DNA MER2_type 1 574 -31 2068 126 14 0 chr2 110518772 110519065 -140168789 - AluSx SINE Alu -15 297 1 1281 220 13 37 chr2 110519468 110519768 -140168086 - AluJo SINE Alu -19 293 1 378 0 0 0 chr2 110519773 110519815 -140168039 + (ATG)n Simple_repeat Simple_repeat 1 42 0 1964 95 17 58 chr2 110519820 110520114 -140167740 - AluSx SINE Alu -30 282 1 1384 191 7 30 chr2 110520831 110521134 -140166720 - AluJo SINE Alu -16 296 1 200 330 37 37 chr2 110522902 110523011 -140164843 + L3 LINE CR1 1327 1435 -142 392 203 49 55 chr2 110523311 110523419 -140164435 - L1MD3 LINE L1 -2 7993 7885 1442 127 40 4 chr2 110523419 110523647 -140164207 + MER46A DNA MER2_type 1 236 0 392 203 49 55 chr2 110523647 110523701 -140164153 - L1MD3 LINE L1 -110 7885 7832 * 553 216 92 27 chr2 110523700 110523885 -140163969 - L1MD2 LINE L1 -214 6145 5949 400 163 131 20 chr2 110523954 110524107 -140163747 - AluSg/x SINE Alu -28 282 113 269 148 185 25 chr2 110524268 110524349 -140163505 - L1MD2 LINE L1 -390 5852 5759 990 173 0 12 chr2 110524349 110524522 -140163332 - AluSg/x SINE Alu -5 307 137 391 182 57 0 chr2 110524523 110524611 -140163243 - L1MD2 LINE L1 -589 5770 5678 196 312 180 45 chr2 110525278 110525951 -140161903 - L2 LINE L2 -1824 1490 727 615 188 0 26 chr2 110525955 110526072 -140161782 + AluJo SINE Alu 86 199 -113 328 301 257 12 chr2 110526073 110526392 -140161462 - L2 LINE L2 -2831 483 87 21 0 0 0 chr2 110527654 110527675 -140160179 + AT_rich Low_complexity Low_complexity 1 21 0 580 253 84 5 chr2 110527922 110528124 -140159730 + MER58A DNA MER1_type 1 218 -6 687 160 25 0 chr2 110528394 110528513 -140159341 + AluSc SINE Alu 176 297 -12 308 269 139 67 chr2 110528888 110528959 -140158895 - L1MC5 LINE L1 -373 7588 7524 2110 106 30 3 chr2 110528959 110529260 -140158594 - AluSc SINE Alu 0 309 1 308 269 139 67 chr2 110529260 110529504 -140158350 - L1MC5 LINE L1 -437 7524 7250 540 209 243 0 chr2 110529608 110529756 -140158098 - MER5A DNA MER1_type -1 188 5 303 154 77 0 chr2 110529759 110529824 -140158030 - L1MC5 LINE L1 -623 7338 7269 2365 87 3 3 chr2 110530632 110530942 -140156912 + AluSq SINE Alu 1 310 -3 386 250 31 35 chr2 110531055 110531295 -140156559 + L1MEd LINE L1 1123 1398 -4866 388 256 31 44 chr2 110531755 110531852 -140156002 - MER112 DNA MER1_type -6 254 158 1409 185 12 66 chr2 110531852 110532171 -140155683 + AluJo SINE Alu 1 302 -10 388 256 31 44 chr2 110532171 110532233 -140155621 - MER112 DNA MER1_type -102 158 97 1128 206 137 44 chr2 110533392 110533869 -140153985 + MLT1E LTR MaLR 1 577 -16 257 176 0 0 chr2 110534047 110534098 -140153756 + L1ME1 LINE L1 5645 5695 -547 * 491 127 0 15 chr2 110534090 110534192 -140153662 + L1MB7 LINE L1 6079 6177 -1 * 1488 235 92 2 chr2 110534187 110534633 -140153221 + L1ME1 LINE L1 5676 6161 -5 1123 207 25 41 chr2 110534709 110534888 -140152966 - Charlie1b DNA MER1_type -2440 321 148 2076 110 7 10 chr2 110534888 110535188 -140152666 + AluSc SINE Alu 1 299 -10 1123 207 25 41 chr2 110535188 110535322 -140152532 - Charlie1b DNA MER1_type -2613 148 13 2151 120 0 13 chr2 110535469 110535769 -140152085 + AluSg SINE Alu 1 296 -14 2236 105 0 3 chr2 110536971 110537275 -140150579 - AluSc SINE Alu 0 309 7 2475 68 0 13 chr2 110537288 110537599 -140150255 - AluY SINE Alu -4 307 1 189 0 0 0 chr2 110537599 110537620 -140150234 + (T)n Simple_repeat Simple_repeat 1 21 0 2226 88 7 3 chr2 110537785 110538080 -140149774 - AluSp SINE Alu -17 296 1 1821 124 0 8 chr2 110538091 110538349 -140149505 - AluSc SINE Alu -15 294 39 2464 77 0 3 chr2 110538518 110538830 -140149024 - AluY SINE Alu 0 311 1 435 182 39 0 chr2 110538884 110538961 -140148893 - AluJo/FRAM SINE Alu -35 277 198 279 159 0 0 chr2 110538962 110539006 -140148848 - AluSc SINE Alu -255 44 1 1719 149 7 31 chr2 110539032 110539321 -140148533 - AluJo SINE Alu -30 282 1 385 298 42 48 chr2 110539742 110539864 -140147990 + L3 LINE CR1 374 496 -1081 2180 112 3 10 chr2 110539864 110540168 -140147686 + AluSx SINE Alu 1 302 -10 385 298 42 48 chr2 110540168 110540213 -140147641 + L3 LINE CR1 496 540 -1037 546 237 134 69 chr2 110540686 110541036 -140146818 - L1MC4a LINE L1 -1916 5892 5520 364 353 155 22 chr2 110541079 110541479 -140146375 - L3 LINE CR1 -78 1499 1047 2015 133 19 26 chr2 110541641 110541949 -140145905 - AluJb SINE Alu -6 306 1 2013 114 0 36 chr2 110541953 110542261 -140145593 - AluSx SINE Alu -12 300 4 187 339 136 0 chr2 110542835 110542953 -140144901 - L2 LINE L2 -2 3270 3137 188 308 20 144 chr2 110543521 110543585 -140144269 + MER5B DNA MER1_type 2 72 -106 1751 161 36 9 chr2 110543585 110543920 -140143934 - L1MB8 LINE L1 -15 6163 5820 188 308 20 144 chr2 110543920 110543994 -140143860 + MER5B DNA MER1_type 72 112 -66 2154 76 9 44 chr2 110543994 110544310 -140143544 - AluY SINE Alu -6 305 1 188 308 20 144 chr2 110544310 110544365 -140143489 + MER5B DNA MER1_type 112 172 -6 237 220 34 0 chr2 110544965 110545024 -140142830 - L1ME4a LINE L1 -83 6038 5978 2158 98 3 3 chr2 110545080 110545390 -140142464 - AluSq SINE Alu 0 313 1 1508 176 4 8 chr2 110545398 110545660 -140142194 - AluJo SINE Alu -26 286 26 2160 97 14 0 chr2 110545660 110545949 -140141905 + AluSx SINE Alu 1 293 -19 227 216 0 0 chr2 110545949 110545986 -140141868 - AluJo SINE Alu -271 37 1 503 285 86 4 chr2 110546072 110546339 -140141515 - L1ME4a LINE L1 -294 5827 5539 1393 109 84 5 chr2 110546351 110546582 -140141272 - AluSg/x SINE Alu 0 316 70 202 164 73 73 chr2 110547902 110547957 -140139897 + MIR SINE MIR 187 241 -21 1518 100 0 92 chr2 110548253 110548504 -140139350 + AluY SINE Alu 1 228 -83 971 158 18 12 chr2 110549277 110549448 -140138406 - AluSg/x SINE Alu -7 305 134 301 241 0 0 chr2 110550367 110550450 -140137404 + A-rich Low_complexity Low_complexity 1 83 0 370 316 66 15 chr2 110551293 110551429 -140136425 + MIR3 SINE MIR 9 151 -57 2112 117 7 3 chr2 110552661 110552961 -140134893 + AluSx SINE Alu 3 303 -9 24 53 0 0 chr2 110553013 110553051 -140134803 + AT_rich Low_complexity Low_complexity 1 38 0 596 290 42 23 chr2 110553835 110554049 -140133805 - MIR SINE MIR -21 241 24 235 333 29 26 chr2 110554552 110554724 -140133130 - MIR SINE MIR -58 150 24 344 259 121 60 chr2 110554855 110555087 -140132767 - L1ME4a LINE L1 -103 6018 5773 24 53 0 0 chr2 110555563 110555601 -140132253 + AT_rich Low_complexity Low_complexity 1 38 0 925 206 31 55 chr2 110555898 110556155 -140131699 + MIR SINE MIR 2 252 -10 198 143 0 0 chr2 110556155 110556190 -140131664 + (CAT)n Simple_repeat Simple_repeat 2 36 0 1993 148 0 16 chr2 110558867 110559184 -140128670 + AluSx SINE Alu 1 312 0 343 283 117 14 chr2 110560302 110560447 -140127407 - MIR3 SINE MIR -8 200 41 826 186 0 8 chr2 110560612 110560741 -140127113 + FRAM SINE Alu 5 132 -44 183 42 0 0 chr2 110560764 110560788 -140127066 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 249 105 0 0 chr2 110560788 110560826 -140127028 - Charlie5 DNA MER1_type -77 2535 2498 720 69 0 0 chr2 110561608 110561695 -140126159 - AluY SINE Alu -223 87 1 232 275 0 50 chr2 110562270 110562350 -140125504 + MIR SINE MIR 55 130 -78 1709 179 3 3 chr2 110562402 110562692 -140125162 + AluSx SINE Alu 1 290 -22 2119 115 3 3 chr2 110563116 110563420 -140124434 - AluSg1 SINE Alu -5 304 1 2812 73 129 8 chr2 110563920 110563953 -140123901 - MLT2A1 LTR ERVL 0 444 416 269 26 0 26 chr2 110563953 110563992 -140123862 + (TGGA)n Simple_repeat Simple_repeat 1 38 0 2812 73 129 8 chr2 110563992 110564354 -140123500 - MLT2A1 LTR ERVL -28 416 1 21 57 0 0 chr2 110564366 110564401 -140123453 + AT_rich Low_complexity Low_complexity 1 35 0 1083 50 14 7 chr2 110564730 110564871 -140122983 - MLT2A1 LTR ERVL -302 142 1 21 57 0 0 chr2 110564883 110564918 -140122936 + AT_rich Low_complexity Low_complexity 1 35 0 264 235 61 70 chr2 110565300 110565415 -140122439 + MIR SINE MIR 69 182 -80 2330 78 10 3 chr2 110566081 110566376 -140121478 - AluY SINE Alu -14 297 1 2188 110 7 3 chr2 110567135 110567435 -140120419 - AluSc SINE Alu -8 301 1 1856 155 34 3 chr2 110569324 110569620 -140118234 - AluJo SINE Alu -7 305 1 235 246 0 0 chr2 110570206 110570263 -140117591 + T-rich Low_complexity Low_complexity 1 57 0 229 320 68 48 chr2 110570796 110570899 -140116955 - MIR SINE MIR -84 124 20 1562 150 16 28 chr2 110572013 110572267 -140115587 - AluJb SINE Alu -2 310 60 2319 100 3 0 chr2 110572647 110572956 -140114898 - AluSp SINE Alu -3 310 1 690 186 241 86 chr2 110573821 110574022 -140113832 + Charlie2a DNA MER1_type 187 356 -2506 1766 171 67 6 chr2 110574022 110574350 -140113504 - MER7A DNA MER2_type 0 346 1 690 186 241 86 chr2 110574350 110574407 -140113447 + Charlie2a DNA MER1_type 356 403 -2459 2285 114 3 0 chr2 110574407 110574715 -140113139 - AluSg SINE Alu -1 309 1 690 186 241 86 chr2 110574715 110574837 -140113017 + Charlie2a DNA MER1_type 403 627 -2235 1688 182 95 17 chr2 110574847 110575205 -140112649 - MER21B LTR ERV1 -4 859 474 933 209 0 0 chr2 110575215 110575378 -140112476 - AluJb SINE Alu -14 298 136 1811 169 14 3 chr2 110575406 110575702 -140112152 + AluJo SINE Alu 1 299 -13 2738 177 36 11 chr2 110575720 110576188 -140111666 - MER21B LTR ERV1 -383 480 1 439 238 48 0 chr2 110576249 110576354 -140111500 - MIR SINE MIR -141 121 12 517 184 48 44 chr2 110576374 110576578 -140111276 + Charlie2a DNA MER1_type 933 1137 -1725 1126 126 4 118 chr2 110576578 110576816 -140111038 + MER2 DNA MER2_type 1 211 -134 267 311 0 0 chr2 110576865 110576939 -140110915 + MER2 DNA MER2_type 268 341 -4 4437 118 27 29 chr2 110576958 110577656 -140110198 - L1MA6 LINE L1 0 6300 5604 539 243 128 24 chr2 110577656 110577836 -140110018 + Charlie2a DNA MER1_type 1150 1310 -1552 710 218 16 0 chr2 110577836 110577960 -140109894 + FLAM_A SINE Alu 2 127 -6 539 243 128 24 chr2 110577960 110578007 -140109847 + Charlie2a DNA MER1_type 1310 1351 -1511 2087 118 14 3 chr2 110578007 110578296 -140109558 + AluSx SINE Alu 1 292 -20 539 243 128 24 chr2 110578296 110578422 -140109432 + Charlie2a DNA MER1_type 1351 1645 -1217 * 1293 212 107 72 chr2 110578415 110579080 -140108774 + Charlie2a DNA MER1_type 1945 2719 -143 697 220 8 8 chr2 110579080 110579212 -140108642 + FLAM_C SINE Alu 1 132 -1 1293 212 107 72 chr2 110579212 110579298 -140108556 + Charlie2a DNA MER1_type 2719 2801 -61 2053 111 11 0 chr2 110579766 110580045 -140107809 + AluSq SINE Alu 1 282 -31 2193 78 50 0 chr2 110580780 110581063 -140106791 + AluSp SINE Alu 1 297 -16 391 247 112 84 chr2 110582005 110582256 -140105598 - L1MC4 LINE L1 0 8042 7785 1851 150 17 7 chr2 110582262 110582555 -140105299 - AluJo SINE Alu -16 296 1 2421 53 0 17 chr2 110582912 110583214 -140104640 + AluY SINE Alu 1 297 -14 2450 75 7 0 chr2 110583305 110583612 -140104242 + AluY SINE Alu 1 309 -2 1891 164 97 30 chr2 110584007 110584378 -140103476 - MSTD LTR MaLR 0 396 1 1056 257 143 66 chr2 110585715 110586693 -140101161 - L1MC4 LINE L1 0 8042 6954 1154 161 181 74 chr2 110587919 110588108 -140099746 - MER2 DNA MER2_type -1 343 176 2215 110 3 3 chr2 110588108 110588408 -140099446 + AluSq SINE Alu 1 300 -13 1154 161 181 74 chr2 110588408 110588528 -140099326 - MER2 DNA MER2_type -168 176 1 1678 157 41 17 chr2 110588545 110588838 -140099016 + AluJo SINE Alu 1 300 -12 1774 148 3 65 chr2 110588859 110589005 -140098849 + AluJb SINE Alu 1 120 -192 2421 84 7 0 chr2 110589005 110589302 -140098552 + AluSc SINE Alu 1 299 -10 1774 148 3 65 chr2 110589302 110589465 -140098389 + AluJb SINE Alu 120 291 -21 2092 72 11 18 chr2 110590139 110590417 -140097437 + AluY SINE Alu 24 299 -12 2291 116 0 13 chr2 110591093 110591404 -140096450 + AluSx SINE Alu 1 307 -5 1098 94 54 179 chr2 110591773 110592070 -140095784 + AluJo SINE Alu 44 303 -9 2375 93 3 0 chr2 110592565 110592865 -140094989 + AluSp SINE Alu 1 301 -12 2514 129 17 101 chr2 110592886 110593360 -140094494 + MER1A DNA MER1_type 94 527 -2 2005 152 3 3 chr2 110593400 110593710 -140094144 + AluJo SINE Alu 1 310 -2 2097 128 0 0 chr2 110593759 110594067 -140093787 + AluSx SINE Alu 1 308 0 342 115 0 0 chr2 110594067 110594119 -140093735 + (TA)n Simple_repeat Simple_repeat 2 53 0 225 258 32 32 chr2 110594408 110594470 -140093384 + L2 LINE L2 3208 3269 -3 406 190 90 0 chr2 110594789 110594889 -140092965 + L1 LINE L1 5162 5270 -876 970 89 8 0 chr2 110594893 110595017 -140092837 + AluSg SINE Alu 5 129 -181 6548 121 0 0 chr2 110595493 110596438 -140091416 - L1P LINE L1 -2038 4108 3164 1623 204 7 0 chr2 110596532 110596839 -140091015 - AluJo SINE Alu 0 309 1 821 121 65 0 chr2 110596888 110597012 -140090842 - AluSg/x SINE Alu -17 295 164 587 169 11 201 chr2 110597063 110597336 -140090518 + MER45C DNA AcHobo 710 930 -23 353 211 73 113 chr2 110597384 110597588 -140090266 + LTR33 LTR ERVL 326 521 0 963 147 70 0 chr2 110597682 110597839 -140090015 - MER82 DNA MER2_type -485 168 1 329 316 34 28 chr2 110598023 110598200 -140089654 - MER5B DNA MER1_type 0 178 1 3182 226 68 70 chr2 110598630 110599008 -140088846 - L1MC5 LINE L1 -42 7919 7542 1876 143 0 11 chr2 110599008 110599287 -140088567 + AluJo SINE Alu 13 288 -24 3182 226 68 70 chr2 110599287 110600148 -140087706 - L1MC5 LINE L1 -419 7542 6683 609 279 92 4 chr2 110600188 110600428 -140087426 - L1MC5 LINE L1 -1802 6006 5746 905 269 106 41 chr2 110600456 110600970 -140086884 - L2 LINE L2 -6 3307 2766 415 241 23 92 chr2 110601151 110601296 -140086558 + MIR SINE MIR 21 154 -108 2190 164 49 3 chr2 110601296 110601663 -140086191 + MLT1B LTR MaLR 3 386 -4 415 241 23 92 chr2 110601663 110601691 -140086163 + MIR SINE MIR 154 182 -80 992 135 0 0 chr2 110601963 110602119 -140085735 + AluY SINE Alu 156 311 0 13914 172 40 12 chr2 110603127 110604942 -140082912 + L1PB2 LINE L1 1 1765 -5102 2151 93 4 0 chr2 110604942 110605211 -140082643 + AluY SINE Alu 1 270 -41 242 71 0 24 chr2 110605215 110605257 -140082597 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 13914 172 40 12 chr2 110605257 110608955 -140078899 + L1PB2 LINE L1 1767 5726 -1141 1938 139 36 3 chr2 110608955 110609256 -140078598 + AluSx SINE Alu 1 311 -1 13914 172 40 12 chr2 110609256 110610421 -140077433 + L1PB2 LINE L1 5726 6858 -9 230 304 61 96 chr2 110610508 110610738 -140077116 - L2 LINE L2 -32 3240 3019 251 54 27 0 chr2 110610874 110610911 -140076943 - MLT1E2 LTR MaLR 0 624 587 631 256 59 40 chr2 110610911 110611312 -140076542 - MLT1E2 LTR MaLR -106 399 3 815 230 64 4 chr2 110611358 110611593 -140076261 - AluJo SINE Alu -8 304 56 1554 170 126 64 chr2 110611595 110612047 -140075807 - LTR12 LTR ERV1 -234 480 1 363 123 18 0 chr2 110612047 110612104 -140075750 - AluJo SINE Alu -244 58 1 366 260 0 19 chr2 110612302 110612406 -140075448 + Charlie8 DNA MER1_type 72 173 -2244 206 298 155 54 chr2 110612586 110612754 -140075100 - MIR SINE MIR -62 200 16 970 184 0 0 chr2 110614104 110614267 -140073587 + FRAM SINE Alu 4 166 0 372 249 71 47 chr2 110614772 110614941 -140072913 - MER5B DNA MER1_type -1 177 5 815 217 75 75 chr2 110615294 110615681 -140072173 + MLT1H LTR MaLR 9 395 -154 430 326 27 5 chr2 110615746 110615930 -140071924 - Charlie8 DNA MER1_type -2226 191 4 1410 165 11 37 chr2 110616520 110616793 -140071061 + Tigger7 DNA MER2_type 1 266 -284 558 182 0 0 chr2 110616791 110616890 -140070964 + Tigger7 DNA MER2_type 2393 2491 0 * 2495 80 0 0 chr2 110617075 110617386 -140070468 - AluY SINE Alu 0 311 1 1825 168 27 0 chr2 110617801 110618099 -140069755 + AluJb SINE Alu 5 310 -2 260 241 19 0 chr2 110618140 110618194 -140069660 - MER5B DNA MER1_type 0 178 124 38341 75 6 6 chr2 110618214 110624345 -140063509 + L1PA6 LINE L1 11 6143 -11 443 256 16 47 chr2 110624347 110624476 -140063378 - MER5B DNA MER1_type -51 127 3 2237 128 0 0 chr2 110625534 110625839 -140062015 + AluSx SINE Alu 1 305 -7 440 322 3 0 chr2 110626033 110626214 -140061640 - L1MA10 LINE L1 -2 6164 5989 2396 111 0 0 chr2 110626232 110626538 -140061316 - AluSx SINE Alu -6 306 1 1314 204 32 127 chr2 110626540 110627099 -140060755 - L1MC4 LINE L1 -2044 5998 5493 218 222 0 12 chr2 110627200 110627218 -140060636 + (TA)n Simple_repeat Simple_repeat 1 18 -62 6787 124 86 0 chr2 110627218 110628352 -140059502 - Tigger3b DNA MER2_type 0 1231 1 218 222 0 12 chr2 110628352 110628414 -140059440 + (TA)n Simple_repeat Simple_repeat 18 80 0 938 160 65 6 chr2 110628951 110629120 -140058734 - AluJo SINE Alu -14 298 120 332 274 38 0 chr2 110629593 110629699 -140058155 - MIR SINE MIR -1 261 152 727 303 49 16 chr2 110630553 110630797 -140057057 - MIR SINE MIR -2 260 9 423 237 21 10 chr2 110630880 110630977 -140056877 + MER58B DNA MER1_type 1 98 -243 * 1934 143 53 18 chr2 110630968 110631310 -140056544 + MLT1A1 LTR MaLR 12 365 0 1074 225 42 21 chr2 110631310 110631565 -140056289 + MER58B DNA MER1_type 80 340 -1 288 238 197 0 chr2 110631667 110631814 -140056040 - MLT1G3 LTR MaLR -196 334 159 403 277 93 56 chr2 110633481 110633847 -140054007 + L1ME LINE L1 5097 5477 -743 3000 117 7 2 chr2 110633852 110634298 -140053556 - L1PA16 LINE L1 0 6166 5719 483 306 47 36 chr2 110634299 110634577 -140053277 + L1ME LINE L1 5513 5793 -328 6616 110 46 12 chr2 110634989 110635963 -140051891 + LTR13 LTR ERVK 1 1007 0 685 227 124 18 chr2 110636280 110636505 -140051349 + MIR SINE MIR 14 262 0 4571 61 41 3 chr2 110637684 110638270 -140049584 - LTR14B LTR ERVK 0 608 1 405 338 28 0 chr2 110638847 110638989 -140048865 + MIR3 SINE MIR 60 205 -3 189 0 0 0 chr2 110639348 110639369 -140048485 + (TG)n Simple_repeat Simple_repeat 2 22 0 1801 186 6 10 chr2 110641975 110642286 -140045568 - AluJb SINE Alu 0 312 3 26 0 0 0 chr2 110642542 110642568 -140045286 + AT_rich Low_complexity Low_complexity 1 26 0 1173 170 9 19 chr2 110642568 110642780 -140045074 - MER2 DNA MER2_type -135 210 1 2132 259 50 22 chr2 110642855 110643549 -140044305 + MER21B LTR ERV1 1 714 -149 1637 68 10 5 chr2 110644277 110644482 -140043372 - AluY SINE Alu -1 310 105 534 167 101 29 chr2 110644994 110645132 -140042722 + MLT1E LTR MaLR 1 148 -445 346 221 193 67 chr2 110645213 110645467 -140042387 + MLT1E LTR MaLR 177 462 -105 435 297 140 33 chr2 110645561 110646019 -140041835 + L2 LINE L2 2807 3313 0 245 181 83 0 chr2 110647183 110647255 -140040599 + MIR3 SINE MIR 82 159 -49 272 317 49 24 chr2 110647517 110647640 -140040214 - MLT1K LTR MaLR -442 146 21 1732 135 95 4 chr2 110648949 110649223 -140038631 + AluSx SINE Alu 1 299 -13 2209 128 3 0 chr2 110650530 110650836 -140037018 - AluSq SINE Alu -6 307 1 2199 116 0 3 chr2 110650841 110651142 -140036712 - AluSx SINE Alu -12 300 1 371 237 69 8 chr2 110651366 110651497 -140036357 - MLT1J1 LTR MaLR -236 210 72 237 65 0 0 chr2 110651505 110651536 -140036318 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3515 219 37 7 chr2 110653718 110654588 -140033266 - L1MB8 LINE L1 -1 6177 5335 213 39 0 0 chr2 110654588 110654614 -140033240 + (TA)n Simple_repeat Simple_repeat 2 27 0 2432 87 0 3 chr2 110654614 110654914 -140032940 - AluSc SINE Alu -10 299 1 3515 219 37 7 chr2 110654914 110655325 -140032529 - L1MB8 LINE L1 -842 5336 4858 3104 162 17 12 chr2 110655326 110655901 -140031953 - ERVL LTR ERVL -374 5390 4813 320 134 60 0 chr2 110655896 110655963 -140031891 - ERVL LTR ERVL -1239 4525 4455 * 1486 118 9 0 chr2 110656092 110656312 -140031542 - ERVL LTR ERVL -1450 4204 3983 4116 246 56 3 chr2 110656318 110657401 -140030453 - ERVL LTR ERVL -3444 2320 1180 389 167 10 0 chr2 110657407 110657509 -140030345 + (CAAG)n Simple_repeat Simple_repeat 2 104 0 838 238 0 0 chr2 110657510 110657697 -140030157 - ERVL LTR ERVL -4575 1189 1002 297 0 0 0 chr2 110657697 110657730 -140030124 + (TG)n Simple_repeat Simple_repeat 2 34 0 5090 163 23 29 chr2 110657742 110658665 -140029189 - MER49 LTR ERV1 -2 921 5 370 255 29 0 chr2 110658814 110658916 -140028938 - MLT2C1 LTR ERVL -291 106 2 261 321 84 38 chr2 110659229 110659360 -140028494 - MIR SINE MIR -78 184 48 264 352 28 14 chr2 110660141 110660286 -140027568 + MIR SINE MIR 3 149 -113 1138 190 62 4 chr2 110660581 110660823 -140027031 + MLT1D LTR MaLR 250 505 0 202 292 101 0 chr2 110662253 110662342 -140025512 - L2 LINE L2 -215 3057 2960 432 226 89 16 chr2 110662913 110663037 -140024817 + MIR3 SINE MIR 35 167 -41 2388 112 0 0 chr2 110663811 110664123 -140023731 + AluSq SINE Alu 1 312 -1 828 272 18 21 chr2 110665034 110665313 -140022541 - MER34C LTR ERV1 -149 436 159 180 0 0 0 chr2 110665362 110665382 -140022472 + (T)n Simple_repeat Simple_repeat 1 20 0 370 163 12 12 chr2 110666613 110666693 -140021161 - MER31-int LTR ERV1 -4558 378 299 290 287 28 19 chr2 110667042 110667150 -140020704 - MER31-int LTR ERV1 -7208 329 221 394 103 0 0 chr2 110667414 110667482 -140020372 - LTR54 LTR ERV1 -2 508 441 743 265 32 23 chr2 110667482 110667701 -140020153 - MER57A-int LTR ERV1 -7312 225 5 570 234 56 112 chr2 110667706 110668133 -140019721 - MER57A LTR ERV1 0 403 1 285 309 0 0 chr2 110668160 110668257 -140019597 + (TA)n Simple_repeat Simple_repeat 2 98 0 405 287 18 0 chr2 110668305 110668472 -140019382 + (TA)n Simple_repeat Simple_repeat 1 170 0 241 172 16 31 chr2 110668529 110668593 -140019261 + (TA)n Simple_repeat Simple_repeat 1 63 0 350 191 209 0 chr2 110668626 110668722 -140019132 - L1MB5 LINE L1 -1 6173 6052 1645 161 4 22 chr2 110668722 110668996 -140018858 - AluJb SINE Alu -15 297 29 13180 194 18 35 chr2 110668996 110669635 -140018219 - L1P LINE L1 -1110 5036 4387 405 0 0 0 chr2 110669635 110669680 -140018174 + (TG)n Simple_repeat Simple_repeat 2 46 0 13180 194 18 35 chr2 110669680 110671899 -140015955 - L1P LINE L1 -1759 4387 2131 198 0 0 0 chr2 110671899 110671921 -140015933 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1587 213 7 0 chr2 110671925 110672207 -140015647 - AluJb SINE Alu -24 288 5 13180 194 18 35 chr2 110672207 110672434 -140015420 - L1P LINE L1 -4018 2128 2001 1993 167 3 0 chr2 110672434 110672745 -140015109 - AluJb SINE Alu 0 312 1 13180 194 18 35 chr2 110672745 110672884 -140014970 - L1P LINE L1 -4145 2001 1861 7893 230 31 28 chr2 110677935 110680323 -140007531 - L1 LINE L1 -1185 4961 2568 594 269 90 57 chr2 110680544 110680577 -140007277 - MER4B-int LTR ERV1 -1678 3258 3228 1735 188 3 10 chr2 110680577 110680875 -140006979 - AluJo SINE Alu -10 302 7 594 269 90 57 chr2 110680875 110681632 -140006222 - MER4B-int LTR ERV1 -1708 3228 2482 478 179 0 82 chr2 110681653 110681670 -140006184 - MER4B-int LTR ERV1 -2746 3852 3835 2391 156 38 19 chr2 110681670 110682088 -140005766 + MSTB LTR MaLR 1 426 0 478 179 0 82 chr2 110682088 110682204 -140005650 - MER4B-int LTR ERV1 -2763 3835 3730 364 243 72 40 chr2 110682303 110682455 -140005399 - MER4B-int LTR ERV1 -2339 4337 4181 625 153 148 85 chr2 110682546 110682782 -140005072 - MER4B-int LTR ERV1 -4282 2476 2226 14630 23 2 1 chr2 110682783 110685243 -140002611 + L1PA3 LINE L1 3695 6155 0 863 271 98 19 chr2 110685310 110685874 -140001980 + L1M4 LINE L1 4389 4996 -1150 1858 211 2 37 chr2 110686008 110686411 -140001443 + MLT1B LTR MaLR 2 390 0 972 260 21 13 chr2 110686779 110687014 -140000840 + MIR SINE MIR 6 242 -20 638 223 32 27 chr2 110688936 110689124 -139998730 - MER53 DNA DNA 0 189 1 385 130 2 103 chr2 110691457 110691946 -139995908 + (AGCTG)n Simple_repeat Simple_repeat 1 439 0 221 204 68 0 chr2 110699571 110699659 -139988195 + (CAAT)n Simple_repeat Simple_repeat 3 96 0 206 224 20 0 chr2 110700715 110700764 -139987090 + C-rich Low_complexity Low_complexity 1 50 0 221 219 0 0 chr2 110702388 110702429 -139985425 + C-rich Low_complexity Low_complexity 2 42 0 3204 161 46 25 chr2 110703068 110703703 -139984151 + LTR39 LTR ERV1 1 648 -135 330 39 0 0 chr2 110703705 110703756 -139984098 - AluSp/q SINE Alu 0 303 253 1521 167 29 0 chr2 110704181 110704426 -139983428 - AluJo SINE Alu -15 297 46 257 258 15 0 chr2 110706883 110706949 -139980905 - MIR SINE MIR -81 127 61 186 296 0 62 chr2 110707095 110707176 -139980678 - L3b LINE CR1 -345 1238 1163 294 226 24 48 chr2 110709527 110709611 -139978243 - MIR SINE MIR -102 160 79 3250 258 71 25 chr2 110709612 110710962 -139976892 + L1M4 LINE L1 2735 4223 -1923 2256 120 6 16 chr2 110710962 110711278 -139976576 + AluSp SINE Alu 1 313 0 3250 258 71 25 chr2 110711278 110711534 -139976320 + L1M4 LINE L1 4223 4466 -1680 227 293 94 28 chr2 110714073 110714179 -139973675 - MIR3 SINE MIR -10 198 86 452 250 50 29 chr2 110714443 110714583 -139973271 + MIR SINE MIR 23 165 -97 423 0 0 0 chr2 110714618 110714665 -139973189 + (CA)n Simple_repeat Simple_repeat 2 48 0 221 345 68 7 chr2 110715486 110715634 -139972220 + MIR SINE MIR 36 192 -70 454 245 65 54 chr2 110716401 110716585 -139971269 + L2 LINE L2 3109 3294 -19 281 266 38 0 chr2 110716826 110716905 -139970949 - MIR3 SINE MIR -49 159 78 207 0 0 0 chr2 110717766 110717789 -139970065 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 623 190 11 11 chr2 110717883 110718062 -139969792 + (ATG)n Simple_repeat Simple_repeat 1 179 0 1843 163 58 3 chr2 110718072 110718397 -139969457 - MER61A LTR ERV1 0 343 1 243 253 11 46 chr2 110718620 110718707 -139969147 + MER5B DNA MER1_type 5 88 -90 189 0 0 0 chr2 110718880 110718901 -139968953 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1640 214 60 8 chr2 110719339 110719736 -139968118 - MER63C DNA MER1_type -512 418 1 234 341 22 0 chr2 110720162 110720253 -139967601 + LTR23 LTR ERV1 332 424 -13 3653 58 41 0 chr2 110720313 110720798 -139967056 + LTR10D LTR ERV1 9 513 0 216 0 0 0 chr2 110720903 110720927 -139966927 + (A)n Simple_repeat Simple_repeat 1 24 0 2064 149 29 49 chr2 110720997 110721287 -139966567 - LTR56 LTR ERV1 -2 443 164 6193 128 17 21 chr2 110721287 110722246 -139965608 + LTR5 LTR ERVK 1 955 -14 2064 149 29 49 chr2 110722246 110722405 -139965449 - LTR56 LTR ERV1 -281 164 3 2363 138 0 0 chr2 110722577 110722925 -139964929 - LTR17 LTR ERV1 -49 731 384 * 3176 123 18 8 chr2 110722907 110723413 -139964441 - LTR17 LTR ERV1 -269 511 1 1718 220 128 73 chr2 110724437 110725124 -139962730 - MER50 LTR ERV1 0 734 10 2264 123 0 0 chr2 110726039 110726347 -139961507 - AluSx SINE Alu -4 308 1 375 135 0 54 chr2 110728151 110728225 -139959629 + FAM SINE Alu 110 172 -3 3582 191 27 74 chr2 110728229 110728416 -139959438 - L1MD1 LINE L1 -165 6077 5883 2046 106 0 84 chr2 110728416 110728586 -139959268 - AluSg SINE Alu -15 295 112 219 43 21 43 chr2 110728586 110728633 -139959221 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 9911 59 80 2 chr2 110728633 110729883 -139957971 - SVA Other Other -23 1363 17 2046 106 0 84 chr2 110729883 110730033 -139957821 - AluSg SINE Alu -196 114 1 3582 191 27 74 chr2 110730033 110730929 -139956925 - L1MD1 LINE L1 -359 5883 4947 2587 66 0 0 chr2 110730929 110731231 -139956623 - AluY SINE Alu -9 302 1 3582 191 27 74 chr2 110731231 110731268 -139956586 - L1MD1 LINE L1 -1295 4947 4910 1758 135 81 35 chr2 110731268 110731616 -139956238 + THE1B LTR MaLR 1 364 0 3582 191 27 74 chr2 110731616 110732159 -139955695 - L1MD1 LINE L1 -1332 4910 4333 1765 191 7 3 chr2 110732196 110732495 -139955359 - AluJo SINE Alu -12 300 1 22 0 0 0 chr2 110733213 110733235 -139954619 + AT_rich Low_complexity Low_complexity 1 22 0 333 0 0 0 chr2 110733794 110733831 -139954023 + (T)n Simple_repeat Simple_repeat 1 37 0 211 352 74 0 chr2 110734941 110735049 -139952805 + L2 LINE L2 3136 3251 -21 1622 174 34 0 chr2 110736313 110736607 -139951247 + AluJo SINE Alu 5 308 -4 13077 29 2 5 chr2 110737471 110739127 -139948727 - L1PA3 LINE L1 -2022 4124 2473 10378 26 1 0 chr2 110739127 110741155 -139946699 + L1PA3 LINE L1 4124 6152 -3 1512 209 46 35 chr2 110741373 110741741 -139946113 - MLT1A2 LTR MaLR -1 373 2 2771 223 27 58 chr2 110742232 110742566 -139945288 - MER21B LTR ERV1 -60 803 460 391 219 10 0 chr2 110742566 110742662 -139945192 + L1PB2 LINE L1 6053 6149 -2 2771 223 27 58 chr2 110742662 110743103 -139944751 - MER21B LTR ERV1 -403 460 52 1560 192 85 22 chr2 110743407 110743621 -139944233 + LTR56 LTR ERV1 9 208 -237 2202 112 13 3 chr2 110743621 110743926 -139943928 - AluSx SINE Alu -4 308 1 1560 192 85 22 chr2 110743926 110744122 -139943732 + LTR56 LTR ERV1 208 445 0 324 0 0 0 chr2 110744678 110744714 -139943140 + (CACAG)n Simple_repeat Simple_repeat 3 38 0 454 296 283 25 chr2 110745522 110745883 -139941971 + LTR16A LTR ERVL 1 454 -3 7975 64 9 10 chr2 110747403 110748475 -139939379 + MER11C LTR ERVK 1 1071 0 246 209 30 0 chr2 110748805 110748872 -139938982 + MLT1K LTR MaLR 516 584 -4 207 0 0 0 chr2 110749210 110749233 -139938621 + (A)n Simple_repeat Simple_repeat 1 23 0 206 214 0 0 chr2 110750016 110750058 -139937796 + G-rich Low_complexity Low_complexity 5 46 0 2540 64 0 3 chr2 110750198 110750510 -139937344 + AluY SINE Alu 1 311 0 432 293 55 33 chr2 110751903 110752084 -139935770 - L2 LINE L2 -2 3311 3127 198 333 48 32 chr2 110752486 110752612 -139935242 - L2 LINE L2 -563 2751 2624 1982 121 84 31 chr2 110753055 110753411 -139934443 + THE1C LTR MaLR 1 375 0 9058 145 17 32 chr2 110753413 110755010 -139932844 + THE1C-int LTR MaLR 3 1575 -5 1869 143 70 17 chr2 110755015 110755371 -139932483 + THE1C LTR MaLR 1 375 0 2547 180 36 0 chr2 110755431 110755897 -139931957 + Tigger7 DNA MER2_type 39 521 -212 389 225 34 0 chr2 110755896 110755985 -139931869 + Tigger7 DNA MER2_type 2400 2491 0 * 384 267 83 11 chr2 110756057 110756237 -139931617 + L1MC5 LINE L1 7709 7901 -60 331 277 8 62 chr2 110756282 110756412 -139931442 + L1ME4a LINE L1 5842 5964 -157 321 247 25 25 chr2 110756347 110756428 -139931426 - L1MC4 LINE L1 -1322 6720 6640 * 571 294 40 51 chr2 110757185 110757461 -139930393 + Charlie8 DNA MER1_type 1 273 -2144 625 315 89 17 chr2 110757526 110757834 -139930020 - L1M LINE L1 -751 5395 5083 625 27 0 0 chr2 110757839 110757947 -139929907 + L1PA4 LINE L1 6064 6171 0 290 293 41 46 chr2 110758176 110758398 -139929456 - L1MEc LINE L1 -963 1613 1362 257 322 28 14 chr2 110758366 110758509 -139929345 - L1MEc LINE L1 -5292 913 769 * 1937 162 7 10 chr2 110758574 110758870 -139928984 - AluJo SINE Alu -17 295 1 182 254 68 17 chr2 110759467 110759526 -139928328 + MIR SINE MIR 199 260 -2 241 297 27 0 chr2 110759766 110759840 -139928014 - MIR SINE MIR -35 227 152 665 174 16 0 chr2 110760429 110760550 -139927304 + LTR19B LTR ERV1 458 580 0 242 268 14 92 chr2 110761691 110761833 -139926021 - MLT1K LTR MaLR -57 531 401 2280 133 0 0 chr2 110762078 110762409 -139925445 + L1P3 LINE L1 6 336 -6125 5370 66 9 0 chr2 110762410 110763094 -139924760 + L1PA8 LINE L1 5483 6172 0 207 0 0 0 chr2 110764519 110764542 -139923312 + (CA)n Simple_repeat Simple_repeat 2 24 0 405 338 28 0 chr2 110764901 110765043 -139922811 - MIR3 SINE MIR -3 205 60 1649 167 34 0 chr2 110765934 110766228 -139921626 + AluJo SINE Alu 5 308 -4 182 311 54 0 chr2 110766327 110766401 -139921453 - MIR3 SINE MIR -24 184 107 13116 31 2 5 chr2 110767090 110768746 -139919108 - L1PA3 LINE L1 -2022 4124 2473 10918 25 1 0 chr2 110768746 110770774 -139917080 + L1PA3 LINE L1 4124 6152 -3 1634 209 46 35 chr2 110770992 110771360 -139916494 - MLT1A2 LTR MaLR -1 373 2 2207 192 24 161 chr2 110771851 110772722 -139915132 - MER21B LTR ERV1 -60 803 52 1533 200 83 21 chr2 110773026 110773240 -139914614 + LTR56 LTR ERV1 9 208 -229 2178 114 13 3 chr2 110773240 110773546 -139914308 - AluSx SINE Alu -3 309 1 1533 200 83 21 chr2 110773546 110773764 -139914090 + LTR56 LTR ERV1 208 437 0 279 0 0 0 chr2 110774297 110774328 -139913526 + (CACAG)n Simple_repeat Simple_repeat 3 33 0 394 307 82 17 chr2 110775263 110775494 -139912360 + LTR16A LTR ERVL 199 444 -6 8436 63 9 10 chr2 110777016 110778088 -139909766 + MER11C LTR ERVK 1 1071 0 244 185 19 0 chr2 110778418 110778472 -139909382 + MLT1K LTR MaLR 516 570 -18 198 0 0 0 chr2 110778823 110778845 -139909009 + (A)n Simple_repeat Simple_repeat 1 22 0 206 214 0 0 chr2 110779624 110779666 -139908188 + G-rich Low_complexity Low_complexity 5 46 0 2502 64 0 3 chr2 110779806 110780118 -139907736 + AluY SINE Alu 1 311 0 454 287 55 33 chr2 110781511 110781692 -139906162 - L2 LINE L2 -2 3311 3127 198 333 48 32 chr2 110782094 110782220 -139905634 - L2 LINE L2 -563 2751 2624 1982 121 84 31 chr2 110782661 110783017 -139904837 + THE1C LTR MaLR 1 375 0 9057 146 17 32 chr2 110783019 110784616 -139903238 + THE1C-int LTR MaLR 3 1575 -5 1814 152 70 14 chr2 110784621 110784976 -139902878 + THE1C LTR MaLR 1 375 0 2572 178 36 0 chr2 110785036 110785503 -139902351 + Tigger7 DNA MER2_type 39 522 -1965 402 214 34 0 chr2 110785502 110785591 -139902263 + Tigger7 DNA MER2_type 2396 2487 0 * 384 267 83 11 chr2 110785663 110785843 -139902011 + L1MC5 LINE L1 7709 7901 -60 339 303 41 33 chr2 110785888 110786010 -139901844 + L1ME4a LINE L1 5842 5964 -157 306 213 40 27 chr2 110785967 110786042 -139901812 - L1MEc LINE L1 -4369 1846 1771 * 571 294 40 51 chr2 110786795 110787071 -139900783 + Charlie8 DNA MER1_type 1 273 -2144 625 315 89 17 chr2 110787136 110787444 -139900410 - L1M LINE L1 -751 5395 5083 625 27 0 0 chr2 110787449 110787560 -139900294 + L1PA4 LINE L1 6064 6174 0 307 288 41 46 chr2 110787789 110788011 -139899843 - L1MEc LINE L1 -963 1613 1362 257 322 28 14 chr2 110787979 110788122 -139899732 - L1MEc LINE L1 -5292 913 769 * 1911 166 7 10 chr2 110788187 110788483 -139899371 - AluJo SINE Alu -17 295 1 182 254 68 17 chr2 110789080 110789139 -139898715 + MIR SINE MIR 199 260 -2 241 297 27 0 chr2 110789379 110789453 -139898401 - MIR SINE MIR -35 227 152 681 208 102 78 chr2 110790577 110790861 -139896993 + L1MC5 LINE L1 6747 7037 -924 273 266 122 65 chr2 110791139 110791278 -139896576 + MIR SINE MIR 47 193 -69 297 0 0 0 chr2 110791531 110791564 -139896290 + (CA)n Simple_repeat Simple_repeat 2 34 0 602 299 131 17 chr2 110791679 110791901 -139895953 + L1MC4a LINE L1 5576 5771 -2037 186 71 0 0 chr2 110791901 110791929 -139895925 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 602 299 131 17 chr2 110791929 110792064 -139895790 + L1MC4a LINE L1 5771 5974 -1834 3005 137 35 4 chr2 110793030 110793519 -139894335 - L1MB3 LINE L1 -7 6176 5673 1882 149 40 0 chr2 110793544 110793840 -139894014 + AluJb SINE Alu 1 308 -4 1172 187 36 32 chr2 110794002 110794253 -139893601 + MER82 DNA MER2_type 402 653 0 286 280 37 0 chr2 110794275 110794382 -139893472 - L1MC/D LINE L1 -2011 5797 5687 347 303 13 78 chr2 110794942 110795022 -139892832 - MER112 DNA MER1_type -16 244 160 1541 175 34 38 chr2 110795022 110795313 -139892541 + AluJo SINE Alu 5 294 -18 347 303 13 78 chr2 110795313 110795463 -139892391 - MER112 DNA MER1_type -100 160 29 391 312 127 9 chr2 110797095 110797316 -139890538 + L2 LINE L2 3009 3255 -17 379 225 70 14 chr2 110799055 110799197 -139888657 + LTR33A LTR ERVL 374 523 0 328 263 102 51 chr2 110799209 110799346 -139888508 + L2 LINE L2 3162 3305 -8 410 319 48 29 chr2 110799811 110800021 -139887833 - MIR SINE MIR -15 247 34 2137 229 42 37 chr2 110801410 110802003 -139885851 + L1MD2 LINE L1 5528 6123 -236 238 288 0 0 chr2 110802013 110802086 -139885768 + L1MD2 LINE L1 6197 6269 -90 * 16092 185 14 14 chr2 110802082 110807682 -139880172 + L1PB1 LINE L1 650 6247 -620 303 71 0 0 chr2 110807682 110807724 -139880130 + (TA)n Simple_repeat Simple_repeat 2 43 0 16092 185 14 14 chr2 110807724 110807966 -139879888 + L1PB1 LINE L1 6247 6487 -380 2484 46 16 13 chr2 110807966 110808271 -139879583 + AluY SINE Alu 1 306 -5 16092 185 14 14 chr2 110808271 110808396 -139879458 + L1PB1 LINE L1 6487 6865 -2 1107 263 110 0 chr2 110808419 110808738 -139879116 + L1MD3 LINE L1 7629 7982 -13 305 248 119 20 chr2 110811049 110811150 -139876704 - MIR SINE MIR -67 141 31 342 0 0 0 chr2 110812392 110812430 -139875424 + (TG)n Simple_repeat Simple_repeat 1 38 0 288 0 0 0 chr2 110812429 110812461 -139875393 + (GA)n Simple_repeat Simple_repeat 1 32 0 * 182 37 37 0 chr2 110812622 110812649 -139875205 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 383 341 67 51 chr2 110812672 110812986 -139874868 - L1MDa LINE L1 -6194 346 28 411 299 37 70 chr2 110813000 110813214 -139874640 + L2 LINE L2 3106 3312 -1 238 269 15 0 chr2 110813562 110813629 -139874225 - MLT1K LTR MaLR -519 69 2 1445 160 103 4 chr2 110814303 110814566 -139873288 - AluJb SINE Alu -23 289 1 382 314 48 0 chr2 110814927 110815032 -139872822 + L2 LINE L2 3161 3270 -2 357 112 71 41 chr2 110816239 110816259 -139871595 + (TAAA)n Simple_repeat Simple_repeat 2 20 -156 1532 177 23 15 chr2 110816259 110816524 -139871330 + AluJb SINE Alu 1 267 -45 357 112 71 41 chr2 110816524 110816673 -139871181 + (TAAA)n Simple_repeat Simple_repeat 20 176 0 2273 100 36 0 chr2 110817104 110817405 -139870449 - AluSq SINE Alu -1 312 1 624 246 131 0 chr2 110817702 110817885 -139869969 + MIR SINE MIR 56 262 0 440 167 0 11 chr2 110818189 110818279 -139869575 - L1M4 LINE L1 -872 5274 5186 33 73 0 0 chr2 110818396 110818464 -139869390 + AT_rich Low_complexity Low_complexity 1 68 0 944 256 37 9 chr2 110819751 110819966 -139867888 + MER58A DNA MER1_type 4 224 0 549 81 27 0 chr2 110821544 110821618 -139866236 + MADE1 DNA Mariner 5 80 0 667 259 61 96 chr2 110821817 110822130 -139865724 + MLT1I LTR MaLR 39 340 -69 265 281 58 41 chr2 110822497 110822618 -139865236 + MIR3 SINE MIR 58 180 -28 228 214 29 86 chr2 110822656 110822726 -139865128 + L2 LINE L2 3203 3268 -4 386 197 53 0 chr2 110823510 110823586 -139864268 - MER116 DNA Mariner 0 80 1 1359 183 99 70 chr2 110824684 110825039 -139862815 - MLT1A1 LTR MaLR 0 365 1 560 321 77 52 chr2 110825439 110825841 -139862013 + L2 LINE L2 2855 3266 -6 311 226 0 65 chr2 110825977 110826070 -139861784 - L1MC4 LINE L1 -1 8041 7955 552 288 28 71 chr2 110827022 110827176 -139860678 + MIR SINE MIR 47 191 -71 1991 155 3 0 chr2 110827176 110827479 -139860375 + AluSx SINE Alu 1 304 -8 552 288 28 71 chr2 110827479 110827536 -139860318 + MIR SINE MIR 191 249 -13 290 242 0 0 chr2 110827551 110827617 -139860237 + L1ME1 LINE L1 2117 2182 -4202 * 7900 219 64 13 chr2 110827603 110830020 -139857834 + L1ME1 LINE L1 2108 4658 -1724 1936 53 0 0 chr2 110830081 110830308 -139857546 + AluY SINE Alu 83 309 -2 25 51 0 0 chr2 110830414 110830453 -139857401 + AT_rich Low_complexity Low_complexity 1 39 0 14468 31 14 0 chr2 110830757 110833130 -139854724 + L1PA4 LINE L1 3771 6155 0 258 32 0 0 chr2 110834008 110834039 -139853815 + (CA)n Simple_repeat Simple_repeat 2 32 0 479 292 5 64 chr2 110836080 110836299 -139851555 - MIR SINE MIR 0 262 57 2775 185 20 47 chr2 110836321 110836495 -139851359 + L1ME1 LINE L1 5646 5823 -579 2367 76 0 13 chr2 110836495 110836810 -139851044 + AluY SINE Alu 1 311 0 2775 185 20 47 chr2 110836810 110837039 -139850815 + L1ME1 LINE L1 5823 6030 -372 1600 119 151 90 chr2 110837039 110837152 -139850702 - MER47A DNA MER2_type -1957 366 261 1852 145 3 36 chr2 110837152 110837456 -139850398 - AluJo SINE Alu -18 294 1 1600 119 151 90 chr2 110837456 110837687 -139850167 - MER47A DNA MER2_type -2062 261 1 2775 185 20 47 chr2 110837687 110837878 -139849976 + L1ME1 LINE L1 6030 6225 -177 1161 140 5 39 chr2 110837987 110838194 -139849660 - AluJb SINE Alu -98 214 15 29 0 0 0 chr2 110838488 110838517 -139849337 + AT_rich Low_complexity Low_complexity 1 29 0 315 248 157 8 chr2 110838671 110838792 -139849062 - MIR3 SINE MIR -68 140 2 1592 204 24 8 chr2 110839784 110840156 -139847698 - MER3 DNA MER1_type 0 2610 2233 466 162 191 9 chr2 110840155 110840260 -139847594 - MER3 DNA MER1_type -87 122 46 * 2574 191 76 12 chr2 110840360 110840497 -139847357 + MLT1E LTR MaLR 25 152 -441 2937 84 14 0 chr2 110840497 110840856 -139846998 - THE1B LTR MaLR 0 364 1 2574 191 76 12 chr2 110840856 110841232 -139846622 + MLT1E LTR MaLR 152 571 -22 4073 189 62 23 chr2 110841300 110842078 -139845776 - MER21B LTR ERV1 -35 828 17 285 29 0 0 chr2 110842078 110842112 -139845742 + (CA)n Simple_repeat Simple_repeat 1 34 0 4073 189 62 23 chr2 110842112 110842130 -139845724 - MER21B LTR ERV1 -846 17 1 299 216 233 9 chr2 110842308 110842424 -139845430 - L2 LINE L2 -1 3312 3171 1096 272 128 26 chr2 110842547 110842796 -139845058 + L2 LINE L2 2474 2696 -617 2583 167 26 15 chr2 110842796 110843252 -139844602 + MER65C LTR ERV1 1 461 0 1096 272 128 26 chr2 110843252 110843754 -139844100 + L2 LINE L2 2696 3302 -11 236 236 18 0 chr2 110843830 110843885 -139843969 + MIR SINE MIR 91 146 -116 884 159 13 0 chr2 110844463 110844620 -139843234 + L1ME1 LINE L1 6239 6397 -5 302 257 54 0 chr2 110845418 110845492 -139842362 + L2 LINE L2 3153 3230 -42 265 229 71 14 chr2 110845516 110845586 -139842268 + L1ME LINE L1 5557 5630 -491 24 0 0 0 chr2 110846335 110846359 -139841495 + AT_rich Low_complexity Low_complexity 1 24 0 1934 151 3 10 chr2 110846663 110846975 -139840879 - AluJb SINE Alu -2 310 1 232 270 60 20 chr2 110846994 110847094 -139840760 - L1MC/D LINE L1 -1886 5922 5819 * 437 217 35 0 chr2 110847093 110847208 -139840646 + L1MDa LINE L1 1 119 -6421 482 299 71 22 chr2 110847328 110847512 -139840342 - MIR SINE MIR -63 199 7 229 189 40 14 chr2 110847571 110847645 -139840209 - L1MC/D LINE L1 -1011 5333 5258 2500 146 62 0 chr2 110849465 110849868 -139837986 + MSTA LTR MaLR 1 428 0 329 270 36 27 chr2 110850427 110850538 -139837316 + MIR SINE MIR 151 262 0 717 128 0 0 chr2 110851929 110852038 -139835816 - AluSg/x SINE Alu -9 301 193 3183 125 5 2 chr2 110852454 110852901 -139834953 + LTR7 LTR ERV1 1 448 -2 4496 113 19 32 chr2 110852903 110853765 -139834089 + HERVH LTR ERV1 1 774 -6939 183 232 36 36 chr2 110854094 110854150 -139833704 - L3 LINE CR1 -670 907 852 671 325 91 59 chr2 110854261 110854627 -139833227 - L2 LINE L2 0 3272 2919 1694 201 7 0 chr2 110854627 110854915 -139832939 + AluJb SINE Alu 1 290 -22 671 325 91 59 chr2 110854915 110855239 -139832615 - L2 LINE L2 -353 2919 2549 3825 80 47 57 chr2 110855241 110855412 -139832442 - LTR66 LTR ERVL 0 610 439 258 32 0 0 chr2 110855412 110855443 -139832411 + (TA)n Simple_repeat Simple_repeat 2 32 0 3825 80 47 57 chr2 110855443 110855887 -139831967 - LTR66 LTR ERVL -171 439 1 627 156 0 0 chr2 110855889 110855998 -139831856 + LTR47A LTR ERVL 1 109 -343 1054 189 33 0 chr2 110856039 110856251 -139831603 + LTR47A LTR ERVL 234 452 0 562 299 132 14 chr2 110856255 110856620 -139831234 - L1MEc LINE L1 -4772 1612 1205 * 715 303 33 10 chr2 110856617 110856921 -139830933 - L1MEc LINE L1 -6013 550 240 325 255 166 41 chr2 110856957 110857102 -139830752 + L2 LINE L2 3146 3308 -5 277 221 58 0 chr2 110857122 110857226 -139830628 - MER69 DNA AcHobo -106 2420 2311 2081 129 0 32 chr2 110857395 110857705 -139830149 + AluSx SINE Alu 1 300 -12 2474 215 118 22 chr2 110858341 110859147 -139828707 - L1M4 LINE L1 -1219 4927 4045 42 20 0 0 chr2 110859755 110859804 -139828050 + AT_rich Low_complexity Low_complexity 1 49 0 189 161 11 54 chr2 110860531 110860624 -139827230 + (TA)n Simple_repeat Simple_repeat 1 89 0 5678 82 3 4 chr2 110860701 110861467 -139826387 - L1PA8 LINE L1 -3 6169 5405 2041 156 0 7 chr2 110861580 110861887 -139825967 + AluSx SINE Alu 1 305 -7 22 56 0 0 chr2 110862164 110862200 -139825654 + AT_rich Low_complexity Low_complexity 1 36 0 281 250 152 11 chr2 110862683 110862775 -139825079 - MIR3 SINE MIR -23 185 81 662 198 9 0 chr2 110862872 110862988 -139824866 + FLAM_A SINE Alu 1 117 -16 3256 172 88 23 chr2 110863591 110864398 -139823456 + L1MDa LINE L1 1563 2427 -4113 2163 128 0 3 chr2 110864398 110864695 -139823159 + AluSq SINE Alu 1 296 -17 3256 172 88 23 chr2 110864695 110864717 -139823137 + L1MDa LINE L1 2427 2446 -4094 2221 137 34 17 chr2 110864717 110865075 -139822779 + THE1B LTR MaLR 1 364 0 11843 87 4 4 chr2 110865075 110866654 -139821200 + THE1B-int LTR MaLR 1 1580 0 746 149 0 0 chr2 110866654 110866768 -139821086 + THE1B LTR MaLR 1 114 -250 1137 108 0 42 chr2 110866768 110866934 -139820920 - AluSg/x SINE Alu -11 301 143 1423 138 47 24 chr2 110866934 110867188 -139820666 + THE1B LTR MaLR 105 364 0 337 253 0 12 chr2 110867188 110867271 -139820583 + L1MDa LINE L1 2442 2523 -4017 607 217 14 0 chr2 110867271 110867409 -139820445 - L1ME LINE L1 -5920 150 11 2389 87 0 0 chr2 110867473 110867773 -139820081 - AluSc SINE Alu -9 300 1 571 314 49 4 chr2 110868201 110868465 -139819389 + L2 LINE L2 2336 2611 -703 1886 250 14 32 chr2 110868614 110869267 -139818587 - L1MEc LINE L1 -3113 3102 2462 257 277 0 21 chr2 110869282 110869376 -139818478 - L1MEc LINE L1 -3986 2410 2319 382 216 28 17 chr2 110869376 110869522 -139818332 - L1M4 LINE L1 -726 5442 5293 3348 244 22 36 chr2 110869527 110870666 -139817188 - L1M4 LINE L1 -2053 4093 2971 1821 171 3 0 chr2 110871583 110871869 -139815985 + AluJo SINE Alu 1 287 -25 213 39 0 0 chr2 110871869 110871895 -139815959 + (CTA)n Simple_repeat Simple_repeat 1 26 0 563 253 73 7 chr2 110871903 110872053 -139815801 - MIR SINE MIR 0 262 103 534 268 136 51 chr2 110872815 110873169 -139814685 - L2 LINE L2 0 3313 2930 488 335 49 34 chr2 110873278 110873627 -139814227 - L2 LINE L2 -1485 1829 1476 2149 120 0 0 chr2 110874363 110874655 -139813199 - AluSx SINE Alu -16 296 5 1914 162 3 10 chr2 110874739 110875035 -139812819 - AluJb SINE Alu -18 294 1 22 35 0 0 chr2 110875680 110875709 -139812145 + AT_rich Low_complexity Low_complexity 1 29 0 560 166 102 6 chr2 110876486 110876643 -139811211 + L1MA4A LINE L1 6129 6300 -3 * 683 271 42 28 chr2 110876633 110876989 -139810865 + L1MC/D LINE L1 5326 5687 -434 488 323 116 29 chr2 110877011 110877460 -139810394 + MLT1J LTR MaLR 13 500 -11 884 174 82 14 chr2 110877536 110877803 -139810051 + MER33 DNA MER1_type 1 255 -69 2558 208 65 66 chr2 110877810 110878614 -139809240 + MER21B LTR ERV1 1 803 -60 376 141 16 0 chr2 110878638 110878702 -139809152 + MER33 DNA MER1_type 260 324 0 445 307 32 43 chr2 110879540 110879817 -139808037 + MARNA DNA Mariner 111 384 -202 306 313 0 0 chr2 110880585 110880681 -139807173 + CT-rich Low_complexity Low_complexity 1 96 0 438 269 156 14 chr2 110881003 110881144 -139806710 + MIR SINE MIR 13 173 -89 430 176 76 84 chr2 110881768 110881887 -139805967 - L2 LINE L2 0 3313 3196 1876 241 110 43 chr2 110882224 110883036 -139804818 - L1MCa LINE L1 -2257 4169 3413 1653 180 16 10 chr2 110883036 110883342 -139804512 + AluJb SINE Alu 1 308 -4 1876 241 110 43 chr2 110883342 110883485 -139804369 - L1MCa LINE L1 -3013 3413 3281 2098 93 69 0 chr2 110883485 110883774 -139804080 - AluSc SINE Alu 0 309 1 1876 241 110 43 chr2 110883774 110883881 -139803973 - L1MCa LINE L1 -3145 3281 3035 2011 262 72 27 chr2 110883985 110884147 -139803707 - L1MCa LINE L1 -4323 2284 2131 3182 200 25 16 chr2 110884147 110884793 -139803061 - MER82 DNA MER2_type -1 652 1 2011 262 72 27 chr2 110884793 110885767 -139802087 - L1MCa LINE L1 -4476 2131 895 363 297 71 63 chr2 110885864 110886865 -139800989 - L1ME LINE L1 -5339 1057 59 1396 157 4 4 chr2 110887020 110887256 -139800598 + MER46A DNA MER2_type 1 236 0 1878 138 17 17 chr2 110887339 110887635 -139800219 - AluJo SINE Alu -16 296 1 264 267 97 25 chr2 110888418 110888548 -139799306 + MIR SINE MIR 13 150 -67 222 328 99 23 chr2 110888575 110888706 -139799148 + L3 LINE CR1 1434 1574 -3 292 255 61 20 chr2 110889497 110889595 -139798259 + MIR3 SINE MIR 104 205 -3 326 176 44 0 chr2 110889632 110889700 -139798154 - MIR SINE MIR -24 238 168 207 0 0 0 chr2 110890043 110890066 -139797788 + (T)n Simple_repeat Simple_repeat 1 23 0 8072 221 31 35 chr2 110890123 110891177 -139796677 + L1PA16 LINE L1 9 1065 -6519 183 100 0 0 chr2 110891177 110891207 -139796647 + (CAA)n Simple_repeat Simple_repeat 2 31 0 8072 221 31 35 chr2 110891207 110892725 -139795129 + L1PA16 LINE L1 1065 2587 -4997 3480 104 12 8 chr2 110892725 110893234 -139794620 + MER9 LTR ERVK 1 511 0 8072 221 31 35 chr2 110893234 110893590 -139794264 + L1PA16 LINE L1 2587 4274 -3310 222 37 0 0 chr2 110896437 110896464 -139791390 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 12596 149 16 4 chr2 110896466 110898789 -139789065 + L1PA16 LINE L1 4273 6623 -961 5707 131 84 68 chr2 110898790 110900351 -139787503 - pTR5 LTR ERV1 0 2438 66 879 149 170 9 chr2 110900351 110900624 -139787230 + L1PA16 LINE L1 6620 6967 -627 33798 56 2 0 chr2 110900624 110904799 -139783055 + L1P LINE L1 2 4186 -1960 3940 117 30 5 chr2 110904899 110905495 -139782359 + L1PA16 LINE L1 6985 7595 -9 827 164 0 0 chr2 110905877 110906005 -139781849 - FLAM_A SINE Alu -5 128 1 475 277 92 38 chr2 110906121 110906359 -139781495 - L1ME LINE L1 -403 5718 5468 308 252 146 0 chr2 110906374 110906477 -139781377 - L1ME LINE L1 -2386 5422 5305 21 0 0 0 chr2 110907134 110907155 -139780699 + GC_rich Low_complexity Low_complexity 1 21 0 1497 209 153 72 chr2 110907826 110908505 -139779349 - L1ME3A LINE L1 -8 6162 5429 500 172 178 70 chr2 110908949 110909106 -139778748 + MER5A DNA MER1_type 16 189 0 2327 103 0 0 chr2 110909548 110909860 -139777994 + AluSx SINE Alu 1 312 0 1228 96 0 6 chr2 110910555 110910733 -139777121 + AluSg/x SINE Alu 134 310 -2 665 259 29 6 chr2 110910924 110911098 -139776756 + MER5B DNA MER1_type 1 178 0 1432 132 0 5 chr2 110912688 110912901 -139774953 + AluSx SINE Alu 1 212 -100 4505 131 7 27 chr2 110913010 110913750 -139774104 + L1PB2 LINE L1 5418 6142 -9 191 299 61 100 chr2 110913837 110914068 -139773786 - L2 LINE L2 -32 3240 3019 263 54 27 0 chr2 110914204 110914241 -139773613 - MLT1D LTR MaLR 0 624 587 707 257 58 38 chr2 110914241 110914642 -139773212 - MLT1D LTR MaLR -106 399 3 838 216 68 13 chr2 110914686 110914922 -139772932 - AluJo SINE Alu -8 304 56 1547 177 131 67 chr2 110914924 110915360 -139772494 - LTR12 LTR ERV1 -234 480 17 389 138 26 9 chr2 110915360 110915433 -139772421 - AluJ/FLAM SINE Alu -244 58 1 388 260 0 19 chr2 110915631 110915735 -139772119 + Charlie8 DNA MER1_type 83 184 -2233 195 298 155 54 chr2 110915915 110916083 -139771771 - MIR SINE MIR -62 200 16 189 77 0 0 chr2 110917181 110917207 -139770647 + L2 LINE L2 3209 3234 -38 951 184 0 0 chr2 110917445 110917608 -139770246 + FRAM SINE Alu 4 166 0 354 249 71 47 chr2 110918112 110918281 -139769573 - MER5B DNA MER1_type -1 177 5 928 209 80 80 chr2 110918634 110919021 -139768833 + MLT1H LTR MaLR 9 395 -154 406 330 39 6 chr2 110919086 110919268 -139768586 - Charlie8 DNA MER1_type -2226 191 4 1511 165 11 37 chr2 110919858 110920131 -139767723 + Tigger7 DNA MER2_type 1 266 -284 593 182 0 0 chr2 110920129 110920228 -139767626 + Tigger7 DNA MER2_type 2389 2487 0 * 2443 68 0 0 chr2 110920413 110920724 -139767130 - AluY SINE Alu 0 311 1 1664 171 27 0 chr2 110921139 110921438 -139766416 + AluJb SINE Alu 5 311 -1 265 241 19 0 chr2 110921480 110921534 -139766320 - MER5B DNA MER1_type 0 178 124 25063 95 9 11 chr2 110921554 110925100 -139762754 + L1P LINE L1 11 3549 -2597 1573 169 20 10 chr2 110925223 110925524 -139762330 + AluJb SINE Alu 1 304 -8 722 182 110 7 chr2 110926130 110926284 -139761570 + AluJb SINE Alu 137 306 -6 985 148 11 21 chr2 110928201 110928217 -139759637 - AluSc SINE Alu -4 305 290 1627 78 60 0 chr2 110928217 110928434 -139759420 - AluSc SINE Alu -8 301 72 985 148 11 21 chr2 110928434 110928606 -139759248 - AluSc SINE Alu -19 290 119 566 120 0 0 chr2 110928606 110928681 -139759173 - AluY SINE Alu -25 286 212 1638 55 0 28 chr2 110929008 110929226 -139758628 - AluY SINE Alu -99 212 1 560 86 0 0 chr2 110929226 110929296 -139758558 - AluSc SINE Alu -165 144 75 1760 58 5 0 chr2 110929296 110929520 -139758334 - AluY SINE Alu -17 294 70 1912 121 14 10 chr2 110929731 110930020 -139757834 + AluSc SINE Alu 1 290 -19 1841 106 67 7 chr2 110930537 110930821 -139757033 + AluSx SINE Alu 1 301 -11 213 39 0 0 chr2 110931065 110931091 -139756763 + (TTTTA)n Simple_repeat Simple_repeat 5 30 0 2028 104 3 33 chr2 110931093 110931392 -139756462 - AluSp SINE Alu -23 290 1 327 271 74 41 chr2 110932351 110932473 -139755381 + MIR SINE MIR 124 249 -13 580 244 1 24 chr2 110932913 110933077 -139754777 - L1PB4 LINE L1 0 6156 6002 32 0 0 0 chr2 110933576 110933608 -139754246 + AT_rich Low_complexity Low_complexity 1 32 0 2022 247 102 10 chr2 110933763 110934797 -139753057 + L1MC3 LINE L1 4304 5444 -743 1576 198 121 22 chr2 110934800 110935143 -139752711 + MLT2B2 LTR ERVL 76 458 -57 1530 166 53 0 chr2 110935143 110935426 -139752428 - AluJb SINE Alu -13 299 2 1576 198 121 22 chr2 110935426 110935446 -139752408 + MLT2B2 LTR ERVL 458 475 -40 201 178 0 0 chr2 110935450 110935495 -139752359 + (TA)n Simple_repeat Simple_repeat 1 45 0 1633 219 75 39 chr2 110935510 110936053 -139751801 + L1MC3 LINE L1 5456 6018 -1767 488 235 0 0 chr2 110939049 110939151 -139748703 + AluJb SINE Alu 121 222 -90 927 119 0 0 chr2 110939155 110939281 -139748573 + AluSg/x SINE Alu 162 287 -23 3237 161 34 64 chr2 110989526 110989581 -139698273 - L1MB8 LINE L1 -24 6154 6099 2001 88 9 94 chr2 110989581 110989922 -139697932 - AluSx SINE Alu 0 312 1 3237 161 34 64 chr2 110989922 110990569 -139697285 - L1MB8 LINE L1 -79 6099 5473 406 236 55 0 chr2 110990552 110990679 -139697175 - L1MB8 LINE L1 -1637 4509 4376 * 2115 123 3 0 chr2 110990680 110990988 -139696866 - AluSq SINE Alu -4 309 1 2164 84 0 3 chr2 110990999 110991317 -139696537 - AluSq SINE Alu 0 321 5 309 284 0 0 chr2 110991330 110991446 -139696408 + T-rich Low_complexity Low_complexity 1 116 0 6225 106 29 4 chr2 110991626 110991988 -139695866 - L1PA10 LINE L1 -313 5855 5504 2011 127 13 7 chr2 110991988 110992295 -139695559 - AluSx SINE Alu -3 309 1 6225 106 29 4 chr2 110992295 110993323 -139694531 - L1PA10 LINE L1 -664 5504 4434 425 214 40 40 chr2 110993904 110994030 -139693824 - L2 LINE L2 -15 3298 3173 2161 118 0 0 chr2 110994574 110994878 -139692976 - AluSx SINE Alu -8 304 1 297 0 0 0 chr2 110994904 110994937 -139692917 + (TG)n Simple_repeat Simple_repeat 1 33 0 1702 121 90 3 chr2 110995102 110995458 -139692396 + L1PA11 LINE L1 5788 6174 0 234 282 94 0 chr2 110997157 110997242 -139690612 + MIR3 SINE MIR 86 178 -30 620 259 16 54 chr2 110997373 110997558 -139690296 - MER5B DNA MER1_type 0 178 1 243 61 0 0 chr2 110997618 110997630 -139690224 + (TG)n Simple_repeat Simple_repeat 1 45 0 243 61 0 0 chr2 110997630 110997663 -139690191 + (TG)n Simple_repeat Simple_repeat 2 34 0 2179 115 0 0 chr2 110998221 110998516 -139689338 + AluSc SINE Alu 1 295 -14 2366 89 0 10 chr2 110998526 110998828 -139689026 + AluSp SINE Alu 1 299 -14 893 224 5 29 chr2 110998979 110999112 -139688742 - L1 LINE L1 -1869 4277 4142 2775 77 92 96 chr2 110999112 110999299 -139688555 + MER4C LTR ERV1 1 187 -278 1892 155 0 10 chr2 110999299 110999595 -139688259 + AluJb SINE Alu 1 293 -19 2265 96 3 25 chr2 110999598 110999912 -139687942 + AluSg SINE Alu 1 307 -3 2775 77 92 96 chr2 110999912 111000187 -139687667 + MER4C LTR ERV1 189 465 0 893 224 5 29 chr2 111000187 111000258 -139687596 - L1 LINE L1 -2004 4142 4078 2282 193 27 11 chr2 111000269 111000759 -139687095 + MER21B LTR ERV1 1 556 -307 760 135 0 0 chr2 111000773 111000877 -139686977 + AluJb SINE Alu 33 136 -176 2014 120 11 0 chr2 111000882 111001157 -139686697 + AluSq SINE Alu 1 278 -35 2017 140 10 3 chr2 111001241 111001549 -139686305 + AluSx SINE Alu 3 312 0 2262 110 0 0 chr2 111001552 111001851 -139686003 + AluSc SINE Alu 4 302 -7 914 198 0 36 chr2 111001856 111001869 -139685985 + AluJb SINE Alu 120 132 -180 225 0 0 0 chr2 111001869 111001894 -139685960 + (CA)n Simple_repeat Simple_repeat 2 26 0 914 198 0 36 chr2 111001894 111002072 -139685782 + AluJb SINE Alu 132 304 -8 1068 187 126 0 chr2 111002091 111002305 -139685549 + MER21B LTR ERV1 604 844 -19 448 203 7 128 chr2 111002309 111002457 -139685397 - L1 LINE L1 -2073 4073 3944 188 331 58 29 chr2 111002620 111002759 -139685095 - MIR3 SINE MIR -63 145 3 257 282 118 9 chr2 111002823 111002933 -139684921 - MER5A DNA MER1_type -6 183 62 834 189 70 66 chr2 111003245 111003416 -139684438 - ORSL DNA AcHobo -30 245 71 2199 106 0 7 chr2 111003416 111003719 -139684135 + AluSg SINE Alu 1 301 -9 834 189 70 66 chr2 111003719 111003791 -139684063 - ORSL DNA AcHobo -204 71 1 2218 81 3 3 chr2 111004238 111004545 -139683309 - AluSg SINE Alu 0 307 1 1110 139 12 0 chr2 111004611 111004784 -139683070 + MER2 DNA MER2_type 37 211 -134 27 73 0 0 chr2 111005287 111005342 -139682512 + AT_rich Low_complexity Low_complexity 1 55 0 2664 26 7 3 chr2 111006470 111006777 -139681077 - AluY SINE Alu -3 308 1 21 36 0 0 chr2 111007239 111007267 -139680587 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 111007777 111007806 -139680048 + AT_rich Low_complexity Low_complexity 1 29 0 195 340 128 33 chr2 111008887 111009193 -139678661 - L2 LINE L2 -647 2667 2333 188 306 255 10 chr2 111010585 111010683 -139677171 + MIR3 SINE MIR 33 154 -54 2402 85 7 0 chr2 111012538 111012845 -139675009 + AluSp SINE Alu 1 309 -4 2839 227 96 63 chr2 111013644 111015382 -139672472 - L1ME2 LINE L1 -19 6214 4418 1772 228 45 67 chr2 111015408 111016115 -139671739 + L1MC4 LINE L1 7363 8042 0 2212 106 16 16 chr2 111016257 111016568 -139671286 + AluSx SINE Alu 1 311 -1 542 248 23 39 chr2 111016579 111016837 -139671017 - L1ME2 LINE L1 -5398 998 745 1028 94 62 38 chr2 111016844 111017004 -139670850 + AluSg/x SINE Alu 130 293 -17 707 260 123 83 chr2 111017009 111017385 -139670469 - L1ME2 LINE L1 -5657 739 325 2560 152 13 42 chr2 111017385 111017832 -139670022 - Tigger2a DNA MER2_type 0 434 1 707 260 123 83 chr2 111017832 111018105 -139669749 - L1ME2 LINE L1 -6071 325 64 1496 123 36 89 chr2 111018300 111018665 -139669189 - MER4A LTR ERV1 0 664 261 572 144 21 10 chr2 111018665 111018762 -139669092 - MER4A LTR ERV1 -566 98 1 4173 92 63 7 chr2 111019336 111019904 -139667950 - MER4A LTR ERV1 0 600 1 2372 95 0 9 chr2 111021482 111021797 -139666057 - AluSx SINE Alu 0 312 1 1766 130 72 17 chr2 111022336 111022628 -139665226 + AluJb SINE Alu 1 308 -4 2254 102 0 3 chr2 111022636 111022929 -139664925 + AluSq SINE Alu 1 292 -21 283 136 0 0 chr2 111023099 111023186 -139664668 + Alu SINE Alu 239 325 0 2158 128 0 3 chr2 111023191 111023497 -139664357 + AluSp SINE Alu 1 305 -8 807 295 136 32 chr2 111023911 111024802 -139663052 + L2 LINE L2 2313 3300 -13 213 39 0 0 chr2 111024811 111024837 -139663017 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 1518 121 91 98 chr2 111026142 111026439 -139661415 + AluJb SINE Alu 1 295 -17 1740 160 28 3 chr2 111026442 111026729 -139661125 + AluJb SINE Alu 1 294 -18 2047 124 3 10 chr2 111026761 111027084 -139660770 + AluSx SINE Alu 1 312 0 2206 109 0 16 chr2 111027087 111027460 -139660394 + AluSp SINE Alu 1 313 0 592 256 72 14 chr2 111027538 111027745 -139660109 + MIR SINE MIR 30 248 -14 2237 112 3 0 chr2 111027873 111028167 -139659687 + AluSx SINE Alu 2 296 -16 2148 119 3 0 chr2 111028167 111028461 -139659393 + AluSx SINE Alu 1 296 -16 454 291 154 50 chr2 111029048 111029781 -139658073 + L2 LINE L2 2154 2962 -352 183 42 0 0 chr2 111030094 111030118 -139657736 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 564 211 39 16 chr2 111030984 111031112 -139656742 - L2 LINE L2 0 3313 3183 2999 148 51 8 chr2 111032090 111032604 -139655250 + MER34B LTR ERV1 1 536 -29 227 346 120 0 chr2 111032742 111032875 -139654979 + L3 LINE CR1 564 712 -865 218 328 0 0 chr2 111032934 111033001 -139654853 + MIR SINE MIR 196 262 0 260 280 80 57 chr2 111033240 111033415 -139654439 + L3 LINE CR1 792 970 -607 1932 110 4 4 chr2 111033699 111033971 -139653883 + AluSx SINE Alu 38 309 -3 220 276 17 0 chr2 111034062 111034120 -139653734 + L3 LINE CR1 1399 1457 -120 1841 127 104 10 chr2 111034821 111035128 -139652726 - MER44D DNA MER2_type -3 606 1 2009 99 4 0 chr2 111035214 111035476 -139652378 + AluSp SINE Alu 37 299 -14 2280 113 0 3 chr2 111035481 111035783 -139652071 - AluSx SINE Alu -11 301 1 255 274 15 132 chr2 111036559 111036756 -139651098 + L1MC4 LINE L1 7594 7767 -275 2580 111 12 0 chr2 111037101 111037434 -139650420 + MER1B DNA MER1_type 1 337 0 2193 121 3 0 chr2 111038432 111038729 -139649125 + AluSx SINE Alu 1 298 -14 2392 84 0 3 chr2 111038740 111039038 -139648816 + AluSx SINE Alu 1 297 -15 5237 142 44 14 chr2 111039064 111039900 -139647954 - MER6 DNA MER2_type -4 861 1 256 331 90 60 chr2 111040062 111040561 -139647293 + L2 LINE L2 2447 2960 -354 2185 163 32 55 chr2 111040644 111041081 -139646773 + LTR3 LTR ERVK 1 427 -2 25 83 0 0 chr2 111041500 111041560 -139646294 + AT_rich Low_complexity Low_complexity 1 60 0 3395 41 3 3 chr2 111041957 111042348 -139645506 + L1PA5 LINE L1 5760 6150 -4 24 0 0 0 chr2 111042348 111042372 -139645482 + AT_rich Low_complexity Low_complexity 1 24 0 626 330 99 0 chr2 111042480 111042701 -139645153 - MIR SINE MIR -8 254 12 22 0 0 0 chr2 111042938 111042960 -139644894 + AT_rich Low_complexity Low_complexity 1 22 0 308 82 41 0 chr2 111043015 111043064 -139644790 - AluJb SINE Alu 0 302 252 1129 194 5 0 chr2 111043064 111043260 -139644594 - AluJb SINE Alu -115 197 1 2314 105 0 0 chr2 111044058 111044354 -139643500 - AluSx SINE Alu -16 296 1 2543 75 0 0 chr2 111045080 111045388 -139642466 - AluY SINE Alu -3 308 1 582 326 111 57 chr2 111045481 111046633 -139641221 + L2 LINE L2 1950 3209 -104 731 267 36 66 chr2 111046701 111047034 -139640820 + L2 LINE L2 2218 2540 -774 277 242 48 0 chr2 111047037 111047099 -139640755 + AluSx SINE Alu 2 66 -236 1606 121 0 9 chr2 111047160 111047384 -139640470 + AluSx SINE Alu 64 305 0 181 0 0 0 chr2 111047384 111047404 -139640450 + (TAA)n Simple_repeat Simple_repeat 2 180 0 288 250 23 38 chr2 111047438 111047570 -139640284 + L2 LINE L2 2553 2682 -632 180 340 78 19 chr2 111047598 111047701 -139640153 + L2 LINE L2 3203 3311 -2 2199 123 0 3 chr2 111048080 111048380 -139639474 - AluSx SINE Alu -13 299 1 829 171 0 0 chr2 111049012 111049141 -139638713 + AluJo SINE Alu 6 134 -178 28 61 0 0 chr2 111050296 111050345 -139637509 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr2 111050583 111050604 -139637250 + AT_rich Low_complexity Low_complexity 1 21 0 2047 116 0 64 chr2 111051282 111051610 -139636244 - AluSx SINE Alu -5 307 1 24 53 0 0 chr2 111052027 111052065 -139635789 + AT_rich Low_complexity Low_complexity 1 38 0 360 246 104 8 chr2 111052281 111052415 -139635439 - MIR SINE MIR -38 224 78 752 280 63 5 chr2 111053260 111053467 -139634387 + MER58A DNA MER1_type 3 221 -3 1062 117 14 0 chr2 111053541 111053686 -139634168 - AluSg/x SINE Alu -12 298 152 2238 101 3 28 chr2 111054314 111054631 -139633223 + AluSp SINE Alu 1 309 -4 795 149 116 100 chr2 111055528 111055695 -139632159 - MER2 DNA MER2_type 0 345 171 2199 102 10 7 chr2 111055695 111055989 -139631865 - AluSg SINE Alu -15 295 1 795 149 116 100 chr2 111055989 111056062 -139631792 - MER2 DNA MER2_type -174 171 101 * 1540 160 10 142 chr2 111056060 111056085 -139631769 - MER7A DNA MER2_type -2692 346 319 2352 120 142 5 chr2 111056085 111056459 -139631395 + MSTA LTR MaLR 2 426 -2 1540 160 10 142 chr2 111056459 111056834 -139631020 - MER7A DNA MER2_type -2719 319 1 362 182 234 0 chr2 111056836 111056913 -139630941 - MER2 DNA MER2_type -249 96 2 467 269 73 65 chr2 111057177 111057300 -139630554 - MIR SINE MIR -3 259 139 2236 93 0 10 chr2 111057300 111057600 -139630254 - AluY SINE Alu -14 297 1 467 269 73 65 chr2 111057600 111057721 -139630133 - MIR SINE MIR -123 139 13 2436 98 0 0 chr2 111057777 111058082 -139629772 - AluSg SINE Alu -5 305 1 373 255 49 76 chr2 111058258 111058469 -139629385 - MIR SINE MIR -29 233 36 1633 176 16 38 chr2 111059325 111059643 -139628211 + AluJo SINE Alu 2 312 0 21 57 0 0 chr2 111059681 111059716 -139628138 + AT_rich Low_complexity Low_complexity 1 35 0 455 160 40 50 chr2 111060109 111060209 -139627645 - Tigger5 DNA MER2_type 0 2323 2225 236 291 0 0 chr2 111060204 111060259 -139627595 - Tigger5 DNA MER2_type -2268 55 1 * 24 0 0 0 chr2 111060586 111060610 -139627244 + AT_rich Low_complexity Low_complexity 1 24 0 1497 192 14 21 chr2 111061142 111061429 -139626425 + AluJo SINE Alu 1 285 -27 818 142 0 0 chr2 111061446 111061566 -139626288 - FLAM_C SINE Alu -23 120 1 24 53 0 0 chr2 111061568 111061606 -139626248 + AT_rich Low_complexity Low_complexity 1 38 0 544 302 54 36 chr2 111061953 111062410 -139625444 + L1MEd LINE L1 1462 1901 -4639 2066 120 16 10 chr2 111062482 111062790 -139625064 + AluSx SINE Alu 1 310 -2 1946 157 0 0 chr2 111062809 111063102 -139624752 + AluSx SINE Alu 12 304 -8 490 245 141 22 chr2 111063276 111063622 -139624232 + L1MEd LINE L1 2440 2835 -3705 316 230 16 56 chr2 111063612 111063649 -139624205 + L1MEd LINE L1 3297 3334 -3206 * 2117 118 3 7 chr2 111063649 111063955 -139623899 + AluSq SINE Alu 1 305 -8 316 230 16 56 chr2 111063955 111064043 -139623811 + L1MEd LINE L1 3334 3417 -3123 827 260 52 41 chr2 111064092 111064535 -139623319 + L1MEd LINE L1 3531 3978 -2562 1737 98 20 4 chr2 111064552 111064807 -139623047 - AluSq SINE Alu -15 298 40 2329 97 0 0 chr2 111064927 111065217 -139622637 + AluSq SINE Alu 1 290 -23 555 284 69 108 chr2 111065220 111065727 -139622127 + L1MEd LINE L1 4075 4561 -1979 780 269 84 30 chr2 111065734 111066140 -139621714 + L1MEc LINE L1 41 468 -5928 2098 111 17 0 chr2 111066232 111066529 -139621325 + AluSx SINE Alu 1 302 -10 5598 157 48 16 chr2 111066799 111067144 -139620710 + L1PA16 LINE L1 4039 4372 -1794 348 43 0 0 chr2 111067144 111067190 -139620664 + (CA)n Simple_repeat Simple_repeat 2 47 0 5598 157 48 16 chr2 111067190 111067392 -139620462 + L1PA16 LINE L1 4372 4566 -1600 1698 163 13 17 chr2 111067392 111067693 -139620161 - AluJb SINE Alu -12 300 1 5598 157 48 16 chr2 111067693 111069223 -139618631 + L1PA16 LINE L1 4566 6157 -9 2205 96 16 10 chr2 111069267 111069570 -139618284 + AluSx SINE Alu 1 305 -7 24 32 0 0 chr2 111070045 111070076 -139617778 + AT_rich Low_complexity Low_complexity 1 31 0 192 135 0 0 chr2 111070918 111070955 -139616899 + (CAAAAA)n Simple_repeat Simple_repeat 3 39 0 493 331 137 21 chr2 111071311 111071743 -139616111 + L1ME LINE L1 6 487 -5583 1194 234 126 130 chr2 111071919 111072705 -139615149 + L1ME LINE L1 525 1313 -4948 2370 92 0 0 chr2 111072705 111073008 -139614846 + AluY SINE Alu 1 303 -8 669 150 40 0 chr2 111073013 111073113 -139614741 + AluSg/x SINE Alu 125 228 -82 1194 234 126 130 chr2 111073113 111073576 -139614278 + L1ME LINE L1 1317 1875 -4386 2162 111 10 0 chr2 111073576 111073864 -139613990 - AluSx SINE Alu -21 291 1 1194 234 126 130 chr2 111073864 111074062 -139613792 + L1ME LINE L1 1875 2072 -4189 415 211 56 0 chr2 111074092 111074163 -139613691 - FRAM/FAM SINE Alu -100 76 2 695 135 0 19 chr2 111074167 111074320 -139613534 - AluSg/x SINE Alu 0 309 194 1906 164 10 6 chr2 111074324 111074635 -139613219 + AluSx SINE Alu 1 312 0 1274 225 141 6 chr2 111074646 111075001 -139612853 + L1ME1 LINE L1 5449 5851 -315 233 277 24 0 chr2 111075083 111075166 -139612688 - L1MC4 LINE L1 -1343 6699 6615 230 185 77 0 chr2 111075136 111075201 -139612653 - L1MCa LINE L1 -4362 2064 1995 * 2278 185 161 29 chr2 111075304 111075498 -139612356 + MLT1E3 LTR MaLR 1 168 -456 2082 141 13 3 chr2 111075498 111075802 -139612052 - AluSq SINE Alu -6 307 1 2278 185 161 29 chr2 111075802 111076158 -139611696 + MLT1E3 LTR MaLR 168 624 0 253 338 29 44 chr2 111076233 111076369 -139611485 + L3 LINE CR1 1420 1553 -24 214 255 64 0 chr2 111076337 111076384 -139611470 + MIR3 SINE MIR 149 198 -10 * 210 321 64 36 chr2 111076405 111076545 -139611309 - L2 LINE L2 -1303 2011 1868 1939 147 3 16 chr2 111076688 111076995 -139610859 + AluSx SINE Alu 1 303 -9 2223 121 0 0 chr2 111077255 111077553 -139610301 + AluSx SINE Alu 1 298 -14 2152 105 26 7 chr2 111077576 111077880 -139609974 + AluSx SINE Alu 1 310 -2 2336 99 0 0 chr2 111078482 111078776 -139609078 - AluSg SINE Alu -16 294 1 312 267 89 28 chr2 111078937 111079163 -139608691 - MIR SINE MIR -3 259 16 266 283 121 45 chr2 111079488 111079711 -139608143 - L1MC4 LINE L1 -1873 6215 5976 222 118 0 0 chr2 111079795 111079829 -139608025 + (CA)n Simple_repeat Simple_repeat 1 34 0 2019 130 3 0 chr2 111079961 111080254 -139607600 - AluSx SINE Alu -18 294 1 913 205 0 0 chr2 111081103 111081264 -139606590 - AluJb SINE Alu -16 296 136 2407 75 7 7 chr2 111081401 111081709 -139606145 + AluY SINE Alu 1 308 -3 27 0 0 0 chr2 111081993 111082020 -139605834 + AT_rich Low_complexity Low_complexity 1 27 0 1557 183 25 14 chr2 111082024 111082308 -139605546 - AluJb SINE Alu -25 287 1 2293 108 0 16 chr2 111083121 111083435 -139604419 - AluSp SINE Alu -4 309 1 2109 93 0 107 chr2 111083628 111083973 -139603881 + AluSx SINE Alu 1 308 -4 2395 98 0 0 chr2 111084243 111084548 -139603306 + AluSx SINE Alu 1 305 -7 249 272 173 35 chr2 111084705 111084878 -139602976 + L3 LINE CR1 790 986 -591 354 271 12 60 chr2 111085204 111085370 -139602484 + LTR16B LTR ERVL 233 390 -74 3530 183 86 46 chr2 111085616 111086438 -139601416 - MER21B LTR ERV1 -3 860 6 234 330 135 13 chr2 111086444 111086674 -139601180 - L1MC4 LINE L1 -2275 5813 5556 534 319 85 27 chr2 111087019 111087279 -139600575 + L3 LINE CR1 1301 1575 -2 2327 88 3 7 chr2 111087461 111087766 -139600088 + AluSq SINE Alu 1 304 -9 1020 210 0 15 chr2 111087939 111088167 -139599687 + AluJb SINE Alu 87 311 0 2173 78 7 20 chr2 111088284 111088607 -139599247 - AluY SINE Alu 0 319 1 1427 147 36 4 chr2 111088871 111088948 -139598906 + AluSx SINE Alu 51 124 -188 2597 54 0 10 chr2 111088948 111089262 -139598592 + AluY SINE Alu 1 311 0 1427 147 36 4 chr2 111089262 111089435 -139598419 + AluSx SINE Alu 124 309 -3 180 125 0 0 chr2 111089442 111089474 -139598380 + (GGGGA)n Simple_repeat Simple_repeat 5 36 0 230 0 33 0 chr2 111089475 111089505 -139598349 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 2007 88 22 4 chr2 111089513 111089785 -139598069 + AluY SINE Alu 1 277 -34 1874 127 0 0 chr2 111090307 111090566 -139597288 + AluSq SINE Alu 53 311 -2 1422 132 9 9 chr2 111090682 111090901 -139596953 + AluSg/x SINE Alu 72 290 -22 209 33 33 0 chr2 111090910 111090940 -139596914 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 231 224 103 19 chr2 111091546 111091653 -139596201 + MER113 DNA MER1_type? 3 118 -403 469 254 61 24 chr2 111091811 111091976 -139595878 - MIR SINE MIR -78 184 14 1902 276 72 2 chr2 111092357 111092886 -139594968 + MLT1G1 LTR MaLR 25 590 -5 23 33 0 0 chr2 111092908 111092938 -139594916 + AT_rich Low_complexity Low_complexity 1 30 0 2283 94 7 0 chr2 111092938 111093235 -139594619 - AluSg SINE Alu -10 300 2 521 162 162 29 chr2 111093262 111093367 -139594487 + MER63 DNA MER1_type 1 745 -91 330 171 200 0 chr2 111093374 111093444 -139594410 + MER63 DNA MER1_type 978 1061 0 2106 125 0 16 chr2 111093849 111094160 -139593694 + AluSx SINE Alu 1 306 -6 2036 113 55 71 chr2 111094253 111094634 -139593220 - THE1C LTR MaLR 0 375 1 1302 204 74 24 chr2 111095047 111095261 -139592593 - MLT1A1 LTR MaLR 0 365 126 2448 90 3 0 chr2 111095261 111095572 -139592282 - AluSp SINE Alu -1 312 1 1302 204 74 24 chr2 111095572 111095696 -139592158 - MLT1A1 LTR MaLR -239 126 10 2321 100 0 6 chr2 111095866 111096177 -139591677 - AluSg SINE Alu -1 309 1 696 86 0 11 chr2 111096178 111096271 -139591583 - AluS SINE Alu -219 93 2 1882 146 0 52 chr2 111096313 111096642 -139591212 - AluJb SINE Alu 0 312 1 1606 112 42 4 chr2 111096965 111097206 -139590648 - AluSg SINE Alu -14 296 47 3371 246 65 12 chr2 111097696 111098062 -139589792 + L1M4 LINE L1 3771 4116 -2030 1522 169 13 62 chr2 111098062 111098370 -139589484 + AluJb SINE Alu 8 300 -12 1997 118 0 23 chr2 111098374 111098678 -139589176 + AluSx SINE Alu 1 297 -15 3371 246 65 12 chr2 111098678 111099341 -139588513 + L1M4 LINE L1 4118 4860 -1286 3832 137 6 2 chr2 111099349 111099970 -139587884 - L1MA5 LINE L1 0 6300 5677 21 0 0 0 chr2 111100111 111100132 -139587722 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 111101306 111101327 -139586527 + AT_rich Low_complexity Low_complexity 1 21 0 1137 113 0 0 chr2 111102028 111102188 -139585666 - L1MA5 LINE L1 -613 5687 5528 21 0 0 0 chr2 111102288 111102309 -139585545 + AT_rich Low_complexity Low_complexity 1 21 0 190 293 94 28 chr2 111102876 111102943 -139584911 + MIR SINE MIR 128 206 -56 2104 125 0 0 chr2 111102943 111103247 -139584607 + AluSc SINE Alu 1 304 -5 190 293 94 28 chr2 111103247 111103285 -139584569 + MIR SINE MIR 206 240 -22 1896 104 101 0 chr2 111103481 111103759 -139584095 - AluSx SINE Alu -5 307 2 583 171 12 104 chr2 111104217 111104381 -139583473 + MER106B DNA MER1_type 1 149 -910 28 71 0 0 chr2 111104409 111104465 -139583389 + AT_rich Low_complexity Low_complexity 1 56 0 262 98 24 0 chr2 111104465 111104506 -139583348 + MER106B DNA MER1_type 1018 1059 0 21 36 0 0 chr2 111105579 111105607 -139582247 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 111105855 111105878 -139581976 + (CAAT)n Simple_repeat Simple_repeat 3 25 0 559 81 0 23 chr2 111106370 111106456 -139581398 + Alu SINE Alu 226 309 0 2115 110 0 3 chr2 111106904 111107196 -139580658 - AluSc SINE Alu -18 291 1 2049 132 3 3 chr2 111107241 111107552 -139580302 + AluSp SINE Alu 1 311 -2 2685 218 71 5 chr2 111107552 111108315 -139579539 + L1MD1 LINE L1 4514 5326 -820 1426 123 0 37 chr2 111108315 111108558 -139579296 + AluJb SINE Alu 32 265 -47 3855 159 64 25 chr2 111108562 111109360 -139578494 + L1MD1 LINE L1 5414 6242 0 316 177 283 35 chr2 111109764 111109877 -139577977 - Charlie1 DNA MER1_type -1 2760 2620 262 213 113 25 chr2 111109870 111109950 -139577904 - Charlie1 DNA MER1_type -2541 220 134 * 21 36 0 0 chr2 111110475 111110503 -139577351 + GC_rich Low_complexity Low_complexity 1 28 0 26 64 0 0 chr2 111111081 111111128 -139576726 + GC_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr2 111111427 111111448 -139576406 + GC_rich Low_complexity Low_complexity 1 21 0 2155 101 14 3 chr2 111114529 111114826 -139573028 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr2 111115274 111115296 -139572558 + AT_rich Low_complexity Low_complexity 1 22 0 237 226 19 0 chr2 111116919 111116972 -139570882 + L2 LINE L2 3214 3267 -5 2165 102 7 0 chr2 111117213 111117516 -139570338 + AluSx SINE Alu 2 306 -6 498 317 154 13 chr2 111117542 111117769 -139570085 + L3 LINE CR1 1223 1481 -96 2046 92 3 7 chr2 111117941 111118233 -139569621 - AluSc SINE Alu -7 302 12 1936 127 0 3 chr2 111118424 111118738 -139569116 + AluSg SINE Alu 1 313 0 449 307 66 57 chr2 111118877 111119089 -139568765 - MIR SINE MIR -24 238 25 2030 117 3 0 chr2 111119637 111119947 -139567907 + AluSx SINE Alu 1 311 0 199 325 125 38 chr2 111120981 111121141 -139566713 - L2 LINE L2 -455 2859 2686 294 301 59 26 chr2 111121366 111121519 -139566335 + L1MC4a LINE L1 5482 5639 -482 1972 107 16 35 chr2 111121587 111121906 -139565948 + AluSq SINE Alu 1 313 0 209 204 61 0 chr2 111121920 111121969 -139565885 + MER5A DNA MER1_type 61 112 -77 363 284 51 51 chr2 111122015 111122161 -139565693 + L1MC4a LINE L1 5679 5824 -1984 2144 90 0 43 chr2 111122161 111122483 -139565371 + AluSc SINE Alu 1 308 -1 363 284 51 51 chr2 111122483 111122628 -139565226 + L1MC4a LINE L1 5823 5970 -1838 1873 117 43 3 chr2 111122986 111123293 -139564561 + AluSx SINE Alu 1 318 0 750 222 60 12 chr2 111123810 111123977 -139563877 + FAM SINE Alu 1 175 0 2016 123 0 0 chr2 111124000 111124284 -139563570 - AluSx SINE Alu -27 285 2 1308 252 90 21 chr2 111124291 111124767 -139563087 - L1ME3A LINE L1 -5 6165 5657 1946 142 0 0 chr2 111125000 111125332 -139562522 + AluSx SINE Alu 1 332 0 1980 113 7 0 chr2 111125710 111126027 -139561827 + AluSx SINE Alu 1 319 0 486 0 0 0 chr2 111126091 111126145 -139561709 + (TA)n Simple_repeat Simple_repeat 2 55 0 2103 125 0 0 chr2 111126319 111126614 -139561240 + AluSg SINE Alu 1 295 -15 183 184 0 0 chr2 111126958 111126996 -139560858 + (TA)n Simple_repeat Simple_repeat 2 39 0 1194 257 48 36 chr2 111127021 111127478 -139560376 + MER74B LTR ERVL 78 540 -20 2016 101 29 10 chr2 111127572 111127879 -139559975 + AluSq SINE Alu 1 313 0 2232 105 0 0 chr2 111128262 111128568 -139559286 + AluSq SINE Alu 1 306 -7 914 261 59 64 chr2 111128591 111128981 -139558873 + MER21B LTR ERV1 13 400 -463 751 215 50 69 chr2 111129003 111129264 -139558590 + MER21A LTR ERV1 550 805 -126 2060 80 3 28 chr2 111129320 111129643 -139558211 + AluSg SINE Alu 1 316 0 1941 109 3 7 chr2 111129898 111130217 -139557637 + AluSx SINE Alu 1 318 0 2222 116 0 0 chr2 111130628 111130938 -139556916 + AluSg SINE Alu 1 310 0 493 260 72 69 chr2 111130969 111131358 -139556496 + L1MEc LINE L1 1290 1679 -4717 2176 112 0 10 chr2 111131957 111132271 -139555583 - AluSx SINE Alu -1 311 1 2234 158 14 0 chr2 111132675 111133035 -139554819 + MLT1A1 LTR MaLR 1 365 0 1797 222 98 42 chr2 111133117 111133444 -139554410 + L1MC4 LINE L1 7406 7780 -262 2039 115 0 22 chr2 111133444 111133626 -139554228 + AluSx SINE Alu 1 175 -137 3296 195 20 64 chr2 111133626 111134640 -139553214 - LTR5 LTR ERVK 0 969 1 2039 115 0 22 chr2 111134640 111134770 -139553084 + AluSx SINE Alu 175 306 -6 1797 222 98 42 chr2 111134770 111135014 -139552840 + L1MC4 LINE L1 7780 8009 -33 2196 104 7 0 chr2 111136127 111136434 -139551420 + AluSc SINE Alu 1 309 0 2104 113 7 0 chr2 111136505 111136797 -139551057 - AluSx SINE Alu -18 294 1 1999 111 4 0 chr2 111136957 111137257 -139550597 + AluSx SINE Alu 1 301 0 246 108 27 0 chr2 111137851 111137888 -139549966 + L1MB3 LINE L1 5638 5675 -508 985 134 0 0 chr2 111137912 111138086 -139549768 - AluSg SINE Alu 0 311 138 2125 153 25 8 chr2 111138087 111138454 -139549400 + L1MB3 LINE L1 5698 6070 -113 295 184 10 112 chr2 111138453 111138551 -139549303 - L1MC5 LINE L1 -398 7563 7476 * 1964 117 7 0 chr2 111138595 111138878 -139548976 - AluSq SINE Alu -16 297 13 827 126 31 0 chr2 111138882 111139009 -139548845 - AluSg SINE Alu -179 131 1 225 63 0 5 chr2 111139254 111139459 -139548395 + AluY SINE Alu 1 302 0 1749 150 3 48 chr2 111139679 111139993 -139547861 + AluJo SINE Alu 1 300 -12 1522 52 5 0 chr2 111140073 111140264 -139547590 + MER41B LTR ERV1 1 192 -443 2080 113 0 16 chr2 111140264 111140575 -139547279 + AluSx SINE Alu 1 306 -6 350 154 0 0 chr2 111140575 111140627 -139547227 + LTR8 LTR ERV1 526 577 -114 2248 100 0 0 chr2 111140627 111140937 -139546917 + AluY SINE Alu 1 310 -1 1160 98 6 0 chr2 111140940 111141103 -139546751 + AluSg/x SINE Alu 127 290 -20 758 172 0 0 chr2 111141105 111141227 -139546627 + LTR8 LTR ERV1 570 691 0 220 303 0 0 chr2 111141227 111141293 -139546561 - L2 LINE L2 -1098 2216 2151 393 287 140 12 chr2 111142416 111142580 -139545274 + MIR SINE MIR 24 208 -54 796 206 64 36 chr2 111143011 111143230 -139544624 - MER96B DNA MER1_type? -3 414 190 1985 107 0 45 chr2 111143277 111143585 -139544269 - AluSx SINE Alu -18 294 1 2353 92 0 0 chr2 111143935 111144241 -139543613 - AluSc SINE Alu -3 306 1 2163 97 0 3 chr2 111144251 111144549 -139543305 - AluSx SINE Alu -15 297 1 297 296 80 83 chr2 111144911 111145142 -139542712 - L2 LINE L2 -355 2959 2729 2029 114 39 0 chr2 111145142 111145422 -139542432 - AluSq SINE Alu -22 291 1 1993 118 0 0 chr2 111145432 111145703 -139542151 - AluSg SINE Alu -11 299 29 297 296 80 83 chr2 111145703 111145825 -139542029 - L2 LINE L2 -594 2720 2580 2495 88 0 0 chr2 111146170 111146477 -139541377 - AluSx SINE Alu -5 307 1 360 266 127 13 chr2 111147005 111147234 -139540620 - LTR33A LTR ERVL -44 479 225 235 281 50 65 chr2 111147274 111147327 -139540527 - LTR33 LTR ERVL -336 185 133 2169 131 36 28 chr2 111147327 111147687 -139540167 + THE1B LTR MaLR 1 363 -1 235 281 50 65 chr2 111147687 111147772 -139540082 - LTR33 LTR ERVL -388 133 49 457 246 17 0 chr2 111147944 111148063 -139539791 - ERVL LTR ERVL -699 4786 4681 1332 317 61 31 chr2 111148210 111148998 -139538856 + MERVL LTR ERVL 3600 4476 -1124 2388 56 0 11 chr2 111148998 111149284 -139538570 - AluY SINE Alu -7 304 22 1332 317 61 31 chr2 111149284 111149363 -139538491 + MERVL LTR ERVL 4476 4551 -1049 535 277 21 10 chr2 111149384 111149581 -139538273 - ERVL LTR ERVL -2206 3487 3251 354 302 24 8 chr2 111149576 111149702 -139538152 - ERVL LTR ERVL -3707 2057 1930 * 2132 129 0 0 chr2 111149895 111150189 -139537665 + AluSg SINE Alu 1 294 -16 611 325 11 45 chr2 111150349 111150635 -139537219 - ERVL LTR ERVL -4342 1422 1147 191 309 88 0 chr2 111151597 111151665 -139536189 + MIR SINE MIR 72 145 -117 2388 104 0 0 chr2 111151673 111151981 -139535873 - AluSg SINE Alu -2 308 1 212 152 0 43 chr2 111152423 111152469 -139535385 + A-rich Low_complexity Low_complexity 3 46 0 522 222 52 12 chr2 111152630 111152781 -139535073 + MIR SINE MIR 36 199 -9 347 325 106 50 chr2 111152742 111153044 -139534810 + L2 LINE L2 2953 3271 -1 * 2212 125 0 7 chr2 111153117 111153420 -139534434 - AluSx SINE Alu -11 301 1 1689 169 0 7 chr2 111153978 111154250 -139533604 + AluJb SINE Alu 35 304 -8 2078 125 3 0 chr2 111154585 111154873 -139532981 - AluSx SINE Alu -23 289 1 2273 103 7 3 chr2 111155020 111155322 -139532532 + AluSg1 SINE Alu 1 303 -6 882 109 0 44 chr2 111155498 111155635 -139532219 + AluSg SINE Alu 1 131 -179 2135 128 0 16 chr2 111155638 111155942 -139531912 + AluSg SINE Alu 1 299 -11 1999 143 19 13 chr2 111155947 111156255 -139531599 + AluSx SINE Alu 1 310 -2 2510 141 200 28 chr2 111156853 111157394 -139530460 + MER51A LTR ERV1 1 634 0 204 272 198 0 chr2 111157545 111157626 -139530228 + MIR SINE MIR 56 152 -110 925 259 65 34 chr2 111157847 111158098 -139529756 - MLT1J1 LTR MaLR -4 442 173 2381 94 0 3 chr2 111158098 111158397 -139529457 - AluSg SINE Alu -12 298 1 925 259 65 34 chr2 111158397 111158531 -139529323 - MLT1J1 LTR MaLR -273 173 45 417 308 111 10 chr2 111158586 111158794 -139529060 + L2 LINE L2 2286 2514 -800 986 253 119 3 chr2 111158796 111159124 -139528730 + LTR16B LTR ERVL 2 367 -97 1414 118 0 0 chr2 111159134 111159320 -139528534 - AluSq SINE Alu -9 304 119 994 127 63 0 chr2 111159420 111159562 -139528292 - AluSq/x SINE Alu -162 151 1 360 219 0 52 chr2 111159562 111159658 -139528196 + LTR16B LTR ERVL 370 460 -4 325 290 151 88 chr2 111159980 111160218 -139527636 + L2 LINE L2 2934 3186 -86 281 280 68 34 chr2 111160230 111160348 -139527506 - L2 LINE L2 -3 3310 3189 319 307 0 40 chr2 111161073 111161174 -139526680 - HAL1b LINE L1 -46 1302 1206 1831 143 0 0 chr2 111161175 111161440 -139526414 + AluSg SINE Alu 1 265 -45 186 43 0 0 chr2 111161456 111161479 -139526375 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2173 136 0 13 chr2 111161499 111161816 -139526038 + AluSq SINE Alu 1 313 0 2218 108 14 0 chr2 111162195 111162492 -139525362 - AluSp SINE Alu -12 301 1 2005 115 11 4 chr2 111162684 111162963 -139524891 + AluSq SINE Alu 1 281 -32 189 0 0 0 chr2 111162963 111162984 -139524870 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 21 57 0 0 chr2 111165123 111165158 -139522696 + AT_rich Low_complexity Low_complexity 1 35 0 1960 240 75 29 chr2 111165762 111166413 -139521441 + L1 LINE L1 4684 5364 -782 586 215 114 14 chr2 111166652 111166871 -139520983 - HSREP522 Satellite telomeric -262 242 2 375 301 98 15 chr2 111167127 111167167 -139520687 + HSREP522 Satellite telomeric 38 73 -431 180 0 0 0 chr2 111167167 111167187 -139520667 + (TGGGGG)n Simple_repeat Simple_repeat 6 25 0 375 301 98 15 chr2 111167187 111167412 -139520442 + HSREP522 Satellite telomeric 73 325 -179 269 297 8 23 chr2 111168765 111168893 -139518961 + CT-rich Low_complexity Low_complexity 1 126 0 310 339 0 32 chr2 111169395 111169519 -139518335 - L1M4 LINE L1 -2826 3320 3201 220 223 129 41 chr2 111169991 111170152 -139517702 + MIR SINE MIR 9 187 -21 1347 176 9 0 chr2 111170168 111170401 -139517453 + MER41-int LTR ERV1 2120 2354 -3592 1211 105 0 0 chr2 111170437 111170590 -139517264 + AluSq SINE Alu 1 153 -160 894 228 29 52 chr2 111170635 111170942 -139516912 - L1ME LINE L1 -582 5582 5283 1213 266 70 27 chr2 111171044 111171175 -139516679 - HAL1b LINE L1 -224 1124 1000 1484 174 14 44 chr2 111171175 111171468 -139516386 + AluJo SINE Alu 29 312 0 1213 266 70 27 chr2 111171468 111171825 -139516029 - HAL1b LINE L1 -348 1000 615 1255 128 15 30 chr2 111171830 111172033 -139515821 - AluJo SINE Alu -17 295 96 339 266 73 9 chr2 111172041 111172150 -139515704 - HAL1b LINE L1 -741 607 492 2415 105 0 6 chr2 111172255 111172570 -139515284 + AluSq SINE Alu 1 313 0 276 274 78 39 chr2 111174831 111174984 -139512870 + L2 LINE L2 3155 3313 0 1741 212 45 5 chr2 111176034 111176431 -139511423 + MER82 DNA MER2_type 235 647 -6 234 235 85 105 chr2 111176715 111176868 -139510986 + MER5A DNA MER1_type 40 189 0 222 36 0 109 chr2 111177052 111177081 -139510773 + (TAAAA)n Simple_repeat Simple_repeat 2 24 -26 2319 62 6 91 chr2 111177081 111177420 -139510434 + AluY SINE Alu 1 310 -1 222 36 0 109 chr2 111177420 111177445 -139510409 + (TAAAA)n Simple_repeat Simple_repeat 24 50 0 239 309 134 0 chr2 111177482 111177579 -139510275 + MIR SINE MIR 79 188 -74 1154 272 166 22 chr2 111177798 111178435 -139509419 + L1ME3A LINE L1 5431 6161 -9 258 373 9 9 chr2 111178943 111179053 -139508801 - MER5A DNA MER1_type -7 182 73 660 209 61 0 chr2 111179260 111179408 -139508446 + MER53 DNA DNA 20 176 -13 256 227 67 0 chr2 111179501 111179576 -139508278 + MER34 LTR ERV1 24 103 -439 614 223 9 0 chr2 111179680 111179792 -139508062 + FLAM_C SINE Alu 6 118 -25 880 220 118 73 chr2 111179820 111180027 -139507827 + LTR48B LTR ERV1 243 476 -168 2250 112 0 0 chr2 111180027 111180323 -139507531 - AluSx SINE Alu -16 296 1 880 220 118 73 chr2 111180323 111180487 -139507367 + LTR48B LTR ERV1 476 631 -13 2131 113 7 3 chr2 111180969 111181260 -139506594 - AluSx SINE Alu -20 292 1 2280 103 0 0 chr2 111181264 111181555 -139506299 - AluSg1 SINE Alu -16 293 3 2208 108 3 3 chr2 111181557 111181852 -139506002 - AluSx SINE Alu -17 295 1 25 0 0 0 chr2 111181860 111181885 -139505969 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr2 111181885 111181905 -139505949 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2150 108 3 3 chr2 111181905 111182191 -139505663 - AluSx SINE Alu -26 286 1 767 284 94 31 chr2 111182191 111182511 -139505343 - L1MC/D LINE L1 -1984 5824 5485 2321 89 0 0 chr2 111183338 111183631 -139504223 - AluSg SINE Alu -17 293 1 1736 177 35 3 chr2 111183639 111183921 -139503933 - AluJb SINE Alu -21 291 1 812 196 39 0 chr2 111184310 111184489 -139503365 - L1MD3 LINE L1 -1060 6935 6750 430 293 184 0 chr2 111184500 111184756 -139503098 - L1MC4a LINE L1 -1220 6588 6286 1422 140 0 18 chr2 111184760 111184981 -139502873 - AluJb SINE Alu -11 301 85 2402 87 0 16 chr2 111185514 111185826 -139502028 + AluSc SINE Alu 2 308 -1 393 22 0 0 chr2 111185895 111185941 -139501913 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 2154 103 10 0 chr2 111185941 111186225 -139501629 - AluSq SINE Alu -23 290 1 1745 99 11 82 chr2 111187100 111187472 -139500382 - MER4A LTR ERV1 0 664 261 612 141 0 10 chr2 111187472 111187571 -139500283 - MER4A LTR ERV1 -566 98 1 2385 90 0 3 chr2 111188800 111189100 -139498754 - AluSg SINE Alu -11 299 1 913 241 24 21 chr2 111189200 111189490 -139498364 + L1MB7 LINE L1 5878 6168 -16 1278 96 0 0 chr2 111189824 111189991 -139497863 - AluSq SINE Alu 0 313 147 1075 85 0 125 chr2 111189991 111190191 -139497663 + MER4B LTR ERV1 115 289 -321 1862 119 73 7 chr2 111190191 111190477 -139497377 - AluSx SINE Alu -7 305 1 1426 148 49 46 chr2 111190484 111190768 -139497086 + THE1B LTR MaLR 80 364 0 1055 133 77 11 chr2 111190768 111190948 -139496906 + MER4A LTR ERV1 473 664 0 533 171 0 0 chr2 111190948 111191036 -139496818 - Tigger1 DNA MER2_type -2330 88 1 2046 130 49 0 chr2 111191078 111191425 -139496429 + MSTA LTR MaLR 1 364 -64 922 97 0 0 chr2 111191425 111191538 -139496316 - AluSc SINE Alu -14 295 183 374 132 171 0 chr2 111191539 111191611 -139496243 + MER46A DNA MER2_type 139 223 -13 237 167 0 0 chr2 111191611 111191653 -139496201 - MSTA LTR MaLR 0 428 387 871 135 0 0 chr2 111191667 111191800 -139496054 - MER46A DNA MER2_type -103 133 1 351 0 0 0 chr2 111191820 111191859 -139495995 + (TG)n Simple_repeat Simple_repeat 2 40 0 1993 224 57 7 chr2 111191863 111192497 -139495357 - L1MDb LINE L1 -4938 1602 951 272 353 58 6 chr2 111192754 111192927 -139494927 - L1MDb LINE L1 -6082 458 277 220 273 18 0 chr2 111192928 111192983 -139494871 + CT-rich Low_complexity Low_complexity 2 57 0 2132 125 0 3 chr2 111192985 111193281 -139494573 - AluSg SINE Alu -15 295 1 1677 242 111 0 chr2 111193281 111193805 -139494049 - L1M4 LINE L1 -1073 5073 4492 2126 144 0 0 chr2 111193805 111194090 -139493764 - AluJo SINE Alu -21 291 7 283 248 149 51 chr2 111394197 111394411 -139293443 - L1M4 LINE L1 -942 5204 4970 206 317 135 10 chr2 111394415 111394519 -139293335 + MIR3 SINE MIR 62 178 -30 285 29 0 0 chr2 111395014 111395048 -139292806 + (CA)n Simple_repeat Simple_repeat 2 35 0 890 186 81 51 chr2 111395482 111395557 -139292297 + MLT2D LTR ERVL 6 77 -337 2105 106 0 0 chr2 111395557 111395839 -139292015 + AluSg SINE Alu 1 282 -28 252 0 0 0 chr2 111395839 111395867 -139291987 + (TTAA)n Simple_repeat Simple_repeat 2 29 0 890 186 81 51 chr2 111395867 111396026 -139291828 + MLT2D LTR ERVL 76 248 -166 1493 139 34 27 chr2 111396701 111396885 -139290969 - AluJo SINE Alu 0 312 124 207 0 0 0 chr2 111396885 111396908 -139290946 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1493 139 34 27 chr2 111396908 111397018 -139290836 - AluJo SINE Alu -188 124 16 4357 154 18 18 chr2 111397581 111398353 -139289501 - L1MB4 LINE L1 -51 6129 5358 315 318 23 11 chr2 111400127 111400303 -139287551 + (CA)n Simple_repeat Simple_repeat 1 178 0 240 35 0 0 chr2 111401253 111401282 -139286572 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2131 94 3 3 chr2 111401284 111401571 -139286283 - AluSg SINE Alu -23 287 1 221 350 75 30 chr2 111401884 111402084 -139285770 + MIR SINE MIR 8 216 -46 837 379 61 13 chr2 111402918 111403390 -139284464 + L3 LINE CR1 60 554 -1023 228 245 19 0 chr2 111403640 111403693 -139284161 + L3 LINE CR1 595 648 -929 859 83 0 0 chr2 111403708 111403816 -139284038 + AluSc SINE Alu 1 108 -201 275 176 0 88 chr2 111403818 111403886 -139283968 + L3 LINE CR1 659 720 -857 1714 143 13 127 chr2 111404570 111404963 -139282891 - MER7A DNA MER2_type 0 346 1 468 242 10 0 chr2 111405181 111405225 -139282629 + MER3 DNA MER1_type 4 48 -161 608 211 62 0 chr2 111405225 111405353 -139282501 - MER3 DNA MER1_type 0 209 74 604 256 34 23 chr2 111405481 111405657 -139282197 - MER5B DNA MER1_type 0 178 1 209 376 0 11 chr2 111406112 111406205 -139281649 - MIR3 SINE MIR -6 202 111 408 283 84 40 chr2 111406540 111406791 -139281063 - L2 LINE L2 -44 3269 3008 225 364 131 0 chr2 111407235 111407334 -139280520 + L2 LINE L2 3161 3272 0 249 236 130 41 chr2 111409189 111409312 -139278542 - MER103 DNA DNA -18 148 15 425 259 54 48 chr2 111410073 111410239 -139277615 - MIR3 SINE MIR -7 201 35 3832 141 45 73 chr2 111411938 111412677 -139275177 - LTR62 LTR ERVK -1 718 1 637 236 43 0 chr2 111413079 111413240 -139274614 + MER5A DNA MER1_type 3 170 -19 486 228 89 15 chr2 111413828 111413982 -139273872 + MLT2B3 LTR ERVL 220 554 0 2453 179 69 27 chr2 111414780 111415329 -139272525 - L1MB1 LINE L1 -1 6167 5596 1260 237 44 48 chr2 111415589 111415721 -139272133 + MLT1C LTR MaLR 54 185 -282 1267 189 36 29 chr2 111415721 111416024 -139271830 + AluJo SINE Alu 1 305 0 1260 237 44 48 chr2 111416024 111416045 -139271809 + MLT1C LTR MaLR 185 205 -262 275 0 29 0 chr2 111416045 111416080 -139271774 + (TC)n Simple_repeat Simple_repeat 1 36 0 * 387 0 0 0 chr2 111416079 111416122 -139271732 + (CA)n Simple_repeat Simple_repeat 1 43 0 1260 237 44 48 chr2 111416080 111416378 -139271476 + MLT1C LTR MaLR 205 464 -3 323 317 67 36 chr2 111416701 111416925 -139270929 + MIR SINE MIR 20 250 -12 247 133 0 5 chr2 111417312 111417364 -139270490 + Alu SINE Alu 33 77 -89 1886 175 33 41 chr2 111419752 111420056 -139267798 - MER89 LTR ERV1 0 559 160 1972 121 0 3 chr2 111420056 111420364 -139267490 + AluSx SINE Alu 1 307 0 1886 175 33 41 chr2 111420364 111420523 -139267331 - MER89 LTR ERV1 -399 160 1 648 237 45 96 chr2 111421204 111421504 -139266350 + MER102a DNA MER1_type 1 284 -1133 1632 211 37 8 chr2 111421504 111421855 -139265999 + MLT1A1 LTR MaLR 2 362 -3 648 237 45 96 chr2 111421855 111421887 -139265967 + MER102a DNA MER1_type 284 316 -14 266 254 28 51 chr2 111422270 111422350 -139265504 + MIR3 SINE MIR 95 175 -33 891 314 41 9 chr2 111422400 111422719 -139265135 - MLT1I LTR MaLR 0 409 81 2261 172 8 0 chr2 111422752 111423113 -139264741 - MLT1A1 LTR MaLR -1 364 1 184 213 106 21 chr2 111423981 111424028 -139263826 + L2 LINE L2 3246 3296 -17 430 322 8 0 chr2 111424279 111424400 -139263454 - MIR SINE MIR -15 247 126 279 138 17 0 chr2 111425968 111426026 -139261828 + L1ME4a LINE L1 6060 6118 -3 2514 39 3 3 chr2 111426037 111426343 -139261511 + AluY SINE Alu 1 306 -5 841 76 35 48 chr2 111427296 111427441 -139260413 + FLAM_C SINE Alu 1 143 0 2798 79 0 3 chr2 111427519 111427875 -139259979 - THE1A LTR MaLR 0 355 1 490 289 72 53 chr2 111428125 111428502 -139259352 - L2 LINE L2 -94 3219 2836 575 202 98 20 chr2 111428994 111429170 -139258684 - MIR SINE MIR -60 202 3 346 148 49 0 chr2 111429516 111429597 -139258257 + L1MB4 LINE L1 6096 6180 0 751 242 28 19 chr2 111429601 111429836 -139258018 - L1M2 LINE L1 -4264 2163 1734 1556 175 0 32 chr2 111429860 111430174 -139257680 - AluJo SINE Alu -8 304 1 1726 215 168 17 chr2 111430175 111430692 -139257162 - L1MD2 LINE L1 -7 6352 5758 210 118 0 0 chr2 111430941 111430975 -139256879 + (CA)n Simple_repeat Simple_repeat 1 34 0 267 253 13 0 chr2 111432037 111432116 -139255738 + L1ME2 LINE L1 49 128 -6268 * 1867 220 40 17 chr2 111432107 111432749 -139255105 + L1ME2 LINE L1 4315 5898 -337 2010 108 13 16 chr2 111432750 111433055 -139254799 + AluSx SINE Alu 9 312 0 216 0 0 0 chr2 111433061 111433085 -139254769 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 944 199 0 0 chr2 111433085 111433256 -139254598 + AluJb SINE Alu 130 300 -12 575 255 7 0 chr2 111433257 111433410 -139254444 + L1ME2 LINE L1 5895 6048 -185 * 6664 231 50 44 chr2 111433395 111434034 -139253820 + L1MC3 LINE L1 2983 3617 -2529 1904 187 3 55 chr2 111434034 111434419 -139253435 - MLT1A1 LTR MaLR 0 365 1 6664 231 50 44 chr2 111434419 111437510 -139250344 + L1MC3 LINE L1 3617 5363 -783 3262 153 138 102 chr2 111439219 111439595 -139248259 + L1MC3 LINE L1 6726 7087 -698 325 286 11 0 chr2 111439595 111439686 -139248168 + MLT1F1 LTR MaLR 34 125 -442 3262 153 138 102 chr2 111439686 111440242 -139247612 + L1MC3 LINE L1 7087 7785 0 317 237 21 32 chr2 111440251 111440344 -139247510 + CT-rich Low_complexity Low_complexity 5 96 0 1556 196 163 5 chr2 111440359 111440727 -139247127 - MSTB LTR MaLR 0 426 1 184 342 54 18 chr2 111440844 111440955 -139246899 - MIR3 SINE MIR -88 120 6 263 280 42 42 chr2 111441163 111441281 -139246573 - MIR SINE MIR -40 222 105 220 300 215 8 chr2 111442210 111442340 -139245514 + MIR3 SINE MIR 41 197 -11 186 244 0 0 chr2 111442505 111442546 -139245308 - L2 LINE L2 -9 3304 3264 2207 197 45 7 chr2 111443713 111444154 -139243700 - MLT1C LTR MaLR -8 459 2 192 300 11 56 chr2 111444570 111444660 -139243194 + MIR SINE MIR 113 198 -64 357 265 8 30 chr2 111445654 111445786 -139242068 + CT-rich Low_complexity Low_complexity 2 130 0 2303 104 0 0 chr2 111447409 111447707 -139240147 + AluSx SINE Alu 1 298 -14 415 250 58 0 chr2 111449114 111449234 -139238620 + L2 LINE L2 3145 3271 -1 2642 131 36 0 chr2 111449250 111449663 -139238191 + MSTA LTR MaLR 1 428 0 951 164 29 0 chr2 111450672 111450843 -139237011 - MER5A DNA MER1_type 0 189 14 219 216 20 0 chr2 111451751 111451802 -139236052 - MER5B DNA MER1_type -61 117 66 355 283 10 0 chr2 111451888 111451987 -139235867 - MIR SINE MIR -70 138 39 192 179 0 0 chr2 111453409 111453448 -139234406 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 213 250 88 0 chr2 111453991 111454059 -139233795 + MIR SINE MIR 119 192 -70 1061 158 40 0 chr2 111454301 111454503 -139233351 - L1MA5 LINE L1 0 6300 6091 1196 146 25 0 chr2 111454503 111454702 -139233152 - Tigger1 DNA MER2_type -6 2412 2209 3504 185 20 29 chr2 111454715 111455926 -139231928 - L1MDb LINE L1 -3178 3670 2473 294 288 118 29 chr2 111456477 111456591 -139231263 - MIR SINE MIR -73 189 54 2310 93 17 3 chr2 111456591 111456891 -139230963 + AluY SINE Alu 1 304 -7 294 288 118 29 chr2 111456891 111456946 -139230908 - MIR SINE MIR -208 54 5 180 0 0 0 chr2 111457667 111457687 -139230167 + (A)n Simple_repeat Simple_repeat 1 20 0 2199 243 167 13 chr2 111458127 111459041 -139228813 - L1ME3A LINE L1 -5 6867 5816 826 200 260 5 chr2 111459042 111459242 -139228612 - AluJo SINE Alu -59 253 3 1248 260 75 35 chr2 111459242 111459991 -139227863 - L1ME3A LINE L1 -977 5871 5048 3152 216 80 26 chr2 111460094 111461145 -139226709 - L1MDb LINE L1 -5074 1777 443 236 213 213 11 chr2 111462143 111462237 -139225617 + MIR SINE MIR 33 145 -63 256 318 32 3 chr2 111462396 111462553 -139225301 - MIR SINE MIR -50 212 11 296 321 30 15 chr2 111462815 111462946 -139224908 - MIR SINE MIR -70 192 60 5749 249 23 23 chr2 111463082 111464890 -139222964 - L1MDa LINE L1 -1887 4653 2846 341 159 95 0 chr2 111464898 111464961 -139222893 - MER21A LTR ERV1 -6 925 857 409 147 59 0 chr2 111465301 111465369 -139222485 + MER21A LTR ERV1 854 925 -6 275 250 69 76 chr2 111465377 111465521 -139222333 + L1M4 LINE L1 2452 2594 -3552 2723 137 72 32 chr2 111465530 111466204 -139221650 - MER21A LTR ERV1 -116 815 1 1186 208 19 30 chr2 111466214 111466706 -139221148 - L1MDa LINE L1 -3710 2830 2347 218 171 0 0 chr2 111466892 111466927 -139220927 + (CTG)n Simple_repeat Simple_repeat 1 35 0 838 268 35 31 chr2 111467001 111467318 -139220536 - L1MDa LINE L1 -6205 335 18 225 292 0 15 chr2 111469192 111469257 -139218597 + G-rich Low_complexity Low_complexity 2 65 0 243 88 0 0 chr2 111469357 111469391 -139218463 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 295 252 48 19 chr2 111470428 111470531 -139217323 + MIR SINE MIR 36 141 -67 321 239 192 0 chr2 111470555 111470685 -139217169 - MER117 DNA MER1_type -7 190 36 194 256 0 0 chr2 111470709 111470752 -139217102 + MIR3 SINE MIR 158 200 -8 180 0 0 0 chr2 111471361 111471381 -139216473 + (CAGCT)n Simple_repeat Simple_repeat 4 23 0 348 162 0 29 chr2 111472328 111472396 -139215458 + MLT1K LTR MaLR 510 575 -13 281 233 0 35 chr2 111472440 111472526 -139215328 - MIR SINE MIR -63 199 117 181 336 77 7 chr2 111473559 111473702 -139214152 + MIR SINE MIR 109 261 -1 195 26 103 0 chr2 111473882 111473921 -139213933 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 281 323 23 8 chr2 111476798 111476928 -139210926 - MIR SINE MIR -78 184 53 342 0 0 0 chr2 111478808 111478846 -139209008 + (CA)n Simple_repeat Simple_repeat 2 39 0 1156 191 14 5 chr2 111479010 111479230 -139208624 - MER58A DNA MER1_type 0 224 3 250 265 26 60 chr2 111479471 111479588 -139208266 + MER103 DNA DNA 1 113 -53 297 51 0 0 chr2 111480866 111480905 -139206949 + (TG)n Simple_repeat Simple_repeat 2 40 0 494 256 61 15 chr2 111481616 111481790 -139206064 + MIR SINE MIR 3 183 -65 194 240 0 0 chr2 111482189 111482239 -139205615 + MIR SINE MIR 89 138 -124 297 294 86 12 chr2 111482289 111482452 -139205402 - MIR SINE MIR -71 191 17 2023 177 110 11 chr2 111484356 111484803 -139203051 - MLT1D LTR MaLR -8 497 7 285 29 0 0 chr2 111485721 111485755 -139202099 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 439 219 9 38 chr2 111486396 111486501 -139201353 + MER81 DNA DNA 11 112 -2 310 42 21 21 chr2 111486964 111487012 -139200842 + L1PA3 LINE L1 6103 6150 -5 2574 106 19 6 chr2 111487227 111487586 -139200268 - THE1B LTR MaLR 0 364 1 507 153 0 0 chr2 111487945 111488030 -139199824 - L1ME LINE L1 -354 5879 5795 506 135 22 22 chr2 111488036 111488125 -139199729 - Tigger7 DNA MER2_type 0 2491 2403 1446 209 4 4 chr2 111488151 111488419 -139199435 - Tigger7 DNA MER2_type -465 268 1 1347 218 71 66 chr2 111488419 111489118 -139198736 - L1ME LINE L1 -443 5790 5070 227 286 92 0 chr2 111489128 111489226 -139198628 - L1ME LINE L1 -3266 2949 2843 1349 289 85 59 chr2 111489251 111490342 -139197512 - L1ME LINE L1 -4529 1867 748 714 253 182 24 chr2 111490641 111490937 -139196917 - L1ME LINE L1 -5722 483 141 198 128 0 0 chr2 111492285 111492324 -139195530 + (TG)n Simple_repeat Simple_repeat 2 40 0 1760 178 158 22 chr2 111492656 111493022 -139194832 + MSTC LTR MaLR 1 416 -12 1851 193 35 3 chr2 111493586 111493934 -139193920 - MLT1A1 LTR MaLR 0 365 7 453 260 66 84 chr2 111494243 111494360 -139193494 + MIR SINE MIR 28 146 -116 2167 82 65 3 chr2 111494360 111494651 -139193203 + AluSx SINE Alu 1 309 -3 3251 88 5 2 chr2 111494660 111495104 -139192750 + L1PA13 LINE L1 5716 6160 -3 453 260 66 84 chr2 111495104 111495203 -139192651 + MIR SINE MIR 154 250 -12 290 402 43 4 chr2 111495801 111496035 -139191819 - MIR SINE MIR 0 262 20 212 128 64 0 chr2 111500321 111500368 -139187486 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 224 0 65 0 chr2 111502284 111502315 -139185539 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 449 331 24 0 chr2 111503572 111503738 -139184116 + MIR SINE MIR 81 250 -12 362 235 12 12 chr2 111504844 111504929 -139182925 - L2 LINE L2 -3 3310 3226 306 336 24 16 chr2 111505229 111505354 -139182500 + L3 LINE CR1 439 564 -1013 375 282 39 0 chr2 111505594 111505697 -139182157 + MIR SINE MIR 34 140 -68 360 352 5 51 chr2 111505676 111505872 -139181982 + L3 LINE CR1 639 825 -752 * 1839 108 3 69 chr2 111505894 111506231 -139181623 + AluSq SINE Alu 1 317 0 250 346 77 0 chr2 111506594 111506698 -139181156 + L3 LINE CR1 901 1012 -565 1629 163 60 3 chr2 111506856 111507138 -139180716 - AluJb SINE Alu -14 298 1 362 242 35 13 chr2 111507454 111507612 -139180242 + L1ME4a LINE L1 5310 5480 -879 308 350 12 43 chr2 111507654 111507817 -139180037 + MIR SINE MIR 35 192 -70 366 218 129 75 chr2 111507980 111508127 -139179727 + L1ME4a LINE L1 5894 6048 -73 304 328 9 9 chr2 111508250 111508366 -139179488 + L3 LINE CR1 1161 1276 -301 731 125 0 16 chr2 111508605 111508733 -139179121 + (TTCC)n Simple_repeat Simple_repeat 4 129 0 315 298 145 0 chr2 111509217 111509348 -139178506 - MIR SINE MIR -62 200 51 245 226 83 48 chr2 111509697 111509781 -139178073 + MLT1K LTR MaLR 467 553 -35 285 109 0 0 chr2 111511206 111511252 -139176602 + (GA)n Simple_repeat Simple_repeat 1 46 0 781 299 23 30 chr2 111511933 111512197 -139175657 - MIR SINE MIR 0 262 1 492 277 53 48 chr2 111512374 111512580 -139175274 + MIR SINE MIR 5 211 -51 204 279 38 51 chr2 111512952 111513031 -139174823 + MIR SINE MIR 55 132 -76 2537 108 88 10 chr2 111513183 111513580 -139174274 - MSTA LTR MaLR 0 428 1 10077 154 18 4 chr2 111513580 111515208 -139172646 - MSTA-int LTR MaLR 0 1651 1 2330 134 86 10 chr2 111515208 111515604 -139172250 - MSTA LTR MaLR 0 428 3 300 271 159 54 chr2 111515620 111515878 -139171976 + L2 LINE L2 3029 3313 0 1392 202 87 48 chr2 111516044 111516479 -139171375 + L1ME2 LINE L1 5707 6158 -6 3034 99 7 7 chr2 111516490 111516936 -139170918 - L1PA10 LINE L1 0 6168 5723 1926 204 35 0 chr2 111517259 111517655 -139170199 + L1ME LINE L1 3 412 -6128 1823 176 29 41 chr2 111517664 111518078 -139169776 + L1ME LINE L1 1905 2313 -4227 2912 206 69 55 chr2 111518082 111518942 -139168912 + L1ME LINE L1 4293 5164 -1376 773 256 53 108 chr2 111519016 111519505 -139168349 + MLT1H1 LTR MaLR 45 506 -49 1749 222 84 24 chr2 111519529 111519702 -139168152 + L1ME LINE L1 5193 5354 -1210 2004 112 3 3 chr2 111519702 111520012 -139167842 + AluSx SINE Alu 1 310 0 1749 222 84 24 chr2 111520012 111520540 -139167314 + L1ME LINE L1 5354 5939 -625 211 250 0 69 chr2 111522358 111522430 -139165424 + MIR SINE MIR 118 184 -78 21 0 0 0 chr2 111522542 111522563 -139165291 + AT_rich Low_complexity Low_complexity 1 21 0 234 269 0 45 chr2 111524866 111524933 -139162921 - MIR SINE MIR -91 117 54 4419 174 26 14 chr2 111525477 111525626 -139162228 - L1MB2 LINE L1 -39 6132 5986 2001 116 18 0 chr2 111525626 111525911 -139161943 - AluSx SINE Alu -21 291 2 4419 174 26 14 chr2 111525911 111526614 -139161240 - L1MB2 LINE L1 -185 5986 5270 343 274 44 9 chr2 111527608 111527721 -139160133 - MIR SINE MIR -73 189 73 717 89 0 0 chr2 111527769 111527859 -139159995 + FRAM SINE Alu 52 141 -35 241 226 108 39 chr2 111527998 111528100 -139159754 - Charlie8 DNA MER1_type -2236 181 73 1103 120 0 0 chr2 111534132 111534290 -139153564 + AluJo SINE Alu 1 158 -154 234 200 22 0 chr2 111534290 111534335 -139153519 + Alu SINE Alu 107 152 -14 226 333 56 19 chr2 111534879 111534987 -139152867 - MIR SINE MIR -59 149 38 267 267 31 47 chr2 111536160 111536351 -139151503 + L1M4 LINE L1 5042 5229 -917 225 314 0 58 chr2 111536445 111536566 -139151288 + L1P LINE L1 5258 5371 -785 210 294 15 15 chr2 111537621 111537689 -139150165 - MIR SINE MIR -10 252 185 1378 140 36 0 chr2 111539077 111539299 -139148555 + MER30 DNA MER1_type 1 230 0 533 234 32 110 chr2 111541094 111541262 -139146592 - Charlie8 DNA MER1_type -2008 409 270 581 248 87 0 chr2 111541262 111541423 -139146431 + MER96 DNA MER1_type 1 175 0 533 234 32 110 chr2 111541423 111541536 -139146318 - Charlie8 DNA MER1_type -2147 270 150 198 0 0 0 chr2 111541705 111541727 -139146127 + (A)n Simple_repeat Simple_repeat 1 22 0 2031 125 0 0 chr2 111541998 111542285 -139145569 + AluSx SINE Alu 3 289 -23 240 236 89 41 chr2 111542385 111542508 -139145346 + L1ME3A LINE L1 2178 2306 -3840 277 274 96 73 chr2 111542535 111543056 -139144798 + L1ME3A LINE L1 2387 2919 -3227 1194 168 42 0 chr2 111543058 111543272 -139144582 + AluJb SINE Alu 73 295 -17 831 306 27 1 chr2 111543346 111543725 -139144129 + L1ME3A LINE L1 3964 4361 -1785 306 246 5 144 chr2 111543847 111543954 -139143900 + L1ME3A LINE L1 4456 4520 -1626 2343 79 0 0 chr2 111543954 111544257 -139143597 + AluSg SINE Alu 1 303 -7 306 246 5 144 chr2 111544257 111544364 -139143490 + L1ME3A LINE L1 4520 4640 -1506 491 299 62 51 chr2 111544369 111544937 -139142917 + L1ME3A LINE L1 4733 5306 -840 1168 149 19 212 chr2 111545049 111545473 -139142381 - MLT2D LTR ERVL 0 414 73 312 335 58 10 chr2 111545639 111545845 -139142009 + L1ME3A LINE L1 5683 5898 -272 738 199 8 0 chr2 111547859 111547990 -139139864 - FRAM SINE Alu -44 132 1 1416 231 115 62 chr2 111548156 111548671 -139139183 - MLT1F LTR MaLR 0 542 1 2036 186 17 3 chr2 111549022 111549382 -139138472 - MLT1A1 LTR MaLR 0 365 1 1069 85 0 0 chr2 111549518 111549648 -139138206 + AluSg SINE Alu 2 131 -179 2131 108 10 7 chr2 111549651 111549946 -139137908 + AluSg SINE Alu 1 296 -14 233 240 67 13 chr2 111549950 111550025 -139137829 + MIR SINE MIR 51 129 -79 4070 140 17 3 chr2 111550427 111551061 -139136793 - L1PA15 LINE L1 0 6165 5523 438 186 58 138 chr2 111552888 111553076 -139134778 + MER104 DNA Tc2 3 175 -5 584 165 92 9 chr2 111553664 111553773 -139134081 - MER103 DNA DNA -46 120 3 347 278 231 28 chr2 111555236 111555452 -139132402 + Charlie8 DNA MER1_type 17 276 -2141 260 318 167 0 chr2 111555584 111555710 -139132144 + MER91A DNA MER1_type 50 196 0 333 294 10 0 chr2 111555986 111556088 -139131766 - MIR SINE MIR -74 188 86 262 283 20 10 chr2 111556556 111556655 -139131199 + MIR SINE MIR 37 136 -72 1932 112 7 34 chr2 111557431 111557725 -139130129 + AluSx SINE Alu 20 305 -7 209 206 15 59 chr2 111558194 111558262 -139129592 + GA-rich Low_complexity Low_complexity 3 67 0 185 333 0 22 chr2 111558467 111558557 -139129297 - MIR SINE MIR -123 139 52 195 213 21 0 chr2 111559211 111559258 -139128596 - MIR3 SINE MIR -51 157 110 276 188 75 25 chr2 111559488 111559568 -139128286 - L1ME4a LINE L1 -21 6100 6017 1906 147 127 19 chr2 111559642 111560003 -139127851 + MER21A LTR ERV1 1 400 -531 1660 148 49 11 chr2 111560005 111560268 -139127586 + AluJb SINE Alu 1 273 -39 674 145 22 28 chr2 111560294 111560473 -139127381 + GA-rich Low_complexity Low_complexity 2 179 0 2647 149 51 61 chr2 111560500 111561045 -139126809 + MER21A LTR ERV1 390 929 -2 471 115 0 115 chr2 111562407 111562511 -139125343 + MER53 DNA DNA 4 95 -94 * 490 136 0 11 chr2 111562433 111562521 -139125333 - MER53 DNA DNA -8 181 95 344 175 196 0 chr2 111562591 111562688 -139125166 - MIR SINE MIR -119 143 28 345 289 25 33 chr2 111565301 111565422 -139122432 - L3b LINE CR1 -284 1299 1180 1820 157 49 94 chr2 111566051 111566096 -139121758 - MSTB LTR MaLR 0 426 381 1450 72 0 0 chr2 111566096 111566277 -139121577 - AluY SINE Alu -1 310 130 1820 157 49 94 chr2 111566277 111566349 -139121505 - MSTB LTR MaLR -45 381 307 2039 128 16 3 chr2 111566349 111566653 -139121201 + AluSg1 SINE Alu 2 309 0 1820 157 49 94 chr2 111566653 111566980 -139120874 - MSTB LTR MaLR -119 307 1 2480 91 0 0 chr2 111567368 111567675 -139120179 - AluSg SINE Alu -3 307 1 222 242 32 0 chr2 111567972 111568034 -139119820 + L2 LINE L2 3235 3298 -15 1617 177 34 12 chr2 111568453 111568781 -139119073 - L1MB8 LINE L1 -11 6167 5833 2066 154 5 46 chr2 111568785 111569174 -139118680 - L1MB8 LINE L1 -424 5754 5382 296 284 34 0 chr2 111569177 111569265 -139118589 + MER103 DNA DNA 75 165 -1 180 0 0 0 chr2 111569438 111569458 -139118396 + (TAA)n Simple_repeat Simple_repeat 3 22 0 350 240 0 0 chr2 111569461 111569536 -139118318 + MER34 LTR ERV1 22 96 -446 642 226 153 45 chr2 111569545 111569795 -139118059 + LTR29 LTR ERV1 142 604 -183 3621 148 78 11 chr2 111570397 111571025 -139116829 - LTR51 LTR ERV1 -1 670 1 2567 236 42 44 chr2 111571101 111572374 -139115480 + L1ME1 LINE L1 4737 5998 -168 529 263 33 0 chr2 111572441 111572593 -139115261 + L1MA10 LINE L1 6169 6325 -9 307 228 10 50 chr2 111572607 111572708 -139115146 + L1MC5 LINE L1 7704 7800 -161 22 35 0 0 chr2 111573645 111573674 -139114180 + AT_rich Low_complexity Low_complexity 1 29 0 1548 238 77 41 chr2 111573705 111574443 -139113411 + L1M4 LINE L1 30 815 -5727 3239 139 39 14 chr2 111574443 111575043 -139112811 + MER4B LTR ERV1 1 779 0 2741 185 44 28 chr2 111575043 111575718 -139112136 + L1M4 LINE L1 812 1497 -5045 8097 27 0 0 chr2 111575725 111576659 -139111195 - L1P LINE L1 -1263 4883 3950 1725 104 115 0 chr2 111576814 111577074 -139110780 - AluSc SINE Alu -19 290 1 237 296 62 0 chr2 111577240 111577321 -139110533 - MIR SINE MIR -114 148 63 209 289 89 52 chr2 111577514 111577649 -139110205 + L2 LINE L2 2670 2809 -505 25 31 0 0 chr2 111578084 111578116 -139109738 + AT_rich Low_complexity Low_complexity 1 32 0 2187 71 0 18 chr2 111578755 111579035 -139108819 + AluY SINE Alu 1 275 -36 421 145 0 0 chr2 111579135 111579197 -139108657 - AluS SINE Alu -255 63 2 732 133 7 74 chr2 111579982 111580117 -139107737 + AluJ SINE Alu 22 147 -165 566 172 21 0 chr2 111580129 111580222 -139107632 - AluJ/FLAM SINE Alu -213 99 5 1663 233 101 0 chr2 111580734 111581171 -139106683 - L1ME1 LINE L1 -5 6161 5681 479 167 0 29 chr2 111581171 111581273 -139106581 - L1MB8 LINE L1 -1 6177 6079 960 185 5 11 chr2 111581406 111581590 -139106264 + AluJ SINE Alu 129 311 -1 1916 154 4 0 chr2 111581602 111581881 -139105973 + AluSx SINE Alu 1 280 -32 1806 202 56 52 chr2 111581890 111582256 -139105598 + L1ME2 LINE L1 5649 6019 -145 2169 107 31 0 chr2 111582256 111582545 -139105309 + AluSg SINE Alu 1 298 -12 1806 202 56 52 chr2 111582545 111582692 -139105162 + L1ME2 LINE L1 6019 6164 0 2315 95 10 3 chr2 111582725 111583029 -139104825 + AluSq SINE Alu 1 306 -7 214 234 26 78 chr2 111583590 111583667 -139104187 + MIR SINE MIR 154 226 -36 8034 11 0 2 chr2 111584062 111585263 -139102591 - L1PA2 LINE L1 0 6155 4953 1212 211 144 23 chr2 111585364 111585785 -139102069 - MLT1E LTR MaLR -7 577 67 498 247 84 28 chr2 111586378 111586460 -139101394 + MER112 DNA MER1_type 67 143 -117 1251 222 3 50 chr2 111586460 111586780 -139101074 - AluJo SINE Alu -7 305 1 498 247 84 28 chr2 111586780 111586875 -139100979 + MER112 DNA MER1_type 143 254 -6 426 222 108 78 chr2 111587304 111587664 -139100190 - L1MEd LINE L1 -4860 1398 1010 2372 94 3 3 chr2 111587664 111587971 -139099883 - AluSq SINE Alu -6 307 1 426 222 108 78 chr2 111587971 111588049 -139099805 - L1MEd LINE L1 -5248 1010 936 332 154 77 0 chr2 111588779 111588844 -139099010 + L1MC5 LINE L1 7269 7338 -623 462 219 238 0 chr2 111588844 111588995 -139098859 + MER5A DNA MER1_type 2 188 -1 21 0 0 0 chr2 111589290 111589311 -139098543 + AT_rich Low_complexity Low_complexity 1 21 0 541 240 176 20 chr2 111590368 111590608 -139097246 + MIR SINE MIR 5 262 0 703 170 41 35 chr2 111590618 111590789 -139097065 + MER104 DNA Tc2 7 178 -2 22 80 0 0 chr2 111592268 111592318 -139095536 + AT_rich Low_complexity Low_complexity 1 50 0 345 249 144 62 chr2 111592336 111592862 -139094992 - L1ME4a LINE L1 -22 6099 5536 23 33 0 0 chr2 111594136 111594166 -139093688 + AT_rich Low_complexity Low_complexity 1 30 0 706 177 0 0 chr2 111594527 111594651 -139093203 - AluSg/x SINE Alu -1 311 188 245 268 0 56 chr2 111594669 111594740 -139093114 + L2 LINE L2 2692 2758 -556 189 0 0 0 chr2 111594743 111594764 -139093090 + (T)n Simple_repeat Simple_repeat 1 21 0 491 234 156 29 chr2 111594767 111594972 -139092882 - LTR27 LTR ERV1 -197 439 209 350 211 100 0 chr2 111594966 111595056 -139092798 - AluJb SINE Alu -115 187 89 * 430 301 18 72 chr2 111595709 111595875 -139091979 + L2 LINE L2 2602 2758 -556 1370 225 114 12 chr2 111595900 111596292 -139091562 - LTR28 LTR ERV1 -197 439 1 1934 103 30 36 chr2 111596292 111596593 -139091261 - LTR28-int LTR ERV1 0 7091 6793 10476 240 24 32 chr2 111596750 111599514 -139088340 - MER52-int LTR ERV1 -2858 4233 1492 1105 191 55 5 chr2 111599832 111600052 -139087802 - MER52-int LTR ERV1 -6663 428 198 2204 138 0 0 chr2 111600131 111600436 -139087418 - AluSx SINE Alu -7 305 1 3137 151 25 59 chr2 111600558 111601253 -139086601 - L1MB7 LINE L1 -25 6159 5489 406 223 54 0 chr2 111601264 111601394 -139086460 - L1MB7 LINE L1 -1188 4958 4822 23 54 0 0 chr2 111601645 111601682 -139086172 + AT_rich Low_complexity Low_complexity 1 37 0 365 346 0 10 chr2 111601684 111601788 -139086066 + L2 LINE L2 3138 3240 -32 3695 153 13 5 chr2 111603167 111603787 -139084067 + MER44D DNA MER2_type 78 574 -31 2092 117 30 0 chr2 111603860 111604158 -139083696 - AluSx SINE Alu -5 307 1 1322 213 13 37 chr2 111604571 111604871 -139082983 - AluJo SINE Alu -19 293 1 1888 87 17 74 chr2 111604902 111605201 -139082653 - AluSx SINE Alu -30 282 1 1436 201 7 16 chr2 111605969 111606277 -139081577 - AluJo SINE Alu -7 305 1 201 244 0 0 chr2 111607509 111607554 -139080300 + (CATA)n Simple_repeat Simple_repeat 2 46 0 183 333 37 37 chr2 111608054 111608162 -139079692 + L3 LINE CR1 1327 1434 -143 22 56 0 0 chr2 111608335 111608371 -139079483 + AT_rich Low_complexity Low_complexity 1 36 0 402 191 74 49 chr2 111608469 111608572 -139079282 - L1MD2 LINE L1 -12 6347 6248 1444 127 40 4 chr2 111608572 111608800 -139079054 + MER46A DNA MER2_type 1 236 0 402 191 74 49 chr2 111608800 111609088 -139078766 - L1MD2 LINE L1 -111 6248 5888 2145 123 3 0 chr2 111609088 111609396 -139078458 - AluSx SINE Alu -3 309 1 402 191 74 49 chr2 111609396 111609530 -139078324 - L1MD2 LINE L1 -471 5888 5759 975 172 0 12 chr2 111609530 111609699 -139078155 - AluSg/x SINE Alu -9 301 135 348 204 57 0 chr2 111609700 111609788 -139078066 - L1MD2 LINE L1 -589 5770 5678 197 309 178 52 chr2 111610497 111611128 -139076726 - L2 LINE L2 -1878 1436 727 615 188 0 26 chr2 111611132 111611249 -139076605 + AluJo SINE Alu 86 199 -113 336 291 257 12 chr2 111611250 111611569 -139076285 - L2 LINE L2 -2831 483 87 660 246 84 10 chr2 111613102 111613305 -139074549 + MER58A DNA MER1_type 1 218 -6 242 200 143 0 chr2 111613526 111613596 -139074258 - Charlie1 DNA MER1_type -8 2753 2674 1153 168 23 14 chr2 111613600 111613618 -139074236 - AluSc SINE Alu 0 309 293 1728 80 58 0 chr2 111613618 111613842 -139074012 - AluSc SINE Alu -1 308 72 1153 168 23 14 chr2 111613842 111614043 -139073811 - AluSc SINE Alu -16 293 88 291 128 0 89 chr2 111614044 111614132 -139073722 - AluY SINE Alu -48 253 212 872 48 10 0 chr2 111614414 111614517 -139073337 - AluY SINE Alu -99 212 109 2385 76 3 3 chr2 111614780 111615081 -139072773 - AluY SINE Alu -10 301 1 585 130 137 41 chr2 111615124 111615270 -139072584 - MER3 DNA MER1_type -21 188 29 2104 134 0 31 chr2 111615406 111615727 -139072127 - AluSx SINE Alu -1 311 1 1971 117 48 14 chr2 111615892 111616182 -139071672 - AluSg SINE Alu -10 300 1 414 214 31 10 chr2 111616540 111616638 -139071216 - L1ME1 LINE L1 -50 6116 6017 * 1784 220 37 4 chr2 111616634 111617094 -139070760 - L1MD1 LINE L1 -371 5871 5397 1379 226 94 17 chr2 111617101 111617631 -139070223 - L1MD1 LINE L1 -880 5266 4696 2242 115 0 3 chr2 111617649 111617954 -139069900 - AluSx SINE Alu -8 304 1 28 0 0 0 chr2 111618030 111618058 -139069796 + AT_rich Low_complexity Low_complexity 1 28 0 3861 163 42 50 chr2 111618460 111618523 -139069331 - L1MB4 LINE L1 0 6180 6118 2206 91 11 0 chr2 111618523 111618808 -139069046 - AluSx SINE Alu -24 288 1 3861 163 42 50 chr2 111618808 111619735 -139068119 - L1MB4 LINE L1 -62 6118 5200 35 24 0 0 chr2 111619844 111619886 -139067968 + AT_rich Low_complexity Low_complexity 1 42 0 1733 136 0 4 chr2 111619953 111620203 -139067651 - AluJb SINE Alu -4 308 60 2713 200 35 12 chr2 111620589 111620810 -139067044 + L1ME1 LINE L1 5478 5692 -474 2273 87 27 0 chr2 111620810 111621108 -139066746 + AluSc SINE Alu 1 306 -3 2713 200 35 12 chr2 111621108 111621537 -139066317 + L1ME1 LINE L1 5692 6143 -23 1811 173 0 36 chr2 111621570 111621877 -139065977 + AluJo SINE Alu 1 296 -16 909 200 138 14 chr2 111622230 111622440 -139065414 - MER8 DNA MER2_type -3 236 1 670 255 84 47 chr2 111624085 111624452 -139063402 - L1ME1 LINE L1 -280 5884 5483 2442 70 0 22 chr2 111624452 111624767 -139063087 + AluY SINE Alu 1 308 -3 670 255 84 47 chr2 111624767 111624988 -139062866 - L1ME1 LINE L1 -681 5483 5272 21 36 0 0 chr2 111626644 111626672 -139061182 + AT_rich Low_complexity Low_complexity 1 28 0 586 214 8 30 chr2 111627024 111627041 -139060813 + AluJb SINE Alu 120 136 -176 1392 155 116 32 chr2 111627041 111627318 -139060536 + AluJo SINE Alu 1 300 -12 586 214 8 30 chr2 111627318 111627431 -139060423 + AluJb SINE Alu 136 247 -65 1914 108 4 0 chr2 111628080 111628329 -139059525 + AluSp SINE Alu 44 293 -20 2432 82 0 3 chr2 111628457 111628763 -139059091 + AluY SINE Alu 1 305 -6 619 259 111 37 chr2 111628822 111629065 -139058789 + MIR SINE MIR 1 261 -1 316 297 68 62 chr2 111630457 111630649 -139057205 - L2 LINE L2 -12 3301 3109 500 257 113 4 chr2 111630728 111630997 -139056857 + MLT1G3 LTR MaLR 197 589 -6 1142 242 141 6 chr2 111631001 111631356 -139056498 + MER69 DNA AcHobo 59 461 -2065 2445 81 3 3 chr2 111631368 111631703 -139056151 + L1PA13 LINE L1 5829 6163 0 928 211 110 13 chr2 111631759 111632077 -139055777 + MER69 DNA AcHobo 2010 2358 -168 777 308 146 31 chr2 111632111 111632480 -139055374 + L2 LINE L2 1870 2195 -1119 905 206 70 23 chr2 111632480 111632694 -139055160 - MER58A DNA MER1_type 0 224 1 777 308 146 31 chr2 111632694 111633010 -139054844 + L2 LINE L2 2195 2634 -680 429 303 96 76 chr2 111633171 111633223 -139054631 + L2 LINE L2 2914 2964 -308 2891 120 20 7 chr2 111633223 111633665 -139054189 - MER83 LTR ERV1 0 448 1 429 303 96 76 chr2 111633665 111633926 -139053928 + L2 LINE L2 2964 3233 -39 544 268 35 0 chr2 111634500 111634698 -139053156 - L1MD3 LINE L1 -4 7991 7787 1543 214 0 37 chr2 111635154 111635477 -139052377 + AluJb SINE Alu 2 312 0 2387 88 0 3 chr2 111636271 111636578 -139051276 - AluSg SINE Alu -4 306 1 4051 146 27 12 chr2 111636715 111637460 -139050394 + Tigger2 DNA MER2_type 2 757 -1961 1048 142 112 0 chr2 111637530 111637735 -139050119 + Tigger2 DNA MER2_type 2481 2708 -10 28 0 0 0 chr2 111639913 111639941 -139047913 + AT_rich Low_complexity Low_complexity 1 28 0 247 319 76 51 chr2 111640568 111640725 -139047129 - MIR SINE MIR -55 207 47 907 214 76 0 chr2 111640825 111641087 -139046767 - L1MB7 LINE L1 0 6184 5903 1160 119 37 41 chr2 111643558 111643776 -139044078 - L1PA16 LINE L1 -9 6157 5941 245 192 19 0 chr2 111645345 111645397 -139042457 + CT-rich Low_complexity Low_complexity 2 54 0 251 295 114 38 chr2 111645482 111645587 -139042267 + MIR3 SINE MIR 73 185 -23 28 29 0 0 chr2 111645596 111645631 -139042223 + AT_rich Low_complexity Low_complexity 1 35 0 270 267 92 33 chr2 111646999 111647119 -139040735 + L2 LINE L2 2938 3064 -208 410 279 76 62 chr2 111648064 111648340 -139039514 + L2 LINE L2 3034 3313 0 996 178 191 31 chr2 111648676 111648969 -139038885 + MER2 DNA MER2_type 6 345 0 191 340 150 0 chr2 111649622 111649722 -139038132 - MIR SINE MIR -63 145 31 549 279 83 29 chr2 111649830 111649908 -139037946 + MIR SINE MIR 20 92 -170 180 0 0 0 chr2 111649908 111649928 -139037926 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 549 279 83 29 chr2 111649928 111650053 -139037801 + MIR SINE MIR 92 234 -28 2297 104 7 0 chr2 111650715 111651012 -139036842 - AluSp SINE Alu -13 300 2 2682 167 17 31 chr2 111651857 111651899 -139035955 - L1MCb LINE L1 -4851 1194 1153 1767 193 40 3 chr2 111651899 111652247 -139035607 - MLT1A1 LTR MaLR -3 362 2 2682 167 17 31 chr2 111652247 111652306 -139035548 - L1MCb LINE L1 -4892 1153 1095 2478 81 0 0 chr2 111652306 111652615 -139035239 - AluY SINE Alu -2 309 1 2682 167 17 31 chr2 111652615 111653322 -139034532 - L1MCb LINE L1 -4950 1095 721 262 179 0 0 chr2 111653330 111653386 -139034468 + L1MD3 LINE L1 7581 7636 -359 580 242 65 5 chr2 111653397 111653583 -139034271 + L1MD3 LINE L1 7746 7942 -53 348 231 26 0 chr2 111653653 111653731 -139034123 - L1MD3 LINE L1 -1433 6562 6483 1973 133 23 10 chr2 111653959 111654267 -139033587 + AluSx SINE Alu 1 312 0 1012 143 0 25 chr2 111654267 111654459 -139033395 + AluSg/x SINE Alu 134 312 0 2405 65 0 0 chr2 111654863 111655155 -139032699 - AluY SINE Alu -19 292 1 1246 180 13 0 chr2 111655155 111655430 -139032424 - MER33 DNA MER1_type -52 272 1 1884 172 10 7 chr2 111656304 111656612 -139031242 - AluSc SINE Alu 0 309 1 2180 110 7 3 chr2 111658334 111658633 -139029221 + AluSc SINE Alu 1 300 -9 2426 72 10 3 chr2 111659392 111659697 -139028157 + AluY SINE Alu 1 307 -4 263 270 35 43 chr2 111660375 111660490 -139027364 - MIR SINE MIR -80 182 69 21 57 0 0 chr2 111660872 111660907 -139026947 + AT_rich Low_complexity Low_complexity 1 35 0 2687 73 123 8 chr2 111660919 111661283 -139026571 + MLT2A1 LTR ERVL 1 416 -28 269 26 0 26 chr2 111661283 111661322 -139026532 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 2687 73 123 8 chr2 111661322 111661355 -139026499 + MLT2A1 LTR ERVL 416 444 0 1982 109 4 4 chr2 111661856 111662130 -139025724 + AluSg1 SINE Alu 1 274 -35 186 71 0 0 chr2 111662134 111662162 -139025692 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1870 161 0 3 chr2 111662580 111662871 -139024983 - AluSx SINE Alu -22 290 1 256 348 54 22 chr2 111662923 111663015 -139024839 - MIR SINE MIR -78 130 36 686 69 0 0 chr2 111663574 111663661 -139024193 + AluY SINE Alu 1 87 -223 997 152 54 75 chr2 111664475 111664772 -139023082 + MER33 DNA MER1_type 1 274 -50 183 42 0 0 chr2 111664772 111664796 -139023058 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 875 189 0 7 chr2 111664796 111664939 -139022915 - FRAM SINE Alu -30 146 5 354 277 121 14 chr2 111665108 111665249 -139022605 + MIR3 SINE MIR 45 200 -8 2032 142 13 3 chr2 111666369 111666678 -139021176 - AluSx SINE Alu 0 312 1 198 143 0 0 chr2 111669355 111669390 -139018464 + (ATG)n Simple_repeat Simple_repeat 2 36 0 941 215 31 51 chr2 111669390 111669646 -139018208 - MIR SINE MIR -10 252 2 30 0 0 0 chr2 111670548 111670578 -139017276 + AT_rich Low_complexity Low_complexity 1 30 0 343 263 121 60 chr2 111671248 111671480 -139016374 + L1ME4a LINE L1 5773 6018 -103 290 315 30 25 chr2 111671611 111671784 -139016070 + MIR SINE MIR 24 197 -65 617 285 42 23 chr2 111671987 111672201 -139015653 + MIR SINE MIR 24 241 -21 23 54 0 0 chr2 111672967 111673004 -139014850 + AT_rich Low_complexity Low_complexity 1 37 0 2053 130 7 3 chr2 111673056 111673356 -139014498 - AluSx SINE Alu -9 303 3 363 296 98 15 chr2 111674586 111674718 -139013136 - MIR3 SINE MIR -57 151 9 2171 110 0 0 chr2 111675346 111675647 -139012207 + AluSx SINE Alu 1 301 0 1628 177 34 14 chr2 111675677 111675971 -139011883 + AluJb SINE Alu 1 300 -12 21 0 0 0 chr2 111676190 111676211 -139011643 + AT_rich Low_complexity Low_complexity 1 21 0 285 253 0 0 chr2 111676602 111676685 -139011169 + T-rich Low_complexity Low_complexity 1 83 0 1002 159 17 11 chr2 111677541 111677717 -139010137 + AluSg/x SINE Alu 132 308 -2 1542 100 0 92 chr2 111678485 111678736 -139009118 - AluY SINE Alu -83 228 1 202 164 73 73 chr2 111679033 111679088 -139008766 - MIR SINE MIR -21 241 187 1619 108 0 5 chr2 111680407 111680650 -139007204 + AluSg/x SINE Alu 68 309 0 1243 156 5 9 chr2 111680758 111680969 -139006885 + AluJo SINE Alu 77 286 -26 2286 96 3 3 chr2 111680977 111681278 -139006576 + AluSq SINE Alu 1 301 -12 237 220 34 0 chr2 111681334 111681393 -139006461 + L1ME4a LINE L1 5978 6038 -83 190 313 20 144 chr2 111681993 111682048 -139005806 - MER5B DNA MER1_type -6 172 112 1409 243 6 118 chr2 111682048 111682386 -139005468 + AluY SINE Alu 1 300 -1 190 313 20 144 chr2 111682386 111682460 -139005394 - MER5B DNA MER1_type -66 112 72 1633 179 14 23 chr2 111682460 111682588 -139005266 + L1MB8 LINE L1 5820 5948 -230 2739 13 0 0 chr2 111682588 111682887 -139004967 + AluYa5 SINE Alu 1 299 -12 1633 179 14 23 chr2 111682887 111683105 -139004749 + L1MB8 LINE L1 5948 6163 -15 190 313 20 144 chr2 111683105 111683169 -139004685 - MER5B DNA MER1_type -106 72 2 187 339 136 0 chr2 111683693 111683811 -139004043 + L2 LINE L2 3137 3270 -2 1897 125 0 36 chr2 111684385 111684690 -139003164 + AluSx SINE Alu 4 297 -15 1980 137 23 23 chr2 111684694 111685000 -139002854 + AluJb SINE Alu 1 306 -6 404 350 144 12 chr2 111685304 111685561 -139002293 + L3 LINE CR1 1209 1499 -78 566 234 134 69 chr2 111685604 111685954 -139001900 + L1MC4a LINE L1 5520 5892 -1916 385 298 42 48 chr2 111686427 111686472 -139001382 - L3 LINE CR1 -1037 540 496 2152 116 3 10 chr2 111686472 111686773 -139001081 - AluSx SINE Alu -13 299 1 385 298 42 48 chr2 111686773 111686895 -139000959 - L3 LINE CR1 -1081 496 374 1757 142 7 31 chr2 111687316 111687605 -139000249 + AluJo SINE Alu 1 282 -30 257 182 0 0 chr2 111687631 111687675 -139000179 + Alu SINE Alu 1 44 -258 435 182 39 0 chr2 111687676 111687753 -139000101 + AluJo/FRAM SINE Alu 198 277 -35 2434 73 0 10 chr2 111687807 111688121 -138999733 + AluY SINE Alu 1 311 0 2146 118 0 7 chr2 111688299 111688595 -138999259 + AluSc SINE Alu 1 294 -15 2190 95 7 3 chr2 111688606 111688901 -138998953 + AluSp SINE Alu 1 296 -17 2396 68 0 7 chr2 111689080 111689374 -138998480 + AluY SINE Alu 3 294 -17 2226 113 0 3 chr2 111689384 111689693 -138998161 + AluSc SINE Alu 2 309 0 2233 117 0 13 chr2 111690882 111691190 -138996664 - AluSg SINE Alu -6 304 1 952 246 7 40 chr2 111691337 111691472 -138996382 + Charlie1b DNA MER1_type 13 136 -2625 2149 116 0 7 chr2 111691472 111691773 -138996081 - AluSc SINE Alu -10 299 1 952 246 7 40 chr2 111691773 111691914 -138995940 + Charlie1b DNA MER1_type 136 280 -243 527 238 206 40 chr2 111692249 111692526 -138995328 - MLT1I LTR MaLR -5 404 82 232 287 40 69 chr2 111692828 111692929 -138994925 + MIR SINE MIR 20 117 -91 193 143 102 41 chr2 111693423 111693472 -138994382 - L2 LINE L2 -1384 1930 1879 2288 100 7 0 chr2 111693812 111694102 -138993752 - AluSq SINE Alu -21 292 1 293 310 176 38 chr2 111694308 111694701 -138993153 + L2 LINE L2 2824 3270 -2 309 175 0 16 chr2 111695698 111695761 -138992093 - MER20 DNA MER1_type -24 195 134 228 208 0 21 chr2 111696412 111696460 -138991394 + MER20 DNA MER1_type 1 47 -172 2393 83 0 3 chr2 111696502 111696802 -138991052 - AluSx SINE Alu -13 299 1 337 142 198 66 chr2 111697272 111697378 -138990476 + MER21B LTR ERV1 696 815 -48 21 0 0 0 chr2 111697779 111697800 -138990054 + AT_rich Low_complexity Low_complexity 1 21 0 1660 70 0 19 chr2 111698409 111698622 -138989232 + AluY SINE Alu 103 311 0 1262 245 122 50 chr2 111698623 111699719 -138988135 - L1ME LINE L1 -4386 1875 93 384 59 0 0 chr2 111699721 111699772 -138988082 + (TG)n Simple_repeat Simple_repeat 2 52 0 844 186 38 22 chr2 111700583 111700766 -138987088 - L1ME LINE L1 -656 5900 5715 2137 130 7 0 chr2 111701099 111701398 -138986456 - AluSx SINE Alu -11 301 1 284 0 28 0 chr2 111701657 111701693 -138986161 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1667 181 53 15 chr2 111702060 111702398 -138985456 + MLT2D LTR ERVL 1 351 -63 1236 242 26 16 chr2 111702508 111703319 -138984535 - L1ME LINE L1 -2721 3819 2866 276 222 117 62 chr2 111703316 111703478 -138984376 - L1ME LINE L1 -5894 646 476 * 883 129 86 0 chr2 111703477 111703616 -138984238 - L1ME LINE L1 -6374 166 16 1804 112 0 4 chr2 111704085 111704326 -138983528 - AluSx SINE Alu -9 303 64 1850 167 13 3 chr2 111711526 111711826 -138976028 + AluSx SINE Alu 1 303 -9 1994 122 7 11 chr2 111711828 111712166 -138975688 + AluSx SINE Alu 1 337 0 1354 205 67 77 chr2 111713956 111714130 -138973724 + L1ME3 LINE L1 5722 5896 -266 2386 96 3 6 chr2 111714130 111714442 -138973412 + AluSx SINE Alu 1 311 -1 1354 205 67 77 chr2 111714442 111714687 -138973167 + L1ME3 LINE L1 5896 6137 -25 2451 145 26 17 chr2 111714687 111715107 -138972747 + MSTB LTR MaLR 1 424 -2 1354 205 67 77 chr2 111715107 111715131 -138972723 + L1ME3 LINE L1 6137 6160 -2 1108 210 52 58 chr2 111715919 111716262 -138971592 + L1MDa LINE L1 1485 1825 -4715 1839 114 4 15 chr2 111716262 111716534 -138971320 + AluSx SINE Alu 1 269 -43 368 280 0 11 chr2 111716601 111716694 -138971160 - L1MD2 LINE L1 -74 6565 6474 3914 232 56 29 chr2 111716699 111717250 -138970604 - L1MD2 LINE L1 -208 6431 5897 1989 187 14 11 chr2 111717250 111717614 -138970240 + MLT1A1 LTR MaLR 1 365 0 3914 232 56 29 chr2 111717614 111718979 -138968875 - L1MD2 LINE L1 -742 5897 4467 781 226 17 0 chr2 111719085 111719273 -138968581 + L1M4c LINE L1 1379 1649 -4733 243 296 129 23 chr2 111720136 111720268 -138967586 + MIR SINE MIR 110 255 -7 725 189 6 0 chr2 111720268 111720427 -138967427 + (TGG)n Simple_repeat Simple_repeat 2 161 0 1853 155 3 29 chr2 111722170 111722486 -138965368 + AluJb SINE Alu 5 312 0 503 234 56 0 chr2 111723302 111723409 -138964445 + MER81 DNA DNA 1 113 -1 291 132 19 0 chr2 111724145 111724198 -138963656 + MIR SINE MIR 90 143 -119 264 233 11 33 chr2 111724534 111724624 -138963230 + T-rich Low_complexity Low_complexity 3 90 0 3918 225 142 15 chr2 111725731 111725747 -138962107 - L1P5 LINE L1 -317 5837 5824 1540 117 0 0 chr2 111725747 111725952 -138961902 + AluSx SINE Alu 1 205 -107 3918 225 142 15 chr2 111725952 111727131 -138960723 - L1P5 LINE L1 -330 5824 4436 387 0 0 0 chr2 111727131 111727174 -138960680 + (TG)n Simple_repeat Simple_repeat 2 44 0 3918 225 142 15 chr2 111727174 111727532 -138960322 - L1P5 LINE L1 -1718 4436 4125 747 252 87 30 chr2 111727532 111727689 -138960165 - L1MD2 LINE L1 -2508 3918 3771 1724 166 21 7 chr2 111727689 111727972 -138959882 + AluJb SINE Alu 1 287 -25 747 252 87 30 chr2 111727972 111728273 -138959581 - L1MD2 LINE L1 -2655 3771 3421 181 219 31 31 chr2 111730089 111730153 -138957701 - L3b LINE CR1 -242 1341 1278 279 86 0 0 chr2 111730236 111730271 -138957583 + U2 snRNA snRNA 1 35 -153 1441 234 130 37 chr2 111730271 111730924 -138956930 + L1ME1 LINE L1 1195 1908 -4632 827 168 13 13 chr2 111730928 111731083 -138956771 - L1MD2 LINE L1 -5534 892 738 4517 148 46 158 chr2 111731083 111732631 -138955223 + MER52C LTR ERV1 1 1278 0 3466 169 42 84 chr2 111732631 111733384 -138954470 - L1MD2 LINE L1 -5685 741 20 * 10244 229 46 23 chr2 111733380 111736069 -138951785 + L1ME1 LINE L1 1895 4520 -2040 2247 129 25 25 chr2 111736069 111736433 -138951421 - THE1B LTR MaLR 0 364 1 10244 229 46 23 chr2 111736433 111736550 -138951304 + L1ME1 LINE L1 4520 4633 -1927 1762 176 3 10 chr2 111736550 111736851 -138951003 + AluSx SINE Alu 1 299 -13 10244 229 46 23 chr2 111736851 111738555 -138949299 + L1ME1 LINE L1 4633 6554 -6 183 151 27 123 chr2 111739576 111739649 -138948205 - MIR SINE MIR -191 71 6 961 299 113 16 chr2 111740042 111740670 -138947184 - L2 LINE L2 -659 2655 1967 335 304 72 16 chr2 111740767 111740892 -138946962 - L2 LINE L2 -5 3267 3136 311 271 12 0 chr2 111740931 111741016 -138946838 - MIR SINE MIR -81 181 96 1600 213 42 18 chr2 111741212 111741663 -138946191 + L1ME2 LINE L1 4824 5285 -861 242 108 27 0 chr2 111742000 111742037 -138945817 - MLT2C1 LTR ERVL -11 386 349 2649 144 126 8 chr2 111742041 111742526 -138945328 - Tigger3(Golem) DNA MER2_type -1 3028 2487 265 196 20 0 chr2 111742731 111742782 -138945072 + Tigger3(Golem) DNA MER2_type 49 100 -2929 * 2775 122 19 2 chr2 111742778 111743189 -138944665 + Tigger3(Golem) DNA MER2_type 2591 3008 -21 1283 240 69 22 chr2 111743205 111743568 -138944286 + L1ME2 LINE L1 5783 6162 -2 277 217 194 16 chr2 111744338 111744467 -138943387 - MLT1K LTR MaLR -297 291 140 237 297 18 36 chr2 111745357 111745468 -138942386 - L2 LINE L2 -221 3051 2943 279 146 36 0 chr2 111745709 111745764 -138942090 + MER113 DNA MER1_type? 152 208 -313 220 324 0 0 chr2 111745866 111745934 -138941920 - L2 LINE L2 -560 2754 2687 1700 167 103 88 chr2 111746493 111746901 -138940953 + MLT2C2 LTR ERVL 1 414 0 515 239 133 93 chr2 111746961 111746993 -138940861 - MLT1G1 LTR MaLR -32 523 494 2395 78 0 28 chr2 111746993 111747313 -138940541 + AluY SINE Alu 1 311 0 515 239 133 93 chr2 111747313 111747798 -138940056 - MLT1G1 LTR MaLR -61 494 16 351 299 51 8 chr2 111748426 111748543 -138939311 + MER5B DNA MER1_type 57 178 0 1440 205 112 9 chr2 111749654 111749985 -138937869 - MLT1A1 LTR MaLR 0 365 1 432 241 43 43 chr2 111750952 111751068 -138936786 + L2 LINE L2 3198 3313 0 198 0 0 0 chr2 111751155 111751177 -138936677 + (A)n Simple_repeat Simple_repeat 1 22 0 242 319 121 13 chr2 111751268 111751425 -138936429 + L1ME LINE L1 5531 5704 -417 671 250 50 6 chr2 111752315 111752475 -138935379 - MER5B DNA MER1_type -2 176 10 387 296 25 31 chr2 111752596 111752755 -138935099 + MIR SINE MIR 35 192 -70 1967 153 46 14 chr2 111753040 111753387 -138934467 - MLT1A1 LTR MaLR 0 365 8 581 306 10 10 chr2 111754404 111754603 -138933251 - MIR SINE MIR -62 200 2 247 271 103 37 chr2 111754634 111754741 -138933113 + MER5A DNA MER1_type 19 132 -57 2207 109 26 0 chr2 111755030 111755334 -138932520 - AluSx SINE Alu 0 312 1 1369 211 187 48 chr2 111756091 111756593 -138931261 + MLT1G1 LTR MaLR 22 593 -2 235 208 0 0 chr2 111756881 111756929 -138930925 + (TG)n Simple_repeat Simple_repeat 2 49 0 201 321 12 0 chr2 111757253 111757337 -138930517 + CT-rich Low_complexity Low_complexity 1 85 0 337 248 147 8 chr2 111758241 111758370 -138929484 - MIR SINE MIR -112 150 4 233 324 0 0 chr2 111758465 111758533 -138929321 - L2 LINE L2 -249 3023 2956 458 248 71 7 chr2 111758954 111759095 -138928759 + MIR SINE MIR 1 150 -112 822 294 45 88 chr2 111760237 111760656 -138927198 + MLT1I LTR MaLR 1 401 -8 194 339 46 0 chr2 111761228 111761293 -138926561 - L2 LINE L2 -1 3271 3204 1695 316 158 17 chr2 111761736 111763290 -138924564 - L2 LINE L2 -768 2546 775 595 250 87 16 chr2 111763460 111763644 -138924210 + MIR SINE MIR 27 223 -39 984 228 100 48 chr2 111763666 111763753 -138924101 + MLT1C LTR MaLR 1 82 -385 1706 150 0 0 chr2 111763753 111764019 -138923835 - AluSx SINE Alu -17 295 30 984 228 100 48 chr2 111764019 111764402 -138923452 + MLT1C LTR MaLR 82 463 -4 1461 178 0 11 chr2 111765002 111765278 -138922576 + AluJb SINE Alu 33 305 -7 195 42 0 0 chr2 111766196 111766220 -138921634 + (TCTG)n Simple_repeat Simple_repeat 2 25 0 347 280 170 0 chr2 111766633 111766733 -138921121 - L2 LINE L2 -6 3266 3150 395 282 83 6 chr2 111766886 111767042 -138920812 - L2 LINE L2 -253 3060 2893 2209 108 16 0 chr2 111767490 111767795 -138920059 + AluSg SINE Alu 1 310 0 233 234 0 0 chr2 111767900 111767947 -138919907 - L2 LINE L2 -3 3310 3264 410 325 108 0 chr2 111769002 111769159 -138918695 + MER5B DNA MER1_type 1 174 -4 1582 167 78 82 chr2 111769774 111770223 -138917631 - L1MC4 LINE L1 0 8042 7596 183 237 0 0 chr2 111770224 111770262 -138917592 + L2 LINE L2 2712 2749 -565 298 280 236 35 chr2 111770405 111770723 -138917131 + L2 LINE L2 2932 3313 0 661 318 41 25 chr2 111772449 111772694 -138915160 + MIR SINE MIR 14 262 0 237 238 32 0 chr2 111773518 111773581 -138914273 - LTR67 LTR ERVL -3 554 490 371 311 171 33 chr2 111774187 111774550 -138913304 + L1M4 LINE L1 4733 5145 -1001 1286 60 0 6 chr2 111774550 111774718 -138913136 - AluY SINE Alu 0 311 145 1607 204 57 57 chr2 111774774 111775268 -138912586 + L1ME2 LINE L1 5658 6151 -13 361 265 82 31 chr2 111775311 111775507 -138912347 + L1MC4 LINE L1 7836 8041 -1 370 226 239 18 chr2 111775513 111775714 -138912140 + L1M4 LINE L1 5196 5435 -749 203 0 37 0 chr2 111776040 111776067 -138911787 + (CA)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr2 111779351 111779380 -138908474 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr2 111781396 111781419 -138906435 + (A)n Simple_repeat Simple_repeat 1 23 0 1600 156 106 25 chr2 111784026 111784385 -138903469 + MLT1B LTR MaLR 3 390 0 187 281 116 33 chr2 111785903 111786024 -138901830 - MIR SINE MIR -74 188 58 37 62 0 0 chr2 111786691 111786756 -138901098 + AT_rich Low_complexity Low_complexity 1 65 0 2306 213 89 45 chr2 111790374 111791243 -138896611 + L1MC4 LINE L1 6879 8040 -2 2062 107 10 3 chr2 111791894 111792185 -138895669 - AluSq SINE Alu -20 293 1 1971 118 4 0 chr2 111794079 111794398 -138893456 + AluSc SINE Alu 1 320 0 197 246 82 16 chr2 111794607 111794668 -138893186 + L3 LINE CR1 1378 1442 -135 306 274 115 26 chr2 111797279 111797392 -138890462 - L2 LINE L2 -4 3309 3187 405 0 0 0 chr2 111797885 111797930 -138889924 + (TG)n Simple_repeat Simple_repeat 1 45 0 180 0 0 0 chr2 111797929 111797949 -138889905 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 233 204 20 0 chr2 111798643 111798692 -138889162 + LTR26B LTR ERV1 251 300 -231 195 42 0 0 chr2 111799336 111799360 -138888494 + (A)n Simple_repeat Simple_repeat 1 24 0 243 341 78 11 chr2 111801639 111801818 -138886036 - L3 LINE CR1 -107 1470 1280 2261 107 0 7 chr2 111803278 111803578 -138884276 + AluSq SINE Alu 1 298 -15 4099 17 2 0 chr2 111803609 111804072 -138883782 - L1PA2 LINE L1 -7 6148 5685 2250 117 7 3 chr2 111806969 111807278 -138880576 + AluSx SINE Alu 1 310 -2 180 0 0 0 chr2 111807625 111807645 -138880209 + (A)n Simple_repeat Simple_repeat 1 20 0 1181 209 177 3 chr2 111808459 111808770 -138879084 + MLT1A1 LTR MaLR 1 365 0 468 283 52 83 chr2 111808790 111809309 -138878545 + L1MDa LINE L1 5 507 -6033 4007 214 79 32 chr2 111809979 111811940 -138875914 + L1M2c LINE L1 1394 3427 -3113 4383 106 84 99 chr2 111811977 111812233 -138875621 + MER4B-int LTR ERV1 4841 5099 -1309 454 202 0 0 chr2 111812233 111812317 -138875537 + L1M4 LINE L1 2708 2791 -3355 4383 106 84 99 chr2 111812317 111812964 -138874890 + MER4B-int LTR ERV1 5099 5776 -632 927 204 14 80 chr2 111812963 111813225 -138874629 + MER4B-int LTR ERV1 4755 6064 -257 * 1887 171 64 6 chr2 111813236 111813582 -138874272 + LTR47A LTR ERVL 1 366 -86 2905 253 92 43 chr2 111813593 111814857 -138872997 + L1M2c LINE L1 3422 4746 -1794 2348 95 10 0 chr2 111814875 111815180 -138872674 + AluSx SINE Alu 1 308 -4 2929 182 51 11 chr2 111815234 111815845 -138872009 + L1MD2 LINE L1 5722 6356 -3 435 195 23 31 chr2 111816339 111816467 -138871387 - MER33 DNA MER1_type 0 363 237 580 196 29 0 chr2 111816490 111816592 -138871262 + L1MD2 LINE L1 6002 6106 -253 4307 158 16 8 chr2 111816599 111817340 -138870514 + L1MB2 LINE L1 5417 6163 -8 695 184 103 6 chr2 111817347 111817521 -138870333 - MER33 DNA MER1_type -107 217 27 186 43 0 0 chr2 111817840 111817863 -138869991 + (A)n Simple_repeat Simple_repeat 1 23 0 588 313 111 10 chr2 111819946 111820253 -138867601 + MER102b DNA MER1_type 4 341 0 2363 88 3 0 chr2 111820650 111820946 -138866908 + AluY SINE Alu 1 297 -14 239 244 18 36 chr2 111822499 111822667 -138865187 + (CCG)n Simple_repeat Simple_repeat 1 165 0 453 36 0 0 chr2 111824218 111824273 -138863581 + (CGG)n Simple_repeat Simple_repeat 2 56 0 25 31 0 0 chr2 111824438 111824470 -138863384 + GC_rich Low_complexity Low_complexity 1 32 0 265 231 0 15 chr2 111827959 111828024 -138859830 + C-rich Low_complexity Low_complexity 4 67 0 210 250 125 9 chr2 111829226 111829338 -138858516 + L3 LINE CR1 1258 1382 -195 24 0 0 0 chr2 111829822 111829846 -138858008 + AT_rich Low_complexity Low_complexity 1 24 0 776 242 58 82 chr2 111830775 111831139 -138856715 + MLT1H LTR MaLR 95 449 -100 398 308 148 6 chr2 111831847 111832029 -138855825 - MIR SINE MIR -8 254 47 1957 156 0 7 chr2 111833847 111834154 -138853700 + AluJb SINE Alu 8 312 0 691 254 68 63 chr2 111835000 111835198 -138852656 + L1MEc LINE L1 775 971 -5234 2341 118 3 0 chr2 111835198 111835504 -138852350 + AluSx SINE Alu 1 307 -5 691 254 68 63 chr2 111835504 111835863 -138851991 + L1MEc LINE L1 971 1221 -4984 844 210 93 68 chr2 111836179 111836499 -138851355 + L1ME2 LINE L1 5789 6121 -43 2409 82 10 3 chr2 111836499 111836804 -138851050 + AluSp SINE Alu 1 307 -6 844 210 93 68 chr2 111836804 111836849 -138851005 + L1ME2 LINE L1 6121 6163 -1 2250 102 3 3 chr2 111837388 111837726 -138850128 + AluSp SINE Alu 1 313 0 5226 231 84 24 chr2 111837739 111839364 -138848490 + L1MD1 LINE L1 24 1883 -4657 4623 209 53 39 chr2 111839365 111841407 -138846447 + L1MD1 LINE L1 4585 6636 0 2173 111 0 19 chr2 111841852 111842167 -138845687 - AluSx SINE Alu -3 309 1 275 259 18 36 chr2 111846158 111846270 -138841584 + MIR SINE MIR 88 197 -65 2393 184 95 78 chr2 111846402 111846740 -138841114 - L1MD3 LINE L1 0 7995 7664 1505 128 22 4 chr2 111846740 111846966 -138840888 - MER30 DNA MER1_type 0 230 1 2393 184 95 78 chr2 111846966 111847201 -138840653 - L1MD3 LINE L1 -331 7664 7435 467 186 0 62 chr2 111847201 111847298 -138840556 - MLT1F1 LTR MaLR -442 125 35 2393 184 95 78 chr2 111847298 111847723 -138840131 - L1MD3 LINE L1 -560 7435 6686 355 240 67 19 chr2 111847778 111847882 -138839972 + MIR SINE MIR 74 182 -80 235 236 0 0 chr2 111847944 111847999 -138839855 + L1ME LINE L1 93 147 -5972 412 313 72 34 chr2 111848449 111848656 -138839198 + L1ME LINE L1 710 934 -5185 2024 87 0 23 chr2 111848656 111848967 -138838887 + AluSg SINE Alu 21 325 0 412 313 72 34 chr2 111848967 111849049 -138838805 + L1ME LINE L1 934 1011 -5108 2076 133 3 0 chr2 111849488 111849797 -138838057 + AluSx SINE Alu 3 312 0 800 238 191 65 chr2 111850000 111850451 -138837403 + MLT1H1 LTR MaLR 1 493 -62 1962 171 80 24 chr2 111850451 111850826 -138837028 + MSTD LTR MaLR 1 396 0 800 238 191 65 chr2 111850826 111850898 -138836956 + MLT1H1 LTR MaLR 493 555 0 2005 138 6 3 chr2 111851283 111851594 -138836260 - AluSx SINE Alu 0 312 1 484 263 5 52 chr2 111852472 111852666 -138835188 - L1MC5 LINE L1 -25 7936 7752 552 237 103 16 chr2 111852932 111853126 -138834728 - L1MC5 LINE L1 -49 7912 7702 23 54 0 0 chr2 111853591 111853628 -138834226 + AT_rich Low_complexity Low_complexity 1 37 0 233 310 28 0 chr2 111853759 111853830 -138834024 - L3 LINE CR1 -5 1572 1500 817 263 72 107 chr2 111853830 111854370 -138833484 - LTR33 LTR ERVL 0 521 1 183 256 0 0 chr2 111854370 111854413 -138833441 - L3 LINE CR1 -73 1504 1462 645 315 70 41 chr2 111855013 111855426 -138832428 - L3 LINE CR1 -208 1369 945 25 0 0 0 chr2 111855564 111855589 -138832265 + AT_rich Low_complexity Low_complexity 1 25 0 191 331 44 87 chr2 111855798 111855847 -138832007 - L3 LINE CR1 -1118 459 409 2251 68 7 4 chr2 111855847 111856156 -138831698 - AluSc SINE Alu 0 312 3 191 331 44 87 chr2 111856156 111856380 -138831474 - L3 LINE CR1 -1168 409 197 16285 165 19 29 chr2 111856382 111860498 -138827356 - L1PA13 LINE L1 -1 6162 2096 459 0 0 0 chr2 111860867 111860918 -138826936 + (TG)n Simple_repeat Simple_repeat 2 52 0 909 128 0 23 chr2 111860999 111861132 -138826722 - FLAM_C SINE Alu -3 130 1 297 287 58 0 chr2 111861233 111861320 -138826534 - MIR SINE MIR -2 260 169 2385 201 95 28 chr2 111861342 111861909 -138825945 + MER77 LTR ERV1 1 605 0 14318 93 4 3 chr2 111861982 111864664 -138823190 - L1PA7 LINE L1 -1 6153 3481 4272 74 29 0 chr2 111864668 111865265 -138822589 + L1PA7 LINE L1 2849 3462 -2684 233 370 0 0 chr2 111865417 111865509 -138822345 + L1MD2 LINE L1 370 461 -5935 1165 153 32 103 chr2 111865803 111866085 -138821769 + L1PB4 LINE L1 5887 6148 -8 7558 221 59 43 chr2 111866194 111866613 -138821241 + L1MD2 LINE L1 765 1176 -5230 2130 140 3 0 chr2 111866613 111866921 -138820933 + AluSx SINE Alu 1 309 -3 7558 221 59 43 chr2 111866921 111868030 -138819824 + L1MD2 LINE L1 1176 2266 -4140 1905 224 85 35 chr2 111868030 111868511 -138819343 + MLT1D LTR MaLR 1 505 0 7558 221 59 43 chr2 111868511 111870292 -138817562 + L1MD2 LINE L1 2266 4086 -2320 1657 195 0 0 chr2 111870292 111870574 -138817280 + AluJb SINE Alu 11 292 -20 7558 221 59 43 chr2 111870574 111871539 -138816315 + L1MD2 LINE L1 4086 5034 -1372 898 220 63 0 chr2 111871654 111871932 -138815922 + L1MD2 LINE L1 5588 5914 -743 745 172 141 42 chr2 111871934 111872126 -138815728 + MER20 DNA MER1_type 1 211 -8 1600 211 7 16 chr2 111872139 111872550 -138815304 + L1MD2 LINE L1 5909 6311 -115 195 308 179 31 chr2 111872710 111872905 -138814949 + L2 LINE L2 3044 3267 -5 3640 114 34 19 chr2 111873917 111874454 -138813400 - L1PA13 LINE L1 -18 6145 5601 1054 154 86 64 chr2 111874951 111875111 -138812743 + MLT1B LTR MaLR 1 169 -221 2275 115 0 6 chr2 111875111 111875423 -138812431 + AluSx SINE Alu 1 310 -2 1054 154 86 64 chr2 111875423 111875496 -138812358 + MLT1B LTR MaLR 169 239 -151 264 267 171 9 chr2 111876680 111876785 -138811069 + L2 LINE L2 3144 3265 -7 458 295 70 38 chr2 111877243 111877585 -138810269 - L1M4 LINE L1 -3190 2956 2604 9383 209 72 48 chr2 111877932 111879853 -138808001 - L1MD1 LINE L1 -3 6633 4759 1741 166 31 54 chr2 111879853 111880104 -138807750 - MER2 DNA MER2_type -1 343 101 2477 66 0 0 chr2 111880104 111880406 -138807448 - AluY SINE Alu -9 302 1 1741 166 31 54 chr2 111880406 111880504 -138807350 - MER2 DNA MER2_type -243 101 2 9383 209 72 48 chr2 111880504 111885043 -138802811 - L1MD1 LINE L1 -1877 4759 27 1517 194 33 20 chr2 111885298 111885602 -138802252 - AluJo SINE Alu -4 308 1 625 309 32 52 chr2 111887410 111887662 -138800192 + L2 LINE L2 3011 3257 -15 2432 86 0 0 chr2 111887752 111888054 -138799800 - AluY SINE Alu -9 302 1 21 0 0 0 chr2 111888054 111888075 -138799779 + AT_rich Low_complexity Low_complexity 1 21 0 789 174 0 0 chr2 111888346 111888467 -138799387 - FRAM SINE Alu -15 161 41 239 234 0 0 chr2 111888532 111888579 -138799275 + L2 LINE L2 3258 3304 -9 503 221 21 64 chr2 111891083 111891223 -138796631 - MER94 DNA DNA 0 134 1 422 283 46 17 chr2 111891409 111891582 -138796272 - MIR3 SINE MIR -15 193 16 22 0 0 0 chr2 111892768 111892790 -138795064 + AT_rich Low_complexity Low_complexity 1 22 0 2127 121 0 3 chr2 111892791 111893081 -138794773 + AluSx SINE Alu 1 289 -23 188 175 158 18 chr2 111895510 111895567 -138792287 + L2 LINE L2 2740 2804 -510 2907 91 11 8 chr2 111897796 111898170 -138789684 + THE1C LTR MaLR 1 375 0 419 271 25 8 chr2 111898206 111898328 -138789526 + MIR SINE MIR 23 146 -116 1573 60 51 5 chr2 111898937 111899154 -138788700 - THE1C LTR MaLR -26 349 123 942 280 186 7 chr2 111900127 111900556 -138787298 + MER115 DNA AcHobo 110 615 -78 224 275 88 44 chr2 111904002 111904093 -138783761 + L2 LINE L2 3202 3296 -17 21 36 0 0 chr2 111905815 111905843 -138782011 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 111906188 111906212 -138781642 + AT_rich Low_complexity Low_complexity 1 24 0 459 290 58 10 chr2 111906288 111906495 -138781359 + MIR SINE MIR 40 256 -6 212 258 16 16 chr2 111906508 111906570 -138781284 - MIR SINE MIR -42 220 159 285 279 132 0 chr2 111906810 111906974 -138780880 + MIR SINE MIR 58 250 -12 276 77 0 0 chr2 111908198 111908237 -138779617 + (TCCC)n Simple_repeat Simple_repeat 3 41 0 533 71 12 2 chr2 111909395 111909640 -138778214 + AluY SINE Alu 1 299 -13 693 304 16 24 chr2 111910282 111910532 -138777322 - MIR SINE MIR -14 248 1 1045 180 33 14 chr2 111912158 111912369 -138775485 - MER20 DNA MER1_type -4 215 1 528 260 120 0 chr2 111915430 111915630 -138772224 - MIR SINE MIR -37 225 2 787 220 43 0 chr2 111915919 111916105 -138771749 + L1MC3 LINE L1 4001 4194 -1952 330 154 0 0 chr2 111916105 111916157 -138771697 + Alu SINE Alu 1 52 -250 638 168 80 32 chr2 111916159 111916284 -138771570 + AluJb SINE Alu 173 303 -9 3310 217 70 55 chr2 111916284 111916348 -138771506 + L1MC3 LINE L1 4185 4247 -1919 1568 183 0 17 chr2 111916348 111916658 -138771196 - AluJo SINE Alu 0 305 1 3310 217 70 55 chr2 111916658 111916678 -138771176 + L1MC3 LINE L1 4247 4265 -1901 3057 157 8 60 chr2 111916678 111916941 -138770913 + MER41D LTR ERV1 1 276 -281 2349 104 0 0 chr2 111916941 111917238 -138770616 + AluSg SINE Alu 1 297 -13 3057 157 8 60 chr2 111917238 111917367 -138770487 + MER41D LTR ERV1 276 410 -147 2047 128 14 3 chr2 111917367 111917663 -138770191 + AluJb SINE Alu 3 301 -11 3057 157 8 60 chr2 111917663 111917856 -138769998 + MER41D LTR ERV1 410 557 0 3310 217 70 55 chr2 111917856 111919639 -138768215 + L1MC3 LINE L1 4265 6151 -15 45 19 0 0 chr2 111919641 111919693 -138768161 + AT_rich Low_complexity Low_complexity 1 52 0 1641 215 99 0 chr2 111919930 111920354 -138767500 - MLT1C LTR MaLR 0 467 2 219 204 23 0 chr2 111921677 111921721 -138766133 + T-rich Low_complexity Low_complexity 3 47 0 273 75 0 0 chr2 111922097 111922137 -138765717 + (TG)n Simple_repeat Simple_repeat 1 40 0 2224 98 0 38 chr2 111922173 111922488 -138765366 - AluSq SINE Alu -10 303 1 201 209 0 23 chr2 111923619 111923662 -138764192 - L2 LINE L2 -22 3250 3209 212 250 0 0 chr2 111923948 111923988 -138763866 + (CA)n Simple_repeat Simple_repeat 2 41 0 188 306 141 41 chr2 111924020 111924190 -138763664 + L2 LINE L2 2905 3091 -181 2166 125 7 0 chr2 111924399 111924702 -138763152 + AluSx SINE Alu 3 307 -5 246 304 0 0 chr2 111926301 111926370 -138761484 + C-rich Low_complexity Low_complexity 4 72 0 5748 246 79 38 chr2 111928110 111928320 -138759534 - L1ME2 LINE L1 -9 6224 6024 1844 174 0 10 chr2 111928320 111928631 -138759223 + AluJo SINE Alu 1 308 -4 5748 246 79 38 chr2 111928631 111931006 -138756848 - L1ME2 LINE L1 -209 6024 3470 2301 108 7 0 chr2 111931006 111931312 -138756542 - AluSx SINE Alu -4 308 1 5748 246 79 38 chr2 111931312 111932009 -138755845 - L1ME2 LINE L1 -2763 3470 2803 1168 150 53 5 chr2 111932099 111932306 -138755548 - Tigger1 DNA MER2_type 0 2418 2202 802 186 14 7 chr2 111932304 111932449 -138755405 - Tigger1 DNA MER2_type -2271 147 2 * 1611 282 88 48 chr2 111932603 111933812 -138754042 - L1ME2 LINE L1 -4480 1916 660 2353 107 7 0 chr2 111934186 111934496 -138753358 - AluSx SINE Alu 0 312 1 4158 230 66 31 chr2 111934605 111936495 -138751359 + L1MC4a LINE L1 5116 7203 -605 348 321 30 0 chr2 111936495 111936626 -138751228 + MIR3 SINE MIR 58 192 -16 234 232 36 0 chr2 111936671 111936727 -138751127 + CT-rich Low_complexity Low_complexity 1 58 0 2305 120 0 0 chr2 111936870 111937171 -138750683 + AluSx SINE Alu 1 301 -11 2442 87 0 10 chr2 111940149 111940461 -138747393 - AluSg SINE Alu -1 309 1 1215 169 29 0 chr2 111940738 111940945 -138746909 + MER46A DNA MER2_type 1 213 -23 21 0 0 0 chr2 111940952 111940973 -138746881 + AT_rich Low_complexity Low_complexity 1 21 0 251 261 9 87 chr2 111941081 111941196 -138746658 + L1ME LINE L1 5507 5612 -509 931 219 328 22 chr2 111941405 111941820 -138746034 - MLT1F LTR MaLR 0 542 1 600 286 39 60 chr2 111941877 111942160 -138745694 - MLT1F-int LTR MaLR -72 1299 1023 261 0 0 0 chr2 111942312 111942341 -138745513 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 340 335 19 26 chr2 111942381 111942536 -138745318 - MLT1F-int LTR MaLR -493 878 725 1667 218 53 31 chr2 111942806 111943256 -138744598 + MLT1C LTR MaLR 8 467 0 612 254 40 36 chr2 111943315 111943567 -138744287 - MLT1F-int LTR MaLR -828 543 291 1431 211 132 57 chr2 111943721 111944214 -138743640 - MLT1F LTR MaLR 0 542 13 1785 203 24 13 chr2 111944313 111944692 -138743162 + MLT1B LTR MaLR 8 390 0 1809 151 21 7 chr2 111945671 111945955 -138741899 - AluJo SINE Alu -24 288 1 358 353 29 20 chr2 111946002 111946246 -138741608 - HAL1b LINE L1 -651 697 452 2385 109 0 0 chr2 111948204 111948508 -138739346 - AluSx SINE Alu -8 304 1 27 81 0 0 chr2 111948599 111948661 -138739193 + AT_rich Low_complexity Low_complexity 1 62 0 431 273 152 0 chr2 111948662 111948851 -138739003 - MIR SINE MIR -3 259 45 292 155 0 0 chr2 111948971 111949024 -138738830 - MIR SINE MIR -55 153 101 28 29 0 0 chr2 111949806 111949841 -138738013 + AT_rich Low_complexity Low_complexity 1 35 0 3238 214 42 10 chr2 111949843 111950566 -138737288 + L1ME2 LINE L1 5400 6145 -19 273 283 121 10 chr2 111951290 111951389 -138736465 + L2 LINE L2 3194 3303 -10 23 0 0 0 chr2 111952219 111952242 -138735612 + AT_rich Low_complexity Low_complexity 1 23 0 566 273 137 36 chr2 111952246 111953026 -138734828 + L1ME3 LINE L1 3083 3955 -2191 240 204 0 0 chr2 111953083 111953137 -138734717 + AluJ/monomer SINE Alu 246 299 -3 246 275 146 10 chr2 111953173 111953468 -138734386 + L1ME3 LINE L1 4106 4440 -1706 1568 142 7 33 chr2 111953638 111953665 -138734189 - L1MB3 LINE L1 -22 6161 6135 2166 120 13 0 chr2 111953665 111953964 -138733890 - AluSq SINE Alu -10 303 1 1568 142 7 33 chr2 111953964 111954210 -138733644 - L1MB3 LINE L1 -48 6135 5895 * 1583 261 95 32 chr2 111954183 111954831 -138733023 + L1ME3 LINE L1 4585 5191 -971 333 0 0 0 chr2 111954831 111954868 -138732986 + (CA)n Simple_repeat Simple_repeat 2 38 0 1583 261 95 32 chr2 111954868 111955206 -138732648 + L1ME3 LINE L1 5191 5506 -656 433 209 57 167 chr2 111955206 111955276 -138732578 - MER112 DNA MER1_type -1 255 179 1920 140 7 10 chr2 111955276 111955569 -138732285 - AluJb SINE Alu -20 292 1 433 209 57 167 chr2 111955569 111955780 -138732074 - MER112 DNA MER1_type -77 179 5 1583 261 95 32 chr2 111955780 111956078 -138731776 + L1ME3 LINE L1 5506 5951 -211 1036 183 91 10 chr2 111956097 111956305 -138731549 + MIR SINE MIR 20 244 -18 677 208 117 54 chr2 111957163 111957412 -138730442 + MLT1H LTR MaLR 282 549 0 338 296 78 56 chr2 111957471 111957741 -138730113 - L1ME4a LINE L1 -207 5914 5639 234 295 166 16 chr2 111957756 111957949 -138729905 + MER20B DNA MER1_type 1 222 -561 243 338 0 0 chr2 111957974 111958051 -138729803 + MLT1I LTR MaLR 23 99 -310 745 208 160 11 chr2 111958149 111958418 -138729436 + MER20B DNA MER1_type 475 783 0 327 182 34 122 chr2 111959475 111959578 -138728276 - L1MD3 LINE L1 -15 7980 7892 2164 108 20 7 chr2 111959578 111959874 -138727980 + AluSx SINE Alu 1 300 -12 327 182 34 122 chr2 111959874 111959918 -138727936 - L1MD3 LINE L1 -103 7892 7846 1071 164 23 0 chr2 111960735 111960906 -138726948 - MER45A DNA AcHobo -3 175 1 501 155 10 29 chr2 111960972 111961075 -138726779 - MER53 DNA DNA -88 101 1 254 174 10 61 chr2 111961281 111961379 -138726475 + GA-rich Low_complexity Low_complexity 5 97 0 813 75 9 0 chr2 111961466 111961573 -138726281 + AluSg/x SINE Alu 196 303 -6 339 329 40 101 chr2 111961802 111962079 -138725775 - L2 LINE L2 -17 3255 2996 596 276 39 20 chr2 111962179 111962363 -138725491 - MIR SINE MIR -38 224 34 2156 96 18 0 chr2 111962363 111962643 -138725211 - AluSx SINE Alu -27 285 1 596 276 39 20 chr2 111962643 111962661 -138725193 - MIR SINE MIR -228 34 18 284 149 40 81 chr2 111962648 111962722 -138725132 - L2 LINE L2 -1 3271 3201 * 384 248 29 73 chr2 111963101 111963238 -138724616 + MLT1G LTR MaLR 460 590 0 359 281 12 87 chr2 111963779 111964021 -138723833 + MER102b DNA MER1_type 118 341 0 272 222 32 0 chr2 111964255 111964318 -138723536 + MLT1L LTR MaLR 210 274 -341 233 222 32 0 chr2 111964479 111964542 -138723312 + MLT1L LTR MaLR 546 610 -5 1215 209 90 59 chr2 111965279 111965633 -138722221 + MLT1A1 LTR MaLR 1 365 0 2563 62 7 0 chr2 111966308 111966615 -138721239 - AluY SINE Alu -2 309 1 423 323 58 14 chr2 111967042 111967333 -138720521 - HAL1 LINE L1 -677 1830 1527 296 243 68 14 chr2 111967354 111967428 -138720426 + MER5A DNA MER1_type 14 91 -98 397 292 120 59 chr2 111967491 111968117 -138719737 - HAL1 LINE L1 -981 1526 863 667 278 56 28 chr2 111968127 111968283 -138719571 + L1MC4 LINE L1 7742 7911 -131 222 62 0 0 chr2 111968283 111968315 -138719539 + (CA)n Simple_repeat Simple_repeat 1 32 0 667 278 56 28 chr2 111968315 111968446 -138719408 + L1MC4 LINE L1 7911 8037 -5 2095 168 55 0 chr2 111970073 111970419 -138717435 - MLT1A1 LTR MaLR 0 365 1 2999 142 65 79 chr2 111970628 111971042 -138716812 + MER68 LTR ERV1 1 406 -156 360 111 0 0 chr2 111971042 111971096 -138716758 + (TG)n Simple_repeat Simple_repeat 1 54 0 2999 142 65 79 chr2 111971096 111971251 -138716603 + MER68 LTR ERV1 406 562 0 503 258 15 8 chr2 111972270 111972402 -138715452 - L1MD2 LINE L1 -55 6304 6172 * 2169 199 21 7 chr2 111972398 111973031 -138714823 - L1MC/D LINE L1 -743 5797 5250 * 5284 235 30 27 chr2 111973028 111973884 -138713970 - L1MC/D LINE L1 -1941 4599 3734 2243 128 0 0 chr2 111973884 111974188 -138713666 - AluSx SINE Alu -7 305 2 5284 235 30 27 chr2 111974188 111974936 -138712918 - L1MC/D LINE L1 -2806 3734 2990 513 227 0 0 chr2 111975943 111976075 -138711779 - L1MC/D LINE L1 -3526 3014 2883 621 199 46 0 chr2 111976135 111976266 -138711588 - L1MC/D LINE L1 -4214 2326 2190 1713 207 69 21 chr2 111976277 111976756 -138711098 - L1MC/D LINE L1 -4992 1551 1050 912 273 71 72 chr2 111977436 111978044 -138709810 - L1MC/D LINE L1 -5900 640 34 298 261 0 0 chr2 111978120 111978185 -138709669 + Tigger3(Golem) DNA MER2_type 78 142 -2887 * 1408 174 0 48 chr2 111978183 111978238 -138709616 + Tigger3(Golem) DNA MER2_type 2773 2829 -200 5389 104 4 32 chr2 111978238 111979039 -138708815 + L1MA4A LINE L1 5526 6303 0 1408 174 0 48 chr2 111979039 111979253 -138708601 + Tigger3(Golem) DNA MER2_type 2829 3029 0 351 0 0 0 chr2 111980112 111980151 -138707703 + (CA)n Simple_repeat Simple_repeat 2 40 0 417 188 55 109 chr2 111981501 111981629 -138706225 - MIR SINE MIR -29 233 113 2715 103 19 8 chr2 111981702 111982062 -138705792 + THE1B LTR MaLR 1 364 0 194 298 0 0 chr2 111983427 111983474 -138704380 - MIR SINE MIR -110 152 106 320 251 65 69 chr2 111983482 111983713 -138704141 + L2 LINE L2 2890 3119 -194 219 186 0 0 chr2 111985558 111985601 -138702253 + (TG)n Simple_repeat Simple_repeat 1 43 0 2070 92 31 7 chr2 111985648 111985942 -138701912 - AluSx SINE Alu -11 301 1 1841 174 39 3 chr2 111985942 111986299 -138701555 + MLT1B LTR MaLR 21 390 0 1990 100 47 0 chr2 111987504 111987783 -138700071 + AluSg SINE Alu 12 303 -7 482 341 72 23 chr2 111987846 111988274 -138699580 - L2 LINE L2 -191 3081 2636 225 291 42 36 chr2 111988500 111988665 -138699189 + L1M4 LINE L1 1536 1701 -4841 1084 288 98 23 chr2 111989343 111989715 -138698139 + L1M4 LINE L1 2608 2950 -3694 1936 141 173 16 chr2 111989715 111990085 -138697769 + MSTA LTR MaLR 1 428 0 1084 288 98 23 chr2 111990085 111990372 -138697482 + L1M4 LINE L1 2950 3317 -3327 888 261 22 9 chr2 111990464 111990690 -138697164 + MIR SINE MIR 30 258 -4 2206 289 63 42 chr2 111990702 111990970 -138696884 + L1M4 LINE L1 3346 3607 -3037 1535 176 68 20 chr2 111990970 111991266 -138696588 + AluJo SINE Alu 1 310 -2 2206 289 63 42 chr2 111991266 111992512 -138695342 + L1M4 LINE L1 3607 4891 -1753 231 36 0 0 chr2 111992879 111992907 -138694947 + (TC)n Simple_repeat Simple_repeat 1 28 0 563 31 0 0 chr2 111993517 111993582 -138694272 - L1PA4 LINE L1 -79 6076 6012 767 12 0 0 chr2 111993582 111993664 -138694190 + L1PA3 LINE L1 6069 6152 -3 198 0 0 0 chr2 111993670 111993692 -138694162 + (TAAAAA)n Simple_repeat Simple_repeat 3 24 0 184 201 132 101 chr2 111993887 111994046 -138693808 + MIR SINE MIR 91 254 -8 225 0 0 0 chr2 111994987 111995012 -138692842 + (T)n Simple_repeat Simple_repeat 1 25 0 186 188 146 0 chr2 111996213 111996261 -138691593 - MIR SINE MIR -73 135 81 184 338 56 0 chr2 111996998 111997069 -138690785 - MIR SINE MIR -79 129 55 448 221 64 128 chr2 111997146 111997207 -138690647 + MIR SINE MIR 5 68 -194 6833 183 22 1 chr2 111997207 111999367 -138688487 + L1PA15 LINE L1 4026 6164 -1 1746 129 82 20 chr2 111999373 111999667 -138688187 + AluSx SINE Alu 1 312 0 448 221 64 128 chr2 111999667 111999840 -138688014 + MIR SINE MIR 73 232 -30 854 171 17 11 chr2 112000367 112000733 -138687121 + CT-rich Low_complexity Low_complexity 1 368 0 255 167 13 39 chr2 112000747 112000825 -138687029 + CT-rich Low_complexity Low_complexity 1 76 0 1729 137 42 21 chr2 112000825 112001110 -138686744 - AluSx SINE Alu -21 291 1 293 214 0 0 chr2 112001113 112001169 -138686685 + MIR SINE MIR 120 175 -87 1503 232 32 5 chr2 112001170 112002129 -138685725 - L1MEc LINE L1 -3683 2532 1481 803 179 39 34 chr2 112002129 112002308 -138685546 + LTR9 LTR ERV1 1 180 -432 432 213 9 19 chr2 112002316 112002424 -138685430 - L1MEc LINE L1 -6246 150 44 751 242 43 59 chr2 112003464 112003720 -138684134 - MER112 DNA MER1_type -8 252 1 1646 85 45 18 chr2 112003813 112004036 -138683818 + MER30 DNA MER1_type 2 230 0 343 248 88 7 chr2 112004322 112004459 -138683395 + L1ME4a LINE L1 5973 6120 -1 447 52 0 0 chr2 112004978 112005036 -138682818 + (TTCA)n Simple_repeat Simple_repeat 1 58 0 182 250 62 0 chr2 112005139 112005187 -138682667 - L2 LINE L2 -72 3200 3150 * 227 143 11 33 chr2 112005167 112005219 -138682635 + MIR SINE MIR 101 162 -46 345 299 109 7 chr2 112005780 112005917 -138681937 - MIR SINE MIR -29 233 83 361 227 11 23 chr2 112006245 112006333 -138681521 + MER21B LTR ERV1 1 87 -776 2258 214 71 98 chr2 112006354 112006641 -138681213 + MER21B LTR ERV1 18 311 -552 1699 104 5 0 chr2 112006641 112006862 -138680992 + AluSg/x SINE Alu 76 297 -15 2258 214 71 98 chr2 112006862 112007151 -138680703 + MER21B LTR ERV1 311 606 -257 1779 151 25 4 chr2 112007151 112007429 -138680425 + AluJo SINE Alu 1 284 -28 2258 214 71 98 chr2 112007429 112007578 -138680276 + MER21B LTR ERV1 606 722 -141 2077 140 20 60 chr2 112007578 112007929 -138679925 + MER1B DNA MER1_type 1 337 0 2258 214 71 98 chr2 112007929 112008015 -138679839 + MER21B LTR ERV1 722 809 -54 830 282 59 21 chr2 112010278 112010704 -138677150 + L1MC3 LINE L1 1989 2430 -3966 2644 233 59 20 chr2 112011313 112012007 -138675847 - L1ME2 LINE L1 -27 6137 5417 221 143 57 100 chr2 112012007 112012077 -138675777 + MIR SINE MIR 135 201 -61 * 312 307 22 66 chr2 112012022 112012159 -138675695 - MIR SINE MIR -57 151 21 2000 146 59 36 chr2 112012750 112013106 -138674748 - THE1B LTR MaLR 0 364 1 11804 102 22 8 chr2 112013106 112014664 -138673190 - THE1B-int LTR MaLR 0 1580 1 2316 122 36 31 chr2 112014666 112015026 -138672828 - THE1B LTR MaLR -2 362 1 310 269 19 29 chr2 112015305 112015409 -138672445 - L2 LINE L2 0 3313 3211 * 339 284 10 20 chr2 112015403 112015505 -138672349 + MIR SINE MIR 159 259 -3 2151 144 123 26 chr2 112016363 112016753 -138671101 + MSTA LTR MaLR 1 428 0 793 329 24 0 chr2 112017027 112017276 -138670578 - MIR SINE MIR 0 262 8 332 262 48 0 chr2 112017277 112017361 -138670493 - MIR SINE MIR -20 242 155 15460 120 33 19 chr2 112017368 112019729 -138668125 + Tigger1 DNA MER2_type 24 2418 0 2171 125 0 7 chr2 112019748 112020052 -138667802 - AluSq SINE Alu -11 302 1 246 246 88 29 chr2 112020068 112020176 -138667678 - MIR SINE MIR -75 133 24 1377 232 166 77 chr2 112021461 112022011 -138665843 + L1MC3 LINE L1 2516 3016 -3199 2251 96 0 3 chr2 112022011 112022303 -138665551 + AluY SINE Alu 1 291 -20 1377 232 166 77 chr2 112022303 112022699 -138665155 + L1MC3 LINE L1 3016 3546 -2669 1173 221 58 0 chr2 112022771 112023096 -138664758 + L1MC3 LINE L1 4465 4808 -1407 2925 226 28 55 chr2 112023127 112024137 -138663717 + L1MC3 LINE L1 5221 5472 -743 18892 85 6 2 chr2 112024137 112027402 -138660452 - L1PA7 LINE L1 -3 6151 2881 2662 242 108 65 chr2 112027402 112027976 -138659878 + L1ME2 LINE L1 3208 3756 -2390 2171 113 3 13 chr2 112027976 112028276 -138659578 + AluSx SINE Alu 1 297 -15 2662 242 108 65 chr2 112028276 112028301 -138659553 + L1ME2 LINE L1 3756 3778 -2368 417 39 0 0 chr2 112028301 112028352 -138659502 + (CA)n Simple_repeat Simple_repeat 2 52 0 2662 242 108 65 chr2 112028352 112028582 -138659272 + L1ME2 LINE L1 3778 3997 -2149 1798 62 0 103 chr2 112028582 112028872 -138658982 + L1MA1 LINE L1 6043 6302 0 2662 242 108 65 chr2 112028872 112029501 -138658353 + L1ME2 LINE L1 3997 4734 -1412 8115 197 57 14 chr2 112029526 112029702 -138658152 - L1MB7 LINE L1 -10 6174 6007 2113 169 101 5 chr2 112029702 112030087 -138657767 + MSTB LTR MaLR 1 422 -4 8115 197 57 14 chr2 112030087 112032647 -138655207 - L1MB7 LINE L1 -177 6007 3316 3143 220 60 23 chr2 112032687 112033736 -138654118 + L1ME2 LINE L1 5076 6332 -2 246 252 193 25 chr2 112034125 112034244 -138653610 + MIR SINE MIR 20 158 -104 1386 199 67 73 chr2 112036304 112036676 -138651178 + MLT1A2 LTR MaLR 1 370 -4 220 290 65 47 chr2 112036832 112036939 -138650915 - L2 LINE L2 -24 3248 3140 232 186 0 17 chr2 112037056 112037115 -138650739 + T-rich Low_complexity Low_complexity 2 59 0 2326 90 3 3 chr2 112037146 112037447 -138650407 - AluSx SINE Alu -11 301 1 380 247 132 37 chr2 112037866 112038056 -138649798 + MER102a DNA MER1_type 95 302 -28 185 329 48 27 chr2 112038334 112038480 -138649374 + L2 LINE L2 2911 3059 -213 2721 183 31 8 chr2 112038647 112039160 -138648694 + MER74A LTR ERVL 34 558 0 1963 162 3 0 chr2 112041201 112041509 -138646345 - AluSx SINE Alu -3 309 1 2039 127 6 38 chr2 112041633 112041948 -138645906 - AluSx SINE Alu -1 311 7 357 93 0 0 chr2 112041999 112042053 -138645801 + (TG)n Simple_repeat Simple_repeat 1 54 0 477 276 20 20 chr2 112043082 112043234 -138644620 + MIR SINE MIR 2 153 -109 447 19 0 0 chr2 112043565 112043617 -138644237 + (TG)n Simple_repeat Simple_repeat 2 53 0 9739 216 75 21 chr2 112044560 112046006 -138641848 - L1MDa LINE L1 -1607 4933 3567 1380 155 203 75 chr2 112046006 112046355 -138641499 + MSTD LTR MaLR 1 394 -2 9739 216 75 21 chr2 112046355 112049567 -138638287 - L1MDa LINE L1 -2973 3567 26 540 303 48 31 chr2 112049976 112050449 -138637405 - L1ME LINE L1 -227 5894 5265 195 274 69 39 chr2 112051789 112051891 -138635963 + MIR3 SINE MIR 3 107 -101 843 165 129 46 chr2 112051987 112052181 -138635673 + L1MB7 LINE L1 68 277 -6582 513 265 34 5 chr2 112052174 112052378 -138635476 + L1MB7 LINE L1 2963 3172 -3785 * 4777 199 58 18 chr2 112052446 112054371 -138633483 + L1MB7 LINE L1 4988 6995 0 198 351 38 30 chr2 112055307 112055438 -138632416 - MIR SINE MIR -86 176 45 1698 161 0 17 chr2 112055939 112056230 -138631624 + AluJo SINE Alu 13 298 -14 1967 130 10 7 chr2 112057008 112057315 -138630539 + AluSx SINE Alu 1 308 -4 5769 136 46 17 chr2 112057603 112058948 -138628906 - Ricksha DNA DNA -58 3193 1710 597 182 25 25 chr2 112058937 112059058 -138628796 - Ricksha DNA DNA -1053 128 8 * 276 287 0 11 chr2 112059087 112059174 -138628680 - L1ME3A LINE L1 -240 5930 5845 1122 246 29 3 chr2 112059190 112059675 -138628179 + MER34 LTR ERV1 11 542 0 457 338 71 29 chr2 112059688 112059928 -138627926 - L1MC4a LINE L1 -1978 5830 5581 235 359 43 0 chr2 112060027 112060119 -138627735 - L2 LINE L2 -420 2894 2799 287 272 68 10 chr2 112060131 112060234 -138627620 + MER94 DNA DNA 17 125 -9 1975 149 7 0 chr2 112060277 112060579 -138627275 + AluSx SINE Alu 1 304 -8 3100 222 35 36 chr2 112061153 112062452 -138625402 + L1ME1 LINE L1 4864 6161 -5 307 208 0 0 chr2 112062733 112062786 -138625068 - L1MC4 LINE L1 -1338 6704 6652 225 184 0 20 chr2 112062791 112062840 -138625014 + L1 LINE L1 4900 4947 -1199 858 214 36 18 chr2 112063104 112063272 -138624582 - AluJb SINE Alu -28 284 114 355 280 176 44 chr2 112063273 112063569 -138624285 + L1MC4a LINE L1 5574 5797 -324 2185 95 3 19 chr2 112063741 112064056 -138623798 - AluSx SINE Alu -2 310 1 539 288 89 69 chr2 112064459 112064831 -138623023 - L1MEd LINE L1 -4733 1577 1214 2149 92 7 10 chr2 112064831 112065136 -138622718 - AluSg1 SINE Alu 0 309 6 539 288 89 69 chr2 112065136 112065148 -138622706 - L1MEd LINE L1 -5096 1214 1204 1976 134 0 7 chr2 112065148 112065438 -138622416 - AluSx SINE Alu -24 288 1 539 288 89 69 chr2 112065438 112065731 -138622123 - L1MEd LINE L1 -5106 1204 865 632 243 33 44 chr2 112066976 112067157 -138620697 + L2 LINE L2 3134 3312 -1 296 250 23 45 chr2 112068133 112068221 -138619633 - MIR SINE MIR -62 146 61 315 247 0 45 chr2 112069024 112069113 -138618741 - MER5A DNA MER1_type -35 154 70 234 311 22 11 chr2 112070376 112070466 -138617388 + MIR SINE MIR 138 228 -34 516 288 51 63 chr2 112071543 112071865 -138615989 + MLT1H1 LTR MaLR 2 364 -231 304 239 49 2 chr2 112071893 112071994 -138615860 + MLT1G1 LTR MaLR 486 595 0 306 274 29 39 chr2 112073390 112073492 -138614362 - MER5A DNA MER1_type -9 180 80 237 264 110 0 chr2 112073649 112073740 -138614114 + MER3 DNA MER1_type 1 101 -108 208 241 17 17 chr2 112074167 112074225 -138613629 + MIR SINE MIR 2 59 -203 575 293 50 6 chr2 112074740 112074921 -138612933 + MIR SINE MIR 68 256 -6 1786 163 0 7 chr2 112075029 112075329 -138612525 + AluJb SINE Alu 1 298 -14 2129 107 0 0 chr2 112075859 112076149 -138611705 + AluSg SINE Alu 1 290 -20 287 301 0 0 chr2 112077110 112077193 -138610661 + (TGAG)n Simple_repeat Simple_repeat 3 85 0 300 243 254 21 chr2 112077983 112078172 -138609682 + L1MC4a LINE L1 5744 5976 -1832 24 53 0 0 chr2 112078311 112078349 -138609505 + AT_rich Low_complexity Low_complexity 1 38 0 324 290 20 30 chr2 112080268 112080368 -138607486 + MIR SINE MIR 33 131 -77 998 254 110 33 chr2 112080380 112080833 -138607021 - L1ME4a LINE L1 0 6121 5634 264 304 69 39 chr2 112080889 112081093 -138606761 - MER102a DNA MER1_type -6 324 115 645 169 0 108 chr2 112081437 112081585 -138606269 - FLAM_C SINE Alu 0 133 2 823 119 0 107 chr2 112082778 112082937 -138604917 - AluSg/x SINE Alu -22 288 147 2087 111 0 26 chr2 112083501 112083807 -138604047 + AluSx SINE Alu 1 298 -14 363 303 58 75 chr2 112085849 112085896 -138601958 + L1MC5 LINE L1 7743 7789 -172 1781 153 0 22 chr2 112085896 112086174 -138601680 + AluJb SINE Alu 3 275 -37 231 36 0 0 chr2 112086174 112086202 -138601652 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 1781 153 0 22 chr2 112086202 112086237 -138601617 + AluJb SINE Alu 275 309 -3 363 303 58 75 chr2 112086237 112086377 -138601477 + L1MC5 LINE L1 7789 7927 -34 874 267 111 39 chr2 112086493 112086927 -138600927 + MLT1L LTR MaLR 150 614 -1 3362 160 55 2 chr2 112087100 112087664 -138600190 - MER44D DNA MER2_type 0 605 140 267 231 0 0 chr2 112087667 112087719 -138600135 + LTR30 LTR ERV1 1 52 -670 903 144 11 193 chr2 112087719 112088004 -138599850 + LTR12 LTR ERV1 53 285 -429 344 216 31 21 chr2 112088004 112088101 -138599753 + LTR30 LTR ERV1 552 649 -73 705 104 0 0 chr2 112088101 112088197 -138599657 + LTR12 LTR ERV1 619 714 0 719 213 29 0 chr2 112088197 112088333 -138599521 - MER44D DNA MER2_type -565 140 1 390 287 65 0 chr2 112088521 112088629 -138599225 + MIR SINE MIR 78 192 -70 258 179 0 0 chr2 112089768 112089824 -138598030 + (CA)n Simple_repeat Simple_repeat 1 56 0 211 267 0 0 chr2 112089923 112089968 -138597886 + L2 LINE L2 3228 3272 0 21 0 0 0 chr2 112089985 112090006 -138597848 + AT_rich Low_complexity Low_complexity 1 21 0 803 194 75 15 chr2 112090566 112090767 -138597087 - MER20 DNA MER1_type -4 215 3 3097 190 82 77 chr2 112092720 112093622 -138594232 - L1ME1 LINE L1 -5 6161 5255 313 256 33 0 chr2 112094574 112094664 -138593190 + MIR SINE MIR 95 187 -75 1496 96 5 9 chr2 112094912 112095130 -138592724 + AluSg SINE Alu 61 277 -33 251 27 0 27 chr2 112095130 112095167 -138592687 + (CAA)n Simple_repeat Simple_repeat 1 36 0 286 268 0 14 chr2 112096772 112096914 -138590940 + (CA)n Simple_repeat Simple_repeat 1 140 0 331 288 55 14 chr2 112096927 112097073 -138590781 + (CATG)n Simple_repeat Simple_repeat 3 154 0 29 70 0 0 chr2 112097655 112097712 -138590142 + AT_rich Low_complexity Low_complexity 1 57 0 389 298 87 12 chr2 112098086 112098247 -138589607 - MER102a DNA MER1_type -154 176 4 298 171 92 26 chr2 112099135 112099211 -138588643 + MIR SINE MIR 107 187 -75 541 136 11 0 chr2 112099229 112099317 -138588537 + MER5A DNA MER1_type 26 114 -75 4765 157 27 25 chr2 112101449 112102339 -138585515 - L1MD1 LINE L1 0 6242 5351 1174 190 58 82 chr2 112103135 112103592 -138584262 - MER39 LTR ERV1 0 707 67 674 178 0 0 chr2 112103973 112104080 -138583774 - FLAM_C SINE Alu -35 108 2 192 281 37 61 chr2 112104817 112104899 -138582955 - L2 LINE L2 -648 2666 2587 2249 109 3 0 chr2 112105297 112105608 -138582246 - AluSx SINE Alu 0 312 1 1538 153 22 104 chr2 112105816 112106182 -138581672 - MLT1A1 LTR MaLR 0 365 30 1966 233 29 42 chr2 112106286 112106803 -138581051 - L1MD1 LINE L1 -962 5184 4662 284 0 28 0 chr2 112106803 112106839 -138581015 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2056 99 0 0 chr2 112106840 112107113 -138580741 - AluSx SINE Alu -39 273 1 1966 233 29 42 chr2 112107113 112107219 -138580635 - L1MD1 LINE L1 -1483 4663 4567 202 267 0 0 chr2 112109754 112109814 -138578040 + (CA)n Simple_repeat Simple_repeat 2 61 0 336 48 0 0 chr2 112109913 112109955 -138577899 + (TG)n Simple_repeat Simple_repeat 1 42 0 2654 177 18 6 chr2 112110555 112111052 -138576802 + L1MB3 LINE L1 5551 6053 -130 491 271 42 42 chr2 112111152 112111267 -138576587 - L1M4 LINE L1 -894 5252 5135 2765 22 0 0 chr2 112111267 112111583 -138576271 - AluYb8 SINE Alu -2 316 1 491 271 42 42 chr2 112111583 112111659 -138576195 - L1M4 LINE L1 -1010 5136 5061 557 200 282 6 chr2 112111660 112111793 -138576061 - AluJo SINE Alu -15 297 202 183 42 0 0 chr2 112111793 112111817 -138576037 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 557 200 282 6 chr2 112111817 112111853 -138576001 - AluJo SINE Alu -110 202 81 3692 234 71 14 chr2 112111853 112112927 -138574927 - L1M4 LINE L1 -1094 5052 3918 2273 75 0 0 chr2 112113007 112113301 -138574553 + AluY SINE Alu 1 294 -17 200 206 0 0 chr2 112113448 112113482 -138574372 + polypurine Low_complexity Low_complexity 3 36 0 2204 102 3 0 chr2 112114729 112115023 -138572831 + AluSp SINE Alu 1 295 -18 583 282 63 6 chr2 112115087 112115261 -138572593 + MIR SINE MIR 60 243 -19 322 277 109 74 chr2 112115344 112115568 -138572286 + L1ME4a LINE L1 5511 5753 -368 1710 175 0 3 chr2 112115568 112115854 -138572000 + AluJb SINE Alu 1 285 -27 322 277 109 74 chr2 112115854 112115979 -138571875 + L1ME4a LINE L1 5753 5872 -249 222 174 0 0 chr2 112117055 112117101 -138570753 + A-rich Low_complexity Low_complexity 1 46 0 375 308 138 6 chr2 112117338 112117497 -138570357 - MIR SINE MIR -17 245 66 2764 254 35 42 chr2 112118314 112119331 -138568523 + L1MC3 LINE L1 3 1012 -5058 8875 183 54 35 chr2 112119336 112120573 -138567281 + L1MC3 LINE L1 4417 5629 -2090 2189 98 7 0 chr2 112120573 112120869 -138566985 - AluSx SINE Alu -14 298 1 8875 183 54 35 chr2 112120869 112122125 -138565729 + L1MC3 LINE L1 5629 7031 -688 286 214 0 0 chr2 112122125 112122181 -138565673 + MLT1F1 LTR MaLR 35 90 -477 267 122 41 0 chr2 112122184 112122233 -138565621 + L1MC3 LINE L1 7117 7167 -552 254 303 0 13 chr2 112123677 112123753 -138564101 + MIR SINE MIR 24 98 -164 406 286 35 47 chr2 112123792 112123963 -138563891 - MIR SINE MIR -33 229 61 228 366 43 55 chr2 112124023 112124187 -138563667 + MIR SINE MIR 98 259 -3 305 318 45 8 chr2 112124490 112124622 -138563232 + L2 LINE L2 2684 2820 -494 510 295 118 17 chr2 112124670 112124907 -138562947 - L3 LINE CR1 -331 1246 986 351 308 19 10 chr2 112125231 112125335 -138562519 - L1MC4 LINE L1 -1324 6718 6614 318 192 0 0 chr2 112125335 112125387 -138562467 - L1MC4 LINE L1 -1339 6703 6652 261 0 0 0 chr2 112125387 112125416 -138562438 + (CA)n Simple_repeat Simple_repeat 2 30 0 2136 94 10 7 chr2 112125430 112125727 -138562127 - AluSx SINE Alu -14 298 1 180 0 0 0 chr2 112125867 112125887 -138561967 + (A)n Simple_repeat Simple_repeat 1 20 0 196 291 0 0 chr2 112126729 112126784 -138561070 - L2 LINE L2 -4 3268 3214 260 316 131 0 chr2 112126869 112127037 -138560817 - L2 LINE L2 -216 3056 2867 1043 154 6 2 chr2 112127546 112127871 -138559983 + (TCCA)n Simple_repeat Simple_repeat 1 505 0 341 232 137 11 chr2 112127875 112127970 -138559884 - L2 LINE L2 -18 3254 3148 2743 101 8 11 chr2 112128502 112128878 -138558976 + THE1C LTR MaLR 1 375 0 558 324 17 12 chr2 112129897 112130070 -138557784 + MIR SINE MIR 89 262 0 2294 74 6 3 chr2 112131218 112131530 -138556324 + L1PA14 LINE L1 5847 6159 -2 510 17 0 0 chr2 112132054 112132113 -138555741 + (TG)n Simple_repeat Simple_repeat 1 59 0 2606 105 11 5 chr2 112132705 112133078 -138554776 + THE1C LTR MaLR 1 375 0 680 119 60 0 chr2 112133181 112133349 -138554505 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 404 341 7 0 chr2 112134855 112134990 -138552864 - L2 LINE L2 0 3272 3137 394 208 52 0 chr2 112135427 112135523 -138552331 + MER5A DNA MER1_type 35 135 -54 265 385 45 32 chr2 112135829 112136050 -138551804 + L3b LINE CR1 1124 1347 -236 186 167 0 0 chr2 112136435 112136471 -138551383 + (CAA)n Simple_repeat Simple_repeat 2 37 0 294 305 19 19 chr2 112136564 112136669 -138551185 - MIR SINE MIR -63 145 41 4371 165 44 28 chr2 112138843 112139558 -138548296 - L1MB7 LINE L1 0 6184 5482 1990 141 0 0 chr2 112139558 112139855 -138547999 + AluSx SINE Alu 5 301 -11 4371 165 44 28 chr2 112139855 112140657 -138547197 - L1MB7 LINE L1 -702 5482 4647 1991 125 36 9 chr2 112140812 112141149 -138546705 - L1MA6 LINE L1 -1 6299 5954 681 84 0 0 chr2 112141161 112141256 -138546598 - L1PA13 LINE L1 -2 6161 6067 321 322 34 43 chr2 112141627 112141953 -138545901 + L1ME4a LINE L1 5732 6054 -67 216 259 0 19 chr2 112143167 112143221 -138544633 + CT-rich Low_complexity Low_complexity 3 55 0 970 210 44 59 chr2 112143288 112143559 -138544295 + MLT1B LTR MaLR 3 269 -121 853 147 23 0 chr2 112143570 112143699 -138544155 - LTR12 LTR ERV1 -234 480 349 243 177 145 0 chr2 112143699 112143761 -138544093 - LTR30 LTR ERV1 -108 614 544 407 177 211 57 chr2 112143761 112143936 -138543918 - LTR12 LTR ERV1 -437 277 76 * 1219 137 22 112 chr2 112143912 112144199 -138543655 - LTR12 LTR ERV1 -484 230 7 775 156 59 7 chr2 112144199 112144334 -138543520 + MLT1B LTR MaLR 321 462 -5 2341 44 0 0 chr2 112145307 112145582 -138542272 + AluY SINE Alu 23 297 -14 479 279 44 32 chr2 112148186 112148344 -138539510 + MIR SINE MIR 71 230 -32 239 211 0 26 chr2 112149026 112149102 -138538752 + GA-rich Low_complexity Low_complexity 2 75 0 205 322 23 11 chr2 112350540 112350627 -138337227 - L2 LINE L2 0 3313 3226 2117 129 79 15 chr2 112351585 112351925 -138335929 - THE1B LTR MaLR -2 362 1 371 250 173 6 chr2 112352107 112352275 -138335579 - L2 LINE L2 -773 2541 2346 324 172 0 78 chr2 112353101 112353165 -138334689 - L1M4 LINE L1 -2593 3553 3495 * 6830 67 3 0 chr2 112353159 112354028 -138333826 - L1PA5 LINE L1 -2 6152 5281 674 336 24 34 chr2 112354774 112355152 -138332702 - L2 LINE L2 -4 3309 2936 190 326 34 11 chr2 112355249 112355338 -138332516 - L2 LINE L2 -481 2833 2743 1010 293 43 14 chr2 112355854 112356205 -138331649 - L1MEc LINE L1 -5725 671 311 1243 236 25 39 chr2 112356205 112356236 -138331618 + L1MEc LINE L1 737 767 -5629 803 139 0 0 chr2 112356236 112356382 -138331472 + FLAM_C SINE Alu 2 147 0 1243 236 25 39 chr2 112356382 112356784 -138331070 + L1MEc LINE L1 767 1166 -5230 324 280 112 0 chr2 112356887 112356994 -138330860 - MIR SINE MIR -21 241 123 745 208 143 0 chr2 112357037 112357191 -138330663 - MER45A DNA AcHobo -1 177 2 180 0 0 0 chr2 112357653 112357673 -138330181 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1553 247 52 46 chr2 112358362 112358925 -138328929 - L1ME1 LINE L1 -5 6161 5596 183 295 0 39 chr2 112360446 112360524 -138327330 + L2 LINE L2 3227 3301 -12 26 30 0 0 chr2 112361705 112361738 -138326116 + AT_rich Low_complexity Low_complexity 1 33 0 2090 126 3 3 chr2 112362342 112362636 -138325218 - AluSx SINE Alu -18 294 1 1774 163 0 4 chr2 112362903 112363179 -138324675 - AluJb SINE Alu -2 310 36 426 252 50 14 chr2 112363464 112363603 -138324251 + MIR3 SINE MIR 18 161 -47 326 308 87 5 chr2 112363679 112363864 -138323990 - MIR SINE MIR -15 247 48 309 82 0 0 chr2 112364026 112364075 -138323779 + (GA)n Simple_repeat Simple_repeat 2 50 0 328 359 47 0 chr2 112366002 112366172 -138321682 - MIR SINE MIR -27 235 58 583 251 17 17 chr2 112367891 112368066 -138319788 + MIR SINE MIR 55 229 -33 2527 263 63 29 chr2 112368603 112370069 -138317785 - L1ME3A LINE L1 -22 6148 4620 324 0 0 0 chr2 112370069 112370105 -138317749 + (CA)n Simple_repeat Simple_repeat 2 37 0 2527 263 63 29 chr2 112370105 112370238 -138317616 - L1ME3A LINE L1 -1550 4620 4493 200 272 154 22 chr2 112370567 112370703 -138317151 - MIR SINE MIR -69 193 40 1788 234 47 103 chr2 112370734 112371504 -138316350 + MER21B LTR ERV1 13 739 -124 924 183 24 0 chr2 112372060 112372229 -138315625 - FRAM SINE Alu -10 166 1 507 279 20 0 chr2 112372720 112372867 -138314987 - MIR SINE MIR -57 205 56 448 315 36 6 chr2 112373527 112373692 -138314162 - MIR SINE MIR -69 193 24 223 242 83 75 chr2 112373696 112373816 -138314038 + MIR3 SINE MIR 67 187 -21 195 42 0 0 chr2 112373863 112373887 -138313967 + (A)n Simple_repeat Simple_repeat 1 24 0 182 244 0 0 chr2 112374985 112375030 -138312824 + MIR SINE MIR 164 208 -54 672 260 55 55 chr2 112376225 112376517 -138311337 + MER102b DNA MER1_type 1 292 -49 335 250 0 7 chr2 112377639 112377783 -138310071 + (ATGGTG)n Simple_repeat Simple_repeat 4 146 0 327 309 0 0 chr2 112377847 112378025 -138309829 + (TGG)n Simple_repeat Simple_repeat 1 178 0 2354 112 19 27 chr2 112378153 112378520 -138309334 - THE1B LTR MaLR 0 364 1 3057 149 2 0 chr2 112379198 112379674 -138308180 + MER66A LTR ERV1 1 477 -1 333 68 0 0 chr2 112379789 112379833 -138308021 + (TG)n Simple_repeat Simple_repeat 1 44 0 1392 185 180 28 chr2 112379833 112380227 -138307627 - MLT2B1 LTR ERVL -64 456 3 235 294 88 37 chr2 112380552 112380688 -138307166 - L1ME4a LINE L1 -14 6107 5965 274 232 152 9 chr2 112380874 112380986 -138306868 - L2 LINE L2 -13 3300 3173 10406 57 12 57 chr2 112383192 112384642 -138303212 + SVA Other Other 1 1386 0 390 191 119 40 chr2 112384988 112385114 -138302740 - Charlie8 DNA MER1_type -2260 157 22 581 326 43 25 chr2 112385212 112385514 -138302340 + L1MC4a LINE L1 5522 5743 -378 2319 107 0 7 chr2 112385514 112385823 -138302031 + AluSx SINE Alu 1 307 -5 581 326 43 25 chr2 112385823 112385900 -138301954 + L1MC4a LINE L1 5743 5817 -304 27 0 0 0 chr2 112386487 112386514 -138301340 + AT_rich Low_complexity Low_complexity 1 27 0 2163 176 8 6 chr2 112386850 112387214 -138300640 + MLT1A1 LTR MaLR 1 365 0 181 314 0 0 chr2 112388543 112388594 -138299260 - L2 LINE L2 0 3272 3222 369 0 0 0 chr2 112389162 112389203 -138298651 + (TG)n Simple_repeat Simple_repeat 2 42 0 242 167 33 17 chr2 112390360 112390420 -138297434 + L2 LINE L2 3197 3257 -56 1915 134 7 17 chr2 112390779 112391069 -138296785 - AluJo SINE Alu -12 300 14 323 300 93 14 chr2 112391290 112391430 -138296424 - MLT1J2 LTR MaLR -24 426 276 1760 193 94 15 chr2 112392024 112392418 -138295436 + MLT1C LTR MaLR 6 430 -37 5779 133 27 54 chr2 112392807 112394017 -138293837 + pTR5 LTR ERV1 741 2076 -362 3361 196 76 34 chr2 112394169 112394397 -138293457 - L1MB4 LINE L1 -12 6404 6187 2395 101 3 0 chr2 112394397 112394704 -138293150 - AluSp SINE Alu -5 308 1 3361 196 76 34 chr2 112394704 112395683 -138292171 - L1MB4 LINE L1 -229 6187 5139 2252 118 0 0 chr2 112395683 112395979 -138291875 - AluSx SINE Alu -16 296 1 3361 196 76 34 chr2 112395979 112396006 -138291848 - L1MB4 LINE L1 -1277 5139 5115 353 248 36 29 chr2 112395986 112396123 -138291731 - L1MB4 LINE L1 -3464 2918 2781 * 1436 233 53 12 chr2 112396228 112396795 -138291059 - L1MB4 LINE L1 -3585 2797 2213 462 203 19 0 chr2 112396852 112397010 -138290844 + (TA)n Simple_repeat Simple_repeat 2 162 0 5521 227 62 35 chr2 112397011 112399297 -138288557 - L1M4c LINE L1 -4317 2508 8 207 0 0 0 chr2 112399357 112399380 -138288474 + (TA)n Simple_repeat Simple_repeat 1 23 0 2280 124 0 0 chr2 112399380 112399679 -138288175 - AluSx SINE Alu -5 307 9 359 290 8 8 chr2 112400281 112400412 -138287442 - L1MEc LINE L1 -4858 1538 1408 2552 57 0 0 chr2 112401324 112401622 -138286232 - AluY SINE Alu -13 298 1 228 354 21 0 chr2 112402203 112402299 -138285555 + MIR SINE MIR 41 138 -124 2693 10 0 10 chr2 112402830 112403142 -138284712 - AluYa5 SINE Alu -2 309 1 275 297 16 55 chr2 112404030 112404158 -138283696 + MIR SINE MIR 6 128 -134 699 98 11 0 chr2 112404159 112404251 -138283603 + MLT1B LTR MaLR 1 93 -297 249 191 0 0 chr2 112404247 112404289 -138283565 + MLT1B LTR MaLR 349 390 0 * 290 327 9 28 chr2 112404290 112404397 -138283457 + MIR SINE MIR 126 230 -32 1575 245 83 13 chr2 112404418 112404802 -138283052 - MLT1E2 LTR MaLR -1 625 215 699 196 0 21 chr2 112404810 112404953 -138282901 - FLAM_C SINE Alu 0 143 4 484 193 14 170 chr2 112404961 112405179 -138282675 - MLT1E2 LTR MaLR -442 184 1 288 0 0 0 chr2 112405536 112405568 -138282286 + (CA)n Simple_repeat Simple_repeat 2 33 0 464 254 108 49 chr2 112405683 112405868 -138281986 - MIR SINE MIR -7 255 60 2643 153 17 4 chr2 112406031 112406496 -138281358 + L1MB3 LINE L1 5713 6183 0 670 283 151 40 chr2 112407244 112407647 -138280207 - L1 LINE L1 -768 5378 4931 1626 150 3 51 chr2 112407665 112407979 -138279875 - AluJo SINE Alu -9 303 5 1399 307 108 33 chr2 112408086 112409029 -138278825 - L1 LINE L1 -2881 3265 2232 340 169 0 42 chr2 112409879 112409950 -138277904 - MLT1I LTR MaLR -262 147 80 326 221 13 13 chr2 112410013 112410090 -138277764 - HAL1 LINE L1 -853 1654 1578 1982 194 29 3 chr2 112410496 112410882 -138276972 + MSTD LTR MaLR 1 396 0 230 267 33 0 chr2 112411520 112411580 -138276274 - L2 LINE L2 -1 3271 3210 816 283 75 19 chr2 112413819 112414127 -138273727 + L1MDa LINE L1 20 344 -6196 2380 194 51 59 chr2 112414305 112414486 -138273368 + L1MDa LINE L1 1553 1734 -4806 2099 109 0 13 chr2 112414486 112414788 -138273066 + AluSx SINE Alu 1 298 -14 2380 194 51 59 chr2 112414788 112415337 -138272517 + L1MDa LINE L1 1734 2277 -4263 3119 207 35 35 chr2 112415337 112415436 -138272418 - L1MDa LINE L1 -2952 3588 3490 2115 105 0 3 chr2 112415436 112415732 -138272122 - AluSx SINE Alu -15 297 3 3119 207 35 35 chr2 112415732 112416483 -138271371 - L1MDa LINE L1 -3049 3491 2738 794 103 121 0 chr2 112416610 112416726 -138271128 - THE1B LTR MaLR -234 130 1 5594 211 59 24 chr2 112416730 112416985 -138270869 - L1MDa LINE L1 -4165 2375 2130 1820 155 57 35 chr2 112416985 112417352 -138270502 + THE1C LTR MaLR 1 375 0 5594 211 59 24 chr2 112417352 112419069 -138268785 - L1MDa LINE L1 -4410 2130 35 2132 79 0 0 chr2 112419118 112419398 -138268456 + AluY SINE Alu 24 303 -8 1880 89 30 0 chr2 112419842 112420111 -138267743 + L1P4 LINE L1 5310 5586 -588 443 176 33 0 chr2 112420250 112420341 -138267513 + FAM SINE Alu 86 179 -6 352 313 68 82 chr2 112420843 112421281 -138266573 + L3 LINE CR1 1142 1573 -4 373 259 141 53 chr2 112421809 112421893 -138265961 - MIR SINE MIR -1 261 186 2315 87 3 0 chr2 112421893 112422192 -138265662 - AluSp SINE Alu -13 300 1 373 259 141 53 chr2 112422192 112422277 -138265577 - MIR SINE MIR -76 186 77 549 14 0 29 chr2 112422475 112422545 -138265309 + L1P4 LINE L1 5651 5718 -450 269 250 0 0 chr2 112422536 112422608 -138265246 - L1ME3A LINE L1 -71 6099 6028 * 396 219 97 18 chr2 112422624 112422738 -138265116 - L1ME3A LINE L1 -192 5970 5848 277 204 148 0 chr2 112422785 112422873 -138264981 + MER63 DNA MER1_type 44 752 -84 394 175 0 21 chr2 112423418 112423515 -138264339 + GA-rich Low_complexity Low_complexity 1 95 0 6493 126 54 8 chr2 112423672 112424743 -138263111 - Tigger3b DNA MER2_type 0 1231 111 448 131 0 0 chr2 112425025 112425086 -138262768 - Tigger3(Golem) DNA MER2_type -42 2987 2927 * 480 202 0 20 chr2 112425075 112425174 -138262680 - Tigger3(Golem) DNA MER2_type -2912 117 21 285 279 13 25 chr2 112425904 112425983 -138261871 + MIR SINE MIR 20 97 -165 227 330 56 39 chr2 112426337 112426570 -138261284 - L1ME3A LINE L1 -345 5776 5540 222 206 0 0 chr2 112426823 112426886 -138260968 + A-rich Low_complexity Low_complexity 1 63 0 1672 178 9 52 chr2 112427515 112427858 -138259996 + MLT1B LTR MaLR 63 390 0 3021 105 12 0 chr2 112428328 112428748 -138259106 - MSTA LTR MaLR -2 426 2 1195 221 17 13 chr2 112428803 112429102 -138258752 + L1M4 LINE L1 3770 4069 -2077 187 167 28 0 chr2 112429113 112429149 -138258705 + L2 LINE L2 3031 3067 -246 1897 150 3 0 chr2 112429231 112429524 -138258330 + AluSx SINE Alu 1 294 -18 329 231 46 65 chr2 112430090 112430198 -138257656 + LTR48B LTR ERV1 1 106 -538 * 1138 243 43 82 chr2 112430165 112430479 -138257375 + MER39 LTR ERV1 260 552 -155 1958 151 3 0 chr2 112430479 112430790 -138257064 - AluSx SINE Alu 0 312 1 1138 243 43 82 chr2 112430790 112430941 -138256913 + MER39 LTR ERV1 552 707 0 1004 163 5 5 chr2 112431606 112431790 -138256064 - LTR37A LTR ERV1 -21 405 222 1580 77 5 0 chr2 112432330 112432539 -138255315 + AluY SINE Alu 102 311 0 278 345 104 32 chr2 112432600 112432722 -138255132 - L2 LINE L2 -1 3271 3159 1997 207 97 7 chr2 112432722 112433185 -138254669 + MLT1D LTR MaLR 1 505 0 278 345 104 32 chr2 112433185 112433378 -138254476 - L2 LINE L2 -113 3159 2933 3059 148 30 4 chr2 112434349 112434823 -138253031 - MER66B LTR ERV1 0 486 1 341 283 24 8 chr2 112436062 112436196 -138251658 - MLT1J LTR MaLR -5 597 389 186 318 30 0 chr2 112438598 112438664 -138249190 - MER5B DNA MER1_type -105 73 6 1893 198 25 14 chr2 112438775 112439143 -138248711 + MLT1C LTR MaLR 1 372 -95 7880 120 35 25 chr2 112439181 112439531 -138248323 + HSMAR2 DNA Mariner 2 347 -955 2053 107 3 39 chr2 112439531 112439841 -138248013 + AluSx SINE Alu 1 299 -13 7880 120 35 25 chr2 112439841 112440778 -138247076 + HSMAR2 DNA Mariner 347 1302 0 1893 197 60 26 chr2 112441262 112441714 -138246140 + MLT1C LTR MaLR 1 467 0 677 129 0 7 chr2 112445055 112445195 -138242659 + (TG)n Simple_repeat Simple_repeat 2 140 0 207 189 0 0 chr2 112445259 112445312 -138242542 + (TG)n Simple_repeat Simple_repeat 2 54 0 276 215 0 51 chr2 112445460 112445539 -138242315 - L2 LINE L2 -6 3266 3192 499 289 60 0 chr2 112445639 112445805 -138242049 - MLT1I LTR MaLR -2 407 232 793 223 12 8 chr2 112445894 112446063 -138241791 - MIR SINE MIR -67 141 10 2404 86 0 3 chr2 112447363 112447677 -138240177 + AluSp SINE Alu 1 313 0 255 250 15 15 chr2 112448074 112448142 -138239712 - L2 LINE L2 0 3313 3246 1322 237 37 59 chr2 112448265 112448640 -138239214 - MLT1A2 LTR MaLR 0 374 8 523 280 241 21 chr2 112448773 112449258 -138238596 - L2 LINE L2 -343 2971 2380 2778 139 59 49 chr2 112449270 112449567 -138238287 + MLT2B1 LTR ERVL 1 307 -213 2518 124 6 3 chr2 112449567 112449930 -138237924 + THE1B LTR MaLR 1 364 0 2778 139 59 49 chr2 112449930 112450144 -138237710 + MLT2B1 LTR ERVL 307 517 -3 186 323 121 0 chr2 112450207 112450306 -138237548 + L2 LINE L2 2241 2351 -963 226 380 50 8 chr2 112450363 112450484 -138237370 - MIR SINE MIR -41 221 96 8163 125 10 10 chr2 112451282 112452518 -138235336 - Tigger1 DNA MER2_type 0 2418 1183 212 0 0 35 chr2 112452526 112452555 -138235299 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 16895 26 15 0 chr2 112452555 112455311 -138232543 - L1PA4 LINE L1 -12 6143 3357 4320 28 0 5 chr2 112455311 112455876 -138231978 + L1PA4 LINE L1 2798 3359 -2787 6571 119 55 12 chr2 112455883 112456163 -138231691 - Tigger1 DNA MER2_type -1245 1173 907 2187 106 16 16 chr2 112456163 112456466 -138231388 - AluSq SINE Alu -10 303 1 6571 119 55 12 chr2 112456466 112457287 -138230567 - Tigger1 DNA MER2_type -1511 907 24 183 287 119 40 chr2 112457546 112457647 -138230207 + MIR SINE MIR 37 145 -63 627 265 101 48 chr2 112457969 112458327 -138229527 + MLT1J LTR MaLR 86 462 -49 430 272 82 57 chr2 112458532 112458690 -138229164 - MER91B DNA MER1_type 0 190 29 310 0 43 22 chr2 112459520 112459566 -138228288 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 439 280 37 26 chr2 112460109 112460298 -138227556 + MARNA DNA Mariner 288 478 -108 289 138 63 74 chr2 112460460 112460541 -138227313 + LTR30 LTR ERV1 229 302 -75 2137 120 15 0 chr2 112460541 112460875 -138226979 + pTR5 LTR ERV1 60 398 -2040 2293 120 0 0 chr2 112461451 112461760 -138226094 + AluSx SINE Alu 1 309 -3 2202 236 74 24 chr2 112462363 112462957 -138224897 - MLT1E3 LTR MaLR 0 624 1 3062 101 22 28 chr2 112463320 112463441 -138224413 - L1PB1 LINE L1 -1 6150 6030 2588 51 0 0 chr2 112463441 112463736 -138224118 - AluY SINE Alu -16 295 1 3062 101 22 28 chr2 112463736 112464078 -138223776 - L1PB1 LINE L1 -121 6030 5690 1834 177 53 28 chr2 112464274 112464630 -138223224 + MLT1A1 LTR MaLR 1 365 0 260 262 48 24 chr2 112465112 112465196 -138222658 + MIR SINE MIR 30 115 -147 302 266 47 89 chr2 112465905 112466074 -138221780 + MIR SINE MIR 27 188 -74 1285 242 44 19 chr2 112467424 112467788 -138220066 + MER20B DNA MER1_type 146 518 -265 207 374 137 15 chr2 112468283 112468414 -138219440 + MIR SINE MIR 35 181 -81 347 287 139 9 chr2 112468758 112468873 -138218981 + L2 LINE L2 3143 3272 0 889 158 11 0 chr2 112468876 112469053 -138218801 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 1470 239 62 52 chr2 112470155 112471828 -138216026 + L1MD2 LINE L1 3139 5026 -1120 2118 124 0 17 chr2 112471828 112472157 -138215697 + AluSx SINE Alu 1 324 0 1470 239 62 52 chr2 112472157 112472349 -138215505 + L1MD2 LINE L1 5026 5215 -931 1467 227 105 41 chr2 112472350 112472883 -138214971 - MLT1E3 LTR MaLR 0 624 58 2250 192 53 26 chr2 112472913 112473092 -138214762 + L1MD2 LINE L1 5208 5381 -978 2283 149 95 3 chr2 112473092 112473482 -138214372 + MSTB LTR MaLR 1 426 0 2250 192 53 26 chr2 112473482 112473883 -138213971 + L1MD2 LINE L1 5381 5798 -561 1886 96 27 109 chr2 112473883 112474249 -138213605 - MLT2D LTR ERVL 0 414 79 1137 97 0 7 chr2 112474250 112474395 -138213459 + AluYa5 SINE Alu 1 144 -167 2402 68 14 3 chr2 112474396 112474691 -138213163 + AluY SINE Alu 1 298 -13 518 159 0 0 chr2 112474691 112474779 -138213075 - MLT2D LTR ERVL -325 89 2 1752 189 149 79 chr2 112474779 112474898 -138212956 + L1MD2 LINE L1 5793 5902 -457 2110 128 0 17 chr2 112474898 112475196 -138212658 + AluSx SINE Alu 1 293 -19 1752 189 149 79 chr2 112475196 112475606 -138212248 + L1MD2 LINE L1 5902 6359 0 26 30 0 0 chr2 112476112 112476145 -138211709 + AT_rich Low_complexity Low_complexity 1 33 0 425 224 43 9 chr2 112476700 112476816 -138211038 - L1ME4a LINE L1 -204 5917 5798 279 0 0 0 chr2 112477001 112477032 -138210822 + (CA)n Simple_repeat Simple_repeat 2 32 0 1471 121 213 4 chr2 112477267 112477538 -138210316 + AluYa5 SINE Alu 1 301 0 2270 95 7 7 chr2 112477715 112478019 -138209835 + AluSx SINE Alu 1 304 -8 238 279 16 0 chr2 112478092 112478153 -138209701 - MIR SINE MIR 0 262 201 2201 136 0 0 chr2 112478389 112478697 -138209157 - AluSx SINE Alu -4 308 1 746 260 104 83 chr2 112478786 112479257 -138208597 + MLT1G LTR MaLR 1 480 -115 534 221 28 7 chr2 112479270 112479415 -138208439 + MER69 DNA AcHobo 1896 2043 -483 254 95 24 0 chr2 112479739 112479781 -138208073 + (GA)n Simple_repeat Simple_repeat 1 43 0 2235 127 0 9 chr2 112480658 112480973 -138206881 + AluJo SINE Alu 1 312 0 194 372 0 13 chr2 112481110 112481188 -138206666 + L2 LINE L2 3236 3312 -1 37 23 0 0 chr2 112482392 112482436 -138205418 + AT_rich Low_complexity Low_complexity 1 44 0 1824 152 30 14 chr2 112482441 112482737 -138205117 + AluJb SINE Alu 1 301 -11 2288 108 3 0 chr2 112484970 112485266 -138202588 - AluSx SINE Alu -15 297 1 206 297 144 27 chr2 112485347 112485458 -138202396 - MIR SINE MIR -118 144 21 1185 271 51 25 chr2 112486400 112486909 -138200945 + L1ME4a LINE L1 5551 6072 -49 353 230 105 26 chr2 112488833 112488985 -138198869 + MER103 DNA DNA 2 165 -1 3538 129 103 47 chr2 112489190 112489878 -138197976 + LTR8A LTR ERV1 1 727 0 653 246 66 0 chr2 112491069 112491252 -138196602 - MIR SINE MIR -67 195 1 2000 45 8 0 chr2 112491272 112491519 -138196335 + L1PA5 LINE L1 5906 6154 0 2483 87 0 3 chr2 112491663 112491974 -138195880 + AluSg SINE Alu 1 310 0 321 26 0 0 chr2 112493061 112493099 -138194755 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 1161 103 5 65 chr2 112493195 112493380 -138194474 - AluSg/x SINE Alu -9 301 128 585 309 19 29 chr2 112493523 112493733 -138194121 - MIR SINE MIR -21 241 34 2294 105 0 10 chr2 112495906 112496219 -138191635 - AluY SINE Alu -1 310 1 1904 144 10 7 chr2 112496335 112496633 -138191221 + AluJo SINE Alu 1 299 -13 888 158 0 33 chr2 112496830 112496982 -138190872 - AluJo SINE Alu -165 147 1 306 153 0 0 chr2 112498448 112498507 -138189347 + (TG)n Simple_repeat Simple_repeat 2 60 0 2162 103 0 14 chr2 112499235 112499526 -138188328 - AluSc SINE Alu -22 287 1 249 171 57 29 chr2 112499745 112499815 -138188039 - LTR37B LTR ERV1 -393 75 4 833 236 54 8 chr2 112500555 112500813 -138187041 - LTR37B LTR ERV1 -2 466 197 1968 169 26 0 chr2 112500847 112501149 -138186705 + AluSx SINE Alu 1 310 -2 589 177 0 15 chr2 112501151 112501281 -138186573 + GA-rich Low_complexity Low_complexity 3 130 0 * 692 132 0 8 chr2 112501251 112501372 -138186482 + (GGGGA)n Simple_repeat Simple_repeat 4 123 0 659 199 7 7 chr2 112501443 112501589 -138186265 - LTR37B LTR ERV1 -316 152 7 1380 307 97 30 chr2 112502327 112503280 -138184574 - L2 LINE L2 -1 3312 2290 271 300 0 0 chr2 112503919 112503979 -138183875 + L2 LINE L2 3202 3261 -11 198 0 0 0 chr2 112504136 112504158 -138183696 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 2125 217 76 16 chr2 112505911 112506452 -138181402 + L1ME1 LINE L1 5549 6129 -37 2134 116 23 13 chr2 112506452 112506762 -138181092 - AluSp SINE Alu 0 313 1 2125 217 76 16 chr2 112506762 112506796 -138181058 + L1ME1 LINE L1 6129 6159 -7 187 158 105 0 chr2 112508432 112508470 -138179384 + MIR SINE MIR 103 144 -118 2277 103 0 0 chr2 112508812 112509103 -138178751 + AluSx SINE Alu 1 291 -21 1662 184 21 37 chr2 112509569 112509949 -138177905 - MSTD LTR MaLR -22 374 1 590 274 84 0 chr2 112509965 112510155 -138177699 - MIR SINE MIR -20 242 37 219 36 0 0 chr2 112510860 112510888 -138176966 + (TTGG)n Simple_repeat Simple_repeat 2 29 0 983 178 0 0 chr2 112510890 112511047 -138176807 - FAM SINE Alu -18 157 1 2629 137 26 42 chr2 112511151 112511509 -138176345 + L1MB2 LINE L1 5442 5791 -392 2479 154 19 106 chr2 112511509 112511865 -138175989 - MLT2B1 LTR ERVL -2 518 228 2451 58 3 7 chr2 112511865 112512156 -138175698 - AluY SINE Alu -21 290 1 2479 154 19 106 chr2 112512156 112512365 -138175489 - MLT2B1 LTR ERVL -292 228 2 2629 137 26 42 chr2 112512365 112512511 -138175343 + L1MB2 LINE L1 5791 5938 -245 2880 118 16 36 chr2 112512511 112513127 -138174727 + MER4E LTR ERV1 2 766 0 1452 150 9 0 chr2 112513127 112513360 -138174494 + L1MB2 LINE L1 5934 6168 -3 453 192 48 56 chr2 112514401 112514526 -138173328 - MIR SINE MIR -41 221 98 2503 69 10 0 chr2 112515264 112515567 -138172287 + AluY SINE Alu 1 306 -5 222 261 194 56 chr2 112515663 112515843 -138172011 - MIR SINE MIR 0 262 58 248 350 10 10 chr2 112516256 112516359 -138171495 - MIR3 SINE MIR -17 191 89 491 322 174 35 chr2 112516859 112517810 -138170044 - L2 LINE L2 -10 3262 2121 2229 114 0 3 chr2 112517810 112518107 -138169747 + AluSx SINE Alu 1 296 -16 491 322 174 35 chr2 112518107 112518234 -138169620 - L2 LINE L2 -1151 2121 2013 578 224 126 79 chr2 112518589 112518843 -138169011 - L2 LINE L2 0 3313 3048 2363 121 0 10 chr2 112519687 112520001 -138167853 - AluSx SINE Alu -1 311 1 1926 157 13 0 chr2 112520211 112520488 -138167366 + AluJb SINE Alu 1 273 -39 693 0 0 0 chr2 112520488 112520565 -138167289 + (GAAAA)n Simple_repeat Simple_repeat 3 79 0 1926 157 13 0 chr2 112520565 112520577 -138167277 + AluJb SINE Alu 273 283 -29 225 65 0 0 chr2 112520577 112520608 -138167246 + (CAGG)n Simple_repeat Simple_repeat 4 34 0 1926 157 13 0 chr2 112520608 112520622 -138167232 + AluJb SINE Alu 283 309 -3 408 130 0 0 chr2 112520625 112520694 -138167160 + (GA)n Simple_repeat Simple_repeat 2 70 0 1097 84 11 11 chr2 112520703 112520881 -138166973 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 2264 116 3 6 chr2 112521174 112521485 -138166369 + AluSg SINE Alu 1 310 0 209 137 39 0 chr2 112521624 112521675 -138166179 + CT-rich Low_complexity Low_complexity 4 56 0 2525 84 3 0 chr2 112522801 112523110 -138164744 - AluSp SINE Alu -3 310 1 504 276 37 51 chr2 112523845 112524062 -138163792 - L1MEc LINE L1 -6144 252 39 2416 92 68 0 chr2 112524966 112525304 -138162550 + THE1B LTR MaLR 1 361 -3 22 56 0 0 chr2 112576020 112576056 -138111798 + AT_rich Low_complexity Low_complexity 1 36 0 946 171 5 43 chr2 112576062 112576249 -138111605 + AluJo SINE Alu 17 196 -116 312 272 58 13 chr2 112576249 112576391 -138111463 - L1M4 LINE L1 -747 5399 5249 252 202 39 67 chr2 112576418 112576474 -138111380 - L1M4 LINE L1 -957 5189 5135 2194 80 0 14 chr2 112576474 112576784 -138111070 - AluY SINE Alu 0 306 1 252 202 39 67 chr2 112576784 112576830 -138111024 - L1M4 LINE L1 -1011 5135 5089 323 237 224 39 chr2 112577692 112577848 -138110006 + LTR26B LTR ERV1 1 185 -346 1206 209 61 27 chr2 112577848 112577990 -138109864 + LTR26E LTR ERV1 316 452 -170 2459 91 0 0 chr2 112577990 112578299 -138109555 + AluY SINE Alu 1 309 -2 1206 209 61 27 chr2 112578299 112578453 -138109401 + LTR26E LTR ERV1 452 622 0 225 61 121 0 chr2 112579061 112579094 -138108760 - Charlie7 DNA MER1_type -1606 1006 970 2251 95 0 10 chr2 112579138 112579434 -138108420 - AluSx SINE Alu -19 293 1 2446 70 0 16 chr2 112580440 112580753 -138107101 + AluY SINE Alu 1 308 -3 1040 161 72 0 chr2 112581052 112581232 -138106622 - L1M4 LINE L1 -572 5606 5414 2325 89 0 22 chr2 112581387 112581703 -138106151 + AluSg1 SINE Alu 1 309 0 278 293 107 14 chr2 112583072 112583212 -138104642 + MIR SINE MIR 54 206 -56 693 182 0 0 chr2 112583989 112584099 -138103755 - FLAM_C SINE Alu -32 111 2 412 294 136 15 chr2 112584143 112584415 -138103439 - HAL1 LINE L1 -487 2020 1716 231 231 8 60 chr2 112585553 112585670 -138102184 + (CCCCG)n Simple_repeat Simple_repeat 2 112 0 2390 57 0 10 chr2 112586582 112586879 -138100975 - AluSc SINE Alu -15 294 1 1343 126 0 0 chr2 112587584 112587766 -138100088 - AluJb SINE Alu -3 309 128 2073 134 0 0 chr2 112587863 112588153 -138099701 - AluSx SINE Alu -22 290 1 2043 163 0 0 chr2 112590214 112590520 -138097334 - AluSx SINE Alu -5 307 2 802 200 71 13 chr2 112591651 112591806 -138096048 + FAM SINE Alu 1 164 -21 2269 107 0 10 chr2 112592143 112592442 -138095412 + AluSx SINE Alu 1 296 -16 1055 96 0 0 chr2 112593493 112593628 -138094226 + AluSc SINE Alu 160 294 -15 713 289 110 10 chr2 112593928 112594229 -138093625 - L2 LINE L2 -2561 753 423 2094 108 42 7 chr2 112594330 112594616 -138093238 - AluSx SINE Alu -16 296 1 1359 203 122 29 chr2 112595336 112595681 -138092173 + MLT1G LTR MaLR 7 383 -207 377 179 115 0 chr2 112595682 112595760 -138092094 - MER58B DNA MER1_type -2 339 253 590 250 51 34 chr2 112595842 112596018 -138091836 + MLT1G LTR MaLR 409 587 -3 495 272 51 6 chr2 112596028 112596186 -138091668 - L2 LINE L2 -260 3053 2889 698 248 62 117 chr2 112596189 112596560 -138091294 + REP3 LTR ERV 1 334 -228 270 0 0 0 chr2 112596560 112596590 -138091264 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 698 248 62 117 chr2 112596590 112596763 -138091091 + REP3 LTR ERV 334 515 -47 477 169 45 102 chr2 112596824 112597001 -138090853 - L2 LINE L2 -457 2857 2691 1653 167 38 7 chr2 112597765 112598053 -138089801 + L1MC3 LINE L1 7127 7423 -362 838 183 14 0 chr2 112598058 112598200 -138089654 + FRAM SINE Alu 11 154 -22 840 123 29 71 chr2 112598200 112598370 -138089484 + L1MC3 LINE L1 7590 7752 -33 7461 23 7 1 chr2 112598372 112599227 -138088627 - L1PA3 LINE L1 -8 6147 5288 2306 80 0 0 chr2 112599242 112599529 -138088325 + AluSg SINE Alu 1 287 -23 354 23 0 0 chr2 112599529 112599572 -138088282 + (CA)n Simple_repeat Simple_repeat 2 44 0 1765 118 37 40 chr2 112599652 112599949 -138087905 - AluJo SINE Alu -8 304 9 348 347 47 10 chr2 112600486 112600679 -138087175 - MIR SINE MIR -12 250 51 2291 78 10 7 chr2 112600685 112600981 -138086873 - AluSq SINE Alu -16 297 1 423 136 284 0 chr2 112601084 112601172 -138086682 - MER46A DNA MER2_type 0 236 124 5403 166 46 12 chr2 112601173 112602746 -138085108 - L1PB3 LINE L1 -18 6136 4523 450 214 31 10 chr2 112603133 112603231 -138084623 - L1ME1 LINE L1 -50 6116 6017 * 1910 224 37 4 chr2 112603227 112603687 -138084167 - L1MD1 LINE L1 -371 5871 5397 1496 218 98 24 chr2 112603694 112604226 -138083628 - L1MD1 LINE L1 -880 5266 4696 2193 118 3 3 chr2 112604241 112604545 -138083309 - AluSx SINE Alu -8 304 1 23 0 0 0 chr2 112604620 112604643 -138083211 + AT_rich Low_complexity Low_complexity 1 23 0 3892 165 29 51 chr2 112605052 112605115 -138082739 - L1MB4 LINE L1 0 6180 6117 2203 88 11 0 chr2 112605115 112605400 -138082454 - AluSx SINE Alu -24 288 1 3892 165 29 51 chr2 112605400 112606331 -138081523 - L1MB4 LINE L1 -63 6117 5200 36 23 0 0 chr2 112606440 112606483 -138081371 + AT_rich Low_complexity Low_complexity 1 43 0 1535 146 8 24 chr2 112606550 112606804 -138081050 - AluJb SINE Alu -3 309 60 2184 112 3 3 chr2 112607333 112607629 -138080225 - AluSx SINE Alu -16 296 1 579 197 104 83 chr2 112607653 112607725 -138080129 + MER58C DNA MER1_type 7 76 -2344 2292 104 7 0 chr2 112607725 112608024 -138079830 - AluSq SINE Alu -8 305 5 579 197 104 83 chr2 112608024 112608144 -138079710 + MER58C DNA MER1_type 76 203 -12 2195 108 10 3 chr2 112608289 112608594 -138079260 - AluSx SINE Alu -5 307 1 2267 81 7 0 chr2 112608818 112609113 -138078741 - AluY SINE Alu -14 297 1 278 251 187 5 chr2 112609267 112609470 -138078384 + L1ME4a LINE L1 5805 6044 -77 2102 116 14 7 chr2 112610275 112610567 -138077287 + AluSx SINE Alu 1 294 -18 777 229 30 0 chr2 112610669 112610870 -138076984 + L1ME1 LINE L1 5937 6143 -23 1856 163 0 36 chr2 112610903 112611210 -138076644 + AluJo SINE Alu 1 296 -16 926 195 138 14 chr2 112611563 112611773 -138076081 - MER8 DNA MER2_type -3 236 1 636 250 110 83 chr2 112613410 112613774 -138074080 - L1ME3 LINE L1 -278 5884 5494 2527 50 0 25 chr2 112613774 112614093 -138073761 + AluY SINE Alu 1 311 0 636 250 110 83 chr2 112614093 112614323 -138073531 - L1ME3 LINE L1 -668 5494 5272 747 75 0 9 chr2 112615330 112615436 -138072418 - AluSq/x SINE Alu -208 105 1 599 245 175 20 chr2 112616640 112616880 -138070974 + MIR SINE MIR 5 262 0 667 191 32 0 chr2 112616890 112617047 -138070807 + MER104 DNA Tc2 7 168 -12 22 80 0 0 chr2 112618539 112618589 -138069265 + AT_rich Low_complexity Low_complexity 1 50 0 35 71 0 0 chr2 112618740 112618810 -138069044 + AT_rich Low_complexity Low_complexity 1 70 0 304 236 166 9 chr2 112618896 112619105 -138068749 - L1MC/D LINE L1 -299 5822 5567 252 167 0 0 chr2 112619410 112619458 -138068396 + CT-rich Low_complexity Low_complexity 3 50 0 678 35 12 0 chr2 112619515 112619600 -138068254 + AluY SINE Alu 214 299 -12 2092 108 14 3 chr2 112619616 112619902 -138067952 + AluSx SINE Alu 7 295 -17 3200 121 22 10 chr2 112620326 112620829 -138067025 + MER9 LTR ERVK 3 511 0 2169 130 3 0 chr2 112620843 112621142 -138066712 - AluJb SINE Alu -12 300 1 2138 116 3 13 chr2 112621744 112622046 -138065808 - AluSx SINE Alu -13 299 1 2079 126 0 13 chr2 112622056 112622357 -138065497 - AluSc SINE Alu -12 297 1 1876 86 4 8 chr2 112623302 112623545 -138064309 - AluSx SINE Alu -70 242 1 1770 174 33 0 chr2 112623545 112623844 -138064010 - AluJo SINE Alu -3 309 1 225 0 0 0 chr2 112623853 112623878 -138063976 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 2051 113 0 21 chr2 112623878 112624162 -138063692 - AluSg SINE Alu -32 278 1 291 183 57 27 chr2 112624162 112624236 -138063618 - L1MC/D LINE L1 -412 6152 6085 259 306 41 0 chr2 112624247 112624345 -138063509 - L1ME2 LINE L1 -11 6153 6052 291 317 0 29 chr2 112624767 112624871 -138062983 + MIR SINE MIR 73 173 -89 241 217 0 0 chr2 112625000 112625046 -138062808 - MER21B LTR ERV1 -805 58 13 3087 210 96 128 chr2 112625046 112625390 -138062464 - L1MC/D LINE L1 -1550 4990 4637 2211 121 0 16 chr2 112625390 112625704 -138062150 - AluSx SINE Alu -3 309 1 3087 210 96 128 chr2 112625704 112625949 -138061905 - L1MC/D LINE L1 -1903 4637 4386 1331 116 10 5 chr2 112625949 112626126 -138061728 - AluSg/x SINE Alu 0 310 130 2168 120 0 3 chr2 112626126 112626434 -138061420 - AluSx SINE Alu -5 307 1 1331 116 10 5 chr2 112626434 112626454 -138061400 - AluSg/x SINE Alu -180 130 112 3087 210 96 128 chr2 112626454 112627493 -138060361 - L1MC/D LINE L1 -2154 4386 3232 1976 120 7 7 chr2 112627493 112627769 -138060085 + AluSq SINE Alu 25 300 -13 3087 210 96 128 chr2 112627769 112627963 -138059891 - L1MC/D LINE L1 -3308 3232 3033 927 159 0 66 chr2 112627965 112628147 -138059707 - AluSg/x SINE Alu -6 304 135 313 202 128 11 chr2 112628174 112628268 -138059586 - L1MC/D LINE L1 -4983 1557 1453 23 33 0 0 chr2 112629514 112629544 -138058310 + AT_rich Low_complexity Low_complexity 1 30 0 180 111 0 0 chr2 112629836 112629863 -138057991 + (GA)n Simple_repeat Simple_repeat 2 28 0 1085 152 38 0 chr2 112629905 112630089 -138057765 - AluSg/x SINE Alu 0 310 120 430 301 18 72 chr2 112630863 112631029 -138056825 + L2 LINE L2 2602 2758 -556 180 0 0 0 chr2 112631032 112631052 -138056802 + (T)n Simple_repeat Simple_repeat 1 20 0 1210 228 114 12 chr2 112631055 112631447 -138056407 - LTR28 LTR ERV1 -197 439 1 1798 100 30 36 chr2 112631447 112631748 -138056106 - LTR28-int LTR ERV1 0 7091 6793 7572 195 9 23 chr2 112631905 112633411 -138054443 - MER52-int LTR ERV1 -2858 4233 2748 2556 308 41 49 chr2 112633524 112634804 -138053050 - MER52-int LTR ERV1 -4331 2760 1492 1047 204 55 5 chr2 112635122 112635342 -138052512 - MER52-int LTR ERV1 -6663 428 198 2262 130 0 0 chr2 112635414 112635722 -138052132 - AluSx SINE Alu -4 308 1 3088 156 24 62 chr2 112635844 112636541 -138051313 - L1MB7 LINE L1 -25 6159 5489 421 215 54 0 chr2 112636552 112636682 -138051172 - L1MB7 LINE L1 -1188 4958 4822 23 54 0 0 chr2 112636933 112636970 -138050884 + AT_rich Low_complexity Low_complexity 1 37 0 365 346 0 10 chr2 112636972 112637076 -138050778 + L2 LINE L2 3138 3240 -32 2008 106 35 3 chr2 112637717 112638001 -138049853 + AluSg SINE Alu 1 293 -17 410 239 63 0 chr2 112638004 112638146 -138049708 + L1ME2 LINE L1 6014 6164 0 2155 115 0 3 chr2 112638179 112638474 -138049380 + AluSq SINE Alu 1 294 -19 272 250 56 56 chr2 112639009 112639117 -138048737 + MIR SINE MIR 119 226 -36 687 249 129 42 chr2 112639324 112639734 -138048120 + MLT1J1 LTR MaLR 1 446 0 225 300 118 27 chr2 112640349 112640459 -138047395 + L2 LINE L2 3172 3291 -22 1954 168 0 0 chr2 112641138 112641441 -138046413 + AluSx SINE Alu 1 303 -9 1058 274 104 30 chr2 112641555 112642171 -138045683 - L2 LINE L2 -3 3310 2650 2487 77 0 0 chr2 112642739 112643039 -138044815 + AluY SINE Alu 1 300 -11 916 113 8 0 chr2 112644199 112644332 -138043522 - AluSg/x SINE Alu -10 300 167 1329 99 0 6 chr2 112644433 112644605 -138043249 + AluSp SINE Alu 122 292 -21 2828 183 30 2 chr2 112644605 112645200 -138042654 - L1MB7 LINE L1 -1764 4382 3771 757 161 54 0 chr2 112645202 112645332 -138042522 - MER46A DNA MER2_type -99 137 1 33 0 0 0 chr2 112646744 112646777 -138041077 + AT_rich Low_complexity Low_complexity 1 33 0 2720 164 24 29 chr2 112647083 112647673 -138040181 - L1MB4 LINE L1 0 6180 5594 758 216 7 7 chr2 112647680 112647828 -138040026 - FRAM SINE Alu -30 146 1 1559 145 77 7 chr2 112647831 112648141 -138039713 - L1MB4 LINE L1 -576 5604 5273 200 309 157 54 chr2 112648327 112648716 -138039138 + L2 LINE L2 2549 2977 -337 180 327 218 0 chr2 112648843 112648953 -138038901 + L2 LINE L2 3171 3304 -9 851 143 8 8 chr2 112648953 112649086 -138038768 + FLAM_C SINE Alu 1 133 -10 519 218 113 90 chr2 112649752 112650229 -138037625 - L1MC4 LINE L1 0 8042 7555 294 153 118 12 chr2 112650251 112650336 -138037518 - L1MC5 LINE L1 -36 7925 7832 2237 97 0 26 chr2 112650340 112650651 -138037203 + AluY SINE Alu 1 303 -8 335 370 19 0 chr2 112650776 112650992 -138036862 - L1MC4a LINE L1 -412 7396 7177 239 280 60 20 chr2 112651145 112651245 -138036609 - L1MC5 LINE L1 -897 7064 6961 29 0 0 0 chr2 112651446 112651475 -138036379 + AT_rich Low_complexity Low_complexity 1 29 0 2333 98 0 3 chr2 112652414 112652711 -138035143 + AluSp SINE Alu 2 297 -16 2199 93 6 13 chr2 112652916 112653228 -138034626 + AluSp SINE Alu 1 310 -3 3467 191 166 63 chr2 112653343 112654459 -138033395 - L1MDa LINE L1 -5173 1367 368 2429 75 0 0 chr2 112654459 112654753 -138033101 + AluSc SINE Alu 1 294 -15 1102 139 57 30 chr2 112654757 112654987 -138032867 - L1MB3 LINE L1 -16 6167 5932 3467 191 166 63 chr2 112654987 112655074 -138032780 - L1MDa LINE L1 -6174 366 34 180 273 76 30 chr2 112655604 112655670 -138032184 - MIR SINE MIR 0 262 194 298 323 15 15 chr2 112655862 112655992 -138031862 - MIR SINE MIR -57 151 22 470 280 25 25 chr2 112656177 112656334 -138031520 + MER5B DNA MER1_type 13 169 -9 255 140 0 0 chr2 112656621 112656671 -138031183 + (T)n Simple_repeat Simple_repeat 1 50 0 326 277 107 0 chr2 112656822 112656934 -138030920 + LTR33 LTR ERVL 16 139 -382 279 213 0 0 chr2 112656983 112657044 -138030810 + MER53 DNA DNA 129 189 0 207 0 0 0 chr2 112657500 112657523 -138030331 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2171 92 0 7 chr2 112657526 112657810 -138030044 - AluSx SINE Alu -30 282 1 1855 124 0 11 chr2 112658107 112658372 -138029482 + AluSx SINE Alu 36 297 -15 724 133 102 0 chr2 112658606 112658734 -138029120 - FLAM_C SINE Alu -1 142 2 304 276 16 24 chr2 112659303 112659426 -138028428 - MER117 DNA MER1_type 0 197 76 279 214 34 79 chr2 112660856 112660945 -138026909 + MER91C DNA MER1_type 25 109 -31 274 261 210 0 chr2 112661059 112661178 -138026676 - MIR SINE MIR 0 262 119 201 324 15 0 chr2 112661719 112661787 -138026067 - L2 LINE L2 0 3272 3204 1970 114 0 47 chr2 112662229 112662527 -138025327 - AluSx SINE Alu -28 284 1 1515 110 57 64 chr2 112662853 112663117 -138024737 + 7SLRNA srpRNA srpRNA 59 320 0 2081 89 0 0 chr2 112664076 112664334 -138023520 + AluSc SINE Alu 45 302 -7 2517 62 0 0 chr2 112664816 112665107 -138022747 - AluY SINE Alu -20 291 1 3072 115 38 2 chr2 112665241 112665710 -138022144 - LTR19A LTR ERV1 0 486 1 7041 65 15 0 chr2 112666349 112667491 -138020363 - L1PA7 LINE L1 -2 6152 5007 432 0 0 0 chr2 112668265 112668313 -138019541 + (TG)n Simple_repeat Simple_repeat 2 49 0 241 219 0 0 chr2 112668320 112668384 -138019470 - L1ME4a LINE L1 -11 6110 6047 23 0 0 0 chr2 112668422 112668445 -138019409 + AT_rich Low_complexity Low_complexity 1 23 0 2262 109 0 0 chr2 112668547 112668841 -138019013 - AluY SINE Alu -16 295 2 35 54 0 0 chr2 112669020 112669076 -138018778 + AT_rich Low_complexity Low_complexity 1 56 0 1560 169 40 25 chr2 112669789 112670092 -138017762 + AluJo SINE Alu 1 307 0 562 131 77 77 chr2 112670529 112670659 -138017195 - L1MB3 LINE L1 0 6183 6054 1672 151 45 0 chr2 112670691 112670867 -138016987 - AluJb SINE Alu 0 312 119 184 30 61 0 chr2 112670867 112670900 -138016954 + (TTTG)n Simple_repeat Simple_repeat 4 38 0 1672 151 45 0 chr2 112670900 112670988 -138016866 - AluJb SINE Alu -193 119 36 391 154 0 0 chr2 112670988 112671053 -138016801 - L1MB3 LINE L1 -204 5967 5903 2501 159 26 15 chr2 112671158 112671366 -138016488 - L1MA9 LINE L1 -314 5998 5794 234 0 0 0 chr2 112671366 112671392 -138016462 + (TA)n Simple_repeat Simple_repeat 2 27 0 2501 159 26 15 chr2 112671392 112671648 -138016206 - L1MA9 LINE L1 -518 5794 5529 181 394 19 19 chr2 112671800 112671904 -138015950 - L3 LINE CR1 -1437 140 37 395 133 0 17 chr2 112672516 112672576 -138015278 - U6 snRNA snRNA -48 59 1 232 220 132 11 chr2 112672582 112672673 -138015181 - L1ME LINE L1 -460 5661 5560 2166 122 3 3 chr2 112673415 112673719 -138014135 - AluSx SINE Alu -8 304 1 223 169 169 0 chr2 112674329 112674388 -138013466 + L2 LINE L2 3203 3271 -1 21 36 0 0 chr2 112674478 112674506 -138013348 + AT_rich Low_complexity Low_complexity 1 28 0 29 0 0 0 chr2 112674750 112674779 -138013075 + AT_rich Low_complexity Low_complexity 1 29 0 1488 198 102 57 chr2 112675141 112675612 -138012242 + L1MD2 LINE L1 5856 6347 -12 2027 41 8 0 chr2 112675728 112675970 -138011884 + L1PA5 LINE L1 5909 6152 -2 371 273 144 8 chr2 112676009 112676141 -138011713 + MIR SINE MIR 68 217 -45 845 207 62 10 chr2 112676502 112676710 -138011144 - AluJo SINE Alu -10 302 84 2190 76 69 0 chr2 112676773 112677063 -138010791 - AluY SINE Alu 0 311 2 409 292 75 0 chr2 112677067 112677187 -138010667 + L2 LINE L2 2652 2780 -534 743 266 53 80 chr2 112677201 112677577 -138010277 + L2 LINE L2 2947 3312 -1 242 289 21 82 chr2 112679070 112679264 -138008590 + Charlie2 DNA MER1_type 80 261 -2601 274 61 41 0 chr2 112679293 112679342 -138008512 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1373 156 59 76 chr2 112679351 112679639 -138008215 - AluJb SINE Alu -19 283 1 520 167 65 0 chr2 112679639 112679747 -138008107 - Charlie1 DNA MER1_type -24 2737 2623 * 846 236 17 79 chr2 112679744 112679985 -138007869 - Charlie1 DNA MER1_type -2535 226 1 2437 89 0 9 chr2 112680042 112680357 -138007497 + AluSx SINE Alu 1 312 0 392 194 352 5 chr2 112680377 112680593 -138007261 + Charlie2 DNA MER1_type 2246 2536 -326 384 262 40 13 chr2 112680646 112680795 -138007059 + Charlie2 DNA MER1_type 2706 2858 -4 328 225 34 22 chr2 112680978 112681067 -138006787 - MER20B DNA MER1_type -401 382 293 500 200 26 0 chr2 112681125 112681240 -138006614 - MER20B DNA MER1_type -665 118 1 2251 116 0 16 chr2 112681272 112681582 -138006272 + AluSx SINE Alu 1 305 -7 281 92 0 255 chr2 112681602 112681700 -138006154 - MLT2D LTR ERVL 0 464 392 1978 182 20 3 chr2 112682180 112682531 -138005323 - MLT2D LTR ERVL -57 357 1 2148 89 14 7 chr2 112684656 112684936 -138002918 + AluSx SINE Alu 1 282 -30 1003 308 134 43 chr2 112685717 112687029 -138000825 + L2 LINE L2 1852 3300 -13 384 241 0 0 chr2 112687249 112687336 -138000518 - L1ME3 LINE L1 -2 6160 6074 235 222 74 0 chr2 112687336 112687390 -138000464 - MER3 DNA MER1_type -137 72 15 2666 178 30 79 chr2 112687390 112687599 -138000255 - L1ME2 LINE L1 -146 6018 5800 2050 133 7 0 chr2 112687599 112687899 -137999955 - AluSx SINE Alu -10 302 1 2666 178 30 79 chr2 112687899 112688426 -137999428 - L1ME2 LINE L1 -364 5800 5318 2459 59 23 3 chr2 112688640 112688945 -137998909 - AluY SINE Alu 0 311 1 1886 139 31 10 chr2 112689716 112690004 -137997850 + AluSx SINE Alu 1 294 -18 3305 144 119 143 chr2 112690010 112690333 -137997521 - L1MC3 LINE L1 -20 7765 7436 7861 75 3 1 chr2 112690333 112691300 -137996554 - LTR5 LTR ERVK 0 969 1 3305 144 119 143 chr2 112691300 112691553 -137996301 - L1MC3 LINE L1 -349 7436 7178 351 247 43 0 chr2 112691553 112691646 -137996208 - MLT1F1 LTR MaLR -442 125 29 3305 144 119 143 chr2 112691646 112692052 -137995802 - L1MC3 LINE L1 -607 7178 6716 23 33 0 0 chr2 112692066 112692096 -137995758 + AT_rich Low_complexity Low_complexity 1 30 0 613 239 78 23 chr2 112692821 112693039 -137994815 + MIR SINE MIR 23 252 -10 296 265 15 68 chr2 112694450 112694582 -137993272 - MIR SINE MIR -72 190 66 482 279 105 18 chr2 112694653 112694872 -137992982 + MIR SINE MIR 17 254 -8 203 262 0 0 chr2 112695116 112695158 -137992696 + (CA)n Simple_repeat Simple_repeat 2 43 0 239 222 51 86 chr2 112695216 112695333 -137992521 + L2 LINE L2 3140 3252 -20 225 65 0 0 chr2 112695582 112695613 -137992241 + (TG)n Simple_repeat Simple_repeat 2 32 0 2192 97 16 42 chr2 112696126 112696437 -137991417 - AluSp SINE Alu -10 303 1 206 235 98 0 chr2 112696859 112696910 -137990944 - MIR SINE MIR -174 88 33 2642 49 0 0 chr2 112697294 112697599 -137990255 - AluY SINE Alu -6 305 1 305 120 0 0 chr2 112697765 112697815 -137990039 - AluSq SINE Alu -2 300 251 2037 156 10 0 chr2 112698713 112699021 -137988833 - AluJb SINE Alu -1 311 1 32 44 0 29 chr2 112699027 112699055 -137988799 + AT_rich Low_complexity Low_complexity 1 28 -38 2308 101 3 3 chr2 112699055 112699351 -137988503 - AluSp SINE Alu -17 296 1 32 44 0 29 chr2 112699351 112699390 -137988464 + AT_rich Low_complexity Low_complexity 28 66 0 472 235 206 18 chr2 112699526 112699854 -137988000 + L2 LINE L2 2664 3060 -253 285 98 0 0 chr2 112699933 112699974 -137987880 + (TTCC)n Simple_repeat Simple_repeat 4 44 0 1928 105 0 0 chr2 112699997 112700245 -137987609 - AluSq SINE Alu -65 248 1 26 0 0 0 chr2 112701472 112701498 -137986356 + AT_rich Low_complexity Low_complexity 1 26 0 2268 91 3 3 chr2 112701543 112701840 -137986014 - AluSg SINE Alu -13 297 1 2124 98 0 89 chr2 112702597 112702935 -137984919 - AluSx SINE Alu -4 308 1 217 367 36 7 chr2 112703964 112704103 -137983751 + MIR3 SINE MIR 35 177 -31 2267 93 7 3 chr2 112704299 112704589 -137983265 + AluSq SINE Alu 1 291 -22 392 309 82 35 chr2 112705770 112706026 -137981828 - MLT1J LTR MaLR -14 497 230 3203 123 12 19 chr2 112706073 112706364 -137981490 + L1MA5A LINE L1 5277 5564 -733 5088 88 18 5 chr2 112706364 112707015 -137980839 + PABL_A LTR ERV1 1 660 0 3203 123 12 19 chr2 112707015 112707236 -137980618 + L1MA5A LINE L1 5564 5785 -512 1154 199 0 0 chr2 112707236 112707432 -137980422 + AluJo SINE Alu 87 282 -30 2292 106 0 0 chr2 112707434 112707737 -137980117 - AluSq SINE Alu -10 303 1 180 0 0 0 chr2 112707759 112707779 -137980075 + (TG)n Simple_repeat Simple_repeat 2 21 0 2015 125 14 36 chr2 112707779 112708132 -137979722 + L1MA5A LINE L1 5775 6121 -176 318 106 0 0 chr2 112708642 112708689 -137979165 + (TCC)n Simple_repeat Simple_repeat 1 47 0 3496 240 53 9 chr2 112708689 112709800 -137978054 - L1MEc LINE L1 -2528 3687 2528 1351 147 0 0 chr2 112709834 112710059 -137977795 - AluSq SINE Alu 0 310 86 422 168 0 25 chr2 112710501 112710646 -137977208 + MER53 DNA DNA 1 189 0 180 0 0 0 chr2 112711805 112711825 -137976029 + (A)n Simple_repeat Simple_repeat 1 20 0 1652 134 57 50 chr2 112711924 112712207 -137975647 + AluSx SINE Alu 5 289 -23 22 35 0 0 chr2 112712211 112712240 -137975614 + AT_rich Low_complexity Low_complexity 1 29 0 219 176 0 39 chr2 112712282 112712302 -137975552 + GA-rich Low_complexity Low_complexity 4 23 -29 2279 116 3 0 chr2 112712302 112712613 -137975241 + AluSq SINE Alu 2 313 0 219 176 0 39 chr2 112712613 112712643 -137975211 + GA-rich Low_complexity Low_complexity 23 52 0 282 263 0 13 chr2 112712658 112712734 -137975120 - MER58B DNA MER1_type 0 341 267 2364 152 65 77 chr2 112713584 112714091 -137973763 - MER21A LTR ERV1 -55 876 376 1535 123 11 45 chr2 112714096 112714336 -137973518 - MER21A LTR ERV1 -667 264 32 441 0 0 0 chr2 112714336 112714385 -137973469 + (TG)n Simple_repeat Simple_repeat 2 50 0 1535 123 11 45 chr2 112714385 112714413 -137973441 - MER21A LTR ERV1 -899 32 5 4000 248 71 64 chr2 112714440 112715760 -137972094 - L1MEc LINE L1 -4125 2271 962 1338 140 54 128 chr2 112715760 112715951 -137971903 - AluJo SINE Alu -2 310 106 2243 114 16 0 chr2 112715951 112716257 -137971597 - AluSp SINE Alu -1 312 2 248 0 31 0 chr2 112716258 112716290 -137971564 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1338 140 54 128 chr2 112716290 112716431 -137971423 - AluJo SINE Alu -205 107 1 4000 248 71 64 chr2 112716431 112716902 -137970952 - L1MEc LINE L1 -5434 962 467 2098 264 131 56 chr2 112716954 112718225 -137969629 - HAL1 LINE L1 -767 1740 354 2613 49 0 0 chr2 112718225 112718531 -137969323 - AluY SINE Alu -4 307 2 2098 264 131 56 chr2 112718531 112718654 -137969200 - HAL1 LINE L1 -2153 354 242 652 178 0 0 chr2 112719099 112719200 -137968654 - AluSg/x SINE Alu -9 303 203 230 340 21 31 chr2 112719272 112719369 -137968485 - L1MC/D LINE L1 -2153 5655 5560 252 0 0 0 chr2 112719426 112719454 -137968400 + (CA)n Simple_repeat Simple_repeat 2 29 0 1762 172 17 7 chr2 112719742 112720044 -137967810 - AluJb SINE Alu -7 305 1 857 185 86 59 chr2 112720067 112720289 -137967565 - AluJo SINE Alu -1 311 84 201 175 0 0 chr2 112720887 112720927 -137966927 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 2257 181 108 29 chr2 112721617 112722099 -137965755 - MLT2B1 LTR ERVL 0 520 1 2490 91 71 3 chr2 112723203 112723542 -137964312 - THE1B LTR MaLR 0 364 3 433 281 58 0 chr2 112725373 112725512 -137962342 - MER103 DNA DNA 0 166 20 759 105 0 0 chr2 112725677 112725772 -137962082 - AluSg/x SINE Alu -12 298 204 432 297 117 22 chr2 112726263 112726351 -137961503 - MIR SINE MIR 0 262 184 2185 103 0 10 chr2 112726351 112726641 -137961213 + AluSx SINE Alu 1 287 -25 432 297 117 22 chr2 112726641 112726774 -137961080 - MIR SINE MIR -78 184 20 2110 122 17 0 chr2 112727779 112728067 -137959787 + AluSx SINE Alu 1 293 -19 1875 153 11 0 chr2 112728613 112728900 -137958954 + AluSx SINE Alu 6 295 -17 320 311 143 26 chr2 112729188 112729615 -137958239 - L2 LINE L2 -1139 2175 1699 1800 182 0 16 chr2 112729660 112729967 -137957887 - AluJb SINE Alu -10 302 1 2166 66 44 0 chr2 112730483 112730782 -137957072 - AluSp SINE Alu 0 311 1 2461 71 0 7 chr2 112731196 112731504 -137956350 - AluY SINE Alu -5 306 1 183 156 0 0 chr2 112731726 112731758 -137956096 + T-rich Low_complexity Low_complexity 1 32 0 2877 224 50 31 chr2 112731767 112732607 -137955247 - L1MB7 LINE L1 -13 6171 5316 1612 230 122 4 chr2 112732602 112733085 -137954769 - L1MD2 LINE L1 -9 6350 5811 * 2472 56 0 0 chr2 112733741 112734029 -137953825 - AluY SINE Alu -23 288 1 354 210 89 51 chr2 112734325 112734482 -137953372 - L1ME3A LINE L1 -219 5951 5789 11408 114 38 32 chr2 112734487 112735968 -137951886 + Tigger1 DNA MER2_type 5 1501 -917 2453 71 0 0 chr2 112735968 112736264 -137951590 + AluY SINE Alu 1 296 -15 11408 114 38 32 chr2 112736264 112736598 -137951256 + Tigger1 DNA MER2_type 1501 1831 -587 592 252 117 18 chr2 112736598 112736919 -137950935 + L1ME LINE L1 2179 2519 -3696 256 224 0 0 chr2 112736902 112736960 -137950894 - L1M4 LINE L1 -3485 2661 2604 * 844 170 16 44 chr2 112736973 112737155 -137950699 - AluJb SINE Alu -7 305 129 778 233 55 0 chr2 112737172 112737335 -137950519 - MER58C DNA MER1_type -39 176 5 419 239 9 0 chr2 112737339 112737448 -137950406 + L1ME LINE L1 3967 4076 -2139 922 292 29 36 chr2 112737458 112737872 -137949982 - L1MDa LINE L1 -6103 437 27 2269 73 3 20 chr2 112738157 112738458 -137949396 - AluY SINE Alu -15 296 1 1545 179 4 4 chr2 112738619 112738876 -137948978 + AluJb SINE Alu 40 296 -16 472 262 169 6 chr2 112739850 112740033 -137947821 - MIR SINE MIR 0 262 50 22 0 0 0 chr2 112740217 112740239 -137947615 + AT_rich Low_complexity Low_complexity 1 22 0 2621 33 0 7 chr2 112740637 112740940 -137946914 - AluY SINE Alu -10 301 1 22 70 0 0 chr2 112740997 112741040 -137946814 + AT_rich Low_complexity Low_complexity 1 43 0 1554 194 3 11 chr2 112741484 112741768 -137946086 + AluJo SINE Alu 1 282 -30 2327 110 0 0 chr2 112742047 112742346 -137945508 - AluSq SINE Alu -14 299 1 1000 187 150 0 chr2 112792426 112792794 -137895060 + L1ME LINE L1 5158 5567 -668 232 300 60 45 chr2 112792793 112792993 -137894861 + L1M4 LINE L1 4750 4952 -1194 * 363 214 165 91 chr2 112793117 112793402 -137894452 + MLT1H LTR MaLR 77 382 -167 307 198 58 47 chr2 112793794 112793880 -137893974 + L1MDa LINE L1 2400 2486 -4054 1967 84 0 0 chr2 112793881 112794120 -137893734 + AluSq SINE Alu 1 239 -74 320 178 110 0 chr2 112794152 112794225 -137893629 + Alu SINE Alu 219 299 -2 561 233 25 6 chr2 112794226 112794389 -137893465 + L1MDa LINE L1 2514 2679 -4042 232 146 0 0 chr2 112794391 112794432 -137893422 + Alu SINE Alu 260 300 -2 189 0 0 0 chr2 112794432 112794453 -137893401 + (GGAA)n Simple_repeat Simple_repeat 3 23 0 468 150 0 0 chr2 112794469 112794549 -137893305 + (GA)n Simple_repeat Simple_repeat 1 80 0 1150 221 33 28 chr2 112794553 112794915 -137892939 + L1MDa LINE L1 3164 3527 -3013 1337 260 34 77 chr2 112795110 112795667 -137892187 + MER74A LTR ERVL 14 546 -12 619 278 47 9 chr2 112795682 112796024 -137891830 + L1MDa LINE L1 3523 3877 -2663 552 247 118 24 chr2 112796086 112796256 -137891598 + MIR SINE MIR 71 256 -6 466 302 114 5 chr2 112796308 112796510 -137891344 - MIR SINE MIR -14 248 25 477 276 65 29 chr2 112797017 112797187 -137890667 + MIR SINE MIR 87 262 0 2333 88 0 3 chr2 112797280 112797588 -137890266 + AluSc SINE Alu 1 307 -2 599 241 42 0 chr2 112798765 112798921 -137888933 - MIR SINE MIR -52 210 50 2050 128 10 3 chr2 112799056 112799352 -137888502 - AluSx SINE Alu -14 298 1 4608 210 80 28 chr2 112799353 112800036 -137887818 - L1M4 LINE L1 -1226 4920 4274 2199 92 0 3 chr2 112800036 112800330 -137887524 - AluSq SINE Alu -20 293 1 4608 210 80 28 chr2 112800330 112800967 -137886887 - L1M4 LINE L1 -1872 4274 3508 2441 70 0 7 chr2 112800967 112801266 -137886588 - AluY SINE Alu -14 297 1 4608 210 80 28 chr2 112801266 112801461 -137886393 - L1M4 LINE L1 -2638 3508 3325 2297 113 0 0 chr2 112801476 112801769 -137886085 - AluSx SINE Alu -15 297 5 2032 122 4 0 chr2 112801769 112802038 -137885816 - AluSq SINE Alu -41 272 1 1152 152 0 0 chr2 112802087 112802251 -137885603 - AluJo SINE Alu -22 290 127 793 176 120 0 chr2 112802403 112802636 -137885218 + L1M4 LINE L1 4256 4516 -1630 * 1296 196 111 32 chr2 112802629 112803033 -137884821 - L1ME2 LINE L1 -50 6114 5679 309 318 143 0 chr2 112803206 112803360 -137884494 - L1M4 LINE L1 -2166 3980 3805 1926 122 14 17 chr2 112803426 112803713 -137884141 - AluSx SINE Alu -26 286 1 1333 192 27 47 chr2 112803839 112804341 -137883513 - L1M4 LINE L1 -430 6016 1424 520 162 20 20 chr2 112804390 112804489 -137883365 - Tigger6 DNA MER2_type -983 100 2 950 267 98 35 chr2 112804494 112805019 -137882835 - L1M4c LINE L1 -4490 2073 1367 240 179 0 95 chr2 112805029 112805056 -137882798 - L1M4 LINE L1 -5947 469 441 2274 98 3 16 chr2 112805056 112805362 -137882492 - AluSx SINE Alu -10 302 1 240 179 0 95 chr2 112805362 112805418 -137882436 - L1M4 LINE L1 -5975 441 394 449 278 12 43 chr2 112807745 112807907 -137879947 - L1ME3A LINE L1 -83 6087 5931 614 256 117 22 chr2 112807921 112808144 -137879710 - L1ME3A LINE L1 -341 5829 5586 876 176 0 0 chr2 112811096 112811232 -137876622 - AluJo SINE Alu -176 136 1 2115 231 74 63 chr2 112811362 112811813 -137876041 + L1ME1 LINE L1 5317 5761 -573 2468 64 0 10 chr2 112811813 112812124 -137875730 + AluSc SINE Alu 1 308 -1 2115 231 74 63 chr2 112812124 112812200 -137875654 + L1ME1 LINE L1 5761 5835 -499 3538 115 18 6 chr2 112812200 112812703 -137875151 - MER75 DNA T2_type -3 511 3 2115 231 74 63 chr2 112812703 112812755 -137875099 + L1ME1 LINE L1 5835 5885 -449 951 145 0 0 chr2 112812755 112812886 -137874968 + FLAM_C SINE Alu 1 131 -2 2115 231 74 63 chr2 112812886 112813123 -137874731 + L1ME1 LINE L1 5885 6310 -24 425 274 0 7 chr2 112813648 112813794 -137874060 + (CA)n Simple_repeat Simple_repeat 2 146 0 207 203 0 0 chr2 112813818 112813882 -137873972 + (CA)n Simple_repeat Simple_repeat 2 65 0 285 271 80 58 chr2 112814210 112814435 -137873419 - L2 LINE L2 -93 3220 2991 470 192 104 52 chr2 112815274 112815454 -137872400 + MIR SINE MIR 3 191 -61 217 252 56 0 chr2 112817622 112817765 -137870089 + GA-rich Low_complexity Low_complexity 2 152 0 33 94 0 0 chr2 112817941 112818037 -137869817 + GC_rich Low_complexity Low_complexity 1 96 0 2008 163 80 3 chr2 112818972 112819310 -137868544 - MLT1A1 LTR MaLR 0 365 2 2087 120 3 3 chr2 112819437 112819728 -137868126 - AluSx SINE Alu -18 294 4 228 293 0 0 chr2 112820174 112820232 -137867622 - MIR SINE MIR -116 146 89 186 111 16 79 chr2 112820393 112820456 -137867398 + (TTTTTG)n Simple_repeat Simple_repeat 2 60 0 2158 110 7 10 chr2 112820778 112821077 -137866777 - AluSg SINE Alu -12 298 1 2146 136 3 0 chr2 112821325 112821626 -137866228 + AluSx SINE Alu 1 302 -10 2192 108 10 0 chr2 112821626 112821920 -137865934 + AluY SINE Alu 1 298 -13 1961 141 0 32 chr2 112822108 112822421 -137865433 + AluJb SINE Alu 2 304 -8 1847 296 53 41 chr2 112822481 112823229 -137864625 - L1MEc LINE L1 -4445 1951 1182 2153 53 103 4 chr2 112823229 112823510 -137864344 - AluY SINE Alu -2 309 1 1847 296 53 41 chr2 112823510 112823957 -137863897 - L1MEc LINE L1 -5214 1182 742 5847 190 25 15 chr2 112823968 112825698 -137862156 - L1MB7 LINE L1 -19 6663 4910 1559 185 24 27 chr2 112825698 112825873 -137861981 - AluJo SINE Alu -6 306 131 1862 132 15 0 chr2 112825873 112826138 -137861716 - AluSx SINE Alu -14 298 30 1559 185 24 27 chr2 112826138 112826260 -137861594 - AluJo SINE Alu -181 131 10 5847 190 25 15 chr2 112826260 112826614 -137861240 - L1MB7 LINE L1 -1772 4910 4561 2095 180 0 35 chr2 112826615 112826908 -137860946 - MLT1A1 LTR MaLR 0 365 86 530 29 29 0 chr2 112826908 112826976 -137860878 - L1PA7 LINE L1 0 6154 6085 2095 180 0 35 chr2 112826976 112827059 -137860795 - MLT1A1 LTR MaLR -279 86 2 2044 207 40 26 chr2 112827060 112827558 -137860296 - L1MB7 LINE L1 -2080 4564 4060 403 231 6 25 chr2 112827560 112827720 -137860134 + CT-rich Low_complexity Low_complexity 1 157 0 2034 126 3 20 chr2 112827727 112828020 -137859834 - AluJb SINE Alu -22 290 3 922 222 30 17 chr2 112828020 112828254 -137859600 - L1MB7 LINE L1 -2571 4073 3837 5010 218 102 19 chr2 112828264 112828437 -137859417 - L1MB7 LINE L1 -4038 2608 2451 2269 86 0 0 chr2 112828437 112828744 -137859110 - AluSg SINE Alu 0 307 1 5010 218 102 19 chr2 112828744 112829081 -137858773 - L1MB7 LINE L1 -4195 2451 2143 2134 132 6 0 chr2 112829081 112829392 -137858462 - AluSq SINE Alu 0 313 1 5010 218 102 19 chr2 112829392 112830898 -137856956 - L1MB7 LINE L1 -4503 2143 389 221 257 257 0 chr2 112831188 112831258 -137856596 + MIR3 SINE MIR 107 194 -14 291 274 133 9 chr2 112831922 112832035 -137855819 + MIR SINE MIR 58 184 -78 360 0 0 0 chr2 112832303 112832343 -137855511 + (TTA)n Simple_repeat Simple_repeat 2 41 0 2198 83 0 4 chr2 112832345 112832621 -137855233 - AluY SINE Alu -36 275 1 414 265 59 41 chr2 112832664 112832834 -137855020 + MLT1J2 LTR MaLR 231 403 -47 2610 42 0 16 chr2 112832926 112833233 -137854621 - AluY SINE Alu -9 302 1 208 173 19 0 chr2 112833267 112833319 -137854535 + (TTAA)n Simple_repeat Simple_repeat 2 54 0 428 266 176 33 chr2 112833439 112833683 -137854171 - L1ME4a LINE L1 -257 5864 5586 230 164 18 18 chr2 112833813 112833868 -137853986 - L1ME4a LINE L1 -693 5428 5374 2033 261 142 57 chr2 112837081 112837311 -137850543 - L2 LINE L2 -2 3311 3102 2380 48 35 0 chr2 112837311 112837600 -137850254 - AluY SINE Alu -12 299 1 2033 261 142 57 chr2 112837600 112838628 -137849226 - L2 LINE L2 -211 3102 1929 589 233 121 39 chr2 112838677 112838909 -137848945 + MIR SINE MIR 6 256 -6 372 339 132 28 chr2 112839629 112839918 -137847936 + L2 LINE L2 2953 3271 -1 26 0 0 0 chr2 112840455 112840481 -137847373 + AT_rich Low_complexity Low_complexity 1 26 0 2803 129 34 45 chr2 112840653 112840718 -137847136 - MLT1C LTR MaLR -1 466 402 2255 101 3 10 chr2 112840718 112841025 -137846829 + AluSg SINE Alu 1 305 -5 2803 129 34 45 chr2 112841025 112841254 -137846600 - MLT1C LTR MaLR -65 402 176 1888 115 34 37 chr2 112841254 112841549 -137846305 - AluJb SINE Alu -18 294 1 2803 129 34 45 chr2 112841549 112841724 -137846130 - MLT1C LTR MaLR -291 176 1 1515 96 5 0 chr2 112841767 112841964 -137845890 + AluSp SINE Alu 96 293 -20 273 183 0 0 chr2 112842054 112842114 -137845740 + CT-rich Low_complexity Low_complexity 2 61 0 1906 156 30 0 chr2 112842117 112842418 -137845436 - AluSx SINE Alu -2 310 1 2020 125 0 14 chr2 112842874 112843169 -137844685 - AluSx SINE Alu -21 291 1 15190 112 43 54 chr2 112843222 112844803 -137843051 - Tigger1 DNA MER2_type -3 2415 868 2153 118 0 0 chr2 112844803 112845090 -137842764 - AluSx SINE Alu -25 287 1 15190 112 43 54 chr2 112845090 112845948 -137841906 - Tigger1 DNA MER2_type -1550 868 2 651 206 193 50 chr2 112846093 112846477 -137841377 - HAL1 LINE L1 -824 1683 1245 3424 152 86 13 chr2 112846671 112847343 -137840511 - Cheshire DNA MER1_type 0 2420 1700 3422 191 96 63 chr2 112847334 112848293 -137839561 - Cheshire DNA MER1_type -1427 993 3 * 1843 170 50 70 chr2 112848491 112848973 -137838881 - Charlie4a DNA MER1_type -6 502 31 532 62 25 0 chr2 112849428 112849509 -137838345 + (CA)n Simple_repeat Simple_repeat 1 83 0 418 207 7 9 chr2 112850111 112850261 -137837593 - MER58B DNA MER1_type 0 341 41 2263 115 3 0 chr2 112850578 112850882 -137836972 + AluSx SINE Alu 2 306 -6 547 168 48 16 chr2 112851752 112851877 -137835977 - L1MC5 LINE L1 -30 7931 7803 2016 108 38 3 chr2 112852595 112852882 -137834972 + AluSx SINE Alu 1 297 -15 374 167 0 0 chr2 112852938 112852992 -137834862 + FRAM SINE Alu 59 112 -54 1483 155 29 73 chr2 112853381 112853697 -137834157 - AluJo SINE Alu -10 302 1 2002 81 37 54 chr2 112854201 112854496 -137833358 - AluSq SINE Alu -23 290 1 180 0 0 0 chr2 112854505 112854525 -137833329 + (T)n Simple_repeat Simple_repeat 1 20 0 367 308 100 0 chr2 112854943 112855063 -137832791 - MIR SINE MIR -59 149 18 511 231 53 81 chr2 112855507 112855643 -137832211 - Tigger8 DNA MER2_type -254 412 285 2256 113 3 0 chr2 112855643 112855943 -137831911 - AluSx SINE Alu -11 301 1 511 231 53 81 chr2 112855943 112856053 -137831801 - Tigger8 DNA MER2_type -381 285 173 384 82 33 0 chr2 112856499 112856560 -137831294 + AluS SINE Alu 12 74 -229 2182 99 3 7 chr2 112856564 112856867 -137830987 - AluY SINE Alu 0 311 10 1839 119 51 20 chr2 112858128 112858421 -137829433 - AluSx SINE Alu -10 302 1 717 276 128 9 chr2 112859821 112860415 -137827439 - L1ME3A LINE L1 -208 5962 5297 1995 52 4 8 chr2 112860559 112860809 -137827045 - L1PA5 LINE L1 0 6154 5906 1225 184 31 31 chr2 112860873 112861161 -137826693 - L1MB3 LINE L1 -2 6181 5894 281 80 100 0 chr2 112861163 112861213 -137826641 - L1MB3 LINE L1 -251 5932 5878 958 151 18 6 chr2 112861217 112861383 -137826471 - L1MB3 LINE L1 -207 5976 5809 4855 211 61 24 chr2 112861718 112862276 -137825578 + L1PA13 LINE L1 1532 2068 -4729 2620 97 77 12 chr2 112862276 112862678 -137825176 - MSTA LTR MaLR 0 428 1 4855 211 61 24 chr2 112862678 112862994 -137824860 + L1PA13 LINE L1 2068 2371 -4426 2257 114 3 0 chr2 112862994 112863292 -137824562 - AluSp SINE Alu -14 299 1 4855 211 61 24 chr2 112863292 112864309 -137823545 + L1PA13 LINE L1 2371 3553 -3244 2642 216 44 6 chr2 112864317 112864956 -137822898 - L1 LINE L1 -1073 5073 4411 840 136 0 119 chr2 112864956 112865132 -137822722 - Tigger2 DNA MER2_type 0 2718 2564 628 179 38 0 chr2 112865155 112865261 -137822593 - Tigger2 DNA MER2_type -2608 110 1 412 188 50 0 chr2 112865261 112865362 -137822492 - L1 LINE L1 -1734 4412 4307 2446 180 61 105 chr2 112865559 112865779 -137822075 + Charlie1 DNA MER1_type 1567 1795 -966 450 250 108 0 chr2 112865779 112865899 -137821955 + FLAM_A SINE Alu 1 133 0 2446 180 61 105 chr2 112865899 112866400 -137821454 + Charlie1 DNA MER1_type 1795 2256 -505 1972 123 33 23 chr2 112866443 112866745 -137821109 - AluSx SINE Alu -7 305 1 240 230 50 80 chr2 112866778 112866978 -137820876 - L1MDa LINE L1 -3904 2636 2443 629 261 88 0 chr2 112867502 112867740 -137820114 - L2 LINE L2 -1727 1587 1329 350 147 77 105 chr2 112867792 112867935 -137819919 - L1ME4a LINE L1 -273 5848 5710 21 82 0 0 chr2 112868762 112868811 -137819043 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr2 112869336 112869360 -137818494 + AT_rich Low_complexity Low_complexity 1 24 0 334 45 23 0 chr2 112869587 112869631 -137818223 + AluY SINE Alu 2 46 -257 1914 158 16 13 chr2 112869733 112870037 -137817817 + AluJo SINE Alu 1 305 -7 193 271 106 12 chr2 112870175 112870260 -137817594 - MIR SINE MIR -18 244 152 701 212 10 78 chr2 112870305 112870498 -137817356 + MLT1L LTR MaLR 420 599 -16 1718 183 37 23 chr2 112870656 112871005 -137816849 + MLT1A1 LTR MaLR 10 363 -2 528 170 50 28 chr2 112871285 112871426 -137816428 + MER104 DNA Tc2 35 178 -2 1669 197 64 59 chr2 112871574 112872030 -137815824 + MLT1E1 LTR MaLR 5 462 -192 1253 238 127 5 chr2 112872030 112872318 -137815536 - L1MC4 LINE L1 -1160 6882 6538 2375 113 0 0 chr2 112872318 112872629 -137815225 - AluSx SINE Alu -1 311 1 1253 238 127 5 chr2 112872629 112872710 -137815144 - L1MC4 LINE L1 -1504 6538 6468 317 305 139 7 chr2 112873521 112873672 -137814182 - MIR SINE MIR -64 198 28 349 303 29 57 chr2 112873780 112873955 -137813899 + MIR SINE MIR 47 216 -46 740 269 9 27 chr2 112874216 112874439 -137813415 - L2 LINE L2 -1052 2262 2044 2150 112 0 3 chr2 112874569 112874885 -137812969 - AluSx SINE Alu 0 315 1 952 193 28 0 chr2 112874885 112875061 -137812793 + MER58A DNA MER1_type 36 216 -8 1457 218 85 38 chr2 112875061 112875517 -137812337 + L1M4c LINE L1 2429 2916 -3466 2245 110 7 0 chr2 112875517 112875818 -137812036 - AluSx SINE Alu -9 303 1 1457 218 85 38 chr2 112875818 112875902 -137811952 + L1M4c LINE L1 2916 2995 -3387 1687 200 0 0 chr2 112876050 112876340 -137811514 + AluJb SINE Alu 10 299 -13 1258 151 65 5 chr2 112876366 112876565 -137811289 + AluJo SINE Alu 3 213 -99 1090 256 20 79 chr2 112876593 112877137 -137810717 + L1M4c LINE L1 3313 3824 -2558 1262 217 22 9 chr2 112877140 112877458 -137810396 + L1M4c LINE L1 4773 5094 -1288 1192 125 55 16 chr2 112877455 112877711 -137810143 - L1MDa LINE L1 -3968 2572 2307 * 6278 230 64 28 chr2 112877713 112879067 -137808787 - L1M4c LINE L1 -4133 2692 1389 2605 91 8 3 chr2 112879067 112879420 -137808434 + THE1A LTR MaLR 1 355 0 6278 230 64 28 chr2 112879420 112880008 -137807846 - L1M4c LINE L1 -5436 1389 824 186 71 0 0 chr2 112880008 112880036 -137807818 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 6278 230 64 28 chr2 112880036 112880549 -137807305 - L1M4c LINE L1 -6001 824 16 308 204 11 11 chr2 112880627 112880715 -137807139 + (TA)n Simple_repeat Simple_repeat 2 89 0 2052 117 13 28 chr2 112882234 112882551 -137805303 + AluSx SINE Alu 1 312 0 386 331 0 46 chr2 112882921 112883018 -137804836 - MER90 LTR ERV1 -1 613 522 1734 179 45 45 chr2 112883018 112883414 -137804440 - MSTD LTR MaLR 0 396 1 386 331 0 46 chr2 112883414 112883446 -137804408 - MER90 LTR ERV1 -92 522 490 1981 183 5 42 chr2 112884191 112884403 -137803451 - MLT1A1 LTR MaLR 0 365 171 2003 121 14 4 chr2 112884403 112884719 -137803135 - AluSx SINE Alu 0 319 1 1981 183 5 42 chr2 112884719 112884882 -137802972 - MLT1A1 LTR MaLR -194 171 3 1152 246 105 60 chr2 112885509 112885798 -137802056 - MLT1C LTR MaLR 0 467 192 369 0 0 0 chr2 112885798 112885839 -137802015 + (TG)n Simple_repeat Simple_repeat 2 42 0 1152 246 105 60 chr2 112885839 112885951 -137801903 - MLT1C LTR MaLR -275 192 42 2693 112 0 8 chr2 112885951 112886318 -137801536 + THE1B LTR MaLR 1 364 0 1152 246 105 60 chr2 112886318 112886362 -137801492 - MLT1C LTR MaLR -425 42 1 798 155 5 125 chr2 112886504 112886704 -137801150 + AluJb SINE Alu 137 312 0 548 242 124 7 chr2 112886843 112886996 -137800858 - MLT1I LTR MaLR -4 405 235 189 273 18 0 chr2 112887261 112887316 -137800538 - L2 LINE L2 -57 3256 3201 708 226 60 71 chr2 112888369 112888635 -137799219 + MLT1G LTR MaLR 2 264 -326 1056 201 158 26 chr2 112888865 112889138 -137798716 + MLT1G LTR MaLR 269 577 -13 1188 181 150 54 chr2 112889410 112889626 -137798228 - MER2 DNA MER2_type 0 344 87 2224 111 3 0 chr2 112889626 112889915 -137797939 - AluSx SINE Alu -22 290 1 1188 181 150 54 chr2 112889915 112890012 -137797842 - MER2 DNA MER2_type -257 87 1 392 335 43 5 chr2 112890057 112890245 -137797609 + L2 LINE L2 3103 3297 -16 26 0 0 0 chr2 112890904 112890930 -137796924 + AT_rich Low_complexity Low_complexity 1 26 0 2352 107 3 3 chr2 112891011 112891321 -137796533 - AluSx SINE Alu -2 310 1 210 286 0 44 chr2 112891884 112891975 -137795879 + GA-rich Low_complexity Low_complexity 3 89 0 1315 86 0 43 chr2 112893077 112893264 -137794590 - AluSg/x SINE Alu 0 312 134 326 219 35 26 chr2 112893293 112893407 -137794447 - L1ME4a LINE L1 0 6121 6007 2222 103 0 10 chr2 112895322 112895623 -137792231 - AluSx SINE Alu -14 298 1 1594 138 14 30 chr2 112895903 112896199 -137791655 - L1MB3 LINE L1 -2 6181 5891 1981 156 3 19 chr2 112896268 112896582 -137791272 + AluSx SINE Alu 1 309 -3 225 194 14 14 chr2 112896643 112896678 -137791176 + (CAAA)n Simple_repeat Simple_repeat 4 38 -37 10537 161 20 43 chr2 112896678 112899026 -137788828 + L1PA14 LINE L1 3432 5763 -398 2507 66 0 19 chr2 112899026 112899343 -137788511 + AluY SINE Alu 1 311 0 10537 161 20 43 chr2 112899343 112899732 -137788122 + L1PA14 LINE L1 5763 6159 -2 225 194 14 14 chr2 112899732 112899768 -137788086 + (CAAA)n Simple_repeat Simple_repeat 37 75 0 330 286 36 14 chr2 112902077 112902217 -137785637 + MER117 DNA MER1_type 15 157 -40 221 135 0 58 chr2 112903018 112903070 -137784784 + (TATATG)n Simple_repeat Simple_repeat 1 49 0 586 156 0 46 chr2 112903073 112903246 -137784608 + (TA)n Simple_repeat Simple_repeat 2 166 0 2190 124 0 0 chr2 112904745 112905044 -137782810 + AluSx SINE Alu 1 299 -13 216 125 0 50 chr2 112906912 112906952 -137780902 + (GGGTG)n Simple_repeat Simple_repeat 3 40 0 2837 184 133 87 chr2 112908019 112909345 -137778509 - L1MC5 LINE L1 -28 7933 6548 848 201 7 1 chr2 112909383 112909531 -137778323 - AluJo/FRAM SINE Alu -30 282 149 2233 122 3 0 chr2 112909531 112909551 -137778303 - AluSx SINE Alu 0 312 294 220 69 0 0 chr2 112909551 112909580 -137778274 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 2233 122 3 0 chr2 112909580 112909862 -137777992 - AluSx SINE Alu -18 294 1 848 201 7 1 chr2 112909862 112909876 -137777978 - AluJo/FRAM SINE Alu -163 149 137 2994 235 82 37 chr2 112910141 112910523 -137777331 - L1M4 LINE L1 -1105 5041 4678 2171 100 3 23 chr2 112910523 112910823 -137777031 + AluSq SINE Alu 1 294 -19 2994 235 82 37 chr2 112910823 112911576 -137776278 - L1M4 LINE L1 -1468 4678 3855 702 233 64 20 chr2 112911574 112911776 -137776078 - L1M4 LINE L1 -2535 3611 3401 * 265 270 198 33 chr2 112911883 112912246 -137775608 - HAL1 LINE L1 -384 2123 1701 181 186 93 0 chr2 112912926 112912969 -137774885 - L2 LINE L2 -5 3308 3262 1217 261 73 19 chr2 112913036 112913242 -137774612 - MLT1H LTR MaLR -87 462 269 198 71 0 0 chr2 112913242 112913270 -137774584 + (TGG)n Simple_repeat Simple_repeat 1 28 0 1217 261 73 19 chr2 112913270 112913489 -137774365 - MLT1H LTR MaLR -280 269 14 445 261 188 5 chr2 112915089 112915296 -137772558 + MIR SINE MIR 2 246 -16 249 280 86 40 chr2 112915454 112915629 -137772225 - L2 LINE L2 -246 3067 2885 219 200 22 0 chr2 112916489 112916534 -137771320 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 1545 165 95 43 chr2 112916978 112917401 -137770453 + MLT2D LTR ERVL 1 439 -25 226 170 75 0 chr2 112917452 112917505 -137770349 + MLT2D LTR ERVL 459 515 0 333 275 107 13 chr2 112918767 112918916 -137768938 - MER69A DNA AcHobo -14 163 1 245 224 136 24 chr2 112919502 112919627 -137768227 + L1ME4a LINE L1 5981 6119 -2 261 336 106 0 chr2 112920769 112920873 -137766981 + MIR SINE MIR 35 149 -113 186 71 0 0 chr2 112921396 112921424 -137766430 + (TGG)n Simple_repeat Simple_repeat 2 29 0 385 237 82 37 chr2 112921509 112921572 -137766282 - L1ME4a LINE L1 -2 6119 6060 2236 119 0 0 chr2 112921572 112921866 -137765988 + AluSx SINE Alu 1 294 -18 385 237 82 37 chr2 112921866 112921937 -137765917 - L1ME4a LINE L1 -61 6060 5979 1545 129 165 0 chr2 112922120 112922368 -137765486 - AluJb SINE Alu -23 289 1 2511 59 7 3 chr2 112922376 112922681 -137765173 - AluY SINE Alu -5 306 1 1756 188 13 13 chr2 112922727 112922894 -137764960 - AluJb SINE Alu -8 304 135 2194 107 0 23 chr2 112922894 112923223 -137764631 - AluSx SINE Alu 0 312 1 1756 188 13 13 chr2 112923223 112923359 -137764495 - AluJb SINE Alu -176 136 1 541 168 56 0 chr2 112923412 112923519 -137764335 + MLT1B LTR MaLR 230 342 -48 2553 18 0 0 chr2 112924459 112924774 -137763080 - AluY SINE Alu 0 315 1 383 250 24 0 chr2 112925046 112925130 -137762724 - L1MC1 LINE L1 -16 6317 6232 912 175 0 0 chr2 112925133 112925351 -137762503 + (CA)n Simple_repeat Simple_repeat 1 218 0 1661 173 41 0 chr2 112926523 112926794 -137761060 - AluJo SINE Alu -30 282 1 209 211 0 0 chr2 112927221 112927259 -137760595 - MIR SINE MIR -11 251 214 823 268 162 10 chr2 112928211 112928680 -137759174 + L2 LINE L2 2741 3270 -43 217 265 0 0 chr2 112928680 112928729 -137759125 + L2 LINE L2 3247 3295 -18 662 284 98 41 chr2 112928740 112929159 -137758695 - L2 LINE L2 0 3313 2871 214 405 24 18 chr2 112929223 112929391 -137758463 + MIR SINE MIR 80 248 -14 574 272 110 37 chr2 112929833 112930024 -137757830 - MIR SINE MIR -55 207 3 2224 130 0 0 chr2 112930528 112930835 -137757019 - AluSx SINE Alu -5 307 1 348 256 125 54 chr2 112932031 112932199 -137755655 - MER5A DNA MER1_type -7 182 3 477 0 0 0 chr2 112932354 112932407 -137755447 + (TTATG)n Simple_repeat Simple_repeat 4 56 0 2171 95 3 7 chr2 112933474 112933757 -137754097 + AluSx SINE Alu 1 282 -30 187 54 54 0 chr2 112933763 112933800 -137754054 + A-rich Low_complexity Low_complexity 2 40 0 390 316 23 0 chr2 112934085 112934218 -137753636 - L2 LINE L2 0 3272 3137 2434 105 0 3 chr2 112934443 112934757 -137753097 + AluSq SINE Alu 1 313 0 1950 117 0 11 chr2 112934778 112935043 -137752811 + AluSx SINE Alu 50 311 -1 772 257 133 65 chr2 112935259 112935855 -137751999 - L2 LINE L2 -628 2686 2051 186 231 0 0 chr2 112936027 112936066 -137751788 + L2 LINE L2 3273 3311 -2 1992 77 0 16 chr2 112936286 112936534 -137751320 - AluY SINE Alu -67 244 1 244 230 54 0 chr2 112936554 112936628 -137751226 - L1MC5 LINE L1 -36 7925 7848 375 191 73 29 chr2 112936642 112936778 -137751076 - L1MC5 LINE L1 -309 7652 7511 32 43 0 0 chr2 112987233 112987279 -137700575 + GC_rich Low_complexity Low_complexity 1 46 0 487 284 51 57 chr2 112988223 112988519 -137699335 - MLT1J LTR MaLR -196 315 22 2175 113 0 3 chr2 112989261 112989572 -137698282 - AluSx SINE Alu -2 310 1 2065 135 0 0 chr2 112989953 112990257 -137697597 - AluSx SINE Alu -8 304 1 21 0 0 0 chr2 112990265 112990286 -137697568 + AT_rich Low_complexity Low_complexity 1 21 0 1039 254 107 5 chr2 112991185 112991598 -137696256 - LTR16A1 LTR ERVL -2 455 1 396 256 39 37 chr2 112991701 112991841 -137696013 + MIR SINE MIR 61 237 -25 435 229 48 0 chr2 112991851 112991956 -137695898 + MIR SINE MIR 116 225 -37 205 216 164 61 chr2 112992565 112992694 -137695160 + MIR SINE MIR 16 165 -55 4601 151 74 81 chr2 112993390 112993483 -137694371 - Charlie5 DNA MER1_type 0 2624 2532 2170 116 0 0 chr2 112993483 112993784 -137694070 + AluSx SINE Alu 1 301 -11 4601 151 74 81 chr2 112993784 112993815 -137694039 - Charlie5 DNA MER1_type -92 2532 2502 2214 89 0 3 chr2 112993815 112994108 -137693746 + AluSc SINE Alu 2 293 -16 4601 151 74 81 chr2 112994108 112995141 -137692713 - Charlie5 DNA MER1_type -122 2502 1472 1872 146 7 13 chr2 112995141 112995450 -137692404 + AluSx SINE Alu 1 307 -5 4601 151 74 81 chr2 112995450 112995502 -137692352 - Charlie5 DNA MER1_type -1152 1472 1421 301 225 100 0 chr2 112995502 112995582 -137692272 - Charlie5 DNA MER1_type -1155 1457 1370 896 130 0 7 chr2 112995719 112995857 -137691997 - MER41C LTR ERV1 -69 485 349 360 0 0 0 chr2 112995859 112995899 -137691955 + (CA)n Simple_repeat Simple_repeat 2 41 0 354 177 0 26 chr2 112995900 112996013 -137691841 + (TA)n Simple_repeat Simple_repeat 2 111 0 332 265 34 19 chr2 112996022 112996161 -137691693 + L1MC4 LINE L1 6614 6703 -1339 2109 127 60 0 chr2 112996161 112996492 -137691362 - MER41C LTR ERV1 -203 351 1 1875 167 21 12 chr2 112996496 112996972 -137690882 + L1MC3 LINE L1 7162 7785 0 2340 80 0 16 chr2 112997252 112997566 -137690288 + AluSx SINE Alu 1 309 -3 2367 85 0 0 chr2 112997632 112997939 -137689915 + AluY SINE Alu 1 307 -4 270 200 100 0 chr2 112998534 112998604 -137689250 + MLT1E-int LTR MaLR 692 768 -603 2065 107 0 3 chr2 112998791 112999082 -137688772 + AluSx SINE Alu 3 292 -20 820 261 53 98 chr2 112999107 112999282 -137688572 + MLT1E-int LTR MaLR 961 1142 -229 2216 136 8 35 chr2 112999282 112999656 -137688198 + THE1B LTR MaLR 1 364 0 820 261 53 98 chr2 112999656 112999910 -137687944 + MLT1E-int LTR MaLR 1142 1371 0 1886 258 68 32 chr2 112999910 113000053 -137687801 + MLT1E LTR MaLR 1 137 -456 4204 135 13 3 chr2 113000053 113000682 -137687172 - MER41B LTR ERV1 0 635 1 1886 258 68 32 chr2 113000682 113001100 -137686754 + MLT1E LTR MaLR 137 582 -11 2122 207 88 19 chr2 113001101 113001588 -137686266 - MLT1F LTR MaLR -19 523 3 344 301 140 42 chr2 113001621 113001977 -137685877 + MLT1J LTR MaLR 71 461 -50 459 259 44 19 chr2 113002456 113002614 -137685240 - HERV16 LTR ERVL -3853 1143 982 321 256 93 0 chr2 113002726 113002812 -137685042 - L1MC4 LINE L1 -1333 6709 6616 199 123 0 68 chr2 113002894 113002967 -137684887 + (TA)n Simple_repeat Simple_repeat 2 69 0 204 67 0 0 chr2 113002977 113003007 -137684847 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 1702 224 105 22 chr2 113003009 113003468 -137684386 - MLT2B3 LTR ERVL -50 504 8 551 152 0 0 chr2 113003674 113003753 -137684101 - AluJ/FLAM SINE Alu -219 93 15 383 242 30 10 chr2 113003765 113003864 -137683990 - LTR16A1 LTR ERVL -336 121 21 285 296 124 35 chr2 113003879 113004048 -137683806 - MLT1K LTR MaLR -395 193 10 4567 336 57 26 chr2 113004753 113004864 -137682990 + ERVL LTR ERVL 2266 2372 -3392 2305 76 0 3 chr2 113004864 113005168 -137682686 + AluY SINE Alu 1 303 -8 4567 336 57 26 chr2 113005168 113005461 -137682393 + ERVL LTR ERVL 2372 2655 -3109 186 43 0 0 chr2 113005461 113005484 -137682370 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 2102 61 0 4 chr2 113005484 113005746 -137682108 - AluY SINE Alu -50 261 1 4567 336 57 26 chr2 113005746 113006879 -137680975 + ERVL LTR ERVL 2655 3752 -2012 2699 93 25 0 chr2 113006879 113007245 -137680609 - THE1C LTR MaLR 0 375 1 4567 336 57 26 chr2 113007245 113008315 -137679539 + ERVL LTR ERVL 3752 4956 -808 1350 245 60 18 chr2 113008319 113008756 -137679098 + LTR16A1 LTR ERVL 2 456 -1 437 280 33 27 chr2 113008850 113009000 -137678854 + MLT1K LTR MaLR 322 472 -116 198 296 11 23 chr2 113010153 113010241 -137677613 - MIR SINE MIR -30 232 146 480 155 49 120 chr2 113010241 113010305 -137677549 - L1MA8 LINE L1 0 6291 6241 2146 116 3 0 chr2 113010305 113010615 -137677239 - AluSp SINE Alu -2 311 1 480 155 49 120 chr2 113010615 113010692 -137677162 - L1MA8 LINE L1 -50 6241 6160 297 322 16 33 chr2 113010694 113010815 -137677039 - MIR SINE MIR -117 145 27 305 192 26 39 chr2 113010954 113011032 -137676822 - LTR33A LTR ERVL -13 510 434 1919 130 4 0 chr2 113011656 113011933 -137675921 - AluSx SINE Alu -17 295 18 251 268 0 28 chr2 113012002 113012073 -137675781 + L1ME1 LINE L1 816 884 -5658 * 1204 198 0 13 chr2 113012068 113012305 -137675549 + AluJo SINE Alu 73 306 -6 1533 248 101 20 chr2 113012311 113012863 -137674991 + L1ME1 LINE L1 1319 1915 -4731 408 185 0 0 chr2 113012869 113012934 -137674920 + FLAM_A SINE Alu 1 65 -67 3654 201 47 19 chr2 113012939 113014193 -137673661 + L1ME1 LINE L1 5361 6655 -9 2207 93 13 7 chr2 113014214 113014514 -137673340 + AluSp SINE Alu 1 302 -11 313 257 55 112 chr2 113014707 113014868 -137672986 - LTR33A LTR ERVL -394 129 1 480 171 23 52 chr2 113014915 113015083 -137672771 - L1MD1 LINE L1 -5 7990 6086 531 264 149 19 chr2 113015459 113015667 -137672187 + MIR SINE MIR 13 247 -15 613 209 32 128 chr2 113015689 113015942 -137671912 - MLT1F LTR MaLR -329 238 1 1599 187 22 0 chr2 113016124 113016402 -137671452 + AluJb SINE Alu 1 284 -28 300 53 0 0 chr2 113016402 113016440 -137671414 + (CA)n Simple_repeat Simple_repeat 2 39 0 11360 155 22 26 chr2 113016450 113019450 -137668404 + L1MA4 LINE L1 3226 6205 -95 2299 40 48 0 chr2 113019495 113019768 -137668086 + AluY SINE Alu 1 286 -25 2251 114 0 0 chr2 113020352 113020651 -137667203 + AluSx SINE Alu 1 299 -13 290 210 240 10 chr2 113020668 113020768 -137667086 + L2 LINE L2 3189 3311 -2 1834 139 44 24 chr2 113021466 113021760 -137666094 + AluJb SINE Alu 1 300 -12 474 108 0 0 chr2 113021764 113021838 -137666016 + (TG)n Simple_repeat Simple_repeat 2 75 0 376 286 143 0 chr2 113022012 113022180 -137665674 - MIR SINE MIR -13 249 58 2195 119 0 0 chr2 113022907 113023201 -137664653 + AluSx SINE Alu 1 294 -18 2310 107 0 0 chr2 113023494 113023793 -137664061 + AluSx SINE Alu 1 299 -13 184 355 0 24 chr2 113023877 113024001 -137663853 - L2 LINE L2 -605 2709 2589 1887 274 29 39 chr2 113024140 113024732 -137663122 + MER115 DNA AcHobo 51 636 -57 922 243 64 62 chr2 113024872 113024989 -137662865 - L1M4 LINE L1 -789 5357 5242 384 22 0 0 chr2 113024989 113025034 -137662820 + (CA)n Simple_repeat Simple_repeat 2 46 0 922 243 64 62 chr2 113025034 113025221 -137662633 - L1M4 LINE L1 -904 5242 5057 871 199 7 0 chr2 113025221 113025372 -137662482 - FRAM SINE Alu -11 155 4 922 243 64 62 chr2 113025372 113025580 -137662274 - L1M4 LINE L1 -1089 5057 4843 848 291 31 25 chr2 113025637 113025956 -137661898 - MER115 DNA AcHobo -321 372 52 246 190 63 146 chr2 113026102 113026260 -137661594 - L1M4 LINE L1 -1329 4817 4673 1205 123 0 6 chr2 113026288 113026459 -137661395 - AluSx SINE Alu 0 310 141 1043 112 0 14 chr2 113026545 113026688 -137661166 - AluSx SINE Alu -171 141 1 1415 249 50 9 chr2 113026690 113027155 -137660699 - L1M4 LINE L1 -1478 4668 4185 308 194 121 151 chr2 113027177 113027383 -137660471 - L1 LINE L1 -1743 4403 4204 1013 253 97 80 chr2 113027385 113027518 -137660336 - L1 LINE L1 -2661 3485 3356 2384 69 7 10 chr2 113027518 113027824 -137660030 - AluSp SINE Alu -8 305 1 1013 253 97 80 chr2 113027824 113028175 -137659679 - L1 LINE L1 -2790 3356 2980 2282 31 0 62 chr2 113028175 113028489 -137659365 + AluY SINE Alu 13 308 0 1013 253 97 80 chr2 113028489 113028766 -137659088 - L1 LINE L1 -3166 2980 2709 309 303 17 50 chr2 113028816 113028935 -137658919 - MLT1J1 LTR MaLR -250 196 82 1953 133 0 4 chr2 113029196 113029474 -137658380 + AluSx SINE Alu 1 277 -35 327 25 0 0 chr2 113029477 113029517 -137658337 + (CA)n Simple_repeat Simple_repeat 2 41 0 844 130 0 0 chr2 113029563 113029686 -137658168 + FLAM_C SINE Alu 2 124 -9 671 304 68 37 chr2 113029965 113030346 -137657508 - LTR16C LTR ERVL -1 490 98 2215 103 3 3 chr2 113031278 113031568 -137656286 - AluSx SINE Alu -22 290 1 4632 187 139 36 chr2 113031568 113031710 -137656144 - Charlie5 DNA MER1_type -1239 1385 1259 2202 94 0 0 chr2 113031710 113031986 -137655868 - AluY SINE Alu -35 276 1 4632 187 139 36 chr2 113031986 113032999 -137654855 - Charlie5 DNA MER1_type -1365 1259 87 2031 123 3 43 chr2 113032999 113033144 -137654710 + AluSx SINE Alu 1 150 -162 2523 44 3 3 chr2 113033144 113033437 -137654417 + AluY SINE Alu 1 293 -18 2031 123 3 43 chr2 113033437 113033616 -137654238 + AluSx SINE Alu 150 312 0 4632 187 139 36 chr2 113033616 113033714 -137654140 - Charlie5 DNA MER1_type -2537 87 1 186 234 94 0 chr2 113034099 113034163 -137653691 + MIR SINE MIR 73 142 -120 1182 303 112 25 chr2 113035178 113035855 -137651999 + L2 LINE L2 2191 2926 -388 208 297 234 0 chr2 113036027 113036138 -137651716 + L2 LINE L2 3136 3272 0 2281 79 24 10 chr2 113036260 113036552 -137651302 + AluY SINE Alu 1 296 -15 278 263 32 11 chr2 113037113 113037208 -137650646 + L2 LINE L2 2515 2611 -703 34 0 0 0 chr2 113037321 113037355 -137650499 + AT_rich Low_complexity Low_complexity 1 34 0 408 20 0 0 chr2 113037355 113037404 -137650450 + (TG)n Simple_repeat Simple_repeat 2 50 0 1787 149 0 72 chr2 113037405 113037526 -137650328 - AluJb SINE Alu -14 298 170 2404 73 0 0 chr2 113037526 113037813 -137650041 - AluY SINE Alu -22 289 3 1787 149 0 72 chr2 113037813 113038012 -137649842 - AluJb SINE Alu -142 170 1 22 35 0 0 chr2 113038223 113038252 -137649602 + AT_rich Low_complexity Low_complexity 1 29 0 347 218 0 26 chr2 113038547 113038625 -137649229 + L1MC/D LINE L1 5421 5496 -863 * 2594 243 48 88 chr2 113038619 113038737 -137649117 + L1MB7 LINE L1 4269 4390 -1756 2095 121 7 3 chr2 113038737 113039035 -137648819 + AluSq SINE Alu 1 299 -14 2594 243 48 88 chr2 113039035 113039317 -137648537 + L1MB7 LINE L1 4390 4682 -1464 1593 100 0 5 chr2 113039317 113039527 -137648327 + AluSq SINE Alu 1 209 -104 2594 243 48 88 chr2 113039527 113039732 -137648122 + L1MB7 LINE L1 4682 4893 -1253 1810 118 68 7 chr2 113039732 113040011 -137647843 + AluSx SINE Alu 1 296 -16 2594 243 48 88 chr2 113040011 113040500 -137647354 + L1MB7 LINE L1 4893 5322 -824 298 197 28 28 chr2 113040501 113040572 -137647282 + AluJo SINE Alu 92 162 -140 2374 157 75 38 chr2 113040586 113040986 -137646868 + L1MB7 LINE L1 5654 6078 -106 2250 99 0 7 chr2 113040986 113041303 -137646551 + AluSg SINE Alu 1 310 0 2374 157 75 38 chr2 113041303 113041405 -137646449 + L1MB7 LINE L1 6078 6175 -9 2285 93 7 3 chr2 113042281 113042581 -137645273 + AluSx SINE Alu 1 301 -11 2356 100 0 0 chr2 113043050 113043349 -137644505 + AluSq SINE Alu 1 299 -14 491 274 43 0 chr2 113043906 113044070 -137643784 - L1MDa LINE L1 -2699 3727 3557 240 35 0 0 chr2 113044071 113044100 -137643754 + (TG)n Simple_repeat Simple_repeat 2 30 0 1740 84 5 0 chr2 113044138 113044352 -137643502 - AluSp SINE Alu -24 289 75 180 0 0 0 chr2 113044352 113044372 -137643482 + (T)n Simple_repeat Simple_repeat 1 20 0 43938 29 21 2 chr2 113044506 113050539 -137637315 - L1HS LINE L1 0 6155 2 648 114 0 0 chr2 113050539 113050627 -137637227 - AluSp SINE Alu -224 88 1 1932 190 144 106 chr2 113050628 113050825 -137637029 - L1MDa LINE L1 -2868 3558 3370 1710 192 10 7 chr2 113050825 113051122 -137636732 - AluJo SINE Alu -14 298 1 1932 190 144 106 chr2 113051122 113051167 -137636687 - L1MDa LINE L1 -3056 3370 3328 1645 98 5 0 chr2 113051167 113051381 -137636473 - AluSp SINE Alu -15 298 84 1932 190 144 106 chr2 113051381 113051708 -137636146 - L1MDa LINE L1 -3098 3328 3015 1735 180 37 7 chr2 113051708 113052002 -137635852 - AluJb SINE Alu -9 303 1 1932 190 144 106 chr2 113052002 113052021 -137635833 - L1MDa LINE L1 -3411 3015 2998 319 53 0 0 chr2 113052021 113052059 -137635795 - U2 snRNA snRNA -150 38 1 1932 190 144 106 chr2 113052059 113052249 -137635605 - L1MDa LINE L1 -3428 2998 2817 2002 146 6 19 chr2 113052249 113052564 -137635290 - AluJb SINE Alu -1 311 1 1932 190 144 106 chr2 113052564 113052676 -137635178 - L1MDa LINE L1 -3609 2817 2711 198 0 0 0 chr2 113052676 113052698 -137635156 + (CTATT)n Simple_repeat Simple_repeat 3 24 0 1932 190 144 106 chr2 113052698 113052775 -137635079 - L1MDa LINE L1 -3715 2711 2638 2177 104 0 11 chr2 113052775 113052952 -137634902 - AluSp SINE Alu 0 310 136 2521 69 0 0 chr2 113052952 113053255 -137634599 - AluY SINE Alu -8 303 1 2177 104 0 11 chr2 113053255 113053390 -137634464 - AluSp SINE Alu -174 136 1 1932 190 144 106 chr2 113053390 113054253 -137633601 - L1MDa LINE L1 -3788 2638 1631 376 259 9 0 chr2 113054253 113054369 -137633485 + (TA)n Simple_repeat Simple_repeat 2 118 0 580 292 68 54 chr2 113054685 113054795 -137633059 - L1MEc LINE L1 -4576 1820 1713 1977 143 10 3 chr2 113054795 113055088 -137632766 + AluSx SINE Alu 1 295 -17 580 292 68 54 chr2 113055088 113055776 -137632078 - L1MEc LINE L1 -4683 1713 1011 494 241 12 1 chr2 113055918 113056086 -137631768 + MER58 DNA MER1_type 26 2420 0 1292 254 79 32 chr2 113056203 113056359 -137631495 - L1ME3 LINE L1 0 6162 6015 2170 92 3 3 chr2 113056359 113056693 -137631161 + AluY SINE Alu 1 334 0 1292 254 79 32 chr2 113056693 113056940 -137630914 - L1ME3 LINE L1 -147 6015 5738 389 240 146 94 chr2 113056937 113057087 -137630767 - L1ME3 LINE L1 -1119 5027 4855 * 2301 109 0 0 chr2 113057087 113057372 -137630482 + AluSg SINE Alu 1 285 -25 389 240 146 94 chr2 113057372 113057488 -137630366 - L1ME3 LINE L1 -1291 4855 4747 207 0 0 0 chr2 113057850 113057873 -137629981 + (A)n Simple_repeat Simple_repeat 1 23 0 2071 141 0 3 chr2 113057937 113058242 -137629612 - AluSx SINE Alu -8 304 1 22 56 0 0 chr2 113058316 113058352 -137629502 + AT_rich Low_complexity Low_complexity 1 36 0 1759 138 7 31 chr2 113058354 113058643 -137629211 + AluJb SINE Alu 1 282 -30 1829 111 0 102 chr2 113058647 113058972 -137628882 - AluSx SINE Alu -20 292 1 21 36 0 0 chr2 113059084 113059112 -137628742 + AT_rich Low_complexity Low_complexity 1 28 0 2190 128 3 0 chr2 113059356 113059668 -137628186 - AluSq SINE Alu 0 313 1 189 0 0 0 chr2 113060244 113060265 -137627589 + (T)n Simple_repeat Simple_repeat 1 21 0 2493 81 3 0 chr2 113060542 113060849 -137627005 + AluSp SINE Alu 1 308 -5 1895 135 7 40 chr2 113061317 113061621 -137626233 + AluJb SINE Alu 1 294 -18 199 324 81 54 chr2 113062371 113062630 -137625224 - L2 LINE L2 -41 3231 2966 576 311 75 18 chr2 113062679 113063119 -137624735 + L2 LINE L2 1517 1981 -1333 200 256 158 24 chr2 113063219 113063301 -137624553 + L2 LINE L2 2123 2215 -1099 201 74 0 0 chr2 113063850 113063877 -137623977 + (CCA)n Simple_repeat Simple_repeat 1 27 0 306 67 0 0 chr2 113064022 113064067 -137623787 + (TG)n Simple_repeat Simple_repeat 2 46 0 29490 46 3 6 chr2 113064491 113068930 -137618924 - L1PA5 LINE L1 -3 6151 1727 2021 135 0 14 chr2 113069012 113069309 -137618545 + AluJo SINE Alu 2 294 -18 73 23 0 0 chr2 113071586 113071673 -137616181 + AT_rich Low_complexity Low_complexity 1 87 0 1007 177 0 6 chr2 113071673 113071837 -137616017 - FAM SINE Alu -12 163 1 220 309 52 59 chr2 113072017 113072153 -137615701 + MIR SINE MIR 57 191 -71 296 248 10 69 chr2 113072185 113072286 -137615568 + MER5B DNA MER1_type 5 99 -79 745 185 121 0 chr2 113073177 113073334 -137614520 + AluJb SINE Alu 132 307 -5 503 190 348 0 chr2 113073357 113073515 -137614339 - MER58C DNA MER1_type 0 215 3 1795 169 126 14 chr2 113074169 113074525 -137613329 - MSTD LTR MaLR 0 396 1 2756 228 80 17 chr2 113074630 113074753 -137613101 + L1M4 LINE L1 -254 4294967156 -6420 2345 62 3 14 chr2 113074753 113075044 -137612810 + AluY SINE Alu 21 308 -3 2756 228 80 17 chr2 113075044 113075610 -137612244 + L1M4 LINE L1 -140 478 -5802 294 240 8 25 chr2 113075611 113075732 -137612122 + GA-rich Low_complexity Low_complexity 2 120 0 1299 249 29 20 chr2 113075746 113076203 -137611651 + L1M4 LINE L1 1029 1532 -4850 832 197 52 31 chr2 113076202 113076492 -137611362 + L1M4 LINE L1 2189 2484 -3900 * 975 232 0 5 chr2 113076492 113076699 -137611155 - AluJo SINE Alu -6 306 101 1554 111 14 0 chr2 113076711 113076928 -137610926 - L1MA3 LINE L1 -413 5892 5673 685 206 0 15 chr2 113076934 113077065 -137610789 - FLAM_A SINE Alu -4 129 1 763 215 0 0 chr2 113077066 113077229 -137610625 + L1M4 LINE L1 2473 2635 -3747 * 4952 127 27 22 chr2 113077225 113077771 -137610083 - L1PA16 LINE L1 -1 6165 5623 216 0 0 0 chr2 113077771 113077795 -137610059 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2183 101 0 0 chr2 113077797 113078074 -137609780 - AluSx SINE Alu -35 277 1 4952 127 27 22 chr2 113078074 113078327 -137609527 - L1PA16 LINE L1 -543 5623 5359 2018 215 28 0 chr2 113078327 113078755 -137609099 + L1M4 LINE L1 2626 3065 -3317 6432 192 54 62 chr2 113078822 113079156 -137608698 + L1M4 LINE L1 3734 4069 -2313 1458 118 10 94 chr2 113079156 113079188 -137608666 + L1PA16 LINE L1 5903 5936 -230 1747 169 3 10 chr2 113079188 113079484 -137608370 + AluSx SINE Alu 1 294 -18 1458 118 10 94 chr2 113079484 113079529 -137608325 + L1PA16 LINE L1 5936 5983 -183 2357 87 13 0 chr2 113079529 113079829 -137608025 + AluY SINE Alu 1 304 -7 1458 118 10 94 chr2 113079829 113080038 -137607816 + L1PA16 LINE L1 5983 6166 0 6432 192 54 62 chr2 113080038 113080849 -137607005 + L1M4 LINE L1 4069 4884 -1498 2032 126 68 0 chr2 113080849 113081142 -137606712 + AluSq SINE Alu 1 313 0 6432 192 54 62 chr2 113081142 113081581 -137606273 + L1M4 LINE L1 4884 5307 -1075 1290 155 40 28 chr2 113081581 113081832 -137606022 + L1MA3 LINE L1 6043 6296 -9 6432 192 54 62 chr2 113081832 113082049 -137605805 + L1M4 LINE L1 5307 5524 -858 599 126 11 0 chr2 113082064 113082159 -137605695 + AluJ/FLAM SINE Alu 4 99 -213 438 264 47 0 chr2 113082258 113082406 -137605448 + L1MA10 LINE L1 6175 6329 -5 1790 154 10 20 chr2 113084496 113084794 -137603060 + AluJo SINE Alu 1 295 -17 2215 103 7 3 chr2 113084842 113085134 -137602720 + AluSx SINE Alu 1 293 -19 962 140 155 5 chr2 113085139 113085346 -137602508 - Charlie1 DNA MER1_type -159 2602 2365 749 161 75 70 chr2 113085345 113085531 -137602323 - Charlie1 DNA MER1_type -1884 877 691 * 1819 198 151 40 chr2 113085557 113086028 -137601826 - MER82 DNA MER2_type 0 653 131 1245 174 140 0 chr2 113086030 113086265 -137601589 - MER82 DNA MER2_type -385 268 1 261 206 265 22 chr2 113086275 113086340 -137601514 - Charlie1 DNA MER1_type -2117 644 596 1850 164 3 20 chr2 113086340 113086638 -137601216 - AluJo SINE Alu -19 293 1 261 206 265 22 chr2 113086638 113086708 -137601146 - Charlie1 DNA MER1_type -2165 596 476 335 211 66 0 chr2 113087092 113087168 -137600686 + L2 LINE L2 3209 3289 -24 2711 42 0 6 chr2 113087243 113087556 -137600298 - AluY SINE Alu 0 311 1 840 176 18 29 chr2 113088593 113088763 -137599091 + AluJb SINE Alu 134 301 -11 524 272 88 18 chr2 113088933 113089150 -137598704 + MIR SINE MIR 28 259 -3 2516 71 0 0 chr2 113089297 113089605 -137598249 - AluY SINE Alu -3 308 1 878 148 0 15 chr2 113090195 113090330 -137597524 - FLAM_C SINE Alu 0 133 1 1087 142 102 64 chr2 113090387 113090682 -137597172 + L1MA9 LINE L1 5987 6292 -20 291 345 134 12 chr2 113090898 113091069 -137596785 - L3 LINE CR1 -30 1547 1356 317 257 0 0 chr2 113091359 113091433 -137596421 + MER20 DNA MER1_type 2 75 -144 1734 206 98 54 chr2 113091791 113092310 -137595544 - MLT1F LTR MaLR 0 542 1 441 191 232 36 chr2 113092907 113093127 -137594727 - L1MC4 LINE L1 -1 8041 7779 466 234 63 0 chr2 113093134 113093245 -137594609 + MER3 DNA MER1_type 39 156 -53 1324 243 21 0 chr2 113093781 113094065 -137593789 - MER82 DNA MER2_type -2 651 362 1421 170 0 5 chr2 113094083 113094306 -137593548 - AluJb SINE Alu -90 222 1 1031 211 37 11 chr2 113094309 113094575 -137593279 - MER82 DNA MER2_type -281 372 1 1031 101 0 0 chr2 113094691 113094820 -137593034 - AluSq/x SINE Alu -183 129 1 2344 100 0 0 chr2 113094825 113095125 -137592729 - AluSx SINE Alu -12 300 1 1499 170 29 56 chr2 113095455 113095591 -137592263 + AluJb SINE Alu 5 143 -169 1910 165 0 0 chr2 113095591 113095882 -137591972 + AluSx SINE Alu 1 291 -21 1499 170 29 56 chr2 113095882 113096051 -137591803 + AluJb SINE Alu 143 302 -10 1755 150 0 36 chr2 113096053 113096359 -137591495 + AluJb SINE Alu 3 297 -15 1481 132 0 54 chr2 113097504 113097694 -137590160 - L1MA5 LINE L1 0 6300 6128 1524 143 4 13 chr2 113097694 113097924 -137589930 + AluJo SINE Alu 1 228 -84 1481 132 0 54 chr2 113097924 113098013 -137589841 - L1MA5 LINE L1 -172 6128 6036 1308 152 80 62 chr2 113098274 113098563 -137589291 - AluJb SINE Alu -18 294 1 21 0 0 0 chr2 113098570 113098591 -137589263 + AT_rich Low_complexity Low_complexity 1 21 0 966 189 6 0 chr2 113099110 113099269 -137588585 + AluJb SINE Alu 137 296 -16 1906 163 3 0 chr2 113099310 113099610 -137588244 - AluJb SINE Alu -11 301 1 2536 71 0 0 chr2 113100311 113100622 -137587232 - AluY SINE Alu 0 311 1 605 198 0 25 chr2 113100840 113100961 -137586893 + FRAM SINE Alu 55 172 -4 2095 126 0 27 chr2 113101467 113101768 -137586086 + AluSx SINE Alu 1 293 -19 1553 188 94 9 chr2 113102178 113102507 -137585347 + MER82 DNA MER2_type 1 357 -296 242 28 0 28 chr2 113102508 113102544 -137585310 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 856 123 0 0 chr2 113102544 113102658 -137585196 - FLAM_C SINE Alu -23 120 7 1040 221 101 16 chr2 113102702 113102960 -137584894 + MER82 DNA MER2_type 374 653 0 3657 110 106 65 chr2 113103131 113103408 -137584446 - Tigger1 DNA MER2_type 0 2418 2154 2310 96 10 10 chr2 113103408 113103721 -137584133 - AluSp SINE Alu 0 313 1 3657 110 106 65 chr2 113103721 113103737 -137584117 - Tigger1 DNA MER2_type -264 2154 2140 2658 48 0 3 chr2 113103737 113104047 -137583807 - AluY SINE Alu -2 309 1 3657 110 106 65 chr2 113104047 113104309 -137583545 - Tigger1 DNA MER2_type -278 2140 1826 1975 136 17 14 chr2 113104309 113104603 -137583251 + AluJo SINE Alu 2 296 -16 3657 110 106 65 chr2 113104603 113104737 -137583117 - Tigger1 DNA MER2_type -592 1826 1699 924 147 19 6 chr2 113104734 113104891 -137582963 - Tigger1 DNA MER2_type -2167 251 93 * 724 193 10 46 chr2 113105741 113105938 -137581916 - L1M3 LINE L1 -391 5789 5600 * 814 278 75 12 chr2 113105917 113106237 -137581617 - L1MC4 LINE L1 -7 8035 7696 921 190 11 17 chr2 113106238 113106417 -137581437 - AluJb SINE Alu 0 312 135 1367 130 19 0 chr2 113106422 113106630 -137581224 - MER21B LTR ERV1 -540 323 112 1033 140 35 12 chr2 113106654 113106825 -137581029 - AluSx SINE Alu -115 197 23 1197 228 79 50 chr2 113106877 113107321 -137580533 - L1MC4 LINE L1 -618 7424 6968 593 144 99 0 chr2 113107317 113107428 -137580426 - L1MB3 LINE L1 -58 6125 6004 * 1829 121 0 0 chr2 113107428 113107677 -137580177 - AluSx SINE Alu -15 297 49 1044 165 15 20 chr2 113107757 113107976 -137579878 - L1MA9 LINE L1 -158 6147 5952 261 0 0 0 chr2 113107988 113108017 -137579837 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2152 112 20 0 chr2 113108074 113108368 -137579486 - AluJb SINE Alu -12 300 1 680 223 98 59 chr2 113109620 113109907 -137577947 - L1MC4 LINE L1 -259 7783 7486 938 259 20 23 chr2 113109926 113110231 -137577623 - L1ME LINE L1 -4580 1681 1378 2344 97 3 0 chr2 113110251 113110551 -137577303 - AluSx SINE Alu -11 301 1 1061 240 98 119 chr2 113110572 113110743 -137577111 - L1ME LINE L1 -4929 1074 901 2109 138 3 0 chr2 113110743 113111040 -137576814 - AluSx SINE Alu -14 298 1 1061 240 98 119 chr2 113111040 113111112 -137576742 - L1ME LINE L1 -5102 901 829 1693 156 94 6 chr2 113111112 113111432 -137576422 - MER7A DNA MER2_type 0 346 1 1061 240 98 119 chr2 113111432 113111460 -137576394 - L1ME LINE L1 -5174 829 802 2357 115 0 3 chr2 113111460 113111772 -137576082 - AluSx SINE Alu -1 311 1 1061 240 98 119 chr2 113111772 113112677 -137575177 - L1ME LINE L1 -5201 802 12 260 269 81 45 chr2 113112966 113113189 -137574665 - L1ME2 LINE L1 -208 5956 5726 181 26 53 26 chr2 113113766 113113804 -137574050 + (TTTG)n Simple_repeat Simple_repeat 2 176 0 2223 96 0 0 chr2 113113804 113114095 -137573759 - AluSx SINE Alu -21 291 1 1814 143 10 3 chr2 113114530 113114837 -137573017 - AluJb SINE Alu -3 309 1 1761 188 0 7 chr2 113115130 113115438 -137572416 + AluJb SINE Alu 1 306 -6 327 164 68 0 chr2 113116781 113116854 -137571000 - Charlie5 DNA MER1_type -39 2573 2496 2355 130 65 73 chr2 113116860 113117354 -137570500 - L1MA10 LINE L1 -2 6332 5843 629 228 0 0 chr2 113117357 113117471 -137570383 + FLAM_A SINE Alu 1 114 -19 544 122 0 0 chr2 113117478 113117552 -137570302 - AluS SINE Alu -238 75 2 376 276 172 41 chr2 113117578 113117799 -137570055 - L1MC4a LINE L1 -1906 5902 5653 1549 145 28 46 chr2 113117958 113118241 -137569613 + AluJb SINE Alu 5 282 -30 1609 158 63 0 chr2 113118260 113118545 -137569309 + AluJb SINE Alu 1 303 -9 4541 171 64 44 chr2 113118815 113119339 -137568515 - L1MD2 LINE L1 -136 6292 5780 821 150 201 127 chr2 113119339 113119618 -137568236 - MER44D DNA MER2_type -1883 608 351 2167 112 0 3 chr2 113119618 113119931 -137567923 + AluSx SINE Alu 1 312 0 821 150 201 127 chr2 113119931 113119965 -137567889 - MER44D DNA MER2_type -2140 351 2 4541 171 64 44 chr2 113119965 113120178 -137567676 - L1MD2 LINE L1 -648 5780 5573 732 81 10 0 chr2 113120178 113120277 -137567577 - HY3 scRNA scRNA -1 100 1 4541 171 64 44 chr2 113120277 113120901 -137566953 - L1MD2 LINE L1 -855 5573 4912 1572 151 27 0 chr2 113120901 113121160 -137566694 + AluJo SINE Alu 1 266 -46 551 244 69 14 chr2 113121189 113121406 -137566448 - L1MD2 LINE L1 -4244 2152 1924 851 255 166 8 chr2 113121487 113121989 -137565865 - L1MD2 LINE L1 -5717 679 61 870 187 0 7 chr2 113121991 113122141 -137565713 - AluJo SINE Alu -163 149 1 2105 106 0 0 chr2 113122221 113122533 -137565321 + AluSg SINE Alu 1 312 0 2478 125 35 5 chr2 113122742 113123118 -137564736 - Tigger2a DNA MER2_type -47 387 1 1902 111 42 10 chr2 113123202 113123491 -137564363 - AluSx SINE Alu -14 298 1 1109 155 29 19 chr2 113123491 113123698 -137564156 + MER4D LTR ERV1 695 903 0 562 182 248 62 chr2 113123698 113123937 -137563917 - LTR48 LTR ERV1 -500 287 1 1907 145 10 0 chr2 113126310 113126613 -137561241 + AluJo SINE Alu 2 307 -5 613 308 135 19 chr2 113127104 113127520 -137560334 + L2 LINE L2 2420 2883 -431 488 189 57 25 chr2 113127577 113127699 -137560155 + MER106B DNA MER1_type 933 1058 -1 370 300 146 20 chr2 113127821 113128236 -137559618 + L2 LINE L2 2601 3060 -212 241 248 76 62 chr2 113128591 113128701 -137559153 + L2 LINE L2 2599 2713 -601 2274 87 0 7 chr2 113128701 113129001 -137558853 + AluSx SINE Alu 1 298 -14 241 248 76 62 chr2 113129001 113129035 -137558819 + L2 LINE L2 2713 2745 -569 188 219 0 0 chr2 113129325 113129357 -137558497 + L2 LINE L2 3224 3255 -17 25 0 0 0 chr2 113129982 113130007 -137557847 + AT_rich Low_complexity Low_complexity 1 25 0 2185 76 6 22 chr2 113130007 113130323 -137557531 - AluY SINE Alu 0 311 1 818 162 7 19 chr2 113130333 113130487 -137557367 - FRAM SINE Alu -25 151 1 2311 105 0 0 chr2 113130682 113130995 -137556859 - AluSq SINE Alu 0 313 1 1016 96 0 0 chr2 113130995 113131130 -137556724 - AluSq/x SINE Alu -177 135 1 1376 256 82 6 chr2 113131148 113131512 -137556342 - LTR16C LTR ERVL -2 489 98 2231 165 51 14 chr2 113132037 113132450 -137555404 - LTR3 LTR ERVK 0 432 5 479 236 60 18 chr2 113132645 113132862 -137554992 - MLT1H LTR MaLR -249 300 1 1186 183 92 20 chr2 113132895 113133199 -137554655 + MSTC LTR MaLR 66 428 0 547 281 94 14 chr2 113133201 113133438 -137554416 - L1M4 LINE L1 -2755 3391 3174 2063 96 0 0 chr2 113133438 113133709 -137554145 - AluSg SINE Alu -39 271 1 547 281 94 14 chr2 113133709 113133801 -137554053 - L1M4 LINE L1 -2972 3174 3030 2398 80 0 0 chr2 113133801 113134112 -137553742 - AluY SINE Alu 0 311 1 547 281 94 14 chr2 113134112 113134133 -137553721 - L1M4 LINE L1 -3116 3030 3012 465 225 104 45 chr2 113134384 113134606 -137553248 - L1M4 LINE L1 -3221 2925 2691 446 144 216 10 chr2 113134632 113134729 -137553125 - LTR16C LTR ERVL -1 490 374 198 319 181 35 chr2 113134901 113135133 -137552721 + L2 LINE L2 2127 2392 -922 1705 156 22 0 chr2 113135304 113135609 -137552245 - AluSx SINE Alu 0 311 1 1877 143 6 13 chr2 113135886 113136200 -137551654 - AluSx SINE Alu 0 312 1 2288 82 0 3 chr2 113136414 113136708 -137551146 - AluSc SINE Alu -16 293 1 1770 140 0 11 chr2 113136868 113137147 -137550707 + AluSx SINE Alu 1 276 -36 2057 110 0 3 chr2 113137464 113137784 -137550070 + AluSx SINE Alu 2 320 0 1306 144 54 0 chr2 113137784 113138006 -137549848 + AluSp SINE Alu 73 306 -7 729 259 32 33 chr2 113138115 113138444 -137549410 + MLT1I LTR MaLR 69 549 0 280 288 99 0 chr2 113138474 113138585 -137549269 + L1MC/D LINE L1 5382 5503 -2305 1818 163 36 0 chr2 113138599 113138900 -137548954 + AluSx SINE Alu 1 312 0 2255 87 19 7 chr2 113138909 113139218 -137548636 + AluSp SINE Alu 1 313 0 885 141 0 0 chr2 113139239 113139367 -137548487 + FLAM_C SINE Alu 1 128 -5 2262 91 0 0 chr2 113139616 113139913 -137547941 - AluSq SINE Alu -16 297 1 2285 81 0 0 chr2 113140301 113140597 -137547257 - AluSg SINE Alu -14 296 1 356 288 80 47 chr2 113141329 113141543 -137546311 + L1 LINE L1 3106 3326 -2820 1883 114 50 0 chr2 113141672 113141953 -137545901 - AluSg SINE Alu -15 295 1 407 232 24 8 chr2 113141989 113142040 -137545814 - L1MC4 LINE L1 -68 7974 7925 1410 174 49 30 chr2 113142040 113142345 -137545509 - AluJo SINE Alu -1 311 1 407 232 24 8 chr2 113142345 113142418 -137545436 - L1MC4 LINE L1 -117 7925 7848 869 348 73 37 chr2 113142482 113142830 -137545024 + ERVL LTR ERVL 1433 1767 -3997 2088 117 3 0 chr2 113142830 113143129 -137544725 + AluSx SINE Alu 1 300 -12 869 348 73 37 chr2 113143129 113143545 -137544309 + ERVL LTR ERVL 1767 2225 -3539 1243 317 52 5 chr2 113143578 113144023 -137543831 + ERVL LTR ERVL 2292 2757 -3007 915 309 45 18 chr2 113144252 113145026 -137542828 + ERVL LTR ERVL 3091 3918 -1736 1015 83 0 0 chr2 113145026 113145158 -137542696 - AluSq/x SINE Alu -180 132 1 338 268 56 6 chr2 113145346 113145529 -137542325 - L1MEc LINE L1 -4471 2069 1871 2043 171 79 8 chr2 113145531 113145899 -137541955 + MER68 LTR ERV1 1 394 -168 1159 254 136 3 chr2 113145900 113146239 -137541615 - HERV16 LTR ERVL -2922 2074 1691 1282 320 64 45 chr2 113146279 113146334 -137541520 - HERV16 LTR ERVL -3437 1559 1507 2076 105 0 14 chr2 113146334 113146629 -137541225 - AluSx SINE Alu -21 291 1 1282 320 64 45 chr2 113146629 113147320 -137540534 - HERV16 LTR ERVL -3489 1507 799 702 238 117 29 chr2 113147388 113147628 -137540226 - REP3 LTR ERV -23 539 279 463 167 24 0 chr2 113147649 113147733 -137540121 + MLT1E1 LTR MaLR 4 89 -565 271 221 0 13 chr2 113147788 113147865 -137539989 + CT-rich Low_complexity Low_complexity 3 78 0 824 172 6 0 chr2 113147866 113148040 -137539814 + C-rich Low_complexity Low_complexity 4 178 0 282 180 0 0 chr2 113148046 113148107 -137539747 + CT-rich Low_complexity Low_complexity 2 62 0 1294 124 135 77 chr2 113148109 113148383 -137539471 - AluSx SINE Alu -22 290 1 428 238 19 9 chr2 113148383 113148488 -137539366 - REP3 LTR ERV -256 306 201 2328 194 86 22 chr2 113148510 113149066 -137538788 + LTR8A LTR ERV1 1 592 -135 33849 98 14 47 chr2 113149078 113149751 -137538103 - L1PA7 LINE L1 0 6154 5460 201 39 0 0 chr2 113149751 113149777 -137538077 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2128 82 0 3 chr2 113149777 113150059 -137537795 - AluY SINE Alu -30 281 1 33849 98 14 47 chr2 113150059 113153386 -137534468 - L1PA7 LINE L1 -693 5461 2445 1986 113 30 0 chr2 113153386 113153687 -137534167 - AluSg SINE Alu 0 310 1 33849 98 14 47 chr2 113153687 113156055 -137531799 - L1PA7 LINE L1 -3709 2445 1 1145 135 6 0 chr2 113156055 113156218 -137531636 + LTR8 LTR ERV1 528 691 0 340 196 84 47 chr2 113156225 113156332 -137531522 - REP3 LTR ERV -433 129 19 1972 130 3 3 chr2 113156395 113156694 -137531160 - AluSx SINE Alu -7 305 7 1733 180 3 0 chr2 113156706 113157006 -137530848 - AluSx SINE Alu -11 301 1 1940 139 3 3 chr2 113157596 113157891 -137529963 - AluSx SINE Alu -15 297 3 186 43 0 0 chr2 113158383 113158406 -137529448 + (TG)n Simple_repeat Simple_repeat 2 24 0 1927 103 3 48 chr2 113158569 113158881 -137528973 + AluSc SINE Alu 1 298 -11 2341 79 3 0 chr2 113158882 113159185 -137528669 + AluSx SINE Alu 2 305 -7 1694 149 48 10 chr2 113159469 113159764 -137528090 - AluJb SINE Alu -6 306 1 671 150 1 1 chr2 113210300 113211507 -137476347 - CER Satellite Satellite 0 1207 1 1026 105 5 0 chr2 113211610 113212439 -137475415 - ACRO1 Satellite acromeric 0 832 1 556 214 0 0 chr2 113212771 113213027 -137474827 - ACRO1 Satellite acromeric 0 256 1 2043 130 0 10 chr2 113213494 113213793 -137474061 + AluY SINE Alu 1 296 -15 1695 174 14 14 chr2 113214282 113214569 -137473285 + AluJo SINE Alu 9 295 -17 2327 84 14 7 chr2 113214569 113214865 -137472989 + AluSx SINE Alu 1 298 -14 1683 131 3 96 chr2 113216329 113216641 -137471213 - AluSq SINE Alu -21 292 10 305 218 0 0 chr2 113218147 113218202 -137469652 - Tigger5 DNA MER2_type -2268 55 1 1765 118 66 0 chr2 113218591 113218878 -137468976 + L1PA10 LINE L1 5863 6168 0 913 263 42 29 chr2 113219051 113219363 -137468491 - MER21A LTR ERV1 -132 799 484 891 175 84 0 chr2 113219346 113219512 -137468342 - MER21B LTR ERV1 -485 378 199 * 216 0 0 0 chr2 113220257 113220281 -137467573 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 321 140 0 0 chr2 113220337 113220394 -137467460 + (CA)n Simple_repeat Simple_repeat 2 58 0 1408 78 0 11 chr2 113220569 113220749 -137467105 - AluY SINE Alu -133 178 1 2049 130 14 0 chr2 113220761 113221045 -137466809 - AluSx SINE Alu -24 288 1 2027 244 167 27 chr2 113221480 113222290 -137465564 + HAL1 LINE L1 30 952 -1555 1769 222 65 86 chr2 113222283 113222693 -137465161 + HAL1 LINE L1 1721 2107 -400 * 2366 71 7 7 chr2 113222693 113222989 -137464865 - AluY SINE Alu -15 296 1 1769 222 65 86 chr2 113222989 113223367 -137464487 + HAL1 LINE L1 2107 2492 -15 671 147 133 0 chr2 113224137 113224280 -137463574 - MER112 DNA MER1_type -65 195 34 572 210 0 0 chr2 113225179 113225435 -137462419 - ACRO1 Satellite acromeric 0 256 1 452 86 14 0 chr2 113225856 113225926 -137461928 + (TG)n Simple_repeat Simple_repeat 1 71 0 342 0 0 0 chr2 113225969 113226007 -137461847 + (CAGA)n Simple_repeat Simple_repeat 3 40 0 892 175 84 0 chr2 113226752 113226918 -137460936 + MER21B LTR ERV1 199 378 -485 909 244 68 11 chr2 113226947 113227213 -137460641 + MER21B LTR ERV1 450 730 -133 601 149 61 9 chr2 113227362 113227376 -137460478 - L1PA7 LINE L1 -6 6148 6136 186 103 0 0 chr2 113227376 113227405 -137460449 + (TTTCG)n Simple_repeat Simple_repeat 2 30 0 601 149 61 9 chr2 113227405 113227504 -137460350 - L1PA7 LINE L1 -18 6136 6029 1781 111 34 0 chr2 113227617 113227851 -137460003 - AluSq SINE Alu -71 242 1 1902 163 54 23 chr2 113227853 113228239 -137459615 - L1M2 LINE L1 -645 5667 5270 230 157 0 20 chr2 113228983 113229034 -137458820 + MIR3 SINE MIR 129 178 -30 22 35 0 0 chr2 113229717 113229746 -137458108 + AT_rich Low_complexity Low_complexity 1 29 0 1445 158 0 9 chr2 113229840 113230062 -137457792 + AluJo SINE Alu 71 290 -22 2166 106 41 0 chr2 113230928 113231220 -137456634 + AluSx SINE Alu 2 305 -7 235 208 0 0 chr2 113232359 113232407 -137455447 + L2 LINE L2 3224 3271 -1 2225 110 10 0 chr2 113232806 113233107 -137454747 - AluSq SINE Alu -9 304 1 1828 175 0 10 chr2 113233274 113233637 -137454217 - AluJo SINE Alu 0 360 1 438 314 0 8 chr2 113233648 113233772 -137454082 - L1ME LINE L1 -514 5607 5485 363 310 124 48 chr2 113234178 113234468 -137453386 - L3 LINE CR1 -46 1531 1220 3578 129 89 44 chr2 113234790 113234940 -137452914 - MER44D DNA MER2_type -1882 705 563 2276 79 24 0 chr2 113234940 113235231 -137452623 + AluSp SINE Alu 1 298 -15 3578 129 89 44 chr2 113235231 113235336 -137452518 - MER44D DNA MER2_type -2024 563 464 1820 164 0 20 chr2 113235336 113235634 -137452220 - AluJo SINE Alu -20 292 1 3578 129 89 44 chr2 113235634 113236052 -137451802 - MER44D DNA MER2_type -2123 464 1 5178 190 51 11 chr2 113236197 113237182 -137450672 + MSTB-int LTR MaLR 390 1413 -238 1450 105 10 0 chr2 113237185 113237394 -137450460 + MER41B LTR ERV1 2 212 -423 1998 139 33 38 chr2 113237394 113237760 -137450094 + THE1C LTR MaLR 1 364 -11 2511 112 18 85 chr2 113237763 113238220 -137449634 + MER41B LTR ERV1 210 635 0 1622 130 4 11 chr2 113238220 113238482 -137449372 + MSTB-int LTR MaLR 1392 1651 0 2299 180 54 5 chr2 113238482 113238888 -137448966 + MSTB LTR MaLR 1 426 0 333 200 150 36 chr2 113239166 113239306 -137448548 - L1ME4a LINE L1 -2 6119 5964 268 247 12 25 chr2 113239461 113239542 -137448312 + MLT1J2 LTR MaLR 71 150 -300 237 233 0 12 chr2 113239765 113239851 -137448003 - L1P LINE L1 -1089 5057 4973 1774 146 7 31 chr2 113239903 113240197 -137447657 - AluJo SINE Alu -25 287 1 283 246 92 62 chr2 113240888 113241018 -137446836 + L2 LINE L2 2722 2855 -459 963 187 0 0 chr2 113241130 113241307 -137446547 - FRAM SINE Alu 0 173 1 375 290 132 32 chr2 113242095 113242536 -137445318 + L2 LINE L2 2600 3080 -192 1859 190 71 0 chr2 113242585 113242922 -137444932 + MLT1A1 LTR MaLR 1 361 -4 201 162 0 0 chr2 113243067 113243104 -137444750 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 2388 93 10 6 chr2 113243471 113243782 -137444072 + AluSx SINE Alu 1 312 0 230 245 0 0 chr2 113243798 113243851 -137444003 - MIR SINE MIR -109 153 101 500 292 47 12 chr2 113244867 113245038 -137442816 - MIR3 SINE MIR -1 207 31 2040 156 0 33 chr2 113246061 113246421 -137441433 - L1MB7 LINE L1 -24 6160 5813 254 122 82 0 chr2 113246416 113246465 -137441389 - L1MC1 LINE L1 0 6333 6281 * 499 217 113 0 chr2 113246493 113246608 -137441246 - MER94 DNA DNA -1 133 6 216 217 22 0 chr2 113247065 113247111 -137440743 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 798 192 245 0 chr2 113247603 113247811 -137440043 + MIR SINE MIR 2 260 -2 21 36 0 0 chr2 113248210 113248238 -137439616 + AT_rich Low_complexity Low_complexity 1 28 0 315 78 22 11 chr2 113248496 113248549 -137439305 + Alu SINE Alu 1 44 -258 1099 209 137 28 chr2 113248650 113249038 -137438816 + L1MA8 LINE L1 5831 6260 -31 185 204 61 0 chr2 113250001 113250050 -137437804 - MIR SINE MIR -11 251 200 2265 128 0 0 chr2 113250071 113250376 -137437478 + AluSx SINE Alu 1 305 -7 1285 287 86 35 chr2 113250376 113250425 -137437429 + MLT1K LTR MaLR 14 59 -529 2147 138 0 0 chr2 113250425 113250716 -137437138 + AluSx SINE Alu 1 291 -21 1285 287 86 35 chr2 113250716 113251210 -137436644 + MLT1K LTR MaLR 59 585 -3 297 0 0 0 chr2 113251212 113251245 -137436609 + (CA)n Simple_repeat Simple_repeat 2 34 0 214 284 0 27 chr2 113251358 113251432 -137436422 - MIR SINE MIR -180 82 11 443 302 65 29 chr2 113251759 113252004 -137435850 - MLT1J LTR MaLR -151 360 107 2211 102 3 0 chr2 113252127 113252411 -137435443 - AluSp SINE Alu -27 286 2 945 200 55 0 chr2 113252414 113252634 -137435220 - MER33 DNA MER1_type -92 232 1 200 226 48 16 chr2 113252639 113252701 -137435153 - MIR SINE MIR -89 173 110 277 130 0 0 chr2 113253063 113253109 -137434745 - AluJo SINE Alu -2 300 255 1263 142 19 33 chr2 113253109 113253321 -137434533 - AluJo SINE Alu -103 209 1 1506 197 11 0 chr2 113254397 113254681 -137433173 - AluJb SINE Alu -25 287 1 234 254 0 32 chr2 113255548 113255611 -137432243 + AluYb8 SINE Alu 123 183 -125 493 181 0 32 chr2 113255630 113255724 -137432130 + FLAM_A SINE Alu 20 110 -32 297 0 0 0 chr2 113255731 113255764 -137432090 + (CA)n Simple_repeat Simple_repeat 2 34 0 1651 176 24 10 chr2 113255828 113256118 -137431736 + AluJo SINE Alu 1 294 -18 872 133 28 14 chr2 113256404 113256547 -137431307 + AluSq/x SINE Alu 1 145 -168 1758 114 0 39 chr2 113256547 113256801 -137431053 + AluSx SINE Alu 55 298 -14 2358 98 0 0 chr2 113257347 113257644 -137430210 - AluSc SINE Alu -12 297 1 247 282 46 22 chr2 113257879 113257988 -137429866 - LTR16A1 LTR ERVL -278 172 64 381 298 50 37 chr2 113258088 113258330 -137429524 - ERVL LTR ERVL -1032 4622 4378 560 259 48 0 chr2 113258333 113258499 -137429355 - ERVL LTR ERVL -3292 2472 2299 333 266 28 9 chr2 113259115 113259224 -137428630 - ERVL LTR ERVL -3607 2157 2047 208 329 90 13 chr2 113259274 113259479 -137428375 + MIR3 SINE MIR 9 228 -34 899 203 11 27 chr2 113259609 113259796 -137428058 - FRAM SINE Alu 0 176 1 2099 110 62 0 chr2 113259801 113260093 -137427761 - AluSg SINE Alu 0 310 1 2281 92 0 7 chr2 113260400 113260693 -137427161 - AluY SINE Alu -20 291 1 1090 171 0 0 chr2 113260696 113260860 -137426994 - AluJb SINE Alu -13 299 136 515 280 143 59 chr2 113261339 113262106 -137425748 + HAL1 LINE L1 838 1669 -838 1718 159 9 38 chr2 113262180 113262495 -137425359 + AluJo SINE Alu 1 306 -6 484 281 54 40 chr2 113262653 113263324 -137424530 + L1M4 LINE L1 2110 2945 -3201 862 177 266 0 chr2 113263329 113263566 -137424288 + LTR50 LTR ERVL 1 300 -495 321 261 130 31 chr2 113263677 113263838 -137424016 + LTR50 LTR ERVL 481 657 -138 643 278 160 3 chr2 113263966 113264254 -137423600 + LTR16C LTR ERVL 159 491 0 381 272 215 31 chr2 113264304 113264565 -137423289 + L1M4 LINE L1 2936 3244 -2902 21 0 0 0 chr2 113265331 113265352 -137422502 + AT_rich Low_complexity Low_complexity 1 21 0 261 336 153 0 chr2 113265582 113265713 -137422141 + MIR SINE MIR 91 241 -21 1168 171 25 5 chr2 113266111 113266310 -137421544 + MLT1A1 LTR MaLR 163 365 0 261 355 65 7 chr2 113266398 113266553 -137421301 + MIR SINE MIR 20 183 -79 265 254 15 30 chr2 113267430 113267497 -137420357 + Charlie8 DNA MER1_type 5 70 -2347 1312 103 0 5 chr2 113269784 113269969 -137417885 - AluSq SINE Alu -129 184 1 530 269 92 0 chr2 113270499 113270640 -137417214 + MER5B DNA MER1_type 7 160 -18 1510 143 22 0 chr2 113270640 113270870 -137416984 - MSTB LTR MaLR 0 426 192 867 154 0 0 chr2 113270873 113271009 -137416845 - FLAM_C SINE Alu -7 136 1 2172 116 3 0 chr2 113271015 113271325 -137416529 - AluSp SINE Alu -2 311 1 * 2330 99 0 0 chr2 113271325 113271628 -137416226 - AluSx SINE Alu -9 303 1 1101 168 26 0 chr2 113271629 113271820 -137416034 - MSTB LTR MaLR -230 196 1 195 0 0 0 chr2 113271820 113271843 -137416011 - MER5B DNA MER1_type -155 23 1 320 261 43 26 chr2 113272024 113272139 -137415715 + MLT1J LTR MaLR 1 117 -394 947 221 33 44 chr2 113272151 113272422 -137415432 + L1MC4 LINE L1 7092 7359 -683 565 194 276 35 chr2 113272433 113272647 -137415207 + LTR50 LTR ERVL 14 175 -620 2171 90 30 0 chr2 113272647 113272946 -137414908 - AluSx SINE Alu -4 308 1 565 194 276 35 chr2 113272946 113273133 -137414721 + LTR50 LTR ERVL 175 512 -283 304 122 112 102 chr2 113273189 113273287 -137414567 + LTR50 LTR ERVL 689 787 -8 676 210 138 31 chr2 113273430 113273625 -137414229 + MLT1J LTR MaLR 296 511 0 655 316 48 5 chr2 113273807 113274016 -137413838 - MIR SINE MIR -5 257 40 1655 187 0 3 chr2 113274089 113274388 -137413466 + AluJb SINE Alu 2 299 -13 2365 94 0 0 chr2 113275303 113275611 -137412243 + AluSg SINE Alu 1 308 -2 630 287 89 24 chr2 113276556 113276803 -137411051 + L2 LINE L2 2191 2453 -861 391 340 15 30 chr2 113276811 113276945 -137410909 + L2 LINE L2 2763 2895 -419 2125 126 7 0 chr2 113276945 113277255 -137410599 - AluSx SINE Alu 0 312 1 391 340 15 30 chr2 113277255 113277317 -137410537 + L2 LINE L2 2895 2956 -358 481 222 171 8 chr2 113277365 113277482 -137410372 + L2 LINE L2 3156 3291 -22 869 233 46 14 chr2 113277482 113277701 -137410153 - L1ME1 LINE L1 -23 6143 5918 309 316 101 43 chr2 113277968 113278107 -137409747 + L2 LINE L2 3167 3313 0 215 371 93 14 chr2 113278239 113278379 -137409475 + L2 LINE L2 2923 3073 -240 1151 68 7 0 chr2 113278721 113278867 -137408987 - AluSp SINE Alu -166 147 1 687 147 5 211 chr2 113281027 113281096 -137406758 - MER5A DNA MER1_type 0 189 107 1023 182 0 0 chr2 113281096 113281261 -137406593 + FAM SINE Alu 1 165 -10 687 147 5 211 chr2 113281261 113281409 -137406445 - MER5A DNA MER1_type -82 107 17 333 303 20 41 chr2 113281657 113281858 -137405996 + L2 LINE L2 3094 3310 -3 2057 94 0 75 chr2 113281998 113282329 -137405525 - AluSg SINE Alu -4 306 1 214 291 18 0 chr2 113283085 113283140 -137404714 - L2 LINE L2 -2 3270 3215 2082 132 0 0 chr2 113283154 113283458 -137404396 + AluSx SINE Alu 1 304 -8 197 260 20 0 chr2 113284269 113284319 -137403535 - MIR3 SINE MIR -49 159 109 675 37 0 0 chr2 113284790 113284872 -137402982 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 241 264 92 52 chr2 113285297 113285346 -137402508 + L1MC4a LINE L1 5892 5938 -1870 2323 72 7 0 chr2 113285346 113285650 -137402204 - AluY SINE Alu -5 306 1 241 264 92 52 chr2 113285650 113285774 -137402080 + L1MC4a LINE L1 5938 6072 -1736 788 142 7 21 chr2 113285790 113285931 -137401923 - FLAM_C SINE Alu -1 142 4 376 172 17 60 chr2 113285936 113286052 -137401802 + L1MC4a LINE L1 6111 6221 -1587 247 297 0 0 chr2 113286137 113286201 -137401653 - MIR SINE MIR -74 188 125 2006 129 0 3 chr2 113286462 113286764 -137401090 + AluSg SINE Alu 1 301 -9 1191 102 0 12 chr2 113287717 113287883 -137399971 + AluSq SINE Alu 83 246 -67 24 32 0 0 chr2 113288005 113288036 -137399818 + AT_rich Low_complexity Low_complexity 1 31 0 322 239 35 99 chr2 113288036 113288178 -137399676 - L1ME4a LINE L1 -13 6108 5976 2469 53 0 3 chr2 113288328 113288631 -137399223 + AluY SINE Alu 1 302 -9 410 259 139 73 chr2 113288676 113288993 -137398861 - LTR67 LTR ERVL 0 557 220 983 116 0 7 chr2 113289037 113289184 -137398670 - AluJb SINE Alu -80 232 87 460 268 63 63 chr2 113289187 113289392 -137398462 - LTR67 LTR ERVL -348 209 5 332 291 108 13 chr2 113289765 113289923 -137397931 - L1ME4a LINE L1 -1979 5829 5657 262 368 21 0 chr2 113291452 113291547 -137396307 + MIR SINE MIR 37 133 -129 1984 124 3 0 chr2 113291922 113292220 -137395634 - AluSx SINE Alu -13 299 1 231 36 0 0 chr2 113292642 113292670 -137395184 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 979 127 0 20 chr2 113292684 113292834 -137395020 - AluSg/x SINE Alu -28 282 136 1942 69 4 0 chr2 113292838 113293085 -137394769 - AluSx SINE Alu -11 301 54 337 139 115 0 chr2 113293208 113293276 -137394578 + L1M3 LINE L1 5485 5559 -572 646 218 20 14 chr2 113293280 113293427 -137394427 - FRAM SINE Alu -16 160 13 1188 192 4 26 chr2 113293431 113293665 -137394189 + L1M3 LINE L1 5542 5770 -413 316 266 38 0 chr2 113293766 113293845 -137394009 - L1ME4a LINE L1 -623 5543 5462 322 278 107 18 chr2 113293846 113294015 -137393839 - MIR SINE MIR -61 201 18 1873 123 65 0 chr2 113294228 113294521 -137393333 + AluSx SINE Alu 1 312 0 930 156 13 19 chr2 113294551 113294705 -137393149 - FRAM SINE Alu -13 153 1 1269 220 87 94 chr2 113294709 113295259 -137392595 + MLT1H1 LTR MaLR 1 546 -9 2091 115 3 0 chr2 113295632 113295936 -137391918 - AluSq SINE Alu -8 305 1 312 278 120 9 chr2 113295961 113296069 -137391785 - MIR SINE MIR -66 196 77 1928 100 50 0 chr2 113296600 113296905 -137390949 + AluSq SINE Alu 1 319 0 897 174 6 0 chr2 113296921 113297082 -137390772 + FRAM SINE Alu 6 167 -9 779 105 24 24 chr2 113297925 113298049 -137389805 - LTR15 LTR ERV1 -7 486 363 625 286 101 34 chr2 113298190 113298280 -137389574 + MLT1K LTR MaLR 208 291 -297 2364 52 0 0 chr2 113298280 113298570 -137389284 - AluY SINE Alu -21 290 1 625 286 101 34 chr2 113298570 113298835 -137389019 + MLT1K LTR MaLR 291 587 -1 387 250 12 38 chr2 113299532 113299692 -137388162 + L1ME LINE L1 4693 4848 -1298 1117 189 48 5 chr2 113299748 113299954 -137387900 + MER20 DNA MER1_type 5 219 0 410 284 102 59 chr2 113299963 113300266 -137387588 + L1ME LINE L1 4909 5224 -922 358 225 56 49 chr2 113300445 113300587 -137387267 + L1ME LINE L1 5456 5598 -523 407 161 99 0 chr2 113300807 113300888 -137386966 - Charlie5 DNA MER1_type -27 2585 2497 821 127 60 0 chr2 113300890 113301024 -137386830 + AluJo SINE Alu 1 142 -170 279 0 0 0 chr2 113301452 113301483 -137386371 + (TG)n Simple_repeat Simple_repeat 2 32 0 912 153 0 19 chr2 113301599 113301756 -137386098 - AluSg/x SINE Alu -7 303 150 2083 114 0 7 chr2 113301764 113302063 -137385791 - AluSp SINE Alu -15 298 2 28 0 0 0 chr2 113302070 113302098 -137385756 + AT_rich Low_complexity Low_complexity 1 28 0 312 238 0 0 chr2 113302588 113302651 -137385203 + L1MC4 LINE L1 6641 6703 -1339 1677 158 0 0 chr2 113303000 113303279 -137384575 + AluJb SINE Alu 1 279 -33 216 0 0 0 chr2 113303285 113303309 -137384545 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1941 152 0 0 chr2 113303324 113303634 -137384220 + AluSx SINE Alu 1 310 -2 593 275 161 14 chr2 113303661 113303872 -137383982 - MIR SINE MIR -6 256 15 218 169 65 91 chr2 113304004 113304019 -137383835 + MER5A DNA MER1_type 2 14 -175 293 226 274 0 chr2 113304019 113304103 -137383751 - MER5A DNA MER1_type -3 186 80 533 258 33 36 chr2 113306006 113306171 -137381683 + MIR SINE MIR 100 262 0 2161 94 3 0 chr2 113306175 113306461 -137381393 - AluSp SINE Alu -26 287 1 725 264 112 0 chr2 113307287 113307484 -137380370 - MIR SINE MIR -40 222 4 205 83 0 28 chr2 113308099 113308135 -137379719 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 343 250 158 43 chr2 113308857 113309021 -137378833 - MIR SINE MIR -37 225 43 21 71 0 0 chr2 113309695 113309737 -137378117 + GC_rich Low_complexity Low_complexity 1 42 0 1502 136 8 27 chr2 113310016 113310273 -137377581 - L1P4 LINE L1 -466 5700 5449 35 0 0 0 chr2 113310704 113310739 -137377115 + AT_rich Low_complexity Low_complexity 1 35 0 302 309 62 0 chr2 113313810 113313891 -137373963 + L2 LINE L2 3194 3279 -34 349 251 151 64 chr2 113315249 113315468 -137372386 + MER112 DNA MER1_type 1 238 -22 30 0 0 0 chr2 113315517 113315547 -137372307 + AT_rich Low_complexity Low_complexity 1 30 0 2192 99 0 16 chr2 113315733 113316045 -137371809 - AluSx SINE Alu -5 307 1 373 165 304 0 chr2 113318046 113318161 -137369693 + MER58C DNA MER1_type 66 215 0 23 0 0 0 chr2 113321038 113321061 -137366793 + AT_rich Low_complexity Low_complexity 1 23 0 2097 137 0 0 chr2 113321093 113321393 -137366461 - AluSx SINE Alu -12 300 1 2094 124 3 3 chr2 113321846 113322145 -137365709 + AluSg SINE Alu 1 299 -11 2159 105 29 16 chr2 113323647 113323953 -137363901 - AluSx SINE Alu -2 310 1 2120 142 91 18 chr2 113324049 113324444 -137363410 - Tigger2a DNA MER2_type -6 428 5 192 301 126 0 chr2 113324791 113324894 -137362960 - MIR SINE MIR -72 190 75 304 109 65 0 chr2 113325198 113325244 -137362610 - MER30B DNA MER1_type -136 54 6 2270 90 3 3 chr2 113325415 113325703 -137362151 - AluSq SINE Alu -18 295 8 445 234 212 0 chr2 113325762 113325899 -137361955 - HAL1 LINE L1 -34 2473 2308 701 179 172 13 chr2 113326036 113326187 -137361667 + MER20 DNA MER1_type 45 219 0 1438 217 35 6 chr2 113326327 113326641 -137361213 + Tigger6 DNA MER2_type 2 324 -1273 1531 123 4 87 chr2 113326787 113326951 -137360903 - AluSx SINE Alu -15 297 164 2291 117 0 7 chr2 113326951 113327260 -137360594 - AluSg SINE Alu -3 307 1 1531 123 4 87 chr2 113327260 113327371 -137360483 - AluSx SINE Alu -148 164 45 644 133 0 0 chr2 113327371 113327461 -137360393 - AluS SINE Alu -221 91 2 2047 90 0 8 chr2 113327538 113327805 -137360049 - AluSc SINE Alu -6 303 39 2083 131 10 3 chr2 113327805 113328111 -137359743 - AluSx SINE Alu -4 308 1 1048 249 55 0 chr2 113328223 113328480 -137359374 + Tigger6 DNA MER2_type 944 1214 -383 498 131 50 0 chr2 113328478 113328577 -137359277 + Tigger6 DNA MER2_type 1343 1446 -151 * 2288 100 3 0 chr2 113328577 113328877 -137358977 - AluSq SINE Alu -12 301 1 236 265 122 0 chr2 113328912 113329010 -137358844 - HAL1 LINE L1 -2130 377 268 279 208 115 0 chr2 113329012 113329108 -137358746 - HAL1 LINE L1 -2283 224 118 463 261 42 14 chr2 113329252 113329394 -137358460 + L2 LINE L2 3168 3313 0 1762 184 3 10 chr2 113330340 113330644 -137357210 - AluJb SINE Alu -10 302 1 284 316 0 5 chr2 113330695 113330816 -137357038 - MIR SINE MIR -81 127 9 21 0 0 0 chr2 113332393 113332414 -137355440 + GC_rich Low_complexity Low_complexity 1 21 0 3303 146 26 30 chr2 113332704 113333309 -137354545 - L1MB3 LINE L1 -4 6179 5577 262 337 190 0 chr2 113333920 113334125 -137353729 - L3 LINE CR1 -36 1541 1298 1738 164 0 45 chr2 113334232 113334542 -137353312 + AluJo SINE Alu 3 298 -14 1291 164 137 4 chr2 113334598 113334854 -137353000 - AluJb SINE Alu -10 292 3 370 175 62 0 chr2 113335090 113335170 -137352684 - L1MB8 LINE L1 -3 6175 6091 4272 146 40 11 chr2 113335170 113335333 -137352521 - L1MB8 LINE L1 -131 6047 5890 2476 173 43 7 chr2 113335333 113335778 -137352076 - LOR1b LTR ERV1 0 461 1 4272 146 40 11 chr2 113335778 113336336 -137351518 - L1MB8 LINE L1 -288 5890 5302 1411 134 5 27 chr2 113336337 113336560 -137351294 - AluSg/x SINE Alu -14 298 81 296 314 0 51 chr2 113336787 113336905 -137350949 - L3 LINE CR1 -1039 538 427 775 174 0 0 chr2 113336906 113337027 -137350827 + FLAM_C SINE Alu 2 122 -21 318 284 125 17 chr2 113337309 113337485 -137350369 - MIR SINE MIR -39 223 29 824 167 0 0 chr2 113337654 113337786 -137350068 + FLAM_C SINE Alu 1 132 -1 371 362 36 5 chr2 113337923 113338144 -137349710 - L3 LINE CR1 -1186 391 164 343 311 57 0 chr2 113338663 113338785 -137349069 + MER5B DNA MER1_type 1 129 -49 24 32 0 0 chr2 113339170 113339201 -137348653 + AT_rich Low_complexity Low_complexity 1 31 0 31 26 0 0 chr2 113339761 113339799 -137348055 + AT_rich Low_complexity Low_complexity 1 38 0 681 265 160 23 chr2 113339940 113340457 -137347397 - MLT1L LTR MaLR 0 615 1 22 35 0 0 chr2 113340863 113340892 -137346962 + AT_rich Low_complexity Low_complexity 1 29 0 1881 141 3 43 chr2 113340892 113341196 -137346658 - AluJb SINE Alu -20 292 1 50 42 0 0 chr2 113341961 113342032 -137345822 + AT_rich Low_complexity Low_complexity 1 71 0 181 241 64 18 chr2 113342101 113342182 -137345672 - MIR SINE MIR -6 202 110 335 314 192 13 chr2 113342650 113342879 -137344975 + L2 LINE L2 2511 2780 -534 280 259 119 63 chr2 113343518 113343661 -137344193 + L2 LINE L2 3122 3272 0 386 39 19 0 chr2 113344548 113344600 -137343254 + (TG)n Simple_repeat Simple_repeat 2 54 0 180 270 63 16 chr2 113345508 113345571 -137342283 + MIR SINE MIR 82 147 -61 469 277 98 15 chr2 113346428 113346816 -137341038 + L1ME4a LINE L1 5572 6102 -19 296 287 26 9 chr2 113346912 113347027 -137340827 + MIR3 SINE MIR 40 156 -52 2099 71 63 0 chr2 113347120 113347424 -137340430 + AluY SINE Alu 1 321 0 313 253 0 61 chr2 113347424 113347514 -137340340 - MIR SINE MIR -6 256 170 309 98 0 0 chr2 113347520 113347561 -137340293 + tRNA-Lys-AAG tRNA tRNA 1 41 -35 413 255 0 0 chr2 113347561 113347667 -137340187 - MIR SINE MIR -82 180 75 238 222 19 19 chr2 113348519 113348573 -137339281 + MARNA DNA Mariner 140 193 -393 675 198 0 8 chr2 113352016 113352142 -137335712 + FLAM_A SINE Alu 5 129 -4 341 273 154 16 chr2 113353474 113353673 -137334181 - MIR SINE MIR -22 240 19 476 309 30 6 chr2 113354293 113354461 -137333393 - MIR SINE MIR -44 218 47 322 314 54 49 chr2 113354584 113354769 -137333085 - MIR3 SINE MIR -18 190 5 2249 99 10 3 chr2 113354842 113355136 -137332718 + AluSq SINE Alu 1 296 -17 212 278 67 61 chr2 113355422 113355602 -137332252 - L2 LINE L2 -443 2871 2691 2546 147 49 2 chr2 113355974 113356381 -137331473 + MSTB LTR MaLR 1 426 0 2485 78 7 0 chr2 113356381 113356690 -137331164 + AluY SINE Alu 1 311 0 2364 152 2 18 chr2 113356702 113357096 -137330758 + MSTB-int LTR MaLR 1 388 -1263 205 364 7 7 chr2 113357212 113357363 -137330491 + (TG)n Simple_repeat Simple_repeat 2 152 0 188 330 76 17 chr2 113358132 113358250 -137329604 - L2 LINE L2 -11 3261 3137 283 154 51 77 chr2 113359365 113359419 -137328435 - MER46C DNA MER2_type 0 338 284 2268 95 0 7 chr2 113359419 113359728 -137328126 - AluSq SINE Alu 0 307 1 283 154 51 77 chr2 113359728 113359750 -137328104 - MER46C DNA MER2_type -54 284 263 656 176 42 8 chr2 113359752 113359871 -137327983 - FLAM_A SINE Alu -10 123 1 587 209 38 51 chr2 113359930 113360088 -137327766 - MER46C DNA MER2_type -105 233 78 1982 149 3 0 chr2 113360647 113360948 -137326906 + AluSx SINE Alu 1 302 -10 597 245 70 17 chr2 113360958 113361186 -137326668 + L1ME3 LINE L1 5668 5913 -257 2321 92 0 3 chr2 113361927 113362221 -137325633 - AluSx SINE Alu -19 293 1 710 203 128 134 chr2 113362561 113363053 -137324801 - L1ME4a LINE L1 -3 6118 5630 1987 133 4 0 chr2 113363194 113363472 -137324382 - AluSq SINE Alu -12 301 23 566 280 65 39 chr2 113363609 113363841 -137324013 - MLT1I LTR MaLR -18 391 154 198 0 0 0 chr2 113364322 113364344 -137323510 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2166 120 0 0 chr2 113364347 113364630 -137323224 - AluSx SINE Alu -29 283 1 535 243 74 0 chr2 113365997 113366145 -137321709 + MER103 DNA DNA 6 164 -2 342 295 29 0 chr2 113366569 113366674 -137321180 + L2 LINE L2 3200 3307 -6 1987 133 0 37 chr2 113366790 113367113 -137320741 + AluSq SINE Alu 1 311 -2 2262 119 0 0 chr2 113367137 113367439 -137320415 + AluSx SINE Alu 1 302 -10 454 224 0 0 chr2 113367497 113367604 -137320250 + L1MC1 LINE L1 5176 5282 -864 1338 189 114 4 chr2 113367604 113367858 -137319996 + AluJo SINE Alu 1 282 -30 331 210 0 0 chr2 113367869 113367931 -137319923 + L1MC1 LINE L1 5268 5329 -1015 1314 179 0 41 chr2 113368032 113368278 -137319576 + AluJo SINE Alu 65 300 -12 5681 145 20 26 chr2 113368278 113368676 -137319178 + L1MC1 LINE L1 5312 5711 -622 1853 183 0 0 chr2 113368676 113368971 -137318883 + AluJo SINE Alu 1 295 -17 5681 145 20 26 chr2 113368971 113369595 -137318259 + L1MC1 LINE L1 5711 6327 -6 251 111 0 0 chr2 113369620 113369656 -137318198 + Alu SINE Alu 5 40 -262 * 268 224 0 0 chr2 113369645 113369694 -137318160 + MER45 DNA AcHobo 1531 1579 -2 2081 172 81 41 chr2 113369749 113369941 -137317913 + MER66A LTR ERV1 27 210 -268 2001 106 64 3 chr2 113369941 113370223 -137317631 + AluSx SINE Alu 1 299 -13 2081 172 81 41 chr2 113370223 113370465 -137317389 + MER66A LTR ERV1 210 478 0 1914 249 75 6 chr2 113370466 113371074 -137316780 + L1MD3 LINE L1 7161 7982 0 1401 241 100 51 chr2 113371191 113371512 -137316342 + L1MC4a LINE L1 5256 5560 -2248 1635 189 37 17 chr2 113371512 113371808 -137316046 + AluJo SINE Alu 1 302 -10 1401 241 100 51 chr2 113371808 113372016 -137315838 + L1MC4a LINE L1 5560 5825 -1983 1478 213 22 11 chr2 113372016 113372373 -137315481 + L1MA10 LINE L1 5974 6334 0 1401 241 100 51 chr2 113372373 113372493 -137315361 + L1MC4a LINE L1 5825 5938 -1870 4892 129 21 25 chr2 113372501 113373374 -137314480 + L1PA16 LINE L1 5289 6157 -9 405 289 140 13 chr2 113373377 113373605 -137314249 + L1MC4a LINE L1 5918 6174 -1634 2178 109 0 3 chr2 113373860 113374154 -137313700 - AluSx SINE Alu -19 293 1 200 83 0 28 chr2 113374205 113374241 -137313613 + (GGGA)n Simple_repeat Simple_repeat 4 38 0 732 292 68 32 chr2 113374271 113374651 -137313203 + L1MC4a LINE L1 5536 5929 -1879 1428 128 38 42 chr2 113374796 113374847 -137313007 - L1MB3 LINE L1 -2 6181 6131 2513 66 3 0 chr2 113374847 113375148 -137312706 - AluY SINE Alu -9 302 1 1428 128 38 42 chr2 113375148 113375384 -137312470 - L1MB3 LINE L1 -52 6131 5895 7264 17 1 0 chr2 113375484 113376372 -137311482 - L1PA4 LINE L1 -39 6116 5228 271 270 7 101 chr2 113376401 113376549 -137311305 - L1MC4 LINE L1 -5 8037 7904 334 37 74 0 chr2 113376551 113376605 -137311249 + (TATG)n Simple_repeat Simple_repeat 4 61 0 915 307 17 9 chr2 113376622 113376971 -137310883 - L1MC4 LINE L1 -124 7918 7567 531 300 33 11 chr2 113377009 113377189 -137310665 + MIR SINE MIR 2 185 -77 266 215 13 0 chr2 113377976 113378055 -137309799 + (TCCA)n Simple_repeat Simple_repeat 2 81 0 921 169 7 0 chr2 113378109 113378263 -137309591 - Tigger3(Golem) DNA MER2_type 0 3029 2875 696 219 65 0 chr2 113378263 113378418 -137309436 - Tigger3(Golem) DNA MER2_type -2864 165 1 2233 123 0 0 chr2 113378580 113378882 -137308972 - AluSg SINE Alu -8 302 1 245 71 71 0 chr2 113378882 113378924 -137308930 + CT-rich Low_complexity Low_complexity 2 46 0 294 95 0 0 chr2 113378924 113378966 -137308888 + (TCCC)n Simple_repeat Simple_repeat 2 43 0 1488 136 34 89 chr2 113378966 113379462 -137308392 - AluSg SINE Alu 0 310 1 212 333 0 0 chr2 113380671 113380749 -137307105 + (CA)n Simple_repeat Simple_repeat 1 78 0 327 49 0 0 chr2 113382453 113382494 -137305360 + (CA)n Simple_repeat Simple_repeat 2 42 0 393 254 16 25 chr2 113384794 113384916 -137302938 - MIR SINE MIR -71 137 17 345 216 0 68 chr2 113386371 113386459 -137301395 - MIR SINE MIR -72 190 109 214 333 44 0 chr2 113387285 113387375 -137300479 - L3b LINE CR1 -200 1383 1290 601 281 100 14 chr2 113387759 113387969 -137299885 - MIR SINE MIR -12 250 23 1010 219 63 19 chr2 113488027 113488297 -137199557 - L1ME1 LINE L1 -144 6022 5741 890 284 85 15 chr2 113488299 113488757 -137199097 - L1MEc LINE L1 -4582 1814 1325 675 256 6 12 chr2 113488765 113488929 -137198925 - MER41E LTR ERV1 -3 509 347 3260 83 9 5 chr2 113488938 113489383 -137198471 - L1PA10 LINE L1 -10 6158 5712 3150 99 11 7 chr2 113489383 113489836 -137198018 + L1PA10 LINE L1 5268 5722 -446 290 308 9 28 chr2 113489859 113489966 -137197888 - MER41E LTR ERV1 -171 341 237 1993 192 71 85 chr2 113490282 113490609 -137197245 - L1MEc LINE L1 -5223 1173 843 2174 120 0 3 chr2 113490609 113490900 -137196954 - AluSq SINE Alu -23 290 1 1993 192 71 85 chr2 113490900 113491266 -137196588 - L1MEc LINE L1 -5553 843 490 * 2604 255 52 52 chr2 113491246 113492217 -137195637 - L1MEc LINE L1 -5390 1006 36 206 97 0 0 chr2 113492262 113492293 -137195561 + MIR SINE MIR 6 36 -226 248 350 14 21 chr2 113492332 113492472 -137195382 + MIR SINE MIR 124 262 0 208 338 88 29 chr2 113492843 113492979 -137194875 + MER5B DNA MER1_type 3 146 -32 908 177 38 21 chr2 113493173 113493359 -137194495 - MER5A DNA MER1_type 0 189 1 3505 289 107 23 chr2 113494139 113495923 -137191931 + L2 LINE L2 50 1983 -1331 255 304 94 27 chr2 113496029 113496166 -137191688 + L2 LINE L2 1968 2127 -1187 973 182 96 5 chr2 113496166 113496364 -137191490 + MER20 DNA MER1_type 4 219 0 255 304 94 27 chr2 113496364 113496450 -137191404 + L2 LINE L2 2127 2206 -1108 658 228 18 12 chr2 113496681 113496848 -137191006 - MER83C LTR ERV1 0 373 206 933 269 45 48 chr2 113497186 113497584 -137190270 + L2 LINE L2 2907 3303 -10 185 247 0 123 chr2 113498205 113498286 -137189568 - MIR SINE MIR -136 126 56 194 143 20 0 chr2 113499092 113499141 -137188713 + (CTG)n Simple_repeat Simple_repeat 2 51 0 192 40 0 0 chr2 113499605 113499630 -137188224 + (TG)n Simple_repeat Simple_repeat 2 26 0 381 286 56 24 chr2 113499669 113499903 -137187951 + MLT1H LTR MaLR 40 282 -127 276 372 70 0 chr2 113500216 113500372 -137187482 - MIR3 SINE MIR -6 202 36 333 175 168 10 chr2 113500596 113500733 -137187121 - MER5A DNA MER1_type 0 189 1 2244 95 3 44 chr2 113501556 113501872 -137185982 + AluSx SINE Alu 1 303 -9 1099 304 81 42 chr2 113502001 113502932 -137184922 + L1M4 LINE L1 3543 4509 -1637 3278 205 62 20 chr2 113503354 113504211 -137183643 - L1MC4a LINE L1 -2 7806 6914 2671 30 0 0 chr2 113504900 113505197 -137182657 + AluY SINE Alu 5 301 -10 23 0 0 0 chr2 113505441 113505464 -137182390 + AT_rich Low_complexity Low_complexity 1 23 0 432 287 8 0 chr2 113506738 113506867 -137180987 - MER5B DNA MER1_type -40 138 9 1555 333 67 32 chr2 113506977 113507457 -137180397 + ERVL LTR ERVL 1377 1839 -3925 1699 162 85 14 chr2 113507457 113507821 -137180033 + MLT1B LTR MaLR 1 390 0 1555 333 67 32 chr2 113507821 113508394 -137179460 + ERVL LTR ERVL 1839 2467 -3297 1260 213 11 15 chr2 113508417 113508680 -137179174 - L1PB4 LINE L1 -3 6153 5892 843 271 21 64 chr2 113508688 113509065 -137178789 + ERVL LTR ERVL 5017 5336 -318 610 213 63 75 chr2 113509279 113509453 -137178401 + LTR33 LTR ERVL 1 172 -349 588 95 191 19 chr2 113509906 113510011 -137177843 + Tigger3(Golem) DNA MER2_type 2841 2963 -66 767 297 74 16 chr2 113510041 113510351 -137177503 + LTR33 LTR ERVL 194 521 0 535 296 55 19 chr2 113510722 113511226 -137176628 - L1ME LINE L1 -546 5624 5098 335 290 46 0 chr2 113513174 113513305 -137174549 + LTR33A LTR ERVL 364 500 -23 521 302 45 21 chr2 113516116 113516358 -137171496 + L3 LINE CR1 1220 1467 -110 234 0 0 0 chr2 113516440 113516466 -137171388 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 231 167 0 0 chr2 113518512 113518554 -137169300 + (CAATT)n Simple_repeat Simple_repeat 4 45 0 279 257 29 19 chr2 113518585 113518690 -137169164 - L2 LINE L2 -46 3267 3162 678 246 169 23 chr2 113518855 113519245 -137168609 - L2 LINE L2 -359 2955 2509 1202 246 174 8 chr2 113519335 113519864 -137167990 - L2 LINE L2 -1367 1947 1331 1008 308 80 48 chr2 113519992 113520731 -137167123 - L2 LINE L2 -167 3146 2383 2054 141 0 3 chr2 113521578 113521875 -137165979 - AluSx SINE Alu -16 296 1 586 332 28 5 chr2 113522026 113522240 -137165614 + MIR SINE MIR 34 252 -10 1636 230 86 6 chr2 113523260 113523726 -137164128 - MLT1F LTR MaLR 0 542 52 2762 124 0 0 chr2 113523726 113524090 -137163764 - THE1B LTR MaLR 0 364 1 10763 102 8 27 chr2 113524090 113525645 -137162209 - THE1B-int LTR MaLR 0 1580 56 1818 206 102 2 chr2 113525696 113526118 -137161736 - MLT1F LTR MaLR 0 542 49 2801 117 0 8 chr2 113526118 113526485 -137161369 - THE1B LTR MaLR 0 364 1 1818 206 102 2 chr2 113526485 113526540 -137161314 - MLT1F LTR MaLR -493 49 1 958 256 36 56 chr2 113526576 113527025 -137160829 - LTR37B LTR ERV1 0 468 29 1351 151 5 18 chr2 113527029 113527248 -137160606 - AluSg/x SINE Alu -16 296 81 562 65 0 0 chr2 113527487 113527564 -137160290 + L1PA3 LINE L1 6079 6155 0 555 289 103 31 chr2 113527823 113528242 -137159612 + L1ME4a LINE L1 5649 6097 -24 543 211 0 27 chr2 113528340 113528525 -137159329 + GA-rich Low_complexity Low_complexity 1 180 0 351 312 14 7 chr2 113529681 113529819 -137158035 - MER103 DNA DNA 0 166 28 321 293 43 12 chr2 113530056 113530220 -137157634 - MIR3 SINE MIR -28 180 12 256 241 0 0 chr2 113531166 113531220 -137156634 + MER4-int LTR ERV1 1111 1164 -5434 311 216 0 10 chr2 113531230 113531327 -137156527 + (TATG)n Simple_repeat Simple_repeat 4 99 0 512 230 123 28 chr2 113532974 113533226 -137154628 + L1ME4a LINE L1 5846 6121 0 1864 211 61 16 chr2 113533517 113533957 -137153897 + MLT1C LTR MaLR 8 467 0 841 165 46 107 chr2 113533965 113534248 -137153606 + MLT1F1 LTR MaLR 30 304 -263 505 128 0 23 chr2 113534266 113534352 -137153502 + MLT1F1 LTR MaLR 482 565 -2 371 307 130 59 chr2 113534825 113535164 -137152690 + L2 LINE L2 2893 3255 -17 186 385 82 0 chr2 113535168 113535303 -137152551 + L2 LINE L2 2937 3082 -190 772 319 51 22 chr2 113535632 113535919 -137151935 + L3 LINE CR1 1244 1542 -35 1972 132 7 0 chr2 113535919 113536200 -137151654 - AluSx SINE Alu -29 283 1 772 319 51 22 chr2 113536200 113536226 -137151628 + L3 LINE CR1 1542 1566 -11 934 126 6 22 chr2 113536717 113536899 -137150955 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 241 307 40 0 chr2 113538202 113538277 -137149577 - MIR SINE MIR -115 93 16 248 309 11 103 chr2 113538489 113538664 -137149190 - MIR3 SINE MIR 0 208 50 434 152 189 45 chr2 113540303 113540435 -137147419 + MER5A DNA MER1_type 9 159 -30 236 297 79 20 chr2 113540511 113540612 -137147242 + MER5B DNA MER1_type 72 178 0 2679 137 43 17 chr2 113542196 113542613 -137145241 + MSTA LTR MaLR 1 428 0 29 28 0 0 chr2 113542874 113542910 -137144944 + AT_rich Low_complexity Low_complexity 1 36 0 9275 212 51 59 chr2 113542926 113545057 -137142797 - L1MA8 LINE L1 -2 7708 5561 3293 71 57 0 chr2 113545057 113545480 -137142374 + L1PA8 LINE L1 5721 6167 -5 9275 212 51 59 chr2 113545480 113549269 -137138585 - L1MA8 LINE L1 -2149 5561 1885 1592 252 50 30 chr2 113549274 113549859 -137137995 - L1MA8 LINE L1 -6627 862 10 21 0 0 0 chr2 113550033 113550054 -137137800 + AT_rich Low_complexity Low_complexity 1 21 0 189 256 0 0 chr2 113551145 113551184 -137136670 - MER5A DNA MER1_type -2 187 149 218 389 9 9 chr2 113551240 113551348 -137136506 - MER5B DNA MER1_type -69 109 2 481 192 91 19 chr2 113551509 113551671 -137136183 + L1ME LINE L1 5660 5823 -342 1451 174 61 44 chr2 113552578 113552751 -137135103 - AluJb SINE Alu -13 299 117 189 0 0 0 chr2 113552751 113552772 -137135082 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 1451 174 61 44 chr2 113552772 113552892 -137134962 - AluJb SINE Alu -195 117 1 1821 202 67 15 chr2 113552896 113553287 -137134567 - L1PA12 LINE L1 -7170 411 1 977 257 61 20 chr2 113553289 113553451 -137134403 + HAL1 LINE L1 2039 2193 -314 306 0 0 0 chr2 113553451 113553485 -137134369 + (TG)n Simple_repeat Simple_repeat 2 35 0 977 257 61 20 chr2 113553485 113553668 -137134186 + HAL1 LINE L1 2193 2398 -109 21 0 0 0 chr2 113554271 113554292 -137133562 + AT_rich Low_complexity Low_complexity 1 21 0 287 152 174 22 chr2 113554775 113554867 -137132987 - L1ME3 LINE L1 -214 5956 5851 987 228 67 111 chr2 113554904 113555028 -137132826 - LTR16B LTR ERVL -45 419 291 2120 116 7 16 chr2 113555028 113555331 -137132523 + AluSx SINE Alu 1 300 -12 987 228 67 111 chr2 113555331 113555640 -137132214 - LTR16B LTR ERVL -173 291 5 304 248 36 104 chr2 113555809 113556072 -137131782 - MERVL LTR ERVL -203 5282 4576 668 297 47 39 chr2 113556087 113556191 -137131663 - MERVL LTR ERVL -995 4659 4557 767 259 66 5 chr2 113556191 113556388 -137131466 - MER63A DNA MER1_type 0 210 2 668 297 47 39 chr2 113556388 113556647 -137131207 - MERVL LTR ERVL -1097 4557 4293 686 287 64 48 chr2 113556653 113557446 -137130408 - L1MEc LINE L1 -4706 1829 849 392 313 20 0 chr2 113557942 113558041 -137129813 - MER5A DNA MER1_type -80 109 9 188 355 108 5 chr2 113559150 113559336 -137128518 - MIR SINE MIR -51 211 7 243 236 181 0 chr2 113559337 113559409 -137128445 - LTR16C LTR ERVL 0 491 407 300 167 0 0 chr2 113559736 113559784 -137128070 - MLT2C1 LTR ERVL 0 397 350 849 124 0 0 chr2 113559932 113560045 -137127809 - AluSq/x SINE Alu -193 119 7 3650 100 11 4 chr2 113560046 113560567 -137127287 - HSMAR2 DNA Mariner -777 525 1 2483 215 41 4 chr2 113560571 113561060 -137126794 - MLT2B3 LTR ERVL -46 508 2 222 325 128 35 chr2 113562453 113562656 -137125198 + L3 LINE CR1 1214 1435 -142 27 29 0 0 chr2 113563102 113563136 -137124718 + AT_rich Low_complexity Low_complexity 1 34 0 1140 175 18 23 chr2 113563433 113563650 -137124204 + MER20 DNA MER1_type 1 216 -3 1944 18 5 5 chr2 113564540 113564761 -137123093 - AluY SINE Alu -9 302 82 3633 48 0 0 chr2 113565005 113565423 -137122431 - L1PA4 LINE L1 -3 6152 5735 1328 47 0 12 chr2 113565544 113565713 -137122141 + L1P1 LINE L1 5612 5778 -377 2578 151 21 26 chr2 113566994 113567463 -137120391 - L1MB1 LINE L1 -20 6148 5682 2323 150 83 9 chr2 113567456 113567758 -137120096 + L1M3 LINE L1 4991 5269 -899 * 378 0 0 0 chr2 113567758 113567800 -137120054 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 2323 150 83 9 chr2 113567800 113568168 -137119686 + L1M3 LINE L1 5269 5696 -472 335 241 38 6 chr2 113568448 113568606 -137119248 + (TA)n Simple_repeat Simple_repeat 2 164 0 2006 259 68 28 chr2 113568933 113569399 -137118455 + HsTC2a DNA Tc2 29 533 -1367 2138 134 0 3 chr2 113569399 113569706 -137118148 + AluSx SINE Alu 1 306 -6 2006 259 68 28 chr2 113569706 113569926 -137117928 + HsTC2a DNA Tc2 533 743 -1 363 269 27 63 chr2 113569938 113570161 -137117693 - L1M4 LINE L1 -3822 2324 2110 21 0 0 0 chr2 113570589 113570610 -137117244 + AT_rich Low_complexity Low_complexity 1 21 0 2365 75 7 0 chr2 113570736 113571031 -137116823 - AluY SINE Alu -14 297 1 195 343 20 20 chr2 113571605 113571707 -137116147 - MIR SINE MIR -112 150 49 2916 195 69 3 chr2 113572504 113573130 -137114724 + LTR65 LTR ERV1 3 669 0 662 191 9 0 chr2 113573634 113573749 -137114105 + FLAM_C SINE Alu 2 117 -26 267 31 0 0 chr2 113573750 113573782 -137114072 + (GGAGAA)n Simple_repeat Simple_repeat 1 32 0 1009 123 12 0 chr2 113573874 113574044 -137113810 + (GAA)n Simple_repeat Simple_repeat 1 172 0 223 89 0 44 chr2 113574046 113574091 -137113763 + (GGA)n Simple_repeat Simple_repeat 1 43 0 265 279 117 18 chr2 113574631 113574742 -137113112 - L2 LINE L2 -8 3264 3143 739 309 110 43 chr2 113574938 113575609 -137112245 - L2 LINE L2 -362 2952 2237 392 136 200 14 chr2 113575624 113575764 -137112090 + THE1C LTR MaLR 12 177 -198 1817 102 8 0 chr2 113575943 113576187 -137111667 + THE1B LTR MaLR 118 363 -1 368 304 88 32 chr2 113576204 113576546 -137111308 - L2 LINE L2 -1112 2202 1842 1684 173 65 25 chr2 113576616 113576940 -137110914 - MER1B DNA MER1_type 0 337 1 23 54 0 0 chr2 113576953 113576990 -137110864 + AT_rich Low_complexity Low_complexity 1 37 0 368 269 41 97 chr2 113577280 113577536 -137110318 + L1MC4a LINE L1 5641 5879 -299 2282 110 0 10 chr2 113577536 113577836 -137110018 + AluSx SINE Alu 1 297 -15 368 269 41 97 chr2 113577836 113577911 -137109943 + L1MC4a LINE L1 5879 5957 -221 292 268 0 0 chr2 113578805 113578876 -137108978 - Charlie8 DNA MER1_type -2212 205 135 365 233 117 19 chr2 113579658 113579761 -137108093 + L2 LINE L2 3195 3307 -6 693 290 50 37 chr2 113582314 113582611 -137105243 - LTR16C LTR ERVL 0 491 191 853 251 85 40 chr2 113583029 113583390 -137104464 + Charlie7 DNA MER1_type 278 655 -1957 2536 127 71 5 chr2 113583390 113583814 -137104040 - Tigger2 DNA MER2_type 0 2718 2267 455 130 0 0 chr2 113583798 113583867 -137103987 - Tigger2 DNA MER2_type -2649 69 1 * 414 322 23 12 chr2 113585662 113585833 -137102021 + MLT1J LTR MaLR 1 173 -338 419 330 197 30 chr2 113585890 113586430 -137101424 - L2 LINE L2 -706 2608 2160 2239 110 0 3 chr2 113586430 113586722 -137101132 + AluSg SINE Alu 1 291 -19 419 330 197 30 chr2 113586722 113587192 -137100662 - L2 LINE L2 -1154 2160 1429 414 39 0 0 chr2 113588596 113588648 -137099206 + (TG)n Simple_repeat Simple_repeat 2 53 0 299 272 110 70 chr2 113589633 113589712 -137098142 - MIR SINE MIR -16 246 172 1898 128 3 40 chr2 113589712 113590016 -137097838 - AluSq SINE Alu -20 293 1 299 272 110 70 chr2 113590016 113590164 -137097690 - MIR SINE MIR -90 172 10 187 262 115 0 chr2 113590180 113590241 -137097613 + L3 LINE CR1 1025 1092 -485 520 316 115 21 chr2 113590425 113590930 -137096924 + L2 LINE L2 2587 3136 -177 189 107 0 0 chr2 113590952 113590980 -137096874 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 191 343 22 37 chr2 113590981 113591115 -137096739 + L2 LINE L2 3182 3313 0 1892 122 51 14 chr2 113592426 113592722 -137095132 - AluSx SINE Alu -5 307 1 2356 101 3 0 chr2 113593845 113594142 -137093712 + AluSp SINE Alu 1 298 -15 307 295 138 59 chr2 113596282 113596536 -137091318 + L1MEc LINE L1 161 434 -5771 1818 274 102 79 chr2 113596613 113597469 -137090385 + L1M4 LINE L1 3860 4764 -1382 1771 179 3 6 chr2 113597469 113597781 -137090073 + AluJb SINE Alu 1 311 -1 1818 274 102 79 chr2 113597781 113598346 -137089508 + L1M4 LINE L1 4764 5314 -832 943 114 0 8 chr2 113598346 113598477 -137089377 - FAM SINE Alu -20 165 36 1801 236 43 42 chr2 113598919 113600157 -137087697 - L1ME1 LINE L1 -5 6230 4952 2066 127 27 0 chr2 113600157 113600449 -137087405 - AluSx SINE Alu -12 300 1 1801 236 43 42 chr2 113600449 113600565 -137087289 - L1ME1 LINE L1 -1283 4952 4838 734 265 0 15 chr2 113600571 113600771 -137087083 - L1ME1 LINE L1 -1505 4710 4514 432 0 0 0 chr2 113600856 113600904 -137086950 + (TG)n Simple_repeat Simple_repeat 1 48 0 1219 167 0 5 chr2 113600916 113601102 -137086752 - AluJo SINE Alu -41 271 87 2232 253 92 19 chr2 113601102 113602634 -137085220 - L1ME1 LINE L1 -3932 2464 755 3996 196 112 9 chr2 113602649 113602797 -137085057 - L1MC3 LINE L1 -15 7770 7639 2494 72 3 0 chr2 113602797 113603103 -137084751 - AluY SINE Alu -4 307 1 3996 196 112 9 chr2 113603103 113603883 -137083971 - L1MC3 LINE L1 -146 7639 6746 816 163 0 81 chr2 113603884 113604044 -137083810 - MER46A DNA MER2_type -89 147 1 931 264 0 0 chr2 113604046 113604262 -137083592 - L1ME1 LINE L1 -5645 751 536 1474 263 43 0 chr2 113604305 113604772 -137083082 + L1MEc LINE L1 1925 2411 -3985 1355 109 0 128 chr2 113604797 113605054 -137082800 + AluSc SINE Alu 73 296 -13 1010 264 129 4 chr2 113605067 113605549 -137082305 + L1MEc LINE L1 3027 3568 -2647 5465 153 22 31 chr2 113605660 113606272 -137081582 + L1MB3 LINE L1 4912 5528 -655 2304 105 0 0 chr2 113606272 113606567 -137081287 + AluSq SINE Alu 5 299 -14 5465 153 22 31 chr2 113606567 113607233 -137080621 + L1MB3 LINE L1 5528 6181 -2 230 234 14 28 chr2 113608511 113608592 -137079262 + CT-rich Low_complexity Low_complexity 2 139 0 479 217 2 19 chr2 113609738 113609885 -137077969 - MIR SINE MIR -63 145 21 2462 171 81 0 chr2 113612177 113612644 -137075210 + MLT1D LTR MaLR 1 505 0 399 272 48 20 chr2 113613270 113613417 -137074437 - MIR SINE MIR -78 184 34 298 292 93 26 chr2 113613657 113613883 -137073971 - L2 LINE L2 -229 3043 2793 225 278 10 10 chr2 113614143 113614259 -137073595 + CT-rich Low_complexity Low_complexity 1 116 0 318 98 0 0 chr2 113614261 113614312 -137073542 + (TCC)n Simple_repeat Simple_repeat 2 52 0 1800 157 7 11 chr2 113614314 113614595 -137073259 - AluJb SINE Alu -32 280 1 201 370 60 27 chr2 113614690 113614874 -137072980 - L2 LINE L2 -213 3059 2870 1591 184 103 32 chr2 113615212 113615560 -137072294 - MER93b LTR ERV1 0 373 1 190 172 0 35 chr2 113616246 113616304 -137071550 + (TG)n Simple_repeat Simple_repeat 1 56 0 180 356 0 0 chr2 113617243 113617302 -137070552 - L2 LINE L2 -80 3192 3134 510 287 162 46 chr2 113617739 113618153 -137069701 + L2 LINE L2 2851 3312 -1 611 254 118 68 chr2 113618360 113618715 -137069139 - MLT1H LTR MaLR 0 549 177 441 235 36 60 chr2 113618810 113618978 -137068876 - MLT1H LTR MaLR -376 173 20 193 369 0 0 chr2 113618982 113619066 -137068788 - MIR SINE MIR -177 85 2 231 282 26 0 chr2 113619112 113619190 -137068664 - L2 LINE L2 0 3272 3193 257 301 66 55 chr2 113619724 113619907 -137067947 + MER5A DNA MER1_type 1 185 -4 2031 178 12 0 chr2 113620799 113621142 -137066712 - MER7A DNA MER2_type -1 345 1 510 260 8 0 chr2 113621168 113621295 -137066559 + MER91B DNA MER1_type 3 130 -60 1269 314 92 47 chr2 113621419 113622555 -137065299 - L2 LINE L2 -497 2817 1631 237 308 0 0 chr2 113622589 113622641 -137065213 + MIR SINE MIR 24 75 -187 2087 118 3 0 chr2 113622763 113623068 -137064786 + AluSx SINE Alu 1 306 -6 2040 119 3 0 chr2 113623068 113623361 -137064493 + AluSp SINE Alu 1 294 -19 398 214 22 0 chr2 113623483 113623572 -137064282 - MLT1G1 LTR MaLR 0 595 505 * 765 108 0 0 chr2 113623557 113623659 -137064195 + U6 snRNA snRNA 1 102 -5 1163 257 117 44 chr2 113623708 113624144 -137063710 - MLT1G1 LTR MaLR -82 513 6 1936 133 20 0 chr2 113624355 113624657 -137063197 + AluSg SINE Alu 1 308 -2 223 379 49 23 chr2 113625154 113625418 -137062436 - L2 LINE L2 -1701 1613 1343 378 334 91 63 chr2 113625618 113626222 -137061632 - L2 LINE L2 -2380 934 314 495 255 90 48 chr2 113626238 113626426 -137061428 - L2 LINE L2 -1 3312 3117 556 311 56 77 chr2 113627614 113628057 -137059797 + L2 LINE L2 2227 2660 -654 360 165 35 35 chr2 113628078 113628163 -137059691 - LTR9 LTR ERV1 -85 527 443 391 331 116 50 chr2 113628413 113628733 -137059121 + L2 LINE L2 2932 3272 0 329 264 9 0 chr2 113628733 113628843 -137059011 + GA-rich Low_complexity Low_complexity 2 112 0 2127 117 0 3 chr2 113629430 113629739 -137058115 + AluSq SINE Alu 1 308 -5 267 276 26 13 chr2 113629789 113629865 -137057989 - LTR67 LTR ERVL -382 175 99 193 301 101 53 chr2 113630261 113630433 -137057421 + MIR SINE MIR 23 205 -57 253 245 0 19 chr2 113630863 113630916 -137056938 + MER113 DNA MER1_type? 464 515 -6 9976 179 14 24 chr2 113631294 113631322 -137056532 - L1PB1 LINE L1 -319 6548 6521 1632 95 4 9 chr2 113631322 113631554 -137056300 - L1PB1 LINE L1 -4 6147 5917 9976 179 14 24 chr2 113631554 113632619 -137055235 - L1PB1 LINE L1 -346 6521 5447 5786 36 0 1 chr2 113632619 113633293 -137054561 - SVA Other Other -5 1381 709 9976 179 14 24 chr2 113633293 113634929 -137052925 - L1PB1 LINE L1 -1420 5447 3849 3738 171 96 57 chr2 113634921 113635975 -137051879 - L1PB1 LINE L1 -5158 1705 611 * 1342 135 0 0 chr2 113635952 113636152 -137051702 - L1PB1 LINE L1 -6663 200 1 * 222 37 0 0 chr2 113636168 113636195 -137051659 + (T)n Simple_repeat Simple_repeat 1 27 0 1801 86 0 4 chr2 113636621 113636877 -137050977 - AluSx SINE Alu -7 305 51 25 31 0 0 chr2 113637351 113637383 -137050471 + GC_rich Low_complexity Low_complexity 1 32 0 5716 198 11 13 chr2 113637680 113638911 -137048943 - L1 LINE L1 -1785 4361 3133 3368 193 185 75 chr2 113638903 113640440 -137047414 - L1PBa LINE L1 -5158 1705 1 * 1315 62 0 42 chr2 113640452 113640645 -137047209 - AluY SINE Alu -2 309 125 2070 59 7 21 chr2 113640771 113641060 -137046794 + AluY SINE Alu 13 297 -14 423 277 102 15 chr2 113641307 113641444 -137046410 - MIR SINE MIR -102 160 12 2566 116 52 7 chr2 113641573 113641977 -137045877 - MER34B LTR ERV1 0 565 144 2306 93 3 0 chr2 113642470 113642782 -137045072 - AluSp SINE Alu 0 313 1 1024 184 144 68 chr2 113642806 113643159 -137044695 - MLT1B LTR MaLR 0 390 11 2351 120 55 16 chr2 113643243 113643676 -137044178 - LTR7 LTR ERV1 0 450 1 371 254 56 24 chr2 113643728 113643854 -137044000 - MER117 DNA MER1_type -42 155 26 1908 229 81 2 chr2 113643957 113644425 -137043429 + MLT1D LTR MaLR 1 505 0 181 253 67 40 chr2 113645367 113645442 -137042412 + L2 LINE L2 3173 3249 -23 * 457 255 5 69 chr2 113645415 113645611 -137042243 - MIR SINE MIR -4 258 28 215 366 104 57 chr2 113645639 113645956 -137041898 - L2 LINE L2 -86 3186 2855 292 310 99 26 chr2 113646376 113646679 -137041175 - L1ME4a LINE L1 -246 5875 5551 754 239 75 57 chr2 113647455 113647945 -137039909 + L1MEd LINE L1 826 1324 -4881 324 261 39 94 chr2 113648038 113648159 -137039695 + L1MEd LINE L1 1316 1442 -4954 1887 120 0 32 chr2 113648159 113648443 -137039411 + AluSx SINE Alu 1 275 -37 243 0 0 0 chr2 113648449 113648476 -137039378 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 324 261 39 94 chr2 113648476 113648528 -137039326 + L1MEd LINE L1 1447 1675 -4721 244 149 0 21 chr2 113648575 113648622 -137039232 - L1MA3 LINE L1 -100 6205 6160 1545 174 45 137 chr2 113648679 113648980 -137038874 - MLT1D LTR MaLR 0 505 277 1481 46 10 10 chr2 113648980 113649176 -137038678 - L1PA4 LINE L1 0 6155 5960 1545 174 45 137 chr2 113649176 113649430 -137038424 - MLT1D LTR MaLR -228 277 1 303 328 8 17 chr2 113649660 113649779 -137038075 + L1MEd LINE L1 2023 2140 -4256 2002 99 11 0 chr2 113649864 113650146 -137037708 + AluSp SINE Alu 17 301 -12 392 297 75 20 chr2 113650161 113650508 -137037346 + L1MEd LINE L1 2190 2555 -3660 261 234 0 16 chr2 113650577 113650641 -137037213 - MIR SINE MIR -90 172 110 292 288 147 40 chr2 113651342 113651519 -137036335 + MIR SINE MIR 57 252 -10 323 249 41 130 chr2 113651887 113652056 -137035798 - MIR SINE MIR -75 187 34 281 233 61 0 chr2 113652106 113652206 -137035648 + MIR SINE MIR 99 205 -57 539 259 155 42 chr2 113652281 113652520 -137035334 + LTR16A LTR ERVL 148 413 -37 283 318 57 89 chr2 113653333 113653613 -137034241 + L2 LINE L2 2989 3259 -13 2934 175 22 34 chr2 113653858 113654497 -137033357 + L1MA10 LINE L1 5702 6332 -2 199 70 23 23 chr2 113655369 113655412 -137032442 + (TG)n Simple_repeat Simple_repeat 1 43 0 305 286 78 0 chr2 113655451 113655528 -137032326 - L2 LINE L2 -18 3254 3172 272 242 129 45 chr2 113655581 113655713 -137032141 - L2 LINE L2 -248 3024 2882 340 245 270 37 chr2 113656743 113656906 -137030948 - MIR SINE MIR -34 228 28 304 310 17 22 chr2 113657587 113657725 -137030129 - MIR SINE MIR -65 143 43 898 223 177 48 chr2 113657981 113658354 -137029500 + L2 LINE L2 2890 3310 -3 317 271 47 19 chr2 113659220 113659327 -137028527 - Charlie8 DNA MER1_type -2210 207 98 1905 154 0 0 chr2 113659483 113659775 -137028079 + AluSx SINE Alu 1 292 -20 708 245 101 10 chr2 113659963 113660171 -137027683 - MIR SINE MIR -35 227 1 200 209 0 23 chr2 113660437 113660480 -137027374 + L2 LINE L2 3268 3309 -4 273 183 50 0 chr2 113660711 113660771 -137027083 + MIR SINE MIR 83 145 -63 200 176 0 0 chr2 113660802 113660836 -137027018 + GA-rich Low_complexity Low_complexity 1 34 0 300 70 0 0 chr2 113661066 113661109 -137026745 + (TATG)n Simple_repeat Simple_repeat 2 44 0 470 272 9 9 chr2 113661247 113661361 -137026493 + MER81 DNA DNA 1 114 0 190 267 217 0 chr2 113661618 113661678 -137026176 + MIR SINE MIR 48 120 -142 1083 139 0 0 chr2 113661686 113661866 -137025988 + (TTC)n Simple_repeat Simple_repeat 1 180 0 550 29 0 0 chr2 113661898 113661966 -137025888 - MER41A LTR ERV1 -87 467 400 736 212 109 0 chr2 113663141 113663306 -137024548 - MER63A DNA MER1_type -27 183 1 2193 105 3 0 chr2 113663572 113663877 -137023977 + AluSp SINE Alu 1 306 -7 304 236 0 47 chr2 113664520 113664640 -137023214 + L1ME LINE L1 782 893 -5190 303 200 46 15 chr2 113664640 113664705 -137023149 - MIR SINE MIR -4 258 192 206 268 14 56 chr2 113664810 113664881 -137022973 + L2 LINE L2 3236 3303 -10 323 350 106 6 chr2 113665346 113665526 -137022328 - MIR SINE MIR -19 243 46 181 349 16 0 chr2 113666138 113666201 -137021653 - MIR SINE MIR -147 115 52 2124 116 3 0 chr2 113666527 113666830 -137021024 - AluSx SINE Alu -8 304 1 467 241 48 109 chr2 113667011 113667192 -137020662 + MIR3 SINE MIR 8 187 -21 243 146 0 0 chr2 113667402 113667443 -137020411 + (TCCC)n Simple_repeat Simple_repeat 1 41 0 304 246 45 73 chr2 113667469 113667579 -137020275 - MIR SINE MIR -61 147 41 759 221 133 5 chr2 113667687 113667882 -137019972 + MER58A DNA MER1_type 1 220 -4 268 282 97 58 chr2 113668897 113669000 -137018854 + MIR SINE MIR 130 236 -26 207 209 75 15 chr2 113669446 113669513 -137018341 - MIR SINE MIR -79 183 113 1015 184 5 30 chr2 113669801 113670002 -137017852 - MER3 DNA MER1_type -13 196 1 279 322 27 64 chr2 113670062 113670265 -137017589 + MIR SINE MIR 38 234 -28 229 353 81 15 chr2 113670809 113670945 -137016909 + MIR3 SINE MIR 54 198 -10 494 254 149 54 chr2 113671732 113672174 -137015680 - MLT1H LTR MaLR -26 523 1 2325 90 0 3 chr2 113672720 113673008 -137014846 + AluSg SINE Alu 1 287 -23 326 300 36 21 chr2 113674359 113674499 -137013355 + L2 LINE L2 3123 3264 -8 678 246 60 17 chr2 113674757 113674989 -137012865 + L1ME3A LINE L1 5704 5945 -225 220 295 54 31 chr2 113675412 113675541 -137012313 + MIR3 SINE MIR 30 161 -47 185 385 0 0 chr2 113675810 113675875 -137011979 + MIR SINE MIR 84 148 -114 288 358 75 0 chr2 113676072 113676206 -137011648 + MIR SINE MIR 8 151 -111 394 218 282 7 chr2 113676336 113676478 -137011376 + MER5A DNA MER1_type 9 189 0 2309 128 3 0 chr2 113676492 113676804 -137011050 + AluSq SINE Alu 1 313 0 2010 159 7 7 chr2 113676944 113677246 -137010608 + AluSx SINE Alu 1 302 -10 418 252 8 46 chr2 113677317 113677448 -137010406 + L2 LINE L2 3188 3313 0 1621 229 31 39 chr2 113677565 113678084 -137009770 - LTR55 LTR ERV -1 547 33 379 265 61 10 chr2 113678356 113678454 -137009400 + MIR3 SINE MIR 58 160 -48 283 265 29 39 chr2 113678463 113678565 -137009289 - MER5B DNA MER1_type -24 154 54 773 150 8 23 chr2 113679177 113679310 -137008544 - FLAM_C SINE Alu -2 131 1 218 79 0 26 chr2 113680567 113680605 -137007249 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 3615 107 35 4 chr2 113680605 113680963 -137006891 - L1PB1 LINE L1 -9 6142 5760 222 58 0 58 chr2 113680963 113681015 -137006839 + (TA)n Simple_repeat Simple_repeat 1 49 0 3615 107 35 4 chr2 113681015 113681196 -137006658 - L1PB1 LINE L1 -391 5760 5586 517 248 42 113 chr2 113681214 113681437 -137006417 + L2 LINE L2 2935 3131 -182 2182 86 24 0 chr2 113681437 113681727 -137006127 + AluSp SINE Alu 5 301 -12 517 248 42 113 chr2 113681727 113681814 -137006040 + L2 LINE L2 3131 3223 -90 1582 136 115 14 chr2 113682842 113683121 -137004733 + AluJo SINE Alu 1 307 -5 2830 213 51 43 chr2 113683320 113683913 -137003941 - L1ME2 LINE L1 -36 6128 5524 2121 104 0 80 chr2 113683913 113684251 -137003603 + AluSx SINE Alu 1 311 -1 2830 213 51 43 chr2 113684251 113684498 -137003356 - L1ME2 LINE L1 -640 5524 5281 6831 184 16 15 chr2 113684514 113687260 -137000594 - L1MA2 LINE L1 0 7723 3342 463 185 0 0 chr2 113687264 113687345 -137000509 - AluS SINE Alu -12 300 220 19336 133 28 26 chr2 113687345 113687513 -137000341 - L1M1 LINE L1 -4220 3345 3179 1990 160 0 0 chr2 113687513 113687807 -137000047 + AluJb SINE Alu 1 294 -18 19336 133 28 26 chr2 113687807 113688620 -136999234 - L1M1 LINE L1 -4386 3179 2369 1958 165 3 0 chr2 113688620 113688917 -136998937 + AluSx SINE Alu 1 298 -14 19336 133 28 26 chr2 113688917 113691140 -136996714 - L1M1 LINE L1 -5196 2369 132 2294 74 40 0 chr2 113691140 113691436 -136996418 - AluSp SINE Alu -5 308 1 19336 133 28 26 chr2 113691436 113691555 -136996299 - L1M1 LINE L1 -7433 132 15 1622 192 69 0 chr2 113691558 113691922 -136995932 - L1M4 LINE L1 -542 5576 5188 506 213 92 18 chr2 113691930 113692094 -136995760 - L1M4 LINE L1 -1194 4886 4711 * 1407 232 116 66 chr2 113692067 113692601 -136995253 - L1M4 LINE L1 -3182 2898 2310 2244 142 0 0 chr2 113692601 113692912 -136994942 - AluSx SINE Alu -1 311 1 1407 232 116 66 chr2 113692912 113693170 -136994684 - L1M4 LINE L1 -3770 2310 2066 308 287 74 8 chr2 113693171 113693293 -136994561 - L1M4 LINE L1 -4169 2092 1963 740 261 109 45 chr2 113693297 113693730 -136994124 - L1M4 LINE L1 -4379 1882 1404 1937 143 4 0 chr2 113693730 113694030 -136993824 + AluSx SINE Alu 1 301 0 740 261 109 45 chr2 113694030 113694144 -136993710 - L1M4 LINE L1 -4857 1404 1299 492 187 138 16 chr2 113694148 113694271 -136993583 - LTR40b LTR ERVL -1 461 324 1345 78 0 0 chr2 113694295 113694462 -136993392 - AluSg/x SINE Alu -9 301 135 2461 80 0 0 chr2 113694548 113694849 -136993005 + AluY SINE Alu 1 301 -10 550 312 33 15 chr2 113695055 113695388 -136992466 - L1M4 LINE L1 -5398 863 525 312 344 38 25 chr2 113695550 113695707 -136992147 - L1M4 LINE L1 -5584 486 328 2979 138 63 28 chr2 113695965 113696474 -136991380 + MER1A DNA MER1_type 1 527 0 529 217 211 12 chr2 113696493 113696659 -136991195 + MIR SINE MIR 63 261 -1 1968 128 76 173 chr2 113696775 113697300 -136990554 + MER101 LTR ERV1 1 474 0 236 198 37 49 chr2 113697839 113697920 -136989934 + C-rich Low_complexity Low_complexity 1 80 0 302 285 207 47 chr2 113699101 113699294 -136988560 - L2 LINE L2 0 3313 3090 1469 230 67 37 chr2 113699599 113700029 -136987825 - L2 LINE L2 -4 3309 2867 1451 137 5 0 chr2 113700284 113700495 -136987359 + AluSg/x SINE Alu 86 297 -15 596 100 0 0 chr2 113700581 113700661 -136987193 + MADE1 DNA Mariner 1 80 0 766 270 36 24 chr2 113700812 113701064 -136986790 - MIR SINE MIR -3 259 5 2028 131 20 7 chr2 113701201 113701318 -136986536 + AluSx SINE Alu 1 115 -197 279 0 0 0 chr2 113701318 113701349 -136986505 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 2028 131 20 7 chr2 113701349 113701536 -136986318 + AluSx SINE Alu 115 309 -3 2487 93 3 0 chr2 113701823 113702133 -136985721 + AluSp SINE Alu 1 311 -2 2316 106 3 0 chr2 113702466 113702769 -136985085 - AluSc SINE Alu -5 304 1 1223 128 4 88 chr2 113702773 113703000 -136984854 - AluJb SINE Alu -16 296 89 455 247 105 23 chr2 113703384 113703603 -136984251 - L1MC/D LINE L1 -2279 5529 5293 1445 183 0 82 chr2 113703806 113704112 -136983742 + AluJo SINE Alu 1 281 -31 487 98 244 0 chr2 113704179 113704261 -136983593 - AluSc SINE Alu -14 295 194 1074 110 7 0 chr2 113704262 113704407 -136983447 - AluSq/x SINE Alu -167 146 1 2187 119 0 7 chr2 113704420 113704722 -136983132 - AluSg SINE Alu -10 300 1 40 21 0 0 chr2 113706360 113706407 -136981447 + AT_rich Low_complexity Low_complexity 1 47 0 376 193 76 72 chr2 113706669 113706870 -136980984 - MER34 LTR ERV1 -1 541 450 305 268 88 78 chr2 113706890 113707075 -136980779 - L1ME4a LINE L1 -2 6119 5937 2384 102 0 6 chr2 113707075 113707388 -136980466 + AluSx SINE Alu 1 311 -1 305 268 88 78 chr2 113707388 113707623 -136980231 - L1ME4a LINE L1 -184 5937 5695 231 313 194 25 chr2 113708643 113708803 -136979051 + MIR3 SINE MIR 2 188 -20 432 0 0 0 chr2 113709182 113709230 -136978624 + (CA)n Simple_repeat Simple_repeat 2 49 0 257 309 228 0 chr2 113709322 113709471 -136978383 - L2 LINE L2 -1 3271 3089 300 315 44 39 chr2 113709631 113709834 -136978020 + L2 LINE L2 1900 2103 -1211 647 301 113 79 chr2 113709848 113709949 -136977905 + L2 LINE L2 2240 2336 -977 2133 91 33 0 chr2 113709949 113710270 -136977584 + AluSp SINE Alu 1 330 0 647 301 113 79 chr2 113710270 113710697 -136977157 + L2 LINE L2 2336 2747 -566 2169 129 0 3 chr2 113710697 113711000 -136976854 + AluSx SINE Alu 1 302 -10 2303 106 0 0 chr2 113711000 113711301 -136976553 + AluY SINE Alu 1 301 -10 2185 131 7 0 chr2 113711310 113711601 -136976253 + AluSx SINE Alu 1 293 -19 647 301 113 79 chr2 113711601 113711991 -136975863 + L2 LINE L2 2754 3223 -90 1958 162 137 29 chr2 113711991 113712399 -136975455 - LTR47A LTR ERVL 0 452 1 647 301 113 79 chr2 113712399 113712466 -136975388 + L2 LINE L2 3223 3286 -27 516 241 62 76 chr2 113712683 113712802 -136975052 - MER115 DNA AcHobo -1 692 573 2357 78 7 0 chr2 113712802 113713095 -136974759 + AluSp SINE Alu 2 296 -17 516 241 62 76 chr2 113713095 113713265 -136974589 - MER115 DNA AcHobo -120 573 407 293 278 56 68 chr2 113713409 113713571 -136974283 - MER115 DNA AcHobo -481 212 53 445 268 65 26 chr2 113713868 113714021 -136973833 + MIR SINE MIR 40 198 -64 189 0 0 0 chr2 113715913 113715934 -136971920 + (TC)n Simple_repeat Simple_repeat 2 22 0 334 300 162 38 chr2 113716428 113716612 -136971242 - MIR SINE MIR -13 249 45 239 271 0 0 chr2 113718326 113718385 -136969469 - L2 LINE L2 -64 3249 3191 2155 134 0 0 chr2 113718507 113718797 -136969057 + AluSx SINE Alu 1 290 -22 1007 129 37 0 chr2 113719989 113720152 -136967702 - MER41B LTR ERV1 0 635 467 957 107 7 0 chr2 113720161 113720301 -136967553 - MER41B LTR ERV1 -492 143 3 181 281 22 56 chr2 113720838 113720927 -136966927 - MIR SINE MIR -140 122 37 227 281 132 18 chr2 113721123 113721237 -136966617 + MIR3 SINE MIR 15 141 -67 2183 121 0 33 chr2 113721508 113721815 -136966039 + AluSx SINE Alu 2 298 -14 1922 113 34 0 chr2 113724945 113725237 -136962617 - AluSx SINE Alu -7 305 4 465 318 45 11 chr2 113725564 113725743 -136962111 + MIR3 SINE MIR 14 198 -10 210 259 35 0 chr2 113725834 113725892 -136961962 + C-rich Low_complexity Low_complexity 4 63 0 1833 132 6 50 chr2 113728811 113729129 -136958725 - AluSq SINE Alu -9 304 1 2008 77 44 0 chr2 113729137 113729439 -136958415 - AluYa5 SINE Alu 0 314 1 2593 114 0 3 chr2 113729485 113729854 -136958000 - L1PB1 LINE L1 -2 6149 5782 230 232 12 24 chr2 113729863 113729945 -136957909 + (TA)n Simple_repeat Simple_repeat 2 82 0 3583 133 8 11 chr2 113729946 113730848 -136957006 - L1PB1 LINE L1 -361 5790 4892 465 226 9 0 chr2 113730844 113730959 -136956895 - L1PB1 LINE L1 -1201 4945 4830 * 371 150 0 0 chr2 113730959 113731005 -136956849 + L1MB8 LINE L1 6110 6169 -9 1630 166 3 62 chr2 113731006 113731326 -136956528 - AluJb SINE Alu -11 301 1 1761 157 20 0 chr2 113731845 113732139 -136955715 - AluSx SINE Alu -10 302 3 204 258 0 30 chr2 113733241 113733307 -136954547 + CT-rich Low_complexity Low_complexity 5 68 0 455 316 36 12 chr2 113734660 113734828 -136953026 + MER5A DNA MER1_type 12 183 -6 249 291 250 36 chr2 113734841 113735037 -136952817 + MIR SINE MIR 10 247 -15 1692 179 50 0 chr2 113735065 113735383 -136952471 - Tigger3(Golem) DNA MER2_type 0 3029 2696 374 222 0 89 chr2 113735358 113735448 -136952406 - Tigger3(Golem) DNA MER2_type -2947 82 1 * 306 273 0 39 chr2 113735454 113735531 -136952323 - L2 LINE L2 -13 3259 3186 256 265 20 108 chr2 113735704 113735734 -136952120 + L2 LINE L2 3169 3200 -72 2097 88 20 20 chr2 113735734 113736031 -136951823 - AluSx SINE Alu -14 298 2 256 265 20 108 chr2 113736031 113736102 -136951752 + L2 LINE L2 3200 3261 -11 405 0 0 0 chr2 113736105 113736150 -136951704 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 253 349 28 0 chr2 113737259 113737365 -136950489 - L2 LINE L2 -221 3051 2943 1827 89 0 4 chr2 113738836 113739094 -136948760 - AluSx SINE Alu -5 307 51 476 198 104 0 chr2 113740216 113740322 -136947532 - MIR SINE MIR -55 207 91 2189 105 3 0 chr2 113740386 113740692 -136947162 - AluSx SINE Alu -5 307 1 212 128 0 21 chr2 113743570 113743617 -136944237 + (TG)n Simple_repeat Simple_repeat 2 47 0 241 282 14 28 chr2 113743631 113743702 -136944152 - MIR3 SINE MIR 0 208 139 245 245 186 0 chr2 113743706 113743808 -136944046 - L2 LINE L2 0 3313 3193 292 275 58 42 chr2 113743855 113743975 -136943879 - MER5B DNA MER1_type -36 142 21 2244 101 16 0 chr2 113744119 113744427 -136943427 - AluSq SINE Alu 0 313 1 2174 101 3 3 chr2 113745539 113745835 -136942019 - AluSx SINE Alu -16 296 1 2187 109 0 0 chr2 113745915 113746217 -136941637 + AluSx SINE Alu 1 302 -10 266 122 0 0 chr2 113746265 113746322 -136941532 + L1MD3 LINE L1 7930 8040 -2 655 295 78 0 chr2 113747077 113747294 -136940560 + MIR SINE MIR 27 260 -2 565 319 120 39 chr2 113747423 113747865 -136939989 - MLT1K LTR MaLR -24 564 87 209 305 86 37 chr2 113747927 113748017 -136939837 + L2 LINE L2 3021 3105 -167 2435 62 0 7 chr2 113748017 113748325 -136939529 - AluY SINE Alu -5 306 1 209 305 86 37 chr2 113748325 113748421 -136939433 + L2 LINE L2 3105 3216 -56 1685 98 4 0 chr2 113748497 113748722 -136939132 - AluSg SINE Alu -54 256 31 181 369 0 0 chr2 113748845 113748910 -136938944 + L2 LINE L2 2234 2298 -1016 28 0 0 0 chr2 113749920 113749948 -136937906 + AT_rich Low_complexity Low_complexity 1 28 0 215 277 265 0 chr2 113749953 113750036 -136937818 + L2 LINE L2 3123 3227 -45 183 80 0 0 chr2 113751770 113751795 -136936059 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 228 194 0 65 chr2 113753118 113753180 -136934674 + G-rich Low_complexity Low_complexity 5 62 0 255 136 39 39 chr2 113753861 113753964 -136933890 + GA-rich Low_complexity Low_complexity 1 103 0 358 292 21 0 chr2 113754643 113754739 -136933115 + MIR SINE MIR 52 149 -59 2319 98 0 0 chr2 113755055 113755361 -136932493 - AluSg SINE Alu -4 306 1 271 280 142 24 chr2 113757355 113757550 -136930304 + MIR SINE MIR 15 245 -17 313 293 86 17 chr2 113760992 113761108 -136926746 - MIR SINE MIR -80 182 59 454 336 19 33 chr2 113761605 113761816 -136926038 - MIR SINE MIR -50 212 5 729 253 8 83 chr2 113761961 113762214 -136925640 + MIR SINE MIR 29 262 0 368 303 55 7 chr2 113762587 113762732 -136925122 - MIR3 SINE MIR -38 170 19 180 152 0 0 chr2 113762917 113762950 -136924904 + (CTCA)n Simple_repeat Simple_repeat 3 35 0 1184 282 230 17 chr2 113763066 113764069 -136923785 + L2 LINE L2 1490 2706 -608 742 261 165 23 chr2 113764098 113764450 -136923404 + L2 LINE L2 2907 3308 -5 304 243 14 0 chr2 113764460 113764608 -136923246 + (TGGA)n Simple_repeat Simple_repeat 4 153 0 308 269 94 60 chr2 113764671 113764820 -136923034 + L1MEd LINE L1 958 1111 -5008 227 250 26 0 chr2 113764820 113764829 -136923025 + (TGGA)n Simple_repeat Simple_repeat 2 9 -152 2141 127 0 0 chr2 113764829 113765137 -136922717 + AluSx SINE Alu 1 308 -4 227 250 26 0 chr2 113765137 113765283 -136922571 + (TGGA)n Simple_repeat Simple_repeat 9 161 0 745 10 50 0 chr2 113765356 113765455 -136922399 + (TAAAA)n Simple_repeat Simple_repeat 2 105 0 349 328 60 30 chr2 113765548 113765783 -136922071 + MIR SINE MIR 2 243 -19 186 43 0 0 chr2 113766505 113766528 -136921326 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 208 216 0 0 chr2 113766654 113766691 -136921163 + polypyrimidine Low_complexity Low_complexity 1 37 0 363 44 0 0 chr2 113767213 113767258 -136920596 + (CAT)n Simple_repeat Simple_repeat 3 47 0 229 250 0 0 chr2 113768337 113768385 -136919469 - MER117 DNA MER1_type -48 149 102 358 308 31 8 chr2 113768832 113768962 -136918892 - MER94 DNA DNA -1 133 1 1176 173 18 49 chr2 113768979 113769205 -136918649 - MER20 DNA MER1_type 0 219 1 282 250 0 14 chr2 113769517 113769589 -136918265 - L2 LINE L2 -5 3308 3238 314 298 47 83 chr2 113769721 113769891 -136917963 + MIR SINE MIR 21 182 -65 261 197 0 61 chr2 113770647 113770713 -136917141 + MER117 DNA MER1_type 38 99 -98 2422 77 3 0 chr2 113772279 113772589 -136915265 - AluSp SINE Alu 0 313 3 404 122 0 14 chr2 113773584 113773658 -136914196 + (TCCCC)n Simple_repeat Simple_repeat 2 74 0 2325 109 7 3 chr2 113773963 113774266 -136913588 + AluSc SINE Alu 1 304 -5 266 311 115 27 chr2 113774594 113774777 -136913077 - L3 LINE CR1 -131 1446 1248 268 231 77 0 chr2 113774978 113775069 -136912785 + MIR3 SINE MIR 88 185 -23 2137 127 3 0 chr2 113775074 113775381 -136912473 - AluSg SINE Alu -2 308 1 270 277 161 0 chr2 113777658 113777788 -136910066 - MIR SINE MIR -110 152 2 183 374 70 12 chr2 113777807 113777978 -136909876 - MIR SINE MIR -25 237 57 2148 119 7 10 chr2 113778618 113778921 -136908933 - AluSq SINE Alu -11 302 1 396 301 56 70 chr2 113779212 113779425 -136908429 + MIR SINE MIR 53 262 0 2301 114 0 0 chr2 113779622 113779919 -136907935 - AluSx SINE Alu -15 297 1 232 125 25 0 chr2 113780219 113780259 -136907595 + MIR3 SINE MIR 114 154 -54 194 357 0 0 chr2 113780440 113780510 -136907344 + MIR3 SINE MIR 139 208 0 300 333 53 60 chr2 113781293 113781762 -136906092 - L2 LINE L2 -1 3271 2806 228 220 0 0 chr2 113783135 113783185 -136904669 + (TG)n Simple_repeat Simple_repeat 1 50 0 540 353 118 8 chr2 113783394 113783918 -136903936 + L2 LINE L2 2285 2866 -448 2338 128 0 0 chr2 113783930 113784242 -136903612 - AluSq SINE Alu -1 312 1 188 264 57 0 chr2 113784460 113784513 -136903341 + L2 LINE L2 3134 3189 -83 209 261 9 0 chr2 113784529 113784644 -136903210 + (TGAA)n Simple_repeat Simple_repeat 3 118 0 2165 139 3 0 chr2 113785588 113785897 -136901957 - AluSx SINE Alu -2 310 1 337 184 50 164 chr2 113786648 113786849 -136901005 - MER5B DNA MER1_type 0 178 1 233 272 97 10 chr2 113787794 113787897 -136899957 + MIR SINE MIR 36 147 -61 720 291 36 80 chr2 113788274 113788663 -136899191 - L2 LINE L2 0 3272 2901 204 271 19 84 chr2 113788724 113788831 -136899023 - MIR SINE MIR -115 147 48 2318 92 7 23 chr2 113789228 113789533 -136898321 + AluSp SINE Alu 1 300 -13 2548 76 0 0 chr2 113790537 113790839 -136897015 + AluY SINE Alu 1 302 -9 896 195 16 27 chr2 113790979 113791164 -136896690 - MER5A DNA MER1_type -6 183 1 323 299 60 37 chr2 113791268 113791402 -136896452 - L2 LINE L2 -1 3312 3176 312 314 67 25 chr2 113794022 113794261 -136893593 + L2 LINE L2 2825 3073 -199 248 291 150 82 chr2 113794736 113795042 -136892812 - L2 LINE L2 0 3313 2987 352 369 51 13 chr2 113795051 113795472 -136892382 + L2 LINE L2 2628 3059 -213 871 160 11 0 chr2 113795556 113795731 -136892123 + GA-rich Low_complexity Low_complexity 3 179 0 595 139 17 0 chr2 113795763 113795878 -136891976 + GA-rich Low_complexity Low_complexity 2 118 0 855 260 200 0 chr2 113796662 113797005 -136890849 - LTR50 LTR ERVL -1 794 296 357 248 0 69 chr2 113797120 113797221 -136890633 + L1MC4 LINE L1 6609 6702 -1340 181 395 0 0 chr2 113797429 113797505 -136890349 + MIR SINE MIR 185 260 -2 245 279 23 12 chr2 113797536 113797622 -136890232 - L2 LINE L2 -43 3270 3184 434 332 54 17 chr2 113798333 113798574 -136889280 - MIR SINE MIR 0 262 13 341 284 121 9 chr2 113800089 113800205 -136887649 + MER5B DNA MER1_type 19 147 -31 197 384 0 45 chr2 113800637 113800749 -136887105 - L2 LINE L2 -19 3253 3147 237 226 0 0 chr2 113800848 113800932 -136886922 + (TG)n Simple_repeat Simple_repeat 2 85 0 234 231 0 0 chr2 113801369 113801421 -136886433 + L3 LINE CR1 1523 1574 -3 291 71 0 0 chr2 113801540 113801582 -136886272 + (TG)n Simple_repeat Simple_repeat 1 42 0 203 360 22 0 chr2 113802275 113802364 -136885490 - MIR SINE MIR -91 117 27 2119 111 3 36 chr2 113802484 113802791 -136885063 - AluSq SINE Alu -16 297 1 897 123 0 0 chr2 113802845 113802967 -136884887 - FLAM_C SINE Alu -11 132 11 1772 170 84 0 chr2 113803270 113803629 -136884225 + MLT1C LTR MaLR 79 467 0 237 33 0 0 chr2 113803906 113803936 -136883918 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 307 290 89 32 chr2 113804177 113804301 -136883553 - MIR SINE MIR -75 187 57 196 239 56 28 chr2 113804444 113804515 -136883339 - MER5A DNA MER1_type 0 189 117 * 202 318 111 0 chr2 113804477 113804540 -136883314 + MER5A DNA MER1_type 47 116 -73 263 191 16 0 chr2 113804582 113804645 -136883209 + GA-rich Low_complexity Low_complexity 3 66 0 233 342 96 57 chr2 113805212 113805630 -136882224 - L2 LINE L2 -14 3258 2825 266 321 76 8 chr2 113806341 113806472 -136881382 + L2 LINE L2 3174 3313 0 213 291 19 10 chr2 113808478 113808581 -136879273 + (TG)n Simple_repeat Simple_repeat 2 105 0 655 236 81 0 chr2 113808595 113808743 -136879111 - MER96 DNA MER1_type? -8 167 8 192 216 0 0 chr2 113808785 113808836 -136879018 + (TG)n Simple_repeat Simple_repeat 2 52 0 307 298 74 0 chr2 113809024 113809145 -136878709 + MIR3 SINE MIR 58 187 -21 26 0 0 0 chr2 113810402 113810428 -136877426 + AT_rich Low_complexity Low_complexity 1 26 0 189 284 60 0 chr2 113810715 113810782 -136877072 - MIR SINE MIR -51 211 141 220 285 36 15 chr2 113811016 113811128 -136876726 - MIR SINE MIR -58 150 35 188 214 95 0 chr2 113812155 113812197 -136875657 - MIR SINE MIR -98 164 119 246 204 68 117 chr2 113812444 113812547 -136875307 + MIR SINE MIR 104 201 -61 191 236 55 0 chr2 113812593 113812648 -136875206 - MIR SINE MIR 0 262 205 21 36 0 0 chr2 113814511 113814539 -136873315 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr2 113814683 113814709 -136873145 + (TG)n Simple_repeat Simple_repeat 2 27 0 208 294 0 35 chr2 113815167 113815252 -136872602 + CT-rich Low_complexity Low_complexity 4 85 0 22 0 0 0 chr2 113818457 113818479 -136869375 + GC_rich Low_complexity Low_complexity 1 22 0 285 29 0 0 chr2 113820813 113820847 -136867007 + (TG)n Simple_repeat Simple_repeat 1 34 0 233 296 14 14 chr2 113821895 113821966 -136865888 + MIR3 SINE MIR 103 173 -35 2132 128 3 3 chr2 113822114 113822410 -136865444 - AluSx SINE Alu -16 296 1 319 227 100 64 chr2 113822836 113822946 -136864908 + MER81 DNA DNA 1 114 0 203 269 97 97 chr2 113823311 113823497 -136864357 + MIR SINE MIR 77 262 0 180 0 0 0 chr2 113824305 113824325 -136863529 + (T)n Simple_repeat Simple_repeat 1 20 0 258 323 31 0 chr2 113824337 113824433 -136863421 - MIR SINE MIR -95 167 69 369 311 199 15 chr2 113825332 113825538 -136862316 - MIR SINE MIR -13 249 6 564 276 151 5 chr2 113826178 113826377 -136861477 + MIR SINE MIR 28 255 -7 279 106 128 0 chr2 113826836 113826883 -136860971 + AluSp/q SINE Alu 201 253 -50 214 169 70 70 chr2 113827413 113827484 -136860370 + MIR SINE MIR 22 92 -116 453 323 98 54 chr2 113827696 113828084 -136859770 - L2 LINE L2 -13 3259 2832 387 89 0 0 chr2 113828084 113828140 -136859714 + (TG)n Simple_repeat Simple_repeat 2 57 0 453 323 98 54 chr2 113828140 113828436 -136859418 - L2 LINE L2 -440 2832 2550 1016 283 26 16 chr2 113828728 113829036 -136858818 + L2 LINE L2 2990 3300 -13 217 244 0 0 chr2 113829105 113829146 -136858708 - L2 LINE L2 -51 3221 3181 1724 157 3 40 chr2 113830220 113830519 -136857335 - AluJo SINE Alu -22 290 3 532 271 114 14 chr2 113831109 113831319 -136856535 + MIR SINE MIR 28 258 -4 234 369 51 45 chr2 113832164 113832321 -136855533 - L2 LINE L2 -13 3259 3102 239 364 16 16 chr2 113832426 113832547 -136855307 - MIR SINE MIR -122 140 20 238 355 104 56 chr2 113832885 113833116 -136854738 + L2 LINE L2 3031 3272 0 464 276 52 35 chr2 113833705 113833879 -136853975 - MIR SINE MIR -65 197 21 294 263 42 11 chr2 113834334 113834429 -136853425 + L2 LINE L2 3200 3297 -16 723 24 0 0 chr2 113835086 113835092 -136852762 + (TTCC)n Simple_repeat Simple_repeat 1 91 0 723 24 0 0 chr2 113835092 113835177 -136852677 + (TTCC)n Simple_repeat Simple_repeat 4 88 0 504 369 55 12 chr2 113835577 113835902 -136851952 + L3 LINE CR1 948 1286 -291 2886 49 11 8 chr2 113836067 113836435 -136851419 - L1PB1 LINE L1 -10 6141 5773 186 280 0 20 chr2 113836579 113836629 -136851225 - MER5B DNA MER1_type -129 49 1 901 236 6 0 chr2 113836687 113836861 -136850993 + MER5A DNA MER1_type 13 187 -2 21 57 0 0 chr2 113836871 113836906 -136850948 + AT_rich Low_complexity Low_complexity 1 35 0 1921 221 36 58 chr2 113836946 113837494 -136850360 + MLT1F LTR MaLR 6 541 -1 753 12 0 0 chr2 113837604 113837690 -136850164 + (TTC)n Simple_repeat Simple_repeat 2 87 0 537 30 0 0 chr2 113838456 113838523 -136849331 + (CA)n Simple_repeat Simple_repeat 2 68 0 361 238 33 29 chr2 113838561 113838666 -136849188 + MIR3 SINE MIR 98 206 -2 2051 165 108 25 chr2 113839240 113839676 -136848178 + MLT2B1 LTR ERVL 1 472 -48 284 137 0 110 chr2 113839756 113839829 -136848025 + MLT2B1 LTR ERVL 456 520 0 225 0 0 0 chr2 113840152 113840177 -136847677 + (TC)n Simple_repeat Simple_repeat 2 26 0 1504 228 87 27 chr2 113840304 113840743 -136847111 - MLT1C LTR MaLR 0 467 3 252 0 0 0 chr2 113841268 113841296 -136846558 + (CA)n Simple_repeat Simple_repeat 2 29 0 1078 198 69 88 chr2 113841600 113841963 -136845891 + MLT1A1 LTR MaLR 4 359 -6 326 286 123 19 chr2 113843558 113843712 -136844142 - MIR SINE MIR -12 250 81 22 0 0 0 chr2 113844617 113844639 -136843215 + AT_rich Low_complexity Low_complexity 1 22 0 222 309 118 15 chr2 113845851 113845987 -136841867 + MIR3 SINE MIR 55 204 -4 531 247 17 9 chr2 113847032 113847166 -136840688 + MIR SINE MIR 20 154 -54 385 200 222 0 chr2 113847713 113847803 -136840051 - MER5B DNA MER1_type -1 177 68 646 229 14 0 chr2 113847999 113848143 -136839711 - L1ME1 LINE L1 -4 6162 6017 267 186 34 0 chr2 113848143 113848202 -136839652 - MER5B DNA MER1_type -114 64 4 209 304 38 25 chr2 113848314 113848393 -136839461 - MER5A DNA MER1_type -99 90 11 * 213 217 0 72 chr2 113848370 113848439 -136839415 - MIR3 SINE MIR -49 159 96 198 343 14 14 chr2 113848854 113848924 -136838930 - MIR3 SINE MIR -9 199 130 320 267 171 86 chr2 113849236 113849528 -136838326 + L3 LINE CR1 1158 1474 -103 247 325 133 0 chr2 113850039 113850159 -136837695 + MIR3 SINE MIR 64 199 -9 305 179 202 0 chr2 113850989 113851073 -136836781 - MER117 DNA MER1_type -78 119 19 523 309 30 20 chr2 113852363 113852564 -136835290 - MIR3 SINE MIR -2 206 4 355 239 42 92 chr2 113852759 113852901 -136834953 - MIR SINE MIR -59 203 69 431 232 11 11 chr2 113853191 113853286 -136834568 + MIR SINE MIR 38 132 -130 745 256 159 7 chr2 113853288 113853565 -136834289 - LTR16A LTR ERVL -39 411 93 374 320 13 24 chr2 113854195 113854359 -136833495 - MIR SINE MIR -67 141 24 241 243 27 14 chr2 113856339 113856413 -136831441 + GA-rich Low_complexity Low_complexity 4 78 0 363 340 76 65 chr2 113856853 113857209 -136830645 - L2 LINE L2 -5 3267 2908 300 289 61 18 chr2 113857282 113857396 -136830458 - MIR SINE MIR -125 137 19 743 206 0 8 chr2 113857952 113858078 -136829776 - FLAM_A SINE Alu -8 125 1 273 308 11 0 chr2 113858587 113858678 -136829176 + CT-rich Low_complexity Low_complexity 4 95 0 197 128 0 26 chr2 113858680 113858719 -136829135 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 628 229 119 25 chr2 113858945 113859146 -136828708 + MIR SINE MIR 20 239 -23 451 227 21 0 chr2 113859790 113859887 -136827967 - MIR3 SINE MIR -1 207 109 186 275 0 0 chr2 113860086 113860126 -136827728 + L3b LINE CR1 1532 1571 -12 236 240 167 60 chr2 113860157 113860307 -136827547 + L2 LINE L2 3148 3313 0 244 227 23 23 chr2 113861291 113861423 -136826431 + CT-rich Low_complexity Low_complexity 4 135 0 201 298 88 0 chr2 113861423 113861480 -136826374 - L2 LINE L2 -14 3258 3197 202 295 16 0 chr2 113861668 113861729 -136826125 - L2 LINE L2 -212 3060 2999 265 300 67 0 chr2 113862278 113862368 -136825486 + L2 LINE L2 3146 3241 -31 546 249 59 41 chr2 113863029 113863198 -136824656 - MIR SINE MIR -90 172 1 469 272 56 20 chr2 113863395 113863590 -136824264 - MIR SINE MIR -50 212 16 294 282 262 27 chr2 113863995 113864144 -136823710 + MIR SINE MIR 20 203 -59 288 226 140 0 chr2 113864167 113864260 -136823594 - L2 LINE L2 -19 3294 3189 387 287 52 29 chr2 113864784 113864920 -136822934 - MIR SINE MIR -40 222 84 441 0 0 0 chr2 113864968 113865017 -136822837 + (CA)n Simple_repeat Simple_repeat 1 49 0 315 339 0 40 chr2 113865248 113865479 -136822375 + CT-rich Low_complexity Low_complexity 1 221 0 274 294 0 43 chr2 113865468 113865631 -136822223 + C-rich Low_complexity Low_complexity 3 158 0 * 273 236 46 68 chr2 113866709 113866792 -136821062 - L1ME4a LINE L1 -177 5944 5861 2736 33 0 0 chr2 113866792 113867098 -136820756 - AluY SINE Alu -5 306 1 273 236 46 68 chr2 113867098 113867251 -136820603 - L1ME4a LINE L1 -260 5861 5713 2453 82 0 0 chr2 113867278 113867582 -136820272 - AluY SINE Alu -7 304 1 1775 181 63 26 chr2 113867610 113867992 -136819862 - MSTD LTR MaLR 0 396 1 316 313 17 26 chr2 113870393 113870508 -136817346 - L2 LINE L2 -17 3255 3142 195 326 98 33 chr2 113870836 113870928 -136816926 - MIR SINE MIR -88 120 23 357 285 117 0 chr2 113870942 113871079 -136816775 + Charlie1 DNA MER1_type 1 153 -2608 576 146 10 0 chr2 113871084 113871180 -136816674 + Charlie1 DNA MER1_type 2081 2177 -584 267 103 0 0 chr2 113871181 113871220 -136816634 + (TC)n Simple_repeat Simple_repeat 1 39 0 414 343 120 5 chr2 113871696 113871912 -136815942 + MIR SINE MIR 22 262 0 282 320 131 8 chr2 113872011 113872133 -136815721 - MER5A DNA MER1_type 0 189 53 198 71 0 0 chr2 113872271 113872299 -136815555 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 190 370 76 11 chr2 113872424 113872516 -136815338 + MIR SINE MIR 87 184 -78 195 133 0 89 chr2 113872608 113872653 -136815201 + L3 LINE CR1 1271 1311 -266 377 261 0 43 chr2 113874746 113874838 -136813016 - L2 LINE L2 0 3313 3226 453 244 67 0 chr2 113876003 113876122 -136811732 - MIR SINE MIR -11 251 125 566 304 30 0 chr2 113876452 113876620 -136811234 + MIR SINE MIR 84 256 -6 195 39 0 0 chr2 113876633 113876659 -136811195 - MIR SINE MIR -123 139 114 270 230 23 35 chr2 113879672 113879759 -136808095 + CT-rich Low_complexity Low_complexity 2 87 0 359 306 29 108 chr2 113879762 113880076 -136807778 - L2 LINE L2 -35 3237 2949 374 308 147 47 chr2 113880647 113881007 -136806847 - L3 LINE CR1 -3 1574 1179 21 0 0 0 chr2 113882836 113882857 -136804997 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr2 113883054 113883082 -136804772 + AT_rich Low_complexity Low_complexity 1 28 0 260 277 15 0 chr2 113883652 113883717 -136804137 + L2 LINE L2 3186 3251 -21 229 267 0 0 chr2 113883717 113883762 -136804092 + polypurine Low_complexity Low_complexity 1 45 0 258 352 121 15 chr2 113884022 113884221 -136803633 + MIR SINE MIR 34 253 -9 196 327 106 0 chr2 113885088 113885192 -136802662 - L2 LINE L2 -8 3305 3191 2129 123 0 0 chr2 113885439 113885741 -136802113 - AluSq SINE Alu -11 302 1 1010 290 62 22 chr2 113885944 113886043 -136801811 - L1M LINE L1 -743 5403 5309 186 43 0 0 chr2 113886043 113886066 -136801788 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1010 290 62 22 chr2 113886066 113886576 -136801278 - L1M LINE L1 -837 5309 4786 460 286 55 16 chr2 113886724 113886906 -136800948 + MIR SINE MIR 50 238 -24 648 0 0 0 chr2 113888023 113888095 -136799759 + (CA)n Simple_repeat Simple_repeat 1 72 0 477 360 71 29 chr2 113890150 113890461 -136797393 + L3 LINE CR1 1033 1356 -221 944 242 35 22 chr2 113890500 113890727 -136797127 + MIR SINE MIR 29 258 -4 528 16 0 0 chr2 113890750 113890811 -136797043 + (CAT)n Simple_repeat Simple_repeat 2 62 0 288 331 97 19 chr2 113890815 113890969 -136796885 + L3 LINE CR1 1387 1552 -25 2099 126 0 0 chr2 113891562 113891872 -136795982 + AluY SINE Alu 1 310 -1 1705 221 79 25 chr2 113892024 113892494 -136795360 - L1ME1 LINE L1 -5 6161 5667 243 305 119 89 chr2 113892558 113892827 -136795027 - L2 LINE L2 0 3272 2996 258 297 154 25 chr2 113893928 113894088 -136793766 + MIR SINE MIR 17 197 -65 2090 224 53 32 chr2 113894143 113894674 -136793180 - MLT1F LTR MaLR 0 542 1 183 286 0 0 chr2 113897124 113897166 -136790688 + L2 LINE L2 3266 3307 -6 251 257 0 9 chr2 113897422 113897535 -136790319 + (TA)n Simple_repeat Simple_repeat 2 113 0 206 128 26 0 chr2 113897574 113897613 -136790241 + (CATATA)n Simple_repeat Simple_repeat 5 44 0 311 132 0 38 chr2 113897616 113897669 -136790185 - L1MC4 LINE L1 -1339 6703 6653 304 247 75 0 chr2 113897827 113897920 -136789934 - MIR SINE MIR -147 115 16 877 239 52 0 chr2 113898419 113898632 -136789222 - MER58A DNA MER1_type 0 224 1 378 277 98 0 chr2 113898657 113898769 -136789085 - MIR3 SINE MIR -8 200 78 336 24 0 0 chr2 113899353 113899394 -136788460 + (TG)n Simple_repeat Simple_repeat 1 41 0 223 347 4 13 chr2 113900173 113900268 -136787586 + MIR SINE MIR 31 127 -81 1283 264 92 31 chr2 113900507 113901049 -136786805 - L1ME4a LINE L1 -2 6119 5545 536 341 143 26 chr2 113901125 113901588 -136786266 - L3 LINE CR1 -295 1282 766 442 291 43 0 chr2 113902257 113902398 -136785456 - MER115 DNA AcHobo -519 174 28 224 111 22 0 chr2 113903405 113903450 -136784404 + CT-rich Low_complexity Low_complexity 1 46 0 1560 163 17 20 chr2 113903450 113903744 -136784110 - AluJo SINE Alu -19 293 1 278 304 57 88 chr2 113903812 113903863 -136783991 - MIR3 SINE MIR -5 203 152 913 165 43 37 chr2 113903863 113904051 -136783803 + MER5A DNA MER1_type 1 189 0 278 304 57 88 chr2 113904051 113904193 -136783661 - MIR3 SINE MIR -56 152 16 282 316 10 0 chr2 113905559 113905657 -136782197 - MIR SINE MIR -72 136 38 266 250 50 12 chr2 113906862 113906942 -136780912 + MIR SINE MIR 81 163 -99 399 89 0 0 chr2 113906961 113907017 -136780837 + (CCA)n Simple_repeat Simple_repeat 3 58 0 773 313 44 4 chr2 113907034 113907261 -136780593 - MIR SINE MIR -19 243 8 512 289 139 12 chr2 113907867 113908040 -136779814 - MIR SINE MIR -67 195 1 1841 183 77 0 chr2 113908707 113909030 -136778824 - MLT1A1 LTR MaLR -17 348 1 476 330 100 16 chr2 113909040 113909349 -136778505 - L2 LINE L2 -511 2803 2469 222 37 0 0 chr2 113909496 113909523 -136778331 + (T)n Simple_repeat Simple_repeat 1 27 0 185 222 162 34 chr2 113910010 113910127 -136777727 - MIR SINE MIR -1 261 130 1731 125 38 21 chr2 113910484 113910773 -136777081 - AluSg1 SINE Alu -15 294 1 359 246 71 135 chr2 113911365 113911646 -136776208 - L2 LINE L2 -3 3310 3048 226 324 18 45 chr2 113911982 113912093 -136775761 - MER5A DNA MER1_type -8 181 74 * 557 272 0 87 chr2 113911996 113912103 -136775751 + MER5B DNA MER1_type 20 108 -70 2413 71 0 0 chr2 113912103 113912414 -136775440 - AluY SINE Alu 0 311 1 557 272 0 87 chr2 113912414 113912479 -136775375 + MER5B DNA MER1_type 108 177 -1 354 234 47 19 chr2 113913026 113913133 -136774721 - MLT1K LTR MaLR -21 567 458 421 236 24 39 chr2 113913135 113913262 -136774592 - MLT1K LTR MaLR -378 210 86 2378 106 17 28 chr2 113913479 113913838 -136774016 - THE1A LTR MaLR 0 355 1 12030 90 8 2 chr2 113913838 113915408 -136772446 - THE1A-int LTR MaLR 0 1580 1 2611 83 6 25 chr2 113915408 113915770 -136772084 - THE1A LTR MaLR 0 355 1 1252 165 49 15 chr2 113915977 113916978 -136770876 - L1MC1 LINE L1 0 6333 5184 2126 181 28 0 chr2 113917148 113917540 -136770314 - MER57A LTR ERV1 0 403 1 835 137 105 49 chr2 113917574 113917800 -136770054 - LTR54B LTR ERV1 -263 247 2 219 188 12 35 chr2 113918100 113918185 -136769669 + GA-rich Low_complexity Low_complexity 2 84 0 2212 102 0 0 chr2 113918897 113919200 -136768654 - AluSx SINE Alu -9 303 1 237 243 279 29 chr2 113919307 113919443 -136768411 + MER5B DNA MER1_type 4 173 -5 21 0 0 0 chr2 113919879 113919900 -136767954 + AT_rich Low_complexity Low_complexity 1 21 0 1725 75 51 28 chr2 113921213 113921516 -136766338 + AluY SINE Alu 23 331 0 1996 162 73 13 chr2 113921621 113922003 -136765851 + MSTA LTR MaLR 1 385 -41 2388 83 0 6 chr2 113922003 113922315 -136765539 - AluSg SINE Alu 0 310 1 1996 162 73 13 chr2 113922315 113922358 -136765496 + MSTA LTR MaLR 385 424 -2 455 273 50 54 chr2 113922852 113923297 -136764557 - L1MEc LINE L1 -5143 1065 660 321 278 9 28 chr2 113923534 113923642 -136764212 - L1MEc LINE L1 -6213 183 78 523 340 42 0 chr2 113923875 113924066 -136763788 + L3 LINE CR1 1015 1213 -364 826 187 132 62 chr2 113924379 113924636 -136763218 - ORSL DNA AcHobo 0 275 1 418 272 48 61 chr2 113924636 113925015 -136762839 - L1MC5 LINE L1 -285 7676 7303 324 248 64 55 chr2 113925224 113925333 -136762521 - L1MC5 LINE L1 -852 7109 7000 779 231 26 93 chr2 113925363 113925674 -136762180 + L1MC5 LINE L1 6624 6913 -1048 2077 131 0 0 chr2 113925698 113926010 -136761844 + AluSx SINE Alu 1 312 0 255 146 0 0 chr2 113926026 113926081 -136761773 + (A)n Simple_repeat Simple_repeat 1 55 0 210 258 0 0 chr2 113926118 113926207 -136761647 + GA-rich Low_complexity Low_complexity 2 90 0 926 284 43 36 chr2 113926215 113926702 -136761152 - L1MC5 LINE L1 -745 5401 5127 2812 196 19 65 chr2 113926805 113927449 -136760405 + MER90 LTR ERV1 1 614 0 1363 170 43 119 chr2 113928453 113928847 -136759007 - MLT1A1 LTR MaLR -1 364 1 285 276 90 83 chr2 113929199 113929344 -136758510 - L2 LINE L2 -2 3270 3125 237 327 78 26 chr2 113929780 113929933 -136757921 + L3 LINE CR1 1300 1460 -117 2142 105 7 3 chr2 113929959 113930254 -136757600 + AluSg SINE Alu 1 296 -14 555 288 17 28 chr2 113931170 113931347 -136756507 - MIR3 SINE MIR -23 185 11 2303 74 3 7 chr2 113931468 113931764 -136756090 + AluSc SINE Alu 1 295 -14 9290 30 1 1 chr2 113932085 113933897 -136753957 - L1PA3 LINE L1 -4 6151 4340 536 16 0 0 chr2 113934425 113934488 -136753366 + SVA Other Other 393 455 -931 7443 100 36 0 chr2 113934589 113935618 -136752236 - THE1B-int LTR MaLR -514 1066 1 2332 119 76 15 chr2 113935618 113935961 -136751893 - THE1B LTR MaLR 0 364 1 203 86 0 29 chr2 113936223 113936258 -136751596 + (TA)n Simple_repeat Simple_repeat 2 35 0 26 0 0 0 chr2 113936420 113936446 -136751408 + AT_rich Low_complexity Low_complexity 1 26 0 445 245 110 38 chr2 113936446 113936683 -136751171 + L1ME LINE L1 5546 5799 -322 2638 201 80 11 chr2 113937655 113938291 -136749563 - L1MC4a LINE L1 -3 7805 7126 590 303 91 5 chr2 113938306 113938504 -136749350 - L1ME1 LINE L1 -5 6161 5947 186 121 35 35 chr2 113938883 113938941 -136748913 + T-rich Low_complexity Low_complexity 4 61 0 438 252 67 118 chr2 113939090 113939328 -136748526 + MER102b DNA MER1_type 107 332 -9 34 0 0 0 chr2 113939334 113939368 -136748486 + AT_rich Low_complexity Low_complexity 1 34 0 1703 241 61 51 chr2 113939672 113940281 -136747573 - HAL1 LINE L1 -296 2211 1597 344 260 26 12 chr2 113940288 113940391 -136747463 - MLT1I LTR MaLR -5 445 324 2285 116 0 0 chr2 113940667 113940977 -136746877 - AluSg SINE Alu 0 310 1 1015 91 8 0 chr2 113940977 113941109 -136746745 - AluSg SINE Alu -177 133 1 3604 255 72 65 chr2 113941109 113941270 -136746584 - HAL1 LINE L1 -935 1572 1414 2200 163 10 52 chr2 113941270 113941675 -136746179 + MLT1B LTR MaLR 3 390 0 3604 255 72 65 chr2 113941675 113942157 -136745697 - HAL1 LINE L1 -1093 1414 937 4960 105 24 15 chr2 113942157 113942210 -136745644 - L1MA3 LINE L1 -1 6304 6253 2416 70 10 0 chr2 113942210 113942508 -136745346 - AluSp SINE Alu -11 302 2 4960 105 24 15 chr2 113942508 113943197 -136744657 - L1MA3 LINE L1 -52 6253 5555 3604 255 72 65 chr2 113943197 113944112 -136743742 - HAL1 LINE L1 -1570 937 1 612 266 42 77 chr2 113944474 113944566 -136743288 - MIR SINE MIR -12 250 156 2338 74 0 0 chr2 113944566 113944870 -136742984 + AluSx SINE Alu 1 304 0 612 266 42 77 chr2 113944870 113945035 -136742819 - MIR SINE MIR -106 156 1 557 257 40 14 chr2 113945370 113945518 -136742336 + L2 LINE L2 3121 3272 0 2447 182 24 2 chr2 113945547 113945964 -136741890 + MSTB LTR MaLR 1 426 0 2257 84 125 12 chr2 113945972 113946307 -136741547 - THE1C LTR MaLR -2 373 1 1099 230 149 9 chr2 113947118 113947440 -136740414 + L1ME3A LINE L1 5781 6147 -23 1034 217 39 60 chr2 113948877 113949158 -136738696 - LTR16C LTR ERVL -1 490 216 232 26 26 26 chr2 113949625 113949663 -136738191 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 233 362 38 79 chr2 113950616 113950881 -136736973 + L2 LINE L2 2994 3247 -25 2885 117 45 12 chr2 113951130 113951548 -136736306 - MSTB1 LTR MaLR 0 432 1 765 316 49 11 chr2 113951831 113952303 -136735551 - L1MEc LINE L1 -4598 1798 1309 437 292 117 47 chr2 113954125 113954616 -136733238 - L2 LINE L2 -25 3288 2764 817 220 84 16 chr2 113957179 113957448 -136730406 - LTR48B LTR ERV1 -5 782 360 2438 62 7 0 chr2 113957536 113957841 -136730013 - AluY SINE Alu -4 307 1 568 226 16 8 chr2 113958239 113958363 -136729491 + MSTD LTR MaLR 15 139 -257 26 30 0 0 chr2 113958682 113958715 -136729139 + AT_rich Low_complexity Low_complexity 1 33 0 7922 35 3 0 chr2 113958715 113960070 -136727784 - L1PA5 LINE L1 -8 6146 4788 6852 38 0 0 chr2 113960070 113960871 -136726983 + L1PA5 LINE L1 3977 4777 -1369 2161 153 93 0 chr2 113960872 113961271 -136726583 + Tigger1 DNA MER2_type 1983 2418 0 7578 254 47 21 chr2 113961271 113961908 -136725946 + L1M3b LINE L1 2273 2892 -4673 180 111 0 0 chr2 113961908 113961935 -136725919 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7578 254 47 21 chr2 113961935 113961960 -136725894 + L1M3b LINE L1 2892 2915 -4650 1989 117 0 58 chr2 113961960 113962269 -136725585 + AluSg SINE Alu 1 291 -19 7578 254 47 21 chr2 113962269 113964205 -136723649 + L1M3b LINE L1 2915 4977 -2588 2279 111 0 3 chr2 113964205 113964503 -136723351 - AluSq SINE Alu -16 297 1 7578 254 47 21 chr2 113964503 113966071 -136721783 + L1M3b LINE L1 4977 6503 -1062 5703 44 0 11 chr2 113966088 113966753 -136721101 - SVA Other Other 0 1386 729 9476 91 28 18 chr2 113966865 113968169 -136719685 + THE1B-int LTR MaLR 264 1580 0 2190 108 142 16 chr2 113968169 113968492 -136719362 + THE1B LTR MaLR 1 364 0 24 32 0 0 chr2 113968593 113968624 -136719230 + AT_rich Low_complexity Low_complexity 1 31 0 2071 152 0 3 chr2 113968808 113969117 -136718737 - AluSx SINE Alu -4 308 1 22 35 0 0 chr2 113969402 113969431 -136718423 + AT_rich Low_complexity Low_complexity 1 29 0 2083 131 0 3 chr2 113969711 113970008 -136717846 + AluSq SINE Alu 1 296 -17 1425 130 10 0 chr2 113970272 113970479 -136717375 + AluSq SINE Alu 86 294 -19 254 177 0 16 chr2 113970946 113971008 -136716846 + (TA)n Simple_repeat Simple_repeat 2 62 0 1761 177 0 0 chr2 113971016 113971298 -136716556 - AluJo SINE Alu -30 282 1 810 211 28 22 chr2 113971437 113971617 -136716237 + MLT1A1 LTR MaLR 185 365 0 24 0 0 0 chr2 113972484 113972508 -136715346 + AT_rich Low_complexity Low_complexity 1 24 0 412 208 67 60 chr2 113973181 113973293 -136714561 + MER58 DNA MER1_type 32 144 -2276 1012 152 55 92 chr2 113973293 113973604 -136714250 - MER57A LTR ERV1 0 403 1 432 172 0 133 chr2 113973605 113973733 -136714121 - MER57A-int LTR ERV1 -2 7535 7425 885 198 102 63 chr2 113973733 113973825 -136714029 - LTR54B LTR ERV1 -121 377 290 1917 139 4 0 chr2 113973825 113974091 -136713763 - AluSx SINE Alu -45 267 1 885 198 102 63 chr2 113974091 113974361 -136713493 - LTR54B LTR ERV1 -208 290 1 603 189 25 16 chr2 113974382 113974504 -136713350 + MER58 DNA MER1_type 2294 2416 -4 741 269 54 22 chr2 113974507 113974730 -136713124 + MIR SINE MIR 15 244 -18 2284 111 3 0 chr2 113974942 113975249 -136712605 + AluSg SINE Alu 1 308 -2 2304 146 53 44 chr2 113975512 113975963 -136711891 - L1MB8 LINE L1 -9 6169 5715 1231 172 0 19 chr2 113976078 113976287 -136711567 + AluJo SINE Alu 82 286 -26 191 106 21 106 chr2 113976944 113976991 -136710863 + MIR SINE MIR 84 126 -136 1050 258 111 12 chr2 113977023 113977441 -136710413 + L1ME LINE L1 5357 5815 -347 21 57 0 0 chr2 113977876 113977911 -136709943 + AT_rich Low_complexity Low_complexity 1 35 0 189 284 25 12 chr2 113978864 113978945 -136708909 + MIR SINE MIR 70 151 -111 339 314 133 43 chr2 113979981 113980236 -136707618 + L2 LINE L2 2562 2839 -475 2866 3 0 0 chr2 113980450 113980759 -136707095 - AluYa5 SINE Alu -2 309 1 233 288 137 0 chr2 113980772 113980845 -136707009 + L2 LINE L2 3199 3281 -32 360 214 92 77 chr2 113981161 113981357 -136706497 + L1ME LINE L1 5611 5809 -361 21 0 0 0 chr2 113981718 113981739 -136706115 + AT_rich Low_complexity Low_complexity 1 21 0 26 64 0 0 chr2 113981878 113981925 -136705929 + AT_rich Low_complexity Low_complexity 1 47 0 2278 104 0 3 chr2 113982305 113982614 -136705240 - AluSc SINE Alu -1 308 1 2027 78 0 0 chr2 113983548 113983803 -136704051 - AluY SINE Alu -16 295 41 299 189 68 14 chr2 113984846 113984920 -136702934 + L2 LINE L2 3232 3309 -4 1505 140 4 0 chr2 113985946 113986174 -136701680 + MER2 DNA MER2_type 1 229 -116 21 0 0 0 chr2 113986368 113986389 -136701465 + AT_rich Low_complexity Low_complexity 1 21 0 1898 131 4 4 chr2 113987040 113987315 -136700539 + AluSx SINE Alu 1 275 -37 531 118 0 0 chr2 113987319 113987404 -136700450 + (CA)n Simple_repeat Simple_repeat 2 86 0 469 103 0 15 chr2 113987561 113987629 -136700225 - LTR59 LTR ERV1 -530 67 1 510 266 21 16 chr2 113987838 113988026 -136699828 - L1MC/D LINE L1 -2020 5765 5577 2651 171 60 11 chr2 113988031 113988581 -136699273 - MER34C LTR ERV1 -2 583 7 1163 229 82 20 chr2 113988592 113989203 -136698651 - L1MC/D LINE L1 -745 5401 4898 512 217 9 0 chr2 113989219 113989325 -136698529 + LTR60 LTR ERV1 1 107 -479 2550 46 0 3 chr2 113989436 113989738 -136698116 + AluY SINE Alu 5 305 -6 243 0 0 0 chr2 113990975 113991002 -136696852 + (T)n Simple_repeat Simple_repeat 1 27 0 2602 55 0 0 chr2 113992011 113992319 -136695535 + AluY SINE Alu 1 308 -3 23 33 0 0 chr2 113992369 113992399 -136695455 + AT_rich Low_complexity Low_complexity 1 30 0 206 262 206 40 chr2 113992697 113992823 -136695031 - L2 LINE L2 -4 3268 3122 230 320 39 62 chr2 113992910 113993038 -136694816 - L2 LINE L2 -200 3072 2948 2622 133 88 11 chr2 113994676 113995129 -136692725 + MER50 LTR ERV1 7 494 -240 1902 132 0 0 chr2 113995133 113995391 -136692463 + AluSq SINE Alu 1 258 -55 709 257 47 20 chr2 113995578 113995809 -136692045 - MIR SINE MIR -17 245 13 988 139 0 0 chr2 113996826 113996963 -136690891 - AluSq SINE Alu -93 220 84 210 37 0 0 chr2 113997044 113997071 -136690783 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1825 136 11 0 chr2 113997075 113997347 -136690507 - AluSx SINE Alu -37 275 1 1181 215 160 0 chr2 113997349 113997656 -136690198 - MSTD LTR MaLR -6 390 35 276 73 98 0 chr2 113997689 113997730 -136690124 - MSTD LTR MaLR -383 45 1 612 162 35 131 chr2 113997732 113997869 -136689985 - MSTD-int LTR MaLR -5 1730 1616 1698 164 7 3 chr2 113997869 113998156 -136689698 + AluJb SINE Alu 1 288 -24 612 162 35 131 chr2 113998156 113998216 -136689638 - MSTD-int LTR MaLR -119 1616 1552 2246 79 3 3 chr2 113998350 113998640 -136689214 + AluY SINE Alu 1 290 -21 334 304 108 42 chr2 113998657 113998897 -136688957 + HAL1 LINE L1 1198 1453 -1054 * 2898 128 51 98 chr2 113998888 113999521 -136688333 + L1MB2 LINE L1 5565 6167 -4 740 228 99 47 chr2 114000256 114000489 -136687365 - MIR SINE MIR -13 249 5 209 257 20 40 chr2 114001671 114001772 -136686082 + (TATG)n Simple_repeat Simple_repeat 1 99 0 11465 95 36 17 chr2 114002406 114003559 -136684295 - Tigger1 DNA MER2_type -286 2132 934 2002 110 4 4 chr2 114003559 114003869 -136683985 + AluSg SINE Alu 1 310 0 11465 95 36 17 chr2 114003869 114004427 -136683427 - Tigger1 DNA MER2_type -1484 934 388 775 234 101 54 chr2 114004430 114004746 -136683108 - HAL1b LINE L1 -579 769 439 713 247 144 78 chr2 114004745 114005272 -136682582 - HAL1b LINE L1 -710 638 77 * 189 132 0 0 chr2 114006301 114006339 -136681515 + (TTTTTA)n Simple_repeat Simple_repeat 5 42 0 1246 164 28 5 chr2 114006373 114006587 -136681267 - MER20 DNA MER1_type 0 219 1 2230 107 0 28 chr2 114008169 114008488 -136679366 - AluSx SINE Alu -2 310 1 31 44 0 0 chr2 114009402 114009447 -136678407 + AT_rich Low_complexity Low_complexity 1 45 0 809 56 47 0 chr2 114010132 114010239 -136677615 + L1PA10 LINE L1 6054 6165 -3 287 57 0 0 chr2 114010312 114010347 -136677507 + U2 snRNA snRNA 1 35 -153 2260 98 10 0 chr2 114010658 114010953 -136676901 - AluSx SINE Alu -14 298 1 202 151 0 75 chr2 114012426 114012479 -136675375 + CT-rich Low_complexity Low_complexity 4 52 0 1357 115 126 11 chr2 114012568 114012838 -136675016 - L1MA9 LINE L1 -5 6307 6007 27 0 0 0 chr2 114013013 114013040 -136674814 + AT_rich Low_complexity Low_complexity 1 27 0 290 164 91 0 chr2 114013904 114013959 -136673895 - L2 LINE L2 -4 3309 3250 41 21 0 0 chr2 114015959 114016007 -136671847 + AT_rich Low_complexity Low_complexity 1 48 0 1939 64 42 116 chr2 114016007 114016318 -136671536 - AluSx SINE Alu -24 288 1 793 176 0 0 chr2 114016708 114016833 -136671021 - FLAM_A SINE Alu -8 125 1 26 0 0 0 chr2 114017837 114017863 -136669991 + AT_rich Low_complexity Low_complexity 1 26 0 588 246 181 0 chr2 114018533 114018748 -136669106 + MIR SINE MIR 9 262 0 234 0 0 0 chr2 114020680 114020706 -136667148 + (T)n Simple_repeat Simple_repeat 1 26 0 2602 55 0 0 chr2 114021718 114022026 -136665828 + AluY SINE Alu 1 308 -3 23 33 0 0 chr2 114022076 114022106 -136665748 + AT_rich Low_complexity Low_complexity 1 30 0 206 262 206 40 chr2 114022404 114022530 -136665324 - L2 LINE L2 -4 3268 3122 230 320 39 62 chr2 114022617 114022745 -136665109 - L2 LINE L2 -200 3072 2948 181 336 144 8 chr2 114022811 114022936 -136664918 - L2 LINE L2 -456 2858 2717 1761 124 65 10 chr2 114024068 114024359 -136663495 - AluSx SINE Alu -1 311 5 2235 85 10 20 chr2 114024926 114025231 -136662623 - AluSc SINE Alu -7 302 1 25 0 0 0 chr2 114026373 114026398 -136661456 + AT_rich Low_complexity Low_complexity 1 25 0 34460 33 16 5 chr2 114026419 114032483 -136655371 - L1PA3 LINE L1 0 6155 1 2784 143 17 2 chr2 114032593 114033060 -136654794 - L1MB1 LINE L1 0 6168 5695 1870 169 10 16 chr2 114033204 114033518 -136654336 - AluJo SINE Alu 0 312 1 182 91 30 0 chr2 114033727 114033760 -136654094 + GA-rich Low_complexity Low_complexity 3 36 0 1680 199 7 3 chr2 114034751 114035058 -136652796 - AluJb SINE Alu -4 308 1 1673 157 16 38 chr2 114035063 114035381 -136652473 - AluJo SINE Alu 0 312 2 180 0 0 0 chr2 114036023 114036043 -136651811 + (T)n Simple_repeat Simple_repeat 1 20 0 381 250 30 54 chr2 114038504 114038672 -136649182 - L1MC5 LINE L1 -25 7936 7773 1018 222 117 69 chr2 114038963 114039400 -136648454 - MER39 LTR ERV1 0 707 250 247 273 34 34 chr2 114039377 114039465 -136648389 - LTR48B LTR ERV1 -556 88 1 * 2039 109 28 62 chr2 114039580 114039902 -136647952 - AluSx SINE Alu -1 311 1 361 297 72 0 chr2 114039959 114040070 -136647784 - L1ME3 LINE L1 -79 6083 5965 1829 179 0 7 chr2 114041408 114041699 -136646155 + AluJb SINE Alu 1 289 -23 21 82 0 0 chr2 114041962 114042011 -136645843 + AT_rich Low_complexity Low_complexity 1 49 0 331 153 333 0 chr2 114042015 114042087 -136645767 + Tigger3(Golem) DNA MER2_type 2 97 -2932 * 1272 130 10 24 chr2 114042085 114042292 -136645562 + Tigger3(Golem) DNA MER2_type 2801 3004 -25 2563 143 22 9 chr2 114042304 114042753 -136645101 - L1MB1 LINE L1 0 6168 5714 9380 165 49 5 chr2 114042930 114046111 -136641743 + L1PB1 LINE L1 1093 4557 -2305 6539 124 18 6 chr2 114046117 114047580 -136640274 + L1PB1 LINE L1 5392 6867 0 235 324 73 29 chr2 114048205 114048341 -136639513 + MIR SINE MIR 86 227 -35 600 150 107 43 chr2 114051052 114051192 -136636662 - L1MC3 LINE L1 -448 7337 7189 237 279 0 0 chr2 114051192 114051253 -136636601 - MLT1F1 LTR MaLR -443 124 64 1156 166 87 8 chr2 114051260 114051501 -136636353 - L1MC3 LINE L1 -666 7119 6860 237 128 0 43 chr2 114051503 114051550 -136636304 - L1MC3 LINE L1 -881 6904 6860 22 35 0 0 chr2 114052296 114052325 -136635529 + AT_rich Low_complexity Low_complexity 1 29 0 2555 55 7 3 chr2 114052572 114052882 -136634972 + AluY SINE Alu 1 311 0 757 122 52 0 chr2 114052899 114053014 -136634840 + FLAM_A SINE Alu 1 121 -12 370 219 219 28 chr2 114053115 114053330 -136634524 - MER112 DNA MER1_type 0 256 1 192 163 0 0 chr2 114054286 114054329 -136633525 + GA-rich Low_complexity Low_complexity 2 44 0 237 108 0 0 chr2 114056438 114056475 -136631379 + (TA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 114058718 114058739 -136629115 + GC_rich Low_complexity Low_complexity 1 21 0 695 245 67 62 chr2 114060152 114060284 -136627570 - L1MC5 LINE L1 -135 7826 7696 763 175 0 0 chr2 114060284 114060410 -136627444 + FLAM_C SINE Alu 1 126 -7 695 245 67 62 chr2 114060410 114060693 -136627161 - L1MC5 LINE L1 -265 7696 7409 28 29 0 0 chr2 114061922 114061957 -136625897 + AT_rich Low_complexity Low_complexity 1 35 0 894 269 0 0 chr2 114062078 114062290 -136625564 + MIR SINE MIR 51 262 0 419 316 54 34 chr2 114062744 114063041 -136624813 - L2 LINE L2 -1 3271 2969 2405 176 98 15 chr2 114063245 114064861 -136622993 - SATR1 Satellite Satellite 0 1750 1 2254 182 119 1 chr2 114064894 114065635 -136622219 - SATR1 Satellite Satellite 0 828 1 21 71 0 0 chr2 114065635 114065677 -136622177 + AT_rich Low_complexity Low_complexity 1 42 0 237 254 6 50 chr2 114065729 114065910 -136621944 + (TAA)n Simple_repeat Simple_repeat 1 173 0 1902 208 112 50 chr2 114066029 114067126 -136620728 + SATR1 Satellite Satellite 1 1164 -131 1923 133 30 3 chr2 114067170 114067471 -136620383 - AluSc SINE Alu 0 309 1 1477 258 9 58 chr2 114067472 114067921 -136619933 - L1MEc LINE L1 -5932 464 38 653 218 13 77 chr2 114067922 114068156 -136619698 + MER20B DNA MER1_type 563 781 -2 658 197 16 0 chr2 114068168 114068290 -136619564 + MER94 DNA DNA 1 124 -10 954 238 5 0 chr2 114068767 114068981 -136618873 - MIR SINE MIR 0 262 48 375 304 75 53 chr2 114069301 114069699 -136618155 - L2 LINE L2 -841 2473 2067 1783 194 81 42 chr2 114069846 114070280 -136617574 - MLT1C LTR MaLR -9 458 8 1034 161 16 115 chr2 114071659 114071740 -136616114 + MER20 DNA MER1_type 1 88 -131 1664 137 7 4 chr2 114071740 114072010 -136615844 - L1MB3 LINE L1 -7 6176 5906 1034 161 16 115 chr2 114072010 114072171 -136615683 + MER20 DNA MER1_type 88 219 0 559 253 47 25 chr2 114072208 114072515 -136615339 - MLT1I LTR MaLR -1 408 61 207 88 0 0 chr2 114072634 114072668 -136615186 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1790 146 4 8 chr2 114072691 114072959 -136614895 - AluJb SINE Alu -45 267 1 331 255 80 43 chr2 114073385 114073573 -136614281 + MER117 DNA MER1_type 2 196 -1 613 120 0 2 chr2 114073764 114074023 -136613831 + AluSx SINE Alu 1 308 0 451 263 8 0 chr2 114074029 114074147 -136613707 - L2 LINE L2 -15 3298 3180 1050 241 119 24 chr2 114074390 114074767 -136613087 + L2 LINE L2 2896 3308 -5 1434 131 68 0 chr2 114075235 114075456 -136612398 + AluJb SINE Alu 67 302 -10 256 268 0 14 chr2 114075459 114075530 -136612324 - MIR3 SINE MIR -27 181 112 299 261 134 15 chr2 114076217 114076351 -136611503 + MIR SINE MIR 110 259 -3 1859 140 23 32 chr2 114077299 114077607 -136610247 - AluJb SINE Alu -7 305 1 2438 150 25 10 chr2 114078225 114078624 -136609230 + MER65A LTR ERV1 41 445 0 848 228 22 0 chr2 114078784 114078964 -136608890 + MER5A DNA MER1_type 5 188 -1 207 0 0 0 chr2 114079028 114079051 -136608803 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1148 158 62 34 chr2 114079084 114079293 -136608561 - AluJb SINE Alu -97 215 1 643 239 7 7 chr2 114079311 114079453 -136608401 + MER5B DNA MER1_type 37 178 0 565 207 173 0 chr2 114079467 114079617 -136608237 - MER5A DNA MER1_type -6 183 8 205 266 31 117 chr2 114079631 114079759 -136608095 + MIR3 SINE MIR 15 131 -77 622 228 49 5 chr2 114079898 114080082 -136607772 - MER113 DNA MER1_type? -329 192 1 287 276 62 41 chr2 114080929 114081074 -136606780 + MIR3 SINE MIR 60 207 -1 2078 125 0 0 chr2 114081493 114081781 -136606073 - AluSx SINE Alu -24 288 1 252 0 0 0 chr2 114082916 114082944 -136604910 + (A)n Simple_repeat Simple_repeat 1 28 0 285 29 0 0 chr2 114083078 114083112 -136604742 + (TATG)n Simple_repeat Simple_repeat 1 34 0 4688 170 57 48 chr2 114084564 114084648 -136603206 - L1 LINE L1 -1828 4318 4236 1186 134 5 58 chr2 114084648 114084872 -136602982 - L1PA16 LINE L1 0 6166 5955 4688 170 57 48 chr2 114084872 114085810 -136602044 - L1 LINE L1 -1910 4236 3287 394 301 21 49 chr2 114086524 114086632 -136601222 + MIR SINE MIR 43 148 -114 2278 140 54 11 chr2 114086632 114086983 -136600871 + MER47A DNA MER2_type 1 366 0 394 301 21 49 chr2 114086983 114087017 -136600837 + MIR SINE MIR 148 181 -81 198 325 26 0 chr2 114087300 114087377 -136600477 - MIR SINE MIR -26 236 158 438 304 8 0 chr2 114087546 114087671 -136600183 + MER94 DNA DNA 3 128 -6 292 232 105 32 chr2 114087979 114088074 -136599780 - LTR67 LTR ERVL 0 557 456 2563 194 93 0 chr2 114088503 114089018 -136598836 - MER99 DNA DNA 0 828 266 514 250 18 0 chr2 114089356 114089468 -136598386 - MER99 DNA DNA -714 114 1 883 125 0 29 chr2 114090817 114090953 -136596901 + FLAM_C SINE Alu 1 132 -1 218 268 0 0 chr2 114091184 114091255 -136596599 + (TAA)n Simple_repeat Simple_repeat 3 73 0 739 265 30 10 chr2 114091261 114091461 -136596393 - MIR SINE MIR 0 262 59 322 234 0 0 chr2 114092025 114092089 -136595765 + MIR SINE MIR 80 143 -119 229 244 47 0 chr2 114092089 114092175 -136595679 + L1MC4 LINE L1 6614 6703 -1339 573 138 145 14 chr2 114092449 114092587 -136595267 + MER103 DNA DNA 3 158 -8 444 117 0 0 chr2 114093036 114093096 -136594758 + Alu SINE Alu 239 298 -13 336 258 75 0 chr2 114093117 114093210 -136594644 + MER103 DNA DNA 67 166 0 479 171 163 8 chr2 114093609 114093732 -136594122 - MIR SINE MIR -3 259 118 1429 153 99 0 chr2 114094518 114094760 -136593094 + AluJb SINE Alu 1 266 -46 189 0 0 0 chr2 114094807 114094828 -136593026 + (A)n Simple_repeat Simple_repeat 1 21 0 1746 147 29 13 chr2 114094868 114095181 -136592673 - L1MA7 LINE L1 -8 6283 5966 237 33 0 0 chr2 114096203 114096233 -136591621 + (CA)n Simple_repeat Simple_repeat 2 31 0 23 0 0 0 chr2 114097180 114097203 -136590651 + GC_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr2 114097673 114097699 -136590155 + (CA)n Simple_repeat Simple_repeat 2 27 0 1479 189 42 23 chr2 114099558 114099864 -136587990 - AluJb SINE Alu 0 312 1 72 58 0 0 chr2 114100015 114100136 -136587718 + AT_rich Low_complexity Low_complexity 1 121 0 25 0 0 0 chr2 114100304 114100329 -136587525 + AT_rich Low_complexity Low_complexity 1 25 0 415 261 90 68 chr2 114100431 114100661 -136587193 - L1MC4 LINE L1 -89 7953 7730 1617 155 12 8 chr2 114100661 114100913 -136586941 - AluJo SINE Alu -19 293 41 415 261 90 68 chr2 114100913 114101180 -136586674 - L1MC4 LINE L1 -312 7730 7333 1947 201 3 3 chr2 114101181 114101540 -136586314 - MLT1A1 LTR MaLR -6 359 1 256 264 42 0 chr2 114101540 114101612 -136586242 - L1MC5 LINE L1 -630 7331 7257 * 571 267 50 34 chr2 114101589 114102045 -136585809 - L1MC4 LINE L1 -626 7416 6960 2271 119 0 3 chr2 114102587 114102898 -136584956 - AluSx SINE Alu -2 310 1 1163 142 34 39 chr2 114102949 114103154 -136584700 + MER3 DNA MER1_type 2 205 -4 328 167 0 45 chr2 114103417 114103483 -136584371 - MER4B LTR ERV1 -547 63 1 30 0 0 0 chr2 114105415 114105445 -136582409 + AT_rich Low_complexity Low_complexity 1 30 0 730 251 145 43 chr2 114105675 114106274 -136581580 + L1ME4a LINE L1 5362 6024 -97 490 257 13 59 chr2 114106396 114106548 -136581306 + MIR SINE MIR 46 190 -72 207 184 0 0 chr2 114106824 114106862 -136580992 + (CA)n Simple_repeat Simple_repeat 2 39 0 1771 174 7 7 chr2 114108371 114108676 -136579178 - AluJo SINE Alu -7 305 1 338 200 38 0 chr2 114108777 114108857 -136578997 + L1ME4a LINE L1 5774 5856 -265 183 374 60 0 chr2 114111391 114111474 -136576380 - MIR3 SINE MIR -34 174 87 859 267 68 11 chr2 114111655 114111921 -136575933 + MLT1C LTR MaLR 187 467 0 937 239 42 11 chr2 114111945 114112205 -136575649 - MLT1C LTR MaLR 0 467 200 1521 156 8 0 chr2 114112205 114112442 -136575412 - ERVL LTR ERVL -1363 4401 4163 2557 167 15 0 chr2 114112444 114112863 -136574991 - MSTB LTR MaLR -1 413 1 883 156 56 12 chr2 114112863 114113023 -136574831 - ERVL LTR ERVL -1598 4166 4000 578 281 64 100 chr2 114113486 114113877 -136573977 - MLT1J2 LTR MaLR -15 435 59 207 316 53 0 chr2 114114058 114114153 -136573701 + L2 LINE L2 3208 3307 -6 247 313 48 0 chr2 114114235 114114318 -136573536 + L2 LINE L2 2395 2481 -833 331 135 0 0 chr2 114114327 114114379 -136573475 - MLT1F LTR MaLR -1 541 490 457 107 13 0 chr2 114114384 114114459 -136573395 - MLT1F LTR MaLR -185 357 282 418 239 187 0 chr2 114114547 114114702 -136573152 - L2 LINE L2 0 3313 3130 1796 232 60 0 chr2 114114707 114115154 -136572700 - MLT1F LTR MaLR -58 509 1 368 318 75 30 chr2 114115158 114115359 -136572495 + L2 LINE L2 2479 2688 -626 1050 264 94 39 chr2 114115383 114115976 -136571878 - L2 LINE L2 0 3313 2681 270 292 0 14 chr2 114116000 114116072 -136571782 + L2 LINE L2 2716 2786 -528 27 0 0 0 chr2 114116076 114116103 -136571751 + AT_rich Low_complexity Low_complexity 1 27 0 441 0 0 0 chr2 114116282 114116331 -136571523 + (TG)n Simple_repeat Simple_repeat 2 50 0 237 184 0 0 chr2 114116528 114116577 -136571277 - MER5A DNA MER1_type -80 109 61 847 86 40 23 chr2 114116584 114116759 -136571095 + CT-rich Low_complexity Low_complexity 1 178 0 1939 145 3 0 chr2 114116759 114117092 -136570762 - AluSx SINE Alu 0 334 1 243 196 0 0 chr2 114117097 114117143 -136570711 - MER5A DNA MER1_type -118 71 26 735 255 12 0 chr2 114117173 114117334 -136570520 - MER5B DNA MER1_type -14 164 2 217 243 61 89 chr2 114118342 114118456 -136569398 - MIR SINE MIR -89 119 6 240 325 12 0 chr2 114118543 114118623 -136569231 - MIR SINE MIR -61 147 67 478 273 74 42 chr2 114118842 114119153 -136568701 - L1MC5 LINE L1 -140 7821 7501 5457 219 19 12 chr2 114119331 114120748 -136567106 + L1PBa LINE L1 2713 4134 -2728 1905 169 13 0 chr2 114121078 114121379 -136566475 - AluJb SINE Alu -7 305 1 291 386 31 8 chr2 114121542 114121669 -136566185 - L2 LINE L2 -2 3270 3141 196 154 154 19 chr2 114121959 114122011 -136565843 - L2 LINE L2 0 3272 3214 1739 240 91 14 chr2 114122011 114122516 -136565338 + MER45B DNA AcHobo 1 544 -496 416 198 62 0 chr2 114122516 114122597 -136565257 + 5S rRNA rRNA 3 88 -33 2385 194 25 21 chr2 114122598 114122913 -136564941 + MER45B DNA AcHobo 528 840 -741 200 35 35 0 chr2 114122913 114122942 -136564912 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 2049 111 0 4 chr2 114122942 114123221 -136564633 - AluSg SINE Alu -32 278 1 2385 194 25 21 chr2 114123221 114123415 -136564439 + MER45B DNA AcHobo 839 1040 0 668 303 91 29 chr2 114123440 114123747 -136564107 - L2 LINE L2 -78 3194 2869 565 310 57 63 chr2 114123797 114123925 -136563929 - L2 LINE L2 -556 2758 2631 2166 128 13 0 chr2 114123925 114124231 -136563623 + AluSx SINE Alu 1 310 -2 565 310 57 63 chr2 114124231 114124609 -136563245 - L2 LINE L2 -683 2631 2255 3037 219 77 22 chr2 114124610 114125445 -136562409 + L1ME1 LINE L1 5293 6164 -2 530 246 22 22 chr2 114125516 114125650 -136562204 - MIR SINE MIR -109 153 20 1131 159 5 0 chr2 114126197 114126392 -136561462 + L1P LINE L1 4962 5157 -989 772 97 19 0 chr2 114126392 114126493 -136561361 + L1PA10 LINE L1 6064 6168 0 203 276 60 26 chr2 114126970 114127086 -136560768 + MIR SINE MIR 30 149 -59 244 216 257 0 chr2 114127389 114127463 -136560391 - L2 LINE L2 0 3313 3221 1281 204 0 29 chr2 114127485 114127765 -136560089 + AluJb SINE Alu 40 311 -1 625 315 34 29 chr2 114127771 114128083 -136559771 - L2 LINE L2 -208 3105 2793 1559 232 127 29 chr2 114128096 114128466 -136559388 - MLT1E LTR MaLR -14 579 140 2173 133 0 0 chr2 114128466 114128767 -136559087 - AluSx SINE Alu -11 301 1 1559 232 127 29 chr2 114128767 114128922 -136558932 - MLT1E LTR MaLR -453 140 2 497 276 136 94 chr2 114128926 114129575 -136558279 - MLT1E-int LTR MaLR 0 1371 696 1259 240 31 31 chr2 114129776 114130135 -136557719 - MLT1E-int LTR MaLR -765 606 248 588 173 75 8 chr2 114130199 114130332 -136557522 - L2 LINE L2 -573 2741 2600 242 341 54 16 chr2 114130528 114130657 -136557197 - L2 LINE L2 0 3272 3139 1586 189 36 26 chr2 114130958 114131344 -136556510 - Charlie5 DNA MER1_type 0 2623 2234 951 161 0 0 chr2 114132890 114133033 -136554821 - FLAM_C SINE Alu 0 143 1 301 296 43 17 chr2 114133033 114133148 -136554706 + MIR SINE MIR 87 204 -58 837 265 145 3 chr2 114133462 114133835 -136554019 + MLT1J2 LTR MaLR 25 450 0 288 264 18 36 chr2 114133839 114133949 -136553905 + L2 LINE L2 2943 3050 -222 456 82 0 0 chr2 114134293 114134354 -136553500 - L1P LINE L1 -3116 3030 2970 4043 72 4 0 chr2 114134360 114134873 -136552981 + L1PA6 LINE L1 5640 6154 0 2117 176 49 0 chr2 114134943 114135352 -136552502 - L1MB5 LINE L1 0 6174 5746 646 234 122 30 chr2 114135362 114135559 -136552295 - MIR SINE MIR -46 216 2 1981 149 3 3 chr2 114136666 114136962 -136550892 - AluJo SINE Alu -16 296 1 268 275 110 0 chr2 114137014 114137105 -136550749 - MIR SINE MIR -99 163 63 758 240 0 11 chr2 114137266 114137445 -136550409 - MLT1A2 LTR MaLR -25 349 173 577 81 0 20 chr2 114137445 114137544 -136550310 + (GA)n Simple_repeat Simple_repeat 2 98 0 764 181 45 0 chr2 114137550 114137705 -136550149 - MLT1A2 LTR MaLR -212 162 1 882 167 32 16 chr2 114137868 114138054 -136549800 + MER53 DNA DNA 1 189 0 1356 189 27 20 chr2 114138200 114138497 -136549357 - L1MB3 LINE L1 -2 6181 5883 309 309 59 33 chr2 114140088 114140240 -136547614 + MIR SINE MIR 99 254 -8 200 345 121 31 chr2 114140372 114140595 -136547259 + MIR SINE MIR 1 243 -19 1322 137 69 1 chr2 114140859 114141109 -136546745 - MER33 DNA MER1_type -70 254 1 2132 92 4 0 chr2 114141315 114141587 -136546267 - AluSp SINE Alu -40 273 1 188 173 37 50 chr2 114141973 114142022 -136545832 - MIR SINE MIR -58 150 102 318 319 49 38 chr2 114143929 114144114 -136543740 - L2 LINE L2 -1 3312 3126 426 239 307 6 chr2 114144127 114144290 -136543564 - MIR SINE MIR -2 260 49 319 280 231 11 chr2 114144371 114144553 -136543301 - L2 LINE L2 -200 3072 2851 811 274 37 0 chr2 114145037 114145252 -136542602 + MIR SINE MIR 30 252 -10 1239 308 153 29 chr2 114147652 114148416 -136539438 - L3 LINE CR1 -589 988 130 283 322 147 0 chr2 114149316 114149459 -136538395 - L2 LINE L2 -314 2999 2836 203 162 0 0 chr2 114151623 114151660 -136536194 + (CCA)n Simple_repeat Simple_repeat 1 37 0 207 196 0 20 chr2 114152528 114152579 -136535275 + GA-rich Low_complexity Low_complexity 4 53 0 314 230 38 0 chr2 114153017 114153108 -136534746 + MIR SINE MIR 49 143 -65 308 291 19 10 chr2 114156594 114156697 -136531157 + MER5B DNA MER1_type 1 104 -74 440 233 180 29 chr2 114156699 114156871 -136530983 + L1MC/D LINE L1 5449 5646 -2162 3111 106 3 8 chr2 114156913 114157617 -136530237 + TAR1 Satellite telomeric 1 700 -123 344 71 18 0 chr2 114157625 114157681 -136530173 + (TTGGGG)n Simple_repeat Simple_repeat 1 57 0 953 103 0 33 chr2 114157681 114157865 -136529989 + (TTAGGG)n Simple_repeat Simple_repeat 3 180 0 954 69 17 17 chr2 114157865 114158038 -136529816 + (CCCTAA)n Simple_repeat Simple_repeat 3 175 0 956 75 11 33 chr2 114158052 114158414 -136529440 + (CCCTAA)n Simple_repeat Simple_repeat 1 354 0 8859 31 4 4 chr2 114158414 114159777 -136528077 - TAR1 Satellite telomeric -980 1363 1 887 179 89 157 chr2 114159623 114160022 -136527832 - LTR60 LTR ERV1 -37 549 183 * 2769 23 3 0 chr2 114160022 114160326 -136527528 - AluYb8 SINE Alu -9 309 5 887 179 89 157 chr2 114160326 114160385 -136527469 - LTR60 LTR ERV1 -403 183 122 505 226 9 0 chr2 114160437 114160543 -136527311 - LTR60 LTR ERV1 -479 107 1 1090 232 82 20 chr2 114160559 114161170 -136526684 + L1MC/D LINE L1 4898 5546 -745 2513 171 60 11 chr2 114161181 114161731 -136526123 + MER34C LTR ERV1 7 583 -2 467 266 21 16 chr2 114161736 114161924 -136525930 + L1MC/D LINE L1 5577 5765 -2020 4020 135 72 45 chr2 114162133 114162773 -136525081 + MER72 LTR ERV1 1 663 -59 2309 100 3 3 chr2 114162773 114163072 -136524782 + AluSq SINE Alu 3 301 -12 4020 135 72 45 chr2 114163072 114163134 -136524720 + MER72 LTR ERV1 663 722 0 908 247 53 44 chr2 114163534 114163874 -136523980 + MER72-int LTR ERV1 173 515 -4421 658 264 23 25 chr2 114163849 114164213 -136523641 + MER72-int LTR ERV1 620 1063 -3873 * 2052 179 165 35 chr2 114164219 114164570 -136523284 - MLT2B3 LTR ERVL -3 551 118 2209 149 41 6 chr2 114164570 114164932 -136522922 - THE1C LTR MaLR 0 375 1 2052 179 165 35 chr2 114164932 114165066 -136522788 - MLT2B3 LTR ERVL -436 118 3 351 176 29 0 chr2 114165091 114165159 -136522695 - MLT2B3 LTR ERVL -482 72 3 321 206 29 0 chr2 114165184 114165252 -136522602 - MLT2B3 LTR ERVL -482 72 3 321 206 29 0 chr2 114165277 114165345 -136522509 - MLT2B3 LTR ERVL -482 72 3 330 206 29 0 chr2 114165370 114165438 -136522416 - MLT2B3 LTR ERVL -482 72 3 345 191 29 0 chr2 114165463 114165531 -136522323 - MLT2B3 LTR ERVL -482 72 3 330 206 29 0 chr2 114165556 114165624 -136522230 - MLT2B3 LTR ERVL -482 72 3 345 191 29 0 chr2 114165649 114165717 -136522137 - MLT2B3 LTR ERVL -482 72 3 328 191 29 0 chr2 114165742 114165810 -136522044 - MLT2B3 LTR ERVL -482 72 3 316 221 29 0 chr2 114165835 114165903 -136521951 - MLT2B3 LTR ERVL -482 72 3 341 176 29 0 chr2 114165928 114165996 -136521858 - MLT2B3 LTR ERVL -482 72 3 383 147 29 0 chr2 114166021 114166089 -136521765 - MLT2B3 LTR ERVL -482 72 3 275 224 45 0 chr2 114166114 114166181 -136521673 - MLT2B3 LTR ERVL -482 72 3 1467 215 20 27 chr2 114166184 114166631 -136521223 + MER72-int LTR ERV1 1063 1506 -3430 1147 205 82 63 chr2 114167237 114167725 -136520129 + MER72-int LTR ERV1 1699 2195 -2741 2889 214 45 76 chr2 114167762 114167934 -136519920 + MER72-int LTR ERV1 2939 3115 -1821 2244 97 0 0 chr2 114167934 114168233 -136519621 + AluY SINE Alu 4 302 0 2889 214 45 76 chr2 114168233 114169024 -136518830 + MER72-int LTR ERV1 3115 3873 -1063 348 24 0 0 chr2 114169082 114169123 -136518731 + (TG)n Simple_repeat Simple_repeat 2 42 0 1258 260 44 8 chr2 114169143 114169505 -136518349 + LTR10C LTR ERV1 188 562 -29 1744 204 14 5 chr2 114169543 114169910 -136517944 + MER72-int LTR ERV1 3859 4228 -708 253 224 13 20 chr2 114169930 114170012 -136517842 + AluSp SINE Alu 97 170 -133 1545 139 0 0 chr2 114170013 114170236 -136517618 + AluJb SINE Alu 68 290 -22 272 182 9 91 chr2 114170239 114170349 -136517505 + MER72-int LTR ERV1 4275 4375 -561 4665 226 168 20 chr2 114170476 114170881 -136516973 + L1MC3 LINE L1 5762 6106 -1679 1868 176 34 61 chr2 114170881 114171325 -136516529 + MSTB1 LTR MaLR 1 432 0 4665 226 168 20 chr2 114171325 114172681 -136515173 + L1MC3 LINE L1 6106 7784 -1 610 131 0 10 chr2 114173549 114173648 -136514206 + MER4A LTR ERV1 1 98 -566 1697 153 6 7 chr2 114173648 114173994 -136513860 + MER4A LTR ERV1 261 664 0 213 293 0 17 chr2 114174681 114174862 -136512992 + (CCCTAA)n Simple_repeat Simple_repeat 2 179 0 609 287 59 93 chr2 114175101 114175522 -136512332 + MLT1I LTR MaLR 3 409 0 21 36 0 0 chr2 114176666 114176694 -136511160 + AT_rich Low_complexity Low_complexity 1 28 0 203 108 54 0 chr2 114177889 114177926 -136509928 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 781 278 19 0 chr2 114178062 114178274 -136509580 + MER58A DNA MER1_type 9 224 0 290 297 22 0 chr2 114178994 114179085 -136508769 + MIR SINE MIR 54 146 -116 889 86 12 39 chr2 114179455 114179703 -136508151 + (CCCTAA)n Simple_repeat Simple_repeat 6 242 0 197 182 30 0 chr2 114180188 114180221 -136507633 + L3b LINE CR1 1524 1557 -26 296 282 129 18 chr2 114180465 114180628 -136507226 + L2 LINE L2 2448 2628 -686 572 75 54 11 chr2 114180667 114180760 -136507094 + MER4A LTR ERV1 3 99 -565 1386 113 128 26 chr2 114180811 114181077 -136506777 + MER4A LTR ERV1 372 664 0 573 135 21 0 chr2 114181215 114181311 -136506543 + MER4A LTR ERV1 1 98 -566 1757 120 26 22 chr2 114181311 114181655 -136506199 + MER4A LTR ERV1 261 664 0 958 122 54 0 chr2 114182588 114182735 -136505119 + FRAM SINE Alu 8 162 -14 189 254 15 75 chr2 114183360 114183427 -136504427 - L2 LINE L2 -1011 2303 2241 192 40 0 0 chr2 114184408 114184433 -136503421 + (TC)n Simple_repeat Simple_repeat 2 26 0 2487 60 0 13 chr2 114184473 114184774 -136503080 - AluY SINE Alu -14 297 1 565 107 13 0 chr2 114185346 114185421 -136502433 + AluJ/FRAM SINE Alu 217 292 -20 2258 112 16 7 chr2 114185826 114186131 -136501723 - AluSx SINE Alu -4 308 1 350 288 36 46 chr2 114187015 114187305 -136500549 - L2 LINE L2 -220 3093 2667 1120 86 172 17 chr2 114187328 114187502 -136500352 - AluSg SINE Alu -109 201 1 318 304 36 9 chr2 114188121 114188233 -136499621 + MIR SINE MIR 8 122 -140 255 218 28 113 chr2 114188276 114188418 -136499436 - MER5B DNA MER1_type -41 137 8 2399 82 0 3 chr2 114190761 114191052 -136496802 + AluSq SINE Alu 1 290 -23 258 234 160 11 chr2 114191252 114191346 -136496508 - MLT1G1 LTR MaLR -141 449 342 311 281 197 40 chr2 114191392 114191641 -136496213 - MLT1G1 LTR MaLR -305 290 3 2748 32 0 3 chr2 114191643 114191953 -136495901 + AluY SINE Alu 1 309 -2 2188 90 3 75 chr2 114193522 114193855 -136493999 + AluSx SINE Alu 1 309 -3 25 51 0 0 chr2 114193896 114193935 -136493919 + AT_rich Low_complexity Low_complexity 1 39 0 1857 169 3 13 chr2 114193937 114194251 -136493603 + AluJb SINE Alu 1 311 -1 2068 119 0 21 chr2 114194276 114194561 -136493293 + AluSx SINE Alu 1 279 -33 1691 143 0 0 chr2 114194568 114194806 -136493048 + AluSx SINE Alu 59 296 -16 1332 197 48 31 chr2 114194807 114195101 -136492753 + AluJo SINE Alu 4 302 0 2215 123 0 3 chr2 114195311 114195613 -136492241 - AluSq SINE Alu -12 301 1 2202 79 45 0 chr2 114197572 114197862 -136489992 - AluSc SINE Alu -6 303 1 545 233 151 27 chr2 114198777 114198996 -136488858 - LTR16A1 LTR ERVL -12 445 200 295 302 52 0 chr2 114199722 114199838 -136488016 - ERVL LTR ERVL -862 4902 4781 927 315 83 35 chr2 114199972 114200752 -136487102 + L1M4 LINE L1 2 1440 -5128 2296 185 48 46 chr2 114200766 114200850 -136487004 + L1MA10 LINE L1 5748 5830 -504 2191 61 10 51 chr2 114200850 114201172 -136486682 + AluY SINE Alu 1 310 0 2296 185 48 46 chr2 114201172 114201627 -136486227 + L1MA10 LINE L1 5830 6289 -45 2940 171 68 5 chr2 114201660 114202250 -136485604 + L1MB8 LINE L1 5338 5964 -214 1821 193 0 0 chr2 114202405 114202711 -136485143 + AluJo SINE Alu 5 310 -2 290 253 11 11 chr2 114202715 114202810 -136485044 + L1M4 LINE L1 4257 4351 -2293 2563 43 0 10 chr2 114202811 114203110 -136484744 + AluY SINE Alu 1 296 -15 2269 84 0 14 chr2 114203116 114203413 -136484441 + AluSg SINE Alu 1 293 -17 1217 258 19 19 chr2 114203420 114203792 -136484062 + L1MC3 LINE L1 6490 6861 -924 741 162 0 56 chr2 114203817 114203959 -136483895 + AluJo SINE Alu 4 137 -175 21 0 0 0 chr2 114203959 114203980 -136483874 + AT_rich Low_complexity Low_complexity 1 21 0 1921 212 80 31 chr2 114203980 114204583 -136483271 + L1MC3 LINE L1 6868 7499 -286 1320 223 81 73 chr2 114204625 114204991 -136482863 + L1M4 LINE L1 4334 4739 -1905 2179 133 0 0 chr2 114204991 114205293 -136482561 + AluSx SINE Alu 1 302 -10 1320 223 81 73 chr2 114205293 114205592 -136482262 + L1M4 LINE L1 4739 5034 -1610 2039 228 22 59 chr2 114208584 114208714 -136479140 + L1M4 LINE L1 4995 5128 -1516 3595 143 28 30 chr2 114208714 114209384 -136478470 - L1MA8 LINE L1 -3 6288 5620 2373 84 3 0 chr2 114209393 114209689 -136478165 - AluY SINE Alu -14 297 1 2039 228 22 59 chr2 114209689 114210029 -136477825 + L1M4 LINE L1 5136 5448 -1196 2319 105 0 10 chr2 114210029 114210335 -136477519 + AluSq SINE Alu 1 303 -10 2039 228 22 59 chr2 114210335 114210493 -136477361 + L1M4 LINE L1 5448 5610 -1034 547 228 104 5 chr2 114210498 114210709 -136477145 + L1ME1 LINE L1 4287 4518 -1628 * 1015 212 21 5 chr2 114210698 114211085 -136476769 + L1ME1 LINE L1 5093 5484 -682 12767 45 82 2 chr2 114211088 114212808 -136475046 + L1PA4 LINE L1 1 1858 -4288 28486 31 3 0 chr2 114213834 114218140 -136469714 + L1PA4 LINE L1 1843 6155 0 2014 265 44 13 chr2 114218138 114218756 -136469098 + L1ME1 LINE L1 5467 6103 -63 * 445 188 0 0 chr2 114218749 114218834 -136469020 + L1ME LINE L1 5598 5682 -484 * 280 281 12 0 chr2 114219579 114219661 -136468193 + L1MC/D LINE L1 5450 5532 -2276 196 328 101 0 chr2 114220644 114220763 -136467091 - MIR SINE MIR 0 262 132 1693 71 5 9 chr2 114221177 114221388 -136466466 - AluSg/x SINE Alu -18 292 83 279 265 0 0 chr2 114222286 114222354 -136465500 + (TA)n Simple_repeat Simple_repeat 2 69 0 555 122 0 0 chr2 114222562 114222652 -136465202 + (TGGGGG)n Simple_repeat Simple_repeat 1 90 0 2428 54 0 0 chr2 114224287 114224583 -136463271 + AluYa5 SINE Alu 1 296 -15 190 308 0 0 chr2 114224853 114224905 -136462949 + L2 LINE L2 3218 3269 -3 2552 61 0 0 chr2 114225057 114225352 -136462502 - AluY SINE Alu -16 295 1 2222 101 0 14 chr2 114225470 114225766 -136462088 - AluSq SINE Alu -21 292 1 657 245 12 130 chr2 114228054 114228462 -136459392 + MER34 LTR ERV1 182 541 -1 2228 91 44 0 chr2 114228788 114229085 -136458769 - AluY SINE Alu -1 310 1 319 296 99 12 chr2 114230558 114230720 -136457134 - MLT1K LTR MaLR -18 570 395 2261 179 14 30 chr2 114230720 114230921 -136456933 + MSTA LTR MaLR 1 204 -224 1931 164 14 29 chr2 114230921 114231268 -136456586 + MER61A LTR ERV1 2 343 0 2261 179 14 30 chr2 114231268 114231501 -136456353 + MSTA LTR MaLR 204 428 0 745 300 58 40 chr2 114231501 114231881 -136455973 - MLT1K LTR MaLR -189 399 13 311 322 118 1 chr2 114231950 114232103 -136455751 + MIR SINE MIR 31 198 -64 200 327 18 55 chr2 114232178 114232288 -136455566 + L2 LINE L2 3208 3313 0 348 229 48 0 chr2 114232512 114232595 -136455259 - MIR3 SINE MIR -41 167 81 195 42 0 0 chr2 114232845 114232869 -136454985 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 243 207 0 52 chr2 114233248 114233306 -136454548 - L2 LINE L2 0 3272 3218 328 278 167 0 chr2 114234007 114234097 -136453757 - MIR SINE MIR -66 142 38 195 283 141 11 chr2 114234156 114234248 -136453606 - MIR SINE MIR -1 261 158 368 308 80 9 chr2 114234305 114234464 -136453390 - MIR SINE MIR -44 218 44 1010 199 107 14 chr2 114235127 114235343 -136452511 - MLT1A1 LTR MaLR 0 365 130 391 236 28 38 chr2 114235339 114235445 -136452409 - MLT1A1 LTR MaLR -151 214 110 * 769 117 0 0 chr2 114236044 114236147 -136451707 + U6 snRNA snRNA 2 104 -3 286 275 28 9 chr2 114236159 114236268 -136451586 + L1M4 LINE L1 77 187 -6355 2059 107 18 4 chr2 114236348 114236655 -136451199 + AluSq SINE Alu 1 311 0 9053 225 53 88 chr2 114236665 114237110 -136450744 + L1M4 LINE L1 1434 1893 -4771 12925 44 6 2 chr2 114237110 114239391 -136448463 + L1PA5 LINE L1 3855 6147 -7 9053 225 53 88 chr2 114239391 114239447 -136448407 + L1M4 LINE L1 1893 1949 -4715 1723 153 52 0 chr2 114239447 114239734 -136448120 + AluSx SINE Alu 1 302 -10 9053 225 53 88 chr2 114239734 114240488 -136447366 + L1M4 LINE L1 1949 2728 -3936 7002 133 62 21 chr2 114240488 114241191 -136446663 + Tigger3b DNA MER2_type 1 773 -2255 2204 117 0 0 chr2 114241191 114241482 -136446372 + AluSc SINE Alu 1 291 -18 7002 133 62 21 chr2 114241482 114241960 -136445894 + Tigger3b DNA MER2_type 773 1230 -1 9053 225 53 88 chr2 114241960 114242038 -136445816 + L1M4 LINE L1 2728 2807 -3857 2252 96 0 23 chr2 114242038 114242340 -136445514 + AluSx SINE Alu 13 307 -5 9053 225 53 88 chr2 114242340 114242937 -136444917 + L1M4 LINE L1 2807 3424 -3240 1874 143 7 0 chr2 114242937 114243216 -136444638 + AluSx SINE Alu 1 281 -31 1230 146 5 15 chr2 114243218 114243424 -136444430 + AluSp SINE Alu 104 307 -6 9053 225 53 88 chr2 114243424 114244122 -136443732 + L1M4 LINE L1 3425 4146 -2518 1710 175 42 81 chr2 114244122 114244528 -136443326 - MLT1B LTR MaLR 0 390 1 9053 225 53 88 chr2 114244528 114245802 -136442052 + L1M4 LINE L1 4146 5464 -1200 3034 89 8 0 chr2 114245802 114246174 -136441680 + THE1C LTR MaLR 1 375 0 9053 225 53 88 chr2 114246174 114246273 -136441581 + L1M4 LINE L1 5464 5565 -1099 4348 126 8 2 chr2 114246273 114246894 -136440960 - L1PB3 LINE L1 -1 6153 5529 9053 225 53 88 chr2 114246894 114247695 -136440159 + L1M4 LINE L1 5565 6295 -369 2090 137 0 31 chr2 114248062 114248384 -136439470 - AluSx SINE Alu 0 312 1 2256 117 3 0 chr2 114248779 114249088 -136438766 - AluSg SINE Alu 0 310 1 2220 173 16 3 chr2 114249971 114250358 -136437496 + L1MA6 LINE L1 5902 6293 -7 2021 123 0 45 chr2 114250374 114250684 -136437170 + AluSx SINE Alu 1 296 -16 779 238 148 45 chr2 114250698 114251076 -136436778 - L1MC4a LINE L1 -1847 5961 5545 709 221 88 88 chr2 114251099 114251384 -136436470 + L1M4 LINE L1 4958 5242 -904 2148 97 0 49 chr2 114251427 114251735 -136436119 - AluSx SINE Alu -19 293 1 203 265 0 20 chr2 114252179 114252228 -136435626 + MIR SINE MIR 76 123 -139 1278 120 0 0 chr2 114252228 114252411 -136435443 - AluSg/x SINE Alu -2 308 126 21 0 0 0 chr2 114252438 114252459 -136435395 + AT_rich Low_complexity Low_complexity 1 21 0 2022 115 4 4 chr2 114252810 114253089 -136434765 + AluSx SINE Alu 1 279 -33 1048 72 7 7 chr2 114253089 114253241 -136434613 + (GGAA)n Simple_repeat Simple_repeat 1 152 0 429 176 102 0 chr2 114253344 114253452 -136434402 + L1MA8 LINE L1 6171 6289 -2 684 239 40 10 chr2 114253462 114253663 -136434191 + L1MC4 LINE L1 7686 7892 -150 246 274 26 51 chr2 114253746 114253833 -136434021 + L1MD3 LINE L1 7879 7964 -31 2133 132 0 23 chr2 114253833 114254143 -136433711 - AluSx SINE Alu -9 303 1 246 274 26 51 chr2 114254143 114254172 -136433682 + L1MD3 LINE L1 7964 7992 -3 242 175 16 48 chr2 114254191 114254254 -136433600 - FRAM SINE Alu -68 98 38 199 308 84 9 chr2 114254424 114254531 -136433323 + L2 LINE L2 2377 2491 -823 695 134 110 0 chr2 114254634 114254725 -136433129 + L1MB5 LINE L1 6033 6143 -31 2343 68 3 26 chr2 114254725 114255033 -136432821 - AluY SINE Alu -10 301 1 695 134 110 0 chr2 114255033 114255068 -136432786 + L1MB5 LINE L1 6143 6173 -1 22 35 0 0 chr2 114255068 114255097 -136432757 + AT_rich Low_complexity Low_complexity 1 29 0 2384 82 23 0 chr2 114255560 114255864 -136431990 - AluY SINE Alu 0 311 1 1740 147 3 61 chr2 114256202 114256514 -136431340 + AluSx SINE Alu 1 294 -18 196 279 107 7 chr2 114256823 114256942 -136430912 - L2 LINE L2 0 3313 3220 2215 130 0 0 chr2 114256942 114257243 -136430611 + AluSx SINE Alu 1 301 -11 196 279 107 7 chr2 114257243 114257284 -136430570 - L2 LINE L2 -93 3220 3184 286 170 19 0 chr2 114257290 114257343 -136430511 + AluSp SINE Alu 117 170 -133 243 0 0 0 chr2 114257372 114257399 -136430455 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 811 153 23 0 chr2 114257412 114257543 -136430311 + L1MC1 LINE L1 6200 6333 0 2390 62 24 0 chr2 114257947 114258235 -136429619 + AluY SINE Alu 1 295 -16 1786 104 48 41 chr2 114258395 114258592 -136429262 + LTR56 LTR ERV1 128 329 -116 2127 110 10 0 chr2 114258592 114258892 -136428962 + AluSg SINE Alu 1 303 -7 1786 104 48 41 chr2 114258892 114259010 -136428844 + LTR56 LTR ERV1 329 445 0 2075 160 52 4 chr2 114259420 114259854 -136428000 - MER89 LTR ERV1 -4 555 1 194 268 54 18 chr2 114259880 114259936 -136427918 + L2 LINE L2 3205 3262 -10 2304 115 0 3 chr2 114260036 114260349 -136427505 - AluSx SINE Alu 0 312 1 706 132 19 0 chr2 114260569 114260675 -136427179 + LTR23 LTR ERV1 310 417 -20 2384 71 7 0 chr2 114261074 114261369 -136426485 + AluSp SINE Alu 1 297 -16 2226 115 22 6 chr2 114261543 114261865 -136425989 - MER4D LTR ERV1 -576 327 1 339 326 15 8 chr2 114262261 114262393 -136425461 - MLT1H LTR MaLR -246 303 171 504 85 264 78 chr2 114262402 114262531 -136425323 - MER53 DNA DNA 0 189 37 802 256 10 88 chr2 114262561 114262657 -136425197 - MER21B LTR ERV1 -52 811 709 2159 119 3 0 chr2 114262657 114262959 -136424895 - AluSq SINE Alu -10 303 1 802 256 10 88 chr2 114262959 114263159 -136424695 - MER21B LTR ERV1 -154 709 538 2210 175 115 60 chr2 114263176 114263548 -136424306 + LTR8A LTR ERV1 34 450 -277 2145 120 0 0 chr2 114263548 114263867 -136423987 - AluSx SINE Alu 0 320 2 2210 175 115 60 chr2 114263867 114264058 -136423796 + LTR8A LTR ERV1 450 629 -98 1669 239 56 61 chr2 114264112 114264218 -136423636 - MER21B LTR ERV1 -326 537 432 5060 139 3 7 chr2 114264218 114264943 -136422911 + MER72 LTR ERV1 1 722 0 1669 239 56 61 chr2 114264943 114265376 -136422478 - MER21B LTR ERV1 -431 432 1 626 262 46 34 chr2 114265538 114265775 -136422079 + L1ME4a LINE L1 5586 5825 -296 2202 130 0 0 chr2 114265795 114266096 -136421758 - AluSx SINE Alu -1 311 11 304 292 53 0 chr2 114266126 114266239 -136421615 - L2 LINE L2 -11 3302 3184 261 305 12 0 chr2 114266473 114266555 -136421299 - L2 LINE L2 -972 2342 2260 1176 108 0 12 chr2 114266569 114266736 -136421118 + MSTA LTR MaLR 1 165 -263 1283 150 103 9 chr2 114266927 114267160 -136420694 - MSTA LTR MaLR 0 428 174 1873 148 0 24 chr2 114267160 114267330 -136420524 + AluJb SINE Alu 1 162 -155 2347 139 11 8 chr2 114267330 114267683 -136420171 - THE1A LTR MaLR -1 354 1 1873 148 0 24 chr2 114267683 114267836 -136420018 + AluJb SINE Alu 162 317 0 829 149 156 0 chr2 114267836 114267990 -136419864 - MSTA LTR MaLR -250 178 1 9072 178 44 18 chr2 114267993 114269597 -136418257 - MSTA-int LTR MaLR -4 1647 1 1950 153 148 21 chr2 114269597 114269976 -136417878 - MSTA LTR MaLR 0 428 2 2866 144 43 86 chr2 114270052 114270658 -136417196 + LTR49 LTR ERV1 1 580 -15 1672 140 9 4 chr2 114270888 114271341 -136416513 + LTR45 LTR ERV1 1 523 -2 1129 201 44 136 chr2 114272091 114272452 -136415402 + MER63B DNA MER1_type 4 312 -750 1805 146 40 20 chr2 114272452 114272754 -136415100 - AluJb SINE Alu -4 308 1 1129 201 44 136 chr2 114272754 114272869 -136414985 + MER63B DNA MER1_type 312 436 0 1537 221 225 16 chr2 114273320 114273562 -136414292 - MLT1F1 LTR MaLR 0 567 377 1680 185 20 3 chr2 114273562 114273734 -136414120 - AluJo SINE Alu -15 297 116 195 114 0 0 chr2 114273734 114273769 -136414085 + (TG)n Simple_repeat Simple_repeat 2 36 0 1680 185 20 3 chr2 114273769 114273888 -136413966 - AluJo SINE Alu -196 116 1 1537 221 225 16 chr2 114273888 114274098 -136413756 - MLT1F1 LTR MaLR -190 377 20 2250 92 0 7 chr2 114274098 114274393 -136413461 - AluSg SINE Alu -1 309 17 1385 163 86 52 chr2 114274417 114274485 -136413369 - MSTB1 LTR MaLR 0 432 368 1931 160 7 3 chr2 114274485 114274791 -136413063 + AluJb SINE Alu 1 307 -5 1385 163 86 52 chr2 114274791 114275096 -136412758 - MSTB1 LTR MaLR -64 368 5 201 121 0 0 chr2 114276488 114276521 -136411333 + (CA)n Simple_repeat Simple_repeat 2 34 0 2505 46 0 0 chr2 114276538 114276849 -136411005 + AluY SINE Alu 1 311 0 993 304 42 9 chr2 114277011 114277347 -136410507 + MLT1I LTR MaLR 63 409 0 207 329 24 12 chr2 114277361 114277446 -136410408 + L2 LINE L2 2825 2910 -404 845 131 369 0 chr2 114277562 114277730 -136410124 + MER30 DNA MER1_type 1 230 0 2003 136 7 7 chr2 114277858 114278153 -136409701 + AluSx SINE Alu 1 295 -17 1817 182 3 7 chr2 114278382 114278690 -136409164 + AluSx SINE Alu 1 307 -5 240 35 0 0 chr2 114278712 114278741 -136409113 + (TC)n Simple_repeat Simple_repeat 2 30 0 2590 145 61 46 chr2 114279423 114280523 -136407331 - pTR5 LTR ERV1 -132 1440 118 705 212 8 0 chr2 114280668 114280800 -136407054 + MER94 DNA DNA 2 134 0 2404 68 0 3 chr2 114280825 114281117 -136406737 + AluSc SINE Alu 1 291 -18 316 262 175 0 chr2 114281768 114281871 -136405983 + LTR33A LTR ERVL 70 190 -333 295 250 90 0 chr2 114281918 114282018 -136405836 + LTR33A LTR ERVL 277 385 -138 26 50 0 0 chr2 114282559 114282599 -136405255 + AT_rich Low_complexity Low_complexity 1 40 0 2246 116 0 3 chr2 114283111 114283414 -136404440 - AluSx SINE Alu -10 302 1 2287 116 0 3 chr2 114283976 114284286 -136403568 + AluSx SINE Alu 1 309 -3 237 313 24 12 chr2 114284915 114284998 -136402856 - MIR3 SINE MIR -6 202 119 623 119 38 186 chr2 114285230 114285362 -136402492 + MER5A DNA MER1_type 11 102 -87 1730 160 0 20 chr2 114285362 114285656 -136402198 - AluJo SINE Alu -11 301 14 623 119 38 186 chr2 114285656 114285733 -136402121 + MER5A DNA MER1_type 102 189 0 1603 125 18 137 chr2 114286002 114286339 -136401515 + AluSx SINE Alu 2 298 -4 24 0 0 0 chr2 114287776 114287800 -136400054 + AT_rich Low_complexity Low_complexity 1 24 0 2453 34 10 0 chr2 114287877 114288168 -136399686 - AluY SINE Alu -17 294 1 189 0 0 0 chr2 114289303 114289324 -136398530 + (A)n Simple_repeat Simple_repeat 1 21 0 866 153 164 0 chr2 114291222 114291399 -136396455 + MER6B DNA MER2_type 5 210 0 821 177 0 8 chr2 114291505 114291635 -136396219 - FLAM_C SINE Alu -14 129 1 730 294 9 14 chr2 114291731 114291945 -136395909 + HAL1 LINE L1 289 501 -2006 676 239 34 106 chr2 114291952 114292388 -136395466 + HAL1 LINE L1 2100 2504 -3 690 296 25 7 chr2 114293002 114293220 -136394634 - MIR SINE MIR -32 230 19 180 318 32 16 chr2 114293439 114293502 -136394352 - L3b LINE CR1 -17 1566 1503 1491 160 4 42 chr2 114293637 114293900 -136393954 - AluJo SINE Alu -18 294 42 1659 130 4 0 chr2 114294116 114294346 -136393508 + AluSx SINE Alu 50 280 -32 1069 67 22 22 chr2 114294346 114294524 -136393330 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 22 56 0 0 chr2 114295421 114295457 -136392397 + AT_rich Low_complexity Low_complexity 1 36 0 192 185 0 0 chr2 114295599 114295653 -136392201 + A-rich Low_complexity Low_complexity 1 54 0 21 57 0 0 chr2 114296601 114296636 -136391218 + AT_rich Low_complexity Low_complexity 1 35 0 2492 81 3 0 chr2 114297518 114297827 -136390027 - AluSx SINE Alu -2 310 1 243 88 0 0 chr2 114297930 114297964 -136389890 + (CA)n Simple_repeat Simple_repeat 2 35 0 21 71 0 0 chr2 114298749 114298791 -136389063 + AT_rich Low_complexity Low_complexity 1 42 0 311 309 128 0 chr2 114299545 114299694 -136388160 + L3 LINE CR1 1335 1502 -75 470 217 66 0 chr2 114300693 114300799 -136387055 - L2 LINE L2 0 3313 3201 668 248 115 43 chr2 114301656 114301890 -136385964 + MIR SINE MIR 12 262 0 295 242 118 91 chr2 114302159 114302523 -136385331 + LTR16A1 LTR ERVL 76 449 -8 1912 108 66 39 chr2 114302526 114302888 -136384966 + THE1C LTR MaLR 4 375 0 940 193 0 12 chr2 114303550 114303711 -136384143 - AluJo SINE Alu -19 293 135 27 81 0 0 chr2 114303813 114303875 -136383979 + AT_rich Low_complexity Low_complexity 1 62 0 719 178 0 0 chr2 114303875 114303993 -136383861 - FLAM_C SINE Alu -25 118 1 198 139 0 93 chr2 114304157 114304200 -136383654 - MIR3 SINE MIR -39 169 131 27 49 0 0 chr2 114305902 114305943 -136381911 + AT_rich Low_complexity Low_complexity 1 41 0 771 159 32 0 chr2 114306161 114306287 -136381567 - AluJo SINE Alu -172 130 1 2496 223 69 9 chr2 114306350 114307018 -136380836 + L1MC4a LINE L1 7101 7808 0 734 186 93 83 chr2 114307369 114307573 -136380281 - MIR SINE MIR -51 211 6 327 297 129 0 chr2 114307809 114307910 -136379944 - L2 LINE L2 0 3272 3159 961 245 34 13 chr2 114308254 114308491 -136379363 - MIR SINE MIR -1 261 20 806 203 128 0 chr2 114308678 114308865 -136378989 - MER58A DNA MER1_type -13 211 1 233 370 87 7 chr2 114309474 114309612 -136378242 - L2 LINE L2 -1 3271 3123 2168 130 17 12 chr2 114310830 114311176 -136376678 - MER7A DNA MER2_type 0 346 1 1875 142 24 20 chr2 114311715 114312010 -136375844 + AluJb SINE Alu 1 296 -16 225 219 29 114 chr2 114312510 114312615 -136375239 - L1ME LINE L1 -456 5714 5619 2825 160 54 41 chr2 114313533 114314163 -136373691 - L1MA9 LINE L1 -32 6280 5643 1408 168 18 45 chr2 114314292 114314625 -136373229 + MER33 DNA MER1_type 1 324 0 1124 173 129 50 chr2 114314679 114314997 -136372857 + MER2 DNA MER2_type 2 344 0 2282 164 33 16 chr2 114315272 114315698 -136372156 - Tigger2a DNA MER2_type -1 433 1 675 136 23 57 chr2 114316045 114316178 -136371676 - L1MB5 LINE L1 0 6174 6061 2179 110 0 3 chr2 114316178 114316478 -136371376 - AluSc SINE Alu -10 299 1 675 136 23 57 chr2 114316478 114316513 -136371341 - L1MB5 LINE L1 -113 6061 6026 2427 142 29 20 chr2 114316568 114316972 -136370882 + L1MB3 LINE L1 5729 6139 -44 2243 91 10 3 chr2 114316972 114317268 -136370586 + AluSp SINE Alu 1 298 -15 2427 142 29 20 chr2 114317268 114317314 -136370540 + L1MB3 LINE L1 6139 6183 0 208 250 0 19 chr2 114318982 114319034 -136368820 + (TATG)n Simple_repeat Simple_repeat 4 54 0 472 250 54 60 chr2 114319672 114319840 -136368014 - L2 LINE L2 -1 3312 3146 254 369 25 19 chr2 114319918 114320019 -136367835 - MIR SINE MIR -3 259 155 2013 107 7 24 chr2 114320019 114320310 -136367544 + AluSx SINE Alu 1 286 -26 254 369 25 19 chr2 114320310 114320368 -136367486 - MIR SINE MIR -107 155 99 743 224 81 40 chr2 114321033 114321256 -136366598 + AluJo SINE Alu 81 312 0 253 278 28 0 chr2 114321409 114321481 -136366373 + L2 LINE L2 3240 3313 0 234 233 82 27 chr2 114322033 114322106 -136365748 - MIR SINE MIR -76 186 110 357 234 31 109 chr2 114322220 114322239 -136365615 - Charlie1 DNA MER1_type -1337 118 99 1729 135 23 8 chr2 114322239 114322498 -136365356 + AluSq SINE Alu 44 306 -7 357 234 31 109 chr2 114322498 114322560 -136365294 - Charlie1 DNA MER1_type -1356 99 48 2146 113 7 3 chr2 114322560 114322852 -136365002 + AluSx SINE Alu 3 295 -17 357 234 31 109 chr2 114322852 114322897 -136364957 - Charlie1 DNA MER1_type -1407 48 1 234 237 34 0 chr2 114322970 114323029 -136364825 - MIR SINE MIR -150 112 52 240 337 0 0 chr2 114323270 114323353 -136364501 + L1ME LINE L1 5525 5607 -514 2160 110 3 0 chr2 114323362 114323661 -136364193 + AluSx SINE Alu 1 300 -12 241 93 47 0 chr2 114323662 114323705 -136364149 + L1ME4a LINE L1 5820 5864 -314 1911 161 7 3 chr2 114323713 114324018 -136363836 - AluSx SINE Alu -6 306 1 354 227 126 8 chr2 114324056 114324175 -136363679 + L1ME4a LINE L1 5968 6100 -21 2058 102 11 3 chr2 114324357 114324642 -136363212 - AluSc SINE Alu -11 298 12 565 135 0 10 chr2 114324646 114324742 -136363112 - AluJ/FLAM SINE Alu -217 95 1 1572 188 17 7 chr2 114324772 114325060 -136362794 + AluJo SINE Alu 2 292 -20 835 215 67 14 chr2 114325150 114325373 -136362481 + L1MB4 LINE L1 5946 6180 0 184 359 47 31 chr2 114326353 114326414 -136361440 - L2 LINE L2 -18 3254 3195 1648 177 3 10 chr2 114326414 114326719 -136361135 + AluJb SINE Alu 1 303 -9 184 359 47 31 chr2 114326719 114326785 -136361069 - L2 LINE L2 -77 3195 3125 192 40 0 0 chr2 114326889 114326914 -136360940 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 585 251 35 64 chr2 114326962 114327079 -136360775 + L1MC5 LINE L1 6619 6738 -1070 1907 149 0 10 chr2 114327079 114327375 -136360479 + AluSx SINE Alu 1 293 -19 585 251 35 64 chr2 114327375 114327482 -136360372 + L1MC5 LINE L1 6738 6790 -1018 2295 99 0 16 chr2 114327482 114327785 -136360069 + AluSq SINE Alu 2 299 -14 585 251 35 64 chr2 114327785 114327811 -136360043 + L1MC5 LINE L1 6790 6815 -993 342 161 23 35 chr2 114327814 114327901 -136359953 + L1MC5 LINE L1 7123 7208 -753 841 228 85 80 chr2 114328053 114328654 -136359200 + L1MC5 LINE L1 7304 7907 -54 2281 103 10 0 chr2 114328717 114329027 -136358827 - AluSq SINE Alu 0 313 1 492 184 39 0 chr2 114329164 114329267 -136358587 - L1MA9 LINE L1 -4 6308 6202 35 63 0 0 chr2 114329338 114329401 -136358453 + AT_rich Low_complexity Low_complexity 1 63 0 2412 77 0 16 chr2 114329560 114329871 -136357983 + AluSg SINE Alu 1 306 -4 581 265 51 46 chr2 114331787 114331983 -136355871 + MIR SINE MIR 58 254 -8 1891 136 0 7 chr2 114331986 114332280 -136355574 - AluJb SINE Alu -7 305 14 2402 35 0 7 chr2 114332654 114332962 -136354892 + AluY SINE Alu 1 306 0 319 261 54 36 chr2 114333160 114333271 -136354583 + MIR SINE MIR 33 145 -63 241 309 49 37 chr2 114333750 114333831 -136354023 + L3 LINE CR1 1429 1510 -67 199 191 0 43 chr2 114334314 114334361 -136353493 + MER5B DNA MER1_type 7 51 -127 28 29 0 0 chr2 114334692 114334727 -136353127 + AT_rich Low_complexity Low_complexity 1 35 0 364 288 56 16 chr2 114334819 114334944 -136352910 + MIR SINE MIR 50 179 -83 188 246 197 0 chr2 114334956 114335017 -136352837 + L2 LINE L2 3235 3307 -6 21 0 0 0 chr2 114335106 114335127 -136352727 + AT_rich Low_complexity Low_complexity 1 21 0 1914 134 17 3 chr2 114335350 114335640 -136352214 + AluSg SINE Alu 1 294 -16 2227 134 0 0 chr2 114335861 114336167 -136351687 - AluSg SINE Alu -4 306 1 1038 208 37 28 chr2 114336510 114336726 -136351128 + MER20 DNA MER1_type 2 219 0 2048 144 0 0 chr2 114336939 114337237 -136350617 + AluJb SINE Alu 4 301 -11 4787 144 8 79 chr2 114337238 114337831 -136350023 + L1MA8 LINE L1 4482 5115 -1176 1558 182 72 14 chr2 114337831 114338122 -136349732 + AluJo SINE Alu 3 310 -2 4787 144 8 79 chr2 114338122 114338398 -136349456 + L1MA8 LINE L1 5115 5267 -1024 2111 110 7 0 chr2 114338398 114338702 -136349152 + AluSq SINE Alu 1 306 0 4787 144 8 79 chr2 114338702 114339080 -136348774 + L1MA8 LINE L1 5267 5670 -621 1145 203 170 27 chr2 114339081 114339220 -136348634 + MER2 DNA MER2_type 2 120 -225 2141 154 21 24 chr2 114339220 114339596 -136348258 - THE1C LTR MaLR 0 375 1 1145 203 170 27 chr2 114339596 114339756 -136348098 + MER2 DNA MER2_type 120 344 -1 2765 152 20 28 chr2 114339757 114340211 -136347643 + L1MA8 LINE L1 5669 6120 -171 2216 102 0 3 chr2 114340211 114340505 -136347349 + AluY SINE Alu 1 293 -18 2765 152 20 28 chr2 114340505 114340556 -136347298 + L1MA8 LINE L1 6120 6170 -121 1786 110 0 30 chr2 114341601 114341864 -136345990 + AluSx SINE Alu 14 268 -44 212 318 78 32 chr2 114342042 114342196 -136345658 + L2 LINE L2 2768 2928 -386 291 254 15 0 chr2 114342406 114342473 -136345381 + L2 LINE L2 3246 3313 0 371 266 124 40 chr2 114342668 114342845 -136345009 + L1ME LINE L1 5471 5662 -459 285 299 51 26 chr2 114342892 114343009 -136344845 - MLT1J LTR MaLR -389 122 3 614 261 22 0 chr2 114343056 114343194 -136344660 + MLT1J LTR MaLR 40 180 -331 1763 162 0 53 chr2 114343199 114343520 -136344334 + AluJo SINE Alu 1 304 -8 2402 77 3 3 chr2 114343943 114344242 -136343612 - AluSq SINE Alu -14 299 1 192 77 0 0 chr2 114344250 114344276 -136343578 + (T)n Simple_repeat Simple_repeat 1 26 0 917 163 77 34 chr2 114344565 114344774 -136343080 + L1MB7 LINE L1 5951 6168 -16 2097 122 0 3 chr2 114344915 114345211 -136342643 - AluSx SINE Alu -16 296 2 888 238 65 16 chr2 114345213 114345461 -136342393 - L1ME1 LINE L1 -96 6070 5811 1977 107 4 4 chr2 114345461 114345732 -136342122 + AluSx SINE Alu 1 271 -41 248 136 0 0 chr2 114345865 114345915 -136341939 - Alu SINE Alu -256 47 12 183 139 0 0 chr2 114345998 114346034 -136341820 + (TG)n Simple_repeat Simple_repeat 2 37 0 256 236 27 45 chr2 114346646 114346756 -136341098 - MIR SINE MIR -55 207 100 2271 112 0 7 chr2 114346757 114347062 -136340792 + AluSg SINE Alu 1 303 -7 2144 93 0 55 chr2 114347169 114347480 -136340374 + AluSq SINE Alu 1 294 -19 273 57 0 0 chr2 114347480 114347515 -136340339 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 312 27 0 0 chr2 114347542 114347579 -136340275 + (TG)n Simple_repeat Simple_repeat 2 38 0 534 221 0 73 chr2 114347583 114347690 -136340164 + L2 LINE L2 3188 3285 -28 1783 150 22 29 chr2 114347690 114348004 -136339850 - AluJo SINE Alu 0 312 1 534 221 0 73 chr2 114348004 114348032 -136339822 + L2 LINE L2 3285 3313 0 288 206 63 0 chr2 114348474 114348537 -136339317 + L2 LINE L2 3246 3312 -1 183 328 148 27 chr2 114348844 114349027 -136338827 + L2 LINE L2 2866 3070 -202 887 284 94 23 chr2 114349219 114349718 -136338136 + L2 LINE L2 2501 3073 -240 2009 124 3 3 chr2 114349725 114350031 -136337823 + AluSx SINE Alu 1 306 0 2247 90 0 23 chr2 114350137 114350438 -136337416 + AluSq SINE Alu 1 294 -19 273 57 0 0 chr2 114350438 114350473 -136337381 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 492 18 0 0 chr2 114350500 114350557 -136337297 + (TG)n Simple_repeat Simple_repeat 2 58 0 547 213 0 73 chr2 114350561 114350668 -136337186 + L2 LINE L2 3188 3285 -28 1783 150 22 29 chr2 114350668 114350982 -136336872 - AluJo SINE Alu 0 312 1 547 213 0 73 chr2 114350982 114351010 -136336844 + L2 LINE L2 3285 3313 0 288 206 63 0 chr2 114351452 114351515 -136336339 + L2 LINE L2 3246 3312 -1 199 322 148 27 chr2 114351822 114352005 -136335849 + L2 LINE L2 2866 3070 -202 445 184 14 161 chr2 114352675 114352898 -136334956 + L1MC5 LINE L1 6794 6983 -978 6556 34 0 4 chr2 114352931 114353668 -136334186 - L1PA5 LINE L1 -7 6147 5414 2008 150 0 10 chr2 114353719 114354026 -136333828 - AluSx SINE Alu -8 304 1 1890 150 0 29 chr2 114354198 114354562 -136333292 - AluSx SINE Alu 0 356 2 2329 207 82 26 chr2 114354606 114355229 -136332625 - MER76 LTR ERV -30 658 1 265 295 32 21 chr2 114355229 114355324 -136332530 + MLT1H LTR MaLR 82 177 -372 1329 174 64 86 chr2 114355407 114355648 -136332206 + L1MC5 LINE L1 7166 7411 -550 1611 148 83 18 chr2 114355648 114355925 -136331929 + AluSx SINE Alu 5 299 -13 1329 174 64 86 chr2 114355925 114356043 -136331811 + L1MC5 LINE L1 7411 7517 -444 1942 155 0 3 chr2 114356043 114356333 -136331521 + AluSx SINE Alu 1 289 -23 1329 174 64 86 chr2 114356333 114356392 -136331462 + L1MC5 LINE L1 7517 7576 -385 735 210 0 8 chr2 114356430 114356554 -136331300 + FLAM_C SINE Alu 1 123 -20 907 166 61 64 chr2 114356593 114356666 -136331188 + L1MC5 LINE L1 7613 7685 -276 2112 255 94 8 chr2 114356666 114357176 -136330678 - MLT1H1 LTR MaLR 0 555 2 907 166 61 64 chr2 114357176 114357415 -136330439 + L1MC5 LINE L1 7685 7924 -37 1973 134 0 38 chr2 114357425 114357745 -136330109 + AluSc SINE Alu 1 308 -1 237 271 0 139 chr2 114358814 114358862 -136328992 + MIR SINE MIR 76 98 -164 2166 129 0 0 chr2 114358862 114359172 -136328682 - AluSx SINE Alu -2 310 1 237 271 0 139 chr2 114359172 114359245 -136328609 + MIR SINE MIR 98 180 -82 2120 92 34 7 chr2 114359476 114359768 -136328086 + AluSx SINE Alu 1 300 -12 1060 122 0 0 chr2 114359809 114359957 -136327897 - AluSg/x SINE Alu -10 300 153 193 306 28 56 chr2 114360078 114360150 -136327704 - MIR SINE MIR -95 113 44 31 26 0 0 chr2 114360629 114360667 -136327187 + AT_rich Low_complexity Low_complexity 1 38 0 649 266 46 46 chr2 114360681 114361069 -136326785 - L1ME4a LINE L1 -30 6091 5703 2189 111 7 0 chr2 114361069 114361366 -136326488 + AluSq SINE Alu 1 299 -14 349 273 9 133 chr2 114361453 114361775 -136326079 - HAL1 LINE L1 -5 2502 2221 2154 138 0 0 chr2 114362338 114362634 -136325220 + AluSx SINE Alu 1 296 -16 23 0 0 0 chr2 114362648 114362671 -136325183 + AT_rich Low_complexity Low_complexity 1 23 0 421 186 13 98 chr2 114362913 114363067 -136324787 - MLT1H LTR MaLR -369 180 1 339 326 15 8 chr2 114363374 114363506 -136324348 - MLT1H LTR MaLR -246 303 171 504 85 264 78 chr2 114363515 114363644 -136324210 - MER53 DNA DNA 0 189 37 838 242 10 91 chr2 114363674 114363770 -136324084 - MER21B LTR ERV1 -52 811 709 2176 116 3 0 chr2 114363770 114364072 -136323782 - AluSq SINE Alu -10 303 1 838 242 10 91 chr2 114364072 114364273 -136323581 - MER21B LTR ERV1 -154 709 538 1784 171 16 50 chr2 114364290 114364669 -136323185 + LTR8A LTR ERV1 34 399 -328 2183 93 4 4 chr2 114364699 114364979 -136322875 - AluSc SINE Alu -29 280 1 868 185 19 6 chr2 114364979 114365141 -136322713 - FRAM SINE Alu -12 164 1 1590 181 55 3 chr2 114366267 114366560 -136321294 + AluJo SINE Alu 3 310 -2 24 67 0 0 chr2 114366564 114366609 -136321245 + AT_rich Low_complexity Low_complexity 1 45 0 24 0 0 0 chr2 114366972 114366996 -136320858 + AT_rich Low_complexity Low_complexity 1 24 0 2636 33 3 0 chr2 114368053 114368357 -136319497 + AluY SINE Alu 1 305 -6 1179 106 6 0 chr2 114368366 114368526 -136319328 + AluSg/x SINE Alu 143 303 -9 291 133 44 0 chr2 114368566 114368611 -136319243 - MSTD LTR MaLR 0 432 386 2653 109 22 6 chr2 114368611 114368969 -136318885 + THE1B LTR MaLR 1 364 0 913 199 6 28 chr2 114368992 114369168 -136318686 - FAM SINE Alu -3 172 1 1109 206 161 34 chr2 114369172 114369464 -136318390 - MSTD LTR MaLR -39 357 29 649 268 43 43 chr2 114370204 114370439 -136317415 - MIR SINE MIR 0 262 28 2164 131 3 0 chr2 114370935 114371240 -136316614 + AluSx SINE Alu 1 306 -6 453 268 9 9 chr2 114371397 114371509 -136316345 + L2 LINE L2 3202 3313 0 240 265 15 0 chr2 114371681 114371749 -136316105 + L1 LINE L1 4764 4832 -1314 204 111 0 0 chr2 114371757 114371793 -136316061 + (CA)n Simple_repeat Simple_repeat 2 37 0 1938 152 0 10 chr2 114371951 114372253 -136315601 + AluSx SINE Alu 1 299 -13 467 175 76 99 chr2 114372260 114372371 -136315483 + L1MC5 LINE L1 7410 7517 -444 1942 155 0 3 chr2 114372371 114372661 -136315193 + AluSx SINE Alu 1 289 -23 467 175 76 99 chr2 114372661 114372720 -136315134 + L1MC5 LINE L1 7517 7576 -385 735 210 0 8 chr2 114372758 114372882 -136314972 + FLAM_C SINE Alu 1 123 -20 907 166 61 64 chr2 114372921 114372994 -136314860 + L1MC5 LINE L1 7613 7685 -276 2095 257 94 8 chr2 114372994 114373504 -136314350 - MLT1H1 LTR MaLR 0 555 2 907 166 61 64 chr2 114373504 114373743 -136314111 + L1MC5 LINE L1 7685 7924 -37 1973 125 0 37 chr2 114373753 114374050 -136313804 + AluSc SINE Alu 1 286 -23 449 292 162 7 chr2 114374290 114374444 -136313410 + HAL1 LINE L1 1662 1839 -668 757 235 195 53 chr2 114374459 114374854 -136313000 - MLT1H LTR MaLR 0 549 99 720 200 0 24 chr2 114374924 114375049 -136312805 - FLAM_C SINE Alu -12 131 10 238 228 0 18 chr2 114375082 114375139 -136312715 + L2 LINE L2 3161 3216 -97 621 192 0 0 chr2 114375454 114375558 -136312296 - U13 snRNA snRNA 0 104 1 229 230 115 11 chr2 114375626 114375713 -136312141 + Charlie7 DNA MER1_type 2508 2603 -9 309 233 158 75 chr2 114375727 114375847 -136312007 + Charlie8 DNA MER1_type 6 135 -2282 2279 67 0 3 chr2 114375849 114376164 -136311690 - AluY SINE Alu 0 314 1 212 353 15 0 chr2 114376199 114376267 -136311587 + L2 LINE L2 3001 3069 -203 353 188 0 0 chr2 114376292 114376356 -136311498 + Tigger2 DNA MER2_type 10 73 -2645 579 187 25 153 chr2 114376389 114376592 -136311262 - MER8 DNA MER2_type -62 177 1 214 263 0 71 chr2 114376659 114376758 -136311096 + MIR SINE MIR 114 205 -57 2245 82 7 0 chr2 114376761 114377077 -136310777 + AluY SINE Alu 1 318 0 211 346 29 0 chr2 114377415 114377519 -136310335 + L2 LINE L2 794 900 -2414 780 200 7 0 chr2 114378670 114378825 -136309029 + L1M3 LINE L1 5334 5489 -691 252 180 0 66 chr2 114378835 114378896 -136308958 - MER81 DNA DNA -55 59 3 21 0 0 0 chr2 114379249 114379270 -136308584 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 114379433 114379456 -136308398 + AT_rich Low_complexity Low_complexity 1 23 0 1015 174 67 0 chr2 114379679 114379857 -136307997 + AluJo SINE Alu 87 276 -36 988 55 7 14 chr2 114380334 114380479 -136307375 + (TCTA)n Simple_repeat Simple_repeat 3 146 0 1962 140 0 0 chr2 114381003 114381275 -136306579 - AluSx SINE Alu -40 272 1 438 212 13 1 chr2 114381959 114382055 -136305799 - MLT1I LTR MaLR -28 420 296 2301 102 3 0 chr2 114382094 114382397 -136305457 - AluSx SINE Alu -8 304 1 269 253 36 12 chr2 114383284 114383367 -136304487 + LTR33A LTR ERVL 45 129 -394 28 0 0 0 chr2 114383569 114383597 -136304257 + AT_rich Low_complexity Low_complexity 1 28 0 2262 97 0 3 chr2 114383597 114383887 -136303967 - AluSq SINE Alu -24 289 1 2918 181 39 13 chr2 114384072 114384614 -136303240 - MER21A LTR ERV1 0 931 376 1351 164 43 12 chr2 114384619 114384858 -136302996 - MER21A LTR ERV1 -667 264 15 441 0 0 0 chr2 114384858 114384907 -136302947 + (TG)n Simple_repeat Simple_repeat 2 50 0 1351 164 43 12 chr2 114384907 114384923 -136302931 - MER21A LTR ERV1 -916 15 1 1334 157 43 70 chr2 114385465 114385765 -136302089 + AluJb SINE Alu 4 295 -17 741 234 41 6 chr2 114386030 114386201 -136301653 + MER69A DNA AcHobo 1 177 0 355 262 18 73 chr2 114386311 114386475 -136301379 + MIR SINE MIR 2 156 -106 1005 193 115 8 chr2 114386481 114386724 -136301130 + ORSL DNA AcHobo 7 275 0 340 287 21 70 chr2 114387070 114387213 -136300641 - MER5B DNA MER1_type -41 137 2 389 307 16 79 chr2 114387740 114387871 -136299983 + L1M4 LINE L1 2269 2378 -3768 2231 89 48 0 chr2 114387871 114388164 -136299690 + AluY SINE Alu 1 307 -4 389 307 16 79 chr2 114388164 114388286 -136299568 + L1M4 LINE L1 2378 2506 -3640 822 324 66 22 chr2 114388530 114388984 -136298870 - L2 LINE L2 -524 2790 2317 340 279 116 23 chr2 114389033 114389205 -136298649 + MIR SINE MIR 2 189 -73 1920 149 87 55 chr2 114389384 114389786 -136298068 - MLT1D LTR MaLR 0 505 91 2555 142 56 7 chr2 114389807 114390215 -136297639 - MSTA LTR MaLR 0 428 1 261 305 12 0 chr2 114390229 114390311 -136297543 + L2 LINE L2 2260 2342 -972 304 292 53 0 chr2 114390545 114390658 -136297196 + L2 LINE L2 3184 3302 -11 2090 127 0 20 chr2 114390688 114390987 -136296867 + AluSx SINE Alu 11 303 -9 626 262 46 34 chr2 114391011 114391248 -136296606 - L1ME4a LINE L1 -296 5825 5586 1661 242 56 56 chr2 114391410 114391842 -136296012 + MER21B LTR ERV1 1 435 -428 5055 139 3 7 chr2 114391842 114392567 -136295287 - MER72 LTR ERV1 0 722 1 1661 242 56 56 chr2 114392567 114392671 -136295183 + MER21B LTR ERV1 434 537 -326 368 254 119 0 chr2 114392725 114392859 -136294995 - LTR8A LTR ERV1 -98 629 480 2334 109 0 0 chr2 114392916 114393220 -136294634 + AluSx SINE Alu 2 305 -7 1898 169 72 0 chr2 114393306 114393638 -136294216 + MER46B DNA MER2_type 4 234 -2 2177 107 3 0 chr2 114393702 114393993 -136293861 + AluSx SINE Alu 1 292 -20 1633 184 13 38 chr2 114394002 114394318 -136293536 - MLT1A1 LTR MaLR -56 309 2 1255 245 96 26 chr2 114394320 114394736 -136293118 + MARNA DNA Mariner 127 571 -15 248 263 60 11 chr2 114394798 114394925 -136292929 - MIR SINE MIR -73 189 17 2381 61 0 45 chr2 114395296 114395608 -136292246 + AluY SINE Alu 1 298 -13 1671 181 135 11 chr2 114396352 114396701 -136291153 - MSTD LTR MaLR 0 396 5 525 231 128 31 chr2 114396715 114396910 -136290944 + MER102a DNA MER1_type 114 327 -3 386 156 13 115 chr2 114397464 114397585 -136290269 + MLT1H LTR MaLR 34 171 -378 855 200 0 51 chr2 114397616 114397791 -136290063 + MER63A DNA MER1_type 44 209 -1 320 229 183 53 chr2 114397957 114398088 -136289766 + MLT1H1 LTR MaLR 378 525 -30 2214 106 3 10 chr2 114398088 114398390 -136289464 - AluSg SINE Alu -10 300 1 427 279 127 30 chr2 114398422 114398689 -136289165 - L1ME4a LINE L1 -531 5590 5281 1036 194 20 63 chr2 114399186 114399438 -136288416 + L1MD3 LINE L1 7750 7990 -5 2020 91 3 62 chr2 114399703 114400010 -136287844 - AluSx SINE Alu -23 289 1 273 245 58 65 chr2 114400999 114401154 -136286700 - MIR SINE MIR -9 253 100 189 0 0 0 chr2 114401154 114401175 -136286679 + (TTC)n Simple_repeat Simple_repeat 2 22 0 1595 136 101 12 chr2 114401177 114401434 -136286420 - AluSx SINE Alu -20 292 13 278 243 301 0 chr2 114402424 114402527 -136285327 + L2 LINE L2 3180 3313 0 459 117 0 104 chr2 114402556 114402633 -136285221 - AluS SINE Alu -248 70 2 2241 96 3 0 chr2 114402694 114402987 -136284867 - AluSx SINE Alu -18 294 1 1660 216 8 55 chr2 114403198 114403499 -136284355 + L1M4 LINE L1 4902 5175 -971 2337 91 7 7 chr2 114403499 114403806 -136284048 + AluSp SINE Alu 1 307 -6 1660 216 8 55 chr2 114403806 114403976 -136283878 + L1M4 LINE L1 5175 5351 -795 413 157 0 12 chr2 114403997 114404080 -136283774 + GA-rich Low_complexity Low_complexity 2 83 0 285 291 142 39 chr2 114404224 114404351 -136283503 - MIR3 SINE MIR -25 183 44 31 26 0 0 chr2 114404830 114404868 -136282986 + AT_rich Low_complexity Low_complexity 1 38 0 936 267 31 80 chr2 114404882 114405271 -136282583 - L1ME4a LINE L1 -30 6091 5739 2205 123 0 0 chr2 114405271 114405580 -136282274 + AluSg SINE Alu 1 309 -1 936 267 31 80 chr2 114405580 114405775 -136282079 - L1ME4a LINE L1 -382 5739 5536 2366 100 0 0 chr2 114405789 114406089 -136281765 + AluSg SINE Alu 1 300 -10 245 194 0 15 chr2 114406089 114406156 -136281698 + (TG)n Simple_repeat Simple_repeat 2 67 0 580 287 37 18 chr2 114406199 114406363 -136281491 - MLT1J2 LTR MaLR -8 442 276 434 162 72 10 chr2 114406435 114406542 -136281312 - MLT1J2 LTR MaLR -300 147 38 1939 149 114 63 chr2 114406944 114407374 -136280480 - LTR47A LTR ERVL 0 452 1 1981 81 12 0 chr2 114407571 114407819 -136280035 + AluSp SINE Alu 1 251 -62 774 268 114 58 chr2 114408603 114408980 -136278874 - LTR16A LTR ERVL -1 449 52 1043 93 0 39 chr2 114409360 114409579 -136278275 + (TTTC)n Simple_repeat Simple_repeat 1 390 0 237 163 0 0 chr2 114410080 114410123 -136277731 + L2 LINE L2 3264 3306 -7 189 0 111 0 chr2 114410149 114410185 -136277669 + T-rich Low_complexity Low_complexity 2 41 0 1998 128 4 0 chr2 114410194 114410475 -136277379 - AluSc SINE Alu -27 282 1 235 259 19 0 chr2 114410588 114410642 -136277212 + L2 LINE L2 2922 2976 -337 2272 107 0 10 chr2 114410961 114411270 -136276584 + AluSx SINE Alu 1 306 -6 819 221 125 5 chr2 114411567 114411775 -136276079 - MIR SINE MIR -1 261 29 215 61 30 0 chr2 114412661 114412694 -136275160 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 281 120 16 0 chr2 114413025 114413080 -136274774 - MLT2D LTR ERVL 0 414 376 379 177 21 10 chr2 114413080 114413176 -136274678 + (CATA)n Simple_repeat Simple_repeat 4 100 0 1750 194 121 32 chr2 114413181 114413619 -136274235 - MLT2B1 LTR ERVL -41 479 3 345 47 0 0 chr2 114413741 114413784 -136274070 + (CA)n Simple_repeat Simple_repeat 2 44 0 606 102 45 0 chr2 114413974 114414062 -136273792 - L1PA8 LINE L1 -4 6168 6077 420 294 31 21 chr2 114414529 114414674 -136273180 + MIR SINE MIR 19 164 -67 336 292 112 37 chr2 114415613 114415774 -136272080 + MIR3 SINE MIR 15 187 -21 665 295 98 30 chr2 114416944 114417178 -136270676 + MIR SINE MIR 3 252 -10 899 257 70 82 chr2 114417605 114418018 -136269836 - MLT1I LTR MaLR 0 409 2 271 267 99 30 chr2 114418190 114418291 -136269563 - MIR SINE MIR -74 188 81 475 238 133 7 chr2 114420731 114420897 -136266957 - MIR SINE MIR -61 201 25 246 306 35 0 chr2 114420880 114420965 -136266889 + L2 LINE L2 3226 3313 0 * 2513 160 89 19 chr2 114420990 114421471 -136266383 - MLT2B2 LTR ERVL 0 515 1 289 274 20 65 chr2 114421957 114422158 -136265696 + MLT1J2 LTR MaLR 259 450 0 354 300 58 0 chr2 114422964 114423084 -136264770 - L2 LINE L2 -7 3306 3180 710 153 53 0 chr2 114423422 114423553 -136264301 - Charlie4 DNA MER1_type -6 1955 1818 1592 311 70 9 chr2 114423788 114424427 -136263427 - MER20B DNA MER1_type 0 783 106 207 0 0 0 chr2 114424551 114424574 -136263280 + (TG)n Simple_repeat Simple_repeat 1 23 0 226 164 36 0 chr2 114424578 114424633 -136263221 + GA-rich Low_complexity Low_complexity 2 58 0 200 35 35 0 chr2 114424716 114424745 -136263109 + (GAAAA)n Simple_repeat Simple_repeat 3 32 0 273 214 0 0 chr2 114425058 114425114 -136262740 + tRNA-Ile-ATT tRNA tRNA 1 56 -21 1570 210 10 7 chr2 114425296 114425601 -136262253 + L1MD2 LINE L1 6030 6335 -24 1025 219 84 92 chr2 114426311 114426389 -136261465 + MLT1C LTR MaLR 6 83 -307 2085 117 0 7 chr2 114426389 114426714 -136261140 + AluSx SINE Alu 1 312 0 1025 219 84 92 chr2 114426714 114427022 -136260832 + MLT1C LTR MaLR 83 390 0 227 254 0 63 chr2 114427023 114427086 -136260768 - MER103 DNA DNA -47 119 61 445 266 175 7 chr2 114427179 114427322 -136260532 - MER5A DNA MER1_type -10 179 13 246 272 76 11 chr2 114427761 114427853 -136260001 + MLT1J LTR MaLR 402 499 -12 235 368 105 18 chr2 114428823 114428994 -136258860 - MIR3 SINE MIR -7 201 16 1730 140 30 4 chr2 114429318 114429589 -136258265 - L1PA10 LINE L1 -4 6164 5887 1883 57 0 0 chr2 114429788 114430018 -136257836 - L1PA10 LINE L1 -265 5903 5674 3199 172 14 58 chr2 114430031 114430671 -136257183 - LTR9 LTR ERV1 0 612 1 372 318 171 0 chr2 114430672 114430842 -136257012 - MIR SINE MIR -53 209 11 4054 145 19 62 chr2 114431498 114432220 -136255634 - LTR8 LTR ERV1 0 691 1 4052 150 88 14 chr2 114432487 114433105 -136254749 + MER72 LTR ERV1 5 678 -44 2322 113 7 0 chr2 114433105 114433414 -136254440 + AluSq SINE Alu 1 311 -2 4052 150 88 14 chr2 114433414 114433463 -136254391 + MER72 LTR ERV1 678 722 0 2634 184 8 8 chr2 114433534 114434049 -136253805 + L1MA9 LINE L1 5762 6276 -36 2204 137 64 19 chr2 114435228 114435587 -136252267 - THE1C LTR MaLR 0 375 1 312 280 37 28 chr2 114436368 114436475 -136251379 + L1MC4 LINE L1 7914 8021 -21 1991 120 3 3 chr2 114436632 114436961 -136250893 - AluSx SINE Alu 0 329 1 501 200 0 0 chr2 114437501 114437596 -136250258 - AluJo SINE Alu -4 308 214 993 103 15 0 chr2 114437604 114437740 -136250114 - AluJo SINE Alu -161 151 14 2454 223 60 16 chr2 114438549 114439221 -136248633 + Charlie1a DNA MER1_type 6 706 -749 1881 169 79 39 chr2 114439217 114439709 -136248145 + Charlie1a DNA MER1_type 918 1429 -26 * 1037 151 90 1 chr2 114439709 114439887 -136247967 + L1MA8 LINE L1 5691 5931 -258 1610 147 27 62 chr2 114439887 114440236 -136247618 - AluJo SINE Alu 0 339 1 1037 151 90 1 chr2 114440236 114440313 -136247541 + L1MA8 LINE L1 5931 6000 -189 890 121 55 22 chr2 114440327 114440509 -136247345 + L1MA8 LINE L1 6100 6287 -4 289 282 14 0 chr2 114440925 114440996 -136246858 + L2 LINE L2 3201 3272 0 295 288 0 0 chr2 114440996 114441069 -136246785 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 362 336 40 8 chr2 114441769 114441894 -136245960 - L2 LINE L2 -10 3262 3134 251 341 63 67 chr2 114442651 114442906 -136244948 - L2 LINE L2 -45 3227 2974 180 235 39 0 chr2 114443038 114443089 -136244765 - L3 LINE CR1 -1315 262 210 2100 113 3 10 chr2 114443236 114443545 -136244309 - AluSq SINE Alu -6 307 1 411 274 89 24 chr2 114443945 114444113 -136243741 + LTR33 LTR ERVL 20 198 -323 231 308 115 28 chr2 114444204 114444386 -136243468 + LTR33 LTR ERVL 324 521 0 1340 224 8 53 chr2 114445002 114445377 -136242477 + MLT1A1 LTR MaLR 8 365 0 811 239 6 22 chr2 114445742 114445922 -136241932 - MER45A DNA AcHobo 0 178 2 233 310 35 9 chr2 114447077 114447190 -136240664 + LTR67 LTR ERVL 428 543 -14 3615 16 0 0 chr2 114447684 114448196 -136239658 - L1P1 LINE L1 -702 5453 4942 8090 26 0 0 chr2 114448197 114449192 -136238662 + L1P1 LINE L1 3936 4930 -1216 323 326 26 11 chr2 114449866 114450056 -136237798 + MLT1I LTR MaLR 134 326 -83 294 297 36 27 chr2 114451129 114451240 -136236614 + MIR3 SINE MIR 86 197 -11 381 261 65 0 chr2 114452027 114452119 -136235735 + MIR SINE MIR 86 183 -79 5961 59 24 0 chr2 114453035 114453834 -136234020 - L1PA8 LINE L1 -1 6171 5354 196 284 123 12 chr2 114454483 114454564 -136233290 - L3 LINE CR1 -80 1497 1408 556 322 146 26 chr2 114456314 114456984 -136230870 - L2 LINE L2 0 3313 2555 1907 136 3 7 chr2 114457702 114457989 -136229865 + AluJo SINE Alu 13 298 -14 2336 92 3 3 chr2 114458380 114458685 -136229169 + AluY SINE Alu 1 305 -6 273 231 22 22 chr2 114458918 114459009 -136228845 + MARNA DNA Mariner 316 406 -180 2227 105 3 13 chr2 114459178 114459491 -136228363 - AluSx SINE Alu -2 310 1 4076 75 2 6 chr2 114460203 114460739 -136227115 - L1PA13 LINE L1 -19 6144 5611 409 238 38 0 chr2 114460944 114461049 -136226805 - MER74B LTR ERVL -67 555 447 2031 133 3 3 chr2 114461050 114461359 -136226495 + AluSx SINE Alu 1 309 -3 742 247 27 38 chr2 114461436 114461699 -136226155 - MER74A LTR ERVL -318 240 22 201 307 156 34 chr2 114462913 114463151 -136224703 + L2 LINE L2 1710 1976 -1338 415 318 53 53 chr2 114463715 114463960 -136223894 + L2 LINE L2 3027 3271 -1 1864 125 10 30 chr2 114464527 114464830 -136223024 - AluJb SINE Alu -15 297 1 1609 159 16 9 chr2 114465837 114466152 -136221702 - L1MA6 LINE L1 -1 6299 5983 369 256 100 50 chr2 114466441 114466601 -136221253 - MIR SINE MIR -36 226 59 368 294 57 57 chr2 114466946 114467140 -136220714 - MIR3 SINE MIR -2 206 13 216 67 0 0 chr2 114468144 114468174 -136219680 + (TAA)n Simple_repeat Simple_repeat 3 32 0 202 317 106 39 chr2 114469007 114469111 -136218743 - MIR SINE MIR -67 141 31 335 22 22 0 chr2 114469262 114469308 -136218546 - MADE1 DNA Mariner -7 73 27 1841 161 7 4 chr2 114469584 114469864 -136217990 + AluJb SINE Alu 9 289 -23 214 277 96 21 chr2 114470561 114470655 -136217199 + MIR SINE MIR 106 206 -56 1722 203 45 43 chr2 114473110 114473599 -136214255 + MLT1D LTR MaLR 8 497 -8 351 268 55 0 chr2 114474389 114474516 -136213338 - MER94 DNA DNA 0 134 1 253 269 0 0 chr2 114474649 114474727 -136213127 + L1M LINE L1 5291 5368 -932 192 77 0 0 chr2 114475098 114475124 -136212730 + (TATATG)n Simple_repeat Simple_repeat 1 26 0 1179 117 0 0 chr2 114475126 114475306 -136212548 + (TA)n Simple_repeat Simple_repeat 1 180 0 978 85 30 12 chr2 114475501 114475665 -136212189 + L1P5 LINE L1 5561 5727 -429 726 103 81 22 chr2 114475663 114475799 -136212055 - L1PB4 LINE L1 -298 5858 5715 * 3286 269 17 28 chr2 114475822 114476900 -136210954 - L1PA15-16 LINE L1 -5547 1302 9 390 271 83 56 chr2 114477196 114477340 -136210514 + MIR SINE MIR 4 151 -111 3748 229 47 35 chr2 114477342 114478458 -136209396 + L1MB7 LINE L1 1 1129 -5413 * 4998 160 38 24 chr2 114478440 114480313 -136207541 + L1MA7 LINE L1 4389 6291 0 4147 249 51 18 chr2 114480349 114483235 -136204619 + L1MB7 LINE L1 1101 4177 -2467 * 28579 38 1 1 chr2 114483233 114489340 -136198514 + L1PA3 LINE L1 51 6155 0 1155 201 56 7 chr2 114489352 114489655 -136198199 + L1MB7 LINE L1 4161 4478 -2166 384 177 63 0 chr2 114489659 114489738 -136198116 + MLT1D LTR MaLR 5 88 -417 847 219 13 9 chr2 114489738 114489966 -136197888 + L1M4 LINE L1 2347 2575 -3571 1433 263 92 5 chr2 114489970 114490350 -136197504 + MLT1D LTR MaLR 93 505 0 2301 214 21 19 chr2 114490355 114490563 -136197291 + L1MB7 LINE L1 4479 4685 -1959 2341 101 0 0 chr2 114490563 114490860 -136196994 + AluY SINE Alu 1 297 -14 2301 214 21 19 chr2 114490860 114491166 -136196688 + L1MB7 LINE L1 4685 4994 -1650 * 3859 160 30 63 chr2 114491143 114491931 -136195923 + L1MC1 LINE L1 1 762 -5664 6055 155 33 9 chr2 114491932 114493003 -136194851 + L1MC1 LINE L1 5517 6613 0 4679 191 33 11 chr2 114492991 114493701 -136194153 + L1MB7 LINE L1 4750 5443 -1021 * 1560 110 0 9 chr2 114493701 114493919 -136193935 + AluSc SINE Alu 94 309 0 4679 191 33 11 chr2 114493919 114494866 -136192988 + L1MB7 LINE L1 5443 6445 -19 195 184 0 0 chr2 114494985 114495023 -136192831 + (TGG)n Simple_repeat Simple_repeat 1 38 0 259 200 14 29 chr2 114496295 114496365 -136191489 + CT-rich Low_complexity Low_complexity 5 73 0 314 98 20 0 chr2 114496366 114496417 -136191437 + (TA)n Simple_repeat Simple_repeat 2 53 0 441 190 78 62 chr2 114496593 114496764 -136191090 - Charlie7 DNA MER1_type -2 2610 2434 1071 222 32 5 chr2 114496764 114496980 -136190874 - MER58A DNA MER1_type -2 222 1 213 213 0 0 chr2 114497438 114497485 -136190369 + (TG)n Simple_repeat Simple_repeat 2 48 0 2114 111 0 0 chr2 114497531 114497802 -136190052 + AluSx SINE Alu 21 291 -21 266 341 85 8 chr2 114498294 114498423 -136189431 + MIR SINE MIR 111 249 -13 932 313 32 26 chr2 114499082 114499459 -136188395 + MLT1I LTR MaLR 21 399 -10 306 274 67 73 chr2 114499742 114499921 -136187933 - MIR SINE MIR 0 262 85 267 218 163 41 chr2 114502219 114502366 -136185488 + L1ME4a LINE L1 5955 6119 -2 250 299 95 54 chr2 114502473 114502620 -136185234 - MIR SINE MIR -48 214 62 1958 101 0 40 chr2 114503412 114503690 -136184164 - AluSx SINE Alu -45 267 1 2406 180 120 2 chr2 114504004 114504455 -136183399 - MLT1D LTR MaLR -1 504 1 388 267 112 57 chr2 114505010 114505500 -136182354 + L1ME4a LINE L1 5542 6058 -63 1959 169 6 0 chr2 114505509 114505823 -136182031 + MLT1A1 LTR MaLR 49 364 -1 522 262 113 7 chr2 114505956 114506097 -136181757 - MIR SINE MIR 0 262 107 2003 150 7 3 chr2 114506447 114506753 -136181101 + AluSx SINE Alu 1 307 -5 220 286 0 0 chr2 114507555 114507611 -136180243 + GA-rich Low_complexity Low_complexity 2 57 0 270 183 39 19 chr2 114507611 114507715 -136180139 + (ATGGTG)n Simple_repeat Simple_repeat 3 108 0 244 200 7 129 chr2 114508153 114508293 -136179561 + L1ME4a LINE L1 5997 6119 -2 211 311 86 88 chr2 114508547 114508990 -136178864 - L2 LINE L2 -5 3267 2826 2023 238 52 41 chr2 114509077 114509313 -136178541 + MER92C LTR ERV1 21 112 -300 1812 199 76 31 chr2 114509313 114509636 -136178218 - MLT1C LTR MaLR 0 467 117 2259 120 3 0 chr2 114509636 114509935 -136177919 - AluSg SINE Alu -10 300 1 1812 199 76 31 chr2 114509935 114510058 -136177796 - MLT1C LTR MaLR -350 117 1 2023 238 52 41 chr2 114510058 114510363 -136177491 + MER92C LTR ERV1 112 412 0 264 328 39 16 chr2 114510458 114510586 -136177268 + LTR16A1 LTR ERVL 1 131 -326 2512 56 0 0 chr2 114512083 114512385 -136175469 + AluY SINE Alu 1 302 -9 1815 213 17 50 chr2 114513057 114513517 -136174337 - MER65A LTR ERV1 0 445 1 197 288 56 48 chr2 114514547 114514672 -136173182 + L2 LINE L2 3188 3313 0 342 316 89 6 chr2 114516573 114516741 -136171113 + L1ME4a LINE L1 5783 5964 -157 280 304 59 0 chr2 114517248 114517350 -136170504 - MIR SINE MIR -19 243 136 624 333 129 19 chr2 114518134 114518599 -136169255 + L3 LINE CR1 1049 1564 -13 238 257 38 76 chr2 114518769 114518874 -136168980 + MIR SINE MIR 57 157 -105 192 97 0 0 chr2 114519726 114519757 -136168097 + (TG)n Simple_repeat Simple_repeat 1 31 0 183 346 31 55 chr2 114520172 114520299 -136167555 + MIR SINE MIR 28 151 -111 34 24 0 0 chr2 114520459 114520500 -136167354 + AT_rich Low_complexity Low_complexity 1 41 0 30 45 0 0 chr2 114521048 114521092 -136166762 + AT_rich Low_complexity Low_complexity 1 44 0 220 281 78 0 chr2 114521397 114521461 -136166393 - L2 LINE L2 -17 3255 3187 1952 127 0 77 chr2 114521523 114521862 -136165992 - AluSq SINE Alu 0 313 1 441 36 0 0 chr2 114521877 114521932 -136165922 + (TG)n Simple_repeat Simple_repeat 2 56 0 22 0 0 0 chr2 114522353 114522375 -136165479 + AT_rich Low_complexity Low_complexity 1 22 0 690 171 0 49 chr2 114522377 114522478 -136165376 - FLAM_C SINE Alu -194 118 22 3640 158 52 19 chr2 114522478 114523093 -136164761 + MER41B LTR ERV1 1 635 0 690 171 0 49 chr2 114523093 114523114 -136164740 - FLAM_C SINE Alu -290 22 2 27 0 0 0 chr2 114523493 114523520 -136164334 + AT_rich Low_complexity Low_complexity 1 27 0 706 248 77 61 chr2 114523879 114524190 -136163664 - L2 LINE L2 -100 3213 2898 577 296 104 28 chr2 114524219 114524574 -136163280 + LTR16A LTR ERVL 65 446 -4 2153 246 98 17 chr2 114524579 114524643 -136163211 - L2 LINE L2 -445 2869 2812 2398 87 13 0 chr2 114524643 114524943 -136162911 - AluSx SINE Alu -8 304 1 2153 246 98 17 chr2 114524943 114525570 -136162284 - L2 LINE L2 -502 2812 2122 275 48 0 24 chr2 114526395 114526437 -136161417 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 7484 35 1 0 chr2 114526437 114527532 -136160322 - L1PA4 LINE L1 -24 6131 5036 399 211 174 68 chr2 114527532 114527693 -136160161 - MER5A DNA MER1_type 0 189 12 732 201 47 24 chr2 114528126 114528295 -136159559 - MER5B DNA MER1_type -1 177 5 961 101 6 22 chr2 114528682 114528861 -136158993 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 255 344 64 25 chr2 114530002 114530159 -136157695 - MLT1H LTR MaLR -131 418 256 * 2058 188 11 5 chr2 114530155 114530533 -136157321 - MLT1B LTR MaLR -10 380 1 199 379 48 29 chr2 114533692 114533898 -136153956 - L2 LINE L2 -576 2738 2529 740 316 27 9 chr2 114534428 114534653 -136153201 + MIR SINE MIR 25 253 -9 1626 167 3 53 chr2 114535315 114535638 -136152216 - AluJo SINE Alu -5 307 1 197 347 0 0 chr2 114535839 114535911 -136151943 + MIR SINE MIR 19 90 -118 940 247 27 9 chr2 114537110 114537329 -136150525 + MIR SINE MIR 13 235 -27 494 119 12 0 chr2 114538042 114538126 -136149728 + (TGGA)n Simple_repeat Simple_repeat 1 85 0 591 116 0 0 chr2 114539920 114540006 -136147848 + L1MA9 LINE L1 6163 6248 -64 741 172 33 26 chr2 114540008 114540159 -136147695 + FRAM SINE Alu 1 152 -24 233 62 0 225 chr2 114540163 114540243 -136147611 + L1MA9 LINE L1 6250 6311 -1 1365 106 11 0 chr2 114540254 114540433 -136147421 + AluSq SINE Alu 5 185 -128 1217 238 94 12 chr2 114541051 114541392 -136146462 + MLT1A2 LTR MaLR 6 374 0 412 280 11 0 chr2 114541392 114541485 -136146369 - MIR SINE MIR -106 156 63 1500 274 22 43 chr2 114542324 114542770 -136145084 - MER70A LTR ERVL -32 440 4 1523 185 74 25 chr2 114543206 114543530 -136144324 + MER2 DNA MER2_type 1 340 -5 447 273 79 0 chr2 114543543 114543682 -136144172 - MIR SINE MIR -111 151 2 219 286 11 106 chr2 114544177 114544366 -136143488 - MIR SINE MIR -33 229 59 448 234 184 7 chr2 114544576 114544717 -136143137 + MER5A DNA MER1_type 22 187 -2 1697 216 56 22 chr2 114545507 114545952 -136141902 + MLT1C LTR MaLR 7 466 -1 402 247 126 32 chr2 114545975 114546165 -136141689 - MIR SINE MIR -7 255 48 791 194 114 30 chr2 114546914 114547115 -136140739 - MER20 DNA MER1_type 0 219 2 1783 181 0 17 chr2 114547461 114547753 -136140101 + AluJo SINE Alu 1 287 -25 6551 131 12 33 chr2 114548427 114549950 -136137904 + L1PB1 LINE L1 4106 5572 -579 1994 129 0 0 chr2 114549950 114550213 -136137641 + AluSx SINE Alu 3 265 -47 6551 131 12 33 chr2 114550213 114550781 -136137073 + L1PB1 LINE L1 5572 6151 0 2953 144 65 7 chr2 114550899 114551449 -136136405 + L1MB2 LINE L1 5588 6169 -2 4641 94 31 11 chr2 114551774 114552421 -136135433 - PABL_A LTR ERV1 0 660 1 2446 178 43 41 chr2 114552885 114553442 -136134412 - MER74A LTR ERVL 0 558 1 234 295 13 13 chr2 114554118 114554196 -136133658 + CT-rich Low_complexity Low_complexity 2 79 0 1828 137 3 52 chr2 114554938 114555270 -136132584 - AluJo SINE Alu 0 312 1 224 151 0 19 chr2 114555410 114555463 -136132391 + GA-rich Low_complexity Low_complexity 2 53 0 24 0 0 0 chr2 114556004 114556028 -136131826 + AT_rich Low_complexity Low_complexity 1 24 0 251 328 115 26 chr2 114556356 114556774 -136131080 + L1ME LINE L1 5330 5784 -337 922 246 103 25 chr2 114556774 114557055 -136130799 + MLT1G LTR MaLR 1 303 -287 456 266 73 34 chr2 114557086 114557263 -136130591 + MLT1G LTR MaLR 379 562 -5 940 114 0 0 chr2 114558626 114558758 -136129096 - MER58 DNA MER1_type -2 2418 2287 241 267 40 67 chr2 114558766 114558841 -136129013 - MER58 DNA MER1_type -2345 75 3 2333 106 0 0 chr2 114558972 114559283 -136128571 - AluY SINE Alu 0 311 1 2244 142 0 11 chr2 114559711 114559937 -136127917 - L1PA13 LINE L1 -4 6159 5937 532 113 0 12 chr2 114559937 114560017 -136127837 + MADE1 DNA Mariner 1 79 -1 2244 142 0 11 chr2 114560017 114560142 -136127712 - L1PA13 LINE L1 -226 5937 5812 616 271 33 73 chr2 114560309 114560582 -136127272 - MLT1J LTR MaLR -249 262 1 301 286 151 8 chr2 114560585 114560711 -136127143 - MIR SINE MIR -102 160 17 1806 194 42 2 chr2 114560905 114561307 -136126547 + L1MB8 LINE L1 5747 6164 -14 212 265 0 0 chr2 114561503 114561552 -136126302 + GA-rich Low_complexity Low_complexity 1 49 0 2879 70 3 11 chr2 114562417 114562811 -136125043 + L1PA8 LINE L1 5782 6172 0 2362 177 38 13 chr2 114563074 114563527 -136124327 - MLT2C2 LTR ERVL 0 464 1 261 284 12 0 chr2 114563574 114563655 -136124199 + L2 LINE L2 3229 3310 -3 745 259 104 36 chr2 114563798 114564134 -136123720 + L1MC4a LINE L1 5619 5977 -1831 588 231 61 29 chr2 114565081 114565405 -136122449 - MLT1I LTR MaLR 0 409 28 2058 131 3 0 chr2 114565461 114565775 -136122079 - AluSx SINE Alu 0 315 1 265 264 8 72 chr2 114566089 114566214 -136121640 - MIR3 SINE MIR -15 193 77 2398 77 0 13 chr2 114566246 114566556 -136121298 - AluY SINE Alu -5 306 1 344 132 0 0 chr2 114566563 114566616 -136121238 + MLT1E1 LTR MaLR 599 651 -3 44717 42 2 2 chr2 114566864 114573037 -136114817 + L1PA3 LINE L1 3 6178 0 2819 173 72 2 chr2 114573541 114574055 -136113799 + MER44D DNA MER2_type 1 605 0 516 309 20 15 chr2 114574305 114574506 -136113348 + MIR SINE MIR 42 243 -19 2060 113 7 14 chr2 114574512 114574805 -136113049 + AluSg SINE Alu 1 291 -19 1432 184 0 60 chr2 114574842 114575029 -136112825 - AluJo SINE Alu -5 307 141 1858 152 0 20 chr2 114575029 114575325 -136112529 - AluJb SINE Alu -22 290 1 1432 184 0 60 chr2 114575325 114575420 -136112434 - AluJo SINE Alu -171 141 42 806 252 93 33 chr2 114577366 114577917 -136109937 + L2 LINE L2 2562 3161 -152 2142 149 9 11 chr2 114577917 114578265 -136109589 - MER7A DNA MER2_type -1 345 1 806 252 93 33 chr2 114578265 114578295 -136109559 + L2 LINE L2 3161 3188 -125 277 296 119 28 chr2 114578693 114578869 -136108985 - MIR SINE MIR -60 202 11 217 318 23 39 chr2 114579396 114579525 -136108329 + MIR SINE MIR 4 130 -78 23 0 0 0 chr2 114579528 114579551 -136108303 + AT_rich Low_complexity Low_complexity 1 23 0 5009 100 14 11 chr2 114579551 114580272 -136107582 - L1PB1 LINE L1 -1 6150 5428 182 232 71 0 chr2 114580274 114580330 -136107524 + MIR SINE MIR 130 189 -73 1053 199 9 5 chr2 114580333 114580549 -136107305 + U3 snRNA snRNA 1 217 0 420 247 0 0 chr2 114581317 114581403 -136106451 + MER33 DNA MER1_type 34 119 -205 2247 189 32 0 chr2 114581403 114581805 -136106049 - MSTB LTR MaLR 0 426 12 490 166 0 116 chr2 114581824 114581882 -136105972 + MER33 DNA MER1_type 129 192 -2393 2180 86 17 36 chr2 114581882 114582183 -136105671 + AluSq SINE Alu 1 295 -18 490 166 0 116 chr2 114582183 114582305 -136105549 + MER33 DNA MER1_type 192 288 -36 242 358 157 0 chr2 114582378 114582512 -136105342 + L2 LINE L2 3117 3271 -1 1955 161 108 20 chr2 114582654 114582852 -136105002 + MSTB1 LTR MaLR 1 180 -252 231 36 0 0 chr2 114582852 114582880 -136104974 + (TC)n Simple_repeat Simple_repeat 2 29 0 300 70 0 0 chr2 114582881 114582924 -136104930 + (CA)n Simple_repeat Simple_repeat 2 44 0 1955 161 108 20 chr2 114582924 114583120 -136104734 + MSTB1 LTR MaLR 179 432 0 467 214 0 0 chr2 114583275 114583364 -136104490 + MER5A DNA MER1_type 17 105 -84 1674 174 7 13 chr2 114584280 114584584 -136103270 + AluJb SINE Alu 1 302 -10 445 264 85 0 chr2 114585110 114585286 -136102568 - MIR SINE MIR -34 228 37 193 321 214 6 chr2 114587277 114587445 -136100409 + L2 LINE L2 1632 1834 -1480 402 324 40 12 chr2 114587656 114587829 -136100025 + MLT1J1 LTR MaLR 128 305 -141 2377 276 44 8 chr2 114587829 114588626 -136099228 + L1M4b LINE L1 110 981 -5878 381 284 112 44 chr2 114588621 114588992 -136098862 + L1M2a LINE L1 1 1196 -5902 * 309 283 0 76 chr2 114589015 114589160 -136098694 + L1M2a LINE L1 1546 1679 -5489 7549 142 32 12 chr2 114589161 114590046 -136097808 + ERVL-B3 LTR ERVL 4526 5443 -321 2253 63 0 0 chr2 114590046 114590314 -136097540 + L1PA5 LINE L1 5879 6146 -8 7549 142 32 12 chr2 114590314 114590636 -136097218 + ERVL-B3 LTR ERVL 5443 5757 -7 2828 189 24 12 chr2 114590636 114590856 -136096998 + MLT2B3 LTR ERVL 1 217 -337 312 48 0 0 chr2 114590856 114590898 -136096956 + (TC)n Simple_repeat Simple_repeat 2 43 0 2828 189 24 12 chr2 114590898 114591179 -136096675 + MLT2B3 LTR ERVL 217 508 -46 301 146 0 0 chr2 114591220 114591268 -136096586 + MLT2B3 LTR ERVL 465 512 -8 2190 167 31 31 chr2 114591269 114591719 -136096135 + L1MB8 LINE L1 5454 5903 -281 1044 172 108 0 chr2 114591719 114591922 -136095932 + MSTC LTR MaLR 1 225 -203 412 217 170 0 chr2 114591947 114592053 -136095801 + MSTC LTR MaLR 102 225 -203 1321 176 115 10 chr2 114592078 114592374 -136095480 + MSTC LTR MaLR 102 428 0 1198 206 29 18 chr2 114592374 114592651 -136095203 + L1MB8 LINE L1 5899 6178 0 2499 68 0 7 chr2 114592861 114593169 -136094685 - AluY SINE Alu -5 306 1 1460 257 81 42 chr2 114593324 114594012 -136093842 - HAL1 LINE L1 -1313 1194 480 437 352 25 5 chr2 114594041 114594237 -136093617 + L2 LINE L2 1823 2022 -1292 597 332 90 12 chr2 114594282 114594855 -136092999 + L2 LINE L2 2696 3313 0 507 266 101 13 chr2 114595530 114595688 -136092166 + L1ME LINE L1 5598 5769 -352 635 100 0 0 chr2 114595892 114595972 -136091882 - MADE1 DNA Mariner 0 80 1 2303 80 0 3 chr2 114596351 114596660 -136091194 - AluSq SINE Alu 0 308 1 1841 186 18 66 chr2 114596694 114597087 -136090767 - MLT1A2 LTR MaLR 0 374 1 288 284 25 25 chr2 114599896 114599977 -136087877 - L2 LINE L2 -6 3266 3186 276 200 0 0 chr2 114600190 114600240 -136087614 - MER117 DNA MER1_type -33 164 115 708 274 55 31 chr2 114600244 114600536 -136087318 - L2 LINE L2 -3 3310 3012 239 146 0 0 chr2 114600556 114600597 -136087257 - MER117 DNA MER1_type -115 82 42 317 340 0 9 chr2 114600763 114600869 -136086985 + MIR3 SINE MIR 101 205 -3 236 234 0 0 chr2 114602197 114602244 -136085610 + MIR SINE MIR 98 144 -64 302 238 254 8 chr2 114602299 114602425 -136085429 + MIR SINE MIR 46 202 -60 1967 238 103 0 chr2 114602761 114603227 -136084627 - MLT1H1 LTR MaLR -41 514 1 272 274 101 82 chr2 114603549 114603768 -136084086 + L3 LINE CR1 1149 1371 -206 1081 253 66 43 chr2 114603878 114604157 -136083697 + MLT1I LTR MaLR 3 295 -114 812 152 139 0 chr2 114604157 114604322 -136083532 - MER53 DNA DNA -1 188 1 1081 253 66 43 chr2 114604322 114604434 -136083420 + MLT1I LTR MaLR 295 403 -6 279 104 0 0 chr2 114604631 114604679 -136083175 + (A)n Simple_repeat Simple_repeat 1 48 0 2200 152 12 111 chr2 114604933 114604997 -136082857 + MER65A LTR ERV1 1 70 -375 2347 84 16 7 chr2 114604997 114605306 -136082548 + AluSx SINE Alu 1 312 0 2200 152 12 111 chr2 114605306 114605735 -136082119 + MER65A LTR ERV1 70 445 0 899 138 0 0 chr2 114607077 114607207 -136080647 - AluSg/x SINE Alu -84 228 99 186 71 0 0 chr2 114608948 114608976 -136078878 + (CA)n Simple_repeat Simple_repeat 2 29 0 22 0 0 0 chr2 114609033 114609055 -136078799 + AT_rich Low_complexity Low_complexity 1 22 0 1079 276 25 0 chr2 114609345 114609667 -136078187 - LTR16A LTR ERVL 0 450 121 551 250 28 21 chr2 114610408 114610552 -136077302 + MIR SINE MIR 5 149 -113 464 200 24 48 chr2 114610665 114610790 -136077064 + MIR3 SINE MIR 87 208 0 1095 276 38 12 chr2 114613748 114614088 -136073766 + L1ME2 LINE L1 5793 6141 -23 187 303 103 62 chr2 114614575 114614720 -136073134 + L2 LINE L2 2707 2857 -457 565 309 51 17 chr2 114615338 114615574 -136072280 + MLT1L LTR MaLR 356 599 -16 423 296 132 0 chr2 114615585 114615737 -136072117 + MIR SINE MIR 75 246 -16 2121 134 13 0 chr2 114617940 114618245 -136069609 + AluSx SINE Alu 1 309 -3 2130 160 172 3 chr2 114618412 114618928 -136068926 - LTR65 LTR ERV1 -33 636 1 194 329 0 41 chr2 114619042 114619115 -136068739 + L2 LINE L2 3198 3267 -5 241 349 66 0 chr2 114621508 114621614 -136066240 + L2 LINE L2 3160 3272 0 232 250 62 0 chr2 114622319 114622367 -136065487 - L2 LINE L2 -5 3267 3217 21 36 0 0 chr2 114622867 114622895 -136064959 + AT_rich Low_complexity Low_complexity 1 28 0 319 278 44 22 chr2 114623942 114624032 -136063822 - L2 LINE L2 0 3272 3181 221 386 10 10 chr2 114625978 114626079 -136061775 - MIR3 SINE MIR -25 183 83 277 190 0 17 chr2 114626685 114626743 -136061111 + L1MC4a LINE L1 5879 5935 -1873 24 0 0 0 chr2 114629593 114629617 -136058237 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 114629759 114629784 -136058070 + AT_rich Low_complexity Low_complexity 1 25 0 815 161 0 23 chr2 114629794 114629924 -136057930 + FLAM_C SINE Alu 1 127 -16 21 26 0 26 chr2 114629924 114629938 -136057916 + AT_rich Low_complexity Low_complexity 1 14 -24 1910 141 3 20 chr2 114629938 114630237 -136057617 + AluSg SINE Alu 1 294 -16 21 26 0 26 chr2 114630237 114630261 -136057593 + AT_rich Low_complexity Low_complexity 14 38 0 337 271 69 49 chr2 114630484 114630628 -136057226 + L1MC4a LINE L1 5993 6139 -1669 4798 212 98 63 chr2 114630628 114632284 -136055570 + L1MC4 LINE L1 6163 7877 -165 1118 171 99 5 chr2 114632503 114632714 -136055140 + MER46A DNA MER2_type 6 236 0 224 333 20 10 chr2 114633058 114633157 -136054697 + (TGGG)n Simple_repeat Simple_repeat 1 100 0 22 35 0 0 chr2 114633613 114633642 -136054212 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 114634279 114634302 -136053552 + AT_rich Low_complexity Low_complexity 1 23 0 670 280 95 54 chr2 114634653 114634845 -136053009 + L1MC/D LINE L1 5399 5582 -2226 2297 120 19 45 chr2 114634845 114635219 -136052635 + THE1B LTR MaLR 1 364 0 670 280 95 54 chr2 114635219 114635389 -136052465 + L1MC/D LINE L1 5582 5780 -2028 2680 214 70 15 chr2 114635389 114636006 -136051848 - MER82 DNA MER2_type -1 652 2 670 280 95 54 chr2 114636006 114636031 -136051823 + L1MC/D LINE L1 5780 5803 -2005 1866 168 0 3 chr2 114636125 114636416 -136051438 + AluJo SINE Alu 1 290 -22 2570 71 0 0 chr2 114636582 114636892 -136050962 - AluSx SINE Alu -2 310 1 1441 261 86 45 chr2 114637019 114637538 -136050316 + HAL1 LINE L1 1740 2299 -208 1694 177 42 0 chr2 114637538 114637826 -136050028 + AluJb SINE Alu 1 300 -12 1441 261 86 45 chr2 114637826 114638025 -136049829 + HAL1 LINE L1 2299 2488 -19 1801 164 3 10 chr2 114638325 114638618 -136049236 - AluJb SINE Alu -21 291 1 1689 101 58 0 chr2 114639206 114639613 -136048241 + L1P4 LINE L1 5057 5491 -677 352 271 154 62 chr2 114639666 114639677 -136048177 + HAL1 LINE L1 2002 2011 -496 4073 111 48 12 chr2 114639677 114640341 -136047513 + L1PA13 LINE L1 5474 6161 -2 352 271 154 62 chr2 114640341 114640783 -136047071 + HAL1 LINE L1 2011 2497 -10 1973 58 0 54 chr2 114641218 114641479 -136046375 - AluY SINE Alu -22 289 43 300 343 177 30 chr2 114641657 114643005 -136044849 + L2 LINE L2 1696 3271 -1 1583 177 57 3 chr2 114644884 114645167 -136042687 + AluJo SINE Alu 3 300 -12 29 70 0 0 chr2 114645169 114645226 -136042628 + AT_rich Low_complexity Low_complexity 1 57 0 24 0 0 0 chr2 114645585 114645609 -136042245 + AT_rich Low_complexity Low_complexity 1 24 0 4524 250 88 39 chr2 114646581 114646666 -136041188 + L1MEc LINE L1 46 125 -6271 2617 33 3 0 chr2 114646666 114646970 -136040884 + AluY SINE Alu 1 305 -6 4524 250 88 39 chr2 114646970 114648582 -136039272 + L1MEc LINE L1 125 1656 -4740 2132 113 0 7 chr2 114648582 114648873 -136038981 + AluSx SINE Alu 1 289 -23 4524 250 88 39 chr2 114648873 114648896 -136038958 + L1MEc LINE L1 1656 1676 -4720 1554 156 30 121 chr2 114648896 114649325 -136038529 + MLT1B LTR MaLR 1 390 0 4524 250 88 39 chr2 114649325 114649646 -136038208 + L1MEc LINE L1 1676 2190 -4206 1834 155 3 32 chr2 114649662 114649971 -136037883 - AluJb SINE Alu -7 305 6 233 271 82 24 chr2 114650095 114650180 -136037674 + MIR SINE MIR 17 106 -156 384 220 0 10 chr2 114650264 114650364 -136037490 - MER104 DNA Tc2 -30 150 52 1992 168 33 10 chr2 114650388 114650786 -136037068 + L1MB8 LINE L1 5765 6171 -7 207 225 0 0 chr2 114651717 114651788 -136036066 + A-rich Low_complexity Low_complexity 1 71 0 2313 60 0 3 chr2 114652027 114652309 -136035545 + AluY SINE Alu 21 301 -10 2192 124 0 0 chr2 114652459 114652758 -136035096 - AluSg1 SINE Alu -10 299 1 183 235 20 20 chr2 114653053 114653104 -136034750 - MIR3 SINE MIR -14 194 144 451 352 107 0 chr2 114653669 114653885 -136033969 - L3 LINE CR1 -56 1521 1283 239 303 11 0 chr2 114654339 114654428 -136033426 - L3 LINE CR1 -295 1282 1193 225 243 105 40 chr2 114655462 114655614 -136032240 + L1M4 LINE L1 5006 5167 -979 2031 231 38 81 chr2 114655689 114656014 -136031840 + L1ME2 LINE L1 1927 2264 -3900 2039 126 7 7 chr2 114656014 114656299 -136031555 + AluSx SINE Alu 7 291 -21 2031 231 38 81 chr2 114656299 114656577 -136031277 + L1ME2 LINE L1 2264 2552 -3612 1460 172 21 14 chr2 114656577 114656856 -136030998 + AluJb SINE Alu 32 312 0 2031 231 38 81 chr2 114656856 114657211 -136030643 + L1ME2 LINE L1 2552 6095 -69 728 217 20 14 chr2 114657235 114657476 -136030378 + MER58A DNA MER1_type 21 224 0 360 303 21 37 chr2 114657571 114657759 -136030095 + L1MC4 LINE L1 7826 8010 -32 690 262 33 65 chr2 114657783 114658150 -136029704 + HAL1 LINE L1 2148 2502 -5 24 53 0 0 chr2 114658666 114658704 -136029150 + AT_rich Low_complexity Low_complexity 1 38 0 1973 209 116 37 chr2 114659152 114659177 -136028677 + MER119 DNA MER1_type 7 29 -554 1003 218 87 72 chr2 114659177 114659567 -136028287 + MSTD LTR MaLR 1 396 0 1973 209 116 37 chr2 114659567 114660076 -136027778 + MER119 DNA MER1_type 29 583 0 201 273 106 30 chr2 114660337 114660403 -136027451 - L2 LINE L2 -2 3270 3200 2447 87 0 0 chr2 114660493 114660792 -136027062 + AluSx SINE Alu 3 301 -11 1969 134 4 0 chr2 114660795 114661070 -136026784 + AluSq SINE Alu 6 281 -32 261 0 0 0 chr2 114661070 114661099 -136026755 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1844 136 0 70 chr2 114661610 114661941 -136025913 + AluJo SINE Alu 1 308 -4 2232 78 7 0 chr2 114662352 114662668 -136025186 + AluY SINE Alu 1 318 0 321 338 257 16 chr2 114662949 114664308 -136023546 + L2 LINE L2 717 2402 -912 5195 162 46 18 chr2 114664311 114665618 -136022236 + L1MA5 LINE L1 4948 6294 -6 1628 176 3 33 chr2 114665628 114665764 -136022090 + AluJo SINE Alu 1 139 -173 2230 111 3 0 chr2 114665764 114666071 -136021783 + AluSx SINE Alu 1 308 -4 1628 176 3 33 chr2 114666071 114666240 -136021614 + AluJo SINE Alu 139 297 -15 1045 241 90 66 chr2 114666412 114667014 -136020840 + L1MC5 LINE L1 7298 7913 -48 275 332 24 72 chr2 114667047 114667255 -136020599 + L2 LINE L2 2551 2748 -566 * 577 316 20 41 chr2 114667207 114667304 -136020550 - MIR SINE MIR -3 259 162 1878 177 3 6 chr2 114667304 114667615 -136020239 + AluJb SINE Alu 3 312 0 577 316 20 41 chr2 114667615 114667761 -136020093 - MIR SINE MIR -100 162 21 398 348 96 76 chr2 114667878 114668297 -136019557 + L2 LINE L2 2842 3268 -4 358 225 159 39 chr2 114668363 114668545 -136019309 + L1ME3 LINE L1 5957 6160 -2 209 250 54 0 chr2 114668547 114668603 -136019251 + GA-rich Low_complexity Low_complexity 2 60 0 28 0 0 0 chr2 114669355 114669383 -136018471 + AT_rich Low_complexity Low_complexity 1 28 0 1289 174 70 110 chr2 114670447 114670856 -136016998 + MLT1B LTR MaLR 1 465 -2 900 289 116 36 chr2 114671184 114671343 -136016511 - Tigger8 DNA MER2_type -2 664 519 2403 77 0 13 chr2 114671343 114671656 -136016198 - AluSg SINE Alu -1 309 1 900 289 116 36 chr2 114671656 114672099 -136015755 - Tigger8 DNA MER2_type -147 519 14 920 267 64 19 chr2 114672962 114673322 -136014532 + L1MC4a LINE L1 5576 5951 -1857 911 147 0 0 chr2 114673811 114673947 -136013907 + AluSq/x SINE Alu 1 136 -177 2103 111 3 19 chr2 114673947 114674254 -136013600 + AluSg SINE Alu 1 302 -8 1779 133 4 0 chr2 114674311 114674567 -136013287 + AluSx SINE Alu 44 300 -12 4208 188 66 1 chr2 114675259 114676030 -136011824 - MER21B LTR ERV1 -40 823 3 273 200 50 38 chr2 114676735 114676815 -136011039 - L1ME LINE L1 -281 5840 5760 28 48 0 0 chr2 114677489 114677531 -136010323 + AT_rich Low_complexity Low_complexity 1 42 0 2262 103 3 6 chr2 114677984 114678296 -136009558 - AluSp SINE Alu -2 311 1 1296 200 74 4 chr2 114678434 114678704 -136009150 + AluJo SINE Alu 1 289 -23 21 36 0 0 chr2 114678704 114678732 -136009122 + AT_rich Low_complexity Low_complexity 1 28 0 4625 173 50 6 chr2 114678953 114680484 -136007370 + L1MB3 LINE L1 4564 6154 -29 1922 100 0 0 chr2 114680506 114680756 -136007098 - AluSg SINE Alu -15 295 46 329 329 158 7 chr2 114680765 114681075 -136006779 + L1M4 LINE L1 4941 5297 -849 707 246 120 36 chr2 114681149 114681660 -136006194 + L1MB3 LINE L1 1322 6636 -342 258 182 100 123 chr2 114681724 114681826 -136006028 + L1M4 LINE L1 1423 1521 -5021 2182 101 0 13 chr2 114681826 114682124 -136005730 + AluY SINE Alu 1 294 -17 258 182 100 123 chr2 114682124 114682191 -136005663 + L1M4 LINE L1 1521 1588 -4954 1437 117 168 12 chr2 114682192 114682448 -136005406 + AluSg1 SINE Alu 1 296 -13 1047 160 6 0 chr2 114682451 114682620 -136005234 + AluSg/x SINE Alu 130 299 -11 436 231 98 7 chr2 114682620 114682763 -136005091 + L1M4 LINE L1 1676 1831 -4813 1238 215 56 9 chr2 114682766 114683087 -136004767 + L1MA9 LINE L1 5919 6254 -58 2154 114 3 0 chr2 114683087 114683386 -136004468 + AluSx SINE Alu 1 300 -12 771 111 48 8 chr2 114684122 114684248 -136003606 + Tigger1 DNA MER2_type 1082 1212 -1206 702 124 0 0 chr2 114684626 114684723 -136003131 - AluSp/q SINE Alu -29 284 188 1635 71 9 36 chr2 114684724 114684948 -136002906 - AluSp SINE Alu -95 218 1 196 320 205 6 chr2 114685224 114685380 -136002474 + MIR SINE MIR 12 198 -64 1133 141 22 0 chr2 114685573 114685757 -136002097 + L1MB7 LINE L1 5877 6064 -120 631 150 26 0 chr2 114685798 114685911 -136001943 + L1MB7 LINE L1 6058 6173 -11 266 317 39 0 chr2 114686188 114686292 -136001562 - L2 LINE L2 -15 3298 3191 230 270 0 87 chr2 114687079 114687194 -136000660 + MIR SINE MIR 128 232 -30 326 221 63 21 chr2 114687593 114687688 -136000166 + MIR3 SINE MIR 98 196 -12 1896 122 0 0 chr2 114688203 114688466 -135999388 + AluSx SINE Alu 45 307 -5 494 283 142 14 chr2 114689731 114689803 -135998051 - MIR SINE MIR -1 261 200 204 40 0 0 chr2 114689803 114689828 -135998026 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1643 181 17 7 chr2 114689829 114690122 -135997732 + AluJo SINE Alu 5 300 -12 494 283 142 14 chr2 114690122 114690259 -135997595 - MIR SINE MIR -61 201 23 188 278 102 37 chr2 114690383 114690491 -135997363 + MER5A DNA MER1_type 7 121 -68 * 274 239 88 44 chr2 114690407 114690520 -135997334 - MER5B DNA MER1_type -17 161 44 210 178 67 0 chr2 114690540 114690585 -135997269 - L2 LINE L2 0 3313 3266 603 250 104 17 chr2 114690613 114690812 -135997042 + MIR SINE MIR 43 262 0 2166 109 7 13 chr2 114691593 114691895 -135995959 + AluSq SINE Alu 1 300 -13 2222 93 0 0 chr2 114692393 114692711 -135995143 + AluSc SINE Alu 1 318 0 29 0 0 0 chr2 114694340 114694369 -135993485 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 114695448 114695469 -135992385 + GC_rich Low_complexity Low_complexity 1 21 0 233 273 10 30 chr2 114695914 114696013 -135991841 + C-rich Low_complexity Low_complexity 3 99 0 718 152 0 83 chr2 114696769 114696914 -135990940 + FLAM_C SINE Alu 1 133 0 682 196 30 15 chr2 114696935 114697068 -135990786 - MER5A DNA MER1_type -7 182 48 520 326 144 39 chr2 114697253 114697718 -135990136 - L2 LINE L2 0 3272 2764 552 232 129 26 chr2 114698389 114698583 -135989271 - MER102a DNA MER1_type -3 327 114 1671 181 135 11 chr2 114698597 114698946 -135988908 + MSTD LTR MaLR 5 396 0 2381 61 0 45 chr2 114699689 114700001 -135987853 - AluY SINE Alu -13 298 1 248 263 60 11 chr2 114700372 114700499 -135987355 + MIR SINE MIR 17 189 -73 1255 245 96 26 chr2 114700561 114700977 -135986877 - MARNA DNA Mariner -15 571 127 1633 184 13 38 chr2 114700979 114701295 -135986559 + MLT1A1 LTR MaLR 2 309 -56 2177 107 3 0 chr2 114701304 114701595 -135986259 - AluSx SINE Alu -20 292 1 1898 169 72 0 chr2 114701659 114701991 -135985863 - MER46B DNA MER2_type -2 234 4 2405 98 0 0 chr2 114702077 114702382 -135985472 - AluSx SINE Alu -7 305 1 410 301 174 19 chr2 114702637 114703068 -135984786 + L2 LINE L2 2768 3272 0 371 309 61 12 chr2 114703217 114703439 -135984415 + L1ME LINE L1 5421 5636 -534 285 299 51 26 chr2 114703487 114703604 -135984250 - MLT1J LTR MaLR -389 122 3 1205 258 39 85 chr2 114703651 114703794 -135984060 + MLT1J LTR MaLR 40 188 -323 1716 162 0 57 chr2 114703794 114704109 -135983745 + AluJb SINE Alu 1 297 -15 1205 258 39 85 chr2 114704109 114704295 -135983559 + MLT1J LTR MaLR 188 341 -170 2492 55 0 10 chr2 114704295 114704603 -135983251 + AluY SINE Alu 1 305 -6 1205 258 39 85 chr2 114704603 114704765 -135983089 + MLT1J LTR MaLR 341 509 -2 224 278 0 0 chr2 114705088 114705142 -135982712 + GA-rich Low_complexity Low_complexity 2 55 0 2111 101 0 0 chr2 114705142 114705409 -135982445 + AluSg SINE Alu 31 297 -13 2138 128 0 7 chr2 114705508 114705812 -135982042 - AluSg SINE Alu -5 305 4 282 269 51 13 chr2 114706473 114706551 -135981303 - MIR SINE MIR -57 151 71 1024 261 80 48 chr2 114706672 114707209 -135980645 - MLT1K LTR MaLR -2 586 15 282 252 189 27 chr2 114708195 114708306 -135979548 + MER5A DNA MER1_type 24 152 -37 685 193 34 0 chr2 114708306 114708425 -135979429 + FLAM_A SINE Alu 1 123 -19 233 265 0 0 chr2 114708427 114708476 -135979378 - MER5B DNA MER1_type -129 49 1 2321 96 6 6 chr2 114708540 114708852 -135979002 + AluSx SINE Alu 1 312 0 1277 187 4 4 chr2 114708903 114709138 -135978716 + AluJb SINE Alu 1 235 -77 432 128 15 60 chr2 114709138 114709251 -135978603 + L1MA9 LINE L1 6163 6268 -32 819 145 0 0 chr2 114709254 114709371 -135978483 + FLAM_C SINE Alu 1 117 -26 2207 91 14 0 chr2 114709610 114709906 -135977948 - AluSp SINE Alu -13 300 1 584 176 20 0 chr2 114710151 114710253 -135977601 - AluSc SINE Alu -16 293 190 657 281 271 16 chr2 114710267 114710772 -135977082 + L2 LINE L2 1357 1990 -1324 4574 176 55 8 chr2 114710892 114712352 -135975502 + L1MB3 LINE L1 4663 6183 0 1198 108 0 0 chr2 114712353 114712519 -135975335 - AluSg/x SINE Alu -14 296 131 237 167 0 0 chr2 114712570 114712618 -135975236 - L1MB5 LINE L1 0 6174 6127 25 0 0 0 chr2 114712900 114712925 -135974929 + AT_rich Low_complexity Low_complexity 1 25 0 204 243 0 0 chr2 114713088 114713162 -135974692 + (TA)n Simple_repeat Simple_repeat 2 75 0 1489 81 0 0 chr2 114713405 114713590 -135974264 + AluSg SINE Alu 1 185 -125 451 152 19 57 chr2 114714148 114714253 -135973601 - HAL1 LINE L1 -1019 1488 1388 2136 134 23 29 chr2 114714337 114714688 -135973166 - THE1B LTR MaLR -2 362 14 2676 262 65 54 chr2 114714698 114714829 -135973025 - HAL1 LINE L1 -1294 1213 1085 1640 197 3 3 chr2 114714829 114715128 -135972726 + AluJo SINE Alu 13 311 -1 2676 262 65 54 chr2 114715128 114716186 -135971668 - HAL1 LINE L1 -1422 1085 11 2195 101 10 10 chr2 114716415 114716721 -135971133 + AluSx SINE Alu 1 306 -6 502 282 43 16 chr2 114717529 114717717 -135970137 - MIR SINE MIR -2 260 68 245 339 113 0 chr2 114717804 114717919 -135969935 + L2 LINE L2 2554 2681 -633 2095 103 0 39 chr2 114717975 114718286 -135969568 - AluSp SINE Alu -14 299 1 207 0 0 0 chr2 114718414 114718437 -135969417 + (CA)n Simple_repeat Simple_repeat 2 24 0 2089 158 0 0 chr2 114718479 114718790 -135969064 + AluSx SINE Alu 1 311 -1 981 209 0 0 chr2 114718839 114719016 -135968838 - AluJo SINE Alu -15 297 121 474 256 16 8 chr2 114719832 114719947 -135967907 + MIR SINE MIR 15 131 -126 387 0 0 0 chr2 114719947 114719990 -135967864 + (TG)n Simple_repeat Simple_repeat 2 44 0 2199 95 0 3 chr2 114720009 114720294 -135967560 - AluSx SINE Alu -28 284 1 2266 109 0 7 chr2 114721370 114721674 -135966180 - AluSg SINE Alu -5 305 4 282 269 51 13 chr2 114722335 114722413 -135965441 - MIR SINE MIR -57 151 71 1024 261 80 48 chr2 114722534 114723071 -135964783 - MLT1K LTR MaLR -2 586 15 282 252 189 27 chr2 114724057 114724168 -135963686 + MER5A DNA MER1_type 24 152 -37 685 193 34 0 chr2 114724168 114724287 -135963567 + FLAM_A SINE Alu 1 123 -19 233 265 0 0 chr2 114724289 114724338 -135963516 - MER5B DNA MER1_type -129 49 1 2291 82 7 7 chr2 114724402 114724695 -135963159 + AluSx SINE Alu 1 293 -19 1946 133 10 19 chr2 114725201 114725510 -135962344 - AluSx SINE Alu -6 306 1 209 274 132 19 chr2 114725537 114725643 -135962211 + L2 LINE L2 3196 3313 0 2249 122 0 3 chr2 114726040 114726351 -135961503 + AluSp SINE Alu 1 310 -3 2272 88 31 0 chr2 114726732 114727026 -135960828 - AluSc SINE Alu -6 303 1 868 185 19 6 chr2 114727026 114727188 -135960666 - FRAM SINE Alu -12 164 1 289 143 10 184 chr2 114727679 114727777 -135960077 + LTR33A LTR ERVL 1 81 -442 434 246 49 28 chr2 114727956 114728098 -135959756 + LTR33A LTR ERVL 338 482 -41 2355 69 0 10 chr2 114728629 114728953 -135958901 + AluY SINE Alu 1 321 0 2314 169 28 37 chr2 114729223 114729685 -135958169 - MLT1C LTR MaLR -8 459 2 1555 193 32 3 chr2 114730141 114730426 -135957428 + AluJb SINE Alu 3 295 -17 3569 210 17 3 chr2 114730777 114731420 -135956434 + MER82 DNA MER2_type 2 653 0 24 0 0 0 chr2 114731452 114731476 -135956378 + AT_rich Low_complexity Low_complexity 1 24 0 221 343 10 10 chr2 114731574 114731673 -135956181 + MIR3 SINE MIR 59 157 -51 276 77 0 0 chr2 114731677 114731716 -135956138 + (CA)n Simple_repeat Simple_repeat 2 40 0 189 0 0 0 chr2 114731899 114731920 -135955934 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1999 144 0 0 chr2 114731924 114732208 -135955646 - AluSx SINE Alu -28 284 1 182 170 0 21 chr2 114732226 114732273 -135955581 + GA-rich Low_complexity Low_complexity 3 48 0 257 362 107 5 chr2 114732460 114732536 -135955318 - MIR SINE MIR -13 249 182 444 152 13 0 chr2 114732536 114732615 -135955239 + MER116 DNA Mariner 1 80 0 257 362 107 5 chr2 114732615 114732734 -135955120 - MIR SINE MIR -80 182 34 365 73 0 0 chr2 114733046 114733101 -135954753 - AluSp SINE Alu -1 302 248 1195 95 0 6 chr2 114733101 114733259 -135954595 - AluSp SINE Alu -156 157 1 2469 97 0 0 chr2 114734657 114734967 -135952887 - AluSx SINE Alu -2 310 1 2242 94 0 7 chr2 114735281 114735580 -135952274 + AluSx SINE Alu 1 297 -15 806 161 0 0 chr2 114736165 114736289 -135951565 + FLAM_C SINE Alu 3 126 -17 1836 160 3 32 chr2 114736299 114736391 -135951463 + AluJo SINE Alu 1 94 -218 2312 199 50 21 chr2 114736391 114736869 -135950985 - LTR22B LTR ERVK 0 492 1 1836 160 3 32 chr2 114736869 114737089 -135950765 + AluJo SINE Alu 94 304 -8 194 0 39 0 chr2 114737511 114737537 -135950317 + (TA)n Simple_repeat Simple_repeat 1 27 0 2295 124 0 0 chr2 114737537 114737844 -135950010 - AluSx SINE Alu -5 307 1 286 244 58 64 chr2 114738876 114739032 -135948822 - MIR SINE MIR -8 254 100 189 0 0 0 chr2 114739032 114739053 -135948801 + (TTC)n Simple_repeat Simple_repeat 2 22 0 1595 136 101 12 chr2 114739055 114739312 -135948542 - AluSx SINE Alu -20 292 13 280 243 301 0 chr2 114740303 114740406 -135947448 + L2 LINE L2 3180 3313 0 459 117 0 103 chr2 114740435 114740513 -135947341 - AluS SINE Alu -248 70 2 2264 88 25 0 chr2 114740573 114740858 -135946996 - AluSg SINE Alu -18 292 1 1503 171 30 7 chr2 114741480 114741774 -135946080 - MLT1B LTR MaLR -2 388 88 625 126 39 204 chr2 114741774 114742004 -135945850 - MLT1A2 LTR MaLR 0 374 183 525 190 102 7 chr2 114742126 114742263 -135945591 - MLT1A2 LTR MaLR -215 150 1 370 143 13 39 chr2 114742293 114742370 -135945484 - MLT1B LTR MaLR -315 75 1 563 236 0 24 chr2 114742406 114742533 -135945321 + FLAM_A SINE Alu 2 125 -8 977 243 71 81 chr2 114743813 114744052 -135943802 - MLT1E3 LTR MaLR -3 621 355 1646 169 76 14 chr2 114744052 114744396 -135943458 + MLT1A1 LTR MaLR 1 365 0 977 243 71 81 chr2 114744396 114744551 -135943303 - MLT1E3 LTR MaLR -269 355 200 1935 158 3 10 chr2 114744578 114744888 -135942966 - AluJo SINE Alu -4 308 1 291 239 14 0 chr2 114744904 114744975 -135942879 - MLT1E3 LTR MaLR -418 236 165 721 144 104 12 chr2 114745457 114745630 -135942224 - MER5A DNA MER1_type 0 189 1 199 235 148 25 chr2 114745635 114745716 -135942138 + L3 LINE CR1 1311 1401 -176 1686 93 0 13 chr2 114745851 114746076 -135941778 - AluSg SINE Alu -88 222 1 570 249 28 61 chr2 114746076 114746289 -135941565 - LTR2 LTR ERV1 -243 206 1 1704 102 4 0 chr2 114746361 114746586 -135941268 - AluSg SINE Alu -84 226 1 225 0 0 0 chr2 114746591 114746616 -135941238 + (TA)n Simple_repeat Simple_repeat 1 25 0 1747 97 18 61 chr2 114746616 114746894 -135940960 - AluSq SINE Alu -10 303 38 3506 230 28 3 chr2 114747017 114747873 -135939981 - ERVL LTR ERVL -362 5402 4526 374 291 108 49 chr2 114748037 114748331 -135939523 - L1M2a LINE L1 -5863 1235 304 1691 182 7 13 chr2 114748432 114748740 -135939114 + AluJb SINE Alu 7 312 0 356 374 7 0 chr2 114748747 114748886 -135938968 - MIR SINE MIR -102 160 21 338 331 47 14 chr2 114749081 114749229 -135938625 + L2 LINE L2 2932 3084 -188 1121 173 32 40 chr2 114749601 114749879 -135937975 + MER65A LTR ERV1 170 445 0 897 146 42 0 chr2 114751262 114751427 -135936427 + MSTC LTR MaLR 257 428 0 1073 206 29 18 chr2 114751427 114751704 -135936150 + L1MB8 LINE L1 5899 6178 0 2093 73 0 35 chr2 114751922 114752236 -135935618 - AluY SINE Alu -8 303 1 515 193 129 42 chr2 114752400 114752664 -135935190 - HAL1 LINE L1 -1313 1194 908 6133 26 1 0 chr2 114753096 114754210 -135933644 + L1PA3 LINE L1 4889 6003 -152 1433 158 16 0 chr2 114754212 114754459 -135933395 + L1P LINE L1 4208 4458 -1688 706 269 17 39 chr2 114754815 114755049 -135932805 - MER92C LTR ERV1 -305 249 21 217 311 86 88 chr2 114755136 114755579 -135932275 + L2 LINE L2 2826 3267 -5 313 216 7 122 chr2 114755833 114755972 -135931882 - L1ME4a LINE L1 -2 6119 5997 270 183 39 19 chr2 114756410 114756514 -135931340 + (CACCAT)n Simple_repeat Simple_repeat 3 108 0 220 286 0 0 chr2 114756514 114756570 -135931284 + CT-rich Low_complexity Low_complexity 2 57 0 1989 154 7 3 chr2 114757372 114757678 -135930176 - AluSx SINE Alu -5 307 1 529 262 113 7 chr2 114758028 114758169 -135929685 + MIR SINE MIR 107 262 0 1817 169 6 0 chr2 114758302 114758616 -135929238 - MLT1A1 LTR MaLR -1 364 49 674 281 112 53 chr2 114758623 114759115 -135928739 - L1ME4a LINE L1 -59 6062 5542 2199 180 120 2 chr2 114759670 114760121 -135927733 + MLT1D LTR MaLR 1 504 -1 1953 101 0 40 chr2 114760435 114760713 -135927141 + AluSx SINE Alu 1 267 -45 264 303 92 53 chr2 114761505 114761657 -135926197 + MIR SINE MIR 62 219 -43 368 232 141 28 chr2 114761759 114761901 -135925953 - L1ME4a LINE L1 -2 6119 5962 328 274 67 73 chr2 114763992 114764171 -135923683 + MIR SINE MIR 85 262 0 807 313 32 26 chr2 114764454 114764831 -135923023 - MLT1I LTR MaLR -10 399 21 274 341 85 8 chr2 114765490 114765619 -135922235 - MIR SINE MIR -13 249 111 2120 111 0 0 chr2 114766111 114766382 -135921472 - AluSx SINE Alu -21 291 21 213 213 0 0 chr2 114766428 114766475 -135921379 + (CA)n Simple_repeat Simple_repeat 2 48 0 181 328 60 0 chr2 114766816 114766883 -135920971 - L3b LINE CR1 -19 1564 1494 974 222 32 5 chr2 114766933 114767149 -135920705 + MER58A DNA MER1_type 1 222 -2 378 199 26 64 chr2 114767164 114767320 -135920534 + Charlie7 DNA MER1_type 2461 2610 -2 314 98 20 0 chr2 114767496 114767547 -135920307 + (TA)n Simple_repeat Simple_repeat 2 53 0 259 200 14 29 chr2 114767548 114767618 -135920236 + GA-rich Low_complexity Low_complexity 5 73 0 195 184 0 0 chr2 114768890 114768928 -135918926 + (CCA)n Simple_repeat Simple_repeat 1 38 0 4181 190 33 15 chr2 114769047 114770001 -135917853 - L1MB7 LINE L1 -19 6165 5165 1560 118 0 0 chr2 114770001 114770213 -135917641 - AluSc SINE Alu -4 305 94 4181 190 33 15 chr2 114770213 114770923 -135916931 - L1MB7 LINE L1 -1019 5165 4470 * 5501 156 33 9 chr2 114770911 114771980 -135915874 - L1MC1 LINE L1 0 6613 5519 3496 158 30 66 chr2 114771983 114772773 -135915081 - L1MC1 LINE L1 -5664 762 1 1973 221 36 10 chr2 114772750 114773044 -135914810 - L1MB7 LINE L1 -1650 4776 4462 * 2337 113 0 0 chr2 114773044 114773353 -135914501 - AluY SINE Alu -2 309 1 1973 221 36 10 chr2 114773353 114773561 -135914293 - L1MB7 LINE L1 -1964 4462 4261 1337 264 84 5 chr2 114773566 114773949 -135913905 - MLT1D LTR MaLR 0 505 93 768 219 14 5 chr2 114773962 114774181 -135913673 - L1MB7 LINE L1 -3579 2567 2347 349 177 63 0 chr2 114774181 114774260 -135913594 - MLT1D LTR MaLR -417 88 5 1025 201 56 7 chr2 114774264 114774567 -135913287 - L1M4c LINE L1 -2166 4478 4161 41728 39 1 2 chr2 114774582 114780692 -135907162 - L1PA3 LINE L1 -3 6152 51 4165 252 56 21 chr2 114780690 114783576 -135904278 - L1M4c LINE L1 -2467 4177 1101 * 4650 163 39 28 chr2 114783612 114785490 -135902364 - L1MA7 LINE L1 0 6291 4389 3748 229 47 35 chr2 114785472 114786588 -135901266 - L1M4c LINE L1 -5413 1129 1 * 390 271 83 56 chr2 114786590 114786734 -135901120 - MIR SINE MIR -111 151 4 3286 269 17 28 chr2 114787030 114788108 -135899746 + L1PA15-16 LINE L1 9 1302 -5547 726 103 81 22 chr2 114788131 114788267 -135899587 + L1PB4 LINE L1 5715 5858 -298 * 978 85 30 12 chr2 114788265 114788429 -135899425 - L1P5 LINE L1 -429 5727 5561 1146 122 0 0 chr2 114788624 114788804 -135899050 + (TA)n Simple_repeat Simple_repeat 1 180 0 192 77 0 0 chr2 114788806 114788832 -135899022 + (CATATA)n Simple_repeat Simple_repeat 1 26 0 253 269 0 0 chr2 114789203 114789281 -135898573 - L1M LINE L1 -932 5368 5291 351 268 55 0 chr2 114789414 114789541 -135898313 + MER94 DNA DNA 1 134 0 1722 203 45 43 chr2 114790332 114790821 -135897033 - MLT1D LTR MaLR -8 497 8 1631 177 38 30 chr2 114791144 114791540 -135896314 - L1MA7 LINE L1 -155 6136 5738 2206 79 0 0 chr2 114792586 114792866 -135894988 + AluY SINE Alu 1 280 -31 251 245 19 57 chr2 114793029 114793188 -135894666 - AluYa5 SINE Alu -1 300 148 17505 34 6 3 chr2 114793293 114795555 -135892299 - L1P LINE L1 -898 5248 2982 2231 92 0 0 chr2 114795598 114795914 -135891940 + AluY SINE Alu 1 316 0 7451 33 3 0 chr2 114796127 114797663 -135890191 + L1PA4 LINE L1 4617 6155 0 2186 93 0 45 chr2 114797812 114798123 -135889731 - AluY SINE Alu -14 297 1 339 297 0 0 chr2 114799062 114799173 -135888681 + G-rich Low_complexity Low_complexity 1 111 0 293 274 0 0 chr2 114799429 114799491 -135888363 - L2 LINE L2 -1 3271 3210 352 257 75 102 chr2 114799606 114799871 -135887983 - HAL1 LINE L1 -1 2506 2249 21 0 0 0 chr2 114800470 114800491 -135887363 + AT_rich Low_complexity Low_complexity 1 21 0 246 283 17 25 chr2 114801067 114801187 -135886667 + L1ME4a LINE L1 4465 4583 -1563 190 132 38 38 chr2 114801218 114801271 -135886583 + T-rich Low_complexity Low_complexity 2 54 0 455 294 130 57 chr2 114801831 114802270 -135885584 + L1ME4a LINE L1 5255 5727 -394 308 217 70 49 chr2 114802437 114802580 -135885274 + L1ME4a LINE L1 5952 6097 -24 28 29 0 0 chr2 114802587 114802622 -135885232 + AT_rich Low_complexity Low_complexity 1 35 0 2095 248 55 39 chr2 114803384 114804210 -135883644 + L1MDa LINE L1 24 1170 -5370 446 275 58 0 chr2 114804214 114804385 -135883469 + L1M4 LINE L1 3288 3468 -2678 282 95 0 0 chr2 114804385 114804427 -135883427 + 5S rRNA rRNA 1 42 -79 2822 203 27 25 chr2 114804477 114805108 -135882746 + L1M1 LINE L1 13 644 -6921 25146 105 8 2 chr2 114805108 114808731 -135879123 - HERVL LTR ERVL -38 5616 1976 352 257 75 102 chr2 114809359 114809624 -135878230 + HAL1 LINE L1 2249 2506 -1 293 274 0 0 chr2 114809739 114809801 -135878053 + L2 LINE L2 3210 3271 -1 313 274 40 32 chr2 114810029 114810153 -135877701 - HAL1 LINE L1 -800 1707 1583 329 357 63 16 chr2 114811714 114811966 -135875888 + L2 LINE L2 1565 1828 -1486 1057 303 64 51 chr2 114812255 114813067 -135874787 - L1ME3A LINE L1 -220 5950 5150 1675 180 18 7 chr2 114813067 114813382 -135874472 - AluJb SINE Alu 0 318 1 1057 303 64 51 chr2 114813382 114814598 -135873256 - L1ME3A LINE L1 -1020 5150 3893 661 318 64 61 chr2 114814667 114815402 -135872452 - L1ME3A LINE L1 -2358 3788 3052 517 329 35 31 chr2 114815442 114815761 -135872093 - LTR16A LTR ERVL -106 344 25 1691 181 23 13 chr2 114816708 114817018 -135870836 - AluSq SINE Alu 0 313 1 1116 326 80 17 chr2 114817043 114818233 -135869621 - L1M4 LINE L1 -989 5157 3893 676 318 62 61 chr2 114818302 114819038 -135868816 - L1M4 LINE L1 -2358 3788 3052 502 333 19 30 chr2 114819078 114819342 -135868512 - LTR16A LTR ERVL -106 344 84 344 250 86 0 chr2 114819510 114819650 -135868204 - L1M4 LINE L1 -3332 2814 2663 222 62 0 0 chr2 114819846 114819878 -135867976 + (CA)n Simple_repeat Simple_repeat 2 33 0 421 270 227 14 chr2 114819883 114820093 -135867761 - MIR SINE MIR -14 248 10 206 266 188 57 chr2 114820271 114820463 -135867391 - L2 LINE L2 -34 3238 3022 197 83 28 0 chr2 114821263 114821299 -135866555 + (TTTTC)n Simple_repeat Simple_repeat 2 38 0 283 299 29 52 chr2 114821506 114821680 -135866174 + MLT1K LTR MaLR 156 325 -263 534 187 8 49 chr2 114821892 114822015 -135865839 + L2 LINE L2 3192 3309 -4 325 245 73 83 chr2 114822172 114822376 -135865478 - L1ME3A LINE L1 0 6170 5961 312 267 111 15 chr2 114822442 114822577 -135865277 - L1ME3A LINE L1 -219 5951 5804 415 259 147 17 chr2 114822614 114823115 -135864739 - L1ME3A LINE L1 -434 5736 5154 496 244 16 0 chr2 114823165 114823292 -135864562 - MLT1F1 LTR MaLR -397 170 42 205 346 19 19 chr2 114823567 114823674 -135864180 - L2 LINE L2 -778 2536 2430 195 315 0 0 chr2 114823774 114823828 -135864026 + MIR SINE MIR 202 255 -7 805 251 16 31 chr2 114825634 114825825 -135862029 - MER5A DNA MER1_type 0 189 2 584 240 11 17 chr2 114825835 114826010 -135861844 + MER5B DNA MER1_type 2 175 -3 224 190 300 40 chr2 114826024 114826124 -135861730 - MER5A DNA MER1_type -3 186 61 1039 198 14 56 chr2 114826141 114826429 -135861425 - L1ME1 LINE L1 -14 6152 5877 2036 150 40 72 chr2 114828201 114828647 -135859207 + MSTB1 LTR MaLR 1 432 0 2194 128 8 3 chr2 114828704 114829064 -135858790 - L1M2 LINE L1 -497 5794 5433 352 143 29 0 chr2 114829065 114829135 -135858719 + L1MA7 LINE L1 6215 6286 -5 412 321 49 11 chr2 114829200 114829384 -135858470 - MIR SINE MIR -52 210 20 23 0 0 0 chr2 114829620 114829643 -135858211 + AT_rich Low_complexity Low_complexity 1 23 0 597 286 58 27 chr2 114829647 114829906 -135857948 + L1ME3A LINE L1 5626 5892 -278 338 258 65 0 chr2 114830572 114830665 -135857189 + MER94 DNA DNA 15 113 -21 1461 213 95 39 chr2 114830869 114831311 -135856543 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr2 114832028 114832050 -135855804 + AT_rich Low_complexity Low_complexity 1 22 0 589 199 37 14 chr2 114832586 114832753 -135855101 + L1MD3 LINE L1 7737 7982 -13 279 310 26 26 chr2 114833341 114833454 -135854400 - MIR SINE MIR -63 145 33 1864 152 37 45 chr2 114834071 114834447 -135853407 + THE1C LTR MaLR 3 375 0 230 150 0 25 chr2 114835576 114835616 -135852238 + L2 LINE L2 3222 3260 -12 342 129 0 0 chr2 114836360 114836422 -135851432 + (TG)n Simple_repeat Simple_repeat 1 62 0 2096 106 0 3 chr2 114836463 114836849 -135851005 - AluSg SINE Alu 0 385 1 190 400 131 0 chr2 114837017 114837147 -135850707 + L2 LINE L2 3125 3271 -1 219 272 19 68 chr2 114837291 114837394 -135850460 + MER5A DNA MER1_type 92 189 0 949 67 0 15 chr2 114837666 114837800 -135850054 + L1PA5 LINE L1 6023 6154 0 2175 119 0 0 chr2 114837826 114838119 -135849735 + AluSc SINE Alu 1 293 -16 298 345 73 29 chr2 114838329 114838712 -135849142 - MLT1L LTR MaLR -2 613 214 211 322 0 0 chr2 114838974 114839033 -135848821 + (TG)n Simple_repeat Simple_repeat 1 59 0 1045 162 11 0 chr2 114839500 114839691 -135848163 + L1PA16 LINE L1 5937 6129 -37 2147 130 0 16 chr2 114839913 114840229 -135847625 - AluSx SINE Alu -1 311 1 495 309 21 27 chr2 114840973 114841161 -135846693 - MIR3 SINE MIR -3 205 19 226 211 63 74 chr2 114841371 114841466 -135846388 - MER20B DNA MER1_type -606 177 84 421 202 22 0 chr2 114842501 114842590 -135845264 - L1MC3 LINE L1 -645 7140 7050 30 77 0 0 chr2 114842600 114842665 -135845189 + AT_rich Low_complexity Low_complexity 1 65 0 7252 178 41 19 chr2 114842704 114844316 -135843538 - L1MC3 LINE L1 -759 7026 5380 343 273 23 0 chr2 114844638 114844726 -135843128 - L1MC4 LINE L1 -1339 6703 6614 2152 241 53 38 chr2 114844740 114845554 -135842300 - L1ME1 LINE L1 -76 6090 5236 2304 106 0 3 chr2 114845554 114845857 -135841997 - AluSp SINE Alu -11 302 1 2152 241 53 38 chr2 114845857 114846410 -135841444 - L1ME1 LINE L1 -930 5236 4693 715 324 81 42 chr2 114846519 114847096 -135840758 + L2 LINE L2 2698 3299 -14 2211 165 31 33 chr2 114847141 114847497 -135840357 + MER68 LTR ERV1 7 363 -199 2967 163 8 4 chr2 114847497 114847981 -135839873 - MER66B LTR ERV1 0 486 1 2211 165 31 33 chr2 114847981 114848079 -135839775 + MER68 LTR ERV1 363 460 -102 514 268 47 0 chr2 114848105 114848232 -135839622 + MIR SINE MIR 65 197 -65 2300 70 3 10 chr2 114849244 114849546 -135838308 + AluY SINE Alu 1 300 -11 207 305 0 119 chr2 114850280 114850398 -135837456 + L3b LINE CR1 1465 1568 -15 235 226 186 20 chr2 114850522 114850624 -135837230 - L2 LINE L2 -5 3308 3190 299 262 57 33 chr2 114850870 114850992 -135836862 - MIR SINE MIR -110 152 28 251 170 21 0 chr2 114851098 114851145 -135836709 + MLT1I LTR MaLR 362 409 0 1755 207 48 18 chr2 114852054 114852339 -135835515 - L1ME1 LINE L1 -46 6120 5816 198 0 0 0 chr2 114852339 114852361 -135835493 + (TA)n Simple_repeat Simple_repeat 2 23 0 1755 207 48 18 chr2 114852361 114852514 -135835340 - L1ME1 LINE L1 -350 5816 5669 338 270 129 11 chr2 114852595 114852812 -135835042 - MLT1J1 LTR MaLR -133 317 62 232 284 148 0 chr2 114852879 114852960 -135834894 - L2 LINE L2 0 3313 3221 21 36 0 0 chr2 114853540 114853568 -135834286 + AT_rich Low_complexity Low_complexity 1 28 0 2212 101 0 0 chr2 114854047 114854350 -135833504 - AluSg1 SINE Alu 0 303 1 24 53 0 0 chr2 114854668 114854706 -135833148 + AT_rich Low_complexity Low_complexity 1 38 0 252 169 60 36 chr2 114854706 114854789 -135833065 - L1PB4 LINE L1 0 6156 6072 2326 101 146 214 chr2 114854793 114855665 -135832189 + pTR5 LTR ERV1 31 581 -133 808 211 6 6 chr2 114855666 114855832 -135832022 - L1PB4 LINE L1 -52 6104 5939 5671 152 20 2 chr2 114856254 114857480 -135830374 + L1MA4 LINE L1 5049 6294 -6 2188 118 6 59 chr2 114858121 114858476 -135829378 - MER1B DNA MER1_type 0 337 2 693 213 69 0 chr2 114858668 114858828 -135829026 - MER45A DNA AcHobo -7 171 1 205 307 114 11 chr2 114858838 114858926 -135828928 - L2 LINE L2 -36 3236 3140 576 293 21 32 chr2 114858932 114859212 -135828642 - MARNA DNA Mariner -160 426 150 182 250 12 62 chr2 114861122 114861202 -135826652 - L2 LINE L2 -2 3270 3195 2043 180 33 19 chr2 114861291 114861719 -135826135 - Tigger2a DNA MER2_type 0 434 1 817 203 58 21 chr2 114863941 114864476 -135823378 - MLT1E1 LTR MaLR 0 654 3 273 364 131 5 chr2 114864486 114864684 -135823170 + MIR SINE MIR 20 242 -20 236 102 20 20 chr2 114865098 114865147 -135822707 - L1ME4a LINE L1 -109 6012 5964 602 237 13 40 chr2 114865323 114865475 -135822379 + L2 LINE L2 3165 3312 -1 1914 212 52 23 chr2 114866114 114866590 -135821264 + MLT1E2 LTR MaLR 137 626 0 396 272 105 9 chr2 114866912 114867026 -135820828 + L1ME LINE L1 45 169 -5901 415 309 109 66 chr2 114867449 114867799 -135820055 + L1ME LINE L1 281 645 -5425 919 199 34 51 chr2 114867804 114868040 -135819814 - MLT1F1 LTR MaLR -12 555 324 211 225 0 0 chr2 114868273 114868313 -135819541 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 33 35 0 17 chr2 114868360 114868385 -135819469 + AT_rich Low_complexity Low_complexity 1 25 -32 2280 89 0 7 chr2 114868385 114868677 -135819177 + AluSx SINE Alu 1 290 -22 33 35 0 17 chr2 114868677 114868709 -135819145 + AT_rich Low_complexity Low_complexity 25 57 0 250 280 115 66 chr2 114868883 114869065 -135818789 + MIR SINE MIR 65 255 -7 278 280 34 91 chr2 114870529 114870793 -135817061 + HAL1b LINE L1 359 607 -741 26 0 0 0 chr2 114870794 114870820 -135817034 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 114871154 114871176 -135816678 + AT_rich Low_complexity Low_complexity 1 22 0 575 290 51 45 chr2 114871385 114871988 -135815866 + L1M4 LINE L1 3624 4223 -1923 297 330 134 5 chr2 114872206 114872400 -135815454 + MIR SINE MIR 14 232 -30 202 321 14 64 chr2 114873194 114873334 -135814520 - L2 LINE L2 -3 3269 3137 21 0 0 0 chr2 114873830 114873851 -135814003 + AT_rich Low_complexity Low_complexity 1 21 0 2569 114 8 0 chr2 114873862 114874221 -135813633 + THE1B LTR MaLR 3 364 0 483 258 8 0 chr2 114874869 114875001 -135812853 - MER94 DNA DNA -1 133 1 2477 108 3 0 chr2 114875547 114875909 -135811945 - L1PB1 LINE L1 -2 6149 5787 283 113 32 0 chr2 114875917 114875979 -135811875 + (TA)n Simple_repeat Simple_repeat 2 65 0 5682 110 11 32 chr2 114875992 114876351 -135811503 - L1PA11 LINE L1 0 6174 5809 221 0 0 33 chr2 114876351 114876381 -135811473 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5682 110 11 32 chr2 114876381 114877430 -135810424 - L1PA11 LINE L1 -365 5809 4793 737 106 65 0 chr2 114877430 114877553 -135810301 - L1PB1 LINE L1 -369 5782 5652 210 143 0 0 chr2 114877560 114877595 -135810259 + (TCTCC)n Simple_repeat Simple_repeat 4 38 0 2041 112 10 10 chr2 114877595 114877890 -135809964 - AluSp SINE Alu -18 295 1 4819 176 23 185 chr2 114877891 114878525 -135809329 - L1P5 LINE L1 -464 6403 5668 263 135 0 0 chr2 114878525 114878562 -135809292 + tRNA-Tyr-TAC tRNA tRNA 1 37 -39 4819 176 23 185 chr2 114878562 114879052 -135808802 - L1P5 LINE L1 -1199 5668 5100 383 143 41 41 chr2 114879052 114879150 -135808704 + MER4A LTR ERV1 1 98 -566 4819 176 23 185 chr2 114879150 114879203 -135808651 - L1P5 LINE L1 -1767 5100 5040 1720 139 0 33 chr2 114879203 114879506 -135808348 + MER4A LTR ERV1 372 664 0 4819 176 23 185 chr2 114879506 114880601 -135807253 - L1P5 LINE L1 -1827 5040 4163 * 12011 130 9 7 chr2 114880588 114880639 -135807215 - L1P5 LINE L1 -4886 1977 1928 2478 48 0 22 chr2 114880639 114880950 -135806904 - AluY SINE Alu -7 304 1 12011 130 9 7 chr2 114880950 114882869 -135804985 - L1P5 LINE L1 -4935 1928 3 345 121 20 152 chr2 114883244 114883343 -135804511 + MER63 DNA MER1_type 2 713 -123 989 250 30 5 chr2 114883351 114883740 -135804114 - L1M4 LINE L1 -1029 5117 4638 263 191 0 0 chr2 114885428 114885475 -135802379 - MIR SINE MIR -15 247 201 566 230 63 86 chr2 114885479 114885701 -135802153 + L2 LINE L2 3097 3313 0 361 343 60 0 chr2 114885724 114885858 -135801996 - MIR SINE MIR -108 154 13 514 304 60 16 chr2 114885877 114886061 -135801793 - MIR SINE MIR -70 192 1 30 77 0 0 chr2 114888175 114888240 -135799614 + AT_rich Low_complexity Low_complexity 1 65 0 456 341 154 26 chr2 114888326 114888716 -135799138 + L2 LINE L2 2493 2932 -382 304 299 104 21 chr2 114888807 114888951 -135798903 + L2 LINE L2 3119 3274 -39 29 0 0 0 chr2 114890225 114890254 -135797600 + AT_rich Low_complexity Low_complexity 1 29 0 2849 130 14 0 chr2 114890288 114890710 -135797144 - MSTA LTR MaLR 0 428 1 255 221 25 63 chr2 114891108 114891266 -135796588 + L1ME LINE L1 5250 5401 -745 2354 85 17 0 chr2 114891368 114891662 -135796192 + AluY SINE Alu 1 299 -12 200 302 35 12 chr2 114893315 114893401 -135794453 + MIR SINE MIR 77 164 -98 223 306 28 0 chr2 114893476 114893548 -135794306 + MIR3 SINE MIR 124 197 -11 1809 167 11 42 chr2 114894287 114894664 -135793190 + MLT1A1 LTR MaLR 1 365 0 226 170 38 19 chr2 114894692 114894745 -135793109 + CT-rich Low_complexity Low_complexity 3 56 0 309 297 20 10 chr2 114895075 114895176 -135792678 - L1MC/D LINE L1 -2028 5780 5679 24 100 0 0 chr2 114895729 114895809 -135792045 + AT_rich Low_complexity Low_complexity 1 80 0 1790 130 85 23 chr2 114897627 114897980 -135789874 + THE1C LTR MaLR 1 375 0 213 108 0 0 chr2 114898026 114898063 -135789791 + (TG)n Simple_repeat Simple_repeat 2 38 0 787 278 88 56 chr2 114898064 114898531 -135789323 + MLT1G1 LTR MaLR 96 577 -18 555 298 43 39 chr2 114898541 114898796 -135789058 + MIR SINE MIR 7 262 0 189 286 204 0 chr2 114899259 114899357 -135788497 - L2 LINE L2 -5 3308 3191 327 309 161 43 chr2 114899696 114899858 -135787996 - MER5A DNA MER1_type 0 189 9 2071 144 72 65 chr2 114899983 114900412 -135787442 + MSTB1 LTR MaLR 1 432 0 22 35 0 0 chr2 114900732 114900761 -135787093 + AT_rich Low_complexity Low_complexity 1 29 0 315 269 96 13 chr2 114901212 114901368 -135786486 + L1MC5 LINE L1 7060 7228 -733 624 233 76 36 chr2 114901550 114901799 -135786055 + L1MC5 LINE L1 7318 7576 -385 253 286 101 28 chr2 114901890 114902068 -135785786 + L1ME LINE L1 5386 5576 -588 9385 205 50 29 chr2 114902266 114903160 -135784694 - L1MC2 LINE L1 0 7757 6883 252 0 0 0 chr2 114903160 114903188 -135784666 + (TG)n Simple_repeat Simple_repeat 1 28 0 9385 205 50 29 chr2 114903188 114904846 -135783008 - L1MC2 LINE L1 -874 6883 5186 258 216 112 52 chr2 114905373 114905489 -135782365 - HAL1b LINE L1 -561 787 665 22 35 0 0 chr2 114906970 114906999 -135780855 + AT_rich Low_complexity Low_complexity 1 29 0 347 294 109 33 chr2 114908614 114908798 -135779056 - HAL1b LINE L1 -1096 252 55 208 143 29 0 chr2 114909400 114909435 -135778419 + CT-rich Low_complexity Low_complexity 2 37 0 578 193 64 0 chr2 114909917 114910026 -135777828 + FLAM_A SINE Alu 1 116 -17 198 143 0 0 chr2 114910125 114910160 -135777694 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 361 266 53 39 chr2 114910354 114910561 -135777293 + HAL1 LINE L1 2294 2503 -4 23 33 0 0 chr2 114910566 114910596 -135777258 + AT_rich Low_complexity Low_complexity 1 30 0 392 303 29 57 chr2 114911877 114912088 -135775766 - MIR3 SINE MIR -54 208 4 513 280 47 0 chr2 114913277 114913427 -135774427 - MIR SINE MIR -17 245 89 736 331 85 43 chr2 114914674 114915378 -135772476 + L2 LINE L2 2530 3271 -1 2258 201 65 2 chr2 114916095 114916603 -135771251 - L1MB1 LINE L1 -1 6167 5628 2322 112 0 3 chr2 114916919 114917224 -135770630 + AluSx SINE Alu 1 304 -8 216 0 0 0 chr2 114917849 114917873 -135769981 + (T)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr2 114919158 114919180 -135768674 + AT_rich Low_complexity Low_complexity 1 22 0 188 402 19 0 chr2 114919568 114919675 -135768179 + L2 LINE L2 3205 3313 0 311 274 34 14 chr2 114919866 114920012 -135767842 - MER103 DNA DNA -1 165 17 594 295 81 0 chr2 114920033 114920243 -135767611 - L2 LINE L2 -5 3308 3082 907 200 7 0 chr2 114920259 114920409 -135767445 - FRAM SINE Alu -25 151 1 656 275 90 8 chr2 114920409 114920653 -135767201 - L2 LINE L2 -233 3080 2817 295 275 100 8 chr2 114920830 114920950 -135766904 + MIR SINE MIR 124 254 -8 1828 120 3 65 chr2 114921052 114921360 -135766494 + AluSg SINE Alu 1 289 -21 417 292 24 12 chr2 114921999 114922167 -135765687 - L1MC/D LINE L1 -2052 5756 5587 1206 282 153 21 chr2 114922651 114923093 -135764761 - HAL1 LINE L1 -627 1880 1498 1980 147 13 3 chr2 114923093 114923392 -135764462 - AluSx SINE Alu -10 302 1 1206 282 153 21 chr2 114923392 114923719 -135764135 - HAL1 LINE L1 -1009 1498 1009 657 318 97 27 chr2 114923739 114924133 -135763721 - HAL1 LINE L1 -2028 479 49 1261 220 65 49 chr2 114924133 114924501 -135763353 + MLT1A2 LTR MaLR 1 374 0 657 318 97 27 chr2 114924501 114924550 -135763304 - HAL1 LINE L1 -2458 49 5 2572 45 0 7 chr2 114924702 114925010 -135762844 - AluY SINE Alu -5 306 1 621 200 48 35 chr2 114926062 114926207 -135761647 - MER58B DNA MER1_type 0 341 195 21 57 0 0 chr2 114927740 114927775 -135760079 + AT_rich Low_complexity Low_complexity 1 35 0 367 155 14 0 chr2 114927893 114927964 -135759890 - MER116 DNA Mariner -8 72 1 237 333 94 25 chr2 114928246 114928405 -135759449 - MIR SINE MIR -92 170 1 230 342 33 33 chr2 114928587 114928707 -135759147 - MER5A DNA MER1_type -26 163 44 25 65 0 0 chr2 114928763 114928809 -135759045 + AT_rich Low_complexity Low_complexity 1 46 0 499 121 143 11 chr2 114928815 114928906 -135758948 - U13 snRNA snRNA -1 103 1 242 303 101 37 chr2 114928912 114929021 -135758833 - MIR SINE MIR -62 146 31 1807 172 3 7 chr2 114930368 114930671 -135757183 - AluSq SINE Alu -11 302 1 1487 129 5 0 chr2 114932277 114932479 -135755375 - AluSp SINE Alu -110 203 1 256 307 25 55 chr2 114933179 114933342 -135754512 - L3 LINE CR1 -103 1474 1317 288 314 21 50 chr2 114933536 114933676 -135754178 - L3 LINE CR1 -270 1307 1172 2472 159 17 0 chr2 114934082 114934502 -135753352 - MSTA LTR MaLR -1 427 1 513 68 0 0 chr2 114934509 114934583 -135753271 + L1P LINE L1 3179 3252 -2894 2004 125 0 0 chr2 114934746 114935027 -135752827 + AluY SINE Alu 1 281 -30 819 201 11 17 chr2 114935247 114935426 -135752428 + MER5B DNA MER1_type 1 178 0 308 288 120 8 chr2 114935426 114935551 -135752303 - L3 LINE CR1 -793 784 646 665 237 63 93 chr2 114936556 114936589 -135751265 - MER20B DNA MER1_type -7 776 744 1487 103 29 46 chr2 114936589 114936870 -135750984 - L1MA5A LINE L1 0 6297 6022 665 237 63 93 chr2 114936870 114937309 -135750545 - MER20B DNA MER1_type -39 744 318 1282 267 120 22 chr2 114937380 114938006 -135749848 + L1ME3A LINE L1 5453 6139 -31 29 0 0 0 chr2 114938278 114938307 -135749547 + AT_rich Low_complexity Low_complexity 1 29 0 263 176 118 0 chr2 114938490 114938558 -135749296 + MER113 DNA MER1_type? 351 426 -95 2220 159 64 17 chr2 114939190 114939599 -135748255 + MSTA LTR MaLR 1 428 0 260 267 0 0 chr2 114939632 114939707 -135748147 - MER116 DNA Mariner 0 80 6 214 258 97 0 chr2 114939810 114939872 -135747982 + MIR SINE MIR 64 131 -77 25 65 0 0 chr2 114940076 114940122 -135747732 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr2 114940803 114940826 -135747028 + AT_rich Low_complexity Low_complexity 1 23 0 616 51 0 0 chr2 114941905 114941983 -135745871 - L1P3 LINE L1 -401 5771 5694 1617 77 0 0 chr2 114941983 114942191 -135745663 + L1PA8 LINE L1 5965 6172 0 249 383 0 21 chr2 114943276 114943370 -135744484 + MIR SINE MIR 22 113 -95 253 241 13 13 chr2 114944597 114944676 -135743178 + MIR3 SINE MIR 99 177 -31 703 304 73 53 chr2 114944914 114945463 -135742391 - L1MEc LINE L1 -4581 1729 1170 304 193 0 79 chr2 114945491 114945605 -135742249 - L1MEc LINE L1 -5010 1109 1005 249 57 0 0 chr2 114946029 114946064 -135741790 + (TG)n Simple_repeat Simple_repeat 2 36 0 211 374 78 17 chr2 114946689 114946868 -135740986 - L2 LINE L2 -468 2846 2657 2488 197 38 16 chr2 114947427 114947940 -135739914 - L1MD1 LINE L1 -124 6118 5591 180 0 0 0 chr2 114947940 114947960 -135739894 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2488 197 38 16 chr2 114947960 114947995 -135739859 - L1MD1 LINE L1 -651 5591 5558 5089 70 4 42 chr2 114948008 114948741 -135739113 - L1PA7 LINE L1 -1 6153 5449 14378 119 5 10 chr2 114948741 114951171 -135736683 - L1P LINE L1 -2604 3542 1126 14062 34 5 3 chr2 114951434 114953915 -135733939 - L1PA4 LINE L1 0 6155 3673 8795 41 4 14 chr2 114953918 114955118 -135732736 + L1PA4 LINE L1 2500 3687 -2459 2384 113 0 0 chr2 114955219 114955529 -135732325 - AluSg SINE Alu 0 310 1 509 333 33 25 chr2 114956004 114956247 -135731607 - L3 LINE CR1 -1050 527 283 227 238 0 83 chr2 114956520 114956604 -135731250 - L2 LINE L2 -11 3261 3185 473 188 39 0 chr2 114956822 114956950 -135730904 - L1MA4 LINE L1 -6 6294 6162 22 70 0 0 chr2 114957410 114957453 -135730401 + AT_rich Low_complexity Low_complexity 1 43 0 217 196 20 20 chr2 114957723 114957774 -135730080 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 797 257 127 67 chr2 114959069 114959384 -135728470 + L2 LINE L2 1997 2330 -984 1786 195 16 21 chr2 114959384 114959764 -135728090 + MER68 LTR ERV1 1 378 -184 2080 115 3 7 chr2 114959781 114960076 -135727778 - AluY SINE Alu -17 294 1 325 275 32 93 chr2 114960930 114961122 -135726732 - MER102a DNA MER1_type -1095 322 147 2740 148 31 22 chr2 114961122 114961671 -135726183 + L1MA7 LINE L1 5738 6291 0 325 275 32 93 chr2 114961671 114961725 -135726129 - MER102a DNA MER1_type -1270 147 91 317 234 109 106 chr2 114962450 114962514 -135725340 + MER112 DNA MER1_type 3 65 -195 216 0 0 0 chr2 114962514 114962538 -135725316 + (CA)n Simple_repeat Simple_repeat 2 25 0 317 234 109 106 chr2 114962538 114962729 -135725125 + MER112 DNA MER1_type 65 259 -1 372 234 0 0 chr2 114962860 114962954 -135724900 + GA-rich Low_complexity Low_complexity 1 94 0 709 259 135 71 chr2 114963880 114964177 -135723677 + L2 LINE L2 1997 2312 -1002 1226 273 13 13 chr2 114964195 114964573 -135723281 + MER68 LTR ERV1 1 378 -184 684 258 0 0 chr2 114964754 114964909 -135722945 + MER68 LTR ERV1 408 562 0 185 195 24 0 chr2 114964911 114964952 -135722902 + L2 LINE L2 2328 2369 -945 313 253 84 12 chr2 114965026 114965109 -135722745 + L2 LINE L2 2379 2467 -847 1791 198 55 23 chr2 114965112 114965496 -135722358 - MSTD LTR MaLR 0 396 1 6520 229 65 28 chr2 114965497 114965749 -135722105 - MSTD-int LTR MaLR -1 1734 1493 1835 150 0 46 chr2 114965749 114966055 -135721799 + AluJb SINE Alu 1 292 -20 6520 229 65 28 chr2 114966055 114967474 -135720380 - MSTD-int LTR MaLR -242 1493 2 864 202 29 4 chr2 114967476 114967823 -135720031 - MSTD LTR MaLR 0 396 1 690 272 168 55 chr2 114967826 114968392 -135719462 + L2 LINE L2 2472 3163 -150 1689 156 63 40 chr2 114968392 114968770 -135719084 + MLT1B LTR MaLR 4 390 0 690 272 168 55 chr2 114968770 114968940 -135718914 + L2 LINE L2 3163 3312 -1 1215 267 88 73 chr2 114968989 114969091 -135718763 + MLT1H LTR MaLR 1 100 -449 2275 117 0 7 chr2 114969091 114969400 -135718454 - AluSq SINE Alu -6 307 1 1215 267 88 73 chr2 114969400 114969833 -135718021 + MLT1H LTR MaLR 100 544 -5 531 270 89 21 chr2 114969891 114970095 -135717759 + MIR SINE MIR 2 218 -44 24 32 0 0 chr2 114970765 114970796 -135717058 + AT_rich Low_complexity Low_complexity 1 31 0 300 313 31 21 chr2 114971772 114971868 -135715986 - MIR3 SINE MIR -97 111 15 491 90 13 0 chr2 114972652 114972730 -135715124 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 1894 133 3 72 chr2 114972733 114973065 -135714789 - AluSx SINE Alu -3 309 1 226 276 48 38 chr2 114973097 114973202 -135714652 - MLT1J LTR MaLR -321 190 85 18928 112 9 49 chr2 114974176 114977616 -135710238 + L1P LINE L1 386 3687 -2459 2384 113 0 0 chr2 114977717 114978027 -135709827 - AluSg SINE Alu 0 310 1 509 333 33 25 chr2 114978502 114978745 -135709109 - L3 LINE CR1 -1050 527 283 227 238 0 83 chr2 114979018 114979102 -135708752 - L2 LINE L2 -11 3261 3185 473 188 39 0 chr2 114979320 114979448 -135708406 - L1MA4 LINE L1 -6 6294 6162 22 70 0 0 chr2 114979908 114979951 -135707903 + AT_rich Low_complexity Low_complexity 1 43 0 217 196 20 20 chr2 114980221 114980272 -135707582 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 215 317 204 32 chr2 114981378 114981599 -135706255 - L3 LINE CR1 -16 1561 1303 692 265 16 0 chr2 114981638 114981823 -135706031 + MER5A DNA MER1_type 2 189 0 239 337 20 87 chr2 114982253 114982449 -135705405 - MIR3 SINE MIR -6 202 20 2225 112 0 10 chr2 114982619 114982922 -135704932 + AluSq SINE Alu 1 300 -13 240 250 0 16 chr2 114982962 114983026 -135704828 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 2419 67 0 0 chr2 114983063 114983360 -135704494 - AluY SINE Alu -14 297 1 621 200 48 35 chr2 114984412 114984557 -135703297 - MER58B DNA MER1_type 0 341 195 21 57 0 0 chr2 114986091 114986126 -135701728 + AT_rich Low_complexity Low_complexity 1 35 0 367 155 14 0 chr2 114986244 114986315 -135701539 - MER116 DNA Mariner -8 72 1 237 333 94 25 chr2 114986597 114986756 -135701098 - MIR SINE MIR -92 170 1 230 342 33 33 chr2 114986938 114987058 -135700796 - MER5A DNA MER1_type -26 163 44 25 65 0 0 chr2 114987114 114987160 -135700694 + AT_rich Low_complexity Low_complexity 1 46 0 499 121 143 11 chr2 114987166 114987257 -135700597 - U13 snRNA snRNA -1 103 1 242 303 101 37 chr2 114987263 114987372 -135700482 - MIR SINE MIR -62 146 31 38 75 0 0 chr2 114988672 114988752 -135699102 + AT_rich Low_complexity Low_complexity 1 80 0 4399 168 25 25 chr2 114990678 114991570 -135696284 - MER4D LTR ERV1 -11 892 1 7026 65 2 0 chr2 114992386 114993466 -135694388 + L1PA8 LINE L1 5090 6171 -1 381 261 65 0 chr2 114994383 114994475 -135693379 - MIR SINE MIR -79 183 86 294 297 36 27 chr2 114995262 114995373 -135692481 - MIR3 SINE MIR -11 197 86 323 326 26 11 chr2 114996446 114996636 -135691218 - MLT1I LTR MaLR -83 326 134 8090 26 0 0 chr2 114997310 114998305 -135689549 - L1PA4 LINE L1 -1216 4930 3936 6833 42 3 0 chr2 114998306 114999536 -135688318 + L1PA4 LINE L1 4942 6173 0 240 35 0 0 chr2 115000219 115000248 -135687606 + (CA)n Simple_repeat Simple_repeat 2 30 0 1037 155 26 5 chr2 115000251 115000444 -135687410 + MSTB1 LTR MaLR 236 432 0 496 214 0 0 chr2 115000599 115000688 -135687166 + MER5A DNA MER1_type 17 105 -84 1664 184 7 3 chr2 115001604 115001908 -135685946 + AluJb SINE Alu 1 305 -7 495 264 85 0 chr2 115002434 115002610 -135685244 - MIR SINE MIR -34 228 37 214 330 112 34 chr2 115003821 115004142 -135683712 + L2 LINE L2 2827 3172 -100 244 321 214 6 chr2 115004601 115004769 -135683085 + L2 LINE L2 1632 1834 -1480 347 183 0 24 chr2 115004966 115005048 -135682806 + GA-rich Low_complexity Low_complexity 4 83 0 1862 186 13 5 chr2 115006323 115006700 -135681154 - MLT1B LTR MaLR -10 380 1 211 379 48 29 chr2 115009860 115010066 -135677788 - L2 LINE L2 -576 2738 2529 744 316 27 9 chr2 115010596 115010821 -135677033 + MIR SINE MIR 25 253 -9 1936 137 3 26 chr2 115011483 115011796 -135676058 - AluY SINE Alu -5 306 1 325 132 0 0 chr2 115011803 115011856 -135675998 + MLT1E1 LTR MaLR 599 651 -3 16583 64 0 11 chr2 115012104 115014365 -135673489 + L1P LINE L1 3 2240 -3906 20847 104 10 2 chr2 115014547 115017550 -135670304 - HERVL-A2 LTR ERVL -1112 4542 1517 7209 109 45 11 chr2 115017543 115018694 -135669160 - HERVL-A2 LTR ERVL -4464 1190 1 * 1655 200 37 50 chr2 115018694 115019250 -135668604 - MLT2A2 LTR ERVL 0 554 1 11870 158 24 12 chr2 115019250 115021676 -135666178 + L1M1 LINE L1 1967 4363 -3202 198 0 0 0 chr2 115021676 115021698 -135666156 + (GAAAA)n Simple_repeat Simple_repeat 5 26 0 2386 66 30 7 chr2 115021698 115022001 -135665853 + AluY SINE Alu 2 311 0 11870 158 24 12 chr2 115022001 115023288 -135664566 + L1M1 LINE L1 4363 5741 -1824 1977 157 0 0 chr2 115023288 115023569 -135664285 + AluSx SINE Alu 16 296 -16 11870 158 24 12 chr2 115023569 115023973 -135663881 + L1M1 LINE L1 5741 6139 -1426 3943 232 33 34 chr2 115024006 115025736 -135662118 + L1MC/D LINE L1 3835 5563 -679 2234 148 10 8 chr2 115025738 115026123 -135661731 + L1P3 LINE L1 15 400 -6061 4916 167 42 14 chr2 115026266 115028015 -135659839 + L1MA7 LINE L1 4487 6291 0 2306 258 53 27 chr2 115028051 115029873 -135657981 + L1MC/D LINE L1 1414 3378 -3579 1297 263 92 5 chr2 115029886 115030266 -135657588 + MLT1D LTR MaLR 93 505 0 1973 221 36 10 chr2 115030271 115030479 -135657375 + L1MC/D LINE L1 4792 4993 -1964 2314 117 0 0 chr2 115030479 115030788 -135657066 + AluY SINE Alu 1 309 -2 1973 221 36 10 chr2 115030788 115031082 -135656772 + L1MC/D LINE L1 4993 5307 -1650 * 3519 163 30 62 chr2 115031059 115031846 -135656008 + L1MCa LINE L1 1 762 -5664 3007 116 45 13 chr2 115031849 115032401 -135655453 + L1MC/D LINE L1 5519 6088 -525 276 335 134 5 chr2 115032733 115032927 -135654927 - MIR SINE MIR -30 232 14 575 290 50 44 chr2 115033145 115033748 -135654106 - L1 LINE L1 -1923 4223 3624 22 0 0 0 chr2 115033957 115033979 -135653875 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 115034313 115034339 -135653515 + AT_rich Low_complexity Low_complexity 1 26 0 296 269 38 95 chr2 115034340 115034604 -135653250 - HAL1b LINE L1 -741 607 359 24 0 0 0 chr2 115035785 115035809 -135652045 + AT_rich Low_complexity Low_complexity 1 24 0 250 280 115 66 chr2 115036074 115036256 -135651598 - MIR SINE MIR -7 255 65 24 0 0 0 chr2 115036430 115036454 -135651400 + AT_rich Low_complexity Low_complexity 1 24 0 2183 110 0 7 chr2 115036462 115036754 -135651100 - AluSx SINE Alu -22 290 1 1487 129 5 0 chr2 115038360 115038562 -135649292 - AluSp SINE Alu -110 203 1 245 313 25 55 chr2 115039262 115039425 -135648429 - L3 LINE CR1 -103 1474 1317 303 307 21 50 chr2 115039619 115039759 -135648095 - L3 LINE CR1 -270 1307 1172 2723 138 14 0 chr2 115040165 115040586 -135647268 - MSTA LTR MaLR -1 427 1 17202 39 2 1 chr2 115040593 115043027 -135644827 + L1P2 LINE L1 3179 5616 -539 7177 30 19 7 chr2 115043142 115044760 -135643094 + L1PA4 LINE L1 4527 6155 0 903 90 0 23 chr2 115044909 115045042 -135642812 - Alu SINE Alu -12 298 169 1858 101 8 0 chr2 115045565 115045802 -135642052 - AluSq SINE Alu -74 239 1 226 276 48 38 chr2 115045834 115045939 -135641915 - MLT1J LTR MaLR -321 190 85 187 188 0 0 chr2 115047912 115047944 -135639910 + MIR SINE MIR 222 253 -9 529 262 113 7 chr2 115048485 115048626 -135639228 + MIR SINE MIR 107 262 0 1817 169 6 0 chr2 115048759 115049073 -135638781 - MLT1A1 LTR MaLR -1 364 49 651 283 112 53 chr2 115049080 115049572 -135638282 - L1ME4a LINE L1 -59 6062 5542 2215 177 120 2 chr2 115050127 115050578 -135637276 + MLT1D LTR MaLR 1 504 -1 2318 117 7 0 chr2 115050892 115051201 -135636653 + AluSq SINE Alu 1 311 -2 315 104 0 0 chr2 115051202 115051250 -135636604 + MER72 LTR ERV1 675 722 0 2398 184 8 6 chr2 115051330 115051836 -135636018 + L1MA9 LINE L1 5770 6276 -36 2038 137 64 19 chr2 115053015 115053374 -135634480 - THE1C LTR MaLR 0 375 1 312 280 37 28 chr2 115054154 115054261 -135633593 + L1MC4 LINE L1 7914 8021 -21 803 142 8 0 chr2 115054418 115054583 -135633271 - AluSg/x SINE Alu 0 329 164 5010 96 1 7 chr2 115054726 115055541 -135632313 + L1P LINE L1 2733 3543 -2598 5489 45 8 10 chr2 115055541 115056248 -135631606 + L1PA4 LINE L1 5449 6155 0 985 75 0 22 chr2 115056397 115056531 -135631323 - Alu SINE Alu -11 299 169 1870 97 8 0 chr2 115057049 115057286 -135630568 - AluSq SINE Alu -74 239 1 226 276 48 38 chr2 115057318 115057423 -135630431 - MLT1J LTR MaLR -321 190 85 226 170 38 19 chr2 115059177 115059230 -135628624 + GA-rich Low_complexity Low_complexity 3 56 0 1852 162 11 42 chr2 115059258 115059635 -135628219 - MLT1A1 LTR MaLR 0 365 1 223 306 28 0 chr2 115060374 115060446 -135627408 - MIR3 SINE MIR -11 197 124 200 302 35 12 chr2 115060521 115060607 -135627247 - MIR SINE MIR -98 164 77 2184 129 17 0 chr2 115062256 115062550 -135625304 - AluSx SINE Alu -13 299 1 628 295 55 9 chr2 115062552 115062877 -135624977 - HAL1 LINE L1 -1159 1348 1009 558 297 94 28 chr2 115063022 115063291 -135624563 - HAL1 LINE L1 -2163 344 49 1266 215 68 49 chr2 115063291 115063658 -135624196 + MLT1A2 LTR MaLR 1 374 0 558 297 94 28 chr2 115063658 115063708 -135624146 - HAL1 LINE L1 -2458 49 4 2605 48 0 6 chr2 115063870 115064183 -135623671 - AluY SINE Alu 0 311 1 599 207 48 35 chr2 115065234 115065379 -135622475 - MER58B DNA MER1_type 0 341 195 253 235 59 12 chr2 115115550 115115635 -135572219 - LTR60 LTR ERV1 -269 317 229 623 154 43 8 chr2 115115635 115115752 -135572102 - LTR60 LTR ERV1 -307 279 159 2676 20 0 0 chr2 115115752 115116056 -135571798 - AluYb8 SINE Alu -10 308 5 534 217 9 0 chr2 115116167 115116273 -135571581 - LTR60 LTR ERV1 -479 107 1 1213 231 91 20 chr2 115116289 115116897 -135570957 + L1MC/D LINE L1 4898 5546 -745 2755 164 54 16 chr2 115116908 115117464 -135570390 + MER34C LTR ERV1 7 583 -2 521 256 21 21 chr2 115117466 115117657 -135570197 + L1MC/D LINE L1 5575 5765 -2020 3963 141 73 33 chr2 115117866 115118506 -135569348 + MER72 LTR ERV1 1 673 -49 2171 108 3 3 chr2 115118506 115118813 -135569041 + AluSq SINE Alu 3 309 -4 3963 141 73 33 chr2 115118813 115118866 -135568988 + MER72 LTR ERV1 673 722 0 906 257 59 44 chr2 115119268 115119606 -135568248 + MER72-int LTR ERV1 173 515 -4421 660 263 23 28 chr2 115119581 115119946 -135567908 + MER72-int LTR ERV1 620 1063 -3873 * 2189 181 165 35 chr2 115119952 115120303 -135567551 - MLT2B3 LTR ERVL -3 551 118 2231 141 41 6 chr2 115120303 115120665 -135567189 - THE1C LTR MaLR 0 375 1 2189 181 165 35 chr2 115120665 115120799 -135567055 - MLT2B3 LTR ERVL -436 118 3 339 206 29 0 chr2 115120824 115120892 -135566962 - MLT2B3 LTR ERVL -482 72 3 339 206 29 0 chr2 115120917 115120985 -135566869 - MLT2B3 LTR ERVL -482 72 3 339 206 29 0 chr2 115121010 115121078 -135566776 - MLT2B3 LTR ERVL -482 72 3 323 221 29 0 chr2 115121103 115121171 -135566683 - MLT2B3 LTR ERVL -482 72 3 337 206 29 0 chr2 115121196 115121264 -135566590 - MLT2B3 LTR ERVL -482 72 3 417 147 29 0 chr2 115121289 115121357 -135566497 - MLT2B3 LTR ERVL -482 72 3 335 206 29 0 chr2 115121382 115121450 -135566404 - MLT2B3 LTR ERVL -482 72 3 333 167 61 0 chr2 115121475 115121541 -135566313 - MLT2B3 LTR ERVL -482 72 3 344 191 29 0 chr2 115121566 115121634 -135566220 - MLT2B3 LTR ERVL -482 72 3 330 221 29 0 chr2 115121659 115121727 -135566127 - MLT2B3 LTR ERVL -482 72 3 391 162 29 0 chr2 115121752 115121820 -135566034 - MLT2B3 LTR ERVL -482 72 3 423 143 29 0 chr2 115121843 115121913 -135565941 - MLT2B3 LTR ERVL -480 74 3 331 221 29 0 chr2 115121938 115122006 -135565848 - MLT2B3 LTR ERVL -482 72 3 1562 208 20 27 chr2 115122009 115122456 -135565398 + MER72-int LTR ERV1 1063 1506 -3430 1244 193 88 64 chr2 115123062 115123529 -135564325 + MER72-int LTR ERV1 1699 2176 -2760 3066 216 45 92 chr2 115123556 115123757 -135564097 + MER72-int LTR ERV1 2939 3148 -1788 2098 104 0 0 chr2 115123757 115124058 -135563796 + AluY SINE Alu 2 302 0 3066 216 45 92 chr2 115124058 115124849 -135563005 + MER72-int LTR ERV1 3148 3873 -1063 387 0 0 0 chr2 115124905 115124948 -135562906 + (TG)n Simple_repeat Simple_repeat 2 44 0 1316 262 44 8 chr2 115124968 115125330 -135562524 + LTR10C LTR ERV1 188 562 -29 1749 204 13 19 chr2 115125373 115125745 -135562109 + MER72-int LTR ERV1 3859 4228 -708 276 253 27 40 chr2 115125765 115125840 -135562014 + AluSp SINE Alu 97 170 -133 1325 161 0 0 chr2 115125848 115126071 -135561783 + AluJb SINE Alu 68 290 -22 272 191 9 91 chr2 115126074 115126184 -135561670 + MER72-int LTR ERV1 4275 5671 -561 5072 221 171 23 chr2 115126311 115126716 -135561138 + L1MC3 LINE L1 5762 6106 -1679 1753 182 34 61 chr2 115126716 115127160 -135560694 + MSTB1 LTR MaLR 1 432 0 5072 221 171 23 chr2 115127160 115128516 -135559338 + L1MC3 LINE L1 6106 7784 -1 616 141 0 10 chr2 115129384 115129483 -135558371 + MER4A LTR ERV1 1 98 -566 1750 159 6 7 chr2 115129483 115129829 -135558025 + MER4A LTR ERV1 261 664 0 198 311 0 0 chr2 115130574 115130693 -135557161 + (CCCTAA)n Simple_repeat Simple_repeat 1 119 0 675 291 69 64 chr2 115130932 115131337 -135556517 + MLT1I LTR MaLR 3 409 0 22 35 0 0 chr2 115132481 115132510 -135555344 + AT_rich Low_complexity Low_complexity 1 29 0 206 188 38 25 chr2 115133459 115133539 -135554315 + (CAAA)n Simple_repeat Simple_repeat 2 82 0 203 108 54 0 chr2 115133705 115133742 -135554112 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 866 282 18 0 chr2 115133870 115134090 -135553764 + MER58A DNA MER1_type 1 224 0 286 297 22 0 chr2 115134810 115134901 -135552953 + MIR SINE MIR 54 146 -116 935 74 16 46 chr2 115135273 115135530 -135552324 + (CCCTAA)n Simple_repeat Simple_repeat 6 250 0 199 182 30 0 chr2 115136011 115136044 -135551810 + L3b LINE CR1 1524 1557 -26 280 267 127 30 chr2 115136288 115136453 -135551401 + L2 LINE L2 2448 2628 -686 609 75 54 11 chr2 115136492 115136585 -135551269 + MER4A LTR ERV1 3 99 -565 1481 113 128 26 chr2 115136636 115136902 -135550952 + MER4A LTR ERV1 372 664 0 605 104 31 10 chr2 115137040 115137136 -135550718 + MER4A LTR ERV1 1 98 -566 1815 126 26 22 chr2 115137136 115137480 -135550374 + MER4A LTR ERV1 261 664 0 870 129 54 0 chr2 115138414 115138561 -135549293 + FRAM SINE Alu 8 162 -14 228 35 0 0 chr2 115140234 115140263 -135547591 + (TC)n Simple_repeat Simple_repeat 2 30 0 2317 69 0 13 chr2 115140301 115140605 -135547249 - AluY SINE Alu -11 300 1 658 89 11 0 chr2 115141176 115141266 -135546588 + AluJ/FRAM SINE Alu 214 304 -8 2035 109 17 7 chr2 115141669 115141962 -135545892 - AluSx SINE Alu -16 296 1 397 286 39 39 chr2 115142846 115143000 -135544854 - L2 LINE L2 -220 3093 2940 349 260 52 0 chr2 115143040 115143136 -135544718 - L2 LINE L2 -547 2767 2667 998 92 172 17 chr2 115143159 115143333 -135544521 - AluSg SINE Alu -109 201 1 318 304 36 9 chr2 115143946 115144058 -135543796 + MIR SINE MIR 8 122 -140 251 218 28 113 chr2 115144101 115144243 -135543611 - MER5B DNA MER1_type -41 137 8 2270 82 0 3 chr2 115146585 115146876 -135540978 + AluSq SINE Alu 1 290 -23 275 229 156 31 chr2 115147076 115147172 -135540682 - MLT1G1 LTR MaLR -141 449 342 387 280 196 40 chr2 115147218 115147468 -135540386 - MLT1G1 LTR MaLR -305 290 2 2663 27 0 3 chr2 115147469 115147765 -135540089 + AluY SINE Alu 1 295 -16 2169 95 3 74 chr2 115149335 115149671 -135538183 + AluSx SINE Alu 1 312 0 25 51 0 0 chr2 115149713 115149752 -135538102 + AT_rich Low_complexity Low_complexity 1 39 0 1776 182 13 3 chr2 115149754 115150062 -135537792 + AluJb SINE Alu 1 311 -1 2076 119 0 21 chr2 115150087 115150372 -135537482 + AluSx SINE Alu 1 279 -33 1697 142 0 0 chr2 115150379 115150618 -135537236 + AluSx SINE Alu 59 297 -15 1353 171 82 48 chr2 115150630 115150923 -135536931 + AluJo SINE Alu 9 311 -1 2189 129 0 3 chr2 115151128 115151430 -135536424 - AluSq SINE Alu -12 301 1 216 0 0 0 chr2 115153230 115153254 -135534600 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 2247 76 45 0 chr2 115153401 115153691 -135534163 - AluSc SINE Alu -6 303 1 582 233 151 27 chr2 115154606 115154825 -135533029 - LTR16A1 LTR ERVL -12 445 200 576 336 79 53 chr2 115155156 115155703 -135532151 - ERVL LTR ERVL -471 5293 4733 1061 325 80 31 chr2 115155802 115156582 -135531272 + L1ME LINE L1 2 1440 -5128 2120 182 86 48 chr2 115156596 115156680 -135531174 + L1MA10 LINE L1 5748 5827 -507 2316 49 10 35 chr2 115156680 115156997 -135530857 + AluY SINE Alu 1 310 0 2120 182 86 48 chr2 115156997 115157433 -135530421 + L1MA10 LINE L1 5827 6289 -45 2966 171 67 5 chr2 115157447 115158056 -135529798 + L1MB8 LINE L1 5315 5964 -214 1806 196 0 0 chr2 115158212 115158518 -135529336 + AluJo SINE Alu 5 310 -2 284 263 11 11 chr2 115158522 115158617 -135529237 + L1ME LINE L1 4257 4351 -2293 2577 50 0 10 chr2 115158618 115158920 -135528934 + AluY SINE Alu 1 299 -12 2275 84 0 14 chr2 115158927 115159223 -135528631 + AluSg SINE Alu 1 292 -18 1303 257 16 19 chr2 115159230 115159603 -135528251 + L1MC3 LINE L1 6490 6861 -924 680 169 0 56 chr2 115159628 115159770 -135528084 + AluJo SINE Alu 4 137 -175 21 0 0 0 chr2 115159770 115159791 -135528063 + AT_rich Low_complexity Low_complexity 1 21 0 1988 219 78 30 chr2 115159791 115160395 -135527459 + L1MC3 LINE L1 6868 7500 -285 1733 225 99 54 chr2 115160436 115160802 -135527052 + L1ME LINE L1 4334 4682 -1962 2256 128 0 0 chr2 115160802 115161108 -135526746 + AluSx SINE Alu 1 306 -6 1733 225 99 54 chr2 115161108 115161425 -135526429 + L1ME LINE L1 4682 5048 -1596 2160 222 20 58 chr2 115161827 115161961 -135525893 + L1ME LINE L1 4992 5129 -1515 3403 143 28 30 chr2 115161961 115162631 -135525223 - L1MA8 LINE L1 -3 6288 5620 2482 71 3 0 chr2 115162640 115162935 -135524919 - AluY SINE Alu -15 296 1 2160 222 20 58 chr2 115162935 115163273 -135524581 + L1ME LINE L1 5137 5447 -1197 2341 102 0 10 chr2 115163273 115163578 -135524276 + AluSq SINE Alu 1 302 -11 2160 222 20 58 chr2 115163578 115163737 -135524117 + L1ME LINE L1 5447 5610 -1034 471 210 190 30 chr2 115163742 115163847 -135524007 + L1ME1 LINE L1 4287 4374 -1772 180 0 0 0 chr2 115163847 115163867 -135523987 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 471 210 190 30 chr2 115163867 115163961 -135523893 + L1ME1 LINE L1 4374 4518 -1628 * 995 212 21 5 chr2 115163950 115164337 -135523517 + L1ME1 LINE L1 5093 5484 -682 36776 29 4 145 chr2 115164340 115171516 -135516338 + L1PA4 LINE L1 1 6155 0 2016 251 53 23 chr2 115171514 115172132 -135515722 + L1ME1 LINE L1 5467 6103 -63 * 454 250 10 0 chr2 115172125 115172225 -135515629 + L1ME LINE L1 6096 6196 -468 * 253 305 12 0 chr2 115173610 115173692 -135514162 + L1MC/D LINE L1 5450 5532 -2276 1716 96 4 9 chr2 115175200 115175429 -135512425 - AluSg/x SINE Alu 0 310 83 200 203 31 0 chr2 115176327 115176391 -135511463 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 501 144 0 0 chr2 115176603 115176693 -135511161 + (TGGGGG)n Simple_repeat Simple_repeat 1 90 0 2650 37 0 0 chr2 115178329 115178629 -135509225 + AluY SINE Alu 1 300 -11 196 308 0 0 chr2 115178896 115178948 -135508906 + L2 LINE L2 3218 3269 -3 2612 53 0 0 chr2 115179100 115179401 -135508453 - AluY SINE Alu -10 301 1 2305 92 0 14 chr2 115179519 115179814 -135508040 - AluSq SINE Alu -22 291 1 415 237 51 17 chr2 115181221 115181339 -135506515 - MIR3 SINE MIR -6 202 81 1849 167 17 0 chr2 115185259 115185553 -135502301 + AluSq SINE Alu 3 301 -12 1528 173 60 14 chr2 115186508 115186791 -135501063 + AluJo SINE Alu 1 296 -16 43 35 0 0 chr2 115188459 115188516 -135499338 + AT_rich Low_complexity Low_complexity 1 57 0 26 0 0 0 chr2 115188867 115188893 -135498961 + AT_rich Low_complexity Low_complexity 1 26 0 22 88 0 0 chr2 115190279 115190336 -135497518 + GC_rich Low_complexity Low_complexity 1 57 0 214 172 16 47 chr2 115190575 115190639 -135497215 + G-rich Low_complexity Low_complexity 5 66 0 24 32 0 0 chr2 115190747 115190778 -135497076 + GC_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr2 115190870 115190896 -135496958 + GC_rich Low_complexity Low_complexity 1 26 0 239 157 20 0 chr2 115191624 115191675 -135496179 + (CA)n Simple_repeat Simple_repeat 1 52 0 188 253 172 0 chr2 115194200 115194287 -135493567 + L2 LINE L2 2398 2499 -815 248 314 12 12 chr2 115196539 115196625 -135491229 + MIR SINE MIR 106 191 -71 500 286 85 23 chr2 115196976 115197235 -135490619 + MLT1K LTR MaLR 12 286 -302 280 177 32 32 chr2 115197642 115197704 -135490150 - L2 LINE L2 -1 3312 3251 26 0 0 0 chr2 115201048 115201074 -135486780 + GC_rich Low_complexity Low_complexity 1 26 0 243 172 0 97 chr2 115201299 115201392 -135486462 + G-rich Low_complexity Low_complexity 5 88 0 207 333 26 35 chr2 115203181 115203295 -135484559 + L3 LINE CR1 768 880 -697 184 356 13 60 chr2 115203499 115203648 -135484206 - MIR SINE MIR -81 181 40 232 270 32 79 chr2 115204347 115204473 -135483381 + L2 LINE L2 2992 3111 -161 534 180 18 9 chr2 115204602 115204713 -135483141 + MIR SINE MIR 79 190 -72 361 331 114 30 chr2 115204956 115205385 -135482469 - L2 LINE L2 -1136 2178 1714 320 288 93 8 chr2 115207760 115207878 -135479976 + MIR SINE MIR 102 229 -33 224 347 21 42 chr2 115208589 115208733 -135479121 + L3 LINE CR1 185 325 -1252 436 286 16 28 chr2 115210396 115210578 -135477276 + (CACG)n Simple_repeat Simple_repeat 1 180 0 359 318 11 28 chr2 115210639 115210818 -135477036 + (CACG)n Simple_repeat Simple_repeat 3 178 0 297 310 34 107 chr2 115212329 115212519 -135475335 - HAL1 LINE L1 -885 1622 1420 2037 145 0 0 chr2 115212519 115212822 -135475032 - AluJb SINE Alu -9 303 1 297 310 34 107 chr2 115212822 115213183 -135474671 - HAL1 LINE L1 -1087 1420 1111 328 264 81 90 chr2 115213190 115213298 -135474556 - L1ME LINE L1 -4851 1576 1468 2268 86 7 3 chr2 115213298 115213601 -135474253 + AluSg SINE Alu 1 304 -6 328 264 81 90 chr2 115213601 115213790 -135474064 - L1ME LINE L1 -4959 1468 926 2216 71 7 45 chr2 115214336 115214646 -135473208 + AluSq SINE Alu 16 313 0 184 312 46 9 chr2 115215021 115215130 -135472724 - MIR SINE MIR -75 133 21 200 200 0 0 chr2 115215183 115215218 -135472636 + (CA)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr2 115215785 115215807 -135472047 + GC_rich Low_complexity Low_complexity 1 22 0 786 286 182 5 chr2 115218824 115219237 -135468617 - L2 LINE L2 -5 3308 2823 430 328 55 0 chr2 115219254 115219382 -135468472 + L2 LINE L2 3138 3272 0 191 226 0 16 chr2 115219559 115219621 -135468233 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 190 315 208 15 chr2 115219800 115219930 -135467924 + MIR3 SINE MIR 49 203 -5 312 279 78 26 chr2 115221070 115221224 -135466630 + MIR SINE MIR 72 233 -29 214 354 0 0 chr2 115221437 115221502 -135466352 + L2 LINE L2 3197 3261 -11 228 221 19 29 chr2 115223863 115223967 -135463887 + (CCCCG)n Simple_repeat Simple_repeat 3 105 0 29 47 0 0 chr2 115224057 115224100 -135463754 + GC_rich Low_complexity Low_complexity 1 43 0 24 0 0 0 chr2 115224151 115224175 -135463679 + GC_rich Low_complexity Low_complexity 1 24 0 267 342 40 40 chr2 115225586 115225735 -135462119 + MIR SINE MIR 78 226 -36 192 233 83 0 chr2 115225978 115226038 -135461816 - MIR SINE MIR -95 167 103 487 250 37 0 chr2 115226930 115227038 -135460816 - MER81 DNA DNA -2 112 1 771 284 6 0 chr2 115227289 115227472 -135460382 - MER58A DNA MER1_type 0 224 41 5630 211 84 95 chr2 115227474 115228156 -135459698 + L1MB5 LINE L1 2201 2889 -3285 1708 160 13 10 chr2 115228156 115228456 -135459398 + AluJb SINE Alu 11 311 -1 5630 211 84 95 chr2 115228456 115228628 -135459226 + L1MB5 LINE L1 2889 3061 -3113 2247 117 0 0 chr2 115228628 115228937 -135458917 + AluSp SINE Alu 1 309 -4 5630 211 84 95 chr2 115228937 115228948 -135458906 + L1MB5 LINE L1 3061 3071 -3103 822 158 7 14 chr2 115228948 115229087 -135458767 + FLAM_C SINE Alu 6 143 0 2188 104 13 0 chr2 115229089 115229397 -135458457 + AluSp SINE Alu 1 312 -1 5630 211 84 95 chr2 115229397 115230300 -135457554 + L1MB5 LINE L1 3072 3983 -2191 701 108 29 0 chr2 115230300 115230402 -135457452 + U6 snRNA snRNA 1 105 -2 5630 211 84 95 chr2 115230402 115231134 -135456720 + L1MB5 LINE L1 3983 4722 -1452 2213 113 0 0 chr2 115231134 115231435 -135456419 + AluSq SINE Alu 3 303 -10 5630 211 84 95 chr2 115231435 115232765 -135455089 + L1MB5 LINE L1 4722 6122 -52 293 221 93 12 chr2 115233261 115233347 -135454507 + MIR SINE MIR 104 196 -66 228 316 13 13 chr2 115233758 115233837 -135454017 - MIR SINE MIR -119 143 65 2348 88 0 0 chr2 115233845 115234151 -135453703 + AluY SINE Alu 1 306 -5 281 235 102 0 chr2 115237288 115237386 -135450468 + MER81 DNA DNA 1 108 -6 498 264 0 0 chr2 115237787 115237916 -135449938 + C-rich Low_complexity Low_complexity 1 129 0 242 304 237 7 chr2 115244466 115244601 -135443253 + MIR SINE MIR 22 187 -75 246 191 79 40 chr2 115245862 115246014 -135441840 + (CACTG)n Simple_repeat Simple_repeat 1 158 0 271 0 25 25 chr2 115246250 115246290 -135441564 + (CA)n Simple_repeat Simple_repeat 1 40 0 34 63 0 32 chr2 115246860 115246955 -135440899 + GC_rich Low_complexity Low_complexity 1 92 0 45 87 0 0 chr2 115247022 115247137 -135440717 + GC_rich Low_complexity Low_complexity 1 115 0 203 149 43 0 chr2 115247138 115247185 -135440669 + G-rich Low_complexity Low_complexity 6 54 0 225 0 0 0 chr2 115247210 115247235 -135440619 + (CGG)n Simple_repeat Simple_repeat 2 26 0 428 238 22 28 chr2 115247281 115247462 -135440392 + G-rich Low_complexity Low_complexity 1 180 0 280 338 27 20 chr2 115250809 115250957 -135436897 + L2 LINE L2 3139 3287 -26 587 269 118 75 chr2 115251102 115251299 -135436555 - L1MCa LINE L1 -2847 3579 3359 2193 101 10 3 chr2 115251299 115251607 -135436247 - AluSg SINE Alu 0 310 1 587 269 118 75 chr2 115251607 115251758 -135436096 - L1MCa LINE L1 -3067 3359 3216 645 115 42 0 chr2 115251764 115251860 -135435994 - HY3 scRNA scRNA -1 100 1 782 130 68 56 chr2 115251860 115252015 -135435839 - FRAM SINE Alu -7 169 13 457 339 36 70 chr2 115252018 115252065 -135435789 - L1MCa LINE L1 -3171 3255 3208 2197 98 16 3 chr2 115252065 115252370 -135435484 - AluSx SINE Alu -1 311 3 457 339 36 70 chr2 115252370 115252623 -135435231 - L1MCa LINE L1 -3218 3208 2965 909 280 72 14 chr2 115252762 115253208 -135434646 - L1MCa LINE L1 -3501 2925 2454 356 318 80 56 chr2 115253211 115253548 -135434306 - L1MCa LINE L1 -4007 2419 2075 261 0 0 0 chr2 115253626 115253655 -135434199 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 1966 116 0 0 chr2 115253664 115253940 -135433914 - AluSq SINE Alu -37 276 1 1850 141 0 32 chr2 115254003 115254316 -135433538 - AluSx SINE Alu -9 303 1 396 347 21 0 chr2 115254333 115254526 -135433328 - L1MCa LINE L1 -5281 1135 939 385 276 188 22 chr2 115254741 115254922 -135432932 - MIR SINE MIR -8 254 44 2361 73 0 0 chr2 115254974 115255275 -135432579 + AluY SINE Alu 1 301 -10 259 318 53 23 chr2 115255581 115255713 -135432141 + MIR SINE MIR 32 167 -95 314 260 52 10 chr2 115255795 115255891 -135431963 + MIR SINE MIR 162 261 -1 1879 146 3 0 chr2 115256045 115256340 -135431514 + AluJb SINE Alu 1 296 -16 344 222 0 0 chr2 115256485 115256557 -135431297 - L1MB2 LINE L1 -3 6168 6097 272 190 17 0 chr2 115256565 115256623 -135431231 + HY1 scRNA scRNA 53 111 -1 35 24 0 0 chr2 115256623 115256665 -135431189 + AT_rich Low_complexity Low_complexity 1 42 0 2100 128 0 0 chr2 115256665 115256961 -135430893 - AluSx SINE Alu -16 296 1 869 253 35 47 chr2 115257122 115257244 -135430610 - L1M4 LINE L1 -766 5380 5258 2203 88 0 3 chr2 115257244 115257549 -135430305 - AluY SINE Alu -7 304 1 869 253 35 47 chr2 115257549 115257766 -135430088 - L1M4 LINE L1 -888 5258 5045 245 121 45 106 chr2 115257772 115257803 -135430051 - FAM SINE Alu -136 179 152 1608 138 97 0 chr2 115257803 115258072 -135429782 + AluSx SINE Alu 1 295 -17 245 121 45 106 chr2 115258072 115258106 -135429748 - FAM SINE Alu -163 152 118 342 267 0 25 chr2 115258106 115258226 -135429628 - L1M4 LINE L1 -1121 5025 4909 983 164 128 4 chr2 115258245 115258471 -135429383 - L1MB4 LINE L1 -1 6179 5926 1482 171 44 169 chr2 115258472 115258884 -135428970 - L1M4 LINE L1 -1227 4919 4457 577 172 0 0 chr2 115258884 115258983 -135428871 - FLAM_A SINE Alu -4 138 40 1482 171 44 169 chr2 115258983 115259119 -135428735 - L1M4 LINE L1 -1689 4457 4306 2169 110 13 3 chr2 115259119 115259429 -135428425 - AluSq SINE Alu 0 313 1 1482 171 44 169 chr2 115259429 115259464 -135428390 - L1M4 LINE L1 -1840 4306 4336 1718 125 0 46 chr2 115259464 115259744 -135428110 - AluJb SINE Alu -2 310 44 1482 171 44 169 chr2 115259744 115259813 -135428041 - L1M4 LINE L1 -1809 4337 4261 1350 190 16 12 chr2 115259814 115260072 -135427782 - AluSx SINE Alu -14 298 40 1753 148 62 34 chr2 115260072 115260279 -135427575 + L1MA8 LINE L1 5836 6061 -230 2138 85 7 0 chr2 115260279 115260584 -135427270 + AluY SINE Alu 2 308 0 1753 148 62 34 chr2 115260584 115260759 -135427095 + L1MA8 LINE L1 6061 6230 -61 986 288 82 72 chr2 115260969 115261345 -135426509 - L1MEd LINE L1 -5168 951 580 2352 80 0 10 chr2 115261345 115261659 -135426195 - AluY SINE Alu 0 311 1 986 288 82 72 chr2 115261659 115261717 -135426137 - L1MEd LINE L1 -5539 580 524 2018 138 3 3 chr2 115261717 115262022 -135425832 + AluSx SINE Alu 1 305 -7 2260 90 0 3 chr2 115262025 115262326 -135425528 + AluSp SINE Alu 1 300 -13 986 288 82 72 chr2 115262326 115262629 -135425225 - L1MEd LINE L1 -5596 523 224 2272 80 7 3 chr2 115262629 115262930 -135424924 + AluSq SINE Alu 1 302 -11 2011 115 3 35 chr2 115262937 115263250 -135424604 + AluSg SINE Alu 1 303 -7 986 288 82 72 chr2 115263250 115263302 -135424552 - L1MEd LINE L1 -5900 219 34 229 324 48 0 chr2 115263609 115263714 -135424140 - LTR67 LTR ERVL 0 557 448 558 263 68 0 chr2 115263873 115264064 -135423790 + MLT1J2 LTR MaLR 70 275 -171 1636 162 21 7 chr2 115264074 115264364 -135423490 + AluJo SINE Alu 4 297 -15 714 301 47 47 chr2 115264466 115264567 -135423287 - ERVL LTR ERVL -3511 2253 2153 1564 175 53 0 chr2 115264567 115264852 -135423002 + AluJb SINE Alu 1 300 -12 714 301 47 47 chr2 115264852 115265109 -135422745 - ERVL LTR ERVL -3610 2154 1895 2321 100 0 0 chr2 115266154 115266464 -135421390 + AluSg SINE Alu 1 310 0 1711 158 3 10 chr2 115266535 115266832 -135421022 + AluJb SINE Alu 1 295 -17 2031 136 0 0 chr2 115266832 115267125 -135420729 + AluSx SINE Alu 1 294 -18 1308 122 5 0 chr2 115267164 115267353 -135420501 - AluSp SINE Alu -122 191 2 201 372 0 21 chr2 115267813 115267873 -135419981 - MIR SINE MIR -48 214 155 3867 122 9 2 chr2 115267873 115268423 -135419431 + MER41A LTR ERV1 1 554 0 201 372 0 21 chr2 115268423 115268456 -135419398 - MIR SINE MIR -107 155 123 1734 130 5 72 chr2 115268509 115268879 -135418975 - MER4A LTR ERV1 0 664 261 627 131 0 10 chr2 115268879 115268978 -135418876 - MER4A LTR ERV1 -566 98 1 4960 103 64 30 chr2 115268988 115269384 -135418470 - MER4A-int LTR ERV1 -5 6593 6212 2178 103 7 10 chr2 115269384 115269694 -135418160 + AluSc SINE Alu 1 309 0 4960 103 64 30 chr2 115269694 115269852 -135418002 - MER4A-int LTR ERV1 -386 6212 6061 2204 69 40 16 chr2 115269852 115270155 -135417699 - AluY SINE Alu -1 310 1 4960 103 64 30 chr2 115270155 115270442 -135417412 - MER4A-int LTR ERV1 -537 6061 5718 2171 89 0 38 chr2 115270442 115270757 -135417097 - AluY SINE Alu -8 303 1 4960 103 64 30 chr2 115270757 115270786 -135417068 - MER4A-int LTR ERV1 -880 5718 5691 5709 87 58 18 chr2 115271005 115272039 -135415815 - MER4A-int LTR ERV1 -956 4990 3837 3859 134 60 36 chr2 115272038 115272332 -135415522 - MER4A-int LTR ERV1 -2917 3681 3395 * 2422 48 0 3 chr2 115272332 115272625 -135415229 - AluY SINE Alu -19 292 1 3859 134 60 36 chr2 115272625 115273117 -135414737 - MER4A-int LTR ERV1 -3203 3395 2867 2144 93 17 3 chr2 115273117 115273407 -135414447 + AluSx SINE Alu 1 294 -18 3859 134 60 36 chr2 115273407 115273543 -135414311 - MER4A-int LTR ERV1 -3731 2867 2736 1363 127 76 4 chr2 115273545 115273782 -135414072 + LTR8 LTR ERV1 4 257 -434 1983 68 119 44 chr2 115273782 115274133 -135413721 - MER4A-int LTR ERV1 -4103 2495 2104 2105 93 4 4 chr2 115274133 115274446 -135413408 - AluSg SINE Alu 0 313 1 1983 68 119 44 chr2 115274446 115274521 -135413333 - MER4A-int LTR ERV1 -4494 2104 2036 380 157 0 14 chr2 115274528 115274598 -135413256 - Alu SINE Alu -7 294 226 1054 99 0 12 chr2 115274645 115274816 -135413038 - MER4A-int LTR ERV1 -6404 354 186 972 279 90 35 chr2 115274812 115275054 -135412800 - MER4A-int LTR ERV1 -4107 2224 1954 * 2372 78 0 7 chr2 115275054 115275361 -135412493 - AluSq SINE Alu -8 305 1 972 279 90 35 chr2 115275361 115275484 -135412370 - MER4A-int LTR ERV1 -4377 1954 1839 259 210 0 16 chr2 115275624 115275686 -135412168 - MER4A-int LTR ERV1 -5912 686 626 2649 83 76 12 chr2 115275753 115276163 -135411691 - MER4A-int LTR ERV1 -6162 436 1 1520 153 4 27 chr2 115276166 115276428 -135411426 - MER4A LTR ERV1 0 664 409 254 128 21 21 chr2 115276412 115276459 -135411395 - MER4A LTR ERV1 -357 307 261 * 659 111 0 10 chr2 115276459 115276558 -135411296 - MER4A LTR ERV1 -566 98 1 191 258 16 0 chr2 115276651 115276713 -135411141 - L2 LINE L2 -339 2975 2913 1401 191 89 3 chr2 115276746 115277050 -135410804 - MER31A LTR ERV1 0 485 156 1906 137 6 48 chr2 115277053 115277390 -135410464 + LTR8 LTR ERV1 1 323 -368 282 23 0 93 chr2 115277390 115277433 -135410421 + LTR8 LTR ERV1 285 323 -368 282 23 0 93 chr2 115277433 115277476 -135410378 + LTR8 LTR ERV1 285 323 -368 259 24 0 98 chr2 115277478 115277519 -135410335 + LTR8 LTR ERV1 287 323 -368 266 47 0 93 chr2 115277519 115277562 -135410292 + LTR8 LTR ERV1 285 323 -368 266 47 0 93 chr2 115277562 115277605 -135410249 + LTR8 LTR ERV1 285 323 -368 255 32 0 0 chr2 115277605 115277636 -135410218 + LTR8 LTR ERV1 285 315 -376 255 32 0 0 chr2 115277648 115277679 -135410175 + LTR8 LTR ERV1 285 315 -376 341 0 0 0 chr2 115277691 115277730 -135410124 + LTR8 LTR ERV1 285 323 -368 316 26 0 0 chr2 115277730 115277769 -135410085 + LTR8 LTR ERV1 285 323 -368 341 0 0 0 chr2 115277769 115277808 -135410046 + LTR8 LTR ERV1 285 323 -368 341 0 0 0 chr2 115277808 115277847 -135410007 + LTR8 LTR ERV1 285 323 -368 306 51 0 0 chr2 115277847 115277886 -135409968 + LTR8 LTR ERV1 285 323 -368 282 23 0 93 chr2 115277886 115277929 -135409925 + LTR8 LTR ERV1 285 323 -368 316 26 0 0 chr2 115277929 115277968 -135409886 + LTR8 LTR ERV1 285 323 -368 330 26 0 0 chr2 115277968 115278007 -135409847 + LTR8 LTR ERV1 285 323 -368 2861 109 2 12 chr2 115278007 115278418 -135409436 + LTR8 LTR ERV1 285 691 0 557 106 75 0 chr2 115278429 115278523 -135409331 - MER31A LTR ERV1 -380 105 5 2249 66 0 23 chr2 115278609 115278914 -135408940 + AluY SINE Alu 1 298 -13 751 221 77 5 chr2 115280441 115280636 -135407218 + LTR23 LTR ERV1 4 212 -225 749 158 116 14 chr2 115280637 115280783 -135407071 + AluSg/x SINE Alu 135 295 -15 2348 98 0 0 chr2 115280803 115281110 -135406744 - AluSx SINE Alu -5 307 1 868 145 7 7 chr2 115281111 115281256 -135406598 + LTR23 LTR ERV1 280 424 -13 1467 240 39 43 chr2 115281258 115281587 -135406267 + L1MB8 LINE L1 5739 6067 -111 2142 107 0 7 chr2 115281587 115281887 -135405967 + AluSx SINE Alu 1 298 -14 1467 240 39 43 chr2 115281887 115281999 -135405855 + L1MB8 LINE L1 6067 6178 0 2376 47 0 20 chr2 115282051 115282351 -135405503 + AluY SINE Alu 1 294 -17 696 189 0 0 chr2 115282396 115282507 -135405347 + FRAM SINE Alu 40 150 -26 2150 106 0 0 chr2 115282551 115282844 -135405010 - AluSx SINE Alu -19 293 1 198 0 0 0 chr2 115284393 115284415 -135403439 + (GGGA)n Simple_repeat Simple_repeat 1 22 0 300 306 0 44 chr2 115284770 115284953 -135402901 + C-rich Low_complexity Low_complexity 2 176 0 225 180 0 0 chr2 115285176 115285226 -135402628 + (CACCC)n Simple_repeat Simple_repeat 4 53 0 301 151 0 141 chr2 115288393 115288599 -135399255 + (CCCG)n Simple_repeat Simple_repeat 4 180 0 195 42 0 0 chr2 115288697 115288721 -135399133 + (CCCCG)n Simple_repeat Simple_repeat 5 28 0 25 75 0 0 chr2 115289156 115289209 -135398645 + GC_rich Low_complexity Low_complexity 1 53 0 303 277 75 0 chr2 115289344 115289438 -135398416 - MER112 DNA MER1_type -19 241 141 1117 343 177 12 chr2 115289614 115290460 -135397394 + L2 LINE L2 1801 2786 -528 2113 75 33 13 chr2 115290605 115290910 -135396944 - AluY SINE Alu 0 311 1 686 202 0 8 chr2 115290970 115291089 -135396765 - FLAM_A SINE Alu -15 118 1 2079 121 3 10 chr2 115291114 115291419 -135396435 - AluSx SINE Alu -9 303 1 391 261 190 70 chr2 115291419 115291540 -135396314 + L2 LINE L2 2989 3094 -219 2338 78 0 0 chr2 115291540 115291835 -135396019 - AluY SINE Alu -16 295 1 1926 118 0 72 chr2 115291843 115291973 -135395881 - AluSg SINE Alu -3 307 169 2514 43 0 7 chr2 115291973 115292277 -135395577 - AluY SINE Alu -6 305 4 1926 118 0 72 chr2 115292277 115292337 -135395517 - AluSg SINE Alu -141 169 106 2215 94 0 7 chr2 115292337 115292636 -135395218 - AluY SINE Alu -14 297 1 1926 118 0 72 chr2 115292636 115292775 -135395079 - AluSg SINE Alu -204 106 1 391 261 190 70 chr2 115292775 115292928 -135394926 + L2 LINE L2 3100 3306 -7 1872 143 20 3 chr2 115293229 115293529 -135394325 - AluJb SINE Alu -1 311 7 279 280 32 11 chr2 115293735 115293828 -135394026 - MIR SINE MIR -5 257 163 385 279 99 12 chr2 115293926 115294098 -135393756 + AluSx SINE Alu 1 187 -115 340 191 32 32 chr2 115294090 115294170 -135393684 + AluS SINE Alu 5 87 -216 * 1919 141 0 10 chr2 115294170 115294468 -135393386 + AluSx SINE Alu 5 299 -13 340 191 32 32 chr2 115294468 115294481 -135393373 + AluS SINE Alu 86 98 -205 998 96 82 7 chr2 115294650 115294824 -135393030 + AluSg/x SINE Alu 126 310 0 239 304 51 29 chr2 115295098 115295236 -135392618 - L2 LINE L2 -929 2385 2245 212 329 68 0 chr2 115295714 115295787 -135392067 - L2 LINE L2 0 3272 3195 835 137 0 0 chr2 115295968 115296092 -135391762 + AluJb SINE Alu 1 124 -188 2554 28 0 0 chr2 115296094 115296385 -135391469 - AluY SINE Alu -20 291 1 180 0 0 0 chr2 115296385 115296405 -135391449 + (T)n Simple_repeat Simple_repeat 1 20 0 2370 82 0 0 chr2 115300555 115300859 -135386995 - AluY SINE Alu -7 304 1 2073 137 0 6 chr2 115300930 115301243 -135386611 - AluJb SINE Alu -1 311 1 2232 80 3 13 chr2 115301251 115301552 -135386302 - AluSx SINE Alu -14 298 1 1238 158 77 23 chr2 115308458 115308718 -135379136 - AluJb SINE Alu -5 307 34 1716 156 25 0 chr2 115308718 115308994 -135378860 - AluJb SINE Alu -29 283 1 25 0 0 0 chr2 115310702 115310727 -135377127 + GC_rich Low_complexity Low_complexity 1 25 0 337 301 89 54 chr2 115313476 115313679 -135374175 + L1 LINE L1 2625 2834 -3312 1027 213 9 22 chr2 115313692 115313922 -135373932 + AluJo SINE Alu 86 312 0 1833 171 82 37 chr2 115314015 115314478 -135373376 - LTR2B LTR ERV1 0 490 7 4170 191 44 38 chr2 115314557 115315505 -135372349 + LTR13 LTR ERVK 1 954 0 2442 59 0 10 chr2 115315549 115315852 -135372002 + AluY SINE Alu 1 300 -11 1606 179 3 7 chr2 115315857 115316142 -135371712 - AluJb SINE Alu -18 294 11 2335 70 0 0 chr2 115316288 115316572 -135371282 - AluSc SINE Alu -25 284 1 302 244 87 26 chr2 115316582 115316697 -135371157 - MER65B LTR ERV1 -407 124 3 1309 122 11 0 chr2 115316697 115316886 -135370968 + AluSg/x SINE Alu 111 301 -11 434 268 144 21 chr2 115316991 115317234 -135370620 - MER65B-int LTR ERV1 -150 4721 4449 189 0 0 0 chr2 115317249 115317270 -135370584 + (TCTA)n Simple_repeat Simple_repeat 4 24 0 738 203 29 0 chr2 115317282 115317420 -135370434 - AluJo SINE Alu -167 145 4 481 221 12 76 chr2 115317474 115317622 -135370232 - MER65-int LTR ERV1 -3066 1805 1762 2311 113 0 0 chr2 115317622 115317933 -135369921 + AluSp SINE Alu 1 311 -2 481 221 12 76 chr2 115317933 115318047 -135369807 - MER65-int LTR ERV1 -3109 1762 1642 1994 123 3 3 chr2 115318097 115318390 -135369464 + AluSx SINE Alu 1 293 -19 182 325 278 0 chr2 115319290 115319441 -135368413 - L2 LINE L2 -944 2370 2178 501 202 109 93 chr2 115319452 115319496 -135368358 + MER58A DNA MER1_type 29 71 -2349 2490 64 0 0 chr2 115319496 115319807 -135368047 + AluY SINE Alu 1 311 0 501 202 109 93 chr2 115319807 115319955 -135367899 + MER58A DNA MER1_type 71 224 0 454 333 59 0 chr2 115320383 115320569 -135367285 + MER93a LTR ERV1 61 257 -145 2118 100 17 0 chr2 115320648 115320938 -135366916 + AluSg SINE Alu 14 308 -2 283 284 0 10 chr2 115320938 115321040 -135366814 + MER41-int LTR ERV1 2840 2940 -3006 959 71 0 8 chr2 115321153 115321279 -135366575 - AluSp SINE Alu -188 125 1 2268 81 3 7 chr2 115322007 115322303 -135365551 - AluSx SINE Alu -15 297 3 648 142 63 39 chr2 115322430 115322557 -135365297 - FLAM_C SINE Alu -1 142 13 2127 109 7 13 chr2 115322557 115322860 -135364994 - AluSx SINE Alu -11 301 1 724 318 13 0 chr2 115322866 115323171 -135364683 + MER93a LTR ERV1 93 401 -1 191 330 23 0 chr2 115323377 115323465 -135364389 - L2 LINE L2 -1234 2080 1991 2444 49 0 3 chr2 115323742 115324048 -135363806 - AluY SINE Alu -6 305 1 2105 108 0 13 chr2 115324171 115324476 -135363378 - AluSx SINE Alu -11 301 1 1811 83 28 0 chr2 115324574 115324828 -135363026 - AluSx SINE Alu -12 300 40 21 36 0 0 chr2 115325055 115325083 -135362771 + GC_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 115327611 115327632 -135360222 + GC_rich Low_complexity Low_complexity 1 21 0 609 230 0 0 chr2 115328358 115328536 -135359318 + (CCCCAG)n Simple_repeat Simple_repeat 3 180 0 843 179 0 0 chr2 115328563 115328742 -135359112 + (CCCCAG)n Simple_repeat Simple_repeat 1 179 0 333 358 103 6 chr2 115331358 115331523 -135356331 + MIR SINE MIR 46 226 -36 287 331 79 0 chr2 115332769 115332896 -135354958 - L3 LINE CR1 -223 1354 1218 410 240 85 92 chr2 115332943 115333060 -135354794 + MIR SINE MIR 4 118 -144 1562 102 0 31 chr2 115333060 115333286 -135354568 + AluSc SINE Alu 1 219 -90 410 240 85 92 chr2 115333286 115333387 -135354467 + MIR SINE MIR 118 218 -44 763 182 70 11 chr2 115333389 115333576 -135354278 + MLT1A1 LTR MaLR 1 198 -167 1755 167 0 14 chr2 115333605 115333915 -135353939 + AluJb SINE Alu 1 306 0 230 53 158 0 chr2 115333916 115333954 -135353900 - AluSx SINE Alu -258 44 1 1937 97 55 15 chr2 115333962 115334291 -135353563 + MER4B-int LTR ERV1 5689 6030 -728 1961 129 0 0 chr2 115334291 115334570 -135353284 - AluSg SINE Alu -31 279 1 2304 84 0 7 chr2 115334601 115334899 -135352955 + AluY SINE Alu 1 296 -15 382 345 58 18 chr2 115334930 115335101 -135352753 + L1M4 LINE L1 4993 5170 -976 2264 106 0 0 chr2 115335101 115335402 -135352452 + AluSx SINE Alu 1 301 -11 1024 86 0 0 chr2 115335402 115335530 -135352324 + AluSc SINE Alu 1 128 -181 2437 43 0 0 chr2 115335530 115335835 -135352019 + AluY SINE Alu 1 305 0 717 159 0 16 chr2 115335835 115335961 -135351893 + MER4B LTR ERV1 475 598 -12 443 179 12 24 chr2 115336048 115336132 -135351722 + AluJ/FLAM SINE Alu 1 83 -229 3025 106 0 64 chr2 115336132 115336481 -135351373 + MER4B LTR ERV1 100 403 -207 2518 57 0 0 chr2 115336481 115336782 -135351072 - AluY SINE Alu -10 301 1 3025 106 0 64 chr2 115336782 115336978 -135350876 + MER4B LTR ERV1 403 610 0 341 333 144 6 chr2 115337117 115337297 -135350557 + MIR SINE MIR 33 237 -25 512 307 20 62 chr2 115337736 115337837 -135350017 + MIR SINE MIR 29 133 -129 2315 94 3 10 chr2 115337837 115338145 -135349709 - AluSp SINE Alu -7 306 1 512 307 20 62 chr2 115338145 115338287 -135349567 + MIR SINE MIR 133 262 0 467 333 33 70 chr2 115338545 115338788 -135349066 + L2 LINE L2 3039 3272 0 2239 87 6 29 chr2 115338831 115339142 -135348712 + AluSq SINE Alu 1 304 -9 244 322 151 7 chr2 115339516 115339814 -135348040 + L2 LINE L2 1830 2170 -1144 2221 97 3 3 chr2 115339816 115340116 -135347738 - AluSx SINE Alu -12 300 1 948 226 23 0 chr2 115340116 115340337 -135347517 - L2 LINE L2 -529 2785 2560 2117 124 3 0 chr2 115340339 115340646 -135347208 + AluSg SINE Alu 2 309 -1 648 269 132 9 chr2 115340647 115340874 -135346980 - L2 LINE L2 -1384 1930 1676 907 201 71 5 chr2 115340908 115341092 -135346762 + AluJo SINE Alu 3 198 -114 354 163 64 35 chr2 115342803 115342975 -135344879 + (AGGTG)n Simple_repeat Simple_repeat 3 179 0 434 136 65 72 chr2 115343006 115343367 -135344487 + (AGGTG)n Simple_repeat Simple_repeat 1 358 0 316 232 43 0 chr2 115343884 115343953 -135343901 + L2 LINE L2 3238 3309 -4 215 321 254 0 chr2 115344339 115344532 -135343322 - L2 LINE L2 -755 2559 2318 2352 83 0 0 chr2 115344834 115345134 -135342720 - AluSx SINE Alu -12 300 1 610 297 99 3 chr2 115345455 115345836 -135342018 + MLT1J1 LTR MaLR 14 446 0 1602 169 56 14 chr2 115345893 115346177 -135341677 - AluJb SINE Alu -15 297 2 2271 91 10 0 chr2 115346485 115346782 -135341072 - AluSc SINE Alu -9 300 1 682 276 135 56 chr2 115347060 115347598 -135340256 + L2 LINE L2 2512 3087 -226 2203 79 41 3 chr2 115347616 115347907 -135339947 - AluY SINE Alu -9 302 1 2198 84 3 10 chr2 115347943 115348240 -135339614 - AluY SINE Alu -16 295 1 1572 179 10 0 chr2 115348240 115348537 -135339317 + Tigger3(Golem) DNA MER2_type 2730 3029 0 285 327 133 0 chr2 115348600 115348713 -135339141 + L2 LINE L2 3133 3260 -12 952 109 0 29 chr2 115348716 115348853 -135339001 + FLAM_C SINE Alu 1 133 0 2204 97 3 3 chr2 115348966 115349264 -135338590 + AluSq SINE Alu 1 298 -15 899 173 35 17 chr2 115353098 115353271 -135334583 - AluSg/x SINE Alu -1 309 134 304 196 28 84 chr2 115353273 115353354 -135334500 + (CCCTAA)n Simple_repeat Simple_repeat 4 75 -63 707 161 17 0 chr2 115353354 115353472 -135334382 - FLAM_C SINE Alu -12 121 2 304 196 28 84 chr2 115353472 115353533 -135334321 + (CCCTAA)n Simple_repeat Simple_repeat 75 138 0 224 253 0 74 chr2 115353824 115353986 -135333868 + G-rich Low_complexity Low_complexity 1 150 0 238 265 235 8 chr2 115354560 115354692 -135333162 - MIR SINE MIR -36 226 65 186 356 78 0 chr2 115354786 115354901 -135332953 + L2 LINE L2 3132 3255 -17 889 200 0 0 chr2 115355492 115355657 -135332197 - FRAM SINE Alu -12 164 1 2288 74 13 13 chr2 115355687 115355998 -135331856 - AluY SINE Alu 0 311 1 23 0 0 0 chr2 115358742 115358765 -135329089 + GC_rich Low_complexity Low_complexity 1 23 0 2122 127 0 3 chr2 115361471 115361770 -135326084 - AluSx SINE Alu -14 298 1 826 180 12 47 chr2 115361780 115361952 -135325902 - AluSg/x SINE Alu 0 312 147 766 103 0 9 chr2 115362692 115362799 -135325055 - FLAM_C SINE Alu -17 126 21 38 51 0 0 chr2 115363093 115363152 -135324702 + GC_rich Low_complexity Low_complexity 1 59 0 25 0 0 0 chr2 115363880 115363905 -135323949 + GC_rich Low_complexity Low_complexity 1 25 0 1343 301 111 46 chr2 115364522 115364774 -135323080 + HERV16 LTR ERVL 1642 1876 -3120 1931 110 52 0 chr2 115364774 115365064 -135322790 + AluSx SINE Alu 3 307 -5 1777 173 10 0 chr2 115365072 115365379 -135322475 + AluJo SINE Alu 1 310 -2 1343 301 111 46 chr2 115365379 115366081 -135321773 + HERV16 LTR ERVL 1882 2668 -2328 1131 343 68 12 chr2 115366158 115367160 -135320694 + HERV16 LTR ERVL 2839 3904 -1750 1238 339 69 47 chr2 115367465 115368369 -135319485 + HERV16 LTR ERVL 4375 5298 -466 566 94 0 0 chr2 115368678 115368763 -135319091 + Alu SINE Alu 223 307 -2 2456 120 45 47 chr2 115369107 115369680 -135318174 + L1M2 LINE L1 5202 5772 -540 2135 82 7 0 chr2 115370043 115370347 -135317507 + AluSp SINE Alu 1 306 0 1555 245 42 15 chr2 115370629 115371200 -135316654 - L1MEc LINE L1 -2434 3781 3192 1496 147 108 7 chr2 115371200 115371550 -135316304 - AluJo SINE Alu 0 312 99 183 42 0 0 chr2 115371550 115371574 -135316280 + (TG)n Simple_repeat Simple_repeat 2 25 0 1496 147 108 7 chr2 115371574 115371685 -135316169 - AluJo SINE Alu -213 99 1 1555 245 42 15 chr2 115371685 115371704 -135316150 - L1MEc LINE L1 -3023 3192 3175 1373 234 30 18 chr2 115371701 115372193 -135315661 - L1MEc LINE L1 -3998 2398 1901 * 1696 164 30 3 chr2 115372193 115372491 -135315363 + AluJb SINE Alu 1 306 -6 710 300 59 32 chr2 115372610 115373343 -135314511 + L1MEd LINE L1 942 1738 -4572 1036 168 11 11 chr2 115373382 115373573 -135314281 + AluJb SINE Alu 122 312 0 386 240 50 0 chr2 115373727 115373848 -135314006 - LTR16C LTR ERVL 0 491 365 1951 132 0 58 chr2 115373950 115374277 -135313577 + AluJb SINE Alu 1 308 -4 2297 53 0 3 chr2 115374357 115374639 -135313215 + AluY SINE Alu 1 281 -30 1959 148 3 3 chr2 115375065 115375363 -135312491 + AluSx SINE Alu 1 298 -14 2361 61 7 0 chr2 115375490 115375784 -135312070 - AluY SINE Alu -15 296 1 254 280 147 32 chr2 115375848 115376005 -135311849 - L2 LINE L2 -1594 1720 1546 1035 268 94 20 chr2 115376106 115376331 -135311523 + MLT1H1 LTR MaLR 1 208 -347 2061 100 0 21 chr2 115376331 115376645 -135311209 + AluSx SINE Alu 1 308 0 1035 268 94 20 chr2 115376645 115376940 -135310914 + MLT1H1 LTR MaLR 208 555 0 1813 180 3 0 chr2 115376971 115377266 -135310588 + AluJb SINE Alu 1 296 -16 198 340 0 10 chr2 115377266 115377366 -135310488 - L2 LINE L2 -2392 922 824 213 376 55 0 chr2 115378110 115378219 -135309635 - MIR SINE MIR -65 143 29 1750 150 44 20 chr2 115378422 115378716 -135309138 + AluJo SINE Alu 5 305 -7 307 406 6 0 chr2 115378794 115378959 -135308895 - L2 LINE L2 -2553 761 596 304 290 109 7 chr2 115379100 115379238 -135308616 - L2 LINE L2 0 3313 3162 845 179 368 9 chr2 115379241 115379464 -135308390 - AluYb8 SINE Alu -15 303 1 2319 93 3 0 chr2 115379683 115379994 -135307860 + AluSx SINE Alu 1 312 0 742 122 7 72 chr2 115380117 115380227 -135307627 + AluJo/FLAM SINE Alu 2 103 -199 2170 86 6 29 chr2 115380227 115380540 -135307314 - AluSc SINE Alu -3 306 1 742 122 7 72 chr2 115380540 115380568 -135307286 + AluJo/FLAM SINE Alu 103 131 -171 22 56 0 0 chr2 115381065 115381101 -135306753 + GC_rich Low_complexity Low_complexity 1 36 0 231 256 26 0 chr2 115381296 115381374 -135306480 + C-rich Low_complexity Low_complexity 6 85 0 29 70 0 0 chr2 115381427 115381484 -135306370 + GC_rich Low_complexity Low_complexity 1 57 0 349 219 7 65 chr2 115381604 115381759 -135306095 + C-rich Low_complexity Low_complexity 5 150 0 479 269 74 79 chr2 115383045 115383398 -135304456 - L2 LINE L2 -1 3271 2921 290 368 26 0 chr2 115383440 115383554 -135304300 - L2 LINE L2 0 3313 3197 300 102 0 0 chr2 115384002 115384051 -135303803 + (GGA)n Simple_repeat Simple_repeat 2 50 0 28 61 0 0 chr2 115385113 115385162 -135302692 + GC_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr2 115385181 115385204 -135302650 + GC_rich Low_complexity Low_complexity 1 23 0 204 222 59 26 chr2 115385232 115385385 -135302469 + (CCGCG)n Simple_repeat Simple_repeat 2 159 0 201 132 0 0 chr2 115385392 115385430 -135302424 + (GGA)n Simple_repeat Simple_repeat 2 39 0 253 221 84 63 chr2 115386963 115387058 -135300796 - L2 LINE L2 0 3272 3176 358 210 210 0 chr2 115389950 115390088 -135297766 + MIR SINE MIR 59 225 -37 2250 98 0 3 chr2 115392577 115392882 -135294972 + AluSx SINE Alu 1 304 -8 220 98 0 39 chr2 115393546 115393597 -135294257 + (CCCCG)n Simple_repeat Simple_repeat 1 49 0 462 387 85 4 chr2 115394606 115394841 -135293013 + L1MC4a LINE L1 5627 5880 -1928 1430 187 12 64 chr2 115394848 115395174 -135292680 + AluJo SINE Alu 3 311 -1 320 109 0 18 chr2 115395174 115395229 -135292625 + (GA)n Simple_repeat Simple_repeat 1 54 0 2593 55 0 0 chr2 115395311 115395622 -135292232 + AluY SINE Alu 1 311 0 228 309 36 24 chr2 115395823 115395907 -135291947 + MIR SINE MIR 141 225 -37 2212 93 0 13 chr2 115395976 115396278 -135291576 + AluY SINE Alu 1 298 -13 358 252 89 7 chr2 115396288 115396423 -135291431 - L1ME4a LINE L1 -13 6108 5963 579 156 82 8 chr2 115396507 115396617 -135291237 - Tigger1 DNA MER2_type 0 2418 2297 690 203 0 0 chr2 115396617 115396735 -135291119 + AluJ SINE Alu 1 118 -184 579 156 82 8 chr2 115396735 115396746 -135291108 - Tigger1 DNA MER2_type -121 2297 2288 234 171 26 13 chr2 115396759 115396835 -135291019 + (TA)n Simple_repeat Simple_repeat 1 77 0 1076 185 0 0 chr2 115396835 115397008 -135290846 + AluJ SINE Alu 125 297 -15 389 99 148 0 chr2 115397008 115397089 -135290765 - Tigger1 DNA MER2_type -109 2309 2217 2190 97 0 29 chr2 115397092 115397400 -135290454 + AluSq SINE Alu 3 301 -12 1339 134 26 166 chr2 115397403 115397691 -135290163 + AluYb8 SINE Alu 1 233 -75 1454 81 0 0 chr2 115397691 115397876 -135289978 + AluY SINE Alu 1 185 -126 1339 134 26 166 chr2 115397876 115397937 -135289917 + AluYb8 SINE Alu 233 301 -7 1217 110 0 0 chr2 115397937 115398101 -135289753 + AluSg/x SINE Alu 132 295 -15 2916 106 39 139 chr2 115398102 115398409 -135289445 - Tigger1 DNA MER2_type -193 2225 1889 1693 195 17 0 chr2 115398409 115398706 -135289148 - AluJo SINE Alu -10 302 1 2916 106 39 139 chr2 115398706 115398795 -135289059 - Tigger1 DNA MER2_type -529 1889 1793 894 111 0 15 chr2 115398795 115398916 -135288938 + AluJb SINE Alu 1 121 -191 222 37 0 0 chr2 115398916 115398943 -135288911 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 894 111 0 15 chr2 115398943 115398956 -135288898 + AluJb SINE Alu 121 133 -179 2916 106 39 139 chr2 115398956 115399208 -135288646 - Tigger1 DNA MER2_type -625 1793 1517 2388 73 0 0 chr2 115399208 115399509 -135288345 - AluY SINE Alu -10 301 1 2916 106 39 139 chr2 115399509 115399668 -135288186 - Tigger1 DNA MER2_type -901 1517 1344 2326 77 3 0 chr2 115399668 115399966 -135287888 + AluSq SINE Alu 2 300 -13 2916 106 39 139 chr2 115399966 115400315 -135287539 - Tigger1 DNA MER2_type -1074 1344 640 1455 124 5 5 chr2 115400323 115400541 -135287313 - AluSg/x SINE Alu 0 310 93 2383 63 3 3 chr2 115400911 115401211 -135286643 + AluSp SINE Alu 2 301 -12 262 404 0 16 chr2 115401619 115401802 -135286052 + (CGTG)n Simple_repeat Simple_repeat 1 180 0 246 325 63 0 chr2 115402058 115402184 -135285670 - L1ME3 LINE L1 -30 6132 5999 247 337 84 0 chr2 115402262 115402357 -135285497 + L2 LINE L2 3134 3236 -36 4557 54 35 2 chr2 115402556 115403128 -135284726 - LTR10C LTR ERV1 0 591 1 265 235 53 19 chr2 115403406 115403539 -135284315 - MLT1L LTR MaLR -15 600 362 300 320 6 58 chr2 115404045 115404129 -135283725 - L2 LINE L2 -517 2797 2710 1283 161 38 98 chr2 115404129 115404305 -135283549 - AluJo SINE Alu -14 298 148 2322 103 0 0 chr2 115404305 115404617 -135283237 + AluSx SINE Alu 1 312 0 1283 161 38 98 chr2 115404617 115404757 -135283097 - AluJo SINE Alu -164 148 1 2291 85 3 0 chr2 115404764 115405059 -135282795 - AluSp SINE Alu -17 296 1 300 320 6 58 chr2 115405059 115405138 -135282716 - L2 LINE L2 -610 2704 2635 506 308 47 6 chr2 115405543 115405715 -135282139 + MIR SINE MIR 23 201 -61 297 68 0 0 chr2 115408870 115408914 -135278940 + (CGGGGG)n Simple_repeat Simple_repeat 3 46 0 206 149 57 29 chr2 115409339 115409514 -135278340 + (TG)n Simple_repeat Simple_repeat 1 180 0 333 173 77 12 chr2 115409542 115409710 -135278144 + (TG)n Simple_repeat Simple_repeat 1 179 0 3436 143 42 5 chr2 115409862 115410436 -135277418 + LTR49 LTR ERV1 1 595 0 5194 159 36 41 chr2 115410436 115410929 -135276925 + LTR49-int LTR ERV1 1 495 -5451 2153 189 109 5 chr2 115410929 115411369 -135276485 - MER66B LTR ERV1 0 486 1 5194 159 36 41 chr2 115411369 115411528 -135276326 + LTR49-int LTR ERV1 495 653 -5293 3064 130 23 39 chr2 115411528 115411627 -135276227 - MER84 LTR ERV1 0 507 408 1802 117 109 0 chr2 115411627 115411901 -135275953 + AluSx SINE Alu 1 304 -8 2365 93 0 3 chr2 115411905 115412217 -135275637 + AluSq SINE Alu 2 312 -1 3064 130 23 39 chr2 115412217 115412627 -135275227 - MER84 LTR ERV1 -102 405 1 5194 159 36 41 chr2 115412627 115413358 -135274496 + LTR49-int LTR ERV1 653 1458 -4488 2241 83 0 32 chr2 115413359 115413672 -135274182 - AluSg SINE Alu -7 303 1 991 77 8 0 chr2 115413696 115413826 -135274028 - AluSg SINE Alu -179 131 1 7783 135 14 18 chr2 115413827 115415194 -135272660 + LTR49-int LTR ERV1 1309 2669 -3662 225 208 0 0 chr2 115415194 115415242 -135272612 - MER54B LTR ERVL 0 793 746 712 174 0 0 chr2 115415286 115415401 -135272453 + AluSg/x SINE Alu 190 304 -5 3402 124 16 58 chr2 115415404 115415769 -135272085 + LTR49-int LTR ERV1 2751 3077 -3254 2313 83 0 3 chr2 115415769 115416059 -135271795 + AluSc SINE Alu 2 290 -19 3402 124 16 58 chr2 115416059 115416360 -135271494 + LTR49-int LTR ERV1 3077 3389 -2942 1664 119 12 85 chr2 115416564 115416630 -135271224 + LTR49-int LTR ERV1 3354 3423 -2908 2531 112 25 3 chr2 115416630 115416997 -135270857 - THE1C LTR MaLR 0 375 1 1664 119 12 85 chr2 115416997 115417341 -135270513 + LTR49-int LTR ERV1 3423 3734 -2597 1093 151 25 36 chr2 115417347 115417588 -135270266 + LTR49-int LTR ERV1 4164 4403 -3717 2296 88 0 0 chr2 115417588 115417882 -135269972 + AluSq SINE Alu 1 294 -19 1093 151 25 36 chr2 115417882 115417918 -135269936 + LTR49-int LTR ERV1 4403 4438 -3682 826 191 0 0 chr2 115417920 115418051 -135269803 - FLAM_C SINE Alu -1 132 2 1070 179 5 0 chr2 115418055 115418273 -135269581 + LTR49-int LTR ERV1 4397 4615 -1716 2285 73 3 19 chr2 115418279 115418595 -135269259 - AluY SINE Alu 0 311 1 1556 127 4 2 chr2 115418595 115418890 -135268964 + LTR49-int LTR ERV1 5358 6111 -487 3656 134 24 45 chr2 115419123 115419720 -135268134 + LTR49-int LTR ERV1 5595 6174 -157 1412 196 36 4 chr2 115419720 115420000 -135267854 - AluJb SINE Alu -23 289 1 3656 134 24 45 chr2 115420000 115420155 -135267699 + LTR49-int LTR ERV1 6174 6331 0 3455 130 52 22 chr2 115420155 115420196 -135267658 + LTR49 LTR ERV1 1 39 -556 2118 119 23 0 chr2 115420196 115420498 -135267356 + AluSx SINE Alu 1 309 -3 3455 130 52 22 chr2 115420498 115421034 -135266820 + LTR49 LTR ERV1 39 595 0 262 145 48 16 chr2 115421092 115421154 -135266700 - L1M4 LINE L1 -434 5740 5677 1114 95 6 67 chr2 115421155 115421334 -135266520 - AluSx SINE Alu -144 168 1 2279 100 0 0 chr2 115421517 115421816 -135266038 + AluSq SINE Alu 1 299 -14 2141 114 0 7 chr2 115421994 115422293 -135265561 + AluSx SINE Alu 1 297 -15 2416 59 10 10 chr2 115422295 115422602 -135265252 + AluY SINE Alu 1 307 -4 270 336 50 0 chr2 115423051 115423170 -135264684 + L2 LINE L2 3148 3272 0 1524 165 23 20 chr2 115423354 115423657 -135264197 + AluJo SINE Alu 1 304 -8 2322 106 0 0 chr2 115423856 115424168 -135263686 + AluSx SINE Alu 1 312 0 2058 111 3 19 chr2 115424563 115424870 -135262984 - AluSx SINE Alu -10 302 1 1455 104 0 43 chr2 115424876 115425106 -135262748 - AluSg/x SINE Alu -8 304 85 1830 100 4 12 chr2 115425106 115425223 -135262631 - AluSc SINE Alu -61 248 132 2253 104 7 0 chr2 115425223 115425530 -135262324 - AluSp SINE Alu -4 309 1 1830 100 4 12 chr2 115425530 115425662 -135262192 - AluSc SINE Alu -177 132 1 2293 83 0 3 chr2 115426026 115426338 -135261516 + AluY SINE Alu 1 311 0 2073 110 0 0 chr2 115426369 115426673 -135261181 - AluSc SINE Alu 0 304 1 1474 176 13 93 chr2 115426673 115426782 -135261072 - L1M4 LINE L1 -1005 5141 5025 2269 103 0 0 chr2 115426782 115427082 -135260772 - AluSg SINE Alu -10 300 1 1474 176 13 93 chr2 115427082 115427105 -135260749 - L1M4 LINE L1 -1121 5025 5002 1871 140 10 7 chr2 115427105 115427398 -135260456 + AluJb SINE Alu 1 294 -18 1474 176 13 93 chr2 115427398 115427470 -135260384 - L1M4 LINE L1 -1144 5002 4926 2299 96 0 0 chr2 115427470 115427773 -135260081 - AluSx SINE Alu -9 303 1 1474 176 13 93 chr2 115427773 115427822 -135260032 - L1M4 LINE L1 -1220 4926 4875 2087 136 0 0 chr2 115427822 115428124 -135259730 - AluSx SINE Alu -10 302 1 1474 176 13 93 chr2 115428124 115428273 -135259581 - L1M4 LINE L1 -1271 4875 4776 2093 103 7 0 chr2 115428273 115428575 -135259279 - AluSx SINE Alu 0 304 1 1474 176 13 93 chr2 115428575 115428639 -135259215 - L1M4 LINE L1 -1370 4776 4708 2529 65 0 0 chr2 115428639 115428947 -135258907 - AluY SINE Alu -3 308 1 2211 109 0 3 chr2 115428947 115429250 -135258604 - AluSx SINE Alu -7 305 4 1093 154 0 16 chr2 115429250 115429417 -135258437 - AluSg/x SINE Alu -13 297 132 2338 80 0 7 chr2 115429417 115429719 -135258135 - AluSc SINE Alu -9 300 1 1093 154 0 16 chr2 115429719 115429733 -135258121 - AluSg/x SINE Alu -178 132 119 252 225 11 11 chr2 115429816 115429905 -135257949 - L1M4 LINE L1 -1443 4703 4615 2253 79 3 0 chr2 115429909 115430200 -135257654 - AluSx SINE Alu -20 292 1 1348 96 10 25 chr2 115430201 115430399 -135257455 + AluSg/x SINE Alu 103 297 -13 249 300 20 10 chr2 115430401 115430501 -135257353 + L1MC5 LINE L1 7031 7131 -830 2337 105 0 0 chr2 115431014 115431327 -135256527 - AluSq SINE Alu 0 313 1 253 88 100 0 chr2 115432834 115432914 -135254940 + (CGGGA)n Simple_repeat Simple_repeat 2 89 0 993 246 143 12 chr2 115435196 115435602 -135252252 - MER31B LTR ERV1 0 466 8 1110 137 0 0 chr2 115436304 115436465 -135251389 - AluSg/x SINE Alu -18 292 132 2134 123 3 0 chr2 115436465 115436775 -135251079 - AluSq SINE Alu -2 311 1 22 0 0 0 chr2 115439628 115439650 -135248204 + GC_rich Low_complexity Low_complexity 1 22 0 2326 73 0 13 chr2 115440662 115440975 -135246879 + AluY SINE Alu 3 311 0 805 202 5 77 chr2 115441154 115441362 -135246492 - 7SK RNA RNA 0 193 1 361 323 230 4 chr2 115441362 115441588 -135246266 - L1MC4a LINE L1 -1974 5834 5558 2035 125 20 0 chr2 115441894 115442190 -135245664 - AluSx SINE Alu -8 304 3 2206 115 0 6 chr2 115442192 115442506 -135245348 - AluSx SINE Alu 0 312 1 2430 53 20 3 chr2 115443118 115443421 -135244433 - AluY SINE Alu -3 308 1 2212 96 0 7 chr2 115443869 115444172 -135243682 - AluSx SINE Alu -11 301 1 214 327 98 19 chr2 115444299 115444513 -135243341 - L2 LINE L2 -1806 1508 1278 286 234 16 0 chr2 115444759 115444823 -135243031 - MLT1K LTR MaLR -10 578 514 699 192 0 0 chr2 115444825 115444950 -135242904 + FLAM_C SINE Alu 1 125 -18 2437 81 0 0 chr2 115445174 115445484 -135242370 + AluY SINE Alu 1 310 -1 1965 124 3 0 chr2 115445501 115445807 -135242047 + AluSx SINE Alu 1 307 0 22 0 0 0 chr2 115446617 115446639 -135241215 + GC_rich Low_complexity Low_complexity 1 22 0 261 0 0 0 chr2 115446668 115446697 -135241157 + (CCG)n Simple_repeat Simple_repeat 3 31 0 24 53 0 0 chr2 115446775 115446813 -135241041 + GC_rich Low_complexity Low_complexity 1 38 0 378 179 11 89 chr2 115446935 115447125 -135240729 + (CTGGGG)n Simple_repeat Simple_repeat 4 178 0 270 365 112 0 chr2 115447680 115447858 -135239996 - MIR SINE MIR -32 230 33 484 295 58 0 chr2 115448929 115449112 -135238742 + MIR SINE MIR 16 218 -44 202 204 0 23 chr2 115462204 115462248 -135225606 + (CCCTG)n Simple_repeat Simple_repeat 4 46 0 2371 59 0 20 chr2 115463339 115463645 -135224209 - AluY SINE Alu -11 300 1 419 331 22 46 chr2 115467764 115467855 -135219999 + MIR SINE MIR 11 103 -159 2486 60 0 0 chr2 115467855 115468157 -135219697 - AluY SINE Alu -9 302 1 419 331 22 46 chr2 115468157 115468280 -135219574 + MIR SINE MIR 103 222 -40 1571 274 126 52 chr2 115468348 115468911 -135218943 - L1MEc LINE L1 -3893 2503 1983 2238 98 3 13 chr2 115468911 115469226 -135218628 - AluSx SINE Alu 0 312 1 1571 274 126 52 chr2 115469226 115469567 -135218287 - L1MEc LINE L1 -4413 1983 1669 2229 99 3 0 chr2 115469567 115469869 -135217985 + AluSq SINE Alu 1 303 -10 1571 274 126 52 chr2 115469869 115470299 -135217555 - L1MEc LINE L1 -4727 1669 1069 1670 140 10 57 chr2 115470301 115470615 -135217239 - AluJo SINE Alu -13 299 1 753 153 0 0 chr2 115470719 115470837 -135217017 - FLAM_C SINE Alu -15 118 1 2184 107 0 0 chr2 115471124 115471423 -135216431 - AluSx SINE Alu -12 300 2 254 323 82 25 chr2 115471495 115471777 -135216077 - L1MEc LINE L1 -5968 428 131 327 25 0 0 chr2 115472005 115472045 -135215809 + (TG)n Simple_repeat Simple_repeat 2 41 0 2095 109 0 0 chr2 115472045 115472328 -135215526 - AluSg SINE Alu -27 283 1 1732 77 142 4 chr2 115472476 115472737 -135215117 - AluSp SINE Alu -16 297 1 527 328 64 38 chr2 115472741 115473006 -135214848 - L1MEc LINE L1 -5000 1396 1125 28 29 0 0 chr2 115474657 115474692 -135213162 + GC_rich Low_complexity Low_complexity 1 35 0 198 0 0 0 chr2 115477116 115477138 -135210716 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 37 0 0 0 chr2 115477302 115477339 -135210515 + AT_rich Low_complexity Low_complexity 1 37 0 1922 84 70 11 chr2 115478494 115478779 -135209075 - AluSq SINE Alu -10 303 2 2351 66 0 10 chr2 115478811 115479112 -135208742 + AluY SINE Alu 1 298 -13 212 311 89 22 chr2 115479643 115479778 -135208076 + L2 LINE L2 2873 3016 -297 219 36 0 0 chr2 115484159 115484187 -135203667 + (GGGA)n Simple_repeat Simple_repeat 1 28 0 260 346 73 15 chr2 115488593 115488729 -135199125 - MIR SINE MIR -97 165 22 408 294 124 11 chr2 115490713 115490764 -135197090 - L1M4 LINE L1 -2990 3156 3112 2233 114 0 0 chr2 115490764 115491071 -135196783 - AluSx SINE Alu -5 307 1 408 294 124 11 chr2 115491071 115491301 -135196553 - L1M4 LINE L1 -3034 3112 2843 212 282 82 35 chr2 115491774 115491859 -135195995 + MIR SINE MIR 57 145 -117 278 121 69 0 chr2 115491868 115491926 -135195928 + L1MB4 LINE L1 3501 3562 -2584 6119 199 53 50 chr2 115491956 115492332 -135195522 + L1MB4 LINE L1 3543 3916 -2264 2339 87 0 0 chr2 115492332 115492630 -135195224 + AluSq SINE Alu 1 298 -15 6119 199 53 50 chr2 115492630 115492913 -135194941 + L1MB4 LINE L1 3916 4197 -1983 1657 168 6 44 chr2 115492913 115493234 -135194620 - AluJb SINE Alu -3 309 1 6119 199 53 50 chr2 115493234 115493508 -135194346 + L1MB4 LINE L1 4197 4469 -1711 2001 138 10 10 chr2 115493508 115493643 -135194211 + AluSx SINE Alu 1 135 -177 2328 79 7 0 chr2 115493643 115493946 -135193908 + AluY SINE Alu 1 305 -6 2001 138 10 10 chr2 115493946 115494115 -135193739 + AluSx SINE Alu 134 305 -7 6119 199 53 50 chr2 115494115 115494458 -135193396 + L1MB4 LINE L1 4469 4810 -1370 2352 84 0 3 chr2 115494458 115494756 -135193098 - AluY SINE Alu -14 297 1 6119 199 53 50 chr2 115494756 115494811 -135193043 + L1MB4 LINE L1 4810 4863 -1317 2268 97 3 0 chr2 115494811 115495110 -135192744 - AluSx SINE Alu -12 300 1 6119 199 53 50 chr2 115495110 115495408 -135192446 + L1MB4 LINE L1 4863 5159 -1021 1601 155 81 7 chr2 115495408 115495679 -135192175 + AluJo SINE Alu 1 291 -21 6119 199 53 50 chr2 115495679 115496670 -135191184 + L1MB4 LINE L1 5159 6177 -3 2339 86 0 13 chr2 115496723 115497036 -135190818 + AluSc SINE Alu 1 309 0 586 183 83 0 chr2 115597101 115597221 -135090633 - MSTB LTR MaLR -296 130 1 282 218 51 0 chr2 115597221 115597298 -135090556 + Charlie2a DNA MER1_type 574 654 -2208 460 190 10 0 chr2 115597566 115597666 -135090188 + Charlie2a DNA MER1_type 976 1076 -1786 676 203 114 91 chr2 115597676 115598061 -135089793 + Charlie2a DNA MER1_type 1403 1796 -1066 275 301 64 35 chr2 115598394 115598567 -135089287 - L2 LINE L2 -2 3311 3134 205 229 29 29 chr2 115599069 115599174 -135088680 + A-rich Low_complexity Low_complexity 2 106 0 434 61 15 0 chr2 115599333 115599399 -135088455 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 425 70 0 0 chr2 115599426 115599483 -135088371 + U2 snRNA snRNA 1 57 -131 228 67 0 0 chr2 115599483 115599513 -135088341 + (CCTA)n Simple_repeat Simple_repeat 1 30 0 2264 73 13 32 chr2 115601729 115602042 -135085812 + AluY SINE Alu 1 307 -4 2332 105 0 0 chr2 115602862 115603166 -135084688 + AluSc SINE Alu 1 304 -5 774 124 0 0 chr2 115603202 115603323 -135084531 + (TCC)n Simple_repeat Simple_repeat 3 123 0 213 250 59 0 chr2 115603738 115603806 -135084048 + (TATATG)n Simple_repeat Simple_repeat 4 75 0 1446 93 0 0 chr2 115604791 115604984 -135082870 + AluY SINE Alu 119 311 0 1302 223 68 47 chr2 115605856 115606238 -135081616 - MLT1B LTR MaLR 0 390 1 24 0 0 0 chr2 115606606 115606630 -135081224 + AT_rich Low_complexity Low_complexity 1 24 0 328 336 26 26 chr2 115606898 115607014 -135080840 + MIR SINE MIR 33 148 -114 182 328 133 16 chr2 115610014 115610142 -135077712 + MIR3 SINE MIR 16 158 -50 3630 208 97 29 chr2 115610230 115611246 -135076608 - Charlie1 DNA MER1_type -1 2760 1676 3202 247 87 82 chr2 115611280 115612962 -135074892 - HAL1 LINE L1 -805 1702 12 288 386 50 0 chr2 115613682 115613783 -135074071 + L2 LINE L2 3142 3247 -25 309 354 43 6 chr2 115614319 115614480 -135073374 + L2 LINE L2 1760 1926 -1388 205 225 163 50 chr2 115616838 115616918 -135070936 + MIR SINE MIR 4 92 -170 763 244 36 107 chr2 115617274 115617613 -135070241 + MLT1I LTR MaLR 45 356 -53 1880 167 3 3 chr2 115617613 115617919 -135069935 - AluSx SINE Alu -6 306 1 763 244 36 107 chr2 115617919 115617964 -135069890 + MLT1I LTR MaLR 356 403 -6 521 263 20 32 chr2 115619760 115620007 -135067847 - L1M4 LINE L1 -2980 3166 2923 22 35 0 0 chr2 115620772 115620801 -135067053 + AT_rich Low_complexity Low_complexity 1 29 0 363 127 0 0 chr2 115621623 115621686 -135066168 + (CAG)n Simple_repeat Simple_repeat 2 64 0 423 0 0 0 chr2 115624529 115624576 -135063278 + (TG)n Simple_repeat Simple_repeat 2 48 0 23 0 0 0 chr2 115626024 115626047 -135061807 + AT_rich Low_complexity Low_complexity 1 23 0 1865 77 0 0 chr2 115626056 115626289 -135061565 - AluSc SINE Alu -76 233 1 23 0 0 0 chr2 115626396 115626419 -135061435 + AT_rich Low_complexity Low_complexity 1 23 0 902 191 87 0 chr2 115627466 115627639 -135060215 + MER5A DNA MER1_type 2 189 0 292 309 0 11 chr2 115629414 115629508 -135058346 + L2 LINE L2 3220 3312 -1 257 313 15 0 chr2 115631462 115631529 -135056325 - MIR3 SINE MIR -38 170 103 370 265 40 80 chr2 115631629 115631829 -135056025 - MLT1L LTR MaLR -2 613 422 182 377 113 19 chr2 115632847 115632953 -135054901 - L2 LINE L2 -5 3267 3152 237 317 195 8 chr2 115633358 115633481 -135054373 - MIR SINE MIR -109 153 8 318 376 40 0 chr2 115633849 115633974 -135053880 + L2 LINE L2 3143 3272 0 279 0 0 0 chr2 115634152 115634183 -135053671 + (TG)n Simple_repeat Simple_repeat 2 32 0 2098 125 0 0 chr2 115634258 115634555 -135053299 + AluSx SINE Alu 1 297 -15 849 162 95 6 chr2 115636224 115636403 -135051451 - MER20 DNA MER1_type -2 217 23 503 337 50 5 chr2 115637531 115637733 -135050121 + MIR SINE MIR 2 212 -50 495 0 0 0 chr2 115639165 115639220 -135048634 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 2890 211 48 16 chr2 115641171 115643595 -135044259 - L1MC3 LINE L1 -23 7762 5154 1039 153 0 0 chr2 115643710 115643867 -135043987 + AluSg/x SINE Alu 133 289 -23 25 0 0 0 chr2 115643867 115643892 -135043962 + AT_rich Low_complexity Low_complexity 1 25 0 561 343 74 5 chr2 115644082 115644298 -135043556 + MIR SINE MIR 25 255 -7 1844 169 26 0 chr2 115644698 115645048 -135042806 - L1MA5 LINE L1 -2 6298 5940 267 258 0 21 chr2 115645049 115645142 -135042712 + L1M4 LINE L1 4531 4621 -1525 298 239 22 11 chr2 115645287 115645379 -135042475 + (TATATG)n Simple_repeat Simple_repeat 3 95 0 746 236 35 81 chr2 115645425 115645684 -135042170 + MIR SINE MIR 5 251 -11 1601 166 37 14 chr2 115645757 115646053 -135041801 + AluSx SINE Alu 1 303 -9 329 292 71 30 chr2 115646230 115646485 -135041369 - MER102a DNA MER1_type -1 329 46 1328 186 44 11 chr2 115646713 115646829 -135041025 + AluJo SINE Alu 1 112 -199 213 65 0 0 chr2 115646829 115646860 -135040994 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1328 186 44 11 chr2 115646860 115647045 -135040809 + AluJo SINE Alu 112 311 0 276 292 185 0 chr2 115647081 115647211 -135040643 - MIR SINE MIR -34 228 75 216 0 0 0 chr2 115647393 115647417 -135040437 + (A)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr2 115648418 115648441 -135039413 + AT_rich Low_complexity Low_complexity 1 23 0 1992 133 10 0 chr2 115648444 115648737 -135039117 + AluSx SINE Alu 1 296 -16 367 261 67 15 chr2 115650950 115651154 -135036700 - MER67D LTR ERV1 0 543 285 * 1158 223 41 17 chr2 115651135 115651517 -135036337 - MER67B LTR ERV1 -243 418 121 244 301 62 10 chr2 115652583 115652792 -135035062 + L1ME LINE L1 5676 5895 -226 257 156 0 31 chr2 115652831 115652895 -135034959 + (CATA)n Simple_repeat Simple_repeat 2 63 0 2049 123 7 7 chr2 115652942 115653250 -135034604 - AluSg SINE Alu -2 308 1 402 269 88 38 chr2 115654512 115654672 -135033182 + MER5A DNA MER1_type 21 188 -1 1118 219 69 33 chr2 115655719 115655959 -135031895 - L1ME3A LINE L1 0 6170 5909 1981 139 7 3 chr2 115655959 115656254 -135031600 - AluSx SINE Alu -16 296 1 1118 219 69 33 chr2 115656254 115656406 -135031448 - L1ME3A LINE L1 -261 5909 5764 242 318 0 0 chr2 115656454 115656542 -135031312 - L1MC4 LINE L1 -1342 6700 6613 1040 96 10 2 chr2 115656542 115656693 -135031161 + AluSx SINE Alu 58 194 -118 236 253 0 22 chr2 115656711 115656802 -135031052 - L1MC4 LINE L1 -1339 6703 6615 343 273 23 0 chr2 115656825 115656913 -135030941 + L1MC4 LINE L1 6614 6703 -1339 441 198 0 0 chr2 115656916 115657007 -135030847 + (TA)n Simple_repeat Simple_repeat 2 92 0 1711 274 58 39 chr2 115657066 115657942 -135029912 + L1M4 LINE L1 3622 4514 -1632 346 256 67 0 chr2 115657954 115658044 -135029810 + L1M4 LINE L1 4419 4514 -1632 935 254 117 5 chr2 115658056 115658501 -135029353 + L1M4 LINE L1 4419 4913 -1233 772 144 43 5 chr2 115658507 115658695 -135029159 + L1P LINE L1 4788 4982 -1164 973 201 42 9 chr2 115659395 115659609 -135028245 - MIR SINE MIR -26 236 16 290 350 17 17 chr2 115659644 115659764 -135028090 + L2 LINE L2 2911 3030 -242 418 343 93 5 chr2 115661166 115661370 -135026484 + MIR SINE MIR 1 222 -40 2074 129 0 13 chr2 115661620 115661931 -135025923 - AluSq SINE Alu -2 311 5 335 270 157 29 chr2 115662926 115663130 -135024724 - L2 LINE L2 -4 3309 3080 275 300 57 36 chr2 115663418 115663558 -135024296 + MIR3 SINE MIR 33 175 -33 570 330 52 8 chr2 115664367 115664634 -135023220 - L2 LINE L2 -15 3298 3020 386 300 36 7 chr2 115664634 115664774 -135023080 - L2 LINE L2 -1 3312 3169 1078 284 115 83 chr2 115664992 115665315 -135022539 - L2 LINE L2 -427 2887 2576 330 26 0 0 chr2 115665315 115665354 -135022500 + (TA)n Simple_repeat Simple_repeat 1 39 0 1078 284 115 83 chr2 115665354 115666167 -135021687 - L2 LINE L2 -738 2576 1714 645 339 160 15 chr2 115667378 115667779 -135020075 + L2 LINE L2 2850 3308 -5 226 303 30 0 chr2 115667910 115667976 -135019878 + L2 LINE L2 3246 3313 0 2224 203 72 6 chr2 115668181 115668655 -135019199 + MLT1D LTR MaLR 1 505 0 243 217 0 0 chr2 115668961 115669021 -135018833 + A-rich Low_complexity Low_complexity 1 60 0 26 0 0 0 chr2 115669398 115669424 -135018430 + AT_rich Low_complexity Low_complexity 1 26 0 316 217 31 8 chr2 115670457 115670586 -135017268 + (CA)n Simple_repeat Simple_repeat 1 132 0 2288 108 0 0 chr2 115672175 115672470 -135015384 + AluSc SINE Alu 1 295 -14 235 287 17 43 chr2 115673742 115673857 -135013997 + GA-rich Low_complexity Low_complexity 3 114 0 21 0 0 0 chr2 115674020 115674041 -135013813 + AT_rich Low_complexity Low_complexity 1 21 0 200 382 0 0 chr2 115674359 115674414 -135013440 + L2 LINE L2 3210 3264 -8 255 288 36 54 chr2 115674782 115674893 -135012961 + MIR SINE MIR 39 147 -115 238 244 0 0 chr2 115674889 115674934 -135012920 - L2 LINE L2 -17 3255 3211 * 261 0 0 0 chr2 115674960 115674989 -135012865 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 352 286 93 77 chr2 115674996 115675178 -135012676 - L2 LINE L2 -21 3292 3108 190 296 42 0 chr2 115675276 115675347 -135012507 - L2 LINE L2 -316 2997 2924 492 250 28 0 chr2 115675444 115675588 -135012266 - L1MD3 LINE L1 -5 7990 7843 300 206 0 0 chr2 115675606 115675669 -135012185 - L1MD3 LINE L1 -203 7792 7730 447 293 58 35 chr2 115675808 115675982 -135011872 + MIR3 SINE MIR 16 193 -15 201 212 167 0 chr2 115676220 115676286 -135011568 - MIR SINE MIR -38 224 148 1233 157 83 113 chr2 115676301 115676664 -135011190 + MLT1D LTR MaLR 3 354 -151 2016 107 16 7 chr2 115676806 115677115 -135010739 + L1PA10 LINE L1 5854 6165 -3 181 406 0 0 chr2 115677152 115677216 -135010638 - MIR SINE MIR -165 97 34 900 177 49 5 chr2 115677247 115677450 -135010404 - L1MA4A LINE L1 0 6303 6092 333 47 0 0 chr2 115677451 115677494 -135010360 + L1MA4 LINE L1 5848 5890 -410 291 221 44 9 chr2 115678927 115679040 -135008814 + (TCTA)n Simple_repeat Simple_repeat 3 119 0 198 260 0 20 chr2 115679345 115679395 -135008459 + MIR3 SINE MIR 13 61 -147 320 242 86 108 chr2 115679558 115679628 -135008226 + L3 LINE CR1 1120 1190 -387 2471 66 0 25 chr2 115679628 115679945 -135007909 + AluY SINE Alu 1 309 -2 320 242 86 108 chr2 115679945 115680060 -135007794 + L3 LINE CR1 1190 1301 -276 2437 132 41 19 chr2 115680186 115680604 -135007250 + MSTA LTR MaLR 1 427 -1 393 322 25 55 chr2 115680636 115680835 -135007019 + L3 LINE CR1 1292 1484 -93 22 35 0 0 chr2 115680856 115680885 -135006969 + AT_rich Low_complexity Low_complexity 1 29 0 270 131 62 40 chr2 115680899 115681075 -135006779 + (TA)n Simple_repeat Simple_repeat 1 180 0 330 283 139 17 chr2 115681778 115681951 -135005903 - MIR SINE MIR -6 256 63 1498 229 3 7 chr2 115682064 115682366 -135005488 - AluJo SINE Alu -9 303 3 590 282 84 102 chr2 115685228 115685728 -135002126 - LTR33 LTR ERVL -8 513 23 195 42 0 0 chr2 115685728 115685752 -135002102 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 416 254 203 0 chr2 115686276 115686394 -135001460 - MIR SINE MIR -62 200 59 180 0 0 0 chr2 115686406 115686426 -135001428 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2215 183 71 7 chr2 115686701 115687138 -135000716 - MLT1C LTR MaLR 0 467 3 192 295 0 64 chr2 115688129 115688207 -134999647 - L2 LINE L2 -1 3312 3240 240 368 44 59 chr2 115689686 115689890 -134997964 + L2 LINE L2 2606 2806 -508 2432 62 10 13 chr2 115690256 115690565 -134997289 - AluY SINE Alu -3 308 1 766 238 45 31 chr2 115690567 115690857 -134996997 + LTR37A LTR ERV1 133 426 0 5311 161 30 6 chr2 115690886 115691895 -134995959 - L1MC1 LINE L1 -18 6315 5283 262 143 20 20 chr2 115691921 115691970 -134995884 - MER5B DNA MER1_type -8 170 122 429 223 117 0 chr2 115692013 115692116 -134995738 - MER5A DNA MER1_type -31 158 44 202 224 118 40 chr2 115692059 115692135 -134995719 + MER5A DNA MER1_type 103 184 -5 * 213 39 0 0 chr2 115693461 115693487 -134994367 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2094 47 0 0 chr2 115693487 115693745 -134994109 - L1PA4 LINE L1 -10 6145 5888 1924 228 90 31 chr2 115694084 115694672 -134993182 - MLT1E3 LTR MaLR 0 624 2 1757 172 3 14 chr2 115695048 115695338 -134992516 + AluJb SINE Alu 1 287 -25 417 265 132 21 chr2 115695460 115695649 -134992205 + MIR SINE MIR 40 249 -13 2142 149 32 61 chr2 115695699 115696098 -134991756 + MSTB1 LTR MaLR 1 410 -22 2414 72 7 16 chr2 115696098 115696404 -134991450 + AluSp SINE Alu 1 303 -10 237 108 0 0 chr2 115696405 115696442 -134991412 + (CA)n Simple_repeat Simple_repeat 2 38 0 2142 149 32 61 chr2 115696442 115696482 -134991372 + MSTB1 LTR MaLR 409 429 -3 246 288 62 58 chr2 115697273 115697516 -134990338 + L1MD1 LINE L1 5648 5891 -230 1277 115 53 0 chr2 115697519 115697728 -134990126 + L1MA5A LINE L1 6074 6293 -4 3496 224 19 15 chr2 115699114 115700039 -134987815 + MER63C DNA MER1_type 2 930 0 7385 32 10 1 chr2 115700913 115702249 -134985605 + L1PA4 LINE L1 4800 6155 0 1176 249 122 3 chr2 115702274 115703083 -134984771 + L1MB5 LINE L1 4906 5903 -271 739 164 67 46 chr2 115703083 115703278 -134984576 - THE1C LTR MaLR 0 375 177 291 110 49 24 chr2 115703287 115703369 -134984485 + GA-rich Low_complexity Low_complexity 1 84 0 674 167 180 16 chr2 115703372 115703555 -134984299 - THE1C LTR MaLR -147 208 1 478 189 63 8 chr2 115703555 115703682 -134984172 + L1MD1 LINE L1 5899 6032 -210 276 197 61 0 chr2 115703812 115703878 -134983976 - MLT1H LTR MaLR -1 548 479 311 239 90 95 chr2 115705171 115705393 -134982461 + MER102b DNA MER1_type 120 340 -1 292 326 0 0 chr2 115705992 115706084 -134981770 + MER5A DNA MER1_type 19 110 -79 877 173 166 95 chr2 115706564 115707027 -134980827 - LTR54B LTR ERV1 -2 496 1 225 217 14 29 chr2 115707060 115707129 -134980725 + CT-rich Low_complexity Low_complexity 3 70 0 28 0 0 0 chr2 115707783 115707811 -134980043 + AT_rich Low_complexity Low_complexity 1 28 0 554 304 76 13 chr2 115709595 115709819 -134978035 + MIR SINE MIR 7 244 -18 289 261 70 56 chr2 115709882 115710024 -134977830 + MER103 DNA DNA 8 151 -15 405 272 200 0 chr2 115711200 115711380 -134976474 + MIR SINE MIR 47 262 0 209 268 0 28 chr2 115712095 115712166 -134975688 + MIR SINE MIR 77 145 -117 30 27 0 0 chr2 115713535 115713572 -134974282 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr2 115713995 115714019 -134973835 + AT_rich Low_complexity Low_complexity 1 24 0 420 299 49 21 chr2 115714225 115714369 -134973485 - L2 LINE L2 -5 3308 3161 276 263 91 40 chr2 115714538 115714637 -134973217 + MIR SINE MIR 2 105 -157 278 239 239 26 chr2 115715210 115715323 -134972531 + MIR3 SINE MIR 2 138 -70 180 0 0 0 chr2 115715478 115715498 -134972356 + (A)n Simple_repeat Simple_repeat 1 20 0 1084 205 49 5 chr2 115715519 115715743 -134972111 + MIR SINE MIR 11 244 -18 497 276 134 49 chr2 115717371 115717715 -134970139 - LTR50 LTR ERVL 0 795 423 1787 161 28 44 chr2 115717720 115718090 -134969764 - MLT1A1 LTR MaLR -3 454 1 315 227 173 27 chr2 115718167 115718277 -134969577 - LTR50 LTR ERVL -505 290 165 231 225 14 0 chr2 115718368 115718439 -134969415 + L1MC4 LINE L1 6632 6703 -1339 295 173 25 25 chr2 115718439 115718520 -134969334 + (CATATA)n Simple_repeat Simple_repeat 6 86 0 377 257 35 12 chr2 115718536 115718707 -134969147 + (TATATG)n Simple_repeat Simple_repeat 2 176 0 296 100 0 0 chr2 115718707 115718747 -134969107 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 228 304 36 0 chr2 115718748 115718860 -134968994 + L1MC4 LINE L1 6615 6730 -1312 312 331 89 6 chr2 115718991 115719148 -134968706 - MIR SINE MIR -70 192 23 1752 152 32 35 chr2 115719415 115719789 -134968065 - L1MA7 LINE L1 -6 6285 5913 1276 157 15 27 chr2 115719790 115719828 -134968026 + L1MA7 LINE L1 5651 5688 -603 1437 231 46 31 chr2 115719828 115720218 -134967636 - MSTD LTR MaLR 0 396 1 1276 157 15 27 chr2 115720218 115720440 -134967414 + L1MA7 LINE L1 5688 5908 -383 275 340 73 73 chr2 115721327 115721586 -134966268 + L2 LINE L2 2989 3247 -25 216 0 0 0 chr2 115722040 115722064 -134965790 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 471 328 69 28 chr2 115722472 115722719 -134965135 + MIR SINE MIR 3 259 -3 29 0 0 0 chr2 115722782 115722811 -134965043 + AT_rich Low_complexity Low_complexity 1 29 0 2155 103 3 63 chr2 115723309 115723628 -134964226 - AluSg SINE Alu -10 300 1 213 219 0 0 chr2 115724348 115724389 -134963465 + (TG)n Simple_repeat Simple_repeat 1 41 0 1404 218 20 126 chr2 115726081 115726147 -134961707 - MER34 LTR ERV1 -9 533 462 2377 104 0 0 chr2 115726147 115726455 -134961399 + AluSg SINE Alu 1 308 -2 1404 218 20 126 chr2 115726455 115726984 -134960870 - MER34 LTR ERV1 -80 462 1 324 314 85 0 chr2 115726984 115727137 -134960717 - MIR SINE MIR -89 173 8 896 194 74 105 chr2 115727394 115728090 -134959764 + LTR1 LTR ERV1 1 745 -81 1972 169 0 3 chr2 115728411 115728724 -134959130 - AluJb SINE Alu 0 312 1 676 304 37 12 chr2 115729027 115729270 -134958584 + MIR SINE MIR 12 260 -2 350 241 9 0 chr2 115729356 115729464 -134958390 + CT-rich Low_complexity Low_complexity 3 111 0 1661 266 29 2 chr2 115729465 115729949 -134957905 - L1ME1 LINE L1 -2 6164 5668 333 109 0 0 chr2 115730368 115730423 -134957431 + (GA)n Simple_repeat Simple_repeat 1 55 0 185 373 124 0 chr2 115731545 115731698 -134956156 + MIR SINE MIR 23 194 -68 2256 112 3 0 chr2 115731700 115732004 -134955850 + AluSg SINE Alu 3 307 -3 229 232 58 14 chr2 115732017 115732086 -134955768 + MIR SINE MIR 185 256 -6 245 260 0 0 chr2 115732485 115732558 -134955296 + (TA)n Simple_repeat Simple_repeat 2 74 0 180 216 0 27 chr2 115733879 115733916 -134953938 + MIR SINE MIR 117 152 -56 186 276 0 0 chr2 115734376 115734434 -134953420 + GA-rich Low_complexity Low_complexity 1 58 0 2447 85 7 0 chr2 115734615 115734922 -134952932 + AluSq SINE Alu 1 309 -4 287 104 21 0 chr2 115734976 115735024 -134952830 + (GAAA)n Simple_repeat Simple_repeat 3 51 0 339 286 19 0 chr2 115735605 115735710 -134952144 - MIR SINE MIR -58 204 98 212 179 0 0 chr2 115736131 115736170 -134951684 + T-rich Low_complexity Low_complexity 1 39 0 189 290 80 60 chr2 115736641 115736741 -134951113 - L3 LINE CR1 -11 1566 1465 185 150 0 25 chr2 115737079 115737119 -134950735 + (TTC)n Simple_repeat Simple_repeat 3 41 0 900 191 56 6 chr2 115737366 115737544 -134950310 - MER5A DNA MER1_type -2 187 1 2302 97 3 7 chr2 115738613 115738913 -134948941 + AluSx SINE Alu 1 299 -13 2112 149 3 0 chr2 115739444 115739752 -134948102 - AluSx SINE Alu -3 309 1 403 252 200 0 chr2 115739987 115740142 -134947712 + MER5A DNA MER1_type 4 189 0 239 240 0 68 chr2 115740179 115740252 -134947602 + MIR SINE MIR 56 122 -95 224 175 0 0 chr2 115741652 115741692 -134946162 + L2 LINE L2 3272 3311 -2 357 62 0 0 chr2 115742615 115742663 -134945191 + (CA)n Simple_repeat Simple_repeat 1 48 0 448 275 96 32 chr2 115742786 115743037 -134944817 + HAL1b LINE L1 21 287 -1061 392 244 144 75 chr2 115743085 115743179 -134944675 + HAL1b LINE L1 397 483 -865 1509 24 0 0 chr2 115743179 115743349 -134944505 - AluY SINE Alu -9 302 133 2701 16 0 16 chr2 115743349 115743658 -134944196 - AluYa5 SINE Alu -7 304 1 392 244 144 75 chr2 115743658 115743922 -134943932 + HAL1b LINE L1 482 781 -567 24 32 0 0 chr2 115743936 115743967 -134943887 + AT_rich Low_complexity Low_complexity 1 31 0 2016 129 53 36 chr2 115744038 115744394 -134943460 - THE1B LTR MaLR 0 364 3 1249 245 65 45 chr2 115744400 115744845 -134943009 - LTR16A1 LTR ERVL 0 457 4 210 359 75 25 chr2 115745530 115745689 -134942165 - L2 LINE L2 -567 2747 2581 * 315 301 182 13 chr2 115745667 115745903 -134941951 - L3 LINE CR1 -11 1566 1291 247 365 48 10 chr2 115745927 115746031 -134941823 - L2 LINE L2 -36 3236 3129 267 317 43 37 chr2 115746212 115746376 -134941478 - L3 LINE CR1 -376 1201 1037 477 294 137 15 chr2 115746810 115747014 -134940840 - MIR SINE MIR -1 261 33 340 329 105 13 chr2 115746995 115747147 -134940707 + MIR3 SINE MIR 40 205 -3 * 1731 181 12 18 chr2 115747904 115748246 -134939608 - MLT1A1 LTR MaLR -16 349 10 2170 152 12 0 chr2 115749021 115749364 -134938490 - MER7A DNA MER2_type -1 345 1 449 323 102 33 chr2 115750694 115750997 -134936857 + L2 LINE L2 2653 2976 -338 2668 75 8 6 chr2 115751059 115751420 -134936434 - L1PA12 LINE L1 -7 6161 5800 22 35 0 0 chr2 115752164 115752193 -134935661 + AT_rich Low_complexity Low_complexity 1 29 0 203 306 0 0 chr2 115752520 115752569 -134935285 - L2 LINE L2 -18 3254 3206 204 91 61 0 chr2 115752777 115752810 -134935044 + GA-rich Low_complexity Low_complexity 1 35 0 324 184 18 9 chr2 115752842 115752956 -134934898 + (TA)n Simple_repeat Simple_repeat 2 116 0 322 63 0 79 chr2 115752983 115753046 -134934808 + MLT2C1 LTR ERVL 349 397 0 2312 205 28 2 chr2 115753183 115753651 -134934203 + MLT2B1 LTR ERVL 1 480 -40 239 211 0 63 chr2 115753655 115753750 -134934104 - L1MC4 LINE L1 -1339 6703 6615 777 234 97 40 chr2 115754652 115754703 -134933151 - HAL1 LINE L1 -719 1788 1741 185 62 0 31 chr2 115754703 115754735 -134933119 + (TTA)n Simple_repeat Simple_repeat 3 33 0 777 234 97 40 chr2 115754735 115754775 -134933079 - HAL1 LINE L1 -766 1741 1705 1760 72 8 0 chr2 115754775 115755012 -134932842 + L1PA10 LINE L1 5930 6168 0 777 234 97 40 chr2 115755012 115755218 -134932636 - HAL1 LINE L1 -802 1705 1473 1523 274 117 72 chr2 115755248 115756553 -134931301 - HAL1 LINE L1 -1139 1368 6 274 339 71 63 chr2 115756906 115757474 -134930380 + L2 LINE L2 2521 3089 -183 2387 100 0 0 chr2 115757768 115758079 -134929775 - AluY SINE Alu 0 311 1 349 322 0 65 chr2 115758993 115759192 -134928662 - MIR SINE MIR -29 233 48 426 273 68 8 chr2 115759719 115759851 -134928003 - MIR3 SINE MIR -15 193 54 273 280 0 20 chr2 115759987 115760087 -134927767 - MLT1I LTR MaLR 0 409 312 245 258 113 57 chr2 115760228 115760352 -134927502 - MLT1J LTR MaLR -272 239 109 229 305 134 0 chr2 115760410 115760492 -134927362 + L2 LINE L2 2620 2712 -602 375 221 51 0 chr2 115760499 115760657 -134927197 + (TA)n Simple_repeat Simple_repeat 1 166 0 192 152 0 0 chr2 115760680 115760713 -134927141 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 316 339 0 9 chr2 115761009 115761124 -134926730 + L2 LINE L2 3199 3312 -1 186 167 93 19 chr2 115761343 115761397 -134926457 + L2 LINE L2 1631 1688 -1626 2214 129 0 0 chr2 115763409 115763720 -134924134 - AluSx SINE Alu -1 311 1 209 303 114 53 chr2 115763943 115764075 -134923779 + MIR SINE MIR 8 147 -115 640 321 28 52 chr2 115765317 115765681 -134922173 - L2 LINE L2 0 3313 2959 26 50 0 0 chr2 115766016 115766056 -134921798 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr2 115766118 115766141 -134921713 + AT_rich Low_complexity Low_complexity 1 23 0 2208 107 0 0 chr2 115766232 115766522 -134921332 - AluSc SINE Alu -19 290 1 32 106 0 0 chr2 115766525 115766648 -134921206 + AT_rich Low_complexity Low_complexity 1 123 0 481 154 29 10 chr2 115766648 115766752 -134921102 + Charlie5 DNA MER1_type 2519 2624 0 23 0 0 0 chr2 115767134 115767157 -134920697 + AT_rich Low_complexity Low_complexity 1 23 0 2331 151 48 10 chr2 115767481 115767893 -134919961 - MSTA LTR MaLR 0 428 1 238 284 90 0 chr2 115768370 115768437 -134919417 + MIR SINE MIR 14 86 -176 650 250 138 17 chr2 115768443 115768675 -134919179 + MER45C DNA AcHobo 6 265 -688 504 201 22 13 chr2 115768741 115768904 -134918950 + MER45C DNA AcHobo 763 952 -1 217 269 30 0 chr2 115768992 115769059 -134918795 + (TATG)n Simple_repeat Simple_repeat 4 72 0 537 316 36 8 chr2 115769225 115769475 -134918379 - LTR33 LTR ERVL -264 257 1 2113 132 0 0 chr2 115770754 115771057 -134916797 + AluSg SINE Alu 3 305 -5 2206 103 20 0 chr2 115771442 115771734 -134916120 - AluSg SINE Alu -12 298 1 25 0 0 0 chr2 115773462 115773487 -134914367 + AT_rich Low_complexity Low_complexity 1 25 0 439 42 0 14 chr2 115773487 115773558 -134914296 - L1MA7 LINE L1 0 6291 6222 2972 62 21 8 chr2 115773870 115774254 -134913600 + MLT2A1 LTR ERVL 1 389 -55 189 107 0 0 chr2 115774254 115774282 -134913572 + (TA)n Simple_repeat Simple_repeat 1 28 0 223 140 40 0 chr2 115774365 115774415 -134913439 + (TA)n Simple_repeat Simple_repeat 1 52 0 325 218 10 69 chr2 115774417 115774518 -134913336 - L1MC4 LINE L1 -1334 6708 6614 458 274 101 21 chr2 115776488 115776725 -134911129 - MIR SINE MIR 0 262 4 348 257 96 37 chr2 115776777 115776913 -134910941 - L2 LINE L2 -8 3305 3162 202 320 86 23 chr2 115777156 115777284 -134910570 - L2 LINE L2 -457 2857 2722 356 370 43 30 chr2 115778328 115778628 -134909226 - L2 LINE L2 -1124 2190 1887 1049 249 51 60 chr2 115779132 115779601 -134908253 - L1ME2 LINE L1 -19 6643 6179 263 277 49 62 chr2 115779608 115779832 -134908022 - L1ME2 LINE L1 -1052 5592 5372 910 272 37 26 chr2 115779859 115780447 -134907407 - L1ME2 LINE L1 -4832 1710 1100 222 128 0 0 chr2 115782204 115782243 -134905611 + (TG)n Simple_repeat Simple_repeat 2 40 0 202 293 80 0 chr2 115783066 115783141 -134904713 - MIR SINE MIR -26 236 156 346 369 86 9 chr2 115783195 115783428 -134904426 + MIR SINE MIR 5 255 -7 2641 189 55 13 chr2 115783722 115784250 -134903604 - MER68 LTR ERV1 -1 561 12 2345 174 16 23 chr2 115785139 115785576 -134902278 + Tigger2a DNA MER2_type 1 434 0 185 189 94 0 chr2 115788383 115788436 -134899418 - MIR SINE MIR -56 206 149 2754 154 35 6 chr2 115788461 115788949 -134898905 + L1PA16 LINE L1 5663 6164 -2 285 304 19 53 chr2 115789443 115789604 -134898250 - MIR SINE MIR -41 167 12 257 239 42 0 chr2 115789968 115790039 -134897815 - MIR SINE MIR -86 176 103 300 285 3 13 chr2 115790140 115790231 -134897623 + MER5B DNA MER1_type 5 105 -84 329 315 7 62 chr2 115790325 115790471 -134897383 + L3 LINE CR1 966 1103 -474 290 232 0 62 chr2 115791275 115791387 -134896467 - L1ME4a LINE L1 -50 6071 5967 193 277 0 0 chr2 115792605 115792652 -134895202 + MIR SINE MIR 47 93 -169 194 342 13 13 chr2 115792950 115793026 -134894828 + L2 LINE L2 3193 3268 -4 244 337 21 0 chr2 115793209 115793304 -134894550 - MIR SINE MIR -62 146 50 5534 61 3 7 chr2 115793310 115794038 -134893816 + L1PA8 LINE L1 5448 6172 0 22 0 0 0 chr2 115794162 115794184 -134893670 + AT_rich Low_complexity Low_complexity 1 22 0 278 350 0 44 chr2 115795486 115795623 -134892231 + MIR3 SINE MIR 26 156 -52 223 316 0 18 chr2 115795716 115795773 -134892081 - L2 LINE L2 -17 3255 3200 299 296 0 62 chr2 115796094 115796270 -134891584 + MLT1H LTR MaLR 59 223 -326 345 289 98 36 chr2 115796568 115797248 -134890606 + L1MC5 LINE L1 7190 7740 -221 21 36 0 0 chr2 115798494 115798522 -134889332 + AT_rich Low_complexity Low_complexity 1 28 0 309 151 0 0 chr2 115799248 115799301 -134888553 + (TG)n Simple_repeat Simple_repeat 2 54 0 188 33 0 33 chr2 115799501 115799531 -134888323 + (TAAAA)n Simple_repeat Simple_repeat 5 33 0 284 350 31 0 chr2 115801329 115801426 -134886428 - MIR SINE MIR -152 110 11 210 361 10 0 chr2 115801651 115801748 -134886106 - L3b LINE CR1 -150 1433 1336 219 286 123 64 chr2 115802056 115802227 -134885627 - MIR SINE MIR -6 256 76 194 108 54 0 chr2 115802258 115802295 -134885559 + (TCCA)n Simple_repeat Simple_repeat 3 41 0 253 408 13 6 chr2 115802572 115802729 -134885125 + MLT1K LTR MaLR 275 432 -156 475 277 43 7 chr2 115803832 115803973 -134883881 + MIR SINE MIR 117 262 0 302 369 50 25 chr2 115803996 115804194 -134883660 - L2 LINE L2 -173 3099 2897 2592 241 94 48 chr2 115804722 115806227 -134881627 - L1MC5 LINE L1 -104 7857 6275 328 271 47 42 chr2 115806751 115806943 -134880911 - L1ME4a LINE L1 -233 5888 5696 26 30 0 0 chr2 115808333 115808366 -134879488 + AT_rich Low_complexity Low_complexity 1 33 0 246 204 0 19 chr2 115808961 115809015 -134878839 - MER5B DNA MER1_type -125 53 1 551 311 100 44 chr2 115809384 115810081 -134877773 + L1ME4a LINE L1 5354 6100 -21 296 254 62 18 chr2 115811796 115811972 -134875882 - L1MC4 LINE L1 -408 7634 7350 1244 276 66 38 chr2 115812123 115812392 -134875462 - L1MC4 LINE L1 -724 7318 7058 2514 75 0 0 chr2 115812392 115812700 -134875154 - AluY SINE Alu -3 308 1 1244 276 66 38 chr2 115812700 115813034 -134874820 - L1MC4 LINE L1 -984 7058 6698 2214 118 3 10 chr2 115813128 115813442 -134874412 - AluSx SINE Alu 0 312 1 1919 155 7 7 chr2 115813493 115813803 -134874051 - AluSx SINE Alu -2 310 1 329 254 76 0 chr2 115814124 115814242 -134873612 - L1MC4a LINE L1 -1632 6176 6050 268 255 104 28 chr2 115814310 115814416 -134873438 - MIR SINE MIR -140 122 9 560 330 47 9 chr2 115814428 115814661 -134873193 + MIR SINE MIR 21 262 0 791 203 45 9 chr2 115815551 115815773 -134872081 - Charlie1a DNA MER1_type 0 1455 1226 * 2746 231 77 12 chr2 115815757 115816501 -134871353 - Charlie1a DNA MER1_type -663 792 1 22 0 0 0 chr2 115817095 115817117 -134870737 + AT_rich Low_complexity Low_complexity 1 22 0 3984 209 11 2 chr2 115817351 115818209 -134869645 - L1PA16 LINE L1 -971 5175 4311 * 5054 142 30 22 chr2 115818200 115818958 -134868896 + L1PA16 LINE L1 5164 5931 -235 2626 111 8 0 chr2 115818958 115819319 -134868535 - THE1B LTR MaLR 0 364 1 5054 142 30 22 chr2 115819319 115819548 -134868306 + L1PA16 LINE L1 5931 6157 -9 390 322 59 7 chr2 115820930 115821082 -134866772 - MIR SINE MIR -31 231 72 293 311 81 12 chr2 115822136 115822297 -134865557 - MIR SINE MIR -71 191 20 183 225 0 0 chr2 115822705 115822745 -134865109 - MIR SINE MIR -137 71 32 378 129 0 0 chr2 115823748 115823810 -134864044 + (TG)n Simple_repeat Simple_repeat 2 63 0 2245 92 0 29 chr2 115823825 115824131 -134863723 - AluSg SINE Alu -13 297 1 357 43 0 0 chr2 115824222 115824269 -134863585 + (TG)n Simple_repeat Simple_repeat 2 48 0 284 231 26 13 chr2 115824451 115824529 -134863325 + MER5B DNA MER1_type 89 167 -11 2128 94 4 0 chr2 115825782 115826088 -134861766 + AluSg SINE Alu 13 319 0 261 331 120 23 chr2 115826807 115826940 -134860914 - MIR3 SINE MIR -59 149 4 1264 203 22 89 chr2 115827844 115828258 -134859596 + LTR40b LTR ERVL 77 462 0 517 292 6 39 chr2 115829124 115829235 -134858619 - MER5B DNA MER1_type -5 173 69 2277 50 0 14 chr2 115829235 115829514 -134858340 - AluY SINE Alu -9 302 28 517 292 6 39 chr2 115829514 115829580 -134858274 - MER5B DNA MER1_type -109 69 2 293 287 10 10 chr2 115829752 115829853 -134858001 - L1M4 LINE L1 -1303 4843 4743 214 322 81 0 chr2 115830585 115830672 -134857182 - L3b LINE CR1 -15 1568 1475 229 310 35 69 chr2 115830672 115830846 -134857008 + L2 LINE L2 2843 3010 -262 537 249 31 57 chr2 115831280 115831473 -134856381 - MER5A DNA MER1_type 0 189 2 244 292 26 138 chr2 115831486 115831681 -134856173 + MER5B DNA MER1_type 6 178 0 224 244 141 13 chr2 115831833 115831911 -134855943 - MER5A DNA MER1_type -92 97 10 306 50 0 0 chr2 115832877 115832917 -134854937 + (GA)n Simple_repeat Simple_repeat 2 41 0 288 0 0 0 chr2 115832916 115832948 -134854906 + (TG)n Simple_repeat Simple_repeat 2 33 0 * 956 219 136 61 chr2 115832957 115833394 -134854460 + MLT1C LTR MaLR 1 467 0 292 268 18 18 chr2 115834495 115834607 -134853247 + Charlie8 DNA MER1_type 97 208 -2209 461 313 48 6 chr2 115834904 115835070 -134852784 + MIR SINE MIR 90 262 0 187 403 32 48 chr2 115837247 115837371 -134850483 - L2 LINE L2 0 3272 3151 1840 143 31 55 chr2 115838272 115838656 -134849198 + THE1C LTR MaLR 1 375 0 1731 204 47 31 chr2 115839079 115839532 -134848322 + MLT1C LTR MaLR 6 626 0 204 250 0 59 chr2 115840067 115840135 -134847719 + L3 LINE CR1 1509 1572 -5 21 36 0 0 chr2 115840263 115840291 -134847563 + AT_rich Low_complexity Low_complexity 1 28 0 485 73 0 0 chr2 115841387 115841455 -134846399 + AluSp/q SINE Alu 230 297 -16 245 130 0 37 chr2 115842663 115842717 -134845137 + LTR66 LTR ERVL 388 439 -171 201 147 0 0 chr2 115842718 115842752 -134845102 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 497 146 0 10 chr2 115843010 115843106 -134844748 + (TA)n Simple_repeat Simple_repeat 2 96 0 207 0 0 0 chr2 115843106 115843129 -134844725 + (GA)n Simple_repeat Simple_repeat 2 24 0 652 278 83 9 chr2 115843148 115843364 -134844490 + MIR SINE MIR 31 262 0 2428 87 7 0 chr2 115843778 115844088 -134843766 + AluSx SINE Alu 1 312 0 232 305 73 12 chr2 115845580 115845662 -134842192 + L2 LINE L2 3186 3272 0 224 349 24 54 chr2 115846071 115846237 -134841617 - MIR3 SINE MIR -4 204 44 446 269 75 24 chr2 115846382 115846594 -134841260 - MER58A DNA MER1_type -1 223 1 258 287 11 46 chr2 115846595 115846682 -134841172 - L2 LINE L2 -1 3312 3229 2179 199 52 58 chr2 115847495 115848012 -134839842 - MLT2B2 LTR ERVL -1 514 1 4527 20 0 20 chr2 115849324 115849869 -134837985 + L1PA3 LINE L1 5363 5896 -259 1609 98 5 88 chr2 115849986 115850363 -134837491 + L1PA3 LINE L1 5810 6155 0 628 214 0 0 chr2 115850886 115851003 -134836851 + Tigger3(Golem) DNA MER2_type 2912 3028 -1 574 156 11 0 chr2 115851018 115851108 -134836746 + MSTB LTR MaLR 2 92 -334 988 70 0 0 chr2 115851120 115851249 -134836605 + MSTB1 LTR MaLR 300 428 -4 462 173 12 12 chr2 115851253 115851334 -134836520 + Tigger7 DNA MER2_type 2406 2486 -1 22 0 0 0 chr2 115851494 115851516 -134836338 + AT_rich Low_complexity Low_complexity 1 22 0 239 286 22 66 chr2 115851778 115851869 -134835985 + MER5B DNA MER1_type 4 90 -88 1887 131 0 37 chr2 115853102 115853399 -134834455 - AluSx SINE Alu 0 312 27 274 247 133 48 chr2 115853722 115854114 -134833740 - L1ME4a LINE L1 -5 6116 5692 611 235 45 8 chr2 115855285 115855417 -134832437 + MER5B DNA MER1_type 1 137 -41 2211 106 10 0 chr2 115855477 115855769 -134832085 - AluSx SINE Alu -17 295 1 223 363 18 35 chr2 115855769 115855882 -134831972 - MER5A DNA MER1_type -71 118 8 389 319 153 0 chr2 115856235 115856392 -134831462 - MER5A DNA MER1_type 0 189 9 198 191 0 0 chr2 115856413 115856460 -134831394 + (TA)n Simple_repeat Simple_repeat 1 47 0 299 360 27 9 chr2 115856651 115856762 -134831092 - MIR SINE MIR -149 113 1 522 290 57 31 chr2 115857135 115857328 -134830526 - MIR SINE MIR 0 262 65 260 311 76 0 chr2 115858265 115858384 -134829470 + L2 LINE L2 3184 3311 -2 180 0 0 0 chr2 115861816 115861836 -134826018 + (TCTCTG)n Simple_repeat Simple_repeat 2 21 0 243 24 71 48 chr2 115861908 115861950 -134825904 + L1M1 LINE L1 5846 5888 -414 195 222 0 0 chr2 115862025 115862061 -134825793 + L3 LINE CR1 1537 1572 -5 252 0 0 0 chr2 115862239 115862267 -134825587 + (TTA)n Simple_repeat Simple_repeat 1 28 0 588 29 0 0 chr2 115862414 115862484 -134825370 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 298 306 22 56 chr2 115862703 115862883 -134824971 - MIR SINE MIR -1 261 88 391 296 0 0 chr2 115862929 115863017 -134824837 - L2 LINE L2 -1 3312 3225 527 208 11 22 chr2 115863106 115863284 -134824570 + CT-rich Low_complexity Low_complexity 3 178 0 387 357 105 35 chr2 115865136 115865593 -134822261 + L2 LINE L2 2224 2712 -602 399 281 76 52 chr2 115865795 115865997 -134821857 + MIR SINE MIR 3 207 -55 282 75 30 90 chr2 115867912 115867979 -134819875 + L1PA16 LINE L1 6098 6160 -6 255 114 0 0 chr2 115868584 115868628 -134819226 + (TG)n Simple_repeat Simple_repeat 2 45 0 20904 148 9 7 chr2 115868734 115873544 -134814310 - L1PA11 LINE L1 0 6356 1127 561 290 43 5 chr2 115873772 115873958 -134813896 + MIR SINE MIR 68 260 -2 238 345 118 64 chr2 115874225 115874966 -134812888 - L2 LINE L2 0 3272 2463 2260 113 0 3 chr2 115877137 115877437 -134810417 + AluSg SINE Alu 1 299 -11 1000 232 183 9 chr2 115877876 115878204 -134809650 + MLT1F1 LTR MaLR 183 567 0 258 299 26 0 chr2 115878901 115878978 -134808876 + (TATG)n Simple_repeat Simple_repeat 4 82 0 183 80 0 0 chr2 115880678 115880703 -134807151 + (TTA)n Simple_repeat Simple_repeat 2 26 0 654 302 14 31 chr2 115880859 115881081 -134806773 - MIR SINE MIR -8 254 37 363 315 68 54 chr2 115881122 115881344 -134806510 - MIR SINE MIR -22 240 16 218 416 49 16 chr2 115881712 115881897 -134805957 + L2 LINE L2 3078 3268 -4 1652 199 45 11 chr2 115884538 115884914 -134802940 + MLT1B LTR MaLR 2 390 0 268 222 28 0 chr2 115885186 115885258 -134802596 + (TA)n Simple_repeat Simple_repeat 2 75 0 1308 226 30 36 chr2 115886102 115886525 -134801329 - MLT1C LTR MaLR -17 450 25 1098 280 65 24 chr2 115886680 115887276 -134800578 + Charlie7 DNA MER1_type 69 689 -1923 1287 245 43 11 chr2 115887902 115888278 -134799576 - MER70A LTR ERVL -84 388 1 2040 145 3 3 chr2 115888537 115888847 -134799007 - AluSx SINE Alu -2 310 1 486 201 108 89 chr2 115888847 115889061 -134798793 + LTR33A LTR ERVL 20 237 -286 494 262 77 0 chr2 115889099 115889282 -134798572 + LTR33A LTR ERVL 320 516 -7 810 267 9 18 chr2 115889909 115890130 -134797724 + MER58A DNA MER1_type 6 224 0 246 234 21 0 chr2 115890189 115890236 -134797618 - L2 LINE L2 -15 3257 3210 2131 135 0 0 chr2 115890254 115890551 -134797303 + AluSx SINE Alu 1 297 -15 276 333 30 0 chr2 115890950 115891049 -134796805 - L2 LINE L2 -24 3289 3188 683 244 43 48 chr2 115891183 115891413 -134796441 + MIR SINE MIR 13 241 -21 181 213 85 0 chr2 115891388 115891435 -134796419 + L2 LINE L2 3221 3271 -1 * 284 278 75 108 chr2 115891773 115891829 -134796025 - MIR SINE MIR -10 252 196 2249 116 0 0 chr2 115891829 115892132 -134795722 + AluSx SINE Alu 1 303 -9 284 278 75 108 chr2 115892132 115892316 -134795538 - MIR SINE MIR -66 196 20 26 50 0 0 chr2 115892543 115892583 -134795271 + AT_rich Low_complexity Low_complexity 1 40 0 435 311 115 25 chr2 115892667 115892781 -134795073 - L1ME4a LINE L1 -295 5826 5724 2199 104 20 3 chr2 115892781 115893079 -134794775 - AluSq SINE Alu -10 303 1 435 311 115 25 chr2 115893079 115893208 -134794646 - L1ME4a LINE L1 -397 5724 5561 2108 107 27 0 chr2 115893500 115893799 -134794055 + AluSx SINE Alu 1 307 -5 24 32 0 0 chr2 115893799 115893830 -134794024 + AT_rich Low_complexity Low_complexity 1 31 0 399 152 0 0 chr2 115893857 115893936 -134793918 + (TG)n Simple_repeat Simple_repeat 2 80 0 21 57 0 0 chr2 115895978 115896013 -134791841 + AT_rich Low_complexity Low_complexity 1 35 0 421 309 55 44 chr2 115897012 115897284 -134790570 + HsTC2 DNA Tc2 500 774 -1124 285 152 61 0 chr2 115898019 115898085 -134789769 - MER3 DNA MER1_type -8 201 132 949 87 0 0 chr2 115898090 115898217 -134789637 + AluSg/x SINE Alu 181 307 -5 504 215 47 0 chr2 115898217 115898324 -134789530 - MER3 DNA MER1_type -81 128 17 360 305 15 15 chr2 115898553 115898684 -134789170 - MIR3 SINE MIR -9 199 69 1520 237 94 28 chr2 115899420 115899846 -134788008 - LTR48B LTR ERV1 0 644 173 207 0 0 0 chr2 115899846 115899869 -134787985 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1520 237 94 28 chr2 115899869 115899983 -134787871 - LTR48B LTR ERV1 -471 173 68 226 279 112 50 chr2 115900471 115900632 -134787222 + MLT1I LTR MaLR 1 171 -238 189 306 74 46 chr2 115900902 115901010 -134786844 + MIR3 SINE MIR 98 208 0 584 330 41 9 chr2 115901628 115901849 -134786005 + MIR SINE MIR 32 259 -3 2492 69 0 0 chr2 115902286 115902592 -134785262 + AluY SINE Alu 1 306 -5 1106 192 43 98 chr2 115903884 115904163 -134783691 + LTR56 LTR ERV1 1 214 -223 3819 148 32 17 chr2 115904163 115904824 -134783030 - LTR51 LTR ERV1 0 671 1 1106 192 43 98 chr2 115904824 115905037 -134782817 + LTR56 LTR ERV1 214 437 0 310 263 113 88 chr2 115905401 115905641 -134782213 - MIR SINE MIR -14 248 3 2482 56 0 13 chr2 115905742 115906045 -134781809 + AluY SINE Alu 1 299 -12 353 298 93 39 chr2 115906471 115906750 -134781104 + Tigger8 DNA MER2_type 343 636 -30 346 273 98 15 chr2 115907639 115907771 -134780083 - MIR SINE MIR -9 253 111 243 261 96 70 chr2 115908106 115908221 -134779633 + MIR SINE MIR 6 123 -139 738 294 6 0 chr2 115909326 115909503 -134778351 + MER5A DNA MER1_type 9 186 -3 266 98 20 0 chr2 115910355 115910406 -134777448 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 1875 137 15 0 chr2 115910410 115910681 -134777173 - AluSx SINE Alu -37 275 1 204 40 0 0 chr2 115910685 115910710 -134777144 + (T)n Simple_repeat Simple_repeat 1 25 0 2195 198 46 15 chr2 115911162 115911954 -134775900 + MER54A LTR ERVL 1 901 0 186 296 139 17 chr2 115912008 115912180 -134775674 - L2 LINE L2 -92 3221 3029 549 268 68 34 chr2 115912536 115912787 -134775067 - MIR SINE MIR 0 262 3 5451 81 13 9 chr2 115913725 115914488 -134773366 + MER4E LTR ERV1 1 766 0 2119 165 18 18 chr2 115914598 115914985 -134772869 - MLT1B LTR MaLR -1 389 3 235 355 91 9 chr2 115916109 115916219 -134771635 + L2 LINE L2 3154 3272 0 403 293 93 26 chr2 115917481 115917679 -134770175 + MIR3 SINE MIR 2 210 -52 2012 154 128 13 chr2 115917679 115918063 -134769791 - MSTA LTR MaLR 0 428 1 403 293 93 26 chr2 115918063 115918094 -134769760 + MIR3 SINE MIR 210 237 -25 310 291 45 52 chr2 115918346 115918480 -134769374 + MIR3 SINE MIR 22 154 -54 2020 142 0 0 chr2 115919188 115919483 -134768371 + AluSx SINE Alu 10 304 -8 5014 27 2 2 chr2 115919734 115920321 -134767533 + L1PA3 LINE L1 5567 6153 -2 1365 239 70 28 chr2 115921341 115921772 -134766082 + MLT1C LTR MaLR 1 449 -18 6090 132 17 21 chr2 115921806 115922892 -134764962 - Ricksha DNA DNA -475 2771 1691 681 196 5 10 chr2 115922893 115923085 -134764769 - Ricksha DNA DNA -1762 284 1 411 261 98 90 chr2 115923378 115923623 -134764231 + MIR SINE MIR 13 259 -3 408 200 15 92 chr2 115924497 115924570 -134763284 + MER58B DNA MER1_type 222 282 -2138 2199 116 0 0 chr2 115924570 115924862 -134762992 - AluSg SINE Alu -18 292 1 408 200 15 92 chr2 115924862 115924918 -134762936 + MER58B DNA MER1_type 282 341 0 22 35 0 0 chr2 115925384 115925413 -134762441 + AT_rich Low_complexity Low_complexity 1 29 0 252 271 0 0 chr2 115925530 115925615 -134762239 + Charlie8 DNA MER1_type 92 176 -2241 185 209 23 23 chr2 115926285 115926328 -134761526 - MIR SINE MIR -73 135 93 959 205 61 73 chr2 115927706 115928033 -134759821 + MER5C DNA MER1_type 1 323 -1 363 32 32 16 chr2 115928142 115928204 -134759650 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 7564 9 1 0 chr2 115928208 115929106 -134758748 - L1PA2 LINE L1 -3 6152 5254 752 184 81 0 chr2 115929350 115929540 -134758314 - AluSg/x SINE Alu 0 336 136 299 276 8 98 chr2 115930080 115930140 -134757714 + MER5B DNA MER1_type 67 112 -66 2424 71 0 0 chr2 115930140 115930434 -134757420 - AluY SINE Alu -17 294 1 299 276 8 98 chr2 115930434 115930496 -134757358 + MER5B DNA MER1_type 112 178 0 464 252 166 13 chr2 115931660 115931811 -134756043 - MER5A DNA MER1_type 0 189 16 555 195 81 0 chr2 115931829 115931952 -134755902 - MER5A DNA MER1_type -56 133 1 358 211 296 7 chr2 115932417 115932559 -134755295 - MER5A DNA MER1_type -5 184 2 285 308 29 10 chr2 115933164 115933268 -134754586 + MIR SINE MIR 90 195 -67 2467 74 0 0 chr2 115933429 115933739 -134754115 + AluY SINE Alu 1 310 -1 491 289 40 13 chr2 115934343 115934495 -134753359 + MER5B DNA MER1_type 17 172 -6 220 262 0 49 chr2 115935010 115935071 -134752783 - L2 LINE L2 0 3313 3256 912 196 6 6 chr2 115935086 115935259 -134752595 - AluJb SINE Alu -3 309 137 25 31 0 0 chr2 115935748 115935780 -134752074 + AT_rich Low_complexity Low_complexity 1 32 0 340 327 26 9 chr2 115936348 115936461 -134751393 + MER5B DNA MER1_type 1 115 -63 444 213 29 11 chr2 115936833 115937007 -134750847 + GA-rich Low_complexity Low_complexity 4 180 0 218 308 0 0 chr2 115937010 115937062 -134750792 + polypurine Low_complexity Low_complexity 1 52 0 563 189 22 22 chr2 115937062 115937242 -134750612 + GA-rich Low_complexity Low_complexity 1 180 0 784 198 66 6 chr2 115937473 115937640 -134750214 + MER5A DNA MER1_type 13 189 0 271 250 10 62 chr2 115939816 115939912 -134747942 + L2 LINE L2 2550 2640 -674 426 239 54 140 chr2 115939922 115940257 -134747597 + LTR16A1 LTR ERVL 8 313 -144 31 26 0 0 chr2 115940323 115940361 -134747493 + AT_rich Low_complexity Low_complexity 1 38 0 239 336 70 16 chr2 115940844 115940972 -134746882 - MIR SINE MIR -108 154 20 558 282 79 61 chr2 115941102 115941496 -134746358 + LTR40a LTR ERVL 1 401 -118 288 362 78 44 chr2 115942625 115943121 -134744733 - L2 LINE L2 -20 3252 2745 28 71 0 0 chr2 115944426 115944482 -134743372 + AT_rich Low_complexity Low_complexity 1 56 0 428 294 63 29 chr2 115945643 115945990 -134741864 + L1MEd LINE L1 566 924 -5195 2254 229 74 22 chr2 115946023 115946670 -134741184 + L1MD2 LINE L1 5423 6103 -256 240 86 0 0 chr2 115946696 115946731 -134741123 + (CA)n Simple_repeat Simple_repeat 1 35 0 363 255 155 58 chr2 115946974 115947085 -134740769 + L1MEd LINE L1 943 1042 -5268 208 70 47 0 chr2 115947085 115947128 -134740726 + (TA)n Simple_repeat Simple_repeat 1 45 0 363 255 155 58 chr2 115947128 115947371 -134740483 + L1MEd LINE L1 1042 1386 -4924 389 255 142 7 chr2 115947421 115947562 -134740292 + MER5B DNA MER1_type 18 177 -1 401 311 131 31 chr2 115947595 115947639 -134740215 + L1MEd LINE L1 1452 1490 -4820 2111 118 0 52 chr2 115947639 115947968 -134739886 + AluSx SINE Alu 1 312 0 401 311 131 31 chr2 115947968 115948183 -134739671 + L1MEd LINE L1 1490 1737 -4573 698 217 74 11 chr2 115948334 115948509 -134739345 - MLT1E2 LTR MaLR -440 186 1 197 65 32 0 chr2 115949561 115949592 -134738262 + (CA)n Simple_repeat Simple_repeat 1 32 0 1968 132 3 7 chr2 115951943 115952259 -134735595 - AluSx SINE Alu 0 315 1 248 274 0 0 chr2 115952794 115952845 -134735009 + MIR SINE MIR 94 144 -64 786 271 18 0 chr2 115952898 115953127 -134734727 + L1ME1 LINE L1 5873 6105 -61 191 137 0 59 chr2 115953796 115953847 -134734007 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 261 273 182 0 chr2 115953908 115954007 -134733847 - L2 LINE L2 0 3272 3156 697 306 68 0 chr2 115954683 115954905 -134732949 - MIR SINE MIR -25 237 1 213 310 88 35 chr2 115955600 115955713 -134732141 - L2 LINE L2 -13 3300 3182 218 341 133 7 chr2 115957723 115957858 -134729996 + MIR SINE MIR 5 156 -106 1019 339 22 7 chr2 115958236 115958640 -134729214 - MLT1J2 LTR MaLR -40 410 1 2413 65 0 0 chr2 115959658 115959949 -134727905 + AluY SINE Alu 1 291 -20 221 119 24 0 chr2 115962132 115962174 -134725680 + (TA)n Simple_repeat Simple_repeat 1 43 0 1756 173 11 0 chr2 115963357 115963635 -134724219 + AluJb SINE Alu 2 282 -30 239 267 40 27 chr2 115964038 115964113 -134723741 - MIR SINE MIR -114 148 73 834 292 136 30 chr2 115966756 115967256 -134720598 - L2 LINE L2 -22 3291 2722 24 32 0 0 chr2 115968052 115968083 -134719771 + AT_rich Low_complexity Low_complexity 1 31 0 1752 65 0 14 chr2 115968219 115968433 -134719421 - AluSc SINE Alu -13 296 86 238 244 441 0 chr2 115969290 115969417 -134718437 + MER5A DNA MER1_type 7 189 0 202 375 0 0 chr2 115969715 115969795 -134718059 + MIR SINE MIR 183 262 0 3372 62 0 9 chr2 115970397 115970849 -134717005 - LTR7 LTR ERV1 -2 448 1 221 379 40 8 chr2 115971024 115971148 -134716706 + MIR3 SINE MIR 33 160 -48 183 266 89 38 chr2 115971202 115971281 -134716573 + MIR SINE MIR 24 106 -156 25 51 0 0 chr2 115972068 115972107 -134715747 + AT_rich Low_complexity Low_complexity 1 39 0 2234 193 35 15 chr2 115972390 115972871 -134714983 + MER68 LTR ERV1 3 493 -69 369 0 0 0 chr2 115972916 115972957 -134714897 + (TG)n Simple_repeat Simple_repeat 2 42 0 407 234 19 0 chr2 115972958 115973065 -134714789 - L1MC4 LINE L1 -1020 7022 6914 2724 67 0 0 chr2 115973077 115973421 -134714433 - L1PA7 LINE L1 -4 6150 5807 409 233 11 11 chr2 115973443 115973533 -134714321 - L2 LINE L2 -12 3301 3212 1900 107 62 45 chr2 115975144 115975435 -134712419 + AluSq SINE Alu 1 296 -17 4514 125 8 11 chr2 115975513 115976259 -134711595 + Tigger2 DNA MER2_type 1 744 -1974 332 87 87 0 chr2 115976321 115976390 -134711464 + Tigger2 DNA MER2_type 2451 2525 -193 846 187 0 13 chr2 115976491 115976646 -134711208 + Tigger2 DNA MER2_type 2555 2707 -11 278 349 0 0 chr2 115977356 115977442 -134710412 + MIR SINE MIR 40 125 -137 1894 244 79 56 chr2 115977502 115978427 -134709427 + L1MC3 LINE L1 6832 7777 -8 601 305 7 34 chr2 115978546 115978838 -134709016 + L1ME3A LINE L1 5887 6170 0 2286 102 0 7 chr2 115978852 115979155 -134708699 + AluSq SINE Alu 1 301 -12 212 331 123 19 chr2 115980671 115980825 -134707029 - MIR SINE MIR -73 189 20 2582 61 0 0 chr2 115980988 115981298 -134706556 + AluY SINE Alu 1 310 -1 475 316 92 14 chr2 115981444 115981662 -134706192 + MIR SINE MIR 22 256 -6 2372 92 6 17 chr2 115982995 115983344 -134704510 + THE1A LTR MaLR 11 355 0 11263 93 14 9 chr2 115983344 115984917 -134702937 + THE1A-int LTR MaLR 1 1580 0 2693 90 3 0 chr2 115984917 115985271 -134702583 + THE1A LTR MaLR 1 355 0 591 313 99 25 chr2 115985572 115985637 -134702217 - MLT1I LTR MaLR 0 409 350 207 0 0 0 chr2 115985637 115985660 -134702194 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 591 313 99 25 chr2 115985660 115985958 -134701896 - MLT1I LTR MaLR -59 350 19 246 313 12 94 chr2 115986260 115986420 -134701434 - MIR SINE MIR -70 192 46 590 285 55 65 chr2 115986760 115987069 -134700785 + L2 LINE L2 2403 2708 -606 226 357 0 9 chr2 115987086 115987198 -134700656 - L1ME3A LINE L1 -21 6149 6039 1472 118 16 4 chr2 115987273 115987528 -134700326 - L1MA4 LINE L1 -7 6293 6036 21 100 0 0 chr2 115987567 115987637 -134700217 + AT_rich Low_complexity Low_complexity 1 70 0 1293 290 84 23 chr2 115987709 115988195 -134699659 - MLT1G LTR MaLR 0 590 75 941 276 8 0 chr2 115988231 115988495 -134699359 - L1ME3A LINE L1 -366 5804 5539 470 315 152 21 chr2 115988561 115988984 -134698870 + L2 LINE L2 2726 3200 -113 632 215 46 0 chr2 115989744 115989874 -134697980 - MER5A DNA MER1_type -53 136 1 210 287 0 87 chr2 115990368 115990484 -134697370 + MER5A DNA MER1_type 37 149 -40 236 188 14 0 chr2 115991454 115991523 -134696331 + (CCA)n Simple_repeat Simple_repeat 1 70 0 195 102 41 20 chr2 115991592 115991641 -134696213 + (CACCAT)n Simple_repeat Simple_repeat 3 52 0 212 197 15 30 chr2 115991649 115991715 -134696139 + (CCA)n Simple_repeat Simple_repeat 1 65 0 1570 169 62 8 chr2 115992326 115992586 -134695268 + AluJo SINE Alu 1 274 -38 315 0 0 0 chr2 115992590 115992625 -134695229 + (CA)n Simple_repeat Simple_repeat 2 36 0 290 44 0 44 chr2 115992721 115992766 -134695088 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr2 115993768 115993789 -134694065 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr2 115994000 115994046 -134693808 + (CA)n Simple_repeat Simple_repeat 2 47 0 194 158 0 26 chr2 115994185 115994223 -134693631 - L3b LINE CR1 -150 1433 1397 399 218 0 16 chr2 115994492 115994616 -134693238 - Charlie5 DNA MER1_type -22 2590 2469 262 242 16 0 chr2 115994615 115994677 -134693177 - Charlie5 DNA MER1_type -2543 69 7 * 205 310 135 53 chr2 115996181 115996282 -134691572 + L2 LINE L2 2849 2940 -332 1064 202 4 47 chr2 115996282 115996515 -134691339 - MER58A DNA MER1_type 0 224 2 205 310 135 53 chr2 115996515 115996807 -134691047 + L2 LINE L2 2940 3272 0 441 300 46 46 chr2 115997342 115997625 -134690229 - LTR33 LTR ERVL -2 519 237 287 289 11 11 chr2 115997670 115997760 -134690094 - LTR33 LTR ERVL -385 136 47 545 296 25 0 chr2 115999346 115999505 -134688349 + MIR3 SINE MIR 46 208 0 372 254 51 8 chr2 116000209 116000327 -134687527 - MIR SINE MIR -26 236 114 1982 146 44 14 chr2 116000538 116000902 -134686952 - THE1C LTR MaLR 0 375 1 9308 121 44 16 chr2 116000902 116000948 -134686906 - THE1C-int LTR MaLR 0 1580 1537 3862 144 35 6 chr2 116000948 116001574 -134686280 - LTR9B LTR ERV1 0 644 1 9308 121 44 16 chr2 116001574 116002669 -134685185 - THE1C-int LTR MaLR -43 1537 381 549 110 33 0 chr2 116002669 116002760 -134685094 - L1PA5 LINE L1 -1 6153 6060 9308 121 44 16 chr2 116002760 116003153 -134684701 - THE1C-int LTR MaLR -1199 381 1 1835 140 67 9 chr2 116003161 116003503 -134684351 - THE1C LTR MaLR -12 363 2 26 50 0 0 chr2 116004667 116004707 -134683147 + AT_rich Low_complexity Low_complexity 1 40 0 969 246 44 52 chr2 116006418 116006591 -134681263 - MER39 LTR ERV1 -4 703 530 1964 137 7 0 chr2 116006591 116006884 -134680970 - AluSg SINE Alu -15 295 1 969 246 44 52 chr2 116006884 116007076 -134680778 - MER39 LTR ERV1 -177 530 341 286 127 20 95 chr2 116007095 116007194 -134680660 - MER39 LTR ERV1 -436 263 127 246 156 0 0 chr2 116007670 116007715 -134680139 + (TG)n Simple_repeat Simple_repeat 2 46 0 275 93 0 0 chr2 116008259 116008302 -134679552 + 5S rRNA rRNA 1 43 -78 197 305 0 0 chr2 116008617 116008676 -134679178 + L2 LINE L2 3255 3313 0 1937 123 0 11 chr2 116009063 116009369 -134678485 + AluSg SINE Alu 1 303 0 1978 104 52 36 chr2 116009425 116009733 -134678121 - AluSq SINE Alu 0 313 1 201 241 130 0 chr2 116010624 116010678 -134677176 + L2 LINE L2 3248 3308 -5 315 0 0 0 chr2 116011079 116011114 -134676740 + (T)n Simple_repeat Simple_repeat 1 35 0 324 0 0 0 chr2 116012073 116012109 -134675745 + (T)n Simple_repeat Simple_repeat 1 36 0 245 29 29 0 chr2 116012908 116012942 -134674912 + (TA)n Simple_repeat Simple_repeat 2 36 0 2052 88 3 7 chr2 116013302 116013621 -134674233 + AluY SINE Alu 1 318 0 305 319 30 7 chr2 116014715 116014850 -134673004 + MIR SINE MIR 111 248 -14 195 254 0 0 chr2 116015039 116015102 -134672752 + (TA)n Simple_repeat Simple_repeat 2 64 0 394 245 5 80 chr2 116015148 116015336 -134672518 + (TA)n Simple_repeat Simple_repeat 1 174 0 345 274 11 54 chr2 116015411 116015597 -134672257 + (TA)n Simple_repeat Simple_repeat 1 178 0 465 259 10 52 chr2 116015614 116016420 -134671434 + (TA)n Simple_repeat Simple_repeat 1 771 0 7431 84 11 17 chr2 116017259 116018322 -134669532 - MER11C LTR ERVK -14 1057 1 306 167 92 18 chr2 116018769 116018845 -134669009 - MLT1I LTR MaLR -6 428 348 301 308 23 23 chr2 116019029 116019162 -134668692 - MLT1I LTR MaLR 0 409 277 234 281 126 15 chr2 116019200 116019335 -134668519 - MLT1J2 LTR MaLR -229 221 72 1510 179 72 7 chr2 116019425 116019716 -134668138 - AluSg SINE Alu 0 310 1 33 25 0 0 chr2 116019717 116019757 -134668097 + AT_rich Low_complexity Low_complexity 1 40 0 234 310 95 35 chr2 116022081 116022197 -134665657 + L2 LINE L2 3142 3264 -8 355 326 16 0 chr2 116023110 116023239 -134664615 + MER94 DNA DNA 1 131 -3 394 196 45 27 chr2 116023891 116024003 -134663851 + L1MEd LINE L1 65 178 -5941 453 338 48 45 chr2 116024024 116024379 -134663475 + L1MEd LINE L1 277 632 -5487 23 0 0 0 chr2 116025867 116025890 -134661964 + AT_rich Low_complexity Low_complexity 1 23 0 222 329 155 31 chr2 116026062 116026223 -134661631 - MIR SINE MIR -80 182 2 593 158 20 0 chr2 116026440 116026541 -134661313 + L1MC1 LINE L1 6231 6333 0 200 316 26 13 chr2 116028007 116028083 -134659771 + L2 LINE L2 2678 2754 -560 261 0 0 0 chr2 116028173 116028202 -134659652 + (CATAT)n Simple_repeat Simple_repeat 3 31 0 450 195 0 0 chr2 116028204 116028291 -134659563 - FRAM/FAM SINE Alu -88 88 2 275 355 0 47 chr2 116028570 116028677 -134659177 + L2 LINE L2 3197 3298 -15 360 324 70 28 chr2 116029328 116029655 -134658199 + L1MEd LINE L1 443 783 -5336 1361 169 55 0 chr2 116029922 116030159 -134657695 - MLT1A1 LTR MaLR -6 359 110 25 0 0 0 chr2 116030451 116030476 -134657378 + AT_rich Low_complexity Low_complexity 1 25 0 1589 156 45 52 chr2 116030476 116030764 -134657090 - AluJb SINE Alu -19 293 8 436 223 8 8 chr2 116031033 116031163 -134656691 + CT-rich Low_complexity Low_complexity 1 130 0 1293 194 111 29 chr2 116031163 116031442 -134656412 - AluJo SINE Alu -6 306 5 202 279 49 0 chr2 116032599 116032660 -134655194 - L2 LINE L2 -1 3271 3208 226 385 47 21 chr2 116033054 116033246 -134654608 + L2 LINE L2 2709 2905 -409 225 0 0 0 chr2 116033271 116033296 -134654558 + (T)n Simple_repeat Simple_repeat 1 25 0 1976 156 8 31 chr2 116033443 116033795 -134654059 - MER2 DNA MER2_type 0 344 1 915 199 34 17 chr2 116034252 116034488 -134653366 + L1ME3 LINE L1 5868 6107 -55 355 231 87 48 chr2 116034714 116034726 -134653128 - MIR SINE MIR -67 141 131 1547 238 54 68 chr2 116034726 116035301 -134652553 + MLT1F1 LTR MaLR 1 567 0 355 231 87 48 chr2 116035301 116035392 -134652462 - MIR SINE MIR -77 131 34 238 314 38 0 chr2 116035391 116035496 -134652358 + MIR SINE MIR 152 260 -2 * 213 233 0 67 chr2 116036312 116036372 -134651482 + polypurine Low_complexity Low_complexity 5 60 0 21 36 0 0 chr2 116036627 116036655 -134651199 + AT_rich Low_complexity Low_complexity 1 28 0 1128 311 99 39 chr2 116037212 116038056 -134649798 + L1ME3A LINE L1 5255 6139 -31 236 300 80 93 chr2 116038100 116038337 -134649517 - MIR SINE MIR -1 261 28 329 120 0 0 chr2 116038871 116038921 -134648933 + MADE1 DNA Mariner 26 75 -5 267 192 0 192 chr2 116039134 116039187 -134648667 + MIR SINE MIR 66 91 -171 2054 126 7 3 chr2 116039187 116039496 -134648358 - AluSx SINE Alu -2 310 1 267 192 0 192 chr2 116039496 116039546 -134648308 + MIR SINE MIR 91 149 -113 289 262 110 58 chr2 116039937 116040128 -134647726 - MIR SINE MIR -26 236 36 1716 122 0 119 chr2 116040252 116040596 -134647258 + AluSq SINE Alu 1 303 0 455 293 146 12 chr2 116041079 116041243 -134646611 - MER5A DNA MER1_type 0 189 4 254 396 66 16 chr2 116041488 116041670 -134646184 - MIR SINE MIR -15 247 57 22 35 0 0 chr2 116041695 116041724 -134646130 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 116042697 116042718 -134645136 + AT_rich Low_complexity Low_complexity 1 21 0 1040 309 27 41 chr2 116044488 116044857 -134642997 + MLT2E LTR ERVL 3 366 -262 246 272 111 12 chr2 116045482 116045563 -134642291 - L2 LINE L2 -13 3259 3171 2006 124 7 0 chr2 116047038 116047359 -134640495 + AluSx SINE Alu 1 323 0 198 0 0 0 chr2 116047471 116047493 -134640361 + (GAAAA)n Simple_repeat Simple_repeat 4 25 0 637 221 40 7 chr2 116047728 116047877 -134639977 - MIR SINE MIR -44 218 65 421 332 94 8 chr2 116050027 116050262 -134637592 + MIR SINE MIR 8 262 0 227 173 19 0 chr2 116050403 116050455 -134637399 + (TA)n Simple_repeat Simple_repeat 1 53 0 2384 215 9 7 chr2 116050537 116050993 -134636861 - MER70A LTR ERVL -10 462 6 237 379 0 0 chr2 116051026 116051129 -134636725 + MIR SINE MIR 13 115 -147 519 332 51 23 chr2 116051372 116051589 -134636265 + MIR SINE MIR 40 262 0 440 71 0 192 chr2 116052596 116052695 -134635159 - MADE1 DNA Mariner 0 80 1 23 0 0 0 chr2 116052823 116052846 -134635008 + AT_rich Low_complexity Low_complexity 1 23 0 254 89 0 22 chr2 116052846 116052891 -134634963 - L1PA16 LINE L1 -9 6157 6114 18556 110 22 9 chr2 116052921 116053306 -134634548 + Charlie3 DNA MER1_type 2 381 -2325 2228 145 8 19 chr2 116053306 116053685 -134634169 - THE1C LTR MaLR 0 375 1 18556 110 22 9 chr2 116053685 116055970 -134631884 + Charlie3 DNA MER1_type 381 2706 0 263 347 88 7 chr2 116055973 116056120 -134631734 - MIR SINE MIR -101 161 3 210 367 70 32 chr2 116056417 116056575 -134631279 - L2 LINE L2 -3 3269 3106 304 341 101 12 chr2 116057614 116057798 -134630056 + MIR SINE MIR 3 202 -60 254 348 32 19 chr2 116057814 116057969 -134629885 + L2 LINE L2 2420 2576 -738 633 172 8 60 chr2 116057977 116058015 -134629839 - MER20 DNA MER1_type 0 219 181 3747 219 81 16 chr2 116058015 116058992 -134628862 - MER45B DNA AcHobo 0 1040 1 633 172 8 60 chr2 116058992 116059087 -134628767 - MER20 DNA MER1_type -38 181 93 3442 140 16 13 chr2 116059502 116060111 -134627743 - L1MA4 LINE L1 -7 6293 5683 209 243 0 0 chr2 116060455 116060492 -134627362 - L2 LINE L2 -86 3186 3150 1170 81 9 18 chr2 116062608 116062857 -134624997 + (TCTA)n Simple_repeat Simple_repeat 1 424 0 27 29 0 0 chr2 116063297 116063331 -134624523 + AT_rich Low_complexity Low_complexity 1 34 0 * 3302 108 11 45 chr2 116063311 116063894 -134623960 + L1PB2 LINE L1 5593 6151 0 1081 215 69 4 chr2 116065495 116065755 -134622099 - MLT1D LTR MaLR -49 456 180 2150 83 0 17 chr2 116065766 116066067 -134621787 - L1PB1 LINE L1 0 6151 5856 2191 188 31 5 chr2 116066261 116066677 -134621177 - MSTA LTR MaLR -1 427 1 424 346 74 4 chr2 116066972 116067203 -134620651 + MIR SINE MIR 1 247 -15 24 32 0 0 chr2 116067851 116067882 -134619972 + AT_rich Low_complexity Low_complexity 1 31 0 248 321 28 23 chr2 116068929 116069061 -134618793 + MIR SINE MIR 21 150 -63 2455 65 0 13 chr2 116069067 116069376 -134618478 + AluY SINE Alu 6 310 -1 2017 161 51 5 chr2 116070089 116070462 -134617392 + MLT1B LTR MaLR 1 390 0 210 161 54 0 chr2 116070594 116070650 -134617204 + (TA)n Simple_repeat Simple_repeat 1 59 0 228 302 70 47 chr2 116071179 116071308 -134616546 - L2 LINE L2 -8 3264 3133 208 234 0 0 chr2 116071846 116071893 -134615961 - L2 LINE L2 -2 3311 3265 249 33 0 0 chr2 116073138 116073168 -134614686 + (TCTG)n Simple_repeat Simple_repeat 1 30 0 25 31 0 0 chr2 116075729 116075761 -134612093 + AT_rich Low_complexity Low_complexity 1 32 0 475 296 26 21 chr2 116076176 116076365 -134611489 + MIR SINE MIR 73 262 0 640 311 85 29 chr2 116076522 116076937 -134610917 + MLT1J2 LTR MaLR 1 448 -2 207 381 40 32 chr2 116076937 116077063 -134610791 + MIR3 SINE MIR 15 141 -67 12402 32 1 1 chr2 116077081 116078572 -134609282 - L1PA3 LINE L1 -1136 5010 3520 7573 31 1 0 chr2 116078572 116079711 -134608143 + L1PA3 LINE L1 5012 6152 -3 299 249 48 85 chr2 116080487 116080726 -134607128 - L1ME3A LINE L1 0 6170 5940 759 199 39 67 chr2 116080761 116080878 -134606976 - L1ME3A LINE L1 -208 5962 5843 2517 49 0 10 chr2 116080878 116081184 -134606670 + AluY SINE Alu 1 303 -8 759 199 39 67 chr2 116081184 116081348 -134606506 - L1ME3A LINE L1 -327 5843 5689 255 192 128 13 chr2 116081344 116081422 -134606432 + L1MB1 LINE L1 6079 6165 -3 * 400 302 123 10 chr2 116081541 116081963 -134605891 - L1ME3A LINE L1 -606 5556 5087 6183 143 25 22 chr2 116082058 116082382 -134605472 + HSMAR2 DNA Mariner 2 323 -979 2157 96 3 0 chr2 116082382 116082698 -134605156 - AluY SINE Alu 0 317 1 6183 143 25 22 chr2 116082698 116083432 -134604422 + HSMAR2 DNA Mariner 323 1065 -237 712 297 43 9 chr2 116083474 116083801 -134604053 - L1ME3A LINE L1 -1188 4958 4621 5252 163 41 4 chr2 116083831 116084800 -134603054 - L1MC1 LINE L1 0 6402 5398 1054 260 53 29 chr2 116084852 116085194 -134602660 + MLT1B LTR MaLR 18 367 -23 2707 215 68 14 chr2 116085215 116085843 -134602011 + MLT1B-int LTR MaLR 1 662 -709 305 227 0 0 chr2 116085855 116085921 -134601933 + MLT1B-int LTR MaLR 819 884 -487 507 248 65 48 chr2 116086370 116086680 -134601174 - L1MC1 LINE L1 -1482 4733 4419 1122 101 6 0 chr2 116086681 116086849 -134601005 - L1PA13 LINE L1 -6 6157 5989 477 79 0 0 chr2 116086853 116086916 -134600938 + L1P4 LINE L1 5609 5671 -497 842 179 0 0 chr2 116086916 116087050 -134600804 - AluJo SINE Alu -178 134 1 5142 261 57 34 chr2 116087051 116087299 -134600555 - L1MC1 LINE L1 -1806 4409 4168 1954 137 7 19 chr2 116087299 116087606 -134600248 + AluSx SINE Alu 1 303 -9 5142 261 57 34 chr2 116087606 116089805 -134598049 - L1MC1 LINE L1 -2047 4168 1929 675 255 26 13 chr2 116089900 116090131 -134597723 - L1ME3A LINE L1 -2201 3945 3712 22 56 0 0 chr2 116090191 116090227 -134597627 + AT_rich Low_complexity Low_complexity 1 36 0 365 318 23 8 chr2 116090341 116090470 -134597384 + MIR SINE MIR 37 167 -95 366 356 62 29 chr2 116090934 116091142 -134596712 + L1MEd LINE L1 561 775 -5344 264 188 0 0 chr2 116091187 116091251 -134596603 + (TA)n Simple_repeat Simple_repeat 1 64 0 732 186 161 21 chr2 116091292 116091337 -134596517 + ORSL DNA AcHobo 6 43 -232 194 0 0 37 chr2 116091337 116091364 -134596490 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 732 186 161 21 chr2 116091364 116091554 -134596300 + ORSL DNA AcHobo 43 274 -1 248 285 24 41 chr2 116091593 116091716 -134596138 + L1MEd LINE L1 895 1015 -5104 443 330 129 24 chr2 116092543 116093143 -134594711 - L2 LINE L2 0 3313 2579 226 274 0 0 chr2 116093322 116093373 -134594481 + (CA)n Simple_repeat Simple_repeat 2 52 0 7930 242 44 19 chr2 116093706 116096051 -134591803 + L1PA15 LINE L1 1 3022 -3775 2678 32 0 0 chr2 116096051 116096360 -134591494 + AluYa5 SINE Alu 1 309 -2 7930 242 44 19 chr2 116096360 116097901 -134589953 + L1PA15 LINE L1 3022 4524 -2273 7000 196 13 9 chr2 116098003 116100337 -134587517 + L1PA15 LINE L1 4455 6816 0 395 266 198 24 chr2 116100415 116100622 -134587232 - L2 LINE L2 -797 2517 2275 187 313 47 0 chr2 116100798 116100862 -134586992 + L3 LINE CR1 1509 1575 -2 541 314 162 38 chr2 116101165 116101480 -134586374 - MLT1G LTR MaLR -196 394 41 558 287 128 29 chr2 116102236 116102650 -134585204 + Charlie2a DNA MER1_type 22 476 -2306 * 712 260 55 0 chr2 116102637 116102872 -134584982 + Charlie2a DNA MER1_type 725 972 -1890 340 219 21 10 chr2 116102904 116103000 -134584854 + Charlie2a DNA MER1_type 2749 2845 -17 265 341 43 49 chr2 116103040 116103204 -134584650 + L2 LINE L2 3110 3272 0 2380 179 50 74 chr2 116103417 116103682 -134584172 - L1MB7 LINE L1 0 6184 5914 1955 144 11 0 chr2 116103682 116103966 -134583888 - AluSx SINE Alu -25 287 1 2380 179 50 74 chr2 116103966 116104338 -134583516 - L1MB7 LINE L1 -270 5914 5562 954 219 42 33 chr2 116104346 116104529 -134583325 - L1MB7 LINE L1 -749 5397 5217 2017 110 59 0 chr2 116104529 116104819 -134583035 - AluSg SINE Alu -3 307 1 2335 65 48 0 chr2 116104827 116105120 -134582734 - AluY SINE Alu -4 307 1 954 219 42 33 chr2 116105120 116105233 -134582621 - L1MB7 LINE L1 -935 5211 5089 739 200 0 0 chr2 116105247 116105377 -134582477 - FLAM_C SINE Alu -2 131 2 1910 145 3 3 chr2 116105612 116105908 -134581946 + AluSx SINE Alu 15 310 -2 221 0 0 33 chr2 116106147 116106177 -134581677 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2266 99 0 3 chr2 116106284 116106587 -134581267 + AluSg SINE Alu 1 302 -8 425 223 21 21 chr2 116106599 116106693 -134581161 - MER5A DNA MER1_type -86 103 10 2270 81 10 0 chr2 116108320 116108616 -134579238 - AluY SINE Alu -12 299 1 1247 170 75 77 chr2 116108740 116109086 -134578768 - MER4A LTR ERV1 0 664 261 284 67 22 22 chr2 116109086 116109131 -134578723 - MER4A LTR ERV1 -566 98 54 2318 138 57 31 chr2 116109159 116109580 -134578274 - MSTB1 LTR MaLR 0 432 1 4894 255 47 52 chr2 116109580 116110395 -134577459 - MSTB1-int LTR MaLR 0 1580 762 5481 157 24 31 chr2 116110395 116111474 -134576380 - MER11C LTR ERVK 0 1071 1 4894 255 47 52 chr2 116111474 116112082 -134575772 - MSTB1-int LTR MaLR -818 762 163 2064 193 40 12 chr2 116112082 116112502 -134575352 - MSTB1 LTR MaLR 0 432 1 4894 255 47 52 chr2 116112502 116112663 -134575191 - MSTB1-int LTR MaLR -1417 163 3 2132 178 24 19 chr2 116112677 116113094 -134574760 - MSTB1 LTR MaLR -13 419 1 250 316 68 8 chr2 116113145 116113262 -134574592 + MIR SINE MIR 28 151 -111 670 197 55 33 chr2 116113276 116113459 -134574395 - MER53 DNA DNA -1 188 2 642 216 120 0 chr2 116113542 116113709 -134574145 + MER5A DNA MER1_type 3 189 0 1727 235 53 31 chr2 116113730 116114278 -134573576 + L1ME3 LINE L1 5595 6154 -8 215 336 51 36 chr2 116114568 116114705 -134573149 - L2 LINE L2 -34 3279 3141 686 250 68 0 chr2 116115189 116115365 -134572489 - MER5A DNA MER1_type -1 188 1 2364 159 2 44 chr2 116115631 116116083 -134571771 - Tigger2a DNA MER2_type 0 434 2 237 65 0 0 chr2 116116084 116116115 -134571739 + (TG)n Simple_repeat Simple_repeat 2 32 0 314 346 10 0 chr2 116116434 116116535 -134571319 - L2 LINE L2 -2 3270 3169 194 290 9 112 chr2 116117191 116117298 -134570556 - MER5A DNA MER1_type -75 114 19 194 296 83 83 chr2 116117294 116117402 -134570452 + MER5B DNA MER1_type 12 119 -59 199 27 27 54 chr2 116117435 116117472 -134570382 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2566 84 8 3 chr2 116117472 116117829 -134570025 - L1PB1 LINE L1 -11 6140 5782 291 210 99 0 chr2 116117830 116117911 -134569943 - L1MC4 LINE L1 -1339 6703 6615 3323 171 11 14 chr2 116117916 116118889 -134568965 - L1P5 LINE L1 -361 5790 4818 681 110 0 0 chr2 116119182 116119273 -134568581 + 5S rRNA rRNA 2 92 -29 180 255 59 0 chr2 116119283 116119334 -134568520 - MER5B DNA MER1_type -124 54 1 1065 148 16 0 chr2 116120554 116120737 -134567117 - Tigger2 DNA MER2_type -166 2552 2367 22 0 0 0 chr2 116122842 116122864 -134564990 + AT_rich Low_complexity Low_complexity 1 22 0 2194 103 0 0 chr2 116123299 116123591 -134564263 + AluY SINE Alu 1 292 -19 225 133 0 0 chr2 116123591 116123636 -134564218 - LTR66 LTR ERVL -172 438 394 328 247 99 0 chr2 116123649 116123730 -134564124 - L1MC4 LINE L1 -1340 6702 6614 3725 77 0 25 chr2 116124206 116124586 -134563268 - L1PA7 LINE L1 0 6154 5789 2254 109 0 0 chr2 116124586 116124879 -134562975 - AluSg SINE Alu -17 293 1 3725 77 0 25 chr2 116124879 116125021 -134562833 - L1PA7 LINE L1 -365 5789 5645 421 270 258 32 chr2 116125024 116125424 -134562430 - L1ME4a LINE L1 -3 6118 5629 180 350 0 0 chr2 116126007 116126067 -134561787 - MIR SINE MIR -49 213 154 1793 222 47 24 chr2 116126190 116126829 -134561025 + L1MC/D LINE L1 4783 5433 -743 2164 111 0 3 chr2 116126840 116127146 -134560708 + AluSq SINE Alu 1 305 -8 2229 173 151 2 chr2 116127154 116127656 -134560198 + L1MC3 LINE L1 7206 7782 -3 607 144 93 7 chr2 116127664 116127803 -134560051 + L1MB2 LINE L1 6018 6168 -3 21 0 0 0 chr2 116127804 116127825 -134560029 + AT_rich Low_complexity Low_complexity 1 21 0 957 294 50 23 chr2 116127861 116128378 -134559476 - L1M4 LINE L1 -2251 3895 3365 606 349 52 39 chr2 116129122 116129665 -134558189 - L1MEd LINE L1 -1031 1459 820 24 0 0 0 chr2 116129850 116129874 -134557980 + AT_rich Low_complexity Low_complexity 1 24 0 1697 155 45 58 chr2 116130029 116130234 -134557620 - THE1C LTR MaLR 0 375 176 2262 91 0 0 chr2 116130234 116130530 -134557324 - AluSg SINE Alu -14 296 1 1697 155 45 58 chr2 116130530 116130704 -134557150 - THE1C LTR MaLR -199 176 1 655 242 28 34 chr2 116130781 116130959 -134556895 - MER5A DNA MER1_type -6 183 7 483 336 113 13 chr2 116231253 116231482 -134456372 + MIR SINE MIR 11 262 0 198 0 0 0 chr2 116232948 116232970 -134454884 + (T)n Simple_repeat Simple_repeat 1 22 0 569 275 43 33 chr2 116235378 116235589 -134452265 + MIR SINE MIR 17 229 -33 1663 167 43 10 chr2 116236011 116236310 -134451544 - AluJo SINE Alu -3 309 1 21 36 0 0 chr2 116236404 116236432 -134451422 + AT_rich Low_complexity Low_complexity 1 28 0 187 273 36 18 chr2 116236712 116236767 -134451087 - MIR3 SINE MIR -27 181 126 2215 92 0 3 chr2 116237196 116237489 -134450365 + AluSc SINE Alu 1 292 -17 366 80 0 0 chr2 116239504 116239554 -134448300 + (CA)n Simple_repeat Simple_repeat 1 50 0 358 266 90 28 chr2 116240346 116240523 -134447331 - MIR SINE MIR -10 252 65 1317 180 75 19 chr2 116241084 116241351 -134446503 + AluJb SINE Alu 5 286 -26 5429 241 63 19 chr2 116241355 116243905 -134443949 - L1MB5 LINE L1 -100 6572 3883 1223 208 25 113 chr2 116243905 116244305 -134443549 - MLT1A1 LTR MaLR 0 365 1 3093 258 46 29 chr2 116244305 116245272 -134442582 - L1MB5 LINE L1 -3664 2980 2031 2049 127 0 3 chr2 116245272 116245572 -134442282 + AluSq SINE Alu 1 299 -14 3093 258 46 29 chr2 116245572 116246577 -134441277 - L1MB5 LINE L1 -4613 2031 858 299 164 0 0 chr2 116246737 116246792 -134441062 - L1MB5 LINE L1 -5773 769 715 13451 159 27 7 chr2 116246930 116248323 -134439531 - Tigger1 DNA MER2_type 0 2418 956 1508 128 0 5 chr2 116248323 116248542 -134439312 + AluSc SINE Alu 74 291 -18 13451 159 27 7 chr2 116248542 116249518 -134438336 - Tigger1 DNA MER2_type -1462 956 1 4166 247 54 25 chr2 116249788 116250431 -134437423 - Charlie1a DNA MER1_type -1345 1416 793 5848 167 58 7 chr2 116250431 116251602 -134436252 + Tigger3b DNA MER2_type 1 1231 0 4166 247 54 25 chr2 116251602 116252280 -134435574 - Charlie1a DNA MER1_type -1968 793 57 202 375 10 0 chr2 116252636 116252740 -134435114 + L3b LINE CR1 1161 1265 -318 312 387 8 8 chr2 116253058 116253182 -134434672 - MIR3 SINE MIR -48 160 37 22 35 0 0 chr2 116253505 116253534 -134434320 + AT_rich Low_complexity Low_complexity 1 29 0 5243 52 1 1 chr2 116253692 116254347 -134433507 - L1PA5 LINE L1 0 6154 5500 27439 47 4 0 chr2 116254449 116257912 -134429942 - L1PA5 LINE L1 -1018 5128 1652 1920 80 0 4 chr2 116257909 116258171 -134429683 + L1PA5 LINE L1 1414 1674 -4472 * 2046 165 8 22 chr2 116258929 116259298 -134428556 - THE1B LTR MaLR 0 364 1 23 33 0 0 chr2 116259308 116259338 -134428516 + AT_rich Low_complexity Low_complexity 1 30 0 345 24 0 0 chr2 116260548 116260590 -134427264 + (TC)n Simple_repeat Simple_repeat 2 43 0 24 0 0 0 chr2 116260761 116260785 -134427069 + AT_rich Low_complexity Low_complexity 1 24 0 379 236 222 21 chr2 116261423 116261567 -134426287 + MIR SINE MIR 1 173 -89 234 0 0 0 chr2 116261651 116261677 -134426177 + (A)n Simple_repeat Simple_repeat 1 26 0 212 175 35 18 chr2 116261811 116261868 -134425986 + GA-rich Low_complexity Low_complexity 2 59 0 27 0 0 0 chr2 116262025 116262052 -134425802 + AT_rich Low_complexity Low_complexity 1 27 0 762 195 0 69 chr2 116262441 116262615 -134425239 - FRAM SINE Alu -15 161 1 4181 223 46 43 chr2 116262622 116264097 -134423757 + L1MD2 LINE L1 4855 6332 -27 26 50 0 0 chr2 116264573 116264613 -134423241 + AT_rich Low_complexity Low_complexity 1 40 0 29 60 0 0 chr2 116264731 116264781 -134423073 + AT_rich Low_complexity Low_complexity 1 50 0 4123 145 32 33 chr2 116265256 116266068 -134421786 - L1MC1 LINE L1 0 6333 5523 1631 156 0 49 chr2 116266196 116266503 -134421351 - AluSx SINE Alu -20 292 1 22 0 0 0 chr2 116267946 116267968 -134419886 + AT_rich Low_complexity Low_complexity 1 22 0 1189 124 0 0 chr2 116267978 116268147 -134419707 + AluSg/x SINE Alu 136 304 -8 21 0 0 0 chr2 116269934 116269955 -134417899 + AT_rich Low_complexity Low_complexity 1 21 0 3668 163 21 42 chr2 116270984 116271471 -134416383 - MER39 LTR ERV1 -5 702 233 3762 79 0 0 chr2 116271471 116271964 -134415890 - L1PA7 LINE L1 0 6154 5662 3668 163 21 42 chr2 116271964 116272193 -134415661 - MER39 LTR ERV1 -474 233 1 380 80 0 67 chr2 116272474 116272549 -134415305 - L1PA16 LINE L1 0 6166 6097 251 330 61 0 chr2 116272866 116272981 -134414873 - MER5C DNA MER1_type -200 124 3 199 325 83 17 chr2 116273300 116273420 -134414434 + MIR SINE MIR 79 206 -56 383 372 29 0 chr2 116274044 116274251 -134413603 + L1MC4a LINE L1 5701 5913 -1895 252 268 92 7 chr2 116274260 116274402 -134413452 + L1ME4a LINE L1 5933 6086 -35 252 192 19 0 chr2 116274772 116274824 -134413030 + L1PA15 LINE L1 6080 6132 -33 3772 169 10 3 chr2 116274843 116275522 -134412332 + L1PA16 LINE L1 5474 6157 -9 21 71 0 0 chr2 116276219 116276261 -134411593 + AT_rich Low_complexity Low_complexity 1 42 0 190 240 20 0 chr2 116276295 116276345 -134411509 - L2 LINE L2 -5 3267 3217 204 163 0 0 chr2 116276511 116276554 -134411300 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 180 289 115 0 chr2 116276582 116276634 -134411220 - L2 LINE L2 -41 3231 3174 21 0 0 0 chr2 116277891 116277912 -134409942 + AT_rich Low_complexity Low_complexity 1 21 0 3207 135 30 78 chr2 116278141 116278433 -134409421 - L1PA16 LINE L1 -1 6165 5874 1494 197 24 73 chr2 116278433 116278572 -134409282 - L1MA3 LINE L1 -399 5906 5762 9081 122 6 0 chr2 116278572 116280793 -134407061 - L1PA8A LINE L1 0 6131 3951 1494 197 24 73 chr2 116280793 116281104 -134406750 - L1MA3 LINE L1 -543 5762 5478 759 204 17 0 chr2 116281029 116281201 -134406653 - L1PA16 LINE L1 -131 6035 5478 * 8585 134 48 38 chr2 116281242 116282702 -134405152 - THE1C-int LTR MaLR -106 1474 1 2422 124 11 8 chr2 116282702 116283058 -134404796 - THE1C LTR MaLR 0 375 19 4633 252 51 16 chr2 116283063 116284605 -134403249 - L1PA12 LINE L1 -3891 2906 1394 324 365 6 19 chr2 116285273 116285429 -134402425 - L1PA12 LINE L1 -5271 1516 1363 * 918 319 38 36 chr2 116285427 116285950 -134401904 - L1PA12 LINE L1 -6177 610 1 301 171 23 0 chr2 116286008 116286096 -134401758 + (TG)n Simple_repeat Simple_repeat 1 90 0 196 302 32 16 chr2 116286405 116286468 -134401386 - MIR SINE MIR -63 145 82 356 340 27 20 chr2 116286587 116286734 -134401120 + L3 LINE CR1 1430 1577 0 205 276 13 118 chr2 116287594 116287746 -134400108 + MIR SINE MIR 92 227 -35 208 294 0 0 chr2 116287788 116287839 -134400015 + MIR SINE MIR 82 132 -76 356 288 74 28 chr2 116287848 116288051 -134399803 - MIR SINE MIR 0 262 46 219 323 77 0 chr2 116288748 116288813 -134399041 + L2 LINE L2 3210 3279 -34 28 29 0 0 chr2 116290153 116290188 -134397666 + AT_rich Low_complexity Low_complexity 1 35 0 260 35 0 69 chr2 116292800 116292858 -134394996 + (TTTAA)n Simple_repeat Simple_repeat 4 57 0 723 283 40 0 chr2 116294759 116294932 -134392922 - MER5A DNA MER1_type -9 180 1 193 311 27 0 chr2 116295806 116295880 -134391974 + L3 LINE CR1 1321 1396 -181 295 307 53 9 chr2 116297074 116297188 -134390666 - L2 LINE L2 -160 3112 2994 1616 195 144 3 chr2 116297734 116297921 -134389933 - MSTA LTR MaLR 0 428 269 180 0 0 0 chr2 116297921 116297941 -134389913 + (GA)n Simple_repeat Simple_repeat 2 21 0 1616 195 144 3 chr2 116297941 116298127 -134389727 - MSTA LTR MaLR -159 269 2 7831 152 83 35 chr2 116298128 116299633 -134388221 - MSTA-int LTR MaLR 0 1580 3 1498 172 183 14 chr2 116299635 116300001 -134387853 - MSTA LTR MaLR 0 428 1 41802 40 21 2 chr2 116300581 116306603 -134381251 - L1PA3 LINE L1 0 6155 13 2078 134 73 15 chr2 116307181 116307523 -134380331 + THE1B LTR MaLR 1 362 -2 28 91 0 0 chr2 116307706 116307783 -134380071 + AT_rich Low_complexity Low_complexity 1 77 0 2706 179 109 66 chr2 116308051 116308258 -134379596 + MER39 LTR ERV1 1 198 -509 789 219 7 7 chr2 116308258 116308409 -134379445 + FRAM SINE Alu 2 152 -14 2706 179 109 66 chr2 116308409 116308424 -134379430 + MER39 LTR ERV1 198 211 -496 1142 57 8 41 chr2 116308424 116308793 -134379061 + (GAA)n Simple_repeat Simple_repeat 1 357 0 2706 179 109 66 chr2 116308793 116308842 -134379012 + MER39 LTR ERV1 211 256 -451 2147 139 11 6 chr2 116308842 116309195 -134378659 + THE1A LTR MaLR 1 355 0 2706 179 109 66 chr2 116309195 116309369 -134378485 + MER39 LTR ERV1 256 421 -286 2200 120 0 13 chr2 116309369 116309686 -134378168 - AluSq SINE Alu 0 313 1 2706 179 109 66 chr2 116309686 116309914 -134377940 + MER39 LTR ERV1 421 707 0 21 0 0 0 chr2 116310045 116310066 -134377788 + AT_rich Low_complexity Low_complexity 1 21 0 1552 213 60 67 chr2 116310285 116310849 -134377005 - MER34B LTR ERV1 0 585 10 290 264 38 0 chr2 116311629 116311735 -134376119 - MER53 DNA DNA -73 116 7 293 270 195 38 chr2 116311855 116312014 -134375840 - L2 LINE L2 -106 3207 3024 517 301 107 29 chr2 116312252 116312561 -134375293 - L2 LINE L2 -444 2870 2538 204 241 35 46 chr2 116312658 116312745 -134375109 + L2 LINE L2 3134 3219 -94 309 26 0 0 chr2 116313292 116313330 -134374524 + (CA)n Simple_repeat Simple_repeat 2 39 0 32 0 0 0 chr2 116315706 116315738 -134372116 + AT_rich Low_complexity Low_complexity 1 32 0 222 311 176 0 chr2 116316005 116316124 -134371730 + MIR3 SINE MIR 42 181 -27 21 36 0 0 chr2 116317020 116317048 -134370806 + AT_rich Low_complexity Low_complexity 1 28 0 2015 139 7 0 chr2 116317061 116317356 -134370498 + AluSx SINE Alu 1 297 -15 189 344 60 73 chr2 116317791 116317942 -134369912 - L2 LINE L2 -204 3068 2920 210 71 0 0 chr2 116318500 116318528 -134369326 + (A)n Simple_repeat Simple_repeat 1 28 0 1522 208 20 52 chr2 116319090 116319490 -134368364 - MLT1B LTR MaLR -3 387 1 2225 156 46 17 chr2 116323865 116324281 -134363573 - MSTA LTR MaLR 0 428 1 370 222 14 0 chr2 116324598 116324670 -134363184 - Tigger5 DNA MER2_type 0 2323 2251 1226 227 18 28 chr2 116325341 116325623 -134362231 + AluJo SINE Alu 14 292 -20 659 268 0 15 chr2 116325774 116325979 -134361875 + L1M3b LINE L1 1332 1533 -5326 * 946 287 57 37 chr2 116325977 116326381 -134361473 + L1 LINE L1 1 412 -5869 3891 199 29 120 chr2 116326402 116327417 -134360437 + L1 LINE L1 3423 4529 -1821 2069 140 3 13 chr2 116327417 116327732 -134360122 - AluSx SINE Alu 0 312 1 3891 199 29 120 chr2 116327732 116328077 -134359777 + L1 LINE L1 4529 4640 -1710 2381 153 57 0 chr2 116328077 116328481 -134359373 - MSTA LTR MaLR -1 427 1 3891 199 29 120 chr2 116328481 116328601 -134359253 + L1 LINE L1 4640 4769 -1581 1137 228 139 43 chr2 116328601 116329018 -134358836 - MSTB2 LTR MaLR 0 457 1 4616 243 129 25 chr2 116329018 116330425 -134357429 - MSTB2-int LTR MaLR 0 1651 99 226 128 21 0 chr2 116330488 116330535 -134357319 + L1MA7 LINE L1 6159 6206 -85 * 1055 241 38 26 chr2 116330532 116330951 -134356903 + L1M3b LINE L1 3012 3435 -3522 2291 155 15 23 chr2 116330961 116331360 -134356494 - MER61B LTR ERV1 -29 396 1 5332 134 48 12 chr2 116331360 116332242 -134355612 - MER61B-int LTR ERV1 -1 5216 4304 1393 156 0 4 chr2 116332263 116332488 -134355366 - MER61B LTR ERV1 -201 224 1 1537 275 45 33 chr2 116332488 116333342 -134354512 + L1M3b LINE L1 3432 4295 -2662 3818 134 11 3 chr2 116333411 116334029 -134353825 + L1PB2 LINE L1 5360 5982 -169 926 119 0 0 chr2 116334021 116334155 -134353699 - L1P LINE L1 -1119 5027 4894 * 3316 105 42 0 chr2 116334155 116334648 -134353206 + L1PA10 LINE L1 5638 6152 -16 1161 105 37 5 chr2 116334658 116334848 -134353006 + L1PB2 LINE L1 5951 6146 -5 2257 109 0 13 chr2 116335076 116335388 -134352466 + AluSg SINE Alu 1 308 -2 1167 214 74 63 chr2 116335483 116335914 -134351940 - MER110A LTR ERV1 -32 436 1 206 306 0 42 chr2 116336032 116336104 -134351750 - L2 LINE L2 0 3272 3204 344 366 20 20 chr2 116338217 116338370 -134349484 - MIR3 SINE MIR -25 183 31 223 299 113 0 chr2 116338401 116338498 -134349356 + L2 LINE L2 3202 3309 -4 369 0 0 0 chr2 116339864 116339905 -134347949 + (TA)n Simple_repeat Simple_repeat 2 42 0 197 368 26 17 chr2 116340721 116340838 -134347016 - L2 LINE L2 -19 3253 3136 575 282 61 42 chr2 116341497 116341757 -134346097 - MIR SINE MIR -1 261 3 674 259 17 65 chr2 116342100 116342332 -134345522 - L2 LINE L2 -743 2571 2351 308 169 0 34 chr2 116342341 116342400 -134345454 - MLT2D LTR ERVL 0 414 358 223 192 19 0 chr2 116342403 116342455 -134345399 + GA-rich Low_complexity Low_complexity 2 54 0 1628 165 28 35 chr2 116342515 116342800 -134345054 + AluJo SINE Alu 1 283 -29 41 58 0 0 chr2 116342809 116342878 -134344976 + AT_rich Low_complexity Low_complexity 1 69 0 1522 199 44 0 chr2 116342878 116343174 -134344680 - MLT2D LTR ERVL -105 309 1 469 308 0 8 chr2 116343175 116343308 -134344546 - L2 LINE L2 -969 2345 2214 1651 159 80 38 chr2 116343319 116343658 -134344196 - MSTB LTR MaLR -73 353 1 21 0 0 0 chr2 116343822 116343843 -134344011 + AT_rich Low_complexity Low_complexity 1 21 0 815 231 91 0 chr2 116345193 116345401 -134342453 - Zaphod DNA AcHobo -3345 686 460 2326 105 0 0 chr2 116345617 116345922 -134341932 + AluSc SINE Alu 1 305 -4 465 208 106 33 chr2 116347006 116347345 -134340509 - MER33 DNA MER1_type -3 360 25 23 54 0 0 chr2 116348413 116348450 -134339404 + AT_rich Low_complexity Low_complexity 1 37 0 24 67 0 0 chr2 116348656 116348701 -134339153 + AT_rich Low_complexity Low_complexity 1 45 0 1949 196 64 0 chr2 116349723 116350096 -134337758 - MSTB LTR MaLR 0 426 30 335 140 0 0 chr2 116350096 116350146 -134337708 - MSTB LTR MaLR -347 79 30 335 140 0 0 chr2 116350145 116350195 -134337659 - MSTB LTR MaLR -346 80 31 345 137 0 0 chr2 116350195 116350246 -134337608 - MSTB LTR MaLR -346 80 30 324 143 0 0 chr2 116350246 116350295 -134337559 - MSTB LTR MaLR -347 79 31 345 137 0 0 chr2 116350295 116350346 -134337508 - MSTB LTR MaLR -346 80 30 312 146 0 0 chr2 116350346 116350394 -134337460 - MSTB LTR MaLR -347 79 32 305 140 20 0 chr2 116350394 116350444 -134337410 - MSTB LTR MaLR -345 81 31 345 137 0 0 chr2 116350444 116350495 -134337359 - MSTB LTR MaLR -346 80 30 324 143 0 0 chr2 116350495 116350544 -134337310 - MSTB LTR MaLR -347 79 31 345 137 0 0 chr2 116350544 116350595 -134337259 - MSTB LTR MaLR -346 80 30 315 163 0 0 chr2 116350595 116350644 -134337210 - MSTB LTR MaLR -347 79 31 355 135 0 0 chr2 116350644 116350696 -134337158 - MSTB LTR MaLR -346 80 29 450 118 26 13 chr2 116350697 116350773 -134337081 - MSTB LTR MaLR -349 77 1 8411 173 50 11 chr2 116350773 116352361 -134335493 - MSTA-int LTR MaLR 0 1651 1 1539 176 127 12 chr2 116352361 116352700 -134335154 - MSTA LTR MaLR 0 428 51 1604 113 5 0 chr2 116352700 116352921 -134334933 - LTR10C LTR ERV1 0 591 370 411 19 0 38 chr2 116352920 116352973 -134334881 - LTR10C LTR ERV1 -540 51 1 * 260 244 0 33 chr2 116353038 116353128 -134334726 + A-rich Low_complexity Low_complexity 4 90 0 21 0 0 0 chr2 116353152 116353173 -134334681 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr2 116353242 116353273 -134334581 + AT_rich Low_complexity Low_complexity 1 31 0 238 358 121 33 chr2 116353886 116354193 -134333661 + L3 LINE CR1 1061 1394 -183 286 280 53 67 chr2 116356429 116356579 -134331275 + MIR3 SINE MIR 52 199 -9 369 0 0 0 chr2 116356684 116356725 -134331129 + (TG)n Simple_repeat Simple_repeat 2 42 0 808 233 68 5 chr2 116356734 116356940 -134330914 + MER20 DNA MER1_type 1 219 0 263 316 0 0 chr2 116357428 116357504 -134330350 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 181 391 73 0 chr2 116358358 116358468 -134329386 - L2 LINE L2 -5 3267 3150 21 0 0 0 chr2 116358547 116358568 -134329286 + AT_rich Low_complexity Low_complexity 1 21 0 5096 153 33 38 chr2 116358570 116360004 -134327850 - L1MA4 LINE L1 -4 6296 4866 183 368 18 0 chr2 116361107 116361164 -134326690 - L3 LINE CR1 -4 1573 1516 2531 177 51 62 chr2 116362141 116362750 -134325104 + L1MB4 LINE L1 5376 5977 -203 937 239 9 0 chr2 116363296 116363526 -134324328 + L1MB4 LINE L1 5948 6179 -1 216 67 0 0 chr2 116364170 116364200 -134323654 + (TG)n Simple_repeat Simple_repeat 1 30 0 2075 183 39 90 chr2 116364509 116365158 -134322696 - LTR6A LTR ERV1 0 564 1 340 138 17 35 chr2 116365619 116365677 -134322177 + MER33 DNA MER1_type 7 63 -261 2192 117 7 0 chr2 116365829 116366136 -134321718 - AluSc SINE Alu 0 309 1 351 44 0 0 chr2 116366374 116366419 -134321435 + (TG)n Simple_repeat Simple_repeat 2 46 0 816 239 33 0 chr2 116367648 116367828 -134320026 + MER5A DNA MER1_type 4 189 0 1078 174 42 0 chr2 116367836 116368026 -134319828 - MER20 DNA MER1_type 0 219 22 1882 148 61 17 chr2 116368930 116369289 -134318565 + THE1C LTR MaLR 1 375 0 8872 125 39 82 chr2 116369291 116370447 -134317407 + THE1C-int LTR MaLR 3 1068 -512 3210 145 39 2 chr2 116370447 116371006 -134316848 - LTR19B LTR ERV1 0 580 1 8872 125 39 82 chr2 116371006 116371498 -134316356 + THE1C-int LTR MaLR 1068 1580 0 1805 167 49 25 chr2 116371498 116371864 -134315990 + THE1C LTR MaLR 1 375 0 21 82 0 0 chr2 116372665 116372714 -134315140 + AT_rich Low_complexity Low_complexity 1 49 0 555 265 239 8 chr2 116372782 116373042 -134314812 + L2 LINE L2 2994 3313 0 181 379 30 61 chr2 116373941 116374073 -134313781 - MIR SINE MIR -60 148 21 1438 199 81 26 chr2 116374077 116374424 -134313430 - MER47A DNA MER2_type 0 366 1 285 312 88 8 chr2 116374992 116375117 -134312737 - MIR SINE MIR -105 157 23 23 54 0 0 chr2 116375757 116375794 -134312060 + AT_rich Low_complexity Low_complexity 1 37 0 192 135 0 0 chr2 116375893 116375930 -134311924 + (TG)n Simple_repeat Simple_repeat 2 38 0 394 349 74 0 chr2 116375964 116376139 -134311715 - MIR3 SINE MIR -15 193 6 2947 280 88 48 chr2 116377460 116379382 -134308472 + L1ME1 LINE L1 2782 4879 -1299 6615 72 9 10 chr2 116379382 116380990 -134306864 + L1PA7 LINE L1 4548 6154 0 2947 280 88 48 chr2 116380990 116382141 -134305713 + L1ME1 LINE L1 4879 5983 -195 2097 125 0 0 chr2 116383170 116383466 -134304388 - AluSx SINE Alu -16 296 1 234 0 0 0 chr2 116383935 116383961 -134303893 + (TA)n Simple_repeat Simple_repeat 1 26 0 414 245 14 29 chr2 116385268 116385407 -134302447 + L1ME1 LINE L1 6021 6157 -9 1443 151 34 24 chr2 116385415 116385707 -134302147 + L1MA9 LINE L1 6009 6303 -9 333 397 38 3 chr2 116386091 116386381 -134301473 + L2 LINE L2 2319 2618 -696 1721 179 13 7 chr2 116386747 116387055 -134300799 - AluSx SINE Alu -2 310 1 24 0 0 0 chr2 116387055 116387079 -134300775 + AT_rich Low_complexity Low_complexity 1 24 0 1240 321 110 31 chr2 116388226 116388432 -134299422 - MER115 DNA AcHobo 0 693 505 194 23 68 23 chr2 116388432 116388476 -134299378 + A-rich Low_complexity Low_complexity 2 47 0 1240 321 110 31 chr2 116388476 116388876 -134298978 - MER115 DNA AcHobo -188 505 39 23 54 0 0 chr2 116389324 116389361 -134298493 + AT_rich Low_complexity Low_complexity 1 37 0 2172 128 3 0 chr2 116389567 116389873 -134297981 + AluSx SINE Alu 1 307 -5 312 345 47 0 chr2 116390785 116390933 -134296921 + MIR SINE MIR 63 217 -45 205 293 35 0 chr2 116391207 116391265 -134296589 + (CATG)n Simple_repeat Simple_repeat 2 61 0 2142 102 0 72 chr2 116391307 116391641 -134296213 + AluSg SINE Alu 1 310 0 497 111 16 7 chr2 116392985 116393175 -134294679 - AluSg/x SINE Alu -10 299 77 2101 102 51 0 chr2 116393643 116393937 -134293917 + AluSp SINE Alu 1 309 -4 1656 177 3 34 chr2 116395599 116395803 -134292051 - AluJb SINE Alu 0 312 120 234 0 0 0 chr2 116395803 116395829 -134292025 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1656 177 3 34 chr2 116395829 116395946 -134291908 - AluJb SINE Alu -192 120 1 22 0 0 0 chr2 116396068 116396090 -134291764 + AT_rich Low_complexity Low_complexity 1 22 0 414 273 33 47 chr2 116396174 116396324 -134291530 - MIR SINE MIR -51 211 64 736 186 165 32 chr2 116396345 116396630 -134291224 - MER33 DNA MER1_type 0 324 2 196 314 105 65 chr2 116396682 116396806 -134291048 + L2 LINE L2 3136 3264 -8 2861 186 35 13 chr2 116398487 116399024 -134288830 + MSTA-int LTR MaLR 255 803 -848 6205 193 38 2 chr2 116399025 116400139 -134287715 + MSTA-int LTR MaLR 498 1651 0 1980 186 97 5 chr2 116400139 116400531 -134287323 + MSTA LTR MaLR 1 428 0 1117 245 33 0 chr2 116400531 116400776 -134287078 - MSTA LTR MaLR -175 253 1 5361 235 25 18 chr2 116400783 116401816 -134286038 + L1MB3 LINE L1 3726 4750 -1433 2175 139 82 30 chr2 116401816 116402220 -134285634 - MSTB LTR MaLR 0 426 2 5361 235 25 18 chr2 116402220 116403626 -134284228 + L1MB3 LINE L1 4750 6182 -1 21 0 0 0 chr2 116403668 116403689 -134284165 + AT_rich Low_complexity Low_complexity 1 21 0 284 359 111 5 chr2 116404164 116404362 -134283492 + MIR SINE MIR 32 250 -12 262 233 0 55 chr2 116405573 116405646 -134282208 + MIR3 SINE MIR 125 193 -15 476 224 16 0 chr2 116405713 116405847 -134282007 - L1MB8 LINE L1 -269 5911 5777 22 35 0 0 chr2 116406193 116406222 -134281632 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr2 116406243 116406270 -134281584 + AT_rich Low_complexity Low_complexity 1 27 0 1468 213 54 35 chr2 116406322 116406827 -134281027 - L1MB7 LINE L1 -39 6145 5732 262 326 42 43 chr2 116407209 116407442 -134280412 - MIR SINE MIR -14 248 17 453 36 0 0 chr2 116407450 116407505 -134280349 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 216 167 0 0 chr2 116407505 116407541 -134280313 + (TG)n Simple_repeat Simple_repeat 2 37 0 396 324 88 41 chr2 116408443 116408761 -134279093 + MLT1K LTR MaLR 141 473 -115 1112 115 0 0 chr2 116408958 116409106 -134278748 + AluSc SINE Alu 145 292 -17 186 71 0 0 chr2 116409262 116409290 -134278564 + (A)n Simple_repeat Simple_repeat 1 28 0 21 0 0 75 chr2 116410132 116410172 -134277682 + AT_rich Low_complexity Low_complexity 1 37 0 8755 20 0 0 chr2 116411103 116412916 -134274938 + L1HS LINE L1 4342 6155 0 886 203 117 15 chr2 116413124 116413321 -134274533 - MER58A DNA MER1_type -7 217 1 3552 172 24 122 chr2 116413332 116414156 -134273698 + MER4D LTR ERV1 1 711 -192 2175 111 61 19 chr2 116414156 116414516 -134273338 - THE1C LTR MaLR 0 375 1 3552 172 24 122 chr2 116414516 116414692 -134273162 + MER4D LTR ERV1 711 903 0 23 78 0 0 chr2 116414700 116414751 -134273103 + AT_rich Low_complexity Low_complexity 1 51 0 1194 211 97 92 chr2 116414801 116414859 -134272995 - MER31B LTR ERV1 -9 457 401 1845 162 3 23 chr2 116414859 116415167 -134272687 + AluSx SINE Alu 1 302 -10 1194 211 97 92 chr2 116415167 116415351 -134272503 - MER31B LTR ERV1 -65 401 219 2071 154 47 59 chr2 116415351 116415843 -134272011 - LTR19A LTR ERV1 0 486 1 1194 211 97 92 chr2 116415843 116416054 -134271800 - MER31B LTR ERV1 -247 219 1 688 209 74 115 chr2 116416266 116416753 -134271101 - MER110A LTR ERV1 -1 467 1 38 22 0 0 chr2 116417090 116417135 -134270719 + AT_rich Low_complexity Low_complexity 1 45 0 2022 123 17 0 chr2 116417966 116418258 -134269596 - AluSc SINE Alu -6 303 7 22 35 0 0 chr2 116418901 116418930 -134268924 + AT_rich Low_complexity Low_complexity 1 29 0 752 292 55 10 chr2 116419043 116419334 -134268520 - MER110 LTR ERV1 0 491 188 180 0 0 0 chr2 116419388 116419408 -134268446 + (A)n Simple_repeat Simple_repeat 1 20 0 1924 209 72 112 chr2 116420734 116421457 -134266397 - LTR8A LTR ERV1 0 727 34 21 0 0 0 chr2 116422347 116422368 -134265486 + AT_rich Low_complexity Low_complexity 1 21 0 246 125 0 0 chr2 116422710 116422758 -134265096 + (TA)n Simple_repeat Simple_repeat 2 49 0 22 0 0 0 chr2 116426118 116426140 -134261714 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 116426275 116426303 -134261551 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 116426451 116426486 -134261368 + AT_rich Low_complexity Low_complexity 1 35 0 1442 189 7 46 chr2 116426883 116427190 -134260664 - AluJo SINE Alu -17 295 1 570 211 195 11 chr2 116427941 116428126 -134259728 + MER20 DNA MER1_type 1 219 0 35 54 0 0 chr2 116429406 116429462 -134258392 + AT_rich Low_complexity Low_complexity 1 56 0 1274 153 44 29 chr2 116429897 116430171 -134257683 + L1MA7 LINE L1 6008 6285 -6 294 247 135 22 chr2 116430591 116430680 -134257174 - MIR SINE MIR -82 126 28 269 275 18 0 chr2 116430834 116430969 -134256885 + (TA)n Simple_repeat Simple_repeat 1 137 0 354 80 0 0 chr2 116431205 116431255 -134256599 + (CA)n Simple_repeat Simple_repeat 2 51 0 303 345 0 0 chr2 116431453 116431540 -134256314 - L2 LINE L2 0 3272 3186 606 372 82 20 chr2 116431702 116432199 -134255655 - L2 LINE L2 -341 2973 2446 22 35 0 0 chr2 116432360 116432389 -134255465 + AT_rich Low_complexity Low_complexity 1 29 0 2176 123 0 0 chr2 116432810 116433112 -134254742 + AluSc SINE Alu 1 302 -7 7915 51 17 4 chr2 116433865 116435321 -134252533 - L1P2 LINE L1 -350 5804 4341 2000 180 77 79 chr2 116435381 116435795 -134252059 - LTR49 LTR ERV1 -16 565 180 1997 102 0 84 chr2 116435795 116436130 -134251724 + AluSc SINE Alu 1 307 -2 2000 180 77 79 chr2 116436130 116436308 -134251546 - LTR49 LTR ERV1 -401 180 3 11804 165 48 39 chr2 116436310 116440039 -134247815 - LTR49-int LTR ERV1 0 6331 1820 366 131 16 0 chr2 116440180 116440241 -134247613 - MER34C LTR ERV1 -369 216 155 884 276 117 17 chr2 116440242 116440584 -134247270 - LTR49-int LTR ERV1 -3716 2615 751 497 188 21 10 chr2 116440601 116440697 -134247157 - LTR49-int LTR ERV1 -4169 2162 2066 404 147 11 32 chr2 116440762 116440857 -134246997 - LTR49-int LTR ERV1 -4565 1766 1674 248 172 32 11 chr2 116440870 116440963 -134246891 + (TA)n Simple_repeat Simple_repeat 1 95 0 2252 44 0 0 chr2 116441080 116441350 -134246504 - AluY SINE Alu -41 270 1 1664 139 121 0 chr2 116441350 116441623 -134246231 - AluSx SINE Alu -6 306 1 339 358 76 62 chr2 116442178 116442533 -134245321 + L2 LINE L2 2909 3268 -4 1114 217 80 118 chr2 116443414 116443939 -134243915 + MLT1D LTR MaLR 1 505 0 279 341 7 43 chr2 116445081 116445219 -134242635 + MIR SINE MIR 37 169 -93 1833 183 10 70 chr2 116445318 116445733 -134242121 - MLT1B LTR MaLR 0 390 1 204 216 0 0 chr2 116446116 116446153 -134241701 + (CA)n Simple_repeat Simple_repeat 2 38 0 350 292 115 18 chr2 116446611 116446724 -134241130 - MER5A DNA MER1_type 0 189 66 747 231 129 18 chr2 116446768 116446993 -134240861 - MIR SINE MIR -5 257 8 186 268 0 0 chr2 116447111 116447152 -134240702 - L2 LINE L2 -19 3294 3254 321 263 0 61 chr2 116447391 116447505 -134240349 - L1MC4 LINE L1 -2 8040 7934 2266 116 52 6 chr2 116447582 116447944 -134239910 - L1PA10 LINE L1 -4 6164 5786 22 0 0 0 chr2 116448289 116448311 -134239543 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 116448520 116448542 -134239312 + AT_rich Low_complexity Low_complexity 1 22 0 720 337 107 13 chr2 116448542 116448990 -134238864 + L2 LINE L2 2819 3308 -5 232 284 12 12 chr2 116448992 116449073 -134238781 - MIR SINE MIR -118 144 64 258 331 24 65 chr2 116449365 116449578 -134238276 - MIR SINE MIR -56 206 2 3952 154 21 18 chr2 116449934 116450643 -134237211 - MER50 LTR ERV1 -23 711 1 1351 279 72 63 chr2 116451288 116451830 -134236024 - MLT1H1 LTR MaLR 0 555 9 421 279 76 10 chr2 116452134 116452331 -134235523 + MER113 DNA MER1_type? 4 213 -308 250 309 18 9 chr2 116452411 116452521 -134235333 + GA-rich Low_complexity Low_complexity 3 113 0 487 198 52 0 chr2 116452521 116452617 -134235237 + MER58C DNA MER1_type 114 214 -1 279 265 72 72 chr2 116452787 116452953 -134234901 + MLT1J1 LTR MaLR 63 228 -218 223 191 43 0 chr2 116453596 116453643 -134234211 + CT-rich Low_complexity Low_complexity 4 52 0 612 289 22 69 chr2 116453716 116454080 -134233774 - L1MC4a LINE L1 -1755 6053 5707 2044 119 0 14 chr2 116454086 116454372 -134233482 + AluSx SINE Alu 1 282 -30 521 302 0 19 chr2 116454490 116454649 -134233205 - L1MC4a LINE L1 -2155 5653 5498 212 0 36 0 chr2 116454713 116454741 -134233113 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 21 57 0 0 chr2 116454894 116454929 -134232925 + AT_rich Low_complexity Low_complexity 1 35 0 390 228 50 0 chr2 116454929 116455030 -134232824 - L1MA9 LINE L1 -22 6290 6185 1177 111 29 143 chr2 116455037 116455139 -134232715 - L1MA9 LINE L1 -231 6081 5969 2035 78 0 4 chr2 116455139 116455409 -134232445 - AluY SINE Alu -8 303 35 1177 111 29 143 chr2 116455409 116455585 -134232269 - L1MA9 LINE L1 -343 5969 5835 943 133 0 105 chr2 116455581 116455791 -134232063 + L1MA9 LINE L1 5657 5844 -468 * 280 290 23 8 chr2 116455782 116455913 -134231941 - L1MC4a LINE L1 -2421 5387 5255 * 21 0 0 0 chr2 116456438 116456459 -134231395 + AT_rich Low_complexity Low_complexity 1 21 0 434 368 82 26 chr2 116457322 116457700 -134230154 + L3 LINE CR1 417 815 -762 306 0 0 0 chr2 116458197 116458231 -134229623 + (TTA)n Simple_repeat Simple_repeat 3 36 0 1202 59 0 0 chr2 116458231 116458383 -134229471 - L1PA5 LINE L1 -18 6136 5985 567 168 35 56 chr2 116458506 116458649 -134229205 - MER83B-int LTR ERV1 -2686 2194 2055 1320 282 77 62 chr2 116458722 116461181 -134226673 - L1ME LINE L1 -3571 2509 26 204 333 125 14 chr2 116462043 116462187 -134225667 - L3 LINE CR1 -452 1125 966 1920 116 3 40 chr2 116462554 116462857 -134224997 - AluSc SINE Alu -17 292 1 186 388 19 0 chr2 116462860 116462963 -134224891 + MIR3 SINE MIR 83 187 -21 22 0 0 0 chr2 116463375 116463397 -134224457 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr2 116463784 116463826 -134224028 + AT_rich Low_complexity Low_complexity 1 42 0 423 0 0 0 chr2 116463999 116464046 -134223808 + (TG)n Simple_repeat Simple_repeat 2 48 0 183 42 0 0 chr2 116464437 116464461 -134223393 + (T)n Simple_repeat Simple_repeat 1 24 0 243 0 0 0 chr2 116464957 116464984 -134222870 + (T)n Simple_repeat Simple_repeat 1 27 0 567 326 69 64 chr2 116467944 116468463 -134219391 + L3 LINE CR1 525 1046 -531 195 266 98 56 chr2 116468476 116468619 -134219235 + L2 LINE L2 3127 3275 -38 1769 181 0 7 chr2 116468984 116469315 -134218539 + AluSx SINE Alu 1 312 0 396 314 51 7 chr2 116469464 116469601 -134218253 + HAL1 LINE L1 742 884 -1623 1130 256 114 92 chr2 116469932 116470837 -134217017 + HAL1 LINE L1 1388 2312 -195 1544 255 70 25 chr2 116470847 116471360 -134216494 - MLT1F LTR MaLR -6 536 1 216 0 0 0 chr2 116471370 116471394 -134216460 + (TG)n Simple_repeat Simple_repeat 2 25 0 257 298 63 89 chr2 116472385 116472543 -134215311 + MIR3 SINE MIR 23 176 -32 553 264 26 26 chr2 116473261 116473416 -134214438 + MIR SINE MIR 21 175 -87 761 306 153 16 chr2 116474378 116474810 -134213044 - LTR16C LTR ERVL 0 491 1 1796 128 75 0 chr2 116475083 116475365 -134212489 - AluSx SINE Alu -9 303 1 25 0 0 0 chr2 116475628 116475653 -134212201 + AT_rich Low_complexity Low_complexity 1 25 0 27 0 0 0 chr2 116476252 116476279 -134211575 + AT_rich Low_complexity Low_complexity 1 27 0 353 279 34 34 chr2 116476916 116477063 -134210791 - MIR SINE MIR -44 218 72 294 312 11 79 chr2 116477241 116477430 -134210424 + L2 LINE L2 1922 2097 -1217 37 23 0 0 chr2 116477722 116477766 -134210088 + AT_rich Low_complexity Low_complexity 1 44 0 514 172 11 21 chr2 116477823 116477916 -134209938 - Tigger7 DNA MER2_type 0 2487 2396 302 198 9 26 chr2 116477918 116478034 -134209820 + (TA)n Simple_repeat Simple_repeat 1 114 0 27 0 0 0 chr2 116478072 116478099 -134209755 + AT_rich Low_complexity Low_complexity 1 27 0 1883 165 28 3 chr2 116478131 116478458 -134209396 + MER7A DNA MER2_type 14 346 0 1434 158 24 0 chr2 116478461 116478715 -134209139 - Tigger7 DNA MER2_type -90 2397 2138 577 156 83 0 chr2 116478712 116478821 -134209033 - Tigger7 DNA MER2_type -615 118 1 * 181 328 78 8 chr2 116479016 116479144 -134208710 - L2 LINE L2 -251 3062 2926 267 276 149 0 chr2 116479348 116479435 -134208419 + MER91C DNA MER1_type 4 103 -37 1629 94 153 0 chr2 116479779 116480034 -134207820 - AluY SINE Alu -7 294 1 320 283 11 11 chr2 116481454 116481546 -134206308 + MER94 DNA DNA 2 93 -41 2066 104 7 3 chr2 116482330 116482637 -134205217 - AluSq SINE Alu 0 313 1 1811 192 35 50 chr2 116482649 116483133 -134204721 - L1MB8 LINE L1 -1 6246 5770 201 94 0 0 chr2 116483160 116483192 -134204662 + (T)n Simple_repeat Simple_repeat 1 32 0 2884 250 73 11 chr2 116483320 116484402 -134203452 - L1MB8 LINE L1 -743 5472 4336 947 303 87 25 chr2 116484408 116485052 -134202802 - L1MB8 LINE L1 -2421 3794 3111 1609 181 7 19 chr2 116485097 116485406 -134202448 - AluJb SINE Alu -1 311 7 246 207 0 0 chr2 116485410 116485468 -134202386 + CT-rich Low_complexity Low_complexity 4 61 0 1419 221 16 0 chr2 116485471 116485778 -134202076 - AluJo SINE Alu 0 312 1 293 138 0 17 chr2 116485819 116485877 -134201977 + (TTTC)n Simple_repeat Simple_repeat 4 60 0 2576 282 47 35 chr2 116485889 116487761 -134200093 - L1MB8 LINE L1 -3114 3101 1259 23 0 0 0 chr2 116487846 116487869 -134199985 + AT_rich Low_complexity Low_complexity 1 23 0 821 269 0 0 chr2 116487963 116488171 -134199683 - MER3 DNA MER1_type -1 208 1 219 188 0 0 chr2 116488328 116488376 -134199478 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 366 296 99 43 chr2 116488587 116488911 -134198943 - L1MC/D LINE L1 -2139 5669 5328 436 338 78 14 chr2 116490193 116490554 -134197300 + L1ME LINE L1 5319 5702 -468 2462 170 26 2 chr2 116491215 116491632 -134196222 - MSTB1 LTR MaLR -5 427 1 28 48 0 0 chr2 116492022 116492064 -134195790 + AT_rich Low_complexity Low_complexity 1 42 0 2058 97 0 4 chr2 116493417 116493696 -134194158 + AluSg SINE Alu 1 278 -32 189 0 0 0 chr2 116493698 116493719 -134194135 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 205 298 68 77 chr2 116494735 116494983 -134192871 + L2 LINE L2 2256 2501 -813 22 56 0 0 chr2 116495448 116495484 -134192370 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr2 116496779 116496804 -134191050 + (A)n Simple_repeat Simple_repeat 1 25 0 1424 267 58 50 chr2 116497491 116498090 -134189764 - MER21B LTR ERV1 -124 739 136 529 213 11 0 chr2 116498185 116498279 -134189575 - MER21B LTR ERV1 -767 96 2 212 77 26 0 chr2 116498348 116498387 -134189467 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 23 0 0 0 chr2 116499000 116499023 -134188831 + AT_rich Low_complexity Low_complexity 1 23 0 1529 180 79 75 chr2 116500517 116501355 -134186499 + L1MD1 LINE L1 4749 5606 -636 1651 66 19 0 chr2 116501355 116501567 -134186287 - L1P2 LINE L1 -406 5748 5533 255 0 0 0 chr2 116501556 116501586 -134186268 + L1P1 LINE L1 5747 5776 -379 * 1301 35 6 12 chr2 116501586 116501781 -134186073 + L1PA5 LINE L1 5987 6154 0 2496 193 33 70 chr2 116501832 116502507 -134185347 + L1MD1 LINE L1 5593 6242 0 1626 144 70 0 chr2 116502575 116502832 -134185022 - AluSq SINE Alu -36 277 3 22 70 0 0 chr2 116502841 116502884 -134184970 + AT_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr2 116503376 116503412 -134184442 + AT_rich Low_complexity Low_complexity 1 36 0 24 67 0 0 chr2 116503539 116503584 -134184270 + AT_rich Low_complexity Low_complexity 1 45 0 1444 140 9 9 chr2 116503850 116504104 -134183750 + AluSg/x SINE Alu 72 325 0 696 233 28 17 chr2 116504110 116504286 -134183568 - MER5B DNA MER1_type 0 178 1 648 216 105 0 chr2 116504552 116504723 -134183131 + MER5A DNA MER1_type 1 189 0 810 237 154 35 chr2 116505043 116505414 -134182440 - L1ME3A LINE L1 -5 6165 5751 298 271 78 23 chr2 116505643 116505772 -134182082 - MIR SINE MIR -121 141 6 25 51 0 0 chr2 116506405 116506444 -134181410 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr2 116507468 116507492 -134180362 + AT_rich Low_complexity Low_complexity 1 24 0 9767 28 0 0 chr2 116507492 116509425 -134178429 - L1PA3 LINE L1 -1 6154 4223 503 270 107 50 chr2 116509458 116509998 -134177856 - L1ME4a LINE L1 -18 6103 5533 1178 299 58 9 chr2 116511087 116511549 -134176305 - MLT1F LTR MaLR -39 503 19 387 344 63 52 chr2 116511631 116512151 -134175703 + L3 LINE CR1 493 1018 -559 1077 179 91 27 chr2 116512157 116512453 -134175401 + MER33 DNA MER1_type 10 324 0 518 314 75 48 chr2 116512579 116512913 -134174941 + L3 LINE CR1 1189 1531 -46 180 302 48 16 chr2 116513755 116513818 -134174036 + L2 LINE L2 3208 3272 0 371 274 0 9 chr2 116514633 116514739 -134173115 - L1ME3A LINE L1 -355 5766 5662 227 182 0 0 chr2 116514836 116514880 -134172974 + (TG)n Simple_repeat Simple_repeat 1 44 0 265 337 74 0 chr2 116514927 116515022 -134172832 - MIR SINE MIR -67 141 40 513 255 76 49 chr2 116515082 116515266 -134172588 - L2 LINE L2 -4 3309 3121 1259 254 77 56 chr2 116515303 116515822 -134172032 - L1MD2 LINE L1 -30 6329 5800 430 318 195 14 chr2 116515834 116516131 -134171723 - L2 LINE L2 -197 3116 2778 191 347 42 0 chr2 116518914 116518986 -134168868 - L2 LINE L2 -327 2945 2871 1662 175 31 0 chr2 116520873 116521164 -134166690 + AluJb SINE Alu 1 300 -12 473 359 72 34 chr2 116522753 116523224 -134164630 + L2 LINE L2 2369 2857 -457 529 267 24 115 chr2 116524264 116524594 -134163260 + MER102b DNA MER1_type 33 332 -9 258 258 0 15 chr2 116525553 116525619 -134162235 - MLT1L LTR MaLR -425 190 126 22 0 0 0 chr2 116526015 116526037 -134161817 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 116526104 116526126 -134161728 + AT_rich Low_complexity Low_complexity 1 22 0 369 0 0 0 chr2 116527383 116527424 -134160430 + (CA)n Simple_repeat Simple_repeat 1 41 0 587 277 113 45 chr2 116528680 116529103 -134158751 - MER34 LTR ERV1 -90 452 1 1457 126 13 17 chr2 116529631 116529862 -134157992 - MER30 DNA MER1_type 0 230 1 186 43 0 0 chr2 116530535 116530558 -134157296 + (TC)n Simple_repeat Simple_repeat 2 24 0 197 355 116 17 chr2 116531802 116531974 -134155880 - MER5A DNA MER1_type 0 189 1 26 0 0 0 chr2 116532938 116532964 -134154890 + AT_rich Low_complexity Low_complexity 1 26 0 2273 54 0 4 chr2 116533504 116533781 -134154073 + AluY SINE Alu 36 311 0 24 0 0 0 chr2 116533801 116533825 -134154029 + AT_rich Low_complexity Low_complexity 1 24 0 630 140 0 0 chr2 116534077 116534177 -134153677 - AluJb SINE Alu -15 297 198 2206 94 3 35 chr2 116534526 116534844 -134153010 + AluSx SINE Alu 1 308 -4 1083 355 93 18 chr2 116535331 116536130 -134151724 + L2 LINE L2 253 1111 -2203 216 299 0 30 chr2 116537004 116537071 -134150783 + MIR SINE MIR 50 114 -148 223 140 18 53 chr2 116537692 116537749 -134150105 + T-rich Low_complexity Low_complexity 6 60 0 232 295 0 0 chr2 116537985 116538046 -134149808 - L1ME LINE L1 -299 5822 5762 205 189 0 0 chr2 116538589 116538626 -134149228 + (TATG)n Simple_repeat Simple_repeat 2 38 0 2943 257 140 36 chr2 116538664 116539233 -134148621 - L1MD3 LINE L1 -7 8035 7527 2097 128 0 6 chr2 116539233 116539545 -134148309 - AluSx SINE Alu 0 312 3 2943 257 140 36 chr2 116539545 116539876 -134147978 - L1MD3 LINE L1 -515 7527 7232 210 118 0 0 chr2 116539876 116539910 -134147944 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 2943 257 140 36 chr2 116539910 116540518 -134147336 - L1MD3 LINE L1 -810 7232 6373 2107 271 49 31 chr2 116540626 116541362 -134146492 - L1MC4a LINE L1 -1611 6197 5476 2192 87 0 10 chr2 116541362 116541662 -134146192 + AluSx SINE Alu 10 306 -6 2089 118 0 0 chr2 116541664 116541960 -134145894 + AluSc SINE Alu 3 298 -11 2107 271 49 31 chr2 116541960 116542101 -134145753 - L1MC4a LINE L1 -2332 5476 5301 402 346 43 6 chr2 116542532 116542694 -134145160 - MIR SINE MIR -80 182 15 23 68 0 0 chr2 116542901 116542945 -134144909 + AT_rich Low_complexity Low_complexity 1 44 0 1837 141 13 3 chr2 116544686 116544991 -134142863 - L1PA16 LINE L1 -3 6163 5856 227 198 89 30 chr2 116545160 116545261 -134142593 - L1ME4a LINE L1 0 6121 6015 207 0 0 0 chr2 116545308 116545331 -134142523 + (TG)n Simple_repeat Simple_repeat 2 24 0 274 272 18 35 chr2 116545919 116546033 -134141821 + (TATATG)n Simple_repeat Simple_repeat 2 113 0 453 202 0 0 chr2 116647261 116647355 -134040499 - L1MA9 LINE L1 -3 6309 6216 578 165 9 184 chr2 116648558 116648703 -134039151 - MER5A DNA MER1_type 0 189 20 2228 77 9 52 chr2 116648703 116649028 -134038826 - AluSp SINE Alu -2 311 1 578 165 9 184 chr2 116649028 116649078 -134038776 - MER5A DNA MER1_type -169 20 32 2064 171 3 27 chr2 116649078 116649452 -134038402 - MLT1A1 LTR MaLR 0 365 1 578 165 9 184 chr2 116649452 116649473 -134038381 - MER5A DNA MER1_type -156 33 10 30 27 0 0 chr2 116649638 116649675 -134038179 + AT_rich Low_complexity Low_complexity 1 37 0 2061 128 0 3 chr2 116650293 116650591 -134037263 - AluSg SINE Alu -13 297 1 1478 192 19 35 chr2 116650832 116651145 -134036709 - AluJo SINE Alu -1 311 4 225 83 0 0 chr2 116651147 116651183 -134036671 + (A)n Simple_repeat Simple_repeat 1 36 0 32 26 0 0 chr2 116651197 116651236 -134036618 + AT_rich Low_complexity Low_complexity 1 39 0 200 241 76 76 chr2 116652343 116652422 -134035432 + L2 LINE L2 3179 3257 -15 951 87 0 22 chr2 116652987 116653125 -134034729 - LTR19A LTR ERV1 0 486 352 1262 213 73 14 chr2 116653907 116654194 -134033660 - AluJo SINE Alu -6 306 3 256 317 0 0 chr2 116655298 116655358 -134032496 - L3 LINE CR1 -3 1574 1515 234 0 0 0 chr2 116655814 116655840 -134032014 + (A)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr2 116655942 116655966 -134031888 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1909 118 0 4 chr2 116655966 116656238 -134031616 - AluSx SINE Alu -41 271 1 24 0 0 0 chr2 116656285 116656309 -134031545 + AT_rich Low_complexity Low_complexity 1 24 0 2123 88 44 7 chr2 116656586 116656883 -134030971 + AluYa5 SINE Alu 4 311 0 959 309 90 73 chr2 116656892 116657104 -134030750 - L2 LINE L2 -1209 2105 1898 1512 176 57 69 chr2 116657104 116657541 -134030313 + MSTB1 LTR MaLR 1 432 0 959 309 90 73 chr2 116657541 116657648 -134030206 - L2 LINE L2 -1416 1898 1794 2088 145 0 0 chr2 116657648 116657959 -134029895 + AluSq SINE Alu 1 311 -2 959 309 90 73 chr2 116657959 116658347 -134029507 - L2 LINE L2 -1520 1794 1385 216 327 59 30 chr2 116658362 116658564 -134029290 - L2 LINE L2 -2175 1139 932 240 111 0 0 chr2 116658672 116658708 -134029146 + (TTA)n Simple_repeat Simple_repeat 2 37 0 530 259 36 0 chr2 116658745 116658857 -134028997 + MER5A DNA MER1_type 11 126 -63 215 282 155 14 chr2 116659276 116659418 -134028436 + L2 LINE L2 3150 3311 -2 517 241 17 0 chr2 116660491 116660607 -134027247 + MLT1J2 LTR MaLR 45 162 -288 1747 182 55 0 chr2 116663939 116664268 -134023586 + Tigger3(Golem) DNA MER2_type 2 348 -2681 560 84 12 0 chr2 116664268 116664351 -134023503 + AluY SINE Alu 1 84 -226 2700 132 105 77 chr2 116664452 116664928 -134022926 + Tigger3(Golem) DNA MER2_type 2385 2885 -144 2005 121 37 0 chr2 116664928 116665226 -134022628 - AluSx SINE Alu -3 309 1 2700 132 105 77 chr2 116665226 116665376 -134022478 + Tigger3(Golem) DNA MER2_type 2885 3029 0 24 32 0 0 chr2 116665391 116665422 -134022432 + AT_rich Low_complexity Low_complexity 1 31 0 2152 100 7 20 chr2 116665562 116665863 -134021991 - AluSq SINE Alu -16 297 1 258 32 0 0 chr2 116666157 116666188 -134021666 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2042 139 0 0 chr2 116666190 116666470 -134021384 - AluSx SINE Alu -32 280 1 275 266 186 0 chr2 116666526 116666778 -134021076 - HAL1b LINE L1 -231 1117 819 1608 248 65 53 chr2 116666793 116667495 -134020359 - HAL1b LINE L1 -567 781 71 775 206 30 0 chr2 116668666 116668831 -134019023 + MER3 DNA MER1_type 1 123 -86 197 195 0 24 chr2 116668880 116668921 -134018933 - MER5A DNA MER1_type -148 41 2 256 295 0 0 chr2 116669259 116669320 -134018534 - MIR3 SINE MIR -7 201 141 243 0 0 0 chr2 116669776 116669803 -134018051 + (A)n Simple_repeat Simple_repeat 1 27 0 216 0 0 0 chr2 116669904 116669928 -134017926 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1922 114 0 4 chr2 116669928 116670200 -134017654 - AluSx SINE Alu -41 271 1 24 0 0 0 chr2 116670247 116670271 -134017583 + AT_rich Low_complexity Low_complexity 1 24 0 338 239 43 8 chr2 116670600 116670717 -134017137 + GA-rich Low_complexity Low_complexity 2 122 0 181 294 88 59 chr2 116670727 116670829 -134017025 - L3 LINE CR1 -1197 380 276 490 333 122 61 chr2 116670860 116671401 -134016453 + MLT1K LTR MaLR 13 586 -2 252 321 83 18 chr2 116671554 116671663 -134016191 + L2 LINE L2 3142 3257 -15 243 86 17 35 chr2 116671701 116671759 -134016095 + (TA)n Simple_repeat Simple_repeat 2 58 0 1650 191 3 0 chr2 116671812 116672094 -134015760 + AluJb SINE Alu 3 285 -27 300 280 0 0 chr2 116673168 116673243 -134014611 - MIR SINE MIR -32 230 156 195 273 40 71 chr2 116673251 116673350 -134014504 - L2 LINE L2 -340 2973 2878 44 35 0 0 chr2 116673525 116673583 -134014271 + AT_rich Low_complexity Low_complexity 1 58 0 429 20 0 0 chr2 116673628 116673678 -134014176 + (TG)n Simple_repeat Simple_repeat 1 50 0 6781 77 14 3 chr2 116673873 116674933 -134012921 - L1PA10 LINE L1 -2 6166 5109 2852 124 5 0 chr2 116674933 116675369 -134012485 + L1PA10 LINE L1 4658 5095 -1051 226 163 23 0 chr2 116675618 116675661 -134012193 + T-rich Low_complexity Low_complexity 5 48 0 200 108 0 27 chr2 116677112 116677149 -134010705 + (TG)n Simple_repeat Simple_repeat 2 37 0 21 0 0 0 chr2 116678028 116678049 -134009805 + AT_rich Low_complexity Low_complexity 1 21 0 2103 192 44 6 chr2 116678264 116678744 -134009110 - L1MA9 LINE L1 0 6312 5815 180 0 0 0 chr2 116678749 116678769 -134009085 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 264 59 0 0 chr2 116678792 116678826 -134009028 + (A)n Simple_repeat Simple_repeat 1 34 0 19793 97 2 12 chr2 116678944 116682332 -134005522 + L1PA3 LINE L1 2474 6152 -3 21 0 0 0 chr2 116682332 116682353 -134005501 + AT_rich Low_complexity Low_complexity 1 21 0 6064 58 1 1 chr2 116682361 116683130 -134004724 + L1PA5 LINE L1 5386 6154 0 6407 69 6 8 chr2 116683130 116683978 -134003876 + L1PA7 LINE L1 5293 6143 -11 13880 201 19 14 chr2 116684318 116689273 -133998581 + L1PB1 LINE L1 1167 6207 -8 914 228 104 7 chr2 116689303 116689610 -133998244 - L1MEc LINE L1 -4017 2379 2043 600 189 0 0 chr2 116689618 116689745 -133998109 - L1MA4 LINE L1 0 6300 6174 26 30 0 0 chr2 116689922 116689955 -133997899 + AT_rich Low_complexity Low_complexity 1 33 0 566 297 42 48 chr2 116690000 116690339 -133997515 + L1ME LINE L1 5487 5822 -299 1182 198 35 86 chr2 116690573 116690887 -133996967 - AluJo SINE Alu -4 298 1 1617 124 0 8 chr2 116690887 116691129 -133996725 - AluSx SINE Alu -15 297 58 23 0 0 0 chr2 116691141 116691164 -133996690 + AT_rich Low_complexity Low_complexity 1 23 0 1876 141 0 26 chr2 116691585 116691897 -133995957 - AluJb SINE Alu -8 304 1 832 300 30 17 chr2 116692712 116692949 -133994905 - MIR SINE MIR -10 252 13 575 239 0 0 chr2 116693501 116693634 -133994220 + FLAM_A SINE Alu 1 133 0 948 317 61 50 chr2 116693680 116694565 -133993289 + L2 LINE L2 2430 3312 -1 2134 109 0 29 chr2 116695757 116696070 -133991784 - AluSx SINE Alu -8 304 1 235 231 15 0 chr2 116696125 116696190 -133991664 + L1ME1 LINE L1 6096 6161 -5 261 317 0 0 chr2 116696445 116696527 -133991327 + CT-rich Low_complexity Low_complexity 4 85 0 2515 33 0 3 chr2 116696795 116697094 -133990760 - AluY SINE Alu -13 298 1 218 333 88 35 chr2 116698497 116698611 -133989243 - L2 LINE L2 -525 2789 2670 321 73 15 44 chr2 116699371 116699439 -133988415 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 5937 160 22 32 chr2 116699647 116700851 -133987003 - L1MA4 LINE L1 -461 7258 6075 1887 157 3 3 chr2 116700851 116701163 -133986691 - AluSx SINE Alu 0 312 1 5937 160 22 32 chr2 116701163 116701712 -133986142 - L1MA4 LINE L1 -1644 6075 5522 6001 227 49 21 chr2 116701716 116703952 -133983902 - L1MA4 LINE L1 -2272 5293 2847 254 147 73 0 chr2 116703951 116704019 -133983835 - L1MA4 LINE L1 -4552 2013 1941 * 784 219 74 16 chr2 116703991 116704233 -133983621 - L1MEc LINE L1 -5578 818 563 901 267 81 86 chr2 116704236 116704678 -133983176 - L1MEc LINE L1 -5917 479 40 2056 102 17 0 chr2 116704800 116705094 -133982760 - L1PA11 LINE L1 0 6174 5876 1042 74 61 31 chr2 116705094 116705257 -133982597 + L1P4 LINE L1 5496 5663 -511 21 0 0 0 chr2 116706024 116706045 -133981809 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 116706870 116706891 -133980963 + AT_rich Low_complexity Low_complexity 1 21 0 2178 103 6 13 chr2 116706926 116707238 -133980616 + AluSx SINE Alu 1 310 -2 404 304 55 32 chr2 116707368 116707588 -133980266 - MIR SINE MIR -1 261 37 230 311 160 49 chr2 116707692 116708026 -133979828 + L2 LINE L2 1608 1903 -1411 888 207 0 0 chr2 116708026 116708190 -133979664 - FRAM SINE Alu 0 166 3 230 311 160 49 chr2 116708190 116708215 -133979639 + L2 LINE L2 1903 1924 -1390 2282 108 3 0 chr2 116708215 116708522 -133979332 - AluSc SINE Alu -1 308 1 230 311 160 49 chr2 116708522 116708880 -133978974 + L2 LINE L2 1924 2406 -908 271 227 15 0 chr2 116708942 116709008 -133978846 + MIR SINE MIR 191 257 -5 317 340 88 0 chr2 116710023 116710170 -133977684 + MIR SINE MIR 103 262 0 1998 125 35 35 chr2 116710319 116710694 -133977160 - THE1C LTR MaLR 0 375 1 351 354 63 13 chr2 116711871 116712029 -133975825 + MER5A DNA MER1_type 1 166 -23 2161 76 0 24 chr2 116712568 116712904 -133974950 - AluY SINE Alu 0 329 1 603 315 39 27 chr2 116712965 116713222 -133974632 - MIR SINE MIR 0 262 3 2202 144 77 12 chr2 116714157 116714426 -133973428 + MSTA LTR MaLR 1 306 -122 2176 106 20 0 chr2 116714426 116714727 -133973127 + AluSx SINE Alu 2 308 -4 2202 144 77 12 chr2 116714727 116714859 -133972995 + MSTA LTR MaLR 306 428 0 204 135 0 0 chr2 116715583 116715620 -133972234 + (T)n Simple_repeat Simple_repeat 1 37 0 286 318 206 12 chr2 116715672 116715842 -133972012 + MIR SINE MIR 49 251 -11 1700 170 10 0 chr2 116715866 116716155 -133971699 - AluSx SINE Alu -20 292 1 1387 116 5 0 chr2 116717487 116717702 -133970152 - L1MA3 LINE L1 0 6305 6090 2100 123 42 107 chr2 116717702 116717945 -133969909 - MSTA LTR MaLR -1 427 226 462 133 0 95 chr2 116717945 116718050 -133969804 - L1PA11 LINE L1 -4 6170 6076 2100 123 42 107 chr2 116718050 116718263 -133969591 - MSTA LTR MaLR -202 226 1 3235 117 10 18 chr2 116718264 116718776 -133969078 - L1MA3 LINE L1 -211 6094 5587 1583 162 27 27 chr2 116718776 116719104 -133968750 - L1M1 LINE L1 -4689 2876 2549 * 1980 182 17 6 chr2 116719103 116719454 -133968400 - L1M1 LINE L1 -7191 374 20 336 24 0 0 chr2 116719586 116719627 -133968227 + (TG)n Simple_repeat Simple_repeat 2 42 0 32 26 0 0 chr2 116720443 116720482 -133967372 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr2 116720520 116720548 -133967306 + AT_rich Low_complexity Low_complexity 1 28 0 636 356 61 11 chr2 116721974 116722336 -133965518 + L2 LINE L2 2487 2866 -448 23 33 0 0 chr2 116722701 116722731 -133965123 + AT_rich Low_complexity Low_complexity 1 30 0 196 245 0 20 chr2 116722954 116723003 -133964851 - MIR SINE MIR -15 247 200 4112 243 45 39 chr2 116723733 116725052 -133962802 + L1MB5 LINE L1 11 1337 -5205 699 185 56 60 chr2 116725086 116725335 -133962519 + L1MB5 LINE L1 1916 2163 -4483 1217 169 73 22 chr2 116725403 116725676 -133962178 + L1MA9 LINE L1 6026 6312 0 4021 224 26 6 chr2 116725696 116726359 -133961495 + L1MB5 LINE L1 5316 5964 -708 2274 108 0 0 chr2 116726359 116726664 -133961190 + AluSx SINE Alu 1 305 -7 4021 224 26 6 chr2 116726664 116727295 -133960559 + L1MB5 LINE L1 5964 6636 -36 28 29 0 0 chr2 116728490 116728525 -133959329 + AT_rich Low_complexity Low_complexity 1 35 0 196 347 57 32 chr2 116728722 116728846 -133959008 + MIR3 SINE MIR 50 176 -32 193 298 86 66 chr2 116729089 116729240 -133958614 - L2 LINE L2 -245 3068 2915 22 0 0 0 chr2 116729357 116729379 -133958475 + AT_rich Low_complexity Low_complexity 1 22 0 237 65 0 0 chr2 116729734 116729765 -133958089 + (TG)n Simple_repeat Simple_repeat 2 32 0 2193 221 23 30 chr2 116730274 116730342 -133957512 + L1M4 LINE L1 3347 3414 -3230 2399 63 0 10 chr2 116730342 116730644 -133957210 - AluY SINE Alu -12 299 1 2193 221 23 30 chr2 116730644 116731268 -133956586 + L1M4 LINE L1 3414 4034 -2610 3127 83 153 4 chr2 116731268 116731750 -133956104 - MER41A LTR ERV1 0 554 1 8589 181 21 21 chr2 116731750 116734245 -133953609 + L1MA7 LINE L1 4031 6525 -264 3059 109 5 0 chr2 116734245 116734676 -133953178 - MER57B LTR ERV1 0 434 2 8589 181 21 21 chr2 116734676 116734941 -133952913 + L1MA7 LINE L1 6525 6789 0 820 114 8 0 chr2 116735313 116735436 -133952418 - AluSg/x SINE Alu -5 307 184 2992 209 26 4 chr2 116735444 116736206 -133951648 - L1MB8 LINE L1 -9 6169 5279 180 0 0 0 chr2 116736628 116736648 -133951206 + (TA)n Simple_repeat Simple_repeat 1 20 0 2384 102 3 9 chr2 116737300 116737615 -133950239 - AluSp SINE Alu 0 313 1 273 109 0 0 chr2 116737687 116737733 -133950121 + (TG)n Simple_repeat Simple_repeat 1 46 0 203 158 0 0 chr2 116737836 116737874 -133949980 + (TG)n Simple_repeat Simple_repeat 1 38 0 221 319 97 0 chr2 116737902 116737974 -133949880 + L2 LINE L2 3169 3247 -25 1904 116 0 0 chr2 116737974 116738242 -133949612 + AluSx SINE Alu 42 309 -3 1150 293 126 15 chr2 116740522 116741388 -133946466 - L2 LINE L2 -1 3312 2346 231 36 0 0 chr2 116741388 116741416 -133946438 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 1972 115 7 0 chr2 116741418 116741697 -133946157 - AluSq SINE Alu -32 281 1 5590 156 35 12 chr2 116741809 116743327 -133944527 - L1M2 LINE L1 -551 5740 4186 357 302 32 16 chr2 116743482 116743608 -133944246 + MIR SINE MIR 2 129 -133 212 149 21 0 chr2 116743677 116743724 -133944130 + (TATATG)n Simple_repeat Simple_repeat 5 52 0 1407 199 205 10 chr2 116745168 116745554 -133942300 - LOR1b LTR ERV1 0 461 1 2201 118 0 0 chr2 116746611 116746907 -133940947 - AluSx SINE Alu -16 296 1 233 371 11 0 chr2 116747070 116747159 -133940695 - MER5B DNA MER1_type -2 176 87 403 276 98 44 chr2 116747442 116747667 -133940187 + MIR SINE MIR 20 256 -6 1428 198 35 14 chr2 116747839 116748122 -133939732 - AluJo SINE Alu -13 299 11 251 329 25 19 chr2 116748143 116748301 -133939553 - MARNA DNA Mariner -42 544 386 189 342 40 13 chr2 116748326 116748402 -133939452 - L2 LINE L2 -56 3257 3180 467 286 86 82 chr2 116748453 116748966 -133938888 - L2 LINE L2 -646 2668 2154 24 32 0 0 chr2 116750003 116750034 -133937820 + AT_rich Low_complexity Low_complexity 1 31 0 514 275 85 47 chr2 116750447 116750855 -133936999 - L1ME3A LINE L1 -280 5890 5466 30 69 0 0 chr2 116751113 116751171 -133936683 + AT_rich Low_complexity Low_complexity 1 58 0 189 262 24 0 chr2 116751422 116751464 -133936390 - MIR SINE MIR -85 123 81 2284 64 47 0 chr2 116752923 116753219 -133934635 + AluY SINE Alu 1 310 -1 2032 141 0 0 chr2 116753851 116754142 -133933712 - AluSq SINE Alu -22 291 1 483 295 80 52 chr2 116754526 116755395 -133932459 - L1MEd LINE L1 -4512 1617 802 188 314 113 57 chr2 116756038 116756162 -133931692 + L2 LINE L2 349 479 -2835 642 329 108 19 chr2 116756300 116756726 -133931128 + MLT1H LTR MaLR 71 534 -15 270 365 76 38 chr2 116756746 116757248 -133930606 + L2 LINE L2 1864 2384 -930 210 436 8 0 chr2 116757368 116757485 -133930369 + L2 LINE L2 2573 2690 -624 489 205 1 4 chr2 116757694 116757796 -133930058 - MER67A LTR ERV1 0 543 453 234 376 99 0 chr2 116757968 116758069 -133929785 + L2 LINE L2 3122 3232 -40 213 154 0 0 chr2 116759127 116759166 -133928688 + (TG)n Simple_repeat Simple_repeat 2 40 0 1457 82 58 5 chr2 116759684 116759890 -133927964 + MER4E LTR ERV1 1 217 -562 22 0 0 0 chr2 116760440 116760462 -133927392 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr2 116760499 116760524 -133927330 + AT_rich Low_complexity Low_complexity 1 25 0 243 0 0 0 chr2 116762993 116763020 -133924834 + (TA)n Simple_repeat Simple_repeat 1 27 0 184 98 24 24 chr2 116763742 116763783 -133924071 + (TAGA)n Simple_repeat Simple_repeat 1 41 0 476 243 73 69 chr2 116764415 116764633 -133923221 + MLT1H LTR MaLR 118 336 -213 22 0 0 0 chr2 116765012 116765034 -133922820 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 116765919 116765942 -133921912 + AT_rich Low_complexity Low_complexity 1 23 0 2334 87 3 3 chr2 116766115 116766413 -133921441 + AluSc SINE Alu 2 299 -10 2070 119 0 14 chr2 116766637 116766932 -133920922 + AluSc SINE Alu 18 308 -1 2123 158 45 3 chr2 116767185 116767564 -133920290 - Tigger4(Zombi) DNA MER2_type -2 2729 2335 396 289 56 50 chr2 116768227 116768407 -133919447 - MLT1E2 LTR MaLR -335 291 111 479 226 16 40 chr2 116768500 116768624 -133919230 + L2 LINE L2 3193 3313 0 190 336 159 24 chr2 116768718 116769057 -133918797 + L2 LINE L2 2590 2974 -340 6466 199 15 19 chr2 116770691 116772954 -133914900 + L1PA15 LINE L1 3865 6165 0 23 33 0 0 chr2 116773261 116773291 -133914563 + AT_rich Low_complexity Low_complexity 1 30 0 1024 216 94 0 chr2 116773519 116773773 -133914081 + L1MA4 LINE L1 5913 6190 -110 * 16200 47 21 2 chr2 116773767 116776559 -133911295 + L1PA3 LINE L1 1 2915 -3231 14103 29 2 1 chr2 116776559 116779008 -133908846 + L1PA3 LINE L1 3708 6155 0 1152 67 0 0 chr2 116779051 116779201 -133908653 + L1PA7 LINE L1 6001 6150 -4 292 192 0 27 chr2 116779201 116779274 -133908580 + L1MA4 LINE L1 6187 6257 -43 24 67 0 0 chr2 116779285 116779330 -133908524 + AT_rich Low_complexity Low_complexity 1 45 0 198 103 0 0 chr2 116779948 116779977 -133907877 + (TA)n Simple_repeat Simple_repeat 1 29 0 1899 238 79 18 chr2 116780430 116781051 -133906803 - L1M4 LINE L1 -3227 2919 2261 1005 176 0 6 chr2 116781064 116781246 -133906608 + L1PBa LINE L1 3 183 -6680 5969 131 159 16 chr2 116781246 116782354 -133905500 + L1PBa LINE L1 625 1890 -4973 4139 112 3 0 chr2 116782358 116782966 -133904888 - L1PBa LINE L1 -3942 2920 2311 732 120 17 0 chr2 116782965 116783082 -133904772 + L1PBa LINE L1 2919 3037 -3825 * 2468 74 94 12 chr2 116783206 116783609 -133904245 - LTR19A LTR ERV1 -50 436 1 360 284 99 70 chr2 116784539 116784782 -133903072 - MIR SINE MIR -2 260 11 231 255 0 0 chr2 116786131 116786182 -133901672 + L2 LINE L2 3263 3313 0 433 267 0 0 chr2 116787344 116787449 -133900405 - MER58 DNA MER1_type 0 2420 2316 359 273 20 20 chr2 116787459 116787558 -133900296 - MER58 DNA MER1_type -242 99 1 711 130 0 0 chr2 116788139 116788247 -133899607 - AluSg/x SINE Alu -7 302 195 525 259 53 0 chr2 116788723 116788854 -133899000 - MER58A DNA MER1_type -45 179 42 213 39 0 0 chr2 116789110 116789136 -133898718 + (CATATA)n Simple_repeat Simple_repeat 1 26 0 317 191 0 16 chr2 116789138 116789201 -133898653 - Tigger5 DNA MER2_type 0 2323 2262 282 237 0 0 chr2 116789186 116789245 -133898609 + Tigger5 DNA MER2_type 2262 2320 -3 * 273 239 30 0 chr2 116789245 116789311 -133898543 - Tigger5 DNA MER2_type -2245 78 11 870 108 0 0 chr2 116789653 116789773 -133898081 + AluSg/x SINE Alu 172 291 -19 292 319 0 0 chr2 116789773 116789864 -133897990 - L1MC4 LINE L1 -164 7878 7788 1468 205 7 4 chr2 116790232 116790510 -133897344 - AluJb SINE Alu -31 281 3 218 250 0 0 chr2 116791510 116791554 -133896300 + (TG)n Simple_repeat Simple_repeat 2 45 0 266 219 146 0 chr2 116791875 116791957 -133895897 + MIR SINE MIR 109 202 -60 21 0 0 0 chr2 116793103 116793124 -133894730 + AT_rich Low_complexity Low_complexity 1 21 0 405 211 0 13 chr2 116793318 116793394 -133894460 - L1MC/D LINE L1 -2203 5605 5531 372 243 14 28 chr2 116793413 116793557 -133894297 - L1MC/D LINE L1 -2329 5479 5338 411 83 0 0 chr2 116794005 116794065 -133893789 + (TC)n Simple_repeat Simple_repeat 2 61 0 1486 161 10 62 chr2 116794066 116794371 -133893483 - AluJb SINE Alu -23 289 1 550 256 95 68 chr2 116795371 116795782 -133892072 + Charlie8 DNA MER1_type 96 517 -1900 181 325 26 39 chr2 116796297 116796374 -133891480 + L2 LINE L2 3004 3079 -193 198 298 12 60 chr2 116796454 116796538 -133891316 + L2 LINE L2 3234 3313 0 2723 99 5 12 chr2 116797047 116797459 -133890395 - L1PB1 LINE L1 -445 5706 5298 2399 167 2 0 chr2 116797456 116797852 -133890002 + L1PB1 LINE L1 5713 6109 -42 * 636 174 33 0 chr2 116797959 116798080 -133889774 + Tigger1 DNA MER2_type 1345 1469 -949 * 3692 155 35 11 chr2 116798076 116798365 -133889489 + Tigger1 DNA MER2_type 1635 1916 -502 3192 92 22 11 chr2 116798365 116798813 -133889041 - MLT2A2 LTR ERVL 0 453 1 3692 155 35 11 chr2 116798813 116799186 -133888668 + Tigger1 DNA MER2_type 1916 2313 -105 281 98 0 0 chr2 116799188 116799229 -133888625 - L1PA7 LINE L1 -11 6143 6103 1438 79 0 0 chr2 116799342 116799520 -133888334 + AluSg/x SINE Alu 110 287 -25 1873 117 0 89 chr2 116799698 116800024 -133887830 + AluSx SINE Alu 1 297 -15 252 0 0 0 chr2 116801038 116801066 -133886788 + (CA)n Simple_repeat Simple_repeat 2 29 0 329 377 45 20 chr2 116801285 116801484 -133886370 + MIR SINE MIR 59 262 0 1552 170 67 7 chr2 116803658 116803941 -133883913 + AluJb SINE Alu 1 300 -12 2057 109 0 38 chr2 116804178 116804491 -133883363 + AluY SINE Alu 1 301 -10 573 180 31 8 chr2 116806905 116807042 -133880812 + L1P5 LINE L1 5457 5586 -570 458 178 30 10 chr2 116807032 116807133 -133880721 + L1P5 LINE L1 5485 5587 -569 * 1743 189 16 32 chr2 116807233 116807604 -133880250 - MER4D LTR ERV1 -507 365 1 384 200 0 0 chr2 116807915 116807995 -133879859 + (TATATG)n Simple_repeat Simple_repeat 3 82 0 485 141 0 0 chr2 116807996 116808067 -133879787 - Alu SINE Alu -12 298 228 346 156 0 0 chr2 116808071 116808135 -133879719 + AluSp/q SINE Alu 240 303 0 195 300 44 33 chr2 116808203 116808293 -133879561 - MIR SINE MIR -6 256 166 275 352 21 7 chr2 116808385 116808530 -133879324 - MIR SINE MIR -96 166 20 2394 67 0 3 chr2 116809148 116809446 -133878408 - AluY SINE Alu -14 297 1 997 230 14 0 chr2 116809448 116809661 -133878193 + MER92B LTR ERV1 4 219 -417 351 329 71 68 chr2 116810100 116810440 -133877414 + MER102b DNA MER1_type 1 341 0 21 0 0 0 chr2 116810985 116811006 -133876848 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr2 116811574 116811614 -133876240 + AT_rich Low_complexity Low_complexity 1 40 0 254 281 0 16 chr2 116811878 116811942 -133875912 - MIR3 SINE MIR -23 185 123 188 333 0 16 chr2 116812238 116812301 -133875553 - MER5A DNA MER1_type 0 189 128 225 361 46 19 chr2 116812662 116812770 -133875084 - MLT1L LTR MaLR -150 465 355 2090 121 0 0 chr2 116812913 116813226 -133874628 + AluSg SINE Alu 1 313 0 1637 201 56 17 chr2 116813240 116813599 -133874255 + MLT1A2 LTR MaLR 1 373 -1 788 292 10 5 chr2 116813730 116813939 -133873915 + HERV16 LTR ERVL 2712 2921 -2075 2076 120 3 0 chr2 116818183 116818526 -133869328 + AluSp SINE Alu 1 344 0 1772 184 7 0 chr2 116818777 116819076 -133868778 + AluJb SINE Alu 3 303 -9 657 140 30 135 chr2 116819219 116819349 -133868505 - MER4D LTR ERV1 -7 896 754 1786 134 35 32 chr2 116819349 116819653 -133868201 + AluSx SINE Alu 1 305 0 657 140 30 135 chr2 116819653 116819804 -133868050 - MER4D LTR ERV1 -149 754 502 666 330 107 20 chr2 116820551 116821054 -133866800 + MLT1H1 LTR MaLR 1 547 -8 836 112 11 117 chr2 116821348 116821485 -133866369 + L1MA3 LINE L1 6135 6248 -57 1320 202 3 77 chr2 116821485 116821821 -133866033 + AluJb SINE Alu 1 311 -1 836 112 11 117 chr2 116821821 116821871 -133865983 + L1MA3 LINE L1 6248 6302 -3 21 0 0 0 chr2 116821871 116821892 -133865962 + AT_rich Low_complexity Low_complexity 1 21 0 1156 263 76 16 chr2 116821920 116822300 -133865554 + L1ME1 LINE L1 5759 6161 -5 204 302 0 32 chr2 116823402 116823465 -133864389 + GA-rich Low_complexity Low_complexity 5 65 0 424 69 23 103 chr2 116824122 116824171 -133863683 - MADE1 DNA Mariner 0 80 39 1810 115 3 59 chr2 116824171 116824457 -133863397 + AluSx SINE Alu 30 299 -13 424 69 23 103 chr2 116824457 116824494 -133863360 - MADE1 DNA Mariner -41 39 1 21 36 0 0 chr2 116825140 116825168 -133862686 + AT_rich Low_complexity Low_complexity 1 28 0 3762 149 8 0 chr2 116826971 116827594 -133860260 - L1PA16 LINE L1 -2 6164 5537 551 274 0 0 chr2 116827604 116827757 -133860097 + L1P LINE L1 4834 4986 -1160 23 33 0 0 chr2 116828533 116828563 -133859291 + AT_rich Low_complexity Low_complexity 1 30 0 245 276 28 18 chr2 116828789 116828866 -133858988 - MIR SINE MIR -67 141 69 336 312 57 13 chr2 116829037 116829194 -133858660 - MIR SINE MIR -34 228 65 654 268 47 19 chr2 116829233 116829446 -133858408 - MER20 DNA MER1_type 0 219 1 2127 114 3 3 chr2 116829583 116829880 -133857974 - AluSx SINE Alu -10 302 6 387 264 126 46 chr2 116829882 116830056 -133857798 + L2 LINE L2 3109 3296 -17 267 132 94 0 chr2 116830285 116830338 -133857516 - AluY SINE Alu -159 142 85 679 325 30 10 chr2 116830338 116830636 -133857218 - HERVI LTR ERV1 -3890 3895 3592 239 156 0 31 chr2 116833848 116833912 -133853942 - AluS SINE Alu -246 62 1 1154 214 18 28 chr2 116833944 116834260 -133853594 + AluJb SINE Alu 1 313 0 2070 177 81 5 chr2 116835043 116835248 -133852606 + MSTB LTR MaLR 1 189 -237 315 0 0 0 chr2 116835248 116835283 -133852571 + (TC)n Simple_repeat Simple_repeat 1 35 0 2070 177 81 5 chr2 116835283 116835473 -133852381 + MSTB LTR MaLR 189 426 0 727 333 101 22 chr2 116835591 116836484 -133851370 + HERVL LTR ERVL 3165 4103 -1551 305 143 0 32 chr2 116836523 116836586 -133851268 + (CATA)n Simple_repeat Simple_repeat 2 62 0 189 0 0 0 chr2 116836640 116836661 -133851193 + (TG)n Simple_repeat Simple_repeat 2 22 0 1536 182 10 37 chr2 116836661 116836958 -133850896 - AluJo SINE Alu -23 289 1 423 366 5 10 chr2 116836958 116837185 -133850669 + HERVL LTR ERVL 4231 4432 -1222 1957 73 0 0 chr2 116839387 116839621 -133848233 + AluSg SINE Alu 62 295 -15 372 268 170 13 chr2 116840401 116840554 -133847300 + L2 LINE L2 2701 2877 -437 284 350 31 26 chr2 116840701 116840895 -133846959 + L2 LINE L2 2911 3105 -208 242 273 107 58 chr2 116840923 116841044 -133846810 + L2 LINE L2 3145 3271 -1 180 111 0 0 chr2 116841262 116841289 -133846565 + (TAA)n Simple_repeat Simple_repeat 3 29 0 435 324 62 89 chr2 116842187 116842523 -133845331 - L2 LINE L2 -11 3261 2935 315 259 65 53 chr2 116842590 116842760 -133845094 - L2 LINE L2 -461 2853 2682 2264 91 3 0 chr2 116842917 116843224 -133844630 - AluY SINE Alu -3 308 1 440 331 75 7 chr2 116843886 116844068 -133843786 - MIR SINE MIR -65 143 3 180 0 0 0 chr2 116844705 116844725 -133843129 + (TA)n Simple_repeat Simple_repeat 2 21 0 270 0 0 0 chr2 116845661 116845691 -133842163 + (A)n Simple_repeat Simple_repeat 1 30 0 1361 293 99 37 chr2 116845896 116846841 -133841013 - L2 LINE L2 -13 3300 2299 207 318 19 93 chr2 116846841 116846948 -133840906 - L2 LINE L2 -1987 1327 1229 375 358 64 5 chr2 116847255 116847442 -133840412 - MIR SINE MIR -10 252 55 1822 165 0 0 chr2 116847700 116848003 -133839851 - AluSx SINE Alu -2 310 8 1245 172 88 12 chr2 116848460 116848710 -133839144 - AluJo SINE Alu -9 303 35 30 59 0 0 chr2 116848839 116848890 -133838964 + AT_rich Low_complexity Low_complexity 1 51 0 230 301 203 0 chr2 116848969 116849092 -133838762 + MIR SINE MIR 98 245 -17 9825 215 33 62 chr2 116849781 116852507 -133835347 - BaEV-int LTR ERV1 -71 6578 3932 302 162 15 44 chr2 116852695 116852763 -133835091 + Tigger5 DNA MER2_type 20 85 -2238 331 244 0 13 chr2 116852809 116852887 -133834967 + Tigger5 DNA MER2_type 2244 2320 -3 228 204 0 37 chr2 116852888 116852942 -133834912 + (CATA)n Simple_repeat Simple_repeat 3 54 0 264 286 48 0 chr2 116852970 116853054 -133834800 - MIR SINE MIR -108 154 67 700 286 5 0 chr2 116853217 116853402 -133834452 - MIR SINE MIR -76 186 1 184 206 0 0 chr2 116853412 116853446 -133834408 - L2 LINE L2 -20 3252 3219 2107 84 0 0 chr2 116853647 116853921 -133833933 + AluY SINE Alu 35 308 -3 459 302 0 88 chr2 116854823 116855005 -133832849 + MIR SINE MIR 21 186 -76 277 229 33 0 chr2 116859149 116859210 -133828644 - L1ME LINE L1 -5622 448 386 2005 34 0 0 chr2 116859260 116859496 -133828358 + L1PA3 LINE L1 5917 6152 -3 3680 184 8 1 chr2 116859603 116860310 -133827544 - L1MC2 LINE L1 -242 6102 5391 405 269 192 34 chr2 116860359 116860567 -133827287 - MIR SINE MIR -10 252 12 23 0 0 0 chr2 116860837 116860860 -133826994 + AT_rich Low_complexity Low_complexity 1 23 0 1662 183 32 48 chr2 116861035 116861406 -133826448 + MLT1A1 LTR MaLR 1 365 0 200 105 18 53 chr2 116861544 116861601 -133826253 + (TA)n Simple_repeat Simple_repeat 1 55 0 423 288 131 20 chr2 116861781 116861979 -133825875 + MIR SINE MIR 43 262 0 894 166 0 0 chr2 116862576 116862743 -133825111 + AluSg/x SINE Alu 144 310 0 556 268 0 0 chr2 116863353 116863480 -133824374 - FLAM_A SINE Alu -6 127 1 667 177 114 0 chr2 116863919 116864077 -133823777 + MER3 DNA MER1_type 1 129 -80 185 0 40 0 chr2 116864197 116864222 -133823632 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 235 208 0 0 chr2 116864880 116864928 -133822926 + (CA)n Simple_repeat Simple_repeat 1 48 0 235 248 128 9 chr2 116865746 116865855 -133821999 - MIR SINE MIR -34 228 107 1189 150 34 1 chr2 116866024 116866369 -133821485 - L1P4 LINE L1 -683 5483 5130 253 363 96 14 chr2 116866616 116866762 -133821092 - MIR3 SINE MIR -7 201 44 1360 107 0 0 chr2 116866791 116866969 -133820885 - AluSg/x SINE Alu -4 308 131 214 241 37 0 chr2 116867989 116868043 -133819811 + (CATA)n Simple_repeat Simple_repeat 2 57 0 213 283 0 30 chr2 116868138 116868237 -133819617 + T-rich Low_complexity Low_complexity 3 98 0 492 160 113 9 chr2 116868504 116868610 -133819244 + FLAM_C SINE Alu 1 117 -26 2542 67 0 9 chr2 116868617 116868946 -133818908 - L1PA5 LINE L1 0 6154 5829 285 375 24 40 chr2 116869304 116869555 -133818299 - L2 LINE L2 -353 2961 2715 1553 197 24 7 chr2 116869556 116869846 -133818008 + AluJb SINE Alu 1 295 -17 207 343 40 10 chr2 116869910 116870009 -133817845 - MIR SINE MIR 0 262 161 3508 186 20 17 chr2 116870009 116870717 -133817137 + MER50 LTR ERV1 1 710 -24 2373 159 34 10 chr2 116870719 116871281 -133816573 + MER50-int LTR ERV1 1 713 -6492 852 165 90 52 chr2 116871281 116871493 -133816361 + MER50-int LTR ERV1 1302 1521 -5684 1205 194 23 99 chr2 116871570 116871915 -133815939 + MER50-int LTR ERV1 1532 1850 -5355 2524 169 10 12 chr2 116871946 116872426 -133815428 + MER50-int LTR ERV1 1003 1481 -3399 3045 157 74 19 chr2 116872428 116873294 -133814560 + MER50-int LTR ERV1 3383 4106 -804 716 203 14 0 chr2 116873334 116873482 -133814372 + MER50-int LTR ERV1 6201 6350 -855 4135 178 55 2 chr2 116873602 116874424 -133813430 + MER50-int LTR ERV1 6333 7197 -8 3573 157 38 39 chr2 116874424 116875020 -133812834 + MER50 LTR ERV1 1 597 -137 1972 154 30 7 chr2 116875020 116875142 -133812712 + AluSx SINE Alu 1 119 -193 405 0 0 0 chr2 116875142 116875187 -133812667 + (CA)n Simple_repeat Simple_repeat 2 46 0 1972 154 30 7 chr2 116875187 116875369 -133812485 + AluSx SINE Alu 119 312 0 3573 157 38 39 chr2 116875369 116875484 -133812370 + MER50 LTR ERV1 597 711 -23 512 376 8 16 chr2 116875639 116875894 -133811960 - L2 LINE L2 -698 2616 2364 820 230 0 0 chr2 116876315 116876476 -133811378 - FRAM SINE Alu -18 158 1 308 306 0 0 chr2 116877120 116877205 -133810649 + MIR3 SINE MIR 109 193 -15 261 343 20 0 chr2 116877310 116877409 -133810445 + MIR SINE MIR 51 151 -111 2162 132 7 0 chr2 116878839 116879149 -133808705 + AluSx SINE Alu 1 312 0 340 308 28 9 chr2 116879275 116879382 -133808472 - MIR SINE MIR -58 150 42 1333 56 0 0 chr2 116879999 116880159 -133807695 + AluY SINE Alu 137 296 -15 290 258 108 21 chr2 116880366 116880459 -133807395 + MIR SINE MIR 91 191 -71 915 219 90 68 chr2 116882025 116882481 -133805373 - LTR37B LTR ERV1 -2 466 1 910 209 10 30 chr2 116883420 116883469 -133804385 + MER3 DNA MER1_type 1 45 -164 235 247 60 93 chr2 116883469 116883651 -133804203 - MER3 DNA MER1_type -2 207 32 451 264 221 0 chr2 116883651 116883791 -133804063 - MER5A DNA MER1_type -12 177 7 37 39 0 0 chr2 116883995 116884046 -133803808 + AT_rich Low_complexity Low_complexity 1 51 0 213 141 42 0 chr2 116884046 116884117 -133803737 + (TA)n Simple_repeat Simple_repeat 2 75 0 2999 190 18 36 chr2 116884375 116885048 -133802806 + MER67B LTR ERV1 1 661 0 1398 238 34 75 chr2 116885619 116886270 -133801584 + L1P LINE L1 2616 3239 -2907 2103 227 59 38 chr2 116886286 116886893 -133800961 + L1MCa LINE L1 16 635 -5791 2740 249 58 11 chr2 116886893 116887927 -133799927 + L1M4 LINE L1 2667 3749 -2397 791 272 5 18 chr2 116888290 116888514 -133799340 + MER58A DNA MER1_type 1 221 -3 23 0 0 0 chr2 116888786 116888809 -133799045 + AT_rich Low_complexity Low_complexity 1 23 0 289 352 23 17 chr2 116888981 116889157 -133798697 - L2 LINE L2 -450 2864 2688 24 67 0 0 chr2 116889271 116889316 -133798538 + AT_rich Low_complexity Low_complexity 1 45 0 4754 129 1 20 chr2 116889620 116890379 -133797475 + L1P LINE L1 4024 4768 -1378 715 321 33 33 chr2 116890479 116890903 -133796951 - MER20B DNA MER1_type -326 457 34 1580 242 30 19 chr2 116890980 116891455 -133796399 + L1MD3 LINE L1 7515 7994 -1 876 130 61 0 chr2 116891460 116891591 -133796263 + AluSg/x SINE Alu 148 286 -24 292 271 0 47 chr2 116892034 116892141 -133795713 - L1ME LINE L1 -481 5640 5539 2057 132 10 3 chr2 116892652 116892962 -133794892 - AluSx SINE Alu 0 312 1 331 400 68 39 chr2 116893898 116894208 -133793646 - L2 LINE L2 -22 3250 2932 1674 114 23 171 chr2 116894357 116894708 -133793146 - L1PB4 LINE L1 -1 6155 5890 1906 161 0 0 chr2 116894708 116895000 -133792854 + AluSx SINE Alu 2 293 -19 1674 114 23 171 chr2 116895000 116895122 -133792732 - L1PB4 LINE L1 -266 5890 5752 229 365 50 25 chr2 116895122 116895281 -133792573 - MIR SINE MIR -98 164 2 23 0 0 0 chr2 116895585 116895608 -133792246 + AT_rich Low_complexity Low_complexity 1 23 0 2742 253 9 5 chr2 116896053 116896690 -133791164 - MER82 DNA MER2_type -6 647 8 222 37 0 0 chr2 116896697 116896724 -133791130 + (TC)n Simple_repeat Simple_repeat 2 28 0 264 200 0 0 chr2 116896724 116896779 -133791075 + (TA)n Simple_repeat Simple_repeat 2 56 0 2359 153 20 0 chr2 116896879 116897285 -133790569 + L1PA13 LINE L1 5744 6157 -6 22 35 0 0 chr2 116897482 116897511 -133790343 + AT_rich Low_complexity Low_complexity 1 29 0 490 321 107 5 chr2 116897559 116897783 -133790071 - MIR SINE MIR -5 257 11 430 292 103 71 chr2 116898485 116898892 -133788962 + L1ME4a LINE L1 5448 5867 -254 3268 136 0 4 chr2 116898939 116899461 -133788393 - L1PA15 LINE L1 0 6165 5646 3004 186 30 39 chr2 116899463 116900186 -133787668 - L1ME LINE L1 -744 5402 4700 22 0 0 0 chr2 116900868 116900890 -133786964 + AT_rich Low_complexity Low_complexity 1 22 0 414 236 75 70 chr2 116901236 116901435 -133786419 - L2 LINE L2 -5 3308 3109 207 0 0 0 chr2 116901455 116901478 -133786376 + (TG)n Simple_repeat Simple_repeat 1 23 0 213 311 38 30 chr2 116901616 116901748 -133786106 - L2 LINE L2 -508 2806 2674 181 368 0 0 chr2 116902718 116902786 -133785068 + MIR SINE MIR 86 153 -109 344 384 7 0 chr2 116903820 116903966 -133783888 - MIR3 SINE MIR -19 189 43 245 323 95 38 chr2 116904158 116904316 -133783538 + MER5A DNA MER1_type 18 184 -5 22 35 0 0 chr2 116904403 116904432 -133783422 + AT_rich Low_complexity Low_complexity 1 29 0 291 345 47 23 chr2 116904503 116904674 -133783180 - MIR3 SINE MIR -7 201 27 447 92 0 0 chr2 116904731 116904796 -133783058 + (CAG)n Simple_repeat Simple_repeat 1 65 0 21884 32 4 0 chr2 116904952 116908378 -133779476 - L1PA4 LINE L1 -3 6152 2716 489 208 47 0 chr2 116908381 116908487 -133779367 + MER5A DNA MER1_type 79 189 0 1874 188 127 0 chr2 116908911 116909320 -133778534 + LTR54B LTR ERV1 17 477 -21 277 348 22 11 chr2 116909334 116909426 -133778428 + MIR SINE MIR 17 109 -153 22 0 0 0 chr2 116909447 116909469 -133778385 + AT_rich Low_complexity Low_complexity 1 22 0 467 253 25 13 chr2 116909814 116909972 -133777882 - L1M4 LINE L1 -3325 2821 2662 237 225 0 70 chr2 116910361 116910432 -133777422 - MLT2D LTR ERVL -348 66 1 833 197 208 10 chr2 116911872 116912219 -133775635 + Tigger2a DNA MER2_type 2 444 0 36 23 0 0 chr2 116912564 116912607 -133775247 + AT_rich Low_complexity Low_complexity 1 43 0 1114 153 123 20 chr2 116913373 116913576 -133774278 + AluJb SINE Alu 72 295 -17 2044 125 3 0 chr2 116913611 116913898 -133773956 + AluSx SINE Alu 1 288 -24 757 235 44 30 chr2 116914049 116914328 -133773526 - MLT1B LTR MaLR 0 374 99 1844 132 37 4 chr2 116914535 116914807 -133773047 - AluSx SINE Alu -31 281 1 316 176 106 12 chr2 116914837 116914922 -133772932 - Charlie4 DNA MER1_type -1107 854 762 1551 170 24 44 chr2 116915180 116915474 -133772380 + AluJo SINE Alu 1 288 -24 338 242 8 31 chr2 116916069 116916197 -133771657 - Charlie4 DNA MER1_type -1667 294 170 1878 255 142 36 chr2 116917837 116920764 -133767090 + L1M4 LINE L1 624 4453 -2191 3538 191 41 32 chr2 116920895 116921740 -133766114 - L1 LINE L1 -1763 5085 4233 559 246 0 0 chr2 116921742 116921880 -133765974 - L1 LINE L1 -2698 4150 4013 * 7177 197 138 99 chr2 116921879 116925310 -133762544 - L1 LINE L1 -3271 3577 13 2734 188 94 3 chr2 116925326 116925902 -133761952 + MER73 LTR ERVL 16 643 -1 251 150 0 0 chr2 116927555 116927595 -133760259 + MER91 DNA MER1_type 140 179 -17 365 206 10 39 chr2 116927713 116927815 -133760039 - LTR67 LTR ERVL -2 555 457 531 320 45 4 chr2 116928610 116929124 -133758730 + ERVL LTR ERVL 4124 4633 -852 477 351 52 0 chr2 116929193 116929444 -133758410 + ERVL LTR ERVL 4762 5025 -739 321 58 39 0 chr2 116929580 116929632 -133758222 + MADE1 DNA Mariner 1 54 -26 308 43 22 0 chr2 116929667 116929713 -133758141 - MADE1 DNA Mariner -33 47 1 334 271 33 40 chr2 116930958 116931109 -133756745 + MIR SINE MIR 17 166 -96 301 268 52 88 chr2 116931246 116931440 -133756414 - MIR SINE MIR -23 239 53 2875 60 5 0 chr2 116931732 116932112 -133755742 - L1PA7 LINE L1 -85 6069 5688 1271 73 23 41 chr2 116932112 116932429 -133755425 - L1PA7 LINE L1 -721 5451 5158 606 215 8 0 chr2 116932429 116932550 -133755304 + Tigger1 DNA MER2_type 2295 2416 -2 2249 92 0 0 chr2 116932790 116933096 -133754758 + AluSg SINE Alu 1 306 0 245 238 124 57 chr2 116933579 116933684 -133754170 + MIR SINE MIR 74 185 -77 204 333 44 56 chr2 116938099 116938189 -133749665 - L2 LINE L2 -42 3271 3183 1960 172 130 3 chr2 116939330 116939708 -133748146 - MSTB LTR MaLR 0 426 1 3625 191 47 3 chr2 116939725 116940456 -133747398 - MSTB-int LTR MaLR -20 1631 869 1160 133 25 5 chr2 116940456 116940659 -133747195 - THE1C LTR MaLR 0 375 169 6609 252 97 20 chr2 116940793 116943694 -133744160 - L1PA13 LINE L1 -3685 3112 1 514 284 146 9 chr2 116943705 116944539 -133743315 - L1ME LINE L1 -679 6280 5327 674 267 31 48 chr2 116944982 116945334 -133742520 - L1ME LINE L1 -5957 466 121 322 340 69 15 chr2 116945703 116945906 -133741948 + MIR SINE MIR 20 233 -29 585 240 69 21 chr2 116947319 116947384 -133740470 - L1ME1 LINE L1 -103 6063 6003 1994 101 56 21 chr2 116947384 116947671 -133740183 - AluSg SINE Alu -13 297 1 585 240 69 21 chr2 116947671 116947838 -133740016 - L1ME1 LINE L1 -163 6003 5820 * 1775 256 166 30 chr2 116947837 116949178 -133738676 - L1ME1 LINE L1 -1414 4732 3210 550 296 0 18 chr2 116949314 116949540 -133738314 + L1MC1 LINE L1 5013 5234 -912 2746 175 79 39 chr2 116949561 116949669 -133738185 + L1MC1 LINE L1 5308 5410 -923 2025 93 4 0 chr2 116949669 116949927 -133737927 + AluSp SINE Alu 40 298 -15 2746 175 79 39 chr2 116949927 116950601 -133737253 + L1MC1 LINE L1 5410 6316 -17 3658 215 37 12 chr2 116950701 116952277 -133735577 + L1M1 LINE L1 12 1729 -5836 1847 138 48 50 chr2 116952278 116952654 -133735200 + THE1C LTR MaLR 1 375 0 8180 144 62 17 chr2 116952654 116954165 -133733689 + THE1C-int LTR MaLR 1 1579 -1 1760 150 60 44 chr2 116954168 116954535 -133733319 + THE1C LTR MaLR 3 375 0 9602 160 41 12 chr2 116954537 116956716 -133731138 + L1M1 LINE L1 1728 3971 -3594 3594 190 8 57 chr2 116956723 116956848 -133731006 + L1M1 LINE L1 4540 4670 -2895 2667 81 103 2 chr2 116956848 116957255 -133730599 + LTR7 LTR ERV1 1 448 -2 3594 190 8 57 chr2 116957255 116958087 -133729767 + L1M1 LINE L1 4670 5450 -2115 2744 85 95 5 chr2 116958087 116958498 -133729356 + LTR7 LTR ERV1 1 448 -2 2931 90 11 26 chr2 116958500 116958966 -133728888 + HERVH LTR ERV1 1 459 -7254 14055 100 11 7 chr2 116959024 116961203 -133726651 + HERVH LTR ERV1 800 2987 -4726 906 133 7 0 chr2 116961197 116961347 -133726507 + HERVH LTR ERV1 3140 3290 -4423 * 7358 125 16 5 chr2 116961337 116963040 -133724814 + HERVH LTR ERV1 3492 5233 -1858 1194 153 23 0 chr2 116963041 116963256 -133724598 + HERVH LTR ERV1 5600 5819 -1894 2097 117 48 13 chr2 116963256 116963633 -133724221 + HERVH LTR ERV1 7324 7713 0 2704 90 92 5 chr2 116963633 116964045 -133723809 + LTR7 LTR ERV1 1 448 -2 2557 199 25 6 chr2 116964050 116964679 -133723175 + L1M1 LINE L1 5449 6089 -1476 758 53 0 0 chr2 116964779 116964874 -133722980 - L1P LINE L1 -1856 4290 4196 479 276 179 34 chr2 116965694 116966509 -133721345 - HAL1 LINE L1 -871 1636 704 1509 208 62 6 chr2 116967078 116967415 -133720439 - MLT1A1 LTR MaLR 0 365 10 22 0 0 0 chr2 116967957 116967979 -133719875 + AT_rich Low_complexity Low_complexity 1 22 0 2540 198 32 6 chr2 116968173 116968704 -133719150 - MER44D DNA MER2_type 0 605 6 1967 116 7 0 chr2 116968723 116968998 -133718856 + AluSq SINE Alu 30 306 -7 2037 132 14 0 chr2 116969151 116969439 -133718415 - AluSx SINE Alu -20 292 1 265 276 13 13 chr2 116969465 116969541 -133718313 + MIR3 SINE MIR 85 160 -48 182 320 0 0 chr2 116971705 116971755 -133716099 - L3 LINE CR1 -1379 198 149 1110 220 93 19 chr2 116971877 116972200 -133715654 - MLT1C LTR MaLR 0 467 121 1382 282 15 12 chr2 116972510 116972914 -133714940 - L1M4b LINE L1 -6452 407 3 2047 66 92 4 chr2 116973321 116973593 -133714261 + AluY SINE Alu 1 296 -15 21 0 0 0 chr2 116974197 116974218 -133713636 + AT_rich Low_complexity Low_complexity 1 21 0 251 284 26 17 chr2 116975058 116975174 -133712680 - HAL1 LINE L1 -887 1620 1504 5265 90 14 14 chr2 116975286 116976052 -133711802 - MER4E LTR ERV1 0 766 1 254 273 58 36 chr2 116976081 116976220 -133711634 - HAL1 LINE L1 -1067 1440 1299 21 0 0 0 chr2 116976581 116976602 -133711252 + AT_rich Low_complexity Low_complexity 1 21 0 185 362 153 53 chr2 116978609 116979026 -133708828 + L2 LINE L2 2812 3270 -2 22 35 0 0 chr2 116979114 116979143 -133708711 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 116979380 116979402 -133708452 + AT_rich Low_complexity Low_complexity 1 22 0 1809 174 124 16 chr2 116979538 116979924 -133707930 - MSTA LTR MaLR 0 428 1 1674 138 3 14 chr2 116979924 116980206 -133707648 - MSTA-int LTR MaLR 0 1580 1302 2197 125 20 8 chr2 116980206 116980557 -133707297 + THE1A LTR MaLR 1 355 0 11063 102 6 22 chr2 116980559 116980944 -133706910 + THE1A-int LTR MaLR 3 392 -1188 25610 28 2 0 chr2 116980944 116984802 -133703052 - L1PA3 LINE L1 0 6155 2291 11063 102 6 22 chr2 116984802 116986019 -133701835 + THE1A-int LTR MaLR 392 1580 0 2155 135 14 14 chr2 116986019 116986374 -133701480 + THE1A LTR MaLR 1 355 0 6958 173 12 44 chr2 116986374 116987718 -133700136 - MSTA-int LTR MaLR -276 1304 3 1345 156 114 70 chr2 116987720 116988079 -133699775 - THE1C LTR MaLR 0 375 1 411 21 0 0 chr2 116988106 116988154 -133699700 + (CA)n Simple_repeat Simple_repeat 1 48 0 232 316 60 17 chr2 116988270 116988387 -133699467 + MIR SINE MIR 71 192 -70 354 342 91 16 chr2 116989646 116989833 -133698021 - L3b LINE CR1 -8 1575 1375 258 212 71 0 chr2 116990612 116990711 -133697143 + L1ME4a LINE L1 6016 6121 0 1384 261 122 2 chr2 116990736 116991169 -133696685 + MER90 LTR ERV1 1 485 -90 413 233 88 6 chr2 116991503 116991662 -133696192 - MER20B DNA MER1_type -62 721 550 5731 151 26 40 chr2 116991787 116992030 -133695824 + L1MA4A LINE L1 4582 4827 -1476 2074 112 30 0 chr2 116992030 116992158 -133695696 + AluY SINE Alu 1 124 -187 273 29 0 0 chr2 116992158 116992192 -133695662 + (CAA)n Simple_repeat Simple_repeat 2 35 0 2074 112 30 0 chr2 116992192 116992358 -133695496 + AluY SINE Alu 124 304 -7 5731 151 26 40 chr2 116992358 116992749 -133695105 + L1MA4A LINE L1 4827 5222 -1081 2723 16 3 0 chr2 116992749 116993059 -133694795 + AluYa5 SINE Alu 1 311 0 5731 151 26 40 chr2 116993059 116994157 -133693697 + L1MA4A LINE L1 5222 6302 -1 1458 194 86 43 chr2 116994814 116995210 -133692644 + LTR52 LTR ERVL 1 413 -8 2233 58 0 0 chr2 116995603 116995878 -133691976 - AluY SINE Alu -8 303 29 255 365 45 20 chr2 116996258 116996458 -133691396 + MLT1K LTR MaLR 204 408 -180 303 349 169 26 chr2 116996781 116997237 -133690617 + L2 LINE L2 2269 2789 -525 226 306 97 28 chr2 116997544 116997688 -133690166 + L2 LINE L2 3160 3313 0 1805 196 14 8 chr2 116997972 116998335 -133689519 - MLT1A1 LTR MaLR 0 365 1 562 224 130 73 chr2 117000112 117000358 -133687496 + MLT1C LTR MaLR 10 269 -198 415 245 25 82 chr2 117000350 117000509 -133687345 + MER21B LTR ERV1 562 711 -152 * 481 238 48 0 chr2 117000504 117000609 -133687245 + MER21B LTR ERV1 645 754 -109 2450 232 33 103 chr2 117000637 117001459 -133686395 + MLT1C-int LTR MaLR 607 1370 -1 1158 240 77 43 chr2 117001465 117001904 -133685950 + MLT1C LTR MaLR 6 453 -14 26 0 0 0 chr2 117002531 117002557 -133685297 + AT_rich Low_complexity Low_complexity 1 26 0 315 0 0 0 chr2 117002622 117002657 -133685197 + (CA)n Simple_repeat Simple_repeat 2 36 0 1609 190 3 18 chr2 117003657 117003941 -133683913 + AluJo SINE Alu 1 280 -32 1257 220 131 11 chr2 117004289 117004639 -133683215 + MSTD LTR MaLR 5 396 0 779 196 103 36 chr2 117004935 117005159 -133682695 + MLT2B1 LTR ERVL 1 239 -175 3320 125 9 7 chr2 117005334 117005877 -133681977 + L1PA10 LINE L1 4827 5370 -776 1274 96 74 135 chr2 117005874 117006182 -133681672 + L1PA10 LINE L1 5876 6157 -9 * 425 303 58 13 chr2 117006361 117006516 -133681338 + MIR SINE MIR 3 164 -98 2080 127 0 0 chr2 117006917 117007224 -133680630 + AluSx SINE Alu 1 307 0 1966 118 4 0 chr2 117007628 117007946 -133679908 - AluSg SINE Alu 0 319 1 248 315 9 9 chr2 117008221 117008329 -133679525 - MER33 DNA MER1_type -211 113 6 313 306 126 16 chr2 117009060 117009243 -133678611 + MIR SINE MIR 1 203 -59 371 192 173 6 chr2 117009930 117010086 -133677768 - MER5C DNA MER1_type -9 315 134 22 35 0 0 chr2 117010529 117010558 -133677296 + AT_rich Low_complexity Low_complexity 1 29 0 5620 128 12 9 chr2 117010770 117011672 -133676182 - L1PA14 LINE L1 -1 6160 5257 3969 122 21 11 chr2 117011672 117012230 -133675624 + L1MA3 LINE L1 5636 6213 -92 2338 90 3 0 chr2 117012230 117012530 -133675324 - AluSq SINE Alu -12 301 1 3969 122 21 11 chr2 117012530 117012624 -133675230 + L1MA3 LINE L1 6213 6305 0 5620 128 12 9 chr2 117012624 117012647 -133675207 - L1PA14 LINE L1 -904 5257 5236 3590 131 62 5 chr2 117012654 117013256 -133674598 - L1PA16 LINE L1 -6 6160 5525 410 237 41 0 chr2 117013633 117013730 -133674124 - MER5C DNA MER1_type -210 114 14 297 397 0 0 chr2 117014088 117014267 -133673587 - L1MEd LINE L1 -5354 765 587 1215 219 106 100 chr2 117014296 117014788 -133673066 + MLT1D LTR MaLR 5 499 -6 276 314 29 29 chr2 117014835 117014937 -133672917 - MER5A DNA MER1_type -84 105 4 21 0 0 0 chr2 117015046 117015067 -133672787 + AT_rich Low_complexity Low_complexity 1 21 0 46 45 0 0 chr2 117015505 117015572 -133672282 + AT_rich Low_complexity Low_complexity 1 67 0 183 100 0 0 chr2 117015605 117015635 -133672219 + (TA)n Simple_repeat Simple_repeat 1 30 0 273 243 81 0 chr2 117015638 117015712 -133672142 - MIR SINE MIR -71 191 112 189 347 0 13 chr2 117015832 117015907 -133671947 - MIR SINE MIR -169 93 20 306 354 153 27 chr2 117016148 117017105 -133670749 + L2 LINE L2 1352 2428 -886 257 316 107 37 chr2 117017168 117017412 -133670442 - LTR41 LTR ERVL -10 763 503 372 202 11 22 chr2 117017921 117018010 -133669844 - LTR41 LTR ERVL -668 105 18 240 200 0 0 chr2 117020398 117020448 -133667406 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 24 77 0 0 chr2 117020834 117020886 -133666968 + AT_rich Low_complexity Low_complexity 1 52 0 231 337 12 0 chr2 117021715 117021801 -133666053 + L1M4 LINE L1 3969 4055 -2091 226 246 15 15 chr2 117021821 117021886 -133665968 + LTR16A1 LTR ERVL 387 451 -6 24 106 0 0 chr2 117021893 117021987 -133665867 + AT_rich Low_complexity Low_complexity 1 94 0 22 70 0 0 chr2 117022220 117022263 -133665591 + AT_rich Low_complexity Low_complexity 1 43 0 951 245 64 70 chr2 117022580 117023049 -133664805 + LTR53 LTR ERVL 43 508 -11 305 333 24 18 chr2 117023060 117023225 -133664629 + L1M4 LINE L1 3712 3877 -2269 221 140 60 0 chr2 117023455 117023505 -133664349 + A-rich Low_complexity Low_complexity 5 57 0 22 70 0 0 chr2 117024090 117024133 -133663721 + AT_rich Low_complexity Low_complexity 1 43 0 4627 180 13 0 chr2 117024559 117025398 -133662456 + L1P4 LINE L1 3794 4643 -1503 35546 31 17 1 chr2 117025398 117031424 -133656430 + L1PA2 LINE L1 2 6155 0 4027 144 20 1 chr2 117031420 117032274 -133655580 + L1P4 LINE L1 4630 5496 -665 * 6927 119 12 10 chr2 117032374 117033607 -133654247 + L1MA1 LINE L1 5065 6298 -4 842 220 190 12 chr2 117033627 117033959 -133653895 + L1ME2 LINE L1 5760 6150 -14 3164 225 67 18 chr2 117034112 117035126 -133652728 - L1MB2 LINE L1 -2 6238 5175 563 245 43 40 chr2 117035205 117035507 -133652347 - L1MB2 LINE L1 -2949 3266 2964 963 256 73 43 chr2 117035529 117035858 -133651996 - L1MB2 LINE L1 -3450 2765 2448 3326 56 16 11 chr2 117035858 117036304 -133651550 + LTR7 LTR ERV1 1 448 -2 963 256 73 43 chr2 117036304 117036701 -133651153 - L1MB2 LINE L1 -3767 2448 2042 683 261 125 42 chr2 117036835 117037691 -133650163 - L1MCa LINE L1 -4621 2501 1372 228 367 0 0 chr2 117037788 117037878 -133649976 - L1MCa LINE L1 -5513 910 821 181 119 34 153 chr2 117038000 117038059 -133649795 - L2 LINE L2 -528 2786 2735 203 161 0 0 chr2 117039178 117039209 -133648645 + (CA)n Simple_repeat Simple_repeat 2 32 0 531 105 0 42 chr2 117039366 117039461 -133648393 + MER53 DNA DNA 23 113 -76 271 247 75 0 chr2 117039523 117039616 -133648238 - MER53 DNA DNA -88 101 2 1734 168 7 0 chr2 117040579 117040859 -133646995 - AluSx SINE Alu -30 282 1 26 64 0 0 chr2 117041886 117041933 -133645921 + AT_rich Low_complexity Low_complexity 1 47 0 471 266 53 49 chr2 117042706 117042932 -133644922 + L1MC4 LINE L1 6836 7062 -980 228 173 19 19 chr2 117043281 117043333 -133644521 + (CA)n Simple_repeat Simple_repeat 1 52 0 730 282 98 7 chr2 117043927 117044214 -133643640 - MER89 LTR ERV1 -9 550 238 277 250 0 0 chr2 117044253 117044317 -133643537 - MER89 LTR ERV1 -494 65 2 2885 83 0 2 chr2 117044386 117044783 -133643071 + L1PA13 LINE L1 5766 6161 -2 1376 206 17 21 chr2 117045660 117045951 -133641903 - AluJo SINE Alu -10 292 3 334 277 47 61 chr2 117046697 117046845 -133641009 + MER97a DNA MER1_type? 1 146 -748 337 207 46 46 chr2 117047188 117047275 -133640579 + MLT1J2 LTR MaLR 364 450 0 247 326 28 64 chr2 117047519 117047660 -133640194 + MIR SINE MIR 6 141 -121 21 57 0 0 chr2 117048476 117048511 -133639343 + AT_rich Low_complexity Low_complexity 1 35 0 2225 102 3 0 chr2 117048548 117048843 -133639011 + AluSp SINE Alu 1 296 -17 954 175 22 49 chr2 117049085 117049308 -133638546 + LTR49 LTR ERV1 1 217 -378 2362 99 20 12 chr2 117049317 117049659 -133638195 - THE1A LTR MaLR -8 347 3 11097 108 6 8 chr2 117049661 117049985 -133637869 - THE1A-int LTR MaLR 0 1580 1257 1850 107 8 0 chr2 117049985 117050237 -133637617 + AluSq SINE Alu 39 292 -21 11097 108 6 8 chr2 117050237 117051495 -133636359 - THE1A-int LTR MaLR -323 1257 1 2489 106 17 0 chr2 117051495 117051844 -133636010 - THE1A LTR MaLR 0 355 1 1328 134 113 8 chr2 117051845 117052084 -133635770 + LTR49 LTR ERV1 214 477 -118 1580 183 21 0 chr2 117052201 117052486 -133635368 + MER41E LTR ERV1 1 291 -221 999 201 13 27 chr2 117052625 117052849 -133635005 + MER41E LTR ERV1 291 511 -1 345 281 22 0 chr2 117053084 117053173 -133634681 + MER41E-int LTR ERV1 1421 1511 -2774 345 279 60 56 chr2 117053870 117054085 -133633769 + MER41E-int LTR ERV1 1531 1746 -4930 1026 336 60 61 chr2 117054301 117055972 -133631882 + MER41E-int LTR ERV1 1692 3362 -4394 462 152 13 0 chr2 117055972 117056051 -133631803 - MADE1 DNA Mariner 0 80 1 1026 336 60 61 chr2 117056051 117056520 -133631334 + MER41E-int LTR ERV1 3362 3830 -3926 1524 111 0 0 chr2 117056520 117056718 -133631136 + AluSc SINE Alu 1 198 -111 1351 227 54 86 chr2 117056949 117057505 -133630349 + MER41E-int LTR ERV1 6135 6672 -4 3061 136 26 14 chr2 117057619 117058125 -133629729 + MER41E LTR ERV1 1 512 0 678 175 17 0 chr2 117058126 117058246 -133629608 + LTR49 LTR ERV1 474 595 0 689 247 43 31 chr2 117058300 117058555 -133629299 - ORSL DNA AcHobo -16 259 2 5455 141 33 6 chr2 117058560 117059572 -133628282 + L1PA15 LINE L1 5123 6158 -7 417 103 0 0 chr2 117060091 117060159 -133627695 + (TA)n Simple_repeat Simple_repeat 2 69 0 59 15 0 0 chr2 117061965 117062031 -133625823 + AT_rich Low_complexity Low_complexity 1 66 0 5822 172 42 11 chr2 117062401 117064477 -133623377 + L1MA8 LINE L1 4162 6286 -5 1504 175 35 124 chr2 117064660 117065311 -133622543 + MLT2B3 LTR ERVL 3 546 -8 334 265 132 7 chr2 117065765 117065901 -133621953 - MIR SINE MIR -40 222 70 1534 108 0 0 chr2 117066002 117066197 -133621657 - AluSg SINE Alu -115 195 1 2385 263 93 31 chr2 117066303 117066808 -133621046 + L1M4 LINE L1 3805 4277 -1869 1442 204 90 49 chr2 117066808 117067274 -133620580 - MER31A LTR ERV1 0 485 1 2385 263 93 31 chr2 117067274 117067999 -133619855 + L1M4 LINE L1 4277 5112 -1034 1301 261 106 12 chr2 117068028 117068602 -133619252 - L1MEc LINE L1 -5232 1164 537 1414 226 49 7 chr2 117068642 117069126 -133618728 + L1MB5 LINE L1 4977 5486 -688 1836 120 14 4 chr2 117069126 117069402 -133618452 + AluSc SINE Alu 30 308 -1 661 146 0 15 chr2 117069451 117069581 -133618273 + (GGAA)n Simple_repeat Simple_repeat 2 129 0 3008 184 30 34 chr2 117069583 117069692 -133618162 + L1MB5 LINE L1 5497 5605 -591 1747 174 7 19 chr2 117069692 117070002 -133617852 + AluJo SINE Alu 1 306 -6 2434 57 10 0 chr2 117070007 117070303 -133617551 + AluY SINE Alu 7 305 -6 3008 184 30 34 chr2 117070303 117070890 -133616964 + L1MB5 LINE L1 5609 6196 0 259 324 32 82 chr2 117072009 117072290 -133615564 + L2 LINE L2 2827 3093 -179 279 227 0 0 chr2 117073042 117073108 -133614746 + (TA)n Simple_repeat Simple_repeat 2 67 0 2305 74 0 0 chr2 117073109 117073393 -133614461 + AluY SINE Alu 1 284 -27 413 0 39 0 chr2 117073398 117073450 -133614404 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 22 0 0 0 chr2 117073758 117073780 -133614074 + AT_rich Low_complexity Low_complexity 1 22 0 918 235 166 22 chr2 117074287 117074606 -133613248 - MLT1A1 LTR MaLR 0 365 1 2099 123 13 3 chr2 117077239 117077548 -133610306 + AluSx SINE Alu 1 312 0 268 224 0 24 chr2 117077548 117077633 -133610221 + GA-rich Low_complexity Low_complexity 3 85 0 357 306 146 36 chr2 117077767 117078068 -133609786 + L1MEc LINE L1 1039 1241 -5301 28 0 0 0 chr2 117078183 117078211 -133609643 + AT_rich Low_complexity Low_complexity 1 28 0 904 300 101 28 chr2 117078244 117078790 -133609064 + L1ME3A LINE L1 5533 6118 -52 24 32 0 0 chr2 117079049 117079080 -133608774 + AT_rich Low_complexity Low_complexity 1 31 0 267 361 58 7 chr2 117079591 117079746 -133608108 - MIR3 SINE MIR -27 181 19 22 0 0 0 chr2 117080661 117080683 -133607171 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 117081097 117081134 -133606720 + AT_rich Low_complexity Low_complexity 1 37 0 2533 66 0 0 chr2 117082147 117082450 -133605404 + AluY SINE Alu 2 304 -7 243 347 102 34 chr2 117082645 117082821 -133605033 + MIR SINE MIR 65 252 -10 270 272 0 25 chr2 117083079 117083160 -133604694 - MER103 DNA DNA -45 121 43 1343 111 0 0 chr2 117084459 117084640 -133603214 - AluSg SINE Alu -125 185 5 2153 122 7 0 chr2 117084889 117085193 -133602661 - AluSq SINE Alu -7 306 1 875 39 0 0 chr2 117085463 117085603 -133602251 + L1PA5 LINE L1 6038 6177 0 3176 84 9 9 chr2 117085954 117086404 -133601450 + LTR7 LTR ERV1 1 450 0 1334 86 11 16 chr2 117087435 117087621 -133600233 - AluSx SINE Alu -7 305 121 1172 53 0 13 chr2 117087645 117087797 -133600057 - L1PA5 LINE L1 -6 6148 5999 964 119 0 8 chr2 117087800 117087934 -133599920 - AluSx SINE Alu -179 133 1 333 261 176 11 chr2 117088201 117088377 -133599477 + LTR50 LTR ERVL 293 497 -298 675 91 218 0 chr2 117088451 117088561 -133599293 + AluSg SINE Alu 1 134 -176 2181 94 7 3 chr2 117088561 117088849 -133599005 + AluSq SINE Alu 1 289 -24 357 290 65 35 chr2 117088889 117089120 -133598734 + MER112 DNA MER1_type 23 260 0 219 191 0 0 chr2 117089547 117089615 -133598239 + GA-rich Low_complexity Low_complexity 1 68 0 536 216 0 27 chr2 117089626 117089737 -133598117 - AluSq/x SINE Alu -204 108 1 193 337 11 22 chr2 117090224 117090313 -133597541 + MIR3 SINE MIR 109 196 -12 1955 138 3 16 chr2 117090576 117090881 -133596973 + AluSx SINE Alu 1 301 -11 270 116 0 0 chr2 117090883 117090926 -133596928 + (TA)n Simple_repeat Simple_repeat 2 44 0 335 253 0 40 chr2 117090929 117091028 -133596826 - L1MC4 LINE L1 -1339 6703 6609 3307 263 51 29 chr2 117091133 117092260 -133595594 + L1PA13 LINE L1 722 2064 -4723 1269 239 150 42 chr2 117093062 117094485 -133593369 - L1M4c LINE L1 -4115 2531 834 1019 171 74 169 chr2 117094682 117095139 -133592715 + L1MA4 LINE L1 5888 6298 -2 290 327 148 14 chr2 117095192 117095415 -133592439 - L2 LINE L2 -456 2858 2606 1059 231 36 11 chr2 117095631 117095908 -133591946 + L1PA13 LINE L1 2945 3228 -3569 1325 232 23 8 chr2 117096140 117096514 -133591340 + L1M3 LINE L1 5224 5603 -577 1904 250 56 60 chr2 117096525 117097398 -133590456 + L1M4 LINE L1 3 831 -6199 1376 206 17 21 chr2 117098102 117098393 -133589461 + AluJo SINE Alu 3 292 -10 1056 249 25 72 chr2 117099189 117099590 -133588264 + L1M4 LINE L1 4954 5335 -1771 346 260 10 42 chr2 117099608 117099704 -133588150 + L2 LINE L2 3221 3313 0 1544 280 50 8 chr2 117099808 117100443 -133587411 + L1M4 LINE L1 5339 6000 -1106 250 335 24 6 chr2 117100458 117100628 -133587226 + CT-rich Low_complexity Low_complexity 4 176 0 1955 134 0 16 chr2 117100864 117101177 -133586677 + AluSq SINE Alu 1 308 -5 3112 211 16 17 chr2 117101301 117102483 -133585371 - L1MB2 LINE L1 -269 5902 4717 280 278 33 0 chr2 117103137 117103227 -133584627 - L1ME1 LINE L1 -5 6161 6069 2145 89 14 3 chr2 117103250 117103543 -133584311 - AluSg SINE Alu -14 296 1 820 49 10 0 chr2 117103813 117103952 -133583902 + L1PA5 LINE L1 6038 6177 0 572 291 103 30 chr2 117104698 117105134 -133582720 - MERVL LTR ERVL -937 4548 4081 365 206 10 39 chr2 117105928 117106030 -133581824 + LTR67 LTR ERVL 457 555 -2 247 150 0 0 chr2 117106148 117106188 -133581666 - MER91 DNA MER1_type -17 179 140 717 182 25 64 chr2 117108141 117108344 -133579510 - LTR49 LTR ERV1 -400 195 1 2132 109 3 0 chr2 117108597 117108881 -133578973 - AluSq SINE Alu -28 285 1 1148 241 39 47 chr2 117108882 117109243 -133578611 + L1P LINE L1 3199 3556 -2590 457 214 10 0 chr2 117109246 117109349 -133578505 + L1M4 LINE L1 4553 4656 -1490 1098 214 5 0 chr2 117109357 117109558 -133578296 + AluJb SINE Alu 7 208 -104 2824 211 32 10 chr2 117109637 117110324 -133577530 + L1P LINE L1 4649 5350 -796 26 30 0 0 chr2 117111272 117111305 -133576549 + AT_rich Low_complexity Low_complexity 1 33 0 22 56 0 0 chr2 117112311 117112347 -133575507 + AT_rich Low_complexity Low_complexity 1 36 0 183 273 0 0 chr2 117112970 117113014 -133574840 + MIR SINE MIR 101 144 -64 658 218 32 0 chr2 117113287 117113494 -133574360 + L1M4 LINE L1 5212 5426 -738 996 264 106 10 chr2 117113496 117113977 -133573877 + L1M4 LINE L1 3886 4412 -1734 222 293 9 94 chr2 117114312 117114418 -133573436 + L2 LINE L2 3195 3291 -22 21 0 0 0 chr2 117114547 117114568 -133573286 + AT_rich Low_complexity Low_complexity 1 21 0 234 149 0 45 chr2 117114606 117114673 -133573181 + (TA)n Simple_repeat Simple_repeat 1 64 0 342 286 158 48 chr2 117117031 117117371 -133570483 - L1ME3 LINE L1 -300 5862 5482 3419 49 6 2 chr2 117117397 117118038 -133569816 + L1P2 LINE L1 4970 5615 -540 337 319 58 5 chr2 117118519 117118707 -133569147 + LTR67 LTR ERVL 360 557 0 838 322 95 17 chr2 117118814 117119286 -133568568 + L2 LINE L2 1613 2121 -1193 734 256 55 76 chr2 117119507 117120085 -133567769 - L1ME LINE L1 -5108 1288 748 300 219 16 0 chr2 117120695 117120759 -133567095 + MER39 LTR ERV1 324 388 -319 2776 220 87 14 chr2 117120859 117121733 -133566121 - L1 LINE L1 -2303 3843 2906 2421 100 41 0 chr2 117121744 117122134 -133565720 + L1P LINE L1 3 408 -5738 1371 233 0 7 chr2 117122304 117122583 -133565271 + AluJo SINE Alu 1 277 -35 38 39 0 0 chr2 117122602 117122654 -133565200 + AT_rich Low_complexity Low_complexity 1 52 0 370 259 138 26 chr2 117122733 117122965 -133564889 + MER5C DNA MER1_type 18 275 -49 28 48 0 0 chr2 117123437 117123479 -133564375 + AT_rich Low_complexity Low_complexity 1 42 0 342 0 0 0 chr2 117124113 117124151 -133563703 + (CA)n Simple_repeat Simple_repeat 2 39 0 839 123 0 0 chr2 117124614 117124744 -133563110 - L1P5 LINE L1 -685 5466 5337 * 3293 126 6 4 chr2 117124743 117125244 -133562610 + L1PB1 LINE L1 5576 6077 -74 1428 126 14 65 chr2 117125344 117125622 -133562232 + L1P4 LINE L1 5325 5588 -580 5231 154 43 3 chr2 117125622 117126533 -133561321 + Tigger1 DNA MER2_type 655 1601 -817 2665 147 47 51 chr2 117126539 117127090 -133560764 + Tigger1 DNA MER2_type 1870 2418 0 12969 85 15 5 chr2 117127133 117129930 -133557924 + L1PA7 LINE L1 3322 6153 -1 22 0 0 0 chr2 117129978 117130000 -133557854 + AT_rich Low_complexity Low_complexity 1 22 0 307 350 43 31 chr2 117131225 117131388 -133556466 - MIR SINE MIR -24 238 74 412 244 0 0 chr2 117131791 117131869 -133555985 - MER44D DNA MER2_type -627 78 1 285 29 0 0 chr2 117132108 117132142 -133555712 + (CA)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr2 117132177 117132198 -133555656 + AT_rich Low_complexity Low_complexity 1 21 0 404 378 82 7 chr2 117132639 117132909 -133554945 - L2 LINE L2 -2796 518 229 1560 256 115 66 chr2 117132973 117133943 -133553911 + L1 LINE L1 3595 4655 -1491 2116 125 0 10 chr2 117133943 117134248 -133553606 - AluY SINE Alu -9 302 1 1560 256 115 66 chr2 117134248 117134665 -133553189 + L1 LINE L1 4655 5050 -1096 359 234 57 40 chr2 117134818 117134942 -133552912 + L1 LINE L1 5025 5150 -996 653 217 60 31 chr2 117135089 117135256 -133552598 + MLT1F1 LTR MaLR 10 189 -371 1981 238 40 12 chr2 117135258 117135686 -133552168 - MER68 LTR ERV1 0 562 123 283 293 52 17 chr2 117135701 117135817 -133552037 + MLT1K LTR MaLR 69 188 -400 * 293 53 0 0 chr2 117135800 117135838 -133552016 + 5S rRNA rRNA 3 40 -81 495 149 23 11 chr2 117135896 117135983 -133551871 - MER68 LTR ERV1 -472 90 3 842 227 227 7 chr2 117135991 117136286 -133551568 + MLT1F1 LTR MaLR 190 549 -18 390 180 90 22 chr2 117136298 117136387 -133551467 + MLT1D LTR MaLR 13 107 -398 2208 118 0 3 chr2 117136388 117136692 -133551162 - AluSq SINE Alu -10 303 1 618 140 0 0 chr2 117136721 117136821 -133551033 + MLT2B1 LTR ERVL 1 100 -420 466 213 3 146 chr2 117136921 117137146 -133550708 - Tigger7 DNA MER2_type -376 174 1 1723 236 184 13 chr2 117138271 117138885 -133548969 + L1MC4 LINE L1 7113 7831 -211 261 243 29 0 chr2 117139485 117139555 -133548299 + (TA)n Simple_repeat Simple_repeat 1 72 0 282 210 0 62 chr2 117140601 117140682 -133547172 - MER5C DNA MER1_type -1 323 248 22 0 0 0 chr2 117141141 117141163 -133546691 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr2 117141321 117141349 -133546505 + AT_rich Low_complexity Low_complexity 1 28 0 234 355 65 9 chr2 117141965 117142072 -133545782 + MLT1L LTR MaLR 409 521 -94 3830 88 0 6 chr2 117143511 117144025 -133543829 + MER9 LTR ERVK 1 511 0 4380 86 5 3 chr2 117144025 117144616 -133543238 + HERVK9 LTR ERVK 1 592 -5324 12153 63 3 0 chr2 117144616 117146131 -133541723 + HERVK9 LTR ERVK 1268 2786 -3130 1911 43 0 0 chr2 117146131 117146362 -133541492 + HERVK9 LTR ERVK 3711 3941 -1975 * 7709 96 3 6 chr2 117146361 117147417 -133540437 + HERVK9 LTR ERVK 4582 5634 -282 2238 112 14 0 chr2 117147451 117147790 -133540064 + HERVK9 LTR ERVK 4916 5916 0 3703 81 14 8 chr2 117147790 117148298 -133539556 + MER9 LTR ERVK 1 511 0 1704 159 51 46 chr2 117149016 117149388 -133538466 - THE1C LTR MaLR -1 374 1 8793 152 49 17 chr2 117149392 117150918 -133536936 - THE1C-int LTR MaLR -4 1576 2 1849 167 38 30 chr2 117150919 117151291 -133536563 - THE1C LTR MaLR 0 375 1 1470 165 4 8 chr2 117151291 117151551 -133536303 - THE1C-int LTR MaLR 0 1580 1322 8636 25 0 0 chr2 117151654 117152691 -133535163 - L1P LINE L1 -2048 4098 3062 820 275 36 29 chr2 117153353 117153629 -133534225 + LTR16A LTR ERVL 1 278 -172 531 269 138 59 chr2 117153647 117154090 -133533764 - L1MC4 LINE L1 -69 7973 7496 23 33 0 0 chr2 117154820 117154850 -133533004 + AT_rich Low_complexity Low_complexity 1 30 0 2986 100 0 35 chr2 117155407 117155887 -133531967 + HERVH LTR ERV1 2533 2995 -4718 805 136 79 0 chr2 117155866 117156006 -133531848 + HERVH LTR ERV1 3140 3290 -4423 * 1492 155 4 4 chr2 117155996 117156241 -133531613 + HERVH LTR ERV1 3492 3736 -3977 1886 147 5 5 chr2 117156251 117156559 -133531295 + HERVH LTR ERV1 3995 4290 -3423 * 2393 114 22 3 chr2 117156557 117156925 -133530929 + HERVH LTR ERV1 4221 4595 -3118 504 343 131 11 chr2 117157177 117157710 -133530144 - MLT1L LTR MaLR -18 597 1 311 258 30 68 chr2 117157924 117158056 -133529798 + MIR SINE MIR 80 206 -56 6063 25 6 0 chr2 117158291 117159001 -133528853 - L1P LINE L1 -1400 4746 4033 1218 266 27 0 chr2 117159520 117159888 -133527966 + L1 LINE L1 4483 4860 -1286 * 4072 164 92 27 chr2 117159885 117160712 -133527142 - L1PA6 LINE L1 -2 6152 5272 293 130 0 0 chr2 117160712 117160766 -133527088 + L1 LINE L1 4981 5034 -1112 348 127 0 0 chr2 117161660 117161715 -133526139 + (CA)n Simple_repeat Simple_repeat 2 56 0 13394 118 1 5 chr2 117162238 117164175 -133523679 - HERV9 LTR ERV1 -2270 6129 4200 1025 195 36 0 chr2 117164547 117164742 -133523112 - MER2 DNA MER2_type -136 209 8 2112 113 0 7 chr2 117164911 117165224 -133522630 + AluSx SINE Alu 1 311 0 1423 162 60 75 chr2 117165801 117166206 -133521648 - L1MA7 LINE L1 -10 6281 5886 430 225 29 13 chr2 117166794 117166893 -133520961 + MER5A DNA MER1_type 4 103 -86 34224 87 10 19 chr2 117169632 117173062 -133514792 - L1PA8 LINE L1 -3 6169 2816 197 33 33 0 chr2 117173062 117173092 -133514762 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 34224 87 10 19 chr2 117173092 117175267 -133512587 - L1PA8 LINE L1 -3356 2816 623 392 254 76 49 chr2 117175474 117175659 -133512195 - MIR SINE MIR -25 237 48 21 71 0 0 chr2 117178076 117178118 -133509736 + AT_rich Low_complexity Low_complexity 1 42 0 2481 271 55 28 chr2 117178351 117178377 -133509477 + L1MD1 LINE L1 438 462 -6078 6795 65 34 0 chr2 117178377 117179243 -133508611 + MER11D LTR ERVK 3 897 0 2481 271 55 28 chr2 117179243 117179515 -133508339 + L1MD1 LINE L1 462 725 -5815 2064 129 28 33 chr2 117179515 117179879 -133507975 + THE1B LTR MaLR 3 364 0 2481 271 55 28 chr2 117179879 117180329 -133507525 + L1MD1 LINE L1 725 1207 -5333 2128 252 74 23 chr2 117180320 117181497 -133506357 + L1MD1 LINE L1 2378 3625 -2915 * 207 0 0 0 chr2 117181545 117181568 -133506286 + (A)n Simple_repeat Simple_repeat 1 23 0 3745 226 54 8 chr2 117181613 117182749 -133505105 + L1MD1 LINE L1 5417 6600 -36 893 208 39 24 chr2 117182992 117183199 -133504655 - L1MD1 LINE L1 -182 6060 5851 899 128 109 0 chr2 117185979 117186135 -133501719 + MER51A LTR ERV1 1 173 -461 2437 106 0 0 chr2 117186237 117186596 -133501258 + HERV9 LTR ERV1 6398 6756 -1643 * 6847 115 10 20 chr2 117186595 117187583 -133500271 + HERV9 LTR ERV1 7353 8332 -67 7731 35 0 0 chr2 117187583 117188480 -133499374 + MER11D LTR ERVK 1 897 0 6847 115 10 20 chr2 117188480 117188548 -133499306 + HERV9 LTR ERV1 8332 8399 0 867 171 98 91 chr2 117188548 117188823 -133499031 + LTR12 LTR ERV1 1 277 -437 325 247 0 0 chr2 117188823 117188900 -133498954 + LTR30 LTR ERV1 544 620 -102 781 154 24 0 chr2 117188900 117189023 -133498831 + LTR12 LTR ERV1 355 480 -234 4769 197 15 31 chr2 117189024 117190857 -133496997 + L1PA16 LINE L1 4364 6162 -4 2369 274 75 37 chr2 117190863 117193401 -133494453 - L1 LINE L1 -2978 3232 774 274 351 13 46 chr2 117193589 117193740 -133494114 - L1 LINE L1 -5499 632 487 1915 48 0 0 chr2 117193794 117194024 -133493830 - AluY SINE Alu -5 306 77 245 322 90 43 chr2 117194060 117194315 -133493539 - L1 LINE L1 -5710 431 165 366 323 33 34 chr2 117194573 117194743 -133493111 + MIR SINE MIR 22 196 -66 11647 211 47 34 chr2 117195024 117199462 -133488392 + L1MA4 LINE L1 6 4711 -1771 2213 88 0 20 chr2 117199462 117199757 -133488097 + AluSg SINE Alu 1 289 -21 11647 211 47 34 chr2 117199757 117201547 -133486307 + L1MA4 LINE L1 4711 6476 -6 289 178 0 0 chr2 117201555 117201600 -133486254 + Alu SINE Alu 241 285 -15 27 29 0 0 chr2 117201606 117201640 -133486214 + AT_rich Low_complexity Low_complexity 1 34 0 1886 204 42 82 chr2 117202238 117202813 -133485041 + LTR6A LTR ERV1 13 564 0 1196 172 42 10 chr2 117202816 117202891 -133484963 + MER51A LTR ERV1 379 450 -190 2279 52 21 0 chr2 117202891 117203178 -133484676 - AluY SINE Alu -18 293 1 1196 172 42 10 chr2 117203178 117203352 -133484502 + MER51A LTR ERV1 450 629 -11 1111 238 133 33 chr2 117203403 117203862 -133483992 - MLT1D LTR MaLR 0 505 1 22 56 0 0 chr2 117204384 117204420 -133483434 + AT_rich Low_complexity Low_complexity 1 36 0 395 322 100 35 chr2 117205083 117205313 -133482541 - MIR SINE MIR -2 260 16 350 392 50 26 chr2 117206048 117206359 -133481495 + L2 LINE L2 2716 3038 -275 1596 175 7 30 chr2 117206435 117206732 -133481122 + AluJo SINE Alu 1 290 -22 189 214 36 18 chr2 117206733 117206789 -133481065 - L2 LINE L2 -28 3285 3229 23 0 0 0 chr2 117207573 117207596 -133480258 + AT_rich Low_complexity Low_complexity 1 23 0 201 353 0 0 chr2 117207745 117207796 -133480058 - L2 LINE L2 0 3272 3222 271 379 21 7 chr2 117207952 117208097 -133479757 - L2 LINE L2 -203 3069 2923 27 49 0 0 chr2 117209060 117209101 -133478753 + AT_rich Low_complexity Low_complexity 1 41 0 200 169 11 62 chr2 117209340 117209517 -133478337 + (TA)n Simple_repeat Simple_repeat 1 168 0 204 125 0 0 chr2 117209561 117209593 -133478261 + (TG)n Simple_repeat Simple_repeat 1 32 0 6755 229 61 23 chr2 117209647 117212550 -133475304 - L1MB1 LINE L1 -1 6167 3180 1879 184 3 0 chr2 117212546 117212851 -133475003 + L1PA15-16 LINE L1 1 306 -6543 * 7563 153 29 8 chr2 117212849 117214246 -133473608 + L1PA15-16 LINE L1 1456 2882 -3967 5211 260 31 17 chr2 117214360 117216128 -133471726 + L1 LINE L1 3257 5049 -1800 729 122 8 8 chr2 117216149 117216269 -133471585 + LTR12 LTR ERV1 1 234 -480 1744 123 4 4 chr2 117216318 117216571 -133471283 + HERV9 LTR ERV1 1677 1929 -6470 6605 104 1 7 chr2 117216577 117217505 -133470349 + HERV9 LTR ERV1 2435 3357 -5042 344 360 24 20 chr2 117217882 117218153 -133469701 + L2 LINE L2 2774 3044 -228 31 68 0 0 chr2 117218648 117218707 -133469147 + AT_rich Low_complexity Low_complexity 1 59 0 224 305 91 43 chr2 117218780 117218990 -133468864 - L2 LINE L2 -9 3304 3085 344 320 136 7 chr2 117220146 117220293 -133467561 + MIR SINE MIR 53 218 -44 244 155 17 17 chr2 117220418 117220476 -133467378 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 2054 123 0 0 chr2 117221423 117221734 -133466120 + AluSx SINE Alu 1 311 0 22 35 0 0 chr2 117222098 117222127 -133465727 + AT_rich Low_complexity Low_complexity 1 29 0 5306 167 30 16 chr2 117223011 117224378 -133463476 - L1MA6 LINE L1 0 6300 4906 4553 209 30 9 chr2 117224365 117225401 -133462453 + L1MA6 LINE L1 3850 4907 -1239 * 222 325 39 0 chr2 117225646 117225723 -133462131 + MIR SINE MIR 75 154 -108 208 333 130 0 chr2 117226060 117226129 -133461725 - MIR SINE MIR -165 97 20 * 624 243 165 19 chr2 117226074 117226280 -133461574 + MIR SINE MIR 15 250 -12 23 0 0 0 chr2 117226670 117226693 -133461161 + AT_rich Low_complexity Low_complexity 1 23 0 421 240 0 19 chr2 117226697 117226801 -133461053 - L1MC5 LINE L1 -52 7909 7808 364 299 34 54 chr2 117227720 117227867 -133459987 - L2 LINE L2 -927 2387 2244 334 374 87 15 chr2 117227870 117228274 -133459580 - L2 LINE L2 -1369 1945 1513 306 0 0 0 chr2 117228366 117228400 -133459454 + (TG)n Simple_repeat Simple_repeat 2 35 0 237 305 0 0 chr2 117228765 117228847 -133459007 - L1MC4 LINE L1 -1347 6695 6614 310 208 14 0 chr2 117228865 117228937 -133458917 + L1MCa LINE L1 1995 2067 -4359 * 353 292 0 0 chr2 117228874 117228963 -133458891 - L1MC4 LINE L1 -1340 6702 6614 327 278 0 22 chr2 117228970 117229060 -133458794 - L1MC4 LINE L1 -1340 6702 6615 * 337 303 0 0 chr2 117228986 117229075 -133458779 + L1MC4 LINE L1 6615 6703 -1339 * 347 264 0 22 chr2 117229036 117229127 -133458727 - L1MC4 LINE L1 -1340 6702 6614 246 181 56 14 chr2 117229189 117229261 -133458593 + (CATATA)n Simple_repeat Simple_repeat 3 77 0 26 30 0 0 chr2 117229911 117229944 -133457910 + AT_rich Low_complexity Low_complexity 1 33 0 1365 297 75 29 chr2 117232853 117233482 -133454372 - MLT2F LTR ERVL -3 660 3 386 294 59 24 chr2 117233643 117233813 -133454041 - MLT2E LTR ERVL -420 208 33 269 384 30 35 chr2 117234479 117234682 -133453172 - L2 LINE L2 -904 2410 2209 214 338 138 40 chr2 117234783 117235180 -133452674 - L2 LINE L2 -68 3245 2810 858 199 0 59 chr2 117235281 117235467 -133452387 - MER5A DNA MER1_type -2 187 13 560 321 153 31 chr2 117236653 117237070 -133450784 - L2 LINE L2 -18 3295 2828 383 234 162 0 chr2 117237611 117237765 -133450089 - L1MEc LINE L1 -3789 2426 2248 * 1060 284 98 22 chr2 117237760 117238586 -133449268 - L1MEc LINE L1 -4482 1914 1026 1229 212 8 4 chr2 117238588 117238795 -133449059 + LTR57 LTR ERVL 129 339 -72 207 0 0 0 chr2 117238795 117238818 -133449036 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1229 212 8 4 chr2 117238818 117238846 -133449008 + LTR57 LTR ERVL 339 365 -46 2390 281 37 7 chr2 117238847 117239610 -133448244 - L1MEc LINE L1 -5575 821 36 251 338 0 0 chr2 117239981 117240049 -133447805 - L3 LINE CR1 -212 1365 1298 251 302 22 115 chr2 117240073 117240255 -133447599 + L3 LINE CR1 1410 1574 -3 223 238 0 0 chr2 117240384 117240426 -133447428 + (TG)n Simple_repeat Simple_repeat 2 43 0 247 130 0 0 chr2 117240426 117240472 -133447382 + LTR66 LTR ERVL 394 439 -171 503 312 72 81 chr2 117242505 117243348 -133444506 + L1MC/D LINE L1 4405 5240 -906 455 351 68 8 chr2 117243379 117243749 -133444105 + L1MC/D LINE L1 5292 5683 -2125 369 268 36 72 chr2 117244131 117244269 -133443585 + L2 LINE L2 3139 3271 -1 27 0 0 0 chr2 117245197 117245224 -133442630 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 117245733 117245756 -133442098 + AT_rich Low_complexity Low_complexity 1 23 0 501 277 79 30 chr2 117246306 117246586 -133441268 - L1ME3A LINE L1 -250 5920 5635 21 0 0 0 chr2 117246825 117246846 -133441008 + AT_rich Low_complexity Low_complexity 1 21 0 360 241 14 106 chr2 117247081 117247222 -133440632 + L1MCa LINE L1 199 326 -6100 255 152 0 0 chr2 117247252 117247298 -133440556 + (TG)n Simple_repeat Simple_repeat 1 46 0 3760 255 39 29 chr2 117247298 117248501 -133439353 + L1MCa LINE L1 1996 3186 -3240 606 120 0 0 chr2 117248501 117248601 -133439253 + L1MA4 LINE L1 6195 6294 -6 3760 255 39 29 chr2 117248601 117248613 -133439241 + L1MCa LINE L1 3186 3196 -3230 348 110 0 110 chr2 117248613 117248695 -133439159 + L1MA4 LINE L1 6221 6293 -7 3760 255 39 29 chr2 117248695 117249088 -133438766 + L1MCa LINE L1 3196 3629 -2797 2147 124 0 7 chr2 117249088 117249395 -133438459 - AluSx SINE Alu -3 309 5 3760 255 39 29 chr2 117249395 117249713 -133438141 + L1MCa LINE L1 3629 3942 -2484 1645 105 17 0 chr2 117249827 117250065 -133437789 + L1PA7 LINE L1 5 246 -6215 * 29589 102 16 10 chr2 117250064 117255374 -133432480 + L1PA7 LINE L1 1144 6462 -7 834 236 60 0 chr2 117255369 117255619 -133432235 + L1M4 LINE L1 5127 5391 -755 * 757 240 0 6 chr2 117255631 117255810 -133432044 + L1MC1 LINE L1 6139 6316 -17 572 224 9 0 chr2 117256913 117257029 -133430825 + FLAM_A SINE Alu 5 121 -12 208 111 56 0 chr2 117257686 117257722 -133430132 + A-rich Low_complexity Low_complexity 3 40 0 6700 68 25 0 chr2 117258686 117259895 -133427959 - L1PA7 LINE L1 -13 6141 4922 208 135 0 0 chr2 117260404 117260441 -133427413 + (T)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr2 117260781 117260804 -133427050 + AT_rich Low_complexity Low_complexity 1 23 0 1242 246 88 41 chr2 117262575 117263014 -133424840 + MLT1C LTR MaLR 1 467 0 185 313 104 9 chr2 117264134 117264249 -133423605 + MIR SINE MIR 2 127 -135 456 235 82 95 chr2 117264251 117264545 -133423309 - MLT1J LTR MaLR -2 509 220 189 0 0 0 chr2 117264912 117264933 -133422921 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 285 266 229 18 chr2 117264933 117265042 -133422812 - L2 LINE L2 -17 3255 3124 993 255 70 82 chr2 117265139 117265687 -133422167 - L1ME3A LINE L1 -130 6034 5497 339 340 133 38 chr2 117265718 117266065 -133421789 + L2 LINE L2 2367 2746 -568 709 203 40 6 chr2 117266085 117266262 -133421592 - L1MB5 LINE L1 -305 5869 5687 * 1131 243 17 1 chr2 117266245 117266568 -133421286 + L1MB5 LINE L1 5849 6179 -1 455 200 61 0 chr2 117266566 117266681 -133421173 + L1MB7 LINE L1 6061 6182 -2 * 327 348 137 45 chr2 117266764 117267189 -133420665 + L2 LINE L2 2837 3300 -13 244 344 49 0 chr2 117269308 117269430 -133418424 - MIR SINE MIR -72 190 63 212 179 0 0 chr2 117270063 117270102 -133417752 + A-rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 117270291 117270314 -133417540 + AT_rich Low_complexity Low_complexity 1 23 0 248 232 497 0 chr2 117271070 117271221 -133416633 + MIR SINE MIR 15 240 -22 684 172 55 2 chr2 117271421 117271559 -133416295 + MLT2C1 LTR ERVL 1 124 -273 663 288 42 0 chr2 117271590 117271802 -133416052 + ERVL LTR ERVL 3794 4014 -1750 2876 237 113 37 chr2 117271802 117272363 -133415491 - L1M4 LINE L1 -1329 4817 4300 2645 104 68 43 chr2 117272363 117272833 -133415021 - L1MA2 LINE L1 0 6304 5823 2876 237 113 37 chr2 117272833 117273559 -133414295 - L1M4 LINE L1 -1846 4300 3433 1371 238 148 23 chr2 117273553 117274214 -133413640 - L1MCb LINE L1 -3990 2574 1831 * 763 184 75 9 chr2 117274188 117274400 -133413454 - L1MCb LINE L1 -4999 1565 1340 * 2653 257 45 85 chr2 117274429 117274970 -133412884 - L1MCb LINE L1 -4889 1156 595 1902 108 199 36 chr2 117274970 117275357 -133412497 + LTR47A LTR ERVL 1 450 -2 2653 257 45 85 chr2 117275357 117275565 -133412289 - L1MCb LINE L1 -5450 595 380 209 57 29 0 chr2 117275565 117275600 -133412254 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 2653 257 45 85 chr2 117275600 117276150 -133411704 - L1MCb LINE L1 -5665 380 3 1177 156 0 0 chr2 117276412 117276598 -133411256 + AluSq SINE Alu 2 187 -126 335 209 0 0 chr2 117276600 117276667 -133411187 + AluS SINE Alu 228 294 -7 228 242 81 0 chr2 117276731 117276793 -133411061 - LTR33 LTR ERVL -454 67 1 222 233 33 0 chr2 117277669 117277729 -133410125 - MIR SINE MIR -81 127 66 22 0 0 0 chr2 117278073 117278095 -133409759 + AT_rich Low_complexity Low_complexity 1 22 0 738 209 50 1 chr2 117278230 117278508 -133409346 - MER119 DNA MER1_type -2 581 262 201 78 0 133 chr2 117278538 117278628 -133409226 + (CAATT)n Simple_repeat Simple_repeat 2 79 0 23 0 0 0 chr2 117278991 117279014 -133408840 + AT_rich Low_complexity Low_complexity 1 23 0 1035 294 90 48 chr2 117279127 117279627 -133408227 + LTR33 LTR ERVL 1 521 0 315 344 49 54 chr2 117279658 117280083 -133407771 - L1MC/D LINE L1 -2062 5746 5324 3107 324 117 35 chr2 117280366 117282316 -133405538 + L2 LINE L2 311 2421 -893 286 290 101 45 chr2 117283123 117283499 -133404355 - HAL1 LINE L1 -737 1770 1374 23 54 0 0 chr2 117284975 117285012 -133402842 + AT_rich Low_complexity Low_complexity 1 37 0 2219 85 0 7 chr2 117285713 117285996 -133401858 + AluSc SINE Alu 13 293 -16 324 0 0 0 chr2 117286773 117286809 -133401045 + (TG)n Simple_repeat Simple_repeat 2 37 0 22 56 0 0 chr2 117287312 117287348 -133400506 + AT_rich Low_complexity Low_complexity 1 36 0 228 345 24 0 chr2 117287448 117287532 -133400322 + MER20B DNA MER1_type 43 128 -655 288 315 22 6 chr2 117287644 117287825 -133400029 - L1MEd LINE L1 -4971 1583 1400 303 312 76 76 chr2 117287982 117288221 -133399633 - L1MEd LINE L1 -5272 1282 1041 2221 108 7 0 chr2 117288221 117288527 -133399327 - AluY SINE Alu -3 308 1 28 48 0 0 chr2 117289078 117289120 -133398734 + AT_rich Low_complexity Low_complexity 1 42 0 274 254 64 52 chr2 117290715 117290888 -133396966 - L1M4 LINE L1 -2713 3433 3259 10000 165 26 13 chr2 117290979 117292920 -133394934 + L1P LINE L1 1730 3695 -2451 652 215 6 6 chr2 117292936 117293113 -133394741 - L1M4 LINE L1 -2957 3189 3013 685 305 67 44 chr2 117293134 117293475 -133394379 - L1MEd LINE L1 -5596 449 101 228 182 0 0 chr2 117293588 117293632 -133394222 + (TA)n Simple_repeat Simple_repeat 2 45 0 50 51 0 0 chr2 117293838 117293916 -133393938 + AT_rich Low_complexity Low_complexity 1 78 0 294 378 37 0 chr2 117295780 117295915 -133391939 - MIR SINE MIR -72 190 51 184 279 177 0 chr2 117295934 117296013 -133391841 - MIR SINE MIR -116 146 54 431 235 34 8 chr2 117297005 117297124 -133390730 + L1MC4a LINE L1 6338 6459 -1349 1648 279 148 33 chr2 117297154 117297732 -133390122 + L1MC4 LINE L1 6704 7214 -828 2367 101 48 25 chr2 117297732 117298088 -133389766 + THE1B LTR MaLR 1 364 0 10980 115 2 15 chr2 117298088 117299689 -133388165 + THE1B-int LTR MaLR 1 1580 0 2145 128 57 25 chr2 117299689 117300042 -133387812 + THE1B LTR MaLR 1 364 0 1648 279 148 33 chr2 117300042 117300471 -133387383 + L1MC4 LINE L1 7213 7830 -212 227 190 17 0 chr2 117300500 117300558 -133387296 + L1MD3 LINE L1 7927 7985 -10 317 297 65 32 chr2 117300998 117301153 -133386701 - MIR SINE MIR -13 249 90 475 229 69 23 chr2 117303605 117303736 -133384118 - MER69A DNA AcHobo -3 174 38 645 229 56 125 chr2 117303852 117304227 -133383627 - MLT1G1 LTR MaLR -126 416 68 4277 253 52 44 chr2 117304249 117306270 -133381584 + L1PA13 LINE L1 839 2993 -4581 12571 239 21 20 chr2 117306476 117310069 -133377785 + L1PA13 LINE L1 2799 6403 -1181 546 175 21 56 chr2 117310069 117310158 -133377696 - LTR19C LTR ERV1 0 779 695 2487 60 0 0 chr2 117310158 117310459 -133377395 + AluY SINE Alu 1 301 -10 546 175 21 56 chr2 117310459 117310512 -133377342 - LTR19C LTR ERV1 -84 695 642 185 313 36 48 chr2 117310626 117310709 -133377145 - MIR SINE MIR -124 138 57 2169 100 3 3 chr2 117310716 117311007 -133376847 + AluSq SINE Alu 1 291 -22 34 24 0 0 chr2 117311021 117311062 -133376792 + AT_rich Low_complexity Low_complexity 1 41 0 389 317 8 33 chr2 117311219 117311339 -133376515 + L2 LINE L2 3156 3272 0 201 161 36 18 chr2 117311667 117311723 -133376131 + (TTTG)n Simple_repeat Simple_repeat 3 59 0 33 56 0 0 chr2 117312477 117312531 -133375323 + AT_rich Low_complexity Low_complexity 1 54 0 1356 346 39 15 chr2 117312888 117313538 -133374316 + HERV16 LTR ERVL 739 1403 -3593 557 351 60 18 chr2 117313638 117314252 -133373602 + HERV16 LTR ERVL 2901 3646 -2118 308 338 94 0 chr2 117314966 117315126 -133372728 + HERV16 LTR ERVL 4164 4338 -1147 1958 145 0 14 chr2 117315153 117315450 -133372404 - AluSx SINE Alu -19 293 1 202 411 8 16 chr2 117316016 117316145 -133371709 - MIR3 SINE MIR -6 202 75 25 51 0 0 chr2 117316313 117316352 -133371502 + AT_rich Low_complexity Low_complexity 1 39 0 243 186 39 29 chr2 117317543 117317645 -133370209 + (TA)n Simple_repeat Simple_repeat 2 104 0 24 67 0 0 chr2 117318423 117318468 -133369386 + AT_rich Low_complexity Low_complexity 1 45 0 368 275 15 46 chr2 117318576 117318707 -133369147 + L2 LINE L2 3186 3312 -1 1060 171 10 20 chr2 117318952 117319151 -133368703 + AluJo SINE Alu 102 298 -14 7293 41 8 0 chr2 117319264 117320685 -133367169 - L1PA5 LINE L1 0 6154 4730 320 303 62 94 chr2 117321612 117322048 -133365806 + HAL1 LINE L1 827 1248 -1259 184 172 0 0 chr2 117322054 117322083 -133365771 - MIR SINE MIR -185 77 49 27 62 0 0 chr2 117322545 117322593 -133365261 + AT_rich Low_complexity Low_complexity 1 48 0 306 288 98 20 chr2 117322868 117323021 -133364833 + L1M4 LINE L1 2199 2363 -3783 552 326 52 38 chr2 117323251 117323820 -133364034 - L2 LINE L2 -3 3310 2492 2260 143 11 11 chr2 117323989 117324353 -133363501 - THE1B LTR MaLR 0 364 1 10942 122 1 8 chr2 117324357 117325942 -133361912 - THE1B-int LTR MaLR -6 1574 1 1723 178 63 20 chr2 117325942 117326291 -133361563 - THE1B LTR MaLR 0 364 1 27 29 0 0 chr2 117326296 117326330 -133361524 + AT_rich Low_complexity Low_complexity 1 34 0 374 294 130 24 chr2 117326489 117326782 -133361072 + L1M4 LINE L1 2911 3234 -2912 771 217 79 111 chr2 117327032 117327390 -133360464 + MLT1D LTR MaLR 1 346 -159 2609 119 0 8 chr2 117327390 117327768 -133360086 + THE1C LTR MaLR 1 375 0 771 217 79 111 chr2 117327768 117327814 -133360040 + MLT1D LTR MaLR 346 392 -113 262 237 17 0 chr2 117327816 117327875 -133359979 + MLT1D LTR MaLR 446 505 0 2359 82 3 16 chr2 117328413 117328728 -133359126 + AluY SINE Alu 1 311 0 2240 118 7 0 chr2 117328789 117329093 -133358761 + AluSx SINE Alu 1 306 -6 26 74 0 0 chr2 117329179 117329233 -133358621 + AT_rich Low_complexity Low_complexity 1 54 0 591 296 101 49 chr2 117329715 117329890 -133357964 - LTR33A LTR ERVL -8 515 350 243 0 0 0 chr2 117329890 117329917 -133357937 + (GA)n Simple_repeat Simple_repeat 2 28 0 591 296 101 49 chr2 117329917 117330256 -133357598 - LTR33A LTR ERVL -173 350 3 24 0 0 0 chr2 117331490 117331514 -133356340 + AT_rich Low_complexity Low_complexity 1 24 0 352 224 20 102 chr2 117332730 117332877 -133354977 - HAL1 LINE L1 -998 1509 1375 423 279 61 21 chr2 117333020 117333300 -133354554 - HAL1 LINE L1 -1321 1186 896 1282 242 11 36 chr2 117333310 117333606 -133354248 + L1MC3 LINE L1 5460 5747 -2038 2032 194 19 37 chr2 117333606 117333997 -133353857 + MSTB LTR MaLR 3 387 -39 1802 107 0 0 chr2 117333997 117334231 -133353623 - AluY SINE Alu -77 234 1 2032 194 19 37 chr2 117334231 117334271 -133353583 + MSTB LTR MaLR 387 426 0 1282 242 11 36 chr2 117334271 117334333 -133353521 + L1MC3 LINE L1 5747 5809 -1976 359 133 17 0 chr2 117334336 117334396 -133353458 - MLT1A1 LTR MaLR 0 457 397 573 239 116 54 chr2 117334510 117334769 -133353085 - MLT1A1 LTR MaLR -90 275 1 3868 226 52 16 chr2 117334769 117335784 -133352070 + L1MC3 LINE L1 5808 6785 -1000 1621 187 152 8 chr2 117335784 117336158 -133351696 - MSTA LTR MaLR 0 428 1 9220 149 10 36 chr2 117336158 117337778 -133350076 - MSTA-int LTR MaLR 0 1580 3 1464 171 222 8 chr2 117337780 117338131 -133349723 - MSTA LTR MaLR 0 428 3 393 58 0 0 chr2 117338133 117338185 -133349669 + (CA)n Simple_repeat Simple_repeat 1 52 0 3868 226 52 16 chr2 117338185 117338215 -133349639 + L1MC3 LINE L1 6785 6898 -887 2662 196 133 10 chr2 117338220 117338907 -133348947 + L1MC3 LINE L1 6995 7765 -20 940 263 101 23 chr2 117338921 117339316 -133348538 + L1MC4a LINE L1 5428 5853 -1955 290 324 99 42 chr2 117339822 117340205 -133347649 - L2 LINE L2 -600 2714 2310 2175 146 8 3 chr2 117343214 117343570 -133344284 - L1PB3 LINE L1 -3 6151 5794 927 104 7 57 chr2 117343576 117343762 -133344092 - THE1C LTR MaLR 0 375 194 1896 139 12 13 chr2 117343763 117344220 -133343634 + L1P5 LINE L1 5104 5563 -591 6029 217 100 15 chr2 117344223 117347324 -133340530 - L1PBa LINE L1 -2300 4562 1794 234 0 0 0 chr2 117347324 117347350 -133340504 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 6029 217 100 15 chr2 117347350 117349306 -133338548 - L1PBa LINE L1 -5068 1794 6 300 299 23 52 chr2 117349339 117349513 -133338341 - MER90 LTR ERV1 -206 369 201 22 35 0 0 chr2 117349950 117349979 -133337875 + AT_rich Low_complexity Low_complexity 1 29 0 181 370 86 19 chr2 117350137 117350299 -133337555 - L2 LINE L2 -168 3104 2932 2243 86 10 0 chr2 117350986 117351289 -133336565 + AluY SINE Alu 1 306 -5 293 364 42 0 chr2 117351951 117352069 -133335785 - L2 LINE L2 -24 3289 3167 5295 169 43 20 chr2 117352108 117352837 -133335017 + L1MA5A LINE L1 4280 4991 -1306 1808 169 0 25 chr2 117352837 117353151 -133334703 + AluSx SINE Alu 1 306 -6 5295 169 43 20 chr2 117353151 117354393 -133333461 + L1MA5A LINE L1 4991 6293 -4 180 0 0 0 chr2 117354662 117354682 -133333172 + (TTG)n Simple_repeat Simple_repeat 2 21 0 402 257 46 6 chr2 117354879 117355054 -133332800 - L1ME1 LINE L1 -3 6163 5982 346 319 30 41 chr2 117355329 117355498 -133332356 - L1ME LINE L1 -5632 438 272 2274 117 0 0 chr2 117355502 117355811 -133332043 - AluSx SINE Alu -1 311 3 322 298 85 91 chr2 117355934 117356299 -133331555 - L1ME LINE L1 -5602 468 105 2097 207 26 2 chr2 117356299 117356715 -133331139 - MSTB LTR MaLR 0 426 1 322 298 85 91 chr2 117356715 117356809 -133331045 - L1ME LINE L1 -5965 105 12 615 307 42 21 chr2 117357177 117357418 -133330436 - MIR SINE MIR -3 259 14 2049 112 7 10 chr2 117357908 117358204 -133329650 - AluSq SINE Alu -18 295 1 3273 177 41 44 chr2 117359805 117360579 -133327275 + MER70-int LTR ERVL 303 1074 -4269 302 307 40 58 chr2 117360983 117361257 -133326597 + MER66-int LTR ERV1 953 1221 -5901 4558 70 39 6 chr2 117361424 117362509 -133325345 - MER11A LTR ERVK 0 1266 1 256 313 35 26 chr2 117362711 117362826 -133325028 + MER66-int LTR ERV1 1616 1731 -5391 748 319 31 32 chr2 117363383 117363939 -133323915 + MER66-int LTR ERV1 3817 4755 -2758 2017 129 14 0 chr2 117364155 117364442 -133323412 + AluSq SINE Alu 1 291 -22 556 334 35 25 chr2 117364488 117364945 -133322909 + MER66-int LTR ERV1 4754 5059 -2063 514 326 43 48 chr2 117364913 117365352 -133322502 + MER66-int LTR ERV1 7169 7605 -515 * 421 365 5 5 chr2 117366306 117366330 -133321524 + MER70-int LTR ERVL 4520 4543 -480 427 219 55 55 chr2 117366330 117366458 -133321396 + MER66-int LTR ERV1 6079 6206 -470 421 365 5 5 chr2 117366458 117366509 -133321345 + MER70-int LTR ERVL 4542 4722 -301 1297 92 0 0 chr2 117366656 117366819 -133321035 - AluSq SINE Alu -24 289 127 2006 107 3 33 chr2 117366838 117367138 -133320716 - AluSx SINE Alu -21 291 1 587 161 8 0 chr2 117367970 117368088 -133319766 + GA-rich Low_complexity Low_complexity 3 121 0 2274 61 0 64 chr2 117368180 117368510 -133319344 - AluY SINE Alu -2 309 1 240 292 14 0 chr2 117369070 117369142 -133318712 + MER117 DNA MER1_type 76 148 -49 318 266 73 0 chr2 117369343 117369452 -133318402 + MER112 DNA MER1_type 138 254 -6 2411 68 0 31 chr2 117369722 117370043 -133317811 - AluY SINE Alu 0 311 1 300 223 27 164 chr2 117371888 117371906 -133315948 + MER112 DNA MER1_type 3 22 -238 2158 130 0 3 chr2 117371906 117372214 -133315640 + AluSx SINE Alu 1 307 -5 300 223 27 164 chr2 117372214 117372487 -133315367 + MER112 DNA MER1_type 22 254 -6 403 335 95 16 chr2 117372527 117372769 -133315085 + L1ME3A LINE L1 5691 5951 -219 24 0 0 0 chr2 117373017 117373041 -133314813 + AT_rich Low_complexity Low_complexity 1 24 0 328 271 76 28 chr2 117373070 117373214 -133314640 + L1M4 LINE L1 3345 3495 -2651 627 219 45 39 chr2 117373592 117373770 -133314084 - MER58A DNA MER1_type -4 220 42 500 299 64 55 chr2 117373882 117374414 -133313440 - L1ME LINE L1 -375 5795 5259 2302 271 66 20 chr2 117374472 117375518 -133312336 - L1ME LINE L1 -1058 5088 3995 244 274 19 9 chr2 117375572 117375678 -133312176 - L1ME LINE L1 -2157 3989 3883 11171 191 51 18 chr2 117375679 117375718 -133312136 + L1MA4A LINE L1 8 44 -6805 414 0 0 0 chr2 117375718 117375764 -133312090 + (CA)n Simple_repeat Simple_repeat 1 46 0 11171 191 51 18 chr2 117375764 117377950 -133309904 + L1MA4A LINE L1 44 2306 -4543 3840 184 19 3 chr2 117377938 117378935 -133308919 + L1MA4A LINE L1 5647 6666 -339 * 6908 179 24 34 chr2 117379045 117380386 -133307468 + HERVL LTR ERVL 3243 4569 -1195 307 202 0 91 chr2 117380397 117380496 -133307358 + MLT2B2 LTR ERVL 362 451 -64 398 290 0 0 chr2 117380502 117380595 -133307259 + HERVL LTR ERVL 4027 4119 -1535 200 35 35 0 chr2 117380703 117380732 -133307122 + (TA)n Simple_repeat Simple_repeat 1 30 0 323 89 0 0 chr2 117380735 117380780 -133307074 + MLT2B2 LTR ERVL 471 515 0 1669 180 46 61 chr2 117381011 117381405 -133306449 + MLT1B LTR MaLR 1 388 -2 225 281 37 24 chr2 117381677 117381759 -133306095 + MLT1E-int LTR MaLR 760 842 -529 253 269 0 124 chr2 117381928 117382073 -133305781 + MLT1E-int LTR MaLR 1074 1200 -171 1473 279 62 47 chr2 117382229 117382807 -133305047 + MLT1E LTR MaLR 7 593 0 1135 297 65 35 chr2 117382821 117382924 -133304930 + MLT1G LTR MaLR 105 203 -387 1778 103 0 0 chr2 117382924 117383157 -133304697 + AluSg/x SINE Alu 69 301 -9 1135 297 65 35 chr2 117383157 117383487 -133304367 + MLT1G LTR MaLR 203 551 -39 2496 304 99 24 chr2 117383490 117384529 -133303325 + HERVL68 LTR ERVL 2527 3643 -2121 704 248 35 0 chr2 117384551 117384696 -133303158 + HERVL68 LTR ERVL 4190 4339 -1315 237 318 204 25 chr2 117384932 117385133 -133302721 + L2 LINE L2 1861 2097 -1217 528 355 48 12 chr2 117385193 117385441 -133302413 + MIR SINE MIR 2 258 -4 444 361 75 43 chr2 117385540 117386075 -133301779 + L2 LINE L2 2425 2976 -338 328 295 9 0 chr2 117386569 117386681 -133301173 + (TA)n Simple_repeat Simple_repeat 2 114 0 501 247 37 32 chr2 117387394 117387584 -133300270 - L1ME3A LINE L1 -222 5948 5758 329 291 39 39 chr2 117387585 117387767 -133300087 - L1ME3A LINE L1 -580 5582 5401 410 244 67 26 chr2 117387769 117387962 -133299892 - L1ME3A LINE L1 -3200 2946 2746 2645 224 26 6 chr2 117387973 117388517 -133299337 + MER68 LTR ERV1 1 555 -7 560 250 39 73 chr2 117388527 117388759 -133299095 + MER68-int LTR ERV1 4 227 -3964 * 8646 246 63 29 chr2 117388633 117389069 -133298785 + HERVL68 LTR ERVL 60 480 -2557 3740 102 5 11 chr2 117389069 117389626 -133298228 + MER41A LTR ERV1 1 554 0 8646 246 63 29 chr2 117389626 117391983 -133295871 + HERVL68 LTR ERVL 480 3032 -5 757 220 0 42 chr2 117391985 117392066 -133295788 + MER68 LTR ERV1 376 448 -114 1806 197 7 61 chr2 117392066 117392478 -133295376 - MLT1B LTR MaLR 0 390 1 757 220 0 42 chr2 117392478 117392564 -133295290 + MER68 LTR ERV1 448 536 -26 1945 154 18 6 chr2 117393261 117393604 -133294250 + MER47A DNA MER2_type 6 352 -14 207 0 0 0 chr2 117395235 117395258 -133292596 + (A)n Simple_repeat Simple_repeat 1 23 0 196 164 98 49 chr2 117395408 117395469 -133292385 - MER5A DNA MER1_type 0 189 126 305 244 37 0 chr2 117395571 117395653 -133292201 - MLT2B2 LTR ERVL -430 85 1 13194 212 19 24 chr2 117395968 117399883 -133287971 - L1PA16 LINE L1 0 6869 2934 2130 104 0 3 chr2 117399883 117400208 -133287646 - AluY SINE Alu 0 311 1 13194 212 19 24 chr2 117400208 117400553 -133287301 - L1PA16 LINE L1 -3935 2934 2589 1884 158 3 25 chr2 117400553 117400869 -133286985 - AluSx SINE Alu -3 309 1 13194 212 19 24 chr2 117400869 117403572 -133284282 - L1PA16 LINE L1 -4280 2589 1 356 272 58 10 chr2 117403602 117403705 -133284149 - HAL1 LINE L1 -670 1837 1730 488 254 71 115 chr2 117403773 117404510 -133283344 - HAL1 LINE L1 -957 1550 847 499 157 59 49 chr2 117404512 117404614 -133283240 - MLT1F1 LTR MaLR -5 562 460 233 111 0 19 chr2 117404951 117405005 -133282849 + LTR66 LTR ERVL 387 439 -171 354 194 0 0 chr2 117405005 117405077 -133282777 + (CATATA)n Simple_repeat Simple_repeat 4 75 0 2058 136 10 0 chr2 117405105 117405400 -133282454 - AluSx SINE Alu -14 298 1 1723 179 0 4 chr2 117405925 117406205 -133281649 + AluJo SINE Alu 1 279 -33 233 239 60 0 chr2 117407388 117407455 -133280399 - MER103 DNA DNA -68 98 28 7935 215 39 41 chr2 117409267 117410091 -133277763 + L1MCa LINE L1 7 831 -5776 2113 189 28 21 chr2 117410091 117410520 -133277334 + MSTB1 LTR MaLR 1 432 0 7935 215 39 41 chr2 117410520 117412174 -133275680 + L1MCa LINE L1 831 2692 -3915 1819 126 61 16 chr2 117412537 117412914 -133274940 + LTR7 LTR ERV1 1 450 0 8571 167 8 10 chr2 117413166 117415622 -133272232 - L1PA13 LINE L1 -20 6143 3697 1047 162 37 58 chr2 117415617 117415858 -133271996 + L1PA13 LINE L1 3454 3689 -2457 * 290 354 111 25 chr2 117416245 117416640 -133271214 + L2 LINE L2 2520 2948 -366 191 239 193 0 chr2 117416631 117416719 -133271135 + MIR SINE MIR 155 259 -3 * 35 24 0 0 chr2 117417414 117417456 -133270398 + AT_rich Low_complexity Low_complexity 1 42 0 252 261 170 48 chr2 117418771 117418948 -133268906 + MLT1L LTR MaLR 347 546 -69 2176 182 0 18 chr2 117418948 117419333 -133268521 - MLT1C LTR MaLR 0 467 90 303 203 0 0 chr2 117419328 117419392 -133268462 - MLT1C LTR MaLR -157 310 247 * 923 238 92 66 chr2 117419403 117419782 -133268072 - MLT1C LTR MaLR -18 449 61 292 294 73 0 chr2 117421003 117421112 -133266742 - MIR SINE MIR -48 214 98 279 0 0 0 chr2 117421176 117421207 -133266647 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1133 104 141 5 chr2 117421243 117421435 -133266419 + MER41B LTR ERV1 416 633 -2 8435 192 19 3 chr2 117421435 117422968 -133264886 + MSTB1-int LTR MaLR 94 1651 0 723 146 0 0 chr2 117422968 117423078 -133264776 + MSTB1 LTR MaLR 1 110 -318 495 138 25 5 chr2 117423069 117423171 -133264683 + THE1B LTR MaLR 270 364 0 * 271 167 0 39 chr2 117424452 117424530 -133263324 + GA-rich Low_complexity Low_complexity 2 76 0 1727 155 96 56 chr2 117424877 117425252 -133262602 - MLT1B LTR MaLR 0 390 1 374 302 124 37 chr2 117425419 117425767 -133262087 - L1ME4a LINE L1 -83 6038 5661 181 285 179 16 chr2 117426115 117426238 -133261616 + MIR SINE MIR 119 261 -1 817 292 64 19 chr2 117427033 117427567 -133260287 + MLT2E LTR ERVL 19 614 -14 313 319 222 5 chr2 117427891 117428076 -133259778 + MIR SINE MIR 8 232 -30 1396 165 39 93 chr2 117428855 117429242 -133258612 - L1MA7 LINE L1 -24 6267 5902 246 263 38 12 chr2 117429246 117429326 -133258528 + MIR SINE MIR 119 200 -62 1952 256 103 40 chr2 117429348 117430145 -133257709 + L1ME1 LINE L1 5319 6165 -1 294 283 123 57 chr2 117531499 117531905 -133155949 + L1M4 LINE L1 3268 3700 -2446 546 218 55 7 chr2 117532570 117532728 -133155126 - L1MB2 LINE L1 -1 6170 6030 925 244 0 14 chr2 117532961 117533174 -133154680 - L1MB2 LINE L1 -143 6028 5819 339 336 25 10 chr2 117533649 117533824 -133154030 + CT-rich Low_complexity Low_complexity 4 286 0 270 207 0 0 chr2 117535110 117535168 -133152686 + (TA)n Simple_repeat Simple_repeat 2 59 0 22 0 0 0 chr2 117536530 117536552 -133151302 + AT_rich Low_complexity Low_complexity 1 22 0 17060 26 1 1 chr2 117536619 117539453 -133148401 - L1PA4 LINE L1 0 6155 3320 320 271 45 45 chr2 117540191 117540324 -133147530 + MIR SINE MIR 114 246 -16 220 298 0 24 chr2 117542785 117542869 -133144985 + MIR SINE MIR 73 154 -108 2212 111 0 0 chr2 117542929 117543227 -133144627 + AluSq SINE Alu 2 299 -14 23120 60 6 1 chr2 117543229 117546206 -133141648 + L1P LINE L1 7 2998 -3148 1850 169 14 17 chr2 117546660 117547021 -133140833 + MER46B DNA MER2_type 1 235 -1 378 331 96 7 chr2 117547438 117547574 -133140280 + MER5B DNA MER1_type 12 159 -19 2055 208 32 72 chr2 117547858 117547942 -133139912 - MER34C LTR ERV1 -10 575 489 2035 48 8 146 chr2 117547942 117548299 -133139555 + AluY SINE Alu 1 308 -3 2055 208 32 72 chr2 117548299 117548811 -133139043 - MER34C LTR ERV1 -96 489 3 249 33 0 0 chr2 117549224 117549254 -133138600 + (TG)n Simple_repeat Simple_repeat 1 30 0 216 0 0 0 chr2 117549256 117549280 -133138574 + (TA)n Simple_repeat Simple_repeat 2 25 0 651 196 161 0 chr2 117550080 117550248 -133137606 + MER3 DNA MER1_type 1 195 -14 181 391 18 18 chr2 117550549 117550659 -133137195 - MIR SINE MIR -62 146 37 2173 203 66 57 chr2 117550661 117551312 -133136542 + L1MC3 LINE L1 7121 7777 -8 276 336 67 35 chr2 117551439 117551674 -133136180 - MIR SINE MIR 0 262 23 266 132 19 0 chr2 117551919 117551972 -133135882 + (CA)n Simple_repeat Simple_repeat 1 54 0 2458 52 3 0 chr2 117552887 117553178 -133134676 + AluY SINE Alu 5 296 -15 248 0 31 0 chr2 117555462 117555494 -133132360 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 21 57 0 0 chr2 117555600 117555635 -133132219 + AT_rich Low_complexity Low_complexity 1 35 0 1768 173 10 74 chr2 117555915 117555965 -133131889 - MLT1B LTR MaLR 0 390 338 2541 4 0 0 chr2 117555965 117556239 -133131615 - AluYb8 SINE Alu -1 317 44 1768 173 10 74 chr2 117556239 117556605 -133131249 - MLT1B LTR MaLR -52 338 1 367 241 92 0 chr2 117558422 117558509 -133129345 - MER5A DNA MER1_type -86 103 9 245 164 75 0 chr2 117558895 117558962 -133128892 + LTR66 LTR ERVL 371 442 -168 540 310 87 45 chr2 117559062 117559420 -133128434 - L2 LINE L2 0 3313 2941 225 229 16 0 chr2 117559728 117559789 -133128065 + L1MC4 LINE L1 6625 6686 -1356 2264 110 7 0 chr2 117559818 117560128 -133127726 - AluSx SINE Alu 0 312 1 24 53 0 0 chr2 117560561 117560599 -133127255 + AT_rich Low_complexity Low_complexity 1 38 0 382 342 77 4 chr2 117560913 117561147 -133126707 + L2 LINE L2 1748 1998 -1316 255 163 0 0 chr2 117561173 117561216 -133126638 + L2 LINE L2 3269 3311 -2 287 289 14 99 chr2 117562831 117562953 -133124901 + MIR SINE MIR 3 113 -149 1654 161 3 51 chr2 117562953 117563135 -133124719 - AluJb SINE Alu -9 303 141 2268 100 7 0 chr2 117563135 117563426 -133124428 - AluSc SINE Alu -16 293 1 1654 161 3 51 chr2 117563426 117563559 -133124295 - AluJb SINE Alu -171 141 3 287 289 14 99 chr2 117563559 117563578 -133124276 + MIR SINE MIR 113 132 -130 284 70 23 0 chr2 117564676 117564719 -133123135 + (TC)n Simple_repeat Simple_repeat 2 45 0 1093 241 0 36 chr2 117564733 117565011 -133122843 - AluJo SINE Alu -35 277 10 215 241 17 0 chr2 117565502 117565560 -133122294 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 212 289 83 33 chr2 117565614 117565735 -133122119 + L2 LINE L2 3187 3313 0 462 350 107 0 chr2 117567606 117567803 -133120051 + MIR SINE MIR 4 221 -41 229 222 19 0 chr2 117567973 117568027 -133119827 + (TAG)n Simple_repeat Simple_repeat 3 57 0 184 279 49 33 chr2 117568188 117568249 -133119605 + L3 LINE CR1 1501 1562 -15 2117 176 63 5 chr2 117569093 117569491 -133118363 + MSTA LTR MaLR 1 421 -7 530 284 58 58 chr2 117569779 117570040 -133117814 + MLT1I LTR MaLR 149 409 0 180 0 0 0 chr2 117570556 117570576 -133117278 + (CAA)n Simple_repeat Simple_repeat 2 21 0 326 244 17 35 chr2 117571268 117571383 -133116471 + LTR33A LTR ERVL 411 523 0 1463 226 24 6 chr2 117571420 117571757 -133116097 + MER7A DNA MER2_type 2 342 -4 3918 179 35 4 chr2 117571912 117572648 -133115206 - L1MB1 LINE L1 -7 6161 5403 839 76 0 61 chr2 117573753 117573885 -133113969 - L1P5 LINE L1 -505 5646 5523 558 320 66 19 chr2 117573965 117574477 -133113377 - L1M4 LINE L1 -3586 2796 2258 1182 280 50 11 chr2 117574488 117574927 -133112927 - L1ME1 LINE L1 -340 5809 5354 263 81 0 0 chr2 117575072 117575109 -133112745 - L1MB7 LINE L1 -19 6165 6129 652 231 13 49 chr2 117575132 117575357 -133112497 - L1ME1 LINE L1 -1400 4729 4513 747 309 117 28 chr2 117575435 117575998 -133111856 - L1ME1 LINE L1 -4867 1252 640 21 0 0 0 chr2 117576093 117576114 -133111740 + AT_rich Low_complexity Low_complexity 1 21 0 3241 82 0 11 chr2 117577077 117577530 -133110324 - L1PA8 LINE L1 -1 6171 5724 1552 230 32 131 chr2 117578430 117578559 -133109295 - L1MEc LINE L1 -3483 2732 2592 2384 157 48 40 chr2 117578559 117579063 -133108791 - LTR54 LTR ERV1 0 510 3 1552 230 32 131 chr2 117579063 117579217 -133108637 - L1MEc LINE L1 -3623 2592 2424 1999 107 4 0 chr2 117579217 117579480 -133108374 + AluSx SINE Alu 1 264 -48 1552 230 32 131 chr2 117579480 117580179 -133107675 - L1MEc LINE L1 -3791 2424 1657 300 111 0 0 chr2 117580179 117580224 -133107630 + (TA)n Simple_repeat Simple_repeat 1 45 0 1552 230 32 131 chr2 117580224 117580362 -133107492 - L1MEc LINE L1 -4558 1657 1507 2257 109 0 3 chr2 117580362 117580673 -133107181 - AluSx SINE Alu -2 310 1 1552 230 32 131 chr2 117580673 117581389 -133106465 - L1MEc LINE L1 -4708 1507 1116 588 314 6 6 chr2 117581391 117581566 -133106288 - L1MEc LINE L1 -6167 229 55 24 32 0 0 chr2 117581583 117581614 -133106240 + AT_rich Low_complexity Low_complexity 1 31 0 435 322 108 62 chr2 117581997 117582597 -133105257 - L1M4 LINE L1 -1175 4971 4344 32 0 0 0 chr2 117582734 117582766 -133105088 + AT_rich Low_complexity Low_complexity 1 32 0 2295 98 0 7 chr2 117582850 117583155 -133104699 + AluSq SINE Alu 1 303 -10 638 254 42 73 chr2 117583243 117583598 -133104256 - L2 LINE L2 0 3313 2970 2087 92 33 0 chr2 117584012 117584314 -133103540 - AluSg SINE Alu 0 311 1 1563 176 10 7 chr2 117584988 117585277 -133102577 + AluJb SINE Alu 5 294 -18 823 329 90 35 chr2 117586010 117586163 -133101691 - ERVL LTR ERVL -402 5362 5219 1904 121 16 48 chr2 117586163 117586477 -133101377 - AluSx SINE Alu -8 304 1 823 329 90 35 chr2 117586477 117587272 -133100582 - ERVL LTR ERVL -545 5219 4318 1432 340 65 15 chr2 117587507 117588557 -133099297 - ERVL LTR ERVL -1556 3929 2808 637 298 168 18 chr2 117589545 117589938 -133097916 - LTR33 LTR ERVL -69 452 1 281 202 116 70 chr2 117590900 117591029 -133096825 + MER103 DNA DNA 1 135 -31 225 303 126 17 chr2 117592766 117592885 -133094969 - MIR SINE MIR -56 152 21 184 217 0 106 chr2 117594510 117594653 -133093201 + MER5A DNA MER1_type 6 189 0 425 218 53 76 chr2 117594720 117594892 -133092962 - MER5A DNA MER1_type -20 158 1 229 143 0 41 chr2 117596283 117596332 -133091522 + (TTTC)n Simple_repeat Simple_repeat 4 50 0 270 0 0 0 chr2 117596398 117596428 -133091426 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 245 321 132 9 chr2 117598131 117598237 -133089617 + MIR SINE MIR 16 134 -74 2285 104 0 0 chr2 117598237 117598535 -133089319 - AluY SINE Alu -13 298 1 23 54 0 0 chr2 117598670 117598707 -133089147 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr2 117598828 117598860 -133088994 + AT_rich Low_complexity Low_complexity 1 32 0 2183 117 0 3 chr2 117602432 117602740 -133085114 - AluSg SINE Alu -3 307 1 370 140 35 0 chr2 117602802 117602859 -133084995 - 5S rRNA rRNA -62 59 1 204 253 0 0 chr2 117603572 117603647 -133084207 + (TA)n Simple_repeat Simple_repeat 2 76 0 186 43 0 0 chr2 117603660 117603683 -133084171 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 406 363 44 32 chr2 117604581 117604986 -133082868 + L1ME2 LINE L1 35 444 -5952 231 284 72 58 chr2 117605233 117605441 -133082413 + L1ME2 LINE L1 661 871 -5334 771 118 7 15 chr2 117605459 117605594 -133082260 + L1MA4 LINE L1 6167 6300 0 1015 252 21 0 chr2 117605597 117605839 -133082015 - L1ME2 LINE L1 -13 6151 5905 326 217 97 0 chr2 117605843 117605987 -133081867 + L1ME2 LINE L1 885 1044 -5161 * 1472 206 13 0 chr2 117605979 117606289 -133081565 + L1MA5 LINE L1 4811 5124 -1022 1198 196 4 4 chr2 117606290 117606515 -133081339 + L1MA5 LINE L1 5544 5768 -535 2576 177 14 6 chr2 117606614 117607127 -133080727 + L1MA5 LINE L1 5784 6300 0 26 104 0 0 chr2 117607165 117607261 -133080593 + AT_rich Low_complexity Low_complexity 1 96 0 1905 194 33 13 chr2 117607348 117607744 -133080110 - MSTD LTR MaLR 0 396 8 2506 257 86 61 chr2 117607786 117607916 -133079938 + L1ME2 LINE L1 3660 3785 -2446 2006 151 19 40 chr2 117607916 117608288 -133079566 - THE1B LTR MaLR 0 364 1 2506 257 86 61 chr2 117608288 117609919 -133077935 + L1ME2 LINE L1 3785 5461 -770 654 242 8 0 chr2 117609919 117610051 -133077803 + FLAM_C SINE Alu 1 133 0 2506 257 86 61 chr2 117610051 117610275 -133077579 + L1ME2 LINE L1 5461 5678 -553 204 200 0 0 chr2 117610313 117610358 -133077496 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 2236 99 6 10 chr2 117610371 117610685 -133077169 + AluSp SINE Alu 1 313 0 1428 219 96 41 chr2 117610697 117611186 -133076668 + L1ME2 LINE L1 5697 6212 -21 2298 103 0 0 chr2 117611459 117611759 -133076095 + AluSx SINE Alu 4 303 -9 589 193 18 9 chr2 117611765 117611879 -133075975 + FLAM_C SINE Alu 1 115 -18 26 50 0 0 chr2 117611879 117611919 -133075935 + AT_rich Low_complexity Low_complexity 1 40 0 25 31 0 0 chr2 117612411 117612443 -133075411 + AT_rich Low_complexity Low_complexity 1 32 0 356 335 176 22 chr2 117613823 117614322 -133073532 + L2 LINE L2 2133 2708 -606 473 254 42 0 chr2 117616621 117616739 -133071115 - L2 LINE L2 -4 3309 3187 198 0 0 0 chr2 117616740 117616762 -133071092 + (CATA)n Simple_repeat Simple_repeat 3 24 0 280 81 0 0 chr2 117616776 117616813 -133071041 + MADE1 DNA Mariner 3 39 -41 225 0 0 0 chr2 117616888 117616913 -133070941 + (TG)n Simple_repeat Simple_repeat 2 26 0 250 132 59 29 chr2 117616915 117616983 -133070871 - LTR66 LTR ERVL -171 439 370 305 87 0 0 chr2 117616983 117617029 -133070825 - MADE1 DNA Mariner -32 48 3 228 245 19 0 chr2 117617029 117617082 -133070772 + (CATA)n Simple_repeat Simple_repeat 1 54 0 378 98 0 0 chr2 117617082 117617133 -133070721 - MADE1 DNA Mariner -27 53 3 341 257 239 59 chr2 117617150 117617204 -133070650 - L2 LINE L2 -134 3179 3136 2181 154 59 10 chr2 117617204 117617612 -133070242 - MSTA LTR MaLR 0 428 1 341 257 239 59 chr2 117617612 117617914 -133069940 - L2 LINE L2 -177 3136 2787 384 231 0 22 chr2 117618063 117618197 -133069657 + (TA)n Simple_repeat Simple_repeat 1 131 0 356 227 8 42 chr2 117619388 117619507 -133068347 + L1MC4a LINE L1 5723 5837 -1971 485 158 0 5 chr2 117620671 117620763 -133067091 - L1MA3 LINE L1 -187 6113 6023 539 283 69 96 chr2 117621324 117621658 -133066196 - L1ME4a LINE L1 -18 6103 5789 2075 102 7 0 chr2 117621658 117621975 -133065879 - AluSq SINE Alu 0 319 1 539 283 69 96 chr2 117621975 117622233 -133065621 - L1ME4a LINE L1 -332 5789 5526 303 306 25 0 chr2 117622915 117623036 -133064818 - L1ME LINE L1 -430 5691 5568 339 25 0 0 chr2 117624803 117624843 -133063011 + (CA)n Simple_repeat Simple_repeat 2 41 0 364 252 188 28 chr2 117625541 117625759 -133062095 + L1M4 LINE L1 2778 3030 -3116 438 340 117 11 chr2 117625814 117626336 -133061518 + L1M4 LINE L1 3115 3692 -2454 341 277 81 55 chr2 117626563 117626834 -133061020 + L1M4 LINE L1 3812 4089 -2057 2839 47 100 3 chr2 117626906 117627286 -133060568 - L1PA7 LINE L1 -14 6140 5724 210 118 0 0 chr2 117628228 117628262 -133059592 + (CA)n Simple_repeat Simple_repeat 1 34 0 469 200 0 0 chr2 117630413 117630513 -133057341 + L1MB4 LINE L1 6070 6169 -11 26 74 0 0 chr2 117630896 117630950 -133056904 + AT_rich Low_complexity Low_complexity 1 54 0 23 33 0 0 chr2 117631384 117631414 -133056440 + AT_rich Low_complexity Low_complexity 1 30 0 213 262 16 0 chr2 117633773 117633834 -133054020 + CT-rich Low_complexity Low_complexity 3 64 0 636 261 40 50 chr2 117633879 117634101 -133053753 - MIR SINE MIR -38 224 5 255 240 13 0 chr2 117635078 117635153 -133052701 + L1M LINE L1 5347 5422 -699 910 201 6 6 chr2 117635550 117635724 -133052130 - AluSp SINE Alu -138 175 2 2223 243 32 11 chr2 117636180 117636801 -133051053 - L1P LINE L1 -2446 3700 3067 21 0 0 0 chr2 117637395 117637416 -133050438 + AT_rich Low_complexity Low_complexity 1 21 0 1030 304 106 34 chr2 117637424 117638864 -133048990 + L1MEc LINE L1 100 1453 -4764 346 233 90 23 chr2 117638967 117639100 -133048754 + L1MEc LINE L1 2944 3085 -3130 2142 278 123 35 chr2 117639108 117639728 -133048126 + L1MEc LINE L1 3008 3572 -2643 2466 62 0 7 chr2 117639728 117640034 -133047820 + AluY SINE Alu 1 304 -7 2142 278 123 35 chr2 117640034 117640840 -133047014 + L1MEc LINE L1 3572 4559 -1656 310 283 20 0 chr2 117640850 117640949 -133046905 + (TA)n Simple_repeat Simple_repeat 1 101 0 234 167 31 146 chr2 117640949 117640965 -133046889 + L1MEc LINE L1 4593 4609 -1606 2772 3 3 0 chr2 117640965 117641271 -133046583 - AluYb8 SINE Alu -11 307 1 234 167 31 146 chr2 117641271 117641350 -133046504 + L1MEc LINE L1 4609 4677 -1538 417 234 0 8 chr2 117641393 117641517 -133046337 - L1MEc LINE L1 -5236 1160 1038 268 245 38 38 chr2 117641615 117641721 -133046133 - L1MEc LINE L1 -5557 839 734 222 360 58 0 chr2 117641809 117641895 -133045959 - L2 LINE L2 -674 2640 2550 773 319 4 9 chr2 117642993 117643219 -133044635 + MIR SINE MIR 8 232 -30 23 33 0 0 chr2 117643266 117643296 -133044558 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 117643338 117643360 -133044494 + AT_rich Low_complexity Low_complexity 1 22 0 263 125 0 231 chr2 117644315 117644419 -133043435 + MADE1 DNA Mariner 1 80 0 22 0 0 0 chr2 117644964 117644986 -133042868 + AT_rich Low_complexity Low_complexity 1 22 0 201 196 0 0 chr2 117647305 117647356 -133040498 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 250 337 128 31 chr2 117647610 117647806 -133040048 - MIR SINE MIR -1 261 47 2334 88 3 0 chr2 117648416 117648713 -133039141 + AluSg SINE Alu 1 298 -12 43 0 0 0 chr2 117649114 117649157 -133038697 + AT_rich Low_complexity Low_complexity 1 43 0 1955 142 3 6 chr2 117649334 117649645 -133038209 - AluY SINE Alu -1 310 1 246 322 11 0 chr2 117650122 117650212 -133037642 + CT-rich Low_complexity Low_complexity 3 93 0 33 25 0 0 chr2 117650226 117650266 -133037588 + AT_rich Low_complexity Low_complexity 1 40 0 299 181 24 24 chr2 117650762 117650845 -133037009 - MER67D LTR ERV1 0 514 432 542 157 17 43 chr2 117650876 117650991 -133036863 - MER67D LTR ERV1 -402 112 1 648 294 63 13 chr2 117654793 117655031 -133032823 - MIR SINE MIR -5 257 8 433 347 63 17 chr2 117655994 117656173 -133031681 - MIR SINE MIR -48 214 30 392 233 217 8 chr2 117656387 117656516 -133031338 + MER5A DNA MER1_type 33 188 -1 3471 171 38 27 chr2 117657075 117657784 -133030070 + MER50 LTR ERV1 4 720 -14 2150 118 0 0 chr2 117658490 117658787 -133029067 - AluSq SINE Alu -16 297 1 354 23 0 0 chr2 117659059 117659102 -133028752 + (TTTTG)n Simple_repeat Simple_repeat 4 46 0 290 308 75 23 chr2 117659689 117659873 -133027981 - MIR SINE MIR -8 254 59 2219 186 21 5 chr2 117660572 117660991 -133026863 + MSTB LTR MaLR 1 426 0 1558 194 55 40 chr2 117661135 117661557 -133026297 - MSTC LTR MaLR 0 428 1 3253 196 46 42 chr2 117661856 117662720 -133025134 - L1MB8 LINE L1 -17 6161 5293 3657 161 36 7 chr2 117662731 117663434 -133024420 - L1MA4 LINE L1 -5 7357 6635 9501 214 102 17 chr2 117663455 117664479 -133023375 - L1MA4 LINE L1 -743 6465 5529 1839 138 53 0 chr2 117664479 117664762 -133023092 - AluSx SINE Alu -14 298 1 9501 214 102 17 chr2 117664762 117665696 -133022158 - L1MA4 LINE L1 -1679 5529 4675 944 133 26 0 chr2 117665696 117665847 -133022007 - L1PA10 LINE L1 0 6168 6014 9501 214 102 17 chr2 117665847 117668640 -133019214 - L1MA4 LINE L1 -2533 4675 1329 4902 240 55 44 chr2 117668678 117670442 -133017412 - L1MB8 LINE L1 -860 5286 3503 1379 372 30 8 chr2 117670452 117671178 -133016676 - L2 LINE L2 -628 2686 1945 1418 258 29 15 chr2 117671261 117671715 -133016139 - L1M4 LINE L1 -1989 4157 3698 234 238 36 24 chr2 117672393 117672477 -133015377 - L1MC/D LINE L1 -1911 5897 5813 621 319 114 19 chr2 117672530 117672960 -133014894 - L1M4 LINE L1 -1542 4604 4134 24 0 0 0 chr2 117673332 117673356 -133014498 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 117673392 117673413 -133014441 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 117673542 117673573 -133014281 + AT_rich Low_complexity Low_complexity 1 31 0 2795 227 31 30 chr2 117673769 117673951 -133013903 + Charlie1 DNA MER1_type 1399 1579 -1182 2067 116 3 3 chr2 117673951 117674253 -133013601 - AluSg SINE Alu -8 302 1 2795 227 31 30 chr2 117674253 117674850 -133013004 + Charlie1 DNA MER1_type 1579 2179 -582 1771 150 48 46 chr2 117675123 117675496 -133012358 - THE1C LTR MaLR 0 375 2 943 76 35 7 chr2 117675859 117676004 -133011850 - L1PA13 LINE L1 0 6163 6015 215 181 14 56 chr2 117677025 117677097 -133010757 + GA-rich Low_complexity Low_complexity 1 69 0 1012 126 0 0 chr2 117677635 117677786 -133010068 + L1PA7 LINE L1 6000 6150 -4 194 303 0 45 chr2 117679389 117679455 -133008399 + MIR3 SINE MIR 144 206 -2 587 349 52 64 chr2 117680389 117680778 -133007076 - MLT1K LTR MaLR -131 457 72 2241 112 3 0 chr2 117680778 117681090 -133006764 + AluSq SINE Alu 1 313 0 587 349 52 64 chr2 117681090 117681139 -133006715 - MLT1K LTR MaLR -516 72 24 26 0 0 0 chr2 117681693 117681719 -133006135 + AT_rich Low_complexity Low_complexity 1 26 0 457 293 0 0 chr2 117681719 117681825 -133006029 - MER21B LTR ERV1 -453 410 305 684 311 92 25 chr2 117682232 117682589 -133005265 + L2 LINE L2 2190 2570 -744 2023 129 0 16 chr2 117682752 117683062 -133004792 - AluSc SINE Alu -4 305 1 245 231 31 0 chr2 117683251 117683316 -133004538 + (TATG)n Simple_repeat Simple_repeat 1 67 0 2188 98 30 0 chr2 117684588 117684885 -133002969 + AluSc SINE Alu 1 306 -3 1420 160 58 22 chr2 117685841 117686116 -133001738 - AluJb SINE Alu -27 285 1 1108 53 0 0 chr2 117686455 117686625 -133001229 + L1PA8 LINE L1 6019 6188 0 361 139 38 0 chr2 117687019 117687098 -133000756 + CT-rich Low_complexity Low_complexity 3 84 0 1273 210 38 74 chr2 117688048 117688210 -132999644 + MLT1B LTR MaLR 14 180 -210 2017 157 0 0 chr2 117688210 117688516 -132999338 - AluSx SINE Alu -6 306 1 1273 210 38 74 chr2 117688516 117688744 -132999110 + MLT1B LTR MaLR 180 390 0 2045 281 88 37 chr2 117689144 117690238 -132997616 - L2 LINE L2 -8 3305 2142 859 276 65 43 chr2 117691109 117691478 -132996376 - L2 LINE L2 0 3313 2937 3140 196 81 15 chr2 117692050 117692719 -132995135 - L1MC3 LINE L1 -20 7765 7043 546 119 0 0 chr2 117692719 117692803 -132995051 + (TCTG)n Simple_repeat Simple_repeat 3 86 0 3140 196 81 15 chr2 117692803 117692858 -132994996 - L1MC3 LINE L1 -742 7043 6993 237 250 0 0 chr2 117693356 117693408 -132994446 + L1MC3 LINE L1 5445 5496 -2312 2039 123 7 3 chr2 117693567 117693859 -132993995 + AluSx SINE Alu 16 308 -4 194 0 0 37 chr2 117694136 117694163 -132993691 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1927 127 0 34 chr2 117694166 117694457 -132993397 - AluSx SINE Alu -31 281 1 2788 221 11 33 chr2 117694706 117695411 -132992443 + L1MC3 LINE L1 7088 7777 -8 447 184 8 80 chr2 117695580 117695705 -132992149 + L1MC4a LINE L1 6443 6558 -1250 325 255 12 81 chr2 117695699 117695860 -132991994 + L1MC4 LINE L1 7505 7654 -388 * 234 0 0 0 chr2 117695985 117696011 -132991843 + (CA)n Simple_repeat Simple_repeat 2 27 0 221 171 0 0 chr2 117696193 117696234 -132991620 + T-rich Low_complexity Low_complexity 1 41 0 841 160 0 21 chr2 117696445 117696688 -132991166 + CT-rich Low_complexity Low_complexity 1 237 0 21 0 0 0 chr2 117696787 117696808 -132991046 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 117697017 117697044 -132990810 + AT_rich Low_complexity Low_complexity 1 27 0 478 258 8 0 chr2 117697921 117698045 -132989809 + L1MB5 LINE L1 2669 2793 -3353 29419 118 15 68 chr2 117698063 117704561 -132983293 - L1PA7 LINE L1 -4 6150 10 2992 261 38 26 chr2 117704572 117705790 -132982064 + L1MB5 LINE L1 2778 4009 -2137 2820 189 40 72 chr2 117705921 117706715 -132981139 + L1MC3 LINE L1 7009 7777 -8 2322 83 3 20 chr2 117707577 117707879 -132979975 + AluSp SINE Alu 4 300 -13 582 323 145 19 chr2 117708008 117708380 -132979474 - L2 LINE L2 -4 3309 2891 2253 108 0 13 chr2 117708512 117708826 -132979028 - AluSg SINE Alu 0 310 1 288 303 162 0 chr2 117708920 117709019 -132978835 + L1ME3A LINE L1 6029 6143 -27 275 302 9 19 chr2 117709741 117709847 -132978007 + CT-rich Low_complexity Low_complexity 4 108 0 1505 217 13 7 chr2 117711416 117711446 -132976408 - AluJo SINE Alu 0 438 410 642 26 0 0 chr2 117711446 117711522 -132976332 + (TTCC)n Simple_repeat Simple_repeat 1 76 0 1505 217 13 7 chr2 117711522 117711852 -132976002 - AluJo SINE Alu -28 410 1 25 0 0 0 chr2 117712093 117712118 -132975736 + AT_rich Low_complexity Low_complexity 1 25 0 256 276 43 52 chr2 117712335 117712451 -132975403 + MER89-int LTR ERV1 3614 3728 -3073 1217 241 20 55 chr2 117712516 117712860 -132974994 + MLT1B LTR MaLR 59 390 0 296 265 108 10 chr2 117712879 117712981 -132974873 + MER89-int LTR ERV1 6402 6513 -288 2328 89 0 13 chr2 117715075 117715388 -132972466 - AluSc SINE Alu 0 309 1 560 169 176 0 chr2 117715741 117715889 -132971965 - MER3 DNA MER1_type -19 190 17 1085 67 0 8 chr2 117716067 117716201 -132971653 + AluSq/x SINE Alu 1 133 -179 2383 62 0 20 chr2 117716205 117716510 -132971344 + AluY SINE Alu 1 299 -12 500 241 52 90 chr2 117716963 117717308 -132970546 + L1MB5 LINE L1 4485 4816 -1330 366 23 0 0 chr2 117717764 117717807 -132970047 + (TG)n Simple_repeat Simple_repeat 2 44 0 821 144 34 27 chr2 117717809 117717955 -132969899 - LTR40b LTR ERVL -9 453 307 1104 44 0 0 chr2 117718055 117718192 -132969662 + L1PA6 LINE L1 6011 6147 -7 5277 206 45 7 chr2 117718196 117720008 -132967846 + L1MC1 LINE L1 4379 6255 -78 1889 243 30 30 chr2 117720008 117720445 -132967409 - MLT2B3 LTR ERVL 0 554 118 1035 97 0 0 chr2 117720450 117720584 -132967270 - AluSp/q SINE Alu -13 300 167 1373 270 88 41 chr2 117720686 117720853 -132967001 + L1M4 LINE L1 4178 4336 -1810 1442 204 90 49 chr2 117720853 117721319 -132966535 - MER31A LTR ERV1 0 485 1 1373 270 88 41 chr2 117721319 117722044 -132965810 + L1M4 LINE L1 4336 5112 -1034 1301 261 106 12 chr2 117722073 117722647 -132965207 - L1MEc LINE L1 -5232 1164 537 1414 226 49 7 chr2 117722687 117723171 -132964683 + L1MB5 LINE L1 4977 5486 -688 1836 120 14 4 chr2 117723171 117723447 -132964407 + AluSc SINE Alu 30 308 -1 661 146 0 15 chr2 117723496 117723626 -132964228 + (GGAA)n Simple_repeat Simple_repeat 2 129 0 1122 264 41 24 chr2 117723628 117723737 -132964117 + L1MB5 LINE L1 5497 5603 -571 1745 174 7 19 chr2 117723737 117724047 -132963807 + AluJo SINE Alu 1 306 -6 2434 57 10 0 chr2 117724052 117724348 -132963506 + AluY SINE Alu 7 305 -6 1122 264 41 24 chr2 117724348 117724691 -132963163 + L1MB5 LINE L1 5606 5963 -211 181 368 0 0 chr2 117725609 117725677 -132962177 + MIR SINE MIR 86 153 -109 344 384 7 0 chr2 117726711 117726857 -132960997 - MIR3 SINE MIR -19 189 43 245 323 95 38 chr2 117727049 117727207 -132960647 + MER5A DNA MER1_type 18 184 -5 22 35 0 0 chr2 117727294 117727323 -132960531 + AT_rich Low_complexity Low_complexity 1 29 0 291 345 47 23 chr2 117727394 117727565 -132960289 - MIR3 SINE MIR -7 201 27 447 92 0 0 chr2 117727622 117727687 -132960167 + (CAG)n Simple_repeat Simple_repeat 1 65 0 21884 32 4 0 chr2 117727843 117731269 -132956585 - L1PA4 LINE L1 -3 6152 2716 489 208 47 0 chr2 117731272 117731378 -132956476 + MER5A DNA MER1_type 79 189 0 1874 188 127 0 chr2 117731802 117732211 -132955643 + LTR54B LTR ERV1 17 477 -21 277 348 22 11 chr2 117732225 117732317 -132955537 + MIR SINE MIR 17 109 -153 22 0 0 0 chr2 117732338 117732360 -132955494 + AT_rich Low_complexity Low_complexity 1 22 0 1896 176 0 0 chr2 117732616 117732928 -132954926 + AluSx SINE Alu 1 312 0 2161 117 0 3 chr2 117733162 117733452 -132954402 - AluSg SINE Alu -21 289 1 950 259 18 4 chr2 117733558 117733836 -132954018 + L1MC1 LINE L1 3805 4086 -2060 814 184 8 127 chr2 117734355 117734599 -132953255 + MER20 DNA MER1_type 1 215 -4 274 250 68 0 chr2 117734747 117734835 -132953019 + L1ME3A LINE L1 5858 5951 -219 321 341 108 6 chr2 117735537 117735713 -132952141 + MIR SINE MIR 56 249 -13 846 130 8 0 chr2 117736028 117736151 -132951703 + FLAM_C SINE Alu 1 124 -19 2245 112 0 6 chr2 117736172 117736484 -132951370 + AluSg SINE Alu 1 310 0 4747 191 26 30 chr2 117736496 117737512 -132950342 + L1MC1 LINE L1 5314 6325 -8 551 261 40 17 chr2 117738181 117738357 -132949497 + LTR41 LTR ERVL 11 190 -583 2962 123 51 6 chr2 117738593 117739081 -132948773 + MER9 LTR ERVK 2 511 0 229 262 48 0 chr2 117739199 117739283 -132948571 + LTR50 LTR ERVL 705 792 -3 1912 123 15 0 chr2 117739436 117739705 -132948149 - AluSx SINE Alu -18 294 22 1869 131 21 3 chr2 117740546 117740836 -132947018 + AluY SINE Alu 1 295 -16 522 289 104 41 chr2 117741959 117742462 -132945392 + L1MC4a LINE L1 5406 5591 -651 3650 187 14 25 chr2 117742904 117743614 -132944240 - MER4D LTR ERV1 0 903 202 2593 189 16 86 chr2 117743632 117744188 -132943666 - LTR9 LTR ERV1 -13 599 92 2293 93 7 3 chr2 117744188 117744498 -132943356 - AluSp SINE Alu 0 313 3 2593 189 16 86 chr2 117744498 117744583 -132943271 - LTR9 LTR ERV1 -520 92 3 1046 178 15 15 chr2 117744587 117744784 -132943070 - MER49 LTR ERV1 -726 197 1 805 219 19 48 chr2 117744792 117745002 -132942852 + MIR SINE MIR 59 262 0 1896 198 97 63 chr2 117745763 117746102 -132941752 - MER92B LTR ERV1 -9 627 256 2356 200 46 13 chr2 117746102 117746643 -132941211 - MER89 LTR ERV1 0 559 1 1896 198 97 63 chr2 117746643 117746909 -132940945 - MER92B LTR ERV1 -380 256 1 214 165 33 55 chr2 117747001 117747092 -132940762 + (TA)n Simple_repeat Simple_repeat 1 89 0 247 121 55 44 chr2 117747139 117747230 -132940624 + (TA)n Simple_repeat Simple_repeat 1 92 0 2565 86 5 19 chr2 117747250 117747624 -132940230 - L1PB1 LINE L1 -1 6150 5782 555 162 0 0 chr2 117747631 117747730 -132940124 + (CA)n Simple_repeat Simple_repeat 2 100 0 2141 121 3 3 chr2 117747746 117748044 -132939810 - AluSq SINE Alu -15 298 1 857 98 0 0 chr2 117748050 117748162 -132939692 - AluSg/x SINE Alu -17 293 182 5192 176 33 34 chr2 117748162 117749383 -132938471 - L1PB1 LINE L1 -364 5787 4575 2625 96 3 0 chr2 117749383 117749737 -132938117 + THE1A LTR MaLR 1 355 0 5192 176 33 34 chr2 117749737 117750296 -132937558 - L1PB1 LINE L1 -1576 4575 4017 5435 170 23 22 chr2 117750303 117751365 -132936489 - L1MC1 LINE L1 -17 6596 5534 550 172 198 72 chr2 117751367 117751658 -132936196 + MSTD LTR MaLR 1 396 0 1848 258 22 4 chr2 117751800 117752354 -132935500 - L1MC1 LINE L1 -1221 5205 4642 306 134 0 65 chr2 117752455 117752529 -132935325 - Alu SINE Alu -2 299 242 2862 255 24 20 chr2 117752533 117753104 -132934750 - L1MC1 LINE L1 -2962 3464 2884 1334 202 26 80 chr2 117753104 117753490 -132934364 - MLT1A1 LTR MaLR 0 365 1 2862 255 24 20 chr2 117753490 117754009 -132933845 - L1MC1 LINE L1 -3542 2884 2369 4891 195 36 72 chr2 117754087 117754492 -132933362 - L1MC1 LINE L1 -5138 1288 870 182 62 31 0 chr2 117754492 117754524 -132933330 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4891 195 36 72 chr2 117754524 117755425 -132932429 - L1MC1 LINE L1 -5556 870 29 387 0 0 0 chr2 117755488 117755531 -132932323 + (TG)n Simple_repeat Simple_repeat 2 44 0 2191 113 3 0 chr2 117756340 117756640 -132931214 + AluSq SINE Alu 1 301 -12 209 203 47 0 chr2 117756828 117756892 -132930962 + (TA)n Simple_repeat Simple_repeat 1 67 0 730 294 102 53 chr2 117757469 117757881 -132929973 + LTR16C LTR ERVL 42 473 -18 198 0 0 0 chr2 117758959 117758981 -132928873 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7542 20 14 0 chr2 117758981 117760003 -132927851 - L1PA4 LINE L1 -18 6137 5118 999 201 13 27 chr2 117760822 117761041 -132926813 - MER31A LTR ERV1 0 485 270 1611 182 27 0 chr2 117761041 117761338 -132926516 - MER84 LTR ERVI -2 505 201 872 211 6 0 chr2 117762185 117762346 -132925508 + FAM SINE Alu 1 162 -13 45 19 0 0 chr2 117766877 117766929 -132920925 + AT_rich Low_complexity Low_complexity 1 52 0 2026 139 33 14 chr2 117767288 117767656 -132920198 + THE1C LTR MaLR 1 375 0 858 249 97 61 chr2 117768186 117768547 -132919307 - MLT1A2 LTR MaLR 0 374 1 240 211 39 0 chr2 117768741 117768793 -132919061 - L2 LINE L2 0 3272 3219 274 349 102 12 chr2 117768827 117768993 -132918861 + MIR SINE MIR 46 226 -36 242 243 14 14 chr2 117770682 117770756 -132917098 - MLT1K LTR MaLR -4 584 511 4792 101 8 1 chr2 117770866 117771568 -132916286 - L1P LINE L1 -773 5373 4667 727 82 0 0 chr2 117771584 117771682 -132916172 + L1PA8 LINE L1 5665 5762 -392 995 132 6 0 chr2 117771784 117771943 -132915911 + L1PA8 LINE L1 5740 5899 -273 5045 89 8 1 chr2 117771944 117772650 -132915204 - L1P LINE L1 -1478 4668 3958 4341 65 3 3 chr2 117772650 117773218 -132914636 + L1PA7 LINE L1 5583 6151 -3 991 202 6 0 chr2 117773383 117773556 -132914298 - AluSg/x SINE Alu -8 304 131 452 286 54 39 chr2 117774113 117774316 -132913538 - MIR SINE MIR -10 252 47 4684 177 23 46 chr2 117775031 117776561 -132911293 - L1MA4 LINE L1 -3 6297 4810 10025 221 25 10 chr2 117776568 117778607 -132909247 + ERVL-C1 LTR ERVL 2299 4368 -1396 1963 143 3 26 chr2 117778677 117778985 -132908869 - AluSg SINE Alu -9 301 1 8695 117 12 12 chr2 117779025 117780239 -132907615 - HSMAR1 DNA Mariner 0 1287 71 2381 75 0 3 chr2 117780239 117780546 -132907308 - AluY SINE Alu -5 306 1 8695 117 12 12 chr2 117780546 117780587 -132907267 - HSMAR1 DNA Mariner -1215 72 32 36243 96 16 10 chr2 117780699 117786342 -132901512 - L1P2 LINE L1 -470 5684 11 1093 249 40 45 chr2 117786382 117786779 -132901075 - L1M4 LINE L1 -1789 4357 3963 3050 228 108 14 chr2 117786783 117787175 -132900679 + ERVL-C1 LTR ERVL 4841 5195 -569 195 42 0 0 chr2 117787175 117787199 -132900655 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3050 228 108 14 chr2 117787199 117787638 -132900216 + ERVL-C1 LTR ERVL 5195 5750 -14 245 241 17 0 chr2 117787643 117787701 -132900153 + MLT2C1 LTR ERVL 1 59 -405 471 163 0 0 chr2 117787708 117787788 -132900066 + MADE1 DNA Mariner 1 80 0 1056 227 52 16 chr2 117787794 117788045 -132899809 + MLT2C1 LTR ERVL 71 330 -67 206 333 0 0 chr2 117788068 117788137 -132899717 + (CA)n Simple_repeat Simple_repeat 2 70 0 2435 263 33 63 chr2 117788145 117788599 -132899255 - L1MDb LINE L1 -1804 4602 4136 1679 154 33 0 chr2 117788599 117788872 -132898982 - AluSx SINE Alu -30 282 1 2435 263 33 63 chr2 117788872 117789777 -132898077 - L1MDb LINE L1 -2270 4136 3284 4187 196 36 27 chr2 117789840 117790178 -132897676 - L1MA9 LINE L1 -40 6988 6655 2280 152 83 2 chr2 117790178 117790574 -132897280 - MSTA LTR MaLR 0 428 1 4187 196 36 27 chr2 117790574 117791420 -132896434 - L1MA9 LINE L1 -373 6655 5818 1482 199 23 19 chr2 117791420 117791727 -132896127 + AluJb SINE Alu 1 308 -4 38 22 0 0 chr2 117791695 117791740 -132896114 + AT_rich Low_complexity Low_complexity 1 45 0 * 4187 196 36 27 chr2 117791727 117792268 -132895586 - L1MA9 LINE L1 -1210 5818 5252 4280 240 96 27 chr2 117792296 117792973 -132894881 - L1MDb LINE L1 -3243 3163 2534 1766 143 54 51 chr2 117792973 117793309 -132894545 - MER1B DNA MER1_type 0 337 1 4280 240 96 27 chr2 117793309 117794773 -132893081 - L1MDb LINE L1 -3872 2534 744 423 0 0 0 chr2 117794773 117794820 -132893034 + (TG)n Simple_repeat Simple_repeat 2 48 0 4280 240 96 27 chr2 117794820 117795610 -132892244 - L1MDb LINE L1 -5662 744 10 202 267 17 17 chr2 117796644 117796704 -132891150 + GA-rich Low_complexity Low_complexity 6 65 0 556 291 106 4 chr2 117796973 117797248 -132890606 - LTR33A LTR ERVL -8 515 213 304 137 0 0 chr2 117798820 117798871 -132888983 - L1PB3 LINE L1 -5 6149 6099 * 8115 198 19 15 chr2 117798869 117800860 -132886994 - L1P5 LINE L1 -425 5729 3729 186 71 0 0 chr2 117800860 117800888 -132886966 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8115 198 19 15 chr2 117800888 117801273 -132886581 - L1P5 LINE L1 -2425 3729 3347 6330 221 58 33 chr2 117801380 117806238 -132881616 - L1MA9 LINE L1 -2261 4601 551 4078 46 4 2 chr2 117806238 117806741 -132881113 - L1PA4 LINE L1 0 6155 5652 6330 221 58 33 chr2 117806741 117807295 -132880559 - L1MA9 LINE L1 -6311 551 12 485 262 101 6 chr2 117807394 117807566 -132880288 - MLT1A2 LTR MaLR -2 465 201 563 269 66 22 chr2 117807621 117807803 -132880051 - MLT1A2 LTR MaLR -184 190 1 233 347 93 27 chr2 117807902 117808052 -132879802 + L2 LINE L2 2879 3038 -275 4174 128 58 73 chr2 117809838 117810716 -132877138 - L1MA2 LINE L1 0 7723 6859 5803 173 19 4 chr2 117810910 117812051 -132875803 - L1MA2 LINE L1 -1235 6330 5173 2962 224 29 3 chr2 117812048 117812781 -132875073 - L1MA2 LINE L1 -3067 4498 3747 * 2062 193 70 0 chr2 117812781 117813181 -132874673 + MSTA LTR MaLR 1 428 0 8098 181 14 67 chr2 117813181 117813529 -132874325 + MSTA-int LTR MaLR 1 366 -1285 3996 38 0 0 chr2 117813529 117814006 -132873848 + L1PA5 LINE L1 5665 6141 -13 8098 181 14 67 chr2 117814006 117815186 -132872668 + MSTA-int LTR MaLR 366 1428 -223 5097 71 7 0 chr2 117815186 117815860 -132871994 - L1PA6 LINE L1 0 6154 5476 8098 181 14 67 chr2 117815860 117816073 -132871781 + MSTA-int LTR MaLR 1428 1651 0 1862 193 73 18 chr2 117816080 117816479 -132871375 + MSTA LTR MaLR 8 428 0 10937 137 20 21 chr2 117816479 117816890 -132870964 - L1MA2 LINE L1 -3814 3751 3341 2666 84 22 3 chr2 117816890 117817261 -132870593 - L1PA8A LINE L1 -4 6127 5750 10937 137 20 21 chr2 117817261 117818875 -132868979 - L1MA2 LINE L1 -4224 3341 1725 1319 158 26 9 chr2 117818875 117819103 -132868751 + AluJb SINE Alu 81 312 0 313 238 33 156 chr2 117819104 117819140 -132868714 + MER5A DNA MER1_type 61 100 -89 1088 195 121 85 chr2 117819140 117819587 -132868267 - MLT1C LTR MaLR 0 467 5 313 238 33 156 chr2 117819587 117819672 -132868182 + MER5A DNA MER1_type 100 167 -22 293 115 0 19 chr2 117820589 117820641 -132867213 + (GGGA)n Simple_repeat Simple_repeat 1 51 0 478 295 77 90 chr2 117820641 117821421 -132866433 + L1 LINE L1 3075 3844 -2302 5540 120 8 26 chr2 117821536 117822215 -132865639 - L1PA14 LINE L1 -3 6158 5468 1583 203 3 3 chr2 117822215 117822506 -132865348 - AluJb SINE Alu -14 298 8 5540 120 8 26 chr2 117822506 117822606 -132865248 - L1PA14 LINE L1 -693 5468 5394 1973 127 0 0 chr2 117822606 117822873 -132864981 - AluSg SINE Alu -14 296 30 5540 120 8 26 chr2 117822873 117822978 -132864876 - L1PA14 LINE L1 -767 5394 5289 388 200 0 0 chr2 117823003 117823083 -132864771 - MADE1 DNA Mariner 0 80 1 771 276 64 48 chr2 117823120 117823406 -132864448 - LTR38 LTR ERV1 -22 534 237 2438 94 0 0 chr2 117823406 117823715 -132864139 - AluSc SINE Alu 0 309 1 771 276 64 48 chr2 117823715 117823867 -132863987 - LTR38 LTR ERV1 -319 237 89 221 200 0 22 chr2 117823902 117823947 -132863907 + A-rich Low_complexity Low_complexity 2 45 0 22 35 0 0 chr2 117824320 117824349 -132863505 + AT_rich Low_complexity Low_complexity 1 29 0 560 201 117 109 chr2 117824380 117824728 -132863126 - MLT1H LTR MaLR -5 590 73 23 0 0 0 chr2 117824735 117824758 -132863096 + AT_rich Low_complexity Low_complexity 1 23 0 228 178 0 55 chr2 117824928 117825001 -132862853 + A-rich Low_complexity Low_complexity 6 74 0 2195 91 3 11 chr2 117825011 117825337 -132862517 + AluSx SINE Alu 1 324 0 1158 199 57 71 chr2 117825975 117826272 -132861582 + AluJb SINE Alu 2 294 -8 418 344 80 5 chr2 117826303 117826515 -132861339 - MLT1K LTR MaLR -165 423 196 273 309 114 29 chr2 117826742 117826917 -132860937 + MIR SINE MIR 1 190 -72 1292 258 109 16 chr2 117827599 117828041 -132859813 + MER110 LTR ERV1 2 484 -7 378 0 0 0 chr2 117828367 117828409 -132859445 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 547 262 61 12 chr2 117828775 117828939 -132858915 + MER5B DNA MER1_type 4 175 -3 479 209 11 0 chr2 117828995 117829086 -132858768 - MER5A DNA MER1_type -83 106 15 504 228 16 16 chr2 117829110 117829237 -132858617 + MER5A DNA MER1_type 1 127 -62 223 358 58 25 chr2 117829406 117829526 -132858328 + MIR SINE MIR 18 141 -67 4496 79 7 10 chr2 117830795 117831406 -132856448 + L1PA8 LINE L1 5564 6172 0 180 0 0 0 chr2 117832619 117832639 -132855215 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 1928 137 11 0 chr2 117832639 117832916 -132854938 - AluSx SINE Alu -32 280 1 907 143 0 0 chr2 117832924 117833057 -132854797 - AluSq/x SINE Alu -180 133 1 250 287 163 31 chr2 117834501 117834630 -132853224 + L2 LINE L2 3158 3303 -10 2643 39 0 0 chr2 117834656 117834967 -132852887 - AluY SINE Alu 0 311 1 1570 219 81 18 chr2 117834992 117835435 -132852419 - L1MD3 LINE L1 -29 7966 7496 809 326 104 15 chr2 117835457 117836045 -132851809 - L1MCc LINE L1 -4963 1460 821 267 361 58 7 chr2 117838684 117838839 -132849015 + MIR3 SINE MIR 19 181 -27 24 32 0 0 chr2 117839350 117839381 -132848473 + AT_rich Low_complexity Low_complexity 1 31 0 904 300 101 28 chr2 117839640 117840186 -132847668 - L1ME3A LINE L1 -52 6118 5533 28 0 0 0 chr2 117840219 117840247 -132847607 + AT_rich Low_complexity Low_complexity 1 28 0 357 306 146 36 chr2 117840362 117840663 -132847191 - L1M4 LINE L1 -5301 1241 1039 268 224 0 24 chr2 117840797 117840882 -132846972 + CT-rich Low_complexity Low_complexity 3 85 0 2099 123 13 3 chr2 117840882 117841191 -132846663 - AluSx SINE Alu 0 312 1 918 235 166 22 chr2 117844248 117844567 -132843287 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr2 117845074 117845096 -132842758 + AT_rich Low_complexity Low_complexity 1 22 0 413 0 39 0 chr2 117845404 117845456 -132842398 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 2305 74 0 0 chr2 117845461 117845745 -132842109 - AluY SINE Alu -27 284 1 279 227 0 0 chr2 117845746 117845812 -132842042 + (TA)n Simple_repeat Simple_repeat 2 67 0 259 324 32 82 chr2 117846567 117846848 -132841006 - L2 LINE L2 -179 3093 2827 353 337 123 0 chr2 117847766 117847953 -132839901 + L1MEc LINE L1 36 245 -6151 3013 73 0 0 chr2 117848008 117848390 -132839464 + LTR8 LTR ERV1 203 584 -107 355 145 0 26 chr2 117848392 117848468 -132839386 + (GGAA)n Simple_repeat Simple_repeat 4 77 0 434 271 8 8 chr2 117848529 117848647 -132839207 + L1MEc LINE L1 390 507 -5889 272 0 0 77 chr2 117848651 117848703 -132839151 + (TTC)n Simple_repeat Simple_repeat 1 48 0 297 0 0 0 chr2 117848703 117848736 -132839118 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2732 177 35 11 chr2 117848736 117849283 -132838571 - L1MB5 LINE L1 -11 6163 5604 1780 156 10 3 chr2 117849286 117849587 -132838267 - AluY SINE Alu -2 309 7 812 260 25 32 chr2 117849598 117849879 -132837975 - AluJo SINE Alu -12 300 22 1794 132 38 17 chr2 117949895 117950183 -132737671 + AluSx SINE Alu 1 294 -18 2540 197 48 11 chr2 117950183 117950303 -132737551 + L1MA5 LINE L1 4368 4482 -1818 279 0 0 0 chr2 117950303 117950334 -132737520 + (CA)n Simple_repeat Simple_repeat 2 32 0 2540 197 48 11 chr2 117950334 117951491 -132736363 + L1MA5 LINE L1 4482 5783 -517 2482 66 0 3 chr2 117951491 117951792 -132736062 + AluY SINE Alu 1 300 -11 2540 197 48 11 chr2 117951792 117951921 -132735933 + L1MA5 LINE L1 5783 5906 -394 9863 208 47 25 chr2 117952021 117952644 -132735210 - L1M1 LINE L1 -5376 2189 1582 2016 146 27 29 chr2 117952644 117953020 -132734834 - THE1C LTR MaLR 0 375 1 9863 208 47 25 chr2 117953020 117954387 -132733467 - L1M1 LINE L1 -5983 1582 146 2773 16 0 3 chr2 117954387 117954699 -132733155 + AluYa5 SINE Alu 1 311 0 9863 208 47 25 chr2 117954699 117954832 -132733022 - L1M1 LINE L1 -7419 146 17 729 285 6 6 chr2 117954879 117955058 -132732796 + LTR28 LTR ERV1 1 179 -841 261 0 0 0 chr2 117955298 117955327 -132732527 + (TG)n Simple_repeat Simple_repeat 2 30 0 198 0 0 0 chr2 117955326 117955348 -132732506 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 282 56 0 0 chr2 117955348 117955384 -132732470 + (GA)n Simple_repeat Simple_repeat 1 36 0 211 261 43 123 chr2 117956294 117956432 -132731422 - MIR SINE MIR -12 250 124 22 35 0 0 chr2 117956921 117956950 -132730904 + AT_rich Low_complexity Low_complexity 1 29 0 887 173 96 4 chr2 117956951 117957232 -132730622 + L1MB2 LINE L1 5164 5466 -714 432 189 0 0 chr2 117957233 117957307 -132730547 + MSTC LTR MaLR 1 74 -354 7553 28 0 2 chr2 117957368 117958423 -132729431 + L1PA4 LINE L1 5101 6153 -2 555 116 0 0 chr2 117958423 117958509 -132729345 + L1P5 LINE L1 5596 5681 -475 1236 204 42 15 chr2 117958517 117958782 -132729072 + MSTC LTR MaLR 157 428 0 2925 184 27 42 chr2 117958813 117959480 -132728374 + L1MB2 LINE L1 5476 6132 -39 1116 196 74 29 chr2 117959652 117959964 -132727890 + L1MB8 LINE L1 5843 6168 -10 449 34 17 0 chr2 117959964 117960023 -132727831 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 22 70 0 0 chr2 117961932 117961975 -132725879 + AT_rich Low_complexity Low_complexity 1 43 0 228 329 43 0 chr2 117962820 117962890 -132724964 + MIR SINE MIR 34 106 -102 662 187 54 0 chr2 117963186 117963352 -132724502 - MER63 DNA MER1_type -35 1025 851 245 226 0 0 chr2 117963355 117963408 -132724446 - MER63 DNA MER1_type -336 726 674 264 293 121 10 chr2 117963502 117963601 -132724253 - MIR SINE MIR -69 139 30 2265 132 8 102 chr2 117963628 117964098 -132723756 - MSTC LTR MaLR -2 426 1 22 56 0 0 chr2 117964356 117964392 -132723462 + AT_rich Low_complexity Low_complexity 1 36 0 3468 174 12 17 chr2 117964566 117965434 -132722420 + L1PA16 LINE L1 5008 5872 -294 722 78 0 17 chr2 117965436 117965551 -132722303 - AluY SINE Alu 0 311 199 1934 34 0 8 chr2 117965618 117965853 -132722001 - AluY SINE Alu -78 233 1 1293 201 40 7 chr2 117965853 117966151 -132721703 + L1PA16 LINE L1 5858 6165 -1 2543 55 0 0 chr2 117966615 117966922 -132720932 - AluY SINE Alu -4 307 1 363 92 69 0 chr2 117966987 117967074 -132720780 + (TA)n Simple_repeat Simple_repeat 1 93 0 627 177 77 131 chr2 117967089 117967199 -132720655 + Charlie1 DNA MER1_type 2416 2530 -231 1353 218 21 14 chr2 117967199 117967479 -132720375 + AluJb SINE Alu 1 282 -30 627 177 77 131 chr2 117967479 117967718 -132720136 + Charlie1 DNA MER1_type 2530 2746 -15 270 0 0 0 chr2 117969465 117969495 -132718359 + (CA)n Simple_repeat Simple_repeat 2 31 0 2999 217 53 18 chr2 117969895 117970539 -132717315 - L1MB5 LINE L1 -1 6173 5487 2111 128 0 3 chr2 117970539 117970836 -132717018 - AluSx SINE Alu -16 296 1 2999 217 53 18 chr2 117970836 117971021 -132716833 - L1MB5 LINE L1 -687 5487 5310 1969 172 23 10 chr2 117971029 117971418 -132716436 - L1PA16 LINE L1 -3 6163 5770 307 307 78 19 chr2 117972279 117972484 -132715370 - MIR SINE MIR -26 236 20 2195 141 17 0 chr2 117973593 117973948 -132713906 + MER46B DNA MER2_type 1 236 0 2370 80 0 10 chr2 117974378 117974691 -132713163 - AluSg SINE Alu 0 310 1 205 364 13 0 chr2 117974739 117974816 -132713038 + MER5A DNA MER1_type 86 163 -26 21 0 0 0 chr2 117974941 117974962 -132712892 + AT_rich Low_complexity Low_complexity 1 21 0 259 302 132 22 chr2 117974981 117975163 -132712691 - MIR SINE MIR -5 257 56 782 266 36 36 chr2 117975172 117975424 -132712430 + LTR16A LTR ERVL 1 252 -198 270 265 29 0 chr2 117975448 117975516 -132712338 + LTR16A LTR ERVL 381 450 0 633 297 94 56 chr2 117975622 117976016 -132711838 - LTR16A LTR ERVL -20 430 22 21 0 0 0 chr2 117976193 117976214 -132711640 + AT_rich Low_complexity Low_complexity 1 21 0 633 371 33 23 chr2 117976430 117976915 -132710939 - MERVL LTR ERVL -607 5157 4668 426 344 153 23 chr2 117976960 117977353 -132710501 - MERVL LTR ERVL -1173 4591 4148 225 0 0 0 chr2 117977357 117977382 -132710472 + (T)n Simple_repeat Simple_repeat 1 25 0 2284 134 35 10 chr2 117977672 117978066 -132709788 - Tigger1 DNA MER2_type 0 2418 2015 266 176 81 27 chr2 117978040 117978104 -132709750 - Tigger1 DNA MER2_type -1934 484 414 * 2414 107 8 8 chr2 117978104 117978459 -132709395 + THE1A LTR MaLR 1 355 0 5641 128 170 16 chr2 117978468 117979215 -132708639 + THE1A-int LTR MaLR 10 641 -1010 6643 72 15 0 chr2 117979215 117980488 -132707366 + L1PA7 LINE L1 4868 6153 -1 5641 128 170 16 chr2 117980488 117980968 -132706886 + THE1A-int LTR MaLR 641 1593 -58 1724 154 43 31 chr2 117981077 117981428 -132706426 + THE1A LTR MaLR 1 355 0 2463 157 14 7 chr2 117981428 117981843 -132706011 - Tigger1 DNA MER2_type -2000 418 1 1743 136 81 24 chr2 117982250 117982545 -132705309 - AluSx SINE Alu 0 312 1 366 355 28 0 chr2 117982572 117982786 -132705068 - MERVL LTR ERVL -2986 2499 2280 199 409 31 19 chr2 117983597 117983756 -132704098 - L2 LINE L2 -1 3271 3111 352 247 0 0 chr2 117984094 117984171 -132703683 + L2 LINE L2 3191 3267 -5 23 0 0 0 chr2 117985365 117985388 -132702466 + AT_rich Low_complexity Low_complexity 1 23 0 239 372 0 23 chr2 117985638 117985724 -132702130 + MIR SINE MIR 26 109 -153 2557 50 0 0 chr2 117986614 117986913 -132700941 - AluY SINE Alu -12 299 1 1881 164 3 7 chr2 117987082 117987381 -132700473 - AluJo SINE Alu -14 298 1 21 36 0 0 chr2 117987448 117987476 -132700378 + AT_rich Low_complexity Low_complexity 1 28 0 383 266 93 10 chr2 117987754 117987917 -132699937 - MLT1G LTR MaLR 0 590 426 225 216 29 137 chr2 117988015 117988117 -132699737 - MLT1G LTR MaLR -238 352 262 334 260 154 0 chr2 117988678 117988847 -132699007 + L1MB5 LINE L1 65 259 -6283 550 125 0 0 chr2 117988896 117988976 -132698878 + MER84 LTR ERVI 1 80 -427 2209 152 101 58 chr2 117988979 117989101 -132698753 + MER84 LTR ERVI 1 116 -391 1528 50 55 27 chr2 117989101 117989321 -132698533 - L1PA7 LINE L1 -2 6152 5927 2209 152 101 58 chr2 117989321 117989684 -132698170 + MER84 LTR ERVI 116 507 0 3997 267 73 35 chr2 117989908 117993798 -132694056 + L1MB5 LINE L1 516 4543 -2101 258 219 0 31 chr2 117993791 117993855 -132693999 + L1MA9 LINE L1 959 1020 -6078 * 272 318 11 57 chr2 117994058 117994234 -132693620 + L1MA9 LINE L1 1546 1713 -5455 7704 201 44 22 chr2 117994680 117997984 -132689870 + L1MA9 LINE L1 3954 7333 0 3855 206 32 33 chr2 117997980 117999656 -132688198 + L1MB5 LINE L1 4985 6660 -12 * 30 45 0 0 chr2 117999844 117999888 -132687966 + AT_rich Low_complexity Low_complexity 1 44 0 6612 74 10 1 chr2 118000268 118001940 -132685914 + L1PA7 LINE L1 4469 6150 -4 1549 101 46 81 chr2 118002024 118002372 -132685482 - L1MA8 LINE L1 -13 6278 5943 213 395 27 20 chr2 118002560 118002707 -132685147 - MIR3 SINE MIR -23 185 38 1532 173 36 33 chr2 118003727 118004034 -132683820 - AluJo SINE Alu -4 308 1 29 28 0 0 chr2 118004056 118004092 -132683762 + AT_rich Low_complexity Low_complexity 1 36 0 1787 138 6 63 chr2 118004141 118004489 -132683365 - L1MA6 LINE L1 -617 5683 5356 3076 144 39 33 chr2 118004489 118005097 -132682757 + L1MA6 LINE L1 5684 6300 0 28 22 0 22 chr2 118005324 118005343 -132682511 + AT_rich Low_complexity Low_complexity 1 19 -26 735 196 38 6 chr2 118005343 118005501 -132682353 + L1MC1 LINE L1 6158 6320 -13 28 22 0 22 chr2 118005501 118005527 -132682327 + AT_rich Low_complexity Low_complexity 19 45 0 21 57 0 0 chr2 118005579 118005614 -132682240 + AT_rich Low_complexity Low_complexity 1 35 0 614 323 68 4 chr2 118007097 118007332 -132680522 - MIR SINE MIR -3 259 10 305 329 110 7 chr2 118007953 118008108 -132679746 - MER5B DNA MER1_type 0 178 8 1909 125 5 69 chr2 118008635 118009012 -132678842 - THE1A LTR MaLR 0 355 3 21 0 0 0 chr2 118009270 118009291 -132678563 + AT_rich Low_complexity Low_complexity 1 21 0 571 268 43 0 chr2 118009580 118009718 -132678136 + MER45A DNA AcHobo 28 171 -7 1367 142 0 0 chr2 118011466 118011685 -132676169 - L1MA5 LINE L1 -4 6296 6078 3756 218 67 17 chr2 118011693 118013055 -132674799 + L1M2 LINE L1 2647 4079 -2769 1740 126 4 15 chr2 118013101 118013362 -132674492 + AluSq SINE Alu 51 308 -5 2527 209 7 9 chr2 118013362 118013907 -132673947 + L1M2 LINE L1 4448 4991 -1857 192 96 43 90 chr2 118014105 118014293 -132673561 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 1019 119 21 36 chr2 118014307 118014501 -132673353 + L1MA5 LINE L1 6109 6299 -1 11307 28 1 0 chr2 118015366 118016710 -132671144 - L1PA3 LINE L1 -914 5232 3888 7192 35 3 7 chr2 118016717 118017621 -132670233 + L1PA3 LINE L1 5254 6154 -1 15284 145 20 28 chr2 118017802 118020555 -132667299 - Tigger4(Zombi) DNA MER2_type 0 2731 1 204 260 20 0 chr2 118020914 118020964 -132666890 + L2 LINE L2 3262 3312 -1 205 314 83 50 chr2 118021195 118021316 -132666538 - L2 LINE L2 -940 2374 2250 24 32 0 0 chr2 118021386 118021417 -132666437 + AT_rich Low_complexity Low_complexity 1 31 0 41 21 0 0 chr2 118021505 118021553 -132666301 + AT_rich Low_complexity Low_complexity 1 48 0 1108 282 70 17 chr2 118022360 118022624 -132665230 + L1MCc LINE L1 1042 1291 -5574 2187 80 0 7 chr2 118022624 118022910 -132664944 + AluY SINE Alu 1 284 -27 1108 282 70 17 chr2 118022910 118023462 -132664392 + L1MCc LINE L1 1291 1915 -4950 431 271 73 88 chr2 118023548 118023907 -132663947 + LTR33A LTR ERVL 53 378 -145 546 82 0 0 chr2 118024100 118024185 -132663669 + (TA)n Simple_repeat Simple_repeat 1 85 0 230 0 33 0 chr2 118024255 118024285 -132663569 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 1780 176 46 0 chr2 118024309 118024638 -132663216 - Tigger2 DNA MER2_type -5 2713 2370 792 203 59 25 chr2 118025261 118025463 -132662391 - MER3 DNA MER1_type 0 209 1 309 227 0 0 chr2 118026193 118026268 -132661586 - MER70B LTR ERVL -17 561 487 18642 179 32 23 chr2 118027010 118029131 -132658723 + L1M1 LINE L1 11 2112 -5453 2003 136 13 43 chr2 118029131 118029506 -132658348 - THE1B LTR MaLR 0 364 1 11352 107 6 0 chr2 118029506 118031077 -132656777 - THE1B-int LTR MaLR 0 1580 1 1912 144 16 45 chr2 118031077 118031452 -132656402 - THE1B LTR MaLR 0 364 1 18642 179 32 23 chr2 118031452 118031791 -132656063 + L1M1 LINE L1 2112 2447 -5118 216 0 0 0 chr2 118031791 118031815 -132656039 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 18642 179 32 23 chr2 118031815 118033255 -132654599 + L1M1 LINE L1 2447 3952 -3613 1057 163 54 14 chr2 118033255 118033522 -132654332 - MER61C LTR ERV1 0 434 84 9610 200 16 46 chr2 118033535 118033783 -132654071 + L1M1 LINE L1 3947 4201 -3364 2066 136 7 3 chr2 118033783 118034091 -132653763 + AluSq SINE Alu 1 309 -4 9610 200 16 46 chr2 118034091 118035639 -132652215 + L1M1 LINE L1 4201 5651 -1914 384 22 0 0 chr2 118035639 118035684 -132652170 + (CA)n Simple_repeat Simple_repeat 2 46 0 9610 200 16 46 chr2 118035684 118036379 -132651475 + L1M1 LINE L1 5651 6365 -1200 1314 144 35 8 chr2 118036383 118036639 -132651215 + L1MA3 LINE L1 6043 6305 0 22 70 0 0 chr2 118036639 118036682 -132651172 + AT_rich Low_complexity Low_complexity 1 43 0 194 370 105 17 chr2 118037061 118037242 -132650612 - MIR SINE MIR 0 262 66 5407 102 28 7 chr2 118037774 118038606 -132649248 + L1PA11 LINE L1 5328 6173 -1 428 274 9 88 chr2 118038607 118038822 -132649032 + L1ME3A LINE L1 5813 6010 -160 452 297 20 0 chr2 118039008 118039156 -132648698 + L1ME3A LINE L1 6015 6165 -5 246 292 125 0 chr2 118039190 118039286 -132648568 - MER90 LTR ERV1 -64 550 443 3992 196 50 4 chr2 118039291 118040376 -132647478 - L1MB7 LINE L1 -10 6672 5540 318 115 0 0 chr2 118040420 118040472 -132647382 + (TG)n Simple_repeat Simple_repeat 2 53 0 2405 257 35 20 chr2 118040474 118041195 -132646659 - L1MB7 LINE L1 -1907 4737 4003 1579 173 6 38 chr2 118041195 118041508 -132646346 - AluJb SINE Alu -9 303 1 2405 257 35 20 chr2 118041508 118041540 -132646314 - L1MB7 LINE L1 -2641 4003 3973 3874 138 30 36 chr2 118041606 118042471 -132645383 - L1PA14 LINE L1 -195 5966 5109 * 5662 169 13 19 chr2 118042469 118043549 -132644305 + L1P LINE L1 3509 4581 -1565 264 30 0 0 chr2 118043601 118043634 -132644220 + (TG)n Simple_repeat Simple_repeat 2 34 0 1213 236 14 27 chr2 118043646 118043942 -132643912 - L1MB7 LINE L1 -5789 753 462 350 233 0 19 chr2 118043955 118044058 -132643796 + CT-rich Low_complexity Low_complexity 3 103 0 1256 249 29 55 chr2 118044063 118044517 -132643337 - L1MB7 LINE L1 -6077 465 24 564 303 35 44 chr2 118044555 118044872 -132642982 - MER90 LTR ERV1 -185 390 77 2248 105 0 0 chr2 118045860 118046154 -132641700 + AluSq SINE Alu 1 294 -19 386 330 80 14 chr2 118046218 118046430 -132641424 - MIR SINE MIR -8 254 29 30 59 0 0 chr2 118047062 118047113 -132640741 + AT_rich Low_complexity Low_complexity 1 51 0 231 245 54 102 chr2 118048060 118048207 -132639647 - MIR3 SINE MIR 0 208 69 225 351 0 0 chr2 118048709 118048783 -132639071 - L2 LINE L2 -619 2695 2622 625 291 69 9 chr2 118049254 118049601 -132638253 + L1ME4a LINE L1 5535 5902 -219 1899 124 0 0 chr2 118050381 118050640 -132637214 - AluSc SINE Alu -12 297 39 429 257 71 0 chr2 118050661 118050774 -132637080 + MIR SINE MIR 68 188 -74 203 294 66 59 chr2 118052121 118052257 -132635597 + L2 LINE L2 2971 3107 -165 260 306 113 45 chr2 118052950 118053172 -132634682 + MIR SINE MIR 10 246 -16 2034 144 0 3 chr2 118053500 118053799 -132634055 + AluSx SINE Alu 1 298 -14 427 317 118 21 chr2 118054186 118054517 -132633337 - L2 LINE L2 -1 3312 2950 573 232 31 36 chr2 118054569 118054763 -132633091 + LTR33 LTR ERVL 327 519 -2 28 29 0 0 chr2 118055082 118055117 -132632737 + AT_rich Low_complexity Low_complexity 1 35 0 2942 41 15 0 chr2 118055556 118056137 -132631717 - L1P2 LINE L1 -538 5616 5030 1730 71 0 0 chr2 118056137 118056359 -132631495 + L1PA6 LINE L1 5924 6147 -7 22 35 0 0 chr2 118056361 118056390 -132631464 + AT_rich Low_complexity Low_complexity 1 29 0 630 180 0 0 chr2 118056498 118056609 -132631245 + Tigger3(Golem) DNA MER2_type 143 253 -2776 4081 152 84 10 chr2 118056614 118057415 -132630439 + Tigger3(Golem) DNA MER2_type 2169 3028 -1 493 344 11 16 chr2 118057417 118057603 -132630251 + ERVL LTR ERVL 3330 3514 -2250 968 224 66 45 chr2 118057606 118057958 -132629896 - MLT1C LTR MaLR -85 382 6 381 302 26 0 chr2 118057977 118058093 -132629761 + ERVL LTR ERVL 4527 4645 -1119 1079 264 91 33 chr2 118059198 118060060 -132627794 + L1ME3A LINE L1 4805 5734 -436 1489 230 93 16 chr2 118060060 118060491 -132627363 + MLT1C LTR MaLR 1 464 -3 1079 264 91 33 chr2 118060491 118060627 -132627227 + L1ME3A LINE L1 5734 5861 -309 310 248 135 28 chr2 118060663 118060804 -132627050 + L1ME3A LINE L1 6011 6166 -4 821 237 47 9 chr2 118061187 118061402 -132626452 + L1ME1 LINE L1 5898 6120 -46 277 365 19 9 chr2 118061768 118061875 -132625979 + MIR SINE MIR 14 121 -141 1792 162 82 22 chr2 118063203 118063615 -132624239 - MER61D LTR ERV1 -65 504 1 5272 133 74 103 chr2 118063656 118063982 -132623872 - Tigger3b DNA MER2_type -1798 1230 896 245 50 0 50 chr2 118063982 118064022 -132623832 + (TGAG)n Simple_repeat Simple_repeat 1 38 0 5272 133 74 103 chr2 118064022 118064961 -132622893 - Tigger3b DNA MER2_type -2132 896 1 23 0 0 0 chr2 118065102 118065125 -132622729 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 118065770 118065791 -132622063 + AT_rich Low_complexity Low_complexity 1 21 0 211 233 33 0 chr2 118066022 118066082 -132621772 + (TTG)n Simple_repeat Simple_repeat 2 63 0 420 307 20 27 chr2 118066812 118066962 -132620892 + MIR3 SINE MIR 54 202 -6 372 294 70 28 chr2 118067490 118067763 -132620091 + L1ME3A LINE L1 5625 5907 -286 2283 100 0 3 chr2 118067896 118068206 -132619648 + AluSg SINE Alu 1 309 -1 262 98 39 0 chr2 118068392 118068443 -132619411 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 25 0 0 0 chr2 118068953 118068978 -132618876 + AT_rich Low_complexity Low_complexity 1 25 0 1504 183 29 18 chr2 118068989 118069292 -132618562 + AluJo SINE Alu 1 306 0 408 20 0 0 chr2 118069295 118069344 -132618510 + (CA)n Simple_repeat Simple_repeat 2 50 0 1480 144 30 0 chr2 118069344 118069580 -132618274 - THE1-int LTR MaLR -1191 389 147 23 0 0 0 chr2 118069799 118069822 -132618032 + AT_rich Low_complexity Low_complexity 1 23 0 410 336 195 41 chr2 118070329 118070770 -132617084 + L3 LINE CR1 857 1365 -212 328 317 104 12 chr2 118070800 118070964 -132616890 + MLT1H LTR MaLR 29 207 -342 21 0 0 0 chr2 118071507 118071528 -132616326 + AT_rich Low_complexity Low_complexity 1 21 0 680 212 0 0 chr2 118071582 118071719 -132616135 + FLAM_C SINE Alu 1 137 -6 581 264 51 28 chr2 118071806 118072022 -132615832 - MIR SINE MIR -40 222 2 22 56 0 0 chr2 118072211 118072247 -132615607 + AT_rich Low_complexity Low_complexity 1 36 0 266 312 126 30 chr2 118072545 118072744 -132615110 - MIR SINE MIR -44 218 1 1880 177 11 20 chr2 118073912 118074268 -132613586 + MER47B DNA MER2_type 7 359 -59 837 204 0 12 chr2 118075194 118075366 -132612488 - Tigger1 DNA MER2_type 0 2418 2249 1519 162 0 0 chr2 118075400 118075653 -132612201 - Tigger1 DNA MER2_type -2165 253 1 204 111 0 0 chr2 118076318 118076354 -132611500 + (CA)n Simple_repeat Simple_repeat 1 36 0 194 125 0 25 chr2 118077526 118077566 -132610288 + (TC)n Simple_repeat Simple_repeat 2 40 0 571 273 102 0 chr2 118078287 118078474 -132609380 + MIR SINE MIR 54 259 -3 234 435 32 0 chr2 118078975 118079099 -132608755 - L2 LINE L2 -11 3261 3134 1152 151 0 0 chr2 118079102 118079281 -132608573 + AluSq SINE Alu 129 307 -6 994 238 98 48 chr2 118079398 118079777 -132608077 + MLT1C LTR MaLR 69 466 -1 2292 95 3 0 chr2 118080315 118080611 -132607243 + AluSx SINE Alu 1 297 -15 1499 218 38 9 chr2 118081906 118082245 -132605609 - LTR48B LTR ERV1 0 644 296 229 237 26 13 chr2 118082272 118082348 -132605506 - LTR48B LTR ERV1 -417 227 151 290 235 41 61 chr2 118082353 118082402 -132605452 - MER34 LTR ERV1 -446 96 48 2013 140 0 3 chr2 118082402 118082702 -132605152 + AluSx SINE Alu 3 301 -11 290 235 41 61 chr2 118082702 118082750 -132605104 - MER34 LTR ERV1 -494 48 1 358 190 128 30 chr2 118083971 118084174 -132603680 - LTR48 LTR ERV1 0 732 397 992 190 113 36 chr2 118084183 118084239 -132603615 - MER34C LTR ERV1 -264 321 271 2024 181 36 29 chr2 118084239 118084660 -132603194 - MSTB LTR MaLR 0 426 3 992 190 113 36 chr2 118084660 118084940 -132602914 - MER34C LTR ERV1 -314 271 4 6073 50 0 1 chr2 118085676 118086424 -132601430 - L1PA5 LINE L1 0 6154 5408 234 257 76 19 chr2 118088228 118088333 -132599521 - MIR SINE MIR -81 181 71 21 0 0 0 chr2 118088885 118088906 -132598948 + AT_rich Low_complexity Low_complexity 1 21 0 3812 162 41 83 chr2 118089046 118089726 -132598128 + L1PB4 LINE L1 5154 5779 -377 282 116 0 0 chr2 118089726 118089769 -132598085 + (CA)n Simple_repeat Simple_repeat 2 44 0 3812 162 41 83 chr2 118089769 118090131 -132597723 + L1PB4 LINE L1 5779 6155 -1 24 32 0 0 chr2 118090131 118090162 -132597692 + AT_rich Low_complexity Low_complexity 1 31 0 3804 87 5 89 chr2 118091287 118091953 -132595901 + LTR66 LTR ERVL 1 610 0 12937 91 19 6 chr2 118091953 118093715 -132594139 + HERVL66 LTR ERVL 1 1786 -2543 4847 133 4 1 chr2 118093705 118094402 -132593452 + HERVL66 LTR ERVL 2654 3352 -977 * 3859 103 4 7 chr2 118094391 118095073 -132592781 + HERVL66 LTR ERVL 3565 4328 -1 * 3598 92 6 118 chr2 118095074 118095760 -132592094 + LTR66 LTR ERVL 1 609 -1 440 95 0 0 chr2 118095788 118095851 -132592003 + L1MA9 LINE L1 6192 6254 -58 643 205 0 0 chr2 118095954 118096066 -132591788 + AluJ SINE Alu 1 112 -200 1557 177 171 8 chr2 118096066 118096434 -132591420 - MSTA LTR MaLR 0 428 1 7911 148 15 30 chr2 118096434 118098032 -132589822 - MSTA-int LTR MaLR 0 1580 3 1512 145 160 74 chr2 118098034 118098428 -132589426 - MSTA LTR MaLR 0 428 1 1016 173 0 38 chr2 118098429 118098614 -132589240 + AluJ SINE Alu 109 286 -26 21 0 0 0 chr2 118099219 118099240 -132588614 + AT_rich Low_complexity Low_complexity 1 21 0 333 350 99 11 chr2 118099502 118099765 -132588089 - MLT1J2 LTR MaLR -162 288 3 27 29 0 0 chr2 118099808 118099842 -132588012 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 118100000 118100021 -132587833 + AT_rich Low_complexity Low_complexity 1 21 0 29 28 0 0 chr2 118100171 118100207 -132587647 + AT_rich Low_complexity Low_complexity 1 36 0 425 292 67 38 chr2 118100222 118100489 -132587365 + L1ME3A LINE L1 5847 6121 -49 23 33 0 0 chr2 118100507 118100537 -132587317 + AT_rich Low_complexity Low_complexity 1 30 0 321 270 31 31 chr2 118101168 118101327 -132586527 + GA-rich Low_complexity Low_complexity 4 162 0 2140 98 3 76 chr2 118101678 118102006 -132585848 - AluSq SINE Alu -7 306 3 4047 168 17 6 chr2 118102113 118102816 -132585038 + MER50 LTR ERV1 1 711 -23 2598 201 38 6 chr2 118103034 118103567 -132584287 - MER44D DNA MER2_type 0 605 1 220 343 114 19 chr2 118104114 118104219 -132583635 - L3 LINE CR1 -89 1488 1374 334 293 61 25 chr2 118105035 118105233 -132582621 + MER102b DNA MER1_type 135 339 -2 246 324 0 0 chr2 118105319 118105393 -132582461 + MIR3 SINE MIR 114 187 -21 455 327 41 38 chr2 118105574 118105913 -132581941 - MER102b DNA MER1_type 0 341 2 765 239 12 0 chr2 118106031 118106194 -132581660 + MER5A DNA MER1_type 20 184 -5 345 224 167 39 chr2 118106222 118106378 -132581476 - MER5B DNA MER1_type -2 176 1 259 321 139 24 chr2 118107113 118107278 -132580576 - MIR SINE MIR 0 262 79 290 182 15 0 chr2 118107334 118107400 -132580454 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 35 0 0 0 chr2 118107541 118107576 -132580278 + AT_rich Low_complexity Low_complexity 1 35 0 24 77 0 0 chr2 118107669 118107721 -132580133 + AT_rich Low_complexity Low_complexity 1 52 0 306 0 0 0 chr2 118108352 118108386 -132579468 + (GA)n Simple_repeat Simple_repeat 1 34 0 234 206 16 63 chr2 118108530 118108656 -132579198 + A-rich Low_complexity Low_complexity 2 121 0 10949 207 22 15 chr2 118108792 118111434 -132576420 + L1 LINE L1 2584 5242 -904 1291 231 36 13 chr2 118111452 118111838 -132576016 - L1M4 LINE L1 -1348 4798 4404 27 29 0 0 chr2 118113330 118113364 -132574490 + AT_rich Low_complexity Low_complexity 1 34 0 230 320 78 66 chr2 118114302 118114546 -132573308 + HAL1 LINE L1 222 468 -2039 269 248 120 64 chr2 118114616 118114741 -132573113 + HAL1 LINE L1 480 611 -1896 719 303 125 35 chr2 118114980 118115722 -132572132 + HAL1 LINE L1 1699 2507 0 2201 121 0 0 chr2 118115867 118116180 -132571674 - AluSq SINE Alu 0 313 1 335 287 98 8 chr2 118116181 118116303 -132571551 + MIR SINE MIR 94 226 -36 264 30 0 0 chr2 118116425 118116458 -132571396 + (TC)n Simple_repeat Simple_repeat 2 34 0 * 381 43 0 0 chr2 118116457 118116504 -132571350 + (TA)n Simple_repeat Simple_repeat 1 47 0 794 233 9 45 chr2 118116511 118116734 -132571120 - MER20 DNA MER1_type -4 215 1 22 0 0 0 chr2 118117958 118117980 -132569874 + AT_rich Low_complexity Low_complexity 1 22 0 382 305 62 42 chr2 118118531 118119035 -132568819 - L1MC4 LINE L1 -555 7487 6981 333 155 0 0 chr2 118119054 118119112 -132568742 + CT-rich Low_complexity Low_complexity 3 60 0 2104 227 30 33 chr2 118119232 118119893 -132567961 + L1M4 LINE L1 4404 5062 -1084 23 0 0 0 chr2 118121195 118121218 -132566636 + AT_rich Low_complexity Low_complexity 1 23 0 360 230 65 91 chr2 118121888 118122118 -132565736 - L1ME LINE L1 -335 5786 5563 2145 30 52 0 chr2 118122690 118122959 -132564895 - L1PA4 LINE L1 -2 6153 5871 1362 19 0 0 chr2 118122959 118123117 -132564737 + L1PA4 LINE L1 5720 5877 -277 292 238 85 30 chr2 118123131 118123295 -132564559 - L1ME LINE L1 -2381 5427 5255 1503 152 108 19 chr2 118128189 118128504 -132559350 + MER61A LTR ERV1 1 343 0 2118 207 43 19 chr2 118128504 118129040 -132558814 + MER61A-int LTR ERV1 1 549 -4668 22340 108 24 9 chr2 118129125 118132868 -132554986 + MER61A-int LTR ERV1 1320 5217 0 1531 156 112 19 chr2 118132868 118133182 -132554672 + MER61A LTR ERV1 1 343 0 185 392 0 0 chr2 118133843 118133917 -132553937 - MIR SINE MIR -115 147 74 * 222 283 0 17 chr2 118133912 118133972 -132553882 - MIR SINE MIR 0 262 204 396 0 0 0 chr2 118133991 118134035 -132553819 + (TG)n Simple_repeat Simple_repeat 2 45 0 404 315 52 56 chr2 118135224 118135437 -132552417 + MIR SINE MIR 1 212 -50 495 333 15 10 chr2 118136379 118136577 -132551277 + MIR SINE MIR 7 205 -57 1123 52 0 0 chr2 118136865 118136999 -132550855 + AluY SINE Alu 160 293 -18 333 271 93 0 chr2 118137014 118137132 -132550722 - MIR SINE MIR -100 162 34 1416 215 22 41 chr2 118137524 118137960 -132549894 + MLT2B2 LTR ERVL 8 481 -34 224 328 60 17 chr2 118137989 118138105 -132549749 - MIR SINE MIR -77 185 65 27 0 0 0 chr2 118138105 118138132 -132549722 + AT_rich Low_complexity Low_complexity 1 27 0 2118 221 47 21 chr2 118138191 118138706 -132549148 - MER50 LTR ERV1 0 734 207 831 218 38 35 chr2 118138723 118138984 -132548870 - AluSq SINE Alu -25 288 27 285 75 25 0 chr2 118139205 118139245 -132548609 - AluSq SINE Alu -261 41 1 * 1170 158 51 5 chr2 118139245 118139458 -132548396 - MER50 LTR ERV1 -511 223 1 216 361 49 49 chr2 118139494 118139638 -132548216 + MIR3 SINE MIR 4 147 -61 246 206 48 32 chr2 118139983 118140046 -132547808 - MIR SINE MIR -98 110 47 362 21 21 0 chr2 118140926 118140973 -132546881 + (CA)n Simple_repeat Simple_repeat 1 48 0 518 229 172 59 chr2 118141489 118141981 -132545873 + LTR48 LTR ERV1 7 642 -2 21 0 0 0 chr2 118142152 118142173 -132545681 + AT_rich Low_complexity Low_complexity 1 21 0 2012 275 88 7 chr2 118145015 118145687 -132542167 + L1ME3 LINE L1 5400 6125 -37 2030 179 18 48 chr2 118145993 118146433 -132541421 - MSTC LTR MaLR 0 428 2 22 0 0 0 chr2 118146626 118146648 -132541206 + AT_rich Low_complexity Low_complexity 1 22 0 385 265 65 35 chr2 118147506 118147706 -132540148 + L2 LINE L2 3028 3233 -80 1081 189 20 10 chr2 118147811 118148012 -132539842 - MER20 DNA MER1_type 0 219 17 1076 103 0 0 chr2 118148537 118148683 -132539171 + AluY SINE Alu 154 299 -12 776 327 72 9 chr2 118148691 118149037 -132538817 + LTR33 LTR ERVL 100 467 -54 391 236 96 82 chr2 118149229 118149449 -132538405 - L1MC4 LINE L1 -191 7851 7629 253 307 22 44 chr2 118149882 118150019 -132537835 - MER117 DNA MER1_type -28 169 36 2140 119 0 7 chr2 118150524 118150817 -132537037 + AluSx SINE Alu 1 291 -21 225 0 0 0 chr2 118151034 118151059 -132536795 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 238 117 39 26 chr2 118151400 118151477 -132536377 + (TA)n Simple_repeat Simple_repeat 1 78 0 186 43 0 0 chr2 118151797 118151820 -132536034 + (TA)n Simple_repeat Simple_repeat 1 23 0 219 289 0 0 chr2 118152132 118152184 -132535670 + CT-rich Low_complexity Low_complexity 3 54 0 737 224 53 137 chr2 118152287 118152644 -132535210 - MER58B DNA MER1_type -14 327 1 411 266 47 116 chr2 118152649 118152812 -132535042 + MIR SINE MIR 46 190 -72 2236 86 0 0 chr2 118152812 118153091 -132534763 + AluSc SINE Alu 9 287 -22 411 266 47 116 chr2 118153091 118153160 -132534694 + MIR SINE MIR 190 262 0 2229 101 0 3 chr2 118153296 118153592 -132534262 + AluY SINE Alu 1 295 -16 2453 167 15 30 chr2 118153863 118154279 -132533575 + MER65C LTR ERV1 1 411 -50 539 237 23 15 chr2 118154279 118154410 -132533444 - FLAM_A SINE Alu -1 132 1 2453 167 15 30 chr2 118154410 118154461 -132533393 + MER65C LTR ERV1 411 461 0 283 154 0 58 chr2 118154911 118154963 -132532891 + LTR33-int LTR ERVL 303 351 -4992 730 253 53 17 chr2 118155251 118155562 -132532292 + MER34 LTR ERV1 34 380 -162 2576 229 81 13 chr2 118155562 118156427 -132531427 + MER65C-int LTR ERV1 1570 2493 -2378 25 31 0 0 chr2 118156513 118156545 -132531309 + AT_rich Low_complexity Low_complexity 1 32 0 473 305 30 15 chr2 118156596 118156799 -132531055 + MER65C-int LTR ERV1 2364 2569 -2554 1591 209 109 80 chr2 118157015 118158552 -132529302 + MER65C-int LTR ERV1 3499 5103 -1228 267 200 0 94 chr2 118158552 118158637 -132529217 + MER65C-int LTR ERV1 5459 5535 -728 1063 248 34 85 chr2 118158723 118159238 -132528616 + MER65C-int LTR ERV1 3608 4173 -698 804 288 76 34 chr2 118159303 118159803 -132528051 + MER65C-int LTR ERV1 4351 4871 0 2139 193 31 20 chr2 118159803 118160259 -132527595 + MER65C LTR ERV1 1 461 0 26 50 0 0 chr2 118160533 118160573 -132527281 + AT_rich Low_complexity Low_complexity 1 40 0 349 320 0 0 chr2 118161088 118161185 -132526669 - MER5A DNA MER1_type -91 98 2 23 33 0 0 chr2 118161965 118161995 -132525859 + AT_rich Low_complexity Low_complexity 1 30 0 800 211 80 50 chr2 118163577 118163623 -132524231 + MER63A DNA MER1_type 1 44 -1644 2228 115 3 0 chr2 118163623 118163927 -132523927 + AluSg1 SINE Alu 1 305 -4 800 211 80 50 chr2 118163927 118164079 -132523775 + MER63A DNA MER1_type 44 205 -5 198 291 18 0 chr2 118165238 118165293 -132522561 - MIR SINE MIR -80 128 73 811 258 186 41 chr2 118165328 118165786 -132522068 + MLT1H1 LTR MaLR 19 539 -16 1516 246 62 14 chr2 118166016 118166439 -132521415 + LTR40b LTR ERVL 20 462 0 21 0 0 0 chr2 118166611 118166632 -132521222 + AT_rich Low_complexity Low_complexity 1 21 0 447 298 37 37 chr2 118168468 118168629 -132519225 - MIR3 SINE MIR -18 190 30 651 297 58 66 chr2 118170277 118170353 -132517501 + MLT1I LTR MaLR 2 77 -332 2548 68 0 0 chr2 118170353 118170662 -132517192 + AluY SINE Alu 1 309 -2 651 297 58 66 chr2 118170662 118170932 -132516922 + MLT1I LTR MaLR 77 345 -64 449 307 209 0 chr2 118171289 118171504 -132516350 - MIR SINE MIR -2 260 1 180 0 0 0 chr2 118171839 118171859 -132515995 + (CA)n Simple_repeat Simple_repeat 1 20 0 903 282 43 23 chr2 118172083 118172431 -132515423 + L1ME LINE L1 273 627 -5443 1365 287 18 97 chr2 118172432 118173469 -132514385 + L1ME LINE L1 2292 3246 -2834 2691 141 10 50 chr2 118173469 118173950 -132513904 + MER4C LTR ERV1 1 462 -3 1829 165 26 0 chr2 118173961 118174264 -132513590 - AluSx SINE Alu -1 311 1 406 325 48 0 chr2 118174285 118174494 -132513360 + L1ME LINE L1 3243 3461 -2619 578 216 0 0 chr2 118174665 118174767 -132513087 + AluJ/FLAM SINE Alu 1 102 -210 432 0 0 0 chr2 118174778 118174826 -132513028 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr2 118175425 118175446 -132512408 + AT_rich Low_complexity Low_complexity 1 21 0 1254 227 20 35 chr2 118175815 118176158 -132511696 + L1ME LINE L1 5485 5822 -344 1747 157 83 21 chr2 118176158 118176496 -132511358 - THE1B LTR MaLR -3 361 3 8710 116 9 2 chr2 118176498 118177717 -132510137 - THE1B-int LTR MaLR 0 1580 354 1567 112 80 4 chr2 118177725 118177976 -132509878 - L1P5 LINE L1 -363 5788 5519 956 78 0 0 chr2 118177979 118178095 -132509759 - AluSq/x SINE Alu -163 149 34 260 62 0 0 chr2 118178146 118178178 -132509676 + THE1A LTR MaLR 1 32 -323 3214 109 13 71 chr2 118178524 118179130 -132508724 - L1PB1 LINE L1 -323 5828 5258 259 49 98 0 chr2 118179113 118179154 -132508700 - L1PA8A LINE L1 -411 5720 5676 * 1170 165 25 12 chr2 118179156 118179399 -132508455 - L1PBa LINE L1 -4970 1893 1648 631 285 24 0 chr2 118179379 118179586 -132508268 - L1PBa LINE L1 -6646 217 6 * 2411 145 76 15 chr2 118179604 118180147 -132507707 + MER4E LTR ERV1 27 766 0 398 328 66 8 chr2 118180715 118180837 -132507017 + MIR3 SINE MIR 5 133 -75 191 286 118 42 chr2 118180833 118180952 -132506902 - L2 LINE L2 -2 3270 3143 * 4433 27 0 0 chr2 118181282 118181818 -132506036 + L1PA3 LINE L1 5624 6159 0 199 0 0 0 chr2 118181796 118181874 -132505980 + (TAA)n Simple_repeat Simple_repeat 3 80 0 1069 158 98 0 chr2 118181990 118182174 -132505680 - LTR28 LTR ERV1 -509 511 310 344 395 43 0 chr2 118184848 118185010 -132502844 - L2 LINE L2 0 3272 3104 279 0 0 0 chr2 118185116 118185147 -132502707 + (TG)n Simple_repeat Simple_repeat 2 32 0 742 302 24 31 chr2 118187004 118187259 -132500595 - MIR SINE MIR 0 262 10 2161 124 3 3 chr2 118187671 118187977 -132499877 + AluSg SINE Alu 1 306 -4 186 118 0 0 chr2 118188533 118188567 -132499287 + (T)n Simple_repeat Simple_repeat 1 34 0 196 361 42 0 chr2 118189977 118190049 -132497805 + MIR SINE MIR 109 183 -79 254 210 32 0 chr2 118190050 118190112 -132497742 + (TATATG)n Simple_repeat Simple_repeat 4 67 0 368 211 0 35 chr2 118191022 118191164 -132496690 + GA-rich Low_complexity Low_complexity 4 140 0 862 217 6 29 chr2 118195047 118195222 -132492632 - AluJo SINE Alu -55 257 87 1190 186 32 0 chr2 118195286 118195566 -132492288 - L1MA4 LINE L1 -11 6289 6001 324 176 0 0 chr2 118195656 118195707 -132492147 - MLT2C2 LTR ERVL 0 464 414 267 264 0 0 chr2 118195717 118195808 -132492046 + (TA)n Simple_repeat Simple_repeat 1 91 0 1719 214 55 100 chr2 118195818 118196368 -132491486 - MLT2B3 LTR ERVL -40 504 1 2144 169 37 39 chr2 118196505 118196938 -132490916 - MSTB1 LTR MaLR 0 432 1 420 269 9 9 chr2 118197117 118197225 -132490629 + LTR40b LTR ERVL 354 461 -1 1117 230 8 103 chr2 118197847 118198226 -132489628 - L1M4 LINE L1 -6192 350 8 228 396 78 7 chr2 118198322 118198476 -132489378 - L2 LINE L2 -1 3271 3107 342 0 0 0 chr2 118198559 118198597 -132489257 + (TG)n Simple_repeat Simple_repeat 2 39 0 664 289 78 9 chr2 118198676 118198894 -132488960 + MIR SINE MIR 2 234 -28 7467 26 4 2 chr2 118199262 118200175 -132487679 + L1PA4 LINE L1 5233 6155 0 1721 166 28 11 chr2 118202038 118202472 -132485382 - L1MA9 LINE L1 0 6312 5786 242 260 21 10 chr2 118202474 118202570 -132485284 + (TAAA)n Simple_repeat Simple_repeat 3 99 0 3590 201 47 18 chr2 118202670 118203808 -132484046 - L1MA9 LINE L1 -523 5789 4603 2107 95 42 0 chr2 118203808 118204091 -132483763 - AluY SINE Alu -16 295 1 3590 201 47 18 chr2 118204091 118204274 -132483580 - L1MA9 LINE L1 -1709 4603 4427 1339 209 50 3 chr2 118204271 118204611 -132483243 - L1MA9 LINE L1 -1924 4222 3867 * 246 109 22 0 chr2 118204613 118204659 -132483195 + LTR66 LTR ERVL 394 440 -170 330 159 0 0 chr2 118204662 118204731 -132483123 + (TA)n Simple_repeat Simple_repeat 2 70 0 368 188 12 12 chr2 118204839 118204999 -132482855 + (TA)n Simple_repeat Simple_repeat 1 160 0 196 313 111 10 chr2 118205002 118205101 -132482753 + L2 LINE L2 3200 3308 -5 2803 70 3 0 chr2 118205645 118206019 -132481835 + L1PA4 LINE L1 5781 6155 0 2942 222 70 56 chr2 118206200 118207150 -132480704 - L1MB7 LINE L1 0 6184 5212 827 351 32 11 chr2 118207236 118207515 -132480339 - L1M4b LINE L1 -6286 573 289 304 229 0 0 chr2 118207516 118207586 -132480268 - MLT1B LTR MaLR -127 263 194 513 273 61 30 chr2 118207645 118207810 -132480044 - L1M4b LINE L1 -6688 171 2 332 183 56 14 chr2 118208142 118208213 -132479641 - Tigger2a DNA MER2_type -346 88 15 486 0 0 0 chr2 118208217 118208271 -132479583 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 260 354 0 0 chr2 118208694 118208773 -132479081 + L2 LINE L2 3186 3264 -8 362 220 53 0 chr2 118208808 118208940 -132478914 + (TA)n Simple_repeat Simple_repeat 1 139 0 32 0 0 0 chr2 118209111 118209143 -132478711 + AT_rich Low_complexity Low_complexity 1 32 0 1274 204 14 0 chr2 118209150 118209371 -132478483 + MER8 DNA MER2_type 2 225 -14 444 37 0 0 chr2 118209375 118209429 -132478425 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 549 279 35 0 chr2 118210617 118210789 -132477065 - L1ME1 LINE L1 -6 6160 5983 464 184 3 73 chr2 118211393 118211848 -132476006 + (CATA)n Simple_repeat Simple_repeat 1 423 0 338 104 39 66 chr2 118211851 118212033 -132475821 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 539 73 87 0 chr2 118212106 118212256 -132475598 + (TA)n Simple_repeat Simple_repeat 1 163 0 2077 133 0 0 chr2 118212305 118212599 -132475255 - AluSx SINE Alu -16 296 3 524 318 113 38 chr2 118212912 118213311 -132474543 - L2 LINE L2 -4 3309 2881 315 278 91 11 chr2 118213503 118213679 -132474175 - L1ME1 LINE L1 -281 5840 5651 527 182 21 25 chr2 118214123 118214384 -132473470 + GA-rich Low_complexity Low_complexity 1 260 0 4746 163 130 18 chr2 118215817 118216733 -132471121 + LTR28 LTR ERV1 2 1020 0 223 321 35 11 chr2 118216741 118216836 -132471018 - MER5A DNA MER1_type -62 116 25 2026 137 50 36 chr2 118217169 118217245 -132470609 - THE1B LTR MaLR 0 364 291 2227 74 23 23 chr2 118217245 118217544 -132470310 + AluY SINE Alu 1 299 -12 2026 137 50 36 chr2 118217544 118217826 -132470028 - THE1B LTR MaLR -73 291 1 338 288 9 27 chr2 118218427 118218538 -132469316 + CT-rich Low_complexity Low_complexity 4 112 0 1694 131 69 48 chr2 118218621 118218911 -132468943 - AluSx SINE Alu -16 296 1 21 82 0 0 chr2 118219267 118219316 -132468538 + AT_rich Low_complexity Low_complexity 1 49 0 1004 302 57 11 chr2 118219996 118220456 -132467398 + L1ME3 LINE L1 3217 3697 -2449 1303 174 11 41 chr2 118220472 118220742 -132467112 + AluJo SINE Alu 35 296 -16 458 33 17 0 chr2 118220747 118220807 -132467047 + (GA)n Simple_repeat Simple_repeat 1 61 0 1660 306 109 23 chr2 118220807 118222504 -132465350 + L1ME3 LINE L1 3685 5525 -637 1061 280 34 25 chr2 118222558 118223029 -132464825 + L1ME3 LINE L1 5657 6131 -31 877 315 93 17 chr2 118224022 118225162 -132462692 + L1ME3 LINE L1 4302 5525 -639 877 287 40 30 chr2 118225219 118225647 -132462207 + L1ME3 LINE L1 5660 6091 -71 367 327 10 10 chr2 118227018 118227119 -132460735 + MER5B DNA MER1_type 57 157 -21 537 240 16 0 chr2 118227123 118227244 -132460610 - MER5B DNA MER1_type -53 125 3 1559 188 55 36 chr2 118227435 118227631 -132460223 + MLT1A2 LTR MaLR 7 215 -159 198 0 0 0 chr2 118227631 118227653 -132460201 + (CAA)n Simple_repeat Simple_repeat 3 24 0 1559 188 55 36 chr2 118227653 118227817 -132460037 + MLT1A2 LTR MaLR 215 374 0 991 285 174 38 chr2 118228530 118229315 -132458539 - HAL1 LINE L1 -2 2505 1614 471 311 31 33 chr2 118229299 118229554 -132458300 + L1PA13 LINE L1 1081 1467 -5320 * 350 243 83 42 chr2 118229570 118229714 -132458140 - HAL1 LINE L1 -898 1609 1460 1758 188 3 0 chr2 118229744 118230052 -132457802 - AluJb SINE Alu -3 309 1 294 208 0 0 chr2 118230238 118230286 -132457568 - AluJ/monomer SINE Alu -252 48 1 475 204 121 24 chr2 118230302 118230508 -132457346 + L1ME2 LINE L1 4482 4707 -1439 1697 211 36 12 chr2 118230513 118230849 -132457005 + L1PA13 LINE L1 2 345 -6442 1532 316 144 7 chr2 118230858 118231450 -132456404 + L1PA13 LINE L1 586 1258 -5529 2446 188 0 0 chr2 118231453 118231889 -132455965 + L1PA13 LINE L1 1396 1831 -4956 13559 186 28 12 chr2 118231897 118232551 -132455303 + L1PA13 LINE L1 3151 3793 -3021 216 0 0 0 chr2 118232551 118232575 -132455279 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 13559 186 28 12 chr2 118232575 118234863 -132452991 + L1PA13 LINE L1 3793 6160 -654 1772 156 14 7 chr2 118234863 118235152 -132452702 + AluSc SINE Alu 1 291 -18 13559 186 28 12 chr2 118235152 118235818 -132452036 + L1PA13 LINE L1 6160 6814 0 2435 242 72 12 chr2 118235820 118237097 -132450757 + L1ME2 LINE L1 4694 6048 -116 274 149 122 27 chr2 118237094 118237168 -132450686 - L1MC4 LINE L1 -1317 6725 6645 * 333 221 93 0 chr2 118237868 118237954 -132449900 - L1MC4 LINE L1 -1338 6704 6611 21 36 0 0 chr2 118239962 118239990 -132447864 + AT_rich Low_complexity Low_complexity 1 28 0 3303 46 0 2 chr2 118240921 118241332 -132446522 - L1PA3 LINE L1 -3 6152 5743 23 108 0 0 chr2 118241763 118241856 -132445998 + AT_rich Low_complexity Low_complexity 1 93 0 572 229 71 75 chr2 118241911 118242178 -132445676 + HsTC2 DNA Tc2 1248 1689 -209 209 246 0 58 chr2 118242254 118242323 -132445531 - MIR SINE MIR -3 259 195 2398 322 80 26 chr2 118242619 118244130 -132443724 - L2 LINE L2 -10 3303 1713 20987 135 16 6 chr2 118244214 118248461 -132439393 - L1PA8A LINE L1 -5 6441 2158 7437 25 9 0 chr2 118248479 118249362 -132438492 - L1PA3 LINE L1 -3 6152 5262 7460 167 4 9 chr2 118249363 118250262 -132437592 - L1PA8A LINE L1 -4296 2165 1263 183 100 0 0 chr2 118250262 118250292 -132437562 + (TTG)n Simple_repeat Simple_repeat 1 30 0 7460 167 4 9 chr2 118250292 118251456 -132436398 - L1PA8A LINE L1 -5198 1263 66 448 157 0 36 chr2 118251478 118251561 -132436293 - L1PA8A LINE L1 -5793 82 3 25 0 0 0 chr2 118251638 118251663 -132436191 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 118253032 118253055 -132434799 + AT_rich Low_complexity Low_complexity 1 23 0 261 42 42 21 chr2 118254176 118254224 -132433630 + (GAAA)n Simple_repeat Simple_repeat 4 52 0 1422 263 117 14 chr2 118254290 118254776 -132433078 - REP3 LTR ERV -18 544 9 223 298 0 85 chr2 118254878 118254972 -132432882 - L2 LINE L2 -1 3271 3186 25 0 0 0 chr2 118257897 118257922 -132429932 + AT_rich Low_complexity Low_complexity 1 25 0 2617 154 58 19 chr2 118258229 118258708 -132429146 - MLT2B2 LTR ERVL 0 515 18 187 130 22 43 chr2 118258749 118258795 -132429059 + L2 LINE L2 2224 2268 -1046 388 334 14 13 chr2 118259533 118259699 -132428155 - HAL1b LINE L1 -7 1341 1196 186 103 0 0 chr2 118259712 118259741 -132428113 + (CA)n Simple_repeat Simple_repeat 2 30 0 397 175 0 12 chr2 118259782 118259862 -132427992 - LTR40a LTR ERVL -12 507 429 1456 276 41 31 chr2 118260318 118260829 -132427025 - LTR40a LTR ERVL -3 516 1 892 173 0 0 chr2 118261374 118261507 -132426347 + FLAM_A SINE Alu 1 133 0 2256 103 3 3 chr2 118261522 118261833 -132426021 + AluSp SINE Alu 1 311 -2 1991 145 94 12 chr2 118261840 118262267 -132425587 + L1MB4 LINE L1 5679 6140 -40 333 283 0 9 chr2 118262374 118262487 -132425367 + L1M4 LINE L1 2653 2764 -3382 1676 174 18 0 chr2 118262993 118263269 -132424585 + AluJo SINE Alu 1 281 -31 1809 84 8 12 chr2 118263308 118263558 -132424296 + AluSc SINE Alu 30 278 -31 405 0 0 0 chr2 118263562 118263607 -132424247 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 1937 93 10 21 chr2 118264531 118264821 -132423033 - AluY SINE Alu -24 287 1 402 147 0 39 chr2 118264826 118264928 -132422926 + Tigger1 DNA MER2_type 2210 2307 -111 578 206 12 91 chr2 118264931 118265096 -132422758 - FRAM SINE Alu -13 163 12 1763 100 25 0 chr2 118266616 118266856 -132420998 + AluSq SINE Alu 1 246 -67 239 246 53 0 chr2 118268278 118268335 -132419519 + MER110 LTR ERV1 425 484 -7 447 289 175 6 chr2 118268457 118268623 -132419231 - MIR SINE MIR -63 199 6 1239 261 114 14 chr2 118268688 118269178 -132418676 - LTR26 LTR ERV1 0 603 65 361 354 19 13 chr2 118269541 118269699 -132418155 + L1ME2 LINE L1 5413 5571 -595 1797 131 40 0 chr2 118269706 118270004 -132417850 - L1P3 LINE L1 -1513 4633 4324 * 4050 97 26 37 chr2 118270001 118270130 -132417724 + L1P3 LINE L1 4653 4782 -1390 276 100 0 0 chr2 118270130 118270170 -132417684 + (TA)n Simple_repeat Simple_repeat 2 41 0 4050 97 26 37 chr2 118270170 118271128 -132416726 + L1P3 LINE L1 4782 5731 -441 4152 95 0 0 chr2 118271173 118271740 -132416114 + L1PA8 LINE L1 5589 6155 -17 1296 231 22 63 chr2 118271762 118272256 -132415598 + L1ME2 LINE L1 5583 6056 -110 329 248 77 26 chr2 118272257 118272374 -132415480 - L1MC4 LINE L1 -1305 6737 6615 489 162 0 0 chr2 118272522 118272633 -132415221 + (TA)n Simple_repeat Simple_repeat 2 112 0 414 0 0 0 chr2 118272647 118272693 -132415161 + (TG)n Simple_repeat Simple_repeat 2 47 0 4671 168 48 14 chr2 118273446 118274485 -132413369 - L1MA7 LINE L1 0 6291 5219 9202 194 33 13 chr2 118274667 118278003 -132409851 - L1PA15 LINE L1 -6 6810 3280 362 247 0 0 chr2 118278019 118278100 -132409754 - L1PA15 LINE L1 -6666 121 41 240 378 47 25 chr2 118278813 118279091 -132408763 + L2 LINE L2 2504 2787 -527 257 366 130 14 chr2 118279156 118279372 -132408482 + L2 LINE L2 3032 3272 0 50 51 0 0 chr2 118279445 118279523 -132408331 + AT_rich Low_complexity Low_complexity 1 78 0 327 224 59 12 chr2 118279753 118279838 -132408016 + L1MC4 LINE L1 6622 6710 -1332 199 0 65 0 chr2 118279840 118279871 -132407983 + (TA)n Simple_repeat Simple_repeat 2 34 0 304 325 77 8 chr2 118280148 118280382 -132407472 - L1ME LINE L1 -382 5739 5490 202 222 74 37 chr2 118281787 118281841 -132406013 - L2 LINE L2 -8 3305 3250 14648 138 35 21 chr2 118282065 118284744 -132403110 + L1PBa LINE L1 1 2718 -4145 10711 119 1 20 chr2 118284740 118286475 -132401379 + L1PB1 LINE L1 450 2151 -3995 * 7684 62 6 16 chr2 118286475 118288283 -132399571 + L1PA6 LINE L1 4327 6144 -10 2858 154 38 37 chr2 118288302 118289265 -132398589 + L1PB1 LINE L1 4838 5791 -360 208 154 39 0 chr2 118289267 118289319 -132398535 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 2614 97 3 0 chr2 118289319 118289681 -132398173 + L1PB1 LINE L1 5784 6146 -5 2179 195 224 91 chr2 118289799 118290697 -132397157 + LTR28 LTR ERV1 4 1020 0 4563 17 0 0 chr2 118292058 118292608 -132395246 + L1PA3 LINE L1 5623 6172 0 21 0 0 0 chr2 118293883 118293904 -132393950 + AT_rich Low_complexity Low_complexity 1 21 0 617 211 23 0 chr2 118293904 118294032 -132393822 - FLAM_C SINE Alu -2 131 1 194 320 67 0 chr2 118294048 118294123 -132393731 - MER5A DNA MER1_type -63 126 47 256 286 79 40 chr2 118294682 118294808 -132393046 + MIR SINE MIR 22 152 -110 2429 191 56 26 chr2 118296263 118296760 -132391094 + MLT2B2 LTR ERVL 2 513 -2 2703 216 109 34 chr2 118296961 118297737 -132390117 - MER21B LTR ERV1 -23 840 6 414 268 167 36 chr2 118298405 118298573 -132389281 + L2 LINE L2 3108 3297 -16 370 297 10 56 chr2 118298673 118298868 -132388986 + L2 LINE L2 3096 3281 -32 3617 214 41 24 chr2 118299060 118300214 -132387640 + L1MD1 LINE L1 5069 6236 -6 1708 126 24 0 chr2 118300724 118300970 -132386884 + AluSq SINE Alu 61 312 -1 1858 134 12 25 chr2 118300971 118301221 -132386633 + L1PA12 LINE L1 5432 5679 -495 1940 169 0 0 chr2 118301221 118301516 -132386338 + AluSx SINE Alu 1 295 -17 1858 134 12 25 chr2 118301516 118301586 -132386268 + L1PA12 LINE L1 5679 5748 -426 1064 164 43 26 chr2 118301577 118301809 -132386045 - L1P LINE L1 -1257 4889 4654 * 2468 144 17 0 chr2 118301819 118302228 -132385626 + L1PA12 LINE L1 5753 6168 0 1245 258 125 18 chr2 118302238 118302902 -132384952 + L1M4 LINE L1 4247 4981 -1165 10712 167 34 5 chr2 118303006 118305107 -132382747 - L1P LINE L1 -734 5429 3282 338 354 46 6 chr2 118305519 118305694 -132382160 - MIR SINE MIR -26 236 55 30 27 0 0 chr2 118307557 118307594 -132380260 + AT_rich Low_complexity Low_complexity 1 37 0 364 256 40 34 chr2 118308694 118308870 -132378984 - MER104 DNA Tc2 -3 177 1 1320 198 13 113 chr2 118309305 118309775 -132378079 + L1ME LINE L1 4902 5324 -822 2274 150 49 5 chr2 118309775 118310179 -132377675 + L1PB4 LINE L1 5730 6154 -2 38253 79 12 9 chr2 118310200 118316366 -132371488 + L1PA6 LINE L1 11 6194 0 342 108 11 86 chr2 118316581 118316767 -132371087 + (TA)n Simple_repeat Simple_repeat 1 172 0 298 117 0 102 chr2 118316819 118317016 -132370838 + (TA)n Simple_repeat Simple_repeat 1 177 0 417 126 15 116 chr2 118317019 118317217 -132370637 + (CATATA)n Simple_repeat Simple_repeat 2 179 0 423 82 7 75 chr2 118317258 118317404 -132370450 + (TA)n Simple_repeat Simple_repeat 2 137 0 853 249 20 44 chr2 118317450 118317743 -132370111 + L1ME1 LINE L1 5837 6122 -44 467 239 29 7 chr2 118317644 118317782 -132370072 + L1MA10 LINE L1 6180 6320 -14 * 24 0 0 0 chr2 118318483 118318507 -132369347 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 118319568 118319591 -132368263 + AT_rich Low_complexity Low_complexity 1 23 0 1371 218 3 21 chr2 118319892 118320177 -132367677 + AluJo SINE Alu 3 282 -30 27 49 0 0 chr2 118322128 118322169 -132365685 + AT_rich Low_complexity Low_complexity 1 41 0 332 199 90 64 chr2 118322418 118322574 -132365280 + L1ME LINE L1 5338 5497 -667 1916 213 59 38 chr2 118322856 118323334 -132364520 - MLT1D LTR MaLR 0 505 18 206 356 27 40 chr2 118323381 118323530 -132364324 + MIR SINE MIR 6 152 -110 212 57 0 29 chr2 118325140 118325175 -132362679 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 201 176 0 0 chr2 118325494 118325528 -132362326 + A-rich Low_complexity Low_complexity 1 34 0 642 120 0 0 chr2 118325583 118325683 -132362171 + AluSg/x SINE Alu 211 310 0 739 300 46 54 chr2 118326177 118326527 -132361327 - L2 LINE L2 -4 3309 2963 302 0 26 0 chr2 118326641 118326679 -132361175 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1498 137 22 112 chr2 118326681 118327002 -132360852 - AluYb8 SINE Alu -26 292 1 21 0 0 0 chr2 118327044 118327065 -132360789 + AT_rich Low_complexity Low_complexity 1 21 0 807 58 48 0 chr2 118327187 118327291 -132360563 - L1PA7 LINE L1 -1 6153 6045 240 248 85 71 chr2 118327856 118327997 -132359857 - MIR SINE MIR -108 154 12 2656 186 47 31 chr2 118328016 118328788 -132359066 - LTR1 LTR ERV1 -1 784 1 473 151 16 24 chr2 118329897 118330023 -132357831 + CT-rich Low_complexity Low_complexity 4 128 0 894 137 0 28 chr2 118330023 118330205 -132357649 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 966 89 6 19 chr2 118330323 118330481 -132357373 + (TTTC)n Simple_repeat Simple_repeat 3 158 0 1816 153 0 7 chr2 118330481 118330763 -132357091 - AluSx SINE Alu -32 280 1 2817 175 79 40 chr2 118330763 118330822 -132357032 + MER73 LTR ERVL 16 71 -573 2193 122 0 0 chr2 118330822 118331125 -132356729 + AluSq SINE Alu 1 303 -10 2817 175 79 40 chr2 118331125 118331670 -132356184 + MER73 LTR ERVL 71 644 0 387 0 0 0 chr2 118331676 118331719 -132356135 + (TG)n Simple_repeat Simple_repeat 2 44 0 575 295 80 5 chr2 118331721 118331945 -132355909 + LTR16A LTR ERVL 208 448 -2 371 289 71 98 chr2 118332042 118332308 -132355546 - L2 LINE L2 0 3272 3014 374 74 53 32 chr2 118333014 118333109 -132354745 + (TAGA)n Simple_repeat Simple_repeat 4 100 0 324 336 83 40 chr2 118333840 118334177 -132353677 + L1MC4a LINE L1 5326 5698 -2110 1731 142 10 30 chr2 118334177 118334479 -132353375 + AluJb SINE Alu 1 296 -16 324 336 83 40 chr2 118334479 118334698 -132353156 + L1MC4a LINE L1 5698 5906 -1902 272 235 24 24 chr2 118334948 118335033 -132352821 + (TATATG)n Simple_repeat Simple_repeat 5 89 0 24 32 0 0 chr2 118336262 118336293 -132351561 + AT_rich Low_complexity Low_complexity 1 31 0 2243 117 0 0 chr2 118336301 118336599 -132351255 + AluSx SINE Alu 3 300 -12 1290 241 142 12 chr2 118336700 118337131 -132350723 - MER97b DNA MER1_type? -485 568 82 228 310 35 0 chr2 118337159 118337246 -132350608 - MER97c DNA MER1_type? -996 94 5 292 264 17 92 chr2 118337429 118337603 -132350251 - MER117 DNA MER1_type -36 161 1 704 157 15 37 chr2 118337777 118337911 -132349943 + AluSx SINE Alu 40 170 -142 239 102 0 20 chr2 118337917 118337966 -132349888 + (CAAAAA)n Simple_repeat Simple_repeat 1 48 0 212 313 10 50 chr2 118338505 118338604 -132349250 - L2 LINE L2 -4 3268 3174 925 205 18 40 chr2 118339257 118339481 -132348373 + MER20 DNA MER1_type 1 219 0 181 263 0 25 chr2 118339861 118339941 -132347913 + A-rich Low_complexity Low_complexity 5 82 0 285 253 32 32 chr2 118340298 118340393 -132347461 + MIR SINE MIR 153 247 -15 1758 249 67 41 chr2 118340426 118341036 -132346818 + MLT1E2 LTR MaLR 1 626 0 640 271 128 30 chr2 118341108 118341437 -132346417 - MER57A LTR ERV1 0 403 74 2126 316 111 4 chr2 118341626 118342574 -132345280 + MER69 DNA AcHobo 1 1049 -1477 291 277 92 8 chr2 118342670 118342800 -132345054 + MER69 DNA AcHobo 1071 1211 -1315 25 65 0 0 chr2 118342850 118342896 -132344958 + AT_rich Low_complexity Low_complexity 1 46 0 369 136 0 30 chr2 118343135 118343201 -132344653 - AluJo SINE Alu 0 302 239 7819 149 85 40 chr2 118343205 118344827 -132343027 - pTR5 LTR ERV1 0 2438 743 805 232 0 0 chr2 118344827 118344982 -132342872 - AluJo SINE Alu -71 241 87 309 261 0 17 chr2 118344982 118345097 -132342757 + MER69 DNA AcHobo 2394 2506 -20 354 292 0 11 chr2 118345612 118345701 -132342153 + LTR28 LTR ERV1 929 1016 -4 253 298 161 16 chr2 118345715 118345839 -132342015 + L2 LINE L2 3168 3309 -4 287 216 128 65 chr2 118346101 118346254 -132341600 - L1ME LINE L1 -279 5842 5679 255 61 0 0 chr2 118346314 118346347 -132341507 + (CA)n Simple_repeat Simple_repeat 2 34 0 2127 226 10 30 chr2 118346583 118347078 -132340776 + MER74A LTR ERVL 74 558 0 214 240 40 0 chr2 118347354 118347404 -132340450 + L2 LINE L2 3262 3313 0 213 208 42 0 chr2 118348421 118348469 -132339385 + L2 LINE L2 3264 3313 0 32 57 0 0 chr2 118348828 118348881 -132338973 + AT_rich Low_complexity Low_complexity 1 53 0 399 127 0 0 chr2 118348930 118348993 -132338861 + (T)n Simple_repeat Simple_repeat 1 63 0 4664 185 45 18 chr2 118349100 118350151 -132337703 - L1MEc LINE L1 -2931 3609 2588 2097 150 11 8 chr2 118350151 118350504 -132337350 + THE1A LTR MaLR 1 354 -1 11258 105 11 9 chr2 118350506 118352081 -132335773 + THE1A-int LTR MaLR 2 1580 0 2216 135 8 8 chr2 118352081 118352436 -132335418 + THE1A LTR MaLR 1 355 0 7059 222 50 27 chr2 118352436 118355118 -132332736 - L1PA12 LINE L1 -4006 3578 24 2013 103 3 3 chr2 118355140 118355446 -132332408 - AluY SINE Alu 0 306 1 3976 225 97 41 chr2 118355484 118355603 -132332251 - L1MEc LINE L1 -5200 1340 1229 2336 143 29 70 chr2 118355603 118356049 -132331805 - MSTA LTR MaLR 0 428 1 3976 225 97 41 chr2 118356049 118356953 -132330901 - L1MEc LINE L1 -5311 1229 236 207 0 0 0 chr2 118356953 118356976 -132330878 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3976 225 97 41 chr2 118356976 118357173 -132330681 - L1MEc LINE L1 -6304 236 51 212 179 0 0 chr2 118357173 118357212 -132330642 + A-rich Low_complexity Low_complexity 1 39 0 488 75 21 32 chr2 118363078 118363171 -132324683 + (GAAA)n Simple_repeat Simple_repeat 4 95 0 22 0 0 0 chr2 118364849 118364871 -132322983 + AT_rich Low_complexity Low_complexity 1 22 0 423 321 67 67 chr2 118364950 118365308 -132322546 + MLT1I LTR MaLR 26 383 -26 23 33 0 0 chr2 118365670 118365700 -132322154 + AT_rich Low_complexity Low_complexity 1 30 0 438 221 144 0 chr2 118366559 118366663 -132321191 + Tigger1 DNA MER2_type 33 151 -2267 * 1200 158 5 23 chr2 118366659 118366880 -132320974 + Tigger1 DNA MER2_type 2202 2418 0 223 187 107 53 chr2 118366947 118367022 -132320832 + MIR SINE MIR 108 186 -76 269 306 14 0 chr2 118367085 118367157 -132320697 + L2 LINE L2 3184 3256 -16 412 300 79 18 chr2 118367800 118368027 -132319827 + L3b LINE CR1 1102 1342 -241 430 244 55 40 chr2 118368349 118368550 -132319304 + L1MB8 LINE L1 5174 5377 -769 1368 269 52 18 chr2 118368609 118368864 -132318990 + L1MB8 LINE L1 5616 5861 -317 718 280 33 9 chr2 118368864 118369075 -132318779 - MER20 DNA MER1_type -2 217 2 1368 269 52 18 chr2 118369075 118369362 -132318492 + L1MB8 LINE L1 5861 6176 -2 23 33 0 0 chr2 118369465 118369495 -132318359 + AT_rich Low_complexity Low_complexity 1 30 0 491 254 8 133 chr2 118369520 118369760 -132318094 + MER58C DNA MER1_type 5 214 -1 345 317 168 10 chr2 118369765 118369967 -132317887 + L1M2 LINE L1 2370 2603 -4246 1272 277 63 31 chr2 118369972 118370491 -132317363 + L1ME2 LINE L1 1730 2259 -3956 5190 160 13 12 chr2 118370491 118371393 -132316461 + MER4D LTR ERV1 1 903 0 1272 277 63 31 chr2 118371393 118371742 -132316112 + L1ME2 LINE L1 2259 2595 -3620 3055 20 0 0 chr2 118371789 118372144 -132315710 + L1PA2 LINE L1 5801 6155 0 248 283 135 17 chr2 118372144 118372381 -132315473 + L1ME2 LINE L1 2575 2839 -3376 2075 254 121 34 chr2 118372501 118374262 -132313592 + L1ME2 LINE L1 4052 5966 -267 268 252 34 109 chr2 118374292 118374543 -132313311 + L1P2 LINE L1 5322 5561 -593 265 312 24 8 chr2 118374722 118374847 -132313007 + L1ME LINE L1 5730 5856 -314 2812 164 47 2 chr2 118375781 118376312 -132311542 - L1MC1 LINE L1 0 6333 5779 258 128 0 0 chr2 118376376 118376415 -132311439 - L1MC/D LINE L1 -508 5825 5787 844 171 67 80 chr2 118377501 118377794 -132310060 - MER34B LTR ERV1 -20 545 257 1545 158 45 2 chr2 118377794 118378242 -132309612 - MER34B LTR ERV1 0 565 3 776 219 88 22 chr2 118378244 118378483 -132309371 - MER34B LTR ERV1 -306 259 10 751 245 43 0 chr2 118379606 118379790 -132308064 + MER58B DNA MER1_type 131 322 -19 210 211 19 106 chr2 118379842 118379946 -132307908 - MIR SINE MIR -67 195 101 1480 162 195 12 chr2 118380606 118380940 -132306914 + MER31B LTR ERV1 17 411 -55 203 152 0 91 chr2 118381837 118381903 -132305951 - MER5C DNA MER1_type -16 308 249 255 142 104 194 chr2 118382012 118382146 -132305708 - MER5C DNA MER1_type -201 123 2 336 272 88 18 chr2 118382161 118382275 -132305579 + MER5B DNA MER1_type 7 128 -50 32 75 0 0 chr2 118382938 118383005 -132304849 + AT_rich Low_complexity Low_complexity 1 67 0 249 139 0 0 chr2 118383195 118383238 -132304616 + (ATG)n Simple_repeat Simple_repeat 2 44 0 1574 189 35 59 chr2 118384964 118385335 -132302519 + MER57A LTR ERV1 42 403 0 397 233 25 138 chr2 118387157 118387397 -132300457 + MER34C LTR ERV1 40 252 -333 1682 162 165 28 chr2 118387433 118387797 -132300057 + MSTB LTR MaLR 1 414 -12 293 229 120 62 chr2 118387821 118388077 -132299777 + MER34 LTR ERV1 281 530 -12 617 296 30 26 chr2 118388823 118389053 -132298801 + MIR SINE MIR 3 233 -29 2977 156 4 8 chr2 118389286 118389785 -132298069 - LOR1a LTR ERV1 0 497 1 301 330 10 0 chr2 118390447 118390544 -132297310 - MER94 DNA DNA -19 115 18 189 250 42 14 chr2 118391100 118391172 -132296682 - L2 LINE L2 -81 3232 3159 372 277 157 13 chr2 118391246 118391405 -132296449 + L2 LINE L2 3128 3309 -4 * 1147 307 110 27 chr2 118391398 118391766 -132296088 - L2 LINE L2 -141 3172 2836 1078 189 13 53 chr2 118391766 118391994 -132295860 + MER20 DNA MER1_type 1 219 0 1147 307 110 27 chr2 118391994 118392360 -132295494 - L2 LINE L2 -477 2836 2351 1486 132 180 6 chr2 118392362 118392711 -132295143 + MSTB LTR MaLR 1 426 0 223 154 0 0 chr2 118392711 118392750 -132295104 - L2 LINE L2 -961 2353 2315 631 258 60 22 chr2 118392751 118392933 -132294921 + MER39 LTR ERV1 3 191 -516 * 1858 193 25 18 chr2 118392927 118393326 -132294528 + MER39 LTR ERV1 306 707 0 455 342 77 13 chr2 118393326 118393560 -132294294 - L2 LINE L2 -995 2319 2071 211 289 0 0 chr2 118393919 118393964 -132293890 + (TG)n Simple_repeat Simple_repeat 2 46 0 322 416 42 51 chr2 118394009 118394365 -132293489 + L2 LINE L2 2886 3238 -34 42 0 0 0 chr2 118394366 118394408 -132293446 + AT_rich Low_complexity Low_complexity 1 42 0 204 97 0 0 chr2 118395054 118395085 -132292769 + (CA)n Simple_repeat Simple_repeat 2 32 0 374 164 0 0 chr2 118395157 118395218 -132292636 + L1MA4A LINE L1 4706 4766 -1380 3451 141 32 11 chr2 118395258 118395881 -132291973 + L1MA4A LINE L1 5665 6300 -3 1836 137 7 40 chr2 118395881 118396181 -132291673 - AluSx SINE Alu -22 290 1 345 301 18 9 chr2 118396465 118396578 -132291276 + MIR SINE MIR 149 262 0 351 227 0 0 chr2 118397374 118397471 -132290383 + CT-rich Low_complexity Low_complexity 3 99 0 1767 174 124 64 chr2 118397509 118397871 -132289983 - LTR44 LTR ERV1 -8 511 111 2049 142 3 0 chr2 118397871 118398174 -132289680 - AluSp SINE Alu -9 304 1 1767 174 124 64 chr2 118398174 118398293 -132289561 - LTR44 LTR ERV1 -408 111 1 204 97 0 0 chr2 118398619 118398650 -132289204 + (CA)n Simple_repeat Simple_repeat 2 32 0 310 264 109 0 chr2 118399021 118399131 -132288723 + MIR SINE MIR 78 199 -63 602 313 65 4 chr2 118399961 118400207 -132287647 + MLT1I LTR MaLR 59 319 -90 340 317 31 6 chr2 118400209 118400370 -132287484 - L1ME3A LINE L1 -43 6127 5963 1481 287 43 26 chr2 118400380 118400806 -132287048 - L1ME3A LINE L1 -250 5920 5503 2092 147 94 10 chr2 118400806 118401201 -132286653 + MSTA LTR MaLR 1 428 0 1481 287 43 26 chr2 118401201 118401712 -132286142 - L1ME3A LINE L1 -667 5503 4960 353 308 53 18 chr2 118401862 118402089 -132285765 - L1ME3A LINE L1 -2360 3786 3552 239 336 39 19 chr2 118402761 118402865 -132284989 + MIR SINE MIR 34 139 -123 235 331 41 33 chr2 118402874 118402995 -132284859 + L2 LINE L2 2658 2779 -535 443 335 44 38 chr2 118403087 118403427 -132284427 + L2 LINE L2 2929 3270 -43 291 54 0 0 chr2 118403450 118403487 -132284367 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 186 353 15 0 chr2 118404628 118404696 -132283158 + MIR SINE MIR 194 262 0 278 321 12 24 chr2 118405192 118405360 -132282494 + (TATG)n Simple_repeat Simple_repeat 2 167 0 191 146 24 49 chr2 118405583 118405624 -132282230 + MIR SINE MIR 211 250 -12 256 302 9 28 chr2 118405962 118406068 -132281786 - LTR16B LTR ERVL 0 464 361 246 186 0 0 chr2 118406172 118406215 -132281639 - LTR16B LTR ERVL -355 109 67 375 331 73 11 chr2 118406495 118406673 -132281181 + MIR SINE MIR 1 189 -73 1453 125 22 3 chr2 118406675 118407005 -132280849 - L1P4 LINE L1 -685 5483 5150 3112 99 17 4 chr2 118407015 118407479 -132280375 + L1PA10 LINE L1 5688 6157 -11 380 296 52 101 chr2 118407516 118407783 -132280071 - MIR SINE MIR -6 256 3 246 213 49 0 chr2 118409287 118409348 -132278506 + MER103 DNA DNA 101 164 -2 224 231 19 0 chr2 118410755 118410807 -132277047 - L2 LINE L2 -54 3259 3207 472 293 153 27 chr2 118410858 118411080 -132276774 - MIR SINE MIR -10 252 3 24 0 0 0 chr2 118411262 118411286 -132276568 + AT_rich Low_complexity Low_complexity 1 24 0 2175 125 0 0 chr2 118411295 118411590 -132276264 + AluSq SINE Alu 1 295 -18 1863 156 3 86 chr2 118411686 118412071 -132275783 - MLT1B LTR MaLR 0 390 38 192 369 19 10 chr2 118412084 118412187 -132275667 + MIR SINE MIR 92 195 -67 443 267 46 46 chr2 118412321 118412516 -132275338 + L2 LINE L2 3119 3313 0 7587 28 0 0 chr2 118413205 118414614 -132273240 - L1PA3 LINE L1 0 6155 4748 15420 31 2 1 chr2 118414614 118416489 -132271365 + L1PA3 LINE L1 2874 4750 -1396 6275 220 110 31 chr2 118416850 118418868 -132268986 - L1MC3 LINE L1 -12 7773 5597 307 330 40 23 chr2 118418885 118419061 -132268793 + L2 LINE L2 2893 3071 -201 183 42 0 0 chr2 118419662 118419686 -132268168 + (CA)n Simple_repeat Simple_repeat 1 24 0 353 290 69 0 chr2 118420552 118420683 -132267171 + MIR SINE MIR 106 245 -17 373 328 38 0 chr2 118421901 118422027 -132265827 + MIR SINE MIR 20 153 -62 391 330 18 0 chr2 118422194 118422303 -132265551 + MER5A DNA MER1_type 69 179 -10 1402 206 47 27 chr2 118423986 118424282 -132263572 + AluJo SINE Alu 6 307 -5 209 184 58 115 chr2 118425931 118426018 -132261836 + MIR SINE MIR 110 191 -71 384 250 47 94 chr2 118426789 118426981 -132260873 - MIR SINE MIR -49 213 31 340 313 86 0 chr2 118427683 118427811 -132260043 - MIR3 SINE MIR -6 202 64 400 145 0 0 chr2 118428035 118428104 -132259750 - L1PB3 LINE L1 -2 6152 6084 21 0 0 0 chr2 118431905 118431926 -132255928 + AT_rich Low_complexity Low_complexity 1 21 0 477 298 119 14 chr2 118432842 118433127 -132254727 + L2 LINE L2 2362 2676 -638 926 347 77 19 chr2 118433144 118433623 -132254231 + L2 LINE L2 2805 3311 -2 24 32 0 0 chr2 118433791 118433822 -132254032 + AT_rich Low_complexity Low_complexity 1 31 0 1847 327 88 21 chr2 118434920 118435504 -132252350 - L1M4 LINE L1 -863 5283 4607 7530 31 0 0 chr2 118435504 118436657 -132251197 - L1PA4 LINE L1 -5 6150 4998 1847 327 88 21 chr2 118436657 118437035 -132250819 - L1M4 LINE L1 -1539 4607 4256 1327 215 129 50 chr2 118437035 118437315 -132250539 + L1ME2 LINE L1 5309 5565 -599 1667 213 35 49 chr2 118437315 118437743 -132250111 - MSTB LTR MaLR -4 422 1 1327 215 129 50 chr2 118437743 118438019 -132249835 + L1ME2 LINE L1 5565 5986 -178 518 328 72 49 chr2 118438190 118438700 -132249154 + L1ME3A LINE L1 1025 1460 -4924 1892 160 0 0 chr2 118438745 118439032 -132248822 + AluSc SINE Alu 1 287 -22 405 332 93 8 chr2 118439266 118439525 -132248329 + L1ME3A LINE L1 4076 4356 -2026 1331 260 61 13 chr2 118439583 118440040 -132247814 + L1ME3A LINE L1 5731 6209 -197 4919 231 39 23 chr2 118440055 118443096 -132244758 + L1MA4 LINE L1 14 3090 -3238 1341 162 5 0 chr2 118443102 118443306 -132244548 + AluJo SINE Alu 6 210 -102 875 219 0 9 chr2 118443316 118443544 -132244310 + L1MA4 LINE L1 3093 3318 -3010 733 233 15 25 chr2 118444022 118444224 -132243630 + L1MEc LINE L1 2945 3144 -3238 1234 176 5 0 chr2 118444230 118444434 -132243420 + AluJo SINE Alu 6 210 -102 3068 241 68 20 chr2 118444444 118445117 -132242737 + L1MEc LINE L1 3147 3885 -2497 1258 7 0 13 chr2 118445117 118445270 -132242584 + (GAA)n Simple_repeat Simple_repeat 1 151 0 3068 241 68 20 chr2 118445270 118445596 -132242258 + L1MEc LINE L1 3885 4194 -2188 3314 92 17 52 chr2 118445598 118445857 -132241997 + L1PB1 LINE L1 5227 5493 -658 2163 123 10 0 chr2 118445857 118446166 -132241688 + AluSx SINE Alu 1 312 0 3314 92 17 52 chr2 118446166 118446177 -132241677 + L1PB1 LINE L1 5493 5503 -648 2370 91 7 0 chr2 118446177 118446485 -132241369 + AluY SINE Alu 1 310 -1 3314 92 17 52 chr2 118446485 118446798 -132241056 + L1PB1 LINE L1 5503 5791 -360 306 73 0 0 chr2 118446800 118446841 -132241013 + (TG)n Simple_repeat Simple_repeat 2 42 0 2428 99 25 3 chr2 118446846 118447208 -132240646 + L1PB1 LINE L1 5782 6151 0 730 169 31 0 chr2 118447237 118447367 -132240487 + AluJo SINE Alu 1 134 -178 5813 193 9 19 chr2 118447399 118447635 -132240219 + L1MA4 LINE L1 4147 4384 -2098 838 143 0 23 chr2 118447635 118447768 -132240086 + FLAM_C SINE Alu 1 130 -3 5813 193 9 19 chr2 118447768 118449892 -132237962 + L1MA4 LINE L1 4384 6482 0 329 277 109 0 chr2 118449882 118450019 -132237835 + L1M4 LINE L1 4699 4850 -1296 * 1978 139 52 27 chr2 118450021 118450387 -132237467 + THE1C LTR MaLR 1 375 0 8765 159 12 34 chr2 118450389 118451940 -132235914 + THE1C-int LTR MaLR 3 1520 -60 303 177 0 0 chr2 118451943 118452005 -132235849 - MST-int LTR MaLR -1142 509 448 * 433 152 50 61 chr2 118451970 118452069 -132235785 - L1PBa LINE L1 -6132 731 634 968 186 10 15 chr2 118452069 118452268 -132235586 - L1PBa LINE L1 -6663 200 3 544 220 8 8 chr2 118452302 118452434 -132235420 + L1M4 LINE L1 4966 5097 -1049 1712 169 8 28 chr2 118452451 118452813 -132235041 + L1MA5 LINE L1 5940 6294 -6 295 250 62 39 chr2 118452893 118453021 -132234833 + L1ME3A LINE L1 6031 6161 -9 259 211 79 0 chr2 118453487 118453563 -132234291 - MER102a DNA MER1_type -1 329 248 477 306 117 45 chr2 118453593 118453884 -132233970 - MER102a DNA MER1_type -18 312 1 231 271 0 0 chr2 118454069 118454128 -132233726 + (TG)n Simple_repeat Simple_repeat 2 60 0 228 35 0 0 chr2 118455004 118455033 -132232821 + (CA)n Simple_repeat Simple_repeat 2 30 0 246 326 41 10 chr2 118455041 118455139 -132232715 - MIR SINE MIR -121 141 41 4976 197 51 50 chr2 118455986 118457333 -132230521 + L1MB1 LINE L1 3871 5219 -927 1251 99 0 0 chr2 118457504 118458144 -132229710 + (CCTAT)n Simple_repeat Simple_repeat 1 640 0 302 169 15 0 chr2 118458638 118458703 -132229151 + (TA)n Simple_repeat Simple_repeat 2 67 0 4392 47 0 0 chr2 118459899 118460435 -132227419 + L1PA5 LINE L1 5618 6153 -1 1159 190 13 22 chr2 118460785 118461011 -132226843 + MER58A DNA MER1_type 1 224 0 1851 175 0 3 chr2 118461430 118461722 -132226132 - AluJb SINE Alu -21 291 1 2213 119 38 24 chr2 118461936 118462306 -132225548 - THE1C LTR MaLR 0 375 1 2129 180 18 42 chr2 118462896 118463397 -132224457 - L1MA10 LINE L1 -2 6332 5844 1528 166 14 10 chr2 118463403 118463698 -132224156 + L1MA10 LINE L1 5540 5835 -354 265 309 24 8 chr2 118463992 118464115 -132223739 - LTR33 LTR ERVL -4 517 393 456 287 138 10 chr2 118464650 118464845 -132223009 - LTR33 LTR ERVL -253 268 49 1877 174 19 29 chr2 118465355 118465734 -132222120 - THE1C LTR MaLR 0 375 1 180 0 0 0 chr2 118466684 118466704 -132221150 + (A)n Simple_repeat Simple_repeat 1 20 0 399 316 60 6 chr2 118467426 118467594 -132220260 - LTR16C LTR ERVL -30 461 285 3574 120 41 0 chr2 118467678 118468235 -132219619 + LTR19B LTR ERV1 1 580 0 1381 209 36 4 chr2 118468736 118469014 -132218840 - AluJo SINE Alu -25 287 1 405 295 44 61 chr2 118469303 118469760 -132218094 - HAL1b LINE L1 -750 598 150 2436 74 0 0 chr2 118470055 118470353 -132217501 - AluY SINE Alu -13 298 1 1249 235 96 16 chr2 118470615 118470989 -132216865 - L1ME2 LINE L1 -62 6102 5699 585 225 71 28 chr2 118471535 118471717 -132216137 - MIR SINE MIR -22 240 51 2110 145 3 0 chr2 118472127 118472438 -132215416 - AluSq SINE Alu -1 312 1 536 111 0 12 chr2 118472889 118472970 -132214884 + MADE1 DNA Mariner 1 80 0 494 328 73 32 chr2 118474479 118474726 -132213128 - MIR SINE MIR 0 262 6 2324 36 57 0 chr2 118475649 118475929 -132211925 - AluY SINE Alu -15 296 1 258 350 122 9 chr2 118476421 118476635 -132211219 - MIR SINE MIR -5 257 20 1218 154 13 21 chr2 118478599 118478833 -132209021 + MLT2D LTR ERVL 1 232 -182 334 176 29 15 chr2 118478840 118478908 -132208946 + MLT2D LTR ERVL 347 415 -49 443 115 58 29 chr2 118478927 118479101 -132208753 + (TA)n Simple_repeat Simple_repeat 2 180 0 1726 185 17 6 chr2 118479417 118479773 -132208081 - MER46B DNA MER2_type -1 235 1 25 0 0 0 chr2 118481879 118481904 -132205950 + AT_rich Low_complexity Low_complexity 1 25 0 17206 188 25 7 chr2 118482477 118483297 -132204557 - L1PA14 LINE L1 -1 6811 6007 1688 173 21 11 chr2 118483297 118483580 -132204274 - AluJb SINE Alu -21 291 6 17206 188 25 7 chr2 118483580 118487250 -132200604 - L1PA14 LINE L1 -805 6007 2230 1375 228 95 110 chr2 118487251 118488209 -132199645 + LTR1B LTR ERV1 1 1020 0 10490 218 61 7 chr2 118488209 118489404 -132198450 - L1PA14 LINE L1 -4576 2211 852 5924 72 29 3 chr2 118489404 118490164 -132197690 + LTR17 LTR ERV1 1 780 0 10490 218 61 7 chr2 118490164 118491065 -132196789 - L1PA14 LINE L1 -5935 852 1 3530 182 94 6 chr2 118491168 118491959 -132195895 - L1MC3 LINE L1 0 7785 6926 365 186 70 0 chr2 118492225 118492311 -132195543 - L1ME4a LINE L1 -67 6054 5963 32 43 0 0 chr2 118492345 118492391 -132195463 + AT_rich Low_complexity Low_complexity 1 46 0 638 219 78 16 chr2 118492731 118492973 -132194881 + L1MDa LINE L1 1087 1343 -5197 * 3107 271 57 16 chr2 118492954 118494274 -132193580 + L1M4 LINE L1 2856 4229 -1917 1337 188 48 7 chr2 118494274 118494545 -132193309 + L1MD1 LINE L1 5949 6230 -12 741 274 33 0 chr2 118494545 118494757 -132193097 - L1ME1 LINE L1 -82 6084 5866 258 313 70 40 chr2 118495575 118495776 -132192078 - L2 LINE L2 0 3313 3107 21 36 0 0 chr2 118498131 118498159 -132189695 + AT_rich Low_complexity Low_complexity 1 28 0 6476 150 16 6 chr2 118498367 118500522 -132187332 - L1MA3 LINE L1 -5 6300 4124 222 222 37 0 chr2 118500886 118500940 -132186914 - L2 LINE L2 -2 3311 3256 1315 231 10 17 chr2 118501367 118501661 -132186193 + AluJo SINE Alu 3 294 -18 298 167 46 19 chr2 118501854 118501962 -132185892 + (CATATA)n Simple_repeat Simple_repeat 3 113 0 29 47 0 0 chr2 118502935 118502978 -132184876 + AT_rich Low_complexity Low_complexity 1 43 0 549 265 87 30 chr2 118502984 118503248 -132184606 - L1MC5 LINE L1 -384 7577 7299 334 315 221 30 chr2 118503738 118504068 -132183786 - L2 LINE L2 0 3313 2921 610 253 16 53 chr2 118504094 118504284 -132183570 - L2 LINE L2 -867 2447 2265 227 435 82 0 chr2 118505225 118505395 -132182459 + L2 LINE L2 2869 3052 -220 1969 164 3 3 chr2 118505603 118505974 -132181880 - L1M2 LINE L1 -532 5780 5410 491 261 123 50 chr2 118505977 118506062 -132181792 - LTR38 LTR ERV1 -19 537 460 4501 113 6 27 chr2 118506062 118506768 -132181086 - LTR8 LTR ERV1 0 691 1 491 261 123 50 chr2 118506768 118507103 -132180751 - LTR38 LTR ERV1 -96 460 86 1130 198 28 3 chr2 118507205 118507493 -132180361 + L1MA9 LINE L1 5996 6290 -22 335 171 132 0 chr2 118508521 118508597 -132179257 + MER39 LTR ERV1 4 89 -618 1670 217 51 61 chr2 118508606 118509178 -132178676 + LTR8A LTR ERV1 34 599 -128 277 208 50 75 chr2 118509229 118509349 -132178505 + LTR48 LTR ERV1 523 639 -148 592 186 0 0 chr2 118509349 118509592 -132178262 - FLAM_A SINE Alu 0 272 30 335 214 44 50 chr2 118509601 118509760 -132178094 + MER39 LTR ERV1 550 707 0 886 163 35 0 chr2 118510293 118510465 -132177389 + MLT-int LTR MaLR 1403 1580 -155 413 180 0 45 chr2 118510494 118510518 -132177336 - LTR29 LTR ERV1 -59 563 539 2764 22 0 0 chr2 118510518 118510829 -132177025 + AluY SINE Alu 1 311 0 413 180 0 45 chr2 118510829 118510893 -132176961 - LTR29 LTR ERV1 -83 539 479 1888 119 68 7 chr2 118510893 118511261 -132176593 + LTR7 LTR ERV1 1 450 0 1028 187 26 45 chr2 118511261 118511697 -132176157 + HERVH LTR ERV1 1 459 -7254 8972 152 6 28 chr2 118511755 118513411 -132174443 + HERVH LTR ERV1 800 2419 -5294 2230 118 18 8 chr2 118513407 118513789 -132174065 + HERVH LTR ERV1 3608 3993 -3720 * 1823 205 9 3 chr2 118513775 118514195 -132173659 + HERVH LTR ERV1 3959 4600 -2054 * 1074 143 11 0 chr2 118514183 118514372 -132173482 + HERVH LTR ERV1 6758 6948 -765 * 324 36 0 89 chr2 118514366 118514422 -132173432 + HERVH LTR ERV1 7663 7713 0 * 3180 113 7 32 chr2 118514423 118514978 -132172876 + HERVH LTR ERV1 7173 7713 0 1839 110 82 11 chr2 118514978 118515344 -132172510 + LTR7 LTR ERV1 1 450 0 2163 173 45 15 chr2 118515344 118515545 -132172309 - LTR29 LTR ERV1 -139 483 290 3916 132 72 56 chr2 118515545 118516312 -132171542 - MER4E LTR ERV1 0 779 1 2163 173 45 15 chr2 118516312 118516573 -132171281 - LTR29 LTR ERV1 -332 290 7 207 0 0 0 chr2 118516601 118516624 -132171230 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 2151 108 0 0 chr2 118516626 118516904 -132170950 - AluSg SINE Alu -32 278 1 662 221 0 0 chr2 118516905 118517045 -132170809 + MLT1A1-int LTR MaLR 1596 1735 0 2315 27 10 24 chr2 118517085 118517380 -132170474 - L1PA4 LINE L1 -3 6152 5862 1435 220 11 25 chr2 118517381 118517735 -132170119 + MLT1A1 LTR MaLR 17 365 0 2359 61 3 3 chr2 118517966 118518262 -132169592 - AluY SINE Alu -15 296 1 26 0 0 0 chr2 118518270 118518296 -132169558 + AT_rich Low_complexity Low_complexity 1 26 0 354 23 0 0 chr2 118518349 118518392 -132169462 + (TTA)n Simple_repeat Simple_repeat 2 44 0 34 55 0 0 chr2 118519571 118519626 -132168228 + AT_rich Low_complexity Low_complexity 1 55 0 327 131 33 0 chr2 118519626 118519687 -132168167 - U7 snRNA snRNA 0 63 1 610 210 167 19 chr2 118519760 118520017 -132167837 + MER5C DNA MER1_type 6 300 -24 1601 212 0 7 chr2 118520017 118520305 -132167549 + AluJo SINE Alu 1 286 -26 453 62 0 0 chr2 118520305 118520370 -132167484 + (TA)n Simple_repeat Simple_repeat 1 65 0 23 0 0 0 chr2 118520774 118520797 -132167057 + AT_rich Low_complexity Low_complexity 1 23 0 1716 176 0 29 chr2 118521203 118521509 -132166345 - AluJb SINE Alu -15 297 1 1183 275 130 30 chr2 118521543 118522082 -132165772 - MLT1E LTR MaLR 0 593 1 820 270 93 27 chr2 118522807 118523333 -132164521 - L1M4c LINE L1 -2642 4315 3755 431 290 97 52 chr2 118523350 118523757 -132164097 - L1M4c LINE L1 -4139 2999 2551 2205 107 0 13 chr2 118523757 118524065 -132163789 + AluSg SINE Alu 6 309 -1 431 290 97 52 chr2 118524065 118524308 -132163546 - L1M4c LINE L1 -4587 2551 2320 32 26 0 0 chr2 118524333 118524372 -132163482 + AT_rich Low_complexity Low_complexity 1 39 0 502 305 92 5 chr2 118524412 118524829 -132163025 - L1M4c LINE L1 -4707 2250 1696 2359 117 3 6 chr2 118524837 118525187 -132162667 - THE1B LTR MaLR -15 349 1 10085 116 47 10 chr2 118525191 118526389 -132161465 - THE1B-int LTR MaLR -4 1576 309 2244 105 3 0 chr2 118526389 118526683 -132161171 + AluSp SINE Alu 1 295 -18 10085 116 47 10 chr2 118526683 118527004 -132160850 - THE1B-int LTR MaLR -1271 309 1 2453 110 3 50 chr2 118527004 118527217 -132160637 - THE1B LTR MaLR 0 364 175 2173 80 13 26 chr2 118527217 118527530 -132160324 + AluSc SINE Alu 1 309 0 2453 110 3 50 chr2 118527530 118527698 -132160156 - THE1B LTR MaLR -189 175 1 607 290 84 50 chr2 118527752 118528049 -132159805 - L1M4c LINE L1 -5196 1663 1357 2352 148 0 39 chr2 118528058 118528518 -132159336 - L1MA4 LINE L1 -6 6294 5853 521 88 12 0 chr2 118528518 118528598 -132159256 + (TTCC)n Simple_repeat Simple_repeat 1 81 0 2243 79 0 3 chr2 118528598 118528889 -132158965 - AluY SINE Alu -21 290 1 2159 168 65 53 chr2 118528889 118529490 -132158364 - L1MA4 LINE L1 -439 5861 5254 284 254 18 26 chr2 118530187 118530301 -132157553 - L1M4c LINE L1 -6656 203 91 381 297 74 40 chr2 118530972 118531147 -132156707 + MIR SINE MIR 13 193 -69 22 56 0 0 chr2 118531793 118531829 -132156025 + AT_rich Low_complexity Low_complexity 1 36 0 1156 217 77 12 chr2 118531945 118532268 -132155586 + MER2 DNA MER2_type 1 344 0 238 355 53 13 chr2 118533079 118533155 -132154699 + MIR SINE MIR 20 98 -164 326 339 54 0 chr2 118533242 118533372 -132154482 + MIR3 SINE MIR 64 200 -8 611 230 21 0 chr2 118533517 118533708 -132154146 - L1MA7 LINE L1 -11 6280 6086 239 340 107 60 chr2 118533811 118534196 -132153658 + L2 LINE L2 2910 3312 -1 23 0 0 0 chr2 118535798 118535821 -132152033 + AT_rich Low_complexity Low_complexity 1 23 0 40053 40 24 2 chr2 118535948 118541966 -132145888 + L1PA2 LINE L1 1 6155 0 1562 128 30 131 chr2 118542034 118542370 -132145484 - AluSx SINE Alu 0 302 1 489 17 0 0 chr2 118542810 118542868 -132144986 + (TA)n Simple_repeat Simple_repeat 2 59 0 3431 84 4 2 chr2 118543226 118543678 -132144176 - MLT2A2 LTR ERVL 0 453 1 2246 103 0 31 chr2 118543718 118544038 -132143816 - AluSq SINE Alu 0 313 4 192 40 0 0 chr2 118544064 118544089 -132143765 + (A)n Simple_repeat Simple_repeat 1 25 0 400 269 47 57 chr2 118544708 118544920 -132142934 - MLT1J LTR MaLR -2 509 300 2318 134 31 54 chr2 118544923 118545402 -132142452 - LTR44 LTR ERV1 -2 517 50 310 128 0 0 chr2 118545473 118545520 -132142334 - LTR44 LTR ERV1 -472 47 1 1913 157 80 52 chr2 118546661 118547040 -132140814 - L1MA7 LINE L1 -3 6288 5890 2400 124 22 6 chr2 118547040 118547395 -132140459 + THE1B LTR MaLR 2 362 -2 1913 157 80 52 chr2 118547395 118547530 -132140324 - L1MA7 LINE L1 -401 5890 5760 2087 123 3 0 chr2 118547530 118547547 -132140307 - AluSp SINE Alu -13 300 285 408 40 0 0 chr2 118547547 118547597 -132140257 + (TG)n Simple_repeat Simple_repeat 1 50 0 2087 123 3 0 chr2 118547597 118547864 -132139990 - AluSp SINE Alu -28 285 15 6429 87 19 4 chr2 118547876 118548840 -132139014 - MER11B LTR ERVK -119 1147 1 4278 192 38 3 chr2 118548841 118549830 -132138024 - L1 LINE L1 -1553 4593 3570 264 315 13 40 chr2 118550347 118550496 -132137358 + MLT1H LTR MaLR 108 252 -297 26 0 0 0 chr2 118550770 118550796 -132137058 + AT_rich Low_complexity Low_complexity 1 26 0 1275 165 19 0 chr2 118550925 118551137 -132136717 + MSTA LTR MaLR 213 428 0 8839 179 32 8 chr2 118551137 118552587 -132135267 + MSTA-int LTR MaLR 1 1494 -157 236 71 48 0 chr2 118552587 118552629 -132135225 + T-rich Low_complexity Low_complexity 1 44 0 8839 179 32 8 chr2 118552629 118552791 -132135063 + MSTA-int LTR MaLR 1494 1651 0 1907 171 33 3 chr2 118552791 118553154 -132134700 + MSTA LTR MaLR 1 374 -54 21 0 0 31 chr2 118553156 118553167 -132134687 + AT_rich Low_complexity Low_complexity 1 11 -20 1918 147 3 17 chr2 118553167 118553467 -132134387 - AluSx SINE Alu -16 296 1 21 0 0 31 chr2 118553467 118553487 -132134367 + AT_rich Low_complexity Low_complexity 11 31 0 308 307 90 12 chr2 118553525 118553691 -132134163 - MIR SINE MIR -37 225 47 245 292 11 22 chr2 118554050 118554139 -132133715 - MER113 DNA MER1_type? -22 499 412 402 274 35 50 chr2 118554201 118554402 -132133452 - L1ME3A LINE L1 -109 6061 5864 25 51 0 0 chr2 118554862 118554901 -132132953 + AT_rich Low_complexity Low_complexity 1 39 0 195 129 0 0 chr2 118554915 118554946 -132132908 + (CA)n Simple_repeat Simple_repeat 2 32 0 2063 148 0 0 chr2 118555256 118555554 -132132300 + AluSx SINE Alu 1 298 -14 1951 158 0 0 chr2 118556675 118556973 -132130881 - AluSx SINE Alu -14 298 1 311 294 151 31 chr2 118557076 118557368 -132130486 - L1ME4a LINE L1 -7 6114 5746 763 283 54 52 chr2 118557368 118557813 -132130041 + MLT1J1 LTR MaLR 1 446 0 311 294 151 31 chr2 118557813 118557976 -132129878 - L1ME4a LINE L1 -375 5746 5604 859 245 35 56 chr2 118558846 118559132 -132128722 - MER92C LTR ERV1 0 554 275 327 214 0 52 chr2 118559130 118559225 -132128629 - MER92C LTR ERV1 -245 309 148 * 449 330 42 53 chr2 118559275 118559539 -132128315 - L2 LINE L2 -480 2834 2574 2227 104 7 0 chr2 118560167 118560466 -132127388 + AluSx SINE Alu 1 301 -11 2474 35 0 0 chr2 118561132 118561415 -132126439 - AluY SINE Alu -9 302 20 35 88 0 0 chr2 118561621 118561712 -132126142 + AT_rich Low_complexity Low_complexity 1 91 0 22 70 0 0 chr2 118561776 118561819 -132126035 + AT_rich Low_complexity Low_complexity 1 43 0 554 333 0 12 chr2 118561910 118562078 -132125776 - MIR SINE MIR -85 177 12 196 273 91 91 chr2 118562700 118562821 -132125033 - L2 LINE L2 -11 3261 3141 1080 306 62 35 chr2 118563252 118563931 -132123923 - ERVL LTR ERVL -4096 1668 972 2075 123 33 0 chr2 118563959 118564260 -132123594 - AluSx SINE Alu 0 312 2 1847 27 0 0 chr2 118564353 118564573 -132123281 + L1PA2 LINE L1 5936 6155 0 2145 122 0 0 chr2 118565096 118565408 -132122446 + AluSx SINE Alu 1 312 0 923 278 78 23 chr2 118565572 118565917 -132121937 + ERVL LTR ERVL 4622 4985 -779 712 323 16 8 chr2 118565990 118566244 -132121610 + ERVL LTR ERVL 5113 5368 -396 2162 28 0 0 chr2 118566509 118566763 -132121091 + L1PA4 LINE L1 5897 6150 -5 643 254 291 14 chr2 118566883 118567233 -132120621 + LTR50 LTR ERVL 20 466 -329 365 227 189 0 chr2 118567249 118567381 -132120473 + LTR50 LTR ERVL 613 769 -26 685 321 46 0 chr2 118567766 118568006 -132119848 + MIR SINE MIR 6 256 -6 404 295 82 41 chr2 118568796 118569307 -132118547 + L1MC4a LINE L1 5413 5645 -476 737 285 60 35 chr2 118572507 118573076 -132114778 - L1MC5 LINE L1 -86 7875 7293 296 64 21 0 chr2 118573781 118573828 -132114026 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1674 160 47 0 chr2 118573837 118574112 -132113742 - AluJb SINE Alu -19 293 6 845 195 51 81 chr2 118574545 118574781 -132113073 + MER106A DNA MER1_type 8 236 0 225 180 0 0 chr2 118575280 118575330 -132112524 + GA-rich Low_complexity Low_complexity 1 50 0 857 98 8 8 chr2 118575839 118575972 -132111882 - L1PA10 LINE L1 -1 6167 6035 304 273 50 33 chr2 118576281 118576402 -132111452 + MIR SINE MIR 113 235 -27 214 280 0 0 chr2 118576933 118576983 -132110871 - MIR SINE MIR -7 255 206 327 323 59 36 chr2 118577538 118577758 -132110096 - MIR SINE MIR -27 235 11 187 279 0 0 chr2 118578567 118578610 -132109244 - L2 LINE L2 0 3272 3230 2394 63 0 7 chr2 118579231 118579533 -132108321 - AluY SINE Alu -11 300 1 226 241 205 0 chr2 118579703 118579786 -132108068 - MIR SINE MIR -50 212 113 315 323 21 0 chr2 118579996 118580092 -132107762 + L2 LINE L2 3210 3307 -6 360 208 0 0 chr2 118583339 118583435 -132104419 + CT-rich Low_complexity Low_complexity 2 97 0 207 114 0 0 chr2 118584179 118584214 -132103640 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 215 173 19 0 chr2 118584242 118584294 -132103560 + (TA)n Simple_repeat Simple_repeat 1 53 0 254 244 0 44 chr2 118584294 118584384 -132103470 + L1MC4 LINE L1 6614 6699 -1343 270 96 39 0 chr2 118584978 118585030 -132102824 + (TA)n Simple_repeat Simple_repeat 1 54 0 246 178 55 0 chr2 118585099 118585172 -132102682 + (TA)n Simple_repeat Simple_repeat 2 78 0 512 155 97 77 chr2 118585859 118586014 -132101840 + L1ME2 LINE L1 6006 6163 -1 351 321 47 35 chr2 118586026 118586316 -132101538 + L1M4 LINE L1 4616 4914 -1232 1339 219 50 0 chr2 118586316 118586599 -132101255 + AluJo SINE Alu 1 297 -15 351 321 47 35 chr2 118586599 118586738 -132101116 + L1M4 LINE L1 4914 5050 -1096 245 297 56 39 chr2 118586782 118587196 -132100658 + L1ME3A LINE L1 3026 3446 -2700 421 303 35 104 chr2 118587197 118587620 -132100234 + L1ME3A LINE L1 3522 3915 -2231 371 356 205 10 chr2 118587732 118588044 -132099810 + MLT1J2 LTR MaLR 78 450 0 988 127 20 0 chr2 118588252 118588567 -132099287 + L1M3 LINE L1 5351 5699 -469 10258 147 2 25 chr2 118588571 118590366 -132097488 + L1P LINE L1 3076 4829 -1317 192 77 0 0 chr2 118590722 118590748 -132097106 + (CA)n Simple_repeat Simple_repeat 1 26 0 280 282 81 28 chr2 118590840 118591088 -132096766 + L1ME3A LINE L1 5100 5360 -786 338 291 182 18 chr2 118591282 118591612 -132096242 + L1ME3A LINE L1 5567 5950 -220 22 35 0 0 chr2 118591776 118591805 -132096049 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 118591828 118591850 -132096004 + AT_rich Low_complexity Low_complexity 1 22 0 659 246 29 12 chr2 118592619 118592790 -132095064 + MER5A DNA MER1_type 10 183 -6 1861 220 105 22 chr2 118593308 118593862 -132093992 + MER50 LTR ERV1 135 734 0 280 325 56 24 chr2 118594301 118594427 -132093427 - L2 LINE L2 -1 3271 3142 475 297 105 75 chr2 118594673 118594939 -132092915 - L2 LINE L2 0 3272 2999 208 109 73 55 chr2 118595942 118595997 -132091857 + GA-rich Low_complexity Low_complexity 2 57 0 240 86 0 0 chr2 118596349 118596384 -132091470 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2001 103 7 0 chr2 118596828 118597162 -132090692 - AluSq SINE Alu 0 336 1 3501 181 93 11 chr2 118598960 118599943 -132087911 - L1MA9 LINE L1 -4 6308 5155 635 214 28 0 chr2 118599939 118600084 -132087770 + L1MA9 LINE L1 5008 5156 -990 * 795 297 165 32 chr2 118600116 118600217 -132087637 - L2 LINE L2 -90 3223 3137 2064 139 0 0 chr2 118600217 118600511 -132087343 + AluSx SINE Alu 1 294 -18 795 297 165 32 chr2 118600511 118601115 -132086739 - L2 LINE L2 -176 3137 2418 305 305 157 33 chr2 118601605 118601936 -132085918 - MARNA DNA Mariner -197 389 18 484 316 89 6 chr2 118602732 118602890 -132084964 + MIR3 SINE MIR 30 200 -8 4619 191 22 35 chr2 118603370 118603752 -132084102 - L1PB2 LINE L1 -7 6860 6475 2356 82 0 0 chr2 118603752 118604058 -132083796 - AluY SINE Alu 0 311 6 4619 191 22 35 chr2 118604058 118605336 -132082518 - L1PB2 LINE L1 -392 6475 5214 626 221 25 0 chr2 118605338 118605496 -132082358 - L1PB2 LINE L1 -1569 5293 5132 7416 36 0 0 chr2 118605494 118606567 -132081287 - L1PA4 LINE L1 -2 6153 5078 8465 35 4 0 chr2 118606567 118607587 -132080267 + L1PA4 LINE L1 4054 5077 -1069 9145 247 25 27 chr2 118607591 118613423 -132074431 - L1PB2 LINE L1 -1724 5138 41 * 11465 224 26 36 chr2 118613422 118613539 -132074315 + L1PA16 LINE L1 1764 1881 -4285 11409 82 17 0 chr2 118613539 118615871 -132071983 + L1PA7 LINE L1 3804 6161 0 11465 224 26 36 chr2 118615871 118620190 -132067664 + L1PA16 LINE L1 1881 6157 -9 397 79 0 63 chr2 118620556 118620619 -132067235 + L1MC1 LINE L1 6265 6323 -10 3343 29 2 14 chr2 118620698 118621117 -132066737 + L1PA4 LINE L1 5741 6154 -1 21 0 0 0 chr2 118621418 118621439 -132066415 + AT_rich Low_complexity Low_complexity 1 21 0 203 372 62 0 chr2 118621774 118621919 -132065935 + MIR SINE MIR 104 257 -5 309 169 217 24 chr2 118622136 118622219 -132065635 + MER58 DNA MER1_type 1 99 -2321 451 179 84 0 chr2 118622231 118622326 -132065528 + MER58 DNA MER1_type 2318 2420 0 6723 30 0 1 chr2 118622593 118623387 -132064467 - L1PA4 LINE L1 -8 6147 5355 1585 48 5 5 chr2 118623384 118623592 -132064262 + L1PA4 LINE L1 5145 5352 -794 * 700 286 102 19 chr2 118623711 118624036 -132063818 - MLT1I LTR MaLR -51 358 7 1781 314 63 15 chr2 118624042 118624767 -132063087 + L2 LINE L2 552 1311 -2003 296 306 131 11 chr2 118624770 118624923 -132062931 + MER5A DNA MER1_type 4 178 -11 1425 286 46 56 chr2 118624953 118625565 -132062289 + L2 LINE L2 2057 2662 -652 651 275 12 23 chr2 118625584 118625755 -132062099 - MER8 DNA MER2_type -70 169 1 22 0 0 0 chr2 118625913 118625935 -132061919 + AT_rich Low_complexity Low_complexity 1 22 0 497 303 58 21 chr2 118625979 118626220 -132061634 - L1ME LINE L1 -340 5781 5532 189 0 0 0 chr2 118626443 118626464 -132061390 + (A)n Simple_repeat Simple_repeat 1 21 0 694 222 82 6 chr2 118627353 118627524 -132060330 - MER5A DNA MER1_type -5 184 1 266 167 0 0 chr2 118627798 118627846 -132060008 + MER53 DNA DNA 136 183 -6 1425 309 76 30 chr2 118629002 118629835 -132058019 - ERVL LTR ERVL -328 5436 4566 696 299 54 4 chr2 118630393 118630634 -132057220 - MIR SINE MIR -8 254 2 2011 129 4 0 chr2 118631024 118631302 -132056552 + AluSx SINE Alu 1 279 -33 220 355 57 8 chr2 118632967 118633091 -132054763 + MIR3 SINE MIR 74 203 -5 23 0 0 0 chr2 118633701 118633724 -132054130 + AT_rich Low_complexity Low_complexity 1 23 0 423 305 30 71 chr2 118633969 118634166 -132053688 + MLT1L LTR MaLR 3 191 -424 307 309 103 18 chr2 118634188 118634353 -132053501 - MLT1L LTR MaLR -65 550 372 399 309 19 49 chr2 118634833 118634863 -132052991 - MIR3 SINE MIR -28 180 151 1080 196 9 14 chr2 118634863 118635083 -132052771 - MER20 DNA MER1_type 0 219 1 399 309 19 49 chr2 118635083 118635214 -132052640 - MIR3 SINE MIR -57 151 24 804 309 142 23 chr2 118635303 118635746 -132052108 - MLT1J LTR MaLR -8 503 8 193 156 0 0 chr2 118635833 118635865 -132051989 + L2 LINE L2 3265 3296 -17 216 67 0 0 chr2 118636097 118636127 -132051727 + (TTA)n Simple_repeat Simple_repeat 2 31 0 2320 163 128 0 chr2 118637571 118638062 -132049792 + L1P LINE L1 4337 4890 -1256 273 160 40 0 chr2 118638062 118638112 -132049742 - HSMAR1 DNA Mariner -695 592 541 21 36 0 0 chr2 118638349 118638377 -132049477 + AT_rich Low_complexity Low_complexity 1 28 0 357 280 72 57 chr2 118638448 118638712 -132049142 - L1MC4a LINE L1 -1779 6029 5762 1769 223 41 9 chr2 118639921 118640357 -132047497 + L1MD3 LINE L1 7527 7976 -19 787 228 33 11 chr2 118640631 118640811 -132047043 - MER5A DNA MER1_type -1 188 5 490 305 49 32 chr2 118640929 118641428 -132046426 + L1MEd LINE L1 1028 1579 -4731 956 208 42 23 chr2 118641863 118642079 -132045775 - L1MA9 LINE L1 -213 6099 5880 358 145 13 40 chr2 118642096 118642172 -132045682 - L1M3a LINE L1 -5109 846 773 1223 144 0 0 chr2 118642174 118642348 -132045506 + AluSg/x SINE Alu 133 306 -6 355 321 137 43 chr2 118642348 118642625 -132045229 - L1M3a LINE L1 -5176 779 477 2661 261 78 27 chr2 118642713 118644622 -132043232 - L1 LINE L1 -3785 2597 777 338 294 109 91 chr2 118644818 118645083 -132042771 - L1M3c LINE L1 -5224 917 648 185 250 42 0 chr2 118645650 118645698 -132042156 - L2 LINE L2 0 3272 3223 22 56 0 0 chr2 118645945 118645981 -132041873 + AT_rich Low_complexity Low_complexity 1 36 0 1065 224 109 37 chr2 118645986 118646126 -132041728 - MER2 DNA MER2_type 0 344 215 2428 84 0 3 chr2 118646126 118646437 -132041417 + AluY SINE Alu 1 310 -1 1065 224 109 37 chr2 118646437 118646617 -132041237 - MER2 DNA MER2_type -129 215 1 457 251 92 41 chr2 118646950 118647145 -132040709 - L2 LINE L2 0 3313 3109 225 320 78 16 chr2 118648784 118648912 -132038942 - L2 LINE L2 -202 3070 2935 338 346 96 4 chr2 118648955 118649235 -132038619 + L1ME LINE L1 5496 5801 -320 766 269 74 81 chr2 118649303 118649761 -132038093 + LTR16A1 LTR ERVL 1 455 -2 23 0 0 0 chr2 118649767 118649790 -132038064 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 118650955 118650976 -132036878 + AT_rich Low_complexity Low_complexity 1 21 0 288 0 0 0 chr2 118651067 118651099 -132036755 + (CA)n Simple_repeat Simple_repeat 1 32 0 214 177 16 16 chr2 118651153 118651215 -132036639 + GA-rich Low_complexity Low_complexity 1 62 0 216 326 33 11 chr2 118651325 118651417 -132036437 + MIR3 SINE MIR 109 202 -6 282 289 56 63 chr2 118652554 118652696 -132035158 - L2 LINE L2 -8 3305 3165 1190 281 69 65 chr2 118652739 118653603 -132034251 + L1MEc LINE L1 45 912 -5484 2056 131 7 0 chr2 118653622 118653920 -132033934 - AluSx SINE Alu -12 300 1 3166 236 51 34 chr2 118653986 118656023 -132031831 - L1M4 LINE L1 -917 5229 3027 25 0 0 0 chr2 118657742 118657767 -132030087 + AT_rich Low_complexity Low_complexity 1 25 0 12871 88 32 4 chr2 118658094 118660062 -132027792 - HERVH LTR ERV1 -5689 2024 1 3532 51 0 7 chr2 118660064 118660515 -132027339 - LTR7 LTR ERV1 -2 448 1 291 54 0 0 chr2 118660866 118660903 -132026951 + (TA)n Simple_repeat Simple_repeat 2 38 0 381 264 146 66 chr2 118661048 118661336 -132026518 + L1MA4 LINE L1 1512 1822 -5744 528 250 18 18 chr2 118661479 118661707 -132026147 - L1 LINE L1 -1419 4727 4500 330 190 0 0 chr2 118661718 118661776 -132026078 - L1P LINE L1 -1576 4570 4513 7393 34 0 0 chr2 118661883 118662942 -132024912 - L1PA4 LINE L1 -18 6137 5078 4910 40 15 0 chr2 118662942 118663599 -132024255 + L1P LINE L1 4054 4720 -1426 6846 96 23 17 chr2 118663701 118664821 -132023033 + HERVH LTR ERV1 1869 2995 -4718 819 136 27 0 chr2 118664800 118664947 -132022907 + HERVH LTR ERV1 3140 3290 -4423 * 3119 119 2 6 chr2 118664937 118665441 -132022413 + HERVH LTR ERV1 3492 3993 -3720 3803 154 6 6 chr2 118665443 118666105 -132021749 + HERVH LTR ERV1 4488 5149 -2564 1356 125 19 0 chr2 118666106 118666322 -132021532 + HERVH LTR ERV1 5600 5819 -1894 2324 95 46 0 chr2 118666325 118666695 -132021159 + HERVH LTR ERV1 7327 7713 0 3273 52 0 69 chr2 118666695 118667176 -132020678 + LTR7 LTR ERV1 1 448 -2 24 32 0 0 chr2 118667503 118667534 -132020320 + AT_rich Low_complexity Low_complexity 1 31 0 10921 206 29 35 chr2 118667667 118669059 -132018795 + L1MA4 LINE L1 2914 4312 -3253 2401 57 3 20 chr2 118669059 118669358 -132018496 + AluY SINE Alu 1 294 -17 10921 206 29 35 chr2 118669358 118670189 -132017665 + L1MA4 LINE L1 4312 5146 -2419 2320 88 7 7 chr2 118670189 118670495 -132017359 + AluSx SINE Alu 5 310 -2 10921 206 29 35 chr2 118670495 118671046 -132016808 + L1MA4 LINE L1 5146 5699 -1866 2272 89 7 7 chr2 118671046 118671348 -132016506 + AluY SINE Alu 2 303 -8 10921 206 29 35 chr2 118671348 118671967 -132015887 + L1MA4 LINE L1 5699 6291 -1274 2358 167 39 7 chr2 118671967 118672380 -132015474 - MSTB LTR MaLR 0 426 1 10921 206 29 35 chr2 118672380 118672691 -132015163 + L1MA4 LINE L1 6291 6602 -963 625 217 38 11 chr2 118672698 118672921 -132014933 + L1MA4 LINE L1 5952 6170 -130 452 209 0 16 chr2 118672909 118673038 -132014816 + L1MA4 LINE L1 6601 6727 -838 * 823 182 34 14 chr2 118673038 118673247 -132014607 + Tigger2 DNA MER2_type 1 213 -2505 1733 163 0 0 chr2 118673248 118673530 -132014324 + Tigger2 DNA MER2_type 464 745 -1973 1304 183 20 0 chr2 118673592 118673844 -132014010 + Tigger2 DNA MER2_type 2462 2718 0 4844 168 14 7 chr2 118673852 118674818 -132013036 + L1MA4 LINE L1 6742 7714 -5 541 341 77 26 chr2 118675367 118675783 -132012071 + HERV16 LTR ERVL 2401 2837 -2159 896 312 82 24 chr2 118676029 118676443 -132011411 + HERV16 LTR ERVL 2401 2838 -2158 316 310 18 9 chr2 118676461 118676574 -132011280 + HERV16 LTR ERVL 2978 3091 -1905 489 317 18 72 chr2 118676821 118677264 -132010590 + HERV16 LTR ERVL 3988 4377 -619 398 330 58 5 chr2 118677908 118678114 -132009740 + LTR16A LTR ERVL 1 217 -233 335 270 16 63 chr2 118679623 118679749 -132008105 - MER5A DNA MER1_type -53 136 17 323 194 31 31 chr2 118680108 118680206 -132007648 + MER103 DNA DNA 2 99 -67 1422 82 4 98 chr2 118680427 118680682 -132007172 - L1PB1 LINE L1 0 6151 5921 5717 230 24 16 chr2 118680682 118680936 -132006918 - L1MCa LINE L1 -2374 4052 3802 351 0 0 0 chr2 118680936 118680975 -132006879 + (TTG)n Simple_repeat Simple_repeat 1 39 0 5717 230 24 16 chr2 118680975 118682607 -132005247 - L1MCa LINE L1 -2624 3802 1614 17420 209 57 13 chr2 118682611 118682690 -132005164 + L1MA2 LINE L1 17 91 -7632 210 37 0 0 chr2 118682690 118682717 -132005137 + (CA)n Simple_repeat Simple_repeat 2 28 0 17420 209 57 13 chr2 118682717 118690005 -131997849 + L1MA2 LINE L1 91 7722 -1 5348 215 29 16 chr2 118690022 118690349 -131997505 - L1PBa LINE L1 -4334 2529 2208 1527 181 7 14 chr2 118690349 118690641 -131997213 + AluJb SINE Alu 1 290 -22 5348 215 29 16 chr2 118690641 118693154 -131994700 - L1PBa LINE L1 -4655 2208 601 1015 293 44 16 chr2 118693175 118693680 -131994174 - L1PBa LINE L1 -6342 521 3 2765 259 64 51 chr2 118693691 118693720 -131994134 + L1ME LINE L1 1976 2003 -4212 3485 168 67 29 chr2 118693720 118694516 -131993338 - LTR1B LTR ERV1 0 826 1 2765 259 64 51 chr2 118694516 118694539 -131993315 + L1ME LINE L1 2003 2024 -4191 4959 106 14 9 chr2 118694539 118695301 -131992553 + MER4E LTR ERV1 1 766 0 2765 259 64 51 chr2 118695301 118697234 -131990620 + L1ME LINE L1 2024 3947 -2268 676 254 157 25 chr2 118697250 118697569 -131990285 + L1ME LINE L1 5371 5731 -504 481 239 44 6 chr2 118697580 118697739 -131990115 + L1MA10 LINE L1 6170 6334 0 426 279 64 43 chr2 118697761 118698534 -131989320 + L1MEd LINE L1 433 1257 -4862 32 43 0 0 chr2 118698582 118698628 -131989226 + AT_rich Low_complexity Low_complexity 1 46 0 394 303 101 66 chr2 118699232 118699430 -131988424 - L3 LINE CR1 -5 1572 1368 467 266 120 19 chr2 118699486 118699696 -131988158 - MIR SINE MIR 0 262 29 470 213 0 0 chr2 118700127 118700202 -131987652 + FRAM/FAM SINE Alu 10 84 -92 1128 143 52 81 chr2 118700760 118701032 -131986822 - L1PA10 LINE L1 0 6168 5905 483 77 0 0 chr2 118701025 118701090 -131986764 + L1PA10 LINE L1 5838 5902 -272 * 372 333 57 68 chr2 118701094 118701373 -131986481 - L2 LINE L2 -5 3267 2992 1655 226 50 32 chr2 118701468 118701964 -131985890 - MLT1D LTR MaLR 0 505 1 378 281 118 8 chr2 118702167 118702413 -131985441 + LTR16A LTR ERVL 157 429 -21 2316 78 0 0 chr2 118702661 118702989 -131984865 - AluY SINE Alu 0 328 1 440 282 69 5 chr2 118703010 118703212 -131984642 - HAL1 LINE L1 -884 1623 1409 399 113 0 0 chr2 118703282 118703344 -131984510 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 204 40 0 0 chr2 118704933 118704958 -131982896 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 370 318 115 7 chr2 118705158 118705306 -131982548 + MIR SINE MIR 22 185 -77 272 299 131 23 chr2 118705643 118705857 -131981997 + L2 LINE L2 2979 3215 -98 295 280 62 99 chr2 118705975 118706186 -131981668 + MIR3 SINE MIR 5 207 -1 198 299 10 93 chr2 118707301 118707398 -131980456 - MIR3 SINE MIR -31 177 89 267 282 13 60 chr2 118707882 118708031 -131979823 - L1MC4a LINE L1 -1910 5898 5757 460 344 70 36 chr2 118708653 118708955 -131978899 - HAL1 LINE L1 -738 1769 1458 192 77 0 0 chr2 118709219 118709245 -131978609 + (CATATA)n Simple_repeat Simple_repeat 2 27 0 644 332 85 11 chr2 118709300 118709676 -131978178 + L1ME LINE L1 139 542 -5663 388 270 7 15 chr2 118709926 118710063 -131977791 + L1ME LINE L1 1844 1979 -4417 651 297 172 44 chr2 118710145 118710853 -131977001 - L1M4 LINE L1 -2440 3706 2908 707 217 64 64 chr2 118711019 118711222 -131976632 + MER63A DNA MER1_type 5 207 -3 292 283 37 65 chr2 118711311 118711668 -131976186 - L1M4 LINE L1 -3597 2549 2204 22 0 0 0 chr2 118711737 118711759 -131976095 + AT_rich Low_complexity Low_complexity 1 22 0 304 293 101 30 chr2 118712073 118712370 -131975484 - HAL1b LINE L1 -510 838 521 244 369 0 0 chr2 118712384 118712487 -131975367 + L2 LINE L2 3211 3313 0 625 308 14 29 chr2 118713270 118713478 -131974376 - MIR SINE MIR -10 252 48 710 258 86 47 chr2 118713885 118714118 -131973736 + MIR SINE MIR 2 243 -19 349 325 26 8 chr2 118714218 118714335 -131973519 - MIR3 SINE MIR -54 154 36 1446 161 3 102 chr2 118714356 118714679 -131973175 - AluJo SINE Alu -21 291 1 243 141 16 62 chr2 118714742 118714806 -131973048 + (TATATG)n Simple_repeat Simple_repeat 1 61 0 24 32 0 0 chr2 118714840 118714871 -131972983 + AT_rich Low_complexity Low_complexity 1 31 0 206 203 13 25 chr2 118715259 118715338 -131972516 + (TTA)n Simple_repeat Simple_repeat 3 80 0 672 282 68 49 chr2 118715554 118715983 -131971871 + L1M4 LINE L1 3859 4295 -1851 2127 114 26 10 chr2 118716180 118716488 -131971366 + AluSq SINE Alu 1 313 0 1931 153 8 33 chr2 118716883 118717249 -131970605 + L1PA13 LINE L1 5807 6163 0 2229 53 43 17 chr2 118718761 118719063 -131968791 - AluY SINE Alu -1 310 1 21 82 0 0 chr2 118719080 118719129 -131968725 + AT_rich Low_complexity Low_complexity 1 49 0 2567 129 86 36 chr2 118720411 118720985 -131966869 + MER4B LTR ERV1 10 779 0 2028 21 0 0 chr2 118721268 118721501 -131966353 - L1PA3 LINE L1 -5 6150 5918 183 42 0 0 chr2 118722267 118722291 -131965563 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 665 100 0 36 chr2 118722291 118722401 -131965453 - AluY SINE Alu -33 278 173 416 256 143 8 chr2 118723056 118723189 -131964665 - MLT1H LTR MaLR -376 173 23 208 123 15 62 chr2 118723509 118723574 -131964280 + T-rich Low_complexity Low_complexity 5 66 0 196 98 0 39 chr2 118723587 118723638 -131964216 + (TTTTTA)n Simple_repeat Simple_repeat 2 50 0 487 67 0 124 chr2 118723701 118723755 -131964099 - MADE1 DNA Mariner -2 78 38 2029 90 0 8 chr2 118723755 118724022 -131963832 + AluSg SINE Alu 34 298 -12 487 67 0 124 chr2 118724022 118724056 -131963798 - MADE1 DNA Mariner -42 38 1 315 320 85 20 chr2 118724070 118724223 -131963631 - L3 LINE CR1 -38 1539 1377 1437 225 61 59 chr2 118724302 118724760 -131963094 - MLT1C LTR MaLR 0 467 9 301 292 50 17 chr2 118724776 118724896 -131962958 - L3 LINE CR1 -313 1264 1141 455 289 20 33 chr2 118725679 118725831 -131962023 + MIR SINE MIR 3 152 -110 292 107 36 0 chr2 118725844 118725900 -131961954 - L1MA4A LINE L1 -12 6291 6234 3815 81 15 20 chr2 118725901 118726445 -131961409 + L1PA7 LINE L1 5613 6153 -1 400 194 0 0 chr2 118726446 118726528 -131961326 + L1ME LINE L1 5588 5672 -492 * 312 27 0 0 chr2 118726530 118726567 -131961287 + (CA)n Simple_repeat Simple_repeat 2 38 0 598 165 0 9 chr2 118726567 118726669 -131961185 - L1MA4A LINE L1 -69 6234 6132 189 94 0 0 chr2 118726669 118726701 -131961153 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 751 212 75 0 chr2 118726703 118726849 -131961005 - AluJb SINE Alu -26 286 130 636 117 10 0 chr2 118726850 118726953 -131960901 - L1MA4A LINE L1 -162 6141 6038 269 269 0 15 chr2 118726953 118727020 -131960834 + MIR SINE MIR 169 234 -28 2899 234 29 38 chr2 118727057 118727169 -131960685 + L1ME1 LINE L1 4680 4792 -1374 1944 127 99 70 chr2 118727169 118727585 -131960269 + MSTA LTR MaLR 1 428 0 2899 234 29 38 chr2 118727585 118728205 -131959649 + L1ME1 LINE L1 4792 5417 -749 1459 212 11 4 chr2 118728205 118728483 -131959371 + AluJb SINE Alu 1 280 -32 2899 234 29 38 chr2 118728483 118729201 -131958653 + L1ME1 LINE L1 5417 6092 -74 776 120 0 70 chr2 118730814 118730956 -131956898 + AluJo SINE Alu 6 137 -175 1012 200 65 22 chr2 118731194 118731487 -131956367 + L1PA16 LINE L1 5905 6207 0 2784 22 0 0 chr2 118732162 118732473 -131955381 + AluY SINE Alu 1 311 0 457 257 203 14 chr2 118733005 118733153 -131954701 - MER5A DNA MER1_type 0 189 14 397 345 85 34 chr2 118733594 118733887 -131953967 + L3 LINE CR1 1180 1487 -90 2171 110 19 3 chr2 118734340 118734648 -131953206 + AluSq SINE Alu 1 313 0 317 266 72 18 chr2 118734669 118734921 -131952933 - LTR33 LTR ERVL 0 521 225 393 237 32 0 chr2 118735287 118735380 -131952474 + MER117 DNA MER1_type 42 137 -60 212 309 12 0 chr2 118735994 118736078 -131951776 - MIR SINE MIR -2 260 176 224 159 43 14 chr2 118736116 118736185 -131951669 + (TA)n Simple_repeat Simple_repeat 2 72 0 349 289 61 6 chr2 118736189 118736335 -131951519 + MER63 DNA MER1_type 672 1061 0 468 278 146 35 chr2 118736358 118736705 -131951149 - MLT1J1 LTR MaLR -21 425 68 288 303 81 0 chr2 118738850 118738949 -131948905 - L2 LINE L2 -11 3261 3155 445 335 62 4 chr2 118739120 118739347 -131948507 - MIR SINE MIR -3 259 20 186 301 80 53 chr2 118739913 118740026 -131947828 + MIR SINE MIR 20 135 -127 4504 181 31 9 chr2 118740165 118741029 -131946825 - L1MB3 LINE L1 -3 6180 5267 198 0 0 0 chr2 118741029 118741051 -131946803 + (TTG)n Simple_repeat Simple_repeat 3 24 0 4504 181 31 9 chr2 118741051 118741666 -131946188 - L1MB3 LINE L1 -916 5267 4667 1968 176 93 3 chr2 118741677 118742063 -131945791 + MSTA LTR MaLR 8 428 0 237 200 0 0 chr2 118742063 118742113 -131945741 - L1MB3 LINE L1 -1475 4671 4622 12441 229 26 19 chr2 118742682 118747345 -131940509 + L1PB3 LINE L1 599 5229 -1641 198 0 0 0 chr2 118747345 118747367 -131940487 + (CAA)n Simple_repeat Simple_repeat 3 24 0 12441 229 26 19 chr2 118747367 118748721 -131939133 + L1PB3 LINE L1 5229 6572 -298 2450 102 22 19 chr2 118748721 118749082 -131938772 - THE1B LTR MaLR 0 364 3 11124 110 10 2 chr2 118749084 118750652 -131937202 - THE1B-int LTR MaLR 0 1580 1 2248 136 11 19 chr2 118750652 118751019 -131936835 - THE1B LTR MaLR 0 364 1 12441 229 26 19 chr2 118751019 118752149 -131935705 + L1PB3 LINE L1 6571 6865 -5 1079 102 6 0 chr2 118752161 118752327 -131935527 + LOR1-int LTR ERV1 1537 1703 -6417 1620 206 75 67 chr2 118752350 118753111 -131934743 + LOR1-int LTR ERV1 1971 3730 -2868 1258 173 17 21 chr2 118753148 118753487 -131934367 + LOR1-int LTR ERV1 3731 4091 -2240 320 125 0 0 chr2 118753660 118753708 -131934146 + LOR1-int LTR ERV1 3786 3833 -4287 3283 149 88 58 chr2 118753708 118754379 -131933475 - LTR8 LTR ERV1 0 691 1 256 140 18 18 chr2 118754666 118754723 -131933131 + LOR1-int LTR ERV1 4783 4839 -1492 * 428 195 138 0 chr2 118754716 118754848 -131933006 + LOR1-int LTR ERV1 3950 6134 -624 1673 195 17 23 chr2 118754853 118755252 -131932602 + LOR1-int LTR ERV1 6384 7137 -4 733 166 0 0 chr2 118755271 118755406 -131932448 + MER49 LTR ERV1 145 281 -642 * 807 164 27 0 chr2 118755394 118755540 -131932314 + MER49 LTR ERV1 611 760 -163 349 219 24 24 chr2 118755540 118755622 -131932232 + LTR38-int LTR ERV1 1995 2076 -5046 333 315 14 14 chr2 118755737 118755880 -131931974 + LTR38-int LTR ERV1 2209 2351 -4771 848 311 19 22 chr2 118756049 118756412 -131931442 + LTR38-int LTR ERV1 7145 7506 -250 2974 169 24 9 chr2 118756612 118757158 -131930696 + LTR38 LTR ERV1 3 556 0 183 42 0 0 chr2 118757898 118757922 -131929932 + (TAA)n Simple_repeat Simple_repeat 1 24 0 868 272 69 75 chr2 118758039 118758576 -131929278 - L1ME3A LINE L1 -1 6169 5636 525 185 35 0 chr2 118758615 118758788 -131929066 + (TA)n Simple_repeat Simple_repeat 2 180 0 455 172 62 3 chr2 118758832 118759162 -131928692 + (TA)n Simple_repeat Simple_repeat 1 349 0 353 230 40 0 chr2 118759327 118759427 -131928427 + L1ME1 LINE L1 6046 6149 -17 * 3062 236 40 40 chr2 118759422 118760048 -131927806 - L1ME LINE L1 -392 5774 5149 2159 125 3 0 chr2 118760048 118760359 -131927495 - AluSx SINE Alu 0 312 1 3062 236 40 40 chr2 118760359 118761236 -131926618 - L1ME LINE L1 -1017 5149 4274 215 339 0 0 chr2 118761693 118761758 -131926096 - L2 LINE L2 -5 3267 3203 3048 126 57 29 chr2 118762110 118762658 -131925196 + LTR24B LTR ERV1 14 576 0 274 245 0 85 chr2 118762968 118763062 -131924792 - MIR3 SINE MIR -11 197 112 23 68 0 0 chr2 118763874 118763918 -131923936 + AT_rich Low_complexity Low_complexity 1 44 0 467 362 31 9 chr2 118763973 118764197 -131923657 - MIR SINE MIR -28 234 6 4131 136 25 3 chr2 118764415 118765126 -131922728 - L1MA5A LINE L1 -2 6295 5569 3000 173 20 100 chr2 118765956 118766578 -131921276 - L1MA4A LINE L1 0 7021 6351 263 78 20 0 chr2 118766578 118766629 -131921225 + LTR66 LTR ERVL 389 440 -170 3000 173 20 100 chr2 118766629 118766791 -131921063 - L1MA4A LINE L1 -670 6351 6178 1396 219 9 22 chr2 118766791 118767106 -131920748 - AluJo SINE Alu -1 311 1 3000 173 20 100 chr2 118767106 118767351 -131920503 - L1MA4A LINE L1 -843 6178 6140 2223 98 3 3 chr2 118767351 118767657 -131920197 - AluSc SINE Alu -3 306 1 3000 173 20 100 chr2 118767657 118768033 -131919821 - L1MA4A LINE L1 -881 6140 5736 1615 99 5 0 chr2 118768194 118768406 -131919448 + AluSc SINE Alu 1 213 -96 306 89 0 0 chr2 118768407 118768452 -131919402 + AluSc SINE Alu 253 297 -3 32 43 0 0 chr2 118768831 118768877 -131918977 + AT_rich Low_complexity Low_complexity 1 46 0 308 314 92 7 chr2 118769179 118769332 -131918522 - MIR SINE MIR -34 228 63 23 78 0 0 chr2 118769490 118769541 -131918313 + AT_rich Low_complexity Low_complexity 1 51 0 27 29 0 0 chr2 118769791 118769825 -131918029 + AT_rich Low_complexity Low_complexity 1 34 0 1052 274 91 47 chr2 118770432 118770815 -131917039 - MLT1I LTR MaLR -5 404 5 1220 161 103 115 chr2 118773174 118773564 -131914290 - MLT1B LTR MaLR 0 390 6 286 283 62 28 chr2 118774125 118774270 -131913584 + MIR3 SINE MIR 16 165 -43 1493 201 42 7 chr2 118774277 118774566 -131913288 + AluJb SINE Alu 1 299 -13 20111 24 0 0 chr2 118775626 118778097 -131909757 - L1P1 LINE L1 -693 5462 2993 9169 163 20 14 chr2 118778093 118782266 -131905588 - L1PBa LINE L1 -1819 5043 625 * 270 183 50 0 chr2 118782254 118782314 -131905540 - L1PBa LINE L1 -6666 197 135 * 4043 122 16 2 chr2 118782324 118782897 -131904957 - LTR9 LTR ERV1 0 612 32 7749 143 4 10 chr2 118782902 118783598 -131904256 - HUERS-P3 LTR ERV1 -4 8915 8227 2333 90 7 3 chr2 118783598 118783908 -131903946 - AluY SINE Alu 0 311 1 7749 143 4 10 chr2 118783908 118784391 -131903463 - HUERS-P3 LTR ERV1 -692 8227 7743 2770 153 9 9 chr2 118784388 118784839 -131903015 - HUERS-P3 LTR ERV1 -2372 6547 6097 * 1493 206 56 0 chr2 118784943 118785249 -131902605 + MLT1B LTR MaLR 68 390 0 296 275 55 9 chr2 118786853 118786962 -131900892 + MIR3 SINE MIR 2 115 -93 248 120 20 0 chr2 118787135 118787185 -131900669 + (TA)n Simple_repeat Simple_repeat 1 51 0 520 226 20 68 chr2 118787227 118787373 -131900481 + MER102b DNA MER1_type 195 333 -8 1644 176 85 0 chr2 118787684 118788036 -131899818 + L1MC1 LINE L1 5936 6317 -16 188 239 113 28 chr2 118788080 118788151 -131899703 + MIR SINE MIR 178 254 -8 194 308 0 0 chr2 118788533 118788585 -131899269 - L2 LINE L2 -12 3260 3209 200 244 0 0 chr2 118788622 118788667 -131899187 - MIR SINE MIR -119 143 99 260 270 102 77 chr2 118788673 118788869 -131898985 + L2 LINE L2 3113 3313 0 269 347 91 16 chr2 118789851 118790041 -131897813 + MIR SINE MIR 20 224 -38 186 118 0 0 chr2 118790684 118790718 -131897136 + (TAA)n Simple_repeat Simple_repeat 3 36 0 261 347 11 0 chr2 118791003 118791098 -131896756 + MIR3 SINE MIR 106 201 -7 546 300 24 36 chr2 118791823 118791862 -131895992 - MIR SINE MIR -11 251 213 2036 180 11 0 chr2 118791862 118792223 -131895631 - MLT1A1 LTR MaLR 0 365 1 546 300 24 36 chr2 118792223 118792433 -131895421 - MIR SINE MIR -49 213 5 284 330 20 0 chr2 118793911 118794011 -131893843 - L3 LINE CR1 -412 1165 1064 266 298 149 25 chr2 118794322 118794443 -131893411 - MIR3 SINE MIR -42 166 31 186 43 0 0 chr2 118794553 118794576 -131893278 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 424 338 91 54 chr2 118795233 118795674 -131892180 - L2 LINE L2 -9 3263 2807 218 320 165 0 chr2 118795893 118795990 -131891864 - L2 LINE L2 -2 3270 3158 231 245 3 0 chr2 118797066 118797118 -131890736 + MIR SINE MIR 106 157 -58 2317 98 3 3 chr2 118797316 118797623 -131890231 - AluSc SINE Alu -2 307 1 3193 185 43 21 chr2 118798273 118798664 -131889190 + L1MB3 LINE L1 5445 5861 -322 2013 105 65 0 chr2 118798664 118798941 -131888913 + AluSg SINE Alu 1 295 -15 3193 185 43 21 chr2 118798941 118799262 -131888592 + L1MB3 LINE L1 5861 6173 -10 2342 125 19 8 chr2 118800360 118800720 -131887134 + THE1B LTR MaLR 1 364 0 10442 117 33 1 chr2 118800720 118802251 -131885603 + THE1B-int LTR MaLR 1 1580 0 1858 111 25 63 chr2 118802251 118802567 -131885287 + THE1B LTR MaLR 1 304 -60 2110 112 45 0 chr2 118802568 118802881 -131884973 - L1PA8A LINE L1 -3 6128 5802 3951 86 6 4 chr2 118802881 118803730 -131884124 + L1PA8A LINE L1 4951 5799 -332 418 123 14 14 chr2 118803730 118803803 -131884051 + THE1B LTR MaLR 292 364 0 21 0 0 0 chr2 118804000 118804021 -131883833 + AT_rich Low_complexity Low_complexity 1 21 0 843 299 8 35 chr2 118804325 118804579 -131883275 - MLT1I LTR MaLR 0 409 163 259 350 49 24 chr2 118804959 118805123 -131882731 + MIR SINE MIR 46 212 -50 262 336 8 61 chr2 118805740 118805871 -131881983 - MER5A DNA MER1_type -1 188 65 492 303 11 23 chr2 118805903 118806078 -131881776 + MER5B DNA MER1_type 2 174 -4 24 0 0 0 chr2 118806370 118806394 -131881460 + AT_rich Low_complexity Low_complexity 1 24 0 292 295 155 8 chr2 118806446 118806575 -131881279 - MIR SINE MIR -95 167 20 526 343 75 13 chr2 118806775 118807014 -131880840 - LTR16A LTR ERVL -176 274 21 320 304 69 50 chr2 118807405 118807636 -131880218 - L1MEd LINE L1 -3111 3018 2793 2412 159 33 7 chr2 118807636 118808057 -131879797 + MSTB1 LTR MaLR 1 432 0 320 304 69 50 chr2 118808057 118808679 -131879175 - L1MEd LINE L1 -3336 2793 2149 1454 12 0 0 chr2 118809041 118809206 -131878648 - L1PA4 LINE L1 -254 5901 5737 1348 36 6 0 chr2 118809206 118809369 -131878485 + L1PA4 LINE L1 5988 6155 0 419 207 0 0 chr2 118809441 118809528 -131878326 + MSTB LTR MaLR 340 426 0 7709 217 24 26 chr2 118809530 118811178 -131876676 + MSTB-int LTR MaLR 3 1646 -5 1051 156 16 5 chr2 118811183 118811369 -131876485 + MSTB LTR MaLR 1 188 -238 322 258 16 16 chr2 118811576 118811704 -131876150 + (TTA)n Simple_repeat Simple_repeat 3 130 0 261 337 57 24 chr2 118811791 118812088 -131875766 - HAL1 LINE L1 -803 1704 1398 239 265 260 10 chr2 118812114 118812314 -131875540 - L1MEd LINE L1 -4883 1236 987 4362 110 20 13 chr2 118812331 118813032 -131874822 - L1MA3 LINE L1 -1 6304 5599 4131 195 20 10 chr2 118813046 118814747 -131873107 - L1PB3 LINE L1 -127 6084 4371 5121 30 0 0 chr2 118814754 118815357 -131872497 - L1PA2 LINE L1 -4 6151 5549 2535 89 11 0 chr2 118815460 118815819 -131872035 - HUERS-P3 LTR ERV1 -3258 5661 5299 749 62 44 18 chr2 118815828 118815941 -131871913 - L1PA8A LINE L1 -425 5706 5591 315 0 0 0 chr2 118815963 118815998 -131871856 + (CA)n Simple_repeat Simple_repeat 2 36 0 3458 137 6 23 chr2 118815998 118816769 -131871085 - HUERS-P3 LTR ERV1 -6625 793 575 1879 98 39 19 chr2 118816776 118817213 -131870641 - LTR9 LTR ERV1 -129 483 1 824 86 0 0 chr2 118817213 118817329 -131870525 - L1PBa LINE L1 -6745 118 3 2814 235 65 1 chr2 118817341 118818219 -131869635 - L1PB3 LINE L1 -2969 3234 2301 26797 124 13 68 chr2 118818225 118818608 -131869246 + L1PA8 LINE L1 12 415 -5757 207 114 0 0 chr2 118818608 118818643 -131869211 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 26797 124 13 68 chr2 118818643 118824794 -131863060 + L1PA8 LINE L1 415 6171 -1 4784 211 27 34 chr2 118824833 118825728 -131862126 - L1PB3 LINE L1 -3893 2310 1410 2157 63 41 4 chr2 118825728 118825997 -131861857 + AluY SINE Alu 23 301 -10 4784 211 27 34 chr2 118825997 118827363 -131860491 - L1PB3 LINE L1 -4793 1410 1 1208 289 30 15 chr2 118827330 118827728 -131860126 - L1PBa LINE L1 -5226 978 575 * 1307 314 45 23 chr2 118827947 118828820 -131859034 - L1PBa LINE L1 -5966 897 6 1926 165 33 0 chr2 118828836 118829419 -131858435 - L1M1 LINE L1 -696 7027 6423 * 14929 154 11 16 chr2 118829416 118831976 -131855878 - L1M1 LINE L1 -5005 2560 15 2999 94 7 0 chr2 118832018 118832445 -131855409 + LTR3 LTR ERVK 1 430 -2 3000 213 12 23 chr2 118833398 118833820 -131854034 - L1 LINE L1 -780 5366 4956 2128 119 3 7 chr2 118833820 118834115 -131853739 + AluSx SINE Alu 1 294 -18 3000 213 12 23 chr2 118834115 118834462 -131853392 - L1 LINE L1 -1190 4956 4606 1857 186 53 0 chr2 118834459 118834858 -131852996 + L1M2 LINE L1 5384 5803 -509 * 1527 158 11 77 chr2 118834891 118835257 -131852597 + L1MA9 LINE L1 5742 6083 -229 2422 200 15 11 chr2 118835257 118835731 -131852123 + MER70B LTR ERVL 1 476 -102 235 94 0 0 chr2 118835729 118835761 -131852093 + MER70A LTR ERVL 441 472 0 * 301 148 86 0 chr2 118835767 118835848 -131852006 + L1MA9 LINE L1 6203 6290 -22 526 205 47 24 chr2 118838741 118838868 -131848986 + MLT1D LTR MaLR 1 130 -375 1266 222 58 19 chr2 118838869 118839230 -131848624 - MLT1B LTR MaLR 0 390 16 9106 198 47 45 chr2 118839330 118841632 -131846222 - L1 LINE L1 -1092 5756 3461 465 176 33 0 chr2 118841632 118841723 -131846131 + AluSg/x SINE Alu 203 296 -16 9106 198 47 45 chr2 118841723 118844302 -131843552 - L1 LINE L1 -3387 3461 692 787 199 12 0 chr2 118844283 118844449 -131843405 - L1 LINE L1 -6681 168 1 * 262 255 99 50 chr2 118845145 118845286 -131842568 - MIR SINE MIR -46 216 69 371 236 0 19 chr2 118846102 118846208 -131841646 - MLT1J2 LTR MaLR -2 448 345 1646 158 80 45 chr2 118847397 118847773 -131840081 - MLT1B LTR MaLR 0 390 1 889 282 0 36 chr2 118848126 118848378 -131839476 + MIR SINE MIR 20 262 0 340 225 135 10 chr2 118848497 118848665 -131839189 - MIR SINE MIR -57 205 18 415 304 16 0 chr2 118849038 118849163 -131838691 - MER58A DNA MER1_type 0 150 24 854 222 54 5 chr2 118849914 118850117 -131837737 - MER20 DNA MER1_type -3 216 4 361 240 10 0 chr2 118850710 118850814 -131837040 - LTR33A LTR ERVL -5 518 414 353 280 9 19 chr2 118850950 118851057 -131836797 + MLT1D LTR MaLR 109 214 -335 1526 304 14 12 chr2 118851074 118851636 -131836218 + L1MCb LINE L1 1 563 -5482 1567 238 23 59 chr2 118851698 118852345 -131835509 + L1MCb LINE L1 554 1177 -4868 1308 219 97 4 chr2 118852527 118852979 -131834875 + L1MCb LINE L1 1060 1553 -5011 4546 181 48 4 chr2 118853029 118854308 -131833546 + L1PA16 LINE L1 4844 6158 -8 922 239 69 27 chr2 118854315 118854924 -131832930 + L1MCb LINE L1 1769 2422 -4323 1176 204 82 35 chr2 118855047 118855366 -131832488 + MER44D DNA MER2_type 1 604 -5 459 286 123 75 chr2 118855380 118855971 -131831883 + L2 LINE L2 2639 3312 -1 908 222 14 5 chr2 118856065 118856272 -131831582 + MER58A DNA MER1_type 1 209 -15 235 113 132 0 chr2 118856405 118856458 -131831396 - MER89 LTR ERV1 -499 60 1 486 314 35 12 chr2 118857751 118857923 -131829931 + MIR3 SINE MIR 19 194 -14 499 421 97 45 chr2 118858350 118858835 -131829019 - L2 LINE L2 0 3313 2804 599 285 72 9 chr2 118858996 118859217 -131828637 - MIR SINE MIR 0 262 28 239 259 93 19 chr2 118859279 118859387 -131828467 + L2 LINE L2 3194 3309 -4 2238 108 3 25 chr2 118860637 118860952 -131826902 + AluSx SINE Alu 1 308 -4 270 0 0 0 chr2 118862674 118862704 -131825150 + (TTTC)n Simple_repeat Simple_repeat 1 30 0 910 88 4 51 chr2 118862705 118862978 -131824876 + (TTCC)n Simple_repeat Simple_repeat 1 260 0 254 346 28 0 chr2 118864101 118864208 -131823646 + MIR SINE MIR 74 183 -79 23 0 0 0 chr2 118865931 118865954 -131821900 + AT_rich Low_complexity Low_complexity 1 23 0 265 272 76 22 chr2 118866247 118866339 -131821515 - MIR SINE MIR -119 143 47 352 207 49 0 chr2 118866570 118866652 -131821202 - L1MC4 LINE L1 -1337 6705 6620 355 350 14 35 chr2 118867671 118867814 -131820040 - L2 LINE L2 0 3272 3133 7924 190 22 11 chr2 118869189 118871081 -131816773 - L1P5 LINE L1 -555 5596 3677 207 0 0 0 chr2 118871081 118871104 -131816750 + (TTG)n Simple_repeat Simple_repeat 2 24 0 7924 190 22 11 chr2 118871104 118871374 -131816480 - L1P5 LINE L1 -2474 3677 3412 3546 94 25 2 chr2 118871378 118871899 -131815955 + L1PB1 LINE L1 5619 6151 0 24 0 0 0 chr2 118871899 118871923 -131815931 + AT_rich Low_complexity Low_complexity 1 24 0 693 307 9 14 chr2 118872579 118872794 -131815060 - MIR SINE MIR -18 244 31 221 287 93 16 chr2 118873574 118873703 -131814151 + MIR3 SINE MIR 3 141 -67 1685 138 99 42 chr2 118874585 118874940 -131812914 - THE1C LTR MaLR 0 375 1 1984 211 45 32 chr2 118874990 118875483 -131812371 - MLT1D LTR MaLR -6 499 1 224 293 0 17 chr2 118875765 118875823 -131812031 + MIR3 SINE MIR 144 200 -8 1144 280 33 17 chr2 118876171 118876532 -131811322 + MLT1E2 LTR MaLR 260 626 0 594 327 93 30 chr2 118876539 118877012 -131810842 - L2 LINE L2 -94 3219 2723 1029 218 4 0 chr2 118877018 118877252 -131810602 + L1MD3 LINE L1 7751 7985 -10 345 348 160 28 chr2 118877261 118877692 -131810162 - L2 LINE L2 -583 2731 2244 230 205 12 0 chr2 118878119 118878202 -131809652 + (TA)n Simple_repeat Simple_repeat 1 84 0 565 330 58 49 chr2 118880439 118880891 -131806963 - L1MC4a LINE L1 -1732 6076 5621 244 297 105 37 chr2 118880894 118881217 -131806637 - L1MC4a LINE L1 -2138 5670 5326 522 291 85 64 chr2 118881401 118881916 -131805938 - L1MC4a LINE L1 -1440 4706 4181 354 195 0 0 chr2 118881990 118882067 -131805787 + (TA)n Simple_repeat Simple_repeat 1 77 0 383 212 41 54 chr2 118882179 118882381 -131805473 - L1MC4a LINE L1 -2255 3891 3692 244 405 68 0 chr2 118882946 118883094 -131804760 - MIR3 SINE MIR -11 197 40 310 280 53 47 chr2 118885895 118886045 -131801809 + MIR SINE MIR 33 183 -79 956 324 90 24 chr2 118886119 118886862 -131800992 - L2 LINE L2 -1 3312 2518 1074 286 164 16 chr2 118887180 118887742 -131800112 - L2 LINE L2 -1903 1411 767 248 155 0 35 chr2 118888073 118888131 -131799723 + CT-rich Low_complexity Low_complexity 2 57 0 237 224 60 0 chr2 118888154 118888221 -131799633 + (TAAA)n Simple_repeat Simple_repeat 2 72 0 893 228 0 51 chr2 118888487 118888702 -131799152 + AluJo SINE Alu 86 289 -23 676 308 75 40 chr2 118888706 118889183 -131798671 - MARNA DNA Mariner -19 567 74 507 222 34 17 chr2 118890392 118890509 -131797345 - MIR SINE MIR -121 141 23 300 413 65 0 chr2 118890729 118890884 -131796970 + L2 LINE L2 3108 3272 0 326 244 22 11 chr2 118891075 118891165 -131796689 + L1MC4 LINE L1 6613 6703 -1339 181 167 37 0 chr2 118891178 118891232 -131796622 + (TA)n Simple_repeat Simple_repeat 1 56 0 2130 102 57 28 chr2 118891241 118891593 -131796261 - THE1B LTR MaLR -2 362 1 508 62 25 0 chr2 118891613 118891694 -131796160 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 5511 134 28 19 chr2 118891741 118892595 -131795259 + L1PB2 LINE L1 4840 5707 -444 309 68 0 0 chr2 118892595 118892639 -131795215 + (CA)n Simple_repeat Simple_repeat 2 45 0 5511 134 28 19 chr2 118892639 118893087 -131794767 + L1PB2 LINE L1 5707 6149 -2 189 0 0 0 chr2 118893091 118893112 -131794742 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 2080 113 10 13 chr2 118893118 118893420 -131794434 - AluSq SINE Alu -12 301 1 1307 122 18 18 chr2 118893447 118893669 -131794185 - L1PA13 LINE L1 0 6163 5942 791 257 11 0 chr2 118894675 118894862 -131792992 + MER5A DNA MER1_type 1 189 0 288 0 0 0 chr2 118894984 118895016 -131792838 + (TTG)n Simple_repeat Simple_repeat 3 34 0 180 219 0 0 chr2 118897656 118897697 -131790157 - MIR3 SINE MIR -1 207 167 346 305 76 57 chr2 118897732 118897942 -131789912 + MIR SINE MIR 36 249 -13 2145 135 14 0 chr2 118898657 118898954 -131788900 + AluSg SINE Alu 1 301 -9 1662 163 68 39 chr2 118899252 118899511 -131788343 - MER7A DNA MER2_type -2692 346 75 2445 66 0 0 chr2 118899511 118899812 -131788042 - AluY SINE Alu -10 301 1 1662 163 68 39 chr2 118899812 118899889 -131787965 - MER7A DNA MER2_type -2963 75 2 237 282 30 61 chr2 118900426 118900557 -131787297 - LTR67 LTR ERVL -16 541 415 190 286 77 11 chr2 118900977 118901068 -131786786 - MIR SINE MIR -62 200 104 783 210 32 0 chr2 118901227 118901384 -131786470 - MER5A DNA MER1_type -6 183 22 29 78 0 0 chr2 118901601 118901665 -131786189 + AT_rich Low_complexity Low_complexity 1 64 0 673 293 64 66 chr2 118902279 118902763 -131785091 - LTR16C LTR ERVL -8 483 1 528 282 17 39 chr2 118902803 118902984 -131784870 + LTR41 LTR ERVL 14 190 -583 410 251 0 96 chr2 118903253 118903492 -131784362 + LTR41 LTR ERVL 552 767 -6 367 274 144 0 chr2 118903773 118903926 -131783928 - LTR16B LTR ERVL -23 441 267 1386 288 88 4 chr2 118904000 118904543 -131783311 + L2 LINE L2 2727 3310 -3 1103 326 194 12 chr2 118904559 118905464 -131782390 - L2 LINE L2 -471 2843 1774 378 294 20 14 chr2 118905485 118905631 -131782223 + L1MDa LINE L1 35 181 -6359 1300 206 18 0 chr2 118905633 118905909 -131781945 + L1ME LINE L1 5322 5602 -564 297 0 0 0 chr2 118906266 118906299 -131781555 + (CA)n Simple_repeat Simple_repeat 2 34 0 697 239 132 0 chr2 118907234 118907401 -131780453 + MER5A DNA MER1_type 1 189 0 1009 299 89 59 chr2 118907407 118907966 -131779888 + MER115 DNA AcHobo 59 634 -59 486 214 34 8 chr2 118907971 118908088 -131779766 - MER93b LTR ERV1 -2 371 252 23215 42 52 3 chr2 118908089 118911214 -131776640 + L1PA2 LINE L1 2 3280 -2866 13522 38 5 0 chr2 118911662 118913391 -131774463 + L1PA2 LINE L1 3395 5132 -1014 6044 26 1 0 chr2 118913364 118914107 -131773747 + L1PA2 LINE L1 5412 6155 0 * 36 53 0 13 chr2 118914107 118914125 -131773729 + AT_rich Low_complexity Low_complexity 1 18 -56 4040 150 9 7 chr2 118914125 118914806 -131773048 + L1PA16 LINE L1 5475 6156 -10 36 53 0 13 chr2 118914806 118914862 -131772992 + AT_rich Low_complexity Low_complexity 18 74 0 631 294 25 10 chr2 118914862 118915063 -131772791 - MER93a LTR ERV1 -108 294 91 190 305 116 129 chr2 118915274 118915507 -131772347 + L2 LINE L2 3007 3236 -36 326 219 49 12 chr2 118915633 118915715 -131772139 - MIR SINE MIR -59 203 119 1994 163 65 38 chr2 118915723 118916122 -131771732 + MSTA LTR MaLR 19 428 0 8918 168 38 4 chr2 118916124 118917720 -131770134 + MSTA-int LTR MaLR 3 1651 0 2058 175 75 8 chr2 118917722 118918121 -131769733 + MSTA LTR MaLR 3 428 0 10659 192 15 50 chr2 118918348 118920709 -131767145 - L1M3c LINE L1 -4799 2299 2 381 335 24 29 chr2 118921144 118921314 -131766540 + MIR SINE MIR 12 180 -82 231 381 34 25 chr2 118921330 118921448 -131766406 - L2 LINE L2 0 3272 3154 322 336 36 64 chr2 118921941 118922175 -131765679 - MIR SINE MIR -1 261 34 478 301 52 0 chr2 118922228 118922381 -131765473 + MIR SINE MIR 102 262 0 1810 191 52 0 chr2 118923935 118924318 -131763536 + MER57A LTR ERV1 1 403 0 496 247 126 31 chr2 118926654 118926909 -131760945 - MER114 LTR ERV 0 648 370 600 256 71 8 chr2 118926940 118927194 -131760660 - MER114 LTR ERV -378 270 1 642 168 44 0 chr2 118927203 118927316 -131760538 + Tigger3(Golem) DNA MER2_type 2893 3010 -19 1809 171 0 13 chr2 118927473 118927778 -131760076 + AluJb SINE Alu 1 301 -11 32 26 0 0 chr2 118927905 118927944 -131759910 + AT_rich Low_complexity Low_complexity 1 39 0 309 357 54 42 chr2 118927944 118928280 -131759574 - L1ME3A LINE L1 -164 6002 5663 507 321 70 19 chr2 118928291 118929287 -131758567 - L1ME3A LINE L1 -540 5638 4574 1668 158 63 28 chr2 118929287 118929649 -131758205 + THE1C LTR MaLR 1 375 0 507 321 70 19 chr2 118929649 118929745 -131758109 - L1ME3A LINE L1 -1604 4574 4484 225 292 91 34 chr2 118929984 118930248 -131757606 - L1ME3A LINE L1 -1950 4196 3918 4228 26 6 0 chr2 118931362 118931862 -131755992 + L1PA3 LINE L1 5652 6154 -1 2471 126 69 10 chr2 118932380 118932784 -131755070 + MSTA LTR MaLR 1 428 0 600 93 0 21 chr2 118932784 118932881 -131754973 + MSTA-int LTR MaLR 1 95 -1556 3178 150 19 30 chr2 118932883 118933518 -131754336 + L1MA7 LINE L1 5655 6282 -9 194 265 0 84 chr2 118933603 118933686 -131754168 - L2 LINE L2 -301 2971 2896 192 256 0 90 chr2 118934285 118934363 -131753491 - L2 LINE L2 -645 2669 2599 217 226 0 38 chr2 118934363 118934416 -131753438 + GA-rich Low_complexity Low_complexity 1 51 0 180 0 0 0 chr2 118934625 118934645 -131753209 + (A)n Simple_repeat Simple_repeat 1 20 0 215 211 0 0 chr2 118935280 118935318 -131752536 + (CA)n Simple_repeat Simple_repeat 1 38 0 225 295 82 0 chr2 118935392 118935453 -131752401 + L2 LINE L2 3245 3310 -3 215 239 33 7 chr2 118937012 118937086 -131750768 + MIR SINE MIR 38 115 -93 3516 124 21 79 chr2 118937391 118937667 -131750187 + L1MA7 LINE L1 5589 5879 -412 2250 99 3 37 chr2 118937667 118937989 -131749865 - AluY SINE Alu 0 311 1 3516 124 21 79 chr2 118937989 118938455 -131749399 + L1MA7 LINE L1 5879 6288 -3 452 281 202 6 chr2 118940027 118940205 -131747649 - MIR SINE MIR -16 246 34 377 246 178 34 chr2 118941087 118941351 -131746503 - L2 LINE L2 -1 3312 3011 222 277 68 0 chr2 118942664 118942775 -131745079 + MIR SINE MIR 40 162 -46 1968 94 0 4 chr2 118942824 118943079 -131744775 - AluSx SINE Alu -58 254 1 304 303 162 5 chr2 118943489 118943674 -131744180 + HAL1 LINE L1 1074 1287 -1220 22 0 0 0 chr2 118944906 118944928 -131742926 + AT_rich Low_complexity Low_complexity 1 22 0 1127 179 42 134 chr2 118945409 118945818 -131742036 - MLT1A2 LTR MaLR -1 373 3 182 361 65 46 chr2 118946231 118946491 -131741363 - L2 LINE L2 0 3272 3008 249 285 108 8 chr2 118946772 118946902 -131740952 + L1MEd LINE L1 93 235 -5970 273 343 42 10 chr2 118947102 118947391 -131740463 + L1MEd LINE L1 682 979 -5226 1108 190 79 0 chr2 118947393 118947609 -131740245 + MER46A DNA MER2_type 4 236 0 305 207 128 11 chr2 118947912 118948086 -131739768 + L1MEd LINE L1 1362 1620 -956 234 0 0 0 chr2 118948093 118948119 -131739735 + (A)n Simple_repeat Simple_repeat 1 26 0 494 288 27 18 chr2 118948133 118948463 -131739391 - L1PA12 LINE L1 -22 6146 5814 3579 107 7 35 chr2 118948687 118949285 -131738569 - L1PA12 LINE L1 -131 6037 5457 * 4355 96 1 0 chr2 118949277 118949923 -131737931 - L1PA12 LINE L1 -3071 3075 2429 564 158 0 0 chr2 118949921 118950022 -131737832 + L1P LINE L1 1946 2046 -4100 * 4127 79 5 9 chr2 118950020 118950651 -131737203 + L1PA7 LINE L1 4747 5374 -772 3788 34 4 0 chr2 118950643 118951120 -131736734 - L1P LINE L1 -1586 4560 4082 * 7124 40 4 30 chr2 118951120 118952211 -131735643 + L1PA5 LINE L1 5078 6146 -8 6140 76 0 0 chr2 118952222 118953025 -131734829 + L1PA7 LINE L1 5352 6154 0 1568 90 0 4 chr2 118953115 118953461 -131734393 - L1P4 LINE L1 -687 5476 5134 * 11169 212 49 3 chr2 118953453 118956692 -131731162 - L1PA13 LINE L1 -3387 3410 1 180 217 0 0 chr2 118957825 118957871 -131729983 + (TG)n Simple_repeat Simple_repeat 2 47 0 2339 110 65 11 chr2 118957915 118958271 -131729583 - THE1C LTR MaLR 0 375 1 8907 114 52 49 chr2 118958276 118959845 -131728009 - THE1C-int LTR MaLR -6 1574 1 1276 104 62 14 chr2 118959845 118960056 -131727798 - THE1C LTR MaLR -2 373 153 * 1492 108 4 17 chr2 118960054 118960285 -131727569 - THE1C LTR MaLR -147 228 1 2518 260 42 41 chr2 118960901 118962076 -131725778 + L1MA7 LINE L1 830 1797 -4516 3596 243 19 16 chr2 118962092 118963115 -131724739 + L1MA7 LINE L1 2352 3377 -3005 33029 90 8 90 chr2 118963122 118968584 -131719270 + L1P LINE L1 11 5025 -1121 938 19 0 0 chr2 118968584 118968688 -131719166 + L1PA6 LINE L1 6050 6153 -1 33029 90 8 90 chr2 118968688 118968699 -131719155 + L1P LINE L1 5025 5035 -1111 9291 189 39 23 chr2 118968694 118970144 -131717710 + L1MA7 LINE L1 3354 4862 -1595 * 1531 134 166 4 chr2 118970144 118970397 -131717457 + AluSx SINE Alu 5 298 -4 9291 189 39 23 chr2 118970397 118971265 -131716589 + L1MA7 LINE L1 4862 5714 -743 1378 150 136 0 chr2 118971246 118971526 -131716328 + L1MA7 LINE L1 6201 6518 -9 * 22 0 0 0 chr2 118971557 118971579 -131716275 + AT_rich Low_complexity Low_complexity 1 22 0 220 321 12 12 chr2 118971826 118971910 -131715944 + MIR SINE MIR 133 216 -46 203 379 0 10 chr2 118972951 118973054 -131714800 - MIR SINE MIR -147 115 14 227 308 210 20 chr2 118973076 118973271 -131714583 + L2 LINE L2 293 524 -2790 23 0 0 0 chr2 118973292 118973315 -131714539 + AT_rich Low_complexity Low_complexity 1 23 0 16055 138 35 9 chr2 118973322 118981655 -131706199 - L1PB1 LINE L1 0 6867 1 422 351 64 55 chr2 118982246 118982921 -131704933 + L2 LINE L2 1137 1817 -1497 486 304 119 35 chr2 118983053 118983610 -131704244 - L2 LINE L2 0 3313 2452 7536 52 1 19 chr2 118984056 118985137 -131702717 + L1PA6 LINE L1 5088 6152 -2 1074 284 258 25 chr2 118985154 118985971 -131701883 - L2 LINE L2 -892 2422 1415 1042 285 131 50 chr2 118985971 118986839 -131701015 + L2 LINE L2 2001 2939 -375 320 244 42 76 chr2 118986945 118987064 -131700790 + L2 LINE L2 3199 3313 0 418 353 24 18 chr2 118987269 118987436 -131700418 + MIR3 SINE MIR 6 173 -35 318 256 32 109 chr2 118988788 118988944 -131698910 - L2 LINE L2 -47 3266 3123 339 295 11 11 chr2 118989196 118989291 -131698563 + MIR3 SINE MIR 104 198 -10 205 286 0 0 chr2 118989865 118989914 -131697940 + MIR SINE MIR 102 150 -112 220 271 121 29 chr2 118990868 118991008 -131696846 + L2 LINE L2 2932 3084 -188 447 280 70 55 chr2 118991273 118991785 -131696069 - MLT1G1 LTR MaLR -12 583 1 454 263 52 43 chr2 118992567 118992746 -131695108 + MIR SINE MIR 4 180 -55 1855 142 0 55 chr2 118992756 118993065 -131694789 - AluJb SINE Alu -19 293 2 202 353 39 20 chr2 118993386 118993488 -131694366 + MIR SINE MIR 48 151 -111 1587 168 6 53 chr2 118993525 118993847 -131694007 + AluJo SINE Alu 2 308 -4 827 90 66 0 chr2 118993861 118994027 -131693827 + GA-rich Low_complexity Low_complexity 4 180 0 309 118 0 0 chr2 118994028 118994079 -131693775 + (GGGA)n Simple_repeat Simple_repeat 4 54 0 1313 71 11 11 chr2 118994187 118994455 -131693399 + (GAAA)n Simple_repeat Simple_repeat 2 269 0 230 179 18 0 chr2 118994671 118994727 -131693127 + (CA)n Simple_repeat Simple_repeat 2 58 0 383 332 25 19 chr2 118994926 118995099 -131692755 + MER5A DNA MER1_type 5 188 -1 2529 49 7 3 chr2 118995102 118995408 -131692446 + AluY SINE Alu 1 307 -4 254 273 125 29 chr2 118995410 118995590 -131692264 - MIR3 SINE MIR -65 143 10 * 304 344 57 0 chr2 118995524 118995646 -131692208 + MIR SINE MIR 13 141 -121 191 171 0 0 chr2 118997054 118997089 -131690765 - MIR SINE MIR -12 250 216 705 224 100 12 chr2 118997359 118997529 -131690325 - MER5A DNA MER1_type -4 185 1 222 254 218 67 chr2 118998109 118998302 -131689552 + MIR SINE MIR 26 247 -15 363 254 0 0 chr2 118998799 118998964 -131688890 + (CA)n Simple_repeat Simple_repeat 2 166 0 1555 246 51 2 chr2 118999251 118999662 -131688192 - LTR16A LTR ERVL -2 448 18 370 284 111 24 chr2 118999973 119000203 -131687651 - MIR3 SINE MIR 0 262 13 932 247 71 0 chr2 119000446 119000685 -131687169 + MIR SINE MIR 1 256 -6 1486 269 124 29 chr2 119000741 119001466 -131686388 - L2 LINE L2 -1079 2235 1442 196 256 93 23 chr2 119001497 119001583 -131686271 - MIR SINE MIR -108 154 63 218 32 32 0 chr2 119001689 119001720 -131686134 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 514 258 97 7 chr2 119002928 119003083 -131684771 + MIR SINE MIR 57 225 -37 760 263 31 22 chr2 119004044 119004272 -131683582 + MIR SINE MIR 33 262 0 226 381 70 49 chr2 119004661 119005049 -131682805 + L2 LINE L2 2845 3240 -32 1697 161 7 7 chr2 119006806 119007079 -131680775 + AluJo SINE Alu 10 282 -30 892 118 0 13 chr2 119007082 119007234 -131680620 + (GAAA)n Simple_repeat Simple_repeat 2 151 0 42931 39 22 2 chr2 119007544 119013569 -131674285 + L1PA3 LINE L1 3 6155 0 1522 303 93 23 chr2 119013758 119014508 -131673346 - L2 LINE L2 -385 2929 2127 443 256 191 18 chr2 119014644 119014812 -131673042 + MIR SINE MIR 7 203 -59 192 360 45 0 chr2 119015593 119015704 -131672150 + L2 LINE L2 2925 3040 -232 345 256 131 30 chr2 119016032 119016200 -131671654 + L1ME4a LINE L1 5937 6121 0 290 335 110 7 chr2 119016288 119016443 -131671411 + MIR SINE MIR 75 245 -17 282 362 61 31 chr2 119016785 119016948 -131670906 + MIR SINE MIR 21 188 -74 242 253 155 75 chr2 119017028 119017202 -131670652 - MER102a DNA MER1_type -26 304 117 588 115 29 144 chr2 119020253 119020322 -131667532 + MLT1B LTR MaLR 268 343 -47 462 18 0 0 chr2 119020322 119020377 -131667477 + (GA)n Simple_repeat Simple_repeat 2 56 0 2101 93 0 4 chr2 119020377 119020656 -131667198 - AluSx SINE Alu -34 278 1 588 115 29 144 chr2 119020656 119020724 -131667130 + MLT1B LTR MaLR 341 390 0 1726 208 14 14 chr2 119020725 119021085 -131666769 + L1ME3A LINE L1 4519 4878 -1268 2012 210 63 9 chr2 119021085 119021546 -131666308 + L1ME3A LINE L1 5674 6159 -11 1006 144 0 0 chr2 119021746 119021906 -131665948 + AluSg/x SINE Alu 140 299 -13 286 51 103 0 chr2 119021908 119021947 -131665907 - MSTC LTR MaLR -385 43 1 1915 112 39 0 chr2 119022087 119022373 -131665481 + AluSx SINE Alu 1 297 -15 1973 119 3 31 chr2 119022375 119022695 -131665159 + AluSx SINE Alu 1 311 -1 1170 106 0 0 chr2 119023947 119024108 -131663746 - AluSp SINE Alu -19 294 134 397 264 182 54 chr2 119024272 119024750 -131663104 - LTR67 LTR ERVL -7 550 12 1369 151 95 0 chr2 119025335 119025587 -131662267 - L1MCa LINE L1 -6105 321 46 206 338 93 29 chr2 119025645 119025784 -131662070 - MIR SINE MIR -12 250 103 209 330 196 12 chr2 119026724 119026897 -131660957 - MIR SINE MIR -4 258 54 646 160 0 42 chr2 119026910 119027029 -131660825 + L1MA4 LINE L1 3924 4037 -2109 3649 146 27 5 chr2 119027029 119027678 -131660176 + L1MA4 LINE L1 5629 6300 0 511 261 142 0 chr2 119028016 119028227 -131659627 - L1ME LINE L1 -343 5778 5538 582 267 13 7 chr2 119029296 119029446 -131658408 - MIR SINE MIR -4 258 108 429 294 17 0 chr2 119030505 119030624 -131657230 + MIR3 SINE MIR 61 181 -27 430 286 19 0 chr2 119033313 119033418 -131654436 - MER5B DNA MER1_type -60 118 12 2156 111 3 0 chr2 119033744 119034051 -131653803 - AluSx SINE Alu -4 308 1 1317 239 100 0 chr2 119034170 119034501 -131653353 + MLT1A1 LTR MaLR 1 364 -1 244 83 0 0 chr2 119034701 119034749 -131653105 - LTR66 LTR ERVL -169 441 394 303 225 141 0 chr2 119034749 119034820 -131653034 - L1MC4 LINE L1 -1347 6695 6615 228 300 0 0 chr2 119034823 119034913 -131652941 + L1MC4 LINE L1 6614 6703 -1339 325 344 0 0 chr2 119034913 119035003 -131652851 + L1MC4 LINE L1 6614 6703 -1339 307 356 0 0 chr2 119034923 119035013 -131652841 - L1MC4 LINE L1 -1339 6703 6614 * 201 290 0 0 chr2 119035013 119035082 -131652772 + (CATATA)n Simple_repeat Simple_repeat 6 74 0 238 239 22 43 chr2 119035085 119035177 -131652677 - L1MC4 LINE L1 -1339 6703 6614 * 252 287 23 0 chr2 119035107 119035194 -131652660 + L1MC4 LINE L1 6614 6702 -1340 249 322 0 0 chr2 119035231 119035321 -131652533 + L1MC4 LINE L1 6614 6703 -1339 258 258 0 43 chr2 119035325 119035418 -131652436 - L1MC4 LINE L1 -1339 6703 6615 212 210 0 32 chr2 119035418 119035480 -131652374 + (CATATA)n Simple_repeat Simple_repeat 1 60 0 233 307 23 0 chr2 119035485 119035573 -131652281 - L1MC4 LINE L1 -1339 6703 6614 274 297 138 14 chr2 119035819 119035964 -131651890 + MIR3 SINE MIR 32 194 -14 273 278 205 26 chr2 119036333 119036484 -131651370 + L2 LINE L2 2245 2422 -892 1422 205 92 55 chr2 119036523 119036903 -131650951 + MSTD LTR MaLR 1 394 -2 335 306 74 8 chr2 119036969 119037090 -131650764 + MIR SINE MIR 25 153 -109 1843 60 0 13 chr2 119037234 119037468 -131650386 - AluY SINE Alu -80 231 1 400 217 58 67 chr2 119037473 119037593 -131650261 + MIR SINE MIR 143 261 -1 194 368 35 0 chr2 119038244 119038331 -131649523 - MIR SINE MIR -119 143 54 490 203 78 0 chr2 119038347 119038500 -131649354 - Charlie5 DNA MER1_type 0 2624 2460 180 260 73 83 chr2 119038864 119038960 -131648894 + L3b LINE CR1 1168 1262 -321 1852 122 34 7 chr2 119039077 119039372 -131648482 - AluSx SINE Alu -3 309 7 691 139 62 62 chr2 119039725 119039869 -131647985 + L2 LINE L2 3170 3313 0 540 208 35 81 chr2 119040815 119040988 -131646866 + MER104 DNA Tc2 13 177 -3 910 111 0 15 chr2 119041175 119041310 -131646544 - MLT1A1 LTR MaLR -231 134 2 247 289 82 0 chr2 119041311 119041408 -131646446 - L2 LINE L2 -241 3031 2927 260 292 56 0 chr2 119042003 119042075 -131645779 - L2 LINE L2 -9 3263 3188 521 271 32 60 chr2 119042570 119042788 -131645066 - MIR SINE MIR 0 262 51 338 292 132 0 chr2 119042804 119042948 -131644906 + MIR SINE MIR 100 262 0 226 232 0 18 chr2 119042979 119043035 -131644819 - MIR3 SINE MIR -45 163 109 2319 81 3 0 chr2 119044149 119044447 -131643407 - AluSp SINE Alu -2 311 13 1687 116 4 23 chr2 119045086 119045345 -131642509 + AluSx SINE Alu 36 289 -23 21 36 0 0 chr2 119045481 119045509 -131642345 + AT_rich Low_complexity Low_complexity 1 28 0 244 228 13 13 chr2 119045674 119045753 -131642101 + GA-rich Low_complexity Low_complexity 4 82 0 1336 292 167 27 chr2 119045881 119046580 -131641274 + L3 LINE CR1 117 913 -664 1489 137 67 16 chr2 119046677 119046932 -131640922 - AluJo SINE Alu -16 296 29 2115 82 36 0 chr2 119050554 119050835 -131637019 - AluSg SINE Alu -19 291 1 1320 183 4 57 chr2 119051797 119052076 -131635778 - AluSx SINE Alu -48 264 1 777 287 40 17 chr2 119052077 119052373 -131635481 - L1ME LINE L1 -341 5780 5478 860 272 32 0 chr2 119052624 119052841 -131635013 - MER58A DNA MER1_type 0 224 1 797 125 100 0 chr2 119052963 119053083 -131634771 - FLAM_C SINE Alu -1 132 1 484 306 78 57 chr2 119053393 119053638 -131634216 - MIR SINE MIR -1 261 12 776 236 122 63 chr2 119053651 119054017 -131633837 + MLT1J LTR MaLR 1 458 -53 1011 202 0 14 chr2 119054718 119054936 -131632918 - AluJo SINE Alu -11 301 87 638 184 84 0 chr2 119055869 119056004 -131631850 + MER20B DNA MER1_type 52 202 -17 566 276 155 0 chr2 119056556 119056769 -131631085 + MIR SINE MIR 5 250 -12 234 0 0 0 chr2 119056846 119056872 -131630982 + (ATG)n Simple_repeat Simple_repeat 3 28 0 189 0 0 0 chr2 119056933 119056954 -131630900 + (GGA)n Simple_repeat Simple_repeat 2 22 0 243 0 0 0 chr2 119057002 119057029 -131630825 + (GGA)n Simple_repeat Simple_repeat 2 28 0 234 0 0 0 chr2 119057065 119057091 -131630763 + (ATG)n Simple_repeat Simple_repeat 3 28 0 207 0 0 0 chr2 119057132 119057155 -131630699 + (ATG)n Simple_repeat Simple_repeat 3 25 0 252 77 0 0 chr2 119057197 119057236 -131630618 + (ATG)n Simple_repeat Simple_repeat 1 39 0 216 0 0 0 chr2 119057290 119057314 -131630540 + (GGA)n Simple_repeat Simple_repeat 2 25 0 243 0 0 0 chr2 119057362 119057389 -131630465 + (GGA)n Simple_repeat Simple_repeat 2 28 0 216 0 0 0 chr2 119057562 119057586 -131630268 + (GGA)n Simple_repeat Simple_repeat 2 25 0 180 0 0 0 chr2 119057622 119057642 -131630212 + (ATG)n Simple_repeat Simple_repeat 3 22 0 * 282 56 0 0 chr2 119057640 119057676 -131630178 + (GGA)n Simple_repeat Simple_repeat 2 37 0 360 0 0 0 chr2 119057710 119057750 -131630104 + (ATG)n Simple_repeat Simple_repeat 1 40 0 216 0 0 0 chr2 119057804 119057828 -131630026 + (GGA)n Simple_repeat Simple_repeat 2 25 0 315 0 0 0 chr2 119057933 119057968 -131629886 + (ATG)n Simple_repeat Simple_repeat 3 37 0 198 0 0 0 chr2 119058067 119058089 -131629765 + (ATG)n Simple_repeat Simple_repeat 1 22 0 359 169 42 0 chr2 119058845 119058916 -131628938 + MLT1D LTR MaLR 421 494 -11 227 270 0 40 chr2 119058973 119059047 -131628807 + Charlie8 DNA MER1_type 1358 1428 -989 268 313 48 0 chr2 119059103 119059186 -131628668 - L2 LINE L2 0 3313 3227 431 228 33 0 chr2 119059546 119059638 -131628216 - MER112 DNA MER1_type -4 256 162 6831 86 2 7 chr2 119059650 119060569 -131627285 + L1PA10 LINE L1 5254 6168 0 231 259 82 0 chr2 119060574 119060659 -131627195 - MER112 DNA MER1_type -82 178 87 204 40 0 0 chr2 119060668 119060693 -131627161 + (TG)n Simple_repeat Simple_repeat 2 26 0 334 342 45 0 chr2 119060932 119061043 -131626811 + MER91A DNA MER1_type 1 116 -80 259 273 91 0 chr2 119061068 119061156 -131626698 + MER91A DNA MER1_type 90 185 -11 2064 121 0 10 chr2 119061253 119061560 -131626294 - AluSq SINE Alu -9 304 1 2639 120 56 162 chr2 119062815 119064149 -131623705 + L1MA4 LINE L1 5108 6296 -4 2046 119 16 32 chr2 119064431 119064742 -131623112 - AluSx SINE Alu -6 306 1 476 242 61 76 chr2 119064835 119064936 -131622918 - MIR SINE MIR -8 254 156 2909 167 9 11 chr2 119064936 119065402 -131622452 + MLT1C LTR MaLR 3 467 0 476 242 61 76 chr2 119065402 119065498 -131622356 - MIR SINE MIR -106 156 60 1105 231 99 60 chr2 119066371 119066856 -131620998 + MLT1J LTR MaLR 1 504 -7 232 279 205 8 chr2 119066905 119067027 -131620827 - MIR SINE MIR -110 152 7 338 250 29 37 chr2 119067978 119068114 -131619740 - MER117 DNA MER1_type -31 166 32 1839 172 3 7 chr2 119068139 119068441 -131619413 + AluJb SINE Alu 1 301 -11 480 35 0 0 chr2 119068442 119068500 -131619354 + (GGAA)n Simple_repeat Simple_repeat 2 59 0 211 425 43 0 chr2 119068517 119068611 -131619243 + L2 LINE L2 3161 3258 -14 6088 161 39 12 chr2 119068818 119070032 -131617822 - L1MC1 LINE L1 0 6333 5079 2117 124 3 3 chr2 119070032 119070339 -131617515 + AluSx SINE Alu 1 307 -5 6088 161 39 12 chr2 119070339 119070497 -131617357 - L1MC1 LINE L1 -1254 5079 4927 335 331 42 12 chr2 119070519 119070685 -131617169 + MIR3 SINE MIR 9 179 -29 182 118 29 0 chr2 119070995 119071029 -131616825 + (TAA)n Simple_repeat Simple_repeat 1 35 0 424 325 108 10 chr2 119071045 119071239 -131616615 - MIR SINE MIR -43 219 7 585 204 174 0 chr2 119071932 119072064 -131615790 - MER5A DNA MER1_type -31 158 4 199 239 22 0 chr2 119072461 119072507 -131615347 + L2 LINE L2 3181 3227 -86 463 78 26 0 chr2 119072942 119073019 -131614835 + (TAGA)n Simple_repeat Simple_repeat 2 80 0 393 358 30 10 chr2 119073057 119073258 -131614596 - MIR SINE MIR 0 262 58 377 297 135 10 chr2 119073653 119073854 -131614000 - MIR SINE MIR -5 257 41 281 268 211 0 chr2 119074543 119074666 -131613188 + MIR SINE MIR 100 248 -14 207 194 97 48 chr2 119075127 119075189 -131612665 + MER91A DNA MER1_type 129 193 -3 214 211 39 0 chr2 119075291 119075343 -131612511 - L2 LINE L2 -86 3186 3133 257 311 15 15 chr2 119075465 119075597 -131612257 + GA-rich Low_complexity Low_complexity 2 133 0 318 87 0 0 chr2 119075619 119075665 -131612189 + (TG)n Simple_repeat Simple_repeat 1 46 0 346 294 78 0 chr2 119075702 119075804 -131612050 - MIR SINE MIR -28 234 125 317 272 18 61 chr2 119076890 119077004 -131610850 + L2 LINE L2 3205 3313 0 22 0 0 0 chr2 119077946 119077968 -131609886 + GC_rich Low_complexity Low_complexity 1 22 0 246 296 0 0 chr2 119078379 119078450 -131609404 + C-rich Low_complexity Low_complexity 1 71 0 1077 185 92 8 chr2 119079241 119079479 -131608375 - MIR SINE MIR -4 258 1 359 335 72 24 chr2 119079680 119079847 -131608007 - L2 LINE L2 -18 3254 3080 496 316 7 0 chr2 119079911 119080050 -131607804 + MARNA DNA Mariner 99 238 -348 528 277 27 20 chr2 119081677 119081825 -131606029 - MIR SINE MIR -86 176 28 214 263 12 25 chr2 119082126 119082206 -131605648 + (CATA)n Simple_repeat Simple_repeat 4 82 0 451 262 78 24 chr2 119082646 119082859 -131604995 + MIR SINE MIR 3 230 -32 379 332 173 9 chr2 119083001 119083221 -131604633 - L3 LINE CR1 -2 1575 1320 2100 127 0 0 chr2 119084617 119084927 -131602927 - AluSq SINE Alu 0 310 1 499 328 56 16 chr2 119084959 119085209 -131602645 - MIR SINE MIR 0 262 3 317 297 91 30 chr2 119085819 119085984 -131601870 + MER20B DNA MER1_type 2 176 -607 392 219 0 0 chr2 119086306 119086388 -131601466 - MIR SINE MIR -133 129 48 354 342 123 5 chr2 119087033 119087220 -131600634 + MIR SINE MIR 41 249 -13 258 138 17 35 chr2 119089265 119089323 -131598531 - L1ME4a LINE L1 -15 6106 6050 343 221 15 0 chr2 119089855 119089923 -131597931 - L3 LINE CR1 -84 1493 1425 2480 54 0 7 chr2 119090422 119090718 -131597136 - AluY SINE Alu -17 294 1 242 269 179 39 chr2 119091343 119091499 -131596355 + MIR SINE MIR 14 191 -71 311 232 42 42 chr2 119091707 119091802 -131596052 - L2 LINE L2 -67 3205 3111 275 301 58 68 chr2 119091839 119092045 -131595809 - L2 LINE L2 -103 3169 2966 928 317 103 47 chr2 119092363 119093255 -131594599 - L2 LINE L2 -813 2501 1560 540 231 32 75 chr2 119093465 119093651 -131594203 - MLT1L LTR MaLR -224 391 214 204 311 104 42 chr2 119093779 119093972 -131593882 - L2 LINE L2 -1834 1480 1276 1120 174 23 28 chr2 119094104 119094322 -131593532 - MER20 DNA MER1_type 0 219 3 236 225 150 0 chr2 119094382 119094462 -131593392 - MIR SINE MIR -151 111 20 189 107 0 0 chr2 119094682 119094710 -131593144 + (A)n Simple_repeat Simple_repeat 1 28 0 1853 138 16 44 chr2 119095493 119095812 -131592042 + AluSx SINE Alu 3 312 0 297 280 120 10 chr2 119096014 119096114 -131591740 - MIR SINE MIR -110 152 42 1436 256 28 28 chr2 119096119 119096518 -131591336 - L1ME3A LINE L1 -78 6092 5694 850 211 37 0 chr2 119096519 119096680 -131591174 - AluSg/x SINE Alu -10 302 136 894 218 144 26 chr2 119096711 119097158 -131590696 - L1ME3A LINE L1 -508 5654 5152 4860 172 22 27 chr2 119097172 119098104 -131589750 - L1MB1 LINE L1 -1 6403 5458 2206 137 30 35 chr2 119098106 119098472 -131589382 - THE1B LTR MaLR 0 364 1 12622 94 2 1 chr2 119098472 119100050 -131587804 - THE1B-int LTR MaLR 0 1580 1 355 25 0 0 chr2 119100050 119100090 -131587764 - THE1B LTR MaLR 0 355 316 2039 83 0 11 chr2 119100090 119100355 -131587499 + AluY SINE Alu 1 262 -49 703 71 0 0 chr2 119100355 119100440 -131587414 + AluY SINE Alu 217 301 -10 2120 138 31 15 chr2 119100440 119100766 -131587088 - THE1B LTR MaLR -31 333 3 13182 231 40 20 chr2 119100768 119101348 -131586506 - L1MB1 LINE L1 -921 5461 4894 2454 97 56 0 chr2 119101348 119101689 -131586165 - L1PA14 LINE L1 -2 6159 5800 13182 231 40 20 chr2 119101689 119102217 -131585637 - L1MB1 LINE L1 -1488 4894 4378 3055 148 86 37 chr2 119102217 119102444 -131585410 + LTR49 LTR ERV1 1 215 -380 1724 168 0 55 chr2 119102444 119102772 -131585082 + AluJo SINE Alu 3 312 0 3055 148 86 37 chr2 119102772 119103111 -131584743 + LTR49 LTR ERV1 215 595 0 13182 231 40 20 chr2 119103111 119106379 -131581475 - L1MB1 LINE L1 -2004 4378 976 1098 254 131 11 chr2 119106370 119106890 -131580964 - L1M4 LINE L1 -988 5158 4577 * 1339 292 49 60 chr2 119106986 119108237 -131579617 - L1MEc LINE L1 -4451 1945 709 411 257 28 35 chr2 119108969 119109113 -131578741 - L1MEc LINE L1 -5924 281 139 189 319 0 0 chr2 119109123 119109170 -131578684 + MER5B DNA MER1_type 126 172 -6 195 328 33 0 chr2 119109199 119109260 -131578594 + L2 LINE L2 2937 2999 -273 243 272 0 0 chr2 119110298 119110379 -131577475 + (TG)n Simple_repeat Simple_repeat 1 81 0 364 335 104 32 chr2 119112004 119112380 -131575474 - L3 LINE CR1 -213 1364 962 1838 250 97 10 chr2 119112446 119113047 -131574807 + L1ME3A LINE L1 5363 6015 -155 1311 7 0 0 chr2 119115271 119115414 -131572440 - AluYa5/8 SINE Alu 0 310 168 1932 200 66 16 chr2 119115799 119116239 -131571615 + MLT1C LTR MaLR 6 467 0 2001 126 0 0 chr2 119116562 119116833 -131571021 - AluSg SINE Alu -12 298 28 251 282 52 6 chr2 119118240 119118374 -131569480 + MIR SINE MIR 16 152 -57 254 269 222 19 chr2 119118500 119118608 -131569246 + MARNA DNA Mariner 19 148 -438 2350 48 0 7 chr2 119118635 119118925 -131568929 + L1PA8 LINE L1 5885 6172 0 437 259 102 10 chr2 119119180 119119377 -131568477 + HAL1 LINE L1 1449 1663 -844 376 118 40 0 chr2 119119377 119119453 -131568401 + GA-rich Low_complexity Low_complexity 1 79 0 228 182 26 78 chr2 119119463 119119540 -131568314 + HAL1 LINE L1 1625 1697 -810 1909 179 0 3 chr2 119119543 119119839 -131568015 + AluJb SINE Alu 1 295 -17 254 187 11 0 chr2 119119841 119119932 -131567922 + (TA)n Simple_repeat Simple_repeat 1 92 0 2174 153 23 26 chr2 119120290 119120615 -131567239 + L1PB4 LINE L1 5650 5975 -181 2035 103 18 0 chr2 119120615 119120888 -131566966 + AluSx SINE Alu 22 299 -13 2174 153 23 26 chr2 119120888 119120953 -131566901 + L1PB4 LINE L1 5975 6039 -117 43661 33 22 2 chr2 119120956 119126982 -131560872 + L1PA2 LINE L1 2 6151 -4 601 188 36 7 chr2 119126982 119127115 -131560739 + L1PA16 LINE L1 6024 6165 -1 288 246 98 76 chr2 119127612 119127889 -131559965 + HAL1 LINE L1 2169 2451 -56 1179 263 78 48 chr2 119127964 119128346 -131559508 - LTR33 LTR ERVL -6 515 113 746 214 169 0 chr2 119128346 119128524 -131559330 - MER3 DNA MER1_type 0 209 2 1179 263 78 48 chr2 119128524 119128639 -131559215 - LTR33 LTR ERVL -408 113 3 1100 269 89 14 chr2 119129092 119129520 -131558334 + LTR16B LTR ERVL 5 464 0 1333 211 84 34 chr2 119130322 119130739 -131557115 - MER113 DNA MER1_type? -49 472 35 2313 103 6 3 chr2 119130884 119131195 -131556659 - AluSx SINE Alu 0 312 1 187 254 111 0 chr2 119131223 119131286 -131556568 + L2 LINE L2 3203 3272 0 1113 176 9 14 chr2 119131346 119131556 -131556298 + MER2 DNA MER2_type 1 209 -136 291 286 180 6 chr2 119131762 119131940 -131555914 - MIR SINE MIR -8 254 46 2259 93 0 0 chr2 119132422 119132702 -131555152 + AluSx SINE Alu 19 298 -14 892 259 177 42 chr2 119133324 119133776 -131554078 - MLT1H LTR MaLR -4 545 33 187 367 92 0 chr2 119134685 119134783 -131553071 - L2 LINE L2 -27 3245 3139 284 244 70 0 chr2 119135066 119135152 -131552702 + MIR SINE MIR 109 200 -62 655 241 94 6 chr2 119135340 119135510 -131552344 - MER5A DNA MER1_type -4 185 1 181 246 97 97 chr2 119136090 119136224 -131551630 + MIR SINE MIR 26 159 -103 363 254 0 0 chr2 119136780 119136945 -131550909 + (CA)n Simple_repeat Simple_repeat 2 166 0 1576 246 51 2 chr2 119137232 119137643 -131550211 - LTR16A LTR ERVL -2 448 18 328 284 111 24 chr2 119137954 119138184 -131549670 - MIR3 SINE MIR 0 262 13 858 247 71 0 chr2 119138427 119138666 -131549188 + MIR SINE MIR 1 256 -6 1289 271 121 29 chr2 119138722 119139442 -131548412 - L2 LINE L2 -1079 2235 1450 459 222 111 7 chr2 119140905 119141040 -131546814 + MIR SINE MIR 57 205 -57 689 274 29 17 chr2 119142012 119142249 -131545605 + MIR SINE MIR 25 262 0 1773 153 7 14 chr2 119144783 119145245 -131542609 + AluJo SINE Alu 10 469 0 43314 37 22 1 chr2 119145517 119151542 -131536312 + L1PA3 LINE L1 3 6155 0 201 226 0 38 chr2 119151600 119151653 -131536201 + (CAT)n Simple_repeat Simple_repeat 3 53 0 235 184 71 113 chr2 119151876 119152017 -131535837 - L1ME4a LINE L1 -1 6120 5986 182 111 0 89 chr2 119152603 119152648 -131535206 + L2 LINE L2 3020 3060 -253 222 37 0 0 chr2 119152883 119152910 -131534944 + (CA)n Simple_repeat Simple_repeat 2 28 0 274 192 26 90 chr2 119154545 119154623 -131533231 + L2 LINE L2 3189 3261 -11 1683 170 0 4 chr2 119155062 119155338 -131532516 - AluJo SINE Alu -37 275 1 940 278 106 19 chr2 119155474 119155892 -131531962 - LTR16A LTR ERVL 0 457 2 714 360 51 15 chr2 119156059 119156584 -131531270 - ERVL LTR ERVL -441 5323 4780 1264 304 36 17 chr2 119156629 119157100 -131530754 - ERVL LTR ERVL -1086 4678 4199 3412 345 66 24 chr2 119157229 119157309 -131530545 - ERVL LTR ERVL -1808 3956 3881 561 88 0 0 chr2 119157309 119157389 -131530465 + (TA)n Simple_repeat Simple_repeat 2 81 0 3412 345 66 24 chr2 119157389 119158571 -131529283 - ERVL LTR ERVL -1883 3881 2750 2191 123 47 33 chr2 119158571 119158930 -131528924 + THE1B LTR MaLR 1 364 0 11830 96 8 1 chr2 119158930 119160500 -131527354 + THE1B-int LTR MaLR 1 1580 0 2154 110 51 37 chr2 119160502 119160857 -131526997 + THE1B LTR MaLR 5 364 0 3412 345 66 24 chr2 119160857 119162639 -131525215 - ERVL LTR ERVL -3014 2750 644 326 305 29 0 chr2 119163121 119163226 -131524628 - ERVL LTR ERVL -4888 108 1 801 262 50 80 chr2 119163238 119163661 -131524193 - LTR16A LTR ERVL -40 410 1 205 245 38 0 chr2 119163938 119163991 -131523863 + A-rich Low_complexity Low_complexity 3 57 0 232 207 69 0 chr2 119165181 119165239 -131522615 - MLT1J LTR MaLR -213 298 237 699 42 67 13 chr2 119165662 119165887 -131521967 + (TA)n Simple_repeat Simple_repeat 1 237 0 1141 265 59 39 chr2 119165887 119166328 -131521526 + MER74A LTR ERVL 24 473 -85 259 303 97 23 chr2 119166182 119166357 -131521497 - MER88 LTR ERVL -198 266 79 * 208 268 84 0 chr2 119167186 119167257 -131520597 - MER5C DNA MER1_type 0 324 248 258 290 60 40 chr2 119167373 119167473 -131520381 - MER5C DNA MER1_type -202 122 21 493 278 68 26 chr2 119169204 119169395 -131518459 - MIR SINE MIR -44 218 20 295 285 55 19 chr2 119169399 119169518 -131518336 + MIR3 SINE MIR 34 156 -52 884 291 118 41 chr2 119169520 119169987 -131517867 + MLT1J LTR MaLR 2 504 -7 203 0 0 36 chr2 119171061 119171089 -131516765 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 803 304 27 14 chr2 119171090 119171383 -131516471 - L2 LINE L2 -14 3299 3003 42886 39 23 3 chr2 119171448 119177479 -131510375 + L1PA3 LINE L1 1 6155 0 1477 305 93 23 chr2 119177668 119178418 -131509436 - L2 LINE L2 -385 2929 2127 447 259 184 17 chr2 119178548 119178722 -131509132 + MIR SINE MIR 1 203 -59 193 360 45 0 chr2 119179503 119179614 -131508240 + L2 LINE L2 2925 3040 -232 275 342 110 7 chr2 119180198 119180353 -131507501 + MIR SINE MIR 75 245 -17 261 362 61 31 chr2 119180695 119180858 -131506996 + MIR SINE MIR 21 188 -74 233 200 132 90 chr2 119180938 119181112 -131506742 - Charlie8 DNA MER1_type -1026 1391 117 1962 149 10 0 chr2 119181514 119181816 -131506038 - AluJb SINE Alu -3 309 5 733 204 0 36 chr2 119181822 119181989 -131505865 + MER5B DNA MER1_type 17 177 -1 2126 160 56 48 chr2 119182383 119182845 -131505009 + L1MA9 LINE L1 5847 6312 0 185 399 89 6 chr2 119183013 119183171 -131504683 + MIR3 SINE MIR 30 200 -8 260 309 83 42 chr2 119184442 119184610 -131503244 - MIR SINE MIR -65 197 23 180 348 0 0 chr2 119184652 119184698 -131503156 + L2 LINE L2 3211 3256 -16 2537 50 3 10 chr2 119185081 119185384 -131502470 + AluY SINE Alu 1 301 -10 1065 229 23 0 chr2 119185428 119185642 -131502212 + MER20 DNA MER1_type 1 219 0 887 174 96 0 chr2 119186456 119186623 -131501231 + MER5A DNA MER1_type 1 183 -6 396 255 160 11 chr2 119187235 119187423 -131500431 - MLT1K LTR MaLR -246 342 127 2181 103 3 3 chr2 119187675 119187965 -131499889 + AluSc SINE Alu 1 290 -19 231 240 0 0 chr2 119188104 119188154 -131499700 + (TAA)n Simple_repeat Simple_repeat 2 51 0 587 233 244 10 chr2 119188167 119188360 -131499494 - MIR SINE MIR -22 240 3 666 282 50 30 chr2 119188536 119189301 -131498553 + L1MC4a LINE L1 5086 5620 -544 33 43 0 0 chr2 119189503 119189550 -131498304 + AT_rich Low_complexity Low_complexity 1 47 0 346 286 20 0 chr2 119190359 119190457 -131497397 + MIR3 SINE MIR 85 184 -24 307 337 70 6 chr2 119190773 119190945 -131496909 + MIR SINE MIR 64 246 -16 25 0 0 0 chr2 119191547 119191572 -131496282 + AT_rich Low_complexity Low_complexity 1 25 0 441 157 174 17 chr2 119191786 119191901 -131495953 + LTR16A1 LTR ERVL 325 457 0 437 295 31 16 chr2 119192336 119192465 -131495389 - L2 LINE L2 0 3272 3142 585 174 97 14 chr2 119192958 119193102 -131494752 - LTR16A1 LTR ERVL 0 457 302 3303 134 12 6 chr2 119193235 119193726 -131494128 - LOR1a LTR ERV1 -3 494 1 1806 152 13 10 chr2 119194077 119194386 -131493468 + L1MC1 LINE L1 5319 5628 -705 1271 172 32 9 chr2 119194386 119194595 -131493259 + L1MC1 LINE L1 6107 6332 -1 275 191 248 9 chr2 119195647 119195752 -131492102 - L2 LINE L2 -257 3056 2927 2977 161 71 17 chr2 119195754 119196349 -131491505 + L1MB8 LINE L1 5552 6178 0 180 0 0 0 chr2 119197125 119197145 -131490709 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 550 251 205 5 chr2 119198059 119198254 -131489600 + MIR SINE MIR 23 256 -6 469 270 80 31 chr2 119198754 119198917 -131488937 - MIR SINE MIR -82 180 10 2322 78 3 0 chr2 119198974 119199257 -131488597 + AluY SINE Alu 1 284 -27 229 324 143 19 chr2 119199609 119199714 -131488140 - L2 LINE L2 -9 3263 3146 183 320 64 13 chr2 119199876 119199954 -131487900 - L2 LINE L2 -257 3015 2934 1027 185 19 33 chr2 119199969 119200180 -131487674 + AluJo SINE Alu 89 296 -16 222 288 14 14 chr2 119200412 119200485 -131487369 + MIR SINE MIR 19 91 -171 1642 240 3 6 chr2 119201021 119201359 -131486495 - MER58B DNA MER1_type -1 340 4 187 323 43 21 chr2 119201395 119201488 -131486366 - MIR3 SINE MIR -27 181 87 225 0 0 0 chr2 119202473 119202498 -131485356 + (GA)n Simple_repeat Simple_repeat 2 26 0 14782 128 38 31 chr2 119202502 119203792 -131484062 + Tigger1 DNA MER2_type 1 1314 -1104 2400 140 16 24 chr2 119203792 119204170 -131483684 + THE1C LTR MaLR 1 375 0 14782 128 38 31 chr2 119204170 119205274 -131482580 + Tigger1 DNA MER2_type 1314 2410 -8 180 0 0 0 chr2 119205274 119205294 -131482560 + (TA)n Simple_repeat Simple_repeat 1 20 0 1078 166 49 40 chr2 119205761 119206008 -131481846 + L1PA16 LINE L1 5914 6162 -4 410 272 18 18 chr2 119206380 119206494 -131481360 - L2 LINE L2 -3 3310 3197 471 267 69 59 chr2 119206779 119206981 -131480873 - MIR SINE MIR -22 240 37 234 263 13 90 chr2 119208369 119208525 -131479329 + L2 LINE L2 2917 3060 -212 4141 224 136 25 chr2 119209468 119209661 -131478193 + L1MDa LINE L1 11 181 -6359 195 100 0 0 chr2 119209661 119209691 -131478163 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 4141 224 136 25 chr2 119209691 119210803 -131477051 + L1MDa LINE L1 181 1462 -5078 287 83 0 21 chr2 119210846 119210894 -131476960 + (TG)n Simple_repeat Simple_repeat 2 48 0 369 138 0 164 chr2 119210900 119211016 -131476838 + L1MD1 LINE L1 6146 6242 0 614 329 24 0 chr2 119211233 119211443 -131476411 - MIR SINE MIR -6 256 42 6551 101 6 6 chr2 119211448 119212598 -131475256 + L1PA13 LINE L1 5012 6161 -2 308 356 83 17 chr2 119213313 119213493 -131474361 + L1ME4a LINE L1 5400 5591 -530 599 256 205 19 chr2 119213511 119213886 -131473968 + L1ME4a LINE L1 5675 6119 -2 219 130 0 43 chr2 119214333 119214379 -131473475 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 23 33 0 0 chr2 119215144 119215174 -131472680 + AT_rich Low_complexity Low_complexity 1 30 0 271 390 76 5 chr2 119215255 119215465 -131472389 - MIR SINE MIR -34 228 4 264 200 0 0 chr2 119216285 119216340 -131471514 - L1PB4 LINE L1 0 6156 6102 228 222 32 0 chr2 119216522 119216585 -131471269 + (TA)n Simple_repeat Simple_repeat 1 65 0 220 282 64 13 chr2 119217869 119217947 -131469907 - L2 LINE L2 -5 3267 3186 1357 153 5 14 chr2 119217952 119218174 -131469680 - AluSg/x SINE Alu -12 300 81 687 322 85 31 chr2 119218496 119218802 -131469052 + MLT1L LTR MaLR 128 469 -146 1220 116 156 0 chr2 119218802 119219001 -131468853 - MER30 DNA MER1_type 0 230 1 687 322 85 31 chr2 119219001 119219151 -131468703 + MLT1L LTR MaLR 469 609 -6 691 255 22 27 chr2 119219884 119220068 -131467786 - MIR SINE MIR -70 192 10 253 204 0 0 chr2 119220182 119220231 -131467623 - L2 LINE L2 -8 3264 3216 180 89 44 22 chr2 119221135 119221180 -131466674 + CT-rich Low_complexity Low_complexity 2 47 0 222 315 102 31 chr2 119221251 119221378 -131466476 + L3 LINE CR1 631 766 -811 647 165 17 108 chr2 119221385 119221561 -131466293 - MER6B DNA MER2_type -48 162 3 221 244 0 0 chr2 119222206 119222251 -131465603 - L3 LINE CR1 -7 1570 1526 1909 205 71 53 chr2 119222292 119222785 -131465069 + MLT1D LTR MaLR 4 505 0 495 272 94 47 chr2 119222801 119222992 -131464862 - MIR SINE MIR -58 204 5 303 302 47 17 chr2 119223086 119223258 -131464596 - MER112 DNA MER1_type -83 177 1 464 292 146 60 chr2 119224321 119224787 -131463067 + L2 LINE L2 2273 2778 -536 296 281 55 60 chr2 119225036 119225235 -131462619 + L2 LINE L2 3116 3313 0 528 217 105 21 chr2 119225471 119225614 -131462240 + L1ME1 LINE L1 5991 6145 -21 1150 171 57 19 chr2 119226235 119226446 -131461408 - MER20 DNA MER1_type 0 219 1 34 0 0 0 chr2 119226479 119226513 -131461341 + AT_rich Low_complexity Low_complexity 1 34 0 420 309 137 11 chr2 119226783 119226958 -131460896 - L3 LINE CR1 -65 1512 1316 716 191 21 28 chr2 119226984 119227125 -131460729 - LTR12 LTR ERV1 -216 498 359 327 208 0 0 chr2 119227125 119227197 -131460657 - LTR30 LTR ERV1 -98 624 553 1442 150 13 23 chr2 119227201 119227474 -131460380 - LTR12 LTR ERV1 -408 2030 55 258 231 0 0 chr2 119227476 119227528 -131460326 - LTR30 LTR ERV1 -670 52 1 274 330 0 0 chr2 119227992 119228095 -131459759 + GA-rich Low_complexity Low_complexity 2 104 0 2089 114 6 25 chr2 119229612 119229927 -131457927 + AluSx SINE Alu 1 309 -3 226 212 30 61 chr2 119229982 119230048 -131457806 - L2 LINE L2 0 3313 3250 254 227 91 0 chr2 119231146 119231212 -131456642 - MIR SINE MIR -107 155 84 1740 232 47 45 chr2 119231415 119231924 -131455930 + MER74A LTR ERVL 5 514 -44 935 312 56 33 chr2 119232515 119232941 -131454913 + MLT1J LTR MaLR 35 470 -41 445 327 19 13 chr2 119233524 119233680 -131454174 + MIR SINE MIR 17 173 -89 356 165 19 29 chr2 119234119 119234222 -131453632 + GA-rich Low_complexity Low_complexity 2 103 0 231 152 0 0 chr2 119234221 119234267 -131453587 + (TAG)n Simple_repeat Simple_repeat 2 47 0 * 801 237 125 18 chr2 119234347 119234732 -131453122 - LTR33 LTR ERVL 0 521 1 2136 157 91 140 chr2 119234896 119235278 -131452576 - MLT1F1 LTR MaLR 0 567 223 2302 88 14 0 chr2 119235278 119235573 -131452281 - AluSx SINE Alu 0 312 14 2136 157 91 140 chr2 119235573 119235784 -131452070 - MLT1F1 LTR MaLR -344 223 3 183 100 0 0 chr2 119236193 119236223 -131451631 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 509 267 58 23 chr2 119237560 119237732 -131450122 + LTR16A1 LTR ERVL 280 457 0 2204 123 0 0 chr2 119237850 119238152 -131449702 + AluSc SINE Alu 1 302 -7 1011 268 48 69 chr2 119238284 119238702 -131449152 - MLT1I LTR MaLR 0 409 1 447 315 61 20 chr2 119238881 119239078 -131448776 + MIR SINE MIR 2 206 -56 247 409 63 0 chr2 119239178 119239320 -131448534 - L2 LINE L2 -1 3271 3121 242 261 225 18 chr2 119241723 119241834 -131446020 - MIR SINE MIR -8 254 121 216 135 0 0 chr2 119241983 119242020 -131445834 + (CA)n Simple_repeat Simple_repeat 1 37 0 510 173 55 80 chr2 119242058 119242295 -131445559 + L1MC5 LINE L1 5752 5982 -1826 25 0 0 0 chr2 119242420 119242445 -131445409 + AT_rich Low_complexity Low_complexity 1 25 0 1149 253 61 30 chr2 119243100 119243463 -131444391 + L1MC5 LINE L1 7158 7531 -430 2172 186 46 78 chr2 119243811 119244005 -131443849 + MLT1D LTR MaLR 1 200 -305 2080 117 0 0 chr2 119244005 119244317 -131443537 - AluSx SINE Alu 0 312 1 2172 186 46 78 chr2 119244317 119244643 -131443211 + MLT1D LTR MaLR 200 505 0 1278 221 4 24 chr2 119245155 119245351 -131442503 - MLT1A1 LTR MaLR -1 364 173 2488 127 8 27 chr2 119245351 119245722 -131442132 - THE1B LTR MaLR 0 364 1 1278 221 4 24 chr2 119245722 119245779 -131442075 - MLT1A1 LTR MaLR -192 173 116 513 152 8 37 chr2 119246808 119246939 -131440915 - MER20 DNA MER1_type -1 218 1 2681 175 42 12 chr2 119246980 119247477 -131440377 - MER34 LTR ERV1 -4 538 27 827 235 33 0 chr2 119248023 119248206 -131439648 + MER5A DNA MER1_type 1 189 0 349 269 337 0 chr2 119248929 119249104 -131438750 + MIR SINE MIR 26 259 -3 930 204 0 0 chr2 119249324 119249500 -131438354 + L1MB1 LINE L1 5990 6165 -3 340 307 0 10 chr2 119249540 119249641 -131438213 - MIR SINE MIR -160 102 3 366 259 215 0 chr2 119249926 119250061 -131437793 + MIR SINE MIR 92 255 -7 196 133 0 0 chr2 119250103 119250133 -131437721 + L2 LINE L2 3261 3290 -23 218 125 0 0 chr2 119250903 119250935 -131436919 + L2 LINE L2 3227 3258 -14 2497 89 0 0 chr2 119251780 119252084 -131435770 + AluSg SINE Alu 2 305 -5 18505 139 38 14 chr2 119252337 119255286 -131432568 + L1M1 LINE L1 13 3030 -4535 4504 119 30 4 chr2 119255288 119255967 -131431887 + L1MA3 LINE L1 5609 6304 -1 263 273 30 40 chr2 119256290 119256389 -131431465 + MIR3 SINE MIR 63 160 -48 937 195 82 10 chr2 119256389 119256584 -131431270 + MER58A DNA MER1_type 1 209 -15 2269 112 0 7 chr2 119256599 119256904 -131430950 + AluSg SINE Alu 1 303 -7 604 254 190 57 chr2 119256994 119257431 -131430423 - MLT1K LTR MaLR -6 582 88 1202 144 52 0 chr2 119257541 119257735 -131430119 + L1PA16 LINE L1 5963 6166 0 293 258 56 0 chr2 119258555 119258644 -131429210 - MIR SINE MIR -43 219 126 952 146 12 2 chr2 119258971 119259139 -131428715 + MLT1B LTR MaLR 255 390 0 355 278 16 40 chr2 119260857 119261011 -131426843 + MIR SINE MIR 2 150 -65 296 272 75 54 chr2 119261421 119261568 -131426286 + MER89 LTR ERV1 383 532 -27 2468 155 46 17 chr2 119262527 119262941 -131424913 + MSTB LTR MaLR 1 426 0 464 135 4 256 chr2 119262994 119263224 -131424630 - MER91B DNA MER1_type -11 179 8 226 283 46 123 chr2 119264636 119264855 -131422999 - MIR SINE MIR -59 203 2 293 228 24 16 chr2 119264882 119265009 -131422845 + GA-rich Low_complexity Low_complexity 5 132 0 261 230 19 0 chr2 119265192 119265301 -131422553 + GA-rich Low_complexity Low_complexity 1 111 0 7275 40 1 1 chr2 119266253 119267111 -131420743 - L1PA5 LINE L1 0 6154 5297 2188 50 4 0 chr2 119267108 119267387 -131420467 + L1PA5 LINE L1 5015 5294 -852 * 204 40 0 0 chr2 119267517 119267542 -131420312 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 213 39 0 0 chr2 119267620 119267646 -131420208 + (TC)n Simple_repeat Simple_repeat 1 26 0 349 319 18 81 chr2 119268538 119268873 -131418981 - L1ME4a LINE L1 -84 6037 5724 295 290 90 20 chr2 119269730 119269830 -131418024 + L2 LINE L2 3156 3262 -10 217 308 28 37 chr2 119270321 119270428 -131417426 + MIR SINE MIR 59 164 -98 1066 215 4 0 chr2 119270538 119270799 -131417055 + L1MA4 LINE L1 6028 6289 -11 529 284 74 47 chr2 119270833 119271152 -131416702 + MLT1G LTR MaLR 2 295 -300 2353 111 19 8 chr2 119271246 119271614 -131416240 - LTR57 LTR ERVL -39 372 1 332 192 74 9 chr2 119271619 119271828 -131416026 + MLT1F1 LTR MaLR 313 555 0 14403 27 1 0 chr2 119271923 119274445 -131413409 + L1PA2 LINE L1 3680 6202 0 261 163 0 0 chr2 119274570 119274619 -131413235 + (TGGA)n Simple_repeat Simple_repeat 1 49 0 252 320 82 0 chr2 119274859 119274956 -131412898 + L2 LINE L2 3161 3265 -48 714 239 148 13 chr2 119275445 119275675 -131412179 - MIR SINE MIR 0 262 2 584 244 92 39 chr2 119276054 119276337 -131411517 + MLT1I LTR MaLR 9 306 -103 247 250 62 9 chr2 119276378 119276490 -131411364 - L1MC4 LINE L1 -1 8041 7924 427 143 13 0 chr2 119276696 119276773 -131411081 + MLT1I LTR MaLR 332 409 0 2767 262 58 47 chr2 119277123 119278074 -131409780 + L2 LINE L2 1969 2929 -385 330 208 117 0 chr2 119278624 119278701 -131409153 + MIR3 SINE MIR 122 207 -1 217 305 37 0 chr2 119279296 119279378 -131408476 + L2 LINE L2 3227 3311 -2 2277 96 0 37 chr2 119280384 119280706 -131407148 + AluSx SINE Alu 1 310 -2 2404 99 0 0 chr2 119280723 119281026 -131406828 + AluSq SINE Alu 1 303 -10 489 295 18 30 chr2 119282833 119282999 -131404855 + MER5B DNA MER1_type 15 178 0 1372 250 113 19 chr2 119283023 119283522 -131404332 + MLT1G1 LTR MaLR 11 595 0 1050 191 52 20 chr2 119284035 119284287 -131403567 - MLT1B LTR MaLR -130 260 1 207 145 101 72 chr2 119284445 119284514 -131403340 - MIR SINE MIR -55 207 137 303 304 105 21 chr2 119284524 119284547 -131403307 - MIR SINE MIR -19 189 169 1527 135 10 66 chr2 119284547 119284851 -131403003 - L1PA16 LINE L1 -7 6159 5873 303 304 105 21 chr2 119284851 119284986 -131402868 - MIR SINE MIR -39 169 7 3426 70 2 2 chr2 119285046 119285500 -131402354 + L1PA8 LINE L1 5719 6172 0 1336 225 152 8 chr2 119285645 119286040 -131401814 - MER31B LTR ERV1 -14 452 1 3110 139 9 42 chr2 119286823 119287190 -131400664 + L1PA16 LINE L1 5607 5950 -216 1889 137 13 48 chr2 119287190 119287503 -131400351 + AluSx SINE Alu 1 302 -10 3110 139 9 42 chr2 119287503 119287709 -131400145 + L1PA16 LINE L1 5950 6161 -5 27 0 0 0 chr2 119288236 119288263 -131399591 + AT_rich Low_complexity Low_complexity 1 27 0 23937 36 3 1 chr2 119288280 119291989 -131395865 - L1PA3 LINE L1 0 6155 2440 207 204 0 23 chr2 119292137 119292181 -131395673 + GA-rich Low_complexity Low_complexity 2 44 0 1209 239 94 35 chr2 119292688 119293067 -131394787 + MLT2B1 LTR ERVL 1 522 -32 420 82 0 0 chr2 119293067 119293128 -131394726 + (CA)n Simple_repeat Simple_repeat 1 61 0 1209 239 94 35 chr2 119293128 119293161 -131394693 + MLT2B1 LTR ERVL 522 552 -2 280 221 43 36 chr2 119293200 119293340 -131394514 + (CAGA)n Simple_repeat Simple_repeat 2 142 0 183 218 0 0 chr2 119293350 119293405 -131394449 + (CAGAGA)n Simple_repeat Simple_repeat 4 58 0 381 178 263 8 chr2 119293732 119293850 -131394004 + MER5B DNA MER1_type 19 166 -12 533 308 59 0 chr2 119294055 119294224 -131393630 - MIR SINE MIR -48 214 36 21 36 0 0 chr2 119294562 119294590 -131393264 + AT_rich Low_complexity Low_complexity 1 28 0 352 237 27 73 chr2 119295057 119295208 -131392646 + L1ME3A LINE L1 4396 4542 -1604 270 165 55 142 chr2 119295324 119295451 -131392403 + MER106B DNA MER1_type 944 1059 0 428 299 97 29 chr2 119295464 119295577 -131392277 + L1ME3A LINE L1 4533 4637 -1509 216 0 0 0 chr2 119295577 119295601 -131392253 + (TG)n Simple_repeat Simple_repeat 1 24 0 428 299 97 29 chr2 119295601 119295898 -131391956 + L1ME3A LINE L1 4637 4971 -1175 863 170 28 0 chr2 119295954 119296095 -131391759 + MER5A DNA MER1_type 1 145 -44 622 269 30 23 chr2 119296142 119296504 -131391350 + L1ME3A LINE L1 5149 5514 -650 494 193 9 35 chr2 119296505 119296619 -131391235 - MER58 DNA MER1_type 0 2420 2310 714 288 94 23 chr2 119297035 119297428 -131390426 + L1ME3A LINE L1 5507 5927 -243 254 320 29 10 chr2 119297675 119297778 -131390076 + MER58 DNA MER1_type 175 279 -2141 193 200 0 0 chr2 119298394 119298434 -131389420 - L2 LINE L2 0 3272 3233 738 181 49 14 chr2 119299309 119299453 -131388401 - FRAM SINE Alu -26 150 2 2239 116 0 0 chr2 119299529 119299839 -131388015 + AluSx SINE Alu 1 310 -2 194 341 68 30 chr2 119300246 119300378 -131387476 - L3 LINE CR1 -11 1566 1430 41798 38 3 2 chr2 119300442 119306580 -131381274 + L1PA3 LINE L1 1 6148 -7 21 36 0 0 chr2 119306850 119306878 -131380976 + AT_rich Low_complexity Low_complexity 1 28 0 1895 192 19 3 chr2 119306969 119307328 -131380526 + MLT1A1 LTR MaLR 1 365 0 1747 193 0 7 chr2 119307634 119307939 -131379915 + AluJo SINE Alu 1 303 -9 235 301 38 65 chr2 119308817 119308829 -131379025 + MER5A DNA MER1_type 9 20 -169 2225 143 21 13 chr2 119308829 119309201 -131378653 - THE1C LTR MaLR 0 375 1 235 301 38 65 chr2 119309201 119309374 -131378480 + MER5A DNA MER1_type 20 189 0 581 283 121 49 chr2 119309775 119309868 -131377986 + L2 LINE L2 1992 2077 -1237 736 147 98 71 chr2 119309868 119309975 -131377879 - MER5A DNA MER1_type 0 189 73 2302 122 0 0 chr2 119309975 119310278 -131377576 - AluSx SINE Alu -9 303 1 736 147 98 71 chr2 119310278 119310354 -131377500 - MER5A DNA MER1_type -116 73 1 581 283 121 49 chr2 119310354 119310691 -131377163 + L2 LINE L2 2077 2453 -861 6246 34 0 3 chr2 119310700 119311484 -131376370 - L1PA4 LINE L1 -3 6152 5371 29 0 0 0 chr2 119311577 119311606 -131376248 + AT_rich Low_complexity Low_complexity 1 29 0 762 102 8 8 chr2 119311621 119311739 -131376115 - L1MA2 LINE L1 -11 6293 6176 206 338 15 0 chr2 119311780 119311848 -131376006 + L2 LINE L2 2543 2611 -703 2455 161 20 14 chr2 119311849 119312295 -131375559 - MSTB2 LTR MaLR 0 457 9 185 390 26 0 chr2 119312660 119312737 -131375117 + L2 LINE L2 2974 3052 -220 1447 261 21 14 chr2 119312751 119313187 -131374667 - MER20B DNA MER1_type -6 777 339 720 236 114 54 chr2 119313436 119313716 -131374138 - MER20B DNA MER1_type -474 309 13 285 363 32 16 chr2 119313828 119313952 -131373902 + L2 LINE L2 3145 3270 -2 528 137 32 16 chr2 119314203 119314327 -131373527 + CT-rich Low_complexity Low_complexity 1 126 0 1733 159 4 0 chr2 119314328 119314585 -131373269 - AluJo SINE Alu -54 258 1 349 309 230 29 chr2 119315195 119315616 -131372238 + HAL1 LINE L1 1994 2499 -8 1753 157 6 55 chr2 119315617 119315929 -131371925 - AluJo SINE Alu -15 297 1 2196 117 3 0 chr2 119316049 119316358 -131371496 + AluSx SINE Alu 2 311 -1 215 364 10 10 chr2 119317218 119317317 -131370537 - L2 LINE L2 -1 3312 3214 733 241 17 11 chr2 119317442 119317616 -131370238 - MIR SINE MIR -8 254 80 7736 68 0 1 chr2 119318277 119320000 -131367854 + L1PA6 LINE L1 4434 6154 0 2090 97 3 42 chr2 119320926 119321236 -131366618 - AluSq SINE Alu -3 310 13 2379 84 3 3 chr2 119321261 119321571 -131366283 - AluY SINE Alu -1 310 1 24 32 0 0 chr2 119321648 119321679 -131366175 + AT_rich Low_complexity Low_complexity 1 31 0 568 321 42 5 chr2 119322834 119323024 -131364830 - MIR SINE MIR -52 210 14 200 130 22 0 chr2 119323213 119323259 -131364595 + (TA)n Simple_repeat Simple_repeat 2 48 0 187 318 110 97 chr2 119323445 119323744 -131364110 - L2 LINE L2 0 3272 2970 230 339 113 50 chr2 119324482 119324721 -131363133 + L2 LINE L2 2437 2690 -624 224 314 0 0 chr2 119324717 119324768 -131363086 - L2 LINE L2 -14 3258 3208 * 184 324 73 37 chr2 119324789 119324925 -131362929 + L2 LINE L2 3173 3313 0 318 167 0 17 chr2 119325435 119325495 -131362359 + L1MD3 LINE L1 7730 7788 -207 282 143 0 0 chr2 119325484 119325526 -131362328 - L1PA8A LINE L1 -1169 4977 4936 * 2862 86 0 8 chr2 119325523 119326043 -131361811 + L1PA8A LINE L1 4975 5491 -640 43134 35 22 6 chr2 119326044 119332078 -131355776 + L1PA2 LINE L1 22 6155 0 5254 85 0 3 chr2 119332078 119332732 -131355122 + L1PA8A LINE L1 5476 6131 0 1086 162 95 0 chr2 119332742 119332952 -131354902 + L1MD3 LINE L1 7765 7994 -1 327 326 30 37 chr2 119333399 119333534 -131354320 + L2 LINE L2 3138 3271 -1 2173 126 7 0 chr2 119334149 119334459 -131353395 + AluSp SINE Alu 1 312 -1 316 324 46 73 chr2 119334547 119334766 -131353088 + L2 LINE L2 3054 3266 -6 236 198 148 0 chr2 119335457 119335538 -131352316 + L1MC4 LINE L1 6613 6705 -1337 21 0 0 0 chr2 119335954 119335975 -131351879 + AT_rich Low_complexity Low_complexity 1 21 0 264 250 103 60 chr2 119336100 119336332 -131351522 - MER112 DNA MER1_type -11 249 8 1124 227 0 5 chr2 119336372 119336665 -131351189 + MER2 DNA MER2_type 1 344 -1 6162 128 116 18 chr2 119338069 119339190 -131348664 - Tigger3b DNA MER2_type 0 1231 1 43336 50 7 1 chr2 119341129 119346718 -131341136 - L1PA4 LINE L1 -1 6154 522 252 0 0 0 chr2 119346718 119346746 -131341108 + (CAGG)n Simple_repeat Simple_repeat 2 29 0 43336 50 7 1 chr2 119346746 119347272 -131340582 - L1PA4 LINE L1 -5633 522 1 2343 75 20 0 chr2 119349206 119349500 -131338354 - AluY SINE Alu -11 300 1 615 278 124 39 chr2 119354211 119354567 -131333287 + L1MC4a LINE L1 5499 5884 -1924 545 279 110 45 chr2 119355289 119355748 -131332106 + MLT1L LTR MaLR 39 449 -62 938 250 138 41 chr2 119355749 119356185 -131331669 - L2 LINE L2 -3 3310 2833 2166 106 3 0 chr2 119356187 119356497 -131331357 - AluSp SINE Alu 0 311 1 1984 130 7 3 chr2 119356531 119356830 -131331024 + AluJb SINE Alu 6 305 -7 307 195 146 12 chr2 119356831 119356913 -131330941 - L2 LINE L2 -615 2699 2607 276 209 60 0 chr2 119356919 119356986 -131330868 + MER112 DNA MER1_type 81 151 -109 806 163 0 31 chr2 119357567 119357696 -131330158 + FLAM_C SINE Alu 3 127 -16 11217 28 5 0 chr2 119357696 119359006 -131328848 - L1P LINE L1 -1193 4953 3638 7993 34 0 1 chr2 119359006 119360293 -131327561 + L1PA3 LINE L1 4874 6155 0 28 29 0 0 chr2 119360293 119360328 -131327526 + AT_rich Low_complexity Low_complexity 1 35 0 526 0 0 0 chr2 119360358 119360416 -131327438 - L1P1 LINE L1 -656 5499 5442 * 3420 0 0 0 chr2 119360412 119360783 -131327071 + L1HS LINE L1 5785 6155 0 351 314 134 16 chr2 119361628 119361822 -131326032 + MIR SINE MIR 32 248 -14 296 186 7 103 chr2 119362379 119362400 -131325454 + L1MC4 LINE L1 6597 6618 -1424 15444 39 6 1 chr2 119362400 119363796 -131324058 + L1PA5 LINE L1 3590 4993 -1161 2219 99 0 0 chr2 119363796 119364100 -131323754 + AluY SINE Alu 1 304 0 15444 39 6 1 chr2 119364100 119365253 -131322601 + L1PA5 LINE L1 4993 6139 -15 296 186 7 103 chr2 119365253 119365376 -131322478 + L1MC4 LINE L1 6618 6727 -1315 1009 196 54 80 chr2 119365568 119365904 -131321950 + MER46C DNA MER2_type 12 338 0 441 258 0 21 chr2 119366275 119366372 -131321482 - MER5B DNA MER1_type -29 149 55 455 332 26 31 chr2 119366704 119366897 -131320957 + MER117 DNA MER1_type 2 193 -4 4193 186 30 24 chr2 119367439 119368286 -131319568 + L1MC1 LINE L1 75 926 -5500 * 29050 34 4 0 chr2 119368283 119372495 -131315359 - L1PA3 LINE L1 -1 6154 1928 3343 150 66 12 chr2 119372494 119373743 -131314111 + L1MC1 LINE L1 912 2325 -4101 * 622 214 71 8 chr2 119373743 119373869 -131313985 + FLAM_A SINE Alu 1 134 -8 10663 204 47 28 chr2 119373880 119375132 -131312722 + L1MC1 LINE L1 2363 3590 -3023 2266 108 0 0 chr2 119375132 119375427 -131312427 + AluSg SINE Alu 1 295 -15 10663 204 47 28 chr2 119375427 119378384 -131309470 + L1MC1 LINE L1 3590 6607 -6 271 158 0 0 chr2 119378415 119378453 -131309401 - 5S rRNA rRNA -83 38 1 319 338 129 37 chr2 119379143 119379415 -131308439 + L2 LINE L2 2963 3259 -13 933 155 0 7 chr2 119379782 119379937 -131307917 - LTR32 LTR ERVL 0 471 318 1945 136 30 24 chr2 119379948 119380278 -131307576 - LTR32 LTR ERVL -130 341 10 270 0 0 0 chr2 119381123 119381153 -131306701 + (TTA)n Simple_repeat Simple_repeat 2 31 0 459 311 55 25 chr2 119381247 119381482 -131306372 - MIR SINE MIR -19 243 2 430 321 18 0 chr2 119382224 119382333 -131305521 + L2 LINE L2 3203 3313 0 1195 284 54 65 chr2 119382339 119382860 -131304994 + LTR40a LTR ERVL 5 519 0 6135 130 28 44 chr2 119384996 119385582 -131302272 + L1MA7 LINE L1 3669 4230 -1916 2051 127 0 3 chr2 119385582 119385866 -131301988 - AluSc SINE Alu -24 285 3 6135 130 28 44 chr2 119385866 119386401 -131301453 + L1MA7 LINE L1 4230 4772 -1374 2185 133 80 17 chr2 119386401 119386753 -131301101 - THE1C LTR MaLR 0 375 2 9977 111 41 42 chr2 119386762 119388335 -131299519 - THE1C-int LTR MaLR -8 1572 1 2416 124 47 11 chr2 119388335 119388697 -131299157 - THE1C LTR MaLR 0 375 1 4906 170 22 36 chr2 119388697 119389738 -131298116 + L1MA7 LINE L1 4768 5822 -469 195 42 0 0 chr2 119389738 119389762 -131298092 + (TA)n Simple_repeat Simple_repeat 1 24 0 4906 170 22 36 chr2 119389762 119390200 -131297654 + L1MA7 LINE L1 5822 6227 -64 255 61 0 0 chr2 119390200 119390233 -131297621 + (TATG)n Simple_repeat Simple_repeat 2 34 0 4906 170 22 36 chr2 119390233 119390253 -131297601 + L1MA7 LINE L1 6227 6246 -45 741 134 34 8 chr2 119390260 119390379 -131297475 + L1MA3 LINE L1 17 138 -7427 2077 181 34 31 chr2 119390379 119390930 -131296924 - MLT2A2 LTR ERVL 0 554 1 19379 132 16 4 chr2 119390930 119393781 -131294073 + L1MA3 LINE L1 134 3019 -4546 1036 183 0 0 chr2 119393781 119393950 -131293904 + AluSx SINE Alu 1 169 -143 1875 137 9 22 chr2 119393950 119394300 -131293554 - MER4A LTR ERV1 0 664 261 527 133 0 12 chr2 119394300 119394383 -131293471 - MER4A LTR ERV1 -566 98 17 760 194 43 0 chr2 119394393 119394532 -131293322 + AluSx SINE Alu 166 310 -2 26533 46 12 6 chr2 119394576 119399090 -131288764 + L1PA4 LINE L1 3020 7574 0 496 195 20 38 chr2 119399114 119399254 -131288600 + L1MA3 LINE L1 3612 3751 -3814 700 121 14 0 chr2 119399259 119399400 -131288454 + (GGA)n Simple_repeat Simple_repeat 1 143 0 2124 120 10 3 chr2 119399422 119399730 -131288124 + AluSg SINE Alu 1 310 0 13244 162 28 61 chr2 119399730 119400337 -131287517 + L1MA3 LINE L1 3735 4360 -3364 2139 124 0 0 chr2 119400337 119400627 -131287227 + AluSc SINE Alu 1 290 -19 13244 162 28 61 chr2 119400627 119402202 -131285652 + L1MA3 LINE L1 4360 5985 -1739 1118 91 0 0 chr2 119402202 119402345 -131285509 + AluSg/x SINE Alu 160 302 -10 13244 162 28 61 chr2 119402345 119404001 -131283853 + L1MA3 LINE L1 5985 7568 -156 2332 93 0 3 chr2 119404001 119404292 -131283562 - AluSc SINE Alu -19 290 1 13244 162 28 61 chr2 119404292 119404445 -131283409 + L1MA3 LINE L1 7568 7724 0 339 103 0 0 chr2 119404457 119404515 -131283339 + L1MA7 LINE L1 6233 6290 -1 1844 211 67 8 chr2 119404976 119405452 -131282402 + MLT1F LTR MaLR 36 534 -8 378 293 96 30 chr2 119405594 119405761 -131282093 - MIR SINE MIR -71 191 14 633 346 4 4 chr2 119405761 119406027 -131281827 + L1ME3 LINE L1 5660 5925 -237 * 1984 131 0 5 chr2 119405811 119406199 -131281655 + L1PB3 LINE L1 5710 6146 -8 23 0 0 0 chr2 119406199 119406222 -131281632 + AT_rich Low_complexity Low_complexity 1 23 0 772 227 76 42 chr2 119406269 119406533 -131281321 + ORSL DNA AcHobo 1 273 -2 2347 95 0 0 chr2 119407025 119407321 -131280533 - AluSc SINE Alu -13 296 1 216 39 0 0 chr2 119407427 119407453 -131280401 + MIR SINE MIR 122 147 -61 263 219 203 62 chr2 119407673 119407801 -131280053 + MLT1I LTR MaLR 303 407 -2 205 295 133 0 chr2 119408409 119408514 -131279340 - MIR3 SINE MIR -80 128 10 411 262 186 9 chr2 119409302 119409477 -131278377 - MIR SINE MIR -23 239 42 2418 65 0 0 chr2 119412271 119412562 -131275292 - AluY SINE Alu -16 295 5 357 258 214 6 chr2 119412670 119412829 -131275025 + MIR SINE MIR 68 259 -3 1386 226 99 14 chr2 119413038 119413383 -131274471 + MLT1A2 LTR MaLR 1 374 0 444 235 84 80 chr2 119413411 119413649 -131274205 + L2 LINE L2 3075 3313 0 1535 257 26 13 chr2 119413656 119414112 -131273742 + LTR40c LTR ERVL 1 462 -3 1975 141 0 0 chr2 119414194 119414484 -131273370 - AluSx SINE Alu -3 309 20 2082 154 0 0 chr2 119414737 119415043 -131272811 - AluSq SINE Alu -7 306 1 863 167 69 17 chr2 119416787 119416873 -131270981 - MER5A DNA MER1_type -4 185 105 2625 149 27 5 chr2 119416873 119417275 -131270579 + LTR57 LTR ERVL 1 411 0 863 167 69 17 chr2 119417275 119417362 -131270492 - MER5A DNA MER1_type -84 105 3 476 313 50 0 chr2 119417422 119417582 -131270272 - MIR SINE MIR -19 243 76 527 164 100 0 chr2 119417651 119417761 -131270093 + MIR SINE MIR 80 200 -62 254 310 115 35 chr2 119417813 119417926 -131269928 + L2 LINE L2 3181 3302 -11 700 197 176 42 chr2 119418045 119418238 -131269616 - MER20 DNA MER1_type 0 219 1 418 132 0 88 chr2 119419236 119419327 -131268527 + L1MC/D LINE L1 5663 5745 -588 2328 100 0 3 chr2 119421298 119421598 -131266256 - AluSq SINE Alu -14 299 1 224 203 17 34 chr2 119422004 119422063 -131265791 + CT-rich Low_complexity Low_complexity 3 60 0 2671 56 53 0 chr2 119422130 119422467 -131265387 - THE1A LTR MaLR 0 355 1 574 272 107 11 chr2 119422479 119422740 -131265114 + LTR16A LTR ERVL 64 349 -101 330 67 300 0 chr2 119423416 119423476 -131264378 + MADE1 DNA Mariner 3 80 0 21 0 0 0 chr2 119424318 119424339 -131263515 + AT_rich Low_complexity Low_complexity 1 21 0 261 139 0 0 chr2 119424346 119424389 -131263465 + (TA)n Simple_repeat Simple_repeat 2 44 0 3213 181 55 23 chr2 119424400 119425103 -131262751 - L1MB4 LINE L1 -25 6155 5430 2283 110 0 3 chr2 119425844 119426154 -131261700 + AluSx SINE Alu 1 309 -3 5655 197 39 43 chr2 119426168 119426258 -131261596 + L1M4 LINE L1 3908 3997 -2181 2161 115 27 0 chr2 119426258 119426554 -131261300 + AluSx SINE Alu 9 312 0 5655 197 39 43 chr2 119426554 119428197 -131259657 + L1M4 LINE L1 3997 5636 -542 426 119 0 0 chr2 119429173 119429232 -131258622 - MLT1D LTR MaLR -2 503 445 1348 186 20 68 chr2 119429236 119429531 -131258323 - MLT1D LTR MaLR -224 281 1 1300 150 16 57 chr2 119429730 119429976 -131257878 - MER46A DNA MER2_type 0 236 1 961 270 45 84 chr2 119430499 119430984 -131256870 - MLT1J LTR MaLR -2 509 44 1929 167 6 3 chr2 119431103 119431414 -131256440 - AluJb SINE Alu 0 312 1 360 351 132 15 chr2 119431892 119432294 -131255560 + L2 LINE L2 2824 3272 0 1083 218 33 0 chr2 119432531 119432742 -131255112 - MER20 DNA MER1_type -1 218 1 295 225 0 14 chr2 119434551 119434622 -131253232 - MIR SINE MIR -104 158 89 355 257 195 62 chr2 119435004 119435374 -131252480 - LTR67 LTR ERVL -18 539 121 2420 54 13 10 chr2 119435457 119435755 -131252099 + AluY SINE Alu 1 299 -12 1246 96 0 0 chr2 119435755 119435911 -131251943 + AluSg/x SINE Alu 134 289 -23 185 175 214 68 chr2 119436377 119436480 -131251374 + MER5A DNA MER1_type 5 122 -67 310 282 0 0 chr2 119437071 119437142 -131250712 - MIR SINE MIR -181 81 11 1108 136 173 0 chr2 119437541 119437755 -131250099 - Tigger7 DNA MER2_type 0 2487 2237 22 0 0 0 chr2 119439406 119439428 -131248426 + AT_rich Low_complexity Low_complexity 1 22 0 216 303 45 0 chr2 119441919 119442008 -131245846 - L2 LINE L2 -43 3229 3137 1181 35 35 0 chr2 119442028 119442172 -131245682 - L1PA5 LINE L1 -874 5272 5124 6961 60 15 0 chr2 119442176 119443080 -131244774 + L1PA5 LINE L1 5254 6170 0 252 0 0 0 chr2 119444339 119444367 -131243487 + (A)n Simple_repeat Simple_repeat 1 28 0 3561 219 98 47 chr2 119445916 119447308 -131240546 + L1ME1 LINE L1 3284 4745 -1401 1049 205 59 47 chr2 119447308 119447756 -131240098 + L1ME1 LINE L1 5509 6290 -1 21 0 0 0 chr2 119449495 119449516 -131238338 + AT_rich Low_complexity Low_complexity 1 21 0 670 258 40 0 chr2 119449797 119449948 -131237906 - MER20 DNA MER1_type -7 212 56 514 272 0 0 chr2 119449954 119450068 -131237786 + MER81 DNA DNA 1 114 0 202 326 0 0 chr2 119450395 119450484 -131237370 + A-rich Low_complexity Low_complexity 1 89 0 832 138 0 0 chr2 119451579 119451695 -131236159 + FLAM_C SINE Alu 1 116 -17 243 0 0 0 chr2 119451701 119451728 -131236126 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 648 171 360 0 chr2 119451966 119452130 -131235724 - MER58A DNA MER1_type 0 224 2 372 236 55 36 chr2 119452797 119452907 -131234947 - MIR SINE MIR -123 139 28 1240 168 14 0 chr2 119453673 119453887 -131233967 + MER20 DNA MER1_type 3 219 0 284 268 181 60 chr2 119454126 119454391 -131233463 - L2 LINE L2 -2 3311 3015 347 297 70 14 chr2 119455293 119455431 -131232423 + MIR SINE MIR 6 148 -63 228 207 0 35 chr2 119455977 119456035 -131231819 + MARNA DNA Mariner 43 98 -488 266 265 49 29 chr2 119456108 119456210 -131231644 - L2 LINE L2 0 3313 3210 197 235 0 0 chr2 119457492 119457526 -131230328 + L2 LINE L2 3258 3291 -22 23 33 0 0 chr2 119458597 119458627 -131229227 + AT_rich Low_complexity Low_complexity 1 30 0 239 293 73 0 chr2 119460059 119460141 -131227713 - L2 LINE L2 0 3272 3185 193 171 0 0 chr2 119460443 119460478 -131227376 - MIR SINE MIR -111 151 117 1111 15 8 0 chr2 119460679 119460809 -131227045 + L1PA2 LINE L1 6025 6155 0 227 195 247 0 chr2 119461508 119461585 -131226269 + MER5B DNA MER1_type 21 116 -62 411 306 136 32 chr2 119464482 119464982 -131222872 + L2 LINE L2 1603 2154 -1160 195 261 46 31 chr2 119465236 119465301 -131222553 + L2 LINE L2 2442 2507 -807 227 182 0 0 chr2 119466726 119466759 -131221095 - MER3 DNA MER1_type 0 209 177 * 340 198 58 35 chr2 119466732 119466818 -131221036 - MER3 DNA MER1_type -121 88 1 676 219 207 0 chr2 119467242 119467411 -131220443 + MER58A DNA MER1_type 15 218 -6 2606 50 0 3 chr2 119469956 119470256 -131217598 - AluY SINE Alu -12 299 1 269 216 124 31 chr2 119471797 119471894 -131215960 + L1MC/D LINE L1 5780 5885 -1923 22 35 0 0 chr2 119471961 119471990 -131215864 + AT_rich Low_complexity Low_complexity 1 29 0 215 233 349 0 chr2 119473091 119473177 -131214677 + MIR SINE MIR 28 143 -119 188 273 273 0 chr2 119474718 119474795 -131213059 - MIR SINE MIR -59 203 106 459 361 43 10 chr2 119474857 119475065 -131212789 - MIR SINE MIR -11 251 37 885 191 0 0 chr2 119475803 119475955 -131211899 + MLT1A1 LTR MaLR 1 152 -213 1012 206 9 23 chr2 119475956 119476174 -131211680 + AluJo SINE Alu 86 300 -12 806 204 177 5 chr2 119476174 119476360 -131211494 + MLT1A1 LTR MaLR 148 365 0 2649 92 24 16 chr2 119476969 119477339 -131210515 + THE1C LTR MaLR 1 373 -2 406 159 57 23 chr2 119477339 119477427 -131210427 + MIR SINE MIR 124 214 -48 289 279 0 0 chr2 119477746 119477825 -131210029 + L1MC/D LINE L1 5754 5832 -1976 652 265 19 12 chr2 119477829 119477991 -131209863 + MIR SINE MIR 52 214 -48 2275 97 3 3 chr2 119479154 119479453 -131208401 - AluSp SINE Alu -14 299 1 402 314 13 26 chr2 119479723 119479876 -131207978 + L2 LINE L2 2604 2754 -560 335 354 101 35 chr2 119479961 119480306 -131207548 + L2 LINE L2 2902 3269 -3 1216 201 27 5 chr2 119480340 119480559 -131207295 - MER58A DNA MER1_type 0 224 1 196 156 0 0 chr2 119480942 119480974 -131206880 - L2 LINE L2 -306 2966 2935 636 188 91 13 chr2 119482984 119483138 -131204716 + Charlie1 DNA MER1_type 40 205 -2556 248 232 41 67 chr2 119483121 119483315 -131204539 + Charlie1 DNA MER1_type 2572 2760 -1 * 198 309 125 79 chr2 119484401 119484553 -131203301 - L3 LINE CR1 -2 1575 1417 2102 135 3 0 chr2 119484624 119484920 -131202934 + AluSx SINE Alu 1 297 -15 21 36 0 0 chr2 119484941 119484969 -131202885 + AT_rich Low_complexity Low_complexity 1 28 0 701 334 31 16 chr2 119485161 119485481 -131202373 + L1MEd LINE L1 446 770 -5349 230 324 182 14 chr2 119485553 119485808 -131202046 - L3 LINE CR1 -262 1315 966 257 233 136 29 chr2 119486427 119486530 -131201324 - L2 LINE L2 -9 3263 3150 220 256 275 19 chr2 119486661 119486821 -131201033 - L2 LINE L2 -1 3312 3112 1879 152 7 14 chr2 119486868 119487165 -131200689 - AluJo SINE Alu -17 295 1 27 49 0 0 chr2 119488165 119488206 -131199648 + AT_rich Low_complexity Low_complexity 1 41 0 240 281 0 37 chr2 119488702 119488784 -131199070 + MLT1K LTR MaLR 494 572 -16 2210 106 3 3 chr2 119489263 119489555 -131198299 - AluSx SINE Alu -20 292 1 308 284 143 10 chr2 119489888 119490025 -131197829 + MIR SINE MIR 18 171 -65 2022 213 125 32 chr2 119491252 119491788 -131196066 + MLT1E LTR MaLR 3 588 -5 2783 171 119 28 chr2 119491799 119492362 -131195492 + MER90 LTR ERV1 1 614 0 1741 183 0 3 chr2 119493343 119493632 -131194222 + AluJb SINE Alu 1 288 -24 689 284 67 0 chr2 119493785 119493993 -131193861 - MIR SINE MIR -33 229 8 1406 193 26 9 chr2 119494238 119494471 -131193383 + MER8 DNA MER2_type 1 237 -2 749 210 97 25 chr2 119497871 119498109 -131189745 - MER112 DNA MER1_type -1 255 1 255 380 37 6 chr2 119498226 119498389 -131189465 + MIR3 SINE MIR 38 205 -3 825 263 92 4 chr2 119498805 119499033 -131188821 - MIR SINE MIR -2 260 13 1983 42 0 13 chr2 119499197 119499433 -131188421 - AluY SINE Alu -11 300 68 604 317 50 5 chr2 119499495 119499716 -131188138 + MIR SINE MIR 13 243 -19 2064 126 0 31 chr2 119500978 119501296 -131186558 + AluSx SINE Alu 1 308 -4 269 335 40 29 chr2 119502105 119502278 -131185576 + LTR67 LTR ERVL 114 288 -269 2406 186 24 4 chr2 119502935 119503245 -131184609 - L1MB7 LINE L1 -2 6182 5873 356 172 163 69 chr2 119503245 119503448 -131184406 - L1PA3 LINE L1 -280 5875 5654 449 182 0 34 chr2 119503468 119503556 -131184298 + L2 LINE L2 3228 3312 -1 264 200 77 0 chr2 119503931 119503996 -131183858 - MER3 DNA MER1_type 0 2301 2232 661 151 92 0 chr2 119504003 119504122 -131183732 - MER3 DNA MER1_type -87 122 40 310 272 40 9 chr2 119505195 119505306 -131182548 + MER34 LTR ERV1 1 117 -466 * 2088 152 152 2 chr2 119505295 119505715 -131182139 + LTR48B LTR ERV1 151 633 -11 432 0 0 0 chr2 119505893 119505941 -131181913 + (TA)n Simple_repeat Simple_repeat 1 48 0 493 231 96 0 chr2 119507095 119507199 -131180655 + MER45 DNA AcHobo 1 114 -1467 197 33 33 0 chr2 119507394 119507424 -131180430 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr2 119507774 119507802 -131180052 + AT_rich Low_complexity Low_complexity 1 28 0 755 58 0 29 chr2 119508418 119508521 -131179333 - AluY SINE Alu -3 308 209 23 0 0 0 chr2 119509293 119509316 -131178538 + AT_rich Low_complexity Low_complexity 1 23 0 195 303 127 79 chr2 119509432 119509597 -131178257 - MIR SINE MIR -55 207 35 605 265 18 18 chr2 119509783 119509949 -131177905 + MIR3 SINE MIR 37 202 -6 520 276 115 5 chr2 119510097 119510289 -131177565 - MIR SINE MIR -2 260 48 226 83 0 42 chr2 119510359 119510407 -131177447 + (TA)n Simple_repeat Simple_repeat 2 47 0 1750 222 67 50 chr2 119511247 119511770 -131176084 + LTR55 LTR ERV 2 533 -15 352 244 13 0 chr2 119511784 119511862 -131175992 + L2 LINE L2 3235 3313 0 * 366 267 204 23 chr2 119511861 119512037 -131175817 + MIR SINE MIR 34 241 -21 469 250 158 60 chr2 119512746 119513258 -131174596 + L1ME4a LINE L1 5560 6121 0 545 271 47 26 chr2 119513759 119513951 -131173903 + MIR SINE MIR 54 249 -13 1969 153 0 3 chr2 119514506 119514801 -131173053 - AluJb SINE Alu -13 299 6 637 256 84 30 chr2 119514889 119515092 -131172762 + MIR SINE MIR 48 261 -1 2372 61 7 0 chr2 119515377 119515673 -131172181 + AluY SINE Alu 1 298 -13 2196 123 0 0 chr2 119515992 119516294 -131171560 - AluSg SINE Alu -8 302 1 241 316 137 8 chr2 119516766 119516883 -131170971 + MARNA DNA Mariner 74 205 -381 447 265 141 5 chr2 119518007 119518197 -131169657 + MIR SINE MIR 45 260 -2 199 53 26 26 chr2 119518199 119518237 -131169617 + (TTA)n Simple_repeat Simple_repeat 1 38 0 261 263 66 51 chr2 119518856 119518993 -131168861 + MIR SINE MIR 100 238 -24 268 329 0 12 chr2 119519264 119519346 -131168508 - MIR SINE MIR -135 127 47 618 208 203 19 chr2 119521280 119521487 -131166367 - MIR SINE MIR -10 252 8 268 354 79 8 chr2 119521555 119521682 -131166172 + MIR3 SINE MIR 4 139 -69 1265 122 39 10 chr2 119521855 119522060 -131165794 + MER2 DNA MER2_type 1 211 -134 501 308 68 69 chr2 119522317 119522851 -131165003 - L2 LINE L2 -23 3290 2748 1541 206 10 10 chr2 119525018 119525319 -131162535 + AluJo SINE Alu 1 301 -11 313 287 188 11 chr2 119526354 119526535 -131161319 + MIR SINE MIR 47 259 -3 1022 216 65 46 chr2 119527086 119527410 -131160444 - MER46C DNA MER2_type 0 338 9 1680 161 45 7 chr2 119527744 119528030 -131159824 + AluJb SINE Alu 1 297 -15 312 267 40 0 chr2 119528455 119528556 -131159298 - MIR SINE MIR -61 147 43 352 236 293 7 chr2 119528804 119528944 -131158910 + MIR SINE MIR 77 256 -6 651 208 31 8 chr2 119529268 119529398 -131158456 + MER3 DNA MER1_type 15 147 -62 2187 108 10 0 chr2 119529652 119529959 -131157895 + AluSg SINE Alu 1 310 0 305 300 35 21 chr2 119529959 119530132 -131157722 + MER5A DNA MER1_type 1 174 -4 2058 126 3 0 chr2 119531352 119531638 -131156216 + AluSx SINE Alu 1 287 -25 1906 155 0 13 chr2 119531648 119531957 -131155897 + AluSx SINE Alu 1 305 -7 1989 99 28 68 chr2 119532170 119532365 -131155489 - AluY SINE Alu 0 311 133 183 42 0 0 chr2 119532365 119532389 -131155465 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1989 99 28 68 chr2 119532389 119532517 -131155337 - AluY SINE Alu -178 133 1 22 0 0 0 chr2 119532533 119532555 -131155299 + AT_rich Low_complexity Low_complexity 1 22 0 1026 155 12 0 chr2 119534392 119534553 -131153301 + AluSg/x SINE Alu 135 297 -13 21 0 0 0 chr2 119534727 119534748 -131153106 + AT_rich Low_complexity Low_complexity 1 21 0 243 0 0 0 chr2 119536369 119536396 -131151458 + (CCG)n Simple_repeat Simple_repeat 2 28 0 1672 144 48 4 chr2 119537275 119537546 -131150308 + AluJb SINE Alu 4 286 -26 321 289 0 0 chr2 119537547 119537630 -131150224 + L1MC4 LINE L1 6621 6703 -1339 2346 91 3 0 chr2 119538235 119538531 -131149323 + AluSp SINE Alu 3 299 -14 1893 159 36 0 chr2 119538647 119538949 -131148905 + 7SLRNA srpRNA srpRNA 4 316 -4 2813 137 31 0 chr2 119539237 119539652 -131148202 + MSTA LTR MaLR 1 428 0 2647 45 0 0 chr2 119539703 119540012 -131147842 - AluY SINE Alu -2 309 1 280 344 46 23 chr2 119540056 119540187 -131147667 - MIR SINE MIR -59 149 16 288 53 0 0 chr2 119540187 119540225 -131147629 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 438 216 265 0 chr2 119540252 119540354 -131147500 - MER5B DNA MER1_type 0 178 50 279 188 130 0 chr2 119540917 119540986 -131146868 - MER5B DNA MER1_type -94 84 7 236 263 0 0 chr2 119540992 119541049 -131146805 - L2 LINE L2 -35 3278 3222 859 128 0 0 chr2 119541140 119541257 -131146597 + FLAM_C SINE Alu 5 121 -22 256 108 0 46 chr2 119541259 119541324 -131146530 + (CAA)n Simple_repeat Simple_repeat 2 63 0 359 296 0 0 chr2 119541778 119541876 -131145978 + L1ME LINE L1 5693 5790 -331 186 219 0 0 chr2 119542282 119542323 -131145531 - L2 LINE L2 -9 3304 3264 1647 184 82 15 chr2 119542403 119542745 -131145109 - MLT1A1 LTR MaLR 0 365 1 326 276 90 83 chr2 119542788 119543100 -131144754 + MLT1I LTR MaLR 71 384 -25 1126 196 87 55 chr2 119544082 119544393 -131143461 - MER21B LTR ERV1 -1 862 542 2598 236 80 65 chr2 119544394 119544822 -131143032 - LTR49-int LTR ERV1 -975 3896 3476 2481 51 0 35 chr2 119544822 119545137 -131142717 - AluY SINE Alu -7 304 1 2598 236 80 65 chr2 119545137 119545493 -131142361 - LTR49-int LTR ERV1 -1395 3476 3089 2591 55 0 0 chr2 119545493 119545803 -131142051 + AluY SINE Alu 2 311 0 2598 236 80 65 chr2 119545803 119546093 -131141761 - LTR49-int LTR ERV1 -1782 3089 2805 1135 187 24 66 chr2 119546094 119546383 -131141471 - LTR49-int LTR ERV1 -2015 4316 4040 1605 162 0 64 chr2 119546391 119546503 -131141351 + AluJb SINE Alu 1 119 -193 2338 114 76 18 chr2 119546503 119546846 -131141008 + THE1B LTR MaLR 1 363 -1 1605 162 0 64 chr2 119546846 119547047 -131140807 + AluJb SINE Alu 119 294 -18 377 183 63 18 chr2 119547062 119547163 -131140691 - LTR49-int LTR ERV1 -2339 2597 2509 * 416 216 35 0 chr2 119547154 119547270 -131140584 - LTR49-int LTR ERV1 -6267 1853 1734 259 218 41 109 chr2 119547270 119547417 -131140437 - LTR49-int LTR ERV1 -3474 4063 3927 635 161 161 0 chr2 119547485 119547597 -131140257 - FLAM_A SINE Alu -3 139 10 1179 209 118 61 chr2 119547640 119547955 -131139899 - LTR49-int LTR ERV1 -3021 2818 2523 2313 67 0 0 chr2 119547955 119548262 -131139592 - AluY SINE Alu 0 307 1 1179 209 118 61 chr2 119548262 119548572 -131139282 - LTR49-int LTR ERV1 -3316 2523 1415 2087 115 5 12 chr2 119548607 119549146 -131138708 - MER4A LTR ERV1 0 664 12 1673 181 7 0 chr2 119549153 119549430 -131138424 + AluJo SINE Alu 17 295 -17 422 214 12 144 chr2 119549434 119549588 -131138266 - LTR49-int LTR ERV1 -3682 1189 1097 499 237 19 25 chr2 119549588 119549806 -131138048 - MER34C LTR ERV1 -175 410 161 653 195 20 48 chr2 119549810 119550108 -131137746 - LTR49-int LTR ERV1 -4134 989 666 1756 238 38 78 chr2 119550191 119550829 -131137025 - LTR9 LTR ERV1 0 612 1 3883 145 75 6 chr2 119551094 119551762 -131136092 + MER50 LTR ERV1 1 714 -20 891 160 0 0 chr2 119551769 119551900 -131135954 + FLAM_A SINE Alu 1 131 -2 625 218 19 68 chr2 119552319 119552569 -131135285 - LTR49-int LTR ERV1 -4187 2144 1327 2681 149 34 63 chr2 119552583 119553108 -131134746 - LTR54 LTR ERV1 0 510 1 2124 117 0 3 chr2 119553300 119553598 -131134256 - AluSx SINE Alu -12 300 4 396 281 35 18 chr2 119553668 119553860 -131133994 + L1M4 LINE L1 5665 5867 -311 30 27 0 0 chr2 119554192 119554229 -131133625 + AT_rich Low_complexity Low_complexity 1 37 0 226 308 33 44 chr2 119554530 119554621 -131133233 + L2 LINE L2 3133 3222 -50 474 168 17 8 chr2 119554667 119554786 -131133068 + (TGGA)n Simple_repeat Simple_repeat 3 122 0 763 196 152 19 chr2 119554950 119555108 -131132746 - AluJb SINE Alu 0 312 134 1222 77 0 16 chr2 119555257 119555439 -131132415 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 24 32 0 0 chr2 119556955 119556986 -131130868 + AT_rich Low_complexity Low_complexity 1 31 0 2806 105 16 8 chr2 119556991 119557363 -131130491 - THE1C LTR MaLR 0 375 1 358 184 28 37 chr2 119557365 119557474 -131130380 + HAL1 LINE L1 1039 1146 -1361 917 260 55 12 chr2 119557502 119557829 -131130025 + HAL1 LINE L1 1297 1637 -870 1674 198 7 3 chr2 119557830 119558133 -131129721 - AluJo SINE Alu -8 304 1 3794 126 11 204 chr2 119558150 119558566 -131129288 - L1P LINE L1 -2814 3332 3278 195 42 0 0 chr2 119558566 119558590 -131129264 + (TTTAA)n Simple_repeat Simple_repeat 1 24 0 3794 126 11 204 chr2 119558590 119559324 -131128530 - L1P LINE L1 -2868 3278 2404 427 254 109 72 chr2 119559335 119559611 -131128243 + MLT1J LTR MaLR 13 298 -213 229 344 58 13 chr2 119559860 119560014 -131127840 + L2 LINE L2 583 743 -2571 181 280 53 40 chr2 119560603 119560678 -131127176 + L2 LINE L2 3197 3272 0 666 208 19 7 chr2 119561786 119561940 -131125914 - MER103 DNA DNA -1 165 10 2160 131 120 21 chr2 119562169 119562552 -131125302 - MSTA LTR MaLR -6 422 2 247 119 169 51 chr2 119563042 119563101 -131124753 + MLT1C LTR MaLR 372 437 -30 422 305 89 29 chr2 119563244 119563490 -131124364 - MLT2F LTR ERVL -402 261 1 490 286 73 105 chr2 119563500 119564184 -131123670 - HAL1 LINE L1 -1837 670 9 252 193 0 0 chr2 119564197 119564207 -131123647 + (TA)n Simple_repeat Simple_repeat 1 10 -47 2590 111 6 0 chr2 119564207 119564567 -131123287 - L1PB1 LINE L1 -8 6143 5782 252 193 0 0 chr2 119564567 119564613 -131123241 + (TA)n Simple_repeat Simple_repeat 9 57 0 4182 171 8 1 chr2 119564613 119565929 -131121925 - L1PB1 LINE L1 -360 5791 4467 911 181 208 5 chr2 119566361 119566582 -131121272 + MER45B DNA AcHobo 393 658 -382 506 275 138 56 chr2 119566577 119566846 -131121008 - MLT1K LTR MaLR -26 562 272 * 197 292 90 22 chr2 119567107 119567196 -131120658 + MIR3 SINE MIR 111 205 -3 390 335 195 14 chr2 119567253 119567323 -131120531 + MIR SINE MIR 2 58 -204 4505 191 95 28 chr2 119567323 119568296 -131119558 + MER45B DNA AcHobo 1 1038 -2 390 335 195 14 chr2 119568296 119568446 -131119408 + MIR SINE MIR 58 262 0 1088 127 4 127 chr2 119568497 119568749 -131119105 - AluJb SINE Alu -8 304 84 361 301 183 14 chr2 119570986 119571199 -131116655 + MIR SINE MIR 14 262 0 752 279 41 20 chr2 119571434 119571678 -131116176 - MIR SINE MIR 0 262 14 246 230 223 27 chr2 119572033 119572186 -131115668 - MIR3 SINE MIR -8 200 5 309 279 29 66 chr2 119578675 119578811 -131109043 - MIR SINE MIR -119 143 13 344 331 58 0 chr2 119580818 119580939 -131106915 - L2 LINE L2 0 3313 3186 21 57 0 0 chr2 119581196 119581231 -131106623 + AT_rich Low_complexity Low_complexity 1 35 0 540 68 0 0 chr2 119582540 119582613 -131105241 + (TG)n Simple_repeat Simple_repeat 1 73 0 392 283 72 12 chr2 119582834 119583000 -131104854 - MIR SINE MIR 0 262 87 1074 251 117 0 chr2 119583170 119583521 -131104333 - MLT1H1 LTR MaLR -51 504 113 313 300 58 45 chr2 119583555 119583778 -131104076 + L2 LINE L2 1815 2040 -1274 1001 155 55 6 chr2 119583793 119583974 -131103880 + MER20 DNA MER1_type 30 219 0 238 151 0 57 chr2 119584309 119584362 -131103492 + L2 LINE L2 3264 3313 0 320 313 62 14 chr2 119585149 119585293 -131102561 + L2 LINE L2 3122 3272 0 1252 162 0 21 chr2 119585367 119585601 -131102253 - L1PA15 LINE L1 0 6165 5937 29 28 0 0 chr2 119585723 119585759 -131102095 + AT_rich Low_complexity Low_complexity 1 36 0 552 242 44 124 chr2 119585772 119586045 -131101809 - MIR SINE MIR -7 255 5 417 231 85 23 chr2 119586140 119586270 -131101584 - MIR SINE MIR -17 245 108 304 250 0 0 chr2 119586427 119586487 -131101367 - MIR3 SINE MIR -8 200 141 6444 140 67 9 chr2 119589205 119590369 -131097485 + Tigger3b DNA MER2_type 1 1231 0 869 248 32 5 chr2 119590755 119590973 -131096881 - MER58A DNA MER1_type 0 224 1 367 256 47 8 chr2 119591645 119591774 -131096080 - MER103 DNA DNA -31 135 2 321 348 65 75 chr2 119592599 119592878 -131094976 - L2 LINE L2 -4 3268 2993 429 205 68 12 chr2 119593117 119593278 -131094576 + Charlie7 DNA MER1_type 2440 2609 -3 1716 188 3 3 chr2 119593397 119593684 -131094170 - AluJo SINE Alu -25 287 1 454 235 83 26 chr2 119593695 119593946 -131093908 + HAL1b LINE L1 1191 1348 0 2148 130 0 0 chr2 119594493 119594785 -131093069 + AluSx SINE Alu 1 292 -20 186 343 82 0 chr2 119595120 119595193 -131092661 + L2 LINE L2 3143 3221 -51 2251 147 37 41 chr2 119595271 119595707 -131092147 + Tigger2a DNA MER2_type 1 434 0 412 279 86 7 chr2 119598380 119598520 -131089334 + MIR3 SINE MIR 58 208 0 1867 115 43 0 chr2 119599318 119599596 -131088258 - AluSx SINE Alu -10 302 13 283 256 12 12 chr2 119600530 119600612 -131087242 - MIR SINE MIR -73 135 54 2150 129 0 0 chr2 119601462 119601764 -131086090 + AluSc SINE Alu 1 302 -7 371 261 49 42 chr2 119601983 119602129 -131085725 - MIR3 SINE MIR -82 126 4 411 271 96 18 chr2 119602578 119602744 -131085110 + MLT1G LTR MaLR 11 189 -401 313 336 106 51 chr2 119603209 119603501 -131084353 + L3 LINE CR1 1 308 -1269 990 311 147 67 chr2 119603625 119604496 -131083358 + L3 LINE CR1 562 1502 -75 256 234 99 4 chr2 119604575 119604677 -131083177 - MIR SINE MIR -74 134 26 346 302 156 28 chr2 119606545 119606833 -131081021 + L2 LINE L2 2199 2523 -791 262 381 52 22 chr2 119607003 119607137 -131080717 + L2 LINE L2 3128 3265 -7 269 277 32 75 chr2 119607154 119607248 -131080606 + MIR SINE MIR 13 102 -160 400 279 0 0 chr2 119607272 119607351 -131080503 - MER5B DNA MER1_type -99 79 1 247 184 252 19 chr2 119607357 119607460 -131080394 + MIR SINE MIR 117 243 -19 232 344 76 6 chr2 119607686 119607843 -131080011 + L2 LINE L2 3121 3288 -25 341 303 53 15 chr2 119608320 119608452 -131079402 - MIR3 SINE MIR -28 180 44 2068 107 0 0 chr2 119609630 119609929 -131077925 + AluSg SINE Alu 11 309 0 317 275 94 58 chr2 119613038 119613209 -131074645 + MIR SINE MIR 8 184 -78 22 56 0 0 chr2 119613289 119613325 -131074529 + AT_rich Low_complexity Low_complexity 1 36 0 586 184 84 0 chr2 119614145 119614280 -131073574 + MER20B DNA MER1_type 52 202 -17 562 273 158 0 chr2 119614836 119615045 -131072809 + MIR SINE MIR 9 250 -12 234 0 0 0 chr2 119615122 119615148 -131072706 + (ATG)n Simple_repeat Simple_repeat 3 28 0 189 0 0 0 chr2 119615209 119615230 -131072624 + (GGA)n Simple_repeat Simple_repeat 2 22 0 243 0 0 0 chr2 119615278 119615305 -131072549 + (GGA)n Simple_repeat Simple_repeat 2 28 0 234 0 0 0 chr2 119615341 119615367 -131072487 + (ATG)n Simple_repeat Simple_repeat 3 28 0 207 0 0 0 chr2 119615408 119615431 -131072423 + (ATG)n Simple_repeat Simple_repeat 3 25 0 360 0 0 0 chr2 119615472 119615512 -131072342 + (ATG)n Simple_repeat Simple_repeat 1 40 0 243 0 0 0 chr2 119615563 119615590 -131072264 + (GGA)n Simple_repeat Simple_repeat 2 28 0 261 0 0 0 chr2 119615626 119615655 -131072199 + (ATG)n Simple_repeat Simple_repeat 3 31 0 207 0 0 0 chr2 119615696 119615719 -131072135 + (ATG)n Simple_repeat Simple_repeat 3 25 0 360 0 0 0 chr2 119615760 119615800 -131072054 + (ATG)n Simple_repeat Simple_repeat 1 40 0 216 0 0 0 chr2 119615854 119615878 -131071976 + (GGA)n Simple_repeat Simple_repeat 2 25 0 243 0 0 0 chr2 119615926 119615953 -131071901 + (GGA)n Simple_repeat Simple_repeat 2 28 0 216 0 0 0 chr2 119616126 119616150 -131071704 + (GGA)n Simple_repeat Simple_repeat 2 25 0 297 0 0 0 chr2 119616204 119616237 -131071617 + (GGA)n Simple_repeat Simple_repeat 2 34 0 360 0 0 0 chr2 119616273 119616313 -131071541 + (ATG)n Simple_repeat Simple_repeat 1 40 0 216 0 0 0 chr2 119616367 119616391 -131071463 + (GGA)n Simple_repeat Simple_repeat 2 25 0 315 0 0 0 chr2 119616496 119616531 -131071323 + (ATG)n Simple_repeat Simple_repeat 3 37 0 198 0 0 0 chr2 119616630 119616652 -131071202 + (ATG)n Simple_repeat Simple_repeat 1 22 0 998 225 48 4 chr2 119617591 119617818 -131070036 + MIR SINE MIR 8 244 -18 905 242 33 18 chr2 119619160 119619433 -131068421 - L1ME1 LINE L1 -5 6161 5885 192 343 75 15 chr2 119621158 119621225 -131066629 + MIR3 SINE MIR 9 79 -129 212 236 0 18 chr2 119621394 119621449 -131066405 + (TG)n Simple_repeat Simple_repeat 2 55 0 2312 95 0 3 chr2 119622636 119622940 -131064914 - AluSg SINE Alu -7 303 1 183 42 0 0 chr2 119625332 119625356 -131062498 + (T)n Simple_repeat Simple_repeat 1 24 0 427 321 24 24 chr2 119626812 119626977 -131060877 - MIR3 SINE MIR -6 202 38 2399 84 0 3 chr2 119627307 119627603 -131060251 - AluY SINE Alu -16 295 1 25 0 0 0 chr2 119630861 119630886 -131056968 + AT_rich Low_complexity Low_complexity 1 25 0 1998 143 113 30 chr2 119632408 119632808 -131055046 - Tigger2a DNA MER2_type -1 433 1 526 287 61 32 chr2 119633305 119633692 -131054162 - L1M4c LINE L1 -854 1889 1406 973 179 0 0 chr2 119633693 119633855 -131053999 - MER5B DNA MER1_type -16 162 1 672 284 156 15 chr2 119633885 119634290 -131053564 - L2 LINE L2 -703 2611 2150 2178 102 0 7 chr2 119634311 119634632 -131053222 + AluSc SINE Alu 15 309 0 183 302 42 74 chr2 119634865 119635054 -131052800 - L2 LINE L2 -1938 1376 1194 2285 98 0 0 chr2 119635651 119635946 -131051908 - AluSx SINE Alu -2 310 16 525 296 102 65 chr2 119635971 119636343 -131051511 - HAL1 LINE L1 -1079 1428 1043 339 258 102 16 chr2 119638482 119638687 -131049167 - MLT1J2 LTR MaLR -191 218 1 1630 132 31 78 chr2 119639456 119639775 -131048079 - AluJo SINE Alu -8 304 1 2373 89 3 0 chr2 119640377 119640680 -131047174 + AluSp SINE Alu 1 304 -9 288 294 52 15 chr2 119640784 119640920 -131046934 + MIR SINE MIR 74 214 -48 210 179 0 0 chr2 119641922 119641978 -131045876 + (CA)n Simple_repeat Simple_repeat 1 56 0 357 326 23 39 chr2 119643051 119643180 -131044674 - MIR3 SINE MIR -15 193 67 363 253 35 86 chr2 119643387 119643584 -131044270 - MIR SINE MIR -48 214 33 405 293 160 13 chr2 119644440 119644740 -131043114 - MLT1K LTR MaLR -51 537 194 229 301 14 0 chr2 119644886 119644959 -131042895 + GA-rich Low_complexity Low_complexity 6 79 0 180 316 0 79 chr2 119645219 119645295 -131042559 + L3b LINE CR1 1514 1583 0 207 364 0 0 chr2 119645548 119645614 -131042240 - L3b LINE CR1 -134 1449 1384 532 307 71 9 chr2 119646976 119647188 -131040666 + MIR SINE MIR 36 260 -2 323 271 59 0 chr2 119648472 119648557 -131039297 + L2 LINE L2 3183 3272 0 290 313 133 30 chr2 119648901 119649067 -131038787 + MIR SINE MIR 68 250 -12 204 163 0 23 chr2 119649281 119649324 -131038530 + A-rich Low_complexity Low_complexity 2 43 0 1269 177 0 9 chr2 119649606 119649821 -131038033 - AluJo SINE Alu -13 299 87 231 292 140 64 chr2 119650360 119650531 -131037323 + L2 LINE L2 2871 3054 -218 879 271 16 12 chr2 119650663 119650921 -131036933 + MIR SINE MIR 4 262 0 202 338 44 0 chr2 119650918 119650986 -131036868 + L2 LINE L2 3149 3219 -53 * 342 216 59 39 chr2 119651073 119651175 -131036679 - MIR SINE MIR -50 212 109 261 382 98 14 chr2 119651280 119651555 -131036299 + L2 LINE L2 2948 3245 -27 256 313 48 0 chr2 119652760 119652843 -131035011 + L2 LINE L2 3227 3313 0 308 203 0 40 chr2 119652899 119652973 -131034881 - Charlie8 DNA MER1_type -1000 1417 1347 874 236 41 20 chr2 119653028 119653480 -131034374 - MLT1D LTR MaLR -9 496 5 349 305 26 19 chr2 119653499 119653653 -131034201 - MIR3 SINE MIR -20 188 34 248 258 22 22 chr2 119654385 119654474 -131033380 - L1MC4 LINE L1 -1338 6704 6616 294 245 74 12 chr2 119655051 119655187 -131032667 - Charlie8 DNA MER1_type -2143 274 127 432 271 174 13 chr2 119655611 119655766 -131032088 - MER5A DNA MER1_type 0 189 10 561 308 106 7 chr2 119655776 119656078 -131031776 + MER115 DNA AcHobo 54 385 -308 260 224 60 0 chr2 119656078 119656145 -131031709 + MER5A DNA MER1_type 117 187 -2 226 308 99 22 chr2 119656282 119656373 -131031481 + MIR3 SINE MIR 60 157 -51 439 211 19 0 chr2 119656622 119656726 -131031128 - MER5A DNA MER1_type -83 106 1 385 305 75 5 chr2 119656898 119657085 -131030769 - Charlie8 DNA MER1_type -2132 285 86 501 313 79 14 chr2 119657872 119658086 -131029768 + MIR SINE MIR 35 262 0 8809 231 65 26 chr2 119658394 119658667 -131029187 + L1MD2 LINE L1 20 281 -6472 267 103 0 0 chr2 119658667 119658706 -131029148 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 8809 231 65 26 chr2 119658706 119663374 -131024480 + L1MD2 LINE L1 281 4767 -1986 1873 157 16 3 chr2 119663374 119663679 -131024175 + AluSg SINE Alu 1 309 -1 1796 127 49 22 chr2 119663684 119663768 -131024086 + AluSx SINE Alu 39 119 -193 441 0 0 0 chr2 119663768 119663817 -131024037 + (TTAAA)n Simple_repeat Simple_repeat 1 49 0 1796 127 49 22 chr2 119663817 119663999 -131023855 + AluSx SINE Alu 119 312 0 8809 231 65 26 chr2 119663999 119665249 -131022605 + L1MD2 LINE L1 4770 6750 -3 410 304 75 10 chr2 119665323 119665524 -131022330 - L1ME LINE L1 -307 5814 5601 492 261 56 21 chr2 119665725 119665867 -131021987 + MIR SINE MIR 116 262 0 862 136 0 0 chr2 119666038 119666156 -131021698 + FLAM_C SINE Alu 1 118 -15 282 248 10 10 chr2 119666195 119666296 -131021558 - L1ME LINE L1 -756 5406 5306 2333 74 0 10 chr2 119666315 119666613 -131021241 - AluY SINE Alu -16 295 1 254 179 18 0 chr2 119666661 119666717 -131021137 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 1495 171 4 42 chr2 119666717 119666981 -131020873 - AluJo SINE Alu -25 287 34 21 0 0 0 chr2 119667182 119667203 -131020651 + AT_rich Low_complexity Low_complexity 1 21 0 438 288 128 23 chr2 119667532 119667962 -131019892 - L1ME1 LINE L1 -255 5911 5437 337 290 108 59 chr2 119668338 119668572 -131019282 - L1ME1 LINE L1 -1318 4828 4566 2114 140 24 0 chr2 119668572 119668908 -131018946 + MER2 DNA MER2_type 1 344 0 337 290 108 59 chr2 119668908 119669063 -131018791 - L1ME1 LINE L1 -1580 4566 4420 205 77 77 0 chr2 119670808 119670847 -131017007 + A-rich Low_complexity Low_complexity 2 43 0 243 146 0 0 chr2 119672115 119672156 -131015698 + (T)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr2 119672602 119672624 -131015230 + GC_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 119672842 119672870 -131014984 + GC_rich Low_complexity Low_complexity 1 28 0 2113 118 0 26 chr2 119675264 119675568 -131012286 + AluY SINE Alu 1 296 -15 224 333 40 0 chr2 119677727 119677826 -131010028 - L2 LINE L2 -2 3311 3209 421 275 150 24 chr2 119677845 119678012 -131009842 - MLT1J2 LTR MaLR 0 450 263 237 339 107 3 chr2 119678449 119678759 -131009095 - L2 LINE L2 -452 2862 2521 345 328 142 18 chr2 119678895 119679389 -131008465 - LTR67 LTR ERVL -2 555 1 232 385 29 0 chr2 119680031 119680135 -131007719 - L1MC/D LINE L1 -2231 5577 5471 346 269 74 9 chr2 119680371 119680479 -131007375 + MIR SINE MIR 78 192 -70 394 282 55 0 chr2 119680580 119680743 -131007111 - MIR SINE MIR 0 262 91 256 277 40 20 chr2 119680751 119680852 -131007002 - MIR SINE MIR -111 151 49 238 278 49 62 chr2 119680944 119681106 -131006748 + L2 LINE L2 2897 3056 -216 304 313 12 0 chr2 119681154 119681234 -131006620 + (TG)n Simple_repeat Simple_repeat 2 82 0 208 362 0 0 chr2 119681324 119681393 -131006461 + L2 LINE L2 3244 3312 -1 2859 13 0 0 chr2 119681579 119681886 -131005968 + AluY SINE Alu 1 307 -4 465 19 0 0 chr2 119681946 119682000 -131005854 + (TG)n Simple_repeat Simple_repeat 1 54 0 1666 198 11 0 chr2 119682000 119682278 -131005576 - AluJo SINE Alu -31 281 1 1214 262 102 35 chr2 119682310 119682733 -131005121 - MER77 LTR ERV1 -6 599 149 373 225 34 11 chr2 119682993 119683082 -131004772 + MIR SINE MIR 31 121 -141 203 265 20 0 chr2 119683440 119683489 -131004365 - L2 LINE L2 -213 3059 3010 335 215 35 40 chr2 119683505 119683628 -131004226 + MER5A DNA MER1_type 7 137 -52 209 284 45 23 chr2 119684140 119684228 -131003626 - MIR3 SINE MIR -48 160 71 337 331 41 0 chr2 119685679 119685800 -131002054 + MER91A DNA MER1_type 1 126 -70 183 219 171 61 chr2 119686568 119686650 -131001204 - L2 LINE L2 -841 2473 2383 302 263 77 58 chr2 119686664 119686820 -131001034 - MIR SINE MIR -1 261 103 2059 232 124 11 chr2 119686908 119687463 -131000391 + MLT2F LTR ERVL 1 618 -45 258 242 0 32 chr2 119687469 119687613 -131000241 + (TATATG)n Simple_repeat Simple_repeat 1 139 0 531 45 0 0 chr2 119687615 119687681 -131000173 + (TCTA)n Simple_repeat Simple_repeat 3 68 0 240 132 0 0 chr2 119687682 119687720 -131000134 + MLT2F LTR ERVL 623 660 -3 2419 80 0 13 chr2 119688674 119688987 -130998867 + AluY SINE Alu 1 309 -2 201 282 14 28 chr2 119690307 119690378 -130997476 + MIR SINE MIR 85 154 -108 23 33 0 0 chr2 119690486 119690516 -130997338 + AT_rich Low_complexity Low_complexity 1 30 0 391 191 16 71 chr2 119690946 119691129 -130996725 + (TTATA)n Simple_repeat Simple_repeat 1 173 0 413 278 89 22 chr2 119691177 119691357 -130996497 - MIR SINE MIR -70 192 1 186 143 0 0 chr2 119691449 119691484 -130996370 + (TG)n Simple_repeat Simple_repeat 2 36 0 314 346 39 7 chr2 119695006 119695159 -130992695 + MIR SINE MIR 32 189 -73 2287 90 0 3 chr2 119695920 119696208 -130991646 - AluSg SINE Alu -11 299 13 307 241 120 19 chr2 119696670 119696778 -130991076 - L2 LINE L2 0 3313 3195 290 171 49 12 chr2 119698055 119698219 -130989635 + (TA)n Simple_repeat Simple_repeat 1 170 0 27 62 0 0 chr2 119698219 119698267 -130989587 + AT_rich Low_complexity Low_complexity 1 48 0 366 115 0 0 chr2 119698283 119698335 -130989519 + Charlie1 DNA MER1_type 2708 2759 -2 246 265 96 0 chr2 119699082 119699165 -130988689 - MIR SINE MIR -106 156 66 216 233 22 11 chr2 119699355 119699445 -130988409 + CT-rich Low_complexity Low_complexity 2 92 0 242 226 179 24 chr2 119700894 119700978 -130986876 + MIR SINE MIR 31 127 -135 673 269 137 38 chr2 119700996 119701497 -130986357 + L2 LINE L2 2730 3292 -21 656 249 239 0 chr2 119701780 119701977 -130985877 - MER102a DNA MER1_type 0 330 87 2383 181 42 0 chr2 119701982 119702391 -130985463 + MSTB LTR MaLR 1 426 0 1913 219 57 46 chr2 119702396 119702944 -130984910 - MER68 LTR ERV1 0 562 9 584 226 95 32 chr2 119702973 119703194 -130984660 - L1MC5 LINE L1 -36 7925 7691 261 304 13 0 chr2 119703737 119703816 -130984038 + MIR SINE MIR 74 153 -55 414 260 88 17 chr2 119703823 119704004 -130983850 - L2 LINE L2 -1 3312 3119 241 280 51 122 chr2 119704036 119704250 -130983604 - MIR SINE MIR -16 246 48 999 199 52 39 chr2 119704372 119704658 -130983196 - LTR16A1 LTR ERVL 0 457 168 566 191 18 0 chr2 119705582 119705692 -130982162 - MLT1B LTR MaLR -11 379 268 1305 284 105 27 chr2 119705704 119706570 -130981284 - L1M4 LINE L1 -979 5167 4234 258 250 97 35 chr2 119706602 119706619 -130981235 - L1MA10 LINE L1 -2 6332 6316 2232 222 103 34 chr2 119706619 119707272 -130980582 - L1ME2 LINE L1 -10 6154 5457 901 229 32 28 chr2 119707269 119707487 -130980367 - L1ME1 LINE L1 -14 6152 5934 * 781 226 21 0 chr2 119707485 119707675 -130980179 - L1ME2 LINE L1 -685 5489 5296 * 1332 249 111 31 chr2 119707668 119708282 -130979572 - L1ME2 LINE L1 -1444 4702 4040 232 327 115 43 chr2 119708289 119708708 -130979146 - L1ME2 LINE L1 -2369 3777 3329 315 0 0 0 chr2 119708903 119708938 -130978916 + (TG)n Simple_repeat Simple_repeat 1 35 0 231 36 0 0 chr2 119709083 119709111 -130978743 + (GA)n Simple_repeat Simple_repeat 1 28 0 359 345 122 13 chr2 119709119 119709357 -130978497 + L3 LINE CR1 1229 1492 -85 279 309 0 0 chr2 119709355 119709423 -130978431 - L2 LINE L2 -1 3271 3204 * 267 289 50 0 chr2 119709709 119709814 -130978040 + MIR SINE MIR 30 150 -63 411 236 68 16 chr2 119710319 119710463 -130977391 + MIR SINE MIR 33 184 -64 394 312 141 0 chr2 119711645 119711815 -130976039 + MIR SINE MIR 21 214 -48 2244 184 22 19 chr2 119711920 119712383 -130975471 + MLT1C LTR MaLR 1 464 -3 191 333 68 7 chr2 119713499 119713646 -130974208 + MIR3 SINE MIR 20 175 -33 305 318 106 37 chr2 119713943 119714160 -130973694 + MIR SINE MIR 28 259 -3 26 0 0 0 chr2 119715180 119715206 -130972648 + AT_rich Low_complexity Low_complexity 1 26 0 630 292 34 21 chr2 119715787 119716023 -130971831 + MIR SINE MIR 23 261 -1 543 288 62 11 chr2 119716291 119716468 -130971386 + MIR3 SINE MIR 16 201 -7 277 339 107 28 chr2 119717291 119717468 -130970386 + MIR SINE MIR 29 219 -43 1901 200 75 45 chr2 119718803 119718987 -130968867 - MLT1D LTR MaLR 0 505 328 1838 95 109 18 chr2 119718987 119719270 -130968584 - AluSc SINE Alu 0 309 1 1901 200 75 45 chr2 119719270 119719575 -130968279 - MLT1D LTR MaLR -177 328 1 186 103 0 0 chr2 119719623 119719652 -130968202 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 3732 140 31 23 chr2 119720543 119720801 -130967053 + MER39B LTR ERV1 1 255 -398 2225 110 3 10 chr2 119720801 119721109 -130966745 + AluY SINE Alu 1 306 -5 3732 140 31 23 chr2 119721109 119721498 -130966356 + MER39B LTR ERV1 255 653 0 186 43 0 0 chr2 119722386 119722409 -130965445 + (TC)n Simple_repeat Simple_repeat 2 24 0 1351 187 8 12 chr2 119723077 119723318 -130964536 + AluJb SINE Alu 28 267 -45 201 74 0 0 chr2 119724706 119724733 -130963121 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 228 111 0 0 chr2 119725675 119725711 -130962143 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 408 346 56 22 chr2 119726525 119726756 -130961098 - L2 LINE L2 -18 3295 3057 668 254 24 30 chr2 119727365 119727654 -130960200 + LTR16A LTR ERVL 120 437 -13 21 0 0 0 chr2 119728259 119728280 -130959574 + AT_rich Low_complexity Low_complexity 1 21 0 400 370 20 14 chr2 119729221 119729367 -130958487 + MIR SINE MIR 3 149 -113 470 107 10 97 chr2 119729983 119730086 -130957768 + MER53 DNA DNA 95 188 -1 1141 283 142 15 chr2 119730112 119730913 -130956941 - L2 LINE L2 -94 3219 2309 321 360 53 31 chr2 119730909 119731134 -130956720 - L2 LINE L2 -429 2885 2656 * 7030 61 1 0 chr2 119781191 119782482 -130905372 + L1PA6 LINE L1 4867 6158 0 464 252 104 2 chr2 119782694 119782858 -130904996 + MIR SINE MIR 38 214 -48 21 36 0 0 chr2 119784978 119785006 -130902848 + AT_rich Low_complexity Low_complexity 1 28 0 206 167 24 0 chr2 119785074 119785116 -130902738 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 31004 94 15 11 chr2 119785139 119785709 -130902145 + L1P LINE L1 1 567 -5579 1948 126 0 36 chr2 119785709 119786018 -130901836 + AluY SINE Alu 1 298 -13 31004 94 15 11 chr2 119786018 119790160 -130897694 + L1P LINE L1 567 4735 -1411 254 302 86 29 chr2 119790953 119791092 -130896762 + L2 LINE L2 3167 3313 0 345 337 81 51 chr2 119791889 119792360 -130895494 + L2 LINE L2 2717 3205 -108 1659 273 97 52 chr2 119792432 119794187 -130893667 + L1MCc LINE L1 30 2170 -4952 201 94 0 0 chr2 119794187 119794219 -130893635 + (CA)n Simple_repeat Simple_repeat 1 32 0 1659 273 97 52 chr2 119794219 119794657 -130893197 + L1MCc LINE L1 2170 2587 -4535 1934 220 7 2 chr2 119794691 119795122 -130892732 + L1MB8 LINE L1 5424 5856 -322 980 273 35 17 chr2 119795151 119795573 -130892281 + L1M4 LINE L1 3673 4102 -2044 393 256 58 7 chr2 119795574 119795711 -130892143 + L1M4 LINE L1 4025 4168 -1978 515 213 57 16 chr2 119795723 119795845 -130892009 - MLT1C LTR MaLR 0 467 341 312 392 8 0 chr2 119796111 119796236 -130891618 - MIR3 SINE MIR -36 172 47 341 346 28 33 chr2 119798210 119798392 -130889462 + MIR SINE MIR 3 183 -79 278 140 0 0 chr2 119800391 119800441 -130887413 + L1MA3 LINE L1 6255 6304 -1 1325 291 127 20 chr2 119800579 119801139 -130886715 - MLT1E2 LTR MaLR -6 620 1 335 197 13 26 chr2 119801139 119801214 -130886640 - MLT1J1 LTR MaLR -40 406 333 558 246 162 0 chr2 119801261 119801440 -130886414 - L2 LINE L2 -1341 1973 1766 27 81 0 0 chr2 119801675 119801737 -130886117 + AT_rich Low_complexity Low_complexity 1 62 0 400 364 71 15 chr2 119801951 119802149 -130885705 + MIR SINE MIR 33 241 -21 1153 192 9 9 chr2 119802680 119802894 -130884960 - MER20 DNA MER1_type -1 218 5 186 167 0 0 chr2 119805646 119805682 -130882172 + GA-rich Low_complexity Low_complexity 1 36 0 414 0 0 0 chr2 119806002 119806048 -130881806 + (CA)n Simple_repeat Simple_repeat 1 46 0 1639 171 46 51 chr2 119806809 119807159 -130880695 + MER7A DNA MER2_type 1 346 0 304 296 114 0 chr2 119807827 119807959 -130879895 - MIR SINE MIR -9 253 107 328 259 123 25 chr2 119807984 119808146 -130879708 + MER96B DNA MER1_type? 2 179 -238 1393 158 91 44 chr2 119808802 119809100 -130878754 - AluJo SINE Alu 0 312 1 404 216 31 10 chr2 119809333 119809430 -130878424 + MIR SINE MIR 102 200 -62 209 265 182 38 chr2 119809576 119809708 -130878146 - MIR SINE MIR 0 262 112 556 265 24 12 chr2 119810681 119810851 -130877003 - MER117 DNA MER1_type -19 178 7 292 308 37 0 chr2 119810947 119811054 -130876800 + MIR SINE MIR 75 185 -77 23 0 0 0 chr2 119811060 119811083 -130876771 + AT_rich Low_complexity Low_complexity 1 23 0 768 188 0 0 chr2 119811083 119811211 -130876643 - FLAM_C SINE Alu -5 128 1 1626 189 14 17 chr2 119811688 119811979 -130875875 - AluJo SINE Alu -22 290 1 258 211 237 9 chr2 119812048 119812162 -130875692 - LTR33 LTR ERVL 0 521 382 264 192 0 19 chr2 119812203 119812255 -130875599 + MER106B DNA MER1_type 1 51 -1008 535 281 112 30 chr2 119812421 119812688 -130875166 - LTR33 LTR ERVL -227 294 6 599 313 162 26 chr2 119812715 119813184 -130874670 + L2 LINE L2 2771 3313 0 791 244 57 39 chr2 119813204 119813433 -130874421 + MIR SINE MIR 18 250 -12 275 212 0 161 chr2 119815872 119816009 -130871845 + MER112 DNA MER1_type 1 115 -145 21 36 0 0 chr2 119816054 119816082 -130871772 + AT_rich Low_complexity Low_complexity 1 28 0 203 169 17 85 chr2 119816180 119816239 -130871615 + CT-rich Low_complexity Low_complexity 3 57 0 505 273 95 23 chr2 119816350 119816695 -130871159 - L1ME LINE L1 -536 5626 5257 283 357 49 0 chr2 119816869 119817135 -130870719 - L1ME LINE L1 -1319 4827 4549 305 294 79 40 chr2 119817149 119817377 -130870477 - L1ME LINE L1 -1625 4521 4285 1206 232 32 51 chr2 119817463 119818562 -130869292 - L1ME LINE L1 -438 5711 4554 * 1240 194 23 23 chr2 119818559 119818858 -130868996 + L1ME1 LINE L1 5696 5994 -172 352 227 23 23 chr2 119819088 119819216 -130868638 + L1MA9 LINE L1 6175 6302 -10 297 233 0 0 chr2 119819391 119819481 -130868373 + CT-rich Low_complexity Low_complexity 3 92 0 1000 80 0 0 chr2 119819529 119819667 -130868187 - AluY SINE Alu 0 311 174 829 58 0 108 chr2 119819683 119819822 -130868032 - AluYb8 SINE Alu -115 203 80 456 360 62 28 chr2 119819829 119820295 -130867559 - L1ME LINE L1 -2191 3938 3457 318 237 21 0 chr2 119820537 119820634 -130867220 + (TA)n Simple_repeat Simple_repeat 2 100 0 483 283 91 39 chr2 119820671 119820967 -130866887 - L1ME LINE L1 -2817 3312 3002 243 251 60 55 chr2 119820972 119821155 -130866699 - L1ME LINE L1 -5035 1084 901 371 326 81 21 chr2 119821182 119821663 -130866191 - L1MEc LINE L1 -4771 1625 1116 27 49 0 0 chr2 119822686 119822727 -130865127 + AT_rich Low_complexity Low_complexity 1 41 0 23944 105 12 44 chr2 119824050 119830461 -130857393 - L1PA7 LINE L1 -1 6153 9 441 297 55 0 chr2 119831148 119831276 -130856578 - L2 LINE L2 -1 3271 3137 394 324 85 8 chr2 119831924 119832147 -130855707 - MIR SINE MIR -6 256 19 21 57 0 0 chr2 119832516 119832551 -130855303 + AT_rich Low_complexity Low_complexity 1 35 0 210 340 56 19 chr2 119832789 119832951 -130854903 - L2 LINE L2 -301 2971 2804 454 197 33 33 chr2 119833795 119833917 -130853937 + MER53 DNA DNA 1 122 -67 267 378 47 0 chr2 119833954 119834081 -130853773 - L2 LINE L2 -14 3258 3126 360 347 50 40 chr2 119834153 119834476 -130853378 + L1MC4a LINE L1 3693 4018 -2128 360 0 0 0 chr2 119834539 119834579 -130853275 + (TG)n Simple_repeat Simple_repeat 2 41 0 236 336 89 0 chr2 119834584 119834730 -130853124 + L1MC4a LINE L1 4015 4173 -1973 34 24 0 0 chr2 119834744 119834785 -130853069 + AT_rich Low_complexity Low_complexity 1 41 0 870 240 0 0 chr2 119835554 119835725 -130852129 + FAM SINE Alu 1 171 -4 719 280 32 94 chr2 119835945 119836381 -130851473 + L1MC4a LINE L1 5445 5853 -1955 268 308 123 0 chr2 119837809 119837939 -130849915 + MIR SINE MIR 117 262 0 843 247 22 9 chr2 119837974 119838197 -130849657 + MIR SINE MIR 28 253 -9 4351 144 77 4 chr2 119838226 119838559 -130849295 - L1PA16 LINE L1 0 6166 5859 216 0 0 0 chr2 119838559 119838583 -130849271 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4351 144 77 4 chr2 119838583 119839013 -130848841 - L1PA16 LINE L1 -307 5859 5347 291 28 0 0 chr2 119839213 119839249 -130848605 + (CA)n Simple_repeat Simple_repeat 1 36 0 212 0 0 35 chr2 119839757 119839786 -130848068 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 1621 203 35 9 chr2 119839786 119840101 -130847753 + MER2 DNA MER2_type 16 338 -7 398 250 10 0 chr2 119840541 119840641 -130847213 - MIR SINE MIR -61 201 101 1397 136 5 5 chr2 119840651 119840865 -130846989 - AluSg/x SINE Alu -13 299 86 353 25 0 0 chr2 119840865 119840905 -130846949 + AluY SINE Alu 13 52 -250 332 254 154 0 chr2 119840986 119841096 -130846758 + MIR SINE MIR 117 243 -19 239 197 165 71 chr2 119841682 119841809 -130846045 + L2 LINE L2 3174 3312 -1 184 359 60 34 chr2 119842086 119842203 -130845651 + L2 LINE L2 3193 3312 -1 317 283 59 27 chr2 119842266 119842485 -130845369 + L1ME4a LINE L1 5717 5942 -179 222 317 10 19 chr2 119843090 119843194 -130844660 + CT-rich Low_complexity Low_complexity 2 104 0 2511 35 7 0 chr2 119844020 119844307 -130843547 + AluY SINE Alu 18 306 -5 26 30 0 0 chr2 119844494 119844527 -130843327 + AT_rich Low_complexity Low_complexity 1 33 0 201 333 129 30 chr2 119844639 119844771 -130843083 - MIR3 SINE MIR -55 153 9 2225 101 10 0 chr2 119844947 119845244 -130842610 - AluSq SINE Alu -13 300 1 294 239 57 11 chr2 119845782 119845870 -130841984 - MIR SINE MIR -68 140 49 374 204 45 11 chr2 119845964 119846052 -130841802 + MIR SINE MIR 153 243 -19 348 299 31 8 chr2 119847053 119847180 -130840674 - MIR SINE MIR 0 262 133 402 21 0 0 chr2 119849611 119849658 -130838196 + (TG)n Simple_repeat Simple_repeat 2 48 0 2116 90 14 0 chr2 119850620 119850898 -130836956 - AluSp SINE Alu -11 302 21 1015 195 31 20 chr2 119851026 119851221 -130836633 + MER2 DNA MER2_type 4 200 -145 708 196 36 0 chr2 119851348 119851486 -130836368 + MER2 DNA MER2_type 203 345 0 22 0 0 0 chr2 119851786 119851808 -130836046 + AT_rich Low_complexity Low_complexity 1 22 0 548 226 32 0 chr2 119852810 119852934 -130834920 + L2 LINE L2 3186 3313 0 25 0 0 0 chr2 119853419 119853444 -130834410 + AT_rich Low_complexity Low_complexity 1 25 0 234 175 28 63 chr2 119853742 119853885 -130833969 + (TAA)n Simple_repeat Simple_repeat 3 140 0 22 0 0 0 chr2 119854893 119854915 -130832939 + AT_rich Low_complexity Low_complexity 1 22 0 1591 163 16 8 chr2 119855240 119855534 -130832320 - AluJo SINE Alu 0 317 22 1243 277 92 48 chr2 119856309 119856873 -130830981 + MLT1G1 LTR MaLR 1 589 -6 270 307 69 0 chr2 119857550 119857651 -130830203 + L2 LINE L2 3145 3252 -20 2214 89 18 0 chr2 119857835 119858117 -130829737 + AluSc SINE Alu 1 287 -22 984 242 40 55 chr2 119858117 119858401 -130829453 - MER93a LTR ERV1 -8 394 114 185 0 0 39 chr2 119858401 119858427 -130829427 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 984 242 40 55 chr2 119858427 119858468 -130829386 - MER93a LTR ERV1 -288 114 74 5569 16 0 0 chr2 119858688 119859317 -130828537 - L1P1 LINE L1 -1444 4702 4074 * 6055 28 0 1 chr2 119859313 119860418 -130827436 + L1P1 LINE L1 4678 5781 -374 231 114 0 0 chr2 119860531 119860566 -130827288 + (A)n Simple_repeat Simple_repeat 1 35 0 592 233 108 23 chr2 119860642 119860818 -130827036 - MIR SINE MIR -58 204 14 2175 112 20 0 chr2 119861091 119861385 -130826469 + AluSx SINE Alu 1 300 -12 256 103 0 0 chr2 119862162 119862201 -130825653 - L1MA8 LINE L1 -33 6258 6220 * 1261 164 18 0 chr2 119862194 119862414 -130825440 + L1MA8 LINE L1 5932 6155 -136 948 203 0 0 chr2 119862415 119862573 -130825281 + AluJo SINE Alu 125 282 -30 188 83 0 28 chr2 119862576 119862612 -130825242 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 401 56 19 0 chr2 119862613 119862667 -130825187 + L1MA8 LINE L1 6163 6217 -74 448 241 102 15 chr2 119864958 119865095 -130822759 + MER5B DNA MER1_type 27 175 -3 21 0 0 0 chr2 119865371 119865392 -130822462 + AT_rich Low_complexity Low_complexity 1 21 0 3293 183 16 10 chr2 119866089 119866707 -130821147 - LTR26E LTR ERV1 0 622 1 21 0 0 0 chr2 119867458 119867479 -130820375 + AT_rich Low_complexity Low_complexity 1 21 0 205 289 218 21 chr2 119868500 119868642 -130819212 + MER5B DNA MER1_type 4 173 -5 451 271 0 35 chr2 119869562 119869706 -130818148 + MIR SINE MIR 117 255 -7 494 199 108 42 chr2 119870463 119870629 -130817225 - MIR SINE MIR -13 249 73 538 231 160 0 chr2 119872288 119872444 -130815410 - MER5A DNA MER1_type -6 183 3 196 340 22 22 chr2 119872965 119873109 -130814745 - MIR SINE MIR -57 151 7 1960 100 53 37 chr2 119874210 119874553 -130813301 + AluSp SINE Alu 6 353 0 827 98 22 49 chr2 119874556 119874740 -130813114 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 324 276 17 26 chr2 119875482 119875598 -130812256 - L1ME1 LINE L1 -98 6068 5954 666 197 8 0 chr2 119875658 119875790 -130812064 + L1PA16 LINE L1 6034 6166 0 254 347 111 17 chr2 119876145 119876442 -130811412 - L2 LINE L2 -478 2836 2512 417 281 50 38 chr2 119876497 119876580 -130811274 + MIR SINE MIR 77 157 -105 1679 227 41 41 chr2 119876580 119877042 -130810812 + LTR40b LTR ERVL 1 462 0 417 281 50 38 chr2 119877042 119877118 -130810736 + MIR SINE MIR 157 238 -24 420 198 42 0 chr2 119877176 119877272 -130810582 + MIR SINE MIR 32 131 -131 390 91 0 0 chr2 119877562 119877617 -130810237 + (ATG)n Simple_repeat Simple_repeat 2 56 0 211 329 12 0 chr2 119877617 119877702 -130810152 - MIR SINE MIR -10 252 167 270 150 0 0 chr2 119877706 119877746 -130810108 + tRNA-Met-e tRNA tRNA 1 40 -35 1615 183 42 0 chr2 119878316 119878493 -130809361 - AluJo SINE Alu -16 296 101 342 80 0 0 chr2 119878493 119878543 -130809311 + (TG)n Simple_repeat Simple_repeat 2 51 0 1615 183 42 0 chr2 119878543 119878649 -130809205 - AluJo SINE Alu -211 101 1 569 282 71 47 chr2 119878687 119878942 -130808912 - MLT1L LTR MaLR -354 261 1 281 315 120 0 chr2 119879263 119879371 -130808483 - MIR SINE MIR -132 130 10 254 313 88 0 chr2 119879482 119879562 -130808292 - MIR SINE MIR -71 137 51 1814 69 0 0 chr2 119880160 119880378 -130807476 + L1PA8 LINE L1 5953 6170 -2 189 0 0 0 chr2 119880864 119880885 -130806969 + (CAA)n Simple_repeat Simple_repeat 1 21 0 282 345 9 17 chr2 119880906 119881022 -130806832 - MIR3 SINE MIR -4 204 90 4226 175 26 33 chr2 119881023 119881874 -130805980 + L1MB8 LINE L1 5334 6178 0 207 267 0 0 chr2 119882009 119882095 -130805759 + (CA)n Simple_repeat Simple_repeat 1 86 0 277 309 114 30 chr2 119882815 119883016 -130804838 + MLT1L LTR MaLR 335 552 -36 408 271 44 74 chr2 119883879 119884218 -130803636 + L1M4 LINE L1 3868 4196 -1950 273 231 26 13 chr2 119884524 119884602 -130803252 + HsTC2 DNA Tc2 1 79 -1819 26 64 0 0 chr2 119885615 119885662 -130802192 + AT_rich Low_complexity Low_complexity 1 47 0 617 228 29 0 chr2 119885662 119885798 -130802056 - MIR SINE MIR -5 257 118 2356 89 0 0 chr2 119885800 119886093 -130801761 - AluSc SINE Alu -16 293 1 306 255 43 96 chr2 119886395 119886603 -130801251 + L1ME LINE L1 1028 1224 -5160 234 172 58 11 chr2 119886658 119886745 -130801109 + (TA)n Simple_repeat Simple_repeat 2 92 0 482 250 101 19 chr2 119886750 119886958 -130800896 + L1ME LINE L1 1410 1634 -4929 679 194 124 84 chr2 119887016 119887237 -130800617 + L1MC3 LINE L1 6822 7058 -727 387 113 0 0 chr2 119887237 119887299 -130800555 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 679 194 124 84 chr2 119887299 119887350 -130800504 + L1MC3 LINE L1 7058 7105 -680 305 294 0 12 chr2 119887354 119887439 -130800415 + MLT1F1 LTR MaLR 48 131 -436 2748 177 56 14 chr2 119887439 119887997 -130799857 + L1MC3 LINE L1 7205 7785 0 1047 275 107 45 chr2 119887989 119888361 -130799493 + L1ME LINE L1 1618 1965 -4598 * 2455 50 7 0 chr2 119888361 119888659 -130799195 + AluY SINE Alu 1 300 -11 1047 275 107 45 chr2 119888659 119888714 -130799140 + L1ME LINE L1 1965 2015 -4548 1569 194 6 19 chr2 119888714 119889028 -130798826 + AluJo SINE Alu 3 312 0 1047 275 107 45 chr2 119889028 119889560 -130798294 + L1ME LINE L1 2015 2638 -3925 3312 270 65 39 chr2 119889561 119891922 -130795932 + L1ME LINE L1 3013 5584 -798 244 236 0 0 chr2 119891926 119891981 -130795873 + L1ME LINE L1 5819 5873 -533 690 273 94 91 chr2 119892112 119892662 -130795192 - MLT1K LTR MaLR -36 552 1 1933 128 4 0 chr2 119893375 119893682 -130794172 - AluSx SINE Alu 0 317 10 323 295 32 0 chr2 119894695 119894790 -130793064 + L3 LINE CR1 1477 1574 -3 3564 258 35 16 chr2 119895677 119896583 -130791271 + ERVL LTR ERVL 1138 2061 -3703 1497 208 8 64 chr2 119896583 119896958 -130790896 + MLT1A1 LTR MaLR 1 354 -11 11405 203 41 10 chr2 119896958 119899142 -130788712 + ERVL LTR ERVL 2062 4313 -1451 198 237 172 11 chr2 119899143 119899236 -130788618 + MIR SINE MIR 85 192 -70 936 241 39 13 chr2 119899670 119899902 -130787952 - MIR SINE MIR -24 238 1 440 231 170 0 chr2 119900620 119900767 -130787087 + MER5B DNA MER1_type 7 178 0 470 228 97 28 chr2 119901806 119902003 -130785851 - MIR SINE MIR -30 232 28 571 224 56 50 chr2 119903207 119903368 -130784486 - MIR3 SINE MIR -24 184 23 541 326 25 41 chr2 119904668 119905033 -130782821 + L1ME LINE L1 4472 4830 -1316 309 344 40 18 chr2 119905111 119905338 -130782516 + L1ME LINE L1 4932 5163 -983 327 326 66 41 chr2 119905412 119905851 -130782003 + L1ME LINE L1 5313 5762 -359 251 296 11 0 chr2 119905850 119905938 -130781916 + L1ME LINE L1 5925 6013 -344 * 231 323 0 0 chr2 119906029 119906094 -130781760 + (TA)n Simple_repeat Simple_repeat 1 65 0 198 0 0 0 chr2 119906485 119906507 -130781347 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 1086 258 62 21 chr2 119907357 119907729 -130780125 + MER113 DNA MER1_type? 88 474 -47 236 337 40 0 chr2 119909191 119909292 -130778562 + L2 LINE L2 3208 3312 -1 23 0 0 0 chr2 119909620 119909643 -130778211 + AT_rich Low_complexity Low_complexity 1 23 0 819 265 130 56 chr2 119909839 119910469 -130777385 - L1MC4a LINE L1 -1876 5932 5256 968 213 133 9 chr2 119910861 119911072 -130776782 + Charlie1 DNA MER1_type 2 238 -2523 786 134 30 0 chr2 119911059 119911193 -130776661 + Charlie1 DNA MER1_type 2623 2760 -1 * 2164 106 0 0 chr2 119911226 119911510 -130776344 - AluSg SINE Alu -26 284 1 233 324 55 50 chr2 119912148 119912330 -130775524 - L3 LINE CR1 -11 1566 1384 1556 221 164 11 chr2 119912485 119912919 -130774935 - MLT1D LTR MaLR -1 504 5 497 231 55 50 chr2 119913009 119913208 -130774646 + Charlie8 DNA MER1_type 103 1389 -1028 618 261 31 12 chr2 119913350 119913511 -130774343 - MIR3 SINE MIR -21 187 24 275 260 31 31 chr2 119913751 119913847 -130774007 + L2 LINE L2 3218 3313 0 361 272 87 51 chr2 119914035 119914230 -130773624 - MLT1J LTR MaLR 0 511 310 341 296 77 55 chr2 119914231 119914826 -130773028 - L1ME LINE L1 -4954 1126 530 2191 129 74 34 chr2 119915545 119915895 -130771959 + THE1B LTR MaLR 1 364 0 12645 88 1 14 chr2 119915895 119917496 -130770358 + THE1B-int LTR MaLR 1 1580 0 2413 114 50 34 chr2 119917496 119917854 -130770000 + THE1B LTR MaLR 1 364 0 606 328 40 17 chr2 119917962 119918264 -130769590 - MLT1J LTR MaLR -200 311 3 23 68 0 0 chr2 119918372 119918416 -130769438 + AT_rich Low_complexity Low_complexity 1 44 0 410 295 36 22 chr2 119918770 119918909 -130768945 + MIR SINE MIR 52 192 -70 195 100 0 0 chr2 119919355 119919385 -130768469 + (TG)n Simple_repeat Simple_repeat 1 30 0 183 42 0 0 chr2 119921189 119921213 -130766641 + (TTA)n Simple_repeat Simple_repeat 1 24 0 25 0 0 0 chr2 119925255 119925280 -130762574 + AT_rich Low_complexity Low_complexity 1 25 0 180 125 0 0 chr2 119925343 119925375 -130762479 + (TCC)n Simple_repeat Simple_repeat 3 34 0 203 156 0 0 chr2 119926187 119926219 -130761635 + GA-rich Low_complexity Low_complexity 5 36 0 470 383 11 6 chr2 119926297 119926472 -130761382 + MER91A DNA MER1_type 3 178 -18 1966 98 102 149 chr2 119928423 119928872 -130758982 + MSTA LTR MaLR 1 428 0 388 264 0 31 chr2 119929372 119929501 -130758353 - L2 LINE L2 0 3313 3189 419 337 21 16 chr2 119929591 119929784 -130758070 - L3 LINE CR1 -248 1329 1136 255 273 0 57 chr2 119930696 119930784 -130757070 + MIR SINE MIR 60 143 -65 3143 171 76 42 chr2 119931368 119932039 -130755815 - LTR8A LTR ERV1 0 727 34 1129 284 61 14 chr2 119932301 119932744 -130755110 + LTR16B LTR ERVL 1 464 0 417 300 17 33 chr2 119933369 119933492 -130754362 + L1MC4 LINE L1 6467 6588 -1454 3462 116 65 39 chr2 119933492 119934088 -130753766 + LTR9 LTR ERV1 1 612 0 417 300 17 33 chr2 119934088 119934144 -130753710 + L1MC4 LINE L1 6588 6643 -1399 231 88 0 0 chr2 119934152 119934186 -130753668 + (TG)n Simple_repeat Simple_repeat 2 35 0 1474 246 75 29 chr2 119934186 119934283 -130753571 + L1MC4 LINE L1 6758 6849 -1193 2251 68 0 0 chr2 119934283 119934562 -130753292 + AluY SINE Alu 1 279 -32 200 59 29 0 chr2 119934562 119934596 -130753258 + (CAAA)n Simple_repeat Simple_repeat 4 38 0 1474 246 75 29 chr2 119934596 119935216 -130752638 + L1MC4 LINE L1 6848 7708 -334 486 95 0 0 chr2 119935227 119935290 -130752564 + AluJ/FLAM SINE Alu 7 69 -243 364 319 15 0 chr2 119935608 119935743 -130752111 - MER117 DNA MER1_type -27 170 34 310 247 41 10 chr2 119936102 119936199 -130751655 - MER5A DNA MER1_type -80 109 10 788 166 38 6 chr2 119936226 119936383 -130751471 - MER5A DNA MER1_type -5 184 23 666 95 0 0 chr2 119936471 119936566 -130751288 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 4528 92 0 84 chr2 119936716 119937440 -130750414 + MER4A LTR ERV1 2 664 0 299 317 55 18 chr2 119939116 119939280 -130748574 - MIR3 SINE MIR -27 181 12 202 242 141 50 chr2 119939537 119939636 -130748218 - MIR SINE MIR -81 127 20 1152 123 0 12 chr2 119940083 119940253 -130747601 + AluSg/x SINE Alu 145 312 0 503 269 42 30 chr2 119940775 119940951 -130746903 + MIR SINE MIR 9 183 -27 342 0 0 0 chr2 119940982 119941020 -130746834 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 588 315 60 51 chr2 119942290 119942820 -130745034 + MARNA DNA Mariner 43 577 -9 22 56 0 0 chr2 119943063 119943099 -130744755 + AT_rich Low_complexity Low_complexity 1 36 0 246 329 23 0 chr2 119944227 119944336 -130743518 - MIR SINE MIR -63 145 31 785 131 22 0 chr2 119945312 119945449 -130742405 + CT-rich Low_complexity Low_complexity 1 140 0 1486 128 5 0 chr2 119945449 119945660 -130742194 - AluSq SINE Alu -18 295 84 2123 121 14 0 chr2 119945686 119945983 -130741871 + AluSg SINE Alu 1 301 -9 214 304 54 0 chr2 119948459 119948551 -130739303 - L2 LINE L2 -252 3020 2924 236 282 45 64 chr2 119949409 119949611 -130738243 + MIR SINE MIR 9 206 -56 202 219 24 0 chr2 119950319 119950360 -130737494 + GA-rich Low_complexity Low_complexity 3 44 0 313 280 133 0 chr2 119950378 119950528 -130737326 - MIR SINE MIR -32 230 61 844 171 0 0 chr2 119950781 119950910 -130736944 - FLAM_C SINE Alu -14 129 1 354 294 128 11 chr2 119951197 119951384 -130736470 + L2 LINE L2 3097 3305 -8 271 230 170 0 chr2 119951420 119951520 -130736334 + L2 LINE L2 3197 3313 0 265 287 139 0 chr2 119953120 119953242 -130734612 + L2 LINE L2 3129 3267 -5 332 268 18 36 chr2 119953392 119953504 -130734350 + MIR SINE MIR 40 149 -113 222 328 26 35 chr2 119953916 119954032 -130733822 + MIR SINE MIR 6 120 -142 429 252 46 38 chr2 119954502 119954633 -130733221 + L2 LINE L2 3141 3272 0 201 156 0 0 chr2 119954635 119954667 -130733187 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 342 305 70 27 chr2 119954693 119955184 -130732670 + L2 LINE L2 2674 3184 -88 347 287 70 0 chr2 119955620 119955749 -130732105 - L2 LINE L2 -245 3068 2931 306 0 0 0 chr2 119955821 119955855 -130731999 + (CA)n Simple_repeat Simple_repeat 2 35 0 1739 186 5 70 chr2 119955951 119956188 -130731666 - MLT1A1 LTR MaLR 0 365 164 2015 148 0 7 chr2 119956188 119956492 -130731362 - AluSx SINE Alu -9 303 2 1739 186 5 70 chr2 119956492 119956647 -130731207 - MLT1A1 LTR MaLR -201 164 1 311 281 11 0 chr2 119957754 119957843 -130730011 + L3b LINE CR1 1168 1257 -326 2339 111 3 0 chr2 119958098 119958404 -130729450 - AluSx SINE Alu -5 307 1 382 252 171 0 chr2 119958830 119958952 -130728902 - MER117 DNA MER1_type -48 149 7 298 43 22 22 chr2 119958952 119958998 -130728856 + MADE1 DNA Mariner 1 46 -34 424 289 63 31 chr2 119959187 119959474 -130728380 - L2 LINE L2 -12 3301 3006 651 275 56 61 chr2 119959732 119959880 -130727974 - L2 LINE L2 -580 2734 2587 2657 138 0 5 chr2 119959880 119960270 -130727584 + MLT1B LTR MaLR 3 390 0 651 275 56 61 chr2 119960270 119960463 -130727391 - L2 LINE L2 -727 2587 2395 286 281 90 30 chr2 119960628 119960795 -130727059 - L3 LINE CR1 -134 1443 1267 3439 143 6 17 chr2 119961193 119961662 -130726192 - MER1A DNA MER1_type -2173 527 63 2077 101 10 17 chr2 119961662 119961958 -130725896 - AluSq SINE Alu -17 296 3 3439 143 6 17 chr2 119961958 119962021 -130725833 - MER1A DNA MER1_type -2637 63 1 467 307 44 38 chr2 119962038 119962357 -130725497 + L1MEd LINE L1 538 858 -5261 23 54 0 0 chr2 119963075 119963112 -130724742 + AT_rich Low_complexity Low_complexity 1 37 0 251 289 0 58 chr2 119963112 119963216 -130724638 + L1ME LINE L1 5726 5823 -298 4434 198 55 27 chr2 119965561 119966612 -130721242 - Tigger6a DNA MER2_type 0 1083 3 31 0 0 0 chr2 119966840 119966871 -130720983 + AT_rich Low_complexity Low_complexity 1 31 0 197 269 23 115 chr2 119966987 119967117 -130720737 - L3 LINE CR1 -1107 470 353 254 339 165 0 chr2 119967497 119967612 -130720242 + MIR SINE MIR 58 191 -71 2006 176 45 8 chr2 119969707 119970083 -130717771 - MLT1B LTR MaLR 0 390 1 225 333 29 10 chr2 119970471 119970573 -130717281 + MIR SINE MIR 89 192 -70 671 220 65 0 chr2 119970665 119970851 -130717003 - L1MA8 LINE L1 -102 6189 5992 1254 248 97 29 chr2 119971316 119971699 -130716155 - MER77 LTR ERV1 -4 601 193 1060 176 106 29 chr2 119971827 119971960 -130715894 + L1MA8 LINE L1 5992 6113 -178 2205 105 10 7 chr2 119971960 119972256 -130715598 - AluSq SINE Alu -16 297 1 1060 176 106 29 chr2 119972256 119972395 -130715459 + L1MA8 LINE L1 6113 6285 -6 1796 147 13 61 chr2 119972524 119972837 -130715017 - AluJb SINE Alu -14 298 1 2646 199 75 75 chr2 119973106 119973401 -130714453 - MER21-int LTR ERV1 -55 4136 3842 198 71 0 0 chr2 119973401 119973429 -130714425 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2646 199 75 75 chr2 119973429 119973442 -130714412 - MER21-int LTR ERV1 -349 3842 3830 720 155 0 17 chr2 119973442 119973558 -130714296 - FLAM_C SINE Alu -19 114 1 2646 199 75 75 chr2 119973558 119974021 -130713833 - MER21-int LTR ERV1 -360 3831 3364 2268 179 65 43 chr2 119974410 119974903 -130712951 + MLT1D LTR MaLR 1 504 -1 477 260 20 7 chr2 119976489 119976639 -130711215 + L2 LINE L2 2926 3077 -236 184 283 0 0 chr2 119976648 119976694 -130711160 + L2 LINE L2 3259 3304 -9 374 259 45 14 chr2 119977189 119977351 -130710503 + LTR43 LTR ERV1 183 472 -207 213 313 10 31 chr2 119977902 119977998 -130709856 - L2 LINE L2 0 3313 3220 494 161 23 0 chr2 119978295 119978382 -130709472 + L1MD3 LINE L1 7883 7971 -24 247 170 64 0 chr2 119978559 119978606 -130709248 + Charlie7 DNA MER1_type 52 101 -2511 * 445 255 60 38 chr2 119978588 119978772 -130709082 + Charlie7 DNA MER1_type 2425 2612 0 354 378 15 20 chr2 119979501 119979697 -130708157 - MIR3 SINE MIR -13 195 1 228 336 82 9 chr2 119980679 119980789 -130707065 + MIR3 SINE MIR 43 160 -48 827 270 120 74 chr2 119981911 119982461 -130705393 + MLT1H1 LTR MaLR 2 550 -5 1011 228 21 4 chr2 119982996 119983234 -130704620 - L1ME1 LINE L1 -223 5943 5709 680 264 97 9 chr2 119984530 119984746 -130703108 + MIR SINE MIR 2 236 -26 391 167 39 13 chr2 119985511 119985589 -130702265 + MER116 DNA Mariner 1 80 0 210 315 41 14 chr2 119985713 119985786 -130702068 - MIR SINE MIR -102 160 86 749 281 10 10 chr2 119988054 119988250 -130699604 + MIR SINE MIR 56 251 -11 223 271 0 0 chr2 119988743 119988802 -130699052 + MIR SINE MIR 95 153 -109 350 256 221 15 chr2 119989970 119990169 -130697685 + L3 LINE CR1 1252 1491 -86 22 0 0 0 chr2 119990456 119990478 -130697376 + AT_rich Low_complexity Low_complexity 1 22 0 323 240 177 0 chr2 119991567 119991663 -130696191 + L2 LINE L2 3201 3313 0 2070 115 0 28 chr2 119993216 119993537 -130694317 + AluSx SINE Alu 1 312 0 212 214 0 0 chr2 119993692 119993734 -130694120 - MIR SINE MIR -106 156 115 180 179 0 0 chr2 119994323 119994362 -130693492 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 216 0 0 0 chr2 119995449 119995473 -130692381 + (A)n Simple_repeat Simple_repeat 1 24 0 680 210 14 14 chr2 119996125 119996263 -130691591 - MLT1C LTR MaLR 0 467 330 3343 113 11 0 chr2 119996284 119996745 -130691109 + Charlie3 DNA MER1_type 35 500 -2210 1948 87 20 0 chr2 119996739 119996991 -130690863 + Charlie3 DNA MER1_type 2242 2498 -212 * 497 143 20 51 chr2 119996988 119997086 -130690768 + Charlie3 DNA MER1_type 2612 2706 -4 * 839 214 107 36 chr2 119997060 119997341 -130690513 - MLT1C LTR MaLR -106 361 61 303 260 92 58 chr2 119997877 119998050 -130689804 - MLT1J LTR MaLR -45 466 288 1808 235 23 3 chr2 119998153 119998717 -130689137 - L1ME2 LINE L1 -179 5987 5220 1640 252 32 7 chr2 119998719 119999183 -130688671 - L1ME2 LINE L1 -1071 5075 4600 832 192 97 100 chr2 119999163 119999512 -130688342 + L1ME LINE L1 4600 4947 -1199 * 385 162 29 0 chr2 119999536 119999604 -130688250 + L1ME LINE L1 5330 5399 -767 859 194 56 11 chr2 119999604 119999784 -130688070 + MLT1B LTR MaLR 1 188 -186 1049 220 0 0 chr2 119999821 120000030 -130687824 + MLT1B LTR MaLR 182 390 0 794 159 40 13 chr2 120000032 120000183 -130687671 + L1ME LINE L1 5397 5551 -615 467 223 36 86 chr2 120000200 120000325 -130687529 + L1MA10 LINE L1 5947 6077 -252 938 233 73 5 chr2 120000325 120000531 -130687323 - MER58A DNA MER1_type -4 220 1 467 223 36 86 chr2 120000531 120000639 -130687215 + L1MA10 LINE L1 6077 6324 -5 213 65 0 0 chr2 120000640 120000671 -130687183 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1877 149 4 0 chr2 120000673 120000949 -130686905 - AluSx SINE Alu -30 282 6 2321 85 7 0 chr2 120000979 120001272 -130686582 - AluY SINE Alu -15 296 2 240 333 89 0 chr2 120001624 120001714 -130686140 + MLT1I LTR MaLR 283 380 -29 446 312 63 113 chr2 120001803 120002165 -130685689 - L2 LINE L2 -19 3253 2910 2209 98 14 7 chr2 120002971 120003268 -130684586 + AluSx SINE Alu 1 299 -13 228 35 0 0 chr2 120003623 120003652 -130684202 + (TG)n Simple_repeat Simple_repeat 2 30 0 217 167 78 0 chr2 120003654 120003756 -130684098 + (TA)n Simple_repeat Simple_repeat 1 110 0 1727 127 8 0 chr2 120004106 120004366 -130683488 + Tigger5 DNA MER2_type 2062 2323 0 195 302 9 113 chr2 120004559 120004665 -130683189 + MIR3 SINE MIR 93 187 -21 292 281 37 0 chr2 120005357 120005439 -130682415 - MIR3 SINE MIR -39 169 85 289 0 0 47 chr2 120005639 120005682 -130682172 + (CCCCG)n Simple_repeat Simple_repeat 4 44 0 279 54 0 0 chr2 120006062 120006099 -130681755 + (TC)n Simple_repeat Simple_repeat 1 37 0 583 372 91 24 chr2 120006387 120006804 -130681050 + L2 LINE L2 2812 3256 -16 399 268 41 69 chr2 120007143 120007341 -130680513 + MIR SINE MIR 11 194 -63 654 296 56 0 chr2 120008417 120008613 -130679241 + MIR SINE MIR 16 222 -40 207 286 8 30 chr2 120008832 120008964 -130678890 + MER5A DNA MER1_type 9 189 0 5938 74 11 0 chr2 120009094 120009852 -130678002 - L1PA8A LINE L1 0 6131 5366 4897 100 3 4 chr2 120009851 120010562 -130677292 + L1PA8A LINE L1 4648 5357 -789 * 195 281 94 16 chr2 120010871 120010935 -130676919 + MER5A DNA MER1_type 6 74 -115 3384 160 52 17 chr2 120010935 120011563 -130676291 + MER51A LTR ERV1 1 640 0 206 260 60 0 chr2 120011578 120011628 -130676226 + MER5A DNA MER1_type 90 142 -47 583 287 153 5 chr2 120011724 120011933 -130675921 + MIR SINE MIR 20 259 -3 635 136 28 193 chr2 120012182 120012395 -130675459 - MER5B DNA MER1_type 0 178 1 256 294 120 22 chr2 120013392 120013576 -130674278 + MLT1L LTR MaLR 4 205 -410 1653 179 0 49 chr2 120013778 120014085 -130673769 + AluJo SINE Alu 1 292 -20 2098 237 118 6 chr2 120014416 120014926 -130672928 - MLT1F1 LTR MaLR 0 567 1 305 253 39 151 chr2 120014930 120015215 -130672639 + L2 LINE L2 3001 3253 -19 193 315 0 14 chr2 120015233 120015306 -130672548 + MIR SINE MIR 61 132 -76 2230 168 62 33 chr2 120015310 120015732 -130672122 - Tigger2a DNA MER2_type 0 434 1 546 279 177 29 chr2 120015832 120016245 -130671609 - MLT1H LTR MaLR 0 549 76 397 236 50 62 chr2 120016304 120016465 -130671389 + MER103 DNA DNA 8 166 0 424 220 61 23 chr2 120017321 120017453 -130670401 - L1ME4a LINE L1 -30 6091 5955 1370 178 23 23 chr2 120017502 120017761 -130670093 + Tigger7 DNA MER2_type 2232 2490 -1 315 0 0 0 chr2 120017765 120017800 -130670054 + (CA)n Simple_repeat Simple_repeat 2 36 0 439 330 85 10 chr2 120017945 120018251 -130669603 - L1ME4a LINE L1 -414 5707 5379 1622 169 27 20 chr2 120018294 120018463 -130669391 - AluJo SINE Alu -15 297 124 263 49 24 0 chr2 120018463 120018504 -130669350 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 1622 169 27 20 chr2 120018504 120018629 -130669225 - AluJo SINE Alu -188 124 1 1493 157 58 29 chr2 120018648 120018922 -130668932 - AluJo SINE Alu -9 303 22 320 333 37 0 chr2 120019494 120019683 -130668171 - L1ME4a LINE L1 -1813 4333 4138 310 371 24 14 chr2 120019687 120019897 -130667957 - L1ME4a LINE L1 -2044 4102 3891 25 75 0 0 chr2 120020831 120020884 -130666970 + AT_rich Low_complexity Low_complexity 1 53 0 310 284 21 7 chr2 120021372 120021513 -130666341 - L1ME4a LINE L1 -3732 2414 2272 23 86 0 0 chr2 120021698 120021756 -130666098 + AT_rich Low_complexity Low_complexity 1 58 0 476 149 0 0 chr2 120021815 120021882 -130665972 + Tigger5 DNA MER2_type 2 68 -2255 395 195 26 0 chr2 120021992 120022069 -130665785 - Tigger5 DNA MER2_type -3 2320 2242 674 287 110 56 chr2 120022295 120022741 -130665113 - L2 LINE L2 0 3313 2844 3212 208 82 22 chr2 120022970 120023982 -130663872 + L1MB5 LINE L1 854 1917 -4729 878 169 89 0 chr2 120023980 120024205 -130663649 + L1MA8 LINE L1 6044 6288 -3 * 876 208 78 4 chr2 120024214 120024445 -130663409 + L1MB5 LINE L1 1912 2159 -4487 * 2914 243 49 8 chr2 120024436 120025361 -130662493 + L1MB5 LINE L1 3035 3997 -2647 4465 225 48 22 chr2 120025382 120025516 -130662338 + L1MB5 LINE L1 4220 4349 -2295 1376 201 36 59 chr2 120025516 120025819 -130662035 + AluJo SINE Alu 2 297 -5 4465 225 48 22 chr2 120025819 120026928 -130660926 + L1MB5 LINE L1 4349 5496 -1148 516 216 14 58 chr2 120026939 120027078 -130660776 + MER70B LTR ERVL 30 162 -416 300 208 14 42 chr2 120027126 120027198 -130660656 + MER70A LTR ERVL 149 218 -254 4056 185 47 48 chr2 120027203 120028353 -130659501 + L1MB5 LINE L1 5517 6654 -18 1802 191 104 36 chr2 120028353 120028797 -130659057 - MLT1D LTR MaLR -31 474 1 232 322 8 16 chr2 120028986 120029107 -130658747 - HAL1b LINE L1 -841 507 388 216 301 116 29 chr2 120029308 120029481 -130658373 - L2 LINE L2 -68 3245 3058 809 258 44 22 chr2 120029707 120029936 -130657918 - MIR SINE MIR -21 241 8 313 225 0 0 chr2 120031038 120031109 -130656745 - L2 LINE L2 -1 3312 3242 550 282 33 6 chr2 120031276 120031457 -130656397 + MIR3 SINE MIR 21 206 -2 258 258 0 0 chr2 120032102 120032164 -130655690 + L2 LINE L2 2998 3059 -213 198 143 48 0 chr2 120032259 120032322 -130655532 + (TA)n Simple_repeat Simple_repeat 2 67 0 1303 189 38 35 chr2 120032890 120033208 -130654646 + MER33 DNA MER1_type 4 322 -2 235 241 17 0 chr2 120033549 120033607 -130654247 - Charlie8 DNA MER1_type -999 1418 1360 * 1375 239 38 109 chr2 120033605 120034157 -130653697 - Charlie8 DNA MER1_type -1900 517 5 203 200 0 0 chr2 120034195 120034230 -130653624 + A-rich Low_complexity Low_complexity 1 35 0 243 200 189 21 chr2 120034281 120034376 -130653478 - MIR SINE MIR -70 192 82 311 312 0 32 chr2 120035322 120035447 -130652407 - MIR SINE MIR -50 212 92 434 267 89 69 chr2 120035536 120035780 -130652074 - L1ME4a LINE L1 0 6121 5862 1705 175 7 17 chr2 120035780 120036077 -130651777 - AluSx SINE Alu -18 294 1 434 267 89 69 chr2 120036077 120036282 -130651572 - L1ME4a LINE L1 -259 5862 5663 204 103 0 0 chr2 120036565 120036594 -130651260 + MIR SINE MIR 223 251 -11 240 352 31 19 chr2 120037393 120037555 -130650299 - MIR SINE MIR -56 206 43 315 286 10 10 chr2 120038546 120038644 -130649210 + MIR3 SINE MIR 88 185 -23 291 396 0 0 chr2 120039804 120039910 -130647944 - MIR SINE MIR -62 146 41 409 289 10 0 chr2 120040245 120040349 -130647505 + MIR SINE MIR 47 151 -111 378 231 154 0 chr2 120040547 120040651 -130647203 - L2 LINE L2 0 3313 3194 249 33 0 0 chr2 120043939 120043969 -130643885 + (CTG)n Simple_repeat Simple_repeat 1 30 0 503 325 5 16 chr2 120045243 120045434 -130642420 - MIR3 SINE MIR 0 208 20 6143 74 21 7 chr2 120046511 120047336 -130640518 + L1PA13 LINE L1 5326 6161 -2 267 210 6 148 chr2 120048003 120048065 -130639789 - MIR3 SINE MIR -5 203 176 2180 179 70 11 chr2 120048065 120048506 -130639348 + MLT1C LTR MaLR 1 467 0 267 210 6 148 chr2 120048506 120048605 -130639249 - MIR3 SINE MIR -32 176 65 1761 187 3 10 chr2 120049917 120050217 -130637637 - AluJo SINE Alu -14 298 1 474 245 69 76 chr2 120053032 120053466 -130634388 + LTR33 LTR ERVL 8 519 -2 2147 110 0 3 chr2 120053955 120054279 -130633575 - AluSx SINE Alu 0 323 1 552 283 112 36 chr2 120054588 120054721 -130633133 + MLT1G LTR MaLR 1 123 -467 2280 125 0 0 chr2 120054721 120055024 -130632830 - AluSx SINE Alu -9 303 1 552 283 112 36 chr2 120055024 120055247 -130632607 + MLT1G LTR MaLR 123 384 -206 189 0 0 0 chr2 120055452 120055473 -130632381 + (CTG)n Simple_repeat Simple_repeat 3 23 0 392 264 8 32 chr2 120056386 120056511 -130631343 - MIR SINE MIR -115 147 26 2404 72 0 19 chr2 120056632 120056939 -130630915 + AluY SINE Alu 1 301 -10 614 247 18 18 chr2 120057274 120057440 -130630414 + MIR SINE MIR 96 261 -1 223 262 167 42 chr2 120058453 120058621 -130629233 + MIR SINE MIR 16 204 -58 518 303 46 52 chr2 120059852 120060179 -130627675 - MER102b DNA MER1_type -16 325 1 1737 130 0 0 chr2 120060717 120060956 -130626898 + AluJb SINE Alu 60 298 -14 254 127 18 18 chr2 120060964 120061019 -130626835 - MER5A DNA MER1_type -56 133 79 330 289 10 10 chr2 120061164 120061261 -130626593 + MER5A DNA MER1_type 48 144 -45 197 306 0 0 chr2 120061368 120061430 -130626424 + MIR3 SINE MIR 147 208 0 573 268 23 0 chr2 120061523 120061715 -130626139 + MIR SINE MIR 58 256 -6 436 196 0 49 chr2 120062378 120062480 -130625374 - MER103 DNA DNA -69 97 1 304 267 44 0 chr2 120062600 120062690 -130625164 + MIR SINE MIR 80 173 -89 270 281 66 25 chr2 120062858 120062979 -130624875 + L2 LINE L2 3146 3271 -1 200 200 18 0 chr2 120062980 120063035 -130624819 + GA-rich Low_complexity Low_complexity 1 56 0 441 156 0 0 chr2 120063086 120063163 -130624691 + GA-rich Low_complexity Low_complexity 1 77 0 283 227 76 0 chr2 120063675 120063741 -130624113 + MLT1K LTR MaLR 517 587 -1 305 224 0 12 chr2 120063757 120063842 -130624012 + (TG)n Simple_repeat Simple_repeat 1 84 0 385 343 74 24 chr2 120063983 120064484 -130623370 - L2 LINE L2 -340 2974 2449 309 26 0 0 chr2 120064692 120064730 -130623124 + (CA)n Simple_repeat Simple_repeat 2 39 0 2518 143 24 17 chr2 120066488 120066950 -130620904 - L1MB7 LINE L1 -19 6165 5701 2161 94 0 0 chr2 120066961 120067261 -130620593 - AluSc SINE Alu 0 316 17 274 374 0 19 chr2 120067525 120067632 -130620222 + MIR SINE MIR 34 138 -70 229 170 43 0 chr2 120067746 120067793 -130620061 + (CATA)n Simple_repeat Simple_repeat 2 50 0 1638 202 0 10 chr2 120067860 120068146 -130619708 + AluJb SINE Alu 4 288 -24 941 100 47 0 chr2 120068146 120068316 -130619538 + GA-rich Low_complexity Low_complexity 3 180 0 1638 202 0 10 chr2 120068316 120068336 -130619518 + AluJb SINE Alu 288 307 -5 721 140 5 38 chr2 120068356 120068542 -130619312 + GA-rich Low_complexity Low_complexity 1 180 0 618 173 7 13 chr2 120068642 120068792 -130619062 + GA-rich Low_complexity Low_complexity 3 151 0 1094 93 6 16 chr2 120068802 120068984 -130618870 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 708 89 0 0 chr2 120068985 120069086 -130618768 + (GGAA)n Simple_repeat Simple_repeat 1 101 0 271 320 48 16 chr2 120070094 120070219 -130617635 - MIR SINE MIR -25 237 109 203 189 189 0 chr2 120070324 120070377 -130617477 + L2 LINE L2 3251 3313 0 1802 274 93 11 chr2 120070410 120071202 -130616652 - L1ME4a LINE L1 -25 6096 5241 212 250 0 17 chr2 120072040 120072100 -130615754 - L2 LINE L2 -300 2972 2914 244 226 204 0 chr2 120073371 120073464 -130614390 - HAL1 LINE L1 -1012 1495 1384 367 129 52 17 chr2 120073468 120073584 -130614270 + (TG)n Simple_repeat Simple_repeat 1 120 0 1055 215 96 34 chr2 120073584 120074002 -130613852 - HAL1 LINE L1 -1144 1363 920 758 291 126 43 chr2 120074005 120074496 -130613358 - HAL1 LINE L1 -1625 882 351 7287 41 46 0 chr2 120074530 120075579 -130612275 - L1PA5 LINE L1 -12 6142 5083 9622 40 0 0 chr2 120075579 120076721 -130611133 + L1PA5 LINE L1 3956 5097 -1049 467 257 67 109 chr2 120076735 120077066 -130610788 - HAL1 LINE L1 -2180 327 11 635 216 0 9 chr2 120077184 120077300 -130610554 - FLAM_C SINE Alu -24 119 5 318 26 0 0 chr2 120077990 120078029 -130609825 + (CA)n Simple_repeat Simple_repeat 2 40 0 502 241 10 6 chr2 120078851 120078966 -130608888 - MIR SINE MIR -76 132 22 2643 149 26 0 chr2 120079198 120079615 -130608239 - MSTA LTR MaLR 0 428 1 540 227 22 18 chr2 120079800 120079952 -130607902 + MIR SINE MIR 25 170 -62 6113 114 9 1 chr2 120080637 120081568 -130606286 + L1PA15 LINE L1 5207 6144 -21 301 148 19 0 chr2 120081631 120081685 -130606169 - L2 LINE L2 0 3313 3259 882 241 18 9 chr2 120082086 120082306 -130605548 + MIR SINE MIR 30 251 -11 343 278 17 17 chr2 120082314 120082429 -130605425 - MLT1H1 LTR MaLR -1 554 440 * 1011 288 11 4 chr2 120082428 120082692 -130605162 - MLT1H1 LTR MaLR -280 275 10 2639 185 39 4 chr2 120082864 120083372 -130604482 - MER74A LTR ERVL -32 526 1 363 330 123 17 chr2 120084056 120084405 -130603449 + L2 LINE L2 2432 2817 -497 275 278 222 0 chr2 120084687 120084813 -130603041 + L2 LINE L2 3114 3267 -5 581 138 0 9 chr2 120085110 120085219 -130602635 + (GGGGA)n Simple_repeat Simple_repeat 5 112 0 322 332 50 30 chr2 120085950 120086152 -130601702 - MIR SINE MIR -6 256 51 712 273 71 16 chr2 120086465 120086773 -130601081 + HsTC2 DNA Tc2 49 373 -1525 533 321 56 8 chr2 120086973 120087241 -130600613 + MER102a DNA MER1_type 48 328 -2 860 203 18 79 chr2 120087705 120087932 -130599922 - MER20 DNA MER1_type -1 218 6 2224 214 91 63 chr2 120088050 120088686 -130599168 + MLT1E1 LTR MaLR 1 654 0 214 239 11 11 chr2 120088735 120088823 -130599031 + GA-rich Low_complexity Low_complexity 2 89 0 192 300 0 0 chr2 120088862 120088922 -130598932 - MIR SINE MIR -128 134 75 2501 57 7 0 chr2 120090285 120090584 -130597270 - AluY SINE Alu -10 301 1 216 67 0 0 chr2 120092978 120093008 -130594846 + (GA)n Simple_repeat Simple_repeat 1 30 0 324 70 0 0 chr2 120093407 120093450 -130594404 + (CA)n Simple_repeat Simple_repeat 2 44 0 397 286 59 62 chr2 120094457 120094833 -130593021 + MLT1K LTR MaLR 127 570 -18 491 264 120 24 chr2 120097657 120097862 -130589992 + MIR SINE MIR 34 256 -6 294 29 0 0 chr2 120098469 120098504 -130589350 + (TTG)n Simple_repeat Simple_repeat 2 36 0 200 222 0 0 chr2 120098877 120098913 -130588941 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 222 118 0 0 chr2 120099416 120099450 -130588404 + (GA)n Simple_repeat Simple_repeat 2 35 0 225 330 93 0 chr2 120099835 120099932 -130587922 + MIR SINE MIR 36 141 -121 2081 203 66 33 chr2 120100040 120100524 -130587330 + MLT1D LTR MaLR 3 502 -3 1440 219 286 17 chr2 120100809 120101080 -130586774 + L1MC4 LINE L1 6550 6747 -1061 1871 177 64 3 chr2 120101080 120101424 -130586430 + MLT1A1 LTR MaLR 1 365 0 1440 219 286 17 chr2 120101424 120102056 -130585798 + L1MC4 LINE L1 6747 7563 -245 436 232 168 19 chr2 120102062 120102217 -130585637 - LTR16B LTR ERVL -286 178 1 201 289 0 0 chr2 120102340 120102392 -130585462 + (TA)n Simple_repeat Simple_repeat 1 52 0 384 361 6 24 chr2 120102753 120102922 -130584932 + L2 LINE L2 2593 2758 -556 417 373 48 56 chr2 120103116 120103529 -130584325 + L2 LINE L2 2850 3259 -13 388 220 121 64 chr2 120106192 120106365 -130581489 + MIR SINE MIR 46 228 -34 270 0 0 0 chr2 120106441 120106471 -130581383 + (CA)n Simple_repeat Simple_repeat 2 31 0 2143 203 49 69 chr2 120106498 120107133 -130580721 - MLT1E3 LTR MaLR 0 624 3 189 107 0 0 chr2 120107168 120107196 -130580658 + (GGGA)n Simple_repeat Simple_repeat 4 31 0 428 271 26 117 chr2 120107216 120107706 -130580148 + L1ME4a LINE L1 5585 6029 -92 1893 153 0 37 chr2 120107706 120108027 -130579827 - AluJo SINE Alu -3 309 1 428 271 26 117 chr2 120108027 120108041 -130579813 + L1ME4a LINE L1 6029 6043 -78 2125 123 17 20 chr2 120108054 120108097 -130579757 - L1MB3 LINE L1 0 6183 6141 2020 127 21 52 chr2 120108097 120108484 -130579370 - THE1C LTR MaLR 0 375 1 2125 123 17 20 chr2 120108484 120108798 -130579056 - L1MB3 LINE L1 -42 6141 5827 1317 163 105 23 chr2 120108807 120109064 -130578790 + AluJb SINE Alu 17 294 -18 3038 182 8 6 chr2 120109067 120109682 -130578172 - L1MB3 LINE L1 -393 5790 5175 192 246 53 18 chr2 120110793 120110850 -130577004 + MIR SINE MIR 70 128 -80 388 239 170 32 chr2 120110964 120111152 -130576702 + L2 LINE L2 3094 3307 -6 221 263 92 0 chr2 120111267 120111343 -130576511 + L2 LINE L2 3190 3272 0 379 280 80 0 chr2 120111960 120112110 -130575744 - MIR SINE MIR -52 210 49 874 295 92 25 chr2 120112339 120112787 -130575067 - L2 LINE L2 -3 3310 2833 241 254 15 0 chr2 120112801 120112868 -130574986 + Charlie4 DNA MER1_type 18 85 -1876 799 226 51 45 chr2 120112905 120113097 -130574757 + Charlie4 DNA MER1_type 1645 1841 -120 1331 214 106 18 chr2 120113097 120113438 -130574416 + MLT1A2 LTR MaLR 2 372 -2 799 226 51 45 chr2 120113438 120113559 -130574295 + Charlie4 DNA MER1_type 1841 1960 -1 604 311 58 9 chr2 120113562 120113787 -130574067 - L2 LINE L2 -505 2809 2574 438 199 76 53 chr2 120114508 120114679 -130573175 + MER58B DNA MER1_type 15 189 -152 627 269 0 0 chr2 120114685 120114819 -130573035 - FRAM SINE Alu -23 153 20 806 180 81 12 chr2 120114838 120114999 -130572855 + MER58B DNA MER1_type 170 341 0 341 206 0 0 chr2 120115004 120115067 -130572787 - MER91 DNA MER1_type -77 63 1 392 327 53 38 chr2 120115215 120115481 -130572373 + L2 LINE L2 2999 3268 -4 21 82 0 0 chr2 120115538 120115587 -130572267 + AT_rich Low_complexity Low_complexity 1 49 0 2201 100 0 0 chr2 120115655 120115925 -130571929 + AluSc SINE Alu 15 284 -25 585 281 224 14 chr2 120116098 120116450 -130571404 - MLT1K LTR MaLR -10 578 153 2617 95 3 11 chr2 120116548 120116915 -130570939 - THE1B LTR MaLR 0 364 1 10316 104 11 79 chr2 120116915 120118611 -130569243 - THE1B-int LTR MaLR 0 1580 1 2834 90 0 8 chr2 120118611 120118978 -130568876 - THE1B LTR MaLR 0 364 1 503 280 35 0 chr2 120119670 120119813 -130568041 + MIR SINE MIR 112 259 -3 21 0 0 0 chr2 120121156 120121177 -130566677 + AT_rich Low_complexity Low_complexity 1 21 0 232 208 0 0 chr2 120121332 120121385 -130566469 - MER116 DNA Mariner -27 53 1 479 288 92 28 chr2 120122065 120122391 -130565463 - L1ME4a LINE L1 -158 5963 5617 2294 205 42 13 chr2 120122467 120123009 -130564845 + MER74A LTR ERVL 1 558 0 461 309 84 0 chr2 120123475 120123653 -130564201 + MIR SINE MIR 19 211 -51 687 302 167 15 chr2 120123654 120124055 -130563799 - MLT1K LTR MaLR -2 586 125 1179 254 19 38 chr2 120124263 120124633 -130563221 + L1MC4a LINE L1 5549 5911 -1897 2367 109 0 3 chr2 120125040 120125352 -130562502 + AluSx SINE Alu 1 311 -1 196 267 84 53 chr2 120125377 120125508 -130562346 - L2 LINE L2 -248 3065 2931 632 266 58 48 chr2 120126679 120126991 -130560863 - L1ME4a LINE L1 -197 5924 5610 204 40 0 0 chr2 120128234 120128259 -130559595 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 221 336 19 10 chr2 120129491 120129595 -130558259 - L2 LINE L2 -252 3020 2916 274 282 60 26 chr2 120129808 120129925 -130557929 + MIR SINE MIR 56 176 -86 334 261 0 0 chr2 120130650 120130719 -130557135 - MER81 DNA DNA -44 70 2 395 189 135 0 chr2 120130743 120130854 -130557000 + MIR SINE MIR 55 180 -82 187 182 0 0 chr2 120130853 120130886 -130556968 + L2 LINE L2 3263 3295 -18 * 636 249 35 12 chr2 120131161 120131334 -130556520 - LTR33 LTR ERVL -4 517 341 268 238 33 106 chr2 120131377 120131528 -130556326 - LTR33 LTR ERVL -381 140 1 594 273 64 6 chr2 120131731 120131903 -130555951 - MIR SINE MIR -4 258 77 7421 165 14 11 chr2 120132383 120133758 -130554096 + L1 LINE L1 3410 4789 -1357 3149 93 2 19 chr2 120133763 120134227 -130553627 + L1MA3 LINE L1 5841 6296 -9 2168 101 0 0 chr2 120134252 120134550 -130553304 + AluSc SINE Alu 1 298 -11 412 258 61 30 chr2 120134947 120135079 -130552775 - L3b LINE CR1 -204 1379 1244 250 183 0 127 chr2 120137818 120137889 -130549965 + Cheshire DNA MER1_type 825 886 -1534 328 292 157 6 chr2 120141605 120141783 -130546071 + L2 LINE L2 2584 2788 -526 1940 151 0 10 chr2 120141786 120142091 -130545763 + AluSx SINE Alu 1 302 -10 438 263 110 92 chr2 120142172 120142563 -130545291 + L2 LINE L2 2916 3313 0 429 203 16 16 chr2 120142619 120142742 -130545112 + GA-rich Low_complexity Low_complexity 3 125 0 228 182 212 15 chr2 120142936 120143002 -130544852 - L2 LINE L2 0 3313 3235 370 273 73 9 chr2 120143043 120143153 -130544701 + MIR3 SINE MIR 79 195 -13 21 36 0 0 chr2 120143166 120143194 -130544660 + AT_rich Low_complexity Low_complexity 1 28 0 270 328 17 26 chr2 120143490 120143606 -130544248 - MIR SINE MIR -96 166 52 549 279 144 0 chr2 120144054 120144269 -130543585 + MER102b DNA MER1_type 94 339 -2 380 229 149 11 chr2 120144601 120144752 -130543102 + MER5A DNA MER1_type 4 178 -11 277 250 121 36 chr2 120145300 120145440 -130542414 - L2 LINE L2 -2 3311 3160 1310 224 114 67 chr2 120145622 120145848 -130542006 + MLT1F1 LTR MaLR 2 216 -351 204 40 0 0 chr2 120145848 120145873 -130541981 + (CG)n Simple_repeat Simple_repeat 2 26 0 1310 224 114 67 chr2 120145873 120146170 -130541684 + MLT1F1 LTR MaLR 216 551 -16 1857 144 3 7 chr2 120146179 120146478 -130541376 + AluJo SINE Alu 1 298 -14 661 216 20 14 chr2 120146493 120146641 -130541213 - MIR SINE MIR -90 172 24 284 311 22 0 chr2 120146703 120146793 -130541061 + L2 LINE L2 3176 3267 -5 4977 152 36 47 chr2 120147993 120148958 -130538896 - L1MC2 LINE L1 0 6344 5390 221 274 44 71 chr2 120149781 120149894 -130537960 - MIR SINE MIR -57 205 96 282 197 127 0 chr2 120150095 120150166 -130537688 + MLT1C LTR MaLR 1 80 -387 2022 130 0 10 chr2 120150293 120150600 -130537254 - AluSg SINE Alu -6 304 1 2333 53 30 7 chr2 120150615 120150919 -130536935 - AluY SINE Alu 0 311 1 2511 45 0 3 chr2 120151016 120151328 -130536526 - AluY SINE Alu 0 311 1 2291 166 8 20 chr2 120151378 120151776 -130536078 + MLT1C LTR MaLR 63 455 -12 699 266 144 38 chr2 120151778 120152124 -130535730 - MLT1J1 LTR MaLR -6 440 58 1249 255 39 9 chr2 120152730 120153067 -130534787 + MLT1A1 LTR MaLR 19 365 0 509 273 23 0 chr2 120153472 120153604 -130534250 + L2 LINE L2 3175 3309 -4 261 280 91 38 chr2 120153659 120153791 -130534063 - L2 LINE L2 0 3272 3134 1633 156 0 33 chr2 120153929 120154231 -130533623 - AluJo SINE Alu -10 302 11 640 106 0 0 chr2 120154430 120154515 -130533339 + AluS SINE Alu 2 86 -226 582 329 120 38 chr2 120155914 120156331 -130531523 + L3b LINE CR1 1104 1554 -29 211 414 39 0 chr2 120156709 120156813 -130531041 + MIR SINE MIR 38 145 -63 320 264 143 21 chr2 120157675 120157815 -130530039 + MIR3 SINE MIR 4 160 -48 574 268 35 0 chr2 120157864 120158006 -130529848 + MER117 DNA MER1_type 51 197 0 381 270 0 119 chr2 120158385 120158544 -130529310 + MIR3 SINE MIR 37 176 -32 256 313 153 0 chr2 120159226 120159357 -130528497 - MIR SINE MIR -22 240 90 589 264 104 6 chr2 120160720 120160883 -130526971 - MIR SINE MIR -71 191 13 991 232 42 108 chr2 120161102 120161397 -130526457 - MLT1C LTR MaLR 0 467 154 2001 99 43 0 chr2 120161397 120161679 -130526175 - AluSc SINE Alu -15 294 1 991 232 42 108 chr2 120161679 120161839 -130526015 - MLT1C LTR MaLR -313 154 45 1719 109 98 0 chr2 120161839 120162105 -130525749 + AluSx SINE Alu 17 308 -4 991 232 42 108 chr2 120162105 120162148 -130525706 - MLT1C LTR MaLR -422 45 1 630 312 134 4 chr2 120162393 120162624 -130525230 + MIR SINE MIR 2 262 0 1576 217 67 12 chr2 120163270 120163616 -130524238 + MLT1A1 LTR MaLR 1 365 0 810 254 9 4 chr2 120163643 120163875 -130523979 - L1M4 LINE L1 -1333 4813 4581 234 231 15 62 chr2 120164856 120164921 -130522933 - MER5A DNA MER1_type 0 189 128 362 286 80 10 chr2 120165230 120165429 -130522425 - L2 LINE L2 -233 3039 2827 320 300 55 18 chr2 120165999 120166109 -130521745 - L2 LINE L2 -214 3058 2945 306 257 73 84 chr2 120167559 120167738 -130520116 - MIR3 SINE MIR -31 177 1 232 325 125 0 chr2 120167773 120167893 -130519961 - MIR SINE MIR 0 262 128 329 299 42 28 chr2 120167931 120168075 -130519779 - MIR SINE MIR -53 209 64 189 214 0 0 chr2 120168627 120168669 -130519185 + (CA)n Simple_repeat Simple_repeat 2 43 0 906 215 52 0 chr2 120169071 120169262 -130518592 + MER63A DNA MER1_type 4 204 -6 489 295 122 53 chr2 120169358 120170057 -130517797 + L2 LINE L2 2554 3313 0 310 191 0 29 chr2 120170755 120170823 -130517031 + Charlie7 DNA MER1_type 1479 1544 -1068 1948 177 133 94 chr2 120170832 120171074 -130516780 + Charlie7 DNA MER1_type 1658 1889 -723 2295 48 55 0 chr2 120171074 120171367 -130516487 + AluY SINE Alu 1 309 -2 1948 177 133 94 chr2 120171367 120171911 -130515943 + Charlie7 DNA MER1_type 1889 2475 -137 269 218 68 38 chr2 120171953 120172086 -130515768 + Charlie7 DNA MER1_type 2415 2551 -61 240 231 46 28 chr2 120172457 120172565 -130515289 + MER113 DNA MER1_type? 5 114 -407 199 276 40 66 chr2 120173145 120173221 -130514633 + MIR SINE MIR 33 106 -102 244 410 0 17 chr2 120173718 120173835 -130514019 + MIR3 SINE MIR 78 192 -16 182 341 0 0 chr2 120174045 120174089 -130513765 - L2 LINE L2 -16 3256 3213 638 186 138 135 chr2 120174243 120174554 -130513300 + MER102b DNA MER1_type 1 312 -29 206 261 0 72 chr2 120174800 120174869 -130512985 - MIR SINE MIR -61 147 84 284 314 59 0 chr2 120175521 120175623 -130512231 + MIR SINE MIR 76 183 -79 443 323 50 17 chr2 120178833 120179031 -130508823 - MIR SINE MIR -38 170 16 264 275 0 50 chr2 120179190 120179270 -130508584 - MIR3 SINE MIR -19 189 114 201 163 0 47 chr2 120180714 120180757 -130507097 + G-rich Low_complexity Low_complexity 2 42 0 1163 111 16 5 chr2 120182153 120182343 -130505511 - AluSx SINE Alu 0 312 121 202 111 44 22 chr2 120182343 120182388 -130505466 + T-rich Low_complexity Low_complexity 2 47 0 1106 60 0 0 chr2 120182388 120182521 -130505333 - AluSx SINE Alu -179 133 1 207 69 0 0 chr2 120182632 120182661 -130505193 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 839 225 43 17 chr2 120183113 120183344 -130504510 - MIR SINE MIR 0 262 26 183 186 34 51 chr2 120183749 120183808 -130504046 - L2 LINE L2 -95 3218 3161 183 129 0 0 chr2 120184292 120184323 -130503531 + (TA)n Simple_repeat Simple_repeat 2 32 0 269 313 154 0 chr2 120184325 120184533 -130503321 - L1MC4a LINE L1 -1846 5962 5723 882 313 53 7 chr2 120184836 120185282 -130502572 - L1MC4a LINE L1 -743 5403 5175 448 277 138 0 chr2 120187990 120188149 -130499705 + MIR SINE MIR 76 256 -6 207 279 148 0 chr2 120188291 120188352 -130499502 - L2 LINE L2 -2 3270 3201 412 277 0 0 chr2 120189469 120189581 -130498273 - MIR SINE MIR -69 193 82 416 221 96 10 chr2 120189634 120189738 -130498116 + MIR3 SINE MIR 43 155 -53 181 333 51 79 chr2 120190311 120190488 -130497366 - MER5A DNA MER1_type 0 189 18 189 294 67 25 chr2 120190895 120191014 -130496840 - MIR3 SINE MIR -11 197 74 320 335 129 0 chr2 120192013 120192183 -130495671 + L2 LINE L2 3122 3313 0 380 241 50 25 chr2 120192407 120192557 -130495297 - MIR SINE MIR -62 146 1 222 37 0 0 chr2 120192732 120192759 -130495095 + (CA)n Simple_repeat Simple_repeat 2 28 0 881 97 105 0 chr2 120193303 120193427 -130494427 + AluSq/x SINE Alu 1 137 -176 558 325 43 21 chr2 120193788 120194022 -130493832 + MIR SINE MIR 24 262 0 216 301 41 68 chr2 120194884 120195030 -130492824 - MIR3 SINE MIR -50 158 45 1589 267 13 59 chr2 120195969 120196508 -130491346 - MARNA DNA Mariner -18 568 55 228 175 0 0 chr2 120197647 120197704 -130490150 + L1MD3 LINE L1 7939 7995 0 205 75 25 50 chr2 120198229 120198269 -130489585 + (CAAAAA)n Simple_repeat Simple_repeat 5 43 0 279 0 0 0 chr2 120199183 120199214 -130488640 + (TC)n Simple_repeat Simple_repeat 2 32 0 43 20 0 0 chr2 120200370 120200420 -130487434 + AT_rich Low_complexity Low_complexity 1 50 0 238 343 42 21 chr2 120209502 120209645 -130478209 + MIR SINE MIR 111 256 -6 229 365 10 0 chr2 120211000 120211096 -130476758 + (TG)n Simple_repeat Simple_repeat 2 98 0 181 176 0 0 chr2 120211224 120211258 -130476596 + MIR3 SINE MIR 162 195 -13 240 100 0 0 chr2 120215359 120215399 -130472455 + (TAA)n Simple_repeat Simple_repeat 3 42 0 27 49 0 0 chr2 120215724 120215765 -130472089 + GC_rich Low_complexity Low_complexity 1 41 0 252 103 52 0 chr2 120219351 120219409 -130468445 + (CCG)n Simple_repeat Simple_repeat 1 61 0 32 26 0 0 chr2 120220320 120220359 -130467495 + GC_rich Low_complexity Low_complexity 1 39 0 210 222 0 0 chr2 120220629 120220683 -130467171 + A-rich Low_complexity Low_complexity 1 54 0 279 0 0 0 chr2 120220872 120220903 -130466951 + (T)n Simple_repeat Simple_repeat 1 31 0 27 0 0 0 chr2 120223171 120223198 -130464656 + GC_rich Low_complexity Low_complexity 1 27 0 345 62 0 0 chr2 120224618 120224666 -130463188 + (TG)n Simple_repeat Simple_repeat 1 48 0 228 278 46 28 chr2 120227751 120227859 -130459995 - MIR3 SINE MIR -17 191 82 402 247 96 14 chr2 120229275 120229421 -130458433 + MIR3 SINE MIR 34 191 -17 217 244 13 39 chr2 120231230 120231308 -130456546 + (CAGAGA)n Simple_repeat Simple_repeat 3 78 0 268 241 51 13 chr2 120231463 120231542 -130456312 - MIR SINE MIR -92 170 89 210 91 0 0 chr2 120233303 120233336 -130454518 + (T)n Simple_repeat Simple_repeat 1 33 0 326 243 164 14 chr2 120233896 120234036 -130453818 + MIR SINE MIR 77 237 -25 225 65 0 0 chr2 120235620 120235651 -130452203 + (CA)n Simple_repeat Simple_repeat 2 32 0 191 290 145 36 chr2 120235767 120235905 -130451949 - MIR3 SINE MIR -53 155 3 217 238 0 60 chr2 120236421 120236505 -130451349 + GA-rich Low_complexity Low_complexity 2 80 0 2394 90 0 13 chr2 120236512 120236823 -130451031 - AluSx SINE Alu -1 311 5 709 203 0 22 chr2 120237984 120238122 -130449732 + MER33 DNA MER1_type 15 149 -175 214 310 172 0 chr2 120238713 120238800 -130449054 + MIR3 SINE MIR 82 183 -25 234 232 0 0 chr2 120239056 120239112 -130448742 - MIR SINE MIR -57 205 150 399 194 0 0 chr2 120239326 120239393 -130448461 + AluS SINE Alu 1 67 -236 1938 136 0 52 chr2 120239469 120239778 -130448076 - AluJb SINE Alu -19 293 1 466 302 91 8 chr2 120239816 120240081 -130447773 - L1MC2 LINE L1 -211 5951 5665 517 180 85 8 chr2 120240089 120240246 -130447608 + L1MC2 LINE L1 5948 6053 -291 347 76 108 13 chr2 120240266 120240423 -130447431 + (TA)n Simple_repeat Simple_repeat 1 172 0 236 143 54 36 chr2 120240450 120240618 -130447236 + (TATAA)n Simple_repeat Simple_repeat 5 175 0 204 100 125 0 chr2 120240733 120240853 -130447001 + (TA)n Simple_repeat Simple_repeat 1 135 0 24 67 0 0 chr2 120240855 120240900 -130446954 + AT_rich Low_complexity Low_complexity 1 45 0 448 124 62 6 chr2 120240909 120241070 -130446784 + (TTATA)n Simple_repeat Simple_repeat 5 174 0 519 105 72 33 chr2 120241090 120241435 -130446419 + (TATAA)n Simple_repeat Simple_repeat 1 358 0 2905 169 112 21 chr2 120241475 120242101 -130445753 + L1MC3 LINE L1 7086 7768 -17 814 200 125 20 chr2 120242176 120242376 -130445478 - MER58A DNA MER1_type -3 221 1 996 263 48 45 chr2 120242571 120243012 -130444842 - L1ME3 LINE L1 -787 5359 4918 1799 238 40 29 chr2 120243746 120244296 -130443558 - L1ME3 LINE L1 0 6162 5607 729 231 74 9 chr2 120244335 120244551 -130443303 - L1ME1 LINE L1 -5 6161 5932 407 335 98 24 chr2 120244563 120245061 -130442793 + L2 LINE L2 2221 2755 -559 200 305 34 0 chr2 120245322 120245381 -130442473 + L2 LINE L2 3137 3197 -75 271 271 10 10 chr2 120245546 120245642 -130442212 + L1M4 LINE L1 5187 5282 -864 1035 32 0 0 chr2 120245653 120245778 -130442076 - L1PA4 LINE L1 -3 6152 6028 280 287 96 27 chr2 120245805 120245993 -130441861 - L1ME1 LINE L1 -316 5805 5605 233 338 0 15 chr2 120247031 120247099 -130440755 + MIR SINE MIR 18 84 -124 437 318 7 0 chr2 120248288 120248436 -130439418 + MER46C DNA MER2_type 189 337 -1 317 262 19 19 chr2 120249038 120249145 -130438709 + L2 LINE L2 3203 3309 -4 206 316 60 38 chr2 120249235 120249368 -130438486 - MIR SINE MIR -13 249 114 263 250 15 0 chr2 120249921 120249989 -130437865 + MLT1E1 LTR MaLR 9 77 -577 2433 219 18 31 chr2 120250569 120250823 -130437031 - L1ME2 LINE L1 -15 6149 5893 1454 189 87 22 chr2 120250823 120251146 -130436708 - MER2 DNA MER2_type 0 344 1 2433 219 18 31 chr2 120251146 120251499 -130436355 - L1ME2 LINE L1 -271 5893 5550 2101 149 0 0 chr2 120252572 120252880 -130434974 + AluSq SINE Alu 1 308 -5 216 242 48 0 chr2 120252935 120252997 -130434857 - MER91A DNA MER1_type -129 67 3 440 333 61 5 chr2 120253329 120253527 -130434327 + MIR SINE MIR 2 210 -52 1092 152 22 78 chr2 120254537 120254768 -130433086 + MER20 DNA MER1_type 2 219 0 202 147 0 0 chr2 120255572 120255606 -130432248 + MIR3 SINE MIR 123 156 -52 256 268 41 21 chr2 120255622 120255719 -130432135 + MER94 DNA DNA 2 100 -34 514 229 128 105 chr2 120255949 120256690 -130431164 + LTR41 LTR ERVL 1 758 -15 205 200 0 0 chr2 120256974 120257019 -130430835 + MIR SINE MIR 93 137 -71 676 184 26 0 chr2 120257019 120257133 -130430721 - LTR12 LTR ERV1 -236 478 362 273 213 0 40 chr2 120257133 120257208 -130430646 - LTR30 LTR ERV1 -98 624 553 1101 103 259 0 chr2 120257209 120257394 -130430460 - LTR12 LTR ERV1 -429 285 53 252 250 0 0 chr2 120257394 120257446 -130430408 - LTR30 LTR ERV1 -670 52 1 3904 113 2 0 chr2 120257446 120257984 -130429870 - HERV9 LTR ERV1 0 8399 7861 370 365 7 0 chr2 120258320 120258465 -130429389 - MIR3 SINE MIR -41 167 22 1284 172 23 5 chr2 120258795 120259010 -130428844 + MER20 DNA MER1_type 1 219 0 1741 39 0 0 chr2 120259435 120259640 -130428214 - L1PA4 LINE L1 -2 6153 5949 359 272 65 43 chr2 120260232 120260416 -130427438 - MER5A DNA MER1_type 0 189 2 428 215 54 47 chr2 120260695 120260844 -130427010 + L1ME3A LINE L1 6021 6170 0 964 169 77 0 chr2 120260884 120261091 -130426763 + L1MA4 LINE L1 6075 6297 -3 244 227 15 30 chr2 120261189 120261255 -130426599 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 234 299 23 0 chr2 120261754 120261841 -130426013 - L1MC4 LINE L1 -1340 6702 6614 510 204 20 71 chr2 120261880 120262076 -130425778 + L1ME4a LINE L1 5935 6120 -1 409 294 29 52 chr2 120263283 120263630 -130424224 + HAL1b LINE L1 100 438 -910 243 282 114 49 chr2 120264574 120265231 -130422623 + L1M4 LINE L1 2479 3178 -2968 2070 148 3 0 chr2 120265235 120265539 -130422315 - AluSx SINE Alu -7 305 1 2171 136 0 0 chr2 120265552 120265846 -130422008 - AluSx SINE Alu -18 294 1 351 254 135 70 chr2 120265856 120266041 -130421813 + L1MC5 LINE L1 7711 7907 -54 326 288 131 7 chr2 120266365 120266518 -130421336 + MIR3 SINE MIR 15 186 -22 1964 184 37 0 chr2 120267886 120268260 -130419594 - MLT1B LTR MaLR -2 388 1 345 19 56 0 chr2 120268329 120268383 -130419471 + (TA)n Simple_repeat Simple_repeat 2 58 0 1867 87 4 0 chr2 120268383 120268639 -130419215 - AluSc SINE Alu 0 303 47 43836 32 21 1 chr2 120268875 120274906 -130412948 - L1PA2 LINE L1 0 6155 1 241 246 18 0 chr2 120275130 120275187 -130412667 + CT-rich Low_complexity Low_complexity 4 61 0 1661 201 12 60 chr2 120275255 120275658 -130412196 + MLT1B LTR MaLR 1 384 -6 434 286 49 13 chr2 120276173 120276454 -130411400 + MLT1I LTR MaLR 82 409 0 * 1107 275 122 27 chr2 120276454 120276715 -130411139 - MLT1L LTR MaLR -7 608 373 252 0 0 0 chr2 120276715 120276743 -130411111 + (GA)n Simple_repeat Simple_repeat 2 29 0 1107 275 122 27 chr2 120276743 120276963 -130410891 - MLT1L LTR MaLR -242 373 81 188 280 80 10 chr2 120277261 120277361 -130410493 - MIR SINE MIR -70 138 32 193 267 17 0 chr2 120277790 120277906 -130409948 + (TG)n Simple_repeat Simple_repeat 1 118 0 232 211 58 0 chr2 120278393 120278445 -130409409 - MLT1I LTR MaLR -245 164 110 518 308 88 30 chr2 120278646 120279207 -130408647 - L2 LINE L2 -21 3292 2664 335 245 164 14 chr2 120279780 120279988 -130407866 - MLT1L LTR MaLR 0 615 273 1386 263 55 17 chr2 120279999 120280170 -130407684 - L2 LINE L2 0 3313 3150 2322 159 76 2 chr2 120280170 120280567 -130407287 + MSTB LTR MaLR 1 426 0 1386 263 55 17 chr2 120280567 120280871 -130406983 - L2 LINE L2 -163 3150 2820 212 279 35 23 chr2 120282776 120282862 -130404992 - L2 LINE L2 -5 3267 3181 629 163 7 64 chr2 120282872 120283013 -130404841 - LTR37B LTR ERV1 0 468 336 231 114 0 0 chr2 120283067 120283102 -130404752 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 922 233 52 49 chr2 120283102 120283389 -130404465 - LTR37B LTR ERV1 -180 288 1 392 326 52 17 chr2 120283463 120283635 -130404219 + MIR3 SINE MIR 20 197 -11 684 254 122 54 chr2 120283876 120284230 -130403624 - MLT1I LTR MaLR -6 403 26 458 243 45 0 chr2 120285391 120285502 -130402352 + MIR SINE MIR 68 183 -79 1977 192 23 33 chr2 120285562 120285826 -130402028 - LTR39 LTR ERV1 0 783 518 635 13 25 0 chr2 120285826 120285905 -130401949 + (TTTC)n Simple_repeat Simple_repeat 2 82 0 2150 117 0 0 chr2 120285907 120286190 -130401664 - AluSx SINE Alu -29 283 1 1977 192 23 33 chr2 120286190 120286318 -130401536 - LTR39 LTR ERV1 -266 517 392 2070 181 15 52 chr2 120286355 120286852 -130401002 - LTR39 LTR ERV1 -388 395 1 473 186 0 106 chr2 120287278 120287391 -130400463 + MER94 DNA DNA 5 105 -29 444 303 119 54 chr2 120288738 120289124 -130398730 - L1ME4a LINE L1 -285 5836 5426 2321 98 0 13 chr2 120289257 120289564 -130398290 - AluSg1 SINE Alu -5 304 2 657 307 61 75 chr2 120289774 120290295 -130397559 - L1ME4a LINE L1 -1194 4952 4444 1546 217 0 10 chr2 120290295 120290599 -130397255 - AluJo SINE Alu -11 301 1 657 307 61 75 chr2 120290599 120290846 -130397008 - L1ME4a LINE L1 -1702 4444 4195 282 325 92 44 chr2 120290937 120291143 -130396711 + MLT1K LTR MaLR 21 236 -352 319 309 97 23 chr2 120291245 120291420 -130396434 + MLT1L LTR MaLR 428 615 0 1353 201 24 11 chr2 120291512 120291871 -130395983 + L1M4 LINE L1 4989 5355 -805 1846 244 74 13 chr2 120291876 120292474 -130395380 - L1M4 LINE L1 -1369 4777 4144 652 238 37 11 chr2 120292476 120292665 -130395189 - L1M4 LINE L1 -2078 4068 3875 1030 204 42 0 chr2 120292715 120292906 -130394948 + AluSx SINE Alu 1 199 -113 3472 199 41 21 chr2 120292923 120293782 -130394072 + L1ME1 LINE L1 5188 6161 -5 865 256 69 69 chr2 120293863 120294383 -130393471 + HAL1 LINE L1 1883 2402 -105 17513 119 28 12 chr2 120294457 120296408 -130391446 + Tigger4(Zombi) DNA MER2_type 1 2010 -721 3585 84 23 4 chr2 120296408 120296885 -130390969 + LTR19A LTR ERV1 1 486 0 17513 119 28 12 chr2 120296885 120297620 -130390234 + Tigger4(Zombi) DNA MER2_type 2010 2731 0 753 222 13 7 chr2 120297660 120297813 -130390041 + MIR SINE MIR 36 189 -73 1704 160 14 31 chr2 120297830 120298123 -130389731 - AluJo SINE Alu -24 288 1 25 0 0 0 chr2 120298292 120298317 -130389537 + AT_rich Low_complexity Low_complexity 1 25 0 307 251 159 15 chr2 120298370 120298632 -130389222 - L1MC4a LINE L1 -296 5825 5621 391 261 77 67 chr2 120298905 120299100 -130388754 + MIR SINE MIR 63 259 -3 240 182 55 18 chr2 120300086 120300141 -130387713 - L2 LINE L2 -92 3221 3165 398 223 27 87 chr2 120300537 120300721 -130387133 - LTR67 LTR ERVL -25 532 360 6563 28 0 0 chr2 120301094 120301816 -130386038 - L1PA4 LINE L1 0 6155 5434 653 135 24 16 chr2 120301842 120301968 -130385886 - MSTB LTR MaLR -269 157 31 330 125 0 0 chr2 120302587 120302643 -130385211 - L1MB3 LINE L1 -10 6173 6118 663 204 23 0 chr2 120302652 120302784 -130385070 + MSTA LTR MaLR 210 344 -84 907 178 63 71 chr2 120302990 120303243 -130384611 + MLT1C LTR MaLR 169 419 -48 8240 181 93 89 chr2 120303285 120303764 -130384090 - L1M4 LINE L1 -3177 3205 2729 885 185 117 133 chr2 120303764 120304131 -130383723 - MLT1A1 LTR MaLR -4 361 1 8240 181 93 89 chr2 120304131 120304577 -130383277 - L1M4 LINE L1 -3653 2729 2286 2559 222 48 20 chr2 120304577 120305114 -130382740 + MLT2B3 LTR ERVL 1 552 -2 8240 181 93 89 chr2 120305114 120305132 -130382722 - L1M4 LINE L1 -4096 2286 2270 225 0 0 67 chr2 120305132 120305162 -130382692 - MSTB LTR MaLR -368 28 1 8240 181 93 89 chr2 120305162 120305916 -130381938 - L1M4 LINE L1 -4112 2270 1521 799 187 8 0 chr2 120305916 120306039 -130381815 - FLAM_A SINE Alu -9 124 1 8240 181 93 89 chr2 120306039 120307478 -130380376 - L1M4 LINE L1 -4861 1521 29 5166 255 124 22 chr2 120307489 120308106 -130379748 - L2 LINE L2 -599 2715 2162 2287 103 3 0 chr2 120308106 120308408 -130379446 - AluSp SINE Alu -10 303 1 5166 255 124 22 chr2 120308408 120309574 -130378280 - L2 LINE L2 -1152 2162 751 359 178 188 30 chr2 120309560 120309661 -130378193 + L2 LINE L2 3197 3313 0 * 859 245 56 59 chr2 120310288 120310680 -130377174 - PABL_B LTR ERV1 0 667 277 308 273 144 7 chr2 120311171 120311185 -130376669 - L1MA10 LINE L1 -3 6331 6318 1206 235 125 28 chr2 120311185 120311577 -130376277 - L1ME2 LINE L1 -9 6155 5726 258 274 21 53 chr2 120312474 120312569 -130375285 - MIR SINE MIR -60 202 111 699 160 115 13 chr2 120312630 120312786 -130375068 - MER96B DNA MER1_type? -238 179 8 272 272 0 12 chr2 120312815 120312896 -130374958 - MER116 DNA Mariner 0 80 1 183 261 87 29 chr2 120313181 120313250 -130374604 + MIR SINE MIR 174 246 -16 318 284 57 11 chr2 120313285 120313373 -130374481 - MIR SINE MIR -86 122 31 549 264 103 37 chr2 120314286 120314528 -130373326 - MIR SINE MIR -1 261 4 598 215 65 45 chr2 120314732 120314908 -130372946 - MER5A DNA MER1_type -6 183 4 220 309 83 0 chr2 120316473 120316557 -130371297 - L2 LINE L2 -14 3258 3168 538 185 0 11 chr2 120317205 120317297 -130370557 + AluJo SINE Alu 44 134 -178 335 178 27 0 chr2 120318029 120318102 -130369752 - L1MA8 LINE L1 -11 6280 6206 2344 100 3 0 chr2 120318457 120318768 -130369086 - AluSx SINE Alu 0 312 1 3971 225 28 26 chr2 120319135 120320353 -130367501 - L1MD1 LINE L1 -11 6231 5005 1099 165 0 34 chr2 120320353 120320529 -130367325 - FAM SINE Alu -3 172 3 3971 225 28 26 chr2 120320529 120321140 -130366714 - L1MD1 LINE L1 -1237 5005 4397 3035 125 146 16 chr2 120321141 120321701 -130366153 - LTR10E LTR ERV1 0 633 1 225 0 0 0 chr2 120321858 120321883 -130365971 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2973 237 19 35 chr2 120321885 120322624 -130365230 - BaEV-int LTR ERV1 -758 5891 5165 8056 107 22 2 chr2 120322687 120323867 -130363987 - BaEV-int LTR ERV1 -3887 3009 1806 322 250 167 0 chr2 120323869 120323953 -130363901 + LTR8 LTR ERV1 156 253 -438 5238 105 17 78 chr2 120323955 120325087 -130362767 - LTR10E-int LTR ERV1 -3313 4472 712 527 234 65 93 chr2 120325151 120325554 -130362300 - LTR10E-int LTR ERV1 -5987 662 288 947 220 68 47 chr2 120325562 120325894 -130361960 - LTR10E-int LTR ERV1 -6330 319 3 3033 125 146 16 chr2 120325896 120326456 -130361398 - LTR10E LTR ERV1 0 633 1 410 250 48 0 chr2 120326456 120326601 -130361253 - L1MD1 LINE L1 -1746 4400 4250 14973 199 40 13 chr2 120326612 120330568 -130357286 + L1PB1 LINE L1 6 4354 -2547 189 0 0 0 chr2 120330568 120330589 -130357265 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 14973 199 40 13 chr2 120330589 120333208 -130354646 + L1PB1 LINE L1 4354 6901 0 1873 207 17 94 chr2 120333209 120333785 -130354069 - L1MD1 LINE L1 -1886 4260 3729 5682 73 38 1 chr2 120333791 120334534 -130353320 - L1PA10 LINE L1 -4 6164 5395 11926 72 6 4 chr2 120334648 120336254 -130351600 - L1PA10 LINE L1 -3187 2959 1350 10747 216 92 20 chr2 120336433 120342398 -130345456 + L1PB1 LINE L1 65 6507 -360 328 150 30 130 chr2 120342401 120342501 -130345353 + L1MC4 LINE L1 6614 6703 -1339 529 219 8 0 chr2 120342503 120342622 -130345232 - L1 LINE L1 -1793 4353 4234 2332 122 11 8 chr2 120342629 120342997 -130344857 + L1PB1 LINE L1 6499 6867 0 22 35 0 0 chr2 120343000 120343029 -130344825 + AT_rich Low_complexity Low_complexity 1 29 0 5140 208 33 17 chr2 120343029 120343499 -130344355 + L1MA9 LINE L1 4182 4643 -1669 396 0 0 0 chr2 120343499 120343543 -130344311 + (CA)n Simple_repeat Simple_repeat 2 45 0 5140 208 33 17 chr2 120343543 120344658 -130343196 + L1MA9 LINE L1 4643 5739 -573 285 29 0 0 chr2 120344658 120344692 -130343162 + (CA)n Simple_repeat Simple_repeat 2 35 0 5140 208 33 17 chr2 120344692 120344832 -130343022 + L1MA9 LINE L1 5739 5875 -437 222 37 0 0 chr2 120344832 120344859 -130342995 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 279 0 0 0 chr2 120344858 120344889 -130342965 + (CA)n Simple_repeat Simple_repeat 2 32 0 5140 208 33 17 chr2 120344859 120345228 -130342626 + L1MA9 LINE L1 5875 6282 -30 1373 129 21 21 chr2 120345267 120345508 -130342346 + L1MA4 LINE L1 6039 6279 -21 26 30 0 0 chr2 120345511 120345544 -130342310 + AT_rich Low_complexity Low_complexity 1 33 0 207 105 26 0 chr2 120345803 120345841 -130342013 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2089 176 117 12 chr2 120345844 120346338 -130341516 + L1MD2 LINE L1 5812 6357 -2 1252 229 3 7 chr2 120346458 120346619 -130341235 - AluJo SINE Alu -21 291 130 471 95 0 0 chr2 120346619 120346693 -130341161 + (CGAA)n Simple_repeat Simple_repeat 3 76 0 1252 229 3 7 chr2 120346693 120346823 -130341031 - AluJo SINE Alu -182 130 1 333 269 159 26 chr2 120347010 120347195 -130340659 - L1ME LINE L1 -298 5823 5622 387 285 60 0 chr2 120347421 120347551 -130340303 - MIR SINE MIR -63 145 12 269 292 46 32 chr2 120347721 120347968 -130339886 + LTR16B LTR ERVL 131 450 -14 680 319 12 48 chr2 120348117 120348368 -130339486 - MIR SINE MIR -19 243 2 309 103 17 17 chr2 120348803 120348861 -130338993 + MIR SINE MIR 34 91 -171 1337 257 102 16 chr2 120348882 120349333 -130338521 - MLT1H LTR MaLR -15 534 45 243 236 0 0 chr2 120349361 120349416 -130338438 + MIR SINE MIR 100 154 -108 1915 142 15 127 chr2 120349438 120349840 -130338014 + LTR18A LTR ERVL 1 357 0 21142 69 2 3 chr2 120349850 120352518 -130335336 + L1P LINE L1 7 2671 -3475 185 155 14 42 chr2 120353584 120353655 -130334199 + (CATA)n Simple_repeat Simple_repeat 3 71 0 324 0 0 0 chr2 120354789 120354825 -130333029 + (TC)n Simple_repeat Simple_repeat 1 36 0 240 35 0 0 chr2 120354850 120354879 -130332975 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 317 24 24 0 chr2 120354878 120354920 -130332934 + (TG)n Simple_repeat Simple_repeat 2 44 0 1528 234 101 118 chr2 120355334 120355929 -130331925 - L1MC4 LINE L1 -140 7902 7337 396 0 0 0 chr2 120355929 120355973 -130331881 + (TG)n Simple_repeat Simple_repeat 1 44 0 1528 234 101 118 chr2 120355973 120356567 -130331287 - L1MC4 LINE L1 -705 7337 6734 270 0 0 0 chr2 120356609 120356639 -130331215 + (CA)n Simple_repeat Simple_repeat 2 31 0 214 280 48 91 chr2 120356789 120356861 -130330993 - L2 LINE L2 -3 3310 3236 600 102 242 38 chr2 120356861 120357018 -130330836 - MER53 DNA DNA 0 189 1 214 280 48 91 chr2 120357018 120357131 -130330723 - L2 LINE L2 -77 3236 3133 192 293 41 65 chr2 120357276 120357399 -130330455 - L2 LINE L2 -430 2884 2765 315 310 10 0 chr2 120357562 120357662 -130330192 - Charlie7 DNA MER1_type -2511 101 1 365 257 66 40 chr2 120357913 120358065 -130329789 + L2 LINE L2 2584 2739 -575 20868 38 6 3 chr2 120358167 120361074 -130326780 - L1P2 LINE L1 -404 5751 2840 7723 30 1 0 chr2 120361073 120361974 -130325880 - L1PA2 LINE L1 0 6155 5254 * 7540 53 17 1 chr2 120361980 120362972 -130324882 + L1P LINE L1 3151 4158 -1988 255 276 159 45 chr2 120363073 120363363 -130324491 + L2 LINE L2 2941 3263 -9 319 281 72 22 chr2 120363721 120363860 -130323994 - MIR3 SINE MIR -43 165 20 517 271 113 31 chr2 120363982 120364211 -130323643 + MIR SINE MIR 9 256 -6 208 348 71 58 chr2 120365015 120365239 -130322615 + L2 LINE L2 3038 3264 -8 372 237 303 0 chr2 120365545 120365697 -130322157 + MIR SINE MIR 47 244 -18 992 220 85 62 chr2 120365769 120366191 -130321663 + L2 LINE L2 1329 1760 -1554 279 225 181 7 chr2 120366371 120366509 -130321345 - L1ME4a LINE L1 -1 6120 5959 259 330 138 0 chr2 120366542 120366636 -130321218 - L2 LINE L2 -5 3267 3161 455 271 83 73 chr2 120366776 120367185 -130320669 - L2 LINE L2 -434 2880 2468 402 224 164 13 chr2 120367740 120367892 -130319962 + MLT1H LTR MaLR 32 206 -343 303 273 45 91 chr2 120368025 120368157 -130319697 + MLT1H LTR MaLR 424 549 0 318 285 111 37 chr2 120368193 120368448 -130319406 - L1ME4a LINE L1 -521 5600 5332 180 291 18 0 chr2 120368558 120368613 -130319241 - MIR SINE MIR -81 181 126 289 287 21 21 chr2 120368732 120368826 -130319028 + MIR SINE MIR 87 180 -82 3451 219 39 37 chr2 120368941 120369314 -130318540 - L1MDb LINE L1 -4384 2022 1651 2023 134 0 0 chr2 120369314 120369612 -130318242 + AluSx SINE Alu 1 298 -14 3451 219 39 37 chr2 120369612 120370617 -130317237 - L1MDb LINE L1 -4755 1651 660 357 307 142 74 chr2 120371715 120372011 -130315843 - L2 LINE L2 0 3272 2957 237 222 83 9 chr2 120372162 120372270 -130315584 - L2 LINE L2 -564 2750 2635 344 320 218 5 chr2 120372643 120372849 -130315005 + MIR SINE MIR 2 251 -11 233 328 157 0 chr2 120373394 120373528 -130314326 + MIR SINE MIR 47 201 -61 223 239 113 0 chr2 120373529 120373600 -130314254 - L2 LINE L2 -4 3309 3231 443 287 29 52 chr2 120376689 120376863 -130310991 + MIR SINE MIR 24 193 -69 662 251 75 51 chr2 120377118 120377373 -130310481 + MIR SINE MIR 2 262 0 186 118 0 0 chr2 120377704 120377738 -130310116 + (TC)n Simple_repeat Simple_repeat 2 35 0 186 118 0 0 chr2 120377773 120377807 -130310047 + (TC)n Simple_repeat Simple_repeat 2 35 0 186 118 0 0 chr2 120377907 120377941 -130309913 + (TC)n Simple_repeat Simple_repeat 2 35 0 247 174 23 0 chr2 120378045 120378131 -130309723 + CT-rich Low_complexity Low_complexity 2 89 0 296 295 36 27 chr2 120378545 120378657 -130309197 - L2 LINE L2 -1 3312 3200 461 304 58 0 chr2 120378702 120378873 -130308981 - MIR SINE MIR -76 186 6 210 293 138 53 chr2 120379599 120379787 -130308067 + MIR SINE MIR 23 226 -36 219 276 0 0 chr2 120380419 120380506 -130307348 + (CA)n Simple_repeat Simple_repeat 1 87 0 489 284 18 20 chr2 120381368 120381522 -130306332 - MIR SINE MIR -62 146 10 888 226 149 55 chr2 120381569 120381931 -130305923 - MSTD LTR MaLR 0 396 1 285 109 0 0 chr2 120382018 120382064 -130305790 + (GA)n Simple_repeat Simple_repeat 1 46 0 208 272 74 12 chr2 120383102 120383183 -130304671 - MER5A DNA MER1_type -103 86 1 364 301 44 7 chr2 120383265 120383401 -130304453 + MIR SINE MIR 13 153 -109 23 33 0 0 chr2 120383405 120383435 -130304419 + AT_rich Low_complexity Low_complexity 1 30 0 249 139 0 0 chr2 120383537 120383580 -130304274 + (TAG)n Simple_repeat Simple_repeat 1 43 0 581 223 96 48 chr2 120383621 120383809 -130304045 + MIR SINE MIR 40 236 -26 424 363 44 27 chr2 120383818 120384184 -130303670 + L3 LINE CR1 1191 1562 -15 180 250 71 18 chr2 120389047 120389103 -130298751 - MIR SINE MIR -161 101 43 380 354 23 0 chr2 120390110 120390240 -130297614 - MIR SINE MIR -110 152 20 1243 161 9 31 chr2 120391316 120391539 -130296315 + AluJo SINE Alu 85 302 -10 1248 41 18 6 chr2 120391548 120391579 -130296275 + (GAAA)n Simple_repeat Simple_repeat 1 204 0 1248 41 18 6 chr2 120391579 120391750 -130296104 + (GAAA)n Simple_repeat Simple_repeat 1 173 0 249 330 29 10 chr2 120391851 120391954 -130295900 + MIR SINE MIR 33 137 -71 219 345 25 42 chr2 120392542 120392661 -130295193 - L2 LINE L2 -171 3101 2985 870 217 17 17 chr2 120392662 120392842 -130295012 + MER5A DNA MER1_type 1 180 -9 495 313 37 8 chr2 120392975 120393164 -130294690 + MIR SINE MIR 32 227 -35 189 222 93 37 chr2 120393137 120393245 -130294609 - L2 LINE L2 -372 2941 2828 * 484 313 166 5 chr2 120393892 120394109 -130293745 - MIR SINE MIR -9 253 2 240 291 27 74 chr2 120394124 120394272 -130293582 - L2 LINE L2 -202 3070 2930 673 207 24 53 chr2 120396260 120396429 -130291425 - FRAM SINE Alu -2 164 1 226 259 0 0 chr2 120397214 120397268 -130290586 - L3b LINE CR1 -216 1367 1314 416 191 25 32 chr2 120397667 120397824 -130290030 + CT-rich Low_complexity Low_complexity 2 157 0 325 200 0 0 chr2 120398452 120398512 -130289342 - MLT1K LTR MaLR -252 336 277 282 29 0 0 chr2 120399199 120399234 -130288620 + (CAA)n Simple_repeat Simple_repeat 2 36 0 533 221 70 19 chr2 120399880 120400038 -130287816 - MER88 LTR ERVL -123 341 176 289 225 38 0 chr2 120400208 120400288 -130287566 - MER88 LTR ERVL -303 161 79 2957 33 3 0 chr2 120400367 120400730 -130287124 - L1PA4 LINE L1 -20 6135 5772 2209 122 3 0 chr2 120401227 120401531 -130286323 + AluSq SINE Alu 1 305 -8 305 232 0 0 chr2 120401534 120401590 -130286264 - L1MC4 LINE L1 -1339 6703 6648 418 351 100 20 chr2 120401697 120401996 -130285858 + L3 LINE CR1 531 853 -724 254 282 0 35 chr2 120402036 120402121 -130285733 + L2 LINE L2 3198 3279 -34 219 262 49 0 chr2 120402264 120402325 -130285529 - MIR SINE MIR -81 181 118 197 293 78 43 chr2 120402649 120402765 -130285089 - MIR SINE MIR -62 146 27 5348 121 87 27 chr2 120403750 120404856 -130282998 - MER11A LTR ERVK 0 1266 1 612 228 34 17 chr2 120404856 120405117 -130282737 - MLT1G LTR MaLR -132 410 178 254 263 0 0 chr2 120406360 120406417 -130281437 + MIR3 SINE MIR 110 166 -42 1080 177 10 0 chr2 120407336 120407534 -130280320 + MER3 DNA MER1_type 10 209 0 2138 181 80 8 chr2 120407580 120408055 -130279799 + L1MB5 LINE L1 5658 6166 -8 236 157 39 0 chr2 120408150 120408201 -130279653 + CT-rich Low_complexity Low_complexity 3 55 0 318 302 43 9 chr2 120408205 120408321 -130279533 - L1M4 LINE L1 -2954 3192 3073 887 222 30 65 chr2 120408328 120408558 -130279296 - AluJb SINE Alu -4 308 87 617 305 33 9 chr2 120409451 120409664 -130278190 + MIR SINE MIR 20 237 -25 1440 83 0 0 chr2 120409913 120410105 -130277749 + L1PA6 LINE L1 5963 6154 0 1146 206 63 112 chr2 120410474 120410857 -130276997 + MLT1A1 LTR MaLR 2 365 0 349 309 0 0 chr2 120410879 120410960 -130276894 + MIR3 SINE MIR 121 201 -7 683 238 16 11 chr2 120411432 120411617 -130276237 - MER3 DNA MER1_type 0 209 24 213 330 68 11 chr2 120411943 120412031 -130275823 - MIR SINE MIR -14 248 156 200 294 0 15 chr2 120412073 120412141 -130275713 + MIR SINE MIR 189 255 -7 205 230 95 68 chr2 120412179 120412253 -130275601 - MIR3 SINE MIR -125 83 8 388 242 25 8 chr2 120412596 120412716 -130275138 + LTR67 LTR ERVL 432 553 -4 485 215 58 0 chr2 120412901 120413022 -130274832 + MLT1H LTR MaLR 20 147 -402 395 203 0 119 chr2 120413167 120413310 -130274544 + MLT1H LTR MaLR 424 549 0 446 307 47 33 chr2 120413358 120413570 -130274284 - MIR SINE MIR 0 262 48 1331 296 94 50 chr2 120413864 120415068 -130272786 + L2 LINE L2 2309 3272 0 378 262 43 38 chr2 120415267 120415419 -130272435 + L2 LINE L2 2838 2987 -285 471 329 45 18 chr2 120416255 120416477 -130271377 - L2 LINE L2 0 3272 3045 258 355 8 24 chr2 120416601 120416725 -130271129 - MIR SINE MIR -65 143 22 2234 104 3 0 chr2 120416893 120417182 -130270672 + AluSx SINE Alu 1 290 -22 407 311 60 13 chr2 120417210 120417361 -130270493 - MIR3 SINE MIR -49 159 2 333 0 0 0 chr2 120417369 120417406 -130270448 + (CA)n Simple_repeat Simple_repeat 2 38 0 22 35 0 0 chr2 120417749 120417778 -130270076 + AT_rich Low_complexity Low_complexity 1 29 0 1402 108 10 0 chr2 120417853 120418057 -130269797 - L1PA10 LINE L1 -3 6165 5960 21 36 0 0 chr2 120418199 120418227 -130269627 + AT_rich Low_complexity Low_complexity 1 28 0 603 292 117 21 chr2 120418506 120418879 -130268975 - L1ME LINE L1 -430 5740 5319 332 274 110 20 chr2 120418907 120419053 -130268801 - L1ME LINE L1 -874 5272 5114 634 19 19 39 chr2 120419194 120419297 -130268557 + (TAGA)n Simple_repeat Simple_repeat 2 102 0 370 325 42 24 chr2 120420089 120420301 -130267553 - L1MC4a LINE L1 -1910 5898 5683 1063 177 74 4 chr2 120420334 120420754 -130267100 + MLT1D LTR MaLR 1 505 0 337 238 0 48 chr2 120420760 120420844 -130267010 + L2 LINE L2 3228 3307 -6 652 293 59 41 chr2 120420942 120421293 -130266561 - L1MC4a LINE L1 -749 5397 5237 2313 103 0 10 chr2 120421684 120421995 -130265859 + AluSx SINE Alu 1 308 -4 31 0 0 0 chr2 120421995 120422026 -130265828 + AT_rich Low_complexity Low_complexity 1 31 0 461 282 57 0 chr2 120422035 120422159 -130265695 - MIR SINE MIR -66 196 66 529 276 79 13 chr2 120422201 120422353 -130265501 - MIR SINE MIR -81 181 20 234 247 200 0 chr2 120422394 120422479 -130265375 - MER5B DNA MER1_type -76 102 1 562 307 25 25 chr2 120424453 120424655 -130263199 - MIR SINE MIR -13 249 48 189 273 40 71 chr2 120425175 120425274 -130262580 - MIR SINE MIR -132 130 35 1557 215 0 7 chr2 120425514 120425637 -130262217 + AluJo SINE Alu 1 123 -189 180 0 0 0 chr2 120425637 120425657 -130262197 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1557 215 0 7 chr2 120425657 120425817 -130262037 + AluJo SINE Alu 123 282 -30 268 336 82 9 chr2 120427593 120427703 -130260151 + L2 LINE L2 3155 3272 0 537 247 19 32 chr2 120427873 120428027 -130259827 - MER5A DNA MER1_type -35 154 3 216 156 22 22 chr2 120429115 120429160 -130258694 + MIR SINE MIR 107 151 -111 330 225 29 18 chr2 120429986 120430260 -130257594 + (TA)n Simple_repeat Simple_repeat 1 277 0 453 327 63 25 chr2 120430272 120430431 -130257423 - MIR SINE MIR -97 165 1 261 371 142 48 chr2 120430438 120430996 -130256858 - L3 LINE CR1 -934 643 34 645 296 42 32 chr2 120432752 120433036 -130254818 + LTR16A LTR ERVL 164 450 0 331 342 51 4 chr2 120433107 120433364 -130254490 - L1M4 LINE L1 -2580 3566 3298 671 226 68 123 chr2 120434035 120434331 -130253523 + L1M4c LINE L1 2194 2444 -3938 1644 202 13 10 chr2 120434331 120434638 -130253216 + AluJo SINE Alu 1 308 -4 671 226 68 123 chr2 120434638 120434918 -130252936 + L1M4c LINE L1 2444 2738 -3644 4541 43 0 2 chr2 120434927 120435503 -130252351 - L1PA6 LINE L1 -1362 4784 4210 7101 62 2 0 chr2 120435503 120436886 -130250968 + L1PA6 LINE L1 4763 6153 -1 2288 237 20 70 chr2 120436875 120437990 -130249864 + L1MA4 LINE L1 705 1894 -4120 381 141 0 42 chr2 120438013 120438084 -130249770 - MER41B LTR ERV1 -88 547 480 1613 196 66 38 chr2 120438091 120438714 -130249140 + L1MA4 LINE L1 1906 2547 -3781 * 4450 160 20 25 chr2 120438698 120439660 -130248194 + L1MA4 LINE L1 5310 6239 -243 3124 97 32 5 chr2 120439685 120440119 -130247735 + MLT2A2 LTR ERVL 1 446 -7 775 184 82 10 chr2 120440123 120440330 -130247524 + L1MA4 LINE L1 6250 6471 -11 2011 123 0 34 chr2 120440407 120440747 -130247107 - AluSx SINE Alu 0 330 1 356 323 67 14 chr2 120440838 120441120 -130246734 + L1M4 LINE L1 3629 3925 -2221 231 307 61 64 chr2 120441377 120441719 -130246135 + L1M4 LINE L1 4009 4349 -1797 256 200 18 0 chr2 120442400 120442455 -130245399 + MIR SINE MIR 90 145 -117 671 270 128 10 chr2 120442591 120442886 -130244968 - L1ME3 LINE L1 -1 6161 5816 276 307 106 28 chr2 120444385 120444603 -130243251 + LTR16C LTR ERVL 257 491 0 272 320 76 84 chr2 120445480 120446096 -130241758 - L3 LINE CR1 -264 1313 703 763 238 5 16 chr2 120446147 120446332 -130241522 + L1PA16 LINE L1 5968 6150 -16 180 77 0 0 chr2 120446578 120446604 -130241250 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 362 299 24 8 chr2 120446618 120446745 -130241109 - L3 LINE CR1 -931 646 518 22 0 0 0 chr2 120447845 120447867 -130239987 + AT_rich Low_complexity Low_complexity 1 22 0 250 211 42 74 chr2 120448791 120448886 -130238968 + L1ME4a LINE L1 5312 5403 -718 42 20 0 0 chr2 120449109 120449158 -130238696 + AT_rich Low_complexity Low_complexity 1 49 0 382 283 9 0 chr2 120449193 120449306 -130238548 + L1ME4a LINE L1 5732 5845 -276 4524 169 39 26 chr2 120449329 120450301 -130237553 - L1MB8 LINE L1 -1 6177 5191 794 274 102 47 chr2 120450988 120451437 -130236417 - MLT1L LTR MaLR 0 615 142 2313 103 0 3 chr2 120452204 120452505 -130235349 + AluSx SINE Alu 1 300 -12 646 237 29 5 chr2 120452739 120452946 -130234908 + MER113 DNA MER1_type? 23 234 -287 471 252 87 63 chr2 120453809 120453941 -130233913 + MIR SINE MIR 37 178 -84 2070 126 3 3 chr2 120453941 120454262 -130233592 - AluSp SINE Alu 0 321 1 471 252 87 63 chr2 120454262 120454334 -130233520 + MIR SINE MIR 178 247 -15 359 274 71 18 chr2 120455457 120455570 -130232284 + MER5B DNA MER1_type 3 121 -57 193 263 202 35 chr2 120456056 120456170 -130231684 - L2 LINE L2 0 3272 3140 603 103 0 0 chr2 120456501 120456598 -130231256 + (TGGA)n Simple_repeat Simple_repeat 3 99 0 241 279 35 114 chr2 120456853 120457054 -130230800 + L2 LINE L2 3035 3219 -53 2205 73 0 4 chr2 120457759 120458033 -130229821 - AluYa5 SINE Alu 0 311 39 188 135 27 0 chr2 120459661 120459698 -130228156 + (TGGG)n Simple_repeat Simple_repeat 2 39 0 225 154 0 0 chr2 120459778 120459817 -130228037 + GA-rich Low_complexity Low_complexity 2 40 0 5058 232 49 60 chr2 120459838 120460705 -130227149 - L1M4 LINE L1 -790 5356 4480 2257 113 0 0 chr2 120460705 120460996 -130226858 - AluSx SINE Alu -21 291 1 5058 232 49 60 chr2 120460996 120462082 -130225772 - L1M4 LINE L1 -1666 4480 3426 1539 233 42 32 chr2 120462111 120462639 -130225215 - L1MEc LINE L1 -3379 2836 2304 853 159 0 0 chr2 120462655 120462781 -130225073 + FLAM_C SINE Alu 2 127 -16 1229 271 117 22 chr2 120462812 120463494 -130224360 - L1MEc LINE L1 -4049 2347 1601 1241 190 25 25 chr2 120463503 120463787 -130224067 + L1 LINE L1 3672 3955 -2191 1438 184 16 57 chr2 120463815 120464130 -130223724 + AluJb SINE Alu 10 311 -1 40755 68 12 2 chr2 120464139 120470225 -130217629 + L1PA5 LINE L1 1 6146 -8 1971 215 200 3 chr2 120470215 120470415 -130217439 + L1 LINE L1 3946 4105 -2041 * 213 94 0 0 chr2 120470415 120470447 -130217407 + (CA)n Simple_repeat Simple_repeat 1 32 0 1971 215 200 3 chr2 120470447 120470855 -130216999 + L1 LINE L1 4105 4674 -1472 229 97 0 0 chr2 120470848 120470879 -130216975 - L1P LINE L1 -1513 4633 4603 * 2052 33 0 0 chr2 120470901 120471142 -130216712 - L1P LINE L1 -1513 4633 4393 1158 296 75 58 chr2 120471149 120472184 -130215670 - L1MEc LINE L1 -5211 1185 133 647 277 62 22 chr2 120472624 120472848 -130215006 + MIR SINE MIR 20 252 -10 2037 138 144 6 chr2 120473045 120473406 -130214448 + MSTA LTR MaLR 1 411 -17 226 322 6 44 chr2 120473911 120474091 -130213763 + CT-rich Low_complexity Low_complexity 2 174 0 362 108 15 0 chr2 120474151 120474216 -130213638 + (TC)n Simple_repeat Simple_repeat 1 66 0 709 274 19 14 chr2 120474573 120474781 -130213073 + MIR SINE MIR 4 212 -50 434 254 143 43 chr2 120474943 120475152 -130212702 - MIR SINE MIR -13 249 20 333 0 0 0 chr2 120475946 120475983 -130211871 + (TG)n Simple_repeat Simple_repeat 2 38 0 251 329 14 0 chr2 120477227 120477300 -130210554 + L2 LINE L2 3159 3232 -40 264 59 0 0 chr2 120477307 120477341 -130210513 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 492 194 10 19 chr2 120477567 120477670 -130210184 - MER5B DNA MER1_type -22 156 55 290 206 16 0 chr2 120477719 120477782 -130210072 + MER5A DNA MER1_type 9 72 -117 2173 123 0 0 chr2 120477785 120478077 -130209777 + AluSx SINE Alu 1 292 -20 1125 124 0 21 chr2 120478078 120478264 -130209590 + L1MA9 LINE L1 6131 6312 0 540 224 47 24 chr2 120478398 120478568 -130209286 + MER5B DNA MER1_type 3 176 -2 305 284 12 12 chr2 120478625 120478706 -130209148 + L2 LINE L2 3116 3196 -76 * 367 290 30 108 chr2 120478694 120479063 -130208791 - L2 LINE L2 -1 3271 2932 457 244 62 67 chr2 120479069 120479294 -130208560 + L1MC4a LINE L1 5665 5888 -1920 353 296 65 18 chr2 120479316 120479485 -130208369 - MIR SINE MIR -59 203 27 2790 135 84 18 chr2 120479897 120480408 -130207446 - LTR10A LTR ERV1 -64 545 1 213 94 0 0 chr2 120482398 120482430 -130205424 + (A)n Simple_repeat Simple_repeat 1 32 0 2047 100 33 33 chr2 120483061 120483362 -130204492 + AluSx SINE Alu 1 301 -11 323 345 41 29 chr2 120484132 120484303 -130203551 + MIR SINE MIR 61 233 -29 259 333 0 30 chr2 120484592 120484724 -130203130 - MLT1K LTR MaLR -3 585 458 444 303 54 11 chr2 120486216 120486429 -130201425 + MIR SINE MIR 30 247 -15 203 310 14 0 chr2 120486803 120486874 -130200980 + MIR SINE MIR 76 147 -61 425 245 29 0 chr2 120487586 120487688 -130200166 - MIR SINE MIR -89 173 69 197 32 0 32 chr2 120489403 120489434 -130198420 + (CCTG)n Simple_repeat Simple_repeat 3 32 0 660 260 22 26 chr2 120490514 120490565 -130197289 + Charlie5 DNA MER1_type 2399 2449 -175 2370 67 6 22 chr2 120490565 120490878 -130196976 + AluSp SINE Alu 1 308 -5 660 260 22 26 chr2 120490878 120491053 -130196801 + Charlie5 DNA MER1_type 2449 2624 0 878 223 88 5 chr2 120491059 120491252 -130196602 + MER3 DNA MER1_type 1 209 0 331 288 27 18 chr2 120491284 120491395 -130196459 - MER5B DNA MER1_type -5 173 62 453 284 124 41 chr2 120491444 120491638 -130196216 - MIR SINE MIR -1 261 52 194 280 0 0 chr2 120493135 120493185 -130194669 - MIR SINE MIR -65 143 94 194 355 121 12 chr2 120493975 120494141 -130193713 - MIR SINE MIR -59 203 20 345 165 21 7 chr2 120494196 120494286 -130193568 + MER5A DNA MER1_type 1 155 -34 291 209 67 48 chr2 120494219 120494324 -130193530 - MER5A DNA MER1_type -76 113 7 * 1877 186 68 22 chr2 120494422 120494836 -130193018 + MER31B LTR ERV1 34 466 0 2213 107 3 0 chr2 120495516 120495826 -130192028 - AluSx SINE Alu -1 311 1 253 333 36 0 chr2 120495979 120496063 -130191791 + MIR SINE MIR 70 156 -106 202 196 39 0 chr2 120496110 120496161 -130191693 - MIR SINE MIR -59 149 97 518 220 107 7 chr2 120496831 120496981 -130190873 + MER5B DNA MER1_type 14 178 0 211 267 0 0 chr2 120496984 120497029 -130190825 - MIR3 SINE MIR -6 202 158 2000 119 0 31 chr2 120497036 120497355 -130190499 + AluSx SINE Alu 1 309 -3 485 327 45 14 chr2 120499031 120499251 -130188603 - MIR SINE MIR 0 262 36 192 267 67 4 chr2 120499314 120499391 -130188463 - MIR SINE MIR -63 145 86 285 217 13 77 chr2 120499403 120499505 -130188349 + L1MD2 LINE L1 6046 6142 -24 2283 103 0 6 chr2 120499849 120500160 -130187694 + AluSc SINE Alu 1 309 0 390 322 61 11 chr2 120500587 120500767 -130187087 - MIR SINE MIR -72 190 2 362 284 90 7 chr2 120501017 120501172 -130186682 - MIR3 SINE MIR -2 206 39 194 203 38 51 chr2 120502060 120502139 -130185715 + MIR SINE MIR 8 85 -177 1320 209 20 80 chr2 120502243 120502641 -130185213 - MLT1A2 LTR MaLR 0 374 1 191 316 26 35 chr2 120503689 120503803 -130184051 - L2 LINE L2 0 3313 3201 234 232 18 0 chr2 120503833 120503889 -130183965 - MIR3 SINE MIR -19 189 133 382 275 128 7 chr2 120504300 120504449 -130183405 + MIR SINE MIR 46 212 -50 205 335 11 28 chr2 120505057 120505236 -130182618 + G-rich Low_complexity Low_complexity 4 179 0 1889 135 3 33 chr2 120506568 120506872 -130180982 + AluJo SINE Alu 7 301 -11 459 0 0 0 chr2 120507103 120507154 -130180700 + (TG)n Simple_repeat Simple_repeat 1 51 0 895 188 61 81 chr2 120507158 120507578 -130180276 - MLT1D LTR MaLR -8 497 3 207 274 74 74 chr2 120507587 120507682 -130180172 - L2 LINE L2 -19 3294 3200 750 309 88 32 chr2 120509156 120509622 -130178232 - L2 LINE L2 0 3313 2822 395 242 117 14 chr2 120509638 120509781 -130178073 + MIR SINE MIR 31 186 -63 406 279 93 11 chr2 120509788 120509952 -130177902 + MIR SINE MIR 20 190 -63 357 329 29 120 chr2 120510480 120510863 -130176991 + L2 LINE L2 2924 3271 -1 775 250 43 30 chr2 120511662 120511905 -130175949 + MIR SINE MIR 12 262 0 537 299 95 9 chr2 120511983 120512204 -130175650 + MIR SINE MIR 20 259 -3 1692 122 11 21 chr2 120512445 120512724 -130175130 + L1PB3 LINE L1 5877 6152 -2 406 174 70 9 chr2 120512730 120512845 -130175009 + MER96B DNA MER1_type? 254 375 -42 605 161 8 0 chr2 120514136 120514266 -130173588 + (TGGA)n Simple_repeat Simple_repeat 4 134 0 304 296 110 17 chr2 120514439 120514576 -130173278 + MIR3 SINE MIR 13 157 -72 202 139 23 0 chr2 120515147 120515190 -130172664 + (CA)n Simple_repeat Simple_repeat 1 44 0 227 294 15 15 chr2 120515576 120515644 -130172210 + L2 LINE L2 3242 3309 -4 412 318 50 45 chr2 120515910 120516152 -130171702 + MIR SINE MIR 20 262 0 254 261 78 70 chr2 120516908 120517050 -130170804 + MIR SINE MIR 117 259 -3 368 298 126 11 chr2 120517167 120517358 -130170496 - MIR SINE MIR -1 261 49 205 290 174 0 chr2 120517510 120517579 -130170275 - MIR SINE MIR -59 203 123 724 252 0 0 chr2 120517585 120517720 -130170134 + FLAM_C SINE Alu 3 137 -6 355 238 57 29 chr2 120517795 120517900 -130169954 + MIR SINE MIR 19 126 -136 492 275 88 92 chr2 120519790 120520212 -130167642 - L2 LINE L2 0 3272 2853 603 214 117 7 chr2 120520358 120520512 -130167342 + MIR SINE MIR 20 190 -72 378 309 14 0 chr2 120522049 120522188 -130165666 + MIR SINE MIR 13 154 -65 24 91 0 0 chr2 120526750 120526816 -130161038 + GC_rich Low_complexity Low_complexity 1 66 0 2189 108 3 0 chr2 120527789 120528095 -130159759 + AluSp SINE Alu 1 307 -6 229 189 132 113 chr2 120528252 120528358 -130159496 - MARNA DNA Mariner -194 392 285 217 368 23 0 chr2 120528459 120528546 -130159308 + MIR SINE MIR 44 132 -76 252 307 26 18 chr2 120528628 120528742 -130159112 - MARNA DNA Mariner -431 155 41 229 304 143 0 chr2 120528878 120528990 -130158864 - MIR SINE MIR -11 251 124 746 256 29 21 chr2 120529191 120529429 -130158425 + MIR SINE MIR 20 259 -3 2184 128 0 0 chr2 120530068 120530380 -130157474 - AluSx SINE Alu 0 312 1 315 308 8 95 chr2 120530722 120530985 -130156869 + L2 LINE L2 2946 3185 -87 323 313 31 0 chr2 120531015 120531111 -130156743 - L2 LINE L2 0 3272 3174 1137 295 58 61 chr2 120531309 120531933 -130155921 - L2 LINE L2 -451 2863 2242 910 109 0 16 chr2 120531934 120532062 -130155792 + AluJb SINE Alu 1 126 -186 614 268 56 19 chr2 120532376 120532589 -130155265 + MLT1J2 LTR MaLR 3 223 -227 449 242 136 0 chr2 120532595 120532727 -130155127 - MIR SINE MIR 0 262 113 27 29 0 0 chr2 120532938 120532972 -130154882 + AT_rich Low_complexity Low_complexity 1 34 0 592 214 6 6 chr2 120533134 120533293 -130154561 + CT-rich Low_complexity Low_complexity 3 161 0 200 350 95 7 chr2 120533311 120533448 -130154406 - L2 LINE L2 -2 3311 3163 207 0 0 0 chr2 120534471 120534494 -130153360 + (GA)n Simple_repeat Simple_repeat 2 24 0 242 287 194 0 chr2 120534651 120534759 -130153095 - L2 LINE L2 0 3272 3144 181 256 0 0 chr2 120535290 120535329 -130152525 - MIR SINE MIR -7 255 217 414 0 0 0 chr2 120535918 120535964 -130151890 + (CA)n Simple_repeat Simple_repeat 2 47 0 821 202 16 27 chr2 120536398 120536581 -130151273 + AluJb SINE Alu 113 293 -19 842 266 12 20 chr2 120536681 120536925 -130150929 + MIR SINE MIR 21 262 0 181 255 0 0 chr2 120537148 120537195 -130150659 + MIR SINE MIR 99 145 -63 390 184 0 0 chr2 120537282 120537358 -130150496 + GA-rich Low_complexity Low_complexity 2 77 0 340 260 143 87 chr2 120538019 120538195 -130149659 + MIR SINE MIR 13 206 -56 1668 177 33 17 chr2 120538195 120538494 -130149360 + 7SLRNA srpRNA srpRNA 1 304 -16 340 260 143 87 chr2 120538494 120538548 -130149306 + MIR SINE MIR 206 256 -6 377 205 260 8 chr2 120539354 120539481 -130148373 + Charlie4 DNA MER1_type 33 191 -1770 294 29 0 0 chr2 120539482 120539517 -130148337 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 2122 46 0 0 chr2 120539517 120539779 -130148075 - L1PA8 LINE L1 -24 6148 5887 636 230 47 5 chr2 120539872 120540063 -130147791 + Charlie4 DNA MER1_type 1756 1954 -7 478 231 170 6 chr2 120540070 120540252 -130147602 + MIR SINE MIR 31 242 -20 857 199 70 101 chr2 120540324 120540390 -130147464 - MLT2C1 LTR ERVL 0 397 330 2157 88 3 75 chr2 120540390 120540708 -130147146 + AluSp SINE Alu 1 295 -18 857 199 70 101 chr2 120540708 120540928 -130146926 - MLT2C1 LTR ERVL -67 330 120 1206 184 47 5 chr2 120540929 120541141 -130146713 + AluJo SINE Alu 1 221 -91 709 194 0 7 chr2 120541142 120541286 -130146568 + AluJo/FRAM SINE Alu 161 303 -9 589 183 8 48 chr2 120541289 120541315 -130146539 - MLT2C1 LTR ERVL -274 123 98 1532 158 153 42 chr2 120541315 120541700 -130146154 + MSTC LTR MaLR 1 428 0 589 183 8 48 chr2 120541700 120541799 -130146055 - MLT2C1 LTR ERVL -299 98 3 201 339 127 0 chr2 120542081 120542199 -130145655 - L2 LINE L2 -18 3254 3122 2403 78 13 0 chr2 120542226 120542532 -130145322 + AluSx SINE Alu 1 310 -2 623 190 42 21 chr2 120543783 120543925 -130143929 - MIR SINE MIR -70 192 48 230 345 64 0 chr2 120544378 120544488 -130143366 + MIR3 SINE MIR 57 173 -35 2246 118 20 23 chr2 120544524 120544915 -130142939 - MLT1B LTR MaLR 0 390 1 2529 79 0 0 chr2 120544954 120545258 -130142596 + AluSx SINE Alu 1 304 -8 257 247 48 92 chr2 120545503 120545647 -130142207 + MIR SINE MIR 19 154 -63 525 274 29 65 chr2 120545665 120545910 -130141944 + LTR16C LTR ERVL 42 277 -214 181 244 0 24 chr2 120546870 120546911 -130140943 - MIR SINE MIR -198 64 25 198 306 0 0 chr2 120548168 120548217 -130139637 + MIR SINE MIR 52 100 -108 1190 223 181 3 chr2 120548231 120548567 -130139287 + MSTD LTR MaLR 1 396 0 251 208 8 192 chr2 120548673 120548723 -130139131 - L2 LINE L2 -29 3284 3267 2454 102 0 0 chr2 120548723 120549036 -130138818 + AluSq SINE Alu 1 313 0 251 208 8 192 chr2 120549036 120549105 -130138749 - L2 LINE L2 -46 3267 3187 740 178 0 0 chr2 120551232 120551361 -130136493 + FLAM_C SINE Alu 3 131 -2 2268 109 0 7 chr2 120551660 120551962 -130135892 - AluSx SINE Alu -12 300 1 189 107 0 0 chr2 120552027 120552055 -130135799 + (GAAAA)n Simple_repeat Simple_repeat 4 31 0 685 259 112 19 chr2 120552442 120552755 -130135099 - MLT1L LTR MaLR -106 509 168 2047 271 57 28 chr2 120552785 120553540 -130134314 - MER20B DNA MER1_type -6 777 1 1621 153 107 4 chr2 120553755 120554036 -130133818 + AluJb SINE Alu 1 310 -2 3121 210 98 34 chr2 120554760 120555287 -130132567 - MER21B LTR ERV1 0 863 266 2144 117 0 0 chr2 120555287 120555570 -130132284 - AluSx SINE Alu -12 300 18 3121 210 98 34 chr2 120555570 120555836 -130132018 - MER21B LTR ERV1 -597 266 19 1291 110 46 68 chr2 120555962 120556225 -130131629 - Tigger2 DNA MER2_type 0 2718 2462 3861 127 20 82 chr2 120556283 120557085 -130130769 - Tigger2 DNA MER2_type -1964 754 3 734 170 0 22 chr2 120557154 120557289 -130130565 + AluJo SINE Alu 4 135 -177 2082 154 0 19 chr2 120557423 120557741 -130130113 - AluSx SINE Alu 0 312 1 1290 190 29 81 chr2 120557824 120558208 -130129646 + MLT1A1 LTR MaLR 1 364 -1 309 259 0 25 chr2 120558462 120558543 -130129311 + L1MC4 LINE L1 6595 6673 -1369 357 289 84 54 chr2 120558910 120559076 -130128778 + LTR16C LTR ERVL 159 329 -162 2276 144 42 0 chr2 120559086 120559467 -130128387 - MER57A LTR ERV1 0 403 7 2347 92 0 3 chr2 120559467 120559796 -130128058 - AluSq SINE Alu 0 328 1 391 58 0 0 chr2 120559802 120559854 -130128000 - Alu SINE Alu -251 52 1 396 58 0 0 chr2 120559860 120559912 -130127942 - Alu SINE Alu -248 52 1 275 226 75 68 chr2 120559950 120560083 -130127771 + LTR16C LTR ERVL 358 491 0 1470 189 59 39 chr2 120560140 120560340 -130127514 + Charlie1b DNA MER1_type 2 196 -2565 1423 186 69 22 chr2 120560340 120560762 -130127092 + AluJo SINE Alu 2 312 0 1470 189 59 39 chr2 120560762 120561027 -130126827 + Charlie1b DNA MER1_type 196 514 -9 189 0 0 0 chr2 120561079 120561100 -130126754 + (TTA)n Simple_repeat Simple_repeat 2 22 0 769 161 0 0 chr2 120561102 120561220 -130126634 - FLAM_C SINE Alu -15 118 1 319 287 132 0 chr2 120561831 120561967 -130125887 + MIR SINE MIR 65 218 -44 2095 138 0 0 chr2 120561996 120562285 -130125569 + AluJo SINE Alu 5 293 -19 198 0 0 0 chr2 120562285 120562307 -130125547 + (GA)n Simple_repeat Simple_repeat 2 23 0 810 81 0 0 chr2 120562427 120562538 -130125316 + (GGAA)n Simple_repeat Simple_repeat 4 114 0 235 158 0 0 chr2 120562564 120562602 -130125252 + L2 LINE L2 2440 2477 -837 455 277 8 15 chr2 120562763 120562893 -130124961 + L1M4 LINE L1 3983 4111 -2035 1795 190 80 25 chr2 120562907 120563380 -130124474 + L1ME1 LINE L1 5649 6147 -19 180 268 54 18 chr2 120563629 120563685 -130124169 - MER5A DNA MER1_type -4 185 128 652 211 122 0 chr2 120563690 120563846 -130124008 + FRAM SINE Alu 1 175 -1 1025 96 22 11 chr2 120563856 120564034 -130123820 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 871 193 7 0 chr2 120564049 120564321 -130123533 + GA-rich Low_complexity Low_complexity 1 274 0 201 286 13 0 chr2 120566894 120566971 -130120883 + CT-rich Low_complexity Low_complexity 2 79 0 232 247 75 32 chr2 120567515 120567608 -130120246 - L2 LINE L2 -56 3257 3161 818 276 68 19 chr2 120567658 120567981 -130119873 - LTR16A LTR ERVL -96 354 16 528 258 45 56 chr2 120568166 120568273 -130119581 - MIR SINE MIR -3 259 152 1817 186 0 3 chr2 120568273 120568574 -130119280 + AluJb SINE Alu 1 300 -12 2204 115 0 0 chr2 120568577 120568897 -130118957 + AluSx SINE Alu 1 312 0 528 258 45 56 chr2 120568897 120568983 -130118871 - MIR SINE MIR -112 150 64 449 321 45 35 chr2 120569137 120569424 -130118430 - L3 LINE CR1 -407 1170 881 297 218 73 36 chr2 120569576 120569686 -130118168 - LTR16A1 LTR ERVL 0 457 344 234 247 24 24 chr2 120569744 120569829 -130118025 - LTR16A1 LTR ERVL -225 232 148 2189 102 0 0 chr2 120569968 120570243 -130117611 + AluY SINE Alu 1 275 -36 270 0 0 0 chr2 120570247 120570277 -130117577 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 588 101 0 0 chr2 120571266 120571355 -130116499 + (TGGA)n Simple_repeat Simple_repeat 2 90 0 962 271 119 24 chr2 120571767 120572136 -130115718 + L1MC4a LINE L1 5520 5923 -1885 2206 126 3 0 chr2 120572192 120572494 -130115360 + AluSp SINE Alu 1 303 -10 33 0 0 0 chr2 120572643 120572676 -130115178 + AT_rich Low_complexity Low_complexity 1 33 0 229 244 33 44 chr2 120572859 120572949 -130114905 - L2 LINE L2 -7 3265 3177 1263 298 54 24 chr2 120573332 120573835 -130114019 - MER115 DNA AcHobo -171 522 5 451 179 0 0 chr2 120574168 120574246 -130113608 + FLAM SINE Alu 50 127 -16 2145 128 0 0 chr2 120574253 120574550 -130113304 - AluSx SINE Alu -15 297 1 378 253 227 7 chr2 120574562 120574712 -130113142 + MER5A DNA MER1_type 7 189 0 1335 201 0 34 chr2 120575324 120575588 -130112266 + AluJo SINE Alu 1 255 -57 273 289 0 10 chr2 120575630 120575727 -130112127 + MER112 DNA MER1_type 74 169 -91 221 0 35 0 chr2 120575860 120575889 -130111965 + (TATAA)n Simple_repeat Simple_repeat 2 31 0 213 279 45 65 chr2 120576340 120576494 -130111360 + MIR3 SINE MIR 47 197 -11 209 172 138 0 chr2 120576954 120577012 -130110842 + MIR SINE MIR 88 153 -109 314 179 12 119 chr2 120577032 120577116 -130110738 + MIR3 SINE MIR 119 193 -15 344 296 48 8 chr2 120577570 120577695 -130110159 + LTR16C LTR ERVL 312 441 -50 191 282 60 26 chr2 120578132 120578249 -130109605 - MIR3 SINE MIR -6 202 82 306 268 0 10 chr2 120578541 120578638 -130109216 - MER112 DNA MER1_type -91 169 74 2301 99 36 0 chr2 120578904 120579206 -130108648 - AluSq SINE Alu 0 313 1 3009 185 82 20 chr2 120579518 120580259 -130107595 - LTR48 LTR ERV1 0 787 1 2278 123 3 0 chr2 120581598 120581906 -130105948 + AluSq SINE Alu 1 309 -4 2244 110 0 13 chr2 120582385 120582693 -130105161 + AluSx SINE Alu 2 305 -7 354 345 40 7 chr2 120582783 120582931 -130104923 + MIR3 SINE MIR 8 160 -48 963 145 13 53 chr2 120583556 120583783 -130104071 + L1MA4 LINE L1 6075 6292 -8 1349 181 4 16 chr2 120583814 120584057 -130103797 - AluJo SINE Alu -63 249 10 186 209 0 23 chr2 120584594 120584637 -130103217 - MIR SINE MIR -107 155 114 629 224 130 26 chr2 120585089 120585281 -130102573 + MIR SINE MIR 50 261 -1 256 278 218 0 chr2 120585918 120586051 -130101803 - MIR SINE MIR -14 248 87 297 321 179 8 chr2 120586618 120586752 -130101102 + MIR SINE MIR 32 188 -74 293 244 213 8 chr2 120587905 120588032 -130099822 - MER5A DNA MER1_type 0 189 37 852 275 161 19 chr2 120589459 120590009 -130097845 - L2 LINE L2 -3 3310 2677 189 310 0 17 chr2 120589999 120590057 -130097797 + L2 LINE L2 3237 3293 -20 * 204 292 156 0 chr2 120590738 120590834 -130097020 + L2 LINE L2 3202 3312 -1 596 274 93 5 chr2 120593150 120593365 -130094489 - MIR SINE MIR -1 261 28 235 276 41 41 chr2 120593461 120593559 -130094295 - MER5A DNA MER1_type 0 189 92 * 279 220 100 70 chr2 120593488 120593588 -130094266 + MER5A DNA MER1_type 38 140 -49 266 339 55 0 chr2 120593554 120593663 -130094191 + L2 LINE L2 3155 3269 -3 * 202 284 224 9 chr2 120594089 120594205 -130093649 + MIR3 SINE MIR 1 141 -67 224 305 109 8 chr2 120594362 120594490 -130093364 - MIR3 SINE MIR -38 170 30 226 352 74 0 chr2 120595149 120595257 -130092597 - MIR SINE MIR -4 258 143 266 184 0 0 chr2 120595374 120595423 -130092431 - L2 LINE L2 -2 3270 3222 2067 119 0 0 chr2 120596184 120596503 -130091351 - AluSx SINE Alu 0 319 1 251 319 44 52 chr2 120597391 120597526 -130090328 + MER5A DNA MER1_type 56 189 0 1012 124 0 0 chr2 120597554 120597699 -130090155 - AluSg/x SINE Alu -50 260 116 282 235 0 0 chr2 120597911 120597979 -130089875 - MIR SINE MIR -146 116 49 246 116 0 0 chr2 120598717 120598760 -130089094 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 384 22 0 0 chr2 120599713 120599758 -130088096 + (TG)n Simple_repeat Simple_repeat 2 46 0 233 250 0 0 chr2 120600681 120600733 -130087121 + MIR SINE MIR 104 155 -107 300 267 27 0 chr2 120601952 120602027 -130085827 - L2 LINE L2 -2 3311 3235 183 318 102 23 chr2 120602936 120603024 -130084830 + L2 LINE L2 3201 3295 -18 390 300 40 0 chr2 120603062 120603162 -130084692 + MER91C DNA MER1_type 3 106 -34 436 204 32 0 chr2 120603901 120603994 -130083860 + MER5A DNA MER1_type 85 180 -9 413 274 89 0 chr2 120604631 120604777 -130083077 - MIR SINE MIR -51 211 53 366 123 0 3 chr2 120605439 120605515 -130082339 - MSTB1 LTR MaLR 0 426 358 342 200 78 0 chr2 120605605 120605695 -130082159 + MIR SINE MIR 42 138 -70 1105 146 61 92 chr2 120605699 120605960 -130081894 - MSTB1 LTR MaLR -179 253 1 246 190 0 17 chr2 120606110 120606168 -130081686 - L1MB8 LINE L1 0 6178 6122 3450 170 73 4 chr2 120606184 120606988 -130080866 - L1MB7 LINE L1 -158 6026 5173 241 299 65 0 chr2 120607243 120607350 -130080504 - L2 LINE L2 -15 3257 3144 1734 72 0 0 chr2 120607634 120607856 -130079998 - AluSg/x SINE Alu -5 307 86 191 315 126 28 chr2 120607973 120608116 -130079738 + L2 LINE L2 2929 3085 -187 1071 132 0 42 chr2 120608417 120608607 -130079247 + AluSc SINE Alu 127 308 -1 245 213 16 16 chr2 120609403 120609464 -130078390 + (CA)n Simple_repeat Simple_repeat 2 62 0 724 273 30 0 chr2 120609506 120609704 -130078150 - MIR SINE MIR -45 217 14 253 303 92 0 chr2 120609924 120610066 -130077788 - MIR3 SINE MIR -3 205 51 193 280 194 0 chr2 120610447 120610540 -130077314 + L2 LINE L2 3144 3254 -18 922 241 69 0 chr2 120611021 120611237 -130076617 - MIR SINE MIR -12 250 20 511 332 13 16 chr2 120611762 120611994 -130075860 + MIR SINE MIR 18 247 -15 319 291 78 0 chr2 120612096 120612199 -130075655 - MIR SINE MIR -63 145 35 926 219 126 60 chr2 120612373 120612579 -130075275 - Charlie4a DNA MER1_type -1492 469 278 1570 159 36 11 chr2 120612579 120612912 -130074942 - AluJo SINE Alu 0 340 1 926 219 126 60 chr2 120612912 120613102 -130074752 - Charlie4a DNA MER1_type -1683 278 46 180 0 0 0 chr2 120613246 120613266 -130074588 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 384 305 70 0 chr2 120614484 120614612 -130073242 - MIR SINE MIR -119 143 7 229 243 43 0 chr2 120615209 120615279 -130072575 - L2 LINE L2 -282 2990 2918 302 262 68 29 chr2 120615287 120615390 -130072464 + MIR SINE MIR 113 219 -43 294 260 71 39 chr2 120615868 120615995 -130071859 + MIR SINE MIR 16 146 -62 896 272 158 16 chr2 120616756 120617504 -130070350 - L2 LINE L2 -73 3240 2381 180 0 0 0 chr2 120617518 120617538 -130070316 + (TTG)n Simple_repeat Simple_repeat 2 21 0 957 240 29 16 chr2 120618273 120618515 -130069339 - MIR SINE MIR -10 252 8 256 196 185 43 chr2 120618565 120618657 -130069197 - L2 LINE L2 -2 3270 3166 201 278 0 0 chr2 120618742 120618796 -130069058 + MIR SINE MIR 87 140 -68 240 290 32 0 chr2 120619281 120619343 -130068511 + L3 LINE CR1 1262 1325 -252 276 258 172 16 chr2 120621513 120621641 -130066213 - MIR3 SINE MIR -31 177 30 230 250 0 0 chr2 120622252 120622300 -130065554 + L2 LINE L2 3216 3263 -9 760 255 20 10 chr2 120622741 120622941 -130064913 + MIR SINE MIR 27 228 -34 266 266 80 9 chr2 120623798 120623911 -130063943 - MER103 DNA DNA 0 166 46 581 157 0 150 chr2 120623980 120624133 -130063721 + FLAM_A SINE Alu 1 130 -3 450 223 21 0 chr2 120624188 120624282 -130063572 - L2 LINE L2 0 3272 3177 260 359 25 0 chr2 120625142 120625271 -130062583 + MIR SINE MIR 43 181 -62 599 286 28 39 chr2 120625449 120625704 -130062150 - MER112 DNA MER1_type -5 255 4 211 390 112 0 chr2 120625854 120626023 -130061831 + MIR SINE MIR 23 210 -52 4220 119 26 3 chr2 120626221 120626842 -130061012 - MER41B LTR ERV1 0 635 1 2368 68 0 46 chr2 120626971 120627295 -130060559 - AluY SINE Alu -2 309 1 517 271 53 24 chr2 120628341 120628511 -130059343 - MER5B DNA MER1_type -1 177 3 2052 78 78 20 chr2 120628675 120628968 -130058886 - AluSp SINE Alu -3 310 1 7113 89 43 14 chr2 120629285 120630084 -130057770 - PABL_A-int LTR ERV1 -247 4768 3925 2054 91 3 7 chr2 120630084 120630371 -130057483 + AluY SINE Alu 16 301 -10 7113 89 43 14 chr2 120630371 120630707 -130057147 - PABL_A-int LTR ERV1 -1090 3925 3600 1354 43 61 4 chr2 120630807 120631054 -130056800 - MER11A LTR ERVK -911 355 1 15172 57 8 4 chr2 120631054 120632996 -130054858 - HERVK11 LTR ERVK 0 7953 6004 231 243 262 19 chr2 120633167 120633270 -130054584 + MIR SINE MIR 97 224 -38 214 302 0 0 chr2 120633553 120633616 -130054238 + MIR SINE MIR 87 149 -113 2785 149 65 34 chr2 120634284 120634848 -130053006 - LTR59 LTR ERV1 -6 591 10 1079 179 104 48 chr2 120634848 120635210 -130052644 + MSTB LTR MaLR 1 424 -2 3148 218 62 25 chr2 120635221 120636009 -130051845 - LTR59-int LTR ERV1 -1 6757 5941 1908 123 3 25 chr2 120636009 120636350 -130051504 - MER4A LTR ERV1 0 664 273 4943 54 168 81 chr2 120636450 120637318 -130050536 + MER11A LTR ERVK 323 1266 0 193 270 32 16 chr2 120637769 120637832 -130050022 + MIR SINE MIR 90 153 -109 27 49 0 0 chr2 120640599 120640640 -130047214 + AT_rich Low_complexity Low_complexity 1 41 0 574 179 15 133 chr2 120641131 120641275 -130046579 + MER3 DNA MER1_type 31 148 -61 2278 116 0 0 chr2 120641275 120641567 -130046287 - AluSg SINE Alu -18 292 1 574 179 15 133 chr2 120641567 120641617 -130046237 + MER3 DNA MER1_type 148 202 -7 1474 92 10 10 chr2 120644213 120644409 -130043445 + MER1B DNA MER1_type 143 338 -1 2152 259 31 32 chr2 120644414 120644718 -130043136 + L1MD1 LINE L1 2615 2918 -3228 2056 132 20 0 chr2 120644718 120645022 -130042832 + AluSx SINE Alu 1 310 -2 2152 259 31 32 chr2 120645022 120645626 -130042228 + L1MD1 LINE L1 2918 3522 -2624 201 74 0 0 chr2 120645647 120645674 -130042180 + (GGAA)n Simple_repeat Simple_repeat 1 27 0 3307 214 23 54 chr2 120645681 120646639 -130041215 + L1MD1 LINE L1 3510 4437 -1709 12868 119 20 25 chr2 120646640 120646902 -130040952 + Tigger1 DNA MER2_type 386 648 -1770 2210 109 0 3 chr2 120646902 120647195 -130040659 + AluSx SINE Alu 11 302 -10 12868 119 20 25 chr2 120647195 120648796 -130039058 + Tigger1 DNA MER2_type 648 2241 -177 2340 96 13 0 chr2 120648796 120649098 -130038756 + AluSq SINE Alu 1 306 -7 12868 119 20 25 chr2 120649098 120649276 -130038578 + Tigger1 DNA MER2_type 2241 2418 0 1954 183 57 21 chr2 120649279 120649751 -130038103 + L1MD1 LINE L1 5687 6177 -65 711 190 141 0 chr2 120649808 120649989 -130037865 + MER44D DNA MER2_type 31 507 -102 1484 198 91 13 chr2 120649989 120650307 -130037547 - MER2 DNA MER2_type 0 345 3 357 122 281 24 chr2 120650309 120650391 -130037463 + MER44D DNA MER2_type 502 604 -1 496 161 0 0 chr2 120650496 120650577 -130037277 - AluJ/FRAM SINE Alu -17 295 215 2221 115 81 3 chr2 120650631 120650988 -130036866 + Tigger2 DNA MER2_type 2334 2718 0 2539 65 0 0 chr2 120651740 120652048 -130035806 + AluY SINE Alu 1 308 -3 1892 157 29 0 chr2 120652341 120652622 -130035232 + AluJb SINE Alu 1 289 -23 493 127 32 8 chr2 120652623 120652749 -130035105 + GA-rich Low_complexity Low_complexity 2 130 0 30 0 0 0 chr2 120652818 120652848 -130035006 + AT_rich Low_complexity Low_complexity 1 30 0 330 198 141 41 chr2 120653125 120653246 -130034608 - L2 LINE L2 -1 3312 3180 30 27 0 0 chr2 120653273 120653310 -130034544 + AT_rich Low_complexity Low_complexity 1 37 0 1486 168 22 56 chr2 120653394 120653715 -130034139 + AluJo SINE Alu 1 310 -2 265 273 49 63 chr2 120654439 120654582 -130033272 + L2 LINE L2 2726 2866 -448 352 258 21 0 chr2 120654763 120654860 -130032994 + L2 LINE L2 3197 3295 -18 188 161 0 0 chr2 120654862 120654893 -130032961 - L2 LINE L2 -3 3269 3239 1629 83 8 38 chr2 120655710 120655950 -130031904 - AluSx SINE Alu -44 268 36 21 0 0 0 chr2 120656198 120656219 -130031635 + AT_rich Low_complexity Low_complexity 1 21 0 405 141 0 0 chr2 120656360 120656431 -130031423 + (CA)n Simple_repeat Simple_repeat 1 71 0 1096 92 118 0 chr2 120656564 120656717 -130031137 + AluSg/x SINE Alu 132 302 -8 279 277 29 53 chr2 120657328 120657534 -130030320 + L1ME4a LINE L1 4458 4658 -1488 333 283 78 30 chr2 120657825 120657991 -130029863 + L1ME4a LINE L1 4883 5056 -1090 525 300 104 43 chr2 120658078 120658425 -130029429 + L1ME4a LINE L1 5282 5649 -2159 490 207 25 130 chr2 120658436 120658695 -130029159 + L1MC5 LINE L1 6925 7153 -808 2371 70 23 0 chr2 120658695 120658994 -130028860 + AluY SINE Alu 1 306 -5 490 207 25 130 chr2 120658994 120659019 -130028835 + L1MC5 LINE L1 7153 7179 -782 * 4291 182 36 33 chr2 120659015 120659922 -130027932 + L1MD2 LINE L1 5449 6358 -1 881 216 200 31 chr2 120660070 120660495 -130027359 + L1MC5 LINE L1 7323 7819 -142 1623 150 15 80 chr2 120660505 120660664 -130027190 + AluJo SINE Alu 1 130 -182 771 162 26 7 chr2 120660664 120660818 -130027036 - L1MD2 LINE L1 -8 6351 6195 1623 150 15 80 chr2 120660818 120660985 -130026869 + AluJo SINE Alu 130 306 -6 566 318 19 55 chr2 120661098 120661319 -130026535 + L1ME4a LINE L1 5671 5898 -223 2292 106 3 0 chr2 120661319 120661620 -130026234 + AluSq SINE Alu 1 302 -11 1652 168 34 10 chr2 120661627 120661925 -130025929 + AluJb SINE Alu 1 305 -7 566 318 19 55 chr2 120661925 120662116 -130025738 + L1ME4a LINE L1 5904 6076 -45 695 180 47 0 chr2 120662848 120662976 -130024878 - AluJo SINE Alu -177 135 2 34 24 0 0 chr2 120663140 120663181 -130024673 + AT_rich Low_complexity Low_complexity 1 41 0 3137 198 23 30 chr2 120663910 120664383 -130023471 + MER82 DNA MER2_type 1 469 -184 2030 132 0 30 chr2 120664383 120664686 -130023168 + AluJb SINE Alu 1 294 -18 3137 198 23 30 chr2 120664686 120664870 -130022984 + MER82 DNA MER2_type 469 653 0 1022 230 55 57 chr2 120665278 120665682 -130022172 + MER57A LTR ERV1 1 403 0 2227 109 3 22 chr2 120666466 120666777 -130021077 - AluSx SINE Alu -7 305 1 1186 191 151 0 chr2 120666799 120667071 -130020783 + L1MA6 LINE L1 5983 6295 -5 2025 94 7 49 chr2 120667142 120667449 -130020405 + AluSx SINE Alu 1 294 -18 204 217 0 0 chr2 120669244 120669290 -130018564 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 1773 138 3 40 chr2 120669292 120669589 -130018265 - AluJo SINE Alu -26 286 1 352 224 51 10 chr2 120669750 120669848 -130018006 - MIR SINE MIR -112 150 49 203 229 21 0 chr2 120670412 120670460 -130017394 + (TA)n Simple_repeat Simple_repeat 1 49 0 323 194 65 11 chr2 120672935 120673028 -130014826 - MER5A DNA MER1_type -83 106 9 546 213 43 24 chr2 120673853 120674017 -130013837 - MER20B DNA MER1_type 0 783 617 24 53 0 0 chr2 120674030 120674068 -130013786 + AT_rich Low_complexity Low_complexity 1 38 0 303 28 0 0 chr2 120674155 120674191 -130013663 + (TG)n Simple_repeat Simple_repeat 2 37 0 572 314 99 33 chr2 120674205 120674873 -130012981 - L2 LINE L2 -1327 1987 1276 323 237 0 0 chr2 120675506 120675565 -130012289 + L1MEd LINE L1 678 736 -5469 469 294 139 25 chr2 120675759 120676486 -130011368 + L1MEd LINE L1 1021 1830 -4566 2292 105 3 0 chr2 120676536 120676832 -130011022 + AluSp SINE Alu 1 297 -16 1730 271 59 2 chr2 120677328 120677737 -130010117 - MER70B LTR ERVL -143 435 4 369 252 134 76 chr2 120677741 120678435 -130009419 + L1MEd LINE L1 2204 2856 -3359 1861 141 14 28 chr2 120678435 120678726 -130009128 - AluJo SINE Alu -25 287 1 369 252 134 76 chr2 120678726 120679275 -130008579 + L1MEd LINE L1 2856 3520 -2695 1712 144 46 33 chr2 120679286 120679592 -130008262 + AluJo SINE Alu 1 310 -2 584 204 276 19 chr2 120679645 120679740 -130008114 + L1M4 LINE L1 2126 2195 -3951 764 187 0 15 chr2 120679740 120679874 -130007980 + FLAM_A SINE Alu 2 133 0 584 204 276 19 chr2 120679874 120679907 -130007947 + L1M4 LINE L1 2195 2218 -3928 2056 147 0 3 chr2 120679907 120680213 -130007641 + AluY SINE Alu 1 305 -6 584 204 276 19 chr2 120680213 120680406 -130007448 + L1M4 LINE L1 2218 2531 -3615 1002 126 0 0 chr2 120680408 120680543 -130007311 - AluYb8 SINE Alu -183 135 1 420 175 0 0 chr2 120680569 120680649 -130007205 - FLAM_A SINE Alu 0 142 63 679 197 7 0 chr2 120680665 120680802 -130007052 + L1M4 LINE L1 2548 2685 -3461 1334 160 9 0 chr2 120680802 120681014 -130006840 - AluJo SINE Alu -10 302 89 837 149 8 0 chr2 120681032 120681153 -130006701 - FLAM_C SINE Alu -20 123 2 3815 68 101 0 chr2 120681172 120681688 -130006166 - L1PA6 LINE L1 0 6154 5587 1532 226 46 9 chr2 120681688 120682143 -130005711 + L1M4 LINE L1 2677 3148 -2998 242 370 52 0 chr2 120682117 120682271 -130005583 + L1ME2 LINE L1 5540 5701 -469 * 2299 105 10 0 chr2 120682276 120682571 -130005283 + AluSx SINE Alu 1 298 -14 2544 144 18 26 chr2 120682851 120683303 -130004551 + MER83 LTR ERV1 1 448 0 2111 123 24 0 chr2 120684184 120684477 -130003377 - AluSx SINE Alu -12 300 1 443 278 148 17 chr2 120684510 120684740 -130003114 + L1ME2 LINE L1 5688 5947 -223 360 298 50 0 chr2 120685187 120685308 -130002546 - L2 LINE L2 0 3272 3146 3530 72 13 0 chr2 120685368 120685824 -130002030 + L1PA8 LINE L1 5706 6167 -5 2388 105 0 3 chr2 120686357 120686671 -130001183 - AluSq SINE Alu 0 313 1 2296 85 0 0 chr2 120687173 120687489 -130000365 - AluSx SINE Alu 0 316 1 467 222 94 89 chr2 120687525 120687559 -130000295 + MIR SINE MIR 2 34 -228 1518 177 30 30 chr2 120687559 120687864 -129999990 + AluJb SINE Alu 1 305 -7 467 222 94 89 chr2 120687864 120688009 -129999845 + MIR SINE MIR 34 182 -80 1620 117 66 0 chr2 120688045 120688301 -129999553 - L1PA14 LINE L1 0 6161 5889 685 185 0 7 chr2 120688314 120688449 -129999405 + AluJb SINE Alu 179 312 0 623 228 95 61 chr2 120688551 120688814 -129999040 + MER113 DNA MER1_type? 154 425 -96 1296 117 0 16 chr2 120688892 120689080 -129998774 + AluSg/x SINE Alu 120 304 -6 2333 109 0 0 chr2 120690367 120690679 -129997175 - AluSx SINE Alu 0 312 1 368 265 82 0 chr2 120691830 120691928 -129995926 + MIR SINE MIR 87 192 -70 2432 89 0 0 chr2 120692850 120693152 -129994702 + AluSc SINE Alu 1 302 -7 321 349 43 43 chr2 120693334 120693749 -129994105 - L2 LINE L2 -359 2955 2541 707 218 74 15 chr2 120693922 120694118 -129993736 + MIR SINE MIR 52 259 -3 556 207 44 119 chr2 120694834 120695061 -129992793 + L1ME2 LINE L1 5945 6154 -10 2131 57 46 0 chr2 120695061 120695324 -129992530 - AluY SINE Alu -14 297 23 298 259 81 70 chr2 120695415 120695600 -129992254 + HAL1 LINE L1 50 236 -2271 2456 71 0 0 chr2 120696308 120696603 -129991251 + AluSc SINE Alu 1 295 -14 2305 107 0 0 chr2 120697450 120697759 -129990095 + AluSx SINE Alu 1 309 -3 338 232 43 92 chr2 120698798 120698962 -129988892 - MIR SINE MIR -99 163 8 2226 116 0 3 chr2 120699655 120699979 -129987875 + AluSx SINE Alu 1 312 0 560 319 44 12 chr2 120699994 120700301 -129987553 - L2 LINE L2 0 3272 2913 2124 256 224 49 chr2 120700378 120702307 -129985547 - L2 LINE L2 -571 2743 477 210 237 0 0 chr2 120703291 120703329 -129984525 + (CATG)n Simple_repeat Simple_repeat 3 40 0 200 252 210 25 chr2 120703826 120703945 -129983909 + MIR SINE MIR 6 146 -62 354 333 30 8 chr2 120703985 120704117 -129983737 - MIR SINE MIR -11 251 117 201 192 135 0 chr2 120704142 120704194 -129983660 + MIR SINE MIR 176 234 -28 1796 150 38 0 chr2 120704408 120704695 -129983159 - AluJb SINE Alu -12 300 3 853 154 0 8 chr2 120704885 120705008 -129982846 - FLAM_A SINE Alu -11 122 1 657 283 150 25 chr2 120705052 120705653 -129982201 - L1M4 LINE L1 -1024 5122 4447 398 296 94 53 chr2 120705710 120705861 -129981993 - L1M4 LINE L1 -1922 4224 4081 1672 152 0 8 chr2 120705861 120706118 -129981736 - AluJb SINE Alu -57 255 1 398 296 94 53 chr2 120706118 120706382 -129981472 - L1M4 LINE L1 -2065 4081 3792 583 205 29 10 chr2 120706399 120706539 -129981315 - MLT1C LTR MaLR -50 413 247 21 0 0 0 chr2 120706687 120706708 -129981146 + AT_rich Low_complexity Low_complexity 1 21 0 381 215 88 79 chr2 120706940 120707118 -129980736 + MIR SINE MIR 25 206 -56 2131 143 22 17 chr2 120707460 120707817 -129980037 - MER47A DNA MER2_type -1 365 7 316 299 29 22 chr2 120707835 120707972 -129979882 + L2 LINE L2 2898 3035 -237 261 0 0 0 chr2 120707976 120708005 -129979849 + (CA)n Simple_repeat Simple_repeat 2 30 0 246 95 0 0 chr2 120712824 120712866 -129974988 + (A)n Simple_repeat Simple_repeat 1 42 0 2443 84 3 0 chr2 120714057 120714355 -129973499 + AluSx SINE Alu 1 299 -13 233 373 70 6 chr2 120714871 120715029 -129972825 - MIR SINE MIR -77 185 18 270 219 81 94 chr2 120715048 120715208 -129972646 - L1ME4a LINE L1 -15 6106 5949 2175 114 3 7 chr2 120715255 120715562 -129972292 + AluSx SINE Alu 1 306 -6 353 264 0 0 chr2 120715891 120715963 -129971891 - MIR SINE MIR -165 97 26 619 205 25 16 chr2 120715965 120716087 -129971767 - FLAM_C SINE Alu -19 124 2 2162 123 0 43 chr2 120716291 120716617 -129971237 - AluSx SINE Alu 0 312 1 245 311 77 52 chr2 120716697 120717063 -129970791 - L1M4 LINE L1 -982 5164 4790 1852 124 0 8 chr2 120717525 120717784 -129970070 + AluSx SINE Alu 40 296 -16 394 319 63 5 chr2 120718808 120719015 -129968839 + MIR SINE MIR 24 242 -20 1871 168 0 7 chr2 120719143 120719446 -129968408 - AluJb SINE Alu -11 301 1 2321 94 3 3 chr2 120719642 120719941 -129967913 + AluY SINE Alu 1 299 -12 1652 172 0 28 chr2 120720222 120720513 -129967341 + AluJo SINE Alu 21 303 -9 464 185 104 30 chr2 120720634 120720769 -129967085 - L1ME4a LINE L1 -2281 5527 5383 189 0 0 0 chr2 120720911 120720932 -129966922 + (T)n Simple_repeat Simple_repeat 1 21 0 409 227 31 49 chr2 120721078 120721241 -129966613 - L1MC5 LINE L1 -7 7954 7795 359 308 95 44 chr2 120721296 120721748 -129966106 - L1ME4a LINE L1 -1185 4961 4487 246 197 23 28 chr2 120721777 120721855 -129965999 - L1ME2 LINE L1 -1 6161 6086 240 35 0 0 chr2 120722076 120722105 -129965749 + (CA)n Simple_repeat Simple_repeat 2 30 0 662 200 8 0 chr2 120723261 120723381 -129964473 + MLT1D LTR MaLR 343 463 -42 23 33 0 0 chr2 120723381 120723411 -129964443 + AT_rich Low_complexity Low_complexity 1 30 0 285 235 29 0 chr2 120723556 120723624 -129964230 - L2 LINE L2 -5 3308 3239 218 231 58 0 chr2 120724297 120724349 -129963505 - L2 LINE L2 0 3272 3218 2036 130 17 0 chr2 120725429 120725721 -129962133 - AluSx SINE Alu -15 297 1 25 31 0 0 chr2 120728012 120728044 -129959810 + AT_rich Low_complexity Low_complexity 1 32 0 2243 140 64 0 chr2 120728259 120728601 -129959253 - THE1B LTR MaLR 0 364 1 183 80 0 0 chr2 120729007 120729032 -129958822 + (TA)n Simple_repeat Simple_repeat 1 25 0 713 232 28 131 chr2 120729034 120729119 -129958735 + L1MC4a LINE L1 5591 5683 -2125 1802 179 0 3 chr2 120729119 120729404 -129958450 - AluJb SINE Alu -28 284 1 713 232 28 131 chr2 120729404 120729715 -129958139 + L1MC4a LINE L1 5683 5946 -1862 1637 149 24 28 chr2 120729927 120730215 -129957639 - AluJo SINE Alu -25 287 1 239 0 32 0 chr2 120730526 120730557 -129957297 + (CAAAA)n Simple_repeat Simple_repeat 5 36 0 416 310 36 27 chr2 120730572 120730868 -129956986 - MER102a DNA MER1_type -12 318 1 418 238 57 9 chr2 120731414 120731519 -129956335 + L2 LINE L2 3204 3313 0 270 297 144 0 chr2 120731516 120731627 -129956227 - MIR3 SINE MIR -47 161 35 * 10038 230 78 29 chr2 120731795 120731950 -129955904 - L1MEc LINE L1 -428 5807 5661 1630 153 37 24 chr2 120731950 120732091 -129955763 + AluJo SINE Alu 1 139 -173 2217 91 7 0 chr2 120732091 120732377 -129955477 + AluSx SINE Alu 18 305 -7 1630 153 37 24 chr2 120732377 120732530 -129955324 + AluJo SINE Alu 139 299 -13 10038 230 78 29 chr2 120732530 120734304 -129953550 - L1MEc LINE L1 -574 5661 3975 2278 176 25 42 chr2 120734304 120734735 -129953119 + MSTB LTR MaLR 1 424 -2 10038 230 78 29 chr2 120734735 120734926 -129952928 - L1MEc LINE L1 -2260 3975 3795 721 231 0 0 chr2 120734926 120735056 -129952798 - FLAM_A SINE Alu -3 130 1 10038 230 78 29 chr2 120735056 120736960 -129950894 - L1MEc LINE L1 -2440 3795 1630 2001 101 83 11 chr2 120736988 120737266 -129950588 + AluSx SINE Alu 1 298 -14 4484 237 82 37 chr2 120737285 120738757 -129949097 - L1MEc LINE L1 -4850 1546 9 294 205 47 71 chr2 120739334 120739461 -129948393 - L1MC4 LINE L1 -1 8041 7918 1873 146 7 10 chr2 120739627 120739928 -129947926 - AluJb SINE Alu -12 300 1 928 248 112 22 chr2 120740136 120740450 -129947404 + L1MC4 LINE L1 7109 7450 -592 356 230 8 103 chr2 120740451 120740577 -129947277 - MER58B DNA MER1_type -4 337 224 691 208 39 31 chr2 120740617 120740821 -129947033 + L1MC4 LINE L1 7377 7635 -231 799 211 0 0 chr2 120740856 120740989 -129946865 - FLAM_C SINE Alu 0 133 1 2065 210 98 85 chr2 120740990 120741300 -129946554 + L1MC3 LINE L1 5857 6162 -1623 1623 177 7 20 chr2 120741300 120741600 -129946254 + AluJb SINE Alu 1 296 -16 2065 210 98 85 chr2 120741600 120742803 -129945051 + L1MC3 LINE L1 6162 7392 -393 2072 126 17 0 chr2 120743055 120743348 -129944506 + AluSx SINE Alu 1 298 -14 204 196 36 0 chr2 120743365 120743421 -129944433 + (TA)n Simple_repeat Simple_repeat 2 59 0 23 0 0 0 chr2 120743618 120743641 -129944213 + AT_rich Low_complexity Low_complexity 1 23 0 570 243 58 91 chr2 120743881 120743982 -129943872 + MIR SINE MIR 2 105 -157 1682 147 3 55 chr2 120743982 120744305 -129943549 - AluJo SINE Alu 0 316 9 570 243 58 91 chr2 120744305 120744445 -129943409 + MIR SINE MIR 105 236 -26 2140 121 41 49 chr2 120745075 120745462 -129942392 + MER34B LTR ERV1 1 384 -181 200 185 56 0 chr2 120745462 120745516 -129942338 + GA-rich Low_complexity Low_complexity 1 57 0 2522 143 76 2 chr2 120745520 120745941 -129941913 - LTR47A LTR ERVL 0 452 1 610 200 17 0 chr2 120745944 120746059 -129941795 + L1MC4 LINE L1 7926 8042 0 262 247 27 0 chr2 120746080 120746153 -129941701 + L1ME2 LINE L1 6082 6156 -8 23 0 0 0 chr2 120746510 120746533 -129941321 + AT_rich Low_complexity Low_complexity 1 23 0 389 325 43 0 chr2 120747575 120747692 -129940162 - MIR SINE MIR -120 142 21 423 0 0 0 chr2 120747697 120747744 -129940110 + (CA)n Simple_repeat Simple_repeat 2 48 0 809 168 0 0 chr2 120748118 120748249 -129939605 - FLAM_C SINE Alu -1 132 2 321 263 90 58 chr2 120748272 120748428 -129939426 - MIR SINE MIR -21 241 81 1093 289 62 25 chr2 120748672 120749239 -129938615 + L1ME3 LINE L1 5353 5940 -222 2141 113 3 3 chr2 120749270 120749581 -129938273 + AluSx SINE Alu 1 311 -1 561 103 0 35 chr2 120749775 120749862 -129937992 - MER4-int LTR ERV1 -1859 4404 4321 * 1210 148 17 39 chr2 120749861 120750175 -129937679 - MER4-int LTR ERV1 -5797 801 355 2153 100 7 0 chr2 120750523 120750804 -129937050 - AluSg SINE Alu -27 283 1 232 267 124 29 chr2 120751142 120751247 -129936607 + MLT1I LTR MaLR 98 212 -197 252 250 152 37 chr2 120751297 120751461 -129936393 + MLT1H LTR MaLR 354 536 -13 385 233 171 71 chr2 120751626 120751687 -129936167 - MLT1J LTR MaLR -247 264 210 2024 206 56 16 chr2 120751687 120752173 -129935681 + MLT1D LTR MaLR 1 505 0 385 233 171 71 chr2 120752173 120752351 -129935503 - MLT1J LTR MaLR -300 211 1 347 319 131 8 chr2 120752351 120752571 -129935283 + MLT1K LTR MaLR 172 427 -161 1624 203 178 37 chr2 120752571 120753089 -129934765 - MLT1G1 LTR MaLR 0 595 5 1762 116 106 3 chr2 120753767 120754051 -129933803 + AluSp SINE Alu 1 313 0 240 219 27 14 chr2 120754324 120754397 -129933457 - L1ME4a LINE L1 -189 5932 5859 274 251 162 86 chr2 120754399 120754500 -129933354 - L1ME4a LINE L1 -307 5814 5722 2356 35 0 39 chr2 120754500 120754786 -129933068 - AluY SINE Alu -10 301 27 274 251 162 86 chr2 120754786 120754999 -129932855 - L1ME4a LINE L1 -399 5722 5476 189 121 0 0 chr2 120755129 120755162 -129932692 + (TC)n Simple_repeat Simple_repeat 2 34 0 883 117 7 35 chr2 120755897 120756042 -129931812 - FLAM_C SINE Alu -2 141 1 943 222 35 34 chr2 120756225 120756502 -129931352 - L1ME2 LINE L1 -18 6144 5867 5742 203 37 59 chr2 120756629 120756808 -129931046 + L1M4 LINE L1 3611 3792 -2354 1635 157 0 4 chr2 120756808 120757088 -129930766 + AluJb SINE Alu 36 314 0 3707 145 37 45 chr2 120757094 120757790 -129930064 - LTR8 LTR ERV1 0 691 1 5742 203 37 59 chr2 120757790 120759154 -129928700 + L1M4 LINE L1 3797 5128 -1018 444 19 0 0 chr2 120759154 120759207 -129928647 + (TG)n Simple_repeat Simple_repeat 2 54 0 952 113 0 0 chr2 120759208 120759332 -129928522 - FLAM_C SINE Alu -19 124 1 244 250 355 7 chr2 120759643 120759795 -129928059 + MIR SINE MIR 46 250 -12 2128 145 0 0 chr2 120760388 120760699 -129927155 - AluSx SINE Alu -1 311 1 230 290 229 30 chr2 120760708 120760839 -129927015 + L2 LINE L2 3115 3271 -1 1316 118 63 4 chr2 120760967 120761205 -129926649 + MER44D DNA MER2_type 8 529 -80 25 31 0 0 chr2 120761212 120761244 -129926610 + AT_rich Low_complexity Low_complexity 1 32 0 954 235 92 11 chr2 120761288 120761374 -129926480 - MLT1J2 LTR MaLR -156 294 216 2164 120 7 0 chr2 120761374 120761673 -129926181 - AluSx SINE Alu -11 301 1 954 235 92 11 chr2 120761673 120761858 -129925996 - MLT1J2 LTR MaLR -234 216 1 904 207 17 0 chr2 120762161 120762335 -129925519 + MER58A DNA MER1_type 37 213 -11 2334 100 10 6 chr2 120762426 120762737 -129925117 - AluSx SINE Alu 0 312 1 2218 84 39 0 chr2 120762744 120763029 -129924825 - AluSc SINE Alu -13 296 1 183 250 0 0 chr2 120763156 120763208 -129924646 + GA-rich Low_complexity Low_complexity 3 54 0 363 193 9 44 chr2 120763234 120763348 -129924506 - L1PB3 LINE L1 -2 6152 6043 241 280 73 56 chr2 120763746 120763978 -129923876 - L1MC4 LINE L1 -1039 7003 6768 1693 201 10 0 chr2 120764015 120764309 -129923545 - AluJo SINE Alu -15 297 1 194 126 69 35 chr2 120765016 120765103 -129922751 + (CAGGC)n Simple_repeat Simple_repeat 5 94 0 2039 130 9 32 chr2 120765773 120766089 -129921765 - AluSq SINE Alu -4 309 1 207 114 0 0 chr2 120766180 120766215 -129921639 + (CA)n Simple_repeat Simple_repeat 1 35 0 525 226 36 15 chr2 120766743 120766880 -129920974 - MIR SINE MIR -95 167 28 240 154 77 46 chr2 120767319 120767384 -129920470 + L1MC3 LINE L1 7309 7375 -410 * 441 233 164 35 chr2 120767352 120767584 -129920270 + L1MC5 LINE L1 7292 7553 -408 1717 122 97 0 chr2 120767612 120767859 -129919995 - AluSx SINE Alu -18 294 24 1316 221 71 7 chr2 120767859 120768140 -129919714 - MER21B LTR ERV1 -109 754 456 2346 100 0 3 chr2 120768153 120768454 -129919400 - AluSq SINE Alu -9 304 5 1741 214 33 32 chr2 120768459 120768872 -129918982 + LTR56 LTR ERV1 10 383 -54 2030 157 3 0 chr2 120768872 120769178 -129918676 - AluJb SINE Alu -5 307 1 1741 214 33 32 chr2 120769178 120769234 -129918620 + LTR56 LTR ERV1 383 437 0 1535 205 15 9 chr2 120769234 120769631 -129918223 - MER21B LTR ERV1 -401 462 9 1714 169 30 27 chr2 120769635 120769931 -129917923 + AluJo SINE Alu 1 297 -15 531 271 40 0 chr2 120769967 120770118 -129917736 - MIR SINE MIR -21 241 85 1023 174 22 0 chr2 120770172 120770356 -129917498 + MER5A DNA MER1_type 1 188 -1 1850 145 44 27 chr2 120771184 120771480 -129916374 - AluSx SINE Alu -10 302 2 301 250 14 0 chr2 120771501 120771573 -129916281 - L2 LINE L2 0 3272 3200 276 277 230 0 chr2 120771918 120772066 -129915788 - MIR SINE MIR -7 255 74 347 209 105 0 chr2 120772705 120772791 -129915063 - MER45 DNA AcHobo -1486 95 1 415 230 63 48 chr2 120773301 120773427 -129914427 + MLT1G LTR MaLR 169 296 -294 248 305 29 6 chr2 120773561 120773706 -129914148 - MER69 DNA AcHobo -4 2522 31 1469 214 36 33 chr2 120773754 120774118 -129913736 - MLT1A1 LTR MaLR 0 365 1 1471 135 8 37 chr2 120775639 120775883 -129911971 + Tigger4(Zombi) DNA MER2_type 2495 2731 0 509 238 29 64 chr2 120776198 120776289 -129911565 + MIR SINE MIR 87 171 -91 2616 27 7 10 chr2 120776289 120776589 -129911265 + AluSc SINE Alu 1 299 -10 509 238 29 64 chr2 120776589 120776669 -129911185 + MIR SINE MIR 171 252 -10 10344 135 18 6 chr2 120776910 120779650 -129908204 - L1MA3 LINE L1 -1 6304 3531 2208 73 56 3 chr2 120779714 120780002 -129907852 - AluY SINE Alu -8 303 1 17081 125 29 13 chr2 120780003 120780519 -129907335 - Tigger4(Zombi) DNA MER2_type -7 2724 2218 1283 170 19 48 chr2 120780519 120780830 -129907024 - AluJo SINE Alu -10 302 1 17081 125 29 13 chr2 120780830 120781303 -129906551 - Tigger4(Zombi) DNA MER2_type -513 2218 1754 183 42 0 0 chr2 120781303 120781327 -129906527 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 17081 125 29 13 chr2 120781327 120782979 -129904875 - Tigger4(Zombi) DNA MER2_type -977 1754 41 967 153 6 25 chr2 120782981 120783138 -129904716 + FRAM SINE Alu 6 159 -17 432 145 0 0 chr2 120783151 120783213 -129904641 - Tigger4(Zombi) DNA MER2_type -2669 62 1 520 208 62 84 chr2 120783589 120783725 -129904129 - MER5B DNA MER1_type 0 178 45 1444 154 44 66 chr2 120783725 120784044 -129903810 + AluJo SINE Alu 1 312 0 520 208 62 84 chr2 120784044 120784085 -129903769 - MER5B DNA MER1_type -133 45 5 1149 216 42 0 chr2 120784500 120784648 -129903206 - AluJo SINE Alu -30 282 119 363 44 0 0 chr2 120784648 120784693 -129903161 + (CA)n Simple_repeat Simple_repeat 2 46 0 1149 216 42 0 chr2 120784693 120784780 -129903074 - AluJo SINE Alu -193 119 37 305 164 0 0 chr2 120784793 120784854 -129903000 + MER5B DNA MER1_type 116 176 -2 2831 182 99 32 chr2 120784930 120785257 -129902597 + LTR48 LTR ERV1 1 305 -482 2270 107 7 7 chr2 120785257 120785269 -129902585 - AluSp SINE Alu -1 312 301 288 0 0 0 chr2 120785269 120785301 -129902553 + (TG)n Simple_repeat Simple_repeat 1 32 0 2270 107 7 7 chr2 120785301 120785598 -129902256 - AluSp SINE Alu -11 302 3 2831 182 99 32 chr2 120785598 120785956 -129901898 + LTR48 LTR ERV1 305 732 -55 350 230 100 131 chr2 120785985 120786252 -129901602 - MER34 LTR ERV1 -4 774 400 1601 196 3 21 chr2 120786337 120786622 -129901232 + AluJo SINE Alu 3 282 -30 1591 173 26 90 chr2 120786702 120787090 -129900764 + MER34B LTR ERV1 12 374 -191 2079 171 35 44 chr2 120787090 120787127 -129900727 - MSTB1 LTR MaLR -2 430 394 2340 91 0 3 chr2 120787127 120787424 -129900430 + AluY SINE Alu 3 298 -13 2079 171 35 44 chr2 120787424 120787820 -129900034 - MSTB1 LTR MaLR -38 394 1 8795 176 45 10 chr2 120787820 120788159 -129899695 - MSTB1-int LTR MaLR 0 1651 1325 2224 117 91 45 chr2 120788159 120788577 -129899277 - LTR23 LTR ERV1 0 437 1 8795 176 45 10 chr2 120788577 120789831 -129898023 - MSTB1-int LTR MaLR -326 1325 3 2325 135 69 17 chr2 120789831 120790239 -129897615 - MSTB1 LTR MaLR -2 430 2 470 136 48 96 chr2 120790294 120790419 -129897435 + MER34B LTR ERV1 445 563 -2 410 236 93 127 chr2 120791127 120791386 -129896468 + MER112 DNA MER1_type 6 255 -5 403 274 59 11 chr2 120792447 120792633 -129895221 - MER102b DNA MER1_type -6 335 141 1795 243 125 10 chr2 120792634 120793211 -129894643 + LTR48B LTR ERV1 2 644 0 1038 172 0 17 chr2 120793278 120793452 -129894402 + AluJb SINE Alu 137 307 -5 235 211 200 21 chr2 120795169 120795264 -129892590 - MIR SINE MIR -59 203 92 255 284 121 33 chr2 120795313 120795528 -129892326 - L2 LINE L2 -49 3264 3031 250 263 61 30 chr2 120795870 120795969 -129891885 + L2 LINE L2 3212 3313 0 * 980 247 180 12 chr2 120795950 120796294 -129891560 - L2 LINE L2 0 3313 2912 712 207 50 11 chr2 120796732 120796926 -129890928 - LTR49 LTR ERV1 0 595 416 351 148 216 0 chr2 120796900 120796988 -129890866 - LTR29 LTR ERV1 -198 424 318 * 988 142 98 0 chr2 120797014 120797197 -129890657 - LTR29 LTR ERV1 -421 201 1 463 160 336 0 chr2 120797868 120797988 -129889866 + MER5A DNA MER1_type 1 162 -27 203 266 86 62 chr2 120797988 120798159 -129889695 + MIR SINE MIR 4 177 -31 2079 85 7 46 chr2 120798484 120798791 -129889063 + AluSx SINE Alu 1 295 -17 459 186 72 0 chr2 120800910 120801007 -129886847 + MIR SINE MIR 88 191 -71 218 324 0 0 chr2 120801047 120801115 -129886739 + CT-rich Low_complexity Low_complexity 4 71 0 378 261 112 31 chr2 120802549 120802710 -129885144 + L3 LINE CR1 1388 1561 -16 331 236 236 0 chr2 120803070 120803180 -129884674 + MIR SINE MIR 81 216 -46 1649 204 8 8 chr2 120803378 120803730 -129884124 + L1MB5 LINE L1 5823 6174 0 333 296 28 14 chr2 120803822 120803964 -129883890 - MIR3 SINE MIR -62 146 3 301 340 42 7 chr2 120805157 120805301 -129882553 - MIR SINE MIR -46 216 68 318 241 143 30 chr2 120806861 120806994 -129880860 - MIR SINE MIR -83 179 32 242 293 0 13 chr2 120807163 120807238 -129880616 - L2 LINE L2 -73 3199 3126 299 246 51 4 chr2 120808442 120808570 -129879284 - MIR SINE MIR -62 146 19 222 270 90 54 chr2 120809159 120809270 -129878584 + MIR SINE MIR 78 192 -70 233 260 41 0 chr2 120809919 120809992 -129877862 - L2 LINE L2 -243 3070 2995 223 321 66 19 chr2 120815244 120815350 -129872504 - MIR SINE MIR -63 145 35 278 186 81 137 chr2 120815372 120815496 -129872358 + MER5A DNA MER1_type 33 149 -40 251 256 256 7 chr2 120816085 120816222 -129871632 - MER102b DNA MER1_type -158 183 13 324 231 218 34 chr2 120816818 120816965 -129870889 + MER5B DNA MER1_type 5 178 0 255 294 47 0 chr2 120817064 120817149 -129870705 - MIR SINE MIR -71 191 103 742 244 74 51 chr2 120817352 120817663 -129870191 + L1ME4a LINE L1 5801 6118 -3 632 242 96 30 chr2 120817643 120817674 -129870180 + L1MC5 LINE L1 7596 7624 -337 * 2291 89 3 3 chr2 120817674 120817966 -129869888 - AluSx SINE Alu -20 292 1 632 242 96 30 chr2 120817966 120818236 -129869618 + L1MC5 LINE L1 7624 7917 -44 301 167 28 69 chr2 120818243 120818315 -129869539 - L1MCa LINE L1 -4362 2064 1996 * 364 274 22 29 chr2 120818253 120818418 -129869436 + L1MC4 LINE L1 6548 6645 -1140 355 307 0 0 chr2 120818380 120818468 -129869386 - L1MC4 LINE L1 -1341 6701 6614 * 313 209 45 0 chr2 120818451 120818518 -129869336 - L1MCa LINE L1 -4362 2064 1995 * 351 330 0 0 chr2 120818475 120818566 -129869288 + L1MC4 LINE L1 6613 6703 -1339 489 285 204 31 chr2 120819540 120819961 -129867893 - HAL1 LINE L1 0 2507 2014 742 139 184 0 chr2 120820694 120820852 -129867002 + MER53 DNA DNA 1 187 -2 2330 114 0 0 chr2 120820961 120821268 -129866586 - AluSx SINE Alu -3 309 3 1594 136 90 69 chr2 120821292 120821668 -129866186 + MLT1B LTR MaLR 3 386 -4 198 216 0 0 chr2 120822133 120822170 -129865684 + L2 LINE L2 3230 3266 -6 342 172 56 16 chr2 120822579 120822675 -129865179 - MER5A DNA MER1_type -73 105 5 632 190 25 0 chr2 120822698 120822819 -129865035 - MER5A DNA MER1_type -48 141 18 191 293 123 0 chr2 120823181 120823287 -129864567 - MIR3 SINE MIR -32 176 58 907 122 11 17 chr2 120823455 120823589 -129864265 + (GGAA)n Simple_repeat Simple_repeat 2 136 -44 252 0 0 0 chr2 120823589 120823617 -129864237 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 907 122 11 17 chr2 120823617 120823662 -129864192 + (GGAA)n Simple_repeat Simple_repeat 136 180 0 249 254 56 21 chr2 120823906 120824048 -129863806 + L1ME LINE L1 5751 5897 -224 1841 169 27 3 chr2 120824199 120824494 -129863360 + AluJb SINE Alu 2 303 -9 336 245 223 14 chr2 120824846 120824985 -129862869 + MER5B DNA MER1_type 9 176 -2 527 277 37 37 chr2 120825952 120826140 -129861714 - Charlie8 DNA MER1_type -2131 286 99 434 284 96 52 chr2 120827447 120827813 -129860041 + HAL1 LINE L1 1 382 -2125 1072 221 7 37 chr2 120827972 120828079 -129859775 + MER33 DNA MER1_type 35 144 -2441 2306 112 0 0 chr2 120828079 120828375 -129859479 + AluSq SINE Alu 1 296 -17 1072 221 7 37 chr2 120828375 120828561 -129859293 + MER33 DNA MER1_type 144 319 -5 2304 268 128 15 chr2 120828709 120829568 -129858286 + HAL1 LINE L1 634 1655 -852 2191 115 20 0 chr2 120829568 120829864 -129857990 - AluSx SINE Alu -8 304 3 2304 268 128 15 chr2 120829864 120830145 -129857709 + HAL1 LINE L1 1655 1903 -604 2238 181 33 18 chr2 120830163 120830616 -129857238 + MLT1C LTR MaLR 8 467 0 613 309 52 116 chr2 120830624 120830936 -129856918 + HAL1 LINE L1 1910 2162 -345 1717 172 0 4 chr2 120830936 120831198 -129856656 + AluJo SINE Alu 1 261 -51 613 309 52 116 chr2 120831198 120831522 -129856332 + HAL1 LINE L1 2162 2505 -2 1977 146 0 39 chr2 120831540 120831849 -129856005 + AluJb SINE Alu 1 297 -15 2469 78 0 0 chr2 120831849 120832144 -129855710 + AluY SINE Alu 1 296 -15 587 180 65 0 chr2 120832269 120832408 -129855446 + MER5A DNA MER1_type 3 150 -39 500 273 198 10 chr2 120832554 120832943 -129854911 + L1ME4a LINE L1 5584 6045 -76 291 355 9 0 chr2 120833137 120833244 -129854610 + L2 LINE L2 3205 3312 -1 597 136 0 0 chr2 120833903 120834006 -129853848 + (TGGA)n Simple_repeat Simple_repeat 4 106 0 376 296 164 19 chr2 120834015 120834228 -129853626 + MIR SINE MIR 16 259 -3 522 327 107 28 chr2 120834369 120834760 -129853094 + MLT1K LTR MaLR 167 588 0 287 242 10 156 chr2 120834887 120834961 -129852893 - MIR SINE MIR -63 145 102 2365 109 3 0 chr2 120834961 120835264 -129852590 + AluSp SINE Alu 1 304 -9 287 242 10 156 chr2 120835264 120835351 -129852503 - MIR SINE MIR -106 102 4 301 155 17 17 chr2 120835858 120835916 -129851938 - MIR3 SINE MIR -53 155 98 214 333 16 0 chr2 120836459 120836522 -129851332 - MIR SINE MIR -122 86 23 225 0 0 0 chr2 120836594 120836619 -129851235 + (CA)n Simple_repeat Simple_repeat 2 26 0 669 283 119 45 chr2 120836739 120837158 -129850696 + MLT1L LTR MaLR 64 615 0 1076 163 152 57 chr2 120838014 120838278 -129849576 + AluJo SINE Alu 12 300 -12 381 236 109 27 chr2 120838395 120838505 -129849349 + MIR SINE MIR 18 136 -72 1345 234 76 22 chr2 120838624 120839030 -129848824 + MLT1K LTR MaLR 160 587 -1 274 250 164 0 chr2 120839032 120839136 -129848718 + MIR SINE MIR 133 253 -9 210 304 36 0 chr2 120839561 120839617 -129848237 - L3b LINE CR1 -2 1581 1524 743 286 72 97 chr2 120839645 120840001 -129847853 - L3 LINE CR1 -46 1531 1168 1850 166 3 0 chr2 120840001 120840284 -129847570 + AluJb SINE Alu 1 284 -28 300 70 0 0 chr2 120840284 120840327 -129847527 + (CATA)n Simple_repeat Simple_repeat 2 44 0 743 286 72 97 chr2 120840327 120840580 -129847274 - L3 LINE CR1 -407 1170 936 2079 128 24 0 chr2 120840629 120840919 -129846935 + AluSx SINE Alu 1 297 -15 782 277 77 5 chr2 120841052 120841431 -129846423 + L1ME4a LINE L1 5536 5941 -180 28 0 0 0 chr2 120841463 120841491 -129846363 + AT_rich Low_complexity Low_complexity 1 28 0 236 191 0 0 chr2 120841496 120841543 -129846311 - MER116 DNA Mariner -12 68 22 327 290 49 12 chr2 120841599 120841761 -129846093 + L1ME4a LINE L1 5953 6120 -1 215 293 37 0 chr2 120841783 120841865 -129845989 + L3 LINE CR1 854 938 -639 797 257 43 8 chr2 120841873 120842126 -129845728 + MIR SINE MIR 1 262 0 269 254 0 0 chr2 120842276 120842335 -129845519 + L3 LINE CR1 1085 1143 -434 442 195 0 12 chr2 120842495 120842577 -129845277 - MER58A DNA MER1_type -24 83 3 311 323 24 16 chr2 120842899 120843023 -129844831 - L3 LINE CR1 -669 908 784 2240 128 0 0 chr2 120843124 120843421 -129844433 - AluSx SINE Alu -15 297 1 282 304 30 59 chr2 120843643 120843778 -129844076 - L3 LINE CR1 -820 757 627 459 217 184 61 chr2 120844194 120844395 -129843459 + MIR SINE MIR 16 244 -18 365 233 14 0 chr2 120844402 120844475 -129843379 - L2 LINE L2 -12 3301 3228 315 219 98 12 chr2 120844477 120844559 -129843295 + L2 LINE L2 3184 3272 0 1510 171 63 31 chr2 120845060 120845346 -129842508 - AluJb SINE Alu -17 295 1 714 249 105 0 chr2 120845346 120845575 -129842279 - MIR SINE MIR -3 259 7 522 286 29 18 chr2 120846024 120846195 -129841659 - MIR SINE MIR -76 186 14 252 271 104 10 chr2 120847098 120847194 -129840660 - MIR SINE MIR -74 188 84 245 329 218 1 chr2 120847324 120847507 -129840347 + MIR SINE MIR 24 240 -22 277 109 31 0 chr2 120848023 120848087 -129839767 + (TA)n Simple_repeat Simple_repeat 2 67 0 316 247 82 12 chr2 120848088 120848173 -129839681 + L1MC4 LINE L1 6615 6705 -1337 259 255 4 24 chr2 120849689 120849765 -129838089 - MIR SINE MIR -38 170 97 601 200 39 13 chr2 120849781 120849936 -129837918 + MLT1J2 LTR MaLR 53 211 -239 297 0 0 0 chr2 120850053 120850086 -129837768 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 2203 100 0 0 chr2 120850086 120850366 -129837488 - AluSx SINE Alu -32 280 1 266 182 0 18 chr2 120850391 120850446 -129837408 + MLT1J2 LTR MaLR 385 438 -12 282 143 0 0 chr2 120851749 120851798 -129836056 + (GGAA)n Simple_repeat Simple_repeat 2 50 0 493 307 28 17 chr2 120851895 120852071 -129835783 - MER5B DNA MER1_type 0 178 1 1007 108 177 0 chr2 120852076 120852234 -129835620 - MER5A DNA MER1_type -3 186 1 1268 215 53 50 chr2 120852513 120852795 -129835059 + LTR37A LTR ERV1 8 293 -133 2638 124 6 0 chr2 120852795 120853157 -129834697 - THE1B LTR MaLR 0 364 1 1268 215 53 50 chr2 120853157 120853292 -129834562 + LTR37A LTR ERV1 293 426 0 325 283 132 38 chr2 120853977 120854136 -129833718 - MER5A DNA MER1_type -14 175 2 181 224 17 52 chr2 120854341 120854399 -129833455 - L2 LINE L2 -28 3285 3230 295 308 156 55 chr2 120856083 120856499 -129831355 - L2 LINE L2 -6 3266 2809 279 264 198 0 chr2 120857165 120857332 -129830522 + L2 LINE L2 2303 2502 -812 457 291 91 18 chr2 120857423 120857740 -129830114 + LTR16C LTR ERVL 35 422 -69 334 351 89 18 chr2 120857772 120857997 -129829857 + L2 LINE L2 2580 2820 -494 233 271 57 0 chr2 120858043 120858113 -129829741 + L2 LINE L2 3008 3081 -191 2312 86 10 0 chr2 120858195 120858485 -129829369 - AluSq SINE Alu -19 294 2 239 294 77 42 chr2 120858562 120858705 -129829149 + MLT1J LTR MaLR 33 180 -331 1071 190 32 43 chr2 120859211 120859505 -129828349 - L1MB5 LINE L1 -1 6173 5880 27 0 0 0 chr2 120859522 120859549 -129828305 + AT_rich Low_complexity Low_complexity 1 27 0 1834 142 33 4 chr2 120859556 120859831 -129828023 - AluSq SINE Alu -30 283 1 1209 190 8 0 chr2 120859831 120860068 -129827786 - L1MB5 LINE L1 -264 5910 5672 444 239 114 54 chr2 120860203 120860307 -129827547 - MIR SINE MIR 0 262 166 2426 101 3 0 chr2 120860307 120860615 -129827239 - AluSq SINE Alu -4 309 1 444 239 114 54 chr2 120860615 120860694 -129827160 - MIR SINE MIR -96 166 68 998 132 5 68 chr2 120861590 120861780 -129826074 - FRAM SINE Alu 0 176 1 270 164 0 0 chr2 120861787 120861842 -129826012 + (CA)n Simple_repeat Simple_repeat 2 56 0 295 145 0 5 chr2 120861855 120861926 -129825928 - FLAM_A SINE Alu -23 110 1 284 283 103 33 chr2 120862943 120863127 -129824727 + L1ME LINE L1 5533 5729 -392 * 1043 198 92 0 chr2 120863120 120863358 -129824496 + L1MDa LINE L1 3 262 -6278 295 149 69 69 chr2 120863465 120863526 -129824328 + L1MA9 LINE L1 6201 6264 -48 1981 135 3 3 chr2 120863526 120863814 -129824040 - AluJo SINE Alu -18 294 7 295 149 69 69 chr2 120863814 120863839 -129824015 + L1MA9 LINE L1 6263 6287 -25 1284 193 77 75 chr2 120864200 120864589 -129823265 + MLT1B LTR MaLR 1 390 0 2155 87 20 43 chr2 120865336 120865635 -129822219 - AluSp SINE Alu -21 292 1 2381 88 0 19 chr2 120865893 120866238 -129821616 + AluSg SINE Alu 9 347 0 330 269 156 20 chr2 120866238 120866420 -129821434 + MIR SINE MIR 42 248 -14 1644 178 8 0 chr2 120866579 120866843 -129821011 + AluJb SINE Alu 1 266 -46 930 184 55 46 chr2 120867268 120867485 -129820369 + MER20 DNA MER1_type 1 219 0 353 277 115 61 chr2 120867700 120867848 -129820006 - L2 LINE L2 0 3272 3117 2233 110 0 7 chr2 120868374 120868674 -129819180 + AluSp SINE Alu 2 299 -14 453 228 88 22 chr2 120868777 120868913 -129818941 + MIR3 SINE MIR 36 180 -28 441 0 0 0 chr2 120869754 120869803 -129818051 + (TTA)n Simple_repeat Simple_repeat 2 50 0 259 317 75 70 chr2 120870007 120870193 -129817661 + MIR SINE MIR 32 218 -44 216 313 0 3 chr2 120871039 120871120 -129816734 + MIR SINE MIR 76 154 -69 858 101 0 0 chr2 120871526 120871635 -129816219 - AluJb SINE Alu -202 110 2 265 296 93 19 chr2 120871724 120871832 -129816022 - MIR SINE MIR -46 216 101 321 216 84 33 chr2 120873208 120873315 -129814539 - MIR SINE MIR -73 135 26 2522 144 104 36 chr2 120873315 120873870 -129813984 + LTR49 LTR ERV1 1 593 -2 321 216 84 33 chr2 120873870 120873881 -129813973 - MIR SINE MIR -182 26 17 327 207 95 35 chr2 120873999 120874115 -129813739 - LTR33 LTR ERVL -5 516 394 1965 188 44 61 chr2 120874146 120874620 -129813234 + MER31B LTR ERV1 1 466 0 2516 127 31 20 chr2 120874695 120875151 -129812703 + LTR29 LTR ERV1 1 461 -161 1805 135 25 18 chr2 120875149 120875257 -129812597 + LTR56 LTR ERV1 6 112 -333 * 2038 142 0 26 chr2 120875257 120875568 -129812286 - AluSx SINE Alu -9 303 1 1805 135 25 18 chr2 120875568 120875785 -129812069 + LTR56 LTR ERV1 112 333 -112 1367 7 0 0 chr2 120875786 120875935 -129811919 + AluYb8 SINE Alu 166 314 -4 327 200 38 38 chr2 120876645 120876725 -129811129 + MER65-int LTR ERV1 1120 1199 -3672 2311 102 7 7 chr2 120876873 120877176 -129810678 + AluSp SINE Alu 1 303 -10 40 0 0 0 chr2 120877183 120877223 -129810631 + AT_rich Low_complexity Low_complexity 1 40 0 305 158 0 92 chr2 120877312 120877388 -129810466 + tRNA-Glu-GAG tRNA tRNA 7 75 0 258 87 0 22 chr2 120877388 120877434 -129810420 + MER65-int LTR ERV1 1283 1327 -5004 * 648 176 87 49 chr2 120877410 120877572 -129810282 + MER65-int LTR ERV1 935 1100 -4117 285 51 0 0 chr2 120877572 120877611 -129810243 + (CA)n Simple_repeat Simple_repeat 2 40 0 648 176 87 49 chr2 120877611 120877680 -129810174 + MER65-int LTR ERV1 1100 1165 -4052 815 250 34 0 chr2 120877710 120877914 -129809940 + MER65-int LTR ERV1 1838 2048 -4283 7260 199 62 29 chr2 120878133 120878785 -129809069 + L1MC2 LINE L1 569 1198 -5342 267 104 0 0 chr2 120878785 120878833 -129809021 + (CAGG)n Simple_repeat Simple_repeat 2 49 0 7260 199 62 29 chr2 120878833 120880812 -129807042 + L1MC2 LINE L1 1198 3288 -3252 1391 183 83 9 chr2 120880810 120881149 -129806705 + L1MC2 LINE L1 4222 4585 -1955 * 5515 137 8 32 chr2 120881158 120882215 -129805639 + L1MA4 LINE L1 5266 6297 -3 2068 168 16 28 chr2 120882243 120882316 -129805538 + L1MA4 LINE L1 5878 5950 -350 2380 95 0 0 chr2 120882316 120882610 -129805244 + AluY SINE Alu 1 294 -17 2068 168 16 28 chr2 120882610 120882960 -129804894 + L1MA4 LINE L1 5950 6296 -4 1438 235 54 22 chr2 120882960 120883162 -129804692 + L1MC2 LINE L1 4566 4760 -1780 1830 172 14 0 chr2 120883162 120883453 -129804401 + AluJb SINE Alu 1 295 -17 1438 235 54 22 chr2 120883453 120883747 -129804107 + L1MC2 LINE L1 4760 5078 -1462 623 167 0 192 chr2 120883777 120883899 -129803955 + L1MC2 LINE L1 6104 6248 -490 803 171 23 0 chr2 120883899 120884028 -129803826 + FLAM_C SINE Alu 2 133 0 623 167 0 192 chr2 120884028 120884049 -129803805 + L1MC2 LINE L1 6248 6271 -467 2212 110 0 52 chr2 120884049 120884377 -129803477 + AluY SINE Alu 1 311 0 623 167 0 192 chr2 120884377 120884472 -129803382 + L1MC2 LINE L1 6271 6297 -441 951 173 156 46 chr2 120884478 120884715 -129803139 + AluSg SINE Alu 9 271 -39 2138 146 49 37 chr2 120884734 120885166 -129802688 + L1MC2 LINE L1 6295 6731 -7 3065 138 48 15 chr2 120885166 120885507 -129802347 + L1P2 LINE L1 5093 5421 -1128 2085 130 7 0 chr2 120885507 120885791 -129802063 + AluSx SINE Alu 9 294 -18 207 0 0 0 chr2 120885795 120885818 -129802036 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3065 138 48 15 chr2 120885818 120886507 -129801347 + L1P2 LINE L1 5423 6174 -375 1278 71 0 0 chr2 120886507 120886674 -129801180 + L1PA4 LINE L1 5987 6155 0 3238 31 3 0 chr2 120886674 120887054 -129800800 + L1PA4 LINE L1 5770 6152 -3 4413 156 13 56 chr2 120887061 120887659 -129800195 + L1MD1 LINE L1 5354 5901 -341 1600 181 29 7 chr2 120887659 120887964 -129799890 - AluJo SINE Alu 0 311 1 4413 156 13 56 chr2 120887964 120888292 -129799562 + L1MD1 LINE L1 5901 6242 0 514 327 90 34 chr2 120888294 120888560 -129799294 + L1ME4a LINE L1 5734 6014 -107 2104 102 0 14 chr2 120888852 120889135 -129798719 - AluSc SINE Alu 0 309 31 510 290 92 14 chr2 120889165 120889382 -129798472 + MLT1J LTR MaLR 3 236 -275 2096 134 16 10 chr2 120889534 120889877 -129797977 - AluJb SINE Alu 0 345 1 995 138 62 19 chr2 120889885 120890095 -129797759 - L1MA8 LINE L1 -3 6288 6070 1873 161 48 11 chr2 120890828 120891183 -129796671 - L1MB4 LINE L1 0 6180 5813 1546 126 15 26 chr2 120891183 120891443 -129796411 - L1PA5 LINE L1 -2 6152 5887 258 295 60 0 chr2 120891769 120891918 -129795936 - HAL1b LINE L1 -214 1134 977 725 231 92 60 chr2 120891972 120892103 -129795751 - HAL1 LINE L1 -47 2460 2335 2198 84 0 52 chr2 120892103 120892412 -129795442 + AluY SINE Alu 1 293 -18 725 231 92 60 chr2 120892412 120892748 -129795106 - HAL1 LINE L1 -172 2335 1978 1462 273 106 36 chr2 120892867 120893477 -129794377 - HAL1 LINE L1 -712 1795 1229 801 103 0 0 chr2 120893477 120893594 -129794260 + (TTCTCC)n Simple_repeat Simple_repeat 3 119 0 2280 97 0 0 chr2 120893594 120893884 -129793970 - AluSx SINE Alu -22 290 1 1462 273 106 36 chr2 120893884 120894261 -129793593 - HAL1 LINE L1 -1277 1230 738 512 190 82 87 chr2 120894391 120894575 -129793279 - HAL1 LINE L1 -2320 187 5 25 0 0 0 chr2 120894654 120894679 -129793175 + AT_rich Low_complexity Low_complexity 1 25 0 2202 104 3 7 chr2 120895780 120896078 -129791776 + AluSx SINE Alu 1 297 -15 370 328 52 17 chr2 120896260 120896376 -129791478 - L2 LINE L2 -9 3263 3144 1738 172 61 85 chr2 120896551 120896975 -129790879 + MLT2B3 LTR ERVL 5 418 -136 4088 178 18 3 chr2 120897128 120897864 -129789990 + L1MA9 LINE L1 5361 6107 -205 310 114 0 0 chr2 120897864 120897908 -129789946 + Alu SINE Alu 1 44 -259 2245 214 118 110 chr2 120898008 120898552 -129789302 + LTR49-int LTR ERV1 2069 2607 -3724 248 213 0 0 chr2 120898552 120898599 -129789255 - MER54B LTR ERVL 0 793 747 2245 214 118 110 chr2 120898599 120899141 -129788713 + LTR49-int LTR ERV1 2607 3210 -3121 1076 164 0 20 chr2 120899328 120899523 -129788331 + LTR49-int LTR ERV1 1445 1635 -4696 283 143 0 0 chr2 120899529 120899571 -129788283 + LTR49 LTR ERV1 554 595 0 364 174 87 0 chr2 120899572 120899641 -129788213 + LTR49-int LTR ERV1 1 75 -6256 1739 138 34 10 chr2 120899641 120899938 -129787916 - LTR49 LTR ERV1 -26 569 266 313 130 0 58 chr2 120899939 120900008 -129787846 - MER4-int LTR ERV1 -303 6028 5964 300 292 11 0 chr2 120900009 120900098 -129787756 - MER4-int LTR ERV1 -1935 2945 2856 1370 153 38 89 chr2 120900099 120900475 -129787379 - MER4-int LTR ERV1 -174 1612 1358 332 256 23 39 chr2 120900473 120900602 -129787252 - MER4-int LTR ERV1 -5077 1521 1395 * 838 78 0 0 chr2 120900604 120900707 -129787147 - AluSc SINE Alu -206 103 1 1615 141 59 4 chr2 120900708 120900964 -129786890 - MER39B LTR ERV1 -381 272 3 1183 140 0 0 chr2 120900968 120901154 -129786700 + L1MA4A LINE L1 6118 6303 0 915 231 58 19 chr2 120901174 120901434 -129786420 + MER67C LTR ERV1 118 387 -323 828 238 25 5 chr2 120901433 120901635 -129786219 + MER67C LTR ERV1 499 704 -6 * 262 278 0 0 chr2 120901698 120901752 -129786102 - L2 LINE L2 -5 3267 3214 830 228 99 43 chr2 120902100 120902333 -129785521 + MLT1K LTR MaLR 3 248 -340 486 286 71 29 chr2 120902383 120902621 -129785233 + MLT1K LTR MaLR 340 587 -1 27 0 0 0 chr2 120903090 120903117 -129784737 + AT_rich Low_complexity Low_complexity 1 27 0 2105 114 17 7 chr2 120903577 120903875 -129783979 + AluSx SINE Alu 1 301 -11 1188 231 174 37 chr2 120903879 120904155 -129783699 + MLT1G LTR MaLR 34 271 -355 1276 245 121 61 chr2 120904155 120904711 -129783143 + LTR49 LTR ERV1 5 593 -2 1188 231 174 37 chr2 120904711 120904917 -129782937 + MLT1G LTR MaLR 271 626 0 1871 242 76 47 chr2 120904935 120905642 -129782212 + L1MC4a LINE L1 5175 5403 -743 1626 136 42 42 chr2 120905673 120905960 -129781894 + AluJb SINE Alu 1 287 -25 291 329 100 58 chr2 120906232 120906364 -129781490 - L2 LINE L2 -9 3263 3115 1943 166 16 55 chr2 120906364 120906743 -129781111 + MLT1A1 LTR MaLR 2 365 0 291 329 100 58 chr2 120906743 120906850 -129781004 - L2 LINE L2 -157 3115 3014 560 192 17 33 chr2 120906866 120906986 -129780868 - MLT1H1 LTR MaLR -2 553 436 516 160 32 0 chr2 120906988 120907082 -129780772 - MLT1H1 LTR MaLR -447 108 12 1538 167 59 19 chr2 120907205 120907475 -129780379 + AluJo SINE Alu 2 282 -30 189 375 0 0 chr2 120907499 120907563 -129780291 - L2 LINE L2 -527 2787 2724 370 242 125 17 chr2 120907815 120907935 -129779919 - MER5A DNA MER1_type -6 183 51 498 304 88 29 chr2 120908050 120908356 -129779498 - MLT1L LTR MaLR -143 472 149 1771 163 14 7 chr2 120908364 120908658 -129779196 - AluJo SINE Alu -16 296 1 417 237 11 11 chr2 120908912 120909005 -129778849 + AluJo SINE Alu 42 134 -178 2276 87 7 3 chr2 120909217 120909516 -129778338 + AluSq SINE Alu 1 300 -13 1138 201 201 21 chr2 120910132 120910521 -129777333 + L1MC5 LINE L1 7452 7910 -51 358 269 83 113 chr2 120910884 120911281 -129776573 - L1M2 LINE L1 -5708 1141 757 255 61 0 0 chr2 120911468 120911501 -129776353 + (GGGGA)n Simple_repeat Simple_repeat 4 36 0 237 325 90 26 chr2 120913045 120913279 -129774575 + L2 LINE L2 2720 2968 -346 398 260 66 66 chr2 120913333 120913514 -129774340 - MIR SINE MIR -70 192 12 2119 103 3 14 chr2 120913709 120914001 -129773853 + AluSx SINE Alu 1 289 -23 33 0 0 0 chr2 120914012 120914045 -129773809 + AT_rich Low_complexity Low_complexity 1 33 0 552 254 148 19 chr2 120914339 120914385 -129773469 + MIR SINE MIR 14 53 -209 1923 164 7 0 chr2 120914385 120914690 -129773164 - AluJo SINE Alu 0 312 6 552 254 148 19 chr2 120914690 120914860 -129772994 + MIR SINE MIR 53 256 -6 548 327 23 14 chr2 120915847 120916061 -129771793 - MIR SINE MIR -15 247 32 278 219 143 29 chr2 120916084 120916189 -129771665 - MLT1K LTR MaLR -286 302 186 2518 191 29 28 chr2 120917160 120917748 -129770106 - L1MB7 LINE L1 -11 6173 5578 2614 200 48 0 chr2 120917775 120918296 -129769558 - L1MB7 LINE L1 -1066 5080 4535 180 0 0 0 chr2 120918588 120918608 -129769246 + (T)n Simple_repeat Simple_repeat 1 20 0 51 118 0 0 chr2 120918701 120918990 -129768864 + AT_rich Low_complexity Low_complexity 1 289 0 51 118 0 0 chr2 120918963 120919295 -129768559 + AT_rich Low_complexity Low_complexity 1 300 0 817 182 7 39 chr2 120919993 120920147 -129767707 - MER106B DNA MER1_type -910 149 1 344 327 10 0 chr2 120920215 120920316 -129767538 + L2 LINE L2 3210 3311 -2 231 278 166 13 chr2 120922118 120922269 -129765585 + MIR3 SINE MIR 16 189 -19 722 129 0 0 chr2 120922589 120922690 -129765164 - FRAM SINE Alu -75 101 1 2415 89 7 0 chr2 120922977 120923281 -129764573 - AluSq SINE Alu -7 306 1 1770 73 166 15 chr2 120924148 120924407 -129763447 + AluSg1 SINE Alu 1 298 -11 1866 161 3 16 chr2 120924965 120925270 -129762584 + AluJo SINE Alu 1 301 -11 180 0 0 0 chr2 120926475 120926495 -129761359 + (T)n Simple_repeat Simple_repeat 1 20 0 2355 106 0 3 chr2 120927436 120927747 -129760107 + AluSx SINE Alu 1 310 -2 254 331 38 8 chr2 120927880 120928013 -129759841 - MIR SINE MIR -40 222 86 712 237 58 40 chr2 120928703 120928927 -129758927 - MLT1K LTR MaLR -33 555 328 1941 150 29 49 chr2 120929208 120929303 -129758551 + MER2 DNA MER2_type 2 97 -248 1839 154 7 13 chr2 120929303 120929602 -129758252 + AluJo SINE Alu 5 301 -11 1941 150 29 49 chr2 120929602 120929852 -129758002 + MER2 DNA MER2_type 97 340 -5 29 60 0 0 chr2 120930805 120930855 -129756999 + AT_rich Low_complexity Low_complexity 1 50 0 1242 261 68 26 chr2 120931009 120931227 -129756627 - L1ME3A LINE L1 -213 5957 5750 216 0 0 0 chr2 120931227 120931251 -129756603 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1242 261 68 26 chr2 120931251 120931500 -129756354 - L1ME3A LINE L1 -420 5750 5470 428 286 128 40 chr2 120932357 120932630 -129755224 - L2 LINE L2 0 3272 2976 448 223 36 18 chr2 120932673 120932785 -129755069 + MER97b DNA MER1_type? 70 183 -870 301 148 0 0 chr2 120933302 120933356 -129754498 - L1MB4 LINE L1 -2 6178 6125 4769 128 36 12 chr2 120933390 120934145 -129753709 - L1MC1 LINE L1 0 6613 5841 9383 129 89 34 chr2 120934153 120934755 -129753099 - L1MC1 LINE L1 -3947 2479 1912 3935 62 0 2 chr2 120934755 120935226 -129752628 - L1PA10 LINE L1 0 6168 5699 9383 129 89 34 chr2 120935226 120935555 -129752299 - L1MC1 LINE L1 -4514 1912 1603 2052 90 60 0 chr2 120935555 120935846 -129752008 - AluY SINE Alu 0 307 1 9383 129 89 34 chr2 120935846 120936722 -129751132 - L1MC1 LINE L1 -4823 1603 570 375 196 130 0 chr2 120936801 120936893 -129750961 - L1MB7 LINE L1 -10 6174 6071 1718 136 23 7 chr2 120937026 120937328 -129750526 - L1MB7 LINE L1 -344 5834 5528 658 113 0 31 chr2 120937329 120937426 -129750428 + AluJ SINE Alu 55 148 -164 2244 114 3 0 chr2 120937455 120937761 -129750093 - AluSq SINE Alu -6 307 1 1949 149 0 26 chr2 120937770 120938079 -129749775 - AluSx SINE Alu -11 301 1 918 118 16 0 chr2 120939886 120940013 -129747841 + AluJ SINE Alu 152 280 -32 207 186 0 0 chr2 120941012 120941055 -129746799 + (CA)n Simple_repeat Simple_repeat 1 43 0 25 31 0 0 chr2 120941142 120941174 -129746680 + AT_rich Low_complexity Low_complexity 1 32 0 1558 181 15 0 chr2 120941823 120942089 -129745765 + L1MB3 LINE L1 5904 6173 -10 1873 136 3 24 chr2 120942513 120942807 -129745047 - L1PA13 LINE L1 -2 6161 5874 1103 172 166 25 chr2 120943357 120943676 -129744178 - MLT1A2 LTR MaLR -8 366 3 776 231 171 0 chr2 120943855 120944054 -129743800 + MIR SINE MIR 5 237 -25 959 240 152 68 chr2 120944158 120944670 -129743184 - MLT1G1 LTR MaLR 0 555 1 195 42 0 0 chr2 120945616 120945640 -129742214 + (TA)n Simple_repeat Simple_repeat 2 25 0 439 283 47 120 chr2 120947441 120947823 -129740031 + L1MEd LINE L1 664 1017 -5102 238 125 50 0 chr2 120998736 120998776 -129689078 + LTR33 LTR ERVL 480 521 0 919 158 25 0 chr2 120999011 120999169 -129688685 + FRAM SINE Alu 1 162 -4 320 257 106 0 chr2 121000505 121000618 -129687236 - MIR SINE MIR -16 246 122 2249 173 8 18 chr2 121000653 121001047 -129686807 + MLT1B LTR MaLR 1 390 0 386 271 15 8 chr2 121001136 121001269 -129686585 - L1MC5 LINE L1 -104 7857 7724 1216 70 0 13 chr2 121002049 121002207 -129685647 + AluSg/x SINE Alu 122 277 -33 225 0 0 0 chr2 121002207 121002232 -129685622 + (CA)n Simple_repeat Simple_repeat 1 25 0 222 37 0 0 chr2 121002294 121002321 -129685533 + (CA)n Simple_repeat Simple_repeat 1 27 0 183 42 0 0 chr2 121002340 121002364 -129685490 + (CA)n Simple_repeat Simple_repeat 2 25 0 270 0 0 0 chr2 121002382 121002412 -129685442 + (CA)n Simple_repeat Simple_repeat 1 30 0 468 169 0 0 chr2 121002713 121002790 -129685064 + MER58A DNA MER1_type 22 98 -9 277 218 0 0 chr2 121002796 121002851 -129685003 + MIR SINE MIR 34 88 -174 917 238 50 84 chr2 121002999 121003189 -129684665 + L1MC5 LINE L1 7405 7600 -361 2105 121 4 0 chr2 121003189 121003501 -129684353 + AluSx SINE Alu 1 313 0 917 238 50 84 chr2 121003501 121003868 -129683986 + L1MC5 LINE L1 7600 7944 -17 4335 146 37 73 chr2 121003879 121004362 -129683492 + L1MB5 LINE L1 5138 5637 -537 719 164 33 8 chr2 121004362 121004484 -129683370 + FLAM_A SINE Alu 1 125 -8 4335 146 37 73 chr2 121004484 121005080 -129682774 + L1MB5 LINE L1 5637 6174 0 2291 118 0 0 chr2 121006361 121006658 -129681196 - AluSx SINE Alu -14 298 2 370 322 67 21 chr2 121006681 121007012 -129680842 - L2 LINE L2 -203 3110 2764 1122 264 181 32 chr2 121007017 121007824 -129680030 - L2 LINE L2 -1404 1910 984 278 297 91 23 chr2 121007907 121008126 -129679728 - L2 LINE L2 -2341 973 740 2413 183 24 41 chr2 121008126 121008635 -129679219 + MER74B LTR ERVL 56 555 -67 448 298 176 16 chr2 121008696 121009059 -129678795 - L2 LINE L2 -2691 623 203 2000 203 74 34 chr2 121009468 121009528 -129678326 - MLT2B1 LTR ERVL 0 520 464 225 65 0 0 chr2 121009528 121009559 -129678295 + (TG)n Simple_repeat Simple_repeat 1 31 0 2000 203 74 34 chr2 121009559 121009996 -129677858 - MLT2B1 LTR ERVL -56 464 3 1753 136 68 4 chr2 121010132 121010287 -129677567 - AluJb SINE Alu -15 297 153 201 74 0 0 chr2 121010287 121010314 -129677540 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1753 136 68 4 chr2 121010314 121010437 -129677417 - AluJb SINE Alu -159 153 1 437 275 30 65 chr2 121011114 121011314 -129676540 - L1MC4 LINE L1 -1073 6969 6777 262 191 28 135 chr2 121011314 121011455 -129676399 - L1MC4a LINE L1 -1081 6727 6602 2252 126 0 3 chr2 121011457 121011767 -129676087 - AluSg SINE Alu -1 309 1 250 226 311 0 chr2 121012568 121012674 -129675180 - MIR SINE MIR -11 251 113 1864 154 124 16 chr2 121012993 121013486 -129674368 - MER51A LTR ERV1 0 634 1 30 0 0 0 chr2 121013565 121013595 -129674259 + AT_rich Low_complexity Low_complexity 1 30 0 480 197 51 51 chr2 121015197 121015334 -129672520 + L2 LINE L2 3159 3295 -18 195 174 0 22 chr2 121015567 121015613 -129672241 - L2 LINE L2 -109 3204 3160 429 188 0 0 chr2 121016105 121016174 -129671680 + Tigger2 DNA MER2_type 1 69 -2649 * 2503 132 87 2 chr2 121016172 121016575 -129671279 + Tigger2 DNA MER2_type 2280 2716 -2 1913 131 18 0 chr2 121017536 121017831 -129670023 + AluSx SINE Alu 2 301 0 2146 98 0 11 chr2 121019614 121019899 -129667955 + AluSc SINE Alu 24 305 -4 292 152 0 0 chr2 121021267 121021313 -129666541 - AluJb SINE Alu -10 292 247 732 179 4 1 chr2 121021322 121021469 -129666385 + L1ME LINE L1 5662 5811 -359 1180 206 21 0 chr2 121021495 121021733 -129666121 - AluJb SINE Alu -66 246 4 650 253 34 61 chr2 121022269 121022565 -129665289 - L1MC4 LINE L1 -64 7978 7691 28 29 0 0 chr2 121022572 121022607 -129665247 + AT_rich Low_complexity Low_complexity 1 35 0 715 178 8 0 chr2 121022609 121022727 -129665127 - AluSq/x SINE Alu -193 120 2 356 253 0 24 chr2 121022768 121022851 -129665003 - L1MC4 LINE L1 -369 7673 7593 4127 174 25 10 chr2 121022942 121023711 -129664143 - L1MB7 LINE L1 -15 6169 5390 2150 151 17 66 chr2 121024760 121025170 -129662684 - MLT1B LTR MaLR 0 390 1 1071 46 15 0 chr2 121026746 121026877 -129660977 + AluY SINE Alu 169 301 -10 252 298 83 16 chr2 121027525 121027646 -129660208 + MIR SINE MIR 17 145 -63 1709 132 17 24 chr2 121027685 121027973 -129659881 - THE1C LTR MaLR -2 373 88 632 94 24 0 chr2 121028078 121028163 -129659691 - THE1C LTR MaLR -288 87 1 388 125 0 16 chr2 121028163 121028227 -129659627 - THE1C-int LTR MaLR 0 1580 1518 475 83 0 0 chr2 121028242 121028302 -129659552 - THE1C LTR MaLR -315 60 1 11106 99 14 29 chr2 121028302 121029905 -129657949 - THE1C-int LTR MaLR 0 1580 2 2445 116 11 19 chr2 121029906 121030284 -129657570 - THE1C LTR MaLR 0 375 1 1823 125 11 0 chr2 121031323 121031603 -129656251 - L1MB7 LINE L1 -8 6176 5894 790 138 0 0 chr2 121031620 121031743 -129656111 - L1MA6 LINE L1 -4 6296 6174 1036 161 26 0 chr2 121031743 121031936 -129655918 - L1MB7 LINE L1 -277 5907 5710 706 248 35 5 chr2 121032488 121032686 -129655168 + MIR SINE MIR 13 216 -46 538 310 103 40 chr2 121033131 121033820 -129654034 + L2 LINE L2 2505 3311 -2 33061 103 12 57 chr2 121033834 121036482 -129651372 + L1PA7 LINE L1 12 2778 -3376 2277 101 7 0 chr2 121036482 121036778 -129651076 + AluSp SINE Alu 1 298 -15 33061 103 12 57 chr2 121036778 121040571 -129647283 + L1PA7 LINE L1 2778 6154 0 1736 212 145 2 chr2 121041486 121041892 -129645962 - MLT1D LTR MaLR -38 467 4 1675 161 29 14 chr2 121042203 121042483 -129645371 + AluJo SINE Alu 18 301 -11 243 0 0 0 chr2 121043053 121043080 -129644774 + (TA)n Simple_repeat Simple_repeat 2 28 0 360 0 0 0 chr2 121043826 121043866 -129643988 + (TG)n Simple_repeat Simple_repeat 2 41 0 369 241 93 62 chr2 121043966 121044128 -129643726 - MIR SINE MIR -22 240 74 21 0 0 0 chr2 121044576 121044597 -129643257 + AT_rich Low_complexity Low_complexity 1 21 0 277 155 52 0 chr2 121044597 121044655 -129643199 + HsTC2 DNA Tc2 1 61 -1837 572 282 107 36 chr2 121044780 121045117 -129642737 - LTR16A LTR ERVL -31 419 59 5115 242 53 19 chr2 121046667 121046922 -129640932 + L1M4 LINE L1 2877 3122 -3024 2155 116 3 7 chr2 121046922 121047214 -129640640 + AluSx SINE Alu 1 291 -21 5115 242 53 19 chr2 121047214 121048555 -129639299 + L1M4 LINE L1 3122 4528 -1618 1993 204 39 28 chr2 121048532 121049066 -129638788 + L1M4 LINE L1 4785 5324 -822 * 1962 153 27 22 chr2 121049035 121049491 -129638363 + L1MB1 LINE L1 5174 5631 -537 * 1017 158 0 0 chr2 121049492 121049672 -129638182 + FRAM SINE Alu 1 180 0 2884 169 24 11 chr2 121049673 121049723 -129638131 + L1MB1 LINE L1 5619 5667 -501 1785 187 27 0 chr2 121049723 121050022 -129637832 + AluJo SINE Alu 1 307 -5 2884 169 24 11 chr2 121050022 121050510 -129637344 + L1MB1 LINE L1 5667 6164 -4 1392 184 201 19 chr2 121050526 121050900 -129636954 + L1ME1 LINE L1 5272 5713 -631 552 248 43 96 chr2 121050925 121051228 -129636626 + L1ME1 LINE L1 5873 6159 -7 495 278 38 42 chr2 121052060 121052323 -129635531 + HAL1 LINE L1 2246 2507 0 326 83 0 0 chr2 121055707 121055755 -129632099 + Alu SINE Alu 258 305 -3 304 272 61 26 chr2 121056379 121056493 -129631361 + MIR3 SINE MIR 85 202 -6 1945 128 53 113 chr2 121057855 121058065 -129629789 - MLT1A1 LTR MaLR 0 365 144 1816 176 7 7 chr2 121058065 121058372 -129629482 - AluJo SINE Alu -5 307 1 1945 128 53 113 chr2 121058372 121058504 -129629350 - MLT1A1 LTR MaLR -221 144 57 854 127 0 0 chr2 121058504 121058622 -129629232 - FLAM_C SINE Alu -15 118 1 1945 128 53 113 chr2 121058622 121058676 -129629178 - MLT1A1 LTR MaLR -308 57 1 2292 87 3 3 chr2 121059088 121059375 -129628479 - AluSx SINE Alu -25 287 1 2011 139 3 10 chr2 121059413 121059715 -129628139 + AluSq SINE Alu 13 312 -1 1190 239 79 83 chr2 121060058 121061090 -129626764 - L1MC4 LINE L1 -1188 6620 5814 2817 102 26 9 chr2 121061761 121062182 -129625672 - MSTA LTR MaLR 0 428 1 195 42 0 0 chr2 121063486 121063510 -129624344 + (CCA)n Simple_repeat Simple_repeat 3 26 0 536 268 19 0 chr2 121063523 121063680 -129624174 + MIR SINE MIR 88 247 -15 432 215 0 0 chr2 121064725 121064804 -129623050 + Tigger5 DNA MER2_type 1 79 -2244 443 197 0 0 chr2 121064806 121064882 -129622972 - Tigger5 DNA MER2_type -6 2317 2242 * 506 175 0 0 chr2 121064872 121064952 -129622902 + Tigger5 DNA MER2_type 2242 2321 -2 1524 260 82 2 chr2 121065004 121065404 -129622450 - MER70B LTR ERVL -143 435 4 316 178 55 0 chr2 121066036 121066109 -129621745 + MIR SINE MIR 116 192 -70 339 229 195 0 chr2 121066136 121066254 -129621600 - MIR SINE MIR -1 261 121 234 196 22 0 chr2 121066278 121066324 -129621530 + L2 LINE L2 3210 3256 -16 403 181 32 58 chr2 121066510 121066642 -129621212 + MLT1J LTR MaLR 1 177 -308 841 198 108 52 chr2 121066781 121066993 -129620861 + MER58A DNA MER1_type 1 224 0 942 219 5 5 chr2 121067041 121067256 -129620598 - L1M4 LINE L1 -3257 2889 2675 401 276 80 49 chr2 121067893 121068118 -129619736 + MIR SINE MIR 21 252 -10 234 164 36 0 chr2 121068195 121068250 -129619604 + L1M LINE L1 5373 5429 -2379 32 57 0 0 chr2 121068361 121068414 -129619440 + AT_rich Low_complexity Low_complexity 1 53 0 209 151 19 0 chr2 121068469 121068522 -129619332 + (TA)n Simple_repeat Simple_repeat 2 55 0 22 35 0 0 chr2 121068560 121068589 -129619265 + AT_rich Low_complexity Low_complexity 1 29 0 2287 103 3 0 chr2 121068632 121068932 -129618922 + AluSq SINE Alu 3 303 -10 494 289 117 37 chr2 121069061 121069470 -129618384 - L1ME LINE L1 -332 5789 5348 249 108 0 0 chr2 121069785 121069822 -129618032 + (TTAA)n Simple_repeat Simple_repeat 4 40 0 25 31 0 0 chr2 121072145 121072177 -129615677 + AT_rich Low_complexity Low_complexity 1 32 0 344 242 217 12 chr2 121072816 121072977 -129614877 + MIR SINE MIR 51 244 -18 5533 195 116 74 chr2 121073037 121074146 -129613708 - L1MC4a LINE L1 0 7808 6747 258 32 0 0 chr2 121074146 121074177 -129613677 + (CA)n Simple_repeat Simple_repeat 2 32 0 5533 195 116 74 chr2 121074177 121074230 -129613624 - L1MC4a LINE L1 -1061 6747 6698 2096 140 0 31 chr2 121074230 121074552 -129613302 + AluJb SINE Alu 1 312 0 5533 195 116 74 chr2 121074552 121075139 -129612715 - L1MC4a LINE L1 -1110 6698 5984 219 276 0 35 chr2 121075201 121075288 -129612566 + L2 LINE L2 2873 2956 -316 2311 105 0 0 chr2 121076202 121076498 -129611356 - AluSx SINE Alu -16 296 1 212 267 57 19 chr2 121076560 121076665 -129611189 - MIR SINE MIR -63 199 91 565 204 0 0 chr2 121076722 121076825 -129611029 + AluJb SINE Alu 135 237 -75 351 247 0 0 chr2 121077076 121077153 -129610701 + L2 LINE L2 3186 3262 -10 1838 149 29 0 chr2 121077153 121077429 -129610425 + AluJb SINE Alu 1 284 -28 1890 163 0 10 chr2 121077442 121077731 -129610123 + AluJb SINE Alu 1 286 -26 287 233 139 39 chr2 121077976 121078105 -129609749 + MIR SINE MIR 121 262 0 1711 163 10 21 chr2 121078292 121078580 -129609274 + AluJo SINE Alu 1 285 -27 333 0 0 0 chr2 121078580 121078617 -129609237 + (CA)n Simple_repeat Simple_repeat 2 38 0 324 102 0 0 chr2 121079647 121079696 -129608158 + (CA)n Simple_repeat Simple_repeat 2 50 0 19573 110 11 6 chr2 121079972 121081626 -129606228 + L1PA8A LINE L1 2420 4063 -2068 2293 119 3 3 chr2 121081626 121081938 -129605916 + AluSp SINE Alu 1 312 -1 19573 110 11 6 chr2 121081938 121083977 -129603877 + L1PA8A LINE L1 4063 6131 0 273 29 0 0 chr2 121085191 121085225 -129602629 + (CA)n Simple_repeat Simple_repeat 1 34 0 636 273 42 13 chr2 121085507 121085745 -129602109 - MIR SINE MIR -17 245 1 390 291 82 9 chr2 121086024 121086244 -129601610 + MIR SINE MIR 21 256 -6 231 204 0 0 chr2 121086539 121086588 -129601266 + T-rich Low_complexity Low_complexity 1 49 0 1267 170 13 13 chr2 121086597 121086826 -129601028 - AluJb SINE Alu -83 229 1 1754 225 115 50 chr2 121086912 121087299 -129600555 + MLT1E LTR MaLR 1 436 -157 2089 120 67 22 chr2 121087299 121087658 -129600196 - THE1C LTR MaLR 0 375 1 1754 225 115 50 chr2 121087658 121087826 -129600028 + MLT1E LTR MaLR 436 592 -1 330 302 97 26 chr2 121087830 121088141 -129599713 + L1ME4a LINE L1 5545 5877 -244 1705 180 64 3 chr2 121088302 121088630 -129599224 - MER7A DNA MER2_type 0 346 1 1294 234 134 5 chr2 121088764 121089174 -129598680 + LTR16B LTR ERVL 1 463 -1 258 287 6 98 chr2 121089230 121089394 -129598460 - L2 LINE L2 -98 3174 3026 694 225 201 5 chr2 121089439 121089648 -129598206 - MIR SINE MIR 0 262 13 363 158 50 16 chr2 121089727 121089823 -129598031 - LTR50 LTR ERVL -5 787 676 2722 90 80 8 chr2 121090017 121090416 -129597438 + MSTA LTR MaLR 1 428 0 643 198 115 16 chr2 121091128 121091320 -129596534 + MIR SINE MIR 28 238 -24 2466 88 10 0 chr2 121092648 121092955 -129594899 + AluSx SINE Alu 1 310 -2 418 118 54 35 chr2 121093752 121094069 -129593785 + (CA)n Simple_repeat Simple_repeat 1 323 0 203 105 79 13 chr2 121094121 121094197 -129593657 + (CA)n Simple_repeat Simple_repeat 1 81 0 320 99 37 12 chr2 121094237 121094318 -129593536 + (CA)n Simple_repeat Simple_repeat 1 83 0 337 183 115 48 chr2 121094542 121094646 -129593208 + MLT1I LTR MaLR 72 182 -227 367 236 107 0 chr2 121094684 121094824 -129593030 + MLT1I LTR MaLR 253 407 -2 220 226 0 0 chr2 121095570 121095623 -129592231 - L2 LINE L2 -15 3257 3205 904 239 153 24 chr2 121096384 121096835 -129591019 - L2 LINE L2 -1 3312 2804 1758 156 50 0 chr2 121097228 121097510 -129590344 + AluSx SINE Alu 1 296 -16 276 217 0 50 chr2 121097516 121097576 -129590278 + L2 LINE L2 2910 2966 -306 2761 147 108 16 chr2 121097718 121098404 -129589450 - LTR48 LTR ERV1 -14 773 1 2302 105 0 0 chr2 121098664 121098960 -129588894 + AluSx SINE Alu 1 296 -16 1891 132 32 40 chr2 121099056 121099341 -129588513 - THE1C LTR MaLR 0 375 92 1636 133 174 7 chr2 121099341 121099635 -129588219 - MER61A LTR ERV1 0 343 1 1891 132 32 40 chr2 121099635 121099727 -129588127 - THE1C LTR MaLR -283 92 1 404 269 119 52 chr2 121100417 121100610 -129587244 - MIR SINE MIR -37 225 20 3045 155 60 77 chr2 121101559 121102262 -129585592 - LTR8 LTR ERV1 0 691 1 365 302 95 11 chr2 121103345 121103534 -129584320 + L1ME4a LINE L1 5667 5871 -250 448 282 79 10 chr2 121103534 121103730 -129584124 + LTR33 LTR ERVL 6 190 -333 613 222 83 17 chr2 121103768 121103948 -129583906 + LTR33 LTR ERVL 330 521 0 2059 95 66 0 chr2 121104261 121104535 -129583319 + AluSc SINE Alu 1 292 -17 184 263 113 75 chr2 121104670 121104750 -129583104 + MIR3 SINE MIR 13 95 -113 * 307 288 34 17 chr2 121104732 121104850 -129583004 + MIR SINE MIR 107 226 -36 1659 189 67 120 chr2 121105128 121105562 -129582292 - MLT1E LTR MaLR -11 582 189 324 0 0 0 chr2 121105562 121105598 -129582256 + (TG)n Simple_repeat Simple_repeat 2 37 0 1659 189 67 120 chr2 121105598 121105778 -129582076 - MLT1E LTR MaLR -404 189 1 315 19 58 0 chr2 121105927 121105979 -129581875 + (TA)n Simple_repeat Simple_repeat 2 56 0 2207 93 3 7 chr2 121105979 121106268 -129581586 - AluSx SINE Alu -24 288 1 610 272 84 47 chr2 121106581 121106829 -129581025 - MLT1J LTR MaLR -24 487 213 1855 100 85 4 chr2 121106829 121107131 -129580723 - AluSg SINE Alu 0 323 1 610 272 84 47 chr2 121107131 121107337 -129580517 - MLT1J LTR MaLR -298 213 16 205 350 136 0 chr2 121107367 121107470 -129580384 - L3 LINE CR1 -1441 136 20 607 278 126 30 chr2 121107690 121108165 -129579689 + LTR33A LTR ERVL 3 523 0 708 211 78 94 chr2 121108170 121108553 -129579301 - L1MC5 LINE L1 -83 7878 7502 411 56 0 0 chr2 121108578 121108632 -129579222 + (CA)n Simple_repeat Simple_repeat 1 54 0 380 300 2 2 chr2 121108957 121109063 -129578791 - MIR SINE MIR -63 145 56 921 146 0 0 chr2 121109336 121109466 -129578388 + FLAM_C SINE Alu 1 130 -13 2195 88 3 18 chr2 121109482 121109794 -129578060 + AluY SINE Alu 1 308 0 1339 150 22 0 chr2 121109882 121110109 -129577745 + L1MB5 LINE L1 5943 6174 0 2395 73 3 7 chr2 121110550 121110852 -129577002 - AluY SINE Alu -10 301 1 320 260 244 0 chr2 121111286 121111413 -129576441 + MIR SINE MIR 91 248 -14 1889 162 21 44 chr2 121112266 121112649 -129575205 + MLT1B LTR MaLR 1 374 -16 465 136 0 49 chr2 121112653 121112734 -129575120 + MER97a DNA MER1_type? 103 179 -715 2361 90 7 0 chr2 121113011 121113310 -129574544 - AluSp SINE Alu -12 301 1 1598 201 20 0 chr2 121113500 121113793 -129574061 + AluJo SINE Alu 1 299 -13 230 333 83 11 chr2 121113893 121114073 -129573781 - L2 LINE L2 -378 2936 2744 1784 176 7 17 chr2 121115043 121115345 -129572509 + AluJo SINE Alu 1 299 -13 225 303 72 72 chr2 121115426 121115677 -129572177 + L2 LINE L2 2970 3220 -52 250 309 149 15 chr2 121115953 121116154 -129571700 - L2 LINE L2 -54 3259 3032 459 99 0 28 chr2 121117103 121117174 -129570680 - MER45 DNA AcHobo 0 1581 1513 820 141 0 0 chr2 121117178 121117299 -129570555 + AluSg/x SINE Alu 190 310 -2 320 209 0 0 chr2 121117331 121117398 -129570456 - MER45 DNA AcHobo -886 67 1 2426 83 0 35 chr2 121117547 121117861 -129569993 - AluSx SINE Alu -9 303 1 568 212 185 0 chr2 121118854 121119005 -129568849 - MER5A DNA MER1_type -2 187 9 538 227 87 58 chr2 121119010 121119217 -129568637 - L1ME3A LINE L1 -23 6147 5935 245 118 0 0 chr2 121119217 121119251 -129568603 - U2 snRNA snRNA -153 35 2 654 268 144 20 chr2 121119363 121119669 -129568185 + MLT1L LTR MaLR 117 460 -155 * 1133 151 50 91 chr2 121119652 121119750 -129568104 - MER96B DNA MER1_type? -7 410 309 1725 181 0 10 chr2 121119750 121120038 -129567816 - AluJo SINE Alu -27 285 1 1133 151 50 91 chr2 121120038 121120221 -129567633 - MER96B DNA MER1_type? -108 309 147 2395 76 17 0 chr2 121120221 121120512 -129567342 - AluSp SINE Alu -17 296 1 1133 151 50 91 chr2 121120512 121120613 -129567241 - MER96B DNA MER1_type? -270 147 43 427 219 48 0 chr2 121120645 121120750 -129567104 + MLT1L LTR MaLR 493 602 -13 237 217 50 0 chr2 121120775 121120835 -129567019 - MLT1K LTR MaLR -24 564 502 1465 267 82 60 chr2 121120934 121121652 -129566202 + MER21B LTR ERV1 6 739 -124 1553 196 16 19 chr2 121122038 121122349 -129565505 + AluJo SINE Alu 1 310 -2 290 248 152 116 chr2 121122428 121122626 -129565228 + MIR SINE MIR 46 250 -12 259 310 0 0 chr2 121122718 121122776 -129565078 + L2 LINE L2 3254 3311 -2 659 286 24 0 chr2 121123712 121123895 -129563959 - MIR3 SINE MIR -11 197 8 332 298 184 0 chr2 121124465 121124606 -129563248 + MIR SINE MIR 65 231 -31 588 225 0 0 chr2 121125405 121125516 -129562338 + MER81 DNA DNA 1 111 -3 531 247 111 21 chr2 121125857 121126047 -129561807 + MIR SINE MIR 46 252 -10 1231 239 66 11 chr2 121126172 121126536 -129561318 + L1ME4a LINE L1 5485 5868 -253 404 231 58 102 chr2 121126617 121126810 -129561044 - L1ME3A LINE L1 -199 5922 5753 2246 91 27 7 chr2 121126810 121127107 -129560747 + AluSx SINE Alu 1 303 -9 404 231 58 102 chr2 121127107 121127307 -129560547 - L1ME3A LINE L1 -368 5753 5546 1016 278 37 41 chr2 121127433 121127922 -129559932 + MER69 DNA AcHobo 855 1341 -1185 651 159 138 20 chr2 121127899 121128094 -129559760 + MER69 DNA AcHobo 1679 1896 -630 * 932 219 65 8 chr2 121128181 121128441 -129559413 + MER69 DNA AcHobo 2249 2523 -3 1822 130 13 62 chr2 121128666 121128973 -129558881 + AluJo SINE Alu 1 292 -20 195 175 0 50 chr2 121128979 121129019 -129558835 - L2 LINE L2 -14 3299 3262 708 157 60 38 chr2 121129558 121129743 -129558111 - MER53 DNA DNA 0 189 1 338 194 15 0 chr2 121130521 121130588 -129557266 - MER5A DNA MER1_type -80 109 42 1557 226 118 55 chr2 121131179 121131369 -129556485 + MLT1E2 LTR MaLR 2 179 -447 2034 106 24 3 chr2 121131369 121131662 -129556192 + AluSx SINE Alu 1 299 -13 1557 226 118 55 chr2 121131662 121132056 -129555798 + MLT1E2 LTR MaLR 179 623 -3 338 272 0 12 chr2 121132476 121132557 -129555297 - MIR3 SINE MIR -3 205 126 261 263 29 117 chr2 121134637 121134774 -129553080 + MIR SINE MIR 79 203 -59 493 241 7 7 chr2 121135336 121135473 -129552381 - L1ME3A LINE L1 -1088 5058 4922 241 281 37 12 chr2 121135778 121135860 -129551994 + LTR67 LTR ERVL 457 540 -17 231 256 12 61 chr2 121136258 121136340 -129551514 - MIR3 SINE MIR -1 207 130 281 336 19 0 chr2 121136340 121136447 -129551407 - MIR3 SINE MIR -43 165 57 307 327 43 37 chr2 121137276 121137438 -129550416 + HAL1 LINE L1 2306 2468 -39 350 273 34 23 chr2 121137536 121137624 -129550230 + MER5B DNA MER1_type 90 178 0 2361 56 3 7 chr2 121138462 121138750 -129549104 + AluY SINE Alu 1 287 -24 242 245 57 0 chr2 121139117 121139170 -129548684 - MIR SINE MIR -88 174 119 267 254 48 0 chr2 121139265 121139328 -129548526 - MIR SINE MIR -88 174 109 * 558 228 88 47 chr2 121139320 121139535 -129548319 + MIR SINE MIR 39 262 0 2384 94 3 7 chr2 121140268 121140567 -129547287 + AluSx SINE Alu 1 298 -14 503 258 47 0 chr2 121140601 121140729 -129547125 - MIR SINE MIR -43 219 86 355 327 26 6 chr2 121141004 121141160 -129546694 - MLT1L LTR MaLR -347 268 110 1717 173 0 26 chr2 121141397 121141709 -129546145 - AluJb SINE Alu -8 304 1 570 332 147 45 chr2 121141749 121142311 -129545543 + L2 LINE L2 1716 2219 -1095 1307 207 69 0 chr2 121142311 121142586 -129545268 - AluJo SINE Alu -18 294 1 570 332 147 45 chr2 121142586 121142964 -129544890 + L2 LINE L2 2219 2752 -562 349 239 142 0 chr2 121143250 121143363 -129544491 + MIR SINE MIR 122 250 -12 821 302 36 12 chr2 121143363 121143597 -129544257 - MIR SINE MIR -1 261 19 2249 122 0 0 chr2 121143597 121143901 -129543953 - AluSx SINE Alu -8 304 1 821 302 36 12 chr2 121143901 121143914 -129543940 - MIR SINE MIR -243 19 8 352 290 40 0 chr2 121144625 121144725 -129543129 + L2 LINE L2 3144 3247 -25 276 266 260 19 chr2 121145517 121145671 -129542183 - MIR SINE MIR 0 262 72 259 289 0 0 chr2 121145769 121145852 -129542002 + MIR SINE MIR 171 253 -9 1130 256 41 57 chr2 121146539 121147027 -129540827 + MLT1J LTR MaLR 1 480 -31 239 170 0 19 chr2 121147656 121147709 -129540145 + GA-rich Low_complexity Low_complexity 3 54 0 265 273 8 47 chr2 121147826 121147897 -129539957 + (CATATA)n Simple_repeat Simple_repeat 6 71 -57 2012 188 142 25 chr2 121147897 121148382 -129539472 + MLT1F LTR MaLR 1 542 0 265 273 8 47 chr2 121148382 121148438 -129539416 + (CATATA)n Simple_repeat Simple_repeat 71 128 0 443 267 81 16 chr2 121148477 121148606 -129539248 - MIR SINE MIR -89 173 37 358 250 154 42 chr2 121148636 121148680 -129539174 - L1ME4a LINE L1 -120 6001 5963 1812 154 58 9 chr2 121148680 121149010 -129538844 - L1MC2 LINE L1 -1 6343 5998 358 250 154 42 chr2 121149010 121149205 -129538649 - L1ME4a LINE L1 -158 5963 5735 270 56 0 0 chr2 121149984 121150020 -129537834 + (TC)n Simple_repeat Simple_repeat 2 37 0 2364 75 3 3 chr2 121150054 121150349 -129537505 + AluY SINE Alu 1 295 -16 187 368 79 14 chr2 121151515 121151792 -129536062 - L2 LINE L2 -63 3209 2915 866 174 231 11 chr2 121152564 121152828 -129535026 + MER5C DNA MER1_type 1 322 -2 358 238 5 150 chr2 121152894 121153087 -129534767 - MER5B DNA MER1_type -9 169 5 246 333 41 32 chr2 121153670 121153793 -129534061 - L2 LINE L2 0 3272 3149 812 247 12 27 chr2 121153856 121154115 -129533739 + MER112 DNA MER1_type 1 255 -1 201 208 21 0 chr2 121154141 121154189 -129533665 + L2 LINE L2 3264 3312 -1 1999 167 100 12 chr2 121154557 121154987 -129532867 + MLT1D LTR MaLR 10 477 -28 1999 102 9 74 chr2 121155003 121155328 -129532526 - AluSx SINE Alu -8 304 1 240 111 0 0 chr2 121155328 121155364 -129532490 + MLT1D LTR MaLR 462 497 -8 285 75 0 0 chr2 121155470 121155510 -129532344 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr2 121155545 121155566 -129532288 + AT_rich Low_complexity Low_complexity 1 21 0 683 262 29 0 chr2 121155791 121155997 -129531857 + L1MB5 LINE L1 5570 5781 -340 854 130 0 36 chr2 121157885 121158023 -129529831 + FLAM_C SINE Alu 1 133 0 312 242 232 0 chr2 121158026 121158125 -129529729 + MER5A DNA MER1_type 61 182 -7 661 184 9 0 chr2 121158403 121158517 -129529337 + FLAM_A SINE Alu 11 125 -17 229 86 0 0 chr2 121158519 121158554 -129529300 + L1MB5 LINE L1 5902 5936 -238 227 341 47 47 chr2 121158555 121158769 -129529085 - L2 LINE L2 -230 3042 2829 318 153 0 0 chr2 121159752 121159811 -129528043 + GA-rich Low_complexity Low_complexity 1 59 0 219 36 0 0 chr2 121160462 121160490 -129527364 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr2 121160665 121160686 -129527168 + (T)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr2 121160802 121160823 -129527031 + (A)n Simple_repeat Simple_repeat 1 21 0 347 286 105 35 chr2 121163334 121163505 -129524349 - MIR SINE MIR -10 252 70 262 105 0 0 chr2 121163536 121163574 -129524280 + MER3 DNA MER1_type 6 43 -166 791 204 34 0 chr2 121163611 121163787 -129524067 + MER3 DNA MER1_type 28 209 0 244 188 0 0 chr2 121163745 121163793 -129524061 - MER3 DNA MER1_type -120 89 42 * 430 263 50 50 chr2 121163803 121163963 -129523891 + MIR3 SINE MIR 40 199 -9 181 345 48 0 chr2 121165048 121165132 -129522722 + MIR SINE MIR 175 262 0 337 293 79 40 chr2 121165523 121165780 -129522074 - L2 LINE L2 -40 3232 2890 207 204 0 0 chr2 121165833 121165882 -129521972 + (TG)n Simple_repeat Simple_repeat 2 50 0 549 99 0 0 chr2 121166360 121166441 -129521413 + (TG)n Simple_repeat Simple_repeat 1 81 0 251 267 82 97 chr2 121166533 121166728 -129521126 - L2 LINE L2 -568 2746 2555 185 275 0 0 chr2 121166859 121166899 -129520955 - L2 LINE L2 -20 3252 3213 226 214 0 43 chr2 121166928 121166998 -129520856 - L1MC4 LINE L1 -5 8037 7971 3252 230 98 35 chr2 121167271 121168593 -129519261 - L1MC4 LINE L1 -122 7686 6442 187 297 183 41 chr2 121168961 121169251 -129518603 - L2 LINE L2 -1093 2221 1891 184 344 31 47 chr2 121169259 121169387 -129518467 + MER5A DNA MER1_type 4 129 -60 342 221 0 0 chr2 121170031 121170099 -129517755 - L2 LINE L2 -19 3253 3186 268 255 172 43 chr2 121170330 121170655 -129517199 - L1MC4a LINE L1 -1666 6142 5776 1150 68 0 0 chr2 121170809 121170955 -129516899 - AluSg/x SINE Alu -11 299 154 406 245 51 58 chr2 121170998 121171273 -129516581 + MLT1G LTR MaLR 215 489 -66 21 0 0 0 chr2 121171286 121171307 -129516547 + AT_rich Low_complexity Low_complexity 1 21 0 233 323 171 19 chr2 121171755 121171913 -129515941 + L2 LINE L2 2593 2774 -540 530 264 85 65 chr2 121172306 121172464 -129515390 + MER46C DNA MER2_type 8 161 -177 2212 118 0 3 chr2 121172464 121172769 -129515085 - AluSx SINE Alu -8 304 1 530 264 85 65 chr2 121172769 121172917 -129514937 + MER46C DNA MER2_type 161 320 -18 309 265 170 14 chr2 121172976 121173123 -129514731 - L1MC4a LINE L1 -713 5451 5282 15582 120 30 56 chr2 121173213 121173386 -129514468 + Tigger2 DNA MER2_type 1 177 -2541 2417 93 0 6 chr2 121173386 121173697 -129514157 + AluSg SINE Alu 1 309 -1 15582 120 30 56 chr2 121173697 121174674 -129513180 + Tigger2 DNA MER2_type 177 1177 -1541 2026 104 42 0 chr2 121174674 121174963 -129512891 + AluSg SINE Alu 1 301 -9 15582 120 30 56 chr2 121174963 121176116 -129511738 + Tigger2 DNA MER2_type 1177 2224 -494 2292 77 3 0 chr2 121176116 121176403 -129511451 - AluY SINE Alu -23 288 1 15582 120 30 56 chr2 121176403 121176886 -129510968 + Tigger2 DNA MER2_type 2224 2718 0 1091 259 97 49 chr2 121176903 121177468 -129510386 + L2 LINE L2 2714 3304 -9 1549 201 10 14 chr2 121177593 121177881 -129509973 - AluJo SINE Alu -21 291 5 318 293 71 10 chr2 121178325 121178424 -129509430 + L2 LINE L2 3143 3247 -25 2513 67 0 0 chr2 121179265 121179564 -129508290 + AluY SINE Alu 1 299 -12 1768 182 3 3 chr2 121179673 121179975 -129507879 - AluJb SINE Alu -10 302 1 2694 254 101 34 chr2 121180009 121181244 -129506610 - L1MC4 LINE L1 0 8042 6725 372 249 75 50 chr2 121181303 121181504 -129506350 - L1MC4a LINE L1 -1273 6535 6330 1323 214 74 3 chr2 121181511 121181820 -129506034 + MER58B DNA MER1_type 5 335 -6 438 233 203 12 chr2 121182001 121182064 -129505790 - MER3 DNA MER1_type -3 206 156 2342 92 0 7 chr2 121182064 121182369 -129505485 + AluSx SINE Alu 1 303 -9 438 233 203 12 chr2 121182369 121182468 -129505386 - MER3 DNA MER1_type -53 156 13 349 263 25 0 chr2 121182468 121182548 -129505306 - MIR SINE MIR -65 143 62 1399 166 90 32 chr2 121182644 121182921 -129504933 - AluJb SINE Alu -19 293 1 264 345 24 12 chr2 121183551 121183635 -129504219 + MIR SINE MIR 31 115 -147 1221 258 112 13 chr2 121183691 121184145 -129503709 - MLT1G LTR MaLR 0 590 92 1184 158 0 94 chr2 121184232 121184314 -129503540 - AluJo SINE Alu -100 212 124 2513 56 0 7 chr2 121184314 121184617 -129503237 - AluY SINE Alu -10 301 1 1184 158 0 94 chr2 121184617 121184768 -129503086 - AluJo SINE Alu -188 124 1 974 217 33 5 chr2 121184947 121185159 -129502695 - MER20 DNA MER1_type -1 218 1 425 242 193 31 chr2 121185169 121185330 -129502524 + MER5A DNA MER1_type 3 189 0 21 0 0 0 chr2 121185444 121185465 -129502389 + AT_rich Low_complexity Low_complexity 1 21 0 319 274 26 43 chr2 121185551 121185668 -129502186 - L1MC4 LINE L1 -2 8040 7926 459 211 181 44 chr2 121186036 121186263 -129501591 + MER5C DNA MER1_type 1 258 -66 831 268 105 13 chr2 121186263 121186772 -129501082 - MLT1G1 LTR MaLR 0 595 1 244 191 127 32 chr2 121186772 121186835 -129501019 + MER5C DNA MER1_type 254 322 -2 213 283 0 0 chr2 121186993 121187046 -129500808 + (TG)n Simple_repeat Simple_repeat 1 53 0 328 286 56 24 chr2 121187072 121187198 -129500656 - HAL1 LINE L1 -1800 707 578 233 348 0 14 chr2 121187502 121187571 -129500283 + L2 LINE L2 3205 3272 0 402 106 212 0 chr2 121188180 121188293 -129499561 - MER69 DNA AcHobo -102 2424 2288 4137 159 53 30 chr2 121188350 121189480 -129498374 - L1MB3 LINE L1 -2 6417 5264 1868 227 81 47 chr2 121189495 121189655 -129498199 - L1MB3 LINE L1 -3166 3216 3063 2114 125 13 16 chr2 121189655 121189958 -129497896 - AluSx SINE Alu -10 302 1 1868 227 81 47 chr2 121189958 121191019 -129496835 - L1MB3 LINE L1 -3319 3063 1943 2201 99 0 17 chr2 121191059 121191352 -129496502 - AluSc SINE Alu -11 298 11 1620 270 32 8 chr2 121191388 121191904 -129495950 - L1MB3 LINE L1 -4660 1724 1189 216 0 0 0 chr2 121191904 121191928 -129495926 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1620 270 32 8 chr2 121191928 121192029 -129495825 - L1MB3 LINE L1 -5195 1189 1092 338 222 91 20 chr2 121192261 121192360 -129495494 - MIR SINE MIR -81 181 76 5448 153 23 47 chr2 121192605 121193702 -129494152 - MER11C LTR ERVK 0 1071 1 1780 150 47 13 chr2 121193777 121194077 -129493777 - AluJo SINE Alu -2 310 1 6997 174 61 44 chr2 121194158 121195731 -129492123 - MER52A LTR ERV1 0 1755 202 2362 206 70 33 chr2 121196175 121196790 -129491064 - L1ME1 LINE L1 -67 6099 5439 333 0 0 0 chr2 121196790 121196827 -129491027 + (TG)n Simple_repeat Simple_repeat 2 38 0 2362 206 70 33 chr2 121196827 121197139 -129490715 - L1ME1 LINE L1 -727 5439 5140 611 221 40 18 chr2 121197150 121197372 -129490482 - L1ME1 LINE L1 -1241 4905 4679 465 220 17 34 chr2 121197369 121197487 -129490367 - L1ME1 LINE L1 -2036 4110 3995 * 2332 101 0 0 chr2 121198098 121198396 -129489458 - AluSq SINE Alu -15 298 1 7866 219 58 40 chr2 121200155 121201015 -129486839 - L1MC/D LINE L1 -714 5528 4685 2067 133 3 10 chr2 121201015 121201317 -129486537 - AluSx SINE Alu -12 300 1 7866 219 58 40 chr2 121201317 121201820 -129486034 - L1MC/D LINE L1 -1557 4685 4192 2112 102 26 10 chr2 121201820 121202125 -129485729 - AluY SINE Alu 0 311 2 7866 219 58 40 chr2 121202125 121204004 -129483850 - L1MC/D LINE L1 -2050 4192 2215 1014 173 0 0 chr2 121204053 121204209 -129483645 - AluJo SINE Alu -23 289 134 7185 50 12 6 chr2 121204209 121205880 -129481974 - L1PA6 LINE L1 0 6154 4484 19205 58 4 1 chr2 121205881 121208504 -129479350 + L1PA6 LINE L1 1861 4491 -1655 660 182 42 42 chr2 121208504 121208647 -129479207 - AluJo SINE Alu -169 143 1 21 0 0 0 chr2 121208724 121208745 -129479109 + AT_rich Low_complexity Low_complexity 1 21 0 271 290 85 35 chr2 121208982 121209182 -129478672 - HAL1 LINE L1 -847 1660 1451 694 183 22 104 chr2 121210289 121210544 -129477310 - L1ME3A LINE L1 -274 5896 5654 516 198 36 18 chr2 121210550 121210717 -129477137 - L1MC4 LINE L1 0 8042 7873 1343 82 0 0 chr2 121210916 121211098 -129476756 + L1PA6 LINE L1 5971 6152 -2 31 68 0 0 chr2 121211724 121211783 -129476071 + AT_rich Low_complexity Low_complexity 1 59 0 201 298 70 0 chr2 121212021 121212078 -129475776 + MER91 DNA MER1_type 77 137 -3 855 251 186 0 chr2 121212809 121213098 -129474756 - MLT1G LTR MaLR 0 590 359 2414 92 3 0 chr2 121213098 121213404 -129474450 - AluSp SINE Alu -6 307 1 855 251 186 0 chr2 121213404 121213577 -129474277 - MLT1G LTR MaLR -231 359 4 373 280 131 97 chr2 121214015 121214512 -129473342 - HAL1 LINE L1 -1866 641 128 220 312 104 16 chr2 121215056 121215181 -129472673 + MIR SINE MIR 77 212 -50 405 255 47 13 chr2 121215705 121215854 -129472000 - L1ME3 LINE L1 0 6162 6009 1507 142 67 4 chr2 121215862 121216129 -129471725 - MER7A DNA MER2_type -1 345 64 685 240 0 0 chr2 121216133 121216262 -129471592 + FLAM_A SINE Alu 5 133 0 3978 85 61 7 chr2 121216290 121216876 -129470978 - Charlie3 DNA MER1_type -4 2706 2089 251 167 0 0 chr2 121216893 121216935 -129470919 - Charlie3 DNA MER1_type -1029 1681 1640 5213 134 3 92 chr2 121216935 121218093 -129469761 - L1P LINE L1 -1010 5136 4081 306 360 26 0 chr2 121218101 121218215 -129469639 - L1MEc LINE L1 -5494 902 786 406 194 32 11 chr2 121218230 121218323 -129469531 + MER58 DNA MER1_type 5 99 -242 675 178 0 0 chr2 121218328 121218435 -129469419 - FLAM_C SINE Alu -36 107 1 365 171 61 12 chr2 121218452 121218534 -129469320 + MER58 DNA MER1_type 129 2419 -1 436 419 52 13 chr2 121218857 121219165 -129468689 - L1MEc LINE L1 -5971 425 106 1621 203 3 3 chr2 121219720 121220020 -129467834 - AluJo SINE Alu -12 300 1 341 301 8 32 chr2 121220686 121220809 -129467045 + (CATATA)n Simple_repeat Simple_repeat 5 124 0 2307 101 7 0 chr2 121220953 121221250 -129466604 - AluSc SINE Alu -10 299 1 604 198 119 6 chr2 121221633 121221810 -129466044 - HAL1 LINE L1 -854 1653 1457 413 265 106 138 chr2 121221982 121222224 -129465630 - HAL1 LINE L1 -2112 395 170 2268 103 0 0 chr2 121222224 121222516 -129465338 - AluSg SINE Alu -18 292 1 413 265 106 138 chr2 121222516 121222680 -129465174 - HAL1 LINE L1 -2337 170 2 2425 63 3 0 chr2 121223091 121223392 -129464462 - AluY SINE Alu -9 302 1 599 320 4 26 chr2 121223578 121223806 -129464048 + MLT1H1 LTR MaLR 40 262 -293 1279 221 16 39 chr2 121223824 121224208 -129463646 - L1MEd LINE L1 -3158 2971 2597 21 0 0 0 chr2 121224209 121224230 -129463624 + AT_rich Low_complexity Low_complexity 1 21 0 505 195 0 0 chr2 121224238 121224325 -129463529 - FLAM_A SINE Alu -41 101 15 529 238 45 15 chr2 121224332 121224534 -129463320 - L1M4 LINE L1 -3539 2607 2400 2238 109 0 0 chr2 121224554 121224847 -129463007 - AluSx SINE Alu -19 293 1 274 311 147 11 chr2 121225177 121225354 -129462500 - MIR SINE MIR -16 246 46 2297 110 0 0 chr2 121225355 121225656 -129462198 - AluSx SINE Alu -11 301 1 200 327 91 27 chr2 121225867 121225977 -129461877 - MER5A DNA MER1_type -38 151 35 862 179 10 66 chr2 121226347 121226543 -129461311 + MER20 DNA MER1_type 31 215 -4 1787 175 7 14 chr2 121226608 121226899 -129460955 + AluJo SINE Alu 5 293 -19 527 266 42 37 chr2 121227396 121227637 -129460217 - L1ME3A LINE L1 -4 6166 5925 532 229 97 83 chr2 121227745 121228125 -129459729 + MLT1H1 LTR MaLR 1 368 -174 899 246 120 9 chr2 121228282 121228615 -129459239 - L1ME3A LINE L1 -374 5796 5427 258 82 197 16 chr2 121228669 121228730 -129459124 - Tigger3(Golem) DNA MER2_type -2684 345 274 * 573 167 0 10 chr2 121228729 121228831 -129459023 - Tigger3(Golem) DNA MER2_type -2928 101 1 248 212 15 30 chr2 121228832 121228898 -129458956 + L1M4 LINE L1 4050 4114 -2032 257 211 40 13 chr2 121228998 121229074 -129458780 - L1MEd LINE L1 -3594 2535 2458 258 135 90 90 chr2 121229079 121229168 -129458686 - L1MB7 LINE L1 -10 6174 6086 2945 197 37 7 chr2 121229179 121229889 -129457965 - L1MB4 LINE L1 -6 6174 5444 1069 219 59 46 chr2 121229961 121230142 -129457712 - L1MB4 LINE L1 -1071 5075 4898 2612 114 42 47 chr2 121230142 121230346 -129457508 + MSTA LTR MaLR 1 204 -224 1934 98 43 0 chr2 121230346 121230622 -129457232 - AluSx SINE Alu -24 288 1 2612 114 42 47 chr2 121230622 121230847 -129457007 + MSTA LTR MaLR 204 428 0 1831 154 17 60 chr2 121230853 121231204 -129456650 - MER1B DNA MER1_type 0 337 2 1069 219 59 46 chr2 121231204 121231407 -129456447 - L1MB4 LINE L1 -1252 4894 4679 700 239 58 8 chr2 121231405 121231665 -129456189 - L1MEd LINE L1 -3687 2442 2170 * 276 320 32 8 chr2 121231668 121231793 -129456061 - L1MEd LINE L1 -5466 653 526 498 333 94 11 chr2 121232235 121232511 -129455343 - L1M4 LINE L1 -949 5197 4899 485 292 134 36 chr2 121232507 121232971 -129454883 - L1M4 LINE L1 -2244 3902 3390 * 271 276 71 40 chr2 121233019 121233306 -129454548 - L1 LINE L1 -1140 5006 4713 * 308 286 168 50 chr2 121233302 121233857 -129453997 - L1MEd LINE L1 -5264 855 236 1381 107 33 25 chr2 121233890 121234134 -129453720 - L1MA4A LINE L1 -4 6299 6054 548 172 97 14 chr2 121234241 121234386 -129453468 - L1MEd LINE L1 -5959 160 4 774 247 53 8 chr2 121234517 121234764 -129453090 + MIR SINE MIR 3 260 -2 2116 109 7 0 chr2 121235056 121235341 -129452513 - AluSg SINE Alu -23 287 1 2491 80 0 0 chr2 121235648 121235950 -129451904 + AluY SINE Alu 1 302 -9 6083 164 111 72 chr2 121236308 121237882 -129449972 + MER52A LTR ERV1 1 1634 -121 373 75 0 0 chr2 121238071 121238124 -129449730 - L1PA11 LINE L1 -1 6173 6121 615 194 0 8 chr2 121238141 121238265 -129449589 + MER52A LTR ERV1 1633 1755 0 296 387 28 80 chr2 121238829 121239193 -129448661 + L2 LINE L2 2920 3264 -8 5884 80 56 14 chr2 121239966 121241005 -129446849 - L1PA11 LINE L1 -2 6172 5098 27 29 0 0 chr2 121241031 121241065 -129446789 + AT_rich Low_complexity Low_complexity 1 34 0 255 301 14 0 chr2 121241172 121241245 -129446609 + (TATATG)n Simple_repeat Simple_repeat 2 75 0 300 291 84 62 chr2 121241408 121241587 -129446267 - L1ME LINE L1 -442 6490 6308 197 314 190 8 chr2 121241914 121242035 -129445819 - MIR SINE MIR -56 206 64 304 200 86 38 chr2 121242245 121242350 -129445504 - L1MC5 LINE L1 -31 7930 7821 730 232 28 63 chr2 121242514 121242798 -129445056 - L1MD2 LINE L1 -15 6344 6071 550 222 56 6 chr2 121242806 121242986 -129444868 - L1ME LINE L1 -2105 4852 4664 4122 68 59 35 chr2 121243095 121243786 -129444068 - SVA Other Other -246 1140 433 1094 186 0 23 chr2 121243905 121244169 -129443685 - SVA Other Other -520 866 609 5325 86 29 59 chr2 121244429 121245958 -129441896 - SVA Other Other -518 868 1 2800 242 78 30 chr2 121245961 121247778 -129440076 - L1M4b LINE L1 -2575 4382 2478 284 162 0 15 chr2 121247810 121247878 -129439976 + (TA)n Simple_repeat Simple_repeat 1 67 0 351 0 0 0 chr2 121247941 121247980 -129439874 + (CA)n Simple_repeat Simple_repeat 2 40 0 2420 84 7 0 chr2 121247994 121248293 -129439561 - AluSp SINE Alu -12 301 1 4014 236 108 44 chr2 121248305 121248825 -129439029 - L1M4b LINE L1 -4551 2408 1923 2540 67 0 13 chr2 121248825 121249140 -129438714 - AluY SINE Alu 0 311 1 4014 236 108 44 chr2 121249140 121249259 -129438595 - L1M4b LINE L1 -5036 1923 1813 2332 114 0 0 chr2 121249259 121249566 -129438288 - AluSg SINE Alu -3 307 1 4014 236 108 44 chr2 121249566 121249962 -129437892 - L1M4b LINE L1 -5146 1813 1444 1752 168 7 13 chr2 121249962 121250266 -129437588 - AluJb SINE Alu -6 306 5 4014 236 108 44 chr2 121250266 121251487 -129436367 - L1M4b LINE L1 -5515 1444 31 1235 213 30 36 chr2 121251498 121251860 -129435994 - L1MDa LINE L1 -2289 4251 3892 2607 194 60 53 chr2 121251873 121252593 -129435261 - MER50 LTR ERV1 0 734 10 269 203 38 38 chr2 121252642 121252721 -129435133 - L1MDa LINE L1 -2697 3843 3765 1196 213 25 11 chr2 121252872 121253167 -129434687 + LTR10B LTR ERV1 307 547 0 1858 212 106 26 chr2 121253188 121253509 -129434345 - L1MDa LINE L1 -2868 3672 3378 266 0 29 0 chr2 121253509 121253543 -129434311 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1858 212 106 26 chr2 121253543 121253918 -129433936 - L1MDa LINE L1 -3162 3378 2920 821 219 68 93 chr2 121253979 121254495 -129433359 - L1MDa LINE L1 -4037 2503 2001 3178 168 63 21 chr2 121254495 121255113 -129432741 - LTR9B LTR ERV1 0 644 1 14096 144 12 8 chr2 121255113 121256465 -129431389 - HUERS-P3 LTR ERV1 -1 8918 7573 2294 98 0 3 chr2 121256465 121256771 -129431083 - AluY SINE Alu -6 305 1 14096 144 12 8 chr2 121256771 121257739 -129430115 - HUERS-P3 LTR ERV1 -1346 7573 4825 27 0 0 0 chr2 121257744 121257771 -129430083 + AT_rich Low_complexity Low_complexity 1 27 0 1998 87 0 11 chr2 121257886 121258152 -129429702 + AluSx SINE Alu 39 301 -11 420 139 40 89 chr2 121258152 121258253 -129429601 - LTR9B LTR ERV1 -548 96 1 2419 198 53 75 chr2 121258254 121258437 -129429417 - L1MDa LINE L1 -4537 2003 1818 2344 168 41 5 chr2 121258437 121258848 -129429006 + MSTB LTR MaLR 1 426 0 2419 198 53 75 chr2 121258848 121259241 -129428613 - L1MDa LINE L1 -4722 1818 1418 1981 110 55 7 chr2 121259241 121259533 -129428321 - AluY SINE Alu -5 306 1 2419 198 53 75 chr2 121259533 121259971 -129427883 - L1MDa LINE L1 -5122 1418 1010 237 322 38 90 chr2 121260183 121260394 -129427460 - L1MDa LINE L1 -5913 627 428 623 289 108 17 chr2 121260418 121260650 -129427204 - L1MDa LINE L1 -6093 447 195 353 273 43 68 chr2 121260712 121260873 -129426981 + MER5B DNA MER1_type 22 178 0 392 312 126 8 chr2 121260974 121261237 -129426617 + MLT1L LTR MaLR 317 610 -5 1174 216 102 46 chr2 121261293 121261358 -129426496 - MSTB2 LTR MaLR -8 449 389 2248 102 0 16 chr2 121261358 121261662 -129426192 + AluSq SINE Alu 1 299 -14 1174 216 102 46 chr2 121261662 121262007 -129425847 - MSTB2 LTR MaLR -68 389 16 23 54 0 0 chr2 121262585 121262622 -129425232 + AT_rich Low_complexity Low_complexity 1 37 0 797 108 69 0 chr2 121262913 121263043 -129424811 - MER85 DNA T2_type 0 139 1 1096 192 70 34 chr2 121264544 121264988 -129422866 - LTR56 LTR ERV1 -11 565 1 343 295 211 12 chr2 121265517 121265683 -129422171 - MIR3 SINE MIR -6 202 4 494 280 44 50 chr2 121265964 121266146 -129421708 - MIR SINE MIR -72 190 10 200 200 18 0 chr2 121266338 121266393 -129421461 + (TATATG)n Simple_repeat Simple_repeat 4 59 0 201 329 79 0 chr2 121266634 121266710 -129421144 + L2 LINE L2 3189 3270 -2 841 255 0 11 chr2 121267014 121267202 -129420652 - MER5A DNA MER1_type -2 187 2 503 229 41 24 chr2 121268104 121268274 -129419580 - L1M4 LINE L1 -1757 4389 4217 279 222 63 0 chr2 121268278 121268341 -129419513 - L1M4 LINE L1 -2280 3866 3800 1052 241 10 37 chr2 121268355 121268654 -129419200 - L1M4 LINE L1 -1829 4317 4027 319 214 24 12 chr2 121268700 121268784 -129419070 + L1ME2 LINE L1 3926 4010 -2136 242 170 2 0 chr2 121268801 121268850 -129419004 + L1ME2 LINE L1 5409 5451 -711 744 226 46 36 chr2 121268889 121269053 -129418801 + L1ME2 LINE L1 5449 5610 -554 3806 88 0 6 chr2 121269053 121269567 -129418287 + MER9 LTR ERVK 1 511 0 744 226 46 36 chr2 121269567 121269972 -129417882 + L1ME2 LINE L1 5610 6133 -31 321 241 132 97 chr2 121269963 121270220 -129417634 - L1ME LINE L1 -5534 536 271 * 308 271 35 0 chr2 121270280 121270365 -129417489 - L1ME LINE L1 -5887 183 96 541 312 147 21 chr2 121270861 121271909 -129415945 + L1MC/D LINE L1 4408 5597 -803 249 181 48 24 chr2 121271938 121272021 -129415833 + L1MC/D LINE L1 5701 5785 -2023 807 178 0 0 chr2 121272022 121272151 -129415703 + 7SLRNA srpRNA srpRNA 1 129 -191 212 294 82 24 chr2 121272406 121272491 -129415363 - MER5B DNA MER1_type -11 167 78 237 173 27 27 chr2 121272675 121272750 -129415104 + T-rich Low_complexity Low_complexity 3 77 0 234 253 176 22 chr2 121273319 121273410 -129414444 + L2 LINE L2 3208 3312 -1 767 182 31 50 chr2 121273606 121273765 -129414089 - AluJb SINE Alu -28 284 129 368 244 283 33 chr2 121273832 121274012 -129413842 + L1M4c LINE L1 1334 1558 -4826 1179 163 15 0 chr2 121274537 121274740 -129413114 + L1MB7 LINE L1 5625 5830 -354 * 1458 201 40 7 chr2 121274730 121275028 -129412826 + L1MB7 LINE L1 5436 5743 -441 1577 225 8 0 chr2 121275031 121275391 -129412463 + L1MB7 LINE L1 5806 6168 -16 902 268 60 17 chr2 121275405 121275752 -129412102 - L1MC/D LINE L1 -2183 5625 5264 236 128 0 21 chr2 121276257 121276304 -129411550 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 608 300 181 18 chr2 121276343 121277045 -129410809 - L2 LINE L2 -16 3297 2476 393 22 0 0 chr2 121277499 121277545 -129410309 + (TG)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr2 121279089 121279110 -129408744 + AT_rich Low_complexity Low_complexity 1 21 0 2490 62 0 0 chr2 121279211 121279519 -129408335 + AluY SINE Alu 1 308 -3 656 253 12 29 chr2 121279886 121280056 -129407798 - MER5B DNA MER1_type 0 178 12 322 266 72 20 chr2 121280544 121280659 -129407195 - MIR SINE MIR -61 147 44 2039 62 0 40 chr2 121280826 121281099 -129406755 - AluY SINE Alu -10 301 40 24 32 0 0 chr2 121282845 121282876 -129404978 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 121283418 121283440 -129404414 + AT_rich Low_complexity Low_complexity 1 22 0 2021 172 17 0 chr2 121283454 121283808 -129404046 + MER46B DNA MER2_type 1 235 -1 23 0 0 0 chr2 121283862 121283885 -129403969 + AT_rich Low_complexity Low_complexity 1 23 0 749 285 31 12 chr2 121283988 121284244 -129403610 + MIR SINE MIR 2 262 0 2352 57 3 0 chr2 121284314 121284596 -129403258 - AluY SINE Alu -28 283 1 1351 207 52 7 chr2 121284596 121284886 -129402968 + MER58B DNA MER1_type 39 341 0 23 0 0 0 chr2 121285159 121285182 -129402672 + AT_rich Low_complexity Low_complexity 1 23 0 235 279 105 12 chr2 121285408 121285494 -129402360 - MER5A DNA MER1_type 0 189 96 616 237 78 78 chr2 121285509 121285754 -129402100 - MER5C DNA MER1_type -5 319 75 23 0 0 0 chr2 121286539 121286562 -129401292 + AT_rich Low_complexity Low_complexity 1 23 0 1449 203 14 0 chr2 121287602 121287878 -129399976 + AluJo SINE Alu 1 280 -32 11801 192 88 20 chr2 121287879 121289536 -129398318 - L1 LINE L1 -1099 5749 4206 2402 61 0 3 chr2 121289536 121289833 -129398021 + AluY SINE Alu 1 296 -15 11801 192 88 20 chr2 121289833 121291718 -129396136 - L1 LINE L1 -2642 4206 1887 1970 100 4 7 chr2 121291718 121292010 -129395844 - AluSx SINE Alu 0 307 17 11801 192 88 20 chr2 121292010 121292422 -129395432 - L1 LINE L1 -4961 1887 1504 261 291 73 36 chr2 121292427 121292537 -129395317 - L2 LINE L2 -55 3258 3145 774 191 40 83 chr2 121292537 121292789 -129395065 + L1ME3 LINE L1 5897 6137 -25 2583 277 152 30 chr2 121292825 121293112 -129394742 - L2 LINE L2 -163 3150 2899 1639 180 3 26 chr2 121293112 121293423 -129394431 - AluJo SINE Alu 0 312 9 2583 277 152 30 chr2 121293423 121294370 -129393484 - L2 LINE L2 -414 2899 1751 810 228 6 6 chr2 121294371 121294542 -129393312 - MIR SINE MIR 0 262 92 395 298 69 0 chr2 121295246 121295377 -129392477 + L1ME4a LINE L1 5436 5575 -2233 245 140 20 40 chr2 121295459 121295509 -129392345 + L1ME4a LINE L1 5969 6017 -104 1758 86 66 0 chr2 121295798 121296042 -129391812 + AluSq SINE Alu 39 298 -15 2370 51 14 0 chr2 121296042 121296334 -129391520 + AluY SINE Alu 1 296 -15 239 286 13 0 chr2 121296351 121296428 -129391426 + Charlie7 DNA MER1_type 25 102 -2510 26 0 0 0 chr2 121296609 121296635 -129391219 + AT_rich Low_complexity Low_complexity 1 26 0 2043 219 115 52 chr2 121296715 121297332 -129390522 - L1MC5 LINE L1 -447 7514 6829 1885 145 3 43 chr2 121297332 121297636 -129390218 - AluSx SINE Alu -20 292 1 2043 219 115 52 chr2 121297636 121297850 -129390004 - L1MC5 LINE L1 -1132 6829 6630 451 233 60 17 chr2 121298319 121298435 -129389419 + MER5C DNA MER1_type 4 124 -200 419 189 0 21 chr2 121298444 121298539 -129389315 + MER5C DNA MER1_type 230 322 -2 183 80 0 0 chr2 121298678 121298703 -129389151 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 223 245 75 0 chr2 121300531 121300584 -129387270 + L2 LINE L2 2992 3048 -224 23 0 0 0 chr2 121301252 121301275 -129386579 + AT_rich Low_complexity Low_complexity 1 23 0 3088 212 91 24 chr2 121301434 121302895 -129384959 + L1ME1 LINE L1 474 2129 -4616 8397 214 157 51 chr2 121302900 121303959 -129383895 + L1M2 LINE L1 1 946 -5902 234 0 0 0 chr2 121303959 121303985 -129383869 + (CA)n Simple_repeat Simple_repeat 2 27 0 8397 214 157 51 chr2 121303985 121306624 -129381230 + L1M2 LINE L1 946 3303 -3545 594 212 68 0 chr2 121306624 121306756 -129381098 + FLAM_A SINE Alu 2 142 0 8397 214 157 51 chr2 121306756 121307729 -129380125 + L1M2 LINE L1 3303 4171 -2677 1625 187 0 31 chr2 121307729 121308023 -129379831 + AluJo SINE Alu 12 296 -16 8397 214 157 51 chr2 121308023 121308705 -129379149 + L1M2 LINE L1 4171 6073 -775 10761 131 69 9 chr2 121308706 121310539 -129377315 + Tigger1 DNA MER2_type 62 2004 -414 1160 186 65 8 chr2 121310558 121310821 -129377033 + Tigger1 DNA MER2_type 2141 2418 0 2512 247 60 37 chr2 121310822 121310919 -129376935 + L1M4 LINE L1 3280 3373 -2773 1970 126 16 49 chr2 121310919 121311307 -129376547 + THE1C LTR MaLR 1 375 0 2512 247 60 37 chr2 121311307 121312144 -129375710 + L1M4 LINE L1 3373 4235 -1911 255 280 11 11 chr2 121312131 121312224 -129375630 + L1ME1 LINE L1 2670 2762 -3802 * 1925 243 26 37 chr2 121312227 121312853 -129375001 + L1ME1 LINE L1 5962 6580 -4 245 158 0 0 chr2 121312878 121312916 -129374938 + tRNA-Gly-GGA tRNA tRNA 1 38 -37 2760 200 112 31 chr2 121313120 121313885 -129373969 - L1MB7 LINE L1 -24 6160 5334 763 161 0 0 chr2 121313909 121314027 -129373827 + FLAM_A SINE Alu 1 118 -15 282 267 112 0 chr2 121314140 121314301 -129373553 + L1M4 LINE L1 2179 2357 -3789 261 0 0 0 chr2 121314649 121314678 -129373176 + (T)n Simple_repeat Simple_repeat 1 29 0 23 54 0 0 chr2 121315197 121315234 -129372620 + AT_rich Low_complexity Low_complexity 1 37 0 1816 146 0 30 chr2 121316320 121316621 -129371233 + AluJo SINE Alu 10 301 -11 750 192 13 32 chr2 121316634 121316790 -129371064 + FRAM SINE Alu 8 160 -16 233 196 43 43 chr2 121316874 121316889 -129370965 - L1MA10 LINE L1 0 6334 6320 1350 233 44 76 chr2 121316889 121317388 -129370466 - L1ME3A LINE L1 -8 6162 5680 258 294 78 10 chr2 121317542 121317644 -129370210 - MIR SINE MIR -1 261 153 442 191 21 21 chr2 121317720 121317814 -129370040 + U13 snRNA snRNA 1 94 -10 1799 169 16 0 chr2 121317854 121318161 -129369693 + AluSx SINE Alu 1 312 0 338 260 47 40 chr2 121318650 121318800 -129369054 + L1ME3A LINE L1 5049 5199 -947 1894 236 110 28 chr2 121318858 121319631 -129368223 + L1ME3A LINE L1 5318 6161 -9 2028 128 3 3 chr2 121319950 121320247 -129367607 + AluSx SINE Alu 7 303 -9 189 291 19 58 chr2 121320741 121320844 -129367010 + MER5A DNA MER1_type 88 186 -3 2096 111 3 19 chr2 121321401 121321716 -129366138 + AluSx SINE Alu 1 310 -2 23 0 0 0 chr2 121322615 121322638 -129365216 + AT_rich Low_complexity Low_complexity 1 23 0 270 203 14 0 chr2 121322795 121322864 -129364990 - L1MA10 LINE L1 -4 6330 6261 * 1715 269 67 6 chr2 121322862 121323491 -129364363 - L1M4 LINE L1 -2275 3871 3205 1491 177 31 3 chr2 121323495 121323783 -129364071 + AluJo SINE Alu 1 296 -16 739 243 14 129 chr2 121323843 121324258 -129363596 + HAL1b LINE L1 462 825 -523 2360 67 0 7 chr2 121324258 121324556 -129363298 + AluY SINE Alu 5 300 -11 739 243 14 129 chr2 121324556 121324581 -129363273 + HAL1b LINE L1 825 851 -497 260 305 85 35 chr2 121324676 121324935 -129362919 + HAL1b LINE L1 1064 1335 -13 516 231 0 48 chr2 121325208 121325355 -129362499 - LTR33A LTR ERVL -1 522 383 306 89 22 0 chr2 121325429 121325474 -129362380 + MLT2E LTR ERVL 583 628 0 2088 104 17 10 chr2 121327511 121327809 -129360045 - AluSx SINE Alu -12 300 1 471 349 38 15 chr2 121327822 121328083 -129359771 - L2 LINE L2 -575 2739 2473 219 313 0 15 chr2 121328918 121328985 -129358869 + MIR3 SINE MIR 134 199 -9 1876 155 13 7 chr2 121331842 121332146 -129355708 - AluJo SINE Alu 0 312 7 25 51 0 0 chr2 121332791 121332830 -129355024 + AT_rich Low_complexity Low_complexity 1 39 0 1634 164 59 3 chr2 121333810 121334096 -129353758 + AluSx SINE Alu 1 302 -10 502 247 309 5 chr2 121334544 121334738 -129353116 + MIR SINE MIR 1 253 -9 285 279 13 142 chr2 121334846 121335079 -129352775 - MIR3 SINE MIR -3 205 3 2357 58 0 0 chr2 121336426 121336719 -129351135 - AluY SINE Alu -18 293 1 1882 124 82 25 chr2 121336763 121337118 -129350736 + THE1C LTR MaLR 1 375 0 182 326 0 23 chr2 121337411 121337497 -129350357 - MIR SINE MIR -56 206 123 948 178 0 28 chr2 121338202 121338382 -129349472 + FAM SINE Alu 1 175 0 2497 73 0 0 chr2 121338542 121338844 -129349010 - AluY SINE Alu -9 302 1 675 253 51 17 chr2 121339337 121339515 -129348339 + MIR SINE MIR 1 184 -78 1916 153 0 13 chr2 121339714 121340022 -129347832 - AluJb SINE Alu -8 304 1 1048 192 9 36 chr2 121340876 121341095 -129346759 - AluJo SINE Alu -15 297 85 234 0 0 0 chr2 121341830 121341856 -129345998 + (TG)n Simple_repeat Simple_repeat 2 27 0 410 291 81 29 chr2 121342295 121342505 -129345349 - Charlie8 DNA MER1_type -2152 265 45 940 266 10 65 chr2 121343819 121343992 -129343862 - MLT1I LTR MaLR -67 342 190 2446 66 0 22 chr2 121343992 121344310 -129343544 - AluY SINE Alu 0 311 1 940 266 10 65 chr2 121344310 121344426 -129343428 - MLT1I LTR MaLR -219 190 69 28 29 0 0 chr2 121345281 121345316 -129342538 + AT_rich Low_complexity Low_complexity 1 35 0 464 73 0 0 chr2 121345961 121346029 -129341825 + L1PA4 LINE L1 6087 6154 -1 1347 195 19 28 chr2 121346049 121346367 -129341487 + L1MB7 LINE L1 5869 6183 -1 205 274 143 36 chr2 121346451 121346535 -129341319 - L2 LINE L2 -30 3242 3150 288 0 0 0 chr2 121348176 121348208 -129339646 + (CA)n Simple_repeat Simple_repeat 1 32 0 25 0 0 0 chr2 121348540 121348565 -129339289 + AT_rich Low_complexity Low_complexity 1 25 0 457 311 77 14 chr2 121348565 121348851 -129339003 + HAL1 LINE L1 2204 2507 0 238 152 0 121 chr2 121349313 121349379 -129338475 + L1ME4a LINE L1 6062 6119 -2 1653 182 14 18 chr2 121349975 121350261 -129337593 + AluJo SINE Alu 1 285 -27 2289 184 80 12 chr2 121351215 121352120 -129335734 - Tigger6a DNA MER2_type -7 1076 1 549 299 168 25 chr2 121352587 121352960 -129334894 + L2 LINE L2 2662 3088 -225 189 150 0 50 chr2 121352974 121353014 -129334840 + L2 LINE L2 3276 3313 0 542 329 161 18 chr2 121353161 121353547 -129334307 - L3 LINE CR1 -5 1572 1132 430 299 134 5 chr2 121354078 121354265 -129333589 - MIR SINE MIR 0 262 52 1155 322 61 18 chr2 121354835 121355279 -129332575 + MER115 DNA AcHobo 227 689 -4 2460 59 0 0 chr2 121356071 121356398 -129331456 + AluY SINE Alu 1 327 0 724 207 0 15 chr2 121356651 121356786 -129331068 - FLAM_A SINE Alu 0 133 1 1033 81 0 75 chr2 121358100 121358261 -129329593 + MER1B DNA MER1_type 190 338 -1 495 234 144 0 chr2 121358342 121358509 -129329345 - L1MC5 LINE L1 -44 7917 7727 1020 159 36 73 chr2 121358802 121359022 -129328832 + AluJb SINE Alu 87 298 -14 396 202 0 32 chr2 121359102 121359196 -129328658 - L1MC5 LINE L1 -54 7907 7817 2796 222 36 9 chr2 121359257 121359891 -129327963 + MER82 DNA MER2_type 2 652 -1 651 171 16 16 chr2 121360134 121360263 -129327591 + BC200 scRNA scRNA 1 129 -71 750 258 28 9 chr2 121360287 121360504 -129327350 - MER46C DNA MER2_type -36 302 82 512 96 41 0 chr2 121361173 121361246 -129326608 + AluJ/FLAM SINE Alu 1 76 -236 182 303 0 30 chr2 121361768 121361834 -129326020 + MIR SINE MIR 199 262 0 3866 186 72 19 chr2 121361859 121362758 -129325096 + L1MB8 LINE L1 5237 6178 0 2337 88 3 0 chr2 121362849 121363143 -129324711 + AluSq SINE Alu 1 295 -18 26 88 0 0 chr2 121363165 121363233 -129324621 + AT_rich Low_complexity Low_complexity 1 68 0 30 0 0 0 chr2 121363253 121363283 -129324571 + AT_rich Low_complexity Low_complexity 1 30 0 201 314 173 44 chr2 121364832 121365058 -129322796 - MIR SINE MIR -4 258 4 3603 115 37 14 chr2 121365541 121366130 -129321724 - LTR26 LTR ERV1 0 603 1 265 208 0 39 chr2 121366522 121366599 -129321255 + HsTC2 DNA Tc2 5 78 -1820 1140 175 47 140 chr2 121366623 121366940 -129320914 - MLT1A1 LTR MaLR 0 365 91 1835 156 7 3 chr2 121366940 121367229 -129320625 - AluJb SINE Alu -17 295 6 1140 175 47 140 chr2 121367229 121367312 -129320542 - MLT1A1 LTR MaLR -274 91 2 2216 89 7 10 chr2 121367842 121368135 -129319719 + AluSx SINE Alu 3 294 -18 23 0 0 0 chr2 121368388 121368411 -129319443 + AT_rich Low_complexity Low_complexity 1 23 0 251 209 0 0 chr2 121368781 121368824 -129319030 + MER58A DNA MER1_type 1 43 -181 1008 205 57 14 chr2 121369050 121369260 -129318594 + MER58A DNA MER1_type 1 219 -5 2407 50 0 17 chr2 121369451 121369749 -129318105 + AluY SINE Alu 1 293 -18 1721 168 41 7 chr2 121369966 121370258 -129317596 - AluJo SINE Alu -10 302 1 555 174 192 52 chr2 121370261 121370494 -129317360 - L1MC5 LINE L1 -36 7925 7643 2527 68 0 0 chr2 121370494 121370803 -129317051 - AluY SINE Alu -2 309 1 555 174 192 52 chr2 121370803 121370856 -129316998 - L1MC5 LINE L1 -318 7643 7599 3679 244 85 48 chr2 121370867 121370992 -129316862 - L1MB7 LINE L1 0 6184 6065 2339 93 6 0 chr2 121370992 121371303 -129316551 - AluSp SINE Alu 0 313 1 3679 244 85 48 chr2 121371303 121371987 -129315867 - L1MB7 LINE L1 -119 6065 5408 1870 155 139 16 chr2 121371987 121372368 -129315486 - MSTA LTR MaLR 0 428 1 3679 244 85 48 chr2 121372368 121373926 -129313928 - L1MB7 LINE L1 -776 5408 3717 2921 151 66 0 chr2 121373951 121374469 -129313385 - L1MB2 LINE L1 -3 6168 5617 2116 217 90 71 chr2 121374490 121375139 -129312715 - L1MC5 LINE L1 -368 7593 6899 2125 97 11 0 chr2 121375139 121375454 -129312400 - AluSp SINE Alu 0 318 1 2116 217 90 71 chr2 121375454 121375831 -129312023 - L1MC5 LINE L1 -1062 6899 6531 213 39 0 0 chr2 121376042 121376068 -129311786 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 467 167 13 0 chr2 121376073 121376151 -129311703 - AluJb SINE Alu -25 287 209 1307 259 66 33 chr2 121376277 121376791 -129311063 - L1MC5 LINE L1 -1866 5942 5412 25 51 0 0 chr2 121378826 121378865 -129308989 + AT_rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr2 121383507 121383536 -129304318 + AT_rich Low_complexity Low_complexity 1 29 0 2368 80 0 13 chr2 121385016 121385317 -129302537 + AluSc SINE Alu 1 297 -12 931 254 97 28 chr2 121385769 121386159 -129301695 - L1MC4a LINE L1 -1890 5918 5502 1561 155 45 58 chr2 121386835 121387039 -129300815 - AluJb SINE Alu 0 312 131 194 0 39 0 chr2 121387039 121387065 -129300789 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1561 155 45 58 chr2 121387065 121387195 -129300659 - AluJb SINE Alu -181 131 1 893 174 72 47 chr2 121387602 121387838 -129300016 - AluJo SINE Alu 0 312 71 344 172 31 0 chr2 121387843 121387907 -129299947 + AluJ/FRAM SINE Alu 233 298 -4 613 214 129 25 chr2 121387907 121388108 -129299746 + L1ME1 LINE L1 1369 1590 -4794 1620 184 0 33 chr2 121388123 121388422 -129299432 + AluJo SINE Alu 1 289 -23 8075 184 82 41 chr2 121388423 121389739 -129298115 + L1ME1 LINE L1 3536 4797 -1751 2397 87 3 0 chr2 121389739 121390039 -129297815 + AluSp SINE Alu 1 301 -12 8075 184 82 41 chr2 121390039 121390541 -129297313 + L1ME1 LINE L1 4797 5277 -1271 2147 111 3 10 chr2 121390541 121390839 -129297015 - AluSx SINE Alu -3 309 14 8075 184 82 41 chr2 121390839 121391339 -129296515 + L1ME1 LINE L1 5277 5985 -563 2107 123 3 16 chr2 121391339 121391655 -129296199 + AluSx SINE Alu 1 312 0 8075 184 82 41 chr2 121391655 121391858 -129295996 + L1ME1 LINE L1 5985 6178 -370 1742 185 0 7 chr2 121391866 121392158 -129295696 + AluJb SINE Alu 3 292 -20 2742 175 74 16 chr2 121392200 121392590 -129295264 + L1MC2 LINE L1 5254 5691 -653 2056 119 34 0 chr2 121392590 121392884 -129294970 + AluSc SINE Alu 1 304 -5 2742 175 74 16 chr2 121392884 121393075 -129294779 + L1MC2 LINE L1 5691 5869 -475 1972 149 65 67 chr2 121393552 121393810 -129294044 + L1MC2 LINE L1 5858 6116 -228 2224 89 13 10 chr2 121393810 121394114 -129293740 + AluSx SINE Alu 1 305 -7 1972 149 65 67 chr2 121394114 121394331 -129293523 + L1MC2 LINE L1 6116 6332 -12 548 235 118 32 chr2 121394346 121394533 -129293321 + L2 LINE L2 3075 3277 -36 955 157 6 13 chr2 121394773 121394932 -129292922 - AluJo SINE Alu -22 290 133 297 0 0 0 chr2 121394943 121394976 -129292878 + (CA)n Simple_repeat Simple_repeat 1 66 0 297 0 0 0 chr2 121394976 121395009 -129292845 + (CA)n Simple_repeat Simple_repeat 2 34 0 791 150 8 8 chr2 121395031 121395164 -129292690 - AluJo SINE Alu -169 133 1 258 32 0 0 chr2 121395166 121395197 -129292657 + (TTTC)n Simple_repeat Simple_repeat 3 33 0 1846 136 0 31 chr2 121395199 121395485 -129292369 - AluSx SINE Alu -35 277 1 2079 104 49 0 chr2 121395496 121395784 -129292070 - AluSg SINE Alu -8 302 1 534 57 0 3 chr2 121395854 121396087 -129291767 - AluY SINE Alu 0 309 2 328 265 129 0 chr2 121396397 121396529 -129291325 + L1MEc LINE L1 2123 2271 -4125 345 250 65 3 chr2 121396532 121396667 -129291187 + L1ME1 LINE L1 6191 6335 -96 264 112 90 0 chr2 121396674 121396738 -129291116 + AluSg SINE Alu 1 46 -256 4626 118 17 33 chr2 121396738 121398116 -129289738 + pTR5 LTR ERV1 769 2438 0 2071 88 0 4 chr2 121398119 121398381 -129289473 + AluSg SINE Alu 31 291 -19 1281 263 102 4 chr2 121398447 121398926 -129288928 - L1M4 LINE L1 -1702 4942 4417 624 186 142 11 chr2 121398922 121399105 -129288749 + L1M4 LINE L1 4936 5142 -1502 * 1140 138 0 0 chr2 121399126 121399286 -129288568 + AluSg/x SINE Alu 127 286 -24 26 30 0 0 chr2 121399286 121399319 -129288535 + AT_rich Low_complexity Low_complexity 1 33 0 2218 113 0 0 chr2 121399448 121399754 -129288100 + AluSx SINE Alu 1 306 0 22 0 0 0 chr2 121399783 121399805 -129288049 + AT_rich Low_complexity Low_complexity 1 22 0 1396 170 0 89 chr2 121399809 121400133 -129287721 + AluJo SINE Alu 1 295 -17 24 0 0 0 chr2 121400141 121400165 -129287689 + AT_rich Low_complexity Low_complexity 1 24 0 247 271 77 26 chr2 121400314 121400469 -129287385 - L1 LINE L1 -1527 4619 4457 1907 129 3 20 chr2 121400616 121400919 -129286935 - AluSq SINE Alu -15 298 1 2197 207 24 19 chr2 121400919 121401272 -129286582 - L1M4 LINE L1 -4788 1858 1494 1094 218 33 126 chr2 121401272 121401787 -129286067 - MLT1C LTR MaLR 0 467 1 2197 207 24 19 chr2 121401787 121402083 -129285771 - L1M4 LINE L1 -5152 1494 1201 469 200 0 0 chr2 121402093 121402183 -129285671 - AluJ SINE Alu -13 299 210 826 167 13 13 chr2 121402183 121402333 -129285521 - AluJ SINE Alu -162 150 1 3588 217 61 49 chr2 121402334 121402514 -129285340 - L1M4 LINE L1 -5327 1215 1038 2961 51 5 20 chr2 121402514 121402904 -129284950 + L1PA8 LINE L1 5787 6170 -2 3588 217 61 49 chr2 121402904 121403175 -129284679 - L1M4 LINE L1 -5504 1038 771 352 0 0 0 chr2 121403175 121403214 -129284640 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1804 125 32 21 chr2 121403214 121403493 -129284361 - AluSx SINE Alu -30 282 1 3588 217 61 49 chr2 121403493 121403823 -129284031 - L1M4 LINE L1 -5771 771 446 2003 138 3 0 chr2 121403823 121404127 -129283727 - AluSx SINE Alu 0 305 1 3588 217 61 49 chr2 121404127 121404521 -129283333 - L1M4 LINE L1 -6096 446 13 295 172 0 17 chr2 121404585 121404643 -129283211 + MARNA DNA Mariner 303 359 -227 2259 119 0 0 chr2 121404804 121405114 -129282740 - AluSx SINE Alu -2 310 1 396 314 8 8 chr2 121405128 121405249 -129282605 - MIR SINE MIR -113 149 29 338 230 89 89 chr2 121405525 121405585 -129282269 - MIR3 SINE MIR -6 202 143 2216 102 7 7 chr2 121405585 121405889 -129281965 - AluSx SINE Alu -8 304 1 338 230 89 89 chr2 121405889 121405963 -129281891 - MIR3 SINE MIR -64 144 68 267 282 24 0 chr2 121406069 121406154 -129281700 + MER5A DNA MER1_type 9 95 -94 2257 111 7 0 chr2 121407038 121407344 -129280510 - AluSp SINE Alu -5 308 1 2090 77 0 25 chr2 121407364 121407675 -129280179 - AluSc SINE Alu 0 315 12 338 212 13 133 chr2 121408029 121408135 -129279719 + L3 LINE CR1 1209 1293 -284 512 209 68 79 chr2 121408135 121408312 -129279542 + MER69A DNA AcHobo 2 176 -1 338 212 13 133 chr2 121408312 121408356 -129279498 + L3 LINE CR1 1293 1341 -236 2255 74 10 7 chr2 121408460 121408757 -129279097 - AluSg SINE Alu -12 298 1 477 243 158 25 chr2 121408780 121408982 -129278872 + MLT1L LTR MaLR 10 238 -377 460 271 63 78 chr2 121409033 121409317 -129278537 + MLT1L LTR MaLR 232 605 0 2206 115 0 0 chr2 121409607 121409902 -129277952 - AluSx SINE Alu -17 295 1 186 71 0 0 chr2 121410224 121410252 -129277602 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 801 144 0 16 chr2 121410252 121410372 -129277482 - AluSp/q SINE Alu -32 281 164 526 191 43 0 chr2 121410368 121410462 -129277392 - AluJb SINE Alu -196 116 19 * 2246 110 14 0 chr2 121410487 121410779 -129277075 - AluSx SINE Alu -16 296 1 262 162 242 30 chr2 121410804 121410903 -129276951 - L1MC5 LINE L1 -71 7890 7771 550 167 143 8 chr2 121410984 121411110 -129276744 + L1MB7 LINE L1 6041 6183 -1 437 264 29 7 chr2 121411158 121411298 -129276556 + MLT1H LTR MaLR 91 233 -316 934 225 136 45 chr2 121411565 121411830 -129276024 + L2 LINE L2 2726 2965 -348 2329 78 0 0 chr2 121411830 121412125 -129275729 - AluSc SINE Alu -14 295 1 934 225 136 45 chr2 121412125 121412406 -129275448 + L2 LINE L2 2965 3312 -1 292 269 194 21 chr2 121412409 121412595 -129275259 + L2 LINE L2 3024 3241 -72 311 313 96 66 chr2 121414278 121414769 -129273085 - L2 LINE L2 -14 3258 2776 2309 58 20 14 chr2 121414957 121415252 -129272602 + AluY SINE Alu 1 297 -14 685 189 27 0 chr2 121415254 121415365 -129272489 - AluJo/FLAM SINE Alu -197 115 2 920 198 158 43 chr2 121415572 121415850 -129272004 + AluSx SINE Alu 1 310 -2 236 309 85 49 chr2 121415853 121416063 -129271791 - L1ME LINE L1 -307 5814 5592 2122 112 7 7 chr2 121416063 121416367 -129271487 + AluSq SINE Alu 1 304 -9 236 309 85 49 chr2 121416367 121416402 -129271452 - L1ME LINE L1 -529 5592 5560 273 231 31 0 chr2 121416573 121416638 -129271216 - Alu SINE Alu -4 296 230 419 255 221 26 chr2 121416985 121417216 -129270638 - HAL1 LINE L1 -6 2501 2226 461 195 134 27 chr2 121417253 121417402 -129270452 - HAL1 LINE L1 -340 2167 2003 1122 96 6 0 chr2 121417723 121417879 -129269975 - AluY SINE Alu -22 289 133 2387 53 3 23 chr2 121417879 121418182 -129269672 - AluY SINE Alu -14 297 1 23 33 0 0 chr2 121418421 121418451 -129269403 + AT_rich Low_complexity Low_complexity 1 30 0 1775 175 10 7 chr2 121418553 121418861 -129268993 - AluJo SINE Alu -3 309 1 2227 96 14 0 chr2 121420973 121421266 -129266588 + AluSx SINE Alu 1 297 -15 2228 91 7 0 chr2 121421276 121421562 -129266292 + AluSg SINE Alu 1 288 -22 15810 83 12 18 chr2 121422101 121424373 -129263481 - L1PA7 LINE L1 -3 6151 3890 2339 77 3 13 chr2 121424373 121424672 -129263182 - AluY SINE Alu -15 296 1 15810 83 12 18 chr2 121424672 121425299 -129262555 - L1PA7 LINE L1 -2264 3890 3261 1306 91 0 16 chr2 121425299 121425476 -129262378 - L1P LINE L1 -3833 2313 2138 3856 192 61 36 chr2 121425557 121426104 -129261750 + L1MB8 LINE L1 4496 5028 -1150 836 89 0 16 chr2 121426104 121426227 -129261627 - L1MA4 LINE L1 -5 6295 6175 3856 192 61 36 chr2 121426227 121426265 -129261589 + L1MB8 LINE L1 5028 5064 -1114 1985 123 3 3 chr2 121426265 121426578 -129261276 - AluSx SINE Alu 0 313 1 3856 192 61 36 chr2 121426578 121427485 -129260369 + L1MB8 LINE L1 5064 6034 -144 812 176 0 23 chr2 121427485 121427616 -129260238 - FLAM_A SINE Alu -5 128 1 3856 192 61 36 chr2 121427616 121427757 -129260097 + L1MB8 LINE L1 6034 6170 -8 2347 67 13 29 chr2 121427757 121428073 -129259781 - AluSq SINE Alu -2 311 1 1483 205 56 10 chr2 121428162 121428450 -129259404 + AluJo SINE Alu 1 301 -1 210 129 0 0 chr2 121428877 121428908 -129258946 + L2 LINE L2 3261 3291 -22 1538 149 3 102 chr2 121429069 121429384 -129258470 - AluSx SINE Alu -7 305 22 2498 165 45 13 chr2 121429452 121429911 -129257943 + HUERS-P1 LTR ERV1 5543 6263 0 2212 155 34 101 chr2 121429911 121430465 -129257389 + LTR8 LTR ERV1 1 517 -174 2148 127 0 3 chr2 121430465 121430764 -129257090 - AluSx SINE Alu -14 298 1 22 35 0 0 chr2 121430766 121430795 -129257059 + AT_rich Low_complexity Low_complexity 1 29 0 2220 88 28 0 chr2 121430795 121431078 -129256776 - AluSq SINE Alu -22 291 1 1281 118 27 0 chr2 121431078 121431264 -129256590 + LTR8 LTR ERV1 501 691 0 742 158 0 47 chr2 121431762 121431889 -129255965 + FLAM_C SINE Alu 5 125 -18 224 231 0 19 chr2 121431918 121431970 -129255884 - L2 LINE L2 -302 2970 2920 2107 109 17 0 chr2 121432010 121432304 -129255550 + AluSq SINE Alu 1 299 -14 504 91 0 114 chr2 121433311 121433334 -129254520 + MADE1 DNA Mariner 3 27 -53 2355 95 3 3 chr2 121433334 121433639 -129254215 + AluSq SINE Alu 1 305 -8 504 91 0 114 chr2 121433639 121433703 -129254151 + MADE1 DNA Mariner 27 80 0 1757 168 10 10 chr2 121433723 121434014 -129253840 + AluJb SINE Alu 3 293 -19 1236 202 112 8 chr2 121434490 121434580 -129253274 + AluJb SINE Alu 2 81 -221 228 35 0 0 chr2 121434580 121434609 -129253245 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1236 202 112 8 chr2 121434609 121434776 -129253078 + AluJb SINE Alu 81 286 -16 189 382 0 22 chr2 121434958 121435047 -129252807 + L2 LINE L2 2931 3017 -296 829 158 0 8 chr2 121435181 121435308 -129252546 - FLAM_C SINE Alu -17 126 1 504 226 57 8 chr2 121435309 121435433 -129252421 + L2 LINE L2 3179 3308 -5 951 148 13 7 chr2 121435450 121435599 -129252255 + FAM SINE Alu 18 167 -18 4733 195 66 26 chr2 121436815 121437443 -129250411 + L1MB4 LINE L1 4060 4661 -1519 904 165 0 0 chr2 121437443 121437576 -129250278 + FLAM_C SINE Alu 1 133 0 4733 195 66 26 chr2 121437576 121438400 -129249454 + L1MB4 LINE L1 4661 5609 -571 1706 148 72 0 chr2 121438400 121438677 -129249177 + AluSx SINE Alu 1 297 -15 4733 195 66 26 chr2 121438677 121439059 -129248795 + L1MB4 LINE L1 5609 5974 -206 1273 183 17 31 chr2 121439060 121439350 -129248504 + L1MB4 LINE L1 5872 6157 -23 2448 89 3 0 chr2 121439453 121439757 -129248097 + AluSp SINE Alu 1 305 -8 24 32 0 0 chr2 121439977 121440008 -129247846 + AT_rich Low_complexity Low_complexity 1 31 0 353 283 20 56 chr2 121440222 121440420 -129247434 + HAL1b LINE L1 378 568 -780 1420 134 32 76 chr2 121440885 121441228 -129246626 - Charlie1 DNA MER1_type -52 2709 2382 365 286 0 0 chr2 121441233 121441303 -129246551 - Charlie1 DNA MER1_type -2690 71 2 340 256 37 92 chr2 121442163 121442327 -129245527 + MER5A DNA MER1_type 35 189 0 231 225 62 25 chr2 121442383 121442463 -129245391 + MIR3 SINE MIR 123 205 -3 477 0 0 0 chr2 121442904 121442957 -129244897 + (TG)n Simple_repeat Simple_repeat 2 54 0 271 243 14 14 chr2 121443093 121443167 -129244687 + L1ME LINE L1 5757 5830 -291 2110 118 0 55 chr2 121443167 121443497 -129244357 + AluSx SINE Alu 1 312 0 849 166 0 59 chr2 121443497 121443666 -129244188 + AluJo/FRAM SINE Alu 134 292 -20 1929 137 24 7 chr2 121443773 121444066 -129243788 + AluJo SINE Alu 1 298 -14 186 205 51 0 chr2 121444247 121444286 -129243568 + L2 LINE L2 3265 3305 -8 650 249 106 21 chr2 121445328 121445565 -129242289 - L1MC4 LINE L1 -146 7896 7640 41031 66 9 11 chr2 121445581 121451733 -129236121 - L1PA5 LINE L1 -5 6149 4 2120 136 0 0 chr2 121451740 121452035 -129235819 - AluSg SINE Alu -15 295 1 1609 211 112 16 chr2 121452035 121452894 -129234960 - L1MC4 LINE L1 -390 7652 6452 25 0 0 0 chr2 121452983 121453008 -129234846 + AT_rich Low_complexity Low_complexity 1 25 0 2256 135 146 179 chr2 121453264 121453696 -129234158 - L1MB7 LINE L1 -23 6157 5712 1177 161 40 5 chr2 121453696 121453895 -129233959 + AluJo SINE Alu 1 206 -106 2256 135 146 179 chr2 121453895 121454409 -129233445 - L1MB7 LINE L1 -468 5712 5035 983 101 14 0 chr2 121454409 121454547 -129233307 - AluSc SINE Alu -16 293 154 3976 184 55 123 chr2 121454550 121454766 -129233088 - L1MB7 LINE L1 -1144 5002 4773 2090 121 14 0 chr2 121454766 121455063 -129232791 - AluSp SINE Alu -12 301 1 3976 184 55 123 chr2 121455063 121455382 -129232472 - L1MB7 LINE L1 -1373 4773 4434 1055 73 0 0 chr2 121455382 121455518 -129232336 - AluY SINE Alu -4 307 172 3976 184 55 123 chr2 121455518 121456207 -129231647 - L1MB7 LINE L1 -1712 4434 3700 2046 140 3 0 chr2 121456207 121456500 -129231354 - AluSx SINE Alu -18 294 1 3976 184 55 123 chr2 121456500 121456797 -129231057 - L1MB7 LINE L1 -2446 3700 3455 1805 156 27 3 chr2 121456797 121457092 -129230762 - AluJb SINE Alu -10 302 1 236 218 50 69 chr2 121457106 121457207 -129230647 + MER94 DNA DNA 33 131 -3 1469 164 52 61 chr2 121458068 121458378 -129229476 - AluJb SINE Alu -5 307 1 368 294 16 0 chr2 121458538 121458664 -129229190 - Charlie8 DNA MER1_type -2187 230 103 3731 203 48 46 chr2 121458698 121459523 -129228331 + L1MD2 LINE L1 4472 5293 -1066 1497 140 86 7 chr2 121459523 121459802 -129228052 + AluJb SINE Alu 1 301 -11 3731 203 48 46 chr2 121459802 121460788 -129227066 + L1MD2 LINE L1 5293 6342 -17 2188 127 0 19 chr2 121460927 121461112 -129226742 - AluSx SINE Alu -3 309 131 2772 7 0 3 chr2 121461112 121461419 -129226435 - AluYa5 SINE Alu -5 306 1 2188 127 0 19 chr2 121461419 121461548 -129226306 - AluSx SINE Alu -181 131 1 316 254 127 0 chr2 121461947 121462073 -129225781 + L1M4 LINE L1 4076 4217 -1929 338 231 113 62 chr2 121462299 121462459 -129225395 - L1ME LINE L1 -380 5741 5574 2087 139 3 7 chr2 121462954 121463257 -129224597 + AluSx SINE Alu 1 302 -10 919 91 0 15 chr2 121463423 121463555 -129224299 + L1PA15 LINE L1 6032 6161 -4 2361 81 16 3 chr2 121463560 121463867 -129223987 + AluSq SINE Alu 1 311 -2 1249 206 35 43 chr2 121465028 121465310 -129222544 - AluJo SINE Alu -25 287 8 2359 79 3 13 chr2 121465409 121465714 -129222140 - AluSx SINE Alu -10 302 1 287 193 64 46 chr2 121466105 121466214 -129221640 - L1ME4a LINE L1 -18 6103 5993 300 306 189 21 chr2 121466324 121466615 -129221239 - L1ME4a LINE L1 -260 5861 5522 317 25 0 0 chr2 121466914 121466954 -129220900 - L1P3 LINE L1 -6418 43 4 2869 88 0 2 chr2 121467877 121468513 -129219341 + L1P3 LINE L1 1 713 -5748 2279 193 39 41 chr2 121468507 121468744 -129219110 + L1P LINE L1 2097 2333 -3813 * 2324 115 0 0 chr2 121468744 121469057 -129218797 + AluSp SINE Alu 1 313 0 2279 193 39 41 chr2 121469057 121469456 -129218398 + L1P LINE L1 2333 2732 -3414 807 178 27 5 chr2 121469558 121469743 -129218111 + L1PA7 LINE L1 509 697 -5764 19952 91 24 15 chr2 121469760 121469990 -129217864 + L1PA7 LINE L1 2419 2645 -3824 1722 192 0 0 chr2 121469990 121470303 -129217551 + AluSp SINE Alu 1 313 0 19952 91 24 15 chr2 121470303 121474087 -129213767 + L1PA7 LINE L1 2645 6469 0 434 169 32 106 chr2 121475479 121475668 -129212186 - L1MC5 LINE L1 -909 7052 6878 1773 153 4 4 chr2 121475998 121476272 -129211582 - AluSx SINE Alu -38 274 1 923 209 18 0 chr2 121476290 121476515 -129211339 + L1MA4 LINE L1 6062 6290 -10 1278 146 105 71 chr2 121477450 121477744 -129210110 - AluJo SINE Alu -8 304 1 198 0 0 0 chr2 121478703 121478725 -129209129 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1877 149 171 8 chr2 121478936 121479304 -129208550 - MSTA LTR MaLR 0 428 1 271 279 22 44 chr2 121479784 121479920 -129207934 - HAL1 LINE L1 -13 2494 2362 24 0 0 0 chr2 121479961 121479985 -129207869 + AT_rich Low_complexity Low_complexity 1 24 0 1276 219 45 52 chr2 121480313 121480760 -129207094 + LTR55 LTR ERV 42 485 -63 374 262 161 35 chr2 121480946 121481263 -129206591 - HAL1 LINE L1 -622 1885 1529 * 34681 56 6 6 chr2 121481253 121486772 -129201082 - L1PA5 LINE L1 0 6154 632 226 333 23 11 chr2 121486903 121486990 -129200864 - LTR16C LTR ERVL -310 181 94 249 224 86 0 chr2 121487014 121487072 -129200782 + MIR SINE MIR 164 226 -36 1807 102 49 19 chr2 121487081 121487345 -129200509 + AluSx SINE Alu 11 282 -30 1405 187 81 0 chr2 121487625 121487898 -129199956 + AluJo SINE Alu 1 295 -17 1452 196 0 26 chr2 121488661 121488932 -129198922 - AluJo SINE Alu -48 264 1 431 225 54 0 chr2 121489030 121489141 -129198713 + L1ME1 LINE L1 5826 5942 -224 2471 94 11 14 chr2 121489374 121489745 -129198109 + L1PA14 LINE L1 5789 6158 -3 899 248 57 31 chr2 121489770 121490174 -129197680 - L1ME LINE L1 -552 5618 5197 742 88 0 0 chr2 121490174 121490287 -129197567 - L1MA5 LINE L1 0 6300 6188 899 248 57 31 chr2 121490287 121490310 -129197544 - L1ME LINE L1 -973 5197 5176 188 67 33 0 chr2 121490687 121490717 -129197137 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 268 206 29 59 chr2 121490747 121490849 -129197005 - L1ME LINE L1 -345 5776 5678 601 214 54 42 chr2 121490880 121491048 -129196806 + MIR SINE MIR 2 171 -91 262 301 14 14 chr2 121491709 121491782 -129196072 - MIR3 SINE MIR -48 160 88 269 316 13 0 chr2 121491975 121492054 -129195800 + L3 LINE CR1 1495 1574 -3 1970 101 58 4 chr2 121493312 121493588 -129194266 + AluSc SINE Alu 1 291 -18 881 212 27 11 chr2 121493759 121493943 -129193911 + MER5A DNA MER1_type 3 189 0 2323 100 0 3 chr2 121494054 121494363 -129193491 - AluSx SINE Alu -3 309 2 2077 144 18 6 chr2 121494412 121494751 -129193103 - MER2 DNA MER2_type 0 344 2 22 35 0 0 chr2 121494825 121494854 -129193000 + AT_rich Low_complexity Low_complexity 1 29 0 738 97 0 146 chr2 121495575 121495719 -129192135 + FLAM_C SINE Alu 1 123 -20 2944 222 105 47 chr2 121496209 121496620 -129191234 - L1M4 LINE L1 -2297 4347 3962 1585 170 0 18 chr2 121496620 121496903 -129190951 - AluJo SINE Alu -34 278 1 2944 222 105 47 chr2 121496903 121497971 -129189883 - L1M4 LINE L1 -2682 3962 2781 830 190 46 9 chr2 121497964 121498180 -129189674 - L1M4 LINE L1 -4928 1614 1391 * 188 0 0 69 chr2 121498267 121498296 -129189558 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 2302 93 0 3 chr2 121498296 121498585 -129189269 - AluSx SINE Alu -24 288 1 198 306 83 14 chr2 121498654 121498726 -129189128 - MER5A DNA MER1_type -16 173 97 21 0 0 0 chr2 121498956 121498977 -129188877 + AT_rich Low_complexity Low_complexity 1 21 0 2205 128 0 0 chr2 121499123 121499429 -129188425 + AluSx SINE Alu 1 306 -6 208 0 30 30 chr2 121500772 121500805 -129187049 + (TG)n Simple_repeat Simple_repeat 2 34 0 1591 175 7 16 chr2 121500820 121501123 -129186731 - AluJo SINE Alu -7 305 6 185 182 55 91 chr2 121501236 121501291 -129186563 - MIR SINE MIR -167 95 43 448 232 72 61 chr2 121501413 121501853 -129186001 - HAL1b LINE L1 -708 640 137 2454 62 3 0 chr2 121502049 121502341 -129185513 - AluY SINE Alu -18 293 1 22 35 0 0 chr2 121502753 121502782 -129185072 + AT_rich Low_complexity Low_complexity 1 29 0 204 135 27 0 chr2 121503351 121503388 -129184466 - L3b LINE CR1 -250 1333 1296 26 0 0 0 chr2 121507367 121507393 -129180461 + AT_rich Low_complexity Low_complexity 1 26 0 2002 264 108 26 chr2 121511721 121512487 -129175367 + L2 LINE L2 1040 1868 -1446 291 281 140 9 chr2 121512489 121512603 -129175251 + MER91B DNA MER1_type 2 130 -60 813 273 113 45 chr2 121512711 121513154 -129174700 + L2 LINE L2 1862 2334 -980 1067 188 153 99 chr2 121513154 121513251 -129174603 - L1MD3 LINE L1 -1 7994 7904 2060 114 7 23 chr2 121513251 121513557 -129174297 - AluSx SINE Alu -11 301 1 1067 188 153 99 chr2 121513557 121513891 -129173963 - L1MD3 LINE L1 -91 7904 7540 213 325 24 63 chr2 121513891 121514017 -129173837 + L2 LINE L2 2321 2441 -873 679 175 26 0 chr2 121514021 121514135 -129173719 + MER5A DNA MER1_type 73 189 0 974 279 159 29 chr2 121514136 121514748 -129173106 + L2 LINE L2 2437 3126 -187 240 146 146 0 chr2 121514788 121514836 -129173018 + Tigger5 DNA MER2_type 1 55 -2268 293 183 33 33 chr2 121514857 121514917 -129172937 + Tigger5 DNA MER2_type 2264 2323 0 237 292 62 0 chr2 121514917 121514982 -129172872 + L2 LINE L2 3184 3252 -61 213 309 66 33 chr2 121514983 121515135 -129172719 - L2 LINE L2 -7 3306 3150 199 268 249 29 chr2 121515365 121515574 -129172280 - MIR SINE MIR 0 262 8 3245 165 114 4 chr2 121516165 121516873 -129170981 - L1MB7 LINE L1 -59 6361 5576 469 203 86 8 chr2 121516873 121517001 -129170853 + Tigger5 DNA MER2_type 1 138 -2185 * 1118 151 111 0 chr2 121516997 121517196 -129170658 + Tigger5 DNA MER2_type 2103 2323 0 475 176 32 16 chr2 121517202 121517327 -129170527 - L1MB7 LINE L1 -812 5570 5444 * 1479 217 84 19 chr2 121517302 121518019 -129169835 - L1MB7 LINE L1 -3380 3002 2218 2016 91 66 21 chr2 121518019 121518305 -129169549 - AluSg SINE Alu -11 299 1 1479 217 84 19 chr2 121518305 121518366 -129169488 - L1MB7 LINE L1 -4164 2218 2162 331 100 29 29 chr2 121518366 121518436 -129169418 + (TTATG)n Simple_repeat Simple_repeat 3 72 0 1923 152 0 7 chr2 121518436 121518726 -129169128 - AluSx SINE Alu -24 288 1 343 257 22 77 chr2 121518726 121518909 -129168945 - L1MB7 LINE L1 -4207 2177 2005 1690 153 14 35 chr2 121519144 121519432 -129168422 - AluJo SINE Alu -19 293 12 21 57 0 0 chr2 121519637 121519672 -129168182 + AT_rich Low_complexity Low_complexity 1 35 0 270 219 57 19 chr2 121519777 121519882 -129167972 - L1MD3 LINE L1 -1405 6590 6482 514 238 111 12 chr2 121519897 121520069 -129167785 - L1MC4a LINE L1 -1380 6497 6309 497 286 62 11 chr2 121520072 121520250 -129167604 - L1MC4a LINE L1 -2197 5680 5494 339 160 181 0 chr2 121520259 121520353 -129167501 - L1MA10 LINE L1 -11 6323 6213 275 223 91 74 chr2 121520373 121520548 -129167306 - L1MC4a LINE L1 -2376 5501 5324 315 222 0 86 chr2 121520862 121520943 -129166911 + L1 LINE L1 4900 4973 -1173 180 0 0 0 chr2 121520946 121520966 -129166888 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5994 79 22 55 chr2 121520966 121522245 -129165609 - L1PA11 LINE L1 -6 6168 4879 623 265 65 19 chr2 121522259 121522568 -129165286 - LTR37A LTR ERV1 -58 368 46 2165 114 0 10 chr2 121522767 121523066 -129164788 + AluSx SINE Alu 5 300 -12 1855 139 0 3 chr2 121523450 121523737 -129164117 + AluSq SINE Alu 1 286 -27 8550 50 19 1 chr2 121523828 121525682 -129162172 - L1PA6 LINE L1 -7 6147 4248 2127 131 0 3 chr2 121526264 121526576 -129161278 - AluJb SINE Alu -1 311 1 1087 231 128 45 chr2 121526987 121527516 -129160338 - L1MC4 LINE L1 0 8042 7470 792 281 75 15 chr2 121527524 121527922 -129159932 - L1MC4 LINE L1 -677 7365 6944 1818 171 78 3 chr2 121528402 121528746 -129159108 - MLT1C LTR MaLR 0 467 98 3049 203 87 24 chr2 121528801 121529751 -129158103 - L1MC4a LINE L1 -865 5350 4341 310 169 17 0 chr2 121529801 121529860 -129157994 - L1MC4a LINE L1 -6302 94 35 1281 157 0 0 chr2 121529947 121530151 -129157703 + MER2 DNA MER2_type 6 209 -136 24 32 0 0 chr2 121530156 121530187 -129157667 + AT_rich Low_complexity Low_complexity 1 31 0 315 0 0 0 chr2 121530875 121530910 -129156944 + (CA)n Simple_repeat Simple_repeat 2 36 0 1208 150 80 9 chr2 121531580 121531806 -129156048 + L1PA16 LINE L1 5912 6153 -13 1231 136 0 0 chr2 121531808 121531984 -129155870 + AluSg/x SINE Alu 137 312 0 252 370 122 21 chr2 121532244 121532482 -129155372 + L3 LINE CR1 1160 1421 -156 1873 98 4 4 chr2 121532482 121532736 -129155118 + AluSq SINE Alu 1 254 -59 413 287 82 0 chr2 121532840 121532962 -129154892 + L3 LINE CR1 1425 1556 -21 672 264 6 12 chr2 121533293 121533456 -129154398 - MER5B DNA MER1_type -3 175 14 202 191 24 0 chr2 121535797 121535839 -129152015 - MIR SINE MIR 0 262 220 13879 168 33 27 chr2 121535853 121541977 -129145877 + L1M1 LINE L1 13 6543 -1022 4037 112 27 32 chr2 121542078 121542516 -129145338 - L1P3 LINE L1 -3378 3083 2649 1981 169 0 0 chr2 121542516 121542829 -129145025 - AluSp SINE Alu 0 313 1 4037 112 27 32 chr2 121542829 121543066 -129144788 - L1P3 LINE L1 -3812 2649 2412 415 125 0 0 chr2 121543060 121543116 -129144738 - L1P3 LINE L1 -5748 713 658 * 1267 190 13 0 chr2 121543347 121543579 -129144275 + MER46A DNA MER2_type 2 236 0 313 355 48 0 chr2 121544138 121544262 -129143592 + L3 LINE CR1 681 810 -767 776 281 172 29 chr2 121544406 121544848 -129143006 + L3 LINE CR1 1071 1575 -2 180 0 0 0 chr2 121544918 121544938 -129142916 + (A)n Simple_repeat Simple_repeat 1 20 0 434 136 37 0 chr2 121544941 121545022 -129142832 - L1MB3 LINE L1 -13 6170 6087 717 244 78 6 chr2 121545406 121545586 -129142268 - MER58A DNA MER1_type -22 202 10 403 305 23 38 chr2 121547362 121547493 -129140361 - L2 LINE L2 -2 3311 3183 879 304 32 25 chr2 121547732 121548169 -129139685 + L1M4 LINE L1 4791 5230 -916 271 250 0 0 chr2 121548171 121548227 -129139627 + CT-rich Low_complexity Low_complexity 2 57 0 392 250 25 3 chr2 121548253 121548388 -129139466 + L1M1 LINE L1 6663 6796 -769 23 33 0 0 chr2 121548958 121548988 -129138866 + AT_rich Low_complexity Low_complexity 1 30 0 805 228 59 10 chr2 121548997 121549199 -129138655 + MIR SINE MIR 42 253 -9 1697 189 77 6 chr2 121549242 121549581 -129138273 + MLT1A1 LTR MaLR 1 363 -2 1869 213 92 19 chr2 121549629 121550196 -129137658 + L1MD3 LINE L1 3441 4048 -2098 916 276 149 7 chr2 121550198 121550626 -129137228 + L1MD3 LINE L1 5451 5939 -2056 2064 131 3 7 chr2 121550810 121551108 -129136746 + AluSx SINE Alu 2 298 -14 1633 173 7 11 chr2 121552212 121552490 -129135364 + AluJo SINE Alu 2 278 -34 2093 95 61 3 chr2 121552505 121552800 -129135054 + AluSx SINE Alu 1 312 0 327 299 64 13 chr2 121552998 121553155 -129134699 - L1M4 LINE L1 -1233 4913 4749 449 157 98 20 chr2 121553310 121553412 -129134442 - L1MB7 LINE L1 -24 6160 6051 3366 178 51 16 chr2 121553697 121554389 -129133465 - L1MB7 LINE L1 -151 6033 5318 3311 199 52 69 chr2 121554384 121555102 -129132752 - L1MB7 LINE L1 0 6184 5455 * 1882 158 7 13 chr2 121555102 121555405 -129132449 - AluJo SINE Alu -11 301 1 3311 199 52 69 chr2 121555405 121555523 -129132331 - L1MB7 LINE L1 -729 5455 5337 1610 177 9 64 chr2 121555523 121555850 -129132004 - AluJo SINE Alu -3 309 1 3311 199 52 69 chr2 121555850 121556247 -129131607 - L1MB7 LINE L1 -847 5337 4980 1826 94 87 18 chr2 121556249 121556544 -129131310 + AluY SINE Alu 1 311 0 404 158 53 0 chr2 121556545 121556621 -129131233 + L1 LINE L1 4261 4340 -1806 351 273 109 0 chr2 121557099 121557209 -129130645 + MIR3 SINE MIR 78 199 -9 238 170 0 43 chr2 121559486 121559533 -129128321 + MER58 DNA MER1_type 2375 2419 -1 1967 137 0 29 chr2 121563108 121563414 -129124440 - AluJb SINE Alu -15 297 1 1353 200 25 11 chr2 121563610 121563895 -129123959 + AluJo SINE Alu 2 290 -22 273 255 108 57 chr2 121563914 121564071 -129123783 - HAL1 LINE L1 -9 2498 2334 556 183 197 28 chr2 121564078 121564220 -129123634 + MER5A DNA MER1_type 4 169 -20 562 254 141 5 chr2 121564263 121564483 -129123371 - HAL1 LINE L1 -229 2278 2029 634 178 0 0 chr2 121564507 121564608 -129123246 - FLAM_A SINE Alu -7 135 35 3605 260 90 66 chr2 121564611 121566495 -129121359 - HAL1 LINE L1 -485 2022 94 221 98 78 78 chr2 121566525 121566576 -129121278 + MER5B DNA MER1_type 83 133 -45 682 256 17 6 chr2 121566582 121566758 -129121096 - L1ME3A LINE L1 -20 6150 5973 1982 251 75 23 chr2 121566807 121567364 -129120490 + MLT1E LTR MaLR 8 593 0 1075 237 183 3 chr2 121567364 121567697 -129120157 - L1ME3A LINE L1 -300 5870 5478 1275 139 26 5 chr2 121567799 121567993 -129119861 - AluJo SINE Alu -114 198 1 1407 204 14 11 chr2 121568413 121568692 -129119162 - AluJo SINE Alu -32 280 1 261 367 23 16 chr2 121568885 121569013 -129118841 + L2 LINE L2 3178 3306 -7 229 189 94 19 chr2 121569497 121569550 -129118304 - L2 LINE L2 -6 3307 3251 503 202 34 0 chr2 121569552 121569641 -129118213 + FLAM_C SINE Alu 14 105 -38 2373 133 12 18 chr2 121569684 121570023 -129117831 - MER1B DNA MER1_type 0 337 1 1869 158 10 3 chr2 121570273 121570570 -129117284 - AluJb SINE Alu -13 299 1 2136 158 25 5 chr2 121570891 121571259 -129116595 + L1M1 LINE L1 5377 5751 -549 285 264 124 0 chr2 121571311 121571440 -129116414 + L1M4b LINE L1 1508 1652 -5207 2447 139 30 25 chr2 121571440 121571836 -129116018 - L1PA13 LINE L1 -10 6804 6407 14060 168 11 11 chr2 121571836 121572222 -129115632 - L1PA13 LINE L1 -1229 5568 5183 2311 83 3 3 chr2 121572222 121572523 -129115331 - AluY SINE Alu -10 301 1 14060 168 11 11 chr2 121572523 121573868 -129113986 - L1PA13 LINE L1 -1614 5183 3834 1841 161 3 13 chr2 121573868 121574179 -129113675 - AluSx SINE Alu -4 308 1 14060 168 11 11 chr2 121574179 121574968 -129112886 - L1PA13 LINE L1 -2962 3835 3047 4370 204 79 0 chr2 121574969 121575843 -129112011 - L1PA13 LINE L1 -5695 1092 150 5457 216 94 51 chr2 121575865 121576725 -129111129 + L1M4b LINE L1 1653 2475 -4482 2490 64 0 0 chr2 121576725 121577021 -129110833 - AluY SINE Alu -15 296 1 5457 216 94 51 chr2 121577021 121577201 -129110653 + L1M4b LINE L1 2475 2646 -4311 2291 82 0 20 chr2 121577201 121577518 -129110336 + AluSp SINE Alu 1 311 0 5457 216 94 51 chr2 121577518 121579112 -129108742 + L1M4b LINE L1 2646 4545 -2412 470 200 0 12 chr2 121579112 121579197 -129108657 + AluJ/FLAM SINE Alu 1 84 -228 5457 216 94 51 chr2 121579197 121579747 -129108107 + L1M4b LINE L1 4545 5070 -1887 2343 114 0 0 chr2 121579749 121580055 -129107799 + AluSq SINE Alu 1 306 -7 571 84 0 0 chr2 121580057 121580128 -129107726 + Alu SINE Alu 2 72 -246 555 175 66 7 chr2 121580131 121580268 -129107586 - L1M4 LINE L1 -1676 4470 4326 2214 103 48 30 chr2 121630446 121630777 -129057077 + MER1B DNA MER1_type 1 337 0 272 224 15 0 chr2 121631153 121631220 -129056634 - AluSp SINE Alu -118 185 118 1021 191 0 6 chr2 121631270 121631443 -129056411 - AluJo SINE Alu -136 176 5 505 210 19 44 chr2 121631445 121631737 -129056117 - L1M4 LINE L1 -2863 3283 3041 581 172 0 0 chr2 121631737 121631836 -129056018 - FLAM_A SINE Alu 0 142 44 1509 243 35 15 chr2 121631840 121632383 -129055471 - L1M4 LINE L1 -3110 3036 2483 1773 143 56 0 chr2 121632511 121632798 -129055056 - AluJb SINE Alu -8 304 2 325 363 92 17 chr2 121633763 121634003 -129053851 - MIR SINE MIR 0 262 5 441 286 87 69 chr2 121634437 121634713 -129053141 + L2 LINE L2 2992 3272 0 34 24 0 0 chr2 121636102 121636143 -129051711 + GC_rich Low_complexity Low_complexity 1 41 0 202 305 19 67 chr2 121636967 121637072 -129050782 - MIR SINE MIR -77 131 32 554 301 0 13 chr2 121637149 121637302 -129050552 + MIR3 SINE MIR 21 171 -37 296 234 104 0 chr2 121637914 121637991 -129049863 + MIR SINE MIR 121 205 -57 933 103 0 29 chr2 121639380 121639516 -129048338 + FLAM_C SINE Alu 1 132 -11 680 307 141 29 chr2 121640516 121640962 -129046892 - MLT1E3 LTR MaLR -23 601 106 436 117 0 0 chr2 121641118 121641178 -129046676 + AluSp/q SINE Alu 233 292 -21 280 301 59 43 chr2 121642057 121642243 -129045611 - L2 LINE L2 -227 3045 2857 984 84 15 0 chr2 121643146 121643277 -129044577 + AluSq/x SINE Alu 5 137 -176 252 354 117 36 chr2 121643398 121643621 -129044233 + L2 LINE L2 2985 3225 -47 198 0 0 0 chr2 121645125 121645147 -129042707 + (A)n Simple_repeat Simple_repeat 1 22 0 265 299 142 22 chr2 121646779 121646913 -129040941 - MLT1L LTR MaLR -44 571 422 250 206 41 0 chr2 121647247 121647320 -129040534 + L1ME4a LINE L1 5724 5799 -322 1619 161 15 4 chr2 121647320 121647593 -129040261 - AluJo SINE Alu -10 302 27 832 149 54 40 chr2 121647596 121647744 -129040110 - AluJo SINE Alu -162 150 1 235 214 0 0 chr2 121647970 121648040 -129039814 + L1ME4a LINE L1 6046 6115 -6 431 221 10 19 chr2 121648664 121648768 -129039086 - MIR3 SINE MIR -45 163 61 427 262 19 0 chr2 121648781 121648888 -129038966 - L2 LINE L2 -11 3261 3153 343 207 9 60 chr2 121649642 121649758 -129038096 + L1PA16 LINE L1 5949 6058 -108 211 267 56 0 chr2 121650057 121650147 -129037707 - L2 LINE L2 -256 3016 2922 208 196 0 59 chr2 121652458 121652509 -129035345 - L2 LINE L2 0 3272 3225 * 382 314 101 32 chr2 121652486 121652674 -129035180 - MIR SINE MIR -33 229 29 29 47 0 0 chr2 121653077 121653120 -129034734 + GC_rich Low_complexity Low_complexity 1 43 0 264 77 0 0 chr2 121654060 121654099 -129033755 + (TG)n Simple_repeat Simple_repeat 1 39 0 234 91 0 0 chr2 121655208 121655241 -129032613 + (A)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr2 121655642 121655663 -129032191 + (A)n Simple_repeat Simple_repeat 1 21 0 253 83 67 17 chr2 121657538 121657598 -129030256 + AluSp/q SINE Alu 241 303 0 295 318 110 7 chr2 121658926 121659080 -129028774 - MIR SINE MIR -73 189 20 193 0 94 0 chr2 121659827 121659859 -129027995 + T-rich Low_complexity Low_complexity 2 36 0 1609 175 6 32 chr2 121660019 121660333 -129027521 - AluJo SINE Alu -6 306 1 738 258 52 14 chr2 121660525 121660910 -129026944 - MLT1J2 LTR MaLR 0 450 2 207 162 0 0 chr2 121661415 121661452 -129026402 + (CCCG)n Simple_repeat Simple_repeat 4 40 0 224 253 71 50 chr2 121662764 121662863 -129024991 - MIR SINE MIR -113 149 49 192 230 106 53 chr2 121662966 121663079 -129024775 - MIR3 SINE MIR -22 186 68 378 321 36 30 chr2 121665234 121665402 -129022452 + MIR SINE MIR 61 229 -33 1491 63 5 0 chr2 121666952 121667141 -129020713 + AluSq SINE Alu 1 190 -123 880 212 88 0 chr2 121667478 121667671 -129020183 + MER58A DNA MER1_type 12 221 -3 335 130 0 54 chr2 121668713 121668805 -129019049 + (T)n Simple_repeat Simple_repeat 1 87 0 192 40 0 0 chr2 121668813 121668838 -129019016 + (G)n Simple_repeat Simple_repeat 1 25 0 29 0 0 100 chr2 121668848 121668908 -129018946 + AT_rich Low_complexity Low_complexity 1 54 0 565 276 79 72 chr2 121670289 121670398 -129017456 + L2 LINE L2 2574 2681 -632 1397 186 6 61 chr2 121670398 121670710 -129017144 - AluSx SINE Alu -17 295 1 565 276 79 72 chr2 121670710 121670773 -129017081 + L2 LINE L2 2681 2742 -571 2197 97 7 7 chr2 121670773 121671073 -129016781 - AluSg SINE Alu -10 300 1 2672 133 28 21 chr2 121671073 121671495 -129016359 - MSTB LTR MaLR -1 425 1 565 276 79 72 chr2 121671495 121671828 -129016026 + L2 LINE L2 2741 3070 -243 1319 263 70 16 chr2 121671914 121672302 -129015552 - MLT1I LTR MaLR 0 409 1 288 367 127 7 chr2 121673628 121673778 -129014076 - L3b LINE CR1 -10 1573 1406 2430 132 3 21 chr2 121674618 121675005 -129012849 + MLT1B LTR MaLR 11 390 0 352 223 149 0 chr2 121675082 121675176 -129012678 + MIR SINE MIR 93 200 -62 261 279 133 49 chr2 121676860 121677086 -129010768 + L2 LINE L2 1731 1975 -1339 489 258 0 0 chr2 121677786 121677883 -129009971 + MER81 DNA DNA 1 97 -17 2255 85 0 0 chr2 121678130 121678425 -129009429 + AluSx SINE Alu 1 295 -17 476 326 128 26 chr2 121678867 121679039 -129008815 - L2 LINE L2 -3 3310 3157 2311 72 3 0 chr2 121679039 121679332 -129008522 - AluY SINE Alu -17 294 1 476 326 128 26 chr2 121679332 121679598 -129008256 - L2 LINE L2 -156 3157 2794 700 256 109 78 chr2 121679634 121680056 -129007798 - MLT1J LTR MaLR -51 460 26 1497 106 0 0 chr2 121680060 121680268 -129007586 + AluSg/x SINE Alu 103 310 0 1126 301 127 2 chr2 121680326 121680948 -129006906 - L2 LINE L2 -570 2744 2045 1600 115 0 0 chr2 121681155 121681373 -129006481 - AluSx SINE Alu -94 218 1 235 150 25 0 chr2 121681374 121681414 -129006440 - L1M3 LINE L1 -683 5488 5448 340 243 72 86 chr2 121682177 121682218 -129005636 + MIR SINE MIR 30 70 -192 1997 115 3 46 chr2 121682218 121682541 -129005313 + AluJb SINE Alu 2 310 -2 340 243 72 86 chr2 121682541 121682651 -129005203 + MIR SINE MIR 70 179 -83 215 303 92 0 chr2 121683338 121683414 -129004440 - L2 LINE L2 -7 3306 3224 284 272 167 9 chr2 121684353 121684467 -129003387 - MIR SINE MIR -14 248 117 264 354 61 37 chr2 121684571 121684735 -129003119 - MIR SINE MIR -16 246 79 2697 16 7 0 chr2 121684766 121685075 -129002779 - AluYa5 SINE Alu 0 311 1 191 333 60 30 chr2 121685373 121685541 -129002313 + L2 LINE L2 2898 3070 -202 255 364 68 0 chr2 121685629 121685747 -129002107 + L2 LINE L2 3116 3241 -31 419 304 34 20 chr2 121688207 121688355 -128999499 - MLT1J LTR MaLR -4 507 358 2184 110 7 0 chr2 121688817 121689126 -128998728 + AluSx SINE Alu 1 311 -1 1824 85 24 0 chr2 121690530 121690797 -128997057 + AluSc SINE Alu 41 309 0 22 35 0 0 chr2 121691196 121691225 -128996629 + GC_rich Low_complexity Low_complexity 1 29 0 2196 95 6 19 chr2 121693655 121693971 -128993883 - AluSp SINE Alu 0 313 2 351 319 67 0 chr2 121694484 121694603 -128993251 - L2 LINE L2 0 3272 3146 897 132 7 0 chr2 121695614 121695750 -128992104 + AluJb SINE Alu 1 137 -175 2206 100 0 7 chr2 121695762 121696061 -128991793 - AluSg1 SINE Alu -12 297 1 2159 114 0 16 chr2 121696447 121696762 -128991092 - AluSq SINE Alu -1 312 3 316 285 12 0 chr2 121700085 121700197 -128987657 - MIR SINE MIR -64 144 69 262 195 0 0 chr2 121702077 121702118 -128985736 + Charlie1 DNA MER1_type 14 54 -2707 1359 217 67 3 chr2 121702140 121702486 -128985368 + Charlie1 DNA MER1_type 2394 2761 0 1318 71 0 36 chr2 121703946 121704142 -128983712 + AluY SINE Alu 1 189 -122 257 86 0 0 chr2 121706011 121706046 -128981808 - ERVL LTR ERVL -694 5070 5036 2446 82 0 3 chr2 121707900 121708205 -128979649 - AluY SINE Alu -7 304 1 603 218 0 0 chr2 121709975 121710122 -128977732 + (TG)n Simple_repeat Simple_repeat 2 148 0 198 306 83 28 chr2 121710729 121710837 -128977017 - MIR3 SINE MIR -46 162 49 225 178 0 0 chr2 121710885 121710930 -128976924 + CT-rich Low_complexity Low_complexity 2 46 0 231 157 0 0 chr2 121711347 121711398 -128976456 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 913 255 50 17 chr2 121711788 121712027 -128975827 + MIR SINE MIR 8 254 -8 220 288 0 0 chr2 121712037 121712096 -128975758 + (CAT)n Simple_repeat Simple_repeat 1 59 0 4536 198 51 15 chr2 121712479 121713588 -128974266 - L1MB7 LINE L1 -19 6165 4946 2067 118 45 0 chr2 121713588 121713877 -128973977 - AluY SINE Alu -9 302 1 4536 198 51 15 chr2 121713877 121714736 -128973118 - L1MB7 LINE L1 -1238 4946 4119 22 0 0 0 chr2 121715730 121715752 -128972102 + AT_rich Low_complexity Low_complexity 1 22 0 330 213 130 28 chr2 121716288 121716396 -128971458 - MIR3 SINE MIR -11 197 79 555 250 64 6 chr2 121716670 121716826 -128971028 + MIR SINE MIR 34 198 -64 * 623 278 58 40 chr2 121716822 121717045 -128970809 - MIR SINE MIR 0 262 36 691 184 30 15 chr2 121717564 121717803 -128970051 + MER58 DNA MER1_type 60 2420 0 2368 67 0 0 chr2 121718129 121718434 -128969420 + AluY SINE Alu 1 305 0 3822 161 17 27 chr2 121718442 121719189 -128968665 + L1MB3 LINE L1 5442 6181 -2 407 279 22 37 chr2 121720266 121720402 -128967452 - L2 LINE L2 -213 3059 2926 382 202 61 9 chr2 121720675 121720789 -128967065 - L1ME4a LINE L1 -20 6101 5982 333 188 12 14 chr2 121720928 121721009 -128966845 - L1ME4a LINE L1 -361 5760 5689 381 201 236 7 chr2 121721095 121721239 -128966615 - MER5A DNA MER1_type -4 185 9 256 292 14 0 chr2 121721665 121721737 -128966117 + MIR SINE MIR 115 187 -75 754 259 186 35 chr2 121721906 121722494 -128965360 - L2 LINE L2 -5 3267 2597 2142 101 14 0 chr2 121723243 121723557 -128964297 + AluSx SINE Alu 1 318 0 319 170 0 0 chr2 121724025 121724078 -128963776 - MIR SINE MIR -55 153 101 1679 133 34 77 chr2 121724078 121724123 -128963731 + AluJo SINE Alu 1 46 -266 2099 102 7 36 chr2 121724123 121724427 -128963427 - AluSx SINE Alu -17 295 1 1679 133 34 77 chr2 121724427 121724704 -128963150 + AluJo SINE Alu 46 309 -3 2433 71 7 0 chr2 121724907 121725201 -128962653 + AluSp SINE Alu 1 296 -17 1564 217 139 65 chr2 121725623 121725927 -128961927 + MLT1E LTR MaLR 1 281 -312 2087 99 41 7 chr2 121725927 121726220 -128961634 - AluSx SINE Alu -9 303 1 1564 217 139 65 chr2 121726220 121726467 -128961387 + MLT1E LTR MaLR 281 593 0 2035 127 10 3 chr2 121726833 121727155 -128960699 + AluSq SINE Alu 1 313 0 3518 168 58 5 chr2 121727156 121727812 -128960042 + L1MB3 LINE L1 5491 6181 -2 2121 77 0 77 chr2 121727820 121728131 -128959723 + AluY SINE Alu 1 287 -24 31 44 0 0 chr2 121728134 121728179 -128959675 + AT_rich Low_complexity Low_complexity 1 45 0 842 111 0 76 chr2 121728181 121728325 -128959529 + FLAM_C SINE Alu 1 133 0 257 294 119 28 chr2 121729260 121729437 -128958417 + MIR SINE MIR 3 195 -67 1876 151 7 3 chr2 121729839 121730137 -128957717 - AluJb SINE Alu -12 300 2 182 237 0 0 chr2 121730544 121730582 -128957272 - L2 LINE L2 -12 3260 3223 1315 172 178 92 chr2 121731167 121731537 -128956317 - MLT1F LTR MaLR 0 542 117 2324 94 61 19 chr2 121731537 121731897 -128955957 + THE1C LTR MaLR 1 375 0 1315 172 178 92 chr2 121731897 121732025 -128955829 - MLT1F LTR MaLR -425 117 1 322 188 38 38 chr2 121732591 121732671 -128955183 + L3 LINE CR1 1495 1574 -3 508 358 78 35 chr2 121733096 121733518 -128954336 + L2 LINE L2 2499 2938 -376 353 327 166 0 chr2 121733741 121733964 -128953890 - L2 LINE L2 -631 2683 2424 2819 117 164 145 chr2 121733972 121734832 -128953022 - pTR5 LTR ERV1 0 2438 26 193 263 303 10 chr2 121735007 121735106 -128952748 + MIR SINE MIR 22 149 -113 206 308 145 34 chr2 121735235 121735352 -128952502 + L2 LINE L2 3114 3243 -29 196 67 67 0 chr2 121735640 121735670 -128952184 - MIR SINE MIR -62 146 115 231 286 39 39 chr2 121735868 121735945 -128951909 - L2 LINE L2 -4 3309 3233 307 235 92 34 chr2 121736070 121736189 -128951665 - L1ME4a LINE L1 -24 6097 5972 246 256 110 0 chr2 121736253 121736335 -128951519 + HsTC2 DNA Tc2 11 101 -1797 340 279 95 68 chr2 121736352 121736646 -128951208 - L1MEd LINE L1 -5488 631 330 304 284 0 0 chr2 121736682 121736756 -128951098 + HsTC2 DNA Tc2 1823 1896 -2 1209 224 132 0 chr2 121736993 121737297 -128950557 + Tigger7 DNA MER2_type 1 344 -389 955 141 0 7 chr2 121737292 121737441 -128950413 + Tigger7 DNA MER2_type 2439 2586 -1 * 2180 123 13 3 chr2 121737483 121737792 -128950062 - AluSx SINE Alu 0 312 1 22 0 0 0 chr2 121738114 121738136 -128949718 + AT_rich Low_complexity Low_complexity 1 22 0 324 273 127 34 chr2 121738632 121738837 -128949017 + L2 LINE L2 2715 2938 -376 652 244 154 15 chr2 121739253 121739454 -128948400 + MIR SINE MIR 14 242 -20 364 217 62 137 chr2 121739650 121739819 -128948035 + MER5B DNA MER1_type 19 164 -14 2128 121 4 0 chr2 121740532 121740832 -128947022 + AluSx SINE Alu 1 301 0 227 154 26 0 chr2 121741299 121741338 -128946516 + L2 LINE L2 3255 3294 -19 195 246 87 29 chr2 121741354 121741423 -128946431 + MIR SINE MIR 12 84 -178 507 165 21 10 chr2 121741545 121741642 -128946212 + MLT1A2 LTR MaLR 277 374 0 2494 54 0 13 chr2 121741670 121741968 -128945886 - AluY SINE Alu -17 294 1 7073 61 4 7 chr2 121742238 121743355 -128944499 + L1PA7 LINE L1 5040 6154 0 227 154 26 0 chr2 121743906 121743945 -128943909 - L2 LINE L2 -19 3294 3255 1113 104 45 0 chr2 121746868 121747022 -128940832 - AluSg/x SINE Alu -8 304 144 2436 49 0 11 chr2 121747953 121748277 -128939577 - AluY SINE Alu 0 321 1 1845 176 3 3 chr2 121749243 121749544 -128938310 + AluJo SINE Alu 1 301 -11 553 260 116 109 chr2 121750133 121751184 -128936670 + HAL1 LINE L1 706 1763 -744 291 259 54 61 chr2 121751660 121751807 -128936047 + HAL1b LINE L1 745 890 -458 427 287 112 43 chr2 121751924 121752182 -128935672 + HAL1 LINE L1 2224 2499 -8 2309 109 3 0 chr2 121752192 121752494 -128935360 + AluSq SINE Alu 1 303 -10 2285 78 0 27 chr2 121752498 121752793 -128935061 + AluY SINE Alu 1 287 -24 668 273 172 55 chr2 121753183 121753601 -128934253 + L2 LINE L2 2843 3309 -4 2194 88 48 7 chr2 121753856 121754151 -128933703 - AluSq SINE Alu -6 307 1 783 130 23 30 chr2 121756377 121756508 -128931346 - FLAM_C SINE Alu -3 130 1 209 170 21 21 chr2 121756717 121756764 -128931090 - MIR SINE MIR -70 192 146 26 0 0 0 chr2 121757792 121757818 -128930036 + AT_rich Low_complexity Low_complexity 1 26 0 4193 204 34 14 chr2 121958437 121959651 -128728203 - L1 LINE L1 -2986 4579 3344 482 300 63 4 chr2 121959967 121960015 -128727839 + L1ME3 LINE L1 5710 5754 -408 200 35 35 0 chr2 121960015 121960044 -128727810 + (GAATG)n Simple_repeat Simple_repeat 4 33 0 482 300 63 4 chr2 121960044 121960232 -128727622 + L1ME3 LINE L1 5754 5960 -202 574 189 35 0 chr2 121962057 121962226 -128725628 + (TCCA)n Simple_repeat Simple_repeat 3 177 0 238 269 154 51 chr2 121962818 121962993 -128724861 - MLT1H LTR MaLR -345 204 12 2658 57 0 0 chr2 121963806 121964107 -128723747 - AluY SINE Alu -10 301 1 1072 236 94 44 chr2 121964112 121964548 -128723306 - L1MC5 LINE L1 -543 7418 6961 298 271 86 21 chr2 121964969 121965109 -128722745 + L2 LINE L2 2920 3068 -204 709 304 49 41 chr2 121966609 121966665 -128721189 + L1MC/D LINE L1 5255 5309 -2499 1814 211 42 38 chr2 121966665 121967168 -128720686 - MLT1D LTR MaLR 0 505 1 709 304 49 41 chr2 121967168 121967499 -128720355 + L1MC/D LINE L1 5309 5645 -2163 273 300 7 43 chr2 121967551 121967691 -128720163 - L2 LINE L2 -56 3257 3123 1785 216 60 9 chr2 121967697 121968132 -128719722 - MLT1C LTR MaLR -10 457 1 512 310 37 31 chr2 121968157 121968484 -128719370 - L2 LINE L2 -223 3090 2759 1939 133 7 0 chr2 121969091 121969376 -128718478 + AluSq SINE Alu 18 304 -9 2252 103 17 0 chr2 121969425 121969716 -128718138 + AluSg SINE Alu 5 300 -10 1752 269 67 10 chr2 121969719 121970317 -128717537 + L1MC4 LINE L1 7283 7914 -128 414 231 19 0 chr2 121970372 121970476 -128717378 + L1MEc LINE L1 1623 1728 -4668 1046 158 16 33 chr2 121970484 121970667 -128717187 - AluJo SINE Alu -130 182 3 2728 256 62 2 chr2 121970671 121971710 -128716144 + L1MEc LINE L1 2306 3406 -2809 1924 173 13 0 chr2 121971764 121972071 -128715783 + AluJb SINE Alu 1 311 -1 1803 211 45 73 chr2 121972101 121972396 -128715458 - L1M4 LINE L1 -993 5153 4851 1863 163 17 0 chr2 121972396 121972696 -128715158 + AluJo SINE Alu 1 305 -7 1803 211 45 73 chr2 121972696 121972806 -128715048 - L1M4 LINE L1 -1295 4851 4739 2368 101 0 19 chr2 121972806 121973122 -128714732 - AluSg SINE Alu 0 310 1 1803 211 45 73 chr2 121973122 121973321 -128714533 - L1M4 LINE L1 -1407 4739 4565 1799 209 147 5 chr2 121974074 121974515 -128713339 + MLT1D LTR MaLR 1 504 -1 1057 221 170 72 chr2 121974549 121975091 -128712763 + MLT1G1 LTR MaLR 1 595 0 1437 243 99 85 chr2 121975101 121975937 -128711917 + HAL1 LINE L1 733 1580 -927 1915 207 123 8 chr2 121975940 121976419 -128711435 - MLT1F LTR MaLR -3 539 6 1581 254 100 23 chr2 121976426 121977025 -128710829 + HAL1 LINE L1 1576 2220 -287 328 259 83 17 chr2 121977380 121977530 -128710324 - MIR SINE MIR -76 186 24 198 367 58 0 chr2 121978653 121978792 -128709062 + L2 LINE L2 3102 3248 -24 522 314 35 6 chr2 121978876 121979048 -128708806 + MIR3 SINE MIR 20 196 -12 583 88 67 12 chr2 121979110 121979357 -128708497 + (TAGA)n Simple_repeat Simple_repeat 1 260 0 730 181 62 43 chr2 121979357 121979802 -128708052 - MLT2F LTR ERVL -41 622 36 762 198 37 12 chr2 121980127 121980289 -128707565 - MIR SINE MIR -70 192 27 1222 224 65 92 chr2 121980509 121980974 -128706880 + MLT1J LTR MaLR 1 452 -59 527 226 168 0 chr2 121980985 121981140 -128706714 + MER5A DNA MER1_type 9 189 0 706 159 27 24 chr2 121982261 121982428 -128705426 + MIR SINE MIR 67 236 -26 232 337 23 0 chr2 121985448 121985534 -128702320 + MIR SINE MIR 98 185 -77 336 351 20 13 chr2 121985667 121985818 -128702036 + MIR SINE MIR 14 165 -97 235 297 89 0 chr2 121985929 121986030 -128701824 + L2 LINE L2 2446 2555 -759 1691 297 85 29 chr2 121986716 121987444 -128700410 + ERVL LTR ERVL 1890 2658 -3106 1250 330 69 16 chr2 121987598 121988259 -128699595 + ERVL LTR ERVL 2826 3482 -2003 684 249 111 0 chr2 121988287 121988476 -128699378 + MER63A DNA MER1_type 1 210 0 387 219 77 119 chr2 121988476 121988787 -128699067 - MER97c DNA MER1_type? -26 1064 767 736 228 52 1 chr2 121988935 121989148 -128698706 + MER58B DNA MER1_type 110 339 -2 2994 201 69 66 chr2 121989157 121989518 -128698336 - Zaphod DNA AcHobo -3051 980 622 2403 95 7 0 chr2 121989518 121989823 -128698031 - AluSc SINE Alu -2 307 1 2994 201 69 66 chr2 121989823 121990361 -128697493 - Zaphod DNA AcHobo -3409 622 87 2387 92 3 3 chr2 121990361 121990665 -128697189 + AluSp SINE Alu 1 304 -9 303 28 0 0 chr2 121990666 121990702 -128697152 + (TG)n Simple_repeat Simple_repeat 2 37 0 2994 201 69 66 chr2 121990702 121990771 -128697083 - Zaphod DNA AcHobo -3943 88 6 339 282 0 0 chr2 121991393 121991478 -128696376 + MIR SINE MIR 59 143 -119 282 306 177 34 chr2 121991510 121991657 -128696197 - MER91A DNA MER1_type -7 189 22 254 164 91 0 chr2 121992706 121992761 -128695093 - LTR16A LTR ERVL 0 450 391 391 251 114 18 chr2 121992770 121992937 -128694917 - LTR16A LTR ERVL -239 211 29 192 77 0 0 chr2 121994472 121994498 -128693356 + (TGGGGG)n Simple_repeat Simple_repeat 3 28 0 256 288 0 0 chr2 121995172 121995238 -128692616 - MIR SINE MIR -73 135 70 198 274 66 104 chr2 121995383 121995642 -128692212 - L2 LINE L2 -90 3182 2934 200 162 54 0 chr2 121996315 121996352 -128691502 + GA-rich Low_complexity Low_complexity 3 41 0 279 269 135 50 chr2 121997386 121997527 -128690327 + MIR SINE MIR 50 202 -60 1320 235 127 21 chr2 121998496 121998930 -128688924 + MLT1L LTR MaLR 131 610 -5 298 295 71 9 chr2 122000534 122000646 -128687208 + MIR SINE MIR 78 196 -66 234 216 27 14 chr2 122001505 122001579 -128686275 + MIR SINE MIR 38 112 -96 326 314 0 0 chr2 122002179 122002265 -128685589 + C-rich Low_complexity Low_complexity 2 87 0 318 26 0 0 chr2 122002310 122002349 -128685505 + (TG)n Simple_repeat Simple_repeat 1 39 0 294 29 0 0 chr2 122002966 122003001 -128684853 + (CA)n Simple_repeat Simple_repeat 1 35 0 194 325 161 21 chr2 122003145 122003356 -128684498 + L2 LINE L2 2932 3112 -201 2018 155 56 27 chr2 122003356 122003586 -128684268 - MSTB LTR MaLR -2 424 175 2459 76 10 0 chr2 122003586 122003889 -128683965 - AluY SINE Alu -5 306 1 2018 155 56 27 chr2 122003889 122004070 -128683784 - MSTB LTR MaLR -251 175 1 189 0 0 0 chr2 122004072 122004093 -128683761 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 194 325 161 21 chr2 122004093 122004213 -128683641 + L2 LINE L2 3112 3313 0 362 328 24 60 chr2 122004308 122004493 -128683361 + L1ME LINE L1 4982 5172 -992 1939 164 0 13 chr2 122004493 122004792 -128683062 + AluSx SINE Alu 1 295 -17 2123 99 3 3 chr2 122004802 122005084 -128682770 + AluSp SINE Alu 31 312 -1 362 328 24 60 chr2 122005084 122005548 -128682306 + L1ME LINE L1 5181 5642 -522 459 263 86 27 chr2 122007423 122007571 -128680283 - MIR SINE MIR -62 146 37 294 253 40 0 chr2 122007682 122007757 -128680097 + MIR SINE MIR 110 187 -75 933 271 49 14 chr2 122008768 122009052 -128678802 - MLT1J LTR MaLR -195 316 23 450 266 150 12 chr2 122009936 122010109 -128677745 - MLT1J LTR MaLR -202 309 113 180 0 0 0 chr2 122013004 122013024 -128674830 + (CGGGG)n Simple_repeat Simple_repeat 5 24 0 429 299 0 19 chr2 122013074 122013228 -128674626 - Charlie8 DNA MER1_type -2156 261 111 511 313 7 0 chr2 122013493 122013640 -128674214 - MIR SINE MIR -46 216 69 198 286 55 11 chr2 122013661 122013752 -128674102 - MIR SINE MIR -69 139 45 2258 100 0 3 chr2 122014865 122015176 -128672678 + AluSg SINE Alu 1 310 0 661 256 30 28 chr2 122015767 122015951 -128671903 - MLT1J LTR MaLR -297 165 6 265 294 105 58 chr2 122015958 122016350 -128671504 - L2 LINE L2 -73 3199 2788 373 366 24 0 chr2 122016617 122016781 -128671073 - MIR3 SINE MIR -6 202 35 256 208 13 65 chr2 122017505 122017582 -128670272 - L2 LINE L2 0 3313 3241 421 266 206 37 chr2 122017726 122017940 -128669914 - MLT1J LTR MaLR -36 475 226 526 189 110 31 chr2 122017940 122017981 -128669873 + L1ME LINE L1 5662 5698 -466 2411 181 64 5 chr2 122017981 122018417 -128669437 - LTR40b LTR ERVL 0 462 1 526 189 110 31 chr2 122018417 122018502 -128669352 + L1ME LINE L1 5698 5798 -366 996 120 71 6 chr2 122018514 122018697 -128669157 - L1M3 LINE L1 -711 5472 5278 184 348 99 37 chr2 122018697 122018970 -128668884 - L2 LINE L2 -574 2740 2451 181 274 16 16 chr2 122019492 122019554 -128668300 + MER5B DNA MER1_type 41 102 -76 287 197 15 0 chr2 122019699 122019765 -128668089 + L2 LINE L2 2995 3061 -252 354 242 74 0 chr2 122020052 122020147 -128667707 + MIR SINE MIR 103 204 -58 27 29 0 0 chr2 122020385 122020419 -128667435 + GC_rich Low_complexity Low_complexity 1 34 0 24 32 0 0 chr2 122020632 122020663 -128667191 + GC_rich Low_complexity Low_complexity 1 31 0 481 295 115 35 chr2 122021582 122021905 -128665949 - L2 LINE L2 -266 3047 2702 441 0 0 0 chr2 122021989 122022038 -128665816 + (CA)n Simple_repeat Simple_repeat 2 50 0 453 253 96 6 chr2 122022305 122022483 -128665371 - Charlie8 DNA MER1_type -2189 228 35 1711 142 80 75 chr2 122022526 122022900 -128664954 + MSTB1 LTR MaLR 24 399 -33 1247 92 0 0 chr2 122022900 122023063 -128664791 - AluSc SINE Alu -18 291 129 2157 105 0 13 chr2 122023063 122023377 -128664477 - AluSg SINE Alu 0 310 1 232 103 26 0 chr2 122023377 122023416 -128664438 + MSTB1 LTR MaLR 393 432 0 621 300 90 27 chr2 122023586 122024391 -128663463 - L1M4 LINE L1 -1091 5055 4164 2596 246 135 20 chr2 122024577 122025570 -128662284 + HAL1 LINE L1 1401 2507 0 715 276 80 5 chr2 122025632 122025863 -128661991 + MIR SINE MIR 13 261 -1 275 301 105 7 chr2 122026007 122026150 -128661704 + MIR SINE MIR 102 258 -4 533 294 47 60 chr2 122026299 122026663 -128661191 - MLT1I LTR MaLR -2 407 49 282 277 43 21 chr2 122028220 122028314 -128659540 - MIR SINE MIR -64 198 103 243 253 133 0 chr2 122029840 122029923 -128657931 - MIR SINE MIR -123 139 46 234 333 52 13 chr2 122030061 122030214 -128657640 - L1M LINE L1 -2390 5418 5260 213 234 142 69 chr2 122031398 122031595 -128656259 + MIR SINE MIR 33 259 -3 197 291 55 18 chr2 122032148 122032203 -128655651 + L2 LINE L2 3187 3243 -29 665 214 126 19 chr2 122032316 122032475 -128655379 - MER45A DNA AcHobo -1 177 2 660 221 22 0 chr2 122032764 122032900 -128654954 - AluJb SINE Alu -3 309 171 856 307 120 14 chr2 122032904 122033413 -128654441 - L2 LINE L2 -21 3292 2751 186 282 0 0 chr2 122033695 122033734 -128654120 + MIR SINE MIR 221 259 -3 312 341 93 0 chr2 122033960 122034089 -128653765 - MIR SINE MIR -78 184 44 543 302 74 21 chr2 122034159 122034401 -128653453 + MIR SINE MIR 8 262 0 407 236 57 8 chr2 122034509 122034632 -128653222 + MLT1G1 LTR MaLR 1 129 -466 322 283 348 13 chr2 122034659 122034889 -128652965 + MLT1G1 LTR MaLR 151 457 -98 185 358 25 0 chr2 122035607 122035688 -128652166 - L2 LINE L2 -3 3269 3187 543 276 53 0 chr2 122035700 122035870 -128651984 - MER63A DNA MER1_type -2 208 30 351 328 37 0 chr2 122036209 122036343 -128651511 - MIR3 SINE MIR -32 176 38 208 311 68 10 chr2 122036835 122036938 -128650916 - L2 LINE L2 -6 3266 3158 549 212 35 0 chr2 122037120 122037233 -128650621 - MER3 DNA MER1_type -14 195 79 181 231 130 28 chr2 122038665 122038773 -128649081 + MIR3 SINE MIR 5 123 -85 441 179 51 17 chr2 122038832 122038949 -128648905 - LTR33 LTR ERVL 0 521 401 253 235 168 0 chr2 122039093 122039212 -128648642 - LTR33 LTR ERVL -363 158 20 351 289 208 10 chr2 122039955 122040152 -128647702 + MIR SINE MIR 12 247 -15 213 375 0 11 chr2 122040571 122040659 -128647195 + MER5A DNA MER1_type 76 162 -27 368 339 8 0 chr2 122040798 122040916 -128646938 + MIR SINE MIR 31 149 -113 314 277 84 25 chr2 122043828 122043947 -128643907 + MER5A DNA MER1_type 62 187 -2 274 206 15 0 chr2 122044210 122044278 -128643576 - L1MA10 LINE L1 -6 6328 6260 2101 107 0 16 chr2 122044978 122045296 -128642558 - AluSq SINE Alu 0 313 1 254 319 9 18 chr2 122045341 122045454 -128642400 + (TG)n Simple_repeat Simple_repeat 1 112 0 369 266 62 0 chr2 122045769 122045882 -128641972 - MIR SINE MIR -39 223 104 191 281 24 24 chr2 122047008 122047090 -128640764 + MIR SINE MIR 36 117 -91 298 330 115 40 chr2 122047302 122047623 -128640231 - LTR16A LTR ERVL -4 446 102 199 260 135 0 chr2 122047706 122047802 -128640052 + MIR SINE MIR 67 175 -87 2149 152 10 70 chr2 122048095 122048510 -128639344 + MLT1B LTR MaLR 1 390 0 351 321 9 9 chr2 122048526 122048632 -128639222 - MLT1L LTR MaLR 0 615 510 333 244 23 0 chr2 122048761 122048847 -128639007 - L2 LINE L2 -237 3076 2989 513 193 0 0 chr2 122048850 122048933 -128638921 + AluJ/FLAM SINE Alu 2 84 -228 216 0 0 0 chr2 122049395 122049419 -128638435 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 523 324 125 25 chr2 122049419 122049456 -128638398 - L2 LINE L2 -13 3300 3268 2160 98 0 26 chr2 122049456 122049761 -128638093 - AluSx SINE Alu -14 298 2 523 324 125 25 chr2 122049761 122050385 -128637469 - L2 LINE L2 -45 3268 2578 1086 198 24 0 chr2 122050387 122050594 -128637260 - MER20 DNA MER1_type -3 216 5 226 346 77 31 chr2 122050762 122050892 -128636962 + MIR3 SINE MIR 6 141 -67 331 230 207 15 chr2 122050940 122051075 -128636779 - MER117 DNA MER1_type -36 161 1 1059 225 36 8 chr2 122051670 122051919 -128635935 + MLT1C LTR MaLR 86 341 -126 240 179 51 13 chr2 122051920 122051998 -128635856 + (TAA)n Simple_repeat Simple_repeat 3 83 0 560 238 0 16 chr2 122052025 122052151 -128635703 + MLT1C LTR MaLR 344 467 0 345 209 0 0 chr2 122052343 122052410 -128635444 + MLT1F LTR MaLR 1 67 -475 528 198 93 31 chr2 122052470 122052632 -128635222 - MER96B DNA MER1_type? -238 179 8 * 1574 211 117 21 chr2 122052625 122053061 -128634793 + MLT1F LTR MaLR 65 542 0 314 323 32 32 chr2 122053075 122053199 -128634655 + L2 LINE L2 2955 3078 -194 488 314 83 48 chr2 122053202 122053514 -128634340 + L2 LINE L2 2864 3186 -86 1226 154 90 112 chr2 122053984 122054296 -128633558 - AluJo SINE Alu -7 305 1 307 282 153 0 chr2 122054323 122054454 -128633400 + L2 LINE L2 3122 3272 0 188 88 59 0 chr2 122054834 122054868 -128632986 + (CACTT)n Simple_repeat Simple_repeat 5 40 0 265 281 42 21 chr2 122055401 122055497 -128632357 + MIR SINE MIR 51 148 -60 220 311 36 21 chr2 122056623 122056789 -128631065 - MIR SINE MIR -63 145 15 492 284 95 6 chr2 122056904 122057073 -128630781 - MIR SINE MIR -56 206 23 266 222 18 64 chr2 122057812 122057911 -128629943 + MIR3 SINE MIR 65 161 -47 262 344 16 0 chr2 122058059 122058181 -128629673 + L2 LINE L2 2683 2806 -508 1972 144 0 7 chr2 122058501 122058799 -128629055 + AluJo SINE Alu 3 298 -14 2156 114 13 0 chr2 122059575 122059881 -128627973 - AluSx SINE Alu 0 312 3 183 42 0 0 chr2 122060482 122060506 -128627348 + (TC)n Simple_repeat Simple_repeat 1 24 0 302 271 77 77 chr2 122060709 122060879 -128626975 - MIR SINE MIR -57 205 36 2209 108 3 0 chr2 122062564 122062869 -128624985 - AluSg SINE Alu -4 306 1 182 340 42 21 chr2 122063409 122063553 -128624301 + L2 LINE L2 2865 3011 -261 5397 197 21 17 chr2 122063554 122064590 -128623264 + MER45B DNA AcHobo 1 1040 0 182 360 27 0 chr2 122065163 122065238 -128622616 - MIR3 SINE MIR -49 159 83 547 356 75 42 chr2 122065269 122065763 -128622091 + MLT1K LTR MaLR 79 588 0 218 200 200 0 chr2 122065764 122065839 -128622015 - MIR SINE MIR -92 116 27 329 248 116 0 chr2 122067186 122067307 -128620547 + MIR SINE MIR 89 223 -39 361 240 66 41 chr2 122067677 122067798 -128620056 + MIR SINE MIR 6 129 -133 238 303 29 17 chr2 122068289 122068414 -128619440 - MIR SINE MIR -68 140 11 385 311 31 37 chr2 122069192 122069353 -128618501 + LTR16C LTR ERVL 298 457 -34 300 250 14 14 chr2 122069632 122069704 -128618150 - L1MC4 LINE L1 0 8042 7971 304 272 175 41 chr2 122069795 122070063 -128617791 + MLT1L LTR MaLR 149 452 -163 657 299 109 30 chr2 122070195 122070626 -128617228 - L1ME LINE L1 -303 5818 5354 1796 168 50 31 chr2 122071256 122071614 -128616240 - MLT1A1 LTR MaLR 0 365 1 223 299 75 9 chr2 122071720 122071827 -128616027 + MIR SINE MIR 20 133 -129 253 426 40 5 chr2 122072277 122072500 -128615354 - MIR SINE MIR -12 250 20 256 284 37 0 chr2 122074002 122074083 -128613771 - MIR3 SINE MIR -20 188 105 273 186 85 0 chr2 122075001 122075060 -128612794 - L1MC3 LINE L1 -16 7769 7706 365 260 118 0 chr2 122075254 122075381 -128612473 - MIR SINE MIR -17 245 104 261 386 47 0 chr2 122076006 122076133 -128611721 + MIR SINE MIR 12 144 -118 4875 171 28 1 chr2 122076402 122077398 -128610456 - L1MB3 LINE L1 -2 6181 5148 499 301 145 37 chr2 122077530 122078225 -128609629 + L1MEd LINE L1 249 1018 -5101 215 289 0 7 chr2 122078328 122078463 -128609391 + (TG)n Simple_repeat Simple_repeat 1 134 0 455 252 34 0 chr2 122079216 122079335 -128608519 + MIR SINE MIR 81 203 -59 350 308 108 49 chr2 122079518 122080088 -128607766 + L2 LINE L2 2646 3292 -21 234 234 32 53 chr2 122082507 122082601 -128605253 + MLT1E1 LTR MaLR 8 99 -555 466 319 32 16 chr2 122083143 122083331 -128604523 + MIR SINE MIR 16 206 -56 1547 239 63 14 chr2 122083936 122084379 -128603475 - MLT1C LTR MaLR -2 465 1 669 225 69 6 chr2 122084451 122084611 -128603243 - MIR SINE MIR -24 238 69 241 261 91 0 chr2 122085021 122085109 -128602745 - MIR SINE MIR -79 129 34 198 0 0 0 chr2 122085125 122085147 -128602707 + (CCCCAG)n Simple_repeat Simple_repeat 2 23 0 227 159 68 0 chr2 122085909 122085953 -128601901 - L2 LINE L2 0 3272 3226 204 125 0 0 chr2 122086014 122086046 -128601808 + (TCCA)n Simple_repeat Simple_repeat 4 35 0 598 225 8 8 chr2 122086913 122087042 -128600812 + MIR SINE MIR 21 149 -113 229 230 81 0 chr2 122087053 122087127 -128600727 + MLT1I LTR MaLR 7 86 -323 409 283 71 0 chr2 122087331 122087444 -128600410 + MLT1I LTR MaLR 288 408 -1 648 220 21 0 chr2 122087454 122087595 -128600259 + MLT1A2 LTR MaLR 1 144 -230 979 168 0 6 chr2 122087614 122087775 -128600079 - FRAM SINE Alu -17 159 1 636 230 42 12 chr2 122087785 122087992 -128599862 + MLT1B LTR MaLR 155 379 -7 184 304 63 25 chr2 122088000 122088079 -128599775 + MIR SINE MIR 157 238 -24 305 279 111 49 chr2 122088341 122088567 -128599287 - L2 LINE L2 -85 3187 2948 210 321 112 30 chr2 122088760 122088894 -128598960 - MIR SINE MIR -70 192 48 408 307 54 30 chr2 122089202 122089368 -128598486 + MIR SINE MIR 55 224 -38 289 350 38 50 chr2 122089515 122089675 -128598179 + MIR3 SINE MIR 30 187 -21 213 211 0 0 chr2 122089826 122089883 -128597971 + (TG)n Simple_repeat Simple_repeat 2 58 0 217 402 0 0 chr2 122090498 122090595 -128597259 + L3 LINE CR1 48 144 -1433 226 289 188 8 chr2 122090671 122090799 -128597055 + MIR SINE MIR 2 152 -110 519 365 8 25 chr2 122091135 122091376 -128596478 + L3 LINE CR1 474 710 -867 441 290 54 29 chr2 122091406 122091569 -128596285 - MIR SINE MIR -54 208 49 242 309 10 93 chr2 122091679 122091873 -128595981 - L2 LINE L2 -2 3311 3134 619 245 41 7 chr2 122091886 122092033 -128595821 - MIR SINE MIR -27 235 84 458 192 24 70 chr2 122092164 122092741 -128595113 + GA-rich Low_complexity Low_complexity 1 550 0 386 229 10 83 chr2 122092761 122092953 -128594901 + GA-rich Low_complexity Low_complexity 3 180 0 247 250 8 48 chr2 122093026 122093150 -128594704 + GA-rich Low_complexity Low_complexity 5 123 0 315 259 245 0 chr2 122093524 122093663 -128594191 + L3 LINE CR1 1306 1478 -99 338 330 80 36 chr2 122093681 122093957 -128593897 - L2 LINE L2 -7 3265 2978 252 0 0 0 chr2 122094193 122094221 -128593633 + (A)n Simple_repeat Simple_repeat 1 28 0 517 252 14 14 chr2 122094434 122094573 -128593281 + L1MD3 LINE L1 7844 7982 -13 1873 120 46 3 chr2 122094859 122095018 -128592836 - AluSx SINE Alu -16 296 118 495 0 0 0 chr2 122095018 122095073 -128592781 + (TG)n Simple_repeat Simple_repeat 2 56 0 1873 120 46 3 chr2 122095073 122095197 -128592657 - AluSx SINE Alu -194 118 1 192 200 0 0 chr2 122096065 122096105 -128591749 + T-rich Low_complexity Low_complexity 1 40 0 189 231 0 39 chr2 122096977 122097029 -128590825 - MIR SINE MIR -167 95 46 238 336 39 0 chr2 122097327 122097455 -128590399 + MIR SINE MIR 21 153 -55 324 310 18 9 chr2 122097915 122098028 -128589826 + MIR3 SINE MIR 10 123 -85 237 264 42 0 chr2 122098262 122098334 -128589520 - MIR3 SINE MIR -15 193 119 186 43 0 0 chr2 122099201 122099224 -128588630 + (TAA)n Simple_repeat Simple_repeat 2 24 0 423 254 17 18 chr2 122099305 122099441 -128588413 - MIR SINE MIR -70 138 4 2106 105 0 0 chr2 122099784 122100070 -128587784 + AluSx SINE Alu 21 306 -6 2231 245 37 6 chr2 122100081 122100702 -128587152 + L1M4 LINE L1 4547 5186 -960 319 297 40 10 chr2 122100838 122100939 -128586915 + MIR SINE MIR 88 191 -71 317 319 100 62 chr2 122102271 122102796 -128585058 + L2 LINE L2 2725 3272 0 431 136 0 0 chr2 122103201 122103267 -128584587 - L1PA16 LINE L1 -9 6157 6092 232 331 66 16 chr2 122103499 122103620 -128584234 + MIR SINE MIR 128 254 -8 290 298 191 22 chr2 122104818 122105137 -128582717 - L2 LINE L2 -349 2965 2593 492 281 41 14 chr2 122105405 122105551 -128582303 + MIR SINE MIR 20 169 -93 967 203 14 39 chr2 122105683 122105913 -128581941 + AluJo SINE Alu 84 308 0 374 331 38 33 chr2 122106022 122106206 -128581648 + MIR3 SINE MIR 2 186 -22 240 35 0 0 chr2 122106459 122106488 -128581366 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2212 76 0 10 chr2 122106490 122106778 -128581076 - AluSc SINE Alu -24 285 1 550 287 120 23 chr2 122106783 122107083 -128580771 - MER113 DNA MER1_type? -108 413 85 428 200 0 0 chr2 122107086 122107161 -128580693 + MER116 DNA Mariner 6 80 0 227 200 120 27 chr2 122107178 122107253 -128580601 - MIR SINE MIR 0 262 181 215 278 0 0 chr2 122107308 122107362 -128580492 + MIR SINE MIR 79 132 -76 195 243 71 29 chr2 122108618 122108688 -128579166 + MIR SINE MIR 117 189 -73 1305 241 85 31 chr2 122109668 122110146 -128577708 + L1MC4a LINE L1 7310 7994 0 360 325 17 0 chr2 122110147 122110267 -128577587 + MIR SINE MIR 141 262 0 189 339 0 0 chr2 122110369 122110431 -128577423 - L2 LINE L2 -18 3295 3234 188 343 67 0 chr2 122111351 122111456 -128576398 + MIR SINE MIR 118 229 -33 321 340 10 0 chr2 122111656 122111759 -128576095 - MIR SINE MIR -27 235 132 2205 153 63 20 chr2 122111937 122112382 -128575472 + MLT1C LTR MaLR 4 467 0 207 0 0 0 chr2 122112493 122112516 -128575338 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2393 61 0 0 chr2 122112518 122112796 -128575058 - AluSc SINE Alu -30 279 2 1216 234 143 31 chr2 122113081 122113458 -128574396 + L1MC5 LINE L1 6479 6812 -1149 1962 161 0 3 chr2 122113458 122113762 -128574092 + AluJo SINE Alu 9 311 -1 1216 234 143 31 chr2 122113762 122113810 -128574044 + L1MC5 LINE L1 6812 6853 -1108 1929 119 0 110 chr2 122113810 122114186 -128573668 + AluSx SINE Alu 1 339 0 1216 234 143 31 chr2 122114186 122114401 -128573453 + L1MC5 LINE L1 6853 7197 -764 22 56 0 0 chr2 122114407 122114443 -128573411 + AT_rich Low_complexity Low_complexity 1 36 0 845 288 78 73 chr2 122114475 122115044 -128572810 + L1MC5 LINE L1 7272 7711 -250 7129 42 0 0 chr2 122115044 122116156 -128571698 - L1PA5 LINE L1 -3 6151 5041 845 288 78 73 chr2 122116156 122116359 -128571495 + L1MC5 LINE L1 7711 7912 -49 1932 94 4 8 chr2 122117135 122117389 -128570465 - AluSg SINE Alu -14 296 44 701 175 29 0 chr2 122117421 122117558 -128570296 - L1ME LINE L1 -712 5454 5314 * 1925 228 23 25 chr2 122117556 122118086 -128569768 - L1ME LINE L1 -2060 4086 3558 321 260 82 20 chr2 122118111 122118257 -128569597 + MER113 DNA MER1_type? 31 185 -336 873 284 91 23 chr2 122118715 122119145 -128568709 + LTR33 LTR ERVL 45 503 -18 209 81 0 27 chr2 122121571 122121608 -128566246 + (CA)n Simple_repeat Simple_repeat 1 36 0 185 242 273 0 chr2 122122535 122122634 -128565220 + MIR3 SINE MIR 11 136 -72 331 188 275 29 chr2 122123021 122123159 -128564695 + MIR SINE MIR 20 191 -71 323 333 56 39 chr2 122124640 122124820 -128563034 - MIR SINE MIR -57 205 23 287 323 52 0 chr2 122125833 122125929 -128561925 + L3 LINE CR1 1420 1520 -57 197 256 0 0 chr2 122126369 122126412 -128561442 + L2 LINE L2 3270 3312 -1 181 268 89 0 chr2 122126781 122126837 -128561017 - L2 LINE L2 -13 3300 3240 453 199 0 0 chr2 122126921 122127082 -128560772 + (CA)n Simple_repeat Simple_repeat 1 161 0 482 202 6 0 chr2 122127150 122127328 -128560526 + (CA)n Simple_repeat Simple_repeat 1 179 0 2261 104 0 29 chr2 122128165 122128473 -128559381 - AluSq SINE Alu -14 299 1 2204 107 3 19 chr2 122128476 122128785 -128559069 - AluSx SINE Alu -8 304 1 2243 104 0 23 chr2 122128962 122129270 -128558584 - AluSx SINE Alu -11 301 1 1987 93 8 0 chr2 122129448 122129706 -128558148 - AluSg SINE Alu -14 296 37 196 309 202 6 chr2 122129937 122130115 -128557739 - L2 LINE L2 -338 2976 2764 261 306 116 0 chr2 122130241 122130388 -128557466 - L2 LINE L2 -558 2756 2593 215 229 0 0 chr2 122130604 122130652 -128557202 + MIR SINE MIR 81 128 -80 279 338 79 22 chr2 122130851 122130990 -128556864 + L1MC/D LINE L1 5603 5749 -2059 559 230 58 0 chr2 122131977 122132116 -128555738 + MIR SINE MIR 46 192 -70 336 244 118 8 chr2 122132589 122132708 -128555146 + MIR SINE MIR 46 177 -85 2280 107 7 10 chr2 122132909 122133219 -128554635 + AluSc SINE Alu 1 309 0 269 256 0 3 chr2 122134492 122134568 -128553286 + MIR SINE MIR 88 146 -62 397 238 86 56 chr2 122135612 122135849 -128552005 - MLT1J2 LTR MaLR -111 298 56 750 196 64 47 chr2 122135865 122136171 -128551683 - MLT1D LTR MaLR -92 413 34 1363 210 57 35 chr2 122136171 122136537 -128551317 + MLT1A2 LTR MaLR 1 374 0 750 196 64 47 chr2 122136537 122136572 -128551282 - MLT1D LTR MaLR -471 34 1 277 283 145 30 chr2 122137025 122137191 -128550663 - MIR SINE MIR -21 241 57 439 287 70 0 chr2 122137232 122137375 -128550479 + MIR3 SINE MIR 41 193 -15 198 291 0 0 chr2 122137681 122137736 -128550118 + L2 LINE L2 70 124 -3190 192 77 0 0 chr2 122137750 122137776 -128550078 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 275 196 0 0 chr2 122137809 122137860 -128549994 - L2 LINE L2 -36 3236 3186 225 0 0 0 chr2 122138500 122138525 -128549329 + (T)n Simple_repeat Simple_repeat 1 25 0 347 317 82 49 chr2 122138717 122138960 -128548894 - L1ME LINE L1 -427 5694 5444 226 366 104 0 chr2 122139298 122139462 -128548392 + MIR SINE MIR 81 261 -1 294 242 0 0 chr2 122139771 122139837 -128548017 + MLT1J LTR MaLR 111 176 -335 352 301 127 13 chr2 122139868 122140097 -128547757 + MLT1L LTR MaLR 360 614 -1 2084 114 0 4 chr2 122140597 122140869 -128546985 - AluSx SINE Alu -13 299 29 397 288 34 0 chr2 122140928 122141046 -128546808 - MIR SINE MIR -71 191 70 353 287 47 16 chr2 122141289 122141418 -128546436 - MIR SINE MIR -82 180 48 181 250 77 0 chr2 122142194 122142246 -128545608 - MIR3 SINE MIR -27 181 126 284 267 153 30 chr2 122142507 122142638 -128545216 + MIR3 SINE MIR 33 179 -29 200 294 0 0 chr2 122142870 122142921 -128544933 + MIR SINE MIR 67 117 -145 358 287 104 30 chr2 122143584 122143748 -128544106 + MIR SINE MIR 80 255 -7 351 237 111 74 chr2 122143880 122144073 -128543781 - MIR SINE MIR -62 146 5 180 0 0 0 chr2 122144793 122144813 -128543041 + (CACCC)n Simple_repeat Simple_repeat 4 23 0 344 299 75 8 chr2 122145158 122145292 -128542562 + MIR SINE MIR 120 262 0 807 305 25 21 chr2 122145563 122145799 -128542055 + L3 LINE CR1 1309 1545 -32 230 246 0 49 chr2 122145978 122146039 -128541815 + MIR SINE MIR 111 168 -94 484 318 50 5 chr2 122146752 122146953 -128540901 + MIR SINE MIR 10 219 -43 894 181 35 6 chr2 122147565 122147736 -128540118 + L1MDa LINE L1 123 298 -6242 930 165 6 35 chr2 122147737 122147907 -128539947 + MSTA LTR MaLR 1 165 -263 2070 97 3 33 chr2 122148007 122148306 -128539548 + AluY SINE Alu 22 311 0 1404 214 70 3 chr2 122148315 122148705 -128539149 - L1MC4 LINE L1 -1012 7030 6513 2294 119 0 0 chr2 122148745 122149047 -128538807 + AluSx SINE Alu 1 302 -10 826 290 69 33 chr2 122149348 122150076 -128537778 - L1MEc LINE L1 -4756 2366 1613 1433 206 69 34 chr2 122150077 122150138 -128537716 - LTR52 LTR ERVL -17 404 347 333 47 0 0 chr2 122150138 122150181 -128537673 + (CA)n Simple_repeat Simple_repeat 1 43 0 1433 206 69 34 chr2 122150181 122150498 -128537356 - LTR52 LTR ERVL -74 347 13 566 158 0 0 chr2 122150499 122150594 -128537260 + HY3 scRNA scRNA 4 98 -3 512 173 0 31 chr2 122150620 122150747 -128537107 + GA-rich Low_complexity Low_complexity 2 124 0 1580 214 19 27 chr2 122150808 122151182 -128536672 + MLT1A2 LTR MaLR 4 374 0 249 138 190 17 chr2 122151206 122151243 -128536611 - LTR52 LTR ERVL -41 380 351 273 57 0 0 chr2 122151243 122151278 -128536576 + (CA)n Simple_repeat Simple_repeat 1 35 0 249 138 190 17 chr2 122151278 122151298 -128536556 - LTR52 LTR ERVL -70 351 313 341 251 52 88 chr2 122151300 122151551 -128536303 - L1MEc LINE L1 -5016 1407 1166 189 213 149 0 chr2 122152826 122152873 -128534981 + MIR SINE MIR 154 207 -55 410 329 21 0 chr2 122153380 122153520 -128534334 + MIR SINE MIR 54 196 -66 376 252 168 0 chr2 122154542 122154673 -128533181 + L2 LINE L2 3160 3312 -1 297 284 35 0 chr2 122155057 122155156 -128532698 - MIR SINE MIR -64 144 79 281 317 185 19 chr2 122155346 122155611 -128532243 - L2 LINE L2 0 3313 3005 1059 219 108 118 chr2 122157256 122157800 -128530054 + MLT1H1 LTR MaLR 4 555 0 1583 196 0 40 chr2 122159469 122159765 -128528089 + AluJb SINE Alu 6 289 -23 249 279 70 41 chr2 122159894 122160011 -128527843 - MIR SINE MIR -86 122 3 566 265 65 0 chr2 122161054 122161254 -128526600 + LTR33 LTR ERVL 1 213 -308 193 233 22 0 chr2 122161639 122161729 -128526125 + (CA)n Simple_repeat Simple_repeat 2 93 0 2529 99 0 0 chr2 122162623 122162936 -128524918 - AluSq SINE Alu 0 313 1 190 330 54 36 chr2 122162994 122163106 -128524748 - MIR SINE MIR -67 141 28 444 308 115 24 chr2 122163621 122164115 -128523739 + L1MEc LINE L1 782 1320 -5076 348 64 0 0 chr2 122164516 122164563 -128523291 + (CA)n Simple_repeat Simple_repeat 2 48 0 281 217 0 0 chr2 122164592 122164652 -128523202 + MLT1K LTR MaLR 529 588 0 360 283 80 66 chr2 122164666 122164892 -128522962 - L1ME LINE L1 -543 5578 5350 268 309 74 19 chr2 122165714 122165876 -128521978 - HAL1b LINE L1 -786 562 392 409 302 75 51 chr2 122165981 122166348 -128521506 - L1MEd LINE L1 -2851 3278 841 822 271 55 81 chr2 122166373 122166675 -128521179 - MLT1K LTR MaLR -5 583 294 2409 82 3 28 chr2 122166675 122166994 -128520860 - AluY SINE Alu 0 311 1 822 271 55 81 chr2 122166994 122167126 -128520728 - MLT1K LTR MaLR -294 294 160 456 290 47 12 chr2 122167411 122167580 -128520274 - MLT1K LTR MaLR -410 178 4 422 274 0 24 chr2 122168037 122168161 -128519693 + MIR SINE MIR 33 153 -109 218 261 0 0 chr2 122169475 122169521 -128518333 + MIR SINE MIR 108 153 -109 491 239 22 0 chr2 122169661 122169795 -128518059 - MIR SINE MIR -65 197 61 227 154 0 19 chr2 122171053 122171105 -128516749 + GA-rich Low_complexity Low_complexity 1 51 0 1766 65 5 5 chr2 122171198 122171412 -128516442 + AluSp SINE Alu 1 214 -99 704 151 16 0 chr2 122171521 122171647 -128516207 - FLAM_C SINE Alu -5 128 1 1574 184 44 0 chr2 122171648 122171964 -128515890 - L1MB3 LINE L1 -45 6138 5809 691 258 195 3 chr2 122172968 122173255 -128514599 + MER63 DNA MER1_type 721 1062 0 492 318 25 21 chr2 122175057 122175296 -128512558 + L1MC5 LINE L1 7278 7517 -444 3419 240 88 84 chr2 122175301 122176016 -128511838 + L1MC4a LINE L1 5846 6556 -1252 396 0 0 0 chr2 122176016 122176060 -128511794 + (TG)n Simple_repeat Simple_repeat 2 45 0 3419 240 88 84 chr2 122176060 122177298 -128510556 + L1MC4a LINE L1 6556 7808 0 428 280 40 53 chr2 122177462 122177687 -128510167 + L1MC5 LINE L1 7710 7931 -30 907 166 0 14 chr2 122177693 122177838 -128510016 + FLAM_C SINE Alu 1 143 0 522 83 0 0 chr2 122179484 122179556 -128508298 + (TG)n Simple_repeat Simple_repeat 2 73 0 449 259 17 0 chr2 122179632 122179748 -128508106 + MIR SINE MIR 47 164 -98 1616 199 10 0 chr2 122179750 122180046 -128507808 + AluJo SINE Alu 1 299 -13 578 281 85 31 chr2 122181361 122181421 -128506433 + MER46C DNA MER2_type 3 58 -280 2353 118 0 0 chr2 122181421 122181734 -128506120 - AluSq SINE Alu 0 313 1 578 281 85 31 chr2 122181734 122181990 -128505864 + MER46C DNA MER2_type 58 336 -2 407 309 69 0 chr2 122182350 122182525 -128505329 - Charlie4 DNA MER1_type -3 1958 1772 1626 181 77 13 chr2 122182813 122183184 -128504670 - MLT1E1 LTR MaLR -263 370 4 242 36 0 0 chr2 122183466 122183494 -128504360 + (A)n Simple_repeat Simple_repeat 1 28 0 219 229 0 16 chr2 122184500 122184561 -128503293 + (CCCCAG)n Simple_repeat Simple_repeat 3 62 0 217 337 11 0 chr2 122184947 122185042 -128502812 - MIR SINE MIR -80 182 87 2371 97 0 0 chr2 122185220 122185520 -128502334 + AluSg1 SINE Alu 1 300 -9 275 325 41 18 chr2 122185694 122185863 -128501991 - L1ME LINE L1 -239 5882 5710 279 325 17 8 chr2 122186037 122186157 -128501697 + L1ME LINE L1 5674 5794 -368 1259 264 50 29 chr2 122186160 122186581 -128501273 - MLT1J LTR MaLR -3 508 79 245 377 97 0 chr2 122186783 122186937 -128500917 - L3 LINE CR1 -122 1455 1287 2569 81 0 0 chr2 122187427 122187735 -128500119 + AluY SINE Alu 1 308 -3 320 213 53 0 chr2 122187749 122187824 -128500030 - MER116 DNA Mariner -1 79 1 226 331 41 50 chr2 122188407 122188528 -128499326 + L2 LINE L2 3149 3268 -4 775 278 16 28 chr2 122188622 122188877 -128498977 - MLT1K LTR MaLR -77 511 260 816 150 0 0 chr2 122189038 122189171 -128498683 + FLAM_A SINE Alu 1 133 0 685 306 82 40 chr2 122190737 122191090 -128496764 + L1MC4 LINE L1 5513 5880 -1928 2335 118 0 6 chr2 122191275 122191589 -128496265 - AluSx SINE Alu 0 312 1 744 278 34 8 chr2 122192087 122192350 -128495504 + L1MC4 LINE L1 6751 7020 -1022 646 300 50 91 chr2 122192358 122192635 -128495219 + L1MC4 LINE L1 7341 7583 -459 2227 123 10 0 chr2 122192635 122192944 -128494910 - AluSx SINE Alu 0 312 1 646 300 50 91 chr2 122192944 122193263 -128494591 + L1MC4 LINE L1 7583 7913 -129 866 35 0 43 chr2 122194282 122194441 -128493413 - AluY SINE Alu 0 355 202 273 303 125 17 chr2 122194939 122195164 -128492690 - MIR SINE MIR -3 259 5 180 359 0 0 chr2 122195753 122195806 -128492048 + MIR SINE MIR 31 83 -125 3810 147 21 27 chr2 122195885 122196077 -128491777 + L1MB3 LINE L1 5417 5609 -574 1818 186 0 3 chr2 122196077 122196385 -128491469 + AluJb SINE Alu 2 308 0 3810 147 21 27 chr2 122196385 122196916 -128490938 + L1MB3 LINE L1 5609 6138 -45 2258 109 0 10 chr2 122196916 122197219 -128490635 + AluSx SINE Alu 1 300 -12 3810 147 21 27 chr2 122197219 122197263 -128490591 + L1MB3 LINE L1 6138 6181 -2 863 251 215 46 chr2 122197415 122197853 -128490001 + MLT1G LTR MaLR 79 590 0 288 287 97 85 chr2 122198576 122198818 -128489036 - L2 LINE L2 -77 3236 2989 2230 179 38 4 chr2 122198818 122199287 -128488567 + MER31A LTR ERV1 1 485 0 288 287 97 85 chr2 122199287 122199302 -128488552 - L2 LINE L2 -324 2989 2976 1393 163 0 97 chr2 122199319 122199525 -128488329 - AluJo SINE Alu 0 310 141 1838 167 30 0 chr2 122199525 122199824 -128488030 + AluJb SINE Alu 5 312 0 1393 163 0 97 chr2 122199824 122199933 -128487921 - AluJo SINE Alu -169 141 23 21 0 0 0 chr2 122199948 122199969 -128487885 + AT_rich Low_complexity Low_complexity 1 21 0 612 224 97 31 chr2 122200743 122200939 -128486915 - MER3 DNA MER1_type 0 209 1 841 200 32 5 chr2 122201104 122201289 -128486565 - MER20 DNA MER1_type -1 218 29 265 228 0 63 chr2 122202498 122202577 -128485277 + L2 LINE L2 2986 3059 -213 570 206 158 22 chr2 122203570 122203754 -128484100 - MIR SINE MIR -41 221 13 2298 90 3 0 chr2 122204230 122204531 -128483323 - AluSc SINE Alu -7 302 1 235 286 29 0 chr2 122205292 122205362 -128482492 + L2 LINE L2 3200 3271 -1 430 322 46 31 chr2 122205820 122206081 -128481773 + L1ME LINE L1 5500 5764 -357 1906 161 6 19 chr2 122207412 122207728 -128480126 + AluJb SINE Alu 1 312 0 466 255 19 38 chr2 122208059 122208216 -128479638 - MIR SINE MIR -4 258 105 587 193 0 0 chr2 122208239 122208348 -128479506 - AluSx SINE Alu -10 302 194 968 149 0 0 chr2 122208349 122208490 -128479364 - AluSx SINE Alu -171 141 1 755 166 51 40 chr2 122208639 122208814 -128479040 + MER5A DNA MER1_type 1 177 -12 616 239 62 23 chr2 122208942 122209118 -128478736 - MER5A DNA MER1_type 0 189 7 2441 85 3 10 chr2 122209667 122209973 -128477881 + AluSx SINE Alu 1 304 -8 232 313 116 27 chr2 122210713 122210825 -128477029 - L2 LINE L2 -44 3228 3107 355 225 45 18 chr2 122211008 122211119 -128476735 - L2 LINE L2 -926 2388 2275 206 320 20 80 chr2 122211105 122211205 -128476649 - MIR SINE MIR -144 118 25 * 940 251 157 13 chr2 122212487 122212553 -128475301 - LTR16C LTR ERVL -28 463 408 2200 179 44 24 chr2 122212553 122213011 -128474843 - MLT1C LTR MaLR 0 467 1 940 251 157 13 chr2 122213011 122213338 -128474516 - LTR16C LTR ERVL -83 408 13 331 343 27 0 chr2 122213682 122213828 -128474026 - L1MC4a LINE L1 -1959 5849 5700 318 330 9 9 chr2 122214274 122214383 -128473471 - MIR SINE MIR -37 225 117 226 340 14 50 chr2 122214589 122214730 -128473124 - L2 LINE L2 0 3272 3137 320 338 36 22 chr2 122215358 122215497 -128472357 - MIR3 SINE MIR -14 194 54 333 267 20 67 chr2 122215506 122215656 -128472198 - MIR SINE MIR -2 260 118 1482 214 81 42 chr2 122216566 122216689 -128471165 - MLT1E2 LTR MaLR -175 451 334 1762 178 0 16 chr2 122216689 122216998 -128470856 - AluJo SINE Alu -3 309 6 1482 214 81 42 chr2 122216998 122217308 -128470546 - MLT1E2 LTR MaLR -292 334 1 548 265 108 31 chr2 122217484 122217835 -128470019 - L1ME4a LINE L1 -2 6119 5742 1997 130 0 4 chr2 122217835 122218111 -128469743 - AluJo SINE Alu -37 275 1 293 326 35 7 chr2 122219324 122219468 -128468386 - Charlie8 DNA MER1_type -2172 245 98 821 183 55 12 chr2 122219469 122219633 -128468221 + AluJo SINE Alu 119 289 -23 252 254 0 0 chr2 122219665 122219720 -128468134 - Charlie8 DNA MER1_type -2349 68 14 223 258 41 52 chr2 122219753 122219850 -128468004 - MIR SINE MIR -69 139 44 197 333 86 5 chr2 122220086 122220272 -128467582 - L3 LINE CR1 -377 1200 1000 2199 97 32 0 chr2 122220455 122220772 -128467082 + AluSq SINE Alu 1 326 0 620 284 122 43 chr2 122220952 122221297 -128466557 - L3 LINE CR1 -686 891 520 381 286 20 49 chr2 122222295 122222498 -128465356 - L2 LINE L2 -188 3084 2888 337 316 26 26 chr2 122222527 122222679 -128465175 + L1MCa LINE L1 1923 2074 -4352 389 212 24 24 chr2 122222679 122222764 -128465090 - L1MCa LINE L1 -4362 2064 1980 686 241 33 21 chr2 122222830 122223071 -128464783 - L1MC5 LINE L1 -34 7927 7684 1964 147 84 19 chr2 122223085 122223452 -128464402 - MSTB1 LTR MaLR 0 432 42 195 204 0 0 chr2 122223452 122223496 -128464358 + T-rich Low_complexity Low_complexity 2 45 0 294 167 19 0 chr2 122223524 122223578 -128464276 - MSTB1 LTR MaLR -377 55 1 1367 230 144 43 chr2 122223584 122224188 -128463666 - L1MC5 LINE L1 -291 7670 7006 1529 168 78 6 chr2 122224203 122224549 -128463305 - MER3 DNA MER1_type 0 2624 2254 349 264 55 0 chr2 122224558 122224649 -128463205 - MER3 DNA MER1_type -68 141 46 430 160 73 93 chr2 122224697 122224847 -128463007 - L1MC5 LINE L1 -1012 6949 6803 1043 156 53 154 chr2 122224854 122225212 -128462642 - MLT1A2 LTR MaLR 0 374 53 1687 254 118 81 chr2 122225234 122226085 -128461769 - L1MC4a LINE L1 -1016 6792 5973 1773 181 7 7 chr2 122226085 122226373 -128461481 + AluJo SINE Alu 1 288 -24 1687 254 118 81 chr2 122226373 122226790 -128461064 - L1MC4a LINE L1 -1835 5973 5462 2394 117 0 0 chr2 122226790 122227097 -128460757 - AluSq SINE Alu -6 307 1 1687 254 118 81 chr2 122227097 122227281 -128460573 - L1MC4a LINE L1 -2346 5462 5286 1240 303 45 97 chr2 122227309 122228297 -128459557 - L1MC4a LINE L1 -908 5238 4303 2366 83 6 22 chr2 122229261 122229574 -128458280 - AluSq SINE Alu -5 308 1 189 167 0 56 chr2 122229591 122229645 -128458209 + L2 LINE L2 3263 3313 0 1887 161 34 3 chr2 122230522 122230846 -128457008 + MLT1A1 LTR MaLR 32 365 0 1092 246 105 75 chr2 122230926 122231023 -128456831 + MLT1G1 LTR MaLR 1 94 -496 2324 94 3 3 chr2 122231023 122231321 -128456533 + AluSx SINE Alu 1 298 -14 1092 246 105 75 chr2 122231321 122231799 -128456055 + MLT1G1 LTR MaLR 94 590 0 339 234 103 28 chr2 122232083 122232190 -128455664 + L2 LINE L2 3160 3274 -39 267 281 52 10 chr2 122232205 122232301 -128455553 - MIR3 SINE MIR -106 102 3 27 0 0 0 chr2 122233240 122233267 -128454587 + AT_rich Low_complexity Low_complexity 1 27 0 2247 94 0 14 chr2 122233267 122233564 -128454290 - AluSx SINE Alu -19 293 1 357 310 97 7 chr2 122233632 122233787 -128454067 + MIR SINE MIR 86 254 -8 249 310 0 47 chr2 122235685 122235814 -128452040 + C-rich Low_complexity Low_complexity 2 124 0 257 292 17 25 chr2 122240235 122240355 -128447499 + CT-rich Low_complexity Low_complexity 4 122 0 207 247 30 12 chr2 122240369 122240548 -128447306 + CT-rich Low_complexity Low_complexity 1 182 0 183 205 0 0 chr2 122241567 122241606 -128446248 + A-rich Low_complexity Low_complexity 1 39 0 815 141 0 0 chr2 122242240 122242361 -128445493 + FLAM_C SINE Alu 23 143 0 246 227 179 34 chr2 122242589 122242706 -128445148 + MIR3 SINE MIR 63 197 -11 321 256 29 58 chr2 122243655 122243792 -128444062 + MER5A DNA MER1_type 8 140 -49 778 287 66 24 chr2 122245668 122246093 -128441761 - L1ME4a LINE L1 -126 5995 5553 204 306 40 16 chr2 122246221 122246345 -128441509 - MIR SINE MIR -62 146 20 981 168 87 0 chr2 122246414 122246610 -128441244 + MER20 DNA MER1_type 7 219 0 219 259 17 17 chr2 122246828 122246886 -128440968 - L2 LINE L2 -2 3270 3213 772 79 8 16 chr2 122247748 122247875 -128439979 + (TCCA)n Simple_repeat Simple_repeat 3 128 0 188 331 115 23 chr2 122248415 122248545 -128439309 + MIR3 SINE MIR 51 192 -16 481 201 142 8 chr2 122249347 122249481 -128438373 + MIR SINE MIR 111 262 0 266 267 23 0 chr2 122250700 122250786 -128437068 - L1ME LINE L1 -452 5669 5582 2354 97 3 0 chr2 122251160 122251459 -128436395 - AluY SINE Alu -11 300 1 563 259 162 39 chr2 122251606 122251965 -128435889 - L1MC4a LINE L1 -1801 6007 5605 2262 102 3 34 chr2 122251967 122252289 -128435565 - AluSx SINE Alu 0 312 1 413 314 97 29 chr2 122252299 122252506 -128435348 - L1MC4a LINE L1 -2332 5476 5256 2353 68 0 59 chr2 122252510 122252831 -128435023 + AluSx SINE Alu 1 302 -10 715 116 23 0 chr2 122252896 122253025 -128434829 - L1PB4 LINE L1 -4 6152 6021 725 258 48 21 chr2 122253025 122253211 -128434643 - L1ME LINE L1 -2193 5615 5425 3759 215 64 30 chr2 122253213 122253743 -128434111 - L1ME1 LINE L1 -43 6192 5681 2318 112 7 0 chr2 122253743 122254046 -128433808 - AluSq SINE Alu -8 305 1 3759 215 64 30 chr2 122254046 122255490 -128432364 - L1ME1 LINE L1 -554 5681 4135 253 219 73 10 chr2 122255537 122255633 -128432221 - L1ME1 LINE L1 -3641 2574 2473 3487 220 122 28 chr2 122255672 122256870 -128430984 - L1ME1 LINE L1 -5047 1349 40 190 286 119 0 chr2 122257712 122257796 -128430058 - MIR3 SINE MIR -34 174 81 4194 171 53 28 chr2 122258018 122258845 -128429009 - MER21B LTR ERV1 -11 852 5 182 343 27 0 chr2 122259060 122259133 -128428721 + MIR3 SINE MIR 109 183 -25 233 366 26 26 chr2 122261158 122261352 -128426502 - MIR SINE MIR -48 214 21 213 263 77 58 chr2 122261812 122261968 -128425886 - L2 LINE L2 -221 3051 2893 260 151 0 19 chr2 122262205 122262258 -128425596 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 336 300 100 20 chr2 122263561 122263711 -128424143 - MER103 DNA DNA -3 163 2 311 265 41 0 chr2 122265550 122265648 -128422206 + MIR SINE MIR 101 202 -60 339 330 72 18 chr2 122266611 122266832 -128421022 + MIR SINE MIR 24 256 -6 278 259 103 17 chr2 122267085 122267201 -128420653 - MIR SINE MIR -34 228 103 186 326 112 0 chr2 122267450 122267548 -128420306 + MIR SINE MIR 83 191 -71 339 25 0 0 chr2 122267686 122267726 -128420128 + (TG)n Simple_repeat Simple_repeat 1 40 0 403 313 6 0 chr2 122268549 122268728 -128419126 + (TG)n Simple_repeat Simple_repeat 1 180 0 305 332 92 20 chr2 122269499 122269695 -128418159 + MIR SINE MIR 49 258 -4 439 266 22 29 chr2 122270227 122270366 -128417488 + MIR3 SINE MIR 65 202 -6 223 319 215 0 chr2 122270806 122270941 -128416913 + L2 LINE L2 2605 2768 -546 337 250 111 7 chr2 122270959 122271103 -128416751 + MER117 DNA MER1_type 5 163 -34 445 312 80 11 chr2 122271834 122272110 -128415744 - L1ME4a LINE L1 -245 5876 5582 767 152 0 7 chr2 122272752 122272903 -128414951 + CT-rich Low_complexity Low_complexity 1 150 0 832 143 74 95 chr2 122273161 122273392 -128414462 - L1MB7 LINE L1 0 6184 5959 423 307 78 0 chr2 122273494 122273647 -128414207 + Charlie8 DNA MER1_type 112 276 -2141 355 247 181 20 chr2 122275064 122275217 -128412637 - MIR SINE MIR -55 207 28 301 286 0 48 chr2 122275976 122276165 -128411689 + (TG)n Simple_repeat Simple_repeat 1 180 0 340 309 95 30 chr2 122277963 122278131 -128409723 - MIR SINE MIR 0 262 84 543 250 27 9 chr2 122278491 122278689 -128409165 - MIR SINE MIR 0 262 2 207 167 0 0 chr2 122278776 122278818 -128409036 + (TG)n Simple_repeat Simple_repeat 2 43 0 219 232 0 0 chr2 122279282 122279338 -128408516 + GA-rich Low_complexity Low_complexity 2 57 0 305 303 37 28 chr2 122279498 122279607 -128408247 - MIR SINE MIR -92 170 61 226 298 124 16 chr2 122279903 122280024 -128407830 + MIR SINE MIR 65 198 -64 2285 98 3 0 chr2 122280474 122280771 -128407083 + AluSx SINE Alu 1 298 -14 547 383 63 16 chr2 122280817 122281133 -128406721 - L1ME4a LINE L1 -145 5976 5646 376 357 88 6 chr2 122281248 122281430 -128406424 - MIR SINE MIR -18 244 48 280 235 30 91 chr2 122281457 122281531 -128406323 + L3 LINE CR1 1426 1490 -87 1015 204 68 10 chr2 122281531 122281737 -128406117 - MER20 DNA MER1_type -1 218 1 280 235 30 91 chr2 122281737 122281794 -128406060 + L3 LINE CR1 1490 1549 -28 379 295 68 89 chr2 122283614 122283895 -128403959 + L2 LINE L2 2997 3271 -1 29 146 0 0 chr2 122284379 122284420 -128403434 + AT_rich Low_complexity Low_complexity 1 41 0 344 377 122 30 chr2 122284420 122284757 -128403097 - L1M4c LINE L1 -4127 2255 1883 397 272 118 15 chr2 122287707 122287843 -128400011 - MIR SINE MIR -91 171 22 182 326 78 61 chr2 122288619 122288649 -128399205 + L2 LINE L2 2814 2842 -430 2166 99 30 0 chr2 122288649 122288951 -128398903 - AluSx SINE Alu -1 311 1 182 326 78 61 chr2 122288951 122289165 -128398689 + L2 LINE L2 2842 3062 -210 303 303 18 28 chr2 122289384 122289493 -128398361 + MIR SINE MIR 20 127 -81 215 269 118 11 chr2 122290613 122290706 -128397148 - MIR SINE MIR -79 183 81 338 335 0 22 chr2 122291240 122291422 -128396432 + (TG)n Simple_repeat Simple_repeat 1 178 0 188 255 21 7 chr2 122291451 122291592 -128396262 + (TG)n Simple_repeat Simple_repeat 1 143 0 605 276 72 9 chr2 122291865 122292086 -128395768 - Charlie4a DNA MER1_type -3 505 271 1972 115 4 4 chr2 122292246 122292547 -128395307 - AluSc SINE Alu 0 301 1 227 303 10 40 chr2 122292620 122292719 -128395135 + MER5A DNA MER1_type 35 130 -59 205 312 34 19 chr2 122293474 122293582 -128394272 + MIR SINE MIR 43 151 -67 338 320 58 0 chr2 122293784 122293940 -128393914 - L2 LINE L2 -194 3078 2914 932 122 98 18 chr2 122294696 122294860 -128392994 + AluJo SINE Alu 120 296 -16 2214 122 0 3 chr2 122294865 122295177 -128392677 + AluSx SINE Alu 1 311 -1 2159 75 21 0 chr2 122295393 122295714 -128392140 + AluSp SINE Alu 1 327 0 594 264 159 54 chr2 122295794 122296165 -128391689 + L2 LINE L2 2432 2841 -473 266 301 209 36 chr2 122296217 122296413 -128391441 + L2 LINE L2 3081 3310 -3 219 231 0 0 chr2 122297339 122297378 -128390476 + polypurine Low_complexity Low_complexity 1 39 0 328 310 0 30 chr2 122297937 122298037 -128389817 - MER5A DNA MER1_type -79 110 14 180 0 0 0 chr2 122300089 122300109 -128387745 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2257 74 10 10 chr2 122300112 122300421 -128387433 - AluY SINE Alu -2 309 1 2289 94 0 0 chr2 122300747 122301044 -128386810 - AluSx SINE Alu -5 307 11 281 285 42 17 chr2 122301051 122301232 -128386622 + L1ME LINE L1 5696 5884 -237 275 309 81 13 chr2 122301364 122301513 -128386341 - MIR3 SINE MIR -16 192 34 190 327 0 79 chr2 122301569 122301670 -128386184 + MIR SINE MIR 45 137 -71 995 179 16 0 chr2 122302450 122302634 -128385220 + MER5A DNA MER1_type 1 187 -2 538 216 273 17 chr2 122302808 122302984 -128384870 + MIR SINE MIR 13 233 -29 216 180 0 20 chr2 122303400 122303450 -128384404 - MER5B DNA MER1_type -99 79 31 334 332 146 9 chr2 122304480 122304700 -128383154 + MIR SINE MIR 2 251 -11 410 279 101 8 chr2 122305142 122305271 -128382583 - MIR3 SINE MIR -22 186 46 306 360 123 4 chr2 122306795 122307023 -128380831 + MIR SINE MIR 2 256 -6 239 303 20 40 chr2 122307131 122307283 -128380571 - L2 LINE L2 -251 3021 2873 2616 193 9 2 chr2 122308600 122309139 -128378715 + L1MB7 LINE L1 5620 6162 -22 224 185 19 0 chr2 122309147 122309201 -128378653 + GA-rich Low_complexity Low_complexity 3 57 0 325 324 125 26 chr2 122310297 122310720 -128377134 - MLT1K LTR MaLR -6 582 118 228 111 0 0 chr2 122311440 122311476 -128376378 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 472 243 58 52 chr2 122311478 122311651 -128376203 - L2 LINE L2 -1 3312 3139 445 259 178 4 chr2 122313474 122313710 -128374144 - LTR16C LTR ERVL 0 491 215 1985 135 11 62 chr2 122314119 122314474 -128373380 + MER1B DNA MER1_type 1 337 0 207 0 0 0 chr2 122314576 122314599 -128373255 + (TCCTG)n Simple_repeat Simple_repeat 5 27 0 587 258 53 49 chr2 122315290 122315534 -128372320 - MLT2F LTR ERVL -2 661 417 2230 168 112 34 chr2 122315728 122315795 -128372059 - Charlie1 DNA MER1_type -1 2760 2700 2229 80 3 17 chr2 122315795 122316097 -128371757 - AluSx SINE Alu -14 298 1 2230 168 112 34 chr2 122316097 122316625 -128371229 - Charlie1 DNA MER1_type -61 2700 2118 272 271 62 0 chr2 122316666 122316762 -128371092 - Charlie1 DNA MER1_type -2611 150 49 * 327 242 102 39 chr2 122316761 122316889 -128370965 - MLT2F LTR ERVL -524 139 4 218 182 0 23 chr2 122318418 122318462 -128369392 - MIR SINE MIR -168 94 52 2159 105 10 0 chr2 122318842 122319138 -128368716 - AluSq SINE Alu -10 303 5 319 340 54 71 chr2 122319283 122319577 -128368277 - L2 LINE L2 -13 3259 2971 200 196 137 0 chr2 122321375 122321426 -128366428 - MIR SINE MIR -88 174 117 285 360 91 11 chr2 122321664 122321850 -128366004 + MIR SINE MIR 48 248 -14 236 294 103 20 chr2 122322171 122322317 -128365537 - L1ME4a LINE L1 -3 6118 5961 183 346 0 0 chr2 122323757 122323809 -128364045 - MIR SINE MIR -80 128 77 1762 152 34 0 chr2 122324413 122324709 -128363145 - AluJb SINE Alu -6 306 1 270 250 142 42 chr2 122326213 122326333 -128361521 - MIR SINE MIR -115 147 16 246 209 90 0 chr2 122326616 122326683 -128361171 + L2 LINE L2 3196 3268 -4 4315 151 18 17 chr2 122326931 122327653 -128360201 + L1MB3 LINE L1 5460 6182 -1 438 304 6 11 chr2 122328639 122328820 -128359034 + (CA)n Simple_repeat Simple_repeat 1 180 0 462 330 17 6 chr2 122328974 122329153 -128358701 + MIR SINE MIR 8 188 -74 195 204 0 0 chr2 122329537 122329581 -128358273 + (TG)n Simple_repeat Simple_repeat 2 45 0 209 132 38 57 chr2 122329896 122329949 -128357905 + L2 LINE L2 3198 3249 -23 203 161 63 35 chr2 122330392 122330566 -128357288 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 222 193 0 0 chr2 122330649 122330706 -128357148 + CT-rich Low_complexity Low_complexity 2 58 0 188 273 0 0 chr2 122331388 122331432 -128356422 + MIR SINE MIR 169 212 -50 202 203 108 27 chr2 122332288 122332362 -128355492 + MIR SINE MIR 45 124 -84 211 261 0 45 chr2 122332682 122332770 -128355084 + CT-rich Low_complexity Low_complexity 5 88 0 296 222 52 25 chr2 122333000 122333138 -128354716 + MIR SINE MIR 40 181 -73 2351 227 41 11 chr2 122333689 122334230 -128353624 - MER74A LTR ERVL 0 558 2 2077 113 3 0 chr2 122334967 122335258 -128352596 - AluSx SINE Alu -12 300 9 276 77 0 0 chr2 122335363 122335402 -128352452 + (TG)n Simple_repeat Simple_repeat 2 40 0 28 0 0 0 chr2 122335406 122335434 -128352420 + AT_rich Low_complexity Low_complexity 1 28 0 637 238 26 13 chr2 122335516 122335667 -128352187 + MER97a DNA MER1_type? 24 176 -718 299 342 21 21 chr2 122335873 122336113 -128351741 - L1ME3A LINE L1 -231 5922 5683 303 304 11 0 chr2 122336373 122336461 -128351393 - L1ME3A LINE L1 -531 5622 5531 823 319 61 46 chr2 122336567 122336693 -128351161 - L1ME3A LINE L1 -769 5360 5237 2604 33 0 0 chr2 122336693 122336995 -128350859 + AluY SINE Alu 1 302 -9 823 319 61 46 chr2 122336995 122338097 -128349757 - L1ME3A LINE L1 -892 5237 4114 330 141 31 0 chr2 122338099 122338162 -128349692 - Charlie5 DNA MER1_type 0 2623 2559 450 65 78 13 chr2 122338162 122338231 -128349623 - MSTB2 LTR MaLR 0 457 384 1342 156 47 24 chr2 122338231 122338543 -128349311 + MER7A DNA MER2_type 1 337 0 556 165 22 0 chr2 122338543 122338626 -128349228 - MSTD LTR MaLR -69 327 243 462 318 55 20 chr2 122339023 122339137 -128348717 - L1ME3A LINE L1 -2787 3342 3233 2168 114 0 3 chr2 122339137 122339443 -128348411 - AluSx SINE Alu -7 305 1 462 318 55 20 chr2 122339443 122339731 -128348123 - L1ME3A LINE L1 -2896 3233 2926 1073 318 99 37 chr2 122339733 122340669 -128347185 - L1MEd LINE L1 -4888 1231 3 250 194 32 16 chr2 122341168 122341230 -128346624 - L2 LINE L2 -1 3312 3250 369 0 0 0 chr2 122341428 122341469 -128346385 + (TG)n Simple_repeat Simple_repeat 1 41 0 25 0 0 0 chr2 122341562 122341587 -128346267 + AT_rich Low_complexity Low_complexity 1 25 0 790 275 22 25 chr2 122341845 122342128 -128345726 - L1MC4a LINE L1 -164 5957 5688 186 232 107 0 chr2 122342833 122342889 -128344965 - MIR SINE MIR -65 143 82 2203 112 0 0 chr2 122343241 122343546 -128344308 - AluSx SINE Alu -7 305 1 761 241 92 19 chr2 122343714 122343921 -128343933 - MER58A DNA MER1_type -1 223 2 423 268 41 24 chr2 122344090 122344213 -128343641 + MIR3 SINE MIR 78 202 -6 2125 135 0 0 chr2 122344574 122344885 -128342969 + AluSx SINE Alu 1 311 -1 442 252 220 6 chr2 122345424 122345583 -128342271 - MIR SINE MIR -15 247 55 223 344 54 0 chr2 122346327 122346420 -128341434 + MIR SINE MIR 91 188 -74 255 245 0 0 chr2 122346682 122346731 -128341123 + MER81 DNA DNA 2 50 -64 439 267 17 0 chr2 122346902 122347018 -128340836 - ORSL DNA AcHobo -157 118 1 2439 144 51 5 chr2 122348520 122348931 -128338923 + L1MB3 LINE L1 5754 6183 0 309 26 0 0 chr2 122349018 122349056 -128338798 + (ATG)n Simple_repeat Simple_repeat 1 38 0 1622 315 74 24 chr2 122349187 122349873 -128337981 + HAL1 LINE L1 755 1504 -1003 282 95 0 0 chr2 122349873 122349915 -128337939 + (CAGAA)n Simple_repeat Simple_repeat 2 43 0 1622 315 74 24 chr2 122349915 122350187 -128337667 + HAL1 LINE L1 1504 1761 -746 227 291 98 75 chr2 122350379 122350633 -128337221 + HAL1 LINE L1 2215 2474 -33 251 86 0 0 chr2 122350646 122350681 -128337173 + U2 snRNA snRNA 1 35 -153 316 326 107 40 chr2 122351284 122351508 -128336346 - L2 LINE L2 -76 3237 2999 625 282 195 14 chr2 122353576 122353863 -128333991 - L2 LINE L2 -2 3270 2932 804 189 56 28 chr2 122354307 122354487 -128333367 - MER5A DNA MER1_type -4 185 1 237 322 0 44 chr2 122354885 122354975 -128332879 + MARNA DNA Mariner 171 256 -330 551 297 62 0 chr2 122355235 122355444 -128332410 - MIR SINE MIR -33 229 8 301 286 133 6 chr2 122355564 122355728 -128332126 - MIR SINE MIR -59 203 16 473 255 6 0 chr2 122356844 122357001 -128330853 + (CCCA)n Simple_repeat Simple_repeat 2 159 0 774 192 0 8 chr2 122357238 122357487 -128330367 + (CCCA)n Simple_repeat Simple_repeat 1 246 0 183 42 0 0 chr2 122357586 122357610 -128330244 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 272 343 40 3 chr2 122357950 122358085 -128329769 + MIR SINE MIR 2 140 -68 224 257 326 21 chr2 122358991 122359135 -128328719 - MIR3 SINE MIR -15 193 6 2142 100 7 7 chr2 122359271 122359572 -128328282 - AluSc SINE Alu -8 301 1 722 113 0 0 chr2 122359572 122359669 -128328185 - AluSp/q SINE Alu -11 302 206 677 115 0 0 chr2 122359673 122359769 -128328085 - AluS SINE Alu -215 97 2 195 236 56 42 chr2 122360683 122360755 -128327099 + MIR SINE MIR 116 188 -74 215 325 122 32 chr2 122360953 122361076 -128326778 - MIR SINE MIR -114 148 15 249 208 0 0 chr2 122362161 122362209 -128325645 - L2 LINE L2 -28 3285 3238 203 178 256 44 chr2 122362219 122362309 -128325545 + MIR SINE MIR 33 141 -67 1918 73 91 18 chr2 122364281 122364556 -128323298 - AluY SINE Alu -16 295 1 265 297 20 20 chr2 122366862 122366963 -128320891 + MIR3 SINE MIR 83 183 -25 191 122 0 49 chr2 122367608 122367649 -128320205 + (GGGA)n Simple_repeat Simple_repeat 2 40 0 312 85 85 0 chr2 122368855 122368914 -128318940 - L1 LINE L1 -1323 4823 4760 352 271 24 33 chr2 122370207 122370363 -128317491 - MIR3 SINE MIR -24 184 33 275 311 39 10 chr2 122370508 122370611 -128317243 + MIR SINE MIR 39 144 -118 22 0 0 0 chr2 122371586 122371608 -128316246 + AT_rich Low_complexity Low_complexity 1 22 0 705 311 62 12 chr2 122372404 122372645 -128315209 + MIR SINE MIR 7 259 -3 240 232 12 37 chr2 122372770 122372852 -128315002 - L1ME4a LINE L1 -100 6021 5942 1740 207 73 15 chr2 122372983 122373461 -128314393 - Charlie1b DNA MER1_type -7 516 11 292 308 127 51 chr2 122375493 122375808 -128312046 + L1MD2 LINE L1 4595 4933 -1213 2418 64 0 3 chr2 122375859 122376171 -128311683 + AluY SINE Alu 1 311 0 473 256 58 0 chr2 122376620 122376776 -128311078 + MER69A DNA AcHobo 2 166 -11 2144 230 42 28 chr2 122377166 122377765 -128310089 - L1ME3A LINE L1 -12 6158 5552 230 266 147 0 chr2 122378226 122378369 -128309485 + L1ME LINE L1 5751 5914 -207 2206 79 21 0 chr2 122378450 122378740 -128309114 + AluY SINE Alu 1 296 -15 346 315 47 8 chr2 122380801 122380928 -128306926 + MIR SINE MIR 102 233 -29 379 274 17 33 chr2 122381179 122381540 -128306314 + G-rich Low_complexity Low_complexity 1 354 0 212 352 51 51 chr2 122381943 122382139 -128305715 + L3 LINE CR1 770 965 -612 1031 227 15 19 chr2 122382813 122383077 -128304777 - L1ME1 LINE L1 -5 6161 5899 1689 163 11 11 chr2 122383191 122383498 -128304356 + AluJo SINE Alu 1 307 0 431 289 47 13 chr2 122383545 122383694 -128304160 - MIR SINE MIR -30 232 79 235 336 160 0 chr2 122385941 122386060 -128301794 - MIR SINE MIR -3 259 122 192 40 0 0 chr2 122386060 122386085 -128301769 + (TG)n Simple_repeat Simple_repeat 2 26 0 270 0 0 0 chr2 122386146 122386176 -128301678 + (TG)n Simple_repeat Simple_repeat 2 31 0 1707 161 3 7 chr2 122386193 122386507 -128301347 - AluJb SINE Alu 0 313 1 204 396 49 12 chr2 122386515 122386679 -128301175 - L2 LINE L2 -576 2738 2569 4149 198 47 48 chr2 122389347 122390641 -128297213 + L1MD2 LINE L1 5062 6351 -8 183 80 0 0 chr2 122390935 122390960 -128296894 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 361 263 325 5 chr2 122391264 122391458 -128296396 + MIR SINE MIR 2 257 -5 183 281 18 18 chr2 122391984 122392041 -128295813 + L2 LINE L2 3237 3293 -20 679 268 153 17 chr2 122392516 122392870 -128294984 + LTR16C LTR ERVL 83 484 -7 243 204 0 0 chr2 122393566 122393620 -128294234 + A-rich Low_complexity Low_complexity 1 54 0 2249 101 7 0 chr2 122394627 122394934 -128292920 - AluSq SINE Alu -4 309 1 2212 125 0 0 chr2 122395358 122395670 -128292184 + AluSx SINE Alu 1 312 0 240 386 9 18 chr2 122395851 122395965 -128291889 - MIR SINE MIR -50 212 100 527 98 11 0 chr2 122396568 122396660 -128291194 + (CA)n Simple_repeat Simple_repeat 2 94 0 255 239 120 33 chr2 122397619 122397711 -128290143 + MIR3 SINE MIR 65 164 -44 369 0 0 0 chr2 122398099 122398140 -128289714 + (CA)n Simple_repeat Simple_repeat 2 42 0 192 356 106 15 chr2 122398443 122398575 -128289279 - MIR SINE MIR -6 256 113 314 203 40 14 chr2 122398688 122398762 -128289092 - MIR SINE MIR -71 137 62 306 73 0 0 chr2 122399320 122399361 -128288493 + (CA)n Simple_repeat Simple_repeat 2 42 0 182 350 56 49 chr2 122399590 122399733 -128288121 + MIR SINE MIR 119 262 0 451 244 57 0 chr2 122399853 122399976 -128287878 - MER5A DNA MER1_type -59 130 1 395 258 166 26 chr2 122400180 122400331 -128287523 - MER5A DNA MER1_type 0 189 18 181 364 136 11 chr2 122400406 122400582 -128287272 + MIR SINE MIR 64 261 -1 667 215 0 61 chr2 122401925 122402088 -128285766 - MER63A DNA MER1_type 0 210 58 1690 128 109 0 chr2 122403016 122403281 -128284573 + AluSx SINE Alu 1 294 -18 358 282 86 6 chr2 122404548 122404711 -128283143 - MER5B DNA MER1_type 0 178 3 207 162 0 0 chr2 122405122 122405159 -128282695 + GA-rich Low_complexity Low_complexity 3 39 0 381 241 0 7 chr2 122405371 122405473 -128282381 - MIR SINE MIR -77 131 33 369 317 59 30 chr2 122407524 122407751 -128280103 + MIR SINE MIR 3 225 -37 2294 52 14 0 chr2 122409494 122409780 -128278074 + AluY SINE Alu 1 290 -21 652 247 21 40 chr2 122411085 122411273 -128276581 + MIR SINE MIR 33 216 -46 201 121 0 0 chr2 122411501 122411534 -128276320 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 1690 179 22 6 chr2 122413124 122413443 -128274411 + MER33 DNA MER1_type 1 324 0 401 307 0 0 chr2 122414655 122414756 -128273098 - MIR SINE MIR -62 200 100 182 258 73 73 chr2 122415973 122416097 -128271757 + MIR3 SINE MIR 84 207 -1 * 259 321 24 0 chr2 122416040 122416124 -128271730 - MIR SINE MIR -10 252 167 497 254 37 8 chr2 122416421 122416555 -128271299 + MIR SINE MIR 40 177 -85 210 37 0 0 chr2 122417016 122417043 -128270811 + (CA)n Simple_repeat Simple_repeat 1 27 0 306 0 0 0 chr2 122417691 122417725 -128270129 + (CA)n Simple_repeat Simple_repeat 1 34 0 508 290 121 31 chr2 122417734 122417958 -128269896 + L2 LINE L2 2920 3163 -109 323 279 0 0 chr2 122418600 122418686 -128269168 - MER94 DNA DNA -48 86 1 3231 233 53 12 chr2 122419559 122420485 -128267369 - L1MC4a LINE L1 -1 7807 6844 424 279 21 58 chr2 122421041 122421269 -128266585 - MIR SINE MIR -25 237 19 513 306 44 17 chr2 122421367 122421547 -128266307 + MER5A DNA MER1_type 1 185 -4 1528 230 64 39 chr2 122421846 122422328 -128265526 - MLT1D LTR MaLR -6 499 6 312 325 81 16 chr2 122422417 122422540 -128265314 - MIR SINE MIR -35 227 97 396 345 68 10 chr2 122423872 122424078 -128263776 + MIR SINE MIR 24 241 -21 206 312 26 0 chr2 122425603 122425680 -128262174 - L3 LINE CR1 -201 1376 1298 215 344 140 25 chr2 122426019 122426333 -128261521 - L2 LINE L2 -2 3270 2921 551 233 191 3 chr2 122426716 122426907 -128260947 - MIR SINE MIR -14 248 12 258 132 0 0 chr2 122429474 122429512 -128258342 - Alu SINE Alu -264 38 1 1120 193 116 110 chr2 122429690 122430173 -128257681 + MLT1D LTR MaLR 20 505 0 913 155 25 25 chr2 122430354 122430515 -128257339 + FRAM SINE Alu 1 161 -5 252 0 0 0 chr2 122431799 122431827 -128256027 + (T)n Simple_repeat Simple_repeat 1 28 0 211 376 41 24 chr2 122432306 122432476 -128255378 - L2 LINE L2 -106 3207 3035 401 181 202 0 chr2 122432729 122432823 -128255031 + MER5A DNA MER1_type 17 129 -60 2054 109 10 0 chr2 122435089 122435391 -128252463 - AluSx SINE Alu -7 305 1 317 311 126 22 chr2 122435424 122435559 -128252295 - MIR SINE MIR -111 151 3 189 0 0 0 chr2 122437959 122437980 -128249874 + (CTGGGG)n Simple_repeat Simple_repeat 3 23 0 375 295 82 0 chr2 122438172 122438319 -128249535 - MIR3 SINE MIR -16 192 34 448 315 166 11 chr2 122438354 122438845 -128249009 + L2 LINE L2 2698 3272 0 180 313 0 0 chr2 122439183 122439231 -128248623 + MIR SINE MIR 107 154 -108 491 202 31 28 chr2 122439715 122440076 -128247778 + (CA)n Simple_repeat Simple_repeat 1 362 0 403 303 29 11 chr2 122440011 122440186 -128247668 + (CATATA)n Simple_repeat Simple_repeat 1 178 0 * 283 129 48 40 chr2 122440189 122440313 -128247541 + (CA)n Simple_repeat Simple_repeat 2 126 0 410 178 22 33 chr2 122440344 122440524 -128247330 + (CA)n Simple_repeat Simple_repeat 2 179 0 341 351 0 0 chr2 122441033 122441164 -128246690 + MIR SINE MIR 47 177 -85 258 32 0 0 chr2 122441189 122441220 -128246634 + (CA)n Simple_repeat Simple_repeat 2 32 0 466 317 75 3 chr2 122441504 122441708 -128246146 - MIR SINE MIR -11 251 33 2156 174 53 16 chr2 122442049 122442436 -128245418 + L1MB3 LINE L1 5737 6143 -40 2626 39 0 3 chr2 122442436 122442747 -128245107 + AluY SINE Alu 1 310 -1 2156 174 53 16 chr2 122442747 122442790 -128245064 + L1MB3 LINE L1 6143 6183 0 734 82 61 0 chr2 122442921 122443019 -128244835 + AluSg SINE Alu 21 124 -186 459 0 0 0 chr2 122445729 122445780 -128242074 + (CCCTG)n Simple_repeat Simple_repeat 1 51 0 274 301 102 30 chr2 122445844 122446010 -128241844 + MER5B DNA MER1_type 1 178 0 309 318 11 0 chr2 122447488 122447576 -128240278 - MIR SINE MIR -109 153 65 496 339 60 0 chr2 122448019 122448202 -128239652 + MIR SINE MIR 46 239 -23 349 309 37 37 chr2 122448299 122448461 -128239393 - MIR SINE MIR -70 192 31 354 231 8 17 chr2 122449124 122449139 -128238715 - L1MA4A LINE L1 -6 6297 6283 670 201 27 0 chr2 122449139 122449288 -128238566 - L1PB4 LINE L1 -2 6154 6002 272 272 22 22 chr2 122449675 122449767 -128238087 - L3b LINE CR1 -117 1466 1375 2313 89 10 0 chr2 122450888 122451192 -128236662 + AluSq SINE Alu 1 307 -6 629 303 52 39 chr2 122451386 122452150 -128235704 - L1ME3A LINE L1 -199 5971 5161 251 336 28 37 chr2 122452360 122452467 -128235387 + L2 LINE L2 3008 3113 -159 1372 229 93 18 chr2 122454057 122454506 -128233348 - MLT1D LTR MaLR -4 501 19 741 165 0 0 chr2 122454679 122454878 -128232976 + (TTCA)n Simple_repeat Simple_repeat 1 199 0 271 281 91 94 chr2 122454878 122455262 -128232592 - L2 LINE L2 0 3272 2890 675 273 63 26 chr2 122455717 122456084 -128231770 - L2 LINE L2 -565 2749 2310 187 340 0 0 chr2 122456594 122456644 -128231210 + L2 LINE L2 3004 3053 -219 194 308 66 11 chr2 122457469 122457560 -128230294 - MIR SINE MIR -43 219 124 234 239 34 102 chr2 122457882 122457970 -128229884 + MIR SINE MIR 174 255 -7 312 319 25 17 chr2 122459763 122459882 -128227972 - L2 LINE L2 -5 3267 3148 391 277 14 7 chr2 122460141 122460289 -128227565 + MER113 DNA MER1_type? 24 172 -349 185 259 49 37 chr2 122461833 122461914 -128225940 - MIR SINE MIR -158 104 23 219 384 72 16 chr2 122462049 122462174 -128225680 + L2 LINE L2 3141 3272 0 410 305 134 12 chr2 122462919 122463083 -128224771 - MIR SINE MIR -12 250 67 339 248 28 0 chr2 122463203 122463312 -128224542 + (TG)n Simple_repeat Simple_repeat 2 113 0 426 253 104 26 chr2 122463449 122463603 -128224251 + MIR SINE MIR 88 253 -9 225 271 90 9 chr2 122463836 122464003 -128223851 - L2 LINE L2 -183 3089 2865 206 340 229 5 chr2 122464054 122464430 -128223424 - L2 LINE L2 -568 2746 2287 305 245 92 31 chr2 122464551 122464649 -128223205 + MIR SINE MIR 10 113 -149 218 342 133 17 chr2 122465920 122466040 -128221814 - MIR3 SINE MIR -4 204 71 277 242 164 8 chr2 122466941 122467069 -128220785 - MIR SINE MIR -8 254 107 259 369 9 9 chr2 122467335 122467446 -128220408 + (CGTG)n Simple_repeat Simple_repeat 4 114 0 970 252 90 16 chr2 122467754 122468075 -128219779 + L1ME3A LINE L1 5794 6138 -32 392 270 128 7 chr2 122468152 122468300 -128219554 - MIR SINE MIR -41 221 56 689 211 76 11 chr2 122469206 122469391 -128218463 - MLT1F1 LTR MaLR 0 567 371 490 224 35 50 chr2 122469425 122469626 -128218228 - MLT1F1 LTR MaLR -267 287 75 249 192 39 0 chr2 122470713 122470765 -128217089 + L2 LINE L2 3255 3308 -5 231 36 0 0 chr2 122471960 122471988 -128215866 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 192 338 49 49 chr2 122472169 122472311 -128215543 + L2 LINE L2 3042 3183 -89 257 109 22 0 chr2 122474456 122474502 -128213352 + (TG)n Simple_repeat Simple_repeat 1 47 0 345 309 68 8 chr2 122475464 122475602 -128212252 + MIR SINE MIR 21 152 -56 210 191 0 0 chr2 122475841 122475883 -128211971 + (CA)n Simple_repeat Simple_repeat 2 43 0 249 257 0 0 chr2 122477154 122477224 -128210630 + LOR1a LTR ERV1 238 307 -190 712 219 126 17 chr2 122477247 122477323 -128210531 + LOR1a LTR ERV1 234 300 -197 2050 102 3 3 chr2 122477323 122477608 -128210246 - AluSx SINE Alu -5 307 23 712 219 126 17 chr2 122477608 122477769 -128210085 + LOR1a LTR ERV1 300 497 0 1088 278 96 8 chr2 122478247 122478621 -128209233 + MLT1I LTR MaLR 3 409 0 1687 196 50 110 chr2 122478964 122479086 -128208768 + MLT1D LTR MaLR 2 130 -375 1770 162 3 31 chr2 122479086 122479407 -128208447 + AluJo SINE Alu 1 312 0 1687 196 50 110 chr2 122479407 122479434 -128208420 + MLT1D LTR MaLR 130 157 -348 946 107 28 11 chr2 122479434 122479611 -128208243 + GA-rich Low_complexity Low_complexity 1 180 0 1687 196 50 110 chr2 122479611 122479995 -128207859 + MLT1D LTR MaLR 157 504 -1 914 220 10 34 chr2 122480445 122480654 -128207200 - MER3 DNA MER1_type -1 208 5 247 274 0 14 chr2 122481328 122481401 -128206453 + LTR33A LTR ERVL 446 517 -6 299 328 25 34 chr2 122482188 122482218 -128205636 - L2 LINE L2 -2 3270 3241 2211 180 37 22 chr2 122482218 122482678 -128205176 + MLT1C LTR MaLR 1 467 0 299 328 25 34 chr2 122482678 122482766 -128205088 - L2 LINE L2 -31 3241 3153 335 320 33 52 chr2 122482989 122483142 -128204712 - MIR3 SINE MIR -49 159 10 379 271 20 53 chr2 122483824 122483975 -128203879 + MIR SINE MIR 3 148 -114 21 0 0 0 chr2 122484226 122484247 -128203607 + AT_rich Low_complexity Low_complexity 1 21 0 2474 157 52 0 chr2 122484373 122484780 -128203074 + MSTA LTR MaLR 1 428 0 2164 114 10 0 chr2 122485334 122485642 -128202212 + AluSx SINE Alu 1 311 -1 597 255 133 38 chr2 122485919 122486182 -128201672 - MLT1I LTR MaLR -4 405 118 1769 243 61 17 chr2 122486493 122487020 -128200834 + L1MB7 LINE L1 5620 6169 -15 207 204 0 0 chr2 122487318 122487372 -128200482 + (TTCA)n Simple_repeat Simple_repeat 1 54 0 403 276 37 22 chr2 122487457 122487591 -128200263 - L2 LINE L2 -3 3310 3175 800 246 96 0 chr2 122488152 122488339 -128199515 + MER3 DNA MER1_type 1 205 -4 2214 99 7 0 chr2 122488389 122488693 -128199161 + AluSg SINE Alu 1 306 -4 180 0 0 0 chr2 122488728 122488748 -128199106 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 238 318 12 35 chr2 122488748 122488822 -128199032 - L2 LINE L2 -11 3261 3188 508 271 0 0 chr2 122490207 122490325 -128197529 - MIR SINE MIR -74 188 71 222 290 14 14 chr2 122490624 122490693 -128197161 + MIR SINE MIR 109 177 -85 323 296 8 56 chr2 122490837 122490962 -128196892 + L2 LINE L2 2669 2787 -527 449 219 46 9 chr2 122491071 122491191 -128196663 - MIR SINE MIR -68 140 18 475 207 0 180 chr2 122491540 122491602 -128196252 - MER5A DNA MER1_type -2 187 116 2040 198 16 0 chr2 122491602 122491985 -128195869 + L1MB5 LINE L1 5777 6165 -9 2267 89 3 13 chr2 122491985 122492289 -128195565 - AluSp SINE Alu -12 301 1 475 207 0 180 chr2 122492289 122492447 -128195407 - MER5A DNA MER1_type -71 118 6 378 350 99 32 chr2 122493233 122493698 -128194156 + L2 LINE L2 2818 3313 0 204 217 0 0 chr2 122493788 122493834 -128194020 + (TG)n Simple_repeat Simple_repeat 1 46 0 314 284 134 62 chr2 122494541 122494862 -128192992 - L2 LINE L2 -2 3270 2927 291 327 59 55 chr2 122495653 122495907 -128191947 + L2 LINE L2 3010 3264 -8 194 287 81 29 chr2 122496612 122496748 -128191106 - L2 LINE L2 -226 3046 2904 240 275 138 0 chr2 122496887 122496996 -128190858 + LTR33 LTR ERVL 101 224 -297 340 259 82 20 chr2 122497060 122497207 -128190647 + LTR33 LTR ERVL 335 490 -31 340 311 30 7 chr2 122497294 122497429 -128190425 + MER117 DNA MER1_type 31 168 -29 308 261 52 20 chr2 122498245 122498398 -128189456 - L1ME4a LINE L1 0 6121 5964 1182 179 40 17 chr2 122500449 122500751 -128187103 - MER33 DNA MER1_type -22 302 1 208 314 194 8 chr2 122500995 122501119 -128186735 + MIR SINE MIR 57 203 -59 1432 151 126 4 chr2 122502203 122502474 -128185380 - AluJo SINE Alu -8 304 1 267 250 25 12 chr2 122502662 122502742 -128185112 + HsTC2 DNA Tc2 4 84 -1814 4012 189 31 97 chr2 122502786 122504092 -128183762 - L1MB7 LINE L1 -16 6168 5011 2212 88 3 3 chr2 122504092 122504386 -128183468 - AluSx SINE Alu -16 296 3 4012 189 31 97 chr2 122504386 122504715 -128183139 - L1MB7 LINE L1 -1173 5011 4662 319 277 9 27 chr2 122504724 122504836 -128183018 - MARNA DNA Mariner -199 387 278 327 203 0 0 chr2 122504983 122505057 -128182797 + CT-rich Low_complexity Low_complexity 2 75 0 451 332 176 15 chr2 122505058 122505450 -128182404 - L2 LINE L2 -1 3312 2858 310 347 78 41 chr2 122505555 122505800 -128182054 + L1ME4a LINE L1 5857 6110 -11 289 244 51 0 chr2 122506320 122506398 -128181456 + MIR SINE MIR 101 182 -80 277 211 35 0 chr2 122506499 122506556 -128181298 - MIR SINE MIR -59 149 91 373 183 19 0 chr2 122507088 122507192 -128180662 + (TG)n Simple_repeat Simple_repeat 2 107 0 249 327 112 0 chr2 122507203 122507310 -128180544 + MIR SINE MIR 30 148 -60 188 391 0 0 chr2 122509337 122509401 -128178453 - L2 LINE L2 -72 3241 3178 234 260 0 0 chr2 122509882 122509932 -128177922 - MIR SINE MIR -65 143 94 320 231 289 0 chr2 122510566 122510670 -128177184 - MIR3 SINE MIR -70 138 5 194 309 106 8 chr2 122510881 122511004 -128176850 - L2 LINE L2 -155 3117 2983 188 352 88 11 chr2 122511021 122511112 -128176742 - L2 LINE L2 -9 3263 3166 719 246 105 58 chr2 122511114 122511476 -128176378 + LTR16A LTR ERVL 42 420 -30 275 302 119 0 chr2 122511573 122511693 -128176161 - MIR SINE MIR -68 140 35 599 185 109 0 chr2 122511779 122511898 -128175956 + FLAM_A SINE Alu 2 133 0 22 0 0 0 chr2 122512065 122512087 -128175767 + GC_rich Low_complexity Low_complexity 1 22 0 357 239 186 12 chr2 122513901 122514068 -128173786 + LTR16A LTR ERVL 225 420 -30 275 302 119 0 chr2 122514165 122514285 -128173569 - MIR SINE MIR -68 140 35 599 185 109 0 chr2 122514371 122514490 -128173364 + FLAM_A SINE Alu 2 133 0 402 21 0 0 chr2 122518401 122518448 -128169406 + (CA)n Simple_repeat Simple_repeat 1 47 0 244 239 149 22 chr2 122520168 122520302 -128167552 - MLT1H LTR MaLR -17 532 382 233 254 59 76 chr2 122520730 122520848 -128167006 - MLT1-int LTR MaLR -233 1138 1023 239 141 155 42 chr2 122521801 122521872 -128165982 - MLT1-int LTR MaLR -1656 79 1 1750 116 78 0 chr2 122521922 122522190 -128165664 + AluSg SINE Alu 1 289 -21 225 286 64 53 chr2 122522233 122522404 -128165450 - MLT1H LTR MaLR -195 354 182 1526 175 38 7 chr2 122522496 122522788 -128165066 + AluJb SINE Alu 1 301 -11 841 166 51 0 chr2 122522896 122523053 -128164801 + FRAM SINE Alu 1 164 -12 596 196 6 17 chr2 122523086 122523259 -128164595 + CT-rich Low_complexity Low_complexity 2 172 0 207 156 0 0 chr2 122523272 122523304 -128164550 + CT-rich Low_complexity Low_complexity 1 32 0 1138 75 19 0 chr2 122523374 122523534 -128164320 + L1PA13 LINE L1 6001 6163 0 2211 219 79 41 chr2 122523582 122524340 -128163514 + L1ME LINE L1 1791 2577 -3963 399 205 60 17 chr2 122524332 122524449 -128163405 + L1ME LINE L1 5091 5212 -1328 * 874 186 83 36 chr2 122524460 122524486 -128163368 + MER58C DNA MER1_type 14 37 -2383 2426 101 2 99 chr2 122524486 122524901 -128162953 + THE1C LTR MaLR 1 375 0 874 186 83 36 chr2 122524901 122525067 -128162787 + MER58C DNA MER1_type 37 215 0 2174 201 43 21 chr2 122525067 122525686 -128162168 + L1ME LINE L1 5205 5834 -726 243 326 33 0 chr2 122525792 122525884 -128161970 + MIR SINE MIR 111 205 -57 1697 248 152 9 chr2 122526087 122526628 -128161226 + MLT2F LTR ERVL 5 622 -41 730 114 19 13 chr2 122526628 122526786 -128161068 + (TCTA)n Simple_repeat Simple_repeat 3 161 0 384 77 0 0 chr2 122526803 122526855 -128160999 + (TCCA)n Simple_repeat Simple_repeat 3 54 0 590 255 50 97 chr2 122527038 122527435 -128160419 - MLT1H LTR MaLR -14 395 40 504 256 200 26 chr2 122527481 122527676 -128160178 - MIR SINE MIR -26 236 8 385 298 117 27 chr2 122527812 122528243 -128159611 - L2 LINE L2 -213 3059 2575 973 197 49 0 chr2 122528262 122528445 -128159409 + MSTB LTR MaLR 211 402 -24 9099 173 36 14 chr2 122528489 122530100 -128157754 + MSTB-int LTR MaLR 1 1646 -5 2327 146 36 0 chr2 122530105 122530469 -128157385 + MSTB LTR MaLR 1 377 -49 461 265 110 86 chr2 122531065 122531772 -128156082 + L2 LINE L2 2448 3162 -151 327 177 0 0 chr2 122532788 122532850 -128155004 + (TG)n Simple_repeat Simple_repeat 2 63 0 231 297 94 29 chr2 122533155 122533293 -128154561 + L2 LINE L2 3123 3269 -3 2111 98 198 6 chr2 122533492 122533851 -128154003 - MSTA LTR MaLR 0 428 1 843 255 168 9 chr2 122533940 122534285 -128153569 + L2 LINE L2 2061 2460 -854 2084 186 80 40 chr2 122534297 122534748 -128153106 + MLT2B1 LTR ERVL 12 480 -40 855 120 13 76 chr2 122534748 122534906 -128152948 - Tigger7 DNA MER2_type -1 2586 2439 * 1783 236 3 3 chr2 122534901 122535245 -128152609 - Tigger7 DNA MER2_type -389 344 1 367 352 188 8 chr2 122535288 122535660 -128152194 + L2 LINE L2 2459 2897 -417 2530 205 107 5 chr2 122535664 122536299 -128151555 - L1MC4a LINE L1 0 7808 7109 1882 224 40 6 chr2 122536312 122536808 -128151046 + L1MB5 LINE L1 817 1329 -5213 3637 191 140 30 chr2 122537221 122538220 -128149634 + L1MB5 LINE L1 1274 2400 -4246 2033 122 3 0 chr2 122538220 122538514 -128149340 + AluSp SINE Alu 1 295 -18 3637 191 140 30 chr2 122538514 122538585 -128149269 + L1MB5 LINE L1 2400 2462 -4184 1445 172 0 39 chr2 122538600 122538879 -128148975 + AluJo SINE Alu 43 310 -2 244 185 0 0 chr2 122538880 122538934 -128148920 + L1MC4 LINE L1 6650 6703 -1339 227 73 0 0 chr2 122538958 122538999 -128148855 + LTR66 LTR ERVL 398 438 -172 3577 226 46 32 chr2 122539009 122540252 -128147602 + L1MB5 LINE L1 2529 3788 -2856 4452 174 36 75 chr2 122540266 122540937 -128146917 + L1MB5 LINE L1 5121 5817 -855 1784 163 10 0 chr2 122540937 122541243 -128146611 - AluJb SINE Alu 0 312 4 4452 174 36 75 chr2 122541243 122542139 -128145715 + L1MB5 LINE L1 5817 6671 -1 223 299 93 19 chr2 122542140 122542247 -128145607 + MER5B DNA MER1_type 56 170 -8 520 290 35 0 chr2 122542537 122542682 -128145172 - MIR SINE MIR -52 210 61 219 265 0 0 chr2 122542825 122542874 -128144980 - MIR SINE MIR -82 126 78 1654 176 21 0 chr2 122542966 122543255 -128144599 + AluJo SINE Alu 1 295 -17 305 186 39 31 chr2 122543313 122543442 -128144412 + (TTATA)n Simple_repeat Simple_repeat 4 133 0 2103 234 132 21 chr2 122543646 122544325 -128143529 - MER97c DNA MER1_type? -191 862 86 2072 69 3 96 chr2 122544325 122544658 -128143196 - AluSx SINE Alu -10 302 1 2103 234 132 21 chr2 122544658 122544745 -128143109 - MER97c DNA MER1_type? -967 86 10 232 235 53 131 chr2 122545838 122546018 -128141836 - MIR3 SINE MIR -41 167 2 181 320 80 0 chr2 122546386 122546436 -128141418 - L2 LINE L2 -58 3214 3161 832 270 87 36 chr2 122546490 122546879 -128140975 + L1MC4 LINE L1 7602 8010 -32 1687 131 0 93 chr2 122546879 122547223 -128140631 - AluJb SINE Alu 0 312 1 995 222 75 148 chr2 122548254 122548480 -128139374 + L1MC4 LINE L1 6818 7059 -983 1233 172 14 0 chr2 122548480 122548695 -128139159 + MER20 DNA MER1_type 1 218 -1 995 222 75 148 chr2 122548695 122548822 -128139032 + L1MC4 LINE L1 7059 7194 -848 2024 82 0 0 chr2 122548822 122549078 -128138776 + AluSq SINE Alu 5 260 -53 995 222 75 148 chr2 122549078 122549453 -128138401 + L1MC4 LINE L1 7194 7494 -548 960 248 30 14 chr2 122549515 122549810 -128138044 + AluJo SINE Alu 2 301 -1 1155 174 24 0 chr2 122549950 122550163 -128137691 + MER20 DNA MER1_type 1 218 -1 2024 82 0 0 chr2 122550290 122550546 -128137308 + AluSq SINE Alu 5 260 -53 1470 259 82 54 chr2 122550590 122550987 -128136867 + L1MC4 LINE L1 7141 7570 -472 1819 156 3 10 chr2 122550987 122551301 -128136553 + AluJb SINE Alu 1 312 0 1470 259 82 54 chr2 122551301 122551644 -128136210 + L1MC4 LINE L1 7570 7902 -140 448 226 0 15 chr2 122551650 122551787 -128136067 + (TG)n Simple_repeat Simple_repeat 2 136 0 2076 188 72 28 chr2 122551792 122552249 -128135605 + MLT1D LTR MaLR 28 504 -1 276 30 0 0 chr2 122552250 122552262 -128135592 + (TG)n Simple_repeat Simple_repeat 1 45 0 276 30 0 0 chr2 122552262 122552295 -128135559 + (TG)n Simple_repeat Simple_repeat 2 34 0 258 262 64 0 chr2 122552339 122552480 -128135374 + (TATATG)n Simple_repeat Simple_repeat 5 154 0 302 313 94 0 chr2 122552545 122552705 -128135149 + (TATATG)n Simple_repeat Simple_repeat 5 179 0 207 0 0 0 chr2 122552728 122552751 -128135103 + (TG)n Simple_repeat Simple_repeat 2 24 0 2988 215 23 32 chr2 122552816 122553468 -128134386 - MER82 DNA MER2_type -1 652 7 385 228 96 0 chr2 122553469 122553605 -128134249 + L1MC4 LINE L1 7904 7995 0 2635 26 0 0 chr2 122553991 122554297 -128133557 - AluY SINE Alu -5 306 1 429 320 55 11 chr2 122554422 122554603 -128133251 + L2 LINE L2 2288 2476 -838 192 77 0 0 chr2 122554616 122554642 -128133212 + (TGG)n Simple_repeat Simple_repeat 3 28 0 373 310 28 14 chr2 122554676 122554821 -128133033 - L1ME3 LINE L1 -13 6149 6003 1443 246 15 73 chr2 122554825 122554971 -128132883 - L1M4 LINE L1 -2295 3851 3698 1647 211 94 40 chr2 122554971 122555450 -128132404 + MLT1D LTR MaLR 1 505 0 1443 246 15 73 chr2 122555450 122555904 -128131950 - L1M4 LINE L1 -2448 3698 3286 587 259 107 42 chr2 122555913 122556176 -128131678 - L1M4 LINE L1 -3193 2953 2674 575 286 7 26 chr2 122556176 122556330 -128131524 + MIR SINE MIR 41 191 -71 446 308 19 6 chr2 122556758 122556917 -128130937 + L1M4 LINE L1 3441 3601 -2545 415 200 8 80 chr2 122557114 122557239 -128130615 - HAL1b LINE L1 -890 458 343 1329 161 0 52 chr2 122557273 122557522 -128130332 - MER46A DNA MER2_type 0 236 1 487 239 108 50 chr2 122557635 122557857 -128129997 - L2 LINE L2 -1 3312 3078 280 277 29 66 chr2 122560816 122560953 -128126901 + L3 LINE CR1 1432 1563 -14 441 286 72 21 chr2 122561109 122561263 -128126591 - MIR SINE MIR -62 146 35 1429 181 35 56 chr2 122562002 122562340 -128125514 - MLT1A1 LTR MaLR -34 331 1 275 123 246 0 chr2 122562340 122562397 -128125457 - MLT1C LTR MaLR -385 82 12 294 246 0 0 chr2 122562750 122562812 -128125042 + LTR16A1 LTR ERVL 377 438 -19 229 97 0 0 chr2 122562812 122562843 -128125011 + MER53 DNA DNA 1 31 -158 21 0 0 0 chr2 122562856 122562877 -128124977 + AT_rich Low_complexity Low_complexity 1 21 0 787 136 25 19 chr2 122562877 122563039 -128124815 - MER53 DNA DNA -8 181 19 235 225 50 25 chr2 122563131 122563211 -128124643 - MLT1L LTR MaLR -415 200 119 2611 224 86 5 chr2 122563318 122563698 -128124156 + MER82 DNA MER2_type 1 447 -206 387 0 0 0 chr2 122563698 122563741 -128124113 + (CA)n Simple_repeat Simple_repeat 2 44 0 2611 224 86 5 chr2 122563741 122563950 -128123904 + MER82 DNA MER2_type 447 638 -15 1671 166 3 3 chr2 122564890 122565186 -128122668 - AluJo SINE Alu -16 296 1 358 263 46 7 chr2 122565201 122565353 -128122501 - HAL1 LINE L1 -125 2382 2225 590 281 106 43 chr2 122565400 122565892 -128121962 + L2 LINE L2 2763 3271 -1 1901 134 7 3 chr2 122567852 122568135 -128119719 - AluSx SINE Alu -26 286 3 767 71 10 0 chr2 122568429 122568527 -128119327 - HY3 scRNA scRNA -2 99 1 2345 95 0 0 chr2 122568569 122568873 -128118981 + AluSx SINE Alu 1 304 -8 1778 251 107 0 chr2 122568877 122569364 -128118490 + L1MC4 LINE L1 7310 7848 -194 507 222 16 0 chr2 122569380 122569506 -128118348 + L1MC4 LINE L1 7914 8041 -1 378 284 232 14 chr2 122569524 122569735 -128118119 + L2 LINE L2 3015 3271 -1 272 279 48 75 chr2 122571079 122571151 -128116703 + MER91B DNA MER1_type 20 88 -102 1733 168 53 85 chr2 122571151 122571550 -128116304 + MLT1B LTR MaLR 5 390 0 272 279 48 75 chr2 122571550 122571624 -128116230 + MER91B DNA MER1_type 88 162 -28 225 195 0 0 chr2 122571775 122571816 -128116038 - MER91B DNA MER1_type -150 46 6 647 278 106 51 chr2 122574397 122574964 -128112890 - L2 LINE L2 0 3313 2726 910 164 42 0 chr2 122575036 122575201 -128112653 - MER20 DNA MER1_type -47 172 1 285 329 32 32 chr2 122575208 122575363 -128112491 - L2 LINE L2 -655 2659 2505 559 255 33 32 chr2 122575519 122575733 -128112121 - MLT2D LTR ERVL -123 291 77 2220 126 16 65 chr2 122575754 122576125 -128111729 - L1M3 LINE L1 -498 5682 5334 2097 109 0 0 chr2 122576125 122576433 -128111421 - AluSx SINE Alu 0 308 1 2220 126 16 65 chr2 122576433 122576503 -128111351 - L1M3 LINE L1 -846 5334 5262 627 167 0 0 chr2 122576614 122576752 -128111102 + (CA)n Simple_repeat Simple_repeat 2 139 0 783 291 119 48 chr2 122576752 122577299 -128110555 - MLT2F LTR ERVL -58 605 20 419 266 0 104 chr2 122579332 122579505 -128108349 - MIR SINE MIR -27 235 81 473 232 16 32 chr2 122581402 122581527 -128106327 - MIR SINE MIR -15 247 125 275 269 130 0 chr2 122582101 122582209 -128105645 + L1MC4 LINE L1 7921 8042 0 378 303 114 11 chr2 122582239 122582414 -128105440 - MLT1K LTR MaLR -61 527 335 4372 129 20 35 chr2 122582748 122582901 -128104953 + L1MC1 LINE L1 5186 5340 -993 590 256 0 24 chr2 122582901 122583026 -128104828 + FLAM_A SINE Alu 1 122 -11 4372 129 20 35 chr2 122583026 122583733 -128104121 + L1MC1 LINE L1 5340 6035 -298 1998 146 96 24 chr2 122583733 122584151 -128103703 + LTR45B LTR ERV1 2 449 -40 1594 151 43 11 chr2 122584162 122584173 -128103681 + L1MC1 LINE L1 6039 6048 -285 2174 78 34 3 chr2 122584173 122584469 -128103385 - AluY SINE Alu -6 305 1 1594 151 43 11 chr2 122584469 122584736 -128103118 + L1MC1 LINE L1 6048 6326 -7 2150 95 10 0 chr2 122584736 122585030 -128102824 + AluSp SINE Alu 1 297 -16 344 244 13 13 chr2 122585031 122585109 -128102745 + L1MC4 LINE L1 6626 6703 -1339 * 345 378 28 6 chr2 122585093 122585273 -128102581 + L1M4 LINE L1 3458 3641 -2505 356 282 50 35 chr2 122585371 122585690 -128102164 + L1M4 LINE L1 4430 4753 -1393 1105 191 10 0 chr2 122585698 122585897 -128101957 + AluJb SINE Alu 1 201 -111 203 266 71 97 chr2 122586333 122586487 -128101367 + MIR3 SINE MIR 5 154 -54 315 250 14 0 chr2 122586540 122586612 -128101242 - MIR SINE MIR -71 191 119 2243 92 0 0 chr2 122587276 122587569 -128100285 + AluSx SINE Alu 1 293 -19 1254 154 85 31 chr2 122587745 122588005 -128099849 + AluJo SINE Alu 17 290 -22 201 74 0 0 chr2 122588079 122588106 -128099748 + (GAAAA)n Simple_repeat Simple_repeat 1 27 0 776 319 78 23 chr2 122588712 122589147 -128098707 + L2 LINE L2 2855 3313 0 311 299 47 0 chr2 122589433 122589540 -128098314 + MIR SINE MIR 36 147 -61 208 188 3 74 chr2 122590050 122590138 -128097716 + L2 LINE L2 2912 2995 -318 918 148 0 0 chr2 122590271 122590533 -128097321 + (CA)n Simple_repeat Simple_repeat 1 262 0 258 306 112 53 chr2 122590809 122591185 -128096669 + L2 LINE L2 2868 3265 -7 25 0 0 0 chr2 122591666 122591691 -128096163 + GC_rich Low_complexity Low_complexity 1 25 0 579 282 104 44 chr2 122592444 122592830 -128095024 - L2 LINE L2 -917 2397 1989 243 271 65 19 chr2 122592890 122592997 -128094857 - L2 LINE L2 -1890 1424 1313 216 299 77 34 chr2 122593360 122593477 -128094377 + MIR3 SINE MIR 76 197 -11 336 319 31 49 chr2 122594117 122594280 -128093574 + L3 LINE CR1 586 745 -832 255 344 49 8 chr2 122594384 122594506 -128093348 + MIR SINE MIR 24 150 -58 265 375 42 0 chr2 122595379 122595475 -128092379 + L2 LINE L2 3212 3311 -2 224 277 15 0 chr2 122595597 122595662 -128092192 - MIR SINE MIR -80 182 117 833 250 161 4 chr2 122595715 122595995 -128091859 + MER33 DNA MER1_type 1 324 0 522 275 26 58 chr2 122597174 122597252 -128090602 - MIR SINE MIR -1 261 182 2172 122 0 0 chr2 122597252 122597564 -128090290 + AluSx SINE Alu 1 312 0 522 275 26 58 chr2 122597564 122597674 -128090180 - MIR SINE MIR -80 182 79 839 135 0 0 chr2 122598054 122598180 -128089674 + FLAM_C SINE Alu 1 126 -17 263 305 35 14 chr2 122598534 122598675 -128089179 - L2 LINE L2 -214 3058 2915 683 257 65 46 chr2 122598796 122599057 -128088797 + L2 LINE L2 3047 3312 -1 183 252 112 9 chr2 122599418 122599525 -128088329 - MIR SINE MIR -72 136 19 300 342 53 20 chr2 122599761 122599913 -128087941 + MIR SINE MIR 105 261 -1 337 249 22 50 chr2 122600173 122600354 -128087500 + (CAGAGA)n Simple_repeat Simple_repeat 3 178 0 1193 184 14 9 chr2 122602022 122602239 -128085615 + AluJb SINE Alu 1 218 -94 247 128 0 0 chr2 122602239 122602278 -128085576 + THE1C-int LTR MaLR 1542 1580 0 2384 120 27 14 chr2 122602280 122602648 -128085206 + THE1C LTR MaLR 3 375 0 2471 202 92 20 chr2 122602843 122603552 -128084302 - L1MDa LINE L1 -4779 1761 1002 1663 238 93 4 chr2 122603551 122604022 -128083832 - L1MDa LINE L1 -5979 561 49 * 381 310 28 14 chr2 122604701 122604843 -128083011 + MIR SINE MIR 40 183 -79 1921 118 0 4 chr2 122605034 122605305 -128082549 - AluSx SINE Alu -42 270 1 297 216 114 11 chr2 122605318 122605406 -128082448 - MIR SINE MIR -138 124 28 1637 111 0 0 chr2 122605577 122605803 -128082051 + AluSg/x SINE Alu 85 310 -2 1273 181 40 53 chr2 122606360 122606663 -128081191 + AluJo SINE Alu 1 299 -13 2516 55 0 3 chr2 122607018 122607326 -128080528 - AluY SINE Alu -4 307 1 415 252 0 58 chr2 122607369 122607508 -128080346 - MIR3 SINE MIR -75 133 3 321 271 31 31 chr2 122608278 122608374 -128079480 - MIR SINE MIR -111 151 56 264 209 245 43 chr2 122609607 122609770 -128078084 + ORSL DNA AcHobo 9 204 -71 2038 128 0 0 chr2 122609771 122610075 -128077779 + AluSg SINE Alu 1 304 -6 2231 205 157 30 chr2 122611587 122611758 -128076096 - MER50 LTR ERV1 0 734 586 2031 122 3 7 chr2 122611758 122612061 -128075793 + AluSq SINE Alu 1 302 -11 2231 205 157 30 chr2 122612061 122612532 -128075322 - MER50 LTR ERV1 -148 586 10 1847 139 0 24 chr2 122612865 122613185 -128074669 + AluJb SINE Alu 1 313 0 1265 176 34 22 chr2 122613466 122613733 -128074121 + AluJo SINE Alu 13 282 -30 302 203 68 0 chr2 122613749 122613808 -128074046 + HAL1b LINE L1 624 686 -662 1609 129 61 27 chr2 122613820 122614114 -128073740 + AluJb SINE Alu 9 312 0 1079 283 74 69 chr2 122614156 122614619 -128073235 + MER77 LTR ERV1 22 480 -166 2264 97 0 7 chr2 122614619 122614917 -128072937 + AluSg SINE Alu 2 297 -13 1079 283 74 69 chr2 122614917 122615075 -128072779 + MER77 LTR ERV1 480 636 -10 1603 264 66 94 chr2 122615169 122616267 -128071587 + L1MC4 LINE L1 299 1365 -5051 1091 233 0 12 chr2 122616516 122616774 -128071080 + AluSg SINE Alu 1 255 -55 1662 315 40 16 chr2 122616883 122617603 -128070251 - L1MC4 LINE L1 -295 7747 6957 834 240 115 7 chr2 122617605 122617884 -128069970 - L1MC4 LINE L1 -1274 6768 6460 2239 46 6 70 chr2 122618076 122618403 -128069451 - AluY SINE Alu -5 306 1 2428 79 0 10 chr2 122618668 122618971 -128068883 - AluSc SINE Alu -9 300 1 361 286 42 8 chr2 122619412 122619531 -128068323 - MER58B DNA MER1_type -13 328 206 378 260 87 38 chr2 122619830 122620067 -128067787 - L1MC5 LINE L1 -202 7759 6588 434 234 30 84 chr2 122619897 122620044 -128067810 + L1MC4 LINE L1 1958 6985 -1337 373 249 49 66 chr2 122620020 122620493 -128067361 + L1MC4 LINE L1 1978 6928 -155 * 386 225 36 40 chr2 122620388 122620501 -128067353 - L1MC4 LINE L1 -1337 6985 6873 2207 112 7 0 chr2 122620501 122620788 -128067066 - AluSx SINE Alu -23 289 1 386 225 36 40 chr2 122620788 122620820 -128067034 - L1MC4 LINE L1 -1449 6873 1963 306 211 21 21 chr2 122620825 122620920 -128066934 - L1MC5 LINE L1 -50 7911 7817 1983 112 76 22 chr2 122621166 122621522 -128066332 + THE1C LTR MaLR 1 375 0 1323 147 0 5 chr2 122621641 122621831 -128066023 + AluSg SINE Alu 1 189 -121 216 316 0 0 chr2 122622582 122622639 -128065215 - L3 LINE CR1 -5 1572 1516 231 65 65 0 chr2 122624063 122624109 -128063745 + GA-rich Low_complexity Low_complexity 1 49 0 317 309 105 0 chr2 122624253 122624405 -128063449 + MIR SINE MIR 81 248 -14 330 325 63 8 chr2 122625281 122625407 -128062447 - MIR SINE MIR -124 138 6 351 274 45 9 chr2 122626025 122626176 -128061678 - MIR SINE MIR -62 146 40 2124 169 85 38 chr2 122626260 122626376 -128061478 - MLT1D LTR MaLR -2 503 394 3289 147 5 30 chr2 122626376 122626884 -128060970 - MER41D LTR ERV1 0 557 63 2225 127 0 3 chr2 122626884 122627191 -128060663 - AluSx SINE Alu -6 306 1 3289 147 5 30 chr2 122627191 122627253 -128060601 - MER41D LTR ERV1 -494 63 1 2124 169 85 38 chr2 122627253 122627616 -128060238 - MLT1D LTR MaLR -111 394 1 519 214 15 15 chr2 122629573 122629704 -128058150 + AluJb SINE Alu 182 312 0 2153 114 7 0 chr2 122629829 122630110 -128057744 - AluSg SINE Alu -27 283 1 621 250 39 22 chr2 122630110 122630281 -128057573 - L2 LINE L2 -8 3305 3129 * 1050 287 36 13 chr2 122630248 122630638 -128057216 - L2 LINE L2 -692 2622 2224 2428 116 15 114 chr2 122630638 122631113 -128056741 - MSTA LTR MaLR 0 428 1 767 266 68 0 chr2 122631114 122631366 -128056488 - L2 LINE L2 -1087 2227 1959 382 230 101 78 chr2 122631758 122631910 -128055944 + ORSL DNA AcHobo 7 167 -108 2084 116 6 28 chr2 122631910 122632229 -128055625 - AluSx SINE Alu 0 312 1 382 230 101 78 chr2 122632229 122632293 -128055561 + ORSL DNA AcHobo 167 228 -47 676 165 0 0 chr2 122632423 122632532 -128055322 + FLAM_C SINE Alu 2 110 -33 525 344 89 18 chr2 122632616 122633177 -128054677 + L1MC4a LINE L1 5307 5907 -1901 2269 126 0 7 chr2 122633297 122633607 -128054247 - AluSx SINE Alu -4 308 1 1337 219 75 55 chr2 122634595 122634937 -128052917 + MLT1C LTR MaLR 6 361 -106 2135 143 31 14 chr2 122634937 122635295 -128052559 - THE1B LTR MaLR 0 364 1 1337 219 75 55 chr2 122635295 122635403 -128052451 + MLT1C LTR MaLR 361 465 -2 438 212 20 10 chr2 122635509 122635608 -128052246 + MER67A LTR ERV1 1 100 -443 352 167 15 0 chr2 122636538 122636604 -128051250 + MIR SINE MIR 82 148 -114 187 220 34 17 chr2 122636810 122636869 -128050985 - MIR SINE MIR -119 89 30 265 284 48 67 chr2 122636906 122637114 -128050740 + L1MC5 LINE L1 7710 7913 -48 267 54 0 0 chr2 122637207 122637244 -128050610 + (TG)n Simple_repeat Simple_repeat 2 38 0 238 194 87 29 chr2 122637280 122637383 -128050471 + L1ME4a LINE L1 5995 6103 -18 1908 162 0 25 chr2 122637383 122637698 -128050156 - AluJo SINE Alu 0 312 6 1799 151 7 0 chr2 122637737 122638015 -128049839 - AluJb SINE Alu -32 280 1 207 332 22 66 chr2 122638827 122639053 -128048801 + L2 LINE L2 2970 3185 -87 289 262 16 0 chr2 122639126 122639187 -128048667 - MER91A DNA MER1_type -134 62 1 249 33 0 0 chr2 122639234 122639264 -128048590 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 282 321 75 0 chr2 122639694 122639800 -128048054 - L2 LINE L2 -8 3264 3151 1657 145 9 110 chr2 122639987 122640435 -128047419 + AluJb SINE Alu 1 413 0 454 214 0 0 chr2 122640332 122640615 -128047239 + GA-rich Low_complexity Low_complexity 1 283 0 2403 74 10 0 chr2 122640696 122640995 -128046859 + AluY SINE Alu 1 302 -9 278 323 79 16 chr2 122640999 122641126 -128046728 + MIR SINE MIR 26 160 -102 625 264 20 12 chr2 122641328 122641553 -128046301 + L1MA10 LINE L1 5955 6334 0 195 277 134 25 chr2 122641721 122641840 -128046014 - L2 LINE L2 0 3313 3182 195 331 86 29 chr2 122642488 122642663 -128045191 + L2 LINE L2 2572 2756 -558 250 271 12 35 chr2 122643086 122643171 -128044683 + L2 LINE L2 3231 3313 0 269 304 96 9 chr2 122644051 122644166 -128043688 + MIR SINE MIR 56 180 -82 389 223 62 36 chr2 122645092 122645204 -128042650 - MER3 DNA MER1_type -94 115 1 603 206 0 0 chr2 122645792 122645947 -128041907 + (TG)n Simple_repeat Simple_repeat 2 156 0 1768 164 39 0 chr2 122646088 122646210 -128041644 + AluJb SINE Alu 1 117 -195 295 20 20 41 chr2 122646210 122646259 -128041595 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1768 164 39 0 chr2 122646259 122646416 -128041438 + AluJb SINE Alu 117 291 -21 229 284 255 0 chr2 122646485 122646587 -128041267 + MIR SINE MIR 135 262 0 382 260 0 0 chr2 122648475 122648571 -128039283 + MIR SINE MIR 50 145 -117 368 217 11 0 chr2 122648776 122648868 -128038986 + MER96 DNA MER1_type? 1 93 -82 192 313 50 10 chr2 122649028 122649127 -128038727 + L2 LINE L2 3150 3252 -20 263 219 104 52 chr2 122649226 122649322 -128038532 - L2 LINE L2 -31 3241 3141 222 167 25 31 chr2 122649322 122649484 -128038370 + (TG)n Simple_repeat Simple_repeat 1 161 0 591 134 46 6 chr2 122649512 122649816 -128038038 + (TG)n Simple_repeat Simple_repeat 1 316 0 680 110 35 18 chr2 122649833 122650062 -128037792 + (TG)n Simple_repeat Simple_repeat 1 233 0 479 250 32 39 chr2 122650519 122650675 -128037179 - MIR SINE MIR 0 262 108 291 374 37 0 chr2 122650730 122650837 -128037017 + MIR SINE MIR 76 186 -76 515 254 22 0 chr2 122650946 122651080 -128036774 - MIR SINE MIR -77 185 49 1088 216 39 30 chr2 122651118 122651342 -128036512 + MLT1A1 LTR MaLR 1 164 -201 2415 153 10 82 chr2 122651342 122651865 -128035989 - MER66B LTR ERV1 0 486 2 1088 216 39 30 chr2 122651865 122652069 -128035785 + MLT1A1 LTR MaLR 164 365 0 398 275 74 38 chr2 122652084 122652275 -128035579 + MIR SINE MIR 2 198 -62 303 259 75 55 chr2 122652297 122652498 -128035356 - MLT1J LTR MaLR -3 508 304 278 265 24 0 chr2 122653098 122653181 -128034673 - MIR SINE MIR -131 131 47 227 221 0 65 chr2 122653226 122653303 -128034551 - MIR3 SINE MIR -44 164 93 571 309 23 73 chr2 122653466 122653851 -128034003 + L2 LINE L2 2942 3307 -6 254 315 0 0 chr2 122654027 122654116 -128033738 - L1MC4 LINE L1 -1340 6702 6614 351 60 0 0 chr2 122654124 122654174 -128033680 + (GA)n Simple_repeat Simple_repeat 2 51 0 830 182 97 0 chr2 122654305 122654470 -128033384 + MER20 DNA MER1_type 36 216 -3 293 317 20 0 chr2 122654548 122654649 -128033205 - L2 LINE L2 -13 3259 3157 659 276 197 18 chr2 122654881 122655323 -128032531 + MLT1H LTR MaLR 13 533 -16 204 279 98 49 chr2 122655479 122655601 -128032253 - MIR SINE MIR -56 206 79 1707 246 44 48 chr2 122655699 122656243 -128031611 - MLT1H LTR MaLR -1 548 7 371 303 44 34 chr2 122656435 122656622 -128031232 + MIR SINE MIR 1 188 -54 233 287 58 11 chr2 122656779 122656866 -128030988 - MIR SINE MIR -170 92 2 2596 205 73 18 chr2 122656943 122657611 -128030243 + L1ME1 LINE L1 5460 6164 -2 2539 204 24 8 chr2 122658758 122659374 -128028480 - L1M4 LINE L1 -852 5294 4669 24 0 0 0 chr2 122659386 122659410 -128028444 + AT_rich Low_complexity Low_complexity 1 24 0 2705 224 46 49 chr2 122659685 122659823 -128028031 + L1MD2 LINE L1 4548 4685 -1557 1643 181 52 0 chr2 122659823 122660116 -128027738 - AluJb SINE Alu 0 307 1 2705 224 46 49 chr2 122660116 122660737 -128027117 + L1MD2 LINE L1 4685 5319 -923 2250 123 3 0 chr2 122660737 122661047 -128026807 + AluY SINE Alu 1 311 0 2705 224 46 49 chr2 122661047 122661586 -128026268 + L1MD2 LINE L1 5319 5858 -384 2053 145 16 52 chr2 122661586 122661723 -128026131 + MLT2D LTR ERVL 1 141 -273 2083 121 6 19 chr2 122661723 122662037 -128025817 + AluSq SINE Alu 1 310 -3 2053 145 16 52 chr2 122662037 122662285 -128025569 + MLT2D LTR ERVL 141 372 -42 269 262 0 0 chr2 122662289 122662350 -128025504 + (CATA)n Simple_repeat Simple_repeat 2 62 0 225 143 0 24 chr2 122662351 122662393 -128025461 + MLT2D LTR ERVL 367 407 -7 711 227 31 0 chr2 122662397 122662560 -128025294 + L1MD2 LINE L1 5855 6022 -337 1049 231 64 0 chr2 122662571 122662853 -128025001 + L1MD2 LINE L1 6056 6355 -4 228 319 45 51 chr2 122663916 122664165 -128023689 - MIR SINE MIR -14 248 4 199 298 71 0 chr2 122664271 122664355 -128023499 + L2 LINE L2 2990 3079 -193 215 200 0 18 chr2 122664574 122664629 -128023225 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 1809 167 6 13 chr2 122664799 122665111 -128022743 + AluJb SINE Alu 1 310 -2 288 77 0 0 chr2 122665132 122665171 -128022683 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 731 125 10 0 chr2 122715261 122715365 -127972489 - AluSq/x SINE Alu -207 105 1 1243 172 10 0 chr2 122715368 122715577 -127972277 - AluJb SINE Alu -19 293 83 259 294 68 37 chr2 122715577 122715740 -127972114 + L1MDa LINE L1 2116 2283 -4257 387 207 0 133 chr2 122715755 122715844 -127972010 - L1M4 LINE L1 -3318 2828 2761 1910 116 7 30 chr2 122715844 122716146 -127971708 + AluSx SINE Alu 1 295 -17 387 207 0 133 chr2 122716146 122716191 -127971663 - L1M4 LINE L1 -3385 2761 2712 440 231 210 52 chr2 122716207 122716314 -127971540 + L1M4 LINE L1 4060 4149 -1997 1451 174 72 0 chr2 122716314 122716590 -127971264 + AluJb SINE Alu 1 296 -16 440 231 210 52 chr2 122716590 122716711 -127971143 + L1M4 LINE L1 4149 4324 -1822 398 237 113 0 chr2 122716781 122716878 -127970976 - FRAM SINE Alu -5 161 54 642 167 10 0 chr2 122716999 122717095 -127970759 - AluJ/FLAM SINE Alu -214 98 2 2281 90 3 0 chr2 122717281 122717581 -127970273 - AluSx SINE Alu -11 301 1 298 205 13 64 chr2 122718118 122718196 -127969658 - Tigger2a DNA MER2_type 0 444 371 226 200 127 0 chr2 122718790 122718845 -127969009 - MLT1L LTR MaLR -516 99 38 220 109 18 18 chr2 122719525 122719580 -127968274 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 246 299 67 8 chr2 122719842 122719976 -127967878 - L1ME3A LINE L1 -221 5949 5808 2255 70 35 3 chr2 122720026 122720312 -127967542 - AluY SINE Alu -16 295 1 2001 148 8 77 chr2 122720401 122720639 -127967215 - MER47A DNA MER2_type -1957 366 162 1867 113 56 0 chr2 122720639 122720905 -127966949 - AluSx SINE Alu -31 281 1 2001 148 8 77 chr2 122720905 122721044 -127966810 - MER47A DNA MER2_type -2161 162 15 721 277 82 20 chr2 122721065 122721455 -127966399 - L1ME3A LINE L1 -520 5644 5210 267 31 0 0 chr2 122721591 122721623 -127966231 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 459 0 0 0 chr2 122721625 122721676 -127966178 + (TTTCC)n Simple_repeat Simple_repeat 4 54 0 307 226 0 0 chr2 122721776 122721838 -127966016 - L1MB8 LINE L1 -84 6094 6033 985 285 97 50 chr2 122722026 122722048 -127965806 + ERVL LTR ERVL 3247 3267 -2497 2225 115 7 3 chr2 122722048 122722352 -127965502 - AluSg SINE Alu -5 305 1 985 285 97 50 chr2 122722352 122722735 -127965119 + ERVL LTR ERVL 3267 3631 -2133 1696 141 47 34 chr2 122722735 122723033 -127964821 + AluJb SINE Alu 1 302 -10 2247 114 0 13 chr2 122723035 122723341 -127964513 + AluSx SINE Alu 2 303 -9 985 285 97 50 chr2 122723341 122723949 -127963905 + ERVL LTR ERVL 3631 4413 -1351 1110 62 0 0 chr2 122723956 122724086 -127963768 + AluSq/x SINE Alu 1 130 -183 271 216 45 11 chr2 122724159 122724247 -127963607 + MLT1E1 LTR MaLR 6 96 -558 * 1444 175 14 169 chr2 122724235 122724347 -127963507 + MLT1E1 LTR MaLR 221 349 -305 1558 201 45 17 chr2 122724347 122724700 -127963154 + MLT1A1 LTR MaLR 1 363 -2 1444 175 14 169 chr2 122724700 122724933 -127962921 + MLT1E1 LTR MaLR 349 466 -188 2296 107 10 0 chr2 122724933 122725241 -127962613 - AluSq SINE Alu -2 311 1 1444 175 14 169 chr2 122725241 122725397 -127962457 + MLT1E1 LTR MaLR 466 645 -9 505 163 0 0 chr2 122725471 122725551 -127962303 + AluJ/FLAM SINE Alu 1 80 -232 341 113 0 0 chr2 122725651 122725704 -127962150 + Alu SINE Alu 242 294 -8 1899 106 74 80 chr2 122726151 122726381 -127961473 - THE1C LTR MaLR 0 375 146 2198 85 3 41 chr2 122726381 122726699 -127961155 + AluSq SINE Alu 5 310 -3 1899 106 74 80 chr2 122726699 122726845 -127961009 - THE1C LTR MaLR -229 146 1 1226 182 17 17 chr2 122726856 122727059 -127960795 - MLT1B LTR MaLR 0 390 188 1031 191 58 35 chr2 122727059 122727258 -127960596 - MSTD LTR MaLR 0 396 203 1840 166 20 10 chr2 122727258 122727560 -127960294 - AluJo SINE Alu -7 305 1 1031 191 58 35 chr2 122727560 122727634 -127960220 - MSTD LTR MaLR -193 203 132 1839 188 0 3 chr2 122727634 122727938 -127959916 + AluSx SINE Alu 1 303 -9 2173 100 3 13 chr2 122727939 122728276 -127959578 + AluSc SINE Alu 2 309 0 1031 191 58 35 chr2 122728276 122728301 -127959553 - MSTD LTR MaLR -263 133 49 3968 91 13 0 chr2 122728441 122728990 -127958864 - L1PA11 LINE L1 -2 6172 5617 1659 139 0 4 chr2 122729123 122729361 -127958493 + AluJb SINE Alu 64 300 -12 1098 311 113 40 chr2 122729385 122729917 -127957937 - HERVL LTR ERVL -3120 2534 2042 1288 180 92 32 chr2 122729917 122730201 -127957653 + AluJo SINE Alu 1 301 -11 1098 311 113 40 chr2 122730201 122730598 -127957256 - HERVL LTR ERVL -3612 2042 1537 1885 179 7 0 chr2 122730672 122730980 -127956874 - AluJb SINE Alu -2 310 1 434 276 17 0 chr2 122730983 122731099 -127956755 - L2 LINE L2 -776 2538 2421 1380 153 81 8 chr2 122731113 122731361 -127956493 + Tigger2a DNA MER2_type 4 269 -165 389 148 55 0 chr2 122731363 122731491 -127956363 + (TA)n Simple_repeat Simple_repeat 1 135 0 691 174 6 96 chr2 122731491 122731538 -127956316 + Tigger2a DNA MER2_type 254 304 -2404 2645 34 0 3 chr2 122731538 122731835 -127956019 - AluY SINE Alu -15 296 1 691 174 6 96 chr2 122731835 122731929 -127955925 + Tigger2a DNA MER2_type 304 379 -55 337 172 0 16 chr2 122731929 122731993 -127955861 + AluS SINE Alu 1 63 -245 334 182 0 0 chr2 122732143 122732198 -127955656 - FRAM/FAM SINE Alu -107 59 5 215 310 0 0 chr2 122732746 122732817 -127955037 + T-rich Low_complexity Low_complexity 1 71 0 2134 123 0 3 chr2 122735762 122736055 -127951799 - AluSx SINE Alu -20 292 1 2416 92 7 0 chr2 122736068 122736374 -127951480 - AluSx SINE Alu -4 308 1 2832 25 0 3 chr2 122736442 122736759 -127951095 + AluYb8 SINE Alu 1 316 -2 28 0 0 0 chr2 122736799 122736827 -127951027 + AT_rich Low_complexity Low_complexity 1 28 0 887 259 116 48 chr2 122736986 122737429 -127950425 - L1ME4a LINE L1 -219 5902 5410 663 206 0 8 chr2 122737429 122737560 -127950294 - FLAM_A SINE Alu -3 130 1 887 259 116 48 chr2 122737560 122737683 -127950171 - L1ME4a LINE L1 -711 5410 5297 1801 150 0 11 chr2 122738113 122738400 -127949454 - AluJb SINE Alu 0 312 29 2209 69 10 0 chr2 122738419 122738709 -127949145 + L1PA7 LINE L1 5861 6153 -1 2314 110 0 0 chr2 122738910 122739210 -127948644 + AluSx SINE Alu 3 302 -10 310 267 23 12 chr2 122739542 122739628 -127948226 + MLT1J LTR MaLR 223 309 -202 2338 92 7 0 chr2 122739630 122739933 -127947921 - AluSp SINE Alu -8 305 1 1152 194 76 98 chr2 122739955 122740351 -127947503 + MLT1B LTR MaLR 4 390 0 1430 182 69 3 chr2 122740421 122740712 -127947142 + L1M4 LINE L1 2512 2821 -3325 976 142 0 0 chr2 122740712 122740853 -127947001 + AluJo SINE Alu 1 141 -171 26 0 0 0 chr2 122740870 122740896 -127946958 + AT_rich Low_complexity Low_complexity 1 26 0 490 208 52 46 chr2 122740896 122741069 -127946785 + L1M4 LINE L1 2800 2973 -3173 1698 182 3 17 chr2 122741072 122741363 -127946491 + AluJo SINE Alu 1 287 -25 230 315 18 27 chr2 122741393 122741504 -127946350 + L1M3e LINE L1 -723 4294966682 -6920 610 217 0 0 chr2 122741908 122742014 -127945840 + FAM SINE Alu 10 115 -70 4231 233 40 32 chr2 122742023 122743429 -127944425 + L1M3e LINE L1 778 2212 -4170 1827 71 4 55 chr2 122743530 122743784 -127944070 - AluY SINE Alu -70 241 1 1662 160 42 10 chr2 122743930 122744218 -127943636 - AluJo SINE Alu -15 297 1 1649 156 45 7 chr2 122744244 122744579 -127943275 - Tigger4(Zombi) DNA MER2_type -6 2725 1 191 281 0 35 chr2 122744579 122744636 -127943218 + L2 LINE L2 3203 3257 -15 2069 89 0 4 chr2 122744766 122745037 -127942817 - AluSx SINE Alu -4 308 39 527 271 48 6 chr2 122746014 122746180 -127941674 + MIR SINE MIR 90 262 0 189 343 111 19 chr2 122747065 122747173 -127940681 + MIR SINE MIR 33 150 -112 2389 109 0 0 chr2 122747665 122747977 -127939877 - AluSx SINE Alu 0 312 1 832 205 0 7 chr2 122748012 122748163 -127939691 - AluJo SINE Alu -16 286 137 357 255 154 63 chr2 122748165 122748566 -127939288 - L1MC4a LINE L1 -293 5828 5465 262 186 186 0 chr2 122748573 122748643 -127939211 + L2 LINE L2 3195 3277 -36 2087 121 14 0 chr2 122748965 122749254 -127938600 - AluSx SINE Alu -19 293 1 607 200 15 15 chr2 122749275 122749405 -127938449 - AluJo SINE Alu -181 131 2 641 171 27 34 chr2 122749418 122749564 -127938290 - AluJb SINE Alu -9 303 159 234 0 0 0 chr2 122749697 122749723 -127938131 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1990 129 31 3 chr2 122749752 122750039 -127937815 - AluSq SINE Alu -18 295 1 1028 301 114 12 chr2 122750039 122750218 -127937636 - L1MEc LINE L1 -4582 1814 1655 2271 92 3 0 chr2 122750218 122750501 -127937353 - AluSp SINE Alu -29 284 1 1028 301 114 12 chr2 122750501 122751066 -127936788 - L1MEc LINE L1 -4741 1655 994 * 8392 212 42 20 chr2 122751052 122751583 -127936271 - L1 LINE L1 -963 5419 4902 2350 116 0 0 chr2 122751583 122751885 -127935969 - AluSx SINE Alu -10 302 1 8392 212 42 20 chr2 122751885 122753159 -127934695 - L1 LINE L1 -1480 4902 3553 2158 131 3 0 chr2 122753159 122753457 -127934397 - AluSx SINE Alu -13 299 1 8392 212 42 20 chr2 122753457 122753842 -127934012 - L1 LINE L1 -2829 3553 3178 279 0 0 0 chr2 122754199 122754230 -127933624 + (CA)n Simple_repeat Simple_repeat 1 31 0 1185 205 0 0 chr2 122754478 122754727 -127933127 - L1 LINE L1 -3193 3189 2941 895 118 0 32 chr2 122754727 122754913 -127932941 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 400 212 9 9 chr2 122754929 122755042 -127932812 + CT-rich Low_complexity Low_complexity 3 115 0 1727 166 7 30 chr2 122755044 122755346 -127932508 - AluJb SINE Alu -17 295 1 1713 220 71 9 chr2 122755348 122756031 -127931823 - L1 LINE L1 -3444 2938 2201 21 0 0 0 chr2 122756286 122756307 -127931547 + AT_rich Low_complexity Low_complexity 1 21 0 264 288 88 8 chr2 122756405 122756530 -127931324 + L1MC/D LINE L1 5744 5878 -1930 1028 119 13 19 chr2 122756793 122756952 -127930902 + AluJb SINE Alu 122 279 -33 189 0 0 0 chr2 122756955 122756976 -127930878 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 22 35 0 0 chr2 122757000 122757029 -127930825 + AT_rich Low_complexity Low_complexity 1 29 0 547 197 0 33 chr2 122757187 122757309 -127930545 - AluJo SINE Alu -3 309 192 567 178 195 0 chr2 122757311 122757429 -127930425 - AluJo SINE Alu -169 143 3 2305 95 0 7 chr2 122757534 122757830 -127930024 + AluSx SINE Alu 1 294 -18 625 230 8 0 chr2 122757980 122758106 -127929748 + FLAM_A SINE Alu 1 127 -6 1906 138 3 21 chr2 122758112 122758459 -127929395 + AluSx SINE Alu 1 342 0 1834 153 0 0 chr2 122759190 122759464 -127928390 + AluJb SINE Alu 27 300 -12 2276 114 0 0 chr2 122759546 122759843 -127928011 + AluSx SINE Alu 1 297 -15 3094 170 60 6 chr2 122759843 122760489 -127927365 - L1MB8 LINE L1 -10 6168 5488 433 307 54 63 chr2 122761595 122761911 -127925943 - L1MC/D LINE L1 -2196 5612 5300 322 219 14 0 chr2 122761934 122762007 -127925847 - MER116 DNA Mariner 0 80 7 2224 96 4 4 chr2 122762091 122762372 -127925482 + AluSp SINE Alu 1 281 -32 207 0 0 0 chr2 122762375 122762398 -127925456 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1055 235 86 3 chr2 122762528 122762830 -127925024 - L1MD3 LINE L1 -23 7972 7646 2245 85 3 0 chr2 122762831 122763142 -127924712 - AluSg SINE Alu 0 312 1 21 57 0 0 chr2 122763142 122763177 -127924677 + AT_rich Low_complexity Low_complexity 1 35 0 707 174 9 0 chr2 122763177 122763292 -127924562 - FLAM_C SINE Alu -26 117 2 2688 226 45 18 chr2 122763302 122764013 -127923841 - L1MC4a LINE L1 -347 7461 6732 184 289 205 0 chr2 122764911 122764994 -127922860 - MIR SINE MIR -65 197 98 417 178 36 0 chr2 122765076 122765183 -127922671 + MIR SINE MIR 31 145 -63 239 179 18 18 chr2 122765821 122765877 -127921977 - L1MC4 LINE L1 -62 7980 7925 205 309 0 0 chr2 122765877 122765961 -127921893 + (TA)n Simple_repeat Simple_repeat 1 84 0 1438 225 63 55 chr2 122765983 122766046 -127921808 - L1MC4 LINE L1 -120 7922 7861 1588 119 27 119 chr2 122766046 122766374 -127921480 - AluYb8 SINE Alu -17 301 4 1438 225 63 55 chr2 122766374 122766821 -127921033 - L1MC4 LINE L1 -181 7861 7408 442 246 103 60 chr2 122766891 122767261 -127920593 - L1MC4 LINE L1 -2054 5754 5369 558 280 86 5 chr2 122767539 122767725 -127920129 + MER58B DNA MER1_type 141 341 0 627 82 0 0 chr2 122768452 122768537 -127919317 - AluSq SINE Alu -95 218 134 2262 106 6 0 chr2 122768537 122768848 -127919006 - AluSq SINE Alu 0 313 1 1551 151 0 21 chr2 122769463 122769747 -127918107 - L1P LINE L1 -797 5349 5072 1466 187 0 62 chr2 122769912 122770217 -127917637 - AluJb SINE Alu -26 286 1 297 308 19 0 chr2 122770220 122770327 -127917527 - LTR67 LTR ERVL -41 516 408 305 296 58 63 chr2 122771209 122771415 -127916439 - L1ME3A LINE L1 -1 6169 5965 2481 78 3 0 chr2 122771520 122771827 -127916027 + AluSq SINE Alu 1 308 -5 912 148 0 7 chr2 122772306 122772448 -127915406 - FLAM_C SINE Alu -2 141 1 2201 128 0 3 chr2 122772451 122772756 -127915098 - AluSx SINE Alu -8 304 1 525 253 93 37 chr2 122772779 122772941 -127914913 - MIR SINE MIR -82 180 10 336 102 0 0 chr2 122773027 122773076 -127914778 + (TCCA)n Simple_repeat Simple_repeat 2 50 0 272 321 128 35 chr2 122773077 122773420 -127914434 - L2 LINE L2 -28 3285 2911 811 137 0 5 chr2 122773609 122773791 -127914063 + AluJb SINE Alu 21 297 -15 2336 90 0 7 chr2 122773795 122774133 -127913721 + AluY SINE Alu 1 311 0 234 253 0 67 chr2 122774778 122774853 -127913001 - MIR3 SINE MIR -54 154 85 767 246 31 69 chr2 122775074 122775306 -127912548 + MIR SINE MIR 3 221 -41 1332 189 118 7 chr2 122775306 122775576 -127912278 - AluJb SINE Alu -2 300 1 767 246 31 69 chr2 122775576 122775617 -127912237 + MIR SINE MIR 221 262 0 360 283 97 0 chr2 122776364 122776509 -127911345 + MER5A DNA MER1_type 13 171 -18 266 237 186 10 chr2 122777198 122777295 -127910559 - MIR SINE MIR -118 144 31 1545 142 40 144 chr2 122777429 122777881 -127909973 + L1MB3 LINE L1 5772 6176 -7 23 33 0 0 chr2 122778295 122778325 -127909529 + AT_rich Low_complexity Low_complexity 1 30 0 1854 145 8 0 chr2 122778325 122778587 -127909267 - AluSx SINE Alu -25 287 24 415 33 33 0 chr2 122780075 122780136 -127907718 + (CA)n Simple_repeat Simple_repeat 1 63 0 21 0 0 0 chr2 122780733 122780754 -127907100 + AT_rich Low_complexity Low_complexity 1 21 0 228 290 21 21 chr2 122782035 122782128 -127905726 - L2 LINE L2 -4 3268 3176 323 184 0 5 chr2 122782349 122782418 -127905436 - AluSp SINE Alu -116 187 137 1106 202 62 99 chr2 122782418 122783091 -127904763 + L1MB3 LINE L1 2148 2934 -3212 1899 158 14 0 chr2 122783091 122783383 -127904471 - AluJb SINE Alu -16 296 1 1106 202 62 99 chr2 122783383 122783627 -127904227 + L1MB3 LINE L1 2934 3185 -2961 1388 176 47 16 chr2 122783628 122783884 -127903970 + AluJo SINE Alu 1 264 -48 511 151 189 0 chr2 122783899 122784005 -127903849 - AluJo SINE Alu -176 136 11 307 242 0 0 chr2 122784018 122784084 -127903770 + L1MB3 LINE L1 4847 4912 -1234 2397 165 95 21 chr2 122784121 122784760 -127903094 + L1MB3 LINE L1 5389 6146 -36 2138 119 21 0 chr2 122784760 122785045 -127902809 + AluSx SINE Alu 1 291 -21 2397 165 95 21 chr2 122785045 122785085 -127902769 + L1MB3 LINE L1 6146 6182 0 240 306 69 0 chr2 122785112 122785184 -127902670 - MIR SINE MIR -163 99 23 954 76 25 0 chr2 122785444 122785562 -127902292 - AluSq/x SINE Alu -192 121 1 1963 113 45 7 chr2 122785810 122786101 -127901753 + AluSx SINE Alu 1 302 -10 688 178 137 46 chr2 122786721 122786918 -127900936 + MER20 DNA MER1_type 5 219 0 180 0 0 0 chr2 122787306 122787326 -127900528 + (TTG)n Simple_repeat Simple_repeat 2 21 0 295 327 55 0 chr2 122789066 122789176 -127898678 + L2 LINE L2 3156 3271 -1 2377 67 0 0 chr2 122789892 122790205 -127897649 + AluY SINE Alu 1 313 0 521 235 44 49 chr2 122790205 122790388 -127897466 + MER5A DNA MER1_type 4 185 -4 182 240 157 66 chr2 122790861 122790982 -127896872 + MIR SINE MIR 119 250 -12 237 301 65 0 chr2 122791722 122791815 -127896039 + L1ME4a LINE L1 5967 6065 -56 257 128 0 0 chr2 122791842 122791881 -127895973 + MADE1 DNA Mariner 1 39 -41 207 381 9 0 chr2 122792859 122792964 -127894890 - L2 LINE L2 -3 3269 3164 1241 136 6 0 chr2 122793588 122793765 -127894089 - AluSg/x SINE Alu -12 300 123 320 258 97 11 chr2 122794330 122794423 -127893431 - MIR SINE MIR -70 192 92 184 273 222 0 chr2 122795137 122795236 -127892618 + L2 LINE L2 3146 3266 -6 26 50 0 0 chr2 122795721 122795761 -127892093 + AT_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr2 122796227 122796252 -127891602 + AT_rich Low_complexity Low_complexity 1 25 0 280 332 100 40 chr2 122798101 122798351 -127889503 + L2 LINE L2 2992 3256 -16 209 301 151 14 chr2 122799054 122799127 -127888727 + L2 LINE L2 3229 3311 -2 278 286 32 71 chr2 122799910 122800064 -127887790 - L3 LINE CR1 -42 1535 1388 21 36 0 0 chr2 122800533 122800561 -127887293 + AT_rich Low_complexity Low_complexity 1 28 0 364 305 109 91 chr2 122800742 122801191 -127886663 - L1MC4a LINE L1 -1980 5828 5372 2178 120 7 7 chr2 122801413 122801714 -127886140 - AluSp SINE Alu -12 301 1 260 216 108 27 chr2 122802159 122802270 -127885584 + L1ME4a LINE L1 5941 6060 -61 180 0 0 0 chr2 122802291 122802311 -127885543 + (TG)n Simple_repeat Simple_repeat 2 21 0 1812 145 0 35 chr2 122802330 122802619 -127885235 - AluJo SINE Alu -23 289 11 199 298 87 31 chr2 122802771 122802932 -127884922 + L2 LINE L2 1482 1651 -1663 370 321 193 20 chr2 122803269 122803767 -127884087 + L2 LINE L2 1918 2501 -813 392 318 89 28 chr2 122803769 122803983 -127883871 + L2 LINE L2 2656 2882 -432 2227 135 124 16 chr2 122804128 122804514 -127883340 + MSTA LTR MaLR 1 428 0 10155 121 19 34 chr2 122804516 122806118 -127881736 + MSTA-int LTR MaLR 3 1580 0 1903 152 160 16 chr2 122806118 122806453 -127881401 + MSTA LTR MaLR 1 397 -31 2484 90 0 0 chr2 122806453 122806753 -127881101 - AluSc SINE Alu -9 300 1 1903 152 160 16 chr2 122806753 122806791 -127881063 + MSTA LTR MaLR 397 428 0 187 313 15 30 chr2 122806880 122806947 -127880907 + L2 LINE L2 3136 3201 -71 4678 152 19 17 chr2 122807095 122807704 -127880150 + L1MA5 LINE L1 5464 6077 -223 3636 134 8 15 chr2 122807704 122808235 -127879619 + MER1A DNA MER1_type 1 527 0 4678 152 19 17 chr2 122808235 122808460 -127879394 + L1MA5 LINE L1 6077 6300 0 21 0 0 0 chr2 122810057 122810078 -127877776 + AT_rich Low_complexity Low_complexity 1 21 0 1415 113 28 20 chr2 122813981 122814229 -127873625 - AluSq SINE Alu -63 250 1 514 264 57 25 chr2 122814229 122814388 -127873466 + L2 LINE L2 3145 3308 -5 409 235 135 56 chr2 122814418 122814788 -127873066 - L2 LINE L2 -252 3061 2624 973 289 56 14 chr2 122815084 122815441 -127872413 + LTR16A LTR ERVL 41 412 -38 435 243 19 75 chr2 122815820 122815993 -127871861 + MLT1H LTR MaLR 46 206 -343 2142 103 14 7 chr2 122815993 122816283 -127871571 - AluSq SINE Alu -5 308 17 435 243 19 75 chr2 122816283 122816323 -127871531 + MLT1H LTR MaLR 206 247 -302 405 265 30 8 chr2 122816430 122816562 -127871292 + MLT1G1 LTR MaLR 456 590 -5 537 242 170 25 chr2 122817472 122817749 -127870105 - LTR16A LTR ERVL -75 375 59 216 324 99 27 chr2 122817806 122817917 -127869937 + MIR SINE MIR 109 227 -35 434 200 19 29 chr2 122818012 122818117 -127869737 - MLT1J LTR MaLR 0 511 408 672 212 117 46 chr2 122818131 122818332 -127869522 + MER33 DNA MER1_type 14 199 -2386 2323 91 0 10 chr2 122818332 122818641 -127869213 - AluSx SINE Alu -5 307 2 672 212 117 46 chr2 122818641 122818698 -127869156 + MER33 DNA MER1_type 199 251 -2334 2303 110 7 13 chr2 122818698 122819008 -127868846 - AluSq SINE Alu -5 308 1 672 212 117 46 chr2 122819008 122819031 -127868823 + MER33 DNA MER1_type 251 316 -8 859 174 158 5 chr2 122819048 122819238 -127868616 + MER20 DNA MER1_type 1 219 0 1020 206 71 28 chr2 122819327 122819609 -127868245 - MLT1J LTR MaLR -205 306 13 398 248 95 0 chr2 122819644 122819781 -127868073 - MIR SINE MIR -111 151 2 604 259 21 21 chr2 122819918 122820111 -127867743 + L1MD3 LINE L1 7798 7990 -5 573 28 0 0 chr2 122820329 122820400 -127867454 + (TC)n Simple_repeat Simple_repeat 2 72 0 243 0 0 0 chr2 122820399 122820426 -127867428 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 2246 107 0 26 chr2 122820427 122820736 -127867118 - AluSx SINE Alu -11 301 1 525 16 0 0 chr2 122820817 122820879 -127866975 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 216 67 0 0 chr2 122820917 122820947 -127866907 + (GA)n Simple_repeat Simple_repeat 2 31 0 1333 204 16 4 chr2 122820961 122821211 -127866643 - AluJb SINE Alu -59 253 1 417 156 10 104 chr2 122821232 122821257 -127866597 - FLAM SINE Alu -184 128 102 2254 131 91 35 chr2 122821257 122821662 -127866192 - MSTA LTR MaLR 0 428 1 417 156 10 104 chr2 122821662 122821732 -127866122 - FLAM SINE Alu -210 102 42 464 350 44 5 chr2 122822130 122822333 -127865521 - MIR SINE MIR -50 212 2 536 249 244 9 chr2 122822344 122822557 -127865297 + HAL1 LINE L1 637 899 -1608 2149 128 3 10 chr2 122822646 122822951 -127864903 + AluSx SINE Alu 1 303 -9 771 158 8 15 chr2 122822966 122823099 -127864755 + FLAM_C SINE Alu 1 132 -1 417 278 32 16 chr2 122823236 122823362 -127864492 + MER91A DNA MER1_type 14 141 -55 289 239 93 83 chr2 122823421 122823626 -127864228 + L2 LINE L2 2876 3082 -190 3835 184 57 51 chr2 122823693 122825217 -127862637 - MER52A LTR ERV1 0 1755 1 197 303 15 15 chr2 122825257 122825323 -127862531 + MIR SINE MIR 28 93 -169 1963 143 13 16 chr2 122825357 122825664 -127862190 - AluJb SINE Alu -1 311 6 265 391 93 0 chr2 122825665 122825816 -127862038 + MIR SINE MIR 88 252 -10 1016 236 104 32 chr2 122826088 122826234 -127861620 - HsTC2 DNA Tc2 -1 1897 1763 1842 136 3 55 chr2 122826234 122826542 -127861312 + AluJo SINE Alu 1 292 -20 1016 236 104 32 chr2 122826542 122826588 -127861266 - HsTC2 DNA Tc2 -135 1763 1722 2415 88 0 0 chr2 122826588 122826883 -127860971 - AluSq SINE Alu -18 295 1 1016 236 104 32 chr2 122826883 122827129 -127860725 - HsTC2 DNA Tc2 -176 1722 1250 479 257 88 22 chr2 122827125 122827261 -127860593 - HsTC2 DNA Tc2 -1751 147 3 * 394 261 116 36 chr2 122827277 122827415 -127860439 + LTR67 LTR ERVL 74 222 -335 2285 114 0 0 chr2 122827604 122827902 -127859952 - AluSx SINE Alu -14 298 1 446 266 32 62 chr2 122827904 122828104 -127859750 + MLT1J LTR MaLR 25 180 -229 2449 91 3 0 chr2 122828507 122828814 -127859040 - AluSx SINE Alu -4 308 1 548 254 81 12 chr2 122829301 122829474 -127858380 + MLT1J LTR MaLR 224 408 -103 228 194 0 0 chr2 122829724 122829789 -127858065 + Alu SINE Alu 247 311 0 825 129 0 0 chr2 122829791 122829907 -127857947 + FLAM_C SINE Alu 1 116 -17 35 0 0 0 chr2 122829912 122829947 -127857907 + AT_rich Low_complexity Low_complexity 1 35 0 596 287 41 0 chr2 122829980 122830175 -127857679 + MIR SINE MIR 16 218 -44 384 59 0 0 chr2 122831105 122831156 -127856698 + (TTTTG)n Simple_repeat Simple_repeat 5 55 0 2295 100 0 0 chr2 122831156 122831436 -127856418 - AluSx SINE Alu -32 280 1 901 195 0 7 chr2 122832037 122832191 -127855663 + AluJo SINE Alu 5 157 -155 1606 89 163 56 chr2 122832191 122832461 -127855393 - AluSx SINE Alu -13 299 1 608 184 53 0 chr2 122832474 122832588 -127855266 - FLAM_C SINE Alu -13 120 1 609 296 62 0 chr2 122833422 122833648 -127854206 - MIR SINE MIR 0 262 23 431 210 100 0 chr2 122833650 122833750 -127854104 - MER3 DNA MER1_type -28 181 72 782 159 0 36 chr2 122834552 122834715 -127853139 - FLAM_C SINE Alu 0 158 1 1402 276 68 16 chr2 122834803 122835365 -127852489 - L1ME3A LINE L1 -53 6117 5527 320 231 113 25 chr2 122835600 122835760 -127852094 + L2 LINE L2 2745 2918 -396 599 159 80 0 chr2 122837453 122837566 -127850288 + L1MB3 LINE L1 6062 6183 0 249 253 126 0 chr2 122837655 122837742 -127850112 - MIR SINE MIR -72 190 93 187 307 102 34 chr2 122839198 122839286 -127848568 - L2 LINE L2 -43 3229 3136 2252 111 0 10 chr2 122840207 122840513 -127847341 + AluSx SINE Alu 1 303 -9 281 303 56 12 chr2 122840613 122840775 -127847079 + L1MC4a LINE L1 5589 5757 -2051 341 276 138 13 chr2 122840987 122841139 -127846715 + L1MC4a LINE L1 6061 6231 -1577 228 137 20 39 chr2 122842004 122842055 -127845799 - MIR SINE MIR -107 155 106 3076 133 7 65 chr2 122842404 122842959 -127844895 + MER1A DNA MER1_type 1 523 -4 1535 219 73 35 chr2 122843957 122844436 -127843418 + MLT1D LTR MaLR 2 498 -7 239 223 41 50 chr2 122846577 122846735 -127841119 - MIR SINE MIR -14 248 52 554 252 206 14 chr2 122847340 122847622 -127840232 + MER46C DNA MER2_type 1 336 -2 213 234 0 0 chr2 122848313 122848360 -127839494 - MIR SINE MIR -110 152 106 306 226 16 0 chr2 122849342 122849404 -127838450 - L1MC4 LINE L1 -1342 6700 6638 21 36 0 0 chr2 122849562 122849590 -127838264 + AT_rich Low_complexity Low_complexity 1 28 0 2460 88 0 0 chr2 122849604 122849900 -127837954 - AluSg SINE Alu -14 296 1 366 244 91 34 chr2 122849922 122849977 -127837877 - L1MD3 LINE L1 0 7995 7945 1932 144 34 3 chr2 122849977 122850268 -127837586 + AluSx SINE Alu 1 300 -12 366 244 91 34 chr2 122850268 122850449 -127837405 - L1MD3 LINE L1 -50 7945 6101 1384 159 40 0 chr2 122850526 122850803 -127837051 + L1MA8 LINE L1 5993 6280 -11 435 52 0 0 chr2 122851001 122851059 -127836795 + (CTATT)n Simple_repeat Simple_repeat 3 60 0 1920 146 11 0 chr2 122851059 122851339 -127836515 - AluJb SINE Alu -27 285 3 780 241 123 61 chr2 122851391 122851831 -127836023 + MLT1C LTR MaLR 1 467 0 355 220 136 42 chr2 122851901 122852019 -127835835 + AluJo SINE Alu 15 143 -159 234 262 226 0 chr2 122853084 122853168 -127834686 + L2 LINE L2 3152 3254 -18 2038 127 0 56 chr2 122853497 122853819 -127834035 + AluSx SINE Alu 1 304 -8 295 290 30 0 chr2 122853991 122854091 -127833763 - MIR SINE MIR -132 130 28 486 311 28 11 chr2 122854412 122854589 -127833265 - MIR SINE MIR 0 262 83 2528 57 3 0 chr2 122854736 122855034 -127832820 - AluY SINE Alu -12 299 1 609 209 7 7 chr2 122855237 122855376 -127832478 + AluJb SINE Alu 12 150 -162 377 347 48 0 chr2 122855816 122855940 -127831914 + L2 LINE L2 3139 3268 -4 189 107 0 0 chr2 122855960 122855988 -127831866 + (CA)n Simple_repeat Simple_repeat 1 28 0 1455 141 104 63 chr2 122855988 122856257 -127831597 - AluJo SINE Alu -32 280 1 2052 87 79 7 chr2 122857327 122857604 -127830250 - AluSx SINE Alu -13 299 3 450 326 16 37 chr2 122858633 122858823 -127829031 + MIR3 SINE MIR 15 200 -8 292 341 101 0 chr2 122858947 122859076 -127828778 + L3 LINE CR1 1210 1351 -226 183 349 47 9 chr2 122859631 122859737 -127828117 - MIR SINE MIR -147 115 6 334 292 17 25 chr2 122860503 122860623 -127827231 - MIR SINE MIR -109 153 35 1842 169 10 19 chr2 122860828 122861141 -127826713 + AluJb SINE Alu 3 312 0 180 0 0 0 chr2 122861153 122861173 -127826681 + (GGGA)n Simple_repeat Simple_repeat 1 20 0 190 200 317 0 chr2 122861261 122861321 -127826533 - MIR SINE MIR -114 148 70 2227 96 0 3 chr2 122862298 122862580 -127825274 - AluSq SINE Alu -32 281 1 225 0 0 0 chr2 122862667 122862692 -127825162 + (A)n Simple_repeat Simple_repeat 1 25 0 780 158 0 23 chr2 122862747 122862880 -127824974 + FLAM_C SINE Alu 2 131 -2 185 139 0 56 chr2 122864553 122864589 -127823265 + L3 LINE CR1 1524 1557 -20 407 302 0 0 chr2 122864828 122864924 -127822930 - L1MC4 LINE L1 -1333 6709 6614 * 414 289 0 0 chr2 122864894 122864984 -127822870 + L1MC4 LINE L1 6614 6703 -1339 342 288 19 45 chr2 122864928 122865035 -127822819 - L1MC4 LINE L1 -1339 6983 6875 * 1895 178 3 0 chr2 122865035 122865328 -127822526 - AluJo SINE Alu -18 294 1 342 288 19 45 chr2 122865328 122865374 -127822480 - L1MC4 LINE L1 -1447 6875 1942 1734 143 89 0 chr2 122865462 122865721 -127822133 + AluSx SINE Alu 1 282 -30 183 42 0 0 chr2 122865723 122865747 -127822107 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 259 328 86 43 chr2 122865920 122866106 -127821748 - L3 LINE CR1 -33 1544 1351 182 372 85 0 chr2 122867774 122867868 -127819986 - MIR SINE MIR -91 117 16 869 161 29 40 chr2 122870705 122870879 -127816975 - FAM SINE Alu -3 172 1 933 163 50 6 chr2 122871659 122871819 -127816035 - FAM SINE Alu -4 171 5 22 0 0 0 chr2 122871958 122871980 -127815874 + AT_rich Low_complexity Low_complexity 1 22 0 2289 84 7 14 chr2 122872460 122872757 -127815097 + AluSx SINE Alu 3 297 -15 431 154 0 26 chr2 122873338 122873416 -127814438 - FRAM/FAM SINE Alu -101 75 1 340 290 122 0 chr2 122873416 122873547 -127814307 - MIR SINE MIR -96 166 20 1115 157 96 37 chr2 122874891 122875165 -127812689 + MLT1E1 LTR MaLR 3 252 -372 1081 226 54 20 chr2 122875177 122875440 -127812414 - L1MC4 LINE L1 -4718 1710 1430 2481 66 0 0 chr2 122875440 122875744 -127812110 + AluSg SINE Alu 1 304 -6 1081 226 54 20 chr2 122875744 122875834 -127812020 - L1MC4 LINE L1 -4998 1430 1345 1089 216 55 3 chr2 122875860 122876152 -127811702 + MLT1E1 LTR MaLR 316 622 -2 306 220 110 40 chr2 122876252 122876352 -127811502 - L2 LINE L2 0 3313 3207 252 326 194 0 chr2 122876889 122876987 -127810867 + MER5B DNA MER1_type 61 177 -1 861 224 68 4 chr2 122878845 122879082 -127808772 + L1ME LINE L1 5476 5727 -437 236 274 110 0 chr2 122880765 122880838 -127807016 + Charlie8 DNA MER1_type 118 198 -2219 27 29 0 0 chr2 122881043 122881077 -127806777 + AT_rich Low_complexity Low_complexity 1 34 0 198 169 237 0 chr2 122881503 122881562 -127806292 + MIR3 SINE MIR 126 198 -10 23 0 0 0 chr2 122883113 122883136 -127804718 + AT_rich Low_complexity Low_complexity 1 23 0 2052 119 40 0 chr2 122883693 122883970 -127803884 - AluSx SINE Alu -22 290 3 216 238 276 19 chr2 122884103 122884208 -127803646 + L2 LINE L2 3141 3272 0 203 308 15 0 chr2 122884896 122884961 -127802893 + L2 LINE L2 3247 3312 -1 290 132 0 73 chr2 122885314 122885382 -127802472 - AluJ/FRAM SINE Alu -7 295 233 2089 120 3 3 chr2 122885833 122886125 -127801729 - AluSx SINE Alu -20 292 1 26 0 0 0 chr2 122886404 122886430 -127801424 + AT_rich Low_complexity Low_complexity 1 26 0 1911 67 8 0 chr2 122886936 122887176 -127800678 + AluY SINE Alu 64 305 -6 2585 176 53 16 chr2 122887177 122887740 -127800114 + L1MB3 LINE L1 5598 6181 -2 619 167 0 17 chr2 122887756 122887876 -127799978 + L1MB7 LINE L1 6015 6132 -52 313 200 62 52 chr2 122887868 122887883 -127799971 + L1ME3A LINE L1 1545 1558 -4982 * 1988 148 0 3 chr2 122887883 122888181 -127799673 + AluJb SINE Alu 1 297 -15 313 200 62 52 chr2 122888181 122888327 -127799527 + L1ME3A LINE L1 1558 1690 -4850 312 241 129 14 chr2 122888390 122888516 -127799338 + L1ME3A LINE L1 1703 1929 -4611 1554 262 106 37 chr2 122888629 122888907 -127798947 + L1ME3A LINE L1 4287 4544 -2020 2142 98 11 0 chr2 122888907 122889193 -127798661 + AluSp SINE Alu 1 289 -24 1554 262 106 37 chr2 122889193 122889281 -127798573 + L1ME3A LINE L1 4544 4625 -1939 2130 120 0 0 chr2 122889281 122889572 -127798282 + AluSg1 SINE Alu 2 292 -17 1554 262 106 37 chr2 122889572 122891132 -127796722 + L1ME3A LINE L1 4625 6340 -224 717 149 35 0 chr2 122891138 122891252 -127796602 + FLAM_A SINE Alu 4 121 -12 2200 99 7 3 chr2 122891281 122891573 -127796281 + AluSg SINE Alu 1 293 -17 356 322 100 28 chr2 122892095 122892275 -127795579 - MIR SINE MIR -41 221 29 436 275 22 22 chr2 122893347 122893485 -127794369 + MARNA DNA Mariner 83 220 -366 825 221 26 5 chr2 122893721 122893916 -127793938 + MER3 DNA MER1_type 9 207 -2 378 262 31 7 chr2 122894002 122894180 -127793674 - Charlie8 DNA MER1_type -2196 221 2 389 231 28 70 chr2 122894673 122894816 -127793038 - MIR SINE MIR -57 205 69 23 33 0 0 chr2 122895200 122895230 -127792624 + AT_rich Low_complexity Low_complexity 1 30 0 576 243 45 60 chr2 122895378 122895646 -127792208 + HAL1 LINE L1 1582 1845 -662 2408 105 0 6 chr2 122895673 122895987 -127791867 - AluSx SINE Alu 0 312 1 284 273 91 0 chr2 122896370 122896480 -127791374 - L1MC5 LINE L1 -569 7392 7273 434 192 61 0 chr2 122896979 122897078 -127790776 + L1MB7 LINE L1 5557 5661 -505 17594 159 23 12 chr2 122897097 122900497 -127787357 + L1PA14 LINE L1 1 3359 -4240 2499 66 0 3 chr2 122900497 122900801 -127787053 + AluY SINE Alu 1 303 -8 17594 159 23 12 chr2 122900801 122904129 -127783725 + L1PA14 LINE L1 3359 7595 -4 33 0 0 0 chr2 122904130 122904163 -127783691 + AT_rich Low_complexity Low_complexity 1 33 0 1980 111 7 4 chr2 122904195 122904505 -127783349 + AluSc SINE Alu 1 311 0 1597 201 46 62 chr2 122904594 122904714 -127783140 + L1MB7 LINE L1 5701 5821 -363 1642 194 3 13 chr2 122904714 122905013 -127782841 + AluJb SINE Alu 10 305 -7 1597 201 46 62 chr2 122905013 122905102 -127782752 + L1MB7 LINE L1 5821 5910 -274 1552 149 47 64 chr2 122905102 122905398 -127782456 + AluJo SINE Alu 1 291 -21 1597 201 46 62 chr2 122905398 122905669 -127782185 + L1MB7 LINE L1 5910 6174 -10 748 220 107 70 chr2 122906397 122906466 -127781388 + L2 LINE L2 2626 2691 -622 1958 120 53 11 chr2 122906466 122906750 -127781104 - AluSg SINE Alu -14 296 1 748 220 107 70 chr2 122906750 122906765 -127781089 + L2 LINE L2 2691 2704 -609 1926 129 71 10 chr2 122906765 122907059 -127780795 - AluSx SINE Alu 0 312 1 748 220 107 70 chr2 122907059 122907371 -127780483 + L2 LINE L2 2704 3030 -283 2241 89 0 0 chr2 122908077 122908377 -127779477 + AluSg SINE Alu 1 300 0 651 182 0 0 chr2 122908449 122908559 -127779295 + AluSg/x SINE Alu 202 311 -1 2408 92 0 0 chr2 122908574 122908877 -127778977 + AluSg1 SINE Alu 1 303 -6 2096 171 69 10 chr2 122909142 122909546 -127778308 + MSTC LTR MaLR 1 428 0 2887 188 41 33 chr2 122909940 122910642 -127777212 + L1MB7 LINE L1 5459 6166 -18 246 62 0 0 chr2 122910650 122910682 -127777172 + (CAT)n Simple_repeat Simple_repeat 2 33 0 1068 134 10 35 chr2 122910692 122910894 -127776960 + L1MD3 LINE L1 7733 7929 -66 324 284 40 67 chr2 122910917 122911115 -127776739 + L1MC4a LINE L1 5743 5939 -182 269 227 30 0 chr2 122911455 122911521 -127776333 + L1MC5 LINE L1 7833 7900 -61 1004 145 0 20 chr2 122911529 122911681 -127776173 - AluSq SINE Alu -37 276 128 2174 107 43 0 chr2 122911681 122911980 -127775874 - AluSx SINE Alu 0 312 1 1240 138 95 0 chr2 122912271 122912481 -127775373 + MER30 DNA MER1_type 1 230 0 301 308 146 8 chr2 122913458 122913588 -127774266 - MIR SINE MIR -113 149 2 310 338 96 18 chr2 122913669 122913739 -127774115 + MIR SINE MIR 20 83 -179 2254 121 0 0 chr2 122913739 122914044 -127773810 + AluSq SINE Alu 1 305 -8 310 338 96 18 chr2 122914044 122914192 -127773662 + MIR SINE MIR 83 255 -7 279 225 127 63 chr2 122914786 122914928 -127772926 + MER104 DNA Tc2 30 180 0 243 250 156 16 chr2 122914954 122915082 -127772772 - L1ME4a LINE L1 -20 6101 5956 1873 173 3 3 chr2 122915292 122915599 -127772255 - AluJo SINE Alu -1 311 5 2233 117 3 0 chr2 122915648 122915955 -127771899 + AluSg SINE Alu 1 308 -2 483 332 50 14 chr2 122916644 122916864 -127770990 + MIR SINE MIR 3 230 -32 419 248 46 9 chr2 122917283 122917392 -127770462 - MER94 DNA DNA -17 117 5 28 48 0 0 chr2 122920218 122920260 -127767594 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 122921302 122921325 -127766529 + AT_rich Low_complexity Low_complexity 1 23 0 1915 156 3 10 chr2 122921689 122922003 -127765851 + AluJb SINE Alu 1 312 0 1751 153 21 7 chr2 122923510 122923792 -127764062 - AluJo SINE Alu -26 286 1 507 259 76 62 chr2 122923866 122924090 -127763764 + MIR SINE MIR 2 228 -34 297 307 80 0 chr2 122925460 122925548 -127762306 + MIR SINE MIR 27 121 -141 186 313 31 0 chr2 122929201 122929265 -127758589 + MIR SINE MIR 81 146 -62 22 35 0 0 chr2 122929946 122929975 -127757879 + AT_rich Low_complexity Low_complexity 1 29 0 1910 133 32 3 chr2 122929975 122930260 -127757594 - AluSx SINE Alu -19 293 1 2042 140 3 0 chr2 122930262 122930555 -127757299 - AluSx SINE Alu -18 294 1 410 307 114 76 chr2 122932621 122933070 -127754784 + L2 LINE L2 2807 3272 0 28 0 0 0 chr2 122934123 122934151 -127753703 + AT_rich Low_complexity Low_complexity 1 28 0 1796 171 10 10 chr2 122934579 122934889 -127752965 + AluJo SINE Alu 3 312 0 271 316 13 0 chr2 122934989 122935141 -127752713 + L1 LINE L1 2380 2533 -3613 366 281 36 54 chr2 122935276 122935443 -127752411 + L1 LINE L1 2664 2827 -3319 37 23 0 0 chr2 122935721 122935765 -127752089 + AT_rich Low_complexity Low_complexity 1 44 0 313 327 36 0 chr2 122936405 122936515 -127751339 + L2 LINE L2 3199 3312 -1 35 0 0 0 chr2 122936687 122936722 -127751132 + AT_rich Low_complexity Low_complexity 1 35 0 472 288 85 17 chr2 122937563 122937740 -127750114 - MIR SINE MIR -70 192 4 422 244 113 17 chr2 122940045 122940160 -127747694 - MIR SINE MIR -61 201 76 457 310 198 34 chr2 122940684 122940844 -127747010 - L1M4 LINE L1 -1251 4895 4763 1889 132 0 14 chr2 122940844 122941131 -127746723 - AluSx SINE Alu -29 283 1 457 310 198 34 chr2 122941131 122941752 -127746102 - L1M4 LINE L1 -1383 4763 3954 2210 121 7 0 chr2 122941752 122942058 -127745796 + AluSx SINE Alu 1 308 -4 457 310 198 34 chr2 122942058 122942149 -127745705 - L1M4 LINE L1 -2192 3954 3879 2001 148 0 3 chr2 122942190 122942487 -127745367 + AluSx SINE Alu 6 301 -11 233 284 45 11 chr2 122942547 122942635 -127745219 - L1M4 LINE L1 -2484 3662 3572 21 0 0 0 chr2 122942642 122942663 -127745191 + AT_rich Low_complexity Low_complexity 1 21 0 1681 179 3 33 chr2 122942977 122943278 -127744576 - AluJb SINE Alu -20 292 1 1061 147 12 0 chr2 122943421 122943584 -127744270 + AluSx SINE Alu 2 166 -146 776 154 0 29 chr2 122943751 122943887 -127743967 + FLAM_C SINE Alu 1 132 -1 2338 99 3 0 chr2 122943974 122944286 -127743568 - AluSp SINE Alu 0 313 1 653 229 64 2 chr2 122944470 122944662 -127743192 - L1MD2 LINE L1 -2 7925 6176 717 255 60 53 chr2 122944716 122944739 -127743115 - L1MEd LINE L1 -4867 1252 1231 2032 164 3 0 chr2 122944739 122945043 -127742811 - AluSx SINE Alu -7 305 1 717 255 60 53 chr2 122945043 122945127 -127742727 - L1MEd LINE L1 -4888 1231 1149 2175 125 0 0 chr2 122945127 122945423 -127742431 - AluSx SINE Alu -16 296 1 717 255 60 53 chr2 122945423 122945675 -127742179 - L1MEd LINE L1 -4970 1149 953 1664 160 30 33 chr2 122945675 122945975 -127741879 - AluJo SINE Alu -13 299 1 717 255 60 53 chr2 122945975 122946035 -127741819 - L1MEd LINE L1 -5166 953 895 339 380 55 21 chr2 122946137 122946374 -127741480 - L1MEd LINE L1 -5450 669 425 448 324 112 35 chr2 122946698 122947065 -127740789 - L1MEd LINE L1 -5283 836 442 8383 29 7 1 chr2 122947271 122948353 -127739501 - L1P LINE L1 -2223 3923 2836 3934 20 2 0 chr2 122948353 122948807 -127739047 + L1PA2 LINE L1 5697 6153 -2 230 323 93 6 chr2 122948830 122948991 -127738863 - L1MEd LINE L1 -5900 219 45 1845 166 30 0 chr2 122949130 122949426 -127738428 + AluJb SINE Alu 1 305 -7 1853 121 3 64 chr2 122950032 122950346 -127737508 + AluJb SINE Alu 2 296 -16 2158 123 3 10 chr2 122951061 122951362 -127736492 - AluSx SINE Alu -9 303 5 356 288 74 43 chr2 122952239 122952402 -127735452 + MER5A DNA MER1_type 11 189 0 301 320 0 0 chr2 122952852 122952930 -127734924 + L2 LINE L2 3195 3272 0 23 33 0 0 chr2 122953015 122953045 -127734809 + AT_rich Low_complexity Low_complexity 1 30 0 290 290 119 6 chr2 122954844 122955011 -127732843 - MIR SINE MIR -55 207 16 403 328 64 10 chr2 122957857 122958061 -127729793 + MIR SINE MIR 47 261 -1 2320 101 0 0 chr2 122958637 122958933 -127728921 + AluY SINE Alu 1 296 -15 2332 72 0 0 chr2 122961096 122961375 -127726479 + AluSx SINE Alu 1 279 -33 246 62 0 0 chr2 122961375 122961407 -127726447 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1706 191 0 26 chr2 122961592 122961901 -127725953 + AluJo SINE Alu 1 301 -11 194 263 0 0 chr2 122961924 122961962 -127725892 - L2 LINE L2 -49 3223 3186 285 247 52 0 chr2 122962635 122962712 -127725142 + MER20B DNA MER1_type 54 134 -649 1268 190 19 91 chr2 122962745 122963038 -127724816 + MLT1A2 LTR MaLR 24 288 -86 1170 74 211 0 chr2 122963038 122963228 -127724626 + MER30 DNA MER1_type 1 230 0 1268 190 19 91 chr2 122963228 122963298 -127724556 + MLT1A2 LTR MaLR 288 361 -13 3416 147 23 27 chr2 122963876 122964198 -127723656 + L1MA8 LINE L1 5631 5953 -338 1332 189 124 8 chr2 122964198 122964463 -127723391 + AluJo SINE Alu 1 296 -6 3416 147 23 27 chr2 122964463 122964801 -127723053 + L1MA8 LINE L1 5953 6288 -3 1046 156 156 74 chr2 122964809 122965052 -127722802 + AluJo SINE Alu 5 267 -45 450 118 83 14 chr2 122965054 122965198 -127722656 + GA-rich Low_complexity Low_complexity 2 155 0 27 0 0 0 chr2 122965228 122965255 -127722599 + AT_rich Low_complexity Low_complexity 1 27 0 324 48 0 0 chr2 122966035 122966077 -127721777 + (CA)n Simple_repeat Simple_repeat 1 42 0 626 246 0 0 chr2 122967782 122967912 -127719942 - FLAM_A SINE Alu -1 132 3 1072 202 20 10 chr2 122970274 122970477 -127717377 - AluJb SINE Alu -20 292 88 200 83 0 28 chr2 122972420 122972456 -127715398 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7272 21 2 1 chr2 122972456 122973545 -127714309 - L1PA3 LINE L1 -24 6131 5041 8925 25 0 1 chr2 122973546 122974645 -127713209 + L1PA3 LINE L1 3929 5026 -1120 315 178 0 14 chr2 122974715 122974788 -127713066 + L1MB5 LINE L1 5796 5867 -307 238 98 0 0 chr2 122974791 122974832 -127713022 + L1MB5 LINE L1 6124 6164 -10 6713 142 29 3 chr2 122975399 122977351 -127710503 - L1PA11 LINE L1 -2 6487 4481 1084 222 95 0 chr2 122977380 122977686 -127710168 - L1PA11 LINE L1 -4933 1528 1194 536 263 16 38 chr2 122978055 122978241 -127709613 - MLT1K LTR MaLR -109 479 298 243 0 0 0 chr2 122978882 122978909 -127708945 + (T)n Simple_repeat Simple_repeat 1 27 0 358 206 0 0 chr2 122978932 122978995 -127708859 - AluJ/FLAM SINE Alu -239 63 1 524 314 101 33 chr2 122979075 122979530 -127708324 - L1ME4a LINE L1 -266 5855 5370 1668 177 7 4 chr2 122979606 122979883 -127707971 + AluJo SINE Alu 18 295 -17 238 250 14 0 chr2 122980897 122980969 -127706885 + L1ME LINE L1 177 249 -5956 1584 275 86 75 chr2 122981033 122982726 -127705128 + L1ME LINE L1 169 1880 -4516 2299 84 0 0 chr2 122983043 122983339 -127704515 + AluY SINE Alu 1 296 -15 210 277 64 53 chr2 122985717 122985811 -127702043 + L2 LINE L2 3204 3298 -15 551 224 182 8 chr2 122986643 122986907 -127700947 + L1M4 LINE L1 3703 4012 -2134 2032 120 0 0 chr2 122986907 122987190 -127700664 + AluSx SINE Alu 1 283 -29 310 57 38 0 chr2 122987192 122987245 -127700609 + (CA)n Simple_repeat Simple_repeat 2 56 0 780 51 74 12 chr2 122987295 122987636 -127700218 + (CA)n Simple_repeat Simple_repeat 1 362 0 1250 222 147 9 chr2 122987674 122988111 -127699743 + L1M4 LINE L1 4040 4536 -1610 319 224 79 0 chr2 122992062 122992138 -127695716 + L1MC4 LINE L1 6614 6695 -1347 225 152 0 0 chr2 122992144 122992190 -127695664 - LTR66 LTR ERVL -171 439 394 308 361 33 0 chr2 122993460 122993582 -127694272 - L2 LINE L2 -25 3247 3122 1129 106 17 45 chr2 122994169 122994348 -127693506 + AluSq SINE Alu 1 174 -139 233 321 272 17 chr2 122994405 122994692 -127693162 - L2 LINE L2 -25 3247 2888 311 275 55 138 chr2 122995582 122995982 -127691872 + L2 LINE L2 2344 2710 -604 1451 181 59 0 chr2 122996008 122996311 -127691543 - L1MC3 LINE L1 -170 7615 7295 1531 195 87 45 chr2 122996314 122996740 -127691114 - L1MC3 LINE L1 -636 7149 6706 193 316 68 17 chr2 122996971 122997088 -127690766 - MIR SINE MIR -109 153 31 2242 167 59 20 chr2 123000621 123000707 -127687147 + L1MB8 LINE L1 5111 5192 -982 2444 61 0 0 chr2 123000707 123001002 -127686852 + AluY SINE Alu 13 307 -4 2242 167 59 20 chr2 123001002 123001531 -127686323 + L1MB8 LINE L1 5192 5761 -413 378 165 24 12 chr2 123001545 123001630 -127686224 + L1MB8 LINE L1 6087 6172 -6 6287 119 51 12 chr2 123001645 123003319 -127684535 + L1MA3 LINE L1 4553 6305 0 2104 127 0 7 chr2 123003324 123003624 -127684230 + AluY SINE Alu 1 298 -13 2199 102 0 3 chr2 123003626 123003929 -127683925 + AluY SINE Alu 1 302 -9 2324 96 0 0 chr2 123003964 123004265 -127683589 + AluSq SINE Alu 1 301 -12 23 54 0 0 chr2 123004265 123004302 -127683552 + AT_rich Low_complexity Low_complexity 1 37 0 535 247 70 36 chr2 123004419 123004615 -127683239 - MIR SINE MIR -19 243 40 1538 149 4 4 chr2 123005418 123005686 -127682168 + L1MA4 LINE L1 5753 6020 -280 356 172 35 0 chr2 123005691 123005778 -127682076 + L1MB4 LINE L1 6091 6180 0 222 360 70 68 chr2 123005781 123006281 -127681573 - L2 LINE L2 -778 2536 2036 2007 108 0 21 chr2 123006297 123006610 -127681244 - AluY SINE Alu 0 307 1 953 114 8 0 chr2 123006613 123006745 -127681109 - AluSq/x SINE Alu -180 133 1 1879 142 23 32 chr2 123006783 123007092 -127680762 - AluSx SINE Alu -6 306 1 3719 173 39 30 chr2 123007097 123008139 -127679715 + L1MB7 LINE L1 5078 6137 -47 22 56 0 0 chr2 123008150 123008186 -127679668 + AT_rich Low_complexity Low_complexity 1 36 0 277 210 49 25 chr2 123008315 123008396 -127679458 + MER50 LTR ERV1 518 600 -134 1005 203 105 3 chr2 123008417 123008703 -127679151 + L1M4 LINE L1 3962 4276 -1870 872 131 23 11 chr2 123008869 123009044 -127678810 + GA-rich Low_complexity Low_complexity 1 177 0 299 192 13 39 chr2 123009045 123009123 -127678731 + A-rich Low_complexity Low_complexity 5 80 0 223 341 31 23 chr2 123010300 123010429 -127677425 + MIR3 SINE MIR 29 158 -50 * 264 345 43 9 chr2 123010408 123010524 -127677330 - L2 LINE L2 -713 2601 2482 1537 326 64 32 chr2 123010775 123011632 -127676222 - L2 LINE L2 -1 3312 2420 218 325 12 0 chr2 123011975 123012058 -127675796 - MIR SINE MIR 0 262 179 2403 94 0 3 chr2 123012534 123012842 -127675012 + AluSq SINE Alu 1 307 -6 234 208 75 0 chr2 123013184 123013237 -127674617 - L2 LINE L2 -1 3312 3256 411 239 43 6 chr2 123013321 123013484 -127674370 - MER117 DNA MER1_type -26 171 3 30 0 0 0 chr2 123014438 123014468 -127673386 + AT_rich Low_complexity Low_complexity 1 30 0 409 234 13 51 chr2 123014528 123014686 -127673168 + HAL1 LINE L1 868 1019 -1488 4130 226 64 67 chr2 123014698 123017202 -127670652 + L1M4 LINE L1 14 2524 -4120 553 229 66 0 chr2 123017202 123017324 -127670530 - FLAM_A SINE Alu -2 131 2 4130 226 64 67 chr2 123017324 123017767 -127670087 + L1M4 LINE L1 2524 2967 -3677 1828 152 14 7 chr2 123017767 123018056 -127669798 - AluJb SINE Alu -18 294 4 4130 226 64 67 chr2 123018056 123018141 -127669713 + L1M4 LINE L1 2967 3051 -3593 1878 173 0 0 chr2 123018141 123018430 -127669424 + AluSx SINE Alu 1 289 -23 4130 226 64 67 chr2 123018430 123019130 -127668724 + L1M4 LINE L1 3051 3989 -2655 1350 159 9 4 chr2 123019181 123019407 -127668447 + AluJb SINE Alu 81 307 -5 243 88 0 0 chr2 123019422 123019456 -127668398 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 294 301 42 0 chr2 123019456 123019599 -127668255 + HAL1 LINE L1 1732 1880 -627 787 245 70 70 chr2 123019605 123019891 -127667963 + HAL1 LINE L1 1961 2249 -258 2298 95 3 0 chr2 123019891 123020187 -127667667 + AluSp SINE Alu 1 297 -16 787 245 70 70 chr2 123020187 123020447 -127667407 + HAL1 LINE L1 2248 2507 0 27 0 0 0 chr2 123022005 123022032 -127665822 + AT_rich Low_complexity Low_complexity 1 27 0 195 317 106 10 chr2 123022063 123022138 -127665716 + MIR SINE MIR 20 109 -99 3071 166 22 9 chr2 123022138 123022692 -127665162 - MER68 LTR ERV1 0 562 2 195 317 106 10 chr2 123022692 123022720 -127665134 + MIR SINE MIR 109 133 -75 405 324 20 20 chr2 123023417 123023565 -127664289 + MIR3 SINE MIR 38 185 -23 193 239 90 15 chr2 123023874 123023941 -127663913 - L2 LINE L2 -1 3312 3241 222 306 47 51 chr2 123024976 123025157 -127662697 - L2 LINE L2 -271 3001 2819 496 216 26 125 chr2 123025175 123025330 -127662524 + L1MC4 LINE L1 7715 7835 -207 2275 75 24 14 chr2 123025330 123025623 -127662231 + AluSg SINE Alu 1 296 -14 496 216 26 125 chr2 123025623 123025731 -127662123 + L1MC4 LINE L1 7835 7952 -90 364 200 95 21 chr2 123026061 123026156 -127661698 + MLT1A2 LTR MaLR 1 102 -272 1378 194 14 39 chr2 123026156 123026439 -127661415 + AluJo SINE Alu 1 276 -36 288 0 0 0 chr2 123026444 123026476 -127661378 + (T)n Simple_repeat Simple_repeat 1 32 0 426 217 36 0 chr2 123026491 123026574 -127661280 + AluS SINE Alu 3 88 -225 1946 74 0 8 chr2 123026597 123026841 -127661013 + AluSg SINE Alu 64 305 -5 847 215 138 42 chr2 123026841 123027101 -127660753 + MLT1A2 LTR MaLR 90 374 0 2230 99 0 32 chr2 123027170 123027484 -127660370 + AluSx SINE Alu 1 304 -8 323 233 3 5 chr2 123027719 123027807 -127660047 + MIR SINE MIR 61 147 -61 212 59 88 0 chr2 123027835 123027869 -127659985 - L2 LINE L2 -5 3308 3272 262 249 85 129 chr2 123027875 123028217 -127659637 - MER102b DNA MER1_type -11 330 4 409 291 55 16 chr2 123029446 123029628 -127658226 + MLT1L LTR MaLR 115 303 -312 384 191 130 119 chr2 123029629 123029922 -127657932 + L1MC5 LINE L1 7616 7911 -50 311 276 9 38 chr2 123030088 123030193 -127657661 + MLT1L LTR MaLR 514 615 0 224 289 0 0 chr2 123030695 123030747 -127657107 + (TG)n Simple_repeat Simple_repeat 1 52 0 181 174 159 0 chr2 123031653 123031722 -127656132 - MIR SINE MIR -125 137 58 189 74 0 0 chr2 123032867 123032894 -127654960 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 21 57 0 0 chr2 123032939 123032974 -127654880 + AT_rich Low_complexity Low_complexity 1 35 0 2048 144 0 7 chr2 123033038 123033343 -127654511 - AluSx SINE Alu -9 303 1 546 236 45 19 chr2 123033912 123034069 -127653785 - L1ME2 LINE L1 -18 6146 5986 256 204 38 121 chr2 123035055 123035187 -127652667 - L1ME2 LINE L1 -427 5694 5574 3631 207 113 9 chr2 123035450 123036344 -127651510 + L1MD2 LINE L1 5372 6358 -1 386 233 78 0 chr2 123036683 123036799 -127651055 - MIR SINE MIR -56 206 82 24 53 0 0 chr2 123039187 123039225 -127648629 + GC_rich Low_complexity Low_complexity 1 38 0 2431 51 7 3 chr2 123039896 123040192 -127647662 + AluY SINE Alu 1 297 -14 2247 69 0 0 chr2 123040194 123040470 -127647384 + AluSc SINE Alu 25 300 -9 22 0 0 0 chr2 123040862 123040884 -127646970 + AT_rich Low_complexity Low_complexity 1 22 0 2430 164 90 14 chr2 123040932 123041431 -127646423 + L1MC3 LINE L1 7147 7683 -102 511 185 109 0 chr2 123041972 123042091 -127645763 + MIR SINE MIR 106 237 -25 845 165 41 24 chr2 123042093 123042263 -127645591 + LTR54 LTR ERV1 327 499 -11 206 281 78 60 chr2 123042300 123042467 -127645387 + L2 LINE L2 3142 3311 -2 1972 127 37 3 chr2 123043110 123043410 -127644444 - AluSx SINE Alu -2 310 1 1727 149 0 52 chr2 123043568 123043876 -127643978 + AluJb SINE Alu 1 292 -20 1668 165 3 42 chr2 123044234 123044543 -127643311 - AluJb SINE Alu -15 297 1 2258 126 45 25 chr2 123044729 123045086 -127642768 - THE1B LTR MaLR 0 364 1 195 250 62 115 chr2 123046001 123046036 -127641818 + L2 LINE L2 3128 3163 -109 448 192 88 16 chr2 123046036 123046161 -127641693 + MER94 DNA DNA 1 134 0 195 250 62 115 chr2 123046161 123046221 -127641633 + L2 LINE L2 3163 3218 -54 636 132 99 0 chr2 123047358 123047479 -127640375 - L1M4 LINE L1 -2430 3716 3584 1647 109 25 109 chr2 123047501 123047682 -127640172 - AluSx SINE Alu -19 293 149 1951 119 7 34 chr2 123047682 123047976 -127639878 - AluSg SINE Alu -24 286 1 1647 109 25 109 chr2 123047976 123048114 -127639740 - AluSx SINE Alu -163 149 1 239 299 108 30 chr2 123048252 123048419 -127639435 - L1ME LINE L1 -354 5767 5588 1919 126 3 11 chr2 123048864 123049149 -127638705 - AluSx SINE Alu -29 283 1 825 225 45 112 chr2 123049790 123050176 -127637678 + MSTC LTR MaLR 1 355 -73 803 126 7 37 chr2 123050176 123050311 -127637543 - FLAM_C SINE Alu -2 131 1 825 225 45 112 chr2 123050311 123050369 -127637485 + MSTC LTR MaLR 355 415 -13 2193 121 10 0 chr2 123051261 123051559 -127636295 + AluSq SINE Alu 1 301 -12 366 191 11 80 chr2 123052105 123052293 -127635561 + C-rich Low_complexity Low_complexity 4 178 0 361 281 72 61 chr2 123052393 123052656 -127635198 - MLT1L LTR MaLR -327 288 23 190 275 87 0 chr2 123052685 123052754 -127635100 - L2 LINE L2 -90 3223 3149 291 257 184 0 chr2 123052977 123053086 -127634768 + MIR3 SINE MIR 67 195 -13 1871 120 17 17 chr2 123053472 123053763 -127634091 - AluSx SINE Alu -9 303 13 244 323 30 22 chr2 123054909 123055110 -127632744 + MIR SINE MIR 8 259 -3 303 213 83 37 chr2 123055129 123055237 -127632617 - L2 LINE L2 -1 3312 3200 1996 194 84 76 chr2 123055844 123055928 -127631926 - L1MC4 LINE L1 -280 7762 7680 2289 61 10 10 chr2 123055928 123056222 -127631632 - AluY SINE Alu -17 294 1 2279 80 10 0 chr2 123056222 123056510 -127631344 - AluSp SINE Alu -22 291 1 1996 194 84 76 chr2 123056510 123056588 -127631266 - L1MC4 LINE L1 -362 7680 7604 2232 96 3 22 chr2 123056588 123056901 -127630953 - AluSq SINE Alu -6 307 1 1996 194 84 76 chr2 123056901 123057293 -127630561 - L1MC4 LINE L1 -438 7604 7198 2254 70 30 3 chr2 123057293 123057591 -127630263 + AluY SINE Alu 1 306 -5 1996 194 84 76 chr2 123057591 123057666 -127630188 - L1MC4 LINE L1 -844 7198 7125 5594 140 21 21 chr2 123057982 123058632 -127629222 - L1 LINE L1 -1112 5034 4385 2163 136 0 0 chr2 123058632 123058940 -127628914 - AluSx SINE Alu -4 308 1 5594 140 21 21 chr2 123058940 123059265 -127628589 - L1 LINE L1 -1761 4385 4056 2291 95 7 3 chr2 123059265 123059560 -127628294 + AluSg SINE Alu 3 298 -12 5594 140 21 21 chr2 123059560 123059610 -127628244 - L1 LINE L1 -2089 4057 4008 2326 114 0 3 chr2 123060296 123060603 -127627251 - AluSx SINE Alu -6 306 1 2137 123 10 3 chr2 123060635 123060943 -127626911 - AluSx SINE Alu -2 310 1 2249 122 0 0 chr2 123061227 123061530 -127626324 - AluSg SINE Alu -7 303 1 484 202 194 0 chr2 123062028 123062152 -127625702 + MIR SINE MIR 1 148 -114 26 0 0 0 chr2 123063256 123063282 -127624572 + AT_rich Low_complexity Low_complexity 1 26 0 1142 182 59 0 chr2 123063283 123063452 -127624402 - AluSg/x SINE Alu -11 301 117 216 67 0 0 chr2 123063452 123063482 -127624372 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1142 182 59 0 chr2 123063482 123063515 -127624339 - AluSg/x SINE Alu -195 117 87 354 225 21 120 chr2 123064990 123065132 -127622722 - L2 LINE L2 -1 3312 3185 212 351 36 18 chr2 123065162 123065273 -127622581 - L2 LINE L2 -232 3081 2969 269 339 41 41 chr2 123065317 123065512 -127622342 - L2 LINE L2 -423 2891 2697 1957 123 46 3 chr2 123065521 123065806 -127622048 + AluSx SINE Alu 1 297 -15 407 179 0 0 chr2 123065806 123065884 -127621970 + L1 LINE L1 2531 2608 -3538 1685 125 0 12 chr2 123065884 123066124 -127621730 + AluSx SINE Alu 1 237 -75 2317 77 0 0 chr2 123066255 123066540 -127621314 + AluY SINE Alu 10 294 -17 862 137 0 15 chr2 123066711 123066842 -127621012 + AluSq/x SINE Alu 1 129 -184 2084 132 7 0 chr2 123067062 123067357 -127620497 - AluSx SINE Alu -15 297 1 841 232 19 0 chr2 123067713 123067920 -127619934 + L1MD2 LINE L1 6134 6344 -15 799 116 136 39 chr2 123068032 123068187 -127619667 + L1MA8 LINE L1 5957 6126 -165 2049 80 4 0 chr2 123068191 123068442 -127619412 + AluY SINE Alu 47 298 -13 2394 97 0 0 chr2 123068450 123068750 -127619104 + AluSx SINE Alu 1 300 -12 249 315 169 11 chr2 123069109 123069287 -127618567 - MIR SINE MIR -14 248 43 488 283 78 0 chr2 123070375 123070555 -127617299 + MIR SINE MIR 47 240 -22 923 221 83 86 chr2 123070598 123070937 -127616917 - MER46C DNA MER2_type 0 338 1 661 203 37 37 chr2 123071624 123071787 -127616067 + MER58B DNA MER1_type 179 341 0 6720 108 22 28 chr2 123072012 123072187 -127615667 + L1MA5A LINE L1 5084 5259 -1038 620 101 45 0 chr2 123072187 123072276 -127615578 - HY4 scRNA scRNA 0 93 1 6720 108 22 28 chr2 123072276 123073311 -127614543 + L1MA5A LINE L1 5259 6287 -10 309 129 14 29 chr2 123073499 123073569 -127614285 + AluJ/FLAM SINE Alu 1 69 -233 2440 74 0 0 chr2 123074496 123074794 -127613060 - AluSg SINE Alu -12 298 1 250 182 20 30 chr2 123076166 123076265 -127611589 + A-rich Low_complexity Low_complexity 3 100 0 2148 103 24 0 chr2 123076551 123076843 -127611011 - AluSx SINE Alu -13 299 1 254 289 0 12 chr2 123077020 123077103 -127610751 - MIR SINE MIR -99 163 82 229 288 14 14 chr2 123077555 123077628 -127610226 - L2 LINE L2 -1 3271 3199 495 192 17 50 chr2 123077893 123078013 -127609841 - L1MC5 LINE L1 -1131 6830 6715 601 197 72 64 chr2 123078106 123078355 -127609499 + L1MC5 LINE L1 6926 7176 -785 965 234 40 36 chr2 123078359 123078663 -127609191 + L1MC5 LINE L1 7603 7907 -54 299 263 43 6 chr2 123078709 123078842 -127609012 + L1MC/D LINE L1 5685 5821 -344 1496 182 39 39 chr2 123079229 123079356 -127608498 + AluJo SINE Alu 1 127 -185 234 91 0 0 chr2 123079356 123079389 -127608465 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 1640 188 0 7 chr2 123079389 123079671 -127608183 - AluJb SINE Alu -32 280 1 1496 182 39 39 chr2 123079671 123079686 -127608168 + AluJo SINE Alu 126 140 -172 249 57 0 0 chr2 123079686 123079721 -127608133 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1496 182 39 39 chr2 123079721 123079883 -127607971 + AluJo SINE Alu 139 307 -5 2382 82 7 0 chr2 123079884 123080178 -127607676 + AluSc SINE Alu 1 296 -13 304 80 100 0 chr2 123080351 123080401 -127607453 - L1MB7 LINE L1 -25 6159 6105 921 167 46 0 chr2 123080777 123080951 -127606903 - L1MB7 LINE L1 -35 6149 5968 356 261 144 52 chr2 123081860 123082151 -127605703 - L1ME4a LINE L1 -77 6044 5727 2529 47 6 9 chr2 123082692 123083009 -127604845 - AluYb8 SINE Alu -2 316 1 1598 190 14 3 chr2 123083038 123083333 -127604521 + AluJb SINE Alu 1 298 -14 1338 174 87 0 chr2 123083335 123083577 -127604277 + AluSq SINE Alu 3 265 -48 322 320 0 33 chr2 123083633 123083755 -127604099 + C-rich Low_complexity Low_complexity 2 119 0 1584 185 4 0 chr2 123083947 123084223 -127603631 + AluJb SINE Alu 15 291 -21 2193 86 14 0 chr2 123086325 123086605 -127601249 + AluSx SINE Alu 5 288 -24 2191 121 10 0 chr2 123086605 123086902 -127600952 + AluSx SINE Alu 1 300 -12 205 343 81 35 chr2 123087445 123087643 -127600211 - L3 LINE CR1 -60 1517 1311 604 251 212 34 chr2 123087839 123088305 -127599549 + MLT1H1 LTR MaLR 2 550 -5 257 298 97 8 chr2 123088487 123088611 -127599243 - MIR SINE MIR -56 206 72 2213 94 10 0 chr2 123089206 123089503 -127598351 + AluSg SINE Alu 1 300 -10 460 207 4 15 chr2 123089709 123089983 -127597871 + GA-rich Low_complexity Low_complexity 1 271 0 570 226 0 0 chr2 123090004 123090547 -127597307 + GA-rich Low_complexity Low_complexity 1 543 0 198 225 0 0 chr2 123090560 123090640 -127597214 + GA-rich Low_complexity Low_complexity 3 82 0 465 217 0 0 chr2 123090660 123090835 -127597019 + GA-rich Low_complexity Low_complexity 1 175 0 324 254 0 0 chr2 123090848 123091025 -127596829 + GA-rich Low_complexity Low_complexity 3 179 0 429 230 0 0 chr2 123091056 123091234 -127596620 + GA-rich Low_complexity Low_complexity 1 178 0 461 249 0 6 chr2 123091263 123091797 -127596057 + GA-rich Low_complexity Low_complexity 1 530 0 1475 109 0 5 chr2 123091897 123092098 -127595756 + AluSc SINE Alu 101 300 -9 268 326 82 0 chr2 123092415 123092550 -127595304 - MIR SINE MIR -58 204 59 186 118 0 0 chr2 123092550 123092584 -127595270 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 775 162 0 0 chr2 123092586 123092703 -127595151 - FLAM_C SINE Alu -16 117 1 562 163 10 0 chr2 123093172 123093270 -127594584 + L1MD2 LINE L1 6248 6346 -13 189 238 48 0 chr2 123093341 123093383 -127594471 - L2 LINE L2 -20 3252 3209 2107 137 7 0 chr2 123094372 123094671 -127593183 + AluSx SINE Alu 1 301 -11 225 271 86 0 chr2 123094688 123094758 -127593096 + L1ME4a LINE L1 5513 5588 -2220 258 27 0 0 chr2 123094844 123094881 -127592973 + AluY SINE Alu 262 298 -4 361 233 31 106 chr2 123094980 123095089 -127592765 + L1ME4a LINE L1 5733 5849 -272 2414 91 3 0 chr2 123095089 123095397 -127592457 + AluY SINE Alu 2 310 -1 361 233 31 106 chr2 123095397 123095487 -127592367 + L1ME4a LINE L1 5849 5906 -215 2316 104 0 13 chr2 123095487 123095804 -127592050 + AluSq SINE Alu 1 313 0 361 233 31 106 chr2 123095804 123095895 -127591959 + L1ME4a LINE L1 5906 6002 -119 2087 121 10 3 chr2 123095900 123096197 -127591657 - AluSx SINE Alu -13 299 1 402 21 0 0 chr2 123096359 123096406 -127591448 + (CA)n Simple_repeat Simple_repeat 2 48 0 2263 105 14 0 chr2 123096559 123096853 -127591001 + AluSq SINE Alu 1 298 -15 1869 143 16 46 chr2 123096855 123096991 -127590863 + AluJb SINE Alu 1 139 -173 2174 112 0 0 chr2 123096991 123097313 -127590541 + AluSx SINE Alu 1 322 0 1869 143 16 46 chr2 123097313 123097481 -127590373 + AluJb SINE Alu 139 298 -14 756 243 80 75 chr2 123097529 123097842 -127590012 + L1MC4a LINE L1 5574 5891 -1917 2231 123 3 0 chr2 123097842 123098143 -127589711 + AluSp SINE Alu 2 303 -10 756 243 80 75 chr2 123098143 123098191 -127589663 + L1MC4a LINE L1 5891 5937 -1871 264 122 0 0 chr2 123098192 123098233 -127589621 + (TG)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr2 123098234 123098255 -127589599 + AT_rich Low_complexity Low_complexity 1 21 0 2346 62 31 3 chr2 123098951 123099240 -127588614 + AluY SINE Alu 1 297 -14 782 201 0 46 chr2 123100282 123100456 -127587398 + FRAM SINE Alu 1 166 0 754 192 0 0 chr2 123101147 123101277 -127586577 + FLAM_C SINE Alu 2 131 -12 1999 135 3 0 chr2 123101283 123101603 -127586251 + AluSg SINE Alu 1 321 0 2151 101 0 3 chr2 123101613 123101899 -127585955 + AluSq SINE Alu 6 290 -23 30 0 0 0 chr2 123101903 123101933 -127585921 + AT_rich Low_complexity Low_complexity 1 30 0 2730 167 8 64 chr2 123102595 123102831 -127585023 + L1MB4 LINE L1 4901 5149 -1025 2007 146 0 14 chr2 123102831 123103126 -127584728 + AluSx SINE Alu 6 296 -16 2730 167 8 64 chr2 123103126 123103884 -127583970 + L1MB4 LINE L1 5149 5824 -350 21 0 0 0 chr2 123103890 123103911 -127583943 + AT_rich Low_complexity Low_complexity 1 21 0 1765 68 0 5 chr2 123104014 123104235 -127583619 + AluY SINE Alu 92 311 0 1737 146 12 31 chr2 123104235 123104507 -127583347 + L1MB4 LINE L1 5863 6139 -41 2180 115 3 10 chr2 123104507 123104811 -127583043 + AluSp SINE Alu 1 302 -11 3843 85 0 0 chr2 123104811 123105307 -127582547 + L1PA6 LINE L1 5655 6150 -4 1737 146 12 31 chr2 123105307 123105355 -127582499 + L1MB4 LINE L1 6137 6178 -2 331 324 60 16 chr2 123105653 123105838 -127582016 + MIR SINE MIR 53 245 -17 193 208 42 21 chr2 123106217 123106265 -127581589 - MER5A DNA MER1_type -5 184 136 333 281 68 35 chr2 123106614 123106808 -127581046 + L1ME LINE L1 5410 5619 -502 754 150 23 30 chr2 123106808 123106941 -127580913 + FLAM_A SINE Alu 1 132 -1 333 281 68 35 chr2 123106941 123107056 -127580798 + L1ME LINE L1 5619 5729 -392 1768 147 68 10 chr2 123107068 123107360 -127580494 + AluJo SINE Alu 4 312 0 2206 107 3 0 chr2 123107380 123107669 -127580185 + AluSx SINE Alu 1 290 -22 227 289 33 50 chr2 123108183 123108304 -127579550 + L3 LINE CR1 844 962 -615 195 258 30 15 chr2 123108769 123108835 -127579019 + MER5B DNA MER1_type 6 72 -106 639 195 24 86 chr2 123108954 123109164 -127578690 - MIR SINE MIR -8 254 58 1975 105 3 21 chr2 123109297 123109583 -127578271 + AluSx SINE Alu 1 281 -31 1766 134 7 51 chr2 123109618 123109910 -127577944 + AluJb SINE Alu 29 307 -5 225 265 44 0 chr2 123110018 123110086 -127577768 + L2 LINE L2 3139 3209 -63 325 311 49 18 chr2 123110145 123110309 -127577545 + L3 LINE CR1 1234 1402 -175 1635 192 24 7 chr2 123111045 123111337 -127576517 - AluJb SINE Alu -15 297 1 2474 69 0 10 chr2 123111685 123111990 -127575864 + AluY SINE Alu 1 302 -9 2325 116 0 0 chr2 123112015 123112326 -127575528 + AluSq SINE Alu 1 311 -2 21 71 0 0 chr2 123112947 123112989 -127574865 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr2 123113462 123113492 -127574362 + AT_rich Low_complexity Low_complexity 1 30 0 249 33 0 0 chr2 123114393 123114423 -127573431 + (A)n Simple_repeat Simple_repeat 1 30 0 1844 134 3 20 chr2 123115211 123115510 -127572344 - AluJb SINE Alu -18 294 1 1871 167 65 8 chr2 123116112 123116551 -127571303 - L1MB2 LINE L1 -17 6163 5667 554 134 41 10 chr2 123116566 123116663 -127571191 + HY1 scRNA scRNA 12 111 -1 2033 130 11 0 chr2 123116702 123116986 -127570868 + AluSx SINE Alu 1 287 -25 2115 89 32 4 chr2 123117106 123117386 -127570468 - AluSc SINE Alu -21 288 1 184 122 41 61 chr2 123117442 123117491 -127570363 - L2 LINE L2 -9 3263 3216 399 298 8 8 chr2 123118026 123118150 -127569704 - MIR SINE MIR -63 145 22 2116 275 91 22 chr2 123118321 123119173 -127568681 - L2 LINE L2 -33 3280 2340 1695 159 79 0 chr2 123119173 123119450 -127568404 + AluJb SINE Alu 1 299 -13 2116 275 91 22 chr2 123119450 123119606 -127568248 - L2 LINE L2 -973 2340 2196 305 248 73 15 chr2 123119769 123119906 -127567948 - L2 LINE L2 -1441 1873 1729 736 128 6 98 chr2 123120051 123120156 -127567698 - L1MB8 LINE L1 0 6178 6092 1686 139 77 0 chr2 123120156 123120429 -127567425 + AluJb SINE Alu 5 298 -14 736 128 6 98 chr2 123120429 123120487 -127567367 - L1MB8 LINE L1 -86 6092 6030 559 85 98 0 chr2 123120490 123120572 -127567282 + L1MC1 LINE L1 6136 6225 -108 342 0 0 0 chr2 123120590 123120628 -127567226 + (TG)n Simple_repeat Simple_repeat 1 38 0 1508 158 89 0 chr2 123120637 123120896 -127566958 - AluJb SINE Alu -30 282 1 2039 127 3 26 chr2 123120903 123121211 -127566643 - AluJb SINE Alu -9 303 3 912 188 111 57 chr2 123121213 123121382 -127566472 - L1M4 LINE L1 -2249 3897 3704 1837 185 0 0 chr2 123121382 123121674 -127566180 + AluJb SINE Alu 1 292 -20 912 188 111 57 chr2 123121674 123121802 -127566052 - L1M4 LINE L1 -2442 3704 3584 208 167 0 71 chr2 123122150 123122234 -127565620 + GA-rich Low_complexity Low_complexity 1 78 0 368 299 8 0 chr2 123122249 123122366 -127565488 + GA-rich Low_complexity Low_complexity 2 119 0 23 0 0 0 chr2 123123378 123123401 -127564453 + AT_rich Low_complexity Low_complexity 1 23 0 926 255 56 81 chr2 123123574 123123971 -127563883 - MLT1H LTR MaLR -40 509 80 2291 122 0 0 chr2 123123971 123124282 -127563572 + AluSx SINE Alu 1 311 -1 926 255 56 81 chr2 123124282 123124360 -127563494 - MLT1H LTR MaLR -469 80 2 2270 96 3 3 chr2 123124815 123125116 -127562738 + AluSx SINE Alu 1 301 -11 252 227 30 15 chr2 123125193 123125259 -127562595 - MIR SINE MIR -92 170 104 1936 147 39 0 chr2 123125272 123125558 -127562296 + AluSg SINE Alu 1 297 -13 279 302 21 10 chr2 123125601 123125697 -127562157 - MIR SINE MIR -161 101 5 2418 79 3 3 chr2 123125922 123126225 -127561629 + AluSq SINE Alu 1 303 -10 182 308 58 10 chr2 123126902 123127006 -127560848 + L2 LINE L2 598 706 -2608 896 305 137 16 chr2 123127012 123127654 -127560200 + L2 LINE L2 1566 2285 -1029 628 322 93 46 chr2 123127634 123128022 -127559832 + L2 LINE L2 2866 3271 -1 * 308 226 45 53 chr2 123128975 123129108 -127558746 + L1ME4a LINE L1 5990 6121 0 341 230 40 20 chr2 123129591 123129691 -127558163 + L1MC5 LINE L1 7808 7909 -52 1867 138 13 7 chr2 123129697 123129995 -127557859 + AluSx SINE Alu 1 300 -12 4822 206 59 27 chr2 123130059 123130116 -127557738 - L1M4 LINE L1 -728 5450 5396 1945 122 7 0 chr2 123130116 123130402 -127557452 - AluSc SINE Alu -21 288 1 4822 206 59 27 chr2 123130402 123130700 -127557154 - L1M4 LINE L1 -782 5396 5109 1556 171 37 13 chr2 123130700 123130999 -127556855 + AluJb SINE Alu 1 306 -6 4822 206 59 27 chr2 123130999 123131055 -127556799 - L1M4 LINE L1 -1069 5109 5056 861 135 8 15 chr2 123131055 123131188 -127556666 - FLAM_C SINE Alu -1 132 1 4822 206 59 27 chr2 123131188 123131592 -127556262 - L1M4 LINE L1 -1122 5056 4666 1981 124 23 10 chr2 123131592 123131898 -127555956 - AluSx SINE Alu -2 310 1 4822 206 59 27 chr2 123131898 123132043 -127555811 - L1M4 LINE L1 -1512 4666 4527 1871 145 10 0 chr2 123132043 123132339 -127555515 + AluJb SINE Alu 1 299 -13 4822 206 59 27 chr2 123132339 123132666 -127555188 - L1M4 LINE L1 -1651 4527 4111 857 142 0 0 chr2 123132696 123132823 -127555031 + AluJb SINE Alu 1 127 -185 29 0 0 0 chr2 123132825 123132854 -127555000 + AT_rich Low_complexity Low_complexity 1 29 0 3052 216 40 126 chr2 123132861 123133493 -127554361 - L1M4 LINE L1 -2061 4085 3400 726 184 0 0 chr2 123133493 123133618 -127554236 + AluSg/x SINE Alu 174 298 -14 3052 216 40 126 chr2 123133618 123134156 -127553698 - L1M4 LINE L1 -2746 3400 2817 2038 111 3 25 chr2 123134156 123134471 -127553383 - AluSx SINE Alu -4 308 1 3052 216 40 126 chr2 123134471 123134495 -127553359 - L1M4 LINE L1 -3329 2817 2793 566 123 53 35 chr2 123134495 123134609 -127553245 - L1MB3 LINE L1 0 6183 6068 3052 216 40 126 chr2 123134609 123134917 -127552937 - L1M4 LINE L1 -3353 2793 2641 1458 92 0 0 chr2 123135182 123135377 -127552477 - AluSg/x SINE Alu -5 307 113 301 220 0 0 chr2 123135517 123135567 -127552287 - AluSc SINE Alu -116 183 134 1881 223 101 28 chr2 123135567 123135592 -127552262 + L1ME1 LINE L1 5576 5598 -568 2364 64 3 0 chr2 123135592 123135888 -127551966 + AluSp SINE Alu 1 297 -16 1881 223 101 28 chr2 123135888 123135956 -127551898 + L1ME1 LINE L1 5598 5660 -506 2756 13 0 3 chr2 123135956 123136270 -127551584 + AluYb8 SINE Alu 3 315 -3 1881 223 101 28 chr2 123136270 123136721 -127551133 + L1ME1 LINE L1 5660 6161 -5 2131 66 3 18 chr2 123136741 123137068 -127550786 + AluY SINE Alu 1 323 0 1786 130 25 0 chr2 123137068 123137377 -127550477 + AluSx SINE Alu 1 316 0 257 260 27 14 chr2 123137540 123137613 -127550241 + MER5B DNA MER1_type 3 76 -102 213 257 27 54 chr2 123137829 123137903 -127549951 + L2 LINE L2 3147 3218 -95 373 167 28 0 chr2 123138177 123138249 -127549605 - U13 snRNA snRNA -2 102 29 1745 197 190 0 chr2 123138437 123138873 -127548981 + L1ME1 LINE L1 5420 5938 -228 1202 110 0 6 chr2 123138874 123139047 -127548807 + AluSg/x SINE Alu 132 303 -7 906 199 17 0 chr2 123139050 123139226 -127548628 + L1ME1 LINE L1 5931 6109 -57 1942 111 18 0 chr2 123139240 123139519 -127548335 + AluSx SINE Alu 14 297 -15 207 139 0 0 chr2 123140355 123140391 -127547463 + (T)n Simple_repeat Simple_repeat 1 36 0 204 122 0 0 chr2 123140945 123140986 -127546868 + (CAT)n Simple_repeat Simple_repeat 1 41 0 2194 112 3 0 chr2 123141359 123141664 -127546190 - AluSp SINE Alu -7 306 1 753 175 56 0 chr2 123141672 123141798 -127546056 - FLAM_A SINE Alu 0 133 1 1093 281 80 9 chr2 123141852 123142190 -127545664 - MLT1K LTR MaLR -17 571 210 431 181 9 38 chr2 123143424 123143529 -127544325 - HsTC2 DNA Tc2 -1 1897 1796 2058 90 42 14 chr2 123143589 123143877 -127543977 + AluSx SINE Alu 1 296 -16 2141 97 0 13 chr2 123144243 123144554 -127543300 - AluY SINE Alu -4 307 1 1955 106 23 13 chr2 123144931 123145233 -127542621 + AluSx SINE Alu 1 305 -7 1990 248 206 21 chr2 123145276 123145826 -127542028 + L2 LINE L2 1879 2326 -988 1796 130 34 10 chr2 123145826 123146119 -127541735 - AluJo SINE Alu -12 300 1 1990 248 206 21 chr2 123146119 123146438 -127541416 + L2 LINE L2 2326 2909 -405 861 172 7 0 chr2 123146440 123146591 -127541263 + FRAM SINE Alu 17 168 -8 1055 191 105 67 chr2 123146607 123146838 -127541016 + L2 LINE L2 2925 3177 -136 2041 128 0 6 chr2 123146838 123147150 -127540704 - AluSx SINE Alu -2 310 1 1055 191 105 67 chr2 123147150 123147289 -127540565 + L2 LINE L2 3177 3309 -4 187 190 276 0 chr2 123147287 123147345 -127540509 - L2 LINE L2 0 3313 3240 * 2010 121 3 0 chr2 123147722 123148019 -127539835 + AluSp SINE Alu 3 300 -13 1833 119 25 0 chr2 123148946 123149277 -127538577 - AluSx SINE Alu 0 338 1 23 0 0 0 chr2 123149339 123149362 -127538492 + AT_rich Low_complexity Low_complexity 1 23 0 1469 186 7 0 chr2 123149365 123149495 -127538359 + AluJo SINE Alu 2 130 -182 1964 103 20 27 chr2 123149495 123149796 -127538058 + AluSq SINE Alu 1 299 -14 1469 186 7 0 chr2 123149796 123149944 -127537910 + AluJo SINE Alu 130 282 -30 186 71 0 0 chr2 123149947 123149975 -127537879 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 742 185 0 0 chr2 123149984 123150103 -127537751 + FLAM_C SINE Alu 2 120 -23 198 0 0 0 chr2 123150105 123150127 -127537727 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2010 94 7 0 chr2 123150377 123150653 -127537201 + AluSq SINE Alu 1 278 -35 2151 109 0 0 chr2 123150653 123150947 -127536907 + AluSx SINE Alu 1 294 -18 250 283 0 0 chr2 123151034 123151094 -127536760 - AluSc SINE Alu -110 189 130 2029 128 7 0 chr2 123151304 123151610 -127536244 + AluSx SINE Alu 1 308 -4 618 209 0 44 chr2 123151641 123151799 -127536055 - FRAM SINE Alu -9 167 17 286 180 0 0 chr2 123151921 123151971 -127535883 + MIR SINE MIR 92 141 -121 2102 102 0 10 chr2 123152034 123152337 -127535517 - AluSg SINE Alu -10 300 1 1072 126 13 0 chr2 123152453 123152612 -127535242 - AluSg/x SINE Alu -16 294 134 2101 115 0 0 chr2 123152614 123152910 -127534944 - AluSp SINE Alu -13 300 5 1994 133 0 10 chr2 123153005 123153305 -127534549 - AluSx SINE Alu -15 297 1 2195 106 3 6 chr2 123153308 123153619 -127534235 - AluSp SINE Alu -2 311 2 269 122 49 0 chr2 123153634 123153675 -127534179 - MER57A LTR ERV1 -66 337 295 906 143 36 10 chr2 123153684 123153880 -127533974 - L1M4 LINE L1 -981 5165 4965 360 0 0 0 chr2 123153917 123153957 -127533897 + (TA)n Simple_repeat Simple_repeat 2 41 0 2072 82 11 0 chr2 123153958 123154237 -127533617 - AluSx SINE Alu -30 282 1 4679 211 67 28 chr2 123154240 123155209 -127532645 - Cheshire DNA MER1_type -400 2020 998 456 272 18 26 chr2 123155209 123155323 -127532531 + MER81 DNA DNA 2 114 0 4679 211 67 28 chr2 123155323 123155501 -127532353 - Cheshire DNA MER1_type -1422 998 828 1311 195 42 0 chr2 123155501 123155792 -127532062 + AluJb SINE Alu 11 312 0 691 155 70 0 chr2 123155792 123155921 -127531933 - Cheshire DNA MER1_type -1584 836 699 1326 153 6 102 chr2 123155950 123156283 -127531571 - AluSp SINE Alu -12 301 1 2143 112 0 3 chr2 123156285 123156597 -127531257 - AluY SINE Alu 0 311 1 964 104 0 8 chr2 123156601 123156735 -127531119 - AluSq/x SINE Alu -179 133 1 272 200 62 50 chr2 123156735 123156815 -127531039 - Cheshire DNA MER1_type -1758 662 582 * 681 250 91 0 chr2 123156808 123156984 -127530870 - Cheshire DNA MER1_type -2094 326 135 738 167 8 15 chr2 123157393 123157525 -127530329 + FLAM_C SINE Alu 6 136 -7 1919 123 10 7 chr2 123157615 123157908 -127529946 + AluSx SINE Alu 1 294 -18 200 231 58 0 chr2 123158109 123158161 -127529693 - L2 LINE L2 -3 3310 3256 1550 96 5 0 chr2 123158318 123158536 -127529318 - AluSp SINE Alu -10 303 85 1535 179 3 21 chr2 123158565 123158727 -127529127 - AluJo SINE Alu -16 296 140 2178 98 3 0 chr2 123158727 123159022 -127528832 - AluSc SINE Alu -13 296 1 1535 179 3 21 chr2 123159022 123159149 -127528705 - AluJo SINE Alu -172 140 12 21 57 0 0 chr2 123159888 123159923 -127527931 + AT_rich Low_complexity Low_complexity 1 35 0 2169 89 0 25 chr2 123161288 123161602 -127526252 + AluSg SINE Alu 1 306 -4 837 215 0 0 chr2 123161778 123161941 -127525913 - FRAM SINE Alu -17 159 1 1960 121 0 17 chr2 123162139 123162457 -127525397 + AluSx SINE Alu 1 313 0 2273 65 7 0 chr2 123162463 123162755 -127525099 + AluSp SINE Alu 5 298 -15 1640 125 4 4 chr2 123162771 123163011 -127524843 + AluSx SINE Alu 1 240 -72 258 159 0 19 chr2 123163389 123163441 -127524413 + AluSg SINE Alu 1 35 -268 330 269 31 88 chr2 123163910 123164103 -127523751 + L2 LINE L2 2935 3116 -156 194 344 86 33 chr2 123164745 123164896 -127522958 + MIR3 SINE MIR 34 192 -16 938 93 23 0 chr2 123164910 123165039 -127522815 + AluSq/x SINE Alu 1 132 -181 1847 116 0 4 chr2 123165043 123165302 -127522552 + AluSg SINE Alu 35 292 -18 1877 112 0 21 chr2 123165305 123165441 -127522413 + AluSx SINE Alu 1 138 -174 2085 131 0 0 chr2 123165441 123165738 -127522116 + AluSx SINE Alu 1 297 -15 1877 112 0 21 chr2 123165738 123165887 -127521967 + AluSx SINE Alu 138 280 -32 224 29 0 29 chr2 123165889 123165923 -127521931 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 362 244 34 50 chr2 123165926 123166045 -127521809 - MER112 DNA MER1_type -96 164 48 1515 130 0 47 chr2 123166210 123166464 -127521390 + AluSq SINE Alu 1 242 -71 21 0 0 0 chr2 123166608 123166629 -127521225 + AT_rich Low_complexity Low_complexity 1 21 0 236 191 15 29 chr2 123166631 123166699 -127521155 + (TA)n Simple_repeat Simple_repeat 1 67 0 2041 95 0 10 chr2 123166719 123167015 -127520839 + AluSg SINE Alu 1 293 -17 445 308 156 5 chr2 123167286 123167510 -127520344 - MIR SINE MIR 0 262 5 188 75 0 75 chr2 123169146 123169186 -127518668 + (CGAGG)n Simple_repeat Simple_repeat 4 40 0 214 242 33 66 chr2 123169243 123169425 -127518429 + (CGGGG)n Simple_repeat Simple_repeat 4 179 0 * 285 306 0 32 chr2 123169293 123169479 -127518375 + G-rich Low_complexity Low_complexity 1 180 0 2075 50 6 99 chr2 123169647 123169969 -127517885 - AluSq SINE Alu -21 292 1 2231 91 0 13 chr2 123170403 123170711 -127517143 - AluSx SINE Alu -8 304 1 312 27 0 0 chr2 123171843 123171880 -127515974 + (TG)n Simple_repeat Simple_repeat 1 37 0 384 206 93 21 chr2 123172106 123172203 -127515651 - MER5A DNA MER1_type -76 113 10 521 232 41 61 chr2 123172257 123172375 -127515479 + MLT1C LTR MaLR 11 130 -375 2208 104 3 0 chr2 123172375 123172674 -127515180 + AluSx SINE Alu 1 300 -12 521 232 41 61 chr2 123172674 123172889 -127514965 + MLT1C LTR MaLR 130 497 -8 260 151 0 19 chr2 123173025 123173078 -127514776 + CT-rich Low_complexity Low_complexity 4 55 0 238 258 47 0 chr2 123173143 123173228 -127514626 - MER20B DNA MER1_type -21 198 106 1736 169 37 11 chr2 123173638 123173987 -127513867 - MLT1A1 LTR MaLR -2 363 6 281 273 101 7 chr2 123174797 123174936 -127512918 + L1ME LINE L1 5639 5790 -331 22 0 0 0 chr2 123174970 123174992 -127512862 + AT_rich Low_complexity Low_complexity 1 22 0 1523 215 19 3 chr2 123174992 123175304 -127512550 + L1PB4 LINE L1 5801 6117 -39 724 229 11 21 chr2 123175415 123175603 -127512251 - AluJb SINE Alu -7 305 120 22 0 0 0 chr2 123175603 123175625 -127512229 + AT_rich Low_complexity Low_complexity 1 22 0 242 49 0 49 chr2 123175858 123175899 -127511955 + (TTTCC)n Simple_repeat Simple_repeat 5 43 0 1292 112 0 0 chr2 123175899 123176086 -127511768 - AluSq SINE Alu 0 313 127 278 264 38 63 chr2 123176263 123176422 -127511432 + L1M4 LINE L1 3521 3675 -2471 6814 75 32 3 chr2 123176501 123177943 -127509911 - L1PA7 LINE L1 0 6154 4672 1021 117 0 0 chr2 123177943 123178088 -127509766 - AluSq SINE Alu -167 145 1 266 300 100 0 chr2 123178416 123178546 -127509308 + MER20B DNA MER1_type 15 157 -626 242 0 0 0 chr2 123178852 123178880 -127508974 + MLT1J2 LTR MaLR 396 423 -27 1712 150 11 14 chr2 123179167 123179298 -127508556 + AluJb SINE Alu 6 136 -176 2141 114 0 0 chr2 123179298 123179596 -127508258 + AluSq SINE Alu 1 298 -15 1712 150 11 14 chr2 123179596 123179751 -127508103 + AluJb SINE Alu 136 291 -21 7795 186 70 38 chr2 123179754 123180399 -127507455 + L1MDa LINE L1 284 907 -5633 2041 156 16 38 chr2 123180399 123180770 -127507084 + MLT1A1 LTR MaLR 1 363 -2 7795 186 70 38 chr2 123180770 123181216 -127506638 + L1MDa LINE L1 907 1337 -5203 1871 156 7 0 chr2 123181216 123181517 -127506337 + AluJb SINE Alu 1 303 -9 7795 186 70 38 chr2 123181517 123182220 -127505634 + L1MDa LINE L1 1337 2016 -4524 369 43 0 0 chr2 123182220 123182267 -127505587 + (CA)n Simple_repeat Simple_repeat 2 48 0 7795 186 70 38 chr2 123182267 123182827 -127505027 + L1MDa LINE L1 2016 2928 -3612 2262 95 0 0 chr2 123182827 123183122 -127504732 + AluSc SINE Alu 1 295 -14 7795 186 70 38 chr2 123183122 123183169 -127504685 + L1MDa LINE L1 2928 2972 -3568 1668 192 0 7 chr2 123183169 123183476 -127504378 + AluJo SINE Alu 1 305 -7 1661 178 0 13 chr2 123183476 123183807 -127504047 + AluJo SINE Alu 1 327 0 984 237 33 8 chr2 123183808 123184053 -127503801 + L1M4 LINE L1 4018 4268 -1878 * 1834 231 119 25 chr2 123184034 123184555 -127503299 + L1MDa LINE L1 2959 3430 -3110 2436 63 0 0 chr2 123184555 123184858 -127502996 + AluY SINE Alu 1 303 -8 1834 231 119 25 chr2 123184858 123184888 -127502966 + L1MDa LINE L1 3430 3456 -3084 2021 117 14 0 chr2 123184888 123185178 -127502676 + AluSx SINE Alu 4 297 -15 1834 231 119 25 chr2 123185178 123185434 -127502420 + L1MDa LINE L1 3456 3843 -2697 791 128 0 8 chr2 123185442 123185559 -127502295 + AluJo SINE Alu 87 202 -110 364 282 51 51 chr2 123185580 123185796 -127502058 + L1MDa LINE L1 3829 4044 -2496 1719 161 3 14 chr2 123185859 123186151 -127501703 - AluJb SINE Alu -23 289 1 236 140 0 40 chr2 123186152 123186202 -127501652 - MER34 LTR ERV1 -48 494 447 692 191 61 0 chr2 123186350 123186481 -127501373 + FLAM_C SINE Alu 3 141 -2 2153 83 21 0 chr2 123186649 123186938 -127500916 - AluSg SINE Alu -15 295 1 211 250 59 0 chr2 123187011 123187079 -127500775 + MIR SINE MIR 178 249 -13 254 280 80 57 chr2 123188392 123188567 -127499287 + L2 LINE L2 2729 2907 -407 335 244 176 8 chr2 123188705 123188824 -127499030 + L2 LINE L2 3134 3272 0 2193 90 3 13 chr2 123188828 123189140 -127498714 + AluSx SINE Alu 1 309 -3 181 253 116 63 chr2 123189250 123189345 -127498509 - MIR SINE MIR -111 151 52 311 89 22 0 chr2 123189772 123189817 -127498037 - MER75 DNA T2_type 0 504 459 2131 95 0 29 chr2 123189855 123190170 -127497684 - AluSq SINE Alu -7 306 1 271 191 0 44 chr2 123190220 123190288 -127497566 + MER4-int LTR ERV1 1112 1176 -5422 302 207 270 0 chr2 123191124 123191235 -127496619 + L1ME4a LINE L1 5978 6118 -3 488 180 33 80 chr2 123191456 123191531 -127496323 - MER104 DNA Tc2 -1745 153 87 2054 119 3 0 chr2 123191531 123191826 -127496028 + AluSx SINE Alu 1 296 -16 488 180 33 80 chr2 123191826 123191900 -127495954 - MER104 DNA Tc2 -1811 87 11 633 214 62 0 chr2 123192060 123192205 -127495649 + MER58C DNA MER1_type 62 215 0 2174 115 13 107 chr2 123192213 123192587 -127495267 + MER1B DNA MER1_type 1 339 0 275 242 30 106 chr2 123192658 123192790 -127495064 + Charlie8 DNA MER1_type 3 124 -2293 2077 113 3 3 chr2 123193065 123193374 -127494480 - AluSx SINE Alu -2 310 2 982 189 22 0 chr2 123193846 123194031 -127493823 + MER2 DNA MER2_type 2 190 -155 2172 75 14 20 chr2 123194031 123194189 -127493665 - AluSg SINE Alu -17 293 136 2182 117 3 0 chr2 123194189 123194496 -127493358 - AluSp SINE Alu -5 308 1 2172 75 14 20 chr2 123194496 123194632 -127493222 - AluSg SINE Alu -174 136 1 675 256 75 4 chr2 123194753 123194980 -127492874 - L1MC4 LINE L1 -5 8037 7795 2500 49 0 10 chr2 123195342 123195649 -127492205 - AluY SINE Alu -7 304 1 456 191 40 135 chr2 123195978 123196104 -127491750 + MER58B DNA MER1_type 102 341 0 523 234 92 14 chr2 123196175 123196316 -127491538 - MLT1J LTR MaLR -195 316 165 695 185 0 15 chr2 123196527 123196662 -127491192 + FLAM_C SINE Alu 1 133 0 29 0 0 0 chr2 123196743 123196772 -127491082 + AT_rich Low_complexity Low_complexity 1 29 0 893 114 8 0 chr2 123198526 123198658 -127489196 + FLAM_C SINE Alu 1 133 -10 23 0 0 0 chr2 123200130 123200153 -127487701 + AT_rich Low_complexity Low_complexity 1 23 0 182 297 112 70 chr2 123200300 123200559 -127487295 - L2 LINE L2 -824 2490 2221 633 270 111 0 chr2 123200728 123200917 -127486937 - MLT1I LTR MaLR -3 406 197 1751 150 6 22 chr2 123200965 123201279 -127486575 - AluJb SINE Alu -3 309 1 509 289 71 24 chr2 123201559 123201770 -127486084 - MIR SINE MIR -6 256 36 2268 173 118 44 chr2 123202051 123202399 -127485455 - L1MB8 LINE L1 -1 6177 5856 1953 85 0 75 chr2 123202399 123202705 -127485149 - AluSx SINE Alu -16 296 14 2268 173 118 44 chr2 123202705 123202968 -127484886 - L1MB8 LINE L1 -322 5856 5521 1344 7 0 0 chr2 123203129 123203277 -127484577 - L1PA5 LINE L1 -8 6146 5999 2114 101 7 0 chr2 123203280 123203567 -127484287 - AluSx SINE Alu -15 297 9 2338 74 0 0 chr2 123205027 123205324 -127482530 - AluSx SINE Alu -15 297 1 1647 134 95 32 chr2 123206002 123206286 -127481568 + AluJb SINE Alu 1 302 0 1996 175 24 16 chr2 123206596 123206749 -127481105 - MER57A LTR ERV1 0 403 253 1401 94 169 15 chr2 123206749 123206886 -127480968 + AluSg1 SINE Alu 1 116 -193 2085 111 30 0 chr2 123206886 123207184 -127480670 + AluSg SINE Alu 1 307 -3 2258 104 0 0 chr2 123207191 123207499 -127480355 + AluSx SINE Alu 1 308 -4 1401 94 169 15 chr2 123207499 123207619 -127480235 + AluSg1 SINE Alu 121 307 -2 1996 175 24 16 chr2 123207619 123207848 -127480006 - MER57A LTR ERV1 -150 253 18 246 200 0 0 chr2 123208132 123208172 -127479682 + Alu SINE Alu 199 238 -61 258 159 0 19 chr2 123208550 123208602 -127479252 + AluSg SINE Alu 1 35 -267 330 269 31 88 chr2 123209071 123209264 -127478590 + L2 LINE L2 2935 3116 -156 198 344 86 33 chr2 123209906 123210057 -127477797 + MIR3 SINE MIR 34 192 -16 938 93 23 0 chr2 123210071 123210200 -127477654 + AluSq/x SINE Alu 1 132 -181 1847 116 0 4 chr2 123210204 123210463 -127477391 + AluSg SINE Alu 35 292 -18 1877 112 0 21 chr2 123210466 123210602 -127477252 + AluSx SINE Alu 1 138 -174 2085 131 0 0 chr2 123210602 123210899 -127476955 + AluSx SINE Alu 1 297 -15 1877 112 0 21 chr2 123210899 123211048 -127476806 + AluSx SINE Alu 138 280 -32 224 29 0 29 chr2 123211050 123211084 -127476770 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 362 244 34 50 chr2 123211087 123211206 -127476648 - MER112 DNA MER1_type -96 164 48 1515 130 0 47 chr2 123211371 123211625 -127476229 + AluSq SINE Alu 1 242 -71 21 0 0 0 chr2 123211769 123211790 -127476064 + AT_rich Low_complexity Low_complexity 1 21 0 236 191 15 29 chr2 123211792 123211860 -127475994 + (TA)n Simple_repeat Simple_repeat 2 68 0 2041 95 0 10 chr2 123211880 123212176 -127475678 + AluSg SINE Alu 1 293 -17 445 308 156 5 chr2 123212447 123212671 -127475183 - MIR SINE MIR 0 262 5 188 75 0 75 chr2 123214306 123214346 -127473508 + (CGAGG)n Simple_repeat Simple_repeat 4 40 0 200 254 0 14 chr2 123214562 123214633 -127473221 + G-rich Low_complexity Low_complexity 3 72 0 2075 50 6 99 chr2 123214801 123215123 -127472731 - AluSq SINE Alu -21 292 1 2196 91 0 16 chr2 123215557 123215866 -127471988 - AluSx SINE Alu -8 304 1 312 27 0 0 chr2 123216997 123217034 -127470820 + (TG)n Simple_repeat Simple_repeat 1 37 0 384 206 93 21 chr2 123217260 123217357 -127470497 - MER5A DNA MER1_type -76 113 10 379 178 51 76 chr2 123217411 123217529 -127470325 + MLT1B LTR MaLR 11 125 -265 2370 91 0 0 chr2 123217529 123217836 -127470018 + AluSx SINE Alu 1 307 -5 204 325 175 0 chr2 123217837 123217917 -127469937 - L2 LINE L2 -621 2693 2600 5304 70 11 31 chr2 123218163 123218330 -127469524 - LTR8 LTR ERV1 0 691 522 2516 41 0 0 chr2 123218330 123218625 -127469229 - AluY SINE Alu -15 296 2 5304 70 11 31 chr2 123218625 123219162 -127468692 - LTR8 LTR ERV1 -169 522 1 2044 86 0 38 chr2 123219402 123219730 -127468124 - AluSg SINE Alu 0 317 1 221 290 86 21 chr2 123221192 123221285 -127466569 + L2 LINE L2 2349 2447 -867 2596 129 2 17 chr2 123221339 123221365 -127466489 - L1MB3 LINE L1 -10 6173 6148 1612 153 0 62 chr2 123221365 123221576 -127466278 - AluJb SINE Alu -23 289 67 180 0 0 0 chr2 123221576 123221596 -127466258 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2021 114 0 0 chr2 123221596 123221877 -127465977 - AluSx SINE Alu -29 283 3 1612 153 0 62 chr2 123221877 123221972 -127465882 - AluJb SINE Alu -243 69 1 2596 129 2 17 chr2 123221972 123222365 -127465489 - L1MB3 LINE L1 -35 6148 5760 2252 88 3 0 chr2 123222373 123222668 -127465186 - AluSx SINE Alu -16 296 1 2001 86 8 0 chr2 123222679 123222947 -127464907 - AluSp SINE Alu -18 295 26 188 297 207 9 chr2 123223724 123223835 -127464019 + MIR SINE MIR 99 231 -31 263 167 133 0 chr2 123224441 123224501 -127463353 - L2 LINE L2 -6 3307 3240 2083 108 0 0 chr2 123224649 123224928 -127462926 - AluSg SINE Alu -31 279 1 346 277 58 22 chr2 123225005 123225142 -127462712 - HAL1 LINE L1 -2362 145 4 394 271 69 12 chr2 123225202 123225377 -127462477 - L1ME4a LINE L1 -5 6702 5935 499 130 209 61 chr2 123226117 123226232 -127461622 - FLAM_C SINE Alu 0 133 2 398 297 92 0 chr2 123226232 123226417 -127461437 + L1ME LINE L1 5566 5767 -354 1925 99 0 72 chr2 123226555 123226892 -127460962 + AluSx SINE Alu 1 315 0 2062 72 38 21 chr2 123226947 123227238 -127460616 + AluSx SINE Alu 1 296 -16 1169 121 0 0 chr2 123227238 123227404 -127460450 + AluSg/x SINE Alu 134 299 -13 522 232 0 0 chr2 123227816 123227915 -127459939 + FLAM_A SINE Alu 18 116 -26 2510 103 15 122 chr2 123228739 123228793 -127459061 + MSTB LTR MaLR 1 59 -367 4258 67 15 7 chr2 123228793 123228847 -127459007 + L1PA8 LINE L1 5630 5682 -490 2209 112 0 3 chr2 123228847 123229143 -127458711 + AluSg SINE Alu 1 295 -15 4258 67 15 7 chr2 123229143 123229625 -127458229 + L1PA8 LINE L1 5682 6170 -2 2510 103 15 122 chr2 123229625 123230047 -127457807 + MSTB LTR MaLR 59 426 0 312 338 77 77 chr2 123230203 123230526 -127457328 + L2 LINE L2 2950 3272 0 448 265 169 66 chr2 123230653 123230749 -127457105 - L2 LINE L2 -1 3312 3227 2016 140 0 7 chr2 123230749 123231042 -127456812 - AluSx SINE Alu -18 294 4 448 265 169 66 chr2 123231042 123231217 -127456637 - L2 LINE L2 -86 3227 3013 2181 113 0 22 chr2 123231292 123231610 -127456244 - AluSx SINE Alu -1 311 1 2184 107 17 0 chr2 123231708 123232007 -127455847 - AluSx SINE Alu -8 304 1 1631 210 40 58 chr2 123232025 123232425 -127455429 + HERV3 LTR ERV1 2081 2473 -3858 1147 161 185 50 chr2 123232456 123232536 -127455318 - MER61D LTR ERV1 0 501 433 1997 141 3 7 chr2 123232536 123232835 -127455019 + AluSx SINE Alu 2 299 -13 1147 161 185 50 chr2 123232835 123233014 -127454840 - MER61D LTR ERV1 -68 433 207 1713 218 39 51 chr2 123233088 123233501 -127454353 + LTR2 LTR ERV1 42 449 0 3779 161 38 56 chr2 123233501 123234931 -127452923 + Harlequin LTR ERV1 1 1481 -6945 1929 127 108 91 chr2 123234902 123235320 -127452534 + HERV3 LTR ERV1 3930 4354 -3459 * 1701 238 65 6 chr2 123235302 123235642 -127452212 + HERV3 LTR ERV1 1721 2080 -6346 * 874 303 18 9 chr2 123235806 123236034 -127451820 + HERV3 LTR ERV1 2077 2306 -6120 717 99 0 0 chr2 123236034 123236125 -127451729 - MER61D LTR ERV1 -297 204 114 1713 149 46 4 chr2 123236240 123236521 -127451333 + AluJb SINE Alu 1 293 -19 575 113 0 52 chr2 123236521 123236607 -127451247 - FLAM SINE Alu -188 124 42 2830 156 62 19 chr2 123236607 123237139 -127450715 + LTR10A LTR ERV1 1 555 -54 1494 251 75 81 chr2 123237149 123237986 -127449868 + LTR10A-int LTR ERV1 1 832 -5817 1072 117 160 8 chr2 123237956 123238243 -127449611 + LTR10A-int LTR ERV1 751 2694 -3955 * 812 260 0 6 chr2 123238234 123238415 -127449439 + LTR10A-int LTR ERV1 3138 3317 -4468 * 4338 146 26 32 chr2 123238395 123239458 -127448396 + LTR10A-int LTR ERV1 953 4405 -3380 421 255 11 0 chr2 123239458 123239552 -127448302 + AluSp/q SINE Alu 208 302 -11 444 316 60 18 chr2 123239558 123239726 -127448128 + MER34C LTR ERV1 256 430 -155 1545 206 46 87 chr2 123239726 123239847 -127448007 + LTR23-int LTR ERV1 1225 1349 -3774 2353 105 0 0 chr2 123239847 123240151 -127447703 + AluSg SINE Alu 3 306 -4 1545 206 46 87 chr2 123240151 123240568 -127447286 + LTR23-int LTR ERV1 1349 1741 -3382 3746 95 10 10 chr2 123240571 123241167 -127446687 - LTR8 LTR ERV1 0 691 2 2286 111 0 13 chr2 123241171 123241487 -127446367 - AluSq SINE Alu 0 313 2 23 68 0 0 chr2 123241544 123241588 -127446266 + AT_rich Low_complexity Low_complexity 1 44 0 16258 168 27 20 chr2 123241954 123242504 -127445350 - L1P5 LINE L1 -407 6460 5915 2431 90 0 3 chr2 123242504 123242816 -127445038 - AluY SINE Alu 0 311 1 243 0 0 0 chr2 123242816 123242843 -127445011 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 2225 109 0 0 chr2 123242843 123243126 -127444728 - AluSx SINE Alu -29 283 1 16258 168 27 20 chr2 123243126 123244715 -127443139 - L1P5 LINE L1 -952 5915 4339 2285 113 7 0 chr2 123244715 123245016 -127442838 - AluSq SINE Alu -10 303 1 16258 168 27 20 chr2 123245016 123246043 -127441811 - L1P5 LINE L1 -2528 4339 3321 429 20 0 0 chr2 123246043 123246093 -127441761 + (TTCC)n Simple_repeat Simple_repeat 3 52 0 2118 127 0 0 chr2 123246096 123246379 -127441475 - AluSx SINE Alu -29 283 1 16258 168 27 20 chr2 123246379 123246457 -127441397 - L1P5 LINE L1 -3547 3320 3244 2196 125 0 0 chr2 123246457 123246754 -127441100 - AluSx SINE Alu -15 297 1 16258 168 27 20 chr2 123246754 123247116 -127440738 - L1P5 LINE L1 -3623 3244 2886 2421 82 0 3 chr2 123247116 123247422 -127440432 - AluY SINE Alu -6 305 1 16258 168 27 20 chr2 123247422 123248313 -127439541 - L1P5 LINE L1 -3981 2886 2003 2385 89 3 3 chr2 123248313 123248616 -127439238 - AluSp SINE Alu -10 303 1 16258 168 27 20 chr2 123248616 123248675 -127439179 - L1P5 LINE L1 -4864 2003 1946 1707 166 16 19 chr2 123248675 123248982 -127438872 - AluSx SINE Alu -6 306 1 16258 168 27 20 chr2 123248982 123250628 -127437226 - L1P5 LINE L1 -4921 1946 162 1530 153 8 24 chr2 123250633 123250888 -127436966 + AluJo SINE Alu 40 290 -22 1626 185 39 73 chr2 123250924 123251437 -127436417 - L1M4 LINE L1 -1161 4985 4392 1876 174 7 0 chr2 123251437 123251747 -127436107 - AluSx SINE Alu 0 312 1 1626 185 39 73 chr2 123251747 123251785 -127436069 - L1M4 LINE L1 -1754 4392 4354 1533 189 54 13 chr2 123252054 123252367 -127435487 + MSTB1 LTR MaLR 4 329 -103 1388 113 69 0 chr2 123252367 123252570 -127435284 - AluSg/x SINE Alu -11 301 85 797 84 9 0 chr2 123252572 123252679 -127435175 + MSTB1 LTR MaLR 325 432 0 421 274 144 31 chr2 123252789 123253179 -127434675 + L1MC4a LINE L1 4723 5156 -990 276 333 44 0 chr2 123253327 123253462 -127434392 + L1MC4a LINE L1 5351 5491 -2317 468 241 28 79 chr2 123253643 123253746 -127434108 + L1MC4a LINE L1 5721 5809 -1999 979 196 6 6 chr2 123253746 123253919 -127433935 + FAM SINE Alu 1 173 -2 468 241 28 79 chr2 123253919 123254031 -127433823 + L1MC4a LINE L1 5809 5925 -1883 1946 81 4 0 chr2 123254510 123254806 -127433048 + L1PA8 LINE L1 5892 6188 0 666 233 31 18 chr2 123254908 123255071 -127432783 + MIR3 SINE MIR 38 202 -6 695 216 0 0 chr2 123256160 123256276 -127431578 - FLAM_A SINE Alu -17 125 10 2091 98 14 0 chr2 123256593 123256878 -127430976 - AluSx SINE Alu -23 289 1 22 0 0 0 chr2 123258595 123258617 -127429237 + AT_rich Low_complexity Low_complexity 1 22 0 1042 135 43 12 chr2 123258620 123258783 -127429071 + AluSp SINE Alu 134 301 -12 920 115 0 0 chr2 123258794 123258916 -127428938 + FLAM_C SINE Alu 12 133 -10 210 191 0 0 chr2 123258928 123258970 -127428884 + (TA)n Simple_repeat Simple_repeat 2 43 0 198 0 0 0 chr2 123258970 123258992 -127428862 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 297 0 0 0 chr2 123258991 123259024 -127428830 + (TG)n Simple_repeat Simple_repeat 1 33 0 1050 120 0 0 chr2 123259031 123259173 -127428681 - AluSg/x SINE Alu -38 272 131 472 86 0 0 chr2 123259173 123259231 -127428623 - Alu SINE Alu -259 59 2 317 179 145 26 chr2 123259232 123259349 -127428505 - L1ME4a LINE L1 -17 6104 5974 1321 25 32 6 chr2 123259481 123259638 -127428216 + L1PA4 LINE L1 5992 6152 -3 1904 162 0 3 chr2 123259850 123260153 -127427701 - AluJo SINE Alu -10 302 1 464 234 166 14 chr2 123260326 123260471 -127427383 - MIR3 SINE MIR -9 199 33 2004 116 49 0 chr2 123260475 123260760 -127427094 - AluSx SINE Alu -13 299 1 293 170 0 0 chr2 123260892 123260939 -127426915 + L1MC5 LINE L1 7193 7239 -722 633 211 115 19 chr2 123261642 123261903 -127425951 + L1MC5 LINE L1 7289 7574 -387 930 229 14 46 chr2 123261934 123262214 -127425640 + L1M4 LINE L1 3305 3575 -2571 2021 106 0 34 chr2 123262217 123262534 -127425320 + AluSg SINE Alu 1 307 0 1946 115 13 49 chr2 123262543 123262680 -127425174 + AluSx SINE Alu 1 141 -171 2072 111 0 31 chr2 123262680 123262995 -127424859 + AluSg SINE Alu 1 306 0 1946 115 13 49 chr2 123262995 123263160 -127424694 + AluSx SINE Alu 141 293 -19 501 242 175 21 chr2 123263745 123263939 -127423915 - MIR SINE MIR -2 260 37 1513 88 56 5 chr2 123264208 123264424 -127423430 - MER30 DNA MER1_type 0 230 4 283 324 77 37 chr2 123264834 123265133 -127422721 - L1ME LINE L1 -459 5662 5352 710 183 93 113 chr2 123265634 123265935 -127421919 - MER39 LTR ERV1 0 707 413 398 275 54 13 chr2 123266232 123266381 -127421473 + MIR SINE MIR 65 219 -43 259 65 43 0 chr2 123267539 123267585 -127420269 + GA-rich Low_complexity Low_complexity 1 48 0 1312 129 38 19 chr2 123268768 123269031 -127418823 - AluSg SINE Alu -12 298 31 2285 90 0 7 chr2 123269492 123269791 -127418063 - AluY SINE Alu -14 297 1 1602 199 15 32 chr2 123269795 123270137 -127417717 - L1MB3 LINE L1 -144 6039 5704 363 211 0 0 chr2 123270390 123270551 -127417303 + (TG)n Simple_repeat Simple_repeat 1 161 0 201 74 0 0 chr2 123270550 123270577 -127417277 + (GGGAGA)n Simple_repeat Simple_repeat 3 29 0 * 204 135 0 0 chr2 123270576 123270613 -127417241 + (TG)n Simple_repeat Simple_repeat 1 37 0 768 143 0 8 chr2 123271207 123271326 -127416528 - Tigger1 DNA MER2_type -1 2417 2300 1735 177 3 23 chr2 123271327 123271497 -127416357 + AluJo SINE Alu 1 164 -148 3378 109 25 0 chr2 123271497 123271946 -127415908 + LTR46 LTR ERV1 1 460 0 1735 177 3 23 chr2 123271946 123272085 -127415769 + AluJo SINE Alu 164 304 -8 300 312 119 0 chr2 123272223 123272332 -127415522 + LTR33 LTR ERVL 25 146 -375 552 325 71 12 chr2 123272367 123272622 -127415232 + LTR33 LTR ERVL 250 519 -2 266 250 86 21 chr2 123272903 123273043 -127414811 - L1ME4a LINE L1 -11 6110 5962 655 246 17 79 chr2 123273080 123273189 -127414665 - L1MB3 LINE L1 -385 5736 5622 2254 130 0 0 chr2 123273189 123273496 -127414358 - AluSx SINE Alu -5 307 1 655 246 17 79 chr2 123273496 123273520 -127414334 - L1MB3 LINE L1 -499 5622 5598 1910 177 38 35 chr2 123273520 123273893 -127413961 - MLT1A2 LTR MaLR 0 374 1 655 246 17 79 chr2 123273893 123273998 -127413856 - L1MB3 LINE L1 -523 5598 5512 2105 65 4 8 chr2 123273999 123274259 -127413595 + L1PA5 LINE L1 5896 6154 0 1450 189 24 21 chr2 123274399 123274690 -127413164 + AluJo SINE Alu 3 294 -18 335 70 0 0 chr2 123275161 123275204 -127412650 - L1PB1 LINE L1 -171 5980 5938 654 197 16 0 chr2 123275355 123275477 -127412377 - L1MC5 LINE L1 -875 7086 6963 25 0 0 0 chr2 123275536 123275561 -127412293 + AT_rich Low_complexity Low_complexity 1 25 0 4407 72 7 12 chr2 123275567 123276136 -127411718 - L1PB1 LINE L1 -1 6150 5585 2451 165 68 96 chr2 123276137 123276418 -127411436 - L1ME1 LINE L1 -6 6160 5873 886 148 0 15 chr2 123276418 123276553 -127411301 - FLAM_C SINE Alu 0 133 1 2451 165 68 96 chr2 123276553 123276888 -127410966 - L1ME1 LINE L1 -293 5873 5561 3346 132 34 6 chr2 123276977 123277509 -127410345 + L1MB2 LINE L1 5590 6136 -35 209 150 17 50 chr2 123277511 123277571 -127410283 + A-rich Low_complexity Low_complexity 5 62 0 467 232 110 26 chr2 123277571 123277726 -127410128 - L1ME3 LINE L1 -75 6087 5920 737 241 51 28 chr2 123277746 123277974 -127409880 - L1MC5 LINE L1 -986 6822 6601 1591 184 36 14 chr2 123277974 123278276 -127409578 - AluJo SINE Alu 0 308 1 2380 102 0 3 chr2 123278282 123278596 -127409258 - AluSq SINE Alu 0 313 1 737 241 51 28 chr2 123278596 123278694 -127409160 - L1MC5 LINE L1 -1211 6597 6516 846 179 0 0 chr2 123278838 123278978 -127408876 + FLAM_C SINE Alu 1 140 -3 255 339 0 0 chr2 123279298 123279360 -127408494 + MER119 DNA MER1_type 2 63 -520 987 95 0 0 chr2 123280154 123280280 -127407574 + FLAM_C SINE Alu 1 126 -7 194 0 39 0 chr2 123280283 123280309 -127407545 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 300 297 74 40 chr2 123280427 123280558 -127407296 - L1MC4 LINE L1 -1 8041 7903 1889 154 0 0 chr2 123280558 123280851 -127407003 - AluSx SINE Alu -18 294 2 300 297 74 40 chr2 123280851 123280867 -127406987 - L1MC4 LINE L1 -139 7903 7889 234 273 0 0 chr2 123280939 123280994 -127406860 + (CATA)n Simple_repeat Simple_repeat 2 56 0 1342 197 52 0 chr2 123280994 123281243 -127406611 - MER82 DNA MER2_type 0 653 392 2061 107 3 17 chr2 123281261 123281424 -127406430 - AluSq SINE Alu -17 296 137 2116 114 0 7 chr2 123281424 123281732 -127406122 - AluSp SINE Alu -7 306 1 2061 107 3 17 chr2 123281732 123281868 -127405986 - AluSq SINE Alu -176 137 1 895 171 0 40 chr2 123281873 123282049 -127405805 - AluJo SINE Alu -21 291 123 2185 165 5 18 chr2 123282050 123282445 -127405409 - MER82 DNA MER2_type -263 390 1 262 295 116 17 chr2 123282475 123282648 -127405206 + L1ME LINE L1 5519 5708 -413 291 103 0 51 chr2 123283238 123283316 -127404538 + (TCCCC)n Simple_repeat Simple_repeat 4 77 0 350 67 0 0 chr2 123283701 123283746 -127404108 - MER82 DNA MER2_type -345 308 264 777 232 6 33 chr2 123284156 123284337 -127403517 - MER45A DNA AcHobo -2 176 1 292 119 34 0 chr2 123284577 123284636 -127403218 + CT-rich Low_complexity Low_complexity 1 61 0 315 269 39 0 chr2 123284637 123284715 -127403139 + MIR3 SINE MIR 107 187 -21 1730 171 0 29 chr2 123285735 123286045 -127401809 + AluJo SINE Alu 1 301 -11 1894 124 7 3 chr2 123286306 123286612 -127401242 - AluSx SINE Alu 0 307 1 798 133 7 22 chr2 123286634 123286769 -127401085 - AluJo SINE Alu -169 133 1 327 250 59 52 chr2 123287270 123287406 -127400448 + MLT1H LTR MaLR 90 226 -323 1576 182 30 3 chr2 123287425 123287722 -127400132 - AluJo SINE Alu -7 305 1 433 206 128 0 chr2 123287756 123287858 -127399996 + MLT1H1 LTR MaLR 439 553 -2 548 251 118 35 chr2 123289125 123289328 -127398526 - L2 LINE L2 0 3313 3094 2189 91 0 26 chr2 123289529 123289837 -127398017 + AluSq SINE Alu 1 300 -13 1820 203 30 0 chr2 123290109 123290473 -127397381 - MLT1B LTR MaLR -12 378 4 1991 108 22 0 chr2 123290989 123291302 -127396552 + AluSg SINE Alu 1 319 0 2036 112 0 10 chr2 123291316 123291611 -127396243 + AluSc SINE Alu 1 292 -17 356 281 111 77 chr2 123291618 123292006 -127395848 + MLT1J LTR MaLR 111 511 0 377 346 124 0 chr2 123292469 123292654 -127395200 - MIR SINE MIR -2 260 53 220 182 18 18 chr2 123292739 123292794 -127395060 + (TA)n Simple_repeat Simple_repeat 1 55 0 1690 124 0 4 chr2 123293153 123293395 -127394459 - AluSx SINE Alu -71 241 1 802 200 36 0 chr2 123293395 123293581 -127394273 + L1MB8 LINE L1 5045 5240 -906 296 163 0 0 chr2 123293581 123293624 -127394230 - 5S rRNA rRNA -78 43 1 1839 175 46 3 chr2 123293624 123293994 -127393860 + L1MB8 LINE L1 5229 5613 -571 1905 172 63 19 chr2 123293998 123294411 -127393443 + L1MB8 LINE L1 5748 6178 0 1038 216 57 90 chr2 123294655 123294718 -127393136 + L1MDa LINE L1 144 208 -6332 2187 40 4 18 chr2 123294718 123294993 -127392861 - L1PA7 LINE L1 -1 6153 5883 1038 216 57 90 chr2 123294993 123295262 -127392592 + L1MDa LINE L1 208 465 -6075 2440 184 118 29 chr2 123295418 123296132 -127391722 + L1MDa LINE L1 998 1774 -4766 412 102 0 0 chr2 123296145 123296204 -127391650 + Alu SINE Alu 2 60 -258 279 177 81 0 chr2 123296205 123296267 -127391587 + L1MDa LINE L1 1789 1855 -4685 1985 113 0 3 chr2 123296320 123296602 -127391252 - AluSq SINE Alu -12 301 21 440 332 76 36 chr2 123296620 123297045 -127390809 - L1 LINE L1 -1638 4508 4067 26 0 0 0 chr2 123297146 123297172 -127390682 + AT_rich Low_complexity Low_complexity 1 26 0 2286 186 39 5 chr2 123297297 123297706 -127390148 + MSTB1 LTR MaLR 10 432 0 276 177 25 13 chr2 123298522 123298601 -127389253 + CT-rich Low_complexity Low_complexity 4 83 0 796 226 127 5 chr2 123298751 123298972 -127388882 - MIR SINE MIR -14 248 1 338 309 117 11 chr2 123299103 123299291 -127388563 - MIR3 SINE MIR 0 208 1 237 295 21 32 chr2 123299819 123299914 -127387940 - MIR SINE MIR -1 261 168 1800 158 158 64 chr2 123299917 123300028 -127387826 + MLT1D LTR MaLR 7 106 -399 856 141 0 8 chr2 123300028 123300156 -127387698 - FLAM_C SINE Alu -5 128 2 1800 158 158 64 chr2 123300156 123300436 -127387418 + MLT1D LTR MaLR 106 448 -57 2780 7 0 0 chr2 123300436 123300744 -127387110 - AluYa5 SINE Alu -3 308 1 1800 158 158 64 chr2 123300744 123300801 -127387053 + MLT1D LTR MaLR 448 498 -7 476 252 122 7 chr2 123300807 123300946 -127386908 - MIR SINE MIR -98 164 10 250 194 14 69 chr2 123300930 123301002 -127386852 + MIR SINE MIR 70 137 -125 * 2061 122 0 0 chr2 123301338 123301633 -127386221 - AluSx SINE Alu -17 295 1 380 262 225 19 chr2 123301968 123302239 -127385615 - L1ME4a LINE L1 -2 6119 5793 2231 79 3 3 chr2 123302672 123302964 -127384890 - AluSq SINE Alu -21 292 1 935 202 195 71 chr2 123303139 123303623 -127384231 + MLT1F LTR MaLR 1 403 -6 611 219 151 79 chr2 123304178 123304456 -127383398 - L1MC4a LINE L1 -1894 5914 5617 465 37 0 0 chr2 123305912 123305966 -127381888 + THE1A LTR MaLR 1 54 -301 263 244 70 0 chr2 123355970 123356056 -127331798 - MIR SINE MIR -72 136 45 2015 135 3 0 chr2 123356518 123356815 -127331039 - AluSx SINE Alu -14 298 1 1664 181 13 84 chr2 123357175 123357568 -127330286 - MLT1A1 LTR MaLR 0 365 1 349 290 129 0 chr2 123358231 123358355 -127329499 - MIR SINE MIR -44 218 79 315 352 106 11 chr2 123358940 123359119 -127328735 - MIR SINE MIR -16 246 51 929 193 16 31 chr2 123359161 123359353 -127328501 + MER5A DNA MER1_type 1 189 0 338 315 54 0 chr2 123359366 123359477 -127328377 + MIR SINE MIR 117 233 -29 524 208 40 8 chr2 123361212 123361337 -127326517 - MER106A DNA MER1_type 0 236 108 229 192 27 0 chr2 123361345 123361374 -127326480 + (TCTA)n Simple_repeat Simple_repeat 4 31 -47 2085 114 0 0 chr2 123361374 123361671 -127326183 - AluSg SINE Alu -13 297 1 229 192 27 0 chr2 123361671 123361714 -127326140 + (TCTA)n Simple_repeat Simple_repeat 31 78 0 411 235 157 20 chr2 123361841 123361994 -127325860 - MIR SINE MIR 0 262 89 1857 228 77 18 chr2 123362950 123363406 -127324448 + MER110 LTR ERV1 9 491 0 419 202 77 0 chr2 123363562 123363666 -127324188 + L2 LINE L2 2958 3069 -244 1333 169 124 0 chr2 123363678 123363945 -127323909 + AluJb SINE Alu 1 300 -12 23 22 0 44 chr2 123364066 123364090 -127323764 + AT_rich Low_complexity Low_complexity 1 25 -18 1543 192 3 7 chr2 123364090 123364398 -127323456 - AluJo SINE Alu -4 308 2 405 58 0 0 chr2 123364398 123364450 -127323404 + (TG)n Simple_repeat Simple_repeat 2 53 0 23 22 0 44 chr2 123364450 123364469 -127323385 + AT_rich Low_complexity Low_complexity 23 43 0 184 300 20 0 chr2 123365351 123365401 -127322453 - L2 LINE L2 -4 3268 3218 296 276 184 6 chr2 123365493 123365656 -127322198 - L2 LINE L2 -1 3271 3080 711 182 77 7 chr2 123365775 123365918 -127321936 - LTR32 LTR ERVL 0 471 319 2008 177 20 12 chr2 123365950 123366295 -127321559 - LTR32 LTR ERVL -110 361 14 1711 161 0 4 chr2 123366480 123366790 -127321064 + AluJo SINE Alu 9 317 0 448 225 98 119 chr2 123367153 123367397 -127320457 - MIR SINE MIR -10 252 14 2240 109 0 0 chr2 123367701 123368003 -127319851 + AluSq SINE Alu 1 302 -11 325 343 61 28 chr2 123368281 123368462 -127319392 - L1ME4a LINE L1 -49 6072 5886 41234 32 23 5 chr2 123368462 123374230 -127313624 - L1PA3 LINE L1 -3 6152 276 979 158 0 19 chr2 123374336 123374468 -127313386 - AluSq SINE Alu -48 265 135 2355 77 0 6 chr2 123374468 123374781 -127313073 - AluY SINE Alu 0 311 1 979 158 0 19 chr2 123374781 123374806 -127313048 - AluSq SINE Alu -178 135 111 278 312 27 2 chr2 123374864 123374978 -127312876 - MER5B DNA MER1_type -1 188 70 351 0 0 0 chr2 123374984 123375023 -127312831 + (TG)n Simple_repeat Simple_repeat 2 40 0 316 261 73 73 chr2 123375119 123375284 -127312570 + L1ME LINE L1 5597 5719 -402 1907 116 60 0 chr2 123375511 123375796 -127312058 - AluSx SINE Alu -10 302 1 919 276 77 33 chr2 123375832 123376447 -127311407 - L2 LINE L2 -8 3305 2673 1228 171 42 35 chr2 123376447 123376730 -127311124 + MER33 DNA MER1_type 1 273 -51 22 0 0 0 chr2 123376742 123376764 -127311090 + AT_rich Low_complexity Low_complexity 1 22 0 336 96 19 0 chr2 123376786 123376838 -127311016 + MER33 DNA MER1_type 268 320 -4 1749 270 122 24 chr2 123376861 123377671 -127310183 - L2 LINE L2 -686 2628 1739 2072 98 0 43 chr2 123377708 123378033 -127309821 + AluSx SINE Alu 1 311 -1 21 71 0 0 chr2 123378066 123378108 -127309746 + AT_rich Low_complexity Low_complexity 1 42 0 514 264 127 20 chr2 123378590 123378787 -127309067 - MIR SINE MIR -5 257 40 326 217 217 0 chr2 123379353 123379473 -127308381 + MIR SINE MIR 111 256 -6 2097 125 0 6 chr2 123379940 123380251 -127307603 - AluSx SINE Alu -3 309 1 264 304 25 13 chr2 123381325 123381397 -127306457 + polypyrimidine Low_complexity Low_complexity 3 78 -4 2161 139 0 0 chr2 123381397 123381706 -127306148 - AluSx SINE Alu -3 309 1 228 111 0 0 chr2 123381715 123381751 -127306103 + (TTC)n Simple_repeat Simple_repeat 2 37 0 227 186 0 0 chr2 123382181 123382224 -127305630 + (CAT)n Simple_repeat Simple_repeat 3 45 0 3688 168 75 68 chr2 123382320 123383176 -127304678 - MER21B LTR ERV1 -1 862 1 319 268 59 33 chr2 123383261 123383414 -127304440 - MIR SINE MIR -9 253 97 2685 208 97 73 chr2 123383504 123384429 -127303425 + Zaphod DNA AcHobo 9 961 -3070 2369 87 7 0 chr2 123384429 123384728 -127303126 - AluSq SINE Alu -12 301 1 2685 208 97 73 chr2 123384728 123384779 -127303075 + Zaphod DNA AcHobo 961 1009 -3022 1437 227 47 8 chr2 123384746 123385129 -127302725 + Zaphod DNA AcHobo 3585 3982 -49 * 299 211 0 84 chr2 123385172 123385243 -127302611 + MER115 DNA AcHobo 629 693 0 3388 140 122 35 chr2 123385264 123385884 -127301970 - L1MA6 LINE L1 -1 6299 5546 2108 113 30 13 chr2 123385884 123386186 -127301668 - AluSq SINE Alu -6 307 1 3388 140 122 35 chr2 123386186 123386334 -127301520 - L1MA6 LINE L1 -754 5546 5412 188 235 165 12 chr2 123386350 123386435 -127301419 - MIR SINE MIR -141 121 24 1113 173 112 80 chr2 123386662 123386717 -127301137 - MER33 DNA MER1_type -2261 324 272 1612 171 4 0 chr2 123386717 123386981 -127300873 + AluJb SINE Alu 1 265 -47 1113 173 112 80 chr2 123386981 123387238 -127300616 - MER33 DNA MER1_type -2313 272 2 287 252 76 105 chr2 123387944 123388182 -127299672 + MIR SINE MIR 8 238 -24 2367 89 7 0 chr2 123388406 123388710 -127299144 - AluSx SINE Alu -6 306 1 1089 186 107 82 chr2 123389652 123389772 -127298082 + MLT1A2 LTR MaLR 1 117 -257 2437 52 42 0 chr2 123389772 123390061 -127297793 - AluYa5 SINE Alu -2 309 9 1089 186 107 82 chr2 123390061 123390305 -127297549 + MLT1A2 LTR MaLR 117 374 0 1027 217 32 29 chr2 123391012 123391293 -127296561 + MER33 DNA MER1_type 43 324 0 185 220 242 11 chr2 123391859 123391950 -127295904 + MIR SINE MIR 32 143 -119 491 277 221 13 chr2 123392119 123392354 -127295500 + MLT1K LTR MaLR 137 420 -168 6129 125 30 19 chr2 123392554 123394190 -127293664 - L1PA13 LINE L1 -236 5927 4274 1262 161 36 0 chr2 123394190 123394413 -127293441 - MLT2C2 LTR ERVL -214 250 20 236 253 66 11 chr2 123394445 123394536 -127293318 + MIR3 SINE MIR 86 181 -27 476 296 132 0 chr2 123395921 123396110 -127291744 - MIR SINE MIR 0 262 49 300 292 118 7 chr2 123396352 123396496 -127291358 + MIR SINE MIR 2 161 -101 265 284 125 34 chr2 123397408 123397584 -127290270 - L2 LINE L2 0 3272 3081 502 254 55 12 chr2 123397809 123397974 -127289880 - MIR SINE MIR -86 176 5 538 242 23 0 chr2 123397994 123398122 -127289732 + Charlie5 DNA MER1_type 1 131 -2481 1196 188 97 42 chr2 123398123 123398484 -127289370 + Charlie5 DNA MER1_type 2236 2616 0 232 98 0 59 chr2 123398588 123398639 -127289215 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 1568 194 16 25 chr2 123398641 123398956 -127288898 - AluJo SINE Alu 0 312 1 248 174 0 0 chr2 123400580 123400626 -127287228 - L2 LINE L2 0 3272 3227 325 220 33 107 chr2 123402716 123402866 -127284988 + LTR67 LTR ERVL 31 169 -388 674 223 40 40 chr2 123403160 123403384 -127284470 + MER69 DNA AcHobo 1476 1699 -827 338 216 11 34 chr2 123403383 123403471 -127284383 + LTR67 LTR ERVL 470 555 -2 * 435 224 75 15 chr2 123403515 123403649 -127284205 + MIR SINE MIR 119 260 -2 5068 85 10 26 chr2 123403671 123403846 -127284008 + L1PA14 LINE L1 5433 5609 -552 2693 55 0 0 chr2 123403846 123404157 -127283697 + AluY SINE Alu 1 311 0 5068 85 10 26 chr2 123404157 123404707 -127283147 + L1PA14 LINE L1 5609 6146 -15 572 228 24 42 chr2 123406140 123406278 -127281576 + MER103 DNA DNA 1 137 -29 2873 117 26 5 chr2 123406278 123406696 -127281158 - MSTA LTR MaLR 0 428 2 572 228 24 42 chr2 123406696 123406724 -127281130 + MER103 DNA DNA 137 164 -2 690 171 55 75 chr2 123406808 123407007 -127280847 + L1MA9 LINE L1 6088 6282 -30 2242 105 10 0 chr2 123407033 123407337 -127280517 - AluSx SINE Alu -5 307 1 241 108 0 12 chr2 123407367 123407526 -127280328 + AluSg SINE Alu 17 268 -34 371 278 123 36 chr2 123408351 123408776 -127279078 - L1ME LINE L1 -377 5785 5296 967 250 175 30 chr2 123409057 123409497 -127278357 + MER101B LTR ERV1 35 538 -32 337 248 39 31 chr2 123409530 123409678 -127278176 - L1 LINE L1 -1138 5008 4860 200 239 90 15 chr2 123409721 123409788 -127278066 - MIR SINE MIR -69 139 68 252 244 22 22 chr2 123409836 123409926 -127277928 + CT-rich Low_complexity Low_complexity 3 92 0 198 0 0 0 chr2 123410779 123410801 -127277053 + (TGGG)n Simple_repeat Simple_repeat 4 25 0 241 247 209 21 chr2 123411174 123411342 -127276512 - MLT1J1 LTR MaLR -284 199 3 208 194 111 0 chr2 123411398 123411470 -127276384 + L2 LINE L2 3014 3093 -179 2138 212 22 38 chr2 123411492 123411996 -127275858 - LTR31 LTR ERV1 -15 604 109 231 0 0 0 chr2 123412021 123412054 -127275800 + L1PA3 LINE L1 6120 6152 -3 389 240 20 0 chr2 123412256 123412356 -127275498 + LTR31 LTR ERV1 331 432 -187 1854 154 0 0 chr2 123413469 123413788 -127274066 + L1P LINE L1 4975 5293 -853 641 284 60 15 chr2 123413788 123413989 -127273865 - MIR SINE MIR -36 226 17 239 282 14 14 chr2 123414006 123414077 -127273777 - MIR SINE MIR -160 102 32 596 144 76 45 chr2 123414428 123414560 -127273294 - MER74A LTR ERVL 0 558 423 579 185 9 0 chr2 123414559 123414667 -127273187 - MER74A LTR ERVL -449 109 1 * 345 167 125 0 chr2 123414994 123415066 -127272788 + MER91B DNA MER1_type 51 131 -59 246 62 0 0 chr2 123416139 123416171 -127271683 + (TG)n Simple_repeat Simple_repeat 1 32 0 180 0 0 0 chr2 123416170 123416190 -127271664 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 230 183 14 84 chr2 123416675 123416746 -127271108 - L2 LINE L2 -2 3311 3246 8651 228 51 38 chr2 123417589 123418488 -127269366 - L1ME1 LINE L1 -178 6248 5362 1767 140 38 98 chr2 123418488 123418887 -127268967 - THE1C LTR MaLR 0 375 1 8651 228 51 38 chr2 123418887 123420605 -127267249 - L1ME1 LINE L1 -1064 5362 3668 2214 121 0 0 chr2 123420605 123420903 -127266951 - AluSx SINE Alu -14 298 1 8651 228 51 38 chr2 123420903 123421465 -127266389 - L1ME1 LINE L1 -2758 3668 3025 2129 107 0 0 chr2 123421465 123421816 -127266038 - AluSc SINE Alu 0 351 1 8651 228 51 38 chr2 123421816 123422027 -127265827 - L1ME1 LINE L1 -3401 3025 2818 2458 243 39 12 chr2 123422055 123422624 -127265230 + MLT1E LTR MaLR 8 591 -2 2821 200 141 72 chr2 123422627 123422830 -127265024 - L1ME1 LINE L1 -3604 2802 2614 198 0 0 0 chr2 123422830 123422852 -127265002 + (TTCC)n Simple_repeat Simple_repeat 3 24 0 2028 124 14 3 chr2 123422852 123423143 -127264711 - AluSx SINE Alu -18 294 1 2821 200 141 72 chr2 123423143 123423743 -127264111 - L1ME1 LINE L1 -3792 2614 2057 2084 108 48 67 chr2 123423743 123424114 -127263740 + THE1B LTR MaLR 1 364 0 2821 200 141 72 chr2 123424114 123424176 -127263678 - L1ME1 LINE L1 -4349 2057 2001 1401 170 74 39 chr2 123424176 123424491 -127263363 - AluJo SINE Alu 0 312 4 2821 200 141 72 chr2 123424491 123424595 -127263259 - L1ME1 LINE L1 -4405 2001 1906 1895 161 2 97 chr2 123424595 123424998 -127262856 - MLT1A1 LTR MaLR 0 365 1 2821 200 141 72 chr2 123424998 123425951 -127261903 - L1ME1 LINE L1 -4500 1906 783 217 244 0 0 chr2 123426386 123426431 -127261423 + A-rich Low_complexity Low_complexity 2 46 0 456 278 8 15 chr2 123427004 123427137 -127260717 - MLT1L LTR MaLR -18 597 466 467 339 77 12 chr2 123427182 123427507 -127260347 - MLT1L LTR MaLR -230 385 40 4878 177 48 4 chr2 123427507 123428310 -127259544 + L1MB1 LINE L1 4478 5244 -924 213 39 0 0 chr2 123428310 123428336 -127259518 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 4878 177 48 4 chr2 123428336 123429172 -127258682 + L1MB1 LINE L1 5244 6168 0 390 275 63 7 chr2 123430145 123430287 -127257567 - MIR3 SINE MIR -10 198 49 383 191 48 0 chr2 123430942 123431026 -127256828 + L1MC5 LINE L1 7246 7333 -628 275 189 57 0 chr2 123431040 123431093 -127256761 - L1MC5 LINE L1 -655 7306 7251 * 584 214 48 35 chr2 123431092 123431237 -127256617 + L1MC5 LINE L1 7761 7907 -54 299 268 140 32 chr2 123431904 123432061 -127255793 - MLT1J LTR MaLR -312 199 26 188 311 81 14 chr2 123433809 123433883 -127253971 - L2 LINE L2 -9 3263 3185 1977 148 45 26 chr2 123434694 123435015 -127252839 - L1MB2 LINE L1 -9 6162 5831 690 222 8 0 chr2 123435015 123435141 -127252713 - FLAM_A SINE Alu -2 131 5 1977 148 45 26 chr2 123435141 123435198 -127252656 - L1MB2 LINE L1 -340 5831 5777 1192 148 88 24 chr2 123435198 123435411 -127252443 - L1MB2 LINE L1 -655 5528 5330 180 0 0 0 chr2 123435411 123435431 -127252423 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1192 148 88 24 chr2 123435431 123435623 -127252231 - L1MB2 LINE L1 -853 5330 5105 812 293 25 11 chr2 123435632 123435900 -127251954 - LTR16C LTR ERVL -34 457 78 2461 145 24 29 chr2 123436014 123436435 -127251419 - MSTB1 LTR MaLR -13 419 1 306 205 60 24 chr2 123436435 123436518 -127251336 + MIR SINE MIR 69 154 -108 2339 88 3 0 chr2 123438161 123438467 -127249387 + AluSp SINE Alu 1 307 -6 358 222 40 56 chr2 123439477 123439603 -127248251 - MLT1K LTR MaLR -18 570 447 210 348 22 0 chr2 123440216 123440308 -127247546 + L2 LINE L2 3178 3271 -1 15945 47 65 5 chr2 123440650 123442679 -127245175 - L1P LINE L1 -3996 2150 1 699 216 90 69 chr2 123443025 123443270 -127244584 + MIR SINE MIR 2 251 -11 456 295 97 19 chr2 123443270 123443477 -127244377 - MIR SINE MIR -4 258 36 198 351 13 0 chr2 123444195 123444272 -127243582 - MIR SINE MIR -71 137 60 901 133 5 109 chr2 123444820 123445030 -127242824 - MER53 DNA DNA -1 188 1 218 272 208 8 chr2 123445091 123445216 -127242638 + L2 LINE L2 3108 3257 -15 403 41 0 0 chr2 123445260 123445309 -127242545 + MADE1 DNA Mariner 1 49 -31 288 188 0 0 chr2 123445525 123445589 -127242265 + (CTAAA)n Simple_repeat Simple_repeat 3 66 0 239 262 0 0 chr2 123446345 123446406 -127241448 - L3 LINE CR1 -294 1283 1223 789 155 16 0 chr2 123446903 123447032 -127240822 + FLAM_C SINE Alu 1 131 -2 250 245 19 0 chr2 123447997 123448050 -127239804 + MER58B DNA MER1_type 1 54 -287 3288 136 32 11 chr2 123448052 123448587 -127239267 - L1PA15 LINE L1 0 6165 5620 2802 136 10 42 chr2 123449112 123449139 -127238715 - MER31A LTR ERV1 0 485 459 2195 104 0 10 chr2 123449139 123449448 -127238406 - AluSx SINE Alu -6 306 1 2802 136 10 42 chr2 123449448 123449807 -127238047 - MER31A LTR ERV1 -26 459 116 2412 62 0 7 chr2 123449807 123450116 -127237738 + AluY SINE Alu 1 307 -4 2802 136 10 42 chr2 123450116 123450229 -127237625 - MER31A LTR ERV1 -369 116 1 421 228 103 41 chr2 123450395 123450458 -127237396 - MIR SINE MIR -9 253 195 2385 177 111 11 chr2 123450458 123450926 -127236928 - MLT2B2 LTR ERVL 0 515 1 421 228 103 41 chr2 123450926 123451007 -127236847 - MIR SINE MIR -67 195 100 1282 128 64 0 chr2 123451079 123451282 -127236572 + MER30 DNA MER1_type 15 230 0 457 287 47 0 chr2 123451310 123451460 -127236394 + MIR SINE MIR 71 227 -35 190 310 86 17 chr2 123451967 123452141 -127235713 - MER5A DNA MER1_type -3 186 1 324 364 113 5 chr2 123454090 123454285 -127233569 + MIR SINE MIR 20 235 -27 851 259 75 26 chr2 123454613 123454926 -127232928 + LTR40a LTR ERVL 135 517 -2 2436 58 0 7 chr2 123455093 123455401 -127232453 + AluY SINE Alu 1 306 -5 189 245 11 53 chr2 123455790 123455884 -127231970 - L2 LINE L2 -281 2991 2902 186 366 65 16 chr2 123456428 123456551 -127231303 + L2 LINE L2 3132 3260 -12 265 372 13 0 chr2 123457595 123457673 -127230181 + L2 LINE L2 3115 3193 -79 1123 239 23 87 chr2 123459623 123459720 -127228134 - MER58B DNA MER1_type -2095 325 223 2237 88 0 0 chr2 123459720 123460015 -127227839 + AluSg SINE Alu 3 297 -13 1123 239 23 87 chr2 123460015 123460028 -127227826 - MER58B DNA MER1_type -2197 223 211 2277 124 0 35 chr2 123460028 123460375 -127227479 + MER1B DNA MER1_type 3 337 0 1123 239 23 87 chr2 123460375 123460610 -127227244 - MER58B DNA MER1_type -2209 211 1 210 233 50 0 chr2 123460618 123460678 -127227176 + MER5A DNA MER1_type 1 63 -126 2111 130 0 0 chr2 123460759 123461066 -127226788 - AluSg SINE Alu -2 308 2 467 354 52 5 chr2 123462673 123462885 -127224969 - MIR SINE MIR -37 225 4 474 325 46 39 chr2 123465085 123465265 -127222589 - L1MC4a LINE L1 -1885 5923 5739 2489 50 3 0 chr2 123465265 123465568 -127222286 + AluY SINE Alu 1 304 -7 474 325 46 39 chr2 123465568 123465670 -127222184 - L1MC4a LINE L1 -2069 5739 5639 2098 98 0 10 chr2 123465883 123466180 -127221674 - AluSq SINE Alu -18 295 2 327 342 13 111 chr2 123466241 123466557 -127221297 - L2 LINE L2 -62 3210 2926 258 358 18 9 chr2 123466619 123466728 -127221126 - L2 LINE L2 -527 2787 2678 356 291 31 22 chr2 123466736 123466936 -127220918 - L1M2 LINE L1 -832 5459 5254 788 341 42 32 chr2 123466961 123467459 -127220395 - L1MC4a LINE L1 -951 5195 4693 2079 168 69 62 chr2 123467723 123468175 -127219679 + LTR42 LTR ERVL 14 468 -27 503 282 94 20 chr2 123468406 123468608 -127219246 + MIR SINE MIR 20 236 -26 1864 142 16 26 chr2 123468685 123468994 -127218860 - AluSx SINE Alu -6 306 1 244 250 0 0 chr2 123469518 123469574 -127218280 + A-rich Low_complexity Low_complexity 1 56 0 2379 65 0 7 chr2 123470602 123470908 -127216946 + AluY SINE Alu 1 304 -7 1084 264 60 19 chr2 123470918 123471334 -127216520 - LTR16A LTR ERVL 0 450 18 439 281 112 50 chr2 123471453 123472068 -127215786 - L2 LINE L2 -2 3311 2437 27342 26 1 1 chr2 123473154 123477164 -127210690 - L1PA2 LINE L1 0 6155 2146 7552 41 0 0 chr2 123477516 123478574 -127209280 - L1PA5 LINE L1 0 6154 5098 10035 47 7 1 chr2 123478574 123479810 -127208044 + L1PA5 LINE L1 3828 5071 -1075 603 290 122 40 chr2 123480942 123481294 -127206560 + MLT1J LTR MaLR 19 399 -112 1323 195 145 108 chr2 123481361 123481843 -127206011 + MLT1E3 LTR MaLR 117 616 -8 2297 212 52 5 chr2 123482218 123482657 -127205197 + MER66B LTR ERV1 27 486 0 282 116 0 0 chr2 123483464 123483507 -127204347 + (TTC)n Simple_repeat Simple_repeat 3 45 0 1965 113 11 0 chr2 123483507 123483772 -127204082 - AluSp SINE Alu -45 268 1 225 261 9 99 chr2 123484660 123484771 -127203083 - MER102b DNA MER1_type -8 333 233 287 229 14 0 chr2 123484934 123485004 -127202850 + L2 LINE L2 3192 3262 -10 2298 74 3 26 chr2 123485063 123485373 -127202481 - AluY SINE Alu -8 303 1 2367 96 3 0 chr2 123485395 123485696 -127202158 + AluSp SINE Alu 1 302 -11 22309 44 47 10 chr2 123486051 123488872 -127198982 - L1P LINE L1 -3219 2927 1 570 305 67 62 chr2 123488873 123489291 -127198563 - L1ME4a LINE L1 -229 5892 5469 3562 52 4 20 chr2 123489291 123489750 -127198104 - L1PA8 LINE L1 0 6172 5721 570 305 67 62 chr2 123489750 123489925 -127197929 - L1ME4a LINE L1 -652 5469 5296 335 264 27 9 chr2 123490785 123490895 -127196959 + CT-rich Low_complexity Low_complexity 3 114 0 621 283 170 18 chr2 123490901 123491524 -127196330 + L2 LINE L2 2140 2857 -457 353 225 12 0 chr2 123492503 123492578 -127195276 + LTR37B LTR ERV1 1 76 -392 1104 206 62 16 chr2 123492578 123492823 -127195031 + Charlie1a DNA MER1_type 1 260 -2501 209 56 0 28 chr2 123492823 123492859 -127194995 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1104 206 62 16 chr2 123492859 123492870 -127194984 + Charlie1a DNA MER1_type 260 269 -1186 * 3492 175 24 35 chr2 123492868 123493622 -127194232 + Charlie1a DNA MER1_type 710 1455 0 776 226 70 77 chr2 123493622 123494025 -127193829 + LTR37B LTR ERV1 69 468 0 240 325 98 5 chr2 123494076 123494279 -127193575 + MIR SINE MIR 2 223 -39 1853 156 12 105 chr2 123494310 123494739 -127193115 - MLT1B LTR MaLR -1 389 1 1645 71 38 0 chr2 123495516 123495727 -127192127 - MER30 DNA MER1_type -7 223 5 392 238 38 0 chr2 123495727 123495832 -127192022 - MIR SINE MIR -69 193 85 379 71 0 18 chr2 123495836 123495892 -127191962 - MLT2A2 LTR ERVL 0 453 399 338 192 8 24 chr2 123495892 123496017 -127191837 + (TA)n Simple_repeat Simple_repeat 2 124 0 289 232 40 0 chr2 123496039 123496138 -127191716 + L1MC4 LINE L1 6614 6716 -1326 228 122 0 0 chr2 123496143 123496184 -127191670 + (TA)n Simple_repeat Simple_repeat 2 42 0 216 179 0 45 chr2 123496289 123496356 -127191498 + (TA)n Simple_repeat Simple_repeat 2 65 0 360 213 0 43 chr2 123496356 123496450 -127191404 + L1MC4 LINE L1 6614 6703 -1339 2925 90 20 8 chr2 123496450 123496849 -127191005 - MLT2A1 LTR ERVL -40 404 1 340 284 85 23 chr2 123498215 123498391 -127189463 + LTR16C LTR ERVL 305 491 0 334 208 104 28 chr2 123498412 123498518 -127189336 + MIR3 SINE MIR 90 203 -5 243 310 190 9 chr2 123499148 123499264 -127188590 - MIR SINE MIR -12 250 114 306 87 0 0 chr2 123499607 123499653 -127188201 + (CA)n Simple_repeat Simple_repeat 2 47 0 231 36 0 0 chr2 123499656 123499684 -127188170 + (GA)n Simple_repeat Simple_repeat 1 28 0 225 294 157 7 chr2 123499855 123500008 -127187846 + MIR3 SINE MIR 30 205 -3 1131 102 0 0 chr2 123500156 123500303 -127187551 - AluSg SINE Alu -163 147 1 252 246 0 0 chr2 123500774 123500831 -127187023 + MIR SINE MIR 76 132 -130 226 161 16 48 chr2 123501018 123501080 -127186774 + T-rich Low_complexity Low_complexity 6 65 0 309 324 195 0 chr2 123501477 123501662 -127186192 - MIR SINE MIR -3 259 39 264 316 92 23 chr2 123502143 123502361 -127185493 + MIR SINE MIR 29 261 -1 465 243 158 0 chr2 123503032 123503184 -127184670 + MIR SINE MIR 20 195 -67 1663 182 0 20 chr2 123503241 123503538 -127184316 - AluJo SINE Alu -21 291 1 719 308 14 0 chr2 123503704 123503925 -127183929 + MIR SINE MIR 11 234 -28 212 233 150 0 chr2 123503917 123503977 -127183877 + L2 LINE L2 2617 2685 -629 * 1642 209 0 0 chr2 123503979 123504271 -127183583 + AluJo SINE Alu 1 292 -20 562 307 110 40 chr2 123504326 123504753 -127183101 + L2 LINE L2 2856 3312 -1 192 364 74 8 chr2 123505309 123505430 -127182424 - MIR SINE MIR -70 192 64 193 294 108 39 chr2 123506390 123506492 -127181362 + MER5B DNA MER1_type 49 157 -21 2244 99 17 3 chr2 123507263 123507565 -127180289 - AluSx SINE Alu -6 306 1 22 35 0 0 chr2 123507565 123507594 -127180260 + AT_rich Low_complexity Low_complexity 1 29 0 237 276 184 6 chr2 123510060 123510223 -127177631 - L2 LINE L2 -1 3271 3080 702 182 77 7 chr2 123510342 123510485 -127177369 - LTR32 LTR ERVL 0 471 319 1993 178 21 0 chr2 123510530 123510862 -127176992 - LTR32 LTR ERVL -119 352 14 1803 165 0 4 chr2 123511047 123511357 -127176497 + AluJo SINE Alu 9 317 0 354 280 98 0 chr2 123511720 123511852 -127176002 - MIR SINE MIR -10 252 108 293 151 30 15 chr2 123511856 123511964 -127175890 - MIR SINE MIR -93 169 14 336 202 4 130 chr2 123512232 123512268 -127175586 + L1MB7 LINE L1 6072 6111 -73 2226 133 0 0 chr2 123512268 123512570 -127175284 + AluSx SINE Alu 1 302 -10 336 202 4 130 chr2 123512570 123512648 -127175206 + L1MB7 LINE L1 6111 6183 -1 218 195 0 0 chr2 123513179 123513220 -127174634 + MIR SINE MIR 112 152 -110 219 297 94 59 chr2 123513515 123513717 -127174137 + L2 LINE L2 3104 3312 -1 346 122 0 0 chr2 123513763 123513812 -127174042 + Alu SINE Alu 4 52 -248 27 0 0 0 chr2 123514186 123514213 -127173641 + AT_rich Low_complexity Low_complexity 1 27 0 2145 119 0 0 chr2 123514820 123515144 -127172710 + AluSx SINE Alu 1 312 0 289 289 204 7 chr2 123516595 123516737 -127171117 - MIR SINE MIR -68 194 25 389 245 224 0 chr2 123517949 123518092 -127169762 + MER45A DNA AcHobo 4 178 0 1692 175 36 47 chr2 123519872 123520010 -127167844 + MLT1A1 LTR MaLR 10 148 -217 1936 176 14 74 chr2 123520010 123520220 -127167634 - MSTD LTR MaLR 0 396 222 2264 87 13 23 chr2 123520220 123520530 -127167324 - AluSp SINE Alu -6 307 1 1936 176 14 74 chr2 123520530 123520740 -127167114 - MSTD LTR MaLR -174 222 1 1692 175 36 47 chr2 123520740 123520961 -127166893 + MLT1A1 LTR MaLR 148 365 0 26 30 0 0 chr2 123521293 123521326 -127166528 + AT_rich Low_complexity Low_complexity 1 33 0 2542 96 27 13 chr2 123521326 123521702 -127166152 - L1PB2 LINE L1 -2 6206 5826 756 164 22 9 chr2 123521704 123521930 -127165924 + CT-rich Low_complexity Low_complexity 1 229 0 1904 157 33 0 chr2 123521930 123522229 -127165625 - AluSx SINE Alu -3 309 1 13873 223 14 30 chr2 123522229 123526369 -127161485 - L1PB2 LINE L1 -368 5840 1714 2159 127 10 0 chr2 123526369 123526669 -127161185 - AluSg SINE Alu -7 303 1 13873 223 14 30 chr2 123526669 123528043 -127159811 - L1PB2 LINE L1 -4494 1714 319 11333 121 23 51 chr2 123528056 123528278 -127159576 - Tigger1 DNA MER2_type -583 1835 1608 6432 100 24 0 chr2 123528278 123529410 -127158444 - L1PA12 LINE L1 0 6168 5026 11333 121 23 51 chr2 123529410 123530322 -127157532 - Tigger1 DNA MER2_type -810 1608 774 1748 91 5 0 chr2 123530322 123530543 -127157311 + AluY SINE Alu 1 222 -89 11333 121 23 51 chr2 123530543 123531296 -127156558 - Tigger1 DNA MER2_type -1644 774 1 845 250 19 10 chr2 123532854 123533062 -127154792 + LTR16C LTR ERVL 282 491 0 2223 158 37 0 chr2 123533665 123534039 -127153815 - MLT1B LTR MaLR -2 388 1 874 249 203 47 chr2 123534774 123535416 -127152438 - LTR50 LTR ERVL -2 793 52 461 174 20 10 chr2 123535439 123535537 -127152317 - MLT1A1 LTR MaLR -2 363 265 471 254 156 64 chr2 123537094 123537453 -127150401 + MLT1I LTR MaLR 10 401 -8 27949 29 1 1 chr2 123538085 123541394 -127146460 - L1P LINE L1 -1199 4947 1638 1793 194 0 7 chr2 123541498 123541802 -127146052 - MLT1A1 LTR MaLR -59 306 5 2528 152 9 41 chr2 123542066 123542106 -127145748 - MSTB LTR MaLR 0 426 386 2056 154 0 0 chr2 123542106 123542411 -127145443 + AluSg SINE Alu 1 305 -5 2528 152 9 41 chr2 123542411 123542810 -127145044 - MSTB LTR MaLR -40 386 1 8708 184 43 6 chr2 123542810 123544400 -127143454 - MSTB-int LTR MaLR 0 1651 2 2516 162 7 23 chr2 123544401 123544834 -127143020 - MSTB LTR MaLR 0 426 1 192 97 0 0 chr2 123545600 123545631 -127142223 + (TC)n Simple_repeat Simple_repeat 2 32 0 402 206 118 10 chr2 123545790 123545892 -127141962 + MER103 DNA DNA 10 122 -44 502 294 86 15 chr2 123547235 123547432 -127140422 + MIR SINE MIR 23 233 -29 27 0 0 0 chr2 123548384 123548411 -127139443 + AT_rich Low_complexity Low_complexity 1 27 0 925 213 55 10 chr2 123548431 123548633 -127139221 + Charlie1 DNA MER1_type 7 217 -2544 648 176 92 8 chr2 123548629 123548760 -127139094 + Charlie1 DNA MER1_type 2620 2761 0 * 566 279 30 0 chr2 123548947 123549112 -127138742 + MIR SINE MIR 18 187 -75 1004 235 82 94 chr2 123549133 123549643 -127138211 + LTR33 LTR ERVL 1 504 -17 358 306 37 8 chr2 123550463 123550597 -127137257 + MIR3 SINE MIR 67 204 -4 376 200 96 30 chr2 123550771 123550906 -127136948 - MLT1L LTR MaLR -4 611 468 207 265 15 15 chr2 123551063 123551131 -127136723 - MIR SINE MIR -98 164 97 318 305 156 51 chr2 123552216 123552511 -127135343 + L2 LINE L2 2926 3251 -21 272 253 126 0 chr2 123553011 123553106 -127134748 - MIR3 SINE MIR -54 154 48 627 317 45 36 chr2 123553433 123553853 -127134001 - L1ME4a LINE L1 -195 6206 5783 301 291 18 9 chr2 123553874 123553984 -127133870 - L1ME4a LINE L1 -2699 3727 3617 2652 185 2 12 chr2 123554039 123554525 -127133329 - L1ME4a LINE L1 -5924 502 22 380 130 14 0 chr2 123554559 123554628 -127133226 + CT-rich Low_complexity Low_complexity 4 73 0 21 36 0 0 chr2 123555066 123555094 -127132760 + AT_rich Low_complexity Low_complexity 1 28 0 253 289 116 31 chr2 123555147 123555531 -127132323 - L1MC/D LINE L1 -405 5759 5482 2133 102 0 42 chr2 123555677 123555990 -127131864 + AluSx SINE Alu 1 300 -12 5042 138 22 9 chr2 123556381 123557364 -127130490 - L1MA4A LINE L1 -28 7337 6281 22 0 0 0 chr2 123557816 123557838 -127130016 + AT_rich Low_complexity Low_complexity 1 22 0 6268 200 27 5 chr2 123557838 123559173 -127128681 - L1MA4A LINE L1 -897 6311 4948 230 0 33 0 chr2 123559173 123559203 -127128651 + (TTA)n Simple_repeat Simple_repeat 3 33 0 4096 78 4 11 chr2 123559203 123559757 -127128097 - L1PA7 LINE L1 -18 6136 5587 31791 113 36 60 chr2 123559881 123561641 -127126213 - L1P3 LINE L1 -371 5783 3983 1966 112 22 7 chr2 123561641 123561955 -127125899 - AluY SINE Alu 0 319 2 31791 113 36 60 chr2 123561955 123565722 -127122132 - L1P3 LINE L1 -2171 3983 417 189 0 0 0 chr2 123565722 123565743 -127122111 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 31791 113 36 60 chr2 123565743 123566140 -127121714 - L1P3 LINE L1 -5737 417 12 2563 198 39 19 chr2 123566151 123566722 -127121132 - L1MA4A LINE L1 -2245 4963 4382 2129 122 148 16 chr2 123566722 123567100 -127120754 + MSTA LTR MaLR 1 428 0 5300 193 32 1 chr2 123567100 123568070 -127119784 + MSTA-int LTR MaLR 1 1000 -651 704 106 9 9 chr2 123568066 123568179 -127119675 + MSTA-int LTR MaLR 1539 1651 0 * 491 151 0 0 chr2 123568179 123568252 -127119602 + MSTA LTR MaLR 1 73 -355 * 723 149 124 68 chr2 123568249 123568410 -127119444 + MSTA LTR MaLR 259 428 0 4091 189 35 67 chr2 123568410 123569539 -127118315 - L1MA4A LINE L1 -2822 4386 3295 486 106 0 0 chr2 123569658 123569724 -127118130 - Alu SINE Alu -15 295 230 10754 222 51 25 chr2 123569725 123572740 -127115114 - L1MA4A LINE L1 -3954 3255 19 238 343 19 19 chr2 123572901 123573006 -127114848 - MIR SINE MIR -147 115 11 188 336 84 0 chr2 123573018 123573137 -127114717 + L3 LINE CR1 1308 1436 -141 294 294 75 38 chr2 123573283 123573443 -127114411 + MIR3 SINE MIR 34 199 -9 370 272 257 23 chr2 123573947 123574293 -127113561 - L2 LINE L2 0 3313 2887 2261 140 16 56 chr2 123574372 123574489 -127113365 - L1MA7 LINE L1 -399 5892 5772 2189 119 3 3 chr2 123574489 123574791 -127113063 - AluSg SINE Alu -8 302 1 2261 140 16 56 chr2 123574791 123575101 -127112753 - L1MA7 LINE L1 -519 5772 5482 1109 252 138 16 chr2 123575106 123575877 -127111977 - L2 LINE L2 -13 3300 2434 305 223 29 19 chr2 123575942 123576045 -127111809 - L2 LINE L2 -1060 2254 2151 1119 184 109 14 chr2 123577169 123577452 -127110402 + MER33 DNA MER1_type 1 310 -14 654 138 26 2 chr2 123577623 123577740 -127110114 - MSTD LTR MaLR -236 129 1 1493 189 66 7 chr2 123577758 123578044 -127109810 + MLT1A1 LTR MaLR 1 303 -62 449 261 73 50 chr2 123579016 123579234 -127108620 - L2 LINE L2 -10 3303 3081 2332 108 0 19 chr2 123580156 123580470 -127107384 - AluSg SINE Alu -2 308 1 1139 221 11 0 chr2 123582573 123582840 -127105014 - L1MA9 LINE L1 -47 6265 5996 215 318 98 83 chr2 123584882 123585159 -127102695 - L2 LINE L2 -183 3089 2809 224 200 164 0 chr2 123586448 123586503 -127101351 + L2 LINE L2 2571 2634 -680 208 215 70 139 chr2 123586986 123587144 -127100710 + MIR SINE MIR 105 251 -11 476 200 8 0 chr2 123587171 123587291 -127100563 + GA-rich Low_complexity Low_complexity 2 122 0 269 317 137 14 chr2 123587586 123587870 -127099984 + L2 LINE L2 33 351 -2963 2875 278 186 24 chr2 123588038 123589843 -127098011 + L2 LINE L2 1100 3189 -124 2248 79 7 0 chr2 123591756 123592047 -127095807 - AluY SINE Alu -18 293 1 355 288 56 19 chr2 123592217 123592377 -127095477 + MIR SINE MIR 20 185 -77 208 275 25 12 chr2 123592406 123592486 -127095368 - MIR SINE MIR -73 135 55 784 169 25 30 chr2 123592567 123592768 -127095086 + Charlie5 DNA MER1_type 2423 2622 0 365 283 88 0 chr2 123593341 123593454 -127094400 - L2 LINE L2 -5 3308 3186 360 246 55 18 chr2 123593462 123593572 -127094282 - MLT1L LTR MaLR -5 610 497 294 164 0 0 chr2 123593846 123593901 -127093953 + (TTAGGG)n Simple_repeat Simple_repeat 4 58 0 204 292 77 23 chr2 123594834 123594964 -127092890 + L2 LINE L2 2316 2452 -862 407 353 35 12 chr2 123595296 123595329 -127092525 - MIR SINE MIR -22 240 209 1964 110 13 13 chr2 123595329 123595639 -127092215 - AluSq SINE Alu 0 313 4 407 353 35 12 chr2 123595639 123595778 -127092076 - MIR SINE MIR -53 209 64 4141 60 21 9 chr2 123597040 123597575 -127090279 + L1PA7 LINE L1 5614 6154 0 2089 121 0 16 chr2 123597930 123598236 -127089618 - AluSp SINE Alu -12 301 1 212 86 29 0 chr2 123598295 123598330 -127089524 + (TAA)n Simple_repeat Simple_repeat 2 37 0 674 221 8 0 chr2 123598334 123598465 -127089389 + FLAM_A SINE Alu 1 132 -1 710 287 48 0 chr2 123598888 123599097 -127088757 + MIR SINE MIR 44 262 0 211 244 90 51 chr2 123599640 123599718 -127088136 + MIR SINE MIR 91 171 -91 2911 147 11 0 chr2 123600647 123601109 -127086745 + MLT1C LTR MaLR 1 467 0 2305 182 29 0 chr2 123601109 123601683 -127086171 + MLT1C-int LTR MaLR 1 709 -662 350 149 14 68 chr2 123601677 123601751 -127086103 + MLT1C-int LTR MaLR 827 896 -475 * 3312 253 67 58 chr2 123601966 123603177 -127084677 + MER89-int LTR ERV1 146 1367 -5434 2854 90 80 0 chr2 123603898 123604375 -127083479 + L1PBa LINE L1 2478 2992 -3870 441 272 219 18 chr2 123605045 123605269 -127082585 + MLT1K LTR MaLR 231 499 -89 194 180 20 60 chr2 123605952 123606002 -127081852 + L2 LINE L2 3187 3234 -38 371 305 113 59 chr2 123606311 123606567 -127081287 + L2 LINE L2 3002 3271 -1 474 306 82 41 chr2 123607731 123607999 -127079855 + L2 LINE L2 1994 2272 -1042 1373 202 19 6 chr2 123607999 123608316 -127079538 + MER33 DNA MER1_type 4 324 0 377 192 10 29 chr2 123608354 123608458 -127079396 + MER33 DNA MER1_type 262 363 0 666 302 172 22 chr2 123608556 123609361 -127078493 + L2 LINE L2 2397 3313 0 2529 129 11 0 chr2 123609471 123609842 -127078012 - THE1C LTR MaLR 0 375 1 218 222 0 19 chr2 123610811 123610865 -127076989 - L2 LINE L2 -2 3311 3259 207 362 95 9 chr2 123611169 123611285 -127076569 + L3 LINE CR1 260 385 -1192 1212 224 61 21 chr2 123611515 123611845 -127076009 - MER2 DNA MER2_type 0 344 2 1581 164 57 88 chr2 123612320 123612704 -127075150 - MLT1A2 LTR MaLR 0 374 3 508 326 174 28 chr2 123612907 123613446 -127074408 + L2 LINE L2 550 1167 -2147 670 222 49 32 chr2 123614802 123614987 -127072867 + MIR SINE MIR 50 237 -25 720 284 100 7 chr2 123614987 123615463 -127072391 + LTR50 LTR ERVL 1 663 -132 2523 149 159 10 chr2 123615463 123615946 -127071908 + MER68 LTR ERV1 1 555 -7 267 182 26 65 chr2 123615986 123616063 -127071791 + LTR33A LTR ERVL 455 515 -8 1803 78 4 0 chr2 123616094 123616324 -127071530 + AluSp SINE Alu 1 231 -82 280 124 15 47 chr2 123616357 123616425 -127071429 + AluSp SINE Alu 234 277 -26 1211 323 68 56 chr2 123616918 123617045 -127070809 + ERVL LTR ERVL 785 909 -4855 2372 210 14 14 chr2 123617045 123617550 -127070304 + MLT1D LTR MaLR 1 505 0 1211 323 68 56 chr2 123617550 123618439 -127069415 + ERVL LTR ERVL 909 1813 -3951 327 298 34 80 chr2 123618407 123618645 -127069209 + ERVL LTR ERVL 1753 1979 -3017 * 697 252 31 59 chr2 123618657 123618879 -127068975 + ERVL LTR ERVL 2115 2330 -3434 765 234 102 21 chr2 123619060 123619295 -127068559 + MIR SINE MIR 8 261 -1 282 283 150 0 chr2 123619785 123619898 -127067956 - MIR SINE MIR -8 254 125 636 302 72 22 chr2 123619939 123620161 -127067693 - MIR SINE MIR -9 253 21 259 305 105 0 chr2 123620834 123620929 -127066925 + L2 LINE L2 3151 3255 -17 299 250 16 0 chr2 123621772 123621836 -127066018 + MIR3 SINE MIR 115 179 -29 1118 206 28 5 chr2 123622405 123622623 -127065231 - MER58A DNA MER1_type 0 224 2 343 318 144 0 chr2 123623073 123623246 -127064608 + MIR3 SINE MIR 9 206 -2 390 333 53 8 chr2 123623520 123623652 -127064202 + L2 LINE L2 3127 3264 -8 246 252 108 18 chr2 123623879 123623990 -127063864 - MIR SINE MIR -13 249 129 578 337 74 31 chr2 123625199 123625617 -127062237 + L2 LINE L2 2836 3271 -1 317 285 80 22 chr2 123625790 123625927 -127061927 + L1MC4a LINE L1 6044 6188 -1620 273 344 76 8 chr2 123625977 123626108 -127061746 + MIR SINE MIR 33 172 -90 1523 213 86 12 chr2 123626252 123626741 -127061113 + MER90 LTR ERV1 90 614 0 294 290 11 21 chr2 123626741 123626834 -127061020 + MIR SINE MIR 170 261 -1 2597 206 12 52 chr2 123627013 123627590 -127060264 - MLT2B3 LTR ERVL 0 554 1 421 199 199 0 chr2 123628138 123628274 -127059580 + L1ME4a LINE L1 5957 6119 -2 208 274 115 26 chr2 123629398 123629511 -127058343 - L2 LINE L2 0 3313 3191 23 0 0 0 chr2 123629908 123629931 -127057923 + AT_rich Low_complexity Low_complexity 1 23 0 768 278 10 15 chr2 123630465 123630670 -127057184 - MIR SINE MIR -29 233 30 240 196 22 0 chr2 123630810 123630856 -127056998 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 204 328 133 16 chr2 123630900 123631028 -127056826 + MIR SINE MIR 12 154 -108 26 0 0 0 chr2 123631038 123631064 -127056790 + AT_rich Low_complexity Low_complexity 1 26 0 246 108 27 135 chr2 123631064 123631112 -127056742 - L1MA8 LINE L1 -4 6287 6248 2184 106 0 10 chr2 123631112 123631424 -127056430 - AluSq SINE Alu -4 309 1 246 108 27 135 chr2 123631424 123631449 -127056405 - L1MA8 LINE L1 -43 6248 6222 640 270 94 76 chr2 123631761 123632142 -127055712 - MLT1I LTR MaLR 0 409 22 456 259 46 6 chr2 123632787 123632932 -127054922 + MIR SINE MIR 112 262 0 1921 117 47 0 chr2 123633047 123633345 -127054509 + AluSx SINE Alu 1 312 0 272 326 38 8 chr2 123634128 123634260 -127053594 - MIR SINE MIR 0 262 127 410 237 172 47 chr2 123634283 123634452 -127053402 - L2 LINE L2 -75 3197 3008 291 290 82 62 chr2 123634667 123635057 -127052797 - L2 LINE L2 -360 2954 2557 306 338 26 13 chr2 123636780 123636931 -127050923 + MIR SINE MIR 94 246 -16 743 201 101 0 chr2 123637886 123638055 -127049799 - MER5A DNA MER1_type -3 186 1 427 291 8 0 chr2 123638762 123638879 -127048975 + MIR SINE MIR 118 235 -27 300 284 100 32 chr2 123639602 123639792 -127048062 - MIR SINE MIR -6 256 54 372 191 0 0 chr2 123640588 123640672 -127047182 + (TG)n Simple_repeat Simple_repeat 2 85 0 209 40 0 0 chr2 123640672 123640697 -127047157 + (TA)n Simple_repeat Simple_repeat 2 26 0 14851 52 1 22 chr2 123642246 123644937 -127042917 - L1PA5 LINE L1 0 6154 3499 1291 189 37 4 chr2 123645446 123645690 -127042164 - L1MC1 LINE L1 -13 6320 6069 476 76 51 32 chr2 123645690 123645847 -127042007 + (TA)n Simple_repeat Simple_repeat 1 160 0 445 135 77 19 chr2 123645861 123646017 -127041837 + (TATAA)n Simple_repeat Simple_repeat 5 169 0 707 60 11 60 chr2 123646023 123646208 -127041646 + (TA)n Simple_repeat Simple_repeat 2 177 0 285 115 54 31 chr2 123646228 123646358 -127041496 + (TTATA)n Simple_repeat Simple_repeat 5 137 0 197 157 78 0 chr2 123646362 123646413 -127041441 + MIR SINE MIR 129 183 -79 226 337 20 10 chr2 123646804 123646902 -127040952 - L2 LINE L2 -31 3282 3184 1221 317 95 21 chr2 123648067 123648968 -127038886 - L2 LINE L2 -613 2701 1734 362 287 62 31 chr2 123649441 123649570 -127038284 - MIR SINE MIR -82 180 48 1260 168 13 0 chr2 123652583 123652809 -127035045 + MLT2B1 LTR ERVL 1 229 -291 780 247 101 50 chr2 123652838 123652987 -127034867 + MLT1A1 LTR MaLR 5 145 -229 2219 130 3 0 chr2 123652987 123653295 -127034559 + AluSg SINE Alu 1 309 -1 780 247 101 50 chr2 123653295 123653576 -127034278 + MLT1A1 LTR MaLR 145 372 -2 353 293 45 38 chr2 123653729 123653862 -127033992 + L2 LINE L2 3139 3272 0 209 250 0 0 chr2 123654254 123654302 -127033552 + L2 LINE L2 3225 3272 0 437 342 52 10 chr2 123654469 123654662 -127033192 - MIR SINE MIR -39 223 23 348 360 9 0 chr2 123655375 123655489 -127032365 - L3 LINE CR1 -23 1554 1440 729 61 0 0 chr2 123655938 123656037 -127031817 + (TCCA)n Simple_repeat Simple_repeat 2 100 0 1040 168 0 0 chr2 123656755 123656916 -127030938 - Tigger2 DNA MER2_type -5 2713 2553 * 1159 161 0 0 chr2 123656900 123657092 -127030762 - Tigger2 DNA MER2_type -2524 194 3 3445 311 56 25 chr2 123657132 123658624 -127029230 - ERVL LTR ERVL -394 5370 3833 337 308 204 13 chr2 123658653 123658961 -127028893 + ERVL LTR ERVL 503 869 -4785 3857 132 38 58 chr2 123659347 123660052 -127027802 - LTR8 LTR ERV1 0 691 1 774 303 109 59 chr2 123661581 123662093 -127025761 - MLT1K LTR MaLR -11 577 40 349 268 78 42 chr2 123662203 123662345 -127025509 + MER117 DNA MER1_type 51 197 0 216 200 22 0 chr2 123665876 123665921 -127021933 + GA-rich Low_complexity Low_complexity 2 47 0 194 307 53 0 chr2 123666812 123666887 -127020967 + MIR SINE MIR 63 141 -121 21 82 0 0 chr2 123667787 123667836 -127020018 + AT_rich Low_complexity Low_complexity 1 49 0 421 346 75 13 chr2 123667852 123668080 -127019774 - MIR SINE MIR -1 261 20 282 143 0 0 chr2 123668665 123668714 -127019140 + (TTC)n Simple_repeat Simple_repeat 3 51 0 2029 130 3 35 chr2 123668716 123669032 -127018822 - AluSc SINE Alu -3 306 1 336 291 133 12 chr2 123669368 123669533 -127018321 + MIR SINE MIR 40 224 -38 203 309 49 25 chr2 123670345 123670426 -127017428 - L3b LINE CR1 -93 1490 1408 2184 130 39 33 chr2 123671219 123671581 -127016273 + THE1B LTR MaLR 1 364 0 337 331 94 32 chr2 123671657 123672029 -127015825 - MLT1L LTR MaLR -2 613 219 196 286 0 39 chr2 123673278 123673355 -127014499 + MIR SINE MIR 81 154 -108 1634 227 21 24 chr2 123673360 123673735 -127014119 - MLT1A2 LTR MaLR 0 374 1 1497 185 51 20 chr2 123673836 123674188 -127013666 + MLT1A1 LTR MaLR 3 365 0 192 353 43 0 chr2 123674482 123674598 -127013256 - MIR SINE MIR -48 214 94 410 280 43 39 chr2 123675199 123675456 -127012398 + MLT1H LTR MaLR 84 341 -208 214 207 52 17 chr2 123676216 123676274 -127011580 - MIR SINE MIR -89 119 60 313 232 53 42 chr2 123676324 123676419 -127011435 - MIR SINE MIR -62 200 105 368 208 14 125 chr2 123676656 123676712 -127011142 + Charlie8 DNA MER1_type 51 112 -229 2585 61 0 10 chr2 123676712 123677023 -127010831 + AluY SINE Alu 1 308 -3 368 208 14 125 chr2 123677023 123677110 -127010744 + Charlie8 DNA MER1_type 112 178 -163 207 236 0 18 chr2 123677605 123677660 -127010194 + (TAA)n Simple_repeat Simple_repeat 1 54 0 231 224 0 0 chr2 123678154 123678207 -127009647 + CT-rich Low_complexity Low_complexity 3 56 0 2270 120 35 16 chr2 123678207 123678573 -127009281 + THE1C LTR MaLR 3 375 0 372 316 128 0 chr2 123678944 123679140 -127008714 + MIR SINE MIR 30 250 -12 235 161 36 18 chr2 123679846 123679902 -127007952 + (CAAA)n Simple_repeat Simple_repeat 1 57 0 489 14 0 41 chr2 123680148 123680221 -127007633 + (TG)n Simple_repeat Simple_repeat 1 70 0 878 213 71 1 chr2 123680995 123681260 -127006594 + MER45B DNA AcHobo 1 318 -722 1466 172 15 0 chr2 123681283 123681551 -127006303 + MER45B DNA AcHobo 606 877 -163 729 100 0 0 chr2 123682135 123682235 -127005619 - AluSg SINE Alu -7 305 206 1263 103 0 0 chr2 123682235 123682391 -127005463 - AluSg SINE Alu -154 156 1 433 281 51 28 chr2 123682396 123682574 -127005280 + MER5A DNA MER1_type 1 182 -7 186 171 0 0 chr2 123682926 123682967 -127004887 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 218 296 80 24 chr2 123683245 123683370 -127004484 - L2 LINE L2 -225 3047 2916 2238 117 0 0 chr2 123683627 123683917 -127003937 + AluSg SINE Alu 1 290 -20 273 316 86 34 chr2 123684031 123684265 -127003589 - L2 LINE L2 -842 2472 2227 405 281 105 59 chr2 123684832 123685070 -127002784 + MIR SINE MIR 2 250 -12 190 303 67 72 chr2 123685097 123685292 -127002562 - L2 LINE L2 -205 3067 2874 454 376 28 5 chr2 123685792 123686005 -127001849 - MIR SINE MIR -17 245 28 303 329 86 7 chr2 123687285 123687437 -127000417 - MIR SINE MIR -31 231 68 384 294 48 51 chr2 123687613 123687846 -127000008 + MIR SINE MIR 13 250 -12 185 294 41 108 chr2 123687936 123688130 -126999724 + MIR SINE MIR 4 184 -78 787 255 54 107 chr2 123688686 123688955 -126998899 - L2 LINE L2 -98 3215 2933 2191 142 86 15 chr2 123688955 123689364 -126998490 + L1MA7 LINE L1 5849 6286 -5 787 255 54 107 chr2 123689364 123689745 -126998109 - L2 LINE L2 -380 2933 2602 194 279 103 0 chr2 123689800 123689868 -126997986 + L2 LINE L2 3238 3312 -1 599 209 8 169 chr2 123689906 123690160 -126997694 + MIR SINE MIR 48 260 -2 424 383 1 11 chr2 123691100 123691301 -126996553 + MIR SINE MIR 32 230 -32 196 247 129 35 chr2 123692907 123692992 -126994862 - MIR SINE MIR -58 204 112 375 77 0 0 chr2 123693049 123693101 -126994753 - MER49 LTR ERV1 -270 653 602 265 257 119 18 chr2 123693382 123693491 -126994363 - MER72 LTR ERV1 -592 130 11 328 260 10 75 chr2 123693497 123693624 -126994230 - MIR SINE MIR -69 139 18 2515 249 33 21 chr2 123694347 123695071 -126992783 + MER89-int LTR ERV1 1800 2532 -4269 1303 234 27 7 chr2 123695512 123695807 -126992047 + MER89-int LTR ERV1 3428 3728 -3073 269 232 0 0 chr2 123695866 123695922 -126991932 - MER2 DNA MER2_type -21 324 269 609 167 0 0 chr2 123696083 123696185 -126991669 - MER2 DNA MER2_type -191 154 53 329 265 69 20 chr2 123696268 123696370 -126991484 + MLT1A1 LTR MaLR 164 270 -95 217 284 0 54 chr2 123697047 123697121 -126990733 + L2 LINE L2 3239 3308 -5 262 369 101 0 chr2 123697407 123697556 -126990298 + MIR3 SINE MIR 30 193 -15 304 346 33 33 chr2 123697909 123698062 -126989792 + MIR SINE MIR 48 200 -62 2325 91 6 25 chr2 123698171 123698489 -126989365 - AluSq SINE Alu -1 312 1 372 308 92 30 chr2 123700926 123701153 -126986701 + MIR SINE MIR 15 259 -3 21 36 0 0 chr2 123702690 123702718 -126985136 + AT_rich Low_complexity Low_complexity 1 28 0 913 201 93 0 chr2 123703298 123703502 -126984352 + MER58A DNA MER1_type 2 224 0 863 200 103 0 chr2 123703521 123703716 -126984138 + MER8 DNA MER2_type 24 238 -1 482 176 49 0 chr2 123703739 123703841 -126984013 - L1ME3A LINE L1 -31 6208 6102 401 312 96 20 chr2 123703881 123704279 -126983575 - L1ME3A LINE L1 -2006 5871 5444 935 300 97 51 chr2 123704461 123704594 -126983260 - L1MEc LINE L1 -2744 3471 3345 7796 19 0 0 chr2 123704594 123705604 -126982250 - L1PA2 LINE L1 0 6155 5146 935 300 97 51 chr2 123705604 123706874 -126980980 - L1MEc LINE L1 -2870 3345 2036 329 364 68 0 chr2 123707090 123707252 -126980602 - HAL1 LINE L1 -80 2427 2255 251 239 49 18 chr2 123707384 123707547 -126980307 + (TA)n Simple_repeat Simple_repeat 1 168 0 974 186 80 45 chr2 123707578 123707792 -126980062 - L1MB7 LINE L1 -42 6142 5916 1838 115 4 0 chr2 123707792 123708044 -126979810 + AluSp SINE Alu 50 302 -11 974 186 80 45 chr2 123708044 123708093 -126979761 - L1MB7 LINE L1 -268 5916 5870 * 1217 177 28 4 chr2 123708087 123708335 -126979519 + L1MB5 LINE L1 5611 5864 -310 238 119 95 0 chr2 123709134 123709176 -126978678 + L1M4 LINE L1 5746 5791 -383 522 159 30 30 chr2 123709191 123709323 -126978531 - L1MC1 LINE L1 -2 6331 6200 33 0 0 0 chr2 123709376 123709409 -126978445 + AT_rich Low_complexity Low_complexity 1 33 0 4729 131 21 12 chr2 123709428 123710244 -126977610 - L1MC1 LINE L1 -150 6183 5361 207 69 0 0 chr2 123710380 123710409 -126977445 + (TTTTTA)n Simple_repeat Simple_repeat 3 31 0 222 431 0 8 chr2 123711734 123711864 -126975990 + MIR3 SINE MIR 3 131 -77 238 263 35 0 chr2 123711967 123712024 -126975830 - L2 LINE L2 -2 3311 3253 326 343 71 7 chr2 123713023 123713163 -126974691 - L2 LINE L2 -5 3267 3119 * 590 316 19 5 chr2 123713151 123713363 -126974491 - L2 LINE L2 -2295 1019 805 268 232 49 24 chr2 123713366 123713448 -126974406 + MER112 DNA MER1_type 1 84 -176 189 312 0 0 chr2 123713518 123713595 -126974259 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 300 247 0 45 chr2 123713622 123713711 -126974143 + L1MC4 LINE L1 6614 6698 -1344 339 271 47 0 chr2 123713823 123713908 -126973946 - L1MC4 LINE L1 -1339 6703 6615 321 278 0 22 chr2 123713920 123714010 -126973844 - L1MC4 LINE L1 -1340 6702 6615 324 242 22 44 chr2 123714038 123714129 -126973725 - L1MC4 LINE L1 -1340 6702 6614 343 272 0 22 chr2 123714147 123714239 -126973615 - L1MC4 LINE L1 -1339 6703 6614 300 330 17 17 chr2 123714249 123714367 -126973487 - L1MC4 LINE L1 -1339 6703 6586 219 188 0 0 chr2 123714369 123714417 -126973437 + (CATATA)n Simple_repeat Simple_repeat 2 49 0 322 210 0 110 chr2 123714417 123714517 -126973337 - L1MC4 LINE L1 -1339 6703 6615 209 235 0 12 chr2 123714518 123714599 -126973255 + (TA)n Simple_repeat Simple_repeat 2 81 0 310 269 0 43 chr2 123714608 123714701 -126973153 - L1MC4 LINE L1 -1340 6702 6614 207 247 0 0 chr2 123714704 123714777 -126973077 + (TA)n Simple_repeat Simple_repeat 2 74 0 318 283 0 22 chr2 123714785 123714877 -126972977 - L1MC4 LINE L1 -1339 6703 6614 311 266 0 43 chr2 123714917 123715011 -126972843 - L1MC4 LINE L1 -1339 6703 6614 * 334 245 0 43 chr2 123714981 123715075 -126972779 - L1MC4 LINE L1 -1339 6703 6614 233 270 0 0 chr2 123715076 123715139 -126972715 + (CATATA)n Simple_repeat Simple_repeat 5 67 0 323 267 23 0 chr2 123715140 123715226 -126972628 - L1MC4 LINE L1 -1340 6702 6615 306 194 0 0 chr2 123715228 123715300 -126972554 + (TA)n Simple_repeat Simple_repeat 1 72 0 380 250 10 0 chr2 123715306 123715410 -126972444 + MER112 DNA MER1_type 66 170 -90 1024 301 115 32 chr2 123715473 123716133 -126971721 - L2 LINE L2 -2521 793 79 2319 50 33 26 chr2 123717033 123717335 -126970519 + AluY SINE Alu 1 304 -7 202 262 0 0 chr2 123717576 123717618 -126970236 + MIR SINE MIR 110 151 -57 2470 65 0 0 chr2 123718032 123718339 -126969515 - AluY SINE Alu -4 307 1 334 292 25 17 chr2 123718949 123719069 -126968785 + MIR SINE MIR 137 257 -5 364 276 134 28 chr2 123719194 123719448 -126968406 - L1MC4 LINE L1 -19 8023 7743 1021 285 72 14 chr2 123719622 123720123 -126967731 - L1MC4a LINE L1 -1740 6068 5539 2329 114 0 0 chr2 123720467 123720764 -126967090 + AluSg SINE Alu 7 303 -7 272 293 117 99 chr2 123721211 123721563 -126966291 - L2 LINE L2 -1 3271 2914 24 0 0 0 chr2 123722133 123722157 -126965697 + AT_rich Low_complexity Low_complexity 1 24 0 1590 57 31 0 chr2 123722407 123722634 -126965220 - L1PA4 LINE L1 -3 6152 5919 423 279 113 86 chr2 123723706 123724230 -126963624 - L1MC4a LINE L1 -2088 4058 3521 302 271 117 50 chr2 123724475 123725451 -126962403 - L1MC4a LINE L1 -2915 3231 2191 3708 148 38 72 chr2 123725473 123726145 -126961709 - L1MB4 LINE L1 0 6180 5487 1783 169 6 20 chr2 123726145 123726489 -126961365 - MER44D DNA MER2_type 0 609 1 3708 148 38 72 chr2 123726489 123726687 -126961167 - L1MB4 LINE L1 -693 5487 5331 2119 147 39 22 chr2 123726687 123726834 -126961020 + L1MA4 LINE L1 5882 6025 -275 3511 129 19 6 chr2 123726834 123727354 -126960500 + MER1A DNA MER1_type 1 527 0 2119 147 39 22 chr2 123727354 123727613 -126960241 + L1MA4 LINE L1 6025 6295 -5 3708 148 38 72 chr2 123727613 123727844 -126960010 - L1MB4 LINE L1 -849 5331 5094 501 226 90 73 chr2 123727967 123728201 -126959653 + L1 LINE L1 4790 5027 -1119 279 295 99 31 chr2 123728568 123728890 -126958964 - HAL1 LINE L1 -785 1722 1379 191 146 24 0 chr2 123729044 123729085 -126958769 + CT-rich Low_complexity Low_complexity 2 43 0 2451 80 0 0 chr2 123729089 123729389 -126958465 - AluSc SINE Alu -9 300 1 27 29 0 0 chr2 123729522 123729556 -126958298 + AT_rich Low_complexity Low_complexity 1 34 0 370 275 29 62 chr2 123729748 123730024 -126957830 - L1ME3A LINE L1 -225 5945 5679 232 273 43 56 chr2 123730021 123730417 -126957437 - L1ME3A LINE L1 -848 5298 4908 * 1097 43 50 0 chr2 123730620 123730760 -126957094 + L1PB1 LINE L1 6004 6150 -1 198 71 0 0 chr2 123730768 123730796 -126957058 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 26 0 0 0 chr2 123731026 123731052 -126956802 + AT_rich Low_complexity Low_complexity 1 26 0 2213 113 10 0 chr2 123731927 123732227 -126955627 - AluSq SINE Alu -10 303 1 279 349 48 16 chr2 123732286 123732412 -126955442 + MIR SINE MIR 30 159 -103 31 44 0 0 chr2 123732499 123732544 -126955310 + AT_rich Low_complexity Low_complexity 1 45 0 309 268 276 0 chr2 123732657 123732784 -126955070 + MER5A DNA MER1_type 21 182 -7 207 337 74 0 chr2 123733943 123734038 -126953816 - L2 LINE L2 -281 2991 2890 602 288 8 68 chr2 123734064 123734328 -126953526 + MER112 DNA MER1_type 1 248 -12 266 334 54 29 chr2 123734617 123734791 -126953063 - MIR SINE MIR -66 142 17 231 216 0 0 chr2 123735318 123735369 -126952485 - L2 LINE L2 -1 3312 3262 493 252 49 70 chr2 123736117 123736403 -126951451 - HAL1 LINE L1 0 2507 2228 333 260 138 8 chr2 123736456 123736579 -126951275 - L2 LINE L2 -426 2888 2750 1210 281 68 69 chr2 123736582 123737348 -126950506 - L2 LINE L2 -737 2577 1813 592 322 86 36 chr2 123737451 123737889 -126949965 - L2 LINE L2 -243 3029 2563 423 300 88 0 chr2 123739559 123739719 -126948135 - MIR SINE MIR -15 247 74 227 199 21 192 chr2 123739779 123740066 -126947788 - L1MC5 LINE L1 -102 7859 7622 17295 203 19 27 chr2 123740133 123742097 -126945757 + L1P4 LINE L1 1838 3817 -3786 328 152 30 45 chr2 123742097 123742163 -126945691 - Alu SINE Alu -5 297 241 17295 203 19 27 chr2 123742163 123744090 -126943764 + L1P4 LINE L1 3817 5758 -1845 2363 108 60 23 chr2 123744090 123744441 -126943413 - THE1B LTR MaLR 0 364 1 17295 203 19 27 chr2 123744441 123745819 -126942035 + L1P4 LINE L1 5758 7120 -483 1845 168 0 7 chr2 123745819 123746122 -126941732 + AluSx SINE Alu 1 301 -11 17295 203 19 27 chr2 123746122 123746217 -126941637 + L1P4 LINE L1 7120 7214 -389 4173 118 56 15 chr2 123746424 123746692 -126941162 + L1PA15 LINE L1 5382 5637 -528 1626 177 10 10 chr2 123746692 123746992 -126940862 + AluSx SINE Alu 2 301 -11 4173 118 56 15 chr2 123746992 123747476 -126940378 + L1PA15 LINE L1 5637 6165 0 442 285 14 49 chr2 123747486 123747770 -126940084 - L1MC5 LINE L1 -417 7544 7271 760 224 25 37 chr2 123747874 123748129 -126939725 - L1MC4 LINE L1 -738 7223 7000 3048 116 13 22 chr2 123750104 123750553 -126937301 - MER65A LTR ERV1 0 445 1 255 286 153 15 chr2 123751057 123751253 -126936601 + L2 LINE L2 2709 2931 -383 470 193 3 6 chr2 123751381 123751478 -126936376 - L1MC2 LINE L1 -67 7718 6166 222 37 0 0 chr2 123751478 123751505 -126936349 + (ATG)n Simple_repeat Simple_repeat 2 28 0 1188 185 16 118 chr2 123751513 123751827 -126936027 - AluJo SINE Alu -30 282 1 4683 146 44 38 chr2 123751827 123752203 -126935651 - L1MC2 LINE L1 -174 6170 5798 2237 86 3 3 chr2 123752203 123752495 -126935359 - AluY SINE Alu -19 292 1 4683 146 44 38 chr2 123752495 123753076 -126934778 - L1MC2 LINE L1 -546 5798 5207 2158 86 3 40 chr2 123753103 123753405 -126934449 + AluY SINE Alu 1 291 -20 4280 70 2 0 chr2 123753407 123753919 -126933935 + L1PA5 LINE L1 5629 6141 -13 550 88 0 0 chr2 123754005 123754085 -126933769 + AluSc SINE Alu 230 309 0 1638 151 90 25 chr2 123754093 123754458 -126933396 + L1MC2 LINE L1 5782 6170 -174 945 173 30 18 chr2 123754458 123754626 -126933228 + AluJo SINE Alu 1 170 -142 745 226 14 27 chr2 123754626 123754772 -126933082 + AluJo/FRAM SINE Alu 139 282 -30 270 0 0 0 chr2 123754780 123754810 -126933044 + (CAT)n Simple_repeat Simple_repeat 2 31 0 493 175 103 0 chr2 123754810 123754907 -126932947 + L1MC2 LINE L1 6166 6272 -72 251 291 153 15 chr2 123755035 123755231 -126932623 - L2 LINE L2 -383 2931 2709 234 0 0 0 chr2 123755625 123755651 -126932203 + (CA)n Simple_repeat Simple_repeat 2 27 0 255 187 11 0 chr2 123757207 123757286 -126930568 + Alu SINE Alu 246 292 -9 202 200 0 0 chr2 123757310 123757345 -126930509 + CT-rich Low_complexity Low_complexity 6 40 0 285 307 63 16 chr2 123757581 123757708 -126930146 - L2 LINE L2 0 3272 3140 189 74 0 0 chr2 123757851 123757878 -126929976 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 687 281 165 16 chr2 123757932 123758280 -126929574 - L2 LINE L2 -163 3150 2763 786 298 166 9 chr2 123758283 123758867 -126928987 - L2 LINE L2 -669 2645 1970 1185 176 23 14 chr2 123759057 123759273 -126928581 - MLT1A1 LTR MaLR -4 361 144 793 228 13 0 chr2 123759546 123759704 -126928150 - MLT1A1 LTR MaLR -205 160 1 375 283 175 0 chr2 123760239 123760359 -126927495 + Charlie8 DNA MER1_type 21 161 -2256 25 31 0 0 chr2 123760598 123760630 -126927224 + AT_rich Low_complexity Low_complexity 1 32 0 1010 196 72 98 chr2 123760814 123761201 -126926653 + MER34B LTR ERV1 5 381 -184 1528 0 0 0 chr2 123761245 123761404 -126926450 - L1PA3 LINE L1 0 6155 5997 310 205 24 12 chr2 123761471 123761554 -126926300 + MER34 LTR ERV1 459 542 0 1202 148 6 0 chr2 123762052 123762234 -126925620 - MER105 DNA DNA -7 197 15 449 243 88 7 chr2 123762668 123762804 -126925050 - MIR SINE MIR -65 197 51 231 114 0 0 chr2 123763578 123763622 -126924232 + (TC)n Simple_repeat Simple_repeat 1 44 0 305 186 29 14 chr2 123763673 123763743 -126924111 + LTR16A1 LTR ERVL 387 457 0 225 294 82 62 chr2 123763824 123764018 -126923836 + MIR SINE MIR 20 217 -45 195 330 5 95 chr2 123764866 123765087 -126922767 + L2 LINE L2 2899 3099 -173 1949 144 10 0 chr2 123765175 123765467 -126922387 + AluJb SINE Alu 1 295 -17 197 250 0 0 chr2 123765492 123765536 -126922318 + MIR SINE MIR 217 260 -2 206 274 20 0 chr2 123765559 123765610 -126922244 - L2 LINE L2 -16 3297 3246 556 154 19 10 chr2 123765686 123765790 -126922064 + L2 LINE L2 3209 3313 0 183 373 0 15 chr2 123767720 123767787 -126920067 - MIR SINE MIR -180 82 17 362 153 28 28 chr2 123768318 123768390 -126919464 + MIR SINE MIR 83 154 -108 843 264 15 5 chr2 123768576 123768777 -126919077 + MER20 DNA MER1_type 1 203 -16 213 39 0 0 chr2 123769184 123769210 -126918644 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 230 138 17 0 chr2 123770140 123770198 -126917656 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 450 316 47 21 chr2 123770322 123770512 -126917342 + MIR SINE MIR 47 241 -21 478 296 14 7 chr2 123771013 123771155 -126916699 + MIR SINE MIR 65 207 -55 22 35 0 0 chr2 123771457 123771486 -126916368 + AT_rich Low_complexity Low_complexity 1 29 0 197 319 106 11 chr2 123772167 123772261 -126915593 - L2 LINE L2 0 3272 3170 846 134 0 22 chr2 123772427 123772561 -126915293 + FLAM_C SINE Alu 3 133 0 300 267 93 0 chr2 123773333 123773419 -126914435 - MIR SINE MIR -122 140 47 2553 126 2 31 chr2 123773557 123773970 -126913884 - L1MA2 LINE L1 0 6304 5904 259 309 96 0 chr2 123774822 123774916 -126912938 + L2 LINE L2 2715 2817 -497 1535 206 52 43 chr2 123775209 123775578 -126912276 + MLT1A2 LTR MaLR 3 374 0 497 273 43 62 chr2 123776251 123776460 -126911394 + MLT1J2 LTR MaLR 24 228 -222 258 217 50 0 chr2 123776636 123776696 -126911158 + L2 LINE L2 3251 3313 0 309 149 0 0 chr2 123777414 123777461 -126910393 + L2 LINE L2 3262 3308 -5 2350 132 21 29 chr2 123778402 123778780 -126909074 + THE1C LTR MaLR 1 375 0 1298 160 0 0 chr2 123778961 123779167 -126908687 - AluSg/x SINE Alu -1 311 106 234 71 0 0 chr2 123779186 123779214 -126908640 + LTR45B LTR ERV1 462 489 0 411 281 110 0 chr2 123779426 123779572 -126908282 + MIR SINE MIR 34 195 -67 829 156 0 33 chr2 123780733 123780991 -126906863 + MSTC LTR MaLR 1 311 -117 728 181 161 13 chr2 123781318 123781473 -126906381 + MLT1B LTR MaLR 210 387 -3 208 239 0 0 chr2 123781601 123781647 -126906207 + (CAA)n Simple_repeat Simple_repeat 1 46 0 392 298 135 31 chr2 123781711 123782037 -126905817 - MLT1J2 LTR MaLR -27 423 64 277 321 52 60 chr2 123782150 123782284 -126905570 - MIR SINE MIR -110 152 20 300 316 0 0 chr2 123782356 123782451 -126905403 - MER103 DNA DNA 0 166 72 273 287 178 8 chr2 123783252 123783381 -126904473 - MIR SINE MIR -7 255 105 252 0 0 0 chr2 123783925 123783953 -126903901 + (TG)n Simple_repeat Simple_repeat 2 29 0 1588 190 91 52 chr2 123784081 123784523 -126903331 + MLT1C LTR MaLR 6 464 -3 303 275 12 0 chr2 123785460 123785540 -126902314 + MLT1K LTR MaLR 81 161 -427 502 232 47 138 chr2 123785650 123786033 -126901821 - L2 LINE L2 0 3313 2966 40473 35 23 4 chr2 123786289 123788793 -126899061 - L1PA2 LINE L1 -158 5997 3542 2840 10 0 0 chr2 123788793 123789102 -126898752 - AluYa5 SINE Alu -1 310 2 40473 35 23 4 chr2 123789102 123792478 -126895376 - L1PA2 LINE L1 -2613 3542 1 844 251 72 46 chr2 123792487 123792794 -126895060 - L2 LINE L2 -905 2409 2095 4464 240 45 37 chr2 123792825 123793456 -126894398 + L1M4 LINE L1 2436 3060 -3086 1588 183 3 51 chr2 123793456 123793767 -126894087 + AluJo SINE Alu 17 312 0 4464 240 45 37 chr2 123793767 123795633 -126892221 + L1M4 LINE L1 3060 5288 -858 1973 196 75 55 chr2 123795633 123796128 -126891726 + MLT1D LTR MaLR 1 505 0 2029 245 65 50 chr2 123796128 123796751 -126891103 + MLT1D-int LTR MaLR 1 641 -730 2324 79 0 3 chr2 123796751 123797042 -126890812 + AluY SINE Alu 1 290 -21 2029 245 65 50 chr2 123797042 123797255 -126890599 + MLT1D-int LTR MaLR 641 849 -522 226 233 0 0 chr2 123797264 123797324 -126890530 + A-rich Low_complexity Low_complexity 1 60 0 308 109 0 0 chr2 123797602 123797648 -126890206 - MADE1 DNA Mariner -34 46 1 377 266 86 46 chr2 123797648 123797828 -126890026 - MIR SINE MIR -51 157 14 284 330 44 11 chr2 123798298 123798389 -126889465 + MIR SINE MIR 5 98 -164 401 282 94 39 chr2 123799252 123799433 -126888421 - MIR SINE MIR -8 254 64 286 258 11 11 chr2 123799602 123799695 -126888159 + CT-rich Low_complexity Low_complexity 3 95 0 2222 74 11 14 chr2 123800244 123800550 -126887304 + AluSc SINE Alu 5 309 0 307 308 26 42 chr2 123801428 123801570 -126886284 + MIR SINE MIR 19 161 -47 265 54 0 0 chr2 123804191 123804228 -126883626 - L1MA8 LINE L1 -188 6103 6067 424 290 55 30 chr2 123804842 123805042 -126882812 - MIR SINE MIR -56 206 2 2045 262 125 55 chr2 123805485 123805860 -126881994 - L2 LINE L2 -1 3312 2965 1695 193 25 19 chr2 123805860 123806223 -126881631 - MLT1A1 LTR MaLR 0 365 1 2045 262 125 55 chr2 123806223 123807191 -126880663 - L2 LINE L2 -348 2965 1875 23 0 0 0 chr2 123807531 123807554 -126880300 + AT_rich Low_complexity Low_complexity 1 23 0 529 49 25 0 chr2 123809731 123809812 -126878042 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 195 261 0 0 chr2 123809960 123810006 -126877848 - L2 LINE L2 -5 3308 3263 23 54 0 0 chr2 123810814 123810851 -126877003 + AT_rich Low_complexity Low_complexity 1 37 0 1891 136 72 33 chr2 123811199 123811560 -126876294 - THE1C LTR MaLR 0 375 1 9566 134 12 42 chr2 123811560 123813188 -126874666 - THE1C-int LTR MaLR 0 1580 3 1305 151 149 120 chr2 123813190 123813606 -126874248 - MSTA LTR MaLR 0 428 1 974 275 95 61 chr2 123813606 123815094 -126872760 + L1ME LINE L1 465 1974 -4106 1506 189 40 30 chr2 123815229 123815531 -126872323 + AluJb SINE Alu 1 305 -7 284 372 7 21 chr2 123815941 123816086 -126871768 - MIR SINE MIR -118 144 2 369 287 72 48 chr2 123816266 123816517 -126871337 + L1ME4a LINE L1 5860 6116 -5 534 13 40 0 chr2 123817163 123817238 -126870616 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 225 328 25 25 chr2 123817463 123817582 -126870272 + MIR3 SINE MIR 47 165 -43 255 258 34 22 chr2 123817672 123817761 -126870093 + MIR SINE MIR 163 252 -10 220 228 5 16 chr2 123818125 123818186 -126869668 + MIR3 SINE MIR 94 155 -53 348 332 114 52 chr2 123818460 123818731 -126869123 + L2 LINE L2 2985 3272 0 5616 50 6 1 chr2 123820238 123820944 -126866910 - L1PA7 LINE L1 0 6154 5446 660 72 3 0 chr2 123820944 123821051 -126866803 + L1PA7 LINE L1 5354 5462 -689 422 219 41 41 chr2 123821254 123821377 -126866477 + MLT1I LTR MaLR 286 408 -1 552 293 91 35 chr2 123823210 123823551 -126864303 + LTR33 LTR ERVL 147 506 -15 2257 57 0 4 chr2 123824017 123824297 -126863557 - L1PA6 LINE L1 -14 6140 5862 317 185 0 0 chr2 123824297 123824351 -126863503 + MIR SINE MIR 102 155 -107 2117 117 3 13 chr2 123824602 123824923 -126862931 + AluSx SINE Alu 1 312 0 328 368 34 0 chr2 123826388 123826505 -126861349 - L2 LINE L2 -9 3304 3184 2180 117 0 7 chr2 123826587 123826887 -126860967 - AluSx SINE Alu -14 298 1 411 311 107 10 chr2 123827265 123827461 -126860393 - MIR SINE MIR -3 259 45 201 302 0 81 chr2 123827968 123828054 -126859800 - L2 LINE L2 -8 3264 3186 573 115 0 0 chr2 123828244 123828331 -126859523 - MER74A LTR ERVL -2 556 470 3639 135 31 64 chr2 123828342 123829044 -126858810 + LTR8 LTR ERV1 13 691 0 2289 201 29 10 chr2 123829044 123829511 -126858343 - MER74A LTR ERVL -81 477 2 193 341 75 35 chr2 123829739 123829912 -126857942 - L2 LINE L2 -648 2666 2487 2333 140 13 10 chr2 123830111 123830503 -126857351 - THE1-int LTR MaLR -170 1410 1018 1221 199 68 0 chr2 123830503 123830769 -126857085 - MST-int LTR MaLR -1014 637 354 377 125 24 20 chr2 123830769 123830849 -126857005 - MSTA LTR MaLR -269 86 1 221 83 28 0 chr2 123831614 123831650 -126856204 + (TTA)n Simple_repeat Simple_repeat 3 39 0 25 75 0 0 chr2 123832365 123832418 -126855436 + AT_rich Low_complexity Low_complexity 1 53 0 3435 127 40 33 chr2 123832785 123833038 -126854816 - LTR26 LTR ERV1 0 603 353 2545 52 3 3 chr2 123833038 123833348 -126854506 + AluY SINE Alu 1 310 -1 3435 127 40 33 chr2 123833348 123833693 -126854161 - LTR26 LTR ERV1 -250 353 1 24 0 0 0 chr2 123834069 123834093 -126853761 + AT_rich Low_complexity Low_complexity 1 24 0 2547 62 0 0 chr2 123834633 123834940 -126852914 - AluY SINE Alu -4 307 1 325 302 101 47 chr2 123835251 123835283 -126852571 - MIR3 SINE MIR -6 202 173 1873 128 48 65 chr2 123835283 123835522 -126852332 - MLT1B LTR MaLR 0 390 159 2368 87 3 3 chr2 123835522 123835832 -126852022 + AluSg SINE Alu 1 310 0 1873 128 48 65 chr2 123835832 123835989 -126851865 - MLT1B LTR MaLR -231 159 1 325 302 101 47 chr2 123835989 123836105 -126851749 - MIR3 SINE MIR -35 173 46 181 267 43 0 chr2 123836351 123836467 -126851387 + (TG)n Simple_repeat Simple_repeat 2 122 0 426 184 14 35 chr2 123836511 123836652 -126851202 + (TG)n Simple_repeat Simple_repeat 1 138 0 2393 89 0 0 chr2 123837138 123837442 -126850412 - AluSg SINE Alu -6 304 1 1857 205 8 92 chr2 123838698 123838849 -126849005 + MLT2B3 LTR ERVL 1 163 -391 2560 55 0 0 chr2 123838849 123839156 -126848698 + AluY SINE Alu 1 307 -4 1857 205 8 92 chr2 123839156 123839506 -126848348 + MLT2B3 LTR ERVL 163 460 -94 184 250 18 54 chr2 123840341 123840397 -126847457 + MIR SINE MIR 92 145 -117 2407 98 0 0 chr2 123840598 123840904 -126846950 + AluSx SINE Alu 1 306 -6 1764 154 99 3 chr2 123840917 123841249 -126846605 + MLT1A1 LTR MaLR 2 365 0 2305 110 0 0 chr2 123841760 123842061 -126845793 - AluSx SINE Alu -11 301 1 806 226 53 0 chr2 123843491 123843699 -126844155 - MER20 DNA MER1_type 0 219 1 297 241 0 0 chr2 123843840 123843952 -126843902 + (CA)n Simple_repeat Simple_repeat 1 112 0 243 211 78 102 chr2 123844272 123844400 -126843454 + MIR SINE MIR 18 142 -66 195 42 0 0 chr2 123844990 123845014 -126842840 + (CA)n Simple_repeat Simple_repeat 1 24 0 24 0 0 0 chr2 123845715 123845739 -126842115 + AT_rich Low_complexity Low_complexity 1 24 0 384 324 37 7 chr2 123845743 123845879 -126841975 + MIR SINE MIR 28 167 -95 * 864 351 126 18 chr2 123845869 123846726 -126841128 + L2 LINE L2 1142 2091 -1223 660 310 128 25 chr2 123846823 123847191 -126840663 + L2 LINE L2 2453 2858 -456 400 38 0 0 chr2 123847473 123847517 -126840337 + L1PA6 LINE L1 6096 6142 -12 219 36 0 0 chr2 123847517 123847545 -126840309 + (TA)n Simple_repeat Simple_repeat 2 29 0 571 291 18 32 chr2 123847878 123848160 -126839694 - L1MC4a LINE L1 -1913 5895 5618 309 177 0 65 chr2 123848264 123848326 -126839528 - L2 LINE L2 0 3272 3215 247 258 0 0 chr2 123848350 123848412 -126839442 - MER63 DNA MER1_type -280 781 720 21 36 0 0 chr2 123848431 123848459 -126839395 + AT_rich Low_complexity Low_complexity 1 28 0 440 153 51 0 chr2 123848477 123848614 -126839240 + (TG)n Simple_repeat Simple_repeat 1 144 0 720 266 81 13 chr2 123848614 123848933 -126838921 - L2 LINE L2 -216 3097 2745 1160 235 84 3 chr2 123848937 123849235 -126838619 + MLT1A1 LTR MaLR 1 322 -43 243 140 80 20 chr2 123849287 123849337 -126838517 - L2 LINE L2 -574 2740 2688 335 356 24 15 chr2 123849340 123849545 -126838309 - L1MC4a LINE L1 -766 5380 5174 2167 105 3 0 chr2 123849643 123849958 -126837896 + L1PA13 LINE L1 5845 6160 -3 503 271 0 0 chr2 123850119 123850237 -126837617 + MER58A DNA MER1_type 2 119 0 21 57 0 0 chr2 123850317 123850352 -126837502 + AT_rich Low_complexity Low_complexity 1 35 0 225 293 61 17 chr2 123850640 123850821 -126837033 - L1MC4a LINE L1 -1581 4565 4377 317 285 64 43 chr2 123851100 123851426 -126836428 - L1MC4a LINE L1 -2162 3984 3652 498 250 68 7 chr2 123851459 123851607 -126836247 + MLT1B LTR MaLR 1 157 -233 354 250 0 11 chr2 123851686 123851774 -126836080 + MLT1B LTR MaLR 196 282 -92 1969 149 51 28 chr2 123851810 123852166 -126835688 - THE1B LTR MaLR 0 364 1 314 229 10 0 chr2 123852170 123852266 -126835588 + CT-rich Low_complexity Low_complexity 2 98 0 242 315 27 0 chr2 123852329 123852402 -126835452 + MIR SINE MIR 60 134 -128 255 61 0 0 chr2 123852704 123852737 -126835117 + (GA)n Simple_repeat Simple_repeat 2 34 0 258 296 35 9 chr2 123853300 123853415 -126834439 + L2 LINE L2 2932 3049 -223 325 278 103 16 chr2 123853991 123854117 -126833737 + MIR SINE MIR 126 262 0 193 265 49 68 chr2 123855626 123855748 -126832106 - MER5A DNA MER1_type 0 178 65 336 291 54 20 chr2 123856358 123856506 -126831348 + L1MC4 LINE L1 5578 5730 -391 1921 134 0 24 chr2 123856653 123856951 -126830903 + AluSg SINE Alu 1 291 -19 271 293 0 27 chr2 123858127 123858202 -126829652 + polypyrimidine Low_complexity Low_complexity 4 76 0 376 240 10 0 chr2 123858806 123858902 -126828952 - MER94 DNA DNA -29 105 9 21 36 0 0 chr2 123859529 123859557 -126828297 + AT_rich Low_complexity Low_complexity 1 28 0 239 289 50 63 chr2 123859672 123859831 -126828023 - MIR3 SINE MIR -30 178 22 502 114 30 12 chr2 123860120 123860218 -126827636 + MLT1A2 LTR MaLR 1 99 -275 692 185 51 19 chr2 123860224 123860381 -126827473 + LTR40a LTR ERVL 358 519 0 268 307 42 12 chr2 123860530 123860696 -126827158 + L1MC4 LINE L1 5717 5887 -1921 414 298 176 62 chr2 123860737 123861157 -126826697 - L2 LINE L2 0 3313 2846 225 151 0 38 chr2 123861311 123861364 -126826490 + L1MC4 LINE L1 6652 6702 -1340 206 191 24 0 chr2 123862019 123862061 -126825793 + (TA)n Simple_repeat Simple_repeat 2 44 0 207 185 19 37 chr2 123862640 123862694 -126825160 - L2 LINE L2 0 3313 3261 331 366 11 29 chr2 123863723 123863898 -126823956 - MER5A DNA MER1_type -11 178 7 214 277 50 89 chr2 123864584 123864685 -126823169 + MIR SINE MIR 159 255 -7 22 35 0 0 chr2 123865213 123865242 -126822612 + AT_rich Low_complexity Low_complexity 1 29 0 2298 119 3 60 chr2 123865792 123866178 -126821676 - THE1B LTR MaLR 0 364 1 1910 177 0 0 chr2 123866193 123866498 -126821356 - AluSx SINE Alu -7 305 1 1281 185 18 105 chr2 123866592 123866921 -126820933 + MLT1A1 LTR MaLR 1 290 -75 1573 182 7 42 chr2 123866921 123867228 -126820626 - AluJo SINE Alu -16 296 1 1281 185 18 105 chr2 123867228 123867298 -126820556 + MLT1A1 LTR MaLR 290 365 0 180 111 0 0 chr2 123867771 123867798 -126820056 + (GA)n Simple_repeat Simple_repeat 2 28 0 452 344 26 7 chr2 123868035 123868186 -126819668 + MIR SINE MIR 12 165 -97 208 192 27 27 chr2 123868348 123868421 -126819433 + (TCTA)n Simple_repeat Simple_repeat 3 75 0 23 0 0 0 chr2 123869456 123869479 -126818375 + AT_rich Low_complexity Low_complexity 1 23 0 209 330 93 21 chr2 123871003 123871100 -126816754 + MIR SINE MIR 3 106 -156 249 244 94 87 chr2 123872262 123872389 -126815465 + MIR SINE MIR 112 239 -23 489 17 0 0 chr2 123873328 123873386 -126814468 + (TG)n Simple_repeat Simple_repeat 2 59 0 216 0 0 0 chr2 123875626 123875650 -126812204 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 316 320 56 35 chr2 123876675 123876906 -126810948 + L1ME LINE L1 1348 1583 -5051 231 323 68 0 chr2 123876931 123877064 -126810790 + L1ME LINE L1 1522 1663 -4879 213 39 0 0 chr2 123877206 123877232 -126810622 + (T)n Simple_repeat Simple_repeat 1 26 0 1044 129 53 0 chr2 123877232 123877403 -126810451 - THE1-int LTR MaLR -130 1450 1271 2398 56 0 17 chr2 123877403 123877705 -126810149 - AluY SINE Alu -9 302 6 2138 138 3 0 chr2 123877942 123878253 -126809601 + AluSx SINE Alu 1 312 0 440 349 40 1 chr2 123878261 123878473 -126809381 + MIR SINE MIR 35 252 -10 770 237 58 39 chr2 123878473 123878730 -126809124 - MIR SINE MIR 0 262 1 235 354 0 0 chr2 123879091 123879173 -126808681 - MLT1G3 LTR MaLR -235 295 214 865 266 61 47 chr2 123879301 123879744 -126808110 - MLT1H1 LTR MaLR -33 522 74 245 336 37 30 chr2 123879933 123880067 -126807787 + LTR16A LTR ERVL 114 248 -202 387 313 47 47 chr2 123880602 123880813 -126807041 + L1ME LINE L1 2039 2249 -4576 2985 278 109 31 chr2 123881098 123884455 -126803399 + L1ME LINE L1 2573 6236 -432 2515 50 3 3 chr2 123884455 123884752 -126803102 + AluY SINE Alu 7 303 -8 2985 278 109 31 chr2 123884752 123885222 -126802632 + L1ME LINE L1 6236 6668 0 626 194 0 8 chr2 123885641 123885770 -126802084 + L1M4c LINE L1 10 137 -6405 2175 247 31 25 chr2 123885779 123886361 -126801493 + L1M4c LINE L1 368 956 -5586 2122 127 36 28 chr2 123886361 123886722 -126801132 - THE1B LTR MaLR 0 364 1 2175 247 31 25 chr2 123886722 123886822 -126801032 + L1M4c LINE L1 956 1054 -5488 1897 169 38 5 chr2 123886839 123887258 -126800596 - L1MA7 LINE L1 -5 6286 5854 576 132 18 0 chr2 123887258 123887372 -126800482 + L1 LINE L1 5089 5204 -942 8017 203 40 23 chr2 123887375 123888958 -126798896 - L1MB1 LINE L1 -342 7266 5640 423 0 0 0 chr2 123888958 123889005 -126798849 + (CA)n Simple_repeat Simple_repeat 2 48 0 8017 203 40 23 chr2 123889005 123889741 -126798113 - L1MB1 LINE L1 -1968 5640 4918 1622 250 59 36 chr2 123889736 123890826 -126797028 - L1MB1 LINE L1 -3787 3778 2785 * 25 31 0 0 chr2 123890827 123890859 -126796995 + AT_rich Low_complexity Low_complexity 1 32 0 539 205 43 0 chr2 123890859 123891044 -126796810 + L1M4c LINE L1 2430 2622 -4024 758 154 18 17 chr2 123891045 123891322 -126796532 + Tigger2a DNA MER2_type 1 364 -80 2049 245 32 0 chr2 123891333 123891950 -126795904 + L1M4c LINE L1 2668 3304 -3340 793 235 76 23 chr2 123891947 123892105 -126795749 + L1M4c LINE L1 4468 4647 -1997 * 2260 143 50 26 chr2 123892105 123892523 -126795331 - MSTA LTR MaLR 0 428 1 793 235 76 23 chr2 123892523 123892628 -126795226 + L1M4c LINE L1 4647 4745 -1899 * 939 340 30 9 chr2 123892627 123893068 -126794786 + L1M2 LINE L1 1 450 -6399 364 318 112 62 chr2 123893572 123893751 -126794103 + L1M2 LINE L1 598 785 -6064 952 254 39 46 chr2 123893781 123894065 -126793789 + L1PA16 LINE L1 452 733 -6116 2614 231 27 13 chr2 123894532 123895440 -126792414 + L1PA16 LINE L1 1423 2421 -4428 2017 215 34 28 chr2 123895441 123896004 -126791850 + L1 LINE L1 4189 4754 -1392 260 192 0 0 chr2 123896027 123896079 -126791775 + L1 LINE L1 4702 4753 -1393 4929 150 26 6 chr2 123896133 123896641 -126791213 + L1PA16 LINE L1 4751 5247 -919 2180 151 22 6 chr2 123896641 123896999 -126790855 - THE1B LTR MaLR 0 364 1 4929 150 26 6 chr2 123896999 123897886 -126789968 + L1PA16 LINE L1 5247 6157 -9 1563 196 73 0 chr2 123897898 123898256 -126789598 + L1PA16 LINE L1 2410 2793 -4056 * 8414 212 37 13 chr2 123898252 123900760 -126787094 + L1PA16 LINE L1 3730 6296 -573 1379 208 6 3 chr2 123900758 123901071 -126786783 - L1P LINE L1 -1218 4928 4615 * 2693 152 99 4 chr2 123901077 123901623 -126786231 + L1PA16 LINE L1 6269 6866 -3 1410 264 45 5 chr2 123901617 123901640 -126786214 + L1MB7 LINE L1 4233 4254 -1892 * 207 0 0 0 chr2 123901640 123901663 -126786191 + (CA)n Simple_repeat Simple_repeat 2 24 0 1410 264 45 5 chr2 123901663 123902233 -126785621 + L1MB7 LINE L1 4254 4895 -1251 1903 199 42 7 chr2 123902235 123902668 -126785186 + L1MB7 LINE L1 5718 6165 -19 730 249 19 49 chr2 123902709 123902914 -126784940 - MIR SINE MIR -36 226 28 296 298 84 8 chr2 123902941 123903072 -126784782 - MIR SINE MIR -38 224 84 398 339 33 17 chr2 123903806 123903986 -126783868 + MIR SINE MIR 69 251 -11 207 259 19 0 chr2 123904185 123904239 -126783615 - L3 LINE CR1 -376 1201 1147 1064 206 99 2 chr2 123904244 123904650 -126783204 - MER74A LTR ERVL 0 558 47 392 239 97 22 chr2 123904704 123904849 -126783005 + MIR SINE MIR 41 191 -71 937 301 46 46 chr2 123904930 123905322 -126782532 - L2 LINE L2 -42 3271 2880 2118 212 119 29 chr2 123905340 123906005 -126781849 + MER50 LTR ERV1 10 734 0 1312 286 58 60 chr2 123906009 123906727 -126781127 - L2 LINE L2 -448 2866 2150 433 204 65 143 chr2 123906802 123907047 -126780807 + L2 LINE L2 3087 3312 -1 729 268 12 0 chr2 123907944 123908112 -126779742 - MER5A DNA MER1_type -2 187 18 390 350 78 19 chr2 123908799 123909005 -126778849 - MIR SINE MIR -10 252 35 909 256 0 33 chr2 123909172 123909446 -126778408 - MLT1E LTR MaLR 0 593 329 686 314 57 41 chr2 123909445 123909811 -126778043 - MLT1E LTR MaLR -221 372 1 * 308 256 107 41 chr2 123910888 123911009 -126776845 + MIR SINE MIR 21 149 -113 822 210 16 5 chr2 123912471 123912657 -126775197 - MER20 DNA MER1_type -1 218 31 414 0 0 0 chr2 123912976 123913022 -126774832 + (CA)n Simple_repeat Simple_repeat 2 47 0 2367 238 41 15 chr2 123913208 123913814 -126774040 - MLT1E2 LTR MaLR 0 626 5 1595 218 86 13 chr2 123913916 123914459 -126773395 - L1MD3 LINE L1 -1 7872 7182 273 57 0 0 chr2 123914597 123914632 -126773222 + (GA)n Simple_repeat Simple_repeat 2 36 0 1166 226 3 66 chr2 123915510 123915860 -126771994 + MLT2C1 LTR ERVL 15 342 -55 232 365 0 0 chr2 123915860 123915956 -126771898 + (TA)n Simple_repeat Simple_repeat 2 97 0 744 316 50 18 chr2 123916063 123916459 -126771395 - HERV16 LTR ERVL -4583 413 5 983 296 66 20 chr2 123916463 123916897 -126770957 - LTR16A LTR ERVL 0 450 1 519 313 36 42 chr2 123918016 123918323 -126769531 + MLT1K LTR MaLR 279 583 -5 396 335 71 0 chr2 123918485 123918640 -126769214 + MIR3 SINE MIR 38 203 -5 360 0 0 0 chr2 123919268 123919308 -126768546 + (TG)n Simple_repeat Simple_repeat 1 40 0 1051 20 40 0 chr2 123919887 123920036 -126767818 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 769 286 61 0 chr2 123920235 123920480 -126767374 + MIR SINE MIR 3 262 0 540 267 116 6 chr2 123920544 123920716 -126767138 + MIR SINE MIR 23 213 -49 605 282 6 0 chr2 123921939 123922095 -126765759 + MLT1I LTR MaLR 34 190 -219 354 186 0 0 chr2 123922208 123922278 -126765576 + MLT1I LTR MaLR 336 405 -4 441 330 59 4 chr2 123923417 123923656 -126764198 + MER110 LTR ERV1 171 422 -69 465 240 49 66 chr2 123924472 123924655 -126763199 - MIR SINE MIR -69 193 14 2230 97 7 0 chr2 123924742 123925066 -126762788 - AluSx SINE Alu 0 312 1 294 106 0 0 chr2 123926543 123926590 -126761264 + (TG)n Simple_repeat Simple_repeat 2 48 0 593 178 93 0 chr2 123927539 123927668 -126760186 + L1MD3 LINE L1 7730 7870 -125 1784 186 99 14 chr2 123927668 123928284 -126759570 - MER39 LTR ERV1 0 707 1 493 220 17 0 chr2 123928286 123928404 -126759450 + L1MD3 LINE L1 7870 7989 -6 1723 102 4 0 chr2 123928547 123928782 -126759072 - AluY SINE Alu -15 296 61 566 290 151 54 chr2 123929585 123929702 -126758152 - L2 LINE L2 0 3313 3209 252 0 0 0 chr2 123929702 123929730 -126758124 + (TG)n Simple_repeat Simple_repeat 2 29 0 566 290 151 54 chr2 123929730 123930057 -126757797 - L2 LINE L2 -104 3209 2826 591 271 96 46 chr2 123931549 123931829 -126756025 + Charlie2 DNA MER1_type 18 311 -2471 283 219 263 0 chr2 123931976 123932113 -126755741 + Charlie2a DNA MER1_type 1487 1659 -1203 229 197 33 0 chr2 123932135 123932196 -126755658 + Charlie2a DNA MER1_type 2728 2790 -72 1019 229 92 13 chr2 123933506 123933821 -126754033 + MER58B DNA MER1_type 1 340 -1 249 335 173 0 chr2 123934314 123934568 -126753286 + L2 LINE L2 1792 2089 -1225 2468 87 0 48 chr2 123935483 123935918 -126751936 + L1P LINE L1 2873 3286 -2860 5650 256 114 13 chr2 123935920 123936955 -126750899 - L1M4 LINE L1 -1318 5064 4135 2497 66 3 0 chr2 123936955 123937259 -126750595 + AluY SINE Alu 1 305 -6 5650 256 114 13 chr2 123937259 123938701 -126749153 - L1M4 LINE L1 -2247 4135 2330 288 293 30 18 chr2 123938967 123939134 -126748720 - L1MEc LINE L1 -1488 4727 4559 2047 152 3 0 chr2 123939167 123939477 -126748377 + AluSx SINE Alu 1 311 -1 389 256 164 34 chr2 123939523 123939785 -126748069 - L1MEc LINE L1 -1701 4514 4219 515 307 58 41 chr2 123939789 123940355 -126747499 - L1MEc LINE L1 -2052 4163 3588 348 316 39 46 chr2 123940595 123940877 -126746977 - L1MEc LINE L1 -2839 3376 3097 668 139 0 8 chr2 123940889 123941011 -126746843 + (TTCC)n Simple_repeat Simple_repeat 1 121 0 1412 195 70 0 chr2 123941011 123941283 -126746571 - AluJo SINE Alu -19 293 3 233 306 81 12 chr2 123941393 123941553 -126746301 - L1MEc LINE L1 -3239 2976 2806 445 312 124 30 chr2 123941734 123942138 -126745716 - L1MEc LINE L1 -3594 2621 2180 235 165 193 46 chr2 123942554 123942663 -126745191 + HsTC2 DNA Tc2 1752 1876 -22 23 33 0 0 chr2 123942939 123942969 -126744885 + AT_rich Low_complexity Low_complexity 1 30 0 301 301 122 25 chr2 123943283 123943479 -126744375 - MLT1K LTR MaLR -188 400 186 306 308 58 10 chr2 123946150 123946254 -126741600 + L2 LINE L2 3121 3229 -43 353 108 16 44 chr2 123946733 123946822 -126741032 + L1PA14 LINE L1 5784 5834 -329 2143 120 12 0 chr2 123946858 123947191 -126740663 + L1PA14 LINE L1 5824 6160 -1 2109 173 5 17 chr2 123947191 123947606 -126740248 + L1MB3 LINE L1 5770 6181 -2 942 183 0 6 chr2 123947613 123947793 -126740061 + L1MB3 LINE L1 6002 6180 -3 1708 167 0 17 chr2 123948585 123948878 -126738976 + AluJb SINE Alu 1 288 -24 276 208 366 0 chr2 123949162 123949263 -126738591 + MER46C DNA MER2_type 79 216 -122 190 293 0 0 chr2 123949337 123949378 -126738476 + L2 LINE L2 3221 3261 -11 180 0 0 0 chr2 123949896 123949916 -126737938 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 3710 272 42 30 chr2 123950605 123951285 -126736569 - L1MEc LINE L1 -4890 1506 836 2276 106 0 3 chr2 123951285 123951586 -126736268 - AluSc SINE Alu -9 300 1 3710 272 42 30 chr2 123951586 123952341 -126735513 - L1MEc LINE L1 -5560 836 53 327 369 0 0 chr2 123953960 123954082 -126733772 + (TG)n Simple_repeat Simple_repeat 1 122 0 3906 27 13 8 chr2 123954249 123954727 -126733127 + L1PA3 LINE L1 5676 6155 0 300 262 85 53 chr2 123955222 123955409 -126732445 + MLT1J2 LTR MaLR 74 260 -149 354 331 66 0 chr2 123955657 123955778 -126732076 + L2 LINE L2 3142 3270 -2 485 367 50 24 chr2 123955815 123956068 -126731786 + MIR SINE MIR 9 262 0 3049 181 132 4 chr2 123956194 123956878 -126730976 - LTR48 LTR ERV1 0 787 17 22 0 0 0 chr2 123957354 123957376 -126730478 + AT_rich Low_complexity Low_complexity 1 22 0 251 281 180 0 chr2 123958605 123958694 -126729160 - MIR SINE MIR -72 190 86 683 263 11 6 chr2 123958853 123959028 -126728826 - MER69A DNA AcHobo -1 176 1 226 220 0 0 chr2 123959484 123959534 -126728320 + (TG)n Simple_repeat Simple_repeat 1 50 0 204 200 0 0 chr2 123959534 123959584 -126728270 + (TA)n Simple_repeat Simple_repeat 1 50 0 2056 123 17 31 chr2 123960409 123960477 -126727377 + L1MA6 LINE L1 5947 6014 -286 3724 124 12 14 chr2 123960477 123961043 -126726811 + MER61E LTR ERV1 1 565 -4 2056 123 17 31 chr2 123961043 123961333 -126726521 + L1MA6 LINE L1 6014 6300 0 280 406 51 0 chr2 123962520 123962658 -126725196 - L2 LINE L2 -4 3268 3124 277 190 0 17 chr2 123962822 123962880 -126724974 + LTR40a LTR ERVL 91 147 -372 289 230 75 91 chr2 123963099 123963286 -126724568 + LTR40a LTR ERVL 246 429 -90 1904 197 72 21 chr2 123963405 123963837 -126724017 + MLT1C LTR MaLR 1 454 -13 733 333 84 19 chr2 123964593 123965116 -126722738 + L2 LINE L2 1973 2529 -785 29 60 0 0 chr2 123965145 123965195 -126722659 + AT_rich Low_complexity Low_complexity 1 50 0 655 264 60 50 chr2 123965247 123965546 -126722308 - MLT1L LTR MaLR -155 460 159 999 181 31 62 chr2 123966231 123966457 -126721397 - MER20 DNA MER1_type 0 219 1 336 241 63 92 chr2 123966486 123966619 -126721235 + MLT1I LTR MaLR 36 164 -245 2374 71 0 26 chr2 123966619 123966927 -126720927 + AluY SINE Alu 1 300 -11 336 241 63 92 chr2 123966927 123966967 -126720887 + MLT1I LTR MaLR 164 204 -205 470 359 19 69 chr2 123967183 123967503 -126720351 + L2 LINE L2 2575 2878 -436 2571 64 0 0 chr2 123968351 123968662 -126719192 + AluY SINE Alu 1 311 0 315 279 31 62 chr2 123968732 123968893 -126718961 - MIR SINE MIR -72 190 35 223 296 174 21 chr2 123969576 123969781 -126718073 + MIR SINE MIR 10 242 -20 899 158 28 6 chr2 123970604 123970781 -126717073 + L1M4 LINE L1 5222 5402 -744 21 0 0 0 chr2 123970910 123970931 -126716923 + AT_rich Low_complexity Low_complexity 1 21 0 2319 85 10 3 chr2 123971025 123971319 -126716535 + AluSx SINE Alu 1 296 -16 383 255 38 28 chr2 123971466 123971572 -126716282 - L3 LINE CR1 -42 1535 1429 384 22 0 0 chr2 123972726 123972771 -126715083 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 308 149 68 14 chr2 123972783 123972857 -126714997 - L1MA9 LINE L1 -34 6278 6201 714 324 148 5 chr2 123972887 123973260 -126714594 + MER69 DNA AcHobo 143 568 -658 * 1529 243 51 16 chr2 123973247 123973757 -126714097 + MER69 DNA AcHobo 1999 2526 0 202 279 66 0 chr2 123973859 123973920 -126713934 + L2 LINE L2 3203 3267 -5 701 132 72 26 chr2 123974676 123974828 -126713026 + MER53 DNA DNA 30 188 -1 234 331 25 37 chr2 123975392 123975555 -126712299 + MIR SINE MIR 100 260 -2 2154 113 0 0 chr2 123975610 123975924 -126711930 + AluSx SINE Alu 1 314 0 189 147 0 0 chr2 123976233 123976267 -126711587 + (T)n Simple_repeat Simple_repeat 1 34 0 405 0 0 0 chr2 123976486 123976531 -126711323 + (TA)n Simple_repeat Simple_repeat 2 46 0 301 382 11 14 chr2 123977889 123978047 -126709807 + MIR3 SINE MIR 14 173 -62 24 0 0 0 chr2 123978590 123978614 -126709240 + AT_rich Low_complexity Low_complexity 1 24 0 467 101 13 0 chr2 123979024 123979103 -126708751 + (TG)n Simple_repeat Simple_repeat 1 80 0 1061 189 70 5 chr2 123980000 123980201 -126707653 + Tigger7 DNA MER2_type 53 266 -284 607 192 0 0 chr2 123980199 123980298 -126707556 + Tigger7 DNA MER2_type 2393 2491 0 * 186 263 0 0 chr2 123980518 123980575 -126707279 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 331 278 108 70 chr2 123980578 123980965 -126706889 - L2 LINE L2 -134 3179 2773 456 323 12 67 chr2 123980988 123981229 -126706625 - MIR SINE MIR -2 260 28 1654 199 26 20 chr2 123981352 123981703 -126706151 + MLT1A1 LTR MaLR 1 353 -12 467 284 168 0 chr2 123981872 123982062 -126705792 - LTR16A LTR ERVL -57 393 172 182 296 130 37 chr2 123983650 123983758 -126704096 - L2 LINE L2 0 3272 3155 274 381 106 8 chr2 123984003 123984239 -126703615 - L2 LINE L2 -357 2957 2699 230 228 88 81 chr2 123984266 123984402 -126703452 - MER112 DNA MER1_type -32 228 92 358 298 45 118 chr2 123984717 123985117 -126702737 + L2 LINE L2 2943 3313 0 211 289 0 84 chr2 123986034 123986117 -126701737 + MIR SINE MIR 10 85 -177 316 319 28 28 chr2 123986161 123986302 -126701552 + MIR SINE MIR 3 143 -119 1950 144 153 20 chr2 123986512 123986916 -126700938 + LTR24 LTR ERV1 10 467 0 371 351 23 23 chr2 123986961 123987135 -126700719 + MIR3 SINE MIR 19 192 -16 537 309 42 16 chr2 123987160 123987351 -126700503 + L3 LINE CR1 1244 1439 -138 273 282 39 26 chr2 123987594 123987750 -126700104 + L1ME4a LINE L1 5748 5905 -216 2102 117 3 7 chr2 123987762 123988061 -126699793 - AluSp SINE Alu -15 298 1 234 303 11 11 chr2 123989476 123989565 -126698289 + MLT1F1 LTR MaLR 37 125 -442 2855 198 12 2 chr2 123989566 123990136 -126697718 + L1MC3 LINE L1 7189 7764 -21 1021 263 101 108 chr2 123990138 123991332 -126696522 - L2 LINE L2 -157 3156 1990 41678 54 12 1 chr2 123991351 123997422 -126690432 + L1PA5 LINE L1 11 6149 -5 2003 100 11 0 chr2 123997423 123997752 -126690102 + AluY SINE Alu 2 333 0 234 296 34 11 chr2 123997753 123997841 -126690013 + MIR SINE MIR 154 243 -19 29 28 0 0 chr2 123997897 123997933 -126689921 + AT_rich Low_complexity Low_complexity 1 36 0 2449 309 107 42 chr2 123997936 123999622 -126688232 - L2 LINE L2 -1318 1996 200 1853 131 34 67 chr2 123999968 124000356 -126687498 + THE1C LTR MaLR 1 375 0 1195 221 56 89 chr2 124000360 124000822 -126687032 + MLT1C LTR MaLR 21 467 0 1181 293 215 15 chr2 124001557 124002509 -126685345 - L2 LINE L2 -3 3310 2165 235 146 0 21 chr2 124002746 124002794 -126685060 + (TG)n Simple_repeat Simple_repeat 1 47 0 261 413 12 0 chr2 124003005 124003177 -126684677 - L2 LINE L2 -990 2324 2151 211 275 75 12 chr2 124003622 124003702 -126684152 - L2 LINE L2 -224 3048 2964 21 0 0 0 chr2 124003702 124003723 -126684131 + AT_rich Low_complexity Low_complexity 1 21 0 320 343 60 64 chr2 124003983 124004234 -126683620 - L2 LINE L2 -18 3254 3005 266 282 56 0 chr2 124004732 124004803 -126683051 - L2 LINE L2 -3 3269 3195 320 277 31 69 chr2 124005021 124005180 -126682674 - L2 LINE L2 -5 3308 3156 180 0 0 0 chr2 124005216 124005236 -126682618 + (CTG)n Simple_repeat Simple_repeat 1 20 0 560 287 44 6 chr2 124005384 124005565 -126682289 + MIR SINE MIR 28 215 -47 216 204 0 0 chr2 124006288 124006332 -126681522 + T-rich Low_complexity Low_complexity 1 44 0 2372 231 20 53 chr2 124007391 124008345 -126679509 - L1 LINE L1 -2596 3550 2629 901 176 37 5 chr2 124008364 124008552 -126679302 + L1 LINE L1 3565 3758 -2388 5027 174 30 3 chr2 124008552 124009756 -126678098 + L1PA16 LINE L1 4919 6150 -16 920 256 96 8 chr2 124009802 124010189 -126677665 - L1M4 LINE L1 -2572 4072 3652 545 337 98 24 chr2 124010242 124010785 -126677069 - L1M4 LINE L1 -5959 583 1 3688 154 29 47 chr2 124010920 124011704 -126676150 - LTR1 LTR ERV1 0 785 16 269 319 7 21 chr2 124012403 124012547 -126675307 + L1ME LINE L1 5559 5700 -464 234 250 113 12 chr2 124012795 124012875 -126674979 - L1M4 LINE L1 -6064 478 391 188 389 22 29 chr2 124013215 124013354 -126674500 - MIR3 SINE MIR -2 206 69 263 315 16 9 chr2 124014445 124014579 -126673275 - L1ME LINE L1 -470 5700 5559 277 338 46 20 chr2 124015461 124015612 -126672242 - MER91A DNA MER1_type -16 180 26 478 291 77 53 chr2 124015743 124016042 -126671812 - L1ME4a LINE L1 -164 5957 5652 232 304 192 0 chr2 124016820 124016945 -126670909 + MIR SINE MIR 50 198 -64 1917 139 18 7 chr2 124018774 124019094 -126668760 + AluSq SINE Alu 1 323 0 695 215 40 53 chr2 124019099 124019318 -126668536 + L1MB5 LINE L1 22 239 -6303 1322 221 35 67 chr2 124019318 124019721 -126668133 + MLT1B LTR MaLR 1 390 0 695 215 40 53 chr2 124019721 124019748 -126668106 + L1MB5 LINE L1 239 265 -6277 * 3046 255 54 10 chr2 124019746 124021017 -126666837 + L1MB5 LINE L1 732 2110 -4536 4395 258 46 61 chr2 124021087 124023514 -126664340 + L1MB5 LINE L1 2278 4666 -1978 575 194 28 0 chr2 124023526 124023634 -126664220 + G-rich Low_complexity Low_complexity 5 115 0 786 68 92 0 chr2 124023634 124023797 -126664057 + GA-rich Low_complexity Low_complexity 3 180 0 400 132 50 60 chr2 124023818 124024000 -126663854 + GA-rich Low_complexity Low_complexity 1 180 0 737 157 10 28 chr2 124024143 124024421 -126663433 + GA-rich Low_complexity Low_complexity 1 273 0 512 263 74 21 chr2 124024445 124024688 -126663166 + L1MB5 LINE L1 4644 4899 -1745 * 3208 245 34 9 chr2 124024686 124024841 -126663013 + L1MB5 LINE L1 5392 5542 -1130 3143 75 7 0 chr2 124024841 124025257 -126662597 + L1PA6 LINE L1 5733 6151 -3 3208 245 34 9 chr2 124025257 124026318 -126661536 + L1MB5 LINE L1 5542 6637 -35 490 256 188 9 chr2 124026719 124026942 -126660912 - LTR37A LTR ERV1 -163 263 1 2165 127 69 0 chr2 124027682 124028028 -126659826 - THE1C LTR MaLR 0 375 6 184 328 49 64 chr2 124028051 124028457 -126659397 - L2 LINE L2 -2415 899 500 3544 241 38 55 chr2 124028589 124029729 -126658125 + MLT1B-int LTR MaLR 1 1120 -251 1903 163 7 85 chr2 124029729 124029904 -126657950 + MLT1B LTR MaLR 1 188 -202 2021 135 7 0 chr2 124029904 124030201 -126657653 + AluSc SINE Alu 1 299 -10 1903 163 7 85 chr2 124030201 124030448 -126657406 + MLT1B LTR MaLR 188 390 0 1121 186 59 8 chr2 124030448 124030684 -126657170 + MLT1B-int LTR MaLR 1484 1731 -4 2018 186 35 0 chr2 124030688 124031065 -126656789 + MLT1B LTR MaLR 1 390 0 1519 197 25 3 chr2 124031065 124031380 -126656474 + L1MB7 LINE L1 5847 6168 -16 1581 128 45 8 chr2 124032767 124033010 -126654844 + AluSx SINE Alu 61 312 0 1809 156 0 24 chr2 124034253 124034596 -126653258 - AluSx SINE Alu 0 336 1 1561 186 16 23 chr2 124034997 124035303 -126652551 + AluSx SINE Alu 1 304 -8 2599 222 57 80 chr2 124035628 124036458 -126651396 - MER21B LTR ERV1 -52 811 1 305 177 81 0 chr2 124036878 124036940 -126650914 - L2 LINE L2 -18 3295 3229 198 377 0 0 chr2 124037082 124037143 -126650711 + L2 LINE L2 3203 3263 -9 431 302 44 62 chr2 124037367 124037592 -126650262 + MIR SINE MIR 36 256 -6 970 154 6 0 chr2 124038609 124038778 -126649076 + L1MA6 LINE L1 6127 6296 -4 1841 228 110 9 chr2 124039732 124040315 -126647539 - LTR48B LTR ERV1 0 644 3 375 357 32 38 chr2 124040381 124040566 -126647288 + MIR SINE MIR 35 218 -44 474 49 0 0 chr2 124041336 124041397 -126646457 + (GA)n Simple_repeat Simple_repeat 2 62 0 270 56 0 0 chr2 124041961 124041997 -126645857 + (TG)n Simple_repeat Simple_repeat 2 37 0 372 187 4 41 chr2 124042577 124042688 -126645166 + LTR24B LTR ERV1 1 104 -361 467 305 66 44 chr2 124042754 124043072 -126644782 + LTR24B LTR ERV1 245 569 -7 3186 160 18 6 chr2 124043073 124043623 -126644231 - MER34C LTR ERV1 -25 560 4 2172 99 0 7 chr2 124043955 124044262 -126643592 + AluSq SINE Alu 5 309 0 183 80 0 0 chr2 124044706 124044731 -126643123 + (T)n Simple_repeat Simple_repeat 1 25 0 204 385 68 14 chr2 124045510 124045658 -126642196 + L2 LINE L2 3115 3270 -2 2086 139 3 0 chr2 124046091 124046401 -126641453 - AluSq SINE Alu -2 311 1 241 338 71 45 chr2 124047219 124047373 -126640481 + MIR3 SINE MIR 30 187 -21 2018 118 4 7 chr2 124047527 124047836 -126640018 + AluSx SINE Alu 3 310 0 195 259 52 0 chr2 124049184 124049242 -126638612 - L2 LINE L2 -66 3247 3187 1829 141 95 6 chr2 124049292 124049618 -126638236 + THE1A LTR MaLR 1 355 0 192 152 0 0 chr2 124049629 124049662 -126638192 + (CA)n Simple_repeat Simple_repeat 2 34 0 398 331 119 37 chr2 124049727 124050080 -126637774 - LTR67 LTR ERVL -25 532 151 198 370 65 0 chr2 124050168 124050276 -126637578 + L2 LINE L2 3141 3255 -17 255 319 0 0 chr2 124051186 124051255 -126636599 + (CA)n Simple_repeat Simple_repeat 1 69 0 226 306 68 53 chr2 124051285 124051491 -126636363 - MIR SINE MIR 0 262 54 20359 161 26 29 chr2 124051495 124055292 -126632562 + L1M1 LINE L1 13 3811 -3754 5392 244 75 49 chr2 124055293 124059008 -126628846 - L1 LINE L1 -1795 4587 776 737 169 79 28 chr2 124059386 124059564 -126628290 - MLT1B LTR MaLR -203 187 1 26 0 0 0 chr2 124059603 124059629 -126628225 + AT_rich Low_complexity Low_complexity 1 26 0 293 296 25 12 chr2 124059637 124059799 -126628055 - L1MDa LINE L1 -4585 1544 1381 388 283 51 79 chr2 124059919 124060272 -126627582 - L1MDa LINE L1 -4881 1238 896 1381 132 27 11 chr2 124060343 124060770 -126627084 + MER75 DNA T2_type 1 514 0 379 285 7 7 chr2 124060770 124060907 -126626947 - L1MDa LINE L1 -5285 834 698 2228 102 0 10 chr2 124061207 124061520 -126626334 - AluSg SINE Alu 0 310 1 2848 13 0 0 chr2 124061748 124062059 -126625795 - AluYa5 SINE Alu 0 311 1 768 316 69 65 chr2 124062475 124063041 -126624813 - L1MDa LINE L1 -860 2041 1439 311 263 63 21 chr2 124063377 124063472 -126624382 + L2 LINE L2 3172 3270 -2 303 140 0 0 chr2 124064068 124064118 -126623736 + (T)n Simple_repeat Simple_repeat 1 50 0 307 281 111 7 chr2 124064335 124064470 -126623384 - L1ME3A LINE L1 -17 6153 6005 811 286 5 24 chr2 124064520 124064733 -126623121 + MER58A DNA MER1_type 1 209 -15 693 276 90 40 chr2 124064751 124065258 -126622596 - L1ME3A LINE L1 -368 5794 5277 342 265 51 0 chr2 124065401 124065518 -126622336 - L1ME3A LINE L1 -1404 4742 4620 224 371 7 53 chr2 124065838 124065989 -126621865 - MER5B DNA MER1_type -34 144 1 213 335 138 43 chr2 124066482 124066670 -126621184 - MIR SINE MIR -6 256 51 2775 225 51 24 chr2 124067110 124067892 -126619962 - MER97a DNA MER1_type? -68 826 24 497 295 18 82 chr2 124068396 124068605 -126619249 + MIR SINE MIR 16 212 -50 211 327 19 39 chr2 124068781 124068885 -126618969 + MIR SINE MIR 30 131 -77 335 213 0 130 chr2 124069434 124069542 -126618312 - L2 LINE L2 0 3313 3220 1057 308 109 27 chr2 124070063 124070732 -126617122 - L2 LINE L2 -202 3111 2391 1890 92 0 4 chr2 124072235 124072485 -126615369 + AluSc SINE Alu 31 279 -30 252 0 0 0 chr2 124072495 124072523 -126615331 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 23 33 0 0 chr2 124073548 124073578 -126614276 + AT_rich Low_complexity Low_complexity 1 30 0 241 296 34 34 chr2 124074531 124074619 -126613235 - MIR SINE MIR -81 127 40 26 30 0 0 chr2 124074836 124074869 -126612985 + AT_rich Low_complexity Low_complexity 1 33 0 34 0 0 0 chr2 124076087 124076121 -126611733 + AT_rich Low_complexity Low_complexity 1 34 0 188 342 50 37 chr2 124076841 124077002 -126610852 - MIR SINE MIR -98 164 2 1107 241 24 9 chr2 124077278 124077614 -126610240 + L1M4 LINE L1 3208 3548 -2598 259 227 15 0 chr2 124077622 124077688 -126610166 + MLT1C-int LTR MaLR 815 881 -490 1246 269 19 39 chr2 124077855 124078304 -126609550 + MLT1C-int LTR MaLR 953 1734 -1 1285 197 31 55 chr2 124078305 124078715 -126609139 + MLT1C LTR MaLR 1 390 0 301 204 0 111 chr2 124078734 124078842 -126609012 + L1MEc LINE L1 2343 2438 -3958 340 268 58 14 chr2 124078993 124079131 -126608723 - MER5A DNA MER1_type -5 184 41 252 0 0 0 chr2 124079335 124079363 -126608491 + (T)n Simple_repeat Simple_repeat 1 28 0 440 344 39 9 chr2 124080384 124080614 -126607240 - MIR SINE MIR -23 239 3 185 371 48 0 chr2 124082065 124082127 -126605727 - L2 LINE L2 -4 3268 3204 822 285 128 28 chr2 124082131 124082721 -126605133 - L2 LINE L2 -4 3309 2662 576 306 87 106 chr2 124082843 124083966 -126603888 + L2 LINE L2 1820 2921 -393 21 57 0 0 chr2 124084398 124084433 -126603421 + AT_rich Low_complexity Low_complexity 1 35 0 2132 126 0 0 chr2 124084520 124084814 -126603040 - AluSg SINE Alu -16 294 1 1080 66 0 18 chr2 124085985 124086151 -126601703 + (TTC)n Simple_repeat Simple_repeat 2 164 0 655 110 0 19 chr2 124086560 124086679 -126601175 + L1MA3 LINE L1 5786 5897 -259 25 0 0 0 chr2 124086703 124086728 -126601126 + AT_rich Low_complexity Low_complexity 1 25 0 204 40 0 0 chr2 124086753 124086778 -126601076 + (TG)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr2 124087029 124087050 -126600804 + AT_rich Low_complexity Low_complexity 1 21 0 6046 47 0 3 chr2 124087261 124088006 -126599848 - L1PA5 LINE L1 0 6154 5412 1693 217 47 55 chr2 124088835 124089342 -126598512 - MLT1D LTR MaLR -2 503 1 335 309 102 11 chr2 124089443 124089815 -126598039 + L1MEc LINE L1 3149 3554 -2661 318 278 10 0 chr2 124089836 124089933 -126597921 + L1MEc LINE L1 3703 3800 -2415 219 238 0 0 chr2 124090121 124090184 -126597670 + (TA)n Simple_repeat Simple_repeat 1 63 0 3896 105 4 0 chr2 124090276 124090828 -126597026 + MER41A LTR ERV1 1 554 0 564 146 0 0 chr2 124091061 124091157 -126596697 + MER41B LTR ERV1 540 635 0 2452 59 3 3 chr2 124091379 124091682 -126596172 - AluY SINE Alu -8 303 1 22 56 0 0 chr2 124092145 124092181 -126595673 + AT_rich Low_complexity Low_complexity 1 36 0 1863 168 0 0 chr2 124092184 124092492 -126595362 + AluSx SINE Alu 1 308 0 219 114 0 0 chr2 124093486 124093521 -126594333 + (TC)n Simple_repeat Simple_repeat 2 36 0 234 0 0 0 chr2 124093553 124093579 -126594275 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 218 294 59 0 chr2 124094440 124094508 -126593346 + L2 LINE L2 3241 3312 -1 192 363 97 0 chr2 124095270 124095383 -126592471 + MIR SINE MIR 81 204 -58 2368 107 0 0 chr2 124095637 124095946 -126591908 + AluSq SINE Alu 1 309 -4 1331 254 31 0 chr2 124096077 124096396 -126591458 + MLT1A1 LTR MaLR 1 329 -36 348 288 25 55 chr2 124097667 124097830 -126590024 + MIR SINE MIR 99 256 -6 2173 49 0 4 chr2 124098233 124098497 -126589357 - AluY SINE Alu -6 305 43 352 225 34 0 chr2 124098560 124098649 -126589205 - MLT1I LTR MaLR -17 392 301 1580 260 70 21 chr2 124098770 124099385 -126588469 - L1ME2 LINE L1 -10 6652 6008 3935 254 61 64 chr2 124099402 124101446 -126586408 - L1ME2 LINE L1 -941 5703 3664 759 212 10 21 chr2 124101446 124101639 -126586215 - L1PB4 LINE L1 -7 6149 5959 3935 254 61 64 chr2 124101639 124101906 -126585948 - L1ME2 LINE L1 -2980 3664 3398 330 242 44 0 chr2 124102051 124102142 -126585712 - L1ME2 LINE L1 -5723 923 829 266 289 35 14 chr2 124102556 124102698 -126585156 - L1ME2 LINE L1 -6383 159 15 469 308 64 8 chr2 124102736 124103093 -126584761 - L1MCa LINE L1 -5117 1309 933 477 357 60 20 chr2 124103432 124103684 -126584170 + MIR SINE MIR 1 262 0 201 167 0 117 chr2 124103697 124103757 -126584097 + MIR SINE MIR 105 157 -105 1901 179 0 0 chr2 124105162 124105459 -126582395 - AluJo SINE Alu -15 297 1 1015 194 223 52 chr2 124105559 124105904 -126581950 + MSTB LTR MaLR 5 408 -20 29 60 0 0 chr2 124105925 124105975 -126581879 + AT_rich Low_complexity Low_complexity 1 50 0 1855 117 62 0 chr2 124106602 124106876 -126580978 + AluSc SINE Alu 1 291 -18 440 217 56 49 chr2 124107125 124107268 -126580586 + LTR8 LTR ERV1 1 144 -547 394 262 146 31 chr2 124107515 124107843 -126580011 + LTR26 LTR ERV1 366 592 -11 31 0 0 0 chr2 124108677 124108708 -126579146 + AT_rich Low_complexity Low_complexity 1 31 0 429 332 37 32 chr2 124109147 124109364 -126578490 - MIR SINE MIR -41 221 4 373 299 30 8 chr2 124110090 124110224 -126577630 - MIR SINE MIR -10 252 116 545 274 98 43 chr2 124111536 124111791 -126576063 - L2 LINE L2 -3 3310 3042 198 242 113 32 chr2 124112027 124112151 -126575703 - MIR3 SINE MIR -68 140 7 29 0 0 0 chr2 124113337 124113366 -126574488 + AT_rich Low_complexity Low_complexity 1 29 0 201 148 66 0 chr2 124113531 124113592 -126574262 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 409 326 38 33 chr2 124114510 124114694 -126573160 + MIR SINE MIR 56 240 -22 189 257 29 57 chr2 124115052 124115122 -126572732 - L3 LINE CR1 -1126 451 384 678 25 0 0 chr2 124115324 124115404 -126572450 + (CTG)n Simple_repeat Simple_repeat 1 80 0 206 0 0 65 chr2 124116230 124116261 -126571593 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 211 237 0 0 chr2 124116571 124116609 -126571245 + L2 LINE L2 3008 3045 -268 1702 207 13 3 chr2 124116711 124117020 -126570834 - AluJb SINE Alu 0 312 1 241 321 12 0 chr2 124118338 124118419 -126569435 + MER94 DNA DNA 39 120 -14 192 314 68 25 chr2 124119189 124119307 -126568547 - MIR3 SINE MIR -78 130 8 5206 19 3 16 chr2 124120082 124120709 -126567145 + L1PA2 LINE L1 5537 6155 0 281 351 93 49 chr2 124120798 124121023 -126566831 - MIR SINE MIR -15 247 13 180 333 107 47 chr2 124121156 124121306 -126566548 - MIR3 SINE MIR -34 174 16 193 196 39 20 chr2 124121666 124121717 -126566137 - L2 LINE L2 0 3313 3262 2288 110 3 0 chr2 124121780 124122089 -126565765 - AluY SINE Alu -1 310 1 1273 185 108 70 chr2 124122469 124122885 -126564969 + MSTB1 LTR MaLR 1 432 0 392 321 0 9 chr2 124123609 124123715 -126564139 + MER5B DNA MER1_type 1 105 -73 2265 71 0 3 chr2 124123753 124124060 -126563794 - AluY SINE Alu 0 306 1 1746 150 41 7 chr2 124124603 124124896 -126562958 + AluSx SINE Alu 1 303 -9 184 216 0 0 chr2 124125199 124125236 -126562618 - MIR SINE MIR -6 256 220 523 205 60 0 chr2 124126061 124126212 -126561642 + MER53 DNA DNA 23 182 -7 266 285 77 46 chr2 124126603 124126733 -126561121 + MIR SINE MIR 112 245 -17 1350 116 70 5 chr2 124127920 124128135 -126559719 - MER30 DNA MER1_type -1 229 1 2187 126 30 0 chr2 124128230 124128531 -126559323 + AluSg SINE Alu 1 310 0 1155 249 73 11 chr2 124129369 124129739 -126558115 - MER63B DNA MER1_type -37 399 7 233 204 52 76 chr2 124129794 124129941 -126557913 - MLT1G LTR MaLR 0 590 416 920 251 62 14 chr2 124129995 124130321 -126557533 - MLT1G LTR MaLR -294 296 1 232 178 0 56 chr2 124130711 124130801 -126557053 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 277 24 48 0 chr2 124130802 124130844 -126557010 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 302 261 0 0 chr2 124130845 124130914 -126556940 - Tigger5 DNA MER2_type -6 2317 2249 656 238 138 0 chr2 124130919 124131108 -126556746 - Tigger5 DNA MER2_type -2108 215 1 2547 45 6 10 chr2 124131576 124131888 -126555966 + AluY SINE Alu 1 311 0 289 321 12 0 chr2 124131910 124131994 -126555860 - L2 LINE L2 -8 3264 3180 504 204 0 0 chr2 124132285 124132388 -126555466 - AluJb SINE Alu -1 311 209 291 335 45 34 chr2 124132394 124132570 -126555284 + MER5B DNA MER1_type 1 178 0 2453 113 6 3 chr2 124132652 124133006 -126554848 - THE1A LTR MaLR 0 355 1 339 235 59 118 chr2 124133065 124133252 -126554602 - MER5B DNA MER1_type -2 176 1 372 264 66 53 chr2 124133407 124133634 -126554220 - Charlie8 DNA MER1_type -2184 233 4 375 142 0 133 chr2 124134882 124135002 -126552852 + MSTD LTR MaLR 262 396 0 3575 173 66 14 chr2 124135002 124135840 -126552014 - L1 LINE L1 -782 5364 4484 536 232 22 33 chr2 124135864 124135917 -126551937 - MER63 DNA MER1_type -135 927 875 2471 103 14 0 chr2 124135917 124136265 -126551589 - THE1A LTR MaLR 0 355 3 10790 115 17 0 chr2 124136268 124137819 -126550035 - THE1A-int LTR MaLR -1 1579 3 536 232 22 33 chr2 124137819 124137942 -126549912 - MER63 DNA MER1_type -189 873 749 2305 124 8 8 chr2 124137964 124138319 -126549535 - THE1A LTR MaLR 0 355 1 305 203 16 0 chr2 124138319 124138383 -126549471 + L1M3 LINE L1 5646 5710 -624 10287 228 20 18 chr2 124188401 124191219 -126496635 + L1PA13 LINE L1 1878 4683 -2166 1973 188 32 34 chr2 124191219 124191768 -126496086 - MLT2A2 LTR ERVL 0 554 1 2187 182 7 2 chr2 124191772 124192184 -126495670 + L1PA13 LINE L1 4684 5097 -1752 4537 175 17 4 chr2 124192320 124193583 -126494271 + L1PA13 LINE L1 5103 6376 -490 292 135 0 19 chr2 124193593 124193645 -126494209 - L1P LINE L1 -2115 4031 3981 795 114 0 8 chr2 124193649 124193772 -126494082 + MLT2A2 LTR ERVL 1 122 -331 1013 145 0 0 chr2 124193774 124193933 -126493921 + L1PA13 LINE L1 6386 6544 -322 3550 137 27 6 chr2 124193933 124194547 -126493307 + L1PA14 LINE L1 5527 6161 0 863 149 14 0 chr2 124194548 124194689 -126493165 - MLT1E3 LTR MaLR -481 143 1 191 422 0 0 chr2 124194811 124194901 -126492953 - L2 LINE L2 -6 3266 3177 413 110 14 0 chr2 124195002 124195075 -126492779 + (TA)n Simple_repeat Simple_repeat 1 74 0 471 294 157 5 chr2 124197274 124197471 -126490383 + LTR16C LTR ERVL 1 227 -264 3250 150 35 3 chr2 124197812 124198419 -126489435 + L1PBa LINE L1 1723 2348 -4515 * 5800 212 32 23 chr2 124198415 124199898 -126487956 + L1 LINE L1 3005 4501 -2361 408 247 11 0 chr2 124200787 124200876 -126486978 - MER21B LTR ERV1 -773 90 1 242 246 0 14 chr2 124201018 124201087 -126486767 + L1M4 LINE L1 2764 2831 -3315 245 224 24 24 chr2 124201150 124201235 -126486619 + L1M4 LINE L1 3345 3429 -2717 3779 158 110 45 chr2 124201853 124202661 -126485193 + MER4D LTR ERV1 10 870 -2 566 202 0 25 chr2 124203082 124203201 -126484653 - MER21B LTR ERV1 -554 309 194 303 201 114 0 chr2 124203319 124203404 -126484450 + L1ME LINE L1 5693 5766 -355 553 66 99 0 chr2 124203404 124203495 -126484359 + L1MB4 LINE L1 6079 6178 -2 303 201 114 0 chr2 124203495 124203572 -126484282 + L1ME LINE L1 5766 5857 -264 1404 178 28 12 chr2 124203807 124204060 -126483794 + AluJb SINE Alu 22 278 -34 208 320 137 26 chr2 124204396 124204549 -126483305 + L2 LINE L2 3130 3299 -14 442 330 139 35 chr2 124204801 124205234 -126482620 - L3 LINE CR1 -138 1439 962 374 96 0 0 chr2 124206276 124206328 -126481526 - MADE1 DNA Mariner -1 79 28 358 82 0 0 chr2 124206342 124206391 -126481463 + MADE1 DNA Mariner 31 79 -1 297 51 0 0 chr2 124206537 124206576 -126481278 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 2562 152 68 34 chr2 124206925 124207451 -126480403 - MER34B LTR ERV1 -18 547 4 266 262 35 121 chr2 124207839 124207980 -126479874 - L2 LINE L2 -1 3312 3184 207 100 0 0 chr2 124208408 124208438 -126479416 + (TC)n Simple_repeat Simple_repeat 1 30 0 3493 143 26 2 chr2 124209356 124210014 -126477840 + MER50 LTR ERV1 9 714 -20 4159 144 33 32 chr2 124210048 124210826 -126477028 + MER4E LTR ERV1 1 779 0 210 281 18 18 chr2 124211077 124211134 -126476720 - MIR SINE MIR -115 93 37 848 232 113 81 chr2 124211989 124212687 -126475167 + MER21B LTR ERV1 17 779 -84 244 260 80 20 chr2 124212694 124212794 -126475060 + MIR SINE MIR 107 212 -50 198 0 0 0 chr2 124214060 124214082 -126473772 + (T)n Simple_repeat Simple_repeat 1 22 0 344 308 75 0 chr2 124215016 124215136 -126472718 + MIR3 SINE MIR 37 165 -43 325 365 22 7 chr2 124215229 124215366 -126472488 + MIR SINE MIR 90 228 -34 263 213 13 0 chr2 124215812 124215887 -126471967 + (TATG)n Simple_repeat Simple_repeat 3 78 0 2109 132 7 0 chr2 124215979 124216275 -126471579 - AluSx SINE Alu -14 298 1 23 54 0 0 chr2 124216326 124216363 -126471491 + AT_rich Low_complexity Low_complexity 1 37 0 35 71 0 0 chr2 124217345 124217415 -126470439 + AT_rich Low_complexity Low_complexity 1 70 0 898 312 84 29 chr2 124218585 124219062 -126468792 + LTR33 LTR ERVL 19 521 0 2029 117 0 23 chr2 124220225 124220524 -126467330 - AluSq SINE Alu -21 292 1 32 26 0 0 chr2 124224127 124224166 -126463688 + AT_rich Low_complexity Low_complexity 1 39 0 69 81 0 0 chr2 124224218 124224378 -126463476 + AT_rich Low_complexity Low_complexity 1 160 0 995 92 31 28 chr2 124225153 124225462 -126462392 + (TCTA)n Simple_repeat Simple_repeat 1 492 0 215 303 13 26 chr2 124225563 124225639 -126462215 - L2 LINE L2 -195 3077 3003 297 298 49 36 chr2 124226605 124226812 -126461042 - L1ME LINE L1 -333 5829 5618 23 0 0 0 chr2 124227547 124227570 -126460284 + AT_rich Low_complexity Low_complexity 1 23 0 1285 95 42 0 chr2 124227641 124227830 -126460024 + MER107 DNA MER1_type 1 197 0 1066 186 70 0 chr2 124228156 124228355 -126459499 - MER20 DNA MER1_type -5 214 2 2244 178 68 2 chr2 124228407 124228845 -126459009 - LTR24 LTR ERV1 0 467 1 479 317 113 9 chr2 124229488 124229709 -126458145 + L2 LINE L2 2090 2333 -981 189 0 0 0 chr2 124229769 124229790 -126458064 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 198 0 0 0 chr2 124229789 124229811 -126458043 + (CA)n Simple_repeat Simple_repeat 1 22 0 253 146 146 0 chr2 124230384 124230439 -126457415 + MLT1A2 LTR MaLR 310 372 -2 2049 152 0 0 chr2 124231620 124231930 -126455924 - AluSx SINE Alu 0 312 3 862 272 83 43 chr2 124232332 124232707 -126455147 - MLT1B LTR MaLR 0 390 1 252 86 0 0 chr2 124233544 124233579 -126454275 + (T)n Simple_repeat Simple_repeat 1 35 0 3986 184 17 26 chr2 124234069 124234198 -126453656 - L1MB1 LINE L1 0 6168 6039 2122 128 72 17 chr2 124234198 124234543 -126453311 + THE1B LTR MaLR 1 364 0 3986 184 17 26 chr2 124234543 124235255 -126452599 - L1MB1 LINE L1 -129 6039 5335 805 168 0 109 chr2 124235288 124235301 -126452553 + AluJo SINE Alu 120 133 -179 234 0 0 0 chr2 124235301 124235327 -126452527 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 805 168 0 109 chr2 124235327 124235515 -126452339 + AluJo SINE Alu 133 299 -13 24 67 0 0 chr2 124235516 124235561 -126452293 + AT_rich Low_complexity Low_complexity 1 45 0 2615 274 58 54 chr2 124235561 124237690 -126450164 - L1M1 LINE L1 -4298 1672 3 219 69 0 0 chr2 124237746 124237775 -126450079 + (A)n Simple_repeat Simple_repeat 1 29 0 283 148 0 56 chr2 124237776 124237830 -126450024 + L1M3d LINE L1 3 53 -5838 * 1241 288 71 16 chr2 124237813 124238418 -126449436 - L1M3c LINE L1 -4605 1536 899 485 348 48 60 chr2 124238535 124238954 -126448900 - L1M3c LINE L1 -5477 654 241 4422 200 60 13 chr2 124239280 124241141 -126446713 + L1PA16 LINE L1 4208 6158 -8 1567 276 30 34 chr2 124241919 124242484 -126445370 - MER92B LTR ERV1 -73 563 1 2038 202 5 14 chr2 124242489 124242924 -126444930 - L1 LINE L1 -1053 5093 4663 1732 157 7 102 chr2 124242914 124243251 -126444603 + L1MB3 LINE L1 5141 5415 -768 * 1736 155 163 19 chr2 124243251 124243625 -126444229 + MSTA LTR MaLR 1 428 0 1732 157 7 102 chr2 124243625 124243835 -126444019 + L1MB3 LINE L1 5415 5643 -540 2213 177 91 6 chr2 124244104 124244579 -126443275 + L1MB3 LINE L1 5660 6174 -9 415 338 129 12 chr2 124244591 124244925 -126442929 + L1M4 LINE L1 3198 3570 -2576 27790 130 21 17 chr2 124245203 124251651 -126436203 + L1PA8 LINE L1 5 6487 0 22 70 0 0 chr2 124252228 124252271 -126435583 + AT_rich Low_complexity Low_complexity 1 43 0 426 255 55 99 chr2 124253436 124253840 -126434014 + L1MEd LINE L1 819 1204 -4915 275 279 66 40 chr2 124253937 124254163 -126433691 + HAL1 LINE L1 1437 1668 -839 21 89 0 0 chr2 124254221 124254277 -126433577 + AT_rich Low_complexity Low_complexity 1 56 0 306 251 194 40 chr2 124254412 124254639 -126433215 - MIR SINE MIR 0 262 1 22 35 0 0 chr2 124255055 124255084 -126432770 + AT_rich Low_complexity Low_complexity 1 29 0 7030 51 18 0 chr2 124255084 124256287 -126431567 - L1PA5 LINE L1 -3 6151 4938 6631 23 0 0 chr2 124256287 124257066 -126430788 + L1PA5 LINE L1 4178 4956 -1190 2668 20 0 0 chr2 124257066 124257372 -126430482 + L1P LINE L1 3876 4181 -1965 2198 250 2 9 chr2 124257372 124257929 -126429925 - L1 LINE L1 -3380 2766 2214 4354 170 20 2 chr2 124257939 124258785 -126429069 + L1MA5 LINE L1 5435 6295 -5 25 51 0 0 chr2 124258823 124258862 -126428992 + AT_rich Low_complexity Low_complexity 1 39 0 376 155 82 10 chr2 124258867 124258964 -126428890 + L1MA10 LINE L1 6228 6331 -3 24 53 0 0 chr2 124259270 124259308 -126428546 + AT_rich Low_complexity Low_complexity 1 38 0 235 98 0 164 chr2 124260071 124260132 -126427722 + MLT1H LTR MaLR 240 290 -259 281 191 0 131 chr2 124260294 124260378 -126427476 + MLT1H LTR MaLR 475 547 -2 1211 210 42 72 chr2 124260620 124261006 -126426848 + MLT1A2 LTR MaLR 1 374 0 2018 133 51 23 chr2 124261112 124261466 -126426388 + THE1B LTR MaLR 1 364 0 11024 115 6 1 chr2 124261470 124263039 -126424815 + THE1B-int LTR MaLR 5 1580 0 2052 163 8 35 chr2 124263039 124263413 -126424441 + THE1B LTR MaLR 1 364 0 521 304 85 22 chr2 124263480 124263704 -126424150 + LTR16A LTR ERVL 206 443 -7 754 256 55 41 chr2 124264103 124264466 -126423388 - L1ME4a LINE L1 -174 5947 5580 211 245 112 32 chr2 124265623 124265750 -126422104 + MIR SINE MIR 102 248 -14 204 361 0 0 chr2 124267021 124267082 -126420772 + MIR SINE MIR 46 106 -156 2032 199 42 26 chr2 124267121 124267152 -126420702 - MLT2C2 LTR ERVL 0 464 435 654 25 0 0 chr2 124267152 124267232 -126420622 + (TAGA)n Simple_repeat Simple_repeat 2 81 0 2032 199 42 26 chr2 124267232 124267657 -126420197 - MLT2C2 LTR ERVL -29 435 1 297 270 139 11 chr2 124268009 124268147 -126419707 + MIR SINE MIR 19 173 -64 428 313 69 18 chr2 124271177 124271394 -126416460 + MIR SINE MIR 34 261 -1 596 291 23 6 chr2 124272106 124272278 -126415576 + MIR SINE MIR 66 240 -22 1641 149 36 29 chr2 124272408 124272717 -126415137 + Tigger2a DNA MER2_type 1 311 -123 2337 181 6 23 chr2 124273150 124273621 -126414233 - MLT1C LTR MaLR 0 467 5 24 0 0 0 chr2 124273653 124273677 -126414177 + AT_rich Low_complexity Low_complexity 1 24 0 230 294 126 21 chr2 124274843 124274885 -126412969 - MIR SINE MIR -56 206 170 2044 130 14 0 chr2 124274885 124275177 -126412677 + AluSg SINE Alu 1 296 -14 230 294 126 21 chr2 124275177 124275277 -126412577 - MIR SINE MIR -92 170 49 513 288 26 7 chr2 124276256 124276409 -126411445 + MIR SINE MIR 12 167 -95 374 381 82 21 chr2 124276506 124277033 -126410821 + L2 LINE L2 1155 1713 -1601 30 0 0 0 chr2 124277055 124277085 -126410769 + AT_rich Low_complexity Low_complexity 1 30 0 310 313 144 37 chr2 124277976 124278385 -126409469 - L2 LINE L2 -969 2345 1893 181 241 0 56 chr2 124278815 124278869 -126408985 + L2 LINE L2 3257 3307 -6 1195 239 98 34 chr2 124280213 124280652 -126407202 - MLT1C LTR MaLR 0 467 1 396 324 44 20 chr2 124281235 124281578 -126406276 + L1ME4a LINE L1 5509 5859 -262 222 164 55 36 chr2 124281579 124281634 -126406220 - L2 LINE L2 -537 2777 2722 2866 225 87 10 chr2 124281696 124283307 -126404547 + L1PB1 LINE L1 6 1901 -4962 734 230 7 0 chr2 124283416 124283555 -126404299 + MER21B LTR ERV1 458 597 -266 582 210 43 79 chr2 124283566 124283831 -126404023 - MSTD LTR MaLR -7 389 114 1502 127 38 16 chr2 124284616 124284931 -126402923 + L1PB1 LINE L1 1863 2184 -4679 * 8061 247 17 47 chr2 124284918 124286269 -126401585 + L1PB1 LINE L1 2413 3804 -3063 2058 108 45 3 chr2 124286269 124286557 -126401297 + AluSp SINE Alu 1 300 -13 8061 247 17 47 chr2 124286557 124287492 -126400362 + L1PB1 LINE L1 3804 4766 -2101 1084 96 0 7 chr2 124287492 124287638 -126400216 + AluSg/x SINE Alu 164 308 -4 8061 247 17 47 chr2 124287638 124289461 -126398393 + L1PB1 LINE L1 4766 6517 -350 241 107 18 18 chr2 124289478 124289534 -126398320 + (TA)n Simple_repeat Simple_repeat 2 57 0 2165 155 11 5 chr2 124289539 124289914 -126397940 + L1PB1 LINE L1 6491 6867 0 518 239 45 8 chr2 124289954 124290088 -126397766 - LTR16C LTR ERVL -3 488 350 1715 197 100 39 chr2 124290206 124290688 -126397166 - L1ME1 LINE L1 -76 6090 5580 662 341 28 14 chr2 124290691 124290975 -126396879 - LTR16C LTR ERVL -164 327 40 364 323 21 0 chr2 124291206 124291302 -126396552 - MIR SINE MIR -164 98 1 31 58 0 0 chr2 124291566 124291618 -126396236 + AT_rich Low_complexity Low_complexity 1 52 0 400 172 44 74 chr2 124291618 124291754 -126396100 - L1MA7 LINE L1 -10 6302 6167 241 420 53 13 chr2 124293070 124293220 -126394634 - L2 LINE L2 -10 3262 3107 670 257 15 20 chr2 124293575 124293777 -126394077 + MIR SINE MIR 57 257 -5 454 301 79 54 chr2 124293915 124294060 -126393794 - L2 LINE L2 -1 3312 3172 198 0 0 0 chr2 124294060 124294082 -126393772 + (TG)n Simple_repeat Simple_repeat 1 22 0 454 301 79 54 chr2 124294082 124294669 -126393185 - L2 LINE L2 -141 3172 2524 2255 100 0 0 chr2 124294720 124295020 -126392834 - AluSx SINE Alu -12 300 1 1053 184 121 69 chr2 124295986 124296409 -126391445 - LTR56 LTR ERV1 0 445 1 215 329 68 0 chr2 124296527 124296600 -126391254 - MIR SINE MIR -90 118 41 781 200 35 12 chr2 124297308 124297478 -126390376 + MER101B LTR ERV1 3 176 -394 2157 190 60 52 chr2 124297964 124298465 -126389389 + MLT1D LTR MaLR 1 505 0 248 211 19 0 chr2 124299360 124299412 -126388442 + MER3 DNA MER1_type 155 207 -2 245 258 110 93 chr2 124299924 124300106 -126387748 - MIR3 SINE MIR -18 190 6 432 309 44 39 chr2 124300341 124300522 -126387332 - MIR SINE MIR -55 207 26 182 271 71 29 chr2 124300725 124300795 -126387059 + MIR3 SINE MIR 6 78 -130 181 258 113 32 chr2 124300989 124301051 -126386803 - MER5B DNA MER1_type -94 84 18 381 332 67 5 chr2 124301660 124301853 -126386001 + L1ME4a LINE L1 5703 5907 -214 2536 275 79 17 chr2 124301926 124303012 -126384842 + LTR57-int LTR ERVL 25 1196 -4458 459 231 9 19 chr2 124303013 124303121 -126384733 + LTR57-int LTR ERVL 1123 1229 -4535 684 177 16 0 chr2 124303128 124303252 -126384602 + LTR57-int LTR ERVL 3817 3942 -1822 * 1704 212 31 3 chr2 124303244 124303598 -126384256 + LTR57-int LTR ERVL 1229 1592 -4172 908 141 27 0 chr2 124303588 124303737 -126384117 + LTR57-int LTR ERVL 2670 2822 -2942 * 1065 175 19 0 chr2 124303742 124303948 -126383906 - Tigger1 DNA MER2_type -2 2416 2207 791 222 67 6 chr2 124303917 124304097 -126383757 - Tigger1 DNA MER2_type -2227 191 1 * 8701 177 22 37 chr2 124304097 124305744 -126382110 + LTR57-int LTR ERVL 2824 4446 -1318 239 338 0 0 chr2 124305758 124305829 -126382025 - MIR SINE MIR -99 163 93 299 332 67 22 chr2 124306336 124306649 -126381205 - L1 LINE L1 -1812 4334 4008 445 241 37 0 chr2 124306681 124306789 -126381065 + MIR SINE MIR 136 247 -15 326 222 0 0 chr2 124306860 124306923 -126380931 + MIR SINE MIR 189 251 -11 21 57 0 0 chr2 124307274 124307309 -126380545 + AT_rich Low_complexity Low_complexity 1 35 0 471 288 114 79 chr2 124307559 124308201 -126379653 - L1 LINE L1 -2807 3339 2676 395 116 0 0 chr2 124308542 124308611 -126379243 - L1MA10 LINE L1 -1 6333 6265 2660 232 60 14 chr2 124308612 124309372 -126378482 + L1 LINE L1 4150 4944 -1202 510 280 199 34 chr2 124309944 124310472 -126377382 - HAL1b LINE L1 -457 891 277 22 35 0 0 chr2 124310690 124310719 -126377135 + AT_rich Low_complexity Low_complexity 1 29 0 1775 154 7 14 chr2 124310719 124311011 -126376843 - AluSx SINE Alu -22 290 1 661 260 62 0 chr2 124311012 124311158 -126376696 - FRAM SINE Alu -12 164 10 22 0 0 0 chr2 124311495 124311517 -126376337 + AT_rich Low_complexity Low_complexity 1 22 0 3587 150 26 2 chr2 124312317 124312904 -126374950 + LTR26 LTR ERV1 1 601 -2 499 261 143 44 chr2 124313234 124313506 -126374348 + LOR1-int LTR ERV1 416 714 -5549 * 987 266 26 9 chr2 124313482 124313761 -126374093 + LOR1-int LTR ERV1 662 907 -5039 956 176 69 5 chr2 124313827 124314031 -126373823 + LTR57-int LTR ERVL 289 505 -4838 5763 158 64 73 chr2 124314031 124315464 -126372390 + LOR1-int LTR ERV1 786 2231 -4367 2423 66 0 35 chr2 124315464 124315783 -126372071 + AluY SINE Alu 1 308 -3 5763 158 64 73 chr2 124315783 124315930 -126371924 + LOR1-int LTR ERV1 2231 2378 -4220 526 14 55 0 chr2 124315930 124316003 -126371851 + (TTTTA)n Simple_repeat Simple_repeat 4 80 0 5763 158 64 73 chr2 124316003 124316173 -126371681 + LOR1-int LTR ERV1 2378 3730 -2868 1097 166 58 35 chr2 124316245 124316663 -126371191 + LOR1-int LTR ERV1 3734 4183 -2148 1496 137 34 102 chr2 124316836 124317220 -126370634 + LOR1-int LTR ERV1 3763 6154 -604 270 179 0 18 chr2 124317254 124317310 -126370544 + LOR1-int LTR ERV1 6384 6438 -320 1366 184 4 12 chr2 124317327 124317571 -126370283 + LOR1-int LTR ERV1 6852 7093 -1027 874 174 81 0 chr2 124317577 124317726 -126370128 + LTR26 LTR ERV1 443 603 0 203 386 32 13 chr2 124317754 124317912 -126369942 - L2 LINE L2 -222 3091 2931 493 259 46 27 chr2 124318387 124318587 -126369267 - MIR SINE MIR -57 205 2 187 305 203 8 chr2 124319392 124319510 -126368344 - L2 LINE L2 -25 3247 3107 2191 93 0 81 chr2 124320255 124320587 -126367267 + AluSp SINE Alu 1 305 -8 183 80 0 0 chr2 124320651 124320676 -126367178 + (CAA)n Simple_repeat Simple_repeat 3 27 0 785 191 28 98 chr2 124320787 124321002 -126366852 + MER20 DNA MER1_type 19 218 -1 607 158 0 0 chr2 124321177 124321278 -126366576 - FRAM SINE Alu -17 159 59 2150 106 30 16 chr2 124321898 124322201 -126365653 + AluSx SINE Alu 1 307 -5 293 318 54 23 chr2 124322751 124322880 -126364974 - L2 LINE L2 -230 3042 2910 488 270 178 19 chr2 124322885 124323144 -126364710 - L1MC4a LINE L1 -1816 5992 5693 689 317 74 67 chr2 124323250 124324322 -126363532 - L1MC4a LINE L1 -1262 4884 3806 581 300 126 43 chr2 124324373 124325096 -126362758 - L1MC4a LINE L1 -2480 3666 2884 253 385 96 22 chr2 124325323 124325780 -126362074 - L2 LINE L2 -759 2555 2065 2146 123 3 7 chr2 124326667 124326977 -126360877 + AluSc SINE Alu 1 309 0 2218 95 3 0 chr2 124329298 124329594 -126358260 - AluY SINE Alu -13 298 2 242 267 17 0 chr2 124329642 124329702 -126358152 - MIR SINE MIR -19 243 183 207 0 0 0 chr2 124329780 124329803 -126358051 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 30 27 0 0 chr2 124330125 124330162 -126357692 + AT_rich Low_complexity Low_complexity 1 37 0 195 42 0 0 chr2 124330280 124330304 -126357550 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2226 105 3 0 chr2 124330931 124331226 -126356628 + AluSg SINE Alu 1 296 -14 324 250 47 39 chr2 124331543 124331671 -126356183 + MIR3 SINE MIR 74 202 -6 2478 254 60 43 chr2 124332215 124333003 -126354851 - MER21B LTR ERV1 -51 812 12 954 122 0 0 chr2 124333332 124333480 -126354374 + (TCCCC)n Simple_repeat Simple_repeat 4 151 0 530 326 58 30 chr2 124333562 124333890 -126353964 - MLT1I LTR MaLR -3 406 70 194 361 0 36 chr2 124334028 124334111 -126353743 - L2 LINE L2 -6 3266 3187 746 183 0 14 chr2 124334224 124334579 -126353275 + (TG)n Simple_repeat Simple_repeat 1 349 0 222 291 0 18 chr2 124334712 124334767 -126353087 + L2 LINE L2 3194 3247 -66 2409 99 0 0 chr2 124335192 124335505 -126352349 + AluSq SINE Alu 1 313 0 187 338 14 14 chr2 124336036 124336107 -126351747 - L2 LINE L2 -8 3264 3194 338 276 201 39 chr2 124338217 124338496 -126349358 - L2 LINE L2 -683 2631 2308 210 304 51 13 chr2 124339322 124339401 -126348453 - MIR SINE MIR -80 128 47 236 233 100 0 chr2 124340396 124340456 -126347398 + MER97a DNA MER1_type? 98 163 -731 237 33 0 0 chr2 124340511 124340541 -126347313 + (ATTG)n Simple_repeat Simple_repeat 2 31 0 1886 125 35 28 chr2 124340543 124340830 -126347024 - AluSx SINE Alu -22 290 2 525 307 72 68 chr2 124341012 124341485 -126346369 + L2 LINE L2 2828 3302 -11 2150 121 0 3 chr2 124341997 124342294 -126345560 - AluSg SINE Alu -14 296 1 214 27 0 54 chr2 124342421 124342458 -126345396 + (TTA)n Simple_repeat Simple_repeat 1 35 0 358 286 95 16 chr2 124342639 124342765 -126345089 - L2 LINE L2 -1 3271 3136 219 348 93 25 chr2 124343120 124343281 -126344573 + MIR3 SINE MIR 26 197 -11 30 27 0 0 chr2 124343335 124343372 -126344482 + AT_rich Low_complexity Low_complexity 1 37 0 26 82 0 0 chr2 124344404 124344465 -126343389 + AT_rich Low_complexity Low_complexity 1 61 0 264 253 63 42 chr2 124344734 124344829 -126343025 - MIR SINE MIR -75 187 91 1147 191 27 27 chr2 124344836 124345003 -126342851 + L1MA6 LINE L1 6034 6203 -97 2180 169 43 29 chr2 124345003 124345423 -126342431 + MSTB LTR MaLR 1 426 0 1147 191 27 27 chr2 124345423 124345517 -126342337 + L1MA6 LINE L1 6202 6295 -5 21 36 0 0 chr2 124345614 124345642 -126342212 + AT_rich Low_complexity Low_complexity 1 28 0 285 54 54 0 chr2 124346705 124346761 -126341093 + T-rich Low_complexity Low_complexity 2 60 0 1731 160 4 4 chr2 124346763 124347044 -126340810 - AluJb SINE Alu -31 281 1 774 215 43 0 chr2 124347658 124347821 -126340033 + MER47A DNA MER2_type 1 170 -196 467 193 0 0 chr2 124348248 124348331 -126339523 - L1P LINE L1 -6062 84 2 3584 68 45 0 chr2 124348335 124348819 -126339035 + L1PA8 LINE L1 5667 6172 0 653 154 0 0 chr2 124348829 124348933 -126338921 - AluJb SINE Alu -208 104 1 288 310 47 49 chr2 124350726 124351177 -126336677 - L1MC5 LINE L1 -36 7925 7476 385 342 30 30 chr2 124351815 124352052 -126335802 - L2 LINE L2 -479 2835 2599 197 337 20 20 chr2 124352046 124352147 -126335707 - MIR3 SINE MIR -8 200 100 * 27 29 0 0 chr2 124352184 124352218 -126335636 + AT_rich Low_complexity Low_complexity 1 34 0 334 192 26 13 chr2 124352721 124352799 -126335055 + MER116 DNA Mariner 1 79 -1 247 347 48 24 chr2 124353000 124353124 -126334730 + L2 LINE L2 3146 3272 0 574 324 97 0 chr2 124353192 124353399 -126334455 + MIR SINE MIR 26 252 -10 333 0 0 0 chr2 124353449 124353486 -126334368 + (TG)n Simple_repeat Simple_repeat 2 38 0 288 339 71 18 chr2 124354252 124354364 -126333490 + L2 LINE L2 3155 3272 0 35 41 0 0 chr2 124355750 124355799 -126332055 + AT_rich Low_complexity Low_complexity 1 49 0 344 320 47 7 chr2 124356302 124356452 -126331402 - MIR SINE MIR -65 197 42 2190 75 4 0 chr2 124358407 124358712 -126329142 - AluY SINE Alu 0 306 1 231 240 0 0 chr2 124359062 124359112 -126328742 - MER58 DNA MER1_type 0 2420 2371 879 254 108 4 chr2 124359117 124359357 -126328497 - MER58 DNA MER1_type -2155 265 1 2074 87 4 0 chr2 124360163 124360428 -126327426 - AluSg SINE Alu -7 303 38 852 256 76 41 chr2 124361290 124361775 -126326079 + MLT1E2 LTR MaLR 101 505 0 443 268 34 45 chr2 124361806 124361985 -126325869 + LTR16B LTR ERVL 122 298 -166 206 329 79 36 chr2 124362454 124362594 -126325260 - MER5A DNA MER1_type -1 188 43 1118 233 5 72 chr2 124364880 124365253 -126322601 + L1MB7 LINE L1 8 355 -6187 2307 262 49 15 chr2 124365253 124366132 -126321722 + L1MB7 LINE L1 3500 4463 -2181 955 240 31 108 chr2 124366139 124366545 -126321309 + MLT1A2 LTR MaLR 1 467 0 3341 246 45 21 chr2 124366551 124366735 -126321119 + L1MB7 LINE L1 4467 4645 -2037 198 0 0 0 chr2 124366735 124366757 -126321097 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 3341 246 45 21 chr2 124366757 124368665 -126319189 + L1MB7 LINE L1 4645 6662 -20 718 288 22 27 chr2 124368704 124368926 -126318928 - MIR SINE MIR -41 221 1 210 234 21 0 chr2 124368974 124369021 -126318833 + L3b LINE CR1 1526 1573 -10 232 290 135 63 chr2 124369157 124369364 -126318490 + MIR SINE MIR 19 240 -22 206 347 32 24 chr2 124369417 124369541 -126318313 + L2 LINE L2 2029 2153 -1161 1251 323 44 15 chr2 124369662 124370139 -126317715 + L2 LINE L2 2390 2880 -434 568 246 0 8 chr2 124370142 124370272 -126317582 + LTR16C LTR ERVL 350 478 -13 333 313 0 0 chr2 124372329 124372412 -126315442 + HERVL LTR ERVL 4106 4188 -1466 507 320 49 34 chr2 124372686 124373120 -126314734 + LTR16C LTR ERVL 1 488 -3 1377 193 45 19 chr2 124373965 124374276 -126313578 - L1M2 LINE L1 -565 5747 5429 419 289 16 16 chr2 124375622 124375743 -126312111 + L2 LINE L2 3190 3310 -3 600 293 40 18 chr2 124375848 124376070 -126311784 - MIR SINE MIR -10 252 26 28 95 0 0 chr2 124376148 124376232 -126311622 + AT_rich Low_complexity Low_complexity 1 84 0 38 39 0 0 chr2 124376293 124376345 -126311509 + AT_rich Low_complexity Low_complexity 1 52 0 340 376 92 23 chr2 124376357 124376791 -126311063 + L1M4 LINE L1 3689 4152 -1994 21 0 0 0 chr2 124376927 124376948 -126310906 + AT_rich Low_complexity Low_complexity 1 21 0 270 261 78 13 chr2 124377542 124377695 -126310159 + L1MCc LINE L1 1303 1465 -4958 653 304 153 74 chr2 124377697 124378252 -126309602 + L1MCc LINE L1 1663 2302 -4680 1151 125 5 67 chr2 124379357 124379556 -126308298 - Tigger1 DNA MER2_type -6 2412 2227 2006 136 0 0 chr2 124379556 124379843 -126308011 + AluSg SINE Alu 2 288 -22 1151 125 5 67 chr2 124379843 124379867 -126307987 - Tigger1 DNA MER2_type -191 2227 2203 835 176 13 25 chr2 124379857 124380016 -126307838 - Tigger1 DNA MER2_type -2261 157 1 * 4235 98 8 23 chr2 124380747 124381391 -126306463 - MER41B LTR ERV1 0 635 2 943 215 22 153 chr2 124382340 124382792 -126305062 - MSTD LTR MaLR 0 396 4 351 0 0 0 chr2 124383742 124383781 -126304073 + (TG)n Simple_repeat Simple_repeat 2 40 0 25 51 0 0 chr2 124383806 124383845 -126304009 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr2 124384742 124384770 -126303084 + AT_rich Low_complexity Low_complexity 1 28 0 1445 238 62 41 chr2 124385572 124386256 -126301598 + L1ME1 LINE L1 4987 5677 -489 573 222 53 91 chr2 124386256 124386394 -126301460 + L1ME1 LINE L1 5915 6042 -124 1993 100 0 31 chr2 124386394 124386683 -126301171 + AluSx SINE Alu 28 307 -5 573 222 53 91 chr2 124386683 124386787 -126301067 + L1ME1 LINE L1 6042 6148 -18 494 337 89 8 chr2 124387362 124387608 -126300246 + L3 LINE CR1 597 862 -715 183 325 113 41 chr2 124387709 124387903 -126299951 + L3 LINE CR1 858 1065 -512 195 186 0 0 chr2 124387951 124387994 -126299860 + (TG)n Simple_repeat Simple_repeat 2 44 0 23 24 0 24 chr2 124388076 124388105 -126299749 + AT_rich Low_complexity Low_complexity 1 30 -10 2047 135 0 0 chr2 124388105 124388394 -126299460 + AluSq SINE Alu 1 289 -24 23 24 0 24 chr2 124388394 124388405 -126299449 + AT_rich Low_complexity Low_complexity 30 40 0 215 282 12 35 chr2 124388408 124388493 -126299361 - L2 LINE L2 -4 3309 3227 2003 114 0 17 chr2 124389400 124389689 -126298165 - AluSc SINE Alu -15 294 11 2500 122 3 3 chr2 124390683 124391060 -126296794 + L1PA13 LINE L1 5787 6163 0 24 77 0 0 chr2 124392260 124392312 -126295542 + AT_rich Low_complexity Low_complexity 1 52 0 873 220 153 29 chr2 124392496 124392850 -126295004 + MER39 LTR ERV1 250 653 0 227 333 71 104 chr2 124392922 124393231 -126294623 - L2 LINE L2 -47 3225 2927 517 285 65 28 chr2 124394626 124394840 -126293014 - MIR SINE MIR -12 250 29 981 224 20 56 chr2 124395165 124395468 -126292386 - L1MA9 LINE L1 -38 6274 5983 477 165 0 62 chr2 124395481 124395578 -126292276 - L1MA9 LINE L1 -418 5894 5804 231 217 17 0 chr2 124395673 124395733 -126292121 - L1MA9 LINE L1 -561 5773 5713 335 369 112 16 chr2 124396554 124396920 -126290934 + L3 LINE CR1 461 861 -716 231 283 87 0 chr2 124397249 124397341 -126290513 - MER69 DNA AcHobo 0 2526 2427 673 231 105 54 chr2 124397716 124397993 -126289861 + MLT1I LTR MaLR 1 291 -118 875 241 150 23 chr2 124398233 124398668 -126289186 - LTR1B LTR ERV1 -283 502 10 2651 187 42 2 chr2 124398668 124399220 -126288634 - HUERS-P2 LTR ERV1 -13 3075 2467 * 3856 197 22 18 chr2 124399219 124399851 -126288003 - HUERS-P2 LTR ERV1 -1707 1381 744 2046 126 0 26 chr2 124399851 124400160 -126287694 + AluSq SINE Alu 1 301 -12 3856 197 22 18 chr2 124400160 124400290 -126287564 - HUERS-P2 LTR ERV1 -2344 744 616 637 175 7 77 chr2 124400263 124400406 -126287448 - HUERS-P2 LTR ERV1 -2954 134 2 * 238 254 122 63 chr2 124400407 124400612 -126287242 - LTR28 LTR ERV1 0 1020 804 804 258 87 54 chr2 124400634 124401080 -126286774 - LTR1B LTR ERV1 -333 493 33 * 1729 241 90 46 chr2 124401076 124401666 -126286188 - MLT1E3 LTR MaLR -8 616 1 548 206 26 101 chr2 124402589 124402856 -126284998 - L1M4 LINE L1 -2650 3496 3250 5238 128 11 53 chr2 124402860 124403233 -126284621 + MER4D LTR ERV1 7 394 -509 2202 120 0 19 chr2 124403233 124403549 -126284305 - AluSg SINE Alu 0 310 1 5238 128 11 53 chr2 124403549 124404112 -126283742 + MER4D LTR ERV1 394 903 0 1144 226 51 49 chr2 124404116 124404527 -126283327 - MER92A LTR ERV1 0 412 1 2476 256 47 40 chr2 124404534 124405002 -126282852 - L1M4 LINE L1 -2898 3248 2785 2080 179 18 0 chr2 124405002 124405398 -126282456 - MER57A LTR ERV1 0 403 1 2476 256 47 40 chr2 124405398 124405990 -126281864 - L1M4 LINE L1 -3361 2785 2181 1458 246 46 54 chr2 124406022 124406344 -126281510 + MLT1D LTR MaLR 13 331 -174 1152 107 12 0 chr2 124406344 124406512 -126281342 + L1PA6 LINE L1 5982 6151 -3 1458 246 46 54 chr2 124406512 124406686 -126281168 + MLT1D LTR MaLR 331 505 0 244 254 180 8 chr2 124407053 124407175 -126280679 + MIR SINE MIR 118 260 -2 225 247 19 19 chr2 124407788 124407997 -126279857 + (TA)n Simple_repeat Simple_repeat 1 209 0 1885 239 23 45 chr2 124408104 124408635 -126279219 + LTR40a LTR ERVL 1 519 0 2277 108 0 3 chr2 124408939 124409245 -126278609 - AluSg SINE Alu -5 305 1 23 0 0 0 chr2 124409601 124409624 -126278230 + AT_rich Low_complexity Low_complexity 1 23 0 457 223 18 0 chr2 124409670 124409782 -126278072 + L1ME2 LINE L1 6040 6153 -11 1982 111 21 0 chr2 124409944 124410224 -126277630 + AluSq SINE Alu 1 286 -27 257 349 48 20 chr2 124411440 124411586 -126276268 - MER5A DNA MER1_type 0 189 40 329 284 26 17 chr2 124411783 124411899 -126275955 + MIR SINE MIR 109 225 -37 465 307 46 7 chr2 124412691 124412844 -126275010 + MIR SINE MIR 73 231 -31 355 221 0 0 chr2 124413513 124413590 -126274264 + L1ME2 LINE L1 6076 6152 -12 273 270 35 0 chr2 124413651 124413766 -126274088 + (TA)n Simple_repeat Simple_repeat 1 119 0 412 255 19 0 chr2 124413858 124413964 -126273890 + L1M4 LINE L1 3744 3851 -2295 3309 230 50 13 chr2 124414085 124414877 -126272977 - L1MB5 LINE L1 -10 6662 5841 1423 233 42 52 chr2 124415557 124416077 -126271777 - L1MB5 LINE L1 -2499 4145 3631 876 187 6 0 chr2 124416137 124416308 -126271546 - L1MB5 LINE L1 -5029 1617 1446 533 167 9 37 chr2 124416312 124416420 -126271434 - MER31A LTR ERV1 -28 457 353 1075 259 29 41 chr2 124416420 124416906 -126270948 - L1MB5 LINE L1 -5078 1464 985 5531 221 58 21 chr2 124416914 124418220 -126269634 + L1MDa LINE L1 987 2407 -4133 263 71 24 0 chr2 124418220 124418262 -126269592 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 5531 221 58 21 chr2 124418262 124419305 -126268549 + L1MDa LINE L1 2407 3411 -3129 4467 183 56 2 chr2 124419448 124420357 -126267497 + L1MA8 LINE L1 5316 6273 -18 11188 142 23 4 chr2 124420360 124422210 -126265644 - Tigger1 DNA MER2_type -533 1885 1 751 290 11 0 chr2 124423061 124423237 -126264617 - MER45A DNA AcHobo 0 178 1 369 0 0 0 chr2 124423458 124423499 -126264355 + (A)n Simple_repeat Simple_repeat 1 41 0 11183 184 16 24 chr2 124424409 124427415 -126260439 - L1PA13 LINE L1 -2 6161 3159 447 35 0 0 chr2 124427415 124427472 -126260382 + (TG)n Simple_repeat Simple_repeat 2 58 0 11183 184 16 24 chr2 124427472 124427693 -126260161 - L1PA13 LINE L1 -3004 3159 2938 761 199 28 3 chr2 124427704 124427967 -126259887 + L1MB7 LINE L1 5800 6115 -69 309 337 67 56 chr2 124428016 124428286 -126259568 - HAL1 LINE L1 -1409 1098 826 615 325 71 5 chr2 124429354 124429566 -126258288 - MIR SINE MIR -36 226 1 1869 109 53 0 chr2 124431284 124431549 -126256305 + AluSx SINE Alu 33 311 -1 244 387 9 9 chr2 124431922 124432033 -126255821 + L2 LINE L2 3157 3267 -5 652 321 37 1 chr2 124433753 124433981 -126253873 + MIR SINE MIR 9 248 -14 3230 192 37 16 chr2 124434485 124435194 -126252660 + L1MC1 LINE L1 5610 6333 0 328 264 16 8 chr2 124435383 124435504 -126252350 + (TA)n Simple_repeat Simple_repeat 2 123 0 905 252 109 9 chr2 124436823 124437145 -126250709 - L1ME1 LINE L1 -5 6161 5808 1757 135 20 30 chr2 124437307 124437604 -126250250 - AluSx SINE Alu -18 294 1 249 139 0 0 chr2 124437873 124437916 -126249938 + (TG)n Simple_repeat Simple_repeat 2 44 0 325 294 7 62 chr2 124438166 124438312 -126249542 - LTR67 LTR ERVL -18 539 402 6387 25 5 1 chr2 124438886 124439680 -126248174 - L1PA3 LINE L1 0 6155 5380 293 172 16 0 chr2 124439899 124439963 -126247891 + (TA)n Simple_repeat Simple_repeat 2 66 0 24 32 0 0 chr2 124440045 124440076 -126247778 + AT_rich Low_complexity Low_complexity 1 31 0 22 56 0 0 chr2 124440115 124440151 -126247703 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr2 124440513 124440544 -126247310 + AT_rich Low_complexity Low_complexity 1 31 0 241 189 75 0 chr2 124441405 124441458 -126246396 - MER94 DNA DNA -72 62 6 495 339 23 18 chr2 124441495 124441713 -126246141 + L2 LINE L2 1869 2087 -1227 438 138 12 0 chr2 124441732 124441812 -126246042 - L1MB2 LINE L1 0 6171 6091 2180 254 38 29 chr2 124441821 124442826 -126245028 - L1 LINE L1 -3312 3070 2052 269 186 0 17 chr2 124442852 124442911 -126244943 - MER50 LTR ERV1 -178 556 499 1057 262 54 34 chr2 124443003 124443468 -126244386 - L1 LINE L1 -4762 1551 1078 1617 229 26 3 chr2 124444045 124444390 -126243464 - MLT1A1 LTR MaLR 0 365 13 265 384 35 12 chr2 124444447 124444619 -126243235 - MIR SINE MIR -30 232 57 198 191 0 0 chr2 124444769 124444811 -126243043 + (CA)n Simple_repeat Simple_repeat 2 43 0 325 395 31 5 chr2 124446219 124446414 -126241440 + L2 LINE L2 835 1034 -2280 191 146 65 16 chr2 124446554 124446677 -126241177 + (TA)n Simple_repeat Simple_repeat 2 130 0 542 335 118 21 chr2 124446689 124446937 -126240917 + L2 LINE L2 1205 1428 -1886 210 91 0 0 chr2 124446937 124446970 -126240884 + (CA)n Simple_repeat Simple_repeat 1 33 0 542 335 118 21 chr2 124446970 124447154 -126240700 + L2 LINE L2 1428 1679 -1635 25 31 0 0 chr2 124447497 124447529 -126240325 + AT_rich Low_complexity Low_complexity 1 32 0 417 277 106 32 chr2 124447708 124447896 -126239958 + L1MC1 LINE L1 636 837 -5368 613 318 47 52 chr2 124448016 124448610 -126239244 + L1MC1 LINE L1 1049 1639 -4757 194 81 27 0 chr2 124448622 124448659 -126239195 + (CA)n Simple_repeat Simple_repeat 2 39 0 1424 6 0 6 chr2 124448773 124448942 -126238912 + L1P LINE L1 4277 4444 -1702 209 56 0 28 chr2 124448964 124449000 -126238854 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1501 37 11 0 chr2 124449003 124449190 -126238664 - L1PA4 LINE L1 -3 6152 5964 362 175 29 22 chr2 124449846 124449983 -126237871 + (TA)n Simple_repeat Simple_repeat 1 138 0 306 280 147 19 chr2 124450755 124450912 -126236942 - MIR SINE MIR -23 239 63 7579 218 37 31 chr2 124451145 124451745 -126236109 + L1MC1 LINE L1 2763 3358 -3044 252 59 0 0 chr2 124451745 124451779 -126236075 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2302 97 3 0 chr2 124451782 124452091 -126235763 + AluSq SINE Alu 1 310 -3 7579 218 37 31 chr2 124452091 124455096 -126232758 + L1MC1 LINE L1 3359 6394 -8 189 0 0 0 chr2 124455340 124455361 -126232493 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 243 0 0 0 chr2 124455440 124455467 -126232387 + (T)n Simple_repeat Simple_repeat 1 27 0 2083 217 102 48 chr2 124456174 124456224 -126231630 + L1MC3 LINE L1 7083 7129 -656 2406 85 0 0 chr2 124456224 124456529 -126231325 - AluSc SINE Alu -4 305 1 2083 217 102 48 chr2 124456529 124456928 -126230926 + L1MC3 LINE L1 7129 7582 -203 2242 46 0 11 chr2 124456928 124457208 -126230646 + AluY SINE Alu 35 311 0 2083 217 102 48 chr2 124457208 124457424 -126230430 + L1MC3 LINE L1 7582 7785 0 21 71 0 0 chr2 124457599 124457641 -126230213 + AT_rich Low_complexity Low_complexity 1 42 0 44 70 0 0 chr2 124459101 124459187 -126228667 + AT_rich Low_complexity Low_complexity 1 86 0 431 277 108 30 chr2 124459400 124459566 -126228288 + MIR SINE MIR 63 241 -21 204 321 37 0 chr2 124459777 124459858 -126227996 - L2 LINE L2 0 3313 3230 1679 130 80 42 chr2 124461094 124461455 -126226399 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr2 124462731 124462753 -126225101 + AT_rich Low_complexity Low_complexity 1 22 0 371 141 16 0 chr2 124463352 124463416 -126224438 - MER58 DNA MER1_type -14 2406 2342 7361 215 72 16 chr2 124463806 124465426 -126222428 + MER52A LTR ERV1 46 1755 0 2339 113 0 0 chr2 124465449 124465758 -126222096 + AluSc SINE Alu 1 309 0 26 30 0 0 chr2 124466265 124466298 -126221556 + AT_rich Low_complexity Low_complexity 1 33 0 2157 124 0 10 chr2 124466632 124466946 -126220908 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 124467700 124467721 -126220133 + AT_rich Low_complexity Low_complexity 1 21 0 248 322 47 9 chr2 124467810 124468104 -126219750 + L1ME LINE L1 5184 5491 -671 254 215 215 0 chr2 124468160 124468239 -126219615 + MER110A LTR ERV1 70 165 -303 429 261 163 23 chr2 124468306 124468563 -126219291 + MER110A LTR ERV1 176 468 0 686 289 76 16 chr2 124468656 124468971 -126218883 + L1ME2 LINE L1 1499 1832 -4564 3110 258 52 45 chr2 124469082 124470637 -126217217 + L1ME2 LINE L1 1733 3253 -2962 2058 143 3 0 chr2 124470637 124470945 -126216909 + AluSc SINE Alu 1 309 0 3110 258 52 45 chr2 124470945 124471123 -126216731 + L1ME2 LINE L1 3253 3428 -2787 954 301 65 33 chr2 124471119 124471661 -126216193 + L1ME2 LINE L1 5423 5981 -252 * 2617 69 0 11 chr2 124471663 124472029 -126215825 - L1PA5 LINE L1 0 6154 5812 2134 145 23 10 chr2 124472391 124472784 -126215070 + L1MA5A LINE L1 5897 6294 -3 27 49 0 0 chr2 124472929 124472970 -126214884 + AT_rich Low_complexity Low_complexity 1 41 0 393 287 75 36 chr2 124473198 124473524 -126214330 - L1P4 LINE L1 -557 5609 5267 775 308 107 26 chr2 124473944 124474373 -126213481 - L2 LINE L2 0 3313 2850 4025 137 34 18 chr2 124474383 124475063 -126212791 + LTR8 LTR ERV1 1 691 0 231 36 0 0 chr2 124475330 124475358 -126212496 + (CA)n Simple_repeat Simple_repeat 1 28 0 311 256 152 0 chr2 124475833 124475958 -126211896 - MIR SINE MIR -28 234 91 241 318 84 9 chr2 124476209 124476316 -126211538 - L2 LINE L2 -32 3281 3167 190 333 46 19 chr2 124476642 124476750 -126211104 - MIR SINE MIR -44 218 108 278 225 23 124 chr2 124476948 124477077 -126210777 - L1ME3A LINE L1 -51 6119 6004 209 184 0 0 chr2 124477958 124477996 -126209858 + GA-rich Low_complexity Low_complexity 1 38 0 2782 178 38 21 chr2 124478873 124479407 -126208447 + L1M4c LINE L1 22 564 -5820 12264 234 34 19 chr2 124479418 124485765 -126202089 + L1M1 LINE L1 2 6446 -559 7533 220 40 25 chr2 124485780 124486322 -126201532 + L1M4c LINE L1 554 1086 -5296 2236 85 3 28 chr2 124486322 124486640 -126201214 + AluY SINE Alu 2 311 0 7533 220 40 25 chr2 124486640 124489310 -126198544 + L1M4c LINE L1 1086 3818 -2564 2046 167 66 5 chr2 124489311 124489736 -126198118 + L1MB3 LINE L1 5731 6181 -2 455 296 48 32 chr2 124489762 124489984 -126197870 + MIR SINE MIR 20 243 -19 207 333 0 0 chr2 124490440 124490497 -126197357 - MIR SINE MIR -148 114 58 232 395 0 0 chr2 124490585 124490661 -126197193 - MER5A DNA MER1_type -49 140 65 229 156 16 16 chr2 124491060 124491124 -126196730 + (TA)n Simple_repeat Simple_repeat 2 65 0 30 0 0 0 chr2 124491397 124491427 -126196427 + AT_rich Low_complexity Low_complexity 1 30 0 1998 169 83 0 chr2 124491427 124491834 -126196020 + L1M2 LINE L1 5297 5737 -563 21 57 0 0 chr2 124492364 124492399 -126195455 + AT_rich Low_complexity Low_complexity 1 35 0 368 297 115 36 chr2 124492895 124493087 -126194767 - MIR SINE MIR -6 256 50 23 0 0 0 chr2 124494988 124495011 -126192843 + AT_rich Low_complexity Low_complexity 1 23 0 580 297 57 14 chr2 124495387 124495602 -126192252 + MIR SINE MIR 6 228 -34 1330 206 39 21 chr2 124496011 124496293 -126191561 + AluJo SINE Alu 1 287 -25 191 61 30 0 chr2 124496297 124496330 -126191524 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 186 268 18 18 chr2 124496515 124496571 -126191283 + L2 LINE L2 2640 2695 -619 1737 131 10 3 chr2 124496812 124497102 -126190752 + L1PB1 LINE L1 5857 6148 -3 225 0 0 0 chr2 124497788 124497813 -126190041 + (CA)n Simple_repeat Simple_repeat 1 25 0 275 217 157 17 chr2 124499939 124500077 -126187777 - MIR SINE MIR -54 154 2 190 291 34 91 chr2 124500613 124500788 -126187066 + MIR SINE MIR 23 187 -75 1763 157 46 3 chr2 124500922 124501227 -126186627 - MER46B DNA MER2_type 0 236 44 532 288 86 77 chr2 124502013 124502186 -126185668 + L1ME LINE L1 923 1093 -5854 2466 47 0 31 chr2 124502186 124502504 -126185350 + AluY SINE Alu 1 308 -3 532 288 86 77 chr2 124502504 124502878 -126184976 + L1ME LINE L1 1093 1475 -5472 306 295 60 48 chr2 124502896 124503062 -126184792 + L1ME LINE L1 1378 1545 -5314 1322 220 0 54 chr2 124503071 124503348 -126184506 + AluJo SINE Alu 7 268 -44 276 302 67 15 chr2 124503360 124503753 -126184101 + L1ME LINE L1 1541 2099 -4905 238 167 0 0 chr2 124503896 124503932 -126183922 + (CA)n Simple_repeat Simple_repeat 2 37 0 1581 170 145 27 chr2 124503934 124504299 -126183555 + Tigger2a DNA MER2_type 2 409 -25 265 294 0 12 chr2 124504299 124504384 -126183470 + L1MB3 LINE L1 3753 3836 -2310 * 1469 247 55 13 chr2 124504382 124504913 -126182941 + L1MB3 LINE L1 4781 5333 -813 390 284 49 96 chr2 124505026 124505557 -126182297 + L1ME LINE L1 2150 2655 -4483 532 206 0 37 chr2 124505583 124505719 -126182135 - L1 LINE L1 -2083 4063 3933 816 144 0 0 chr2 124505719 124505837 -126182017 + AluSq/x SINE Alu 1 118 -195 3350 43 0 5 chr2 124505838 124506255 -126181599 + L1PA4 LINE L1 5738 6152 -3 1292 73 0 58 chr2 124506370 124506561 -126181293 + AluY SINE Alu 119 298 -13 2608 211 21 49 chr2 124506563 124507278 -126180576 + L1MB3 LINE L1 5318 6012 -171 4232 237 56 3 chr2 124507281 124508373 -126179481 + L1PA13 LINE L1 5005 6160 -3 2702 258 97 17 chr2 124508392 124509778 -126178076 + L1ME LINE L1 2945 4441 -2516 1851 148 59 9 chr2 124509778 124510116 -126177738 - THE1A LTR MaLR 0 355 1 9920 125 45 3 chr2 124510117 124511632 -126176222 - THE1A-int LTR MaLR -1 1579 1 1165 179 32 0 chr2 124511632 124511850 -126176004 - THE1A LTR MaLR 0 355 131 25 75 0 0 chr2 124512071 124512124 -126175730 + AT_rich Low_complexity Low_complexity 1 53 0 215 307 163 20 chr2 124512393 124512546 -126175308 - MIR SINE MIR 0 262 88 1065 214 105 47 chr2 124515580 124515922 -126171932 + MLT1A1 LTR MaLR 3 364 -1 1886 199 41 11 chr2 124516419 124516871 -126170983 + L1M3 LINE L1 5217 5680 -503 375 335 139 0 chr2 124516977 124517264 -126170590 - L1MDa LINE L1 -4517 2023 1697 250 276 77 77 chr2 124517726 124517896 -126169958 - L1MDa LINE L1 -5645 885 716 186 43 0 0 chr2 124518042 124518065 -126169789 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 944 176 56 9 chr2 124518156 124518458 -126169396 - MLT1B LTR MaLR 0 390 11 209 274 20 0 chr2 124519536 124519587 -126168267 + MIR SINE MIR 65 116 -146 373 253 23 0 chr2 124519781 124519868 -126167986 + L2 LINE L2 3225 3313 0 2696 236 24 5 chr2 124520782 124521401 -126166453 - MER82 DNA MER2_type 0 653 23 204 40 0 0 chr2 124522405 124522430 -126165424 + (A)n Simple_repeat Simple_repeat 1 25 0 1247 247 117 13 chr2 124522455 124522832 -126165022 - MLT1F LTR MaLR -1 541 126 210 254 195 42 chr2 124523521 124523639 -126164215 - MIR SINE MIR -93 169 34 30 0 0 0 chr2 124525679 124525709 -126162145 + AT_rich Low_complexity Low_complexity 1 30 0 2022 114 3 14 chr2 124526867 124527164 -126160690 - AluSc SINE Alu -14 295 2 540 253 134 10 chr2 124527196 124527398 -126160456 + L2 LINE L2 1284 1510 -1804 183 42 0 0 chr2 124527511 124527535 -126160319 + (CA)n Simple_repeat Simple_repeat 2 25 0 4313 254 94 24 chr2 124527666 124527827 -126160027 - L1 LINE L1 -2266 4116 3968 1872 144 31 47 chr2 124527827 124528208 -126159646 + THE1C LTR MaLR 1 375 0 4313 254 94 24 chr2 124528208 124531227 -126156627 - L1 LINE L1 -2414 3968 781 204 67 0 0 chr2 124531321 124531351 -126156503 + (TC)n Simple_repeat Simple_repeat 1 30 0 2336 86 16 0 chr2 124531914 124532217 -126155637 - AluSq SINE Alu -5 308 1 470 319 82 85 chr2 124532283 124532857 -126154997 - HAL1 LINE L1 -988 1519 948 379 326 58 44 chr2 124533159 124533524 -126154330 - HAL1 LINE L1 -2130 377 8 274 368 0 0 chr2 124533533 124533650 -126154204 + L2 LINE L2 1818 1934 -1380 213 333 58 0 chr2 124534032 124534119 -126153735 - L2 LINE L2 -215 3057 2966 3538 203 38 34 chr2 124534168 124534380 -126153474 - Tigger6a DNA MER2_type -697 900 690 2071 116 3 22 chr2 124534380 124534698 -126153156 - AluSq SINE Alu -1 312 1 3538 203 38 34 chr2 124534698 124535351 -126152503 - Tigger6a DNA MER2_type -907 690 31 23 33 0 0 chr2 124537195 124537225 -126150629 + AT_rich Low_complexity Low_complexity 1 30 0 304 266 0 21 chr2 124537742 124537836 -126150018 - L1ME2 LINE L1 -171 5993 5902 10875 154 34 16 chr2 124537840 124539745 -126148109 - Tigger2 DNA MER2_type -3 2715 776 924 210 137 4 chr2 124539772 124540005 -126147849 + MLT1C LTR MaLR 204 467 0 279 203 149 14 chr2 124540090 124540164 -126147690 + MIR3 SINE MIR 107 190 -18 214 192 19 0 chr2 124540731 124540765 -126147089 + T-rich Low_complexity Low_complexity 3 40 -15 4324 14 0 0 chr2 124540765 124541259 -126146595 - L1PA2 LINE L1 -2 6153 5660 214 192 19 0 chr2 124541259 124541276 -126146578 + T-rich Low_complexity Low_complexity 40 55 0 757 235 71 0 chr2 124541598 124541768 -126146086 - MER5A DNA MER1_type -7 182 1 220 253 32 74 chr2 124544149 124544244 -126143610 - L2 LINE L2 0 3313 3223 398 235 196 22 chr2 124544311 124544541 -126143313 - MER5C DNA MER1_type -54 270 1 27 0 0 0 chr2 124545241 124545268 -126142586 + AT_rich Low_complexity Low_complexity 1 27 0 1999 179 60 21 chr2 124545447 124545865 -126141989 - Tigger2a DNA MER2_type 0 434 1 280 222 12 25 chr2 124546261 124546342 -126141512 - L1M4 LINE L1 -5627 915 836 * 468 252 0 22 chr2 124546332 124546467 -126141387 - L1MC2 LINE L1 -212 6132 6001 2780 29 0 0 chr2 124547142 124547458 -126140396 + AluYb8 SINE Alu 1 316 -2 25 0 0 0 chr2 124547545 124547570 -126140284 + AT_rich Low_complexity Low_complexity 1 25 0 4888 259 56 32 chr2 124547710 124548703 -126139151 - L1M4 LINE L1 -4831 2024 1056 258 105 0 0 chr2 124548703 124548741 -126139113 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 4888 259 56 32 chr2 124548741 124549725 -126138129 - L1M4 LINE L1 -5799 1056 11 21 57 0 0 chr2 124551592 124551627 -126136227 + AT_rich Low_complexity Low_complexity 1 35 0 1383 192 40 14 chr2 124551766 124552042 -126135812 - AluJb SINE Alu -19 283 1 31 0 0 0 chr2 124553279 124553310 -126134544 + AT_rich Low_complexity Low_complexity 1 31 0 40 67 0 0 chr2 124553531 124553606 -126134248 + AT_rich Low_complexity Low_complexity 1 75 0 4882 189 34 14 chr2 124553721 124555314 -126132540 - L1PA16 LINE L1 -9 6808 5185 2035 255 187 20 chr2 124555309 124556209 -126131645 - L1PA16 LINE L1 -4446 2351 1280 * 422 196 0 0 chr2 124556225 124556317 -126131537 - L1 LINE L1 -3100 3046 2955 28 29 0 0 chr2 124556447 124556482 -126131372 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 124556908 124556937 -126130917 + AT_rich Low_complexity Low_complexity 1 29 0 201 39 0 0 chr2 124557093 124557119 -126130735 + (CA)n Simple_repeat Simple_repeat 2 27 0 322 283 25 42 chr2 124558782 124558902 -126128952 + MIR SINE MIR 16 133 -129 190 303 40 26 chr2 124559372 124559448 -126128406 - MER5A DNA MER1_type -112 77 1 1525 99 81 0 chr2 124559510 124559677 -126128177 - AluY SINE Alu -5 306 115 492 18 0 0 chr2 124559677 124559734 -126128120 + (TG)n Simple_repeat Simple_repeat 2 58 0 1525 99 81 0 chr2 124559734 124559789 -126128065 - AluY SINE Alu -196 115 66 216 0 0 0 chr2 124559789 124559813 -126128041 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 270 368 83 0 chr2 124560313 124560457 -126127397 - MIR SINE MIR -22 240 85 2036 176 62 2 chr2 124560997 124561401 -126126453 + MSTA LTR MaLR 1 428 0 1329 210 26 7 chr2 124561476 124561781 -126126073 + L1MB1 LINE L1 5858 6168 0 248 261 162 0 chr2 124562023 124562134 -126125720 + L1MCc LINE L1 1337 1465 -4958 369 220 10 30 chr2 124562149 124562249 -126125605 + L1ME1 LINE L1 6063 6160 -6 24 0 0 0 chr2 124562771 124562795 -126125059 + AT_rich Low_complexity Low_complexity 1 24 0 31 0 0 0 chr2 124564046 124564077 -126123777 + AT_rich Low_complexity Low_complexity 1 31 0 258 225 0 0 chr2 124564427 124564507 -126123347 + (TA)n Simple_repeat Simple_repeat 1 80 0 389 209 164 45 chr2 124565119 124565320 -126122534 - L1M4 LINE L1 -1174 4972 4748 387 330 115 4 chr2 124565498 124565768 -126122086 - L1M4 LINE L1 -1544 4602 4303 1555 188 43 46 chr2 124565796 124566211 -126121643 - L1MC3 LINE L1 -21 7764 7351 334 342 68 5 chr2 124566457 124566647 -126121207 - L1M4 LINE L1 -3824 2322 2121 290 258 80 68 chr2 124566969 124567132 -126120722 + LTR67 LTR ERVL 386 550 -7 503 305 57 64 chr2 124567141 124567536 -126120318 - L1MEc LINE L1 -3684 2531 2182 243 0 0 0 chr2 124568311 124568338 -126119516 + (CA)n Simple_repeat Simple_repeat 2 28 0 4735 130 30 26 chr2 124568532 124569303 -126118551 - MER4E LTR ERV1 -5 774 1 24 32 0 0 chr2 124569368 124569399 -126118455 + AT_rich Low_complexity Low_complexity 1 31 0 946 219 56 4 chr2 124569427 124569660 -126118194 - MLT1D LTR MaLR 0 505 261 1137 132 5 52 chr2 124570127 124570339 -126117515 + MER1B DNA MER1_type 138 339 0 1252 220 57 48 chr2 124570348 124570702 -126117152 + MLT1A2 LTR MaLR 5 361 -13 560 328 65 4 chr2 124572071 124572318 -126115536 + ERVL LTR ERVL 2072 2333 -3431 216 279 15 44 chr2 124572417 124572485 -126115369 - MIR3 SINE MIR -22 186 121 37 23 0 0 chr2 124573762 124573806 -126114048 + AT_rich Low_complexity Low_complexity 1 44 0 1698 236 19 57 chr2 124574264 124574742 -126113112 + MLT2B1 LTR ERVL 1 460 -60 270 160 0 0 chr2 124574770 124574820 -126113034 + (CA)n Simple_repeat Simple_repeat 1 50 0 221 0 35 0 chr2 124575643 124575672 -126112182 + (CA)n Simple_repeat Simple_repeat 2 31 0 531 301 98 0 chr2 124575749 124575902 -126111952 - MER5A DNA MER1_type -21 168 1 22 0 0 0 chr2 124576364 124576386 -126111468 + AT_rich Low_complexity Low_complexity 1 22 0 825 306 83 49 chr2 124576915 124577731 -126110123 - L1MC4 LINE L1 -65 7977 7134 642 306 91 46 chr2 124577725 124578264 -126109590 - L1MC4a LINE L1 -953 6855 6293 * 221 0 0 33 chr2 124578270 124578300 -126109554 + (TTA)n Simple_repeat Simple_repeat 2 30 0 412 276 41 63 chr2 124578310 124578578 -126109276 + L1ME1 LINE L1 2 263 -5782 1037 131 0 0 chr2 124578630 124578775 -126109079 - AluSc SINE Alu -88 221 77 1189 298 16 6 chr2 124578816 124579303 -126108551 + L1ME1 LINE L1 2930 3421 -3143 2851 163 11 0 chr2 124579329 124579965 -126107889 + L1P5 LINE L1 5100 5742 -412 18481 171 25 25 chr2 124579965 124583380 -126104474 - L1M1 LINE L1 -4140 3425 10 337 269 82 18 chr2 124583384 124583555 -126104299 + L1ME1 LINE L1 3851 4032 -2532 * 1750 273 33 66 chr2 124583524 124584731 -126103123 + L1ME1 LINE L1 4880 6017 -567 200 59 29 0 chr2 124584731 124584765 -126103089 + (CA)n Simple_repeat Simple_repeat 2 36 0 1750 273 33 66 chr2 124584765 124585118 -126102736 + L1ME1 LINE L1 6017 6380 -204 535 259 83 10 chr2 124585120 124585313 -126102541 + L1MC4a LINE L1 6277 6483 -1325 584 226 0 0 chr2 124585335 124585459 -126102395 + MLT1F1 LTR MaLR 1 124 -443 649 268 82 0 chr2 124585459 124585701 -126102153 + L1MD3 LINE L1 7228 7665 -326 2029 162 36 8 chr2 124585704 124586062 -126101792 + L1MC/D LINE L1 5446 5813 -520 694 245 31 13 chr2 124586114 124586273 -126101581 - MLT2B2 LTR ERVL -157 358 197 290 208 0 0 chr2 124586681 124586729 -126101125 - MLT2B2 LTR ERVL -318 197 150 1461 251 9 3 chr2 124586729 124587044 -126100810 + L1P4 LINE L1 1020 1336 -5513 2541 92 3 47 chr2 124587044 124587169 -126100685 - THE1B LTR MaLR 0 364 235 6554 62 49 5 chr2 124587169 124588026 -126099828 - MER11D LTR ERVK -2 895 1 2541 92 3 47 chr2 124588026 124588281 -126099573 - THE1B LTR MaLR -129 235 1 8473 183 55 16 chr2 124588281 124590316 -126097538 + L1P4 LINE L1 1332 3430 -3419 226 240 0 0 chr2 124590374 124590424 -126097430 + L1P4 LINE L1 3540 3589 -3260 1511 122 12 12 chr2 124590424 124590671 -126097183 - L1PA15 LINE L1 -3 6162 5916 8183 202 34 9 chr2 124590766 124592966 -126094888 - L1PA15 LINE L1 -236 5929 3656 183 100 0 0 chr2 124592966 124592996 -126094858 + (TTG)n Simple_repeat Simple_repeat 2 31 0 8183 202 34 9 chr2 124592996 124593259 -126094595 - L1PA15 LINE L1 -2509 3656 3401 * 8209 225 20 35 chr2 124593257 124595060 -126092794 + L1P4 LINE L1 3581 5327 -1542 2517 67 0 3 chr2 124595060 124595372 -126092482 + AluY SINE Alu 1 311 0 8209 225 20 35 chr2 124595372 124596310 -126091544 + L1P4 LINE L1 5327 6278 -591 243 211 0 0 chr2 124596311 124596368 -126091486 - L1 LINE L1 -916 5230 5174 * 1454 119 23 0 chr2 124596364 124596582 -126091272 + L1P4 LINE L1 6282 6504 -365 230 161 74 0 chr2 124596582 124596663 -126091191 + (TA)n Simple_repeat Simple_repeat 2 88 0 376 326 84 31 chr2 124596663 124596718 -126091136 - L1MC4 LINE L1 -1339 6703 6652 1943 168 29 8 chr2 124596718 124597094 -126090760 + L1PA16 LINE L1 5783 6166 0 376 326 84 31 chr2 124597094 124597360 -126090494 - L1MC4 LINE L1 -1390 6652 6365 21 0 0 0 chr2 124597470 124597491 -126090363 + AT_rich Low_complexity Low_complexity 1 21 0 584 265 129 31 chr2 124597509 124598281 -126089573 - L1MC4a LINE L1 -1623 6185 5296 504 280 145 70 chr2 124598323 124598555 -126089299 - L1MC4a LINE L1 -893 5253 5040 190 0 0 0 chr2 124598555 124598576 -126089278 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1955 149 0 0 chr2 124598576 124598858 -126088996 - AluSx SINE Alu -30 282 1 504 280 145 70 chr2 124598858 124599106 -126088748 - L1MC4a LINE L1 -1105 5041 4736 381 291 118 30 chr2 124599302 124599505 -126088349 - L1MC4a LINE L1 -1631 4515 4295 266 299 26 8 chr2 124599528 124599645 -126088209 - L1MC4a LINE L1 -1926 4220 4102 234 288 83 15 chr2 124599708 124599913 -126087941 - L1ME LINE L1 -303 5818 5600 23 68 0 0 chr2 124600156 124600200 -126087654 + AT_rich Low_complexity Low_complexity 1 44 0 602 266 101 24 chr2 124600621 124600828 -126087026 - MIR SINE MIR -25 237 15 650 262 12 23 chr2 124601027 124601199 -126086655 + MER45A DNA AcHobo 8 177 -1 2615 42 0 0 chr2 124601333 124601641 -126086213 - AluY SINE Alu 0 311 4 21 0 0 0 chr2 124601903 124601924 -126085930 + AT_rich Low_complexity Low_complexity 1 21 0 446 372 48 63 chr2 124602089 124602677 -126085177 + L1MEd LINE L1 304 882 -5237 262 303 158 20 chr2 124602751 124603005 -126084849 + L1MEd LINE L1 969 1257 -4862 2299 272 65 36 chr2 124603101 124604014 -126083840 + L1MCb LINE L1 5 943 -5102 23 0 0 0 chr2 124604586 124604609 -126083245 + AT_rich Low_complexity Low_complexity 1 23 0 200 366 29 52 chr2 124604708 124604880 -126082974 + MIR SINE MIR 55 222 -40 1565 262 93 14 chr2 124605091 124605522 -126082332 + MLT2B1 LTR ERVL 21 485 -35 2570 111 0 11 chr2 124605599 124605967 -126081887 + THE1B LTR MaLR 1 364 0 8730 132 61 36 chr2 124605967 124607486 -126080368 + THE1B-int LTR MaLR 1 1556 -24 2411 123 6 8 chr2 124607492 124607857 -126079997 + THE1B LTR MaLR 1 364 0 289 114 0 0 chr2 124607857 124607901 -126079953 + MLT2D LTR ERVL 371 414 0 2224 114 3 0 chr2 124607996 124608294 -126079560 + AluSp SINE Alu 1 299 -14 1648 219 5 32 chr2 124608417 124608792 -126079062 - MLT1A1 LTR MaLR 0 365 1 445 281 15 0 chr2 124608817 124608952 -126078902 + LTR16A1 LTR ERVL 303 439 -18 23 0 0 0 chr2 124609239 124609262 -126078592 + AT_rich Low_complexity Low_complexity 1 23 0 2087 166 83 10 chr2 124609697 124610095 -126077759 - L1PA15 LINE L1 -3 6162 5736 22 35 0 0 chr2 124610110 124610139 -126077715 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr2 124611820 124611862 -126075992 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 124611992 124612013 -126075841 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 124612122 124612143 -126075711 + AT_rich Low_complexity Low_complexity 1 21 0 2094 137 0 0 chr2 124612323 124612613 -126075241 + AluSx SINE Alu 3 295 -17 531 0 0 0 chr2 124612613 124612672 -126075182 + (CATA)n Simple_repeat Simple_repeat 2 60 0 264 236 14 14 chr2 124613696 124613768 -126074086 + (TATATG)n Simple_repeat Simple_repeat 6 77 0 245 328 35 26 chr2 124614059 124614175 -126073679 + MER20 DNA MER1_type 3 119 -100 183 42 0 0 chr2 124614202 124614226 -126073628 + (CAA)n Simple_repeat Simple_repeat 2 25 0 242 305 0 24 chr2 124614663 124614745 -126073109 - L2 LINE L2 -7 3306 3227 7365 42 0 0 chr2 124615326 124616263 -126071591 - L1PA4 LINE L1 -2 6153 5218 222 337 69 10 chr2 124616274 124616375 -126071479 + MIR SINE MIR 34 140 -122 2122 135 48 22 chr2 124616393 124616748 -126071106 + THE1B LTR MaLR 1 364 0 554 316 116 0 chr2 124617199 124617389 -126070465 + MIR SINE MIR 32 243 -19 2680 101 0 0 chr2 124617402 124617757 -126070097 + THE1A LTR MaLR 1 355 0 222 155 35 35 chr2 124617998 124618056 -126069798 + GA-rich Low_complexity Low_complexity 3 60 0 591 294 201 16 chr2 124619072 124619510 -126068344 + LTR33 LTR ERVL 1 519 -2 30 0 0 0 chr2 124620268 124620298 -126067556 + AT_rich Low_complexity Low_complexity 1 30 0 281 333 36 0 chr2 124621070 124621181 -126066673 - MIR SINE MIR -72 190 76 810 219 5 36 chr2 124621819 124622038 -126065816 + L1M4 LINE L1 3731 3942 -2204 1558 223 41 22 chr2 124622053 124622466 -126065388 + MLT1C LTR MaLR 42 462 -5 1540 204 38 3 chr2 124622466 124622834 -126065020 + L1MB5 LINE L1 5785 6165 -9 292 301 11 0 chr2 124624306 124624399 -126063455 + MIR SINE MIR 169 262 0 1076 204 5 0 chr2 124624974 124625165 -126062689 - AluJo SINE Alu -120 192 1 708 294 42 19 chr2 124626727 124627037 -126060817 + MLT1L LTR MaLR 6 405 -210 336 102 0 0 chr2 124627213 124627262 -126060592 + (TTCC)n Simple_repeat Simple_repeat 2 50 0 1145 267 66 34 chr2 124628794 124629325 -126058529 + L1ME3 LINE L1 5612 6159 -3 184 343 69 0 chr2 124630536 124630638 -126057216 - L2 LINE L2 -23 3290 3182 983 168 46 0 chr2 124630890 124631063 -126056791 + MLT2B2 LTR ERVL 4 184 -331 643 171 0 0 chr2 124631060 124631171 -126056683 + MLT2B2 LTR ERVL 404 514 -1 * 223 167 106 15 chr2 124631447 124631513 -126056341 + L2 LINE L2 2207 2278 -1036 180 0 0 0 chr2 124631543 124631563 -126056291 + (CA)n Simple_repeat Simple_repeat 1 20 0 247 317 88 66 chr2 124631564 124631791 -126056063 - L2 LINE L2 -230 3042 2811 183 100 0 0 chr2 124631841 124631871 -126055983 + (TTA)n Simple_repeat Simple_repeat 2 31 0 259 246 26 18 chr2 124632401 124632515 -126055339 + (TA)n Simple_repeat Simple_repeat 2 116 0 505 230 15 0 chr2 124632515 124632650 -126055204 - Charlie7 DNA MER1_type -276 2336 2200 1138 269 35 17 chr2 124632670 124633075 -126054779 - Charlie7 DNA MER1_type -1949 663 252 1241 197 32 0 chr2 124633153 124633437 -126054417 - L1 LINE L1 -749 5397 5105 2321 163 5 2 chr2 124633437 124633858 -126053996 + L1MA3 LINE L1 5877 6300 -5 356 284 64 55 chr2 124633861 124634188 -126053666 - LTR37B LTR ERV1 -45 423 94 182 289 26 66 chr2 124635502 124635578 -126052276 + MIR SINE MIR 75 147 -115 461 240 29 23 chr2 124636883 124637054 -126050800 + LTR37B LTR ERV1 106 277 -191 435 78 69 20 chr2 124637054 124637156 -126050698 + CT-rich Low_complexity Low_complexity 4 110 0 250 206 27 14 chr2 124637199 124637272 -126050582 + LTR37B LTR ERV1 330 403 -65 261 196 0 0 chr2 124637325 124637381 -126050473 + (TA)n Simple_repeat Simple_repeat 1 56 0 365 388 33 29 chr2 124637448 124637690 -126050164 + MIR SINE MIR 3 245 -17 361 327 39 7 chr2 124638752 124638905 -126048949 + MIR SINE MIR 35 192 -70 1892 138 4 0 chr2 124639956 124640224 -126047630 - AluSx SINE Alu -37 275 7 575 337 90 25 chr2 124640228 124640715 -126047139 + MERVL LTR ERVL 4033 4551 -934 444 351 5 0 chr2 124640977 124641168 -126046686 + MERVL LTR ERVL 4919 5110 -654 189 0 0 0 chr2 124641462 124641483 -126046371 + (T)n Simple_repeat Simple_repeat 1 21 0 238 234 31 16 chr2 124641680 124641744 -126046110 + LTR33 LTR ERVL 10 74 -447 435 251 18 37 chr2 124641932 124642095 -126045759 + LTR33 LTR ERVL 352 511 -10 3352 201 31 36 chr2 124642659 124643374 -126044480 - MER50 LTR ERV1 -23 711 1 337 333 121 62 chr2 124643592 124643898 -126043956 - L1MEd LINE L1 -5737 382 59 21 0 0 0 chr2 124645749 124645770 -126042084 + AT_rich Low_complexity Low_complexity 1 21 0 963 213 92 80 chr2 124646128 124646466 -126041388 - MER2 DNA MER2_type -1 343 2 1554 177 46 0 chr2 124646503 124646763 -126041091 + AluJb SINE Alu 5 276 -36 1124 271 135 20 chr2 124647076 124647736 -126040118 - L1ME3A LINE L1 -170 5992 5256 627 263 85 39 chr2 124647826 124648236 -126039618 - L1ME3A LINE L1 -929 5217 4789 862 202 88 10 chr2 124648403 124648559 -126039295 - AluJo SINE Alu -21 291 116 189 0 0 0 chr2 124648559 124648580 -126039274 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 862 202 88 10 chr2 124648580 124648616 -126039238 - AluJo SINE Alu -196 116 84 228 284 45 35 chr2 124648640 124648841 -126039013 - L1ME3A LINE L1 -2753 3393 3191 1793 112 0 0 chr2 124648908 124649140 -126038714 - AluSx SINE Alu -27 285 54 1353 117 24 5 chr2 124649300 124649506 -126038348 + AluSg/x SINE Alu 100 309 -3 434 276 50 123 chr2 124649507 124649717 -126038137 + L1MC4 LINE L1 7525 7690 -352 2019 117 3 23 chr2 124649717 124650016 -126037838 + AluSq SINE Alu 1 293 -20 434 276 50 123 chr2 124650016 124650229 -126037625 + L1MC4 LINE L1 7690 7917 -125 272 208 0 13 chr2 124650212 124650289 -126037565 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 * 328 329 163 21 chr2 124650701 124651187 -126036667 + L1ME4a LINE L1 5563 6117 -4 184 283 0 22 chr2 124651376 124651422 -126036432 - MIR3 SINE MIR -28 180 136 2365 211 35 4 chr2 124652587 124653131 -126034723 + L1MB4 LINE L1 5602 6162 -18 183 353 0 0 chr2 124653381 124653432 -126034422 + L2 LINE L2 3210 3260 -12 12321 196 26 8 chr2 124653892 124656198 -126031656 + L1MA2 LINE L1 14 2361 -5204 2990 210 11 27 chr2 124656221 124656972 -126030882 + L1MA2 LINE L1 4678 5416 -2149 * 6003 160 9 9 chr2 124656966 124658778 -126029076 + L1MA2 LINE L1 5912 7722 -1 1027 193 47 4 chr2 124659017 124659337 -126028517 + L1M3 LINE L1 5154 5487 -681 2061 114 10 13 chr2 124659341 124659649 -126028205 - AluSq SINE Alu -5 308 2 287 333 42 8 chr2 124659650 124659770 -126028084 - MIR SINE MIR -102 160 37 589 224 8 0 chr2 124659908 124660033 -126027821 + L1MD1 LINE L1 19 144 -6396 467 287 122 6 chr2 124660044 124660208 -126027646 + L1MD1 LINE L1 597 779 -5761 3367 242 80 85 chr2 124660251 124661385 -126026469 + L1MD1 LINE L1 2860 3998 -2638 2715 26 0 0 chr2 124661385 124661694 -126026160 + AluYa5 SINE Alu 1 309 -2 3367 242 80 85 chr2 124661694 124662244 -126025610 + L1MD1 LINE L1 3998 4549 -2087 780 210 6 19 chr2 124662244 124662406 -126025448 + FRAM SINE Alu 1 152 -24 3367 242 80 85 chr2 124662406 124664253 -126023601 + L1MD1 LINE L1 4549 6524 -112 2053 65 38 21 chr2 124664253 124664579 -126023275 + AluY SINE Alu 1 311 0 3367 242 80 85 chr2 124664579 124664673 -126023181 + L1MD1 LINE L1 6524 6617 -19 213 132 0 0 chr2 124664723 124664761 -126023093 + (A)n Simple_repeat Simple_repeat 1 38 0 267 31 0 0 chr2 124665735 124665767 -126022087 + (TG)n Simple_repeat Simple_repeat 1 32 0 500 146 7 50 chr2 124666549 124666832 -126021022 + (TA)n Simple_repeat Simple_repeat 1 270 0 2215 84 0 7 chr2 124667278 124667564 -126020290 - AluY SINE Alu -25 286 3 4716 205 4 23 chr2 124668103 124668326 -126019528 - MER54A LTR ERVL 0 901 675 2226 148 69 10 chr2 124668326 124668732 -126019122 - MSTB1 LTR MaLR 0 432 3 4716 205 4 23 chr2 124668732 124668962 -126018892 - MER54A LTR ERVL -226 675 442 1619 186 128 31 chr2 124668962 124669377 -126018477 + MSTB2 LTR MaLR 1 455 -2 4716 205 4 23 chr2 124669377 124669840 -126018014 - MER54A LTR ERVL -459 442 1 27 108 0 0 chr2 124671197 124671308 -126016546 + AT_rich Low_complexity Low_complexity 1 111 0 28 0 0 0 chr2 124671637 124671665 -126016189 + AT_rich Low_complexity Low_complexity 1 28 0 326 268 92 14 chr2 124671678 124671820 -126016034 + L1ME4a LINE L1 5270 5422 -2386 4871 21 2 0 chr2 124671920 124672489 -126015365 + L1PA3 LINE L1 5586 6155 0 302 291 85 40 chr2 124672584 124672831 -126015023 + L1ME4a LINE L1 5655 5912 -209 1714 202 235 9 chr2 124672936 124673485 -126014369 - L1MC3 LINE L1 -2 7783 7111 2799 220 51 41 chr2 124673529 124674292 -126013562 - L1MC3 LINE L1 -979 6806 6036 625 274 8 48 chr2 124674308 124674576 -126013278 - L1MCa LINE L1 -5809 361 3 293 354 118 25 chr2 124674584 124674940 -126012914 - L2 LINE L2 -991 2323 1935 195 69 0 0 chr2 124675678 124675707 -126012147 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 11973 189 30 10 chr2 124675876 124677650 -126010204 - L1MA2 LINE L1 0 7723 5986 363 60 0 0 chr2 124677650 124677700 -126010154 + (TG)n Simple_repeat Simple_repeat 2 51 0 11973 189 30 10 chr2 124677700 124679627 -126008227 - L1MA2 LINE L1 -1737 5986 3944 6126 191 21 66 chr2 124679638 124681006 -126006848 - L1MA2 LINE L1 -6243 1322 16 198 331 24 65 chr2 124681863 124681987 -126005867 + MIR3 SINE MIR 5 123 -85 180 0 0 0 chr2 124682472 124682492 -126005362 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2030 125 0 10 chr2 124682495 124682792 -126005062 - AluSx SINE Alu -18 294 1 259 267 82 75 chr2 124683277 124683423 -126004431 + MIR SINE MIR 51 197 -65 32 0 0 0 chr2 124683425 124683457 -126004397 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr2 124683833 124683855 -126003999 + AT_rich Low_complexity Low_complexity 1 22 0 209 244 32 41 chr2 124684230 124684275 -126003579 + (TA)n Simple_repeat Simple_repeat 2 46 -77 1364 207 21 21 chr2 124684275 124684565 -126003289 + AluJo SINE Alu 1 290 -22 209 244 32 41 chr2 124684565 124684642 -126003212 + (TA)n Simple_repeat Simple_repeat 46 123 0 211 325 12 25 chr2 124684735 124684815 -126003039 - MIR SINE MIR -157 105 27 184 143 0 41 chr2 124685755 124685804 -126002050 + (ATG)n Simple_repeat Simple_repeat 1 47 0 22 0 0 0 chr2 124686780 124686802 -126001052 + AT_rich Low_complexity Low_complexity 1 22 0 183 346 26 26 chr2 124687633 124687711 -126000143 + MER5A DNA MER1_type 23 100 -89 1663 146 19 0 chr2 124688375 124688635 -125999219 + AluSx SINE Alu 1 265 -47 23 54 0 0 chr2 124689160 124689197 -125998657 + AT_rich Low_complexity Low_complexity 1 37 0 220 346 0 0 chr2 124689244 124689322 -125998532 + (TG)n Simple_repeat Simple_repeat 1 78 0 198 379 11 32 chr2 124690545 124690640 -125997214 + MIR3 SINE MIR 5 97 -111 964 184 61 42 chr2 124690644 124690954 -125996900 - MER33 DNA MER1_type -4 320 5 304 341 100 36 chr2 124691245 124691465 -125996389 + L3 LINE CR1 1113 1346 -231 239 306 24 12 chr2 124691525 124691610 -125996244 - L2 LINE L2 -3 3269 3184 23 0 0 0 chr2 124691614 124691637 -125996217 + AT_rich Low_complexity Low_complexity 1 23 0 517 311 31 11 chr2 124692568 124692828 -125995026 - L1MDa LINE L1 -4380 2160 1896 961 77 0 44 chr2 124692837 124693020 -125994834 + (TA)n Simple_repeat Simple_repeat 1 175 0 630 101 0 85 chr2 124693044 124693423 -125994431 + (TA)n Simple_repeat Simple_repeat 1 346 0 236 92 0 92 chr2 124693470 124693535 -125994319 + L1MCa LINE L1 2006 2064 -4362 485 134 5 119 chr2 124693535 124693737 -125994117 + (TA)n Simple_repeat Simple_repeat 1 179 0 397 276 76 16 chr2 124693738 124693923 -125993931 - L1MDa LINE L1 -4660 1880 1685 227 108 0 92 chr2 124694115 124694180 -125993674 + L1MCa LINE L1 2006 2064 -4362 485 134 5 119 chr2 124694180 124694382 -125993472 + (TA)n Simple_repeat Simple_repeat 2 180 0 2486 299 88 25 chr2 124694382 124696040 -125991814 - L1MDb LINE L1 -4661 1745 16 30 27 0 0 chr2 124696507 124696544 -125991310 + AT_rich Low_complexity Low_complexity 1 37 0 420 216 157 8 chr2 124697705 124697839 -125990015 - L1MC3 LINE L1 -639 7146 6993 1270 187 80 23 chr2 124697845 124698144 -125989710 - L1MC3 LINE L1 -833 6952 6637 432 55 0 0 chr2 124698145 124698200 -125989654 + (TG)n Simple_repeat Simple_repeat 2 56 0 1344 233 29 9 chr2 124698208 124698584 -125989270 + MLT1D LTR MaLR 86 505 0 3278 287 96 21 chr2 124698596 124699268 -125988586 - L1MC3 LINE L1 -817 5329 5712 1994 120 20 3 chr2 124699268 124699569 -125988285 - AluSp SINE Alu -7 306 1 3278 287 96 21 chr2 124699569 124700375 -125987479 - L1MC3 LINE L1 -433 5713 4969 1002 201 5 5 chr2 124700364 124700578 -125987276 + L1MB3 LINE L1 5930 6143 -40 * 2168 71 0 74 chr2 124700575 124700901 -125986953 - L1PA8 LINE L1 -429 5743 5442 1467 76 5 0 chr2 124700892 124701089 -125986765 + L1PA8 LINE L1 5760 5957 -215 * 2911 91 2 0 chr2 124700901 124701286 -125986568 + L1PA8 LINE L1 5760 6154 -18 251 182 0 0 chr2 124701293 124701348 -125986506 + L1MB4 LINE L1 6126 6180 0 1905 234 82 14 chr2 124701353 124701531 -125986323 - L1M4 LINE L1 -1115 5031 4866 1369 218 7 20 chr2 124701531 124701825 -125986029 + AluJo SINE Alu 1 290 -22 1905 234 82 14 chr2 124701825 124702267 -125985587 - L1M4 LINE L1 -1280 4866 4369 1413 201 16 4 chr2 124702285 124702529 -125985325 + AluSx SINE Alu 1 247 -65 17531 196 41 11 chr2 124702708 124704393 -125983461 + L1M1 LINE L1 15 1648 -5917 396 0 0 0 chr2 124704393 124704437 -125983417 + (GA)n Simple_repeat Simple_repeat 2 45 0 17531 196 41 11 chr2 124704437 124705080 -125982774 + L1M1 LINE L1 1648 2270 -5295 1582 206 0 34 chr2 124705080 124705400 -125982454 + AluJb SINE Alu 3 311 -1 17531 196 41 11 chr2 124705400 124707333 -125980521 + L1M1 LINE L1 2270 4480 -3085 2108 140 34 28 chr2 124707345 124707703 -125980151 - THE1B LTR MaLR -4 360 1 9951 130 15 30 chr2 124707703 124709307 -125978547 - THE1B-int LTR MaLR 0 1580 1 1874 184 23 15 chr2 124709307 124709650 -125978204 - THE1B LTR MaLR 0 364 19 1785 215 41 4 chr2 124709754 124710219 -125977635 + L1M1 LINE L1 4558 5039 -2526 * 2459 169 20 33 chr2 124710209 124710749 -125977105 + L1M1 LINE L1 5294 5826 -1739 309 177 0 0 chr2 124710801 124710880 -125976974 + (TA)n Simple_repeat Simple_repeat 1 79 0 241 225 56 0 chr2 124710881 124710952 -125976902 - L1MC/D LINE L1 -771 5471 5397 8576 215 94 16 chr2 124710955 124712054 -125975800 - L1PBa LINE L1 -887 6697 5685 180 0 0 0 chr2 124712054 124712074 -125975780 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8576 215 94 16 chr2 124712074 124715027 -125972827 - L1PBa LINE L1 -1899 5685 2033 3492 174 78 27 chr2 124715029 124715595 -125972259 - L1PBa LINE L1 -5704 1881 1217 2815 28 0 0 chr2 124715595 124715912 -125971942 - AluYb8 SINE Alu -1 317 1 3492 174 78 27 chr2 124715912 124716154 -125971700 - L1PBa LINE L1 -6368 1217 989 424 323 30 17 chr2 124716152 124716384 -125971470 - L1PBa LINE L1 -7341 240 6 * 2305 263 105 21 chr2 124716492 124717984 -125969870 - L1MDa LINE L1 -2452 4088 2462 651 298 19 0 chr2 124718206 124718471 -125969383 - L1MDa LINE L1 -4380 2160 1891 409 85 0 49 chr2 124718475 124718557 -125969297 + (TA)n Simple_repeat Simple_repeat 1 78 0 2126 175 164 4 chr2 124718662 124719094 -125968760 - L1PA16 LINE L1 -176 5990 5480 180 0 0 0 chr2 124719094 124719114 -125968740 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2126 175 164 4 chr2 124719114 124719139 -125968715 - L1PA16 LINE L1 -686 5480 5460 * 12034 158 29 117 chr2 124719138 124722250 -125965604 + L1P LINE L1 3 2841 -3305 2335 89 0 3 chr2 124722250 124722543 -125965311 + AluY SINE Alu 1 292 -19 2392 85 0 0 chr2 124723609 124723904 -125963950 + AluY SINE Alu 10 304 -7 8130 126 44 27 chr2 124723904 124725334 -125962520 + L1P LINE L1 2833 4286 -1860 606 93 12 0 chr2 124725358 124725444 -125962410 - Tigger1 DNA MER2_type -1464 954 868 353 178 0 41 chr2 124725449 124725476 -125962378 - L1M2 LINE L1 -482 5809 5782 252 0 0 0 chr2 124725476 124725504 -125962350 + (TA)n Simple_repeat Simple_repeat 2 29 0 353 178 0 41 chr2 124725504 124725564 -125962290 - L1M2 LINE L1 -509 5782 5725 251 51 0 0 chr2 124725558 124725597 -125962257 - L1PA6 LINE L1 -1 6153 6115 * 4443 175 51 1 chr2 124725597 124726433 -125961421 - Tigger1 DNA MER2_type -1536 882 5 600 292 68 41 chr2 124726446 124726812 -125961042 - L1M4c LINE L1 -4140 2998 2623 2512 293 68 47 chr2 124726887 124729313 -125958541 - L1M4c LINE L1 -4475 2663 20 793 247 14 107 chr2 124729334 124729747 -125958107 - L1MCb LINE L1 -2229 4335 3961 949 276 27 55 chr2 124729788 124730338 -125957516 - L1MCb LINE L1 -3373 3191 2657 1886 142 0 0 chr2 124730487 124730755 -125957099 + AluSx SINE Alu 1 268 -44 1001 281 133 9 chr2 124730805 124731240 -125956614 - L1MCb LINE L1 -5189 856 368 10639 21 3 1 chr2 124731249 124732515 -125955339 - L1P LINE L1 -754 5392 4124 1992 25 25 0 chr2 124732515 124732788 -125955066 + L1PA3 LINE L1 5905 6185 0 284 226 24 57 chr2 124733003 124733127 -125954727 + L1MC5 LINE L1 7812 7931 -30 750 304 11 23 chr2 124733132 124733392 -125954462 - L1MCb LINE L1 -5680 365 109 1403 169 0 9 chr2 124734380 124734611 -125953243 + MER30 DNA MER1_type 2 230 0 192 409 0 0 chr2 124735746 124735834 -125952020 + MIR SINE MIR 47 134 -128 2165 127 48 20 chr2 124736200 124736554 -125951300 - THE1B LTR MaLR 0 364 1 2070 123 33 3 chr2 124737012 124737313 -125950541 + AluSx SINE Alu 1 310 -2 534 204 26 0 chr2 124737618 124737731 -125950123 + MLT1B LTR MaLR 270 385 -5 1957 105 4 0 chr2 124738264 124738521 -125949333 + AluSp SINE Alu 1 258 -55 2192 184 11 9 chr2 124739063 124739513 -125948341 + L1MA3 LINE L1 5854 6304 -1 23 0 0 0 chr2 124739800 124739823 -125948031 + AT_rich Low_complexity Low_complexity 1 23 0 1564 306 180 23 chr2 124740803 124741541 -125946313 - L2 LINE L2 0 3313 2692 801 277 33 76 chr2 124741541 124741964 -125945890 + MLT1I LTR MaLR 5 409 0 1564 306 180 23 chr2 124741964 124742446 -125945408 - L2 LINE L2 -621 2692 1897 732 220 64 17 chr2 124742502 124742701 -125945153 - MSTD LTR MaLR -172 193 3 500 341 89 19 chr2 124742702 124743027 -125944827 - L2 LINE L2 -2108 1206 859 553 260 125 20 chr2 124744279 124744575 -125943279 - L1ME3A LINE L1 -184 5986 5660 1264 150 157 29 chr2 124744592 124744872 -125942982 + Tigger2a DNA MER2_type 1 316 -118 24 32 0 0 chr2 124744872 124744903 -125942951 + AT_rich Low_complexity Low_complexity 1 31 0 2331 65 0 32 chr2 124744964 124745272 -125942582 + AluY SINE Alu 1 298 -13 253 281 0 0 chr2 124745288 124745345 -125942509 - L1ME3A LINE L1 -616 5548 5492 417 296 126 29 chr2 124745383 124745767 -125942087 - L1ME3A LINE L1 -743 5403 4937 2026 220 48 20 chr2 124745767 124746272 -125941582 - LTR53 LTR ERVL 0 519 1 417 296 126 29 chr2 124746272 124746499 -125941355 - L1ME3A LINE L1 -1209 4937 4733 1718 264 121 29 chr2 124746510 124747582 -125940272 - L1M4 LINE L1 -1207 4939 3769 297 317 17 6 chr2 124748023 124748203 -125939651 + L1MB4 LINE L1 5721 5902 -278 * 1526 37 5 0 chr2 124748059 124748246 -125939608 + L1PA4 LINE L1 5760 5947 -208 484 57 89 0 chr2 124748350 124748473 -125939381 + (TA)n Simple_repeat Simple_repeat 1 134 0 1052 252 48 42 chr2 124748473 124749185 -125938669 - L1MC/D LINE L1 -743 5403 4750 621 259 81 40 chr2 124749220 124749517 -125938337 - L1M4 LINE L1 -1278 4868 4560 325 165 64 37 chr2 124749513 124749622 -125938232 - L1M4 LINE L1 -1074 5072 4961 * 643 266 62 57 chr2 124749622 124750028 -125937826 - L1M4 LINE L1 -1588 4558 4151 261 0 0 0 chr2 124750028 124750057 -125937797 + (T)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr2 124750275 124750298 -125937556 + AT_rich Low_complexity Low_complexity 1 23 0 386 81 16 0 chr2 124750467 124750529 -125937325 + L1PA4 LINE L1 6093 6155 0 628 361 72 33 chr2 124750841 124751616 -125936238 + HERV16 LTR ERVL 1293 2074 -2922 279 311 53 77 chr2 124752141 124752350 -125935504 - LTR16C LTR ERVL -13 478 275 303 364 159 17 chr2 124754730 124755139 -125932715 - L2 LINE L2 -25 3288 2822 184 235 15 44 chr2 124756358 124756426 -125931428 - MER5B DNA MER1_type -112 66 1 714 240 156 62 chr2 124756700 124757237 -125930617 + MER69 DNA AcHobo 1938 2525 -1 267 152 0 0 chr2 124758841 124758887 -125928967 + CT-rich Low_complexity Low_complexity 3 48 0 305 252 19 56 chr2 124759003 124759110 -125928744 - MIR SINE MIR -37 225 123 395 296 35 75 chr2 124759113 124759484 -125928370 + L1MEc LINE L1 777 1132 -5431 327 285 93 6 chr2 124760124 124760296 -125927558 - L1ME3 LINE L1 -21 6141 5955 301 274 75 27 chr2 124760640 124760786 -125927068 - L1MCa LINE L1 -5006 1420 1268 244 267 89 22 chr2 124760841 124760931 -125926923 - L1MCa LINE L1 -5096 1333 1238 1675 296 48 6 chr2 124760963 124761636 -125926218 + L1MEc LINE L1 1092 1792 -4592 24 32 0 0 chr2 124761708 124761739 -125926115 + AT_rich Low_complexity Low_complexity 1 31 0 250 128 35 70 chr2 124761978 124762064 -125925790 + (TATAA)n Simple_repeat Simple_repeat 3 85 0 2135 229 61 18 chr2 124762211 124762425 -125925429 + L1MEc LINE L1 2368 2571 -3811 1054 248 14 77 chr2 124762425 124762841 -125925013 + MLT1B LTR MaLR 1 390 0 2135 229 61 18 chr2 124762841 124763286 -125924568 + L1MEc LINE L1 2571 3055 -3327 270 0 0 0 chr2 124763699 124763729 -125924125 + (CA)n Simple_repeat Simple_repeat 2 31 0 1924 122 33 7 chr2 124764859 124765163 -125922691 + AluSx SINE Alu 1 312 0 1588 196 42 98 chr2 124765400 124765972 -125921882 + MER67A LTR ERV1 4 543 0 311 284 104 57 chr2 124766014 124766284 -125921570 + MLT1J LTR MaLR 237 601 -14 237 98 0 0 chr2 124766845 124766886 -125920968 + (GA)n Simple_repeat Simple_repeat 2 42 0 1860 161 14 0 chr2 124766886 124767178 -125920676 - AluSx SINE Alu -13 299 4 22 0 0 0 chr2 124767181 124767203 -125920651 + AT_rich Low_complexity Low_complexity 1 22 0 2102 103 0 3 chr2 124768122 124768426 -125919428 - AluSx SINE Alu 0 303 1 201 74 0 0 chr2 124769289 124769316 -125918538 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 231 325 40 63 chr2 124770004 124770130 -125917724 - L2 LINE L2 -27 3245 3123 367 226 47 19 chr2 124770228 124770334 -125917520 - MIR SINE MIR -44 218 110 2072 115 30 3 chr2 124770851 124771155 -125916699 + AluSq SINE Alu 1 312 -1 886 239 5 10 chr2 124771518 124771723 -125916131 - L1PB4 LINE L1 -1 6155 5952 310 354 18 0 chr2 124771725 124771838 -125916016 - L1ME LINE L1 -401 5720 5606 333 265 25 25 chr2 124772567 124772729 -125915125 + HAL1 LINE L1 859 1020 -1487 198 246 131 103 chr2 124773071 124773246 -125914608 - L2 LINE L2 -8 3305 3126 25 31 0 0 chr2 124773593 124773625 -125914229 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr2 124774119 124774149 -125913705 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 124774197 124774218 -125913636 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 124774281 124774302 -125913552 + AT_rich Low_complexity Low_complexity 1 21 0 30 100 0 0 chr2 124774423 124774523 -125913331 + AT_rich Low_complexity Low_complexity 1 100 0 713 305 119 21 chr2 124774523 124775189 -125912665 - L1ME3 LINE L1 -303 5859 5119 1485 265 116 37 chr2 124775259 124776067 -125911787 + L1M4 LINE L1 603 1474 -5068 * 5869 265 84 12 chr2 124776064 124778707 -125909147 + L1M4 LINE L1 2608 5439 -1205 244 118 0 0 chr2 124778717 124778751 -125909103 - MER76 LTR ERV -597 91 58 338 299 66 30 chr2 124778756 124779030 -125908824 - L1MCa LINE L1 -4850 1576 1157 196 250 25 75 chr2 124780774 124780854 -125907000 - L2 LINE L2 -11 3261 3186 650 35 12 0 chr2 124781091 124781176 -125906678 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 1416 229 59 39 chr2 124781414 124781802 -125906052 + MSTD LTR MaLR 1 396 0 394 372 44 40 chr2 124782012 124782286 -125905568 + L2 LINE L2 2804 3078 -194 354 357 14 0 chr2 124783687 124783827 -125904027 + MIR SINE MIR 120 261 -1 678 125 34 1 chr2 124783834 124783961 -125903893 + L1PA7 LINE L1 3472 3610 -2536 5177 26 0 0 chr2 124783961 124784563 -125903291 + L1PA4 LINE L1 5546 6148 -7 * 11827 102 13 55 chr2 124784554 124787166 -125900688 + L1PA7 LINE L1 3603 6154 0 1141 186 20 122 chr2 124787753 124788156 -125899698 - MLT1A1 LTR MaLR 0 365 4 4029 180 38 11 chr2 124788382 124789020 -125898834 + L1MA5 LINE L1 4828 5447 -853 6732 66 10 1 chr2 124789020 124790199 -125897655 + L1PA7 LINE L1 4987 6173 0 4029 180 38 11 chr2 124790199 124790813 -125897041 + L1MA5 LINE L1 5447 6115 -185 238 278 22 33 chr2 124790845 124790935 -125896919 + L2 LINE L2 3184 3272 0 180 0 0 0 chr2 124791611 124791631 -125896223 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 317 166 0 41 chr2 124792267 124792515 -125895339 + (TAAA)n Simple_repeat Simple_repeat 1 237 0 306 240 133 78 chr2 124792592 124792863 -125894991 + L1ME4a LINE L1 5832 6117 -4 21 36 0 0 chr2 124793365 124793393 -125894461 + AT_rich Low_complexity Low_complexity 1 28 0 246 300 50 42 chr2 124793396 124793516 -125894338 + L3 LINE CR1 1380 1500 -77 1274 233 86 25 chr2 124794069 124794476 -125893378 - MSTB1 LTR MaLR 0 432 1 250 317 163 0 chr2 124795123 124795246 -125892608 + MIR SINE MIR 106 248 -14 29 0 0 0 chr2 124797243 124797272 -125890582 + AT_rich Low_complexity Low_complexity 1 29 0 4773 242 39 4 chr2 124800470 124801792 -125886062 - L1MB1 LINE L1 -2303 3843 2476 3796 215 55 34 chr2 124801797 124803278 -125884576 + L1MB1 LINE L1 3834 5352 -816 1640 214 34 18 chr2 124803278 124803666 -125884188 + MSTD LTR MaLR 1 394 -2 3796 215 55 34 chr2 124803666 124804111 -125883743 + L1MB1 LINE L1 5352 5786 -382 226 109 25 67 chr2 124804112 124804231 -125883623 + (TA)n Simple_repeat Simple_repeat 2 115 0 1390 175 31 70 chr2 124804231 124804251 -125883603 + L1MB1 LINE L1 5799 5818 -350 1632 179 23 52 chr2 124804251 124804598 -125883256 + MER1B DNA MER1_type 1 337 0 1390 175 31 70 chr2 124804598 124804932 -125882922 + L1MB1 LINE L1 5818 6139 -29 1110 256 29 19 chr2 124804983 124805296 -125882558 + L1M3 LINE L1 5398 5713 -470 228 260 40 72 chr2 124805506 124805756 -125882098 + L1M4 LINE L1 3401 3642 -2504 580 333 28 45 chr2 124805804 124806161 -125881693 + L1M4c LINE L1 31 381 -6003 2741 256 80 29 chr2 124806277 124807716 -125880138 + L1M4c LINE L1 575 2172 -4212 1874 241 17 27 chr2 124807754 124808235 -125879619 + L1MCa LINE L1 46 521 -5905 9982 236 46 53 chr2 124808246 124815989 -125871865 + L1ME2 LINE L1 5 7489 -113 2164 158 25 35 chr2 124815989 124816393 -125871461 + Tigger2a DNA MER2_type 1 400 -34 699 223 0 0 chr2 124816451 124816590 -125871264 + FRAM SINE Alu 1 137 -39 522 209 0 20 chr2 124816593 124816741 -125871113 + GA-rich Low_complexity Low_complexity 4 148 0 296 241 52 35 chr2 124817240 124817356 -125870498 + L2 LINE L2 2423 2540 -774 748 308 36 4 chr2 124817522 124817775 -125870079 + MIR SINE MIR 2 262 0 874 319 0 4 chr2 124818455 124818703 -125869151 + MIR SINE MIR 6 252 -10 2275 178 44 23 chr2 124818794 124818917 -125868937 - L1MB4 LINE L1 -1 6179 6060 2229 118 0 0 chr2 124818917 124819223 -125868631 - AluSq SINE Alu -7 306 1 2275 178 44 23 chr2 124819223 124819617 -125868237 - L1MB4 LINE L1 -120 6060 5651 189 0 0 0 chr2 124821147 124821168 -125866686 + (TG)n Simple_repeat Simple_repeat 2 22 0 221 212 8 38 chr2 124821190 124821322 -125866532 + (TA)n Simple_repeat Simple_repeat 2 129 0 227 151 0 38 chr2 124821322 124821375 -125866479 - LTR66 LTR ERVL -171 439 389 288 137 0 0 chr2 124821981 124822032 -125865822 + (TG)n Simple_repeat Simple_repeat 2 52 0 3020 263 34 8 chr2 124822686 124823660 -125864194 + L1MB7 LINE L1 4134 5132 -1014 1219 126 0 0 chr2 124823668 124823843 -125864011 - AluSg/x SINE Alu -1 311 137 3638 210 32 21 chr2 124823851 124824184 -125863670 + L1MB7 LINE L1 5144 5472 -712 198 103 0 0 chr2 124824184 124824213 -125863641 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 198 0 0 0 chr2 124824214 124824236 -125863618 + (CCA)n Simple_repeat Simple_repeat 1 22 0 3638 210 32 21 chr2 124824236 124824894 -125862960 + L1MB7 LINE L1 5471 6150 -34 2094 153 93 5 chr2 124826712 124827099 -125860755 + MSTA LTR MaLR 1 421 -7 291 344 39 35 chr2 124827191 124827447 -125860407 + MIR SINE MIR 2 258 -4 2896 255 83 24 chr2 124827850 124829581 -125858273 - L1MD1 LINE L1 0 6660 4826 * 3138 245 77 39 chr2 124829578 124830594 -125857260 - L1MD1 LINE L1 -4188 2376 1400 2281 100 3 0 chr2 124830594 124830894 -125856960 - AluSp SINE Alu -12 301 1 3138 245 77 39 chr2 124830894 124832069 -125855785 - L1MD1 LINE L1 -5164 1400 7 198 0 0 0 chr2 124832113 124832135 -125855719 + (TC)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr2 124832135 124832156 -125855698 + AT_rich Low_complexity Low_complexity 1 21 0 515 70 101 0 chr2 124832168 124832326 -125855528 + (TA)n Simple_repeat Simple_repeat 1 174 0 609 70 70 16 chr2 124832352 124832599 -125855255 + (TA)n Simple_repeat Simple_repeat 1 260 0 261 0 0 0 chr2 124833229 124833258 -125854596 + (T)n Simple_repeat Simple_repeat 1 29 0 1533 231 49 59 chr2 124833258 124833850 -125854004 - L1M4 LINE L1 -1979 4167 3582 659 311 63 21 chr2 124833856 124834142 -125853712 - MLT1D LTR MaLR -82 423 126 2069 230 46 115 chr2 124834142 124835035 -125852819 - MLT1D-int LTR MaLR -526 845 15 1349 223 37 76 chr2 124835047 124835558 -125852296 - MLT1D LTR MaLR 0 505 15 293 0 27 0 chr2 124835771 124835808 -125852046 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 731 220 43 0 chr2 124837275 124837416 -125850438 - Tigger7 DNA MER2_type -558 147 1 21 0 0 0 chr2 124837551 124837572 -125850282 + AT_rich Low_complexity Low_complexity 1 21 0 231 211 18 18 chr2 124838370 124838427 -125849427 + (CA)n Simple_repeat Simple_repeat 2 58 0 670 150 0 0 chr2 124838527 124838627 -125849227 + AluS SINE Alu 1 100 -213 7288 41 2 0 chr2 124839075 124839995 -125847859 - L1P LINE L1 -3212 2934 2013 4797 55 11 0 chr2 124839982 124840620 -125847234 + L1P LINE L1 2964 3608 -2538 * 313 210 49 12 chr2 124840749 124840830 -125847024 - Tigger5 DNA MER2_type -3 2320 2237 4569 156 1 10 chr2 124840830 124841607 -125846247 + L1PA15 LINE L1 5395 6164 -1 312 208 28 14 chr2 124841672 124841744 -125846110 - Tigger5 DNA MER2_type 0 2323 2251 226 235 20 0 chr2 124841716 124841767 -125846087 - Tigger5 DNA MER2_type -2270 53 2 * 385 235 12 0 chr2 124841768 124841849 -125846005 + Tigger7 DNA MER2_type 2409 2490 -1 845 248 78 111 chr2 124841991 124842414 -125845440 - MLT2B1 LTR ERVL 0 414 6 2092 222 19 2 chr2 124843087 124843502 -125844352 + Tigger7 DNA MER2_type 1 422 -2065 893 193 56 0 chr2 124843523 124843720 -125844134 + Tigger7 DNA MER2_type 2280 2487 -4 292 314 34 53 chr2 124844160 124844321 -125843533 - MIR SINE MIR -69 139 9 345 172 0 0 chr2 124844529 124844593 -125843261 + A-rich Low_complexity Low_complexity 1 64 0 286 275 37 28 chr2 124845850 124845959 -125841895 + MIR SINE MIR 86 195 -67 25 0 0 0 chr2 124846058 124846083 -125841771 + AT_rich Low_complexity Low_complexity 1 25 0 320 353 63 42 chr2 124847261 124847480 -125840374 - MIR SINE MIR -5 257 31 2572 43 0 0 chr2 124847480 124847780 -125840074 - AluY SINE Alu -11 300 1 320 353 63 42 chr2 124847780 124847798 -125840056 - MIR SINE MIR -231 31 15 292 233 82 107 chr2 124849775 124849934 -125837920 + MIR SINE MIR 53 207 -55 670 244 107 86 chr2 124850088 124850563 -125837291 - LTR41 LTR ERVL -6 767 283 * 861 201 23 0 chr2 124850552 124850726 -125837128 - LTR41 LTR ERVL -592 181 4 21 0 0 0 chr2 124850749 124850770 -125837084 + AT_rich Low_complexity Low_complexity 1 21 0 207 297 14 27 chr2 124851021 124851169 -125836685 + (TA)n Simple_repeat Simple_repeat 1 146 0 237 91 0 0 chr2 124852076 124852120 -125835734 + Alu SINE Alu 265 308 0 1747 160 127 33 chr2 124852742 124853161 -125834693 + L1MA8 LINE L1 5733 6190 -101 1285 32 7 0 chr2 124853196 124853351 -125834503 - L1PA5 LINE L1 -7 6147 5992 588 143 9 0 chr2 124853352 124853457 -125834397 + L1MA8 LINE L1 6178 6283 -8 429 258 60 109 chr2 124853567 124853815 -125834039 + HAL1 LINE L1 997 1232 -1275 1802 166 3 45 chr2 124853874 124854187 -125833667 - AluSx SINE Alu -12 300 1 639 238 43 12 chr2 124854191 124854355 -125833499 + MLT1G1 LTR MaLR 9 177 -418 12932 197 70 17 chr2 124854426 124857567 -125830287 + L1PA5 LINE L1 2 2974 -3888 12279 45 1 0 chr2 124857567 124859854 -125828000 + L1PA5 LINE L1 4580 6867 -3 12932 197 70 17 chr2 124859854 124860330 -125827524 + L1PA5 LINE L1 2974 3423 -3439 2436 68 16 3 chr2 124860330 124860637 -125827217 + AluY SINE Alu 1 311 0 12932 197 70 17 chr2 124860637 124861130 -125826724 + L1PA5 LINE L1 3423 3888 -2974 2133 115 0 0 chr2 124861130 124861408 -125826446 + AluSg SINE Alu 1 278 -32 387 105 0 0 chr2 124861408 124861465 -125826389 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 12932 197 70 17 chr2 124861465 124862866 -125824988 + L1PA5 LINE L1 3887 5806 -1056 1339 119 0 0 chr2 124862876 124863085 -125824769 + AluSg/x SINE Alu 106 314 0 199 53 26 26 chr2 124863204 124863242 -125824612 + (TAA)n Simple_repeat Simple_repeat 2 39 0 504 199 14 31 chr2 124865047 124865288 -125822566 + CT-rich Low_complexity Low_complexity 2 282 0 2068 136 32 26 chr2 124865288 124865627 -125822227 - THE1B LTR MaLR 0 364 24 21088 120 15 39 chr2 124865628 124867568 -125820286 + L1P3 LINE L1 3 1987 -4474 1988 116 37 3 chr2 124867568 124867862 -125819992 + AluSp SINE Alu 1 304 -9 21088 120 15 39 chr2 124867862 124870294 -125817560 + L1P3 LINE L1 1987 4376 -2085 961 117 7 0 chr2 124870294 124870423 -125817431 + L1PA7 LINE L1 6007 6152 -2 261 91 0 0 chr2 124870425 124870458 -125817396 - THE1B LTR MaLR -331 33 1 188 143 24 0 chr2 124870484 124870526 -125817328 + CT-rich Low_complexity Low_complexity 2 44 0 267 133 0 0 chr2 124870832 124870877 -125816977 + (CA)n Simple_repeat Simple_repeat 2 46 0 237 254 15 0 chr2 124870989 124871056 -125816798 + MIR SINE MIR 185 252 -10 518 345 25 0 chr2 124871093 124871293 -125816561 - MIR SINE MIR -56 206 2 243 245 63 0 chr2 124871737 124871830 -125816024 - MIR SINE MIR -63 145 53 497 281 8 0 chr2 124872202 124872323 -125815531 + MER5A DNA MER1_type 5 126 -63 721 176 20 20 chr2 124872324 124872477 -125815377 + MER34 LTR ERV1 311 463 -79 217 273 0 0 chr2 124872484 124872528 -125815326 + MER5A DNA MER1_type 146 189 0 1242 242 19 7 chr2 124872536 124872846 -125815008 - MER58B DNA MER1_type 0 341 28 417 264 144 24 chr2 124872921 124873088 -125814766 + MIR SINE MIR 59 245 -17 203 222 88 0 chr2 124873894 124873960 -125813894 + MIR SINE MIR 70 141 -67 327 214 136 10 chr2 124874038 124874141 -125813713 - MER63A DNA MER1_type -8 202 87 186 103 0 0 chr2 124874187 124874216 -125813638 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 268 100 25 0 chr2 124875245 124875285 -125812569 - L3 LINE CR1 -112 1465 1425 879 223 66 66 chr2 124875308 124875658 -125812196 - L1MA9 LINE L1 -3 6309 5960 485 162 2 12 chr2 124876286 124876379 -125811475 + L1M3 LINE L1 5598 5679 -492 652 146 0 32 chr2 124876380 124876565 -125811289 + (TA)n Simple_repeat Simple_repeat 2 180 0 299 334 71 27 chr2 124876570 124876935 -125810919 + L1PA11 LINE L1 5638 6018 -156 * 2067 196 14 5 chr2 124876608 124877027 -125810827 + L1MB3 LINE L1 5681 6103 -80 1880 110 37 7 chr2 124877075 124877374 -125810480 - AluSq SINE Alu -5 308 1 25 0 0 0 chr2 124878160 124878185 -125809669 + AT_rich Low_complexity Low_complexity 1 25 0 846 248 14 9 chr2 124878602 124878820 -125809034 - MER58B DNA MER1_type -19 322 104 183 162 0 0 chr2 124879159 124879196 -125808658 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 27 0 0 0 chr2 124879352 124879379 -125808475 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr2 124880461 124880483 -125807371 + AT_rich Low_complexity Low_complexity 1 22 0 207 114 0 0 chr2 124880506 124880541 -125807313 + (A)n Simple_repeat Simple_repeat 1 35 0 2828 10 0 0 chr2 124880945 124881253 -125806601 - AluYa5 SINE Alu -3 308 1 1514 161 28 83 chr2 124881321 124881682 -125806172 + MER61A LTR ERV1 1 341 -2 22 80 0 0 chr2 124881959 124882009 -125805845 + AT_rich Low_complexity Low_complexity 1 50 0 1271 256 87 14 chr2 124882183 124882990 -125804864 + L1MD1 LINE L1 1035 1954 -4586 1869 159 3 16 chr2 124883010 124883324 -125804530 + AluSx SINE Alu 1 310 -2 1957 132 21 1 chr2 124883340 124883370 -125804484 - L1PA11 LINE L1 -258 5896 5868 1443 162 13 76 chr2 124883370 124883672 -125804182 + AluJb SINE Alu 5 287 -15 1957 132 21 1 chr2 124883672 124883969 -125803885 - L1PA11 LINE L1 -286 5868 5563 2016 117 23 0 chr2 124883969 124884273 -125803581 + L1PA11 LINE L1 5858 6171 -3 421 248 32 25 chr2 124884371 124884528 -125803326 + L1MD1 LINE L1 2017 2174 -4366 2713 163 65 79 chr2 124884724 124885225 -125802629 + LTR8A LTR ERV1 1 492 -235 1510 160 126 0 chr2 124885225 124885488 -125802366 - AluJb SINE Alu -14 298 3 2713 163 65 79 chr2 124885488 124885673 -125802181 + LTR8A LTR ERV1 492 678 -49 386 221 0 0 chr2 124885702 124885779 -125802075 - MER6B DNA MER2_type -198 78 2 1696 267 116 32 chr2 124885788 124885931 -125801923 + L1MD1 LINE L1 2312 2442 -4098 928 42 17 0 chr2 124885931 124886050 -125801804 + L1PA4 LINE L1 6034 6154 -1 1696 267 116 32 chr2 124886050 124887447 -125800407 + L1MD1 LINE L1 2442 4049 -2491 1707 214 128 67 chr2 124887452 124888108 -125799746 - MER39 LTR ERV1 -11 642 4 214 65 32 0 chr2 124888143 124888174 -125799680 + (GAAA)n Simple_repeat Simple_repeat 4 35 0 987 162 10 3 chr2 124888177 124888478 -125799376 + GA-rich Low_complexity Low_complexity 1 304 0 1955 250 99 73 chr2 124888478 124890862 -125796992 + L1MD1 LINE L1 4083 6613 -23 190 120 0 40 chr2 124891063 124891113 -125796741 + (TAA)n Simple_repeat Simple_repeat 2 49 0 296 305 19 29 chr2 124891141 124891246 -125796608 - MIR SINE MIR -71 191 88 3591 128 6 0 chr2 124891483 124892031 -125795823 - L1PA13 LINE L1 -8 6155 5605 1542 219 27 9 chr2 124893561 124893899 -125793955 - MER4D LTR ERV1 -11 892 549 371 167 0 0 chr2 124893929 124893995 -125793859 - MER49 LTR ERV1 -638 285 220 269 296 12 0 chr2 124895381 124895462 -125792392 - L2 LINE L2 -1039 2275 2194 5785 41 1 0 chr2 124896493 124897219 -125790635 - L1P LINE L1 -3393 2753 2027 19394 42 0 0 chr2 124897219 124900425 -125787429 + L1PA4 LINE L1 2964 6180 0 206 289 79 13 chr2 124901177 124901253 -125786601 + MIR SINE MIR 7 87 -175 560 199 118 0 chr2 124901288 124901449 -125786405 + L1MD2 LINE L1 6163 6342 -17 474 246 37 68 chr2 124901614 124901805 -125786049 - MIR SINE MIR 0 262 78 215 283 0 0 chr2 124902202 124902262 -125785592 + MIR SINE MIR 31 90 -172 474 298 58 16 chr2 124902446 124902688 -125785166 + LTR16A LTR ERVL 19 270 -180 283 285 134 32 chr2 124903124 124903202 -125784652 - L1ME3A LINE L1 -275 5895 5826 25 0 0 0 chr2 124903202 124903227 -125784627 + AT_rich Low_complexity Low_complexity 1 25 0 1972 88 0 32 chr2 124903228 124903512 -125784342 - L1PA7 LINE L1 -2 6152 5878 283 285 134 32 chr2 124903512 124903660 -125784194 - L1ME3A LINE L1 -343 5827 5617 311 244 244 8 chr2 124904179 124904302 -125783552 - L1 LINE L1 -2448 3698 3547 217 177 81 32 chr2 124904448 124904510 -125783344 - L2 LINE L2 0 3313 3249 21 0 0 0 chr2 124905634 124905655 -125782199 + AT_rich Low_complexity Low_complexity 1 21 0 36 0 0 0 chr2 124905681 124905717 -125782137 + AT_rich Low_complexity Low_complexity 1 36 0 24 77 0 0 chr2 124906442 124906494 -125781360 + AT_rich Low_complexity Low_complexity 1 52 0 294 29 0 0 chr2 124906742 124906777 -125781077 + (TG)n Simple_repeat Simple_repeat 2 36 0 281 118 20 0 chr2 124907498 124907549 -125780305 + (TG)n Simple_repeat Simple_repeat 2 53 0 182 91 30 0 chr2 124907584 124907617 -125780237 + (TG)n Simple_repeat Simple_repeat 2 35 0 233 57 29 0 chr2 124907650 124907685 -125780169 + (TG)n Simple_repeat Simple_repeat 2 37 0 3353 160 4 2 chr2 124908527 124909053 -125778801 - MER1A DNA MER1_type 0 527 1 910 189 17 6 chr2 124909896 124910071 -125777783 - MER58A DNA MER1_type -3 221 45 388 322 151 0 chr2 124910793 124910945 -125776909 - MER5A DNA MER1_type 0 189 15 955 251 62 42 chr2 124911153 124911727 -125776127 - MER76 LTR ERV -30 658 1 424 272 95 74 chr2 124911729 124911972 -125775882 - Charlie8 DNA MER1_type -2169 248 1 24 0 0 0 chr2 124912891 124912915 -125774939 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 124913091 124913113 -125774741 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 124913384 124913406 -125774448 + AT_rich Low_complexity Low_complexity 1 22 0 25 65 0 0 chr2 124913511 124913557 -125774297 + AT_rich Low_complexity Low_complexity 1 46 0 2249 91 0 10 chr2 124913737 124914035 -125773819 - AluY SINE Alu -16 295 1 3135 174 19 7 chr2 124914563 124915179 -125772675 + L1MA4A LINE L1 5674 6297 -6 402 126 0 126 chr2 124915412 124915515 -125772339 + MER41B LTR ERV1 113 202 -433 364 275 17 8 chr2 124915515 124915635 -125772219 + L1MB1 LINE L1 5962 6082 -107 1543 104 83 147 chr2 124915637 124916012 -125771842 + MER4B LTR ERV1 1 351 -259 512 147 11 11 chr2 124916113 124916208 -125771646 + MER4E LTR ERV1 672 766 0 676 192 12 76 chr2 124916212 124916384 -125771470 + L1MA10 LINE L1 6085 6245 -89 293 254 28 14 chr2 124916830 124916901 -125770953 + L2 LINE L2 3242 3313 0 2719 168 57 0 chr2 124917004 124917475 -125770379 - MER41E LTR ERV1 0 512 15 1625 192 169 25 chr2 124918044 124918564 -125769290 + LTR49 LTR ERV1 1 595 0 209 398 59 17 chr2 124919022 124919133 -125768721 - L2 LINE L2 -338 2976 2871 408 20 0 0 chr2 124919133 124919182 -125768672 + (TG)n Simple_repeat Simple_repeat 1 49 0 209 398 59 17 chr2 124919182 124919306 -125768548 - L2 LINE L2 -443 2871 2731 290 334 71 33 chr2 124920720 124921041 -125766813 + L2 LINE L2 2719 3048 -224 29 0 0 0 chr2 124921299 124921328 -125766526 + AT_rich Low_complexity Low_complexity 1 29 0 185 211 79 0 chr2 124921633 124921671 -125766183 - MER5A DNA MER1_type -78 111 71 268 409 7 14 chr2 124921831 124921973 -125765881 - MIR3 SINE MIR -67 141 1 312 306 62 44 chr2 124922746 124922906 -125764948 - MIR SINE MIR -24 238 76 208 319 96 21 chr2 124926110 124926204 -125761650 + L2 LINE L2 3122 3222 -50 397 262 163 97 chr2 124926735 124927231 -125760623 - MLT1H LTR MaLR -16 533 5 1154 189 18 4 chr2 124927366 124927593 -125760261 - MER30 DNA MER1_type 0 230 1 1135 283 19 19 chr2 124927946 124928317 -125759537 + MLT1A2 LTR MaLR 4 374 0 2252 116 0 0 chr2 124928921 124929232 -125758622 - AluSx SINE Alu -1 311 1 2150 120 3 0 chr2 124929292 124929593 -125758261 - AluSq SINE Alu -11 302 1 640 274 97 107 chr2 124930006 124930407 -125757447 - MLT1H LTR MaLR -115 434 38 25 0 0 0 chr2 124931813 124931838 -125756016 + AT_rich Low_complexity Low_complexity 1 25 0 2174 89 14 3 chr2 124931840 124932133 -125755721 + AluY SINE Alu 1 296 -15 1043 218 74 7 chr2 124932234 124932505 -125755349 - L1MC3 LINE L1 -196 7589 7301 4712 244 40 25 chr2 124932507 124934799 -125753055 - L1MC3 LINE L1 -743 5403 4264 1382 173 103 11 chr2 124934809 124935080 -125752774 - AluSx SINE Alu -4 308 13 248 196 78 20 chr2 124935103 124935205 -125752649 - L1MC3 LINE L1 -1896 4250 4143 670 164 14 14 chr2 124935205 124935351 -125752503 + CT-rich Low_complexity Low_complexity 2 147 0 1115 218 15 23 chr2 124935351 124935613 -125752241 - AluJo SINE Alu -11 301 42 792 256 43 25 chr2 124935617 124935898 -125751956 - L1MC3 LINE L1 -1978 4168 3883 1128 230 42 32 chr2 124935919 124936232 -125751622 - L1MB7 LINE L1 -23 6161 5846 4076 38 0 0 chr2 124936330 124936825 -125751029 + L1PA4 LINE L1 5661 6155 0 24 0 0 0 chr2 124937432 124937456 -125750398 + AT_rich Low_complexity Low_complexity 1 24 0 2903 129 128 116 chr2 124938443 124938704 -125749150 + LTR8A LTR ERV1 1 257 -470 1356 139 56 0 chr2 124938704 124938920 -125748934 - MER30 DNA MER1_type 0 230 3 2903 129 128 116 chr2 124938920 124939376 -125748478 + LTR8A LTR ERV1 257 727 0 380 304 82 5 chr2 124939445 124939629 -125748225 - L1MB7 LINE L1 -2311 5474 5277 639 282 73 39 chr2 124939647 124940398 -125747456 - L1MB7 LINE L1 -2513 3633 2857 1229 250 77 6 chr2 124940860 124941184 -125746670 + MER4A-int LTR ERV1 1866 2212 -4119 5415 120 70 41 chr2 124941217 124941279 -125746575 + MER4A-int LTR ERV1 198 257 -6501 2858 108 7 9 chr2 124941279 124941714 -125746140 - MER57B LTR ERV1 0 434 1 5415 120 70 41 chr2 124941714 124942606 -125745248 + MER4A-int LTR ERV1 257 1180 -5578 3506 107 95 36 chr2 124942621 124942934 -125744920 + MER4A-int LTR ERV1 947 1240 -3775 2130 113 7 0 chr2 124942934 124943225 -125744629 + AluSg SINE Alu 1 293 -17 3506 107 95 36 chr2 124943225 124943575 -125744279 + MER4A-int LTR ERV1 1240 1649 -3366 1376 158 71 0 chr2 124943576 124943816 -125744038 - LTR8 LTR ERV1 -434 257 1 3956 156 63 20 chr2 124943817 124944721 -125743133 + MER4A-int LTR ERV1 2739 3681 -2917 * 16093 112 55 15 chr2 124944720 124947375 -125740479 + MER4A-int LTR ERV1 3837 6596 -2 626 131 0 10 chr2 124947383 124947482 -125740372 + MER4A LTR ERV1 1 98 -566 1706 133 8 75 chr2 124947482 124947850 -125740004 + MER4A LTR ERV1 261 662 -2 311 307 102 24 chr2 124948062 124948228 -125739626 + L1M4 LINE L1 4158 4336 -1810 2739 258 57 58 chr2 124948228 124948675 -125739179 + L1MCb LINE L1 98 544 -5950 5638 143 47 71 chr2 124948675 124948960 -125738894 + Tigger3b DNA MER2_type 1 291 -2737 2302 82 0 3 chr2 124948960 124949253 -125738601 - AluY SINE Alu -19 292 1 5638 143 47 71 chr2 124949253 124950229 -125737625 + Tigger3b DNA MER2_type 291 1231 0 2739 258 57 58 chr2 124950229 124951309 -125736545 + L1MCb LINE L1 544 1636 -4858 430 288 93 56 chr2 124951320 124952025 -125735829 - L1M4b LINE L1 -4796 2161 1335 290 179 0 15 chr2 124952707 124952774 -125735080 + CT-rich Low_complexity Low_complexity 4 69 0 21 36 0 0 chr2 124953355 124953383 -125734471 + AT_rich Low_complexity Low_complexity 1 28 0 795 281 13 13 chr2 124955322 124955546 -125732308 + MER58A DNA MER1_type 1 224 0 203 130 0 43 chr2 124956523 124956569 -125731285 + (TATAA)n Simple_repeat Simple_repeat 1 44 0 360 167 12 36 chr2 124956965 124957049 -125730805 + MLT1D LTR MaLR 422 503 -2 310 329 94 47 chr2 124957130 124957407 -125730447 - L2 LINE L2 -752 2562 2273 21 36 0 0 chr2 124957415 124957443 -125730411 + AT_rich Low_complexity Low_complexity 1 28 0 497 94 50 46 chr2 124957475 124957765 -125730089 + (TA)n Simple_repeat Simple_repeat 1 291 0 23 0 0 0 chr2 124958260 124958283 -125729571 + AT_rich Low_complexity Low_complexity 1 23 0 356 309 176 43 chr2 124958397 124958743 -125729111 - MLT1J2 LTR MaLR -56 394 3 468 332 16 48 chr2 124959617 124959930 -125727924 + L2 LINE L2 2256 2558 -756 28 91 0 0 chr2 124960812 124960889 -125726965 + AT_rich Low_complexity Low_complexity 1 77 0 240 86 0 0 chr2 124961167 124961202 -125726652 + (TG)n Simple_repeat Simple_repeat 2 36 0 459 0 0 0 chr2 124961205 124961256 -125726598 + (GA)n Simple_repeat Simple_repeat 2 52 0 180 152 0 0 chr2 124961567 124961600 -125726254 + (CATA)n Simple_repeat Simple_repeat 3 35 0 922 308 89 55 chr2 124961997 124962696 -125725158 + L2 LINE L2 2593 3310 -3 30 0 0 0 chr2 124962903 124962933 -125724921 + AT_rich Low_complexity Low_complexity 1 30 0 842 223 23 37 chr2 124962933 124963148 -125724706 - L1MB5 LINE L1 -10 6164 5953 25 0 0 0 chr2 124963153 124963178 -125724676 + AT_rich Low_complexity Low_complexity 1 25 0 4690 217 17 8 chr2 124963311 124964583 -125723271 - L1P4 LINE L1 -694 5472 4190 7894 152 11 32 chr2 124964590 124966150 -125721704 + L1P3 LINE L1 4026 5549 -605 309 224 92 0 chr2 124967053 124967147 -125720707 - MIR SINE MIR -41 167 66 1783 48 4 0 chr2 124968122 124968351 -125719503 - L1PA4 LINE L1 -3 6152 5923 273 0 0 0 chr2 124968351 124968384 -125719470 + L1PA4 LINE L1 5868 5900 -255 218 254 56 42 chr2 124968488 124968559 -125719295 - MIR SINE MIR -19 243 172 237 292 11 11 chr2 124968697 124968786 -125719068 + (CATATA)n Simple_repeat Simple_repeat 1 89 0 240 35 0 0 chr2 124968787 124968816 -125719038 + (GA)n Simple_repeat Simple_repeat 1 29 0 193 115 19 19 chr2 124968928 124968980 -125718874 + T-rich Low_complexity Low_complexity 3 54 0 23 33 0 0 chr2 124969410 124969440 -125718414 + AT_rich Low_complexity Low_complexity 1 30 0 27 62 0 0 chr2 124969670 124969718 -125718136 + AT_rich Low_complexity Low_complexity 1 48 0 380 291 8 8 chr2 124970558 124970685 -125717169 - MER94 DNA DNA 0 134 8 2375 123 11 16 chr2 124970745 124971120 -125716734 - THE1C LTR MaLR -2 373 1 285 155 0 0 chr2 124971155 124971213 -125716641 + CT-rich Low_complexity Low_complexity 1 58 0 433 58 0 0 chr2 124971343 124971401 -125716453 - L1PA3 LINE L1 -208 5947 5896 273 57 0 0 chr2 124972671 124972706 -125715148 + (CCTA)n Simple_repeat Simple_repeat 1 35 0 22 56 0 0 chr2 124974171 124974207 -125713647 + AT_rich Low_complexity Low_complexity 1 36 0 251 132 0 0 chr2 124974982 124975020 -125712834 + L1M4 LINE L1 4888 4925 -1221 * 606 257 66 8 chr2 124975006 124975211 -125712643 + L1M4 LINE L1 5536 5749 -432 515 112 10 0 chr2 124975213 124975311 -125712543 + (TCTA)n Simple_repeat Simple_repeat 2 100 0 493 202 10 0 chr2 124975353 124975452 -125712402 - L1M4 LINE L1 -1776 4370 4271 1298 239 12 30 chr2 124975452 124975786 -125712068 - MLT1A2 LTR MaLR -45 329 2 528 223 11 112 chr2 124976390 124976425 -125711429 - MLT2D LTR ERVL -5 409 372 306 73 0 0 chr2 124976425 124976466 -125711388 + (TG)n Simple_repeat Simple_repeat 1 41 0 528 223 11 112 chr2 124976466 124976618 -125711236 - MLT2D LTR ERVL -42 372 241 4856 191 36 29 chr2 124976641 124977091 -125710763 - ERVL LTR ERVL 0 5764 5319 1988 138 7 0 chr2 124977091 124977387 -125710467 - AluSq SINE Alu -15 298 1 4856 191 36 29 chr2 124977387 124977943 -125709911 - ERVL LTR ERVL -445 5319 4751 8150 213 27 25 chr2 124977960 124977990 -125709864 + ERVL LTR ERVL 2042 2070 -3694 1682 147 197 11 chr2 124977990 124978351 -125709503 - MSTA LTR MaLR 0 428 1 8150 213 27 25 chr2 124978351 124979846 -125708008 + ERVL LTR ERVL 2070 3575 -2189 2091 130 10 0 chr2 124979846 124980147 -125707707 + AluSg SINE Alu 1 304 -6 8150 213 27 25 chr2 124980147 124980336 -125707518 + ERVL LTR ERVL 3575 3762 -2002 1738 84 25 0 chr2 124980341 124980578 -125707276 - MLT2A1 LTR ERVL 0 444 202 1637 195 87 6 chr2 124980678 124981012 -125706842 - Tigger7 DNA MER2_type -372 361 1 1615 96 4 28 chr2 124981043 124981294 -125706560 + L1PA8 LINE L1 5923 6167 -5 569 196 0 72 chr2 124981647 124981785 -125706069 - FLAM_C SINE Alu -5 128 1 2353 86 0 0 chr2 124981786 124982088 -125705766 - AluY SINE Alu -4 307 6 23 0 0 0 chr2 124982312 124982335 -125705519 + AT_rich Low_complexity Low_complexity 1 23 0 1536 174 13 43 chr2 124983077 124983376 -125704478 - MSTB1 LTR MaLR -50 382 93 476 286 78 42 chr2 124983613 124983896 -125703958 - L1MEc LINE L1 -3056 3159 2867 1188 307 54 63 chr2 124983987 124985421 -125702433 - L1MEc LINE L1 -4939 1457 37 1664 148 63 36 chr2 124986828 124987193 -125700661 - THE1C LTR MaLR 0 375 1 1198 122 5 16 chr2 124987193 124987382 -125700472 - THE1C-int LTR MaLR 0 1580 1394 1770 129 54 43 chr2 124987411 124987782 -125700072 - THE1C LTR MaLR 0 375 1 7395 27 1 1 chr2 124988573 124989991 -125697863 - L1PA3 LINE L1 -236 5919 4503 1623 59 0 0 chr2 124989991 124990194 -125697660 + L1PA3 LINE L1 5950 6152 -3 1572 224 129 7 chr2 124990258 124990700 -125697154 - MLT1D LTR MaLR -9 496 1 1578 274 12 79 chr2 124990758 124991327 -125696527 - MLT1D-int LTR MaLR -182 1189 659 879 233 21 17 chr2 124991460 124991696 -125696158 - MLT1D-int LTR MaLR -765 606 370 2440 189 30 10 chr2 124992619 124993123 -125694731 - L1PA16 LINE L1 -1 6165 5652 387 74 0 0 chr2 124993230 124993284 -125694570 - MLT2A1 LTR ERVL -390 54 1 19535 89 6 19 chr2 124993284 124993719 -125694135 - HERVL-A1 LTR ERVL 0 5654 5215 222 91 0 0 chr2 124993719 124993752 -125694102 + (TA)n Simple_repeat Simple_repeat 2 34 0 19535 89 6 19 chr2 124993752 124996004 -125691850 - HERVL-A1 LTR ERVL -439 5215 3003 3244 57 2 53 chr2 124996000 124996453 -125691401 - HERVL-A1 LTR ERVL -5224 430 1 * 3154 78 18 25 chr2 124996453 124996900 -125690954 - MLT2A1 LTR ERVL 0 444 1 4826 214 12 10 chr2 124996901 124997893 -125689961 + ERVL LTR ERVL 3764 4757 -1007 208 120 40 20 chr2 124998228 124998278 -125689576 + T-rich Low_complexity Low_complexity 4 54 0 2220 116 0 0 chr2 124999014 124999316 -125688538 + AluSg SINE Alu 1 302 -8 2025 169 182 19 chr2 124999382 124999854 -125688000 - MER44D DNA MER2_type 0 605 2 2428 87 36 8 chr2 125000974 125001332 -125686522 - L1PA12 LINE L1 0 6168 5801 258 368 69 21 chr2 125001599 125001743 -125686111 - L2 LINE L2 -1 3271 3121 343 253 30 0 chr2 125001851 125001950 -125685904 - L1M4 LINE L1 -3338 2808 2707 * 544 289 98 10 chr2 125001948 125002366 -125685488 - L1 LINE L1 -2285 3861 3377 454 238 43 11 chr2 125002378 125002563 -125685291 + L1ME1 LINE L1 2785 2975 -3171 548 333 42 9 chr2 125002570 125002786 -125685068 + L1ME1 LINE L1 16 238 -6171 1769 253 77 65 chr2 125002852 125004008 -125683846 + L1ME1 LINE L1 2884 4053 -2353 2569 79 23 9 chr2 125004008 125004391 -125683463 + MLT2A1 LTR ERVL 1 444 0 1526 277 37 45 chr2 125004391 125005127 -125682727 + L1ME1 LINE L1 4049 4778 -1628 295 235 151 17 chr2 125005184 125005303 -125682551 + L1ME1 LINE L1 5078 5212 -1194 1046 255 111 22 chr2 125005458 125006307 -125681547 + L1ME1 LINE L1 5310 6379 -45 578 268 92 16 chr2 125006345 125006752 -125681102 + L1ME1 LINE L1 4389 4764 -1402 372 22 0 0 chr2 125006752 125006797 -125681057 + (TG)n Simple_repeat Simple_repeat 2 46 0 578 268 92 16 chr2 125006797 125007713 -125680141 + L1ME1 LINE L1 4764 5923 -243 826 133 31 0 chr2 125007719 125007847 -125680007 - MER6 DNA MER2_type 0 865 734 242 302 70 0 chr2 125008003 125008089 -125679765 - MER5A DNA MER1_type -93 96 5 282 85 0 0 chr2 125008230 125008277 -125679577 + L1PA2 LINE L1 6109 6155 0 2062 168 70 19 chr2 125008287 125008601 -125679253 - Tigger2a DNA MER2_type -2275 433 92 186 43 0 0 chr2 125008601 125008624 -125679230 + (GGA)n Simple_repeat Simple_repeat 1 23 0 2062 168 70 19 chr2 125008624 125008721 -125679133 - Tigger2a DNA MER2_type -2616 92 1 2167 117 3 0 chr2 125008877 125009186 -125678668 + AluSp SINE Alu 1 310 -3 302 269 142 28 chr2 125009466 125009607 -125678247 - MIR SINE MIR -41 221 65 307 297 101 47 chr2 125010566 125010714 -125677140 - L2 LINE L2 0 3313 3158 1089 157 16 6 chr2 125010933 125011143 -125676711 + MLT1D LTR MaLR 1 184 -321 2224 132 19 56 chr2 125011228 125011773 -125676081 + LTR49 LTR ERV1 21 595 0 635 300 68 13 chr2 125011784 125012021 -125675833 + MLT1D LTR MaLR 256 505 0 22 70 0 0 chr2 125012409 125012452 -125675402 + AT_rich Low_complexity Low_complexity 1 43 0 207 255 0 0 chr2 125013149 125013196 -125674658 + CT-rich Low_complexity Low_complexity 2 48 0 217 300 183 25 chr2 125014210 125014330 -125673524 + L2 LINE L2 3126 3264 -8 267 31 0 0 chr2 125014703 125014735 -125673119 + (CA)n Simple_repeat Simple_repeat 1 32 0 237 119 0 0 chr2 125014942 125014984 -125672870 + (CA)n Simple_repeat Simple_repeat 1 42 0 495 349 71 25 chr2 125015981 125016374 -125671480 - L3 LINE CR1 -265 1312 902 306 385 23 6 chr2 125016589 125016763 -125671091 - L3 LINE CR1 -701 876 700 24 32 0 0 chr2 125016939 125016970 -125670884 + AT_rich Low_complexity Low_complexity 1 31 0 231 114 0 0 chr2 125017255 125017290 -125670564 + (CAT)n Simple_repeat Simple_repeat 2 36 0 2289 207 33 12 chr2 125017329 125017347 -125670507 - L1MC2 LINE L1 -2 6342 6326 1800 163 0 3 chr2 125017347 125017654 -125670200 + AluSx SINE Alu 1 306 -6 2289 207 33 12 chr2 125017654 125018146 -125669708 - L1MC2 LINE L1 -18 6326 5821 2065 95 0 27 chr2 125019231 125019559 -125668295 + AluSx SINE Alu 1 320 0 197 303 92 28 chr2 125019729 125019838 -125668016 - MIR SINE MIR -98 164 49 1959 232 70 75 chr2 125020201 125020898 -125666956 - LTR8A LTR ERV1 0 727 34 722 201 7 7 chr2 125021059 125021203 -125666651 - Tigger7 DNA MER2_type -2 2489 2346 1002 213 30 13 chr2 125021208 125021438 -125666416 - Tigger7 DNA MER2_type -81 652 419 5129 184 42 39 chr2 125071980 125073195 -125614659 - L1 LINE L1 -1287 4859 3641 815 181 21 0 chr2 125073218 125073411 -125614443 - L1 LINE L1 -2695 3451 3255 709 11 22 0 chr2 125073516 125073606 -125614248 + (GA)n Simple_repeat Simple_repeat 1 92 0 2981 111 36 18 chr2 125073606 125074049 -125613805 - HERVS71 LTR ERV1 -8527 451 1 4060 57 57 0 chr2 125074049 125074577 -125613277 - LTR6B LTR ERV1 0 558 1 234 178 0 0 chr2 125074771 125074816 -125613038 + A-rich Low_complexity Low_complexity 4 48 0 6185 23 0 0 chr2 125075465 125076494 -125611360 - L1P1 LINE L1 -476 5679 4651 42495 37 22 1 chr2 125076661 125082558 -125605296 + L1PA3 LINE L1 11 6033 -122 539 263 57 79 chr2 125083364 125083870 -125603984 + HAL1b LINE L1 136 630 -718 24 0 0 0 chr2 125083954 125083978 -125603876 + AT_rich Low_complexity Low_complexity 1 24 0 1303 199 84 11 chr2 125084078 125084340 -125603514 + AluJb SINE Alu 15 295 -17 228 264 0 0 chr2 125084341 125084413 -125603441 + L1MC4 LINE L1 6632 6703 -1339 * 239 156 0 0 chr2 125084386 125084431 -125603423 - L1MC4 LINE L1 -1340 6702 6658 390 260 10 0 chr2 125084631 125084731 -125603123 + MER58B DNA MER1_type 241 341 0 23 54 0 0 chr2 125084731 125084768 -125603086 + AT_rich Low_complexity Low_complexity 1 37 0 21 57 0 0 chr2 125085213 125085248 -125602606 + AT_rich Low_complexity Low_complexity 1 35 0 1970 133 37 0 chr2 125086319 125086619 -125601235 + AluSx SINE Alu 1 311 -1 423 138 191 0 chr2 125087516 125087610 -125600244 + MLT1B LTR MaLR 1 112 -278 21 36 0 0 chr2 125088302 125088330 -125599524 + AT_rich Low_complexity Low_complexity 1 28 0 185 86 57 0 chr2 125089582 125089617 -125598237 + T-rich Low_complexity Low_complexity 3 39 0 1028 212 15 5 chr2 125089630 125089833 -125598021 - AluJo SINE Alu -24 288 84 393 348 17 0 chr2 125089871 125089986 -125597868 + L2 LINE L2 3155 3271 -1 192 40 0 0 chr2 125090138 125090163 -125597691 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 195 315 92 62 chr2 125090311 125090441 -125597413 - MIR3 SINE MIR -14 194 61 1841 191 9 35 chr2 125090503 125090687 -125597167 - L1MA10 LINE L1 -1 6333 6146 189 74 0 0 chr2 125090687 125090714 -125597140 + (TTTAG)n Simple_repeat Simple_repeat 5 31 0 1841 191 9 35 chr2 125090714 125090953 -125596901 - L1MA10 LINE L1 -188 6146 5921 1356 220 118 27 chr2 125091303 125091744 -125596110 - L1MD2 LINE L1 -228 6131 5651 670 289 76 14 chr2 125091746 125091957 -125595897 + MER58A DNA MER1_type 1 224 0 1071 265 82 11 chr2 125092012 125092512 -125595342 + MLT1E LTR MaLR 13 593 0 2324 256 61 48 chr2 125092534 125092758 -125595096 - L1MD2 LINE L1 -743 5403 5183 1460 163 86 50 chr2 125092758 125093120 -125594734 + THE1C LTR MaLR 1 375 0 2324 256 61 48 chr2 125093120 125094051 -125593803 - L1MD2 LINE L1 -963 5183 4407 2290 91 0 0 chr2 125094051 125094347 -125593507 + AluSg SINE Alu 3 298 -12 2324 256 61 48 chr2 125094347 125094686 -125593168 - L1MD2 LINE L1 -1739 4407 4074 238 406 46 10 chr2 125095191 125095388 -125592466 - MIR SINE MIR -30 232 29 22 70 0 0 chr2 125097738 125097781 -125590073 + AT_rich Low_complexity Low_complexity 1 43 0 283 316 90 23 chr2 125098342 125098475 -125589379 - MIR SINE MIR -38 224 83 21 36 0 0 chr2 125098983 125099011 -125588843 + AT_rich Low_complexity Low_complexity 1 28 0 375 397 45 35 chr2 125099689 125100257 -125587597 + L2 LINE L2 2446 3035 -237 219 355 33 8 chr2 125100922 125101043 -125586811 - MIR SINE MIR -61 201 78 1342 149 203 4 chr2 125101253 125101494 -125586360 + AluSx SINE Alu 1 289 -23 381 93 0 0 chr2 125102477 125102531 -125585323 + (TG)n Simple_repeat Simple_repeat 1 54 0 756 187 29 175 chr2 125103026 125103347 -125584507 - MLT1A1 LTR MaLR -12 353 103 2289 117 0 0 chr2 125103347 125103655 -125584199 - AluSg SINE Alu -2 308 1 756 187 29 175 chr2 125103655 125103744 -125584110 - MLT1A1 LTR MaLR -262 103 3 975 114 117 22 chr2 125104424 125104645 -125583209 - LTR7 LTR ERV1 -152 298 1 1807 174 11 15 chr2 125104652 125105183 -125582671 - HERVH LTR ERV1 -2297 4232 3806 * 7207 160 2 12 chr2 125105177 125106443 -125581411 - HERVH LTR ERV1 -4126 3587 2335 4879 125 33 7 chr2 125106538 125107298 -125580556 + LTR17 LTR ERV1 1 780 0 269 156 0 16 chr2 125107614 125107633 -125580221 + GA-rich Low_complexity Low_complexity 3 21 -44 4526 136 16 45 chr2 125107633 125108435 -125579419 + MER4E LTR ERV1 1 779 0 269 156 0 16 chr2 125108435 125108479 -125579375 + GA-rich Low_complexity Low_complexity 21 65 0 1209 159 44 112 chr2 125109331 125109652 -125578202 - AluJo SINE Alu -3 299 1 24 0 0 0 chr2 125110412 125110436 -125577418 + AT_rich Low_complexity Low_complexity 1 24 0 516 276 33 0 chr2 125110446 125110598 -125577256 + MER46C DNA MER2_type 68 224 -114 1026 179 0 21 chr2 125110734 125110960 -125576894 + AluJb SINE Alu 111 312 0 1988 152 48 22 chr2 125111084 125111439 -125576415 - THE1B LTR MaLR 0 364 1 2140 123 0 0 chr2 125111548 125111840 -125576014 - AluSx SINE Alu -20 292 1 225 345 99 0 chr2 125112945 125113087 -125574767 + L2 LINE L2 2687 2842 -472 27 29 0 0 chr2 125113255 125113289 -125574565 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 125113366 125113387 -125574467 + AT_rich Low_complexity Low_complexity 1 21 0 578 294 125 50 chr2 125113492 125113756 -125574098 - MLT1J2 LTR MaLR 0 450 150 2266 183 62 9 chr2 125113756 125114194 -125573660 - LOR1b LTR ERV1 0 461 1 578 294 125 50 chr2 125114194 125114289 -125573565 - MLT1J2 LTR MaLR -300 150 64 384 331 64 78 chr2 125114555 125114755 -125573099 + MLT1K LTR MaLR 95 296 -292 189 0 0 0 chr2 125114755 125114776 -125573078 + (TTG)n Simple_repeat Simple_repeat 1 21 0 384 331 64 78 chr2 125114776 125115076 -125572778 + MLT1K LTR MaLR 296 588 0 309 290 29 0 chr2 125115506 125115644 -125572210 + (TA)n Simple_repeat Simple_repeat 1 142 0 1884 182 15 6 chr2 125115764 125116105 -125571749 - MER7A DNA MER2_type 0 346 5 358 271 174 26 chr2 125118604 125118759 -125569095 + L2 LINE L2 2340 2517 -797 300 279 25 16 chr2 125119444 125119566 -125568288 + L1M3c LINE L1 904 1026 -5115 814 273 107 49 chr2 125119569 125119914 -125567940 + MLT1A1 LTR MaLR 1 365 0 2597 232 29 45 chr2 125119924 125120798 -125567056 + L1M4c LINE L1 801 1660 -4724 978 185 42 9 chr2 125120927 125121143 -125566711 + L1MC1 LINE L1 6111 6333 0 3028 195 40 12 chr2 125121152 125121834 -125566020 + L1MB3 LINE L1 5476 6176 -7 589 322 60 42 chr2 125121839 125122221 -125565633 + L2 LINE L2 2904 3292 -21 23 0 0 0 chr2 125122432 125122455 -125565399 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 29 chr2 125122770 125122782 -125565072 + AT_rich Low_complexity Low_complexity 1 12 -22 2101 105 3 17 chr2 125122782 125123078 -125564776 - AluSq SINE Alu -21 292 1 24 0 0 29 chr2 125123078 125123100 -125564754 + AT_rich Low_complexity Low_complexity 12 34 0 32 26 0 0 chr2 125123211 125123250 -125564604 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 125124387 125124410 -125563444 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 125125092 125125118 -125562736 + AT_rich Low_complexity Low_complexity 1 26 0 522 274 64 41 chr2 125125406 125125679 -125562175 - L1MC5 LINE L1 -1005 6803 6565 477 62 0 0 chr2 125126498 125126562 -125561292 + AluSg SINE Alu 1 64 -246 13768 175 25 18 chr2 125126662 125126943 -125560911 + L1MA2 LINE L1 2184 2461 -5262 1647 127 51 0 chr2 125126943 125127196 -125560658 + AluSg SINE Alu 40 305 -5 13768 175 25 18 chr2 125127196 125128784 -125559070 + L1MA2 LINE L1 2461 4036 -3687 4265 174 63 47 chr2 125128784 125129838 -125558016 - MER11C LTR ERVK 0 1071 1 13768 175 25 18 chr2 125129838 125131518 -125556336 + L1MA2 LINE L1 4036 5702 -2021 718 150 0 16 chr2 125131518 125131645 -125556209 + L1PB1 LINE L1 6027 6151 0 13768 175 25 18 chr2 125131645 125133342 -125554512 + L1MA2 LINE L1 5702 7481 -242 186 43 0 0 chr2 125133342 125133365 -125554489 + (TAA)n Simple_repeat Simple_repeat 2 24 0 13768 175 25 18 chr2 125133365 125133602 -125554252 + L1MA2 LINE L1 7481 7715 -8 313 336 131 19 chr2 125133714 125133928 -125553926 - MIR SINE MIR -7 255 18 24 0 0 0 chr2 125134812 125134836 -125553018 + AT_rich Low_complexity Low_complexity 1 24 0 228 279 19 29 chr2 125135637 125135741 -125552113 + MLT1J LTR MaLR 4 106 -405 335 330 47 21 chr2 125135948 125136139 -125551715 + MLT1J LTR MaLR 314 509 -2 194 350 0 0 chr2 125137505 125137565 -125550289 - MIR SINE MIR -154 108 49 1507 305 98 28 chr2 125137739 125138385 -125549469 - L2 LINE L2 -548 2766 2076 837 11 0 0 chr2 125139021 125139115 -125548739 - L1P LINE L1 -1540 4606 4513 4308 18 4 2 chr2 125139115 125139602 -125548252 + L1PA2 LINE L1 5647 6152 -3 1300 230 77 20 chr2 125139653 125140057 -125547797 - L1MB4 LINE L1 -17 6661 6235 * 1653 253 95 60 chr2 125140053 125141120 -125546734 - L1MB4 LINE L1 -1481 5163 4060 2281 209 70 12 chr2 125141123 125141634 -125546220 - MER74A LTR ERVL -2 556 16 2836 275 39 28 chr2 125141634 125142963 -125544891 - L1MB4 LINE L1 -2588 4056 2713 210 91 0 0 chr2 125143036 125143069 -125544785 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 625 236 179 64 chr2 125143097 125143456 -125544398 - L1MB4 LINE L1 -5584 958 584 423 56 42 0 chr2 125143598 125143669 -125544185 + (TTTC)n Simple_repeat Simple_repeat 3 76 0 1439 223 16 7 chr2 125143683 125143992 -125543862 - AluJo SINE Alu 0 312 1 264 106 106 0 chr2 125144791 125144838 -125543016 - MIR SINE MIR -116 146 95 300 333 21 0 chr2 125144998 125145094 -125542760 + L2 LINE L2 3159 3256 -16 249 416 9 0 chr2 125145451 125145564 -125542290 + L2 LINE L2 2934 3047 -225 1037 301 28 11 chr2 125146122 125146478 -125541376 + L1MEc LINE L1 237 598 -5798 1519 274 103 25 chr2 125146493 125147380 -125540474 + L1MEc LINE L1 662 1617 -4779 3187 261 59 24 chr2 125147384 125148739 -125539115 + L1MEc LINE L1 2661 4062 -2153 1939 111 0 0 chr2 125149027 125149316 -125538538 - AluSq SINE Alu 0 310 22 3154 204 47 1 chr2 125149886 125150546 -125537308 - L1MB2 LINE L1 -9 6162 5473 1888 101 0 8 chr2 125151469 125151727 -125536127 - AluSg1 SINE Alu -5 304 49 1566 88 23 5 chr2 125153638 125153854 -125534000 - AluSc SINE Alu -16 293 74 258 139 0 0 chr2 125153860 125153896 -125533958 - AluSc SINE Alu -267 36 1 206 361 90 23 chr2 125153897 125154030 -125533824 - L2 LINE L2 -21 3251 3110 1247 222 142 35 chr2 125154212 125154663 -125533191 - MLT1D LTR MaLR -3 502 4 1982 138 0 3 chr2 125154909 125155205 -125532649 - AluSq SINE Alu -14 299 5 23 0 0 0 chr2 125155300 125155323 -125532531 + AT_rich Low_complexity Low_complexity 1 23 0 591 274 26 26 chr2 125155895 125156085 -125531769 - MER3 DNA MER1_type -14 195 6 2058 122 7 0 chr2 125156112 125156408 -125531446 + AluSx SINE Alu 1 298 -14 1306 215 101 18 chr2 125156632 125157018 -125530836 - LTR52 LTR ERVL -3 418 1 416 259 251 45 chr2 125157476 125157723 -125530131 + MLT1E3 LTR MaLR 3 300 -324 273 288 106 6 chr2 125157870 125158040 -125529814 + MARNA DNA Mariner 86 272 -314 307 309 22 72 chr2 125158557 125158738 -125529116 - MIR SINE MIR -6 256 85 2164 118 0 13 chr2 125158876 125159182 -125528672 + AluY SINE Alu 1 302 -9 308 281 181 47 chr2 125160412 125160583 -125527271 - MIR SINE MIR -27 235 42 591 10 62 0 chr2 125160842 125160938 -125526916 + (TC)n Simple_repeat Simple_repeat 1 102 0 6764 71 40 1 chr2 125160939 125161817 -125526037 + HERVS71 LTR ERV1 502 1413 -7565 5471 132 102 105 chr2 125161817 125164597 -125523257 + pTR5 LTR ERV1 743 2438 0 13602 104 8 1 chr2 125164600 125166414 -125521440 + HERVS71 LTR ERV1 1410 3236 -5742 5694 132 38 5 chr2 125166396 125167231 -125520623 + HERVS71 LTR ERV1 4803 5665 -3313 * 12626 100 7 0 chr2 125167228 125168913 -125518941 + HERVS71 LTR ERV1 6091 7786 -1192 2349 95 3 0 chr2 125168910 125169225 -125518629 + HERVS71 LTR ERV1 8594 8909 -69 * 4029 48 63 0 chr2 125169225 125169750 -125518104 + LTR6B LTR ERV1 1 558 0 6659 188 107 40 chr2 125170463 125172280 -125515574 + L1MC3 LINE L1 251 2189 -4237 1476 184 17 75 chr2 125172264 125172623 -125515231 + L1MC1 LINE L1 5995 6332 -1 * 363 291 97 8 chr2 125173088 125173222 -125514632 + MIR SINE MIR 30 175 -87 974 171 0 6 chr2 125175950 125176108 -125511746 + FRAM SINE Alu 1 153 -23 198 204 34 0 chr2 125176109 125176197 -125511657 + (TA)n Simple_repeat Simple_repeat 2 92 0 325 283 0 11 chr2 125176199 125176291 -125511563 + L1MC4 LINE L1 6614 6704 -1338 207 156 0 0 chr2 125176532 125176565 -125511289 + (TG)n Simple_repeat Simple_repeat 1 33 0 2191 107 3 0 chr2 125177787 125178077 -125509777 + AluSp SINE Alu 1 291 -22 28 0 0 0 chr2 125178182 125178210 -125509644 + AT_rich Low_complexity Low_complexity 1 28 0 4281 240 39 36 chr2 125178590 125178806 -125509048 + L1MC3 LINE L1 4480 4694 -1732 556 37 37 0 chr2 125178806 125178888 -125508966 + (TCTA)n Simple_repeat Simple_repeat 1 85 0 4281 240 39 36 chr2 125178888 125181004 -125506850 + L1MC3 LINE L1 4694 5683 -743 831 161 36 0 chr2 125181158 125181326 -125506528 + L1MA6 LINE L1 6127 6300 0 857 278 120 72 chr2 125181347 125181781 -125506073 + MLT1E LTR MaLR 114 593 0 1677 183 10 10 chr2 125182153 125182464 -125505390 - AluJo SINE Alu -1 311 1 574 278 65 41 chr2 125183501 125183746 -125504108 - Charlie8 DNA MER1_type -2141 276 26 1579 221 58 13 chr2 125184069 125184463 -125503391 - MLT2D LTR ERVL -2 412 1 23 33 0 0 chr2 125184907 125184937 -125502917 + AT_rich Low_complexity Low_complexity 1 30 0 8130 259 48 14 chr2 125185410 125190507 -125497347 - L1MB4 LINE L1 -320 6358 978 219 114 0 0 chr2 125190507 125190542 -125497312 + (TATG)n Simple_repeat Simple_repeat 2 36 0 8130 259 48 14 chr2 125190542 125190703 -125497151 - L1MB4 LINE L1 -5700 978 824 378 260 48 27 chr2 125191201 125191347 -125496507 - L1MB4 LINE L1 -6331 211 63 30 0 0 0 chr2 125191716 125191746 -125496108 + AT_rich Low_complexity Low_complexity 1 30 0 188 394 29 24 chr2 125192824 125192994 -125494860 - MIR SINE MIR -74 188 18 26 64 0 0 chr2 125193227 125193274 -125494580 + AT_rich Low_complexity Low_complexity 1 47 0 2115 117 0 0 chr2 125194417 125194721 -125493133 + AluSx SINE Alu 1 304 0 1557 278 54 46 chr2 125194758 125195388 -125492466 + L1ME1 LINE L1 5474 6108 -58 33 0 0 0 chr2 125195440 125195473 -125492381 + AT_rich Low_complexity Low_complexity 1 33 0 1380 176 96 8 chr2 125196295 125196400 -125491454 + AluJo SINE Alu 1 95 -217 180 0 0 0 chr2 125196400 125196420 -125491434 + (CAA)n Simple_repeat Simple_repeat 2 21 0 424 64 11 43 chr2 125196422 125196516 -125491338 + (TA)n Simple_repeat Simple_repeat 2 92 0 1380 176 96 8 chr2 125196516 125196668 -125491186 + AluJo SINE Alu 95 284 -28 270 176 0 0 chr2 125196755 125196806 -125491048 + (CATA)n Simple_repeat Simple_repeat 2 52 0 315 230 0 40 chr2 125196811 125196911 -125490943 + L1MC4 LINE L1 6614 6709 -1333 2958 231 54 24 chr2 125196916 125197326 -125490528 - L1MB8 LINE L1 -50 6128 5732 2202 113 6 10 chr2 125197326 125197637 -125490217 - AluSg SINE Alu 0 310 1 2958 231 54 24 chr2 125197637 125198190 -125489664 - L1MB8 LINE L1 -446 5732 5147 610 341 10 10 chr2 125198629 125198837 -125489017 + MLT1I LTR MaLR 187 394 -15 22 35 0 0 chr2 125199362 125199391 -125488463 + AT_rich Low_complexity Low_complexity 1 29 0 435 290 95 10 chr2 125199845 125200045 -125487809 + MIR SINE MIR 20 236 -26 209 275 217 0 chr2 125200056 125200125 -125487729 - MIR SINE MIR -65 143 60 240 238 29 105 chr2 125200409 125200514 -125487340 + MER94 DNA DNA 38 134 0 285 309 46 4 chr2 125201696 125201838 -125486016 - MIR SINE MIR -62 146 5 519 17 0 0 chr2 125202267 125202327 -125485527 + (CA)n Simple_repeat Simple_repeat 1 60 0 382 311 30 3 chr2 125203411 125203615 -125484239 + L1M4 LINE L1 4827 5039 -1107 553 269 55 7 chr2 125204011 125204156 -125483698 - LTR33 LTR ERVL -357 164 13 417 324 22 0 chr2 125204156 125204335 -125483519 + L1M4 LINE L1 4660 4842 -1304 204 158 0 26 chr2 125204387 125204425 -125483429 + A-rich Low_complexity Low_complexity 3 39 0 1153 312 82 26 chr2 125204819 125205358 -125482496 - L2 LINE L2 -1776 1538 970 659 334 93 32 chr2 125205359 125205489 -125482365 - L2 LINE L2 -2630 684 563 205 51 51 0 chr2 125205489 125205528 -125482326 + T-rich Low_complexity Low_complexity 2 42 0 659 334 93 32 chr2 125205528 125205837 -125482017 - L2 LINE L2 -2751 563 218 581 306 31 5 chr2 125205837 125206059 -125481795 - L2 LINE L2 -770 2544 2317 318 333 44 28 chr2 125206135 125206315 -125481539 - L1ME3A LINE L1 0 6564 6382 482 296 87 43 chr2 125206407 125206738 -125481116 - L1ME3A LINE L1 -208 6356 6007 2044 154 0 20 chr2 125206738 125207088 -125480766 - MER61A LTR ERV1 0 343 1 482 296 87 43 chr2 125207088 125207193 -125480661 - L1ME3A LINE L1 -557 6007 5908 308 277 40 94 chr2 125207310 125207512 -125480342 + MER69 DNA AcHobo 310 500 -2026 518 170 60 175 chr2 125207585 125207950 -125479904 + MER69 DNA AcHobo 1619 1941 -585 1151 22 0 0 chr2 125207984 125208119 -125479735 - L1P2 LINE L1 -545 5609 5475 2537 16 3 7 chr2 125208128 125208431 -125479423 - L1PA2 LINE L1 0 6155 5854 4774 30 0 0 chr2 125208431 125208987 -125478867 + L1PA5 LINE L1 5591 6148 -6 850 205 133 11 chr2 125209015 125209293 -125478561 + MER69 DNA AcHobo 2010 2321 -205 1668 128 93 19 chr2 125209312 125209625 -125478229 - THE1C LTR MaLR -39 336 1 258 212 30 22 chr2 125209792 125209926 -125477928 - L1ME3A LINE L1 -768 5794 5661 225 204 0 0 chr2 125209945 125209989 -125477865 + (TA)n Simple_repeat Simple_repeat 1 44 0 426 324 78 51 chr2 125209995 125210544 -125477310 - L1ME3A LINE L1 -935 5605 5042 247 263 26 0 chr2 125210560 125210636 -125477218 - L1ME3A LINE L1 -1548 4992 4915 202 0 59 29 chr2 125210649 125210683 -125477171 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1958 110 0 60 chr2 125210686 125210986 -125476868 - AluSx SINE Alu -30 282 1 1653 205 15 40 chr2 125211181 125211307 -125476547 + L1 LINE L1 3277 3405 -2741 2218 87 0 0 chr2 125211307 125211595 -125476259 - AluY SINE Alu -23 288 1 1653 205 15 40 chr2 125211595 125211922 -125475932 + L1 LINE L1 3405 3719 -2427 1971 31 0 0 chr2 125212037 125212266 -125475588 + L1PA4 LINE L1 5616 5844 -311 434 285 133 38 chr2 125212268 125212634 -125475220 - L1ME3A LINE L1 -909 1992 1727 342 253 134 45 chr2 125212651 125212853 -125475001 - L1ME3A LINE L1 -5062 1478 1259 33 25 0 0 chr2 125213770 125213810 -125474044 + AT_rich Low_complexity Low_complexity 1 40 0 2651 45 0 0 chr2 125214175 125214485 -125473369 + AluY SINE Alu 1 310 -1 2931 240 16 7 chr2 125215118 125215871 -125471983 - L1 LINE L1 -3161 4047 3288 890 240 20 55 chr2 125215908 125216564 -125471290 - L1 LINE L1 -3903 3305 2677 655 225 58 23 chr2 125216596 125216829 -125471025 - L1 LINE L1 -4443 2766 2533 252 200 0 0 chr2 125216807 125216862 -125470992 - L1M4 LINE L1 -888 6320 6266 * 315 0 0 0 chr2 125216952 125216987 -125470867 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 502 413 33 6 chr2 125217111 125217440 -125470414 - L1 LINE L1 -5319 1890 1553 989 294 38 24 chr2 125217461 125217836 -125470018 - L1 LINE L1 -6128 1081 289 1238 252 42 36 chr2 125217875 125218236 -125469618 + MLT1A2 LTR MaLR 9 371 -3 430 207 148 0 chr2 125218242 125218377 -125469477 + L1M LINE L1 5254 5408 -766 249 196 0 0 chr2 125218382 125218438 -125469416 + CT-rich Low_complexity Low_complexity 1 56 0 618 224 4 16 chr2 125218451 125218705 -125469149 + CT-rich Low_complexity Low_complexity 1 251 0 234 0 0 0 chr2 125218720 125218746 -125469108 + (T)n Simple_repeat Simple_repeat 1 26 0 2148 109 7 0 chr2 125219485 125219779 -125468075 - AluSx SINE Alu -16 296 1 277 222 48 87 chr2 125219798 125219924 -125467930 - HAL1b LINE L1 -415 933 813 343 312 47 59 chr2 125220214 125220467 -125467387 - HAL1b LINE L1 -778 570 321 958 257 319 18 chr2 125222004 125222615 -125465239 + LTR50 LTR ERVL 1 795 0 657 365 54 29 chr2 125223235 125224305 -125463549 + ERVL LTR ERVL 757 1809 -3845 343 304 7 58 chr2 125224503 125224641 -125463213 + ERVL LTR ERVL 2083 2213 -3551 565 291 60 19 chr2 125225112 125225380 -125462474 - LTR41 LTR ERVL -494 279 1 252 194 102 61 chr2 125225390 125225488 -125462366 - MLT1J LTR MaLR -324 187 86 4386 58 35 35 chr2 125225649 125226258 -125461596 - L1PA8 LINE L1 -7 6165 5557 24 32 0 0 chr2 125226770 125226801 -125461053 + AT_rich Low_complexity Low_complexity 1 31 0 30 69 0 0 chr2 125227152 125227210 -125460644 + AT_rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr2 125227654 125227676 -125460178 + AT_rich Low_complexity Low_complexity 1 22 0 250 222 16 32 chr2 125228113 125228176 -125459678 - MLT1F LTR MaLR -217 325 264 * 807 300 41 14 chr2 125228155 125228445 -125459409 - MLT1H LTR MaLR -229 320 23 1659 182 26 23 chr2 125228521 125228823 -125459031 + AluJb SINE Alu 1 303 -9 305 300 11 0 chr2 125229849 125229939 -125457915 - MLT1H-int LTR MaLR -1276 95 5 334 286 171 23 chr2 125229953 125230170 -125457684 - MLT1H LTR MaLR -21 534 286 390 313 50 25 chr2 125230198 125230399 -125457455 - MLT1H LTR MaLR -237 312 107 881 151 0 36 chr2 125230505 125230671 -125457183 + AluSp/q SINE Alu 154 313 0 324 299 167 41 chr2 125230811 125231032 -125456822 + MIR SINE MIR 3 251 -11 280 222 0 0 chr2 125231660 125231723 -125456131 + MER46C DNA MER2_type 1 63 -275 26 30 0 0 chr2 125231998 125232031 -125455823 + AT_rich Low_complexity Low_complexity 1 33 0 425 302 50 37 chr2 125232977 125233275 -125454579 - HAL1b LINE L1 -758 590 289 413 266 42 0 chr2 125233325 125233468 -125454386 - MER103 DNA DNA -7 159 11 1925 155 18 36 chr2 125234200 125234587 -125453267 - L1PB4 LINE L1 -1 6155 5776 325 272 0 22 chr2 125234593 125234685 -125453169 - L1MC4 LINE L1 -1339 6703 6614 9767 190 25 21 chr2 125234711 125237487 -125450367 - L1PB4 LINE L1 -391 5765 2981 2023 149 56 65 chr2 125238127 125238557 -125449297 + MSTA LTR MaLR 3 428 0 251 222 37 9 chr2 125240403 125240511 -125447343 + (TA)n Simple_repeat Simple_repeat 2 112 0 380 297 130 11 chr2 125240993 125241178 -125446676 - MIR SINE MIR -7 255 49 22 0 0 0 chr2 125241586 125241608 -125446246 + AT_rich Low_complexity Low_complexity 1 22 0 1053 296 92 37 chr2 125243310 125243884 -125443970 + L2 LINE L2 2371 2976 -338 3507 213 72 8 chr2 125243921 125244788 -125443066 - L1MB4 LINE L1 0 6180 5259 1245 150 22 31 chr2 125244788 125245015 -125442839 - MER30 DNA MER1_type 0 230 6 5498 253 29 49 chr2 125245035 125247248 -125440606 - L1MB4 LINE L1 -896 5250 3081 234 0 0 0 chr2 125247893 125247919 -125439935 + (TA)n Simple_repeat Simple_repeat 2 27 0 5865 199 16 0 chr2 125247927 125248955 -125438899 + L1PA15-16 LINE L1 1 1044 -5805 3546 139 51 91 chr2 125249055 125250377 -125437477 - pTR5 LTR ERV1 -87 1683 5 413 73 0 0 chr2 125250377 125250432 -125437422 + Alu SINE Alu 238 292 -20 4329 118 19 7 chr2 125250435 125251112 -125436742 + L1PA14 LINE L1 5476 6160 -1 24 32 0 0 chr2 125251177 125251208 -125436646 + AT_rich Low_complexity Low_complexity 1 31 0 288 319 98 83 chr2 125251409 125251757 -125436097 - L2 LINE L2 -16 3297 2945 330 247 101 0 chr2 125251987 125252076 -125435778 - L2 LINE L2 -947 2367 2270 797 155 112 0 chr2 125252395 125252582 -125435272 - L1MB3 LINE L1 -8 6175 5968 * 4197 266 46 38 chr2 125252572 125254546 -125433308 - L1M4 LINE L1 -1922 4722 2732 907 134 0 0 chr2 125254546 125254680 -125433174 + AluJo SINE Alu 1 134 -178 4156 225 104 18 chr2 125254684 125256226 -125431628 - L1M4 LINE L1 -3900 2746 1071 292 329 15 7 chr2 125256305 125256442 -125431412 - L1M4 LINE L1 -5708 938 801 318 299 36 7 chr2 125256822 125256959 -125430895 - L1M4 LINE L1 -6397 145 5 384 103 0 0 chr2 125257020 125257078 -125430776 + (TG)n Simple_repeat Simple_repeat 2 59 0 1797 106 24 106 chr2 125257317 125257648 -125430206 + AluYb8 SINE Alu 1 304 -14 382 308 54 15 chr2 125257894 125258024 -125429830 - L2 LINE L2 0 3313 3179 369 398 84 8 chr2 125258048 125258337 -125429517 - L2 LINE L2 -254 3059 2756 2078 100 28 3 chr2 125258510 125258800 -125429054 + AluY SINE Alu 1 297 -14 441 0 0 0 chr2 125258841 125258890 -125428964 + (TG)n Simple_repeat Simple_repeat 2 50 0 1957 187 38 34 chr2 125258906 125259457 -125428397 - MLT2A2 LTR ERVL 0 554 1 4834 213 19 47 chr2 125260981 125262288 -125425566 + L1MA4A LINE L1 3212 4481 -1665 225 0 0 0 chr2 125262291 125262316 -125425538 + (TC)n Simple_repeat Simple_repeat 2 26 0 207 0 0 0 chr2 125262315 125262338 -125425516 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 12125 203 19 20 chr2 125262525 125265605 -125422249 + L1PA16 LINE L1 714 3676 -3173 8303 221 7 18 chr2 125265648 125268592 -125419262 + L1PA16 LINE L1 3934 6869 0 5042 188 47 48 chr2 125268596 125269479 -125418375 + L1MA4A LINE L1 4483 5366 -937 2103 128 7 3 chr2 125269479 125269785 -125418069 + AluSg SINE Alu 1 307 -3 5042 188 47 48 chr2 125269785 125270095 -125417759 + L1MA4A LINE L1 5366 5675 -628 195 42 0 0 chr2 125270095 125270119 -125417735 + (GGAAA)n Simple_repeat Simple_repeat 2 25 0 5042 188 47 48 chr2 125270119 125270742 -125417112 + L1MA4A LINE L1 5675 6303 0 25 0 0 68 chr2 125271140 125271184 -125416670 + AT_rich Low_complexity Low_complexity 1 41 0 2159 112 0 0 chr2 125271195 125271481 -125416373 + AluSx SINE Alu 1 286 -26 312 27 0 0 chr2 125271484 125271521 -125416333 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 515 288 85 42 chr2 125271625 125271861 -125415993 + L2 LINE L2 3036 3281 -32 314 219 0 10 chr2 125271899 125271995 -125415859 + GA-rich Low_complexity Low_complexity 3 97 0 2195 87 7 7 chr2 125272074 125272373 -125415481 - AluY SINE Alu -12 299 1 445 284 0 0 chr2 125272963 125273072 -125414782 + MIR SINE MIR 81 189 -73 360 301 103 14 chr2 125273082 125273228 -125414626 + MIR SINE MIR 38 196 -66 234 0 0 0 chr2 125273332 125273358 -125414496 + (CA)n Simple_repeat Simple_repeat 2 27 0 4049 233 111 25 chr2 125274294 125274632 -125413222 + L1MC/D LINE L1 918 1225 -5157 3431 119 14 4 chr2 125274632 125275138 -125412716 + MER9 LTR ERVK 1 511 0 4049 233 111 25 chr2 125275138 125276210 -125411644 + L1MC/D LINE L1 1225 2461 -3921 1893 148 0 3 chr2 125276210 125276494 -125411360 + AluSc SINE Alu 27 309 0 4049 233 111 25 chr2 125276494 125276573 -125411281 + L1MC/D LINE L1 2461 2532 -3850 1795 206 144 8 chr2 125276673 125277187 -125410667 - L1M4c LINE L1 -4768 1616 1033 1155 266 195 34 chr2 125277190 125277781 -125410073 - L1M4c LINE L1 -5611 773 88 278 339 71 16 chr2 125277860 125278043 -125409811 + L2 LINE L2 2990 3182 -131 37978 84 12 6 chr2 125278049 125284155 -125403699 - L1PA6 LINE L1 -1 6153 11 362 330 120 27 chr2 125284663 125285139 -125402715 + L1MC/D LINE L1 4346 4865 -1517 4706 58 29 1 chr2 125285261 125286257 -125401597 - MER11A LTR ERVK -5 1261 1 358 304 116 40 chr2 125286258 125286662 -125401192 + L1MC/D LINE L1 5008 5442 -940 3320 135 13 0 chr2 125286662 125287136 -125400718 + L1PA12 LINE L1 1 480 -7101 297 174 0 0 chr2 125287147 125287193 -125400661 + L1PA12 LINE L1 1959 2004 -5577 * 20543 183 40 22 chr2 125287191 125288202 -125399652 + L1PA13 LINE L1 339 1330 -5484 197 33 33 0 chr2 125288202 125288232 -125399622 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 20543 183 40 22 chr2 125288232 125293422 -125394432 + L1PA13 LINE L1 1330 6795 -19 433 342 92 24 chr2 125293487 125293782 -125394072 + L1MC/D LINE L1 5491 5805 -597 239 287 130 9 chr2 125293800 125293915 -125393939 + L1MC/D LINE L1 5850 5978 -2066 1399 119 0 92 chr2 125294573 125294824 -125393030 + AluSg SINE Alu 1 228 -82 191 340 68 10 chr2 125295856 125295959 -125391895 - MIR3 SINE MIR -95 113 5 22 0 0 0 chr2 125296383 125296405 -125391449 + AT_rich Low_complexity Low_complexity 1 22 0 4492 173 29 29 chr2 125297221 125297841 -125390013 - MER4D LTR ERV1 0 903 281 1928 164 51 20 chr2 125297841 125298194 -125389660 - THE1B LTR MaLR 0 364 1 4492 173 29 29 chr2 125298194 125298476 -125389378 - MER4D LTR ERV1 -621 282 1 683 256 67 34 chr2 125299559 125300144 -125387710 + LTR48 LTR ERV1 5 542 0 384 345 35 0 chr2 125300396 125300512 -125387342 - L2 LINE L2 -9 3304 3185 837 294 38 23 chr2 125300530 125300877 -125386977 + L1MCb LINE L1 17 368 -5677 4296 189 23 39 chr2 125300896 125301891 -125385963 + L1MC3 LINE L1 6785 7763 -22 545 284 41 0 chr2 125301900 125302097 -125385757 + L1MCb LINE L1 1876 2080 -4484 10474 189 15 14 chr2 125302806 125305110 -125382744 + L1P4 LINE L1 3186 5491 -670 1681 114 13 0 chr2 125305110 125305347 -125382507 + AluY SINE Alu 1 240 -71 475 252 68 21 chr2 125305466 125305700 -125382154 + L1MCb LINE L1 2825 3069 -3495 * 1357 227 29 31 chr2 125305689 125306142 -125381712 + L1MCb LINE L1 4333 4784 -1780 2404 221 30 6 chr2 125306147 125306639 -125381215 + L1PA10 LINE L1 5 508 -5367 16278 151 17 12 chr2 125306656 125312422 -125375432 + L1PA10 LINE L1 738 6483 0 3879 213 43 40 chr2 125312422 125314247 -125373607 + L1MB3 LINE L1 4775 6599 -2 679 228 74 56 chr2 125314320 125314820 -125373034 - LTR48B LTR ERV1 0 644 1 2338 101 0 3 chr2 125316264 125316572 -125371282 + AluSg SINE Alu 1 307 -3 501 337 8 47 chr2 125316700 125316895 -125370959 + MIR SINE MIR 14 198 -64 411 21 0 0 chr2 125316895 125316943 -125370911 + (TA)n Simple_repeat Simple_repeat 2 49 0 501 337 8 47 chr2 125316943 125317002 -125370852 + MIR SINE MIR 198 258 -4 760 191 44 0 chr2 125317208 125317344 -125370510 - MER7A DNA MER2_type 0 337 196 2723 158 27 0 chr2 125317344 125317793 -125370061 - LTR26B LTR ERV1 0 531 71 366 118 0 0 chr2 125317893 125317944 -125369910 - LTR26B LTR ERV1 -480 51 1 * 1123 146 18 59 chr2 125317944 125318163 -125369691 - MER7A DNA MER2_type -138 208 1 292 345 9 10 chr2 125318444 125318568 -125369286 - MIR SINE MIR -68 140 32 187 379 35 35 chr2 125319409 125319525 -125368329 - L2 LINE L2 -17 3255 3140 528 96 0 0 chr2 125320159 125320232 -125367622 - 7SK RNA RNA 0 193 121 629 153 0 46 chr2 125320268 125320399 -125367455 - 7SK RNA RNA -68 125 1 2031 134 13 19 chr2 125320535 125320849 -125367005 - AluSx SINE Alu 0 312 1 394 240 124 8 chr2 125321262 125321383 -125366471 + MIR SINE MIR 62 196 -66 1602 263 28 16 chr2 125321764 125322197 -125365657 + MER74A LTR ERVL 121 558 0 252 200 17 17 chr2 125322555 125322615 -125365239 - L2 LINE L2 -219 3053 2994 396 0 0 0 chr2 125322717 125322761 -125365093 + (TAA)n Simple_repeat Simple_repeat 2 45 0 21 36 0 0 chr2 125322825 125322853 -125365001 + AT_rich Low_complexity Low_complexity 1 28 0 308 366 0 24 chr2 125323442 125323565 -125364289 - MIR SINE MIR -62 146 27 207 0 0 0 chr2 125323974 125323997 -125363857 + (TTG)n Simple_repeat Simple_repeat 2 24 0 218 306 0 0 chr2 125324538 125324587 -125363267 + L2 LINE L2 3136 3184 -88 297 315 154 0 chr2 125325611 125325741 -125362113 + MIR SINE MIR 101 250 -12 639 302 144 56 chr2 125325777 125325985 -125361869 - L2 LINE L2 0 3313 3125 2509 122 0 0 chr2 125325985 125326346 -125361508 + THE1B LTR MaLR 1 361 -3 639 302 144 56 chr2 125326346 125326742 -125361112 - L2 LINE L2 -188 3125 2765 1225 102 0 11 chr2 125326742 125326918 -125360936 - L1PA6 LINE L1 -6 6148 5975 639 302 144 56 chr2 125326918 125327180 -125360674 - L2 LINE L2 -548 2765 2381 277 355 0 9 chr2 125327555 125327662 -125360192 + MER5A DNA MER1_type 83 188 -1 23 33 0 0 chr2 125328207 125328237 -125359617 + AT_rich Low_complexity Low_complexity 1 30 0 321 303 16 0 chr2 125328667 125328789 -125359065 - MER103 DNA DNA -42 124 1 200 315 0 0 chr2 125329009 125329063 -125358791 - L2 LINE L2 -31 3282 3229 223 245 0 0 chr2 125330058 125330107 -125357747 + (CA)n Simple_repeat Simple_repeat 1 49 0 27 29 0 0 chr2 125330807 125330841 -125357013 + AT_rich Low_complexity Low_complexity 1 34 0 187 297 16 62 chr2 125333317 125333381 -125354473 + L2 LINE L2 3245 3305 -8 291 28 0 0 chr2 125333382 125333418 -125354436 + (CA)n Simple_repeat Simple_repeat 2 37 0 409 285 48 32 chr2 125333682 125333868 -125353986 + MER5A DNA MER1_type 1 189 0 464 261 72 86 chr2 125334364 125334655 -125353199 - L1M4 LINE L1 -3614 2532 2246 208 175 35 53 chr2 125334778 125334835 -125353019 + A-rich Low_complexity Low_complexity 6 61 0 231 278 37 74 chr2 125335548 125335818 -125352036 + HAL1b LINE L1 663 922 -426 365 291 123 26 chr2 125335846 125336148 -125351706 + HAL1b LINE L1 988 1318 -30 6778 158 30 11 chr2 125336218 125338587 -125349267 - L1MA2 LINE L1 0 7723 5307 1408 187 0 44 chr2 125338587 125338860 -125348994 - AluJb SINE Alu -14 298 38 16665 196 61 21 chr2 125338860 125340598 -125347256 - L1MA2 LINE L1 -2251 5314 3646 5937 147 23 30 chr2 125340598 125341676 -125346178 + MER11C LTR ERVK 1 1071 0 16665 196 61 21 chr2 125341676 125345028 -125342826 - L1MA2 LINE L1 -3919 3646 12 321 242 0 23 chr2 125345039 125345171 -125342683 + CT-rich Low_complexity Low_complexity 3 131 0 265 252 19 19 chr2 125345186 125345345 -125342509 + CT-rich Low_complexity Low_complexity 1 159 0 21 0 0 0 chr2 125345835 125345856 -125341998 + AT_rich Low_complexity Low_complexity 1 21 0 354 343 111 0 chr2 125346778 125346959 -125340895 + MIR SINE MIR 50 250 -12 505 358 48 10 chr2 125347519 125347726 -125340128 - MIR SINE MIR -29 233 19 8758 197 46 20 chr2 125348311 125348522 -125339332 - L1MA4 LINE L1 -5 7714 7510 1101 220 133 8 chr2 125348522 125348786 -125339068 - AluJo SINE Alu -5 297 1 8758 197 46 20 chr2 125348786 125352245 -125335609 - L1MA4 LINE L1 -209 7510 3146 2135 112 0 23 chr2 125352245 125352549 -125335305 - AluSg SINE Alu -13 297 1 8758 197 46 20 chr2 125352549 125352935 -125334919 - L1MA4 LINE L1 -4573 3146 2772 458 341 62 78 chr2 125354384 125354921 -125332933 - L1ME3A LINE L1 -223 5947 5420 1679 279 42 5 chr2 125355142 125355719 -125332135 - MER20B DNA MER1_type 0 783 186 189 107 0 0 chr2 125355905 125355933 -125331921 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 738 192 0 0 chr2 125355933 125356053 -125331801 - FLAM_A SINE Alu -13 120 1 248 329 138 26 chr2 125356245 125356276 -125331578 + MIR SINE MIR 3 29 -233 4921 45 2 2 chr2 125356276 125356878 -125330976 - L1PA4 LINE L1 -2 6153 5552 248 329 138 26 chr2 125356878 125357077 -125330777 + MIR SINE MIR 29 255 -7 318 26 0 0 chr2 125357499 125357538 -125330316 + (TG)n Simple_repeat Simple_repeat 2 40 0 678 328 16 11 chr2 125358825 125359008 -125328846 + MER5A DNA MER1_type 2 185 -4 567 242 174 0 chr2 125359465 125359626 -125328228 + MER5A DNA MER1_type 1 189 0 264 261 106 70 chr2 125360425 125360567 -125327287 + MIR SINE MIR 70 216 -46 484 329 30 33 chr2 125360956 125361168 -125326686 - MIR SINE MIR -36 226 19 200 261 0 0 chr2 125361667 125361713 -125326141 - L2 LINE L2 0 3313 3268 534 203 68 11 chr2 125361931 125362108 -125325746 + MER53 DNA DNA 3 189 0 180 0 0 0 chr2 125362169 125362189 -125325665 + (A)n Simple_repeat Simple_repeat 1 20 0 318 322 17 68 chr2 125362425 125362602 -125325252 - MIR SINE MIR -46 216 49 214 320 13 13 chr2 125363149 125363224 -125324630 + MIR3 SINE MIR 111 185 -23 2132 100 7 17 chr2 125363240 125363539 -125324315 + AluSp SINE Alu 3 298 -15 385 294 28 0 chr2 125363913 125364022 -125323832 + MIR SINE MIR 86 197 -65 378 94 0 0 chr2 125364447 125364511 -125323343 + (CA)n Simple_repeat Simple_repeat 2 65 0 198 310 69 28 chr2 125364873 125365018 -125322836 + L2 LINE L2 2833 2983 -289 211 211 303 0 chr2 125365203 125365279 -125322575 + L2 LINE L2 3214 3312 -1 413 308 0 0 chr2 125365565 125365682 -125322172 + MIR SINE MIR 132 248 -14 213 345 18 65 chr2 125366405 125366573 -125321281 - L2 LINE L2 -181 3091 2932 785 268 29 5 chr2 125366949 125367154 -125320700 - MER58 DNA MER1_type -130 211 2 308 278 21 10 chr2 125367169 125367266 -125320588 + MIR SINE MIR 5 102 -160 927 169 5 36 chr2 125367345 125367503 -125320351 + AluJb SINE Alu 124 276 -36 281 26 0 26 chr2 125367503 125367542 -125320312 + (CAAAA)n Simple_repeat Simple_repeat 4 41 0 927 169 5 36 chr2 125367542 125367578 -125320276 + AluJb SINE Alu 276 312 0 270 0 0 0 chr2 125367942 125367972 -125319882 + (T)n Simple_repeat Simple_repeat 1 30 0 258 308 90 15 chr2 125368327 125368460 -125319394 + MIR SINE MIR 72 214 -48 270 56 0 0 chr2 125368550 125368586 -125319268 + (TG)n Simple_repeat Simple_repeat 1 36 0 213 121 0 0 chr2 125368800 125368833 -125319021 + (TC)n Simple_repeat Simple_repeat 2 34 0 219 88 0 0 chr2 125368833 125368867 -125318987 + (CA)n Simple_repeat Simple_repeat 1 34 0 587 191 0 0 chr2 125369320 125369435 -125318419 - L1MA5 LINE L1 -8 6292 6178 735 180 104 71 chr2 125369554 125369737 -125318117 - MER20B DNA MER1_type -28 191 3 534 297 65 11 chr2 125369902 125370087 -125317767 + MIR SINE MIR 64 258 -4 209 360 103 34 chr2 125370293 125370585 -125317269 + L2 LINE L2 2924 3235 -78 356 284 34 34 chr2 125370813 125370989 -125316865 - LTR16C LTR ERVL -123 368 193 378 189 23 186 chr2 125371495 125371726 -125316128 - L1ME LINE L1 -626 5538 5346 441 145 0 0 chr2 125371736 125371812 -125316042 + (TTCC)n Simple_repeat Simple_repeat 4 79 0 251 71 0 71 chr2 125371817 125371859 -125315995 - MLT2B3 LTR ERVL -9 545 507 2197 169 30 49 chr2 125371859 125372325 -125315529 - MSTB2 LTR MaLR 0 457 1 185 132 26 0 chr2 125372327 125372365 -125315489 + (TAGA)n Simple_repeat Simple_repeat 2 40 0 389 339 50 6 chr2 125372400 125372580 -125315274 + L2 LINE L2 2778 2965 -349 186 75 0 75 chr2 125372631 125372684 -125315170 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 888 144 11 6 chr2 125372693 125372867 -125314987 + GA-rich Low_complexity Low_complexity 4 178 0 183 184 0 0 chr2 125372873 125372911 -125314943 + (TA)n Simple_repeat Simple_repeat 2 39 0 210 216 134 97 chr2 125373434 125373568 -125314286 + MIR SINE MIR 119 257 -5 1879 179 21 66 chr2 125373785 125374182 -125313672 - MSTB LTR MaLR 0 426 60 8112 196 20 20 chr2 125374182 125375766 -125312088 - MSTB-int LTR MaLR -66 1585 1 2096 181 29 36 chr2 125375766 125376180 -125311674 - MSTB LTR MaLR -2 424 14 373 340 27 7 chr2 125376600 125376747 -125311107 - MIR SINE MIR -79 183 34 281 271 24 0 chr2 125376906 125376991 -125310863 - MER103 DNA DNA -7 159 73 227 269 30 0 chr2 125377818 125377885 -125309969 + MIR SINE MIR 77 145 -63 22 0 0 0 chr2 125378586 125378608 -125309246 + AT_rich Low_complexity Low_complexity 1 22 0 204 333 35 0 chr2 125378849 125378906 -125308948 - L2 LINE L2 -1 3271 3213 302 235 0 0 chr2 125379510 125379561 -125308293 - MER91A DNA MER1_type -53 143 93 246 391 37 26 chr2 125379912 125380101 -125307753 - L2 LINE L2 -412 2902 2712 629 220 0 15 chr2 125380404 125380536 -125307318 - AluJo SINE Alu -178 134 5 1943 124 4 0 chr2 125380570 125380844 -125307010 - AluSq SINE Alu -19 294 20 12272 240 30 26 chr2 125380883 125381891 -125305963 - L1PB4 LINE L1 0 6859 5857 255 31 0 0 chr2 125381891 125381923 -125305931 + (TTG)n Simple_repeat Simple_repeat 2 33 0 12272 240 30 26 chr2 125381923 125382610 -125305244 - L1PB4 LINE L1 -1002 5857 5175 1134 29 7 0 chr2 125382610 125382748 -125305106 - L1PA3 LINE L1 -1 6154 6016 12272 240 30 26 chr2 125382748 125385769 -125302085 - L1PB4 LINE L1 -1684 5175 2342 2181 131 0 0 chr2 125385769 125386081 -125301773 - AluSx SINE Alu 0 312 1 12272 240 30 26 chr2 125386081 125387162 -125300692 - L1PB4 LINE L1 -4517 2342 1268 469 209 5 107 chr2 125387165 125387361 -125300493 - L1PBb LINE L1 -5329 875 700 204 135 0 0 chr2 125387397 125387434 -125300420 + (CA)n Simple_repeat Simple_repeat 2 38 0 945 162 5 37 chr2 125387628 125387819 -125300035 - L1 LINE L1 -1496 4650 4466 259 203 95 0 chr2 125387817 125387891 -125299963 + L1MA7 LINE L1 6210 6290 -1 * 2134 102 3 7 chr2 125388268 125388561 -125299293 - AluY SINE Alu -19 292 1 1768 152 22 2 chr2 125388561 125389033 -125298821 - L1P4 LINE L1 -670 5491 5010 193 368 51 17 chr2 125389033 125389150 -125298704 - MIR SINE MIR -123 139 19 230 255 0 0 chr2 125389216 125389263 -125298591 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 3565 167 35 6 chr2 125389267 125389925 -125297929 + Tigger2 DNA MER2_type 2 678 -2040 895 208 19 43 chr2 125389925 125390132 -125297722 + Tigger2 DNA MER2_type 2517 2718 0 1460 218 28 32 chr2 125390144 125390558 -125297296 + L1MB7 LINE L1 5754 6165 -19 732 226 199 36 chr2 125390631 125390937 -125296917 + L1MC4 LINE L1 7687 8042 0 21 57 0 0 chr2 125391312 125391347 -125296507 + AT_rich Low_complexity Low_complexity 1 35 0 244 224 164 0 chr2 125391882 125391949 -125295905 - MIR SINE MIR -1 261 184 589 326 22 13 chr2 125392092 125392316 -125295538 + L1MDa LINE L1 105 330 -6210 1699 258 50 46 chr2 125393095 125394535 -125293319 + L1MDa LINE L1 1990 3436 -3104 * 15823 162 30 72 chr2 125394530 125397916 -125289938 + L1MA1 LINE L1 12 3252 -4313 500 183 0 0 chr2 125397922 125398004 -125289850 + AluJ/FLAM SINE Alu 3 84 -228 14734 175 23 8 chr2 125398034 125399207 -125288647 + L1MA1 LINE L1 3238 4393 -3328 1575 145 102 44 chr2 125399207 125399551 -125288303 - THE1B LTR MaLR 0 364 1 14734 175 23 8 chr2 125399551 125401761 -125286093 + L1MA1 LINE L1 4393 6702 -1019 2718 13 3 0 chr2 125401761 125402067 -125285787 + AluYa5 SINE Alu 1 307 -4 14734 175 23 8 chr2 125402067 125403102 -125284752 + L1MA1 LINE L1 6702 7721 0 715 278 72 18 chr2 125403109 125403552 -125284302 + L1MDa LINE L1 3422 3888 -2652 1661 75 18 0 chr2 125403561 125403845 -125284009 - L1P4 LINE L1 -680 5481 5194 296 71 0 0 chr2 125403840 125403882 -125283972 + L1PA14 LINE L1 6120 6161 0 * 1797 221 48 58 chr2 125403914 125404530 -125283324 + L1MDa LINE L1 3917 4557 -1983 465 235 53 53 chr2 125404669 125404839 -125283015 + L1MDa LINE L1 4518 4687 -1853 947 181 0 80 chr2 125405024 125405164 -125282690 + L1MD1 LINE L1 6016 6133 -109 1824 174 40 11 chr2 125405164 125405543 -125282311 - MLT1B LTR MaLR 0 390 1 947 181 0 80 chr2 125405543 125405628 -125282226 + L1MD1 LINE L1 6133 6223 -19 1237 244 21 48 chr2 125405851 125406241 -125281613 + MLT2D LTR ERVL 1 480 -40 200 250 18 0 chr2 125406257 125406313 -125281541 + (TA)n Simple_repeat Simple_repeat 1 57 0 256 167 0 0 chr2 125406313 125406361 -125281493 + MLT2D LTR ERVL 473 520 0 188 282 90 26 chr2 125406704 125406782 -125281072 + L2 LINE L2 3150 3232 -40 249 152 0 0 chr2 125406842 125406888 -125280966 + LTR66 LTR ERVL 394 439 -171 234 260 0 62 chr2 125407031 125407127 -125280727 - L1MC4 LINE L1 -1339 6703 6614 191 250 0 16 chr2 125407131 125407195 -125280659 + (TA)n Simple_repeat Simple_repeat 1 63 0 310 322 0 0 chr2 125407196 125407286 -125280568 - L1MC4 LINE L1 -1339 6703 6614 * 322 214 21 11 chr2 125407208 125407302 -125280552 + L1MC4 LINE L1 1995 6983 -1339 444 241 0 0 chr2 125407303 125407419 -125280435 + (TATATG)n Simple_repeat Simple_repeat 5 120 0 33 43 0 0 chr2 125410104 125410151 -125277703 + AT_rich Low_complexity Low_complexity 1 47 0 4945 180 20 19 chr2 125410151 125411505 -125276349 - L1MA7 LINE L1 -44 6247 4896 559 270 200 11 chr2 125411796 125412236 -125275618 + LTR50 LTR ERVL 1 586 -209 1228 217 28 6 chr2 125412633 125412960 -125274894 + L1MB7 LINE L1 4280 4613 -1533 4128 191 21 22 chr2 125413030 125414545 -125273309 + L1P5 LINE L1 4266 5784 -370 3506 234 55 11 chr2 125414540 125415912 -125271942 + L1MB7 LINE L1 4750 6184 0 * 316 340 20 7 chr2 125417188 125417338 -125270516 - MIR SINE MIR -105 157 6 769 264 144 11 chr2 125417340 125417700 -125270154 - MLT1I LTR MaLR -1 408 1 330 67 0 0 chr2 125417828 125417873 -125269981 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 1747 131 42 42 chr2 125418303 125418609 -125269245 - AluSg SINE Alu -4 306 1 192 77 0 0 chr2 125418956 125418982 -125268872 + (TTTTTA)n Simple_repeat Simple_repeat 2 27 0 356 227 113 35 chr2 125419522 125419564 -125268290 + MER112 DNA MER1_type 103 140 -120 2017 87 66 21 chr2 125419564 125419852 -125268002 - AluY SINE Alu -10 301 1 356 227 113 35 chr2 125419852 125419950 -125267904 + MER112 DNA MER1_type 140 254 -6 241 218 168 0 chr2 125421235 125421336 -125266518 - MER5C DNA MER1_type -200 124 7 455 179 23 46 chr2 125421744 125421917 -125265937 + GA-rich Low_complexity Low_complexity 2 170 0 229 244 0 0 chr2 125421921 125421962 -125265892 + polypurine Low_complexity Low_complexity 4 44 0 2051 185 49 31 chr2 125422660 125423113 -125264741 - LOR1b LTR ERV1 0 461 1 226 310 54 131 chr2 125423120 125423549 -125264305 + L2 LINE L2 2872 3267 -5 409 242 0 11 chr2 125423630 125423721 -125264133 - MIR SINE MIR -130 132 43 1183 173 33 0 chr2 125424432 125424646 -125263208 + AluJb SINE Alu 86 306 -6 331 349 99 14 chr2 125425726 125425938 -125261916 - MIR SINE MIR -1 261 32 21 0 0 0 chr2 125425976 125425997 -125261857 + AT_rich Low_complexity Low_complexity 1 21 0 196 135 19 19 chr2 125426358 125426410 -125261444 + GA-rich Low_complexity Low_complexity 2 53 0 1851 94 102 15 chr2 125426528 125426793 -125261061 + AluY SINE Alu 1 288 -23 2017 201 175 43 chr2 125426967 125427480 -125260374 + LTR69 LTR ERVL 1 581 -7 451 344 76 11 chr2 125427602 125427878 -125259976 - L3 LINE CR1 -5 1572 1279 2122 159 35 32 chr2 125428001 125428551 -125259303 - MLT2A2 LTR ERVL 0 554 1 1495 302 33 17 chr2 125429530 125430245 -125257609 - L2 LINE L2 -119 3194 2471 279 305 42 11 chr2 125430367 125430462 -125257392 - MIR3 SINE MIR -1 207 110 2170 133 51 20 chr2 125430677 125431030 -125256824 + THE1B LTR MaLR 1 364 0 5176 122 25 8 chr2 125431030 125432315 -125255539 + THE1B-int LTR MaLR 1 1580 0 2287 116 48 20 chr2 125432315 125432669 -125255185 + THE1B LTR MaLR 1 364 0 360 258 38 86 chr2 125432680 125432866 -125254988 - L1ME3A LINE L1 -322 5848 5672 201 219 31 0 chr2 125433241 125433305 -125254549 + (TAA)n Simple_repeat Simple_repeat 2 67 0 547 276 138 5 chr2 125433320 125433530 -125254324 + MIR SINE MIR 3 240 -22 815 215 25 6 chr2 125434938 125435101 -125252753 + FRAM SINE Alu 1 166 0 2027 53 3 39 chr2 125435470 125435754 -125252100 - AluY SINE Alu -2 309 36 1978 280 63 36 chr2 125435764 125437213 -125250641 + L1ME1 LINE L1 1013 2501 -4039 1033 253 30 27 chr2 125437236 125437532 -125250322 + LTR40a LTR ERVL 205 501 -18 4664 265 68 33 chr2 125437542 125438129 -125249725 + L1ME1 LINE L1 2719 3284 -3276 1178 196 0 17 chr2 125438129 125438369 -125249485 - MER46A DNA MER2_type 0 236 1 4664 265 68 33 chr2 125438369 125441370 -125246484 + L1ME1 LINE L1 3284 6509 -51 485 304 71 0 chr2 125441792 125441976 -125245878 + MIR SINE MIR 62 258 -4 1276 149 136 145 chr2 125441977 125442486 -125245368 + MLT1D LTR MaLR 2 505 0 402 325 61 22 chr2 125442621 125442852 -125245002 + MIR SINE MIR 9 248 -14 1217 88 0 0 chr2 125442922 125443081 -125244773 + L1PA8A LINE L1 5946 6104 -27 23 0 0 0 chr2 125443609 125443632 -125244222 + AT_rich Low_complexity Low_complexity 1 23 0 531 213 132 51 chr2 125443736 125443933 -125243921 - Tigger1 DNA MER2_type 0 2418 2206 6273 141 2 26 chr2 125443952 125445034 -125242820 + L1P LINE L1 1921 2976 -3170 6904 159 23 12 chr2 125445509 125446710 -125241144 + Tigger1 DNA MER2_type 2 1216 -1202 568 222 17 0 chr2 125446712 125446829 -125241025 + Tigger1 DNA MER2_type 2103 2221 -197 207 0 0 0 chr2 125446831 125446854 -125241000 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 230 398 51 0 chr2 125447013 125447111 -125240743 + L2 LINE L2 3116 3218 -54 879 161 0 0 chr2 125447132 125447287 -125240567 - L1MA4 LINE L1 -2 6298 6144 2671 100 9 38 chr2 125447384 125447803 -125240051 - L1PB1 LINE L1 -3 6148 5742 700 194 150 0 chr2 125447841 125448021 -125239833 + Tigger1 DNA MER2_type 2211 2417 -1 1372 186 88 42 chr2 125448152 125448506 -125239348 + MLT1A2 LTR MaLR 1 461 -6 182 233 0 0 chr2 125448541 125448584 -125239270 + L2 LINE L2 2935 2977 -336 537 218 34 77 chr2 125448597 125448829 -125239025 - Charlie5 DNA MER1_type -134 2478 2 314 350 45 77 chr2 125449030 125449341 -125238513 + L2 LINE L2 2972 3272 0 324 364 23 23 chr2 125449809 125449941 -125237913 + MIR SINE MIR 17 148 -114 3038 108 16 2 chr2 125450459 125450887 -125236967 - MER57B LTR ERV1 0 434 1 492 48 0 0 chr2 125451840 125451903 -125235951 + (CA)n Simple_repeat Simple_repeat 2 64 0 26 0 0 0 chr2 125452050 125452076 -125235778 + AT_rich Low_complexity Low_complexity 1 26 0 187 295 42 21 chr2 125452104 125452199 -125235655 + L2 LINE L2 3208 3304 -9 299 297 97 58 chr2 125452487 125452653 -125235201 - MIR SINE MIR -62 146 3 223 316 75 53 chr2 125453556 125453689 -125234165 + MIR SINE MIR 16 151 -57 281 278 33 11 chr2 125453689 125453779 -125234075 + MER5B DNA MER1_type 7 98 -80 22 0 0 0 chr2 125454558 125454580 -125233274 + AT_rich Low_complexity Low_complexity 1 22 0 1719 180 3 17 chr2 125455009 125455303 -125232551 + AluJo SINE Alu 1 290 -22 589 339 25 4 chr2 125455381 125455623 -125232231 + MIR SINE MIR 9 255 -7 291 419 16 0 chr2 125456107 125456236 -125231618 - L2 LINE L2 -10 3262 3132 280 342 31 6 chr2 125456480 125456641 -125231213 - L2 LINE L2 -479 2835 2671 25 0 0 0 chr2 125456817 125456842 -125231012 + AT_rich Low_complexity Low_complexity 1 25 0 465 335 111 55 chr2 125456873 125457476 -125230378 - L2 LINE L2 -963 2351 1715 23 33 0 0 chr2 125459898 125459928 -125227926 + AT_rich Low_complexity Low_complexity 1 30 0 261 340 173 0 chr2 125459953 125460115 -125227739 - MIR SINE MIR -12 250 61 2232 97 3 7 chr2 125460117 125460417 -125227437 - AluSg SINE Alu -11 299 1 23 0 0 0 chr2 125461397 125461420 -125226434 + AT_rich Low_complexity Low_complexity 1 23 0 316 258 17 33 chr2 125461714 125461834 -125226020 - L1ME LINE L1 -452 5669 5552 277 308 79 41 chr2 125461915 125462143 -125225711 - MIR SINE MIR -16 246 11 231 242 30 15 chr2 125462337 125462403 -125225451 - MIR3 SINE MIR -23 185 119 1652 176 3 26 chr2 125466580 125466892 -125220962 - AluJo SINE Alu -7 305 1 209 302 81 0 chr2 125467613 125467699 -125220155 + L2 LINE L2 2994 3086 -186 2375 95 0 0 chr2 125467990 125468295 -125219559 + AluY SINE Alu 1 305 -6 370 117 0 0 chr2 125468313 125468373 -125219481 + L1MC4 LINE L1 7979 8038 -4 24 0 0 0 chr2 125468693 125468717 -125219137 + AT_rich Low_complexity Low_complexity 1 24 0 300 219 31 0 chr2 125468810 125468874 -125218980 - MER58 DNA MER1_type 0 2420 2355 590 99 14 155 chr2 125468875 125469017 -125218837 - AluSg/x SINE Alu -3 306 185 689 271 28 39 chr2 125469021 125469305 -125218549 - MER58 DNA MER1_type -2138 282 2 202 111 0 28 chr2 125470304 125470340 -125217514 + (CA)n Simple_repeat Simple_repeat 2 36 0 289 385 29 19 chr2 125470409 125470617 -125217237 + MIR SINE MIR 32 241 -21 21 0 0 0 chr2 125471233 125471254 -125216600 + AT_rich Low_complexity Low_complexity 1 21 0 277 350 35 7 chr2 125471513 125471656 -125216198 - MIR SINE MIR -56 206 60 189 274 73 73 chr2 125472482 125472606 -125215248 + MIR SINE MIR 69 146 -62 552 322 75 38 chr2 125473674 125474047 -125213807 + L1ME3A LINE L1 5494 5880 -290 22 70 0 0 chr2 125475953 125475996 -125211858 + GC_rich Low_complexity Low_complexity 1 43 0 263 246 0 0 chr2 125477902 125477959 -125209895 + CT-rich Low_complexity Low_complexity 3 59 0 217 51 51 0 chr2 125479035 125479074 -125208780 + (TG)n Simple_repeat Simple_repeat 1 41 0 231 174 0 65 chr2 125479469 125479515 -125208339 + MIR SINE MIR 32 74 -134 196 171 24 0 chr2 125480782 125480823 -125207031 + MIR SINE MIR 65 106 -156 213 300 17 14 chr2 125481110 125481204 -125206650 - MIR SINE MIR -65 143 49 186 43 0 0 chr2 125481883 125481906 -125205948 + (CA)n Simple_repeat Simple_repeat 2 24 0 222 289 175 41 chr2 125482780 125482974 -125204880 - L2 LINE L2 -61 3252 3033 367 329 133 12 chr2 125483013 125483262 -125204592 - L2 LINE L2 -433 2881 2603 254 29 29 0 chr2 125485739 125485774 -125202080 + (TCCCC)n Simple_repeat Simple_repeat 3 38 0 323 321 0 22 chr2 125486075 125486209 -125201645 + CT-rich Low_complexity Low_complexity 2 132 0 2878 10 0 0 chr2 125486658 125486972 -125200882 - AluYb8 SINE Alu -4 314 1 373 342 39 7 chr2 125487501 125487656 -125200198 - MIR SINE MIR -85 177 18 2518 167 8 6 chr2 125488122 125488590 -125199264 + L1MA7 LINE L1 5684 6155 -136 367 163 12 0 chr2 125488590 125488669 -125199185 + L1MA8 LINE L1 6202 6288 -3 390 143 0 0 chr2 125491332 125491409 -125196445 + (TG)n Simple_repeat Simple_repeat 2 78 0 716 211 35 92 chr2 125492337 125492564 -125195290 + MER20 DNA MER1_type 2 215 -4 24 0 0 29 chr2 125492611 125492627 -125195227 + AT_rich Low_complexity Low_complexity 1 16 -18 1935 141 3 0 chr2 125492627 125492911 -125194943 - AluSx SINE Alu -27 285 1 24 0 0 29 chr2 125492911 125492929 -125194925 + AT_rich Low_complexity Low_complexity 16 34 0 487 0 32 0 chr2 125493528 125493591 -125194263 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 738 308 62 68 chr2 125493889 125494421 -125193433 - L3 LINE CR1 0 1577 1049 374 332 82 14 chr2 125494928 125495136 -125192718 - MIR SINE MIR -24 238 17 193 306 0 16 chr2 125495223 125495285 -125192569 - L2 LINE L2 -4 3309 3249 387 0 0 0 chr2 125495644 125495687 -125192167 + (CA)n Simple_repeat Simple_repeat 2 44 0 1894 129 7 11 chr2 125496039 125496319 -125191535 - AluSx SINE Alu 0 312 34 396 305 179 11 chr2 125497869 125498059 -125189795 - MIR SINE MIR -8 254 33 302 229 34 93 chr2 125498097 125498215 -125189639 - MIR SINE MIR -62 146 36 247 268 0 0 chr2 125498692 125498748 -125189106 + (CA)n Simple_repeat Simple_repeat 1 56 0 330 298 201 0 chr2 125500318 125500464 -125187390 + MIR SINE MIR 29 198 -61 1735 194 11 27 chr2 125500481 125500848 -125187006 - MLT1A1 LTR MaLR -4 361 1 1887 161 3 6 chr2 125500939 125501250 -125186604 + AluJb SINE Alu 1 310 -2 259 320 133 0 chr2 125502449 125502577 -125185277 + MIR SINE MIR 110 254 -8 948 237 65 45 chr2 125502641 125502949 -125184905 - MER5C DNA MER1_type -7 317 4 335 317 52 65 chr2 125503498 125503788 -125184066 + L2 LINE L2 2804 3089 -183 327 291 82 66 chr2 125504243 125504439 -125183415 + MIR SINE MIR 32 230 -32 216 226 140 65 chr2 125505769 125505862 -125181992 + MIR SINE MIR 107 206 -56 237 301 28 56 chr2 125507023 125507102 -125180752 + MIR SINE MIR 70 146 -116 2051 80 0 70 chr2 125507102 125507440 -125180414 + AluY SINE Alu 1 317 0 237 301 28 56 chr2 125507440 125507502 -125180352 + MIR SINE MIR 146 208 -54 192 353 7 29 chr2 125507550 125507689 -125180165 + L2 LINE L2 1959 2094 -1220 2240 86 0 23 chr2 125508041 125508345 -125179509 - AluY SINE Alu -14 297 1 249 97 32 118 chr2 125508491 125508584 -125179270 + L1MA2 LINE L1 5973 6057 -247 822 119 26 53 chr2 125508584 125508735 -125179119 + L1MA3 LINE L1 6155 6301 -4 34 24 0 0 chr2 125508736 125508777 -125179077 + AT_rich Low_complexity Low_complexity 1 41 0 186 304 43 14 chr2 125508842 125508911 -125178943 - MER5A DNA MER1_type -2 187 117 216 401 78 35 chr2 125513064 125513383 -125174471 + L2 LINE L2 2925 3257 -15 265 383 28 14 chr2 125514000 125514141 -125173713 + MIR3 SINE MIR 25 167 -41 216 265 59 59 chr2 125514362 125514464 -125173390 - L2 LINE L2 -1 3312 3211 234 328 62 28 chr2 125514823 125515000 -125172854 + MLT1L LTR MaLR 432 614 -1 355 315 60 30 chr2 125515130 125515330 -125172524 + L2 LINE L2 2470 2675 -639 234 303 119 97 chr2 125515443 125515846 -125172008 + L2 LINE L2 2825 3236 -36 25 65 0 0 chr2 125517403 125517449 -125170405 + AT_rich Low_complexity Low_complexity 1 46 0 1462 233 93 35 chr2 125517936 125518387 -125169467 - MLT1D LTR MaLR -2 503 27 4810 197 24 18 chr2 125518769 125520512 -125167342 + L1MA2 LINE L1 18 1870 -5695 * 13987 166 27 20 chr2 125520496 125525252 -125162602 + L1MA2 LINE L1 2940 7723 0 248 128 0 21 chr2 125525544 125525591 -125162263 + (CAT)n Simple_repeat Simple_repeat 3 48 0 4839 200 24 12 chr2 125525725 125526752 -125161102 - Tigger6a DNA MER2_type -42 1041 2 200 374 17 9 chr2 125526755 125526870 -125160984 - MIR SINE MIR -93 169 54 260 273 39 97 chr2 125527667 125527821 -125160033 + MIR SINE MIR 62 206 -56 220 278 0 19 chr2 125529208 125529262 -125158592 + MIR SINE MIR 42 94 -168 405 271 57 28 chr2 125529481 125529658 -125158196 - LTR16C LTR ERVL -24 467 286 404 327 0 0 chr2 125529952 125530062 -125157792 - MIR SINE MIR -133 129 20 406 239 58 104 chr2 125530302 125530561 -125157293 - MER112 DNA MER1_type -13 247 1 414 314 208 14 chr2 125530568 125530775 -125157079 + MIR SINE MIR 16 262 0 457 345 78 0 chr2 125532049 125532240 -125155614 - L3 LINE CR1 -280 1297 1092 3866 190 67 69 chr2 125532509 125532822 -125155032 - L1MD1 LINE L1 -2 6634 6322 2584 62 0 0 chr2 125532822 125533128 -125154726 + AluY SINE Alu 1 306 -5 3866 190 67 69 chr2 125533128 125533823 -125154031 - L1MD1 LINE L1 -314 6322 5627 1853 126 7 41 chr2 125533823 125534139 -125153715 + AluSg SINE Alu 1 306 0 3866 190 67 69 chr2 125534139 125535026 -125152828 - L1MD1 LINE L1 -1009 5627 4643 1698 170 7 14 chr2 125535028 125535322 -125152532 - AluJb SINE Alu -17 295 4 202 278 9 9 chr2 125535352 125535467 -125152387 + (TA)n Simple_repeat Simple_repeat 2 116 0 933 266 127 27 chr2 125535535 125535681 -125152173 - L1MD1 LINE L1 -2527 4013 3883 2459 81 0 3 chr2 125535681 125535989 -125151865 - AluSg SINE Alu -3 307 1 933 266 127 27 chr2 125535989 125536426 -125151428 - L1MD1 LINE L1 -2657 3883 3391 5742 246 78 25 chr2 125536545 125537475 -125150379 - L1MD1 LINE L1 -3696 2848 1969 2158 113 0 3 chr2 125537475 125537768 -125150086 + AluSc SINE Alu 1 292 -17 5742 246 78 25 chr2 125537768 125539314 -125148540 - L1MD1 LINE L1 -4575 1969 3 424 282 100 18 chr2 125539356 125539526 -125148328 - MIR SINE MIR -43 219 36 223 318 68 38 chr2 125540810 125540942 -125146912 - MIR SINE MIR -106 156 21 208 364 68 0 chr2 125542191 125542279 -125145575 - MIR SINE MIR -112 150 57 656 230 115 5 chr2 125542332 125542523 -125145331 - MER58C DNA MER1_type 0 215 4 313 288 25 68 chr2 125542528 125542691 -125145163 - MIR3 SINE MIR -51 157 2 584 276 86 4 chr2 125543194 125543426 -125144428 + MIR SINE MIR 12 262 0 223 352 89 13 chr2 125544279 125544438 -125143416 + MIR SINE MIR 5 177 -63 325 78 2 0 chr2 125545021 125545069 -125142785 - L1PA8 LINE L1 -465 5689 5647 3687 70 10 0 chr2 125545069 125545554 -125142300 + L1PA8 LINE L1 5678 6168 -4 571 286 84 31 chr2 125545841 125546068 -125141786 - MIR SINE MIR -6 256 18 34 0 0 0 chr2 125546725 125546759 -125141095 + AT_rich Low_complexity Low_complexity 1 34 0 1975 128 3 3 chr2 125546759 125547041 -125140813 - AluSx SINE Alu -30 282 1 426 365 54 10 chr2 125547156 125547359 -125140495 - MIR SINE MIR -50 212 1 2147 170 13 53 chr2 125547705 125547783 -125140071 - Tigger2a DNA MER2_type -2274 434 354 2492 57 0 16 chr2 125547783 125548099 -125139755 + AluY SINE Alu 1 311 0 2147 170 13 53 chr2 125548099 125548472 -125139382 - Tigger2a DNA MER2_type -2354 354 1 659 256 91 31 chr2 125548512 125548756 -125139098 - MIR SINE MIR -1 261 12 198 0 0 0 chr2 125548765 125548787 -125139067 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 193 327 103 74 chr2 125549139 125549506 -125138348 + L2 LINE L2 2857 3234 -38 2148 175 38 14 chr2 125549616 125550034 -125137820 - MSTA LTR MaLR 0 428 1 1899 168 111 5 chr2 125550035 125550422 -125137432 - MSTA LTR MaLR 0 428 1 2000 164 3 0 chr2 125550621 125550926 -125136928 + AluSx SINE Alu 1 306 -6 273 285 98 41 chr2 125551292 125551415 -125136439 - MIR SINE MIR -115 147 18 336 219 7 136 chr2 125552423 125552578 -125135276 + MIR3 SINE MIR 10 144 -64 571 242 13 26 chr2 125552773 125552926 -125134928 + MIR SINE MIR 112 262 0 257 204 56 0 chr2 125553006 125553060 -125134794 + Tigger3(Golem) DNA MER2_type 1 57 -2972 1413 156 41 0 chr2 125553162 125553405 -125134449 + Tigger3(Golem) DNA MER2_type 2776 3028 -1 184 156 56 0 chr2 125553466 125553556 -125134298 + (TA)n Simple_repeat Simple_repeat 2 96 0 21 71 0 0 chr2 125553564 125553606 -125134248 + AT_rich Low_complexity Low_complexity 1 42 0 230 127 56 0 chr2 125553621 125553692 -125134162 + (TA)n Simple_repeat Simple_repeat 2 76 0 230 315 31 71 chr2 125553692 125553819 -125134035 + L2 LINE L2 1708 1829 -1485 242 237 72 10 chr2 125553879 125553976 -125133878 - L1MC5 LINE L1 -151 7810 7708 203 321 0 0 chr2 125554173 125554226 -125133628 + L2 LINE L2 1890 1942 -1372 1290 273 34 10 chr2 125554685 125555102 -125132752 - L1MC4a LINE L1 -1871 5937 5511 326 286 91 65 chr2 125555348 125555624 -125132230 - L1MC4a LINE L1 -3274 2872 2590 276 181 53 53 chr2 125555726 125555820 -125132034 - MLT2E LTR ERVL -63 565 472 2877 259 39 10 chr2 125555836 125556611 -125131243 + MER21B LTR ERV1 13 809 -54 1155 293 116 7 chr2 125556633 125557046 -125130808 - MLT2E LTR ERVL -161 467 10 3276 138 2 12 chr2 125557317 125557826 -125130028 - MER4A LTR ERV1 0 664 161 1697 310 91 10 chr2 125558785 125559532 -125128322 + MER45C DNA AcHobo 110 952 -1 21 0 0 0 chr2 125560107 125560128 -125127726 + AT_rich Low_complexity Low_complexity 1 21 0 438 298 111 5 chr2 125560178 125560376 -125127478 - MIR SINE MIR -14 248 30 288 207 230 15 chr2 125560421 125560556 -125127298 - MIR SINE MIR -13 249 86 21 36 0 0 chr2 125562163 125562191 -125125663 + AT_rich Low_complexity Low_complexity 1 28 0 515 264 145 45 chr2 125562529 125562866 -125124988 + L1ME LINE L1 5401 5771 -391 378 230 54 126 chr2 125563043 125563121 -125124733 - L1M4 LINE L1 -802 5344 5262 315 0 0 0 chr2 125563121 125563156 -125124698 + (TG)n Simple_repeat Simple_repeat 2 36 0 378 230 54 126 chr2 125563156 125563316 -125124538 - L1M4 LINE L1 -884 5262 5123 1382 276 64 53 chr2 125563359 125564600 -125123254 - L1M4 LINE L1 -1101 5045 3792 230 232 73 0 chr2 125564766 125564848 -125123006 - L1ME3A LINE L1 -2 6168 6081 1294 176 156 0 chr2 125565265 125565411 -125122443 - AluJb SINE Alu -10 302 180 315 0 0 0 chr2 125565411 125565446 -125122408 + (TG)n Simple_repeat Simple_repeat 2 36 0 1294 176 156 0 chr2 125565446 125565555 -125122299 - AluJb SINE Alu -132 180 7 200 250 0 0 chr2 125565600 125565640 -125122214 + MIR SINE MIR 217 256 -6 461 302 132 25 chr2 125566828 125567063 -125120791 + L2 LINE L2 3041 3300 -13 289 254 0 16 chr2 125567398 125567461 -125120393 - MER5A DNA MER1_type -33 156 95 812 151 0 16 chr2 125567469 125567595 -125120259 + AluJo SINE Alu 50 173 -139 204 235 272 25 chr2 125568477 125568558 -125119296 - MIR SINE MIR -160 102 2 407 295 65 107 chr2 125568622 125569053 -125118801 + L2 LINE L2 2879 3291 -22 663 207 0 0 chr2 125569243 125569364 -125118490 + FLAM_C SINE Alu 1 121 -12 668 186 84 18 chr2 125569540 125569707 -125118147 - MER5B DNA MER1_type 0 178 1 384 103 0 0 chr2 125570752 125570810 -125117044 + (CA)n Simple_repeat Simple_repeat 1 58 0 186 316 101 22 chr2 125572315 125572382 -125115472 - MIR SINE MIR -93 169 109 276 53 0 0 chr2 125572382 125572420 -125115434 + (CA)n Simple_repeat Simple_repeat 2 39 0 186 316 101 22 chr2 125572420 125572491 -125115363 - MIR SINE MIR -153 109 20 22 35 0 0 chr2 125572509 125572538 -125115316 + AT_rich Low_complexity Low_complexity 1 29 0 38551 71 6 3 chr2 125572571 125578693 -125109161 + L1PA5 LINE L1 11 6154 0 195 242 133 67 chr2 125579023 125579143 -125108711 + MIR SINE MIR 79 206 -56 404 262 131 7 chr2 125580986 125581131 -125106723 - MIR SINE MIR -71 191 29 207 280 0 0 chr2 125582284 125582334 -125105520 - MIR SINE MIR -3 259 210 207 209 0 0 chr2 125582597 125582640 -125105214 + (TAA)n Simple_repeat Simple_repeat 1 43 0 237 333 108 8 chr2 125584480 125584609 -125103245 + MIR SINE MIR 48 189 -73 1722 186 6 25 chr2 125585970 125586331 -125101523 - MER47A DNA MER2_type -12 354 1 254 302 68 98 chr2 125586585 125586790 -125101064 + L2 LINE L2 3033 3231 -41 279 0 0 0 chr2 125588884 125588915 -125098939 + (CA)n Simple_repeat Simple_repeat 2 32 0 40947 34 23 2 chr2 125589396 125594913 -125092941 + L1P1 LINE L1 1 5638 -517 4619 50 0 0 chr2 125595016 125595590 -125092264 + L1PA2 LINE L1 5582 6155 0 318 87 0 0 chr2 125595595 125595641 -125092213 + (A)n Simple_repeat Simple_repeat 1 46 0 415 298 61 27 chr2 125596205 125596467 -125091387 + L1ME4a LINE L1 5615 5885 -236 180 273 239 11 chr2 125596657 125596745 -125091109 - L2 LINE L2 -20 3252 3145 617 236 88 64 chr2 125597024 125597321 -125090533 - MER46C DNA MER2_type -27 311 8 21 57 0 0 chr2 125597905 125597940 -125089914 + AT_rich Low_complexity Low_complexity 1 35 0 763 106 0 0 chr2 125598003 125598116 -125089738 + AluY SINE Alu 197 309 -2 203 289 22 33 chr2 125598179 125598269 -125089585 + L2 LINE L2 3195 3283 -30 367 43 71 0 chr2 125598293 125598363 -125089491 + (TA)n Simple_repeat Simple_repeat 1 75 0 248 279 13 45 chr2 125598436 125598590 -125089264 + (TATATG)n Simple_repeat Simple_repeat 2 150 0 * 340 323 8 8 chr2 125598525 125598658 -125089196 + (TA)n Simple_repeat Simple_repeat 2 134 0 229 151 38 0 chr2 125598659 125598712 -125089142 - L1MC4 LINE L1 -1339 6703 6649 198 0 0 0 chr2 125599177 125599199 -125088655 + (A)n Simple_repeat Simple_repeat 1 22 0 1461 179 29 118 chr2 125600233 125600641 -125087213 - MLT1A2 LTR MaLR -2 372 1 186 385 33 11 chr2 125600721 125600812 -125087042 - L2 LINE L2 -2 3270 3178 320 312 110 0 chr2 125601203 125601312 -125086542 + MIR SINE MIR 17 137 -125 577 318 59 0 chr2 125602045 125602245 -125085609 - MIR SINE MIR -5 257 43 22 0 0 0 chr2 125603042 125603064 -125084790 + AT_rich Low_complexity Low_complexity 1 22 0 196 265 15 44 chr2 125603071 125603139 -125084715 + MIR SINE MIR 6 71 -191 1545 195 19 55 chr2 125603163 125603376 -125084478 - MLT1A1 LTR MaLR 0 365 171 2218 113 0 10 chr2 125603376 125603685 -125084169 - AluSx SINE Alu -6 306 1 1545 195 19 55 chr2 125603685 125603850 -125084004 - MLT1A1 LTR MaLR -194 171 1 333 271 139 51 chr2 125604027 125604422 -125083432 - LTR16C LTR ERVL -3 488 59 675 276 12 0 chr2 125604557 125604727 -125083127 + MER5B DNA MER1_type 1 172 -6 825 311 8 64 chr2 125604735 125605095 -125082759 - L3 LINE CR1 -60 1517 1178 212 86 29 0 chr2 125605214 125605249 -125082605 + (TG)n Simple_repeat Simple_repeat 2 37 0 2012 123 24 0 chr2 125606268 125606561 -125081293 - AluSx SINE Alu -12 300 1 633 270 74 27 chr2 125606578 125606811 -125081043 + MIR SINE MIR 20 260 -2 503 306 47 10 chr2 125607783 125607976 -125079878 + MLT1L LTR MaLR 401 600 -15 1079 214 69 36 chr2 125608049 125608381 -125079473 + MER2 DNA MER2_type 1 343 -1 1330 172 14 9 chr2 125609058 125609279 -125078575 - MER58A DNA MER1_type -2 222 1 482 260 20 55 chr2 125609314 125609460 -125078394 + MIR3 SINE MIR 59 199 -9 687 240 176 40 chr2 125609782 125610094 -125077760 - MLT2B1 LTR ERVL 0 452 165 252 240 91 58 chr2 125610975 125611096 -125076758 - MIR SINE MIR -66 142 18 368 262 208 12 chr2 125611827 125611995 -125075859 + MIR SINE MIR 54 254 -8 478 311 62 10 chr2 125612048 125612241 -125075613 - MIR SINE MIR -15 247 45 230 294 10 59 chr2 125612857 125612959 -125074895 - MIR3 SINE MIR -6 202 106 243 286 159 16 chr2 125613908 125614034 -125073820 - L2 LINE L2 -3 3310 3167 384 352 115 23 chr2 125614280 125614646 -125073208 - L2 LINE L2 -270 3043 2640 318 313 87 41 chr2 125614955 125615150 -125072704 + MIR SINE MIR 15 218 -44 384 273 107 27 chr2 125615157 125615307 -125072547 + MIR SINE MIR 68 229 -33 214 250 73 0 chr2 125617790 125617858 -125069996 + MIR SINE MIR 120 192 -70 21 57 0 0 chr2 125620007 125620042 -125067812 + AT_rich Low_complexity Low_complexity 1 35 0 29 47 0 0 chr2 125622008 125622051 -125065803 + AT_rich Low_complexity Low_complexity 1 43 0 1573 192 10 13 chr2 125622179 125622486 -125065368 - AluJo SINE Alu -5 307 2 195 69 0 0 chr2 125622526 125622555 -125065299 + (TC)n Simple_repeat Simple_repeat 1 29 0 276 100 0 0 chr2 125622555 125622595 -125065259 + (TG)n Simple_repeat Simple_repeat 1 40 0 12732 152 40 9 chr2 125622628 125624966 -125062888 + Tigger1 DNA MER2_type 8 2418 0 300 223 124 25 chr2 125624998 125625119 -125062735 - L1ME4a LINE L1 -171 5950 5818 22 0 0 0 chr2 125625120 125625142 -125062712 + AT_rich Low_complexity Low_complexity 1 22 0 3251 130 28 24 chr2 125625209 125625754 -125062100 - L1PA16 LINE L1 -1 6165 5619 2798 138 94 72 chr2 125626210 125626617 -125061237 - MER39B LTR ERV1 0 653 225 1713 172 3 14 chr2 125626617 125626914 -125060940 - AluSq SINE Alu -11 302 9 2798 138 94 72 chr2 125626914 125627145 -125060709 - MER39B LTR ERV1 -428 225 1 212 98 24 24 chr2 125627577 125627618 -125060236 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 2322 101 3 0 chr2 125627625 125627921 -125059933 - AluSq SINE Alu -16 297 1 461 17 17 0 chr2 125628674 125628732 -125059122 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 296 98 0 0 chr2 125628745 125628786 -125059068 - Alu SINE Alu -20 281 241 2165 110 0 17 chr2 125628935 125629234 -125058620 - AluSx SINE Alu -18 294 1 21 89 0 0 chr2 125630925 125630981 -125056873 + AT_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr2 125631230 125631258 -125056596 + AT_rich Low_complexity Low_complexity 1 28 0 236 348 38 15 chr2 125631381 125631556 -125056298 + MIR SINE MIR 26 202 -60 377 262 41 8 chr2 125632123 125632245 -125055609 - MIR SINE MIR -56 206 81 192 345 0 17 chr2 125632921 125632979 -125054875 + L2 LINE L2 3234 3290 -23 218 313 68 97 chr2 125633492 125633636 -125054218 - L2 LINE L2 0 3272 3125 500 107 13 0 chr2 125633636 125633711 -125054143 - MADE1 DNA Mariner -4 76 1 218 313 68 97 chr2 125633711 125633917 -125053937 - L2 LINE L2 -147 3125 2932 518 207 103 29 chr2 125634156 125634330 -125053524 - MER53 DNA DNA -1 188 2 253 339 64 28 chr2 125635088 125635197 -125052657 + L2 LINE L2 3146 3258 -14 234 304 209 25 chr2 125635795 125635953 -125051901 + MER5A DNA MER1_type 1 187 -2 * 551 208 174 7 chr2 125635825 125635969 -125051885 - MER5A DNA MER1_type -21 168 1 232 374 11 11 chr2 125637071 125637162 -125050692 - MIR SINE MIR -139 123 33 258 307 0 0 chr2 125638198 125638212 -125049642 + GA-rich Low_complexity Low_complexity 2 15 -74 2424 57 10 3 chr2 125638212 125638513 -125049341 + AluY SINE Alu 1 303 -8 258 307 0 0 chr2 125638513 125638586 -125049268 + GA-rich Low_complexity Low_complexity 14 89 0 500 273 63 7 chr2 125638913 125639056 -125048798 - L2 LINE L2 -15 3298 3148 193 256 163 0 chr2 125639709 125639795 -125048059 + MIR SINE MIR 65 164 -98 22 0 0 0 chr2 125641254 125641276 -125046578 + AT_rich Low_complexity Low_complexity 1 22 0 2092 98 57 7 chr2 125641408 125641705 -125046149 + AluSx SINE Alu 1 312 0 215 243 28 125 chr2 125642485 125642629 -125045225 + L2 LINE L2 3009 3138 -175 1003 173 82 119 chr2 125642636 125643098 -125044756 - MLT1C LTR MaLR -13 429 2 441 229 12 78 chr2 125643098 125643264 -125044590 + L2 LINE L2 3151 3305 -8 339 44 0 0 chr2 125644139 125644184 -125043670 + (TA)n Simple_repeat Simple_repeat 1 45 0 233 201 43 58 chr2 125644428 125644567 -125043287 + (TATAA)n Simple_repeat Simple_repeat 1 137 0 470 266 23 46 chr2 125645178 125645351 -125042503 - MER58A DNA MER1_type -55 169 1 233 319 188 12 chr2 125646007 125646167 -125041687 + MIR SINE MIR 3 190 -72 986 301 59 63 chr2 125647082 125647461 -125040393 - L1ME3 LINE L1 -211 5951 5572 2450 63 13 0 chr2 125647461 125647763 -125040091 + AluY SINE Alu 1 306 -5 986 301 59 63 chr2 125647763 125648170 -125039684 - L1ME3 LINE L1 -590 5572 5165 1351 139 9 0 chr2 125648170 125648393 -125039461 - L1PA16 LINE L1 0 6166 5942 986 301 59 63 chr2 125648393 125649172 -125038682 - L1ME3 LINE L1 -997 5165 4389 2354 99 3 0 chr2 125649172 125649476 -125038378 - AluSp SINE Alu -8 305 1 986 301 59 63 chr2 125649476 125650029 -125037825 - L1ME3 LINE L1 -1773 4389 3835 739 169 16 38 chr2 125650268 125650451 -125037403 - L1MB1 LINE L1 -10 6179 6001 2244 162 3 3 chr2 125652307 125652671 -125035183 - THE1B LTR MaLR 0 364 1 10058 120 15 30 chr2 125652671 125654276 -125033578 - THE1B-int LTR MaLR 0 1580 1 2070 136 61 6 chr2 125654276 125654621 -125033233 - THE1B LTR MaLR 0 364 1 2116 153 18 32 chr2 125654858 125655166 -125032688 + THE1C LTR MaLR 1 305 -70 2049 119 51 0 chr2 125655166 125655461 -125032393 - AluSg SINE Alu 0 310 1 2116 153 18 32 chr2 125655461 125655532 -125032322 + THE1C LTR MaLR 305 375 0 321 250 70 25 chr2 125655920 125656052 -125031802 + MIR SINE MIR 50 185 -75 200 233 0 0 chr2 125656409 125656452 -125031402 + MER5A DNA MER1_type 16 58 -131 203 349 62 51 chr2 125658634 125658829 -125029025 - MIR SINE MIR -5 257 61 24 0 0 0 chr2 125660610 125660634 -125027220 + AT_rich Low_complexity Low_complexity 1 24 0 575 260 105 17 chr2 125661066 125661247 -125026607 - MIR SINE MIR -30 232 36 264 30 0 0 chr2 125661271 125661304 -125026550 + (CA)n Simple_repeat Simple_repeat 2 34 0 2470 71 0 0 chr2 125662589 125662897 -125024957 - AluY SINE Alu -3 308 1 22 35 0 0 chr2 125665072 125665101 -125022753 + AT_rich Low_complexity Low_complexity 1 29 0 210 273 0 0 chr2 125665349 125665404 -125022450 + T-rich Low_complexity Low_complexity 1 55 0 186 167 0 0 chr2 125665462 125665498 -125022356 + A-rich Low_complexity Low_complexity 4 39 0 436 345 12 29 chr2 125665689 125665860 -125021994 + MIR3 SINE MIR 38 205 -3 5428 30 0 5 chr2 125666141 125666782 -125021072 - L1PA4 LINE L1 0 6155 5518 956 70 78 0 chr2 125667911 125668040 -125019814 + MER85 DNA T2_type 1 139 0 188 389 66 6 chr2 125668606 125668773 -125019081 + L2 LINE L2 3096 3272 0 24 77 0 0 chr2 125669464 125669516 -125018338 + AT_rich Low_complexity Low_complexity 1 52 0 273 250 0 0 chr2 125670172 125670228 -125017626 - L2 LINE L2 -3 3269 3214 935 225 87 22 chr2 125670305 125670647 -125017207 - MSTD LTR MaLR 0 396 1 288 287 122 61 chr2 125670702 125670883 -125016971 + L3 LINE CR1 572 763 -814 548 341 35 4 chr2 125671153 125671379 -125016475 + MIR SINE MIR 28 260 -2 29 90 0 0 chr2 125671884 125671962 -125015892 + AT_rich Low_complexity Low_complexity 1 78 0 243 298 43 29 chr2 125672391 125672599 -125015255 - L1M4 LINE L1 -2272 3874 3664 304 328 135 26 chr2 125672777 125672969 -125014885 - MIR SINE MIR -27 235 23 353 272 27 5 chr2 125673012 125673148 -125014706 + MIR SINE MIR 6 143 -65 455 261 37 96 chr2 125673765 125673953 -125013901 - MER5B DNA MER1_type 0 178 2 255 319 65 14 chr2 125673980 125674118 -125013736 - L2 LINE L2 -6 3307 3163 185 169 28 28 chr2 125674218 125674289 -125013565 + (TA)n Simple_repeat Simple_repeat 1 71 0 290 292 0 22 chr2 125674332 125674469 -125013385 + (TA)n Simple_repeat Simple_repeat 2 135 0 309 297 32 39 chr2 125674548 125674703 -125013151 + L1MC4a LINE L1 6529 6682 -1126 290 275 130 7 chr2 125674928 125675066 -125012788 - MIR SINE MIR 0 262 108 4941 166 31 7 chr2 125675238 125676406 -125011448 - L1MA9 LINE L1 -13 6299 5103 2330 149 11 47 chr2 125676406 125676850 -125011004 - MSTC LTR MaLR 0 428 1 4941 166 31 7 chr2 125676850 125676867 -125010987 - L1MA9 LINE L1 -1209 5103 5088 597 165 4 145 chr2 125677296 125677386 -125010468 - LTR37B LTR ERV1 0 468 367 375 23 0 0 chr2 125677386 125677430 -125010424 + (TG)n Simple_repeat Simple_repeat 2 45 0 597 165 4 145 chr2 125677430 125677587 -125010267 - LTR37B LTR ERV1 -101 367 256 394 88 0 0 chr2 125677590 125677647 -125010207 - MLT2B3 LTR ERVL 0 520 464 318 167 0 0 chr2 125677647 125677707 -125010147 + (CA)n Simple_repeat Simple_repeat 1 60 0 2556 211 22 4 chr2 125677720 125678212 -125009642 - MLT2B3 LTR ERVL -53 501 1 656 274 39 28 chr2 125678212 125678466 -125009388 - LTR37B LTR ERV1 -211 257 1 24 0 0 0 chr2 125680260 125680284 -125007570 + AT_rich Low_complexity Low_complexity 1 24 0 2213 125 0 0 chr2 125680284 125680579 -125007275 - AluSx SINE Alu -17 295 1 281 234 16 0 chr2 125680795 125680859 -125006995 + MER5A DNA MER1_type 42 106 -83 423 246 49 16 chr2 125681083 125681205 -125006649 - MIR SINE MIR -103 159 34 732 241 46 17 chr2 125683018 125683192 -125004662 + MER5A DNA MER1_type 10 188 -1 258 226 0 0 chr2 125683258 125683320 -125004534 - MLT1L LTR MaLR -393 222 161 378 149 35 0 chr2 125683379 125683466 -125004388 + CT-rich Low_complexity Low_complexity 1 90 0 27 0 0 0 chr2 125683531 125683558 -125004296 + AT_rich Low_complexity Low_complexity 1 27 0 539 208 152 11 chr2 125684070 125684248 -125003606 + MER3 DNA MER1_type 1 203 -6 750 307 73 17 chr2 125684711 125685121 -125002733 - LTR16A1 LTR ERVL -17 440 8 395 246 114 26 chr2 125685197 125685460 -125002394 + LTR16C LTR ERVL 177 491 0 387 0 0 0 chr2 125685686 125685729 -125002125 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 2056 116 0 0 chr2 125685731 125685999 -125001855 - AluSx SINE Alu -32 280 13 2111 116 7 7 chr2 125686590 125686908 -125000946 + AluSq SINE Alu 1 318 0 207 313 24 12 chr2 125687237 125687320 -125000534 + MIR SINE MIR 20 103 -159 188 297 40 14 chr2 125687376 125687450 -125000404 - MIR3 SINE MIR -131 77 2 213 233 0 17 chr2 125688226 125688286 -124999568 + T-rich Low_complexity Low_complexity 2 60 0 232 304 43 33 chr2 125689087 125689179 -124998675 + MIR SINE MIR 86 178 -84 378 273 168 69 chr2 125689228 125689591 -124998263 - MLT1J2 LTR MaLR -50 400 2 225 320 29 74 chr2 125690385 125690560 -124997294 + L2 LINE L2 2912 3078 -194 191 325 145 0 chr2 125690689 125690772 -124997082 + L2 LINE L2 3162 3256 -16 194 186 139 0 chr2 125691656 125691699 -124996155 + MIR SINE MIR 93 141 -67 1278 159 4 4 chr2 125692631 125692863 -124994991 + L1PA15 LINE L1 5934 6165 0 196 327 99 10 chr2 125693276 125693377 -124994477 + L2 LINE L2 3138 3247 -25 24 0 0 0 chr2 125694055 125694079 -124993775 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 125694402 125694425 -124993429 + AT_rich Low_complexity Low_complexity 1 23 0 591 246 0 0 chr2 125694596 125694775 -124993079 + (TA)n Simple_repeat Simple_repeat 2 180 0 1470 172 34 52 chr2 125694775 125695066 -124992788 - AluJo SINE Alu -26 286 1 283 274 0 0 chr2 125696296 125696358 -124991496 - L2 LINE L2 -10 3303 3242 5089 73 32 5 chr2 125698099 125698839 -124989015 + MER4E LTR ERV1 7 766 0 297 0 0 0 chr2 125698995 125699028 -124988826 + (TG)n Simple_repeat Simple_repeat 2 34 0 185 333 65 0 chr2 125699086 125699179 -124988675 + MIR SINE MIR 84 182 -80 624 292 28 0 chr2 125699186 125699364 -124988490 - MER5A DNA MER1_type -6 183 1 306 231 28 9 chr2 125701998 125702106 -124985748 + (TA)n Simple_repeat Simple_repeat 1 110 0 1047 208 0 0 chr2 125702106 125702303 -124985551 - MER6B DNA MER2_type 0 210 14 266 250 0 12 chr2 125702312 125702392 -124985462 + (TA)n Simple_repeat Simple_repeat 1 79 0 443 325 101 5 chr2 125702989 125703198 -124984656 + MIR SINE MIR 16 244 -18 745 200 0 23 chr2 125704136 125704266 -124983588 + FLAM_A SINE Alu 1 127 -6 2087 110 0 7 chr2 125704272 125704616 -124983238 + AluSc SINE Alu 1 342 0 218 339 43 26 chr2 125704738 125704853 -124983001 + MIR3 SINE MIR 6 122 -86 225 200 25 100 chr2 125704857 125704937 -124982917 + L2 LINE L2 3240 3313 0 268 292 0 0 chr2 125705159 125705248 -124982606 - MER94 DNA DNA -40 94 6 811 281 96 32 chr2 125705845 125706283 -124981571 + MLT1C LTR MaLR 1 466 -1 6639 41 8 0 chr2 125707893 125708742 -124979112 - L1PA4 LINE L1 0 6155 5300 * 7192 47 1 1 chr2 125708741 125709691 -124978163 + L1PA4 LINE L1 4336 5285 -861 23 0 0 0 chr2 125710018 125710041 -124977813 + AT_rich Low_complexity Low_complexity 1 23 0 1324 199 45 49 chr2 125711000 125711287 -124976567 + AluJb SINE Alu 10 295 -17 7298 41 6 5 chr2 125711681 125713080 -124974774 - L1PA5 LINE L1 0 6154 4752 564 42 0 0 chr2 125713392 125713463 -124974391 + (CA)n Simple_repeat Simple_repeat 1 71 0 208 282 0 13 chr2 125713867 125713945 -124973909 + (TG)n Simple_repeat Simple_repeat 2 78 0 359 302 35 17 chr2 125715045 125715161 -124972693 + MIR SINE MIR 60 177 -85 506 264 14 0 chr2 125717514 125717662 -124970192 - MER115 DNA AcHobo -22 671 522 288 340 64 6 chr2 125717767 125717923 -124969931 - MER115 DNA AcHobo -371 322 158 21 0 0 0 chr2 125719019 125719040 -124968814 + AT_rich Low_complexity Low_complexity 1 21 0 2142 98 25 0 chr2 125719064 125719350 -124968504 + AluSx SINE Alu 1 293 -19 214 189 0 0 chr2 125719712 125719749 -124968105 + (TG)n Simple_repeat Simple_repeat 2 38 0 596 14 14 0 chr2 125720689 125720762 -124967092 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 2078 129 0 7 chr2 125720762 125721045 -124966809 - AluSx SINE Alu -29 283 1 317 308 108 15 chr2 125721649 125721779 -124966075 + MIR SINE MIR 49 190 -72 22 56 0 0 chr2 125721825 125721861 -124965993 + AT_rich Low_complexity Low_complexity 1 36 0 291 338 0 4 chr2 125722057 125722204 -124965650 + MIR SINE MIR 60 255 -7 613 249 48 29 chr2 125723001 125723274 -124964580 - MER33 DNA MER1_type -14 310 33 2212 135 28 25 chr2 125723925 125724288 -124963566 - THE1B LTR MaLR 0 364 1 296 371 17 17 chr2 125725733 125725908 -124961946 + L3 LINE CR1 1043 1217 -360 227 338 0 13 chr2 125726018 125726095 -124961759 + L3 LINE CR1 1496 1571 -6 183 288 12 88 chr2 125726829 125726909 -124960945 - MIR SINE MIR -180 82 9 246 288 72 9 chr2 125728103 125728214 -124959640 - MER94 DNA DNA 0 134 17 327 25 0 0 chr2 125728254 125728294 -124959560 + (TG)n Simple_repeat Simple_repeat 2 41 0 255 264 84 45 chr2 125728477 125728632 -124959222 - MIR SINE MIR 0 262 102 231 114 0 0 chr2 125729178 125729213 -124958641 + (TA)n Simple_repeat Simple_repeat 2 36 0 1974 129 45 7 chr2 125729213 125729499 -124958355 - AluSq SINE Alu -16 297 1 22 0 0 0 chr2 125730070 125730092 -124957762 + AT_rich Low_complexity Low_complexity 1 22 0 252 356 13 34 chr2 125731176 125731325 -124956529 + MIR SINE MIR 8 153 -109 219 319 29 29 chr2 125731584 125731722 -124956132 + L2 LINE L2 3158 3295 -18 310 288 90 27 chr2 125731765 125731876 -124955978 - MIR SINE MIR -116 146 29 221 259 191 53 chr2 125731895 125732026 -124955828 - MIR SINE MIR -94 168 20 1368 225 67 23 chr2 125732677 125733023 -124954831 - MLT1A1 LTR MaLR -4 361 1 498 96 45 0 chr2 125733027 125733125 -124954729 - L1PA10 LINE L1 -154 5997 5887 251 352 37 28 chr2 125733134 125733242 -124954612 - L2 LINE L2 -37 3276 3168 1319 116 30 0 chr2 125733458 125733656 -124954198 + L1PA10 LINE L1 5961 6164 -4 803 147 0 0 chr2 125733961 125734077 -124953777 - FRAM SINE Alu -26 150 35 1545 208 3 10 chr2 125734547 125734888 -124952966 + AluJo SINE Alu 1 312 0 22 35 0 0 chr2 125735008 125735037 -124952817 + AT_rich Low_complexity Low_complexity 1 29 0 320 274 109 65 chr2 125735046 125735276 -124952578 - MIR SINE MIR -3 259 20 482 287 134 0 chr2 125735398 125735555 -124952299 - MER5B DNA MER1_type 0 178 1 358 264 23 0 chr2 125735619 125735706 -124952148 - MER5A DNA MER1_type -83 106 18 366 248 168 0 chr2 125736179 125736292 -124951562 - MIR SINE MIR -17 245 114 1602 198 0 17 chr2 125736958 125737256 -124950598 - AluJb SINE Alu -19 293 1 181 369 31 0 chr2 125737389 125737454 -124950400 - L2 LINE L2 -2 3311 3245 229 348 0 36 chr2 125737926 125738038 -124949816 + L3 LINE CR1 1468 1575 -2 382 292 151 23 chr2 125738611 125738830 -124949024 - MIR SINE MIR -4 258 12 190 294 0 0 chr2 125739656 125739707 -124948147 + MIR SINE MIR 96 146 -116 305 293 43 0 chr2 125739885 125739901 -124947953 + MIR SINE MIR 117 131 -131 366 23 0 0 chr2 125739901 125739944 -124947910 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 305 293 43 0 chr2 125739944 125740043 -124947811 + MIR SINE MIR 131 237 -25 647 239 115 30 chr2 125740603 125740908 -124946946 - HsTC2 DNA Tc2 -11 1887 1557 305 137 82 0 chr2 125740923 125740996 -124946858 - HsTC2 DNA Tc2 -1605 293 215 1654 239 65 10 chr2 125741303 125741898 -124945956 - MER114 LTR ERV -19 629 2 23 54 0 0 chr2 125742049 125742086 -124945768 + AT_rich Low_complexity Low_complexity 1 37 0 37 0 0 0 chr2 125742155 125742192 -124945662 + AT_rich Low_complexity Low_complexity 1 37 0 231 297 116 0 chr2 125742227 125742365 -124945489 - L1ME LINE L1 -348 5773 5620 28 61 0 0 chr2 125742600 125742649 -124945205 + AT_rich Low_complexity Low_complexity 1 49 0 202 333 11 44 chr2 125743215 125743305 -124944549 - L2 LINE L2 -4 3268 3182 480 319 85 50 chr2 125743440 125743751 -124944103 - L2 LINE L2 -260 3053 2719 23 0 0 0 chr2 125743838 125743861 -124943993 + AT_rich Low_complexity Low_complexity 1 23 0 1611 127 8 12 chr2 125743890 125744142 -124943712 + AluSg SINE Alu 40 290 -20 240 35 0 0 chr2 125744155 125744184 -124943670 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 201 74 0 0 chr2 125744222 125744249 -124943605 + (T)n Simple_repeat Simple_repeat 1 27 0 420 158 69 0 chr2 125744561 125744662 -124943192 + MER41-int LTR ERV1 2761 2868 -3078 1244 120 67 0 chr2 125744662 125744870 -124942984 - MER41B LTR ERV1 -101 534 313 230 224 0 106 chr2 125745195 125745280 -124942574 - MLT1J2 LTR MaLR -7 443 368 1927 99 0 0 chr2 125746832 125747119 -124940735 - AluSg SINE Alu 0 326 40 3517 67 4 24 chr2 125747167 125747291 -124940563 - L1PA13 LINE L1 -1 6162 6037 4767 85 10 16 chr2 125747291 125747962 -124939892 - PABL_B LTR ERV1 0 667 1 1993 169 3 23 chr2 125747963 125748313 -124939541 - MER61A LTR ERV1 0 343 1 3517 67 4 24 chr2 125748313 125748678 -124939176 - L1PA13 LINE L1 -125 6038 5681 2168 77 3 3 chr2 125749453 125749768 -124938086 - AluY SINE Alu 0 311 1 1115 89 0 0 chr2 125749768 125749903 -124937951 - AluSq/x SINE Alu -178 135 1 278 50 25 0 chr2 125750154 125750194 -124937660 + (TTTTG)n Simple_repeat Simple_repeat 4 44 0 25 0 0 0 chr2 125751478 125751503 -124936351 + AT_rich Low_complexity Low_complexity 1 25 0 238 297 0 0 chr2 125751623 125751687 -124936167 + (TCCA)n Simple_repeat Simple_repeat 4 67 0 1380 201 77 4 chr2 125751886 125752160 -124935694 - AluJo SINE Alu -18 294 1 209 286 0 18 chr2 125752242 125752298 -124935556 - MIR3 SINE MIR -2 206 152 2459 84 0 0 chr2 125753422 125753732 -124934122 + AluY SINE Alu 1 310 -1 520 315 46 4 chr2 125753851 125754111 -124933743 - MER46C DNA MER2_type 0 338 68 222 150 0 0 chr2 125754126 125754166 -124933688 + (TAA)n Simple_repeat Simple_repeat 1 40 0 214 353 44 22 chr2 125754215 125754351 -124933503 - MIR3 SINE MIR -66 142 4 201 235 20 0 chr2 125754652 125754703 -124933151 + (CA)n Simple_repeat Simple_repeat 2 53 0 832 191 91 48 chr2 125756528 125756738 -124931116 - MER20 DNA MER1_type 0 219 1 352 261 169 2 chr2 125757066 125757316 -124930538 - L1MC/D LINE L1 -590 5576 5385 226 156 22 0 chr2 125757665 125757710 -124930144 + (TG)n Simple_repeat Simple_repeat 1 46 0 2267 101 23 7 chr2 125758064 125758372 -124929482 + AluSp SINE Alu 1 313 0 21 0 0 0 chr2 125758672 125758693 -124929161 + AT_rich Low_complexity Low_complexity 1 21 0 2223 108 0 0 chr2 125758766 125759103 -124928751 + AluSx SINE Alu 1 337 0 206 277 0 0 chr2 125759779 125759826 -124928028 - L2 LINE L2 -9 3263 3217 474 188 0 0 chr2 125759888 125759973 -124927881 - MLT1A1 LTR MaLR -37 328 244 222 136 0 0 chr2 125760753 125760797 -124927057 + (TG)n Simple_repeat Simple_repeat 1 44 0 245 352 14 0 chr2 125760980 125761051 -124926803 - L2 LINE L2 -25 3247 3176 1739 220 31 3 chr2 125761917 125762272 -124925582 + MLT1A1 LTR MaLR 1 365 0 359 328 23 47 chr2 125762461 125762632 -124925222 + MIR3 SINE MIR 13 179 -29 326 279 132 37 chr2 125763404 125763540 -124924314 + MIR SINE MIR 3 151 -111 744 171 0 0 chr2 125763540 125763663 -124924191 + AluJb SINE Alu 1 123 -189 195 152 0 0 chr2 125763663 125763709 -124924145 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 747 197 10 86 chr2 125763710 125763870 -124923984 + AluJb SINE Alu 125 269 -43 2535 72 0 0 chr2 125763870 125764176 -124923678 - AluY SINE Alu -4 307 2 747 197 10 86 chr2 125764176 125764213 -124923641 + AluJb SINE Alu 269 307 -5 3597 116 15 19 chr2 125764246 125764839 -124923015 + MER4B LTR ERV1 11 601 -9 231 286 0 36 chr2 125764842 125764926 -124922928 + MIR SINE MIR 164 244 -18 2385 192 107 47 chr2 125765728 125766467 -124921387 - LTR48 LTR ERV1 -4 783 1 763 231 21 42 chr2 125766572 125766916 -124920938 - LTR48-int LTR ERV1 -159 5939 4572 4546 204 47 85 chr2 125766929 125767270 -124920584 - LTR48-int LTR ERV1 -1020 5311 4959 2179 135 32 19 chr2 125767270 125767640 -124920214 + THE1C LTR MaLR 1 375 0 4546 204 47 85 chr2 125767640 125768963 -124918891 - LTR48-int LTR ERV1 -1372 4959 3710 442 231 27 57 chr2 125768968 125769287 -124918567 - LTR48-int LTR ERV1 -1962 2918 1719 512 233 72 10 chr2 125769376 125769569 -124918285 - LTR48-int LTR ERV1 -3021 1915 1711 1012 192 17 57 chr2 125769736 125770018 -124917836 - LTR48-int LTR ERV1 -222 3102 1278 814 233 0 6 chr2 125770018 125770190 -124917664 + AluJb SINE Alu 136 306 -6 977 169 0 94 chr2 125770215 125770469 -124917385 - LTR48-int LTR ERV1 -3446 2885 2656 761 251 20 29 chr2 125770503 125770742 -124917112 - LTR48-int LTR ERV1 -3675 2656 754 * 1204 287 11 40 chr2 125770741 125771114 -124916740 - LTR48-int LTR ERV1 -4068 2263 1902 835 224 77 121 chr2 125771158 125771492 -124916362 - LTR48-int LTR ERV1 -4329 1891 294 4155 231 35 49 chr2 125771565 125772720 -124915134 - LTR48-int LTR ERV1 -5179 1152 14 189 0 0 0 chr2 125772746 125772767 -124915087 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1006 253 47 58 chr2 125772767 125773147 -124914707 - LTR48 LTR ERV1 -23 764 389 708 201 85 26 chr2 125773159 125773271 -124914583 + LTR49-int LTR ERV1 448 577 -5754 10662 36 8 1 chr2 125773271 125775339 -124912515 - L1PA4 LINE L1 0 6155 4078 708 201 85 26 chr2 125775339 125775415 -124912439 + LTR49-int LTR ERV1 577 647 -5684 1426 196 116 12 chr2 125775415 125775752 -124912102 - LTR48 LTR ERV1 -415 372 1 379 159 93 65 chr2 125776392 125776499 -124911355 - LTR48 LTR ERV1 0 787 678 2138 203 69 75 chr2 125776505 125777203 -124910651 - LTR8A LTR ERV1 0 727 34 1159 206 71 46 chr2 125777194 125777544 -124910310 - LTR48 LTR ERV1 -90 697 339 * 512 231 0 8 chr2 125777546 125777667 -124910187 + AluJo SINE Alu 14 133 -179 235 297 0 11 chr2 125777672 125777763 -124910091 + L1MC4 LINE L1 6614 6703 -1339 330 153 0 0 chr2 125777764 125777823 -124910031 + (TA)n Simple_repeat Simple_repeat 2 60 0 821 203 0 13 chr2 125777823 125777976 -124909878 + AluJo SINE Alu 133 283 -29 969 200 86 24 chr2 125778055 125778310 -124909544 - LTR48 LTR ERV1 -516 271 1 6432 194 97 87 chr2 125778403 125780641 -124907213 - LTR48-int LTR ERV1 -158 6173 3914 2022 221 32 5 chr2 125780642 125781085 -124906769 - MSTB2 LTR MaLR -2 455 1 1987 208 13 46 chr2 125781091 125781385 -124906469 - MSTB2-int LTR MaLR -5 1646 1371 1496 203 48 0 chr2 125781385 125781675 -124906179 + AluJo SINE Alu 1 304 -8 1987 208 13 46 chr2 125781675 125781836 -124906018 - MSTB2-int LTR MaLR -280 1371 1206 393 243 167 21 chr2 125781839 125781983 -124905871 - LTR48 LTR ERV1 -619 168 4 1919 114 3 59 chr2 125783688 125783995 -124903859 + AluSx SINE Alu 3 292 -20 541 107 12 0 chr2 125784007 125784091 -124903763 + MLT1D LTR MaLR 419 503 -2 1990 58 0 23 chr2 125784726 125784987 -124902867 - AluY SINE Alu -16 295 41 911 218 22 9 chr2 125785030 125785390 -124902464 - L1M4 LINE L1 -1686 4460 3982 22 0 0 0 chr2 125785449 125785471 -124902383 + AT_rich Low_complexity Low_complexity 1 22 0 231 312 18 0 chr2 125785723 125785832 -124902022 + (TATATG)n Simple_repeat Simple_repeat 2 112 0 1775 178 51 6 chr2 125785993 125786325 -124901529 - MER7A DNA MER2_type -1 345 1 585 289 75 69 chr2 125786490 125786771 -124901083 + MARNA DNA Mariner 31 318 -268 2234 108 3 3 chr2 125786771 125787078 -124900776 - AluSc SINE Alu -2 307 1 585 289 75 69 chr2 125787078 125787273 -124900581 + MARNA DNA Mariner 318 510 -76 207 293 40 13 chr2 125788852 125788927 -124898927 - L2 LINE L2 -179 3093 3017 216 274 22 53 chr2 125789363 125789485 -124898369 + MIR SINE MIR 8 122 -86 207 0 0 0 chr2 125790183 125790206 -124897648 + (A)n Simple_repeat Simple_repeat 1 23 0 1363 277 52 7 chr2 125791237 125791663 -124896191 - MER110 LTR ERV1 0 491 47 22 35 0 0 chr2 125791699 125791728 -124896126 + AT_rich Low_complexity Low_complexity 1 29 0 24 67 0 0 chr2 125791947 125791992 -124895862 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr2 125793046 125793082 -124894772 + AT_rich Low_complexity Low_complexity 1 36 0 42117 39 22 2 chr2 125793203 125799230 -124888624 - L1PA2 LINE L1 0 6155 3 234 261 125 45 chr2 125799820 125799996 -124887858 - L2 LINE L2 -2 3311 3122 1026 284 136 55 chr2 125800195 125800484 -124887370 + L2 LINE L2 2201 2465 -848 1589 154 3 11 chr2 125800484 125800770 -124887084 + L1MA10 LINE L1 6038 6321 -13 1026 284 136 55 chr2 125800770 125801527 -124886327 + L2 LINE L2 2465 3313 0 224 292 9 97 chr2 125801750 125801863 -124885991 + L2 LINE L2 3169 3271 -1 1069 234 0 21 chr2 125801996 125802235 -124885619 + AluJb SINE Alu 73 306 -6 250 252 38 92 chr2 125802265 125802396 -124885458 - MER103 DNA DNA -22 144 21 350 386 59 13 chr2 125802958 125803194 -124884660 + MIR SINE MIR 1 247 -15 723 248 75 58 chr2 125803592 125803886 -124883968 - LTR16A LTR ERVL -134 316 18 242 259 74 80 chr2 125804086 125804127 -124883727 + MIR3 SINE MIR 16 56 -152 2337 93 88 0 chr2 125804127 125804470 -124883384 - THE1C LTR MaLR -2 373 1 242 259 74 80 chr2 125804470 125804590 -124883264 + MIR3 SINE MIR 56 176 -32 803 287 125 16 chr2 125805165 125805597 -124882257 + L1MC4a LINE L1 5420 5898 -1910 21 36 0 0 chr2 125805878 125805906 -124881948 + AT_rich Low_complexity Low_complexity 1 28 0 446 278 5 119 chr2 125806266 125806460 -124881394 + MER5B DNA MER1_type 3 174 -4 195 283 109 33 chr2 125806734 125806826 -124881028 + MIR3 SINE MIR 11 109 -99 913 257 49 70 chr2 125807644 125808145 -124879709 - MER39 LTR ERV1 -2 705 53 377 247 60 60 chr2 125808546 125808696 -124879158 + MER103 DNA DNA 1 150 -16 2145 201 22 71 chr2 125808975 125809556 -124878298 + MLT2B3 LTR ERVL 1 553 -1 314 364 46 13 chr2 125809641 125809880 -124877974 + MLT1L LTR MaLR 369 615 0 309 284 110 25 chr2 125810824 125811106 -124876748 + L1ME4a LINE L1 5662 5967 -154 3452 249 62 18 chr2 125811772 125812873 -124874981 + L1MC4a LINE L1 6659 7807 -1 271 334 153 23 chr2 125812911 125813297 -124874557 + L3 LINE CR1 468 903 -674 271 326 93 16 chr2 125813330 125813459 -124874395 + L3 LINE CR1 1237 1375 -202 1985 120 0 4 chr2 125814509 125814784 -124873070 + AluSq SINE Alu 37 310 -3 366 321 40 63 chr2 125815558 125815857 -124871997 - L1MC4a LINE L1 -1937 5871 5580 3304 155 54 41 chr2 125816082 125816745 -124871109 - L1MC1 LINE L1 -14 6319 5648 186 270 126 45 chr2 125817330 125817441 -124870413 - MIR SINE MIR -65 143 24 716 337 88 35 chr2 125817811 125818615 -124869239 - L2 LINE L2 -7 3306 2454 430 305 58 27 chr2 125818942 125819165 -124868689 - L2 LINE L2 -1060 2254 2025 549 273 84 82 chr2 125819165 125819652 -124868202 - L2 LINE L2 -1550 1764 1277 180 337 61 20 chr2 125820446 125820544 -124867310 - MIR SINE MIR -56 206 105 27 49 0 0 chr2 125821283 125821324 -124866530 + AT_rich Low_complexity Low_complexity 1 41 0 264 386 8 15 chr2 125821765 125821897 -124865957 - MIR SINE MIR -112 150 20 203 336 35 35 chr2 125822491 125822634 -124865220 - MIR SINE MIR -1 261 119 368 336 22 8 chr2 125822703 125822837 -124865017 + L2 LINE L2 3178 3313 0 377 305 114 60 chr2 125823541 125823971 -124863883 - L3 LINE CR1 -3 1574 1122 1240 238 22 36 chr2 125824001 125824358 -124863496 + MLT1A1 LTR MaLR 1 352 -13 1637 133 89 113 chr2 125824565 125825024 -124862830 - LTR7 LTR ERV1 -2 448 1 1139 160 66 0 chr2 125825886 125826098 -124861756 - AluSg/x SINE Alu -1 311 86 27 0 0 0 chr2 125826860 125826887 -124860967 + AT_rich Low_complexity Low_complexity 1 27 0 1445 198 18 4 chr2 125826887 125827165 -124860689 + AluJo SINE Alu 1 282 -30 315 71 0 0 chr2 125827168 125827210 -124860644 + (TAA)n Simple_repeat Simple_repeat 2 43 0 436 307 42 36 chr2 125828197 125828389 -124859465 + MIR SINE MIR 9 201 -61 23 97 0 0 chr2 125828482 125828554 -124859300 + AT_rich Low_complexity Low_complexity 1 72 0 2341 43 17 10 chr2 125828876 125829176 -124858678 + AluY SINE Alu 1 302 -9 261 211 0 0 chr2 125829887 125829944 -124857910 + A-rich Low_complexity Low_complexity 1 57 0 2230 125 0 0 chr2 125831290 125831601 -124856253 + AluSx SINE Alu 1 311 -1 365 311 84 7 chr2 125831789 125832022 -124855832 - MIR SINE MIR -10 252 3 194 195 257 88 chr2 125832499 125832612 -124855242 + MIR3 SINE MIR 12 143 -65 183 184 0 0 chr2 125832979 125833017 -124854837 + (CA)n Simple_repeat Simple_repeat 2 39 0 365 316 44 0 chr2 125833042 125833178 -124854676 - MIR SINE MIR -116 146 5 198 209 0 0 chr2 125834001 125834044 -124853810 + (CAA)n Simple_repeat Simple_repeat 1 43 0 1478 197 65 39 chr2 125834417 125834773 -124853081 - MLT1A1 LTR MaLR 0 365 1 237 333 13 0 chr2 125834885 125834960 -124852894 - MIR SINE MIR -62 146 71 220 391 86 8 chr2 125835298 125835426 -124852428 - L2 LINE L2 -12 3260 3123 1841 149 54 3 chr2 125835673 125835969 -124851885 - AluSp SINE Alu -2 311 1 191 349 66 9 chr2 125836005 125836111 -124851743 - L2 LINE L2 -643 2671 2560 327 238 20 73 chr2 125837398 125837549 -124850305 - L2 LINE L2 -91 3222 3080 294 29 0 0 chr2 125837861 125837896 -124849958 + (T)n Simple_repeat Simple_repeat 1 35 0 2203 100 20 0 chr2 125838061 125838360 -124849494 - AluSx SINE Alu -7 305 1 2706 118 0 3 chr2 125840912 125841275 -124846579 - THE1B LTR MaLR -1 363 2 231 281 37 0 chr2 125842524 125842606 -124845248 + MIR SINE MIR 177 261 -1 389 254 68 22 chr2 125842714 125842860 -124844994 + MIR SINE MIR 55 203 -59 646 246 108 0 chr2 125842881 125843076 -124844778 - L1ME2 LINE L1 -166 5998 5783 * 1583 259 68 6 chr2 125843073 125843572 -124844282 - L1MEc LINE L1 -3035 3505 2976 409 282 103 21 chr2 125843577 125843753 -124844101 - L1MEc LINE L1 -4425 2296 2136 4048 144 29 9 chr2 125843753 125844411 -124843443 - L1MA4A LINE L1 -6 6297 5627 409 282 103 21 chr2 125844411 125844564 -124843290 - L1MEc LINE L1 -4585 2136 1940 2342 201 55 31 chr2 125844577 125845065 -124842789 - LTR48B LTR ERV1 0 644 145 43364 34 23 2 chr2 125845065 125851102 -124836752 + L1PA2 LINE L1 2 6155 0 891 167 19 13 chr2 125851102 125851258 -124836596 - LTR48B LTR ERV1 -487 157 1 302 252 175 0 chr2 125851259 125851362 -124836492 - L1MEc LINE L1 -4645 1895 1775 300 53 0 0 chr2 125851897 125851935 -124835919 + (TG)n Simple_repeat Simple_repeat 1 38 0 778 168 14 0 chr2 125852921 125853064 -124834790 + L1MB3 LINE L1 6039 6183 0 1966 173 81 11 chr2 125853114 125853496 -124834358 - LTR48B LTR ERV1 -234 410 2 240 235 0 0 chr2 125853496 125853547 -124834307 - L1MEc LINE L1 -4783 1938 1888 2172 118 7 7 chr2 125854127 125854432 -124833422 - AluSg SINE Alu -5 305 1 278 342 19 26 chr2 125855592 125855747 -124832107 + MER5A DNA MER1_type 4 157 -32 2829 16 0 0 chr2 125856047 125856358 -124831496 + AluYb8 SINE Alu 1 311 -7 573 55 0 0 chr2 125857091 125857164 -124830690 + (TTTC)n Simple_repeat Simple_repeat 4 76 0 1561 233 50 16 chr2 125859185 125859562 -124828292 + MLT1B LTR MaLR 1 390 0 228 67 0 0 chr2 125859581 125859611 -124828243 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1889 209 8 32 chr2 125859657 125860059 -124827795 - MSTD LTR MaLR -1 395 4 209 164 0 36 chr2 125861043 125861077 -124826777 + (TAA)n Simple_repeat Simple_repeat 2 35 -19 1533 212 7 0 chr2 125861077 125861370 -124826484 + AluJo SINE Alu 1 295 -17 209 164 0 36 chr2 125861370 125861390 -124826464 + (TAA)n Simple_repeat Simple_repeat 35 54 0 218 229 21 0 chr2 125861400 125861448 -124826406 - L2 LINE L2 -40 3232 3184 271 372 62 39 chr2 125861780 125861795 -124826059 - L2 LINE L2 -458 2856 2843 278 67 22 0 chr2 125861795 125861840 -124826014 + (TA)n Simple_repeat Simple_repeat 1 46 0 271 372 62 39 chr2 125861840 125862082 -124825772 - L2 LINE L2 -471 2843 2593 184 237 40 66 chr2 125862187 125862263 -124825591 - L2 LINE L2 0 3313 3240 1464 195 42 39 chr2 125862359 125862666 -124825188 + AluJo SINE Alu 1 308 -4 1572 192 115 28 chr2 125862904 125863268 -124824586 + MSTD LTR MaLR 1 396 0 277 277 66 54 chr2 125863441 125863607 -124824247 - MLT1K LTR MaLR -2 586 419 2365 113 0 0 chr2 125864097 125864408 -124823446 - AluSq SINE Alu -2 311 1 1018 207 160 53 chr2 125864459 125864624 -124823230 - MLT1A2 LTR MaLR 0 374 228 186 43 0 0 chr2 125864624 125864647 -124823207 + (GA)n Simple_repeat Simple_repeat 2 24 0 1018 207 160 53 chr2 125864647 125864819 -124823035 - MLT1A2 LTR MaLR -146 228 1 255 290 0 0 chr2 125865248 125865310 -124822544 + MER5A DNA MER1_type 48 109 -80 22 0 0 0 chr2 125866104 125866126 -124821728 + AT_rich Low_complexity Low_complexity 1 22 0 204 276 138 69 chr2 125866227 125866343 -124821511 + MIR SINE MIR 32 139 -123 1735 177 30 9 chr2 125866343 125866671 -124821183 - MER44D DNA MER2_type -4 605 1 204 276 138 69 chr2 125866671 125866757 -124821097 + MIR SINE MIR 139 248 -14 277 331 32 24 chr2 125867476 125867600 -124820254 - MER5A DNA MER1_type -1 188 64 1194 194 0 5 chr2 125868574 125868780 -124819074 - MLT1B LTR MaLR 0 390 186 269 263 0 25 chr2 125868787 125868867 -124818987 + GA-rich Low_complexity Low_complexity 1 78 0 329 195 157 132 chr2 125868873 125869032 -124818822 - MLT1A1 LTR MaLR -211 163 1 235 361 115 25 chr2 125869124 125869246 -124818608 - L2 LINE L2 -4 3268 3136 1062 109 0 99 chr2 125869717 125869919 -124817935 - AluSp SINE Alu -2 311 130 203 68 91 0 chr2 125869931 125869975 -124817879 + (GTTTG)n Simple_repeat Simple_repeat 2 49 0 253 290 60 10 chr2 125870665 125870765 -124817089 + MLT1L LTR MaLR 94 198 -417 3274 65 16 0 chr2 125870771 125871215 -124816639 + MER11B LTR ERVK 1 451 -785 474 222 0 0 chr2 125871560 125871727 -124816127 + (CA)n Simple_repeat Simple_repeat 2 168 0 236 263 0 0 chr2 125871937 125871994 -124815860 + tRNA-Ala-GCG tRNA tRNA 1 57 -18 201 222 12 25 chr2 125873171 125873252 -124814602 + GA-rich Low_complexity Low_complexity 3 82 0 694 314 114 59 chr2 125875858 125876784 -124811070 + L2 LINE L2 1982 2958 -356 192 40 0 0 chr2 125878099 125878124 -124809730 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2296 115 0 0 chr2 125879504 125879816 -124808038 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 125879822 125879843 -124808011 + AT_rich Low_complexity Low_complexity 1 21 0 563 296 12 0 chr2 125879921 125880083 -124807771 - MER5A DNA MER1_type 0 189 26 747 87 0 0 chr2 125881663 125881767 -124806087 + (TTTC)n Simple_repeat Simple_repeat 2 105 0 1934 127 4 0 chr2 125881769 125882044 -124805810 - AluSg SINE Alu -30 280 5 1200 311 125 40 chr2 125882120 125882261 -124805593 + L2 LINE L2 1729 1857 -1457 1183 222 42 57 chr2 125882261 125882662 -124805192 + MLT2C1 LTR ERVL 3 397 0 1200 311 125 40 chr2 125882662 125883447 -124804407 + L2 LINE L2 1857 2734 -580 267 317 73 105 chr2 125883512 125883856 -124803998 + L2 LINE L2 2974 3306 -7 203 364 102 17 chr2 125883873 125884049 -124803805 - L3 LINE CR1 -1173 404 214 206 306 47 35 chr2 125884100 125884185 -124803669 - L2 LINE L2 0 3313 3228 287 244 63 94 chr2 125884536 125884663 -124803191 + MER5B DNA MER1_type 6 128 -50 482 304 166 14 chr2 125884814 125885031 -124802823 + MIR SINE MIR 8 257 -5 950 33 98 8 chr2 125885283 125885405 -124802449 - AluY SINE Alu -178 133 1 2843 13 0 0 chr2 125885412 125885723 -124802131 - AluY SINE Alu 0 311 1 271 272 206 0 chr2 125886465 125886557 -124801297 - L2 LINE L2 -7 3265 3155 485 270 72 68 chr2 125887393 125887615 -124800239 + MIR SINE MIR 20 242 -20 313 343 125 14 chr2 125887670 125887950 -124799904 - L2 LINE L2 -428 2886 2576 348 302 19 58 chr2 125888143 125888299 -124799555 - MIR SINE MIR -62 146 37 200 163 65 0 chr2 125888692 125888845 -124799009 + (TA)n Simple_repeat Simple_repeat 2 164 0 76 12 0 0 chr2 125888850 125888933 -124798921 + AT_rich Low_complexity Low_complexity 1 83 0 239 309 0 21 chr2 125888984 125889078 -124798776 - MIR SINE MIR -109 153 62 203 341 139 6 chr2 125889479 125889652 -124798202 + L2 LINE L2 2858 3053 -219 392 228 53 9 chr2 125891152 125891266 -124796588 - MER117 DNA MER1_type -77 120 2 187 219 0 0 chr2 125893637 125893678 -124794176 + MIR SINE MIR 112 152 -110 193 323 62 0 chr2 125894289 125894354 -124793500 + L2 LINE L2 3191 3259 -54 289 283 77 10 chr2 125894548 125894682 -124793172 - MIR SINE MIR -61 147 43 21 36 0 0 chr2 125894693 125894721 -124793133 + AT_rich Low_complexity Low_complexity 1 28 0 361 347 67 4 chr2 125895991 125896216 -124791638 - MIR SINE MIR -12 250 12 27 81 0 0 chr2 125896221 125896283 -124791571 + AT_rich Low_complexity Low_complexity 1 62 0 235 258 54 0 chr2 125946543 125946636 -124741218 - L1MC5 LINE L1 -603 7358 7261 351 297 88 8 chr2 125946758 125946997 -124740857 - L1MC5 LINE L1 -733 7228 6971 411 113 0 0 chr2 125947037 125947108 -124740746 + (CATA)n Simple_repeat Simple_repeat 2 72 0 248 319 104 12 chr2 125947126 125947367 -124740487 - L1MC5 LINE L1 -1004 6957 6695 27 29 0 0 chr2 125947614 125947648 -124740206 + AT_rich Low_complexity Low_complexity 1 34 0 1801 180 124 32 chr2 125947774 125948061 -124739793 - L1MB8 LINE L1 -69 6109 5850 2090 127 3 25 chr2 125948061 125948375 -124739479 - AluSq SINE Alu -6 307 1 1801 180 124 32 chr2 125948375 125948610 -124739244 - L1MB8 LINE L1 -328 5850 5539 194 253 93 40 chr2 125948840 125948915 -124738939 - MIR3 SINE MIR -42 166 88 288 245 88 68 chr2 125948955 125949102 -124738752 - MER20 DNA MER1_type -2 217 68 305 244 65 12 chr2 125949104 125949272 -124738582 + (CACCAT)n Simple_repeat Simple_repeat 3 179 0 * 333 235 1 42 chr2 125949147 125950030 -124737824 + (CCA)n Simple_repeat Simple_repeat 1 847 0 1138 106 6 0 chr2 125950133 125950303 -124737551 - L1MA2 LINE L1 0 6304 6134 1988 117 7 0 chr2 125950970 125951251 -124736603 + AluSq SINE Alu 1 283 -30 258 32 0 0 chr2 125951256 125951287 -124736567 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 697 298 58 37 chr2 125951591 125951967 -124735887 + MLT1I LTR MaLR 4 387 -22 272 421 104 6 chr2 125952019 125952202 -124735652 + L2 LINE L2 3072 3272 0 418 377 47 23 chr2 125953001 125953258 -124734596 + L1ME4a LINE L1 5563 5825 -296 210 37 0 0 chr2 125954066 125954093 -124733761 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 320 362 64 7 chr2 125956053 125956194 -124731660 + MIR SINE MIR 20 168 -94 2564 65 0 0 chr2 125956990 125957299 -124730555 + AluY SINE Alu 1 309 -2 367 245 24 66 chr2 125957459 125957582 -124730272 - LTR41 LTR ERVL -591 182 84 3237 130 13 4 chr2 125957582 125958113 -124729741 + L1PB1 LINE L1 5611 6146 -5 367 245 24 66 chr2 125958113 125958194 -124729660 - LTR41 LTR ERVL -689 84 1 445 356 47 13 chr2 125959936 125960172 -124727682 - MIR SINE MIR -16 246 3 1992 188 21 3 chr2 125960840 125961223 -124726631 - MLT1B LTR MaLR 0 390 1 505 291 7 76 chr2 125961321 125961623 -124726231 - MLT1J LTR MaLR -128 383 103 1881 161 0 7 chr2 125961720 125962108 -124725746 + AluSx SINE Alu 17 402 0 710 217 52 64 chr2 125962274 125962601 -124725253 + MER33 DNA MER1_type 2 324 0 583 142 0 18 chr2 125962672 125962785 -124725069 - L1MA9 LINE L1 -22 6290 6180 3247 172 56 64 chr2 125962787 125964947 -124722907 - L1MA9 LINE L1 -231 6081 3812 31 0 0 43 chr2 125964954 125964982 -124722872 + AT_rich Low_complexity Low_complexity 1 29 -15 1938 124 3 7 chr2 125964982 125965291 -124722563 - AluSc SINE Alu 0 308 1 31 0 0 43 chr2 125965291 125965307 -124722547 + AT_rich Low_complexity Low_complexity 29 44 0 2542 133 91 2 chr2 125965459 125965879 -124721975 + MER1A DNA MER1_type 73 529 0 203 79 26 0 chr2 125966451 125966489 -124721365 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1896 161 7 0 chr2 125966491 125966770 -124721084 - AluSx SINE Alu -31 281 1 214 258 67 11 chr2 125968045 125968134 -124719720 + L2 LINE L2 2758 2851 -463 389 209 203 0 chr2 125968171 125968319 -124719535 - MER104 DNA MER2_type 0 180 3 336 320 67 17 chr2 125970910 125971088 -124716766 + MIR SINE MIR 72 258 -4 273 315 107 0 chr2 125971401 125971550 -124716304 - MIR SINE MIR -25 237 73 246 105 0 0 chr2 125972202 125972240 -124715614 + (TG)n Simple_repeat Simple_repeat 2 39 0 187 364 78 8 chr2 125973028 125973157 -124714697 + MIR SINE MIR 54 191 -71 250 357 70 7 chr2 125973466 125973609 -124714245 + MIR SINE MIR 69 220 -42 239 349 62 66 chr2 125973785 125974026 -124713828 - L2 LINE L2 -108 3164 2925 549 192 0 19 chr2 125974154 125974258 -124713596 + MER5B DNA MER1_type 75 176 -2 194 348 29 0 chr2 125975117 125975186 -124712668 - L2 LINE L2 -12 3260 3190 352 274 115 0 chr2 125975523 125975680 -124712174 + MER5B DNA MER1_type 1 175 -3 691 321 28 21 chr2 125976231 125976620 -124711234 + L1ME4a LINE L1 5445 5836 -285 287 294 189 7 chr2 125977111 125977264 -124710590 - MIR SINE MIR -21 241 61 625 235 0 0 chr2 125977445 125977611 -124710243 + L1MA2 LINE L1 6139 6304 0 2674 51 0 0 chr2 125977707 125978018 -124709836 - AluY SINE Alu 0 311 1 25 0 0 0 chr2 125979144 125979169 -124708685 + AT_rich Low_complexity Low_complexity 1 25 0 517 0 44 0 chr2 125979949 125980017 -124707837 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 542 244 0 8 chr2 125980048 125980167 -124707687 - MIR SINE MIR -105 157 40 2408 54 0 10 chr2 125980883 125981179 -124706675 + AluY SINE Alu 1 293 -18 183 393 56 0 chr2 125982194 125982283 -124705571 + L2 LINE L2 3195 3288 -25 503 323 43 16 chr2 125983022 125983208 -124704646 + MIR SINE MIR 42 232 -30 2279 93 3 7 chr2 125983640 125983931 -124703923 - AluSx SINE Alu -2 310 21 1328 106 0 5 chr2 125984397 125984595 -124703259 + L1PA14 LINE L1 5961 6157 -4 272 308 87 19 chr2 125985915 125986019 -124701835 + MIR SINE MIR 78 188 -74 255 203 130 77 chr2 125986333 125986453 -124701401 + MIR SINE MIR 44 171 -37 234 298 35 35 chr2 125987001 125987115 -124700739 + MIR SINE MIR 84 197 -65 258 294 56 16 chr2 125987808 125987934 -124699920 + L2 LINE L2 3182 3312 -1 204 122 0 0 chr2 125988256 125988297 -124699557 + (TA)n Simple_repeat Simple_repeat 1 41 0 522 304 55 18 chr2 125988778 125988998 -124698856 + MIR SINE MIR 32 259 -3 2212 81 0 62 chr2 125990147 125990468 -124697386 + AluSq SINE Alu 1 301 -12 7061 132 26 21 chr2 125990474 125990638 -124697216 + MER57A-int LTR ERV1 5932 6094 -1443 1498 184 12 8 chr2 125990638 125990934 -124696920 + AluJb SINE Alu 28 324 0 7061 132 26 21 chr2 125990934 125991977 -124695877 + MER57A-int LTR ERV1 6094 7146 -391 679 138 24 8 chr2 125991977 125992100 -124695754 + LTR54B LTR ERV1 3 127 -371 1538 143 31 0 chr2 125992100 125992358 -124695496 + MER57A-int LTR ERV1 7272 7537 0 1158 129 62 0 chr2 125992358 125992551 -124695303 + MER57A LTR ERV1 1 205 -198 972 203 74 51 chr2 125994815 125995209 -124692645 - MER69 DNA AcHobo -114 2412 2010 1160 280 56 7 chr2 125995212 125995626 -124692228 - MER69 DNA AcHobo -663 563 130 423 287 0 15 chr2 125995660 125995796 -124692058 + MLT2F LTR ERVL 6 139 -524 1532 236 55 7 chr2 125995825 125996245 -124691609 + MLT2F LTR ERVL 205 644 -19 1284 160 166 35 chr2 125997475 125997849 -124690005 - LTR29 LTR ERV1 -198 424 2 252 310 20 10 chr2 125999055 125999155 -124688699 + MIR SINE MIR 46 146 -62 2249 188 47 13 chr2 125999496 126000027 -124687827 - L1MB7 LINE L1 -12 6172 5624 943 258 84 21 chr2 126000090 126000345 -124687509 - L1MD2 LINE L1 -55 6304 6022 1696 211 47 5 chr2 126000345 126000725 -124687129 + MSTD LTR MaLR 1 396 0 943 258 84 21 chr2 126000725 126000802 -124687052 - L1MD2 LINE L1 -337 6022 5951 237 296 25 25 chr2 126001980 126002061 -124685793 - L2 LINE L2 -189 3083 3003 656 321 47 14 chr2 126002397 126002824 -124685030 - L1MC4a LINE L1 -1841 5967 5527 201 147 0 0 chr2 126002836 126002870 -124684984 + (TG)n Simple_repeat Simple_repeat 2 35 0 396 273 6 19 chr2 126002938 126003099 -124684755 + L1MC/D LINE L1 5331 5489 -2319 22 35 0 0 chr2 126003369 126003398 -124684456 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr2 126003530 126003554 -124684300 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 40927 32 21 2 chr2 126003564 126009593 -124678261 - L1PA2 LINE L1 -5 6150 3 348 316 36 42 chr2 126009600 126009768 -124678086 - L1MC4a LINE L1 -1131 5015 4849 21 0 0 0 chr2 126009770 126009791 -124678063 + AT_rich Low_complexity Low_complexity 1 21 0 473 276 52 65 chr2 126009796 126010086 -124677768 - L1MC4a LINE L1 -2302 3844 3559 439 227 0 36 chr2 126010149 126010259 -124677595 - FRAM SINE Alu -4 172 67 26 0 0 0 chr2 126010614 126010640 -124677214 + AT_rich Low_complexity Low_complexity 1 26 0 517 323 20 24 chr2 126010832 126011086 -124676768 - MLT2F LTR ERVL -410 253 1 453 36 0 0 chr2 126011156 126011211 -124676643 + (GA)n Simple_repeat Simple_repeat 2 56 0 907 286 67 40 chr2 126011223 126011719 -124676135 + HAL1 LINE L1 130 638 -1869 309 256 78 98 chr2 126011726 126012124 -124675730 + HAL1 LINE L1 668 1057 -1450 739 208 34 11 chr2 126012159 126012337 -124675517 + L1MD2 LINE L1 5718 5899 -460 2275 92 13 0 chr2 126012487 126012792 -124675062 + AluSg SINE Alu 1 309 -1 917 145 0 26 chr2 126012906 126013058 -124674796 - FRAM SINE Alu -4 172 25 497 240 33 50 chr2 126013169 126013411 -124674443 + L1MC5 LINE L1 6926 7163 -798 239 197 338 0 chr2 126013934 126014005 -124673849 + MLT1H LTR MaLR 378 472 -77 2052 136 20 3 chr2 126014292 126014623 -124673231 + AluSg SINE Alu 1 336 0 22 94 0 0 chr2 126014623 126014687 -124673167 + AT_rich Low_complexity Low_complexity 1 64 0 886 294 24 11 chr2 126014774 126015236 -124672618 + HAL1 LINE L1 1945 2412 -95 2206 131 8 32 chr2 126015308 126015681 -124672173 - THE1B LTR MaLR 0 364 1 224 269 15 0 chr2 126015757 126015824 -124672030 - MIR SINE MIR -37 225 158 565 274 133 48 chr2 126015875 126016372 -124671482 - MLT1F LTR MaLR -3 539 1 303 297 30 30 chr2 126016372 126016473 -124671381 - MIR SINE MIR -153 109 9 224 369 27 9 chr2 126017231 126017342 -124670512 + L2 LINE L2 3155 3267 -5 2236 110 7 0 chr2 126017422 126017722 -124670132 + AluSg SINE Alu 1 302 -8 229 403 40 40 chr2 126017768 126018041 -124669813 - L2 LINE L2 -1 3271 2999 1329 183 8 46 chr2 126018064 126018327 -124669527 + AluJb SINE Alu 1 253 -59 234 271 192 20 chr2 126019022 126019173 -124668681 + MIR SINE MIR 13 189 -73 2124 99 10 0 chr2 126019436 126019729 -124668125 + AluSc SINE Alu 1 296 -13 217 324 114 9 chr2 126019916 126020021 -124667833 - L2 LINE L2 -17 3255 3140 199 281 292 10 chr2 126020359 126020455 -124667399 + MER5A DNA MER1_type 45 167 -22 * 203 255 298 21 chr2 126020369 126020463 -124667391 - MER5A DNA MER1_type -44 145 26 318 331 35 6 chr2 126020573 126020742 -124667112 - MIR SINE MIR -1 261 88 27 0 0 0 chr2 126021087 126021114 -124666740 + AT_rich Low_complexity Low_complexity 1 27 0 342 0 0 0 chr2 126021458 126021496 -124666358 + (CA)n Simple_repeat Simple_repeat 2 39 0 2122 214 46 22 chr2 126021515 126021555 -124666299 - MLT2B3 LTR ERVL 0 554 516 330 80 0 0 chr2 126021555 126021605 -124666249 + (TG)n Simple_repeat Simple_repeat 1 50 0 2122 214 46 22 chr2 126021605 126022105 -124665749 - MLT2B3 LTR ERVL -38 516 1 235 257 50 0 chr2 126022407 126022508 -124665346 - L1ME4a LINE L1 -17 6104 5999 479 266 120 9 chr2 126022631 126022864 -124664990 - L1ME4a LINE L1 -294 5827 5569 233 354 96 37 chr2 126023275 126023628 -124664226 + L2 LINE L2 2891 3264 -8 703 202 0 16 chr2 126025965 126026094 -124661760 - AluJb SINE Alu -185 127 1 187 340 94 0 chr2 126026409 126026515 -124661339 - MIR3 SINE MIR -33 175 60 1077 202 138 79 chr2 126027276 126027747 -124660107 - MLT2B1 LTR ERVL -1 519 21 1147 212 129 6 chr2 126027854 126028180 -124659674 - MER31B LTR ERV1 -96 370 5 2167 106 7 7 chr2 126032196 126032498 -124655356 - AluSc SINE Alu -7 302 1 215 287 46 23 chr2 126032545 126032632 -124655222 + MIR SINE MIR 76 164 -98 249 309 150 33 chr2 126032656 126032881 -124654973 - MIR SINE MIR -12 250 2 24 53 0 0 chr2 126032939 126032977 -124654877 + AT_rich Low_complexity Low_complexity 1 38 0 236 291 23 0 chr2 126032978 126033064 -124654790 - MER113 DNA MER1_type? -433 88 1 2293 133 11 55 chr2 126033529 126033986 -124653868 - LTR23 LTR ERV1 0 437 1 738 259 85 4 chr2 126034176 126034412 -124653442 - MLT1F1 LTR MaLR 0 567 313 2208 155 57 44 chr2 126034499 126034669 -124653185 - LTR49 LTR ERV1 -65 530 364 1701 193 3 3 chr2 126034669 126034980 -124652874 + AluJb SINE Alu 1 311 -1 2208 155 57 44 chr2 126034980 126035332 -124652522 - LTR49 LTR ERV1 -231 364 1 418 289 33 71 chr2 126035364 126035575 -124652279 - MLT1F1 LTR MaLR -339 203 1 1759 126 4 27 chr2 126037453 126037716 -124650138 + AluSx SINE Alu 42 298 -14 338 258 11 21 chr2 126037718 126037811 -124650043 - L1MC4 LINE L1 -1337 6705 6614 369 0 0 0 chr2 126037841 126037882 -124649972 + (CA)n Simple_repeat Simple_repeat 2 42 0 325 102 34 0 chr2 126037893 126037952 -124649902 + Alu SINE Alu 238 298 -2 450 101 0 0 chr2 126037960 126038029 -124649825 + (TA)n Simple_repeat Simple_repeat 1 69 0 212 167 0 0 chr2 126038867 126038909 -124648945 + T-rich Low_complexity Low_complexity 2 43 0 261 333 88 6 chr2 126038943 126039114 -124648740 + MIR3 SINE MIR 21 205 -3 232 339 129 42 chr2 126039487 126039797 -124648057 + L3 LINE CR1 1134 1470 -107 1695 194 75 3 chr2 126040561 126040921 -124646933 - MLT1B LTR MaLR 0 390 5 184 286 12 48 chr2 126040928 126041012 -124646842 + L2 LINE L2 3148 3228 -85 357 305 88 62 chr2 126042019 126042360 -124645494 - L2 LINE L2 -58 3214 2865 211 326 42 11 chr2 126043015 126043110 -124644744 - L2 LINE L2 -4 3268 3171 186 400 0 0 chr2 126043703 126043778 -124644076 + L2 LINE L2 3193 3267 -5 224 300 44 11 chr2 126045079 126045169 -124642685 - MIR SINE MIR -75 133 41 296 162 0 29 chr2 126045285 126045353 -124642501 + (TGG)n Simple_repeat Simple_repeat 1 66 0 729 208 0 0 chr2 126045368 126045546 -124642308 + (TGG)n Simple_repeat Simple_repeat 1 178 0 790 167 17 6 chr2 126045575 126045749 -124642105 + (ATGGTG)n Simple_repeat Simple_repeat 4 179 0 564 251 66 22 chr2 126045815 126045998 -124641856 - MIR SINE MIR -28 234 44 539 296 101 20 chr2 126046406 126046636 -124641218 + MIR SINE MIR 16 262 0 274 263 192 0 chr2 126047127 126047226 -124640628 + L2 LINE L2 3171 3288 -25 24 32 0 0 chr2 126047332 126047363 -124640491 + AT_rich Low_complexity Low_complexity 1 31 0 549 315 76 17 chr2 126047441 126047679 -124640175 - MIR SINE MIR 0 262 11 191 304 0 0 chr2 126048044 126048090 -124639764 - L2 LINE L2 -41 3231 3186 202 344 0 0 chr2 126048417 126048481 -124639373 + MIR3 SINE MIR 99 162 -46 234 302 45 86 chr2 126048703 126048925 -124638929 + MIR SINE MIR 35 247 -15 408 88 0 0 chr2 126049105 126049162 -124638692 + (CA)n Simple_repeat Simple_repeat 2 58 0 280 273 67 80 chr2 126049519 126049757 -124638097 + MLT1K LTR MaLR 338 572 -16 232 290 130 30 chr2 126049785 126049916 -124637938 - MIR SINE MIR -117 145 2 21 36 0 0 chr2 126050424 126050452 -124637402 + AT_rich Low_complexity Low_complexity 1 28 0 603 225 29 157 chr2 126051216 126051433 -124636421 + MER97b DNA MER1_type? 9 150 -940 2082 134 0 19 chr2 126051433 126051747 -124636107 - AluSq SINE Alu 0 313 6 603 225 29 157 chr2 126051747 126051943 -124635911 + MER97b DNA MER1_type? 150 369 -721 473 296 25 0 chr2 126051963 126052122 -124635732 - MER97b DNA MER1_type? -494 559 397 303 254 56 23 chr2 126052632 126052797 -124635057 + MER97a DNA MER1_type? 801 894 0 184 291 228 24 chr2 126053105 126053232 -124634622 - MIR3 SINE MIR -3 205 53 425 198 52 10 chr2 126054535 126054631 -124633223 - MIR SINE MIR -80 182 83 422 286 85 27 chr2 126054697 126054921 -124632933 + MIR SINE MIR 18 254 -8 199 306 71 24 chr2 126054918 126055003 -124632851 + MIR SINE MIR 34 122 -86 * 231 147 0 0 chr2 126055724 126055758 -124632096 - Charlie8 DNA MER1_type -1007 1410 1377 22 35 0 0 chr2 126055979 126056008 -124631846 + AT_rich Low_complexity Low_complexity 1 29 0 387 356 74 5 chr2 126056414 126056632 -124631222 + MIR SINE MIR 21 249 -13 198 0 0 0 chr2 126057463 126057485 -124630369 + (A)n Simple_repeat Simple_repeat 1 22 0 318 224 78 115 chr2 126057485 126057677 -124630177 + L3 LINE CR1 901 1085 -492 466 82 51 0 chr2 126057996 126058094 -124629760 + (TA)n Simple_repeat Simple_repeat 1 103 0 314 333 57 10 chr2 126058700 126058892 -124628962 + L2 LINE L2 1711 1911 -1403 195 69 0 0 chr2 126058964 126058993 -124628861 + (CA)n Simple_repeat Simple_repeat 2 30 0 204 340 68 64 chr2 126059015 126059562 -124628292 + L2 LINE L2 2284 2832 -482 385 315 55 28 chr2 126059729 126059910 -124627944 - MIR SINE MIR -65 197 12 5111 103 13 5 chr2 126060487 126061234 -124626620 - L1PA11 LINE L1 -2 6172 5420 233 305 114 57 chr2 126061427 126061532 -124626322 - MIR SINE MIR -97 165 55 207 286 0 16 chr2 126061629 126061692 -124626162 - MIR SINE MIR -44 218 157 838 217 12 12 chr2 126062577 126062743 -124625111 + FRAM SINE Alu 1 166 0 24 0 0 0 chr2 126063150 126063174 -124624680 + AT_rich Low_complexity Low_complexity 1 24 0 643 157 0 0 chr2 126063575 126063690 -124624164 - L1MA7 LINE L1 -7 6284 6170 652 231 17 6 chr2 126063690 126063863 -124623991 + L1MA7 LINE L1 5732 5906 -385 597 203 16 16 chr2 126065077 126065205 -124622649 + FLAM_A SINE Alu 3 130 -3 386 313 109 10 chr2 126065389 126065581 -124622273 + MIR SINE MIR 10 220 -42 22 0 0 0 chr2 126066154 126066176 -124621678 + AT_rich Low_complexity Low_complexity 1 22 0 396 120 0 130 chr2 126066384 126066423 -124621431 + MADE1 DNA Mariner 1 23 -57 2416 96 0 0 chr2 126066423 126066725 -124621129 - AluSc SINE Alu -7 302 1 396 120 0 130 chr2 126066725 126066777 -124621077 + MADE1 DNA Mariner 23 80 0 217 317 79 10 chr2 126066798 126066899 -124620955 + L2 LINE L2 3147 3254 -18 1874 141 30 0 chr2 126067716 126068013 -124619841 + AluSg SINE Alu 2 307 -3 427 122 12 12 chr2 126068013 126068095 -124619759 + (GGAA)n Simple_repeat Simple_repeat 1 82 0 249 281 0 34 chr2 126069097 126069186 -124618668 + MIR SINE MIR 30 115 -147 2051 119 0 58 chr2 126069492 126069820 -124618034 + AluSc SINE Alu 1 309 0 319 311 0 30 chr2 126070310 126070445 -124617409 + CT-rich Low_complexity Low_complexity 4 134 0 22 56 0 0 chr2 126070628 126070664 -124617190 + AT_rich Low_complexity Low_complexity 1 36 0 464 271 52 103 chr2 126072792 126072992 -124614862 - L2 LINE L2 -4 3309 3137 1982 151 39 20 chr2 126072992 126073349 -124614505 - THE1B LTR MaLR 0 364 1 464 271 52 103 chr2 126073349 126073535 -124614319 - L2 LINE L2 -176 3137 2943 318 359 74 30 chr2 126073839 126074137 -124613717 - LTR67 LTR ERVL -218 339 29 279 54 0 0 chr2 126074760 126074776 -124613078 + (TG)n Simple_repeat Simple_repeat 1 53 0 279 54 0 0 chr2 126074776 126074813 -124613041 + (TG)n Simple_repeat Simple_repeat 2 38 0 367 277 56 59 chr2 126076406 126076726 -124611128 + MLT1H LTR MaLR 76 384 -25 237 280 40 0 chr2 126077237 126077362 -124610492 + (TA)n Simple_repeat Simple_repeat 1 130 0 2157 120 7 0 chr2 126078668 126078977 -124608877 - AluSx SINE Alu 0 312 2 286 226 40 27 chr2 126079214 126079315 -124608539 + MLT1I LTR MaLR 321 409 0 611 265 41 20 chr2 126079449 126079645 -124608209 - MIR SINE MIR 0 262 63 * 639 310 139 25 chr2 126079641 126080122 -124607732 + L2 LINE L2 2577 3144 -169 2184 128 0 0 chr2 126080122 126080418 -124607436 - AluSg SINE Alu -14 296 1 639 310 139 25 chr2 126080418 126080610 -124607244 + L2 LINE L2 3144 3313 0 2040 118 4 0 chr2 126081167 126081479 -124606375 - AluSx SINE Alu 0 314 2 341 312 106 12 chr2 126081584 126081754 -124606100 - MIR SINE MIR -67 195 10 184 308 19 0 chr2 126082153 126082205 -124605649 + MER5A DNA MER1_type 1 53 -136 186 43 0 0 chr2 126082221 126082244 -124605610 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1565 234 23 3 chr2 126084743 126085097 -124602757 - MLT1A1 LTR MaLR -2 363 3 573 217 0 0 chr2 126085539 126085714 -124602140 + (CA)n Simple_repeat Simple_repeat 2 176 0 206 217 28 19 chr2 126085766 126085872 -124601982 + CT-rich Low_complexity Low_complexity 4 110 0 215 250 0 0 chr2 126087042 126087094 -124600760 + (TA)n Simple_repeat Simple_repeat 2 53 0 465 190 19 63 chr2 126087735 126087893 -124599961 - MER104 DNA Tc2 -1 179 29 23 54 0 0 chr2 126088040 126088077 -124599777 + AT_rich Low_complexity Low_complexity 1 37 0 517 291 46 0 chr2 126088201 126088352 -124599502 + MLT1G LTR MaLR 10 167 -423 7808 193 47 18 chr2 126088948 126090843 -124597011 + L1MA9 LINE L1 3454 5413 -899 1578 167 68 44 chr2 126090843 126091209 -124596645 - THE1C LTR MaLR 0 375 1 7808 193 47 18 chr2 126091209 126091423 -124596431 + L1MA9 LINE L1 5413 5619 -693 208 146 55 18 chr2 126091423 126091478 -124596376 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 2148 162 24 0 chr2 126091501 126091871 -124595983 + L1MA9 LINE L1 5787 6165 -147 353 204 26 9 chr2 126091879 126091992 -124595862 + GA-rich Low_complexity Low_complexity 2 116 0 785 102 66 0 chr2 126092001 126092138 -124595716 + L1MA9 LINE L1 6167 6312 0 189 0 0 0 chr2 126092484 126092505 -124595349 + (A)n Simple_repeat Simple_repeat 1 21 0 656 234 85 0 chr2 126093009 126093150 -124594704 + MER21B LTR ERV1 330 482 -381 1461 220 11 55 chr2 126093186 126093244 -124594610 + MLT1B LTR MaLR 36 95 -295 1984 132 0 4 chr2 126093244 126093565 -124594289 - AluSc SINE Alu 0 320 1 1461 220 11 55 chr2 126093565 126093868 -124593986 + MLT1B LTR MaLR 95 382 -8 1960 204 23 13 chr2 126093878 126094473 -124593381 + MLT1B-int LTR MaLR 4 723 -648 266 182 0 0 chr2 126094481 126094536 -124593318 + MLT1B-int LTR MaLR 829 883 -488 1818 236 38 7 chr2 126094783 126095258 -124592596 + MLT1B-int LTR MaLR 956 1735 0 1299 253 13 35 chr2 126095258 126095653 -124592201 + MLT1B LTR MaLR 1 386 -4 2072 119 3 22 chr2 126095880 126096232 -124591622 - AluSx SINE Alu 0 312 1 193 200 86 0 chr2 126097199 126097234 -124590620 - MIR SINE MIR -57 151 114 281 381 44 12 chr2 126098127 126098287 -124589567 - MIR SINE MIR -10 252 88 1735 126 0 16 chr2 126098468 126098723 -124589131 - AluSc SINE Alu -14 295 45 24 77 0 0 chr2 126099183 126099235 -124588619 + AT_rich Low_complexity Low_complexity 1 52 0 394 356 0 61 chr2 126099751 126099931 -124587923 + MER5A DNA MER1_type 21 189 0 33 66 0 0 chr2 126100888 126100949 -124586905 + AT_rich Low_complexity Low_complexity 1 61 0 22 0 0 0 chr2 126101281 126101303 -124586551 + AT_rich Low_complexity Low_complexity 1 22 0 609 275 135 9 chr2 126101600 126101801 -124586053 + MLT1J LTR MaLR 2 235 -276 895 52 0 0 chr2 126101801 126101916 -124585938 + L1PA5 LINE L1 6040 6154 0 609 275 135 9 chr2 126101916 126101936 -124585918 + MLT1J LTR MaLR 235 251 -260 288 278 67 56 chr2 126102150 126102240 -124585614 + L2 LINE L2 3173 3263 -9 25 0 0 0 chr2 126102755 126102780 -124585074 + AT_rich Low_complexity Low_complexity 1 25 0 1967 143 7 0 chr2 126103753 126104040 -124583814 + AluSx SINE Alu 1 289 -23 1332 28 11 11 chr2 126104047 126104225 -124583629 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 413 145 13 0 chr2 126104225 126104301 -124583553 + GA-rich Low_complexity Low_complexity 1 77 0 789 151 12 48 chr2 126104354 126104520 -124583334 + MLT1A1 LTR MaLR 1 160 -205 879 171 7 13 chr2 126104531 126104683 -124583171 + FRAM SINE Alu 14 164 -12 1160 220 0 0 chr2 126104687 126104896 -124582958 + MLT1A1 LTR MaLR 157 365 0 701 244 86 14 chr2 126104951 126105160 -124582694 + MIR SINE MIR 4 227 -35 417 280 96 25 chr2 126105220 126105377 -124582477 + MLT1L LTR MaLR 74 241 -374 245 219 60 126 chr2 126105525 126105580 -124582274 + MLT1L LTR MaLR 475 532 -83 1560 138 29 4 chr2 126105580 126105740 -124582114 - AluSc SINE Alu -22 287 118 207 0 0 0 chr2 126105740 126105763 -124582091 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1560 138 29 4 chr2 126105763 126105841 -124582013 - AluSc SINE Alu -191 118 43 245 219 60 126 chr2 126105841 126105936 -124581918 + MLT1L LTR MaLR 532 615 0 32 0 0 0 chr2 126106114 126106146 -124581708 + AT_rich Low_complexity Low_complexity 1 32 0 2137 116 0 0 chr2 126106146 126106438 -124581416 - AluSg SINE Alu -18 292 1 186 426 12 12 chr2 126106608 126106777 -124581077 - L2 LINE L2 -1347 1967 1799 527 169 81 37 chr2 126107119 126107255 -124580599 + Charlie8 DNA MER1_type 42 183 -2234 829 191 80 157 chr2 126107537 126108039 -124579815 + LTR37B LTR ERV1 6 468 0 366 23 0 0 chr2 126108169 126108212 -124579642 + (CA)n Simple_repeat Simple_repeat 1 43 0 318 318 168 11 chr2 126108981 126109255 -124578599 + LTR33 LTR ERVL 168 484 -37 273 319 60 17 chr2 126109682 126109798 -124578056 - MIR SINE MIR -63 145 25 1247 79 0 6 chr2 126110221 126110399 -124577455 + (TTC)n Simple_repeat Simple_repeat 1 177 0 250 288 0 0 chr2 126110405 126110471 -124577383 + CT-rich Low_complexity Low_complexity 1 66 0 2163 90 0 37 chr2 126111030 126111330 -124576524 - AluSx SINE Alu -12 300 12 1907 282 70 27 chr2 126113020 126114070 -124573784 + L2 LINE L2 2217 3313 0 1034 267 40 35 chr2 126114691 126115065 -124572789 + L2 LINE L2 2347 2722 -592 319 303 91 15 chr2 126115269 126115401 -124572453 - MIR SINE MIR -108 154 13 1810 189 0 3 chr2 126116845 126117151 -124570703 + AluJo SINE Alu 1 305 -7 2158 127 0 0 chr2 126118046 126118345 -124569509 - AluSx SINE Alu -13 299 1 264 222 106 81 chr2 126118492 126118690 -124569164 + L1ME LINE L1 5616 5818 -303 185 250 25 0 chr2 126118862 126118942 -124568912 + (CATA)n Simple_repeat Simple_repeat 2 83 0 267 315 43 45 chr2 126122640 126122815 -124565039 + MIR SINE MIR 28 209 -53 345 228 74 68 chr2 126125092 126125182 -124562672 - MER103 DNA DNA -1 165 72 180 0 0 0 chr2 126125182 126125202 -124562652 + (CA)n Simple_repeat Simple_repeat 1 20 0 345 228 74 68 chr2 126125202 126125273 -124562581 - MER103 DNA DNA -94 72 3 354 283 62 45 chr2 126125406 126125583 -124562271 + MER5A DNA MER1_type 1 180 -9 580 267 0 22 chr2 126125621 126125756 -124562098 - FLAM_A SINE Alu -1 132 1 364 113 19 0 chr2 126126854 126126907 -124560947 - MER3 DNA MER1_type 0 209 156 292 301 0 0 chr2 126127471 126127544 -124560310 + MIR SINE MIR 73 145 -63 386 312 58 7 chr2 126128915 126129069 -124558785 - L2 LINE L2 -212 3060 2899 180 172 0 0 chr2 126129262 126129291 -124558563 + L2 LINE L2 3226 3254 -18 214 293 112 52 chr2 126130722 126130838 -124557016 + L2 LINE L2 3118 3240 -32 255 31 0 0 chr2 126130858 126130890 -124556964 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 278 307 40 10 chr2 126130962 126131063 -124556791 + L2 LINE L2 3208 3311 -2 182 309 0 59 chr2 126131976 126132044 -124555810 - MIR SINE MIR -111 151 88 1128 88 6 16 chr2 126132866 126133048 -124554806 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1653 172 24 14 chr2 126133067 126133363 -124554491 - AluSg SINE Alu -11 299 1 361 279 27 9 chr2 126134637 126134748 -124553106 + MIR SINE MIR 35 147 -115 914 178 33 17 chr2 126134762 126134942 -124552912 - MER5A DNA MER1_type -2 187 5 2085 108 0 46 chr2 126135457 126135781 -124552073 - AluSc SINE Alu 0 309 1 324 257 16 6 chr2 126136159 126136276 -124551578 - L1MA4A LINE L1 0 6280 6034 1459 118 39 47 chr2 126136276 126136531 -124551323 + MER41B LTR ERV1 1 253 -382 931 110 8 0 chr2 126136540 126136667 -124551187 - AluSc SINE Alu -178 131 4 2166 140 6 9 chr2 126136718 126137047 -124550807 + MER41B LTR ERV1 300 627 -8 677 229 117 11 chr2 126137055 126137243 -124550611 - L1PB4 LINE L1 -115 6041 5834 510 196 236 61 chr2 126137806 126137954 -124549900 + MER5A DNA MER1_type 6 179 -10 516 238 98 16 chr2 126137959 126138081 -124549773 + MER96 DNA MER1_type? 44 175 0 188 253 198 0 chr2 126138467 126138558 -124549296 - MIR SINE MIR -70 192 84 2241 139 89 22 chr2 126139019 126139436 -124548418 + LTR56 LTR ERV1 1 445 0 2055 143 3 0 chr2 126140279 126140595 -124547259 + AluSx SINE Alu 1 312 0 13837 132 39 54 chr2 126141718 126141792 -124546062 - Tigger1 DNA MER2_type -24 2394 2320 4420 140 3 2 chr2 126141792 126142426 -124545428 - MER41B LTR ERV1 0 635 1 13837 132 39 54 chr2 126142426 126144783 -124543071 - Tigger1 DNA MER2_type -98 2320 1 1408 215 35 75 chr2 126144784 126145236 -124542618 - MLT1C LTR MaLR -33 434 1 310 267 68 50 chr2 126145330 126145491 -124542363 - L2 LINE L2 -181 3091 2928 549 312 5 11 chr2 126146057 126146243 -124541611 - LTR33 LTR ERVL -331 190 6 1571 184 74 73 chr2 126146986 126147367 -124540487 + MLT2D LTR ERVL 2 480 -40 242 148 0 16 chr2 126147351 126147412 -124540442 + LTR66 LTR ERVL 404 463 -147 * 258 32 0 0 chr2 126147413 126147444 -124540410 + (TA)n Simple_repeat Simple_repeat 1 31 0 184 336 56 28 chr2 126147516 126147623 -124540231 + L2 LINE L2 3056 3165 -107 320 331 130 0 chr2 126148002 126148137 -124539717 + MIR SINE MIR 12 165 -43 233 358 0 0 chr2 126148117 126148184 -124539670 + MIR SINE MIR 86 152 -110 * 381 43 0 0 chr2 126148233 126148280 -124539574 + (CA)n Simple_repeat Simple_repeat 2 48 0 5580 102 4 3 chr2 126149454 126150193 -124537661 - L1PA11 LINE L1 0 6174 5435 198 118 0 0 chr2 126150216 126150250 -124537604 + (CA)n Simple_repeat Simple_repeat 1 34 0 249 351 63 18 chr2 126150615 126150726 -124537128 - L2 LINE L2 -9 3263 3148 276 323 67 30 chr2 126150993 126151157 -124536697 + MIR SINE MIR 70 239 -23 409 324 11 6 chr2 126151866 126152045 -124535809 + (TTCA)n Simple_repeat Simple_repeat 1 180 0 331 316 203 28 chr2 126152357 126152534 -124535320 - MIR SINE MIR -6 256 49 277 277 59 0 chr2 126152728 126152829 -124535025 + MIR SINE MIR 102 208 -54 225 109 55 0 chr2 126152925 126152980 -124534874 + (TATAG)n Simple_repeat Simple_repeat 4 61 0 368 307 0 51 chr2 126153409 126153600 -124534254 + MIR SINE MIR 76 251 -11 24540 169 21 21 chr2 126153787 126160229 -124527625 + L1PA10 LINE L1 10 6482 -1 2037 151 93 16 chr2 126160232 126160609 -124527245 - MSTA LTR MaLR -20 408 3 8914 177 42 45 chr2 126160611 126162021 -124525833 - MSTA-int LTR MaLR 0 1651 245 1593 191 18 11 chr2 126162021 126162303 -124525551 - AluJb SINE Alu -23 289 6 8914 177 42 45 chr2 126162303 126162548 -124525306 - MSTA-int LTR MaLR -1406 245 1 2193 173 70 8 chr2 126162553 126162951 -124524903 - MSTA LTR MaLR -5 423 1 424 284 40 72 chr2 126163649 126163871 -124523983 + MIR SINE MIR 48 262 0 264 77 0 0 chr2 126164145 126164184 -124523670 + (TG)n Simple_repeat Simple_repeat 2 40 0 1129 277 125 75 chr2 126164291 126165557 -124522297 - L1MC4 LINE L1 -1 8041 6526 321 89 0 0 chr2 126165557 126165602 -124522252 + (TG)n Simple_repeat Simple_repeat 2 46 0 1129 277 125 75 chr2 126165602 126166492 -124521362 - L1MC4 LINE L1 -1516 6526 5682 209 150 0 75 chr2 126166899 126166939 -124520915 + L2 LINE L2 3182 3218 -95 22 0 0 0 chr2 126167615 126167637 -124520217 + AT_rich Low_complexity Low_complexity 1 22 0 2312 99 6 3 chr2 126168349 126168661 -124519193 + AluSp SINE Alu 1 313 0 271 294 37 22 chr2 126168761 126168897 -124518957 - MIR3 SINE MIR -68 140 3 192 77 0 0 chr2 126169795 126169821 -124518033 + (TG)n Simple_repeat Simple_repeat 2 27 0 277 327 55 9 chr2 126171260 126171370 -124516484 - MIR SINE MIR -119 143 29 294 288 68 38 chr2 126171417 126171549 -124516305 - MIR SINE MIR -126 136 1 259 284 0 0 chr2 126172000 126172067 -124515787 + (TGAA)n Simple_repeat Simple_repeat 3 69 0 276 30 0 0 chr2 126172399 126172432 -124515422 + (CA)n Simple_repeat Simple_repeat 1 33 0 1482 196 57 11 chr2 126172803 126173084 -124514770 + AluJo SINE Alu 1 294 -18 2189 142 82 17 chr2 126173196 126173598 -124514256 - MSTA LTR MaLR 0 428 1 339 345 26 63 chr2 126173623 126173814 -124514040 - MIR3 SINE MIR -23 185 2 292 222 24 127 chr2 126173896 126174022 -124513832 + MIR3 SINE MIR 85 197 -11 970 169 0 19 chr2 126174331 126174491 -124513363 + FRAM SINE Alu 1 157 -9 408 296 26 0 chr2 126174855 126174970 -124512884 + MIR SINE MIR 31 148 -114 218 122 24 0 chr2 126176135 126176176 -124511678 + A-rich Low_complexity Low_complexity 2 43 0 489 354 38 13 chr2 126177118 126177355 -124510499 + MIR SINE MIR 13 255 -7 844 245 49 20 chr2 126178272 126178578 -124509276 - L1ME LINE L1 -297 5824 5510 269 333 54 9 chr2 126178899 126179110 -124508744 - MIR SINE MIR -3 259 40 219 110 16 79 chr2 126180856 126180983 -124506871 + (TA)n Simple_repeat Simple_repeat 2 120 0 453 264 187 52 chr2 126181278 126181789 -124506065 - L2 LINE L2 -1 3312 2726 260 229 16 0 chr2 126182209 126182270 -124505584 + CT-rich Low_complexity Low_complexity 3 64 0 258 32 0 0 chr2 126182468 126182499 -124505355 + (TTA)n Simple_repeat Simple_repeat 3 33 0 4124 77 0 2 chr2 126182499 126183042 -124504812 - L1PA8 LINE L1 -18 6154 5613 207 0 0 0 chr2 126183042 126183065 -124504789 + (TA)n Simple_repeat Simple_repeat 2 24 0 1497 226 3 10 chr2 126183120 126183526 -124504328 + AluJo SINE Alu 1 404 0 235 200 0 0 chr2 126183535 126183585 -124504269 + Alu SINE Alu 250 299 0 189 360 12 12 chr2 126183701 126183787 -124504067 - MIR SINE MIR -158 104 19 280 289 13 0 chr2 126184414 126184490 -124503364 + MIR SINE MIR 65 141 -121 348 309 177 38 chr2 126184806 126185337 -124502517 + L2 LINE L2 2373 2977 -337 475 248 47 47 chr2 126185457 126185606 -124502248 + L2 LINE L2 3164 3312 -1 424 305 46 15 chr2 126185713 126185910 -124501944 + MIR3 SINE MIR 6 208 0 374 295 18 9 chr2 126186502 126186614 -124501240 + MIR SINE MIR 45 157 -105 22 0 0 0 chr2 126186930 126186952 -124500902 + AT_rich Low_complexity Low_complexity 1 22 0 671 95 9 0 chr2 126187502 126187607 -124500247 + (GGAA)n Simple_repeat Simple_repeat 4 109 0 1011 196 20 12 chr2 126187923 126188178 -124499676 - Charlie5 DNA MER1_type -27 2585 2329 579 157 0 0 chr2 126188178 126188280 -124499574 - Tigger3b DNA MER2_type -168 1063 962 1247 146 0 0 chr2 126188286 126188478 -124499376 + AluSg/x SINE Alu 121 312 0 4264 155 33 58 chr2 126188489 126189366 -124498488 - Tigger3b DNA MER2_type -2093 935 82 3984 60 67 6 chr2 126189366 126189903 -124497951 - L1PA7 LINE L1 0 6154 5585 4264 155 33 58 chr2 126189903 126189984 -124497870 - Tigger3b DNA MER2_type -2945 83 1 299 250 191 37 chr2 126190014 126190150 -124497704 - MIR SINE MIR -82 180 24 180 286 89 45 chr2 126191493 126191605 -124496249 + L2 LINE L2 3155 3271 -1 1087 162 0 0 chr2 126191684 126191857 -124495997 + FRAM SINE Alu 4 176 0 658 323 58 32 chr2 126191916 126192187 -124495667 - MLT1I LTR MaLR -51 358 75 2229 118 0 0 chr2 126192187 126192491 -124495363 - AluSq SINE Alu -9 304 1 658 323 58 32 chr2 126192491 126192566 -124495288 - MLT1I LTR MaLR -334 75 3 200 227 0 0 chr2 126192592 126192636 -124495218 + A-rich Low_complexity Low_complexity 1 44 0 2441 64 0 0 chr2 126193109 126193404 -124494450 + AluY SINE Alu 1 295 -16 1621 183 29 14 chr2 126193511 126193856 -124493998 - MER4D LTR ERV1 -7 896 547 1278 175 71 21 chr2 126193889 126194169 -124493685 - MER49 LTR ERV1 -629 294 1 1376 286 154 17 chr2 126196766 126197423 -124490431 + L2 LINE L2 1883 2629 -685 643 171 7 7 chr2 126197604 126197744 -124490110 + CT-rich Low_complexity Low_complexity 3 142 0 1022 203 41 6 chr2 126197746 126198126 -124489728 - L1M4 LINE L1 -686 5488 5090 678 309 77 31 chr2 126198187 126198540 -124489314 + L2 LINE L2 2923 3291 -22 269 250 22 14 chr2 126198854 126198941 -124488913 + MIR SINE MIR 63 152 -56 2102 155 0 0 chr2 126199134 126199443 -124488411 - AluSx SINE Alu -3 309 1 1797 203 29 13 chr2 126199499 126199883 -124487971 - MLT1B LTR MaLR 0 390 1 315 272 40 10 chr2 126200327 126200529 -124487325 + L1MEd LINE L1 896 1103 -5016 213 313 16 0 chr2 126201201 126201265 -124486589 - MIR SINE MIR -63 145 81 488 237 47 11 chr2 126201347 126201537 -124486317 - L1MB8 LINE L1 -1 6177 5981 631 256 29 4 chr2 126201560 126201833 -124486021 - L1M4 LINE L1 -2832 3812 3533 726 154 0 31 chr2 126201833 126201995 -124485859 + CT-rich Low_complexity Low_complexity 4 160 0 579 29 0 0 chr2 126202013 126202082 -124485772 + (TTTC)n Simple_repeat Simple_repeat 2 70 0 1644 254 66 29 chr2 126202096 126202996 -124484858 - L1M4 LINE L1 -3104 3540 2608 246 287 10 0 chr2 126203022 126203123 -124484731 - L1M4 LINE L1 -4182 2464 2363 3784 250 56 13 chr2 126203242 126204442 -124483412 - L1M4 LINE L1 -5275 1267 17 6156 78 3 43 chr2 126204507 126205367 -124482487 - LTR12 LTR ERV1 0 826 1 292 215 25 125 chr2 126205437 126205637 -124482217 - TAR1 Satellite telomeric -1926 185 6 * 2096 214 21 36 chr2 126205458 126206019 -124481835 - LTR60 LTR ERV1 -31 555 3 378 360 34 73 chr2 126206219 126206452 -124481402 + L2 LINE L2 3044 3267 -5 282 229 164 49 chr2 126206939 126207061 -124480793 - MIR SINE MIR -90 172 37 1577 131 57 46 chr2 126207075 126207357 -124480497 - AluJb SINE Alu -17 295 11 377 312 9 28 chr2 126207663 126207772 -124480082 + L2 LINE L2 2990 3096 -176 417 250 0 52 chr2 126208054 126208190 -124479664 - L1M4b LINE L1 -5371 1175 1047 2141 104 3 53 chr2 126208506 126208824 -124479030 + AluSx SINE Alu 1 302 -10 372 256 12 81 chr2 126208866 126209038 -124478816 - L1M4b LINE L1 -5503 1039 880 1986 136 3 3 chr2 126209056 126209365 -124478489 - AluY SINE Alu -2 309 1 191 59 0 59 chr2 126209366 126209400 -124478454 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 919 261 80 21 chr2 126209423 126209798 -124478056 - L1M4b LINE L1 -5654 888 492 332 311 80 9 chr2 126210050 126210262 -124477592 - L1M4b LINE L1 -6300 242 16 1296 129 0 5 chr2 126210893 126211103 -124476751 - L1PB2 LINE L1 -2 6149 5941 776 304 13 4 chr2 126212225 126212462 -124475392 - MIR SINE MIR -15 247 9 222 118 0 0 chr2 126213243 126213277 -124474577 + (TG)n Simple_repeat Simple_repeat 2 35 0 441 236 118 21 chr2 126214039 126214275 -124473579 + MLT1H1 LTR MaLR 290 589 -1 563 197 26 0 chr2 126214412 126214529 -124473325 + MER3 DNA MER1_type 1 120 -89 389 349 89 57 chr2 126216643 126216993 -124470861 - L2 LINE L2 -10 3262 2902 218 297 8 0 chr2 126217053 126217181 -124470673 + (TG)n Simple_repeat Simple_repeat 2 130 0 243 289 13 26 chr2 126217929 126218005 -124469849 + L2 LINE L2 2585 2659 -655 284 301 27 46 chr2 126218098 126218317 -124469537 + L2 LINE L2 2855 3069 -203 2950 169 40 40 chr2 126218392 126219042 -124468812 - MER39B LTR ERV1 0 653 4 235 301 0 14 chr2 126219122 126219195 -124468659 + L2 LINE L2 3201 3272 0 359 319 80 14 chr2 126219369 126219582 -124468272 + MLT1H LTR MaLR 79 305 -244 965 211 50 0 chr2 126219750 126219949 -124467905 + MER58A DNA MER1_type 1 209 -15 245 140 53 35 chr2 126219960 126220017 -124467837 + MLT1H LTR MaLR 498 555 0 291 349 46 33 chr2 126220571 126220723 -124467131 + MIR SINE MIR 2 155 -107 254 292 83 31 chr2 126221044 126221140 -124466714 - MIR SINE MIR 0 262 162 297 174 0 0 chr2 126221299 126221368 -124466486 + A-rich Low_complexity Low_complexity 1 69 0 22 0 0 0 chr2 126221722 126221744 -124466110 + AT_rich Low_complexity Low_complexity 1 22 0 391 270 54 18 chr2 126221791 126221902 -124465952 - MIR SINE MIR -140 122 8 2875 227 74 19 chr2 126222099 126222508 -124465346 + MER63C DNA MER1_type 2 387 -673 261 0 0 0 chr2 126222508 126222537 -124465317 + (TG)n Simple_repeat Simple_repeat 2 30 0 2875 227 74 19 chr2 126222537 126223008 -124464846 + MER63C DNA MER1_type 387 930 0 282 352 44 44 chr2 126223358 126223540 -124464314 - MIR SINE MIR -33 229 48 1643 190 24 13 chr2 126224603 126224982 -124462872 - L1MC3 LINE L1 0 7785 7403 186 191 167 0 chr2 126225307 126225349 -124462505 - L2 LINE L2 -14 3258 3210 * 448 270 40 20 chr2 126225317 126225465 -124462389 - MIR SINE MIR -25 237 87 366 366 28 14 chr2 126225517 126225730 -124462124 - L2 LINE L2 -471 2843 2628 288 0 0 0 chr2 126225889 126225921 -124461933 + (CA)n Simple_repeat Simple_repeat 2 33 0 569 240 114 0 chr2 126226455 126226630 -124461224 + MER3 DNA MER1_type 12 206 -3 389 65 65 13 chr2 126227287 126227364 -124460490 + CT-rich Low_complexity Low_complexity 3 83 0 3612 191 19 14 chr2 126227364 126228140 -124459714 - L1MB7 LINE L1 -23 6161 5382 342 238 0 16 chr2 126228160 126228286 -124459568 - L1MB7 LINE L1 -826 5320 5197 3664 206 19 43 chr2 126228307 126228361 -124459493 - L1MA9 LINE L1 -37 6275 6221 546 100 0 0 chr2 126228361 126228441 -124459413 + MADE1 DNA Mariner 1 80 0 3664 206 19 43 chr2 126228441 126229389 -124458465 - L1MA9 LINE L1 -91 6221 5297 26 30 0 0 chr2 126229458 126229491 -124458363 + AT_rich Low_complexity Low_complexity 1 33 0 432 0 0 0 chr2 126229860 126229908 -124457946 + (T)n Simple_repeat Simple_repeat 1 48 0 1020 160 3 3 chr2 126230265 126230613 -124457241 + CT-rich Low_complexity Low_complexity 1 349 0 1979 177 0 0 chr2 126230615 126230926 -124456928 - AluSx SINE Alu -1 311 1 378 252 35 42 chr2 126231770 126231835 -124456019 - L2 LINE L2 -3 3310 3246 2260 116 0 0 chr2 126231835 126232145 -124455709 - AluSx SINE Alu -2 310 1 378 252 35 42 chr2 126232145 126232222 -124455632 - L2 LINE L2 -67 3246 3169 740 168 23 0 chr2 126234122 126234295 -124453559 + GA-rich Low_complexity Low_complexity 4 180 0 201 22 0 89 chr2 126234994 126235039 -124452815 + (TAAAAA)n Simple_repeat Simple_repeat 2 42 0 366 23 0 0 chr2 126235303 126235346 -124452508 + (TG)n Simple_repeat Simple_repeat 1 43 0 216 0 0 0 chr2 126235345 126235369 -124452485 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 27 0 0 0 chr2 126235948 126235975 -124451879 + AT_rich Low_complexity Low_complexity 1 27 0 1502 178 0 30 chr2 126238784 126239048 -124448806 - AluSx SINE Alu -24 288 33 441 0 0 0 chr2 126239173 126239222 -124448632 + (TG)n Simple_repeat Simple_repeat 2 50 0 964 286 59 12 chr2 126240466 126240872 -124446982 + LTR16A LTR ERVL 21 445 -5 210 244 0 0 chr2 126240900 126240941 -124446913 + (CA)n Simple_repeat Simple_repeat 2 42 0 307 295 11 0 chr2 126241452 126241547 -124446307 + MIR SINE MIR 61 156 -106 215 310 103 9 chr2 126242537 126242653 -124445201 - L2 LINE L2 -4 3268 3142 1285 266 156 9 chr2 126244081 126244631 -124443223 + L1ME3A LINE L1 5504 6134 -36 212 191 21 0 chr2 126245543 126245590 -124442264 + GA-rich Low_complexity Low_complexity 3 50 0 282 95 0 0 chr2 126246439 126246481 -124441373 + (A)n Simple_repeat Simple_repeat 1 42 0 641 236 70 42 chr2 126246595 126246836 -124441018 - MER102a DNA MER1_type -10 320 73 1541 167 3 87 chr2 126247351 126247674 -124440180 + AluJo SINE Alu 1 296 -16 1124 104 12 0 chr2 126247685 126247708 -124440146 + (GAAA)n Simple_repeat Simple_repeat 1 198 0 1124 104 12 0 chr2 126247708 126247881 -124439973 + (GAAA)n Simple_repeat Simple_repeat 3 177 0 1626 154 23 99 chr2 126249986 126250330 -124437524 - AluYb8 SINE Alu 0 318 1 274 292 157 39 chr2 126250333 126250511 -124437343 - MIR SINE MIR -62 200 2 1910 134 15 15 chr2 126250790 126251125 -124436729 - L1PA13 LINE L1 0 6163 5829 21 0 0 0 chr2 126251167 126251188 -124436666 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 126252411 126252433 -124435421 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr2 126253087 126253110 -124434744 + (T)n Simple_repeat Simple_repeat 1 23 0 185 256 0 0 chr2 126253738 126253777 -124434077 - MIR SINE MIR -83 125 87 3856 212 32 18 chr2 126253918 126255163 -124432691 - L1MB7 LINE L1 -17 6167 4904 34 79 0 0 chr2 126255241 126255317 -124432537 + AT_rich Low_complexity Low_complexity 1 76 0 231 377 38 25 chr2 126255602 126255841 -124432013 + MIR SINE MIR 21 262 0 746 251 74 20 chr2 126256032 126256382 -124431472 - L1MC5 LINE L1 -25 7936 7568 284 44 44 0 chr2 126256890 126256935 -124430919 + (TTTTG)n Simple_repeat Simple_repeat 3 49 0 1952 143 4 0 chr2 126256935 126257214 -124430640 - AluSx SINE Alu -32 280 1 22 0 0 0 chr2 126257522 126257544 -124430310 + AT_rich Low_complexity Low_complexity 1 22 0 396 303 85 24 chr2 126258453 126258664 -124429190 - MIR SINE MIR -32 230 7 322 341 30 18 chr2 126259396 126259560 -124428294 + MIR SINE MIR 74 239 -23 30 0 0 0 chr2 126260580 126260610 -124427244 + AT_rich Low_complexity Low_complexity 1 30 0 190 310 70 50 chr2 126261597 126261697 -124426157 - MIR SINE MIR -76 132 31 210 71 0 0 chr2 126261903 126261931 -124425923 + (CA)n Simple_repeat Simple_repeat 1 28 0 299 266 283 34 chr2 126261941 126262118 -124425736 - MIR SINE MIR -28 234 14 843 48 0 0 chr2 126262384 126262487 -124425367 - MER4E LTR ERV1 -48 718 616 606 352 89 9 chr2 126262805 126263143 -124424711 + L3 LINE CR1 1210 1574 -3 188 372 0 64 chr2 126263605 126263699 -124424155 + L2 LINE L2 3031 3118 -154 214 333 67 0 chr2 126264273 126264363 -124423491 - L2 LINE L2 -8 3305 3210 1297 69 51 11 chr2 126264382 126264557 -124423297 + AluY SINE Alu 1 182 -129 695 64 21 0 chr2 126264657 126264751 -124423103 + AluY SINE Alu 204 299 -12 270 306 14 0 chr2 126264859 126264931 -124422923 - L2 LINE L2 -214 3058 2986 912 209 23 65 chr2 126266110 126266429 -124421425 + MLT1A2 LTR MaLR 60 384 -6 1316 188 58 78 chr2 126267378 126267776 -124420078 - MLT1B LTR MaLR 0 390 1 183 250 29 58 chr2 126268444 126268548 -124419306 + MIR SINE MIR 115 215 -47 21 36 0 0 chr2 126268632 126268660 -124419194 + AT_rich Low_complexity Low_complexity 1 28 0 734 288 14 14 chr2 126269154 126269366 -124418488 - MIR SINE MIR -2 260 49 1852 137 60 0 chr2 126270051 126270335 -124417519 + AluSg SINE Alu 1 301 -9 324 297 65 67 chr2 126270583 126271105 -124416749 + HAL1 LINE L1 502 1022 -1485 360 0 0 0 chr2 126271108 126271148 -124416706 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 814 179 14 0 chr2 126271150 126271295 -124416559 - FRAM SINE Alu -30 146 1 624 270 238 27 chr2 126271297 126271866 -124415988 + HAL1 LINE L1 1018 1764 -743 671 266 181 44 chr2 126271866 126272340 -124415514 - MLT1F LTR MaLR -3 539 1 624 270 238 27 chr2 126272340 126272471 -124415383 + HAL1 LINE L1 1764 1866 -641 562 252 55 64 chr2 126272476 126272694 -124415160 + MER20 DNA MER1_type 1 216 -3 327 256 160 18 chr2 126272908 126273127 -124414727 + HAL1 LINE L1 2253 2502 -5 180 77 0 0 chr2 126273324 126273350 -124414504 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2100 114 0 3 chr2 126273382 126273672 -124414182 + AluSq SINE Alu 1 289 -24 37 0 0 0 chr2 126273672 126273709 -124414145 + AT_rich Low_complexity Low_complexity 1 37 0 465 75 93 0 chr2 126273709 126273870 -124413984 + (TA)n Simple_repeat Simple_repeat 1 176 0 2900 148 22 25 chr2 126274023 126274642 -124413212 + MER4B LTR ERV1 1 779 0 2436 84 0 3 chr2 126274762 126275071 -124412783 - AluY SINE Alu -3 308 1 210 71 0 0 chr2 126275073 126275101 -124412753 + (T)n Simple_repeat Simple_repeat 1 28 0 306 327 62 98 chr2 126275117 126276078 -124411776 + L2 LINE L2 2174 3091 -181 207 100 0 0 chr2 126277399 126277429 -124410425 + (TTTTC)n Simple_repeat Simple_repeat 1 30 0 1366 269 58 68 chr2 126277820 126278168 -124409686 - MLT1E LTR MaLR 0 593 252 2339 118 0 0 chr2 126278168 126278473 -124409381 - AluSq SINE Alu -8 305 1 1366 269 58 68 chr2 126278473 126278723 -124409131 - MLT1E LTR MaLR -341 252 1 531 246 94 8 chr2 126278771 126279015 -124408839 + L1ME3A LINE L1 5803 6067 -103 297 289 41 0 chr2 126279146 126279243 -124408611 + MIR3 SINE MIR 82 182 -26 181 299 30 15 chr2 126279367 126279434 -124408420 + MIR SINE MIR 62 129 -133 400 283 35 14 chr2 126279521 126279666 -124408188 + MER97a DNA MER1_type? 14 161 -733 1049 180 4 62 chr2 126279993 126280237 -124407617 + AluJo SINE Alu 61 290 -22 213 280 50 60 chr2 126280278 126280496 -124407358 + L2 LINE L2 2523 2738 -576 377 280 120 106 chr2 126280576 126281001 -124406853 + L2 LINE L2 2881 3311 -2 287 318 34 84 chr2 126282456 126282695 -124405159 - MLT1I LTR MaLR -26 383 157 802 274 0 27 chr2 126283059 126283245 -124404609 - MER5A DNA MER1_type -8 181 1 860 243 6 0 chr2 126283407 126283588 -124404266 + MER5A DNA MER1_type 2 183 -6 235 267 0 0 chr2 126283662 126283707 -124404147 + MER5A DNA MER1_type 55 99 -90 255 317 0 20 chr2 126285333 126285434 -124402420 + MIR SINE MIR 41 139 -69 2219 121 3 0 chr2 126285607 126285913 -124401941 - AluSq SINE Alu -6 307 1 634 213 11 86 chr2 126288253 126288427 -124399427 + MER5A DNA MER1_type 1 161 -28 1673 217 0 10 chr2 126288606 126288919 -124398935 - AluJb SINE Alu -2 310 1 2260 121 0 0 chr2 126289895 126290201 -124397653 + AluY SINE Alu 1 306 -5 306 0 0 0 chr2 126290431 126290465 -124397389 + (A)n Simple_repeat Simple_repeat 1 34 0 22 56 0 0 chr2 126290474 126290510 -124397344 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr2 126290551 126290584 -124397270 + AT_rich Low_complexity Low_complexity 1 33 0 834 216 0 11 chr2 126290964 126291154 -124396700 + AluY SINE Alu 119 306 -5 2692 158 70 0 chr2 126291401 126291915 -124395939 - LTR64 LTR ERVK -8 550 1 394 250 73 66 chr2 126292357 126292629 -124395225 - LOR1-int LTR ERV1 -1729 3207 2990 440 197 51 39 chr2 126292778 126292934 -124394920 - LOR1-int LTR ERV1 -1867 4178 3925 * 1023 178 42 23 chr2 126292932 126293191 -124394663 - LOR1-int LTR ERV1 -2605 3993 3730 880 148 10 45 chr2 126293271 126293473 -124394381 - LOR1-int LTR ERV1 -2868 3730 3536 4403 177 43 57 chr2 126293556 126295104 -124392750 - LOR1-int LTR ERV1 -4280 2478 790 * 4412 187 39 56 chr2 126294328 126295534 -124392320 - LTR57-int LTR ERVL -3747 1596 412 1725 199 10 0 chr2 126295544 126295851 -124392003 - AluJb SINE Alu 0 312 3 2785 167 40 15 chr2 126296117 126296661 -124391193 - LTR64 LTR ERVK 0 558 1 322 301 147 0 chr2 126296726 126296869 -124390985 - MIR SINE MIR -87 175 12 180 0 0 0 chr2 126297437 126297457 -124390397 + (TA)n Simple_repeat Simple_repeat 1 20 0 394 275 58 0 chr2 126297571 126297709 -124390145 + MIR SINE MIR 85 230 -32 268 257 147 0 chr2 126298351 126298460 -124389394 - MIR SINE MIR -57 205 81 2205 190 16 8 chr2 126399349 126399838 -124288016 - L1P LINE L1 -2597 3549 3057 4663 195 25 9 chr2 126399853 126400833 -124287021 + L1P LINE L1 4289 5283 -863 5955 115 7 2 chr2 126400833 126401937 -124285917 + L1PA14 LINE L1 5051 6158 -3 574 243 108 27 chr2 126402830 126403015 -124284839 + MER3 DNA MER1_type 9 208 -1 2191 124 0 0 chr2 126403019 126403325 -124284529 - AluSg SINE Alu -4 306 1 22 0 0 0 chr2 126403342 126403364 -124284490 + AT_rich Low_complexity Low_complexity 1 22 0 219 184 41 31 chr2 126403392 126403490 -124284364 + (TTATA)n Simple_repeat Simple_repeat 1 99 0 1155 271 43 34 chr2 126404289 126404703 -124283151 + MLT1C LTR MaLR 50 467 0 4782 221 24 87 chr2 126404704 126406115 -124281739 + MLT1C-int LTR MaLR 2 1323 -48 975 267 100 25 chr2 126406159 126406590 -124281264 + MLT1C LTR MaLR 5 467 0 186 133 0 0 chr2 126406733 126406763 -124281091 + (TATATG)n Simple_repeat Simple_repeat 2 31 0 1546 182 24 14 chr2 126406764 126407060 -124280794 - AluJo SINE Alu -11 301 3 26 30 0 0 chr2 126407824 126407857 -124279997 + AT_rich Low_complexity Low_complexity 1 33 0 505 153 9 9 chr2 126408094 126408205 -124279649 + (TA)n Simple_repeat Simple_repeat 2 112 0 408 347 75 15 chr2 126409948 126410213 -124277641 + L1ME LINE L1 4537 4817 -1329 840 312 60 16 chr2 126410363 126411115 -124276739 + L1ME LINE L1 4968 5769 -393 22 0 0 0 chr2 126411188 126411210 -124276644 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr2 126411286 126411334 -124276520 + AT_rich Low_complexity Low_complexity 1 48 0 209 171 0 0 chr2 126413482 126413517 -124274337 + (CA)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr2 126413613 126413638 -124274216 + AT_rich Low_complexity Low_complexity 1 25 0 186 370 20 50 chr2 126414627 126414727 -124273127 - MIR3 SINE MIR -5 203 107 325 297 59 10 chr2 126415912 126416013 -124271841 - MIR3 SINE MIR -19 189 84 181 287 117 0 chr2 126416469 126416563 -124271291 - MIR SINE MIR -70 192 88 233 391 25 25 chr2 126417350 126417511 -124270343 + MIR SINE MIR 21 181 -81 2300 273 82 43 chr2 126417514 126417624 -124270230 + L1MEc LINE L1 234 338 -6269 190 0 67 0 chr2 126417624 126417654 -124270200 + (TAGA)n Simple_repeat Simple_repeat 1 32 0 2300 273 82 43 chr2 126417654 126418694 -124269160 + L1MEc LINE L1 338 1430 -5177 374 289 39 10 chr2 126418744 126418948 -124268906 + L1MEc LINE L1 1355 1564 -4862 392 250 184 7 chr2 126419119 126419271 -124268583 + L1MEc LINE L1 1788 1966 -4641 1071 237 115 9 chr2 126419868 126420225 -124267629 - L1MD2 LINE L1 -3 6356 5937 2720 262 81 72 chr2 126420247 126420688 -124267166 - L1MDb LINE L1 -4369 2037 1601 2066 135 3 0 chr2 126420688 126420999 -124266855 - AluSx SINE Alu 0 312 1 2720 262 81 72 chr2 126420999 126422625 -124265229 - L1MDb LINE L1 -4805 1601 16 22 35 0 0 chr2 126422970 126422999 -124264855 + AT_rich Low_complexity Low_complexity 1 29 0 309 350 0 0 chr2 126423111 126423208 -124264646 - L2 LINE L2 0 3313 3217 11046 213 43 10 chr2 126423693 126429095 -124258759 - L1MA5A LINE L1 0 6939 1346 2103 154 14 30 chr2 126429133 126429503 -124258351 - THE1B LTR MaLR 0 364 1 10919 120 8 3 chr2 126429508 126431073 -124256781 - THE1B-int LTR MaLR -5 1575 3 2009 140 45 28 chr2 126431077 126431433 -124256421 - THE1B LTR MaLR -2 362 1 4750 297 39 8 chr2 126431441 126433119 -124254735 - L1MA5A LINE L1 -5409 1380 4 365 282 84 64 chr2 126433669 126433967 -124253887 + L1ME3 LINE L1 5006 5309 -837 600 333 86 25 chr2 126433985 126434553 -124253301 + L1ME3 LINE L1 5347 5949 -213 261 239 161 33 chr2 126435871 126436051 -124251803 - MLT1J1 LTR MaLR -231 215 13 273 275 92 35 chr2 126436052 126436194 -124251660 + L2 LINE L2 3141 3290 -23 309 324 34 29 chr2 126436400 126436604 -124251250 - L1ME3A LINE L1 -1 6169 5965 5312 157 40 31 chr2 126436608 126438372 -124249482 - L1MA4A LINE L1 0 6303 4530 645 171 50 21 chr2 126438463 126438603 -124249251 - L1 LINE L1 -1087 5059 4916 219 254 191 9 chr2 126439591 126439701 -124248153 + MIR SINE MIR 121 250 -12 363 379 7 7 chr2 126440801 126440946 -124246908 - L2 LINE L2 -1 3312 3168 227 271 62 10 chr2 126441085 126441181 -124246673 - MLT1L LTR MaLR -345 270 170 436 317 79 23 chr2 126441374 126441678 -124246176 - L1ME3A LINE L1 -289 5877 5558 566 328 98 39 chr2 126441837 126442042 -124245812 - L1ME3A LINE L1 -743 5403 5212 5647 102 39 0 chr2 126442042 126443513 -124244341 - L1PA14 LINE L1 0 6161 4631 566 328 98 39 chr2 126443513 126444197 -124243657 - L1ME3A LINE L1 -934 5212 4456 22 56 0 0 chr2 126446239 126446275 -124241579 + AT_rich Low_complexity Low_complexity 1 36 0 25 65 0 0 chr2 126447009 126447055 -124240799 + AT_rich Low_complexity Low_complexity 1 46 0 26 0 0 0 chr2 126448358 126448384 -124239470 + AT_rich Low_complexity Low_complexity 1 26 0 1829 304 161 20 chr2 126448399 126449798 -124238056 - L2 LINE L2 -1 3312 1708 2089 163 45 45 chr2 126449799 126450257 -124237597 + MER44D DNA MER2_type 1 530 -75 679 166 195 55 chr2 126450286 126450500 -124237354 + THE1A LTR MaLR 113 355 0 440 221 14 76 chr2 126450500 126450586 -124237268 + MER44D DNA MER2_type 533 609 0 222 167 0 0 chr2 126450588 126450630 -124237224 - L2 LINE L2 -1612 1702 1661 23 68 0 0 chr2 126450822 126450866 -124236988 + AT_rich Low_complexity Low_complexity 1 44 0 190 325 0 52 chr2 126452635 126452712 -124235142 - L3 LINE CR1 -1046 531 459 1255 207 38 102 chr2 126453218 126453668 -124234186 - L1MD2 LINE L1 -22 6337 5917 1092 274 145 18 chr2 126453959 126454394 -124233460 - MLT1E2 LTR MaLR 0 626 137 450 49 0 0 chr2 126454505 126454566 -124233288 + (TG)n Simple_repeat Simple_repeat 1 61 0 219 303 45 0 chr2 126455868 126455957 -124231897 - MIR3 SINE MIR -6 202 110 279 248 37 28 chr2 126456153 126456262 -124231592 - HAL1b LINE L1 -41 1307 1198 286 370 117 7 chr2 126457036 126457190 -124230664 - MLT1I LTR MaLR -137 272 102 198 91 0 0 chr2 126458468 126458501 -124229353 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2040 48 0 0 chr2 126458504 126458754 -124229100 - L1PA5 LINE L1 -13 6141 5892 389 365 75 14 chr2 126458889 126459171 -124228683 - MLT1I LTR MaLR -48 361 63 434 237 22 1 chr2 126459238 126459902 -124227952 + (TA)n Simple_repeat Simple_repeat 1 677 0 2259 142 70 25 chr2 126460185 126460690 -124227164 - MLT2A2 LTR ERVL 0 554 1 51 42 0 0 chr2 126461267 126461339 -124226515 + AT_rich Low_complexity Low_complexity 1 72 0 888 319 106 33 chr2 126461419 126462107 -124225747 + L2 LINE L2 2505 3234 -79 216 0 0 0 chr2 126462173 126462197 -124225657 + (TG)n Simple_repeat Simple_repeat 2 25 0 430 241 0 0 chr2 126462245 126462332 -124225522 + Tigger5 DNA MER2_type 2237 2323 0 258 290 10 10 chr2 126462364 126462464 -124225390 + (TA)n Simple_repeat Simple_repeat 2 101 0 232 167 42 0 chr2 126462464 126462512 -124225342 - L1MD3 LINE L1 -1327 6668 6619 228 135 0 0 chr2 126462513 126462550 -124225304 + (TA)n Simple_repeat Simple_repeat 2 38 0 1324 200 18 14 chr2 126462643 126462928 -124224926 - AluJb SINE Alu -26 286 1 1970 109 36 4 chr2 126462951 126463276 -124224578 - AluSc SINE Alu 0 334 1 243 203 0 0 chr2 126463712 126463771 -124224083 + GA-rich Low_complexity Low_complexity 2 60 0 636 214 62 13 chr2 126464014 126464238 -124223616 + Charlie5 DNA MER1_type 2324 2558 -54 1604 224 3 3 chr2 126464422 126464775 -124223079 + L1P LINE L1 3499 3851 -2295 1343 291 33 80 chr2 126464935 126465747 -124222107 - HERVI LTR ERV1 -129 7656 6883 219 313 0 35 chr2 126466232 126466347 -124221507 + CT-rich Low_complexity Low_complexity 1 111 0 6085 25 8 0 chr2 126466347 126467065 -124220789 - L1PA2 LINE L1 0 6155 5432 279 216 0 23 chr2 126467142 126467230 -124220624 - LTR18B LTR ERVL -261 353 268 448 128 58 23 chr2 126467266 126467352 -124220502 - LTR18B LTR ERVL -193 421 333 1047 336 38 31 chr2 126467352 126467824 -124220030 - HERVI LTR ERV1 -5751 2034 1554 2744 24 24 6 chr2 126467824 126468205 -124219649 + L1PA3 LINE L1 5811 6155 0 1047 336 38 31 chr2 126468205 126468472 -124219382 - HERVI LTR ERV1 -6231 1554 1290 469 345 32 8 chr2 126468667 126468919 -124218935 - HERVI LTR ERV1 -6768 1017 760 2488 220 61 47 chr2 126470052 126470246 -124217608 - L1MB5 LINE L1 -164 6508 6318 4250 74 2 0 chr2 126470246 126470798 -124217056 - L1PA7 LINE L1 -4 6150 5598 2488 220 61 47 chr2 126470798 126471645 -124216209 - L1MB5 LINE L1 -354 6318 5429 351 0 0 0 chr2 126471645 126471684 -124216170 + (TG)n Simple_repeat Simple_repeat 2 40 0 2488 220 61 47 chr2 126471684 126471773 -124216081 - L1MB5 LINE L1 -1243 5429 5343 1426 270 86 88 chr2 126471773 126472541 -124215313 - L1MB5 LINE L1 -5321 1221 453 5785 171 52 14 chr2 126472541 126473726 -124214128 + Tigger3b DNA MER2_type 2 1231 0 1426 270 86 88 chr2 126473726 126473861 -124213993 - L1MB5 LINE L1 -6089 453 319 1666 178 34 0 chr2 126473861 126474153 -124213701 + AluJo SINE Alu 1 302 -10 1426 270 86 88 chr2 126474153 126474467 -124213387 - L1MB5 LINE L1 -6223 319 5 216 331 30 45 chr2 126474971 126475104 -124212750 - MIR SINE MIR -20 242 112 22 0 0 0 chr2 126475563 126475585 -124212269 + AT_rich Low_complexity Low_complexity 1 22 0 1644 259 83 7 chr2 126475742 126476023 -124211831 + MLT1D LTR MaLR 16 347 -158 225 65 0 0 chr2 126476023 126476054 -124211800 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1644 259 83 7 chr2 126476054 126476227 -124211627 + MLT1D LTR MaLR 347 505 0 1116 244 14 42 chr2 126476832 126477188 -124210666 - L1MC2 LINE L1 -11 6333 5988 676 190 13 0 chr2 126477148 126477306 -124210548 + CT-rich Low_complexity Low_complexity 6 165 0 * 625 172 17 17 chr2 126477309 126477425 -124210429 - FRAM SINE Alu -66 110 1 273 57 0 0 chr2 126477426 126477461 -124210393 + (TG)n Simple_repeat Simple_repeat 2 36 0 331 125 28 0 chr2 126477470 126477542 -124210312 + (TA)n Simple_repeat Simple_repeat 1 74 0 210 37 0 0 chr2 126477549 126477576 -124210278 + (TG)n Simple_repeat Simple_repeat 2 28 0 441 202 0 0 chr2 126477577 126477661 -124210193 - FLAM_A SINE Alu -13 129 46 180 239 232 22 chr2 126477896 126478034 -124209820 + L2 LINE L2 3137 3303 -10 * 3161 87 21 9 chr2 126478023 126478486 -124209368 + L1PA8 LINE L1 5695 6171 -1 206 346 0 12 chr2 126479528 126479609 -124208245 - MIR SINE MIR -160 102 23 850 88 102 29 chr2 126479856 126480039 -124207815 - AluSx SINE Alu 0 328 136 581 128 0 0 chr2 126480039 126480125 -124207729 - AluSx SINE Alu -227 86 1 181 317 0 17 chr2 126480599 126480659 -124207195 - L2 LINE L2 -9 3304 3246 2187 122 0 0 chr2 126481092 126481395 -124206459 - AluSx SINE Alu -9 303 1 219 382 0 0 chr2 126481417 126481485 -124206369 - MIR SINE MIR -149 113 46 207 218 109 24 chr2 126481709 126481811 -124206043 - MIR SINE MIR -3 259 104 312 27 0 0 chr2 126483160 126483197 -124204657 + (TG)n Simple_repeat Simple_repeat 2 38 0 2382 80 0 10 chr2 126483337 126483651 -124204203 - AluY SINE Alu 0 311 1 560 253 0 129 chr2 126484065 126484182 -124203672 - MIR SINE MIR -13 249 167 8365 86 118 19 chr2 126484182 126485438 -124202416 - SVA Other Other 0 1386 7 560 253 0 129 chr2 126485438 126485522 -124202332 - MIR SINE MIR -95 167 74 350 234 56 28 chr2 126485985 126486092 -124201762 + MIR SINE MIR 97 206 -56 194 0 39 0 chr2 126486470 126486496 -124201358 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr2 126486606 126486629 -124201225 + AT_rich Low_complexity Low_complexity 1 23 0 205 299 149 15 chr2 126488338 126488472 -124199382 - MIR SINE MIR -7 255 104 3453 64 2 4 chr2 126489077 126489527 -124198327 + L1PA7 LINE L1 5315 5763 -391 3814 68 2 4 chr2 126489627 126490129 -124197725 - L1P3 LINE L1 -339 5815 5315 2078 56 37 0 chr2 126490769 126491037 -124196817 + L1PA7 LINE L1 5870 6147 -7 282 125 0 0 chr2 126491465 126491513 -124196341 + (TC)n Simple_repeat Simple_repeat 1 48 0 21 71 0 0 chr2 126492166 126492208 -124195646 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr2 126492429 126492461 -124195393 + AT_rich Low_complexity Low_complexity 1 32 0 355 375 105 33 chr2 126494640 126495154 -124192700 - L3 LINE CR1 -1 1576 1026 231 308 31 82 chr2 126495638 126495797 -124192057 + MIR SINE MIR 56 206 -56 221 393 97 0 chr2 126496842 126497038 -124190816 - MIR SINE MIR -11 251 37 189 74 0 0 chr2 126497827 126497854 -124190000 + (TC)n Simple_repeat Simple_repeat 2 28 0 34 42 0 0 chr2 126498058 126498106 -124189748 + AT_rich Low_complexity Low_complexity 1 48 0 4102 110 39 0 chr2 126498196 126498816 -124189038 - L1PA13 LINE L1 -1 6162 5519 1598 110 70 12 chr2 126498823 126499191 -124188663 + L1P4 LINE L1 5098 5478 -690 261 219 0 0 chr2 126500344 126500417 -124187437 + (CACCAT)n Simple_repeat Simple_repeat 6 78 0 232 335 99 16 chr2 126500438 126500620 -124187234 - MIR SINE MIR -13 249 53 1984 190 41 28 chr2 126502302 126502849 -124185005 + MLT2A2 LTR ERVL 1 554 0 5706 159 25 14 chr2 126502850 126504056 -124183798 - L1MA2 LINE L1 -10 7713 6490 1989 131 34 7 chr2 126504056 126504347 -124183507 + AluSx SINE Alu 1 299 -13 5706 159 25 14 chr2 126504347 126504937 -124182917 - L1MA2 LINE L1 -1233 6490 5908 5425 178 50 26 chr2 126504945 126505204 -124182650 - L1MA2 LINE L1 -5511 2054 1803 405 0 0 0 chr2 126505204 126505249 -124182605 + (TC)n Simple_repeat Simple_repeat 2 46 0 5425 178 50 26 chr2 126505249 126506032 -124181822 - L1MA2 LINE L1 -5762 1803 987 369 0 0 0 chr2 126507343 126507384 -124180470 + (TA)n Simple_repeat Simple_repeat 1 41 0 2432 59 0 0 chr2 126507386 126507674 -124180180 - AluY SINE Alu -23 288 1 357 350 88 53 chr2 126507701 126508098 -124179756 + L1MB3 LINE L1 8 418 -6124 1272 252 86 63 chr2 126508264 126508487 -124179367 + L1MB3 LINE L1 611 827 -5715 183 42 0 0 chr2 126508487 126508511 -124179343 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1272 252 86 63 chr2 126508511 126509150 -124178704 + L1MB3 LINE L1 827 1459 -5083 212 171 0 0 chr2 126509155 126509190 -124178664 + (CATA)n Simple_repeat Simple_repeat 4 38 0 5423 229 55 103 chr2 126509196 126510025 -124177829 + L1MB3 LINE L1 1870 2737 -3944 186 71 0 0 chr2 126510025 126510053 -124177801 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5423 229 55 103 chr2 126510053 126510439 -124177415 + L1MB3 LINE L1 2737 3140 -3541 1803 126 4 0 chr2 126510439 126510700 -124177154 - AluSx SINE Alu -15 297 36 5423 229 55 103 chr2 126510700 126511014 -124176840 + L1MB3 LINE L1 3140 3468 -3213 200 83 0 28 chr2 126511014 126511050 -124176804 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 5423 229 55 103 chr2 126511050 126512006 -124175848 + L1MB3 LINE L1 3468 4468 -2213 7367 30 10 1 chr2 126512006 126513413 -124174441 + L1PA3 LINE L1 4774 6155 0 5423 229 55 103 chr2 126513413 126515797 -124172057 + L1MB3 LINE L1 4468 6618 -63 387 203 16 39 chr2 126515850 126516032 -124171822 + GA-rich Low_complexity Low_complexity 3 180 0 1478 244 15 60 chr2 126517095 126517497 -124170357 - MLT1D LTR MaLR -121 384 1 26 0 0 0 chr2 126517697 126517723 -124170131 + AT_rich Low_complexity Low_complexity 1 26 0 220 219 0 0 chr2 126518111 126518152 -124169702 + (TATATG)n Simple_repeat Simple_repeat 5 45 0 446 313 246 18 chr2 126518236 126518623 -124169231 - L2 LINE L2 -937 2377 1903 371 301 56 25 chr2 126518758 126518954 -124168900 + Charlie8 DNA MER1_type 91 292 -2125 204 366 14 0 chr2 126521082 126521153 -124166701 - L2 LINE L2 -12 3260 3189 6878 194 159 9 chr2 126521161 126521417 -124166437 + MER52A LTR ERV1 3 219 -1536 2094 109 0 3 chr2 126521417 126521746 -124166108 + AluSx SINE Alu 1 328 0 6878 194 159 9 chr2 126521746 126523012 -124164842 + MER52A LTR ERV1 219 1755 0 3362 238 50 22 chr2 126523462 126523847 -124164007 - L1MB8 LINE L1 0 7138 6765 2020 133 10 0 chr2 126523847 126524141 -124163713 - AluSc SINE Alu -12 297 1 3362 238 50 22 chr2 126524141 126524693 -124163161 - L1MB8 LINE L1 -373 6765 6230 2218 75 0 20 chr2 126524693 126525008 -124162846 - AluSx SINE Alu 0 312 6 3362 238 50 22 chr2 126525008 126525573 -124162281 - L1MB8 LINE L1 -908 6230 5579 201 74 0 0 chr2 126525573 126525600 -124162254 + (TA)n Simple_repeat Simple_repeat 2 28 0 3362 238 50 22 chr2 126525600 126525746 -124162108 - L1MB8 LINE L1 -1559 5579 5438 1723 195 7 0 chr2 126525752 126526060 -124161794 - AluSx SINE Alu -2 310 1 1341 269 89 33 chr2 126526060 126526913 -124160941 - L1MB8 LINE L1 -2596 4510 3610 443 200 0 9 chr2 126526919 126527029 -124160825 + (CA)n Simple_repeat Simple_repeat 1 109 0 621 284 29 4 chr2 126527032 126527307 -124160547 - L1MB8 LINE L1 -3493 3613 3332 869 163 43 5 chr2 126527313 126527497 -124160357 - L1 LINE L1 -1820 4326 4136 2591 249 87 47 chr2 126527552 126528562 -124159292 - L1MB8 LINE L1 -5979 1051 1 484 117 13 0 chr2 126528563 126528640 -124159214 - L1MB2 LINE L1 -37 6134 6057 232 192 0 0 chr2 126528642 126528694 -124159160 - L1M1 LINE L1 -684 5619 5568 221 167 0 0 chr2 126528724 126528766 -124159088 + T-rich Low_complexity Low_complexity 1 42 0 * 7237 30 8 2 chr2 126528756 126529632 -124158222 - L1PA13 LINE L1 -1 6162 5282 1762 219 57 8 chr2 126529632 126530259 -124157595 - L1M1 LINE L1 -684 5496 4839 387 41 0 0 chr2 126530360 126530409 -124157445 + (TG)n Simple_repeat Simple_repeat 2 50 0 335 295 8 16 chr2 126530414 126530538 -124157316 - L1M4c LINE L1 -4633 2326 2223 1234 255 35 58 chr2 126530566 126531037 -124156817 - L1M4c LINE L1 -6269 590 4 237 33 0 0 chr2 126531861 126531891 -124155963 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 605 214 0 0 chr2 126531986 126532126 -124155728 + L1M3d LINE L1 1490 1629 -4674 * 1028 302 40 14 chr2 126532117 126532537 -124155317 + L1M3d LINE L1 1170 1600 -4784 963 275 51 43 chr2 126532541 126532786 -124155068 + L1M3d LINE L1 1791 2032 -4352 2044 99 11 0 chr2 126532786 126533091 -124154763 + AluSp SINE Alu 1 308 0 963 275 51 43 chr2 126533091 126533419 -124154435 + L1M3d LINE L1 2032 2379 -4005 391 332 68 16 chr2 126534419 126534609 -124153245 + MIR SINE MIR 62 261 -1 23 68 0 0 chr2 126535044 126535088 -124152766 + AT_rich Low_complexity Low_complexity 1 44 0 198 0 0 0 chr2 126535475 126535497 -124152357 + (TC)n Simple_repeat Simple_repeat 2 23 0 23 54 0 0 chr2 126538905 126538942 -124148912 + AT_rich Low_complexity Low_complexity 1 37 0 336 347 71 5 chr2 126539707 126539903 -124147951 + L1ME LINE L1 17 225 -5845 * 1214 290 84 44 chr2 126539901 126540117 -124147737 + L1M3d LINE L1 3279 3485 -2897 327 85 0 0 chr2 126540117 126540164 -124147690 + (TG)n Simple_repeat Simple_repeat 1 47 0 204 40 0 0 chr2 126540163 126540188 -124147666 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 1214 290 84 44 chr2 126540164 126541128 -124146726 + L1M3d LINE L1 3485 4481 -1901 * 18743 201 43 14 chr2 126541124 126543689 -124144165 + L1M1 LINE L1 11 2501 -5064 1818 80 127 4 chr2 126543689 126543964 -124143890 + AluSg1 SINE Alu 1 309 0 18743 201 43 14 chr2 126543964 126548010 -124139844 + L1M1 LINE L1 2501 6822 -743 1119 189 0 5 chr2 126548016 126548222 -124139632 + LOR1a LTR ERV1 254 458 -39 466 256 74 28 chr2 126548246 126548461 -124139393 + L1M3d LINE L1 4754 4978 -1404 409 311 0 0 chr2 126548938 126549041 -124138813 + L1PA15-16 LINE L1 1472 1574 -5275 * 7156 258 29 19 chr2 126549016 126552301 -124135553 + L1PA16 LINE L1 1336 4752 -2097 3091 198 55 29 chr2 126552307 126552995 -124134859 + L1PA16 LINE L1 6139 6844 -25 2424 266 53 27 chr2 126553084 126554390 -124133464 + L1ME2 LINE L1 4603 5938 -50 434 308 164 5 chr2 126555766 126555961 -124131893 + MIR SINE MIR 31 256 -6 236 178 0 0 chr2 126556350 126556395 -124131459 - MER20 DNA MER1_type -140 79 35 1173 140 122 9 chr2 126556459 126556680 -124131174 + MSTA LTR MaLR 1 246 -182 180 234 0 0 chr2 126557293 126557340 -124130514 + GA-rich Low_complexity Low_complexity 3 49 0 33 80 0 0 chr2 126557486 126557561 -124130293 + AT_rich Low_complexity Low_complexity 1 75 0 1806 144 168 8 chr2 126558047 126558416 -124129438 - MSTA LTR MaLR 0 428 1 24 53 0 0 chr2 126558820 126558858 -124128996 + AT_rich Low_complexity Low_complexity 1 38 0 3852 78 39 0 chr2 126558867 126559381 -124128473 - L1PA8 LINE L1 -21 6151 5618 1011 119 2 1 chr2 126559381 126559539 -124128315 + L1P3 LINE L1 5439 5579 -593 279 206 0 0 chr2 126559532 126559595 -124128259 - L1MB2 LINE L1 -31 6140 6078 * 1422 206 3 20 chr2 126560980 126561276 -124126578 + AluJb SINE Alu 1 291 -11 287 311 79 12 chr2 126561304 126561468 -124126386 - L1M4 LINE L1 -1930 4216 4042 1828 81 12 0 chr2 126562206 126562510 -124125344 + AluY SINE Alu 33 339 0 3236 219 10 52 chr2 126562510 126563409 -124124445 + L1MB3 LINE L1 5325 6183 0 446 298 157 49 chr2 126563433 126563885 -124123969 + L1ME LINE L1 5195 5718 -446 1877 141 35 0 chr2 126563885 126564168 -124123686 - AluSx SINE Alu -19 293 1 446 298 157 49 chr2 126564168 126564286 -124123568 + L1ME LINE L1 5718 5822 -342 218 250 0 38 chr2 126564443 126564523 -124123331 + (TATG)n Simple_repeat Simple_repeat 2 78 0 * 219 200 22 0 chr2 126564479 126564524 -124123330 + (TATATG)n Simple_repeat Simple_repeat 5 50 0 229 246 92 8 chr2 126564524 126564654 -124123200 + LTR37A LTR ERV1 286 426 0 24 0 0 0 chr2 126564665 126564689 -124123165 + AT_rich Low_complexity Low_complexity 1 24 0 2973 155 10 94 chr2 126565286 126565576 -124122278 + MER41D LTR ERV1 1 314 -243 2160 86 10 13 chr2 126565576 126565880 -124121974 + L1PA8 LINE L1 5864 6166 -6 2973 155 10 94 chr2 126565880 126565906 -124121948 + MER41D LTR ERV1 314 341 -216 186 43 0 0 chr2 126565906 126565929 -124121925 + (TA)n Simple_repeat Simple_repeat 2 24 0 2973 155 10 94 chr2 126565929 126566219 -124121635 + MER41D LTR ERV1 341 557 0 37282 50 11 5 chr2 126566722 126572210 -124115644 + L1PA3 LINE L1 623 6149 -6 181 240 60 0 chr2 126572379 126572429 -124115425 - L3 LINE CR1 -151 1426 1374 2577 125 0 5 chr2 126575742 126576119 -124111735 + THE1C LTR MaLR 1 375 0 214 147 0 0 chr2 126576501 126576535 -124111319 + (CA)n Simple_repeat Simple_repeat 2 35 0 1684 148 60 36 chr2 126577395 126577759 -124110095 - THE1C LTR MaLR 0 375 3 187 29 86 0 chr2 126578874 126578909 -124108945 + A-rich Low_complexity Low_complexity 5 42 0 206 312 64 28 chr2 126579043 126579152 -124108702 + MIR SINE MIR 128 240 -22 346 355 16 8 chr2 126579284 126579405 -124108449 - MIR3 SINE MIR -48 160 39 33 25 0 0 chr2 126579408 126579448 -124108406 + AT_rich Low_complexity Low_complexity 1 40 0 35 54 0 0 chr2 126580349 126580405 -124107449 + AT_rich Low_complexity Low_complexity 1 56 0 415 234 218 0 chr2 126581975 126582099 -124105755 - MIR SINE MIR -1 261 111 206 61 0 30 chr2 126582143 126582176 -124105678 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 2111 70 7 11 chr2 126582651 126582937 -124104917 + AluY SINE Alu 27 311 0 1474 317 74 28 chr2 126584072 126584579 -124103275 + L2 LINE L2 1785 2334 -980 2332 91 0 0 chr2 126584579 126584875 -124102979 - AluSg SINE Alu -14 296 1 1474 317 74 28 chr2 126584875 126585073 -124102781 + L2 LINE L2 2334 2522 -792 1872 196 11 18 chr2 126585090 126585399 -124102455 - LTR69 LTR ERVL -16 572 225 1860 142 32 26 chr2 126585399 126585710 -124102144 - AluSq SINE Alu 0 313 1 1872 196 11 18 chr2 126585710 126585934 -124101920 - LTR69 LTR ERVL -363 225 1 469 256 35 103 chr2 126585936 126586139 -124101715 + L2 LINE L2 2522 2710 -604 720 198 0 0 chr2 126586139 126586260 -124101594 + FLAM_C SINE Alu 1 121 -22 754 301 96 50 chr2 126586275 126586849 -124101005 + L2 LINE L2 2701 3313 0 473 302 23 23 chr2 126587007 126587179 -124100675 + MLT1I LTR MaLR 50 221 -188 235 286 0 0 chr2 126587327 126587376 -124100478 + L2 LINE L2 3199 3247 -25 226 214 0 0 chr2 126587640 126587682 -124100172 + GA-rich Low_complexity Low_complexity 3 44 0 541 333 26 10 chr2 126587980 126588172 -124099682 + MIR SINE MIR 32 226 -36 290 302 38 9 chr2 126588202 126588308 -124099546 - MIR SINE MIR -66 196 88 2063 141 35 16 chr2 126588344 126588712 -124099142 - THE1C LTR MaLR 0 375 1 1849 79 7 72 chr2 126588712 126589004 -124098850 - THE1C-int LTR MaLR 0 1580 1308 536 147 64 28 chr2 126589007 126589116 -124098738 - THE1C LTR MaLR -262 113 1 237 224 0 0 chr2 126589962 126590055 -124097799 + (TATG)n Simple_repeat Simple_repeat 1 93 0 1604 277 103 17 chr2 126590079 126590603 -124097251 - MLT1E LTR MaLR 0 593 25 206 391 14 14 chr2 126590711 126590849 -124097005 - MIR3 SINE MIR -68 140 3 314 333 68 0 chr2 126591234 126591366 -124096488 - L2 LINE L2 -8 3305 3165 601 241 45 40 chr2 126591743 126591942 -124095912 - MLT1E LTR MaLR -42 551 352 21 0 0 0 chr2 126591982 126592003 -124095851 + AT_rich Low_complexity Low_complexity 1 21 0 3365 245 27 41 chr2 126593024 126594230 -124093624 + L1MC1 LINE L1 4023 5212 -934 3190 173 52 19 chr2 126594222 126594857 -124092997 + L1MC1 LINE L1 5514 6169 -164 * 3804 160 53 24 chr2 126594857 126595614 -124092240 - LTR1 LTR ERV1 0 785 7 765 177 67 12 chr2 126595627 126595791 -124092063 + L1MC1 LINE L1 6161 6333 0 2330 70 0 7 chr2 126595965 126596295 -124091559 + AluY SINE Alu 6 311 0 357 294 49 55 chr2 126596313 126596476 -124091378 + HAL1 LINE L1 263 424 -2083 981 311 93 43 chr2 126596522 126597786 -124090068 + HAL1 LINE L1 534 1860 -647 1081 53 8 0 chr2 126598156 126598287 -124089567 + AluSg SINE Alu 3 134 -176 1881 123 0 14 chr2 126598287 126598571 -124089283 + AluY SINE Alu 32 311 0 10091 69 1 3 chr2 126598674 126600784 -124087070 - L1PA6 LINE L1 0 6154 4049 343 316 39 24 chr2 126600912 126601118 -124086736 + L1ME LINE L1 2905 3113 -3033 24 67 0 0 chr2 126601294 126601339 -124086515 + AT_rich Low_complexity Low_complexity 1 45 0 2271 118 0 0 chr2 126602315 126602620 -124085234 - AluSx SINE Alu -5 307 3 2346 88 0 0 chr2 126602758 126603055 -124084799 + AluSc SINE Alu 1 297 -12 437 321 61 35 chr2 126603065 126603442 -124084412 + L1ME LINE L1 4915 5301 -845 318 281 105 49 chr2 126603511 126603778 -124084076 + L1ME LINE L1 5386 5667 -503 1035 86 0 7 chr2 126604415 126604555 -124083299 + MER85 DNA T2_type 1 139 0 488 113 25 25 chr2 126605234 126605314 -124082540 + MER85 DNA T2_type 9 88 -51 273 296 69 61 chr2 126605855 126606102 -124081752 + MLT1L LTR MaLR 164 412 -203 330 296 7 59 chr2 126606249 126606384 -124081470 + LTR67 LTR ERVL 97 224 -333 424 266 22 14 chr2 126606500 126606639 -124081215 + LTR67 LTR ERVL 418 557 0 232 360 0 0 chr2 126606673 126606748 -124081106 + MER5B DNA MER1_type 104 178 0 307 333 60 28 chr2 126607637 126607783 -124080071 - MIR SINE MIR -73 135 32 218 301 55 0 chr2 126608115 126608188 -124079666 + L2 LINE L2 3188 3264 -8 213 344 75 0 chr2 126609080 126609173 -124078681 + MIR SINE MIR 80 179 -83 1421 191 77 19 chr2 126609249 126609573 -124078281 + MER2 DNA MER2_type 1 343 -1 460 372 32 12 chr2 126610420 126610670 -124077184 + MIR SINE MIR 8 262 0 654 223 0 0 chr2 126611271 126611392 -124076462 - FLAM_A SINE Alu -11 122 2 252 59 0 0 chr2 126611749 126611783 -124076071 + (A)n Simple_repeat Simple_repeat 1 34 0 2309 88 0 0 chr2 126612109 126612404 -124075450 + AluY SINE Alu 1 295 -16 388 228 20 59 chr2 126613180 126613281 -124074573 - Tigger7 DNA MER2_type 0 2491 2395 5350 150 33 5 chr2 126613292 126614379 -124073475 - L1MA4 LINE L1 -5 6295 5174 1488 179 3 24 chr2 126614377 126614674 -124073180 + L1MA4 LINE L1 4885 5175 -971 * 1468 219 0 7 chr2 126614684 126614953 -124072901 - Tigger7 DNA MER2_type -2220 267 1 22 0 0 0 chr2 126614984 126615006 -124072848 + AT_rich Low_complexity Low_complexity 1 22 0 243 79 0 0 chr2 126616219 126616257 -124071597 + (TA)n Simple_repeat Simple_repeat 2 39 0 1949 126 18 7 chr2 126616816 126617119 -124070735 - AluSx SINE Alu 0 306 1 234 0 0 0 chr2 126617595 126617621 -124070233 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 24 0 0 0 chr2 126618305 126618329 -124069525 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 126618634 126618663 -124069191 + AT_rich Low_complexity Low_complexity 1 29 0 219 69 0 0 chr2 126618773 126618802 -124069052 + (CA)n Simple_repeat Simple_repeat 2 30 0 310 304 48 93 chr2 126618889 126619435 -124068419 + L1ME3A LINE L1 4100 4620 -1526 387 341 70 24 chr2 126619474 126619973 -124067881 + L1ME3A LINE L1 4634 5155 -991 645 306 88 21 chr2 126620098 126620656 -124067198 + L1ME3A LINE L1 5374 5950 -220 237 194 0 0 chr2 126621001 126621037 -124066817 + Tigger3(Golem) DNA MER2_type 2 37 -2992 722 202 65 65 chr2 126621037 126621285 -124066569 - L1MB1 LINE L1 -218 5971 5724 5385 235 36 3 chr2 126621295 126622728 -124065126 + L1 LINE L1 2922 4400 -1746 1243 281 67 45 chr2 126623286 126623866 -124063988 - MLT1E LTR MaLR 0 593 1 335 326 62 0 chr2 126624045 126624174 -124063680 - MIR SINE MIR -55 207 71 207 319 28 0 chr2 126625060 126625132 -124062722 + MIR SINE MIR 168 241 -21 496 193 0 0 chr2 126625494 126625613 -124062241 + L1MCa LINE L1 2351 2469 -3957 1776 135 4 0 chr2 126625620 126625879 -124061975 - AluSx SINE Alu -52 260 1 4758 14 2 0 chr2 126625935 126626879 -124060975 - L1PA2 LINE L1 -380 5775 4831 3313 13 0 0 chr2 126626879 126627255 -124060599 + L1PA2 LINE L1 5771 6146 -9 342 0 0 0 chr2 126627258 126627296 -124060558 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 902 203 157 8 chr2 126627305 126627374 -124060480 + L1MB1 LINE L1 5823 5880 -288 282 29 0 0 chr2 126627374 126627409 -124060445 + (CA)n Simple_repeat Simple_repeat 1 35 0 902 203 157 8 chr2 126627409 126627622 -124060232 + L1MB1 LINE L1 5880 6140 -28 3238 251 15 10 chr2 126627632 126628633 -124059221 + L1MCa LINE L1 2544 3549 -2877 336 287 0 0 chr2 126628705 126628792 -124059062 + HERVL LTR ERVL 4143 4229 -1535 416 81 0 8 chr2 126628807 126628871 -124058983 + L1PA8 LINE L1 6029 6107 -65 510 334 74 28 chr2 126628872 126629389 -124058465 + HERVL LTR ERVL 4226 4785 -724 791 87 61 0 chr2 126629900 126630015 -124057839 + L1PA8 LINE L1 6049 6170 -2 401 301 35 12 chr2 126630016 126630189 -124057665 - Charlie8 DNA MER1_type -2231 186 10 7267 119 106 112 chr2 126630817 126632521 -124055333 + pTR5 LTR ERV1 745 2438 0 28 29 0 0 chr2 126633721 126633756 -124054098 + AT_rich Low_complexity Low_complexity 1 35 0 2134 124 3 0 chr2 126634816 126635122 -124052732 + AluSp SINE Alu 1 307 -6 307 307 21 43 chr2 126635717 126635857 -124051997 + HAL1b LINE L1 1189 1325 -23 226 51 0 26 chr2 126637905 126637939 -124049915 + L1PA6 LINE L1 6112 6145 -5 423 0 0 0 chr2 126637939 126637986 -124049868 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 237 291 39 0 chr2 126638124 126638227 -124049627 + MER113 DNA MER1_type? 306 412 -109 21 0 0 0 chr2 126638346 126638367 -124049487 + AT_rich Low_complexity Low_complexity 1 21 0 1053 226 22 63 chr2 126638888 126639206 -124048648 - MLT1A1 LTR MaLR 0 365 61 1982 180 84 12 chr2 126639206 126639611 -124048243 - MLT2B2 LTR ERVL 0 515 82 336 191 48 0 chr2 126639677 126639761 -124048093 - MLT2B2 LTR ERVL -431 89 2 267 246 14 14 chr2 126639761 126639828 -124048026 - MLT1A1 LTR MaLR -307 67 1 903 166 117 0 chr2 126639976 126640181 -124047673 + L1MA6 LINE L1 6063 6291 -9 276 53 0 0 chr2 126641033 126641071 -124046783 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 331 271 76 21 chr2 126642530 126642674 -124045180 - MIR SINE MIR -78 184 33 1464 203 0 52 chr2 126643182 126643507 -124044347 + AluJo SINE Alu 1 308 -4 2219 92 0 0 chr2 126643669 126644001 -124043853 - AluSg SINE Alu 0 332 1 183 336 78 26 chr2 126644812 126644928 -124042926 + L2 LINE L2 3136 3257 -15 189 0 0 0 chr2 126644929 126644950 -124042904 + (TGAA)n Simple_repeat Simple_repeat 4 24 0 315 0 0 0 chr2 126645096 126645131 -124042723 + (TG)n Simple_repeat Simple_repeat 2 36 0 617 236 90 17 chr2 126645294 126645527 -124042327 - L1M4 LINE L1 -6291 251 2 21 0 0 0 chr2 126645946 126645967 -124041887 + AT_rich Low_complexity Low_complexity 1 21 0 183 80 0 0 chr2 126646256 126646281 -124041573 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 282 243 48 29 chr2 126646299 126646402 -124041452 + L1MCc LINE L1 277 381 -6042 27 29 0 0 chr2 126646779 126646813 -124041041 + AT_rich Low_complexity Low_complexity 1 34 0 654 283 82 61 chr2 126646925 126647816 -124040038 + L1MCc LINE L1 1593 2502 -4620 1960 125 0 0 chr2 126647863 126648135 -124039719 + AluSx SINE Alu 29 300 -12 651 194 21 21 chr2 126648149 126648293 -124039561 + L1PA12 LINE L1 7 150 -7431 22 0 0 0 chr2 126648313 126648335 -124039519 + AT_rich Low_complexity Low_complexity 1 22 0 2492 61 0 7 chr2 126649298 126649608 -124038246 - AluY SINE Alu -2 309 2 422 260 99 49 chr2 126649631 126649854 -124038000 - L1ME3A LINE L1 -9 6161 5928 * 1599 227 63 7 chr2 126649850 126650277 -124037577 + L1ME3A LINE L1 5447 5897 -277 24 53 0 0 chr2 126650585 126650623 -124037231 + AT_rich Low_complexity Low_complexity 1 38 0 3452 146 27 2 chr2 126650735 126651323 -124036531 + LTR26 LTR ERV1 1 603 0 276 328 120 0 chr2 126652217 126652342 -124035512 + L2 LINE L2 3125 3264 -8 23 68 0 0 chr2 126653691 126653735 -124034119 + AT_rich Low_complexity Low_complexity 1 44 0 433 331 12 18 chr2 126654020 126654189 -124033665 + MIR SINE MIR 37 204 -58 244 294 47 12 chr2 126654233 126654318 -124033536 - MIR SINE MIR -157 105 18 1943 147 112 25 chr2 126656418 126656658 -124031196 - MSTA LTR MaLR 0 428 139 2211 100 7 3 chr2 126656658 126656957 -124030897 + AluSc SINE Alu 1 300 -9 1943 147 112 25 chr2 126656957 126657110 -124030744 - MSTA LTR MaLR -289 139 1 3635 251 63 48 chr2 126657115 126657520 -124030334 - L1M4c LINE L1 -4136 2510 2112 8328 124 28 2 chr2 126657520 126658774 -124029080 - HSMAR1 DNA Mariner 0 1287 1 3635 251 63 48 chr2 126658774 126660360 -124027494 - L1M4c LINE L1 -4534 2112 507 30 0 0 0 chr2 126660429 126660459 -124027395 + AT_rich Low_complexity Low_complexity 1 30 0 35 0 0 0 chr2 126662666 126662701 -124025153 + AT_rich Low_complexity Low_complexity 1 35 0 425 332 102 37 chr2 126662862 126663106 -124024748 + MIR SINE MIR 3 262 0 247 375 23 23 chr2 126663280 126663408 -124024446 - MIR SINE MIR -121 141 14 241 286 29 38 chr2 126663836 126663941 -124023913 - L2 LINE L2 -206 3066 2963 973 269 98 21 chr2 126664078 126664464 -124023390 - MLT1F1 LTR MaLR 0 567 152 245 211 14 14 chr2 126664497 126664568 -124023286 - MER53 DNA DNA -14 175 105 565 219 73 20 chr2 126664732 126664883 -124022971 - MLT1F1 LTR MaLR -434 159 1 1076 202 123 74 chr2 126665002 126665334 -124022520 - MLT1B LTR MaLR 0 390 37 553 47 24 0 chr2 126665334 126665419 -124022435 + (TA)n Simple_repeat Simple_repeat 1 87 0 1076 202 123 74 chr2 126665419 126665453 -124022401 - MLT1B LTR MaLR -353 37 6 210 376 21 21 chr2 126666496 126666637 -124021217 + L2 LINE L2 2915 3055 -217 336 296 81 43 chr2 126667258 126667444 -124020410 + MLT1J LTR MaLR 66 258 -253 276 186 0 0 chr2 126667450 126667509 -124020345 + CT-rich Low_complexity Low_complexity 2 60 0 315 0 0 0 chr2 126667524 126667559 -124020295 + (TG)n Simple_repeat Simple_repeat 2 36 0 2211 118 0 13 chr2 126667580 126667893 -124019961 + AluSx SINE Alu 3 311 -1 1229 174 9 0 chr2 126668880 126669093 -124018761 + Tigger5 DNA MER2_type 2109 2323 0 431 250 42 25 chr2 126669238 126669358 -124018496 + MLT1E LTR MaLR 2 123 -470 385 298 0 72 chr2 126669926 126670107 -124017747 + L1MC4 LINE L1 6467 6634 -1408 1307 219 151 0 chr2 126670160 126670485 -124017369 - MSTD LTR MaLR -2 394 21 349 321 27 0 chr2 126670498 126670610 -124017244 + L1MC4a LINE L1 6614 6728 -1080 2022 135 13 0 chr2 126670643 126670947 -124016907 + AluSq SINE Alu 3 310 -3 2498 228 76 40 chr2 126670948 126671724 -124016130 + L1ME1 LINE L1 5317 6120 -46 357 209 45 27 chr2 126671663 126671773 -124016081 + L1MA10 LINE L1 6219 6330 -4 * 2355 253 97 38 chr2 126671884 126673090 -124014764 + L1ME2 LINE L1 4395 5529 -635 234 62 0 0 chr2 126673090 126673122 -124014732 + (CA)n Simple_repeat Simple_repeat 1 32 0 * 246 32 0 0 chr2 126673121 126673152 -124014702 + (GA)n Simple_repeat Simple_repeat 2 32 0 2355 253 97 38 chr2 126673122 126673612 -124014242 + L1ME2 LINE L1 5529 6162 -2 1025 290 37 23 chr2 126673642 126674077 -124013777 + L1ME3A LINE L1 5716 6156 -14 750 296 79 60 chr2 126674165 126675160 -124012694 + L1M4 LINE L1 3794 4807 -1339 35 0 0 0 chr2 126675452 126675487 -124012367 + AT_rich Low_complexity Low_complexity 1 35 0 4370 226 80 30 chr2 126675514 126676646 -124011208 - ERVL LTR ERVL -1904 3860 2673 1138 261 37 3 chr2 126678116 126678491 -124009363 - Charlie2 DNA MER1_type -1 2861 2474 2594 190 13 4 chr2 126678583 126679051 -124008803 - MER70B LTR ERVL -102 476 5 3804 5 2 0 chr2 126681349 126681780 -124006074 + L1PA2 LINE L1 5724 6155 0 220 217 21 25 chr2 126681860 126681964 -124005890 - MIR SINE MIR -66 142 40 309 294 118 44 chr2 126682789 126682972 -124004882 + MIR SINE MIR 57 251 -11 21 57 0 0 chr2 126682976 126683011 -124004843 + AT_rich Low_complexity Low_complexity 1 35 0 220 293 35 52 chr2 126683194 126683310 -124004544 + MIR SINE MIR 65 178 -84 800 229 27 5 chr2 126683558 126683746 -124004108 + MER20 DNA MER1_type 28 219 0 1970 224 51 35 chr2 126683835 126684182 -124003672 + MLT2B3 LTR ERVL 1 341 -213 2111 155 14 22 chr2 126684182 126684549 -124003305 + THE1B LTR MaLR 1 364 0 11648 98 4 1 chr2 126684549 126686124 -124001730 + THE1B-int LTR MaLR 1 1579 -1 2323 131 8 16 chr2 126686124 126686491 -124001363 + THE1B LTR MaLR 1 364 0 1970 224 51 35 chr2 126686491 126686631 -124001223 + MLT2B3 LTR ERVL 340 498 -56 207 204 0 0 chr2 126686633 126686682 -124001172 + (TA)n Simple_repeat Simple_repeat 2 50 0 1046 204 61 7 chr2 126686685 126686964 -124000890 + Tigger2a DNA MER2_type 25 318 -116 4470 125 24 93 chr2 126686964 126688442 -123999412 - pTR5 LTR ERV1 0 2606 1524 396 262 103 0 chr2 126688448 126688555 -123999299 + Tigger2a DNA MER2_type 325 442 -2 338 82 0 20 chr2 126688555 126688603 -123999251 + MLT2B3 LTR ERVL 469 515 0 426 286 16 37 chr2 126688880 126689069 -123998785 + MLT1I LTR MaLR 52 236 -173 3988 238 45 28 chr2 126689535 126690856 -123996998 - L1MD1 LINE L1 -15 6487 5122 524 164 57 0 chr2 126690856 126690978 -123996876 + L1MB7 LINE L1 6048 6176 -8 3988 238 45 28 chr2 126690978 126691343 -123996511 - L1MD1 LINE L1 -1380 5122 4765 233 53 53 0 chr2 126691343 126691381 -123996473 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2377 111 8 0 chr2 126691385 126691738 -123996116 - L1PB1 LINE L1 -1 6150 5795 206 152 0 22 chr2 126691777 126691823 -123996031 + (TA)n Simple_repeat Simple_repeat 1 45 0 6287 179 13 21 chr2 126691823 126693788 -123994066 - L1PB1 LINE L1 -360 5791 3843 319 276 47 16 chr2 126693767 126693959 -123993895 - L1MD1 LINE L1 -1628 4518 4321 * 1394 282 21 0 chr2 126693957 126694294 -123993560 - L1MD1 LINE L1 -6054 355 12 1533 206 11 7 chr2 126695805 126696092 -123991762 + AluJo SINE Alu 1 288 -24 301 300 12 12 chr2 126696540 126696620 -123991234 - MIR3 SINE MIR -44 164 85 841 187 19 59 chr2 126696903 126697121 -123990733 - MER20 DNA MER1_type -2 217 14 269 364 31 0 chr2 126698154 126698283 -123989571 - MIR3 SINE MIR -7 201 69 1622 181 35 3 chr2 126698376 126698663 -123989191 + AluJo SINE Alu 1 296 -16 209 214 0 60 chr2 126698767 126698851 -123989003 + A-rich Low_complexity Low_complexity 1 79 0 21 110 0 0 chr2 126699427 126699518 -123988336 + AT_rich Low_complexity Low_complexity 1 91 0 5994 102 38 4 chr2 126699519 126700563 -123987291 - L1PB1 LINE L1 -6 6145 5069 537 240 7 7 chr2 126700548 126700698 -123987156 + L1PB1 LINE L1 4927 5076 -1070 * 5954 147 30 24 chr2 126700918 126703074 -123984780 - L1MA6 LINE L1 0 6300 4128 429 345 34 43 chr2 126703841 126704076 -123983778 - MIR SINE MIR -28 234 2 188 246 131 0 chr2 126704822 126704883 -123982971 - L2 LINE L2 -44 3228 3160 3544 209 19 43 chr2 126705217 126706203 -123981651 - L1MB4 LINE L1 0 6180 5219 538 144 51 42 chr2 126706203 126706321 -123981533 + LTR9B LTR ERV1 442 560 -84 1964 232 81 51 chr2 126706351 126706454 -123981400 - L1MB4 LINE L1 -917 5229 5130 198 0 0 0 chr2 126706454 126706476 -123981378 + (TTA)n Simple_repeat Simple_repeat 3 24 0 2119 20 0 0 chr2 126706476 126706720 -123981134 - L1PA4 LINE L1 -18 6137 5894 1964 232 81 51 chr2 126706720 126706902 -123980952 - L1MB4 LINE L1 -1016 5130 4955 2403 151 62 0 chr2 126706902 126707305 -123980549 - MSTA LTR MaLR 0 428 1 1964 232 81 51 chr2 126707305 126707837 -123980017 - L1MB4 LINE L1 -1191 4955 4386 7517 175 27 32 chr2 126707844 126708067 -123979787 - L1PA15 LINE L1 -8 7595 7373 1793 157 7 14 chr2 126708067 126708361 -123979493 - AluSg SINE Alu -18 292 1 7517 175 27 32 chr2 126708361 126708545 -123979309 - L1PA15 LINE L1 -230 7373 7190 2203 121 0 16 chr2 126708545 126708860 -123978994 - AluSx SINE Alu -2 310 1 7517 175 27 32 chr2 126708860 126710838 -123977016 - L1PA15 LINE L1 -413 7190 5221 1123 176 5 9 chr2 126710840 126711061 -123976793 - L1PA15 LINE L1 -4552 3029 2810 4230 191 22 10 chr2 126711103 126713496 -123974358 - L1MA1 LINE L1 0 7721 5360 1667 176 47 33 chr2 126713496 126713855 -123973999 - THE1B LTR MaLR 0 364 1 4230 191 22 10 chr2 126713855 126714438 -123973416 - L1MA1 LINE L1 -2361 5360 4548 7063 45 2 0 chr2 126714438 126715655 -123972199 - L1PA5 LINE L1 -6 6148 4922 4230 191 22 10 chr2 126715655 126715751 -123972103 - L1MA1 LINE L1 -3173 4548 4455 3832 144 52 13 chr2 126715740 126716492 -123971362 - L1MA1 LINE L1 -4108 3457 2677 * 2446 254 86 89 chr2 126716488 126718145 -123969709 - L1M4c LINE L1 -4702 1682 31 * 1334 199 76 4 chr2 126718749 126719031 -123968823 - AluJb SINE Alu 0 301 1 211 262 135 48 chr2 126719844 126719970 -123967884 - L2 LINE L2 -5 3308 3172 2355 170 91 10 chr2 126720260 126720777 -123967077 + L1MA4 LINE L1 5728 6286 -14 219 146 37 37 chr2 126721246 126721328 -123966526 + (TTA)n Simple_repeat Simple_repeat 3 84 0 345 305 125 25 chr2 126721415 126721793 -123966061 + L1MCc LINE L1 19 943 -5998 736 250 126 52 chr2 126722359 126723172 -123964682 + L1MCc LINE L1 1223 2077 -4864 1028 339 37 5 chr2 126723345 126723779 -123964075 + L1M2 LINE L1 1 448 -6401 1188 226 11 42 chr2 126724781 126725046 -123962808 + L1PA16 LINE L1 477 733 -6116 10487 243 31 46 chr2 126725536 126726326 -123961528 + L1PA16 LINE L1 1571 2371 -4498 218 81 27 0 chr2 126726326 126726363 -123961491 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 10487 243 31 46 chr2 126726363 126727017 -123960837 + L1PA16 LINE L1 2371 3033 -3836 2202 95 0 10 chr2 126727017 126727312 -123960542 + AluY SINE Alu 1 292 -19 10487 243 31 46 chr2 126727312 126731191 -123956663 + L1PA16 LINE L1 3033 6857 -12 1131 192 5 34 chr2 126731197 126731405 -123956449 + AluJo SINE Alu 7 208 -104 2201 227 77 32 chr2 126731406 126732174 -123955680 + L1MB8 LINE L1 4615 5417 -744 965 299 60 15 chr2 126732176 126732574 -123955280 - LTR52 LTR ERVL -5 416 1 1558 243 43 0 chr2 126732574 126732969 -123954885 + L1MB8 LINE L1 5419 5830 -354 975 241 27 22 chr2 126732992 126733216 -123954638 + MER8 DNA MER2_type 14 238 -1 1498 193 51 9 chr2 126733221 126733552 -123954302 + L1MB8 LINE L1 5831 6175 -3 606 247 50 5 chr2 126733553 126733772 -123954082 + L1ME1 LINE L1 4942 5170 -976 1806 233 75 20 chr2 126733787 126734374 -123953480 + L1ME1 LINE L1 5530 6148 -18 881 247 113 0 chr2 126734417 126734709 -123953145 + L1MD3 LINE L1 7671 7995 0 1608 220 70 39 chr2 126734825 126735285 -123952569 + MLT1D LTR MaLR 30 503 -2 329 67 0 0 chr2 126735356 126735401 -123952453 - MADE1 DNA Mariner -34 46 2 720 190 7 7 chr2 126735512 126735649 -123952205 + FRAM SINE Alu 1 137 -39 196 273 91 61 chr2 126736594 126736726 -123951128 + MIR SINE MIR 49 184 -78 23 33 0 0 chr2 126737450 126737480 -123950374 + AT_rich Low_complexity Low_complexity 1 30 0 1695 189 0 3 chr2 126738633 126738924 -123948930 - AluJb SINE Alu -22 290 1 2077 106 0 49 chr2 126739335 126739664 -123948190 - AluSp SINE Alu 0 313 1 223 358 0 11 chr2 126739666 126739761 -123948093 + MIR3 SINE MIR 97 190 -18 184 238 12 12 chr2 126739931 126740011 -123947843 + CT-rich Low_complexity Low_complexity 2 81 0 353 286 94 35 chr2 126741050 126741368 -123946486 - HAL1 LINE L1 -92 2415 2079 21 0 0 0 chr2 126741831 126741852 -123946002 + AT_rich Low_complexity Low_complexity 1 21 0 243 83 56 0 chr2 126741872 126741908 -123945946 - MIR SINE MIR -9 253 216 2445 53 30 0 chr2 126742478 126742779 -123945075 + AluY SINE Alu 1 310 -1 21 0 0 0 chr2 126743313 126743334 -123944520 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 126743707 126743730 -123944124 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr2 126744170 126744193 -123943661 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 339 293 0 0 chr2 126745305 126745404 -123942450 - L1M4 LINE L1 -1205 4941 4843 244 240 0 0 chr2 126745702 126745752 -123942102 + L2 LINE L2 3262 3311 -2 22 0 0 0 chr2 126746565 126746587 -123941267 + AT_rich Low_complexity Low_complexity 1 22 0 275 318 73 18 chr2 126746642 126746752 -123941102 + MIR SINE MIR 80 195 -67 559 318 112 0 chr2 126746804 126747100 -123940754 - LTR16A LTR ERVL -2 448 120 2230 102 3 0 chr2 126748625 126748920 -123938934 + AluSp SINE Alu 1 296 -17 24 0 0 0 chr2 126749401 126749425 -123938429 + AT_rich Low_complexity Low_complexity 1 24 0 337 139 12 12 chr2 126750724 126750810 -123937044 + (TA)n Simple_repeat Simple_repeat 2 87 0 1971 136 3 0 chr2 126750811 126751098 -123936756 - AluSx SINE Alu -24 288 1 322 361 90 7 chr2 126751307 126751451 -123936403 - LTR16C LTR ERVL -166 325 170 2141 129 0 0 chr2 126752240 126752534 -123935320 + AluSq SINE Alu 3 296 -17 245 186 14 0 chr2 126753128 126753198 -123934656 + (TG)n Simple_repeat Simple_repeat 1 71 0 22 70 0 0 chr2 126754025 126754068 -123933786 + AT_rich Low_complexity Low_complexity 1 43 0 10745 234 25 82 chr2 126754553 126755656 -123932198 + L1PA16 LINE L1 1361 2525 -4292 1795 169 4 0 chr2 126755656 126756095 -123931759 - AluSx SINE Alu 0 442 3 10745 234 25 82 chr2 126756095 126758808 -123929046 + L1PA16 LINE L1 2525 5150 -1667 1995 161 84 25 chr2 126758808 126759200 -123928654 - MSTA LTR MaLR -12 416 2 10745 234 25 82 chr2 126759200 126760779 -123927075 + L1PA16 LINE L1 5150 6817 0 978 210 42 25 chr2 126761131 126761369 -123926485 - MER39 LTR ERV1 -20 687 446 393 319 76 0 chr2 126761401 126761558 -123926296 - HAL1 LINE L1 -842 1665 1497 309 256 44 58 chr2 126761798 126761935 -123925919 + MIR SINE MIR 30 144 -64 21 0 0 0 chr2 126762107 126762128 -123925726 + AT_rich Low_complexity Low_complexity 1 21 0 202 143 0 24 chr2 126762249 126762291 -123925563 + (TAAAAA)n Simple_repeat Simple_repeat 4 44 0 955 227 99 0 chr2 126763380 126763622 -123924232 + LTR48B LTR ERV1 7 272 -372 293 243 140 0 chr2 126763615 126763722 -123924132 + LTR48B LTR ERV1 457 578 -66 * 188 250 0 58 chr2 126763876 126763928 -123923926 - L2 LINE L2 -9 3263 3215 * 270 261 124 92 chr2 126763917 126764070 -123923784 - MIR SINE MIR -29 233 76 25 31 0 0 chr2 126764660 126764692 -123923162 + AT_rich Low_complexity Low_complexity 1 32 0 346 333 27 27 chr2 126764843 126764990 -123922864 + MLT1F1 LTR MaLR 11 157 -385 1448 256 79 32 chr2 126764991 126765347 -123922507 - LTR26B LTR ERV1 0 531 142 2179 110 107 13 chr2 126765347 126765738 -123922116 + MSTA LTR MaLR 1 428 0 1448 256 79 32 chr2 126765738 126765888 -123921966 - LTR26B LTR ERV1 -389 142 1 944 234 102 21 chr2 126765920 126766247 -123921607 + MLT1F1 LTR MaLR 178 564 -3 300 259 148 66 chr2 126766991 126767193 -123920661 - MIR SINE MIR -48 214 4 23 0 0 0 chr2 126767542 126767565 -123920289 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr2 126767699 126767731 -123920123 + AT_rich Low_complexity Low_complexity 1 32 0 2470 64 3 0 chr2 126768595 126768892 -123918962 - AluY SINE Alu -13 298 1 254 29 29 0 chr2 126768970 126769005 -123918849 + (CA)n Simple_repeat Simple_repeat 1 36 0 25 31 0 0 chr2 126769249 126769281 -123918573 + AT_rich Low_complexity Low_complexity 1 32 0 198 0 0 0 chr2 126769656 126769678 -123918176 + (TCTG)n Simple_repeat Simple_repeat 1 22 0 313 326 94 22 chr2 126769932 126770070 -123917784 - L2 LINE L2 -1 3271 3124 210 378 76 17 chr2 126770301 126770473 -123917381 - L2 LINE L2 -566 2748 2567 386 311 116 20 chr2 126770644 126770895 -123916959 - L2 LINE L2 -874 2440 2166 2350 83 0 29 chr2 126771266 126771580 -123916274 + AluY SINE Alu 1 305 -6 352 319 31 38 chr2 126771605 126771765 -123916089 + MIR SINE MIR 54 212 -50 614 228 166 9 chr2 126772570 126772870 -123914984 - MER20B DNA MER1_type -192 591 198 231 218 18 18 chr2 126772923 126772978 -123914876 + MLT1J1 LTR MaLR 42 96 -350 731 333 106 14 chr2 126773047 126773491 -123914363 - LTR33 LTR ERVL 0 521 37 715 219 38 11 chr2 126773578 126773761 -123914093 + MER5A DNA MER1_type 2 189 0 326 336 19 66 chr2 126774149 126774360 -123913494 + L2 LINE L2 1427 1627 -1687 783 310 102 41 chr2 126774569 126775227 -123912627 + L2 LINE L2 1889 2586 -728 459 311 55 98 chr2 126775224 126775716 -123912138 + L2 LINE L2 2842 3312 -1 * 363 312 158 23 chr2 126776539 126776754 -123911100 - MIR SINE MIR 0 262 19 190 304 64 40 chr2 126778164 126778289 -123909565 - MIR SINE MIR -130 132 5 725 234 5 0 chr2 126779614 126779806 -123908048 + L1MA4 LINE L1 6106 6298 -2 271 408 70 0 chr2 126779967 126780124 -123907730 + MIR SINE MIR 8 175 -87 347 299 92 29 chr2 126780664 126780838 -123907016 - MER5A DNA MER1_type -3 186 2 227 371 7 36 chr2 126781099 126781239 -123906615 - MIR SINE MIR -108 154 19 188 356 103 40 chr2 126782648 126782822 -123905032 + MIR SINE MIR 12 196 -66 183 80 0 0 chr2 126782875 126782900 -123904954 + (TTA)n Simple_repeat Simple_repeat 2 26 0 264 255 88 59 chr2 126783684 126783786 -123904068 + L2 LINE L2 3208 3312 -1 1586 185 7 0 chr2 126784114 126784400 -123903454 + AluJo SINE Alu 3 290 -22 254 66 79 13 chr2 126784467 126784543 -123903311 + (CATAA)n Simple_repeat Simple_repeat 4 84 0 185 117 67 0 chr2 126785123 126785183 -123902671 + (CATAA)n Simple_repeat Simple_repeat 1 64 0 195 114 0 0 chr2 126785843 126785878 -123901976 + (CATA)n Simple_repeat Simple_repeat 2 36 0 256 159 16 16 chr2 126786534 126786597 -123901257 + GA-rich Low_complexity Low_complexity 1 63 0 253 236 49 81 chr2 126787602 126787725 -123900129 + L2 LINE L2 3140 3258 -55 218 189 0 0 chr2 126788804 126788841 -123899013 + (CTTTG)n Simple_repeat Simple_repeat 3 39 0 427 128 18 101 chr2 126788960 126789069 -123898785 + Tigger4(Zombi) DNA MER2_type 2632 2731 0 228 200 0 0 chr2 126789071 126789126 -123898728 + (TG)n Simple_repeat Simple_repeat 2 56 0 302 322 14 34 chr2 126789627 126789773 -123898081 + MIR SINE MIR 5 147 -115 570 266 131 45 chr2 126789804 126790116 -123897738 - L2 LINE L2 -2 3311 2973 232 347 60 30 chr2 126790415 126790582 -123897272 + MIR SINE MIR 28 199 -63 204 326 105 0 chr2 126792071 126792166 -123895688 - MIR3 SINE MIR -37 171 67 25 31 0 0 chr2 126792336 126792368 -123895486 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr2 126792619 126792646 -123895208 + AT_rich Low_complexity Low_complexity 1 27 0 187 250 118 40 chr2 126792653 126792729 -123895125 + L2 LINE L2 2528 2609 -705 426 231 70 35 chr2 126792827 126792970 -123894884 + MER103 DNA DNA 12 159 -7 2103 125 3 7 chr2 126793385 126793689 -123894165 - AluSg SINE Alu -7 303 1 26 50 0 0 chr2 126794762 126794802 -123893052 + AT_rich Low_complexity Low_complexity 1 40 0 357 120 0 0 chr2 126795127 126795177 -123892677 + THE1C LTR MaLR 1 50 -325 1816 157 7 0 chr2 126795177 126795458 -123892396 - MLT2A2 LTR ERVL -165 288 6 209 275 0 0 chr2 126795460 126795500 -123892354 + L2 LINE L2 3252 3291 -22 354 80 0 0 chr2 126795547 126795597 -123892257 + (TC)n Simple_repeat Simple_repeat 2 51 0 1934 184 8 8 chr2 126795614 126795968 -123891886 - MER47A DNA MER2_type 0 366 13 211 120 20 40 chr2 126796019 126796069 -123891785 + (CATA)n Simple_repeat Simple_repeat 4 52 0 236 288 0 25 chr2 126796097 126796177 -123891677 + (CATATA)n Simple_repeat Simple_repeat 3 80 0 2194 198 56 109 chr2 126797173 126797937 -123889917 - LTR8A LTR ERV1 0 727 4 384 191 168 35 chr2 126798423 126798596 -123889258 - MER69 DNA AcHobo -10 2516 2321 443 318 144 10 chr2 126798643 126798844 -123889010 - MER69 DNA AcHobo -2296 230 3 2326 61 0 17 chr2 126799515 126799850 -123888004 + AluY SINE Alu 1 330 0 216 271 43 0 chr2 126799988 126800058 -123887796 - L2 LINE L2 -4 3309 3237 206 273 0 23 chr2 126800164 126800208 -123887646 - L2 LINE L2 -205 3067 3025 3113 72 5 5 chr2 126800316 126800747 -123887107 + L1PA8 LINE L1 5742 6172 0 450 328 68 43 chr2 126800824 126801147 -123886707 - L2 LINE L2 -679 2635 2305 1425 247 60 6 chr2 126801152 126801679 -123886175 + MER82 DNA MER2_type 1 653 0 781 284 74 60 chr2 126801679 126802245 -123885609 - L2 LINE L2 -1029 2285 1712 516 260 67 0 chr2 126802312 126802462 -123885392 - MER110 LTR ERV1 -20 471 312 988 271 20 17 chr2 126802540 126802846 -123885008 + MLT1E LTR MaLR 356 593 0 257 254 191 0 chr2 126802846 126802972 -123884882 + L1M4 LINE L1 3629 3778 -2368 660 282 59 49 chr2 126803100 126803590 -123884264 + L1M4 LINE L1 4085 4579 -1567 231 36 0 0 chr2 126804761 126804789 -123883065 + (CA)n Simple_repeat Simple_repeat 2 29 0 330 26 0 0 chr2 126805161 126805200 -123882654 + (CA)n Simple_repeat Simple_repeat 2 40 0 237 253 11 88 chr2 126805517 126805608 -123882246 - L1M4 LINE L1 -1988 4158 4075 368 333 80 35 chr2 126806612 126806749 -123881105 - L1M4 LINE L1 -3102 3044 2915 1454 192 6 32 chr2 126806749 126807062 -123880792 - AluJo SINE Alu -7 305 1 368 333 80 35 chr2 126807062 126807348 -123880506 - L1M4 LINE L1 -3231 2915 2602 6898 200 13 29 chr2 126807467 126809820 -123878034 - L1PB4 LINE L1 -121 6035 3715 226 305 31 55 chr2 126811457 126811585 -123876269 - MIR SINE MIR -73 189 65 1284 188 18 0 chr2 126811821 126812039 -123875815 + MER2 DNA MER2_type 1 222 -123 1024 176 14 72 chr2 126812039 126812232 -123875622 + AluJb SINE Alu 80 283 -29 2482 131 0 18 chr2 126812232 126812614 -123875240 + THE1C LTR MaLR 1 375 0 9330 141 16 28 chr2 126812614 126814213 -123873641 + THE1C-int LTR MaLR 1 1579 -1 2496 111 5 41 chr2 126814214 126814550 -123873304 + THE1C LTR MaLR 1 323 -52 1915 99 0 0 chr2 126814550 126814802 -123873052 + AluY SINE Alu 47 298 -13 2496 111 5 41 chr2 126814802 126814854 -123873000 + THE1C LTR MaLR 323 375 0 1024 176 14 72 chr2 126814854 126814879 -123872975 + AluJb SINE Alu 281 288 -24 1848 146 28 0 chr2 126814923 126815210 -123872644 + AluSg SINE Alu 5 299 -11 245 291 0 0 chr2 126815262 126815317 -123872537 + MER2 DNA MER2_type 291 345 0 1756 168 8 5 chr2 126815871 126816236 -123871618 - Tigger4(Zombi) DNA MER2_type 0 2731 1 22 35 0 0 chr2 126816334 126816363 -123871491 + AT_rich Low_complexity Low_complexity 1 29 0 810 242 83 4 chr2 126816765 126817043 -123870811 - MER33 DNA MER1_type -32 292 1 189 0 0 0 chr2 126818182 126818203 -123869651 + (A)n Simple_repeat Simple_repeat 1 21 0 239 337 125 0 chr2 126818273 126818457 -123869397 + MIR3 SINE MIR 1 207 -1 486 200 270 4 chr2 126819171 126819318 -123868536 - MER33 DNA MER1_type -2263 361 254 180 77 0 0 chr2 126819318 126819344 -123868510 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 486 200 270 4 chr2 126819344 126819433 -123868421 - MER33 DNA MER1_type -2370 254 26 390 295 41 0 chr2 126820150 126820272 -123867582 + L2 LINE L2 3187 3313 0 21 0 0 0 chr2 126821483 126821504 -123866350 + AT_rich Low_complexity Low_complexity 1 21 0 44 63 0 0 chr2 126822796 126822875 -123864979 + AT_rich Low_complexity Low_complexity 1 79 0 648 214 0 8 chr2 126823008 126823134 -123864720 - FLAM_C SINE Alu -6 137 13 39 22 0 0 chr2 126823140 126823186 -123864668 + AT_rich Low_complexity Low_complexity 1 46 0 2047 134 48 28 chr2 126823355 126823712 -123864142 - THE1B LTR MaLR 0 364 1 1951 180 0 0 chr2 126824391 126824881 -123862973 - L1PB1 LINE L1 -713 5438 4949 4659 102 19 0 chr2 126824882 126825213 -123862641 + L1PB1 LINE L1 5450 5773 -424 246 62 0 0 chr2 126825213 126825245 -123862609 + (CA)n Simple_repeat Simple_repeat 2 33 0 4659 102 19 0 chr2 126825245 126825648 -123862206 + L1PB1 LINE L1 5773 6197 0 2722 155 48 24 chr2 126826170 126826750 -123861104 + L1MA8 LINE L1 5692 6285 -6 1366 235 97 19 chr2 126827151 126827666 -123860188 - Charlie2 DNA MER1_type -146 2716 2162 809 275 34 6 chr2 126827664 126827991 -123859863 - Charlie2b DNA MER1_type -1511 1271 936 * 1333 205 91 0 chr2 126828019 126828282 -123859572 - AluJo SINE Alu -25 287 1 818 310 33 73 chr2 126828284 126828710 -123859144 - Charlie2b DNA MER1_type -1842 940 532 1850 120 4 0 chr2 126828875 126829125 -123858729 - AluSq SINE Alu -62 251 1 559 295 71 51 chr2 126829127 126829734 -123858120 - L1M4 LINE L1 -1949 4197 3579 828 263 56 72 chr2 126829824 126830167 -123857687 - L1M4 LINE L1 -2791 3355 3008 468 185 25 17 chr2 126830167 126830286 -123857568 - L1MA4 LINE L1 0 6300 6181 828 263 56 72 chr2 126830286 126830321 -123857533 - L1M4 LINE L1 -3138 3008 2974 1916 132 35 3 chr2 126830321 126830609 -123857245 + AluSg SINE Alu 3 299 -11 828 263 56 72 chr2 126830609 126830895 -123856959 - L1M4 LINE L1 -3172 2974 2701 186 303 45 15 chr2 126831046 126831112 -123856742 - MER5A DNA MER1_type -87 102 35 1719 157 109 9 chr2 126831140 126831471 -123856383 + THE1B LTR MaLR 1 364 0 5783 115 27 6 chr2 126831471 126832331 -123855523 + THE1B-int LTR MaLR 1 878 -702 * 22974 100 24 7 chr2 126832319 126836920 -123850934 + L1PA7 LINE L1 1501 6143 -11 4893 120 3 3 chr2 126836948 126837672 -123850182 + THE1B-int LTR MaLR 857 1580 0 1880 161 51 20 chr2 126837672 126838025 -123849829 + THE1B LTR MaLR 1 364 0 236 303 90 0 chr2 126838590 126838679 -123849175 + LTR33 LTR ERVL 342 438 -83 227 283 131 14 chr2 126838772 126838917 -123848937 + L2 LINE L2 2747 2908 -406 336 272 58 10 chr2 126839860 126839963 -123847891 + MIR SINE MIR 53 160 -102 1115 189 56 8 chr2 126840171 126840420 -123847434 - MSTD LTR MaLR 0 396 136 4420 107 52 3 chr2 126840734 126841390 -123846464 + LTR12 LTR ERV1 1 688 0 2237 101 0 19 chr2 126842286 126842603 -123845251 - AluY SINE Alu 0 311 1 283 287 43 12 chr2 126843586 126843750 -123844104 + (TA)n Simple_repeat Simple_repeat 1 169 0 280 343 86 0 chr2 126843980 126844120 -123843734 + MIR SINE MIR 76 227 -35 237 340 47 0 chr2 126845039 126845145 -123842709 + L2 LINE L2 3203 3313 0 4170 244 90 16 chr2 126845195 126846072 -123841782 - L1ME1 LINE L1 -6 6396 5585 2017 178 73 20 chr2 126846072 126846510 -123841344 - LOR1b LTR ERV1 0 461 1 4170 244 90 16 chr2 126846510 126847822 -123840032 - L1ME1 LINE L1 -817 5585 4054 272 142 0 13 chr2 126847851 126847914 -123839940 - L1MA6 LINE L1 -2 6298 6230 704 146 9 9 chr2 126848064 126848174 -123839680 + FLAM_C SINE Alu 14 123 -20 26 64 0 0 chr2 126848201 126848248 -123839606 + AT_rich Low_complexity Low_complexity 1 47 0 371 282 58 0 chr2 126848566 126848669 -123839185 - L2 LINE L2 -7 3265 3157 391 244 53 38 chr2 126849302 126849433 -123838421 - L2 LINE L2 -1 3312 3180 2150 95 18 0 chr2 126849657 126849940 -123837914 + AluSp SINE Alu 1 288 -25 228 286 57 19 chr2 126852620 126852725 -123835129 - MER5C DNA MER1_type -200 124 16 3328 139 16 13 chr2 126852729 126853282 -123834572 + LTR38 LTR ERV1 1 555 -1 279 0 0 0 chr2 126853699 126853730 -123834124 + (CA)n Simple_repeat Simple_repeat 2 32 0 216 67 0 0 chr2 126854181 126854211 -123833643 + (CA)n Simple_repeat Simple_repeat 2 31 0 1003 225 43 88 chr2 126855035 126855830 -123832024 - L1ME1 LINE L1 -3574 2808 2044 320 262 58 0 chr2 126855830 126855933 -123831921 - MER82 DNA MER2_type -4 649 541 390 21 0 0 chr2 126856097 126856144 -123831710 + (TA)n Simple_repeat Simple_repeat 2 48 0 180 292 45 56 chr2 126856425 126856514 -123831340 + MIR SINE MIR 44 131 -131 200 300 0 0 chr2 126856624 126856674 -123831180 + L2 LINE L2 3213 3262 -10 1149 208 104 19 chr2 126857229 126857547 -123830307 + MLT1A1 LTR MaLR 1 345 -20 228 238 83 0 chr2 126857814 126857898 -123829956 + L1ME4a LINE L1 5795 5885 -236 1278 161 0 33 chr2 126857916 126858127 -123829727 - AluJo SINE Alu -24 288 85 244 175 53 0 chr2 126858275 126858332 -123829522 + L1ME4a LINE L1 6060 6119 -2 414 0 0 0 chr2 126858386 126858432 -123829422 + (TA)n Simple_repeat Simple_repeat 1 46 0 2177 148 83 16 chr2 126861383 126861817 -123826037 + MLT1C LTR MaLR 5 467 0 2364 94 0 0 chr2 126861820 126862127 -123825727 + AluY SINE Alu 1 307 -4 466 211 67 10 chr2 126863553 126863657 -123824197 - L2 LINE L2 0 3313 3204 2300 104 0 3 chr2 126863980 126864287 -123823567 - AluSx SINE Alu -6 306 1 1009 175 48 66 chr2 126864287 126864802 -123823052 - L1M4 LINE L1 -589 5585 5001 718 260 93 39 chr2 126864916 126865323 -123822531 - LTR1B LTR ERV1 -354 472 44 1851 149 44 54 chr2 126865368 126865758 -123822096 + MLT1B LTR MaLR 3 388 -2 4480 136 23 20 chr2 126865771 126866566 -123821288 - L1MC1 LINE L1 0 6333 5537 800 205 6 0 chr2 126867476 126867637 -123820217 - MER58B DNA MER1_type -11 330 169 199 250 0 109 chr2 126868953 126869045 -123818809 + MIR3 SINE MIR 126 207 -1 201 154 0 0 chr2 126869484 126869523 -123818331 + (CA)n Simple_repeat Simple_repeat 2 40 0 341 207 107 16 chr2 126871824 126871945 -123815909 - MLT1C LTR MaLR -5 462 229 211 267 64 99 chr2 126872759 126872931 -123814923 + MIR3 SINE MIR 28 193 -15 194 178 44 22 chr2 126873045 126873090 -123814764 + L2 LINE L2 3216 3261 -11 312 324 20 29 chr2 126874152 126874254 -123813600 - L2 LINE L2 -22 3250 3150 684 254 132 18 chr2 126875124 126875344 -123812510 + MIR SINE MIR 15 259 -3 204 250 0 50 chr2 126875773 126875833 -123812021 - MIR SINE MIR -92 170 114 185 276 219 41 chr2 126875800 126875923 -123811931 - MIR3 SINE MIR -61 147 3 * 522 167 61 44 chr2 126877395 126877509 -123810345 + MER46A DNA MER2_type 3 118 -118 27 29 0 0 chr2 126877614 126877648 -123810206 + AT_rich Low_complexity Low_complexity 1 34 0 2303 83 0 10 chr2 126878291 126878592 -123809262 - AluSq SINE Alu -15 298 1 374 121 0 15 chr2 126879144 126879210 -123808644 + L1PA7 LINE L1 6083 6147 -7 1737 158 13 23 chr2 126879903 126880206 -123807648 - AluJo SINE Alu -12 300 1 2206 123 0 0 chr2 126880272 126880572 -123807282 - AluY SINE Alu -11 300 1 694 164 18 0 chr2 126880703 126880813 -123807041 - FLAM_A SINE Alu -30 112 1 21 0 0 0 chr2 126882481 126882502 -123805352 + AT_rich Low_complexity Low_complexity 1 21 0 42 0 0 0 chr2 126884996 126885038 -123802816 + AT_rich Low_complexity Low_complexity 1 42 0 2399 61 7 3 chr2 126885063 126885356 -123802498 + AluY SINE Alu 1 294 -17 1496 107 9 5 chr2 126885356 126885572 -123802282 + AluSg/x SINE Alu 79 295 -17 1795 136 30 0 chr2 126886284 126886586 -123801268 + L1MA5A LINE L1 5979 6289 -8 417 242 37 57 chr2 126887108 126887352 -123800502 - MER34B LTR ERV1 -5 560 322 10167 104 12 9 chr2 126887741 126889257 -123798597 + HERVL LTR ERVL 3706 5225 -429 309 51 0 0 chr2 126889660 126889699 -123798155 + (TA)n Simple_repeat Simple_repeat 2 40 0 374 169 0 0 chr2 126889711 126889776 -123798078 - MER82 DNA MER2_type -145 508 444 332 353 41 12 chr2 126889808 126889978 -123797876 + MIR SINE MIR 2 176 -86 402 214 12 0 chr2 126890038 126890122 -123797732 - MER82 DNA MER2_type -567 86 2 1490 213 109 7 chr2 126890142 126890556 -123797298 - MLT2C2 LTR ERVL -6 458 3 4750 238 73 26 chr2 126890585 126891630 -123796224 - L1M4c LINE L1 -4489 2157 1162 216 0 0 0 chr2 126891630 126891654 -123796200 + (TTG)n Simple_repeat Simple_repeat 1 24 0 4750 238 73 26 chr2 126891654 126892631 -123795223 - L1M4c LINE L1 -5484 1162 53 282 371 95 23 chr2 126893009 126893230 -123794624 + L2 LINE L2 2836 3072 -200 192 77 0 0 chr2 126893362 126893388 -123794466 + (TA)n Simple_repeat Simple_repeat 1 26 0 258 176 82 47 chr2 126893434 126893519 -123794335 + L1MC4 LINE L1 6616 6703 -1339 309 177 0 0 chr2 126893519 126893571 -123794283 + (TA)n Simple_repeat Simple_repeat 2 56 -7 225 0 0 0 chr2 126893571 126893596 -123794258 + (CA)n Simple_repeat Simple_repeat 2 26 0 309 177 0 0 chr2 126893596 126893605 -123794249 + (TA)n Simple_repeat Simple_repeat 55 63 0 211 322 76 100 chr2 126894625 126894914 -123792940 + L2 LINE L2 2950 3231 -41 282 169 0 15 chr2 126896076 126896141 -123791713 - MER4-int LTR ERV1 -5422 1176 1113 198 143 0 0 chr2 126896141 126896176 -123791678 + (TA)n Simple_repeat Simple_repeat 1 35 0 283 311 19 9 chr2 126896196 126896302 -123791552 + (TATATG)n Simple_repeat Simple_repeat 5 111 0 807 210 14 0 chr2 126896803 126896946 -123790908 + FRAM SINE Alu 1 142 -34 515 211 73 22 chr2 126897599 126897831 -123790023 + HERVL-A2 LTR ERVL 4974 5217 -437 2079 166 13 42 chr2 126897895 126898348 -123789506 + HERVL-A2 LTR ERVL 5215 5654 0 1994 162 19 73 chr2 126898348 126898913 -123788941 + MLT2A2 LTR ERVL 1 538 -16 928 133 0 0 chr2 126899341 126899499 -123788355 - L1MA4A LINE L1 -56 6247 6090 4255 130 21 4 chr2 126902630 126903306 -123784548 - LTR12 LTR ERV1 -1 687 1 228 293 49 65 chr2 126903677 126903800 -123784054 + L2 LINE L2 2698 2818 -496 407 341 130 18 chr2 126903836 126904112 -123783742 + L2 LINE L2 3005 3311 -2 1964 135 76 0 chr2 126904359 126904648 -123783206 + AluSx SINE Alu 1 311 -1 233 302 128 0 chr2 126904926 126905012 -123782842 - MIR SINE MIR -57 151 55 240 175 0 32 chr2 126905330 126905393 -123782461 + (TA)n Simple_repeat Simple_repeat 1 61 0 40 59 0 0 chr2 126905452 126905520 -123782334 + AT_rich Low_complexity Low_complexity 1 68 0 358 328 58 17 chr2 126905626 126905800 -123782054 + MIR SINE MIR 43 223 -39 255 61 0 0 chr2 126906048 126906081 -123781773 + (TG)n Simple_repeat Simple_repeat 2 34 0 285 275 50 0 chr2 126907722 126907802 -123780052 - MIR SINE MIR -67 141 58 1801 172 130 8 chr2 126909160 126909544 -123778310 + Tigger2a DNA MER2_type 1 431 -3 245 299 0 65 chr2 126909679 126909786 -123778068 + MIR SINE MIR 111 210 -52 187 255 0 20 chr2 126910191 126910242 -123777612 + MER5B DNA MER1_type 1 50 -128 4763 154 46 14 chr2 126911099 126912035 -123775819 + Tigger1 DNA MER2_type 2 967 -1451 13331 205 36 15 chr2 126912053 126912234 -123775620 - L1PB1 LINE L1 -8 6859 6683 2449 87 0 7 chr2 126912234 126912543 -123775311 - AluY SINE Alu 0 311 5 13331 205 36 15 chr2 126912543 126918930 -123768924 - L1PB1 LINE L1 -184 6683 6 8179 147 10 14 chr2 126918950 126920413 -123767441 + Tigger1 DNA MER2_type 962 2418 0 201 74 0 0 chr2 126920854 126920881 -123766973 + (CA)n Simple_repeat Simple_repeat 2 28 0 182 91 30 0 chr2 126920979 126921012 -123766842 + (CA)n Simple_repeat Simple_repeat 1 34 0 269 316 44 26 chr2 126921018 126921132 -123766722 - MIR SINE MIR -138 124 9 1274 301 98 0 chr2 126921132 126921663 -123766191 + MER119 DNA MER1_type 1 583 0 2644 259 47 45 chr2 126922808 126923741 -123764113 + L1MD1 LINE L1 1 935 -5605 570 263 51 17 chr2 126923863 126924038 -123763816 + L1MD1 LINE L1 949 1129 -5411 1486 206 55 57 chr2 126924042 126924536 -123763318 - MLT1D LTR MaLR 0 505 13 380 194 0 0 chr2 126925018 126925085 -123762769 + L1MD1 LINE L1 2246 2312 -4228 207 130 37 37 chr2 126925107 126925161 -123762693 + (TA)n Simple_repeat Simple_repeat 1 54 0 3030 158 81 7 chr2 126925167 126925776 -123762078 + Tigger2 DNA MER2_type 10 663 -2055 * 9625 154 49 30 chr2 126925760 126927163 -123760691 + Tigger2 DNA MER2_type 778 2228 -490 2119 113 0 10 chr2 126927163 126927465 -123760389 + AluSc SINE Alu 1 299 -10 9625 154 49 30 chr2 126927465 126927966 -123759888 + Tigger2 DNA MER2_type 2228 2718 0 808 144 55 65 chr2 126927973 126928264 -123759590 + L1MD1 LINE L1 2323 2610 -3930 4587 250 66 40 chr2 126928343 126931254 -123756600 + L1MD1 LINE L1 2877 5710 -1043 210 71 0 0 chr2 126931254 126931282 -123756572 + (TA)n Simple_repeat Simple_repeat 1 28 0 4587 250 66 40 chr2 126931282 126931383 -123756471 + L1MD1 LINE L1 5710 5807 -946 180 0 0 0 chr2 126931383 126931403 -123756451 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 4587 250 66 40 chr2 126931403 126932078 -123755776 + L1MD1 LINE L1 5807 6753 0 233 170 21 0 chr2 126933838 126933885 -123753969 + (TAA)n Simple_repeat Simple_repeat 2 49 0 257 296 25 89 chr2 126935966 126936169 -123751685 - L2 LINE L2 -5 3308 3119 1458 275 104 57 chr2 126937839 126939976 -123747878 - L1MC5 LINE L1 -53 7908 5627 2432 47 3 3 chr2 126939976 126940272 -123747582 - AluY SINE Alu -15 296 1 1458 275 104 57 chr2 126940272 126940662 -123747192 - L1MC5 LINE L1 -2334 5627 5257 962 223 0 44 chr2 126941333 126941562 -123746292 - AluJo SINE Alu -93 219 1 185 310 0 17 chr2 126943200 126943258 -123744596 + MIR SINE MIR 95 151 -57 * 544 291 73 75 chr2 126943251 126943622 -123744232 + L2 LINE L2 2944 3313 0 315 0 0 0 chr2 126943794 126943829 -123744025 + (TG)n Simple_repeat Simple_repeat 2 36 0 354 278 9 0 chr2 126943831 126943938 -123743916 + L1MC4 LINE L1 6614 6702 -1340 2177 108 0 24 chr2 126943938 126944235 -123743619 - AluSq SINE Alu -22 291 2 354 375 58 21 chr2 126944330 126944570 -123743284 - L2 LINE L2 -167 3105 2857 186 341 0 0 chr2 126944614 126944658 -123743196 + L2 LINE L2 3211 3254 -18 439 305 85 27 chr2 126944905 126945236 -123742618 - LTR33A LTR ERVL -151 372 23 22 35 0 0 chr2 126945679 126945708 -123742146 + AT_rich Low_complexity Low_complexity 1 29 0 363 292 17 25 chr2 126946800 126946920 -123740934 + MIR SINE MIR 17 135 -127 1196 217 43 77 chr2 126948613 126949079 -123738775 + LTR7 LTR ERV1 1 450 0 544 283 193 0 chr2 126950310 126950522 -123737332 + MIR SINE MIR 10 262 0 221 327 78 46 chr2 126952280 126952433 -123735421 + L2 LINE L2 3115 3272 0 448 201 30 196 chr2 126952509 126952713 -123735141 - MER5A DNA MER1_type 0 178 16 203 254 0 95 chr2 126952739 126952802 -123735052 + MER5B DNA MER1_type 89 145 -33 304 423 83 15 chr2 126952883 126953278 -123734576 - L2 LINE L2 -21 3251 2830 1945 159 102 3 chr2 126953413 126953797 -123734057 + L1PA16 LINE L1 5736 6157 -9 2205 111 0 7 chr2 126954231 126954528 -123733326 - AluSg SINE Alu -15 295 1 311 281 0 21 chr2 126954619 126954715 -123733139 + L1MC4 LINE L1 6605 6698 -1344 231 246 15 15 chr2 126954715 126954780 -123733074 + (TATATG)n Simple_repeat Simple_repeat 5 69 0 198 237 0 0 chr2 126955908 126955946 -123731908 + L2 LINE L2 3258 3295 -18 2278 160 8 12 chr2 126956041 126956442 -123731412 + MER57A LTR ERV1 1 399 -4 2406 73 7 0 chr2 126957647 126957947 -123729907 + AluY SINE Alu 1 302 -9 301 272 44 7 chr2 126958159 126958295 -123729559 - Charlie7 DNA MER1_type -1892 720 580 2441 198 168 98 chr2 126958533 126959487 -123728367 + LTR28 LTR ERV1 1 1020 0 738 220 56 77 chr2 126959739 126960204 -123727650 + MLT1C LTR MaLR 1 466 -1 329 304 58 29 chr2 126960458 126960629 -123727225 - MIR SINE MIR -65 197 22 181 261 0 144 chr2 126962620 126962731 -123725123 + L2 LINE L2 3168 3262 -10 312 309 24 32 chr2 126962838 126962964 -123724890 + MIR SINE MIR 24 148 -114 491 304 165 9 chr2 126963022 126963246 -123724608 + MIR SINE MIR 2 260 -2 2245 102 0 0 chr2 126964716 126965011 -123722843 + AluSg SINE Alu 1 295 -15 3941 107 63 98 chr2 126965011 126965824 -123722030 + LTR1 LTR ERV1 2 785 0 440 329 43 28 chr2 126966014 126966269 -123721585 + MIR SINE MIR 3 261 -1 385 264 57 0 chr2 126966404 126966510 -123721344 - MER81 DNA DNA 0 114 3 1732 96 156 206 chr2 126966601 126967430 -123720424 + LTR12 LTR ERV1 1 2427 -11 294 258 34 0 chr2 126969107 126969196 -123718658 - MLT1K LTR MaLR 0 588 497 224 262 49 0 chr2 126969637 126969698 -123718156 + MIR SINE MIR 86 149 -113 1748 209 8 16 chr2 126969835 126970203 -123717651 - MLT1A1 LTR MaLR 0 365 1 233 29 0 29 chr2 126970557 126970592 -123717262 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 208 159 0 23 chr2 126970975 126971019 -123716835 + A-rich Low_complexity Low_complexity 2 44 0 2318 144 27 29 chr2 126971032 126971475 -123716379 + LTR56 LTR ERV1 4 445 0 216 385 36 10 chr2 126971909 126972104 -123715750 - L2 LINE L2 -927 2387 2188 480 282 0 0 chr2 126972499 126972655 -123715199 + (TA)n Simple_repeat Simple_repeat 1 156 0 302 294 0 22 chr2 126972660 126972752 -123715102 + L1MC4 LINE L1 6614 6703 -1339 * 309 326 0 0 chr2 126972697 126972786 -123715068 - L1MC4 LINE L1 -1340 6702 6614 210 213 21 0 chr2 126972787 126972834 -123715020 + (TA)n Simple_repeat Simple_repeat 1 48 0 759 230 212 15 chr2 126972888 126972937 -123714917 - LTR54B LTR ERV1 0 510 472 2110 149 25 6 chr2 126972937 126973292 -123714562 - THE1B LTR MaLR -2 362 1 759 230 212 15 chr2 126973292 126973663 -123714191 - LTR54B LTR ERV1 -38 472 3 7372 229 47 47 chr2 126973789 126977054 -123710800 + L1MA9 LINE L1 16 3280 -3048 789 181 36 60 chr2 126977054 126977220 -123710634 + AluJo SINE Alu 8 169 -143 7372 229 47 47 chr2 126977220 126977325 -123710529 + L1MA9 LINE L1 3280 3384 -2944 2231 63 0 30 chr2 126977325 126977624 -123710230 + AluY SINE Alu 1 290 -21 7372 229 47 47 chr2 126977624 126979524 -123708330 + L1MA9 LINE L1 3384 5337 -991 1377 254 24 29 chr2 126979519 126979972 -123707882 + L1MA9 LINE L1 6000 6450 -44 * 987 290 138 25 chr2 126979983 126980794 -123707060 + L1M4 LINE L1 3195 4097 -2049 188 346 58 37 chr2 126981140 126981328 -123706526 - L2 LINE L2 -2553 761 570 1176 152 37 5 chr2 126981380 126981597 -123706257 - L1PB1 LINE L1 -3 6148 5925 597 270 40 74 chr2 126981601 126981717 -123706137 - L1MC4a LINE L1 -1639 6169 6051 1701 195 3 10 chr2 126981717 126982030 -123705824 - AluJb SINE Alu -1 311 1 597 270 40 74 chr2 126982030 126982413 -123705441 - L1MC4a LINE L1 -1757 6051 5687 252 0 0 0 chr2 126983906 126983934 -123703920 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 506 323 62 67 chr2 126984790 126985131 -123702723 - L2 LINE L2 -14 3258 2920 576 336 190 22 chr2 126985873 126986282 -123701572 - L2 LINE L2 -626 2688 2349 1546 227 63 0 chr2 126986282 126986647 -123701207 - MLT1B LTR MaLR 0 390 3 576 336 190 22 chr2 126986647 126986885 -123700969 - L2 LINE L2 -965 2349 1932 189 230 149 68 chr2 126986880 126986954 -123700900 + L2 LINE L2 3171 3250 -22 * 2238 109 3 0 chr2 126987859 126988152 -123699702 - AluSx SINE Alu -18 294 1 369 345 55 0 chr2 126988164 126988329 -123699525 - MIR SINE MIR -18 244 71 496 214 60 83 chr2 126988342 126988510 -123699344 - MER63A DNA MER1_type -2 208 45 22 0 0 0 chr2 126988510 126988532 -123699322 + AT_rich Low_complexity Low_complexity 1 22 0 228 214 0 0 chr2 126988534 126988576 -123699278 - MER63A DNA MER1_type -158 52 11 479 335 31 0 chr2 126989014 126989175 -123698679 - MIR SINE MIR -2 260 95 226 211 11 21 chr2 126989490 126989585 -123698269 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 3305 23 0 0 chr2 126990054 126990442 -123697412 - L1P LINE L1 -1076 5070 4683 * 4301 0 0 0 chr2 126990439 126990915 -123696939 + L1HS LINE L1 5680 6155 0 26 0 0 0 chr2 126990971 126990997 -123696857 + AT_rich Low_complexity Low_complexity 1 26 0 1937 116 3 69 chr2 126991443 126991761 -123696093 - AluSx SINE Alu -15 297 1 212 359 0 22 chr2 126991785 126991966 -123695888 + CT-rich Low_complexity Low_complexity 2 178 0 225 39 0 0 chr2 126992946 126992972 -123694882 - MLT2D LTR ERVL 0 414 389 2452 206 15 6 chr2 126993036 126993512 -123694342 - MLT2B1 LTR ERVL -40 480 1 476 291 41 15 chr2 126995189 126995385 -123692469 + L1ME LINE L1 5546 5746 -375 1751 144 57 30 chr2 126995397 126995696 -123692158 - AluJb SINE Alu -5 307 1 551 316 22 42 chr2 126995987 126996300 -123691554 + MLT1I LTR MaLR 70 376 -33 29 60 0 0 chr2 126996341 126996391 -123691463 + AT_rich Low_complexity Low_complexity 1 50 0 3418 268 85 53 chr2 126996627 126998564 -123689290 - L1MC4a LINE L1 -310 7498 5499 2063 55 0 19 chr2 126998715 126998972 -123688882 - AluY SINE Alu -59 252 1 216 0 0 0 chr2 126999280 126999304 -123688550 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1173 166 5 20 chr2 126999306 126999505 -123688349 - AluJo SINE Alu -30 282 87 816 196 16 26 chr2 126999585 126999779 -123688075 + L1MB8 LINE L1 5978 6169 -9 337 288 110 18 chr2 127000662 127000825 -123687029 + MIR SINE MIR 79 256 -6 41 63 0 42 chr2 127001026 127001168 -123686686 + AT_rich Low_complexity Low_complexity 1 136 0 21 71 0 0 chr2 127001625 127001667 -123686187 + AT_rich Low_complexity Low_complexity 1 42 0 183 80 0 0 chr2 127003379 127003404 -123684450 + (TTA)n Simple_repeat Simple_repeat 2 26 0 298 280 50 20 chr2 127004143 127004243 -123683611 + MIR SINE MIR 14 116 -146 22 35 0 0 chr2 127004261 127004290 -123683564 + AT_rich Low_complexity Low_complexity 1 29 0 896 168 45 11 chr2 127004912 127005091 -123682763 - Tigger2 DNA MER2_type -1 2717 2533 * 1138 128 30 15 chr2 127005066 127005269 -123682585 - Tigger2 DNA MER2_type -2512 206 1 1246 293 110 12 chr2 127005471 127005970 -123681884 - MLT1G LTR MaLR -11 579 32 754 287 104 70 chr2 127006213 127006655 -123681199 + MLT1G LTR MaLR 4 460 -107 369 0 0 0 chr2 127006757 127006798 -123681056 + (CA)n Simple_repeat Simple_repeat 2 42 0 24 32 0 0 chr2 127007096 127007127 -123680727 + AT_rich Low_complexity Low_complexity 1 31 0 360 293 70 49 chr2 127007485 127007772 -123680082 - L1M4 LINE L1 -3373 2773 2481 334 283 136 0 chr2 127007904 127008088 -123679766 - L1M4 LINE L1 -3823 2323 2115 1979 124 46 0 chr2 127008279 127008562 -123679292 - AluY SINE Alu -15 296 1 288 259 12 0 chr2 127009200 127009285 -123678569 + MER103 DNA DNA 78 163 -3 300 255 21 21 chr2 127009567 127009661 -123678193 - LTR67 LTR ERVL 0 557 464 2364 101 0 0 chr2 127010486 127010794 -123677060 + AluSq SINE Alu 1 308 -5 217 224 0 20 chr2 127010962 127011011 -123676843 - L2 LINE L2 -4 3268 3221 194 272 198 0 chr2 127011594 127011675 -123676179 - L2 LINE L2 0 3272 3176 623 252 7 0 chr2 127011759 127011898 -123675956 + FRAM SINE Alu 1 140 -36 228 67 0 0 chr2 127011909 127011939 -123675915 + (CAA)n Simple_repeat Simple_repeat 1 30 0 766 227 100 77 chr2 127012071 127012371 -123675483 + L1MB7 LINE L1 -553 4294967049 -6531 858 162 0 0 chr2 127012372 127012508 -123675346 + FRAM SINE Alu 11 146 -30 3692 215 51 12 chr2 127012654 127014242 -123673612 + L1MB7 LINE L1 4779 6410 -10 217 333 60 60 chr2 127015328 127015445 -123672409 + L2 LINE L2 3155 3271 -1 398 248 27 67 chr2 127016459 127016608 -123671246 + MIR SINE MIR 52 194 -68 23 0 0 0 chr2 127017196 127017219 -123670635 + AT_rich Low_complexity Low_complexity 1 23 0 660 257 43 72 chr2 127017298 127017826 -123670028 + L1MB1 LINE L1 1977 2790 -4706 953 274 27 27 chr2 127017969 127018547 -123669307 + L1MB1 LINE L1 3315 3900 -3665 2120 146 44 16 chr2 127018547 127018930 -123668924 - Tigger4(Zombi) DNA MER2_type -1 2730 2337 761 189 8 0 chr2 127018926 127019053 -123668801 - Tigger4(Zombi) DNA MER2_type -2603 128 1 * 308 161 48 0 chr2 127019008 127019070 -123668784 + MER46A DNA MER2_type 99 163 -73 * 2405 257 60 18 chr2 127019080 127020032 -123667822 + L1MB1 LINE L1 3927 4918 -2647 240 214 0 0 chr2 127020038 127020094 -123667760 + GA-rich Low_complexity Low_complexity 3 58 0 232 263 26 40 chr2 127021695 127021771 -123666083 + L2 LINE L2 3007 3081 -191 234 0 0 0 chr2 127022315 127022341 -123665513 + (GA)n Simple_repeat Simple_repeat 1 26 0 2051 118 6 31 chr2 127022429 127022750 -123665104 + AluSq SINE Alu 1 313 0 259 272 33 115 chr2 127022972 127023303 -123664551 - L1ME1 LINE L1 -5 6161 5858 21 0 0 0 chr2 127024015 127024036 -123663818 + AT_rich Low_complexity Low_complexity 1 21 0 10104 39 0 1 chr2 127026835 127028842 -123659012 + L1PA5 LINE L1 4147 6153 -1 2723 147 22 13 chr2 127028842 127029431 -123658423 - MER4E LTR ERV1 -7 759 1 1051 43 0 14 chr2 127031265 127031403 -123656451 + L1PA4 LINE L1 6020 6155 0 208 244 0 0 chr2 127031769 127031814 -123656040 + L2 LINE L2 3262 3306 -7 218 213 0 0 chr2 127031930 127031977 -123655877 + (TA)n Simple_repeat Simple_repeat 2 48 0 230 304 51 89 chr2 127032178 127032336 -123655518 - MER5A DNA MER1_type 0 189 38 354 317 110 24 chr2 127032358 127032522 -123655332 + MER5B DNA MER1_type 1 178 0 4835 166 6 5 chr2 127032559 127033433 -123654421 + L1MA6 LINE L1 5421 6295 -5 2241 229 54 7 chr2 127035400 127036106 -123651748 + L1MB1 LINE L1 4939 5758 -1807 1230 178 108 15 chr2 127036108 127036476 -123651378 - Tigger2 DNA MER2_type -7 2711 1 3155 238 31 35 chr2 127036476 127036882 -123650972 + L1MB1 LINE L1 5755 6161 -1570 2265 99 0 20 chr2 127036882 127037184 -123650670 + AluY SINE Alu 1 296 -15 3155 238 31 35 chr2 127037184 127037747 -123650107 + L1MB1 LINE L1 6161 6730 -1001 207 0 0 0 chr2 127037747 127037770 -123650084 + (CAG)n Simple_repeat Simple_repeat 1 23 0 3155 238 31 35 chr2 127037770 127038107 -123649747 + L1MB1 LINE L1 6730 7067 -664 1979 191 32 11 chr2 127038207 127038584 -123649270 + Tigger2 DNA MER2_type 2334 2718 0 1223 228 55 0 chr2 127038584 127038928 -123648926 + L1MB1 LINE L1 7064 7455 -255 1975 136 24 7 chr2 127038949 127039243 -123648611 + AluSx SINE Alu 3 301 -11 1368 255 57 49 chr2 127039257 127040792 -123647062 + L1MB3 LINE L1 1239 2884 -3498 * 3829 216 35 26 chr2 127040790 127041053 -123646801 + L1MB3 LINE L1 4656 4915 -1504 225 0 0 0 chr2 127041053 127041078 -123646776 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3829 216 35 26 chr2 127041078 127041576 -123646278 + L1MB3 LINE L1 4915 5407 -1012 1903 144 70 14 chr2 127041576 127041931 -123645923 - THE1C LTR MaLR 0 375 1 3829 216 35 26 chr2 127041931 127042511 -123645343 + L1MB3 LINE L1 5407 6024 -395 2272 78 0 0 chr2 127042511 127042823 -123645031 - AluY SINE Alu 0 312 1 3829 216 35 26 chr2 127042823 127043182 -123644672 + L1MB3 LINE L1 6024 6378 -41 22 56 0 0 chr2 127043279 127043315 -123644539 + AT_rich Low_complexity Low_complexity 1 36 0 348 24 0 0 chr2 127043393 127043434 -123644420 + (GGGA)n Simple_repeat Simple_repeat 4 44 0 30 27 0 0 chr2 127043588 127043625 -123644229 + AT_rich Low_complexity Low_complexity 1 37 0 548 280 29 97 chr2 127043892 127044248 -123643606 + MLT1I LTR MaLR 80 409 0 570 314 52 9 chr2 127045757 127045986 -123641868 - MIR SINE MIR -20 242 4 560 236 5 65 chr2 127046837 127047036 -123640818 + MLT1E2 LTR MaLR 1 187 -439 930 169 81 129 chr2 127047036 127047308 -123640546 + AluJo SINE Alu 30 288 -24 913 264 52 41 chr2 127047404 127047673 -123640181 + MLT1E2 LTR MaLR 355 626 0 368 304 136 11 chr2 127048439 127048630 -123639224 + MLT1J2 LTR MaLR 103 317 -133 216 97 0 0 chr2 127049410 127049441 -123638413 + (TACG)n Simple_repeat Simple_repeat 2 32 0 1827 65 4 0 chr2 127049446 127049676 -123638178 - AluY SINE Alu -3 308 78 2404 81 0 3 chr2 127050643 127050952 -123636902 - AluY SINE Alu -3 308 1 1562 180 3 65 chr2 127051035 127051357 -123636497 - AluSx SINE Alu -10 302 1 291 28 0 0 chr2 127051465 127051501 -123636353 + (TG)n Simple_repeat Simple_repeat 1 36 0 300 369 16 21 chr2 127052153 127052340 -123635514 + L1 LINE L1 4075 4260 -1886 1318 251 142 56 chr2 127052349 127053395 -123634459 + L1MC5 LINE L1 6772 7907 -54 358 264 11 11 chr2 127053890 127053981 -123633873 - L2 LINE L2 -4 3268 3178 21 0 0 0 chr2 127055430 127055451 -123632403 + AT_rich Low_complexity Low_complexity 1 21 0 534 296 145 25 chr2 127055523 127055840 -123632014 + Tigger8 DNA MER2_type 45 399 -267 261 363 37 0 chr2 127056096 127056231 -123631623 - MIR SINE MIR -72 190 51 31 26 0 0 chr2 127056284 127056322 -123631532 + AT_rich Low_complexity Low_complexity 1 38 0 2111 119 3 3 chr2 127057035 127057337 -123630517 + AluSg SINE Alu 1 302 -8 306 0 0 0 chr2 127057377 127057411 -123630443 + (TG)n Simple_repeat Simple_repeat 2 35 0 197 341 57 72 chr2 127057801 127058128 -123629726 - L2 LINE L2 -669 2645 2324 267 79 0 0 chr2 127058128 127058166 -123629688 + (TG)n Simple_repeat Simple_repeat 2 39 0 197 341 57 72 chr2 127058166 127058240 -123629614 - L2 LINE L2 -990 2324 2250 2374 72 0 25 chr2 127060390 127060708 -123627146 - AluY SINE Alu -1 310 1 895 260 61 20 chr2 127060755 127061051 -123626803 - LTR38 LTR ERV1 -162 394 87 279 254 196 22 chr2 127062617 127062755 -123625099 + MIR3 SINE MIR 31 192 -16 24 53 0 0 chr2 127063520 127063558 -123624296 + AT_rich Low_complexity Low_complexity 1 38 0 43356 45 2 1 chr2 127063568 127069709 -123618145 + L1PA3 LINE L1 6 6152 -3 243 305 69 30 chr2 127069824 127069955 -123617899 + L1ME3 LINE L1 5511 5646 -475 342 0 0 0 chr2 127069974 127070012 -123617842 + (TG)n Simple_repeat Simple_repeat 2 39 0 203 169 0 26 chr2 127070037 127070114 -123617740 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 261 111 0 0 chr2 127070858 127070894 -123616960 + MLT1J LTR MaLR 97 132 -379 354 291 41 45 chr2 127071245 127071513 -123616341 + L1ME3 LINE L1 5896 6162 0 1456 257 24 26 chr2 127071575 127071992 -123615862 + MLT1C LTR MaLR 1 416 -51 302 311 29 10 chr2 127072316 127072419 -123615435 - MIR SINE MIR -94 168 64 3418 154 16 149 chr2 127072474 127073475 -123614379 - MER4D LTR ERV1 0 903 1 1770 207 128 83 chr2 127073497 127074315 -123613539 - L1MDa LINE L1 -3959 2685 1831 759 191 27 33 chr2 127074295 127074478 -123613376 - L1MDa LINE L1 -5328 1319 1138 * 33 66 0 0 chr2 127074512 127074573 -123613281 + AT_rich Low_complexity Low_complexity 1 61 0 415 309 6 6 chr2 127074620 127074798 -123613056 - L1ME4a LINE L1 -230 5891 5714 336 187 0 88 chr2 127074812 127074903 -123612951 - L1MA9 LINE L1 -34 6257 6175 269 189 0 0 chr2 127074900 127074953 -123612901 - L1MDa LINE L1 -5495 1152 1100 * 227 273 0 0 chr2 127074955 127075010 -123612844 - L1MDa LINE L1 -4524 2120 2066 * 1402 291 107 48 chr2 127074998 127075678 -123612176 - L1MDa LINE L1 -5524 1123 404 310 307 51 31 chr2 127075678 127075983 -123611871 + MLT1G LTR MaLR 94 433 -109 225 235 0 20 chr2 127076011 127076062 -123611792 + MLT1G LTR MaLR 536 585 -8 320 321 179 41 chr2 127076321 127076763 -123611091 - HAL1 LINE L1 -2003 504 2 21 0 0 0 chr2 127077419 127077440 -123610414 + AT_rich Low_complexity Low_complexity 1 21 0 219 319 14 14 chr2 127077710 127077782 -123610072 + MIR SINE MIR 41 112 -96 203 331 15 0 chr2 127078651 127078730 -123609124 + MIR SINE MIR 71 151 -57 278 292 56 15 chr2 127079021 127079216 -123608638 - L1ME4a LINE L1 -230 5891 5689 * 2417 263 29 31 chr2 127079211 127080010 -123607844 - L1ME1 LINE L1 -5 6161 5365 723 288 88 10 chr2 127080031 127080445 -123607409 - L1MEc LINE L1 -4549 1666 1120 714 240 138 18 chr2 127080566 127080841 -123607013 - L1MEc LINE L1 -5426 970 663 268 263 53 0 chr2 127080900 127080976 -123606878 + MER96 DNA MER1_type? 3 82 -93 311 272 104 8 chr2 127081014 127081139 -123606715 - MER96 DNA MER1_type? -35 140 4 1358 289 43 14 chr2 127081160 127081675 -123606179 - L1MEc LINE L1 -5822 574 45 21 0 0 0 chr2 127081756 127081777 -123606077 + AT_rich Low_complexity Low_complexity 1 21 0 302 268 142 54 chr2 127083390 127083580 -123604274 - L1ME4a LINE L1 -476 5645 5437 8875 177 46 1 chr2 127083698 127086893 -123600961 - L1PBa LINE L1 -2475 4387 903 673 239 6 0 chr2 127086918 127087081 -123600773 - L1PBa LINE L1 -6694 169 6 3040 131 25 4 chr2 127087094 127087614 -123600240 - L1P4 LINE L1 -366 5800 5270 2963 212 42 1 chr2 127087714 127088407 -123599447 - L1P4 LINE L1 -864 5282 4562 213 39 0 0 chr2 127089180 127089206 -123598648 + (CA)n Simple_repeat Simple_repeat 2 27 0 235 413 14 7 chr2 127091210 127091353 -123596501 + L3 LINE CR1 1322 1465 -112 343 370 42 6 chr2 127091412 127091577 -123596277 - MIR SINE MIR -66 196 26 551 89 13 0 chr2 127093482 127093561 -123594293 + MADE1 DNA Mariner 1 80 0 1907 128 0 31 chr2 127094077 127094366 -123593488 - AluSx SINE Alu -20 292 13 1055 215 10 10 chr2 127094511 127094716 -123593138 - AluJb SINE Alu -23 289 85 400 282 20 87 chr2 127094716 127095167 -123592687 + HAL1 LINE L1 1089 1509 -998 1675 220 9 6 chr2 127097463 127097804 -123590050 - MLT1A1 LTR MaLR -2 363 22 807 245 5 10 chr2 127098144 127098336 -123589518 + MER34 LTR ERV1 1 191 -351 2003 142 6 17 chr2 127098346 127098692 -123589162 - L1PA14 LINE L1 -16 6145 5804 667 112 0 0 chr2 127098692 127098790 -123589064 + L1PA14 LINE L1 5711 5808 -353 847 221 64 29 chr2 127098791 127099124 -123588730 + MER34 LTR ERV1 169 541 -1 494 276 68 68 chr2 127100136 127100487 -123587367 - L1MC5 LINE L1 -57 7904 7554 242 0 0 0 chr2 127101045 127101075 -123586779 + L1PA6 LINE L1 6116 6145 -9 1238 154 103 26 chr2 127101083 127101316 -123586538 + THE1B LTR MaLR 56 306 -58 183 100 0 0 chr2 127101342 127101372 -123586482 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 327 297 89 58 chr2 127101601 127101928 -123585926 - L1ME4a LINE L1 -56 6065 5729 196 330 85 9 chr2 127102036 127102142 -123585712 - MIR SINE MIR -59 149 45 218 274 0 0 chr2 127102401 127102452 -123585402 + (TATG)n Simple_repeat Simple_repeat 3 53 0 217 253 40 10 chr2 127102402 127102501 -123585353 + (TA)n Simple_repeat Simple_repeat 1 102 0 * 22 0 0 0 chr2 127102524 127102546 -123585308 + AT_rich Low_complexity Low_complexity 1 22 0 245 275 0 22 chr2 127102551 127102642 -123585212 + L1MC4 LINE L1 6619 6707 -1335 3125 144 0 4 chr2 127102669 127103168 -123584686 - LOR1a LTR ERV1 0 497 1 1507 189 19 7 chr2 127103618 127103888 -123583966 - AluJo SINE Alu -37 275 3 266 242 58 33 chr2 127103899 127104019 -123583835 - L1ME4a LINE L1 -478 5643 5521 22 0 0 0 chr2 127104449 127104471 -123583383 + AT_rich Low_complexity Low_complexity 1 22 0 527 41 0 27 chr2 127104848 127104921 -123582933 - L1PA8 LINE L1 -3 6169 6099 398 96 0 0 chr2 127104925 127104977 -123582877 + L1PA8 LINE L1 6029 6080 -92 2213 113 7 3 chr2 127105499 127105809 -123582045 - AluSq SINE Alu -2 311 1 25 51 0 0 chr2 127105881 127105920 -123581934 + AT_rich Low_complexity Low_complexity 1 39 0 839 143 7 0 chr2 127106549 127106703 -123581151 + L1M LINE L1 5265 5419 -886 671 331 96 41 chr2 127106858 127107423 -123580431 + L2 LINE L2 1930 2525 -789 1784 229 40 26 chr2 127107465 127107920 -123579934 + MLT1C LTR MaLR 7 467 0 576 283 99 64 chr2 127107936 127108360 -123579494 + L2 LINE L2 2804 3242 -71 908 228 104 5 chr2 127108360 127108562 -123579292 + MLT1A1 LTR MaLR 1 222 -143 582 237 7 15 chr2 127108591 127108726 -123579128 - MER74A LTR ERVL -411 147 14 569 203 133 7 chr2 127108872 127109015 -123578839 - MLT1A1 LTR MaLR 0 365 205 1498 219 24 30 chr2 127109060 127109394 -123578460 + MER74A LTR ERVL 225 556 -2 1061 151 22 0 chr2 127109394 127109573 -123578281 + L1M4 LINE L1 5449 5631 -553 217 254 119 15 chr2 127109628 127109695 -123578159 - MIR SINE MIR 0 262 189 * 220 302 0 0 chr2 127109689 127109742 -123578112 - MIR SINE MIR -208 54 2 345 299 22 43 chr2 127110488 127110753 -123577101 + L1M4 LINE L1 2289 2546 -3600 23 33 0 0 chr2 127110931 127110961 -123576893 + AT_rich Low_complexity Low_complexity 1 30 0 670 150 18 0 chr2 127110961 127111074 -123576780 + L1MC1 LINE L1 6219 6333 0 2168 108 14 0 chr2 127111357 127111654 -123576200 - AluY SINE Alu -10 301 1 215 313 43 52 chr2 127111654 127111769 -123576085 - MER5A DNA MER1_type -72 117 4 447 78 0 0 chr2 127111969 127112033 -123575821 + (TGGA)n Simple_repeat Simple_repeat 1 64 0 211 339 42 25 chr2 127112201 127112319 -123575535 - L2 LINE L2 -1310 2004 1885 206 241 0 37 chr2 127112636 127112690 -123575164 - MIR SINE MIR -10 252 201 324 246 82 18 chr2 127113988 127114098 -123573756 - MLT1H LTR MaLR 0 549 433 282 171 200 0 chr2 127114584 127114654 -123573200 - MER58A DNA MER1_type 0 156 73 7015 58 0 2 chr2 127114659 127116009 -123571845 - L1PA5 LINE L1 0 6154 4804 1936 34 0 4 chr2 127116009 127116245 -123571609 + L1PA5 LINE L1 4550 4784 -1362 429 274 11 0 chr2 127116245 127116340 -123571514 - MER58A DNA MER1_type -11 96 1 330 276 125 26 chr2 127116362 127116514 -123571340 - MLT1G1 LTR MaLR -12 555 389 458 284 143 2 chr2 127116548 127116806 -123571048 - MLT1G1 LTR MaLR -291 264 5 2202 125 0 0 chr2 127117232 127117543 -123570311 + AluSq SINE Alu 1 311 -2 332 304 78 19 chr2 127118435 127118794 -123569060 - L1M4 LINE L1 -2174 3972 3593 333 326 14 7 chr2 127120602 127120740 -123567114 - L1MEc LINE L1 -4718 1678 1540 21 57 0 0 chr2 127120953 127120988 -123566866 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr2 127121066 127121091 -123566763 + AT_rich Low_complexity Low_complexity 1 25 0 2144 111 0 20 chr2 127121534 127121831 -123566023 - AluSx SINE Alu -9 303 13 229 350 29 10 chr2 127173854 127173957 -123513897 + L3 LINE CR1 928 1032 -545 2046 69 0 8 chr2 127174314 127174574 -123513280 - AluY SINE Alu -22 289 32 302 317 24 24 chr2 127174574 127174697 -123513157 - L2 LINE L2 -600 2714 2592 401 229 19 8 chr2 127174836 127174963 -123512891 - L1MC/D LINE L1 -325 5796 5688 898 284 154 0 chr2 127175058 127175357 -123512497 - MLT1F LTR MaLR -49 493 149 1002 303 15 10 chr2 127175363 127175762 -123512092 - L1MEc LINE L1 -4588 1808 1408 2485 294 38 10 chr2 127175796 127176691 -123511163 - L1MEc LINE L1 -5426 970 51 203 358 102 23 chr2 127176710 127176886 -123510968 + L2 LINE L2 2594 2783 -531 480 263 24 114 chr2 127177610 127177865 -123509989 + MIR SINE MIR 31 262 0 1850 139 43 38 chr2 127178998 127179371 -123508483 + THE1C LTR MaLR 1 375 0 467 194 92 0 chr2 127180093 127180191 -123507663 + MLT1F1 LTR MaLR 2 108 -459 1250 130 0 5 chr2 127180191 127180391 -123507463 + HERVL-B3 LTR ERVL 5456 5654 0 1946 215 31 79 chr2 127180391 127180973 -123506881 + MLT2B3 LTR ERVL 1 554 0 1242 200 182 21 chr2 127180974 127181359 -123506495 + MLT1F1 LTR MaLR 105 551 -16 181 345 36 12 chr2 127181379 127181463 -123506391 - MER5A DNA MER1_type -69 120 35 187 234 106 0 chr2 127181840 127181887 -123505967 + L2 LINE L2 3256 3307 -6 318 297 73 30 chr2 127184181 127184346 -123503508 + MIR SINE MIR 86 257 -5 204 209 0 0 chr2 127184346 127184389 -123503465 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 302 265 10 51 chr2 127184577 127184675 -123503179 - MIR SINE MIR -29 233 140 717 265 106 20 chr2 127185985 127186396 -123501458 + MER57A LTR ERV1 10 402 -1 371 233 53 27 chr2 127186397 127186547 -123501307 - Zaphod DNA AcHobo -65 3966 3813 650 185 41 82 chr2 127186569 127186812 -123501042 - Zaphod DNA AcHobo -649 3382 3150 311 136 57 23 chr2 127187469 127187557 -123500297 - L1MB2 LINE L1 -12 6159 6069 309 156 141 0 chr2 127187565 127187629 -123500225 + L1MB3 LINE L1 6086 6158 -25 1167 199 7 43 chr2 127187662 127187938 -123499916 - L1MB3 LINE L1 -110 6073 5808 * 2957 265 54 23 chr2 127187924 127189310 -123498544 - L1M4 LINE L1 -2576 3806 2378 1469 225 11 0 chr2 127189314 127189594 -123498260 - AluJo SINE Alu -18 294 12 1202 125 5 22 chr2 127189606 127189830 -123498024 - L1M4 LINE L1 -3991 2393 2174 8328 188 41 34 chr2 127189836 127191725 -123496129 - L1M4 LINE L1 -4463 1921 19 21 0 0 0 chr2 127192270 127192291 -123495563 + AT_rich Low_complexity Low_complexity 1 21 0 203 158 0 0 chr2 127192856 127192894 -123494960 + (TG)n Simple_repeat Simple_repeat 2 39 0 368 304 49 81 chr2 127192967 127193214 -123494640 - MIR SINE MIR -20 242 4 24 100 0 0 chr2 127193353 127193433 -123494421 + AT_rich Low_complexity Low_complexity 1 80 0 266 268 105 38 chr2 127193971 127194210 -123493644 - L1MB3 LINE L1 -2254 5554 5300 2493 44 0 35 chr2 127194785 127195102 -123492752 + AluY SINE Alu 1 306 -5 207 0 0 0 chr2 127197492 127197515 -123490339 + (CATG)n Simple_repeat Simple_repeat 1 23 0 190 326 23 35 chr2 127197801 127197887 -123489967 + MIR SINE MIR 16 100 -108 2536 43 3 0 chr2 127198535 127198840 -123489014 + AluY SINE Alu 1 306 -5 298 254 84 56 chr2 127198901 127199043 -123488811 + MIR SINE MIR 53 198 -64 723 62 10 0 chr2 127199091 127199187 -123488667 - Alu SINE Alu -8 302 206 222 330 122 0 chr2 127200716 127200831 -123487023 + MIR SINE MIR 19 147 -61 45 79 0 0 chr2 127201255 127201356 -123486498 + AT_rich Low_complexity Low_complexity 1 101 0 371 150 0 25 chr2 127202216 127202296 -123485558 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 303 291 113 40 chr2 127202304 127202551 -123485303 + L2 LINE L2 3045 3309 -4 2092 116 3 0 chr2 127204913 127205220 -123482634 - AluSq SINE Alu 0 308 1 209 246 46 15 chr2 127205245 127205310 -123482544 + MIR SINE MIR 59 125 -137 2373 82 0 7 chr2 127205712 127206018 -123481836 - AluY SINE Alu -7 304 1 254 331 36 30 chr2 127206728 127206894 -123480960 - L1MEc LINE L1 -4606 1790 1624 2014 242 67 48 chr2 127206917 127207703 -123480151 - L1ME2 LINE L1 -21 6938 6138 4542 49 5 0 chr2 127207723 127208319 -123479535 + L1P LINE L1 2913 3511 -2635 911 199 18 0 chr2 127208448 127208517 -123479337 + AluJb SINE Alu 58 124 -188 258 32 0 0 chr2 127208517 127208548 -123479306 + (CA)n Simple_repeat Simple_repeat 2 32 0 911 199 18 0 chr2 127208548 127208644 -123479210 + AluJb SINE Alu 124 226 -86 1171 232 42 29 chr2 127208674 127209058 -123478796 - L1ME1 LINE L1 -140 6026 5638 276 197 0 0 chr2 127209074 127209135 -123478719 - L1ME2 LINE L1 -844 6097 6037 1427 229 72 74 chr2 127209135 127209435 -123478419 + MLT1D LTR MaLR 1 301 -204 2018 142 10 0 chr2 127209435 127209744 -123478110 + AluSx SINE Alu 1 312 0 1427 229 72 74 chr2 127209744 127209944 -123477910 + MLT1D LTR MaLR 301 500 -5 2106 258 110 42 chr2 127209961 127210470 -123477384 - L1ME2 LINE L1 -912 6029 5556 2195 116 3 0 chr2 127210470 127210772 -123477082 - AluSq SINE Alu -6 307 5 2106 258 110 42 chr2 127210772 127211567 -123476287 - L1ME2 LINE L1 -1385 5556 4636 2154 285 41 19 chr2 127211584 127212624 -123475230 - L1ME2 LINE L1 -2734 4207 3145 741 330 75 55 chr2 127212682 127214146 -123473708 - L1MEc LINE L1 -4893 1503 11 362 251 37 21 chr2 127214247 127214438 -123473416 - L1ME2 LINE L1 -4933 2189 1996 539 297 95 15 chr2 127214543 127215013 -123472841 - L1ME2 LINE L1 -4887 1536 1262 247 54 0 0 chr2 127215441 127215478 -123472376 - L1PA11 LINE L1 0 6174 6138 2254 118 6 14 chr2 127215879 127216227 -123471627 + LTR8 LTR ERV1 1 345 -346 4533 119 92 30 chr2 127216227 127217611 -123470243 - pTR5 LTR ERV1 0 2606 1524 2252 152 0 14 chr2 127217611 127217966 -123469888 + LTR8 LTR ERV1 342 691 0 2810 113 74 9 chr2 127218065 127218527 -123469327 - LTR22B LTR ERVK 0 492 1 1208 107 17 0 chr2 127218886 127219064 -123468790 - LTR22B LTR ERVK -271 221 41 2410 255 100 27 chr2 127219263 127220004 -123467850 + L1MA5 LINE L1 1 795 -6414 * 2870 206 55 91 chr2 127219983 127221113 -123466741 + L1MA5 LINE L1 1642 2714 -4495 180 0 0 0 chr2 127221121 127221141 -123466713 + (CA)n Simple_repeat Simple_repeat 1 20 0 261 0 0 0 chr2 127221153 127221182 -123466672 + (TG)n Simple_repeat Simple_repeat 2 30 0 243 61 0 0 chr2 127221181 127221214 -123466640 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 504 0 0 0 chr2 127221770 127221826 -123466028 + (TA)n Simple_repeat Simple_repeat 1 56 0 2663 224 49 15 chr2 127221835 127224237 -123463617 + L1MA5 LINE L1 2828 5148 -2214 1661 201 7 3 chr2 127224237 127224530 -123463324 + AluJb SINE Alu 1 294 -18 2663 224 49 15 chr2 127224530 127224556 -123463298 + L1MA5 LINE L1 5148 5172 -2190 300 27 0 0 chr2 127224556 127224593 -123463261 + (CA)n Simple_repeat Simple_repeat 1 37 0 2663 224 49 15 chr2 127224593 127226444 -123461410 + L1MA5 LINE L1 5172 7362 0 1225 169 21 0 chr2 127226444 127226681 -123461173 + Tigger7 DNA MER2_type 2242 2483 -4 3404 230 52 24 chr2 127226683 127227509 -123460345 - MER21B LTR ERV1 -2 861 13 1316 217 19 4 chr2 127227800 127228098 -123459756 - MER57A LTR ERV1 0 403 131 665 112 12 154 chr2 127228106 127228275 -123459579 - MER57A LTR ERV1 -236 167 23 593 323 6 0 chr2 127228696 127228857 -123458997 + MER5A DNA MER1_type 23 184 -5 185 343 112 52 chr2 127228902 127229188 -123458666 - L2 LINE L2 -162 3110 2808 181 353 76 25 chr2 127229385 127229504 -123458350 - L2 LINE L2 -867 2447 2323 184 109 22 22 chr2 127229546 127229592 -123458262 + (TAA)n Simple_repeat Simple_repeat 3 48 0 210 358 37 9 chr2 127229801 127229910 -123457944 + L2 LINE L2 2852 2963 -309 2690 234 63 56 chr2 127230357 127231178 -123456676 - L1MC3 LINE L1 0 7995 7101 376 149 14 0 chr2 127231178 127231252 -123456602 + MER57A LTR ERV1 329 403 0 2690 234 63 56 chr2 127231252 127231641 -123456213 - L1MC3 LINE L1 -894 7101 6716 * 3023 193 65 23 chr2 127231632 127232372 -123455482 - L1MC3 LINE L1 -1358 6427 5657 404 309 105 0 chr2 127233005 127233167 -123454687 + MIR SINE MIR 48 226 -36 180 305 17 0 chr2 127233673 127233732 -123454122 + L2 LINE L2 3250 3309 -4 569 254 62 11 chr2 127235295 127235472 -123452382 - MIR SINE MIR -28 234 49 799 285 53 48 chr2 127235573 127236120 -123451734 + L1MC/D LINE L1 5254 5803 -2005 24 0 0 0 chr2 127237265 127237289 -123450565 + AT_rich Low_complexity Low_complexity 1 24 0 2175 115 0 19 chr2 127237710 127238023 -123449831 - AluSx SINE Alu -5 307 1 317 288 40 32 chr2 127238707 127238832 -123449022 - MIR3 SINE MIR -48 160 35 21 0 0 0 chr2 127238944 127238965 -123448889 + AT_rich Low_complexity Low_complexity 1 21 0 474 325 103 36 chr2 127241535 127242012 -123445842 + L2 LINE L2 2805 3313 0 284 204 0 0 chr2 127243769 127243823 -123444031 + MSTA LTR MaLR 1 54 -372 3080 71 2 14 chr2 127243823 127244243 -123443611 + L1PA8A LINE L1 5688 6102 -29 1922 180 63 6 chr2 127244284 127244650 -123443204 + MSTA LTR MaLR 42 428 0 1203 211 131 0 chr2 127246541 127246839 -123441015 - MER58B DNA MER1_type -1 340 4 2609 59 0 0 chr2 127247667 127247971 -123439883 + AluY SINE Alu 1 304 -7 407 333 49 24 chr2 127249577 127249823 -123438031 - MLT1L LTR MaLR -363 252 1 376 333 39 60 chr2 127250286 127250520 -123437334 - MIR SINE MIR -6 256 28 21 0 0 0 chr2 127250895 127250916 -123436938 + AT_rich Low_complexity Low_complexity 1 21 0 2728 71 3 0 chr2 127251699 127252063 -123435791 + L1PA8 LINE L1 5804 6168 -4 23 0 0 0 chr2 127252162 127252185 -123435669 + AT_rich Low_complexity Low_complexity 1 23 0 264 246 15 0 chr2 127252598 127252663 -123435191 + LTR16A1 LTR ERVL 36 101 -356 274 235 143 20 chr2 127253107 127253205 -123434649 + LTR16A1 LTR ERVL 172 281 -176 723 214 62 38 chr2 127255653 127255863 -123431991 - MIR SINE MIR -7 255 41 1886 125 79 0 chr2 127256799 127257079 -123430775 - AluSg SINE Alu -7 303 2 480 117 0 0 chr2 127257214 127257291 -123430563 + (GA)n Simple_repeat Simple_repeat 2 78 0 207 302 71 16 chr2 127259143 127259269 -123428585 - MIR SINE MIR -17 245 113 31 0 0 0 chr2 127259795 127259826 -123428028 + AT_rich Low_complexity Low_complexity 1 31 0 194 242 15 0 chr2 127260341 127260407 -123427447 + (TA)n Simple_repeat Simple_repeat 1 67 0 22 35 0 0 chr2 127260576 127260605 -123427249 + AT_rich Low_complexity Low_complexity 1 29 0 418 247 209 0 chr2 127260621 127260779 -123427075 - MIR SINE MIR -25 237 47 198 321 57 0 chr2 127260875 127260928 -123426926 - MIR SINE MIR -187 75 20 668 230 65 0 chr2 127260950 127261089 -123426765 + FAM SINE Alu 1 148 -37 486 179 0 0 chr2 127261096 127261191 -123426663 + GA-rich Low_complexity Low_complexity 1 95 0 6660 136 13 8 chr2 127261311 127262702 -123425152 - L1MA3 LINE L1 -1 7723 6325 5722 167 13 11 chr2 127262700 127263569 -123424285 - L1PB1 LINE L1 0 6151 5277 * 219 36 0 0 chr2 127263569 127263597 -123424257 + (TTG)n Simple_repeat Simple_repeat 1 28 0 5722 167 13 11 chr2 127263597 127264411 -123423443 - L1PB1 LINE L1 -874 5277 4466 400 241 83 0 chr2 127264412 127264505 -123423349 + L1 LINE L1 4305 4414 -1732 243 0 0 0 chr2 127264505 127264532 -123423322 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 400 241 83 0 chr2 127264532 127264571 -123423283 + L1 LINE L1 4414 4448 -1698 12665 177 39 10 chr2 127264572 127269444 -123418410 - L1MA3 LINE L1 -1224 6341 1323 23 0 0 0 chr2 127270084 127270107 -123417747 + AT_rich Low_complexity Low_complexity 1 23 0 313 138 15 31 chr2 127270447 127270512 -123417342 - MIR SINE MIR -108 154 91 233 369 58 19 chr2 127271456 127271559 -123416295 - L2 LINE L2 -6 3266 3160 1014 260 37 44 chr2 127271866 127272258 -123415596 + MLT1F1 LTR MaLR 176 548 -1 335 325 195 34 chr2 127272264 127272310 -123415544 - L2 LINE L2 -819 2495 2458 2406 80 6 10 chr2 127272310 127272621 -123415233 + AluY SINE Alu 1 310 -1 335 325 195 34 chr2 127272621 127273226 -123414628 - L2 LINE L2 -856 2458 1739 586 314 58 7 chr2 127273231 127273505 -123414349 - L2 LINE L2 -1791 1523 1236 838 71 0 71 chr2 127273542 127273669 -123414185 - AluSp/q SINE Alu -22 291 174 256 271 9 93 chr2 127273694 127273801 -123414053 - L2 LINE L2 -2134 1180 1083 245 305 123 26 chr2 127273929 127274083 -123413771 - L2 LINE L2 -2942 372 204 1972 133 26 0 chr2 127274427 127274729 -123413125 + AluSq SINE Alu 1 310 -3 252 0 0 0 chr2 127274954 127274982 -123412872 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2061 239 80 44 chr2 127276035 127276739 -123411115 - L1ME1 LINE L1 -5 6161 5433 241 108 0 0 chr2 127276845 127276882 -123410972 - L2 LINE L2 -1 3312 3276 211 287 69 11 chr2 127276994 127277081 -123410773 - L2 LINE L2 -257 3015 2924 5413 113 44 21 chr2 127277085 127278047 -123409807 + MER11C LTR ERVK 1 1071 0 237 108 0 0 chr2 127278203 127278240 -123409614 + (TG)n Simple_repeat Simple_repeat 2 38 0 214 347 0 31 chr2 127278725 127278823 -123409031 + MIR SINE MIR 16 110 -98 180 0 0 0 chr2 127279118 127279138 -123408716 + (CAATT)n Simple_repeat Simple_repeat 4 23 0 282 208 0 0 chr2 127279274 127279327 -123408527 - MLT1I LTR MaLR -17 392 340 1528 207 10 16 chr2 127279367 127279671 -123408183 + AluJo SINE Alu 3 304 -8 2473 80 0 0 chr2 127280575 127280886 -123406968 - AluY SINE Alu 0 311 1 1704 300 78 30 chr2 127282211 127283199 -123404655 + L2 LINE L2 2264 3313 0 23 33 0 0 chr2 127284247 127284277 -123403577 + AT_rich Low_complexity Low_complexity 1 30 0 1618 198 3 10 chr2 127284301 127284599 -123403255 - AluJb SINE Alu -16 296 1 243 260 70 20 chr2 127285813 127285913 -123401941 - L1MC4 LINE L1 -1324 6718 6614 313 350 83 52 chr2 127286049 127286208 -123401646 + HAL1 LINE L1 1095 1248 -1259 971 261 89 26 chr2 127286208 127286556 -123401298 + MLT1A2 LTR MaLR 1 370 -4 313 350 83 52 chr2 127286556 127286842 -123401012 + HAL1 LINE L1 1248 1554 -953 339 274 81 8 chr2 127287286 127287463 -123400391 + L1ME LINE L1 2275 2463 -3921 361 294 94 73 chr2 127287596 127287784 -123400070 + L1ME LINE L1 2632 2832 -3550 2247 115 0 0 chr2 127287784 127288079 -123399775 + AluSq SINE Alu 1 295 -18 361 294 94 73 chr2 127288079 127288230 -123399624 + L1ME LINE L1 2832 2978 -3404 214 156 44 0 chr2 127288343 127288388 -123399466 + (TA)n Simple_repeat Simple_repeat 1 47 0 693 262 122 0 chr2 127288654 127288891 -123398963 + L2 LINE L2 1800 2065 -1249 611 282 92 99 chr2 127289188 127289725 -123398129 + L2 LINE L2 2787 3312 -1 301 316 53 33 chr2 127289746 127289898 -123397956 + L1ME LINE L1 5139 5293 -1089 23 0 0 0 chr2 127289988 127290011 -123397843 + AT_rich Low_complexity Low_complexity 1 23 0 409 249 49 89 chr2 127290062 127290370 -123397484 + L1ME LINE L1 5490 5787 -611 3768 85 12 2 chr2 127290383 127290900 -123396954 - L1PA7 LINE L1 -8 6146 5625 333 98 0 0 chr2 127290900 127290951 -123396903 + L1P LINE L1 2716 2766 -3380 368 179 0 0 chr2 127291159 127291226 -123396628 - L1MB2 LINE L1 -7 6164 6098 25 51 0 0 chr2 127291316 127291355 -123396499 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 127291528 127291551 -123396303 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 127291575 127291597 -123396257 + AT_rich Low_complexity Low_complexity 1 22 0 306 324 69 53 chr2 127291789 127292150 -123395704 + L1M4 LINE L1 3115 3481 -2665 329 292 57 71 chr2 127292308 127292418 -123395436 + L1M4 LINE L1 3671 3781 -2365 1757 201 42 0 chr2 127292418 127292752 -123395102 + MER7A DNA MER2_type 1 346 0 329 292 57 71 chr2 127292752 127292922 -123394932 + L1M4 LINE L1 3781 3947 -2199 4473 155 46 65 chr2 127292934 127293550 -123394304 - L1MA9 LINE L1 0 6312 5721 3023 160 32 76 chr2 127293550 127294273 -123393581 + LTR8 LTR ERV1 1 691 0 4473 155 46 65 chr2 127294273 127294655 -123393199 - L1MA9 LINE L1 -591 5721 5333 2002 164 23 6 chr2 127294657 127295010 -123392844 + MLT1A1 LTR MaLR 7 365 0 3518 183 23 25 chr2 127295010 127295780 -123392074 - L1MA9 LINE L1 -810 5336 4568 1621 133 28 8 chr2 127295780 127296028 -123391826 - AluSx SINE Alu -59 253 1 3234 199 13 3 chr2 127296028 127296706 -123391148 + L1 LINE L1 3543 4227 -1919 1106 191 10 5 chr2 127296819 127297028 -123390826 - MER2 DNA MER2_type -135 210 1 438 174 74 33 chr2 127297028 127297149 -123390705 + L1 LINE L1 4226 4351 -1795 21 36 0 0 chr2 127297170 127297198 -123390656 + AT_rich Low_complexity Low_complexity 1 28 0 204 125 0 0 chr2 127297254 127297286 -123390568 + (TA)n Simple_repeat Simple_repeat 2 33 0 23 0 0 0 chr2 127297299 127297322 -123390532 + AT_rich Low_complexity Low_complexity 1 23 0 630 294 32 41 chr2 127297977 127298722 -123389132 + L1ME LINE L1 511 1143 -4835 1391 114 10 0 chr2 127298743 127298944 -123388910 - L1PA7 LINE L1 -2 6152 5950 1036 277 36 8 chr2 127298957 127299343 -123388511 + L1ME3 LINE L1 5595 5991 -173 1877 216 50 83 chr2 127299355 127300569 -123387285 - L1M4 LINE L1 -362 6627 5463 * 2064 243 104 38 chr2 127300541 127300942 -123386912 - L1M4 LINE L1 -2270 4687 4314 1544 163 112 4 chr2 127300942 127301218 -123386636 - AluSg1 SINE Alu -3 306 1 2064 243 104 38 chr2 127301218 127301609 -123386245 - L1M4 LINE L1 -2643 4314 3951 231 103 0 0 chr2 127301609 127301648 -123386206 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 2064 243 104 38 chr2 127301648 127301916 -123385938 - L1M4 LINE L1 -3006 3951 3555 522 107 0 6 chr2 127301918 127302162 -123385692 + AluSq SINE Alu 3 301 -12 1818 252 46 41 chr2 127302163 127302367 -123385487 - L1MEc LINE L1 -3391 3566 3365 1937 110 41 17 chr2 127302367 127302657 -123385197 + AluSx SINE Alu 2 298 -14 1818 252 46 41 chr2 127302657 127303438 -123384416 - L1MEc LINE L1 -3592 3365 2611 849 258 66 12 chr2 127303531 127304524 -123383330 - L1MEc LINE L1 -5771 1088 4 370 298 14 0 chr2 127304525 127304666 -123383188 + L1ME3 LINE L1 6020 6162 0 596 455 98 22 chr2 127304761 127305218 -123382636 - LTR33A LTR ERVL -3 520 29 627 126 0 0 chr2 127305223 127305334 -123382520 + L1M LINE L1 5258 5368 -812 1807 186 0 3 chr2 127305346 127305663 -123382191 - Tigger1 DNA MER2_type -2101 317 2 337 276 25 70 chr2 127307221 127307420 -123380434 - MIR SINE MIR -14 248 59 233 241 13 51 chr2 127307465 127307507 -123380347 - L1M3 LINE L1 -424 5759 5718 1393 164 75 30 chr2 127307507 127307842 -123380012 - L1MA7 LINE L1 -12 6279 5684 276 141 0 113 chr2 127307840 127307911 -123379943 - L1M3 LINE L1 -738 5440 5378 * 8643 144 62 11 chr2 127307913 127309425 -123378429 + Tigger1 DNA MER2_type 830 2418 0 255 322 34 60 chr2 127310207 127310356 -123377498 - MIR SINE MIR -70 192 48 574 292 109 21 chr2 127310948 127311323 -123376531 + LTR16A LTR ERVL 26 457 0 1170 197 65 100 chr2 127313315 127313706 -123374148 - MLT1A1 LTR MaLR 0 365 6 231 307 89 40 chr2 127313803 127313904 -123373950 + L2 LINE L2 3132 3237 -35 2075 298 65 52 chr2 127313981 127315212 -123372642 + L2 LINE L2 2082 3312 -1 1800 174 0 0 chr2 127317207 127317489 -123370365 + MLT1A1 LTR MaLR 83 364 -1 25 31 0 0 chr2 127318065 127318097 -123369757 + AT_rich Low_complexity Low_complexity 1 32 0 207 0 0 0 chr2 127318752 127318775 -123369079 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2287 79 3 0 chr2 127318778 127319069 -123368785 - AluSq SINE Alu -21 292 1 334 304 0 0 chr2 127319200 127319292 -123368562 + L1MC4 LINE L1 6612 6703 -1339 397 266 138 81 chr2 127320697 127321219 -123366635 - L1ME4a LINE L1 -4 6117 5566 366 129 0 0 chr2 127321461 127321523 -123366331 + (TG)n Simple_repeat Simple_repeat 2 63 0 246 125 45 45 chr2 127321523 127321548 -123366306 + (TA)n Simple_repeat Simple_repeat 2 26 -63 1848 141 59 59 chr2 127321548 127321923 -123365931 + THE1C LTR MaLR 1 375 0 246 125 45 45 chr2 127321923 127321985 -123365869 + (TA)n Simple_repeat Simple_repeat 25 89 0 414 0 0 0 chr2 127322127 127322173 -123365681 + (CA)n Simple_repeat Simple_repeat 1 46 0 2172 155 8 8 chr2 127322207 127322568 -123365286 - MLT2D LTR ERVL -49 365 5 274 296 105 17 chr2 127322846 127323018 -123364836 + MIR SINE MIR 62 248 -14 226 213 53 11 chr2 127323360 127323454 -123364400 + (TA)n Simple_repeat Simple_repeat 2 99 0 5299 109 97 32 chr2 127326376 127327467 -123360387 - MER11A LTR ERVK 0 1266 1 304 361 49 0 chr2 127327626 127327770 -123360084 + HERVL LTR ERVL 1842 1992 -3662 16275 170 50 9 chr2 127327894 127331169 -123356685 - L1PB1 LINE L1 -189 6678 3541 3010 157 80 21 chr2 127331169 127331747 -123356107 + LTR9 LTR ERV1 1 612 0 16275 170 50 9 chr2 127331747 127332986 -123354868 - L1PB1 LINE L1 -3326 3541 2355 297 51 0 0 chr2 127332986 127333025 -123354829 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 16275 170 50 9 chr2 127333025 127334903 -123352951 - L1PB1 LINE L1 -4512 2355 3 2259 245 46 55 chr2 127335428 127336081 -123351773 - L1P3 LINE L1 -5805 992 346 855 223 0 0 chr2 127336108 127336305 -123351549 - L1P LINE L1 -1663 4483 4287 1144 186 9 5 chr2 127336312 127336533 -123351321 + L1P LINE L1 3773 3994 -2152 9654 223 42 6 chr2 127336600 127338349 -123349505 - L1P LINE L1 -1861 4285 2431 237 33 0 0 chr2 127338349 127338379 -123349475 + (TG)n Simple_repeat Simple_repeat 2 31 0 9654 223 42 6 chr2 127338379 127338940 -123348914 - L1P LINE L1 -3715 2431 1892 1962 239 39 0 chr2 127338928 127339317 -123348537 - L1P3 LINE L1 -6379 408 5 * 2339 119 33 25 chr2 127339317 127339678 -123348176 + THE1B LTR MaLR 1 364 0 2157 121 0 0 chr2 127339696 127339999 -123347855 - AluSx SINE Alu 0 303 1 2725 176 55 14 chr2 127541477 127542189 -123145665 - L1PA16 LINE L1 0 6166 5401 210 143 0 0 chr2 127543568 127543603 -123144251 + (CCA)n Simple_repeat Simple_repeat 1 35 0 479 302 35 12 chr2 127543616 127543788 -123144066 - MIR SINE MIR -6 256 81 185 320 70 30 chr2 127544231 127544331 -123143523 - MIR SINE MIR -82 126 23 35 0 0 0 chr2 127544467 127544502 -123143352 + AT_rich Low_complexity Low_complexity 1 35 0 185 65 32 0 chr2 127545600 127545631 -123142223 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1663 116 9 0 chr2 127545641 127545866 -123141988 + AluSq SINE Alu 49 275 -38 183 42 0 0 chr2 127545875 127545899 -123141955 + (GGA)n Simple_repeat Simple_repeat 1 24 0 26745 62 3 1 chr2 127546635 127550226 -123137628 + L1P LINE L1 2 3602 -2544 245 261 0 0 chr2 127550226 127550295 -123137559 + MER94 DNA DNA 66 134 0 440 325 131 29 chr2 127550296 127550766 -123137088 + L2 LINE L2 2708 3232 -81 512 200 7 0 chr2 127550963 127551098 -123136756 + (TA)n Simple_repeat Simple_repeat 2 137 0 223 199 106 159 chr2 127551709 127551860 -123135994 - MIR SINE MIR -45 217 75 200 356 17 0 chr2 127553904 127553963 -123133891 + L3b LINE CR1 1506 1565 -18 1270 224 40 50 chr2 127553964 127554361 -123133493 - MLT2C1 LTR ERVL -4 393 1 1332 248 34 12 chr2 127554507 127554762 -123133092 + L1MD2 LINE L1 5710 5979 -380 2260 92 7 3 chr2 127554762 127555057 -123132797 + AluSx SINE Alu 1 296 -16 1332 248 34 12 chr2 127555057 127555216 -123132638 + L1MD2 LINE L1 5979 6133 -226 246 197 16 0 chr2 127555226 127555287 -123132567 + L1MD3 LINE L1 7926 7987 -8 335 269 35 46 chr2 127556064 127556261 -123131593 + L1MCb LINE L1 169 363 -5682 267 235 0 0 chr2 127556350 127556401 -123131453 + L2 LINE L2 3214 3264 -8 7459 38 2 5 chr2 127557602 127558769 -123129085 - L1PA5 LINE L1 -1 6153 4988 1512 165 61 29 chr2 127558925 127559270 -123128584 + THE1C LTR MaLR 1 356 -19 281 367 0 37 chr2 127559407 127559516 -123128338 - L3 LINE CR1 -92 1485 1381 273 216 0 0 chr2 127559932 127560020 -123127834 + T-rich Low_complexity Low_complexity 1 88 0 263 260 52 0 chr2 127560492 127560569 -123127285 - MIR SINE MIR -80 182 102 2381 95 3 0 chr2 127560743 127561049 -123126805 + AluSc SINE Alu 1 307 -2 221 300 33 67 chr2 127561159 127561279 -123126575 - MIR SINE MIR -92 170 55 208 125 89 0 chr2 127562181 127562237 -123125617 + (TA)n Simple_repeat Simple_repeat 1 61 0 2063 228 82 21 chr2 127562526 127562588 -123125266 - MLT1E1 LTR MaLR -2 641 584 1552 211 38 0 chr2 127562588 127562877 -123124977 + AluJo SINE Alu 2 301 -11 2063 228 82 21 chr2 127562877 127563426 -123124428 - MLT1E1 LTR MaLR -59 584 1 326 263 124 70 chr2 127563448 127563536 -123124318 - L2 LINE L2 -18 3295 3213 1918 161 38 58 chr2 127563536 127563934 -123123920 + MLT1B LTR MaLR 1 390 0 326 263 124 70 chr2 127563934 127564031 -123123823 - L2 LINE L2 -100 3213 3100 403 207 0 0 chr2 127564778 127564865 -123122989 - L1MB7 LINE L1 -15 6169 6083 294 207 0 0 chr2 127565118 127565176 -123122678 + L2 LINE L2 3256 3313 0 23 68 0 0 chr2 127566063 127566107 -123121747 + AT_rich Low_complexity Low_complexity 1 44 0 2369 173 136 70 chr2 127566122 127566955 -123120899 + L1MC3 LINE L1 6885 7772 -13 279 318 25 38 chr2 127566980 127567216 -123120638 - L1M4 LINE L1 -954 5192 4960 25 0 0 0 chr2 127568030 127568055 -123119799 + AT_rich Low_complexity Low_complexity 1 25 0 601 306 105 25 chr2 127568838 127569201 -123118653 + L2 LINE L2 2921 3312 -1 4318 23 8 0 chr2 127569266 127569831 -123118023 + L1PA3 LINE L1 5603 6171 0 261 139 0 0 chr2 127569995 127570038 -123117816 + (TG)n Simple_repeat Simple_repeat 2 44 0 351 273 36 65 chr2 127571039 127571159 -123116695 + HAL1 LINE L1 1176 1298 -1209 2201 114 3 0 chr2 127571159 127571457 -123116397 + AluSg SINE Alu 1 299 -11 351 273 36 65 chr2 127571457 127571499 -123116355 + HAL1 LINE L1 1298 1340 -1167 893 224 30 104 chr2 127571499 127571865 -123115989 - MER58B DNA MER1_type 0 341 3 351 273 36 65 chr2 127571865 127571979 -123115875 + HAL1 LINE L1 1340 1445 -1062 2024 82 0 11 chr2 127572155 127572436 -123115418 - L1PA8 LINE L1 0 6172 5895 250 219 41 0 chr2 127572489 127572562 -123115292 + L1M4 LINE L1 4631 4706 -1440 2370 185 44 24 chr2 127572601 127573147 -123114707 + MER89 LTR ERV1 1 557 -2 689 179 67 22 chr2 127573682 127573861 -123113993 - MER53 DNA DNA -2 187 1 1498 204 30 13 chr2 127573919 127574218 -123113636 - AluJo SINE Alu -8 304 1 255 304 196 20 chr2 127574524 127574820 -123113034 + L1ME2 LINE L1 239 586 -5619 326 256 98 8 chr2 127574996 127575129 -123112725 + L1ME2 LINE L1 1550 1694 -4702 1564 254 42 4 chr2 127575129 127575677 -123112177 + L1ME2 LINE L1 2480 3048 -3167 1287 227 125 46 chr2 127575776 127576021 -123111833 + L1ME2 LINE L1 5463 5687 -546 6832 71 11 0 chr2 127576021 127577071 -123110783 + L1PA8 LINE L1 5105 6165 -7 1287 227 125 46 chr2 127577071 127577451 -123110403 + L1ME2 LINE L1 5687 6137 -96 676 319 44 16 chr2 127577826 127578074 -123109780 - MIR SINE MIR 0 262 8 583 212 18 47 chr2 127578087 127578257 -123109597 - MER3 DNA MER1_type -7 202 38 387 0 0 0 chr2 127578770 127578813 -123109041 + (TG)n Simple_repeat Simple_repeat 2 44 0 1540 265 40 23 chr2 127579262 127579862 -123107992 + L1MEc LINE L1 572 1181 -5426 300 314 44 27 chr2 127579855 127580137 -123107717 + L1MEc LINE L1 1466 1847 -4629 * 936 26 0 0 chr2 127580761 127580874 -123106980 - L1PA4 LINE L1 -7 6148 6036 269 305 52 35 chr2 127580880 127581061 -123106793 - MIR3 SINE MIR -60 148 11 297 75 0 0 chr2 127581254 127581294 -123106560 + (CA)n Simple_repeat Simple_repeat 2 41 0 307 256 64 48 chr2 127581977 127582102 -123105752 - L2 LINE L2 0 3313 3187 233 272 12 37 chr2 127582542 127582623 -123105231 + C-rich Low_complexity Low_complexity 3 81 0 283 159 6 77 chr2 127582627 127582809 -123105045 + CT-rich Low_complexity Low_complexity 3 171 0 224 344 0 0 chr2 127583006 127583096 -123104758 + CT-rich Low_complexity Low_complexity 2 91 0 493 260 18 18 chr2 127583147 127583316 -123104538 - L1MC4 LINE L1 -186 7856 7688 290 265 20 10 chr2 127583509 127583611 -123104243 - L1MC4a LINE L1 -450 7358 7256 839 244 150 13 chr2 127583636 127584103 -123103751 - L1MC4 LINE L1 -796 7246 6716 1651 122 8 20 chr2 127584345 127584592 -123103262 + AluSg/x SINE Alu 66 309 -3 563 113 19 19 chr2 127584836 127584942 -123102912 - AluYb8 SINE Alu -212 106 1 1359 283 48 14 chr2 127585088 127585647 -123102207 - L1MC4 LINE L1 -1927 5881 5304 214 288 68 0 chr2 127586162 127586221 -123101633 + L2 LINE L2 3246 3308 -5 191 103 26 0 chr2 127586922 127586961 -123100893 + A-rich Low_complexity Low_complexity 5 44 0 188 272 152 22 chr2 127587527 127587612 -123100242 + L2 LINE L2 3165 3261 -11 672 250 83 0 chr2 127587612 127587780 -123100074 + MER5A DNA MER1_type 2 183 -6 1418 159 227 14 chr2 127588381 127588746 -123099108 - MLT1C LTR MaLR -24 443 1 479 282 107 17 chr2 127589157 127589391 -123098463 + MIR SINE MIR 8 262 0 217 321 149 19 chr2 127589598 127589813 -123098041 - MIR SINE MIR 0 262 20 480 289 12 6 chr2 127590465 127590631 -123097223 - MER117 DNA MER1_type -29 168 2 281 261 0 140 chr2 127590894 127591051 -123096803 + MER5B DNA MER1_type 44 178 0 216 0 0 0 chr2 127591509 127591533 -123096321 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 198 348 101 45 chr2 127592638 127592885 -123094969 - L2 LINE L2 -86 3186 2926 589 315 61 29 chr2 127594260 127594635 -123093219 + MLT1J2 LTR MaLR 42 428 -22 493 295 130 32 chr2 127594643 127595043 -123092811 + LTR33 LTR ERVL 1 439 -82 186 214 36 18 chr2 127595264 127595320 -123092534 - MIR SINE MIR -62 146 90 241 293 71 10 chr2 127596080 127596179 -123091675 + L2 LINE L2 3155 3259 -13 198 0 0 0 chr2 127596688 127596710 -123091144 + (TG)n Simple_repeat Simple_repeat 1 22 0 435 19 0 0 chr2 127596969 127597021 -123090833 + (GA)n Simple_repeat Simple_repeat 2 53 0 217 349 61 8 chr2 127597067 127597199 -123090655 - MIR3 SINE MIR -13 195 57 994 259 98 5 chr2 127597202 127597612 -123090242 - L1M4 LINE L1 -1538 4608 4161 214 255 0 0 chr2 127597975 127598022 -123089832 + CT-rich Low_complexity Low_complexity 1 47 0 740 308 80 11 chr2 127598355 127598728 -123089126 - LTR33A LTR ERVL 0 523 125 444 278 36 29 chr2 127599223 127599500 -123088354 + L1M4 LINE L1 4741 5019 -1127 21 0 0 0 chr2 127599576 127599597 -123088257 + AT_rich Low_complexity Low_complexity 1 21 0 403 282 54 32 chr2 127599695 127600095 -123087759 + L1M2 LINE L1 5265 5681 -490 2840 16 0 0 chr2 127600878 127601191 -123086663 - AluYb8 SINE Alu -5 313 1 323 250 9 107 chr2 127601307 127601419 -123086435 + MIR SINE MIR 97 197 -65 189 0 0 0 chr2 127601707 127601728 -123086126 + (A)n Simple_repeat Simple_repeat 1 21 0 1833 122 0 11 chr2 127602467 127602745 -123085109 - AluSg SINE Alu -1 309 35 195 333 42 0 chr2 127603621 127603693 -123084161 - MIR SINE MIR -91 171 97 253 377 45 26 chr2 127604107 127604261 -123083593 - MIR SINE MIR -36 172 16 319 272 42 23 chr2 127605028 127605167 -123082687 + MIR SINE MIR 11 147 -61 3815 236 34 20 chr2 127605260 127606684 -123081170 - L1MD1 LINE L1 0 6242 4776 2924 143 12 95 chr2 127606684 127606835 -123081019 + LTR26 LTR ERV1 1 163 -440 1919 128 39 23 chr2 127606835 127607140 -123080714 + AluSx SINE Alu 1 310 -2 2924 143 12 95 chr2 127607140 127607643 -123080211 + LTR26 LTR ERV1 163 601 -2 3815 236 34 20 chr2 127607643 127608386 -123079468 - L1MD1 LINE L1 -1466 4776 4045 1666 223 39 24 chr2 127608750 127609208 -123078646 + MLT1C LTR MaLR 1 465 -2 1326 131 83 128 chr2 127609940 127610115 -123077739 - AluJo SINE Alu -9 303 122 546 91 0 0 chr2 127610115 127610192 -123077662 + (TG)n Simple_repeat Simple_repeat 2 78 0 1326 131 83 128 chr2 127610192 127610209 -123077645 - AluJo SINE Alu -190 122 106 1988 109 0 8 chr2 127610209 127610474 -123077380 - AluSx SINE Alu -14 298 36 1326 131 83 128 chr2 127610474 127610592 -123077262 - AluJo SINE Alu -206 106 6 228 329 14 0 chr2 127610876 127610946 -123076908 + MER5A DNA MER1_type 27 97 -92 212 343 14 84 chr2 127610883 127611026 -123076828 - MER5A DNA MER1_type -22 167 35 * 1962 174 90 47 chr2 127611105 127611570 -123076284 - MER31A LTR ERV1 0 485 1 236 333 17 125 chr2 127613113 127613353 -123074501 + L2 LINE L2 2836 3049 -223 301 221 29 0 chr2 127613508 127613576 -123074278 - L2 LINE L2 -563 2751 2682 1184 170 4 20 chr2 127614157 127614404 -123073450 + L1MA5 LINE L1 6058 6300 0 22 0 0 0 chr2 127614560 127614582 -123073272 + AT_rich Low_complexity Low_complexity 1 22 0 273 308 0 13 chr2 127614603 127614681 -123073173 - MIR SINE MIR -121 141 65 595 85 0 11 chr2 127615276 127615370 -123072484 + L1PA13 LINE L1 6071 6163 0 2220 99 13 0 chr2 127615375 127615679 -123072175 + AluSp SINE Alu 1 308 -5 960 26 16 84 chr2 127615683 127615874 -123071980 + (GGAAA)n Simple_repeat Simple_repeat 3 180 0 260 313 0 0 chr2 127615876 127615972 -123071882 + L1MC/D LINE L1 5695 5790 -2018 316 328 18 23 chr2 127616120 127616291 -123071563 + HAL1b LINE L1 1179 1348 0 330 193 0 68 chr2 127616357 127616445 -123071409 + L1MB7 LINE L1 16 97 -6445 21 57 0 0 chr2 127616478 127616513 -123071341 + AT_rich Low_complexity Low_complexity 1 35 0 4762 166 16 16 chr2 127616520 127617499 -123070355 - L1MA8 LINE L1 -30 6261 5283 2679 220 57 93 chr2 127617495 127618543 -123069311 + L1MB7 LINE L1 81 1091 -5451 * 3768 211 50 43 chr2 127618564 127620661 -123067193 + L1MB7 LINE L1 4565 6675 -7 197 289 26 13 chr2 127621976 127622052 -123065802 - MIR SINE MIR -101 107 31 398 378 36 0 chr2 127622823 127623016 -123064838 + MIR SINE MIR 63 262 0 183 414 40 40 chr2 127624201 127624479 -123063375 + L2 LINE L2 2995 3272 0 285 198 198 21 chr2 127625034 127625130 -123062724 + MIR SINE MIR 74 186 -76 219 111 0 44 chr2 127625750 127625795 -123062059 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 206 236 36 18 chr2 127626095 127626150 -123061704 - L2 LINE L2 -24 3248 3193 621 305 60 0 chr2 127626161 127626394 -123061460 + MIR SINE MIR 15 261 -1 926 147 0 11 chr2 127627198 127627375 -123060479 + (GGGA)n Simple_repeat Simple_repeat 3 177 0 203 200 25 0 chr2 127627376 127627416 -123060438 + GA-rich Low_complexity Low_complexity 2 42 0 355 128 23 0 chr2 127627698 127627784 -123060070 + (TA)n Simple_repeat Simple_repeat 1 88 0 260 291 114 57 chr2 127628364 127628539 -123059315 - MIR SINE MIR -44 218 34 724 263 24 16 chr2 127630162 127630413 -123057441 - L1ME3 LINE L1 0 6162 5910 288 242 137 0 chr2 127631163 127631287 -123056567 - MLT1H1 LTR MaLR -8 547 407 14311 141 24 2 chr2 127631613 127633978 -123053876 + Tigger1 DNA MER2_type 2 2417 -1 37 39 0 0 chr2 127634679 127634730 -123053124 + AT_rich Low_complexity Low_complexity 1 51 0 243 202 70 35 chr2 127635015 127635129 -123052725 - Charlie7 DNA MER1_type -6 2606 2489 1785 176 70 13 chr2 127635520 127635917 -123051937 + MSTB1 LTR MaLR 2 421 -11 592 223 0 8 chr2 127635999 127636120 -123051734 + FLAM_A SINE Alu 1 120 -13 23 0 0 0 chr2 127636126 127636149 -123051705 + AT_rich Low_complexity Low_complexity 1 23 0 596 248 133 73 chr2 127636731 127636794 -123051060 + L1MC3 LINE L1 27 85 -5960 2041 72 49 0 chr2 127636794 127637058 -123050796 + AluSg SINE Alu 27 303 -7 596 248 133 73 chr2 127637058 127637280 -123050574 + L1MC3 LINE L1 85 258 -5787 1609 284 59 20 chr2 127637312 127637904 -123049950 - MER21B LTR ERV1 -52 811 197 246 94 0 0 chr2 127638021 127638053 -123049801 - MER21B LTR ERV1 -777 86 55 979 274 20 49 chr2 127638134 127638542 -123049312 + L1MC3 LINE L1 256 651 -5394 1686 270 35 14 chr2 127638542 127638887 -123048967 - LTR53 LTR ERVL 0 519 158 2302 169 30 2 chr2 127638887 127639284 -123048570 - LTR57 LTR ERVL 0 411 4 1686 270 35 14 chr2 127639284 127639446 -123048408 - LTR53 LTR ERVL -361 158 1 1938 246 54 31 chr2 127639448 127640532 -123047322 + L1MC3 LINE L1 649 1764 -4800 * 3470 153 23 65 chr2 127640529 127641299 -123046555 + L1MCa LINE L1 280 1017 -5409 2732 250 58 43 chr2 127641287 127642621 -123045233 + L1MCa LINE L1 2346 3700 -2726 * 2558 256 60 21 chr2 127642644 127643553 -123044301 + L1MCa LINE L1 3786 4730 -1696 5420 230 32 55 chr2 127643632 127644344 -123043510 + L1MC3 LINE L1 4068 4795 -1769 2279 121 0 0 chr2 127644344 127644649 -123043205 + AluSg SINE Alu 1 305 -5 5420 230 32 55 chr2 127644649 127644783 -123043071 + L1MC3 LINE L1 4795 4931 -1633 4578 46 4 0 chr2 127644783 127645343 -123042511 - L1PA7 LINE L1 -6 6148 5587 1854 113 30 8 chr2 127645343 127645608 -123042246 - AluSx SINE Alu -41 271 1 5420 230 32 55 chr2 127645608 127647986 -123039868 + L1MC3 LINE L1 4929 5818 -746 1093 204 201 30 chr2 127648013 127648351 -123039503 - MSTD LTR MaLR 0 396 1 2621 166 140 132 chr2 127648351 127648616 -123039238 + L1MC3 LINE L1 7212 7473 -730 326 261 11 11 chr2 127648616 127648704 -123039150 + MLT1F1 LTR MaLR 24 111 -456 2621 166 140 132 chr2 127648704 127649327 -123038527 + L1MC3 LINE L1 7473 8195 -8 339 213 16 25 chr2 127649338 127649460 -123038394 + GA-rich Low_complexity Low_complexity 2 122 0 1882 182 81 20 chr2 127650070 127650476 -123037378 - MSTB1 LTR MaLR -1 431 1 195 129 0 0 chr2 127650601 127650632 -123037222 + (CAT)n Simple_repeat Simple_repeat 3 33 0 220 231 19 0 chr2 127650953 127651005 -123036849 - MIR SINE MIR -113 149 97 287 317 16 0 chr2 127651023 127651146 -123036708 + (TA)n Simple_repeat Simple_repeat 2 126 0 2117 169 50 10 chr2 127651178 127651575 -123036279 + HSMAR2 DNA Mariner 10 422 -880 2278 148 65 30 chr2 127651575 127652080 -123035774 - MLT2A2 LTR ERVL 0 554 3 5052 134 55 6 chr2 127652084 127652924 -123034930 + HSMAR2 DNA Mariner 420 1300 -2 496 269 123 26 chr2 127654391 127654618 -123033236 + MIR SINE MIR 2 250 -12 21 0 0 0 chr2 127655868 127655889 -123031965 + AT_rich Low_complexity Low_complexity 1 21 0 550 287 73 47 chr2 127655902 127656639 -123031215 - L1ME3A LINE L1 -246 5993 5238 2340 91 0 3 chr2 127656643 127656939 -123030915 - AluSg SINE Alu -9 301 7 207 0 0 0 chr2 127656943 127656966 -123030888 + (T)n Simple_repeat Simple_repeat 1 23 0 2702 197 29 39 chr2 127657045 127657695 -123030159 - L1MB2 LINE L1 -2 6169 5526 1031 241 48 40 chr2 127657695 127658093 -123029761 - MLT1C LTR MaLR -66 401 1 290 302 161 26 chr2 127658121 127658469 -123029385 - L1ME3A LINE L1 -1804 4411 4017 233 265 27 68 chr2 127658495 127658642 -123029212 - L1ME3A LINE L1 -2154 4061 3921 3266 127 84 100 chr2 127658660 127659458 -123028396 - LTR1 LTR ERV1 0 785 1 2333 56 0 0 chr2 127659515 127659827 -123028027 + AluY SINE Alu 1 312 0 429 235 89 53 chr2 127659921 127660168 -123027686 - L1ME3A LINE L1 -3142 3073 2818 237 159 0 0 chr2 127660293 127660337 -123027517 + T-rich Low_complexity Low_complexity 1 44 0 343 337 92 71 chr2 127660558 127661499 -123026355 - L1ME3A LINE L1 -3949 2447 1487 246 174 0 0 chr2 127662202 127662248 -123025606 + (CA)n Simple_repeat Simple_repeat 2 47 0 183 129 0 0 chr2 127662900 127662931 -123024923 + (TC)n Simple_repeat Simple_repeat 2 32 0 290 290 21 0 chr2 127663636 127663729 -123024125 + MER5A DNA MER1_type 3 97 -92 329 327 74 19 chr2 127664653 127664815 -123023039 + L2 LINE L2 3143 3313 0 2054 129 0 23 chr2 127664893 127665196 -123022658 - AluSx SINE Alu -14 298 3 2216 77 31 0 chr2 127666154 127666440 -123021414 - AluY SINE Alu -16 295 1 280 271 0 0 chr2 127666686 127666756 -123021098 + L2 LINE L2 3240 3309 -4 210 269 0 0 chr2 127667582 127667634 -123020220 + CT-rich Low_complexity Low_complexity 1 52 0 234 299 66 7 chr2 127667755 127667892 -123019962 + MIR SINE MIR 118 262 0 318 87 0 0 chr2 127668091 127668137 -123019717 + (TG)n Simple_repeat Simple_repeat 2 47 0 356 323 60 51 chr2 127668220 127668536 -123019318 - MLT1G LTR MaLR -199 391 73 2099 206 70 104 chr2 127668544 127669263 -123018591 - LTR8A LTR ERV1 0 727 34 362 316 113 8 chr2 127669339 127669472 -123018382 - MIR SINE MIR -110 152 6 470 287 6 43 chr2 127669494 127669658 -123018196 + MIR3 SINE MIR 36 193 -15 766 290 169 8 chr2 127669764 127670130 -123017724 + LTR16A LTR ERVL 18 442 -8 475 271 41 29 chr2 127670720 127670890 -123016964 + MER5B DNA MER1_type 1 172 -6 363 299 50 118 chr2 127671020 127671341 -123016513 - L2 LINE L2 -12 3260 2962 2312 110 0 0 chr2 127671353 127671661 -123016193 - AluSg SINE Alu -2 308 1 378 310 97 7 chr2 127671990 127672145 -123015709 - MIR SINE MIR -51 211 43 236 373 85 0 chr2 127672492 127672610 -123015244 - MIR SINE MIR -82 180 53 239 274 0 0 chr2 127673475 127673548 -123014306 + L1MCc LINE L1 1396 1468 -4955 1140 279 59 48 chr2 127673628 127674172 -123013682 + L1MEc LINE L1 205 754 -5809 2372 211 25 12 chr2 127674205 127674694 -123013160 - MER70B LTR ERVL -82 496 2 260 269 15 0 chr2 127674695 127674762 -123013092 + L1MEc LINE L1 749 816 -5747 * 666 238 77 14 chr2 127674739 127674979 -123012875 + L1ME2 LINE L1 5948 6144 -256 238 387 54 24 chr2 127676023 127676191 -123011663 - MIR3 SINE MIR -4 204 32 1583 98 128 19 chr2 127676770 127677036 -123010818 - AluSg SINE Alu -15 295 1 200 307 0 67 chr2 127677438 127677513 -123010341 - L2 LINE L2 -60 3212 3143 557 182 0 0 chr2 127678164 127678263 -123009591 - MER5A DNA MER1_type -87 102 4 268 247 240 20 chr2 127680616 127680762 -123007092 - MIR SINE MIR -6 256 79 761 182 31 6 chr2 127680844 127681003 -123006851 + MER3 DNA MER1_type 1 163 -46 1497 194 4 4 chr2 127681009 127681272 -123006582 - AluJo SINE Alu -45 267 5 4732 265 85 23 chr2 127681502 127684296 -123003558 + L1MEc LINE L1 1375 4468 -1914 1354 192 19 108 chr2 127684296 127684724 -123003130 - MLT1B LTR MaLR 0 390 1 4732 265 85 23 chr2 127684724 127684851 -123003003 + L1MEc LINE L1 4468 4586 -1796 * 12284 209 48 15 chr2 127684849 127691077 -122996777 + L1PA16 LINE L1 102 6216 -653 2136 145 0 0 chr2 127691077 127691374 -122996480 + AluSq SINE Alu 1 297 -16 12284 209 48 15 chr2 127691374 127692048 -122995806 + L1PA16 LINE L1 6216 6866 -3 3801 193 28 29 chr2 127692077 127692848 -122995006 + L1MB8 LINE L1 4678 5448 -966 2392 93 0 3 chr2 127692848 127693161 -122994693 + AluSx SINE Alu 1 312 0 3801 193 28 29 chr2 127693161 127694127 -122993727 + L1MB8 LINE L1 5448 6409 -5 299 326 23 8 chr2 127694412 127694541 -122993313 + MIR SINE MIR 129 259 -3 2103 126 0 3 chr2 127695069 127695363 -122992491 - AluSx SINE Alu -19 293 1 230 341 119 32 chr2 127695670 127695796 -122992058 + L2 LINE L2 3125 3261 -11 208 333 14 0 chr2 127696122 127696191 -122991663 + L2 LINE L2 3239 3308 -5 1510 253 56 10 chr2 127696228 127696803 -122991051 + MLT2F LTR ERVL 17 663 0 6029 154 42 4 chr2 127697928 127699104 -122988750 - Tigger3b DNA MER2_type -10 1221 1 1860 151 3 52 chr2 127699124 127699449 -122988405 + AluJb SINE Alu 2 310 -2 247 267 238 20 chr2 127699504 127699605 -122988249 - MER5B DNA MER1_type 0 178 56 1602 249 106 84 chr2 127699610 127700797 -122987057 + L1ME2 LINE L1 2545 3704 -2442 252 196 0 0 chr2 127700797 127700843 -122987011 + Tigger5 DNA MER2_type 2278 2323 0 1602 249 106 84 chr2 127700843 127700960 -122986894 + L1ME2 LINE L1 3704 3817 -2329 2585 195 30 7 chr2 127700960 127701524 -122986330 + L1MB1 LINE L1 5590 6166 -2 1602 249 106 84 chr2 127701524 127701990 -122985864 + L1ME2 LINE L1 3817 4401 -1745 3404 176 17 23 chr2 127702001 127702702 -122985152 + L1MB3 LINE L1 5445 6141 -42 2641 175 23 2 chr2 127702701 127703272 -122984582 - L1 LINE L1 -1359 4787 4205 * 3640 133 12 57 chr2 127703273 127703952 -122983902 + L1PB4 LINE L1 5508 6155 -1 449 280 69 26 chr2 127703988 127704177 -122983677 + L1ME2 LINE L1 4382 4578 -1568 433 250 17 42 chr2 127704180 127704300 -122983554 + MER58 DNA MER1_type 2 118 -2302 2234 243 42 67 chr2 127704445 127704568 -122983286 + L1ME2 LINE L1 4614 4739 -1425 2233 76 7 14 chr2 127704568 127704857 -122982997 + AluSg SINE Alu 1 287 -23 2234 243 42 67 chr2 127704857 127706295 -122981559 + L1ME2 LINE L1 4739 6133 -31 228 363 13 38 chr2 127706871 127707028 -122980826 - L2 LINE L2 0 3313 3161 499 245 20 0 chr2 127708146 127708248 -122979606 + MER5B DNA MER1_type 75 178 0 1537 204 102 48 chr2 127708317 127708798 -122979056 + MLT2B1 LTR ERVL 1 414 0 222 333 108 0 chr2 127708803 127708905 -122978949 - MER5B DNA MER1_type -58 120 8 218 294 96 66 chr2 127708915 127709051 -122978803 + MIR SINE MIR 79 218 -44 801 214 13 65 chr2 127709149 127709378 -122978476 - AluJb SINE Alu -13 299 83 259 310 62 39 chr2 127710534 127710663 -122977191 + MIR SINE MIR 99 230 -32 254 347 40 40 chr2 127710725 127710875 -122976979 - L3 LINE CR1 -23 1554 1405 615 253 72 0 chr2 127710982 127711148 -122976706 + MIR SINE MIR 3 180 -82 218 220 0 176 chr2 127711363 127711454 -122976400 - MIR SINE MIR -57 151 77 207 139 0 0 chr2 127712059 127712095 -122975759 + (TTA)n Simple_repeat Simple_repeat 1 36 0 26 30 0 0 chr2 127712247 127712280 -122975574 + AT_rich Low_complexity Low_complexity 1 33 0 1174 170 71 50 chr2 127712646 127712929 -122974925 + L1MB5 LINE L1 5879 6167 -7 220 275 50 0 chr2 127713021 127713101 -122974753 + MIR SINE MIR 40 123 -139 444 305 103 17 chr2 127713675 127713849 -122974005 - MIR SINE MIR -17 245 57 440 306 61 68 chr2 127714309 127714734 -122973120 - MLT1L LTR MaLR 0 615 194 270 361 113 0 chr2 127717143 127717276 -122970578 + MER5A DNA MER1_type 2 149 -40 1688 189 124 14 chr2 127717281 127717716 -122970138 - MLT1D LTR MaLR 0 505 23 358 278 78 50 chr2 127718369 127718751 -122969103 - L1MCa LINE L1 -4849 1577 1185 226 270 16 0 chr2 127718752 127718815 -122969039 + MER5B DNA MER1_type 115 178 0 1123 240 46 25 chr2 127719990 127720356 -122967498 - MER87 LTR ERV1 0 541 168 1915 229 25 6 chr2 127721490 127722014 -122965840 + L1M4 LINE L1 4738 5271 -875 726 99 9 0 chr2 127722049 127722160 -122965694 - L1PA15 LINE L1 0 6165 6054 2379 150 174 37 chr2 127722183 127722723 -122965131 - LTR18B LTR ERVL 0 614 1 6560 158 32 3 chr2 127722877 127724012 -122963842 - HERVL18 LTR ERVL 0 6047 4880 2358 154 0 34 chr2 127724005 127724415 -122963439 - HERVL18 LTR ERVL -4834 1213 818 * 1604 207 3 6 chr2 127724395 127724709 -122963145 + HERVL18 LTR ERVL 5735 6047 0 * 1778 179 30 37 chr2 127724863 127725406 -122962448 + LTR18B LTR ERVL 1 587 -27 11943 171 20 8 chr2 127725433 127725708 -122962146 - L1PA15 LINE L1 -106 6059 5789 2275 111 0 7 chr2 127725708 127726015 -122961839 - AluSc SINE Alu -4 305 1 11943 171 20 8 chr2 127726015 127728975 -122958879 - L1PA15 LINE L1 -376 5789 2788 1267 202 161 73 chr2 127728980 127729539 -122958315 - LTR24C LTR ERV1 -27 608 1 34 55 0 0 chr2 127729580 127729635 -122958219 + AT_rich Low_complexity Low_complexity 1 55 0 235 197 121 0 chr2 127729736 127729802 -122958052 + LTR24 LTR ERV1 369 424 -43 829 215 86 36 chr2 127730465 127730744 -122957110 - LTR19C LTR ERV1 -1 778 486 * 1403 198 14 81 chr2 127730722 127731141 -122956713 - LTR9 LTR ERV1 -221 391 1 244 236 22 22 chr2 127732912 127733001 -122954853 + L1MA10 LINE L1 6243 6331 -3 236 213 31 47 chr2 127733005 127733132 -122954722 + (TTTAA)n Simple_repeat Simple_repeat 3 127 0 2483 92 119 5 chr2 127733132 127733534 -122954320 - LTR7 LTR ERV1 -2 448 1 2841 197 39 44 chr2 127733552 127733814 -122954040 - MER63C DNA MER1_type -270 790 528 523 227 222 0 chr2 127733814 127733990 -122953864 + MER58C DNA MER1_type 1 215 0 873 257 22 14 chr2 127733998 127734220 -122953634 + MER58A DNA MER1_type 1 224 0 2841 197 39 44 chr2 127734220 127734739 -122953115 - MER63C DNA MER1_type -539 521 4 1779 197 52 83 chr2 127735065 127735193 -122952661 - L1MD2 LINE L1 -486 6267 6137 279 0 0 0 chr2 127735193 127735224 -122952630 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1779 197 52 83 chr2 127735224 127736003 -122951851 - L1MD2 LINE L1 -616 6137 5375 1146 237 80 44 chr2 127736028 127736556 -122951298 - L1MD2 LINE L1 -2402 4138 3592 * 2610 237 57 33 chr2 127736554 127737504 -122950350 - L1MD2 LINE L1 -4135 2405 1427 1367 137 31 13 chr2 127737504 127737730 -122950124 + MER30 DNA MER1_type 1 230 0 2610 237 57 33 chr2 127737730 127737811 -122950043 - L1MD2 LINE L1 -5113 1427 1349 1571 165 201 11 chr2 127737918 127738276 -122949578 + MSTA LTR MaLR 3 428 0 6993 148 7 40 chr2 127738278 127739561 -122948293 + THE1C-int LTR MaLR 3 1243 -337 1581 144 161 71 chr2 127739566 127739933 -122947921 - MER4A LTR ERV1 -4 660 261 548 143 10 10 chr2 127739933 127740031 -122947823 - MER4A LTR ERV1 -566 98 1 1939 97 38 38 chr2 127740031 127740371 -122947483 + THE1C-int LTR MaLR 1241 1580 0 1800 142 59 59 chr2 127740372 127740746 -122947108 + THE1C LTR MaLR 2 375 0 784 188 149 16 chr2 127740775 127741030 -122946824 - L1MD2 LINE L1 -5258 1285 997 644 240 26 101 chr2 127741492 127741759 -122946095 - L1MD2 LINE L1 -6155 385 139 815 273 50 12 chr2 127742847 127743089 -122944765 + MLT1G1 LTR MaLR 1 251 -344 217 229 0 21 chr2 127743316 127743364 -122944490 - L2 LINE L2 -9 3263 3217 302 289 40 85 chr2 127743514 127743715 -122944139 + MIR SINE MIR 23 214 -48 764 182 118 11 chr2 127744088 127744275 -122943579 + MER3 DNA MER1_type 2 208 -1 513 252 124 19 chr2 127744278 127744488 -122943366 + MIR SINE MIR 31 262 0 1348 221 54 49 chr2 127744597 127745149 -122942705 + L1MC3 LINE L1 1072 1626 -4800 * 3708 153 23 65 chr2 127745146 127745916 -122941938 + L1MCa LINE L1 280 1017 -5409 2754 249 58 42 chr2 127745904 127747237 -122940617 + L1MCa LINE L1 2346 3700 -2726 * 2524 259 60 21 chr2 127747260 127748169 -122939685 + L1MCa LINE L1 3786 4730 -1696 5404 231 32 55 chr2 127748248 127748960 -122938894 + L1MC3 LINE L1 3930 4657 -1769 2256 125 0 0 chr2 127748960 127749265 -122938589 + AluSg SINE Alu 1 305 -5 5404 231 32 55 chr2 127749265 127749399 -122938455 + L1MC3 LINE L1 4657 4793 -1633 4578 46 4 0 chr2 127749399 127749959 -122937895 - L1PA7 LINE L1 -6 6148 5587 1854 113 30 8 chr2 127749959 127750224 -122937630 - AluSx SINE Alu -41 271 1 5404 231 32 55 chr2 127750224 127752602 -122935252 + L1MC3 LINE L1 4791 5680 -746 1093 204 201 30 chr2 127752629 127752967 -122934887 - MSTD LTR MaLR 0 396 1 2636 165 140 132 chr2 127752967 127753232 -122934622 + L1MC3 LINE L1 7074 7335 -730 326 261 11 11 chr2 127753232 127753320 -122934534 + MLT1F1 LTR MaLR 24 111 -456 2636 165 140 132 chr2 127753320 127753943 -122933911 + L1MC3 LINE L1 7335 8057 -8 333 209 9 26 chr2 127753954 127754069 -122933785 + GA-rich Low_complexity Low_complexity 2 114 0 1882 182 81 20 chr2 127754679 127755085 -122932769 - MSTB1 LTR MaLR -1 431 1 195 129 0 0 chr2 127755210 127755241 -122932613 + (CAT)n Simple_repeat Simple_repeat 3 33 0 220 231 19 0 chr2 127755562 127755614 -122932240 - MIR SINE MIR -113 149 97 287 317 16 0 chr2 127755632 127755755 -122932099 + (TA)n Simple_repeat Simple_repeat 1 125 0 2117 169 50 10 chr2 127755787 127756184 -122931670 + HSMAR2 DNA Mariner 10 422 -880 2278 148 65 30 chr2 127756184 127756689 -122931165 - MLT2A2 LTR ERVL 0 554 3 5052 134 55 6 chr2 127756693 127757533 -122930321 + HSMAR2 DNA Mariner 420 1300 -2 496 269 123 26 chr2 127759000 127759227 -122928627 + MIR SINE MIR 2 250 -12 21 0 0 0 chr2 127760476 127760497 -122927357 + AT_rich Low_complexity Low_complexity 1 21 0 555 284 73 47 chr2 127760510 127761247 -122926607 - L1ME3A LINE L1 -246 5924 5169 2323 92 0 3 chr2 127761251 127761545 -122926309 - AluSg SINE Alu -11 299 7 198 0 0 0 chr2 127761549 127761571 -122926283 + (T)n Simple_repeat Simple_repeat 1 22 0 2702 197 29 39 chr2 127761650 127762300 -122925554 - L1MB2 LINE L1 -2 6169 5526 1028 241 48 40 chr2 127762300 127762698 -122925156 - MLT1C LTR MaLR -66 401 1 290 302 161 26 chr2 127762726 127763074 -122924780 - L1ME3A LINE L1 -1804 4342 3948 233 265 27 68 chr2 127763100 127763247 -122924607 - L1ME3A LINE L1 -2154 3992 3852 3278 124 85 100 chr2 127763265 127764062 -122923792 - LTR1 LTR ERV1 0 785 1 2333 56 0 0 chr2 127764119 127764431 -122923423 + AluY SINE Alu 1 312 0 428 232 102 51 chr2 127764520 127764774 -122923080 - L1ME3A LINE L1 -3131 3015 2749 237 159 0 0 chr2 127764899 127764943 -122922911 + T-rich Low_complexity Low_complexity 1 44 0 25 75 0 0 chr2 127765537 127765590 -122922264 + AT_rich Low_complexity Low_complexity 1 53 0 200 257 0 27 chr2 127765611 127765685 -122922169 + T-rich Low_complexity Low_complexity 3 74 0 27 45 0 45 chr2 127765752 127765819 -122922035 + AT_rich Low_complexity Low_complexity 1 64 0 246 174 0 0 chr2 127766808 127766854 -122921000 + (CA)n Simple_repeat Simple_repeat 2 47 0 183 129 0 0 chr2 127767506 127767537 -122920317 + (TC)n Simple_repeat Simple_repeat 2 32 0 297 280 21 0 chr2 127768242 127768335 -122919519 + MER5A DNA MER1_type 3 97 -92 329 327 74 19 chr2 127769259 127769421 -122918433 + L2 LINE L2 3143 3313 0 2033 134 0 23 chr2 127769499 127769806 -122918048 - AluSx SINE Alu -10 302 3 2220 74 32 0 chr2 127770764 127771049 -122916805 - AluY SINE Alu -17 294 1 364 283 97 35 chr2 127771604 127771749 -122916105 - L2 LINE L2 -16 3256 3103 227 289 0 0 chr2 127771749 127771794 -122916060 + L1MDb LINE L1 21 65 -6344 482 286 14 4 chr2 127771975 127772145 -122915709 + L1M4 LINE L1 3617 3784 -2362 368 242 20 34 chr2 127772136 127772285 -122915569 + L1M4 LINE L1 3729 3875 -2271 * 3451 252 42 47 chr2 127772276 127773881 -122913973 + L1M4 LINE L1 2258 3854 -2292 2123 245 72 7 chr2 127774015 127774835 -122913019 + L1M4 LINE L1 3133 4005 -2141 190 204 23 0 chr2 127774930 127774974 -122912880 + L2 LINE L2 3010 3054 -218 281 188 0 43 chr2 127775646 127775715 -122912139 - MLT2D LTR ERVL 0 414 357 464 106 41 16 chr2 127775716 127775839 -122912015 + (TAGA)n Simple_repeat Simple_repeat 3 128 0 2117 240 65 4 chr2 127775879 127776354 -122911500 - MLT2B3 LTR ERVL -50 504 1 365 253 61 0 chr2 127776506 127776605 -122911249 - MLT1K LTR MaLR -7 581 477 227 374 59 68 chr2 127776792 127777129 -122910725 - MLT1K LTR MaLR -241 347 14 2358 138 13 47 chr2 127777129 127777577 -122910277 + Tigger2a DNA MER2_type 1 433 -1 369 311 88 30 chr2 127777905 127778233 -122909621 + L2 LINE L2 2279 2625 -689 274 310 11 0 chr2 127778227 127778314 -122909540 - MIR SINE MIR -4 258 171 * 329 337 62 12 chr2 127778425 127778615 -122909239 + MER20B DNA MER1_type 1 202 -17 519 344 53 55 chr2 127778797 127779561 -122908293 - L2 LINE L2 0 3313 2552 816 225 51 0 chr2 127779931 127780109 -122907745 + MER5A DNA MER1_type 3 189 0 340 259 0 0 chr2 127780276 127780357 -122907497 + L2 LINE L2 3229 3309 -4 210 269 0 0 chr2 127781183 127781235 -122906619 + CT-rich Low_complexity Low_complexity 1 52 0 234 299 66 7 chr2 127781356 127781493 -122906361 + MIR SINE MIR 118 262 0 318 87 0 0 chr2 127781692 127781738 -122906116 + (TG)n Simple_repeat Simple_repeat 2 47 0 356 323 60 51 chr2 127781821 127782137 -122905717 - MLT1K LTR MaLR -199 391 73 2087 206 70 104 chr2 127782145 127782864 -122904990 - LTR8A LTR ERV1 0 727 34 362 316 113 8 chr2 127782940 127783073 -122904781 - MIR SINE MIR -110 152 6 470 287 6 43 chr2 127783095 127783259 -122904595 + MIR3 SINE MIR 36 193 -15 754 287 172 11 chr2 127783365 127783731 -122904123 + LTR16A LTR ERVL 18 442 -8 475 271 41 29 chr2 127784321 127784491 -122903363 + MER5B DNA MER1_type 1 172 -6 342 299 50 118 chr2 127784621 127784942 -122902912 - L2 LINE L2 -12 3260 2962 2283 114 0 0 chr2 127784954 127785262 -122902592 - AluSg SINE Alu -2 308 1 378 310 97 7 chr2 127785591 127785746 -122902108 - MIR SINE MIR -51 211 43 236 373 85 0 chr2 127786093 127786211 -122901643 - MIR SINE MIR -82 180 53 239 274 0 0 chr2 127787076 127787149 -122900705 + L1MCc LINE L1 1396 1468 -4955 1304 271 56 53 chr2 127787227 127787777 -122900077 + L1MEc LINE L1 203 754 -5809 2359 213 25 12 chr2 127787810 127788299 -122899555 - MER70B LTR ERVL -82 496 2 245 284 15 0 chr2 127788300 127788367 -122899487 + L1MEc LINE L1 749 816 -5747 * 653 242 77 14 chr2 127788344 127788584 -122899270 + L1ME2 LINE L1 5948 6144 -256 241 381 54 24 chr2 127789628 127789796 -122898058 - MIR3 SINE MIR -4 204 32 1621 91 128 19 chr2 127790372 127790637 -122897217 - AluSg SINE Alu -16 294 1 200 307 0 67 chr2 127791039 127791114 -122896740 - L2 LINE L2 -60 3212 3143 557 182 0 0 chr2 127791765 127791864 -122895990 - MER5A DNA MER1_type -87 102 4 270 240 247 27 chr2 127794216 127794362 -122893492 - MIR SINE MIR -6 256 79 761 182 31 6 chr2 127794444 127794603 -122893251 + MER3 DNA MER1_type 1 163 -46 1456 198 4 4 chr2 127794609 127794872 -122892982 - AluJo SINE Alu -45 267 5 4772 265 85 23 chr2 127795102 127797896 -122889958 + L1MEc LINE L1 1375 4468 -1914 1338 194 19 108 chr2 127797896 127798324 -122889530 - MLT1B LTR MaLR 0 390 1 4772 265 85 23 chr2 127798324 127798451 -122889403 + L1MEc LINE L1 4468 4586 -1796 * 12311 209 48 15 chr2 127798449 127804677 -122883177 + L1PA16 LINE L1 102 6216 -653 2120 146 0 0 chr2 127804677 127804972 -122882882 + AluSq SINE Alu 1 295 -18 12311 209 48 15 chr2 127804972 127805646 -122882208 + L1PA16 LINE L1 6216 6866 -3 4069 193 28 29 chr2 127805675 127806446 -122881408 + L1MB8 LINE L1 4678 5448 -966 2386 93 0 3 chr2 127806446 127806758 -122881096 + AluSx SINE Alu 1 311 -1 4069 193 28 29 chr2 127806758 127807724 -122880130 + L1MB8 LINE L1 5448 6409 -5 303 326 23 8 chr2 127808009 127808138 -122879716 + MIR SINE MIR 129 259 -3 2083 126 0 3 chr2 127808666 127808960 -122878894 - AluSx SINE Alu -19 293 1 226 341 119 32 chr2 127809267 127809393 -122878461 + L2 LINE L2 3125 3261 -11 210 333 14 0 chr2 127809719 127809788 -122878066 + L2 LINE L2 3239 3308 -5 1666 253 56 10 chr2 127809825 127810400 -122877454 + MLT2F LTR ERVL 17 663 0 6394 155 42 4 chr2 127811525 127812701 -122875153 - Tigger3b DNA MER2_type -10 1221 1 1808 154 3 52 chr2 127812721 127813046 -122874808 + AluJb SINE Alu 2 310 -2 268 257 238 20 chr2 127813101 127813202 -122874652 - MER5B DNA MER1_type 0 178 56 2044 250 106 84 chr2 127813207 127814394 -122873460 + L1ME2 LINE L1 2545 3704 -2442 269 196 0 0 chr2 127814394 127814440 -122873414 + Tigger5 DNA MER2_type 2278 2323 0 2044 250 106 84 chr2 127814440 127814557 -122873297 + L1ME2 LINE L1 3704 3817 -2329 2601 199 30 7 chr2 127814557 127815121 -122872733 + L1MB1 LINE L1 5590 6166 -2 2044 250 106 84 chr2 127815121 127815587 -122872267 + L1ME2 LINE L1 3817 4401 -1745 3600 177 17 23 chr2 127815598 127816299 -122871555 + L1MB3 LINE L1 5445 6141 -42 2818 173 23 2 chr2 127816298 127816869 -122870985 - L1 LINE L1 -1359 4787 4205 * 3671 133 12 57 chr2 127816870 127817549 -122870305 + L1PB4 LINE L1 5508 6155 -1 449 280 69 26 chr2 127817585 127817774 -122870080 + L1ME2 LINE L1 4382 4578 -1568 470 250 17 42 chr2 127817777 127817897 -122869957 + MER58 DNA MER1_type 2 118 -223 2485 243 39 71 chr2 127818042 127818165 -122869689 + L1ME2 LINE L1 4614 4739 -1425 2223 76 7 14 chr2 127818165 127818454 -122869400 + AluSg SINE Alu 1 287 -23 2485 243 39 71 chr2 127818454 127819913 -122867941 + L1ME2 LINE L1 4739 6141 -23 232 292 0 56 chr2 127820468 127820540 -122867314 - L2 LINE L2 0 3272 3205 497 245 20 0 chr2 127821743 127821845 -122866009 + MER5B DNA MER1_type 75 178 0 1649 224 93 32 chr2 127821914 127822392 -122865462 + MLT2B1 LTR ERVL 1 414 0 222 333 108 0 chr2 127822397 127822499 -122865355 - MER5B DNA MER1_type -58 120 8 221 294 96 66 chr2 127822509 127822645 -122865209 + MIR SINE MIR 79 218 -44 797 220 13 57 chr2 127822743 127822970 -122864884 - AluJb SINE Alu -13 299 83 240 318 62 39 chr2 127824126 127824255 -122863599 + MIR SINE MIR 99 230 -32 250 347 40 40 chr2 127824317 127824467 -122863387 - L3 LINE CR1 -23 1554 1405 609 253 72 0 chr2 127824574 127824740 -122863114 + MIR SINE MIR 3 180 -82 212 220 0 176 chr2 127824955 127825046 -122862808 - MIR SINE MIR -57 151 77 207 139 0 0 chr2 127825651 127825687 -122862167 + (TTA)n Simple_repeat Simple_repeat 1 36 0 26 30 0 0 chr2 127825839 127825872 -122861982 + AT_rich Low_complexity Low_complexity 1 33 0 1265 167 76 49 chr2 127826238 127826526 -122861328 + L1MB5 LINE L1 5879 6174 0 214 275 50 0 chr2 127826613 127826693 -122861161 + MIR SINE MIR 40 123 -139 482 293 103 17 chr2 127827267 127827441 -122860413 - MIR SINE MIR -17 245 57 502 320 32 36 chr2 127827898 127828176 -122859678 - MLT1L LTR MaLR 0 615 339 14167 184 63 10 chr2 127828388 127834426 -122853428 - L1P5 LINE L1 -509 6358 6 242 365 32 0 chr2 127834770 127834896 -122852958 - MIR SINE MIR -37 225 96 1034 205 85 30 chr2 127834907 127835193 -122852661 - LTR40a LTR ERVL 0 494 203 972 239 58 9 chr2 127836511 127836837 -122851017 + L1MDa LINE L1 2082 2423 -4117 884 283 74 40 chr2 127836817 127837344 -122850510 + L1MDa LINE L1 3592 4136 -2404 * 333 309 67 27 chr2 127837360 127837583 -122850271 + L1M4 LINE L1 4970 5201 -945 4189 223 35 2 chr2 127837683 127838700 -122849154 + L1MDa LINE L1 4357 5407 -1133 4419 104 1 1 chr2 127838801 127839463 -122848391 - L1P LINE L1 -4644 1502 841 1121 196 63 43 chr2 127839462 127839809 -122848045 - L1 LINE L1 -1542 4604 4251 * 715 215 33 152 chr2 127839926 127840199 -122847655 - L1MC5 LINE L1 -882 7079 6896 2710 157 20 20 chr2 127840199 127840703 -122847151 - MER84 LTR ERV1 -3 504 1 715 215 33 152 chr2 127840703 127840949 -122846905 - L1MC5 LINE L1 -1065 6896 6622 2836 184 61 38 chr2 127841107 127841758 -122846096 - LTR28 LTR ERV1 -354 666 1 1925 141 3 3 chr2 127843526 127843824 -122844030 + AluSx SINE Alu 3 300 -12 24 0 0 0 chr2 127844230 127844254 -122843600 + AT_rich Low_complexity Low_complexity 1 24 0 2347 144 0 10 chr2 127844300 127844689 -122843165 - L1PB3 LINE L1 -1 6153 5769 2370 149 27 2 chr2 127844689 127845092 -122842762 - L1PA15 LINE L1 0 6165 5746 1438 231 3 3 chr2 127846607 127846918 -122840936 - HERVL18 LTR ERVL 0 6047 5737 * 2333 156 0 34 chr2 127846901 127847311 -122840543 + HERVL18 LTR ERVL 818 1213 -4834 * 2459 145 46 9 chr2 127847304 127847759 -122840095 + HERVL18 LTR ERVL 4880 5351 -696 7333 43 0 0 chr2 127847861 127849188 -122838666 + L1PA3 LINE L1 4819 6144 -11 2451 214 90 16 chr2 127849200 127849958 -122837896 + L1MB5 LINE L1 4600 5413 -744 1565 138 35 67 chr2 127850072 127850413 -122837441 - MER4E LTR ERV1 -87 692 363 2212 94 0 22 chr2 127850453 127850771 -122837083 + AluY SINE Alu 1 311 0 2211 126 0 0 chr2 127850772 127851130 -122836724 - L1PA8A LINE L1 -28 6103 5746 940 156 0 22 chr2 127851230 127851409 -122836445 + L1MB5 LINE L1 5383 5557 -734 634 251 158 57 chr2 127852005 127852428 -122835426 - MLT1H LTR MaLR 0 549 84 233 261 31 0 chr2 127853272 127853337 -122834517 - MLT1L LTR MaLR -359 256 190 757 167 135 0 chr2 127853340 127853496 -122834358 - MER20 DNA MER1_type -7 212 36 358 271 12 0 chr2 127853607 127853692 -122834162 - MER5A DNA MER1_type -2 187 102 209 209 0 176 chr2 127854644 127854735 -122833119 - MIR SINE MIR -57 151 77 207 139 0 0 chr2 127855340 127855376 -122832478 + (TTA)n Simple_repeat Simple_repeat 1 36 0 26 30 0 0 chr2 127855528 127855561 -122832293 + AT_rich Low_complexity Low_complexity 1 33 0 941 198 71 50 chr2 127855927 127856210 -122831644 + L1MB5 LINE L1 5879 6167 -7 188 338 14 0 chr2 127856312 127856383 -122831471 + MIR SINE MIR 52 123 -139 511 262 158 57 chr2 127856810 127857233 -122830621 + MLT1H LTR MaLR 84 549 0 2397 175 77 15 chr2 127857828 127858606 -122829248 - L1M2 LINE L1 -734 5557 4729 501 338 30 0 chr2 127859320 127859518 -122828336 + LTR16A LTR ERVL 240 443 -7 22 35 0 0 chr2 127860625 127860654 -122827200 + AT_rich Low_complexity Low_complexity 1 29 0 412 258 17 42 chr2 127860667 127860787 -122827067 + MER58 DNA MER1_type 2 118 -223 866 239 43 103 chr2 127860932 127861055 -122826799 + L1M4 LINE L1 4614 4743 -1403 2034 98 7 14 chr2 127861055 127861342 -122826512 + AluSg SINE Alu 1 285 -25 866 239 43 103 chr2 127861342 127861899 -122825955 + L1M4 LINE L1 4743 5253 -893 365 334 76 15 chr2 127862059 127862811 -122825043 - L1MEc LINE L1 -4579 1817 1020 2108 136 3 0 chr2 127862945 127862960 -122824894 - AluSx SINE Alu -10 302 289 207 0 0 0 chr2 127862960 127862983 -122824871 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 2108 136 3 0 chr2 127862983 127863268 -122824586 - AluSx SINE Alu -23 289 1 1848 243 62 11 chr2 127864199 127864669 -122823185 - MER74A LTR ERVL -60 498 5 217 325 97 67 chr2 127864730 127865161 -122822693 + L2 LINE L2 2826 3269 -3 4270 77 27 3 chr2 127865729 127866733 -122821121 - MER11A LTR ERVK -7 1259 1 1506 117 0 0 chr2 127866733 127866938 -122820916 + AluSg/x SINE Alu 90 294 -18 1254 243 53 41 chr2 127866938 127867375 -122820479 - LTR9 LTR ERV1 -91 521 80 1221 265 39 42 chr2 127867828 127868371 -122819483 - L1MC4 LINE L1 -11 8031 7491 4618 119 21 3 chr2 127868372 127869084 -122818770 - Tigger1 DNA MER2_type 0 2418 1694 1464 141 8 0 chr2 127869077 127869325 -122818529 - Tigger1 DNA MER2_type -2168 250 1 * 415 226 124 21 chr2 127869398 127869584 -122818270 - L1MC4a LINE L1 -483 7325 7121 559 289 51 28 chr2 127869712 127869965 -122817889 - L1ME1 LINE L1 -6 6160 5902 9660 152 16 53 chr2 127869965 127872023 -122815831 - Tigger1 DNA MER2_type 0 2418 437 4723 63 1 0 chr2 127872123 127872772 -122815082 - L1P LINE L1 -4656 1490 841 1461 162 86 37 chr2 127872771 127873131 -122814723 - L1 LINE L1 -1542 4604 4222 * 291 65 0 48 chr2 127873131 127873193 -122814661 + (TA)n Simple_repeat Simple_repeat 1 59 0 1461 162 86 37 chr2 127873193 127873215 -122814639 - L1 LINE L1 -1924 4222 4203 1348 223 144 7 chr2 127873212 127873621 -122814233 + L1 LINE L1 2255 2719 -3427 * 463 192 23 57 chr2 127873612 127873857 -122813997 + L1 LINE L1 3809 4163 -1983 * 195 100 0 0 chr2 127874053 127874083 -122813771 + (CACCAT)n Simple_repeat Simple_repeat 6 35 0 2035 101 4 4 chr2 127874110 127874377 -122813477 + AluSg1 SINE Alu 1 267 -42 356 151 14 14 chr2 127874722 127874795 -122813059 + AluSg/x SINE Alu 198 270 -32 204 380 9 37 chr2 127875102 127875210 -122812644 - L2 LINE L2 -3 3269 3165 227 333 0 14 chr2 127876489 127876561 -122811293 + MLT1K LTR MaLR 18 88 -500 543 282 58 15 chr2 127876622 127876828 -122811026 + MLT1K LTR MaLR 188 402 -186 393 178 30 20 chr2 127876983 127877084 -122810770 + L1PA15 LINE L1 6056 6157 -8 397 139 70 23 chr2 127877305 127877477 -122810377 + (TA)n Simple_repeat Simple_repeat 1 180 0 222 128 64 0 chr2 127877527 127877621 -122810233 + (TA)n Simple_repeat Simple_repeat 1 100 0 1498 210 51 43 chr2 127878260 127878631 -122809223 + MLT1A2 LTR MaLR 1 374 0 368 218 122 64 chr2 127878633 127878945 -122808909 + L1MEc LINE L1 1389 1718 -4678 601 86 0 0 chr2 127879557 127879650 -122808204 - L1PA8A LINE L1 -330 5801 5709 2457 126 109 9 chr2 127879650 127880080 -122807774 - MER4D LTR ERV1 -427 476 4 258 267 17 0 chr2 127880285 127880366 -122807488 + GA-rich Low_complexity Low_complexity 1 82 0 372 335 87 42 chr2 127880382 127880669 -122807185 + HAL1b LINE L1 357 656 -692 624 292 91 66 chr2 127880805 127881561 -122806293 + L1M4 LINE L1 14 788 -5754 248 328 0 0 chr2 127881720 127881784 -122806070 + polypurine Low_complexity Low_complexity 5 68 0 1581 240 67 114 chr2 127882254 127883097 -122804757 + L1M4 LINE L1 -212 551 -5729 2196 100 7 13 chr2 127883097 127883397 -122804457 + AluSq SINE Alu 1 298 -15 1581 240 67 114 chr2 127883397 127883841 -122804013 + L1M4 LINE L1 551 1014 -5266 2026 107 0 4 chr2 127884731 127885002 -122802852 + AluSg SINE Alu 33 302 -8 396 0 0 0 chr2 127886741 127886785 -122801069 + (TA)n Simple_repeat Simple_repeat 2 45 0 1739 258 58 17 chr2 127886792 127887311 -122800543 - MER74A LTR ERVL -14 544 5 188 299 34 73 chr2 127887364 127887568 -122800286 + L2 LINE L2 2830 3025 -247 219 336 137 8 chr2 127887671 127887802 -122800052 + L2 LINE L2 3122 3269 -3 238 191 0 0 chr2 127888630 127888677 -122799177 + GA-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr2 127888716 127888737 -122799117 + AT_rich Low_complexity Low_complexity 1 21 0 581 273 44 38 chr2 127889468 127889761 -122798093 - L1MC4 LINE L1 -11 8031 7737 326 319 21 0 chr2 127890646 127890740 -122797114 + MER5A DNA MER1_type 10 105 -84 560 249 43 22 chr2 127891415 127891600 -122796254 - MER5A DNA MER1_type 0 189 1 2146 123 0 3 chr2 127891994 127892302 -122795552 + AluSg SINE Alu 1 307 -3 2084 129 14 3 chr2 127892496 127892791 -122795063 - AluSq SINE Alu -15 298 1 400 183 12 0 chr2 127892802 127892884 -122794970 - LTR9 LTR ERV1 -529 83 1 5659 241 75 76 chr2 127892885 127893708 -122794146 + L1M4 LINE L1 1286 2109 -4305 195 42 0 0 chr2 127893708 127893732 -122794122 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5659 241 75 76 chr2 127893732 127897189 -122790665 + L1M4 LINE L1 2109 5673 -741 606 14 0 0 chr2 127897479 127897550 -122790304 + (TG)n Simple_repeat Simple_repeat 1 71 0 246 81 0 0 chr2 127897550 127897587 -122790267 + (GA)n Simple_repeat Simple_repeat 2 38 0 242 290 45 80 chr2 127899645 127899821 -122788033 + MIR3 SINE MIR 32 201 -7 6739 168 18 8 chr2 127900558 127901815 -122786039 - Tigger1 DNA MER2_type -1149 1269 1 8359 207 37 6 chr2 127901817 127903945 -122783909 + L1 LINE L1 3010 5203 -943 4726 156 30 45 chr2 127904059 127905564 -122782290 + L1MA6 LINE L1 4782 6294 -6 1083 236 28 35 chr2 127905583 127905938 -122781916 - L1M4 LINE L1 -3355 2791 2438 2227 110 7 0 chr2 127905938 127906229 -122781625 + AluSp SINE Alu 1 293 -20 1083 236 28 35 chr2 127906229 127906267 -122781587 - L1M4 LINE L1 -3708 2438 2401 946 123 36 55 chr2 127906577 127906796 -122781058 + L1MA9 LINE L1 6081 6295 -17 21 36 0 0 chr2 127906800 127906828 -122781026 + AT_rich Low_complexity Low_complexity 1 28 0 435 323 9 14 chr2 127906931 127907154 -122780700 + HAL1 LINE L1 1501 1722 -785 711 179 135 0 chr2 127907847 127908003 -122779851 - MER20 DNA MER1_type -7 212 36 465 212 12 0 chr2 127908114 127908199 -122779655 - MER5A DNA MER1_type -2 187 102 21 0 0 0 chr2 127909531 127909552 -122778302 + AT_rich Low_complexity Low_complexity 1 21 0 2171 101 0 3 chr2 127909797 127910093 -122777761 - AluSc SINE Alu -14 295 1 680 170 3 5 chr2 127910124 127910275 -122777579 - L1PA8 LINE L1 -10 6162 5996 4216 196 65 12 chr2 127911158 127912149 -122775705 - L1PBa LINE L1 -5815 1048 6 299 346 25 31 chr2 127912493 127912630 -122775224 - MIR SINE MIR -37 225 88 1566 247 61 16 chr2 127912630 127913075 -122774779 - LTR40c LTR ERVL 0 465 1 299 346 25 31 chr2 127913075 127913099 -122774755 - MIR SINE MIR -174 88 65 26 0 0 0 chr2 127913308 127913334 -122774520 + AT_rich Low_complexity Low_complexity 1 26 0 453 200 161 49 chr2 127914481 127914686 -122773168 - MIR SINE MIR -27 235 8 2108 128 0 0 chr2 127915350 127915647 -122772207 - AluSg SINE Alu -13 297 1 1440 170 0 0 chr2 127915647 127915871 -122771983 - AluSx SINE Alu -88 224 1 1038 187 0 5 chr2 127916246 127916533 -122771321 + MER7A DNA MER2_type 2 336 0 2456 198 133 39 chr2 127916849 127917611 -122770243 - LTR28 LTR ERV1 -187 833 1 204 198 57 28 chr2 127917776 127917882 -122769972 + (TA)n Simple_repeat Simple_repeat 1 109 0 408 268 194 48 chr2 127917999 127918350 -122769504 + L1M3d LINE L1 7 408 -6134 473 308 147 33 chr2 127918985 127919165 -122768689 - L1MEc LINE L1 -4132 2264 2106 2248 77 10 10 chr2 127919165 127919477 -122768377 - L1PA8 LINE L1 0 6172 5861 473 308 147 33 chr2 127919477 127919841 -122768013 - L1MEc LINE L1 -4290 2106 1658 505 338 30 0 chr2 127921172 127921370 -122766484 + LTR16A LTR ERVL 240 443 -7 252 205 282 51 chr2 127922493 127922610 -122765244 + L2 LINE L2 3170 3313 0 2023 144 0 26 chr2 127922854 127923166 -122764688 + AluSx SINE Alu 1 304 -8 198 156 0 0 chr2 127923673 127923718 -122764136 + (CA)n Simple_repeat Simple_repeat 2 46 0 30318 33 1 2 chr2 127925027 127928897 -122758957 - L1P LINE L1 -791 5355 1489 188 232 18 18 chr2 127929831 127929887 -122757967 + L2 LINE L2 3258 3313 0 180 404 91 0 chr2 127929998 127930097 -122757757 + MIR SINE MIR 25 132 -76 199 100 0 0 chr2 127930178 127930208 -122757646 + L2 LINE L2 3239 3268 -4 268 276 0 26 chr2 127931722 127931798 -122756056 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 5319 97 1 0 chr2 127932033 127932785 -122755069 + L1PA13 LINE L1 5407 6159 -4 1134 196 6 64 chr2 127932919 127933135 -122754719 - L1MA7 LINE L1 -59 6232 6040 1953 162 7 0 chr2 127933135 127933437 -122754417 - AluSx SINE Alu -8 304 1 1134 196 6 64 chr2 127933437 127933547 -122754307 - L1MA7 LINE L1 -251 6040 5925 * 2715 190 23 6 chr2 127933542 127934539 -122753315 + L1M2 LINE L1 4792 5804 -487 393 331 17 17 chr2 127934901 127935076 -122752778 + L1M3d LINE L1 1350 1524 -5041 * 1999 216 14 62 chr2 127935070 127935176 -122752678 - L1MA9 LINE L1 -164 6148 6038 1710 222 67 5 chr2 127935176 127935380 -122752474 - MSTB LTR MaLR 0 426 236 207 0 0 0 chr2 127935380 127935403 -122752451 + (GA)n Simple_repeat Simple_repeat 2 24 0 1710 222 67 5 chr2 127935403 127935599 -122752255 - MSTB LTR MaLR -190 236 1 1999 216 14 62 chr2 127935599 127936121 -122751733 - L1MA9 LINE L1 -274 6038 5550 1742 244 25 47 chr2 127936238 127936582 -122751272 + L1M4c LINE L1 994 1317 -5067 2388 93 0 0 chr2 127936582 127936873 -122750981 + AluSx SINE Alu 11 301 -11 1742 244 25 47 chr2 127936873 127937233 -122750621 + L1M4c LINE L1 1317 1683 -4701 1868 64 0 38 chr2 127937560 127937826 -122750028 - AluY SINE Alu -15 296 41 243 301 34 48 chr2 127937841 127937987 -122749867 + L1MEd LINE L1 491 634 -5485 185 62 0 31 chr2 127938036 127938068 -122749786 + (TG)n Simple_repeat Simple_repeat 2 32 0 3483 98 4 6 chr2 127938280 127938781 -122749073 + Charlie3 DNA MER1_type 1 500 -2210 3273 86 0 23 chr2 127938776 127939053 -122748801 + Charlie3 DNA MER1_type 2243 2506 -200 * 2845 85 0 3 chr2 127939053 127939418 -122748436 + THE1B LTR MaLR 1 364 0 3273 86 0 23 chr2 127939418 127939615 -122748239 + Charlie3 DNA MER1_type 2506 2706 0 762 270 97 33 chr2 127939654 127940110 -122747744 + L1ME3A LINE L1 5533 6017 -153 2062 128 3 3 chr2 127941060 127941358 -122746496 + AluSx SINE Alu 3 300 -12 21 0 0 0 chr2 127942131 127942152 -122745702 + AT_rich Low_complexity Low_complexity 1 21 0 183 129 0 0 chr2 127942672 127942703 -122745151 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 276 234 148 8 chr2 127943314 127943442 -122744412 - MER69 DNA AcHobo -1 2525 2380 1872 159 26 21 chr2 127943750 127944127 -122743727 - L1MB1 LINE L1 -23 6166 5788 225 157 29 114 chr2 127944716 127944786 -122743068 + MIR SINE MIR 91 154 -108 803 328 131 9 chr2 127945048 127945475 -122742379 + MLT1K LTR MaLR 18 496 -92 347 279 14 71 chr2 127946405 127946545 -122741309 + MIR SINE MIR 80 211 -51 862 96 7 7 chr2 127947452 127947588 -122740266 + (GGAA)n Simple_repeat Simple_repeat 2 137 0 2197 210 82 47 chr2 127947599 127948095 -122739759 - MER21B LTR ERV1 -254 609 89 1734 114 4 0 chr2 127948095 127948332 -122739522 + AluSq SINE Alu 65 302 -11 2197 210 82 47 chr2 127948332 127948410 -122739444 - MER21B LTR ERV1 -774 89 15 400 105 0 0 chr2 127949624 127949681 -122738173 - MER53 DNA DNA -2 187 131 465 208 0 0 chr2 127949703 127949780 -122738074 - MER2 DNA MER2_type 0 345 269 998 187 0 0 chr2 127949808 127949979 -122737875 - MER2 DNA MER2_type -135 210 40 435 286 73 73 chr2 127950093 127950285 -122737569 + MIR SINE MIR 66 257 -5 253 342 35 9 chr2 127951670 127951784 -122736070 - MIR SINE MIR -8 254 138 2219 120 0 7 chr2 127953025 127953333 -122734521 + AluSq SINE Alu 1 306 -7 759 338 42 60 chr2 127953866 127954148 -122733706 - L1MEc LINE L1 -5134 1262 976 1717 115 57 11 chr2 127954148 127954427 -122733427 + AluSg SINE Alu 1 292 -18 759 338 42 60 chr2 127954427 127954464 -122733390 - L1MEc LINE L1 -5420 976 940 911 76 84 30 chr2 127954464 127954595 -122733259 + MER85 DNA T2_type 1 138 -1 759 338 42 60 chr2 127954595 127955387 -122732467 - L1MEc LINE L1 -5456 940 170 224 321 80 18 chr2 127955535 127955647 -122732207 - L2 LINE L2 -969 2345 2227 182 222 16 79 chr2 127956318 127956381 -122731473 - MIR SINE MIR -129 79 21 714 305 62 7 chr2 127956406 127956776 -122731078 + MLT1J1 LTR MaLR 12 444 -2 1333 46 0 0 chr2 127956826 127956978 -122730876 - L1PA10 LINE L1 -4 6164 6013 1776 114 56 9 chr2 127956978 127957270 -122730584 + L1PA10 LINE L1 5671 5934 -234 1357 88 35 0 chr2 127958577 127958748 -122729106 - AluSc SINE Alu -132 177 1 614 260 84 87 chr2 127958752 127959302 -122728552 - L1MC4a LINE L1 -1286 6522 5975 1547 92 5 42 chr2 127960192 127960409 -122727445 + AluSq SINE Alu 1 209 -104 207 239 36 162 chr2 127962205 127962297 -122725557 - L2 LINE L2 -188 3084 3021 2388 86 7 0 chr2 127962297 127962599 -122725255 - AluSp SINE Alu -5 308 5 207 239 36 162 chr2 127962599 127962673 -122725181 - L2 LINE L2 -251 3021 2939 436 207 23 0 chr2 127962942 127963029 -122724825 + MER103 DNA DNA 57 145 -21 485 174 23 0 chr2 127963243 127963329 -122724525 + MER33 DNA MER1_type 1 88 -236 301 333 99 9 chr2 127963390 127963501 -122724353 + L2 LINE L2 3147 3267 -5 491 172 6 12 chr2 127964783 127964885 -122722969 + MLT1H LTR MaLR 64 154 -395 3304 129 18 18 chr2 127965324 127965828 -122722026 + MER84 LTR ERV1 1 504 -3 1212 195 38 111 chr2 127965871 127966183 -122721671 + L1MC5 LINE L1 6885 7141 -820 3121 127 5 0 chr2 127966183 127966615 -122721239 + MER57B LTR ERV1 1 434 0 1212 195 38 111 chr2 127966615 127966851 -122721003 + L1MC5 LINE L1 7141 7393 -568 499 289 124 48 chr2 127967176 127968191 -122719663 + L1MB8 LINE L1 3918 5009 -1137 1789 177 156 74 chr2 127968500 127969065 -122718789 + LTR36 LTR ERV1 1 611 0 403 336 0 8 chr2 127969878 127970003 -122717851 - L2 LINE L2 0 3313 3190 1783 134 8 0 chr2 127970081 127970343 -122717511 + AluSx SINE Alu 35 298 -14 223 318 37 19 chr2 127970755 127970862 -122716992 - MIR SINE MIR -72 190 82 361 247 41 62 chr2 128021450 128021644 -122666210 + L2 LINE L2 3124 3313 0 986 191 31 82 chr2 128022011 128022305 -122665549 - MLT1G LTR MaLR -8 582 304 355 259 95 20 chr2 128022354 128022501 -122665353 + L1MB8 LINE L1 5485 5642 -479 2141 41 11 8 chr2 128022541 128022809 -122665045 + AluY SINE Alu 23 291 -20 728 77 10 0 chr2 128022953 128023057 -122664797 + (GGAA)n Simple_repeat Simple_repeat 2 106 0 1949 189 19 21 chr2 128023062 128023491 -122664363 - MER6A DNA MER2_type -177 428 1 1163 202 72 27 chr2 128023491 128023822 -122664032 + L1MB8 LINE L1 5828 6173 -5 22 35 0 0 chr2 128023996 128024025 -122663829 + AT_rich Low_complexity Low_complexity 1 29 0 296 236 227 0 chr2 128024450 128024560 -122663294 - MIR SINE MIR -55 153 19 260 338 21 63 chr2 128025537 128025679 -122662175 + L2 LINE L2 3137 3272 0 352 335 26 5 chr2 128027423 128027617 -122660237 - L1MC4a LINE L1 -1924 5884 5687 288 227 168 10 chr2 128027622 128027845 -122660009 - L1MC4a LINE L1 -507 5614 5355 478 291 9 9 chr2 128028331 128028441 -122659413 + L2 LINE L2 3204 3313 0 351 0 0 0 chr2 128028491 128028530 -122659324 + (TG)n Simple_repeat Simple_repeat 2 40 0 252 335 90 6 chr2 128029017 128029184 -122658670 + MIR SINE MIR 35 215 -47 693 288 51 39 chr2 128030655 128031142 -122656712 + HAL1 LINE L1 1257 1749 -758 210 277 36 12 chr2 128031728 128031811 -122656043 - MER5B DNA MER1_type -76 102 18 1116 217 105 19 chr2 128032364 128032677 -122655177 - MER2 DNA MER2_type 0 345 6 5119 123 41 2 chr2 128033167 128034265 -122653589 + L1PA10 LINE L1 4471 5597 -571 1320 87 82 5 chr2 128034390 128034585 -122653269 + L1PA10 LINE L1 5946 6155 -13 197 32 0 32 chr2 128034588 128034619 -122653235 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 187 350 0 10 chr2 128034984 128035084 -122652770 + MIR SINE MIR 45 143 -65 195 129 0 0 chr2 128035443 128035474 -122652380 + (TTA)n Simple_repeat Simple_repeat 2 32 0 429 323 139 5 chr2 128036762 128036963 -122650891 - MIR SINE MIR -15 247 20 459 297 113 5 chr2 128037623 128037835 -122650019 + MIR SINE MIR 28 262 0 2055 226 104 19 chr2 128037978 128038509 -122649345 + MLT1A1-int LTR MaLR 1160 1735 0 1283 212 47 44 chr2 128038510 128038873 -122648981 + MLT1A1 LTR MaLR 2 365 0 790 165 13 0 chr2 128038877 128039035 -122648819 + L1MB3 LINE L1 6022 6181 -2 250 384 68 14 chr2 128039105 128039384 -122648470 + L2 LINE L2 2807 3100 -172 2273 283 42 28 chr2 128039485 128040261 -122647593 + L1ME LINE L1 856 1656 -4740 2008 141 0 16 chr2 128040261 128040566 -122647288 + AluJo SINE Alu 3 302 -10 2273 283 42 28 chr2 128040566 128040989 -122646865 + L1ME LINE L1 1656 2072 -4324 653 260 35 6 chr2 128040991 128041164 -122646690 + MLT1E LTR MaLR 1 178 -415 2137 276 36 7 chr2 128041207 128042111 -122645743 + L1ME LINE L1 4121 5051 -1164 1262 260 28 30 chr2 128042144 128042768 -122645086 + L1ME LINE L1 5264 5887 -348 604 290 90 43 chr2 128042784 128043196 -122644658 + L1ME2 LINE L1 1281 1737 -4803 2260 107 7 3 chr2 128043196 128043506 -122644348 + AluSx SINE Alu 1 311 -1 604 290 90 43 chr2 128043506 128043748 -122644106 + L1ME2 LINE L1 1737 1966 -4574 2597 46 0 0 chr2 128043762 128044067 -122643787 - AluY SINE Alu -6 305 1 1489 143 45 11 chr2 128044195 128044482 -122643372 + L1MA7 LINE L1 5989 6285 -6 34 79 0 0 chr2 128044659 128044735 -122643119 + AT_rich Low_complexity Low_complexity 1 76 0 425 258 33 6 chr2 128044860 128045042 -122642812 + L1ME2 LINE L1 2598 2784 -3756 2423 246 92 37 chr2 128045228 128046003 -122641851 + L1ME2 LINE L1 2885 3616 -2924 1908 128 7 35 chr2 128046003 128046295 -122641559 + AluSx SINE Alu 1 327 0 346 47 0 0 chr2 128046295 128046338 -122641516 + (TAAA)n Simple_repeat Simple_repeat 2 80 0 2423 246 92 37 chr2 128046338 128047372 -122640482 + L1ME2 LINE L1 3616 4751 -1789 1049 294 73 37 chr2 128047494 128047698 -122640156 + MLT2F LTR ERVL 184 379 -284 1060 234 63 41 chr2 128047698 128048062 -122639792 - MLT1A2 LTR MaLR -2 372 1 1049 294 73 37 chr2 128048062 128048320 -122639534 + MLT2F LTR ERVL 379 663 0 1662 230 95 32 chr2 128048323 128048915 -122638939 + L1ME2 LINE L1 4750 5398 -1142 2106 125 13 3 chr2 128048915 128049219 -122638635 + AluSq SINE Alu 2 308 -5 1662 230 95 32 chr2 128049219 128049352 -122638502 + L1ME2 LINE L1 5398 5521 -1019 691 156 9 0 chr2 128049353 128049462 -122638392 - Tigger3(Golem) DNA MER2_type 0 3029 2920 780 178 0 0 chr2 128049601 128049719 -122638135 - FLAM_C SINE Alu -15 118 1 412 185 0 0 chr2 128049726 128049791 -122638063 - Tigger3(Golem) DNA MER2_type -2960 69 5 1036 257 86 21 chr2 128049794 128050452 -122637402 + L1ME2 LINE L1 5529 6242 -316 564 131 107 107 chr2 128050453 128050621 -122637233 - L1MD1 LINE L1 -212 6030 5863 343 359 37 28 chr2 128050908 128051125 -122636729 + L1M4 LINE L1 5 223 -6319 968 252 102 52 chr2 128051436 128052536 -122635318 + L1M4 LINE L1 802 5767 -877 818 164 102 6 chr2 128054180 128054357 -122633497 - MLT1A1 LTR MaLR -171 194 1 24 32 0 0 chr2 128054563 128054594 -122633260 + AT_rich Low_complexity Low_complexity 1 31 0 414 292 103 38 chr2 128054636 128055006 -122632848 - Charlie8 DNA MER1_type -1949 468 75 474 327 155 29 chr2 128056010 128056429 -122631425 + L1MEd LINE L1 435 906 -5213 737 247 13 13 chr2 128056967 128057125 -122630729 + FRAM SINE Alu 1 158 -8 11587 190 7 21 chr2 128057126 128059712 -122628142 + L1PA15-16 LINE L1 2764 5311 -1538 1205 143 0 14 chr2 128059814 128060023 -122627831 + MER4C LTR ERV1 260 465 0 197 275 29 14 chr2 128064015 128064084 -122623770 - MIR SINE MIR -132 130 61 2162 110 0 3 chr2 128064196 128064488 -122623366 - AluSg SINE Alu -17 293 3 383 266 14 56 chr2 128064677 128064820 -122623034 - MER21A LTR ERV1 -123 808 672 1423 305 68 32 chr2 128064888 128065577 -122622277 - MER21B LTR ERV1 -149 714 1 207 244 0 24 chr2 128065647 128065688 -122622166 - L2 LINE L2 -62 3210 3171 632 241 132 19 chr2 128065711 128065923 -122621931 + MIR SINE MIR 2 237 -25 305 255 47 9 chr2 128066043 128066149 -122621705 - MER112 DNA MER1_type -9 251 142 348 119 0 0 chr2 128066172 128066231 -122621623 + (TG)n Simple_repeat Simple_repeat 2 60 0 1894 171 0 10 chr2 128066576 128066885 -122620969 + AluJo SINE Alu 2 307 -5 842 325 100 24 chr2 128066914 128067335 -122620519 - L2 LINE L2 -1 3312 2860 227 256 173 0 chr2 128067528 128067646 -122620208 - MIR SINE MIR -24 238 90 1702 208 137 61 chr2 128068444 128069200 -122618654 + LTR1B LTR ERV1 1 1020 0 390 261 118 19 chr2 128069250 128069411 -122618443 + MER77 LTR ERV1 41 217 -388 * 1272 261 47 33 chr2 128069409 128069831 -122618023 + MER77 LTR ERV1 172 599 -6 623 271 169 34 chr2 128070107 128070520 -122617334 + L2 LINE L2 2845 3313 0 198 103 0 0 chr2 128071434 128071463 -122616391 + (TG)n Simple_repeat Simple_repeat 2 30 0 28 0 0 0 chr2 128071516 128071544 -122616310 + AT_rich Low_complexity Low_complexity 1 28 0 1411 246 93 34 chr2 128071841 128072284 -122615570 - MLT2B1 LTR ERVL -51 469 1 1663 156 31 70 chr2 128072290 128072598 -122615256 - ERVL-B1 LTR ERVL -29 5735 5446 4013 103 15 5 chr2 128072598 128073183 -122614671 + L1PA11 LINE L1 5581 6171 -3 1663 156 31 70 chr2 128073183 128073291 -122614563 - ERVL-B1 LTR ERVL -318 5446 5335 2083 137 7 160 chr2 128073291 128073621 -122614233 - MER31A LTR ERV1 -10 475 184 407 141 0 56 chr2 128073621 128073692 -122614162 + AluJ/FRAM SINE Alu 228 294 -18 2083 137 7 160 chr2 128073692 128073852 -122614002 - MER31A LTR ERV1 -301 184 1 4533 162 37 22 chr2 128073852 128073948 -122613906 - ERVL-B1 LTR ERVL -422 5342 5249 1425 213 36 28 chr2 128073948 128074310 -122613544 - MLT1A1 LTR MaLR 0 365 1 4533 162 37 22 chr2 128074310 128075058 -122612796 - ERVL-B1 LTR ERVL -515 5249 4486 522 121 24 0 chr2 128075063 128075146 -122612708 - ERVL-B1 LTR ERVL -1431 4333 4249 * 2100 160 10 33 chr2 128075145 128075276 -122612578 - ERVL LTR ERVL -1276 4488 4356 2065 170 113 3 chr2 128075276 128075665 -122612189 - MSTB1 LTR MaLR 0 432 1 6668 223 75 5 chr2 128075665 128077208 -122610646 - MSTB1-int LTR MaLR 0 1651 1 2340 174 21 2 chr2 128077208 128077632 -122610222 - MSTB1 LTR MaLR 0 432 1 2100 160 10 33 chr2 128077632 128077891 -122609963 - ERVL LTR ERVL -1405 4359 4105 205 273 106 0 chr2 128078231 128078297 -122609557 - L2 LINE L2 0 3313 3241 21 0 0 0 chr2 128078363 128078384 -122609470 + AT_rich Low_complexity Low_complexity 1 21 0 1606 175 32 14 chr2 128078389 128078669 -122609185 + AluJb SINE Alu 1 285 -27 5747 108 16 2 chr2 128078803 128079689 -122608165 - L1PA11 LINE L1 -2 6172 5275 197 213 0 21 chr2 128080767 128080814 -122607040 + MIR SINE MIR 113 158 -104 238 267 158 17 chr2 128081163 128081283 -122606571 - MIR SINE MIR -63 199 63 386 284 7 64 chr2 128081616 128081696 -122606158 - L2 LINE L2 -4 3268 3198 1500 189 27 37 chr2 128081696 128081992 -122605862 + AluJb SINE Alu 1 293 -19 386 284 7 64 chr2 128081992 128082052 -122605802 - L2 LINE L2 -74 3198 3136 2027 133 7 16 chr2 128082353 128082661 -122605193 - AluSg SINE Alu -5 305 1 487 245 95 73 chr2 128083260 128083634 -122604220 - L2 LINE L2 -192 3080 2695 2790 130 41 9 chr2 128083637 128084284 -122603570 - MER39 LTR ERV1 0 639 1 202 370 37 37 chr2 128084742 128084877 -122602977 + L2 LINE L2 3137 3271 -1 1084 283 139 0 chr2 128085726 128086094 -122601760 - L2 LINE L2 -2 3311 2893 1447 160 28 0 chr2 128086970 128087257 -122600597 + L1MA7 LINE L1 5997 6291 0 286 353 22 38 chr2 128088018 128088202 -122599652 - L2 LINE L2 0 3313 3133 183 277 69 50 chr2 128088192 128088293 -122599561 + MIR SINE MIR 140 242 -20 * 274 254 26 18 chr2 128088371 128088485 -122599369 + L1MCc LINE L1 36 150 -6273 261 278 24 32 chr2 128088554 128088680 -122599174 + L1MCc LINE L1 260 384 -6039 477 200 14 29 chr2 128089283 128089423 -122598431 + L1MCc LINE L1 1120 1257 -5166 1031 264 141 27 chr2 128089636 128090904 -122596950 + L1MCc LINE L1 1486 2990 -3951 445 333 63 26 chr2 128091162 128091543 -122596311 + L1ME2 LINE L1 25 419 -6004 26 30 0 0 chr2 128091543 128091576 -122596278 + AT_rich Low_complexity Low_complexity 1 33 0 3875 254 62 52 chr2 128091863 128095094 -122592760 + L1ME2 LINE L1 827 4022 -2919 1667 204 13 0 chr2 128095094 128095402 -122592452 + AluJb SINE Alu 1 312 0 3875 254 62 52 chr2 128095402 128096025 -122591829 + L1ME2 LINE L1 4022 4901 -2040 1793 182 0 3 chr2 128096025 128096322 -122591532 - AluJb SINE Alu -16 296 1 3875 254 62 52 chr2 128096322 128096433 -122591421 + L1ME2 LINE L1 4901 5009 -1932 1201 243 114 30 chr2 128096513 128097012 -122590842 + L1ME2 LINE L1 5423 5963 -978 669 173 29 0 chr2 128097129 128097233 -122590621 - FRAM SINE Alu -24 152 46 189 291 87 29 chr2 128097592 128097695 -122590159 + MIR SINE MIR 36 144 -118 908 115 135 14 chr2 128098486 128098634 -122589220 + MSTA LTR MaLR 263 428 0 568 311 90 20 chr2 128098634 128099036 -122588818 + L1MEc LINE L1 1458 1887 -4509 416 197 94 8 chr2 128099028 128099145 -122588709 + L1ME2 LINE L1 6600 6726 -235 * 3643 225 35 49 chr2 128099141 128100229 -122587625 + L1M4 LINE L1 3710 4782 -1364 284 264 0 0 chr2 128100238 128100331 -122587523 + L1ME2 LINE L1 6865 7119 -10 930 300 99 17 chr2 128101193 128101656 -122586198 - LTR33 LTR ERVL -1 520 20 3041 83 18 45 chr2 128101658 128102103 -122585751 - MLT2A1 LTR ERVL -11 433 1 347 341 50 11 chr2 128102127 128102306 -122585548 + MIR SINE MIR 71 256 -6 201 294 0 0 chr2 128103547 128103598 -122584256 + GA-rich Low_complexity Low_complexity 1 51 0 229 236 64 123 chr2 128103941 128104144 -122583710 - L2 LINE L2 -4 3309 3119 452 294 36 72 chr2 128104268 128104360 -122583494 + L1MB5 LINE L1 2 96 -6446 2158 76 9 57 chr2 128104360 128104675 -122583179 - AluSx SINE Alu -12 300 1 452 294 36 72 chr2 128104675 128104858 -122582996 + L1MB5 LINE L1 96 267 -6275 231 269 194 46 chr2 128105284 128105392 -122582462 - L2 LINE L2 -16 3297 3174 803 159 28 97 chr2 128106251 128106538 -122581316 - MER31-int LTR ERV1 -3250 1686 1270 10022 230 79 19 chr2 128108111 128109012 -122578842 + L1MB5 LINE L1 581 1427 -5245 655 92 18 0 chr2 128109012 128109121 -122578733 + (TA)n Simple_repeat Simple_repeat 1 111 0 10022 230 79 19 chr2 128109121 128110693 -122577161 + L1MB5 LINE L1 1427 2904 -3768 1879 170 0 0 chr2 128110693 128111006 -122576848 - AluSx SINE Alu 0 313 1 10022 230 79 19 chr2 128111006 128114291 -122573563 + L1MB5 LINE L1 2904 6671 -1 416 347 72 58 chr2 128114333 128114906 -122572948 - L2 LINE L2 -339 2975 2395 273 315 99 75 chr2 128115503 128116077 -122571777 - L2 LINE L2 -89 3183 2597 334 241 46 0 chr2 128116132 128116219 -122571635 + MIR SINE MIR 79 169 -93 2169 108 0 0 chr2 128116219 128116537 -122571317 - AluSq SINE Alu 0 318 1 211 315 72 9 chr2 128116807 128116918 -122570936 + MIR SINE MIR 23 140 -122 1754 171 7 3 chr2 128117314 128117600 -122570254 + AluJo SINE Alu 1 287 -25 2186 236 111 17 chr2 128117672 128118329 -122569525 + L1M4 LINE L1 3504 4222 -1924 * 2281 220 56 17 chr2 128118318 128119100 -122568754 + L1M4 LINE L1 4993 5818 -360 834 127 10 151 chr2 128119103 128119308 -122568546 - MER6 DNA MER2_type 0 865 690 1981 120 0 4 chr2 128119308 128119582 -122568272 + AluSx SINE Alu 1 273 -39 1340 51 11 0 chr2 128119585 128119761 -122568093 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 480 191 11 33 chr2 128119771 128119954 -122567900 + GA-rich Low_complexity Low_complexity 2 180 0 201 74 0 0 chr2 128120861 128120888 -122566966 + (CCCGG)n Simple_repeat Simple_repeat 4 30 0 243 281 69 37 chr2 128122042 128122184 -122565670 + MIR3 SINE MIR 106 254 -8 512 292 64 68 chr2 128123483 128123952 -122563902 - L1MC/D LINE L1 -2032 5776 5310 190 276 53 0 chr2 128123965 128124041 -122563813 - MIR SINE MIR -76 132 53 * 249 261 101 63 chr2 128124017 128124176 -122563678 + MIR SINE MIR 7 169 -69 1191 137 0 52 chr2 128124427 128124638 -122563216 - AluSg/x SINE Alu 0 309 110 2303 83 3 13 chr2 128126115 128126415 -122561439 - AluSp SINE Alu -16 297 1 6010 127 19 2 chr2 128127628 128129065 -122558789 + L1PA14 LINE L1 4704 6158 -3 497 274 29 33 chr2 128129200 128129474 -122558380 + L1ME3A LINE L1 919 1191 -4928 373 280 155 27 chr2 128129520 128129838 -122558016 + L1ME3A LINE L1 1343 1669 -1004 340 309 117 18 chr2 128130214 128131083 -122556771 + L1ME3A LINE L1 2091 2873 -3256 1535 183 92 3 chr2 128131083 128131411 -122556443 - MER46B DNA MER2_type -4 232 1 340 309 117 18 chr2 128131411 128132228 -122555626 + L1ME3A LINE L1 2873 4006 -2123 14249 80 8 3 chr2 128132228 128134840 -122553014 - L1PA7 LINE L1 -6 6148 3527 340 309 117 18 chr2 128134840 128135004 -122552850 + L1ME3A LINE L1 4006 4152 -1977 1215 273 94 26 chr2 128135072 128135993 -122551861 + L1ME3A LINE L1 4946 5933 -220 29 47 0 0 chr2 128136300 128136343 -122551511 + AT_rich Low_complexity Low_complexity 1 43 0 241 239 136 0 chr2 128136586 128136674 -122551180 + MIR SINE MIR 75 174 -88 497 246 76 67 chr2 128136699 128137040 -122550814 + L1ME4a LINE L1 5540 5883 -238 332 346 54 32 chr2 128138236 128138421 -122549433 - MIR SINE MIR -54 208 20 1811 157 11 0 chr2 128138868 128139148 -122548706 + AluSx SINE Alu 1 283 -29 654 289 21 21 chr2 128139975 128140165 -122547689 + MIR3 SINE MIR 6 195 -13 276 242 0 0 chr2 128140825 128140891 -122546963 + MIR SINE MIR 89 154 -108 310 272 127 19 chr2 128141614 128141772 -122546082 - MIR SINE MIR -34 228 54 1171 194 23 9 chr2 128141780 128141996 -122545858 - MER20 DNA MER1_type 0 219 1 211 341 28 78 chr2 128142207 128142386 -122545468 + MER5A DNA MER1_type 17 186 -3 1701 226 91 43 chr2 128142450 128143055 -122544799 - LTR27 LTR ERV1 -2 634 1 230 155 0 169 chr2 128143476 128143547 -122544307 - MER5A DNA MER1_type -28 161 103 1007 203 89 5 chr2 128144499 128144701 -122543153 + MER20 DNA MER1_type 1 219 0 2397 113 84 68 chr2 128144715 128145305 -122542549 - MER4E LTR ERV1 0 779 1 382 272 97 4 chr2 128145309 128145436 -122542418 - MIR SINE MIR -62 146 24 894 226 47 47 chr2 128146285 128146625 -122541229 + L1M4 LINE L1 4205 4544 -1602 1576 193 44 71 chr2 128146652 128147103 -122540751 + L1ME LINE L1 403 841 -5204 1856 224 159 44 chr2 128147149 128147576 -122540278 - MER21B LTR ERV1 -74 857 481 3394 130 39 18 chr2 128147576 128148091 -122539763 - MER1A DNA MER1_type -1 526 1 1856 224 159 44 chr2 128148091 128148351 -122539503 - MER21B LTR ERV1 -450 481 1 582 224 30 8 chr2 128148413 128148547 -122539307 - LTR45 LTR ERV1 0 525 389 2878 246 54 36 chr2 128148963 128149640 -122538214 + L1ME LINE L1 2187 2851 -3713 2054 129 7 0 chr2 128149640 128149934 -122537920 + AluSg SINE Alu 1 296 -14 2878 246 54 36 chr2 128149934 128150110 -122537744 + L1ME LINE L1 2851 3022 -3542 366 111 49 62 chr2 128150110 128150191 -122537663 - MADE1 DNA Mariner 0 80 1 2878 246 54 36 chr2 128150191 128150959 -122536895 + L1ME LINE L1 3022 3831 -2733 564 165 0 0 chr2 128150945 128151048 -122536806 + L1ME LINE L1 4874 4976 -1588 * 6296 221 45 29 chr2 128151034 128153851 -122534003 + L1MC2 LINE L1 3366 6210 -134 457 293 86 102 chr2 128154238 128154442 -122533412 + L1ME LINE L1 5615 5821 -718 1630 35 0 5 chr2 128154442 128154640 -122533214 + L1PA4 LINE L1 5956 6152 -3 457 293 86 102 chr2 128154640 128154921 -122532933 + L1ME LINE L1 5821 6100 -439 366 267 0 0 chr2 128154929 128155019 -122532835 - MIR SINE MIR -2 260 171 336 344 47 0 chr2 128155568 128155696 -122532158 + L2 LINE L2 3139 3272 0 198 0 0 0 chr2 128156665 128156687 -122531167 + (TA)n Simple_repeat Simple_repeat 2 23 0 476 295 68 0 chr2 128156953 128157160 -122530694 + L1ME3A LINE L1 5419 5639 -523 180 0 0 0 chr2 128157176 128157196 -122530658 + (TG)n Simple_repeat Simple_repeat 2 21 0 270 192 41 29 chr2 128157201 128157373 -122530481 + (TATATG)n Simple_repeat Simple_repeat 4 177 0 1292 226 34 120 chr2 128157378 128157729 -122530125 + L1ME3A LINE L1 5639 5924 -246 2105 101 27 0 chr2 128157729 128158027 -122529827 + AluSc SINE Alu 1 306 -3 1292 226 34 120 chr2 128158027 128158241 -122529613 + L1ME3A LINE L1 5924 6155 -15 1055 310 243 35 chr2 128158268 128159713 -122528141 - L2 LINE L2 -1480 1834 90 200 356 0 0 chr2 128159931 128160004 -122527850 - L3 LINE CR1 -753 824 752 227 248 73 87 chr2 128160046 128160252 -122527602 - HAL1 LINE L1 -34 2473 2271 253 207 255 41 chr2 128160474 128160619 -122527235 + LTR33 LTR ERVL 314 489 -32 489 298 67 58 chr2 128161462 128161878 -122525976 - HAL1 LINE L1 -711 1796 1377 186 208 10 20 chr2 128162006 128162107 -122525747 + (TA)n Simple_repeat Simple_repeat 2 101 0 372 253 132 46 chr2 128162107 128162281 -122525573 - HAL1 LINE L1 -1226 1281 1093 1407 173 18 36 chr2 128162284 128162340 -122525514 - MSTA LTR MaLR -155 273 218 1856 161 0 3 chr2 128162340 128162645 -122525209 + AluSx SINE Alu 1 304 -8 1407 173 18 36 chr2 128162645 128162866 -122524988 - MSTA LTR MaLR -210 218 1 1179 151 149 84 chr2 128163853 128164236 -122523618 + LTR48 LTR ERV1 1 408 -379 217 245 238 0 chr2 128164637 128164743 -122523111 + MIR3 SINE MIR 28 155 -53 2253 210 81 44 chr2 128165276 128165699 -122522155 + LTR48B LTR ERV1 1 456 -188 1854 131 201 6 chr2 128165699 128166057 -122521797 + MSTA LTR MaLR 1 428 0 2253 210 81 44 chr2 128166057 128166252 -122521602 + LTR48B LTR ERV1 456 642 -2 2582 81 63 72 chr2 128166840 128166879 -122520975 - MLT2A1 LTR ERVL -2 442 404 279 0 0 0 chr2 128166879 128166910 -122520944 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 351 0 0 0 chr2 128166909 128166948 -122520906 + (GA)n Simple_repeat Simple_repeat 2 40 0 2582 81 63 72 chr2 128166910 128167354 -122520500 - MLT2A1 LTR ERVL -40 404 1 44489 72 17 1 chr2 128167354 128172922 -122514932 - HERVL-A1-A1 LTR ERVL 0 5654 1 3209 88 18 16 chr2 128172922 128173365 -122514489 - MLT2A1 LTR ERVL 0 444 1 438 258 74 23 chr2 128173538 128173771 -122514083 + L1ME4a LINE L1 5495 5743 -378 261 254 123 14 chr2 128173805 128173943 -122513911 + L1ME4a LINE L1 5845 5997 -124 389 315 97 9 chr2 128174764 128174980 -122512874 - MIR SINE MIR -8 254 20 2149 81 3 3 chr2 128175460 128175778 -122512076 + AluSp SINE Alu 4 321 0 228 300 50 0 chr2 128175848 128175908 -122511946 - MIR SINE MIR -89 173 111 262 298 113 57 chr2 128178302 128178443 -122509411 + MIR SINE MIR 106 254 -8 537 240 23 31 chr2 128179445 128179574 -122508280 + MER45A DNA AcHobo 51 178 0 293 277 25 59 chr2 128179575 128179694 -122508160 + MIR SINE MIR 131 245 -17 2093 122 0 0 chr2 128179900 128180204 -122507650 - AluSc SINE Alu -5 304 1 181 234 26 52 chr2 128180264 128180341 -122507513 + MIR SINE MIR 58 132 -76 459 0 0 0 chr2 128180819 128180870 -122506984 + (TC)n Simple_repeat Simple_repeat 2 52 0 201 250 118 0 chr2 128181190 128181258 -122506596 - MIR SINE MIR -70 192 117 644 219 189 25 chr2 128181352 128181553 -122506301 - ORSL DNA AcHobo -28 247 14 336 138 0 0 chr2 128181815 128181880 -122505974 + (TC)n Simple_repeat Simple_repeat 2 66 0 1315 184 23 8 chr2 128182102 128182358 -122505496 + Tigger7 DNA MER2_type 2232 2491 0 266 288 69 56 chr2 128183306 128183466 -122504388 - MIR3 SINE MIR -39 169 8 573 76 0 0 chr2 128183576 128183655 -122504199 + (CA)n Simple_repeat Simple_repeat 2 80 0 2353 84 3 0 chr2 128184262 128184570 -122503284 - AluSp SINE Alu -4 309 1 201 223 21 128 chr2 128185663 128185757 -122502097 - L2 LINE L2 -3120 194 111 204 302 32 0 chr2 128186224 128186287 -122501567 - MIR SINE MIR -185 77 13 669 254 30 10 chr2 128187633 128187834 -122500020 + MER58A DNA MER1_type 1 205 -19 987 301 70 9 chr2 128188534 128188993 -122498861 - L2 LINE L2 -8 3305 2819 285 109 0 0 chr2 128189271 128189317 -122498537 + (CA)n Simple_repeat Simple_repeat 1 46 0 227 365 0 0 chr2 128190425 128190499 -122497355 - MIR SINE MIR -93 115 42 231 146 0 0 chr2 128190653 128190694 -122497160 + (CA)n Simple_repeat Simple_repeat 2 42 0 399 136 57 11 chr2 128191784 128191872 -122495982 + MER53 DNA DNA 96 187 -2 283 270 0 0 chr2 128191884 128191947 -122495907 + MER5B DNA MER1_type 108 170 -8 201 132 0 0 chr2 128193974 128194012 -122493842 + (TG)n Simple_repeat Simple_repeat 1 38 0 360 230 0 0 chr2 128194060 128194195 -122493659 + (TG)n Simple_repeat Simple_repeat 1 135 0 243 223 43 21 chr2 128194210 128194304 -122493550 + (TGAG)n Simple_repeat Simple_repeat 2 97 0 549 188 0 0 chr2 128194308 128194462 -122493392 + (TG)n Simple_repeat Simple_repeat 2 155 0 2128 107 0 3 chr2 128194807 128195117 -122492737 + AluY SINE Alu 1 309 -2 211 328 16 0 chr2 128196152 128196213 -122491641 + L2 LINE L2 3193 3254 -18 1864 118 14 3 chr2 128196463 128196751 -122491103 + AluSp SINE Alu 1 291 -22 439 255 0 11 chr2 128196800 128196894 -122490960 + MER58 DNA MER1_type 7 99 -116 520 298 140 28 chr2 128197918 128198418 -122489436 - L1ME4a LINE L1 -2 6119 5564 526 137 11 11 chr2 128198580 128198675 -122489179 + AluY SINE Alu 217 311 0 2176 110 0 7 chr2 128199905 128200196 -122487658 + AluSx SINE Alu 4 292 -20 2317 118 7 0 chr2 128202244 128202549 -122485305 - AluSx SINE Alu -5 307 1 236 293 104 28 chr2 128203412 128203518 -122484336 - L2 LINE L2 -14 3258 3145 261 276 79 55 chr2 128204046 128204160 -122483694 + L2 LINE L2 2932 3048 -224 610 251 132 0 chr2 128204160 128204327 -122483527 - MER5A DNA MER1_type 0 189 1 442 318 76 14 chr2 128204811 128205034 -122482820 + MIR SINE MIR 16 252 -10 282 281 0 0 chr2 128205275 128205339 -122482515 - L2 LINE L2 0 3313 3250 396 281 73 18 chr2 128206090 128206291 -122481563 + MIR SINE MIR 19 226 -36 1434 168 64 82 chr2 128206291 128206731 -122481123 + MSTB1 LTR MaLR 1 432 0 221 295 39 13 chr2 128206793 128206871 -122480983 - L2 LINE L2 -1 3312 3233 236 242 15 15 chr2 128207842 128207908 -122479946 - MER103 DNA DNA -100 66 1 607 121 61 0 chr2 128208934 128209033 -122478821 + MSTD LTR MaLR 292 396 0 181 339 32 0 chr2 128209095 128209157 -122478697 - L2 LINE L2 -1 3312 3249 209 213 0 21 chr2 128209672 128209719 -122478135 + (TATG)n Simple_repeat Simple_repeat 2 47 0 236 242 15 15 chr2 128210122 128210188 -122477666 - MER103 DNA DNA -100 66 1 319 250 0 0 chr2 128211162 128211226 -122476628 - L2 LINE L2 0 3313 3250 342 300 73 18 chr2 128211981 128212182 -122475672 + MIR SINE MIR 19 226 -36 1543 157 64 82 chr2 128212182 128212622 -122475232 + MSTB1 LTR MaLR 1 432 0 181 339 32 0 chr2 128212684 128212746 -122475108 - L2 LINE L2 -1 3312 3249 209 213 0 21 chr2 128213260 128213307 -122474547 + (TATG)n Simple_repeat Simple_repeat 2 47 0 236 242 15 15 chr2 128213709 128213775 -122474079 - MER103 DNA DNA -100 66 1 275 200 33 17 chr2 128214354 128214414 -122473440 - MER81 DNA DNA 0 114 54 184 200 36 0 chr2 128214488 128214543 -122473311 + GA-rich Low_complexity Low_complexity 4 60 0 1215 236 71 12 chr2 128214639 128214978 -122472876 + MER47A DNA MER2_type 7 365 -1 236 304 26 52 chr2 128216244 128216359 -122471495 + MIR SINE MIR 49 160 -102 264 290 0 14 chr2 128217975 128218044 -122469810 + G-rich Low_complexity Low_complexity 3 70 0 428 296 41 18 chr2 128218074 128218243 -122469611 - MIR SINE MIR -55 207 35 442 287 34 63 chr2 128219657 128219840 -122468014 + MIR SINE MIR 20 196 -66 1602 256 33 9 chr2 128219840 128220289 -122467565 - LTR40b LTR ERVL 0 462 3 442 287 34 63 chr2 128220289 128220342 -122467512 + MIR SINE MIR 196 249 -13 2313 98 0 3 chr2 128220931 128221245 -122466609 - AluSq SINE Alu 0 313 1 697 106 29 0 chr2 128221983 128222087 -122465767 - U6 snRNA snRNA 0 107 1 2243 135 0 0 chr2 128223505 128223808 -122464046 + AluSx SINE Alu 1 303 -9 207 186 0 0 chr2 128224222 128224265 -122463589 + (TA)n Simple_repeat Simple_repeat 1 43 0 1168 96 45 50 chr2 128224271 128224470 -122463384 + Tigger2a DNA MER2_type 5 202 -232 916 193 0 6 chr2 128224470 128224631 -122463223 - FRAM SINE Alu -7 169 10 1015 185 84 26 chr2 128224639 128224866 -122462988 + Tigger2a DNA MER2_type 204 443 -1 340 214 11 67 chr2 128224874 128224963 -122462891 + L1MC4 LINE L1 6620 6703 -1339 944 290 30 15 chr2 128225064 128225467 -122462387 + L1ME4a LINE L1 5530 5938 -183 26 30 0 0 chr2 128225716 128225749 -122462105 + AT_rich Low_complexity Low_complexity 1 33 0 606 213 99 50 chr2 128226073 128226275 -122461579 - MIR SINE MIR -5 257 46 187 308 144 19 chr2 128226815 128226919 -122460935 - L2 LINE L2 -1 3271 3155 272 337 31 36 chr2 128227234 128227430 -122460424 - L2 LINE L2 -432 2882 2688 1741 112 0 0 chr2 128227748 128227971 -122459883 - AluSc SINE Alu -16 293 71 402 300 46 42 chr2 128228292 128228729 -122459125 + L1MDa LINE L1 1495 1990 -4635 761 283 184 22 chr2 128228800 128229224 -122458630 + L1MDa LINE L1 2215 2751 -3947 348 295 0 8 chr2 128229228 128229350 -122458504 + L1MDa LINE L1 2826 2946 -3594 361 264 16 25 chr2 128229674 128229795 -122458059 - MIR SINE MIR -122 140 21 180 392 121 20 chr2 128229906 128230105 -122457749 - L2 LINE L2 -51 3221 3003 2232 92 3 7 chr2 128230258 128230550 -122457304 - AluY SINE Alu -14 297 7 2251 88 0 10 chr2 128230565 128230871 -122456983 - AluY SINE Alu -8 303 1 1317 72 0 0 chr2 128231047 128231200 -122456654 - AluSq SINE Alu -160 153 1 638 259 9 69 chr2 128232322 128232538 -122455316 - MLT1J LTR MaLR -79 432 230 231 315 29 95 chr2 128233226 128233499 -122454355 - L2 LINE L2 -2120 1194 940 268 64 43 0 chr2 128235066 128235113 -122452741 + (TC)n Simple_repeat Simple_repeat 1 49 0 1955 132 64 14 chr2 128235516 128235873 -122451981 - THE1C LTR MaLR 0 375 1 215 228 0 18 chr2 128236331 128236388 -122451466 + (TG)n Simple_repeat Simple_repeat 1 56 0 360 230 0 0 chr2 128236416 128236551 -122451303 + (TG)n Simple_repeat Simple_repeat 1 135 0 243 223 43 21 chr2 128236566 128236660 -122451194 + (TGAG)n Simple_repeat Simple_repeat 2 97 0 549 188 0 0 chr2 128236664 128236818 -122451036 + (TG)n Simple_repeat Simple_repeat 2 155 0 2273 73 9 28 chr2 128237163 128237480 -122450374 + AluY SINE Alu 1 311 0 1000 239 31 5 chr2 128237778 128238000 -122449854 - MIR SINE MIR -21 241 14 198 0 0 0 chr2 128239490 128239512 -122448342 + (TA)n Simple_repeat Simple_repeat 1 22 0 2245 115 6 19 chr2 128239950 128240264 -122447590 - AluSg SINE Alu 0 310 1 343 302 80 36 chr2 128240948 128241173 -122446681 - MIR SINE MIR 0 262 28 570 13 38 0 chr2 128241320 128241399 -122446455 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 269 267 116 34 chr2 128241598 128241744 -122446110 + MIR SINE MIR 17 174 -88 324 335 82 12 chr2 128242466 128242636 -122445218 - MIR SINE MIR -74 188 7 208 329 25 13 chr2 128243029 128243108 -122444746 + MIR SINE MIR 154 233 -29 245 271 0 8 chr2 128243166 128243295 -122444559 + (CA)n Simple_repeat Simple_repeat 2 129 0 390 259 27 41 chr2 128243494 128243641 -122444213 + MLT1I LTR MaLR 2 146 -263 283 327 78 0 chr2 128243701 128243854 -122444000 + MLT1I LTR MaLR 241 405 -4 371 301 191 28 chr2 128243986 128244311 -122443543 - L2 LINE L2 0 3272 2895 426 172 11 11 chr2 128244471 128244564 -122443290 + AluJ/FLAM SINE Alu 1 93 -219 225 167 0 0 chr2 128244676 128244730 -122443124 + C-rich Low_complexity Low_complexity 1 54 0 240 178 0 68 chr2 128244753 128244826 -122443028 + C-rich Low_complexity Low_complexity 5 72 0 226 167 71 0 chr2 128244983 128245025 -122442829 + L2 LINE L2 3204 3248 -24 2329 100 7 0 chr2 128246418 128246719 -122441135 - AluSc SINE Alu -6 303 1 490 123 12 25 chr2 128246720 128246801 -122441053 - MSTC LTR MaLR -348 80 1 2253 110 10 0 chr2 128247172 128247464 -122440390 + AluSc SINE Alu 1 295 -14 239 278 56 83 chr2 128247550 128247694 -122440160 - MIR SINE MIR 0 262 123 304 304 158 0 chr2 128247714 128247872 -122439982 + L2 LINE L2 2870 3052 -220 229 229 0 0 chr2 128248531 128248579 -122439275 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 228 316 0 0 chr2 128248541 128248620 -122439234 + (TTCA)n Simple_repeat Simple_repeat 2 80 0 * 213 277 21 32 chr2 128249426 128249520 -122438334 + (TTCA)n Simple_repeat Simple_repeat 1 93 0 801 240 53 99 chr2 128251005 128251510 -122436344 - HAL1b LINE L1 -360 988 507 545 263 58 118 chr2 128251503 128252020 -122435834 - HAL1b LINE L1 -637 711 226 * 607 140 10 40 chr2 128252098 128252184 -122435670 - Tigger7 DNA MER2_type -1 2486 2402 1770 179 20 15 chr2 128252184 128252525 -122435329 + MER2 DNA MER2_type 2 344 0 607 140 10 40 chr2 128252525 128252538 -122435316 - Tigger7 DNA MER2_type -85 2402 2390 * 1114 260 8 16 chr2 128252537 128252787 -122435067 - Tigger7 DNA MER2_type -2220 267 20 420 220 76 15 chr2 128252834 128252966 -122434888 + MIR SINE MIR 98 237 -25 729 207 164 0 chr2 128253026 128253239 -122434615 + MIR SINE MIR 6 253 -9 211 208 0 21 chr2 128253554 128253602 -122434252 + (TG)n Simple_repeat Simple_repeat 1 47 0 320 282 0 0 chr2 128254258 128254343 -122433511 - L1MA9 LINE L1 0 6312 6228 6873 201 43 5 chr2 128254810 128256137 -122431717 - ERVL LTR ERVL -2818 2946 1570 180 0 0 0 chr2 128256768 128256788 -122431066 + (T)n Simple_repeat Simple_repeat 1 20 0 2284 130 8 31 chr2 128257860 128258244 -122429610 - THE1C LTR MaLR 0 375 1 290 329 47 51 chr2 128259096 128259330 -122428524 - L2 LINE L2 -97 3175 2943 3687 219 127 24 chr2 128259338 128260520 -122427334 + L1MC4 LINE L1 6733 8036 -6 932 180 32 42 chr2 128260524 128260741 -122427113 + MIR SINE MIR 27 241 -21 623 176 93 50 chr2 128261303 128261485 -122426369 - MIR SINE MIR -3 259 70 287 248 0 51 chr2 128261987 128262124 -122425730 + C-rich Low_complexity Low_complexity 2 131 0 596 138 0 11 chr2 128262225 128262312 -122425542 - AluJ/FLAM SINE Alu -215 97 12 242 233 33 56 chr2 128262323 128262413 -122425441 + L1MC4 LINE L1 7815 7902 -140 2079 138 0 7 chr2 128262537 128262841 -122425013 + AluSg SINE Alu 1 302 -8 2260 290 101 51 chr2 128262876 128263162 -122424692 + L1M4 LINE L1 2740 3010 -3136 8316 130 18 8 chr2 128263162 128264451 -122423403 + HSMAR2 DNA Mariner 1 1302 0 2260 290 101 51 chr2 128264451 128266189 -122421665 + L1M4 LINE L1 3010 4866 -1280 504 240 129 27 chr2 128266291 128266649 -122421205 - LTR50 LTR ERVL -306 489 10 290 252 26 67 chr2 128267315 128267469 -122420385 + MLT1K LTR MaLR 140 264 -324 874 292 155 32 chr2 128267796 128268235 -122419619 + Charlie8 DNA MER1_type 50 542 -1875 658 185 50 149 chr2 128268437 128268739 -122419115 - MLT1A1 LTR MaLR 0 365 94 358 280 106 21 chr2 128269706 128269942 -122417912 + MLT1L LTR MaLR 352 607 -8 228 35 0 0 chr2 128269944 128269973 -122417881 + (TTG)n Simple_repeat Simple_repeat 2 30 0 447 205 0 0 chr2 128271117 128271195 -122416659 + L1M3d LINE L1 415 492 -5811 52 17 0 0 chr2 128271205 128271264 -122416590 + AT_rich Low_complexity Low_complexity 1 59 0 907 344 31 18 chr2 128271301 128271691 -122416163 + L1M3d LINE L1 530 924 -5379 9895 232 42 16 chr2 128271692 128275790 -122412064 + L1M3d LINE L1 819 4972 -1410 355 319 30 0 chr2 128275811 128275946 -122411908 + MIR SINE MIR 44 182 -80 261 257 71 35 chr2 128276783 128276896 -122410958 - MER63 DNA MER1_type -93 743 1 594 250 101 10 chr2 128277743 128277951 -122409903 + L1MC5 LINE L1 7268 7494 -467 203 0 37 0 chr2 128278608 128278635 -122409219 + (CAG)n Simple_repeat Simple_repeat 3 30 0 2133 109 31 0 chr2 128278897 128279191 -122408663 + AluSx SINE Alu 1 303 -9 261 241 0 0 chr2 128279434 128279492 -122408362 - MIR SINE MIR -69 139 82 1466 193 84 21 chr2 128280656 128280988 -122406866 + MLT2D LTR ERVL 1 353 -61 198 0 0 0 chr2 128280988 128281010 -122406844 + (TC)n Simple_repeat Simple_repeat 1 22 0 223 141 0 42 chr2 128281389 128281460 -122406394 + (TTGG)n Simple_repeat Simple_repeat 1 68 0 180 102 61 0 chr2 128281455 128281504 -122406350 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 * 742 77 33 39 chr2 128281516 128281697 -122406157 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 578 286 96 9 chr2 128281713 128281933 -122405921 + L1ME LINE L1 5567 5805 -365 1892 144 7 7 chr2 128282237 128282528 -122405326 - AluSx SINE Alu -21 291 1 2435 92 0 0 chr2 128282781 128283087 -122404767 + AluSq SINE Alu 1 306 -7 925 250 94 68 chr2 128283444 128283900 -122403954 - MLT1H1 LTR MaLR -5 550 83 986 285 72 41 chr2 128284077 128284142 -122403712 - L2 LINE L2 -893 2421 2359 2007 109 7 36 chr2 128284142 128284446 -122403408 + AluSx SINE Alu 17 311 -1 986 285 72 41 chr2 128284446 128284868 -122402986 - L2 LINE L2 -955 2359 1919 6715 182 85 30 chr2 128284885 128285418 -122402436 + L1MC3 LINE L1 5058 5561 -585 2043 150 39 25 chr2 128285418 128285777 -122402077 + THE1B LTR MaLR 1 364 0 6715 182 85 30 chr2 128285777 128286520 -122401334 + L1MC3 LINE L1 5561 4970 -1176 2264 102 0 0 chr2 128286520 128286824 -122401030 + AluSx SINE Alu 1 304 0 6715 182 85 30 chr2 128286824 128287284 -122400570 + L1MC3 LINE L1 4969 5403 -743 1642 185 18 15 chr2 128287282 128287541 -122400313 + L1MC3 LINE L1 7262 7524 -261 * 2103 116 45 3 chr2 128287541 128287833 -122400021 + AluSx SINE Alu 1 304 -8 1642 185 18 15 chr2 128287833 128287908 -122399946 + L1MC3 LINE L1 7524 7597 -188 261 264 123 19 chr2 128287919 128288025 -122399829 + L1M4 LINE L1 151 267 -6275 749 206 73 183 chr2 128288180 128288766 -122399088 + L1M4 LINE L1 551 1072 -5470 368 193 48 0 chr2 128288776 128288859 -122398995 + L1M4 LINE L1 2278 2364 -4282 281 180 82 0 chr2 128288859 128288920 -122398934 + MLT1B LTR MaLR 325 390 0 1559 233 86 44 chr2 128288927 128289486 -122398368 + L1MB5 LINE L1 5454 6004 -355 2181 109 7 7 chr2 128289486 128289788 -122398066 - AluSx SINE Alu -10 302 1 1559 233 86 44 chr2 128289788 128290125 -122397729 + L1MB5 LINE L1 6004 6325 -34 375 316 8 0 chr2 128290656 128290789 -122397065 + MIR3 SINE MIR 68 201 -7 1181 224 173 5 chr2 128290909 128291320 -122396534 - L1M4 LINE L1 -1538 4608 4129 1336 114 93 96 chr2 128291407 128291687 -122396167 - L1P5 LINE L1 -349 5807 5529 274 122 0 0 chr2 128291695 128291744 -122396110 + L1PB4 LINE L1 6107 6155 -1 333 0 0 0 chr2 128292938 128292975 -122394879 + (CA)n Simple_repeat Simple_repeat 1 37 0 194 328 95 0 chr2 128293644 128293760 -122394094 + MIR SINE MIR 117 243 -19 831 246 119 14 chr2 128293971 128294256 -122393598 + MER20B DNA MER1_type 180 494 -289 886 221 60 29 chr2 128294367 128294648 -122393206 + MER20B DNA MER1_type 492 781 -2 181 200 0 0 chr2 128295064 128295099 -122392755 - MIR SINE MIR -111 151 117 234 281 124 33 chr2 128295789 128295910 -122391944 - L2 LINE L2 -1 3312 3181 191 353 171 0 chr2 128296558 128296728 -122391126 - L3 LINE CR1 -86 1491 1293 201 179 60 41 chr2 128296800 128296887 -122390967 + MIR SINE MIR 63 149 -59 1223 145 0 5 chr2 128297302 128297495 -122390359 - AluJb SINE Alu -120 192 1 312 180 56 22 chr2 128297496 128297585 -122390269 - L1P LINE L1 -2449 3697 3606 2619 177 25 0 chr2 128497973 128498498 -122189356 - L1 LINE L1 -1929 4217 3680 2020 139 35 35 chr2 128498500 128498875 -122188979 + THE1C LTR MaLR 1 375 0 3163 115 78 6 chr2 128498877 128499400 -122188454 + THE1C-int LTR MaLR 3 563 -1017 348 292 68 28 chr2 128499943 128500126 -122187728 - MIR SINE MIR -67 141 1 190 267 22 0 chr2 128501221 128501311 -122186543 + (TCCA)n Simple_repeat Simple_repeat 4 95 0 236 281 16 0 chr2 128501313 128501377 -122186477 - L2 LINE L2 0 3272 3208 2510 77 0 0 chr2 128502444 128502744 -122185110 + AluSg SINE Alu 1 300 -10 802 198 119 45 chr2 128502976 128503244 -122184610 + MLT2D LTR ERVL 12 299 -115 195 69 0 0 chr2 128503267 128503296 -122184558 + (TAGA)n Simple_repeat Simple_repeat 2 30 0 255 125 0 0 chr2 128503309 128503349 -122184505 + (TG)n Simple_repeat Simple_repeat 1 40 0 242 188 0 0 chr2 128503349 128503397 -122184457 + MLT2D LTR ERVL 464 511 -9 211 231 26 51 chr2 128504642 128504720 -122183134 + C-rich Low_complexity Low_complexity 2 77 0 312 129 29 14 chr2 128505167 128505237 -122182617 + (TG)n Simple_repeat Simple_repeat 2 72 0 2120 113 43 0 chr2 128505296 128505596 -122182258 - AluSq SINE Alu 0 313 1 419 292 59 21 chr2 128505696 128505899 -122181955 + MIR SINE MIR 35 245 -17 228 237 17 17 chr2 128506454 128506513 -122181341 - MIR SINE MIR -69 139 81 1796 132 26 0 chr2 128506637 128506947 -122180907 - L1M3 LINE L1 -378 5793 5476 264 256 11 0 chr2 128507683 128507960 -122179894 + (TG)n Simple_repeat Simple_repeat 1 280 0 335 291 10 0 chr2 128507980 128508083 -122179771 + (TG)n Simple_repeat Simple_repeat 1 104 0 387 245 0 0 chr2 128508096 128508259 -122179595 + (TG)n Simple_repeat Simple_repeat 1 163 0 459 220 0 0 chr2 128508330 128508657 -122179197 + (TG)n Simple_repeat Simple_repeat 1 327 0 623 270 111 26 chr2 128508716 128508986 -122178868 - MLT1I LTR MaLR -16 393 101 248 348 67 33 chr2 128509316 128509526 -122178328 + MIR SINE MIR 11 227 -35 319 231 22 33 chr2 128509589 128509680 -122178174 + MIR SINE MIR 60 149 -113 477 219 88 9 chr2 128510642 128510756 -122177098 - MER70B LTR ERVL -102 476 354 1762 154 42 3 chr2 128510860 128511171 -122176683 - MER70A LTR ERVL -149 323 1 1285 272 112 14 chr2 128511530 128511619 -122176235 + L2 LINE L2 1184 1263 -2051 1491 185 77 6 chr2 128511619 128511932 -122175922 - MER58B DNA MER1_type -4 337 3 1285 272 112 14 chr2 128511932 128512353 -122175501 + L2 LINE L2 1263 1744 -1570 2913 154 18 22 chr2 128512374 128512921 -122174933 - LTR10A LTR ERV1 -64 545 1 281 255 75 32 chr2 128512921 128513015 -122174839 + L2 LINE L2 1740 1837 -1477 4691 239 90 45 chr2 128513025 128514712 -122173142 - L1ME2 LINE L1 -2 6231 4621 2243 148 60 45 chr2 128514712 128515033 -122172821 - MSTC LTR MaLR -4 424 94 2317 112 0 3 chr2 128515033 128515338 -122172516 - AluSg SINE Alu -6 304 1 2243 148 60 45 chr2 128515338 128515434 -122172420 - MSTC LTR MaLR -334 94 1 4691 239 90 45 chr2 128515434 128515851 -122172003 - L1ME2 LINE L1 -1612 4621 4224 1998 64 143 0 chr2 128515851 128516116 -122171738 - AluY SINE Alu -8 303 1 4691 239 90 45 chr2 128516116 128516230 -122171624 - L1ME2 LINE L1 -2009 4224 4117 1619 75 45 45 chr2 128516230 128516381 -122171473 - L1MA2 LINE L1 0 6304 6151 2598 44 3 0 chr2 128516381 128516678 -122171176 - AluY SINE Alu -13 298 1 1619 75 45 45 chr2 128516678 128516793 -122171061 - L1MA2 LINE L1 -152 6152 6038 4691 239 90 45 chr2 128516793 128517374 -122170480 - L1ME2 LINE L1 -2116 4117 3323 23089 144 8 15 chr2 128517487 128522624 -122165230 - L1P3 LINE L1 -1290 5171 5 1843 237 93 2 chr2 128522632 128523126 -122164728 + MLT1F1 LTR MaLR 29 567 0 1144 276 126 58 chr2 128523132 128523343 -122164511 - L1ME2 LINE L1 -4124 2272 2077 195 42 0 0 chr2 128523343 128523367 -122164487 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2044 152 0 3 chr2 128523370 128523672 -122164182 - AluSx SINE Alu -11 301 1 1144 276 126 58 chr2 128523672 128524922 -122162932 - L1ME2 LINE L1 -4320 2076 707 517 233 75 8 chr2 128525125 128525258 -122162596 - MLT1G LTR MaLR 0 590 449 * 626 210 49 0 chr2 128525255 128525398 -122162456 - MLT1G1 LTR MaLR -445 150 1 381 363 48 7 chr2 128525497 128525767 -122162087 - L1ME2 LINE L1 -6024 372 92 306 303 61 0 chr2 128525929 128526028 -122161826 - L2 LINE L2 0 3272 3168 553 310 26 40 chr2 128526033 128526259 -122161595 - MIR SINE MIR -38 224 2 268 220 34 0 chr2 128527568 128527627 -122160227 - MIR SINE MIR -90 118 58 226 236 118 39 chr2 128528845 128528972 -122158882 + MIR SINE MIR 12 148 -114 577 319 70 15 chr2 128529527 128529800 -122158054 + MLT1I LTR MaLR 122 409 0 185 300 0 0 chr2 128530522 128530572 -122157282 + MIR SINE MIR 201 250 -12 186 170 0 64 chr2 128531127 128531174 -122156680 + MIR SINE MIR 219 262 0 300 265 144 0 chr2 128531245 128531377 -122156477 - MIR SINE MIR -41 221 71 2160 129 3 13 chr2 128531380 128531691 -122156163 + AluSx SINE Alu 2 309 -3 906 222 112 84 chr2 128532187 128532668 -122155186 - MLT1G LTR MaLR -106 484 1 679 251 38 62 chr2 128535210 128535501 -122152353 + MER21B LTR ERV1 141 424 -439 2347 120 0 3 chr2 128535658 128535967 -122151887 - AluSx SINE Alu -4 308 1 720 235 81 19 chr2 128536063 128536323 -122151531 - HAL1 LINE L1 -1240 1267 992 1028 120 0 0 chr2 128538320 128538462 -122149392 + AluSg/x SINE Alu 171 312 0 193 368 65 32 chr2 128538837 128538992 -122148862 + L2 LINE L2 2894 3053 -219 376 238 134 63 chr2 128539724 128540165 -122147689 + LTR33 LTR ERVL 35 506 -15 210 279 101 70 chr2 128540733 128541020 -122146834 - L2 LINE L2 -160 3112 2817 323 303 126 40 chr2 128542373 128542571 -122145283 + L1ME LINE L1 858 1072 -5300 1574 194 49 47 chr2 128542586 128542951 -122144903 + L1MC/D LINE L1 4900 5280 -907 2452 83 0 0 chr2 128542951 128543253 -122144601 + AluY SINE Alu 1 302 -9 1574 194 49 47 chr2 128543253 128543419 -122144435 + L1MC/D LINE L1 5280 5444 -743 243 241 114 0 chr2 128543926 128544005 -122143849 - MIR SINE MIR -66 196 109 273 336 50 8 chr2 128545429 128545548 -122142306 - MIR SINE MIR -92 170 47 480 303 123 11 chr2 128545906 128546183 -122141671 - L2 LINE L2 -360 2954 2647 851 265 86 0 chr2 128546479 128546724 -122141130 + HAL1 LINE L1 3 268 -2239 471 271 11 58 chr2 128546731 128546919 -122140935 + MER97c DNA MER1_type? 1 179 -911 2307 189 11 27 chr2 128547253 128547773 -122140081 + MER74A LTR ERVL 1 512 -46 871 163 12 12 chr2 128547991 128548151 -122139703 + MER74A LTR ERVL 385 544 -14 1845 132 35 35 chr2 128548151 128548439 -122139415 - AluSx SINE Alu -14 298 11 1647 194 140 9 chr2 128548670 128549107 -122138747 - LTR54B LTR ERV1 -2 496 3 256 298 81 32 chr2 128550500 128550624 -122137230 - L2 LINE L2 -4 3268 3139 280 183 17 0 chr2 128551505 128551565 -122136289 - MLT1H LTR MaLR 0 549 489 1282 154 6 126 chr2 128553342 128553667 -122134187 - MLT1B LTR MaLR -104 286 1 256 350 14 14 chr2 128554173 128554316 -122133538 + L2 LINE L2 2907 3049 -223 785 256 158 35 chr2 128554852 128555219 -122132635 + LTR16A1 LTR ERVL 12 423 -34 429 275 9 8 chr2 128555221 128555362 -122132492 + L1ME LINE L1 1547 1882 -861 1384 181 10 109 chr2 128555368 128555771 -122132083 + MLT1A1 LTR MaLR 3 365 0 371 253 93 79 chr2 128556132 128556539 -122131315 + L1ME LINE L1 2406 2818 -3564 263 322 11 11 chr2 128557027 128557117 -122130737 - MIR SINE MIR -13 249 160 342 223 77 4 chr2 128557441 128557587 -122130267 - L1ME3 LINE L1 -10 6160 5993 239 148 172 0 chr2 128557616 128557674 -122130180 + MLT1B LTR MaLR 10 64 -310 2977 148 35 11 chr2 128557674 128558194 -122129660 - Tigger3b DNA MER2_type 0 1232 701 4462 130 15 16 chr2 128558225 128558956 -122128898 - L1MA4A LINE L1 -60 6945 6216 4726 178 5 8 chr2 128558957 128559844 -122128010 - L1MA4A LINE L1 -1007 5841 4958 6017 111 23 14 chr2 128559948 128560811 -122127043 + THE1C-int LTR MaLR 710 1580 0 2203 122 26 32 chr2 128560811 128561188 -122126666 + THE1C LTR MaLR 1 375 0 16294 182 23 21 chr2 128561188 128562366 -122125488 - L1MA4A LINE L1 -2464 4384 3210 1908 164 3 0 chr2 128562366 128562677 -122125177 - AluSx SINE Alu 0 312 1 16294 182 23 21 chr2 128562677 128565868 -122121986 - L1MA4A LINE L1 -3638 3210 4 2242 168 99 0 chr2 128566002 128566396 -122121458 - Tigger3b DNA MER2_type -782 449 17 1159 215 18 67 chr2 128566393 128566723 -122121131 + MLT1B LTR MaLR 77 390 0 * 281 264 62 16 chr2 128567472 128567601 -122120253 + MIR3 SINE MIR 22 156 -52 1294 162 63 44 chr2 128567927 128568242 -122119612 - MER44D DNA MER2_type -9 600 10 364 324 89 24 chr2 128568430 128568677 -122119177 - L2 LINE L2 -830 2484 2222 620 306 44 20 chr2 128569374 128569668 -122118186 - L1MC4a LINE L1 -1881 5927 5627 558 243 20 7 chr2 128569882 128570034 -122117820 - LTR16A LTR ERVL -4 446 293 522 239 87 0 chr2 128570143 128570281 -122117573 - LTR16A LTR ERVL -300 150 1 275 259 164 9 chr2 128570489 128570605 -122117249 + MIR SINE MIR 104 237 -25 985 194 11 5 chr2 128571086 128571272 -122116582 + MER5A DNA MER1_type 3 189 0 807 282 109 18 chr2 128572745 128573131 -122114723 + MLT1J2 LTR MaLR 17 437 -13 1584 221 118 94 chr2 128573214 128573932 -122113922 - LTR1B LTR ERV1 -39 981 52 848 296 42 94 chr2 128574165 128574464 -122113390 - MER34 LTR ERV1 -29 513 253 3197 115 60 60 chr2 128574464 128574886 -122112968 + MER4A LTR ERV1 1 425 -175 2376 66 0 3 chr2 128574886 128575190 -122112664 - AluY SINE Alu -8 303 1 3197 115 60 60 chr2 128575190 128575367 -122112487 + MER4A LTR ERV1 424 600 0 848 296 42 94 chr2 128575367 128575608 -122112246 - MER34 LTR ERV1 -289 253 1 245 352 88 0 chr2 128575609 128575768 -122112086 + MIR SINE MIR 86 258 -4 272 322 100 53 chr2 128576326 128576686 -122111168 - L3 LINE CR1 -67 1510 1134 953 192 23 0 chr2 128576696 128576873 -122110981 - L1MC1 LINE L1 0 6333 6153 2250 153 131 12 chr2 128576901 128577313 -122110541 + LOR1b LTR ERV1 1 461 0 981 178 6 0 chr2 128577799 128577968 -122109886 - L1MC1 LINE L1 -176 6157 5988 865 256 45 44 chr2 128577968 128578351 -122109503 - MER39 LTR ERV1 0 653 182 21 0 0 0 chr2 128578391 128578412 -122109442 + AT_rich Low_complexity Low_complexity 1 21 0 1749 235 70 79 chr2 128578829 128579548 -122108306 + MER72 LTR ERV1 1 712 -10 869 221 0 11 chr2 128581068 128581249 -122106605 + MIR SINE MIR 14 192 -70 216 192 101 20 chr2 128581791 128581864 -122105990 + MIR3 SINE MIR 113 194 -14 1539 254 129 4 chr2 128582520 128583031 -122104823 - L1ME1 LINE L1 -2 6164 5590 1978 157 22 40 chr2 128583031 128583401 -122104453 + LTR39 LTR ERV1 1 363 -420 275 178 31 0 chr2 128583409 128583475 -122104379 + AluJ/FLAM SINE Alu 23 69 -233 1654 136 0 8 chr2 128583485 128583742 -122104112 + AluSq SINE Alu 1 255 -58 1987 221 13 2 chr2 128583755 128584148 -122103706 + LTR39 LTR ERV1 351 747 -36 498 229 0 9 chr2 128584154 128584265 -122103589 - L1ME1 LINE L1 -563 5601 5505 2703 259 96 47 chr2 128584289 128584875 -122102979 - L1ME1 LINE L1 -1743 4403 3847 254 73 24 0 chr2 128584875 128584916 -122102938 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 2703 259 96 47 chr2 128584916 128585210 -122102644 - L1ME1 LINE L1 -2299 3847 3569 2318 76 0 13 chr2 128585210 128585514 -122102340 - AluY SINE Alu -11 300 1 2703 259 96 47 chr2 128585514 128585652 -122102202 - L1ME1 LINE L1 -2577 3569 3439 2439 205 26 55 chr2 128585652 128586307 -122101547 + MER92B LTR ERV1 1 636 0 2703 259 96 47 chr2 128586307 128586843 -122101011 - L1ME1 LINE L1 -2707 3439 2678 2064 241 35 31 chr2 128586847 128587358 -122100496 + LTR40a LTR ERVL 7 519 0 455 290 21 16 chr2 128587360 128587546 -122100308 - L1ME1 LINE L1 -3465 2681 2495 526 202 39 47 chr2 128587547 128587580 -122100274 - FLAM_A SINE Alu -170 141 109 2119 117 5 61 chr2 128587580 128587956 -122099898 + THE1A LTR MaLR 1 355 0 526 202 39 47 chr2 128587956 128588051 -122099803 - FLAM_A SINE Alu -202 109 14 730 194 56 10 chr2 128588113 128588309 -122099545 - L1ME1 LINE L1 -3705 2441 2237 1297 289 93 65 chr2 128588395 128589658 -122098196 + L1M4 LINE L1 3 1301 -5241 6530 83 6 14 chr2 128589663 128590529 -122097325 + L1P3 LINE L1 2 860 -5601 2326 151 96 2 chr2 128590532 128590982 -122096872 + L1MB4 LINE L1 5677 6168 -12 6408 80 8 26 chr2 128591021 128592240 -122095614 - L1PA8A LINE L1 -3 6128 4913 233 273 45 83 chr2 128592371 128592503 -122095351 - MLT1K LTR MaLR -8 580 454 394 297 43 8 chr2 128592932 128593104 -122094750 + MIR SINE MIR 10 189 -65 409 243 66 32 chr2 128594000 128594154 -122093700 + MIR SINE MIR 94 256 -6 297 133 43 101 chr2 128594854 128594978 -122092876 + MLT1H LTR MaLR 282 548 -1 1670 177 72 4 chr2 128595659 128596113 -122091741 - L1MB3 LINE L1 -10 6173 5646 491 316 110 5 chr2 128596258 128596467 -122091387 - MIR SINE MIR 0 262 32 1568 174 192 13 chr2 128597895 128597990 -122089864 + LOR1b LTR ERV1 1 78 -383 1983 91 11 0 chr2 128597990 128598264 -122089590 + AluSx SINE Alu 25 301 -11 1568 174 192 13 chr2 128598264 128598559 -122089295 + LOR1b LTR ERV1 78 461 0 313 348 19 19 chr2 128601458 128601616 -122086238 + MLT1J2 LTR MaLR 282 439 -11 1088 243 135 25 chr2 128602960 128603368 -122084486 - MLT1J LTR MaLR -58 453 1 673 282 115 50 chr2 128603424 128603906 -122083948 + L2 LINE L2 2782 3307 -6 323 326 82 0 chr2 128604384 128604531 -122083323 + MIR3 SINE MIR 34 192 -16 183 80 0 0 chr2 128604986 128605011 -122082843 + (GA)n Simple_repeat Simple_repeat 2 26 0 364 232 36 57 chr2 128605241 128605435 -122082419 + L1MD1 LINE L1 3426 3615 -2531 1633 255 91 6 chr2 128605459 128605988 -122081866 + L1MD1 LINE L1 3829 4402 -1744 1536 233 111 14 chr2 128606067 128606509 -122081345 - MLT1E2 LTR MaLR -4 622 138 783 208 27 123 chr2 128606680 128606973 -122080881 - MLT1E2-int LTR MaLR 0 1371 1107 3744 190 58 17 chr2 128607017 128607918 -122079936 + L1MD1 LINE L1 5127 6076 -166 2364 173 84 11 chr2 128607918 128608105 -122079749 + LTR44 LTR ERV1 1 173 -346 1307 111 62 37 chr2 128608105 128608230 -122079624 - L1PA16 LINE L1 -6 6160 6040 331 38 38 0 chr2 128608230 128608283 -122079571 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 2141 103 0 0 chr2 128608283 128608565 -122079289 - AluSx SINE Alu -30 282 1 1307 111 62 37 chr2 128608565 128608681 -122079173 - L1PA16 LINE L1 -125 6041 5912 2364 173 84 11 chr2 128608681 128608967 -122078887 + LTR44 LTR ERV1 173 509 -10 585 143 150 0 chr2 128608967 128609100 -122078754 + L1MD1 LINE L1 6082 6234 -8 2061 270 74 80 chr2 128609101 128610304 -122077550 + MLT1J2-int LTR MaLR 43 1238 -133 1303 195 44 30 chr2 128610304 128610601 -122077253 - AluJb SINE Alu -11 301 1 708 186 0 0 chr2 128610602 128610726 -122077128 - AluJo SINE Alu -178 134 11 427 271 23 8 chr2 128610779 128610912 -122076942 + MLT1J2-int LTR MaLR 1237 1371 0 293 225 50 15 chr2 128610912 128611119 -122076735 + MLT1E2 LTR MaLR 1 223 -401 1789 209 71 79 chr2 128611140 128611243 -122076611 - L1MDb LINE L1 -2829 3711 3609 1714 146 22 0 chr2 128611243 128611518 -122076336 + AluSx SINE Alu 9 289 -23 1789 209 71 79 chr2 128611518 128612028 -122075826 - L1MDb LINE L1 -2931 3609 3096 1983 134 0 13 chr2 128612028 128612335 -122075519 + AluSx SINE Alu 1 303 -9 1920 132 14 0 chr2 128612345 128612632 -122075222 + AluSx SINE Alu 9 302 -10 255 93 0 0 chr2 128612632 128612675 -122075179 + (CA)n Simple_repeat Simple_repeat 2 44 0 1789 209 71 79 chr2 128612682 128612799 -122075055 - L1MDb LINE L1 -3453 3087 2975 1614 220 3 13 chr2 128612775 128613162 -122074692 - L1MDb LINE L1 -5127 1416 1034 * 1026 212 96 99 chr2 128613621 128614179 -122073675 - MER34B LTR ERV1 0 542 9 861 269 132 32 chr2 128614186 128614685 -122073169 - L1MDb LINE L1 -5980 560 12 1696 81 4 8 chr2 128614691 128614925 -122072929 - AluSc SINE Alu -12 297 65 290 87 43 22 chr2 128614937 128614983 -122072871 - MLT1E3-int LTR MaLR -1324 47 1 1709 200 90 49 chr2 128614983 128615449 -122072405 - MLT1E3 LTR MaLR 0 624 140 405 288 130 0 chr2 128615556 128615702 -122072152 - MER63 DNA MER1_type -42 1646 4 2247 247 33 33 chr2 128615705 128616398 -122071456 + L1ME3A LINE L1 4418 5110 -1036 2144 93 7 0 chr2 128616398 128616688 -122071166 + AluSg SINE Alu 1 292 -18 2154 49 3 14 chr2 128616690 128617021 -122070833 + AluY SINE Alu 1 328 0 2247 247 33 33 chr2 128617021 128617108 -122070746 + L1ME3A LINE L1 5110 5202 -944 225 0 0 0 chr2 128617113 128617138 -122070716 + (A)n Simple_repeat Simple_repeat 1 25 0 2979 168 24 0 chr2 128617138 128617651 -122070203 - MER34 LTR ERV1 -8 534 9 996 207 52 38 chr2 128617651 128618039 -122069815 + L1ME3A LINE L1 5202 5638 -526 2193 104 0 0 chr2 128618077 128618375 -122069479 + AluSx SINE Alu 1 298 -14 1680 163 45 30 chr2 128618426 128618757 -122069097 + LTR39 LTR ERV1 1 336 -447 2718 174 0 18 chr2 128618904 128619409 -122068445 - LTR60 LTR ERV1 -90 496 1 2388 193 37 2 chr2 128619409 128619839 -122068015 + LTR39 LTR ERV1 331 775 -8 249 0 0 0 chr2 128619834 128619861 -122067993 - LTR60 LTR ERV1 -393 193 167 * 1545 112 28 48 chr2 128619879 128620130 -122067724 + AluSx SINE Alu 1 246 -66 5137 70 15 11 chr2 128620130 128620218 -122067636 + PABL_A LTR ERV1 1 87 -573 2106 92 0 0 chr2 128620218 128620502 -122067352 + L1PA8 LINE L1 5887 6170 -2 5137 70 15 11 chr2 128620502 128621070 -122066784 + PABL_A LTR ERV1 87 660 0 376 100 17 0 chr2 128621070 128621130 -122066724 + AluSp/q SINE Alu 243 303 0 653 237 53 0 chr2 128621132 128621322 -122066532 + L1ME3A LINE L1 5754 5953 -217 315 265 29 29 chr2 128621336 128621438 -122066416 + L1MC5 LINE L1 7589 7690 -271 270 0 0 0 chr2 128621518 128621548 -122066306 + (TG)n Simple_repeat Simple_repeat 2 31 0 254 266 28 28 chr2 128621692 128621801 -122066053 + L1M4 LINE L1 5122 5230 -916 222 105 0 0 chr2 128622033 128622071 -122065783 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 226 308 77 39 chr2 128622754 128622858 -122064996 - L2 LINE L2 -11 3261 3154 263 244 0 13 chr2 128622917 128622995 -122064859 + L1M4 LINE L1 4433 4509 -1637 1529 191 101 34 chr2 128623087 128623475 -122064379 - MLT2D LTR ERVL 0 414 1 804 183 0 0 chr2 128623501 128623632 -122064222 + FLAM_C SINE Alu 1 131 -2 1116 224 63 8 chr2 128623653 128623921 -122063933 - MLT1C LTR MaLR -76 391 109 1727 136 20 48 chr2 128623950 128624211 -122063643 + Tigger3(Golem) DNA MER2_type 1 255 -976 2121 95 3 0 chr2 128624211 128624496 -122063358 + AluSq SINE Alu 21 306 -7 1727 136 20 48 chr2 128624496 128624528 -122063326 + Tigger3(Golem) DNA MER2_type 255 286 -945 727 263 101 86 chr2 128624612 128625353 -122062501 + L1M4 LINE L1 3863 4614 -1532 252 253 11 11 chr2 128625941 128626032 -122061822 + L1M4 LINE L1 4622 4712 -1434 188 242 103 67 chr2 128626130 128626295 -122061559 + L2 LINE L2 3032 3202 -111 538 222 12 42 chr2 128626300 128626322 -122061532 + L1M4 LINE L1 2376 2397 -3749 2359 125 23 10 chr2 128626322 128626707 -122061147 + MLT1B LTR MaLR 1 390 0 538 222 12 42 chr2 128626707 128626851 -122061003 + L1M4 LINE L1 2397 2537 -3609 747 103 0 0 chr2 128626858 128626955 -122060899 - AluSx SINE Alu -22 290 194 1055 106 0 0 chr2 128626956 128627097 -122060757 - AluSx SINE Alu -172 141 1 365 224 20 0 chr2 128627099 128627197 -122060657 + L1M4 LINE L1 2534 2633 -3513 1143 181 24 5 chr2 128627204 128627409 -122060445 - MER20 DNA MER1_type -4 215 7 449 206 168 26 chr2 128627445 128627600 -122060254 + L1M4 LINE L1 2678 2854 -3292 2844 234 149 18 chr2 128627607 128627965 -122059889 + L1M4 LINE L1 2936 3246 -2900 4176 143 77 37 chr2 128627965 128628718 -122059136 + LTR39 LTR ERV1 1 783 0 2844 234 149 18 chr2 128628718 128629223 -122058631 + L1M4 LINE L1 3246 3683 -2463 2366 72 3 0 chr2 128629223 128629528 -122058326 - AluY SINE Alu -5 306 1 2844 234 149 18 chr2 128629528 128629887 -122057967 + L1M4 LINE L1 3683 4320 -1826 723 234 6 0 chr2 128629920 128629939 -122057915 - L1MA10 LINE L1 -1 6333 6315 1757 215 80 19 chr2 128629939 128630414 -122057440 - L1ME1 LINE L1 -11 6155 5652 247 240 0 31 chr2 128630402 128630498 -122057356 + L1M4 LINE L1 4323 4415 -1731 * 224 261 0 31 chr2 128630810 128630875 -122056979 + GA-rich Low_complexity Low_complexity 2 64 0 417 162 0 0 chr2 128630996 128631070 -122056784 - L1MB2 LINE L1 -2 6169 6096 2402 148 10 22 chr2 128631070 128631338 -122056516 - L1MB2 LINE L1 -445 5738 5475 691 50 10 10 chr2 128631338 128631439 -122056415 + (TAGA)n Simple_repeat Simple_repeat 3 103 0 2402 148 10 22 chr2 128631439 128631582 -122056272 - L1MB2 LINE L1 -708 5475 5332 242 67 0 0 chr2 128631591 128631621 -122056233 - L1MB2 LINE L1 -819 5361 5332 697 126 76 8 chr2 128631622 128631741 -122056113 - MLT1A2 LTR MaLR -1 373 247 4913 246 37 86 chr2 128631749 128633978 -122053876 - L1MB2 LINE L1 -810 5336 3218 464 162 9 185 chr2 128634724 128634946 -122052908 + LTR38B LTR ERV1 1 183 -427 659 171 18 0 chr2 128635563 128635674 -122052180 - MER81 DNA DNA 0 114 2 411 281 175 0 chr2 128635968 128636139 -122051715 - MIR SINE MIR -34 228 28 290 224 0 7 chr2 128636286 128636429 -122051425 + GA-rich Low_complexity Low_complexity 1 142 0 930 156 0 0 chr2 128636525 128636666 -122051188 + AluJb SINE Alu 128 268 -44 415 123 0 0 chr2 128636693 128636750 -122051104 + MER34 LTR ERV1 12 68 -474 649 96 0 0 chr2 128636756 128636839 -122051015 + AluSg SINE Alu 8 90 -220 471 291 55 18 chr2 128637950 128638115 -122049739 + MIR SINE MIR 73 243 -19 405 304 0 8 chr2 128638298 128638423 -122049431 - MER117 DNA MER1_type -69 128 5 269 250 44 44 chr2 128638779 128638915 -122048939 + LTR16C LTR ERVL 313 448 -43 825 201 33 86 chr2 128639986 128640290 -122047564 + MER96B DNA MER1_type? 130 417 0 304 135 39 0 chr2 128640514 128640566 -122047288 + U7 snRNA snRNA 10 63 0 1736 213 35 14 chr2 128640736 128641103 -122046751 - LTR39 LTR ERV1 0 783 409 362 0 0 0 chr2 128641103 128641145 -122046709 + L1P3 LINE L1 5647 5688 -466 1667 39 0 15 chr2 128641158 128641363 -122046491 + L1PA8 LINE L1 5963 6164 -8 1813 196 48 41 chr2 128641368 128641787 -122046067 - LTR39 LTR ERV1 -361 422 1 420 259 14 68 chr2 128642120 128642267 -122045587 - MIR SINE MIR -71 191 53 213 361 132 14 chr2 128642612 128642756 -122045098 - L2 LINE L2 -435 2879 2719 407 287 105 58 chr2 128642770 128642904 -122044950 - L2 LINE L2 -724 2590 2464 2231 81 14 0 chr2 128642904 128643200 -122044654 + AluSp SINE Alu 1 300 -13 407 287 105 58 chr2 128643200 128643427 -122044427 - L2 LINE L2 -850 2464 2212 184 229 131 0 chr2 128643890 128643951 -122043903 - MIR SINE MIR -68 194 126 403 325 79 36 chr2 128644475 128644752 -122043102 - L1MC5 LINE L1 -158 7803 7515 1853 120 65 0 chr2 128644755 128645031 -122042823 - AluSq SINE Alu -19 294 1 540 198 160 59 chr2 128645055 128645242 -122042612 - MER3 DNA MER1_type -3 206 1 306 248 39 6 chr2 128645288 128645444 -122042410 - L1MC4 LINE L1 -465 7577 7315 2036 146 0 0 chr2 128645594 128645903 -122041951 - AluSx SINE Alu -3 309 1 790 269 157 59 chr2 128646366 128646574 -122041280 + L1MC4 LINE L1 5753 5939 -1954 1954 176 28 16 chr2 128646574 128646938 -122040916 - MLT1A2 LTR MaLR -4 370 3 790 269 157 59 chr2 128646938 128647738 -122040116 + L1MC4 LINE L1 5939 6948 -945 458 230 97 133 chr2 128649266 128649412 -122038442 - MER5C DNA MER1_type 0 324 174 2054 98 20 3 chr2 128649412 128649707 -122038147 - AluSx SINE Alu -10 302 3 458 230 97 133 chr2 128649707 128649758 -122038096 - MER5C DNA MER1_type -150 174 123 249 57 0 0 chr2 128649758 128649793 -122038061 + (CAGG)n Simple_repeat Simple_repeat 2 36 0 458 230 97 133 chr2 128649793 128649903 -122037951 - MER5C DNA MER1_type -201 123 27 484 257 91 5 chr2 128650233 128650420 -122037434 - L1M4 LINE L1 -1305 4841 4639 281 98 0 20 chr2 128650432 128650483 -122037371 + (CA)n Simple_repeat Simple_repeat 2 51 0 1303 252 92 65 chr2 128650487 128650750 -122037104 + L1MC5 LINE L1 6876 7130 -831 818 158 0 0 chr2 128650750 128650870 -122036984 - FLAM_A SINE Alu -9 124 5 1303 252 92 65 chr2 128650870 128651647 -122036207 + L1MC5 LINE L1 7130 7926 -35 4004 70 2 6 chr2 128651679 128652196 -122035658 - L1PA8 LINE L1 -1 6171 5657 406 372 39 12 chr2 128652199 128652446 -122035408 + L1ME LINE L1 5197 5449 -754 292 274 21 11 chr2 128652464 128652559 -122035295 + L1ME LINE L1 5510 5605 -516 2478 160 146 126 chr2 128652570 128652885 -122034969 + L1MC3 LINE L1 6759 7066 -719 227 318 9 28 chr2 128652885 128652992 -122034862 + MLT1F1 LTR MaLR 21 125 -442 2478 160 146 126 chr2 128652992 128653407 -122034447 + L1MC3 LINE L1 7066 7622 -163 1775 182 0 0 chr2 128653407 128653703 -122034151 + AluJb SINE Alu 1 296 -16 2478 160 146 126 chr2 128653703 128653869 -122033985 + L1MC3 LINE L1 7622 7783 -2 336 264 111 0 chr2 128653866 128654010 -122033844 + L1ME LINE L1 5603 5762 -359 * 21 0 0 0 chr2 128654468 128654489 -122033365 + AT_rich Low_complexity Low_complexity 1 21 0 1984 74 0 19 chr2 128654489 128654746 -122033108 - AluY SINE Alu -59 252 1 444 208 19 0 chr2 128655355 128655461 -122032393 + LTR37A LTR ERV1 319 426 0 3437 119 67 2 chr2 128657339 128657834 -122030020 + MER1A DNA MER1_type 1 527 0 450 300 108 65 chr2 128658739 128659463 -122028391 + LTR49-int LTR ERV1 4641 5395 -936 2103 132 0 0 chr2 128659535 128659830 -122028024 + AluSx SINE Alu 1 295 -17 294 207 97 69 chr2 128660234 128660339 -122027515 + LTR37A LTR ERV1 278 379 -47 192 77 0 0 chr2 128660339 128660365 -122027489 + (TATATG)n Simple_repeat Simple_repeat 3 28 0 2024 144 0 0 chr2 128660366 128660657 -122027197 - AluSx SINE Alu -21 291 1 294 207 97 69 chr2 128660657 128660694 -122027160 + LTR37A LTR ERV1 378 426 0 226 297 84 32 chr2 128660698 128660853 -122027001 - MIR SINE MIR -75 187 25 193 333 17 0 chr2 128661910 128661970 -122025884 + L3 LINE CR1 455 515 -1062 947 179 6 17 chr2 128661983 128662162 -122025692 + FRAM SINE Alu 1 171 -5 192 219 24 0 chr2 128662273 128662314 -122025540 - MIR3 SINE MIR -45 163 122 2324 98 0 0 chr2 128662314 128662610 -122025244 + AluSx SINE Alu 1 296 -16 240 342 9 53 chr2 128662786 128662900 -122024954 + L3 LINE CR1 778 886 -691 317 289 142 40 chr2 128663767 128663900 -122023954 - MLT1L LTR MaLR -167 448 330 2299 106 0 0 chr2 128663900 128664212 -122023642 - AluSx SINE Alu 0 312 1 317 289 142 40 chr2 128664212 128664303 -122023551 - MLT1L LTR MaLR -285 330 201 304 200 0 0 chr2 128664270 128664330 -122023524 - MLT1J LTR MaLR -342 169 110 * 232 254 70 0 chr2 128664330 128664341 -122023513 - LTR67 LTR ERVL -383 174 99 241 289 33 22 chr2 128664346 128664436 -122023418 - MLT1L LTR MaLR -524 91 1 2027 87 31 0 chr2 128665366 128665652 -122022202 - AluSx SINE Alu 0 312 18 2157 98 0 55 chr2 128665660 128665987 -122021867 - AluSx SINE Alu -3 309 1 912 202 33 0 chr2 128666346 128666529 -122021325 - L1PA16 LINE L1 0 6166 5978 363 314 19 0 chr2 128666884 128667043 -122020811 + (CTCA)n Simple_repeat Simple_repeat 4 165 0 * 524 269 0 6 chr2 128666940 128667344 -122020510 + (CA)n Simple_repeat Simple_repeat 1 401 0 266 257 9 0 chr2 128667376 128667731 -122020123 + (CA)n Simple_repeat Simple_repeat 1 358 0 540 293 0 6 chr2 128667773 128667954 -122019900 + (CA)n Simple_repeat Simple_repeat 1 180 0 243 0 0 0 chr2 128668209 128668236 -122019618 + (CA)n Simple_repeat Simple_repeat 2 28 0 226 240 0 0 chr2 128670000 128670050 -122017804 + GA-rich Low_complexity Low_complexity 4 53 0 313 337 169 6 chr2 128670508 128670652 -122017202 + MIR SINE MIR 32 210 -52 2104 127 3 0 chr2 128670652 128670960 -122016894 + AluSq SINE Alu 3 311 -2 313 337 169 6 chr2 128670960 128670987 -122016867 + MIR SINE MIR 210 231 -31 253 218 12 91 chr2 128673276 128673472 -122014382 + GA-rich Low_complexity Low_complexity 1 180 0 195 288 15 45 chr2 128673872 128673938 -122013916 + MIR SINE MIR 72 135 -127 487 284 147 25 chr2 128674987 128675191 -122012663 + MIR SINE MIR 24 252 -10 260 235 108 12 chr2 128675973 128676068 -122011786 + MIR SINE MIR 41 144 -64 181 179 18 18 chr2 128677291 128677347 -122010507 + (CA)n Simple_repeat Simple_repeat 2 57 0 191 298 24 60 chr2 128677819 128677903 -122009951 + MER5A DNA MER1_type 10 90 -99 239 197 33 16 chr2 128681023 128681084 -122006770 + GA-rich Low_complexity Low_complexity 1 62 0 342 366 79 0 chr2 128681326 128681490 -122006364 + MIR SINE MIR 65 241 -21 231 36 0 0 chr2 128682451 128682479 -122005375 + (TG)n Simple_repeat Simple_repeat 1 28 0 668 225 6 35 chr2 128683086 128683259 -122004595 - MER3 DNA MER1_type -2 207 40 1845 166 7 0 chr2 128690027 128690335 -121997519 + AluJb SINE Alu 1 310 -2 201 278 124 56 chr2 128690873 128691031 -121996823 + MIR3 SINE MIR 13 191 -62 306 0 0 0 chr2 128692969 128693003 -121994851 + (CA)n Simple_repeat Simple_repeat 2 35 0 355 244 33 11 chr2 128693434 128693524 -121994330 + MIR SINE MIR 105 196 -66 357 288 102 34 chr2 128694960 128695078 -121992776 + MIR SINE MIR 25 150 -112 2209 109 0 3 chr2 128697930 128698234 -121989620 - AluSg SINE Alu -7 303 1 396 264 70 8 chr2 128698354 128698483 -121989371 + MIR SINE MIR 38 174 -88 330 198 35 86 chr2 128698603 128698719 -121989135 - MIR3 SINE MIR -22 186 77 189 0 0 0 chr2 128699602 128699623 -121988231 + (CCCCCT)n Simple_repeat Simple_repeat 2 22 0 206 32 32 0 chr2 128700549 128700580 -121987274 + (CA)n Simple_repeat Simple_repeat 1 32 0 212 346 12 0 chr2 128701569 128701650 -121986204 - L2 LINE L2 -172 3100 3019 282 254 246 0 chr2 128702503 128702617 -121985237 + MIR SINE MIR 109 250 -12 288 345 139 32 chr2 128702755 128703007 -121984847 + L2 LINE L2 2978 3256 -16 218 309 124 0 chr2 128703156 128703253 -121984601 + MIR SINE MIR 46 154 -108 206 160 80 0 chr2 128705219 128705269 -121982585 + (CAGG)n Simple_repeat Simple_repeat 1 54 0 749 273 39 106 chr2 128706190 128706313 -121981541 - L1MC4 LINE L1 -3 8039 7909 1521 184 53 10 chr2 128706313 128706612 -121981242 - AluJo SINE Alu 0 312 1 749 273 39 106 chr2 128706612 128707150 -121980704 - L1MC4 LINE L1 -133 7909 7422 219 283 0 0 chr2 128707408 128707461 -121980393 + MER5A DNA MER1_type 137 189 0 813 194 126 0 chr2 128707595 128707786 -121980068 - L1MC4 LINE L1 -1030 7012 6798 180 237 17 51 chr2 128709330 128709389 -121978465 + L2 LINE L2 1360 1416 -1898 * 269 272 212 20 chr2 128709339 128709482 -121978372 - MIR SINE MIR -63 145 22 2295 103 0 0 chr2 128709719 128710021 -121977833 - AluSg SINE Alu -6 304 3 313 302 105 57 chr2 128711511 128711671 -121976183 - L2 LINE L2 -11 3261 3110 1666 192 0 10 chr2 128711671 128711979 -121975875 + AluJo SINE Alu 1 305 -7 313 302 105 57 chr2 128711979 128712219 -121975635 - L2 LINE L2 -162 3110 2842 195 319 0 66 chr2 128712229 128712320 -121975534 - MIR SINE MIR -28 234 150 277 343 101 20 chr2 128712582 128712780 -121975074 - L2 LINE L2 -508 2806 2593 234 299 26 0 chr2 128712783 128712860 -121974994 - L2 LINE L2 -865 2449 2371 214 326 101 14 chr2 128713112 128713250 -121974604 + MIR SINE MIR 80 229 -33 204 224 12 94 chr2 128714225 128714310 -121973544 + L2 LINE L2 3024 3101 -171 1902 134 13 36 chr2 128714947 128715254 -121972600 + AluJo SINE Alu 1 300 -12 251 311 12 19 chr2 128715329 128715490 -121972364 + (CCCCAG)n Simple_repeat Simple_repeat 1 160 0 197 235 118 0 chr2 128715665 128715750 -121972104 + MIR SINE MIR 25 119 -89 1676 217 70 11 chr2 128716514 128717143 -121970711 + MER39 LTR ERV1 1 706 -1 530 294 67 21 chr2 128717415 128717609 -121970245 - MIR SINE MIR -59 203 1 189 259 59 59 chr2 128719049 128719134 -121968720 + MIR SINE MIR 106 190 -72 192 314 147 41 chr2 128721136 128721381 -121966473 + L2 LINE L2 2870 3140 -132 201 74 0 0 chr2 128722562 128722589 -121965265 + (TG)n Simple_repeat Simple_repeat 1 27 0 2307 70 0 0 chr2 128722717 128723028 -121964826 - AluSc SINE Alu 0 309 1 2240 68 3 7 chr2 128723028 128723321 -121964533 - AluSx SINE Alu -20 292 1 195 282 47 35 chr2 128723725 128723810 -121964044 + MIR SINE MIR 92 177 -85 294 286 86 17 chr2 128724108 128724252 -121963602 - MIR SINE MIR -41 167 40 567 243 62 7 chr2 128724724 128724868 -121962986 + L2 LINE L2 3161 3312 -1 344 310 142 7 chr2 128725210 128725365 -121962489 - MIR SINE MIR -6 256 81 217 312 86 48 chr2 128726305 128726491 -121961363 + MIR SINE MIR 35 227 -35 240 376 112 0 chr2 128727907 128728085 -121959769 - L2 LINE L2 -2 3270 3073 324 0 0 0 chr2 128729174 128729210 -121958644 + (TCC)n Simple_repeat Simple_repeat 3 38 0 195 114 0 0 chr2 128730807 128730842 -121957012 + (CGAG)n Simple_repeat Simple_repeat 1 35 0 23 33 0 0 chr2 128730883 128730913 -121956941 + GC_rich Low_complexity Low_complexity 1 30 0 362 246 149 18 chr2 128731429 128731543 -121956311 - MIR SINE MIR 0 262 134 198 344 73 0 chr2 128731977 128732073 -121955781 - MIR3 SINE MIR -24 184 82 1141 194 86 40 chr2 128732201 128732398 -121955456 + MER2 DNA MER2_type 6 192 -153 212 0 36 0 chr2 128732398 128732426 -121955428 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2190 83 0 0 chr2 128732428 128732706 -121955148 - AluSc SINE Alu -31 278 1 1141 194 86 40 chr2 128732706 128732830 -121955024 + MER2 DNA MER2_type 192 345 0 403 383 28 6 chr2 128733270 128733450 -121954404 + L1ME4a LINE L1 5725 5908 -213 29 0 0 0 chr2 128733453 128733482 -121954372 + AT_rich Low_complexity Low_complexity 1 29 0 2152 87 4 0 chr2 128733606 128733882 -121953972 + AluSp SINE Alu 21 297 -16 370 287 85 43 chr2 128734030 128734194 -121953660 + L1ME4a LINE L1 5950 6120 -1 491 320 125 54 chr2 128734266 128734563 -121953291 + L1ME4a LINE L1 5268 5585 -2223 280 280 104 37 chr2 128734577 128734845 -121953009 + L1ME4a LINE L1 5602 5887 -234 263 237 119 8 chr2 128734861 128734979 -121952875 + L1ME4a LINE L1 5989 6119 -2 5664 137 28 11 chr2 128735149 128735161 -121952693 - L1MC1 LINE L1 -1 6332 6322 1700 82 0 0 chr2 128735161 128735381 -121952473 - AluSq SINE Alu -7 306 87 5664 137 28 11 chr2 128735381 128736257 -121951597 - L1MC1 LINE L1 -11 6322 5429 1859 160 20 7 chr2 128736858 128737164 -121950690 + AluJb SINE Alu 1 310 -2 241 291 200 6 chr2 128737169 128737334 -121950520 + MIR SINE MIR 62 258 -4 629 257 68 44 chr2 128737553 128737849 -121950005 + MLT1K LTR MaLR 286 588 0 1935 168 0 0 chr2 128737866 128738176 -121949678 - AluSx SINE Alu -2 310 1 362 208 73 0 chr2 128738301 128738397 -121949457 + MER94 DNA DNA 23 125 -9 2207 122 0 3 chr2 128738784 128739096 -121948758 + AluSx SINE Alu 1 311 -1 2460 196 14 2 chr2 128739958 128740387 -121947467 + Tigger2a DNA MER2_type 1 434 0 749 246 46 29 chr2 128740411 128740436 -121947418 + L1ME LINE L1 5127 5150 -1014 2520 33 0 58 chr2 128740436 128740766 -121947088 - AluY SINE Alu 0 311 1 749 246 46 29 chr2 128740766 128741137 -121946717 + L1ME LINE L1 5150 5529 -635 269 265 19 86 chr2 128741444 128741606 -121946248 + L2 LINE L2 2962 3112 -160 199 301 97 0 chr2 128741858 128741951 -121945903 + L2 LINE L2 3154 3255 -17 6443 73 22 65 chr2 128742592 128744191 -121943663 - SVA Other Other -518 1386 393 230 287 30 30 chr2 128745252 128745353 -121942501 - L2 LINE L2 -54 3259 3159 1627 120 23 108 chr2 128746623 128746965 -121940889 - AluYb8 SINE Alu -5 313 1 3700 217 26 53 chr2 128746996 128747190 -121940664 - L1MD1 LINE L1 -12 6230 6032 5097 56 21 30 chr2 128747190 128747274 -121940580 - PABL_A LTR ERV1 -2 658 575 1953 103 0 4 chr2 128747274 128747547 -121940307 - AluY SINE Alu -5 306 35 5097 56 21 30 chr2 128747547 128747647 -121940207 - PABL_A LTR ERV1 -85 575 476 2130 129 3 0 chr2 128747647 128747949 -121939905 - AluSq SINE Alu -10 303 1 5097 56 21 30 chr2 128747949 128748427 -121939427 - PABL_A LTR ERV1 -184 476 1 3700 217 26 53 chr2 128748427 128748573 -121939281 - L1MD1 LINE L1 -210 6032 5884 2185 109 0 0 chr2 128748573 128748866 -121938988 + AluSx SINE Alu 1 293 -19 1884 167 0 7 chr2 128748874 128749174 -121938680 + AluJo SINE Alu 1 298 -14 3700 217 26 53 chr2 128749174 128750425 -121937429 - L1MD1 LINE L1 -365 5877 4674 1246 284 66 50 chr2 128750567 128751173 -121936681 + MER21B LTR ERV1 141 756 -107 22 35 0 0 chr2 128751237 128751266 -121936588 + AT_rich Low_complexity Low_complexity 1 29 0 1521 242 51 6 chr2 128751267 128751928 -121935926 - L1MD1 LINE L1 -1493 4653 3697 284 350 84 10 chr2 128751984 128752187 -121935667 - MLT1L LTR MaLR -38 577 360 269 286 14 0 chr2 128752291 128752361 -121935493 - MLT1J LTR MaLR -331 180 110 811 291 46 95 chr2 128752865 128753055 -121934799 - L1MC4 LINE L1 -15 8027 7829 1965 144 0 3 chr2 128753055 128753368 -121934486 + AluSx SINE Alu 1 312 0 811 291 46 95 chr2 128753368 128754358 -121933496 - L1MC4 LINE L1 -213 7829 6827 267 103 0 0 chr2 128754434 128754473 -121933381 + (TA)n Simple_repeat Simple_repeat 1 39 0 1571 207 24 3 chr2 128754476 128754810 -121933044 - MLT2C1 LTR ERVL -56 341 1 1469 171 81 22 chr2 128754850 128755180 -121932674 + MLT1A1 LTR MaLR 4 421 -7 523 312 112 48 chr2 128755185 128755454 -121932400 - L1MC4a LINE L1 -1213 6595 6310 23 0 0 0 chr2 128755893 128755916 -121931938 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 128755922 128755943 -121931911 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr2 128756133 128756170 -121931684 + (T)n Simple_repeat Simple_repeat 1 37 0 2353 55 41 3 chr2 128756295 128756587 -121931267 + AluY SINE Alu 1 303 -8 410 250 86 119 chr2 128757273 128757377 -121930477 + MLT1L LTR MaLR 99 205 -410 1934 167 0 22 chr2 128757377 128757695 -121930159 - AluJb SINE Alu 0 312 2 410 250 86 119 chr2 128757695 128757833 -121930021 + MLT1L LTR MaLR 205 416 -199 294 156 0 0 chr2 128758320 128758384 -121929470 + GA-rich Low_complexity Low_complexity 2 65 0 452 258 77 26 chr2 128759177 128759332 -121928522 - MIR SINE MIR -18 244 82 706 238 43 5 chr2 128759442 128759652 -121928202 + Charlie8 DNA MER1_type 48 265 -2152 183 245 10 98 chr2 128760317 128760419 -121927435 - L2 LINE L2 -2797 517 425 302 263 86 50 chr2 128762491 128762689 -121925165 - L1M4 LINE L1 -1783 4432 4228 843 101 0 0 chr2 128762821 128762950 -121924904 + L1P LINE L1 4646 4774 -1372 638 310 105 28 chr2 128762954 128763364 -121924490 - L1MEc LINE L1 -3655 2560 2143 422 281 163 49 chr2 128763621 128764211 -121923643 - HAL1 LINE L1 -738 1769 1113 343 280 26 42 chr2 128765055 128765195 -121922659 - MIR SINE MIR -61 147 45 233 266 115 62 chr2 128765379 128765492 -121922362 - L2 LINE L2 -1 3271 3153 516 224 37 30 chr2 128765494 128765628 -121922226 - MIR SINE MIR -55 153 19 805 147 0 0 chr2 128765650 128765779 -121922075 - L1MA6 LINE L1 0 6300 6172 442 275 54 0 chr2 128765784 128765951 -121921903 - L1ME4a LINE L1 -2 6119 5944 315 297 90 14 chr2 128766393 128766538 -121921316 - L1ME4a LINE L1 -254 5867 5712 247 246 58 0 chr2 128766584 128766653 -121921201 + MIR SINE MIR 77 149 -113 1607 154 88 0 chr2 128767189 128767462 -121920392 + AluJo SINE Alu 1 297 -15 274 254 201 30 chr2 128767770 128767904 -121919950 - MIR SINE MIR 0 262 106 213 265 122 51 chr2 128768172 128768270 -121919584 - L2 LINE L2 0 3272 3168 260 242 0 0 chr2 128768293 128768355 -121919499 - HAL1 LINE L1 -932 1575 1514 807 159 149 10 chr2 128768363 128768558 -121919296 + MER119 DNA MER1_type 362 583 0 21 0 0 0 chr2 128768649 128768670 -121919184 + AT_rich Low_complexity Low_complexity 1 21 0 341 285 62 15 chr2 128768889 128769019 -121918835 + L1ME4a LINE L1 5984 6119 -2 206 286 0 0 chr2 128769184 128769233 -121918621 + GA-rich Low_complexity Low_complexity 6 54 0 280 266 0 13 chr2 128770285 128770364 -121917490 + MLT1K LTR MaLR 187 264 -324 287 122 20 0 chr2 128770556 128770605 -121917249 + MLT1K LTR MaLR 538 587 -1 194 227 15 30 chr2 128770767 128770833 -121917021 - L2 LINE L2 -208 3064 3000 1127 166 36 32 chr2 128771377 128771655 -121916199 - L1MB8 LINE L1 0 6178 5900 2471 91 3 0 chr2 128771656 128771964 -121915890 - AluSp SINE Alu -4 309 1 1975 166 62 0 chr2 128771965 128772350 -121915504 + L1MB8 LINE L1 5463 5871 -307 885 215 12 104 chr2 128772345 128772769 -121915085 - L1M4 LINE L1 -2991 3653 3269 * 5901 207 40 67 chr2 128772791 128773483 -121914371 - L1M4 LINE L1 -4464 2182 1473 2569 87 0 0 chr2 128773483 128773794 -121914060 - AluSp SINE Alu -1 312 2 5901 207 40 67 chr2 128773794 128774370 -121913484 - L1M4 LINE L1 -5173 1473 883 1896 168 30 0 chr2 128774370 128774667 -121913187 - AluSx SINE Alu -6 306 1 5901 207 40 67 chr2 128774667 128775601 -121912253 - L1M4 LINE L1 -5763 883 18 1417 177 12 110 chr2 128775602 128775930 -121911924 - AluJb SINE Alu -6 296 1 1900 133 35 18 chr2 128776702 128776988 -121910866 + AluSx SINE Alu 1 291 -21 2127 104 0 0 chr2 128776991 128777260 -121910594 + AluSq SINE Alu 28 296 -17 216 0 0 0 chr2 128777330 128777354 -121910500 + (GA)n Simple_repeat Simple_repeat 2 25 0 2106 152 0 3 chr2 128778548 128778857 -121908997 - AluSc SINE Alu -1 308 1 423 220 20 13 chr2 128779198 128779334 -121908520 + MLT1F1 LTR MaLR 456 565 -2 302 324 110 17 chr2 128779426 128779527 -121908327 - L1ME4a LINE L1 -65 6056 5966 288 0 0 0 chr2 128779527 128779559 -121908295 + (TTG)n Simple_repeat Simple_repeat 2 33 0 302 324 110 17 chr2 128779559 128779630 -121908224 - L1ME4a LINE L1 -155 5966 5868 726 269 60 69 chr2 128779631 128779995 -121907859 + LTR68 LTR ERV1 3 363 -377 1894 169 22 33 chr2 128780114 128780480 -121907374 + MLT1A2 LTR MaLR 1 362 -12 1926 159 3 3 chr2 128780859 128781160 -121906694 + AluJb SINE Alu 1 301 -11 182 200 0 0 chr2 128781188 128781218 -121906636 + MER5B DNA MER1_type 15 44 -134 24 32 0 0 chr2 128781959 128781990 -121905864 + AT_rich Low_complexity Low_complexity 1 31 0 2200 125 0 3 chr2 128782046 128782351 -121905503 - AluSx SINE Alu -8 304 1 3863 236 58 44 chr2 128782544 128783525 -121904329 + Charlie1 DNA MER1_type 1475 2479 -282 2322 108 0 0 chr2 128783525 128783820 -121904034 - AluSx SINE Alu -14 298 4 3863 236 58 44 chr2 128783820 128784100 -121903754 + Charlie1 DNA MER1_type 2479 2754 -7 206 365 0 0 chr2 128784194 128784257 -121903597 - L2 LINE L2 0 3313 3251 1883 157 116 30 chr2 128784310 128784742 -121903112 + MLT2B1 LTR ERVL 2 470 -50 367 258 16 8 chr2 128785417 128785545 -121902309 + Charlie1 DNA MER1_type 2606 2734 -27 244 250 0 0 chr2 128786151 128786211 -121901643 + L3 LINE CR1 1504 1563 -14 2243 148 91 16 chr2 128786765 128786849 -121901005 + MER4E LTR ERV1 1 77 -702 2141 128 0 26 chr2 128786849 128787161 -121900693 + AluSx SINE Alu 1 304 -8 2243 148 91 16 chr2 128787161 128787811 -121900043 + MER4E LTR ERV1 77 779 0 510 303 54 41 chr2 128787922 128788216 -121899638 + L1MC4 LINE L1 7739 8036 -6 346 309 44 7 chr2 128788979 128789115 -121898739 + L2 LINE L2 2565 2705 -609 581 313 58 11 chr2 128790870 128791145 -121896709 - L1MC4 LINE L1 -6 8036 7749 1602 163 10 0 chr2 128791600 128791889 -121895965 - MER46B DNA MER2_type -69 167 1 384 258 11 11 chr2 128791889 128791978 -121895876 - Charlie1 DNA MER1_type -2672 89 1 1117 239 74 23 chr2 128791988 128792582 -121895272 - Zaphod DNA AcHobo -3369 662 2 217 268 49 12 chr2 128792601 128792683 -121895171 - L3 LINE CR1 -1 1576 1492 510 186 17 164 chr2 128792691 128792868 -121894986 + MER69 DNA AcHobo 1 2500 -26 678 218 13 0 chr2 128792972 128793128 -121894726 + Zaphod DNA AcHobo 3819 3976 -55 1349 81 0 17 chr2 128794308 128794481 -121893373 + AluY SINE Alu 1 170 -141 585 151 0 0 chr2 128794581 128794667 -121893187 + AluSg/x SINE Alu 214 299 -11 211 232 0 18 chr2 128795456 128795512 -121892342 + (TCTCTG)n Simple_repeat Simple_repeat 2 56 0 392 273 41 58 chr2 128796567 128796739 -121891115 + MIR SINE MIR 36 204 -58 1351 142 16 0 chr2 128796746 128796936 -121890918 + AluJo SINE Alu 1 193 -119 278 333 0 13 chr2 128797148 128797223 -121890631 - MIR3 SINE MIR -131 77 4 2240 121 0 6 chr2 128797397 128797711 -121890143 + AluSq SINE Alu 1 312 -1 2242 126 0 19 chr2 128797747 128798064 -121889790 + AluSx SINE Alu 1 311 -1 1010 162 6 6 chr2 128798883 128799062 -121888792 + MLT1A1 LTR MaLR 25 203 -162 1512 202 40 6 chr2 128799064 128799391 -121888463 + MLT1A1 LTR MaLR 26 363 -2 222 62 0 0 chr2 128799912 128799944 -121887910 + (GA)n Simple_repeat Simple_repeat 1 32 0 1238 85 33 0 chr2 128801285 128801438 -121886416 - AluSq SINE Alu -152 161 4 559 224 14 0 chr2 128801442 128801585 -121886269 + L1MC4 LINE L1 5603 5747 -2061 2131 119 20 7 chr2 128802207 128802502 -121885352 + AluSx SINE Alu 1 299 -13 2339 103 3 3 chr2 128804170 128804480 -121883374 - AluSq SINE Alu -3 310 1 1946 145 26 3 chr2 128804485 128804788 -121883066 - AluSx SINE Alu -2 310 1 1848 216 71 46 chr2 128804789 128805349 -121882505 + L1MC4a LINE L1 5603 6176 -1632 2404 95 0 0 chr2 128805349 128805653 -121882201 + AluSx SINE Alu 1 304 -8 196 325 97 26 chr2 128805749 128805863 -121881991 - MIR3 SINE MIR -78 130 9 1170 107 0 0 chr2 128805900 128806059 -121881795 + AluSc SINE Alu 143 301 -8 561 229 45 93 chr2 128806059 128806481 -121881373 + L1MC4 LINE L1 6175 6567 -1258 2299 109 0 3 chr2 128806481 128806785 -121881069 + AluSq SINE Alu 1 303 -10 1417 184 4 0 chr2 128806901 128807140 -121880714 - MER7A DNA MER2_type -108 238 1 242 305 0 0 chr2 128807381 128807463 -121880391 + L1M4 LINE L1 3620 3701 -2445 267 31 0 0 chr2 128807478 128807510 -121880344 + (TG)n Simple_repeat Simple_repeat 2 33 0 216 0 0 0 chr2 128808340 128808364 -121879490 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 326 250 40 30 chr2 128808707 128808807 -121879047 - L1ME1 LINE L1 -4 6162 6062 774 217 12 0 chr2 128808808 128808974 -121878880 - L1ME1 LINE L1 -229 5937 5770 2098 138 0 3 chr2 128809858 128810162 -121877692 + AluSx SINE Alu 3 305 -7 1575 172 17 21 chr2 128810977 128811268 -121876586 - AluJb SINE Alu -22 290 1 704 191 20 137 chr2 128811408 128811758 -121876096 - L1MC5 LINE L1 -44 7917 7609 24 0 0 0 chr2 128811807 128811831 -121876023 + AT_rich Low_complexity Low_complexity 1 24 0 260 233 39 39 chr2 128811856 128811959 -121875895 - L1MC5 LINE L1 -385 7576 7474 2226 79 4 0 chr2 128812083 128812363 -121875491 - AluY SINE Alu -30 281 1 214 309 0 0 chr2 128812934 128812989 -121874865 + GA-rich Low_complexity Low_complexity 3 57 0 3957 76 0 8 chr2 128813166 128813691 -121874163 - L1PA8 LINE L1 0 6172 5652 41 0 0 0 chr2 128813924 128813965 -121873889 + AT_rich Low_complexity Low_complexity 1 41 0 182 279 118 0 chr2 128815094 128815162 -121872692 - MIR SINE MIR -37 225 150 202 279 105 35 chr2 128815593 128815679 -121872175 - MIR3 SINE MIR -102 106 15 1617 215 154 27 chr2 128815883 128816013 -121871841 - L1ME1 LINE L1 -13 6153 6041 2243 92 0 3 chr2 128816013 128816305 -121871549 + AluY SINE Alu 1 291 -20 1617 215 154 27 chr2 128816305 128816648 -121871206 - L1ME1 LINE L1 -125 6041 5620 262 143 20 0 chr2 128817102 128817151 -121870703 - MIR SINE MIR -115 147 98 333 230 46 0 chr2 128817216 128817303 -121870551 - MIR SINE MIR -56 152 62 799 204 26 0 chr2 128817585 128817737 -121870117 + MSTD LTR MaLR 1 156 -240 1561 162 33 50 chr2 128817738 128818041 -121869813 + AluJo SINE Alu 1 298 -14 1029 147 18 12 chr2 128818206 128818376 -121869478 + MSTD LTR MaLR 226 396 0 539 300 53 28 chr2 128818875 128819122 -121868732 - MIR SINE MIR 0 262 10 210 317 73 32 chr2 128819221 128819344 -121868510 + MIR3 SINE MIR 9 136 -72 2408 91 0 0 chr2 128819431 128819729 -121868125 - AluSg SINE Alu -12 298 1 264 349 19 0 chr2 128820230 128820336 -121867518 + MIR SINE MIR 49 156 -106 2780 221 24 30 chr2 128820343 128821060 -121866794 + L1M4 LINE L1 3995 4708 -1438 2275 82 3 44 chr2 128821060 128821379 -121866475 + AluY SINE Alu 1 306 -5 2780 221 24 30 chr2 128821379 128821420 -121866434 + L1M4 LINE L1 4708 4748 -1398 486 0 0 0 chr2 128821543 128821597 -121866257 + (GAAA)n Simple_repeat Simple_repeat 2 55 0 227 265 29 0 chr2 128821884 128821952 -121865902 + LTR16C LTR ERVL 422 491 0 1907 119 7 14 chr2 128823245 128823561 -121864293 - AluJo SINE Alu 0 312 17 1250 179 39 0 chr2 128823790 128824047 -121863807 + L1M4 LINE L1 4149 4415 -1731 1522 175 0 67 chr2 128824047 128824182 -121863672 + AluJo SINE Alu 1 143 -169 2044 128 3 7 chr2 128824182 128824472 -121863382 + AluSq SINE Alu 1 289 -24 1522 175 0 67 chr2 128824472 128824650 -121863204 + AluJo SINE Alu 143 293 -19 902 94 0 0 chr2 128824771 128824888 -121862966 + AluSg/x SINE Alu 178 294 -16 2312 98 0 3 chr2 128826040 128826337 -121861517 - AluSq SINE Alu -17 296 1 314 314 47 30 chr2 128826337 128826506 -121861348 + L1MC4a LINE L1 5857 6028 -1780 190 280 7 112 chr2 128826679 128826798 -121861056 + MIR SINE MIR 12 115 -147 2324 94 0 3 chr2 128826798 128827096 -121860758 + AluSg SINE Alu 1 297 -13 190 280 7 112 chr2 128827096 128827119 -121860735 + MIR SINE MIR 115 139 -123 213 121 0 0 chr2 128827825 128827858 -121859996 + (TA)n Simple_repeat Simple_repeat 1 33 0 491 236 0 23 chr2 128827879 128827894 -121859960 + GA-rich Low_complexity Low_complexity 3 17 -155 2288 113 0 3 chr2 128827894 128828195 -121859659 + AluSx SINE Alu 1 300 -12 491 236 0 23 chr2 128828195 128828353 -121859501 + GA-rich Low_complexity Low_complexity 17 172 0 1370 55 0 6 chr2 128828355 128828536 -121859318 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 450 244 43 0 chr2 128830258 128830373 -121857481 + LTR16B LTR ERVL 1 120 -344 275 312 18 18 chr2 128830376 128830485 -121857369 + LTR16B LTR ERVL 68 176 -288 1134 219 97 34 chr2 128830525 128830877 -121856977 + MLT1A2 LTR MaLR 1 374 0 2102 123 0 16 chr2 128831229 128831537 -121856317 + AluSx SINE Alu 1 303 -9 233 289 50 16 chr2 128831546 128831667 -121856187 - LTR16B LTR ERVL -285 179 55 1171 113 0 0 chr2 128831768 128831919 -121855935 - AluSq/x SINE Alu -161 151 1 2156 279 102 43 chr2 128832137 128832285 -121855569 + L1MEd LINE L1 5 143 -2347 1690 186 114 47 chr2 128832285 128832757 -121855097 - MLT1D LTR MaLR 0 505 2 2156 279 102 43 chr2 128832757 128834021 -121853833 + L1MEd LINE L1 143 1608 -882 1228 181 45 86 chr2 128834020 128834440 -121853414 + L1MC5 LINE L1 7327 7729 -232 * 1189 116 66 15 chr2 128834767 128834965 -121852889 + LTR24B LTR ERV1 1 208 -368 1280 178 19 11 chr2 128835102 128835371 -121852483 + L1MB7 LINE L1 4475 4745 -1401 24272 145 33 18 chr2 128835372 128838661 -121849193 + L1PA8A LINE L1 2 3506 -2940 2235 105 0 13 chr2 128838661 128838976 -121848878 - AluY SINE Alu 0 311 1 24272 145 33 18 chr2 128838976 128841935 -121845919 + L1PA8A LINE L1 3506 6417 -29 219 103 0 0 chr2 128841936 128841975 -121845879 + (T)n Simple_repeat Simple_repeat 1 39 0 2498 57 0 3 chr2 128842007 128842306 -121845548 + AluY SINE Alu 1 298 -13 4537 162 62 59 chr2 128842307 128842748 -121845106 + L1MB7 LINE L1 4738 5176 -1008 644 149 116 16 chr2 128842748 128842869 -121844985 + FLAM_C SINE Alu 1 133 0 4537 162 62 59 chr2 128842869 128843856 -121843998 + L1MB7 LINE L1 5176 6177 -7 433 198 172 0 chr2 128844391 128844507 -121843347 + MIR SINE MIR 17 152 -110 1371 106 0 0 chr2 128844650 128844863 -121842991 + AluSg/x SINE Alu 104 316 0 2513 75 0 0 chr2 128845086 128845394 -121842460 + AluY SINE Alu 1 308 -3 323 290 181 16 chr2 128845424 128845617 -121842237 - MIR SINE MIR -10 252 28 310 320 20 64 chr2 128846574 128846777 -121841077 - L2 LINE L2 -156 3116 2923 2045 182 68 25 chr2 128847513 128847953 -121839901 + LTR2B LTR ERV1 32 490 0 2504 90 0 0 chr2 128848065 128848376 -121839478 - AluSp SINE Alu -2 311 1 1841 166 3 3 chr2 128848566 128848861 -121838993 + AluJb SINE Alu 1 295 -17 2671 53 0 0 chr2 128849066 128849369 -121838485 + AluY SINE Alu 1 303 -8 1652 179 33 3 chr2 128849585 128850022 -121837832 + Tigger7 DNA MER2_type 1 483 -198 6064 217 63 66 chr2 128850030 128850224 -121837630 + L1P LINE L1 1655 1848 -4298 1855 176 0 13 chr2 128850224 128850531 -121837323 + AluJb SINE Alu 1 303 -9 2379 104 0 0 chr2 128850533 128850842 -121837012 + AluSq SINE Alu 1 309 -4 6064 217 63 66 chr2 128850842 128851771 -121836083 + L1P LINE L1 1849 2780 -3366 2141 121 3 3 chr2 128851771 128852077 -121835777 + AluSx SINE Alu 1 306 -6 6064 217 63 66 chr2 128852077 128852150 -121835704 + L1P LINE L1 2780 2852 -3294 2464 69 7 7 chr2 128852150 128852453 -121835401 + AluY SINE Alu 1 303 -8 6064 217 63 66 chr2 128852453 128852560 -121835294 + L1P LINE L1 2852 2958 -3188 873 159 0 0 chr2 128852560 128852692 -121835162 + FLAM_C SINE Alu 1 132 -1 6064 217 63 66 chr2 128852692 128853070 -121834784 + L1P LINE L1 2958 3336 -2810 2279 108 0 0 chr2 128853070 128853365 -121834489 + AluSg SINE Alu 1 295 -15 1261 114 0 0 chr2 128853202 128853368 -121834486 + AluSg/x SINE Alu 133 298 -12 * 6064 217 63 66 chr2 128853365 128853642 -121834212 + L1P LINE L1 3336 3547 -2599 2249 114 3 0 chr2 128853642 128853939 -121833915 + AluSx SINE Alu 3 300 -12 6064 217 63 66 chr2 128853939 128854254 -121833600 + L1P LINE L1 3547 3862 -2284 1076 99 26 0 chr2 128854431 128854582 -121833272 + AluSg/x SINE Alu 154 308 -4 33 97 0 0 chr2 128855583 128855686 -121832168 + GC_rich Low_complexity Low_complexity 1 103 0 24 53 0 0 chr2 128855694 128855732 -121832122 + GC_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr2 128857267 128857292 -121830562 + AT_rich Low_complexity Low_complexity 1 25 0 432 235 72 65 chr2 128858035 128858188 -121829666 - MIR3 SINE MIR -9 199 46 278 279 36 45 chr2 128858212 128858323 -121829531 + MIR SINE MIR 23 132 -76 2198 164 100 30 chr2 128858424 128858676 -121829178 + L1MC/D LINE L1 1523 1756 -4670 2269 129 30 24 chr2 128858676 128859049 -121828805 + THE1C LTR MaLR 1 375 0 10184 116 43 37 chr2 128859049 128859941 -121827913 + THE1C-int LTR MaLR 1 909 -671 2252 131 0 0 chr2 128859941 128860239 -121827615 + AluSx SINE Alu 1 298 -14 10184 116 43 37 chr2 128860239 128860916 -121826938 + THE1C-int LTR MaLR 909 1580 0 2339 118 18 32 chr2 128860916 128861296 -121826558 + THE1C LTR MaLR 1 375 0 2198 164 100 30 chr2 128861296 128861636 -121826218 + L1MC/D LINE L1 1756 2258 -4168 1957 134 28 0 chr2 128861636 128861920 -121825934 + AluSx SINE Alu 1 292 -20 2198 164 100 30 chr2 128861920 128861989 -121825865 + L1MC/D LINE L1 2258 2321 -4105 765 167 0 43 chr2 128861989 128862127 -121825727 + AluJ SINE Alu 1 132 -180 247 101 0 63 chr2 128862167 128862246 -121825608 + L1MC/D LINE L1 2316 2389 -4037 2654 113 11 0 chr2 128862246 128862617 -121825237 - THE1C LTR MaLR 0 375 1 4432 121 10 6 chr2 128862618 128863290 -121824564 - THE1C-int LTR MaLR -1 1579 905 1852 138 66 35 chr2 128863291 128863639 -121824215 - MSTC LTR MaLR -69 359 1 795 214 15 5 chr2 128863639 128863845 -121824009 + L1MC/D LINE L1 3063 3270 -3156 206 0 0 65 chr2 128864223 128864254 -121823600 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 685 313 42 20 chr2 128864276 128864679 -121823175 + L1MC/D LINE L1 3827 4238 -2188 809 160 0 0 chr2 128864688 128864813 -121823041 - AluJb SINE Alu -176 136 12 648 157 192 58 chr2 128864813 128864985 -121822869 + AluJ SINE Alu 107 301 -11 2059 130 10 0 chr2 128865003 128865295 -121822559 + AluSx SINE Alu 1 295 -17 1694 190 0 7 chr2 128865328 128865618 -121822236 - AluJo SINE Alu -24 288 1 1126 308 59 45 chr2 128865715 128866905 -121820949 + L1MC/D LINE L1 4317 5522 -904 1693 171 0 11 chr2 128866926 128867235 -121820619 + AluJb SINE Alu 1 306 0 863 175 40 51 chr2 128867267 128867444 -121820410 - FAM SINE Alu 0 175 1 381 102 0 0 chr2 128867502 128867561 -121820293 + (CA)n Simple_repeat Simple_repeat 2 60 0 385 132 40 0 chr2 128867562 128867638 -121820216 + L1MC/D LINE L1 5658 5736 -2352 415 224 0 0 chr2 128867642 128867718 -121820136 - AluJb SINE Alu -9 303 228 826 184 20 7 chr2 128867718 128867870 -121819984 - AluJb SINE Alu -158 154 1 451 302 14 0 chr2 128867878 128868017 -121819837 + L1MC/D LINE L1 5745 5885 -2203 183 205 0 0 chr2 128868145 128868184 -121819670 + CT-rich Low_complexity Low_complexity 2 40 0 2312 95 26 0 chr2 128868355 128868660 -121819194 - AluSq SINE Alu 0 313 1 808 215 90 0 chr2 128868705 128868905 -121818949 - MLT2B2 LTR ERVL -296 219 2 752 257 33 29 chr2 128868907 128869179 -121818675 - L1M4 LINE L1 -3284 2862 2590 562 289 15 57 chr2 128869984 128870140 -121817714 + L1MC4 LINE L1 7789 7931 -111 2330 82 7 0 chr2 128870140 128870432 -121817422 - AluSp SINE Alu -19 294 1 562 289 15 57 chr2 128870432 128870538 -121817316 + L1MC4 LINE L1 7931 8040 -2 23 33 0 0 chr2 128870582 128870612 -121817242 + AT_rich Low_complexity Low_complexity 1 30 0 195 286 0 0 chr2 128871141 128871183 -121816671 + L2 LINE L2 3271 3312 -1 * 327 312 116 21 chr2 128871181 128871370 -121816484 + MIR SINE MIR 42 248 -14 245 366 59 11 chr2 128871877 128872063 -121815791 + L3 LINE CR1 654 848 -729 229 252 225 18 chr2 128872300 128872411 -121815443 + MER77 LTR ERV1 66 199 -406 * 681 246 115 103 chr2 128872392 128872924 -121814930 + MER21B LTR ERV1 133 670 -193 360 301 102 55 chr2 128875050 128875645 -121812209 + L1M4 LINE L1 3338 3960 -2186 1932 53 4 4 chr2 128875679 128875924 -121811930 - L1PA8 LINE L1 0 6172 5928 1402 195 12 4 chr2 128876775 128877032 -121810822 + AluJo SINE Alu 1 259 -53 2102 115 3 14 chr2 128878612 128878943 -121808911 + AluJb SINE Alu 1 328 0 217 0 61 0 chr2 128879035 128879068 -121808786 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 354 269 8 60 chr2 128880118 128880193 -121807661 + L1MC5 LINE L1 7320 7387 -574 1765 173 13 10 chr2 128880193 128880493 -121807361 + AluJb SINE Alu 1 301 -11 354 269 8 60 chr2 128880493 128880551 -121807303 + L1MC5 LINE L1 7387 7446 -515 1966 92 8 0 chr2 128880601 128880852 -121807002 + AluSq SINE Alu 1 253 -60 930 86 39 0 chr2 128880953 128881081 -121806773 + AluSg/x SINE Alu 165 297 -13 2108 113 30 3 chr2 128881086 128881387 -121806467 + AluSx SINE Alu 1 309 -3 337 230 92 33 chr2 128881756 128881904 -121805950 - MIR SINE MIR -67 141 35 376 226 118 10 chr2 128882268 128882370 -121805484 + MIR SINE MIR 38 150 -58 1030 148 7 0 chr2 128882942 128883097 -121804757 - FRAM SINE Alu -10 156 1 2057 117 52 0 chr2 128884958 128885248 -121802606 - AluSx SINE Alu -7 305 1 198 0 0 0 chr2 128885802 128885824 -121802030 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2487 58 7 3 chr2 128886188 128886483 -121801371 - AluY SINE Alu -15 296 1 433 338 64 0 chr2 128888165 128888322 -121799532 - L2 LINE L2 0 3272 3106 2169 116 0 13 chr2 128889036 128889338 -121798516 - AluSx SINE Alu -7 305 8 2267 99 7 0 chr2 128890133 128890427 -121797427 - AluSg1 SINE Alu -13 296 1 371 244 61 0 chr2 128890708 128890823 -121797031 - L1MB7 LINE L1 0 6184 6063 1164 153 0 0 chr2 128890824 128890994 -121796860 - AluSg/x SINE Alu -9 303 134 1714 72 10 0 chr2 128890994 128891202 -121796652 - AluSq SINE Alu -17 296 87 5255 138 22 11 chr2 128891202 128892078 -121795776 - L1MC1 LINE L1 -20 6313 5429 1944 160 20 7 chr2 128892679 128892985 -121794869 + AluJb SINE Alu 1 310 -2 261 279 200 6 chr2 128892990 128893155 -121794699 + MIR SINE MIR 62 258 -4 664 257 68 44 chr2 128893374 128893670 -121794184 + MLT1K LTR MaLR 286 588 0 2002 152 0 0 chr2 128893708 128893997 -121793857 - AluSx SINE Alu -23 289 1 381 208 73 0 chr2 128894122 128894218 -121793636 + MER94 DNA DNA 23 125 -9 2311 122 0 3 chr2 128894605 128894917 -121792937 + AluSx SINE Alu 1 311 -1 2368 186 16 5 chr2 128895779 128896208 -121791646 + Tigger2a DNA MER2_type 1 434 0 770 234 55 38 chr2 128896232 128896257 -121791597 + L1ME3A LINE L1 5127 5150 -1014 2640 33 0 58 chr2 128896257 128896587 -121791267 - AluY SINE Alu 0 311 1 770 234 55 38 chr2 128896587 128896958 -121790896 + L1ME3A LINE L1 5150 5529 -635 275 241 31 99 chr2 128897265 128897427 -121790427 + L2 LINE L2 2962 3112 -160 606 243 93 9 chr2 128897890 128898104 -121789750 - L1ME1 LINE L1 -140 6026 5795 1730 163 13 33 chr2 128898163 128898463 -121789391 + AluJb SINE Alu 5 298 -14 1483 249 171 14 chr2 128898641 128899230 -121788624 - L2 LINE L2 -277 2995 2311 2434 237 84 19 chr2 128899244 128899995 -121787859 + L1ME1 LINE L1 5312 6111 -55 195 250 0 0 chr2 128900674 128900710 -121787144 - L2 LINE L2 -22 3291 3256 335 241 46 0 chr2 128900711 128900798 -121787056 - L2 LINE L2 -1 3312 3222 555 254 95 28 chr2 128900833 128901085 -121786769 + L1ME3A LINE L1 5864 6132 -38 285 70 53 0 chr2 128901354 128901411 -121786443 + (TG)n Simple_repeat Simple_repeat 1 60 0 951 126 0 0 chr2 128902320 128902447 -121785407 + FLAM_C SINE Alu 1 127 -16 26 0 0 0 chr2 128902447 128902473 -121785381 + AT_rich Low_complexity Low_complexity 1 26 0 2187 126 7 0 chr2 128903374 128903667 -121784187 - AluSx SINE Alu -17 295 1 238 333 94 43 chr2 128904587 128904725 -121783129 - MIR SINE MIR -35 227 83 2621 254 203 47 chr2 128904771 128904880 -121782974 - HAL1 LINE L1 -61 2446 2355 2029 148 7 3 chr2 128904880 128905190 -121782664 - AluJb SINE Alu -1 311 1 2621 254 203 47 chr2 128905190 128905441 -121782413 - HAL1 LINE L1 -152 2355 2144 2367 88 0 3 chr2 128905441 128905737 -121782117 - AluSc SINE Alu -14 295 1 2621 254 203 47 chr2 128905737 128907407 -121780447 - HAL1 LINE L1 -363 2144 99 913 134 0 8 chr2 128907817 128907944 -121779910 + FLAM_C SINE Alu 1 126 -7 2427 99 0 3 chr2 128908802 128909115 -121778739 - AluSx SINE Alu 0 312 1 2460 91 3 0 chr2 128909370 128909678 -121778176 - AluSp SINE Alu -3 310 2 2433 82 0 19 chr2 128910824 128911139 -121776715 + AluSq SINE Alu 3 311 -2 3746 209 45 3 chr2 128911455 128912321 -121775533 + L1 LINE L1 4156 5057 -1089 3880 169 28 36 chr2 128912325 128912563 -121775291 - L1MB8 LINE L1 -81 6097 5859 2163 122 0 7 chr2 128912563 128912866 -121774988 - AluSx SINE Alu -10 302 2 3880 169 28 36 chr2 128912866 128913593 -121774261 - L1MB8 LINE L1 -319 5859 5139 912 212 135 9 chr2 128916593 128916815 -121771039 + MIR SINE MIR 3 252 -10 546 67 0 101 chr2 128918211 128918250 -121769604 + MADE1 DNA Mariner 1 28 -52 2292 78 20 3 chr2 128918250 128918543 -121769311 - AluSq SINE Alu -15 298 1 546 67 0 101 chr2 128918543 128918592 -121769262 + MADE1 DNA Mariner 28 80 0 1249 191 87 29 chr2 128918978 128919450 -121768404 + MER92B LTR ERV1 1 555 -81 399 306 126 26 chr2 128969457 128969728 -121718126 + L1MCc LINE L1 296 593 -5830 195 42 0 0 chr2 128969767 128969791 -121718063 + (A)n Simple_repeat Simple_repeat 1 24 0 1892 228 141 42 chr2 128969868 128970061 -121717793 + L1MCc LINE L1 835 1008 -6114 2117 75 6 99 chr2 128970061 128970394 -121717460 + AluSq SINE Alu 1 302 -11 1892 228 141 42 chr2 128970394 128971370 -121716484 + L1MCc LINE L1 1008 2380 -4742 1737 175 29 4 chr2 128971370 128971650 -121716204 + AluJb SINE Alu 1 287 -25 1892 228 141 42 chr2 128971650 128971970 -121715884 + L1MCc LINE L1 2380 2667 -4455 231 255 0 0 chr2 128971992 128972043 -121715811 - L1ME LINE L1 -406 5715 5665 730 126 0 39 chr2 128973212 128973339 -121714515 + AluSg/x SINE Alu 189 310 0 1586 158 30 47 chr2 128973351 128973649 -121714205 + AluJo SINE Alu 1 293 -19 22 35 0 0 chr2 128973969 128973998 -121713856 + AT_rich Low_complexity Low_complexity 1 29 0 271 200 57 114 chr2 128974394 128974499 -121713355 + MIR SINE MIR 5 103 -159 191 323 48 0 chr2 128975141 128975203 -121712651 - MIR3 SINE MIR -51 157 93 1129 246 7 36 chr2 128975347 128975652 -121712202 + AluJb SINE Alu 2 297 -5 497 153 51 8 chr2 128975827 128975945 -121711909 - L1MB8 LINE L1 -10 6168 6046 21 0 0 0 chr2 128976602 128976623 -121711231 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 128977860 128977888 -121709966 + AT_rich Low_complexity Low_complexity 1 28 0 2192 126 0 0 chr2 128977944 128978245 -121709609 + AluSx SINE Alu 1 301 -11 21 71 0 0 chr2 128979248 128979290 -121708564 + AT_rich Low_complexity Low_complexity 1 42 0 2417 76 0 0 chr2 128979318 128979606 -121708248 - AluSc SINE Alu -21 288 1 352 271 0 0 chr2 128980234 128980367 -121707487 + G-rich Low_complexity Low_complexity 1 133 0 4063 169 93 38 chr2 128980487 128981140 -121706714 + L1MC2 LINE L1 5168 5903 -441 1844 131 85 0 chr2 128981140 128981422 -121706432 + AluSx SINE Alu 1 306 -6 4063 169 93 38 chr2 128981422 128981869 -121705985 + L1MC2 LINE L1 5903 6324 -20 2048 160 23 69 chr2 128981932 128982063 -121705791 + L1ME1 LINE L1 5487 5623 -541 2634 123 52 0 chr2 128982063 128982470 -121705384 + MSTA LTR MaLR 1 428 0 2048 160 23 69 chr2 128982470 128982857 -121704997 + L1ME1 LINE L1 5623 5981 -183 415 267 18 99 chr2 128982869 128983090 -121704764 + L1ME1 LINE L1 5955 6157 -9 2328 92 0 0 chr2 128983521 128983824 -121704030 + AluY SINE Alu 1 303 -8 190 311 169 20 chr2 128984281 128984429 -121703425 + MIR SINE MIR 32 201 -61 839 228 55 51 chr2 128984651 128984888 -121702966 + MIR SINE MIR 20 257 -5 351 259 96 22 chr2 128985194 128985329 -121702525 + MIR SINE MIR 105 249 -13 1242 190 123 35 chr2 128985393 128985709 -121702145 - MER2 DNA MER2_type 0 344 1 1351 151 5 0 chr2 128986239 128986444 -121701410 - AluJo SINE Alu -106 206 1 2272 103 36 0 chr2 128987333 128987634 -121700220 + AluSx SINE Alu 1 312 0 1866 68 4 19 chr2 128988092 128988356 -121699498 - Tigger1 DNA MER2_type -692 1726 1467 486 112 101 95 chr2 128988368 128988451 -121699403 - Tigger1 DNA MER2_type -82 2336 2255 198 0 0 0 chr2 128988451 128988473 -121699381 + (TA)n Simple_repeat Simple_repeat 2 23 0 486 112 101 95 chr2 128988473 128988492 -121699362 - Tigger1 DNA MER2_type -163 2255 2238 2262 56 3 69 chr2 128988492 128988811 -121699043 + AluY SINE Alu 1 298 -13 486 112 101 95 chr2 128988811 128988876 -121698978 - Tigger1 DNA MER2_type -180 2238 2167 595 252 8 0 chr2 128988878 128989009 -121698845 - FLAM_C SINE Alu 0 133 2 1420 194 60 30 chr2 128989031 128989412 -121698442 + L1 LINE L1 4169 4566 -1580 2341 152 76 0 chr2 128989412 128989808 -121698046 + MSTB LTR MaLR 1 426 0 1420 194 60 30 chr2 128989808 128989860 -121697994 + L1 LINE L1 4566 4615 -1531 1789 144 26 0 chr2 128989862 128990126 -121697728 + AluSx SINE Alu 2 272 -40 278 130 43 58 chr2 128990126 128990195 -121697659 - Tigger1 DNA MER2_type -2349 69 2 302 239 23 0 chr2 128990196 128990284 -121697570 + L1M4c LINE L1 1587 1676 -4708 368 310 41 56 chr2 128990338 128990751 -121697103 - L1MC4 LINE L1 -131 7911 7505 362 330 89 7 chr2 128990841 128991111 -121696743 - L1MC4 LINE L1 -548 7494 7203 571 203 55 16 chr2 128991528 128991656 -121696198 + FLAM_A SINE Alu 1 133 0 212 274 164 0 chr2 128992467 128992540 -121695314 + L2 LINE L2 3157 3241 -31 953 249 18 18 chr2 128992696 128992925 -121694929 - MIR SINE MIR -26 236 8 465 221 129 36 chr2 128993253 128993393 -121694461 + MIR SINE MIR 109 261 -1 26 30 0 0 chr2 128993474 128993507 -121694347 + AT_rich Low_complexity Low_complexity 1 33 0 1391 147 0 158 chr2 128993565 128993932 -121693922 + AluJb SINE Alu 1 309 -3 502 204 19 0 chr2 128994677 128994785 -121693069 - AluSg/x SINE Alu -4 308 199 1828 171 17 0 chr2 128995610 128995902 -121691952 - AluJb SINE Alu -14 298 2 578 146 18 105 chr2 128995952 128996117 -121691737 - MLT1I LTR MaLR -35 374 225 1522 163 64 66 chr2 128996117 128996509 -121691345 - LTR22 LTR ERVK 0 509 119 294 265 0 10 chr2 128996668 128996770 -121691084 + MSTA LTR MaLR 328 428 0 2345 196 121 99 chr2 128996791 128997144 -121690710 - L1MC3 LINE L1 -115 7670 7326 1837 149 88 35 chr2 128997144 128997520 -121690334 - MSTD LTR MaLR 0 396 1 2345 196 121 99 chr2 128997520 128997629 -121690225 - L1MC3 LINE L1 -459 7326 7221 303 243 0 0 chr2 128997629 128997703 -121690151 - MLT1I LTR MaLR -442 125 52 2345 196 121 99 chr2 128997703 128998114 -121689740 - L1MC3 LINE L1 -564 7221 6702 2394 94 0 3 chr2 128998149 128998446 -121689408 + AluSp SINE Alu 1 296 -17 629 210 64 11 chr2 128998490 128998674 -121689180 + MLT1J LTR MaLR 1 161 -289 1252 151 0 0 chr2 128999709 128999894 -121687960 - AluSg/x SINE Alu -2 310 126 2263 94 7 3 chr2 128999897 129000196 -121687658 - AluSg SINE Alu -10 300 1 4585 117 23 16 chr2 129000197 129000461 -121687393 + L1MA4A LINE L1 5515 5775 -528 2382 56 7 7 chr2 129000461 129000765 -121687089 + AluY SINE Alu 1 304 -7 4585 117 23 16 chr2 129000765 129001268 -121686586 + L1MA4A LINE L1 5775 6288 -15 999 197 205 8 chr2 129001271 129001510 -121686344 + AluSg1 SINE Alu 3 288 -21 27 29 0 0 chr2 129001511 129001545 -121686309 + AT_rich Low_complexity Low_complexity 1 34 0 2506 86 0 6 chr2 129003013 129003326 -121684528 - AluSx SINE Alu -1 311 1 1260 230 150 0 chr2 129003529 129003916 -121683938 + L1MC4 LINE L1 6719 7163 -879 465 218 90 0 chr2 129003923 129004056 -121683798 + L1MC4 LINE L1 7218 7362 -680 420 215 140 9 chr2 129004291 129004398 -121683456 + MIR SINE MIR 34 154 -108 919 198 137 21 chr2 129004403 129004825 -121683029 + L1ME1 LINE L1 5615 6132 -34 205 273 26 13 chr2 129004841 129004918 -121682936 + MIR SINE MIR 148 225 -37 423 232 128 8 chr2 129005285 129005410 -121682444 - LTR22 LTR ERVK -369 140 1 39303 87 16 3 chr2 129005410 129005801 -121682053 - HERVK22 LTR ERVK 0 6837 6453 2001 117 0 0 chr2 129005801 129006058 -121681796 + AluSc SINE Alu 26 308 0 202 39 0 0 chr2 129006058 129006084 -121681770 + (TAAA)n Simple_repeat Simple_repeat 2 100 0 39303 87 16 3 chr2 129006084 129011111 -121676743 - HERVK22 LTR ERVK -384 6453 1 2194 179 85 62 chr2 129011113 129011609 -121676245 - LTR22 LTR ERVK -2 507 1 518 308 47 28 chr2 129011610 129011824 -121676030 - MLT1I LTR MaLR -178 231 14 2036 126 20 0 chr2 129013379 129013673 -121674181 - AluSx SINE Alu -12 300 1 1878 166 0 7 chr2 129014615 129014917 -121672937 + AluJb SINE Alu 1 300 -12 252 0 0 0 chr2 129015045 129015073 -121672781 + (CA)n Simple_repeat Simple_repeat 2 29 0 264 238 202 0 chr2 129015381 129015465 -121672389 - L3 LINE CR1 -7 1570 1470 409 355 96 27 chr2 129015545 129015584 -121672270 + L3 LINE CR1 185 220 -1357 1981 151 0 3 chr2 129015584 129015889 -121671965 + AluSx SINE Alu 1 304 -8 409 355 96 27 chr2 129015889 129016142 -121671712 + L3 LINE CR1 220 497 -1080 1567 154 33 59 chr2 129016207 129016513 -121671341 - AluJo SINE Alu -14 298 1 2120 117 10 0 chr2 129016542 129016833 -121671021 - AluSc SINE Alu -15 294 1 250 234 31 16 chr2 129017074 129017138 -121670716 - MIR3 SINE MIR -11 197 133 246 310 20 10 chr2 129018027 129018127 -121669727 + L1MC/D LINE L1 5741 5841 -1967 370 257 128 0 chr2 129018306 129018415 -121669439 + L2 LINE L2 3190 3312 -1 2250 92 3 3 chr2 129018624 129018918 -121668936 + AluSx SINE Alu 1 294 -18 315 283 91 0 chr2 129019684 129019783 -121668071 + MER117 DNA MER1_type 28 135 -62 3095 116 33 2 chr2 129020100 129020550 -121667304 - L1PA13 LINE L1 -4 6159 5696 21 0 0 0 chr2 129021915 129021936 -121665918 + AT_rich Low_complexity Low_complexity 1 21 0 2089 142 0 0 chr2 129022141 129022443 -121665411 + AluSg SINE Alu 1 302 -8 787 87 0 10 chr2 129022484 129022588 -121665266 - FLAM_C SINE Alu -6 137 35 2258 78 0 0 chr2 129022772 129023053 -121664801 - AluY SINE Alu -30 281 1 2609 64 0 0 chr2 129023285 129023596 -121664258 - AluY SINE Alu 0 311 1 306 0 0 0 chr2 129024153 129024187 -121663667 + (TG)n Simple_repeat Simple_repeat 2 35 0 1234 142 125 13 chr2 129025098 129025330 -121662524 - MER68 LTR ERV1 -297 265 8 442 245 59 69 chr2 129025389 129025501 -121662353 + L1M4c LINE L1 2003 2114 -4270 1701 134 53 11 chr2 129025501 129025785 -121662069 + AluJb SINE Alu 1 296 -16 442 245 59 69 chr2 129025785 129025876 -121661978 + L1M4c LINE L1 2114 2204 -4180 259 170 0 43 chr2 129025888 129025935 -121661919 + Tigger4(Zombi) DNA MER2_type 63 107 -2624 569 194 37 9 chr2 129026039 129026147 -121661707 - FLAM_C SINE Alu -30 113 3 3269 123 32 83 chr2 129026149 129026777 -121661077 + Tigger1 DNA MER2_type 1823 2418 0 279 205 80 27 chr2 129026791 129026903 -121660951 + L1MC4 LINE L1 7925 8042 0 455 221 139 6 chr2 129028095 129028253 -121659601 + MIR SINE MIR 74 252 -10 21 71 0 0 chr2 129028553 129028595 -121659259 + GC_rich Low_complexity Low_complexity 1 42 0 315 177 0 0 chr2 129028595 129028657 -121659197 + (CA)n Simple_repeat Simple_repeat 2 63 0 22 70 0 0 chr2 129028702 129028745 -121659109 + GC_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr2 129028853 129028881 -121658973 + GC_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 129029251 129029274 -121658580 + GC_rich Low_complexity Low_complexity 1 23 0 196 29 0 57 chr2 129029369 129029404 -121658450 + (CCCCG)n Simple_repeat Simple_repeat 3 35 0 215 250 0 19 chr2 129029801 129029853 -121658001 - MIR SINE MIR -58 150 100 200 164 0 148 chr2 129030547 129030608 -121657246 + L2 LINE L2 3219 3270 -2 308 305 92 92 chr2 129030876 129031115 -121656739 - L2 LINE L2 -6 3266 3028 1601 188 56 22 chr2 129031120 129031466 -121656388 - MLT1E3 LTR MaLR 0 616 267 200 164 0 148 chr2 129031502 129031563 -121656291 + L2 LINE L2 3219 3270 -2 2121 107 13 3 chr2 129031905 129032204 -121655650 - AluSg SINE Alu -8 302 1 463 244 143 12 chr2 129032204 129032390 -121655464 - MLT1E1 LTR MaLR -422 202 1 343 291 77 0 chr2 129032715 129032832 -121655022 - MLT1L LTR MaLR -2 613 488 3317 125 46 7 chr2 129032971 129033561 -121654293 - MER4B LTR ERV1 0 779 1 5836 238 70 16 chr2 129033742 129034891 -121652963 + L1MB7 LINE L1 2670 3967 -2179 2183 122 0 10 chr2 129034891 129035203 -121652651 + AluSx SINE Alu 4 312 0 5836 238 70 16 chr2 129035203 129035991 -121651863 + L1MB7 LINE L1 3967 4711 -1435 2271 211 177 19 chr2 129035984 129036281 -121651573 + L1MB7 LINE L1 5387 5636 -548 * 1841 163 0 24 chr2 129036281 129036597 -121651257 + AluSx SINE Alu 1 309 0 2271 211 177 19 chr2 129036597 129036943 -121650911 + L1MB7 LINE L1 5636 6169 -15 705 232 96 9 chr2 129036957 129037177 -121650677 - MER102b DNA MER1_type -33 308 70 1564 155 21 34 chr2 129037336 129037627 -121650227 - AluJb SINE Alu -5 307 21 203 336 212 0 chr2 129037762 129037875 -121649979 - MIR3 SINE MIR -41 167 31 862 182 144 0 chr2 129038058 129038239 -121649615 - AluJb SINE Alu -14 298 92 824 190 82 60 chr2 129038239 129038508 -121649346 + L1MC4 LINE L1 6781 7055 -987 642 205 0 8 chr2 129038523 129038645 -121649209 + FLAM_A SINE Alu 22 142 0 2666 204 37 94 chr2 129038654 129039566 -121648288 + L1MC4 LINE L1 7040 7899 -143 666 274 178 7 chr2 129039643 129039924 -121647930 + L2 LINE L2 2376 2704 -610 2055 152 0 0 chr2 129040078 129040387 -121647467 - AluJo SINE Alu -3 309 1 208 374 115 40 chr2 129040561 129040839 -121647015 + L2 LINE L2 2017 2315 -999 10967 29 3 129 chr2 129040887 129042470 -121645384 + SVA Other Other 4 1386 0 1881 267 143 11 chr2 129042691 129043421 -121644433 + L1MEc LINE L1 549 1374 -5022 5929 104 27 52 chr2 129043572 129044550 -121643304 - Tigger1 DNA MER2_type -1 2417 1465 829 109 27 14 chr2 129044555 129044702 -121643152 - Tigger1 DNA MER2_type -82 2336 2188 695 190 17 0 chr2 129044730 129044846 -121643008 - FLAM_C SINE Alu -8 135 18 2282 205 62 11 chr2 129044850 129045500 -121642354 + L1 LINE L1 4419 5390 -756 1138 154 10 15 chr2 129045500 129045695 -121642159 + AluJo SINE Alu 86 279 -33 1070 232 126 3 chr2 129045726 129046036 -121641818 + L1M4 LINE L1 4655 5002 -1144 4531 200 34 49 chr2 129046141 129046774 -121641080 + L1MC2 LINE L1 3808 4449 -1895 2285 114 3 0 chr2 129046774 129047080 -121640774 + AluSp SINE Alu 1 307 -6 4531 200 34 49 chr2 129047080 129047345 -121640509 + L1MC2 LINE L1 4449 4716 -1628 1983 139 3 17 chr2 129047345 129047647 -121640207 - AluSx SINE Alu -13 299 2 4531 200 34 49 chr2 129047647 129047960 -121639894 + L1MC2 LINE L1 4716 5032 -1312 1883 150 24 0 chr2 129047960 129048254 -121639600 + AluJo SINE Alu 2 302 -10 4531 200 34 49 chr2 129048254 129048898 -121638956 + L1MC2 LINE L1 5032 5607 -737 803 173 31 0 chr2 129048899 129049026 -121638828 + FLAM_C SINE Alu 2 132 -11 4251 141 31 34 chr2 129049027 129049400 -121638454 + L1MC2 LINE L1 5597 5970 -374 2172 101 11 0 chr2 129049400 129049687 -121638167 + AluSg1 SINE Alu 1 290 -19 4251 141 31 34 chr2 129049687 129049997 -121637857 + L1MC2 LINE L1 5970 6280 -64 2233 101 3 10 chr2 129049997 129050305 -121637549 - AluSg SINE Alu -4 306 1 4251 141 31 34 chr2 129050305 129050360 -121637494 + L1MC2 LINE L1 6280 6334 -10 2300 102 0 10 chr2 129050367 129050670 -121637184 - AluSx SINE Alu -12 300 1 374 289 97 23 chr2 129051095 129051532 -121636322 + L1MCc LINE L1 1237 1865 -4887 283 255 21 21 chr2 129051713 129051807 -121636047 + MIR3 SINE MIR 2 95 -113 1977 148 3 0 chr2 129052293 129052590 -121635264 + AluSx SINE Alu 1 298 -14 219 250 0 0 chr2 129052598 129052650 -121635204 + MIR SINE MIR 180 231 -31 822 204 56 5 chr2 129054447 129054643 -121633211 + L1PB4 LINE L1 5950 6155 -1 1943 130 0 14 chr2 129054665 129054949 -121632905 + AluSx SINE Alu 1 280 -32 219 69 0 0 chr2 129054949 129054978 -121632876 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 255 279 0 0 chr2 129055356 129055442 -121632412 - L1 LINE L1 -2701 3445 3360 319 276 51 66 chr2 129055449 129055645 -121632209 - L1 LINE L1 -2902 3244 3052 183 42 0 0 chr2 129055663 129055687 -121632167 + (TATG)n Simple_repeat Simple_repeat 2 25 0 1749 156 7 0 chr2 129055694 129055963 -121631891 - AluJb SINE Alu -28 284 14 1749 181 19 59 chr2 129056013 129056384 -121631470 - MLT1C LTR MaLR 0 467 112 214 65 0 0 chr2 129056384 129056415 -121631439 + (TTTA)n Simple_repeat Simple_repeat 2 108 0 1234 112 0 0 chr2 129056415 129056576 -121631278 - AluSg/x SINE Alu -28 282 122 706 207 0 0 chr2 129056576 129056697 -121631157 - MLT1C LTR MaLR -345 122 2 2112 189 48 18 chr2 129056702 129057101 -121630753 + MLT2D LTR ERVL 2 412 -2 2228 134 0 0 chr2 129057139 129057438 -121630416 - AluSq SINE Alu -14 299 1 395 279 62 0 chr2 129057551 129057730 -121630124 - L1 LINE L1 -3272 2874 2685 2048 134 7 0 chr2 129057735 129058025 -121629829 + AluSx SINE Alu 1 292 -20 286 286 79 31 chr2 129058121 129058513 -121629341 - L1 LINE L1 -3600 2546 2136 1247 290 38 13 chr2 129058559 129058591 -121629263 - L1M4 LINE L1 -1111 5846 5816 2336 111 0 3 chr2 129058591 129058898 -121628956 - AluSx SINE Alu -6 306 1 1247 290 38 13 chr2 129058898 129059337 -121628517 - L1M4 LINE L1 -1141 5816 5363 319 244 107 15 chr2 129059575 129059706 -121628148 - L1M4 LINE L1 -6707 152 10 198 270 0 32 chr2 129060021 129060084 -121627770 + L2 LINE L2 1468 1528 -1786 826 172 0 21 chr2 129060191 129060336 -121627518 - FLAM_C SINE Alu -1 142 1 481 221 22 73 chr2 129060341 129060477 -121627377 + MER5B DNA MER1_type 1 129 -49 2407 91 0 3 chr2 129060497 129060806 -121627048 - AluSc SINE Alu -1 308 1 2185 128 0 0 chr2 129060809 129061107 -121626747 - AluSx SINE Alu -14 298 1 476 208 31 0 chr2 129061108 129061204 -121626650 - MER2 DNA MER2_type -246 99 1 2164 120 0 0 chr2 129061345 129061636 -121626218 - AluSx SINE Alu -21 291 1 1479 101 0 0 chr2 129062092 129062280 -121625574 + AluSc SINE Alu 115 302 -7 834 181 0 0 chr2 129062747 129062880 -121624974 - FLAM_A SINE Alu 0 133 1 1507 264 34 3 chr2 129063222 129063609 -121624245 - MLT2E LTR ERVL -10 618 220 294 190 100 60 chr2 129063653 129063753 -121624101 - MLT2E LTR ERVL -559 104 1 510 188 137 0 chr2 129063848 129063965 -121623889 + MIR SINE MIR 93 225 -37 288 286 64 48 chr2 129064343 129064482 -121623372 + MIR SINE MIR 5 145 -63 341 271 30 38 chr2 129064556 129064689 -121623165 - MIR SINE MIR -120 142 11 276 238 150 0 chr2 129065373 129065453 -121622401 - MIR SINE MIR -87 175 84 246 245 37 0 chr2 129065863 129065930 -121621924 + MIR SINE MIR 79 147 -61 345 288 59 47 chr2 129065934 129066104 -121621750 - MER112 DNA MER1_type -84 176 5 3656 186 76 26 chr2 129066654 129067546 -121620308 + L1MC4a LINE L1 6681 7617 -191 386 197 45 184 chr2 129067892 129068202 -121619652 - MLT1L LTR MaLR -347 268 2 1825 153 61 0 chr2 129068975 129069269 -121618585 + AluJb SINE Alu 1 312 0 700 127 21 49 chr2 129069269 129069447 -121618407 + L1PA14 LINE L1 6024 6197 0 566 180 180 0 chr2 129069478 129069589 -121618265 + FLAM_C SINE Alu 1 131 -2 24 0 0 0 chr2 129069591 129069615 -121618239 + AT_rich Low_complexity Low_complexity 1 24 0 1848 128 0 11 chr2 129069979 129070244 -121617610 + AluJb SINE Alu 28 289 -23 325 247 24 94 chr2 129070358 129070528 -121617326 - MER112 DNA MER1_type -8 252 95 315 225 0 63 chr2 129070752 129070863 -121616991 + C-rich Low_complexity Low_complexity 2 105 0 192 183 0 49 chr2 129070876 129070958 -121616896 + C-rich Low_complexity Low_complexity 4 81 0 208 233 8 58 chr2 129071030 129071150 -121616704 + (CGGG)n Simple_repeat Simple_repeat 4 117 0 197 332 35 52 chr2 129071543 129071775 -121616079 + L2 LINE L2 2964 3191 -81 1850 133 0 29 chr2 129071928 129072237 -121615617 + AluJb SINE Alu 1 300 -12 2173 107 7 3 chr2 129072572 129072862 -121614992 + AluSx SINE Alu 1 291 -21 2262 105 3 0 chr2 129073275 129073571 -121614283 - AluSx SINE Alu -15 297 1 207 179 0 0 chr2 129073617 129073656 -121614198 + CT-rich Low_complexity Low_complexity 1 39 0 4040 195 55 33 chr2 129075561 129077154 -121610700 + L1ME1 LINE L1 4307 5928 -238 2046 115 36 0 chr2 129077154 129077433 -121610421 + AluSx SINE Alu 1 289 -23 4040 195 55 33 chr2 129077433 129077672 -121610182 + L1ME1 LINE L1 5928 6160 -6 1682 145 32 21 chr2 129078182 129078465 -121609389 + AluJo SINE Alu 1 286 -26 25 0 0 0 chr2 129078466 129078491 -121609363 + AT_rich Low_complexity Low_complexity 1 25 0 283 304 76 0 chr2 129078500 129078579 -121609275 - MIR SINE MIR -76 186 102 251 333 0 30 chr2 129079750 129079849 -121608005 + L2 LINE L2 2994 3089 -183 241 303 119 9 chr2 129080639 129080748 -121607106 + MIR SINE MIR 34 154 -54 331 194 102 31 chr2 129080903 129081001 -121606853 + HsTC2 DNA Tc2 1794 1898 0 356 321 45 8 chr2 129081005 129081139 -121606715 + MIR SINE MIR 74 212 -50 406 281 9 26 chr2 129082077 129082191 -121605663 + MIR SINE MIR 87 198 -64 * 947 262 16 24 chr2 129082188 129082436 -121605418 - MIR SINE MIR -1 261 16 216 267 199 38 chr2 129083362 129083493 -121604361 + L2 LINE L2 2899 3050 -222 321 267 8 12 chr2 129083779 129083902 -121603952 - MIR3 SINE MIR -18 244 82 274 157 58 141 chr2 129085270 129085391 -121602463 + MER5A DNA MER1_type 3 113 -76 23 33 0 0 chr2 129086066 129086096 -121601758 + GC_rich Low_complexity Low_complexity 1 30 0 582 228 107 55 chr2 129086817 129087064 -121600790 - HAL1 LINE L1 -1098 1409 1143 2470 82 3 3 chr2 129087064 129087369 -121600485 - AluSp SINE Alu -8 305 1 582 228 107 55 chr2 129087369 129087411 -121600443 - HAL1 LINE L1 -1364 1143 1105 823 167 0 36 chr2 129087427 129087565 -121600289 + FLAM_C SINE Alu 1 133 0 230 128 21 0 chr2 129087579 129087626 -121600228 - L1MD3 LINE L1 -10 7985 7938 237 271 120 47 chr2 129087636 129087935 -121599919 - HAL1 LINE L1 -1730 777 457 318 232 64 16 chr2 129088068 129088193 -121599661 - HAL1 LINE L1 -2263 244 114 198 0 0 0 chr2 129088591 129088613 -121599241 + (ACTG)n Simple_repeat Simple_repeat 1 22 0 189 291 51 38 chr2 129088641 129088720 -121599134 - MIR SINE MIR -112 150 71 249 33 0 0 chr2 129088763 129088793 -121599061 + (ACTG)n Simple_repeat Simple_repeat 1 30 0 197 172 0 0 chr2 129091938 129091967 -121595887 - L2 LINE L2 -16 3256 3228 455 232 18 83 chr2 129092018 129092186 -121595668 - MER69A DNA AcHobo -1 176 20 312 204 292 33 chr2 129092200 129092331 -121595523 - MIR SINE MIR -63 145 8 248 272 74 12 chr2 129092650 129092696 -121595158 + MIR3 SINE MIR 74 116 -92 3006 155 34 36 chr2 129092696 129093251 -121594603 + MLT2B3 LTR ERVL 1 554 0 248 272 74 12 chr2 129093251 129093285 -121594569 + MIR3 SINE MIR 116 159 -49 217 200 0 0 chr2 129093286 129093331 -121594523 - MER5B DNA MER1_type 0 178 134 1298 135 0 0 chr2 129093332 129093517 -121594337 - AluSg/x SINE Alu 0 310 126 1720 85 22 0 chr2 129093532 129093755 -121594099 - AluY SINE Alu -1 310 83 4849 193 94 24 chr2 129093756 129094872 -121592982 - L1MCa LINE L1 -2828 3736 2700 212 0 36 0 chr2 129094872 129094900 -121592954 + (TG)n Simple_repeat Simple_repeat 2 30 0 4849 193 94 24 chr2 129094900 129096065 -121591789 - L1MCa LINE L1 -3864 2700 1128 970 87 31 0 chr2 129096065 129096192 -121591662 - FLAM_C SINE Alu -2 131 1 4849 193 94 24 chr2 129096192 129096425 -121591429 - L1MCa LINE L1 -5436 1128 913 285 91 23 0 chr2 129096569 129096613 -121591241 - L1MCa LINE L1 -4762 1802 1758 * 2176 239 96 33 chr2 129096609 129097430 -121590424 - L1MCa LINE L1 -5172 873 1 2568 226 77 53 chr2 129097441 129098438 -121589416 - L1M4 LINE L1 -960 5186 4166 792 238 109 4 chr2 129098435 129098691 -121589163 - L1M4 LINE L1 -2578 3568 3286 * 2278 97 0 0 chr2 129098692 129098980 -121588874 - AluSc SINE Alu -21 288 1 1162 38 8 0 chr2 129098980 129099112 -121588742 - AluSc SINE Alu -176 133 1 1551 249 58 33 chr2 129099156 129099675 -121588179 + LTR55 LTR ERV 1 532 -16 2250 110 0 0 chr2 129099679 129099969 -121587885 - AluSx SINE Alu -22 290 1 2240 114 3 0 chr2 129101952 129102250 -121585604 + AluSq SINE Alu 1 299 -14 343 216 113 21 chr2 129102681 129102778 -121585076 - L1MC4 LINE L1 -1747 6295 6190 1101 167 76 14 chr2 129102801 129103011 -121584843 - AluJo SINE Alu -89 223 1 455 275 80 14 chr2 129103397 129103535 -121584319 - L2 LINE L2 -4 3268 3122 2357 97 3 7 chr2 129103997 129104307 -121583547 - AluSc SINE Alu 0 309 1 1063 88 225 0 chr2 129104607 129104789 -121583065 - MER30 DNA MER1_type 0 230 8 3962 226 69 51 chr2 129104823 129105431 -121582423 + L1MB7 LINE L1 2382 2978 -3168 825 165 8 15 chr2 129105431 129105564 -121582290 + FLAM_A SINE Alu 1 132 -1 3962 226 69 51 chr2 129105564 129105854 -121582000 + L1MB7 LINE L1 2978 3261 -2885 1287 136 54 163 chr2 129105854 129106186 -121581668 + AluJo SINE Alu 1 296 -6 3962 226 69 51 chr2 129106186 129106199 -121581655 + L1MB7 LINE L1 3261 3272 -2874 1593 164 4 15 chr2 129106199 129106473 -121581381 + AluJo SINE Alu 41 311 -1 3962 226 69 51 chr2 129106473 129106859 -121580995 + L1MB7 LINE L1 3272 3650 -2496 2313 91 3 3 chr2 129106859 129107155 -121580699 - AluSc SINE Alu -13 296 1 3962 226 69 51 chr2 129107155 129107666 -121580188 + L1MB7 LINE L1 3650 4150 -1996 2220 116 0 0 chr2 129107666 129107958 -121579896 + AluSx SINE Alu 1 292 -20 3962 226 69 51 chr2 129107958 129108240 -121579614 + L1MB7 LINE L1 4150 4425 -1721 961 152 26 0 chr2 129108240 129108391 -121579463 + FRAM SINE Alu 1 155 -11 3962 226 69 51 chr2 129108391 129108721 -121579133 + L1MB7 LINE L1 4425 4862 -1284 854 156 44 63 chr2 129108714 129108772 -121579082 - L1MC2 LINE L1 0 6344 6286 * 1967 142 0 23 chr2 129108772 129109082 -121578772 + AluJo SINE Alu 1 303 -9 854 156 44 63 chr2 129109082 129109228 -121578626 - L1MC2 LINE L1 -58 6286 6144 * 3655 169 73 31 chr2 129109225 129110496 -121577358 + L1MB7 LINE L1 4848 6183 -1 222 263 132 13 chr2 129110985 129111061 -121576793 + MIR SINE MIR 13 97 -165 2135 124 7 0 chr2 129111462 129111760 -121576094 + AluSx SINE Alu 1 300 -12 717 145 0 58 chr2 129112475 129112613 -121575241 + FLAM_C SINE Alu 1 130 -3 2238 129 19 19 chr2 129112620 129112984 -121574870 + THE1B LTR MaLR 1 364 0 529 270 176 36 chr2 129113074 129113296 -121574558 - MIR SINE MIR -9 253 1 282 267 60 35 chr2 129113498 129113614 -121574240 - MIR SINE MIR -74 134 16 805 181 8 0 chr2 129114141 129114268 -121573586 + FLAM_C SINE Alu 1 128 -5 433 326 128 5 chr2 129115284 129115502 -121572352 + MIR SINE MIR 8 252 -10 337 340 156 8 chr2 129115519 129115757 -121572097 + L2 LINE L2 3000 3272 0 1201 222 101 67 chr2 129115781 129116013 -121571841 - L2 LINE L2 -2 3311 3088 2221 114 0 10 chr2 129116013 129116319 -121571535 - AluSx SINE Alu -9 303 1 1201 222 101 67 chr2 129116319 129116563 -121571291 - L2 LINE L2 -225 3088 2819 233 263 217 34 chr2 129117782 129117957 -121569897 + MIR SINE MIR 1 207 -55 257 242 163 39 chr2 129118421 129118588 -121569266 + MIR3 SINE MIR 1 191 -65 196 171 24 0 chr2 129118631 129118672 -121569182 - L2 LINE L2 -78 3194 3153 503 88 0 0 chr2 129119506 129119574 -121568280 + U4 snRNA snRNA 1 68 -77 7333 185 86 87 chr2 129119997 129120075 -121567779 + L1MB3 LINE L1 1536 1613 -4806 1868 162 0 13 chr2 129120075 129120377 -121567477 - AluJb SINE Alu -14 298 1 7333 185 86 87 chr2 129120377 129120932 -121566922 + L1MB3 LINE L1 1613 2167 -4252 2475 80 0 13 chr2 129120932 129121245 -121566609 + AluSg SINE Alu 2 310 0 7333 185 86 87 chr2 129121245 129121658 -121566196 + L1MB3 LINE L1 2167 2579 -3840 324 48 0 0 chr2 129121658 129121700 -121566154 + (CA)n Simple_repeat Simple_repeat 2 43 0 7333 185 86 87 chr2 129121700 129121845 -121566009 + L1MB3 LINE L1 2579 2723 -3696 1907 143 0 20 chr2 129121845 129122138 -121565716 + AluJb SINE Alu 1 287 -25 7333 185 86 87 chr2 129122138 129123906 -121563948 + L1MB3 LINE L1 2723 4492 -1927 1275 163 35 0 chr2 129123906 129124109 -121563745 + AluJo SINE Alu 11 220 -92 7333 185 86 87 chr2 129124109 129125815 -121562039 + L1MB3 LINE L1 4492 6388 -31 898 174 12 29 chr2 129125832 129126004 -121561850 + FRAM SINE Alu 1 161 -15 549 256 64 14 chr2 129126075 129126294 -121561560 + L1MC4 LINE L1 7812 8041 -1 1153 262 107 57 chr2 129127272 129127952 -121559902 - MER21B LTR ERV1 -149 714 1 309 217 0 36 chr2 129127956 129128039 -121559815 - MER106B DNA MER1_type -944 115 36 208 218 77 51 chr2 129128937 129129015 -121558839 + MIR SINE MIR 19 98 -164 333 264 164 7 chr2 129130336 129130476 -121557378 + L1ME4a LINE L1 5943 6104 -17 538 150 120 45 chr2 129130613 129130746 -121557108 + FLAM_C SINE Alu 1 143 0 291 54 0 0 chr2 129130869 129130906 -121556948 + (TG)n Simple_repeat Simple_repeat 2 38 0 1274 157 40 5 chr2 129130906 129131104 -121556750 - AluJo SINE Alu -24 288 84 2265 84 0 34 chr2 129131278 129131599 -121556255 + AluY SINE Alu 1 310 -1 23 0 0 0 chr2 129131602 129131625 -121556229 + AT_rich Low_complexity Low_complexity 1 23 0 2175 89 24 0 chr2 129131987 129132280 -121555574 + AluY SINE Alu 11 310 -1 891 181 78 15 chr2 129134411 129134615 -121553239 - L1MD2 LINE L1 -22 6337 6121 2117 102 0 0 chr2 129134829 129135104 -121552750 - AluY SINE Alu -36 275 1 277 307 180 58 chr2 129135313 129136123 -121551731 + L2 LINE L2 2053 2961 -353 282 320 52 10 chr2 129136150 129136247 -121551607 + L2 LINE L2 3168 3268 -4 34 0 0 0 chr2 129137491 129137525 -121550329 + AT_rich Low_complexity Low_complexity 1 34 0 411 304 167 10 chr2 129138443 129138647 -121549207 - MIR SINE MIR -14 248 13 2300 81 0 7 chr2 129138702 129138998 -121548856 - AluY SINE Alu -17 294 1 2364 79 3 7 chr2 129139517 129139821 -121548033 + AluSq SINE Alu 1 303 -10 773 272 24 15 chr2 129139924 129140130 -121547724 + MIR SINE MIR 23 230 -32 292 263 11 53 chr2 129140154 129140249 -121547605 - MIR SINE MIR -150 112 22 798 103 0 89 chr2 129141368 129141514 -121546340 + FLAM_C SINE Alu 1 133 0 936 152 0 14 chr2 129141734 129141879 -121545975 + FLAM_C SINE Alu 1 143 0 2616 123 93 1 chr2 129143536 129143802 -121544052 + Tigger3(Golem) DNA MER2_type 1 241 -2787 321 26 0 0 chr2 129143802 129143840 -121544014 + (CA)n Simple_repeat Simple_repeat 1 38 0 1539 175 20 34 chr2 129143840 129144132 -121543722 - AluJo SINE Alu -24 288 1 2616 123 93 1 chr2 129144132 129144388 -121543466 + Tigger3(Golem) DNA MER2_type 240 3028 0 350 300 72 52 chr2 129145627 129145917 -121541937 - L1MC4a LINE L1 -1777 6291 5996 510 270 72 28 chr2 129145919 129146242 -121541612 - L1MC4a LINE L1 -593 5845 5532 2527 69 0 0 chr2 129146338 129146644 -121541210 - AluY SINE Alu -5 306 1 689 275 56 24 chr2 129147070 129147408 -121540446 + L1M4 LINE L1 4838 5186 -960 534 283 92 45 chr2 129147601 129148190 -121539664 - L1MDb LINE L1 -3615 2791 2213 238 224 0 45 chr2 129148458 129148525 -121539329 - L1MDb LINE L1 -4608 1798 1735 254 248 101 30 chr2 129148535 129148733 -121539121 - L1MDb LINE L1 -4869 1537 1326 263 233 68 0 chr2 129148882 129148955 -121538899 - L1MDb LINE L1 -5094 1302 1225 529 208 0 0 chr2 129148982 129149088 -121538766 - FLAM_A SINE Alu -17 125 20 309 159 0 58 chr2 129149110 129149216 -121538638 - L1MDb LINE L1 -5181 1225 1128 980 191 94 73 chr2 129150187 129150516 -121537338 - L1ME2 LINE L1 0 6164 5829 351 0 0 0 chr2 129150924 129150963 -121536891 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2042 106 61 0 chr2 129153354 129153647 -121534207 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr2 129153751 129153774 -121534080 + AT_rich Low_complexity Low_complexity 1 23 0 317 328 25 8 chr2 129154920 129155020 -121532834 + L2 LINE L2 3191 3295 -18 1559 148 139 3 chr2 129155020 129155337 -121532517 + MER46B DNA MER2_type 2 236 0 317 328 25 8 chr2 129155337 129155355 -121532499 + L2 LINE L2 3295 3311 -2 2361 89 0 7 chr2 129156682 129156986 -121530868 + AluSc SINE Alu 2 303 -6 1581 166 24 0 chr2 129157749 129158002 -121529852 - AluJo SINE Alu -15 297 39 461 259 19 57 chr2 129158094 129158252 -121529602 - MER5A DNA MER1_type 0 189 38 203 321 122 30 chr2 129158300 129158431 -121529423 + L2 LINE L2 2926 3068 -204 569 311 89 21 chr2 129158445 129158680 -121529174 + MIR SINE MIR 2 252 -10 1996 132 0 3 chr2 129160215 129160518 -121527336 + AluSx SINE Alu 5 306 -6 1637 229 132 129 chr2 129161151 129162213 -121525641 + MER52A LTR ERV1 659 1723 -32 375 259 82 48 chr2 129162255 129162402 -121525452 - L1ME4a LINE L1 -255 5866 5715 374 214 38 101 chr2 129162418 129162577 -121525277 + MER20B DNA MER1_type 1 149 -634 1339 274 155 12 chr2 129162853 129163356 -121524498 + L1MB7 LINE L1 11 585 -6274 860 161 109 0 chr2 129163417 129163591 -121524263 + AluSg/x SINE Alu 86 278 -34 719 250 75 18 chr2 129163644 129163732 -121524122 + L1MB7 LINE L1 3381 3463 -3494 1254 184 12 118 chr2 129163732 129164064 -121523790 + AluJo SINE Alu 1 297 -5 719 250 75 18 chr2 129164064 129164255 -121523599 + L1MB7 LINE L1 3463 3676 -3281 * 1790 259 64 3 chr2 129164233 129164813 -121523041 + L1MB7 LINE L1 5159 5773 -1184 2881 183 67 24 chr2 129164813 129165487 -121522367 + L1MB7 LINE L1 6287 6989 -6 1711 179 10 0 chr2 129165488 129165790 -121522064 + AluJb SINE Alu 1 305 -7 2205 97 0 13 chr2 129165813 129166123 -121521731 - AluSq SINE Alu -7 306 1 1036 149 105 18 chr2 129166134 129166362 -121521492 + MER96B DNA MER1_type? 105 352 -65 231 36 0 0 chr2 129166727 129166755 -121521099 + (TG)n Simple_repeat Simple_repeat 1 28 0 2568 162 38 32 chr2 129166879 129167379 -121520475 + MLT1D LTR MaLR 1 503 -2 2321 86 0 0 chr2 129167416 129167720 -121520134 - AluSc SINE Alu -5 304 1 667 233 114 86 chr2 129167872 129168231 -121519623 + L1ME4a LINE L1 5514 5894 -227 2032 80 33 4 chr2 129168231 129168507 -121519347 + AluSg SINE Alu 1 284 -26 667 233 114 86 chr2 129168507 129168671 -121519183 + L1ME4a LINE L1 5894 6052 -69 1760 157 67 26 chr2 129168693 129169037 -121518817 - MER47A DNA MER2_type -8 358 1 954 284 125 36 chr2 129169382 129169830 -121518024 + L2 LINE L2 2824 3311 -2 1846 137 7 7 chr2 129170181 129170473 -121517381 + AluSx SINE Alu 1 292 -20 546 298 88 6 chr2 129171341 129171522 -121516332 + L2 LINE L2 3117 3312 -1 808 93 9 0 chr2 129171612 129171720 -121516134 - FLAM_C SINE Alu -11 132 24 1652 83 4 21 chr2 129171794 129172034 -121515820 - AluSq SINE Alu -16 297 62 1160 144 0 42 chr2 129172128 129172343 -121515511 - AluJ SINE Alu 0 312 107 690 103 19 0 chr2 129172404 129172511 -121515343 - AluJ SINE Alu -203 109 1 280 179 0 0 chr2 129172659 129172726 -121515128 - L1MA3 LINE L1 0 6305 6239 181 349 60 0 chr2 129172788 129172871 -121514983 + L2 LINE L2 3184 3271 -1 21 0 0 0 chr2 129173487 129173508 -121514346 + GC_rich Low_complexity Low_complexity 1 21 0 1879 202 158 13 chr2 129174326 129174801 -121513053 + MER92C LTR ERV1 8 551 -3 370 354 38 6 chr2 129176015 129176173 -121511681 + MIR3 SINE MIR 23 185 -23 663 212 8 0 chr2 129176264 129176382 -121511472 + MIR SINE MIR 72 190 -72 244 123 86 12 chr2 129176383 129176464 -121511390 + (TA)n Simple_repeat Simple_repeat 1 87 0 2127 121 0 0 chr2 129176507 129176804 -121511050 - AluSx SINE Alu -15 297 1 2928 132 39 0 chr2 129176804 129177245 -121510609 + LTR24 LTR ERV1 10 467 0 1246 266 83 13 chr2 129177557 129177944 -121509910 - MLT1J2 LTR MaLR -22 428 15 715 195 135 55 chr2 129178762 129178962 -121508892 + MER20 DNA MER1_type 4 219 0 513 267 73 42 chr2 129179258 129179449 -121508405 + MIR SINE MIR 23 219 -43 272 294 96 7 chr2 129180143 129180289 -121507565 + L1ME LINE L1 5623 5781 -340 1762 219 120 5 chr2 129181603 129182180 -121505674 - MER21B LTR ERV1 -44 819 98 2087 60 18 25 chr2 129182232 129182533 -121505321 - AluY SINE Alu 0 300 2 410 205 0 36 chr2 129182534 129182617 -121505237 - MER21B LTR ERV1 -779 84 5 191 282 200 0 chr2 129183529 129183614 -121504240 - MIR SINE MIR -112 150 49 302 211 93 12 chr2 129183810 129183927 -121503927 - MIR SINE MIR -53 155 27 1249 135 63 1 chr2 129184261 129184686 -121503168 - LTR54 LTR ERV1 0 510 1 557 133 186 35 chr2 129184804 129184917 -121502937 + AluJb SINE Alu 3 132 -180 238 150 17 17 chr2 129184917 129184977 -121502877 + GA-rich Low_complexity Low_complexity 2 61 0 242 154 0 0 chr2 129185079 129185118 -121502736 + Alu SINE Alu 250 288 -11 1366 224 12 25 chr2 129185122 129185448 -121502406 + L1MB7 LINE L1 4541 4862 -1284 910 153 49 76 chr2 129185441 129185499 -121502355 - L1MC2 LINE L1 0 6344 6286 * 1856 142 0 23 chr2 129185499 129185809 -121502045 + AluJo SINE Alu 1 303 -9 910 153 49 76 chr2 129185809 129185973 -121501881 - L1MC2 LINE L1 -58 6286 6128 * 4003 170 73 31 chr2 129185950 129187222 -121500632 + L1MB7 LINE L1 4847 6183 -1 225 276 132 13 chr2 129187712 129187788 -121500066 + MIR SINE MIR 13 97 -165 2024 126 7 0 chr2 129188189 129188490 -121499364 + AluSx SINE Alu 1 303 -9 730 140 0 59 chr2 129189206 129189342 -121498512 + FLAM_C SINE Alu 5 132 -11 2284 129 19 19 chr2 129189347 129189711 -121498143 + THE1B LTR MaLR 1 364 0 537 270 176 36 chr2 129189801 129190023 -121497831 - MIR SINE MIR -9 253 1 329 343 157 8 chr2 129190115 129190351 -121497503 + L2 LINE L2 3002 3272 0 1253 231 82 68 chr2 129190375 129190607 -121497247 - L2 LINE L2 -2 3311 3084 2107 104 0 10 chr2 129190607 129190904 -121496950 - AluSx SINE Alu -9 303 10 1253 231 82 68 chr2 129190904 129191157 -121496697 - L2 LINE L2 -229 3084 2819 244 263 217 34 chr2 129192376 129192551 -121495303 + MIR SINE MIR 1 207 -55 262 219 156 39 chr2 129193015 129193143 -121494711 + MIR3 SINE MIR 1 143 -65 204 171 24 0 chr2 129193224 129193265 -121494589 - L2 LINE L2 -78 3194 3153 183 80 0 0 chr2 129194058 129194083 -121493771 + (GGA)n Simple_repeat Simple_repeat 3 27 0 322 252 92 34 chr2 129194098 129194217 -121493637 + L2 LINE L2 3147 3272 0 1203 126 66 0 chr2 129194630 129194813 -121493041 + MER3 DNA MER1_type 14 208 -1 2205 102 3 0 chr2 129194900 129195205 -121492649 - AluSx SINE Alu -6 306 1 379 267 185 27 chr2 129195227 129195373 -121492481 + MIR SINE MIR 57 225 -37 3921 98 46 18 chr2 129196035 129196496 -121491358 - L1PB2 LINE L1 -10 6141 5658 2376 88 0 0 chr2 129196496 129196804 -121491050 - AluSx SINE Alu -4 308 1 3921 98 46 18 chr2 129196804 129196946 -121490908 - L1PB2 LINE L1 -493 5658 5521 1317 167 11 93 chr2 129198914 129199388 -121488466 - LTR5 LTR ERVK 0 969 535 4092 131 9 11 chr2 129199498 129200153 -121487701 - LTR5 LTR ERVK -315 654 1 228 232 14 0 chr2 129200273 129200342 -121487512 + CT-rich Low_complexity Low_complexity 1 70 0 22 0 0 30 chr2 129200343 129200356 -121487498 + AT_rich Low_complexity Low_complexity 1 13 -19 1951 75 0 85 chr2 129200356 129200674 -121487180 - AluY SINE Alu -20 291 1 22 0 0 30 chr2 129200674 129200693 -121487161 + AT_rich Low_complexity Low_complexity 13 32 0 943 188 0 18 chr2 129200693 129200863 -121486991 - AluJo SINE Alu -25 287 121 24 67 0 0 chr2 129200863 129200908 -121486946 + AT_rich Low_complexity Low_complexity 1 45 0 387 190 13 0 chr2 129200932 129201011 -121486843 + MER116 DNA Mariner 1 80 0 2112 91 0 49 chr2 129201017 129201179 -121486675 - AluSg SINE Alu -17 293 152 2537 46 0 0 chr2 129201179 129201483 -121486371 - AluY SINE Alu -7 304 1 2112 91 0 49 chr2 129201483 129201628 -121486226 - AluSg SINE Alu -158 152 1 444 289 122 5 chr2 129201726 129201923 -121485931 - L1MC/D LINE L1 -2065 5743 5524 264 315 47 16 chr2 129202830 129202957 -121484897 + MIR SINE MIR 99 229 -33 700 199 6 6 chr2 129203365 129203541 -121484313 + (TCCA)n Simple_repeat Simple_repeat 1 176 0 681 217 0 0 chr2 129203553 129203733 -121484121 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 200 159 0 23 chr2 129203759 129203803 -121484051 + (TCCA)n Simple_repeat Simple_repeat 4 46 0 248 311 201 30 chr2 129204037 129204365 -121483489 - L2 LINE L2 -368 2946 2563 3282 219 43 5 chr2 129204376 129205016 -121482838 - L1MEc LINE L1 -2449 3766 3081 2274 83 3 0 chr2 129205016 129205316 -121482538 - AluSg SINE Alu -9 301 1 3282 219 43 5 chr2 129205316 129205560 -121482294 - L1MEc LINE L1 -3134 3081 2848 632 262 29 6 chr2 129205560 129205757 -121482097 - L1MEc LINE L1 -3662 2553 2348 324 70 0 0 chr2 129205758 129205801 -121482053 + (TTTC)n Simple_repeat Simple_repeat 3 45 0 259 178 0 149 chr2 129205876 129205927 -121481927 - L1MEc LINE L1 -3993 2403 2375 719 137 73 0 chr2 129205927 129206051 -121481803 - L1PA16 LINE L1 -9 6157 6025 259 178 0 149 chr2 129206051 129206106 -121481748 - L1MEc LINE L1 -4021 2375 2313 366 278 81 37 chr2 129206184 129206457 -121481397 - L2 LINE L2 -893 2421 2137 1794 142 28 0 chr2 129206886 129207174 -121480680 + AluSx SINE Alu 1 296 -16 800 205 6 26 chr2 129207482 129207632 -121480222 - MLT1F1 LTR MaLR 0 567 421 919 153 16 116 chr2 129207632 129207874 -121479980 - MLT1B LTR MaLR 0 390 173 1071 208 150 3 chr2 129207884 129208232 -121479622 - MLT1F1 LTR MaLR -140 402 1 394 100 29 14 chr2 129208773 129208843 -121479011 - L1MA6 LINE L1 0 6300 6230 261 326 92 28 chr2 129209509 129209650 -121478204 + MIR SINE MIR 20 169 -93 12315 176 13 14 chr2 129209752 129210660 -121477194 - L1PBa LINE L1 -1384 5478 4570 2309 96 4 0 chr2 129210660 129210974 -121476880 - AluSp SINE Alu 0 317 3 12315 176 13 14 chr2 129210974 129211552 -121476302 - L1PBa LINE L1 -2292 4570 3993 2259 101 10 3 chr2 129211552 129211849 -121476005 - AluSq SINE Alu -14 299 1 12315 176 13 14 chr2 129211849 129214223 -121473631 - L1PBa LINE L1 -2869 3993 1560 5503 135 4 37 chr2 129214226 129215600 -121472254 + L1PB1 LINE L1 4771 6099 -52 213 314 0 14 chr2 129215788 129215858 -121471996 + MIR SINE MIR 25 93 -115 235 320 78 10 chr2 129216149 129216252 -121471602 - L2 LINE L2 -4 3268 3159 1941 148 30 3 chr2 129216618 129216921 -121470933 - AluJb SINE Alu -1 311 1 1926 97 23 15 chr2 129217873 129218132 -121469722 - AluSx SINE Alu -18 294 34 436 270 101 40 chr2 129218240 129218388 -121469466 - MIR SINE MIR -72 190 34 1087 238 57 37 chr2 129218393 129218830 -121469024 - MLT1B LTR MaLR -11 455 4 1723 136 58 58 chr2 129218894 129219079 -121468775 - AluSg SINE Alu -1 309 122 2358 100 3 0 chr2 129219079 129219388 -121468466 - AluSg SINE Alu 0 310 1 1723 136 58 58 chr2 129219388 129219511 -121468343 - AluSg SINE Alu -187 123 1 192 77 0 0 chr2 129220607 129220633 -121467221 + (GGAGA)n Simple_repeat Simple_repeat 1 26 0 698 214 0 0 chr2 129223725 129223856 -121463998 + FLAM_C SINE Alu 2 132 -1 282 29 0 0 chr2 129224265 129224300 -121463554 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 603 256 92 22 chr2 129224306 129224579 -121463275 - L2 LINE L2 -20 3293 3002 267 272 61 82 chr2 129224598 129224745 -121463109 - MIR SINE MIR -72 190 47 2301 97 0 7 chr2 129225217 129225515 -121462339 + AluSq SINE Alu 1 296 -17 2325 119 0 0 chr2 129225528 129225830 -121462024 + AluSx SINE Alu 1 302 -10 299 194 352 0 chr2 129225833 129225941 -121461913 + L1MC5 LINE L1 7730 7875 -86 183 280 40 0 chr2 129225944 129225994 -121461860 - MER5A DNA MER1_type -10 179 128 582 352 28 4 chr2 129226831 129227084 -121460770 - LTR16B LTR ERVL -18 446 188 2680 210 56 62 chr2 129227187 129228071 -121459783 - L1ME1 LINE L1 -1 6165 5284 2549 84 3 0 chr2 129228071 129228382 -121459472 - AluSp SINE Alu -1 312 1 2680 210 56 62 chr2 129228382 129228687 -121459167 - L1ME1 LINE L1 -882 5284 4979 2113 132 7 0 chr2 129228739 129229034 -121458820 + AluSx SINE Alu 1 297 -15 571 169 0 32 chr2 129229044 129229198 -121458656 + CT-rich Low_complexity Low_complexity 3 151 0 1230 235 40 15 chr2 129229217 129229545 -121458309 - L1ME1 LINE L1 -1198 4948 4613 404 244 98 0 chr2 129229612 129229735 -121458119 + MER103 DNA DNA 31 165 -1 332 264 146 33 chr2 129229775 129229987 -121457867 - MER112 DNA MER1_type -12 248 13 201 351 49 27 chr2 129230086 129230271 -121457583 + L2 LINE L2 2673 2861 -453 1940 140 7 24 chr2 129230854 129231147 -121456707 + AluSx SINE Alu 1 288 -24 740 216 46 0 chr2 129231340 129231493 -121456361 + MER45A DNA AcHobo 17 176 -2 543 225 51 0 chr2 129231762 129231900 -121455954 - MIR SINE MIR -55 207 63 1154 171 0 6 chr2 129232325 129232501 -121455353 - AluJo SINE Alu -115 197 23 1394 175 0 0 chr2 129232603 129232814 -121455040 + AluJo SINE Alu 86 296 -16 185 278 19 0 chr2 129234379 129234433 -121453421 + L2 LINE L2 3217 3271 -1 205 318 0 0 chr2 129234484 129234550 -121453304 - MIR SINE MIR -81 127 62 321 317 58 64 chr2 129235257 129235882 -121451972 + L1MEd LINE L1 593 1213 -4906 298 290 75 0 chr2 129235889 129235996 -121451858 + L1M4 LINE L1 4872 4986 -1160 2073 123 7 3 chr2 129236176 129236487 -121451367 - AluSq SINE Alu 0 312 1 189 238 32 16 chr2 129236842 129236905 -121450949 - L2 LINE L2 -646 2668 2605 205 282 105 8 chr2 129238679 129238803 -121449051 + MIR SINE MIR 16 151 -111 260 248 132 0 chr2 129241141 129241262 -121446592 + MIR3 SINE MIR 5 141 -67 4671 166 55 1 chr2 129241699 129242842 -121445012 - L1MB8 LINE L1 -5 6173 4966 2153 139 10 45 chr2 129243932 129244158 -121443696 - MLT1B LTR MaLR 0 390 183 2442 110 0 0 chr2 129244158 129244468 -121443386 - AluSg SINE Alu 0 310 1 2153 139 10 45 chr2 129244468 129244645 -121443209 - MLT1B LTR MaLR -207 183 1 903 141 11 11 chr2 129245287 129245464 -121442390 + (TGGG)n Simple_repeat Simple_repeat 4 180 0 903 183 4 0 chr2 129245487 129245995 -121441859 + (TGGG)n Simple_repeat Simple_repeat 1 510 0 850 191 10 5 chr2 129246142 129246567 -121441287 + (TGGG)n Simple_repeat Simple_repeat 1 427 0 184 300 43 43 chr2 129246937 129247007 -121440847 - MIR SINE MIR -107 155 86 202 326 41 0 chr2 129247032 129247130 -121440724 + MIR SINE MIR 44 145 -63 1863 132 52 31 chr2 129247517 129247804 -121440050 + AluJo SINE Alu 3 295 -17 231 244 236 8 chr2 129248037 129248160 -121439694 + MIR SINE MIR 42 192 -70 2348 90 0 13 chr2 129248712 129249024 -121438830 + AluSx SINE Alu 1 308 -4 210 196 20 20 chr2 129249671 129249722 -121438132 + CT-rich Low_complexity Low_complexity 1 51 0 9064 127 11 2 chr2 129251195 129252678 -121435176 - L1P LINE L1 -2122 4024 2528 611 133 26 0 chr2 129253869 129253982 -121433872 - L1MD2 LINE L1 -3 6356 6241 9946 213 60 24 chr2 129253982 129254203 -121433651 - L1MD1 LINE L1 -185 6451 6239 1935 144 0 11 chr2 129254203 129254529 -121433325 - AluJb SINE Alu 0 323 1 9946 213 60 24 chr2 129254529 129257020 -121430834 - L1MD1 LINE L1 -397 6239 3839 2344 91 3 0 chr2 129257020 129257329 -121430525 + AluSq SINE Alu 1 310 0 9946 213 60 24 chr2 129257329 129258363 -121429491 - L1MD1 LINE L1 -2797 3839 2543 764 218 76 10 chr2 129258363 129258560 -121429294 + MER6B DNA MER2_type 1 210 0 9946 213 60 24 chr2 129258560 129258957 -121428897 - L1MD1 LINE L1 -4093 2543 2162 1879 173 6 13 chr2 129258957 129259269 -121428585 + AluJo SINE Alu 1 310 -2 10774 116 19 19 chr2 129259275 129259313 -121428541 - Tigger1 DNA MER2_type -588 1830 1793 2033 150 0 3 chr2 129259313 129259606 -121428248 + AluJb SINE Alu 6 297 -15 10774 116 19 19 chr2 129259606 129260443 -121427411 - Tigger1 DNA MER2_type -625 1793 957 2257 94 0 3 chr2 129260443 129260741 -121427113 + AluSg SINE Alu 1 297 -13 10774 116 19 19 chr2 129260741 129261694 -121426160 - Tigger1 DNA MER2_type -1460 958 1 2149 122 3 3 chr2 129261906 129262209 -121425645 + AluSq SINE Alu 1 303 -10 333 361 54 0 chr2 129263129 129263259 -121424595 - MIR SINE MIR -108 154 18 202 320 27 13 chr2 129263565 129263640 -121424214 - MIR SINE MIR -7 255 180 186 327 50 10 chr2 129265051 129265152 -121422702 + MIR3 SINE MIR 96 200 -8 282 352 150 9 chr2 129266903 129267130 -121420724 - MIR SINE MIR 0 262 4 1592 178 132 12 chr2 129267484 129267945 -121419909 - MLT1F1 LTR MaLR 0 567 2 215 338 36 36 chr2 129268508 129268647 -121419207 + MIR3 SINE MIR 8 146 -62 211 327 32 44 chr2 129268901 129269032 -121418822 + MIR SINE MIR 24 155 -60 2373 244 56 43 chr2 129269690 129270637 -121417217 - L1ME LINE L1 -4918 1088 221 315 320 56 8 chr2 129271546 129271671 -121416183 - L2 LINE L2 -2 3270 3140 433 113 0 0 chr2 129271853 129271915 -121415939 - LTR3b LTR ERVK -1 499 438 2098 172 34 61 chr2 129271915 129272356 -121415498 - LTR3 LTR ERVK 0 429 1 439 66 0 0 chr2 129272371 129272432 -121415422 - HERVK14 LTR ERVK -62 5883 5823 2012 124 50 42 chr2 129272432 129272850 -121415004 - HERVK14 LTR ERVK -388 5557 3004 4798 204 29 1 chr2 129272850 129273802 -121414052 - HERVK14 LTR ERVK -4940 2303 1325 468 231 0 29 chr2 129273795 129273899 -121413955 - HERVK14 LTR ERVK -6563 680 580 * 466 157 96 170 chr2 129273957 129274074 -121413780 - HERVK14 LTR ERVK -6977 266 173 2813 13 0 0 chr2 129274074 129274388 -121413466 - AluYb8 SINE Alu -4 314 1 466 157 96 170 chr2 129274388 129274499 -121413355 - HERVK14 LTR ERVK -7070 173 55 357 175 0 0 chr2 129274754 129274817 -121413037 - LTR3b LTR ERVK 0 500 438 2178 180 23 50 chr2 129274817 129275256 -121412598 - LTR3 LTR ERVK 0 429 3 237 358 165 4 chr2 129275317 129275577 -121412277 - L2 LINE L2 -526 2788 2487 244 222 89 15 chr2 129275577 129275712 -121412142 + (TTGG)n Simple_repeat Simple_repeat 4 148 0 236 231 83 18 chr2 129275742 129275911 -121411943 + (GGTTG)n Simple_repeat Simple_repeat 1 180 0 * 322 156 88 12 chr2 129275789 129275949 -121411905 + (TGGG)n Simple_repeat Simple_repeat 3 174 0 197 345 17 35 chr2 129276005 129276121 -121411733 - L2 LINE L2 -814 2500 2387 646 241 54 0 chr2 129276126 129276292 -121411562 - MER63A DNA MER1_type -35 175 1 207 182 36 55 chr2 129277181 129277236 -121410618 + MIR SINE MIR 93 146 -62 2265 101 10 0 chr2 129277840 129278147 -121409707 - AluSx SINE Alu -2 310 1 254 294 117 49 chr2 129278321 129278484 -121409370 - L1ME LINE L1 -465 5656 5483 287 346 59 0 chr2 129281175 129281311 -121406543 + MIR SINE MIR 2 145 -117 2181 108 7 0 chr2 129283083 129283379 -121404475 + AluSx SINE Alu 1 298 -14 236 261 112 90 chr2 129284551 129284685 -121403169 - MIR SINE MIR -102 160 24 297 0 0 0 chr2 129285130 129285163 -121402691 + (GGGTG)n Simple_repeat Simple_repeat 3 35 0 263 299 26 0 chr2 129285266 129285343 -121402511 + MIR3 SINE MIR 90 168 -40 326 213 41 23 chr2 129285464 129285572 -121402282 - MIR SINE MIR -63 145 43 262 341 34 0 chr2 129285799 129285887 -121401967 - MIR SINE MIR -64 198 108 190 259 165 12 chr2 129286071 129286156 -121401698 + MIR SINE MIR 48 145 -63 207 288 17 0 chr2 129286568 129286627 -121401227 + L2 LINE L2 3242 3301 -12 275 304 163 18 chr2 129286784 129287011 -121400843 - L2 LINE L2 -7 3265 3006 188 285 89 32 chr2 129287166 129287289 -121400565 - MIR3 SINE MIR -78 130 1 272 278 21 10 chr2 129287498 129287595 -121400259 + (CACCC)n Simple_repeat Simple_repeat 3 100 0 267 231 62 0 chr2 129288556 129288621 -121399233 + MIR SINE MIR 82 150 -112 189 278 63 48 chr2 129291498 129291624 -121396230 - L2 LINE L2 -208 3064 2937 193 137 59 0 chr2 129294459 129294510 -121393344 + CT-rich Low_complexity Low_complexity 4 57 0 217 338 12 25 chr2 129295683 129295843 -121392011 + G-rich Low_complexity Low_complexity 5 162 0 188 309 100 9 chr2 129296275 129296385 -121391469 + L2 LINE L2 2857 2976 -337 564 264 80 24 chr2 129301668 129301880 -121385974 + MIR SINE MIR 22 245 -17 270 214 14 14 chr2 129303746 129303816 -121384038 + MER45 DNA AcHobo 1510 1579 -2 195 336 23 70 chr2 129303905 129304033 -121383821 + MIR SINE MIR 35 156 -106 1990 92 25 65 chr2 129305197 129305522 -121382332 + AluJb SINE Alu 1 312 0 431 28 69 0 chr2 129305522 129305594 -121382260 + G-rich Low_complexity Low_complexity 2 78 0 346 300 55 0 chr2 129305597 129305707 -121382147 + L1M4 LINE L1 3082 3197 -2949 462 18 0 0 chr2 129305736 129305791 -121382063 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 261 347 84 32 chr2 129309853 129310043 -121377811 - L2 LINE L2 -869 2445 2246 271 290 123 49 chr2 129311946 129312108 -121375746 + L1ME LINE L1 5483 5656 -465 1993 103 27 7 chr2 129312282 129312583 -121375271 + AluSx SINE Alu 1 307 -5 1819 79 0 61 chr2 129316432 129316711 -121371143 - L1PA4 LINE L1 0 6155 5894 360 356 69 0 chr2 129316968 129317142 -121370712 - MIR SINE MIR -57 205 20 183 225 0 113 chr2 129317938 129318009 -121369845 - MIR SINE MIR -102 160 98 252 0 0 0 chr2 129318515 129318543 -121369311 + (GGGTG)n Simple_repeat Simple_repeat 3 30 0 239 229 21 21 chr2 129319478 129319574 -121368280 + L2 LINE L2 2483 2578 -736 1615 238 74 8 chr2 129319575 129319966 -121367888 + MER63B DNA MER1_type 2 418 -18 523 295 51 71 chr2 129319966 129320087 -121367767 + L2 LINE L2 2593 2715 -599 2245 84 10 3 chr2 129320087 129320397 -121367457 - AluSx SINE Alu 0 312 1 523 295 51 71 chr2 129320397 129320668 -121367186 + L2 LINE L2 2715 2977 -337 1900 117 3 3 chr2 129322983 129323266 -121364588 + AluSg SINE Alu 15 297 -13 6103 126 24 6 chr2 129323266 129324220 -121363634 - Tigger1 DNA MER2_type -1447 971 1 1756 114 3 38 chr2 129324432 129324749 -121363105 + AluSq SINE Alu 1 306 -7 5316 162 55 6 chr2 129326391 129327386 -121360468 + MSTA-int LTR MaLR 608 1651 0 2638 123 64 12 chr2 129327386 129327557 -121360297 + MSTA LTR MaLR 1 162 -266 1979 135 7 3 chr2 129327557 129327854 -121360000 + AluSx SINE Alu 1 298 -14 2638 123 64 12 chr2 129327854 129328089 -121359765 + MSTA LTR MaLR 162 428 0 284 194 9 12 chr2 129328090 129328170 -121359684 + L1MCa LINE L1 1255 1387 -5041 28 0 0 0 chr2 129328175 129328203 -121359651 + AT_rich Low_complexity Low_complexity 1 28 0 1364 218 0 0 chr2 129328212 129328469 -121359385 - AluJo SINE Alu -31 281 25 508 221 83 55 chr2 129328964 129329145 -121358709 - MIR SINE MIR -62 200 15 1576 129 51 37 chr2 129329234 129329529 -121358325 + AluJb SINE Alu 13 311 -1 1892 120 20 0 chr2 129331306 129331598 -121356256 - AluSx SINE Alu -14 298 1 1761 224 64 10 chr2 129333139 129333625 -121354229 + L1M4 LINE L1 4038 4549 -1597 1013 198 42 0 chr2 129333616 129333808 -121354046 - L1MD2 LINE L1 -328 6031 5832 * 883 184 48 44 chr2 129333812 129334014 -121353840 - L1MDa LINE L1 -4089 2451 2246 2022 196 91 39 chr2 129334014 129334508 -121353346 - MLT2B1 LTR ERVL 0 520 1 883 184 48 44 chr2 129334508 129334555 -121353299 - L1MDa LINE L1 -4294 2246 2201 * 1293 240 118 31 chr2 129334534 129334984 -121352870 - L1MDa LINE L1 -5903 818 330 3558 209 93 30 chr2 129335021 129335064 -121352790 + L1M4 LINE L1 3530 3569 -2577 2236 110 7 0 chr2 129335064 129335374 -121352480 + AluSx SINE Alu 1 312 0 3558 209 93 30 chr2 129335374 129336439 -121351415 + L1M4 LINE L1 3569 4708 -1438 2210 119 3 0 chr2 129336440 129336751 -121351103 + AluSx SINE Alu 1 312 0 256 333 81 0 chr2 129336874 129336985 -121350869 + AluSg SINE Alu 5 124 -176 270 303 21 28 chr2 129337142 129337284 -121350570 + L2 LINE L2 3118 3258 -55 1863 98 8 0 chr2 129337865 129338120 -121349734 + AluSq SINE Alu 48 304 -9 227 156 25 66 chr2 129339120 129339242 -121348612 + C-rich Low_complexity Low_complexity 5 121 0 2426 204 87 41 chr2 129340035 129340941 -121346913 - L1MB8 LINE L1 -50 6134 5272 2194 94 0 13 chr2 129340941 129341239 -121346615 - AluSx SINE Alu -18 294 1 2426 204 87 41 chr2 129341239 129341574 -121346280 - L1MB8 LINE L1 -912 5272 4810 1681 161 29 4 chr2 129341574 129341853 -121346001 - AluJb SINE Alu -26 286 1 2426 204 87 41 chr2 129341853 129341953 -121345901 - L1MB8 LINE L1 -1374 4810 4716 598 199 6 22 chr2 129342060 129342241 -121345613 + Charlie1 DNA MER1_type 2583 2760 -1 647 291 35 25 chr2 129342243 129342442 -121345412 - MIR SINE MIR -60 202 2 1691 220 39 48 chr2 129342853 129343266 -121344588 - LTR2 LTR ERV1 0 449 41 850 183 0 43 chr2 129343419 129343583 -121344271 - FRAM SINE Alu -2 174 18 859 185 0 29 chr2 129343816 129343989 -121343865 + AluJo SINE Alu 121 288 -24 899 206 0 0 chr2 129344384 129344549 -121343305 + AluJb SINE Alu 147 311 -1 634 107 0 27 chr2 129344566 129344678 -121343176 + (GAAA)n Simple_repeat Simple_repeat 4 112 0 28 48 0 0 chr2 129344833 129344875 -121342979 + AT_rich Low_complexity Low_complexity 1 42 0 909 196 0 32 chr2 129346287 129346476 -121341378 - FRAM SINE Alu 0 176 1 281 254 14 0 chr2 129348835 129348906 -121338948 + L1M4 LINE L1 3743 3814 -2332 1125 193 4 75 chr2 129348941 129349221 -121338633 + L1M4 LINE L1 2 261 -6281 564 261 37 29 chr2 129349250 129349358 -121338496 + L1M4 LINE L1 3844 3950 -2694 2081 142 32 29 chr2 129349358 129349732 -121338122 - THE1C LTR MaLR 0 375 1 564 261 37 29 chr2 129349732 129349868 -121337986 + L1M4 LINE L1 3950 4090 -2554 1194 128 27 5 chr2 129349868 129350055 -121337799 + AluSg/x SINE Alu 119 309 -1 3633 200 94 29 chr2 129350064 129351121 -121336733 + L1M4 LINE L1 4082 5206 -1438 2255 119 0 0 chr2 129351122 129351434 -121336420 + AluSx SINE Alu 1 312 0 25 51 0 0 chr2 129351450 129351489 -121336365 + AT_rich Low_complexity Low_complexity 1 39 0 967 221 55 11 chr2 129351816 129352087 -121335767 + L1MB7 LINE L1 5902 6184 0 2034 124 0 10 chr2 129352584 129352883 -121334971 + AluSg SINE Alu 1 296 -14 351 262 74 40 chr2 129352964 129353113 -121334741 - MER63A DNA MER1_type 0 210 57 205 305 234 0 chr2 129353584 129353725 -121334129 + MIR3 SINE MIR 34 207 -1 385 271 109 21 chr2 129357300 129357492 -121330362 + L2 LINE L2 2483 2691 -623 643 148 0 82 chr2 129357644 129357766 -121330088 - FLAM_A SINE Alu -20 122 11 229 213 16 16 chr2 129357793 129357854 -121330000 - L1MC4 LINE L1 -156 7886 7826 757 210 96 120 chr2 129357892 129358216 -121329638 - L1ME2 LINE L1 -10 6154 5839 687 288 140 15 chr2 129358293 129358693 -121329161 + L2 LINE L2 2809 3258 -55 1763 93 8 8 chr2 129359274 129359520 -121328334 + AluSx SINE Alu 48 293 -19 1620 159 6 52 chr2 129359913 129360239 -121327615 + AluJb SINE Alu 1 311 -1 1553 159 89 4 chr2 129360843 129361113 -121326741 - AluJb SINE Alu -19 293 1 2308 119 0 0 chr2 129361121 129361424 -121326430 - AluSx SINE Alu -9 303 1 1957 103 0 11 chr2 129361621 129361902 -121325952 + AluY SINE Alu 2 279 -32 4674 138 0 19 chr2 129362887 129363588 -121324266 + LTR12 LTR ERV1 1 688 0 262 241 0 0 chr2 129364655 129364713 -121323141 - MIR SINE MIR -124 138 81 345 356 69 0 chr2 129364936 129365110 -121322744 + MIR SINE MIR 20 205 -57 609 154 9 9 chr2 129365368 129365478 -121322376 + L1PA4 LINE L1 5894 6003 -152 267 363 13 25 chr2 129365486 129365643 -121322211 + C-rich Low_complexity Low_complexity 1 155 0 311 120 20 0 chr2 129365873 129365923 -121321931 + Alu SINE Alu 239 289 -12 2093 107 46 0 chr2 129365930 129366210 -121321644 + AluSx SINE Alu 1 293 -19 1798 93 0 0 chr2 129366387 129366612 -121321242 - AluSx SINE Alu -87 225 1 374 279 124 65 chr2 129366685 129366728 -121321126 + L1MC4a LINE L1 6130 6169 -1639 1657 194 0 10 chr2 129366728 129367032 -121320822 + AluJb SINE Alu 3 303 -9 374 279 124 65 chr2 129367032 129367278 -121320576 + L1MC4a LINE L1 6169 6436 -1372 2000 128 49 0 chr2 129367328 129367616 -121320238 + AluSx SINE Alu 1 302 -10 578 244 153 18 chr2 129367616 129367845 -121320009 + L1MC4a LINE L1 6572 6831 -977 994 146 0 0 chr2 129367856 129368007 -121319847 + FRAM SINE Alu 25 175 -1 533 252 151 50 chr2 129368025 129368070 -121319784 + L1MC4 LINE L1 7601 7640 -402 2421 67 34 0 chr2 129368070 129368368 -121319486 + AluY SINE Alu 1 308 -3 533 252 151 50 chr2 129368368 129368719 -121319135 + L1MC4 LINE L1 7640 8037 -5 330 286 164 31 chr2 129368692 129369010 -121318844 + L1MC4 LINE L1 7049 7408 -634 * 1932 150 6 13 chr2 129369100 129369414 -121318440 - AluJb SINE Alu 0 312 1 358 214 51 20 chr2 129369415 129369513 -121318341 + L1MC5 LINE L1 7278 7378 -583 909 178 15 51 chr2 129369982 129370179 -121317675 + AluJb SINE Alu 120 309 -3 22 0 0 0 chr2 129370179 129370201 -121317653 + AT_rich Low_complexity Low_complexity 1 22 0 2414 91 10 0 chr2 129370231 129370539 -121317315 - AluSx SINE Alu -1 311 1 370 286 107 19 chr2 129370838 129371044 -121316810 + L1MC4 LINE L1 7802 8025 -17 2179 109 10 10 chr2 129371044 129371338 -121316516 - AluSq SINE Alu -19 294 1 851 179 0 0 chr2 129371888 129372022 -121315832 + FRAM SINE Alu 38 171 -5 332 266 29 28 chr2 129372269 129372416 -121315438 - MIR SINE MIR -65 143 20 1091 81 0 7 chr2 129372645 129372781 -121315073 + AluSq/x SINE Alu 1 135 -177 2606 49 0 7 chr2 129372781 129373088 -121314766 + AluY SINE Alu 1 305 -6 2634 62 0 0 chr2 129373460 129373767 -121314087 - AluSx SINE Alu -5 307 1 243 188 0 0 chr2 129374074 129374122 -121313732 + (TA)n Simple_repeat Simple_repeat 1 48 0 1243 218 130 3 chr2 129375703 129376042 -121311812 + L1ME3 LINE L1 5556 5937 -225 698 214 68 73 chr2 129376087 129376293 -121311561 + AluJo SINE Alu 84 288 -24 379 257 165 18 chr2 129376299 129376517 -121311337 + L1ME4a LINE L1 5615 5864 -257 1273 175 96 39 chr2 129376526 129376688 -121311166 - AluJo SINE Alu -16 296 110 1461 177 100 51 chr2 129376688 129377117 -121310737 + LTR7 LTR ERV1 1 450 0 1273 175 96 39 chr2 129377117 129377234 -121310620 - AluJo SINE Alu -202 110 1 345 262 56 51 chr2 129377650 129377864 -121309990 + L1MC5 LINE L1 7362 7576 -385 2481 91 0 0 chr2 129377920 129378227 -121309627 - AluSx SINE Alu -5 307 1 1184 240 122 32 chr2 129378307 129378741 -121309113 + L1MEc LINE L1 330 802 -5919 886 164 56 52 chr2 129378736 129378783 -121309071 + L1MEc LINE L1 2201 2246 -4294 * 1953 186 103 51 chr2 129378783 129379277 -121308577 + MLT2B1 LTR ERVL 1 520 0 886 164 56 52 chr2 129379277 129379479 -121308375 + L1MEc LINE L1 2246 2451 -4089 1003 198 42 0 chr2 129379483 129379675 -121308179 + L1MD2 LINE L1 5832 6031 -328 * 2670 207 41 81 chr2 129379666 129380175 -121307679 - L1M4 LINE L1 -1597 4549 4022 1686 152 0 45 chr2 129380175 129380464 -121307390 + AluJo SINE Alu 11 286 -26 2670 207 41 81 chr2 129380464 129380600 -121307254 - L1M4 LINE L1 -2124 4022 3882 2318 116 0 0 chr2 129380600 129380894 -121306960 + AluSg SINE Alu 1 294 -16 2670 207 41 81 chr2 129380894 129381140 -121306714 - L1M4 LINE L1 -2264 3882 3692 1775 227 28 108 chr2 129381254 129381816 -121306038 - L1M4c LINE L1 -4535 2603 1998 1490 212 0 38 chr2 129381816 129382108 -121305746 + AluJo SINE Alu 1 281 -31 1775 227 28 108 chr2 129382108 129382231 -121305623 - L1M4c LINE L1 -5140 1998 1867 2623 120 64 12 chr2 129382231 129382466 -121305388 - MSTA LTR MaLR 0 428 162 2197 121 7 3 chr2 129382466 129382763 -121305091 - AluSx SINE Alu -14 298 1 2623 120 64 12 chr2 129382763 129382934 -121304920 - MSTA LTR MaLR -266 162 1 10053 138 43 5 chr2 129382934 129384525 -121303329 - MSTA-int LTR MaLR 0 1651 1 2731 119 44 5 chr2 129384525 129384937 -121302917 - MSTA LTR MaLR 0 428 1 1775 227 28 108 chr2 129384937 129385118 -121302736 - L1M4c LINE L1 -5269 1869 1676 898 153 0 0 chr2 129385118 129385249 -121302605 - FLAM_C SINE Alu -2 131 1 1775 227 28 108 chr2 129385249 129385366 -121302488 - L1M4c LINE L1 -5462 1676 1551 1823 191 10 3 chr2 129385367 129385665 -121302189 - AluJo SINE Alu -12 300 1 442 226 19 44 chr2 129385793 129385952 -121301902 - LTR37A LTR ERV1 -265 161 7 2451 209 30 57 chr2 129386049 129386728 -121301126 - MER31-int LTR ERV1 -735 4201 3542 2323 86 0 7 chr2 129386897 129387189 -121300665 - AluSg SINE Alu -20 290 1 2397 86 0 0 chr2 129387478 129387780 -121300074 - AluSc SINE Alu -7 302 1 1982 138 10 6 chr2 129387866 129388177 -121299677 - AluJb SINE Alu 0 312 1 314 260 10 20 chr2 129388326 129388426 -121299428 - MER31-int LTR ERV1 -3649 1287 1189 25 65 0 0 chr2 129388458 129388504 -121299350 + GC_rich Low_complexity Low_complexity 1 46 0 382 257 160 7 chr2 129388976 129389120 -121298734 - MER3 DNA MER1_type -87 122 4 3265 158 10 0 chr2 129389443 129389963 -121297891 + LTR45 LTR ERV1 1 525 0 182 276 66 40 chr2 129390232 129390308 -121297546 - L2 LINE L2 -541 2773 2696 1524 129 125 4 chr2 129390319 129390575 -121297279 + AluSx SINE Alu 1 287 -25 564 275 113 32 chr2 129391364 129391897 -121295957 - L2 LINE L2 -253 3060 2470 250 273 144 45 chr2 129392184 129392316 -121295538 - L2 LINE L2 -1415 1899 1755 294 305 48 29 chr2 129392480 129392585 -121295269 + MIR SINE MIR 85 191 -71 1967 147 42 3 chr2 129392617 129392971 -121294883 - L1MB3 LINE L1 -211 5972 5605 259 208 9 75 chr2 129392955 129393061 -121294793 + L1MC4 LINE L1 6605 6703 -1339 * 748 121 12 96 chr2 129393060 129393226 -121294628 - L1MB3 LINE L1 -564 5607 5456 369 198 135 36 chr2 129393307 129393418 -121294436 - LTR33A LTR ERVL 0 523 402 723 171 161 15 chr2 129393951 129394156 -121293698 - L1MD1 LINE L1 0 6242 6008 554 215 195 7 chr2 129396126 129396275 -121291579 + MER5B DNA MER1_type 1 177 -1 1789 149 7 21 chr2 129396769 129397050 -121290804 + AluJb SINE Alu 11 287 -25 1618 162 79 24 chr2 129397729 129398019 -121289835 + AluJb SINE Alu 1 306 -6 279 133 0 0 chr2 129400153 129400198 -121287656 + (A)n Simple_repeat Simple_repeat 1 45 0 1449 129 124 17 chr2 129400626 129400867 -121286987 + AluSx SINE Alu 1 267 -45 520 268 120 9 chr2 129402013 129402328 -121285526 - Charlie1 DNA MER1_type -5 2756 2345 346 266 161 42 chr2 129402801 129402993 -121284861 + L1ME4a LINE L1 5783 5997 -124 484 300 88 6 chr2 129403047 129403217 -121284637 - MIR SINE MIR -66 196 13 805 199 62 42 chr2 129403749 129403990 -121283864 - L1MC4 LINE L1 -8 8034 7789 2470 92 0 0 chr2 129404066 129404372 -121283482 + AluSx SINE Alu 1 306 -6 288 53 0 0 chr2 129404667 129404705 -121283149 + (TA)n Simple_repeat Simple_repeat 2 39 0 2363 86 0 3 chr2 129404705 129404995 -121282859 - AluSg SINE Alu -21 289 1 2140 128 7 3 chr2 129405037 129405343 -121282511 + AluSx SINE Alu 1 307 -5 263 306 89 38 chr2 129405395 129405552 -121282302 + MIR SINE MIR 33 197 -65 1801 154 33 20 chr2 129405672 129405971 -121281883 - AluJo SINE Alu 0 312 10 2204 112 30 0 chr2 129408004 129408307 -121279547 - AluSx SINE Alu 0 312 1 320 330 9 9 chr2 129408833 129408948 -121278906 + GA-rich Low_complexity Low_complexity 3 117 0 22 0 0 0 chr2 129410911 129410933 -121276921 + AT_rich Low_complexity Low_complexity 1 22 0 1807 137 70 0 chr2 129413498 129413782 -121274072 - AluJo SINE Alu -8 304 1 2044 155 0 0 chr2 129414022 129414331 -121273523 - AluSx SINE Alu -3 309 1 968 212 0 6 chr2 129414381 129414560 -121273294 + AluJb SINE Alu 129 306 -6 1807 151 13 20 chr2 129416414 129416713 -121271141 + AluJo SINE Alu 13 309 -3 1870 130 25 4 chr2 129416718 129417021 -121270833 + AluJb SINE Alu 1 309 0 2218 92 11 0 chr2 129418378 129418705 -121269149 + AluSx SINE Alu 1 330 0 576 314 23 42 chr2 129420271 129420532 -121267322 - MIR SINE MIR 0 262 7 374 293 32 19 chr2 129420955 129421112 -121266742 + L1ME4a LINE L1 5564 5722 -399 452 269 95 48 chr2 129421129 129421445 -121266409 + L1ME4a LINE L1 5769 6099 -22 481 294 7 7 chr2 129422130 129422273 -121265581 - MIR SINE MIR -118 144 2 2337 73 0 13 chr2 129422416 129422718 -121265136 - AluY SINE Alu -13 298 1 419 258 166 41 chr2 129423319 129423590 -121264264 + L1ME4a LINE L1 5604 5908 -213 2035 135 3 7 chr2 129423938 129424242 -121263612 + AluJo SINE Alu 4 306 -6 732 291 44 9 chr2 129424251 129424591 -121263263 + L1ME1 LINE L1 5464 5815 -1993 375 203 127 8 chr2 129424604 129424722 -121263132 + L1ME1 LINE L1 6021 6152 -14 1614 201 14 7 chr2 129424727 129425021 -121262833 + AluJb SINE Alu 1 296 -16 441 0 0 0 chr2 129425032 129425081 -121262773 + (CA)n Simple_repeat Simple_repeat 2 50 0 1165 154 0 96 chr2 129425223 129425463 -121262391 - AluJo SINE Alu -13 299 83 656 239 80 6 chr2 129426457 129426633 -121261221 - MER3 DNA MER1_type 0 209 21 229 295 77 13 chr2 129426770 129426848 -121261006 - MIR3 SINE MIR -18 190 108 1932 189 43 20 chr2 129431238 129431682 -121256172 + L1MC3 LINE L1 6992 7445 -340 261 164 55 0 chr2 129431705 129431760 -121256094 + MER66B LTR ERV1 295 352 -134 301 291 126 46 chr2 129431792 129431943 -121255911 + HAL1 LINE L1 1530 1692 -815 546 302 99 18 chr2 129432405 129432627 -121255227 + MIR SINE MIR 10 249 -13 253 80 0 100 chr2 129433205 129433255 -121254599 + Alu SINE Alu 2 46 -257 234 0 0 0 chr2 129433270 129433296 -121254558 + (CA)n Simple_repeat Simple_repeat 2 27 0 586 140 84 9 chr2 129433372 129433479 -121254375 + AluJb SINE Alu 180 294 -18 252 243 14 27 chr2 129434204 129434278 -121253576 + GA-rich Low_complexity Low_complexity 1 73 0 232 302 0 0 chr2 129434397 129434460 -121253394 + (CA)n Simple_repeat Simple_repeat 2 64 0 2328 93 0 37 chr2 129434842 129435165 -121252689 + AluSq SINE Alu 1 311 -2 1476 189 39 23 chr2 129435169 129435476 -121252378 + AluJb SINE Alu 1 312 0 378 277 155 18 chr2 129435820 129436098 -121251756 + HAL1 LINE L1 1427 1742 -765 291 312 109 27 chr2 129437121 129437525 -121250329 + L1ME4a LINE L1 5591 6027 -94 1171 133 0 28 chr2 129438802 129438983 -121248871 + FRAM SINE Alu 1 176 0 400 227 188 8 chr2 129439457 129439585 -121248269 - MIR SINE MIR -79 183 33 1826 227 132 13 chr2 129440739 129441286 -121246568 + MER90 LTR ERV1 3 614 0 657 214 32 0 chr2 129441681 129441807 -121246047 - AluJb SINE Alu -21 291 162 198 0 0 0 chr2 129441808 129441830 -121246024 + (A)n Simple_repeat Simple_repeat 1 22 0 1572 195 26 7 chr2 129441979 129442281 -121245573 + AluJb SINE Alu 1 308 -4 2277 119 0 0 chr2 129442303 129442606 -121245248 + AluSx SINE Alu 1 303 -9 838 94 0 0 chr2 129442763 129442869 -121244985 - AluY SINE Alu -16 295 190 1818 143 0 14 chr2 129442965 129443251 -121244603 - AluJb SINE Alu -30 282 1 2201 131 0 10 chr2 129443288 129443602 -121244252 + AluSq SINE Alu 1 311 -2 335 311 0 0 chr2 129443603 129443693 -121244161 + L1MC4 LINE L1 6614 6703 -1339 317 276 41 20 chr2 129443631 129443729 -121244125 - L1MC4 LINE L1 -1339 6703 6604 * 1955 151 0 0 chr2 129444002 129444326 -121243528 + AluJb SINE Alu 1 324 0 654 192 8 0 chr2 129444371 129444491 -121243363 + FRAM SINE Alu 43 163 -13 21 0 0 0 chr2 129444579 129444600 -121243254 + AT_rich Low_complexity Low_complexity 1 21 0 2916 6 0 0 chr2 129445232 129445548 -121242306 + AluYb8 SINE Alu 1 316 -2 2148 108 0 11 chr2 129445839 129446150 -121241704 - AluSq SINE Alu 0 308 1 327 276 158 8 chr2 129446403 129446557 -121241297 - MIR SINE MIR -28 180 1 387 252 98 0 chr2 129446861 129447004 -121240850 + L1ME3 LINE L1 6005 6161 -1 487 298 88 80 chr2 129447212 129447363 -121240491 - L3 LINE CR1 -42 1535 1387 1625 187 0 14 chr2 129447363 129447646 -121240208 - AluJo SINE Alu -33 279 1 487 298 88 80 chr2 129447646 129447894 -121239960 - L3 LINE CR1 -190 1387 1133 345 331 204 14 chr2 129447978 129448467 -121239387 - L3 LINE CR1 -652 925 344 2119 138 0 0 chr2 129448975 129449273 -121238581 + AluSx SINE Alu 1 298 -14 1916 142 24 7 chr2 129449723 129450018 -121237836 + AluSx SINE Alu 1 300 -12 724 279 108 21 chr2 129451240 129451480 -121236374 + MIR SINE MIR 2 262 0 28 48 0 0 chr2 129451983 129452025 -121235829 + AT_rich Low_complexity Low_complexity 1 42 0 2170 109 0 34 chr2 129452332 129452653 -121235201 + AluSx SINE Alu 1 310 -2 765 118 15 59 chr2 129452689 129452825 -121235029 + AluJo SINE Alu 7 136 -176 533 337 150 13 chr2 129452870 129453170 -121234684 + L3 LINE CR1 1210 1550 -27 2322 86 0 0 chr2 129454132 129454423 -121233431 - AluY SINE Alu -20 291 1 21 0 0 0 chr2 129454436 129454457 -121233397 + AT_rich Low_complexity Low_complexity 1 21 0 379 300 100 6 chr2 129454566 129454726 -121233128 + MIR3 SINE MIR 31 205 -3 184 184 143 0 chr2 129456584 129456633 -121231221 - L3b LINE CR1 -121 1462 1407 22 0 0 0 chr2 129458712 129458734 -121229120 + AT_rich Low_complexity Low_complexity 1 22 0 1894 128 40 0 chr2 129459694 129459967 -121227887 - AluSq SINE Alu -14 299 16 24 0 0 0 chr2 129460301 129460325 -121227529 + AT_rich Low_complexity Low_complexity 1 24 0 2447 71 0 7 chr2 129460355 129460663 -121227191 + AluY SINE Alu 1 306 -5 318 67 0 0 chr2 129461929 129461974 -121225880 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 955 98 0 0 chr2 129462136 129462259 -121225595 + AluSx SINE Alu 8 130 -183 814 104 0 0 chr2 129462258 129462380 -121225474 + AluSg/x SINE Alu 192 306 -4 * 2085 109 0 3 chr2 129463331 129463662 -121224192 + AluSq SINE Alu 1 330 0 1943 159 11 28 chr2 129464062 129464415 -121223439 - MER7A DNA MER2_type 0 346 2 1389 178 0 4 chr2 129464462 129464698 -121223156 + AluJo SINE Alu 45 279 -33 222 118 0 0 chr2 129464699 129464733 -121223121 + (GGGA)n Simple_repeat Simple_repeat 2 35 0 792 196 0 0 chr2 129464919 129465052 -121222802 - FLAM_C SINE Alu 0 133 1 2130 89 7 7 chr2 129465078 129465371 -121222483 + AluSx SINE Alu 1 293 -19 1584 159 6 52 chr2 129465764 129466090 -121221764 + AluJb SINE Alu 1 311 -1 1421 159 89 4 chr2 129466694 129466964 -121220890 - AluJb SINE Alu -19 293 1 2156 119 0 0 chr2 129466972 129467275 -121220579 - AluSx SINE Alu -9 303 1 1557 183 26 61 chr2 129467407 129467472 -121220382 + L1MB5 LINE L1 5803 5869 -305 2438 46 0 3 chr2 129467472 129467774 -121220080 + AluY SINE Alu 2 302 -9 1557 183 26 61 chr2 129467774 129468086 -121219768 + L1MB5 LINE L1 5869 6167 -7 1998 131 0 0 chr2 129468121 129468412 -121219442 - AluSx SINE Alu -21 291 1 1385 142 20 38 chr2 129468963 129469307 -121218547 + MLT1B LTR MaLR 1 382 -8 1421 158 81 0 chr2 129469376 129469635 -121218219 + AluJb SINE Alu 17 296 -16 1485 164 58 7 chr2 129470561 129470835 -121217019 - AluJo SINE Alu -24 288 1 798 136 7 36 chr2 129470935 129471075 -121216779 + AluJo SINE Alu 1 136 -176 2198 113 0 3 chr2 129471077 129471388 -121216466 + AluSx SINE Alu 1 310 -2 444 233 96 64 chr2 129472000 129472110 -121215744 - MER112 DNA MER1_type 0 260 155 1972 120 10 10 chr2 129472110 129472409 -121215445 + AluSx SINE Alu 1 299 -13 444 233 96 64 chr2 129472409 129472547 -121215307 - MER112 DNA MER1_type -105 155 4 2290 37 0 0 chr2 129472890 129473162 -121214692 - AluY SINE Alu -5 306 35 1251 181 104 0 chr2 129473505 129473764 -121214090 + AluJo SINE Alu 1 286 -26 1976 138 0 10 chr2 129473783 129474087 -121213767 - AluSx SINE Alu -11 301 1 1648 201 96 34 chr2 129474154 129474592 -121213262 + L1MD2 LINE L1 5892 6356 -3 2300 92 3 0 chr2 129474640 129474946 -121212908 + AluSp SINE Alu 1 307 -6 1647 149 0 4 chr2 129475048 129475310 -121212544 + AluSx SINE Alu 1 261 -51 1171 153 135 105 chr2 129475469 129475651 -121212203 - MER2 DNA MER2_type 0 344 146 2138 94 0 0 chr2 129475651 129475937 -121211917 + AluY SINE Alu 1 286 -25 1171 153 135 105 chr2 129475937 129476087 -121211767 - MER2 DNA MER2_type -198 146 2 229 204 0 0 chr2 129476398 129476442 -121211412 - MER5B DNA MER1_type -134 44 1 2483 186 95 110 chr2 129476494 129476523 -121211331 - Charlie1a DNA MER1_type -1311 1450 1422 2164 108 7 3 chr2 129476523 129476829 -121211025 - AluSx SINE Alu -5 307 1 2483 186 95 110 chr2 129476829 129477302 -121210552 - Charlie1a DNA MER1_type -1339 1422 966 1592 179 14 0 chr2 129477302 129477598 -121210256 - AluJb SINE Alu -6 306 7 2483 186 95 110 chr2 129477598 129478069 -121209785 - Charlie1a DNA MER1_type -1795 966 490 4279 162 43 30 chr2 129478072 129478957 -121208897 - L1MC1 LINE L1 0 6333 5438 1575 196 7 3 chr2 129478957 129479258 -121208596 - AluJo SINE Alu -10 302 1 499 222 28 94 chr2 129479265 129479324 -121208530 - L1MC1 LINE L1 -1768 4378 4317 1767 167 0 3 chr2 129479324 129479611 -121208243 + AluSx SINE Alu 1 286 -26 499 222 28 94 chr2 129479611 129479763 -121208091 - L1MC1 LINE L1 -1829 4317 4181 6725 62 7 47 chr2 129479774 129481168 -121206686 - SVA Other Other -520 1386 433 23 0 0 0 chr2 129481197 129481220 -121206634 + GC_rich Low_complexity Low_complexity 1 23 0 5128 68 27 60 chr2 129481235 129482590 -121205264 - SVA Other Other -518 868 71 2024 233 55 27 chr2 129482635 129482768 -121205086 - L1MC1 LINE L1 -2060 4086 3958 1909 130 0 3 chr2 129482768 129483060 -121204794 - AluJb SINE Alu -21 291 1 2024 233 55 27 chr2 129483060 129483523 -121204331 - L1MC1 LINE L1 -2188 3958 3473 805 178 12 18 chr2 129483535 129483698 -121204156 - FRAM SINE Alu -15 161 1 822 243 14 9 chr2 129483700 129483914 -121203940 - L1MC1 LINE L1 -2658 3488 3274 378 290 129 0 chr2 129483950 129484074 -121203780 - Charlie1a DNA MER1_type -949 506 367 778 153 8 8 chr2 129484108 129484239 -121203615 - FRAM SINE Alu -38 138 8 968 196 43 93 chr2 129484250 129484273 -121203581 - Charlie1a DNA MER1_type -2392 369 346 1322 206 118 18 chr2 129484273 129484613 -121203241 - MLT1A2 LTR MaLR 0 374 1 968 196 43 93 chr2 129484613 129484866 -121202988 - Charlie1a DNA MER1_type -2415 346 109 2299 91 0 0 chr2 129484866 129485162 -121202692 - AluSx SINE Alu -16 296 1 968 196 43 93 chr2 129485162 129485206 -121202648 - Charlie1a DNA MER1_type -2652 109 64 2017 90 3 48 chr2 129485303 129485615 -121202239 + AluSx SINE Alu 1 298 -14 2247 97 0 0 chr2 129486072 129486372 -121201482 + AluSx SINE Alu 1 300 -12 1824 155 3 3 chr2 129486384 129486687 -121201167 + AluJo SINE Alu 3 305 -7 1540 137 10 55 chr2 129486776 129487069 -121200785 + AluJb SINE Alu 1 280 -32 246 32 0 0 chr2 129487070 129487101 -121200753 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 183 114 0 0 chr2 129487104 129487139 -121200715 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 2018 135 6 3 chr2 129487141 129487452 -121200402 + AluSq SINE Alu 1 312 -1 2123 128 0 3 chr2 129487474 129487787 -121200067 + AluSx SINE Alu 1 312 0 616 194 39 16 chr2 129487801 129487930 -121199924 + FLAM_A SINE Alu 1 132 -1 2224 106 0 0 chr2 129488021 129488322 -121199532 - AluSg SINE Alu -9 301 1 994 183 0 58 chr2 129488547 129488771 -121199083 + AluJb SINE Alu 86 296 -16 1940 134 7 7 chr2 129488998 129489297 -121198557 - AluJb SINE Alu -13 299 1 637 135 24 79 chr2 129489360 129489486 -121198368 + FLAM_C SINE Alu 7 125 -18 509 240 0 0 chr2 129489850 129489954 -121197900 - MER82 DNA MER2_type -1 652 549 2087 113 0 0 chr2 129490135 129490426 -121197428 + AluSg SINE Alu 1 291 -19 254 280 240 16 chr2 129490490 129490615 -121197239 + MIR3 SINE MIR 19 171 -37 1645 167 3 7 chr2 129490653 129490940 -121196914 + AluJb SINE Alu 1 286 -26 2301 97 0 0 chr2 129491009 129491319 -121196535 + AluSx SINE Alu 1 310 -2 718 86 0 0 chr2 129491829 129491922 -121195932 - HY4 scRNA scRNA 0 93 1 941 184 26 117 chr2 129492074 129492436 -121195418 + L1M4 LINE L1 5046 5371 -797 1475 106 0 0 chr2 129492436 129492635 -121195219 + AluSq SINE Alu 1 199 -114 941 184 26 117 chr2 129492635 129492679 -121195175 + L1M4 LINE L1 5371 5417 -751 693 122 22 101 chr2 129492681 129492820 -121195034 + FRAM SINE Alu 24 151 -25 1362 182 14 84 chr2 129492825 129493194 -121194660 + L1M4 LINE L1 5417 5759 -419 2212 90 0 10 chr2 129493278 129493578 -121194276 + AluY SINE Alu 3 299 -12 1257 179 16 78 chr2 129493909 129494216 -121193638 + AluJo SINE Alu 5 292 -20 594 217 0 40 chr2 129494220 129494303 -121193551 + L1M3 LINE L1 5475 5551 -632 767 117 62 23 chr2 129494303 129494459 -121193395 + FLAM_C SINE Alu 1 133 0 594 217 0 40 chr2 129494459 129494527 -121193327 + L1M3 LINE L1 5551 5620 -563 1816 146 10 3 chr2 129494527 129494815 -121193039 + AluSx SINE Alu 1 290 -22 1962 107 46 0 chr2 129494822 129495103 -121192751 + AluSx SINE Alu 1 294 -18 1678 98 0 0 chr2 129495280 129495505 -121192349 - AluSx SINE Alu -87 225 1 365 276 124 65 chr2 129495578 129495621 -121192233 + L1MC4a LINE L1 6130 6169 -1639 1509 194 0 10 chr2 129495621 129495925 -121191929 + AluJb SINE Alu 3 303 -9 365 276 124 65 chr2 129495925 129496171 -121191683 + L1MC4a LINE L1 6169 6436 -1372 1853 128 49 0 chr2 129496221 129496509 -121191345 + AluSx SINE Alu 1 302 -10 637 231 157 22 chr2 129496509 129496738 -121191116 + L1MC4a LINE L1 6572 6831 -977 918 146 0 0 chr2 129496749 129496900 -121190954 + FRAM SINE Alu 25 175 -1 591 249 151 50 chr2 129496918 129496963 -121190891 + L1MC4 LINE L1 7601 7640 -402 2278 67 34 0 chr2 129496963 129497261 -121190593 + AluY SINE Alu 1 308 -3 591 249 151 50 chr2 129497261 129497612 -121190242 + L1MC4 LINE L1 7640 8037 -5 376 280 164 31 chr2 129497585 129497903 -121189951 + L1MC4 LINE L1 7049 7408 -634 * 1769 150 6 13 chr2 129497992 129498305 -121189549 - AluJb SINE Alu -1 311 1 378 214 51 20 chr2 129498306 129498404 -121189450 + L1MC5 LINE L1 7278 7378 -583 842 194 17 11 chr2 129498873 129499048 -121188806 + AluJb SINE Alu 120 295 -17 44 0 0 0 chr2 129499048 129499092 -121188762 + AT_rich Low_complexity Low_complexity 1 44 0 2261 91 10 0 chr2 129499122 129499430 -121188424 - AluSx SINE Alu -1 311 1 400 286 107 19 chr2 129499729 129499935 -121187919 + L1MC4 LINE L1 7802 8025 -17 2032 109 10 10 chr2 129499935 129500229 -121187625 - AluSq SINE Alu -19 294 1 828 179 0 0 chr2 129500779 129500913 -121186941 + FRAM SINE Alu 38 171 -5 337 266 29 28 chr2 129501160 129501307 -121186547 - MIR SINE MIR -65 143 20 1025 81 0 7 chr2 129501536 129501672 -121186182 + AluSq/x SINE Alu 1 135 -177 2470 49 0 7 chr2 129501672 129501980 -121185874 + AluY SINE Alu 1 306 -5 2485 62 0 0 chr2 129502352 129502659 -121185195 - AluSx SINE Alu -5 307 1 243 188 0 0 chr2 129502966 129503014 -121184840 + (TA)n Simple_repeat Simple_repeat 1 48 0 1319 204 136 9 chr2 129504596 129504935 -121182919 + L1ME3 LINE L1 5556 5937 -225 664 214 68 73 chr2 129504980 129505186 -121182668 + AluJo SINE Alu 84 288 -24 417 257 165 18 chr2 129505192 129505410 -121182444 + L1ME4a LINE L1 5615 5864 -257 1136 169 29 45 chr2 129505456 129505581 -121182273 - AluJo SINE Alu -73 239 118 1419 170 105 56 chr2 129505581 129506010 -121181844 + LTR7 LTR ERV1 1 450 0 1136 169 29 45 chr2 129506010 129506127 -121181727 - AluJo SINE Alu -194 118 1 377 262 51 51 chr2 129506543 129506757 -121181097 + L1MC5 LINE L1 7362 7575 -386 2242 95 0 3 chr2 129506813 129507118 -121180736 - AluSg1 SINE Alu -5 304 1 1940 122 3 39 chr2 129507150 129507462 -121180392 + AluSq SINE Alu 1 301 -12 236 241 0 0 chr2 129507479 129507537 -121180317 + L1MC5 LINE L1 7726 7783 -178 739 177 6 63 chr2 129507546 129507721 -121180133 + L1M4 LINE L1 8 172 -6370 1147 226 113 11 chr2 129507805 129508079 -121179775 - AluJo SINE Alu 0 302 1 596 136 0 0 chr2 129508240 129508328 -121179526 + AluJ/FLAM SINE Alu 2 89 -223 2092 113 0 10 chr2 129508528 129508828 -121179026 + AluSx SINE Alu 2 298 -14 2392 70 0 0 chr2 129508831 129509131 -121178723 + AluY SINE Alu 1 300 -11 1985 88 4 0 chr2 129509654 129509914 -121177940 + AluSx SINE Alu 1 261 -51 517 182 36 133 chr2 129510018 129510091 -121177763 + MER58C DNA MER1_type 67 117 -2303 539 211 0 84 chr2 129510091 129510233 -121177621 + FLAM_A SINE Alu 4 133 0 517 182 36 133 chr2 129510233 129510324 -121177530 + MER58C DNA MER1_type 117 215 0 321 290 68 87 chr2 129510324 129510460 -121177394 + L2 LINE L2 2578 2710 -604 1921 138 3 0 chr2 129510460 129510749 -121177105 + AluSx SINE Alu 6 295 -17 321 290 68 87 chr2 129510749 129510819 -121177035 + L2 LINE L2 2710 2780 -534 2289 199 30 108 chr2 129510974 129511638 -121176216 + LTR9 LTR ERV1 1 612 0 13130 158 44 40 chr2 129511659 129512666 -121175188 + HUERS-P3 LTR ERV1 23 1024 -7895 2274 88 3 0 chr2 129512666 129512962 -121174892 - AluSx SINE Alu -14 298 2 13130 158 44 40 chr2 129512962 129515452 -121172402 + HUERS-P3 LTR ERV1 1024 3701 -5218 5665 113 3 0 chr2 129515446 129516213 -121171641 + HUERS-P3 LTR ERV1 4863 5631 -3288 * 2064 141 0 0 chr2 129516214 129516526 -121171328 + AluSx SINE Alu 1 312 0 2131 114 0 0 chr2 129516596 129516886 -121170968 + AluSg SINE Alu 1 290 -20 1994 125 0 10 chr2 129517030 129517327 -121170527 - AluSx SINE Alu -18 294 1 2130 120 0 0 chr2 129517370 129517679 -121170175 + AluSg1 SINE Alu 1 309 0 23 33 0 0 chr2 129517685 129517715 -121170139 + AT_rich Low_complexity Low_complexity 1 30 0 2208 83 13 7 chr2 129517721 129518022 -121169832 - AluY SINE Alu -8 303 1 1484 142 1 28 chr2 129518032 129518281 -121169573 + HUERS-P3 LTR ERV1 7179 8916 -3 2012 214 31 82 chr2 129518284 129518759 -121169095 + LTR9 LTR ERV1 1 436 -176 1888 148 0 0 chr2 129518759 129519050 -121168804 - AluSx SINE Alu -15 297 7 2012 214 31 82 chr2 129519050 129519219 -121168635 + LTR9 LTR ERV1 436 612 0 2344 117 8 60 chr2 129519266 129519449 -121168405 + THE1B LTR MaLR 1 155 -209 2069 118 6 6 chr2 129519449 129519762 -121168092 + AluSq SINE Alu 1 313 0 2344 117 8 60 chr2 129519762 129519962 -121167892 + THE1B LTR MaLR 155 364 0 11434 104 6 18 chr2 129519962 129520395 -121167459 + THE1B-int LTR MaLR 1 438 -1142 2134 110 3 3 chr2 129520395 129520705 -121167149 - AluSx SINE Alu -2 310 1 2377 81 0 3 chr2 129520713 129521020 -121166834 - AluSp SINE Alu -6 307 2 11434 104 6 18 chr2 129521020 129522176 -121165678 + THE1B-int LTR MaLR 445 1579 -1 2342 130 5 16 chr2 129522177 129522545 -121165309 + THE1B LTR MaLR 1 364 0 204 326 51 51 chr2 129522600 129522673 -121165181 + L2 LINE L2 3134 3209 -63 708 87 0 39 chr2 129522673 129522776 -121165078 - HY3 scRNA scRNA -2 99 1 204 326 51 51 chr2 129522776 129522840 -121165014 + L2 LINE L2 3208 3271 -1 1677 124 101 0 chr2 129523362 129523652 -121164202 - AluSx SINE Alu 0 316 1 276 102 0 0 chr2 129523708 129523757 -121164097 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2321 128 41 0 chr2 129523806 129524149 -121163705 + LTR18A LTR ERVL 1 357 0 1990 193 8 2 chr2 129524163 129524624 -121163230 + HERVL18 LTR ERVL 9 541 -5506 1675 203 76 9 chr2 129524617 129525155 -121162699 + HERVL18 LTR ERVL 1148 1810 -4237 * 1250 125 76 2 chr2 129525154 129525411 -121162443 + HERVL18 LTR ERVL 2119 2452 -3595 * 5842 149 3 2 chr2 129525408 129526269 -121161585 + HERVL18 LTR ERVL 2718 3579 -2468 251 97 0 0 chr2 129526271 129526302 -121161552 + HERVL18 LTR ERVL 4394 4424 -1623 595 143 0 20 chr2 129526312 129526410 -121161444 + AluJo SINE Alu 40 135 -177 1258 103 191 128 chr2 129526411 129526693 -121161161 + AluSx SINE Alu 1 300 -2 465 196 43 0 chr2 129526713 129526805 -121161049 + L1MB8 LINE L1 6074 6169 -9 1828 152 14 0 chr2 129526806 129527102 -121160752 - AluSx SINE Alu -8 304 5 2062 101 0 44 chr2 129527132 129527448 -121160406 + AluSg SINE Alu 1 302 -8 420 263 28 47 chr2 129527448 129527661 -121160193 + L1MEd LINE L1 940 1148 -4971 1984 128 0 0 chr2 129527667 129527965 -121159889 + AluSx SINE Alu 1 298 -14 362 268 76 52 chr2 129528012 129528211 -121159643 + L1MEd LINE L1 1170 1378 -4751 2267 107 0 0 chr2 129528211 129528520 -121159334 - AluSg SINE Alu -1 309 1 362 268 76 52 chr2 129528520 129528570 -121159284 + L1MEd LINE L1 1378 1425 -4704 1752 155 0 16 chr2 129528571 129528874 -121158980 + AluSx SINE Alu 1 298 -14 2235 94 0 0 chr2 129528960 129529258 -121158596 + AluSx SINE Alu 1 298 -14 252 261 109 50 chr2 129529337 129529456 -121158398 + L2 LINE L2 3163 3288 -25 1489 158 8 23 chr2 129529458 129529723 -121158131 + AluJo SINE Alu 1 261 -51 22 35 0 0 chr2 129529886 129529915 -121157939 + AT_rich Low_complexity Low_complexity 1 29 0 1879 111 45 7 chr2 129529923 129530212 -121157642 + AluSx SINE Alu 2 301 -11 2002 121 3 0 chr2 129530212 129530508 -121157346 + AluSx SINE Alu 1 298 -14 1567 171 27 27 chr2 129530512 129530686 -121157168 - AluJo SINE Alu -20 292 116 585 0 0 0 chr2 129530686 129530751 -121157103 + (TG)n Simple_repeat Simple_repeat 2 66 0 1567 171 27 27 chr2 129530751 129530868 -121156986 - AluJo SINE Alu -195 117 1 1861 110 69 3 chr2 129530888 129531178 -121156676 - AluSg SINE Alu -1 309 1 2115 105 0 16 chr2 129531184 129531489 -121156365 - AluSx SINE Alu -12 300 1 640 181 78 0 chr2 129531584 129531700 -121156154 + FLAM_C SINE Alu 1 125 -8 776 167 0 15 chr2 129532057 129532189 -121155665 - FLAM_C SINE Alu -1 132 3 1245 146 44 0 chr2 129532255 129532461 -121155393 + AluSx SINE Alu 1 215 -97 2167 104 0 0 chr2 129532593 129532890 -121154964 - AluSg1 SINE Alu -10 299 3 2237 56 0 14 chr2 129532916 129533228 -121154626 - AluY SINE Alu 0 308 1 2111 109 0 3 chr2 129533235 129533529 -121154325 - AluSx SINE Alu -19 293 1 211 288 9 54 chr2 129533921 129534032 -121153822 + CT-rich Low_complexity Low_complexity 2 107 0 493 261 101 11 chr2 129534895 129534954 -121152900 - MER3 DNA MER1_type 0 209 157 2051 108 7 7 chr2 129534954 129535250 -121152604 + AluSx SINE Alu 1 296 -16 493 261 101 11 chr2 129535250 129535378 -121152476 - MER3 DNA MER1_type -52 157 5 2275 67 10 7 chr2 129535560 129535860 -121151994 + AluSq SINE Alu 1 301 -12 1476 182 34 71 chr2 129536599 129536750 -121151104 + MLT1A1 LTR MaLR 1 156 -209 1654 167 17 10 chr2 129536750 129537050 -121150804 + AluJb SINE Alu 1 302 -10 1476 182 34 71 chr2 129537050 129537277 -121150577 + MLT1A1 LTR MaLR 156 365 0 2266 96 0 0 chr2 129537571 129537873 -121149981 - AluSq SINE Alu -7 306 5 180 269 140 21 chr2 129537911 129538004 -121149850 - MIR SINE MIR -2 260 157 610 146 10 0 chr2 129538159 129538255 -121149599 + U6 snRNA snRNA 1 97 -10 2165 96 10 0 chr2 129538297 129538598 -121149256 - AluSp SINE Alu -9 304 1 461 241 82 59 chr2 129538721 129538891 -121148963 - MIR SINE MIR 0 262 89 1925 118 27 3 chr2 129538905 129539201 -121148653 + AluSx SINE Alu 10 312 0 25 0 0 0 chr2 129539566 129539591 -121148263 + AT_rich Low_complexity Low_complexity 1 25 0 1354 173 69 28 chr2 129540285 129540574 -121147280 + AluJb SINE Alu 1 301 -11 1671 121 110 0 chr2 129541331 129541459 -121146395 - AluSq SINE Alu -10 303 190 2234 71 0 0 chr2 129541459 129541739 -121146115 - AluY SINE Alu -31 280 1 1671 121 110 0 chr2 129541739 129541883 -121145971 - AluSq SINE Alu -123 190 1 374 228 0 25 chr2 129541895 129541974 -121145880 - AluS SINE Alu -231 77 1 1928 129 7 0 chr2 129541978 129542264 -121145590 - AluSc SINE Alu -21 288 1 289 231 87 58 chr2 129542462 129542635 -121145219 - L1ME3A LINE L1 -233 5937 5760 826 143 8 0 chr2 129542688 129542821 -121145033 + AluSq/x SINE Alu 1 134 -179 453 302 49 37 chr2 129542821 129543041 -121144813 - L1ME3A LINE L1 -456 5708 5486 2359 78 3 0 chr2 129543082 129543388 -121144466 + AluSp SINE Alu 1 307 -6 213 276 0 0 chr2 129543615 129543691 -121144163 + A-rich Low_complexity Low_complexity 1 76 0 1091 179 5 0 chr2 129543728 129543924 -121143930 + AluSx SINE Alu 1 197 -115 1298 181 8 8 chr2 129544505 129544753 -121143101 - AluJo SINE Alu -64 248 1 601 245 63 106 chr2 129544784 129544841 -121143013 - L1MC4 LINE L1 -1046 6996 6938 1564 173 14 20 chr2 129544841 129545136 -121142718 - AluJb SINE Alu -19 293 1 601 245 63 106 chr2 129545136 129545380 -121142474 - L1MC4 LINE L1 -1104 6938 6708 1843 141 38 0 chr2 129545419 129545710 -121142144 - AluSg SINE Alu 0 310 9 282 197 0 5 chr2 129545763 129545834 -121142020 + Alu SINE Alu 3 48 -255 1647 166 3 43 chr2 129546526 129546673 -121141181 + AluJo SINE Alu 1 152 -160 2036 139 0 0 chr2 129546673 129546983 -121140871 + AluSx SINE Alu 1 310 -2 1647 166 3 43 chr2 129546983 129547160 -121140694 + AluJo SINE Alu 152 312 0 2219 238 126 43 chr2 129547233 129547432 -121140422 + L2 LINE L2 2074 2255 -1059 1995 92 10 33 chr2 129547432 129547737 -121140117 - AluSp SINE Alu -15 298 1 2219 238 126 43 chr2 129547737 129547990 -121139864 + L2 LINE L2 2255 2486 -828 1391 141 153 16 chr2 129547990 129548239 -121139615 + AluJb SINE Alu 1 283 -19 227 31 31 0 chr2 129548242 129548274 -121139580 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2219 238 126 43 chr2 129548274 129548578 -121139276 + L2 LINE L2 2487 2898 -416 227 100 0 0 chr2 129548580 129548610 -121139244 + SATR1 Satellite Satellite 49 78 -392 1696 179 66 6 chr2 129548652 129548729 -121139125 + MER7A DNA MER2_type 2 73 -2965 2119 102 3 0 chr2 129548729 129549024 -121138830 + AluSp SINE Alu 1 296 -17 1696 179 66 6 chr2 129549024 129549265 -121138589 + MER7A DNA MER2_type 73 337 -9 * 2990 202 64 25 chr2 129549263 129549999 -121137855 + Tigger6b DNA MER2_type 152 916 -681 528 155 29 19 chr2 129549973 129550076 -121137778 + Tigger6b DNA MER2_type 1071 1174 -423 * 2112 60 0 8 chr2 129550076 129550343 -121137511 - AluY SINE Alu -46 265 1 233 266 290 28 chr2 129550400 129550686 -121137168 + L2 LINE L2 2928 3288 -25 2116 92 30 0 chr2 129550827 129551122 -121136732 + AluSc SINE Alu 1 304 -5 1839 142 0 32 chr2 129551405 129551721 -121136133 + AluSx SINE Alu 1 306 -6 439 286 40 40 chr2 129551755 129551930 -121135924 - MIR SINE MIR -17 245 71 786 136 27 68 chr2 129551940 129552087 -121135767 + FAM SINE Alu 4 144 -41 313 250 21 69 chr2 129552442 129552586 -121135268 - HAL1 LINE L1 -21 2486 2350 497 317 27 5 chr2 129552679 129552865 -121134989 - L2 LINE L2 -1293 2021 1832 477 229 52 81 chr2 129552865 129553136 -121134718 + L1MC5 LINE L1 7145 7407 -554 1339 229 42 80 chr2 129553136 129553613 -121134241 + MLT1C LTR MaLR 9 467 0 1140 200 118 48 chr2 129553614 129554054 -121133800 + L1MC5 LINE L1 7394 7864 -97 2268 88 0 3 chr2 129554070 129554376 -121133478 - AluSx SINE Alu -7 305 1 578 256 143 12 chr2 129554530 129554860 -121132994 + L1ME LINE L1 5439 5806 -356 590 165 0 10 chr2 129554873 129555113 -121132741 + AluJb SINE Alu 15 300 -12 2075 99 9 224 chr2 129555242 129555800 -121132054 + LTR21B LTR ERV1 1 438 0 313 275 111 53 chr2 129555899 129556070 -121131784 - L2 LINE L2 -1482 1832 1652 1766 126 14 7 chr2 129556242 129556520 -121131334 + AluSx SINE Alu 28 307 -5 910 192 18 0 chr2 129556524 129556691 -121131163 - MER65A LTR ERV1 -155 290 121 776 161 0 0 chr2 129556710 129556828 -121131026 - AluSq/x SINE Alu -192 120 3 728 148 15 37 chr2 129556830 129556965 -121130889 - MER65A LTR ERV1 -313 132 1 2062 115 3 0 chr2 129557044 129557330 -121130524 + AluSx SINE Alu 1 287 -25 1373 179 41 4 chr2 129557424 129557692 -121130162 - AluJo SINE Alu -10 302 25 545 237 122 98 chr2 129557951 129558065 -121129789 - MER34 LTR ERV1 0 542 432 2194 87 7 3 chr2 129558065 129558374 -121129480 - AluSx SINE Alu -1 311 2 545 237 122 98 chr2 129558374 129558635 -121129219 - MER34 LTR ERV1 -110 432 158 3723 195 61 51 chr2 129558745 129559406 -121128448 - L1MD1 LINE L1 -12 6230 5577 1589 149 85 3 chr2 129559406 129559688 -121128166 + AluJo SINE Alu 1 305 -7 2029 136 13 0 chr2 129559688 129559996 -121127858 + AluSx SINE Alu 1 312 0 3723 195 61 51 chr2 129559996 129560458 -121127396 - L1MD1 LINE L1 -664 5578 4979 1981 68 61 14 chr2 129560460 129560738 -121127116 - AluY SINE Alu -20 291 1 2111 109 0 3 chr2 129560745 129561039 -121126815 - AluSx SINE Alu -19 293 1 211 288 9 54 chr2 129561431 129561542 -121126312 + CT-rich Low_complexity Low_complexity 2 107 0 493 261 101 11 chr2 129562402 129562461 -121125393 - MER3 DNA MER1_type 0 209 157 2051 108 7 7 chr2 129562461 129562757 -121125097 + AluSx SINE Alu 1 296 -16 493 261 101 11 chr2 129562757 129562885 -121124969 - MER3 DNA MER1_type -52 157 5 2275 67 10 7 chr2 129563067 129563367 -121124487 + AluSq SINE Alu 1 301 -12 756 170 48 14 chr2 129564106 129564253 -121123601 + MLT1A1 LTR MaLR 1 152 -213 1654 167 17 10 chr2 129564257 129564557 -121123297 + AluJb SINE Alu 1 302 -10 237 224 0 0 chr2 129565002 129565060 -121122794 + (TA)n Simple_repeat Simple_repeat 1 58 0 890 119 0 0 chr2 129565060 129565186 -121122668 - FLAM_C SINE Alu -17 126 1 1203 246 43 43 chr2 129565233 129565408 -121122446 + MLT1B LTR MaLR 1 175 -221 2064 115 3 16 chr2 129565408 129565713 -121122141 + AluSg SINE Alu 1 301 -9 1203 246 43 43 chr2 129565713 129565927 -121121927 + MLT1B LTR MaLR 175 396 0 393 306 82 8 chr2 129566116 129566250 -121121604 + MIR3 SINE MIR 17 160 -48 2175 31 4 0 chr2 129566261 129566515 -121121339 + L1PA5 LINE L1 5898 6152 -2 2245 86 0 0 chr2 129566599 129566890 -121120964 + AluSg SINE Alu 1 291 -19 235 225 72 43 chr2 129567331 129567469 -121120385 + L1ME4a LINE L1 5802 5943 -178 2168 101 7 0 chr2 129567473 129567771 -121120083 + AluSx SINE Alu 6 305 -7 1689 147 20 10 chr2 129567806 129568098 -121119756 - AluJb SINE Alu -17 295 1 391 311 26 33 chr2 129568127 129568278 -121119576 + MIR SINE MIR 6 155 -107 1709 146 46 4 chr2 129568470 129568750 -121119104 + AluJo SINE Alu 2 293 -19 2286 83 3 0 chr2 129568976 129569276 -121118578 + AluSx SINE Alu 1 301 -11 1356 219 26 20 chr2 129569553 129569896 -121117958 - MLT1B LTR MaLR -45 345 1 2026 115 0 7 chr2 129570018 129570314 -121117540 + AluSc SINE Alu 1 294 -15 1019 266 98 68 chr2 129570347 129570983 -121116871 + MER21B LTR ERV1 60 714 -149 1738 130 0 96 chr2 129571201 129571546 -121116308 - AluSx SINE Alu 0 312 1 228 230 195 23 chr2 129571620 129571707 -121116147 + MIR SINE MIR 48 149 -113 1356 185 117 56 chr2 129571720 129571800 -121116054 + L1ME3A LINE L1 5736 5810 -360 833 128 0 0 chr2 129571800 129571917 -121115937 + FLAM_C SINE Alu 1 117 -16 1356 185 117 56 chr2 129571917 129572246 -121115608 + L1ME3A LINE L1 5810 6170 0 1326 172 26 69 chr2 129572252 129572381 -121115473 + AluJb SINE Alu 1 134 -178 2072 101 0 33 chr2 129572381 129572688 -121115166 - AluSx SINE Alu -15 297 1 1326 172 26 69 chr2 129572688 129572861 -121114993 + AluJb SINE Alu 134 290 -22 1551 149 36 13 chr2 129572871 129573172 -121114682 + AluSg SINE Alu 1 308 -2 260 206 271 28 chr2 129573235 129573342 -121114512 + MIR3 SINE MIR 4 136 -72 1075 60 84 30 chr2 129573903 129573943 -121113911 - L1MA3 LINE L1 0 6305 6269 2269 96 0 0 chr2 129573943 129574244 -121113610 - AluSq SINE Alu -12 301 1 1075 60 84 30 chr2 129574244 129574369 -121113485 - L1MA3 LINE L1 -36 6269 6131 1381 165 55 52 chr2 129574390 129574699 -121113155 - AluJo SINE Alu -2 310 1 1492 88 10 0 chr2 129574699 129574904 -121112950 - L1MA3 LINE L1 -317 5988 5782 1345 217 58 0 chr2 129575270 129575565 -121112289 + AluJb SINE Alu 1 312 0 2363 57 0 19 chr2 129575572 129575889 -121111965 + AluY SINE Alu 1 311 0 267 217 0 0 chr2 129576403 129576449 -121111405 + L1ME4a LINE L1 5553 5598 -523 235 200 20 0 chr2 129576556 129576606 -121111248 + L1ME4a LINE L1 5966 6016 -105 2446 68 0 3 chr2 129576624 129576934 -121110920 - AluSq SINE Alu -4 309 1 2131 84 28 0 chr2 129576944 129577228 -121110626 - AluSg SINE Alu -16 294 3 1966 119 0 0 chr2 129577377 129577675 -121110179 - AluSp SINE Alu 0 306 9 1358 187 38 25 chr2 129578092 129578188 -121109666 - Charlie5 DNA MER1_type -70 2554 2461 1502 147 35 21 chr2 129578188 129578474 -121109380 - AluJo SINE Alu -22 290 1 1358 187 38 25 chr2 129578474 129578757 -121109097 - Charlie5 DNA MER1_type -163 2461 13 1864 163 0 0 chr2 129578807 129579114 -121108740 - AluJo SINE Alu -5 307 1 1977 120 10 17 chr2 129579128 129579427 -121108427 - AluSx SINE Alu -15 297 1 478 153 12 0 chr2 129579584 129579669 -121108185 + L1PA15 LINE L1 6068 6153 -12 23 0 0 0 chr2 129579682 129579705 -121108149 + AT_rich Low_complexity Low_complexity 1 23 0 819 343 103 23 chr2 129580318 129580587 -121107267 + L1M4 LINE L1 3326 3572 -2574 977 213 6 0 chr2 129580587 129580761 -121107093 - FAM SINE Alu 0 175 1 819 343 103 23 chr2 129580761 129581091 -121106763 + L1M4 LINE L1 3572 3977 -2169 1468 158 154 0 chr2 129581091 129581183 -121106671 + AluJb SINE Alu 1 78 -224 1695 153 0 4 chr2 129581183 129581451 -121106403 + AluSx SINE Alu 33 299 -13 1468 158 154 0 chr2 129581451 129581618 -121106236 + AluJb SINE Alu 78 300 -2 2284 242 100 27 chr2 129581897 129582956 -121104898 + L1MC4 LINE L1 6484 7897 -145 841 213 6 6 chr2 129583615 129583775 -121104079 + FRAM SINE Alu 3 162 -4 2069 124 20 0 chr2 129584674 129584972 -121102882 + AluSx SINE Alu 1 304 -8 1972 117 43 7 chr2 129586172 129586471 -121101383 + AluSg SINE Alu 1 310 0 704 210 12 24 chr2 129587595 129587762 -121100092 + FRAM SINE Alu 1 165 -1 511 130 185 0 chr2 129588133 129588225 -121099629 + AluJb SINE Alu 187 295 -17 1563 154 63 7 chr2 129588386 129588672 -121099182 + Tigger3(Golem) DNA MER2_type 2728 3029 0 380 82 0 0 chr2 129588775 129588824 -121099030 - AluSc SINE Alu -8 291 243 1293 156 5 0 chr2 129588949 129589160 -121098694 - AluSx SINE Alu -100 212 1 1486 211 10 3 chr2 129589162 129589470 -121098384 - AluJo SINE Alu -2 310 1 1995 85 7 4 chr2 129590754 129591026 -121096828 + AluY SINE Alu 23 295 -16 1704 176 0 7 chr2 129591272 129591556 -121096298 - AluJb SINE Alu -25 287 6 1563 164 10 32 chr2 129591677 129591988 -121095866 - AluJo SINE Alu -8 304 1 314 219 0 0 chr2 129592165 129592229 -121095625 - MER116 DNA Mariner 0 80 17 198 265 206 20 chr2 129592452 129592554 -121095300 + MIR SINE MIR 101 221 -41 2085 129 0 3 chr2 129592643 129592946 -121094908 + AluSx SINE Alu 1 302 -10 4093 131 38 39 chr2 129593718 129594504 -121093350 - LTR1 LTR ERV1 0 785 1 2682 250 91 65 chr2 129594899 129596153 -121091701 + HAL1 LINE L1 3 1289 -1218 285 229 153 32 chr2 129596282 129596439 -121091415 + HAL1 LINE L1 1258 1433 -1074 575 270 107 28 chr2 129596449 129596701 -121091153 + L2 LINE L2 228 499 -2815 739 124 25 8 chr2 129596701 129596822 -121091032 - Charlie5 DNA MER1_type -255 2357 2235 558 192 58 0 chr2 129596820 129596940 -121090914 - Charlie5 DNA MER1_type -2485 127 1 * 1618 281 193 17 chr2 129597055 129598008 -121089846 + L2 LINE L2 698 1818 -1496 1499 71 33 0 chr2 129598121 129598374 -121089480 - LTR21B LTR ERV1 0 438 220 391 94 55 0 chr2 129598374 129598698 -121089156 - LTR21B LTR ERV1 -133 305 220 418 88 50 0 chr2 129598698 129598778 -121089076 - LTR21B LTR ERV1 -133 305 222 449 206 43 0 chr2 129598938 129599030 -121088824 + L1MB8 LINE L1 6074 6169 -9 1828 152 14 0 chr2 129599031 129599327 -121088527 - AluSx SINE Alu -8 304 5 2062 101 0 44 chr2 129599357 129599673 -121088181 + AluSg SINE Alu 1 302 -8 420 263 28 47 chr2 129599673 129599886 -121087968 + L1MEd LINE L1 940 1148 -4971 1984 128 0 0 chr2 129599892 129600190 -121087664 + AluSx SINE Alu 1 298 -14 362 268 76 52 chr2 129600237 129600436 -121087418 + L1MEd LINE L1 1170 1378 -4751 2267 107 0 0 chr2 129600436 129600745 -121087109 - AluSg SINE Alu -1 309 1 362 268 76 52 chr2 129600745 129600795 -121087059 + L1MEd LINE L1 1378 1425 -4704 1752 155 0 16 chr2 129600796 129601099 -121086755 + AluSx SINE Alu 1 298 -14 2235 94 0 0 chr2 129601185 129601483 -121086371 + AluSx SINE Alu 1 298 -14 252 261 109 50 chr2 129601562 129601681 -121086173 + L2 LINE L2 3163 3288 -25 1489 158 8 23 chr2 129601683 129601948 -121085906 + AluJo SINE Alu 1 261 -51 22 35 0 0 chr2 129602111 129602140 -121085714 + AT_rich Low_complexity Low_complexity 1 29 0 1879 111 45 7 chr2 129602148 129602437 -121085417 + AluSx SINE Alu 2 301 -11 2002 121 3 0 chr2 129602437 129602733 -121085121 + AluSx SINE Alu 1 298 -14 1586 177 17 24 chr2 129602737 129602913 -121084941 - AluJo SINE Alu -20 292 117 477 0 0 0 chr2 129602913 129602966 -121084888 + (TG)n Simple_repeat Simple_repeat 2 54 0 1586 177 17 24 chr2 129602966 129603083 -121084771 - AluJo SINE Alu -195 117 1 1861 110 69 3 chr2 129603103 129603393 -121084461 - AluSg SINE Alu -1 309 1 2115 105 0 16 chr2 129603399 129603704 -121084150 - AluSx SINE Alu -12 300 1 640 181 78 0 chr2 129603799 129603915 -121083939 + FLAM_C SINE Alu 1 125 -8 776 167 0 15 chr2 129604272 129604404 -121083450 - FLAM_C SINE Alu -1 132 3 1245 146 44 0 chr2 129604470 129604676 -121083178 + AluSx SINE Alu 1 215 -97 2249 97 0 0 chr2 129604808 129605108 -121082746 - AluSq SINE Alu -9 304 5 180 269 140 21 chr2 129605146 129605239 -121082615 - MIR SINE MIR -2 260 157 610 146 10 0 chr2 129605394 129605490 -121082364 + U6 snRNA snRNA 1 97 -10 2174 96 10 0 chr2 129605532 129605834 -121082020 - AluSp SINE Alu -8 305 1 461 241 82 59 chr2 129605957 129606127 -121081727 - MIR SINE MIR 0 262 89 1925 118 27 3 chr2 129606141 129606437 -121081417 + AluSx SINE Alu 10 312 0 25 0 0 0 chr2 129606802 129606827 -121081027 + AT_rich Low_complexity Low_complexity 1 25 0 1354 173 69 28 chr2 129607521 129607810 -121080044 + AluJb SINE Alu 1 301 -11 1671 121 110 0 chr2 129608567 129608695 -121079159 - AluSq SINE Alu -10 303 190 2234 71 0 0 chr2 129608695 129608975 -121078879 - AluY SINE Alu -31 280 1 1671 121 110 0 chr2 129608975 129609119 -121078735 - AluSq SINE Alu -123 190 1 374 228 0 25 chr2 129609131 129609210 -121078644 - AluS SINE Alu -231 77 1 1928 129 7 0 chr2 129609214 129609500 -121078354 - AluSc SINE Alu -21 288 1 289 231 87 58 chr2 129609698 129609871 -121077983 - L1ME3A LINE L1 -233 5937 5760 826 143 8 0 chr2 129609924 129610057 -121077797 + AluSq/x SINE Alu 1 134 -178 453 302 49 37 chr2 129610057 129610277 -121077577 - L1ME3A LINE L1 -456 5708 5486 2367 78 3 0 chr2 129610318 129610625 -121077229 + AluSp SINE Alu 1 308 -5 213 276 0 0 chr2 129610852 129610928 -121076926 + A-rich Low_complexity Low_complexity 1 76 0 1648 160 3 28 chr2 129610965 129611104 -121076750 + AluSx SINE Alu 1 131 -181 2149 77 17 13 chr2 129611104 129611430 -121076424 + AluSx SINE Alu 6 312 0 1648 160 3 28 chr2 129611430 129611572 -121076282 + AluSx SINE Alu 131 275 -37 207 69 0 0 chr2 129611576 129611605 -121076249 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 824 135 0 40 chr2 129611614 129611740 -121076114 + FLAM_C SINE Alu 1 121 -12 628 113 173 0 chr2 129611763 129611896 -121075958 + L1MA4A LINE L1 6129 6284 -19 207 0 0 0 chr2 129611896 129611919 -121075935 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 680 166 0 83 chr2 129611920 129611955 -121075899 + AluJo/FLAM SINE Alu 1 37 -265 1873 136 7 7 chr2 129611955 129612249 -121075605 - AluSx SINE Alu -18 294 1 680 166 0 83 chr2 129612249 129612358 -121075496 + AluJo/FLAM SINE Alu 37 133 -169 1354 191 11 11 chr2 129612437 129612704 -121075150 - AluJb SINE Alu -45 267 1 1304 169 64 4 chr2 129612722 129612971 -121074883 - AluSx SINE Alu -48 264 1 1821 153 61 0 chr2 129613393 129613719 -121074135 - L1PA15 LINE L1 -4 6161 5816 958 174 43 34 chr2 129613720 129613927 -121073927 - AluJb SINE Alu -19 293 85 30 0 0 0 chr2 129614855 129614885 -121072969 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr2 129615162 129615182 -121072672 + (A)n Simple_repeat Simple_repeat 1 20 0 2354 92 13 3 chr2 129615275 129615579 -121072275 + AluSq SINE Alu 1 307 -6 240 111 0 0 chr2 129615948 129615984 -121071870 + (CA)n Simple_repeat Simple_repeat 1 36 0 1839 168 0 29 chr2 129616160 129616470 -121071384 + AluJb SINE Alu 1 301 -11 2140 117 16 7 chr2 129616470 129616778 -121071076 + AluSx SINE Alu 1 311 -1 22 56 0 0 chr2 129616837 129616873 -121070981 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr2 129616893 129616917 -121070937 + AT_rich Low_complexity Low_complexity 1 24 0 2084 122 0 0 chr2 129616922 129617208 -121070646 + AluSx SINE Alu 9 294 -18 1212 185 18 40 chr2 129617253 129617480 -121070374 + AluJb SINE Alu 63 284 -28 1847 149 68 47 chr2 129617530 129617959 -121069895 + MER67A LTR ERV1 106 543 0 223 143 36 36 chr2 129618242 129618298 -121069556 + (CCG)n Simple_repeat Simple_repeat 1 56 0 326 216 70 64 chr2 129618722 129618746 -121069108 + HAL1 LINE L1 2007 2029 -478 2460 72 0 25 chr2 129618746 129619066 -121068788 + AluSx SINE Alu 1 312 0 326 216 70 64 chr2 129619066 129619212 -121068642 + HAL1 LINE L1 2029 2178 -329 1834 106 77 0 chr2 129619217 129619491 -121068363 + AluJo SINE Alu 2 296 -16 1644 83 83 93 chr2 129619499 129619812 -121068042 + AluSq SINE Alu 3 312 -1 326 22 43 0 chr2 129623025 129623071 -121064783 + (TAAAA)n Simple_repeat Simple_repeat 5 52 0 21 0 0 0 chr2 129623752 129623773 -121064081 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 129626147 129626173 -121061681 + AT_rich Low_complexity Low_complexity 1 26 0 237 235 12 62 chr2 129626247 129626328 -121061526 - MIR SINE MIR -78 184 108 586 254 78 19 chr2 129626381 129626586 -121061268 - MIR SINE MIR -6 256 40 1909 172 3 0 chr2 129627624 129627921 -121059933 + AluJb SINE Alu 1 298 -14 212 0 0 35 chr2 129627948 129627977 -121059877 + (GGAA)n Simple_repeat Simple_repeat 4 31 0 1612 163 28 10 chr2 129628038 129628326 -121059528 - AluJb SINE Alu -19 293 1 2357 102 0 0 chr2 129628889 129629182 -121058672 - AluSc SINE Alu -16 293 1 2070 112 51 3 chr2 129630075 129630194 -121057660 + AluSq SINE Alu 1 113 -200 2395 89 3 0 chr2 129630194 129630486 -121057368 + AluSc SINE Alu 1 293 -16 2070 112 51 3 chr2 129630486 129630660 -121057194 + AluSq SINE Alu 113 308 -5 24 32 0 0 chr2 129632035 129632066 -121055788 + AT_rich Low_complexity Low_complexity 1 31 0 2275 115 10 13 chr2 129632066 129632380 -121055474 + AluSq SINE Alu 1 313 0 803 95 8 71 chr2 129632380 129632506 -121055348 - AluJo/FLAM SINE Alu -184 118 1 218 203 58 43 chr2 129634824 129634893 -121052961 - L3b LINE CR1 -113 1470 1401 187 261 91 0 chr2 129635002 129635090 -121052764 - L3b LINE CR1 -381 1202 1107 206 255 20 0 chr2 129635524 129635575 -121052279 + GA-rich Low_complexity Low_complexity 1 52 0 205 161 0 0 chr2 129635911 129635942 -121051912 + polypyrimidine Low_complexity Low_complexity 4 34 0 1242 196 14 33 chr2 129635942 129636218 -121051636 - AluJo SINE Alu -2 310 40 2047 149 0 3 chr2 129636224 129636526 -121051328 + AluJo SINE Alu 1 301 -11 243 254 45 0 chr2 129636558 129636625 -121051229 - FRAM/FAM SINE Alu -105 61 1 549 179 71 50 chr2 129636796 129636893 -121050961 + MIR SINE MIR 104 197 -65 2153 119 3 0 chr2 129636893 129637178 -121050676 + AluSp SINE Alu 1 286 -27 324 70 0 0 chr2 129637178 129637221 -121050633 + (TA)n Simple_repeat Simple_repeat 1 43 0 549 179 71 50 chr2 129637221 129637262 -121050592 + MIR SINE MIR 196 246 -16 2229 128 0 0 chr2 129637494 129637791 -121050063 - AluSx SINE Alu -13 299 3 23 0 0 0 chr2 129637906 129637929 -121049925 + AT_rich Low_complexity Low_complexity 1 23 0 1863 130 14 21 chr2 129637932 129638240 -121049614 + AluJo SINE Alu 1 306 0 260 188 43 116 chr2 129639090 129639228 -121048626 - L1MC5 LINE L1 -51 7910 7783 2265 159 40 21 chr2 129639311 129639731 -121048123 + MSTA LTR MaLR 1 428 0 186 273 124 50 chr2 129639835 129639956 -121047898 - L3 LINE CR1 -35 1542 1413 828 162 14 7 chr2 129640179 129640321 -121047533 + BC200 scRNA scRNA 2 144 -56 234 0 0 0 chr2 129640931 129640957 -121046897 + (CA)n Simple_repeat Simple_repeat 2 27 0 235 309 52 52 chr2 129641635 129641732 -121046122 + MIR SINE MIR 21 117 -145 1572 183 10 36 chr2 129642751 129643057 -121044797 - AluJo SINE Alu -12 300 3 747 175 0 29 chr2 129643064 129643201 -121044653 - FLAM_A SINE Alu 0 133 1 2423 80 3 3 chr2 129643252 129643552 -121044302 - AluSc SINE Alu -9 300 1 316 318 104 26 chr2 129643587 129643741 -121044113 + MIR SINE MIR 20 185 -77 27 29 0 0 chr2 129645555 129645589 -121042265 + GC_rich Low_complexity Low_complexity 1 34 0 24 53 0 0 chr2 129645698 129645736 -121042118 + GC_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr2 129645851 129645876 -121041978 + GC_rich Low_complexity Low_complexity 1 25 0 212 0 36 0 chr2 129646146 129646174 -121041680 + (CGG)n Simple_repeat Simple_repeat 3 31 0 194 62 31 0 chr2 129646767 129646799 -121041055 + (CCTCG)n Simple_repeat Simple_repeat 1 33 0 2567 49 13 13 chr2 129648656 129648964 -121038890 + AluSp SINE Alu 1 308 -5 615 236 123 36 chr2 129648971 129649191 -121038663 + MIR SINE MIR 12 250 -12 1804 153 25 48 chr2 129649665 129649979 -121037875 - AluJo SINE Alu -5 307 1 1310 110 186 124 chr2 129650158 129650448 -121037406 - AluSx SINE Alu -4 308 1 605 143 0 20 chr2 129650449 129650547 -121037307 - AluJo SINE Alu -177 135 40 5483 149 5 2 chr2 129650590 129651450 -121036404 - HERVL18 LTR ERVL -2468 3579 2718 1172 125 76 2 chr2 129651447 129651704 -121036150 - HERVL18 LTR ERVL -3595 2452 2119 * 1572 187 8 10 chr2 129651703 129652241 -121035613 - HERVL18 LTR ERVL -4237 1810 1148 * 1868 193 8 2 chr2 129652234 129652695 -121035159 - HERVL18 LTR ERVL -5506 541 9 2358 128 41 0 chr2 129652709 129653052 -121034802 - LTR18A LTR ERVL 0 357 1 267 104 0 0 chr2 129653101 129653149 -121034705 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 1806 124 101 0 chr2 129653205 129653495 -121034359 + AluSx SINE Alu 1 316 0 191 333 45 64 chr2 129654017 129654081 -121033773 - L2 LINE L2 -1 3271 3207 711 87 0 39 chr2 129654081 129654184 -121033670 + HY3 scRNA scRNA 1 99 -2 191 333 45 64 chr2 129654184 129654275 -121033579 - L2 LINE L2 -65 3207 3119 2366 130 5 16 chr2 129654312 129654680 -121033174 - THE1B LTR MaLR 0 364 1 11545 104 6 18 chr2 129654681 129655837 -121032017 - THE1B-int LTR MaLR -1 1579 410 2544 78 0 3 chr2 129655837 129656144 -121031710 + AluSp SINE Alu 2 307 -6 2286 110 3 3 chr2 129656152 129656462 -121031392 + AluSx SINE Alu 1 310 -2 11545 104 6 18 chr2 129656462 129656895 -121030959 - THE1B-int LTR MaLR -1177 403 1 2393 118 8 50 chr2 129656895 129657091 -121030763 - THE1B LTR MaLR 0 364 190 2222 110 6 19 chr2 129657091 129657408 -121030446 - AluSq SINE Alu 0 313 1 2393 118 8 50 chr2 129657408 129657591 -121030263 - THE1B LTR MaLR -174 190 1 2082 214 31 82 chr2 129657638 129657807 -121030047 - LTR9 LTR ERV1 0 612 436 2032 148 0 0 chr2 129657807 129658098 -121029756 + AluSx SINE Alu 7 297 -15 2082 214 31 82 chr2 129658098 129658573 -121029281 - LTR9 LTR ERV1 -176 436 1 1399 142 1 28 chr2 129658576 129658825 -121029029 - HUERS-P3 LTR ERV1 -3 8916 7179 2401 92 3 0 chr2 129658835 129659138 -121028716 + AluY SINE Alu 1 304 -7 1308 245 6 57 chr2 129659251 129659701 -121028153 - L1ME3 LINE L1 -1 6161 5732 2264 111 3 0 chr2 129659854 129660152 -121027702 + AluSx SINE Alu 1 299 -13 915 157 0 0 chr2 129660159 129660299 -121027555 + FLAM_C SINE Alu 1 140 -3 593 308 31 18 chr2 129660348 129660572 -121027282 + ERVL LTR ERVL 2644 2870 -2894 591 275 110 69 chr2 129660586 129661033 -121026821 - LTR33A LTR ERVL 0 523 59 2255 87 35 0 chr2 129661492 129661781 -121026073 + AluSx SINE Alu 5 303 -9 288 346 62 8 chr2 129662643 129662773 -121025081 + L2 LINE L2 3121 3257 -15 2334 125 0 3 chr2 129662808 129663121 -121024733 - AluSx SINE Alu 0 312 1 658 139 98 8 chr2 129663126 129663248 -121024606 - AluSq/x SINE Alu -179 134 2 246 214 0 18 chr2 129663249 129663305 -121024549 - L1M4 LINE L1 -1843 4303 4249 2131 89 0 24 chr2 129663406 129663699 -121024155 + AluSc SINE Alu 22 307 -2 240 35 0 0 chr2 129663702 129663731 -121024123 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 5902 104 8 84 chr2 129663877 129664000 -121023854 - Tigger1 DNA MER2_type 0 2418 2287 1860 178 0 0 chr2 129664000 129664292 -121023562 + AluJo SINE Alu 1 292 -20 5902 104 8 84 chr2 129664292 129664776 -121023078 - Tigger1 DNA MER2_type -131 2287 1768 1650 161 0 4 chr2 129664776 129665025 -121022829 + AluJo SINE Alu 1 248 -64 5902 104 8 84 chr2 129665025 129665094 -121022760 - Tigger1 DNA MER2_type -650 1768 1695 2053 141 0 10 chr2 129665094 129665406 -121022448 - AluJb SINE Alu -2 310 2 5902 104 8 84 chr2 129665406 129665426 -121022428 - Tigger1 DNA MER2_type -723 1695 1675 2370 98 0 9 chr2 129665426 129665741 -121022113 - AluSx SINE Alu 0 312 1 5902 104 8 84 chr2 129665741 129666114 -121021740 - Tigger1 DNA MER2_type -743 1675 1428 1908 150 0 13 chr2 129666114 129666421 -121021433 + AluJb SINE Alu 1 303 -9 2257 94 7 26 chr2 129666421 129666730 -121021124 + AluSq SINE Alu 1 303 -10 6614 116 36 30 chr2 129666732 129667309 -121020545 - Tigger1 DNA MER2_type -1336 1082 493 2625 61 0 0 chr2 129667309 129667620 -121020234 - AluY SINE Alu 0 311 1 6614 116 36 30 chr2 129667620 129668114 -121019740 - Tigger1 DNA MER2_type -1925 493 4 1173 160 0 5 chr2 129668202 129668390 -121019464 - AluJo SINE Alu -33 279 93 2256 105 0 3 chr2 129668603 129668897 -121018957 + AluSg SINE Alu 1 293 -17 215 269 92 34 chr2 129669006 129669125 -121018729 - MIR3 SINE MIR -39 169 44 2290 88 14 7 chr2 129669250 129669545 -121018309 - AluSq SINE Alu -16 297 1 1978 137 14 3 chr2 129669919 129670211 -121017643 - AluSc SINE Alu -14 295 1 566 27 0 53 chr2 129670211 129670286 -121017568 - AluSc SINE Alu -176 133 63 1417 100 10 25 chr2 129670286 129670486 -121017368 - AluSx SINE Alu -115 197 1 609 190 18 74 chr2 129670486 129670962 -121016892 - LTR57-int LTR ERVL -3955 1388 1235 533 163 43 57 chr2 129670565 129670596 -121017258 - LTR49-int LTR ERV1 -3524 1412 1382 * 1788 156 0 21 chr2 129670596 129670911 -121016943 - AluJb SINE Alu 0 309 1 533 163 43 57 chr2 129670911 129671019 -121016835 - LTR49-int LTR ERV1 -3554 1382 1274 2034 124 37 10 chr2 129671059 129671358 -121016496 - AluSx SINE Alu -5 307 1 1039 274 29 35 chr2 129671529 129671804 -121016050 - LTR49-int LTR ERV1 -2625 1566 1292 1844 175 10 0 chr2 129671804 129672096 -121015758 - AluJb SINE Alu -17 295 1 1039 274 29 35 chr2 129672096 129672134 -121015720 - LTR49-int LTR ERV1 -2899 1292 1255 304 285 57 41 chr2 129672178 129672301 -121015553 - MER34C LTR ERV1 -143 442 318 1620 58 63 10 chr2 129672314 129672520 -121015334 - AluY SINE Alu -9 302 86 417 211 8 84 chr2 129672531 129672692 -121015162 - LTR49-int LTR ERV1 -3673 2658 841 1888 163 30 0 chr2 129672896 129673191 -121014663 - AluJo SINE Alu -8 304 1 1123 121 0 0 chr2 129673280 129673437 -121014417 - AluSg/x SINE Alu -21 289 133 1123 149 11 0 chr2 129673508 129673682 -121014172 - AluJb SINE Alu 0 312 137 2291 114 3 0 chr2 129673693 129674001 -121013853 - AluSx SINE Alu -1 311 3 2289 113 6 0 chr2 129674164 129674475 -121013379 + AluSq SINE Alu 1 313 0 824 164 26 7 chr2 129674607 129674759 -121013095 + FRAM SINE Alu 20 174 -2 1752 166 13 7 chr2 129674765 129675073 -121012781 + AluJb SINE Alu 1 310 -2 1791 163 0 23 chr2 129675200 129675506 -121012348 + AluJb SINE Alu 2 300 -12 3095 87 7 28 chr2 129675863 129675901 -121011953 - MSTA LTR MaLR 0 428 391 1985 134 7 16 chr2 129675901 129676207 -121011647 + AluSx SINE Alu 1 303 -9 3095 87 7 28 chr2 129676207 129676605 -121011249 - MSTA LTR MaLR -37 391 1 507 250 148 20 chr2 129676611 129676807 -121011047 - LTR49-int LTR ERV1 -4184 2147 1927 1958 168 127 30 chr2 129676832 129677017 -121010837 - LTR54 LTR ERV1 0 510 344 2394 74 0 0 chr2 129677017 129677315 -121010539 + AluY SINE Alu 1 298 -13 1958 168 127 30 chr2 129677315 129677593 -121010261 - LTR54 LTR ERV1 -166 344 2 983 229 43 10 chr2 129677593 129677895 -121009959 + L1MB4 LINE L1 2110 2421 -3963 1706 167 14 10 chr2 129677902 129678195 -121009659 + AluJb SINE Alu 1 294 -18 1362 152 93 4 chr2 129678211 129678480 -121009374 + L1MA4 LINE L1 6008 6300 0 2108 94 25 0 chr2 129678506 129678783 -121009071 + AluSq SINE Alu 11 294 -19 2874 216 69 82 chr2 129678785 129678819 -121009035 + L1MB4 LINE L1 2419 2452 -3930 2276 101 7 0 chr2 129678819 129679116 -121008738 + AluSx SINE Alu 1 299 -13 2874 216 69 82 chr2 129679116 129679651 -121008203 + L1MB4 LINE L1 2452 2993 -3389 2032 135 10 0 chr2 129679651 129679940 -121007914 + AluSx SINE Alu 1 292 -20 2874 216 69 82 chr2 129679940 129680645 -121007209 + L1MB4 LINE L1 2993 3677 -2705 463 285 21 14 chr2 129681497 129681641 -121006213 + L1PB4 LINE L1 6012 6156 0 2200 98 35 0 chr2 129681676 129681962 -121005892 + AluSq SINE Alu 1 296 -17 198 0 0 0 chr2 129682035 129682057 -121005797 + (A)n Simple_repeat Simple_repeat 1 22 0 782 194 121 0 chr2 129682058 129682223 -121005631 + AluJo SINE Alu 2 186 -126 1879 129 50 0 chr2 129682528 129682830 -121005024 + Tigger3(Golem) DNA MER2_type 1 317 -2712 2116 105 4 4 chr2 129682837 129683114 -121004740 - AluJb SINE Alu -24 288 12 2727 124 81 5 chr2 129683126 129683560 -121004294 + Tigger3(Golem) DNA MER2_type 2562 3028 -1 2496 213 50 106 chr2 129683560 129684242 -121003612 + L1MB4 LINE L1 3694 4412 -1970 2063 113 7 0 chr2 129684242 129684516 -121003338 - AluSx SINE Alu -36 276 1 2496 213 50 106 chr2 129684516 129684793 -121003061 + L1MB4 LINE L1 4412 4595 -1787 2205 124 0 13 chr2 129684793 129685099 -121002755 - AluSx SINE Alu -10 302 1 2496 213 50 106 chr2 129685099 129685159 -121002695 + L1MB4 LINE L1 4595 4657 -1725 1919 150 4 0 chr2 129685168 129685488 -121002366 + AluJb SINE Alu 1 321 0 1878 216 64 26 chr2 129685489 129686048 -121001806 + L1MB4 LINE L1 5781 6389 -18 418 202 0 0 chr2 129686072 129686156 -121001698 + L1MB8 LINE L1 6093 6176 -2 667 172 90 0 chr2 129686315 129686437 -121001417 + FLAM_C SINE Alu 1 133 0 2525 227 73 47 chr2 129686442 129687076 -121000778 + L1ME2 LINE L1 4316 4932 -1232 2024 159 3 0 chr2 129687076 129687384 -121000470 + AluJb SINE Alu 1 309 -3 2525 227 73 47 chr2 129687384 129687611 -121000243 + L1ME2 LINE L1 4932 5151 -1013 1836 139 26 32 chr2 129687611 129687920 -120999934 + AluJb SINE Alu 1 307 -5 2525 227 73 47 chr2 129687920 129688662 -120999192 + L1ME2 LINE L1 5151 6100 -64 1839 178 14 0 chr2 129689036 129689329 -120998525 + AluJb SINE Alu 1 297 -15 763 158 0 0 chr2 129689381 129689495 -120998359 - FLAM_C SINE Alu -18 125 12 2177 118 0 3 chr2 129689518 129689815 -120998039 - AluSx SINE Alu -16 296 1 1120 176 0 34 chr2 129689983 129690216 -120997638 + AluJo SINE Alu 85 310 0 2290 89 3 0 chr2 129692617 129692935 -120994919 + AluSp SINE Alu 1 313 0 756 180 8 0 chr2 129693180 129693301 -120994553 - LTR53 LTR ERVL -8 511 390 3679 134 37 36 chr2 129693301 129693941 -120993913 - Tigger3(Golem) DNA MER2_type 0 3028 2385 1559 190 16 23 chr2 129693941 129694246 -120993608 - AluJo SINE Alu -9 303 1 3679 134 37 36 chr2 129694246 129694305 -120993549 - Tigger3(Golem) DNA MER2_type -643 2385 2328 1216 159 0 67 chr2 129694308 129694344 -120993510 + AluJo SINE Alu 86 123 -189 2144 103 10 3 chr2 129694344 129694636 -120993218 - AluSg SINE Alu -16 294 1 1216 159 0 67 chr2 129694636 129694838 -120993016 + AluJo SINE Alu 123 308 -4 1069 192 24 71 chr2 129694883 129695138 -120992716 - LTR53 LTR ERVL -276 243 1 1877 179 0 0 chr2 129695566 129695863 -120991991 - AluJo SINE Alu -15 297 1 955 262 42 64 chr2 129695889 129696298 -120991556 + L1M4b LINE L1 543 942 -5917 428 195 49 8 chr2 129696298 129696421 -120991433 - L1MDa LINE L1 -2144 4396 4269 442 243 126 23 chr2 129696426 129696518 -120991336 + MLT1C LTR MaLR 1 82 -385 2344 84 0 3 chr2 129696518 129696814 -120991040 + AluSx SINE Alu 8 302 -10 442 243 126 23 chr2 129696814 129696935 -120990919 + MLT1C LTR MaLR 82 236 -231 * 1114 229 52 22 chr2 129696924 129697234 -120990620 + MLT1C LTR MaLR 180 465 -2 927 217 107 8 chr2 129697240 129697493 -120990361 - L1MDa LINE L1 -2276 4264 3987 915 222 55 52 chr2 129697532 129697665 -120990189 - L1MDa LINE L1 -3734 2845 2714 390 21 0 0 chr2 129697665 129697712 -120990142 + (TG)n Simple_repeat Simple_repeat 2 48 0 2055 135 0 10 chr2 129697712 129698000 -120989854 - AluSx SINE Alu -27 285 1 915 222 55 52 chr2 129698000 129698239 -120989615 - L1MDa LINE L1 -3865 2714 2425 2315 93 0 26 chr2 129698239 129698552 -120989302 - AluSx SINE Alu -7 305 1 915 222 55 52 chr2 129698552 129698587 -120989267 - L1MDa LINE L1 -4154 2425 2392 241 128 64 0 chr2 129700422 129700469 -120987385 - MIR SINE MIR -7 255 206 865 321 77 11 chr2 129700470 129700906 -120986948 + MLT1J LTR MaLR 1 568 -47 427 229 165 35 chr2 129700944 129701114 -120986740 - MIR SINE MIR -64 198 7 4829 275 91 24 chr2 129701250 129702085 -120985769 + L2 LINE L2 760 1538 -1775 2200 108 24 0 chr2 129702085 129702381 -120985473 + AluSq SINE Alu 1 303 -10 4829 275 91 24 chr2 129702381 129703786 -120984068 + L2 LINE L2 1538 3168 -145 201 74 0 0 chr2 129703786 129703813 -120984041 + (CATA)n Simple_repeat Simple_repeat 2 28 0 4829 275 91 24 chr2 129703813 129703929 -120983925 + L2 LINE L2 3168 3275 -38 22 0 0 0 chr2 129704345 129704367 -120983487 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr2 129705383 129705411 -120982443 + AT_rich Low_complexity Low_complexity 1 28 0 1981 139 0 3 chr2 129705411 129705698 -120982156 - AluJb SINE Alu -26 286 1 2581 151 87 82 chr2 129705984 129706379 -120981475 + MER21B LTR ERV1 227 628 -235 2039 49 4 0 chr2 129706379 129706626 -120981228 + L1PA5 LINE L1 5907 6154 0 2581 151 87 82 chr2 129706626 129706861 -120980993 + MER21B LTR ERV1 628 860 -3 1399 181 22 37 chr2 129706931 129707202 -120980652 + AluJo SINE Alu 5 271 -41 1649 176 14 14 chr2 129707303 129707599 -120980255 + AluJo SINE Alu 1 296 -16 758 267 67 35 chr2 129707688 129707954 -120979900 + HAL1 LINE L1 1105 1361 -1146 719 34 34 0 chr2 129707954 129708043 -120979811 + L1PA8 LINE L1 6075 6166 -6 2251 91 0 3 chr2 129708043 129708330 -120979524 + AluSg SINE Alu 1 286 -24 758 267 67 35 chr2 129708330 129708497 -120979357 + HAL1 LINE L1 1360 1553 -954 470 31 0 15 chr2 129708531 129708596 -120979258 + (GA)n Simple_repeat Simple_repeat 1 64 0 1384 203 46 0 chr2 129708599 129708860 -120978994 - AluJb SINE Alu -39 273 1 256 238 48 0 chr2 129708865 129708928 -120978926 + HAL1 LINE L1 1557 1622 -885 * 2059 233 89 29 chr2 129708919 129709811 -120978043 + L1MDa LINE L1 9 1347 -5193 900 149 13 13 chr2 129709811 129709965 -120977889 - FAM SINE Alu -19 156 3 323 243 0 0 chr2 129709968 129710042 -120977812 + L1MDa LINE L1 1396 1469 -5074 * 978 273 82 18 chr2 129710038 129710427 -120977427 + HAL1 LINE L1 1613 2026 -481 332 275 54 18 chr2 129710659 129710826 -120977028 - MER104 DNA MER2_type -4 176 4 1929 130 9 47 chr2 129710892 129711214 -120976640 - AluJb SINE Alu -2 310 1 912 124 0 29 chr2 129711221 129711358 -120976496 - FLAM_C SINE Alu 0 133 1 759 307 85 9 chr2 129711914 129712233 -120975621 - L1MC/D LINE L1 -2127 5681 5339 4894 32 0 0 chr2 129712233 129712799 -120975055 + L1PA4 LINE L1 5587 6152 -3 311 301 20 54 chr2 129712941 129713144 -120974710 - L1MC/D LINE L1 -817 5329 5134 1740 181 0 3 chr2 129713157 129713439 -120974415 - AluJb SINE Alu -31 281 1 1730 125 24 35 chr2 129713496 129713783 -120974071 + THE1B LTR MaLR 1 284 -80 787 209 19 6 chr2 129713958 129714116 -120973738 + FRAM SINE Alu 1 159 -17 2499 91 0 0 chr2 129714120 129714427 -120973427 + AluSq SINE Alu 1 307 -6 223 229 33 0 chr2 129714539 129714600 -120973254 + A-rich Low_complexity Low_complexity 2 64 0 2263 98 3 7 chr2 129714624 129714921 -120972933 + AluSx SINE Alu 1 296 -16 2326 104 0 7 chr2 129714923 129715230 -120972624 + AluSc SINE Alu 1 305 -4 729 186 0 36 chr2 129715251 129715391 -120972463 + AluJb SINE Alu 160 294 -18 2118 141 7 0 chr2 129715421 129715725 -120972129 + AluSx SINE Alu 5 310 -2 2298 99 0 13 chr2 129715970 129716284 -120971570 + AluSg SINE Alu 1 310 0 2328 107 0 0 chr2 129716330 129716630 -120971224 + AluSq SINE Alu 1 300 -13 502 126 11 0 chr2 129716780 129716867 -120970987 - L1M4c LINE L1 -4191 2193 2106 335 236 118 0 chr2 129716865 129717009 -120970845 + L1M4 LINE L1 2272 2432 -3714 * 743 207 35 12 chr2 129717020 129717189 -120970665 + L1MB1 LINE L1 5996 6168 0 1054 259 28 40 chr2 129717190 129717311 -120970543 + L1M4 LINE L1 2426 2547 -3599 2054 116 3 0 chr2 129717311 129717605 -120970249 - AluSg1 SINE Alu -14 295 1 1054 259 28 40 chr2 129717605 129717908 -120969946 + L1M4 LINE L1 2547 2845 -3301 349 238 30 20 chr2 129717911 129718012 -120969842 + MER63 DNA MER1_type 488 589 -472 2007 124 0 7 chr2 129718019 129718318 -120969536 - AluSq SINE Alu -14 299 3 216 0 0 0 chr2 129718324 129718348 -120969506 + (T)n Simple_repeat Simple_repeat 1 24 0 638 90 0 0 chr2 129718362 129718451 -120969403 + AluSp/q SINE Alu 208 296 -17 1623 126 48 7 chr2 129718451 129718721 -120969133 - AluSx SINE Alu -31 281 1 317 115 66 33 chr2 129718722 129718783 -120969071 + MER63 DNA MER1_type 594 656 -405 273 276 29 48 chr2 129718845 129718950 -120968904 + MER58B DNA MER1_type 239 341 0 603 276 178 34 chr2 129718952 129719307 -120968547 + MER63 DNA MER1_type 652 1057 -4 1530 165 86 7 chr2 129719430 129719721 -120968133 - MLT1C LTR MaLR 0 467 154 1092 165 88 98 chr2 129719722 129719857 -120967997 + AluJo SINE Alu 1 136 -174 2190 85 17 0 chr2 129719857 129720150 -120967704 + AluSc SINE Alu 1 298 -11 1092 165 88 98 chr2 129720150 129720170 -120967684 + AluJo SINE Alu 136 155 -155 2224 101 0 7 chr2 129720170 129720476 -120967378 + AluSc SINE Alu 1 304 -5 1092 165 88 98 chr2 129720476 129720632 -120967222 + AluJo SINE Alu 155 310 0 870 151 110 0 chr2 129720633 129720779 -120967075 - MLT1C LTR MaLR -305 162 1 1483 235 0 7 chr2 129720859 129721161 -120966693 - AluJb SINE Alu -1 301 2 227 164 0 15 chr2 129771888 129771955 -120915899 + CT-rich Low_complexity Low_complexity 4 69 0 680 263 23 27 chr2 129771974 129772233 -120915621 + L1MB7 LINE L1 5927 6184 0 938 175 2 2 chr2 129772852 129774194 -120913660 + ALR/Alpha Satellite centromeric 1 1342 0 237 33 0 0 chr2 129775861 129775891 -120911963 + (CA)n Simple_repeat Simple_repeat 2 31 0 249 294 34 8 chr2 129777994 129778113 -120909741 + L2 LINE L2 2937 3058 -214 358 274 79 30 chr2 129779298 129779462 -120908392 - L1ME LINE L1 -426 5695 5524 1812 144 0 17 chr2 129779507 129779799 -120908055 - AluSx SINE Alu -20 292 6 223 382 47 29 chr2 129780168 129780338 -120907516 - MIR SINE MIR -50 212 40 242 272 87 11 chr2 129782539 129782631 -120905223 + MIR SINE MIR 107 205 -57 287 272 272 0 chr2 129783464 129783589 -120904265 + MIR SINE MIR 2 160 -102 324 338 59 10 chr2 129784833 129785037 -120902817 - L1ME LINE L1 -690 5474 5261 374 206 98 33 chr2 129786471 129786563 -120901291 - MIR SINE MIR -119 143 46 2215 216 47 2 chr2 129788326 129788811 -120899043 - MLT2B2 LTR ERVL -8 507 1 5386 187 40 73 chr2 129793743 129794725 -120893129 - L1MB3 LINE L1 -2 6181 5168 2177 113 0 19 chr2 129794725 129795036 -120892818 - AluSp SINE Alu -8 305 1 5386 187 40 73 chr2 129795036 129795502 -120892352 - L1MB3 LINE L1 -1015 5168 4688 842 216 0 0 chr2 129795502 129795655 -120892199 - AluJb SINE Alu -12 300 148 5386 187 40 73 chr2 129795655 129796356 -120891498 - L1MB3 LINE L1 -1495 4688 4011 1375 202 82 15 chr2 129796356 129796698 -120891156 - MLT1A1 LTR MaLR 0 365 1 5386 187 40 73 chr2 129796698 129797128 -120890726 - L1MB3 LINE L1 -2172 4011 3568 311 256 26 0 chr2 129797209 129797287 -120890567 + MIR SINE MIR 74 153 -55 405 0 0 0 chr2 129797865 129797910 -120889944 + (CA)n Simple_repeat Simple_repeat 1 45 0 1024 272 74 54 chr2 129801418 129801582 -120886272 - L1ME LINE L1 -1993 4153 3994 1555 131 52 79 chr2 129801582 129801887 -120885967 - AluSx SINE Alu -15 297 1 1024 272 74 54 chr2 129801887 129802317 -120885537 - L1ME LINE L1 -2152 3994 3547 306 232 26 93 chr2 129802356 129802507 -120885347 - L1MC4 LINE L1 0 8042 7902 183 286 33 55 chr2 129802875 129802966 -120884888 - MIR SINE MIR -111 151 63 269 287 69 0 chr2 129803137 129803224 -120884630 + MIR SINE MIR 110 202 -60 212 333 24 12 chr2 129806527 129806611 -120881243 - MIR SINE MIR -122 140 56 1968 116 49 0 chr2 129807788 129808073 -120879781 + AluSx SINE Alu 1 299 -13 544 220 54 65 chr2 129810583 129810751 -120877103 + MIR SINE MIR 33 198 -64 525 243 80 44 chr2 129810866 129811092 -120876762 - MLT1J LTR MaLR -51 460 227 936 154 6 59 chr2 129812763 129812932 -120874922 - FRAM SINE Alu -6 160 1 198 0 0 0 chr2 129813220 129813242 -120874612 + (A)n Simple_repeat Simple_repeat 1 22 0 2112 86 7 26 chr2 129816137 129816439 -120871415 + AluSx SINE Alu 1 296 -16 242 194 0 32 chr2 129816567 129816629 -120871225 - L1ME LINE L1 -320 5850 5791 312 390 123 18 chr2 129816657 129816998 -120870856 - L1ME LINE L1 -441 5729 5353 1448 261 143 39 chr2 129817001 129817583 -120870271 - HAL1 LINE L1 0 2507 1987 2101 112 54 10 chr2 129817583 129817878 -120869976 - AluSx SINE Alu -4 308 1 1448 261 143 39 chr2 129817878 129817987 -120869867 - HAL1 LINE L1 -520 1987 1891 212 0 0 35 chr2 129817987 129818016 -120869838 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1448 261 143 39 chr2 129818016 129818243 -120869611 - HAL1 LINE L1 -616 1891 1492 303 243 146 14 chr2 129818308 129818452 -120869402 - HAL1 LINE L1 -1137 1370 1208 352 304 148 53 chr2 129827375 129827842 -120860012 - L1MC4 LINE L1 -5 8037 7527 2570 65 10 0 chr2 129827852 129828160 -120859694 + AluY SINE Alu 1 311 0 2218 103 17 3 chr2 129828883 129829175 -120858679 + AluSx SINE Alu 1 296 -16 195 176 0 0 chr2 129830007 129830041 -120857813 + MIR SINE MIR 113 146 -116 2166 98 30 3 chr2 129830046 129830341 -120857513 + AluSq SINE Alu 1 303 -10 181 130 43 22 chr2 129830434 129830480 -120857374 - MER5A DNA MER1_type -29 160 114 1671 249 55 29 chr2 129831944 129832367 -120855487 + MLT1J LTR MaLR 2 441 -70 2276 112 16 0 chr2 129832367 129832672 -120855182 + AluSq SINE Alu 1 310 -3 1671 249 55 29 chr2 129832672 129832738 -120855116 + MLT1J LTR MaLR 441 504 -7 1762 190 3 13 chr2 129832940 129833251 -120854603 + AluJo SINE Alu 1 308 -4 300 323 78 26 chr2 129833297 129833489 -120854365 + HAL1 LINE L1 1140 1341 -1166 310 238 27 14 chr2 129833575 129833722 -120854132 + (TA)n Simple_repeat Simple_repeat 1 149 0 1965 125 10 40 chr2 129834293 129834597 -120853257 - AluSx SINE Alu -17 295 1 2666 244 45 8 chr2 129834597 129835386 -120852468 - L1MDa LINE L1 -3076 3464 2643 1920 161 0 40 chr2 129835423 129835745 -120852109 - AluJb SINE Alu -3 309 1 7540 166 65 53 chr2 129835759 129837083 -120850771 - L1MDa LINE L1 -3892 2648 1342 1732 171 25 7 chr2 129837083 129837397 -120850457 - AluSx SINE Alu 0 319 1 7540 166 65 53 chr2 129837397 129838198 -120849656 - L1MDa LINE L1 -5198 1342 552 2229 118 15 56 chr2 129838198 129838386 -120849468 + THE1C LTR MaLR 1 195 -180 2375 84 7 0 chr2 129838386 129838682 -120849172 + AluSp SINE Alu 1 298 -15 180 0 0 0 chr2 129838682 129838702 -120849152 + (TA)n Simple_repeat Simple_repeat 2 21 0 2229 118 15 56 chr2 129838702 129838903 -120848951 + THE1C LTR MaLR 193 375 0 7540 166 65 53 chr2 129838903 129839031 -120848823 - L1MDa LINE L1 -5988 552 31 2039 104 29 11 chr2 129839107 129839432 -120848422 - AluSq SINE Alu 0 330 1 2324 108 88 51 chr2 129840100 129840292 -120847562 + MER4B LTR ERV1 1 184 -582 2292 111 0 0 chr2 129840292 129840590 -120847264 + AluSx SINE Alu 1 298 -14 2324 108 88 51 chr2 129840590 129840724 -120847130 + MER4B LTR ERV1 184 312 -454 2248 102 14 0 chr2 129840724 129841019 -120846835 + AluSx SINE Alu 1 299 -13 2324 108 88 51 chr2 129841019 129841263 -120846591 + MER4B LTR ERV1 312 754 -12 2393 95 0 0 chr2 129841263 129841557 -120846297 - AluSq SINE Alu -19 294 1 558 245 125 0 chr2 129841654 129841838 -120846016 + LTR16C LTR ERVL 285 491 0 265 227 51 45 chr2 129842481 129842657 -120845197 + (TATG)n Simple_repeat Simple_repeat 4 180 0 1326 246 60 5 chr2 129842943 129843357 -120844497 - L1ME LINE L1 -371 6073 5637 * 3123 158 42 19 chr2 129843355 129843787 -120844067 - L1MC1 LINE L1 -31 6302 5851 2550 72 0 3 chr2 129843787 129844092 -120843762 + AluSx SINE Alu 1 304 -8 3123 158 42 19 chr2 129844092 129844252 -120843602 - L1MC1 LINE L1 -482 5851 5696 4643 239 40 38 chr2 129844254 129844620 -120843234 - L1ME LINE L1 -2214 4212 3848 1968 156 3 23 chr2 129844620 129844757 -120843097 + AluSx SINE Alu 1 139 -173 2272 116 3 0 chr2 129844757 129845060 -120842794 + AluSp SINE Alu 1 304 -9 1968 156 3 23 chr2 129845060 129845223 -120842631 + AluSx SINE Alu 139 295 -17 4643 239 40 38 chr2 129845223 129845793 -120842061 - L1ME LINE L1 -2578 3848 3281 2339 165 5 15 chr2 129845793 129846193 -120841661 + MSTD LTR MaLR 1 396 0 4643 239 40 38 chr2 129846193 129846904 -120840950 - L1ME LINE L1 -3145 3281 2561 373 74 0 0 chr2 129846905 129846959 -120840895 - Alu SINE Alu -1 299 246 516 133 0 0 chr2 129846960 129847043 -120840811 + (TG)n Simple_repeat Simple_repeat 2 84 0 2403 85 3 0 chr2 129847074 129847369 -120840485 - AluSp SINE Alu -17 296 1 9054 137 107 99 chr2 129847370 129847550 -120840304 - L1ME LINE L1 -3955 2471 2294 2316 107 3 0 chr2 129847550 129847850 -120840004 + AluSx SINE Alu 2 302 -10 9054 137 107 99 chr2 129847850 129848192 -120839662 - L1ME LINE L1 -4132 2294 1956 910 96 0 0 chr2 129848192 129848307 -120839547 - AluSq/x SINE Alu -198 115 1 9054 137 107 99 chr2 129848307 129849577 -120838277 - L1ME LINE L1 -4470 1956 698 1854 124 7 10 chr2 129849577 129849884 -120837970 + L1MA4A LINE L1 5995 6300 -3 1679 167 33 20 chr2 129849888 129850187 -120837667 + AluJb SINE Alu 1 303 -9 9054 137 107 99 chr2 129850187 129850705 -120837149 - L1ME LINE L1 -5730 696 20 494 250 47 24 chr2 129850733 129850945 -120836909 - L1M4 LINE L1 -830 5316 5100 1121 263 42 48 chr2 129850946 129851226 -120836628 + MLT1J LTR MaLR 153 432 -79 2361 108 0 0 chr2 129851226 129851532 -120836322 - AluSx SINE Alu -6 306 1 1121 263 42 48 chr2 129851532 129851609 -120836245 + MLT1J LTR MaLR 432 508 -3 188 300 22 56 chr2 129851823 129851913 -120835941 - MER5B DNA MER1_type -85 93 7 282 231 53 112 chr2 129852182 129852309 -120835545 + MIR SINE MIR 86 202 -60 2071 148 0 3 chr2 129852309 129852607 -120835247 - AluSx SINE Alu -15 297 1 282 231 53 112 chr2 129852607 129852648 -120835206 + MIR SINE MIR 202 244 -18 2003 146 3 3 chr2 129853078 129853373 -120834481 + AluJo SINE Alu 6 300 -12 1777 196 10 64 chr2 129853421 129853535 -120834319 + MLT1B LTR MaLR 1 120 -270 766 213 67 0 chr2 129853535 129853699 -120834155 + FAM SINE Alu 1 175 0 1777 196 10 64 chr2 129853699 129853992 -120833862 + MLT1B LTR MaLR 120 386 -4 1587 158 30 7 chr2 129854334 129854637 -120833217 - MER89 LTR ERV1 0 559 250 688 108 0 0 chr2 129854637 129854730 -120833124 + AluSq/x SINE Alu 43 135 -178 1929 156 14 0 chr2 129854730 129855018 -120832836 + AluSx SINE Alu 1 292 -20 1032 219 31 23 chr2 129855020 129855276 -120832578 - MER89 LTR ERV1 -296 263 6 235 228 95 2 chr2 129855473 129855586 -120832268 + L1MC5 LINE L1 7805 8042 0 561 254 115 49 chr2 129856101 129856293 -120831561 + L2 LINE L2 2497 2716 -598 2112 106 46 0 chr2 129856293 129856576 -120831278 + AluSp SINE Alu 6 301 -12 561 254 115 49 chr2 129856576 129856671 -120831183 + L2 LINE L2 2716 2803 -511 267 238 36 12 chr2 129856807 129856891 -120830963 + MLT1F LTR MaLR 282 367 -175 212 237 0 0 chr2 129857071 129857109 -120830745 + (TG)n Simple_repeat Simple_repeat 2 39 0 249 308 37 25 chr2 129857374 129857574 -120830280 - L1MC4a LINE L1 -347 5821 5725 2203 109 3 0 chr2 129857952 129858245 -120829609 - AluSq SINE Alu -4 309 16 918 234 74 0 chr2 129858466 129858723 -120829131 - MER119 DNA MER1_type -5 578 303 577 129 0 20 chr2 129859773 129859874 -120827980 + AluJb SINE Alu 134 232 -80 422 136 0 0 chr2 129859974 129860040 -120827814 - AluS SINE Alu -244 67 2 2236 115 3 6 chr2 129860151 129860464 -120827390 + AluSx SINE Alu 1 312 0 400 203 58 58 chr2 129860582 129860720 -120827134 - MIR SINE MIR -70 192 55 889 255 114 27 chr2 129861061 129861437 -120826417 + MLT1I LTR MaLR 1 409 0 268 263 183 7 chr2 129861473 129861610 -120826244 + MIR SINE MIR 101 261 -1 297 282 63 37 chr2 129861828 129862176 -120825678 - L1ME4a LINE L1 -6 6115 5759 270 267 40 10 chr2 129862199 129862300 -120825554 - L2 LINE L2 -21 3251 3148 1165 306 77 46 chr2 129862435 129863212 -120824642 + L1MEd LINE L1 72 872 -5247 318 305 55 28 chr2 129863320 129863571 -120824283 - MLT1L LTR MaLR -2 597 352 926 165 0 9 chr2 129863643 129863992 -120823862 + (CCA)n Simple_repeat Simple_repeat 1 345 0 218 291 13 13 chr2 129864510 129864589 -120823265 + MIR SINE MIR 178 256 -6 2248 113 0 19 chr2 129864604 129864923 -120822931 - AluSq SINE Alu 0 313 1 3328 238 96 6 chr2 129865576 129867220 -120820634 - L1ME2 LINE L1 -7 6952 5153 3535 228 61 46 chr2 129867220 129868235 -120819619 - L1ME2 LINE L1 -2123 4818 3779 1619 191 4 0 chr2 129868235 129868507 -120819347 - AluJb SINE Alu -10 302 30 3535 228 61 46 chr2 129868507 129868761 -120819093 - L1ME2 LINE L1 -3162 3779 3530 673 146 0 0 chr2 129868858 129868961 -120818893 + MER6B DNA MER2_type 1 103 -173 2157 111 3 3 chr2 129868962 129869260 -120818594 - AluSq SINE Alu -15 298 1 2021 248 60 53 chr2 129869275 129869884 -120817970 - L1ME2 LINE L1 -3427 3514 2911 180 0 0 0 chr2 129869884 129869904 -120817950 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 2021 248 60 53 chr2 129869904 129870014 -120817840 - L1ME2 LINE L1 -4030 2911 2803 1011 184 61 0 chr2 129870014 129870210 -120817644 + MER6B DNA MER2_type 2 209 -1 2021 248 60 53 chr2 129870210 129870224 -120817630 - L1ME2 LINE L1 -4138 2803 2791 1390 84 42 76 chr2 129870224 129870371 -120817483 + MER30 DNA MER1_type 1 139 -91 1951 119 18 0 chr2 129870371 129870649 -120817205 + AluSx SINE Alu 14 296 -16 1390 84 42 76 chr2 129870649 129870739 -120817115 + MER30 DNA MER1_type 139 230 0 2021 248 60 53 chr2 129870739 129871388 -120816466 - L1ME2 LINE L1 -4150 2791 2148 2169 110 0 3 chr2 129871388 129871687 -120816167 + AluSc SINE Alu 1 298 -11 2021 248 60 53 chr2 129871687 129872428 -120815426 - L1ME2 LINE L1 -4793 2148 1208 312 307 127 13 chr2 129872559 129872787 -120815067 - L1ME2 LINE L1 -6104 319 66 810 330 85 9 chr2 129872829 129873162 -120814692 + L1ME LINE L1 4951 5329 -916 1899 125 29 0 chr2 129873162 129873471 -120814383 + AluSc SINE Alu 1 309 0 810 330 85 9 chr2 129873471 129873645 -120814209 + L1ME LINE L1 5329 5488 -757 2153 120 0 3 chr2 129873673 129873974 -120813880 + AluSq SINE Alu 1 300 -13 423 0 0 0 chr2 129873975 129874022 -120813832 + (TA)n Simple_repeat Simple_repeat 2 48 0 255 29 0 0 chr2 129874022 129874056 -120813798 + tRNA-Cys-TGC tRNA tRNA 2 35 -40 900 297 120 27 chr2 129874056 129874457 -120813397 - L2 LINE L2 -13 3300 2863 643 294 82 14 chr2 129874498 129874791 -120813063 + L1ME LINE L1 5512 5824 -297 1974 97 48 0 chr2 129874791 129875088 -120812766 + AluSg SINE Alu 1 310 0 24 32 0 0 chr2 129875147 129875178 -120812676 + AT_rich Low_complexity Low_complexity 1 31 0 1978 113 0 7 chr2 129875383 129875685 -120812169 + AluSg1 SINE Alu 1 300 0 569 302 90 78 chr2 129875685 129876354 -120811500 + L1ME4a LINE L1 5445 6121 0 223 296 106 15 chr2 129876631 129876763 -120811091 + MER5B DNA MER1_type 6 149 -29 2439 84 3 0 chr2 129877183 129877492 -120810362 - AluSp SINE Alu -3 310 1 566 221 156 45 chr2 129877501 129877745 -120810109 - L1MD2 LINE L1 0 6359 6089 769 258 23 9 chr2 129878847 129879068 -120808786 + L1MDb LINE L1 8 231 -6178 313 309 79 30 chr2 129879190 129879355 -120808499 + MIR SINE MIR 84 256 -6 752 227 22 0 chr2 129879437 129879607 -120808247 - MIR SINE MIR -59 203 32 332 259 78 6 chr2 129879890 129880046 -120807808 + MIR SINE MIR 59 233 -29 28 61 0 0 chr2 129882046 129882095 -120805759 + GC_rich Low_complexity Low_complexity 1 49 0 26 74 0 0 chr2 129882297 129882351 -120805503 + GC_rich Low_complexity Low_complexity 1 54 0 206 266 0 31 chr2 129883226 129883290 -120804564 + MIR SINE MIR 84 145 -63 378 291 108 54 chr2 129883477 129883700 -120804154 + MIR SINE MIR 14 248 -14 190 84 28 70 chr2 129885369 129885440 -120802414 + (CGGGG)n Simple_repeat Simple_repeat 2 69 0 492 130 11 22 chr2 129888057 129888149 -120799705 - AluYb8 SINE Alu 0 318 228 221 281 11 54 chr2 129888153 129888338 -120799516 + CT-rich Low_complexity Low_complexity 2 178 0 237 302 0 0 chr2 129889697 129889760 -120798094 + MIR SINE MIR 181 243 -19 2161 100 3 0 chr2 129890184 129890474 -120797380 - AluSg SINE Alu -19 291 1 1845 164 0 26 chr2 129890480 129890785 -120797069 - AluJb SINE Alu -15 297 1 2319 135 105 3 chr2 129890833 129891225 -120796629 + Tigger2a DNA MER2_type 1 432 -2 24 32 0 0 chr2 129891229 129891260 -120796594 + AT_rich Low_complexity Low_complexity 1 31 0 1722 134 22 0 chr2 129891260 129891536 -120796318 - AluSg SINE Alu -11 299 18 247 330 0 0 chr2 129892121 129892221 -120795633 - MER117 DNA MER1_type -39 158 59 213 39 0 0 chr2 129893131 129893157 -120794697 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 232 174 0 58 chr2 129893178 129893247 -120794607 - L1ME4a LINE L1 -7 6114 6050 361 299 24 40 chr2 129893986 129894152 -120793702 + MIR SINE MIR 7 168 -63 238 353 67 25 chr2 129894307 129894426 -120793428 - MIR SINE MIR -71 137 13 268 237 40 0 chr2 129896388 129896464 -120791390 + L2 LINE L2 1922 2000 -1314 253 328 85 11 chr2 129896557 129896746 -120791108 + LTR16A LTR ERVL 134 336 -114 262 308 84 14 chr2 129897781 129897924 -120789930 + HERV16 LTR ERVL 1059 1211 -3785 751 227 88 99 chr2 129898232 129898597 -120789257 + MLT1A1 LTR MaLR 5 365 0 2359 96 3 0 chr2 129900987 129901299 -120786555 - AluSp SINE Alu 0 313 1 973 251 127 30 chr2 129901330 129901800 -120786054 - MLT1F1 LTR MaLR -7 560 43 438 310 155 0 chr2 129901815 129902054 -120785800 + MLT1G1 LTR MaLR 6 281 -314 275 222 42 0 chr2 129902170 129902242 -120785612 + MLT1G1 LTR MaLR 473 547 -48 199 367 48 27 chr2 129905291 129905438 -120782416 - L2 LINE L2 -541 2773 2624 208 0 30 30 chr2 129905562 129905595 -120782259 + (GGGTG)n Simple_repeat Simple_repeat 1 33 0 242 301 86 0 chr2 129907158 129907263 -120780591 - MIR SINE MIR -104 104 44 820 173 22 39 chr2 129909595 129909774 -120778080 + FRAM SINE Alu 1 40 0 242 323 0 0 chr2 129909949 129910014 -120777840 + (CA)n Simple_repeat Simple_repeat 2 66 0 296 314 26 51 chr2 129911557 129911713 -120776141 + L2 LINE L2 2932 3083 -189 212 167 0 0 chr2 129911803 129911845 -120776009 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 486 269 14 41 chr2 129912130 129912275 -120775579 + MIR SINE MIR 46 186 -76 402 287 19 0 chr2 129912747 129912855 -120774999 + MER81 DNA DNA 1 110 -4 456 327 138 16 chr2 129913103 129913561 -120774293 - L2 LINE L2 -27 3245 2724 248 267 13 0 chr2 129913599 129913674 -120774180 - MIR3 SINE MIR -52 156 81 5508 216 94 46 chr2 129914687 129914983 -120772871 + L1MC/D LINE L1 1 281 -6259 2138 132 0 3 chr2 129914983 129915294 -120772560 + AluSx SINE Alu 1 310 -2 5508 216 94 46 chr2 129915294 129915829 -120772025 + L1MC/D LINE L1 281 789 -5751 2277 79 3 0 chr2 129915829 129916120 -120771734 + AluSp SINE Alu 1 292 -21 5508 216 94 46 chr2 129916120 129917126 -120770728 + L1MC/D LINE L1 789 1745 -4795 1833 144 23 13 chr2 129917126 129917431 -120770423 + AluSx SINE Alu 2 309 -3 5508 216 94 46 chr2 129917431 129918683 -120769171 + L1MC/D LINE L1 1745 2935 -3605 210 37 0 0 chr2 129918683 129918710 -120769144 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5508 216 94 46 chr2 129918710 129919021 -120768833 + L1MC/D LINE L1 2935 3230 -3310 2322 95 0 3 chr2 129919021 129919315 -120768539 + AluSg SINE Alu 1 293 -17 5508 216 94 46 chr2 129919315 129920025 -120767829 + L1MC/D LINE L1 3230 3904 -2636 2344 110 0 0 chr2 129920025 129920334 -120767520 + AluSx SINE Alu 1 309 -3 5508 216 94 46 chr2 129920334 129920438 -120767416 + L1MC/D LINE L1 3904 5524 -1016 722 233 44 9 chr2 129920656 129920718 -120767136 + L1MC/D LINE L1 5598 5656 -918 240 35 0 0 chr2 129920718 129920747 -120767107 + (TA)n Simple_repeat Simple_repeat 1 29 0 722 233 44 9 chr2 129920747 129920903 -120766951 + L1MC/D LINE L1 5656 5830 -744 306 267 29 29 chr2 129921742 129921847 -120766007 - MIR SINE MIR -108 154 50 209 358 89 0 chr2 129922624 129922747 -120765107 - MIR SINE MIR -62 200 67 1106 193 173 6 chr2 129923136 129923453 -120764401 + MER47B DNA MER2_type 10 417 -1 1906 150 28 88 chr2 129923888 129924075 -120763779 - THE1B LTR MaLR 0 364 210 2184 123 7 0 chr2 129924075 129924368 -120763486 - AluSx SINE Alu -15 297 3 1906 150 28 88 chr2 129924368 129924567 -120763287 - THE1B LTR MaLR -154 210 1 1312 275 64 54 chr2 129924645 129925566 -120762288 + L1MEd LINE L1 420 1388 -4862 268 219 375 8 chr2 129926179 129926307 -120761547 - MIR SINE MIR -65 197 23 1693 181 72 31 chr2 129927953 129928312 -120759542 + MLT1A2 LTR MaLR 1 374 0 368 282 0 0 chr2 129928788 129928873 -120758981 + MIR SINE MIR 47 131 -131 831 335 45 59 chr2 129928901 129929495 -120758359 - HAL1 LINE L1 -770 1737 1152 292 219 86 47 chr2 129929529 129929657 -120758197 + HAL1 LINE L1 947 1079 -1428 256 215 25 63 chr2 129929742 129929821 -120758033 + MER5A DNA MER1_type 4 79 -110 1129 72 7 0 chr2 129929880 129930018 -120757836 - AluSq/x SINE Alu -173 139 1 2146 174 34 47 chr2 129930198 129930327 -120757527 + MLT1C LTR MaLR 3 132 -335 2484 56 0 3 chr2 129930327 129930614 -120757240 + AluSc SINE Alu 1 286 -23 2146 174 34 47 chr2 129930614 129930955 -120756899 + MLT1C LTR MaLR 132 467 0 195 100 0 0 chr2 129931982 129932012 -120755842 + (ATTAG)n Simple_repeat Simple_repeat 5 34 0 415 225 20 66 chr2 129932713 129932811 -120755043 + L1MA9 LINE L1 5954 6044 -268 2397 96 0 0 chr2 129932811 129933112 -120754742 + AluSx SINE Alu 1 301 -11 415 225 20 66 chr2 129933112 129933164 -120754690 + L1MA9 LINE L1 6044 6097 -215 1106 366 3 74 chr2 129933230 129933555 -120754299 - AluSx SINE Alu 0 302 1 2246 77 14 0 chr2 129933586 129933871 -120753983 + AluSg SINE Alu 1 289 -21 2185 100 3 3 chr2 129933881 129934171 -120753683 + AluSg SINE Alu 1 290 -20 2303 107 3 0 chr2 129934180 129934489 -120753365 + AluSg SINE Alu 1 310 0 861 286 61 34 chr2 129934638 129935113 -120752741 + L1ME3 LINE L1 5337 5826 -336 1131 82 0 0 chr2 129935249 129935384 -120752470 + AluY SINE Alu 1 135 -176 1965 109 72 0 chr2 129935385 129935661 -120752193 + AluSx SINE Alu 2 297 -15 2159 93 0 55 chr2 129935663 129935973 -120751881 + AluSg SINE Alu 1 293 -17 1005 198 88 74 chr2 129935974 129936203 -120751651 + L1MD2 LINE L1 1785 2009 -4531 2215 107 0 3 chr2 129936203 129936493 -120751361 + AluSg SINE Alu 10 298 -12 1005 198 88 74 chr2 129936493 129936561 -120751293 + L1MD2 LINE L1 2009 2075 -4465 1932 186 0 0 chr2 129936561 129936867 -120750987 + AluSx SINE Alu 5 310 -2 1005 198 88 74 chr2 129936867 129936987 -120750867 + L1MD2 LINE L1 2075 2209 -4331 756 156 80 3 chr2 129936987 129937227 -120750627 - MER7A DNA MER2_type -1 336 8 612 193 10 47 chr2 129937227 129937419 -120750435 + L1MD2 LINE L1 2211 2395 -4145 2384 93 0 19 chr2 129937450 129937761 -120750093 - AluY SINE Alu -6 305 1 224 143 20 0 chr2 129937761 129937802 -120750052 + CT-rich Low_complexity Low_complexity 7 51 0 329 236 91 18 chr2 129937837 129937947 -120749907 + L1MD2 LINE L1 2384 2501 -4039 765 167 0 0 chr2 129938051 129938229 -120749625 - AluSg/x SINE Alu 0 347 170 2270 101 0 0 chr2 129938230 129938517 -120749337 + AluSx SINE Alu 24 310 -2 1119 217 124 23 chr2 129938519 129938679 -120749175 + L1MD2 LINE L1 2524 2667 -3873 2449 151 53 17 chr2 129938679 129939090 -120748764 - MSTC LTR MaLR -2 426 1 1119 217 124 23 chr2 129939090 129939357 -120748497 + L1MD2 LINE L1 2667 2994 -3546 1855 156 29 43 chr2 129939360 129939594 -120748260 - MSTB LTR MaLR 0 426 197 2102 143 3 7 chr2 129939594 129939901 -120747953 - AluJo SINE Alu -6 306 1 1855 156 29 43 chr2 129939901 129940012 -120747842 - MSTB LTR MaLR -229 197 86 258 62 0 0 chr2 129940017 129940049 -120747805 - MSTB LTR MaLR -324 133 102 258 62 0 0 chr2 129940054 129940086 -120747768 - MSTB LTR MaLR -309 117 86 258 62 0 0 chr2 129940091 129940123 -120747731 - MSTB LTR MaLR -309 117 86 258 62 0 0 chr2 129940128 129940160 -120747694 - MSTB LTR MaLR -309 117 86 258 62 0 0 chr2 129940165 129940197 -120747657 - MSTB LTR MaLR -309 117 86 258 62 0 0 chr2 129940202 129940234 -120747620 - MSTB2 LTR MaLR -324 133 102 258 62 0 0 chr2 129940239 129940271 -120747583 - MSTB LTR MaLR -309 117 86 258 62 0 0 chr2 129940276 129940308 -120747546 - MSTB LTR MaLR -309 117 86 258 62 0 0 chr2 129940313 129940345 -120747509 - MSTB LTR MaLR -309 117 86 * 773 161 25 23 chr2 129940331 129940505 -120747349 - MSTB LTR MaLR -250 178 1 1089 245 23 3 chr2 129940518 129940828 -120747026 + L1MD2 LINE L1 3006 3321 -3219 546 197 63 24 chr2 129940832 129940959 -120746895 + FLAM_C SINE Alu 2 133 0 2010 166 0 0 chr2 129940994 129941296 -120746558 + AluJb SINE Alu 1 302 -10 671 192 65 65 chr2 129941299 129941513 -120746341 + L1MD2 LINE L1 3913 4126 -2414 797 150 0 34 chr2 129941516 129941636 -120746218 + MSTC LTR MaLR 282 398 -30 2435 169 97 31 chr2 129941636 129941775 -120746079 + LTR49 LTR ERV1 2 130 -465 2215 109 0 0 chr2 129941775 129942084 -120745770 + AluSq SINE Alu 1 309 0 2435 169 97 31 chr2 129942084 129942499 -120745355 + LTR49 LTR ERV1 130 594 -1 797 150 0 34 chr2 129942499 129942525 -120745329 + MSTC LTR MaLR 398 423 -5 838 180 104 40 chr2 129942530 129942600 -120745254 + L1MD2 LINE L1 5752 5816 -820 2364 104 3 3 chr2 129942600 129942907 -120744947 + AluSx SINE Alu 1 307 -5 838 180 104 40 chr2 129942907 129943058 -120744796 + L1MD2 LINE L1 5816 5987 -649 2808 117 51 24 chr2 129943066 129943637 -120744217 - MER4B LTR ERV1 -9 770 1 528 145 22 87 chr2 129943637 129943739 -120744115 + L1MD2 LINE L1 5985 6077 -676 1984 134 0 33 chr2 129943739 129944045 -120743809 + AluJb SINE Alu 1 296 -16 528 145 22 87 chr2 129944045 129944080 -120743774 + L1MD2 LINE L1 6077 6113 -640 721 125 0 8 chr2 129944081 129944201 -120743653 + MER4B LTR ERV1 2 120 -490 1544 145 50 63 chr2 129944203 129944520 -120743334 + MER4E LTR ERV1 467 779 0 246 209 0 30 chr2 129944521 129944588 -120743266 + L1MD2 LINE L1 6111 6175 -461 871 128 8 15 chr2 129944592 129944725 -120743129 + FLAM_C SINE Alu 1 132 -1 2273 219 73 57 chr2 129944742 129945456 -120742398 - MER50 LTR ERV1 0 734 10 545 171 9 57 chr2 129945462 129945567 -120742287 + AluJb SINE Alu 147 246 -66 2358 67 0 10 chr2 129945588 129945886 -120741968 + AluY SINE Alu 2 296 -15 405 143 16 0 chr2 129945980 129946043 -120741811 + AluJb SINE Alu 234 297 -15 1578 234 55 46 chr2 129946071 129946619 -120741235 + L1MD2 LINE L1 6176 6728 -25 21 0 0 0 chr2 129946619 129946640 -120741214 + AT_rich Low_complexity Low_complexity 1 21 0 2111 112 0 0 chr2 129946710 129947012 -120740842 - AluSg SINE Alu 0 304 3 2326 105 0 0 chr2 129947777 129948071 -120739783 - AluSp SINE Alu -19 294 1 538 192 65 113 chr2 129948081 129948221 -120739633 + L1ME4a LINE L1 5150 5295 -871 2196 105 10 7 chr2 129948221 129948517 -120739337 - AluSq SINE Alu -16 297 1 538 192 65 113 chr2 129948517 129948695 -120739159 + L1ME4a LINE L1 5295 5468 -698 681 161 40 16 chr2 129948695 129948819 -120739035 - FRAM SINE Alu -20 156 30 2368 108 5 169 chr2 129948820 129949394 -120738460 - LTR12 LTR ERV1 -234 480 1 796 160 15 0 chr2 129949440 129949571 -120738283 - FLAM_C SINE Alu 0 133 1 1090 252 4 11 chr2 129949573 129949839 -120738015 + L1ME4a LINE L1 5458 5721 -445 810 174 63 32 chr2 129950368 129950558 -120737296 + AluJo SINE Alu 117 312 0 487 274 186 43 chr2 129950625 129951015 -120736839 + HAL1 LINE L1 1564 1897 -610 2291 122 0 0 chr2 129951015 129951319 -120736535 + AluSx SINE Alu 1 304 -8 487 274 186 43 chr2 129951319 129951330 -120736524 + HAL1 LINE L1 1897 1905 -602 186 43 0 0 chr2 129951330 129951353 -120736501 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 487 274 186 43 chr2 129951353 129951482 -120736372 + HAL1 LINE L1 1905 2171 -336 1386 197 121 25 chr2 129951522 129951878 -120735976 - MLT1B LTR MaLR 0 390 1 390 57 0 0 chr2 129952102 129952155 -120735699 + (TG)n Simple_repeat Simple_repeat 1 53 0 747 181 0 0 chr2 129952167 129952283 -120735571 - FLAM_C SINE Alu -15 118 3 2302 109 0 0 chr2 129952300 129952603 -120735251 - AluSq SINE Alu -10 303 1 239 372 15 5 chr2 129952927 129953123 -120734731 + MLT1L LTR MaLR 418 615 0 2246 132 0 0 chr2 129953184 129953495 -120734359 + AluSx SINE Alu 1 311 -1 352 236 236 0 chr2 129953523 129953663 -120734191 + L1ME4a LINE L1 5945 6117 -4 29 28 0 0 chr2 129953703 129953739 -120734115 + AT_rich Low_complexity Low_complexity 1 36 0 329 173 67 40 chr2 129953810 129953885 -120733969 + L1MB4 LINE L1 3668 3744 -2402 792 211 13 0 chr2 129953901 129954053 -120733801 + AluJb SINE Alu 120 273 -39 1092 201 125 35 chr2 129954072 129954225 -120733629 + L1MB4 LINE L1 5237 5375 -799 2079 136 7 3 chr2 129954225 129954526 -120733328 + AluJb SINE Alu 1 302 -10 1092 201 125 35 chr2 129954526 129954715 -120733139 + L1MB4 LINE L1 5375 5609 -565 1144 103 0 4 chr2 129954717 129954922 -120732932 + AluSc SINE Alu 2 294 -15 1326 136 21 8 chr2 129954922 129955158 -120732696 + L1MB4 LINE L1 5598 5836 -344 1078 221 58 26 chr2 129955158 129955470 -120732384 + MLT1A2 LTR MaLR 1 322 -52 830 163 17 79 chr2 129955605 129957128 -120730726 - SVA Other Other -710 676 452 307 148 12 111 chr2 129957130 129957158 -120730696 + MLT1A2 LTR MaLR 290 319 -46 1896 165 0 15 chr2 129957158 129957497 -120730357 + MER1B DNA MER1_type 4 337 0 307 148 12 111 chr2 129957497 129957549 -120730305 + MLT1A2 LTR MaLR 319 362 -3 1891 161 11 20 chr2 129957560 129957706 -120730148 + L1MB4 LINE L1 5829 5975 -205 2109 117 3 26 chr2 129957706 129958015 -120729839 + AluSx SINE Alu 1 302 -10 1891 161 11 20 chr2 129958015 129958221 -120729633 + L1MB4 LINE L1 5975 6178 -2 761 200 0 0 chr2 129958248 129958378 -120729476 + FLAM_A SINE Alu 1 130 -3 247 183 28 56 chr2 129958378 129958449 -120729405 + L1M4 LINE L1 2481 2549 -3597 4772 255 72 42 chr2 129958449 129958897 -120728957 - L1M4 LINE L1 -740 5674 5241 2198 122 7 7 chr2 129958897 129959200 -120728654 - AluSg1 SINE Alu -6 303 1 4772 255 72 42 chr2 129959200 129959899 -120727955 - L1M4 LINE L1 -1173 5241 4564 1902 176 0 0 chr2 129959899 129960189 -120727665 + AluJb SINE Alu 4 293 -19 4772 255 72 42 chr2 129960189 129960463 -120727391 - L1M4 LINE L1 -1850 4564 4300 2198 122 3 0 chr2 129960463 129960757 -120727097 - AluSx SINE Alu -17 295 1 4772 255 72 42 chr2 129960757 129961257 -120726597 - L1M4 LINE L1 -2114 4300 3632 1762 157 0 15 chr2 129961259 129961533 -120726321 + AluSq SINE Alu 1 270 -43 349 319 87 47 chr2 129962091 129962345 -120725509 - L1M4 LINE L1 -6038 346 83 368 274 85 65 chr2 129962422 129962623 -120725231 - L1MEc LINE L1 -3941 2443 2239 991 119 0 21 chr2 129962631 129962774 -120725080 - FLAM_C SINE Alu -3 140 1 2070 96 59 0 chr2 129962778 129963049 -120724805 - AluSq SINE Alu -22 291 5 518 292 61 14 chr2 129963071 129963434 -120724420 - L1MEc LINE L1 -4260 2303 1903 2273 41 16 85 chr2 129963435 129963751 -120724103 - AluY SINE Alu -16 295 2 934 113 0 43 chr2 129963751 129963892 -120723962 - AluSq/x SINE Alu -177 135 1 24 0 0 0 chr2 129963914 129963938 -120723916 + AT_rich Low_complexity Low_complexity 1 24 0 2127 124 0 0 chr2 129964156 129964464 -120723390 - AluY SINE Alu 0 308 1 2393 49 0 7 chr2 129964714 129964998 -120722856 - AluY SINE Alu -7 304 23 481 265 128 44 chr2 129965524 129965608 -120722246 - L1MEc LINE L1 -4677 1886 1810 2220 92 10 3 chr2 129965608 129965903 -120721951 - AluSx SINE Alu -15 297 1 481 265 128 44 chr2 129965903 129966139 -120721715 - L1MEc LINE L1 -4753 1810 1539 780 203 101 55 chr2 129966163 129966588 -120721266 - MER74A LTR ERVL -36 522 1 453 226 64 44 chr2 129966591 129966795 -120721059 - L1MEc LINE L1 -4946 1334 1127 305 157 22 90 chr2 129966799 129966862 -120720992 + L1MA9 LINE L1 5996 6062 -250 1932 140 0 0 chr2 129966862 129967127 -120720727 + AluSq SINE Alu 1 265 -48 2330 107 0 0 chr2 129967127 129967427 -120720427 + AluSg SINE Alu 1 300 -10 305 157 22 90 chr2 129967427 129967451 -120720403 + L1MA9 LINE L1 6060 6078 -234 336 209 127 9 chr2 129967456 129967566 -120720288 + L1MA9 LINE L1 6180 6302 -10 2079 148 0 3 chr2 129967711 129968015 -120719839 - AluJb SINE Alu -9 303 1 253 275 110 0 chr2 129968049 129968158 -120719696 - L1MEc LINE L1 -5419 953 833 313 292 62 0 chr2 129968822 129968935 -120718919 + L1ME3A LINE L1 6046 6165 -5 650 85 0 0 chr2 129970157 129970239 -120717615 - AluS SINE Alu -229 83 2 1134 123 0 29 chr2 129970729 129970750 -120717104 + AluSp SINE Alu 117 137 -176 2245 108 0 16 chr2 129970750 129971057 -120716797 + AluSx SINE Alu 1 302 -10 1134 123 0 29 chr2 129971057 129971206 -120716648 + AluSp SINE Alu 137 282 -31 2190 98 7 24 chr2 129971758 129972054 -120715800 + AluSx SINE Alu 1 291 -21 2585 72 0 0 chr2 129972113 129972420 -120715434 - AluSc SINE Alu -2 307 1 2298 96 3 0 chr2 129973437 129973740 -120714114 - AluSg SINE Alu -6 304 1 231 309 67 48 chr2 129975944 129976109 -120711745 - L1ME LINE L1 -365 5756 5589 775 157 70 105 chr2 129976489 129976661 -120711193 - AluJb SINE Alu -18 294 129 375 171 0 0 chr2 129976706 129976776 -120711078 + L1MA5A LINE L1 6228 6297 0 2090 96 3 75 chr2 129976973 129977295 -120710559 + AluSx SINE Alu 1 299 -13 24 0 0 0 chr2 129978642 129978666 -120709188 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 129978688 129978708 -120709146 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1830 153 3 3 chr2 129978710 129978992 -120708862 - AluSx SINE Alu -30 282 1 1760 134 0 8 chr2 129979586 129979847 -120708007 + AluJo SINE Alu 46 304 -8 1783 106 113 18 chr2 129979847 129980129 -120707725 + AluSg SINE Alu 1 309 -1 2168 119 0 16 chr2 129980335 129980645 -120707209 + AluSx SINE Alu 1 305 -7 307 225 47 83 chr2 129980788 129980957 -120706897 + L1ME3A LINE L1 6008 6170 0 216 0 0 0 chr2 129981355 129981379 -120706475 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 261 0 0 0 chr2 129981378 129981407 -120706447 + (CA)n Simple_repeat Simple_repeat 1 29 0 377 258 120 64 chr2 129982181 129982603 -120705251 + L1MC4a LINE L1 5605 6110 -1698 2386 88 3 0 chr2 129982603 129982899 -120704955 - AluSx SINE Alu -15 297 1 377 258 120 64 chr2 129982899 129982993 -120704861 + L1MC4a LINE L1 6110 6197 -1611 735 179 0 58 chr2 129983422 129983578 -120704276 + MIR SINE MIR 101 247 -15 365 276 60 0 chr2 129986273 129986389 -120701465 + MIR3 SINE MIR 79 201 -7 2141 99 24 0 chr2 129988886 129989178 -120698676 - AluSq SINE Alu -6 307 9 2132 93 45 7 chr2 129990717 129991008 -120696846 + AluSq SINE Alu 1 302 -11 1204 209 19 4 chr2 129991575 129991834 -120696020 + L1ME1 LINE L1 5839 6101 -65 2585 179 43 2 chr2 129991965 129992451 -120695403 + L1MB7 LINE L1 5679 6184 0 2247 111 3 0 chr2 129993511 129993809 -120694045 + AluSx SINE Alu 1 299 -13 1594 202 34 3 chr2 129995923 129996220 -120691634 - AluJo SINE Alu -6 306 1 2135 141 0 3 chr2 129996240 129996553 -120691301 - AluSx SINE Alu 0 312 1 782 193 108 0 chr2 129997056 129997222 -120690632 + MER5A DNA MER1_type 6 189 0 453 172 43 11 chr2 129997770 129997863 -120689991 - MER5A DNA MER1_type -85 104 9 279 304 49 10 chr2 129998424 129998526 -120689328 + MER5B DNA MER1_type 57 162 -16 781 249 106 54 chr2 129998601 129999026 -120688828 + L1MC4 LINE L1 7484 7930 -112 420 239 51 22 chr2 129999084 129999222 -120688632 + L1MC4 LINE L1 7901 8042 0 1469 202 0 0 chr2 129999285 129999537 -120688317 + AluJb SINE Alu 30 281 -31 2161 105 3 0 chr2 129999617 129999902 -120687952 - AluSx SINE Alu -26 286 1 1318 151 143 16 chr2 129999915 130000173 -120687681 - AluJo SINE Alu -21 291 1 216 0 0 0 chr2 130001135 130001159 -120686695 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1325 166 85 12 chr2 130001162 130001421 -120686433 - AluJb SINE Alu -34 278 1 320 233 83 33 chr2 130001433 130001553 -120686301 - L1ME LINE L1 -305 5816 5691 2529 48 3 0 chr2 130001591 130001884 -120685970 - AluY SINE Alu -17 294 1 603 127 0 0 chr2 130002866 130002945 -120684909 - AluSg/x SINE Alu -18 292 214 1888 136 26 50 chr2 130002976 130003420 -120684434 + L1MB7 LINE L1 5181 5613 -567 555 213 49 12 chr2 130003600 130003764 -120684090 + L1MC5 LINE L1 6976 7145 -816 240 248 54 87 chr2 130005884 130005919 -120681935 + L2 LINE L2 2707 2742 -572 2294 98 0 10 chr2 130005919 130006224 -120681630 + AluSg SINE Alu 1 302 -8 240 248 54 87 chr2 130006224 130006337 -120681517 + L2 LINE L2 2742 2850 -464 1042 260 82 36 chr2 130006608 130007105 -120680749 + L1ME3A LINE L1 5651 6170 0 2203 105 0 38 chr2 130008448 130008762 -120679092 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr2 130010731 130010761 -120677093 + AT_rich Low_complexity Low_complexity 1 30 0 249 146 0 0 chr2 130011207 130011255 -120676599 + (TG)n Simple_repeat Simple_repeat 2 49 0 1273 167 128 0 chr2 130011569 130011826 -120676028 + L1MB7 LINE L1 5741 6030 -154 1631 193 30 27 chr2 130013375 130013743 -120674111 - MLT1A2 LTR MaLR -5 369 1 338 227 13 0 chr2 130013975 130014050 -120673804 - MIR SINE MIR -112 150 75 544 296 34 13 chr2 130014091 130014324 -120673530 + Charlie1 DNA MER1_type 1 238 -2523 * 556 174 35 83 chr2 130014307 130014363 -120673491 + Charlie1 DNA MER1_type 2620 2677 -84 766 278 40 0 chr2 130014363 130014561 -120673293 + MER63A DNA MER1_type 5 210 0 556 174 35 83 chr2 130014561 130014648 -120673206 + Charlie1 DNA MER1_type 2677 2756 -5 1202 171 197 3 chr2 130015134 130015433 -120672421 - MSTB1 LTR MaLR -6 426 70 2355 72 3 0 chr2 130016186 130016477 -120671377 - AluSp SINE Alu -21 292 1 368 319 75 16 chr2 130016650 130016838 -120671016 - MIR SINE MIR -52 210 12 249 309 91 40 chr2 130017221 130017496 -120670358 + MLT1K LTR MaLR 133 421 -167 269 257 0 76 chr2 130017537 130017642 -120670212 + MLT1L LTR MaLR 1 97 -518 4074 210 64 6 chr2 130017686 130019170 -120668684 + L1MB7 LINE L1 4390 5966 -212 338 109 0 0 chr2 130019173 130019219 -120668635 - MSTB LTR MaLR 0 426 381 1932 129 54 0 chr2 130019221 130019499 -120668355 + AluSx SINE Alu 3 295 -17 334 137 0 0 chr2 130019502 130019553 -120668301 + tRNA-Cys-TGC tRNA tRNA 1 51 -24 * 2433 105 81 3 chr2 130019538 130019910 -120667944 - MSTB LTR MaLR -25 401 1 738 143 137 50 chr2 130019910 130020092 -120667762 + L1MB7 LINE L1 5965 6162 -22 259 239 28 0 chr2 130020097 130020168 -120667686 + MLT1L LTR MaLR 535 607 -8 1141 178 0 0 chr2 130020263 130020454 -120667400 + L1MC4a LINE L1 5471 5661 -517 2823 128 14 34 chr2 130021169 130021562 -120666292 - MSTC LTR MaLR 0 428 42 2009 124 3 0 chr2 130021562 130021874 -120665980 - AluSx SINE Alu 0 313 1 2823 128 14 34 chr2 130021874 130021916 -120665938 - MSTC LTR MaLR -386 42 1 1858 246 53 55 chr2 130022400 130022892 -120664962 - L1ME3A LINE L1 -238 5932 5433 2480 187 79 40 chr2 130022892 130023438 -120664416 - MLT1F1 LTR MaLR 0 567 1 1858 246 53 55 chr2 130023438 130023822 -120664032 - L1ME3A LINE L1 -737 5433 5050 367 224 0 12 chr2 130023825 130023910 -120663944 + MLT2F LTR ERVL 4 87 -576 542 175 17 58 chr2 130023989 130024109 -120663745 + MLT1E3 LTR MaLR 51 165 -459 515 104 0 0 chr2 130024107 130024184 -120663670 + HY1 scRNA scRNA 34 110 -2 * 266 236 0 69 chr2 130024197 130024269 -120663585 + MLT1E3 LTR MaLR 156 222 -402 304 167 68 98 chr2 130024287 130024419 -120663435 + MLT2C1 LTR ERVL 269 396 -1 534 259 49 40 chr2 130024419 130024643 -120663211 - L1ME3A LINE L1 -1091 5055 4830 2098 116 0 0 chr2 130024947 130025261 -120662593 - AluSq SINE Alu 0 314 1 3199 92 26 9 chr2 130025465 130025923 -120661931 + L1MA3 LINE L1 5840 6305 0 358 367 45 15 chr2 130026229 130026493 -120661361 + L1MC4a LINE L1 5760 6031 -1777 298 229 29 0 chr2 130028996 130029066 -120658788 - LTR16C LTR ERVL 0 491 420 209 330 53 11 chr2 130029576 130029670 -120658184 + MIR SINE MIR 83 180 -82 214 313 30 0 chr2 130030154 130030221 -120657633 - L2 LINE L2 -10 3303 3235 2017 109 3 38 chr2 130030567 130030887 -120656967 - AluSg SINE Alu -1 309 1 256 361 12 54 chr2 130031935 130032101 -120655753 + MIR3 SINE MIR 44 202 -6 1199 257 32 59 chr2 130033042 130033481 -120654373 - MLT1H LTR MaLR 0 549 123 1361 159 7 59 chr2 130033683 130033954 -120653900 + AluJb SINE Alu 26 282 -30 237 139 0 0 chr2 130033956 130033999 -120653855 + (CATA)n Simple_repeat Simple_repeat 2 44 0 1003 267 204 26 chr2 130034382 130034999 -120652855 - HAL1 LINE L1 -151 2356 1630 439 300 145 4 chr2 130035001 130035228 -120652626 - LTR16A1 LTR ERVL -25 432 174 2176 112 3 0 chr2 130035955 130036258 -120651596 - AluSx SINE Alu -8 304 1 212 75 0 25 chr2 130036269 130036309 -120651545 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 6150 72 18 30 chr2 130036309 130037212 -120650642 - SVA Other Other -19 1367 476 581 58 19 10 chr2 130037275 130037378 -120650476 - SVA Other Other -592 794 691 1262 145 19 63 chr2 130037402 130037830 -120650024 - SVA Other Other -545 841 433 519 83 21 10 chr2 130037847 130037943 -120649911 - SVA Other Other -520 866 770 789 267 107 51 chr2 130038003 130038576 -120649278 - HAL1 LINE L1 -908 1599 995 380 303 41 8 chr2 130038582 130038704 -120649150 - HAL1 LINE L1 -1575 932 807 1754 216 16 23 chr2 130039007 130039391 -120648463 + MSTD LTR MaLR 16 396 0 323 284 84 0 chr2 130039421 130039516 -120648338 - MER94 DNA DNA -25 109 7 404 253 52 90 chr2 130039599 130039832 -120648022 - HAL1 LINE L1 -2266 241 18 221 330 57 0 chr2 130039992 130040098 -120647756 - L2 LINE L2 -18 3295 3184 3622 179 134 23 chr2 130040383 130041240 -120646614 - LTR28 LTR ERV1 -2 1018 3 1584 230 154 116 chr2 130041456 130041905 -120645949 - MLT1E2 LTR MaLR 0 626 173 2022 119 17 0 chr2 130041905 130042198 -120645656 + AluSg SINE Alu 1 298 -12 1584 230 154 116 chr2 130042198 130042378 -120645476 - MLT1E2 LTR MaLR -453 173 1 399 264 40 8 chr2 130042585 130042710 -120645144 + MER117 DNA MER1_type 31 159 -38 208 368 0 0 chr2 130043106 130043174 -120644680 - MIR SINE MIR -114 148 81 235 267 0 0 chr2 130043802 130043862 -120643992 - L1MB1 LINE L1 -1 6167 6108 395 283 132 6 chr2 130043873 130044032 -120643822 - L1MB1 LINE L1 -122 6067 5889 197 306 48 0 chr2 130045128 130045190 -120642664 + MIR SINE MIR 105 169 -93 * 222 324 115 20 chr2 130045180 130045328 -120642526 - MIR SINE MIR -53 209 48 456 192 0 0 chr2 130045405 130045504 -120642350 + (TG)n Simple_repeat Simple_repeat 1 99 0 766 205 47 5 chr2 130045642 130045832 -120642022 - L1MD2 LINE L1 -1 6618 6421 270 0 0 0 chr2 130045833 130045863 -120641991 + (TG)n Simple_repeat Simple_repeat 1 30 0 1718 208 114 14 chr2 130045865 130046355 -120641499 - LTR55 LTR ERV -8 540 2 195 162 0 0 chr2 130046357 130046394 -120641460 + (TG)n Simple_repeat Simple_repeat 2 38 0 9096 226 73 23 chr2 130046514 130050605 -120637249 - L1MD2 LINE L1 -249 6370 2078 3993 218 105 48 chr2 130050612 130051430 -120636424 - L1MD2 LINE L1 -4369 2037 1267 2055 104 4 0 chr2 130051430 130051709 -120636145 - AluSx SINE Alu -12 300 21 2114 110 0 0 chr2 130051716 130052007 -120635847 - AluSg SINE Alu -18 292 2 3993 218 105 48 chr2 130052007 130052018 -120635836 - L1MD2 LINE L1 -5144 1262 1253 1719 161 7 7 chr2 130052018 130052316 -120635538 - AluJb SINE Alu -14 298 1 3993 218 105 48 chr2 130052316 130053380 -120634474 - L1MD2 LINE L1 -5153 1253 34 944 242 178 50 chr2 130053573 130054079 -120633775 + MER39 LTR ERV1 1 707 0 180 209 15 164 chr2 130054085 130054152 -120633702 + MIR3 SINE MIR 125 181 -27 2216 92 20 0 chr2 130056097 130056402 -120631452 - AluSp SINE Alu -2 311 1 425 264 55 25 chr2 130056406 130056569 -120631285 - Charlie8 DNA MER1_type -2249 168 1 275 263 21 0 chr2 130056852 130056947 -120630907 + (TG)n Simple_repeat Simple_repeat 1 97 0 211 271 14 0 chr2 130056991 130057061 -120630793 + (TG)n Simple_repeat Simple_repeat 1 71 0 875 266 109 29 chr2 130057252 130057601 -120630253 + MLT1H1 LTR MaLR 177 553 -2 1135 219 107 39 chr2 130058078 130058443 -120629411 + MLT1B LTR MaLR 1 374 0 363 306 85 35 chr2 130060952 130061292 -120626562 + L1ME4a LINE L1 5727 6083 -38 4132 82 30 0 chr2 130061806 130062343 -120625511 - MER41A LTR ERV1 0 554 2 377 341 61 40 chr2 130063252 130063548 -120624306 + MLT1I LTR MaLR 2 303 -106 828 123 0 0 chr2 130063605 130063719 -120624135 - 5S rRNA rRNA 0 121 8 326 289 108 30 chr2 130063846 130064012 -120623842 - MIR3 SINE MIR -26 182 4 2125 109 3 7 chr2 130064363 130064667 -120623187 - AluSx SINE Alu -9 303 1 267 350 48 0 chr2 130064679 130064782 -120623072 - MIR SINE MIR -122 140 33 193 281 31 0 chr2 130064811 130064875 -120622979 + MIR SINE MIR 47 112 -150 305 295 116 0 chr2 130066535 130066647 -120621207 + MIR SINE MIR 25 149 -113 190 217 72 0 chr2 130066746 130066815 -120621039 + L2 LINE L2 2889 2962 -352 292 310 10 10 chr2 130066887 130066987 -120620867 + L2 LINE L2 3173 3272 -41 263 254 87 61 chr2 130067710 130067873 -120619981 + MIR SINE MIR 18 182 -63 190 314 57 0 chr2 130068778 130068848 -120619006 - MIR SINE MIR -71 191 118 318 336 32 0 chr2 130069346 130069471 -120618383 - MIR SINE MIR -45 217 89 1654 220 73 58 chr2 130071456 130072246 -120615608 + MER21B LTR ERV1 1 859 -4 285 257 14 0 chr2 130072363 130072507 -120615347 + GA-rich Low_complexity Low_complexity 1 146 0 1984 217 42 74 chr2 130072638 130073260 -120614594 + MER77 LTR ERV1 4 605 0 299 292 58 28 chr2 130073340 130073548 -120614306 - LTR33 LTR ERVL -10 511 311 2056 143 72 6 chr2 130073548 130073883 -120613971 + LTR18A LTR ERVL 1 357 0 299 292 58 28 chr2 130073883 130074018 -120613836 - LTR33 LTR ERVL -210 311 99 2862 141 11 7 chr2 130074355 130074810 -120613044 + LTR32 LTR ERVL 15 471 0 2215 107 0 3 chr2 130075004 130075294 -120612560 + AluSc SINE Alu 1 289 -20 1383 181 29 60 chr2 130075888 130076274 -120611580 + MLT1A2 LTR MaLR 1 374 0 316 311 67 0 chr2 130076332 130076487 -120611367 - L1ME LINE L1 -326 5844 5676 432 303 63 63 chr2 130076987 130077544 -120610310 + L1M4 LINE L1 2686 3242 -2904 1967 146 4 4 chr2 130077804 130078084 -120609770 + AluSq SINE Alu 1 280 -33 201 39 0 0 chr2 130078089 130078115 -120609739 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 678 283 69 24 chr2 130078417 130078707 -120609147 + L1M4c LINE L1 30 332 -6052 249 33 0 0 chr2 130078725 130078755 -120609099 + (A)n Simple_repeat Simple_repeat 1 30 0 735 195 36 196 chr2 130078788 130079100 -120608754 + L1M4c LINE L1 1919 2181 -4201 255 261 171 45 chr2 130079100 130079211 -120608643 + FLAM_C SINE Alu 9 133 0 735 195 36 196 chr2 130079211 130079505 -120608349 + L1M4c LINE L1 2181 2520 -3862 2239 104 3 7 chr2 130079505 130079804 -120608050 + AluSg SINE Alu 11 308 -2 2904 237 30 24 chr2 130079804 130080650 -120607204 + L1M4c LINE L1 2890 3729 -2653 2048 156 0 0 chr2 130080650 130080951 -120606903 + AluJb SINE Alu 1 301 -11 1822 80 30 0 chr2 130080961 130081224 -120606630 + L1PA14 LINE L1 5890 6160 -1 2904 237 30 24 chr2 130081224 130081331 -120606523 + L1M4c LINE L1 3737 3860 -2522 776 242 74 5 chr2 130081332 130081522 -120606332 - MLT1B LTR MaLR 0 390 188 201 39 0 0 chr2 130081542 130081568 -120606286 + (GA)n Simple_repeat Simple_repeat 1 26 0 359 143 0 0 chr2 130081569 130081625 -120606229 - MLT1B LTR MaLR -334 56 1 3573 231 83 17 chr2 130081626 130082701 -120605153 + L1M4c LINE L1 3858 5003 -1379 1186 148 138 122 chr2 130084344 130084687 -120603167 + LTR8A LTR ERV1 1 349 -378 3459 199 7 5 chr2 130084687 130085289 -120602565 - MER52A LTR ERV1 0 1755 1153 2978 206 58 48 chr2 130085282 130086138 -120601716 - MER52A LTR ERV1 -364 914 8 * 1623 151 85 52 chr2 130086161 130086526 -120601328 + LTR8A LTR ERV1 351 727 0 281 282 143 16 chr2 130087348 130087536 -120600318 + MIR SINE MIR 14 224 -38 185 255 39 20 chr2 130088641 130088692 -120599162 - MIR3 SINE MIR -14 194 143 306 309 54 93 chr2 130089905 130090109 -120597745 + L2 LINE L2 2950 3145 -127 2115 102 35 0 chr2 130090140 130090424 -120597430 - AluSg SINE Alu -14 296 3 229 196 22 0 chr2 130090737 130090783 -120597071 + CT-rich Low_complexity Low_complexity 1 47 0 225 0 0 0 chr2 130090794 130090819 -120597035 + (TGGGGG)n Simple_repeat Simple_repeat 4 28 0 1346 164 14 8 chr2 130093270 130093661 -120594193 - LTR47B LTR ERVL 0 443 1 290 313 85 45 chr2 130094795 130094971 -120592883 + MIR SINE MIR 13 195 -67 333 203 41 49 chr2 130096796 130096919 -120590935 + L1ME4a LINE L1 5788 5909 -212 2045 125 11 0 chr2 130097079 130097382 -120590472 - AluSx SINE Alu 0 306 1 357 292 199 0 chr2 130097788 130097959 -120589895 + MIR SINE MIR 40 244 -18 384 296 77 44 chr2 130098144 130098377 -120589477 + L1MCa LINE L1 1835 2171 -4389 9944 225 73 38 chr2 130098418 130099979 -120587875 + L1MB8 LINE L1 2085 3591 -2863 2061 125 7 0 chr2 130099979 130100295 -120587559 + AluSx SINE Alu 1 318 0 9944 225 73 38 chr2 130100295 130100882 -120586972 + L1MB8 LINE L1 3591 4156 -2298 2435 84 3 0 chr2 130100882 130101180 -120586674 - AluSp SINE Alu -14 299 1 9944 225 73 38 chr2 130101180 130102609 -120585245 + L1MB8 LINE L1 4156 5747 -707 2236 197 69 17 chr2 130102613 130103147 -120584707 + L1MB8 LINE L1 5896 6457 -1 353 109 36 0 chr2 130103165 130103220 -120584634 - Alu SINE Alu -10 290 234 2100 108 0 4 chr2 130103220 130103488 -120584366 - AluSx SINE Alu -45 267 1 587 228 43 25 chr2 130103786 130103948 -120583906 + MER63 DNA MER1_type 458 622 -438 1009 90 0 0 chr2 130103968 130104090 -120583764 - AluSg SINE Alu -188 122 1 1180 240 38 0 chr2 130104149 130104441 -120583413 + MER63 DNA MER1_type 685 987 -74 247 223 85 43 chr2 130104484 130104578 -120583276 + MIR SINE MIR 85 182 -80 186 333 0 0 chr2 130105256 130105319 -120582535 + MIR SINE MIR 117 179 -83 198 274 59 20 chr2 130105506 130105608 -120582246 - MIR SINE MIR -125 137 32 227 319 168 0 chr2 130105665 130105784 -120582070 + L2 LINE L2 3093 3231 -82 894 254 12 44 chr2 130105818 130106070 -120581784 + MIR SINE MIR 8 251 -11 786 222 58 113 chr2 130106097 130106408 -120581446 - MLT1J LTR MaLR -156 294 1 291 301 130 55 chr2 130106975 130107124 -120580730 + L1MC4a LINE L1 5298 5434 -2374 642 147 16 16 chr2 130107124 130107253 -120580601 - L1MC1 LINE L1 -1 6332 6204 291 301 130 55 chr2 130107253 130107718 -120580136 + L1MC4a LINE L1 5434 5958 -1850 194 208 156 0 chr2 130108147 130108224 -120579630 + L2 LINE L2 1884 1972 -1342 1169 189 64 73 chr2 130108580 130109034 -120578820 + LTR7 LTR ERV1 1 450 0 207 291 121 44 chr2 130109374 130109580 -120578274 + L2 LINE L2 2210 2431 -883 344 358 40 0 chr2 130109609 130109782 -120578072 + MIR SINE MIR 83 262 0 1308 227 55 2 chr2 130111061 130111409 -120576445 + MLT1A2 LTR MaLR 6 467 0 216 208 0 42 chr2 130111447 130111519 -120576335 + CT-rich Low_complexity Low_complexity 1 69 0 284 269 100 8 chr2 130112603 130112733 -120575121 + MIR SINE MIR 30 171 -91 331 255 160 0 chr2 130112877 130112983 -120574871 - MIR SINE MIR -108 154 32 243 213 0 0 chr2 130113047 130113094 -120574760 + MIR SINE MIR 108 154 -108 1527 153 107 3 chr2 130114016 130114148 -120573706 - MER46B DNA MER2_type -2495 236 119 2431 93 3 0 chr2 130114148 130114449 -120573405 - AluSp SINE Alu -11 302 1 1527 153 107 3 chr2 130114449 130114643 -120573211 - MER46B DNA MER2_type -2612 119 1 1387 228 133 36 chr2 130114788 130115262 -120572592 + MLT2B1 LTR ERVL 1 520 0 712 260 126 54 chr2 130117647 130118020 -120569834 - MLT1I LTR MaLR -2 407 8 201 250 19 0 chr2 130119019 130119071 -120568783 - MIR SINE MIR -114 148 96 2204 128 0 16 chr2 130119328 130119634 -120568220 - AluSx SINE Alu -7 305 5 432 271 51 0 chr2 130120291 130120409 -120567445 - MER63 DNA MER1_type -312 750 1 389 258 97 24 chr2 130121982 130122106 -120565748 - MIR SINE MIR -116 146 14 247 252 78 10 chr2 130123840 130123943 -120563911 + MIR SINE MIR 30 139 -69 1556 263 115 17 chr2 130125145 130126039 -120561815 - L2 LINE L2 -40 3273 2294 500 304 51 47 chr2 130126554 130126761 -120561093 - L1M4 LINE L1 -786 5360 5155 2002 117 28 3 chr2 130126761 130127073 -120560781 + AluSx SINE Alu 7 312 0 500 304 51 47 chr2 130127073 130127315 -120560539 - L1M4 LINE L1 -991 5155 4909 410 202 101 34 chr2 130127335 130127454 -120560400 - FLAM_C SINE Alu 0 133 7 502 258 91 133 chr2 130127497 130128442 -120559412 - L1M4 LINE L1 -1299 4847 3943 25 0 0 0 chr2 130128465 130128490 -120559364 + AT_rich Low_complexity Low_complexity 1 25 0 1368 115 0 0 chr2 130128492 130128666 -120559188 - AluSq SINE Alu -139 174 1 505 317 57 27 chr2 130128667 130129033 -120558821 - L1M4 LINE L1 -2244 3902 3526 1251 193 0 10 chr2 130129088 130129295 -120558559 - AluJo SINE Alu -107 205 1 359 278 83 0 chr2 130129630 130129763 -120558091 + L2 LINE L2 1603 1746 -1568 2179 159 34 5 chr2 130130133 130130549 -120557305 - MSTA LTR MaLR 0 428 1 706 310 25 7 chr2 130132249 130132523 -120555331 + L2 LINE L2 2295 2573 -741 321 259 42 70 chr2 130132512 130132655 -120555199 + L2 LINE L2 3173 3311 -2 * 286 285 227 17 chr2 130132873 130133045 -120554809 + L2 LINE L2 2549 2756 -558 352 354 4 39 chr2 130133288 130133517 -120554337 + L2 LINE L2 2189 2409 -905 1891 240 73 65 chr2 130133596 130133637 -120554217 - MER97a DNA MER1_type? 0 894 855 2136 117 7 0 chr2 130133637 130133935 -120553919 - AluSg SINE Alu -10 300 1 1891 240 73 65 chr2 130133935 130133962 -120553892 - MER97a DNA MER1_type? -39 855 830 885 232 123 24 chr2 130133962 130134294 -120553560 + MLT1A1 LTR MaLR 1 365 0 1891 240 73 65 chr2 130134294 130134436 -120553418 - MER97a DNA MER1_type? -64 830 691 2503 61 7 0 chr2 130134436 130134733 -120553121 - AluSq SINE Alu -13 300 2 1891 240 73 65 chr2 130134733 130134928 -120552926 - MER97a DNA MER1_type? -203 691 499 1313 161 187 22 chr2 130134928 130135195 -120552659 - AluJo SINE Alu -1 311 1 1891 240 73 65 chr2 130135195 130135666 -120552188 - MER97a DNA MER1_type? -395 499 8 216 298 0 0 chr2 130135675 130135759 -120552095 + L2 LINE L2 2542 2625 -689 528 92 10 41 chr2 130135761 130135859 -120551995 + MLT1B LTR MaLR 1 95 -295 24 0 0 0 chr2 130136431 130136455 -120551399 + AT_rich Low_complexity Low_complexity 1 24 0 183 306 14 14 chr2 130136624 130136696 -120551158 + MIR3 SINE MIR 99 170 -38 1010 201 25 4 chr2 130137836 130138085 -120549769 + MLT1B LTR MaLR 79 410 -57 295 234 117 25 chr2 130138268 130138465 -120549389 + L2 LINE L2 2834 3048 -265 959 271 110 32 chr2 130140885 130141383 -120546471 - L1M1 LINE L1 -421 5749 5270 360 314 106 32 chr2 130141783 130142095 -120545759 - HAL1 LINE L1 -6 2501 2167 318 257 193 57 chr2 130142497 130142637 -120545217 - HAL1 LINE L1 -328 2179 2021 975 269 73 98 chr2 130142637 130143117 -120544737 - HAL1 LINE L1 -418 2089 1631 2086 165 23 16 chr2 130143117 130143504 -120544350 + MLT1B LTR MaLR 1 390 0 975 269 73 98 chr2 130143504 130143725 -120544129 - HAL1 LINE L1 -876 1631 1406 1892 157 3 7 chr2 130143732 130144026 -120543828 + AluJo SINE Alu 1 293 -19 180 219 156 0 chr2 130144866 130144994 -120542860 + L2 LINE L2 2822 2969 -345 2497 69 0 0 chr2 130145986 130146275 -120541579 + AluY SINE Alu 1 292 -19 348 24 0 0 chr2 130146275 130146316 -120541538 + (CA)n Simple_repeat Simple_repeat 2 42 0 2497 69 0 0 chr2 130146316 130146329 -120541525 + AluY SINE Alu 291 303 -8 618 299 56 13 chr2 130146568 130146799 -120541055 + LTR16C LTR ERVL 101 341 -150 * 791 230 36 10 chr2 130146782 130146978 -120540876 + MER63A DNA MER1_type 7 207 -3 392 268 49 0 chr2 130147003 130147126 -120540728 + LTR16C LTR ERVL 363 491 0 294 319 126 0 chr2 130147135 130147270 -120540584 - MIR3 SINE MIR -27 181 30 2465 94 10 0 chr2 130148161 130148470 -120539384 + AluSp SINE Alu 1 312 -1 530 217 28 42 chr2 130149229 130149372 -120538482 - MIR SINE MIR -113 149 9 4352 174 19 42 chr2 130149488 130150216 -120537638 + L1MA9 LINE L1 4610 5354 -958 1852 118 94 14 chr2 130150216 130150504 -120537350 + AluSx SINE Alu 2 312 0 4352 174 19 42 chr2 130150504 130151003 -120536851 + L1MA9 LINE L1 5354 5796 -516 303 28 0 0 chr2 130151003 130151039 -120536815 + (CA)n Simple_repeat Simple_repeat 1 36 0 4352 174 19 42 chr2 130151039 130151410 -120536444 + L1MA9 LINE L1 5796 6174 -138 648 223 40 36 chr2 130151409 130151633 -120536221 + L1ME2 LINE L1 5860 6084 -80 * 287 227 10 72 chr2 130151559 130151634 -120536220 + L1MA10 LINE L1 6175 6244 -90 * 2727 136 82 42 chr2 130151634 130152206 -120535648 + LTR49 LTR ERV1 1 595 0 287 227 10 72 chr2 130152206 130152227 -120535627 + L1MA10 LINE L1 6244 6265 -69 299 246 33 99 chr2 130152242 130152453 -120535401 - HAL1 LINE L1 -113 2394 2198 306 227 13 13 chr2 130152457 130152532 -120535322 + Tigger7 DNA MER2_type 2 76 -2411 1144 188 145 4 chr2 130152538 130152772 -120535082 - Tigger7 DNA MER2_type -2145 342 76 1037 142 15 41 chr2 130152770 130152967 -120534887 + Tigger7 DNA MER2_type 2143 2334 -153 * 470 203 43 80 chr2 130152971 130153008 -120534846 + LTR23 LTR ERV1 11 48 -389 2521 79 0 0 chr2 130153008 130153312 -120534542 + AluSx SINE Alu 2 305 -7 470 203 43 80 chr2 130153312 130153412 -120534442 + LTR23 LTR ERV1 48 143 -294 1245 143 116 19 chr2 130153488 130153746 -120534108 + LTR23 LTR ERV1 155 437 0 1578 143 0 9 chr2 130154447 130154678 -120533176 + AluSc SINE Alu 71 299 -10 8134 171 23 46 chr2 130155032 130155290 -120532564 + LTR49-int LTR ERV1 1557 1819 -4512 2083 104 0 0 chr2 130155290 130155558 -120532296 - AluSq SINE Alu -7 306 39 8134 171 23 46 chr2 130155558 130157054 -120530800 + LTR49-int LTR ERV1 1819 3272 -3059 1734 203 51 106 chr2 130157106 130157483 -120530371 + LTR49-int LTR ERV1 3264 3585 -2746 2374 107 0 0 chr2 130157483 130157791 -120530063 + AluSc SINE Alu 1 308 -1 1734 203 51 106 chr2 130157791 130158119 -120529735 + LTR49-int LTR ERV1 3585 3930 -2401 268 204 19 0 chr2 130158111 130158165 -120529689 + LTR49-int LTR ERV1 4430 4484 -1847 * 1861 111 12 0 chr2 130158347 130158599 -120529255 + AluSx SINE Alu 40 294 -18 1346 109 0 0 chr2 130159606 130159780 -120528074 - AluSc SINE Alu -21 288 115 984 117 0 0 chr2 130159833 130159961 -120527893 - AluSc SINE Alu -179 130 3 1408 156 87 139 chr2 130160010 130160471 -120527383 + LTR23 LTR ERV1 1 437 0 2340 102 3 3 chr2 130160477 130160781 -120527073 - AluSx SINE Alu -8 304 1 961 132 13 6 chr2 130160812 130160971 -120526883 + Tigger7 DNA MER2_type 2331 2490 -1 654 271 158 39 chr2 130160971 130161439 -120526415 - HAL1 LINE L1 -320 2187 1664 1450 259 96 20 chr2 130161494 130162107 -120525747 - HAL1 LINE L1 -627 1880 1221 324 309 134 19 chr2 130162113 130162471 -120525383 - LTR16A1 LTR ERVL 0 457 83 528 254 46 29 chr2 130162607 130162887 -120524967 - HAL1 LINE L1 -1322 1185 901 661 269 159 70 chr2 130163049 130163651 -120524203 - HAL1 LINE L1 -1851 656 1 186 120 160 20 chr2 130164060 130164110 -120523744 - MIR SINE MIR -79 183 127 238 364 111 41 chr2 130164401 130164788 -120523066 + L3 LINE CR1 326 739 -838 720 194 20 0 chr2 130165088 130165444 -120522410 + (TCCA)n Simple_repeat Simple_repeat 1 363 0 207 250 23 0 chr2 130165445 130165489 -120522365 + (CCCA)n Simple_repeat Simple_repeat 4 48 0 826 177 14 0 chr2 130165489 130165993 -120521861 + (TCCA)n Simple_repeat Simple_repeat 1 511 0 384 200 0 0 chr2 130166016 130166096 -120521758 + (CCCA)n Simple_repeat Simple_repeat 3 82 0 302 312 39 0 chr2 130166123 130166200 -120521654 - L2 LINE L2 -42 3230 3151 210 256 12 37 chr2 130167869 130167951 -120519903 + MIR SINE MIR 59 138 -124 253 188 0 62 chr2 130168840 130168904 -120518950 + C-rich Low_complexity Low_complexity 4 63 0 530 196 19 0 chr2 130169278 130169385 -120518469 - MER67B LTR ERV1 -1 660 552 203 200 12 100 chr2 130171049 130171129 -120516725 + MER5A DNA MER1_type 81 153 -36 197 238 200 0 chr2 130171630 130171710 -120516144 + MIR SINE MIR 46 141 -67 212 178 82 27 chr2 130172092 130172165 -120515689 + MIR SINE MIR 90 166 -96 509 218 190 51 chr2 130173062 130173313 -120514541 - MLT1D LTR MaLR -181 324 45 195 283 66 10 chr2 130173358 130173471 -120514383 + MIR SINE MIR 6 130 -78 278 172 293 20 chr2 130173758 130173857 -120513997 - LTR16A LTR ERVL -3 447 322 337 303 10 82 chr2 130174030 130174225 -120513629 + L2 LINE L2 2899 3079 -193 2020 161 31 3 chr2 130174889 130175244 -120512610 + MLT1A1 LTR MaLR 1 365 0 251 362 36 22 chr2 130175269 130175407 -120512447 - MER5A DNA MER1_type -26 163 24 411 274 25 9 chr2 130175592 130175754 -120512100 - MIR SINE MIR -70 138 5 622 267 190 25 chr2 130176131 130176457 -120511397 - L1ME4a LINE L1 -28 6093 5714 245 297 0 0 chr2 130176542 130176606 -120511248 - L1ME4a LINE L1 -521 5600 5537 713 284 129 26 chr2 130177881 130178230 -120509624 - L2 LINE L2 -6 3307 2923 519 255 142 43 chr2 130178364 130178689 -120509165 - L2 LINE L2 -667 2647 2291 216 284 164 73 chr2 130178692 130178967 -120508887 - L2 LINE L2 -1855 1459 1160 585 332 22 4 chr2 130179043 130179272 -120508582 + L2 LINE L2 2655 2887 -427 295 299 67 37 chr2 130179374 130179508 -120508346 + L2 LINE L2 3092 3229 -84 760 347 69 40 chr2 130179595 130179667 -120508187 + L1MC4a LINE L1 4456 4524 -1622 2448 81 3 0 chr2 130179667 130179964 -120507890 - AluSp SINE Alu -15 298 1 760 347 69 40 chr2 130179964 130180542 -120507312 + L1MC4a LINE L1 4524 5125 -1021 783 322 58 36 chr2 130180674 130181292 -120506562 + L1MC4a LINE L1 5286 5917 -1891 2368 96 0 25 chr2 130182361 130182675 -120505179 - AluSx SINE Alu -6 306 1 464 315 66 30 chr2 130182774 130183136 -120504718 + HERVL LTR ERVL 4506 4880 -774 597 273 129 14 chr2 130183255 130183464 -120504390 + HERVL LTR ERVL 5100 5332 -432 332 267 44 22 chr2 130183889 130183979 -120503875 + MLT2E LTR ERVL 40 131 -497 457 291 76 9 chr2 130184371 130184594 -120503260 + Charlie7 DNA MER1_type 320 557 -2055 1877 139 4 0 chr2 130184637 130184896 -120502958 + AluSx SINE Alu 38 297 -15 34 24 0 0 chr2 130184897 130184938 -120502916 + AT_rich Low_complexity Low_complexity 1 41 0 407 307 143 26 chr2 130185135 130185324 -120502530 - L1M4 LINE L1 -1768 4378 4168 699 295 117 78 chr2 130185330 130185644 -120502210 + L1 LINE L1 3520 3820 -2326 2043 145 0 0 chr2 130185644 130185933 -120501921 + AluJb SINE Alu 1 289 -23 699 295 117 78 chr2 130185933 130186197 -120501657 + L1 LINE L1 3820 4121 -2025 365 389 42 16 chr2 130186226 130186419 -120501435 + L1 LINE L1 4093 4290 -1856 300 336 25 25 chr2 130186482 130186604 -120501250 - L1M4 LINE L1 -2699 3447 3326 345 288 51 45 chr2 130186627 130186804 -120501050 + LTR33 LTR ERVL 1 178 -343 251 313 18 0 chr2 130186860 130186972 -120500882 + LTR33 LTR ERVL 333 446 -75 636 183 0 106 chr2 130187575 130187681 -120500173 - L1MA9 LINE L1 0 6312 6231 2642 52 7 0 chr2 130187681 130187990 -120499864 + AluY SINE Alu 1 311 0 636 183 0 106 chr2 130187990 130188063 -120499791 - L1MA9 LINE L1 -81 6231 6152 * 1875 155 22 0 chr2 130188057 130188379 -120499475 - L1MA9 LINE L1 -519 5793 5465 397 272 61 110 chr2 130188486 130188960 -120498894 - HAL1b LINE L1 -897 451 1 445 309 39 29 chr2 130189140 130189344 -120498510 - L1MC4 LINE L1 -1 8041 7836 6923 189 18 21 chr2 130189534 130190837 -120497017 - HSMAR2 DNA Mariner -1 1301 2 2142 131 3 3 chr2 130190901 130191199 -120496655 + AluSx SINE Alu 1 298 -14 302 298 0 0 chr2 130192132 130192236 -120495618 + L1ME LINE L1 5293 5396 -907 296 260 114 16 chr2 130192491 130192614 -120495240 + L1ME LINE L1 5703 5837 -333 409 252 18 9 chr2 130193393 130193504 -120494350 + MIR3 SINE MIR 81 192 -16 454 228 192 18 chr2 130193816 130193892 -120493962 - L1ME4a LINE L1 0 6121 6060 2102 138 3 0 chr2 130193892 130194196 -120493658 + AluSq SINE Alu 7 311 -2 454 228 192 18 chr2 130194196 130194286 -120493568 - L1ME4a LINE L1 -61 6060 5926 1072 72 0 0 chr2 130194668 130194793 -120493061 - AluSp/q SINE Alu -25 288 164 603 210 17 0 chr2 130194916 130195092 -120492762 + (CAT)n Simple_repeat Simple_repeat 2 180 0 235 212 24 0 chr2 130195121 130195206 -120492648 + (CAT)n Simple_repeat Simple_repeat 1 87 0 427 227 85 21 chr2 130195218 130195359 -120492495 - MIR SINE MIR -48 214 65 198 0 0 0 chr2 130197096 130197118 -120490736 + (CA)n Simple_repeat Simple_repeat 1 22 0 205 277 31 0 chr2 130197774 130197839 -120490015 - L2 LINE L2 0 3272 3206 598 265 29 0 chr2 130199183 130199353 -120488501 - MER45A DNA AcHobo -3 175 1 244 217 264 9 chr2 130200256 130200362 -120487492 - L1ME4a LINE L1 -34 6087 5955 2163 96 3 14 chr2 130200375 130200666 -120487188 - AluSc SINE Alu -21 288 1 1134 214 82 6 chr2 130200695 130201012 -120486842 - MER2 DNA MER2_type -3 341 1 484 280 32 0 chr2 130201175 130201300 -120486554 + MIR SINE MIR 76 204 -58 332 274 101 58 chr2 130201429 130201776 -120486078 + LTR16A1 LTR ERVL 94 455 -2 691 261 74 0 chr2 130201780 130201995 -120485859 - MLT1D LTR MaLR 0 505 275 841 210 91 54 chr2 130202442 130202718 -120485136 - MLT1D LTR MaLR -217 288 3 591 250 188 15 chr2 130202966 130203306 -120484548 + L2 LINE L2 2869 3267 -46 201 39 0 0 chr2 130203334 130203360 -120484494 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 451 249 123 53 chr2 130204547 130204990 -120482864 - L2 LINE L2 -302 3011 2489 2290 84 35 0 chr2 130205731 130206018 -120481836 - AluSx SINE Alu -15 297 1 348 303 54 5 chr2 130206234 130206419 -120481435 - HAL1 LINE L1 -701 1806 1613 229 284 57 40 chr2 130206737 130206913 -120480941 - HAL1 LINE L1 -1358 1149 971 2256 94 13 7 chr2 130206944 130207242 -120480612 + AluSp SINE Alu 1 300 -13 351 285 108 76 chr2 130207967 130208522 -120479332 + L2 LINE L2 2076 2648 -666 719 254 77 18 chr2 130208726 130208998 -120478856 + MLT1L LTR MaLR 4 291 -324 1154 192 147 95 chr2 130209890 130210353 -120477501 + MLT1D LTR MaLR 1 487 -18 710 206 25 69 chr2 130210353 130210557 -120477297 + MER77 LTR ERV1 1 195 -410 1768 204 27 5 chr2 130210573 130210946 -120476908 - MLT1B LTR MaLR -7 383 3 1279 238 107 16 chr2 130210975 130211349 -120476505 + MER77 LTR ERV1 196 603 -2 41775 31 22 1 chr2 130211637 130217661 -120470193 + L1HS LINE L1 5 6155 0 22 0 0 0 chr2 130217661 130217683 -120470171 + AT_rich Low_complexity Low_complexity 1 22 0 6421 62 1 1 chr2 130217683 130218558 -120469296 + L1PA6 LINE L1 5293 6167 0 1981 157 135 0 chr2 130219137 130219514 -120468340 + MSTA LTR MaLR 1 428 0 2589 61 0 13 chr2 130219818 130220128 -120467726 + AluY SINE Alu 1 306 -5 2353 156 21 7 chr2 130221081 130221504 -120466350 + MSTB1 LTR MaLR 1 429 -3 342 258 13 7 chr2 130221943 130222098 -120465756 + (CA)n Simple_repeat Simple_repeat 1 156 0 2434 95 13 0 chr2 130222173 130222479 -120465375 - AluSx SINE Alu -2 310 1 1571 212 19 28 chr2 130223360 130223407 -120464447 + MLT1A1 LTR MaLR 10 56 -309 2168 120 23 0 chr2 130223407 130223706 -120464148 + AluSx SINE Alu 1 306 -6 1571 212 19 28 chr2 130223706 130224017 -120463837 + MLT1A1 LTR MaLR 56 365 0 303 224 0 0 chr2 130224038 130224096 -120463758 + MSTB LTR MaLR 52 109 -317 2769 163 109 33 chr2 130224334 130224910 -120462944 + MER31A-int LTR ERV1 4297 4916 -20 2545 179 6 14 chr2 130224910 130225396 -120462458 + MER31A LTR ERV1 1 482 -3 921 238 154 17 chr2 130225409 130225868 -120461986 - MLT1G1 LTR MaLR -47 497 1 190 296 14 28 chr2 130225885 130225956 -120461898 - L2 LINE L2 -3 3269 3200 417 116 0 0 chr2 130226256 130226325 -120461529 + (TC)n Simple_repeat Simple_repeat 1 69 0 190 273 106 0 chr2 130226366 130226432 -120461422 - L2 LINE L2 -31 3241 3169 571 260 17 12 chr2 130226739 130226912 -120460942 - Charlie4 DNA MER1_type -20 1941 1768 513 118 24 24 chr2 130227583 130227710 -120460144 + (CA)n Simple_repeat Simple_repeat 1 127 0 300 250 79 49 chr2 130228751 130229005 -120458849 - MLT1G1 LTR MaLR -360 230 11 354 297 51 0 chr2 130229065 130229183 -120458671 + L2 LINE L2 1094 1217 -2097 180 111 0 0 chr2 130230099 130230126 -120457728 + (AGGGGG)n Simple_repeat Simple_repeat 4 30 0 414 57 0 0 chr2 130231663 130231716 -120456138 + (TCCC)n Simple_repeat Simple_repeat 4 56 0 2092 104 0 0 chr2 130231721 130232000 -120455854 - AluSq SINE Alu -34 279 1 926 221 42 117 chr2 130233033 130233312 -120454542 + MLT2C2 LTR ERVL 1 299 -165 387 0 0 0 chr2 130233312 130233355 -120454499 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 1718 129 4 0 chr2 130233359 130233614 -120454240 - AluSq SINE Alu -51 262 7 926 221 42 117 chr2 130233614 130233823 -120454031 + MLT2C2 LTR ERVL 302 457 -7 288 290 206 13 chr2 130233823 130233978 -120453876 + MIR SINE MIR 1 185 -77 225 348 56 0 chr2 130234072 130234161 -120453693 - L2 LINE L2 -27 3245 3152 383 297 145 32 chr2 130235100 130235541 -120452313 + L2 LINE L2 1419 1909 -1405 238 261 117 9 chr2 130235744 130235855 -120451999 - L1M4 LINE L1 -1459 4687 4565 249 281 31 45 chr2 130236107 130236331 -120451523 - L1M4 LINE L1 -2901 3245 3025 3129 236 42 37 chr2 130236388 130237297 -120450557 - L1ME1 LINE L1 -6 6160 5257 2068 105 0 3 chr2 130237297 130237592 -120450262 + AluSx SINE Alu 1 294 -18 3129 236 42 37 chr2 130237592 130238505 -120449349 - L1ME1 LINE L1 -909 5257 4329 527 184 0 7 chr2 130238922 130239074 -120448780 + CT-rich Low_complexity Low_complexity 1 151 0 1936 94 50 7 chr2 130239083 130239360 -120448494 - AluSc SINE Alu -20 289 1 2193 104 3 0 chr2 130240326 130240634 -120447220 + AluSg SINE Alu 1 309 -1 269 226 71 93 chr2 130240691 130240853 -120447001 + MIR SINE MIR 11 170 -67 1558 251 50 36 chr2 130241338 130241836 -120446018 + MLT1D LTR MaLR 1 505 0 595 293 55 39 chr2 130242351 130242662 -120445192 + MER65B LTR ERV1 205 520 -11 214 188 47 31 chr2 130242714 130242778 -120445076 + MIR SINE MIR 88 152 -56 329 231 100 39 chr2 130244355 130244485 -120443369 - MIR SINE MIR -113 149 12 1112 239 75 38 chr2 130244491 130244863 -120442991 + MLT1B LTR MaLR 1 386 -4 236 345 123 25 chr2 130245318 130245521 -120442333 + MIR SINE MIR 34 256 -6 345 268 45 36 chr2 130245865 130245977 -120441877 + LTR33 LTR ERVL 85 218 -303 639 280 72 5 chr2 130246158 130246365 -120441489 + LTR33A LTR ERVL 299 519 -4 481 258 8 8 chr2 130247766 130248024 -120439830 + CT-rich Low_complexity Low_complexity 1 258 0 549 194 0 0 chr2 130248379 130248477 -120439377 + MER4A LTR ERV1 1 98 -566 1713 136 51 8 chr2 130248477 130248808 -120439046 + MER4A LTR ERV1 261 664 0 198 268 14 14 chr2 130248838 130248909 -120438945 - L2 LINE L2 -519 2795 2725 346 218 101 34 chr2 130249115 130249252 -120438602 - MIR SINE MIR -63 145 47 416 262 83 24 chr2 130249725 130249893 -120437961 - MIR SINE MIR -36 226 49 205 284 78 29 chr2 130250055 130250157 -120437697 + L2 LINE L2 3137 3243 -29 3672 224 68 33 chr2 130250939 130251178 -120436676 - L1MD1 LINE L1 -228 6408 6179 2104 112 3 0 chr2 130251178 130251483 -120436371 - AluY SINE Alu -5 306 1 3672 224 68 33 chr2 130251483 130252195 -120435659 - L1MD1 LINE L1 -457 6179 5493 2065 95 46 20 chr2 130252195 130252499 -120435355 - AluSx SINE Alu 0 312 1 3672 224 68 33 chr2 130252499 130253174 -120434680 - L1MD1 LINE L1 -1143 5493 4843 7702 123 24 10 chr2 130253174 130254388 -120433466 + Tigger3b DNA MER2_type 1 1231 0 3672 224 68 33 chr2 130254388 130255238 -120432616 - L1MD1 LINE L1 -1793 4843 3705 240 86 0 0 chr2 130255238 130255273 -120432581 + (TATTG)n Simple_repeat Simple_repeat 3 37 0 3672 224 68 33 chr2 130255273 130255496 -120432358 - L1MD1 LINE L1 -2931 3705 3491 * 7956 224 71 23 chr2 130255469 130257013 -120430841 - L1MD1 LINE L1 -3316 3224 1754 2096 136 0 0 chr2 130257013 130257322 -120430532 - AluSp SINE Alu -4 309 1 7956 224 71 23 chr2 130257322 130257453 -120430401 - L1MD1 LINE L1 -4786 1754 1631 2307 141 39 53 chr2 130257453 130257816 -120430038 + MSTA LTR MaLR 1 359 -69 2251 102 0 0 chr2 130257816 130258129 -120429725 - AluSq SINE Alu 0 313 1 2307 141 39 53 chr2 130258129 130258199 -120429655 + MSTA LTR MaLR 359 428 0 7956 224 71 23 chr2 130258199 130259335 -120428519 - L1MD1 LINE L1 -4909 1631 277 191 81 54 0 chr2 130259347 130259384 -120428470 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 273 309 0 0 chr2 130259407 130259488 -120428366 - L1MD1 LINE L1 -6287 253 173 237 201 168 36 chr2 130259553 130259643 -120428211 + MER58B DNA MER1_type 113 341 0 1431 278 77 44 chr2 130259655 130259940 -120427914 - L1MCc LINE L1 -4459 2520 2246 2043 133 3 3 chr2 130259940 130260248 -120427606 - AluSx SINE Alu -4 308 1 1431 278 77 44 chr2 130260248 130261210 -120426644 - L1MCc LINE L1 -4733 2246 1086 461 267 57 17 chr2 130261301 130261477 -120426377 - L1MCc LINE L1 -6227 196 14 311 288 38 30 chr2 130261532 130261664 -120426190 + MIR SINE MIR 96 228 -34 549 364 103 37 chr2 130261929 130262640 -120425214 - L3 LINE CR1 -137 1440 683 363 262 85 43 chr2 130263950 130264091 -120423763 - L2 LINE L2 -8 3264 3118 281 370 33 11 chr2 130265039 130265223 -120422631 + L2 LINE L2 1735 1922 -1392 204 288 41 0 chr2 130265479 130265552 -120422302 + MIR SINE MIR 59 134 -128 301 327 26 0 chr2 130266050 130266163 -120421691 - L2 LINE L2 -1 3312 3197 299 316 64 18 chr2 130266596 130266767 -120421087 - MLT1L LTR MaLR -78 537 359 24 0 0 0 chr2 130267290 130267314 -120420540 + AT_rich Low_complexity Low_complexity 1 24 0 654 109 0 0 chr2 130267421 130267522 -120420332 + (TCCCC)n Simple_repeat Simple_repeat 4 104 0 1903 126 0 20 chr2 130268029 130268323 -120419531 - AluSx SINE Alu -8 304 17 3767 213 58 83 chr2 130269444 130270874 -120416980 - L1MEc LINE L1 -1328 4887 3494 1594 226 46 6 chr2 130270976 130271326 -120416528 - MLT1C LTR MaLR -45 422 59 1991 196 51 160 chr2 130271371 130272953 -120414901 - L1MEc LINE L1 -2792 3423 2047 4336 110 14 71 chr2 130272954 130273729 -120414125 - Tigger3(Golem) DNA MER2_type -1 3028 2298 679 204 0 0 chr2 130273744 130273857 -120413997 - Tigger3(Golem) DNA MER2_type -2916 113 1 414 204 11 0 chr2 130273873 130273961 -120413893 + MER96 DNA MER1_type? 87 175 0 2370 252 74 46 chr2 130273962 130274242 -120413612 - L1MEc LINE L1 -5465 931 660 2317 74 6 22 chr2 130274242 130274553 -120413301 - AluY SINE Alu -4 307 2 2370 252 74 46 chr2 130274553 130275012 -120412842 - L1MEc LINE L1 -5736 660 215 2294 163 72 12 chr2 130275012 130275417 -120412437 - MSTB1 LTR MaLR 0 432 4 2370 252 74 46 chr2 130275417 130275472 -120412382 - L1MEc LINE L1 -6181 215 163 315 0 0 0 chr2 130275472 130275507 -120412347 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2160 104 7 0 chr2 130275509 130275787 -120412067 - AluSq SINE Alu -32 281 2 2370 252 74 46 chr2 130275787 130275852 -120412002 - L1MEc LINE L1 -6233 163 50 1941 201 15 50 chr2 130276414 130276872 -120410982 + LTR47B LTR ERVL 2 443 0 1281 197 60 76 chr2 130277430 130277800 -120410054 + MLT1A1 LTR MaLR 1 364 -1 367 219 70 91 chr2 130277932 130278119 -120409735 - L2 LINE L2 -47 3266 3084 187 269 77 64 chr2 130280036 130280114 -120407740 + L2 LINE L2 3193 3271 -1 457 274 42 57 chr2 130280170 130280303 -120407551 + HAL1 LINE L1 10 140 -2367 3180 150 6 14 chr2 130280303 130280823 -120407031 + L1PA15 LINE L1 5644 6159 -6 457 274 42 57 chr2 130280823 130280901 -120406953 + HAL1 LINE L1 140 218 -2289 288 296 78 39 chr2 130282464 130282643 -120405211 + L2 LINE L2 3083 3268 -45 212 262 49 0 chr2 130282870 130282931 -120404923 + MIR SINE MIR 103 166 -96 229 211 211 74 chr2 130285466 130285561 -120402293 + MIR SINE MIR 8 115 -147 195 204 0 0 chr2 130285575 130285619 -120402235 + (CACCAT)n Simple_repeat Simple_repeat 4 47 0 652 212 6 11 chr2 130285633 130285812 -120402042 + (CAT)n Simple_repeat Simple_repeat 2 179 0 264 332 192 5 chr2 130286536 130286698 -120401156 - L2 LINE L2 -837 2477 2264 2777 129 57 0 chr2 130286698 130287140 -120400714 - LTR24 LTR ERV1 0 467 1 264 332 192 5 chr2 130287140 130287191 -120400663 - L2 LINE L2 -1050 2264 2224 2953 9 0 3 chr2 130288062 130288381 -120399473 - AluYb8 SINE Alu 0 318 1 1182 205 138 31 chr2 130288457 130288784 -120399070 - MLT1A1 LTR MaLR 0 365 4 252 264 176 74 chr2 130288960 130289108 -120398746 + MER5A DNA MER1_type 18 180 -9 425 244 41 16 chr2 130289278 130289401 -120398453 - MIR SINE MIR -76 186 61 255 274 98 51 chr2 130289719 130289934 -120397920 + L1ME LINE L1 5597 5810 -311 1262 88 0 6 chr2 130289942 130290101 -120397753 + AluSq SINE Alu 1 158 -155 1187 236 108 11 chr2 130290207 130290559 -120397295 + MER77 LTR ERV1 220 605 0 5321 55 3 0 chr2 130290828 130291518 -120396336 + L1PA6 LINE L1 5288 5979 -175 356 145 0 26 chr2 130291618 130291694 -120396160 + (TCCCC)n Simple_repeat Simple_repeat 2 75 0 294 234 60 53 chr2 130292671 130292804 -120395050 - MER5A DNA MER1_type -4 174 48 2288 92 3 0 chr2 130292810 130293093 -120394761 - AluSc SINE Alu -25 284 1 585 147 59 44 chr2 130293097 130293233 -120394621 - L1MA6 LINE L1 0 6300 6163 328 198 10 10 chr2 130293407 130293503 -120394351 + CT-rich Low_complexity Low_complexity 1 96 0 303 310 45 80 chr2 130293503 130293703 -120394151 - L2 LINE L2 0 3313 3121 1143 59 0 0 chr2 130293709 130293845 -120394009 + AluSq SINE Alu 167 302 -11 412 242 62 67 chr2 130293872 130294050 -120393804 - L2 LINE L2 -230 3083 2907 394 241 167 56 chr2 130294453 130294615 -120393239 - MIR SINE MIR -2 260 81 369 0 0 0 chr2 130295310 130295351 -120392503 + (TG)n Simple_repeat Simple_repeat 2 42 0 2268 123 0 0 chr2 130295351 130295659 -120392195 - AluSg SINE Alu -2 308 1 196 318 0 15 chr2 130296364 130296430 -120391424 - L2 LINE L2 -1 3271 3207 2596 74 0 0 chr2 130296528 130296839 -120391015 + AluY SINE Alu 1 311 0 1480 240 81 36 chr2 130297254 130297858 -120389996 + L1MD2 LINE L1 1 576 -5964 2358 84 3 3 chr2 130297858 130298154 -120389700 + AluSc SINE Alu 1 296 -13 1480 240 81 36 chr2 130298154 130298285 -120389569 + L1MD2 LINE L1 576 1174 -5366 744 79 0 0 chr2 130298285 130298386 -120389468 - AluY SINE Alu -6 305 205 1417 109 5 5 chr2 130298386 130298607 -120389247 - pTR5 LTR ERV1 -2046 392 172 369 229 10 0 chr2 130298610 130298706 -120389148 - LTR30 LTR ERV1 -80 642 546 5656 118 51 63 chr2 130298708 130299872 -120387982 - pTR5 LTR ERV1 -413 2025 743 1651 82 0 0 chr2 130299872 130300078 -120387776 - AluY SINE Alu -103 208 3 7253 223 58 33 chr2 130300079 130302704 -120385150 + L1MD2 LINE L1 1167 3724 -2816 2000 159 3 0 chr2 130302704 130303006 -120384848 - AluSx SINE Alu -9 303 1 7253 223 58 33 chr2 130303006 130303489 -120384365 + L1MD2 LINE L1 3724 4193 -2347 2207 107 4 0 chr2 130303489 130303795 -120384059 + AluSx SINE Alu 1 307 0 7253 223 58 33 chr2 130303795 130304146 -120383708 + L1MD2 LINE L1 4193 4534 -2006 1951 140 0 0 chr2 130304146 130304418 -120383436 + AluSg SINE Alu 1 272 -38 437 0 19 0 chr2 130304427 130304480 -120383374 + (CA)n Simple_repeat Simple_repeat 1 54 0 7253 223 58 33 chr2 130304480 130304998 -120382856 + L1MD2 LINE L1 4541 5254 -1286 1112 225 18 33 chr2 130305018 130305293 -120382561 - L1ME1 LINE L1 -5 6161 5890 2247 100 7 0 chr2 130305293 130305593 -120382261 - AluY SINE Alu -9 302 1 1112 225 18 33 chr2 130305593 130305646 -120382208 - L1ME1 LINE L1 -276 5890 5838 3447 218 93 36 chr2 130305657 130306712 -120381142 + L1MD2 LINE L1 5273 6434 -319 2364 96 0 0 chr2 130306712 130307014 -120380840 - AluSq SINE Alu -11 302 1 3447 218 93 36 chr2 130307014 130307343 -120380511 + L1MD2 LINE L1 6434 6743 -10 758 179 12 29 chr2 130307461 130307726 -120380128 + CT-rich Low_complexity Low_complexity 1 260 0 2243 127 0 0 chr2 130307737 130308044 -120379810 - AluSg SINE Alu -3 307 1 4229 62 48 0 chr2 130308092 130308656 -120379198 + LTR10C LTR ERV1 1 591 0 250 277 135 77 chr2 130309361 130309635 -120378219 - L2 LINE L2 0 3272 2983 446 224 32 16 chr2 130309697 130309822 -120378032 - LTR67 LTR ERVL -2 555 429 1433 204 21 31 chr2 130310004 130310446 -120377408 + LTR2B LTR ERV1 1 490 0 433 289 37 0 chr2 130310827 130310962 -120376892 + L1ME LINE L1 5557 5696 -425 2076 69 109 0 chr2 130310976 130311252 -120376602 + AluYa5 SINE Alu 1 306 -5 2340 98 0 0 chr2 130311312 130311607 -120376247 + AluSx SINE Alu 6 300 -12 232 320 0 0 chr2 130312822 130312897 -120374957 + MIR SINE MIR 72 146 -116 212 169 102 17 chr2 130313346 130313405 -120374449 + L2 LINE L2 3191 3254 -18 932 158 0 0 chr2 130313964 130314097 -120373757 - AluSq/x SINE Alu -179 133 1 998 260 20 55 chr2 130315105 130315252 -120372602 - L1M4 LINE L1 -2309 3837 3686 2415 109 0 0 chr2 130315252 130315565 -120372289 - AluSq SINE Alu 0 313 1 998 260 20 55 chr2 130315565 130315817 -120372037 - L1M4 LINE L1 -2460 3686 3452 1669 282 25 14 chr2 130315957 130316510 -120371344 - L1MCb LINE L1 -5483 562 4 181 210 57 169 chr2 130316609 130316733 -120371121 + MIR SINE MIR 35 144 -64 1692 194 86 0 chr2 130316800 130317160 -120370694 + LTR32 LTR ERVL 9 399 -72 225 148 19 37 chr2 130317712 130317766 -120370088 + (CACCC)n Simple_repeat Simple_repeat 2 54 0 305 325 92 8 chr2 130318659 130318779 -120369075 + L2 LINE L2 3143 3272 0 683 259 63 43 chr2 130319650 130319905 -120367949 - LTR40a LTR ERVL 0 519 260 1601 114 180 12 chr2 130319922 130320177 -120367677 - AluSg1 SINE Alu -11 298 1 232 316 141 17 chr2 130321164 130321341 -120366513 + L2 LINE L2 3024 3222 -91 2382 103 3 0 chr2 130321420 130321730 -120366124 - AluSx SINE Alu -1 311 1 222 341 98 41 chr2 130322350 130322473 -120365381 + MIR3 SINE MIR 13 142 -66 766 116 16 39 chr2 130324607 130324736 -120363118 - L1PA16 LINE L1 0 6166 6041 1474 93 0 43 chr2 130324737 130324967 -120362887 - LTR12 LTR ERV1 0 714 495 952 61 0 0 chr2 130324961 130325075 -120362779 - LTR12 LTR ERV1 -548 166 53 * 258 231 0 0 chr2 130325075 130325127 -120362727 - LTR30 LTR ERV1 -670 52 1 1518 125 0 0 chr2 130325127 130325343 -120362511 - L1PA16 LINE L1 -123 6043 5828 2103 101 10 14 chr2 130325344 130325640 -120362214 - AluSx SINE Alu -3 309 15 273 170 0 0 chr2 130325648 130325695 -120362159 + L1MC3 LINE L1 6200 6246 -1539 477 211 0 0 chr2 130325955 130326069 -120361785 + L1M4 LINE L1 2822 2935 -3211 10425 188 32 9 chr2 130326072 130328575 -120359279 + L1M2 LINE L1 3112 5665 -647 9941 232 34 16 chr2 130328573 130331731 -120356123 - L1M4 LINE L1 -537 5716 2501 * 2795 3 0 0 chr2 130331860 130332153 -120355701 - AluYa5 SINE Alu -18 293 1 1242 234 101 39 chr2 130332261 130332676 -120355178 + MER77 LTR ERV1 154 594 -11 376 303 79 43 chr2 130332769 130333319 -120354535 - L1M4 LINE L1 -3944 2271 1731 835 280 77 33 chr2 130333340 130333859 -120353995 - L1M4c LINE L1 -4451 2687 1990 2384 132 56 42 chr2 130333860 130334268 -120353586 - MSTB LTR MaLR -12 414 1 8582 193 46 1 chr2 130334273 130335849 -120352005 - MSTB-int LTR MaLR -5 1646 1 2454 159 60 2 chr2 130335849 130336252 -120351602 - MSTB LTR MaLR 0 426 1 2442 87 0 13 chr2 130336263 130336573 -120351281 - AluY SINE Alu -5 306 1 742 246 14 53 chr2 130336584 130336941 -120350913 - L1M4c LINE L1 -4869 1986 1644 4664 230 52 15 chr2 130336941 130337756 -120350098 - L1M4c LINE L1 -5690 1169 305 1638 144 133 32 chr2 130337756 130338095 -120349759 - THE1C LTR MaLR 0 375 3 4664 230 52 15 chr2 130338095 130338326 -120349528 - L1M4c LINE L1 -6554 305 84 288 77 0 0 chr2 130338339 130338378 -120349476 + (TG)n Simple_repeat Simple_repeat 2 40 0 377 255 163 0 chr2 130338394 130338578 -120349276 + L1ME LINE L1 5581 5794 -327 4206 148 48 51 chr2 130338650 130338693 -120349161 - L1MB3 LINE L1 -8 6175 6133 2266 99 7 0 chr2 130338693 130338985 -120348869 - AluSc SINE Alu -15 294 1 4206 148 48 51 chr2 130338985 130339286 -120348568 - L1MB3 LINE L1 -50 6133 5832 1955 133 7 40 chr2 130339286 130339588 -120348266 - AluSq SINE Alu -21 292 1 4206 148 48 51 chr2 130339588 130340124 -120347730 - L1MB3 LINE L1 -351 5832 5297 1736 207 14 31 chr2 130340156 130340576 -120347278 - L1MB3 LINE L1 -819 5327 4915 397 197 51 29 chr2 130340579 130340716 -120347138 - L1MB3 LINE L1 -2868 3278 3139 474 18 0 0 chr2 130341142 130341197 -120346657 + (CA)n Simple_repeat Simple_repeat 2 56 0 296 235 31 20 chr2 130342843 130342941 -120344913 + GA-rich Low_complexity Low_complexity 3 101 0 238 264 203 7 chr2 130343493 130343641 -120344213 - MER5A DNA MER1_type 0 189 13 813 276 4 4 chr2 130344173 130344412 -120343442 - L1ME2 LINE L1 -331 5833 5595 428 288 115 60 chr2 130344459 130344615 -120343239 - L2 LINE L2 0 3313 3167 2106 121 3 13 chr2 130344615 130344928 -120342926 + AluSx SINE Alu 1 310 -2 428 288 115 60 chr2 130344928 130345188 -120342666 - L2 LINE L2 -146 3167 2874 315 356 20 13 chr2 130345319 130345468 -120342386 + L2 LINE L2 3123 3272 0 199 342 75 0 chr2 130345486 130345606 -120342248 - L2 LINE L2 -8 3264 3136 1853 127 74 11 chr2 130346082 130346366 -120341488 + AluSx SINE Alu 1 302 -10 2036 251 45 39 chr2 130346423 130346759 -120341095 + L1ME3A LINE L1 5513 5856 -314 2507 69 0 3 chr2 130346759 130347064 -120340790 + AluY SINE Alu 1 304 -7 2036 251 45 39 chr2 130347064 130347373 -120340481 + L1ME3A LINE L1 5856 6162 -8 605 254 146 10 chr2 130347368 130347573 -120340281 + HAL1 LINE L1 79 311 -2196 * 942 211 241 29 chr2 130347629 130348003 -120339851 + HAL1 LINE L1 1428 1880 -627 1551 259 67 52 chr2 130348030 130348201 -120339653 + L1MC5 LINE L1 6226 6393 -1568 1697 180 52 46 chr2 130348201 130348589 -120339265 - MLT1B LTR MaLR 0 390 1 1551 259 67 52 chr2 130348589 130349370 -120338484 + L1MC5 LINE L1 6393 7219 -742 396 306 30 15 chr2 130349510 130349644 -120338210 - MER5B DNA MER1_type -35 143 8 547 185 28 0 chr2 130349727 130349835 -120338019 - MER5A DNA MER1_type 0 189 79 750 234 35 0 chr2 130349887 130350058 -120337796 - MER5B DNA MER1_type -1 177 1 718 287 59 36 chr2 130350058 130350501 -120337353 + L1MC5 LINE L1 7330 7782 -179 902 284 91 10 chr2 130350649 130351043 -120336811 + HAL1 LINE L1 1936 2361 -146 472 290 161 29 chr2 130352563 130352984 -120334870 - L2 LINE L2 -10 3303 2827 538 300 121 55 chr2 130353024 130353620 -120334234 - L2 LINE L2 -633 2681 2047 1119 225 121 71 chr2 130354941 130355447 -120332407 - MER65B LTR ERV1 0 531 1 426 276 119 75 chr2 130355452 130355982 -120331872 + L1MC4a LINE L1 589 1141 -4978 395 350 46 20 chr2 130355998 130356304 -120331550 + L1MC4a LINE L1 1223 1536 -4774 233 258 56 11 chr2 130356312 130356401 -120331453 + HAL1 LINE L1 1630 1722 -785 306 304 55 69 chr2 130356745 130356962 -120330892 + L1MC4a LINE L1 2294 2507 -3622 329 323 45 15 chr2 130357045 130357178 -120330676 - MIR SINE MIR -117 145 9 541 275 133 49 chr2 130357258 130357665 -120330189 - L2 LINE L2 0 3313 2873 1921 201 8 6 chr2 130357958 130358322 -120329532 - MLT1A1 LTR MaLR 0 365 1 2207 71 4 0 chr2 130358814 130359082 -120328772 - AluY SINE Alu -15 296 28 262 200 138 0 chr2 130360169 130360234 -120327620 + MER103 DNA DNA 47 120 -46 180 359 0 13 chr2 130360564 130360642 -120327212 + MIR SINE MIR 17 93 -169 180 161 0 0 chr2 130360687 130360718 -120327136 + MIR SINE MIR 158 188 -74 243 175 0 35 chr2 130365488 130365545 -120322309 + MIR SINE MIR 93 147 -61 2219 172 65 5 chr2 130366699 130367101 -120320753 - MSTB LTR MaLR 0 426 1 295 267 76 8 chr2 130367901 130368032 -120319822 + HAL1 LINE L1 947 1086 -1421 23 0 0 0 chr2 130368135 130368158 -120319696 + AT_rich Low_complexity Low_complexity 1 23 0 340 283 134 47 chr2 130368272 130368548 -120319306 + HAL1 LINE L1 1370 1669 -838 1846 134 22 26 chr2 130368832 130369183 -120318671 + AluSx SINE Alu 1 350 0 2301 100 7 13 chr2 130369260 130369569 -120318285 + AluSx SINE Alu 1 307 -5 503 276 60 13 chr2 130370442 130370674 -120317180 + L1MC4a LINE L1 2940 3182 -2947 7610 123 32 12 chr2 130370687 130372781 -120315073 - L1PA12 LINE L1 -1 6167 4052 249 293 0 0 chr2 130373250 130373308 -120314546 + L1P LINE L1 3717 3774 -2372 1603 145 45 75 chr2 130373523 130373881 -120313973 - LTR42 LTR ERVL -148 347 1 574 325 120 27 chr2 130374085 130374783 -120313071 + L1MC4a LINE L1 4282 5044 -1085 594 278 151 56 chr2 130374969 130375558 -120312296 + L1MC4a LINE L1 5250 5894 -1897 258 32 0 0 chr2 130375618 130375649 -120312205 + (TG)n Simple_repeat Simple_repeat 1 31 0 383 319 20 25 chr2 130376525 130376696 -120311158 - MIR SINE MIR -63 145 18 2261 97 10 7 chr2 130377262 130377562 -120310292 + AluSq SINE Alu 1 301 -12 1448 248 67 49 chr2 130378552 130379243 -120308611 - HAL1b LINE L1 -201 1147 445 280 170 0 0 chr2 130379269 130379322 -120308532 - L1MB4 LINE L1 0 6180 6128 2489 85 3 0 chr2 130379443 130379748 -120308106 - AluSg SINE Alu -4 306 1 229 250 65 37 chr2 130379934 130380042 -120307812 - HAL1b LINE L1 -978 370 260 2175 35 0 11 chr2 130382302 130382562 -120305292 + AluY SINE Alu 42 298 -13 429 283 75 33 chr2 130382657 130382869 -120304985 - L2 LINE L2 0 3313 3093 516 266 85 41 chr2 130383860 130383918 -120303936 + L1ME4a LINE L1 5557 5611 -510 2176 114 3 10 chr2 130383918 130384225 -120303629 + AluSx SINE Alu 1 305 -7 516 266 85 41 chr2 130384225 130384485 -120303369 + L1ME4a LINE L1 5611 5889 -232 370 328 0 0 chr2 130384635 130384751 -120303103 + L2 LINE L2 3184 3299 -14 2901 169 33 5 chr2 130384756 130385307 -120302547 - L1MB7 LINE L1 -260 6422 5857 1948 140 0 19 chr2 130385307 130385476 -120302378 - AluSx SINE Alu -11 301 139 1925 131 3 36 chr2 130385476 130385781 -120302073 - AluSp SINE Alu -18 295 1 1948 140 0 19 chr2 130385781 130385918 -120301936 - AluSx SINE Alu -173 139 1 1031 113 0 0 chr2 130385921 130386054 -120301800 - AluSq/x SINE Alu -180 133 1 4432 211 96 11 chr2 130386055 130386283 -120301571 - L1MB7 LINE L1 -776 5868 5661 243 0 0 0 chr2 130386283 130386310 -120301544 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 4432 211 96 11 chr2 130386310 130387333 -120300521 - L1MB7 LINE L1 -983 5661 4511 5899 111 14 8 chr2 130387365 130388770 -120299084 - L1PA11 LINE L1 0 6174 4748 806 61 0 9 chr2 130388971 130389085 -120298769 + (TTCC)n Simple_repeat Simple_repeat 3 115 0 1743 175 10 25 chr2 130389121 130389435 -120298419 - AluSx SINE Alu -3 309 1 180 314 76 64 chr2 130391247 130391419 -120296435 + L2 LINE L2 2864 3037 -235 1792 261 57 0 chr2 130392145 130392651 -120295203 + REP3 LTR ERV 10 544 -18 290 289 164 0 chr2 130393367 130393495 -120294359 - MER5B DNA MER1_type -26 152 4 261 0 0 0 chr2 130394076 130394105 -120293749 + (TG)n Simple_repeat Simple_repeat 2 30 0 321 308 101 35 chr2 130394291 130394460 -120293394 - MIR SINE MIR -75 187 8 323 304 29 0 chr2 130394616 130394754 -120293100 + L1ME4a LINE L1 5963 6104 -17 19243 149 30 21 chr2 130395590 130400347 -120287507 - L1P3 LINE L1 -1490 4971 2 2012 257 57 39 chr2 130400406 130400702 -120287152 - L1MB7 LINE L1 -2726 3918 3629 2277 72 0 34 chr2 130400702 130401158 -120286696 - AluY SINE Alu 0 446 1 2012 257 57 39 chr2 130401158 130401789 -120286065 - L1MB7 LINE L1 -3015 3629 2973 2280 223 133 28 chr2 130401803 130402511 -120285343 - L1MB7 LINE L1 -5745 797 16 238 270 16 0 chr2 130402937 130403000 -120284854 + GA-rich Low_complexity Low_complexity 3 66 0 1794 176 79 8 chr2 130404987 130405367 -120282487 + LTR49 LTR ERV1 4 410 -185 2287 136 21 15 chr2 130405367 130405756 -120282098 + MER57A LTR ERV1 13 403 0 542 169 135 62 chr2 130405756 130405934 -120281920 + LTR49 LTR ERV1 405 595 0 716 249 53 0 chr2 130406191 130406360 -120281494 - MER45A DNA AcHobo 0 178 1 324 350 0 0 chr2 130406395 130406495 -120281359 - MIR SINE MIR -143 119 20 345 158 13 13 chr2 130406538 130406614 -120281240 - MER116 DNA Mariner -4 76 1 345 314 73 29 chr2 130407009 130407324 -120280530 + L1ME4a LINE L1 5563 5891 -230 318 289 79 18 chr2 130408518 130408632 -120279222 - MER94 DNA DNA -9 125 5 221 98 24 0 chr2 130411471 130411512 -120276342 + (TCCC)n Simple_repeat Simple_repeat 4 45 0 180 214 286 0 chr2 130411521 130411563 -120276291 - L2 LINE L2 -25 3288 3235 190 239 0 87 chr2 130411589 130411681 -120276173 - L2 LINE L2 -173 3099 3016 463 331 104 12 chr2 130412267 130412602 -120275252 - L1M4 LINE L1 -841 5305 4940 389 285 50 77 chr2 130412755 130413159 -120274695 + MLT1J LTR MaLR 110 502 -9 195 222 16 63 chr2 130414308 130414371 -120273483 - L2 LINE L2 -9 3304 3245 380 237 30 15 chr2 130415318 130415453 -120272401 + MER69 DNA AcHobo 38 174 -2352 186 351 39 39 chr2 130416714 130416868 -120270986 - MIR3 SINE MIR -38 170 17 2683 48 0 0 chr2 130418169 130418480 -120269374 + AluY SINE Alu 1 311 0 2808 193 18 27 chr2 130419784 130419825 -120268029 - L1MB3 LINE L1 -7 6176 6136 2118 116 0 0 chr2 130419825 130420102 -120267752 + AluSx SINE Alu 1 277 -35 292 69 0 35 chr2 130420107 130420165 -120267689 + (TAAAA)n Simple_repeat Simple_repeat 2 57 0 2808 193 18 27 chr2 130420165 130420714 -120267140 - L1MB3 LINE L1 -51 6132 5585 201 154 26 0 chr2 130421186 130421225 -120266629 - MIR SINE MIR -114 148 109 515 209 0 21 chr2 130422299 130422643 -120265211 + (TG)n Simple_repeat Simple_repeat 1 336 0 220 276 0 26 chr2 130422656 130422732 -120265122 + (TG)n Simple_repeat Simple_repeat 1 74 0 519 237 0 15 chr2 130422909 130423252 -120264602 + (TG)n Simple_repeat Simple_repeat 1 337 0 2619 116 39 35 chr2 130424811 130425242 -120262612 + MER57B LTR ERV1 1 433 -1 182 239 87 0 chr2 130425778 130425824 -120262030 - MIR3 SINE MIR -53 155 106 358 166 13 68 chr2 130426381 130426699 -120261155 + (CA)n Simple_repeat Simple_repeat 1 300 0 324 183 20 54 chr2 130426722 130427134 -120260720 + (CA)n Simple_repeat Simple_repeat 1 398 0 288 326 15 30 chr2 130428714 130428846 -120259008 - L2 LINE L2 -6 3266 3137 219 331 39 16 chr2 130429033 130429160 -120258694 - MIR SINE MIR -22 240 111 537 235 31 68 chr2 130429873 130430035 -120257819 + HsTC2 DNA Tc2 4 159 -1739 339 319 17 0 chr2 130430047 130430166 -120257688 - MER94 DNA DNA -12 122 2 1101 256 63 9 chr2 130430180 130430528 -120257326 + HsTC2 DNA Tc2 174 540 -1358 393 341 18 0 chr2 130430878 130431045 -120256809 + MIR SINE MIR 93 262 0 2095 151 45 98 chr2 130431168 130431207 -120256647 - MLT2C2 LTR ERVL 0 464 424 195 69 0 0 chr2 130431207 130431236 -120256618 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 2095 151 45 98 chr2 130431236 130431686 -120256168 - MLT2C2 LTR ERVL -40 424 1 322 264 45 18 chr2 130432395 130432505 -120255349 + MIR SINE MIR 34 146 -62 2265 156 31 24 chr2 130434599 130434828 -120253026 - MSTB LTR MaLR -5 421 186 2359 106 0 0 chr2 130434828 130435130 -120252724 - AluSq SINE Alu -11 302 1 2265 156 31 24 chr2 130435130 130435316 -120252538 - MSTB LTR MaLR -240 186 3 267 54 0 0 chr2 130435317 130435354 -120252500 + (CA)n Simple_repeat Simple_repeat 2 38 0 1288 228 132 24 chr2 130435558 130435936 -120251918 - L1MD2 LINE L1 -2 6751 6333 1205 260 67 5 chr2 130435926 130436330 -120251524 - L1MD2 LINE L1 -754 5786 5358 * 556 151 58 17 chr2 130436355 130436527 -120251327 + CT-rich Low_complexity Low_complexity 2 180 0 1024 221 66 13 chr2 130436563 130436866 -120250988 - L1MD2 LINE L1 -1231 5309 4991 3982 97 16 28 chr2 130436868 130437485 -120250369 - MER4B LTR ERV1 0 610 1 2443 139 3 18 chr2 130437489 130437870 -120249984 - MER4B-int LTR ERV1 -5 6753 6379 525 148 0 0 chr2 130437870 130437951 -120249903 - MER4B-int LTR ERV1 -6460 298 218 322 308 0 3 chr2 130437951 130438084 -120249770 - L1MDb LINE L1 -1520 4886 4756 3246 262 43 17 chr2 130438122 130439276 -120248578 - L1MDb LINE L1 -1796 4610 3427 1734 266 78 18 chr2 130439286 130439786 -120248068 + MER68 LTR ERV1 22 551 -11 2299 254 69 14 chr2 130439793 130440657 -120247197 - L1MDb LINE L1 -2972 3434 2523 685 234 52 34 chr2 130440668 130440937 -120246917 - L1MD2 LINE L1 -3962 2578 2305 656 210 3 37 chr2 130440938 130441110 -120246744 - L1MD2 LINE L1 -4987 1556 1260 3131 238 65 51 chr2 130441125 130442142 -120245712 - L1MDb LINE L1 -4245 2161 1160 2014 152 0 7 chr2 130442142 130442445 -120245409 - AluSx SINE Alu -11 301 1 3131 238 65 51 chr2 130442445 130443406 -120244448 - L1MDb LINE L1 -5246 1160 11 630 290 148 7 chr2 130444027 130444527 -120243327 + MLT1L LTR MaLR 18 615 0 2490 109 43 3 chr2 130444530 130444880 -120242974 + THE1B LTR MaLR 1 364 0 326 335 36 0 chr2 130445056 130445223 -120242631 - MIR3 SINE MIR -3 205 33 314 324 62 0 chr2 130445938 130446083 -120241771 + MER5B DNA MER1_type 9 162 -16 231 174 14 58 chr2 130447279 130447348 -120240506 + CT-rich Low_complexity Low_complexity 2 67 0 466 79 0 40 chr2 130448211 130448287 -120239567 - L1MA5A LINE L1 0 6297 6225 1807 213 126 10 chr2 130448287 130449115 -120238739 + L1MD2 LINE L1 4851 5783 -576 980 220 74 60 chr2 130449115 130449451 -120238403 - MER2 DNA MER2_type 0 344 4 819 137 8 0 chr2 130449475 130449599 -120238255 + Tigger3(Golem) DNA MER2_type 47 171 -2858 255 210 49 25 chr2 130449599 130449680 -120238174 + L1MD2 LINE L1 6274 6356 -3 3273 116 23 6 chr2 130449725 130450206 -120237648 + Tigger3(Golem) DNA MER2_type 2519 3007 -22 2084 111 3 7 chr2 130450207 130450496 -120237358 + AluSc SINE Alu 1 288 -21 537 129 43 0 chr2 130450498 130450637 -120237217 + (TA)n Simple_repeat Simple_repeat 1 145 0 2446 216 22 9 chr2 130450668 130451210 -120236644 + L1MD2 LINE L1 5789 6337 -22 356 239 79 93 chr2 130451290 130451570 -120236284 + LTR16B LTR ERVL 9 284 -180 316 356 109 17 chr2 130451817 130452165 -120235689 + L2 LINE L2 2890 3269 -3 1422 269 69 21 chr2 130455041 130455566 -120232288 + MLT1H1 LTR MaLR 2 551 -4 426 345 104 19 chr2 130456909 130457415 -120230439 + L1MEd LINE L1 1076 1657 -4653 13203 101 7 26 chr2 130457479 130459496 -120228358 + L1PA7 LINE L1 8 2030 -4431 203 59 0 29 chr2 130459498 130459532 -120228322 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 7639 30 0 0 chr2 130459538 130460506 -120227348 - L1PA4 LINE L1 -24 6131 5164 * 26347 85 6 2 chr2 130460504 130464917 -120222937 + L1PA7 LINE L1 2027 6454 -15 325 209 47 23 chr2 130464917 130465003 -120222851 - L1MC4 LINE L1 -1340 6702 6615 * 336 208 0 62 chr2 130464932 130465028 -120222826 + L1MC4 LINE L1 6614 6703 -1339 207 0 0 0 chr2 130465032 130465055 -120222799 + (GA)n Simple_repeat Simple_repeat 2 24 0 2496 174 19 39 chr2 130465329 130465421 -120222433 - L1MB2 LINE L1 0 6171 6079 2194 119 7 0 chr2 130465421 130465716 -120222138 + AluSx SINE Alu 1 297 -15 2496 174 19 39 chr2 130465716 130466162 -120221692 - L1MB2 LINE L1 -92 6079 5644 203 167 0 0 chr2 130466654 130466690 -120221164 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 388 250 47 54 chr2 130467698 130467846 -120220008 - L2 LINE L2 0 3313 3167 1181 230 184 35 chr2 130467955 130468389 -120219465 + MLT1D LTR MaLR 1 499 -6 5578 131 34 17 chr2 130468556 130468770 -120219084 - L1PB4 LINE L1 -1 6155 5946 1992 114 0 20 chr2 130468770 130469067 -120218787 - AluSq SINE Alu -5 308 18 5578 131 34 17 chr2 130469067 130469898 -120217956 - L1PB4 LINE L1 -210 5946 5101 1829 235 56 48 chr2 130469906 130470552 -120217302 - L1ME2 LINE L1 -9 6224 5574 3932 205 76 27 chr2 130470579 130472448 -120215406 - L1MB3 LINE L1 -122 6061 4093 2555 28 3 0 chr2 130472453 130472741 -120215113 - AluY SINE Alu -6 305 17 1092 189 15 30 chr2 130472741 130473005 -120214849 - L1MB3 LINE L1 -2120 4026 3767 1790 224 48 8 chr2 130473013 130473673 -120214181 - L1ME2 LINE L1 -749 5466 4856 292 235 0 29 chr2 130473678 130473746 -120214108 + MER21B LTR ERV1 1 66 -797 286 288 41 0 chr2 130473781 130473854 -120214000 + MER21B LTR ERV1 19 94 -769 * 335 250 14 0 chr2 130473852 130473924 -120213930 + MER21B LTR ERV1 43 115 -748 183 42 0 0 chr2 130474133 130474157 -120213697 + (T)n Simple_repeat Simple_repeat 1 24 0 3326 213 56 20 chr2 130474477 130475178 -120212676 + MER21B LTR ERV1 134 859 -4 27326 58 4 0 chr2 130475213 130480469 -120207385 + L1P LINE L1 2 5280 -866 24 0 0 0 chr2 130480482 130480506 -120207348 + AT_rich Low_complexity Low_complexity 1 24 0 883 174 25 31 chr2 130480507 130480668 -120207186 + AluJb SINE Alu 132 291 -21 928 164 109 71 chr2 130480668 130480722 -120207132 - L1M2 LINE L1 -481 5810 5760 2820 3 0 0 chr2 130480722 130481021 -120206833 + AluYa5 SINE Alu 1 299 -12 928 164 109 71 chr2 130481021 130481204 -120206650 - L1M2 LINE L1 -531 5760 5564 707 235 8 0 chr2 130481227 130481359 -120206495 + MER8 DNA MER2_type 107 239 0 1616 135 36 0 chr2 130481369 130481643 -120206211 - L1M2 LINE L1 -753 5538 5255 310 282 8 43 chr2 130481670 130481787 -120206067 - L1ME2 LINE L1 -1357 4858 4746 1737 168 7 13 chr2 130481787 130482090 -120205764 + AluJo SINE Alu 11 311 -1 1039 253 10 3 chr2 130482138 130482427 -120205427 - L1ME2 LINE L1 -1457 4758 4468 2798 232 94 41 chr2 130482433 130483877 -120203977 - L1ME2 LINE L1 -2750 3465 2014 1978 246 113 37 chr2 130484019 130484998 -120202856 - L1ME2 LINE L1 -4343 2053 1000 468 252 57 29 chr2 130485021 130485231 -120202623 - L1ME2 LINE L1 -5455 941 726 * 44098 30 21 1 chr2 130485224 130491256 -120196598 - L1PA2 LINE L1 0 6155 1 1957 264 59 24 chr2 130491264 130491960 -120195894 - L1ME2 LINE L1 -5640 756 37 412 341 62 6 chr2 130492101 130492277 -120195577 + MIR SINE MIR 61 246 -16 339 189 9 132 chr2 130492276 130492382 -120195472 - MIR SINE MIR -130 132 40 * 274 242 32 25 chr2 130492822 130492979 -120194875 + (TA)n Simple_repeat Simple_repeat 1 158 0 196 94 47 31 chr2 130493049 130493113 -120194741 + (TA)n Simple_repeat Simple_repeat 1 65 0 325 287 52 17 chr2 130493220 130493335 -120194519 + MIR SINE MIR 54 172 -90 864 307 60 26 chr2 130494819 130495284 -120192570 + L2 LINE L2 2493 3012 -301 272 221 103 0 chr2 130495287 130495355 -120192499 + MLT2D LTR ERVL 206 280 -134 575 272 50 55 chr2 130495432 130495634 -120192220 + MER63A DNA MER1_type 5 205 -5 456 256 62 41 chr2 130495648 130495843 -120192011 + L2 LINE L2 3109 3307 -6 211 336 142 0 chr2 130495859 130495972 -120191882 - L2 LINE L2 -25 3247 3119 573 154 218 9 chr2 130496486 130496596 -120191258 - AluJb SINE Alu -178 134 2 2171 108 0 40 chr2 130496624 130496948 -120190906 + AluSx SINE Alu 1 311 -1 268 255 41 31 chr2 130497349 130497447 -120190407 + LTR33 LTR ERVL 68 166 -355 21 57 0 0 chr2 130498400 130498435 -120189419 + AT_rich Low_complexity Low_complexity 1 35 0 271 299 37 22 chr2 130498478 130498612 -120189242 + L1ME LINE L1 5561 5696 -425 389 263 32 0 chr2 130498612 130498707 -120189147 - L2 LINE L2 -2 3311 3214 270 318 56 8 chr2 130498804 130498930 -120188924 + L1MDa LINE L1 22 153 -6387 183 80 0 0 chr2 130498981 130499006 -120188848 + (T)n Simple_repeat Simple_repeat 1 25 0 998 310 70 13 chr2 130499395 130499934 -120187920 + L1MDa LINE L1 1111 1680 -4860 * 1840 221 34 8 chr2 130499930 130500535 -120187319 + L1M4 LINE L1 4933 5555 -623 523 284 161 50 chr2 130502320 130502736 -120185118 - MLT1K LTR MaLR -3 585 124 249 33 0 0 chr2 130504020 130504050 -120183804 + (TG)n Simple_repeat Simple_repeat 1 30 0 238 331 35 42 chr2 130504720 130504862 -120182992 + MIR3 SINE MIR 3 143 -65 25 0 0 0 chr2 130505211 130505236 -120182618 + AT_rich Low_complexity Low_complexity 1 25 0 2371 186 61 109 chr2 130505767 130506602 -120181252 - LTR1B LTR ERV1 -42 784 1 247 202 22 0 chr2 130506851 130506940 -120180914 + (TG)n Simple_repeat Simple_repeat 1 91 0 270 320 20 20 chr2 130507135 130507282 -120180572 + HAL1 LINE L1 1198 1344 -1163 22 0 0 0 chr2 130507407 130507429 -120180425 + AT_rich Low_complexity Low_complexity 1 22 0 7371 38 4 7 chr2 130507910 130508755 -120179099 + L1PA5 LINE L1 5313 6154 0 245 268 0 0 chr2 130508776 130508847 -120179007 + A-rich Low_complexity Low_complexity 1 71 0 5384 83 123 21 chr2 130508989 130509096 -120178758 - LTR12 LTR ERV1 0 826 731 2325 88 0 16 chr2 130509096 130509401 -120178453 + AluSq SINE Alu 1 300 -13 5384 83 123 21 chr2 130509401 130510043 -120177811 - LTR12 LTR ERV1 -95 731 1 388 223 158 29 chr2 130510163 130510287 -120177567 + MER5A DNA MER1_type 36 189 0 346 43 57 14 chr2 130510365 130510435 -120177419 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 942 246 101 64 chr2 130510491 130510656 -120177198 - L1MEc LINE L1 -2199 4016 3859 1553 151 0 29 chr2 130510656 130510901 -120176953 + AluJb SINE Alu 1 238 -74 942 246 101 64 chr2 130510901 130511332 -120176522 - L1MEc LINE L1 -2356 3859 3398 * 2464 218 38 0 chr2 130511326 130511880 -120175974 - L1MB7 LINE L1 -1 6994 6420 * 8048 240 53 22 chr2 130511879 130514485 -120173369 - L1MB7 LINE L1 -746 6211 3525 3681 70 27 5 chr2 130514550 130514993 -120172861 + MLT2A2 LTR ERVL 1 453 0 1374 278 73 92 chr2 130515476 130516420 -120171434 - L1MB7 LINE L1 -5923 936 11 2633 292 91 25 chr2 130516428 130518903 -120168951 - L1MEc LINE L1 -2800 3415 806 870 135 0 118 chr2 130519242 130519412 -120168442 - Tigger1 DNA MER2_type -2267 151 2 298 304 10 66 chr2 130519620 130519762 -120168092 - MIR SINE MIR -63 145 10 249 273 0 0 chr2 130519744 130519799 -120168055 - L2 LINE L2 -8 3264 3210 * 1026 167 65 124 chr2 130519990 130520413 -120167441 + MLT1B LTR MaLR 1 344 -46 212 182 0 36 chr2 130520420 130520475 -120167379 + (CATA)n Simple_repeat Simple_repeat 4 56 0 309 268 62 54 chr2 130520770 130520882 -120166972 - L2 LINE L2 -193 3079 2967 252 251 102 30 chr2 130521841 130522008 -120165846 + L1ME4a LINE L1 5725 5903 -218 528 233 60 0 chr2 130522030 130522163 -120165691 - MER112 DNA MER1_type -10 250 110 2196 139 53 31 chr2 130522178 130522594 -120165260 + MSTB1 LTR MaLR 8 432 0 267 220 189 37 chr2 130522678 130522869 -120164985 + L1ME4a LINE L1 5902 6121 0 2103 119 3 0 chr2 130523024 130523318 -120164536 + AluY SINE Alu 1 295 -16 2473 192 153 15 chr2 130523406 130523954 -120163900 - MLT1E3 LTR MaLR 0 624 1 247 278 134 10 chr2 130524219 130524316 -120163538 - MIR SINE MIR -63 145 37 296 260 30 40 chr2 130524475 130524575 -120163279 - MER117 DNA MER1_type -45 152 54 211 286 89 0 chr2 130525221 130525277 -120162577 - L2 LINE L2 -65 3207 3147 205 270 54 54 chr2 130526191 130526302 -120161552 - L2 LINE L2 -36 3277 3167 193 261 113 84 chr2 130526359 130526501 -120161353 - L2 LINE L2 0 3272 3127 1844 184 31 13 chr2 130527116 130527497 -120160357 + MLT1B LTR MaLR 2 389 -1 1255 78 0 6 chr2 130529087 130529254 -120158600 + AluSg SINE Alu 1 166 -144 660 175 0 18 chr2 130529255 130529369 -120158485 - LTR12 LTR ERV1 -244 470 359 280 293 0 0 chr2 130529369 130529468 -120158386 - LTR30 LTR ERV1 -98 624 526 1825 144 116 31 chr2 130529469 130529945 -120157909 - pTR5 LTR ERV1 -432 2006 1 2147 169 77 33 chr2 130530004 130530525 -120157329 - pTR5 LTR ERV1 -1391 1047 504 * 4976 86 0 0 chr2 130530493 130531181 -120156673 - HERV17 LTR ERV1 -209 8190 7503 665 166 41 33 chr2 130531179 130531491 -120156363 - HERV17 LTR ERV1 -3421 4978 703 * 243 254 28 0 chr2 130531523 130531594 -120156260 - MER112 DNA MER1_type -7 253 181 290 235 76 0 chr2 130531598 130531717 -120156137 - MER112 DNA MER1_type -34 226 99 332 292 44 9 chr2 130531943 130532056 -120155798 - L1ME LINE L1 -682 5482 5366 421 270 79 6 chr2 130532125 130532303 -120155551 - L1ME LINE L1 -874 5272 5082 530 242 8 8 chr2 130532324 130532448 -120155406 - FLAM_C SINE Alu -7 126 3 647 334 74 32 chr2 130532656 130533183 -120154671 - L1ME LINE L1 -1449 4697 4149 227 208 108 17 chr2 130533205 130533325 -120154529 - L1ME4a LINE L1 -1 6120 5990 2432 244 29 20 chr2 130533349 130534065 -120153789 - L1ME1 LINE L1 -21 6145 5423 252 143 0 0 chr2 130534091 130534140 -120153714 - L1MC3 LINE L1 -16 7769 7721 463 213 21 0 chr2 130534140 130534234 -120153620 + Tigger5 DNA MER2_type 1 96 -2227 * 979 119 83 42 chr2 130534233 130534426 -120153428 + Tigger5 DNA MER2_type 2123 2323 0 1141 189 33 4 chr2 130534445 130534688 -120153166 - L1MC3 LINE L1 -377 7391 7142 * 2081 183 94 45 chr2 130534682 130535044 -120152810 - L1MC3 LINE L1 -838 6930 6530 2246 98 0 19 chr2 130535044 130535361 -120152493 - AluY SINE Alu 0 311 1 2081 183 94 45 chr2 130535361 130535549 -120152305 - L1MC3 LINE L1 -1238 6530 6353 1138 184 123 136 chr2 130535549 130536070 -120151784 - MER67D LTR ERV1 0 514 1 1134 163 34 102 chr2 130536071 130536237 -120151617 - L1MC3 LINE L1 -1413 6355 6218 2248 101 11 0 chr2 130536237 130536554 -120151300 + AluSp SINE Alu 1 320 0 1134 163 34 102 chr2 130536554 130536710 -120151144 - L1MC3 LINE L1 -1550 6218 6053 1436 148 10 80 chr2 130536710 130537021 -120150833 - MLT1B LTR MaLR 0 390 102 2216 99 7 10 chr2 130537021 130537315 -120150539 - AluSq SINE Alu -14 299 7 3402 226 28 14 chr2 130537368 130538681 -120149173 - L1MC3 LINE L1 -746 5383 4598 3895 206 33 31 chr2 130538691 130540206 -120147648 + L1MB5 LINE L1 4651 6172 -2 1263 256 91 32 chr2 130540205 130540833 -120147021 - L1MC3 LINE L1 -1524 4605 3941 * 292 250 83 0 chr2 130540832 130540928 -120146926 - L1MC3 LINE L1 -539 7246 7143 * 540 142 28 9 chr2 130540923 130541029 -120146825 - L1MD3 LINE L1 -1618 6377 6270 22 0 0 0 chr2 130541357 130541379 -120146475 + AT_rich Low_complexity Low_complexity 1 22 0 5913 246 66 29 chr2 130541836 130541962 -120145892 - L1M4 LINE L1 -1295 5349 5229 2021 127 0 11 chr2 130541962 130542246 -120145608 + AluSx SINE Alu 1 281 -31 5913 246 66 29 chr2 130542246 130544931 -120142923 - L1M4 LINE L1 -1415 5229 2416 2771 229 51 95 chr2 130544938 130547104 -120140750 - L1M4 LINE L1 -4482 2164 76 1714 253 51 57 chr2 130547193 130548015 -120139839 - L1MC3 LINE L1 -4767 1362 546 1031 253 91 54 chr2 130548032 130548587 -120139267 + MER77 LTR ERV1 1 562 0 25 65 0 0 chr2 130548983 130549029 -120138825 + AT_rich Low_complexity Low_complexity 1 46 0 407 39 0 0 chr2 130549290 130549341 -120138513 - L1PA4 LINE L1 -81 6074 6024 752 52 0 0 chr2 130549345 130549441 -120138413 + L1PA3 LINE L1 6060 6155 0 362 335 57 0 chr2 130549442 130549654 -120138200 - L1MEc LINE L1 -4929 1467 1244 207 245 0 0 chr2 130550034 130550083 -120137771 + (CA)n Simple_repeat Simple_repeat 2 50 0 252 200 0 0 chr2 130550093 130550148 -120137706 + (TA)n Simple_repeat Simple_repeat 2 56 0 2185 141 125 8 chr2 130550185 130550568 -120137286 - MSTA LTR MaLR 0 428 1 1105 175 11 121 chr2 130550610 130550958 -120136896 - MLT2D LTR ERVL -164 250 1 579 319 63 100 chr2 130550964 130551485 -120136369 - L1MC3 LINE L1 -5596 523 22 7497 205 61 13 chr2 130552283 130554345 -120133509 - L1MC3 LINE L1 -9 8194 6034 1473 191 30 84 chr2 130554347 130554786 -120133068 + MLT1D LTR MaLR 1 415 -90 406 248 40 0 chr2 130554790 130554915 -120132939 - L1MC3 LINE L1 -1768 6017 5888 388 167 67 0 chr2 130554915 130555005 -120132849 + MLT1D LTR MaLR 408 503 -2 1118 241 15 25 chr2 130555120 130555235 -120132619 - L1MC3 LINE L1 -743 5821 5706 2318 42 38 0 chr2 130555235 130555523 -120132331 + AluY SINE Alu 2 300 -11 1118 241 15 25 chr2 130555523 130556007 -120131847 - L1MC3 LINE L1 -858 5706 5400 1783 230 22 11 chr2 130556053 130556505 -120131349 + LTR53 LTR ERVL 1 457 -62 1518 232 82 20 chr2 130556510 130557071 -120130783 - L1MC3 LINE L1 -1206 5358 4763 835 250 135 0 chr2 130557078 130557374 -120130480 + MER2 DNA MER2_type 1 336 -9 3722 256 47 53 chr2 130557377 130558344 -120129510 - L1MC3 LINE L1 -1810 4754 3783 312 27 0 0 chr2 130558344 130558381 -120129473 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1884 130 14 4 chr2 130558383 130558660 -120129194 - AluSc SINE Alu -29 280 1 3722 256 47 53 chr2 130558660 130559605 -120128249 - L1MC3 LINE L1 -2782 3782 2850 301 297 72 0 chr2 130559639 130559750 -120128104 - L1MC3 LINE L1 -4259 2486 2368 6963 148 42 18 chr2 130559757 130562092 -120125762 - L1MA7 LINE L1 0 6291 3895 1567 225 178 32 chr2 130562080 130562279 -120125575 - L1MC3 LINE L1 -4251 2313 2144 * 1570 194 26 13 chr2 130562279 130562583 -120125271 + AluJo SINE Alu 1 308 -4 1567 225 178 32 chr2 130562583 130563576 -120124278 - L1MC3 LINE L1 -4420 2144 765 264 59 0 0 chr2 130563628 130563662 -120124192 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 325 137 0 0 chr2 130563666 130563717 -120124137 - AluSg/x SINE Alu -44 256 206 658 282 23 5 chr2 130563717 130563937 -120123917 + L1MCb LINE L1 268 491 -5554 228 194 48 32 chr2 130564040 130564102 -120123752 - L1MC3 LINE L1 -5347 698 636 979 284 32 52 chr2 130564163 130564356 -120123498 - L1MC3 LINE L1 -5514 531 336 2157 120 13 3 chr2 130564356 130564665 -120123189 + AluSx SINE Alu 1 312 0 979 284 32 52 chr2 130564665 130565007 -120122847 - L1MC3 LINE L1 -5709 336 7 241 342 37 11 chr2 130565862 130566049 -120121805 + LTR16B LTR ERVL 132 323 -141 23 0 0 0 chr2 130567122 130567145 -120120709 + AT_rich Low_complexity Low_complexity 1 23 0 336 24 0 0 chr2 130567234 130567275 -120120579 + (CA)n Simple_repeat Simple_repeat 2 42 0 183 100 0 0 chr2 130567275 130567305 -120120549 + (GA)n Simple_repeat Simple_repeat 1 30 0 2221 109 3 0 chr2 130567574 130567867 -120119987 - AluSx SINE Alu -12 300 7 215 280 144 38 chr2 130568558 130568690 -120119164 - MIR SINE MIR -70 192 47 1883 96 0 4 chr2 130568709 130568958 -120118896 - AluSc SINE Alu -61 248 1 294 340 117 0 chr2 130568985 130569147 -120118707 + MER5A DNA MER1_type 1 181 -8 39709 58 4 1 chr2 130569547 130575670 -120112184 - L1PA5 LINE L1 0 6154 11 639 268 43 12 chr2 130576918 130577082 -120110772 + MIR SINE MIR 2 170 -92 339 290 48 28 chr2 130577088 130577233 -120110621 - MLT1G LTR MaLR -7 560 413 634 280 71 23 chr2 130577343 130577636 -120110218 - MLT1G LTR MaLR -305 289 1 251 209 30 15 chr2 130577639 130577706 -120110148 + MIR SINE MIR 169 236 -26 200 277 21 32 chr2 130578123 130578217 -120109637 + MIR SINE MIR 26 118 -90 853 205 20 1 chr2 130579035 130579349 -120108505 + MER89 LTR ERV1 180 531 -28 1098 274 65 40 chr2 130579733 130580303 -120107551 - HAL1b LINE L1 -24 1324 741 342 285 99 34 chr2 130580496 130580759 -120107095 + L1ME3A LINE L1 5681 5960 -210 891 112 8 0 chr2 130581240 130581365 -120106489 + MSTA LTR MaLR 1 126 -302 758 41 0 52 chr2 130581366 130581463 -120106391 + MER30B DNA MER1_type 4 95 -95 3500 79 4 0 chr2 130581483 130581939 -120105915 - L1PA10 LINE L1 -175 5993 5536 2401 51 0 14 chr2 130582001 130582330 -120105524 - AluY SINE Alu 0 311 1 2141 131 3 0 chr2 130582748 130583060 -120104794 - AluSq SINE Alu 0 313 1 295 350 54 0 chr2 130583222 130583380 -120104474 - MIR SINE MIR -50 212 48 214 95 48 0 chr2 130584758 130584800 -120103054 + GA-rich Low_complexity Low_complexity 1 44 0 2003 184 18 8 chr2 130585065 130585451 -120102403 + MLT1B LTR MaLR 1 390 0 1545 166 7 18 chr2 130585754 130586037 -120101817 - L1MA6 LINE L1 -272 6028 5749 372 277 58 68 chr2 130586055 130586261 -120101593 - L1M4b LINE L1 -6464 395 192 932 77 35 42 chr2 130586298 130586441 -120101413 - THE1C LTR MaLR 0 375 234 337 65 0 0 chr2 130586448 130586494 -120101360 - L1PA5 LINE L1 0 6154 6109 325 161 0 0 chr2 130586494 130586550 -120101304 - THE1C LTR MaLR -372 56 1 1384 158 25 8 chr2 130586550 130586791 -120101063 - LOR1b LTR ERV1 -168 293 49 1882 129 17 63 chr2 130586791 130587139 -120100715 - LTR10E LTR ERV1 -81 552 221 22 0 0 0 chr2 130587153 130587175 -120100679 + AT_rich Low_complexity Low_complexity 1 22 0 657 298 34 34 chr2 130587209 130587531 -120100323 + L1M4b LINE L1 613 934 -5925 4125 156 41 11 chr2 130587752 130588463 -120099391 + Tigger1 DNA MER2_type 1 732 -1686 1758 107 0 8 chr2 130588466 130588718 -120099136 - Tigger1 DNA MER2_type -1079 1339 1090 10083 121 32 31 chr2 130588748 130590061 -120097793 + Tigger1 DNA MER2_type 734 2051 -367 18153 33 0 0 chr2 130590061 130592957 -120094897 + L1PA3 LINE L1 3257 6152 -3 10083 121 32 31 chr2 130592957 130593324 -120094530 + Tigger1 DNA MER2_type 2051 2416 -2 2560 256 39 35 chr2 130593609 130594826 -120093028 + L1M4b LINE L1 1205 2414 -4545 2227 256 105 25 chr2 130595014 130596300 -120091554 + L1M4b LINE L1 2473 3808 -3149 469 271 110 14 chr2 130596345 130596563 -120091291 + HAL1 LINE L1 762 1000 -1507 2275 116 0 0 chr2 130596717 130597018 -120090836 - AluSx SINE Alu -11 301 1 2040 193 107 13 chr2 130597122 130597579 -120090275 - MLT1D LTR MaLR 0 505 6 212 339 64 9 chr2 130597612 130597721 -120090133 - L2 LINE L2 -19 3253 3139 368 312 25 25 chr2 130600221 130600378 -120087476 - MIR SINE MIR -59 203 47 26 50 0 0 chr2 130600607 130600647 -120087207 + AT_rich Low_complexity Low_complexity 1 40 0 2702 42 0 0 chr2 130600648 130600956 -120086898 - AluY SINE Alu -3 308 1 1162 107 0 0 chr2 130601540 130601690 -120086164 + AluSq/x SINE Alu 1 150 -163 871 278 128 36 chr2 130601692 130602445 -120085409 - L1M4 LINE L1 -837 5309 4488 887 295 12 22 chr2 130602457 130602776 -120085078 + MLT2C1 LTR ERVL 14 329 -68 230 250 14 14 chr2 130602972 130603044 -120084810 - L1MDa LINE L1 -4554 1986 1915 591 301 31 9 chr2 130603068 130603294 -120084560 - L1ME3A LINE L1 -48 6122 5892 337 349 41 14 chr2 130603928 130604146 -120083708 - L2 LINE L2 -353 2961 2738 1629 205 2 75 chr2 130605452 130605975 -120081879 - MER31A LTR ERV1 0 485 1 386 217 50 50 chr2 130605979 130606099 -120081755 + MER3 DNA MER1_type 69 188 -21 2275 97 23 3 chr2 130606265 130606564 -120081290 - AluSx SINE Alu -7 305 1 312 264 11 0 chr2 130606607 130606694 -120081160 + MER103 DNA DNA 8 95 -71 1566 266 10 2 chr2 130607438 130607837 -120080017 + MLT1A2-int LTR MaLR 1328 1729 -6 1488 214 5 57 chr2 130607840 130608209 -120079645 + MLT1A2 LTR MaLR 1 350 -24 352 327 39 13 chr2 130609561 130609714 -120078140 + MIR SINE MIR 36 192 -70 400 291 91 15 chr2 130610191 130610390 -120077464 + MIR SINE MIR 31 244 -18 304 339 0 32 chr2 130611346 130611470 -120076384 - MIR SINE MIR -115 147 28 180 304 36 0 chr2 130612502 130612558 -120075296 - MIR SINE MIR -66 142 85 181 346 47 31 chr2 130613059 130613186 -120074668 + L2 LINE L2 3132 3260 -12 219 247 88 122 chr2 130613480 130613957 -120073897 - L2 LINE L2 -337 2977 2517 267 79 0 0 chr2 130614600 130614638 -120073216 + (ATTTG)n Simple_repeat Simple_repeat 5 42 0 686 215 65 50 chr2 130615732 130615932 -120071922 + L1MD1 LINE L1 21 223 -6317 590 138 28 0 chr2 130615950 130616059 -120071795 + L1MD1 LINE L1 2485 2596 -3944 * 6187 230 64 33 chr2 130616055 130619333 -120068521 + L1MD1 LINE L1 3251 6636 0 433 184 64 80 chr2 130620783 130620922 -120066932 + MLT1H LTR MaLR 405 545 -4 2439 81 0 3 chr2 130621073 130621382 -120066472 - AluY SINE Alu -3 308 1 180 388 51 0 chr2 130621890 130621988 -120065866 + L2 LINE L2 3154 3256 -16 234 265 69 69 chr2 130622020 130622122 -120065732 - L2 LINE L2 -4 3309 3208 357 149 0 68 chr2 130623167 130623241 -120064613 - LTR16C LTR ERVL -15 476 408 330 238 0 62 chr2 130623306 130623355 -120064499 - LTR16C LTR ERVL -223 268 224 1699 200 133 36 chr2 130623355 130623860 -120063994 + MLT2B3 LTR ERVL 1 554 0 330 238 0 62 chr2 130623860 130623890 -120063964 - LTR16C LTR ERVL -267 224 194 351 60 0 0 chr2 130623890 130623940 -120063914 + (TG)n Simple_repeat Simple_repeat 2 51 0 822 89 15 7 chr2 130624111 130624246 -120063608 + (TCTA)n Simple_repeat Simple_repeat 2 137 0 22 0 0 0 chr2 130624330 130624352 -120063502 + AT_rich Low_complexity Low_complexity 1 22 0 872 240 126 81 chr2 130624567 130625354 -120062500 - HAL1 LINE L1 -33 2474 1653 2117 94 3 0 chr2 130625387 130625673 -120062181 + L1PB1 LINE L1 5505 5791 -360 262 131 16 16 chr2 130625678 130625739 -120062115 - LTR66 LTR ERVL -171 439 379 212 122 24 0 chr2 130625739 130625780 -120062074 + (TA)n Simple_repeat Simple_repeat 2 43 0 2663 92 3 3 chr2 130625786 130626155 -120061699 + L1PB1 LINE L1 5782 6150 -1 2059 297 61 20 chr2 130626192 130627206 -120060648 - HAL1 LINE L1 -867 1640 585 354 309 36 22 chr2 130627292 130627431 -120060423 + HAL1 LINE L1 188 328 -2179 1527 188 21 73 chr2 130628180 130628564 -120059290 + MLT1A1 LTR MaLR 2 365 0 2263 123 0 0 chr2 130629051 130629361 -120058493 - AluSg SINE Alu 0 310 1 406 319 22 22 chr2 130629448 130629630 -120058224 - L1ME LINE L1 -400 5721 5540 185 356 127 8 chr2 130629990 130630108 -120057746 - L2 LINE L2 -18 3254 3123 232 273 156 0 chr2 130630249 130630326 -120057528 - MIR SINE MIR -66 196 108 1406 88 73 15 chr2 130631196 130631400 -120056454 + AluSg SINE Alu 1 216 -94 1416 93 0 212 chr2 130631400 130631745 -120056109 + LTR12 LTR ERV1 13 284 -430 237 209 174 0 chr2 130631745 130631831 -120056023 + LTR30 LTR ERV1 552 652 -70 635 158 0 0 chr2 130631834 130631929 -120055925 + LTR12 LTR ERV1 487 581 -133 626 133 0 0 chr2 130631929 130632027 -120055827 + AluSg SINE Alu 203 300 -9 221 318 79 16 chr2 130632060 130632186 -120055668 - L2 LINE L2 0 3272 3139 318 219 14 0 chr2 130632351 130632424 -120055430 - MER116 DNA Mariner 0 80 7 248 301 113 34 chr2 130634653 130634892 -120052962 - L2 LINE L2 -456 2858 2601 226 374 10 0 chr2 130635208 130635307 -120052547 - L2 LINE L2 -784 2530 2431 447 221 19 0 chr2 130636425 130636583 -120051271 + GA-rich Low_complexity Low_complexity 2 162 0 988 110 7 0 chr2 130636584 130636720 -120051134 + AluSp SINE Alu 7 143 -170 1178 78 7 0 chr2 130636823 130636977 -120050877 + AluSp SINE Alu 121 275 -38 188 195 24 24 chr2 130636977 130637059 -120050795 + GA-rich Low_complexity Low_complexity 1 82 0 284 292 0 11 chr2 130637161 130637273 -120050581 - MIR SINE MIR -72 136 28 398 306 19 19 chr2 130637584 130637741 -120050113 - L2 LINE L2 -915 2399 2243 229 237 13 40 chr2 130637846 130637922 -120049932 + MIR SINE MIR 175 248 -14 4418 201 39 20 chr2 130637939 130638055 -120049799 - L1MA9 LINE L1 -28 6284 6172 243 0 0 0 chr2 130638055 130638082 -120049772 + (TG)n Simple_repeat Simple_repeat 1 27 0 4418 201 39 20 chr2 130638082 130639710 -120048144 - L1MA9 LINE L1 -140 6172 4509 321 304 147 60 chr2 130640151 130640553 -120047301 + L2 LINE L2 2836 3272 0 263 331 121 35 chr2 130641737 130642027 -120045827 + L2 LINE L2 2586 2900 -414 918 263 107 43 chr2 130642694 130643113 -120044741 + MLT1J1 LTR MaLR 1 446 0 1815 159 3 0 chr2 130644482 130644772 -120043082 + AluSx SINE Alu 1 291 -21 281 308 0 0 chr2 130644777 130644868 -120042986 + A-rich Low_complexity Low_complexity 1 91 0 562 127 8 71 chr2 130645639 130645718 -120042136 - L1PA15 LINE L1 0 6165 6083 2065 135 72 23 chr2 130645718 130646065 -120041789 + THE1B LTR MaLR 1 364 0 11390 95 26 3 chr2 130646065 130647609 -120040245 + THE1B-int LTR MaLR 1 1580 0 1976 137 84 26 chr2 130647610 130647953 -120039901 + THE1B LTR MaLR 2 364 0 562 127 8 71 chr2 130647953 130647996 -120039858 - L1PA15 LINE L1 -80 6085 6048 733 150 0 38 chr2 130648438 130648571 -120039283 - FRAM SINE Alu -7 169 42 9722 220 31 23 chr2 130648573 130650277 -120037577 - L1P4 LINE L1 -665 5501 3766 1740 171 3 3 chr2 130650277 130650569 -120037285 - AluSx SINE Alu -18 294 3 9722 220 31 23 chr2 130650569 130651643 -120036211 - L1P4 LINE L1 -2400 3766 2701 346 205 26 13 chr2 130652966 130653044 -120034810 - MER117 DNA MER1_type -18 179 101 186 219 109 31 chr2 130653306 130653370 -120034484 - MIR SINE MIR -77 185 117 226 289 25 74 chr2 130655416 130655537 -120032317 + L1ME LINE L1 5479 5593 -528 887 274 59 28 chr2 130655846 130656236 -120031618 + L1MDb LINE L1 818 1219 -5190 1302 128 9 14 chr2 130657651 130657869 -120029985 + LOR1b-int LTR ERV1 4294 4510 -3610 * 3667 133 32 26 chr2 130657866 130658633 -120029221 + LOR1b-int LTR ERV1 4111 5247 -1054 1920 105 29 4 chr2 130658615 130658891 -120028963 + LOR1b-int LTR ERV1 5782 6064 -2056 * 562 132 11 11 chr2 130658890 130658981 -120028873 + LOR1b-int LTR ERV1 8030 8120 0 * 324 98 0 0 chr2 130658981 130659022 -120028832 + LOR1b LTR ERV1 1 41 -420 2024 102 13 33 chr2 130659146 130659451 -120028403 - AluY SINE Alu -12 299 1 3697 68 0 0 chr2 130659451 130659919 -120027935 + L1PA7 LINE L1 5685 6152 -2 616 163 78 0 chr2 130659922 130660051 -120027803 + L1M LINE L1 5279 5417 -763 6186 91 48 2 chr2 130660056 130660917 -120026937 + L1P LINE L1 7 906 -5240 360 164 0 0 chr2 130661142 130661209 -120026645 + (TCCA)n Simple_repeat Simple_repeat 4 70 0 707 209 0 6 chr2 130661229 130661406 -120026448 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 583 237 13 13 chr2 130664246 130664402 -120023452 + L1MC3 LINE L1 7629 7784 -1 591 143 10 10 chr2 130664413 130664511 -120023343 + AluSc SINE Alu 2 99 -210 339 351 33 7 chr2 130664687 130664838 -120023016 - MIR SINE MIR -79 183 29 1681 198 31 25 chr2 130665055 130665281 -120022573 - MER89 LTR ERV1 0 559 329 1574 216 58 6 chr2 130665281 130665628 -120022226 + MLT1A1 LTR MaLR 1 365 0 1681 198 31 25 chr2 130665628 130665760 -120022094 - MER89 LTR ERV1 -230 329 199 307 195 65 0 chr2 130665735 130665812 -120022042 - MER89 LTR ERV1 -470 89 8 * 183 300 207 43 chr2 130666208 130666348 -120021506 + MIR SINE MIR 30 192 -70 288 53 0 0 chr2 130666356 130666394 -120021460 + (TA)n Simple_repeat Simple_repeat 1 38 0 242 275 65 58 chr2 130666733 130666793 -120021061 + MER5B DNA MER1_type 3 61 -117 1475 222 61 25 chr2 130666793 130667153 -120020701 - MLT1A2 LTR MaLR -1 373 1 242 275 65 58 chr2 130667153 130667230 -120020624 + MER5B DNA MER1_type 61 141 -37 2175 106 7 0 chr2 130667574 130667876 -120019978 - AluSx SINE Alu -8 304 1 2190 105 3 0 chr2 130667901 130668207 -120019647 + AluY SINE Alu 1 307 -4 279 370 41 7 chr2 130668518 130668664 -120019190 - MIR3 SINE MIR -15 193 43 14681 135 87 39 chr2 130669312 130670148 -120017706 - L1M1 LINE L1 -4099 3466 2672 2075 97 13 17 chr2 130670148 130670446 -120017408 - AluY SINE Alu -14 297 1 14681 135 87 39 chr2 130670446 130672248 -120015606 - L1M1 LINE L1 -4893 2672 701 498 178 42 25 chr2 130672241 130672359 -120015495 - L1M1 LINE L1 -7427 138 19 * 400 267 48 34 chr2 130672967 130673113 -120014741 + MLT1I LTR MaLR 31 178 -231 572 168 0 0 chr2 130673113 130673214 -120014640 - AluSg/x SINE Alu -6 306 206 1678 138 41 22 chr2 130673225 130673544 -120014310 - L1MC3 LINE L1 0 7785 7461 594 204 35 47 chr2 130673538 130673710 -120014144 - L1MA10 LINE L1 -1 6333 6164 * 221 299 45 0 chr2 130674174 130674241 -120013613 - L2 LINE L2 -3 3269 3200 2217 97 7 0 chr2 130675375 130675712 -120012142 - AluSq SINE Alu 0 339 1 201 256 174 12 chr2 130677056 130677142 -120010712 + L2 LINE L2 3172 3271 -1 * 230 212 0 91 chr2 130677136 130677202 -120010652 - MIR SINE MIR -133 75 16 403 301 93 22 chr2 130677658 130677841 -120010013 + L1ME4a LINE L1 5743 5938 -183 1232 192 12 16 chr2 130677892 130678142 -120009712 - AluJo SINE Alu -9 303 55 1472 93 0 0 chr2 130678151 130678345 -120009509 - AluSc SINE Alu -5 304 111 10815 170 20 19 chr2 130678448 130682685 -120005169 + L1MA2 LINE L1 3503 7723 0 5404 142 46 19 chr2 130682728 130682913 -120004941 + L1MA9 LINE L1 5088 5266 -1046 216 0 0 0 chr2 130682913 130682937 -120004917 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 5404 142 46 19 chr2 130682937 130683934 -120003920 + L1MA9 LINE L1 5266 6308 -4 304 217 160 19 chr2 130684831 130684937 -120002917 - L2 LINE L2 0 3313 3193 242 259 75 75 chr2 130684948 130685095 -120002759 - L2 LINE L2 -22 3250 3104 2061 144 0 0 chr2 130686046 130686467 -120001387 + AluSx SINE Alu 14 434 0 1596 92 19 0 chr2 130687036 130687243 -120000611 - AluSq SINE Alu -16 297 87 2477 209 18 24 chr2 130687307 130687858 -119999996 + MER44D DNA MER2_type 3 605 0 316 296 71 10 chr2 130687859 130687957 -119999897 - L2 LINE L2 -23 3249 3146 1468 159 17 14 chr2 130689205 130689494 -119998360 - Tigger1 DNA MER2_type 0 2418 2129 * 3704 169 37 7 chr2 130689482 130690185 -119997669 - Tigger1 DNA MER2_type -1665 753 30 921 244 15 112 chr2 130690204 130690311 -119997543 - L1ME2 LINE L1 -27 6635 6519 2294 56 3 26 chr2 130690311 130690613 -119997241 + AluY SINE Alu 1 295 -16 921 244 15 112 chr2 130690613 130690993 -119996861 - L1ME2 LINE L1 -143 6519 6222 2453 73 0 3 chr2 130690993 130691296 -119996558 - AluY SINE Alu -9 302 1 921 244 15 112 chr2 130691296 130691404 -119996450 - L1ME2 LINE L1 -440 6222 6105 669 83 41 0 chr2 130691504 130691649 -119996205 + (TA)n Simple_repeat Simple_repeat 2 152 0 2431 70 15 18 chr2 130691672 130692015 -119995839 - L1PA7 LINE L1 -3 6151 5810 1412 168 12 81 chr2 130692053 130692387 -119995467 + MER57A LTR ERV1 77 387 -16 402 156 51 0 chr2 130692387 130692475 -119995379 - L1M1 LINE L1 -534 5650 5569 7633 252 34 20 chr2 130692482 130695393 -119992461 - L1ME2 LINE L1 -1005 5639 2683 1845 130 56 0 chr2 130695397 130695698 -119992156 - AluSx SINE Alu 0 316 1 411 288 79 9 chr2 130695791 130696121 -119991733 - L1ME2 LINE L1 -4004 2642 2290 3111 234 69 22 chr2 130696261 130697604 -119990250 - L1ME2 LINE L1 -4562 2084 666 2414 63 7 3 chr2 130697606 130697906 -119989948 - AluY SINE Alu -5 306 6 400 104 30 0 chr2 130698009 130698076 -119989778 - Alu SINE Alu -242 69 1 692 293 86 22 chr2 130698081 130698395 -119989459 - L1ME2 LINE L1 -5880 662 329 689 255 100 30 chr2 130698403 130698674 -119989180 - L1ME2 LINE L1 -6240 302 13 253 211 100 14 chr2 130700289 130700369 -119987485 + MIR SINE MIR 63 153 -55 21 0 0 0 chr2 130700780 130700801 -119987053 + AT_rich Low_complexity Low_complexity 1 21 0 426 282 16 85 chr2 130701334 130701522 -119986332 + MER5B DNA MER1_type 2 176 -2 1662 259 104 6 chr2 130701915 130702445 -119985409 - MLT1E2 LTR MaLR -5 621 40 757 244 37 58 chr2 130702548 130702589 -119985265 - L1ME LINE L1 -552 5614 5574 1955 118 6 37 chr2 130702589 130702910 -119984944 + AluSq SINE Alu 3 313 0 757 244 37 58 chr2 130702910 130703316 -119984538 - L1ME LINE L1 -592 5574 5176 661 196 38 106 chr2 130703317 130703552 -119984302 + L1MA9 LINE L1 5864 6082 -230 1120 135 0 0 chr2 130703552 130703744 -119984110 + AluSg/x SINE Alu 132 323 0 743 223 5 19 chr2 130703744 130703950 -119983904 + L1MA9 LINE L1 6071 6273 -39 1379 230 32 9 chr2 130704004 130704347 -119983507 - MLT1A1 LTR MaLR 0 365 15 894 238 60 35 chr2 130704393 130704712 -119983142 - L1ME LINE L1 -1062 5084 4758 1121 219 60 3 chr2 130704730 130705081 -119982773 - L1M4 LINE L1 -846 5300 4930 610 48 0 0 chr2 130705099 130705183 -119982671 + MER2 DNA MER2_type 127 210 -135 2127 113 0 3 chr2 130705254 130705566 -119982288 + AluSq SINE Alu 1 311 0 880 265 39 19 chr2 130705611 130705973 -119981881 - L1M4 LINE L1 -1228 4918 4550 558 342 53 27 chr2 130705971 130706445 -119981409 - L1ME LINE L1 -5493 577 92 * 1068 211 19 101 chr2 130706526 130706668 -119981186 - MER2 DNA MER2_type 0 344 192 2300 75 10 0 chr2 130706668 130706961 -119980893 + AluSx SINE Alu 1 296 -16 1068 211 19 101 chr2 130706961 130707193 -119980661 - MER2 DNA MER2_type -152 192 1 445 266 92 13 chr2 130707205 130707434 -119980420 - L1MEc LINE L1 -3418 2797 2551 237 222 56 74 chr2 130707436 130707475 -119980379 - L1MC2 LINE L1 -1 6343 6305 2431 67 0 0 chr2 130707475 130707772 -119980082 + AluY SINE Alu 1 297 -14 237 222 56 74 chr2 130707772 130707840 -119980014 - L1MC2 LINE L1 -39 6305 6238 259 207 0 0 chr2 130707859 130707917 -119979937 - L1MEc LINE L1 -3786 2429 2372 1260 240 72 34 chr2 130707917 130708514 -119979340 - MLT1E3 LTR MaLR 0 624 27 691 258 47 31 chr2 130708536 130708896 -119978958 - L1MEc LINE L1 -4206 2190 1825 738 217 99 5 chr2 130708914 130709135 -119978719 - MER96B DNA MER1_type? -174 243 2 4890 149 25 17 chr2 130710883 130711633 -119976221 - L1PB3 LINE L1 0 6154 5389 2159 68 11 7 chr2 130711633 130711946 -119975908 - AluY SINE Alu 0 314 1 4890 149 25 17 chr2 130711946 130712322 -119975532 - L1PB3 LINE L1 -765 5389 5017 30591 121 22 17 chr2 130712426 130718034 -119969820 - L1P2 LINE L1 -508 5646 12 1212 175 70 37 chr2 130718047 130718327 -119969527 - L1M4 LINE L1 -850 5296 5000 2041 145 3 0 chr2 130718327 130718651 -119969203 - AluSx SINE Alu 0 312 1 1212 175 70 37 chr2 130718651 130718725 -119969129 - L1M4 LINE L1 -1146 5000 4930 1848 168 35 3 chr2 130718728 130719073 -119968781 + L1MB3 LINE L1 5438 5793 -378 1041 170 28 5 chr2 130719135 130719353 -119968501 + L1MB3 LINE L1 5959 6181 -2 3872 201 21 23 chr2 130719359 130720016 -119967838 + L1MB8 LINE L1 4316 4973 -1205 2355 78 0 3 chr2 130720016 130720312 -119967542 + AluY SINE Alu 16 310 -1 3872 201 21 23 chr2 130720312 130721414 -119966440 + L1MB8 LINE L1 4973 6072 -106 483 167 42 0 chr2 130721472 130721568 -119966286 + L1MB7 LINE L1 6076 6175 -9 22 0 0 0 chr2 130722457 130722479 -119965375 + AT_rich Low_complexity Low_complexity 1 22 0 186 355 65 40 chr2 130724121 130724245 -119963609 + L2 LINE L2 3145 3271 -1 315 203 96 35 chr2 130724812 130724963 -119962891 + MIR SINE MIR 1 160 -63 222 256 61 12 chr2 130725227 130725391 -119962463 + (TA)n Simple_repeat Simple_repeat 1 172 0 256 150 0 0 chr2 130725783 130725823 -119962031 - L1MC1 LINE L1 -232 6101 6062 531 244 0 3 chr2 130726224 130726806 -119961048 + (TG)n Simple_repeat Simple_repeat 1 579 0 534 222 0 0 chr2 130726832 130726999 -119960855 + (TG)n Simple_repeat Simple_repeat 1 167 0 200 277 0 0 chr2 130727011 130727058 -119960796 + (TG)n Simple_repeat Simple_repeat 2 48 0 194 296 23 45 chr2 130729148 130729236 -119958618 - MIR SINE MIR -84 124 39 256 294 71 63 chr2 130732319 130732557 -119955297 + MER89-int LTR ERV1 3492 3731 -5188 421 297 60 58 chr2 130733013 130733393 -119954461 + MER89-int LTR ERV1 3686 4066 -4360 442 345 51 36 chr2 130733473 130734081 -119953773 + MER89-int LTR ERV1 3377 4984 -2772 709 181 0 16 chr2 130734123 130734250 -119953604 + LTR24 LTR ERV1 343 467 0 235 221 125 10 chr2 130734317 130734421 -119953433 + L1ME4a LINE L1 5966 6081 -40 58 54 0 0 chr2 130734528 130734621 -119953233 + AT_rich Low_complexity Low_complexity 1 93 0 550 203 74 41 chr2 130735149 130735361 -119952493 + LTR45B LTR ERV1 331 489 0 254 310 0 0 chr2 130735414 130735501 -119952353 - L1ME LINE L1 -5946 124 38 321 211 40 13 chr2 130735567 130735643 -119952211 - L1ME LINE L1 -447 5723 5646 1384 282 118 27 chr2 130735710 130736948 -119950906 - L1ME LINE L1 -521 5641 4297 565 273 130 41 chr2 130737400 130738404 -119949450 - L1ME LINE L1 -1857 4289 3063 4829 146 29 29 chr2 130738732 130739635 -119948219 + MER4D LTR ERV1 1 903 0 821 237 98 36 chr2 130739672 130740092 -119947762 - L1ME LINE L1 -562 5600 5160 196 349 47 23 chr2 130740251 130740380 -119947474 - MIR SINE MIR -9 253 122 2396 98 3 0 chr2 130740836 130741143 -119946711 - AluSp SINE Alu -5 308 1 227 208 14 56 chr2 130741558 130741630 -119946224 + L2 LINE L2 2225 2293 -1021 219 69 0 0 chr2 130742041 130742070 -119945784 + (T)n Simple_repeat Simple_repeat 1 29 0 855 238 34 19 chr2 130742734 130742940 -119944914 - MIR SINE MIR -46 216 8 1163 154 63 144 chr2 130743185 130743582 -119944272 - LTR49 LTR ERV1 -230 365 1 1195 154 23 5 chr2 130744431 130744645 -119943209 + L1MA8 LINE L1 6071 6288 -3 528 290 0 0 chr2 130744667 130744798 -119943056 - L1MB7 LINE L1 -57 6127 5997 391 198 138 9 chr2 130744798 130744914 -119942940 - L1MB7 LINE L1 -408 5776 5646 449 147 13 0 chr2 130744916 130744989 -119942865 + MER57A LTR ERV1 8 81 -322 1666 178 83 26 chr2 130744989 130745454 -119942400 - LTR29 LTR ERV1 0 608 137 780 81 37 0 chr2 130745521 130745682 -119942172 + (TA)n Simple_repeat Simple_repeat 1 167 0 500 161 11 0 chr2 130745785 130745872 -119941982 - AluSg/x SINE Alu -15 294 207 10456 145 34 7 chr2 130745872 130748921 -119938933 - L1PBa LINE L1 -2423 4439 1307 421 119 0 0 chr2 130748925 130749050 -119938804 - L1PBa LINE L1 -5701 1162 995 323 229 0 0 chr2 130749050 130749120 -119938734 - L1PBa LINE L1 -6669 194 125 36 0 0 0 chr2 130749131 130749167 -119938687 + AT_rich Low_complexity Low_complexity 1 36 0 4897 200 70 13 chr2 130749167 130750747 -119937107 - L1PBa LINE L1 -3785 3077 1403 547 274 7 0 chr2 130750785 130750938 -119936916 - L1PBa LINE L1 -6707 156 3 980 258 17 43 chr2 130751145 130751444 -119936410 + L1MC4 LINE L1 6704 6994 -1048 503 276 64 31 chr2 130751866 130752385 -119935469 + L1MC5 LINE L1 7268 7711 -250 2282 78 7 0 chr2 130752923 130753206 -119934648 + AluY SINE Alu 1 285 -26 2942 137 51 2 chr2 130753228 130753702 -119934152 + LOR1a LTR ERV1 1 497 0 15512 151 58 63 chr2 130753702 130757561 -119930293 + LOR1a-int LTR ERV1 1 3836 -4284 3068 143 4 2 chr2 130757663 130758139 -119929715 + LOR1a LTR ERV1 21 497 0 281 248 184 21 chr2 130758211 130758352 -119929502 + MLT1J2 LTR MaLR 45 208 -242 250 237 79 13 chr2 130758437 130758513 -119929341 + MLT1I LTR MaLR 327 407 -2 1673 205 0 9 chr2 130759229 130759561 -119928293 + L1MC3 LINE L1 6420 6748 -1037 4603 257 65 22 chr2 130759619 130762465 -119925389 - L1MEc LINE L1 -2029 4535 1565 1151 265 68 26 chr2 130762458 130762873 -119924981 - L1MEc LINE L1 -5219 826 395 * 1039 301 14 14 chr2 130762874 130763219 -119924635 - L1MEc LINE L1 -5698 347 3 21 0 0 0 chr2 130763428 130763449 -119924405 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 130763823 130763847 -119924007 + AT_rich Low_complexity Low_complexity 1 24 0 1756 245 57 25 chr2 130764311 130765011 -119922843 - L1M4 LINE L1 -3372 3010 2289 1413 142 0 5 chr2 130765011 130765216 -119922638 - AluJb SINE Alu -108 204 1 196 309 65 32 chr2 130765216 130765339 -119922515 + MIR SINE MIR 101 227 -35 259 363 86 25 chr2 130765890 130766215 -119921639 + L2 LINE L2 2632 2976 -338 3683 123 128 2 chr2 130767288 130767899 -119919955 - LTR12 LTR ERV1 0 688 1 412 191 99 48 chr2 130767976 130768248 -119919606 - pTR5 LTR ERV1 -1410 1028 743 3967 193 26 32 chr2 130768716 130769612 -119918242 + L1MB4 LINE L1 5279 6168 -12 3371 243 47 16 chr2 130769623 130770819 -119917035 + L1M4 LINE L1 2272 3504 -2642 5187 162 32 44 chr2 130770823 130772825 -119915029 + L1PB3 LINE L1 4196 6152 -2 23 33 0 0 chr2 130772825 130772855 -119914999 + AT_rich Low_complexity Low_complexity 1 30 0 603 119 10 0 chr2 130772855 130772956 -119914898 + L1 LINE L1 4570 4671 -1475 567 293 45 16 chr2 130772959 130773205 -119914649 + L1M4 LINE L1 3532 3784 -2362 1942 130 23 16 chr2 130773205 130773512 -119914342 + AluSx SINE Alu 1 309 -3 255 91 0 0 chr2 130773512 130773545 -119914309 + (GA)n Simple_repeat Simple_repeat 1 33 0 655 100 23 23 chr2 130773545 130773675 -119914179 + (GGAA)n Simple_repeat Simple_repeat 4 133 0 2043 142 3 0 chr2 130773712 130774021 -119913833 + AluSg SINE Alu 1 310 0 2106 233 70 89 chr2 130774031 130774258 -119913596 + L1M4 LINE L1 3797 4027 -2119 1888 201 49 7 chr2 130774258 130774666 -119913188 + MSTB LTR MaLR 1 425 -1 2106 233 70 89 chr2 130774666 130775090 -119912764 + L1M4 LINE L1 4027 4458 -1688 251 28 28 0 chr2 130775090 130775126 -119912728 + (TA)n Simple_repeat Simple_repeat 1 37 0 2106 233 70 89 chr2 130775126 130775766 -119912088 + L1M4 LINE L1 4458 5064 -1082 2803 68 8 0 chr2 130775813 130776193 -119911661 - L1PA7 LINE L1 -3 6151 5769 34034 47 0 0 chr2 130776193 130781221 -119906633 - L1PA4 LINE L1 -4 6151 1123 2195 109 3 3 chr2 130781323 130781625 -119906229 - AluSq SINE Alu -11 302 1 880 169 24 63 chr2 130781644 130781851 -119906003 + L1MB1 LINE L1 5967 6165 -3 1241 212 121 3 chr2 130781876 130782182 -119905672 - L1MC3 LINE L1 -338 7447 7106 296 244 105 12 chr2 130782223 130782309 -119905545 + MLT1I LTR MaLR 316 409 0 21 0 0 0 chr2 130782420 130782441 -119905413 + AT_rich Low_complexity Low_complexity 1 21 0 390 347 20 7 chr2 130783064 130783211 -119904643 - MIR SINE MIR -107 155 7 245 293 189 42 chr2 130783671 130783883 -119903971 + L2 LINE L2 3026 3268 -4 2660 252 64 33 chr2 130784280 130785457 -119902397 + L1MDb LINE L1 410 1585 -4821 304 237 66 0 chr2 130785462 130785538 -119902316 + L1MDb LINE L1 3298 3378 -3028 1630 245 40 42 chr2 130785540 130786161 -119901693 + L1MDb LINE L1 4406 5025 -1381 581 238 44 33 chr2 130786179 130786360 -119901494 + L1MDb LINE L1 5359 5541 -865 230 295 36 45 chr2 130786652 130786764 -119901090 - L2 LINE L2 0 3313 3203 350 311 60 35 chr2 130788688 130789054 -119898800 - LTR16C LTR ERVL -10 481 107 199 259 74 0 chr2 130789365 130789419 -119898435 + L3 LINE CR1 1308 1365 -212 184 316 79 0 chr2 130790092 130790168 -119897686 + L2 LINE L2 3141 3222 -50 292 268 40 39 chr2 130790946 130791091 -119896763 + MIR SINE MIR 34 175 -62 4526 254 107 47 chr2 130791262 130791838 -119896016 + L1MEc LINE L1 36 576 -5820 2313 97 7 0 chr2 130791838 130792138 -119895716 + AluSp SINE Alu 1 302 -11 4526 254 107 47 chr2 130792138 130793007 -119894847 + L1MEc LINE L1 576 1391 -5005 1420 239 61 6 chr2 130793007 130793350 -119894504 + MLT1A1 LTR MaLR 1 362 -3 4526 254 107 47 chr2 130793350 130793429 -119894425 + L1MEc LINE L1 1391 1464 -4932 1722 118 159 110 chr2 130793429 130793837 -119894017 + MSTA LTR MaLR 1 428 0 4526 254 107 47 chr2 130793837 130794586 -119893268 + L1MEc LINE L1 1464 2448 -3948 212 242 257 22 chr2 130797071 130797198 -119890656 + MER5A DNA MER1_type 18 161 -17 199 275 87 29 chr2 130799055 130799124 -119888730 - MIR SINE MIR -73 189 117 829 244 26 5 chr2 130799197 130799390 -119888464 - MLT1A1 LTR MaLR 0 365 169 2791 254 32 40 chr2 130799392 130800351 -119887503 + L1M4 LINE L1 4439 5390 -756 1271 254 108 33 chr2 130800354 130800902 -119886952 + L1MEc LINE L1 1597 2185 -4211 953 210 48 53 chr2 130800919 130801314 -119886540 + L1MEc LINE L1 2213 2605 -3610 3237 253 56 38 chr2 130801384 130802625 -119885229 + L1MEc LINE L1 3145 4408 -1807 199 275 87 29 chr2 130804158 130804227 -119883627 - MIR SINE MIR -73 189 117 1834 210 19 11 chr2 130804300 130804662 -119883192 - MLT1A1 LTR MaLR 0 365 1 334 232 11 177 chr2 130805645 130805826 -119882028 + L1MEc LINE L1 360 510 -6211 5162 260 53 26 chr2 130805826 130809029 -119878825 + L1MEc LINE L1 867 5784 -756 1271 254 108 33 chr2 130809032 130809580 -119878274 + L1MEc LINE L1 1597 2185 -4211 953 210 48 53 chr2 130809597 130809992 -119877862 + L1MEc LINE L1 2213 2605 -3610 3236 254 56 38 chr2 130810062 130811322 -119876532 + L1MEc LINE L1 3145 4427 -1788 2090 145 0 0 chr2 130812660 130812964 -119874890 - AluSx SINE Alu -5 307 4 685 222 42 49 chr2 130813046 130813334 -119874520 - L1ME2 LINE L1 0 6164 5879 1220 223 65 24 chr2 130813336 130813576 -119874278 - L1ME2 LINE L1 -504 5662 5433 7574 202 126 12 chr2 130813576 130815151 -119872703 - MER52A LTR ERV1 -1 1754 1 1220 223 65 24 chr2 130815151 130815431 -119872423 - L1ME2 LINE L1 -733 5433 5132 * 4865 216 118 102 chr2 130815423 130815877 -119871977 - L1MD3 LINE L1 -130 7865 7420 587 234 0 8 chr2 130815877 130816001 -119871853 - MLT1A1 LTR MaLR -442 125 3 4865 216 118 102 chr2 130816001 130817194 -119870660 - L1MD3 LINE L1 -575 7420 6047 824 184 18 24 chr2 130817194 130817362 -119870492 - L1MD2 LINE L1 0 6359 6193 4865 216 118 102 chr2 130817362 130817877 -119869977 - L1MD3 LINE L1 -1948 6047 5542 180 0 0 0 chr2 130818144 130818164 -119869690 + (A)n Simple_repeat Simple_repeat 1 20 0 1285 170 5 5 chr2 130818452 130818670 -119869184 - AluSg/x SINE Alu -5 307 90 381 287 20 14 chr2 130818860 130819013 -119868841 + L1ME3A LINE L1 5452 5602 -574 339 230 80 53 chr2 130819014 130819127 -119868727 + L1ME3A LINE L1 5769 5884 -286 461 324 17 6 chr2 130819837 130820013 -119867841 + MIR SINE MIR 72 249 -13 203 277 0 43 chr2 130820434 130820528 -119867326 + CT-rich Low_complexity Low_complexity 4 93 0 22 70 0 0 chr2 130822255 130822298 -119865556 + GC_rich Low_complexity Low_complexity 1 43 0 2073 110 10 3 chr2 130823554 130823853 -119864001 - AluSp SINE Alu -12 301 1 3162 186 31 58 chr2 130823853 130824779 -119863075 + L1MC3 LINE L1 6716 7778 -7 366 290 37 56 chr2 130824832 130825101 -119862753 + L1M4 LINE L1 4083 4346 -1800 227 239 33 0 chr2 130825112 130825204 -119862650 + (TA)n Simple_repeat Simple_repeat 1 95 0 742 235 174 27 chr2 130825525 130825819 -119862035 - MLT1E LTR MaLR -256 337 1 349 71 0 0 chr2 130825897 130825939 -119861915 - L1P4 LINE L1 -572 5596 5555 3389 52 15 0 chr2 130825939 130826342 -119861512 + L1PA8 LINE L1 5759 6169 -3 1301 183 24 29 chr2 130826442 130826894 -119860960 - L1MC/D LINE L1 -717 5594 5137 2034 249 70 63 chr2 130826909 130828015 -119859839 - L1MC/D LINE L1 -2052 4163 3051 * 2409 289 78 37 chr2 130828008 130830653 -119857201 - L1MEc LINE L1 -3401 2814 95 753 149 9 9 chr2 130831492 130831606 -119856248 + AluSq/x SINE Alu 2 115 -198 188 354 0 0 chr2 130831774 130831822 -119856032 + L2 LINE L2 3210 3257 -15 893 281 140 36 chr2 130832752 130833329 -119854525 - MLT2F LTR ERVL 0 663 27 213 236 0 18 chr2 130834266 130834321 -119853533 - L2 LINE L2 0 3272 3219 1528 221 63 89 chr2 130834366 130834981 -119852873 - MER77 LTR ERV1 -2 603 5 1191 178 70 12 chr2 130835320 130835568 -119852286 + MLT1C LTR MaLR 205 542 0 204 317 83 25 chr2 130836502 130836622 -119851232 - L2 LINE L2 -5 3267 3141 2188 115 6 13 chr2 130836946 130837260 -119850594 - AluSx SINE Alu 0 312 1 306 211 74 19 chr2 130838340 130838469 -119849385 - LTR50 LTR ERVL -88 641 298 280 366 124 34 chr2 130838789 130839087 -119848767 + L2 LINE L2 2948 3272 0 375 296 143 8 chr2 130839662 130839914 -119847940 + MLT1H LTR MaLR 240 577 -13 533 279 58 42 chr2 130839943 130840014 -119847840 + L1MC3 LINE L1 2781 2849 -3297 2241 90 4 0 chr2 130840014 130840293 -119847561 + AluSq SINE Alu 17 296 -17 533 279 58 42 chr2 130840293 130840642 -119847212 + L1MC3 LINE L1 2849 3213 -2933 2636 137 63 9 chr2 130840642 130841102 -119846752 + MER31A LTR ERV1 1 485 0 533 279 58 42 chr2 130841102 130841200 -119846654 + L1MC3 LINE L1 3213 3308 -2838 297 296 84 36 chr2 130841400 130841708 -119846146 + L1MC3 LINE L1 3702 4024 -2122 * 5540 194 40 48 chr2 130841687 130841828 -119846026 + L1MC3 LINE L1 5257 5398 -2387 2165 121 7 0 chr2 130841828 130842126 -119845728 + AluSq SINE Alu 1 300 -13 5540 194 40 48 chr2 130842126 130843416 -119844438 + L1MC3 LINE L1 5398 6677 -1108 770 219 118 5 chr2 130844759 130844946 -119842908 - MLT1D LTR MaLR -8 497 290 2322 109 0 6 chr2 130845589 130845901 -119841953 + AluSx SINE Alu 1 310 -2 307 203 43 80 chr2 130846388 130846526 -119841328 + L1MDa LINE L1 1237 1369 -5171 329 323 128 9 chr2 130846620 130846846 -119841008 + L1MDa LINE L1 1499 1751 -4789 312 272 28 50 chr2 130846883 130847063 -119840791 + L1ME LINE L1 51 226 -5844 998 276 32 45 chr2 130847380 130847916 -119839938 + L1ME LINE L1 540 1068 -5002 825 214 107 107 chr2 130848059 130848125 -119839729 + L1MC5 LINE L1 7323 7388 -573 2073 117 0 3 chr2 130848125 130848407 -119839447 + AluSg SINE Alu 5 285 -25 825 214 107 107 chr2 130848407 130848836 -119839018 + L1MC5 LINE L1 7387 7818 -143 2789 265 69 47 chr2 130848850 130849164 -119838690 - L1M4 LINE L1 -1176 5468 5162 2295 93 0 10 chr2 130849164 130849477 -119838377 - AluSx SINE Alu -2 310 1 2789 265 69 47 chr2 130849477 130850284 -119837570 - L1M4 LINE L1 -1482 5162 14 22 0 0 0 chr2 130851802 130851824 -119836030 + AT_rich Low_complexity Low_complexity 1 22 0 440 343 34 25 chr2 130852068 130852304 -119835550 + L1MB5 LINE L1 301 538 -6321 * 1980 241 64 51 chr2 130852300 130852886 -119834968 + L1MB5 LINE L1 1130 1707 -5252 2148 130 0 0 chr2 130852886 130853179 -119834675 + AluSg SINE Alu 15 307 -3 1980 241 64 51 chr2 130853179 130853856 -119833998 + L1MB5 LINE L1 1707 2401 -4558 2520 223 106 93 chr2 130853964 130854184 -119833670 + L1MB5 LINE L1 4225 4441 -2516 2812 10 0 0 chr2 130854184 130854482 -119833372 + AluYa5 SINE Alu 1 298 -13 2520 223 106 93 chr2 130854482 130855546 -119832308 + L1MB5 LINE L1 4441 5525 -1432 2407 48 6 42 chr2 130855612 130855943 -119831911 + L1PA7 LINE L1 5836 6154 0 257 290 43 51 chr2 130856423 130856561 -119831293 + L1ME2 LINE L1 545 681 -5703 1492 155 18 18 chr2 130856591 130856875 -119830979 + L1MB4 LINE L1 5896 6179 -1 471 307 0 12 chr2 130856882 130857045 -119830809 + L1ME2 LINE L1 4936 5096 -1286 2385 235 73 42 chr2 130857049 130857169 -119830685 + L1ME2 LINE L1 5245 5360 -1040 2326 159 41 22 chr2 130857169 130857585 -119830269 + MSTB LTR MaLR 1 424 -2 2385 235 73 42 chr2 130857585 130858574 -119829280 + L1ME2 LINE L1 5360 6390 -10 2067 184 30 78 chr2 130858958 130859497 -119828357 + L1MB5 LINE L1 6129 6641 -344 1455 203 47 41 chr2 130859497 130859837 -119828017 - MLT2D LTR ERVL 0 414 73 1523 172 77 0 chr2 130859888 130860173 -119827681 + L1MB5 LINE L1 6643 6949 -36 * 1973 153 13 65 chr2 130860169 130860555 -119827299 + L1MB3 LINE L1 5426 5791 -392 684 258 36 27 chr2 130860732 130860957 -119826897 - MIR SINE MIR 0 262 36 1681 190 68 5 chr2 130861063 130861432 -119826422 + L1MB3 LINE L1 5791 6182 -1 200 274 74 67 chr2 130861535 130861670 -119826184 + MIR SINE MIR 13 148 -114 212 259 19 0 chr2 130861747 130861801 -119826053 + (CACCAT)n Simple_repeat Simple_repeat 5 59 0 747 252 26 22 chr2 130862439 130862669 -119825185 + MIR SINE MIR 32 262 0 2134 110 4 0 chr2 130862884 130863188 -119824666 - AluSg SINE Alu 0 305 1 325 292 18 30 chr2 130863510 130863678 -119824176 - MER103 DNA DNA 0 166 1 282 95 0 0 chr2 130864540 130864582 -119823272 + (TGGA)n Simple_repeat Simple_repeat 1 42 0 222 285 109 18 chr2 130866041 130866211 -119821643 + MIR SINE MIR 64 250 -12 739 223 169 65 chr2 130866846 130867214 -119820640 + MLT1G3 LTR MaLR 78 510 -32 1024 259 119 57 chr2 130867493 130868073 -119819781 - MER21B LTR ERV1 -150 713 98 246 276 75 60 chr2 130868043 130868177 -119819677 - MER77 LTR ERV1 -404 201 66 * 2085 125 3 0 chr2 130868202 130868491 -119819363 + AluSc SINE Alu 14 303 -6 1985 121 7 3 chr2 130869153 130869435 -119818419 - AluSp SINE Alu -30 283 1 5818 65 4 4 chr2 130869815 130870550 -119817304 + L1PA7 LINE L1 5420 6154 0 202 284 90 0 chr2 130871156 130871223 -119816631 - MIR SINE MIR -98 164 92 522 0 0 0 chr2 130871269 130871327 -119816527 + (CA)n Simple_repeat Simple_repeat 1 58 0 886 249 132 47 chr2 130872001 130872492 -119815362 + MLT1F1 LTR MaLR 3 535 -32 1358 238 35 45 chr2 130873122 130873634 -119814220 + L1ME2 LINE L1 5645 6151 -13 832 246 95 29 chr2 130873827 130874197 -119813657 + MSTC LTR MaLR 1 428 0 4057 234 90 93 chr2 130874199 130875925 -119811929 + MSTD-int LTR MaLR 2 1722 -13 853 214 127 82 chr2 130875936 130876287 -119811567 + MSTD LTR MaLR 1 396 0 2065 127 0 3 chr2 130876451 130876734 -119811120 - AluSx SINE Alu -30 282 1 21 0 0 0 chr2 130879279 130879300 -119808554 + AT_rich Low_complexity Low_complexity 1 21 0 273 285 20 0 chr2 130879409 130879525 -119808329 - L1ME LINE L1 -358 5804 5682 740 173 96 41 chr2 130879558 130879755 -119808099 - MER3 DNA MER1_type 0 209 2 378 292 195 4 chr2 130879755 130879991 -119807863 - L1M4 LINE L1 -2932 3214 2934 198 317 30 20 chr2 130879996 130880097 -119807757 - L2 LINE L2 -4 3268 3167 784 180 3 48 chr2 130880278 130881308 -119806546 + BSR/Beta Satellite Satellite 1 984 0 366 277 153 15 chr2 130882906 130883278 -119804576 - MLT1L LTR MaLR -8 607 112 206 224 37 104 chr2 130883763 130883897 -119803957 + L2 LINE L2 1658 1782 -1532 2062 199 31 6 chr2 130884364 130884922 -119802932 + L1MC3 LINE L1 4862 5436 -743 871 189 97 14 chr2 130884922 130885177 -119802677 + L1MC3 LINE L1 6037 7785 0 501 254 77 18 chr2 130885887 130886056 -119801798 + MLT1J2 LTR MaLR 16 194 -256 2081 125 6 16 chr2 130886454 130886767 -119801087 - AluSx SINE Alu -2 310 1 405 246 65 89 chr2 130886809 130887315 -119800539 + L1MEc LINE L1 853 1326 -4889 1516 246 37 5 chr2 130887322 130887700 -119800154 - MLT1E2 LTR MaLR -7 619 230 1101 251 80 9 chr2 130887712 130888038 -119799816 - MLT1-int LTR MaLR -985 386 38 193 312 75 15 chr2 130888364 130888483 -119799371 + MIR SINE MIR 3 137 -71 1908 147 0 29 chr2 130888600 130888936 -119798918 + AluSg SINE Alu 1 310 0 274 250 0 15 chr2 130889432 130889500 -119798354 + LTR16C LTR ERVL 415 481 -10 202 296 11 34 chr2 130889972 130890060 -119797794 + MIR SINE MIR 157 242 -20 * 212 175 0 0 chr2 130890026 130890066 -119797788 + L2 LINE L2 3213 3252 -20 308 292 19 25 chr2 130892432 130892593 -119795261 + (CCCA)n Simple_repeat Simple_repeat 3 162 0 609 226 0 7 chr2 130892623 130893218 -119794636 + (CCCA)n Simple_repeat Simple_repeat 1 591 0 312 284 0 0 chr2 130893249 130893411 -119794443 + (CCCA)n Simple_repeat Simple_repeat 4 165 0 392 247 6 0 chr2 130893463 130893633 -119794221 + (CCCA)n Simple_repeat Simple_repeat 3 173 0 323 283 0 6 chr2 130893688 130894030 -119793824 + (CCCA)n Simple_repeat Simple_repeat 1 340 0 211 292 46 0 chr2 130894560 130894625 -119793229 + MIR3 SINE MIR 116 183 -25 214 185 19 56 chr2 130894681 130894735 -119793119 - MIR SINE MIR -113 149 98 268 378 120 23 chr2 130895551 130895810 -119792044 - L2 LINE L2 -2 3270 2987 204 361 49 35 chr2 130896330 130896474 -119791380 - L2 LINE L2 -900 2414 2269 237 310 37 27 chr2 130897422 130897609 -119790245 - L1ME LINE L1 -260 5861 5673 810 255 105 6 chr2 130897660 130897739 -119790115 + LTR37A LTR ERV1 39 109 -317 2360 81 3 3 chr2 130897739 130898034 -119789820 + AluY SINE Alu 2 296 -15 810 255 105 6 chr2 130898034 130898307 -119789547 + LTR37A LTR ERV1 109 426 0 416 309 42 34 chr2 130898307 130898572 -119789282 - L1ME LINE L1 -462 5659 5393 309 283 35 48 chr2 130898961 130899106 -119788748 - L1ME LINE L1 -2633 5409 5267 187 234 26 0 chr2 130899164 130899241 -119788613 + (TA)n Simple_repeat Simple_repeat 2 80 0 305 259 12 0 chr2 130900109 130900194 -119787660 + MLT1I LTR MaLR 81 166 -243 262 226 36 24 chr2 130900240 130900324 -119787530 + MLT1I LTR MaLR 315 399 -10 311 350 20 0 chr2 130901110 130901210 -119786644 + MIR SINE MIR 41 142 -66 489 272 69 60 chr2 130902189 130902421 -119785433 + MIR SINE MIR 21 254 -8 256 220 84 75 chr2 130903354 130903489 -119784365 + MIR SINE MIR 18 152 -67 23 33 0 0 chr2 130903786 130903816 -119784038 + AT_rich Low_complexity Low_complexity 1 30 0 13024 228 45 23 chr2 130903820 130906452 -119781402 + L1MA9 LINE L1 2 2575 -3801 1879 201 40 3 chr2 130906452 130906801 -119781053 + MLT1A1 LTR MaLR 2 363 -2 13024 228 45 23 chr2 130906801 130908512 -119779342 + L1MA9 LINE L1 2575 4247 -2129 2231 109 3 7 chr2 130908512 130908815 -119779039 + AluSx SINE Alu 1 302 -10 13024 228 45 23 chr2 130908815 130910881 -119776973 + L1MA9 LINE L1 4247 6343 -33 29 0 0 0 chr2 130910888 130910917 -119776937 + AT_rich Low_complexity Low_complexity 1 29 0 826 258 191 26 chr2 130911935 130912280 -119775574 + MLT2F LTR ERVL 245 646 -17 848 211 28 70 chr2 130913334 130913547 -119774307 + MER63A DNA MER1_type 2 205 -5 286 258 204 45 chr2 130914162 130914294 -119773560 + MIR SINE MIR 3 155 -107 1596 175 110 20 chr2 130915251 130915606 -119772248 + LTR16A1 LTR ERVL 60 446 -11 206 323 129 0 chr2 130915698 130915791 -119772063 - L2 LINE L2 0 3272 3168 181 217 14 14 chr2 130916311 130916380 -119771474 + GA-rich Low_complexity Low_complexity 2 70 0 239 176 15 103 chr2 130917336 130917377 -119770477 + L2 LINE L2 3204 3238 -34 1925 171 48 66 chr2 130917377 130917817 -119770037 - MSTB1 LTR MaLR 0 432 1 239 176 15 103 chr2 130917817 130917843 -119770011 + L2 LINE L2 3238 3265 -7 342 281 23 62 chr2 130917990 130918118 -119769736 + MIR SINE MIR 28 150 -112 314 340 48 0 chr2 130918224 130918371 -119769483 + L3 LINE CR1 1245 1398 -179 289 77 0 0 chr2 130918504 130918543 -119769311 - L1PA2 LINE L1 -7 6148 6110 276 11 11 0 chr2 130918532 130918572 -119769282 + L1PA4 LINE L1 5949 5991 -164 * 461 324 17 6 chr2 130919228 130919404 -119768450 - MIR SINE MIR -13 249 72 339 230 80 53 chr2 130920112 130920225 -119767629 - L1ME3A LINE L1 -286 5884 5769 538 262 19 6 chr2 130920226 130920393 -119767461 - L1ME3A LINE L1 -574 5596 5437 454 300 34 38 chr2 130920393 130920790 -119767064 - MLT1H1 LTR MaLR 0 555 115 273 304 18 18 chr2 130920823 130920935 -119766919 - MLT1H1 LTR MaLR -436 113 2 335 221 29 10 chr2 130920940 130921044 -119766810 - L1P4 LINE L1 -729 5437 5332 1230 265 60 51 chr2 130921054 130921232 -119766622 - L1ME3A LINE L1 -860 5286 5111 2126 116 3 0 chr2 130921232 130921525 -119766329 + AluSx SINE Alu 1 294 -18 1230 265 60 51 chr2 130921525 130922210 -119765644 - L1ME3A LINE L1 -1035 5111 4415 4029 229 56 29 chr2 130922229 130923075 -119764779 - L1MD2 LINE L1 -17 6411 5539 2303 91 0 7 chr2 130923075 130923373 -119764481 - AluY SINE Alu -15 296 1 4029 229 56 29 chr2 130923373 130923733 -119764121 - L1MD2 LINE L1 -889 5539 5190 241 216 164 12 chr2 130923729 130923900 -119763954 - L1MD2 LINE L1 -4080 2316 2120 * 6961 66 14 0 chr2 130923971 130925038 -119762816 - L1PA8A LINE L1 -14 6117 5047 3065 135 16 25 chr2 130925038 130925477 -119762377 + L1P LINE L1 2790 3224 -2922 185 0 40 0 chr2 130925477 130925502 -119762352 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 3065 135 16 25 chr2 130925502 130925617 -119762237 + L1P LINE L1 3224 3339 -2807 293 302 107 27 chr2 130925679 130925977 -119761877 - L1MD2 LINE L1 -4411 1985 1664 582 99 0 0 chr2 130926868 130926959 -119760895 + (TA)n Simple_repeat Simple_repeat 1 91 0 1381 100 0 147 chr2 130926959 130927074 -119760780 - AluSg/x SINE Alu -20 289 231 7823 38 14 3 chr2 130927074 130928192 -119759662 - L1PA4 LINE L1 -3 6152 5030 1381 100 0 147 chr2 130928192 130928335 -119759519 - AluSg/x SINE Alu -78 231 69 33 66 0 0 chr2 130928439 130928500 -119759354 + AT_rich Low_complexity Low_complexity 1 61 0 2085 269 90 10 chr2 130931013 130931723 -119756131 + L1ME3A LINE L1 5404 6170 0 * 3708 45 4 0 chr2 130931721 130932186 -119755668 + L1P LINE L1 2210 2676 -3470 3317 29 8 0 chr2 130932170 130932553 -119755301 + L1PA5 LINE L1 5736 6121 -33 * 396 0 0 0 chr2 130932553 130932597 -119755257 + (TA)n Simple_repeat Simple_repeat 1 44 0 200 200 0 0 chr2 130932626 130932661 -119755193 + (TG)n Simple_repeat Simple_repeat 1 35 0 266 297 0 27 chr2 130933209 130933283 -119754571 - L2 LINE L2 -1 3271 3200 458 251 189 31 chr2 130933468 130933759 -119754095 - MLT1J LTR MaLR -78 433 97 1444 280 57 56 chr2 130933805 130934451 -119753403 - MLT2F LTR ERVL 0 663 17 244 243 79 56 chr2 130934843 130934979 -119752875 - MLT1L LTR MaLR -3 611 363 587 269 96 15 chr2 130935015 130935275 -119752579 - LTR16A LTR ERVL 0 450 170 185 244 22 0 chr2 130936030 130936075 -119751779 - L2 LINE L2 0 3313 3268 189 0 0 0 chr2 130936898 130936919 -119750935 + (CA)n Simple_repeat Simple_repeat 1 21 0 345 290 9 0 chr2 130938010 130938117 -119749737 - LTR16A LTR ERVL 0 450 343 1082 287 71 6 chr2 130940453 130940805 -119747049 - L1ME2 LINE L1 -9 6155 5781 248 191 21 0 chr2 130940848 130940895 -119746959 - L1ME2 LINE L1 -376 5790 5743 4883 208 102 78 chr2 130941179 130941442 -119746412 + L1MD1 LINE L1 26 281 -6259 1963 105 0 11 chr2 130941442 130941708 -119746146 + AluSx SINE Alu 1 263 -49 4883 208 102 78 chr2 130941708 130943162 -119744692 + L1MD1 LINE L1 281 1784 -4756 2941 260 52 16 chr2 130943164 130944215 -119743639 + L1MD1 LINE L1 4106 5194 -1346 958 280 7 0 chr2 130944217 130944503 -119743351 - L1M4 LINE L1 -3245 2901 2614 4093 219 32 36 chr2 130944510 130945907 -119741947 + L1MD1 LINE L1 5243 6636 0 231 184 92 51 chr2 130945987 130946085 -119741769 - L1MA7 LINE L1 0 6291 6190 446 300 6 22 chr2 130946725 130946905 -119740949 + (TGG)n Simple_repeat Simple_repeat 3 179 0 213 178 0 0 chr2 130946964 130947009 -119740845 + (TGG)n Simple_repeat Simple_repeat 3 47 0 345 362 0 0 chr2 130947020 130947172 -119740682 + (TGG)n Simple_repeat Simple_repeat 2 153 0 287 265 0 22 chr2 130947265 130947638 -119740216 + (TGG)n Simple_repeat Simple_repeat 1 364 0 196 365 0 0 chr2 130948468 130948531 -119739323 - MIR SINE MIR -92 116 54 281 284 201 58 chr2 130948790 130949219 -119738635 + HAL1b LINE L1 801 1290 -58 546 257 29 23 chr2 130949708 130949879 -119737975 + L1MDa LINE L1 5 176 -6364 2687 188 85 50 chr2 130949892 130950667 -119737187 + L1MDa LINE L1 902 1703 -4837 1341 258 78 15 chr2 130950676 130951281 -119736573 + L1MDa LINE L1 2778 3420 -3120 2333 234 110 16 chr2 130952952 130953581 -119734273 - MER76 LTR ERV 0 688 1 2846 241 122 44 chr2 130953583 130954928 -119732926 + L1MDa LINE L1 3479 4928 -1612 1497 220 29 24 chr2 130954917 130954951 -119732903 + L1MDa LINE L1 5529 5561 -1075 * 2365 65 14 0 chr2 130954951 130955241 -119732613 + AluY SINE Alu 1 294 -17 1497 220 29 24 chr2 130955241 130955675 -119732179 + L1MDa LINE L1 5561 5998 -638 5691 146 87 26 chr2 130956347 130957481 -119730373 - MER52C LTR ERV1 -67 1211 8 325 203 16 0 chr2 130957833 130957897 -119729957 + L2 LINE L2 3247 3311 -2 366 289 63 67 chr2 130957929 130958182 -119729672 + HAL1 LINE L1 920 1171 -1336 301 293 20 10 chr2 130958304 130958403 -119729451 + (CA)n Simple_repeat Simple_repeat 1 100 0 594 208 107 19 chr2 130958629 130958788 -119729066 + MLT1C LTR MaLR 94 266 -201 1482 244 82 52 chr2 130959017 130959632 -119728222 + L1ME3 LINE L1 4926 5521 -641 1621 195 25 64 chr2 130959632 130960038 -119727816 - MLT1B LTR MaLR 0 390 1 1482 244 82 52 chr2 130960038 130960576 -119727278 + L1ME3 LINE L1 5521 6151 -11 233 241 0 0 chr2 130960915 130960969 -119726885 + (TA)n Simple_repeat Simple_repeat 1 54 0 226 150 0 0 chr2 130960974 130961014 -119726840 - LTR66 LTR ERVL -172 438 399 2524 211 11 13 chr2 130961015 130961490 -119726364 - MLT2B2 LTR ERVL -40 475 2 438 309 32 44 chr2 130962248 130962497 -119725357 + LTR33 LTR ERVL 3 248 -273 432 303 23 23 chr2 130962851 130962983 -119724871 + L2 LINE L2 3182 3313 0 1000 143 43 0 chr2 130963125 130963286 -119724568 + L1MD3 LINE L1 7103 7270 -725 540 205 9 9 chr2 130963291 130963403 -119724451 + MLT1F1 LTR MaLR 1 112 -455 538 244 77 18 chr2 130963427 130963595 -119724259 - MER20 DNA MER1_type -41 178 1 1501 175 74 30 chr2 130963645 130963942 -119723912 + AluJb SINE Alu 1 310 -2 1790 228 100 25 chr2 130963943 130964495 -119723359 + L1MD3 LINE L1 7388 7980 -15 21 71 0 0 chr2 130965699 130965741 -119722113 + AT_rich Low_complexity Low_complexity 1 42 0 271 338 68 8 chr2 130965782 130966048 -119721806 + L1ME LINE L1 5111 5392 -754 27 29 0 0 chr2 130966053 130966087 -119721767 + AT_rich Low_complexity Low_complexity 1 34 0 225 280 65 9 chr2 130966231 130966338 -119721516 + L1ME LINE L1 5540 5652 -469 4592 165 9 10 chr2 130966410 130967221 -119720633 + L1MA8 LINE L1 5301 6110 -181 242 250 0 0 chr2 130967221 130967273 -119720581 + LTR30 LTR ERV1 1 52 -670 890 121 78 168 chr2 130967273 130967529 -119720325 + LTR12 LTR ERV1 53 285 -429 230 292 0 0 chr2 130967530 130967602 -119720252 + LTR30 LTR ERV1 553 624 -98 608 150 31 71 chr2 130967602 130967729 -119720125 + LTR12 LTR ERV1 359 480 -234 753 216 40 0 chr2 130967730 130967906 -119719948 + L1MA8 LINE L1 6107 6289 -2 1315 251 96 33 chr2 130968777 130969021 -119718833 + Charlie1b DNA MER1_type 2 229 -2532 2258 80 17 7 chr2 130969021 130969320 -119718534 + AluSc SINE Alu 1 302 -7 1315 251 96 33 chr2 130969320 130969566 -119718288 + Charlie1b DNA MER1_type 229 523 0 31 58 0 0 chr2 130970033 130970085 -119717769 + AT_rich Low_complexity Low_complexity 1 52 0 2323 65 0 4 chr2 130970158 130970437 -119717417 - AluY SINE Alu -11 300 23 510 307 104 11 chr2 130970614 130970901 -119716953 - L1ME LINE L1 -422 5699 5386 260 292 130 0 chr2 130970945 130971106 -119716748 - L1ME4a LINE L1 -201 5920 5739 1645 185 134 53 chr2 130971130 130971388 -119716466 - MLT1C LTR MaLR 0 467 159 1986 89 63 0 chr2 130971388 130971658 -119716196 - AluSc SINE Alu -22 287 1 1645 185 134 53 chr2 130971658 130971831 -119716023 - MLT1C LTR MaLR -308 159 1 248 278 70 17 chr2 130972778 130972893 -119714961 - MIR SINE MIR -21 241 121 2426 264 39 39 chr2 130973291 130974777 -119713077 + L1MCb LINE L1 3 1487 -4851 303 175 0 0 chr2 130975156 130975213 -119712641 + (TG)n Simple_repeat Simple_repeat 2 58 0 2897 10 0 0 chr2 130975831 130976142 -119711712 + AluYa5 SINE Alu 1 311 0 288 205 24 60 chr2 130976325 130976408 -119711446 - MER76 LTR ERV -608 80 1 301 242 98 45 chr2 130977514 130977646 -119710208 + L1MB7 LINE L1 10 148 -6711 635 232 88 81 chr2 130978294 130978578 -119709276 + L1MB7 LINE L1 932 1217 -5642 1577 235 119 33 chr2 130978818 130979747 -119708107 + L1MB7 LINE L1 1205 2227 -4732 459 218 177 0 chr2 130979754 130979878 -119707976 + MLT1B LTR MaLR 28 173 -217 300 137 0 0 chr2 130979896 130979947 -119707907 + (TC)n Simple_repeat Simple_repeat 2 52 0 971 192 16 0 chr2 130979967 130980149 -119707705 + MLT1B LTR MaLR 206 390 0 518 268 98 13 chr2 130980149 130980373 -119707481 + L1MB7 LINE L1 2245 2487 -4472 2205 116 0 3 chr2 130980383 130980685 -119707169 + AluSg SINE Alu 1 301 -9 288 0 0 0 chr2 130980869 130980901 -119706953 + (TG)n Simple_repeat Simple_repeat 1 32 0 3815 241 127 42 chr2 130980953 130981408 -119706446 + L1MB7 LINE L1 2749 3164 -3981 2106 141 0 3 chr2 130981408 130981713 -119706141 + AluSp SINE Alu 1 304 -9 3815 241 127 42 chr2 130981713 130985210 -119702644 + L1MB7 LINE L1 3164 7145 0 202 333 0 9 chr2 130985696 130985804 -119702050 + T-rich Low_complexity Low_complexity 3 109 0 5059 201 66 23 chr2 130986894 130989044 -119698810 - L1MC2 LINE L1 -10 6334 4097 1056 154 0 0 chr2 130989057 130989219 -119698635 + AluSg/x SINE Alu 149 310 0 556 259 7 0 chr2 130989224 130989359 -119698495 - L1MC2 LINE L1 -2047 4099 3964 257 321 0 0 chr2 130989740 130989824 -119698030 - MER103 DNA DNA -42 124 41 254 325 88 0 chr2 130990715 130990829 -119697025 - L3 LINE CR1 -11 1566 1443 278 237 88 61 chr2 130991858 130991972 -119695882 - L2 LINE L2 -5 3308 3192 1435 183 113 0 chr2 130992353 130992708 -119695146 + L1PA16 LINE L1 5756 6150 -16 195 286 0 52 chr2 130993078 130993155 -119694699 + L2 LINE L2 2963 3035 -237 244 254 0 0 chr2 130993825 130993880 -119693974 - L2 LINE L2 -9 3263 3209 2100 129 0 0 chr2 130993956 130994265 -119693589 + AluSx SINE Alu 1 312 0 1388 234 66 9 chr2 130994734 130995067 -119692787 - MLT1A1 LTR MaLR -2 363 12 2617 73 28 20 chr2 130997321 130997834 -119690020 + L1PA7 LINE L1 4990 5505 -649 1846 73 0 0 chr2 130997934 130998203 -119689651 + L1PA7 LINE L1 5921 6189 0 2030 141 16 0 chr2 130999282 130999588 -119688266 - AluSq SINE Alu -2 311 1 814 287 29 32 chr2 131003687 131004001 -119683853 - L1MDa LINE L1 -6201 339 27 271 313 39 8 chr2 131005616 131005744 -119682110 - MIR SINE MIR -111 151 20 181 316 79 35 chr2 131005773 131005887 -119681967 - L2 LINE L2 -25 3247 3129 252 240 230 0 chr2 131006392 131006492 -119681362 + MIR SINE MIR 71 193 -69 329 264 8 78 chr2 131007866 131007995 -119679859 + L1MEc LINE L1 35 154 -6242 437 146 0 212 chr2 131008002 131008139 -119679715 - L1ME LINE L1 -543 5623 5516 1134 69 0 0 chr2 131008140 131008270 -119679584 + AluY SINE Alu 1 130 -181 843 134 8 15 chr2 131008296 131008430 -119679424 + AluY SINE Alu 125 257 -54 354 257 18 0 chr2 131008541 131008650 -119679204 - L1ME LINE L1 -847 5512 5402 683 167 14 7 chr2 131008661 131008799 -119679055 - L1ME LINE L1 -1051 5095 4957 307 267 0 0 chr2 131008797 131008887 -119678967 - L1ME LINE L1 -2365 3781 3692 * 297 89 0 0 chr2 131010751 131010796 -119677058 + (TG)n Simple_repeat Simple_repeat 1 45 0 490 259 96 5 chr2 131013710 131013907 -119673947 - MIR SINE MIR -30 232 18 713 204 12 35 chr2 131013935 131014107 -119673747 + Tigger3(Golem) DNA MER2_type 2870 3037 0 437 300 56 6 chr2 131014312 131014492 -119673362 + MIR SINE MIR 34 222 -40 259 339 8 16 chr2 131016178 131016299 -119671555 - L2 LINE L2 -229 3043 2924 189 241 0 0 chr2 131018201 131018255 -119669599 + (CA)n Simple_repeat Simple_repeat 1 54 0 2283 115 0 0 chr2 131018925 131019221 -119668633 + AluSg SINE Alu 1 296 -14 7582 240 71 33 chr2 131019316 131023181 -119664673 - L1MD2 LINE L1 0 6753 2610 2174 114 0 26 chr2 131023181 131023487 -119664367 - AluSx SINE Alu -13 299 2 7582 240 71 33 chr2 131023487 131025166 -119662688 - L1MD2 LINE L1 -4143 2610 996 393 276 84 52 chr2 131025565 131025851 -119662003 - L1MD2 LINE L1 -6196 344 50 201 309 103 18 chr2 131026467 131026632 -119661222 + L2 LINE L2 3083 3261 -52 3056 225 129 38 chr2 131026669 131027956 -119659898 + L1MCb LINE L1 813 1981 -4583 1392 192 34 27 chr2 131027956 131028248 -119659606 + AluJo SINE Alu 1 294 -18 1836 147 0 8 chr2 131028249 131028515 -119659339 + AluSx SINE Alu 2 265 -47 3056 225 129 38 chr2 131028515 131029723 -119658131 + L1MCb LINE L1 1981 3794 -2770 2527 71 0 0 chr2 131029723 131030020 -119657834 - AluY SINE Alu -14 297 1 3056 225 129 38 chr2 131030020 131030124 -119657730 + L1MCb LINE L1 3794 3887 -2677 2212 92 3 0 chr2 131030125 131030407 -119657447 - AluSx SINE Alu -8 304 22 1357 251 27 17 chr2 131030409 131030820 -119657034 + L1MCb LINE L1 4502 4916 -1648 430 276 42 5 chr2 131030796 131030981 -119656873 + L1MCb LINE L1 5364 5554 -1010 * 2097 133 43 55 chr2 131031004 131031441 -119656413 + L1MA6 LINE L1 5869 6300 0 391 244 93 27 chr2 131031609 131031834 -119656020 + L1MA6 LINE L1 6054 6293 -7 4996 207 67 45 chr2 131031992 131032113 -119655741 + L1MC3 LINE L1 6046 6163 -1622 1018 189 0 0 chr2 131032113 131032288 -119655566 + FAM SINE Alu 1 175 0 4996 207 67 45 chr2 131032288 131032727 -119655127 + L1MC3 LINE L1 6163 6591 -1194 6882 65 12 12 chr2 131032727 131034434 -119653420 + L1PA8 LINE L1 4463 6171 -1 4996 207 67 45 chr2 131034434 131035237 -119652617 + L1MC3 LINE L1 6591 7441 -344 370 297 83 22 chr2 131035420 131035772 -119652082 - L2 LINE L2 -5 3308 2878 19995 180 35 11 chr2 131036783 131039020 -119648834 + ERVL-B1 LTR ERVL 584 2937 -2827 1591 182 17 34 chr2 131039020 131039317 -119648537 + AluJo SINE Alu 1 292 -20 19995 180 35 11 chr2 131039317 131040677 -119647177 + ERVL-B1 LTR ERVL 2937 4264 -1500 5200 159 19 5 chr2 131040675 131041513 -119646341 + ERVL-B1 LTR ERVL 4496 5345 -419 * 1824 92 14 46 chr2 131041514 131041797 -119646057 + AluSc SINE Alu 1 274 -35 474 18 0 0 chr2 131041798 131041853 -119646001 + (TC)n Simple_repeat Simple_repeat 2 56 0 1872 174 67 3 chr2 131042022 131042111 -119645743 + ERVL-B1 LTR ERVL 5337 5419 -345 2345 99 0 0 chr2 131042111 131042413 -119645441 - AluSq SINE Alu -6 307 6 1872 174 67 3 chr2 131042413 131042709 -119645145 + ERVL-B1 LTR ERVL 5419 5747 -17 1454 251 111 0 chr2 131042714 131043101 -119644753 + MLT2B1 LTR ERVL 3 432 -88 5571 238 40 41 chr2 131043355 131044102 -119643752 - L1M4 LINE L1 -849 5366 4620 673 227 8 0 chr2 131044102 131044234 -119643620 + FLAM_C SINE Alu 1 133 0 5571 238 40 41 chr2 131044234 131045506 -119642348 - L1M4 LINE L1 -1595 4620 3411 2420 278 47 41 chr2 131045498 131046200 -119641654 - L1MEc LINE L1 -661 5572 4876 * 1234 186 93 96 chr2 131046200 131046566 -119641288 - MLT1A1 LTR MaLR 0 365 1 2420 278 47 41 chr2 131046566 131047551 -119640303 - L1MEc LINE L1 -1357 4876 3899 1635 217 23 50 chr2 131047551 131047947 -119639907 - MLT1B LTR MaLR -3 387 3 2420 278 47 41 chr2 131047947 131048333 -119639521 - L1MEc LINE L1 -2334 3899 1235 221 182 18 0 chr2 131048634 131048689 -119639165 + (TA)n Simple_repeat Simple_repeat 2 57 0 21 0 0 0 chr2 131048731 131048752 -119639102 + AT_rich Low_complexity Low_complexity 1 21 0 386 319 50 13 chr2 131048889 131049127 -119638727 - HAL1b LINE L1 -810 538 292 3500 27 12 2 chr2 131049302 131049703 -119638151 - L1PA3 LINE L1 0 6155 5751 213 119 0 0 chr2 131049704 131049746 -119638108 + (T)n Simple_repeat Simple_repeat 1 42 0 43855 30 21 3 chr2 131049748 131054074 -119633780 - L1HS LINE L1 0 6155 1682 2836 7 0 3 chr2 131054074 131054382 -119633472 + AluYa5 SINE Alu 1 307 -4 43855 30 21 3 chr2 131054382 131056095 -119631759 - L1HS LINE L1 -4473 1682 2 1543 209 68 3 chr2 131057031 131057385 -119630469 - L1MB7 LINE L1 -203 5981 5605 634 161 0 0 chr2 131057406 131057518 -119630336 - L1MB7 LINE L1 -706 5472 5361 409 253 60 0 chr2 131057528 131057678 -119630176 - L1M4c LINE L1 -4223 2423 2265 449 275 7 7 chr2 131057722 131057860 -119629994 - L1M4c LINE L1 -4541 2105 1968 4560 238 54 31 chr2 131057860 131059169 -119628685 - L1M4c LINE L1 -5200 1342 3 226 167 0 0 chr2 131059328 131059370 -119628484 - L1MEc LINE L1 -4812 1584 1543 2390 91 0 0 chr2 131059730 131060028 -119627826 + AluSc SINE Alu 6 303 -6 934 329 88 19 chr2 131060030 131060556 -119627298 + L1MCc LINE L1 49 610 -5813 301 305 40 62 chr2 131060729 131060906 -119626948 + HsTC2 DNA Tc2 534 706 -1192 866 324 70 33 chr2 131060988 131061414 -119626440 + L2 LINE L2 88 529 -2785 664 283 144 24 chr2 131061565 131062093 -119625761 + L2 LINE L2 2520 3134 -179 300 186 0 0 chr2 131062220 131062279 -119625575 + (TATATG)n Simple_repeat Simple_repeat 3 61 0 1857 230 34 5 chr2 131062282 131062725 -119625129 - L1MC3 LINE L1 -77 7708 7253 23 0 0 0 chr2 131062874 131062897 -119624957 + AT_rich Low_complexity Low_complexity 1 23 0 6018 37 6 0 chr2 131062897 131063573 -119624281 - L1PA5 LINE L1 -13 6141 5462 240 336 78 35 chr2 131063848 131063964 -119623890 + LTR67 LTR ERVL 83 203 -354 1962 118 3 17 chr2 131064424 131064741 -119623113 - AluSx SINE Alu 0 313 1 252 311 124 37 chr2 131064978 131065438 -119622416 - HAL1 LINE L1 -844 1663 1164 1790 124 77 4 chr2 131065744 131066017 -119621837 + AluSg SINE Alu 5 297 -13 569 200 0 0 chr2 131066032 131066132 -119621722 + U13 snRNA snRNA 5 104 0 198 0 0 0 chr2 131066530 131066552 -119621302 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 1773 113 13 0 chr2 131066555 131066793 -119621061 - AluSp SINE Alu -41 272 32 2232 117 3 0 chr2 131067692 131068000 -119619854 - AluSc SINE Alu 0 309 1 231 114 0 0 chr2 131068231 131068266 -119619588 + (T)n Simple_repeat Simple_repeat 1 35 0 26 0 0 0 chr2 131069598 131069624 -119618230 + AT_rich Low_complexity Low_complexity 1 26 0 1151 220 53 25 chr2 131073052 131073334 -119614520 + MER97b DNA MER1_type? 1 290 -763 4630 73 63 119 chr2 131073334 131073658 -119614196 - L1PA8 LINE L1 -4 6168 5827 2127 132 0 25 chr2 131073658 131073977 -119613877 - AluSx SINE Alu -1 311 1 4630 73 63 119 chr2 131073977 131074499 -119613355 - L1PA8 LINE L1 -345 5827 5370 2145 74 20 0 chr2 131074497 131074793 -119613061 + L1PA8 LINE L1 5060 5361 -785 * 1650 265 98 4 chr2 131074793 131075336 -119612518 + MER97a DNA MER1_type? 277 870 -24 230 337 129 0 chr2 131077192 131077293 -119610561 - L2 LINE L2 -25 3288 3175 242 263 0 0 chr2 131080136 131080193 -119607661 - L2 LINE L2 0 3313 3257 289 180 0 0 chr2 131080493 131080543 -119607311 - L2 LINE L2 -216 3056 3007 312 296 142 18 chr2 131080649 131080923 -119606931 + MLT1K LTR MaLR 195 502 -86 3453 150 5 74 chr2 131080925 131081573 -119606281 + LTR26 LTR ERV1 1 603 0 322 234 84 0 chr2 131084658 131084765 -119603089 + L1M4 LINE L1 3146 3261 -2885 1432 220 79 0 chr2 131084791 131085109 -119602745 + MER2 DNA MER2_type 2 344 0 22 56 0 0 chr2 131085109 131085145 -119602709 + AT_rich Low_complexity Low_complexity 1 36 0 1561 193 103 0 chr2 131085151 131085462 -119602392 - MLT1A1 LTR MaLR -12 353 11 2240 263 59 13 chr2 131085511 131085765 -119602089 + L1ME1 LINE L1 9 250 -6495 4186 60 2 2 chr2 131085765 131086264 -119601590 + L1PA5 LINE L1 5655 6153 -1 2240 263 59 13 chr2 131086264 131087415 -119600439 + L1ME1 LINE L1 250 1457 -5288 862 207 21 16 chr2 131087480 131087668 -119600186 + LTR52 LTR ERVL 4 192 -229 833 266 61 7 chr2 131087668 131087961 -119599893 + L1ME1 LINE L1 1662 1970 -4594 * 3700 241 44 31 chr2 131087937 131088204 -119599650 + L1ME1 LINE L1 3445 3707 -2857 2223 79 11 4 chr2 131088204 131088482 -119599372 + AluY SINE Alu 17 296 -15 3700 241 44 31 chr2 131088482 131089127 -119598727 + L1ME1 LINE L1 3707 4382 -2182 396 0 0 0 chr2 131089127 131089171 -119598683 + (CA)n Simple_repeat Simple_repeat 2 45 0 3700 241 44 31 chr2 131089171 131089596 -119598258 + L1ME1 LINE L1 4382 4800 -1764 5383 135 38 20 chr2 131089605 131090569 -119597285 + L1PA16 LINE L1 5184 6165 -1 2475 218 20 57 chr2 131090571 131091366 -119596488 + L1ME1 LINE L1 4840 5605 -959 4195 204 79 61 chr2 131091431 131092253 -119595601 + L1MD2 LINE L1 4426 5232 -1127 1953 127 0 3 chr2 131092253 131092544 -119595310 + L1PA10 LINE L1 5874 6163 -5 4195 204 79 61 chr2 131092544 131093612 -119594242 + L1MD2 LINE L1 5232 6344 -15 2139 109 0 43 chr2 131093615 131093919 -119593935 + AluSx SINE Alu 1 291 -21 877 290 11 31 chr2 131093927 131094282 -119593572 + L1ME1 LINE L1 6233 6580 -4 425 297 139 39 chr2 131094739 131095503 -119592351 + L1M4 LINE L1 3882 4721 -1425 1937 173 21 18 chr2 131097500 131097887 -119589967 - MLT1B LTR MaLR -2 388 1 2236 118 0 3 chr2 131101986 131102283 -119585571 + AluSx SINE Alu 3 298 -14 1105 211 106 35 chr2 131104258 131104599 -119583255 + MLT1A1 LTR MaLR 1 365 0 401 262 124 21 chr2 131105444 131105589 -119582265 + MER5B DNA MER1_type 11 170 -8 1414 246 25 44 chr2 131106699 131106742 -119581112 - MER110 LTR ERV1 -4 487 445 1886 172 20 0 chr2 131106742 131107038 -119580816 + AluJb SINE Alu 1 302 -10 1414 246 25 44 chr2 131107038 131107428 -119580426 - MER110 LTR ERV1 -46 445 62 192 329 12 12 chr2 131109207 131109292 -119578562 - MIR SINE MIR -84 178 94 365 173 19 4 chr2 131109798 131110008 -119577846 + AluJo SINE Alu 1 302 0 2184 130 0 3 chr2 131110086 131110379 -119577475 + AluSx SINE Alu 1 292 -20 5903 192 47 9 chr2 131110412 131112593 -119575261 - L1MB4 LINE L1 -55 6125 3868 3922 181 60 58 chr2 131112597 131113554 -119574300 - L1MC3 LINE L1 -1360 6425 5467 3776 252 30 17 chr2 131113568 131114755 -119573099 + L1 LINE L1 2667 3868 -2278 874 218 97 5 chr2 131114755 131114971 -119572883 - MER46A DNA MER2_type 0 236 1 3950 198 103 13 chr2 131114972 131115523 -119572331 + L1MC3 LINE L1 6424 7089 -696 210 118 0 0 chr2 131115523 131115557 -119572297 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 3950 198 103 13 chr2 131115557 131115910 -119571944 + L1MC3 LINE L1 7089 7409 -376 2189 119 3 0 chr2 131116034 131116327 -119571527 + AluSx SINE Alu 1 294 -18 1045 156 73 0 chr2 131116429 131116608 -119571246 + LTR47A LTR ERVL 261 452 0 1907 170 67 0 chr2 131116608 131116967 -119570887 + L1MC3 LINE L1 7396 7778 -7 387 246 67 18 chr2 131120709 131120949 -119566905 + MLT1G1 LTR MaLR 109 339 -203 627 224 99 10 chr2 131120968 131121160 -119566694 + L1MB8 LINE L1 5968 6176 -2 499 256 43 43 chr2 131122569 131122733 -119565121 + MER110 LTR ERV1 1 164 -327 387 239 86 8 chr2 131122822 131122939 -119564915 + MER110 LTR ERV1 346 471 -20 2166 119 0 0 chr2 131123501 131123828 -119564026 - AluSc SINE Alu 0 309 1 222 344 0 0 chr2 131123898 131123962 -119563892 + MIR SINE MIR 126 189 -73 1254 293 25 45 chr2 131124826 131125310 -119562544 - MER115 DNA AcHobo 0 693 220 4902 155 68 15 chr2 131125502 131126722 -119561132 + L1PB3 LINE L1 4872 6147 -7 197 333 77 8 chr2 131127851 131127968 -119559886 - MIR SINE MIR -118 144 20 3336 165 61 25 chr2 131128022 131128556 -119559298 - L1MA8 LINE L1 -4 6287 5774 297 0 0 0 chr2 131128556 131128589 -119559265 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1961 131 0 24 chr2 131128589 131128880 -119558974 - AluSx SINE Alu -28 284 1 3336 165 61 25 chr2 131128880 131129015 -119558839 - L1MA8 LINE L1 -516 5775 5593 214 302 0 0 chr2 131129238 131129291 -119558563 - L2 LINE L2 -5 3267 3215 318 255 108 38 chr2 131129914 131130071 -119557783 + MLT1J2 LTR MaLR 253 420 -30 2435 83 3 0 chr2 131130871 131131173 -119556681 - AluSq SINE Alu -10 303 1 4247 236 76 60 chr2 131131360 131133318 -119554536 + L1M4 LINE L1 16 2036 -4610 3897 146 22 12 chr2 131133397 131134074 -119553780 - L1MA9 LINE L1 -1 6311 5628 2113 183 16 37 chr2 131134076 131134562 -119553292 + L1 LINE L1 3723 4198 -1948 1131 264 30 25 chr2 131134648 131135208 -119552646 + L1M4 LINE L1 2298 2900 -3884 1882 236 36 30 chr2 131136022 131136628 -119551226 + L1M4 LINE L1 2927 3536 -3108 1304 216 45 36 chr2 131136624 131136958 -119550896 + L1MA9 LINE L1 5938 6274 -38 * 2066 240 76 71 chr2 131136940 131137287 -119550567 + L1M4 LINE L1 3508 3852 -2792 637 210 0 16 chr2 131137287 131137411 -119550443 + FLAM_A SINE Alu 1 122 -11 2066 240 76 71 chr2 131137411 131138303 -119549551 + L1M4 LINE L1 3852 4753 -1891 3996 35 22 0 chr2 131140114 131140603 -119547251 - L1PA4 LINE L1 0 6155 5656 2215 84 0 0 chr2 131140705 131140978 -119546876 - AluSg SINE Alu -12 298 26 302 268 57 41 chr2 131141361 131141484 -119546370 + MIR SINE MIR 22 146 -62 261 296 19 44 chr2 131141951 131142110 -119545744 - LTR33 LTR ERVL 0 521 367 291 267 95 0 chr2 131142186 131142291 -119545563 - LTR33 LTR ERVL -310 211 97 1781 232 84 31 chr2 131142317 131142873 -119544981 - MLT1E LTR MaLR 0 593 8 231 264 58 35 chr2 131142991 131143078 -119544776 - MIR3 SINE MIR -1 207 119 213 302 58 12 chr2 131144355 131144441 -119543413 - L2 LINE L2 -12 3301 3212 1943 168 92 26 chr2 131144441 131144836 -119543018 + MLT2C2 LTR ERVL 6 432 -32 492 18 0 0 chr2 131144836 131144893 -119542961 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 1943 168 92 26 chr2 131144893 131144921 -119542933 + MLT2C2 LTR ERVL 432 457 -7 2188 160 17 64 chr2 131144980 131145667 -119542187 - L1MA6 LINE L1 0 6300 5680 * 2693 175 20 11 chr2 131145664 131146611 -119541243 + L1M4 LINE L1 4736 5831 -813 7186 234 35 19 chr2 131146613 131147170 -119540684 + ERVL LTR ERVL 33 580 -5113 225 133 0 22 chr2 131147170 131147215 -119540639 + L1M1 LINE L1 5529 5572 -728 7186 234 35 19 chr2 131147215 131148865 -119538989 + ERVL LTR ERVL 580 2379 -3314 1173 103 6 0 chr2 131148891 131149066 -119538788 + L1PA14 LINE L1 5786 5961 -200 582 131 0 0 chr2 131149066 131149150 -119538704 + AluS SINE Alu 1 84 -228 2323 159 3 0 chr2 131149153 131149544 -119538310 + ERVL LTR ERVL 2432 2823 -2941 2466 181 59 1 chr2 131149593 131150169 -119537685 + ERVL LTR ERVL 4958 5597 -167 507 267 0 0 chr2 131150169 131150300 -119537554 + L1M4 LINE L1 3487 3617 -2529 2478 53 0 0 chr2 131150392 131150692 -119537162 + AluY SINE Alu 3 302 -9 201 419 8 0 chr2 131150713 131150830 -119537024 - L3 LINE CR1 -209 1368 1251 397 335 77 16 chr2 131150931 131151125 -119536729 + MIR SINE MIR 1 206 -56 233 365 48 28 chr2 131151280 131151425 -119536429 - L3 LINE CR1 -571 1006 859 2407 247 73 51 chr2 131151659 131152744 -119535110 - L1M4 LINE L1 -990 5156 4048 2584 224 60 16 chr2 131152756 131153897 -119533957 - L1MCa LINE L1 -4815 1749 359 579 239 119 32 chr2 131153903 131154168 -119533686 - L1MCa LINE L1 -5804 343 4 * 11798 166 44 56 chr2 131154159 131154454 -119533400 - L1PB1 LINE L1 -1 7074 6777 5593 138 15 0 chr2 131154454 131155605 -119532249 - L1PA15 LINE L1 -1 6164 4994 11798 166 44 56 chr2 131155605 131157894 -119529960 - L1PB1 LINE L1 -298 6777 4461 1731 175 27 3 chr2 131157894 131158225 -119529629 - THE1C LTR MaLR 0 375 37 11798 166 44 56 chr2 131158225 131160466 -119527388 - L1PB1 LINE L1 -2614 4461 2193 2264 103 3 16 chr2 131160466 131160777 -119527077 - AluSx SINE Alu -5 307 1 11798 166 44 56 chr2 131160777 131161662 -119526192 - L1PB1 LINE L1 -4882 2193 1151 1805 126 53 0 chr2 131161662 131161956 -119525898 - AluSx SINE Alu 0 313 6 11798 166 44 56 chr2 131161956 131162468 -119525386 - L1PB1 LINE L1 -5924 1151 634 963 210 0 0 chr2 131162468 131162668 -119525186 - L1PB1 LINE L1 -6663 200 1 5615 206 14 2 chr2 131162677 131163937 -119523917 - L1PA15 LINE L1 -1130 5016 3742 1535 193 13 30 chr2 131163949 131164342 -119523512 + L1P LINE L1 2788 3173 -2973 16204 165 24 17 chr2 131164349 131167428 -119520426 + L1MA3 LINE L1 18 3117 -4448 5297 134 16 32 chr2 131167439 131168470 -119519384 + L1MA3 LINE L1 6711 7724 0 2275 211 12 19 chr2 131168473 131169046 -119518808 + L1M1 LINE L1 4600 5168 -2397 * 3140 231 38 11 chr2 131169041 131170079 -119517775 - L1MD2 LINE L1 -233 6126 5058 1370 233 79 18 chr2 131170129 131170459 -119517395 + MLT2B1 LTR ERVL 12 361 -159 190 213 12 38 chr2 131170471 131170551 -119517303 + (TA)n Simple_repeat Simple_repeat 1 78 0 227 256 6 131 chr2 131170601 131170777 -119517077 - L1MD2 LINE L1 -1145 5001 4848 1105 118 128 15 chr2 131170827 131171030 -119516824 + L1P LINE L1 1 226 -5920 1126 247 43 27 chr2 131221279 131221377 -119466477 - L1MD2 LINE L1 -3450 2696 2601 2062 115 0 23 chr2 131221377 131221682 -119466172 + AluY SINE Alu 1 298 -13 2304 72 0 0 chr2 131221684 131221982 -119465872 + AluSq SINE Alu 21 318 0 1126 247 43 27 chr2 131221982 131222389 -119465465 - L1MD2 LINE L1 -3545 2601 2178 1743 266 75 31 chr2 131222441 131223655 -119464199 - L1ME3A LINE L1 -63 6176 4903 507 339 96 18 chr2 131223681 131224067 -119463787 - L1ME3A LINE L1 -4109 2287 1872 225 284 46 57 chr2 131224090 131224284 -119463570 - L1ME3A LINE L1 -4586 1810 1619 2135 69 0 82 chr2 131224366 131224700 -119463154 + AluY SINE Alu 1 309 0 21 0 0 0 chr2 131224700 131224721 -119463133 + AT_rich Low_complexity Low_complexity 1 21 0 251 274 38 9 chr2 131225645 131225751 -119462103 - L1ME3A LINE L1 -5925 280 172 225 291 91 53 chr2 131226663 131226928 -119460926 + L1MEd LINE L1 67 341 -5778 354 237 0 0 chr2 131226948 131227024 -119460830 - MIR SINE MIR -15 247 172 798 287 49 26 chr2 131227159 131227466 -119460388 - MLT1J1 LTR MaLR -132 314 1 315 274 141 22 chr2 131227468 131227603 -119460251 - MIR SINE MIR -92 170 20 256 298 89 42 chr2 131228767 131228935 -119458919 + MLT1H1 LTR MaLR 69 244 -346 29109 97 13 11 chr2 131228935 131234607 -119453247 + L1PA7 LINE L1 752 6461 -8 270 264 118 22 chr2 131234686 131234864 -119452990 + MLT1H1 LTR MaLR 242 436 -119 2344 272 84 76 chr2 131235759 131237839 -119450015 - L1MC5 LINE L1 -164 7797 5705 1764 165 32 0 chr2 131237839 131238124 -119449730 - AluJb SINE Alu -6 306 13 2344 272 84 76 chr2 131238124 131239094 -119448760 - L1MC5 LINE L1 -2256 5705 4745 342 283 66 42 chr2 131239217 131239429 -119448425 - L1MC5 LINE L1 -1599 4547 4331 309 68 0 0 chr2 131239431 131239475 -119448379 + (TA)n Simple_repeat Simple_repeat 2 45 0 364 267 30 0 chr2 131239523 131239658 -119448196 + (TA)n Simple_repeat Simple_repeat 1 139 0 1570 170 14 51 chr2 131239675 131239733 -119448121 - L1PB4 LINE L1 -6 6150 6091 2647 147 62 2 chr2 131239733 131240135 -119447719 - MSTB LTR MaLR 0 426 1 9165 180 35 5 chr2 131240135 131241738 -119446116 - MSTB-int LTR MaLR 0 1651 1 2521 149 42 38 chr2 131241738 131241949 -119445905 - MSTB LTR MaLR 0 426 218 2320 101 0 0 chr2 131241949 131242236 -119445618 + AluSx SINE Alu 1 287 -25 216 0 0 0 chr2 131242244 131242268 -119445586 + (GA)n Simple_repeat Simple_repeat 2 25 0 2521 149 42 38 chr2 131242268 131242471 -119445383 - MSTB LTR MaLR -214 212 1 1570 170 14 51 chr2 131242471 131242704 -119445150 - L1PB4 LINE L1 -62 6094 5868 670 296 91 45 chr2 131242758 131243574 -119444280 - L1MC5 LINE L1 -1904 4242 3386 6130 232 22 12 chr2 131243592 131245184 -119442670 + L1MC1 LINE L1 3443 5050 -1096 1520 167 16 0 chr2 131245209 131245582 -119442272 + L1MC1 LINE L1 5148 5525 -743 1453 184 8 0 chr2 131245587 131245848 -119442006 + L1MC1 LINE L1 5876 6138 -195 1190 178 0 5 chr2 131246458 131246660 -119441194 - AluJo SINE Alu -26 286 86 8794 232 66 44 chr2 131247903 131249759 -119438095 + L1MD2 LINE L1 1562 3375 -3378 3340 149 64 7 chr2 131249759 131250335 -119437519 + LTR38B LTR ERV1 2 610 0 8794 232 66 44 chr2 131250335 131252988 -119434866 + L1MD2 LINE L1 3375 5967 -786 2012 129 7 0 chr2 131252988 131253275 -119434579 + AluSg SINE Alu 1 289 -21 8794 232 66 44 chr2 131253275 131253469 -119434385 + L1MD2 LINE L1 5967 6155 -598 2034 150 0 0 chr2 131253469 131253755 -119434099 + AluSx SINE Alu 5 290 -22 8794 232 66 44 chr2 131253755 131254081 -119433773 + L1MD2 LINE L1 6155 6691 -62 1683 190 3 7 chr2 131254081 131254413 -119433441 - AluJo SINE Alu 0 312 1 8794 232 66 44 chr2 131254413 131254473 -119433381 + L1MD2 LINE L1 6691 6748 -5 4469 168 42 49 chr2 131254426 131255407 -119432447 - L1MB4 LINE L1 0 6180 5202 * 2988 233 51 13 chr2 131255408 131256246 -119431608 - L1MB4 LINE L1 -1053 5093 4224 1637 237 85 11 chr2 131256243 131256712 -119431142 + L1M4 LINE L1 3664 4167 -1979 * 336 130 0 14 chr2 131256741 131256810 -119431044 + L1MD2 LINE L1 6291 6358 -1 2164 110 7 19 chr2 131256878 131257186 -119430668 + AluSg SINE Alu 1 304 -6 2107 74 3 61 chr2 131257195 131257491 -119430363 + AluSx SINE Alu 17 295 -17 348 141 28 42 chr2 131257837 131257908 -119429946 + AluSp SINE Alu 121 190 -113 640 292 94 44 chr2 131257975 131258430 -119429424 + Charlie7 DNA MER1_type 209 686 -1926 21 0 0 0 chr2 131258445 131258466 -119429388 + AT_rich Low_complexity Low_complexity 1 21 0 2288 98 13 19 chr2 131258967 131259283 -119428571 - L1PA8 LINE L1 -6 6166 5853 14398 155 14 108 chr2 131259283 131262741 -119425113 - L1P LINE L1 -3012 3134 2 4209 202 54 1 chr2 131262751 131263628 -119424226 - L1MC3 LINE L1 0 7785 6863 653 139 25 41 chr2 131264470 131264593 -119423261 + L1M3 LINE L1 5551 5671 -500 451 169 0 0 chr2 131265273 131265350 -119422504 + MIR SINE MIR 186 262 0 251 317 22 27 chr2 131265486 131265613 -119422241 + MIR SINE MIR 24 141 -67 269 286 94 78 chr2 131266018 131266263 -119421591 + L2 LINE L2 2945 3193 -79 5550 151 22 12 chr2 131267183 131268216 -119419638 + L1PA16 LINE L1 5129 6166 0 834 264 120 92 chr2 131268895 131269485 -119418369 - MLT1L LTR MaLR -8 607 1 533 170 143 0 chr2 131271666 131271778 -119416076 - L2 LINE L2 -6 3307 3180 526 208 16 0 chr2 131271812 131271937 -119415917 + L1MB7 LINE L1 5080 5206 -940 1450 185 3 52 chr2 131271940 131272248 -119415606 + L1MA3 LINE L1 6013 6305 0 4369 193 31 5 chr2 131272495 131273413 -119414441 + L1MB7 LINE L1 5188 6125 -59 571 190 121 46 chr2 131273463 131273637 -119414217 + MER53 DNA DNA 2 188 -1 1654 83 65 0 chr2 131273869 131274085 -119413769 - MER30 DNA MER1_type 0 230 1 5182 154 39 6 chr2 131274881 131275783 -119412071 + L1MA6 LINE L1 5352 6283 -17 2211 123 181 10 chr2 131275796 131276211 -119411643 + LTR19A LTR ERV1 1 486 0 494 205 45 27 chr2 131277118 131277230 -119410624 - MER81 DNA DNA 0 114 1 1391 138 56 4 chr2 131277410 131277641 -119410213 + L1MB3 LINE L1 5941 6183 0 256 314 10 10 chr2 131277659 131277761 -119410093 + Charlie8 DNA MER1_type 378 479 -1938 219 103 0 0 chr2 131279106 131279145 -119408709 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 217 327 119 0 chr2 131279991 131280092 -119407762 + MIR SINE MIR 122 234 -28 227 377 28 0 chr2 131281094 131281200 -119406654 - MIR SINE MIR -78 130 22 2519 149 64 46 chr2 131281278 131282018 -119405836 + L1MA9 LINE L1 5476 6303 -9 1714 169 16 3 chr2 131282089 131282397 -119405457 + AluJo SINE Alu 1 312 0 186 264 83 14 chr2 131282667 131282739 -119405115 - L2 LINE L2 -338 2976 2900 1987 177 48 3 chr2 131282924 131283257 -119404597 + MER7A DNA MER2_type 1 346 0 395 304 29 0 chr2 131283642 131283744 -119404110 + MER81 DNA DNA 1 105 -9 403 227 23 0 chr2 131284097 131284185 -119403669 - MER81 DNA DNA 0 114 25 1556 98 0 40 chr2 131284607 131284853 -119403001 - AluSg/x SINE Alu 0 312 85 2136 122 0 0 chr2 131284853 131285141 -119402713 - AluSx SINE Alu -24 288 1 526 321 106 28 chr2 131285211 131285635 -119402219 - L2 LINE L2 -2 3311 2855 1012 306 144 19 chr2 131285889 131286460 -119401394 - L2 LINE L2 -653 2661 2020 260 322 43 0 chr2 131286707 131286822 -119401032 + LTR16A LTR ERVL 323 442 -8 690 336 93 8 chr2 131286831 131287304 -119400550 - L2 LINE L2 -2208 1106 594 2165 133 0 0 chr2 131287671 131287971 -119399883 - AluSx SINE Alu -12 300 1 2128 155 101 3 chr2 131288137 131288525 -119399329 + MSTB LTR MaLR 1 426 0 6012 231 61 14 chr2 131288548 131291820 -119396034 - L1MC3 LINE L1 -17 8162 4710 1599 179 102 12 chr2 131291836 131292171 -119395683 - L1MB7 LINE L1 -145 6039 5675 659 188 31 0 chr2 131292309 131292437 -119395417 - L1MD1 LINE L1 -22 6220 6089 560 236 160 28 chr2 131292482 131292632 -119395222 + L1MD2 LINE L1 5979 6166 -193 234 62 0 0 chr2 131292632 131292664 -119395190 + (CA)n Simple_repeat Simple_repeat 1 32 0 560 236 160 28 chr2 131292664 131292725 -119395129 + L1MD2 LINE L1 6166 6218 -141 * 3381 255 46 15 chr2 131292722 131293859 -119393995 - L1MC3 LINE L1 -2827 3713 2571 1820 171 0 3 chr2 131293859 131294151 -119393703 + AluJb SINE Alu 1 291 -21 3381 255 46 15 chr2 131294151 131294354 -119393500 - L1MC3 LINE L1 -3969 2571 2376 395 223 60 144 chr2 131294362 131294577 -119393277 - MLT1I LTR MaLR -72 337 141 1641 192 22 35 chr2 131295715 131295929 -119391925 - MLT1A1 LTR MaLR 0 365 157 2304 82 13 0 chr2 131295929 131296234 -119391620 - AluSc SINE Alu 0 309 1 1641 192 22 35 chr2 131296234 131296389 -119391465 - MLT1A1 LTR MaLR -208 157 1 493 86 0 0 chr2 131297278 131297348 -119390506 + LOR1b LTR ERV1 225 294 -167 670 123 10 210 chr2 131297348 131297543 -119390311 - AluJo/FRAM SINE Alu -10 292 137 1425 121 139 0 chr2 131297546 131297769 -119390085 - AluSg1 SINE Alu -14 295 42 1144 99 0 0 chr2 131297768 131297909 -119389945 - AluSq/x SINE Alu -170 142 2 * 2105 250 98 101 chr2 131297918 131299380 -119388474 - L1MC3 LINE L1 -5071 1469 12 395 19 19 0 chr2 131299953 131300005 -119387849 + (TG)n Simple_repeat Simple_repeat 1 53 0 247 324 0 0 chr2 131300579 131300650 -119387204 - MIR SINE MIR -116 146 76 589 287 22 17 chr2 131301043 131301224 -119386630 - MLT1H1 LTR MaLR -37 518 337 269 299 0 0 chr2 131301387 131301454 -119386400 + MER63 DNA MER1_type 995 1061 0 636 283 22 11 chr2 131301455 131301639 -119386215 - MLT1H1 LTR MaLR -361 194 9 210 276 0 0 chr2 131301643 131301701 -119386153 + (TG)n Simple_repeat Simple_repeat 1 58 0 306 273 48 49 chr2 131302026 131302248 -119385606 + MLT1L LTR MaLR 108 393 -222 2104 134 0 0 chr2 131303648 131303939 -119383915 - AluSc SINE Alu -18 291 1 317 149 15 0 chr2 131304167 131304234 -119383620 + (TAGTG)n Simple_repeat Simple_repeat 3 70 0 261 227 121 0 chr2 131306936 131307002 -119380852 + LTR67 LTR ERVL 91 164 -393 220 333 60 8 chr2 131307350 131307467 -119380387 + L2 LINE L2 3147 3269 -3 373 350 96 5 chr2 131408269 131408466 -119279388 - MIR SINE MIR -14 248 34 862 217 96 29 chr2 131408492 131408696 -119279158 + L1MEc LINE L1 608 838 -5558 2123 149 0 0 chr2 131408696 131408992 -119278862 + AluSx SINE Alu 1 296 -16 862 217 96 29 chr2 131408992 131409068 -119278786 + L1MEc LINE L1 838 907 -5489 227 292 42 21 chr2 131409069 131409165 -119278689 + L2 LINE L2 2986 3083 -230 375 111 133 0 chr2 131409165 131409300 -119278554 - L1MA7 LINE L1 -1 6290 6138 2004 125 52 0 chr2 131409828 131410117 -119277737 + AluY SINE Alu 1 304 -7 210 37 0 0 chr2 131410198 131410225 -119277629 + (TC)n Simple_repeat Simple_repeat 1 27 0 237 292 28 0 chr2 131410714 131410786 -119277068 - L1MEc LINE L1 -5959 437 364 512 283 17 22 chr2 131410898 131411078 -119276776 - L1MEc LINE L1 -6180 216 38 639 217 55 24 chr2 131411974 131412227 -119275627 + L1M4 LINE L1 4415 4675 -1471 237 267 66 50 chr2 131413881 131414017 -119273837 - MIR SINE MIR -61 147 38 3707 163 19 20 chr2 131415581 131415730 -119272124 - L1 LINE L1 -901 5245 5097 2271 104 0 3 chr2 131415730 131416018 -119271836 + AluSg1 SINE Alu 1 287 -22 3707 163 19 20 chr2 131416018 131416598 -119271256 - L1 LINE L1 -1049 5097 4517 2105 131 13 0 chr2 131416651 131416949 -119270905 - AluSq SINE Alu -11 302 1 2737 121 7 16 chr2 131418553 131418993 -119268861 + L1PA13 LINE L1 5725 6160 -3 946 169 28 28 chr2 131418993 131419206 -119268648 - LTR37B LTR ERV1 -31 437 225 26 0 0 0 chr2 131419660 131419686 -119268168 + AT_rich Low_complexity Low_complexity 1 26 0 229 289 51 57 chr2 131419980 131420179 -119267675 - MIR SINE MIR -19 189 1 229 313 96 70 chr2 131420308 131420682 -119267172 - L2 LINE L2 -1274 2040 1657 245 237 0 0 chr2 131420899 131420958 -119266896 - MER63 DNA MER1_type -35 1026 968 708 133 7 77 chr2 131420984 131421127 -119266727 + FLAM_C SINE Alu 11 143 0 198 0 0 0 chr2 131421185 131421207 -119266647 + (T)n Simple_repeat Simple_repeat 1 22 0 357 300 129 67 chr2 131421606 131422186 -119265668 + L1MEd LINE L1 47 662 -5457 934 270 70 14 chr2 131422186 131422531 -119265323 + MLT1E3 LTR MaLR 1 364 -260 1820 175 42 6 chr2 131422938 131423270 -119264584 + MER2 DNA MER2_type 1 344 0 2220 116 10 0 chr2 131423384 131423686 -119264168 + AluSq SINE Alu 1 305 -8 1595 215 49 29 chr2 131425913 131426472 -119261382 - L1M4 LINE L1 -3903 3662 3089 492 212 106 20 chr2 131428798 131428949 -119258905 - MLT1E2 LTR MaLR -111 515 352 273 206 219 19 chr2 131428988 131429148 -119258706 + LTR33 LTR ERVL 37 228 -293 2196 114 11 26 chr2 131429362 131429712 -119258142 - LTR39 LTR ERV1 -336 447 103 652 152 0 10 chr2 131429712 131429811 -119258043 - AluS SINE Alu -214 99 2 2400 102 0 10 chr2 131429826 131430140 -119257714 - AluSx SINE Alu -1 311 1 203 200 0 15 chr2 131430255 131430320 -119257534 + (CA)n Simple_repeat Simple_repeat 1 64 0 795 212 15 73 chr2 131430612 131430684 -119257170 + Charlie4a DNA MER1_type 248 323 -1638 1929 158 0 7 chr2 131430684 131430981 -119256873 - AluJb SINE Alu -17 295 1 795 212 15 73 chr2 131430981 131430997 -119256857 + Charlie4a DNA MER1_type 323 338 -1623 1908 145 14 14 chr2 131430997 131431294 -119256560 - AluSx SINE Alu -15 297 1 795 212 15 73 chr2 131431294 131431320 -119256534 + Charlie4a DNA MER1_type 338 364 -1597 2011 136 20 0 chr2 131431320 131431621 -119256233 - AluSx SINE Alu -5 307 1 795 212 15 73 chr2 131431621 131431778 -119256076 + Charlie4a DNA MER1_type 364 505 -3 180 0 0 0 chr2 131432703 131432723 -119255131 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 590 215 17 0 chr2 131433001 131433156 -119254698 - L1MC/D LINE L1 -730 5436 5314 325 308 111 0 chr2 131433172 131433289 -119254565 - L1MC/D LINE L1 -1235 4911 4782 * 352 238 21 91 chr2 131433275 131433354 -119254500 - L1MC/D LINE L1 -3145 3001 2935 5277 68 14 6 chr2 131433354 131434013 -119253841 - SVA Other Other 0 1386 723 352 238 21 91 chr2 131434013 131434076 -119253778 - L1MC/D LINE L1 -3211 2935 2869 1234 204 8 8 chr2 131434177 131434437 -119253417 + Tigger7 DNA MER2_type 95 354 -196 1006 179 25 0 chr2 131434470 131434671 -119253183 + Tigger7 DNA MER2_type 2280 2485 -2 1175 153 0 27 chr2 131434673 131434821 -119253033 - L1MB7 LINE L1 -261 5923 5781 2094 126 10 3 chr2 131434821 131435114 -119252740 - AluSg SINE Alu -15 295 1 1175 153 0 27 chr2 131435114 131435187 -119252667 - L1MB7 LINE L1 -403 5781 5708 * 1296 270 7 9 chr2 131435181 131435614 -119252240 - L1MC/D LINE L1 -3426 2720 2289 1260 271 77 22 chr2 131435611 131436391 -119251463 - L1M1 LINE L1 -3981 3584 2796 * 1880 124 7 7 chr2 131436499 131436772 -119251082 + AluSx SINE Alu 27 299 -13 755 189 33 147 chr2 131437559 131437866 -119249988 - L1MD2 LINE L1 -5 6354 6083 1197 185 77 22 chr2 131437867 131438228 -119249626 - L1MB7 LINE L1 -743 5403 5221 317 314 39 20 chr2 131439070 131439223 -119248631 + MER106B DNA MER1_type 896 1051 -8 291 272 82 48 chr2 131440331 131440478 -119247376 + L2 LINE L2 2933 3084 -188 414 320 71 27 chr2 131440498 131440835 -119247019 + L2 LINE L2 2284 2635 -679 9313 51 5 2 chr2 131440944 131442607 -119245247 - L1P2 LINE L1 -337 5817 4151 1659 52 61 5 chr2 131442707 131442920 -119244934 - AluY SINE Alu -45 266 42 183 80 0 0 chr2 131443327 131443352 -119244502 + (TTC)n Simple_repeat Simple_repeat 3 27 0 2203 119 3 3 chr2 131443451 131443753 -119244101 - AluSq SINE Alu -11 302 1 216 0 0 0 chr2 131443753 131443777 -119244077 + (T)n Simple_repeat Simple_repeat 1 24 0 223 255 104 57 chr2 131443883 131443989 -119243865 + MIR SINE MIR 83 193 -69 874 176 56 84 chr2 131445452 131445505 -119242349 - L1MB5 LINE L1 -10 6164 6111 2099 133 9 25 chr2 131445505 131445821 -119242033 + AluJb SINE Alu 1 311 -1 874 176 56 84 chr2 131445821 131446017 -119241837 - L1MB5 LINE L1 -63 6111 5922 270 185 19 0 chr2 131446019 131446073 -119241781 + Tigger7 DNA MER2_type 3 57 -282 1259 125 0 19 chr2 131446336 131446552 -119241302 + MER4D LTR ERV1 1 212 -691 2201 127 0 3 chr2 131446555 131446854 -119241000 - AluSx SINE Alu -14 298 1 2486 135 19 12 chr2 131446857 131447287 -119240567 + MER4E LTR ERV1 347 779 0 635 242 15 76 chr2 131448196 131448303 -119239551 - MIR SINE MIR -2 260 169 1940 101 11 8 chr2 131448303 131448570 -119239284 - AluSq SINE Alu -45 268 1 635 242 15 76 chr2 131448570 131448660 -119239194 - MIR SINE MIR -93 169 75 196 242 234 55 chr2 131449060 131449188 -119238666 + MIR SINE MIR 101 251 -11 2387 164 22 0 chr2 131449521 131449929 -119237925 - MLT-int LTR MaLR -1 1734 1318 2513 219 21 10 chr2 131450157 131450776 -119237078 - MLT1-int LTR MaLR -484 887 30 432 237 77 41 chr2 131450778 131450947 -119236907 + LTR39 LTR ERV1 3 177 -606 1654 157 31 50 chr2 131451058 131451376 -119236478 + AluJo SINE Alu 1 312 0 1840 109 0 0 chr2 131451416 131451654 -119236200 + AluSx SINE Alu 1 238 -74 450 296 134 28 chr2 131451870 131452086 -119235768 - MIR SINE MIR -13 249 11 198 306 27 36 chr2 131452348 131452459 -119235395 - MIR SINE MIR -130 132 23 1675 174 42 3 chr2 131452922 131453209 -119234645 + AluJo SINE Alu 1 298 -14 276 323 0 0 chr2 131453580 131453713 -119234141 + C-rich Low_complexity Low_complexity 1 133 0 267 54 0 0 chr2 131453716 131453753 -119234101 + (C)n Simple_repeat Simple_repeat 1 37 0 806 110 8 8 chr2 131453952 131454070 -119233784 + FLAM_C SINE Alu 1 118 -15 21 71 0 0 chr2 131454070 131454112 -119233742 + AT_rich Low_complexity Low_complexity 1 42 0 368 305 66 20 chr2 131454389 131454887 -119232967 + L1MC4a LINE L1 4918 5513 -608 408 249 143 55 chr2 131455065 131455323 -119232531 + L1MC4a LINE L1 5576 5861 -1947 2188 122 3 0 chr2 131455323 131455619 -119232235 - AluSx SINE Alu -15 297 1 408 249 143 55 chr2 131455619 131455633 -119232221 + L1MC4a LINE L1 5861 5872 -1936 5160 146 41 25 chr2 131455832 131457537 -119230317 + L1MA4 LINE L1 4571 6299 -1 930 197 64 9 chr2 131457544 131457762 -119230092 - MLT2B1 LTR ERVL -285 235 6 183 161 32 161 chr2 131458118 131458180 -119229674 + L2 LINE L2 3258 3311 -2 2639 276 40 51 chr2 131458855 131459882 -119227972 + L1M4b LINE L1 24 1039 -5820 462 169 0 0 chr2 131459890 131459973 -119227881 + L1ME LINE L1 5361 5443 -727 9334 75 54 8 chr2 131460078 131461375 -119226479 + SVA Other Other 31 1386 0 1244 90 51 0 chr2 131461499 131461677 -119226177 + AluY SINE Alu 119 305 -6 4382 189 18 3 chr2 131461677 131462611 -119225243 + L1 LINE L1 4384 5331 -815 358 276 41 29 chr2 131463052 131463222 -119224632 - MLT1J1 LTR MaLR -28 418 247 294 279 93 0 chr2 131463562 131463691 -119224163 + L1ME4a LINE L1 5978 6118 -3 3221 128 42 18 chr2 131465531 131466077 -119221777 - LTR39 LTR ERV1 -224 559 1 2275 116 6 25 chr2 131466625 131466943 -119220911 - AluSq SINE Alu -1 312 1 654 209 23 8 chr2 131467502 131467631 -119220223 - AluSg/x SINE Alu -9 303 173 305 179 64 0 chr2 131467771 131467849 -119220005 - L1 LINE L1 -1114 5032 4950 1557 118 5 0 chr2 131467853 131468064 -119219790 - AluSp SINE Alu -6 307 96 1565 226 62 5 chr2 131468067 131468456 -119219398 - MLT1E1 LTR MaLR -243 411 1 2150 144 0 0 chr2 131468465 131468757 -119219097 - AluSx SINE Alu -20 292 1 589 260 52 90 chr2 131468777 131469123 -119218731 - MLT1E1-int LTR MaLR -57 1314 982 343 248 80 40 chr2 131469289 131469414 -119218440 - MLT1E1-int LTR MaLR -507 864 735 813 110 16 0 chr2 131469437 131469564 -119218290 - L1MA6 LINE L1 -24 6276 6148 221 228 54 42 chr2 131469795 131469900 -119217954 + MIR SINE MIR 4 110 -98 1998 161 0 3 chr2 131470307 131470606 -119217248 - AluJb SINE Alu -14 298 1 679 208 31 8 chr2 131470728 131470858 -119216996 - FLAM_A SINE Alu 0 133 1 301 274 62 46 chr2 131472841 131473004 -119214850 - MIR SINE MIR -60 148 9 215 262 24 30 chr2 131473560 131473728 -119214126 + (GGGTG)n Simple_repeat Simple_repeat 1 167 0 240 214 71 0 chr2 131474539 131474609 -119213245 + L1ME4a LINE L1 5964 6038 -83 499 258 23 0 chr2 131474748 131474880 -119212974 - MLT1D LTR MaLR -4 501 367 1464 182 0 30 chr2 131474893 131475162 -119212692 + AluJb SINE Alu 34 294 -18 1194 224 31 4 chr2 131475336 131475591 -119212263 - AluJo SINE Alu -50 262 1 1219 263 86 27 chr2 131475654 131476140 -119211714 - L1MEc LINE L1 -3889 2507 2051 1346 174 4 29 chr2 131476140 131476382 -119211472 - MER46A DNA MER2_type 0 236 1 1219 263 86 27 chr2 131476382 131477752 -119210102 - L1MEc LINE L1 -4345 2051 492 433 352 63 31 chr2 131478526 131478844 -119209010 + L1M4 LINE L1 4853 5180 -966 1590 171 4 0 chr2 131479369 131479650 -119208204 + L1MA5 LINE L1 6019 6300 0 2024 154 9 9 chr2 131479650 131479663 -119208191 + L1PA15 LINE L1 5815 5827 -338 2026 133 20 0 chr2 131479663 131479964 -119207890 + AluSq SINE Alu 1 307 -6 2024 154 9 9 chr2 131479964 131480298 -119207556 + L1PA15 LINE L1 5826 6164 -1 23 0 0 0 chr2 131480313 131480336 -119207518 + AT_rich Low_complexity Low_complexity 1 23 0 1599 138 80 0 chr2 131481083 131481358 -119206496 + MSTA LTR MaLR 132 428 0 3912 161 52 7 chr2 131481362 131481499 -119206355 + MSTA-int LTR MaLR 5 134 -1517 5611 62 21 4 chr2 131481499 131482252 -119205602 - MER4E LTR ERV1 0 766 1 3912 161 52 7 chr2 131482252 131482845 -119205009 + MSTA-int LTR MaLR 134 768 -883 3555 142 5 73 chr2 131483110 131483757 -119204097 - LTR26 LTR ERV1 0 603 1 210 278 111 48 chr2 131483942 131484068 -119203786 - L2 LINE L2 0 3272 3139 305 203 0 16 chr2 131486323 131486387 -119201467 - MIR SINE MIR -63 145 83 3176 173 84 9 chr2 131488641 131489311 -119198543 + L1MB7 LINE L1 5455 6174 -10 343 319 6 25 chr2 131489357 131489514 -119198340 - L1ME LINE L1 -299 5822 5669 206 61 0 30 chr2 131490031 131490064 -119197790 + (CA)n Simple_repeat Simple_repeat 2 33 0 1480 221 104 25 chr2 131490711 131491026 -119196828 - LTR44 LTR ERV1 -2 517 150 2177 114 3 0 chr2 131491026 131491347 -119196507 - AluSg SINE Alu 0 310 1 1480 221 104 25 chr2 131491347 131491510 -119196344 - LTR44 LTR ERV1 -369 150 1 241 250 7 7 chr2 131491551 131491703 -119196151 + GA-rich Low_complexity Low_complexity 1 152 0 272 327 60 0 chr2 131492070 131492220 -119195634 + L2 LINE L2 2503 2661 -653 276 268 39 0 chr2 131492302 131492444 -119195410 - MER20B DNA MER1_type -92 691 543 268 313 109 20 chr2 131492545 131492849 -119195005 - MER20B DNA MER1_type -438 345 15 285 284 112 62 chr2 131492916 131493237 -119194617 + L2 LINE L2 2872 3208 -105 1591 191 99 14 chr2 131494220 131494582 -119193272 - MSTD LTR MaLR -1 395 3 182 208 42 62 chr2 131495519 131495567 -119192287 - MIR3 SINE MIR -48 160 114 452 336 53 10 chr2 131495735 131495943 -119191911 - MIR SINE MIR -23 239 23 272 106 85 0 chr2 131496021 131496068 -119191786 + L1P LINE L1 5280 5330 -835 2351 104 0 0 chr2 131496068 131496377 -119191477 + AluSc SINE Alu 1 309 0 6659 156 9 3 chr2 131496399 131497527 -119190327 + L1P LINE L1 4137 5271 -875 648 144 0 29 chr2 131497631 131497770 -119190084 + (TTCC)n Simple_repeat Simple_repeat 3 137 0 319 111 0 0 chr2 131497774 131497819 -119190035 - MER83C LTR ERV1 -108 265 221 1593 246 76 2 chr2 131497820 131498215 -119189639 - L1M3c LINE L1 -4903 1238 815 600 297 186 39 chr2 131498238 131498598 -119189256 - L1M3c LINE L1 -5727 414 2 360 303 74 6 chr2 131498625 131498787 -119189067 - L1MEc LINE L1 -5213 1183 1011 403 314 51 6 chr2 131498921 131499096 -119188758 - L1MEc LINE L1 -5915 290 108 2088 139 0 3 chr2 131499097 131499400 -119188454 - AluSx SINE Alu -10 302 1 282 330 9 19 chr2 131499433 131499539 -119188315 - MIR SINE MIR -64 144 40 522 105 116 32 chr2 131500474 131500569 -119187285 + AluSg/x SINE Alu 196 298 -11 237 98 0 0 chr2 131500580 131500621 -119187233 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1803 167 3 3 chr2 131501253 131501546 -119186308 - AluJb SINE Alu -19 293 1 315 306 85 22 chr2 131502620 131502891 -119184963 + L2 LINE L2 2387 2674 -640 456 305 72 89 chr2 131504226 131504574 -119183280 + L1MEd LINE L1 615 956 -5163 378 261 70 0 chr2 131504623 131504738 -119183116 + MLT1H1 LTR MaLR 345 467 -88 2055 96 14 0 chr2 131504853 131505135 -119182719 - AluY SINE Alu -20 291 6 397 217 130 0 chr2 131505229 131505344 -119182510 - HsTC2 DNA Tc2 -14 1884 1755 867 292 51 18 chr2 131505604 131505998 -119181856 + HsTC2 DNA Tc2 1304 1886 -12 5686 129 32 13 chr2 131505999 131506893 -119180961 - MER49 LTR ERV1 0 923 12 2200 105 3 3 chr2 131506893 131507188 -119180666 + AluSc SINE Alu 10 304 -5 1344 133 15 15 chr2 131507490 131507693 -119180161 - AluSg/x SINE Alu -26 284 82 25 0 0 0 chr2 131507693 131507718 -119180136 + AT_rich Low_complexity Low_complexity 1 25 0 35 24 0 0 chr2 131507796 131507838 -119180016 + AT_rich Low_complexity Low_complexity 1 42 0 21 71 0 0 chr2 131507870 131507912 -119179942 + AT_rich Low_complexity Low_complexity 1 42 0 321 306 50 28 chr2 131507955 131508135 -119179719 + MER31-int LTR ERV1 2468 2651 -2285 2455 77 0 13 chr2 131508155 131508468 -119179386 - AluSq SINE Alu 0 313 5 21 0 0 0 chr2 131508472 131508493 -119179361 + AT_rich Low_complexity Low_complexity 1 21 0 1930 132 17 0 chr2 131508493 131508782 -119179072 - AluSg SINE Alu -16 294 1 1057 246 50 13 chr2 131509109 131509410 -119178444 + LTR37A LTR ERV1 1 312 -114 1511 194 48 0 chr2 131509431 131509604 -119178250 - AluJb SINE Alu -4 308 114 195 42 0 0 chr2 131509604 131509628 -119178226 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1511 194 48 0 chr2 131509628 131509748 -119178106 - AluJb SINE Alu -198 114 1 324 216 14 0 chr2 131509799 131509873 -119177981 - MER105 DNA DNA -123 81 7 477 205 0 0 chr2 131510078 131510190 -119177664 + A-rich Low_complexity Low_complexity 1 112 0 1416 111 10 14 chr2 131510211 131510419 -119177435 + AluSx SINE Alu 1 207 -105 1633 122 4 4 chr2 131510553 131510799 -119177055 - L1P LINE L1 -1997 4149 3904 2150 110 0 0 chr2 131510835 131511144 -119176710 - AluSx SINE Alu 0 309 1 2606 266 97 54 chr2 131511184 131513025 -119174829 - L1ME LINE L1 -509 5653 3694 2883 102 0 3 chr2 131513025 131513388 -119174466 - THE1B LTR MaLR 0 364 3 2606 266 97 54 chr2 131513388 131513559 -119174295 - L1ME LINE L1 -2468 3694 3532 281 242 57 65 chr2 131513630 131513691 -119174163 - L1ME LINE L1 -2747 3399 3339 1826 160 7 14 chr2 131513691 131513984 -119173870 - AluJb SINE Alu -21 291 1 281 242 57 65 chr2 131513984 131514046 -119173808 - L1ME LINE L1 -2807 3339 3277 470 221 14 16 chr2 131514062 131514174 -119173680 - MLT1I LTR MaLR -286 123 21 1569 173 14 22 chr2 131515159 131515437 -119172417 + AluJo SINE Alu 24 299 -13 3766 225 37 7 chr2 131515439 131516467 -119171387 + L1M4 LINE L1 2373 3431 -2715 1009 154 0 0 chr2 131516470 131516626 -119171228 - MLT1B LTR MaLR -4 386 231 6265 213 34 29 chr2 131516763 131518398 -119169456 + L1M4 LINE L1 3429 5072 -1074 675 138 41 8 chr2 131518398 131518521 -119169333 + L1MB5 LINE L1 6048 6174 0 202 247 284 0 chr2 131518838 131518919 -119168935 - MIR SINE MIR -69 139 36 185 232 130 14 chr2 131519467 131519536 -119168318 - MIR SINE MIR -69 193 117 454 211 81 8 chr2 131519906 131520029 -119167825 + MER94 DNA DNA 2 133 -1 561 256 95 66 chr2 131521103 131521525 -119166329 + MLT1J1 LTR MaLR 11 444 -2 228 416 16 8 chr2 131521669 131521794 -119166060 - MIR SINE MIR -62 146 21 187 263 13 40 chr2 131522677 131522753 -119165101 - L2 LINE L2 -821 2493 2420 898 237 55 88 chr2 131523320 131523552 -119164302 + L1MC4 LINE L1 7549 7787 -255 2239 101 0 3 chr2 131523552 131523850 -119164004 - AluSx SINE Alu -15 297 1 898 237 55 88 chr2 131523850 131524127 -119163727 + L1MC4 LINE L1 7787 8041 -1 317 321 91 33 chr2 131525060 131525424 -119162430 + L1M4 LINE L1 1 385 -6157 3596 215 80 51 chr2 131525481 131526382 -119161472 + L1M4 LINE L1 533 1406 -5240 2078 158 3 0 chr2 131526382 131526693 -119161161 + AluSx SINE Alu 1 312 0 3596 215 80 51 chr2 131526693 131527786 -119160068 + L1M4 LINE L1 1406 2616 -4030 29 47 0 0 chr2 131527887 131527930 -119159924 + AT_rich Low_complexity Low_complexity 1 43 0 1222 141 5 0 chr2 131527949 131528134 -119159720 - L1MA3 LINE L1 0 6305 6120 518 99 49 0 chr2 131528170 131528251 -119159603 - L1MA3 LINE L1 -175 6130 6046 393 38 57 0 chr2 131528252 131528305 -119159549 - L1PB2 LINE L1 -6 6145 6090 393 38 57 0 chr2 131528319 131528372 -119159482 - L1PB2 LINE L1 -6 6145 6090 2632 77 3 0 chr2 131528372 131528694 -119159160 - L1PA7 LINE L1 -2 6152 5827 2186 132 7 3 chr2 131528702 131529012 -119158842 - AluSx SINE Alu -1 311 1 1967 110 22 16 chr2 131529013 131529332 -119158522 - L1PB1 LINE L1 -45 6106 5786 311 330 87 0 chr2 131529821 131529936 -119157918 + MIR SINE MIR 35 159 -103 4859 207 43 45 chr2 131530441 131531637 -119156217 - L1MC4a LINE L1 0 7808 6615 1048 216 24 0 chr2 131531630 131531838 -119156016 + L1MC4a LINE L1 6398 6610 -1198 * 367 183 73 24 chr2 131531842 131531939 -119155915 + L1ME3A LINE L1 5601 5702 -468 1801 163 14 3 chr2 131531946 131532240 -119155614 + AluJo SINE Alu 12 308 -4 499 103 35 0 chr2 131532244 131532331 -119155523 + GA-rich Low_complexity Low_complexity 2 91 0 643 239 162 19 chr2 131532342 131532650 -119155204 + L1ME3A LINE L1 5699 6097 -73 197 122 49 0 chr2 131532854 131532895 -119154959 + T-rich Low_complexity Low_complexity 3 45 0 2138 117 6 19 chr2 131532897 131533213 -119154641 - AluSx SINE Alu 0 312 1 601 224 114 28 chr2 131533215 131533505 -119154349 - L1M4 LINE L1 -1590 4556 4242 865 251 35 5 chr2 131533733 131534002 -119153852 - L1 LINE L1 -793 5353 5077 285 285 62 23 chr2 131534004 131534134 -119153720 - MER58C DNA MER1_type 0 215 81 371 231 50 16 chr2 131534199 131534320 -119153534 - L1 LINE L1 -1718 4428 4304 4389 172 20 21 chr2 131534381 131535226 -119152628 - L1MA6 LINE L1 -6 6294 5451 1276 143 9 5 chr2 131535326 131535542 -119152312 + AluSg/x SINE Alu 79 295 -17 376 200 50 17 chr2 131535569 131535689 -119152165 + Charlie1 DNA MER1_type 2609 2732 -29 1677 149 47 0 chr2 131535822 131536097 -119151757 + AluSx SINE Alu 18 305 -7 2187 106 7 3 chr2 131536401 131536694 -119151160 + AluSx SINE Alu 1 294 -18 2017 128 7 3 chr2 131536696 131536984 -119150870 + AluSq SINE Alu 1 289 -24 1027 124 12 12 chr2 131536999 131537160 -119150694 + BC200 scRNA scRNA 1 161 -39 1985 138 3 7 chr2 131537345 131537641 -119150213 - AluSx SINE Alu -17 295 1 577 285 102 40 chr2 131537875 131538088 -119149766 - L1MC/D LINE L1 -2090 5718 5483 2339 108 3 0 chr2 131538088 131538394 -119149460 - AluSp SINE Alu -6 307 1 577 285 102 40 chr2 131538394 131538454 -119149400 - L1MC/D LINE L1 -2325 5483 5428 1889 116 7 36 chr2 131538456 131538496 -119149358 - AluSc SINE Alu 0 309 269 203 0 0 36 chr2 131538496 131538524 -119149330 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1889 116 7 36 chr2 131538524 131538784 -119149070 - AluSc SINE Alu -40 269 18 30 0 0 0 chr2 131538799 131538829 -119149025 + AT_rich Low_complexity Low_complexity 1 30 0 193 274 20 0 chr2 131641398 131641449 -119046405 + MIR3 SINE MIR 111 162 -46 324 0 0 0 chr2 131641923 131641959 -119045895 + (CA)n Simple_repeat Simple_repeat 1 36 0 349 78 0 0 chr2 131643854 131643905 -119043949 - 5S rRNA rRNA -70 51 1 372 280 44 0 chr2 131644022 131644161 -119043693 - MIR SINE MIR -62 146 35 309 75 0 0 chr2 131645821 131645861 -119041993 - tRNA-Gln-CAA tRNA tRNA -35 40 1 291 251 80 54 chr2 131646859 131646986 -119040868 + L2 LINE L2 2323 2460 -854 2480 71 13 3 chr2 131646986 131647295 -119040559 + AluSx SINE Alu 1 312 0 291 251 80 54 chr2 131647295 131647406 -119040448 + L2 LINE L2 2460 2567 -747 2360 65 10 10 chr2 131647451 131647744 -119040110 + AluY SINE Alu 1 293 -18 325 261 117 0 chr2 131648491 131648602 -119039252 - MIR SINE MIR -84 178 55 2027 154 6 6 chr2 131650188 131650499 -119037355 + AluSx SINE Alu 1 311 -1 495 48 0 0 chr2 131650510 131650572 -119037282 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 * 722 11 11 0 chr2 131650558 131650645 -119037209 + (GAAAA)n Simple_repeat Simple_repeat 4 91 0 2455 69 0 16 chr2 131650942 131651245 -119036609 + AluY SINE Alu 2 299 -12 247 323 21 0 chr2 131651608 131651701 -119036153 + LTR67 LTR ERVL 461 555 -2 576 206 86 29 chr2 131652301 131652476 -119035378 + MER5A DNA MER1_type 1 185 -4 529 192 102 40 chr2 131653143 131653320 -119034534 + ORSL DNA AcHobo 1 188 -87 248 350 36 46 chr2 131653484 131653678 -119034176 + MIR3 SINE MIR 1 192 -16 209 314 93 0 chr2 131655342 131655428 -119032426 + MIR SINE MIR 54 147 -61 2350 91 0 13 chr2 131655494 131655802 -119032052 + AluSx SINE Alu 1 304 -8 365 57 0 19 chr2 131655802 131655855 -119031999 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 263 313 39 16 chr2 131656286 131656414 -119031440 - MERVL LTR ERVL -1773 3712 3582 438 322 84 39 chr2 131656658 131657083 -119030771 - MERVL LTR ERVL -2515 3249 2764 293 233 0 38 chr2 131657274 131657407 -119030447 + (CA)n Simple_repeat Simple_repeat 1 128 0 273 339 44 22 chr2 131657418 131657601 -119030253 - MERVL LTR ERVL -3115 2539 2353 634 333 24 37 chr2 131657641 131658022 -119029832 - MERVL LTR ERVL -3436 2328 1953 329 224 0 0 chr2 131658143 131658201 -119029653 - L2 LINE L2 -5 3308 3251 2206 125 0 3 chr2 131658243 131658538 -119029316 - AluSg SINE Alu -16 294 1 2031 205 43 48 chr2 131660956 131661052 -119026802 + L1ME4a LINE L1 4316 4411 -1735 2653 52 0 3 chr2 131661052 131661360 -119026494 + AluY SINE Alu 1 307 -4 2031 205 43 48 chr2 131661360 131661562 -119026292 + L1ME4a LINE L1 4411 4612 -1534 2313 99 3 0 chr2 131661562 131661855 -119025999 - AluSp SINE Alu -19 294 1 2031 205 43 48 chr2 131661855 131662165 -119025689 + L1ME4a LINE L1 4612 4922 -1224 731 263 107 44 chr2 131662272 131662293 -119025561 + L1ME4a LINE L1 5377 5395 -775 2329 110 0 0 chr2 131662293 131662592 -119025262 + AluSx SINE Alu 1 299 -13 731 263 107 44 chr2 131662592 131662954 -119024900 + L1ME4a LINE L1 5395 5784 -386 563 66 0 0 chr2 131662987 131663063 -119024791 - Alu SINE Alu -233 78 3 308 286 197 0 chr2 131663419 131663566 -119024288 + L1ME4a LINE L1 5851 6026 -95 343 192 27 14 chr2 131663961 131664034 -119023820 + AluJb SINE Alu 85 158 -144 974 221 33 0 chr2 131664463 131664703 -119023151 + L1MDa LINE L1 906 1153 -5387 3427 171 57 0 chr2 131664707 131665369 -119022485 + L1PA16 LINE L1 5453 6152 -14 298 222 28 0 chr2 131665692 131665764 -119022090 + L1MC5 LINE L1 7704 7777 -184 1074 235 7 92 chr2 131665773 131666195 -119021659 + L1M4 LINE L1 4475 4860 -1286 1458 192 19 61 chr2 131666240 131666771 -119021083 - L1M3 LINE L1 -688 5495 4973 2539 193 27 45 chr2 131666879 131667352 -119020502 - L1MC/D LINE L1 -442 5800 5320 1776 184 0 14 chr2 131667352 131667646 -119020208 - AluJo SINE Alu -22 290 1 2539 193 27 45 chr2 131667646 131667708 -119020146 - L1MC/D LINE L1 -922 5320 5258 793 159 8 0 chr2 131667708 131667840 -119020014 - FLAM_A SINE Alu 0 133 1 2539 193 27 45 chr2 131667840 131668274 -119019580 - L1MC/D LINE L1 -984 5258 4853 2925 224 27 113 chr2 131668388 131669409 -119018445 + L1MD3 LINE L1 6129 7039 -956 1945 135 6 37 chr2 131669409 131669758 -119018096 - MER44D DNA MER2_type 0 609 2 2925 224 27 113 chr2 131669758 131669907 -119017947 + L1MD3 LINE L1 7039 7199 -796 286 317 16 0 chr2 131669996 131670119 -119017735 + L1ME LINE L1 5695 5819 -302 25 51 0 0 chr2 131670203 131670242 -119017612 + AT_rich Low_complexity Low_complexity 1 39 0 719 143 0 0 chr2 131670243 131670362 -119017492 - AluSg/x SINE Alu -9 303 185 1084 265 133 43 chr2 131672035 131672736 -119015118 - L1MEd LINE L1 -3173 2956 2193 1283 64 12 0 chr2 131672758 131672929 -119014925 - L1PA7 LINE L1 -2 6152 5980 322 307 86 37 chr2 131673020 131673183 -119014671 - L1MEd LINE L1 -5947 172 2 375 217 87 0 chr2 131673308 131673322 -119014532 - L1MA10 LINE L1 0 6334 6321 2671 217 77 20 chr2 131673322 131674265 -119013589 - L1ME1 LINE L1 -5 6161 5164 2002 134 3 13 chr2 131674266 131674573 -119013281 - AluSg SINE Alu 0 310 7 279 79 0 0 chr2 131674773 131674811 -119013043 + (GGGA)n Simple_repeat Simple_repeat 2 39 0 1170 267 61 8 chr2 131674836 131675196 -119012658 - MER74B LTR ERVL -10 612 234 2430 90 0 0 chr2 131675216 131675516 -119012338 + AluSq SINE Alu 1 300 -13 2075 239 43 3 chr2 131676043 131676628 -119011226 + L1ME1 LINE L1 707 1314 -5095 1542 249 61 6 chr2 131676615 131677125 -119010729 + L1ME1 LINE L1 2689 3226 -3180 * 252 259 112 83 chr2 131677528 131677733 -119010121 + L2 LINE L2 2939 3149 -123 486 214 167 69 chr2 131677755 131678031 -119009823 + MLT1E2 LTR MaLR 1 303 -323 212 304 14 0 chr2 131678533 131678602 -119009252 - L2 LINE L2 0 3272 3203 242 329 146 12 chr2 131679258 131679422 -119008432 + MIR SINE MIR 69 254 -8 290 313 94 0 chr2 131680394 131680522 -119007332 + MIR SINE MIR 49 188 -74 1570 235 74 31 chr2 131680895 131680977 -119006877 + L1ME1 LINE L1 5135 5212 -1382 216 0 0 0 chr2 131680977 131681001 -119006853 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1570 235 74 31 chr2 131681001 131682101 -119005753 + L1ME1 LINE L1 5212 6582 -12 313 275 0 0 chr2 131683604 131683673 -119004181 - L2 LINE L2 -4 3309 3241 1200 219 61 7 chr2 131684508 131684786 -119003068 + MER21B LTR ERV1 520 812 -51 286 185 251 0 chr2 131684911 131685016 -119002838 + AluJ/FLAM SINE Alu 6 76 -226 983 210 28 23 chr2 131685051 131685169 -119002685 + MER58A DNA MER1_type 6 127 -2293 1567 214 45 16 chr2 131685169 131685548 -119002306 + MLT1B LTR MaLR 1 390 0 983 210 28 23 chr2 131685548 131685643 -119002211 + MER58A DNA MER1_type 127 220 -4 260 291 51 0 chr2 131685809 131685888 -119001966 - L2 LINE L2 -36 3236 3154 183 200 0 0 chr2 131686174 131686214 -119001640 + MIR SINE MIR 178 217 -45 523 281 71 69 chr2 131686215 131686460 -119001394 + L1MEd LINE L1 818 1061 -5249 2250 119 0 0 chr2 131686460 131686755 -119001099 - AluSx SINE Alu -15 297 3 523 281 71 69 chr2 131686755 131687204 -119000650 + L1MEd LINE L1 1061 1559 -4751 2403 93 0 3 chr2 131687204 131687506 -119000348 - AluSg SINE Alu -9 301 1 523 281 71 69 chr2 131687506 131687618 -119000236 + L1MEd LINE L1 1559 1669 -4641 2435 90 0 13 chr2 131687906 131688218 -118999636 - AluSq SINE Alu -5 308 1 773 247 72 39 chr2 131688269 131688559 -118999295 + L1MEd LINE L1 2738 3050 -3079 2082 109 28 0 chr2 131688559 131688844 -118999010 - AluSx SINE Alu -19 293 1 773 247 72 39 chr2 131688844 131689010 -118998844 + L1MEd LINE L1 3050 3209 -2920 285 289 106 22 chr2 131689012 131689204 -118998650 + MLT1J2 LTR MaLR 1 206 -244 258 293 42 28 chr2 131689410 131689622 -118998232 + L1MEd LINE L1 3207 3421 -2708 246 203 101 14 chr2 131689614 131689683 -118998171 + L1M4 LINE L1 4534 4608 -1538 * 1165 152 0 0 chr2 131689689 131689853 -118998001 - AluJb SINE Alu -13 299 136 864 168 35 49 chr2 131689862 131690088 -118997766 + L1M4 LINE L1 4616 4838 -1308 672 329 62 25 chr2 131690861 131691414 -118996440 + HAL1 LINE L1 470 1042 -1465 * 5913 222 97 33 chr2 131691407 131692129 -118995725 + L1MDa LINE L1 3 678 -5862 2867 76 60 62 chr2 131692129 131692616 -118995238 + LTR19A LTR ERV1 1 486 0 5913 222 97 33 chr2 131692616 131693246 -118994608 + L1MDa LINE L1 678 1266 -5274 509 15 31 0 chr2 131693246 131693311 -118994543 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 5913 222 97 33 chr2 131693311 131693843 -118994011 + L1MDa LINE L1 1266 2008 -4532 1019 238 59 18 chr2 131693840 131694181 -118993673 - L1M4 LINE L1 -1151 4995 4641 * 198 0 0 0 chr2 131694214 131694236 -118993618 + (TC)n Simple_repeat Simple_repeat 1 22 0 411 21 0 0 chr2 131694238 131694286 -118993568 + (CA)n Simple_repeat Simple_repeat 2 49 0 314 284 126 55 chr2 131694378 131694561 -118993293 - MIR3 SINE MIR -4 204 9 1660 104 43 4 chr2 131694809 131695039 -118992815 + AluSg SINE Alu 54 292 -18 2616 58 0 3 chr2 131695140 131695452 -118992402 + AluY SINE Alu 1 311 0 227 343 19 28 chr2 131695713 131695821 -118992033 + L2 LINE L2 3164 3270 -2 253 217 87 0 chr2 131695856 131695925 -118991929 + L1M4 LINE L1 4739 4813 -1333 228 269 0 0 chr2 131696024 131696091 -118991763 + L1M4 LINE L1 5122 5188 -958 1865 111 4 0 chr2 131696094 131696338 -118991516 + AluSx SINE Alu 3 247 -65 289 307 91 57 chr2 131696442 131696535 -118991319 + L1M4 LINE L1 3472 3560 -2586 2484 70 0 7 chr2 131696535 131696833 -118991021 - AluY SINE Alu -15 296 1 289 307 91 57 chr2 131696833 131697192 -118990662 + L1M4 LINE L1 3560 3939 -2207 2375 97 0 6 chr2 131697361 131697672 -118990182 + AluSg SINE Alu 1 309 -1 534 193 20 93 chr2 131697684 131697834 -118990020 + MSTD LTR MaLR 1 139 -257 299 0 0 0 chr2 131697837 131697874 -118989980 + AluY SINE Alu 1 37 -262 232 301 35 44 chr2 131698222 131698335 -118989519 - MIR SINE MIR -48 214 103 568 323 0 5 chr2 131698720 131698909 -118988945 - MIR SINE MIR -74 188 1 390 204 0 0 chr2 131698911 131698999 -118988855 + (TG)n Simple_repeat Simple_repeat 2 89 0 599 251 123 5 chr2 131699228 131699431 -118988423 - MIR SINE MIR -4 258 32 1053 233 37 21 chr2 131700600 131700905 -118986949 + MLT1A1 LTR MaLR 1 348 -42 617 291 11 11 chr2 131701691 131701873 -118985981 + L2 LINE L2 530 711 -2603 281 324 141 52 chr2 131701870 131701918 -118985936 - MIR SINE MIR -29 233 191 * 1775 123 71 0 chr2 131701918 131702206 -118985648 + AluSx SINE Alu 2 312 0 281 324 141 52 chr2 131702206 131702370 -118985484 - MIR SINE MIR -71 191 2 26 0 0 0 chr2 131702376 131702402 -118985452 + AT_rich Low_complexity Low_complexity 1 26 0 1791 186 21 0 chr2 131702402 131702693 -118985161 + AluJo SINE Alu 1 297 -15 180 358 25 0 chr2 131702910 131702991 -118984863 + MIR SINE MIR 46 128 -80 238 225 106 20 chr2 131702998 131703099 -118984755 + MIR SINE MIR 4 111 -105 514 167 26 26 chr2 131703183 131703309 -118984545 + L1MA8 LINE L1 5706 5831 -323 1005 143 0 0 chr2 131703309 131703456 -118984398 + FRAM SINE Alu 22 168 -8 2576 142 24 2 chr2 131703456 131703914 -118983940 + L1MA8 LINE L1 5814 6281 -10 1323 205 119 48 chr2 131704531 131704926 -118982928 + LTR40c LTR ERVL 2 430 -35 777 253 103 0 chr2 131704926 131705120 -118982734 + MER58C DNA MER1_type 1 214 -1 1323 205 119 48 chr2 131705120 131705143 -118982711 + LTR40c LTR ERVL 430 450 -15 450 279 73 81 chr2 131705285 131705557 -118982297 - L2 LINE L2 -19 3294 3025 971 163 0 12 chr2 131705570 131705730 -118982124 - FRAM SINE Alu -19 157 1 542 195 23 0 chr2 131705823 131705951 -118981903 + L1MA8 LINE L1 6161 6291 0 351 316 115 14 chr2 131706393 131706539 -118981315 + MIR SINE MIR 25 200 -62 2432 64 13 3 chr2 131706539 131706837 -118981017 + AluY SINE Alu 1 301 -10 351 316 115 14 chr2 131706837 131706899 -118980955 + MIR SINE MIR 200 254 -8 1143 200 132 51 chr2 131707488 131707898 -118979956 + MSTB2 LTR MaLR 15 457 0 249 270 157 0 chr2 131708165 131708280 -118979574 + L1M4 LINE L1 3 135 -6407 * 1595 192 73 3 chr2 131708277 131708666 -118979188 + L1MD1 LINE L1 5825 6239 -3 2468 84 10 0 chr2 131709615 131709923 -118977931 - AluSq SINE Alu -2 311 1 537 252 82 7 chr2 131709992 131710139 -118977715 - MIR SINE MIR -80 182 25 341 157 0 0 chr2 131711633 131711684 -118976170 + L1MC4 LINE L1 6653 6703 -1339 2407 90 0 0 chr2 131711687 131711977 -118975877 - AluSq SINE Alu -23 290 1 305 326 107 30 chr2 131713762 131714099 -118973755 + L2 LINE L2 2379 2741 -573 893 243 87 1 chr2 131714114 131714540 -118973314 + MLT1D LTR MaLR 3 504 -1 217 288 111 0 chr2 131714684 131714837 -118973017 + L2 LINE L2 2890 3059 -213 2439 70 33 0 chr2 131715006 131715307 -118972547 + AluY SINE Alu 1 311 0 302 123 31 0 chr2 131715629 131715694 -118972160 + L1M4 LINE L1 2895 2961 -3185 2364 95 7 0 chr2 131715695 131716000 -118971854 + AluSg SINE Alu 1 307 -3 2425 262 34 18 chr2 131716006 131716747 -118971107 + L1M4 LINE L1 3297 4049 -2097 1564 190 3 45 chr2 131716831 131717142 -118970712 - AluSq SINE Alu -15 298 1 446 315 188 20 chr2 131717189 131717499 -118970355 + L3 LINE CR1 874 1265 -312 243 0 0 0 chr2 131717499 131717526 -118970328 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 446 315 188 20 chr2 131717526 131717609 -118970245 + L3 LINE CR1 1265 1333 -244 219 352 23 0 chr2 131717833 131717921 -118969933 + L3 LINE CR1 1341 1430 -147 3480 211 34 60 chr2 131718347 131718484 -118969370 - L1MB8 LINE L1 -12 6235 6096 2143 125 7 3 chr2 131718484 131718788 -118969066 - AluSx SINE Alu -7 305 1 3480 211 34 60 chr2 131718788 131719019 -118968835 - L1MB8 LINE L1 -151 6096 5860 2500 65 13 7 chr2 131719019 131719328 -118968526 - AluY SINE Alu 0 311 1 3480 211 34 60 chr2 131719328 131719893 -118967961 - L1MB8 LINE L1 -387 5860 5282 1236 112 15 0 chr2 131719893 131720090 -118967764 - L1PB1 LINE L1 -1 6150 5951 3480 211 34 60 chr2 131720090 131720157 -118967697 - L1MB8 LINE L1 -965 5282 5215 811 168 0 0 chr2 131720157 131720288 -118967566 - FLAM_C SINE Alu -2 131 1 3480 211 34 60 chr2 131720288 131720353 -118967501 - L1MB8 LINE L1 -1032 5215 5210 2150 121 10 0 chr2 131720353 131720643 -118967211 - AluSg SINE Alu -17 293 1 3480 211 34 60 chr2 131720643 131720751 -118967103 - L1MB8 LINE L1 -1037 5210 5101 2128 136 3 3 chr2 131720755 131721065 -118966789 - AluSx SINE Alu -2 310 1 1082 97 0 0 chr2 131721065 131721199 -118966655 - AluY SINE Alu -177 134 1 1737 223 78 63 chr2 131721207 131721649 -118966205 - L1MB8 LINE L1 -3436 2779 2345 2260 88 9 31 chr2 131721649 131721969 -118965885 + AluSp SINE Alu 1 313 0 1737 223 78 63 chr2 131721969 131722431 -118965423 - L1MB8 LINE L1 -3870 2345 1883 2579 54 0 32 chr2 131722501 131722814 -118965040 - AluY SINE Alu -8 303 1 1066 35 0 7 chr2 131722938 131723080 -118964774 - L1PA4 LINE L1 0 6155 6015 556 323 0 0 chr2 131723162 131723351 -118964503 - L1MEc LINE L1 -4574 2564 2376 * 1456 239 121 21 chr2 131723332 131723904 -118963950 - L1MEc LINE L1 -4968 1887 1259 1761 197 50 28 chr2 131723971 131724468 -118963386 + MER77 LTR ERV1 18 605 0 1566 282 68 12 chr2 131724468 131724580 -118963274 - L1MEc LINE L1 -6010 849 745 2167 78 11 18 chr2 131724580 131724912 -118962942 + AluY SINE Alu 1 330 0 1566 282 68 12 chr2 131724912 131725359 -118962495 - L1MEc LINE L1 -6114 745 256 243 295 76 19 chr2 131725442 131725547 -118962307 + L2 LINE L2 3169 3279 -34 339 309 7 50 chr2 131725703 131725842 -118962012 - MIR SINE MIR -73 189 57 292 252 98 8 chr2 131727539 131727662 -118960192 + L2 LINE L2 3138 3271 -1 256 298 237 0 chr2 131727769 131727883 -118959971 - MIR SINE MIR -71 191 51 2148 118 14 0 chr2 131729889 131730185 -118957669 + AluSx SINE Alu 1 300 -12 180 291 23 47 chr2 131731322 131731408 -118956446 + L2 LINE L2 3173 3256 -16 287 333 63 0 chr2 131732189 131732315 -118955539 - MIR SINE MIR -51 211 78 468 263 168 26 chr2 131732829 131733282 -118954572 + MER90 LTR ERV1 97 613 -1 1336 81 0 0 chr2 131734157 131734317 -118953537 + AluSc SINE Alu 1 160 -149 1261 101 75 25 chr2 131734317 131734516 -118953338 - AluJo SINE Alu -103 209 1 2035 104 18 7 chr2 131734635 131734914 -118952940 + AluSq SINE Alu 4 285 -28 213 39 0 0 chr2 131734914 131734940 -118952914 + (TA)n Simple_repeat Simple_repeat 2 27 0 744 256 1 6 chr2 131736148 131736165 -118951689 + MIR SINE MIR 40 56 -206 261 57 0 0 chr2 131736165 131736200 -118951654 + (CATAT)n Simple_repeat Simple_repeat 5 39 0 744 256 1 6 chr2 131736200 131736359 -118951495 + MIR SINE MIR 56 210 -52 1625 192 35 0 chr2 131736366 131736741 -118951113 + L1MA9 LINE L1 5925 6312 0 598 248 143 21 chr2 131738734 131739020 -118948834 + L2 LINE L2 2853 3173 -140 2142 135 3 3 chr2 131739153 131739465 -118948389 + AluSx SINE Alu 1 312 0 2211 96 0 18 chr2 131739492 131739772 -118948082 + AluSx SINE Alu 3 277 -35 354 45 0 0 chr2 131739775 131739819 -118948035 + (GAAA)n Simple_repeat Simple_repeat 1 44 0 367 314 86 23 chr2 131740143 131740778 -118947076 - L1ME3A LINE L1 -281 5881 5186 2441 78 0 3 chr2 131740850 131741146 -118946708 + AluY SINE Alu 1 295 -16 548 320 121 54 chr2 131741146 131741238 -118946616 - L1ME3A LINE L1 -2995 3151 3067 1485 171 4 12 chr2 131741238 131741483 -118946371 - AluJb SINE Alu -69 243 1 548 320 121 54 chr2 131741483 131741778 -118946076 - L1ME3A LINE L1 -3079 3067 2738 536 266 13 62 chr2 131742833 131742914 -118944940 + L1MEd LINE L1 2 85 -6034 2154 88 58 0 chr2 131742914 131743209 -118944645 + AluSp SINE Alu 1 312 -1 536 266 13 62 chr2 131743209 131743353 -118944501 + L1MEd LINE L1 85 216 -5903 2379 79 0 20 chr2 131744190 131744494 -118943360 - AluY SINE Alu -13 298 1 454 152 0 31 chr2 131744526 131744755 -118943099 + AluJo SINE Alu 5 311 -1 6436 112 236 24 chr2 131744757 131744885 -118942969 + L1PA6 LINE L1 3663 3763 -2392 2052 110 7 36 chr2 131744885 131745186 -118942668 + AluSx SINE Alu 1 292 -20 3056 60 0 0 chr2 131745190 131745593 -118942261 + L1PA6 LINE L1 5751 6153 -1 6436 112 236 24 chr2 131745593 131746980 -118940874 + L1PA6 LINE L1 3765 5507 -648 32 33 0 33 chr2 131747513 131747537 -118940317 + AT_rich Low_complexity Low_complexity 1 24 -35 2241 77 0 18 chr2 131747537 131747672 -118940182 + AluSc SINE Alu 1 137 -163 2232 102 0 45 chr2 131747672 131747985 -118939869 + AluSq SINE Alu 1 299 -14 2241 77 0 18 chr2 131747985 131748154 -118939700 + AluSc SINE Alu 137 300 0 32 33 0 33 chr2 131748154 131748189 -118939665 + AT_rich Low_complexity Low_complexity 24 59 0 325 317 166 0 chr2 131748502 131748720 -118939134 - L2 LINE L2 -308 3005 2758 1424 144 29 7 chr2 131748720 131748998 -118938856 - L1MB7 LINE L1 -343 5841 5558 482 259 117 25 chr2 131750294 131750491 -118937363 + MIR SINE MIR 31 245 -17 2749 42 0 0 chr2 131750599 131750907 -118936947 + AluY SINE Alu 1 308 -3 1257 177 22 29 chr2 131751304 131751581 -118936273 - L1MB8 LINE L1 -10 6168 5894 2861 175 13 77 chr2 131751586 131751943 -118935911 - L1MB2 LINE L1 -2 6169 5791 2246 111 0 19 chr2 131751943 131752259 -118935595 + AluSx SINE Alu 1 310 -2 2861 175 13 77 chr2 131752259 131752274 -118935580 - L1MB2 LINE L1 -380 5791 5777 216 0 0 0 chr2 131752274 131752298 -118935556 + (CA)n Simple_repeat Simple_repeat 2 25 0 2861 175 13 77 chr2 131752298 131752696 -118935158 - L1MB2 LINE L1 -394 5777 5355 2292 109 0 0 chr2 131752696 131752989 -118934865 - AluSx SINE Alu -19 293 1 2861 175 13 77 chr2 131752989 131753165 -118934689 - L1MB2 LINE L1 -816 5355 5169 2558 57 0 25 chr2 131753165 131753479 -118934375 - AluY SINE Alu -5 306 1 2861 175 13 77 chr2 131753479 131753641 -118934213 - L1MB2 LINE L1 -1002 5169 5036 2314 117 0 0 chr2 131753641 131753940 -118933914 - AluSx SINE Alu -13 299 1 2861 175 13 77 chr2 131753940 131754044 -118933810 - L1MB2 LINE L1 -1135 5036 4927 15646 179 56 24 chr2 131754044 131755484 -118932370 - ERVL LTR ERVL -2132 3632 2240 1912 143 53 41 chr2 131755484 131755575 -118932279 + MER7A DNA MER2_type 1 89 -2949 2306 119 0 13 chr2 131755575 131755887 -118931967 - AluSx SINE Alu -4 308 1 1912 143 53 41 chr2 131755887 131756137 -118931717 + MER7A DNA MER2_type 89 344 -2 15646 179 56 24 chr2 131756137 131756580 -118931274 - ERVL LTR ERVL -3524 2240 1813 2057 215 27 5 chr2 131756580 131757027 -118930827 + MER65C LTR ERV1 1 457 -4 15646 179 56 24 chr2 131757027 131758224 -118929630 - ERVL LTR ERVL -3951 1813 452 2384 88 0 0 chr2 131760333 131760639 -118927215 + AluSq SINE Alu 1 306 -7 2593 61 0 6 chr2 131760695 131761008 -118926846 + AluY SINE Alu 1 311 0 370 256 11 0 chr2 131761733 131761823 -118926031 - MER81 DNA DNA 0 114 24 631 316 121 13 chr2 131762315 131763004 -118924850 + L1ME LINE L1 4377 5139 -1007 1985 94 35 42 chr2 131763017 131763151 -118924703 + AluSc SINE Alu 1 134 -175 2509 82 0 0 chr2 131763151 131763457 -118924397 + AluY SINE Alu 1 306 -5 1985 94 35 42 chr2 131763457 131763642 -118924212 + AluSc SINE Alu 134 309 0 598 223 91 10 chr2 131763671 131763868 -118923986 + L1ME LINE L1 5257 5469 -701 3667 203 61 18 chr2 131764015 131765706 -118922148 + L1MB7 LINE L1 4392 6148 -36 321 102 0 0 chr2 131765728 131765777 -118922077 + L1MB8 LINE L1 6125 6173 -5 927 158 0 0 chr2 131767425 131767590 -118920264 + (TCCA)n Simple_repeat Simple_repeat 1 165 0 1829 155 11 0 chr2 131767738 131768003 -118919851 + AluJb SINE Alu 31 298 -14 2205 91 0 11 chr2 131768044 131768351 -118919503 + AluY SINE Alu 1 304 0 400 76 167 0 chr2 131768352 131768418 -118919436 - MLT1B LTR MaLR -308 82 6 205 314 0 0 chr2 131768532 131768602 -118919252 - MIR SINE MIR -5 257 188 2209 111 0 13 chr2 131769289 131769624 -118918230 - AluSg SINE Alu 0 310 2 536 268 105 29 chr2 131769845 131770151 -118917703 + Charlie2 DNA MER1_type 2491 2819 -43 2313 139 57 34 chr2 131770342 131770682 -118917172 + MSTA LTR MaLR 1 331 -97 198 0 0 0 chr2 131770682 131770704 -118917150 + (TTTTC)n Simple_repeat Simple_repeat 1 22 0 919 66 15 7 chr2 131770706 131770842 -118917012 + (TTCC)n Simple_repeat Simple_repeat 4 140 0 2185 97 4 0 chr2 131770844 131771123 -118916731 - AluSx SINE Alu -32 280 1 2313 139 57 34 chr2 131771123 131771194 -118916660 + MSTA LTR MaLR 331 428 0 1601 214 15 38 chr2 131771455 131771852 -118916002 + MLT1B LTR MaLR 3 390 0 405 0 0 0 chr2 131772248 131772259 -118915595 + (CA)n Simple_repeat Simple_repeat 1 11 -364 2127 102 34 14 chr2 131772259 131772553 -118915301 + AluY SINE Alu 1 300 -11 405 0 0 0 chr2 131772553 131772578 -118915276 + (CA)n Simple_repeat Simple_repeat 10 375 0 405 0 0 0 chr2 131772578 131772623 -118915231 + (CA)n Simple_repeat Simple_repeat 2 46 0 2624 194 21 46 chr2 131772632 131773283 -118914571 - L1MC3 LINE L1 -7 7778 7144 2414 193 65 38 chr2 131773286 131773899 -118913955 - L1MC3 LINE L1 -802 6983 6354 1628 250 89 38 chr2 131773888 131774278 -118913576 - L1MCb LINE L1 -3356 3208 2839 * 2179 119 3 0 chr2 131774278 131774572 -118913282 + AluSx SINE Alu 1 295 -17 1628 250 89 38 chr2 131774572 131775307 -118912547 - L1MCb LINE L1 -3725 2839 2058 2185 139 0 0 chr2 131775307 131775602 -118912252 - AluSx SINE Alu -17 295 1 637 222 52 117 chr2 131775613 131775887 -118911967 - L1MCb LINE L1 -4861 1703 1413 2526 63 0 0 chr2 131775887 131776188 -118911666 - AluY SINE Alu -10 301 1 637 222 52 117 chr2 131776188 131776206 -118911648 - L1MCb LINE L1 -5151 1413 1395 1508 165 72 72 chr2 131776206 131776535 -118911319 + THE1C LTR MaLR 1 332 -43 2411 71 3 0 chr2 131776535 131776831 -118911023 - AluY SINE Alu -14 297 1 1508 165 72 72 chr2 131776831 131776876 -118910978 + THE1C LTR MaLR 331 375 0 637 222 52 117 chr2 131776876 131777059 -118910795 - L1MCb LINE L1 -5169 1395 1258 578 125 0 0 chr2 131777067 131777163 -118910691 - L1MB4 LINE L1 0 6180 6085 2204 177 47 113 chr2 131777171 131777943 -118909911 + LTR8A LTR ERV1 11 691 0 3354 180 31 68 chr2 131777944 131778441 -118909413 - L1MB4 LINE L1 -91 6089 5575 2109 104 26 32 chr2 131778441 131778749 -118909105 - AluSx SINE Alu -6 306 1 3354 180 31 68 chr2 131778749 131778938 -118908916 - L1MB4 LINE L1 -605 5575 5381 2392 81 7 0 chr2 131778938 131779235 -118908619 - AluSg SINE Alu -11 299 1 3354 180 31 68 chr2 131779235 131779860 -118907994 - L1MB4 LINE L1 -799 5381 4823 5934 214 41 48 chr2 131781133 131781433 -118906421 - L1MB4 LINE L1 -1358 4788 4488 2603 49 0 0 chr2 131781433 131781741 -118906113 + AluY SINE Alu 1 308 -3 5934 214 41 48 chr2 131781741 131781767 -118906087 - L1MB4 LINE L1 -1658 4488 4463 2055 115 3 18 chr2 131781767 131782073 -118905781 - AluSp SINE Alu 0 302 1 2510 69 0 0 chr2 131782083 131782386 -118905468 - AluY SINE Alu -8 303 1 5934 214 41 48 chr2 131782386 131783127 -118904727 - L1MB4 LINE L1 -1692 4454 3710 2216 97 28 0 chr2 131783127 131783417 -118904437 - AluSq SINE Alu -15 298 1 5934 214 41 48 chr2 131783417 131783720 -118904134 - L1MB4 LINE L1 -2436 3710 3407 2272 125 0 3 chr2 131783720 131784032 -118903822 - AluSx SINE Alu -1 311 1 5934 214 41 48 chr2 131784032 131784530 -118903324 - L1MB4 LINE L1 -2739 3407 2917 1982 226 62 80 chr2 131784531 131785149 -118902705 - L1MCb LINE L1 -4851 1194 566 2465 67 13 0 chr2 131785149 131785448 -118902406 - AluY SINE Alu -8 303 1 1982 226 62 80 chr2 131785448 131785730 -118902124 - L1MCb LINE L1 -5479 566 417 2579 53 3 0 chr2 131785730 131786030 -118901824 + AluY SINE Alu 1 301 -10 1982 226 62 80 chr2 131786030 131786438 -118901416 - L1MCb LINE L1 -5628 417 3 320 243 153 0 chr2 131786673 131786784 -118901070 + L1MC/D LINE L1 5701 5828 -1980 1571 137 14 48 chr2 131786855 131787066 -118900788 + MER49 LTR ERV1 1 201 -722 2174 140 0 0 chr2 131787066 131787358 -118900496 - AluJb SINE Alu -15 297 6 1571 137 14 48 chr2 131787358 131787438 -118900416 + MER49 LTR ERV1 201 282 -641 719 196 18 42 chr2 131787475 131787662 -118900192 + LTR39 LTR ERV1 401 620 -159 768 219 11 27 chr2 131787715 131787902 -118899952 + MER4D LTR ERV1 720 903 0 1192 221 149 2 chr2 131788029 131788446 -118899408 + LTR54B LTR ERV1 19 496 -2 203 333 0 0 chr2 131788644 131788710 -118899144 + CT-rich Low_complexity Low_complexity 2 67 0 208 232 29 72 chr2 131789598 131789667 -118898187 - L2 LINE L2 -1 3271 3206 322 314 119 0 chr2 131789831 131789990 -118897864 + MIR SINE MIR 20 197 -65 1699 134 16 52 chr2 131790931 131791237 -118896617 + AluJb SINE Alu 13 307 -5 576 167 58 0 chr2 131791238 131791358 -118896496 + MSTB1 LTR MaLR 306 432 0 513 234 24 0 chr2 131791522 131791646 -118896208 + Ricksha_b DNA DNA 3 129 -1125 4611 139 48 66 chr2 131791649 131792644 -118895210 + Ricksha_b DNA DNA 239 1215 -39 343 188 0 0 chr2 131792767 131792831 -118895023 - Ricksha_b DNA DNA -1177 77 14 521 281 14 7 chr2 131799044 131799183 -118888671 - MIR SINE MIR -87 175 36 588 139 16 16 chr2 131800450 131800572 -118887282 + CT-rich Low_complexity Low_complexity 3 124 0 1252 107 0 36 chr2 131800572 131800768 -118887086 - AluSc SINE Alu -39 270 82 2237 82 7 7 chr2 131800771 131801076 -118886778 - AluY SINE Alu -6 305 1 332 339 42 10 chr2 131801207 131801399 -118886455 - L2 LINE L2 -238 3034 2837 32 43 0 0 chr2 131802634 131802680 -118885174 + GC_rich Low_complexity Low_complexity 1 46 0 25 75 0 0 chr2 131802753 131802806 -118885048 + GC_rich Low_complexity Low_complexity 1 53 0 2251 75 0 7 chr2 131804445 131804739 -118883115 + AluY SINE Alu 18 309 -2 22 56 0 0 chr2 131804997 131805033 -118882821 + AT_rich Low_complexity Low_complexity 1 36 0 2181 94 7 0 chr2 131805078 131805376 -118882478 - AluSp SINE Alu -13 300 1 4773 156 47 25 chr2 131805385 131806783 -118881071 - L1MB4 LINE L1 0 6180 4745 1965 124 0 3 chr2 131806848 131807131 -118880723 - AluSx SINE Alu -29 283 2 2100 103 7 3 chr2 131807294 131807584 -118880270 + AluSq SINE Alu 1 291 -22 213 94 0 0 chr2 131807866 131807898 -118879956 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 448 236 84 63 chr2 131807898 131808089 -118879765 - L2 LINE L2 -7 3306 3112 325 249 111 61 chr2 131808104 131808463 -118879391 + L1ME4a LINE L1 5661 6040 -81 387 0 0 0 chr2 131808522 131808565 -118879289 + (CA)n Simple_repeat Simple_repeat 2 44 0 453 181 138 32 chr2 131808566 131808660 -118879194 + Tigger3(Golem) DNA MER2_type 2 105 -2924 427 173 0 27 chr2 131809232 131809307 -118878547 + AluSq SINE Alu 1 73 -230 1625 105 8 4 chr2 131809338 131809576 -118878278 + AluSq SINE Alu 68 306 -7 462 287 90 17 chr2 131809658 131810009 -118877845 - LTR16C LTR ERVL 0 491 97 522 242 128 86 chr2 131810187 131810835 -118877019 - L1MEd LINE L1 -4883 1236 562 2184 99 0 0 chr2 131810855 131811149 -118876705 + AluSq SINE Alu 3 296 -17 1042 222 78 64 chr2 131811322 131811682 -118876172 + MLT1A1 LTR MaLR 1 365 0 1056 101 0 20 chr2 131812315 131812463 -118875391 + AluSq/x SINE Alu 1 145 -168 1094 220 214 52 chr2 131812476 131813065 -118874789 - HAL1 LINE L1 -518 1989 1278 2596 16 7 0 chr2 131813065 131813370 -118874484 - AluYb8 SINE Alu -11 307 1 1094 220 214 52 chr2 131813370 131813448 -118874406 - HAL1 LINE L1 -1229 1278 1214 355 241 83 121 chr2 131813575 131813840 -118874014 - HAL1 LINE L1 -1404 1103 849 2265 87 24 9 chr2 131814607 131814942 -118872912 - MER57-int LTR ERV1 -2366 5171 4832 1535 163 7 18 chr2 131815772 131816055 -118871799 + AluJo SINE Alu 1 280 -32 231 36 0 0 chr2 131816058 131816086 -118871768 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 1958 129 7 10 chr2 131816086 131816395 -118871459 + AluSq SINE Alu 1 308 -5 333 245 85 11 chr2 131816609 131816703 -118871151 - L1MCa LINE L1 -3874 2552 2452 866 104 0 22 chr2 131816706 131816840 -118871014 - MER57-int LTR ERV1 -2395 5142 5012 530 277 101 52 chr2 131817032 131817403 -118870451 - L1MCa LINE L1 -4561 1865 1305 2355 79 0 0 chr2 131817403 131817707 -118870147 - AluY SINE Alu -7 304 1 530 277 101 52 chr2 131817707 131817798 -118870056 - L1MCa LINE L1 -5121 1305 1220 411 233 128 12 chr2 131818512 131818684 -118869170 - L1MC/D LINE L1 -2001 5807 5616 682 248 7 7 chr2 131818734 131818875 -118868979 + MIR SINE MIR 38 178 -84 690 288 81 9 chr2 131818882 131819260 -118868594 - L1MC/D LINE L1 -706 5456 5192 2062 115 7 3 chr2 131819391 131819686 -118868168 + AluSc SINE Alu 1 296 -13 318 270 116 38 chr2 131819868 131819924 -118867930 - LTR33A LTR ERVL -2 521 471 2319 61 0 10 chr2 131819924 131820221 -118867633 + AluY SINE Alu 1 294 -17 318 270 116 38 chr2 131820221 131820431 -118867423 - LTR33A LTR ERVL -52 471 234 455 204 244 9 chr2 131820438 131820659 -118867195 - LTR50 LTR ERVL -517 278 6 370 235 39 20 chr2 131820981 131821083 -118866771 - LTR67 LTR ERVL 0 557 454 1672 142 4 0 chr2 131821441 131821701 -118866153 + AluSx SINE Alu 35 295 -17 323 224 209 66 chr2 131821701 131821761 -118866093 + L1M4 LINE L1 2302 2352 -3794 2166 73 0 11 chr2 131821761 131822070 -118865784 + AluY SINE Alu 1 306 0 323 224 209 66 chr2 131822070 131822204 -118865650 + L1M4 LINE L1 2352 2525 -3621 1219 114 5 16 chr2 131822513 131822689 -118865165 - AluSg/x SINE Alu -2 308 133 2075 71 0 75 chr2 131822689 131823011 -118864843 - AluY SINE Alu -13 298 1 1219 114 5 16 chr2 131823011 131823027 -118864827 - AluSg/x SINE Alu -177 133 118 1302 197 100 17 chr2 131823192 131823492 -118864362 - MLT1B LTR MaLR 0 390 66 672 278 134 0 chr2 131823492 131823769 -118864085 - L1ME3A LINE L1 -262 5908 5595 512 261 112 67 chr2 131823777 131824091 -118863763 + MLT1H LTR MaLR 1 328 -221 1736 191 57 61 chr2 131824092 131824516 -118863338 - MLT1D LTR MaLR 0 505 84 655 267 53 42 chr2 131824547 131824925 -118862929 - L1MEd LINE L1 -3049 3080 2699 1350 32 0 0 chr2 131824939 131825096 -118862758 - SVA Other Other 0 1386 1230 305 313 97 6 chr2 131825096 131825447 -118862407 - L1MEd LINE L1 -3418 2711 2329 1938 132 10 0 chr2 131825472 131825768 -118862086 - AluSx SINE Alu -13 299 1 666 301 109 41 chr2 131825939 131826313 -118861541 - L1MEd LINE L1 -4122 2188 1758 1981 101 3 14 chr2 131826313 131826609 -118861245 - AluSp SINE Alu -20 293 1 666 301 109 41 chr2 131826609 131826823 -118861031 - L1MEd LINE L1 -4552 1758 1560 229 180 33 16 chr2 131826830 131826891 -118860963 - L1MEd LINE L1 -4639 1490 1429 1165 88 35 0 chr2 131826912 131827082 -118860772 - AluSg/x SINE Alu -5 305 130 1718 54 0 9 chr2 131827086 131827307 -118860547 - AluY SINE Alu -14 297 79 783 269 68 64 chr2 131827351 131828069 -118859785 - L1MEd LINE L1 -4862 1257 637 310 330 156 12 chr2 131830685 131830858 -118856996 + MIR SINE MIR 59 256 -6 284 136 0 0 chr2 131832602 131832646 -118855208 - MIR SINE MIR -79 129 86 2231 83 10 22 chr2 131832685 131832997 -118854857 + AluSp SINE Alu 1 308 -5 336 250 115 19 chr2 131833437 131833541 -118854313 - MIR SINE MIR -129 133 20 608 215 15 18 chr2 131833613 131833758 -118854096 + (CAT)n Simple_repeat Simple_repeat 1 145 -531 2159 176 10 30 chr2 131833758 131834162 -118853692 - MSTD LTR MaLR 0 396 1 608 215 15 18 chr2 131834162 131834292 -118853562 + (CAT)n Simple_repeat Simple_repeat 145 676 0 770 189 6 0 chr2 131834306 131834481 -118853373 + (CAT)n Simple_repeat Simple_repeat 3 178 0 2490 141 44 7 chr2 131834634 131835045 -118852809 - MSTB LTR MaLR 0 426 1 9415 108 30 16 chr2 131835253 131835374 -118852480 - Tigger1 DNA MER2_type 0 2418 2300 3570 34 0 2 chr2 131835374 131835791 -118852063 + L1PA5 LINE L1 5737 6152 -2 9415 108 30 16 chr2 131835791 131837059 -118850795 - Tigger1 DNA MER2_type -118 2300 1009 1066 185 5 19 chr2 131837059 131837311 -118850543 - AluJb SINE Alu 0 312 85 553 92 0 0 chr2 131837313 131837389 -118850465 - Tigger1 DNA MER2_type -1405 1013 938 328 201 93 58 chr2 131837433 131837572 -118850282 + L2 LINE L2 3115 3258 -55 21 36 0 0 chr2 131838069 131838097 -118849757 + AT_rich Low_complexity Low_complexity 1 28 0 1557 124 0 0 chr2 131838827 131839052 -118848802 + AluSc SINE Alu 1 225 -84 438 288 128 0 chr2 131840886 131841129 -118846725 - L1ME4a LINE L1 -197 5924 5651 329 329 0 0 chr2 131842406 131842488 -118845366 + L2 LINE L2 3191 3272 0 2277 198 56 19 chr2 131842686 131843172 -118844682 + LTR22 LTR ERVK 1 504 -5 259 272 98 0 chr2 131843690 131843782 -118844072 + MLT1J1-int LTR MaLR 1613 1713 -22 1076 269 95 23 chr2 131843814 131844205 -118843649 + MLT1J1 LTR MaLR 3 421 -25 215 346 107 0 chr2 131844530 131844689 -118843165 - MIR SINE MIR 0 262 87 1249 201 6 48 chr2 131845815 131846129 -118841725 + AluJo SINE Alu 1 301 -11 1508 208 10 3 chr2 131846190 131846527 -118841327 + AluJo SINE Alu 3 341 0 333 258 76 91 chr2 131846849 131847047 -118840807 + L2 LINE L2 3106 3300 -13 235 246 92 62 chr2 131847105 131847186 -118840668 - L1MEd LINE L1 -5955 164 76 1735 148 3 30 chr2 131847186 131847491 -118840363 - AluSq SINE Alu -16 297 1 235 246 92 62 chr2 131847491 131847539 -118840315 - L1MEd LINE L1 -6043 76 31 536 121 84 0 chr2 131847542 131847625 -118840229 - MER58B DNA MER1_type 0 341 252 606 279 151 9 chr2 131847792 131848011 -118839843 - MIR SINE MIR -6 256 7 1844 117 8 0 chr2 131848984 131849233 -118838621 + AluSg1 SINE Alu 1 251 -58 186 71 0 0 chr2 131849239 131849267 -118838587 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 764 196 92 18 chr2 131849291 131849454 -118838400 + MER3 DNA MER1_type 35 209 0 350 175 12 0 chr2 131849585 131849665 -118838189 + (TA)n Simple_repeat Simple_repeat 2 82 0 5619 86 49 9 chr2 131849755 131850567 -118837287 + L1PA8A LINE L1 5287 6131 0 565 247 16 42 chr2 131850760 131850950 -118836904 + MER31-int LTR ERV1 3548 3732 -2866 189 0 0 0 chr2 131851002 131851023 -118836831 + (TG)n Simple_repeat Simple_repeat 2 22 0 542 284 37 47 chr2 131851075 131851556 -118836298 + MER31-int LTR ERV1 2468 4545 -335 761 220 48 14 chr2 131851570 131851779 -118836075 + MER65C LTR ERV1 242 457 -4 22 35 0 0 chr2 131852686 131852715 -118835139 + AT_rich Low_complexity Low_complexity 1 29 0 212 308 39 0 chr2 131855698 131855776 -118832078 + MIR SINE MIR 108 188 -74 2253 142 3 19 chr2 131856046 131856413 -118831441 - MER46B DNA MER2_type 0 236 1 1534 287 85 38 chr2 131857616 131858626 -118829228 + L2 LINE L2 2256 3313 0 261 343 22 36 chr2 131858687 131858824 -118829030 - L2 LINE L2 -1 3312 3178 331 351 69 16 chr2 131858979 131859167 -118828687 - MIR SINE MIR -2 260 63 194 320 26 26 chr2 131859275 131859353 -118828501 - MIR SINE MIR -184 78 1 588 263 104 52 chr2 131859387 131859715 -118828139 + L1M4 LINE L1 2833 3142 -3004 2304 114 3 16 chr2 131859715 131860032 -118827822 + AluSp SINE Alu 1 313 0 588 263 104 52 chr2 131860032 131860452 -118827402 + L1M4 LINE L1 3142 3620 -2526 314 283 0 11 chr2 131860458 131860550 -118827304 + L1M4 LINE L1 3747 3837 -2309 700 291 51 45 chr2 131860552 131860638 -118827216 + L1M4 LINE L1 4055 4139 -2007 1927 91 4 0 chr2 131860638 131860879 -118826975 + AluY SINE Alu 1 242 -69 700 291 51 45 chr2 131860879 131861259 -118826595 + L1M4 LINE L1 4139 4524 -1622 229 292 67 11 chr2 131861881 131861970 -118825884 + MER5A DNA MER1_type 1 94 -95 270 190 290 10 chr2 131862245 131862345 -118825509 - MER97c DNA MER1_type? -917 173 46 585 75 0 0 chr2 131864764 131864844 -118823010 + L1PA6 LINE L1 6075 6154 0 2138 81 3 11 chr2 131865489 131865801 -118822053 - AluY SINE Alu 0 310 1 1133 53 0 0 chr2 131865809 131865941 -118821913 - AluY SINE Alu -179 132 1 23 0 0 0 chr2 131867059 131867082 -118820772 + AT_rich Low_complexity Low_complexity 1 23 0 205 230 40 14 chr2 131869081 131869155 -118818699 + (CTA)n Simple_repeat Simple_repeat 2 77 0 917 154 55 16 chr2 131870139 131870321 -118817533 + MER5A DNA MER1_type 1 189 0 222 246 97 45 chr2 131870802 131870936 -118816918 - L2 LINE L2 -337 2976 2836 281 212 101 21 chr2 131871057 131871203 -118816651 - MIR SINE MIR -65 143 35 883 110 24 8 chr2 131871221 131871348 -118816506 - AluSq/x SINE Alu -182 131 3 721 247 120 27 chr2 131871360 131871621 -118816233 - L1MC2 LINE L1 0 7776 6189 391 200 33 50 chr2 131872277 131872397 -118815457 + L1MC5 LINE L1 7697 7814 -147 * 560 253 14 14 chr2 131872366 131872512 -118815342 + L1MB3 LINE L1 4475 4620 -1526 2207 113 0 0 chr2 131873056 131873340 -118814514 + AluSx SINE Alu 1 284 -28 240 59 0 0 chr2 131873340 131873374 -118814480 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 1917 148 0 0 chr2 131874076 131874359 -118813495 + AluSx SINE Alu 1 283 -29 541 240 132 85 chr2 131874816 131875286 -118812568 + L2 LINE L2 2355 2846 -468 2471 78 0 0 chr2 131875906 131876201 -118811653 - AluSx SINE Alu -17 295 1 443 317 98 18 chr2 131876329 131876657 -118811197 + L1MB3 LINE L1 5456 5809 -1999 2055 75 4 0 chr2 131877719 131877984 -118809870 + AluSg SINE Alu 45 310 0 2356 105 3 3 chr2 131932047 131932353 -118755501 - AluSg SINE Alu -4 306 1 1531 158 35 3 chr2 131932604 131932888 -118754966 + L1MB3 LINE L1 5891 6183 0 305 132 38 0 chr2 131934199 131934252 -118753602 - MLT2A2 LTR ERVL 0 453 399 208 98 49 0 chr2 131934257 131934298 -118753556 + (TA)n Simple_repeat Simple_repeat 2 44 0 1841 222 63 53 chr2 131934298 131934829 -118753025 - MLT2B3 LTR ERVL -40 500 6 1100 127 6 0 chr2 131936290 131936447 -118751407 + AluSc SINE Alu 135 292 -17 1066 135 0 112 chr2 131936519 131936734 -118751120 + AluJo SINE Alu 1 191 -121 212 259 78 52 chr2 131937826 131937942 -118749912 - MIR3 SINE MIR -21 187 69 1773 138 0 8 chr2 131938084 131938337 -118749517 - AluSc SINE Alu -58 251 1 310 329 85 6 chr2 131938392 131938556 -118749298 - MIR SINE MIR -84 178 2 254 210 0 65 chr2 131938860 131938922 -118748932 + MER81 DNA DNA 1 58 -56 821 138 15 0 chr2 131938946 131939076 -118748778 - AluSg/x SINE Alu -2 308 177 1533 199 64 51 chr2 131939713 131940104 -118747750 - MSTD LTR MaLR 0 396 1 333 277 0 64 chr2 131940545 131940686 -118747168 + MIR SINE MIR 86 217 -45 2471 151 69 129 chr2 131941756 131942282 -118745572 - L1MA10 LINE L1 0 6334 5778 270 0 0 0 chr2 131942282 131942312 -118745542 + (TG)n Simple_repeat Simple_repeat 1 30 0 2471 151 69 129 chr2 131942312 131942399 -118745455 - L1MA10 LINE L1 -556 5778 5687 356 39 0 20 chr2 131942399 131942450 -118745404 + (TA)n Simple_repeat Simple_repeat 2 51 0 2471 151 69 129 chr2 131942450 131942649 -118745205 - L1MA10 LINE L1 -647 5687 5570 326 268 98 0 chr2 131942867 131942990 -118744864 + MIR SINE MIR 112 246 -16 1936 126 11 0 chr2 131943619 131943931 -118743923 + AluSx SINE Alu 1 315 0 2698 271 181 27 chr2 131945172 131946612 -118741242 + L1MEc LINE L1 40 1700 -4696 229 375 0 10 chr2 131947602 131947698 -118740156 - MIR SINE MIR -76 132 38 1380 191 10 33 chr2 131947878 131948177 -118739677 - L1MB7 LINE L1 -16 6168 5877 3211 116 64 4 chr2 131948180 131948730 -118739124 - L1PBa LINE L1 -4239 2624 2042 277 309 59 53 chr2 131949268 131949420 -118738434 + MIR SINE MIR 77 229 -33 347 269 19 19 chr2 131949441 131949545 -118738309 + LTR33 LTR ERVL 114 217 -304 1781 96 17 4 chr2 131949591 131949830 -118738024 - AluSp SINE Alu -71 242 1 348 254 35 0 chr2 131949838 131949952 -118737902 + LTR33 LTR ERVL 399 516 -5 204 297 47 16 chr2 131950862 131950926 -118736928 + MIR SINE MIR 111 176 -86 2633 175 30 96 chr2 131952445 131953320 -118734534 + L1 LINE L1 4506 5322 -824 2093 117 23 0 chr2 131954897 131955196 -118732658 - AluY SINE Alu -5 306 1 1330 259 60 19 chr2 131955586 131956069 -118731785 - L1ME3A LINE L1 -12 6158 5656 2321 88 17 0 chr2 131956236 131956533 -118731321 + AluSp SINE Alu 1 302 -11 358 275 171 61 chr2 131956547 131956893 -118730961 - L1M2 LINE L1 -5635 1214 831 633 295 157 5 chr2 131959585 131959955 -118727899 - MLT1J LTR MaLR -85 426 1 2894 142 26 10 chr2 131962113 131962612 -118725242 - MER1A DNA MER1_type -5 524 18 4288 198 36 6 chr2 131962832 131964460 -118723394 + L1PA15 LINE L1 4109 5791 -363 180 222 0 37 chr2 131964460 131964541 -118723313 + (TA)n Simple_repeat Simple_repeat 1 78 0 1577 157 39 33 chr2 131964567 131964904 -118722950 - THE1C LTR MaLR -32 343 5 2050 131 0 10 chr2 131965812 131966110 -118721744 + AluSx SINE Alu 1 295 -17 363 308 138 50 chr2 131966372 131966632 -118721222 - L2 LINE L2 0 3313 3031 2525 306 86 23 chr2 131966989 131967804 -118720050 - L2 LINE L2 -273 3040 2126 2253 114 3 0 chr2 131967804 131968112 -118719742 + AluSx SINE Alu 1 309 -3 2525 306 86 23 chr2 131968112 131968486 -118719368 - L2 LINE L2 -1187 2126 1777 461 214 10 10 chr2 131969071 131969169 -118718685 + MER58A DNA MER1_type 1 98 -9 943 182 13 0 chr2 131969184 131969338 -118718516 + AluJb SINE Alu 134 289 -23 402 167 0 0 chr2 131969345 131969411 -118718443 + MER58A DNA MER1_type 159 224 0 356 312 120 62 chr2 131969742 131970014 -118717840 - L1PA15 LINE L1 -1983 5825 5519 1883 162 15 0 chr2 131970014 131970341 -118717513 + L1PA15 LINE L1 5821 6152 -13 356 312 120 62 chr2 131970341 131970485 -118717369 - L1MC4a LINE L1 -2289 5519 5385 192 360 9 45 chr2 131970751 131970862 -118716992 - MIR3 SINE MIR -12 196 90 33 80 0 0 chr2 131971269 131971344 -118716510 + AT_rich Low_complexity Low_complexity 1 75 0 2337 84 3 0 chr2 131972403 131972702 -118715152 - AluY SINE Alu -11 300 1 478 222 109 49 chr2 131973380 131973646 -118714208 - AluYa5 SINE Alu -19 282 1 767 221 50 50 chr2 131975715 131975914 -118711940 + MER58A DNA MER1_type 23 221 -3 198 316 53 0 chr2 131975919 131975995 -118711859 + L2 LINE L2 2677 2756 -558 558 285 189 11 chr2 131975999 131976375 -118711479 + MLT1L LTR MaLR 5 447 -168 22 0 0 0 chr2 131977329 131977351 -118710503 + AT_rich Low_complexity Low_complexity 1 22 0 212 256 0 0 chr2 131977381 131977420 -118710434 + MER91 DNA MER1_type 91 129 -61 3147 165 8 8 chr2 131977650 131978177 -118709677 + MER1A DNA MER1_type 1 527 0 222 341 105 0 chr2 131978559 131978680 -118709174 + MIR SINE MIR 57 146 -62 719 108 81 0 chr2 131979450 131979587 -118708267 + AluSg/x SINE Alu 166 311 0 22 0 0 0 chr2 131979687 131979709 -118708145 + AT_rich Low_complexity Low_complexity 1 22 0 2034 101 49 3 chr2 131979796 131980084 -118707770 - AluY SINE Alu -10 301 1 401 289 138 50 chr2 131980141 131980401 -118707453 - L2 LINE L2 0 3313 3031 2282 302 132 17 chr2 131980679 131981430 -118706424 - L2 LINE L2 -269 3044 2105 2185 130 0 0 chr2 131981430 131981731 -118706123 + AluSx SINE Alu 1 301 -11 2282 302 132 17 chr2 131981731 131982103 -118705751 - L2 LINE L2 -1208 2105 1777 25 65 0 0 chr2 131982208 131982254 -118705600 + AT_rich Low_complexity Low_complexity 1 46 0 27 49 0 0 chr2 131982532 131982573 -118705281 + AT_rich Low_complexity Low_complexity 1 41 0 490 155 31 21 chr2 131982705 131982802 -118705052 + MER58A DNA MER1_type 1 98 -9 962 200 0 0 chr2 131982815 131982975 -118704879 + AluJb SINE Alu 132 291 -21 407 154 0 0 chr2 131982983 131983048 -118704806 + MER58A DNA MER1_type 160 224 0 337 284 208 52 chr2 131983468 131983670 -118704184 - L1MC/D LINE L1 -2046 5762 5593 1793 179 9 14 chr2 131983670 131984017 -118703837 + L1PA15 LINE L1 5821 6165 0 337 284 208 52 chr2 131984017 131984141 -118703713 - L1MC/D LINE L1 -2215 5593 5385 198 328 8 66 chr2 131985069 131985191 -118702663 - MIR3 SINE MIR -4 204 90 42 65 0 0 chr2 131985605 131985682 -118702172 + AT_rich Low_complexity Low_complexity 1 77 0 28 48 0 0 chr2 131986606 131986648 -118701206 + AT_rich Low_complexity Low_complexity 1 42 0 29 60 0 0 chr2 131986718 131986768 -118701086 + AT_rich Low_complexity Low_complexity 1 50 0 23 33 0 0 chr2 131986844 131986874 -118700980 + AT_rich Low_complexity Low_complexity 1 30 0 1188 203 137 53 chr2 131987256 131987748 -118700106 + LTR61 LTR ERV1 1 595 0 2039 146 7 7 chr2 131987860 131988169 -118699685 - AluSc SINE Alu 0 309 1 845 220 47 47 chr2 131990266 131990480 -118697374 + MER58A DNA MER1_type 8 221 -3 216 275 58 0 chr2 131990485 131990554 -118697300 + L2 LINE L2 2677 2749 -565 559 297 180 10 chr2 131990560 131990944 -118696910 + MLT1L LTR MaLR 1 449 -166 320 173 0 0 chr2 131991941 131991993 -118695861 + MER91B DNA MER1_type 79 130 -60 3184 165 9 8 chr2 131992222 131992748 -118695106 + MER1A DNA MER1_type 1 527 0 296 371 53 0 chr2 131993130 131993281 -118694573 + MIR SINE MIR 57 215 -47 559 189 9 9 chr2 131993974 131994080 -118693774 - U6 snRNA snRNA -1 106 1 359 319 90 12 chr2 131995901 131996114 -118691740 - MIR SINE MIR -28 234 7 255 282 90 13 chr2 131997165 131997243 -118690611 + L2 LINE L2 3139 3222 -50 21 57 0 0 chr2 131997375 131997410 -118690444 + AT_rich Low_complexity Low_complexity 1 35 0 1263 168 172 16 chr2 131997867 131998123 -118689731 + AluJb SINE Alu 1 296 -6 763 155 0 0 chr2 131998280 131998431 -118689423 - FLAM_A SINE Alu 0 151 1 622 284 102 50 chr2 132000278 132000527 -118687327 + MIR SINE MIR 3 259 -3 357 274 71 18 chr2 132000624 132000792 -118687062 + MER104 DNA MER2_type 3 179 -1 2526 132 13 10 chr2 132001110 132001505 -118686349 - L1PA12 LINE L1 0 6168 5773 312 316 98 42 chr2 132002079 132002294 -118685560 + L1ME4a LINE L1 5682 5908 -213 2528 130 13 5 chr2 132003102 132003495 -118684359 + L1PA12 LINE L1 5773 6168 0 349 286 71 18 chr2 132003813 132003981 -118683873 - MER104 DNA MER2_type -1 179 3 614 296 83 39 chr2 132004078 132004308 -118683546 - MIR SINE MIR -3 259 20 785 155 0 0 chr2 132006176 132006333 -118681521 + FLAM_A SINE Alu 1 157 0 813 142 0 8 chr2 132006490 132006610 -118681244 - AluJb SINE Alu -12 300 182 272 48 24 0 chr2 132006610 132006652 -118681202 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 757 176 0 8 chr2 132006655 132006774 -118681080 - FLAM_C SINE Alu -24 119 2 21 57 0 0 chr2 132007212 132007247 -118680607 + AT_rich Low_complexity Low_complexity 1 35 0 247 282 90 13 chr2 132007379 132007457 -118680397 - L2 LINE L2 -50 3222 3139 354 296 100 17 chr2 132008506 132008718 -118679136 + MIR SINE MIR 7 234 -28 605 189 9 9 chr2 132010545 132010651 -118677203 + U6 snRNA snRNA 1 106 -1 2596 180 53 0 chr2 132011522 132012049 -118675805 - L1MB3 LINE L1 -50 6133 5579 1603 152 34 67 chr2 132012092 132012357 -118675497 - L1MB3 LINE L1 -568 5612 5351 2404 96 0 10 chr2 132012357 132012671 -118675183 + AluSq SINE Alu 1 311 -2 1603 152 34 67 chr2 132012671 132012793 -118675061 - L1MB3 LINE L1 -829 5351 5227 717 162 20 167 chr2 132012949 132013147 -118674707 + AluSp SINE Alu 132 300 -13 2169 138 0 0 chr2 132013148 132013460 -118674394 + AluSx SINE Alu 1 312 0 1329 221 116 78 chr2 132013526 132014154 -118673700 + MLT1E1 LTR MaLR 1 652 -2 525 272 7 0 chr2 132014157 132014293 -118673561 + MLT1E1-int LTR MaLR 2 138 -1233 2346 184 85 112 chr2 132014485 132015228 -118672626 - LTR8A LTR ERV1 -4 723 1 923 188 6 0 chr2 132015230 132015400 -118672454 + MLT1E1-int LTR MaLR 436 606 -765 647 299 58 75 chr2 132015565 132016154 -118671700 + MLT1E1-int LTR MaLR 696 1274 -97 4321 106 28 27 chr2 132016217 132016313 -118671541 + MER41B LTR ERV1 1 95 -540 2474 73 0 16 chr2 132016313 132016627 -118671227 - AluY SINE Alu -2 309 1 2351 84 0 3 chr2 132016627 132016925 -118670929 - AluSx SINE Alu -15 297 1 4321 106 28 27 chr2 132016925 132017461 -118670393 + MER41B LTR ERV1 94 635 0 289 236 154 9 chr2 132017548 132017658 -118670196 + MLT1E1 LTR MaLR 1 126 -528 1796 147 53 10 chr2 132019412 132019711 -118668143 + AluJb SINE Alu 1 312 0 1941 153 3 3 chr2 132019718 132020019 -118667835 + AluJb SINE Alu 1 301 -11 2244 83 0 47 chr2 132022074 132022205 -118665649 + AluSc SINE Alu 4 140 -169 180 0 0 0 chr2 132022205 132022225 -118665629 + (TA)n Simple_repeat Simple_repeat 2 21 0 423 0 0 0 chr2 132022230 132022277 -118665577 + (CA)n Simple_repeat Simple_repeat 2 48 0 2244 83 0 47 chr2 132022277 132022440 -118665414 + AluSc SINE Alu 144 290 -19 1906 106 8 0 chr2 132022840 132023096 -118664758 - AluSp SINE Alu -14 299 42 182 217 65 0 chr2 132023196 132023242 -118664612 + MIR3 SINE MIR 13 61 -147 2544 88 0 0 chr2 132024259 132024567 -118663287 + AluSx SINE Alu 5 312 0 1496 283 137 14 chr2 132024584 132025461 -118662393 - L1ME3A LINE L1 -11 6159 5181 208 128 51 0 chr2 132025463 132025502 -118662352 - MIR SINE MIR -79 129 89 2103 128 30 3 chr2 132025593 132025889 -118661965 - AluSx SINE Alu -8 304 1 205 214 0 54 chr2 132025889 132025934 -118661920 + CT-rich Low_complexity Low_complexity 13 56 0 442 198 33 11 chr2 132026924 132027015 -118660839 + FLAM_C SINE Alu 26 118 -25 22 35 0 0 chr2 132027015 132027044 -118660810 + AT_rich Low_complexity Low_complexity 1 29 0 2574 50 7 0 chr2 132027054 132027354 -118660500 + AluY SINE Alu 1 302 -9 389 282 24 5 chr2 132029624 132029764 -118658090 - MIR SINE MIR -27 181 40 369 291 106 26 chr2 132030717 132030944 -118656910 + L1ME LINE L1 716 960 -5110 2443 79 0 0 chr2 132031395 132031687 -118656167 + AluY SINE Alu 1 292 -19 556 142 121 85 chr2 132031896 132032037 -118655817 - MLT2D LTR ERVL -7 407 262 1534 146 0 21 chr2 132032037 132032277 -118655577 + AluJo SINE Alu 55 289 -23 25 31 0 0 chr2 132032458 132032490 -118655364 + AT_rich Low_complexity Low_complexity 1 32 0 708 177 26 130 chr2 132032525 132032592 -118655262 - MLT1A1 LTR MaLR 0 365 293 2454 87 0 0 chr2 132032592 132032902 -118654952 + AluSg SINE Alu 1 310 0 708 177 26 130 chr2 132032902 132033082 -118654772 - MLT1A1 LTR MaLR -72 293 152 2170 109 10 22 chr2 132033161 132033337 -118654517 - AluSg SINE Alu -2 308 136 2644 33 0 10 chr2 132033337 132033641 -118654213 - AluY SINE Alu -10 301 1 2170 109 10 22 chr2 132033641 132033776 -118654078 - AluSg SINE Alu -174 136 1 1950 150 3 13 chr2 132033783 132034089 -118653765 - AluJb SINE Alu -9 303 1 42 0 0 0 chr2 132034676 132034718 -118653136 + AT_rich Low_complexity Low_complexity 1 42 0 761 142 18 77 chr2 132034718 132034887 -118652967 - FRAM SINE Alu -25 151 1 2381 67 3 13 chr2 132035250 132035573 -118652281 - AluY SINE Alu 0 320 1 2200 89 0 40 chr2 132035575 132035879 -118651975 - AluSg SINE Alu -18 292 1 581 196 131 24 chr2 132036239 132036407 -118651447 - MER74A LTR ERVL 0 558 373 * 921 237 78 10 chr2 132036405 132036700 -118651154 + MER74A LTR ERVL 243 557 -1 * 957 206 213 48 chr2 132036700 132037068 -118650786 - MER63D DNA MER1_type -536 525 68 2426 79 0 16 chr2 132037068 132037384 -118650470 + AluY SINE Alu 1 311 0 957 206 213 48 chr2 132037384 132037461 -118650393 - MER63D DNA MER1_type -993 68 5 2311 44 10 41 chr2 132038957 132039252 -118648602 - AluY SINE Alu -25 286 1 1915 154 30 7 chr2 132042286 132042584 -118645270 - AluJo SINE Alu -7 305 1 2363 70 0 26 chr2 132042622 132042924 -118644930 + AluY SINE Alu 1 294 -17 362 248 114 19 chr2 132042979 132043084 -118644770 + MIR SINE MIR 104 218 -44 240 284 35 14 chr2 132044811 132044952 -118642902 + (CCCG)n Simple_repeat Simple_repeat 2 145 0 * 326 273 0 43 chr2 132044866 132045053 -118642801 + C-rich Low_complexity Low_complexity 1 179 0 21 0 0 0 chr2 132045179 132045200 -118642654 + GC_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr2 132046221 132046260 -118641594 + AT_rich Low_complexity Low_complexity 1 39 0 289 299 0 0 chr2 132047139 132047216 -118640638 - MIR SINE MIR -90 172 96 1765 154 7 10 chr2 132047796 132048089 -118639765 - AluJo SINE Alu -18 294 3 2487 55 0 3 chr2 132048101 132048394 -118639460 - AluY SINE Alu -19 292 1 360 249 113 72 chr2 132048677 132048898 -118638956 - L1MC5 LINE L1 -32 7929 7700 792 256 29 4 chr2 132049523 132049761 -118638093 - L1MB5 LINE L1 -207 5967 5724 684 265 0 6 chr2 132049761 132049942 -118637912 + MLT1B LTR MaLR 211 390 0 2255 98 3 19 chr2 132050493 132050800 -118637054 + AluSc SINE Alu 1 302 -7 916 103 0 0 chr2 132050800 132050924 -118636930 + AluSg/x SINE Alu 185 302 -7 2390 84 0 0 chr2 132052393 132052704 -118635150 + AluY SINE Alu 1 311 0 2024 107 4 0 chr2 132052780 132053060 -118634794 + AluSq SINE Alu 1 281 -32 226 44 22 44 chr2 132053061 132053106 -118634748 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 2169 189 27 18 chr2 132053348 132053788 -118634066 + L1PB4 LINE L1 5713 6156 0 1903 183 85 13 chr2 132054309 132054707 -118633147 + MSTC LTR MaLR 2 428 0 2290 176 80 0 chr2 132055192 132055641 -118632213 - MER31A LTR ERV1 0 485 1 401 259 129 20 chr2 132055703 132055904 -118631950 - L2 LINE L2 0 3313 3091 468 311 284 6 chr2 132056172 132056995 -118630859 - L2 LINE L2 -791 2523 1930 2209 78 3 0 chr2 132056995 132057326 -118630528 - AluSp SINE Alu 0 332 1 468 311 284 6 chr2 132057326 132057465 -118630389 - L2 LINE L2 -1384 1930 1292 236 164 55 14 chr2 132058281 132058354 -118629500 + (GCTTG)n Simple_repeat Simple_repeat 5 80 0 2289 57 23 10 chr2 132059771 132060071 -118627783 + AluY SINE Alu 1 304 -7 233 233 0 0 chr2 132060512 132060602 -118627252 - L1MC4 LINE L1 -1339 6703 6614 353 336 39 0 chr2 132060603 132060668 -118627186 - L1MC4 LINE L1 -1344 6698 6626 1985 108 7 7 chr2 132060668 132060955 -118626899 - AluSg1 SINE Alu -20 289 3 353 336 39 0 chr2 132060955 132060993 -118626861 - L1MC4 LINE L1 -1416 6626 6591 442 332 148 44 chr2 132061616 132062046 -118625808 - L1ME4a LINE L1 -169 5952 5568 2176 127 0 3 chr2 132062046 132062354 -118625500 - AluSg SINE Alu -3 307 1 442 332 148 44 chr2 132062354 132062529 -118625325 - L1ME4a LINE L1 -553 5568 5274 1999 108 3 7 chr2 132062529 132062817 -118625037 + AluSg1 SINE Alu 1 287 -22 310 336 115 59 chr2 132062919 132063278 -118624576 - L1ME4a LINE L1 -1195 4951 4613 2124 78 27 10 chr2 132063278 132063572 -118624282 - AluY SINE Alu -12 299 1 310 336 115 59 chr2 132063572 132063936 -118623918 - L1ME4a LINE L1 -1533 4613 4188 196 27 54 27 chr2 132065005 132065042 -118622812 + (CAAGC)n Simple_repeat Simple_repeat 4 41 0 713 143 8 0 chr2 132065731 132065850 -118622004 + L1PB1 LINE L1 6029 6148 -3 1642 216 67 52 chr2 132065890 132066491 -118621363 - L1MB8 LINE L1 0 6178 5569 * 1644 196 71 61 chr2 132066475 132067117 -118620737 - L1MB8 LINE L1 -1337 4809 4132 2115 173 72 6 chr2 132068027 132068502 -118619352 - MER41-int LTR ERV1 -2716 3230 2725 814 161 47 24 chr2 132068505 132068716 -118619138 - MER41-int LTR ERV1 -6070 2050 1835 * 1473 164 22 15 chr2 132068711 132068985 -118618869 - MER41-int LTR ERV1 -3592 2354 2079 196 324 54 0 chr2 132068991 132069065 -118618789 - MIR SINE MIR -108 154 77 1690 134 0 0 chr2 132069774 132070027 -118617827 + AluSq SINE Alu 45 297 -16 2194 119 3 0 chr2 132070128 132070440 -118617414 + AluSp SINE Alu 1 313 0 1019 94 7 0 chr2 132070628 132070766 -118617088 + MER85 DNA T2_type 1 139 0 311 242 17 25 chr2 132070921 132071041 -118616813 + GA-rich Low_complexity Low_complexity 2 120 0 2293 87 0 13 chr2 132071146 132071458 -118616396 + AluY SINE Alu 1 308 -3 743 240 68 79 chr2 132072532 132073222 -118614632 - HSREP522 Satellite telomeric 0 682 1 6747 195 50 52 chr2 132073615 132075036 -118612818 - L1 LINE L1 -1913 5652 4233 2087 72 7 0 chr2 132075036 132075339 -118612515 - AluY SINE Alu 0 305 1 6747 195 50 52 chr2 132075339 132076265 -118611589 - L1 LINE L1 -3332 4233 3306 555 153 0 0 chr2 132076266 132076351 -118611503 + AluSc SINE Alu 161 245 -64 432 51 0 0 chr2 132076513 132076572 -118611282 + (TC)n Simple_repeat Simple_repeat 1 59 0 22 0 0 0 chr2 132076663 132076685 -118611169 + AT_rich Low_complexity Low_complexity 1 22 0 2305 70 0 13 chr2 132076685 132076987 -118610867 + AluY SINE Alu 1 298 -13 206 255 124 7 chr2 132082816 132082960 -118604894 + MIR SINE MIR 61 225 -37 225 286 0 0 chr2 132085362 132085418 -118602436 + G-rich Low_complexity Low_complexity 1 56 0 2489 59 0 0 chr2 132085585 132085892 -118601962 - AluY SINE Alu -2 309 3 1907 94 18 0 chr2 132086619 132086938 -118600916 + AluSx SINE Alu 1 324 0 205 118 78 0 chr2 132086982 132087005 -118600849 + A-rich Low_complexity Low_complexity 6 26 -34 1340 173 30 94 chr2 132087005 132087335 -118600519 + AluJo SINE Alu 3 311 -1 205 118 78 0 chr2 132087335 132087362 -118600492 + A-rich Low_complexity Low_complexity 26 60 0 417 301 15 8 chr2 132087368 132087501 -118600353 + L1MCa LINE L1 628 761 -5803 * 1962 192 49 47 chr2 132087488 132087989 -118599865 + L1MCa LINE L1 650 1148 -4931 2072 141 3 3 chr2 132087989 132088301 -118599553 + AluSx SINE Alu 1 312 0 1962 192 49 47 chr2 132088301 132088317 -118599537 + L1MCa LINE L1 1148 1162 -4917 1868 160 0 3 chr2 132088317 132088453 -118599401 + AluSx SINE Alu 1 136 -176 2116 68 4 0 chr2 132088453 132088719 -118599135 + AluY SINE Alu 39 305 -6 1868 160 0 3 chr2 132088719 132088882 -118598972 + AluSx SINE Alu 136 299 -13 337 173 162 5 chr2 132088882 132088917 -118598937 + L1MCa LINE L1 1948 1976 -4588 1962 192 49 47 chr2 132088882 132088915 -118598939 + L1MCa LINE L1 1162 1215 -4864 1371 183 133 0 chr2 132088917 132089180 -118598674 + AluJb SINE Alu 4 301 -1 337 173 162 5 chr2 132089180 132089329 -118598525 + L1MCa LINE L1 1976 2161 -4403 1448 155 44 4 chr2 132089390 132089641 -118598213 - AluJo SINE Alu -49 263 3 1325 224 15 51 chr2 132089641 132089976 -118597878 - L1M4c LINE L1 -5814 570 248 604 218 0 0 chr2 132089977 132090101 -118597753 - MLT2B1 LTR ERVL -396 124 1 475 80 0 0 chr2 132090101 132090176 -118597678 - ERVL-B1 LTR ERVL -7 5757 5683 1875 220 133 27 chr2 132090219 132090770 -118597084 - MER50 LTR ERV1 0 734 126 1994 137 13 0 chr2 132090776 132091076 -118596778 - AluSx SINE Alu -8 304 1 1666 150 7 7 chr2 132091223 132091503 -118596351 + AluJo SINE Alu 7 286 -26 888 216 17 6 chr2 132092496 132092677 -118595177 - AluJb SINE Alu -22 290 108 332 261 11 0 chr2 132098244 132098332 -118589522 - MIR SINE MIR -113 149 61 1529 181 21 7 chr2 132099297 132099584 -118588270 + AluJo SINE Alu 3 293 -19 1437 117 159 0 chr2 132099756 132100013 -118587841 - AluSx SINE Alu -14 298 1 1721 138 28 10 chr2 132100437 132100727 -118587127 - AluJb SINE Alu -17 295 1 21 0 0 0 chr2 132102307 132102328 -118585526 + GC_rich Low_complexity Low_complexity 1 21 0 300 242 57 89 chr2 132103271 132103349 -118584505 - L1ME LINE L1 -439 5682 5608 2134 91 7 3 chr2 132103349 132103646 -118584208 + AluSq SINE Alu 1 298 -15 300 242 57 89 chr2 132103646 132103691 -118584163 - L1ME LINE L1 -513 5608 5563 231 200 40 40 chr2 132103847 132103922 -118583932 - L1ME LINE L1 -2410 5398 5324 21 57 0 0 chr2 132103949 132103984 -118583870 + AT_rich Low_complexity Low_complexity 1 35 0 366 302 104 54 chr2 132104129 132104483 -118583371 - L1ME LINE L1 -1526 4620 4249 343 297 108 20 chr2 132104511 132104659 -118583195 - L1ME LINE L1 -1958 4188 4028 5724 62 1 16 chr2 132104672 132105412 -118582442 + L1PA7 LINE L1 5423 6151 -3 209 281 132 33 chr2 132105504 132105625 -118582229 + L2 LINE L2 2397 2529 -785 1818 143 10 3 chr2 132105910 132106204 -118581650 + AluSx SINE Alu 13 308 -4 279 79 0 0 chr2 132106606 132106644 -118581210 + (T)n Simple_repeat Simple_repeat 1 38 0 2317 86 0 0 chr2 132106702 132107006 -118580848 - AluSc SINE Alu -4 305 2 2351 54 6 13 chr2 132107060 132107373 -118580481 - AluY SINE Alu 0 311 1 1550 145 11 25 chr2 132108171 132108453 -118579401 + AluJb SINE Alu 35 312 0 1329 258 41 68 chr2 132108894 132109378 -118578476 - MLT1G1 LTR MaLR 0 595 125 2914 230 107 82 chr2 132110226 132110488 -118577366 + Tigger6b DNA MER2_type 1 255 -1342 2395 67 0 22 chr2 132110488 132110801 -118577053 - AluSc SINE Alu -3 306 1 2914 230 107 82 chr2 132110801 132111660 -118576194 + Tigger6b DNA MER2_type 255 1174 -423 185 0 40 0 chr2 132111660 132111685 -118576169 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 2914 230 107 82 chr2 132111685 132112119 -118575735 + Tigger6b DNA MER2_type 1174 1596 -1 2314 80 3 3 chr2 132112956 132113267 -118574587 + AluSp SINE Alu 1 311 -2 21 36 0 0 chr2 132114013 132114041 -118573813 + AT_rich Low_complexity Low_complexity 1 28 0 991 153 17 28 chr2 132114291 132114468 -118573386 - FAM SINE Alu 0 175 1 2021 102 30 3 chr2 132114742 132115037 -118572817 + AluY SINE Alu 1 303 -8 2110 103 0 0 chr2 132115476 132115780 -118572074 - AluSg SINE Alu 0 304 1 827 286 164 22 chr2 132116562 132116907 -118570947 + L2 LINE L2 1281 1708 -1606 2073 200 35 7 chr2 132116907 132117358 -118570496 - MER88 LTR ERVL 0 464 1 827 286 164 22 chr2 132117358 132117470 -118570384 + L2 LINE L2 1708 1803 -1511 247 213 0 125 chr2 132117725 132117885 -118569969 + C-rich Low_complexity Low_complexity 2 141 0 208 227 0 0 chr2 132120815 132120859 -118566995 + GA-rich Low_complexity Low_complexity 2 45 0 504 266 243 15 chr2 132121472 132121739 -118566115 + L2 LINE L2 1782 2109 -1205 962 213 6 0 chr2 132121740 132121909 -118565945 - MER45A DNA AcHobo -1 177 8 2004 271 100 17 chr2 132121950 132122783 -118565071 + L2 LINE L2 2170 3049 -264 353 327 0 9 chr2 132123231 132123338 -118564516 + L2 LINE L2 3208 3313 0 1634 175 0 26 chr2 132124194 132124497 -118563357 + AluJo SINE Alu 3 297 -15 1557 97 0 0 chr2 132124574 132124781 -118563073 + AluSc SINE Alu 93 299 -10 985 238 94 7 chr2 132125314 132125612 -118562242 - MER5C DNA MER1_type 0 324 1 761 291 131 42 chr2 132125742 132125792 -118562062 - Charlie7 DNA MER1_type -1873 739 695 2218 75 0 23 chr2 132125792 132126099 -118561755 - AluY SINE Alu -11 300 1 761 291 131 42 chr2 132126099 132126521 -118561333 - Charlie7 DNA MER1_type -1917 695 191 7706 25 6 1 chr2 132126521 132127473 -118560381 + L1PA4 LINE L1 5200 6155 0 761 291 131 42 chr2 132127473 132127646 -118560208 - Charlie7 DNA MER1_type -2421 191 35 201 260 0 0 chr2 132127713 132127763 -118560091 + MER5A DNA MER1_type 56 105 -84 7588 184 51 7 chr2 132130404 132131733 -118556121 + L1PA12 LINE L1 617 2004 -5577 386 240 0 0 chr2 132131834 132131909 -118555945 - L1PA13 LINE L1 -6244 1330 1256 480 127 0 14 chr2 132131919 132131990 -118555864 - L1PA13 LINE L1 -6251 1330 1261 1205 269 108 20 chr2 132132010 132132352 -118555502 + L1PA13 LINE L1 482 853 -5934 2671 196 24 5 chr2 132132371 132132922 -118554932 + L1PA13 LINE L1 2492 3052 -3745 2406 168 161 15 chr2 132132923 132133470 -118554384 + MER4-int LTR ERV1 29 655 -5943 237 135 0 0 chr2 132133555 132133607 -118554247 + (A)n Simple_repeat Simple_repeat 1 52 0 6108 95 11 0 chr2 132133640 132134734 -118553120 - L1PA4 LINE L1 -1 6154 5051 3040 134 16 0 chr2 132134760 132135253 -118552601 + L1P LINE L1 4555 5055 -1091 435 229 10 0 chr2 132136622 132136718 -118551136 - THE1-int LTR MaLR -577 1003 907 1161 209 64 11 chr2 132136722 132137004 -118550850 + MSTA LTR MaLR 76 372 -56 612 172 164 8 chr2 132137069 132137203 -118550651 - MST-int LTR MaLR -990 661 507 1446 254 36 12 chr2 132137209 132137623 -118550231 + MSTA-int LTR MaLR 36 459 -1192 2010 98 3 13 chr2 132138271 132138577 -118549277 - AluY SINE Alu -8 303 1 867 85 15 0 chr2 132138586 132138716 -118549138 - AluY SINE Alu -179 132 1 1533 164 14 14 chr2 132139900 132140180 -118547674 + AluJo SINE Alu 11 290 -22 254 247 90 45 chr2 132140897 132140986 -118546868 + L2 LINE L2 3115 3207 -65 199 306 48 0 chr2 132142846 132142908 -118544946 + L2 LINE L2 3206 3270 -2 626 311 76 90 chr2 132144092 132144594 -118543260 - HAL1 LINE L1 -1078 1429 935 1681 149 27 7 chr2 132145324 132145620 -118542234 - AluJo SINE Alu -10 302 1 220 196 143 0 chr2 132145647 132145703 -118542151 + MIR SINE MIR 122 185 -77 480 171 0 39 chr2 132146164 132146293 -118541561 + CT-rich Low_complexity Low_complexity 1 124 0 233 252 2 20 chr2 132146296 132146356 -118541498 + polypyrimidine Low_complexity Low_complexity 5 43 0 1382 108 0 0 chr2 132146357 132146543 -118541311 - AluSx SINE Alu -93 219 34 268 135 11 157 chr2 132146543 132146594 -118541260 - L1 LINE L1 -1491 4655 4620 2066 95 3 0 chr2 132146594 132146929 -118540925 - AluSp SINE Alu 0 336 1 268 135 11 157 chr2 132146929 132146965 -118540889 - L1 LINE L1 -1526 4620 4580 366 342 65 16 chr2 132147127 132147311 -118540543 - L1MC1 LINE L1 -465 5868 5676 349 305 0 0 chr2 132148609 132148691 -118539163 + L2 LINE L2 3191 3272 0 2249 170 80 39 chr2 132148889 132149378 -118538476 + LTR22 LTR ERVK 1 509 0 238 289 31 10 chr2 132149875 132149972 -118537882 + MLT-int LTR MaLR 1615 1713 -22 1636 65 2 2 chr2 132150107 132150411 -118537443 + L1MC/D LINE L1 5193 5496 -686 2066 122 0 0 chr2 132150519 132150815 -118537039 - AluSc SINE Alu -13 296 1 409 181 21 0 chr2 132151990 132152084 -118535770 + CT-rich Low_complexity Low_complexity 2 97 0 3158 76 0 0 chr2 132152457 132152863 -118534991 - L1PA6 LINE L1 0 6154 5749 3312 165 8 8 chr2 132153113 132153640 -118534214 - MER1A DNA MER1_type 0 527 1 321 173 0 0 chr2 132153869 132153921 -118533933 - MER91B DNA MER1_type -60 130 79 1918 142 32 32 chr2 132154717 132155028 -118532826 + AluSx SINE Alu 1 311 -1 2224 101 7 3 chr2 132155804 132156102 -118531752 - AluY SINE Alu -12 299 1 2109 99 10 60 chr2 132156196 132156510 -118531344 + AluSx SINE Alu 1 298 -14 318 246 82 25 chr2 132156915 132157037 -118530817 - L1ME4a LINE L1 -251 5870 5742 430 266 45 7 chr2 132157056 132157210 -118530644 - L1ME4a LINE L1 -451 5670 5511 2266 103 3 0 chr2 132157215 132157506 -118530348 + AluSx SINE Alu 14 305 -7 23373 54 3 11 chr2 132163477 132166551 -118521303 - L1P LINE L1 -3097 3049 3 2315 96 0 0 chr2 132167078 132167370 -118520484 + AluSq SINE Alu 16 307 -6 3140 47 3 0 chr2 132168167 132168548 -118519306 - L1PA6 LINE L1 -3 6151 5770 764 209 0 0 chr2 132169962 132170134 -118517720 - L1 LINE L1 -1603 4543 4372 2289 117 0 19 chr2 132171054 132171370 -118516484 + AluSg SINE Alu 1 310 0 360 64 0 0 chr2 132171719 132171766 -118516088 + (TA)n Simple_repeat Simple_repeat 2 48 0 315 353 58 46 chr2 132172129 132172302 -118515552 - MER5A DNA MER1_type -3 186 1 437 267 99 29 chr2 132172312 132172484 -118515370 + MIR SINE MIR 20 203 -59 190 363 111 22 chr2 132172848 132173074 -118514780 + MIR SINE MIR 2 247 -15 380 20 0 20 chr2 132173138 132173188 -118514666 + (TG)n Simple_repeat Simple_repeat 2 50 0 361 129 29 0 chr2 132173474 132173544 -118514310 + CT-rich Low_complexity Low_complexity 1 72 0 192 40 0 0 chr2 132175175 132175200 -118512654 + (CACGT)n Simple_repeat Simple_repeat 4 28 0 1190 256 14 8 chr2 132176502 132176861 -118510993 + L1MB3 LINE L1 4845 5205 -941 1880 164 3 13 chr2 132176865 132177176 -118510678 + AluJo SINE Alu 4 311 -1 2237 104 3 19 chr2 132177177 132177486 -118510368 + AluSp SINE Alu 1 304 -9 1242 181 69 22 chr2 132177489 132177765 -118510089 + L1MB3 LINE L1 5735 6023 -160 611 179 7 50 chr2 132177767 132177907 -118509947 - AluJo SINE Alu -176 136 3 679 178 30 7 chr2 132177915 132178050 -118509804 + L1MB2 LINE L1 6030 6167 -4 2074 129 44 0 chr2 132178078 132178373 -118509481 + AluSx SINE Alu 1 308 -4 2312 116 0 3 chr2 132179148 132179459 -118508395 - AluSx SINE Alu -2 310 1 496 261 49 76 chr2 132179678 132179942 -118507912 + L1MC4 LINE L1 6963 7219 -823 1348 196 3 63 chr2 132179943 132180259 -118507595 + AluJo SINE Alu 1 297 -15 1324 148 0 14 chr2 132180262 132180471 -118507383 + AluJb SINE Alu 85 290 -22 965 189 133 0 chr2 132180566 132180746 -118507108 - AluJo SINE Alu -21 291 88 1935 174 3 0 chr2 132180754 132181058 -118506796 - AluSx SINE Alu -7 305 1 273 233 0 0 chr2 132181081 132181141 -118506713 + L1MC4 LINE L1 7316 7375 -667 257 233 93 0 chr2 132181257 132181343 -118506511 + L1MC4 LINE L1 7566 7659 -383 749 253 28 39 chr2 132181378 132181598 -118506256 + L1MC4 LINE L1 7761 7979 -63 1798 165 48 3 chr2 132181598 132181889 -118505965 - AluJo SINE Alu -8 304 1 749 253 28 39 chr2 132181889 132181953 -118505901 + L1MC4 LINE L1 7979 8042 0 864 228 88 48 chr2 132181957 132182229 -118505625 + AluJo SINE Alu 6 288 -24 1712 137 104 0 chr2 132182242 132182512 -118505342 + AluSx SINE Alu 1 298 -14 1642 185 11 3 chr2 132182527 132182814 -118505040 + AluJo SINE Alu 7 295 -17 2021 125 3 17 chr2 132182815 132183104 -118504750 + AluSx SINE Alu 2 286 -26 252 0 0 0 chr2 132183107 132183135 -118504719 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 1854 122 8 0 chr2 132183192 132183439 -118504415 - AluSx SINE Alu -63 249 1 298 233 0 0 chr2 132185988 132186067 -118501787 + A-rich Low_complexity Low_complexity 1 82 -8 1946 164 0 0 chr2 132186067 132186347 -118501507 - AluJb SINE Alu -24 288 9 1117 184 18 36 chr2 132186549 132186772 -118501082 - MER20 DNA MER1_type 0 219 1 732 168 56 8 chr2 132188029 132188154 -118499700 - FLAM_A SINE Alu -1 132 2 180 235 88 29 chr2 132188376 132188444 -118499410 - MIR SINE MIR -131 131 60 1562 164 46 53 chr2 132188720 132189024 -118498830 - AluJo SINE Alu -10 302 1 1757 185 0 3 chr2 132189130 132189416 -118498438 - AluJo SINE Alu -27 285 1 2126 128 10 0 chr2 132189450 132189755 -118498099 + AluSx SINE Alu 1 308 -4 249 250 16 16 chr2 132189831 132189895 -118497959 - MIR SINE MIR -21 241 178 631 164 150 14 chr2 132189895 132190035 -118497819 + MLT1E2 LTR MaLR 2 160 -464 * 1141 191 135 0 chr2 132190031 132190261 -118497593 + MLT1E2 LTR MaLR 330 590 -36 418 228 59 44 chr2 132190283 132190419 -118497435 - MIR SINE MIR -80 182 45 2153 125 13 10 chr2 132190547 132190858 -118496996 + AluSx SINE Alu 1 312 0 181 296 28 42 chr2 132190978 132191049 -118496805 + MER5A DNA MER1_type 66 135 -54 2394 71 10 13 chr2 132191146 132191456 -118496398 - AluY SINE Alu -2 309 1 1320 118 10 5 chr2 132191493 132191688 -118496166 - AluSq SINE Alu -84 229 34 2204 112 3 10 chr2 132191692 132191988 -118495866 - AluSg SINE Alu -16 294 1 2484 49 16 10 chr2 132191990 132192298 -118495556 - AluY SINE Alu -1 310 1 2262 75 0 26 chr2 132192301 132192606 -118495248 - AluSg1 SINE Alu -12 297 1 217 313 50 0 chr2 132193971 132194051 -118493803 - L2 LINE L2 -12 3260 3177 182 292 0 0 chr2 132194107 132194155 -118493699 + MIR SINE MIR 207 254 -8 579 195 62 0 chr2 132195118 132195231 -118492623 + FLAM_C SINE Alu 1 120 -13 1913 120 9 67 chr2 132196975 132197114 -118490740 + AluJo SINE Alu 7 152 -160 2565 50 0 7 chr2 132197114 132197412 -118490442 + AluY SINE Alu 1 296 -15 1913 120 9 67 chr2 132197412 132197588 -118490266 + AluJo SINE Alu 152 304 -8 1610 176 8 0 chr2 132198746 132199008 -118488846 + AluJb SINE Alu 35 298 -14 752 170 15 30 chr2 132199023 132199158 -118488696 + AluJo SINE Alu 1 133 -169 259 206 68 0 chr2 132199170 132199243 -118488611 + Charlie5 DNA MER1_type 2392 2469 -143 1797 168 17 3 chr2 132199268 132199566 -118488288 - AluJo SINE Alu -1 311 10 732 250 13 0 chr2 132199982 132200134 -118487720 + AluJo SINE Alu 133 286 -26 1828 189 46 59 chr2 132201087 132201548 -118486306 - LTR42 LTR ERVL -11 484 30 183 42 0 0 chr2 132202824 132202848 -118485006 + (T)n Simple_repeat Simple_repeat 1 24 0 1847 85 4 4 chr2 132203034 132203270 -118484584 - AluY SINE Alu -14 297 62 1744 106 13 0 chr2 132204895 132205130 -118482724 + AluSq SINE Alu 1 238 -75 409 273 123 7 chr2 132205230 132205384 -118482470 + MLT1J1 LTR MaLR 250 421 -25 206 331 104 0 chr2 132205714 132205868 -118481986 - MIR SINE MIR -6 256 87 1237 160 3 145 chr2 132207000 132207344 -118480510 + AluJo SINE Alu 1 295 -17 1701 190 10 3 chr2 132207405 132207705 -118480149 + AluJo SINE Alu 3 304 -8 226 261 22 112 chr2 132208104 132208238 -118479616 + L2 LINE L2 3179 3300 -13 1854 139 3 30 chr2 132208374 132208677 -118479177 - AluSq SINE Alu -18 295 1 492 136 86 0 chr2 132208728 132208809 -118479045 - MER58B DNA MER1_type 0 341 254 21 0 0 0 chr2 132208850 132208871 -118478983 + AT_rich Low_complexity Low_complexity 1 21 0 501 278 139 14 chr2 132208978 132209187 -118478667 - MIR SINE MIR -6 256 22 1780 141 0 0 chr2 132210174 132210423 -118477431 + AluSg1 SINE Alu 3 251 -58 885 236 50 0 chr2 132210448 132210647 -118477207 + MER3 DNA MER1_type 1 209 0 4869 209 42 45 chr2 132211354 132212552 -118475302 - L1MC4a LINE L1 0 7808 6615 1038 211 24 0 chr2 132212545 132212753 -118475101 + L1MC4a LINE L1 6398 6610 -1198 * 362 183 73 24 chr2 132212757 132212854 -118475000 + L1ME3A LINE L1 5601 5702 -468 1889 168 13 0 chr2 132212854 132213157 -118474697 + AluJo SINE Alu 2 308 -4 499 103 35 0 chr2 132213161 132213248 -118474606 + GA-rich Low_complexity Low_complexity 2 91 0 634 239 162 19 chr2 132213259 132213567 -118474287 + L1ME3A LINE L1 5699 6097 -73 2046 125 14 7 chr2 132213993 132214289 -118473565 - AluSx SINE Alu -14 298 1 477 205 0 0 chr2 132214310 132214422 -118473432 + T-rich Low_complexity Low_complexity 1 112 0 318 216 14 0 chr2 132214627 132214701 -118473153 + MER105 DNA DNA 7 81 -123 1523 194 48 0 chr2 132214752 132214872 -118472982 + AluJb SINE Alu 1 114 -198 195 42 0 0 chr2 132214872 132214896 -118472958 + (TAA)n Simple_repeat Simple_repeat 2 25 0 1523 194 48 0 chr2 132214896 132215069 -118472785 + AluJb SINE Alu 114 308 -4 1043 246 50 13 chr2 132215090 132215391 -118472463 - LTR37A LTR ERV1 -114 312 1 2055 125 17 0 chr2 132215718 132216007 -118471847 + AluSg SINE Alu 1 294 -16 21 0 0 0 chr2 132216007 132216028 -118471826 + AT_rich Low_complexity Low_complexity 1 21 0 2490 71 0 13 chr2 132216032 132216343 -118471511 + AluSq SINE Alu 5 311 -2 303 306 50 28 chr2 132216366 132216546 -118471308 - MER31-int LTR ERV1 -2285 2651 2468 21 71 0 0 chr2 132216589 132216631 -118471223 + AT_rich Low_complexity Low_complexity 1 42 0 35 24 0 0 chr2 132216663 132216705 -118471149 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr2 132216783 132216808 -118471046 + AT_rich Low_complexity Low_complexity 1 25 0 1626 125 0 0 chr2 132216808 132217032 -118470822 + AluSg/x SINE Alu 82 305 -5 246 250 25 50 chr2 132217093 132217173 -118470681 + Charlie1a DNA MER1_type 53 130 -1325 1934 134 3 3 chr2 132217222 132217514 -118470340 + AluSx SINE Alu 3 294 -18 347 208 50 17 chr2 132217541 132217661 -118470193 + Charlie1a DNA MER1_type 1303 1426 -29 1705 148 48 0 chr2 132217781 132218052 -118469802 + AluSx SINE Alu 3 286 -26 1332 155 15 131 chr2 132218314 132218582 -118469272 - MER7A DNA MER2_type -2697 341 120 2274 102 7 0 chr2 132218582 132218885 -118468969 + AluSx SINE Alu 1 305 -7 1332 155 15 131 chr2 132218885 132218951 -118468903 - MER7A DNA MER2_type -2918 120 48 209 56 0 28 chr2 132219442 132219478 -118468376 + (CAAAA)n Simple_repeat Simple_repeat 5 39 0 17883 22 6 0 chr2 132219528 132221540 -118466314 + HERVK LTR ERVK 5125 7148 -95 441 63 11 168 chr2 132221540 132221635 -118466219 + SVA Other Other 857 936 -450 8454 50 8 0 chr2 132221635 132222596 -118465258 + LTR5 LTR ERVK 1 969 0 2374 115 0 0 chr2 132223627 132223939 -118463915 - AluSx SINE Alu 0 312 1 1651 158 19 22 chr2 132224203 132224526 -118463328 + L1 LINE L1 4250 4571 -1575 622 281 101 46 chr2 132224729 132224945 -118462909 - L1MC/D LINE L1 -2090 5718 5515 2336 111 3 0 chr2 132224945 132225251 -118462603 - AluSp SINE Alu -6 307 1 622 281 101 46 chr2 132225251 132225313 -118462541 - L1MC/D LINE L1 -2293 5515 5458 2049 126 3 31 chr2 132225313 132225353 -118462501 - AluSc SINE Alu 0 309 269 203 0 0 36 chr2 132225353 132225381 -118462473 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2049 126 3 31 chr2 132225381 132225657 -118462197 - AluSc SINE Alu -40 269 2 622 281 101 46 chr2 132225657 132225812 -118462042 - L1MC/D LINE L1 -2350 5458 5260 261 0 0 0 chr2 132226396 132226425 -118461429 + (A)n Simple_repeat Simple_repeat 1 29 0 2175 110 3 3 chr2 132226425 132226715 -118461139 + AluSq SINE Alu 1 290 -23 183 80 0 0 chr2 132226826 132226851 -118461003 + (GAA)n Simple_repeat Simple_repeat 3 27 0 2057 55 47 0 chr2 132227258 132227512 -118460342 + AluY SINE Alu 42 307 -4 340 240 32 56 chr2 132227522 132227647 -118460207 + MIR SINE MIR 25 146 -62 1693 71 18 5 chr2 132228996 132229220 -118458634 - L1P2 LINE L1 -486 5668 5442 289 61 20 20 chr2 132229620 132229669 -118458185 + (CA)n Simple_repeat Simple_repeat 2 50 0 25 31 0 0 chr2 132230415 132230447 -118457407 + AT_rich Low_complexity Low_complexity 1 32 0 3226 129 24 13 chr2 132231043 132231578 -118456276 + L1MC1 LINE L1 5536 6076 -257 716 295 106 9 chr2 132231622 132231961 -118455893 + L2 LINE L2 1194 1565 -1749 1941 175 71 29 chr2 132231973 132232504 -118455350 - MLT2A2 LTR ERVL 0 554 1 203 347 0 28 chr2 132232504 132232648 -118455206 + L2 LINE L2 1573 1712 -1602 268 306 120 0 chr2 132232829 132233045 -118454809 + L1P5 LINE L1 5293 5534 -622 499 297 15 20 chr2 132233566 132233761 -118454093 + L1MEc LINE L1 108 301 -6095 754 143 0 0 chr2 132234163 132234282 -118453572 - AluSg/x SINE Alu 0 312 194 2015 109 60 0 chr2 132234429 132234714 -118453140 - AluSx SINE Alu -10 302 1 333 172 0 0 chr2 132234919 132234983 -118452871 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 5562 83 50 8 chr2 132235093 132235886 -118451968 + L1PA8A LINE L1 5305 6131 0 438 227 40 68 chr2 132236083 132236259 -118451595 + MER31-int LTR ERV1 3562 3732 -2866 264 30 0 0 chr2 132236311 132236344 -118451510 + (TG)n Simple_repeat Simple_repeat 2 34 0 493 290 35 46 chr2 132236399 132236878 -118450976 + MER31-int LTR ERV1 2468 4545 -335 790 221 47 14 chr2 132236892 132237105 -118450749 + MER65C LTR ERV1 242 461 0 2228 139 6 19 chr2 132241369 132241735 -118446119 - MER46B DNA MER2_type 0 236 1 1605 278 87 37 chr2 132242942 132243949 -118443905 + L2 LINE L2 2256 3313 0 272 336 22 36 chr2 132244010 132244147 -118443707 - L2 LINE L2 -1 3312 3178 242 346 84 17 chr2 132244302 132244481 -118443373 - MIR SINE MIR -2 260 70 200 275 116 0 chr2 132244508 132244577 -118443277 + L2 LINE L2 3193 3269 -44 190 338 0 27 chr2 132244593 132244667 -118443187 - MIR SINE MIR -184 78 7 388 233 61 43 chr2 132244721 132244884 -118442970 + L1M4 LINE L1 2854 3019 -3127 944 196 28 0 chr2 132247561 132247740 -118440114 + AluSg/x SINE Alu 119 302 -8 2380 87 7 0 chr2 132247797 132248097 -118439757 + AluSx SINE Alu 3 304 -8 2151 141 0 0 chr2 132249145 132249444 -118438410 - AluSx SINE Alu -13 299 1 754 268 47 11 chr2 132251274 132251550 -118436304 + LTR33 LTR ERVL 10 295 -226 1790 168 13 22 chr2 132251674 132251989 -118435865 + AluJo SINE Alu 1 312 0 1675 164 13 3 chr2 132252076 132252374 -118435480 - AluJb SINE Alu -11 301 1 847 105 99 61 chr2 132253376 132253394 -118434460 - LTR23 LTR ERV1 -5 432 416 2083 109 3 13 chr2 132253394 132253697 -118434157 + AluSx SINE Alu 1 300 -12 847 105 99 61 chr2 132253697 132253728 -118434126 - LTR23 LTR ERV1 -21 416 388 1884 138 10 27 chr2 132253728 132254026 -118433828 + AluSx SINE Alu 1 293 -19 847 105 99 61 chr2 132254026 132254156 -118433698 - LTR23 LTR ERV1 -49 388 245 415 169 42 0 chr2 132254160 132254231 -118433623 - FLAM SINE Alu -24 119 46 1209 126 42 84 chr2 132254243 132254279 -118433575 - LTR23 LTR ERV1 -185 252 216 2133 118 3 0 chr2 132254279 132254575 -118433279 + AluSq SINE Alu 1 297 -16 2272 78 0 0 chr2 132254575 132254871 -118432983 + AluY SINE Alu 1 296 -15 1209 126 42 84 chr2 132254871 132255095 -118432759 - LTR23 LTR ERV1 -219 218 2 592 202 0 8 chr2 132255213 132255342 -118432512 - FLAM_A SINE Alu 0 142 15 1074 202 184 27 chr2 132255744 132256080 -118431774 - MLT1B LTR MaLR 0 390 2 1310 205 179 7 chr2 132256155 132256452 -118431402 - MER7A DNA MER2_type 0 346 1 262 185 0 0 chr2 132256458 132256512 -118431342 - L1ME4a LINE L1 0 6121 6068 522 105 58 0 chr2 132257503 132257589 -118430265 - AluSc SINE Alu 0 309 219 812 116 47 16 chr2 132258079 132258208 -118429646 - FLAM_C SINE Alu 0 133 1 2238 101 0 0 chr2 132258874 132259170 -118428684 + AluSq SINE Alu 1 296 -17 1421 192 85 70 chr2 132259554 132259785 -118428069 - Charlie1 DNA MER1_type 0 2761 2535 2182 107 0 0 chr2 132259785 132260085 -118427769 - AluSx SINE Alu -12 300 1 1421 192 85 70 chr2 132260085 132260312 -118427542 - Charlie1 DNA MER1_type -226 2535 2296 233 259 52 0 chr2 132260301 132260359 -118427495 - Charlie1 DNA MER1_type -2700 61 1 * 1597 173 3 3 chr2 132260434 132260723 -118427131 + AluJb SINE Alu 1 289 -23 1861 113 17 14 chr2 132261015 132261307 -118426547 + AluSx SINE Alu 1 293 -19 1264 73 98 139 chr2 132262011 132262052 -118425802 - MSTA LTR MaLR 0 428 387 1802 107 15 0 chr2 132262052 132262315 -118425539 + AluSx SINE Alu 1 267 -45 1264 73 98 139 chr2 132262315 132262547 -118425307 - MSTA LTR MaLR -41 387 166 402 103 0 0 chr2 132262547 132262605 -118425249 - AluS SINE Alu -232 80 23 435 229 10 0 chr2 132263872 132263968 -118423886 - THE1-int LTR MaLR -577 1003 907 1161 209 64 11 chr2 132263972 132264254 -118423600 + MSTA LTR MaLR 76 372 -56 612 172 164 8 chr2 132264319 132264453 -118423401 - MST-int LTR MaLR -990 661 507 5772 231 65 23 chr2 132264459 132266009 -118421845 + MSTA-int LTR MaLR 36 1651 0 468 176 28 37 chr2 132266009 132266117 -118421737 + MSTA LTR MaLR 1 107 -321 325 266 0 0 chr2 132266184 132266248 -118421606 + MSTA LTR MaLR 96 159 -269 1394 218 15 44 chr2 132266259 132266599 -118421255 + MSTA-int LTR MaLR 1322 1651 0 506 156 9 46 chr2 132266599 132266708 -118421146 + MSTA LTR MaLR 1 105 -323 263 208 19 0 chr2 132266795 132266848 -118421006 + THE1-int LTR MaLR 914 967 -613 * 777 215 189 21 chr2 132266846 132267079 -118420775 - THE1-int LTR MaLR -402 1178 907 383 185 152 0 chr2 132267083 132267175 -118420679 + MSTA LTR MaLR 66 171 -257 2811 226 72 31 chr2 132267176 132267924 -118419930 + MST-int LTR MaLR 873 1651 0 456 222 10 0 chr2 132267924 132268023 -118419831 + MSTA LTR MaLR 1 100 -328 250 309 49 0 chr2 132268075 132268156 -118419698 + MSTA LTR MaLR 75 159 -269 1384 216 15 41 chr2 132268163 132268506 -118419348 + MSTA-int LTR MaLR 1318 1651 0 497 179 21 0 chr2 132268506 132268601 -118419253 + MSTA LTR MaLR 1 97 -331 291 196 18 0 chr2 132268698 132268754 -118419100 + THE1-int LTR MaLR 911 967 -613 * 784 216 195 4 chr2 132268742 132268978 -118418876 - MST-int LTR MaLR -395 1256 976 424 293 79 6 chr2 132269001 132269165 -118418689 + MSTA LTR MaLR 99 274 -154 320 195 24 24 chr2 132269176 132269258 -118418596 - HSAT5 Satellite Satellite -2 84 3 387 220 0 12 chr2 132269517 132269616 -118418238 - HSAT5 Satellite Satellite -3 97 1 263 271 0 12 chr2 132269676 132269761 -118418093 - HSAT5 Satellite Satellite -2 84 1 723 94 0 29 chr2 132269777 132270540 -118417314 - HSAT5 Satellite Satellite 0 740 1 245 269 0 13 chr2 132270555 132270633 -118417221 - HSAT5 Satellite Satellite -1 85 9 1005 261 87 65 chr2 132272220 132272306 -118415548 + L1M4 LINE L1 3105 3188 -2958 2150 108 3 16 chr2 132272306 132272621 -118415233 + AluSp SINE Alu 1 311 -2 1005 261 87 65 chr2 132272621 132273039 -118414815 + L1M4 LINE L1 3188 3620 -2526 319 281 0 10 chr2 132273045 132273141 -118414713 + L1M4 LINE L1 3747 3841 -2305 * 744 274 73 35 chr2 132273139 132273225 -118414629 + L1M4 LINE L1 4055 4136 -2010 1791 95 4 0 chr2 132273225 132273466 -118414388 + AluY SINE Alu 1 242 -69 744 274 73 35 chr2 132273466 132273832 -118414022 + L1M4 LINE L1 4136 4524 -1622 211 295 147 39 chr2 132274455 132274611 -118413243 + MER5A DNA MER1_type 1 173 -16 271 190 290 10 chr2 132274819 132274919 -118412935 - MER97a DNA MER1_type? -721 173 46 471 91 0 0 chr2 132277351 132277417 -118410437 + L1PA6 LINE L1 6078 6143 -11 30 27 0 0 chr2 132278127 132278164 -118409690 + AT_rich Low_complexity Low_complexity 1 37 0 2152 101 7 0 chr2 132280764 132281060 -118406794 + AluSc SINE Alu 1 298 -11 1929 109 11 0 chr2 132281966 132282277 -118405577 - AluSq SINE Alu 0 330 17 1807 159 0 10 chr2 132282603 132282892 -118404962 + AluJo SINE Alu 1 286 -26 255 239 17 120 chr2 132283588 132283705 -118404149 + L2 LINE L2 3115 3219 -53 1393 162 83 4 chr2 132284273 132284551 -118403303 + AluSq SINE Alu 1 300 -13 247 279 110 57 chr2 132285002 132285176 -118402678 + MER5A DNA MER1_type 7 188 -1 316 128 0 128 chr2 132285287 132285381 -118402473 - L1PA4 LINE L1 -111 6044 5963 3582 92 6 0 chr2 132285486 132285967 -118401887 - L1PA4 LINE L1 -164 5990 5507 890 85 0 0 chr2 132285995 132286113 -118401741 + L1PA7 LINE L1 6033 6150 -4 431 331 0 0 chr2 132286686 132286819 -118401035 + MIR SINE MIR 23 155 -107 389 235 25 0 chr2 132286850 132286931 -118400923 - LTR16C LTR ERVL 0 491 409 * 1114 284 16 0 chr2 132286921 132287234 -118400620 - LTR16C LTR ERVL -28 463 146 453 50 0 0 chr2 132287338 132287398 -118400456 + (CA)n Simple_repeat Simple_repeat 2 61 0 21 57 0 0 chr2 132341088 132341123 -118346731 + AT_rich Low_complexity Low_complexity 1 35 0 347 266 28 46 chr2 132341302 132341411 -118346443 + MIR SINE MIR 155 261 -1 394 298 110 21 chr2 132341641 132341832 -118346022 + MIR SINE MIR 35 242 -20 940 272 63 57 chr2 132343011 132343458 -118344396 + L2 LINE L2 2791 3238 -75 228 152 0 22 chr2 132343648 132343694 -118344160 + CT-rich Low_complexity Low_complexity 2 46 0 794 211 39 28 chr2 132343702 132343882 -118343972 + MER58A DNA MER1_type 43 224 0 312 79 40 132 chr2 132343884 132343960 -118343894 - L1M4 LINE L1 -2905 3241 3173 1137 161 0 0 chr2 132343961 132344141 -118343713 - AluSg/x SINE Alu -1 311 132 416 212 16 109 chr2 132344156 132344349 -118343505 - L1MEc LINE L1 -3439 2776 2602 * 1378 240 94 33 chr2 132344346 132344636 -118343218 - L1MEc LINE L1 -3488 2727 2456 2136 90 7 0 chr2 132344636 132345028 -118342826 - AluSq SINE Alu 0 394 1 1378 240 94 33 chr2 132345028 132345135 -118342719 - L1MEc LINE L1 -3759 2456 2357 1425 182 80 14 chr2 132345135 132345410 -118342444 - AluJo SINE Alu -9 293 1 1378 240 94 33 chr2 132345410 132345844 -118342010 - L1MEc LINE L1 -3858 2357 1866 371 167 188 0 chr2 132345849 132345945 -118341909 - L1MB8 LINE L1 0 6178 6065 2443 58 0 0 chr2 132345949 132346259 -118341595 - AluY SINE Alu -1 310 1 1792 117 9 68 chr2 132346599 132346925 -118340929 - AluSx SINE Alu -5 307 1 262 319 140 6 chr2 132346969 132347126 -118340728 - MIR SINE MIR -30 232 55 209 387 0 21 chr2 132348017 132348110 -118339744 - MIR SINE MIR -82 126 36 522 302 39 35 chr2 132348688 132348763 -118339091 + MIR SINE MIR 11 84 -178 2113 113 0 0 chr2 132348763 132349056 -118338798 - AluSc SINE Alu -16 293 1 522 302 39 35 chr2 132349056 132349212 -118338642 + MIR SINE MIR 84 243 -19 589 241 54 49 chr2 132349788 132349991 -118337863 + MIR SINE MIR 56 259 -3 330 115 0 0 chr2 132350291 132350343 -118337511 + (CA)n Simple_repeat Simple_repeat 1 52 0 278 322 110 8 chr2 132350377 132350495 -118337359 - L2 LINE L2 -2 3270 3141 386 279 57 25 chr2 132350743 132350865 -118336989 - MIR SINE MIR -124 138 13 239 271 21 0 chr2 132351725 132351821 -118336033 + CT-rich Low_complexity Low_complexity 3 100 0 2357 63 0 10 chr2 132351883 132352186 -118335668 - AluY SINE Alu -11 300 1 391 267 53 111 chr2 132352454 132352716 -118335138 - MLT1I LTR MaLR -123 286 73 234 282 155 21 chr2 132352784 132352926 -118334928 - L2 LINE L2 -163 3109 2949 322 260 55 125 chr2 132353619 132353819 -118334035 + MIR SINE MIR 20 205 -57 399 304 70 4 chr2 132354456 132354632 -118333222 + MIR SINE MIR 36 225 -37 338 314 149 27 chr2 132354813 132355074 -118332780 + L2 LINE L2 3021 3313 0 622 207 6 6 chr2 132355566 132355747 -118332107 + (CAT)n Simple_repeat Simple_repeat 1 181 0 2177 70 92 0 chr2 132355890 132356161 -118331693 - AluY SINE Alu -15 296 1 406 232 49 31 chr2 132356379 132356569 -118331285 + MER110A LTR ERV1 313 482 -2 1801 176 10 3 chr2 132356605 132356912 -118330942 - AluJo SINE Alu -3 309 1 301 298 50 76 chr2 132357222 132357420 -118330434 + MIR SINE MIR 53 245 -17 1915 137 31 20 chr2 132357621 132357978 -118329876 - MER46B DNA MER2_type 0 236 1 663 231 66 42 chr2 132358629 132358841 -118329013 - MER20 DNA MER1_type -1 218 2 180 200 0 0 chr2 132359573 132359613 -118328241 + GA-rich Low_complexity Low_complexity 2 41 0 256 197 0 15 chr2 132359656 132359722 -118328132 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 322 341 39 29 chr2 132361018 132361226 -118326628 + MLT1L LTR MaLR 349 558 -57 2190 112 3 10 chr2 132361326 132361631 -118326223 + AluSx SINE Alu 1 303 -9 186 270 32 0 chr2 132366657 132366720 -118321134 + L2 LINE L2 3206 3270 -2 286 231 247 32 chr2 132368071 132368257 -118319597 - MIR SINE MIR -21 241 16 218 311 162 6 chr2 132368814 132368981 -118318873 - MIR3 SINE MIR -12 196 4 7407 88 8 21 chr2 132371143 132372228 -118315626 - MER11C LTR ERVK 0 1071 1 592 209 187 0 chr2 132375994 132376176 -118311678 - MER58B DNA MER1_type -8 333 118 288 0 0 0 chr2 132377087 132377119 -118310735 + (TG)n Simple_repeat Simple_repeat 2 33 0 262 98 59 0 chr2 132377708 132377759 -118310095 + L1MC4 LINE L1 7306 7359 -683 1919 50 0 25 chr2 132377856 132378094 -118309760 + AluY SINE Alu 79 310 -1 533 290 72 32 chr2 132378104 132378325 -118309529 + MIR SINE MIR 33 262 0 233 317 133 11 chr2 132379416 132379596 -118308258 + L1PB1 LINE L1 4094 4295 -1851 2380 84 24 0 chr2 132379616 132379914 -118307940 + AluY SINE Alu 1 305 -6 706 227 43 47 chr2 132379999 132380276 -118307578 + L1MC5 LINE L1 7168 7443 -518 306 248 43 116 chr2 132380300 132380558 -118307296 + L1PB1 LINE L1 5651 5889 -262 * 1119 142 57 88 chr2 132380331 132380627 -118307227 + L1MB7 LINE L1 5680 5966 -212 2494 53 0 0 chr2 132380656 132380961 -118306893 + AluY SINE Alu 1 305 0 617 131 11 162 chr2 132381001 132381192 -118306662 + L1MB7 LINE L1 5961 6122 -62 677 232 103 29 chr2 132381270 132381542 -118306312 + L1MC5 LINE L1 7516 7807 -154 386 326 72 33 chr2 132381617 132381893 -118305961 + L1ME LINE L1 5281 5567 -597 2356 101 0 3 chr2 132381900 132382207 -118305647 - AluSq SINE Alu -4 309 4 659 178 0 31 chr2 132382625 132382754 -118305100 - FLAM_C SINE Alu -17 126 2 313 211 0 0 chr2 132383081 132383138 -118304716 + L1MA9 LINE L1 5205 5261 -885 1791 171 57 3 chr2 132383147 132383481 -118304373 - MLT1A1 LTR MaLR -13 352 1 2790 156 56 13 chr2 132383482 132384067 -118303787 + L1MA9 LINE L1 5258 5934 -378 247 345 110 0 chr2 132385697 132385842 -118302012 + MER3 DNA MER1_type 4 164 -45 2457 61 0 7 chr2 132386647 132386944 -118300910 - AluY SINE Alu -16 295 1 2423 59 17 0 chr2 132387232 132387520 -118300334 - AluSg SINE Alu -9 301 9 1816 254 55 8 chr2 132389367 132389894 -118297960 - MER92C LTR ERV1 -2 552 1 450 281 273 22 chr2 132390226 132390585 -118297269 - L2 LINE L2 -2 3311 2863 795 302 137 23 chr2 132390745 132391447 -118296407 - L2 LINE L2 -735 2579 1798 255 154 77 31 chr2 132391527 132391592 -118296262 - L2 LINE L2 -249 3064 2997 219 288 38 12 chr2 132392335 132392415 -118295439 - L2 LINE L2 -547 2767 2686 392 271 112 29 chr2 132392446 132392680 -118295174 - L1M LINE L1 -803 5343 5164 600 41 0 0 chr2 132393793 132393866 -118293988 + tRNA-Glu-GAA tRNA tRNA 1 73 -2 729 184 46 0 chr2 132394528 132394680 -118293174 + AluJb SINE Alu 136 294 -18 186 43 0 0 chr2 132394758 132394781 -118293073 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 3094 239 54 26 chr2 132394835 132395780 -118292074 + L1MCb LINE L1 1 965 -5081 2844 192 27 42 chr2 132395846 132396517 -118291337 - MLT1C-int LTR MaLR -487 884 224 1787 117 83 40 chr2 132396518 132396843 -118291011 - MER1B DNA MER1_type 0 339 1 1018 177 72 0 chr2 132396843 132397052 -118290802 - MLT1C-int LTR MaLR -1142 229 6 785 247 138 33 chr2 132397057 132397370 -118290484 - MLT1C LTR MaLR 0 505 132 2209 126 3 0 chr2 132397370 132397679 -118290175 + AluSp SINE Alu 1 310 -3 216 0 0 0 chr2 132397684 132397708 -118290146 + (A)n Simple_repeat Simple_repeat 1 24 0 245 139 70 116 chr2 132397947 132398033 -118289821 + MER74C LTR ERVL 5 86 -374 950 185 5 16 chr2 132398439 132398628 -118289226 + AluSc SINE Alu 117 303 -6 2074 174 134 17 chr2 132398629 132399168 -118288686 - L1MB7 LINE L1 -155 6029 5428 262 59 0 10 chr2 132399166 132399216 -118288638 - L1MB4 LINE L1 0 6183 6135 * 2761 144 109 44 chr2 132399183 132399675 -118288179 - L1MB4 LINE L1 -31 6149 5667 2385 76 0 0 chr2 132399675 132399985 -118287869 + AluY SINE Alu 1 311 0 2761 144 109 44 chr2 132399985 132400138 -118287716 - L1MB4 LINE L1 -513 5667 5525 538 258 147 29 chr2 132400151 132400457 -118287397 - MER7A DNA MER2_type -4 342 3 2983 176 94 20 chr2 132400469 132401212 -118286642 - L1MB4 LINE L1 -706 5468 4668 1253 161 106 37 chr2 132401223 132401496 -118286358 + MER68 LTR ERV1 1 292 -270 1467 175 133 3 chr2 132401498 132401858 -118285996 - L1MB4 LINE L1 -2197 3949 3543 273 246 164 0 chr2 132401862 132401984 -118285870 - L1MEc LINE L1 -4537 1859 1718 969 209 24 10 chr2 132401986 132402192 -118285662 - AluJo SINE Alu -13 299 91 534 135 87 0 chr2 132402214 132402318 -118285536 - FLAM_A SINE Alu 0 142 30 1266 260 86 39 chr2 132402341 132402552 -118285302 - L1MEc LINE L1 -4669 1727 1527 2049 125 14 3 chr2 132402552 132402840 -118285014 + AluSx SINE Alu 1 291 -21 1266 260 86 39 chr2 132402840 132403489 -118284365 - L1MEc LINE L1 -4869 1527 758 478 332 108 50 chr2 132403507 132404073 -118283781 - L1MEc LINE L1 -5720 676 78 348 279 74 8 chr2 132405037 132405159 -118282695 + MIR SINE MIR 123 252 -10 1980 104 10 0 chr2 132406706 132406994 -118280860 + AluSx SINE Alu 11 301 -11 236 235 0 0 chr2 132407493 132407544 -118280310 + G-rich Low_complexity Low_complexity 6 56 0 243 306 11 33 chr2 132408833 132409013 -118278841 + (CAGA)n Simple_repeat Simple_repeat 1 176 0 886 164 115 0 chr2 132409463 132409628 -118278226 - AluJo SINE Alu -128 184 1 481 309 76 19 chr2 132409891 132410205 -118277649 + LTR16C LTR ERVL 66 397 -94 604 193 78 118 chr2 132410335 132410578 -118277276 + LTR40b LTR ERVL 128 354 -108 1879 130 0 36 chr2 132410578 132410886 -118276968 - AluSg SINE Alu -13 297 1 604 193 78 118 chr2 132410886 132410990 -118276864 + LTR40b LTR ERVL 354 461 -1 274 292 52 10 chr2 132410998 132411094 -118276760 + L2 LINE L2 2881 2980 -333 * 462 287 54 12 chr2 132411078 132411245 -118276609 + L2 LINE L2 3115 3288 -25 228 130 0 43 chr2 132411411 132411457 -118276397 + LTR40c LTR ERVL 4 47 -418 1814 213 49 22 chr2 132411469 132411919 -118275935 + MLT1C LTR MaLR 6 467 0 445 239 71 1 chr2 132411919 132412150 -118275704 + LTR40b LTR ERVL 49 324 -138 844 196 0 0 chr2 132415211 132415369 -118272485 - AluJb SINE Alu -18 294 137 452 219 14 41 chr2 132416222 132416368 -118271486 + MLT1E1 LTR MaLR 513 654 0 183 222 0 0 chr2 132416889 132416925 -118270929 + L2 LINE L2 3277 3312 -1 1095 98 74 0 chr2 132417214 132417377 -118270477 - AluSc SINE Alu 0 309 135 1415 224 115 11 chr2 132417455 132417963 -118269891 + MER90 LTR ERV1 1 608 -6 282 188 0 12 chr2 132417976 132418064 -118269790 - L1ME LINE L1 -528 5593 5512 403 223 5 27 chr2 132418283 132418467 -118269387 + (TGG)n Simple_repeat Simple_repeat 1 180 0 2306 70 0 3 chr2 132418757 132419057 -118268797 - AluY SINE Alu -12 299 1 2123 91 3 34 chr2 132421673 132421993 -118265861 + AluY SINE Alu 1 310 -1 206 233 0 68 chr2 132423231 132423304 -118264550 + CT-rich Low_complexity Low_complexity 1 68 0 2347 74 0 3 chr2 132423842 132424153 -118263701 - AluY SINE Alu 0 311 2 680 170 67 61 chr2 132424976 132425141 -118262713 - MLT1B LTR MaLR -223 167 2 1335 181 200 0 chr2 132425219 132425489 -118262365 - MER7A DNA MER2_type -23 323 2 615 311 81 0 chr2 132425554 132425802 -118262052 - L1ME LINE L1 -354 5767 5500 1799 226 107 31 chr2 132426011 132426681 -118261173 - L1MC4 LINE L1 -151 7891 7012 1239 204 80 73 chr2 132426712 132427188 -118260666 - L1MC4 LINE L1 -2 8040 7562 2156 87 28 7 chr2 132427438 132427727 -118260127 + AluSg SINE Alu 2 296 -14 440 282 141 33 chr2 132427748 132427989 -118259865 - L1ME LINE L1 -1094 5052 4786 5668 197 10 9 chr2 132428584 132429744 -118258110 - L1P LINE L1 -1711 4435 3274 1521 42 5 0 chr2 132429751 132429941 -118257913 + L1P LINE L1 4463 4653 -1493 2185 110 3 3 chr2 132431048 132431358 -118256496 + AluSg SINE Alu 1 310 0 1978 101 0 30 chr2 132431682 132431978 -118255876 - AluSx SINE Alu -25 287 1 2082 92 10 0 chr2 132432730 132433022 -118254832 + AluY SINE Alu 1 295 -16 651 219 52 38 chr2 132433239 132433526 -118254328 + pTR5 LTR ERV1 738 1028 -1410 3046 109 279 9 chr2 132433605 132434147 -118253707 + LTR12 LTR ERV1 1 688 0 21 0 0 0 chr2 132434752 132434773 -118253081 + AT_rich Low_complexity Low_complexity 1 21 0 459 241 17 0 chr2 132435013 132435129 -118252725 - L1M4 LINE L1 -607 5577 5460 21 0 0 0 chr2 132435278 132435299 -118252555 + AT_rich Low_complexity Low_complexity 1 21 0 1670 159 0 20 chr2 132435861 132436156 -118251698 + AluJb SINE Alu 1 289 -23 304 144 44 11 chr2 132436159 132436249 -118251605 + GA-rich Low_complexity Low_complexity 4 96 0 404 353 123 26 chr2 132436449 132436831 -118251023 + L2 LINE L2 285 703 -2611 369 283 162 44 chr2 132436848 132436944 -118250910 + L2 LINE L2 2253 2336 -978 611 201 7 50 chr2 132436944 132437083 -118250771 + FLAM_A SINE Alu 1 133 0 369 283 162 44 chr2 132437083 132437301 -118250553 + L2 LINE L2 2336 2604 -710 24 0 0 0 chr2 132437402 132437426 -118250428 + AT_rich Low_complexity Low_complexity 1 24 0 2438 65 0 0 chr2 132437427 132437736 -118250118 - AluY SINE Alu -2 309 1 294 146 106 163 chr2 132438359 132438482 -118249372 - MER74A LTR ERVL -12 546 431 627 134 116 9 chr2 132438501 132438613 -118249241 - MER74C LTR ERVL -333 127 4 434 185 68 75 chr2 132438662 132438808 -118249046 + MLT1C LTR MaLR 1 145 -322 216 0 0 0 chr2 132438821 132438845 -118249009 + (T)n Simple_repeat Simple_repeat 1 24 0 245 161 6 199 chr2 132438874 132439190 -118248664 - AluSq SINE Alu -11 292 38 22 35 0 0 chr2 132441053 132441082 -118246772 + AT_rich Low_complexity Low_complexity 1 29 0 737 214 49 31 chr2 132441989 132442213 -118245641 - MER65C LTR ERV1 -4 457 230 537 288 36 47 chr2 132442217 132442693 -118245161 - MER4-int LTR ERV1 -335 4545 2468 459 0 0 0 chr2 132442745 132442796 -118245058 + (CA)n Simple_repeat Simple_repeat 2 52 0 586 227 17 45 chr2 132442848 132443024 -118244830 - MER4-int LTR ERV1 -2866 3732 3562 5616 85 48 11 chr2 132443232 132444047 -118243807 - L1PA8A LINE L1 0 6131 5287 332 179 13 0 chr2 132444140 132444218 -118243636 + (TA)n Simple_repeat Simple_repeat 1 79 0 773 190 92 18 chr2 132444349 132444512 -118243342 - MER3 DNA MER1_type 0 209 35 186 71 0 0 chr2 132444536 132444564 -118243290 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1733 117 8 0 chr2 132444570 132444819 -118243035 - AluSg1 SINE Alu -58 251 1 226 350 81 27 chr2 132445376 132445562 -118242292 - MLT1L LTR MaLR -224 391 196 586 283 151 9 chr2 132445790 132446009 -118241845 + MIR SINE MIR 7 256 -6 474 169 84 0 chr2 132446176 132446259 -118241595 + MER58B DNA MER1_type 252 341 0 235 246 92 62 chr2 132446262 132446310 -118241544 + L1MEd LINE L1 31 76 -6043 1840 138 3 28 chr2 132446310 132446629 -118241225 + AluSq SINE Alu 1 311 -2 235 246 92 62 chr2 132446629 132446710 -118241144 + L1MEd LINE L1 76 164 -5955 328 254 69 95 chr2 132446768 132446957 -118240897 - L2 LINE L2 -13 3300 3117 1473 214 10 3 chr2 132447307 132447615 -118240239 - AluJo SINE Alu 0 312 3 1234 209 6 39 chr2 132447676 132447987 -118239867 - AluJo SINE Alu -11 301 1 247 333 107 0 chr2 132449112 132449271 -118238583 + MIR SINE MIR 87 262 0 1076 269 95 23 chr2 132449595 132449986 -118237868 - MLT1J1 LTR MaLR -25 421 3 259 272 98 0 chr2 132450018 132450110 -118237744 - MLT1J1-int LTR MaLR -22 1713 1613 2261 200 56 19 chr2 132450628 132451114 -118236740 - LTR22 LTR ERVK -5 504 1 305 341 0 0 chr2 132451312 132451394 -118236460 - L2 LINE L2 0 3272 3191 449 288 128 0 chr2 132452665 132452908 -118234946 + L1ME4a LINE L1 5651 5924 -197 336 275 120 21 chr2 132455087 132455229 -118232625 - L1M4 LINE L1 -2795 3351 3196 1453 257 77 7 chr2 132455338 132455886 -118231968 - L1M4 LINE L1 -3010 3136 2551 9833 196 55 40 chr2 132455924 132456416 -118231438 - L1MB4 LINE L1 -40 6140 5657 888 161 0 0 chr2 132456416 132456546 -118231308 - FLAM_A SINE Alu 0 133 4 9833 196 55 40 chr2 132456546 132457569 -118230285 - L1MB4 LINE L1 -523 5657 4650 2299 75 3 10 chr2 132457569 132457874 -118229980 - AluY SINE Alu -8 303 1 9833 196 55 40 chr2 132457874 132459356 -118228498 - L1MB4 LINE L1 -1530 4650 3191 2179 67 24 7 chr2 132459356 132459653 -118228201 - AluY SINE Alu -9 302 1 9833 196 55 40 chr2 132459653 132460403 -118227451 - L1MB4 LINE L1 -2989 3191 2334 1910 144 0 0 chr2 132460403 132460701 -118227153 - AluSx SINE Alu -14 298 1 9833 196 55 40 chr2 132460701 132460829 -118227025 - L1MB4 LINE L1 -3846 2334 2209 2051 112 0 10 chr2 132460829 132461125 -118226729 - AluSx SINE Alu -8 304 12 2131 101 0 7 chr2 132461162 132461458 -118226396 + AluSg SINE Alu 3 296 -14 262 250 98 18 chr2 132461463 132461575 -118226279 + MER67C LTR ERV1 542 662 -48 1897 129 16 13 chr2 132462290 132462593 -118225261 + AluJb SINE Alu 1 304 -8 527 277 72 26 chr2 132462985 132463180 -118224674 - MIR SINE MIR -36 226 23 29 0 0 0 chr2 132463655 132463684 -118224170 + AT_rich Low_complexity Low_complexity 1 29 0 1815 132 16 3 chr2 132464593 132464897 -118222957 + AluSq SINE Alu 1 308 -5 456 149 106 11 chr2 132465428 132465522 -118222332 + MER4A LTR ERV1 1 103 -561 252 189 19 19 chr2 132465519 132465572 -118222282 + MER4A LTR ERV1 261 313 -351 * 225 158 53 0 chr2 132466635 132466692 -118221162 + (CTG)n Simple_repeat Simple_repeat 1 60 0 1905 125 4 0 chr2 132466754 132467065 -118220789 - AluSx SINE Alu 0 312 1 4320 200 19 13 chr2 132467065 132468303 -118219551 - L1M4 LINE L1 -3000 4565 3316 747 270 65 23 chr2 132468304 132468567 -118219287 - L1M4 LINE L1 -5812 1651 1378 1464 105 14 0 chr2 132468718 132468927 -118218927 - AluSx SINE Alu -26 284 73 539 87 0 0 chr2 132469055 132469124 -118218730 - AluSx SINE Alu -243 70 2 201 147 0 0 chr2 132469149 132469183 -118218671 + (TA)n Simple_repeat Simple_repeat 2 35 0 753 206 28 79 chr2 132470006 132470108 -118217746 - MER3 DNA MER1_type -6 203 116 2219 94 3 0 chr2 132470108 132470407 -118217447 - AluY SINE Alu -11 300 1 753 206 28 79 chr2 132470407 132470518 -118217336 - MER3 DNA MER1_type -93 116 1 327 250 67 30 chr2 132470543 132470816 -118217038 - L1MC/D LINE L1 -719 5432 5286 581 192 117 0 chr2 132471054 132471174 -118216680 + AluJ SINE Alu 2 135 -177 23 0 0 0 chr2 132471696 132471719 -118216135 + AT_rich Low_complexity Low_complexity 1 23 0 1530 201 27 74 chr2 132472820 132473264 -118214590 - MLT1D LTR MaLR -82 423 1 434 281 121 25 chr2 132473470 132473669 -118214185 + L3 LINE CR1 413 630 -947 749 186 158 14 chr2 132475766 132475987 -118211867 - Charlie5 DNA MER1_type 0 2624 2372 362 308 0 33 chr2 132476036 132476156 -118211698 + MIR SINE MIR 77 192 -70 1444 125 0 75 chr2 132476386 132476707 -118211147 + AluSx SINE Alu 9 305 -7 772 236 39 25 chr2 132476720 132476923 -118210931 + MIR SINE MIR 1 206 -56 3521 82 11 2 chr2 132486024 132486478 -118201376 + LTR22A LTR ERVK 1 458 0 311 123 0 49 chr2 132487442 132487523 -118200331 + (TG)n Simple_repeat Simple_repeat 2 78 0 435 202 20 0 chr2 132489688 132489787 -118198067 + FLAM_C SINE Alu 6 106 -37 626 150 53 0 chr2 132490200 132490333 -118197521 + AluJ SINE Alu 141 280 -32 198 208 0 0 chr2 132490333 132490381 -118197473 + A-rich Low_complexity Low_complexity 3 50 0 1982 104 3 7 chr2 132490705 132491002 -118196852 - AluSc SINE Alu -13 296 1 825 134 8 0 chr2 132491866 132491993 -118195861 + FLAM_C SINE Alu 5 132 -1 379 299 13 78 chr2 132492001 132492155 -118195699 + L1MC4a LINE L1 5699 5842 -1966 555 270 64 19 chr2 132492157 132492424 -118195430 + L1M4 LINE L1 4946 5224 -922 13534 129 36 37 chr2 132492426 132492628 -118195226 - Tigger1 DNA MER2_type 0 2418 2217 1277 192 24 28 chr2 132492628 132492919 -118194935 + AluJo SINE Alu 1 290 -22 13534 129 36 37 chr2 132492919 132493396 -118194458 - Tigger1 DNA MER2_type -201 2217 1741 2116 109 13 3 chr2 132493396 132493700 -118194154 - AluSc SINE Alu -2 307 1 13534 129 36 37 chr2 132493700 132494801 -118193053 - Tigger1 DNA MER2_type -677 1741 637 2027 128 0 16 chr2 132494801 132495113 -118192741 - AluJb SINE Alu -5 307 1 13534 129 36 37 chr2 132495113 132495696 -118192158 - Tigger1 DNA MER2_type -1781 637 55 206 62 31 0 chr2 132495697 132495729 -118192125 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 973 214 67 11 chr2 132496199 132496484 -118191370 - L1 LINE L1 -912 5234 4934 2892 219 6 23 chr2 132497159 132497884 -118189970 - L1 LINE L1 -1173 4973 4262 1738 83 45 0 chr2 132497889 132498153 -118189701 + L1PB1 LINE L1 5254 5529 -622 1280 125 5 15 chr2 132498153 132498353 -118189501 + L1PB1 LINE L1 5952 6149 -2 2399 139 90 3 chr2 132498688 132499075 -118188779 - MER83 LTR ERV1 -27 421 1 411 211 20 41 chr2 132500615 132500762 -118187092 + GA-rich Low_complexity Low_complexity 2 145 0 813 167 29 6 chr2 132501406 132501580 -118186274 - L1MB2 LINE L1 -1 6170 5993 31 44 0 0 chr2 132501764 132501809 -118186045 + AT_rich Low_complexity Low_complexity 1 45 0 2988 204 52 37 chr2 132501939 132502823 -118185031 + L1 LINE L1 4440 5336 -810 563 249 92 77 chr2 132503945 132504668 -118183186 + HSREP522 Satellite telomeric 1 733 -168 338 236 41 0 chr2 132505852 132505975 -118181879 + CT-rich Low_complexity Low_complexity 2 129 0 898 114 7 14 chr2 132506150 132506290 -118181564 - MER85 DNA T2_type 0 139 1 2051 103 0 17 chr2 132506468 132506768 -118181086 + AluY SINE Alu 6 300 -11 298 243 43 0 chr2 132506829 132506899 -118180955 + L2 LINE L2 3170 3242 -71 207 146 0 0 chr2 132706965 132707006 -117980848 + (TG)n Simple_repeat Simple_repeat 1 41 0 230 180 33 16 chr2 132707218 132707279 -117980575 + T-rich Low_complexity Low_complexity 5 66 0 1163 262 70 32 chr2 132707963 132708337 -117979517 + LTR16A LTR ERVL 17 404 -46 2762 264 44 26 chr2 132708395 132708509 -117979345 + HERV16 LTR ERVL 42 152 -4844 1988 137 13 13 chr2 132708509 132708816 -117979038 + AluJb SINE Alu 1 307 -5 2762 264 44 26 chr2 132708816 132710897 -117976957 + HERV16 LTR ERVL 152 2363 -2633 2451 66 0 0 chr2 132710898 132711184 -117976670 - AluY SINE Alu -25 286 1 301 315 46 0 chr2 132711291 132711399 -117976455 + L2 LINE L2 3201 3313 0 223 281 18 0 chr2 132711409 132711466 -117976388 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 1991 154 0 10 chr2 132713919 132714224 -117973630 + AluJb SINE Alu 1 302 -10 2094 219 23 5 chr2 132714628 132715026 -117972828 + Tigger5 DNA MER2_type 1 405 -1918 452 155 12 24 chr2 132715041 132715125 -117972729 + Tigger5 DNA MER2_type 2240 2322 -1 1226 161 22 39 chr2 132715494 132715724 -117972130 + AluJo SINE Alu 87 312 0 2446 162 89 17 chr2 132716248 132716871 -117970983 + MER39 LTR ERV1 1 707 0 188 281 37 24 chr2 132717153 132717235 -117970619 + L2 LINE L2 3211 3293 -20 319 284 90 32 chr2 132718299 132718454 -117969400 - MIR3 SINE MIR -18 190 27 273 243 93 9 chr2 132718899 132719006 -117968848 + L2 LINE L2 3197 3312 -1 1747 161 16 10 chr2 132719142 132719446 -117968408 + AluJo SINE Alu 3 308 -4 1827 170 40 0 chr2 132720961 132721261 -117966593 + AluJo SINE Alu 1 312 0 409 217 11 0 chr2 132721553 132721645 -117966209 - MIR SINE MIR -97 165 73 200 271 125 31 chr2 132721893 132721989 -117965865 + MIR SINE MIR 104 208 -54 301 282 8 38 chr2 132722090 132722221 -117965633 + MER5B DNA MER1_type 8 134 -44 230 304 35 0 chr2 132722229 132722344 -117965510 + L3 LINE CR1 1435 1553 -24 2227 130 0 0 chr2 132722664 132722971 -117964883 - AluSx SINE Alu -5 307 1 423 0 0 0 chr2 132722987 132723034 -117964820 + (CA)n Simple_repeat Simple_repeat 2 48 0 211 352 89 39 chr2 132724660 132725041 -117962813 + L2 LINE L2 2420 2819 -495 360 248 70 23 chr2 132725306 132725435 -117962419 + L2 LINE L2 3137 3271 -1 208 358 0 28 chr2 132725436 132725545 -117962309 + GA-rich Low_complexity Low_complexity 1 106 0 2067 130 0 30 chr2 132725882 132726181 -117961673 - AluSx SINE Alu -22 290 1 192 355 108 16 chr2 132729015 132729201 -117958653 + L3 LINE CR1 1370 1572 -5 311 267 30 37 chr2 132729447 132729582 -117958272 - MIR SINE MIR 0 262 129 1737 147 23 30 chr2 132730055 132730355 -117957499 - AluJb SINE Alu -3 309 12 521 246 93 51 chr2 132730454 132730535 -117957319 + MER102a DNA MER1_type 72 148 -1269 2494 75 0 7 chr2 132730535 132730841 -117957013 + AluY SINE Alu 1 304 -7 521 246 93 51 chr2 132730841 132730974 -117956880 + MER102a DNA MER1_type 148 295 -35 309 51 0 0 chr2 132731176 132731215 -117956639 + (CA)n Simple_repeat Simple_repeat 2 40 0 201 94 0 0 chr2 132732486 132732518 -117955336 + (CA)n Simple_repeat Simple_repeat 1 32 0 338 300 128 28 chr2 132732927 132733107 -117954747 + MIR SINE MIR 28 225 -37 913 280 92 10 chr2 132733330 132733741 -117954113 - L1ME4a LINE L1 -2 6119 5675 302 286 46 80 chr2 132733777 132733952 -117953902 - L1ME4a LINE L1 -543 5578 5410 646 185 108 0 chr2 132734349 132734479 -117953375 - MER21B LTR ERV1 -365 498 355 312 198 77 11 chr2 132735240 132735331 -117952523 + L2 LINE L2 3217 3313 0 332 244 39 119 chr2 132735553 132735865 -117951989 - L1ME4a LINE L1 -129 5992 5706 2185 151 8 24 chr2 132736204 132736576 -117951278 - MER47A DNA MER2_type 0 366 1 7446 118 13 5 chr2 132736674 132737203 -117950651 - L1MA2 LINE L1 0 6304 5781 2236 143 25 6 chr2 132737203 132737560 -117950294 - THE1B LTR MaLR 0 364 1 7446 118 13 5 chr2 132737560 132738941 -117948913 - L1MA2 LINE L1 -523 5781 4377 1620 58 5 0 chr2 132738940 132739147 -117948707 - L1M1 LINE L1 -746 5559 5352 * 22 35 0 0 chr2 132739153 132739182 -117948672 + AT_rich Low_complexity Low_complexity 1 29 0 6166 169 34 15 chr2 132741125 132742369 -117945485 - L1M1 LINE L1 -937 5367 3211 2553 49 28 25 chr2 132742369 132742693 -117945161 - LTR17 LTR ERV1 -455 325 1 8472 41 9 0 chr2 132742693 132743671 -117944183 - HERV17 LTR ERV1 0 8626 7640 1423 81 22 5 chr2 132743657 132743842 -117944012 - HERV17 LTR ERV1 -3362 5264 5077 * 2211 241 112 46 chr2 132743842 132743930 -117943924 - L1M1 LINE L1 -167 2340 2259 1898 147 3 38 chr2 132743930 132744243 -117943611 - AluJb SINE Alu -10 302 1 2211 241 112 46 chr2 132744243 132744672 -117943182 - L1M1 LINE L1 -248 2259 1860 2211 111 0 25 chr2 132744672 132744988 -117942866 - AluSx SINE Alu -4 308 1 2211 241 112 46 chr2 132744988 132745081 -117942773 - L1M1 LINE L1 -647 1860 1775 1676 165 120 30 chr2 132745081 132745415 -117942439 - MLT1A1 LTR MaLR -1 364 1 2211 241 112 46 chr2 132745415 132745447 -117942407 - L1M1 LINE L1 -732 1775 1747 765 206 62 57 chr2 132745447 132745656 -117942198 + MER63A DNA MER1_type 1 210 0 2211 241 112 46 chr2 132745656 132746182 -117941672 - L1M1 LINE L1 -760 1747 1177 659 231 106 10 chr2 132746773 132746972 -117940882 - MIR SINE MIR 0 262 45 329 327 0 0 chr2 132747705 132747809 -117940045 - MIR3 SINE MIR -34 174 71 287 264 28 14 chr2 132749192 132749264 -117938590 - MIR3 SINE MIR -49 159 87 465 261 192 69 chr2 132750642 132751002 -117936852 + MLT1J LTR MaLR 80 483 -28 451 167 29 29 chr2 132751726 132751828 -117936026 + MER53 DNA DNA 5 106 -83 1810 176 54 25 chr2 132751946 132752299 -117935555 - MLT1A1 LTR MaLR -2 363 1 196 293 16 89 chr2 132752374 132752497 -117935357 + L2 LINE L2 3139 3252 -20 268 389 13 20 chr2 132752530 132752679 -117935175 + MIR3 SINE MIR 12 159 -49 1810 194 31 17 chr2 132753272 132753632 -117934222 - MLT1A1 LTR MaLR 0 365 1 189 351 86 7 chr2 132754212 132754363 -117933491 - L2 LINE L2 -226 3046 2884 680 247 24 0 chr2 132754404 132754574 -117933280 + MER117 DNA MER1_type 3 176 -21 261 308 122 29 chr2 132756050 132756222 -117931632 - MIR3 SINE MIR -16 192 5 665 217 56 6 chr2 132756489 132756612 -117931242 + MIR SINE MIR 76 210 -52 318 50 0 0 chr2 132756612 132756652 -117931202 + (CA)n Simple_repeat Simple_repeat 2 41 0 665 217 56 6 chr2 132756652 132756689 -117931165 + MIR SINE MIR 210 244 -18 338 216 45 0 chr2 132757311 132757399 -117930455 - MER5A DNA MER1_type -89 100 9 598 268 56 38 chr2 132757406 132757619 -117930235 + LTR16C LTR ERVL 275 491 0 271 248 30 59 chr2 132757774 132757875 -117929979 - MLT1J LTR MaLR -36 475 378 223 347 11 21 chr2 132759079 132759174 -117928680 + MIR SINE MIR 60 153 -109 325 121 52 0 chr2 132759184 132759242 -117928612 - MIR SINE MIR -16 246 186 269 259 0 0 chr2 132759268 132759326 -117928528 + MIR SINE MIR 186 243 -19 198 103 0 0 chr2 132759672 132759701 -117928153 + (A)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr2 132763623 132763644 -117924210 + AT_rich Low_complexity Low_complexity 1 21 0 529 338 22 13 chr2 132764051 132764276 -117923578 - MIR SINE MIR -23 239 13 1009 138 21 113 chr2 132766573 132766813 -117921041 + MER20 DNA MER1_type 1 218 -1 2072 181 19 3 chr2 132766903 132767262 -117920592 + MLT1A1 LTR MaLR 1 365 0 187 296 0 14 chr2 132767386 132767457 -117920397 + L2 LINE L2 3125 3194 -78 759 250 103 22 chr2 132768283 132768515 -117919339 - MIR SINE MIR 0 262 12 180 220 60 0 chr2 132768729 132768779 -117919075 + L2 LINE L2 3261 3313 0 1586 181 50 7 chr2 132768830 132769009 -117918845 - AluJb SINE Alu -1 311 112 180 0 0 0 chr2 132769009 132769029 -117918825 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 1586 181 50 7 chr2 132769029 132769147 -117918707 - AluJb SINE Alu -200 112 1 180 293 13 27 chr2 132769216 132769291 -117918563 - L2 LINE L2 -2 3270 3197 334 208 0 52 chr2 132770082 132770159 -117917695 + L2 LINE L2 3194 3266 -47 1577 191 52 34 chr2 132770163 132770488 -117917366 - MER58B DNA MER1_type -10 331 1 689 281 70 52 chr2 132771548 132772032 -117915822 + L1ME LINE L1 5318 5810 -311 2004 119 0 33 chr2 132772348 132772650 -117915204 - AluSx SINE Alu -6 306 15 1888 186 30 0 chr2 132772896 132773229 -117914625 + MER7A DNA MER2_type 5 345 -1 1919 135 16 20 chr2 132773972 132774275 -117913579 + AluSx SINE Alu 1 302 -10 226 161 36 18 chr2 132774632 132774688 -117913166 + T-rich Low_complexity Low_complexity 3 59 0 828 153 0 0 chr2 132774722 132774846 -117913008 + FLAM_A SINE Alu 1 124 -9 2324 144 2 49 chr2 132774879 132775049 -117912805 + MLT1B LTR MaLR 1 177 -213 2633 55 0 3 chr2 132775049 132775360 -117912494 - AluY SINE Alu -1 310 1 2324 144 2 49 chr2 132775360 132775598 -117912256 + MLT1B LTR MaLR 177 390 0 382 183 192 0 chr2 132775703 132775807 -117912047 - L2 LINE L2 0 3313 3190 483 326 49 22 chr2 132776122 132776306 -117911548 - LTR16B LTR ERVL -162 302 114 232 258 191 0 chr2 132776781 132776870 -117910984 - L2 LINE L2 -33 3280 3175 325 330 97 46 chr2 132777048 132777399 -117910455 - L2 LINE L2 -354 2960 2592 205 186 23 0 chr2 132778291 132778334 -117909520 + MIR3 SINE MIR 164 207 -1 1666 232 52 7 chr2 132778454 132778893 -117908961 + MLT1C LTR MaLR 9 467 0 691 311 104 49 chr2 132778996 132779126 -117908728 - L2 LINE L2 -20 3252 3131 1784 169 33 3 chr2 132779126 132779428 -117908426 + AluJo SINE Alu 1 311 -1 691 311 104 49 chr2 132779428 132779441 -117908413 - L2 LINE L2 -141 3131 3120 264 30 0 0 chr2 132779441 132779474 -117908380 + (CA)n Simple_repeat Simple_repeat 2 34 0 691 311 104 49 chr2 132779474 132780148 -117907706 - L2 LINE L2 -152 3120 2392 380 222 33 0 chr2 132780193 132780283 -117907571 - MLT1J LTR MaLR -41 470 378 424 261 18 9 chr2 132780380 132780491 -117907363 - MLT1J2 LTR MaLR -275 175 64 832 263 86 15 chr2 132780624 132780963 -117906891 - L2 LINE L2 -965 2349 1987 2080 119 0 0 chr2 132781114 132781391 -117906463 + AluSg SINE Alu 10 286 -24 180 0 0 0 chr2 132781397 132781417 -117906437 + (TTAAA)n Simple_repeat Simple_repeat 2 21 0 899 134 8 0 chr2 132781427 132781561 -117906293 - FRAM SINE Alu -41 135 1 513 330 17 11 chr2 132782977 132783153 -117904701 + MER115 DNA AcHobo 94 270 -423 334 358 25 31 chr2 132783277 132783439 -117904415 + MER115 DNA AcHobo 286 446 -247 23 78 0 0 chr2 132783982 132784033 -117903821 + AT_rich Low_complexity Low_complexity 1 51 0 198 0 0 0 chr2 132784095 132784117 -117903737 + (TTTCC)n Simple_repeat Simple_repeat 5 26 0 180 0 0 0 chr2 132786253 132786273 -117901581 + (TGG)n Simple_repeat Simple_repeat 1 20 0 370 320 0 33 chr2 132786592 132786742 -117901112 - L2 LINE L2 -5 3308 3164 1995 151 20 0 chr2 132786895 132787194 -117900660 - AluJo SINE Alu -3 309 5 1277 247 82 19 chr2 132787221 132787598 -117900256 - MLT1H LTR MaLR -20 529 129 345 273 0 0 chr2 132787690 132787756 -117900098 - L2 LINE L2 -56 3216 3151 187 297 90 27 chr2 132789021 132789132 -117898722 + L2 LINE L2 2903 3020 -252 2266 53 0 57 chr2 132789134 132789433 -117898421 + AluY SINE Alu 14 295 -16 1257 129 0 0 chr2 132789434 132789612 -117898242 + AluSg/x SINE Alu 133 310 0 207 0 0 0 chr2 132789783 132789806 -117898048 + (A)n Simple_repeat Simple_repeat 1 23 0 4298 138 53 46 chr2 132789939 132791269 -117896585 + pTR5 LTR ERV1 742 2438 0 244 182 18 36 chr2 132791292 132791347 -117896507 + L2 LINE L2 3219 3272 0 206 171 24 0 chr2 132791349 132791390 -117896464 + GA-rich Low_complexity Low_complexity 4 45 0 236 217 145 0 chr2 132792206 132792275 -117895579 - MIR SINE MIR -114 148 70 363 171 0 14 chr2 132792439 132792509 -117895345 + L2 LINE L2 3241 3309 -4 361 288 172 27 chr2 132792651 132793064 -117894790 - L1ME4a LINE L1 -94 6027 5555 222 265 98 29 chr2 132793100 132793202 -117894652 - MIR3 SINE MIR -16 192 84 670 296 126 43 chr2 132793508 132793783 -117894071 - L2 LINE L2 -20 3293 2966 2356 100 0 0 chr2 132793783 132794073 -117893781 + AluSc SINE Alu 1 290 -19 670 296 126 43 chr2 132794073 132794240 -117893614 - L2 LINE L2 -347 2966 2814 1144 284 47 13 chr2 132794328 132794800 -117893054 - L2 LINE L2 -1124 2190 1703 617 205 189 60 chr2 132794802 132794987 -117892867 + MER3 DNA MER1_type 1 209 0 2241 113 3 3 chr2 132795000 132795300 -117892554 - AluSg SINE Alu -9 301 2 506 297 117 22 chr2 132795663 132795885 -117891969 + MIR SINE MIR 2 244 -18 521 247 11 75 chr2 132797137 132797323 -117890531 + MLT1K LTR MaLR 393 566 -22 2276 104 0 3 chr2 132797357 132797654 -117890200 + AluSq SINE Alu 1 296 -17 229 213 120 13 chr2 132797779 132797854 -117890000 - LTR67 LTR ERVL -3 554 472 243 309 99 0 chr2 132798154 132798235 -117889619 - LTR67 LTR ERVL -140 417 329 2025 172 31 16 chr2 132798434 132798818 -117889036 + MLT1B LTR MaLR 1 390 0 854 278 85 41 chr2 132799268 132799657 -117888197 - MLT1I LTR MaLR -3 406 1 329 304 39 96 chr2 132800559 132800789 -117887065 + LTR67 LTR ERVL 2 218 -339 269 293 12 12 chr2 132800915 132800997 -117886857 + LTR67 LTR ERVL 424 505 -52 1138 218 28 8 chr2 132801002 132801254 -117886600 + MLT2D LTR ERVL 1 257 -157 2326 169 27 15 chr2 132801264 132801672 -117886182 + LTR3 LTR ERVK 5 417 -15 18876 119 17 4 chr2 132801693 132804456 -117883398 + HERVK3 LTR ERVK 2 2798 -4445 1393 79 0 0 chr2 132804456 132804634 -117883220 + HERVK3 LTR ERVK 4130 4307 -2936 * 4410 124 6 1 chr2 132804633 132805293 -117882561 + HERVK3 LTR ERVK 4685 5347 -1896 7168 101 16 0 chr2 132805296 132806261 -117881593 + HERVK3 LTR ERVK 6264 7243 0 2257 177 26 37 chr2 132806265 132806695 -117881159 + LTR3 LTR ERVK 5 429 -3 966 194 8 33 chr2 132806714 132806918 -117880936 + MLT2D LTR ERVL 240 412 -2 225 195 24 0 chr2 132806923 132806964 -117880890 + LTR67 LTR ERVL 509 550 -7 3331 150 20 41 chr2 132807205 132807838 -117880016 - L1MB2 LINE L1 0 6171 5552 360 214 54 62 chr2 132807882 132807994 -117879860 - MIR SINE MIR -74 188 78 2232 124 0 0 chr2 132807994 132808285 -117879569 - AluSg SINE Alu -19 291 1 22 35 0 0 chr2 132808445 132808474 -117879380 + AT_rich Low_complexity Low_complexity 1 29 0 407 186 107 69 chr2 132808682 132808842 -117879012 + MER20B DNA MER1_type 46 214 -5 279 157 0 0 chr2 132810565 132810616 -117877238 + GA-rich Low_complexity Low_complexity 3 53 0 2075 179 5 16 chr2 132811302 132811671 -117876183 - MLT1A1 LTR MaLR 0 365 1 23 0 0 0 chr2 132813621 132813644 -117874210 + AT_rich Low_complexity Low_complexity 1 23 0 199 282 0 56 chr2 132814027 132814098 -117873756 - L2 LINE L2 -92 3221 3155 1940 225 63 16 chr2 132814099 132814588 -117873266 + LTR33 LTR ERVL 1 512 -9 2934 262 201 18 chr2 132814592 132814617 -117873237 - L2 LINE L2 -157 3156 3137 369 0 0 0 chr2 132814617 132814658 -117873196 + (CA)n Simple_repeat Simple_repeat 2 42 0 2934 262 201 18 chr2 132814658 132815053 -117872801 - L2 LINE L2 -176 3137 2816 791 169 0 0 chr2 132815053 132815183 -117872671 - FLAM_A SINE Alu -3 130 1 2934 262 201 18 chr2 132815183 132815212 -117872642 - L2 LINE L2 -497 2816 2794 1790 167 7 10 chr2 132815212 132815500 -117872354 + AluJo SINE Alu 1 287 -25 2934 262 201 18 chr2 132815500 132816456 -117871398 - L2 LINE L2 -519 2794 2015 2673 149 14 2 chr2 132816456 132816879 -117870975 - MSTA LTR MaLR 0 428 1 2934 262 201 18 chr2 132816879 132817092 -117870762 - L2 LINE L2 -1298 2015 1225 209 346 56 37 chr2 132817394 132817501 -117870353 - L2 LINE L2 -42 3230 3122 2077 127 10 0 chr2 132818543 132818843 -117869011 + AluSq SINE Alu 6 308 -5 248 283 100 42 chr2 132819609 132819729 -117868125 - MIR SINE MIR -50 212 86 1447 168 67 97 chr2 132820419 132820823 -117867031 + MSTD LTR MaLR 1 392 -4 540 211 0 0 chr2 132822170 132822274 -117865580 - MIR SINE MIR -37 225 122 181 343 10 10 chr2 132822734 132822836 -117865018 + L2 LINE L2 2948 3049 -223 1938 168 3 16 chr2 132822899 132823234 -117864620 - AluJo SINE Alu 0 331 1 932 262 4 30 chr2 132823761 132824024 -117863830 + MIR SINE MIR 7 262 0 248 244 269 25 chr2 132824166 132824367 -117863487 + MIR SINE MIR 2 251 -11 2178 134 3 0 chr2 132824704 132825009 -117862845 + AluSx SINE Alu 1 306 -6 293 257 10 40 chr2 132825306 132825407 -117862447 - MIR3 SINE MIR -5 203 106 755 305 54 41 chr2 132826668 132827055 -117860799 - MLT1L LTR MaLR -4 611 220 217 325 0 0 chr2 132828635 132828712 -117859142 - MIR3 SINE MIR -7 201 125 939 343 36 8 chr2 132829334 132829693 -117858161 + LTR16A LTR ERVL 1 369 -81 1385 191 47 0 chr2 132829711 132829730 -117858124 - L1MC3 LINE L1 -1 7784 7767 2301 119 0 0 chr2 132829730 132830033 -117857821 + AluSg SINE Alu 1 303 -7 1385 191 47 0 chr2 132830033 132830312 -117857542 - L1MC3 LINE L1 -18 7767 7472 288 260 106 26 chr2 132830376 132830602 -117857252 + MLT1L LTR MaLR 12 284 -331 1265 199 67 15 chr2 132830897 132831188 -117856666 - AluJb SINE Alu 0 305 1 441 179 57 9 chr2 132831912 132832018 -117855836 + L1ME4a LINE L1 5794 5904 -217 4469 108 9 6 chr2 132832047 132832694 -117855160 - MER39B LTR ERV1 -1 652 4 2623 194 39 76 chr2 132832705 132833293 -117854561 + MLT2B3 LTR ERVL 1 515 0 292 198 123 0 chr2 132833506 132833587 -117854267 + MER63 DNA MER1_type 649 739 -321 593 174 8 16 chr2 132833931 132834052 -117853802 - MER5A DNA MER1_type -69 120 1 3693 122 13 6 chr2 132834223 132834746 -117853108 - MER1A DNA MER1_type 0 527 1 211 303 0 26 chr2 132835003 132835079 -117852775 + C-rich Low_complexity Low_complexity 5 78 0 1587 215 65 38 chr2 132835134 132835581 -117852273 - Charlie4a DNA MER1_type -33 475 17 290 152 51 51 chr2 132837089 132837168 -117850686 + MIR SINE MIR 103 181 -81 223 259 0 19 chr2 132838241 132838295 -117849559 + (CA)n Simple_repeat Simple_repeat 2 54 0 2321 96 0 3 chr2 132838840 132839131 -117848723 + AluSg SINE Alu 1 290 -20 35 0 0 40 chr2 132840190 132840223 -117847631 + AT_rich Low_complexity Low_complexity 1 33 -15 3287 119 14 4 chr2 132840223 132840729 -117847125 - L1PA16 LINE L1 0 6166 5656 35 0 0 40 chr2 132840729 132840745 -117847109 + AT_rich Low_complexity Low_complexity 33 48 0 877 143 121 22 chr2 132840745 132840927 -117846927 + L1MB5 LINE L1 5725 5924 -260 7156 58 10 2 chr2 132840927 132841957 -117845897 + L1PA8 LINE L1 5130 6168 -4 1142 188 4 41 chr2 132841957 132842198 -117845656 + L1MB5 LINE L1 5928 6163 -11 311 321 12 43 chr2 132842761 132842923 -117844931 + MER5A DNA MER1_type 32 188 -1 1884 107 110 0 chr2 132843901 132844164 -117843690 - AluSc SINE Alu -17 292 1 206 329 0 14 chr2 132844271 132844344 -117843510 + L2 LINE L2 3242 3313 0 2046 208 112 82 chr2 132844365 132845088 -117842766 + LTR1B LTR ERV1 1 745 -81 395 292 130 22 chr2 132845743 132845928 -117841926 + MIR SINE MIR 9 213 -49 2995 144 174 8 chr2 132846968 132847571 -117840283 + MER39 LTR ERV1 4 706 -1 2408 99 0 0 chr2 132847746 132848050 -117839804 - AluSg SINE Alu -6 304 1 550 99 0 12 chr2 132848083 132848164 -117839690 - MADE1 DNA Mariner 0 80 1 340 273 7 7 chr2 132848507 132848646 -117839208 + G-rich Low_complexity Low_complexity 4 142 0 26 0 0 0 chr2 132849300 132849326 -117838528 + AT_rich Low_complexity Low_complexity 1 26 0 613 207 185 31 chr2 132849455 132849677 -117838177 - MER112 DNA MER1_type 0 260 5 257 333 0 0 chr2 132849677 132849758 -117838096 - MIR SINE MIR -55 153 73 198 0 0 0 chr2 132850029 132850051 -117837803 + (A)n Simple_repeat Simple_repeat 1 22 0 188 271 0 43 chr2 132850138 132850208 -117837646 - MIR SINE MIR -24 238 172 1487 192 116 33 chr2 132850287 132850709 -117837145 + MSTB2 LTR MaLR 1 457 0 196 225 0 0 chr2 132850715 132850755 -117837099 - MIR SINE MIR -210 52 13 688 296 95 14 chr2 132852356 132852752 -117835102 - MLT1L LTR MaLR -11 604 110 235 265 15 44 chr2 132852709 132852777 -117835077 - LTR67 LTR ERVL -400 157 92 * 336 250 197 62 chr2 132853057 132853202 -117834652 - L1MA9 LINE L1 -38 6274 6150 1797 93 119 4 chr2 132853202 132853471 -117834383 + AluSq SINE Alu 1 300 -13 336 250 197 62 chr2 132853471 132853569 -117834285 - L1MA9 LINE L1 -162 6150 5998 2247 122 3 0 chr2 132853960 132854272 -117833582 - AluSq SINE Alu 0 313 1 198 217 193 0 chr2 132855160 132855243 -117832611 - MIR SINE MIR -44 218 120 475 286 45 7 chr2 132855970 132856124 -117831730 - MIR SINE MIR -75 187 28 2306 103 3 0 chr2 132858308 132858618 -117829236 + AluSq SINE Alu 1 311 -2 1592 171 39 46 chr2 132858625 132858930 -117828924 + AluJo SINE Alu 1 303 -9 354 253 12 40 chr2 132859264 132859400 -117828454 - MIR SINE MIR -41 167 34 423 0 0 0 chr2 132859430 132859477 -117828377 + (CA)n Simple_repeat Simple_repeat 2 48 0 198 0 0 0 chr2 132859486 132859508 -117828346 + (A)n Simple_repeat Simple_repeat 1 22 0 882 209 0 0 chr2 132859548 132859706 -117828148 + FRAM SINE Alu 4 161 -15 318 259 54 61 chr2 132859708 132859855 -117827999 - MIR SINE MIR -4 258 113 215 280 97 54 chr2 132859861 132859954 -117827900 + L2 LINE L2 3163 3259 -13 214 274 20 0 chr2 132860023 132860074 -117827780 + L2 LINE L2 3188 3239 -33 31 0 0 0 chr2 132860092 132860123 -117827731 + AT_rich Low_complexity Low_complexity 1 31 0 883 275 105 79 chr2 132860202 132860416 -117827438 - MLT1K LTR MaLR -2 586 379 2288 100 6 10 chr2 132860416 132860727 -117827127 - AluSg SINE Alu 0 310 1 883 275 105 79 chr2 132860727 132861083 -117826771 - MLT1K LTR MaLR -209 379 1 515 270 42 54 chr2 132862039 132862280 -117825574 + MER102a DNA MER1_type 93 330 0 221 306 0 0 chr2 132862283 132862345 -117825509 - MIR3 SINE MIR -53 155 94 1146 240 94 20 chr2 132862421 132862814 -117825040 - L1MD2 LINE L1 0 6164 5771 282 56 0 0 chr2 132862815 132862851 -117825003 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 296 200 0 0 chr2 132862858 132862908 -117824946 + MER63 DNA MER1_type 689 738 -322 1321 234 78 3 chr2 132862950 132863296 -117824558 - MER63 DNA MER1_type 0 1060 689 462 132 0 0 chr2 132863302 132863378 -117824476 + (TCCC)n Simple_repeat Simple_repeat 4 79 0 2635 130 58 12 chr2 132863755 132864187 -117823667 + LTR47A LTR ERVL 1 452 0 602 286 39 52 chr2 132864549 132864857 -117822997 + L2 LINE L2 2625 2928 -386 825 93 0 17 chr2 132864968 132865086 -117822768 + FRAM SINE Alu 60 175 -1 2612 147 22 16 chr2 132865168 132865618 -117822236 + L1MA5 LINE L1 5843 6295 -5 22 0 0 0 chr2 132865650 132865672 -117822182 + AT_rich Low_complexity Low_complexity 1 22 0 288 236 102 8 chr2 132865692 132865819 -117822035 - L1ME4a LINE L1 -17 6104 5966 881 138 39 0 chr2 132865834 132865964 -117821890 - AluJo SINE Alu -177 135 1 272 273 115 14 chr2 132866003 132866142 -117821712 - HAL1 LINE L1 0 2507 2355 * 6073 86 20 63 chr2 132866141 132866866 -117820988 - L1MA2 LINE L1 0 6304 5549 1875 171 0 9 chr2 132866866 132867181 -117820673 - AluJb SINE Alu 0 312 1 6073 86 20 63 chr2 132867181 132867321 -117820533 - L1MA2 LINE L1 -755 5549 5483 2508 61 0 0 chr2 132867321 132867615 -117820239 - AluY SINE Alu -17 294 1 6073 86 20 63 chr2 132867615 132867728 -117820126 - L1MA2 LINE L1 -821 5483 5367 5295 245 105 30 chr2 132867804 132869635 -117818219 - HAL1 LINE L1 -213 2294 257 258 32 0 0 chr2 132869635 132869666 -117818188 + (CA)n Simple_repeat Simple_repeat 1 31 0 5295 245 105 30 chr2 132869666 132869944 -117817910 - HAL1 LINE L1 -2250 257 1 546 215 47 40 chr2 132869953 132870102 -117817752 + L2 LINE L2 3123 3272 0 213 279 89 44 chr2 132870934 132871092 -117816762 - L2 LINE L2 -119 3194 3030 254 324 44 78 chr2 132871114 132871410 -117816444 + MLT1K LTR MaLR 20 305 -283 267 301 19 29 chr2 132871445 132871548 -117816306 + MLT1K LTR MaLR 470 571 -17 2333 75 3 0 chr2 132871578 132871871 -117815983 - AluY SINE Alu -17 294 1 380 299 147 41 chr2 132871871 132872294 -117815560 - L2 LINE L2 -237 3035 2565 2155 126 0 0 chr2 132872593 132872902 -117814952 + AluSx SINE Alu 1 309 -3 494 242 32 84 chr2 132873259 132873415 -117814439 + MLT1J2 LTR MaLR 250 394 -15 388 174 22 11 chr2 132873590 132873682 -117814172 + GA-rich Low_complexity Low_complexity 1 93 0 374 283 0 18 chr2 132873861 132873974 -117813880 + MIR3 SINE MIR 91 201 -7 375 134 12 73 chr2 132875038 132875120 -117812734 - L1MB8 LINE L1 -9 6169 6093 591 139 22 44 chr2 132875131 132875268 -117812586 - L1MB3 LINE L1 0 6183 6050 1185 284 69 43 chr2 132875548 132875967 -117811887 - LTR16A LTR ERVL -14 436 7 2999 331 64 16 chr2 132876633 132878127 -117809727 - ERVL LTR ERVL -1576 4188 2624 305 217 0 33 chr2 132928739 132928799 -117759055 - L2 LINE L2 0 3272 3215 261 234 21 21 chr2 132929467 132929561 -117758293 - L1ME4a LINE L1 -22 6099 6006 21 36 0 0 chr2 132930542 132930570 -117757284 + AT_rich Low_complexity Low_complexity 1 28 0 1215 190 9 18 chr2 132931382 132931603 -117756251 + MER20 DNA MER1_type 1 219 0 333 0 0 0 chr2 132931968 132932005 -117755849 + (TC)n Simple_repeat Simple_repeat 2 38 0 * 411 38 0 0 chr2 132932004 132932057 -117755797 + (TG)n Simple_repeat Simple_repeat 2 54 0 2404 70 3 3 chr2 132932976 132933277 -117754577 - AluY SINE Alu -10 301 1 358 293 34 34 chr2 132933402 132933549 -117754305 - MER5A DNA MER1_type 0 189 43 1568 149 61 13 chr2 132933575 132933950 -117753904 - L1MA9 LINE L1 -9 6303 5886 196 337 22 45 chr2 132934038 132934127 -117753727 + L2 LINE L2 3227 3313 0 1763 158 0 60 chr2 132934160 132934311 -117753543 + AluJo SINE Alu 1 125 -187 2238 111 0 0 chr2 132934311 132934599 -117753255 + AluSc SINE Alu 1 288 -21 1763 158 0 60 chr2 132934599 132934764 -117753090 + AluJo SINE Alu 125 298 -14 1408 180 3 25 chr2 132935101 132935385 -117752469 - L1MA10 LINE L1 -11 6323 6046 468 48 0 0 chr2 132935602 132935665 -117752189 + (TG)n Simple_repeat Simple_repeat 1 63 0 216 0 0 0 chr2 132935963 132935987 -117751867 + (CA)n Simple_repeat Simple_repeat 2 25 0 1004 171 99 48 chr2 132936065 132936204 -117751650 - L1MD3 LINE L1 0 7995 7865 1275 186 38 127 chr2 132936204 132936395 -117751459 + MER58B DNA MER1_type 1 145 -2275 1614 129 31 66 chr2 132936395 132936682 -117751172 + AluJo SINE Alu 13 289 -23 1275 186 38 127 chr2 132936682 132936861 -117750993 + MER58B DNA MER1_type 145 338 -3 1004 171 99 48 chr2 132936861 132936973 -117750881 - L1MD3 LINE L1 -130 7865 7731 1657 138 0 59 chr2 132938412 132938716 -117749138 + AluJo SINE Alu 11 296 -16 2077 118 21 0 chr2 132938932 132939221 -117748633 + AluSx SINE Alu 1 295 -17 275 216 0 40 chr2 132939744 132939818 -117748036 - MIR SINE MIR -77 185 115 324 329 29 22 chr2 132940618 132940755 -117747099 + MIR3 SINE MIR 37 174 -34 265 271 35 0 chr2 132941282 132941367 -117746487 + (TA)n Simple_repeat Simple_repeat 1 88 0 460 204 189 8 chr2 132941646 132941778 -117746076 + MER5A DNA MER1_type 6 161 -28 301 301 82 39 chr2 132942405 132942611 -117745243 + L2 LINE L2 3098 3312 -1 629 222 176 0 chr2 132942798 132942974 -117744880 - MIR SINE MIR -38 224 18 828 150 24 0 chr2 132943961 132944088 -117743766 + FLAM_C SINE Alu 3 132 -11 442 191 0 0 chr2 132944795 132944863 -117742991 + AluJ/FLAM SINE Alu 2 69 -243 2229 88 3 17 chr2 132945025 132945321 -117742533 - AluSx SINE Alu -20 292 1 1305 136 11 0 chr2 132947385 132947576 -117740278 - AluSg/x SINE Alu -12 300 108 1902 149 10 0 chr2 132947577 132947873 -117739981 - AluJo SINE Alu -13 299 1 217 286 24 0 chr2 132949005 132949089 -117738765 + (CATA)n Simple_repeat Simple_repeat 2 87 0 245 155 0 0 chr2 132949095 132949153 -117738701 + LTR66 LTR ERVL 394 451 -159 191 301 214 0 chr2 132950006 132950109 -117737745 - L2 LINE L2 -2 3270 3146 2379 103 3 0 chr2 132950632 132950944 -117736910 - AluSq SINE Alu 0 313 1 228 347 40 0 chr2 132951001 132951076 -117736778 - L1M4 LINE L1 -483 5695 5618 349 329 36 0 chr2 132951132 132951269 -117736585 - L1M4 LINE L1 -595 5526 5385 512 240 33 82 chr2 132952735 132952918 -117734936 - MER5B DNA MER1_type -2 176 3 774 170 8 106 chr2 132952988 132953094 -117734760 + MER5A DNA MER1_type 4 79 -110 2171 110 3 0 chr2 132953094 132953385 -117734469 + AluSx SINE Alu 1 292 -20 774 170 8 106 chr2 132953385 132953487 -117734367 + MER5A DNA MER1_type 79 189 0 1303 150 4 61 chr2 132953617 132953863 -117733991 - AluJo SINE Alu -19 293 62 1720 150 70 7 chr2 132954589 132954876 -117732978 + AluJo SINE Alu 1 305 -7 252 323 0 20 chr2 132954931 132955030 -117732824 + MER5A DNA MER1_type 8 104 -85 231 261 0 187 chr2 132954957 132955050 -117732804 - MER5A DNA MER1_type -22 167 131 * 2918 47 6 0 chr2 132955050 132955389 -117732465 - L1PA8 LINE L1 -8 6164 5824 231 261 0 187 chr2 132955389 132955498 -117732356 - MER5A DNA MER1_type -58 131 3 292 265 44 73 chr2 132956179 132956383 -117731471 + L1MC4 LINE L1 7844 8041 -1 391 77 0 0 chr2 132956458 132956510 -117731344 + MADE1 DNA Mariner 29 80 0 303 294 85 39 chr2 132957244 132957397 -117730457 - MIR3 SINE MIR -7 201 42 198 0 0 0 chr2 132957481 132957503 -117730351 + (A)n Simple_repeat Simple_repeat 1 22 0 533 174 174 55 chr2 132957510 132957792 -117730062 - MLT1H1 LTR MaLR 0 555 257 226 297 27 36 chr2 132957798 132957909 -117729945 - L2 LINE L2 -245 3027 2918 2350 95 0 0 chr2 132958020 132958315 -117729539 + AluSx SINE Alu 1 295 -17 432 333 78 30 chr2 132958683 132959080 -117728774 - L2 LINE L2 -671 2643 2228 1685 136 20 53 chr2 132959122 132959269 -117728585 + AluJo SINE Alu 1 134 -178 2321 103 0 3 chr2 132959269 132959569 -117728285 + AluSx SINE Alu 1 299 -13 1685 136 20 53 chr2 132959569 132959722 -117728132 + AluJo SINE Alu 134 291 -21 25 0 0 0 chr2 132959722 132959747 -117728107 + AT_rich Low_complexity Low_complexity 1 25 0 556 229 26 46 chr2 132960075 132960228 -117727626 - MER5A DNA MER1_type -3 186 37 282 242 32 89 chr2 132960256 132960380 -117727474 + MIR SINE MIR 105 221 -41 886 214 0 0 chr2 132960422 132960581 -117727273 - MER5A DNA MER1_type -21 168 10 814 262 241 35 chr2 132960718 132960949 -117726905 - L2 LINE L2 0 3313 3131 1945 129 61 0 chr2 132960949 132961229 -117726625 - AluJb SINE Alu -15 297 1 814 262 241 35 chr2 132961229 132961420 -117726434 - L2 LINE L2 -182 3131 2804 429 196 216 34 chr2 132961489 132961637 -117726217 - MER5A DNA MER1_type -6 183 9 2336 93 7 0 chr2 132963207 132963509 -117724345 + AluSp SINE Alu 1 304 -9 472 307 48 0 chr2 132964685 132964851 -117723003 - MIR SINE MIR -71 191 18 797 209 0 47 chr2 132965524 132965696 -117722158 + FRAM SINE Alu 1 164 -12 560 246 94 18 chr2 132965723 132965894 -117721960 + MIR SINE MIR 2 185 -77 372 276 0 0 chr2 132966032 132966130 -117721724 + MIR SINE MIR 165 262 0 386 175 60 10 chr2 132966310 132966409 -117721445 - MLT1G1 LTR MaLR 0 549 448 1038 270 86 9 chr2 132966444 132966806 -117721048 - MLT1G1 LTR MaLR -196 349 1 2035 116 3 7 chr2 132967030 132967314 -117720540 + AluSx SINE Alu 1 283 -29 312 27 0 0 chr2 132967314 132967351 -117720503 + (CATA)n Simple_repeat Simple_repeat 4 40 0 793 244 34 19 chr2 132968896 132969101 -117718753 - MIR SINE MIR -1 261 54 959 110 17 64 chr2 132969168 132969284 -117718570 - MER5A DNA MER1_type -24 165 58 2244 115 28 52 chr2 132969284 132969684 -117718170 - MLT1B LTR MaLR 0 390 1 959 110 17 64 chr2 132969684 132969740 -117718114 - MER5A DNA MER1_type -131 58 1 2855 24 0 0 chr2 132969809 132970140 -117717714 - L1PA4 LINE L1 0 6155 5825 233 298 170 0 chr2 132970140 132970234 -117717620 - MIR SINE MIR -61 147 78 877 282 106 48 chr2 132970235 132970813 -117717041 + MLT1L LTR MaLR 1 611 -4 1069 201 46 8 chr2 132970948 132971211 -117716643 + L1MB2 LINE L1 5892 6164 -7 1231 260 80 27 chr2 132971298 132971710 -117716144 + L2 LINE L2 2880 3313 0 2133 142 0 7 chr2 132971719 132972028 -117715826 + AluSx SINE Alu 1 307 -5 662 243 10 20 chr2 132972186 132972388 -117715466 + HAL1 LINE L1 119 318 -2189 2263 202 58 78 chr2 132972603 132972811 -117715043 + HAL1 LINE L1 604 815 -1692 2566 60 0 0 chr2 132972811 132973110 -117714744 - AluY SINE Alu -12 299 1 2263 202 58 78 chr2 132973110 132973812 -117714042 + HAL1 LINE L1 815 1496 -1011 916 123 7 7 chr2 132973813 132973951 -117713903 + AluJb SINE Alu 1 138 -174 892 297 70 48 chr2 132974029 132974139 -117713715 + HERV16 LTR ERVL 2074 2180 -2816 2275 194 64 80 chr2 132974139 132974266 -117713588 - REP3 LTR ERV -3 559 431 1548 134 0 0 chr2 132974266 132974483 -117713371 + AluJb SINE Alu 85 301 -11 2194 104 7 13 chr2 132974483 132974792 -117713062 + AluSx SINE Alu 1 307 -5 2275 194 64 80 chr2 132974792 132975229 -117712625 - REP3 LTR ERV -129 433 3 892 297 70 48 chr2 132975229 132975616 -117712238 + HERV16 LTR ERVL 2180 2582 -2414 404 239 137 27 chr2 132975965 132976151 -117711703 + MLT1I LTR MaLR 64 269 -140 243 294 118 12 chr2 132976156 132976241 -117711613 + L2 LINE L2 3169 3262 -10 257 218 89 59 chr2 132979877 132979978 -117707876 - MIR SINE MIR -134 128 25 2025 125 3 7 chr2 132980168 132980471 -117707383 - AluSx SINE Alu -10 302 1 1628 156 16 0 chr2 132980859 132981109 -117706745 + AluJb SINE Alu 43 296 -16 1373 118 72 9 chr2 132981166 132981387 -117706467 - MER46A DNA MER2_type 0 236 2 476 277 67 40 chr2 132982662 132982915 -117704939 - MLT1K LTR MaLR -106 482 223 578 311 80 24 chr2 132983044 132983295 -117704559 - L2 LINE L2 -590 2724 2460 23 33 0 0 chr2 132983369 132983399 -117704455 + AT_rich Low_complexity Low_complexity 1 30 0 684 198 165 22 chr2 132983932 132984114 -117703740 - MER3 DNA MER1_type 0 209 2 304 273 72 43 chr2 132984249 132984388 -117703466 - MIR SINE MIR -55 207 65 2289 112 0 6 chr2 132984608 132984922 -117702932 - AluSx SINE Alu 0 312 1 523 315 77 5 chr2 132985416 132985638 -117702216 + MIR SINE MIR 13 250 -12 1065 120 67 43 chr2 132985923 132986131 -117701723 - MER46A DNA MER2_type 0 236 24 1267 164 0 0 chr2 132986815 132987010 -117700844 - AluSg/x SINE Alu -10 302 108 1414 142 161 11 chr2 132987012 132987273 -117700581 - AluY SINE Alu -11 300 1 2418 88 0 3 chr2 132987417 132987722 -117700132 - AluY SINE Alu -7 304 1 355 264 96 51 chr2 132987762 132987940 -117699914 - L1ME LINE L1 -629 5492 5307 244 165 51 38 chr2 132988308 132988387 -117699467 + L1MC5 LINE L1 7835 7914 -47 1079 232 15 57 chr2 132988411 132988674 -117699180 - MER82 DNA MER2_type -1 652 401 12148 142 30 12 chr2 132988732 132988893 -117698961 - L1MA2 LINE L1 -5 6299 6142 1529 150 42 59 chr2 132988893 132989200 -117698654 - AluJo SINE Alu -3 309 8 12148 142 30 12 chr2 132989200 132992497 -117695357 - L1MA2 LINE L1 -162 6142 2778 1002 191 12 0 chr2 132992512 132992685 -117695169 - FAM SINE Alu 0 175 1 1675 214 16 5 chr2 132992686 132993056 -117694798 - MER82 DNA MER2_type -278 375 2 440 266 65 26 chr2 132993614 132993768 -117694086 - L1ME LINE L1 -460 5661 5502 1635 156 164 32 chr2 132993771 132993818 -117694036 + MSTC LTR MaLR 1 40 -388 2180 128 0 3 chr2 132993818 132994122 -117693732 + AluSx SINE Alu 1 303 -9 1635 156 164 32 chr2 132994122 132994452 -117693402 + MSTC LTR MaLR 40 428 0 2152 127 0 13 chr2 132994504 132994804 -117693050 - AluSx SINE Alu -16 296 1 1794 142 27 8 chr2 132995965 132996257 -117691597 + AluSx SINE Alu 18 314 0 363 268 47 100 chr2 132997023 132997403 -117690451 - L1ME LINE L1 -453 5668 5309 2328 114 0 0 chr2 132997915 132998223 -117689631 - AluSx SINE Alu -4 308 1 425 237 169 21 chr2 132998430 132998666 -117689188 - L1ME4a LINE L1 0 6121 5851 2222 117 0 3 chr2 132998801 132999100 -117688754 + AluSx SINE Alu 1 298 -14 2380 84 0 0 chr2 132999110 132999407 -117688447 + AluSq SINE Alu 1 297 -16 359 304 68 19 chr2 132999492 132999640 -117688214 - MIR SINE MIR -54 154 6 221 293 17 0 chr2 133002303 133002361 -117685493 - L3 LINE CR1 0 1577 1519 196 195 24 0 chr2 133002772 133002813 -117685041 + L3 LINE CR1 184 225 -1352 2353 83 13 10 chr2 133003349 133003661 -117684193 - AluSp SINE Alu 0 313 1 41 58 0 0 chr2 133004840 133004909 -117682945 + AT_rich Low_complexity Low_complexity 1 69 0 1618 167 10 50 chr2 133005109 133005253 -117682601 + AluJb SINE Alu 1 128 -184 2290 70 31 0 chr2 133005253 133005539 -117682315 + AluY SINE Alu 1 295 -16 1618 167 10 50 chr2 133005539 133005694 -117682160 + AluJb SINE Alu 128 288 -24 2089 130 0 3 chr2 133005706 133006005 -117681849 + AluSx SINE Alu 1 298 -14 1480 220 16 67 chr2 133006120 133006611 -117681243 + MER31B LTR ERV1 1 543 0 1605 141 116 14 chr2 133006812 133007089 -117680765 + AluJb SINE Alu 1 305 -7 22 0 0 0 chr2 133008041 133008063 -117679791 + AT_rich Low_complexity Low_complexity 1 22 0 217 246 0 35 chr2 133008320 133008377 -117679477 - MIR SINE MIR -70 192 138 194 85 0 64 chr2 133008417 133008464 -117679390 + (T)n Simple_repeat Simple_repeat 1 44 0 189 289 19 0 chr2 133008465 133008517 -117679337 - MIR SINE MIR -123 139 87 924 135 23 0 chr2 133008707 133008840 -117679014 + AluJb SINE Alu 1 136 -176 33 0 0 0 chr2 133008840 133008873 -117678981 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr2 133008882 133008910 -117678944 + AT_rich Low_complexity Low_complexity 1 28 0 4011 132 71 12 chr2 133009733 133010483 -117677371 + L1MA6 LINE L1 5507 6300 0 2140 98 0 11 chr2 133010514 133010801 -117677053 - AluSq SINE Alu -29 284 1 25 31 0 0 chr2 133013661 133013693 -117674161 + AT_rich Low_complexity Low_complexity 1 32 0 2034 116 3 45 chr2 133013868 133014179 -117673675 - AluSx SINE Alu -14 298 1 207 271 14 14 chr2 133014230 133014300 -117673554 - L2 LINE L2 -2 3270 3201 193 339 46 0 chr2 133014601 133014666 -117673188 + L3 LINE CR1 618 685 -892 567 256 40 34 chr2 133015094 133015270 -117672584 + MIR SINE MIR 73 249 -13 2201 115 0 10 chr2 133015324 133015637 -117672217 - AluSx SINE Alu 0 312 3 192 324 0 0 chr2 133016002 133016070 -117671784 + A-rich Low_complexity Low_complexity 3 70 0 1335 136 15 5 chr2 133016113 133016319 -117671535 + AluJb SINE Alu 30 237 -75 577 285 11 21 chr2 133016677 133016863 -117670991 + Charlie7 DNA MER1_type 94 277 -2335 189 214 0 0 chr2 133016867 133016909 -117670945 + CT-rich Low_complexity Low_complexity 5 46 0 2256 98 0 3 chr2 133017740 133018035 -117669819 + AluSx SINE Alu 1 294 -18 677 235 84 63 chr2 133019911 133020367 -117667487 - MLT1H LTR MaLR 0 549 1 26546 41 5 0 chr2 133020502 133024572 -117663282 - L1PA5 LINE L1 -1 6153 2070 7629 78 3 7 chr2 133024568 133025612 -117662242 + L1PA5 LINE L1 1046 2085 -4061 * 1665 139 0 0 chr2 133025839 133026076 -117661778 + AluSx SINE Alu 61 297 -15 981 199 0 0 chr2 133026600 133026771 -117661083 + FRAM SINE Alu 1 163 -13 21 36 0 0 chr2 133026864 133026892 -117660962 + AT_rich Low_complexity Low_complexity 1 28 0 225 286 0 39 chr2 133027004 133027081 -117660773 - L2 LINE L2 0 3272 3199 2225 80 0 10 chr2 133027542 133027853 -117660001 - AluY SINE Alu 0 308 1 2026 123 17 0 chr2 133028079 133028371 -117659483 + AluSg SINE Alu 1 297 -13 1958 148 7 0 chr2 133028518 133028822 -117659032 - AluJb SINE Alu -1 311 6 279 203 14 54 chr2 133028927 133029001 -117658853 - MIR SINE MIR -56 206 136 648 145 57 113 chr2 133029389 133029671 -117658183 - Charlie1b DNA MER1_type 0 523 258 248 132 0 0 chr2 133029668 133029706 -117658148 - tRNA-Ser-AGC tRNA tRNA -47 38 1 * 860 233 92 12 chr2 133029712 133029961 -117657893 - Charlie1b DNA MER1_type -253 270 2 213 94 0 0 chr2 133030289 133030321 -117657533 + (T)n Simple_repeat Simple_repeat 1 32 0 1868 169 0 3 chr2 133031633 133031928 -117655926 + AluJo SINE Alu 6 299 -13 248 232 29 14 chr2 133033570 133033639 -117654215 - MER113 DNA MER1_type? 0 521 452 293 222 111 0 chr2 133033711 133033828 -117654026 - MER113 DNA MER1_type? -391 130 1 1415 112 137 13 chr2 133034271 133034504 -117653350 + AluSg SINE Alu 45 306 -4 1466 85 0 16 chr2 133034518 133034706 -117653148 + AluSx SINE Alu 1 185 -127 358 111 48 0 chr2 133034707 133034770 -117653084 + AluSx SINE Alu 233 298 -2 234 229 131 16 chr2 133035512 133035573 -117652281 + L2 LINE L2 3244 3311 -2 1773 108 0 0 chr2 133036975 133037206 -117650648 + AluSq SINE Alu 1 231 -82 21 0 0 0 chr2 133037864 133037885 -117649969 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 9 0 chr2 133038800 133038860 -117648994 + AT_rich Low_complexity Low_complexity 1 22 0 1929 113 8 0 chr2 133039164 133039430 -117648424 - AluSp SINE Alu -45 268 1 2248 101 0 0 chr2 133039578 133039876 -117647978 + AluSg SINE Alu 1 298 -12 27 29 0 0 chr2 133039928 133039962 -117647892 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr2 133040211 133040234 -117647620 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 133041020 133041046 -117646808 + AT_rich Low_complexity Low_complexity 1 26 0 575 244 167 6 chr2 133041337 133041493 -117646361 - MER5A DNA MER1_type 0 189 9 655 213 35 30 chr2 133042888 133043057 -117644797 + MIR SINE MIR 1 170 -92 2207 107 3 0 chr2 133043662 133043953 -117643901 + AluSx SINE Alu 1 292 -20 187 191 32 0 chr2 133044610 133044673 -117643181 + (TA)n Simple_repeat Simple_repeat 1 65 0 2157 110 0 13 chr2 133044774 133045082 -117642772 + AluSg SINE Alu 1 304 -6 1818 155 10 16 chr2 133045217 133045520 -117642334 + AluJb SINE Alu 1 301 -11 524 247 103 11 chr2 133045620 133045794 -117642060 - L1MC5 LINE L1 -46 7915 7726 1685 118 141 0 chr2 133045806 133046076 -117641778 - AluSx SINE Alu -2 310 3 817 82 0 0 chr2 133046782 133046892 -117640962 - L1PA8 LINE L1 -9 6163 6054 1680 188 3 7 chr2 133047406 133047709 -117640145 + AluJo SINE Alu 1 302 -10 21 57 0 0 chr2 133047861 133047896 -117639958 + AT_rich Low_complexity Low_complexity 1 35 0 2388 81 0 3 chr2 133049219 133049517 -117638337 - AluSq SINE Alu -16 297 1 24 0 0 0 chr2 133049525 133049549 -117638305 + AT_rich Low_complexity Low_complexity 1 24 0 356 158 5 13 chr2 133049966 133050188 -117637666 + AluJo SINE Alu 1 296 -6 245 206 39 39 chr2 133050217 133050319 -117637535 + L1MB3 LINE L1 5814 5915 -206 734 185 51 82 chr2 133050905 133051100 -117636754 - MER5A DNA MER1_type 0 189 1 21 0 0 0 chr2 133051126 133051147 -117636707 + AT_rich Low_complexity Low_complexity 1 21 0 3454 179 110 15 chr2 133052400 133052950 -117634904 + L1MA6 LINE L1 4889 5385 -927 1061 145 58 87 chr2 133052950 133053191 -117634663 - MER46A DNA MER2_type -1 235 2 3454 179 110 15 chr2 133053191 133053645 -117634209 + L1MA6 LINE L1 5385 6312 0 3767 55 12 6 chr2 133053687 133054176 -117633678 - L1PA10 LINE L1 -2 6166 5675 2656 63 3 16 chr2 133054176 133054540 -117633314 + L1P4 LINE L1 5258 5616 -552 541 214 35 0 chr2 133054750 133054873 -117632981 + L1MB3 LINE L1 6025 6162 -21 302 298 70 44 chr2 133054924 133055082 -117632772 - L1MC4a LINE L1 -1777 6031 5870 241 310 18 18 chr2 133055127 133055240 -117632614 - L1MC4a LINE L1 -1940 5868 5756 387 127 0 0 chr2 133055864 133055927 -117631927 + Alu SINE Alu 240 302 0 22 0 0 0 chr2 133057404 133057426 -117630428 + AT_rich Low_complexity Low_complexity 1 22 0 824 179 7 0 chr2 133057454 133057594 -117630260 - AluJb SINE Alu -171 141 1 2093 102 17 7 chr2 133057599 133057893 -117629961 - AluSx SINE Alu -15 297 1 380 264 25 0 chr2 133058081 133058202 -117629652 - L1M4 LINE L1 -1538 4608 4485 1568 163 22 22 chr2 133058525 133058802 -117629052 - AluJb SINE Alu -35 277 1 469 186 109 45 chr2 133059309 133059465 -117628389 + LTR45B LTR ERV1 324 489 0 1222 29 0 7 chr2 133059547 133059686 -117628168 - AluY SINE Alu -173 138 1 592 241 202 20 chr2 133059807 133060010 -117627844 + MIR SINE MIR 6 245 -17 259 268 108 52 chr2 133060022 133060158 -117627696 - L1M4 LINE L1 -1985 4161 4034 1677 151 21 28 chr2 133060158 133060486 -117627368 - AluJb SINE Alu 0 326 1 259 268 108 52 chr2 133060486 133060598 -117627256 - L1M4 LINE L1 -2112 4034 3898 1025 210 25 0 chr2 133060708 133060908 -117626946 + AluJo SINE Alu 88 292 -20 28 79 0 0 chr2 133060909 133060972 -117626882 + AT_rich Low_complexity Low_complexity 1 63 0 2089 211 104 2 chr2 133060974 133061482 -117626372 - L1ME1 LINE L1 -4 6162 5603 1439 124 50 121 chr2 133061483 133061846 -117626008 - MLT1A1 LTR MaLR 0 365 29 677 153 76 15 chr2 133061846 133061977 -117625877 - L1PA15 LINE L1 -5 6160 6022 4672 103 21 3 chr2 133062030 133062727 -117625127 - L1PA15 LINE L1 -131 6034 5325 246 32 0 0 chr2 133062732 133062763 -117625091 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 1044 86 0 0 chr2 133062763 133062891 -117624963 - AluSq/x SINE Alu -184 128 1 794 203 99 116 chr2 133063374 133063847 -117624007 - MER4C LTR ERV1 0 465 1 2202 99 35 0 chr2 133065611 133065894 -117621960 + AluSq SINE Alu 1 293 -20 297 0 0 0 chr2 133066080 133066113 -117621741 + (CA)n Simple_repeat Simple_repeat 2 34 0 2182 122 0 22 chr2 133066167 133066486 -117621368 - AluSx SINE Alu 0 312 1 226 304 210 22 chr2 133066523 133066704 -117621150 + MIR SINE MIR 34 248 -14 1939 138 17 0 chr2 133066748 133067039 -117620815 - AluJb SINE Alu -12 300 5 2469 94 0 0 chr2 133067520 133067828 -117620026 - AluSx SINE Alu -4 308 1 428 284 66 16 chr2 133067917 133068100 -117619754 + L1ME LINE L1 5460 5651 -470 870 143 0 90 chr2 133068101 133068290 -117619564 + FRAM SINE Alu 1 170 -6 463 205 106 31 chr2 133068292 133068453 -117619401 + L1ME LINE L1 5647 5819 -302 5234 175 69 21 chr2 133068461 133068634 -117619220 - Tigger6a DNA MER2_type -514 1083 920 2495 68 0 7 chr2 133068634 133068941 -117618913 + AluY SINE Alu 1 305 -6 5234 175 69 21 chr2 133068941 133069094 -117618760 - Tigger6a DNA MER2_type -677 920 776 723 194 0 0 chr2 133069094 133069218 -117618636 - FLAM_A SINE Alu -9 124 1 5234 175 69 21 chr2 133069218 133069923 -117617931 - Tigger6a DNA MER2_type -821 776 2 1452 275 90 13 chr2 133069958 133070435 -117617419 + LTR33 LTR ERVL 1 514 -7 2010 99 4 0 chr2 133070668 133070921 -117616933 - AluSp SINE Alu -18 295 42 1861 136 51 14 chr2 133071039 133071333 -117616521 + AluJo SINE Alu 1 305 -7 219 36 0 0 chr2 133071769 133071797 -117616057 + (TTTTTA)n Simple_repeat Simple_repeat 3 30 0 2372 141 67 10 chr2 133071968 133072371 -117615483 - MSTB LTR MaLR 0 426 1 1564 293 100 64 chr2 133072564 133072939 -117614915 + HERVL LTR ERVL 3051 3411 -2243 1900 150 7 7 chr2 133072939 133073233 -117614621 + AluSx SINE Alu 1 294 -18 1564 293 100 64 chr2 133073233 133073989 -117613865 + HERVL LTR ERVL 3411 4222 -1432 1656 106 35 0 chr2 133073989 133074216 -117613638 - LTR12 LTR ERV1 0 714 480 302 235 20 20 chr2 133074216 133074318 -117613536 - LTR30 LTR ERV1 -79 643 542 881 53 29 0 chr2 133074318 133074445 -117613409 - LTR12 LTR ERV1 -421 2017 167 225 269 0 0 chr2 133074445 133074497 -117613357 - LTR30 LTR ERV1 -670 52 1 456 312 32 0 chr2 133074500 133074654 -117613200 + HERVL LTR ERVL 4261 4419 -1345 1997 102 195 7 chr2 133074656 133075070 -117612784 + LTR14B LTR ERVK 1 608 0 2681 201 105 6 chr2 133075226 133075852 -117612002 + MER76 LTR ERV 1 688 0 1837 68 107 46 chr2 133076025 133076305 -117611549 + AluSx SINE Alu 1 297 -15 1139 127 6 0 chr2 133076307 133076465 -117611389 + AluSp SINE Alu 136 294 -19 949 343 50 13 chr2 133076486 133077023 -117610831 + HERVL LTR ERVL 4770 5326 -438 1128 258 35 12 chr2 133077247 133077594 -117610260 + LTR16A LTR ERVL 72 420 -30 2519 59 0 13 chr2 133077924 133078227 -117609627 + AluY SINE Alu 1 299 -12 2201 129 7 0 chr2 133078390 133078700 -117609154 - AluSx SINE Alu 0 312 1 279 210 121 24 chr2 133078743 133078867 -117608987 + L1ME4a LINE L1 5975 6110 -11 510 197 82 16 chr2 133079891 133080013 -117607841 + L2 LINE L2 3183 3312 -1 451 282 146 0 chr2 133080173 133080351 -117607503 + L1ME LINE L1 5536 5749 -372 297 0 0 0 chr2 133080351 133080384 -117607470 + (CCTAA)n Simple_repeat Simple_repeat 3 35 0 451 282 146 0 chr2 133080384 133080411 -117607443 + L1ME LINE L1 5749 5771 -350 335 211 73 0 chr2 133080648 133080771 -117607083 - Charlie2a DNA MER1_type -1510 1352 1221 1946 209 98 4 chr2 133080779 133081248 -117606606 - MLT2B1 LTR ERVL 0 520 8 411 21 0 0 chr2 133081250 133081298 -117606556 + (TG)n Simple_repeat Simple_repeat 1 48 0 1332 180 89 99 chr2 133081298 133081523 -117606331 - Charlie2a DNA MER1_type -1680 1182 956 2186 138 0 6 chr2 133081523 133081834 -117606020 + AluJb SINE Alu 1 309 -3 1332 180 89 99 chr2 133081834 133082103 -117605751 - Charlie2a DNA MER1_type -1906 956 693 272 221 78 0 chr2 133082103 133082180 -117605674 + L1MC5 LINE L1 7697 7779 -182 552 136 11 0 chr2 133082203 133082291 -117605563 + L1MC3 LINE L1 7325 7413 -372 1320 214 31 6 chr2 133082293 133082615 -117605239 + L1MC3 LINE L1 7455 7784 -1 1615 165 103 0 chr2 133082626 133082898 -117604956 + AluJb SINE Alu 1 300 -12 2023 127 42 0 chr2 133082905 133083189 -117604665 + AluJb SINE Alu 7 302 -10 641 152 103 91 chr2 133083200 133083365 -117604489 - MER68 LTR ERV1 -372 190 24 228 244 0 0 chr2 133083674 133083719 -117604135 + GA-rich Low_complexity Low_complexity 3 47 0 183 264 0 0 chr2 133083788 133083841 -117604013 - L2 LINE L2 -971 2343 2291 2338 101 3 0 chr2 133083893 133084199 -117603655 - AluSx SINE Alu -5 307 1 2520 68 7 3 chr2 133084215 133084524 -117603330 - AluY SINE Alu -1 310 1 2036 111 3 66 chr2 133084698 133085031 -117602823 + AluSx SINE Alu 1 312 0 602 195 0 0 chr2 133085092 133085205 -117602649 + FLAM_A SINE Alu 26 138 -4 266 345 96 13 chr2 133085265 133085494 -117602360 - L2 LINE L2 -1039 2275 2028 2139 125 0 3 chr2 133085563 133085874 -117601980 + AluSx SINE Alu 1 310 -2 1962 126 3 3 chr2 133085920 133086222 -117601632 - AluSx SINE Alu -10 302 1 2303 144 54 34 chr2 133087667 133087787 -117600067 - L1MB3 LINE L1 -1 6182 6066 2109 90 24 0 chr2 133087787 133088075 -117599779 - AluSp SINE Alu -18 295 1 2303 144 54 34 chr2 133088075 133088346 -117599508 - L1MB3 LINE L1 -117 6066 5778 1017 142 151 19 chr2 133088346 133088551 -117599303 - MER46A DNA MER2_type -4 232 1 2303 144 54 34 chr2 133088551 133088624 -117599230 - L1MB3 LINE L1 -405 5778 5708 297 53 0 0 chr2 133088625 133088663 -117599191 - L1MB3 LINE L1 -442 5741 5704 1506 92 88 36 chr2 133089918 133090168 -117597686 - THE1B LTR MaLR -101 263 1 2289 88 0 13 chr2 133090667 133091000 -117596854 - AluSx SINE Alu 0 312 1 1973 157 0 20 chr2 133092111 133092417 -117595437 + AluJb SINE Alu 1 300 -12 382 291 9 9 chr2 133092971 133093081 -117594773 + MIR SINE MIR 33 142 -66 2265 110 0 3 chr2 133093742 133094043 -117593811 - AluSc SINE Alu -9 300 1 2493 62 10 3 chr2 133095109 133095418 -117592436 - AluY SINE Alu 0 311 1 232 251 90 67 chr2 133095804 133096027 -117591827 + L1MC4 LINE L1 7691 7918 -124 1027 228 9 0 chr2 133097049 133097260 -117590594 - AluJo SINE Alu -15 297 85 1402 146 71 7 chr2 133098264 133098545 -117589309 + L1MB4 LINE L1 5876 6174 -6 499 184 35 26 chr2 133098692 133098806 -117589048 - FLAM_A SINE Alu -20 122 8 2244 99 0 0 chr2 133099024 133099335 -117588519 - AluSx SINE Alu 0 311 1 351 0 0 0 chr2 133099401 133099440 -117588414 + (TTTTG)n Simple_repeat Simple_repeat 4 42 0 1361 144 27 97 chr2 133099440 133099738 -117588116 - AluJb SINE Alu -35 277 1 66 80 0 0 chr2 133100794 133100944 -117586910 + AT_rich Low_complexity Low_complexity 1 150 0 259 265 68 53 chr2 133101101 133101233 -117586621 - L1MB3 LINE L1 -395 5726 5593 2501 62 0 13 chr2 133101248 133101552 -117586302 + AluY SINE Alu 1 300 -11 1481 203 90 56 chr2 133102186 133102630 -117585224 - L1MB3 LINE L1 -1888 4258 3800 2267 82 0 7 chr2 133102730 133103011 -117584843 + AluY SINE Alu 1 279 -32 185 81 0 27 chr2 133103011 133103048 -117584806 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 2309 95 0 7 chr2 133103060 133103354 -117584500 + AluSx SINE Alu 1 292 -20 1293 118 11 0 chr2 133103379 133103557 -117584297 + AluSc SINE Alu 117 296 -13 2124 118 7 10 chr2 133103971 133104276 -117583578 + AluSx SINE Alu 1 304 -8 2272 106 0 0 chr2 133104665 133104957 -117582897 - AluSg SINE Alu -18 292 1 684 222 19 37 chr2 133104958 133105120 -117582734 - FRAM SINE Alu -18 158 1 23 33 0 0 chr2 133105555 133105585 -117582269 + AT_rich Low_complexity Low_complexity 1 30 0 348 272 67 12 chr2 133105855 133106119 -117581735 - L1MC4a LINE L1 -319 5802 5605 1652 191 7 7 chr2 133106711 133107005 -117580849 - AluSx SINE Alu -18 294 1 1169 231 45 17 chr2 133107485 133107775 -117580079 - AluJo SINE Alu -9 303 6 270 0 0 0 chr2 133107775 133107805 -117580049 + (GTTTG)n Simple_repeat Simple_repeat 3 32 0 2234 95 0 17 chr2 133107970 133108291 -117579563 - AluSx SINE Alu 0 312 1 1488 214 43 0 chr2 133108293 133108573 -117579281 - AluJb SINE Alu -20 292 1 2334 100 10 0 chr2 133108604 133108913 -117578941 - AluSx SINE Alu 0 312 1 1823 181 0 0 chr2 133108915 133109219 -117578635 - AluJb SINE Alu -8 304 1 758 173 28 56 chr2 133109227 133109406 -117578448 - L1MC4 LINE L1 0 8042 7869 910 218 68 21 chr2 133109461 133109695 -117578159 + MIR SINE MIR 12 256 -6 1582 178 27 17 chr2 133109701 133109993 -117577861 - AluJo SINE Alu -11 301 7 211 270 110 20 chr2 133112008 133112108 -117575746 - L2 LINE L2 -5 3267 3159 585 222 124 32 chr2 133112340 133112525 -117575329 - L1ME3 LINE L1 -5 6157 5956 693 135 0 18 chr2 133112761 133112872 -117574982 + L1PA15 LINE L1 6057 6165 0 322 260 83 39 chr2 133113368 133113549 -117574305 - L1M4 LINE L1 -1216 4930 4742 804 273 131 16 chr2 133113717 133114083 -117573771 - MLT1I LTR MaLR -1 408 1 326 270 92 18 chr2 133114091 133114254 -117573600 - L1M4 LINE L1 -1633 4513 4339 2283 114 0 3 chr2 133114253 133114562 -117573292 - AluSx SINE Alu -7 305 1 636 225 192 5 chr2 133114576 133114806 -117573048 - L1ME3 LINE L1 -471 5691 5433 315 269 43 91 chr2 133115218 133115302 -117572552 + L1ME4a LINE L1 5874 5961 -160 2115 105 0 0 chr2 133115302 133115588 -117572266 + AluSg SINE Alu 1 286 -24 315 269 43 91 chr2 133115588 133115689 -117572165 + L1ME4a LINE L1 5961 6050 -71 930 194 19 14 chr2 133115738 133115949 -117571905 - AluJo SINE Alu -17 295 84 2170 125 0 0 chr2 133116129 133116442 -117571412 - AluSq SINE Alu 0 313 1 812 153 8 0 chr2 133116522 133116646 -117571208 + FLAM_C SINE Alu 1 125 -8 21 0 0 0 chr2 133116646 133116667 -117571187 + AT_rich Low_complexity Low_complexity 1 21 0 612 311 7 82 chr2 133118984 133119254 -117568600 + L2 LINE L2 1090 1339 -1975 1509 300 205 9 chr2 133119260 133119410 -117568444 + L2 LINE L2 1925 2044 -1269 1992 86 36 26 chr2 133119410 133119713 -117568141 - AluSq SINE Alu -7 306 1 1509 300 205 9 chr2 133119713 133120713 -117567141 + L2 LINE L2 2044 3313 0 2026 120 7 0 chr2 133121024 133121341 -117566513 - AluSx SINE Alu 0 319 1 30 59 0 0 chr2 133122925 133122976 -117564878 + AT_rich Low_complexity Low_complexity 1 51 0 373 136 15 0 chr2 133123614 133123680 -117564174 + MER41B LTR ERV1 481 547 -88 1908 120 0 0 chr2 133123692 133123958 -117563896 + AluSq SINE Alu 1 266 -47 582 232 16 0 chr2 133124347 133124472 -117563382 - FLAM_C SINE Alu -6 127 1 355 254 127 17 chr2 133124472 133124653 -117563201 + L1MC4a LINE L1 5682 5882 -1926 361 247 319 0 chr2 133124761 133124927 -117562927 - MIR SINE MIR -40 222 4 1864 159 0 3 chr2 133125135 133125443 -117562411 + AluJb SINE Alu 1 307 -5 2248 93 3 0 chr2 133125528 133125830 -117562024 - AluY SINE Alu -8 303 1 2023 107 0 0 chr2 133126858 133127138 -117560716 + AluSx SINE Alu 14 293 -19 414 100 0 0 chr2 133127138 133127198 -117560656 + (TA)n Simple_repeat Simple_repeat 2 61 0 192 309 43 21 chr2 133127466 133127560 -117560294 - MER5B DNA MER1_type -79 99 4 495 85 0 32 chr2 133127592 133127686 -117560168 + (TA)n Simple_repeat Simple_repeat 1 91 0 824 157 8 0 chr2 133127745 133127879 -117559975 + AluJo SINE Alu 1 135 -177 564 314 86 19 chr2 133127922 133128342 -117559512 - L1ME4a LINE L1 -290 5831 5384 643 152 0 0 chr2 133128346 133128458 -117559396 - AluSg/x SINE Alu 0 310 199 444 274 10 15 chr2 133128493 133128690 -117559164 + AluSq SINE Alu 1 196 -107 1284 103 5 0 chr2 133128803 133128987 -117558867 + AluSc SINE Alu 115 299 -10 2578 139 12 9 chr2 133128995 133129425 -117558429 + L1MB2 LINE L1 5699 6129 -42 2436 55 0 0 chr2 133129425 133129732 -117558122 + AluY SINE Alu 1 307 -4 1789 160 7 3 chr2 133130387 133130687 -117557167 + AluJb SINE Alu 1 301 -11 813 177 0 73 chr2 133130714 133130906 -117556948 - FRAM SINE Alu -1 175 1 1957 117 7 7 chr2 133130932 133131232 -117556622 - AluSq SINE Alu -8 305 6 21 36 0 0 chr2 133131242 133131270 -117556584 + AT_rich Low_complexity Low_complexity 1 28 0 272 256 160 19 chr2 133132027 133132183 -117555671 + MER5B DNA MER1_type 1 178 0 915 73 81 0 chr2 133132508 133132631 -117555223 + MER85 DNA T2_type 1 133 -6 234 0 0 0 chr2 133133313 133133339 -117554515 + (CA)n Simple_repeat Simple_repeat 2 27 0 431 172 25 74 chr2 133133892 133133968 -117553886 + L1MB3 LINE L1 6068 6137 -46 2007 130 0 0 chr2 133133968 133134261 -117553593 - AluSx SINE Alu -19 293 1 431 172 25 74 chr2 133134261 133134306 -117553548 + L1MB3 LINE L1 6137 6183 0 2160 116 0 0 chr2 133134847 133135148 -117552706 + AluSc SINE Alu 1 301 -8 2287 104 17 43 chr2 133135329 133135674 -117552180 + MER1B DNA MER1_type 2 337 0 1995 119 3 0 chr2 133135906 133136200 -117551654 + AluSx SINE Alu 16 310 -2 1836 118 0 46 chr2 133136592 133136898 -117550956 - AluSx SINE Alu -20 292 1 231 280 90 0 chr2 133137777 133137877 -117549977 + MIR SINE MIR 32 140 -68 2038 121 37 0 chr2 133138150 133138447 -117549407 - AluSq SINE Alu -2 311 4 325 260 55 24 chr2 133138469 133138596 -117549258 - L1MC5 LINE L1 -45 7916 7786 1201 101 0 0 chr2 133138621 133138779 -117549075 - FRAM SINE Alu -21 155 1 288 0 0 0 chr2 133138784 133138815 -117549039 - L1MC5 LINE L1 -178 7783 7753 184 264 19 0 chr2 133138890 133138943 -117548911 + L2 LINE L2 3214 3267 -5 1841 179 86 25 chr2 133140028 133140459 -117547395 - MSTB2 LTR MaLR 0 457 1 234 184 102 20 chr2 133140553 133140651 -117547203 + L1MB3 LINE L1 6078 6183 0 1154 139 5 36 chr2 133140688 133140882 -117546972 + MER5A DNA MER1_type 1 188 -1 1425 163 0 36 chr2 133141387 133141639 -117546215 + AluJb SINE Alu 7 249 -63 2382 57 0 3 chr2 133141991 133142287 -117545567 + AluY SINE Alu 2 296 -15 231 188 0 0 chr2 133143973 133144021 -117543833 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 618 236 36 7 chr2 133144081 133144221 -117543633 - MLT1J LTR MaLR -129 382 239 2212 84 10 0 chr2 133144317 133144613 -117543241 - AluSp SINE Alu -14 299 1 539 235 6 62 chr2 133144619 133144781 -117543073 + MIR SINE MIR 110 262 0 1766 164 0 7 chr2 133146000 133146299 -117541555 + AluJb SINE Alu 1 297 -15 265 280 47 65 chr2 133146380 133146487 -117541367 - MIR SINE MIR -126 136 32 526 283 139 46 chr2 133146504 133146893 -117540961 - MLT1K LTR MaLR -22 566 142 1937 101 3 40 chr2 133147170 133147488 -117540366 + AluSx SINE Alu 1 307 0 1841 182 21 19 chr2 133147946 133148319 -117539535 - MLT1A2 LTR MaLR 0 374 1 2258 82 3 0 chr2 133148356 133148649 -117539205 + AluSg SINE Alu 1 294 -16 246 291 35 0 chr2 133148740 133148826 -117539028 - L1ME LINE L1 -241 5880 5792 309 307 192 0 chr2 133149081 133149261 -117538593 - MIR SINE MIR -43 219 8 638 253 148 9 chr2 133149461 133149690 -117538164 + MIR SINE MIR 2 262 0 302 243 11 57 chr2 133149690 133149867 -117537987 + (TTG)n Simple_repeat Simple_repeat 1 169 0 366 289 0 58 chr2 133149988 133150178 -117537676 + (TTG)n Simple_repeat Simple_repeat 2 180 0 1364 192 11 24 chr2 133151061 133151372 -117536482 - AluJo SINE Alu 0 307 1 666 190 0 0 chr2 133151448 133151569 -117536285 - FRAM SINE Alu -8 168 48 525 244 37 15 chr2 133151773 133151908 -117535946 - MLT1K LTR MaLR -356 149 12 1024 150 44 40 chr2 133151941 133152114 -117535740 - AluJo SINE Alu 0 312 136 2428 70 0 3 chr2 133152114 133152426 -117535428 - AluY SINE Alu 0 311 1 1024 150 44 40 chr2 133152426 133152478 -117535376 - AluJo SINE Alu -176 136 86 622 147 18 0 chr2 133152892 133153001 -117534853 + HY1 scRNA scRNA 2 112 0 546 142 115 62 chr2 133153024 133153137 -117534717 + FLAM_A SINE Alu 5 123 -10 22 35 0 0 chr2 133153140 133153169 -117534685 + AT_rich Low_complexity Low_complexity 1 29 0 384 203 43 0 chr2 133155005 133155074 -117532780 - L2 LINE L2 -43 3270 3199 400 105 0 0 chr2 133155115 133155172 -117532682 - Alu SINE Alu -14 297 241 1083 111 0 13 chr2 133155172 133155325 -117532529 - AluSq/x SINE Alu -161 151 1 978 136 13 0 chr2 133155336 133155491 -117532363 - AluSg/x SINE Alu -2 310 154 208 243 0 43 chr2 133156069 133156139 -117531715 - L2 LINE L2 -18 3254 3188 3657 120 44 7 chr2 133156329 133156894 -117530960 - Tigger3(Golem) DNA MER2_type 0 3029 2444 1032 148 69 21 chr2 133156896 133157085 -117530769 + AluJo SINE Alu 3 200 -112 1023 153 11 47 chr2 133157085 133157275 -117530579 - AluJo SINE Alu -128 184 2 1173 204 14 0 chr2 133157276 133157487 -117530367 - Tigger3(Golem) DNA MER2_type -2814 215 2 750 144 98 23 chr2 133157842 133157974 -117529880 - AluJo SINE Alu -164 148 7 275 93 47 0 chr2 133157980 133158023 -117529831 + Tigger3(Golem) DNA MER2_type 2443 2487 -542 1589 112 161 8 chr2 133158511 133158771 -117529083 - AluSg SINE Alu 0 300 1 678 235 152 82 chr2 133159546 133159828 -117528026 + MER46C DNA MER2_type 1 309 -29 3815 153 7 30 chr2 133159828 133160034 -117527820 - L1MA5 LINE L1 0 6300 6091 2180 121 0 0 chr2 133160034 133160341 -117527513 - AluSx SINE Alu -5 307 1 3815 153 7 30 chr2 133160341 133160831 -117527023 - L1MA5 LINE L1 -209 6091 5620 678 235 152 82 chr2 133160831 133160863 -117526991 + MER46C DNA MER2_type 309 337 -1 597 126 0 32 chr2 133161194 133161289 -117526565 + FRAM SINE Alu 60 151 -25 707 135 0 0 chr2 133161298 133161394 -117526460 + AluS SINE Alu 2 97 -216 361 223 11 53 chr2 133161775 133161869 -117525985 + L1MC4 LINE L1 6614 6703 -1339 321 178 55 14 chr2 133161829 133161902 -117525952 - L1MC3 LINE L1 -1139 6646 6571 * 769 260 31 35 chr2 133161936 133162190 -117525664 - MIR SINE MIR -3 259 7 2219 84 0 3 chr2 133162329 133162626 -117525228 - AluSg SINE Alu -14 296 1 2187 102 7 3 chr2 133162763 133163066 -117524788 - AluSx SINE Alu -8 304 1 2047 108 0 29 chr2 133163474 133163789 -117524065 + AluSq SINE Alu 1 306 -7 306 73 0 0 chr2 133163807 133163848 -117524006 + (T)n Simple_repeat Simple_repeat 1 41 0 351 333 17 28 chr2 133164005 133164185 -117523669 + GA-rich Low_complexity Low_complexity 1 178 0 1579 116 9 4 chr2 133164251 133164484 -117523370 - AluSq SINE Alu -79 234 1 452 291 126 63 chr2 133164785 133165008 -117522846 - MIR SINE MIR -6 256 20 1371 188 50 11 chr2 133165396 133165657 -117522197 + AluJo SINE Alu 5 275 -37 416 319 43 7 chr2 133165685 133165823 -117522031 + MIR SINE MIR 49 191 -71 1656 141 104 0 chr2 133166168 133166438 -117521416 + AluSx SINE Alu 1 298 -14 214 273 45 23 chr2 133167979 133168067 -117519787 + MIR SINE MIR 172 261 -1 381 273 91 0 chr2 133168352 133168473 -117519381 - MIR SINE MIR -108 154 23 2342 98 0 7 chr2 133168669 133168975 -117518879 + AluSx SINE Alu 1 304 -8 1765 145 6 69 chr2 133169871 133170189 -117517665 + AluJo SINE Alu 14 311 -1 315 0 0 0 chr2 133170277 133170312 -117517542 + (TTA)n Simple_repeat Simple_repeat 1 35 0 2239 102 0 3 chr2 133170408 133170703 -117517151 + AluSx SINE Alu 1 294 -18 309 135 0 0 chr2 133170847 133170899 -117516955 + (TG)n Simple_repeat Simple_repeat 1 52 0 27 29 0 0 chr2 133171511 133171545 -117516309 + AT_rich Low_complexity Low_complexity 1 34 0 464 188 58 36 chr2 133171614 133171752 -117516102 + MER83B-int LTR ERV1 3240 3380 -1500 1542 93 8 59 chr2 133171755 133171992 -117515862 - AluSc SINE Alu -7 302 78 1039 95 7 0 chr2 133171992 133172129 -117515725 - AluSp SINE Alu -175 138 1 12247 116 28 22 chr2 133172131 133174046 -117513808 - L1PBa LINE L1 -4936 1927 2 188 292 15 62 chr2 133174773 133174838 -117513016 - MIR SINE MIR -119 143 82 291 304 0 13 chr2 133176556 133176635 -117511219 + MIR SINE MIR 23 100 -108 2415 131 0 19 chr2 133176788 133177154 -117510700 + MER46B DNA MER2_type 1 234 -2 236 246 175 48 chr2 133178372 133178498 -117509356 + L2 LINE L2 2925 3066 -206 2522 57 7 0 chr2 133179053 133179350 -117508504 + AluY SINE Alu 1 299 -12 2464 64 10 10 chr2 133179913 133180224 -117507630 + AluY SINE Alu 1 311 0 912 285 101 36 chr2 133180262 133180893 -117506961 + L1MC4a LINE L1 5264 5935 -1873 359 227 140 52 chr2 133181325 133181554 -117506300 - L1ME4a LINE L1 -5 6116 5868 502 278 199 0 chr2 133181638 133181854 -117506000 - L1ME4a LINE L1 -372 5749 5491 1619 183 17 27 chr2 133183825 133184126 -117503728 - AluJb SINE Alu -14 298 1 1762 162 27 27 chr2 133184677 133184974 -117502880 - AluJb SINE Alu -15 297 1 224 83 65 46 chr2 133186000 133186108 -117501746 + (TTATA)n Simple_repeat Simple_repeat 5 114 0 2344 59 10 3 chr2 133187733 133188021 -117499833 - AluY SINE Alu -21 290 1 2254 91 7 0 chr2 133188026 133188312 -117499542 - AluSg SINE Alu -22 288 1 1963 132 3 16 chr2 133189023 133189326 -117498528 + AluJb SINE Alu 1 299 -13 4321 167 61 32 chr2 133189804 133189848 -117498006 - L1MB7 LINE L1 -7 6177 6136 2243 101 0 7 chr2 133189848 133190145 -117497709 + AluSx SINE Alu 1 295 -17 4321 167 61 32 chr2 133190145 133191057 -117496797 - L1MB7 LINE L1 -48 6136 5150 2099 138 0 0 chr2 133191057 133191354 -117496500 - AluSx SINE Alu -15 297 1 4321 167 61 32 chr2 133191354 133192132 -117495722 - L1MB7 LINE L1 -1034 5150 4396 253 214 79 0 chr2 133192135 133192224 -117495630 - L1ME4a LINE L1 -3 6118 6023 717 312 60 25 chr2 133192346 133192743 -117495111 + MLT1K LTR MaLR 126 536 -52 2667 26 3 0 chr2 133192858 133193160 -117494694 - AluY SINE Alu -8 303 1 1910 138 0 17 chr2 133193577 133193874 -117493980 - AluJo SINE Alu -15 297 6 347 254 0 0 chr2 133193991 133194054 -117493800 + L2 LINE L2 3230 3292 -21 2151 136 0 0 chr2 133194056 133194357 -117493497 + AluSq SINE Alu 3 303 -10 2110 122 3 3 chr2 133194415 133194711 -117493143 - AluSq SINE Alu -6 307 12 203 200 22 0 chr2 133196229 133196274 -117491580 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 1713 170 31 3 chr2 133196622 133196911 -117490943 + AluJb SINE Alu 1 297 -15 815 189 8 0 chr2 133196916 133197048 -117490806 + AluJo SINE Alu 2 134 -178 2038 108 10 14 chr2 133197050 133197345 -117490509 + AluSx SINE Alu 1 294 -18 2327 97 0 10 chr2 133197420 133197729 -117490125 + AluSg SINE Alu 1 306 -4 629 117 89 10 chr2 133197730 133197851 -117490003 + L1MB7 LINE L1 6051 6168 -3 349 247 127 13 chr2 133197897 133198047 -117489807 + L1MC4 LINE L1 6889 7055 -987 1753 224 83 46 chr2 133198056 133198530 -117489324 + L1ME3A LINE L1 5534 6030 -140 2167 132 0 0 chr2 133198530 133198833 -117489021 - AluSx SINE Alu -4 308 6 1753 224 83 46 chr2 133198833 133198877 -117488977 + L1ME3A LINE L1 6030 6071 -99 1469 260 125 21 chr2 133198926 133199648 -117488206 + L1MC4 LINE L1 7004 7813 -24 2173 128 0 0 chr2 133199749 133200046 -117487808 - AluSq SINE Alu -16 297 1 342 233 93 0 chr2 133200177 133200263 -117487591 + L1MC4 LINE L1 7809 7902 -140 2394 93 0 3 chr2 133200406 133200708 -117487146 + AluSq SINE Alu 1 301 -12 1942 153 7 0 chr2 133200803 133201103 -117486751 + AluSx SINE Alu 1 302 -10 2023 138 0 10 chr2 133201111 133201409 -117486445 + AluSx SINE Alu 1 295 -17 1910 142 11 7 chr2 133201765 133202074 -117485780 - AluSx SINE Alu 0 310 1 2002 148 0 3 chr2 133202077 133202374 -117485480 - AluJb SINE Alu -16 296 1 23 0 0 0 chr2 133203379 133203402 -117484452 + AT_rich Low_complexity Low_complexity 1 23 0 461 218 36 9 chr2 133204416 133204526 -117483328 + MER3 DNA MER1_type 44 156 -53 472 191 147 37 chr2 133204806 133204942 -117482912 + MIR SINE MIR 91 241 -21 697 234 42 0 chr2 133204985 133205152 -117482702 - MER63A DNA MER1_type -36 174 1 424 270 116 93 chr2 133205264 133205475 -117482379 + L3 LINE CR1 439 644 -933 1653 183 28 0 chr2 133205475 133205760 -117482094 - AluJb SINE Alu -19 293 1 424 270 116 93 chr2 133205760 133205849 -117482005 + L3 LINE CR1 644 730 -847 2190 120 10 0 chr2 133205849 133206150 -117481704 + AluSx SINE Alu 1 304 -8 424 270 116 93 chr2 133206150 133206255 -117481599 + L3 LINE CR1 730 854 -723 851 214 125 25 chr2 133206269 133206851 -117481003 + L1MC5 LINE L1 7246 7924 -37 2354 85 3 0 chr2 133206859 133207152 -117480702 + AluSx SINE Alu 1 294 -18 451 220 209 28 chr2 133207199 133207381 -117480473 + L1MC5 LINE L1 7703 7917 -44 1542 154 11 33 chr2 133207415 133207543 -117480311 + AluJo SINE Alu 13 142 -170 2291 111 3 0 chr2 133207543 133207841 -117480013 + AluSp SINE Alu 1 299 -14 1542 154 11 33 chr2 133207841 133207984 -117479870 + AluJo SINE Alu 142 278 -34 826 195 0 0 chr2 133207992 133208115 -117479739 - FLAM_C SINE Alu -19 124 2 24 0 0 0 chr2 133208116 133208140 -117479714 + AT_rich Low_complexity Low_complexity 1 24 0 1409 216 110 89 chr2 133208140 133209269 -117478585 + L1ME LINE L1 452 1641 -4439 890 247 126 16 chr2 133209363 133209618 -117478236 + L3 LINE CR1 1223 1505 -72 38 0 0 0 chr2 133210139 133210177 -117477677 + AT_rich Low_complexity Low_complexity 1 38 0 2166 120 17 0 chr2 133210833 133211133 -117476721 + AluSx SINE Alu 1 305 -7 2315 86 0 3 chr2 133211298 133211588 -117476266 + AluSx SINE Alu 5 293 -19 2475 95 0 0 chr2 133212593 133212899 -117474955 + AluSq SINE Alu 1 306 -7 2113 123 3 0 chr2 133212899 133213191 -117474663 + AluSg SINE Alu 1 293 -17 935 107 15 0 chr2 133213439 133213570 -117474284 + AluSg SINE Alu 1 133 -177 2146 127 0 3 chr2 133213570 133213870 -117473984 + AluSg SINE Alu 1 299 -11 361 257 96 15 chr2 133214095 133214231 -117473623 - L1ME4a LINE L1 -16 6105 5959 2342 91 0 7 chr2 133214429 133214736 -117473118 + AluY SINE Alu 1 305 -6 2491 32 39 32 chr2 133214764 133215073 -117472781 + AluY SINE Alu 1 311 0 1119 71 0 0 chr2 133215383 133215524 -117472330 - AluY SINE Alu -2 309 169 1448 234 75 84 chr2 133215607 133215645 -117472209 + L1MC5 LINE L1 7169 7206 -755 679 256 0 0 chr2 133215645 133215774 -117472080 + FLAM_A SINE Alu 2 130 -3 1448 234 75 84 chr2 133215774 133216484 -117471370 + L1MC5 LINE L1 7206 7910 -51 1977 127 7 39 chr2 133216861 133217169 -117470685 - AluJb SINE Alu -14 298 1 1686 134 30 11 chr2 133217173 133217441 -117470413 - AluJo SINE Alu -11 301 29 32 0 0 0 chr2 133217504 133217536 -117470318 + AT_rich Low_complexity Low_complexity 1 32 0 1845 140 56 0 chr2 133217996 133218282 -117469572 + AluSx SINE Alu 1 302 -10 403 159 227 0 chr2 133218456 133218544 -117469310 + L1ME3 LINE L1 5946 6053 -109 1714 91 0 9 chr2 133218544 133218765 -117469089 - AluSq SINE Alu -6 307 89 1463 233 166 44 chr2 133218783 133219622 -117468232 + L2 LINE L2 2394 3313 0 2131 95 60 0 chr2 133219758 133220041 -117467813 + AluSc SINE Alu 1 300 -9 477 279 176 41 chr2 133220332 133220651 -117467203 - L2 LINE L2 -20 3293 2932 347 298 120 31 chr2 133220691 133220882 -117466972 - L2 LINE L2 -832 2482 2275 315 282 77 26 chr2 133222370 133222526 -117465328 + MIR SINE MIR 84 247 -15 542 337 138 36 chr2 133225433 133225943 -117461911 - L2 LINE L2 -4 3268 2655 2194 121 0 0 chr2 133225943 133226241 -117461613 + AluSg SINE Alu 1 298 -12 542 337 138 36 chr2 133226241 133226458 -117461396 - L2 LINE L2 -617 2655 2461 913 145 0 93 chr2 133226469 133226641 -117461213 + FRAM SINE Alu 1 156 -20 1173 285 90 49 chr2 133226694 133227428 -117460426 - L2 LINE L2 -904 2410 1647 2218 117 0 0 chr2 133227590 133227890 -117459964 + AluSx SINE Alu 2 301 -11 623 280 100 41 chr2 133227962 133228025 -117459829 + MLT1L LTR MaLR 249 307 -308 1578 161 29 82 chr2 133228025 133228341 -117459513 + AluJo SINE Alu 5 303 -9 623 280 100 41 chr2 133228341 133228616 -117459238 + MLT1L LTR MaLR 307 607 -8 190 0 67 0 chr2 133228709 133228739 -117459115 + (TTG)n Simple_repeat Simple_repeat 2 33 0 927 133 0 7 chr2 133228739 133228869 -117458985 - FLAM_C SINE Alu -14 129 1 721 269 114 35 chr2 133228944 133229346 -117458508 - L2 LINE L2 -1872 1442 1009 1742 141 4 0 chr2 133229362 133229665 -117458189 + AluSx SINE Alu 35 338 0 2204 112 3 0 chr2 133229792 133230078 -117457776 + AluSq SINE Alu 1 287 -26 31 26 0 0 chr2 133230078 133230116 -117457738 + AT_rich Low_complexity Low_complexity 1 38 0 2151 109 0 0 chr2 133230119 133230425 -117457429 + AluSx SINE Alu 1 306 0 1957 131 24 3 chr2 133230531 133230829 -117457025 + AluSx SINE Alu 1 304 -8 2108 91 3 25 chr2 133231387 133231702 -117456152 + AluSg SINE Alu 1 309 0 1991 113 17 14 chr2 133231945 133232236 -117455618 - AluSx SINE Alu -20 292 1 223 378 18 73 chr2 133232242 133232406 -117455448 - L2 LINE L2 -5 3267 3113 2306 97 13 3 chr2 133233489 133233797 -117454057 + AluSq SINE Alu 1 311 -2 180 0 0 0 chr2 133234328 133234348 -117453506 + (T)n Simple_repeat Simple_repeat 1 20 0 2270 88 0 0 chr2 133234595 133234906 -117452948 + AluY SINE Alu 1 311 0 595 153 42 8 chr2 133234941 133235059 -117452795 - PRIMA41-int LTR ERV1 -1094 6662 6541 1675 245 107 7 chr2 133235193 133235810 -117452044 + L1M4 LINE L1 3566 4244 -1902 1139 233 59 5 chr2 133235817 133236208 -117451646 + L1M4 LINE L1 4282 4693 -1453 498 227 13 13 chr2 133236249 133236399 -117451455 + L1M4 LINE L1 4799 4948 -1198 536 254 106 0 chr2 133236546 133236735 -117451119 + MIR SINE MIR 28 236 -26 1597 143 45 36 chr2 133236773 133237081 -117450773 + AluSx SINE Alu 1 311 -1 50 31 0 0 chr2 133237110 133237174 -117450680 + AT_rich Low_complexity Low_complexity 1 64 0 1751 170 3 3 chr2 133237687 133237975 -117449879 + AluSx SINE Alu 1 288 -24 405 49 0 85 chr2 133238266 133238348 -117449506 - AluSp/q SINE Alu -4 309 235 712 166 28 28 chr2 133238469 133238502 -117449352 + MER21A LTR ERV1 787 819 -112 453 92 0 0 chr2 133238502 133238578 -117449276 + (CTTG)n Simple_repeat Simple_repeat 3 78 0 712 166 28 28 chr2 133238578 133238689 -117449165 + MER21A LTR ERV1 818 931 0 191 345 78 35 chr2 133238689 133238831 -117449023 - L2 LINE L2 -1372 1942 1795 986 188 41 66 chr2 133239009 133239328 -117448526 - L1MB8 LINE L1 -51 6127 5817 2238 74 7 3 chr2 133240944 133241254 -117446600 - AluSp SINE Alu 0 311 1 1034 171 10 16 chr2 133241437 133241630 -117446224 + AluJo SINE Alu 120 311 -1 26 30 0 0 chr2 133241725 133241758 -117446096 + AT_rich Low_complexity Low_complexity 1 33 0 1364 124 15 0 chr2 133242366 133242568 -117445286 - AluSg/x SINE Alu -10 302 98 2070 53 147 0 chr2 133243271 133243571 -117444283 + LTR14A LTR ERVK 1 344 0 630 269 0 0 chr2 133243867 133244034 -117443820 + FLAM_A SINE Alu 2 168 0 242 208 114 87 chr2 133244090 133244239 -117443615 + L1ME4a LINE L1 5513 5665 -456 324 234 109 118 chr2 133244304 133244633 -117443221 + L1ME4a LINE L1 5793 6118 -3 2133 120 10 3 chr2 133244737 133245045 -117442809 + AluSx SINE Alu 1 310 -2 2337 166 47 5 chr2 133245179 133245588 -117442266 + MSTB LTR MaLR 1 426 0 305 210 86 0 chr2 133246320 133246401 -117441453 + MER94 DNA DNA 2 89 -45 225 313 85 55 chr2 133246882 133247083 -117440771 + L3 LINE CR1 290 496 -1081 374 316 220 17 chr2 133247254 133247599 -117440255 - L3 LINE CR1 -358 1219 805 1624 196 0 7 chr2 133247622 133247918 -117439936 - AluJb SINE Alu -14 298 5 296 332 137 39 chr2 133247987 133248192 -117439662 + L3 LINE CR1 1233 1457 -120 227 264 0 0 chr2 133248367 133248420 -117439434 + MER58 DNA MER1_type 37 89 -126 387 244 34 0 chr2 133249922 133250041 -117437813 + L1MB8 LINE L1 5134 5256 -890 2073 127 3 10 chr2 133250076 133250390 -117437464 - AluSx SINE Alu 0 312 1 1786 189 3 0 chr2 133250393 133250690 -117437164 - AluJb SINE Alu -14 298 1 1747 137 10 48 chr2 133250696 133251019 -117436835 - AluSx SINE Alu 0 312 1 3414 174 69 32 chr2 133251054 133251939 -117435915 + L1MB8 LINE L1 5256 6173 -5 773 299 93 62 chr2 133252657 133253805 -117434049 + L1MC4a LINE L1 3001 4112 -2034 735 175 130 72 chr2 133253805 133253991 -117433863 + MER46A DNA MER2_type 1 204 -2527 1769 113 8 12 chr2 133253991 133254248 -117433606 - AluSq SINE Alu -57 256 1 735 175 130 72 chr2 133254248 133254284 -117433570 + MER46A DNA MER2_type 204 236 0 773 299 93 62 chr2 133254284 133254882 -117432972 + L1MC4a LINE L1 4112 4690 -1456 1260 176 118 11 chr2 133254882 133255154 -117432700 + AluJb SINE Alu 1 301 -11 773 299 93 62 chr2 133255154 133255313 -117432541 + L1MC4a LINE L1 4690 4843 -1303 2050 187 26 26 chr2 133255313 133255810 -117432044 + L1MB8 LINE L1 5682 6178 0 773 299 93 62 chr2 133255810 133256093 -117431761 + L1MC4a LINE L1 4843 5259 -887 275 103 0 0 chr2 133256103 133256142 -117431712 - U2 snRNA snRNA -149 39 1 234 0 0 0 chr2 133256181 133256207 -117431647 + (A)n Simple_repeat Simple_repeat 1 26 0 5318 210 111 57 chr2 133256219 133256334 -117431520 + L1MC4a LINE L1 5296 5403 -2405 2328 82 0 3 chr2 133256334 133256625 -117431229 + AluSp SINE Alu 15 304 -9 5318 210 111 57 chr2 133256625 133258525 -117429329 + L1MC4a LINE L1 5403 7420 -388 709 225 42 0 chr2 133258543 133258734 -117429120 + L1MD3 LINE L1 7797 7995 0 1653 151 39 18 chr2 133258738 133259022 -117428832 + AluJb SINE Alu 1 290 -22 237 353 80 43 chr2 133259579 133259766 -117428088 + L2 LINE L2 2889 3082 -190 234 354 23 54 chr2 133259848 133259978 -117427876 - L2 LINE L2 -629 2685 2560 2132 91 7 11 chr2 133260824 133261109 -117426745 + AluSx SINE Alu 14 297 -15 23 54 0 0 chr2 133261605 133261642 -117426212 + AT_rich Low_complexity Low_complexity 1 37 0 750 278 126 11 chr2 133261831 133262382 -117425472 - L1MC4a LINE L1 -116 7692 7154 2116 135 0 0 chr2 133262811 133263108 -117424746 + AluSx SINE Alu 1 297 -15 348 351 0 6 chr2 133266246 133266420 -117421434 + CT-rich Low_complexity Low_complexity 2 174 0 407 318 8 7 chr2 133266477 133266808 -117421046 + CT-rich Low_complexity Low_complexity 1 331 0 326 133 17 0 chr2 133267365 133267425 -117420429 - L1MD3 LINE L1 -10 7985 7925 530 282 27 136 chr2 133270256 133270770 -117417084 - MER21B LTR ERV1 -402 461 4 727 206 67 18 chr2 133271182 133271347 -117416507 - FRAM SINE Alu 0 176 4 2239 117 0 0 chr2 133271362 133271660 -117416194 - AluSx SINE Alu -14 298 1 2257 116 3 0 chr2 133272149 133272459 -117415395 - AluSx SINE Alu -1 311 1 1032 80 120 0 chr2 133272887 133273037 -117414817 + AluYa5 SINE Alu 131 298 -13 21 36 0 0 chr2 133274386 133274414 -117413440 + GC_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr2 133275354 133275386 -117412468 + AT_rich Low_complexity Low_complexity 1 32 0 650 190 0 0 chr2 133275987 133276103 -117411751 + FLAM_A SINE Alu 19 134 -8 374 188 59 147 chr2 133276309 133276406 -117411448 + MIR SINE MIR 108 185 -77 2128 84 30 3 chr2 133276406 133276702 -117411152 + AluSp SINE Alu 1 304 -9 374 188 59 147 chr2 133276702 133276774 -117411080 + MIR SINE MIR 185 262 0 2096 110 4 0 chr2 133278026 133278352 -117409502 + AluSg SINE Alu 1 327 0 1385 203 13 43 chr2 133278949 133279254 -117408600 - AluJo SINE Alu -16 296 1 1906 129 0 17 chr2 133279562 133279857 -117407997 + MER1B DNA MER1_type 50 339 0 24 0 0 0 chr2 133279977 133280001 -117407853 + AT_rich Low_complexity Low_complexity 1 24 0 2269 120 3 3 chr2 133280085 133280393 -117407461 - AluSx SINE Alu -4 308 1 618 14 0 0 chr2 133280416 133280487 -117407367 + (TTTTA)n Simple_repeat Simple_repeat 3 73 0 977 137 0 0 chr2 133280488 133280627 -117407227 - AluSg/x SINE Alu -36 274 136 569 169 59 29 chr2 133280703 133280801 -117407053 + L1MD2 LINE L1 5729 5823 -536 5348 160 69 31 chr2 133280801 133281423 -117406431 - Tigger3b DNA MER2_type -1797 1231 634 2240 91 0 20 chr2 133281423 133281721 -117406133 - AluSq SINE Alu -21 292 1 237 33 0 0 chr2 133281726 133281756 -117406098 + (TTG)n Simple_repeat Simple_repeat 2 31 0 5348 160 69 31 chr2 133281756 133282313 -117405541 - Tigger3b DNA MER2_type -2397 631 1 569 169 59 29 chr2 133282313 133282350 -117405504 + L1MD2 LINE L1 5823 5868 -491 3651 135 67 61 chr2 133282351 133283159 -117404695 - Tigger1 DNA MER2_type 0 2418 1606 2728 123 23 36 chr2 133283205 133283241 -117404613 - Tigger1 DNA MER2_type -801 1617 1582 1231 194 116 12 chr2 133283241 133283382 -117404472 - AluJo SINE Alu -13 289 164 207 0 0 0 chr2 133283382 133283405 -117404449 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1231 194 116 12 chr2 133283405 133283521 -117404333 - AluJo SINE Alu -138 164 5 2728 123 23 36 chr2 133283521 133284012 -117403842 - Tigger1 DNA MER2_type -836 1582 1097 2342 66 0 26 chr2 133284012 133284315 -117403539 - AluY SINE Alu -16 295 1 1907 150 35 9 chr2 133284317 133284664 -117403190 - Tigger1 DNA MER2_type -2008 410 55 201 147 0 0 chr2 133284664 133284698 -117403156 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 1610 160 108 0 chr2 133284720 133285045 -117402809 - MER46B DNA MER2_type -1 235 1 1952 138 7 3 chr2 133285563 133285845 -117402009 - AluSx SINE Alu -29 283 1 1475 204 47 45 chr2 133285945 133286390 -117401464 - L1M4 LINE L1 -1158 4988 4543 829 171 151 26 chr2 133286390 133286731 -117401123 - Charlie1 DNA MER1_type -116 2645 3 460 283 130 8 chr2 133286733 133286949 -117400905 + MIR SINE MIR 12 249 -13 544 191 99 19 chr2 133287100 133287262 -117400592 - MER110 LTR ERV1 0 491 317 1811 141 0 30 chr2 133287482 133287781 -117400073 + AluSx SINE Alu 1 290 -22 877 300 121 19 chr2 133288012 133288375 -117399479 - L2 LINE L2 -3 3310 2911 1918 122 0 0 chr2 133289525 133289780 -117398074 - AluSx SINE Alu -57 255 1 21 0 0 0 chr2 133290010 133290031 -117397823 + AT_rich Low_complexity Low_complexity 1 21 0 557 282 69 52 chr2 133290405 133290571 -117397283 - HAL1 LINE L1 -711 1796 1621 2479 81 3 3 chr2 133290571 133290879 -117396975 - AluSc SINE Alu -1 308 1 557 282 69 52 chr2 133290879 133291017 -117396837 - HAL1 LINE L1 -886 1621 1487 1069 219 77 47 chr2 133291242 133291673 -117396181 - L1ME2 LINE L1 -25 6139 5692 2384 97 0 19 chr2 133292081 133292400 -117395454 + AluSq SINE Alu 1 313 0 299 185 0 0 chr2 133292400 133292454 -117395400 - AluJo/FLAM SINE Alu -189 113 60 839 219 60 4 chr2 133292461 133292712 -117395142 + L1MB5 LINE L1 5907 6171 -3 2091 119 0 45 chr2 133294992 133295304 -117392550 - AluSx SINE Alu -14 298 1 1654 179 31 7 chr2 133295688 133295978 -117391876 - AluJo SINE Alu -15 297 1 2155 89 7 0 chr2 133296488 133296798 -117391056 - AluSx SINE Alu 0 312 1 3363 156 34 6 chr2 133296807 133297449 -117390405 - L1MB7 LINE L1 0 6184 5525 868 171 66 113 chr2 133297449 133297723 -117390131 + MLT1B LTR MaLR 130 390 0 2343 90 10 3 chr2 133297828 133298128 -117389726 + AluSc SINE Alu 1 302 -7 2763 172 40 85 chr2 133298134 133298553 -117389301 + L1MB8 LINE L1 5401 5768 -410 1596 194 40 0 chr2 133298553 133298826 -117389028 + AluJb SINE Alu 1 284 -28 2763 172 40 85 chr2 133298826 133299209 -117388645 + L1MB8 LINE L1 5768 6167 -11 2455 71 0 0 chr2 133299330 133299626 -117388228 - AluY SINE Alu -15 296 1 317 280 131 0 chr2 133300475 133300582 -117387272 - MLT1K LTR MaLR -340 248 128 807 232 81 0 chr2 133300977 133301162 -117386692 + MER3 DNA MER1_type 9 208 -1 372 258 58 45 chr2 133301236 133301391 -117386463 + MIR SINE MIR 106 262 0 486 49 0 0 chr2 133301859 133301920 -117385934 + (TG)n Simple_repeat Simple_repeat 1 61 0 1782 160 11 28 chr2 133301938 133302225 -117385629 - AluJb SINE Alu -30 282 1 1071 107 20 0 chr2 133303166 133303316 -117384538 - AluSg/x SINE Alu -54 256 104 507 327 61 35 chr2 133303417 133303729 -117384125 + L2 LINE L2 2101 2420 -894 716 290 126 9 chr2 133303873 133304104 -117383750 + MIR SINE MIR 3 260 -2 418 293 23 8 chr2 133304123 133304256 -117383598 + L2 LINE L2 3146 3280 -33 2350 78 7 7 chr2 133304475 133304781 -117383073 - AluSx SINE Alu -6 306 1 21 0 0 0 chr2 133304956 133304977 -117382877 + AT_rich Low_complexity Low_complexity 1 21 0 353 252 63 56 chr2 133305186 133305473 -117382381 - L1ME LINE L1 -333 5837 5563 746 264 25 38 chr2 133307004 133307239 -117380615 + MIR SINE MIR 5 236 -26 339 294 67 47 chr2 133307406 133307661 -117380193 - L1ME LINE L1 -952 5194 4935 1754 180 3 13 chr2 133308234 133308539 -117379315 + AluJo SINE Alu 1 302 -10 755 169 15 0 chr2 133308598 133308728 -117379126 - FLAM_C SINE Alu 0 133 2 616 287 93 1 chr2 133308913 133309144 -117378710 - MIR SINE MIR -4 258 8 267 306 18 0 chr2 133309253 133309356 -117378498 + MIR3 SINE MIR 71 177 -31 216 0 0 0 chr2 133310160 133310184 -117377670 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1486 196 35 0 chr2 133310185 133310445 -117377409 - AluJo SINE Alu -43 269 1 198 0 0 0 chr2 133310448 133310470 -117377384 + (T)n Simple_repeat Simple_repeat 1 22 0 2071 128 0 27 chr2 133311477 133311773 -117376081 - AluSx SINE Alu -24 288 1 252 229 67 0 chr2 133311880 133311985 -117375869 - L1MC4 LINE L1 -1 8041 7930 1705 183 3 0 chr2 133312099 133312389 -117375465 - AluSx SINE Alu -21 291 1 565 224 17 0 chr2 133312960 133313076 -117374778 - FLAM_A SINE Alu -15 118 1 1947 134 3 0 chr2 133314159 133314466 -117373388 - AluSx SINE Alu 0 308 1 1567 277 48 6 chr2 133314467 133314944 -117372910 - MLT1H1 LTR MaLR -58 497 1 2078 94 47 10 chr2 133314971 133315268 -117372586 + AluSc SINE Alu 1 308 -1 2230 108 7 0 chr2 133315510 133315807 -117372047 - AluSc SINE Alu -10 299 1 2247 84 0 7 chr2 133316554 133316865 -117370989 + AluSg SINE Alu 1 309 0 1920 144 7 26 chr2 133318279 133318585 -117369269 + AluJb SINE Alu 1 300 -12 21 0 0 0 chr2 133318620 133318641 -117369213 + AT_rich Low_complexity Low_complexity 1 21 0 1415 176 54 34 chr2 133319352 133319648 -117368206 + AluJo SINE Alu 1 302 0 1466 165 85 7 chr2 133319660 133319932 -117367922 + AluJb SINE Alu 1 293 -19 182 200 13 120 chr2 133319933 133320008 -117367846 + MIR SINE MIR 196 262 0 1707 198 135 72 chr2 133321559 133322055 -117365799 - MLT1E3 LTR MaLR 0 624 84 2061 137 3 0 chr2 133322055 133322355 -117365499 + AluSx SINE Alu 1 301 -11 1707 198 135 72 chr2 133322355 133322445 -117365409 - MLT1E3 LTR MaLR -540 84 1 485 283 44 0 chr2 133322544 133322657 -117365197 + L2 LINE L2 3150 3267 -5 237 275 137 38 chr2 133322988 133323119 -117364735 - MIR SINE MIR -71 191 48 26 39 0 20 chr2 133325527 133325561 -117362293 + AT_rich Low_complexity Low_complexity 1 35 -15 2394 58 0 14 chr2 133325561 133325855 -117361999 + AluY SINE Alu 1 290 -21 26 39 0 20 chr2 133325855 133325871 -117361983 + AT_rich Low_complexity Low_complexity 35 50 0 2298 84 10 3 chr2 133326684 133326981 -117360873 - AluSq SINE Alu -14 299 1 189 0 0 0 chr2 133326983 133327004 -117360850 + (T)n Simple_repeat Simple_repeat 1 21 0 2171 115 0 7 chr2 133327256 133327560 -117360294 + AluSq SINE Alu 1 302 -11 22 0 0 0 chr2 133330144 133330166 -117357688 + AT_rich Low_complexity Low_complexity 1 22 0 350 353 58 66 chr2 133332227 133332607 -117355247 - L2 LINE L2 -20 3252 2876 2444 73 3 0 chr2 133332633 133332936 -117354918 + AluY SINE Alu 1 304 -7 181 378 50 17 chr2 133333203 133333322 -117354532 - L2 LINE L2 -572 2742 2620 768 176 28 7 chr2 133333444 133333586 -117354268 + AluJb SINE Alu 117 261 -51 1954 143 18 0 chr2 133333687 133333973 -117353881 + AluSq SINE Alu 1 291 -22 785 229 110 9 chr2 133334024 133334242 -117353612 + MER21B LTR ERV1 1 240 -623 1976 85 14 11 chr2 133334452 133334758 -117353096 + AluSx SINE Alu 1 307 0 522 355 100 29 chr2 133335033 133335492 -117352362 - L2 LINE L2 -342 2972 2465 1790 76 4 8 chr2 133335492 133335728 -117352126 + AluSp SINE Alu 78 312 -1 522 355 100 29 chr2 133335728 133335826 -117352028 - L2 LINE L2 -849 2465 2375 22 70 0 0 chr2 133335922 133335965 -117351889 + AT_rich Low_complexity Low_complexity 1 43 0 260 330 38 9 chr2 133336117 133336223 -117351631 + MIR3 SINE MIR 89 197 -11 382 244 0 0 chr2 133336851 133336937 -117350917 + L1MC5 LINE L1 7822 7907 -54 23 0 0 0 chr2 133337743 133337766 -117350088 + AT_rich Low_complexity Low_complexity 1 23 0 2016 134 0 10 chr2 133339779 133340071 -117347783 + AluSx SINE Alu 1 289 -23 212 336 37 19 chr2 133340756 133340863 -117346991 + MIR SINE MIR 23 131 -131 738 216 42 32 chr2 133340899 133341089 -117346765 - MIR SINE MIR -42 220 29 247 229 66 0 chr2 133341111 133341172 -117346682 + MIR SINE MIR 128 192 -70 189 0 0 0 chr2 133341285 133341306 -117346548 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 692 231 51 64 chr2 133342278 133342512 -117345342 - MIR SINE MIR -9 253 23 248 343 34 79 chr2 133342697 133342793 -117345061 - L2 LINE L2 -292 2980 2894 1733 155 36 4 chr2 133342793 133343070 -117344784 + AluJb SINE Alu 1 286 -26 248 343 34 79 chr2 133343070 133343151 -117344703 - L2 LINE L2 -378 2894 2811 893 201 5 43 chr2 133343244 133343428 -117344426 - MER58A DNA MER1_type -4 220 44 248 362 148 20 chr2 133343483 133343632 -117344222 - L2 LINE L2 -584 2730 2563 206 211 322 0 chr2 133343631 133343721 -117344133 + L2 LINE L2 3194 3312 -1 * 2242 111 3 7 chr2 133345238 133345545 -117342309 + AluSx SINE Alu 3 308 -4 326 250 250 0 chr2 133347886 133348018 -117339836 - MIR SINE MIR 0 262 98 2886 92 49 2 chr2 133349216 133349627 -117338227 + L1PA13 LINE L1 5715 6144 -19 2113 96 7 23 chr2 133349753 133350054 -117337800 + AluSx SINE Alu 1 296 -16 270 250 16 0 chr2 133350269 133350333 -117337521 - MER46C DNA MER2_type -1 337 273 1329 224 0 0 chr2 133350367 133350613 -117337241 + AluSx SINE Alu 36 281 -31 333 162 73 0 chr2 133351216 133351284 -117336570 - MER46C DNA MER2_type -162 176 104 2457 67 0 0 chr2 133352200 133352497 -117335357 - AluY SINE Alu -14 297 1 1614 137 13 54 chr2 133352631 133352946 -117334908 + AluSx SINE Alu 4 305 -7 252 264 35 58 chr2 133353312 133353399 -117334455 - L2 LINE L2 -18 3295 3211 266 252 124 116 chr2 133353844 133354005 -117333849 - MIR SINE MIR 0 262 97 1577 170 17 7 chr2 133354005 133354299 -117333555 + AluJb SINE Alu 11 307 -5 266 252 124 116 chr2 133354299 133354387 -117333467 - MIR SINE MIR -165 97 11 243 246 18 0 chr2 133354554 133354611 -117333243 - L1ME4a LINE L1 -69 6052 5995 22 0 0 0 chr2 133354809 133354831 -117333023 + AT_rich Low_complexity Low_complexity 1 22 0 2049 117 41 0 chr2 133354871 133355161 -117332693 - AluSx SINE Alu -8 304 3 269 95 48 0 chr2 133355194 133355236 -117332618 - MER4E-int LTR ERV1 -6714 44 1 5452 74 19 3 chr2 133355236 133355976 -117331878 - MER4E LTR ERV1 0 766 15 2264 104 0 0 chr2 133355976 133356274 -117331580 + AluSx SINE Alu 1 298 -14 1513 186 133 6 chr2 133356667 133357006 -117330848 - MER58D DNA MER1_type -4 382 1 1957 120 20 0 chr2 133357392 133357684 -117330170 + AluSq SINE Alu 1 298 -15 2388 226 48 101 chr2 133358118 133359016 -117328838 + L1MEc LINE L1 36 885 -5511 873 253 154 17 chr2 133359085 133359560 -117328294 + L1MEc LINE L1 1085 1777 -4619 2152 92 20 7 chr2 133359829 133360121 -117327733 + AluSx SINE Alu 1 296 -16 203 290 161 0 chr2 133361810 133361903 -117325951 + MIR SINE MIR 37 144 -118 189 196 0 0 chr2 133362233 133362279 -117325575 + (TG)n Simple_repeat Simple_repeat 2 47 0 2263 41 4 4 chr2 133362331 133362601 -117325253 - AluY SINE Alu -14 297 28 35 0 0 0 chr2 133364779 133364814 -117323040 + AT_rich Low_complexity Low_complexity 1 35 0 251 203 0 0 chr2 133365137 133365196 -117322658 + (CCA)n Simple_repeat Simple_repeat 2 60 0 614 124 0 62 chr2 133365611 133365724 -117322130 + FLAM_C SINE Alu 3 108 -35 2080 245 146 13 chr2 133365724 133366337 -117321517 - L1MEc LINE L1 -2304 3911 3381 2046 142 0 0 chr2 133366337 133366632 -117321222 + AluSx SINE Alu 1 295 -17 2080 245 146 13 chr2 133366632 133366973 -117320881 - L1MEc LINE L1 -2834 3381 2830 1013 113 7 0 chr2 133367003 133367144 -117320710 + AluSg/x SINE Alu 94 235 -77 1973 184 24 65 chr2 133367224 133367559 -117320295 - L1MB5 LINE L1 -15 6228 5881 219 36 0 0 chr2 133367559 133367587 -117320267 + (CA)n Simple_repeat Simple_repeat 1 28 0 1973 184 24 65 chr2 133367587 133367684 -117320170 - L1MB5 LINE L1 -362 5881 5820 2227 91 7 0 chr2 133367684 133368012 -117319842 - AluSx SINE Alu 0 312 1 1973 184 24 65 chr2 133368012 133368116 -117319738 - L1MB5 LINE L1 -423 5820 5713 363 23 0 0 chr2 133368127 133368171 -117319683 + (TG)n Simple_repeat Simple_repeat 2 45 0 1041 164 9 9 chr2 133368171 133368384 -117319470 - L1MB5 LINE L1 -845 5370 5158 1840 243 23 18 chr2 133368396 133368729 -117319125 - L1MB5 LINE L1 -1101 5114 4775 2368 52 41 0 chr2 133368729 133368750 -117319104 - AluY SINE Alu -9 302 283 286 51 0 0 chr2 133368750 133368789 -117319065 + (TTG)n Simple_repeat Simple_repeat 1 180 0 2368 52 41 0 chr2 133368789 133369057 -117318797 - AluY SINE Alu -28 283 1 1840 243 23 18 chr2 133369057 133369286 -117318568 - L1MB5 LINE L1 -1440 4775 4549 525 213 164 54 chr2 133369302 133369737 -117318117 - L1MB5 LINE L1 -3620 2595 2133 569 77 0 0 chr2 133369743 133369821 -117318033 - U6 snRNA snRNA -3 104 27 426 254 35 25 chr2 133369862 133370063 -117317791 - L1MEc LINE L1 -4328 2068 1866 2007 105 14 27 chr2 133370075 133370370 -117317484 + AluSx SINE Alu 1 291 -21 2231 111 0 26 chr2 133370384 133370690 -117317164 + AluSx SINE Alu 1 298 -14 2834 143 91 72 chr2 133371186 133371561 -117316293 - Tigger3b DNA MER2_type -2308 720 353 351 0 0 0 chr2 133371561 133371600 -117316254 + (TG)n Simple_repeat Simple_repeat 2 40 0 2834 143 91 72 chr2 133371600 133371614 -117316240 - Tigger3b DNA MER2_type -2675 353 341 1979 149 3 3 chr2 133371614 133371909 -117315945 - AluJb SINE Alu -17 295 1 2834 143 91 72 chr2 133371909 133371950 -117315904 - Tigger3b DNA MER2_type -2687 341 302 1665 177 7 10 chr2 133371950 133372249 -117315605 - AluJo SINE Alu -14 298 1 2834 143 91 72 chr2 133372249 133372523 -117315331 - Tigger3b DNA MER2_type -2726 302 1 316 276 97 35 chr2 133372529 133372674 -117315180 + L1ME2 LINE L1 5718 5871 -293 1457 129 51 90 chr2 133372707 133373063 -117314791 - MER46B DNA MER2_type -3 233 17 2288 116 0 10 chr2 133373077 133373388 -117314466 + AluSx SINE Alu 3 310 -2 189 0 0 0 chr2 133375646 133375667 -117312187 + (A)n Simple_repeat Simple_repeat 1 21 0 2248 82 7 23 chr2 133376256 133376561 -117311293 + AluSx SINE Alu 1 300 -12 205 379 81 17 chr2 133377351 133377525 -117310329 + MIR3 SINE MIR 20 204 -4 285 163 0 0 chr2 133381566 133381615 -117306239 - Alu SINE Alu -14 286 238 815 254 43 5 chr2 133382121 133382330 -117305524 + MIR SINE MIR 20 236 -26 1850 144 29 29 chr2 133382368 133382680 -117305174 + AluSx SINE Alu 1 312 0 50 31 0 0 chr2 133382711 133382775 -117305079 + AT_rich Low_complexity Low_complexity 1 64 0 1776 167 3 3 chr2 133383288 133383576 -117304278 + AluSx SINE Alu 1 288 -24 1536 91 5 27 chr2 133383867 133384088 -117303766 - AluSq SINE Alu -4 309 94 2151 129 0 0 chr2 133384415 133384709 -117303145 + AluSx SINE Alu 1 294 -18 243 103 0 0 chr2 133385448 133385487 -117302367 + (TG)n Simple_repeat Simple_repeat 1 39 0 2004 133 13 3 chr2 133385545 133385845 -117302009 + AluSx SINE Alu 1 303 -9 443 232 0 11 chr2 133385886 133385981 -117301873 + FRAM SINE Alu 1 92 -84 214 149 0 43 chr2 133386524 133386571 -117301283 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 345 130 0 14 chr2 133386585 133386654 -117301200 - Alu SINE Alu -1 301 234 630 166 0 65 chr2 133386654 133386793 -117301061 - AluJb SINE Alu -182 130 1 460 217 114 97 chr2 133387559 133387734 -117300120 + MER45A DNA AcHobo 1 178 0 1787 157 38 0 chr2 133388767 133389054 -117298800 + AluSx SINE Alu 1 298 -14 1972 162 0 0 chr2 133389252 133389548 -117298306 + AluSx SINE Alu 1 296 -16 204 135 0 0 chr2 133390650 133390687 -117297167 + (TC)n Simple_repeat Simple_repeat 1 37 0 2163 122 3 0 chr2 133390692 133390987 -117296867 - AluSx SINE Alu -16 296 1 286 234 65 104 chr2 133391032 133391186 -117296668 + MIR SINE MIR 13 160 -102 941 108 0 8 chr2 133391189 133391318 -117296536 + AluSq/x SINE Alu 1 128 -185 308 235 12 35 chr2 133391325 133391410 -117296444 + MIR SINE MIR 170 252 -10 2155 123 7 0 chr2 133391481 133391782 -117296072 - AluSx SINE Alu -9 303 1 276 30 0 0 chr2 133391786 133391819 -117296035 + (T)n Simple_repeat Simple_repeat 1 33 0 183 313 121 62 chr2 133392027 133392251 -117295603 - MIR SINE MIR -24 238 2 2246 119 0 0 chr2 133392522 133392815 -117295039 + AluSx SINE Alu 2 294 -18 2067 134 0 0 chr2 133393211 133393502 -117294352 + AluSq SINE Alu 1 291 -22 763 187 13 13 chr2 133393961 133394111 -117293743 - LTR31 LTR ERV1 -16 603 454 1352 190 19 85 chr2 133394225 133394589 -117293265 - LTR31 LTR ERV1 -176 443 104 2323 97 0 0 chr2 133395442 133395740 -117292114 + AluSx SINE Alu 5 302 -10 2299 110 0 0 chr2 133395995 133396294 -117291560 + AluSx SINE Alu 1 299 -13 408 20 0 0 chr2 133396674 133396723 -117291131 + (CATA)n Simple_repeat Simple_repeat 1 49 0 234 293 0 0 chr2 133396726 133396784 -117291070 + L2 LINE L2 3251 3308 -5 2291 71 4 0 chr2 133396788 133397110 -117290744 - AluY SINE Alu 0 323 1 1766 164 22 22 chr2 133397472 133397784 -117290070 - AluJo SINE Alu 0 312 1 309 275 239 9 chr2 133398491 133398600 -117289254 + MIR SINE MIR 15 148 -114 4461 143 46 30 chr2 133398658 133399187 -117288667 + L1MB1 LINE L1 5226 5745 -423 1532 208 0 11 chr2 133399187 133399471 -117288383 + AluJo SINE Alu 13 293 -19 4461 143 46 30 chr2 133399471 133399638 -117288216 + L1MB1 LINE L1 5745 5908 -260 1955 141 17 3 chr2 133399638 133399935 -117287919 + AluSx SINE Alu 1 301 -11 4461 143 46 30 chr2 133399935 133400136 -117287718 + L1MB1 LINE L1 5908 6144 -24 1347 226 154 5 chr2 133400643 133401032 -117286822 - MER82 DNA MER2_type -6 647 201 2017 128 3 0 chr2 133401376 133401666 -117286188 + AluSx SINE Alu 1 291 -21 358 250 9 60 chr2 133401773 133401889 -117285965 - MER5B DNA MER1_type -68 110 1 567 179 67 0 chr2 133403101 133403235 -117284619 + L1MB1 LINE L1 6026 6168 0 183 114 0 0 chr2 133403435 133403470 -117284384 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 330 223 81 47 chr2 133403833 133403981 -117283873 - L1ME4a LINE L1 -23 6098 5946 1812 138 62 0 chr2 133404057 133404333 -117283521 + AluJo SINE Alu 1 293 -19 1052 164 6 0 chr2 133404371 133404536 -117283318 + AluSq SINE Alu 136 301 -12 1954 127 19 10 chr2 133404627 133404935 -117282919 - AluSx SINE Alu -1 311 1 2087 110 28 0 chr2 133405043 133405333 -117282521 + AluSx SINE Alu 1 298 -14 1490 186 133 6 chr2 133405726 133406065 -117281789 - MER58D DNA MER1_type -4 382 1 1950 123 20 0 chr2 133406451 133406743 -117281111 + AluSq SINE Alu 1 298 -15 2182 224 48 101 chr2 133407177 133408075 -117279779 + L1MEc LINE L1 36 885 -5511 807 252 152 17 chr2 133408144 133408620 -117279234 + L1MEc LINE L1 1085 1777 -4619 915 189 142 71 chr2 133408794 133409202 -117278652 + L1ME1 LINE L1 5726 6162 -4 1715 183 10 0 chr2 133409226 133409515 -117278339 - AluJo SINE Alu -20 292 1 538 159 0 11 chr2 133409825 133409913 -117277941 + AluSg/x SINE Alu 84 170 -142 226 208 0 0 chr2 133410008 133410056 -117277798 + MER58 DNA MER1_type 56 103 -112 244 231 31 0 chr2 133410076 133410141 -117277713 + MER58 DNA MER1_type 2354 2420 0 536 277 71 15 chr2 133410172 133410439 -117277415 + L1ME3A LINE L1 5681 5962 -208 2076 150 3 0 chr2 133410496 133410796 -117277058 + AluSx SINE Alu 1 301 -11 2491 77 0 0 chr2 133410873 133411183 -117276671 - AluY SINE Alu -1 310 1 2284 120 85 12 chr2 133411301 133411700 -117276154 - MSTA LTR MaLR 0 428 1 892 8 0 39 chr2 133411705 133411835 -117276019 + (TAGA)n Simple_repeat Simple_repeat 2 126 0 1059 282 85 24 chr2 133411914 133412325 -117275529 - L2 LINE L2 -1485 1829 1394 3204 147 79 66 chr2 133413594 133413827 -117274027 - MER44D DNA MER2_type -1882 705 476 1510 181 13 59 chr2 133413827 133414130 -117273724 + AluJo SINE Alu 1 289 -23 3204 147 79 66 chr2 133414130 133414592 -117273262 - MER44D DNA MER2_type -2111 476 1 732 166 26 13 chr2 133414636 133414787 -117273067 - L1MB8 LINE L1 0 6178 6026 379 123 62 0 chr2 133414787 133414852 -117273002 + L1M3 LINE L1 5728 5796 -387 737 124 9 0 chr2 133414852 133414965 -117272889 + FRAM SINE Alu 62 175 -1 1829 123 31 20 chr2 133414965 133415103 -117272751 + AluSx SINE Alu 1 136 -176 2226 76 41 7 chr2 133415103 133415394 -117272460 + AluY SINE Alu 1 301 -10 1829 123 31 20 chr2 133415394 133415548 -117272306 + AluSx SINE Alu 136 296 -16 2149 110 4 0 chr2 133416694 133417002 -117270852 - AluSx SINE Alu 0 309 1 1903 128 57 0 chr2 133417200 133417481 -117270373 - AluSx SINE Alu -15 297 1 396 244 251 7 chr2 133417500 133417779 -117270075 - L1ME4a LINE L1 -199 5922 5576 180 356 99 40 chr2 133417989 133418090 -117269764 - MIR SINE MIR -68 140 34 854 177 13 19 chr2 133418224 133418382 -117269472 + FRAM SINE Alu 11 167 -9 2527 60 0 0 chr2 133418570 133418869 -117268985 + AluY SINE Alu 1 299 -12 203 176 0 73 chr2 133419049 133419102 -117268752 + T-rich Low_complexity Low_complexity 6 55 -13 6131 26 1 1 chr2 133419102 133419784 -117268070 - SVA Other Other -3 1383 702 203 176 0 73 chr2 133419784 133419798 -117268056 + T-rich Low_complexity Low_complexity 55 68 0 535 216 106 33 chr2 133420731 133421004 -117266850 - L1MC5 LINE L1 -60 7901 7609 417 163 92 0 chr2 133421036 133421134 -117266720 - L1MC5 LINE L1 -515 7446 7340 2047 146 3 0 chr2 133421399 133421700 -117266154 + AluSx SINE Alu 1 302 -10 2253 62 4 0 chr2 133421820 133422093 -117265761 - AluY SINE Alu -37 274 1 1656 122 30 104 chr2 133423064 133423400 -117264454 + AluSp SINE Alu 1 311 -2 494 188 38 15 chr2 133423491 133423624 -117264230 + L1MC5 LINE L1 7037 7172 -789 390 284 143 25 chr2 133423709 133424085 -117263769 + L1MC5 LINE L1 7257 7566 -395 1670 158 34 17 chr2 133424107 133424399 -117263455 + AluJo SINE Alu 1 297 -15 2384 97 0 7 chr2 133424400 133424710 -117263144 + AluSx SINE Alu 3 310 -2 364 137 0 27 chr2 133424814 133424887 -117262967 + L1MC5 LINE L1 7841 7911 -50 463 211 11 0 chr2 133424901 133424996 -117262858 - AluJb SINE Alu -16 296 201 1480 194 7 34 chr2 133424999 133425293 -117262561 - AluJo SINE Alu -26 286 1 254 154 0 0 chr2 133425320 133425359 -117262495 + AluJb SINE Alu 1 39 -262 2582 65 0 0 chr2 133425361 133425669 -117262185 + AluY SINE Alu 1 308 -3 1736 182 0 0 chr2 133425667 133425936 -117261918 + AluJb SINE Alu 27 295 -17 * 230 292 89 10 chr2 133426109 133426317 -117261537 + L1ME LINE L1 5538 5595 -526 3614 195 95 38 chr2 133426393 133427486 -117260368 + L1MC4 LINE L1 6781 7949 -93 243 0 0 0 chr2 133427486 133427513 -117260341 + (CA)n Simple_repeat Simple_repeat 2 28 0 3614 195 95 38 chr2 133427513 133427612 -117260242 + L1MC4 LINE L1 7949 8041 -1 2218 86 0 71 chr2 133427789 133428115 -117259739 + AluY SINE Alu 1 303 -8 1552 164 98 4 chr2 133428766 133429041 -117258813 + AluJo SINE Alu 1 301 -11 309 307 171 7 chr2 133429055 133429195 -117258659 - L2 LINE L2 -4 3268 3106 375 208 150 29 chr2 133429200 133429373 -117258481 + L1ME LINE L1 5629 5822 -299 2075 114 0 0 chr2 133429393 133429706 -117258148 + AluSg SINE Alu 1 313 0 619 198 83 0 chr2 133429755 133429912 -117257942 + L1ME4a LINE L1 5336 5505 -661 2256 120 0 0 chr2 133429924 133430223 -117257631 + AluSq SINE Alu 2 300 -13 979 112 112 0 chr2 133430223 133430393 -117257461 + L1PA15 LINE L1 5912 6100 -65 295 229 51 62 chr2 133430419 133431200 -117256654 + L1ME4a LINE L1 5495 6079 -85 1711 192 7 3 chr2 133431200 133431502 -117256352 - AluJb SINE Alu -8 304 2 295 229 51 62 chr2 133431502 133431587 -117256267 + L1ME4a LINE L1 6079 6163 -1 2108 103 7 14 chr2 133431587 133431877 -117255977 + AluSg SINE Alu 1 288 -22 198 0 0 0 chr2 133431881 133431903 -117255951 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1263 110 0 12 chr2 133432045 133432218 -117255636 + AluSg/x SINE Alu 127 297 -13 233 212 152 0 chr2 133432247 133432313 -117255541 + L1MC5 LINE L1 7723 7798 -163 231 169 141 28 chr2 133432315 133432386 -117255468 + L1MC5 LINE L1 7833 7911 -50 2343 85 7 3 chr2 133432558 133432864 -117254990 - AluSg SINE Alu -3 307 1 1720 164 35 14 chr2 133433923 133434210 -117253644 + AluJo SINE Alu 1 293 -19 2167 141 0 0 chr2 133434297 133434609 -117253245 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 133434615 133434636 -117253218 + AT_rich Low_complexity Low_complexity 1 21 0 2199 102 33 3 chr2 133435830 133436134 -117251720 - AluSq SINE Alu 0 313 1 2233 114 0 16 chr2 133436362 133436678 -117251176 + AluSx SINE Alu 1 311 -1 1495 108 5 9 chr2 133438998 133439210 -117248644 + AluSc SINE Alu 83 293 -16 460 136 37 12 chr2 133439238 133439319 -117248535 - AluSg/x SINE Alu -13 296 214 1588 89 5 14 chr2 133439783 133439997 -117247857 + AluSq SINE Alu 85 296 -17 2640 51 0 0 chr2 133440461 133440772 -117247082 - AluY SINE Alu 0 311 1 1817 123 0 4 chr2 133441806 133442049 -117245805 - AluSx SINE Alu -16 296 55 362 265 124 60 chr2 133442096 133442281 -117245573 + L2 LINE L2 3117 3313 0 1725 146 31 59 chr2 133442326 133442513 -117245341 - AluJo SINE Alu 0 312 121 187 31 62 0 chr2 133442513 133442545 -117245309 + T-rich Low_complexity Low_complexity 2 35 0 2039 113 0 3 chr2 133442545 133442828 -117245026 - AluY SINE Alu -29 282 1 1725 146 31 59 chr2 133442828 133442960 -117244894 - AluJo SINE Alu -189 123 1 232 188 0 21 chr2 133443107 133443155 -117244699 + (TATG)n Simple_repeat Simple_repeat 3 49 0 1553 86 29 20 chr2 133443439 133443665 -117244189 - MER4E LTR ERV1 -520 246 16 2467 88 0 0 chr2 133443665 133443971 -117243883 + AluSx SINE Alu 1 306 -6 1553 86 29 20 chr2 133443971 133443988 -117243866 - MER4E LTR ERV1 -750 16 1 963 189 25 37 chr2 133444006 133444250 -117243604 - L1MB2 LINE L1 -95 6076 5836 2290 108 0 0 chr2 133444256 133444563 -117243291 - AluSq SINE Alu -6 307 1 334 137 0 0 chr2 133444565 133444616 -117243238 - L1MB2 LINE L1 -500 5671 5621 343 275 119 23 chr2 133444949 133445167 -117242687 - L1MB2 LINE L1 -841 5305 5067 28 61 0 0 chr2 133445168 133445217 -117242637 + AT_rich Low_complexity Low_complexity 1 49 0 422 273 70 67 chr2 133445273 133445573 -117242281 - L1MB2 LINE L1 -1226 4920 4620 2149 92 20 3 chr2 133445751 133446045 -117241809 + AluSp SINE Alu 5 303 -10 22 56 0 0 chr2 133446079 133446115 -117241739 + AT_rich Low_complexity Low_complexity 1 36 0 916 241 61 5 chr2 133446337 133446567 -117241287 + MIR SINE MIR 1 239 -23 623 267 119 58 chr2 133446778 133447123 -117240731 - L2 LINE L2 -674 2640 2275 183 342 213 10 chr2 133447144 133447346 -117240508 + L2 LINE L2 2603 2845 -469 513 97 0 0 chr2 133447397 133447469 -117240385 - Alu SINE Alu -10 301 230 1183 77 0 0 chr2 133447469 133447612 -117240242 - AluSq/x SINE Alu -170 143 1 4505 77 3 2 chr2 133447659 133448245 -117239609 - LTR14C LTR ERVK 0 587 1 1785 116 67 4 chr2 133448573 133448862 -117238992 - AluSq SINE Alu 0 306 1 470 368 36 16 chr2 133448909 133449162 -117238692 + MIR SINE MIR 2 259 -3 1459 174 0 56 chr2 133449230 133449330 -117238524 + AluJo SINE Alu 42 146 -166 1518 120 0 0 chr2 133449330 133449546 -117238308 + AluSg/x SINE Alu 85 300 -10 1459 174 0 56 chr2 133449546 133449722 -117238132 + AluJo SINE Alu 146 304 -8 1925 121 3 39 chr2 133449722 133450027 -117237827 - AluSx SINE Alu -18 294 1 210 208 208 13 chr2 133450046 133450123 -117237731 - L2 LINE L2 -1293 2021 1930 302 296 12 12 chr2 133450365 133450446 -117237408 + L2 LINE L2 3232 3312 -1 430 189 33 22 chr2 133450670 133450760 -117237094 - AluJb SINE Alu -82 230 140 1333 148 120 0 chr2 133450804 133451088 -117236766 - L1MD1 LINE L1 -20 6222 5905 181 330 10 72 chr2 133451313 133451410 -117236444 + MIR SINE MIR 4 94 -168 23364 122 86 75 chr2 133451417 133456448 -117231406 + L1P LINE L1 12 5097 -1049 1992 223 21 8 chr2 133456443 133456927 -117230927 - L1M4 LINE L1 -1028 5118 4629 * 391 263 120 5 chr2 133456925 133457134 -117230720 - L1M4 LINE L1 -2293 3853 3621 * 416 286 103 28 chr2 133457225 133457624 -117230230 - L1M4 LINE L1 -3575 2571 2143 21 0 0 0 chr2 133457677 133457698 -117230156 + AT_rich Low_complexity Low_complexity 1 21 0 2364 81 3 3 chr2 133460061 133460370 -117227484 - AluY SINE Alu -2 309 1 22 0 0 0 chr2 133460638 133460660 -117227194 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 133461452 133461473 -117226381 + AT_rich Low_complexity Low_complexity 1 21 0 906 181 6 2 chr2 133462014 133463228 -117224626 - ALR/Alpha Satellite centromeric 0 1218 1 1019 174 92 9 chr2 133463335 133463553 -117224301 - AluJo SINE Alu -75 237 2 21 0 0 0 chr2 133463601 133463622 -117224232 + AT_rich Low_complexity Low_complexity 1 21 0 398 313 185 16 chr2 133463869 133464236 -117223618 + L2 LINE L2 2247 2675 -639 261 216 20 0 chr2 133464459 133464510 -117223344 + L2 LINE L2 2698 2749 -565 637 232 26 0 chr2 133464510 133464661 -117223193 + MER3 DNA MER1_type 2 156 -53 550 338 65 31 chr2 133464693 133464821 -117223033 + L2 LINE L2 2742 2864 -449 2050 157 3 0 chr2 133464821 133465121 -117222733 - AluSx SINE Alu -11 301 1 550 338 65 31 chr2 133465121 133465323 -117222531 + L2 LINE L2 2864 3082 -231 197 343 0 0 chr2 133465414 133465481 -117222373 + L2 LINE L2 3158 3224 -89 2270 114 0 0 chr2 133465639 133465936 -117221918 - AluSg SINE Alu -13 297 1 41 58 0 0 chr2 133466181 133466250 -117221604 + AT_rich Low_complexity Low_complexity 1 69 0 21 0 0 0 chr2 133466272 133466293 -117221561 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 133466432 133466461 -117221393 + AT_rich Low_complexity Low_complexity 1 29 0 1675 153 14 34 chr2 133467252 133467547 -117220307 - AluJb SINE Alu -19 293 5 363 270 58 71 chr2 133468114 133468340 -117219514 - L1MB8 LINE L1 -149 6029 5807 273 344 73 7 chr2 133468591 133468742 -117219112 + MIR SINE MIR 2 162 -100 242 286 16 32 chr2 133469128 133469254 -117218600 - L1MEd LINE L1 -4738 1572 1449 701 302 120 38 chr2 133469278 133469811 -117218043 + L1MC4 LINE L1 7270 7846 -196 546 255 99 11 chr2 133470134 133470490 -117217364 - L1MEd LINE L1 -4862 1257 947 2859 238 48 64 chr2 133470506 133471057 -117216797 - L1ME3A LINE L1 0 6170 5612 1820 180 123 17 chr2 133471057 133471479 -117216375 - MLT1C LTR MaLR 0 467 1 2859 238 48 64 chr2 133471479 133472012 -117215842 - L1ME3A LINE L1 -558 5612 5072 6452 109 49 16 chr2 133472012 133473044 -117214810 - MER11C LTR ERVK -4 1067 1 2859 238 48 64 chr2 133473044 133473173 -117214681 - L1ME3A LINE L1 -1098 5072 4943 288 0 0 0 chr2 133473173 133473205 -117214649 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 2859 238 48 64 chr2 133473205 133473225 -117214629 - L1ME3A LINE L1 -1227 4943 4924 1942 122 14 0 chr2 133473225 133473503 -117214351 - AluSx SINE Alu -30 282 1 2859 238 48 64 chr2 133473503 133473646 -117214208 - L1ME3A LINE L1 -1246 4924 4780 1014 201 20 0 chr2 133473646 133473850 -117214004 + MER3 DNA MER1_type 2 209 0 2859 238 48 64 chr2 133473850 133474182 -117213672 - L1ME3A LINE L1 -1390 4780 4487 433 306 79 77 chr2 133474578 133474861 -117212993 - L1MEd LINE L1 -5167 952 666 2448 83 0 3 chr2 133474861 133475173 -117212681 - AluSq SINE Alu -2 311 1 433 306 79 77 chr2 133475173 133475229 -117212625 - L1MEd LINE L1 -5453 666 612 325 341 0 0 chr2 133475238 133475326 -117212528 - L1MEd LINE L1 -5566 553 466 485 286 55 20 chr2 133475377 133475576 -117212278 - L1ME2 LINE L1 -6 6158 5953 558 192 9 145 chr2 133475617 133475831 -117212023 - L1MC4 LINE L1 -6 8036 7852 483 48 0 0 chr2 133475843 133475905 -117211949 + MER41B LTR ERV1 481 542 -93 601 261 49 25 chr2 133475937 133476016 -117211838 - L1MC4 LINE L1 -205 7837 7761 1456 229 26 3 chr2 133476016 133476321 -117211533 - AluJo SINE Alu 0 312 1 601 261 49 25 chr2 133476321 133476486 -117211368 - L1MC4 LINE L1 -281 7761 7587 447 261 197 47 chr2 133476496 133476876 -117210978 - L1MC4 LINE L1 -516 7526 7090 229 102 61 0 chr2 133476876 133476925 -117210929 + CT-rich Low_complexity Low_complexity 4 55 0 995 57 0 0 chr2 133476938 133477061 -117210793 - AluY SINE Alu -2 309 187 342 115 0 0 chr2 133477083 133477135 -117210719 + (TTCC)n Simple_repeat Simple_repeat 3 54 0 22939 30 0 0 chr2 133477266 133480833 -117207021 + L1PA3 LINE L1 2585 6150 -5 2185 83 13 30 chr2 133481210 133481512 -117206342 + AluY SINE Alu 1 297 -14 2023 83 9 98 chr2 133481772 133482099 -117205755 - AluSx SINE Alu -14 298 1 548 281 71 27 chr2 133482264 133482488 -117205366 + L1ME3A LINE L1 5414 5647 -523 333 209 40 0 chr2 133482491 133482639 -117205215 + (TA)n Simple_repeat Simple_repeat 1 154 0 606 201 85 93 chr2 133482677 133482936 -117204918 + L1ME3A LINE L1 5701 5957 -213 404 251 40 70 chr2 133482934 133483133 -117204721 + L1ME3A LINE L1 5908 6100 -70 * 227 190 17 0 chr2 133483242 133483300 -117204554 + (TA)n Simple_repeat Simple_repeat 2 60 0 1578 198 26 10 chr2 133483442 133483745 -117204109 - AluJo SINE Alu -4 308 1 233 320 86 40 chr2 133483769 133483944 -117203910 - LTR33 LTR ERVL -3 518 336 1763 167 0 52 chr2 133484441 133484765 -117203089 + AluJb SINE Alu 6 312 0 508 244 59 83 chr2 133484904 133485313 -117202541 - L1MC5 LINE L1 -35 7926 7528 2274 115 0 0 chr2 133485357 133485661 -117202193 - AluSx SINE Alu -8 304 1 21 0 0 0 chr2 133485661 133485682 -117202172 + AT_rich Low_complexity Low_complexity 1 21 0 1914 200 78 0 chr2 133486710 133487105 -117200749 - MSTB LTR MaLR 0 426 1 1607 187 0 20 chr2 133487253 133487547 -117200307 - AluJb SINE Alu -17 295 8 1186 170 30 9 chr2 133488196 133488426 -117199428 + L1MB3 LINE L1 5896 6130 -53 2404 73 7 0 chr2 133488936 133489238 -117198616 - AluY SINE Alu -7 304 1 2440 86 0 0 chr2 133490355 133490659 -117197195 + AluY SINE Alu 1 304 -7 16905 31 3 0 chr2 133490843 133492898 -117194956 - L1P LINE L1 -1500 4646 2585 86 10 0 10 chr2 133493410 133493480 -117194374 + AT_rich Low_complexity Low_complexity 1 71 -32 1936 129 7 7 chr2 133493480 133493760 -117194094 + AluSx SINE Alu 10 289 -23 86 10 0 10 chr2 133493760 133493793 -117194061 + AT_rich Low_complexity Low_complexity 71 103 0 551 60 12 0 chr2 133493850 133493934 -117193920 + (CAAAA)n Simple_repeat Simple_repeat 3 87 0 1285 161 50 4 chr2 133494345 133494587 -117193267 - Tigger1 DNA MER2_type 0 2418 2166 13612 122 20 14 chr2 133494752 133495233 -117192621 - Tigger1 DNA MER2_type -256 2162 1686 2007 125 10 17 chr2 133495233 133495530 -117192324 - AluSx SINE Alu -15 297 3 13612 122 20 14 chr2 133495530 133497193 -117190661 - Tigger1 DNA MER2_type -732 1686 4 255 229 0 36 chr2 133497205 133497288 -117190566 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 289 215 0 0 chr2 133497466 133497531 -117190323 - Tigger1 DNA MER2_type -2350 68 4 273 229 0 36 chr2 133497532 133497626 -117190228 + (TTATA)n Simple_repeat Simple_repeat 1 90 0 2013 33 8 0 chr2 133497948 133498188 -117189666 + L1PA3 LINE L1 5911 6152 -3 275 296 126 43 chr2 133498499 133498961 -117188893 + HAL1b LINE L1 71 570 -778 * 4890 145 39 7 chr2 133498929 133499846 -117188008 + L1MA4 LINE L1 5192 6134 -166 1131 126 13 0 chr2 133500072 133500231 -117187623 - AluSg/x SINE Alu -18 292 132 2128 122 0 7 chr2 133500231 133500534 -117187320 - AluY SINE Alu -10 301 1 364 343 43 37 chr2 133501230 133501557 -117186297 + L1MEd LINE L1 7 335 -5784 1524 219 106 46 chr2 133501644 133501818 -117186036 + L1ME2 LINE L1 4825 4987 -1177 678 13 0 0 chr2 133501818 133501897 -117185957 + (TA)n Simple_repeat Simple_repeat 2 80 0 1524 219 106 46 chr2 133501897 133502635 -117185219 + L1ME2 LINE L1 4987 5789 -375 351 226 98 10 chr2 133502642 133502744 -117185110 + L1ME2 LINE L1 5841 5951 -213 198 143 0 0 chr2 133502781 133502816 -117185038 + (TGGA)n Simple_repeat Simple_repeat 2 36 0 383 130 0 14 chr2 133502820 133502889 -117184965 + (GGAA)n Simple_repeat Simple_repeat 2 69 0 22 56 0 0 chr2 133503286 133503322 -117184532 + AT_rich Low_complexity Low_complexity 1 36 0 2084 95 27 3 chr2 133503356 133503652 -117184202 - AluSp SINE Alu -10 303 1 2146 122 3 0 chr2 133503719 133504013 -117183841 - AluSx SINE Alu -17 295 1 2392 66 3 7 chr2 133504020 133504325 -117183529 - AluY SINE Alu -7 304 1 25 31 0 0 chr2 133504552 133504584 -117183270 + AT_rich Low_complexity Low_complexity 1 32 0 240 149 0 0 chr2 133504786 133504833 -117183021 + (TG)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr2 133505046 133505067 -117182787 + AT_rich Low_complexity Low_complexity 1 21 0 185 329 57 0 chr2 133505440 133505510 -117182344 - L2 LINE L2 -12 3260 3187 293 273 154 9 chr2 133506115 133506225 -117181629 - MIR SINE MIR -114 148 23 427 320 105 26 chr2 133506302 133506608 -117181246 - L2 LINE L2 -1543 1771 1442 1729 144 68 4 chr2 133507097 133507375 -117180479 + AluJb SINE Alu 1 296 -16 410 344 63 21 chr2 133507383 133507572 -117180282 - MIR3 SINE MIR -9 199 3 2523 81 0 0 chr2 133507645 133507955 -117179899 - AluSx SINE Alu -2 310 1 2251 105 4 1 chr2 133508100 133508483 -117179371 - L1MC/D LINE L1 -745 5401 5042 567 280 144 11 chr2 133509379 133509650 -117178204 - MER102a DNA MER1_type -21 309 3 24 0 0 0 chr2 133509851 133509875 -117177979 + AT_rich Low_complexity Low_complexity 1 24 0 2188 103 3 0 chr2 133510341 133510633 -117177221 + AluSq SINE Alu 3 295 -18 270 225 25 25 chr2 133510731 133510811 -117177043 - L1MC5 LINE L1 -54 7907 7828 696 210 0 0 chr2 133510885 133511009 -117176845 - FLAM_A SINE Alu -9 124 1 2085 117 27 0 chr2 133511163 133511462 -117176392 + AluSq SINE Alu 1 307 -6 316 82 33 33 chr2 133511471 133511532 -117176322 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 407 297 131 0 chr2 133512117 133512292 -117175562 - MIR SINE MIR -14 248 51 2085 128 0 3 chr2 133512471 133512768 -117175086 - AluSp SINE Alu -17 296 1 720 251 15 5 chr2 133512974 133513177 -117174677 + MER3 DNA MER1_type 5 209 0 26 30 0 0 chr2 133513204 133513237 -117174617 + AT_rich Low_complexity Low_complexity 1 33 0 2100 120 0 23 chr2 133513491 133513791 -117174063 + AluSx SINE Alu 3 295 -17 312 265 12 12 chr2 133515056 133515139 -117172715 + MIR SINE MIR 34 116 -92 2460 199 101 25 chr2 133515600 133516322 -117171532 + L1M4 LINE L1 4568 5344 -802 2543 178 86 4 chr2 133516323 133517110 -117170744 + L1MB7 LINE L1 5179 6165 -19 242 229 16 16 chr2 133517114 133517175 -117170679 + L2 LINE L2 2349 2409 -905 641 211 0 16 chr2 133517567 133517695 -117170159 + MLT1J1 LTR MaLR 15 140 -306 352 282 65 32 chr2 133517743 133517867 -117169987 + MLT1J2 LTR MaLR 253 380 -70 2519 64 0 10 chr2 133518162 133518474 -117169380 + AluY SINE Alu 1 309 -2 2238 119 3 0 chr2 133518568 133518880 -117168974 + AluSq SINE Alu 1 313 0 2859 133 7 2 chr2 133519165 133519608 -117168246 + L1PB3 LINE L1 5703 6147 -7 26 30 0 0 chr2 133519608 133519641 -117168213 + AT_rich Low_complexity Low_complexity 1 33 0 594 91 0 0 chr2 133519734 133519811 -117168043 + THE1A LTR MaLR 1 77 -278 2191 100 13 13 chr2 133519839 133520149 -117167705 + THE1A LTR MaLR 46 355 0 11549 88 19 0 chr2 133520151 133521698 -117166156 + THE1A-int LTR MaLR 4 1580 0 2344 84 72 3 chr2 133521698 133522030 -117165824 + THE1A LTR MaLR 1 355 0 884 253 84 67 chr2 133522053 133522462 -117165392 - L1MEc LINE L1 -5215 1181 781 2229 128 0 0 chr2 133522462 133522774 -117165080 - AluSx SINE Alu 0 312 1 884 253 84 67 chr2 133522774 133523477 -117164377 - L1MEc LINE L1 -5615 781 45 913 239 40 4 chr2 133523520 133523746 -117164108 + MIR SINE MIR 29 262 0 644 115 29 0 chr2 133523761 133523865 -117163989 - AluY SINE Alu 0 311 205 483 239 142 29 chr2 133523921 133524012 -117163842 + MIR SINE MIR 35 114 -148 1499 210 57 0 chr2 133524012 133524293 -117163561 + AluJo SINE Alu 1 297 -15 483 239 142 29 chr2 133524293 133524406 -117163448 + MIR SINE MIR 114 262 0 2340 107 0 0 chr2 133524416 133524716 -117163138 - AluSx SINE Alu -12 300 1 884 254 95 67 chr2 133524811 133525212 -117162642 - MLT1G1 LTR MaLR -183 412 1 558 260 137 77 chr2 133526521 133526715 -117161139 + HAL1 LINE L1 918 1099 -1408 2190 92 26 13 chr2 133526715 133527019 -117160835 + AluSx SINE Alu 1 308 -4 558 260 137 77 chr2 133527019 133527190 -117160664 + HAL1 LINE L1 1099 1305 -1202 2346 286 77 61 chr2 133527191 133527824 -117160030 + L2 LINE L2 876 1497 -1817 2385 94 0 3 chr2 133527824 133528131 -117159723 - AluSq SINE Alu -7 306 1 2346 286 77 61 chr2 133528131 133528151 -117159703 + L2 LINE L2 1497 1515 -1799 2392 108 0 0 chr2 133528151 133528458 -117159396 - AluSg SINE Alu -3 307 1 2346 286 77 61 chr2 133528458 133528605 -117159249 + L2 LINE L2 1515 1658 -1656 1979 143 3 0 chr2 133528605 133528892 -117158962 - AluSx SINE Alu -24 288 1 2346 286 77 61 chr2 133528892 133529195 -117158659 + L2 LINE L2 1658 1999 -1315 2277 209 57 69 chr2 133529232 133530223 -117157631 - L1ME1 LINE L1 -6 6396 5421 1063 196 30 4 chr2 133530208 133530438 -117157416 - L1MD3 LINE L1 -219 7776 7541 * 6684 64 0 0 chr2 133530506 133530910 -117156944 - L1PA6 LINE L1 0 6154 5751 2438 97 0 0 chr2 133530910 133531219 -117156635 - AluY SINE Alu -2 309 1 6684 64 0 0 chr2 133531219 133532067 -117155787 - L1PA6 LINE L1 -402 5752 4933 356 234 32 0 chr2 133532080 133532174 -117155680 - L1MD3 LINE L1 -365 7630 7534 249 200 15 0 chr2 133532255 133532320 -117155534 - L1ME1 LINE L1 -4311 2252 2187 28 29 0 0 chr2 133532525 133532560 -117155294 + AT_rich Low_complexity Low_complexity 1 35 0 1586 245 44 34 chr2 133532586 133533177 -117154677 - L1ME1 LINE L1 -4665 1719 1123 1610 189 22 25 chr2 133533195 133533550 -117154304 - MLT1E3 LTR MaLR -1 623 270 316 299 0 0 chr2 133533570 133533637 -117154217 - Tigger2 DNA MER2_type 0 2718 2652 707 100 0 33 chr2 133533639 133533779 -117154075 - AluSg/x SINE Alu -19 291 92 616 237 5 70 chr2 133534204 133534390 -117153464 + MER5B DNA MER1_type 2 175 -3 242 227 0 0 chr2 133535115 133535159 -117152695 + MER5B DNA MER1_type 10 53 -125 310 323 180 0 chr2 133535304 133535493 -117152361 + HAL1 LINE L1 2252 2474 -33 1959 117 0 0 chr2 133535527 133535792 -117152062 - AluSq SINE Alu -10 303 39 1502 185 21 4 chr2 133535829 133536284 -117151570 - MLT2B1 LTR ERVL -4 516 5 1234 269 37 21 chr2 133536429 133536804 -117151050 - L1ME3A LINE L1 -7 6163 5778 2244 92 0 0 chr2 133536804 133537085 -117150769 + AluSg SINE Alu 10 290 -20 1234 269 37 21 chr2 133537085 133537174 -117150680 - L1ME3A LINE L1 -392 5778 5692 2476 176 6 2 chr2 133537175 133537674 -117150180 - L1PA14 LINE L1 -1393 4753 4253 6432 79 12 6 chr2 133537678 133539068 -117148786 + L1PA14 LINE L1 4746 6161 0 2151 107 0 47 chr2 133539868 133540040 -117147814 - AluSx SINE Alu -9 303 151 2175 101 7 7 chr2 133540040 133540336 -117147518 - AluSc SINE Alu -13 296 1 2151 107 0 47 chr2 133540336 133540481 -117147373 - AluSx SINE Alu -161 151 1 1496 149 18 0 chr2 133540640 133540868 -117146986 - AluJb SINE Alu -6 306 75 2211 94 3 3 chr2 133541795 133542082 -117145772 - AluSp SINE Alu -26 287 1 1154 207 97 5 chr2 133542182 133542635 -117145219 - L1ME3A LINE L1 -609 5555 5060 252 229 49 8 chr2 133542635 133542757 -117145097 + (TA)n Simple_repeat Simple_repeat 2 128 0 1462 167 7 66 chr2 133542757 133543045 -117144809 - AluJo SINE Alu -28 284 14 867 228 39 63 chr2 133543062 133543396 -117144458 - L1ME3A LINE L1 -1091 5055 4730 299 267 167 0 chr2 133543410 133543530 -117144324 - L3 LINE CR1 -187 1390 1251 1728 166 40 17 chr2 133543848 133544150 -117143704 - AluJb SINE Alu -3 309 1 2341 267 84 64 chr2 133544317 133544518 -117143336 - HAL1 LINE L1 -164 2343 2148 10977 190 19 28 chr2 133544518 133545601 -117142253 - L1PA15 LINE L1 -4 6161 5070 1916 135 62 3 chr2 133545601 133545890 -117141964 - AluSx SINE Alu -6 306 1 10977 190 19 28 chr2 133545890 133547139 -117140715 - L1PA15 LINE L1 -1095 5070 3812 432 0 0 0 chr2 133547139 133547187 -117140667 + (TA)n Simple_repeat Simple_repeat 2 49 0 2300 96 0 10 chr2 133547189 133547503 -117140351 - AluY SINE Alu 0 311 1 10977 190 19 28 chr2 133547503 133547654 -117140200 - L1PA15 LINE L1 -2354 3811 3660 198 0 0 0 chr2 133547654 133547676 -117140178 + (TTG)n Simple_repeat Simple_repeat 3 24 0 10977 190 19 28 chr2 133547676 133548491 -117139363 - L1PA15 LINE L1 -2505 3660 2859 2341 267 84 64 chr2 133548491 133549310 -117138544 - HAL1 LINE L1 -359 2148 1347 1915 159 0 0 chr2 133549310 133549600 -117138254 - AluSx SINE Alu -22 290 1 2341 267 84 64 chr2 133549600 133550413 -117137441 - HAL1 LINE L1 -1160 1347 472 796 186 42 6 chr2 133550425 133550592 -117137262 + MLT1C LTR MaLR 13 185 -282 1297 122 16 0 chr2 133550593 133550781 -117137073 - AluSc SINE Alu -2 307 117 239 220 40 148 chr2 133551680 133551903 -117135951 + HAL1 LINE L1 9 207 -2300 22 0 0 0 chr2 133552315 133552337 -117135517 + AT_rich Low_complexity Low_complexity 1 22 0 2381 90 0 0 chr2 133552375 133552674 -117135180 + AluSc SINE Alu 1 299 -10 352 303 22 0 chr2 133553725 133553814 -117134040 - MIR SINE MIR -151 111 21 31 0 0 0 chr2 133553834 133553865 -117133989 + AT_rich Low_complexity Low_complexity 1 31 0 423 0 0 0 chr2 133553902 133553949 -117133905 + (TG)n Simple_repeat Simple_repeat 2 48 0 251 269 40 34 chr2 133554080 133554229 -117133625 + L1MC/D LINE L1 5762 5911 -1897 187 91 23 45 chr2 133554235 133554279 -117133575 + (TATG)n Simple_repeat Simple_repeat 2 44 0 298 214 0 14 chr2 133554794 133554864 -117132990 - REP3 LTR ERV -41 521 453 15410 58 5 0 chr2 133555091 133557903 -117129951 + L1PA6 LINE L1 3327 6153 -1 2558 101 11 14 chr2 133558886 133559251 -117128603 - THE1B LTR MaLR 0 364 1 246 185 19 19 chr2 133559482 133559536 -117128318 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 2378 85 0 7 chr2 133559697 133560002 -117127852 + AluY SINE Alu 1 303 -8 1694 104 20 0 chr2 133560327 133560578 -117127276 + AluSc SINE Alu 1 256 -53 301 239 148 35 chr2 133560796 133560938 -117126916 + L1MC/D LINE L1 5649 5806 -2002 2301 56 0 18 chr2 133560992 133561278 -117126576 - AluY SINE Alu -29 282 2 186 283 0 0 chr2 133562363 133562416 -117125438 - L3 LINE CR1 -730 847 795 2075 149 0 0 chr2 133562416 133562724 -117125130 + AluSg SINE Alu 1 308 -2 1130 173 173 9 chr2 133562788 133563019 -117124835 - AluY SINE Alu 0 311 43 814 228 47 28 chr2 133563138 133563349 -117124505 - MER58A DNA MER1_type 0 224 10 246 295 77 13 chr2 133563875 133564031 -117123823 + MLT1J LTR MaLR 1 166 -345 2248 111 0 0 chr2 133564741 133565048 -117122806 - AluY SINE Alu -2 309 3 2179 110 10 0 chr2 133565050 133565342 -117122512 - AluSq SINE Alu -18 295 1 235 170 43 0 chr2 133565383 133565430 -117122424 - MSTB LTR MaLR 0 426 378 5746 100 2 0 chr2 133565432 133566281 -117121573 + L1P LINE L1 9 859 -5287 1152 172 142 15 chr2 133566405 133566673 -117121181 + AluJb SINE Alu 1 302 0 1424 132 28 0 chr2 133566963 133567213 -117120641 - L1MA8 LINE L1 -7 6284 6028 2317 81 17 0 chr2 133567730 133568026 -117119828 + AluSp SINE Alu 1 301 -12 1639 203 60 18 chr2 133568458 133568912 -117118942 - L1ME1 LINE L1 -6 6160 5688 202 299 149 0 chr2 133568994 133569081 -117118773 + MIR SINE MIR 44 143 -65 1795 155 10 14 chr2 133569377 133569668 -117118186 - AluJb SINE Alu -22 290 1 25 63 0 38 chr2 133569678 133569757 -117118097 + AT_rich Low_complexity Low_complexity 1 76 0 22 56 0 0 chr2 133570062 133570098 -117117756 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr2 133570384 133570410 -117117444 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr2 133571015 133571040 -117116814 + AT_rich Low_complexity Low_complexity 1 25 0 2208 104 3 3 chr2 133571040 133571337 -117116517 - AluSx SINE Alu -15 297 1 2117 82 93 0 chr2 133571846 133572126 -117115728 + AluY SINE Alu 1 306 -5 224 364 147 8 chr2 133572328 133572457 -117115397 - L2 LINE L2 -5 3267 3121 2017 28 0 0 chr2 133573029 133573284 -117114570 + L1P LINE L1 2777 3031 -3115 584 274 148 14 chr2 133573493 133573850 -117114004 - HAL1 LINE L1 -381 2126 1722 21 0 0 0 chr2 133573851 133573872 -117113982 + AT_rich Low_complexity Low_complexity 1 21 0 721 201 29 19 chr2 133573873 133574082 -117113772 - L1MC5 LINE L1 -48 7913 7703 2237 111 3 3 chr2 133574089 133574395 -117113459 - AluSc SINE Alu -3 306 1 968 86 36 0 chr2 133574407 133574546 -117113308 + L1PA10 LINE L1 6025 6168 0 22 88 0 0 chr2 133574564 133574621 -117113233 + AT_rich Low_complexity Low_complexity 1 57 0 639 115 0 0 chr2 133574658 133574754 -117113100 + L1PB1 LINE L1 6048 6143 -8 785 249 129 62 chr2 133574914 133575320 -117112534 - L1MC5 LINE L1 -385 7576 7122 2025 93 57 14 chr2 133575320 133575600 -117112254 + AluY SINE Alu 1 292 -19 785 249 129 62 chr2 133575600 133575742 -117112112 - L1MC5 LINE L1 -839 7122 6991 934 201 58 25 chr2 133575788 133576062 -117111792 - L1M4 LINE L1 -1426 4720 4438 7166 38 7 1 chr2 133576063 133576934 -117110920 + L1PA5 LINE L1 5279 6154 0 2032 113 0 62 chr2 133576946 133577266 -117110588 + AluSx SINE Alu 1 300 -12 264 157 0 133 chr2 133577818 133577901 -117109953 + L1MC/D LINE L1 5539 5610 -2385 2066 225 127 59 chr2 133577904 133577993 -117109861 + L1ME1 LINE L1 4461 4543 -1623 2174 108 24 0 chr2 133577993 133578280 -117109574 - AluSq SINE Alu -19 294 1 1867 160 0 14 chr2 133578288 133578581 -117109273 - AluJo SINE Alu -23 289 1 2066 225 127 59 chr2 133578581 133579236 -117108618 + L1ME1 LINE L1 4549 5158 -1008 2186 112 3 20 chr2 133579236 133579540 -117108314 + AluSx SINE Alu 1 299 -13 2066 225 127 59 chr2 133579540 133580243 -117107611 + L1ME1 LINE L1 5158 6027 -139 872 262 78 32 chr2 133580764 133580810 -117107044 + MER69 DNA AcHobo 12 54 -1172 1001 171 0 34 chr2 133580810 133580986 -117106868 + FAM SINE Alu 1 170 -5 872 262 78 32 chr2 133580986 133581434 -117106420 + MER69 DNA AcHobo 54 569 -657 332 215 29 58 chr2 133581422 133581594 -117106260 + MER69 DNA AcHobo 2001 2167 -359 * 890 94 132 0 chr2 133581744 133581903 -117105951 + L1MA3 LINE L1 6126 6305 0 954 179 5 26 chr2 133581918 133582108 -117105746 + AluJo SINE Alu 122 307 -5 1641 196 3 19 chr2 133582114 133582430 -117105424 + AluJo SINE Alu 1 311 -1 2445 77 0 3 chr2 133583007 133583319 -117104535 - AluY SINE Alu 0 311 1 2335 83 3 16 chr2 133583462 133583775 -117104079 - AluY SINE Alu -2 309 1 2300 108 0 0 chr2 133584456 133584752 -117103102 - AluSc SINE Alu -13 296 1 2596 65 0 0 chr2 133585162 133585472 -117102382 - AluY SINE Alu -1 310 1 817 205 0 49 chr2 133585761 133585946 -117101908 + FRAM SINE Alu 1 176 0 2060 104 7 0 chr2 133586061 133586370 -117101484 + AluSx SINE Alu 1 311 0 1782 159 45 0 chr2 133586471 133586761 -117101093 - AluJb SINE Alu -9 303 1 23 101 0 0 chr2 133586763 133586842 -117101012 + AT_rich Low_complexity Low_complexity 1 79 0 788 337 49 49 chr2 133586983 133587460 -117100394 + HAL1 LINE L1 1093 1572 -935 2003 131 0 3 chr2 133587460 133587750 -117100104 - AluSg SINE Alu -21 289 1 788 337 49 49 chr2 133587750 133587884 -117099970 + HAL1 LINE L1 1571 1704 -803 231 200 50 0 chr2 133588099 133588159 -117099695 - L2 LINE L2 -1094 2220 2158 586 185 64 17 chr2 133588162 133588335 -117099519 + L1MB2 LINE L1 5991 6171 0 343 273 11 0 chr2 133588335 133588423 -117099431 - L2 LINE L2 -1178 2136 2048 760 176 23 15 chr2 133588430 133588561 -117099293 + FLAM_C SINE Alu 2 133 0 4260 118 22 15 chr2 133588571 133589036 -117098818 + L1MA3 LINE L1 4612 5072 -1233 2249 111 0 13 chr2 133589036 133589351 -117098503 - AluSx SINE Alu -1 311 1 4260 118 22 15 chr2 133589351 133590144 -117097710 + L1MA3 LINE L1 5072 5881 -424 23595 73 7 2 chr2 133590244 133593578 -117094276 - L1P LINE L1 -2792 3354 3 9079 86 0 3 chr2 133593578 133594923 -117092931 - L1P LINE L1 -2954 3192 1852 8246 180 57 43 chr2 133595246 133595932 -117091922 - L1MC3 LINE L1 -2 7783 7108 2208 120 3 0 chr2 133595932 133596233 -117091621 - AluSx SINE Alu -8 304 3 8246 180 57 43 chr2 133596233 133596259 -117091595 - L1MC3 LINE L1 -677 7108 7084 3314 82 2 2 chr2 133596259 133596699 -117091155 - MLT2A1 LTR ERVL -4 440 1 8246 180 57 43 chr2 133596699 133598119 -117089735 - L1MC3 LINE L1 -701 7084 5617 1748 204 84 27 chr2 133598119 133598561 -117089293 - MLT1C LTR MaLR 0 467 1 8246 180 57 43 chr2 133598561 133598572 -117089282 - L1MC3 LINE L1 -2168 5617 5608 1992 94 3 38 chr2 133598576 133598748 -117089106 - AluSp SINE Alu -17 296 136 2451 65 0 0 chr2 133598748 133599042 -117088812 - AluY SINE Alu -17 294 1 1992 94 3 38 chr2 133599042 133599157 -117088697 - AluSp SINE Alu -177 136 19 587 231 41 0 chr2 133599282 133599429 -117088425 - L1MC3 LINE L1 -2173 5612 5460 1284 179 8 4 chr2 133599543 133599777 -117088077 + MLT1C LTR MaLR 229 463 -4 460 284 79 25 chr2 133599850 133600128 -117087726 - HAL1 LINE L1 -2118 389 97 1217 240 65 3 chr2 133600159 133600484 -117087370 - L2 LINE L2 -1262 2052 1708 228 111 0 0 chr2 133600733 133600769 -117087085 + (A)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr2 133602333 133602354 -117085500 + AT_rich Low_complexity Low_complexity 1 21 0 344 71 18 0 chr2 133602513 133602569 -117085285 + (TA)n Simple_repeat Simple_repeat 2 58 0 856 151 5 80 chr2 133602654 133602853 -117085001 + MER65B LTR ERV1 2 185 -346 378 117 67 0 chr2 133602846 133602906 -117084948 + MER66A LTR ERV1 275 338 -140 * 1061 167 55 73 chr2 133602930 133603205 -117084649 + MER65A LTR ERV1 172 441 -4 252 59 0 0 chr2 133603229 133603263 -117084591 + (CA)n Simple_repeat Simple_repeat 2 35 0 2585 62 0 0 chr2 133603407 133603713 -117084141 + AluY SINE Alu 6 311 0 280 345 112 0 chr2 133603855 133604052 -117083802 + L2 LINE L2 2036 2254 -1060 1261 153 5 0 chr2 133604274 133604483 -117083371 + MER2 DNA MER2_type 2 211 -134 28281 35 1 1 chr2 133604517 133608873 -117078981 - L1PA3 LINE L1 -2 6153 1797 22 0 0 0 chr2 133610139 133610161 -117077693 + AT_rich Low_complexity Low_complexity 1 22 0 6672 171 32 20 chr2 133610726 133611388 -117076466 - L1PB4 LINE L1 -11 6145 5493 1801 177 7 3 chr2 133611388 133611682 -117076172 - AluJb SINE Alu -17 295 1 6672 171 32 20 chr2 133611682 133613275 -117074579 - L1PB4 LINE L1 -663 5493 3868 2013 151 81 3 chr2 133613282 133613654 -117074200 + MSTA LTR MaLR 1 401 -27 26131 38 0 0 chr2 133613654 133617832 -117070022 - L1PA4 LINE L1 -3 6152 1842 742 147 39 0 chr2 133617946 133618075 -117069779 + THE1C LTR MaLR 242 375 0 257 225 45 56 chr2 133619898 133619987 -117067867 + MIR SINE MIR 167 254 -8 2149 131 3 0 chr2 133620313 133620604 -117067250 + AluSx SINE Alu 1 292 -20 290 248 0 50 chr2 133620778 133620879 -117066975 - MER69 DNA AcHobo 0 2526 2431 956 225 27 7 chr2 133620902 133620918 -117066936 - L1M4 LINE L1 -2981 3165 3151 2287 128 0 0 chr2 133620918 133621230 -117066624 - AluSx SINE Alu 0 312 1 956 225 27 7 chr2 133621230 133621506 -117066348 - L1M4 LINE L1 -2995 3151 2867 2489 196 44 33 chr2 133621516 133621625 -117066229 + L1MB7 LINE L1 5545 5651 -533 2184 65 41 7 chr2 133621625 133621917 -117065937 + AluY SINE Alu 1 302 -9 2489 196 44 33 chr2 133621917 133622440 -117065414 + L1MB7 LINE L1 5651 6184 0 313 252 47 16 chr2 133622503 133622630 -117065224 + L1ME LINE L1 5523 5653 -468 303 93 0 0 chr2 133622653 133622696 -117065158 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 308 296 20 46 chr2 133622747 133622807 -117065047 + L1ME LINE L1 5669 5729 -392 2422 77 0 13 chr2 133622807 133623119 -117064735 + AluY SINE Alu 1 308 -3 308 296 20 46 chr2 133623119 133623210 -117064644 + L1ME LINE L1 5729 5816 -305 1745 108 0 12 chr2 133623724 133623964 -117063890 - AluSx SINE Alu -16 296 60 205 36 0 127 chr2 133624093 133624148 -117063706 + (TTTTTA)n Simple_repeat Simple_repeat 5 52 0 615 294 58 64 chr2 133624303 133624459 -117063395 - L1MC4a LINE L1 -1850 5958 5803 2150 102 0 17 chr2 133624459 133624753 -117063101 - AluSx SINE Alu -23 289 1 615 294 58 64 chr2 133624753 133624886 -117062968 - L1MC4a LINE L1 -2005 5803 5671 479 332 19 16 chr2 133624886 133625142 -117062712 + MIR SINE MIR 3 259 -3 615 294 58 64 chr2 133625142 133625522 -117062332 - L1MC4a LINE L1 -2137 5671 5292 404 290 101 31 chr2 133625681 133625967 -117061887 + L1 LINE L1 3611 3916 -2230 2019 112 3 68 chr2 133626001 133626324 -117061530 - AluSx SINE Alu -10 302 1 231 235 0 0 chr2 133626363 133626414 -117061440 + (TA)n Simple_repeat Simple_repeat 2 52 0 802 174 0 0 chr2 133626600 133626721 -117061133 + FLAM_C SINE Alu 4 124 -19 483 78 0 0 chr2 133626869 133626933 -117060921 + AluY SINE Alu 1 64 -246 4396 159 25 47 chr2 133626933 133627936 -117059918 - MER11C LTR ERVK 0 1071 3 1615 82 30 39 chr2 133627936 133628167 -117059687 + AluY SINE Alu 57 285 -26 1985 117 0 40 chr2 133628344 133628644 -117059210 - AluSg SINE Alu -22 288 1 2323 108 0 0 chr2 133628830 133629136 -117058718 + AluSq SINE Alu 1 306 -7 242 234 0 32 chr2 133629143 133629237 -117058617 + L1P LINE L1 4956 5046 -1100 349 312 88 9 chr2 133629406 133629621 -117058233 + L1MC/D LINE L1 5315 5546 -2262 1588 153 17 34 chr2 133629646 133629803 -117058051 - AluJo SINE Alu -22 290 139 2158 109 26 0 chr2 133629803 133630105 -117057749 - AluSx SINE Alu -1 311 2 1588 153 17 34 chr2 133630105 133630242 -117057612 - AluJo SINE Alu -173 139 1 230 225 312 46 chr2 133630419 133630637 -117057217 + L1MC/D LINE L1 5649 5924 -1884 341 288 126 9 chr2 133630926 133631037 -117056817 + L2 LINE L2 3149 3272 0 251 314 133 0 chr2 133633210 133633315 -117054539 - MIR3 SINE MIR -4 204 86 1773 166 0 3 chr2 133633501 133633826 -117054028 - AluSx SINE Alu 0 324 1 211 282 165 12 chr2 133634054 133634139 -117053715 + L3 LINE CR1 488 585 -992 394 339 140 37 chr2 133634139 133634153 -117053701 + L3 LINE CR1 552 563 -1014 1065 80 20 0 chr2 133634153 133634304 -117053550 + L1PA10 LINE L1 6010 6163 -5 2295 79 0 32 chr2 133634307 133634622 -117053232 - AluSc SINE Alu -4 305 1 394 339 140 37 chr2 133634622 133634954 -117052900 + L3 LINE CR1 564 938 -639 307 358 16 8 chr2 133635024 133635147 -117052707 - L2 LINE L2 0 3272 3149 400 99 42 0 chr2 133635300 133635371 -117052483 - L1MB3 LINE L1 -1 6182 6109 844 139 32 97 chr2 133635397 133635613 -117052241 - L1MB3 LINE L1 -1 6182 5981 494 364 97 41 chr2 133635954 133636643 -117051211 - L2 LINE L2 -1863 1451 724 264 373 0 0 chr2 133636646 133636721 -117051133 + L3 LINE CR1 1085 1159 -418 313 248 43 77 chr2 133636729 133636846 -117051008 - L2 LINE L2 -4 3309 3197 649 260 41 12 chr2 133636848 133637017 -117050837 + L3 LINE CR1 1209 1382 -195 22074 71 13 6 chr2 133637355 133640704 -117047150 + L1P2 LINE L1 2317 5685 -469 1910 136 31 0 chr2 133640806 133641092 -117046762 - AluSx SINE Alu -17 295 1 1511 144 111 11 chr2 133641523 133641794 -117046060 - AluJo SINE Alu -14 298 1 2346 55 38 3 chr2 133641794 133642082 -117045772 - AluY SINE Alu -12 299 1 1206 181 77 91 chr2 133642199 133642415 -117045439 - MLT1A1 LTR MaLR 0 365 155 1886 143 35 0 chr2 133642415 133642702 -117045152 - AluSx SINE Alu -13 299 3 1206 181 77 91 chr2 133642702 133642849 -117045005 - MLT1A1 LTR MaLR -210 155 7 1710 143 84 31 chr2 133643489 133643845 -117044009 - THE1C LTR MaLR 0 375 1 2246 89 6 3 chr2 133644098 133644414 -117043440 + L1PB1 LINE L1 5834 6150 -1 186 43 0 0 chr2 133644545 133644568 -117043286 + (A)n Simple_repeat Simple_repeat 1 23 0 1493 68 15 0 chr2 133645810 133646016 -117041838 - L1MA2 LINE L1 0 6304 6096 25 0 0 0 chr2 133646987 133647012 -117040842 + AT_rich Low_complexity Low_complexity 1 25 0 45 0 0 18 chr2 133647543 133647571 -117040283 + AT_rich Low_complexity Low_complexity 1 28 -27 2318 72 0 10 chr2 133647571 133647861 -117039993 - AluY SINE Alu -24 287 1 45 0 0 18 chr2 133647861 133647888 -117039966 + AT_rich Low_complexity Low_complexity 28 55 0 1150 164 0 0 chr2 133649314 133649491 -117038363 - AluSg/x SINE Alu -13 297 121 24 32 0 0 chr2 133649492 133649523 -117038331 + AT_rich Low_complexity Low_complexity 1 31 0 2348 85 13 0 chr2 133649523 133649829 -117038025 - AluSg SINE Alu 0 310 1 1988 120 0 23 chr2 133649832 133650132 -117037722 - AluSx SINE Alu -19 293 1 618 113 0 0 chr2 133650439 133650536 -117037318 + (TTCC)n Simple_repeat Simple_repeat 2 98 0 289 196 0 0 chr2 133650537 133650593 -117037261 - AluJo SINE Alu -5 297 242 925 194 6 6 chr2 133650593 133650768 -117037086 - AluJo SINE Alu -101 211 37 193 328 33 0 chr2 133650797 133650858 -117036996 - MER5A DNA MER1_type -86 103 41 1087 144 6 0 chr2 133651258 133651418 -117036436 + FRAM SINE Alu 1 153 -23 389 248 0 51 chr2 133651574 133651691 -117036163 - L1MC4 LINE L1 0 8042 7932 738 186 8 0 chr2 133651813 133651942 -117035912 + FLAM_A SINE Alu 4 133 0 2403 90 0 0 chr2 133652380 133652681 -117035173 - AluY SINE Alu -10 301 1 1699 125 59 28 chr2 133653518 133653637 -117034217 + AluJo SINE Alu 1 115 -197 234 0 0 0 chr2 133653637 133653663 -117034191 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 1699 125 59 28 chr2 133653663 133653832 -117034022 + AluJo SINE Alu 115 298 -14 2289 78 3 0 chr2 133653866 133654173 -117033681 - AluY SINE Alu 0 308 1 2088 121 0 7 chr2 133654203 133654501 -117033353 - AluSq SINE Alu -17 296 1 1524 212 19 3 chr2 133654942 133655296 -117032558 - AluJo SINE Alu 0 359 1 1540 209 62 25 chr2 133655434 133655835 -117032019 - LTR52 LTR ERVL -2 419 4 1720 141 7 50 chr2 133656886 133657002 -117030852 + AluSx SINE Alu 1 121 -191 2204 97 10 0 chr2 133657002 133657300 -117030554 + AluSx SINE Alu 1 301 -11 1720 141 7 50 chr2 133657300 133657481 -117030373 + AluSx SINE Alu 121 285 -27 283 267 193 28 chr2 133707795 133707971 -116979883 + MIR SINE MIR 58 262 0 273 98 0 0 chr2 133709134 133709175 -116978679 + (TGGA)n Simple_repeat Simple_repeat 2 42 0 325 258 92 37 chr2 133711698 133711915 -116975939 + L1M4 LINE L1 4549 4777 -1369 * 3643 124 5 29 chr2 133711900 133712087 -116975767 + L1MA6 LINE L1 5600 5790 -510 2283 115 0 3 chr2 133712087 133712399 -116975455 + AluSx SINE Alu 1 311 -1 234 0 0 0 chr2 133712399 133712425 -116975429 + (TA)n Simple_repeat Simple_repeat 2 27 0 3643 124 5 29 chr2 133712425 133712833 -116975021 + L1MA6 LINE L1 5788 6182 -118 3617 80 10 12 chr2 133712833 133713333 -116974521 - MER11A LTR ERVK 0 1266 768 2335 91 3 0 chr2 133713433 133713729 -116974125 - AluSq SINE Alu -16 297 1 2232 114 3 0 chr2 133714695 133714993 -116972861 + AluSg SINE Alu 1 299 -11 1345 201 52 10 chr2 133715053 133715361 -116972493 + Charlie1b DNA MER1_type 37 357 -166 874 175 0 0 chr2 133715401 133715544 -116972310 + FLAM_C SINE Alu 1 143 0 1984 134 13 3 chr2 133715545 133715850 -116972004 + AluSg SINE Alu 1 308 -2 7036 193 47 39 chr2 133716063 133716714 -116971140 - L1PBa LINE L1 -2282 4580 3935 324 0 0 0 chr2 133716714 133716750 -116971104 + (TG)n Simple_repeat Simple_repeat 2 37 0 7036 193 47 39 chr2 133716750 133717097 -116970757 - L1PBa LINE L1 -2927 3935 3592 2134 121 0 0 chr2 133717097 133717394 -116970460 - AluSg SINE Alu -13 297 1 7036 193 47 39 chr2 133717394 133717461 -116970393 - L1PBa LINE L1 -3270 3592 3527 1945 171 0 0 chr2 133717461 133717760 -116970094 + AluSx SINE Alu 1 299 -13 7036 193 47 39 chr2 133717760 133718615 -116969239 - L1PBa LINE L1 -3335 3527 2646 1098 83 57 0 chr2 133718619 133718776 -116969078 - L1PBa LINE L1 -4548 2315 2150 456 172 0 21 chr2 133718776 133718869 -116968985 - AluSx SINE Alu -45 265 175 1033 98 0 0 chr2 133718869 133719002 -116968852 - AluSx SINE Alu -179 133 1 2080 130 0 13 chr2 133719024 133719323 -116968531 - AluSx SINE Alu -17 295 1 500 79 13 0 chr2 133719329 133719405 -116968449 - L1PBa LINE L1 -4708 2155 2079 234 59 20 39 chr2 133719408 133719459 -116968395 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 11964 25 1 0 chr2 133719459 133721584 -116966270 - L1PA4 LINE L1 -24 6131 4005 419 262 101 61 chr2 133721689 133721792 -116966062 - L1MC5 LINE L1 -272 7689 7592 2234 108 3 3 chr2 133721792 133722088 -116965766 + AluSx SINE Alu 2 297 -15 419 262 101 61 chr2 133722088 133722408 -116965446 - L1MC5 LINE L1 -369 7592 7249 748 153 57 0 chr2 133722682 133722806 -116965048 + AluJo SINE Alu 1 131 -171 291 167 0 0 chr2 133722810 133722852 -116965002 + AluJo SINE Alu 129 170 -132 1224 145 0 40 chr2 133722852 133723052 -116964802 + AluJb SINE Alu 100 291 -21 547 92 72 0 chr2 133723526 133723679 -116964175 + (TA)n Simple_repeat Simple_repeat 1 164 0 598 173 0 98 chr2 133723679 133723812 -116964042 - FLAM_A SINE Alu -15 127 8 2365 80 20 0 chr2 133724693 133724993 -116962861 - AluY SINE Alu -5 306 1 359 260 16 0 chr2 133725739 133725866 -116961988 + GA-rich Low_complexity Low_complexity 3 131 0 460 204 69 104 chr2 133725867 133725952 -116961902 + L1MC5 LINE L1 7702 7788 -173 2150 117 0 0 chr2 133725952 133726287 -116961567 + AluSq SINE Alu 1 335 0 460 204 69 104 chr2 133726287 133726429 -116961425 + L1MC5 LINE L1 7788 7924 -37 269 311 42 52 chr2 133727633 133727826 -116960028 + MIR SINE MIR 22 212 -50 230 289 33 50 chr2 133729002 133729123 -116958731 - L1MC4a LINE L1 -1633 6175 6057 1833 144 22 0 chr2 133729383 133729698 -116958156 - AluSx SINE Alu 0 321 1 691 140 0 10 chr2 133729722 133729822 -116958032 + AluSx SINE Alu 2 100 -213 243 224 75 47 chr2 133729831 133729913 -116957941 - L1MC4a LINE L1 -2349 5459 5372 1519 132 0 0 chr2 133729913 133730126 -116957728 + AluSx SINE Alu 95 307 -3 243 224 75 47 chr2 133730126 133730150 -116957704 - L1MC4a LINE L1 -2436 5372 5350 1427 249 53 15 chr2 133730166 133730192 -116957662 - L1MC4a LINE L1 -154 5967 5943 823 156 24 36 chr2 133730192 133730329 -116957525 - L1MB7 LINE L1 -19 6165 6029 2179 131 0 0 chr2 133730329 133730635 -116957219 + AluSx SINE Alu 1 306 -6 823 156 24 36 chr2 133730635 133730664 -116957190 - L1MB7 LINE L1 -155 6029 6001 1427 249 53 15 chr2 133730664 133731105 -116956749 - L1MC4a LINE L1 -178 5943 5479 2024 109 0 62 chr2 133731437 133731757 -116956097 - AluSx SINE Alu -12 300 1 7341 38 7 1 chr2 133731769 133732640 -116955214 - L1PA5 LINE L1 0 6154 5279 1050 209 62 26 chr2 133732627 133732934 -116954920 + L1M4 LINE L1 4421 4738 -1408 * 971 250 130 61 chr2 133732935 133733103 -116954751 + L1MC5 LINE L1 6962 7117 -844 2027 93 57 14 chr2 133733103 133733383 -116954471 - AluY SINE Alu -19 292 1 971 250 130 61 chr2 133733383 133733789 -116954065 + L1MC5 LINE L1 7117 7576 -385 691 115 0 0 chr2 133733949 133734045 -116953809 - L1PB1 LINE L1 -8 6143 6048 748 148 31 151 chr2 133734075 133734157 -116953697 + L1MC5 LINE L1 7643 7733 -228 1042 86 36 0 chr2 133734157 133734296 -116953558 - L1PA10 LINE L1 0 6168 6025 748 148 31 151 chr2 133734296 133734308 -116953546 + L1MC5 LINE L1 7733 7745 -216 2229 111 3 3 chr2 133734308 133734614 -116953240 + AluSc SINE Alu 1 306 -3 748 148 31 151 chr2 133734614 133734842 -116953012 + L1MC5 LINE L1 7745 7927 -34 704 248 137 65 chr2 133734853 133735297 -116952557 + HAL1 LINE L1 1722 2197 -310 357 253 47 112 chr2 133735325 133735495 -116952359 + MIR SINE MIR 52 210 -52 267 265 93 7 chr2 133735500 133735651 -116952203 + L1ME4a LINE L1 5778 5941 -180 8182 27 0 2 chr2 133735754 133737051 -116950803 - L1PA4 LINE L1 0 6155 4860 293 104 0 42 chr2 133737152 133737200 -116950654 - Alu SINE Alu -254 46 1 550 134 12 0 chr2 133737414 133737485 -116950369 + AluJ/FLAM SINE Alu 2 76 -236 1613 157 4 8 chr2 133737485 133737747 -116950107 + AluJb SINE Alu 42 302 -10 1697 172 10 10 chr2 133739505 133739801 -116948053 + AluJb SINE Alu 1 296 -16 1674 157 18 18 chr2 133740877 133741179 -116946675 + AluJo SINE Alu 1 302 0 923 232 57 19 chr2 133741632 133741843 -116946011 + MER20 DNA MER1_type 1 219 0 1786 154 17 3 chr2 133742074 133742372 -116945482 + AluJb SINE Alu 11 312 0 25 0 0 0 chr2 133742372 133742397 -116945457 + AT_rich Low_complexity Low_complexity 1 25 0 1592 206 0 0 chr2 133742399 133742685 -116945169 + AluJo SINE Alu 1 286 -26 247 261 23 23 chr2 133742852 133742940 -116944914 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 31 26 0 0 chr2 133743200 133743238 -116944616 + AT_rich Low_complexity Low_complexity 1 38 0 222 344 11 0 chr2 133743268 133743358 -116944496 - L2 LINE L2 -595 2719 2629 2118 182 153 31 chr2 133743361 133743910 -116943944 - MLT1E3 LTR MaLR -8 616 1 372 279 40 60 chr2 133744072 133744273 -116943581 + HAL1 LINE L1 180 376 -2131 809 286 107 39 chr2 133744286 133744670 -116943184 + HAL1 LINE L1 449 858 -1649 235 264 42 14 chr2 133745464 133745536 -116942318 + L1M LINE L1 5351 5424 -2384 546 277 45 58 chr2 133746055 133746434 -116941420 - L1ME4a LINE L1 -209 5912 5539 2176 96 0 40 chr2 133746621 133746924 -116940930 - AluSx SINE Alu -13 299 9 2005 112 4 0 chr2 133747281 133747549 -116940305 + AluSq SINE Alu 35 303 -10 2164 88 0 14 chr2 133748703 133749016 -116938838 + AluY SINE Alu 1 309 0 783 211 0 0 chr2 133750344 133750472 -116937382 + FLAM_A SINE Alu 1 128 -5 22 0 0 0 chr2 133751064 133751086 -116936768 + AT_rich Low_complexity Low_complexity 1 22 0 2242 84 0 14 chr2 133751611 133751926 -116935928 + AluY SINE Alu 1 311 0 2251 83 0 4 chr2 133751936 133752214 -116935640 + AluSq SINE Alu 28 304 -9 273 174 0 0 chr2 133753525 133753571 -116934283 - MER3 DNA MER1_type 0 2624 2579 3090 163 57 23 chr2 133753576 133753741 -116934113 - L1MB3 LINE L1 -31 6388 6230 2660 108 54 45 chr2 133753741 133754091 -116933763 + MSTA LTR MaLR 1 357 -71 2117 84 70 0 chr2 133754091 133754377 -116933477 - AluSq SINE Alu -7 306 1 2660 108 54 45 chr2 133754377 133754450 -116933404 + MSTA LTR MaLR 357 428 0 3090 163 57 23 chr2 133754450 133754886 -116932968 - L1MB3 LINE L1 -189 6230 5767 7667 203 27 19 chr2 133754987 133755690 -116932164 - L1MB3 LINE L1 -834 5548 4852 2098 146 125 18 chr2 133755690 133755729 -116932125 - MSTB LTR MaLR 0 426 393 2345 91 7 3 chr2 133755729 133756037 -116931817 + AluSp SINE Alu 1 309 -4 2098 146 125 18 chr2 133756037 133756382 -116931472 - MSTB LTR MaLR -33 393 1 7667 203 27 19 chr2 133756382 133757355 -116930499 - L1MB3 LINE L1 -1530 4852 3855 1719 103 5 0 chr2 133757355 133757579 -116930275 + AluSg/x SINE Alu 83 307 -5 7667 203 27 19 chr2 133757579 133757631 -116930223 - L1MB3 LINE L1 -2527 3855 3805 4557 163 125 25 chr2 133757606 133757666 -116930188 - L1MB3 LINE L1 -4238 2146 2093 * 2242 120 3 0 chr2 133757666 133757975 -116929879 + AluSx SINE Alu 3 312 0 4557 163 125 25 chr2 133757975 133758912 -116928942 - L1MB3 LINE L1 -4291 2093 1049 1921 122 13 43 chr2 133758916 133759074 -116928780 - AluSx SINE Alu -17 295 149 2278 4 0 20 chr2 133759074 133759347 -116928507 - L1PA2 LINE L1 0 6155 5909 1921 122 13 43 chr2 133759347 133759492 -116928362 - AluSx SINE Alu -163 149 1 4820 171 49 50 chr2 133759498 133759869 -116927985 - L1MB3 LINE L1 -5339 1045 675 2273 101 0 25 chr2 133759869 133760187 -116927667 - AluSg SINE Alu 0 310 1 4820 171 49 50 chr2 133760187 133760833 -116927021 - L1MB3 LINE L1 -5709 675 29 831 179 134 9 chr2 133760833 133761057 -116926797 - MER3 DNA MER1_type 0 2603 2352 315 140 0 0 chr2 133761055 133761105 -116926749 - MER3 DNA MER1_type -9 200 151 * 412 128 277 0 chr2 133761208 133761302 -116926552 - MER3 DNA MER1_type -52 157 38 2115 102 0 7 chr2 133761398 133761682 -116926172 - AluSx SINE Alu -30 282 1 647 292 90 63 chr2 133762203 133762231 -116925623 + L1ME3A LINE L1 5415 5441 -729 1929 134 7 3 chr2 133762231 133762522 -116925332 + AluSx SINE Alu 1 292 -20 647 292 90 63 chr2 133762522 133763014 -116924840 + L1ME3A LINE L1 5441 5949 -221 1829 162 3 16 chr2 133763022 133763330 -116924524 + AluJb SINE Alu 1 304 -8 1794 152 0 24 chr2 133763410 133763706 -116924148 + AluJo SINE Alu 12 300 -12 2440 60 0 44 chr2 133763710 133764026 -116923828 + AluY SINE Alu 3 304 -7 2318 113 3 0 chr2 133767203 133767513 -116920341 - AluSx SINE Alu -1 311 1 502 289 98 4 chr2 133767745 133768011 -116919843 - L1ME3A LINE L1 -225 5945 5655 886 161 40 0 chr2 133768015 133768164 -116919690 - MER5A DNA MER1_type -14 175 21 938 294 23 23 chr2 133768164 133768548 -116919306 - L1ME3A LINE L1 -501 5661 5278 477 283 48 75 chr2 133768643 133768679 -116919175 - L1ME3A LINE L1 -924 5222 5187 2428 71 0 0 chr2 133768679 133768973 -116918881 - AluY SINE Alu -17 294 1 477 283 48 75 chr2 133768973 133769375 -116918479 - L1ME3A LINE L1 -959 5187 4796 1457 130 123 56 chr2 133769394 133769538 -116918316 - AluJo SINE Alu -9 303 170 1752 158 72 0 chr2 133769538 133769829 -116918025 - AluJb SINE Alu 0 312 1 1457 130 123 56 chr2 133769829 133769968 -116917886 - AluJo SINE Alu -142 170 1 830 68 51 0 chr2 133769973 133770090 -116917764 - L1MA6 LINE L1 0 6300 6178 1906 21 46 0 chr2 133770091 133770371 -116917483 + MER11A LTR ERVK 1 387 -879 17319 67 15 9 chr2 133770499 133772829 -116915025 - L1P LINE L1 -1485 4661 2317 632 260 41 12 chr2 133773167 133773336 -116914518 - L3 LINE CR1 -195 1382 1209 295 248 43 77 chr2 133773338 133773455 -116914399 + L2 LINE L2 3197 3309 -4 258 373 0 0 chr2 133773463 133773538 -116914316 - L3 LINE CR1 -418 1159 1085 447 364 97 41 chr2 133773541 133774230 -116913624 + L2 LINE L2 724 1451 -1863 874 139 32 97 chr2 133774571 133774787 -116913067 + L1MB3 LINE L1 5981 6182 -1 429 99 42 0 chr2 133774813 133774884 -116912970 + L1MB3 LINE L1 6109 6182 -1 296 358 16 8 chr2 133775037 133775160 -116912694 + L2 LINE L2 3149 3272 0 362 333 172 18 chr2 133775230 133775509 -116912345 - L3 LINE CR1 -639 938 617 26 0 0 0 chr2 133775536 133775562 -116912292 + AT_rich Low_complexity Low_complexity 1 26 0 2319 79 0 32 chr2 133775562 133775880 -116911974 + AluSc SINE Alu 1 308 0 1146 80 20 0 chr2 133775880 133776031 -116911823 - L1PA10 LINE L1 -5 6163 6010 235 306 143 10 chr2 133776032 133776130 -116911724 - L3 LINE CR1 -979 598 488 1787 166 0 3 chr2 133776358 133776641 -116911213 + AluSx SINE Alu 1 324 0 306 24 24 0 chr2 133776641 133776683 -116911171 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 251 314 133 0 chr2 133776869 133776974 -116910880 + MIR3 SINE MIR 86 204 -4 341 288 126 9 chr2 133779147 133779258 -116908596 - L2 LINE L2 0 3272 3149 345 252 289 23 chr2 133779547 133779765 -116908089 - L1MC4a LINE L1 -1884 5924 5649 1608 153 17 34 chr2 133779942 133780079 -116907775 + AluJo SINE Alu 1 139 -173 2174 109 26 0 chr2 133780079 133780381 -116907473 + AluSx SINE Alu 2 311 -1 1608 153 17 34 chr2 133780381 133780538 -116907316 + AluJo SINE Alu 139 290 -22 304 312 88 9 chr2 133780563 133780778 -116907076 - L1MC4a LINE L1 -2262 5546 5315 264 157 0 133 chr2 133781120 133781203 -116906651 + L1MC/D LINE L1 5539 5610 -2432 2066 224 127 59 chr2 133781206 133781295 -116906559 + L1ME1 LINE L1 4461 4543 -1623 2139 108 24 3 chr2 133781295 133781583 -116906271 - AluSq SINE Alu -19 294 1 1867 160 0 14 chr2 133781591 133781884 -116905970 - AluJo SINE Alu -23 289 1 2066 224 127 59 chr2 133781884 133782539 -116905315 + L1ME1 LINE L1 4549 5158 -1008 2186 112 3 20 chr2 133782539 133782843 -116905011 + AluSx SINE Alu 1 299 -13 2066 224 127 59 chr2 133782843 133783546 -116904308 + L1ME1 LINE L1 5158 6027 -139 872 262 78 32 chr2 133784067 133784113 -116903741 + MER69 DNA AcHobo 12 54 -1172 1001 171 0 34 chr2 133784113 133784289 -116903565 + FAM SINE Alu 1 170 -5 872 262 78 32 chr2 133784289 133784737 -116903117 + MER69 DNA AcHobo 54 569 -657 * 936 213 102 26 chr2 133784725 133785148 -116902706 + MER69 DNA AcHobo 2001 2455 -71 298 214 0 14 chr2 133785143 133785213 -116902641 + REP3 LTR ERV 453 521 -41 * 187 91 23 45 chr2 133785728 133785772 -116902082 + (CATA)n Simple_repeat Simple_repeat 2 44 0 251 269 40 34 chr2 133785778 133785927 -116901927 - L1MC/D LINE L1 -1897 5911 5762 423 0 0 0 chr2 133786058 133786105 -116901749 + (CA)n Simple_repeat Simple_repeat 2 48 0 31 0 0 0 chr2 133786142 133786173 -116901681 + AT_rich Low_complexity Low_complexity 1 31 0 352 303 22 0 chr2 133786193 133786282 -116901572 + MIR SINE MIR 21 111 -151 2381 90 0 0 chr2 133787333 133787632 -116900222 - AluSc SINE Alu -10 299 1 22 0 0 0 chr2 133787670 133787692 -116900162 + AT_rich Low_complexity Low_complexity 1 22 0 239 220 40 148 chr2 133788104 133788327 -116899527 - HAL1 LINE L1 -2300 207 9 2198 76 6 60 chr2 133789252 133789568 -116898286 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr2 133790003 133790024 -116897830 + AT_rich Low_complexity Low_complexity 1 21 0 2360 80 3 3 chr2 133790153 133790452 -116897402 + AluSp SINE Alu 1 299 -14 1105 134 0 6 chr2 133790947 133791111 -116896743 - AluSg/x SINE Alu -13 299 137 2080 134 3 16 chr2 133791268 133791581 -116896273 - AluSx SINE Alu 0 312 4 257 151 19 0 chr2 133791903 133791956 -116895898 - L1ME1 LINE L1 -6 6160 6107 805 197 21 0 chr2 133791959 133792206 -116895648 + FRAM SINE Alu 2 251 0 1302 217 23 0 chr2 133792206 133792515 -116895339 - L1ME1 LINE L1 -46 6120 5805 935 194 0 28 chr2 133792558 133792738 -116895116 - AluJo SINE Alu -20 292 118 1582 248 63 8 chr2 133792741 133793446 -116894408 - L1ME1 LINE L1 -406 5760 5018 510 220 92 36 chr2 133793448 133793768 -116894086 + Tigger3(Golem) DNA MER2_type 1 3028 -1 2220 226 88 37 chr2 133793873 133794081 -116893773 - L1ME1 LINE L1 -1201 4945 4749 2356 103 0 0 chr2 133794081 133794382 -116893472 + AluSx SINE Alu 1 301 -11 2220 226 88 37 chr2 133794382 133795037 -116892817 - L1ME1 LINE L1 -1397 4749 4028 2452 67 0 3 chr2 133795037 133795336 -116892518 + AluY SINE Alu 1 298 -13 2220 226 88 37 chr2 133795336 133795413 -116892441 - L1ME1 LINE L1 -2118 4028 3956 343 258 0 0 chr2 133795411 133795504 -116892350 + L1MCc LINE L1 190 282 -6141 * 700 185 0 44 chr2 133795555 133795690 -116892164 + FLAM_C SINE Alu 4 132 -1 258 206 16 16 chr2 133795781 133795844 -116892010 + L1MCc LINE L1 346 408 -6015 2179 258 58 33 chr2 133796000 133796909 -116890945 + L1MCc LINE L1 649 1583 -4889 1671 197 3 14 chr2 133796952 133797242 -116890612 + AluJo SINE Alu 1 287 -25 200 35 35 0 chr2 133797246 133797275 -116890579 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 925 123 0 8 chr2 133797297 133797427 -116890427 + AluSq/x SINE Alu 6 134 -179 2141 134 0 3 chr2 133797428 133797726 -116890128 + AluSx SINE Alu 1 297 -15 2509 62 0 16 chr2 133797726 133798033 -116889821 + AluY SINE Alu 1 302 -9 4337 153 31 13 chr2 133798044 133799047 -116888807 + L1M4 LINE L1 2053 3070 -3778 1950 116 63 3 chr2 133799058 133799343 -116888511 + AluSx SINE Alu 1 302 -10 2389 263 83 19 chr2 133799385 133801189 -116886665 + L1M4 LINE L1 3955 5935 -913 325 214 102 61 chr2 133801202 133801398 -116886456 - HAL1 LINE L1 -297 2210 2007 2344 90 0 3 chr2 133801494 133801793 -116886061 + AluSg SINE Alu 1 298 -12 489 347 74 57 chr2 133802368 133802774 -116885080 - L2 LINE L2 -4 3268 2856 1182 168 15 25 chr2 133802774 133802832 -116885022 + AluJo SINE Alu 73 130 -182 2255 125 0 0 chr2 133802832 133803136 -116884718 + AluSq SINE Alu 1 304 -9 1182 168 15 25 chr2 133803136 133803280 -116884574 + AluJo SINE Alu 130 273 -39 468 335 83 28 chr2 133803428 133803753 -116884101 - L2 LINE L2 -586 2728 2386 252 324 59 71 chr2 133804249 133804419 -116883435 - L3b LINE CR1 -30 1553 1386 9197 112 59 16 chr2 133804725 133806077 -116881777 + L1PBa LINE L1 439 1869 -4994 1934 150 7 0 chr2 133806077 133806370 -116881484 - AluSx SINE Alu -17 295 1 9197 112 59 16 chr2 133806370 133806602 -116881252 + L1PBa LINE L1 1869 2090 -4773 35386 47 6 1 chr2 133806605 133811221 -116876633 + L1P LINE L1 15 4652 -1494 4025 178 6 20 chr2 133811556 133812680 -116875174 + L1P5 LINE L1 4384 5492 -659 2066 141 0 3 chr2 133812680 133812979 -116874875 + AluSx SINE Alu 1 298 -14 1369 89 5 10 chr2 133812979 133813182 -116874672 + L1PB1 LINE L1 5948 6149 -2 2345 103 3 0 chr2 133814115 133814425 -116873429 + AluSp SINE Alu 2 312 -1 2440 69 3 0 chr2 133814488 133814794 -116873060 + AluY SINE Alu 1 307 -4 1103 242 24 8 chr2 133814940 133815188 -116872666 - MIR SINE MIR 0 262 11 969 146 0 19 chr2 133815265 133815423 -116872431 - AluJb SINE Alu -22 290 136 2188 99 0 26 chr2 133815627 133815929 -116871925 - AluSc SINE Alu -15 294 1 1913 170 0 0 chr2 133815961 133816255 -116871599 - AluJb SINE Alu -18 294 1 1887 175 28 31 chr2 133817152 133817575 -116870279 + L1MB8 LINE L1 5751 6172 -6 228 268 56 0 chr2 133817811 133817882 -116869972 - MLT1L LTR MaLR -425 190 116 1784 177 98 41 chr2 133818026 133818467 -116869387 - MER31B LTR ERV1 0 466 1 2253 104 10 7 chr2 133818664 133818972 -116868882 - AluSp SINE Alu -4 309 1 2441 221 114 76 chr2 133820129 133821308 -116866546 - HAL1 LINE L1 -110 2397 1159 2389 94 7 0 chr2 133821308 133821615 -116866239 - AluSx SINE Alu -3 309 1 2441 221 114 76 chr2 133821615 133821798 -116866056 - HAL1 LINE L1 -1348 1159 984 1767 250 78 48 chr2 133821818 133822565 -116865289 - HAL1 LINE L1 -1627 880 112 21 0 0 0 chr2 133823759 133823780 -116864074 + AT_rich Low_complexity Low_complexity 1 21 0 5902 57 8 16 chr2 133823879 133824637 -116863217 + SVA Other Other 635 1386 0 26 0 0 0 chr2 133824637 133824663 -116863191 + AT_rich Low_complexity Low_complexity 1 26 0 2382 74 7 10 chr2 133825421 133825718 -116862136 + AluSp SINE Alu 1 296 -17 2272 77 10 10 chr2 133826044 133826355 -116861499 - AluY SINE Alu 0 311 1 2029 62 4 4 chr2 133826583 133826842 -116861012 + AluY SINE Alu 41 299 -12 344 264 57 19 chr2 133827061 133827167 -116860687 - L2 LINE L2 -5 3308 3199 576 253 113 18 chr2 133827938 133828337 -116859517 - MLT1J LTR MaLR -8 503 1 2175 107 0 36 chr2 133830790 133831098 -116856756 + AluSx SINE Alu 1 297 -15 1897 142 45 23 chr2 133831117 133831470 -116856384 - MLT1A1 LTR MaLR -4 361 1 2178 109 44 106 chr2 133831674 133832125 -116855729 + MSTC LTR MaLR 1 423 -5 2381 135 137 38 chr2 133832135 133832476 -116855378 - MER4D LTR ERV1 -10 756 409 2289 91 0 7 chr2 133832476 133832772 -116855082 - AluSg SINE Alu -16 294 1 2381 135 137 38 chr2 133832772 133833045 -116854809 - MER4D LTR ERV1 -357 409 164 2010 113 18 0 chr2 133833046 133833328 -116854526 - AluSx SINE Alu -24 288 2 560 122 0 0 chr2 133833328 133833418 -116854436 - MER4B LTR ERV1 -520 90 1 335 284 119 40 chr2 133833925 133834208 -116853646 + L1ME3A LINE L1 5024 5342 -804 2061 133 0 26 chr2 133834208 133834516 -116853338 + AluSx SINE Alu 1 300 -12 335 284 119 40 chr2 133834516 133834584 -116853270 + L1ME3A LINE L1 5342 5403 -743 1257 233 85 42 chr2 133834598 133834756 -116853098 - L1MC4 LINE L1 -708 7334 7184 2272 110 3 3 chr2 133834756 133835066 -116852788 - AluSg SINE Alu 0 310 1 1257 233 85 42 chr2 133835066 133835168 -116852686 - L1MC4 LINE L1 -858 7184 7088 2023 117 3 45 chr2 133835168 133835476 -116852378 + AluSx SINE Alu 1 295 -17 1257 233 85 42 chr2 133835476 133835811 -116852043 - L1MC4 LINE L1 -954 7088 6712 417 294 45 10 chr2 133835805 133836022 -116851832 + L1ME3A LINE L1 5649 5874 -296 * 27 29 0 0 chr2 133836373 133836407 -116851447 + AT_rich Low_complexity Low_complexity 1 34 0 1630 198 3 22 chr2 133836446 133836759 -116851095 - AluJo SINE Alu -5 307 1 23 78 0 0 chr2 133836843 133836894 -116850960 + AT_rich Low_complexity Low_complexity 1 51 0 2143 129 6 3 chr2 133837067 133837378 -116850476 - AluSx SINE Alu 0 312 1 24 0 0 0 chr2 133837446 133837470 -116850384 + AT_rich Low_complexity Low_complexity 1 24 0 185 77 19 58 chr2 133838256 133838308 -116849546 + (TA)n Simple_repeat Simple_repeat 1 50 0 352 112 24 59 chr2 133838336 133838505 -116849349 + (TA)n Simple_repeat Simple_repeat 2 164 0 285 171 0 47 chr2 133838560 133838689 -116849165 + (TA)n Simple_repeat Simple_repeat 2 124 0 2352 82 3 13 chr2 133839538 133839844 -116848010 + AluSp SINE Alu 1 303 -10 1456 159 90 31 chr2 133839935 133840224 -116847630 + AluJo SINE Alu 1 306 -6 24 0 0 0 chr2 133840507 133840531 -116847323 + AT_rich Low_complexity Low_complexity 1 24 0 1242 210 43 10 chr2 133840657 133840962 -116846892 - MER61A LTR ERV1 -28 315 1 255 226 16 0 chr2 133841034 133841096 -116846758 - MIR SINE MIR 0 262 200 807 169 0 0 chr2 133841131 133841249 -116846605 - FLAM_C SINE Alu -25 118 1 513 253 111 25 chr2 133841255 133841417 -116846437 - MIR SINE MIR -70 192 17 187 244 0 0 chr2 133841447 133841488 -116846366 + L2 LINE L2 3269 3309 -4 3291 153 56 39 chr2 133841594 133841947 -116845907 + L1MB7 LINE L1 5416 5761 -423 3683 145 11 20 chr2 133841947 133842588 -116845266 - MER41B LTR ERV1 0 635 1 3291 153 56 39 chr2 133842588 133842630 -116845224 + L1MB7 LINE L1 5761 5801 -383 2192 123 3 0 chr2 133842630 133842931 -116844923 + AluSx SINE Alu 3 304 -8 3291 153 56 39 chr2 133842931 133843109 -116844745 + L1MB7 LINE L1 5801 5974 -210 1568 155 97 72 chr2 133843109 133843127 -116844727 - LTR54B LTR ERV1 -2 496 480 1490 143 0 5 chr2 133843127 133843343 -116844511 + AluJb SINE Alu 87 301 -11 1568 155 97 72 chr2 133843343 133843377 -116844477 - LTR54B LTR ERV1 -18 480 448 1559 160 26 39 chr2 133843377 133843689 -116844165 - AluJo SINE Alu -4 308 1 1568 155 97 72 chr2 133843689 133843961 -116843893 - LTR54B LTR ERV1 -50 448 153 300 27 0 0 chr2 133843961 133843998 -116843856 + (TG)n Simple_repeat Simple_repeat 2 38 0 1568 155 97 72 chr2 133843998 133844155 -116843699 - LTR54B LTR ERV1 -345 153 1 3291 153 56 39 chr2 133844155 133844205 -116843649 + L1MB7 LINE L1 5974 6022 -162 2265 103 0 7 chr2 133844205 133844506 -116843348 + AluSg SINE Alu 1 299 -11 3291 153 56 39 chr2 133844506 133844629 -116843225 + L1MB7 LINE L1 6022 6178 -6 1126 148 0 0 chr2 133844630 133844792 -116843062 - AluSg/x SINE Alu -17 293 132 266 371 76 49 chr2 133844962 133845395 -116842459 - L2 LINE L2 -181 3091 2644 1387 156 10 117 chr2 133845428 133845812 -116842042 + MER7A DNA MER2_type 1 341 -5 200 235 12 99 chr2 133846548 133846629 -116841225 - L2 LINE L2 -916 2398 2325 6123 87 8 38 chr2 133846899 133847130 -116840724 - L1PA14 LINE L1 -3 6158 5921 2550 77 11 41 chr2 133847130 133847192 -116840662 - THE1A LTR MaLR 0 355 293 2339 104 3 0 chr2 133847192 133847500 -116840354 - AluSg SINE Alu 0 310 2 2550 77 11 41 chr2 133847500 133847803 -116840051 - THE1A LTR MaLR -62 293 1 11829 86 11 1 chr2 133847803 133849366 -116838488 - THE1A-int LTR MaLR 0 1580 1 2565 98 3 8 chr2 133849366 133849723 -116838131 - THE1A LTR MaLR 0 355 1 6123 87 8 38 chr2 133849723 133850328 -116837526 - L1PA14 LINE L1 -238 5923 5337 1747 189 0 0 chr2 133850328 133850630 -116837224 - AluSx SINE Alu 0 302 1 6123 87 8 38 chr2 133850630 133850942 -116836912 - L1PA14 LINE L1 -824 5337 5017 3301 157 12 21 chr2 133850942 133851655 -116836199 - L1PA12 LINE L1 -5876 1705 455 1069 190 15 5 chr2 133853015 133853215 -116834639 + AluSg/x SINE Alu 97 298 -12 2061 112 3 7 chr2 133854019 133854343 -116833511 - AluSx SINE Alu 0 323 1 718 174 7 29 chr2 133854343 133854481 -116833373 - AluSq/x SINE Alu -177 135 1 21 0 0 0 chr2 133854538 133854559 -116833295 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 133854670 133854692 -116833162 + AT_rich Low_complexity Low_complexity 1 22 0 1792 181 0 3 chr2 133854747 133855045 -116832809 + AluJo SINE Alu 1 297 -15 2074 96 38 10 chr2 133855141 133855433 -116832421 - AluSg SINE Alu -10 300 1 765 234 179 60 chr2 133855478 133856080 -116831774 + HAL1 LINE L1 656 1344 -1163 649 152 38 30 chr2 133856080 133856212 -116831642 + FLAM_A SINE Alu 1 133 0 765 234 179 60 chr2 133856212 133856270 -116831584 + HAL1 LINE L1 1344 1394 -1113 1929 144 7 0 chr2 133856477 133856769 -116831085 - AluSx SINE Alu -18 294 1 669 259 128 48 chr2 133857116 133857787 -116830067 + HAL1 LINE L1 837 1580 -927 1900 170 0 3 chr2 133857787 133858075 -116829779 + AluJb SINE Alu 1 287 -25 669 259 128 48 chr2 133858075 133858176 -116829678 + HAL1 LINE L1 1580 1671 -836 1442 156 122 11 chr2 133858343 133858606 -116829248 - AluJo SINE Alu -10 292 1 2088 128 14 0 chr2 133858671 133858960 -116828894 - AluSg SINE Alu -17 293 1 816 161 126 22 chr2 133859251 133859474 -116828380 - L1MB4 LINE L1 0 6180 5935 1682 236 53 92 chr2 133859569 133860002 -116827852 - MLT1G1 LTR MaLR 0 595 192 1771 122 111 4 chr2 133860002 133860273 -116827581 + AluSq SINE Alu 1 300 -13 1682 236 53 92 chr2 133860273 133860458 -116827396 - MLT1G1 LTR MaLR -403 192 1 1763 46 81 3 chr2 133860718 133861001 -116826853 - L1PA4 LINE L1 -1 6154 5850 1067 239 42 11 chr2 133861104 133861388 -116826466 - LTR10B-int LTR ERV1 -6352 297 5 1294 261 57 29 chr2 133861388 133861879 -116825975 - LTR10B LTR ERV1 0 505 1 1663 169 27 38 chr2 133861879 133862247 -116825607 - HUERS-P1 LTR ERV1 -5625 638 275 260 0 57 0 chr2 133862374 133862409 -116825445 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 2033 147 0 3 chr2 133862412 133862704 -116825150 - AluSx SINE Alu -17 295 5 299 98 0 0 chr2 133863269 133863361 -116824493 + Alu SINE Alu 242 333 0 1096 251 107 35 chr2 133864052 133864559 -116823295 - L1MEc LINE L1 -4603 1793 1251 6626 75 24 17 chr2 133864567 133865640 -116822214 - SVA Other Other -795 1386 400 259 266 106 20 chr2 133866084 133866283 -116821571 + L1MEc LINE L1 1861 2076 -4320 2044 95 61 7 chr2 133866453 133866747 -116821107 + AluSq SINE Alu 1 310 -3 3017 223 24 15 chr2 133867102 133868069 -116819785 - L1P4 LINE L1 -684 5484 4502 317 273 22 22 chr2 133868100 133868239 -116819615 - L1ME LINE L1 -339 5782 5644 2340 75 3 16 chr2 133868318 133868626 -116819228 - AluY SINE Alu -7 304 1 312 190 13 0 chr2 133868626 133868705 -116819149 - L1ME LINE L1 -806 5368 5289 1827 174 0 3 chr2 133868885 133869178 -116818676 - AluJo SINE Alu -19 293 2 28 29 0 0 chr2 133870028 133870063 -116817791 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr2 133871560 133871580 -116816274 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 306 0 0 0 chr2 133871579 133871613 -116816241 + (CA)n Simple_repeat Simple_repeat 1 34 0 730 277 103 7 chr2 133872186 133872486 -116815368 + MER57B LTR ERV1 66 394 -40 1810 117 11 46 chr2 133872487 133872768 -116815086 - AluSx SINE Alu -15 297 27 2214 114 0 7 chr2 133872952 133873249 -116814605 - AluSx SINE Alu -17 295 1 715 173 0 0 chr2 133873271 133873398 -116814456 + Charlie1 DNA MER1_type 2634 2760 -1 734 251 68 51 chr2 133873528 133873648 -116814206 - MIR SINE MIR -6 256 140 784 65 0 0 chr2 133873648 133873756 -116814098 - L1MA3 LINE L1 0 6305 6198 734 251 68 51 chr2 133873756 133873870 -116813984 - MIR SINE MIR -122 140 18 314 303 25 41 chr2 133874327 133874449 -116813405 + L3b LINE CR1 1282 1401 -182 587 200 289 5 chr2 133874720 133874910 -116812944 - MIR SINE MIR 0 262 19 2308 221 39 26 chr2 133875085 133875706 -116812148 + HsTC2c DNA Tc2 35 663 -66 26 64 0 0 chr2 133877638 133877685 -116810169 + AT_rich Low_complexity Low_complexity 1 47 0 512 247 51 34 chr2 133877741 133877919 -116809935 - L2 LINE L2 0 3313 3133 488 245 328 8 chr2 133878082 133878335 -116809519 - L2 LINE L2 -543 2771 2438 28 29 0 0 chr2 133878388 133878423 -116809431 + AT_rich Low_complexity Low_complexity 1 35 0 2742 10 0 0 chr2 133878989 133879289 -116808565 - AluY SINE Alu -11 300 1 186 103 0 0 chr2 133880699 133880728 -116807126 + (TA)n Simple_repeat Simple_repeat 2 30 0 510 212 116 27 chr2 133880753 133880899 -116806955 - MIR SINE MIR -8 254 96 1652 160 6 84 chr2 133881100 133881432 -116806422 + AluJb SINE Alu 1 306 -6 27977 53 5 1 chr2 133881433 133885124 -116802730 + L1P LINE L1 1 3703 -2443 1351 203 12 40 chr2 133885609 133885934 -116801920 + MER82 DNA MER2_type 8 323 -330 33 25 0 0 chr2 133887417 133887457 -116800397 + AT_rich Low_complexity Low_complexity 1 40 0 1363 227 96 29 chr2 133887457 133888008 -116799846 + L1MC4 LINE L1 7455 8042 0 3619 58 6 2 chr2 133888567 133889036 -116798818 - SVA Other Other -914 472 2 237 65 0 0 chr2 133889037 133889068 -116798786 + (GGGAGA)n Simple_repeat Simple_repeat 1 31 0 1042 293 92 15 chr2 133889078 133889325 -116798529 - L1M4 LINE L1 -4974 1568 1341 1623 165 11 18 chr2 133889325 133889507 -116798347 - AluSx SINE Alu 0 310 129 306 0 0 0 chr2 133889507 133889541 -116798313 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1623 165 11 18 chr2 133889541 133889670 -116798184 - AluSx SINE Alu -181 129 1 1042 293 92 15 chr2 133889670 133890070 -116797784 - L1M4 LINE L1 -5201 1341 870 363 272 51 74 chr2 133890113 133890330 -116797524 - L1M4 LINE L1 -5656 886 675 2118 120 7 3 chr2 133890904 133891205 -116796649 + AluSx SINE Alu 1 302 -10 2133 90 28 3 chr2 133891217 133891505 -116796349 - AluSg SINE Alu -13 297 3 1732 181 69 75 chr2 133891758 133892266 -116795588 - MLT1D LTR MaLR 0 505 1 298 325 17 26 chr2 133893267 133893384 -116794470 + L2 LINE L2 2976 3091 -181 238 304 44 32 chr2 133893664 133893822 -116794032 + L1ME1 LINE L1 12 171 -5948 2152 218 65 72 chr2 133894519 133894764 -116793090 + L1ME1 LINE L1 3493 3738 -2391 363 44 0 0 chr2 133894764 133894809 -116793045 + (CA)n Simple_repeat Simple_repeat 2 46 0 2152 218 65 72 chr2 133894809 133895568 -116792286 + L1ME1 LINE L1 3738 4490 -1639 2222 196 53 123 chr2 133895724 133896720 -116791134 + L1ME1 LINE L1 5033 5927 -222 1872 148 10 30 chr2 133896720 133897024 -116790830 + AluJo SINE Alu 1 298 -14 2222 196 53 123 chr2 133897024 133897206 -116790648 + L1ME1 LINE L1 5927 6120 -29 21 0 0 0 chr2 133897212 133897233 -116790621 + AT_rich Low_complexity Low_complexity 1 21 0 510 293 20 7 chr2 133897411 133897558 -116790296 - MIR SINE MIR -65 197 49 24 32 0 0 chr2 133897717 133897748 -116790106 + AT_rich Low_complexity Low_complexity 1 31 0 619 131 9 41 chr2 133898164 133898382 -116789472 - Tigger7 DNA MER2_type -1 2486 2211 1322 186 57 0 chr2 133898384 133898631 -116789223 - Tigger7 DNA MER2_type -465 268 8 325 119 34 0 chr2 133898834 133898893 -116788961 + MER68 LTR ERV1 1 61 -501 2362 86 0 0 chr2 133898893 133899194 -116788660 + AluY SINE Alu 1 301 -10 742 136 51 51 chr2 133900304 133900480 -116787374 + L1MA4 LINE L1 5799 5974 -326 818 187 37 0 chr2 133900625 133900812 -116787042 + L1MA4 LINE L1 5963 6156 -144 297 49 0 0 chr2 133900812 133900853 -116787001 - L1MA3 LINE L1 -96 6209 6169 227 200 0 0 chr2 133900916 133900966 -116786888 + A-rich Low_complexity Low_complexity 1 50 0 2582 187 32 12 chr2 133900966 133901473 -116786381 + MER68 LTR ERV1 46 562 0 2153 131 0 3 chr2 133902464 133902769 -116785085 + AluSq SINE Alu 1 304 -9 370 314 162 15 chr2 133903408 133903612 -116784242 - MIR SINE MIR 0 262 29 260 312 11 21 chr2 133903803 133903896 -116783958 + L2 LINE L2 3222 3313 0 24 53 0 0 chr2 133905049 133905087 -116782767 + AT_rich Low_complexity Low_complexity 1 38 0 4056 74 0 4 chr2 133905187 133905715 -116782139 - L1PA7 LINE L1 -11 6143 5618 5383 89 35 2 chr2 133905716 133906544 -116781310 + L1P LINE L1 4480 5334 -812 2322 113 3 0 chr2 133906558 133906868 -116780986 - AluSx SINE Alu -1 311 1 2003 230 154 24 chr2 133907419 133908312 -116779542 + L1ME2 LINE L1 4151 4927 -1237 1970 143 40 3 chr2 133908312 133908613 -116779241 + AluJo SINE Alu 1 312 0 2003 230 154 24 chr2 133908613 133909184 -116778670 + L1ME2 LINE L1 4927 5799 -365 980 237 82 7 chr2 133909196 133909487 -116778367 + L1ME2 LINE L1 5842 6154 -10 391 383 110 28 chr2 133910136 133910528 -116777326 + L2 LINE L2 2805 3228 -44 3298 192 28 98 chr2 133910736 133911017 -116776837 + L1MB8 LINE L1 4915 5214 -964 2225 115 0 0 chr2 133911017 133911312 -116776542 - AluSq SINE Alu -18 295 1 3298 192 28 98 chr2 133911312 133911858 -116775996 + L1MB8 LINE L1 5214 5797 -381 1341 177 59 47 chr2 133911858 133912197 -116775657 - MER2 DNA MER2_type 0 344 2 3298 192 28 98 chr2 133912197 133912278 -116775576 + L1MB8 LINE L1 5797 5882 -296 2264 101 7 0 chr2 133912278 133912574 -116775280 + AluSx SINE Alu 1 298 -14 3298 192 28 98 chr2 133912574 133912834 -116775020 + L1MB8 LINE L1 5882 6163 -15 243 88 0 0 chr2 133912841 133912875 -116774979 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 2044 138 0 3 chr2 133912875 133913158 -116774696 - AluSx SINE Alu -30 282 1 337 300 0 0 chr2 133913577 133913667 -116774187 - L1MC4 LINE L1 -1339 6703 6614 * 339 273 23 0 chr2 133913595 133913683 -116774171 + L1MC4 LINE L1 6614 6703 -1339 1540 29 0 0 chr2 133913688 133913860 -116773994 - AluY SINE Alu -8 303 132 271 276 71 31 chr2 133914855 133914877 -116772977 - MIR SINE MIR -95 167 147 2354 38 45 0 chr2 133914877 133915167 -116772687 - AluY SINE Alu -8 303 1 271 276 71 31 chr2 133915167 133915242 -116772612 - MIR SINE MIR -115 147 66 1387 168 96 39 chr2 133915729 133915846 -116772008 + AluJb SINE Alu 1 110 -202 2194 98 0 14 chr2 133915846 133916142 -116771712 + AluSc SINE Alu 1 292 -17 1387 168 96 39 chr2 133916142 133916304 -116771550 + AluJb SINE Alu 110 296 -16 531 31 0 0 chr2 133916304 133916369 -116771485 + (GGGGA)n Simple_repeat Simple_repeat 1 65 0 319 264 185 43 chr2 133916440 133916694 -116771160 + L1ME LINE L1 4769 5058 -1088 1687 164 67 25 chr2 133916793 133917464 -116770390 + L1MB3 LINE L1 4967 5668 -512 942 120 0 0 chr2 133917480 133917605 -116770249 - FLAM_C SINE Alu -18 125 1 1171 132 47 84 chr2 133917605 133917716 -116770138 + L1MB3 LINE L1 5647 5761 -422 2145 110 0 0 chr2 133917716 133918027 -116769827 - AluSx SINE Alu 0 311 1 1171 132 47 84 chr2 133918027 133918210 -116769644 + L1MB3 LINE L1 5761 5931 -252 768 124 124 0 chr2 133918211 133918364 -116769490 + L1MB3 LINE L1 6009 6180 -3 452 284 86 25 chr2 133918487 133918798 -116769056 + L1ME LINE L1 5314 5647 -474 2127 110 7 3 chr2 133918807 133919108 -116768746 + AluSc SINE Alu 1 302 -7 291 218 56 78 chr2 133919249 133919391 -116768463 + HAL1 LINE L1 808 946 -1561 234 189 95 21 chr2 133919429 133919524 -116768330 + L1ME LINE L1 5724 5825 -337 1621 118 126 79 chr2 133919987 133920343 -116767511 + MER83C LTR ERV1 1 373 0 6363 176 91 13 chr2 133920343 133921707 -116766147 + MER83C-int LTR ERV1 12 1481 -3399 4629 117 7 26 chr2 133921707 133922803 -116765051 + MER83C-int LTR ERV1 3547 4662 -218 1809 153 11 4 chr2 133922803 133923077 -116764777 + AluSx SINE Alu 1 276 -36 225 0 0 0 chr2 133923084 133923109 -116764745 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 4629 117 7 26 chr2 133923109 133923297 -116764557 + MER83C-int LTR ERV1 4668 4880 0 1017 137 119 53 chr2 133923325 133923551 -116764303 + MER83C LTR ERV1 133 373 0 25 0 0 0 chr2 133923654 133923679 -116764175 + AT_rich Low_complexity Low_complexity 1 25 0 22 70 0 0 chr2 133924018 133924061 -116763793 + AT_rich Low_complexity Low_complexity 1 43 0 272 275 0 0 chr2 133924074 133924143 -116763711 - Charlie4 DNA MER1_type -9 1952 1884 1686 108 64 0 chr2 133924222 133924471 -116763383 + AluSg SINE Alu 1 265 -45 27 0 0 0 chr2 133924471 133924498 -116763356 + AT_rich Low_complexity Low_complexity 1 27 0 307 167 0 33 chr2 133924506 133924566 -116763288 + FLAM SINE Alu 68 125 -8 1111 208 87 39 chr2 133924710 133925124 -116762730 - LTR56 LTR ERV1 0 445 12 202 163 163 0 chr2 133925836 133925879 -116761975 - L2 LINE L2 -6 3266 3217 2188 106 0 0 chr2 133926236 133926542 -116761312 - AluSx SINE Alu 0 306 1 22 35 0 0 chr2 133926544 133926573 -116761281 + AT_rich Low_complexity Low_complexity 1 29 0 1672 161 10 47 chr2 133926973 133927271 -116760583 + AluJb SINE Alu 1 287 -25 290 310 0 50 chr2 133927334 133927434 -116760420 - MIR SINE MIR -166 96 2 253 352 130 6 chr2 133928293 133928455 -116759399 - L3b LINE CR1 -2 1581 1400 341 285 83 70 chr2 133928499 133928743 -116759111 + MIR SINE MIR 3 250 -12 319 266 161 0 chr2 133928776 133928919 -116758935 + L1ME2 LINE L1 4 169 -5901 283 118 20 0 chr2 133928963 133929014 -116758840 - Charlie1 DNA MER1_type -1 2760 2709 2381 88 0 13 chr2 133929016 133929321 -116758533 + AluSc SINE Alu 1 301 -8 389 272 10 0 chr2 133929354 133929457 -116758397 + U13 snRNA snRNA 1 104 0 463 183 10 39 chr2 133929577 133929681 -116758173 - Charlie1 DNA MER1_type -317 2444 2344 229 295 0 0 chr2 133929691 133929752 -116758102 - Charlie1 DNA MER1_type -2700 61 1 551 252 27 53 chr2 133929861 133930123 -116757731 + L1ME2 LINE L1 328 582 -5488 636 290 98 34 chr2 133930282 133931109 -116756745 + L1ME2 LINE L1 693 1513 -4567 3255 132 44 15 chr2 133931110 133931701 -116756153 + L1MB3 LINE L1 5574 6181 -2 1999 249 75 37 chr2 133931704 133932571 -116755283 + L1ME2 LINE L1 3778 4681 -1399 1103 188 69 0 chr2 133932571 133932773 -116755081 + MER20 DNA MER1_type 1 216 -3 1999 249 75 37 chr2 133932773 133932799 -116755055 + L1ME2 LINE L1 4681 4705 -1375 769 79 0 0 chr2 133932803 133932904 -116754950 + AluSq/x SINE Alu 4 104 -208 491 104 78 0 chr2 133932908 133932985 -116754869 + AluJ/FRAM SINE Alu 216 298 -14 776 213 73 43 chr2 133932985 133933285 -116754569 + L1ME2 LINE L1 4698 5006 -1074 2039 227 91 53 chr2 133933343 133934010 -116753844 + L1ME2 LINE L1 5206 5846 -252 1600 192 7 0 chr2 133934010 133934322 -116753532 + AluSx SINE Alu 1 314 0 2039 227 91 53 chr2 133934322 133934454 -116753400 + L1ME2 LINE L1 5846 6042 -56 2402 79 0 3 chr2 133934454 133934757 -116753097 + AluY SINE Alu 1 302 -9 2039 227 91 53 chr2 133934757 133934802 -116753052 + L1ME2 LINE L1 6042 6084 -14 438 219 20 40 chr2 133934815 133934966 -116752888 + L1MC5 LINE L1 7770 7917 -44 230 286 233 16 chr2 133934985 133935174 -116752680 - L3b LINE CR1 -252 1331 1102 813 144 122 0 chr2 133935318 133935506 -116752348 + L1MA4 LINE L1 6087 6297 -3 22 0 0 0 chr2 133935506 133935528 -116752326 + AT_rich Low_complexity Low_complexity 1 22 0 282 272 168 8 chr2 133935528 133935653 -116752201 + L2 LINE L2 3169 3313 0 231 139 23 0 chr2 133935947 133935990 -116751864 - Alu SINE Alu -4 171 128 22 56 0 0 chr2 133936088 133936124 -116751730 + AT_rich Low_complexity Low_complexity 1 36 0 201 147 0 0 chr2 133936688 133936722 -116751132 + (TA)n Simple_repeat Simple_repeat 1 34 0 1203 172 160 0 chr2 133937354 133937616 -116750238 + AluSx SINE Alu 1 304 -8 2144 119 3 10 chr2 133938510 133938820 -116749034 + AluSg SINE Alu 1 308 -2 237 225 0 88 chr2 133938861 133938877 -116748977 + L1ME4a LINE L1 5975 5991 -130 2564 46 0 3 chr2 133938877 133939181 -116748673 + AluY SINE Alu 1 303 -8 237 225 0 88 chr2 133939181 133939244 -116748610 + L1ME4a LINE L1 5991 6047 -74 1969 160 0 3 chr2 133939318 133939618 -116748236 - AluJb SINE Alu -13 299 1 325 317 59 40 chr2 133939817 133940019 -116747835 + L2 LINE L2 3108 3313 0 806 176 123 12 chr2 133940708 133940878 -116746976 + MER5A DNA MER1_type 1 189 0 35 0 0 0 chr2 133941167 133941202 -116746652 + AT_rich Low_complexity Low_complexity 1 35 0 1581 136 96 4 chr2 133941756 133942028 -116745826 + AluJo SINE Alu 9 305 -7 2022 152 3 0 chr2 133944523 133944819 -116743035 - AluJo SINE Alu -13 299 3 2287 101 0 3 chr2 133945931 133946227 -116741627 + AluSx SINE Alu 1 295 -17 2125 115 12 135 chr2 133946367 133946597 -116741257 + Tigger2a DNA MER2_type 1 258 -2450 2222 101 7 3 chr2 133946597 133946905 -116740949 - AluSc SINE Alu 0 309 1 2125 115 12 135 chr2 133946905 133947045 -116740809 + Tigger2a DNA MER2_type 258 414 -2294 785 156 8 0 chr2 133947045 133947173 -116740681 + FLAM_C SINE Alu 2 130 -3 2161 47 0 0 chr2 133947180 133947469 -116740385 + AluY SINE Alu 30 318 0 2125 115 12 135 chr2 133947469 133947583 -116740271 + Tigger2a DNA MER2_type 420 434 0 234 246 140 64 chr2 133947931 133948167 -116739687 - LTR40b LTR ERVL -74 388 135 306 260 64 68 chr2 133948617 133948807 -116739047 - MER102b DNA MER1_type -1097 331 141 2193 89 0 36 chr2 133948807 133949110 -116738744 - AluSg SINE Alu -18 292 1 306 260 64 68 chr2 133949110 133949138 -116738716 - MER102b DNA MER1_type -1287 141 114 21 0 0 0 chr2 133949153 133949174 -116738680 + AT_rich Low_complexity Low_complexity 1 21 0 872 158 8 0 chr2 133949174 133949307 -116738547 - AluJo SINE Alu -178 134 1 396 285 7 51 chr2 133949550 133949687 -116738167 - L2 LINE L2 0 3272 3142 296 188 143 54 chr2 133949825 133949937 -116737917 + L1ME LINE L1 5487 5608 -513 1316 175 5 0 chr2 133949940 133950163 -116737691 + AluJo SINE Alu 81 304 -8 578 291 110 52 chr2 133950171 133950707 -116737147 + HAL1 LINE L1 1 567 -1940 339 261 74 94 chr2 133950714 133951066 -116736788 + HAL1 LINE L1 593 937 -1570 1308 245 81 49 chr2 133951092 133951161 -116736693 + HAL1 LINE L1 1672 1737 -770 1722 158 10 26 chr2 133951161 133951465 -116736389 + AluJo SINE Alu 1 299 -13 1308 245 81 49 chr2 133951465 133952065 -116735789 + HAL1 LINE L1 1737 2362 -145 1471 167 14 65 chr2 133952083 133952377 -116735477 - AluJo SINE Alu -20 292 14 204 40 0 0 chr2 133952399 133952424 -116735430 + (T)n Simple_repeat Simple_repeat 1 25 0 291 122 0 0 chr2 133952426 133952467 -116735387 - AluS SINE Alu -231 72 32 348 307 213 75 chr2 133952515 133952877 -116734977 - L2 LINE L2 -34 3238 2827 1723 154 29 0 chr2 133952884 133953007 -116734847 + AluJb SINE Alu 1 119 -206 207 0 0 0 chr2 133953007 133953030 -116734824 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1723 154 29 0 chr2 133953030 133953223 -116734631 + AluJb SINE Alu 119 325 0 953 236 32 45 chr2 133953242 133953340 -116734514 + LTR65 LTR ERV1 361 459 -210 1757 153 9 12 chr2 133953340 133953660 -116734194 + L1MB3 LINE L1 5865 6183 0 2337 86 0 0 chr2 133953670 133953962 -116733892 + AluSc SINE Alu 1 292 -17 953 236 32 45 chr2 133953962 133954165 -116733689 + LTR65 LTR ERV1 468 669 0 553 239 181 4 chr2 133954310 133954570 -116733284 + L1MEd LINE L1 561 866 -5253 515 178 59 105 chr2 133954679 133954831 -116733023 + L2 LINE L2 3159 3303 -10 839 235 170 0 chr2 133955456 133955733 -116732121 - MER5C DNA MER1_type 0 324 1 893 203 37 5 chr2 133955743 133955930 -116731924 + MER58A DNA MER1_type 4 196 -28 237 269 104 0 chr2 133956435 133956502 -116731352 + MIR SINE MIR 132 205 -57 189 307 129 20 chr2 133956714 133956815 -116731039 - L2 LINE L2 -5 3308 3197 226 152 87 0 chr2 133957062 133957108 -116730746 + MIR SINE MIR 58 107 -155 397 232 32 11 chr2 133957560 133957655 -116730199 - MIR3 SINE MIR -24 184 88 279 0 0 0 chr2 133958545 133958576 -116729278 + (TTTTA)n Simple_repeat Simple_repeat 3 33 0 1205 184 24 68 chr2 133959034 133959414 -116728440 + MLT1A2 LTR MaLR 10 372 -2 274 239 23 23 chr2 133959444 133959532 -116728322 + LTR67 LTR ERVL 462 549 -8 2324 75 3 0 chr2 133959672 133959983 -116727871 - AluSx SINE Alu 0 312 1 1337 70 5 40 chr2 133961274 133961474 -116726380 - L1PA13 LINE L1 -4 6159 5967 2076 142 7 0 chr2 133962657 133962967 -116724887 + AluJb SINE Alu 1 312 0 184 73 0 49 chr2 133962980 133963021 -116724833 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 1898 136 50 4 chr2 133963025 133963304 -116724550 + AluJb SINE Alu 1 292 -20 1471 81 35 147 chr2 133963417 133963763 -116724091 - L1MA2 LINE L1 0 6304 5998 323 236 25 96 chr2 133963974 133964131 -116723723 - L1ME4a LINE L1 -46 6075 5930 2339 92 0 0 chr2 133964253 133964548 -116723306 - AluSg SINE Alu -15 295 1 354 247 68 20 chr2 133964668 133964814 -116723040 - L1ME4a LINE L1 -450 5671 5519 26 0 0 0 chr2 133964850 133964876 -116722978 + AT_rich Low_complexity Low_complexity 1 26 0 974 173 0 0 chr2 133964920 133965070 -116722784 - AluJo/FRAM SINE Alu -26 286 137 1964 138 0 41 chr2 133965073 133965392 -116722462 - AluSx SINE Alu -6 306 1 838 177 134 56 chr2 133965821 133965884 -116721970 - MIR SINE MIR 0 262 205 844 93 78 0 chr2 133965884 133966013 -116721841 + MER85 DNA T2_type 1 139 0 838 177 134 56 chr2 133966013 133966181 -116721673 - MIR SINE MIR -57 205 13 1608 201 3 19 chr2 133966750 133967058 -116720796 - AluJo SINE Alu -9 303 1 2559 44 0 0 chr2 133967384 133967682 -116720172 + AluY SINE Alu 2 299 -12 481 203 0 0 chr2 133967713 133967792 -116720062 + AluJ/FLAM SINE Alu 4 82 -230 928 192 0 0 chr2 133967794 133967975 -116719879 - AluJo/FRAM SINE Alu 0 316 136 461 69 0 0 chr2 133967975 133968033 -116719821 + FLAM SINE Alu 67 124 -19 844 189 28 6 chr2 133968264 133968444 -116719410 - MER20 DNA MER1_type -5 214 31 860 218 186 23 chr2 133968667 133969053 -116718801 - HAL1 LINE L1 -4 2503 2055 282 29 0 0 chr2 133969072 133969107 -116718747 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 1710 120 113 40 chr2 133969107 133969165 -116718689 - L1MC1 LINE L1 -6 6327 6275 2136 135 26 0 chr2 133969165 133969468 -116718386 + AluSx SINE Alu 1 311 -1 1710 120 113 40 chr2 133969468 133969735 -116718119 - L1MC1 LINE L1 -58 6275 5978 842 278 58 3 chr2 133969908 133970199 -116717655 - HAL1 LINE L1 -636 1871 1565 1864 151 3 26 chr2 133970202 133970514 -116717340 + AluJb SINE Alu 4 308 -4 567 143 0 57 chr2 133970517 133970622 -116717232 - FLAM_A SINE Alu -43 99 1 2752 239 52 28 chr2 133970691 133971740 -116716114 - L1ME3A LINE L1 -6 6164 5086 2250 106 0 0 chr2 133971740 133972033 -116715821 + AluSc SINE Alu 1 293 -16 2752 239 52 28 chr2 133972033 133972087 -116715767 - L1ME3A LINE L1 -1084 5086 5035 1242 203 0 25 chr2 133972096 133972333 -116715521 + AluJo SINE Alu 1 231 -81 421 197 61 41 chr2 133972338 133972485 -116715369 - L1ME3A LINE L1 -1145 5001 4852 1149 236 23 11 chr2 133972495 133972847 -116715007 - L1ME3A LINE L1 -1353 4793 4438 369 302 31 27 chr2 133972864 133973122 -116714732 - HAL1 LINE L1 -964 1543 1285 1234 302 43 43 chr2 133973191 133973930 -116713924 - HAL1 LINE L1 -1607 900 162 571 229 89 0 chr2 133973971 133974128 -116713726 - MER104 DNA Tc2 0 180 10 2084 97 34 10 chr2 133974137 133974435 -116713419 + AluSp SINE Alu 1 305 -8 1441 208 14 21 chr2 133974476 133974765 -116713089 - AluJo SINE Alu -23 289 3 876 238 108 52 chr2 133974801 133974931 -116712923 + L1M4 LINE L1 4856 4977 -1169 2091 122 20 3 chr2 133974931 133975227 -116712627 + AluSx SINE Alu 2 302 -10 876 238 108 52 chr2 133975227 133975541 -116712313 + L1M4 LINE L1 4977 5325 -821 1037 170 0 2 chr2 133975545 133975794 -116712060 + AluJb SINE Alu 11 297 -15 2306 99 0 3 chr2 133976140 133976442 -116711412 - AluSq SINE Alu -9 304 4 1536 169 25 25 chr2 133976446 133976724 -116711130 - AluJo SINE Alu -18 294 17 1892 127 63 36 chr2 133976724 133977086 -116710768 + THE1C LTR MaLR 4 375 0 1519 169 62 18 chr2 133977250 133977588 -116710266 + MLT1A1 LTR MaLR 10 362 -3 336 102 0 0 chr2 133977588 133977637 -116710217 + (CA)n Simple_repeat Simple_repeat 2 50 0 260 322 88 83 chr2 133979651 133980265 -116707589 + L2 LINE L2 2400 3048 -224 27 0 0 0 chr2 133981193 133981220 -116706634 + AT_rich Low_complexity Low_complexity 1 27 0 2691 39 0 3 chr2 133981500 133981812 -116706042 - AluY SINE Alu 0 311 1 189 263 0 0 chr2 133982244 133982282 -116705572 + MIR SINE MIR 69 106 -102 22 0 0 0 chr2 133982314 133982336 -116705518 + AT_rich Low_complexity Low_complexity 1 22 0 242 192 82 27 chr2 133982426 133982499 -116705355 + MER5A DNA MER1_type 68 144 -45 1630 193 3 0 chr2 133983110 133983539 -116704315 + AluJo SINE Alu 21 450 0 689 93 10 0 chr2 133984125 133984222 -116703632 - MER53 DNA DNA -91 98 1 366 328 55 0 chr2 133984233 133984361 -116703493 + MIR SINE MIR 118 252 -10 21 0 0 0 chr2 133984370 133984391 -116703463 + AT_rich Low_complexity Low_complexity 1 21 0 2140 125 0 16 chr2 133984400 133984712 -116703142 + AluJb SINE Alu 1 307 -5 223 309 72 10 chr2 133984904 133985001 -116702853 + MIR SINE MIR 95 197 -65 2250 54 0 14 chr2 133985217 133985495 -116702359 + AluY SINE Alu 1 274 -37 219 88 0 0 chr2 133985497 133985531 -116702323 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 1080 175 12 0 chr2 133986905 133987076 -116700778 + FAM SINE Alu 3 175 0 760 345 39 61 chr2 133987177 133987987 -116699867 - L2 LINE L2 -31 3241 2449 193 302 48 0 chr2 133988016 133988079 -116699775 + L2 LINE L2 2564 2629 -685 1403 165 58 61 chr2 133988105 133988240 -116699614 + L1MB8 LINE L1 5454 5588 -590 2024 117 0 0 chr2 133988240 133988513 -116699341 + AluSg SINE Alu 38 310 0 1403 165 58 61 chr2 133988513 133988704 -116699150 + L1MB8 LINE L1 5588 5779 -399 195 69 0 0 chr2 133988717 133988746 -116699108 + (TTTAA)n Simple_repeat Simple_repeat 2 30 0 9217 28 8 228 chr2 133988746 133990510 -116697344 - SVA Other Other -7 1379 4 1572 162 20 121 chr2 133990602 133990779 -116697075 + L1MB8 LINE L1 5773 5966 -212 2157 113 0 7 chr2 133990779 133991098 -116696756 + AluJb SINE Alu 1 312 0 1572 162 20 121 chr2 133991098 133991365 -116696489 + L1MB8 LINE L1 5966 6172 -6 279 315 66 66 chr2 133991384 133991500 -116696354 + L2 LINE L2 2793 2911 -403 2301 80 3 7 chr2 133991500 133991800 -116696054 - AluSp SINE Alu -14 299 1 279 315 66 66 chr2 133991800 133991864 -116695990 + L2 LINE L2 2910 2973 -341 212 288 16 72 chr2 133991931 133992056 -116695798 + L2 LINE L2 3109 3226 -87 301 287 23 39 chr2 133992196 133992302 -116695552 - L2 LINE L2 -925 2389 2284 396 0 0 0 chr2 133992302 133992346 -116695508 + (TG)n Simple_repeat Simple_repeat 1 44 0 301 287 23 39 chr2 133992346 133992368 -116695486 - L2 LINE L2 -1030 2284 2263 349 272 231 17 chr2 133992383 133992661 -116695193 - L2 LINE L2 -1183 2131 1787 2165 113 0 3 chr2 133992661 133992954 -116694900 - AluSx SINE Alu -12 300 9 349 272 231 17 chr2 133992954 133992965 -116694889 - L2 LINE L2 -1527 1787 1780 1347 206 8 0 chr2 133992980 133993232 -116694622 + HERVL40 LTR ERVL 5277 5530 0 1922 228 24 24 chr2 133993232 133993692 -116694162 + LTR40b LTR ERVL 1 460 -2 182 219 34 101 chr2 133993708 133993827 -116694027 - L2 LINE L2 -1548 1766 1656 330 266 13 0 chr2 133993829 133993908 -116693946 + L1ME3A LINE L1 5703 5782 -388 306 289 0 21 chr2 133993926 133994023 -116693831 + L1MC4 LINE L1 6620 6714 -1328 491 147 0 0 chr2 133994026 133994101 -116693753 - AluJ/FLAM SINE Alu -236 76 2 346 236 8 73 chr2 133994116 133994239 -116693615 - L1ME3A LINE L1 -281 5889 5775 2010 132 0 14 chr2 133994240 133994535 -116693319 + AluSx SINE Alu 4 294 -18 294 294 16 40 chr2 133994647 133994773 -116693081 + L1ME3A LINE L1 5963 6085 -85 210 71 0 0 chr2 133994780 133994808 -116693046 + (T)n Simple_repeat Simple_repeat 1 28 0 1656 173 13 7 chr2 133994966 133995273 -116692581 + AluJb SINE Alu 1 309 -3 379 272 26 18 chr2 133995520 133995634 -116692220 - L2 LINE L2 -5 3308 3194 216 319 124 26 chr2 133995736 133995849 -116692005 + L2 LINE L2 3147 3270 -2 444 276 77 24 chr2 133996489 133996659 -116691195 + MIR SINE MIR 6 184 -78 222 340 19 28 chr2 133996752 133996858 -116690996 + L2 LINE L2 3121 3225 -47 2043 97 45 10 chr2 133997004 133997294 -116690560 - AluSx SINE Alu -12 300 1 2601 47 0 0 chr2 133997897 133998197 -116689657 + AluY SINE Alu 12 311 0 2044 115 10 7 chr2 133998465 133998769 -116689085 + AluSx SINE Alu 1 305 -7 1948 156 56 11 chr2 133999113 133999473 -116688381 - L1MC1 LINE L1 -5 6328 5953 599 243 9 17 chr2 133999758 133999921 -116687933 - MIR SINE MIR 0 262 102 2183 125 3 0 chr2 133999972 134000277 -116687577 + AluSq SINE Alu 1 306 -7 479 280 147 6 chr2 134000650 134000877 -116686977 - L1MC1 LINE L1 -720 5583 5517 1186 184 0 36 chr2 134001597 134001820 -116686034 - AluJo SINE Alu -21 291 77 267 31 0 0 chr2 134001930 134001962 -116685892 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2039 108 7 0 chr2 134001962 134002239 -116685615 - AluSx SINE Alu -33 279 1 429 263 177 40 chr2 134003776 134003974 -116683880 - MIR SINE MIR 0 262 38 219 69 0 0 chr2 134004009 134004038 -116683816 + (CA)n Simple_repeat Simple_repeat 1 29 0 * 261 0 0 0 chr2 134004037 134004066 -116683788 + (TC)n Simple_repeat Simple_repeat 1 29 0 1964 102 11 32 chr2 134004373 134004509 -116683345 + AluSx SINE Alu 1 138 -174 2399 68 0 3 chr2 134004509 134004802 -116683052 + AluY SINE Alu 1 292 -19 1964 102 11 32 chr2 134004802 134004950 -116682904 + AluSx SINE Alu 138 279 -33 1857 169 3 0 chr2 134004980 134005276 -116682578 + AluJo SINE Alu 1 297 -15 2117 135 13 77 chr2 134005467 134005545 -116682309 - MLT1B LTR MaLR 0 390 309 2097 135 0 0 chr2 134005545 134005834 -116682020 + AluSx SINE Alu 1 289 -23 2117 135 13 77 chr2 134005834 134006147 -116681707 - MLT1B LTR MaLR -81 309 24 193 313 117 31 chr2 134006208 134006336 -116681518 - L2 LINE L2 -220 3052 2914 277 186 32 105 chr2 134006724 134006848 -116681006 + L1M4 LINE L1 5165 5279 -867 2144 87 0 0 chr2 134006871 134007137 -116680717 + AluSc SINE Alu 1 266 -43 2272 45 4 0 chr2 134007137 134007400 -116680454 + AluY SINE Alu 47 311 0 1173 85 0 0 chr2 134007503 134007765 -116680089 + (TTC)n Simple_repeat Simple_repeat 1 262 0 1549 177 35 3 chr2 134007767 134008232 -116679622 - AluJb SINE Alu 0 474 1 247 299 103 0 chr2 134008489 134008606 -116679248 - L3 LINE CR1 -282 1295 1167 369 131 0 0 chr2 134009144 134009205 -116678649 + (TTCC)n Simple_repeat Simple_repeat 3 63 0 2286 97 0 3 chr2 134009206 134009496 -116678358 - AluSx SINE Alu -23 289 1 301 244 43 43 chr2 134009693 134009808 -116678046 - L3 LINE CR1 -587 990 876 292 199 94 4 chr2 134009828 134009944 -116677910 + MER5A DNA MER1_type 4 176 -13 2273 113 0 0 chr2 134011897 134012198 -116675656 + AluSx SINE Alu 1 301 -11 2093 107 0 24 chr2 134012800 134013115 -116674739 - AluSx SINE Alu 0 308 1 232 313 48 36 chr2 134013161 134013244 -116674610 - MIR SINE MIR -159 103 20 28 48 0 0 chr2 134013295 134013337 -116674517 + AT_rich Low_complexity Low_complexity 1 42 0 1901 150 14 3 chr2 134014473 134014767 -116673087 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr2 134014780 134014801 -116673053 + AT_rich Low_complexity Low_complexity 1 21 0 853 210 124 0 chr2 134014838 134015024 -116672830 + MER58C DNA MER1_type 7 215 0 2419 157 36 21 chr2 134015044 134015383 -116672471 - L1MB7 LINE L1 -20 6164 5815 1855 197 60 112 chr2 134015383 134015963 -116671891 - MER44D DNA MER2_type 0 605 1 2419 157 36 21 chr2 134015963 134016089 -116671765 - L1MB7 LINE L1 -369 5815 5692 2235 71 34 3 chr2 134016964 134017260 -116670594 - AluSc SINE Alu -4 305 1 2320 57 4 0 chr2 134017417 134017729 -116670125 - AluY SINE Alu 0 313 1 183 247 49 25 chr2 134017816 134017897 -116669957 + MIR SINE MIR 138 220 -42 581 238 90 66 chr2 134018321 134018565 -116669289 + MIR SINE MIR 1 250 -12 2024 142 0 3 chr2 134018956 134019244 -116668610 + AluJb SINE Alu 1 287 -25 2622 61 0 0 chr2 134019258 134019568 -116668286 + AluY SINE Alu 1 310 -1 318 217 43 61 chr2 134021008 134021123 -116666731 - L2 LINE L2 -164 3108 2996 2309 83 3 16 chr2 134021304 134021617 -116666237 - AluY SINE Alu -2 309 1 370 288 226 5 chr2 134021716 134021928 -116665926 + MIR SINE MIR 4 262 0 595 234 26 36 chr2 134024179 134024371 -116663483 + L1ME LINE L1 5615 5804 -317 2220 114 0 3 chr2 134026131 134026428 -116661426 + AluSx SINE Alu 1 296 -16 1183 202 54 36 chr2 134026900 134027177 -116660677 + AluJo SINE Alu 1 282 -30 1817 189 0 3 chr2 134027902 134028214 -116659640 - AluJo SINE Alu -1 311 1 1877 128 3 31 chr2 134028260 134028550 -116659304 + AluJb SINE Alu 14 295 -17 1815 171 3 26 chr2 134028698 134029003 -116658851 - AluJo SINE Alu -14 298 1 303 303 128 14 chr2 134029016 134029227 -116658627 - L1MB7 LINE L1 -2311 5497 5263 570 168 7 98 chr2 134029307 134029346 -116658508 - L1ME3 LINE L1 -7 6155 6114 2036 155 0 7 chr2 134029346 134029655 -116658199 + AluJb SINE Alu 1 307 -5 570 168 7 98 chr2 134029655 134029758 -116658096 - L1ME3 LINE L1 -48 6114 6026 735 194 59 54 chr2 134029758 134029944 -116657910 + MER3 DNA MER1_type 1 187 -22 1366 218 56 69 chr2 134029956 134030496 -116657358 - L1ME3 LINE L1 -170 5994 5489 2922 195 31 24 chr2 134030496 134031044 -116656810 - MER68 LTR ERV1 -10 552 1 5355 239 103 33 chr2 134031044 134031313 -116656541 - L1ME3 LINE L1 -674 5496 5247 2260 94 7 3 chr2 134031313 134031611 -116656243 - AluSg SINE Alu -11 299 1 5355 239 103 33 chr2 134031611 134033630 -116654224 - L1ME3 LINE L1 -923 5247 3035 2462 51 27 0 chr2 134033644 134033936 -116653918 - AluY SINE Alu -11 300 1 233 162 67 114 chr2 134034062 134034167 -116653687 - LTR27 LTR ERV1 -2 634 535 2508 190 125 11 chr2 134034222 134034773 -116653081 - LTR28 LTR ERV1 -425 595 1 1688 132 53 70 chr2 134035158 134035473 -116652381 - L1MA4A LINE L1 -4 6299 5989 321 26 0 0 chr2 134035473 134035511 -116652343 + (CA)n Simple_repeat Simple_repeat 2 39 0 1688 132 53 70 chr2 134035511 134035536 -116652318 - L1MA4A LINE L1 -314 5989 5965 544 319 112 4 chr2 134035591 134035823 -116652031 + MIR SINE MIR 6 262 0 2106 128 0 22 chr2 134036280 134036599 -116651255 - AluSx SINE Alu 0 312 1 191 337 69 0 chr2 134036687 134036788 -116651066 + MIR SINE MIR 48 155 -107 643 165 132 16 chr2 134036793 134036975 -116650879 - L1ME1 LINE L1 -223 5943 5741 275 234 80 14 chr2 134036976 134037059 -116650795 + L1MA10 LINE L1 6011 6087 -161 252 0 0 0 chr2 134037059 134037087 -116650767 + (CA)n Simple_repeat Simple_repeat 2 29 0 275 234 80 14 chr2 134037087 134037142 -116650712 + L1MA10 LINE L1 6087 6245 -3 2108 138 0 0 chr2 134037151 134037449 -116650405 + AluSx SINE Alu 1 298 -14 1146 172 20 0 chr2 134037712 134037910 -116649944 - AluJo SINE Alu -20 292 91 1775 124 19 68 chr2 134038576 134038899 -116648955 - AluSx SINE Alu -5 307 1 254 207 52 0 chr2 134038979 134039037 -116648817 + MIR SINE MIR 82 142 -66 300 122 0 0 chr2 134039317 134039366 -116648488 - Alu SINE Alu -252 49 1 340 209 171 29 chr2 134039968 134040073 -116647781 - MIR SINE MIR -140 122 3 2331 81 0 14 chr2 134040219 134040514 -116647340 - AluY SINE Alu -20 291 1 229 316 197 32 chr2 134041393 134041611 -116646243 - L2 LINE L2 -5 3267 3014 733 237 43 39 chr2 134044666 134044923 -116642931 + L1ME4a LINE L1 5581 5838 -283 672 191 35 0 chr2 134046031 134046146 -116641708 - Tigger3(Golem) DNA MER2_type -13 3016 2898 391 283 106 57 chr2 134046174 134046988 -116640866 + L1 LINE L1 2879 3732 -2414 724 281 105 18 chr2 134047056 134047524 -116640330 + L1 LINE L1 3835 4347 -1799 1169 202 0 23 chr2 134047652 134047870 -116639984 - AluJo SINE Alu -93 219 7 2819 260 91 30 chr2 134047876 134048109 -116639745 + L1MC4 LINE L1 6146 6363 -1525 2343 99 10 3 chr2 134048109 134048413 -116639441 + AluSx SINE Alu 1 306 -6 2819 260 91 30 chr2 134048413 134049498 -116638356 + L1MC4 LINE L1 6363 7535 -353 2799 147 128 94 chr2 134049538 134049752 -116638102 + L1MC3 LINE L1 6873 7078 -707 252 222 32 0 chr2 134049752 134049815 -116638039 + MLT1F1 LTR MaLR 35 99 -468 2799 147 128 94 chr2 134049815 134050232 -116637622 + L1MC3 LINE L1 7078 7590 -195 2600 158 12 29 chr2 134050239 134050725 -116637129 + L1MB7 LINE L1 5688 6165 -19 268 71 0 24 chr2 134050728 134050770 -116637084 + L1MC3 LINE L1 7574 7614 -171 592 228 73 87 chr2 134050796 134050947 -116636907 + L1MC4 LINE L1 7549 7701 -341 2259 113 0 10 chr2 134050947 134051258 -116636596 + AluSx SINE Alu 1 308 -4 592 228 73 87 chr2 134051258 134051474 -116636380 + L1MC4 LINE L1 7701 7911 -131 357 271 172 50 chr2 134051636 134051857 -116635997 + L1ME LINE L1 5496 5743 -427 22 35 0 0 chr2 134052903 134052932 -116634922 + AT_rich Low_complexity Low_complexity 1 29 0 2156 99 46 0 chr2 134056454 134056737 -116631117 + AluSx SINE Alu 1 296 -16 1824 186 0 13 chr2 134056896 134057208 -116630646 - AluJo SINE Alu -4 308 1 21 57 0 0 chr2 134057744 134057779 -116630075 + AT_rich Low_complexity Low_complexity 1 35 0 24 67 0 0 chr2 134060519 134060564 -116627290 + AT_rich Low_complexity Low_complexity 1 45 0 204 375 23 0 chr2 134061012 134061100 -116626754 - L2 LINE L2 0 3272 3183 264 154 31 62 chr2 134061450 134061515 -116626339 + MLT1H LTR MaLR 96 158 -391 383 336 63 24 chr2 134061584 134061922 -116625932 - L2 LINE L2 -234 3038 2685 1317 263 165 19 chr2 134062189 134062701 -116625153 - L2 LINE L2 0 3313 2877 2286 90 3 17 chr2 134062701 134063002 -116624852 + AluSx SINE Alu 1 297 -15 1317 263 165 19 chr2 134063002 134063338 -116624516 - L2 LINE L2 -436 2877 2319 1038 188 339 23 chr2 134063357 134063741 -116624113 + MLT1F LTR MaLR 37 541 -1 849 251 186 16 chr2 134063743 134064054 -116623800 - L2 LINE L2 -1018 2296 1933 7037 214 122 8 chr2 134065812 134067483 -116620371 - L1M2b LINE L1 -5348 1861 1 2092 124 3 7 chr2 134067646 134067944 -116619910 + AluSg SINE Alu 6 302 -8 1118 189 0 66 chr2 134068062 134068289 -116619565 - AluJb SINE Alu -16 296 85 565 89 13 13 chr2 134068289 134068368 -116619486 - AluY SINE Alu -62 249 171 886 154 0 7 chr2 134068468 134068611 -116619243 + L1MA1 LINE L1 1505 1646 -5203 12718 186 39 100 chr2 134068612 134069110 -116618744 + L1MA1 LINE L1 1971 2498 -4504 2172 136 3 0 chr2 134069110 134069418 -116618436 + AluSp SINE Alu 1 309 -4 12718 186 39 100 chr2 134069418 134070674 -116617180 + L1MA1 LINE L1 2498 3829 -3173 1173 198 95 4 chr2 134070674 134070916 -116616938 + AluJo SINE Alu 1 264 -48 12718 186 39 100 chr2 134070916 134071004 -116616850 + L1MA1 LINE L1 3829 3921 -3081 3092 95 11 16 chr2 134071004 134071455 -116616399 + L1MA1 LINE L1 6556 7004 0 12718 186 39 100 chr2 134071455 134072514 -116615340 + L1MA1 LINE L1 3921 5043 -1959 2445 83 0 3 chr2 134072514 134072816 -116615038 + AluY SINE Alu 1 301 -10 12718 186 39 100 chr2 134072816 134074002 -116613852 + L1MA1 LINE L1 5043 6191 -811 6965 56 8 13 chr2 134074003 134075509 -116612345 + SVA Other Other 1 1343 -43 3115 20 3 0 chr2 134075610 134075964 -116611890 - L1PA3 LINE L1 -124 6031 5677 * 3989 34 10 2 chr2 134075955 134076462 -116611392 + L1P LINE L1 2923 3433 -2713 241 280 180 0 chr2 134076514 134076614 -116611240 - L1ME4a LINE L1 -30 6091 5974 554 263 181 11 chr2 134077343 134077579 -116610275 - MIR SINE MIR 0 262 3 2157 102 7 0 chr2 134078129 134078412 -116609442 - AluSx SINE Alu -23 289 5 323 204 118 21 chr2 134078699 134078737 -116609117 - MLT2B1 LTR ERVL 0 520 487 441 0 0 0 chr2 134078737 134078786 -116609068 + (TG)n Simple_repeat Simple_repeat 2 50 0 323 204 118 21 chr2 134078786 134078801 -116609053 - MLT2B1 LTR ERVL -33 487 475 201 39 0 0 chr2 134078801 134078827 -116609027 + (GA)n Simple_repeat Simple_repeat 1 26 0 323 204 118 21 chr2 134078827 134078865 -116608989 - MLT2B1 LTR ERVL -45 475 419 * 1046 157 22 11 chr2 134078860 134079045 -116608809 - MLT2D LTR ERVL -227 187 1 241 307 115 64 chr2 134079408 134080067 -116607787 - L2 LINE L2 -217 3055 2346 2154 113 0 14 chr2 134080313 134080606 -116607248 + AluSx SINE Alu 1 289 -23 487 274 138 36 chr2 134080621 134080809 -116607045 - MIR SINE MIR -30 232 31 38236 32 30 2 chr2 134080911 134086916 -116600938 + L1PA2 LINE L1 7 6155 0 710 116 18 9 chr2 134087295 134087407 -116600447 - L1PA10 LINE L1 -1 6167 6055 1635 135 36 87 chr2 134087884 134088240 -116599614 + MER7A DNA MER2_type 1 336 -10 270 95 0 0 chr2 134088240 134088282 -116599572 + (TG)n Simple_repeat Simple_repeat 1 42 0 2215 117 0 19 chr2 134088546 134088862 -116598992 + AluSx SINE Alu 3 312 0 253 273 52 17 chr2 134088983 134089155 -116598699 - L1MEc LINE L1 -4170 2226 2049 1664 216 115 7 chr2 134089194 134089629 -116598225 + MLT1D LTR MaLR 24 505 0 1034 194 75 19 chr2 134089629 134089897 -116597957 + MLT1D-int LTR MaLR 1 283 -1088 2213 120 0 0 chr2 134089904 134090203 -116597651 + AluSp SINE Alu 1 299 -14 22 35 0 0 chr2 134094015 134094044 -116593810 + AT_rich Low_complexity Low_complexity 1 29 0 2161 93 3 3 chr2 134096056 134096345 -116591509 + AluSx SINE Alu 5 293 -19 465 319 71 12 chr2 134096424 134096593 -116591261 + MIR SINE MIR 18 196 -66 1508 163 6 82 chr2 134096829 134097019 -116590835 - AluJb SINE Alu -17 295 137 244 0 27 27 chr2 134097019 134097056 -116590798 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 1508 163 6 82 chr2 134097056 134097184 -116590670 - AluJb SINE Alu -175 137 1 2207 78 0 36 chr2 134097360 134097666 -116590188 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr2 134097666 134097689 -116590165 + AT_rich Low_complexity Low_complexity 1 23 0 203 231 0 0 chr2 134098277 134098316 -116589538 - MER5A DNA MER1_type -27 162 124 2386 85 0 7 chr2 134098992 134099298 -116588556 - AluSq SINE Alu -9 304 1 2076 135 3 0 chr2 134099905 134100209 -116587645 + AluSg SINE Alu 1 305 -5 1862 111 3 89 chr2 134100280 134100596 -116587258 + AluSx SINE Alu 1 289 -23 470 211 167 26 chr2 134101665 134101821 -116586033 + MIR SINE MIR 23 200 -62 4061 112 21 35 chr2 134102364 134103089 -116584765 - L1MA4A LINE L1 -117 6186 5472 2292 206 19 59 chr2 134103551 134104200 -116583654 + LTR5 LTR ERVK 1 623 -346 280 143 0 0 chr2 134104473 134104522 -116583332 - AluY SINE Alu -169 132 84 1210 181 19 0 chr2 134104522 134104738 -116583116 - AluJo SINE Alu -92 220 1 1918 119 3 48 chr2 134105131 134105442 -116582412 - AluJb SINE Alu -15 297 1 255 278 0 0 chr2 134106208 134106280 -116581574 - MIR SINE MIR -25 237 166 306 0 0 0 chr2 134106385 134106419 -116581435 + (TG)n Simple_repeat Simple_repeat 2 35 0 180 0 0 0 chr2 134106583 134106603 -116581251 + (T)n Simple_repeat Simple_repeat 1 20 0 352 331 42 35 chr2 134108677 134108819 -116579035 + MIR SINE MIR 34 176 -86 1273 129 0 57 chr2 134108822 134109032 -116578822 - AluJb SINE Alu -1 311 114 1598 100 4 17 chr2 134109047 134109277 -116578577 - AluJo SINE Alu 0 312 86 2289 102 7 0 chr2 134109286 134109591 -116578263 - AluSx SINE Alu -5 307 1 1598 116 51 11 chr2 134109869 134110144 -116577710 - L1MA4A LINE L1 -14 6289 6004 469 276 169 15 chr2 134110245 134110506 -116577348 + MLT1K LTR MaLR 284 584 -4 204 274 0 0 chr2 134110522 134110584 -116577270 + GA-rich Low_complexity Low_complexity 2 63 0 222 213 32 11 chr2 134111260 134111354 -116576500 + (CATATA)n Simple_repeat Simple_repeat 6 101 0 835 161 31 36 chr2 134111358 134111551 -116576303 + MER89 LTR ERV1 1 192 -367 23 0 0 0 chr2 134111586 134111609 -116576245 + AT_rich Low_complexity Low_complexity 1 23 0 2207 97 0 3 chr2 134111612 134111902 -116575952 + AluSg SINE Alu 1 289 -21 250 306 56 37 chr2 134112146 134112254 -116575600 + L2 LINE L2 3163 3272 0 383 352 70 0 chr2 134112570 134112712 -116575142 + MIR3 SINE MIR 33 184 -24 23 54 0 0 chr2 134113657 134113694 -116574160 + AT_rich Low_complexity Low_complexity 1 37 0 313 237 0 0 chr2 134113828 134113887 -116573967 + MIR SINE MIR 91 149 -59 2200 215 75 20 chr2 134114457 134115121 -116572733 + L1MC4a LINE L1 7079 7779 -29 880 117 0 51 chr2 134115123 134115260 -116572594 - FLAM_C SINE Alu -1 132 3 22 0 0 0 chr2 134115482 134115504 -116572350 + AT_rich Low_complexity Low_complexity 1 22 0 1243 196 13 0 chr2 134116171 134116401 -116571453 - AluJb SINE Alu -16 296 64 1940 101 25 11 chr2 134116729 134117005 -116570849 + AluSg SINE Alu 1 280 -30 822 229 0 6 chr2 134117325 134117500 -116570354 + MER58A DNA MER1_type 9 182 -42 1431 150 142 0 chr2 134117543 134117803 -116570051 + AluSg SINE Alu 5 301 -9 2169 112 7 0 chr2 134117806 134118100 -116569754 + AluSx SINE Alu 1 296 -16 1520 155 16 12 chr2 134118524 134118769 -116569085 - AluJb SINE Alu -52 260 15 25 31 0 0 chr2 134119298 134119330 -116568524 + AT_rich Low_complexity Low_complexity 1 32 0 28 48 0 0 chr2 134120216 134120258 -116567596 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 134121922 134121943 -116565911 + AT_rich Low_complexity Low_complexity 1 21 0 1847 158 0 3 chr2 134123409 134123693 -116564161 - AluJb SINE Alu -20 292 10 28 95 0 0 chr2 134125079 134125163 -116562691 + AT_rich Low_complexity Low_complexity 1 84 0 1859 125 182 22 chr2 134125263 134125664 -116562190 - Tigger2 DNA MER2_type 0 2718 2254 * 4981 140 102 6 chr2 134125661 134126599 -116561255 - Tigger2 DNA MER2_type -1690 1028 1 249 245 168 35 chr2 134126730 134126873 -116560981 - MIR SINE MIR -94 168 7 227 313 125 0 chr2 134126877 134126957 -116560897 + MIR3 SINE MIR 65 154 -54 2006 123 3 3 chr2 134127055 134127374 -116560480 + AluSx SINE Alu 1 312 0 22 56 0 0 chr2 134127826 134127862 -116559992 + AT_rich Low_complexity Low_complexity 1 36 0 2349 82 7 0 chr2 134128896 134129187 -116558667 - AluSp SINE Alu -20 293 1 2247 113 3 3 chr2 134130039 134130349 -116557505 - AluSq SINE Alu -3 310 1 182 191 206 15 chr2 134131400 134131468 -116556386 - MIR3 SINE MIR -9 199 119 438 283 91 30 chr2 134132821 134133019 -116554835 + MIR SINE MIR 37 246 -16 28 0 0 0 chr2 134134321 134134349 -116553505 + AT_rich Low_complexity Low_complexity 1 28 0 1887 110 38 54 chr2 134134597 134134914 -116552940 + AluSx SINE Alu 1 312 0 677 193 0 0 chr2 134135024 134135138 -116552716 + FLAM_A SINE Alu 26 139 -3 2501 207 72 34 chr2 134135238 134135638 -116552216 + L1MB7 LINE L1 4549 4985 -1161 2260 90 10 0 chr2 134135638 134135928 -116551926 + AluY SINE Alu 3 295 -16 2501 207 72 34 chr2 134135928 134136183 -116551671 + L1MB7 LINE L1 4985 5229 -917 * 2986 165 70 74 chr2 134136171 134136898 -116550956 + L1MB7 LINE L1 5439 6162 -22 1144 107 0 0 chr2 134136947 134137097 -116550757 + AluSq/x SINE Alu 1 150 -162 835 117 33 0 chr2 134137222 134137342 -116550512 - FLAM_C SINE Alu -19 124 1 21 0 0 0 chr2 134137555 134137576 -116550278 + AT_rich Low_complexity Low_complexity 1 21 0 2431 85 3 0 chr2 134138087 134138394 -116549460 + AluSp SINE Alu 1 308 -5 1368 113 57 0 chr2 134138404 134138598 -116549256 + AluSx SINE Alu 1 205 -107 260 256 139 0 chr2 134138978 134139064 -116548790 + MARNA DNA Mariner 135 232 -354 1690 153 8 8 chr2 134140536 134140804 -116547050 + AluJb SINE Alu 39 306 -6 1721 174 56 33 chr2 134140838 134141351 -116546503 + L1MB8 LINE L1 5606 6165 -9 908 251 99 40 chr2 134141351 134141825 -116546029 + L1MC5 LINE L1 7030 7531 -430 342 215 28 80 chr2 134141893 134141915 -116545939 + L1ME3A LINE L1 5958 5980 -190 2179 104 0 7 chr2 134141915 134142214 -116545640 + AluSg SINE Alu 1 297 -13 342 215 28 80 chr2 134142214 134142351 -116545503 + L1ME3A LINE L1 5980 6119 -51 232 245 105 47 chr2 134142826 134142933 -116544921 + MIR SINE MIR 19 131 -102 347 250 13 0 chr2 134143069 134143145 -116544709 - MER3 DNA MER1_type -132 77 1 2178 122 0 0 chr2 134143353 134143665 -116544189 - AluSx SINE Alu 0 312 1 2277 103 0 0 chr2 134145010 134145310 -116542544 + AluSx SINE Alu 1 300 -12 282 73 0 0 chr2 134148136 134148177 -116539677 + (GGGGA)n Simple_repeat Simple_repeat 5 45 0 1741 141 24 0 chr2 134148867 134149158 -116538696 + AluJo SINE Alu 1 298 -14 983 185 273 13 chr2 134149369 134149607 -116538247 + AluJb SINE Alu 1 300 -2 3057 232 86 24 chr2 134149620 134150006 -116537848 + L1MC4a LINE L1 3933 4294 -1852 1315 153 44 13 chr2 134150006 134150235 -116537619 - MER46A DNA MER2_type 0 236 1 3057 232 86 24 chr2 134150235 134150253 -116537601 + L1MC4a LINE L1 4294 4309 -1837 2054 145 3 0 chr2 134150253 134150550 -116537304 + AluSx SINE Alu 1 298 -14 3057 232 86 24 chr2 134150550 134151254 -116536600 + L1MC4a LINE L1 4309 5167 -979 2415 84 0 13 chr2 134151254 134151563 -116536291 + AluSx SINE Alu 1 305 -7 1148 76 6 47 chr2 134151563 134151735 -116536119 + AluSq SINE Alu 134 298 -15 356 200 141 0 chr2 134151737 134151822 -116536032 + L1MC4a LINE L1 5159 5255 -891 9765 143 25 10 chr2 134151827 134153456 -116534398 + L1MA1 LINE L1 3529 5220 -1082 2100 89 7 7 chr2 134153456 134153748 -116534106 + AluY SINE Alu 1 292 -19 9765 143 25 10 chr2 134153748 134154844 -116533010 + L1MA1 LINE L1 5220 6298 -4 851 102 8 0 chr2 134154875 134155003 -116532851 + L1MC4a LINE L1 5272 5400 -2385 3967 122 76 3 chr2 134155015 134155607 -116532247 + MER41B LTR ERV1 1 635 0 297 225 144 69 chr2 134155607 134155780 -116532074 + L1MC4a LINE L1 5690 5875 -1933 1429 145 70 0 chr2 134156639 134156880 -116530974 + MLT1B LTR MaLR 1 258 -132 575 284 75 54 chr2 134157130 134157465 -116530389 + L2 LINE L2 2268 2609 -705 675 226 74 53 chr2 134157645 134157720 -116530134 - MLT1C LTR MaLR -46 421 349 2285 119 159 8 chr2 134157720 134158090 -116529764 + MSTC LTR MaLR 3 428 0 675 226 74 53 chr2 134158090 134158204 -116529650 - MLT1C LTR MaLR -118 349 228 1891 127 74 12 chr2 134158238 134158562 -116529292 - L1MA2 LINE L1 0 6304 5961 1093 199 53 38 chr2 134158664 134158926 -116528928 + MLT1-int LTR MaLR 395 660 -711 438 20 0 0 chr2 134158949 134159000 -116528854 + (TAG)n Simple_repeat Simple_repeat 2 52 0 512 278 115 38 chr2 134159077 134159621 -116528233 - L1MEd LINE L1 -4646 1664 1043 270 248 97 0 chr2 134159625 134159738 -116528116 - L1MEd LINE L1 -5101 1018 895 492 314 5 22 chr2 134159754 134159939 -116527915 - L1MEd LINE L1 -5336 783 602 1465 232 108 35 chr2 134159954 134160380 -116527474 + MSTB2 LTR MaLR 1 457 0 311 262 121 97 chr2 134160453 134160659 -116527195 - L1MEd LINE L1 -5647 472 262 736 282 32 9 chr2 134160681 134160901 -116526953 + MIR SINE MIR 28 252 -10 221 167 24 0 chr2 134161390 134161432 -116526422 + L2 LINE L2 3230 3272 0 922 125 0 29 chr2 134161435 134161571 -116526283 + FLAM_C SINE Alu 2 133 0 261 0 0 0 chr2 134162007 134162036 -116525818 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr2 134163800 134163826 -116524028 + (A)n Simple_repeat Simple_repeat 1 26 0 1335 172 103 8 chr2 134164043 134164304 -116523550 + MLT1A1 LTR MaLR 2 287 -78 2069 73 8 0 chr2 134164402 134164661 -116523193 - L1PB1 LINE L1 -2 6149 5889 503 318 11 6 chr2 134166096 134166275 -116521579 + (CCA)n Simple_repeat Simple_repeat 1 180 0 186 317 43 56 chr2 134166314 134166475 -116521379 - MIR SINE MIR -35 227 69 244 254 0 14 chr2 134166588 134166659 -116521195 + GA-rich Low_complexity Low_complexity 3 72 0 195 129 0 0 chr2 134167731 134167762 -116520092 + (ATATG)n Simple_repeat Simple_repeat 3 33 0 483 286 41 12 chr2 134167804 134167975 -116519879 + MER112 DNA MER1_type 1 176 -84 1197 210 164 47 chr2 134167980 134168408 -116519446 - LTR16C LTR ERVL -13 478 1 380 214 0 34 chr2 134168415 134168503 -116519351 + MER112 DNA MER1_type 169 253 -7 264 211 0 118 chr2 134168503 134168579 -116519275 - MER113 DNA MER1_type? -2 519 453 416 19 19 0 chr2 134169141 134169194 -116518660 + (TC)n Simple_repeat Simple_repeat 1 54 0 871 162 48 0 chr2 134169864 134170031 -116517823 + MER5A DNA MER1_type 1 175 -14 1471 171 4 19 chr2 134170048 134170306 -116517548 - AluJo SINE Alu -23 289 36 190 120 0 0 chr2 134170307 134170332 -116517522 + MER5A DNA MER1_type 165 189 0 735 296 168 14 chr2 134170342 134170894 -116516960 - L2 LINE L2 0 3272 2623 524 51 25 0 chr2 134171033 134171112 -116516742 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 7665 38 56 0 chr2 134171112 134171474 -116516380 - L1PA7 LINE L1 -17 6137 5797 2374 109 3 0 chr2 134171474 134171786 -116516068 - AluSp SINE Alu 0 313 1 7665 38 56 0 chr2 134171786 134172507 -116515347 - L1PA7 LINE L1 -357 5797 5044 180 77 0 0 chr2 134172978 134173004 -116514850 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 324 0 0 0 chr2 134173599 134173635 -116514219 + (CA)n Simple_repeat Simple_repeat 2 37 0 255 131 0 98 chr2 134173695 134173756 -116514098 + MLT1B LTR MaLR 1 55 -335 472 232 0 124 chr2 134173760 134173900 -116513954 - MER112 DNA MER1_type -89 171 60 2162 126 3 0 chr2 134173900 134174202 -116513652 - AluSq SINE Alu -10 303 1 472 232 0 124 chr2 134174202 134174255 -116513599 - MER112 DNA MER1_type -200 60 2 29 47 0 0 chr2 134174279 134174322 -116513532 + AT_rich Low_complexity Low_complexity 1 43 0 5095 124 6 41 chr2 134174424 134175084 -116512770 - L1PA16 LINE L1 -9 6157 5530 2087 116 17 0 chr2 134175084 134175377 -116512477 - AluSx SINE Alu -14 298 1 5095 124 6 41 chr2 134175377 134175548 -116512306 - L1PA16 LINE L1 -636 5530 5355 329 268 10 21 chr2 134175671 134175768 -116512086 - LTR33 LTR ERVL 0 521 426 780 306 26 48 chr2 134175769 134176227 -116511627 - L2 LINE L2 -471 2843 2396 2284 97 7 13 chr2 134176517 134176826 -116511028 + AluSx SINE Alu 1 307 -5 247 184 0 0 chr2 134176940 134176978 -116510876 - LTR16A LTR ERVL -5 445 408 339 264 113 19 chr2 134177624 134177730 -116510124 + MIR3 SINE MIR 50 165 -43 1073 304 87 44 chr2 134177907 134178434 -116509420 - LTR67 LTR ERVL -2 555 6 429 270 20 40 chr2 134178435 134178587 -116509267 - MIR SINE MIR -112 150 2 476 296 177 38 chr2 134178758 134179227 -116508627 - LTR67 LTR ERVL -2 555 22 644 250 36 101 chr2 134179700 134179948 -116507906 - MIR SINE MIR -2 260 29 1642 147 69 0 chr2 134180066 134180464 -116507390 - L1M2 LINE L1 -735 5577 5153 3597 156 55 70 chr2 134180464 134180792 -116507062 - L1M2 LINE L1 -1431 4715 4383 2157 119 0 17 chr2 134180792 134181094 -116506760 + AluSg SINE Alu 2 298 -12 3597 156 55 70 chr2 134181094 134181605 -116506249 - L1M2 LINE L1 -1763 4383 3889 4453 119 29 6 chr2 134181607 134182290 -116505564 + L1MA8 LINE L1 5587 6285 -6 301 212 0 61 chr2 134182467 134182533 -116505321 + MIR3 SINE MIR 126 187 -21 24 91 0 0 chr2 134183243 134183309 -116504545 + AT_rich Low_complexity Low_complexity 1 66 0 1844 136 0 0 chr2 134183646 134183910 -116503944 + AluSx SINE Alu 33 296 -16 32 19 0 37 chr2 134184342 134184371 -116503483 + AT_rich Low_complexity Low_complexity 1 29 -23 1728 174 3 33 chr2 134184371 134184670 -116503184 + AluJo SINE Alu 1 290 -22 32 19 0 37 chr2 134184670 134184694 -116503160 + AT_rich Low_complexity Low_complexity 29 52 0 597 170 0 0 chr2 134185031 134185131 -116502723 - MIR SINE MIR -4 258 159 1897 148 7 10 chr2 134187618 134187916 -116499938 + AluSx SINE Alu 1 297 -15 273 167 42 62 chr2 134187965 134188061 -116499793 - L1ME4a LINE L1 -34 6087 5994 290 263 0 11 chr2 134188149 134188244 -116499610 - L1ME4a LINE L1 -267 5854 5761 265 245 30 36 chr2 134188310 134188427 -116499427 + L1MC5 LINE L1 7825 7995 0 615 285 79 23 chr2 134189459 134189673 -116498181 + MIR SINE MIR 37 262 0 1080 95 38 0 chr2 134189760 134189918 -116497936 + L1PA15 LINE L1 5999 6162 -3 411 290 67 7 chr2 134191530 134191682 -116496172 - MIR SINE MIR -64 144 7 2261 139 0 0 chr2 134192072 134192381 -116495473 - AluSx SINE Alu -3 309 1 548 295 35 17 chr2 134192495 134192668 -116495186 + MIR3 SINE MIR 32 207 -1 2150 95 0 11 chr2 134192826 134193136 -116494718 - AluSx SINE Alu 0 307 1 504 211 66 59 chr2 134193191 134193330 -116494524 - L2 LINE L2 0 3313 3171 189 0 0 0 chr2 134193330 134193351 -116494503 + (TA)n Simple_repeat Simple_repeat 1 21 0 504 211 66 59 chr2 134193351 134193363 -116494491 - L2 LINE L2 -142 3171 3161 354 261 15 62 chr2 134193368 134193498 -116494356 - L2 LINE L2 -532 2782 2659 353 202 294 0 chr2 134193967 134194086 -116493768 - MIR SINE MIR 0 262 109 194 376 56 25 chr2 134194082 134194279 -116493575 - MIR SINE MIR -4 258 56 * 1553 169 118 28 chr2 134194699 134195055 -116492799 - MLT1B LTR MaLR -2 388 1 347 208 0 154 chr2 134195166 134195296 -116492558 + MER102a DNA MER1_type 220 329 -1 285 51 0 0 chr2 134195298 134195337 -116492517 + (CA)n Simple_repeat Simple_repeat 2 40 0 378 306 68 65 chr2 134195337 134195584 -116492270 - L1ME4a LINE L1 -206 5915 5665 2033 138 0 10 chr2 134195584 134195880 -116491974 - AluSc SINE Alu -16 293 1 378 306 68 65 chr2 134195880 134195926 -116491928 - L1ME4a LINE L1 -456 5665 5621 287 330 11 23 chr2 134196583 134196671 -116491183 + MIR SINE MIR 2 88 -174 977 263 118 35 chr2 134198082 134198626 -116489228 + HAL1 LINE L1 1809 2397 -110 1651 159 34 0 chr2 134198641 134198905 -116488949 - AluJb SINE Alu -29 283 11 21 0 0 0 chr2 134199000 134199021 -116488833 + AT_rich Low_complexity Low_complexity 1 21 0 1429 197 35 64 chr2 134199403 134199429 -116488425 - MLT1F LTR MaLR -3 539 514 7092 116 41 32 chr2 134199429 134200413 -116487441 - Tigger3b DNA MER2_type -1797 1231 232 1946 138 39 0 chr2 134200413 134200696 -116487158 - AluSx SINE Alu -18 294 1 7092 116 41 32 chr2 134200696 134200931 -116486923 - Tigger3b DNA MER2_type -2796 232 1 1429 197 35 64 chr2 134200931 134201279 -116486575 - MLT1F LTR MaLR -28 514 176 243 289 0 0 chr2 134201303 134201355 -116486499 + polypurine Low_complexity Low_complexity 2 53 0 856 231 16 0 chr2 134201369 134201551 -116486303 - MLT1F LTR MaLR -382 185 1 452 301 68 101 chr2 134201552 134201944 -116485910 - MLT1F-int LTR MaLR -1 1370 1010 1978 160 0 0 chr2 134201944 134202250 -116485604 - AluJb SINE Alu -6 306 1 452 301 68 101 chr2 134202250 134202559 -116485295 - MLT1F-int LTR MaLR -361 1010 692 237 114 0 0 chr2 134202798 134202833 -116485021 - Charlie3 DNA MER1_type -2675 35 1 434 270 36 25 chr2 134202850 134203105 -116484749 - MLT1F-int LTR MaLR -1380 355 1 684 196 12 31 chr2 134203105 134203268 -116484586 - MLT1F1 LTR MaLR 0 567 408 2869 232 113 30 chr2 134203325 134204392 -116483462 - HAL1 LINE L1 -499 2008 854 551 176 10 0 chr2 134204448 134204550 -116483304 + L1MB5 LINE L1 6066 6168 -6 2013 137 3 7 chr2 134204624 134204923 -116482931 - AluSx SINE Alu -14 298 1 902 99 20 46 chr2 134205353 134205470 -116482384 + AluSq SINE Alu 26 140 -173 2063 133 0 0 chr2 134205470 134205756 -116482098 + AluSx SINE Alu 13 298 -14 902 99 20 46 chr2 134205756 134205789 -116482065 + AluSq SINE Alu 140 172 -141 399 248 85 16 chr2 134205943 134206072 -116481782 + MIR SINE MIR 50 187 -75 206 318 0 15 chr2 134206110 134206176 -116481678 + L2 LINE L2 3204 3268 -4 1517 160 45 35 chr2 134207134 134207421 -116480433 - AluJo SINE Alu -22 290 1 23 0 0 0 chr2 134208505 134208528 -116479326 + AT_rich Low_complexity Low_complexity 1 23 0 1934 157 0 0 chr2 134208536 134208822 -116479032 + AluSx SINE Alu 1 286 -26 867 93 20 12 chr2 134208822 134209070 -116478784 + (TA)n Simple_repeat Simple_repeat 1 250 0 321 336 27 0 chr2 134209623 134209733 -116478121 - L2 LINE L2 -556 2758 2646 4295 224 65 41 chr2 134209733 134209868 -116477986 + L1ME2 LINE L1 3808 3938 -2226 2431 56 7 3 chr2 134209868 134210170 -116477684 - AluY SINE Alu -8 303 1 4295 224 65 41 chr2 134210170 134211021 -116476833 + L1ME2 LINE L1 3938 4767 -1397 2064 142 7 0 chr2 134211021 134211323 -116476531 - AluSx SINE Alu -8 304 1 4295 224 65 41 chr2 134211323 134212636 -116475218 + L1ME2 LINE L1 4767 6164 0 1251 247 63 9 chr2 134212647 134213076 -116474778 + L1MC4a LINE L1 6373 6824 -984 913 198 121 44 chr2 134213077 134213350 -116474504 - MER2 DNA MER2_type 0 345 52 3211 237 48 30 chr2 134213363 134214478 -116473376 + L1MC4 LINE L1 6908 8042 0 2044 195 16 12 chr2 134214562 134215050 -116472804 - L1P5 LINE L1 -804 5342 4853 1987 112 26 6 chr2 134215041 134215380 -116472474 + L1P5 LINE L1 5327 5672 -484 * 3750 154 25 4 chr2 134215483 134216195 -116471659 + L1PB4 LINE L1 5417 6143 -13 360 0 0 0 chr2 134216431 134216471 -116471383 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 714 256 17 6 chr2 134216543 134216715 -116471139 - LTR33 LTR ERVL -343 178 5 308 301 0 44 chr2 134216810 134216923 -116470931 - L2 LINE L2 -947 2367 2260 1675 147 85 4 chr2 134217178 134217450 -116470404 - AluJo SINE Alu -12 300 7 925 178 16 73 chr2 134217604 134217851 -116470003 + L1MB7 LINE L1 1537 1769 -4615 * 1909 234 30 20 chr2 134217849 134218557 -116469297 + L1MB7 LINE L1 3134 3848 -2534 * 2906 184 46 17 chr2 134218548 134219014 -116468840 + L1MB7 LINE L1 4185 4636 -1774 1881 129 11 4 chr2 134219014 134219285 -116468569 + AluY SINE Alu 23 295 -16 284 37 74 0 chr2 134219285 134219339 -116468515 + (TA)n Simple_repeat Simple_repeat 2 59 0 2906 184 46 17 chr2 134219339 134219547 -116468307 + L1MB7 LINE L1 4636 4836 -1574 2274 119 0 0 chr2 134219547 134219841 -116468013 + AluSq SINE Alu 1 294 -19 2906 184 46 17 chr2 134219841 134220762 -116467092 + L1MB7 LINE L1 4836 5880 -530 1374 160 36 91 chr2 134220763 134221125 -116466729 + L1MB7 LINE L1 6063 6404 -16 356 261 92 77 chr2 134221334 134221541 -116466313 - L1MC/D LINE L1 -1985 5823 5614 390 325 67 0 chr2 134221585 134221705 -116466149 + L2 LINE L2 3139 3266 -6 240 154 0 0 chr2 134221822 134221874 -116465980 + T-rich Low_complexity Low_complexity 1 52 0 21 71 0 0 chr2 134221993 134222035 -116465819 + AT_rich Low_complexity Low_complexity 1 42 0 301 211 107 7 chr2 134223716 134223858 -116463996 + L1MC4a LINE L1 5754 5822 -299 24 0 0 0 chr2 134224056 134224080 -116463774 + AT_rich Low_complexity Low_complexity 1 24 0 3054 145 14 8 chr2 134224107 134224625 -116463229 + Tigger7 DNA MER2_type 2 522 -1965 373 192 179 0 chr2 134224624 134224702 -116463152 + Tigger7 DNA MER2_type 2396 2487 0 * 251 387 48 0 chr2 134224736 134224860 -116462994 - MIR3 SINE MIR -74 134 5 314 311 34 67 chr2 134227254 134227373 -116460481 - L2 LINE L2 -17 3255 3141 263 290 0 0 chr2 134227382 134227444 -116460410 + GA-rich Low_complexity Low_complexity 3 64 0 995 136 14 0 chr2 134227714 134227900 -116459954 - AluSc SINE Alu 0 319 132 2096 112 11 0 chr2 134227900 134228187 -116459667 - AluSc SINE Alu -19 290 1 402 217 159 125 chr2 134228206 134228293 -116459561 - L2 LINE L2 -556 2758 2675 1703 140 31 75 chr2 134228293 134228615 -116459239 + AluJo SINE Alu 5 312 0 402 217 159 125 chr2 134228615 134228822 -116459032 - L2 LINE L2 -639 2675 2454 303 259 0 0 chr2 134228860 134228945 -116458909 - L1ME LINE L1 -339 5782 5698 1448 253 61 37 chr2 134229196 134229548 -116458306 - L2 LINE L2 -854 2460 2093 1472 57 0 6 chr2 134229548 134229725 -116458129 + AluSg/x SINE Alu 123 298 -12 1448 253 61 37 chr2 134229725 134229830 -116458024 - L2 LINE L2 -1221 2093 1992 539 313 35 83 chr2 134230444 134230808 -116457046 - L2 LINE L2 0 3272 2930 792 104 96 0 chr2 134231084 134231209 -116456645 + LTR47A LTR ERVL 316 452 0 4644 94 4 2 chr2 134231352 134232070 -116455784 + L1MA2 LINE L1 5213 5932 -372 191 235 0 39 chr2 134232936 134232987 -116454867 - MER5B DNA MER1_type 0 178 130 492 154 96 122 chr2 134233025 134233139 -116454715 - MER53 DNA DNA -2 187 78 2174 130 0 3 chr2 134233139 134233446 -116454408 - AluSx SINE Alu -6 306 1 492 154 96 122 chr2 134233446 134233519 -116454335 - MER53 DNA DNA -111 78 5 434 168 46 69 chr2 134233554 134233685 -116454169 + MER65B LTR ERV1 1 128 -403 299 219 14 27 chr2 134234045 134234118 -116453736 + MER5B DNA MER1_type 107 178 0 1762 155 3 21 chr2 134234145 134234435 -116453419 + AluJo SINE Alu 1 285 -27 319 143 129 0 chr2 134234435 134234505 -116453349 - L1MC4 LINE L1 -1350 6692 6614 187 43 0 0 chr2 134234606 134234629 -116453225 + (TTTA)n Simple_repeat Simple_repeat 2 140 0 2059 116 7 14 chr2 134234629 134234913 -116452941 - AluSx SINE Alu -1 304 1 27 29 0 0 chr2 134234921 134234955 -116452899 + AT_rich Low_complexity Low_complexity 1 34 0 259 108 0 0 chr2 134235238 134235275 -116452579 - tRNA-Met-e tRNA tRNA -38 37 1 1564 221 38 30 chr2 134236383 134236394 -116451460 - MLT1I LTR MaLR -3 406 397 668 204 0 178 chr2 134236394 134236498 -116451356 - MER5A DNA MER1_type 0 189 147 1594 146 0 32 chr2 134236498 134236751 -116451103 - AluJo SINE Alu -67 245 1 668 204 0 178 chr2 134236751 134236876 -116450978 - MER5A DNA MER1_type -42 147 1 1564 221 38 30 chr2 134236876 134237262 -116450592 - MLT1I LTR MaLR -12 397 6 1059 277 91 30 chr2 134238484 134238823 -116449031 + MER115 DNA AcHobo 9 368 -325 2952 90 25 0 chr2 134239059 134239461 -116448393 - L1PA7 LINE L1 -3 6151 5740 2094 138 3 0 chr2 134239461 134239757 -116448097 - AluSx SINE Alu -15 297 1 1035 296 29 0 chr2 134239793 134240070 -116447784 + MER115 DNA AcHobo 409 693 0 1112 154 43 11 chr2 134240354 134240542 -116447312 - AluJb SINE Alu -20 292 99 5393 65 35 0 chr2 134240542 134241207 -116446647 + LTR12 LTR ERV1 1 688 0 37272 91 9 5 chr2 134241216 134246153 -116441701 + HERV17 LTR ERV1 1 4944 -1994 1974 130 25 0 chr2 134246189 134246513 -116441341 + HERV17 LTR ERV1 718 1049 -7577 1778 100 40 24 chr2 134246500 134246917 -116440937 + HERV17 LTR ERV1 1275 4471 -3314 * 6056 83 1 0 chr2 134246915 134247684 -116440170 + HERV17 LTR ERV1 7626 8395 -4 5611 89 37 49 chr2 134247688 134248520 -116439334 + LTR12 LTR ERV1 1 822 -4 1400 132 5 0 chr2 134248524 134248721 -116439133 + LTR12 LTR ERV1 379 576 -138 677 135 0 0 chr2 134248721 134248817 -116439037 - AluJb SINE Alu -212 100 5 770 265 76 5 chr2 134248880 134249103 -116438751 + MIR SINE MIR 8 246 -16 1264 254 61 17 chr2 134249254 134249664 -116438190 - L1MC4a LINE L1 -1738 6070 5643 865 85 0 0 chr2 134249691 134249797 -116438057 - AluSg/x SINE Alu -14 295 190 2216 88 28 0 chr2 134249883 134250167 -116437687 + AluSc SINE Alu 1 292 -17 1789 150 0 49 chr2 134250365 134250511 -116437343 + AluJo SINE Alu 1 126 -186 1995 85 41 34 chr2 134250511 134250804 -116437050 + AluY SINE Alu 1 295 -16 1789 150 0 49 chr2 134250804 134250963 -116436891 + AluJo SINE Alu 126 291 -21 605 176 40 24 chr2 134251223 134251348 -116436506 + L1M4b LINE L1 132 258 -6601 264 232 83 124 chr2 134251565 134251806 -116436048 - MER57A LTR ERV1 -48 355 125 350 159 87 14 chr2 134251820 134251889 -116435965 - LTR54 LTR ERV1 -432 78 5 22 0 0 0 chr2 134251894 134251916 -116435938 + AT_rich Low_complexity Low_complexity 1 22 0 188 247 110 0 chr2 134251918 134251991 -116435863 + MIR SINE MIR 182 262 0 479 302 107 5 chr2 134252115 134252330 -116435524 + L2 LINE L2 951 1187 -2127 2939 194 32 39 chr2 134252330 134253016 -116434838 + Charlie1a DNA MER1_type 82 762 -693 206 236 0 14 chr2 134253273 134253345 -116434509 + (TTATA)n Simple_repeat Simple_repeat 4 74 0 3236 154 63 13 chr2 134253348 134253979 -116433875 + Charlie1a DNA MER1_type 793 1455 0 230 293 78 0 chr2 134255215 134255331 -116432523 - MIR3 SINE MIR -24 184 60 925 234 151 133 chr2 134255460 134256010 -116431844 + MLT1K LTR MaLR 3 562 -26 2132 104 3 3 chr2 134256402 134256690 -116431164 + AluSc SINE Alu 1 288 -21 686 238 21 42 chr2 134256862 134257102 -116430752 - LTR33 LTR ERVL -10 511 277 318 254 0 0 chr2 134257120 134257187 -116430667 + MER69 DNA AcHobo 1 67 -110 850 122 9 0 chr2 134257270 134257460 -116430394 + FLAM_C SINE Alu 3 193 0 554 199 84 8 chr2 134257540 134257671 -116430183 + MER69 DNA AcHobo 2384 2524 -2 219 368 0 0 chr2 134257726 134257783 -116430071 - L2 LINE L2 -90 3182 3126 228 86 0 0 chr2 134257965 134258000 -116429854 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 1511 138 98 16 chr2 134258216 134258470 -116429384 + AluJb SINE Alu 15 289 -23 297 329 12 55 chr2 134258471 134258635 -116429219 + MER5B DNA MER1_type 21 177 -1 871 261 103 90 chr2 134258693 134259160 -116428694 + MLT1K LTR MaLR 10 482 -106 629 176 81 0 chr2 134259298 134259434 -116428420 - MIR SINE MIR -1 261 115 514 243 19 0 chr2 134260295 134260402 -116427452 - MER81 DNA DNA 0 114 6 1288 170 101 104 chr2 134260445 134260810 -116427044 - MLT1A2 LTR MaLR -2 372 9 804 157 0 50 chr2 134261075 134261215 -116426639 + AluJo SINE Alu 1 133 -179 185 152 0 0 chr2 134261291 134261324 -116426530 + L2 LINE L2 3263 3295 -18 486 216 136 37 chr2 134261605 134261767 -116426087 - MER5B DNA MER1_type 0 178 1 275 230 168 26 chr2 134262211 134262324 -116425530 - L1MC/D LINE L1 -1978 5830 5702 327 205 248 8 chr2 134262753 134262870 -116424984 + LTR33 LTR ERVL 23 167 -354 3099 229 6 6 chr2 134263099 134263746 -116424108 + MER82 DNA MER2_type 1 647 -6 1922 140 0 4 chr2 134264543 134264821 -116423033 - AluSx SINE Alu -35 277 1 2160 156 23 3 chr2 134265541 134265893 -116421961 - MLT1A1 LTR MaLR -2 363 5 511 231 8 8 chr2 134266503 134266624 -116421230 + MIR SINE MIR 34 154 -108 754 196 128 5 chr2 134266805 134267009 -116420845 + MIR SINE MIR 4 232 -30 212 266 64 43 chr2 134267102 134267196 -116420658 + MIR SINE MIR 161 256 -6 289 308 38 23 chr2 134267333 134267466 -116420388 + L2 LINE L2 3168 3302 -11 239 275 14 0 chr2 134267609 134267678 -116420176 + MIR3 SINE MIR 85 154 -54 237 399 14 21 chr2 134267759 134267902 -116419952 - L2 LINE L2 -177 3095 2954 21 0 0 0 chr2 134267956 134267977 -116419877 + AT_rich Low_complexity Low_complexity 1 21 0 745 241 0 0 chr2 134268113 134268254 -116419600 + AluJo SINE Alu 141 281 -31 358 57 19 0 chr2 134268258 134268311 -116419543 - AluJo SINE Alu -1 301 248 1403 152 5 0 chr2 134268311 134268515 -116419339 - AluJo SINE Alu -107 205 1 34 0 0 0 chr2 134268515 134268549 -116419305 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr2 134268613 134268637 -116419217 + AT_rich Low_complexity Low_complexity 1 24 0 2565 175 12 19 chr2 134269381 134269867 -116417987 + MLT1D LTR MaLR 21 503 -2 371 167 135 21 chr2 134270188 134270284 -116417570 - L1ME4a LINE L1 -24 6097 5991 738 332 30 0 chr2 134270328 134270689 -116417165 - L1ME4a LINE L1 -221 5900 5529 585 272 66 16 chr2 134270721 134270964 -116416890 + MER112 DNA MER1_type 2 256 0 1937 138 10 29 chr2 134271491 134271802 -116416052 + AluSx SINE Alu 1 305 -7 29 70 0 0 chr2 134271882 134271939 -116415915 + AT_rich Low_complexity Low_complexity 1 57 0 729 228 47 6 chr2 134272443 134272614 -116415240 - MIR SINE MIR -21 241 64 1868 102 32 29 chr2 134272614 134273092 -116414762 + MER51A LTR ERV1 1 634 0 23 0 0 0 chr2 134273442 134273465 -116414389 + AT_rich Low_complexity Low_complexity 1 23 0 2378 112 0 0 chr2 134274586 134274898 -116412956 - AluSx SINE Alu 0 312 1 1000 258 42 30 chr2 134274898 134275231 -116412623 - L1M4 LINE L1 -2265 3881 3545 1632 167 3 38 chr2 134275244 134275570 -116412284 - AluJo SINE Alu 0 321 6 546 246 97 97 chr2 134275574 134275901 -116411953 + L2 LINE L2 2686 3021 -292 2176 105 0 54 chr2 134275901 134276216 -116411638 - AluSx SINE Alu -14 298 1 546 246 97 97 chr2 134276216 134276508 -116411346 + L2 LINE L2 3021 3312 -1 328 311 50 12 chr2 134276574 134276735 -116411119 - MIR SINE MIR -36 226 60 301 304 72 41 chr2 134277135 134277329 -116410525 - MIR SINE MIR -2 260 61 939 233 125 45 chr2 134277535 134277934 -116409920 + LTR16A1 LTR ERVL 14 444 -13 328 192 58 77 chr2 134278318 134278422 -116409432 + MLT1K LTR MaLR 123 224 -364 1354 273 91 12 chr2 134278422 134278840 -116409014 + MER70B LTR ERVL 1 451 -127 280 279 54 88 chr2 134279009 134279213 -116408641 + MLT1K LTR MaLR 229 425 -163 1511 218 86 39 chr2 134279332 134279694 -116408160 + MLT1D LTR MaLR 127 505 0 226 278 0 98 chr2 134280513 134280646 -116407208 - L2 LINE L2 -1 3312 3193 474 173 15 95 chr2 134280785 134280936 -116406918 + MER74B LTR ERVL 1 193 -421 1590 161 24 45 chr2 134280937 134281266 -116406588 - AluJb SINE Alu 0 347 25 1237 222 63 23 chr2 134281282 134281629 -116406225 + MER74B LTR ERVL 188 548 -74 411 179 63 11 chr2 134281546 134281641 -116406213 - MER88 LTR ERVL -286 178 79 * 488 224 11 85 chr2 134281723 134281917 -116405937 + MIR SINE MIR 8 188 -61 275 281 42 42 chr2 134282143 134282239 -116405615 - L2 LINE L2 0 3272 3177 431 276 121 41 chr2 134282412 134282794 -116405060 - L2 LINE L2 -337 2977 2565 259 188 31 47 chr2 134282794 134282858 -116404996 - MER5B DNA MER1_type -1 177 115 6440 175 26 3 chr2 134282859 134283329 -116404525 + L1P5 LINE L1 3920 4378 -1773 342 0 0 0 chr2 134283329 134283367 -116404487 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 6440 175 26 3 chr2 134283367 134284642 -116403212 + L1P5 LINE L1 4378 5709 -442 3491 116 142 16 chr2 134285237 134285864 -116401990 + MER39 LTR ERV1 1 706 -1 334 309 0 0 chr2 134286169 134286266 -116401588 + MIR3 SINE MIR 87 183 -25 259 169 77 146 chr2 134286444 134286574 -116401280 - MER5B DNA MER1_type -31 147 27 231 211 92 57 chr2 134286573 134286601 -116401253 - MER5B DNA MER1_type -28 161 135 * 2536 65 0 0 chr2 134286601 134286894 -116400960 + AluY SINE Alu 1 293 -18 231 211 92 57 chr2 134286894 134286961 -116400893 - MER5B DNA MER1_type -54 135 63 1107 203 104 55 chr2 134287250 134287688 -116400166 - LTR56 LTR ERV1 0 445 9 318 233 27 0 chr2 134287706 134287779 -116400075 - MER5A DNA MER1_type -111 78 4 289 271 197 0 chr2 134288067 134288189 -116399665 - MIR SINE MIR 0 262 117 1073 198 144 140 chr2 134288232 134288940 -116398914 + MER20B DNA MER1_type 21 735 -48 2194 116 3 0 chr2 134288940 134289271 -116398583 + AluSx SINE Alu 1 332 0 1073 198 144 140 chr2 134289271 134289297 -116398557 + MER20B DNA MER1_type 735 759 -24 1087 201 80 4 chr2 134289297 134289561 -116398293 + L1MC3 LINE L1 7481 7764 -21 2117 253 34 93 chr2 134289572 134290473 -116397381 + L1M2 LINE L1 1 848 -6001 690 146 0 0 chr2 134290474 134290577 -116397277 - AluSq/x SINE Alu -209 103 1 936 79 14 7 chr2 134290577 134290717 -116397137 + L1PA14 LINE L1 6021 6161 0 626 226 0 9 chr2 134291778 134291893 -116395961 - MER81 DNA DNA 0 114 1 617 181 8 24 chr2 134291896 134292023 -116395831 + MER5B DNA MER1_type 40 164 -14 454 273 160 0 chr2 134292051 134292201 -116395653 - MER5A DNA MER1_type -6 183 10 237 282 86 25 chr2 134292572 134292735 -116395119 + L1ME3 LINE L1 5968 6140 -22 27 29 0 0 chr2 134292748 134292782 -116395072 + AT_rich Low_complexity Low_complexity 1 34 0 378 303 79 0 chr2 134293968 134294133 -116393721 - L1ME3A LINE L1 -5 6165 5988 338 192 64 13 chr2 134294473 134294551 -116393303 - L1ME3A LINE L1 -2030 5778 5697 359 260 75 34 chr2 134294598 134294744 -116393110 - MLT1L LTR MaLR -94 521 370 300 333 0 0 chr2 134294834 134294918 -116392936 - MLT1K LTR MaLR -321 267 184 26 0 0 0 chr2 134297575 134297601 -116390253 + AT_rich Low_complexity Low_complexity 1 26 0 660 188 301 6 chr2 134299474 134299650 -116388204 - Charlie8 DNA MER1_type -2189 228 1 3997 123 0 39 chr2 134302790 134303425 -116384429 - MER4B LTR ERV1 0 610 1 350 150 17 0 chr2 134304161 134304221 -116383633 + AluS SINE Alu 1 61 -247 212 243 75 37 chr2 134304540 134304647 -116383207 + L2 LINE L2 2933 3043 -229 556 279 54 0 chr2 134305262 134305409 -116382445 - MER91A DNA MER1_type -7 189 35 390 200 12 0 chr2 134305801 134305886 -116381968 - MLT1L LTR MaLR 0 615 530 619 287 75 5 chr2 134305916 134306104 -116381750 - MLT1L LTR MaLR -66 549 349 402 261 31 8 chr2 134306185 134306315 -116381539 - MLT1L LTR MaLR -369 246 114 314 296 211 0 chr2 134307198 134307340 -116380514 - MIR SINE MIR -72 190 19 333 318 57 0 chr2 134308282 134308458 -116379396 + L1ME4a LINE L1 5936 6121 0 3640 134 37 25 chr2 134308602 134309230 -116378624 + MER41B LTR ERV1 1 635 0 1668 250 91 53 chr2 134309232 134310261 -116377593 + L2 LINE L2 2193 3257 -56 2645 146 83 21 chr2 134310292 134310773 -116377081 - MER41E LTR ERV1 -1 511 1 2381 157 119 2 chr2 134310864 134311316 -116376538 + MLT1D LTR MaLR 1 505 0 210 235 35 71 chr2 134311346 134311431 -116376423 + MIR3 SINE MIR 114 195 -13 1134 266 131 35 chr2 134311611 134312070 -116375784 - L1MC4a LINE L1 -1867 5941 5439 320 329 68 52 chr2 134312084 134312467 -116375387 - L1MC4a LINE L1 -743 5403 5015 1468 27 11 16 chr2 134312489 134312676 -116375178 - L1PA6 LINE L1 0 6154 5969 21 36 0 0 chr2 134312837 134312865 -116374989 + AT_rich Low_complexity Low_complexity 1 28 0 2059 121 42 0 chr2 134313129 134313418 -116374436 + AluSx SINE Alu 1 301 -11 265 318 107 54 chr2 134314510 134314790 -116373064 + L2 LINE L2 2807 3101 -171 1907 121 3 48 chr2 134315820 134316091 -116371763 - MLT1B LTR MaLR -90 300 43 2388 87 0 3 chr2 134316091 134316389 -116371465 - AluSx SINE Alu -15 297 1 1907 121 3 48 chr2 134316389 134316431 -116371423 - MLT1B LTR MaLR -347 43 1 271 254 37 116 chr2 134316478 134316667 -116371187 + L1MEd LINE L1 342 515 -5604 230 270 82 61 chr2 134316667 134316863 -116370991 - LTR16A LTR ERVL -2 448 249 287 243 102 40 chr2 134316889 134317066 -116370788 - LTR16A1 LTR ERVL -266 191 4 667 298 111 27 chr2 134317071 134317440 -116370414 + L1MEd LINE L1 511 910 -5209 2037 267 89 21 chr2 134317520 134318431 -116369423 - HAL1 LINE L1 -74 2433 1461 1022 261 69 71 chr2 134318460 134318655 -116369199 - HAL1 LINE L1 -1330 1177 983 1973 146 0 3 chr2 134318655 134318949 -116368905 - AluJb SINE Alu -15 297 5 1022 261 69 71 chr2 134318949 134319358 -116368496 - HAL1 LINE L1 -1524 983 574 21 0 0 0 chr2 134319377 134319398 -116368456 + AT_rich Low_complexity Low_complexity 1 21 0 1045 180 30 34 chr2 134319498 134319731 -116368123 - L1M3f LINE L1 -5042 286 55 301 298 80 26 chr2 134320212 134320363 -116367491 + L2 LINE L2 2469 2627 -687 3682 209 38 10 chr2 134320393 134321270 -116366584 - L1MB7 LINE L1 -10 6174 5274 1496 180 46 55 chr2 134321257 134321623 -116366231 - L1MB7 LINE L1 -1868 4278 3916 * 300 239 152 22 chr2 134321644 134321782 -116366072 - MLT2E LTR ERVL -57 571 416 2117 137 0 0 chr2 134321868 134322167 -116365687 - AluSx SINE Alu -13 299 1 4008 136 22 3 chr2 134322173 134322814 -116365040 - L1MB3 LINE L1 0 6183 5531 234 62 0 0 chr2 134322853 134322885 -116364969 + (T)n Simple_repeat Simple_repeat 1 32 0 339 235 78 10 chr2 134324016 134324118 -116363736 + MER91C DNA MER1_type 6 114 -26 333 0 0 0 chr2 134324171 134324208 -116363646 + (CAA)n Simple_repeat Simple_repeat 2 38 0 318 286 87 16 chr2 134324322 134324448 -116363406 - L2 LINE L2 0 3313 3179 2473 74 0 0 chr2 134324470 134324767 -116363087 - AluY SINE Alu -14 297 1 2328 105 0 0 chr2 134324771 134325065 -116362789 - AluSx SINE Alu -18 294 1 2349 196 5 16 chr2 134325091 134325536 -116362318 - MER49 LTR ERV1 0 923 484 2110 146 0 9 chr2 134325536 134325851 -116362003 + AluSx SINE Alu 1 312 0 2098 116 22 10 chr2 134325995 134326306 -116361548 - MER49 LTR ERV1 -429 494 180 446 252 97 35 chr2 134327135 134327212 -116360642 + MIR SINE MIR 28 99 -163 887 267 141 32 chr2 134327212 134327767 -116360087 - MLT1L LTR MaLR 0 615 1 446 252 97 35 chr2 134327767 134327893 -116359961 + MIR SINE MIR 99 246 -16 242 313 143 7 chr2 134328014 134328161 -116359693 - L2 LINE L2 -702 2612 2446 2305 97 3 10 chr2 134328178 134328488 -116359366 - AluSx SINE Alu -2 310 3 1822 161 6 29 chr2 134329200 134329516 -116358338 - AluJb SINE Alu -3 309 1 744 179 17 29 chr2 134329547 134329720 -116358134 - MER5B DNA MER1_type 0 178 8 2867 138 24 8 chr2 134330220 134330728 -116357126 - L1MA4 LINE L1 -11 7708 7193 1165 122 161 0 chr2 134330934 134331252 -116356602 - AluSg/x SINE Alu 0 421 75 11821 180 33 71 chr2 134331252 134332251 -116355603 - L1MA4 LINE L1 -521 7198 6163 1150 147 0 0 chr2 134332251 134332421 -116355433 - AluSg/x SINE Alu -6 306 137 11821 180 33 71 chr2 134332421 134333048 -116354806 - L1MA4 LINE L1 -1556 6163 5514 1810 194 0 0 chr2 134333048 134333358 -116354496 - AluJb SINE Alu 0 312 3 11821 180 33 71 chr2 134333358 134333767 -116354087 - L1MA4 LINE L1 -2205 5514 5091 2287 103 0 7 chr2 134333767 134334069 -116353785 - AluSc SINE Alu -9 300 1 11821 180 33 71 chr2 134334069 134334480 -116353374 - L1MA4 LINE L1 -2628 5091 4666 2348 168 18 25 chr2 134334480 134334915 -116352939 + MSTB1 LTR MaLR 1 432 0 11821 180 33 71 chr2 134334915 134335205 -116352649 - L1MA4 LINE L1 -3053 4666 4367 1851 155 13 7 chr2 134335205 134335508 -116352346 - AluJb SINE Alu -7 305 1 11821 180 33 71 chr2 134335508 134337081 -116350773 - L1MA4 LINE L1 -3352 4367 3009 180 0 0 0 chr2 134337081 134337101 -116350753 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 11821 180 33 71 chr2 134337101 134337892 -116349962 - L1MA4 LINE L1 -4710 3009 2190 41633 70 7 3 chr2 134337893 134343583 -116344271 + L1P2 LINE L1 1 5718 -436 22 35 0 0 chr2 134343754 134343783 -116344071 + AT_rich Low_complexity Low_complexity 1 29 0 748 188 8 16 chr2 134343783 134343911 -116343943 - FLAM_C SINE Alu -6 127 1 1486 171 52 28 chr2 134344106 134344393 -116343461 - AluJo SINE Alu -18 294 1 417 309 34 43 chr2 134344471 134344704 -116343150 - L1MC4a LINE L1 -1961 5847 5617 542 258 15 4 chr2 134344804 134344950 -116342904 + MER5B DNA MER1_type 46 178 0 402 246 62 39 chr2 134344981 134345111 -116342743 + MER5A DNA MER1_type 1 133 -56 2369 149 15 13 chr2 134345372 134345715 -116342139 - MLT1B LTR MaLR 0 390 44 2680 141 62 0 chr2 134345715 134346118 -116341736 - MSTA LTR MaLR 0 428 1 2369 149 15 13 chr2 134346118 134346163 -116341691 - MLT1B LTR MaLR -346 44 1 320 192 58 77 chr2 134346175 134346279 -116341575 + MLT1K LTR MaLR 123 224 -364 2163 104 7 26 chr2 134346567 134346875 -116340979 - AluSq SINE Alu -11 302 1 1052 271 85 18 chr2 134346891 134347289 -116340565 - HAL1 LINE L1 -1973 534 110 409 17 17 17 chr2 134347540 134347599 -116340255 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 1880 133 3 11 chr2 134347601 134347886 -116339968 - AluSq SINE Alu -30 283 1 297 274 49 10 chr2 134347886 134347988 -116339866 - HAL1 LINE L1 -2400 107 2 302 313 101 44 chr2 134348027 134348254 -116339600 + L1MEd LINE L1 1229 1468 -4904 829 299 48 5 chr2 134348350 134348855 -116338999 + L1MEd LINE L1 2327 2850 -3532 1940 138 3 7 chr2 134348985 134349282 -116338572 - AluSx SINE Alu -16 296 1 284 268 14 49 chr2 134349284 134349426 -116338428 - MER104 DNA Tc2 -15 165 29 392 248 77 8 chr2 134349430 134349547 -116338307 + MER112 DNA MER1_type 136 260 0 261 244 83 51 chr2 134349664 134349820 -116338034 + L1MEd LINE L1 3009 3169 -3213 341 273 105 33 chr2 134349875 134350209 -116337645 + L1MEd LINE L1 3319 3676 -2706 1169 192 4 48 chr2 134350232 134350461 -116337393 + MER20 DNA MER1_type 1 219 0 1259 268 109 80 chr2 134350462 134350806 -116337048 + L1MEd LINE L1 3755 4088 -2294 1896 81 0 0 chr2 134350806 134351040 -116336814 + AluSq SINE Alu 68 301 -12 1259 268 109 80 chr2 134351040 134351427 -116336427 + L1MEd LINE L1 4088 4462 -1920 2139 106 0 0 chr2 134351427 134351702 -116336152 + AluSq SINE Alu 1 275 -38 1259 268 109 80 chr2 134351702 134352434 -116335420 + L1MEd LINE L1 4462 5271 -1111 1983 124 38 3 chr2 134352434 134352724 -116335130 - AluSq SINE Alu -13 300 1 1259 268 109 80 chr2 134352724 134352843 -116335011 + L1MEd LINE L1 5271 5385 -997 307 344 78 11 chr2 134352938 134353118 -116334736 - HAL1b LINE L1 -1095 253 62 2246 80 7 7 chr2 134353128 134353416 -116334438 + AluSx SINE Alu 3 290 -22 230 324 65 36 chr2 134354156 134354295 -116333559 - L3 LINE CR1 -98 1479 1337 620 310 65 4 chr2 134354317 134354546 -116333308 - MIR SINE MIR -5 257 15 470 310 132 16 chr2 134354606 134354864 -116332990 - L3 LINE CR1 -350 1227 940 2155 109 7 10 chr2 134354872 134355176 -116332678 - AluSq SINE Alu -8 305 3 21 0 0 0 chr2 134355226 134355247 -116332607 + AT_rich Low_complexity Low_complexity 1 21 0 1527 156 30 114 chr2 134355640 134356045 -116331809 + MLT1A2 LTR MaLR 1 371 -3 1417 208 60 81 chr2 134356149 134356631 -116331223 - MLT1D LTR MaLR 0 505 34 238 286 120 36 chr2 134356671 134356863 -116330991 - L2 LINE L2 -1314 2000 1793 276 303 0 0 chr2 134356911 134356977 -116330877 + (TG)n Simple_repeat Simple_repeat 2 67 0 2246 109 7 0 chr2 134357919 134358212 -116329642 + AluSx SINE Alu 1 295 -17 2011 138 0 0 chr2 134358272 134358554 -116329300 + AluSx SINE Alu 1 282 -30 288 0 0 0 chr2 134358557 134358589 -116329265 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1240 141 36 102 chr2 134359024 134359097 -116328757 - MER33 DNA MER1_type -2261 324 248 2295 114 3 0 chr2 134359097 134359404 -116328450 + AluSx SINE Alu 3 310 -2 1240 141 36 102 chr2 134359404 134359663 -116328191 - MER33 DNA MER1_type -2337 248 14 341 260 201 59 chr2 134361075 134361317 -116326537 - HAL1 LINE L1 -7 2500 2294 2105 203 101 15 chr2 134361317 134361791 -116326063 + LTR40a LTR ERVL 4 518 -1 341 260 201 59 chr2 134361791 134361921 -116325933 - HAL1 LINE L1 -213 2294 2075 233 284 45 0 chr2 134362264 134362331 -116325523 + MLT1J2 LTR MaLR 72 141 -309 2256 96 3 3 chr2 134363556 134363859 -116323995 - AluSc SINE Alu -6 303 1 393 306 81 12 chr2 134364327 134364487 -116323367 + MIR SINE MIR 69 239 -23 2828 124 69 13 chr2 134365071 134365521 -116322333 - L1MC1 LINE L1 0 6333 5859 1699 178 16 23 chr2 134365628 134365932 -116321922 - AluJo SINE Alu -10 302 1 1457 249 69 49 chr2 134365934 134366145 -116321709 - L1MEc LINE L1 -4072 2324 2119 1965 111 42 7 chr2 134366145 134366433 -116321421 - AluSq SINE Alu -15 298 1 1457 249 69 49 chr2 134366433 134366900 -116320954 - L1MEc LINE L1 -4277 2119 1632 981 186 16 5 chr2 134366900 134367094 -116320760 - L1MD2 LINE L1 -3 6356 6161 182 114 0 29 chr2 134367411 134367446 -116320408 + (TG)n Simple_repeat Simple_repeat 1 34 0 235 314 146 41 chr2 134367912 134368329 -116319525 - L2 LINE L2 -810 2504 2044 1771 173 11 97 chr2 134368854 134369045 -116318809 - MSTD LTR MaLR 0 396 190 189 0 0 0 chr2 134369045 134369066 -116318788 + (GA)n Simple_repeat Simple_repeat 1 21 0 1771 173 11 97 chr2 134369066 134369077 -116318777 - MSTD LTR MaLR -206 190 180 180 77 0 0 chr2 134369077 134369103 -116318751 + (TG)n Simple_repeat Simple_repeat 1 26 0 1771 173 11 97 chr2 134369103 134369332 -116318522 - MSTD LTR MaLR -216 180 1 1602 217 24 41 chr2 134370315 134370604 -116317250 - MLT1A1 LTR MaLR 0 365 82 2367 69 0 50 chr2 134370604 134370923 -116316931 - AluY SINE Alu -8 303 1 1602 217 24 41 chr2 134370923 134371002 -116316852 - MLT1A1 LTR MaLR -283 82 3 648 110 0 0 chr2 134371546 134371628 -116316226 + AluS SINE Alu 2 83 -229 721 242 39 0 chr2 134371864 134372046 -116315808 + MER5A DNA MER1_type 1 189 0 320 113 145 0 chr2 134374434 134374496 -116313358 + AluSp/q SINE Alu 223 293 -10 544 285 79 8 chr2 134374716 134374930 -116312924 + MIR SINE MIR 8 229 -33 896 176 198 0 chr2 134375156 134375343 -116312511 - MER58A DNA MER1_type 0 224 1 4402 155 59 37 chr2 134376861 134376934 -116310920 + MER6 DNA MER2_type -18 52 -813 4947 108 6 48 chr2 134376934 134377655 -116310199 + LTR8 LTR ERV1 2 691 0 4402 155 59 37 chr2 134377655 134377970 -116309884 + MER6 DNA MER2_type 52 358 -507 195 100 0 0 chr2 134377970 134378000 -116309854 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 4402 155 59 37 chr2 134378000 134378477 -116309377 + MER6 DNA MER2_type 358 865 0 780 384 31 71 chr2 134378549 134379198 -116308656 - L1MC4a LINE L1 -1871 5937 5315 21 0 0 0 chr2 134379359 134379380 -116308474 + AT_rich Low_complexity Low_complexity 1 21 0 244 280 64 16 chr2 134379639 134379653 -116308201 + LTR24C LTR ERV1 348 360 -275 421 228 0 11 chr2 134379653 134379745 -116308109 + MER58C DNA MER1_type 113 203 -12 244 280 64 16 chr2 134379745 134379764 -116308090 + LTR24C LTR ERV1 360 478 -157 297 303 91 53 chr2 134379908 134380283 -116307571 + L1ME LINE L1 5354 5748 -373 2440 216 58 52 chr2 134380283 134380884 -116306970 + MER77 LTR ERV1 1 605 0 297 303 91 53 chr2 134380884 134380924 -116306930 + L1ME LINE L1 5748 5785 -336 884 252 99 0 chr2 134381056 134381278 -116306576 - MIR SINE MIR -17 245 2 302 298 94 30 chr2 134381520 134381755 -116306099 - L1MC4a LINE L1 -1311 4835 4586 220 254 51 0 chr2 134382041 134382100 -116305754 - L2 LINE L2 0 3313 3252 488 294 34 40 chr2 134382100 134382277 -116305577 + MIR SINE MIR 44 219 -43 811 272 92 38 chr2 134383732 134384100 -116303754 + L2 LINE L2 2913 3300 -13 927 178 51 15 chr2 134384439 134384636 -116303218 - ORSL DNA AcHobo -3 272 69 311 167 0 0 chr2 134384725 134384773 -116303081 - ORSL DNA AcHobo -225 50 3 759 112 0 0 chr2 134385092 134385199 -116302655 - MSTC LTR MaLR -321 107 1 495 240 23 8 chr2 134385601 134385730 -116302124 - L2 LINE L2 -2 3311 3181 213 111 0 28 chr2 134385783 134385819 -116302035 + (TG)n Simple_repeat Simple_repeat 2 36 0 941 140 0 22 chr2 134385905 134386041 -116301813 + FLAM_C SINE Alu 1 133 0 1641 185 73 15 chr2 134386098 134386439 -116301415 - MLT1A1 LTR MaLR -1 364 4 198 0 0 0 chr2 134386701 134386723 -116301131 + (T)n Simple_repeat Simple_repeat 1 22 0 2172 110 0 22 chr2 134386789 134387106 -116300748 - AluSx SINE Alu -2 310 1 736 262 103 9 chr2 134387156 134387370 -116300484 + MIR SINE MIR 1 234 -28 18650 40 4 1 chr2 134387615 134389871 -116297983 + L1P LINE L1 3140 5403 -743 478 325 97 21 chr2 134389998 134390423 -116297431 + L2 LINE L2 2459 2915 -399 1234 175 30 17 chr2 134390532 134390766 -116297088 - AluJo SINE Alu -15 297 61 411 228 89 49 chr2 134390800 134390923 -116296931 + L2 LINE L2 3179 3306 -7 1751 144 37 107 chr2 134391164 134391538 -116296316 + MER7A DNA MER2_type 1 346 0 2165 112 0 0 chr2 134391587 134391874 -116295980 + AluY SINE Alu 1 287 -24 2299 146 16 36 chr2 134392466 134392661 -116295193 - L1PA16 LINE L1 -4 6162 5977 2165 133 0 0 chr2 134392661 134392963 -116294891 - AluSq SINE Alu -11 302 1 2299 146 16 36 chr2 134392963 134393152 -116294702 - L1PA16 LINE L1 -189 5977 5786 3953 188 9 9 chr2 134393161 134393907 -116293947 + L1P LINE L1 3424 4169 -1977 22951 43 46 2 chr2 134393909 134396755 -116291099 + L1P LINE L1 1 2969 -3177 190 336 92 61 chr2 134397025 134397254 -116290600 + L2 LINE L2 1860 2095 -1219 686 83 0 0 chr2 134397546 134397630 -116290224 - AluSp/q SINE Alu -17 296 213 288 248 124 7 chr2 134397915 134398068 -116289786 - L1ME4a LINE L1 -87 6034 5864 270 136 0 0 chr2 134398154 134398198 -116289656 + (TCCCC)n Simple_repeat Simple_repeat 2 45 0 1841 126 65 4 chr2 134398203 134398481 -116289373 - AluSq SINE Alu -18 295 1 2158 117 10 0 chr2 134398706 134399005 -116288849 - AluSx SINE Alu -10 302 1 320 220 50 58 chr2 134399083 134399230 -116288624 - L1P LINE L1 -758 5408 5255 313 139 14 14 chr2 134399992 134400064 -116287790 + CT-rich Low_complexity Low_complexity 1 72 0 2160 165 91 54 chr2 134400479 134400785 -116287069 + MLT1D LTR MaLR 1 383 -172 2554 81 0 0 chr2 134400785 134401095 -116286759 + AluSx SINE Alu 1 310 -2 2160 165 91 54 chr2 134401095 134401274 -116286580 + MLT1D LTR MaLR 383 554 -1 22 0 0 0 chr2 134402239 134402261 -116285593 + AT_rich Low_complexity Low_complexity 1 22 0 2135 126 0 3 chr2 134402261 134402563 -116285291 - AluSx SINE Alu -11 301 1 2498 60 39 15 chr2 134402564 134402895 -116284959 - L1PA13 LINE L1 -1 6162 5824 2194 106 3 0 chr2 134403410 134403703 -116284151 - AluSp SINE Alu -18 295 2 1515 95 0 10 chr2 134404227 134404427 -116283427 + AluSq SINE Alu 103 300 -13 6497 216 68 31 chr2 134404893 134405269 -116282585 - L1ME1 LINE L1 -5 6161 5800 2532 61 0 10 chr2 134405269 134405581 -116282273 - AluY SINE Alu -2 309 1 6497 216 68 31 chr2 134405581 134406633 -116281221 - L1ME1 LINE L1 -366 5800 4788 2356 89 3 3 chr2 134406633 134406936 -116280918 + AluSp SINE Alu 1 303 -10 6497 216 68 31 chr2 134406936 134408109 -116279745 - L1ME1 LINE L1 -1378 4788 3457 631 201 135 15 chr2 134408130 134408389 -116279465 - L1ME1 LINE L1 -2920 3226 2937 20181 28 0 7 chr2 134408489 134411548 -116276306 + L1PA2 LINE L1 3137 6189 0 344 189 27 27 chr2 134411548 134411622 -116276232 + L1 LINE L1 4158 4231 -1915 21 107 0 0 chr2 134411691 134411775 -116276079 + AT_rich Low_complexity Low_complexity 1 84 0 444 250 57 83 chr2 134411827 134412024 -116275830 - L1ME4a LINE L1 -119 6002 5814 1690 186 34 0 chr2 134412024 134412320 -116275534 - AluJo SINE Alu -6 306 1 444 250 57 83 chr2 134412320 134412422 -116275432 - L1ME4a LINE L1 -307 5814 5711 2079 194 130 69 chr2 134413502 134413704 -116274150 + LTR1B LTR ERV1 1 189 -637 411 21 0 0 chr2 134413704 134413752 -116274102 + (GAGAA)n Simple_repeat Simple_repeat 5 52 0 2079 194 130 69 chr2 134413752 134414288 -116273566 + LTR1B LTR ERV1 189 784 -42 434 251 78 0 chr2 134414851 134415005 -116272849 - MIR SINE MIR -1 207 35 1872 160 18 0 chr2 134415310 134415609 -116272245 + AluSx SINE Alu 3 306 0 2142 113 7 0 chr2 134415677 134415961 -116271893 + AluSx SINE Alu 10 295 -17 1675 209 30 9 chr2 134416124 134416578 -116271276 - L1MD2 LINE L1 -361 6392 6045 805 200 0 0 chr2 134416580 134416715 -116271139 - MER58B DNA MER1_type 0 341 207 4274 227 34 28 chr2 134416781 134418339 -116269515 - L1MD2 LINE L1 -518 6042 4476 4752 243 62 22 chr2 134418438 134419624 -116268230 - L1MD2 LINE L1 -2373 4167 2879 2121 120 0 17 chr2 134419624 134419925 -116267929 + AluSx SINE Alu 1 296 -16 4752 243 62 22 chr2 134419925 134420503 -116267351 - L1MD2 LINE L1 -3661 2879 2326 1596 229 79 19 chr2 134420474 134420955 -116266899 - L1M4 LINE L1 -893 5647 5138 * 195 389 61 22 chr2 134423036 134423347 -116264507 + L2 LINE L2 2170 2492 -822 1845 127 4 0 chr2 134423735 134423988 -116263866 - AluSx SINE Alu -54 258 5 330 264 45 0 chr2 134423999 134424109 -116263745 - L1M4 LINE L1 -985 5659 5545 26 98 0 0 chr2 134424112 134424194 -116263660 + AT_rich Low_complexity Low_complexity 1 82 0 2051 260 41 6 chr2 134424196 134424873 -116262981 - L1M4 LINE L1 -1107 5537 4837 4664 249 52 24 chr2 134424875 134425986 -116261868 - L1M4 LINE L1 -4731 1915 752 315 0 0 0 chr2 134425986 134426021 -116261833 + (TG)n Simple_repeat Simple_repeat 2 36 0 4664 249 52 24 chr2 134426021 134426517 -116261337 - L1M4 LINE L1 -5894 752 272 331 256 95 60 chr2 134427170 134427338 -116260516 + L2 LINE L2 3140 3313 0 23 0 0 0 chr2 134427481 134427504 -116260350 + AT_rich Low_complexity Low_complexity 1 23 0 440 293 13 33 chr2 134427776 134427926 -116259928 + MER5B DNA MER1_type 6 152 -26 2143 114 90 3 chr2 134428027 134428361 -116259493 - L1MC/D LINE L1 -547 5786 5424 1072 209 10 0 chr2 134428676 134428877 -116258977 + MER105 DNA DNA 1 203 -1 183 204 0 0 chr2 134429396 134429440 -116258414 + GA-rich Low_complexity Low_complexity 2 45 0 455 192 286 8 chr2 134429997 134430176 -116257678 - MIR SINE MIR -23 239 20 589 119 0 0 chr2 134430468 134430552 -116257302 - AluJ/FRAM SINE Alu -13 299 216 23 78 0 0 chr2 134430652 134430703 -116257151 + AT_rich Low_complexity Low_complexity 1 51 0 300 248 112 47 chr2 134431144 134431319 -116256535 + MIR SINE MIR 43 226 -27 205 234 0 0 chr2 134432142 134432189 -116255665 - L2 LINE L2 0 3272 3226 253 256 41 41 chr2 134432246 134432366 -116255488 - MIR SINE MIR -88 120 1 1133 179 11 74 chr2 134434173 134434458 -116253396 + L1MB8 LINE L1 5912 6178 0 902 200 70 20 chr2 134434652 134434852 -116253002 - MER63A DNA MER1_type 0 210 1 2831 132 4 43 chr2 134435852 134436279 -116251575 - MER65A LTR ERV1 0 445 36 2095 102 27 3 chr2 134436279 134436426 -116251428 + AluSc SINE Alu 1 143 -166 216 0 0 0 chr2 134436426 134436450 -116251404 + (CG)n Simple_repeat Simple_repeat 2 25 0 2095 102 27 3 chr2 134436450 134436596 -116251258 + AluSc SINE Alu 143 301 -8 2831 132 4 43 chr2 134436596 134436631 -116251223 - MER65A LTR ERV1 -409 36 1 235 238 0 32 chr2 134436680 134436743 -116251111 + L1ME LINE L1 5855 5915 -206 277 313 0 0 chr2 134436849 134436932 -116250922 - L1MC/D LINE L1 -1988 5820 5738 2679 174 34 4 chr2 134437000 134437472 -116250382 - MLT1D LTR MaLR 0 505 20 187 356 167 13 chr2 134437891 134438130 -116249724 - L2 LINE L2 -547 2767 2492 1190 190 134 4 chr2 134438260 134438507 -116249347 + AluJo SINE Alu 1 279 -33 880 255 34 21 chr2 134438942 134439177 -116248677 - MIR SINE MIR 0 262 25 977 258 63 78 chr2 134440814 134441414 -116246440 - MLT1G1 LTR MaLR 0 595 5 702 122 0 0 chr2 134442281 134442388 -116245466 - AluSp/q SINE Alu 0 313 207 268 245 147 37 chr2 134443114 134443277 -116244577 + MARNA DNA Mariner 14 194 -392 784 306 54 0 chr2 134443500 134443758 -116244096 - MLT1J LTR MaLR -239 272 1 406 299 113 27 chr2 134443765 134444066 -116243788 - MARNA DNA Mariner -203 383 57 559 265 176 20 chr2 134444073 134444277 -116243577 - MIR SINE MIR -11 251 16 452 268 16 16 chr2 134444277 134444404 -116243450 + HAL1 LINE L1 544 670 -1837 412 307 87 42 chr2 134445022 134445263 -116242591 - MIR SINE MIR 0 262 11 2731 90 3 6 chr2 134445407 134445772 -116242082 + THE1B LTR MaLR 1 364 0 230 234 0 0 chr2 134445781 134445828 -116242026 + MER5A DNA MER1_type 1 47 -142 343 121 52 0 chr2 134445840 134445898 -116241956 - MLT1D LTR MaLR -8 497 437 767 159 65 7 chr2 134445899 134446076 -116241778 + AluJb SINE Alu 137 321 0 1608 202 80 42 chr2 134446081 134446507 -116241347 - MLT1D LTR MaLR -63 442 1 699 223 8 0 chr2 134446507 134446637 -116241217 + MER5A DNA MER1_type 47 177 -12 225 306 163 0 chr2 134447100 134447247 -116240607 + MIR SINE MIR 14 184 -78 228 282 9 36 chr2 134448302 134448412 -116239442 - L1ME4a LINE L1 -65 6056 5950 2421 67 0 13 chr2 134448702 134449016 -116238838 + AluY SINE Alu 1 310 -1 1490 181 43 3 chr2 134449560 134449842 -116238012 - AluJb SINE Alu -19 293 1 380 55 18 0 chr2 134450973 134451028 -116236826 + (GA)n Simple_repeat Simple_repeat 1 56 0 180 261 0 0 chr2 134451599 134451664 -116236190 + CT-rich Low_complexity Low_complexity 1 65 0 207 0 0 0 chr2 134452987 134453010 -116234844 + (TCTA)n Simple_repeat Simple_repeat 2 24 0 225 261 23 34 chr2 134453031 134453119 -116234735 - L1MC4 LINE L1 -1342 6700 6614 3677 151 27 42 chr2 134453158 134453963 -116233891 + MER4D LTR ERV1 4 895 -8 4246 74 5 11 chr2 134454282 134454544 -116233310 + MER41A LTR ERV1 1 263 -291 4036 88 47 9 chr2 134454544 134455092 -116232762 - MER61E LTR ERV1 0 569 1 4246 74 5 11 chr2 134455092 134455386 -116232468 + MER41A LTR ERV1 263 554 0 360 274 26 26 chr2 134455600 134455713 -116232141 + MIR SINE MIR 61 173 -89 4748 87 11 2 chr2 134456012 134456641 -116231213 - MER41B LTR ERV1 0 635 1 1964 128 10 3 chr2 134458447 134458751 -116229103 - AluSx SINE Alu -6 306 1 2721 161 13 9 chr2 134459207 134459672 -116228182 + MLT1C LTR MaLR 1 467 0 21 0 0 0 chr2 134459968 134459989 -116227865 + AT_rich Low_complexity Low_complexity 1 21 0 556 184 217 72 chr2 134460069 134460124 -116227730 - MIR SINE MIR 0 262 216 2373 51 3 0 chr2 134460124 134460418 -116227436 - AluY SINE Alu -16 295 1 556 184 217 72 chr2 134460418 134460514 -116227340 - MIR SINE MIR -46 216 89 764 153 0 0 chr2 134460600 134460711 -116227143 + FLAM_A SINE Alu 21 131 -11 294 291 48 9 chr2 134460937 134461046 -116226808 + MIR SINE MIR 33 151 -68 429 219 342 26 chr2 134461815 134462166 -116225688 - L2 LINE L2 -19 3294 2833 569 300 72 52 chr2 134462502 134462752 -116225102 - MIR SINE MIR 0 262 8 1169 174 14 19 chr2 134463309 134463521 -116224333 - LTR32 LTR ERVL 0 471 261 255 118 0 0 chr2 134463539 134463573 -116224281 - LTR32 LTR ERVL -422 49 16 1934 124 0 3 chr2 134464959 134465250 -116222604 - AluSx SINE Alu -22 290 1 321 303 214 11 chr2 134466041 134466219 -116221635 - MIR SINE MIR -24 238 25 210 176 0 0 chr2 134467075 134467126 -116220728 + (CA)n Simple_repeat Simple_repeat 1 51 0 1348 180 138 13 chr2 134467828 134468133 -116219721 + MER2 DNA MER2_type 2 344 0 183 297 99 55 chr2 134470350 134470441 -116217413 + L2 LINE L2 3126 3220 -52 448 310 41 18 chr2 134470908 134471079 -116216775 - MER91A DNA MER1_type -8 188 14 1902 119 3 7 chr2 134471295 134471590 -116216264 - AluJb SINE Alu -6 306 13 1026 186 43 9 chr2 134472290 134472500 -116215354 - MER20 DNA MER1_type -2 217 1 381 301 42 72 chr2 134473189 134473382 -116214472 + MIR3 SINE MIR 16 202 -6 269 224 158 0 chr2 134473672 134473748 -116214106 + MIR SINE MIR 43 130 -78 2935 191 11 28 chr2 134473777 134474349 -116213505 + MER68 LTR ERV1 1 562 0 319 220 42 68 chr2 134474955 134475073 -116212781 - MLT1K LTR MaLR -121 467 353 555 16 0 0 chr2 134475354 134475418 -116212436 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 4059 175 21 7 chr2 134475418 134476139 -116211715 - MER44D DNA MER2_type -2 603 1 335 283 92 0 chr2 134477138 134477325 -116210529 - HAL1 LINE L1 -1206 1301 1106 1980 129 10 6 chr2 134477325 134477636 -116210218 - AluSx SINE Alu 0 312 1 335 283 92 0 chr2 134477636 134477663 -116210191 - HAL1 LINE L1 -1401 1106 1083 2056 121 3 0 chr2 134478163 134478468 -116209386 - AluSq SINE Alu -7 306 1 327 308 56 15 chr2 134478989 134479184 -116208670 - L1ME LINE L1 -302 5819 5617 1856 124 11 4 chr2 134479306 134479580 -116208274 - AluSg SINE Alu -20 290 15 2410 248 99 57 chr2 134479785 134480255 -116207599 - L1ME3A LINE L1 -13 6157 5708 2209 90 0 7 chr2 134480255 134480555 -116207299 - AluSx SINE Alu -14 298 1 2410 248 99 57 chr2 134480555 134480621 -116207233 - L1ME3A LINE L1 -462 5708 5646 1936 142 7 0 chr2 134480621 134480923 -116206931 - AluSx SINE Alu -8 304 1 2410 248 99 57 chr2 134480923 134481833 -116206021 - L1ME3A LINE L1 -524 5646 4618 1958 81 22 7 chr2 134481833 134482106 -116205748 - AluSx SINE Alu -35 277 1 2410 248 99 57 chr2 134482106 134482475 -116205379 - L1ME3A LINE L1 -1552 4618 4266 187 298 77 58 chr2 134483524 134483628 -116204226 - L2 LINE L2 -2 3270 3165 397 208 0 13 chr2 134483976 134484053 -116203801 + L2 LINE L2 3237 3312 -1 772 61 0 10 chr2 134484264 134484363 -116203491 + AluY SINE Alu 35 132 -179 1976 107 0 28 chr2 134484367 134484685 -116203169 + AluY SINE Alu 1 309 -2 699 255 151 58 chr2 134485507 134485919 -116201935 - L2 LINE L2 -35 3278 2829 232 247 147 74 chr2 134486613 134486803 -116201051 - MER102a DNA MER1_type -8 322 119 3109 128 123 49 chr2 134487927 134488538 -116199316 + MER4A LTR ERV1 9 664 0 289 245 21 32 chr2 134488540 134488634 -116199220 - L1ME4a LINE L1 -70 6051 5959 540 295 111 5 chr2 134488683 134488890 -116198964 + L2 LINE L2 2838 3066 -247 1670 161 0 4 chr2 134489054 134489333 -116198521 - AluJo SINE Alu -26 286 9 276 299 92 29 chr2 134489381 134489555 -116198299 - L1ME4a LINE L1 -319 5802 5618 1034 276 71 18 chr2 134489562 134489943 -116197911 - MLT1K LTR MaLR 0 588 188 22 0 0 0 chr2 134490131 134490153 -116197701 + AT_rich Low_complexity Low_complexity 1 22 0 2191 88 7 10 chr2 134491430 134491736 -116196118 - AluSc SINE Alu -4 305 1 2187 109 7 0 chr2 134492919 134493222 -116194632 + AluSx SINE Alu 1 305 -7 386 159 11 0 chr2 134494585 134494673 -116193181 + (CA)n Simple_repeat Simple_repeat 1 89 0 280 324 39 0 chr2 134495895 134495997 -116191857 + MIR SINE MIR 78 183 -79 246 32 0 0 chr2 134495999 134496030 -116191824 + (CA)n Simple_repeat Simple_repeat 2 32 0 203 188 0 62 chr2 134496055 134496119 -116191735 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 1857 139 14 0 chr2 134496235 134496523 -116191331 + AluSx SINE Alu 1 292 -20 2366 118 31 3 chr2 134496907 134497256 -116190598 + MER46B DNA MER2_type 3 236 0 916 154 157 31 chr2 134497444 134497730 -116190124 + MER33 DNA MER1_type 1 322 -2 1999 147 19 19 chr2 134498667 134499041 -116188813 - L1MB2 LINE L1 0 6171 5798 1163 138 0 0 chr2 134499041 134499215 -116188639 - AluSg/x SINE Alu -5 307 134 1999 116 3 7 chr2 134499215 134499518 -116188336 - AluSx SINE Alu -10 302 1 1718 112 70 0 chr2 134499520 134499779 -116188075 - L1MB2 LINE L1 -358 5813 5537 801 290 190 34 chr2 134499828 134500566 -116187288 - L2 LINE L2 -2159 1155 303 270 336 35 7 chr2 134500672 134500815 -116187039 + L1MC4a LINE L1 5789 5935 -1873 805 201 64 54 chr2 134500936 134501064 -116186790 + MER3 DNA MER1_type 1 134 -75 2053 98 0 14 chr2 134501064 134501370 -116186484 - AluSx SINE Alu 0 302 1 805 201 64 54 chr2 134501370 134501444 -116186410 + MER3 DNA MER1_type 134 206 -3 1795 198 49 10 chr2 134502751 134503156 -116184698 + MLT1C LTR MaLR 1 421 -46 881 105 0 16 chr2 134503154 134503278 -116184576 - Charlie3 DNA MER1_type -4 2706 2585 * 785 131 0 0 chr2 134503278 134503385 -116184469 - Charlie3 DNA MER1_type -2504 206 100 266 245 0 0 chr2 134503422 134503475 -116184379 + MLT1C LTR MaLR 412 464 -3 322 368 7 15 chr2 134503498 134503634 -116184220 + MIR SINE MIR 54 188 -74 621 284 146 34 chr2 134503940 134504063 -116183791 - L1ME4a LINE L1 -17 6104 5996 366 80 0 0 chr2 134504063 134504113 -116183741 + (TG)n Simple_repeat Simple_repeat 2 51 0 621 284 146 34 chr2 134504113 134504655 -116183199 - L1ME4a LINE L1 -125 5996 5352 346 280 77 49 chr2 134504873 134505016 -116182838 + L2 LINE L2 3124 3270 -2 239 269 0 0 chr2 134505077 134505129 -116182725 - L2 LINE L2 -12 3260 3209 244 348 36 27 chr2 134505159 134505271 -116182583 - MIR SINE MIR -149 113 1 340 294 59 10 chr2 134506723 134506825 -116181029 + MIR SINE MIR 156 262 0 2133 184 22 74 chr2 134506859 134507451 -116180403 - L1MB8 LINE L1 0 6178 5618 1844 168 69 3 chr2 134507451 134507784 -116180070 - MLT1A1 LTR MaLR -10 355 1 1224 161 24 0 chr2 134507784 134507989 -116179865 - L1MB8 LINE L1 -552 5626 5417 1577 186 59 34 chr2 134508260 134508614 -116179240 + MLT1A2 LTR MaLR 1 363 -11 416 341 9 50 chr2 134509160 134509380 -116178474 - MIR SINE MIR -25 237 27 1973 134 16 0 chr2 134509854 134510159 -116177695 + AluSx SINE Alu 1 310 -2 684 147 168 1 chr2 134510212 134510365 -116177489 - L1MB1 LINE L1 -21 6147 5972 2044 109 0 7 chr2 134511093 134511407 -116176447 - AluSx SINE Alu 0 312 1 303 306 145 19 chr2 134511832 134512209 -116175645 - L2 LINE L2 -168 3145 2705 403 274 98 41 chr2 134512537 134512803 -116175051 - L1ME4a LINE L1 -191 5930 5650 4039 176 69 30 chr2 134513804 134514635 -116173219 + MER21B LTR ERV1 1 863 0 1642 166 0 17 chr2 134515300 134515589 -116172265 + AluJb SINE Alu 1 284 -28 541 254 163 49 chr2 134516052 134516101 -116171753 - L1ME4a LINE L1 -5 6116 6074 1659 142 3 55 chr2 134516101 134516410 -116171444 - AluSx SINE Alu -19 293 1 541 254 163 49 chr2 134516410 134516530 -116171324 - L1ME4a LINE L1 -47 6074 5969 1862 138 14 10 chr2 134516530 134516827 -116171027 - AluSx SINE Alu -14 298 1 541 254 163 49 chr2 134516827 134517183 -116170671 - L1ME4a LINE L1 -152 5969 5530 597 361 77 4 chr2 134517274 134517534 -116170320 - L3 LINE CR1 -976 601 323 188 152 30 0 chr2 134518079 134518112 -116169742 + L2 LINE L2 3020 3053 -260 206 206 0 0 chr2 134518520 134518554 -116169300 + polypyrimidine Low_complexity Low_complexity 3 36 0 261 319 0 0 chr2 134518568 134518637 -116169217 + (CATG)n Simple_repeat Simple_repeat 2 70 0 744 202 33 6 chr2 134520510 134520693 -116167161 - MER5A DNA MER1_type 0 189 2 264 254 0 28 chr2 134520711 134520774 -116167080 + MER5B DNA MER1_type 1 63 -115 5516 71 16 6 chr2 134520774 134521502 -116166352 + L1PA10 LINE L1 5423 6158 -10 338 286 105 0 chr2 134521566 134521671 -116166183 + MER5B DNA MER1_type 63 178 0 329 238 138 0 chr2 134521735 134521815 -116166039 - MER5A DNA MER1_type -86 103 13 945 189 86 0 chr2 134521848 134522023 -116165831 - MER20 DNA MER1_type 0 219 30 246 240 77 58 chr2 134523687 134523791 -116164063 - MER5B DNA MER1_type -5 173 68 1034 173 65 42 chr2 134524327 134524541 -116163313 - MER20 DNA MER1_type 0 219 1 2017 123 0 3 chr2 134524579 134524872 -116162982 + AluSc SINE Alu 1 292 -17 330 298 22 67 chr2 134524872 134525050 -116162804 + MER5B DNA MER1_type 6 175 -3 309 283 209 23 chr2 134525317 134525494 -116162360 - MIR SINE MIR -32 230 21 988 140 6 0 chr2 134525966 134526130 -116161724 - AluSg/x SINE Alu -10 302 138 2226 72 0 13 chr2 134526134 134526438 -116161416 - AluY SINE Alu -3 308 9 191 295 49 0 chr2 134528159 134528220 -116159634 - MIR3 SINE MIR -34 174 111 378 289 39 19 chr2 134529071 134529175 -116158679 - L1MC4 LINE L1 -1348 6694 6589 354 266 0 43 chr2 134529204 134529298 -116158556 + L1MC4 LINE L1 6614 6703 -1339 2028 136 0 0 chr2 134529301 134529596 -116158258 - AluSx SINE Alu -17 295 1 201 322 11 35 chr2 134529665 134529752 -116158102 - MIR SINE MIR -70 192 108 339 254 193 10 chr2 134530178 134530375 -116157479 - L1ME4a LINE L1 -287 5834 5602 384 311 132 24 chr2 134530844 134531133 -116156721 - MLT1I LTR MaLR -26 383 64 548 139 105 111 chr2 134531403 134531575 -116156279 - MER30 DNA MER1_type -59 171 1 569 249 106 28 chr2 134531663 134532003 -116155851 + MLT1G1 LTR MaLR 1 329 -226 862 221 99 137 chr2 134532497 134533171 -116154683 + L2 LINE L2 2215 2863 -451 218 179 119 30 chr2 134533219 134533286 -116154568 + L2 LINE L2 3200 3272 0 242 291 34 43 chr2 134533286 134533403 -116154451 + L2 LINE L2 2927 3042 -230 1926 139 0 3 chr2 134533409 134533697 -116154157 - AluSx SINE Alu -23 289 3 751 259 184 18 chr2 134534268 134534860 -116152994 + L2 LINE L2 2563 3263 -50 294 345 95 31 chr2 134535157 134535516 -116152338 + L2 LINE L2 2378 2759 -555 229 237 8 76 chr2 134535525 134535643 -116152211 + MER113 DNA MER1_type? 5 114 -407 707 216 150 0 chr2 134536572 134536739 -116151115 - MER3 DNA MER1_type 0 209 18 303 49 0 0 chr2 134537978 134538019 -116149835 + (TG)n Simple_repeat Simple_repeat 1 41 0 1599 151 37 4 chr2 134538019 134538291 -116149563 - AluJo SINE Alu -31 281 1 1188 147 5 16 chr2 134538295 134538486 -116149368 - MER5A DNA MER1_type 0 189 1 1984 113 3 0 chr2 134538496 134538820 -116149034 - AluSp SINE Alu 0 325 1 215 308 98 53 chr2 134539217 134539350 -116148504 + MIR3 SINE MIR 2 140 -68 430 253 43 118 chr2 134540497 134540683 -116147171 - MER5B DNA MER1_type -6 172 1 337 223 107 19 chr2 134542389 134542492 -116145362 - MIR SINE MIR -91 171 60 200 182 0 0 chr2 134543803 134543836 -116144018 + (TG)n Simple_repeat Simple_repeat 2 34 0 2890 123 37 62 chr2 134544736 134545297 -116142557 - L1MA5A LINE L1 -2 6295 5749 328 281 137 36 chr2 134545655 134545904 -116141950 - MER102b DNA MER1_type -1 340 67 26 30 0 0 chr2 134546674 134546707 -116141147 + AT_rich Low_complexity Low_complexity 1 33 0 286 296 23 0 chr2 134546870 134546958 -116140896 - MIR SINE MIR -77 131 42 1742 69 138 40 chr2 134547243 134547519 -116140335 + AluSx SINE Alu 1 303 -9 316 347 50 0 chr2 134547683 134547804 -116140050 + MIR SINE MIR 65 191 -71 346 270 62 60 chr2 134548077 134548259 -116139595 + MIR SINE MIR 40 220 -42 212 226 0 38 chr2 134549019 134549072 -116138782 + GA-rich Low_complexity Low_complexity 2 52 0 2312 84 0 0 chr2 134549512 134549809 -116138045 + AluSx SINE Alu 1 297 -15 1573 187 139 16 chr2 134549837 134550260 -116137594 - LTR54B LTR ERV1 -22 476 2 353 279 81 0 chr2 134551099 134551210 -116136644 + MIR SINE MIR 99 218 -44 2520 222 75 28 chr2 134551913 134552202 -116135652 + L1ME1 LINE L1 4810 5084 -1082 2251 104 7 0 chr2 134552202 134552511 -116135343 + AluSx SINE Alu 1 311 -1 2520 222 75 28 chr2 134552511 134553439 -116134415 + L1ME1 LINE L1 5084 6077 -89 393 310 145 0 chr2 134555735 134555880 -116131974 + L2 LINE L2 3107 3272 0 1977 120 3 20 chr2 134556283 134556582 -116131272 - AluSc SINE Alu -15 294 1 574 257 132 49 chr2 134556643 134557134 -116130720 - L1ME LINE L1 -366 5798 5254 1372 189 59 181 chr2 134557147 134557739 -116130115 - MLT2B3 LTR ERVL 0 554 1 336 287 61 39 chr2 134557922 134558103 -116129751 - L1ME LINE L1 -1053 5093 4909 534 306 120 50 chr2 134558135 134558869 -116128985 - L1ME LINE L1 -1303 4843 4010 463 297 100 0 chr2 134558885 134559124 -116128730 - L1ME LINE L1 -2203 3943 3681 467 286 81 72 chr2 134559239 134559585 -116128269 - L1ME LINE L1 -2698 3448 3100 1166 221 15 70 chr2 134560156 134560440 -116127414 + MLT2C1 LTR ERVL 85 350 -47 2258 151 17 0 chr2 134560440 134560797 -116127057 + MER47A DNA MER2_type 4 366 0 1166 221 15 70 chr2 134560797 134560842 -116127012 + MLT2C1 LTR ERVL 350 396 -1 732 264 221 8 chr2 134560877 134561252 -116126602 - HAL1 LINE L1 0 2507 2053 1024 164 44 16 chr2 134561293 134561476 -116126378 - AluJo SINE Alu -124 188 1 645 175 83 75 chr2 134561476 134561704 -116126150 - HAL1 LINE L1 -971 1536 1307 1830 114 24 14 chr2 134561722 134562011 -116125843 - AluSx SINE Alu -20 292 1 199 222 40 151 chr2 134562136 134562262 -116125592 + MIR SINE MIR 17 128 -134 2364 133 28 17 chr2 134564238 134564598 -116123256 - THE1B LTR MaLR 0 364 1 1043 218 78 36 chr2 134564695 134565026 -116122828 + L1ME2 LINE L1 5820 6164 0 615 197 95 0 chr2 134565272 134565419 -116122435 + MER3 DNA MER1_type 1 161 -48 816 215 185 0 chr2 134565435 134565700 -116122154 - L2 LINE L2 -174 3139 2826 299 299 72 72 chr2 134566083 134566250 -116121604 + MIR3 SINE MIR 39 205 -3 1357 185 4 21 chr2 134566657 134566900 -116120954 - MLT1A1 LTR MaLR 0 365 127 3615 175 92 6 chr2 134566920 134567612 -116120242 - MSTB-int LTR MaLR -865 786 35 2312 153 28 13 chr2 134567613 134568006 -116119848 - MSTB LTR MaLR -27 399 1 197 444 57 0 chr2 134568537 134568661 -116119193 + L2 LINE L2 3107 3237 -35 234 318 12 12 chr2 134568852 134568937 -116118917 - L2 LINE L2 -190 3082 2998 7290 216 73 43 chr2 134569392 134572313 -116115541 - L1ME1 LINE L1 -4 6162 3121 2120 118 3 0 chr2 134572313 134572619 -116115235 - AluSp SINE Alu -6 307 1 7290 216 73 43 chr2 134572619 134573204 -116114650 - L1ME1 LINE L1 -3045 3121 2555 895 233 163 20 chr2 134573208 134573607 -116114247 - L1MC/D LINE L1 -2098 5710 5255 273 273 80 0 chr2 134574006 134574094 -116113760 + MIR SINE MIR 48 142 -120 1562 172 41 80 chr2 134574281 134574670 -116113184 - MLT1A2 LTR MaLR 0 374 1 1752 170 0 0 chr2 134574695 134574983 -116112871 - AluJo SINE Alu -24 288 1 2452 60 0 0 chr2 134575499 134575797 -116112057 - AluY SINE Alu -13 298 1 852 275 93 16 chr2 134575816 134576202 -116111652 - MLT2F LTR ERVL -10 653 238 392 259 38 30 chr2 134576273 134576404 -116111450 - MLT2F LTR ERVL -528 135 4 347 271 21 10 chr2 134576405 134576501 -116111353 - MIR SINE MIR -96 166 70 2080 166 14 3 chr2 134577388 134577749 -116110105 - MLT1A1 LTR MaLR 0 365 1 2769 210 36 2 chr2 134577962 134578543 -116109311 - L1MD3 LINE L1 -2 7993 7393 526 127 0 127 chr2 134578544 134578670 -116109184 - MLT1F1 LTR MaLR -456 111 2 305 300 36 55 chr2 134580556 134580666 -116107188 + L1MC4 LINE L1 6611 6718 -1324 924 106 0 23 chr2 134580669 134580801 -116107053 - FLAM_C SINE Alu -2 131 3 344 312 52 39 chr2 134581419 134581573 -116106281 + MER5A DNA MER1_type 24 179 -10 275 253 101 20 chr2 134585340 134585439 -116102415 - L2 LINE L2 -24 3289 3183 230 306 69 0 chr2 134587149 134587221 -116100633 + MIR SINE MIR 81 157 -105 388 276 259 4 chr2 134587317 134587549 -116100305 - L2 LINE L2 -14 3299 3009 1530 236 122 12 chr2 134588423 134589025 -116098829 + L1MB7 LINE L1 5460 6171 0 307 149 21 0 chr2 134592778 134592825 -116095029 - L2 LINE L2 -16 3256 3209 25 31 0 0 chr2 134593092 134593124 -116094730 + AT_rich Low_complexity Low_complexity 1 32 0 444 51 0 0 chr2 134595037 134595096 -116092758 + (CA)n Simple_repeat Simple_repeat 1 59 0 430 300 0 33 chr2 134597375 134597594 -116090260 + L1MC4a LINE L1 5626 5829 -302 499 297 90 9 chr2 134598272 134598494 -116089360 + MIR SINE MIR 18 262 0 211 262 19 9 chr2 134598715 134598822 -116089032 + (TATATG)n Simple_repeat Simple_repeat 5 112 0 236 166 47 48 chr2 134601729 134601806 -116086048 - MIR SINE MIR -36 172 94 1935 127 0 7 chr2 134602380 134602694 -116085160 + AluSx SINE Alu 1 312 0 205 329 56 28 chr2 134604267 134604410 -116083444 + MIR SINE MIR 79 225 -37 4647 164 34 20 chr2 134604737 134605590 -116082264 - MER6 DNA MER2_type 0 865 1 2083 112 0 0 chr2 134606170 134606457 -116081397 - AluSx SINE Alu -25 287 1 463 270 13 33 chr2 134606516 134606668 -116081186 + MIR SINE MIR 29 177 -85 1462 161 139 0 chr2 134607519 134607835 -116080019 - MER46B DNA MER2_type -1 235 1 1896 136 3 0 chr2 134607841 134608128 -116079726 - AluSx SINE Alu -14 298 11 1987 117 3 7 chr2 134608582 134608881 -116078973 + AluSx SINE Alu 1 298 -14 193 233 23 0 chr2 134609080 134609123 -116078731 + L2 LINE L2 3213 3256 -16 237 283 122 47 chr2 134609574 134609752 -116078102 + MIR SINE MIR 13 192 -62 621 336 171 1 chr2 134610297 134610841 -116077013 - L2 LINE L2 -88 3225 2582 252 270 84 132 chr2 134610910 134611206 -116076648 - L2 LINE L2 -2 3270 2989 195 260 40 0 chr2 134612143 134612193 -116075661 + L2 LINE L2 3262 3313 0 481 281 78 39 chr2 134612422 134612703 -116075151 + L1PB1 LINE L1 5589 5880 -271 * 844 218 83 36 chr2 134612457 134612960 -116074894 + L1MD3 LINE L1 5630 6178 0 794 214 64 14 chr2 134613013 134613233 -116074621 - MIR SINE MIR -20 242 12 196 303 30 30 chr2 134614142 134614208 -116073646 + L3 LINE CR1 456 521 -1056 183 80 0 0 chr2 134615328 134615353 -116072501 + (TTCC)n Simple_repeat Simple_repeat 2 26 0 196 300 138 0 chr2 134615374 134615454 -116072400 - L2 LINE L2 -21 3251 3161 189 264 79 90 chr2 134615558 134615736 -116072118 + L3b LINE CR1 1224 1399 -184 267 287 87 9 chr2 134615945 134616060 -116071794 + MIR SINE MIR 111 234 -28 1146 191 26 26 chr2 134616234 134616464 -116071390 - MIR SINE MIR -12 250 21 566 266 53 26 chr2 134617633 134617846 -116070008 + MIR SINE MIR 46 262 0 337 284 60 0 chr2 134617848 134617964 -116069890 + L2 LINE L2 3191 3313 0 312 127 0 0 chr2 134619611 134619666 -116068188 + (GGAA)n Simple_repeat Simple_repeat 3 57 0 199 315 0 99 chr2 134620214 134620325 -116067529 + MIR3 SINE MIR 1 100 -108 242 118 39 0 chr2 134620496 134620547 -116067307 + A-rich Low_complexity Low_complexity 3 55 0 501 214 63 19 chr2 134620606 134620765 -116067089 - L1MDa LINE L1 -4710 1830 1665 1489 213 110 19 chr2 134620822 134621250 -116066604 + MLT1C LTR MaLR 1 467 0 264 285 65 86 chr2 134621630 134621816 -116066038 + L2 LINE L2 2877 3058 -214 335 286 233 16 chr2 134622010 134622199 -116065655 - MIR SINE MIR 0 262 33 1264 196 74 39 chr2 134623699 134623984 -116063870 - AluJo SINE Alu -5 297 3 565 319 27 5 chr2 134624070 134624255 -116063599 + MER20B DNA MER1_type 34 222 -561 1974 143 7 3 chr2 134624269 134624569 -116063285 - AluSx SINE Alu -11 301 1 754 292 9 9 chr2 134624577 134624810 -116063044 + MER20B DNA MER1_type 288 520 -263 470 202 47 8 chr2 134624996 134625125 -116062729 + MER20B DNA MER1_type 576 709 -74 186 274 48 24 chr2 134625663 134625747 -116062107 - MIR SINE MIR -130 132 47 423 0 0 0 chr2 134626382 134626429 -116061425 + (CA)n Simple_repeat Simple_repeat 2 48 0 359 194 0 0 chr2 134627961 134628023 -116059831 + L1MD3 LINE L1 7123 7184 -811 2473 196 82 7 chr2 134628099 134628703 -116059151 + L1MD3 LINE L1 7159 7984 0 785 176 69 48 chr2 134628707 134628925 -116058929 + L1MB4 LINE L1 5622 5822 -358 824 132 7 29 chr2 134628967 134629103 -116058751 + FLAM_C SINE Alu 1 133 0 1320 193 49 18 chr2 134629112 134629397 -116058457 + AluJo SINE Alu 1 294 -18 2101 133 11 41 chr2 134629399 134629768 -116058086 + L1MB4 LINE L1 5816 6173 -7 4766 177 45 26 chr2 134629892 134631374 -116056480 + L1MA9 LINE L1 4771 6287 -25 614 247 102 58 chr2 134632097 134632372 -116055482 + MARNA DNA Mariner 162 448 -138 250 250 105 65 chr2 134632629 134632753 -116055101 + MIR3 SINE MIR 6 134 -74 234 353 43 58 chr2 134636374 134636513 -116051341 + MIR SINE MIR 2 138 -124 574 298 6 6 chr2 134636519 134636690 -116051164 + MIR SINE MIR 77 247 -15 328 212 59 51 chr2 134637767 134637885 -116049969 + MIR SINE MIR 117 235 -27 215 364 54 39 chr2 134638161 134638290 -116049564 + L2 LINE L2 3182 3312 -1 310 232 152 20 chr2 134638831 134638930 -116048924 - L2 LINE L2 -1 3312 3201 1317 206 14 41 chr2 134638974 134639266 -116048588 - AluJb SINE Alu -23 289 6 340 234 62 86 chr2 134641389 134641517 -116046337 + MIR SINE MIR 88 212 -50 273 279 89 0 chr2 134641699 134641778 -116046076 + L2 LINE L2 3186 3271 -1 271 336 15 15 chr2 134642412 134642543 -116045311 + L2 LINE L2 3183 3313 0 1164 206 80 32 chr2 134644991 134645236 -116042618 - MER58B DNA MER1_type -2094 326 61 2008 63 100 4 chr2 134645236 134645506 -116042348 + AluY SINE Alu 1 296 -15 1164 206 80 32 chr2 134645506 134645571 -116042283 - MER58B DNA MER1_type -2359 61 1 288 220 22 33 chr2 134647259 134647350 -116040504 + GA-rich Low_complexity Low_complexity 5 94 0 3530 143 47 3 chr2 134649154 134649768 -116038086 - L1MA4A LINE L1 -6 6297 5657 805 150 7 33 chr2 134650146 134650299 -116037555 + MER46A DNA MER2_type 88 236 0 26 74 0 0 chr2 134653727 134653781 -116034073 + AT_rich Low_complexity Low_complexity 1 54 0 278 282 120 0 chr2 134655136 134655255 -116032599 + MIR SINE MIR 37 167 -58 230 333 20 10 chr2 134656365 134656467 -116031387 + MIR SINE MIR 19 121 -87 1625 189 37 37 chr2 134656629 134656984 -116030870 + MLT1A1 LTR MaLR 1 355 -10 1091 0 25 0 chr2 134657866 134658018 -116029836 + L1PA5 LINE L1 6014 6168 0 1632 187 141 90 chr2 134659128 134659291 -116028563 + L1MC5 LINE L1 7157 7310 -651 1972 112 3 31 chr2 134659291 134659577 -116028277 + AluSx SINE Alu 1 278 -34 1632 187 141 90 chr2 134659577 134660150 -116027704 + L1MC5 LINE L1 7310 7931 -30 346 296 81 54 chr2 134660775 134660961 -116026893 - MIR SINE MIR -24 238 48 180 0 0 0 chr2 134661007 134661027 -116026827 + (A)n Simple_repeat Simple_repeat 1 20 0 263 27 0 27 chr2 134661029 134661066 -116026788 + (TA)n Simple_repeat Simple_repeat 1 36 0 2235 109 6 6 chr2 134661069 134661382 -116026472 - AluSp SINE Alu 0 313 1 367 253 92 89 chr2 134661714 134661995 -116025859 + MLT1J LTR MaLR 230 511 0 201 346 141 13 chr2 134663102 134663258 -116024596 + MER5A DNA MER1_type 13 188 -1 356 231 192 0 chr2 134663323 134663427 -116024427 - MER5B DNA MER1_type 0 178 55 878 189 19 6 chr2 134663428 134663587 -116024267 - FRAM SINE Alu -15 161 1 192 233 17 33 chr2 134663590 134663650 -116024204 - MER5B DNA MER1_type -116 62 4 264 98 38 0 chr2 134664056 134664070 -116023784 - FLAM_A SINE Alu -182 120 108 192 77 0 0 chr2 134664070 134664096 -116023758 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 264 98 38 0 chr2 134664096 134664137 -116023717 - FLAM_A SINE Alu -194 108 85 445 69 0 28 chr2 134664137 134664209 -116023645 + (TCTG)n Simple_repeat Simple_repeat 2 71 0 189 0 0 0 chr2 134664215 134664236 -116023618 + (CCTA)n Simple_repeat Simple_repeat 3 23 0 780 0 0 29 chr2 134664262 134664365 -116023489 + (TCTA)n Simple_repeat Simple_repeat 4 103 0 627 233 12 49 chr2 134664365 134664528 -116023326 - FAM SINE Alu -18 157 1 271 328 107 8 chr2 134665117 134665239 -116022615 - MIR3 SINE MIR -71 137 4 229 252 178 44 chr2 134665368 134665503 -116022351 - MIR SINE MIR -1 261 109 480 259 81 32 chr2 134665600 134665785 -116022069 - MIR SINE MIR -10 252 59 197 290 100 20 chr2 134665963 134666063 -116021791 - L2 LINE L2 -15 3257 3150 529 295 18 40 chr2 134666721 134666780 -116021074 - MIR SINE MIR -26 236 177 2233 121 0 0 chr2 134666780 134667078 -116020776 + AluSx SINE Alu 1 298 -14 529 295 18 40 chr2 134667078 134667258 -116020596 - MIR SINE MIR -85 177 7 649 243 46 0 chr2 134667484 134667657 -116020197 - LTR41 LTR ERVL -592 181 1 242 269 146 58 chr2 134668225 134668519 -116019335 + MLT1J LTR MaLR 110 429 -82 181 260 26 0 chr2 134669343 134669420 -116018434 + GA-rich Low_complexity Low_complexity 2 80 0 304 221 39 0 chr2 134670459 134670536 -116017318 + MIR SINE MIR 103 182 -80 1695 153 0 0 chr2 134670735 134670983 -116016871 - AluJb SINE Alu -62 250 3 249 320 80 7 chr2 134673585 134673735 -116014119 - MER5A DNA MER1_type -6 172 12 218 269 37 37 chr2 134674445 134674553 -116013301 - MIR SINE MIR -72 136 29 270 0 0 0 chr2 134675937 134675967 -116011887 + (CA)n Simple_repeat Simple_repeat 1 30 0 277 216 182 74 chr2 134676013 134676189 -116011665 - L1ME1 LINE L1 -161 6005 5811 226 211 250 19 chr2 134676193 134676297 -116011557 - MIR SINE MIR -55 153 26 399 299 153 15 chr2 134676537 134676674 -116011180 - L2 LINE L2 0 3272 3117 420 302 7 29 chr2 134676986 134677125 -116010729 - L2 LINE L2 -546 2768 2633 229 331 58 0 chr2 134677611 134677732 -116010122 + MIR3 SINE MIR 36 163 -45 932 248 47 5 chr2 134678107 134678321 -116009533 - MER58A DNA MER1_type 0 224 2 297 258 67 0 chr2 134678500 134678589 -116009265 - MIR SINE MIR -154 108 14 241 231 299 17 chr2 134678926 134679043 -116008811 + MER5A DNA MER1_type 9 158 -31 733 199 104 71 chr2 134681260 134681471 -116006383 - MER20 DNA MER1_type -1 218 1 21 0 0 0 chr2 134684400 134684421 -116003433 + AT_rich Low_complexity Low_complexity 1 21 0 325 283 165 28 chr2 134685443 134685655 -116002199 - MIR SINE MIR -18 244 4 984 321 78 7 chr2 134687821 134688267 -115999587 - L2 LINE L2 -1 3312 2835 203 0 37 0 chr2 134688895 134688922 -115998932 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 677 291 42 19 chr2 134691203 134691468 -115996386 - L1MC5 LINE L1 -728 7233 6963 1518 275 92 51 chr2 134691608 134691750 -115996104 - L1MC4a LINE L1 -1482 6326 6191 2776 168 46 0 chr2 134691750 134692250 -115995604 - L1MB2 LINE L1 -3 6168 5646 1518 275 92 51 chr2 134692250 134693076 -115994778 - L1MC4a LINE L1 -1617 6191 5316 338 287 11 11 chr2 134695423 134695517 -115992337 + L2 LINE L2 3200 3293 -20 1112 251 60 3 chr2 134695778 134696077 -115991777 + MER58B DNA MER1_type 26 341 0 934 144 42 0 chr2 134697165 134697332 -115990522 + MER2 DNA MER2_type 1 174 -171 754 241 106 25 chr2 134698974 134699369 -115988485 + MER113 DNA MER1_type? 95 521 0 344 314 24 24 chr2 134700240 134700364 -115987490 + MIR SINE MIR 11 134 -128 1024 233 9 5 chr2 134701016 134701239 -115986615 - MER58A DNA MER1_type 0 224 1 275 282 30 148 chr2 134701253 134701455 -115986399 + MER5B DNA MER1_type 1 178 0 1106 168 20 0 chr2 134701535 134701738 -115986116 + MER6B DNA MER2_type 4 210 0 200 298 0 0 chr2 134701844 134701891 -115985963 + (TTCA)n Simple_repeat Simple_repeat 2 48 0 349 258 42 17 chr2 134701891 134702011 -115985843 - L2 LINE L2 0 3313 3191 1436 138 129 8 chr2 134702224 134702464 -115985390 - AluSg1 SINE Alu -12 297 29 636 279 60 26 chr2 134703735 134704118 -115983736 - L1MC5 LINE L1 -48 7913 7518 1600 223 19 84 chr2 134704153 134704880 -115982974 - L1MC5 LINE L1 -725 7236 6542 317 296 127 72 chr2 134704914 134705346 -115982508 - L1MC4a LINE L1 -1300 6508 6053 563 148 83 0 chr2 134705362 134705470 -115982384 - L1MB3 LINE L1 0 6183 6067 207 204 0 0 chr2 134705538 134705582 -115982272 + (TA)n Simple_repeat Simple_repeat 2 45 0 319 263 42 0 chr2 134705603 134705698 -115982156 - L1MC4a LINE L1 -1903 5905 5807 1709 180 7 11 chr2 134707483 134707767 -115980087 - AluJo SINE Alu -27 285 3 881 208 21 10 chr2 134707819 134708011 -115979843 + MER58A DNA MER1_type 1 194 -30 249 269 0 26 chr2 134708786 134708864 -115978990 + MIR SINE MIR 187 262 0 23 0 0 0 chr2 134710442 134710465 -115977389 + AT_rich Low_complexity Low_complexity 1 23 0 7987 29 4 22 chr2 134711367 134713123 -115974731 - L1PA3 LINE L1 -2 6153 4415 241 207 98 0 chr2 134714221 134714303 -115973551 + L1ME4a LINE L1 6005 6094 -27 275 0 0 28 chr2 134714378 134714414 -115973440 + (CA)n Simple_repeat Simple_repeat 2 36 0 241 207 98 0 chr2 134715296 134715378 -115972476 + L1ME4a LINE L1 6005 6094 -27 275 0 0 28 chr2 134715453 134715489 -115972365 + (CA)n Simple_repeat Simple_repeat 2 36 0 239 276 143 38 chr2 134715698 134715803 -115972051 + MIR SINE MIR 20 135 -73 280 293 78 9 chr2 134716287 134716403 -115971451 - MIR SINE MIR -27 235 112 1001 287 112 49 chr2 134716631 134716886 -115970968 + L2 LINE L2 2641 2879 -434 649 231 21 5 chr2 134716886 134717072 -115970782 + MER53 DNA DNA 1 189 0 1001 287 112 49 chr2 134717072 134717433 -115970421 + L2 LINE L2 2879 3313 0 1977 192 8 5 chr2 134718307 134718687 -115969167 + Tigger7 DNA MER2_type 1 381 -352 520 194 31 0 chr2 134718698 134718796 -115969058 + Tigger7 DNA MER2_type 2391 2491 0 463 300 87 46 chr2 134719097 134719420 -115968434 + L2 LINE L2 2926 3261 -52 1550 228 120 100 chr2 134719426 134720658 -115967196 + L1MC5 LINE L1 6669 7925 -36 428 209 12 0 chr2 134722580 134722666 -115965188 + MER2 DNA MER2_type 8 94 -251 716 128 57 7 chr2 134723530 134723671 -115964183 + L1MA8 LINE L1 6140 6287 -4 228 295 152 9 chr2 134723911 134724023 -115963831 - MIR SINE MIR -101 161 34 265 184 118 13 chr2 134725762 134725838 -115962016 + MER21B LTR ERV1 408 491 -372 940 208 30 0 chr2 134726702 134726899 -115960955 + L1MB3 LINE L1 5478 5680 -491 903 163 28 17 chr2 134726899 134727074 -115960780 + L1MB3 LINE L1 6004 6183 0 742 126 39 0 chr2 134729211 134729338 -115958516 - L1MA5A LINE L1 -123 6174 6043 655 134 37 37 chr2 134729338 134729468 -115958386 + L1MA5A LINE L1 6163 6296 -1 354 335 10 56 chr2 134729474 134729671 -115958183 - L2 LINE L2 -107 3165 2978 205 271 43 0 chr2 134730254 134730335 -115957519 + MIR SINE MIR 97 188 -20 925 197 6 0 chr2 134730985 134731163 -115956691 - MER58A DNA MER1_type -1 223 45 397 226 0 0 chr2 134732192 134732276 -115955578 + L1PA16 LINE L1 6037 6120 -46 495 0 0 0 chr2 134732945 134733000 -115954854 + (TG)n Simple_repeat Simple_repeat 2 56 0 1847 163 54 0 chr2 134733775 134734070 -115953784 - AluSx SINE Alu -1 311 1 344 313 0 9 chr2 134735552 134735667 -115952187 - MIR3 SINE MIR -2 206 93 2875 186 70 9 chr2 134736465 134737136 -115950718 + L1MB8 LINE L1 5393 6104 -74 991 162 0 7 chr2 134737137 134737285 -115950569 - AluJo SINE Alu -165 147 1 335 169 39 0 chr2 134737285 134737362 -115950492 + L1MB8 LINE L1 6099 6178 0 458 238 134 6 chr2 134737861 134738025 -115949829 - MIR SINE MIR -1 261 77 313 284 65 65 chr2 134738028 134738197 -115949657 - MER5B DNA MER1_type -6 172 4 203 311 95 0 chr2 134739239 134739313 -115948541 + MIR SINE MIR 65 145 -117 641 200 32 0 chr2 134741163 134741288 -115946566 + FLAM_A SINE Alu 1 129 -4 400 322 84 34 chr2 134742038 134742361 -115945493 + L1ME2 LINE L1 983 1321 -5626 1042 264 103 40 chr2 134742542 134743266 -115944588 + L1ME2 LINE L1 1361 2330 -4808 495 0 0 0 chr2 134743266 134743321 -115944533 + (CA)n Simple_repeat Simple_repeat 2 56 0 1042 264 103 40 chr2 134743321 134743708 -115944146 + L1ME2 LINE L1 2330 2691 -4447 1020 218 4 86 chr2 134743791 134744034 -115943820 + MER58A DNA MER1_type 1 223 -1 1338 231 19 61 chr2 134744113 134744476 -115943378 + MLT2F LTR ERVL 308 655 -8 632 244 42 9 chr2 134744476 134744689 -115943165 + L1ME2 LINE L1 3986 4205 -2752 * 2026 235 11 17 chr2 134744685 134745158 -115942696 + L1ME2 LINE L1 6488 6957 -18 1932 148 0 10 chr2 134747639 134747929 -115939925 + AluSx SINE Alu 1 287 -25 286 200 42 42 chr2 134748117 134748212 -115939642 - L1MC5 LINE L1 -35 7926 7832 * 2027 253 114 19 chr2 134748211 134748820 -115939034 - L1M4 LINE L1 -2022 4124 3433 1822 175 10 3 chr2 134748820 134749117 -115938737 - AluJo SINE Alu -9 303 5 2027 253 114 19 chr2 134749117 134749237 -115938617 - L1M4 LINE L1 -2713 3433 3326 189 361 120 9 chr2 134750125 134750233 -115937621 - L3b LINE CR1 -2 1581 1462 364 231 148 28 chr2 134750681 134750863 -115936991 + L1ME3A LINE L1 5966 6169 -1 256 244 0 100 chr2 134750932 134751022 -115936832 + MER21B LTR ERV1 8 88 -775 229 241 0 17 chr2 134751045 134751103 -115936751 + MER21B LTR ERV1 19 75 -788 1229 115 111 14 chr2 134751110 134751318 -115936536 - MER30 DNA MER1_type -2 228 1 229 241 0 17 chr2 134751447 134751505 -115936349 - MER21B LTR ERV1 -788 75 19 229 263 0 35 chr2 134751528 134751585 -115936269 - MER21B LTR ERV1 -775 88 34 2608 225 85 25 chr2 134751601 134752281 -115935573 + MER21B LTR ERV1 89 809 -54 22631 19 0 0 chr2 134753120 134756489 -115931365 + L1HS LINE L1 2785 6153 -2 324 64 0 0 chr2 134756491 134756538 -115931316 + (A)n Simple_repeat Simple_repeat 1 47 0 1580 166 153 63 chr2 134758303 134758658 -115929196 + MLT1D LTR MaLR 7 414 -91 1503 213 106 54 chr2 134758658 134759138 -115928716 - MLT1D LTR MaLR 0 505 1 1580 166 153 63 chr2 134759138 134759240 -115928614 + MLT1D LTR MaLR 414 505 0 1543 289 97 38 chr2 134759801 134760894 -115926960 + L2 LINE L2 2063 3223 -90 261 280 85 34 chr2 134761696 134761814 -115926040 - MIR SINE MIR -32 230 107 436 168 54 21 chr2 134761832 134762017 -115925837 - ORSL DNA AcHobo -34 241 1 191 71 36 0 chr2 134762017 134762045 -115925809 - MIR SINE MIR -99 109 81 400 250 64 83 chr2 134762292 134762448 -115925406 + MER5A DNA MER1_type 21 173 -16 1267 275 65 15 chr2 134762483 134762948 -115924906 + MER20B DNA MER1_type 287 774 -9 1999 199 11 16 chr2 134763123 134763490 -115924364 - MLT1A1 LTR MaLR 0 365 1 787 237 56 9 chr2 134766035 134766250 -115921604 + L1ME3A LINE L1 5425 5649 -521 1256 181 80 64 chr2 134766312 134766673 -115921181 + MSTB2 LTR MaLR 86 457 0 919 176 49 82 chr2 134766685 134766929 -115920925 + L1ME3A LINE L1 5658 5893 -277 4818 52 3 3 chr2 134767516 134768097 -115919757 - LTR10C LTR ERV1 0 591 11 1753 163 0 4 chr2 134768918 134769194 -115918660 + AluJb SINE Alu 33 307 -5 403 301 139 14 chr2 134770949 134771158 -115916696 + L2 LINE L2 2828 3062 -251 1476 192 95 30 chr2 134771167 134771505 -115916349 - MLT1A1 LTR MaLR 0 365 6 298 297 99 30 chr2 134771634 134771735 -115916119 + L2 LINE L2 3181 3288 -25 2889 164 57 57 chr2 134772588 134773148 -115914706 - MER68 LTR ERV1 0 562 3 797 233 43 48 chr2 134774130 134774340 -115913514 - MER58A DNA MER1_type -15 209 1 311 277 144 25 chr2 134774612 134774814 -115913040 + L1ME4a LINE L1 5328 5553 -2255 1459 252 115 96 chr2 134775008 134775941 -115911913 + HAL1 LINE L1 633 1546 -961 2104 105 49 0 chr2 134775941 134776226 -115911628 + AluSx SINE Alu 5 303 -9 1459 252 115 96 chr2 134776226 134777130 -115910724 + HAL1 LINE L1 1546 2506 -1 400 221 172 28 chr2 134777113 134777258 -115910596 + L1ME4a LINE L1 5574 5739 -382 * 212 242 77 88 chr2 134778117 134778167 -115909687 - MER91C DNA MER1_type -17 123 73 1356 188 9 5 chr2 134778167 134778390 -115909464 - MER58A DNA MER1_type 0 224 1 212 242 77 88 chr2 134778390 134778430 -115909424 - MER91C DNA MER1_type -67 73 34 252 0 0 0 chr2 134778982 134779010 -115908844 + (A)n Simple_repeat Simple_repeat 1 28 0 223 332 253 5 chr2 134779324 134779514 -115908340 - MIR SINE MIR -3 259 23 708 237 124 26 chr2 134779803 134780069 -115907785 + L2 LINE L2 2995 3286 -27 240 183 84 42 chr2 134780099 134780170 -115907684 + L1ME4a LINE L1 6009 6082 -39 213 329 71 35 chr2 134781462 134781632 -115906222 - MIR SINE MIR -59 203 28 446 269 77 0 chr2 134781810 134781940 -115905914 - MIR SINE MIR -3 259 120 347 285 102 70 chr2 134784139 134784395 -115903459 + MLT1K LTR MaLR 140 403 -185 245 296 16 56 chr2 134784598 134784723 -115903131 + MLT1K LTR MaLR 465 584 -4 653 238 48 63 chr2 134784954 134785029 -115902825 - MIR SINE MIR -5 257 182 1822 147 84 28 chr2 134785029 134785384 -115902470 + THE1C LTR MaLR 1 375 0 653 238 48 63 chr2 134785384 134785567 -115902287 - MIR SINE MIR -80 182 7 815 238 47 23 chr2 134786643 134786766 -115901088 - MER20B DNA MER1_type 0 219 87 1715 147 22 29 chr2 134786766 134787080 -115900774 + AluJo SINE Alu 1 312 0 815 238 47 23 chr2 134787080 134787170 -115900684 - MER20B DNA MER1_type -132 87 1 246 32 0 0 chr2 134789000 134789031 -115898823 + (CA)n Simple_repeat Simple_repeat 2 32 0 243 170 0 0 chr2 134789614 134789661 -115898193 + (CA)n Simple_repeat Simple_repeat 1 47 0 397 197 14 0 chr2 134792836 134792907 -115894947 - L2 LINE L2 0 3313 3242 902 95 24 3 chr2 134793413 134793553 -115894301 + MSTB1 LTR MaLR 304 425 -7 333 241 92 0 chr2 134793553 134793640 -115894214 - MIR SINE MIR -68 194 100 581 248 233 10 chr2 134793766 134793972 -115893882 + MIR SINE MIR 6 257 -5 1217 188 33 5 chr2 134794466 134794679 -115893175 - MER20 DNA MER1_type 0 219 1 730 250 88 22 chr2 134795203 134795431 -115892423 - MIR SINE MIR -12 250 8 2062 115 3 16 chr2 134796144 134796448 -115891406 + AluSq SINE Alu 14 313 0 2207 99 23 7 chr2 134796458 134796761 -115891093 - AluSg SINE Alu 0 310 3 181 326 151 12 chr2 134797530 134797616 -115890238 + MER5B DNA MER1_type 1 98 -80 26 0 0 0 chr2 134797956 134797982 -115889872 + AT_rich Low_complexity Low_complexity 1 26 0 374 259 116 0 chr2 134798175 134798287 -115889567 + L2 LINE L2 3148 3272 0 2527 69 3 0 chr2 134798329 134798633 -115889221 + AluSp SINE Alu 1 305 -8 1412 164 116 30 chr2 134799965 134800233 -115887621 + AluJo SINE Alu 1 291 -21 887 220 11 6 chr2 134800243 134800449 -115887405 + AluJb SINE Alu 131 312 0 417 279 27 20 chr2 134800462 134800609 -115887245 - MIR SINE MIR -47 215 68 495 232 31 62 chr2 134800837 134801031 -115886823 - L2 LINE L2 -18 3295 3108 251 125 25 0 chr2 134801081 134801121 -115886733 - MER58A DNA MER1_type -15 92 52 234 91 0 0 chr2 134801928 134801961 -115885893 + (A)n Simple_repeat Simple_repeat 1 33 0 381 306 180 28 chr2 134802468 134802857 -115884997 + L2 LINE L2 2804 3251 -62 183 229 214 0 chr2 134803819 134803889 -115883965 - MIR SINE MIR -166 96 12 884 236 133 0 chr2 134804070 134804265 -115883589 - MER58A DNA MER1_type 0 224 4 430 221 21 11 chr2 134804434 134804529 -115883325 - MER58A DNA MER1_type -11 96 1 225 0 0 0 chr2 134804795 134804820 -115883034 + (A)n Simple_repeat Simple_repeat 1 25 0 2092 110 38 0 chr2 134805136 134805428 -115882426 + AluSx SINE Alu 1 303 -9 584 181 187 19 chr2 134805525 134805680 -115882174 + MER20 DNA MER1_type 35 215 -4 189 107 0 0 chr2 134806670 134806698 -115881156 + (CA)n Simple_repeat Simple_repeat 2 29 0 311 180 16 0 chr2 134807112 134807173 -115880681 + L1MCa LINE L1 2006 2067 -4359 335 289 45 19 chr2 134807182 134807338 -115880516 + L1ME4a LINE L1 5935 6094 -27 335 257 117 65 chr2 134810356 134810570 -115877284 - MIR SINE MIR -29 233 9 443 241 0 0 chr2 134810665 134810752 -115877102 + MER58 DNA MER1_type 128 2419 -1 826 207 63 0 chr2 134810763 134810937 -115876917 + MER5A DNA MER1_type 1 185 -4 2488 155 78 8 chr2 134811316 134811788 -115876066 + L1MA6 LINE L1 5791 6295 -5 3743 172 38 42 chr2 134813381 134814189 -115873665 + L1MB8 LINE L1 5374 6178 0 182 273 0 0 chr2 134815111 134815155 -115872699 + L2 LINE L2 3224 3267 -5 201 39 0 0 chr2 134816022 134816048 -115871806 + (T)n Simple_repeat Simple_repeat 1 26 0 180 0 0 0 chr2 134817220 134817240 -115870614 + (T)n Simple_repeat Simple_repeat 1 20 0 2317 50 11 0 chr2 134818099 134818382 -115869472 + AluY SINE Alu 1 286 -25 652 174 67 96 chr2 134818463 134818641 -115869213 - MER20 DNA MER1_type -4 215 43 643 249 12 30 chr2 134820097 134820266 -115867588 - MER5B DNA MER1_type -7 171 6 288 350 0 0 chr2 134820681 134820784 -115867070 + MER5A DNA MER1_type 1 103 -86 21 0 0 0 chr2 134822832 134822853 -115865001 + AT_rich Low_complexity Low_complexity 1 21 0 488 210 108 67 chr2 134823661 134823856 -115863998 + MLT1D LTR MaLR 1 203 -302 2188 113 0 3 chr2 134824109 134824418 -115863436 + AluY SINE Alu 1 308 -3 2146 125 3 10 chr2 134824434 134824747 -115863107 - AluSq SINE Alu -2 311 1 477 290 60 15 chr2 134825099 134825282 -115862572 - MIR SINE MIR -55 153 6 2402 98 0 0 chr2 134825360 134825666 -115862188 + AluSg SINE Alu 1 306 -4 434 77 0 0 chr2 134825666 134825731 -115862123 + Alu SINE Alu 242 306 -4 * 442 68 0 0 chr2 134825730 134825789 -115862065 + Alu SINE Alu 242 300 -11 303 93 0 0 chr2 134826247 134826290 -115861564 + (CA)n Simple_repeat Simple_repeat 1 43 0 201 311 10 39 chr2 134826502 134826605 -115861249 - L2 LINE L2 -6 3307 3208 2332 82 142 6 chr2 134826694 134827024 -115860830 - THE1C LTR MaLR 0 375 1 399 305 54 24 chr2 134827960 134828127 -115859727 - MER5B DNA MER1_type -6 172 1 542 289 52 32 chr2 134828202 134828451 -115859403 - Charlie8 DNA MER1_type -2137 280 27 202 332 90 9 chr2 134829531 134829658 -115858196 + MIR SINE MIR 3 143 -65 311 214 218 5 chr2 134830701 134830881 -115856973 + L1MD2 LINE L1 6198 7806 -2 380 288 34 97 chr2 134831163 134831430 -115856424 - L2 LINE L2 -701 2613 2364 588 164 31 8 chr2 134832001 134832129 -115855725 - L1MB8 LINE L1 0 6178 6048 512 218 0 0 chr2 134832129 134832216 -115855638 - 5S rRNA rRNA -33 88 2 3300 186 84 32 chr2 134832224 134832564 -115855290 - L1MB8 LINE L1 -119 6059 5738 180 0 0 0 chr2 134832564 134832584 -115855270 + (TG)n Simple_repeat Simple_repeat 2 21 0 3300 186 84 32 chr2 134832584 134832772 -115855082 - L1MB8 LINE L1 -440 5738 5561 1709 103 82 31 chr2 134832772 134833018 -115854836 - L1MA5A LINE L1 -3 6294 6029 2438 127 18 0 chr2 134833018 134833349 -115854505 + MER1B DNA MER1_type 1 337 0 1709 103 82 31 chr2 134833349 134833394 -115854460 - L1MA5A LINE L1 -268 6029 5988 3300 186 84 32 chr2 134833394 134833674 -115854180 - L1MB8 LINE L1 -617 5561 5207 1080 227 122 0 chr2 134833866 134834201 -115853653 - LTR37A LTR ERV1 -1 425 50 970 205 156 102 chr2 134834277 134834687 -115853167 - LTR41 LTR ERVL 0 773 342 973 158 41 6 chr2 134834752 134834923 -115852931 - LTR41 LTR ERVL -594 179 3 603 249 100 48 chr2 134836364 134836593 -115851261 + MER102b DNA MER1_type 89 329 -12 400 181 149 0 chr2 134838063 134838157 -115849697 - MER5A DNA MER1_type -76 113 6 2116 121 13 3 chr2 134838308 134838615 -115849239 - AluJb SINE Alu -2 310 1 8068 128 83 12 chr2 134839306 134840699 -115847155 + MER4E-int LTR ERV1 5154 6645 -113 22 35 0 0 chr2 134840916 134840945 -115846909 + AT_rich Low_complexity Low_complexity 1 29 0 5247 78 33 60 chr2 134841527 134841928 -115845926 + MER4E LTR ERV1 1 372 -394 195 42 0 0 chr2 134841928 134841952 -115845902 + (TC)n Simple_repeat Simple_repeat 2 25 0 5247 78 33 60 chr2 134841952 134842337 -115845517 + MER4E LTR ERV1 372 766 0 368 287 109 50 chr2 134843398 134843600 -115844254 - MIR SINE MIR 0 262 49 421 213 63 47 chr2 134843619 134843746 -115844108 - MER119 DNA MER1_type 0 583 455 522 204 74 0 chr2 134843757 134843865 -115843989 - MER119 DNA MER1_type -460 123 8 1441 225 112 58 chr2 134844565 134845085 -115842769 + MLT1H LTR MaLR 1 548 -1 703 100 55 18 chr2 134846604 134846714 -115841140 + FRAM SINE Alu 25 138 -38 1203 169 0 29 chr2 134846714 134846921 -115840933 - AluJb SINE Alu -110 202 2 393 318 68 0 chr2 134846927 134847059 -115840795 + L2 LINE L2 3173 3313 0 427 247 167 29 chr2 134849835 134850009 -115837845 + MLT1J LTR MaLR 314 511 0 207 184 41 0 chr2 134850577 134850626 -115837228 + L2 LINE L2 3262 3312 -1 1041 116 172 15 chr2 134850803 134851001 -115836853 + MER30 DNA MER1_type 2 230 0 223 301 65 0 chr2 134851698 134851791 -115836063 - MIR SINE MIR -86 122 24 477 0 0 0 chr2 134853930 134853983 -115833871 + (CA)n Simple_repeat Simple_repeat 2 54 0 1462 208 32 0 chr2 134854258 134854542 -115833312 + AluJo SINE Alu 18 310 -2 180 0 0 0 chr2 134854964 134854984 -115832870 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 744 228 54 66 chr2 134855210 134855451 -115832403 - MSTD LTR MaLR 0 396 159 189 0 0 0 chr2 134855898 134855919 -115831935 + (GGA)n Simple_repeat Simple_repeat 3 23 0 189 0 0 0 chr2 134856119 134856140 -115831714 + (GGA)n Simple_repeat Simple_repeat 3 23 0 908 195 31 10 chr2 134856199 134856394 -115831460 - MSTD LTR MaLR -197 199 1 183 171 0 0 chr2 134856497 134856532 -115831322 - MIR SINE MIR -9 253 219 443 192 0 0 chr2 134856609 134856687 -115831167 + FLAM SINE Alu 47 124 -19 1756 151 17 17 chr2 134856702 134857001 -115830853 + AluJb SINE Alu 1 299 -13 2349 108 0 0 chr2 134857751 134858058 -115829796 + AluSc SINE Alu 1 307 -2 1337 256 76 66 chr2 134858371 134858964 -115828890 + MER21B LTR ERV1 141 739 -124 720 237 89 34 chr2 134859101 134859337 -115828517 - MIR SINE MIR 0 262 14 394 302 54 27 chr2 134859908 134860057 -115827797 - L2 LINE L2 0 3313 3161 231 263 0 0 chr2 134860162 134860219 -115827635 - L2 LINE L2 -430 2883 2827 606 283 209 19 chr2 134860243 134860893 -115826961 + L2 LINE L2 2544 3313 0 1279 99 6 0 chr2 134862456 134862637 -115825217 - L1PB2 LINE L1 -102 6049 5868 681 125 19 0 chr2 134862637 134862739 -115825115 + L1PB2 LINE L1 6043 6148 -3 281 288 0 0 chr2 134862974 134863047 -115824807 - L2 LINE L2 -11 3302 3230 234 171 73 61 chr2 134863082 134863164 -115824690 + L1PA15-16 LINE L1 1925 2007 -4842 2584 55 0 13 chr2 134864561 134864870 -115822984 + AluY SINE Alu 1 305 -6 805 203 54 83 chr2 134864881 134865157 -115822697 + L1ME3A LINE L1 5902 6169 -1 2534 209 95 53 chr2 134865387 134866201 -115821653 - MER97a DNA MER1_type? -33 861 14 866 169 149 26 chr2 134866318 134866513 -115821341 - MER20 DNA MER1_type 0 219 1 292 295 93 31 chr2 134867065 134867194 -115820660 + MIR SINE MIR 66 202 -60 3594 157 41 3 chr2 134867313 134867925 -115819929 - MER41B LTR ERV1 0 635 1 212 287 188 0 chr2 134867971 134868072 -115819782 + MIR SINE MIR 8 127 -135 2838 195 62 29 chr2 134868107 134868722 -115819132 + MER82 DNA MER2_type 18 652 -1 216 233 233 12 chr2 134868723 134868809 -115819045 + MIR SINE MIR 156 260 -2 549 223 96 35 chr2 134869013 134869210 -115818644 + LTR33A LTR ERVL 1 209 -314 416 261 139 6 chr2 134869255 134869420 -115818434 + LTR33A LTR ERVL 320 506 -17 180 0 0 0 chr2 134869559 134869579 -115818275 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 527 201 86 40 chr2 134870101 134870275 -115817579 + MLT1J2 LTR MaLR 15 196 -254 652 216 130 10 chr2 134870827 134871035 -115816819 + MER5C DNA MER1_type 1 233 -91 2268 112 0 7 chr2 134871055 134871360 -115816494 - AluSg SINE Alu -7 303 1 2386 78 0 13 chr2 134874965 134875272 -115812582 + AluY SINE Alu 1 303 -8 2658 147 48 4 chr2 134876299 134876754 -115811100 - LTR26E LTR ERV1 -147 475 1 597 266 208 0 chr2 134877238 134877479 -115810375 + MER20B DNA MER1_type 35 325 -458 817 231 58 32 chr2 134877559 134877867 -115809987 + MER20B DNA MER1_type 463 778 -5 345 229 131 8 chr2 134878177 134878299 -115809555 + MIR SINE MIR 2 138 -124 1447 124 0 9 chr2 134878303 134878528 -115809326 - pTR5 LTR ERV1 -2044 394 172 290 276 10 0 chr2 134878531 134878629 -115809225 - LTR30 LTR ERV1 -80 642 544 2494 105 108 159 chr2 134878629 134879317 -115808537 - pTR5 LTR ERV1 -413 2025 1216 207 170 0 0 chr2 134879346 134879393 -115808461 + (GTGTG)n Simple_repeat Simple_repeat 5 51 0 2235 125 0 7 chr2 134879641 134879946 -115807908 + AluSx SINE Alu 1 303 -9 444 19 0 0 chr2 134881361 134881414 -115806440 + (TG)n Simple_repeat Simple_repeat 2 54 0 924 124 0 0 chr2 134881423 134881544 -115806310 - AluJb SINE Alu -191 121 1 1113 157 41 13 chr2 134881875 134882105 -115805749 - L1MD3 LINE L1 0 7785 7544 254 125 0 0 chr2 134882966 134883006 -115804848 + MER5A DNA MER1_type 146 185 -4 430 293 65 42 chr2 134883175 134883575 -115804279 - L2 LINE L2 -93 3220 2812 433 246 143 27 chr2 134883652 134883876 -115803978 - MIR SINE MIR 0 262 13 290 281 185 0 chr2 134883916 134884051 -115803803 - L2 LINE L2 -594 2720 2561 21 0 0 0 chr2 134885239 134885260 -115802594 + AT_rich Low_complexity Low_complexity 1 21 0 1363 226 66 26 chr2 134885723 134886100 -115801754 - MSTD LTR MaLR -4 392 1 552 273 22 0 chr2 134886118 134886257 -115801597 + MIR SINE MIR 23 164 -98 186 322 35 11 chr2 134886520 134886607 -115801247 - MIR3 SINE MIR -10 198 110 578 177 177 0 chr2 134888136 134888249 -115799605 - MER94 DNA DNA 0 134 2 764 164 47 35 chr2 134888878 134889049 -115798805 + FRAM SINE Alu 1 165 -11 1717 207 34 38 chr2 134890310 134890431 -115797423 - Charlie4a DNA MER1_type -1485 476 356 2068 117 3 10 chr2 134890431 134890755 -115797099 - AluSx SINE Alu 0 312 1 1717 207 34 38 chr2 134890755 134891078 -115796776 - Charlie4a DNA MER1_type -1605 356 34 2201 75 0 0 chr2 134891321 134891586 -115796268 - AluSc SINE Alu -2 307 43 885 144 67 17 chr2 134892466 134892646 -115795208 + MER5A DNA MER1_type 1 189 0 202 242 65 0 chr2 134894079 134894141 -115793713 - MIR SINE MIR -102 160 95 2487 65 0 0 chr2 134894252 134894545 -115793309 - AluY SINE Alu -18 293 1 780 215 84 0 chr2 134894824 134895015 -115792839 - MER3 DNA MER1_type -2 207 1 289 83 0 33 chr2 134895136 134895196 -115792658 + (TTTTG)n Simple_repeat Simple_repeat 2 59 0 661 179 9 0 chr2 134895199 134895311 -115792543 - FAM SINE Alu -28 157 45 565 284 45 0 chr2 134897156 134897311 -115790543 + MIR SINE MIR 95 256 -6 529 273 75 40 chr2 134897350 134897603 -115790251 + MIR SINE MIR 1 262 0 1909 133 10 7 chr2 134897829 134898130 -115789724 - AluSx SINE Alu -10 302 1 452 234 81 0 chr2 134899205 134899329 -115788525 - MIR SINE MIR -79 183 50 2110 92 23 7 chr2 134899573 134899879 -115787975 + AluY SINE Alu 1 311 0 898 142 51 62 chr2 134900306 134900482 -115787372 - AluSx SINE Alu -138 174 1 2090 103 0 50 chr2 134900924 134901244 -115786610 + AluSx SINE Alu 1 304 -8 648 259 110 22 chr2 134904074 134904457 -115783397 + LTR33 LTR ERVL 75 520 -1 291 232 49 0 chr2 134904861 134904943 -115782911 - MIR SINE MIR -83 179 94 2047 102 13 20 chr2 134905079 134905384 -115782470 + AluSx SINE Alu 1 303 -9 586 222 90 24 chr2 134905708 134905875 -115781979 - MER5B DNA MER1_type 0 178 1 1633 216 100 7 chr2 134905916 134906347 -115781507 - Charlie4a DNA MER1_type 0 508 38 219 69 0 0 chr2 134906519 134906548 -115781306 + (T)n Simple_repeat Simple_repeat 1 29 0 1820 149 0 7 chr2 134907573 134907868 -115779986 - AluJo SINE Alu -19 293 1 526 277 92 19 chr2 134908302 134908508 -115779346 - MIR SINE MIR -22 240 20 2202 99 0 0 chr2 134908586 134908879 -115778975 - AluY SINE Alu -18 293 1 303 96 0 0 chr2 134908898 134908950 -115778904 + (CA)n Simple_repeat Simple_repeat 2 53 0 338 200 44 44 chr2 134909342 134909477 -115778377 - Charlie7 DNA MER1_type 0 2612 2478 276 221 42 32 chr2 134909454 134909549 -115778305 - Charlie7 DNA MER1_type -2470 142 47 * 2827 125 14 2 chr2 134909579 134910002 -115777852 + MSTA LTR MaLR 1 428 0 905 197 61 61 chr2 134910774 134911038 -115776816 - L1MB5 LINE L1 0 6174 5911 762 186 0 0 chr2 134911225 134911343 -115776511 + FLAM_C SINE Alu 1 118 -15 474 247 69 52 chr2 134911508 134911720 -115776134 + MIR SINE MIR 41 261 -1 209 257 142 18 chr2 134911840 134911953 -115775901 + L2 LINE L2 2154 2280 -1034 271 250 25 33 chr2 134912398 134912518 -115775336 - pTR5 LTR ERV1 -1094 1344 1226 214 281 0 0 chr2 134912558 134912622 -115775232 + (CGGTG)n Simple_repeat Simple_repeat 1 64 0 1676 175 81 29 chr2 134912623 134913069 -115774785 - pTR5 LTR ERV1 -1229 1209 741 1696 191 97 32 chr2 134913351 134913816 -115774038 + MLT1D LTR MaLR 1 495 -10 1504 160 0 78 chr2 134913954 134914273 -115773581 + AluJo SINE Alu 3 296 -16 876 149 0 8 chr2 134914544 134914749 -115773105 - FLAM_C SINE Alu 0 204 1 211 355 43 11 chr2 134916411 134916504 -115771350 - MIR3 SINE MIR -5 203 108 337 233 78 29 chr2 134917249 134917352 -115770502 + MIR SINE MIR 42 149 -59 627 306 42 10 chr2 134917470 134917663 -115770191 + MIR SINE MIR 25 223 -39 27 0 0 0 chr2 134917850 134917877 -115769977 + AT_rich Low_complexity Low_complexity 1 27 0 215 288 17 0 chr2 134918709 134918768 -115769086 + L2 LINE L2 3200 3259 -13 204 176 0 162 chr2 134919702 134919770 -115768084 + L3 LINE CR1 1510 1566 -11 2209 88 3 0 chr2 134920432 134920726 -115767128 + AluSq SINE Alu 1 295 -18 35 54 0 0 chr2 134922657 134922713 -115765141 + GC_rich Low_complexity Low_complexity 1 56 0 21 0 0 0 chr2 134922740 134922761 -115765093 + GC_rich Low_complexity Low_complexity 1 21 0 392 257 169 0 chr2 134923327 134923475 -115764379 + MIR SINE MIR 67 239 -23 180 333 0 0 chr2 134923969 134924014 -115763840 - MIR3 SINE MIR -35 173 129 351 328 81 53 chr2 134925259 134925506 -115762348 - MIR SINE MIR -6 256 3 1447 165 0 11 chr2 134925999 134926260 -115761594 - AluJo SINE Alu 0 312 55 261 226 0 0 chr2 134926262 134926315 -115761539 + LTR67 LTR ERVL 505 557 0 806 88 0 0 chr2 134926555 134926657 -115761197 + AluY SINE Alu 2 103 -208 1702 130 0 8 chr2 134926758 134927012 -115760842 - AluSc SINE Alu -57 252 1 477 325 28 14 chr2 134927529 134927770 -115760084 + ERVL LTR ERVL 832 1203 -4005 889 247 54 0 chr2 134927815 134928038 -115759816 - MIR SINE MIR -21 241 7 413 290 50 85 chr2 134928078 134928278 -115759576 + ERVL LTR ERVL 1258 1450 -4314 548 256 96 73 chr2 134928496 134928872 -115758982 + MLT1L LTR MaLR 204 508 -3 1655 219 93 30 chr2 134929557 134929798 -115758056 - MLT1D LTR MaLR 0 505 281 2010 110 17 0 chr2 134929798 134930088 -115757766 - AluSx SINE Alu -17 295 1 1655 219 93 30 chr2 134930088 134930131 -115757723 - MLT1D LTR MaLR -224 281 242 1914 126 7 17 chr2 134930131 134930433 -115757421 - AluSg SINE Alu -11 299 1 1655 219 93 30 chr2 134930433 134930621 -115757233 - MLT1D LTR MaLR -263 242 2 1799 223 50 121 chr2 134930623 134931058 -115756796 - MLT1D-int LTR MaLR -1 1734 1270 2795 3 0 0 chr2 134931058 134931366 -115756488 - AluYa5 SINE Alu -3 308 1 1799 223 50 121 chr2 134931366 134931452 -115756402 - MLT1D-int LTR MaLR -465 1270 1179 1998 141 3 3 chr2 134931452 134931764 -115756090 - AluSx SINE Alu 0 312 1 1799 223 50 121 chr2 134931764 134932028 -115755826 - MLT1D-int LTR MaLR -556 1179 659 829 177 0 0 chr2 134932098 134932222 -115755632 + FLAM_C SINE Alu 2 125 -18 4816 125 80 59 chr2 134932358 134933801 -115754053 + pTR5 LTR ERV1 49 2438 0 668 174 121 0 chr2 134933801 134934005 -115753849 - MLT1D-int LTR MaLR -1009 362 1 1799 176 144 44 chr2 134934005 134934464 -115753390 - MLT1D LTR MaLR 0 505 1 225 179 0 0 chr2 134934549 134934588 -115753266 + MLT1H LTR MaLR 137 175 -374 298 183 7 0 chr2 134934802 134934866 -115752988 + MLT1G LTR MaLR 470 577 -13 2078 105 3 0 chr2 134935112 134935407 -115752447 + AluSg SINE Alu 1 296 -14 207 0 0 0 chr2 134935650 134935673 -115752181 + (TG)n Simple_repeat Simple_repeat 2 24 0 448 187 9 75 chr2 134935687 134935794 -115752060 - MER63A DNA MER1_type -35 175 76 430 202 77 10 chr2 134935773 134935877 -115751977 - MER112 DNA MER1_type -145 115 5 * 3773 61 4 0 chr2 134936571 134937046 -115750808 - L1PA8 LINE L1 -9 6163 5687 434 275 153 16 chr2 134937603 134937792 -115750062 - MIR SINE MIR -29 233 19 2008 115 3 3 chr2 134938128 134938423 -115749431 + AluSx SINE Alu 1 295 -17 426 182 27 158 chr2 134938541 134938720 -115749134 + MER92B LTR ERV1 3 162 -392 332 182 0 0 chr2 134938785 134938851 -115749003 + MER92C LTR ERV1 487 552 -2 766 189 60 84 chr2 134939203 134939250 -115748604 + LTR49-int LTR ERV1 1040 1087 -3849 1844 151 14 0 chr2 134939250 134939541 -115748313 - AluJb SINE Alu -14 298 4 766 189 60 84 chr2 134939541 134939742 -115748112 + LTR49-int LTR ERV1 1087 1282 -3654 1486 220 22 103 chr2 134939844 134940786 -115747068 + LTR49-int LTR ERV1 2211 3066 -1870 192 337 34 22 chr2 134940932 134941021 -115746833 + MER5B DNA MER1_type 1 90 -88 2101 122 0 0 chr2 134941125 134941421 -115746433 - AluSx SINE Alu -16 296 1 260 35 0 0 chr2 134941672 134941701 -115746153 - MER31-int LTR ERV1 -567 4369 4341 658 242 30 122 chr2 134941724 134942059 -115745795 + LTR49-int LTR ERV1 4465 4768 -1563 1919 106 3 34 chr2 134942088 134942381 -115745473 - AluSg SINE Alu -16 294 11 2712 232 12 48 chr2 134942400 134943206 -115744648 + LTR49-int LTR ERV1 3473 4249 -687 474 235 31 37 chr2 134943207 134943369 -115744485 + LTR37A LTR ERV1 1 161 -265 695 220 0 71 chr2 134944249 134944417 -115743437 + MER92B LTR ERV1 5 160 -476 473 135 0 0 chr2 134944464 134944538 -115743316 + MER92C LTR ERV1 481 554 0 293 299 104 22 chr2 134944748 134944882 -115742972 + LTR33 LTR ERVL 77 221 -300 418 261 111 40 chr2 134944916 134945115 -115742739 + LTR33 LTR ERVL 309 521 0 335 331 66 80 chr2 134945236 134945674 -115742180 + L2 LINE L2 2837 3268 -4 2245 86 0 29 chr2 134945695 134946009 -115741845 + AluSg SINE Alu 1 305 -5 359 341 56 17 chr2 134946690 134946869 -115740985 - MIR3 SINE MIR -2 206 21 896 304 43 25 chr2 134946996 134947394 -115740460 + MLT1I LTR MaLR 3 407 -2 698 189 6 69 chr2 134948139 134948314 -115739540 - MER103 DNA DNA -2 164 1 2036 119 6 19 chr2 134948734 134949045 -115738809 - AluSx SINE Alu -5 307 1 195 329 94 0 chr2 134949249 134949334 -115738520 - L2 LINE L2 -65 3207 3115 * 941 232 33 12 chr2 134949331 134949572 -115738282 - MIR SINE MIR 0 262 17 333 304 36 41 chr2 134949631 134949825 -115738029 - L2 LINE L2 -166 3106 2914 1721 169 3 34 chr2 134950078 134950398 -115737456 + AluJo SINE Alu 1 310 -2 715 173 106 115 chr2 134950603 134950811 -115737043 - MER20 DNA MER1_type 0 219 14 631 254 12 12 chr2 134950825 134950998 -115736856 + MER5A DNA MER1_type 15 187 -2 2814 13 0 3 chr2 134951430 134951740 -115736114 + AluY SINE Alu 1 309 -2 216 0 0 0 chr2 134952975 134952999 -115734855 + (CACAA)n Simple_repeat Simple_repeat 4 27 0 217 355 26 13 chr2 134953363 134953439 -115734415 - L2 LINE L2 -94 3178 3102 2564 220 32 16 chr2 134953650 134953841 -115734013 - MER119 DNA MER1_type 0 583 397 1984 102 7 41 chr2 134953841 134954171 -115733683 - AluSx SINE Alu 0 320 1 2564 220 32 16 chr2 134954171 134954546 -115733308 - MER119 DNA MER1_type -186 397 7 1844 171 72 14 chr2 134955718 134956081 -115731773 - MLT1F LTR MaLR -7 535 152 2175 61 29 14 chr2 134956122 134956429 -115731425 - AluY SINE Alu 0 311 1 1264 206 73 0 chr2 134956458 134956706 -115731148 - AluJo SINE Alu -46 266 1 485 235 0 0 chr2 134956731 134956833 -115731021 - MLT1F LTR MaLR -465 102 1 1029 198 5 14 chr2 134956887 134957104 -115730750 - L1MB7 LINE L1 -9 6175 5961 2128 113 0 29 chr2 134957115 134957426 -115730428 - AluSx SINE Alu -10 302 1 220 303 118 13 chr2 134958807 134959045 -115728809 + L2 LINE L2 3051 3313 0 361 305 69 29 chr2 134959088 134959262 -115728592 - MIR SINE MIR -62 200 20 261 186 136 0 chr2 134959536 134959595 -115728259 + L1MC4a LINE L1 5841 5907 -1901 3864 167 30 3 chr2 134959621 134960315 -115727539 + L1MC1 LINE L1 5620 6332 -1 1397 219 60 60 chr2 134961996 134962499 -115725355 + MLT1D LTR MaLR 1 503 -2 184 225 25 142 chr2 134963513 134963633 -115724221 + L2 LINE L2 3159 3264 -8 186 282 94 77 chr2 134963943 134964124 -115723730 + L2 LINE L2 2898 3081 -191 434 329 48 19 chr2 134964264 134964471 -115723383 - MIR SINE MIR -2 260 48 1943 105 69 4 chr2 134964475 134964752 -115723102 - AluSq SINE Alu -18 295 1 30 0 0 0 chr2 134964758 134964788 -115723066 + AT_rich Low_complexity Low_complexity 1 30 0 2507 114 11 13 chr2 134964788 134965164 -115722690 - L1PA16 LINE L1 -9 6157 5783 1721 139 135 7 chr2 134965164 134965467 -115722387 - MSTA LTR MaLR -1 427 86 7691 164 178 25 chr2 134965467 134966987 -115720867 + MER52A LTR ERV1 1 1753 -2 738 112 0 0 chr2 134966987 134967078 -115720776 - MSTA LTR MaLR -337 91 1 1132 108 0 0 chr2 134967078 134967236 -115720618 - L1PA16 LINE L1 -378 5788 5631 311 222 12 0 chr2 134967409 134967490 -115720364 + MLT1I LTR MaLR 61 142 -267 599 168 0 0 chr2 134968147 134968294 -115719560 + AluJb SINE Alu 198 344 0 244 327 73 0 chr2 134969903 134970013 -115717841 + L1ME4a LINE L1 5686 5803 -367 1938 126 0 58 chr2 134970133 134970443 -115717411 + AluSx SINE Alu 1 292 -20 216 326 43 33 chr2 134971002 134971094 -115716760 - L3b LINE CR1 -115 1468 1376 231 36 0 0 chr2 134971274 134971302 -115716552 + (TA)n Simple_repeat Simple_repeat 2 29 0 390 21 0 0 chr2 134971321 134971368 -115716486 + (CA)n Simple_repeat Simple_repeat 2 48 0 309 242 40 20 chr2 134971387 134971486 -115716368 + L1ME4a LINE L1 6013 6113 -8 1405 181 3 91 chr2 134971898 134972228 -115715626 - MLT1A2 LTR MaLR -5 369 69 309 274 41 0 chr2 134972228 134972301 -115715553 + Tigger3(Golem) DNA MER2_type 1 76 -2953 616 226 26 0 chr2 134972309 134972424 -115715430 + Tigger3(Golem) DNA MER2_type 2921 3038 0 410 95 48 16 chr2 134972429 134972492 -115715362 - MLT1A2 LTR MaLR -309 65 1 2108 130 7 0 chr2 134972710 134973003 -115714851 - AluSx SINE Alu -17 295 1 538 196 0 0 chr2 134973275 134973553 -115714301 - AluSg/x SINE Alu 0 489 212 30 0 0 0 chr2 134974380 134974410 -115713444 + AT_rich Low_complexity Low_complexity 1 30 0 211 48 24 48 chr2 134974410 134974452 -115713402 + (TTTTTA)n Simple_repeat Simple_repeat 1 41 0 7740 29 0 0 chr2 134974452 134975432 -115712422 - L1PA4 LINE L1 -1 6154 5175 39196 58 1 9 chr2 134975432 134977298 -115710556 - L1PA4 LINE L1 -1225 4921 3041 7147 67 8 18 chr2 134977298 134978824 -115709030 - SVA Other Other -760 1382 68 279 0 0 0 chr2 134978825 134978856 -115708998 + (GGGAGA)n Simple_repeat Simple_repeat 1 31 0 39196 58 1 9 chr2 134978856 134981947 -115705907 - L1PA4 LINE L1 -3104 3042 1 195 172 65 6 chr2 134981964 134982133 -115705721 + (TA)n Simple_repeat Simple_repeat 1 179 0 21 0 0 0 chr2 134982178 134982199 -115705655 + AT_rich Low_complexity Low_complexity 1 21 0 1514 87 24 0 chr2 134982233 134982476 -115705378 + L1PA10 LINE L1 5939 6186 0 258 224 26 13 chr2 134982481 134982557 -115705297 + L2 LINE L2 2583 2659 -655 258 227 0 0 chr2 134982613 134982688 -115705166 + (TA)n Simple_repeat Simple_repeat 1 75 0 233 220 0 0 chr2 134982788 134982838 -115705016 - MIR SINE MIR -115 93 44 680 324 43 8 chr2 134982935 134983188 -115704666 - MIR SINE MIR 0 262 1 754 149 0 0 chr2 134983317 134983438 -115704416 + L1PA15 LINE L1 5569 5689 -476 2530 175 15 7 chr2 134983498 134983956 -115703898 + L1PA15 LINE L1 5702 6163 -2 420 20 0 0 chr2 134984184 134984233 -115703621 + (TG)n Simple_repeat Simple_repeat 1 49 0 282 242 39 112 chr2 134984348 134984526 -115703328 - L2 LINE L2 -564 2750 2586 439 159 106 44 chr2 134985046 134985159 -115702695 - L2 LINE L2 -1 3312 3193 303 275 118 14 chr2 134986555 134986733 -115701121 + L1MC/D LINE L1 5662 5856 -297 31 0 0 0 chr2 134986789 134986820 -115701034 + AT_rich Low_complexity Low_complexity 1 31 0 1463 147 17 4 chr2 134986849 134987080 -115700774 - AluJo SINE Alu -15 297 64 2022 153 52 22 chr2 134987182 134987806 -115700048 + MER4D LTR ERV1 1 898 -5 4846 141 16 67 chr2 134987862 134988368 -115699486 - L1MB3 LINE L1 -2 6181 5651 2450 87 0 0 chr2 134988368 134988668 -115699186 - AluY SINE Alu -11 300 1 4846 141 16 67 chr2 134988668 134989124 -115698730 - L1MB3 LINE L1 -532 5651 5173 2178 168 54 0 chr2 134989124 134989494 -115698360 + MLT1B LTR MaLR 1 390 0 4846 141 16 67 chr2 134989494 134989639 -115698215 - L1MB3 LINE L1 -1010 5173 5142 2442 98 91 15 chr2 134989639 134990037 -115697817 + MSTA LTR MaLR 1 428 0 4846 141 16 67 chr2 134990037 134990071 -115697783 - L1MB3 LINE L1 -1041 5142 5108 710 225 40 17 chr2 134990373 134990546 -115697308 + MLT1D LTR MaLR 1 177 -328 6103 185 28 33 chr2 134990551 134992021 -115695833 - L1MC1 LINE L1 -9 6604 5147 1874 166 28 0 chr2 134992021 134992310 -115695544 - AluJb SINE Alu -15 297 1 6103 185 28 33 chr2 134992310 134993298 -115694556 - L1MC1 LINE L1 -1466 5147 4156 36024 44 1 0 chr2 134993311 134999436 -115688418 - L1PA4 LINE L1 0 6155 26 5448 207 47 30 chr2 134999438 135001051 -115686803 - L1MC1 LINE L1 -2259 4167 2582 2116 133 125 8 chr2 135001051 135001434 -115686420 + MSTA LTR MaLR 1 428 0 9346 143 6 60 chr2 135001435 135003103 -115684751 + MSTA-int LTR MaLR 3 1580 0 1877 152 149 11 chr2 135003103 135003479 -115684375 + MSTA LTR MaLR 1 428 0 5448 207 47 30 chr2 135003479 135003569 -115684285 - L1MC1 LINE L1 -3844 2582 2495 1734 197 7 0 chr2 135003569 135003864 -115683990 - AluJo SINE Alu -15 297 1 5448 207 47 30 chr2 135003864 135004487 -115683367 - L1MC1 LINE L1 -3931 2495 1802 953 224 122 32 chr2 135004489 135004801 -115683053 + MLT1D LTR MaLR 166 505 0 434 283 50 44 chr2 135004804 135004984 -115682870 + LTR16C LTR ERVL 297 477 -14 391 274 62 9 chr2 135005332 135005445 -115682409 + ERVL LTR ERVL 3081 3199 -2455 1981 343 55 15 chr2 135005463 135006809 -115681045 + ERVL LTR ERVL 3663 5123 -597 738 316 25 44 chr2 135007316 135007636 -115680218 + LTR16C LTR ERVL 159 472 -19 26 30 0 0 chr2 135007857 135007890 -115679964 + AT_rich Low_complexity Low_complexity 1 33 0 765 169 8 0 chr2 135007891 135008015 -115679839 + FLAM_C SINE Alu 2 126 -17 479 238 127 0 chr2 135009543 135009669 -115678185 + L1ME3 LINE L1 6020 6161 -1 227 232 98 37 chr2 135010329 135010411 -115677443 + MIR SINE MIR 67 153 -55 511 174 26 9 chr2 135010770 135010885 -115676969 - L1MD2 LINE L1 -10 6349 6233 183 308 0 0 chr2 135011010 135011049 -115676805 - MIR SINE MIR -140 68 30 235 325 119 24 chr2 135011292 135011418 -115676436 + MIR3 SINE MIR 21 158 -50 532 281 138 13 chr2 135011476 135011700 -115676154 - LTR16A LTR ERVL -5 445 194 407 252 69 8 chr2 135011852 135011983 -115675871 - MIR3 SINE MIR 0 208 70 3177 262 89 23 chr2 135012463 135013554 -115674300 - ERVL LTR ERVL -525 5239 4077 834 233 72 18 chr2 135013655 135013878 -115673976 - MER4D LTR ERV1 -662 241 7 1008 204 22 9 chr2 135013986 135014217 -115673637 + AluJo SINE Alu 64 297 -15 31 0 0 0 chr2 135014246 135014277 -115673577 + AT_rich Low_complexity Low_complexity 1 31 0 302 290 8 16 chr2 135014357 135014481 -115673373 - L1MD2 LINE L1 -1976 5832 5710 669 149 9 9 chr2 135014901 135015015 -115672839 + MLT1B LTR MaLR 272 385 -5 28 71 0 0 chr2 135015452 135015508 -115672346 + AT_rich Low_complexity Low_complexity 1 56 0 357 43 0 0 chr2 135015547 135015594 -115672260 + (TG)n Simple_repeat Simple_repeat 2 48 0 240 35 0 0 chr2 135015613 135015642 -115672212 + (TA)n Simple_repeat Simple_repeat 2 30 0 8727 80 2 1 chr2 135016003 135017193 -115670661 + L1P LINE L1 1981 3171 -2975 1550 129 16 23 chr2 135017797 135018053 -115669801 - AluSx SINE Alu -10 302 49 1110 205 70 31 chr2 135018055 135018382 -115669472 - Charlie4a DNA MER1_type -7 501 162 185 254 68 0 chr2 135019244 135019303 -115668551 + L2 LINE L2 3210 3272 0 744 225 52 16 chr2 135019692 135019883 -115667971 - MLT1D LTR MaLR -306 199 2 1182 222 24 104 chr2 135019885 135020308 -115667546 - MLT1D-int LTR MaLR -1 1370 982 2753 36 0 0 chr2 135020320 135020628 -115667226 - AluYa5 SINE Alu -3 308 1 537 150 18 53 chr2 135020714 135020827 -115667027 - AluSg/x SINE Alu -6 304 196 646 157 64 0 chr2 135021401 135021541 -115666313 - L1MB2 LINE L1 -23 6148 6000 570 210 27 54 chr2 135021604 135021790 -115666064 + MER112 DNA MER1_type 67 247 -13 1968 140 0 0 chr2 135021996 135022281 -115665573 + AluSq SINE Alu 1 285 -28 32 0 0 0 chr2 135022282 135022314 -115665540 + AT_rich Low_complexity Low_complexity 1 32 0 496 235 25 0 chr2 135022432 135022551 -115665303 + MIR SINE MIR 112 233 -29 567 211 76 90 chr2 135022704 135022927 -115664927 - MER58 DNA MER1_type -116 225 6 771 236 34 11 chr2 135023306 135023484 -115664370 + MER5A DNA MER1_type 1 182 -7 2048 262 16 47 chr2 135025631 135026041 -115661813 + L1M4 LINE L1 4481 4861 -1285 1573 206 28 0 chr2 135026041 135026328 -115661526 + AluJb SINE Alu 3 297 -15 2048 262 16 47 chr2 135026328 135026643 -115661211 + L1M4 LINE L1 4861 5184 -962 2027 245 63 33 chr2 135026743 135027917 -115659937 + ERVL LTR ERVL 2262 3510 -2254 651 202 8 0 chr2 135028828 135028952 -115658902 - FLAM_C SINE Alu -17 126 2 23 0 0 0 chr2 135028963 135028986 -115658868 + AT_rich Low_complexity Low_complexity 1 23 0 534 341 31 50 chr2 135029207 135029527 -115658327 - LTR16C LTR ERVL -19 472 159 297 257 176 7 chr2 135030111 135030259 -115657595 + MIR SINE MIR 67 239 -23 1517 172 14 17 chr2 135031396 135031693 -115656161 - AluY SINE Alu -13 298 3 1881 182 3 77 chr2 135031694 135032151 -115655703 - L1M3 LINE L1 -496 5687 5198 1634 202 65 16 chr2 135032151 135032523 -115655331 + MLT1B LTR MaLR 1 390 0 1881 182 3 77 chr2 135032523 135032669 -115655185 - L1M3 LINE L1 -985 5198 5143 2128 131 93 15 chr2 135032669 135033065 -115654789 + MSTA LTR MaLR 2 428 0 1881 182 3 77 chr2 135033065 135033099 -115654755 - L1M3 LINE L1 -1040 5143 5108 597 249 40 17 chr2 135033401 135033574 -115654280 + MLT1D LTR MaLR 1 177 -328 976 213 8 20 chr2 135033587 135033831 -115654023 - L1MC1 LINE L1 -17 6316 6076 219 220 0 0 chr2 135033989 135034039 -115653815 + (TG)n Simple_repeat Simple_repeat 1 50 0 748 124 92 0 chr2 135034069 135034222 -115653632 + L1MB2 LINE L1 6001 6167 -4 568 233 25 12 chr2 135036533 135036696 -115651158 + MIR SINE MIR 94 258 -4 403 204 32 0 chr2 135036732 135036825 -115651029 + L1MD2 LINE L1 6250 6345 -14 1547 225 3 0 chr2 135037325 135037632 -115650222 + AluJo SINE Alu 1 308 -4 2362 109 0 0 chr2 135037654 135037958 -115649896 + AluSc SINE Alu 1 304 -5 239 340 54 16 chr2 135039267 135039452 -115648402 + L2 LINE L2 2855 3046 -226 4537 265 47 24 chr2 135041348 135043058 -115644796 - ERVL LTR ERVL -2903 2861 1065 681 238 134 9 chr2 135043997 135044220 -115643634 + MIR SINE MIR 7 257 -5 456 179 32 0 chr2 135044256 135044351 -115643503 + L1MD2 LINE L1 6249 6346 -13 1897 171 3 0 chr2 135044850 135045155 -115642699 + AluJo SINE Alu 1 306 -6 467 259 68 141 chr2 135045277 135045717 -115642137 + L2 LINE L2 113 520 -2794 3495 206 49 48 chr2 135045741 135046591 -115641263 + MER21B LTR ERV1 12 862 -1 1920 296 94 15 chr2 135046594 135047462 -115640392 + L2 LINE L2 509 1445 -1869 439 349 6 0 chr2 135049614 135049789 -115638065 - MIR SINE MIR -45 217 42 1342 133 5 0 chr2 135049890 135050078 -115637776 + AluSg/x SINE Alu 88 276 -36 429 202 34 11 chr2 135050085 135050174 -115637680 - MER58 DNA MER1_type -2329 91 1 202 307 9 53 chr2 135050265 135050379 -115637475 - MIR SINE MIR -96 166 58 2208 99 3 7 chr2 135050412 135050695 -115637159 - AluSx SINE Alu -17 295 14 458 209 15 67 chr2 135050704 135050765 -115637089 - MIR SINE MIR -2 260 197 875 208 57 24 chr2 135050765 135050977 -115636877 + MER20 DNA MER1_type 1 219 0 458 209 15 67 chr2 135050977 135051049 -115636805 - MIR SINE MIR -65 197 134 375 246 78 77 chr2 135051155 135051415 -115636439 - MIR3 SINE MIR 0 262 5 222 214 157 0 chr2 135052255 135052325 -115635529 + MIR SINE MIR 182 262 0 549 250 49 0 chr2 135052515 135052659 -115635195 - MIR SINE MIR 0 262 112 2162 120 0 0 chr2 135052777 135053095 -115634759 - AluSq SINE Alu 0 313 1 651 215 31 36 chr2 135053288 135053483 -115634371 - MER112 DNA MER1_type 0 260 67 768 118 92 0 chr2 135053544 135053697 -115634157 + L1MB2 LINE L1 6001 6167 -4 180 0 0 0 chr2 135056423 135056443 -115631411 + (A)n Simple_repeat Simple_repeat 1 20 0 2345 79 0 13 chr2 135056443 135056794 -115631060 + AluY SINE Alu 1 311 0 362 331 41 6 chr2 135056801 135056970 -115630884 + MIR SINE MIR 45 219 -43 1565 228 65 0 chr2 135057270 135057735 -115630119 + MLT1E2 LTR MaLR 93 564 -62 245 161 0 0 chr2 135057812 135057860 -115629994 + MLT1E3 LTR MaLR 544 610 -2 679 218 0 0 chr2 135059786 135059919 -115627935 + MER96 DNA MER1_type? 9 141 -34 450 181 119 167 chr2 135060032 135060368 -115627486 + MLT1J LTR MaLR 32 351 -160 253 308 53 15 chr2 135060431 135060564 -115627290 - MIR SINE MIR -123 139 2 1426 180 27 91 chr2 135061821 135062273 -115625581 + MLT2D LTR ERVL 1 520 0 970 214 58 108 chr2 135062330 135062743 -115625111 + MER66A LTR ERV1 73 459 -19 1525 194 41 12 chr2 135062921 135063241 -115624613 + MLT1D LTR MaLR 1 329 -176 230 252 163 30 chr2 135063403 135063538 -115624316 + MLT1L LTR MaLR 460 612 -3 562 226 94 19 chr2 135065711 135065870 -115621984 + MIR SINE MIR 42 212 -50 1798 159 29 37 chr2 135066280 135066631 -115621223 + MER7A DNA MER2_type 1 346 0 562 191 13 59 chr2 135067490 135067642 -115620212 - MER5A DNA MER1_type -40 149 5 476 143 60 0 chr2 135068338 135068422 -115619432 - L1MA4A LINE L1 -22 6281 6193 24 0 0 0 chr2 135068618 135068642 -115619212 + AT_rich Low_complexity Low_complexity 1 24 0 252 81 108 0 chr2 135070332 135070369 -115617485 - MLT2F LTR ERVL 0 663 623 216 0 0 0 chr2 135070370 135070394 -115617460 + (CA)n Simple_repeat Simple_repeat 1 24 0 30 45 0 0 chr2 135070406 135070450 -115617404 + AT_rich Low_complexity Low_complexity 1 44 0 231 143 143 0 chr2 135070453 135070502 -115617352 + MLT2F LTR ERVL 565 620 -43 22 0 0 0 chr2 135070509 135070531 -115617323 + AT_rich Low_complexity Low_complexity 1 22 0 1481 258 77 26 chr2 135070604 135070894 -115616960 - MLT2F LTR ERVL -187 476 153 1604 185 17 3 chr2 135070894 135071181 -115616673 + AluJo SINE Alu 1 291 -21 1481 258 77 26 chr2 135071181 135071343 -115616511 - MLT2F LTR ERVL -510 153 1 10179 226 82 27 chr2 135071343 135074617 -115613237 - ERVL-F LTR ERVL -8 5756 2263 2153 151 0 0 chr2 135075106 135075418 -115612436 - AluSx SINE Alu 0 312 1 910 208 44 11 chr2 135077049 135077232 -115610622 - MER5A DNA MER1_type 0 189 1 1239 169 113 66 chr2 135077610 135077930 -115609924 + MER58B DNA MER1_type 6 340 -1 2057 115 0 24 chr2 135078194 135078489 -115609365 - AluSp SINE Alu -19 294 7 22 56 0 0 chr2 135079377 135079413 -115608441 + AT_rich Low_complexity Low_complexity 1 36 0 714 278 106 24 chr2 135079648 135080073 -115607781 - L1MC4a LINE L1 -1633 6175 5716 2251 91 11 0 chr2 135080357 135080644 -115607210 + AluSc SINE Alu 1 290 -19 900 191 0 25 chr2 135080693 135080855 -115606999 + AluJb SINE Alu 132 289 -23 26 0 0 0 chr2 135081085 135081111 -115606743 + AT_rich Low_complexity Low_complexity 1 26 0 214 173 74 37 chr2 135081624 135081705 -115606149 - L2 LINE L2 0 3313 3230 226 279 43 31 chr2 135082244 135082405 -115605449 + L1MEd LINE L1 3 165 -5954 * 660 263 63 41 chr2 135082404 135082885 -115604969 + L1MEd LINE L1 1023 1562 -4748 1772 94 16 23 chr2 135084006 135084262 -115603592 - AluSx SINE Alu -10 302 49 1410 192 89 21 chr2 135084264 135084644 -115603210 - Charlie4a DNA MER1_type -7 501 96 1772 94 16 23 chr2 135085175 135085431 -115602423 - AluSx SINE Alu -10 302 49 1587 174 89 21 chr2 135085433 135085813 -115602041 - Charlie4a DNA MER1_type -7 501 96 976 204 110 57 chr2 135086610 135086745 -115601109 - LTR50 LTR ERVL -1 794 668 1254 194 4 18 chr2 135086745 135086972 -115600882 + MER58A DNA MER1_type 1 224 0 976 204 110 57 chr2 135086972 135087154 -115600700 - LTR50 LTR ERVL -127 668 460 213 329 0 0 chr2 135087403 135087482 -115600372 + MER5B DNA MER1_type 52 130 -48 350 269 11 0 chr2 135087708 135087801 -115600053 + MER5B DNA MER1_type 85 178 0 335 259 179 42 chr2 135088615 135089024 -115598830 - L1ME4a LINE L1 0 6121 5657 235 235 106 53 chr2 135089040 135089172 -115598682 + L2 LINE L2 2919 3057 -215 2308 122 0 0 chr2 135089371 135089683 -115598171 - AluSx SINE Alu 0 312 1 829 118 6 39 chr2 135090008 135090186 -115597668 + (TTCC)n Simple_repeat Simple_repeat 1 172 0 1708 183 3 7 chr2 135090186 135090471 -115597383 - AluJb SINE Alu -28 284 1 286 207 0 0 chr2 135090480 135090538 -115597316 - L2 LINE L2 0 3313 3256 184 317 0 0 chr2 135090673 135090714 -115597140 - L2 LINE L2 -87 3185 3145 2782 130 16 5 chr2 135091077 135091515 -115596339 - MER65A LTR ERV1 0 445 3 274 156 0 0 chr2 135091752 135091797 -115596057 - L2 LINE L2 -223 3049 3005 2178 103 0 3 chr2 135092020 135092334 -115595520 + AluSg SINE Alu 1 313 0 1040 271 107 46 chr2 135092539 135092633 -115595221 - L1MC4 LINE L1 -2 8040 7953 1572 183 69 0 chr2 135092633 135092922 -115594932 - AluJo SINE Alu -3 309 1 1040 271 107 46 chr2 135092922 135093418 -115594436 - L1MC4 LINE L1 -89 7953 7414 * 2642 251 30 51 chr2 135093414 135093697 -115594157 - L1ME2 LINE L1 -12 6152 5864 2232 107 3 3 chr2 135093697 135093996 -115593858 - AluSq SINE Alu -14 299 1 2642 251 30 51 chr2 135093996 135094759 -115593095 - L1ME2 LINE L1 -300 5864 5130 248 275 58 0 chr2 135094774 135094843 -115593011 - L1ME2 LINE L1 -1124 5022 4950 262 379 108 21 chr2 135095331 135095764 -115592090 + L2 LINE L2 2194 2664 -650 2176 108 10 10 chr2 135095805 135096102 -115591752 + AluSx SINE Alu 1 297 -15 1970 155 10 0 chr2 135097204 135097508 -115590346 - AluJo SINE Alu -5 307 1 362 233 151 25 chr2 135097970 135098129 -115589725 - L1ME4a LINE L1 -16 6105 5927 1687 214 36 21 chr2 135098149 135098536 -115589318 + MSTD LTR MaLR 4 396 0 759 202 169 21 chr2 135098659 135098902 -115588952 + MER2 DNA MER2_type 67 345 0 348 167 17 3 chr2 135099139 135099214 -115588640 + AluS SINE Alu 5 62 -246 718 183 0 0 chr2 135099316 135099431 -115588423 - FLAM_C SINE Alu -28 115 1 485 254 95 37 chr2 135099530 135099825 -115588029 + HAL1b LINE L1 174 485 -863 22 0 0 0 chr2 135099963 135099985 -115587869 + AT_rich Low_complexity Low_complexity 1 22 0 294 239 87 0 chr2 135100015 135100107 -115587747 + HAL1b LINE L1 440 539 -809 234 325 8 0 chr2 135100333 135100456 -115587398 - L1M4 LINE L1 -2397 3749 3626 2220 103 17 7 chr2 135100485 135100787 -115587067 - AluSx SINE Alu -7 305 1 413 293 30 60 chr2 135100888 135101222 -115586632 - L1M4 LINE L1 -3376 2770 2447 964 261 32 27 chr2 135101584 135101960 -115585894 - L1MC4a LINE L1 -1862 6015 5638 725 283 28 7 chr2 135101962 135102252 -115585602 - L1MC4a LINE L1 -2382 3833 3538 856 258 89 0 chr2 135102366 135102591 -115585263 + MIR SINE MIR 12 256 -6 286 265 120 25 chr2 135102598 135102881 -115584973 - L1MC4a LINE L1 -4828 1568 1259 499 268 4 59 chr2 135102913 135103167 -115584687 - L1MC4a LINE L1 -4909 1296 1057 665 297 31 70 chr2 135103409 135103752 -115584102 - L1MC4a LINE L1 -4970 1235 929 1877 141 30 3 chr2 135103752 135104049 -115583805 - AluSx SINE Alu -7 305 1 665 297 31 70 chr2 135104049 135104381 -115583473 - L1MC4a LINE L1 -5276 929 586 340 281 89 20 chr2 135104455 135104601 -115583253 + HAL1b LINE L1 1172 1327 -21 387 329 11 17 chr2 135105099 135105331 -115582523 + CT-rich Low_complexity Low_complexity 1 230 0 265 288 50 0 chr2 135105477 135105557 -115582297 - L2 LINE L2 0 3272 3189 303 281 123 0 chr2 135106953 135107067 -115580787 - L1ME4a LINE L1 -2 6119 5992 1111 171 11 11 chr2 135107178 135107365 -115580489 + MER5A DNA MER1_type 3 189 0 326 248 29 29 chr2 135108384 135108521 -115579333 - L1ME4a LINE L1 -177 5944 5808 2289 112 3 0 chr2 135108758 135109061 -115578793 + AluSx SINE Alu 1 304 -8 3800 138 19 40 chr2 135109235 135109961 -115577893 + MER50 LTR ERV1 1 711 -23 472 258 48 11 chr2 135110307 135110493 -115577361 - L1ME4a LINE L1 -343 5778 5586 334 90 0 15 chr2 135111692 135111759 -115576095 - MER96B DNA MER1_type? -238 179 114 1362 194 63 61 chr2 135111780 135112209 -115575645 + MLT1C LTR MaLR 6 435 -32 2964 152 136 22 chr2 135112210 135112842 -115575012 + MER44D DNA MER2_type 2 705 0 425 187 55 0 chr2 135112889 135112980 -115574874 + MER96B DNA MER1_type? 322 417 0 315 315 48 7 chr2 135113160 135113433 -115574421 + L1ME4a LINE L1 5650 5933 -188 1357 225 46 41 chr2 135113562 135114084 -115573770 - MLT1E3 LTR MaLR -2 622 3 548 134 10 10 chr2 135114448 135114545 -115573309 + MSTB LTR MaLR 1 97 -329 * 713 69 50 0 chr2 135114544 135114645 -115573209 + MSTB LTR MaLR 264 369 -57 213 367 0 20 chr2 135114710 135114808 -115573046 - MIR SINE MIR -77 131 36 196 310 105 35 chr2 135114839 135115010 -115572844 - L2 LINE L2 -2 3311 3129 446 278 74 19 chr2 135115408 135115570 -115572284 + MER5B DNA MER1_type 8 178 0 2356 109 0 0 chr2 135116178 135116490 -115571364 - AluSq SINE Alu -1 312 1 228 286 50 31 chr2 135116595 135116756 -115571098 + L1MC4 LINE L1 7689 7852 -190 1502 206 60 67 chr2 135116861 135117279 -115570575 - MER21B LTR ERV1 -437 426 12 720 246 66 139 chr2 135117303 135117743 -115570111 - L2 LINE L2 -2794 520 113 3160 120 117 0 chr2 135117798 135118363 -115569491 + LTR24C LTR ERV1 5 635 0 1012 177 15 92 chr2 135118380 135118640 -115569214 - LOR1b LTR ERV1 0 461 222 356 115 0 16 chr2 135118659 135118720 -115569134 - LOR1a LTR ERV1 -437 60 1 605 258 92 32 chr2 135118955 135119269 -115568585 + MER46C DNA MER2_type 2 334 -4 1506 206 15 57 chr2 135119548 135120004 -115567850 - LTR56 LTR ERV1 0 445 9 243 246 16 0 chr2 135121133 135121194 -115566660 + MLT1F LTR MaLR 21 82 -460 291 238 119 0 chr2 135121439 135121540 -115566314 + MLT1L LTR MaLR 503 615 0 2319 119 16 24 chr2 135121541 135121919 -115565935 - THE1C LTR MaLR 0 375 1 2087 117 14 25 chr2 135122197 135122556 -115565298 - THE1C LTR MaLR -20 355 1 182 261 108 15 chr2 135124191 135124256 -115563598 - L2 LINE L2 -48 3265 3195 809 171 57 11 chr2 135124300 135124475 -115563379 + MER58A DNA MER1_type 42 224 0 3871 188 26 11 chr2 135124476 135126012 -115561842 - L1MB7 LINE L1 -65 6119 4557 183 42 0 0 chr2 135128046 135128070 -115559784 + (GA)n Simple_repeat Simple_repeat 1 24 0 1101 237 92 59 chr2 135128844 135129367 -115558487 + MLT1F1 LTR MaLR 2 566 -1 653 312 105 36 chr2 135130593 135130984 -115556870 + MLT1K LTR MaLR 13 430 -158 387 0 0 0 chr2 135130997 135131040 -115556814 + (CA)n Simple_repeat Simple_repeat 2 44 0 275 265 0 0 chr2 135131089 135131157 -115556697 + MLT1K LTR MaLR 516 583 -5 1405 220 60 12 chr2 135131159 135131609 -115556245 + LTR40c LTR ERVL 1 519 0 526 268 170 27 chr2 135131643 135131867 -115555987 + MIR SINE MIR 3 258 -4 21 0 0 0 chr2 135131900 135131921 -115555933 + AT_rich Low_complexity Low_complexity 1 21 0 267 168 104 56 chr2 135131925 135132050 -115555804 - L1ME4a LINE L1 -4 6117 5987 234 0 0 0 chr2 135132064 135132090 -115555764 + (TG)n Simple_repeat Simple_repeat 2 27 0 231 336 15 0 chr2 135132516 135132647 -115555207 - L1ME4a LINE L1 -1911 5897 5765 802 281 80 4 chr2 135133049 135133413 -115554441 + L1MC4a LINE L1 5506 5809 -312 276 30 0 0 chr2 135133425 135133458 -115554396 + (TG)n Simple_repeat Simple_repeat 1 33 0 4640 51 0 0 chr2 135133578 135134150 -115553704 - L1PA4 LINE L1 -1 6154 5583 910 284 21 8 chr2 135134559 135134798 -115553056 - MIR SINE MIR -18 244 3 1202 168 63 23 chr2 135135620 135135805 -115552049 + MER33 DNA MER1_type 1 199 -2386 4486 161 44 85 chr2 135135805 135136237 -115551617 - Tigger6a DNA MER2_type -515 1082 634 1769 182 0 19 chr2 135136237 135136550 -115551304 - AluJo SINE Alu -5 307 1 4486 161 44 85 chr2 135136550 135137245 -115550609 - Tigger6a DNA MER2_type -963 634 1 1202 168 63 23 chr2 135137245 135137377 -115550477 + MER33 DNA MER1_type 199 324 0 564 350 60 29 chr2 135137671 135138054 -115549800 + L1ME LINE L1 5335 5729 -392 969 280 9 9 chr2 135138096 135138432 -115549422 + L1M4 LINE L1 2650 2985 -3161 322 245 10 0 chr2 135138440 135138542 -115549312 + L1ME3A LINE L1 1861 1963 -4577 2552 277 79 22 chr2 135138545 135141524 -115546330 + L1ME3A LINE L1 3380 6559 -5 383 0 0 21 chr2 135141550 135141598 -115546256 + (TG)n Simple_repeat Simple_repeat 2 48 0 319 229 0 12 chr2 135141771 135141854 -115546000 - MIR SINE MIR -65 197 116 1672 98 0 0 chr2 135141882 135142096 -115545758 - AluSg/x SINE Alu -1 309 96 372 138 31 0 chr2 135142194 135142259 -115545595 + MLT1A1 LTR MaLR 1 67 -298 592 105 0 0 chr2 135142260 135142346 -115545508 - AluSg SINE Alu -9 303 218 1207 125 0 0 chr2 135142346 135142506 -115545348 - AluSg SINE Alu -150 160 1 990 204 46 102 chr2 135142506 135142830 -115545024 + MLT1A1 LTR MaLR 60 365 0 305 281 124 26 chr2 135142858 135143011 -115544843 - MIR SINE MIR -75 187 20 3790 113 18 2 chr2 135143168 135143736 -115544118 - L1PA16 LINE L1 -4 6162 5586 215 288 102 0 chr2 135143867 135143926 -115543928 + L2 LINE L2 3199 3263 -50 557 304 115 16 chr2 135144591 135144844 -115543010 + L3 LINE CR1 527 804 -773 568 370 27 3 chr2 135145571 135145871 -115541983 + L3 LINE CR1 1197 1503 -74 236 301 58 39 chr2 135145877 135145980 -115541874 - MIR SINE MIR -2 260 156 2127 75 0 4 chr2 135146139 135146407 -115541447 - AluY SINE Alu -8 303 37 3493 112 14 5 chr2 135146434 135146736 -115541118 - L1MA4A LINE L1 -4 6299 5988 423 0 0 0 chr2 135146736 135146783 -115541071 + (CA)n Simple_repeat Simple_repeat 2 48 0 3493 112 14 5 chr2 135146783 135147032 -115540822 - L1MA4A LINE L1 -315 5988 5743 1445 207 74 72 chr2 135148690 135149193 -115538661 - MLT1D LTR MaLR 0 505 2 500 361 142 12 chr2 135149193 135149517 -115538337 - HAL1 LINE L1 -1917 590 224 202 288 34 17 chr2 135149729 135149788 -115538066 - MIR SINE MIR -157 105 46 7077 128 12 4 chr2 135150465 135151203 -115536651 + L1MC1 LINE L1 5186 5939 -394 1529 210 119 36 chr2 135151203 135151589 -115536265 - MER47B DNA MER2_type 0 418 1 7077 128 12 4 chr2 135151589 135151988 -115535866 + L1MC1 LINE L1 5939 6333 0 2284 94 0 16 chr2 135152154 135152462 -115535392 - AluSx SINE Alu -9 303 1 180 321 6 93 chr2 135152813 135152975 -115534879 + MIR SINE MIR 77 224 -38 261 341 78 8 chr2 135153099 135153228 -115534626 - MIR3 SINE MIR -6 202 65 403 350 7 0 chr2 135153363 135153503 -115534351 - MIR SINE MIR -64 198 58 698 239 40 80 chr2 135153736 135153987 -115533867 + MIR SINE MIR 22 262 0 291 281 0 0 chr2 135153990 135154054 -115533800 + L2 LINE L2 3193 3256 -16 277 297 0 0 chr2 135154073 135154137 -115533717 + L2 LINE L2 3193 3256 -16 267 275 0 29 chr2 135154148 135154217 -115533637 + L2 LINE L2 3190 3256 -16 312 310 124 0 chr2 135154238 135154367 -115533487 + MIR SINE MIR 100 244 -18 255 278 153 28 chr2 135154706 135154850 -115533004 + MIR SINE MIR 29 190 -72 367 235 0 41 chr2 135155623 135155721 -115532133 - MIR SINE MIR -10 252 159 2161 132 23 20 chr2 135155999 135156341 -115531513 - MER61A LTR ERV1 0 343 1 568 308 0 22 chr2 135156365 135156589 -115531265 - L1M4 LINE L1 -2669 3477 3259 213 39 0 0 chr2 135156591 135156617 -115531237 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 43799 33 23 1 chr2 135156618 135162642 -115525212 - L1PA2 LINE L1 0 6155 1 345 130 93 46 chr2 135162625 135162733 -115525121 - L1M4 LINE L1 -2874 3272 3160 * 191 377 0 0 chr2 135163141 135163194 -115524660 + L2 LINE L2 3002 3054 -259 2126 173 60 14 chr2 135163197 135163947 -115523907 - LTR1B LTR ERV1 -2 824 1 1446 162 20 20 chr2 135164525 135164778 -115523076 - AluJo SINE Alu -16 296 44 233 244 0 0 chr2 135165062 135165107 -115522747 + MER3 DNA MER1_type 46 90 -119 * 565 198 259 6 chr2 135165069 135165231 -115522623 - MER3 DNA MER1_type -5 204 2 343 221 52 81 chr2 135165327 135165420 -115522434 - MIR SINE MIR -27 235 146 1923 172 30 57 chr2 135165420 135165647 -115522207 - MLT1B LTR MaLR 0 390 177 2220 72 7 0 chr2 135165647 135165923 -115521931 - AluY SINE Alu -14 297 20 1923 172 30 57 chr2 135165923 135166096 -115521758 - MLT1B LTR MaLR -213 177 1 343 221 52 81 chr2 135166096 135166138 -115521716 - MIR SINE MIR -116 146 104 726 173 46 81 chr2 135166870 135167067 -115520787 + LTR18B LTR ERVL 1 190 -424 * 1068 151 261 13 chr2 135167065 135167303 -115520551 + LTR18B LTR ERVL 317 613 -1 1903 133 61 0 chr2 135167686 135167980 -115519874 + AluSq SINE Alu 1 312 -1 1430 204 14 7 chr2 135168063 135168343 -115519511 + AluJo SINE Alu 1 282 -30 2396 97 0 3 chr2 135168645 135168956 -115518898 + AluSq SINE Alu 1 310 -3 528 250 189 0 chr2 135170791 135170939 -115516915 - MER45A DNA AcHobo 0 178 3 264 100 0 0 chr2 135171012 135171052 -115516802 + (TC)n Simple_repeat Simple_repeat 1 40 0 * 320 167 0 0 chr2 135171045 135171123 -115516731 + C-rich Low_complexity Low_complexity 1 78 0 198 156 0 0 chr2 135171154 135171199 -115516655 + A-rich Low_complexity Low_complexity 1 45 0 1897 196 108 15 chr2 135171872 135172845 -115515009 - L1M1 LINE L1 -640 6725 5578 * 4824 189 60 76 chr2 135172842 135174268 -115513586 - L1M1 LINE L1 -5806 1403 1 274 315 143 55 chr2 135174312 135174585 -115513269 - L2 LINE L2 -8 3264 2968 4476 94 2 0 chr2 135174642 135175195 -115512659 + MER41A LTR ERV1 1 554 0 394 360 91 15 chr2 135175213 135175555 -115512299 - L2 LINE L2 -925 2389 2022 193 391 0 0 chr2 135175770 135175857 -115511997 - MIR SINE MIR -61 147 61 458 296 18 31 chr2 135176893 135177288 -115510566 + CT-rich Low_complexity Low_complexity 1 389 0 452 267 12 52 chr2 135177333 135177906 -115509948 + CT-rich Low_complexity Low_complexity 1 550 0 294 300 25 31 chr2 135177978 135178138 -115509716 + CT-rich Low_complexity Low_complexity 1 159 0 352 315 6 43 chr2 135178270 135178544 -115509310 + CT-rich Low_complexity Low_complexity 1 263 0 250 309 0 58 chr2 135178519 135178707 -115509147 + T-rich Low_complexity Low_complexity 3 179 0 * 234 0 0 0 chr2 135178752 135178778 -115509076 + (TTC)n Simple_repeat Simple_repeat 2 27 0 4906 24 0 0 chr2 135178782 135179315 -115508539 - L1PA4 LINE L1 -8 6147 5615 235 182 26 13 chr2 135179436 135179513 -115508341 + T-rich Low_complexity Low_complexity 2 79 0 284 306 5 43 chr2 135179518 135179704 -115508150 + CT-rich Low_complexity Low_complexity 1 179 0 1650 130 40 86 chr2 135180135 135180436 -115507418 - AluSx SINE Alu -24 288 2 326 272 26 61 chr2 135180447 135180561 -115507293 + L2 LINE L2 3163 3272 0 233 292 150 33 chr2 135180902 135181022 -115506832 - L2 LINE L2 0 3272 3139 310 257 59 137 chr2 135181064 135181371 -115506483 - L2 LINE L2 -10 3262 2980 3305 65 22 10 chr2 135181513 135181775 -115506079 - L1P3 LINE L1 -735 5437 5168 183 42 0 0 chr2 135181775 135181799 -115506055 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3305 65 22 10 chr2 135181799 135182046 -115505808 - L1P3 LINE L1 -1004 5168 4926 6027 52 11 0 chr2 135182046 135182730 -115505124 + L1PA7 LINE L1 5448 6154 0 25 80 0 30 chr2 135182856 135182956 -115504898 + AT_rich Low_complexity Low_complexity 1 97 0 180 0 0 0 chr2 135183230 135183250 -115504604 + (T)n Simple_repeat Simple_repeat 1 20 0 463 312 84 5 chr2 135184953 135185155 -115502699 + MIR SINE MIR 34 251 -11 2297 153 31 3 chr2 135185194 135185546 -115502308 + THE1B LTR MaLR 3 364 0 2820 91 8 0 chr2 135185978 135186330 -115501524 + THE1A LTR MaLR 1 355 0 9641 88 2 2 chr2 135186330 135187585 -115500269 + THE1A-int LTR MaLR 1 1256 -324 1230 84 0 89 chr2 135187685 135187875 -115499979 + THE1A LTR MaLR 183 355 0 1131 218 18 0 chr2 135188152 135188372 -115499482 - MER58A DNA MER1_type 0 224 1 200 294 0 0 chr2 135188374 135188425 -115499429 - L2 LINE L2 -695 2619 2569 955 120 0 0 chr2 135188857 135188982 -115498872 + FLAM_C SINE Alu 1 125 -18 545 304 110 41 chr2 135189088 135189546 -115498308 + L1ME LINE L1 5266 5758 -363 1660 206 46 41 chr2 135189565 135189934 -115497920 + MLT2D LTR ERVL 41 411 -3 250 330 66 50 chr2 135190553 135190735 -115497119 - MIR SINE MIR -56 206 22 204 262 41 138 chr2 135190775 135190920 -115496934 - L2 LINE L2 -8 3264 3134 425 233 59 45 chr2 135191235 135191441 -115496413 - LTR33 LTR ERVL 0 521 237 435 269 67 0 chr2 135191472 135191621 -115496233 - LTR33 LTR ERVL -358 163 5 350 304 130 59 chr2 135191626 135192018 -115495836 + L2 LINE L2 2553 2972 -342 371 231 7 28 chr2 135192047 135192190 -115495664 + CT-rich Low_complexity Low_complexity 3 142 0 2757 244 97 20 chr2 135192228 135193224 -115494630 - L1ME3 LINE L1 -10 6152 5082 555 274 69 10 chr2 135193690 135193894 -115493960 + LTR16A LTR ERVL 224 439 -11 183 295 0 0 chr2 135194203 135194281 -115493573 + (TA)n Simple_repeat Simple_repeat 1 78 0 562 242 105 39 chr2 135194298 135194451 -115493403 - MER115 DNA AcHobo -92 601 439 237 335 104 24 chr2 135194591 135194755 -115493099 + L2 LINE L2 3087 3263 -9 433 184 117 39 chr2 135194877 135194980 -115492874 - MER81 DNA DNA 0 114 4 274 190 35 0 chr2 135195723 135195781 -115492073 - MLT1L LTR MaLR -379 236 177 234 143 0 0 chr2 135195764 135195799 -115492055 - MLT1J2 LTR MaLR -318 132 98 * 240 305 0 0 chr2 135195881 135195940 -115491914 - MLT1J LTR MaLR -341 170 112 21 0 0 0 chr2 135196569 135196590 -115491264 + AT_rich Low_complexity Low_complexity 1 21 0 288 0 0 0 chr2 135196765 135196797 -115491057 + (CA)n Simple_repeat Simple_repeat 2 33 0 260 299 87 49 chr2 135197246 135197430 -115490424 - MIR SINE MIR -60 148 6 3062 236 56 103 chr2 135197870 135198961 -115488893 + L1ME LINE L1 3561 4702 -1460 240 35 0 0 chr2 135198961 135198990 -115488864 + (TG)n Simple_repeat Simple_repeat 2 30 0 3062 236 56 103 chr2 135198990 135199139 -115488715 + L1ME LINE L1 4702 4856 -1306 3061 103 17 46 chr2 135199139 135199615 -115488239 + L1PB1 LINE L1 5690 6151 0 3062 236 56 103 chr2 135199615 135200357 -115487497 + L1ME LINE L1 4856 5439 -723 2098 123 0 20 chr2 135200357 135200657 -115487197 - AluSg SINE Alu -16 294 1 3062 236 56 103 chr2 135200657 135200734 -115487120 + L1ME LINE L1 5439 5518 -644 1147 206 28 16 chr2 135200731 135200978 -115486876 + L1M4 LINE L1 3902 4151 -1995 * 1738 167 27 49 chr2 135200978 135201343 -115486511 - L1M4 LINE L1 -511 5673 5317 3508 106 66 44 chr2 135201343 135201745 -115486109 - LTR8 LTR ERV1 -104 587 167 1850 163 3 0 chr2 135201745 135202033 -115485821 - AluSx SINE Alu -23 289 1 3508 106 66 44 chr2 135202033 135202204 -115485650 - LTR8 LTR ERV1 -524 167 1 24652 125 31 49 chr2 135202204 135204190 -115483664 - HUERS-P1 LTR ERV1 0 6263 4242 492 18 0 0 chr2 135204190 135204247 -115483607 + (TG)n Simple_repeat Simple_repeat 2 58 0 24652 125 31 49 chr2 135204247 135207172 -115480682 - HUERS-P1 LTR ERV1 -2021 4242 11 2070 136 0 0 chr2 135208653 135208940 -115478914 + AluSx SINE Alu 1 287 -25 249 189 11 111 chr2 135209144 135209234 -115478620 + MIR SINE MIR 111 191 -71 222 260 0 40 chr2 135209409 135209459 -115478395 - L2 LINE L2 -12 3301 3254 195 296 246 32 chr2 135210564 135210848 -115477006 + L2 LINE L2 2924 3268 -4 340 160 53 0 chr2 135210976 135211051 -115476803 - L1MB4 LINE L1 0 6180 6102 225 313 45 18 chr2 135211987 135212099 -115475755 + MIR SINE MIR 23 137 -125 530 93 13 0 chr2 135212099 135212174 -115475680 + MADE1 DNA Mariner 1 76 -4 342 229 133 0 chr2 135214142 135214247 -115473607 + L2 LINE L2 3195 3313 0 232 254 18 0 chr2 135214274 135214329 -115473525 - L1MB4 LINE L1 -1885 5923 5868 402 247 41 62 chr2 135214356 135214550 -115473304 - L1MC4a LINE L1 -1983 5825 5636 2089 120 0 3 chr2 135214550 135214856 -115472998 + AluSx SINE Alu 1 305 0 609 300 42 80 chr2 135215009 135215346 -115472508 + L2 LINE L2 2949 3272 0 1838 196 74 85 chr2 135215921 135216461 -115471393 - MLT1F1 LTR MaLR 0 567 3 561 274 106 40 chr2 135217003 135217229 -115470625 + MIR SINE MIR 12 252 -10 334 271 108 16 chr2 135217580 135217709 -115470145 + MIR SINE MIR 28 168 -94 526 246 40 16 chr2 135217715 135217841 -115470013 + MIR SINE MIR 3 131 -131 362 277 52 32 chr2 135218161 135218316 -115469538 + MIR SINE MIR 92 249 -13 198 328 172 41 chr2 135219110 135219424 -115468430 - L2 LINE L2 -5 3267 2913 243 212 106 0 chr2 135219614 135219680 -115468174 - L1MC5 LINE L1 -60 7901 7829 2305 228 108 62 chr2 135219723 135220754 -115467100 - L1MC5 LINE L1 -211 7750 6673 183 341 23 53 chr2 135220959 135221091 -115466763 + L2 LINE L2 2851 2978 -294 306 149 0 0 chr2 135221114 135221161 -115466693 + L1MC5 LINE L1 6743 6789 -1172 262 188 0 21 chr2 135221334 135221382 -115466472 + L2 LINE L2 3221 3267 -5 218 306 65 73 chr2 135221470 135221594 -115466260 + L2 LINE L2 3146 3268 -4 204 40 0 0 chr2 135222295 135222320 -115465534 + (TG)n Simple_repeat Simple_repeat 2 26 0 371 294 11 67 chr2 135222359 135222539 -115465315 + MIR3 SINE MIR 32 201 -7 7637 50 22 6 chr2 135222631 135223564 -115464290 - L1PA7 LINE L1 0 6154 5218 2005 100 4 0 chr2 135226245 135226525 -115461329 - L1MA4 LINE L1 -5 6295 6015 1115 125 0 0 chr2 135226529 135226681 -115461173 - AluSc SINE Alu -26 283 132 1842 116 25 25 chr2 135226681 135226956 -115460898 - AluSg SINE Alu -12 298 24 1058 209 62 5 chr2 135227976 135228186 -115459668 + MER58A DNA MER1_type 2 223 -1 525 225 92 79 chr2 135228227 135228454 -115459400 + L2 LINE L2 3084 3313 0 3712 178 77 72 chr2 135229325 135230384 -115457470 + L1MC5 LINE L1 6838 7901 -60 22 0 0 0 chr2 135230396 135230418 -115457436 + AT_rich Low_complexity Low_complexity 1 22 0 2249 152 32 16 chr2 135230818 135231187 -115456667 + THE1C LTR MaLR 1 375 0 216 228 0 0 chr2 135232572 135232629 -115455225 + (TG)n Simple_repeat Simple_repeat 2 58 0 1937 192 6 12 chr2 135232956 135233254 -115454600 + MLT1A1 LTR MaLR 34 331 -34 1193 174 58 9 chr2 135233254 135233478 -115454376 - MER46A DNA MER2_type 0 236 2 1937 192 6 12 chr2 135233478 135233513 -115454341 + MLT1A1 LTR MaLR 331 365 0 320 339 42 6 chr2 135233911 135234079 -115453775 - MIR SINE MIR -81 181 8 710 256 97 0 chr2 135234530 135234725 -115453129 + MIR SINE MIR 34 247 -15 832 141 16 0 chr2 135234806 135234934 -115452920 - AluSg/x SINE Alu -8 304 175 1113 282 104 16 chr2 135235019 135235526 -115452328 - L1MC/D LINE L1 -1998 5810 5259 729 189 94 16 chr2 135235960 135236001 -115451853 + MER3 DNA MER1_type 4 40 -169 1351 179 4 21 chr2 135236001 135236241 -115451613 + MER46A DNA MER2_type 1 236 0 729 189 94 16 chr2 135236241 135236390 -115451464 + MER3 DNA MER1_type 40 209 0 435 305 105 20 chr2 135237935 135238135 -115449719 - MIR SINE MIR -26 236 20 571 214 138 44 chr2 135238153 135238312 -115449542 + MER5A DNA MER1_type 9 182 -7 6171 136 83 7 chr2 135238797 135239825 -115448029 - HUERS-P1 LTR ERV1 -5157 1106 1 972 107 43 0 chr2 135239825 135239965 -115447889 - LTR8 LTR ERV1 0 691 546 1378 180 35 21 chr2 135239966 135240305 -115447549 - L1M4 LINE L1 -840 5306 4963 * 1495 197 108 89 chr2 135240303 135240979 -115446875 - L1M4 LINE L1 -2256 3890 3202 415 299 98 10 chr2 135240980 135241174 -115446680 - MLT1L LTR MaLR -52 563 353 409 274 23 57 chr2 135241365 135241540 -115446314 + HAL1b LINE L1 875 1043 -305 204 390 117 7 chr2 135242359 135242633 -115445221 - L2 LINE L2 -461 2853 2550 245 290 57 57 chr2 135242945 135243069 -115444785 - L2 LINE L2 -1218 2096 1973 6034 62 7 8 chr2 135243081 135243818 -115444036 + L1PA7 LINE L1 5418 6153 -1 291 252 24 0 chr2 135243827 135243954 -115443900 + GA-rich Low_complexity Low_complexity 3 132 0 590 215 33 8 chr2 135245650 135245771 -115442083 + MLT1I LTR MaLR 15 138 -271 903 221 49 25 chr2 135245771 135245975 -115441879 + AluJo SINE Alu 1 209 -103 233 234 0 0 chr2 135246026 135246073 -115441781 + MLT1I LTR MaLR 135 181 -228 822 246 251 0 chr2 135246633 135247023 -115440831 + MLT1D LTR MaLR 14 501 -4 657 282 79 13 chr2 135247543 135247770 -115440084 - MIR SINE MIR 0 262 21 364 260 32 24 chr2 135248644 135248767 -115439087 + MER5C DNA MER1_type 1 124 -200 201 258 121 0 chr2 135248889 135248955 -115438899 + MER5C DNA MER1_type 249 322 -2 240 238 171 29 chr2 135249075 135249180 -115438674 + MIR SINE MIR 65 184 -78 876 108 8 0 chr2 135249503 135249623 -115438231 + FLAM_C SINE Alu 1 121 -22 371 241 48 76 chr2 135249980 135250125 -115437729 - L2 LINE L2 -6 3307 3167 2073 195 66 19 chr2 135250217 135250700 -115437154 + Charlie4a DNA MER1_type 1 506 -2 1564 214 98 4 chr2 135251330 135251748 -115436106 - MER89 LTR ERV1 0 559 1 207 311 0 0 chr2 135252005 135252050 -115435804 + L2 LINE L2 3208 3252 -20 1103 174 14 28 chr2 135252127 135252339 -115435515 + MER20 DNA MER1_type 1 209 -10 224 291 82 55 chr2 135252395 135252505 -115435349 + MIR SINE MIR 2 114 -148 225 233 0 17 chr2 135253401 135253461 -115434393 + MIR SINE MIR 201 259 -3 223 289 175 0 chr2 135254353 135254519 -115433335 + L2 LINE L2 2848 3042 -271 692 209 7 27 chr2 135254555 135254703 -115433151 + AluJb SINE Alu 156 300 -12 517 243 92 24 chr2 135254711 135254917 -115432937 + L2 LINE L2 3093 3312 -1 2010 186 78 28 chr2 135255071 135255533 -115432321 + LTR2B LTR ERV1 6 490 0 2563 182 38 36 chr2 135255533 135256461 -115431393 + Harlequin LTR ERV1 1 885 -6355 3115 74 26 96 chr2 135256514 135257137 -115430717 + Harlequin LTR ERV1 842 1420 -5476 * 16564 55 11 6 chr2 135257125 135259168 -115428686 + Harlequin LTR ERV1 1807 3859 -3037 769 71 0 0 chr2 135259164 135259262 -115428592 + Harlequin LTR ERV1 6796 6893 -3 * 1868 200 67 36 chr2 135259284 135259729 -115428125 + LTR2B LTR ERV1 32 490 0 310 255 34 20 chr2 135260408 135260506 -115427348 + MER5A DNA MER1_type 39 148 -41 382 297 88 23 chr2 135261323 135261586 -115426268 + L2 LINE L2 2950 3229 -84 1666 163 24 27 chr2 135262852 135263147 -115424707 + AluJb SINE Alu 6 299 -13 329 260 102 0 chr2 135263159 135263293 -115424561 + MIR SINE MIR 41 186 -63 704 204 70 6 chr2 135263766 135263923 -115423931 - MLT1D LTR MaLR -2 503 337 490 194 0 11 chr2 135263960 135264053 -115423801 - MLT1D LTR MaLR -503 151 60 353 339 0 16 chr2 135265878 135266002 -115421852 - MIR SINE MIR -90 172 51 3262 134 24 14 chr2 135266249 135266311 -115421543 - L1MA8 LINE L1 -85 6206 6146 1110 205 47 94 chr2 135266311 135266692 -115421162 - MLT1A1 LTR MaLR -2 363 1 3262 134 24 14 chr2 135266692 135267042 -115420812 - L1MA8 LINE L1 -145 6146 5785 408 40 0 0 chr2 135267042 135267092 -115420762 + (TG)n Simple_repeat Simple_repeat 2 51 0 3262 134 24 14 chr2 135267092 135267229 -115420625 - L1MA8 LINE L1 -506 5785 5651 1165 300 113 61 chr2 135267655 135269185 -115418669 + L1MCc LINE L1 14 1642 -4905 1263 255 62 83 chr2 135269300 135269817 -115418037 + L1MCc LINE L1 2037 2563 -4378 279 0 0 0 chr2 135269817 135269848 -115418006 + (CA)n Simple_repeat Simple_repeat 2 32 0 1263 255 62 83 chr2 135269848 135270907 -115416947 + L1MCc LINE L1 2563 3622 -3319 787 194 61 41 chr2 135270916 135271112 -115416742 + MER3 DNA MER1_type 9 208 -1 311 274 73 59 chr2 135270948 135271152 -115416702 - MER3 DNA MER1_type 0 209 3 * 192 179 0 0 chr2 135271204 135271243 -115416611 + (TA)n Simple_repeat Simple_repeat 1 39 0 294 185 31 0 chr2 135271310 135271375 -115416479 + L1MCc LINE L1 3619 3685 -3256 276 154 0 0 chr2 135271391 135271443 -115416411 + (TA)n Simple_repeat Simple_repeat 1 52 0 835 220 20 0 chr2 135271446 135271646 -115416208 + L1MCc LINE L1 3700 3903 -3038 420 195 39 0 chr2 135271749 135271903 -115415951 + CT-rich Low_complexity Low_complexity 1 160 0 252 143 11 176 chr2 135271964 135272055 -115415799 - L1ME LINE L1 -636 5528 5453 2110 155 6 18 chr2 135272832 135273173 -115414681 - MER1B DNA MER1_type 0 337 1 590 203 28 11 chr2 135273336 135273513 -115414341 + CT-rich Low_complexity Low_complexity 1 180 0 27 0 0 0 chr2 135273765 135273792 -115414062 + AT_rich Low_complexity Low_complexity 1 27 0 656 253 42 16 chr2 135274806 135274996 -115412858 - MIR SINE MIR 0 262 68 626 155 29 8 chr2 135275704 135275827 -115412027 - MER5A DNA MER1_type -51 127 1 1651 152 0 30 chr2 135276436 135276699 -115411155 - AluJo SINE Alu -57 255 1 726 146 27 0 chr2 135276780 135276890 -115410964 - THE1B LTR MaLR 0 364 252 7550 85 4 0 chr2 135276890 135277856 -115409998 - THE1B-int LTR MaLR -610 970 1 2183 135 42 17 chr2 135277856 135278211 -115409643 - THE1B LTR MaLR 0 364 1 552 257 73 29 chr2 135278243 135278449 -115409405 + MIR SINE MIR 29 243 -19 319 235 140 5 chr2 135279233 135279386 -115408468 + MLT1I LTR MaLR 269 401 -8 25 0 0 0 chr2 135279592 135279617 -115408237 + AT_rich Low_complexity Low_complexity 1 25 0 277 223 60 161 chr2 135279767 135280134 -115407720 - MLT1K LTR MaLR -6 582 253 635 239 0 8 chr2 135280262 135280392 -115407462 + FLAM_C SINE Alu 1 129 -4 411 38 0 0 chr2 135281300 135281353 -115406501 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 2441 60 0 0 chr2 135281353 135281638 -115406216 - AluY SINE Alu -26 285 1 297 89 0 0 chr2 135282072 135282117 -115405737 + (CAAA)n Simple_repeat Simple_repeat 1 45 0 221 313 0 90 chr2 135282158 135282292 -115405562 + L2 LINE L2 2970 3091 -181 797 250 53 0 chr2 135282395 135282623 -115405231 - MIR SINE MIR -21 241 2 193 234 138 21 chr2 135282631 135282725 -115405129 + L2 LINE L2 3208 3312 -1 183 42 0 0 chr2 135283351 135283375 -115404479 + (CAA)n Simple_repeat Simple_repeat 1 24 0 180 310 0 0 chr2 135284033 135284091 -115403763 - MIR SINE MIR -31 231 174 881 252 31 67 chr2 135284330 135284747 -115403107 - MLT1J LTR MaLR 0 511 110 253 222 22 0 chr2 135284709 135284754 -115403100 - LTR67 LTR ERVL -405 152 107 * 262 277 151 0 chr2 135285494 135285613 -115402241 - MIR SINE MIR -47 215 79 523 201 136 11 chr2 135286935 135287095 -115400759 + MER5A DNA MER1_type 4 186 -3 1978 218 51 31 chr2 135288659 135288679 -115399175 + MER74A LTR ERVL 1 19 -539 1743 174 24 7 chr2 135288679 135288973 -115398881 + AluJb SINE Alu 1 299 -13 1978 218 51 31 chr2 135288973 135289497 -115398357 + MER74A LTR ERVL 19 556 -2 264 329 34 40 chr2 135289758 135289907 -115397947 - L1MC/D LINE L1 -2152 5656 5509 1399 135 31 22 chr2 135290488 135290740 -115397114 - AluSx SINE Alu 0 307 54 23 0 0 0 chr2 135290779 135290802 -115397052 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 135290853 135290876 -115396978 + AT_rich Low_complexity Low_complexity 1 23 0 535 304 69 23 chr2 135291008 135291314 -115396540 - L1ME LINE L1 -350 5771 5452 538 262 24 12 chr2 135291419 135291583 -115396271 + MIR SINE MIR 84 249 -13 683 224 0 7 chr2 135291888 135292035 -115395819 + MIR SINE MIR 91 236 -26 1471 198 72 31 chr2 135293955 135294248 -115393606 - AluJo SINE Alu -7 305 1 395 139 0 28 chr2 135294270 135294342 -115393512 - HsTC2 DNA Tc2 -1824 74 5 269 318 64 0 chr2 135294365 135294475 -115393379 - MER103 DNA DNA -47 119 3 899 266 86 4 chr2 135294853 135295109 -115392745 + LTR16A1 LTR ERVL 174 450 -7 1215 198 92 92 chr2 135295118 135295308 -115392546 - L1MC5 LINE L1 -292 7669 7480 309 26 0 0 chr2 135295308 135295346 -115392508 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 1215 198 92 92 chr2 135295346 135295898 -115391956 - L1MC5 LINE L1 -480 7481 6927 329 226 12 12 chr2 135296169 135296253 -115391601 - MIR SINE MIR -166 96 13 270 0 0 0 chr2 135296551 135296581 -115391273 + (T)n Simple_repeat Simple_repeat 1 30 0 249 250 0 15 chr2 135296873 135296941 -115390913 - MLT1L LTR MaLR -543 72 6 198 319 0 0 chr2 135297213 135297260 -115390594 + L2 LINE L2 3251 3297 -16 21 0 0 0 chr2 135297767 135297788 -115390066 + AT_rich Low_complexity Low_complexity 1 21 0 189 325 245 6 chr2 135297852 135298015 -115389839 + MIR SINE MIR 49 250 -12 353 256 151 17 chr2 135298044 135298216 -115389638 - MIR SINE MIR -21 241 47 2764 98 10 3 chr2 135298630 135299019 -115388835 - L1MA1 LINE L1 -3 6299 5908 554 272 111 8 chr2 135299310 135299545 -115388309 + MIR SINE MIR 3 261 -1 22 35 0 0 chr2 135299833 135299862 -115387992 + AT_rich Low_complexity Low_complexity 1 29 0 34 65 0 0 chr2 135300517 135300579 -115387275 + AT_rich Low_complexity Low_complexity 1 62 0 419 231 21 17 chr2 135300661 135300830 -115387024 + MER3 DNA MER1_type 1 209 0 261 155 0 0 chr2 135301322 135301380 -115386474 + CT-rich Low_complexity Low_complexity 4 61 0 2063 134 0 31 chr2 135301390 135301711 -115386143 - AluSx SINE Alu -1 311 1 1349 215 59 12 chr2 135303301 135303641 -115384213 - MLT1B LTR MaLR 0 390 35 2729 157 111 4 chr2 135304213 135304717 -115383137 - MER89 LTR ERV1 -1 558 1 1938 154 10 0 chr2 135305148 135305453 -115382401 + AluSx SINE Alu 1 308 -4 973 289 73 29 chr2 135305474 135305882 -115381972 - L1MC4a LINE L1 -1863 5945 5520 653 236 106 30 chr2 135306460 135306697 -115381157 - MER102b DNA MER1_type -1 340 86 1504 200 20 17 chr2 135306922 135307217 -115380637 - AluJo SINE Alu -16 296 1 314 317 50 10 chr2 135307684 135307785 -115380069 + MIR SINE MIR 107 211 -51 2154 114 3 3 chr2 135308238 135308528 -115379326 + AluSx SINE Alu 1 290 -22 247 245 0 0 chr2 135310471 135310524 -115377330 - MIR SINE MIR -114 148 96 4058 125 26 15 chr2 135311410 135312068 -115375786 - L1MA4A LINE L1 -4 6299 5635 922 138 74 79 chr2 135312241 135312444 -115375410 - AluSx SINE Alu -109 203 2 897 220 80 80 chr2 135312648 135312962 -115374892 + MER102b DNA MER1_type 2 315 -26 261 233 96 14 chr2 135314095 135314168 -115373686 + L2 LINE L2 3192 3270 -2 1865 151 95 104 chr2 135316084 135316516 -115371338 + MSTA LTR MaLR 1 428 0 317 341 37 0 chr2 135316668 135316803 -115371051 - L2 LINE L2 -960 2354 2215 757 273 169 33 chr2 135316882 135317337 -115370517 - MARNA DNA Mariner -13 573 57 34 0 0 0 chr2 135317379 135317413 -115370441 + AT_rich Low_complexity Low_complexity 1 34 0 210 286 0 0 chr2 135317838 135317887 -115369967 + (CTG)n Simple_repeat Simple_repeat 2 50 0 839 269 47 19 chr2 135319038 135319294 -115368560 - MLT1H1 LTR MaLR -279 276 14 2204 101 0 44 chr2 135319340 135319657 -115368197 - AluSx SINE Alu -9 303 1 460 255 92 13 chr2 135319811 135319964 -115367890 - MIR SINE MIR -24 238 74 2750 248 49 28 chr2 135322229 135323161 -115364693 + L1MC3 LINE L1 3758 4709 -1437 * 5694 166 41 58 chr2 135323159 135325448 -115362406 + L1MA9 LINE L1 4030 6312 0 * 9472 183 91 47 chr2 135325440 135327633 -115360221 + L1MC3 LINE L1 4691 7244 -541 236 284 29 39 chr2 135327633 135327735 -115360119 + MLT1F1 LTR MaLR 24 124 -443 9472 183 91 47 chr2 135327735 135328294 -115359560 + L1MC3 LINE L1 7244 7777 -8 2214 123 3 0 chr2 135328326 135328627 -115359227 - AluSq SINE Alu -11 302 1 452 209 186 32 chr2 135328711 135328928 -115358926 - MLT2B2 LTR ERVL -165 249 2 222 222 0 0 chr2 135332154 135332199 -115355655 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 1961 181 27 126 chr2 135332475 135332993 -115354861 + MER70A LTR ERVL 1 467 -5 217 254 79 26 chr2 135333666 135333780 -115354074 + MIR3 SINE MIR 40 159 -49 181 321 0 0 chr2 135333943 135333996 -115353858 + MIR3 SINE MIR 150 202 -6 184 283 0 0 chr2 135334157 135334203 -115353651 - L2 LINE L2 -7 3306 3261 449 323 37 6 chr2 135334302 135334466 -115353388 + MER5B DNA MER1_type 10 178 0 5546 69 21 6 chr2 135334572 135335272 -115352582 - L1PA8 LINE L1 -1 6171 5461 281 217 121 0 chr2 135335287 135335370 -115352484 + L2 LINE L2 2734 2826 -488 182 167 42 21 chr2 135335377 135335425 -115352429 - L2 LINE L2 0 3313 3265 191 61 30 0 chr2 135335473 135335506 -115352348 + (TA)n Simple_repeat Simple_repeat 1 34 0 387 75 0 0 chr2 135336825 135336878 -115350976 + MADE1 DNA Mariner 28 80 0 1757 258 18 0 chr2 135336945 135337399 -115350455 - L1MC4 LINE L1 -364 7678 7217 356 316 75 51 chr2 135337443 135337671 -115350183 + L2 LINE L2 2694 2941 -331 1384 224 143 33 chr2 135337671 135338126 -115349728 + MLT1D LTR MaLR 1 505 0 356 316 75 51 chr2 135338126 135338259 -115349595 + L2 LINE L2 2941 3069 -203 213 315 162 25 chr2 135338323 135338520 -115349334 + MIR SINE MIR 39 262 0 428 301 134 14 chr2 135339141 135339357 -115348497 + MIR SINE MIR 10 251 -11 921 131 6 27 chr2 135339380 135339563 -115348291 + (CACCAT)n Simple_repeat Simple_repeat 2 180 0 644 188 5 38 chr2 135339572 135339758 -115348096 + (CAT)n Simple_repeat Simple_repeat 1 180 0 633 224 13 0 chr2 135339792 135340114 -115347740 + (CAT)n Simple_repeat Simple_repeat 1 326 0 973 193 38 130 chr2 135390649 135391049 -115296805 + MLT1A1 LTR MaLR 1 363 -2 533 158 44 18 chr2 135391498 135391612 -115296242 + L1MB7 LINE L1 12 569 -6920 558 184 18 151 chr2 135392885 135393103 -115294751 - MER5A DNA MER1_type 0 189 1 3251 220 72 46 chr2 135393474 135395284 -115292570 + L1MB7 LINE L1 1177 3024 -4543 289 222 0 0 chr2 135396272 135396326 -115291528 - tRNA-Gly-GGC tRNA tRNA 0 74 21 511 267 97 32 chr2 135398172 135398511 -115289343 - ERVL LTR ERVL -2358 3406 2992 3795 174 30 16 chr2 135399569 135400339 -115287515 + L1MB7 LINE L1 6338 7140 -463 1072 212 114 25 chr2 135400339 135400655 -115287199 + MER2 DNA MER2_type 1 344 0 3795 174 30 16 chr2 135400655 135401110 -115286744 + L1MB7 LINE L1 7140 7587 -16 252 291 0 29 chr2 135402098 135402201 -115285653 - LTR67 LTR ERVL 0 557 458 1495 199 45 53 chr2 135402259 135402414 -115285440 + MLT1A2 LTR MaLR 1 156 -218 189 0 0 0 chr2 135402414 135402435 -115285419 + (GA)n Simple_repeat Simple_repeat 2 22 0 1495 199 45 53 chr2 135402435 135402656 -115285198 + MLT1A2 LTR MaLR 156 374 0 183 208 0 83 chr2 135404441 135404489 -115283365 + L2 LINE L2 353 396 -2918 311 280 160 17 chr2 135404660 135404835 -115283019 + MIR3 SINE MIR 3 202 -6 365 285 114 33 chr2 135405188 135405400 -115282454 - MIR SINE MIR -10 252 17 447 176 22 44 chr2 135405536 135405627 -115282227 + MIR SINE MIR 60 148 -114 528 236 122 65 chr2 135406906 135407135 -115280719 + MIR SINE MIR 1 242 -20 8085 136 63 12 chr2 135407271 135407549 -115280305 + Tigger3(Golem) DNA MER2_type 1491 1754 -1275 2420 95 0 0 chr2 135407549 135407855 -115279999 - AluSg SINE Alu -4 306 1 8085 136 63 12 chr2 135407855 135409040 -115278814 + Tigger3(Golem) DNA MER2_type 1754 3028 -1 3430 212 66 28 chr2 135409041 135409489 -115278365 + L1MA8 LINE L1 2578 3008 -4557 1956 215 8 0 chr2 135409489 135409885 -115277969 + MER57A LTR ERV1 5 403 0 3430 212 66 28 chr2 135409885 135411008 -115276846 + L1MA8 LINE L1 3008 4223 -3342 1754 199 41 28 chr2 135411008 135411399 -115276455 - MSTD LTR MaLR 0 396 1 3430 212 66 28 chr2 135411399 135411717 -115276137 + L1MA8 LINE L1 4223 4527 -3038 2119 109 3 3 chr2 135411894 135412187 -115275667 + AluSp SINE Alu 1 293 -20 8435 155 27 6 chr2 135412188 135412343 -115275511 + L1MA8 LINE L1 5114 5264 -2446 4126 173 12 26 chr2 135412343 135412623 -115275231 + MER44D DNA MER2_type 1 283 -2204 1627 164 35 3 chr2 135412623 135412910 -115274944 + AluJo SINE Alu 1 296 -16 4126 173 12 26 chr2 135412910 135413371 -115274483 + MER44D DNA MER2_type 283 604 -1 8435 155 27 6 chr2 135413371 135415576 -115272278 + L1MA8 LINE L1 5264 7523 -187 292 200 0 17 chr2 135415576 135415636 -115272218 - Tigger5 DNA MER2_type 0 2323 2265 827 165 21 5 chr2 135415687 135415875 -115271979 + L1MA8 LINE L1 7520 7710 0 197 348 22 29 chr2 135416161 135416299 -115271555 - L2 LINE L2 -458 2856 2720 360 0 0 0 chr2 135417189 135417229 -115270625 + (CA)n Simple_repeat Simple_repeat 1 40 0 1210 284 108 30 chr2 135417546 135418145 -115269709 + MLT2F LTR ERVL 18 663 0 340 335 98 15 chr2 135418162 135418487 -115269367 + L2 LINE L2 2553 2904 -410 2716 13 0 0 chr2 135418516 135418816 -115269038 + AluYa5 SINE Alu 1 300 -11 319 265 110 22 chr2 135418905 135419041 -115268813 + MER112 DNA MER1_type 4 151 -109 312 159 79 8 chr2 135419041 135419167 -115268687 + (TA)n Simple_repeat Simple_repeat 2 136 0 351 232 0 0 chr2 135419260 135419329 -115268525 + MER112 DNA MER1_type 178 246 -14 357 321 29 7 chr2 135419588 135419725 -115268129 + MIR SINE MIR 108 247 -15 2878 152 52 6 chr2 135420171 135420497 -115267357 - Tigger1 DNA MER2_type -1873 545 185 2158 128 0 0 chr2 135420497 135420794 -115267060 + AluSg SINE Alu 1 297 -13 2878 152 52 6 chr2 135420794 135420988 -115266866 - Tigger1 DNA MER2_type -2233 185 1 2010 204 15 48 chr2 135421507 135422027 -115265827 + MLT1D LTR MaLR 1 503 -2 411 262 63 79 chr2 135422645 135422832 -115265022 + MER112 DNA MER1_type 1 184 -76 2182 137 3 0 chr2 135422832 135423138 -115264716 + AluSq SINE Alu 1 307 -6 411 262 63 79 chr2 135423138 135423202 -115264652 + MER112 DNA MER1_type 184 248 -12 2900 274 89 34 chr2 135425214 135426914 -115260940 - L1M4 LINE L1 -877 5269 3476 307 333 46 84 chr2 135426948 135427029 -115260825 + L1MCb LINE L1 -137 4294967242 -5961 2207 117 0 0 chr2 135427029 135427348 -115260506 - AluSg SINE Alu 0 310 1 307 333 46 84 chr2 135427348 135427657 -115260197 + L1MCb LINE L1 -54 238 -5669 820 273 39 53 chr2 135427661 135428395 -115259459 + L1MCb LINE L1 1162 2100 -4507 409 163 22 11 chr2 135428381 135428473 -115259381 + L1MCb LINE L1 3213 3305 -3121 * 514 222 0 0 chr2 135428473 135428572 -115259282 - Tigger7 DNA MER2_type 0 2487 2389 * 1013 205 66 58 chr2 135428570 135428828 -115259026 - Tigger7 DNA MER2_type -466 267 8 762 208 11 52 chr2 135428835 135429104 -115258750 + L1MCb LINE L1 3301 3558 -2868 24 32 0 0 chr2 135429399 135429430 -115258424 + AT_rich Low_complexity Low_complexity 1 31 0 363 230 137 0 chr2 135430791 135430930 -115256924 + MER112 DNA MER1_type 86 243 -17 227 153 34 34 chr2 135431621 135431680 -115256174 - MER5B DNA MER1_type -1 177 119 293 203 31 0 chr2 135431906 135431970 -115255884 + MER5A DNA MER1_type 9 74 -115 270 224 118 26 chr2 135432213 135432289 -115255565 + L2 LINE L2 3176 3258 -55 554 275 174 28 chr2 135432359 135432715 -115255139 - MLT1I LTR MaLR 0 409 2 459 269 246 8 chr2 135432972 135433228 -115254626 + L3 LINE CR1 446 762 -815 231 280 173 12 chr2 135433600 135433768 -115254086 + MER117 DNA MER1_type 1 195 -2 467 236 191 112 chr2 135434392 135434901 -115252953 - MLT1H LTR MaLR 0 549 1 185 301 60 0 chr2 135435807 135435890 -115251964 - L2 LINE L2 -77 3236 3149 301 250 54 62 chr2 135436022 135436134 -115251720 + L2 LINE L2 3162 3272 0 189 0 0 0 chr2 135436885 135436906 -115250948 + (CAT)n Simple_repeat Simple_repeat 1 21 0 202 287 11 43 chr2 135436907 135437001 -115250853 - MIR SINE MIR -1 261 171 * 517 194 37 37 chr2 135437000 135437134 -115250720 + MIR SINE MIR 90 223 -39 354 212 9 25 chr2 135437148 135437240 -115250614 - MIR SINE MIR -35 173 78 240 122 0 0 chr2 135437734 135437775 -115250079 + (TG)n Simple_repeat Simple_repeat 1 41 0 418 270 18 9 chr2 135439198 135439309 -115248545 - MIR SINE MIR -59 149 38 501 261 191 13 chr2 135439928 135440127 -115247727 + MIR SINE MIR 7 241 -21 615 313 46 9 chr2 135441113 135441346 -115246508 + MIR SINE MIR 2 252 -10 220 148 0 37 chr2 135441358 135441412 -115246442 + (TTCC)n Simple_repeat Simple_repeat 4 55 0 330 234 279 36 chr2 135441852 135442062 -115245792 + MIR SINE MIR 16 254 -8 1877 164 56 13 chr2 135442090 135442463 -115245391 + MLT1B LTR MaLR 1 389 -1 22 0 0 0 chr2 135442592 135442614 -115245240 + AT_rich Low_complexity Low_complexity 1 22 0 1918 90 13 64 chr2 135443384 135443723 -115244131 + AluSq SINE Alu 1 313 0 234 299 41 41 chr2 135444152 135444249 -115243605 + MIR3 SINE MIR 98 194 -14 789 263 17 0 chr2 135444968 135445143 -115242711 - MER45A DNA AcHobo 0 178 1 21 0 0 0 chr2 135447168 135447189 -115240665 + AT_rich Low_complexity Low_complexity 1 21 0 1131 181 9 19 chr2 135448707 135448923 -115238931 + MER58A DNA MER1_type 1 214 -10 449 196 31 0 chr2 135448942 135449039 -115238815 - MER5C DNA MER1_type 0 324 225 605 203 51 0 chr2 135449059 135449177 -115238677 - MER5C DNA MER1_type -200 124 1 420 357 140 3 chr2 135449177 135449495 -115238359 + L2 LINE L2 2816 3177 -136 225 0 0 0 chr2 135449734 135449759 -115238095 + (TTG)n Simple_repeat Simple_repeat 3 27 0 2264 149 10 39 chr2 135449760 135450176 -115237678 - MSTC LTR MaLR -24 404 1 2486 81 0 0 chr2 135450254 135450564 -115237290 - AluY SINE Alu -1 310 1 347 271 131 0 chr2 135450838 135450945 -115236909 + L2 LINE L2 3136 3256 -16 572 236 93 53 chr2 135451214 135451439 -115236415 - MIR SINE MIR -13 249 16 1105 192 53 30 chr2 135452106 135452372 -115235482 + L1MB7 LINE L1 -247 24 -6256 428 223 176 7 chr2 135452448 135452596 -115235258 + L1MB7 LINE L1 16 188 -6092 764 194 24 4 chr2 135452621 135452794 -115235060 + L1MB7 LINE L1 1247 1510 -4862 4114 191 16 13 chr2 135452816 135453722 -115234132 + L1MB7 LINE L1 5497 6404 -16 419 252 55 0 chr2 135453789 135453916 -115233938 - MER115 DNA AcHobo -16 677 544 22 56 0 0 chr2 135454790 135454826 -115233028 + AT_rich Low_complexity Low_complexity 1 36 0 235 249 133 63 chr2 135454826 135455001 -115232853 + L1ME4a LINE L1 5643 5804 -317 2432 90 0 0 chr2 135455001 135455312 -115232542 + AluSq SINE Alu 1 311 -2 235 249 133 63 chr2 135455312 135455453 -115232401 + L1ME4a LINE L1 5804 5981 -140 13418 158 28 31 chr2 135455728 135456732 -115231122 + Tigger1 DNA MER2_type 1 1006 -1412 2151 113 10 3 chr2 135456732 135457033 -115230821 + AluSq SINE Alu 1 303 -10 13418 158 28 31 chr2 135457033 135458238 -115229616 + Tigger1 DNA MER2_type 1006 2205 -213 2811 13 0 0 chr2 135458238 135458546 -115229308 - AluYb8 SINE Alu -10 308 1 13418 158 28 31 chr2 135458546 135458760 -115229094 + Tigger1 DNA MER2_type 2205 2418 0 27 73 0 0 chr2 135458789 135458844 -115229010 + AT_rich Low_complexity Low_complexity 1 55 0 471 36 48 84 chr2 135458852 135458935 -115228919 + MADE1 DNA Mariner 1 80 0 394 358 28 0 chr2 135459364 135459540 -115228314 - MIR SINE MIR -33 229 49 240 294 0 0 chr2 135459812 135459880 -115227974 - Charlie8 DNA MER1_type -9 2408 2341 * 509 268 67 80 chr2 135459872 135460171 -115227683 - Charlie8 DNA MER1_type -2091 326 32 350 203 80 58 chr2 135460968 135461106 -115226748 - L1ME4a LINE L1 -21 6100 5960 738 194 90 1 chr2 135461723 135461904 -115225950 - L1MB7 LINE L1 -1 6177 5980 1791 170 8 28 chr2 135461904 135462299 -115225555 - L1MB7 LINE L1 -876 5270 4884 304 182 3 0 chr2 135462336 135462401 -115225453 - MIR SINE MIR -68 140 88 24 0 0 0 chr2 135462517 135462541 -115225313 + AT_rich Low_complexity Low_complexity 1 24 0 1841 123 14 7 chr2 135464460 135464752 -115223102 + L1PB1 LINE L1 5857 6150 -1 446 298 34 68 chr2 135465115 135465240 -115222614 - MIR SINE MIR -10 252 137 189 94 0 0 chr2 135465240 135465272 -115222582 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 446 298 34 68 chr2 135465272 135465381 -115222473 - MIR SINE MIR -125 137 26 269 307 105 18 chr2 135466801 135466915 -115220939 - L2 LINE L2 -2 3270 3147 2108 105 14 0 chr2 135467116 135467428 -115220426 - AluSg SINE Alu 0 316 1 207 305 51 0 chr2 135468550 135468609 -115219245 - MIR3 SINE MIR -46 162 101 11889 202 41 27 chr2 135469649 135470624 -115217230 - L1MB1 LINE L1 -295 6109 5149 1868 153 3 26 chr2 135470624 135470937 -115216917 - AluSx SINE Alu -6 306 1 11889 202 41 27 chr2 135470937 135473685 -115214169 - L1MB1 LINE L1 -1255 5149 2361 228 35 0 0 chr2 135473685 135473714 -115214140 + (CCCTG)n Simple_repeat Simple_repeat 3 31 0 11889 202 41 27 chr2 135473714 135473757 -115214097 - L1MB1 LINE L1 -4043 2361 2320 481 223 14 5 chr2 135473774 135473991 -115213863 + CT-rich Low_complexity Low_complexity 1 219 0 689 129 6 51 chr2 135473991 135474169 -115213685 + (TTTCC)n Simple_repeat Simple_repeat 4 173 0 1325 214 30 0 chr2 135474171 135474433 -115213421 - AluJo SINE Alu -1 311 42 1580 266 42 30 chr2 135474433 135475248 -115212606 - L1MB1 LINE L1 -4051 2331 1421 201 154 0 0 chr2 135475436 135475475 -115212379 + (CA)n Simple_repeat Simple_repeat 2 40 0 216 226 0 0 chr2 135475524 135475586 -115212268 + CT-rich Low_complexity Low_complexity 3 64 0 344 276 65 0 chr2 135475793 135475916 -115211938 - MIR SINE MIR -6 256 126 22 0 0 0 chr2 135476072 135476094 -115211760 + AT_rich Low_complexity Low_complexity 1 22 0 204 179 54 54 chr2 135476098 135476154 -115211700 + L2 LINE L2 3212 3267 -5 180 340 31 107 chr2 135476710 135476869 -115210985 - L2 LINE L2 -16 3256 3110 1242 189 42 86 chr2 135477126 135477479 -115210375 - MLT2B1 LTR ERVL -75 445 1 259 308 7 126 chr2 135477497 135477783 -115210071 - L2 LINE L2 -193 3079 2828 1674 173 47 76 chr2 135479070 135479515 -115208339 + MSTB1 LTR MaLR 1 432 0 255 212 212 0 chr2 135480531 135480597 -115207257 + L2 LINE L2 3184 3263 -9 275 256 0 74 chr2 135481402 135481523 -115206331 - L1ME3A LINE L1 -222 5931 5820 585 290 40 30 chr2 135482032 135482447 -115205407 - L1ME3A LINE L1 -451 5716 5279 2088 119 7 3 chr2 135482554 135482849 -115205005 - AluSg SINE Alu -14 296 1 332 322 120 47 chr2 135483174 135483516 -115204338 - L1MCa LINE L1 -4630 1680 1126 287 291 98 38 chr2 135483547 135483894 -115203960 - L1MCa LINE L1 -4880 1239 872 207 0 0 0 chr2 135484560 135484583 -115203271 + (T)n Simple_repeat Simple_repeat 1 23 0 304 235 24 0 chr2 135484584 135484669 -115203185 - L1MCa LINE L1 -5315 804 718 353 347 47 0 chr2 135484731 135484881 -115202973 - L1MCa LINE L1 -5503 616 460 304 118 211 0 chr2 135484902 135484978 -115202876 + MER53 DNA DNA 1 92 -97 30 45 0 0 chr2 135484996 135485040 -115202814 + AT_rich Low_complexity Low_complexity 1 44 0 511 261 97 79 chr2 135485090 135485470 -115202384 - L1MCa LINE L1 -5656 463 77 188 323 15 0 chr2 135485495 135485560 -115202294 + L2 LINE L2 1820 1885 -1429 704 157 65 54 chr2 135486859 135486886 -115200968 + MER53 DNA DNA 3 28 -161 2145 123 0 19 chr2 135486886 135487203 -115200651 + AluSx SINE Alu 1 311 -1 704 157 65 54 chr2 135487203 135487360 -115200494 + MER53 DNA DNA 28 189 0 321 309 93 6 chr2 135488286 135488448 -115199406 + MIR SINE MIR 39 214 -48 266 379 40 0 chr2 135488654 135488828 -115199026 + MER117 DNA MER1_type 2 182 -15 497 292 47 4 chr2 135490516 135490773 -115197081 - L1ME4a LINE L1 -199 5922 5655 255 247 91 65 chr2 135490899 135491085 -115196769 - MLT1H LTR MaLR -158 391 201 906 153 0 0 chr2 135491095 135491239 -115196615 - L1PA10 LINE L1 -10 6158 6015 1039 216 20 44 chr2 135491239 135491535 -115196319 - L1MB8 LINE L1 -30 6148 5860 8662 127 12 1 chr2 135491549 135493710 -115194144 - L1PA10 LINE L1 -4 6164 3989 473 221 6 61 chr2 135493761 135493924 -115193930 - MLT1H LTR MaLR -395 154 1 967 163 12 0 chr2 135494049 135494209 -115193645 - AluSx SINE Alu -150 162 1 332 234 71 35 chr2 135494363 135494504 -115193350 - L1MB8 LINE L1 -811 5431 5286 2088 227 96 51 chr2 135494850 135495811 -115192043 - L1MC5 LINE L1 -50 7911 6908 2177 45 4 8 chr2 135495811 135496079 -115191775 - AluY SINE Alu -10 301 35 795 323 38 23 chr2 135496190 135496660 -115191194 - L1MC4a LINE L1 -926 6882 6406 34 0 0 0 chr2 135497457 135497491 -115190363 + AT_rich Low_complexity Low_complexity 1 34 0 14078 222 13 25 chr2 135497493 135502418 -115185436 - L1PB1 LINE L1 -8 6859 1848 3715 25 5 2 chr2 135502425 135502869 -115184985 - L1PA3 LINE L1 0 6155 5711 31649 32 0 0 chr2 135502970 135507846 -115180008 - L1PA3 LINE L1 -155 6000 1126 754 144 8 0 chr2 135507843 135507968 -115179886 - L1PB1 LINE L1 -6113 750 625 * 1061 170 16 0 chr2 135507961 135508155 -115179699 - L1PB1 LINE L1 -6664 199 3 212 120 0 60 chr2 135510842 135510892 -115176962 + (TGGGGG)n Simple_repeat Simple_repeat 5 51 0 184 298 18 18 chr2 135511615 135511672 -115176182 + L3 LINE CR1 104 160 -1417 280 276 155 9 chr2 135512791 135512907 -115174947 - L2 LINE L2 -1 3271 3139 193 279 78 54 chr2 135513235 135513364 -115174490 - L2 LINE L2 -480 2834 2703 21 0 0 0 chr2 135514502 135514523 -115173331 + AT_rich Low_complexity Low_complexity 1 21 0 231 245 19 0 chr2 135515426 135515479 -115172375 - MER5A DNA MER1_type 0 189 136 * 236 256 47 58 chr2 135515476 135515562 -115172292 + MER5A DNA MER1_type 105 189 0 403 256 161 22 chr2 135517348 135517528 -115170326 - MIR SINE MIR -47 215 11 2245 117 0 0 chr2 135517628 135517926 -115169928 + AluSx SINE Alu 1 298 -14 2200 96 17 3 chr2 135518297 135518598 -115169256 + AluSp SINE Alu 1 305 -8 2205 129 6 0 chr2 135518610 135518921 -115168933 + AluSp SINE Alu 1 313 0 700 234 114 10 chr2 135519362 135519563 -115168291 + MER58A DNA MER1_type 1 222 -2 201 345 117 29 chr2 135520026 135520342 -115167512 + L2 LINE L2 2603 2946 -368 257 0 30 0 chr2 135520375 135520408 -115167446 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2104 108 0 11 chr2 135520408 135520687 -115167167 - AluSx SINE Alu -36 276 1 339 241 0 0 chr2 135520711 135520790 -115167064 + L2 LINE L2 3194 3272 0 212 256 0 0 chr2 135521757 135521800 -115166054 + polypyrimidine Low_complexity Low_complexity 2 44 0 299 255 62 35 chr2 135522773 135522918 -115164936 - MER117 DNA MER1_type -47 150 2 * 1689 179 68 75 chr2 135522917 135523385 -115164469 + MLT1C LTR MaLR 3 467 0 873 265 9 0 chr2 135523897 135524112 -115163742 - MIR SINE MIR -32 230 14 2394 86 0 16 chr2 135524431 135524745 -115163109 - AluY SINE Alu -2 309 1 641 213 110 0 chr2 135524765 135524929 -115162925 - MER5A DNA MER1_type 0 189 8 183 404 46 0 chr2 135525229 135525338 -115162516 + L3b LINE CR1 1465 1578 -5 186 309 193 37 chr2 135525457 135525752 -115162102 + L2 LINE L2 2365 2705 -609 396 200 20 100 chr2 135525753 135525805 -115162049 + MER58B DNA MER1_type 1 43 -2377 971 114 0 182 chr2 135525805 135526041 -115161813 - 7SK RNA RNA 0 193 1 396 200 20 100 chr2 135526041 135526088 -115161766 + MER58B DNA MER1_type 43 92 -2328 379 157 133 0 chr2 135526103 135526186 -115161668 - L1MA2 LINE L1 0 6304 6211 1235 202 32 0 chr2 135526207 135526460 -115161394 + MER58B DNA MER1_type 77 337 -4 410 178 34 14 chr2 135526662 135526808 -115161046 + GA-rich Low_complexity Low_complexity 3 151 0 186 103 0 0 chr2 135526880 135526909 -115160945 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 215 302 35 12 chr2 135526978 135527064 -115160790 + L2 LINE L2 2956 3043 -229 189 0 0 0 chr2 135527228 135527249 -115160605 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 202 329 0 12 chr2 135527588 135527670 -115160184 - L2 LINE L2 -6 3307 3227 215 140 20 0 chr2 135527789 135527839 -115160015 + GA-rich Low_complexity Low_complexity 2 52 0 458 199 104 13 chr2 135528334 135528469 -115159385 + L1MA2 LINE L1 6157 6304 0 21 0 0 0 chr2 135528600 135528621 -115159233 + AT_rich Low_complexity Low_complexity 1 21 0 235 253 11 81 chr2 135529883 135529970 -115157884 + L1MC/D LINE L1 5704 5784 -2024 225 0 0 0 chr2 135530051 135530076 -115157778 + (TG)n Simple_repeat Simple_repeat 2 26 0 234 0 0 0 chr2 135530482 135530508 -115157346 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 285 196 41 21 chr2 135531075 135531172 -115156682 + (CA)n Simple_repeat Simple_repeat 2 100 0 216 111 0 0 chr2 135531208 135531244 -115156610 + (CA)n Simple_repeat Simple_repeat 1 36 0 2148 67 26 106 chr2 135531586 135531927 -115155927 - AluYb8 SINE Alu -4 314 1 260 157 20 0 chr2 135532326 135532377 -115155477 + L2 LINE L2 3262 3313 0 1750 296 74 20 chr2 135532492 135533602 -115154252 + L2 LINE L2 2135 3306 -7 752 181 4 4 chr2 135533628 135533876 -115153978 + GA-rich Low_complexity Low_complexity 1 248 0 381 217 53 118 chr2 135533949 135534212 -115153642 + MER112 DNA MER1_type 8 253 -7 196 224 399 14 chr2 135534794 135534937 -115152917 - MIR SINE MIR -30 232 35 396 0 0 0 chr2 135535340 135535384 -115152470 + (TG)n Simple_repeat Simple_repeat 1 44 0 189 234 21 0 chr2 135536230 135536277 -115151577 + L3b LINE CR1 1421 1468 -115 576 269 76 31 chr2 135536281 135536504 -115151350 + MIR SINE MIR 19 251 -11 322 186 147 10 chr2 135536998 135537100 -115150754 - L1MA9 LINE L1 -38 6274 6159 180 0 0 0 chr2 135537107 135537127 -115150727 + (TTTTC)n Simple_repeat Simple_repeat 5 24 0 * 549 80 0 0 chr2 135537123 135537198 -115150656 + (TTCC)n Simple_repeat Simple_repeat 2 76 0 561 200 120 0 chr2 135537198 135537348 -115150506 - L1MA9 LINE L1 -147 6165 5998 2070 145 3 0 chr2 135537356 135537653 -115150201 - AluSx SINE Alu -14 298 1 2559 60 0 3 chr2 135538083 135538383 -115149471 + AluY SINE Alu 1 299 -12 1157 178 42 142 chr2 135538567 135539114 -115148740 - MSTB LTR MaLR 0 418 1 290 310 0 10 chr2 135539193 135539293 -115148561 - L1ME LINE L1 -537 5584 5486 884 218 28 0 chr2 135539909 135540088 -115147766 - MER5A DNA MER1_type -5 184 1 21 0 0 0 chr2 135541955 135541976 -115145878 + AT_rich Low_complexity Low_complexity 1 21 0 864 238 14 9 chr2 135542972 135543195 -115144659 + MIR SINE MIR 29 252 -10 495 293 105 54 chr2 135543459 135543810 -115144044 - LTR16A LTR ERVL -4 446 78 238 254 149 0 chr2 135544227 135544294 -115143560 + MER81 DNA DNA 1 77 -37 1587 55 13 51 chr2 135544499 135544735 -115143119 + L1PA4 LINE L1 5929 6155 0 204 125 0 0 chr2 135547627 135547659 -115140195 + (A)n Simple_repeat Simple_repeat 1 32 0 379 241 0 89 chr2 135550084 135550242 -115137612 + MIR SINE MIR 28 171 -91 680 93 0 28 chr2 135550242 135550349 -115137505 - AluSp/q SINE Alu -1 312 209 221 246 116 0 chr2 135551812 135551881 -115135973 - L2 LINE L2 0 3313 3237 427 267 89 17 chr2 135552194 135552374 -115135480 - L1MC/D LINE L1 -2048 5760 5568 387 0 0 0 chr2 135554549 135554592 -115133262 + (CA)n Simple_repeat Simple_repeat 2 44 0 339 265 29 10 chr2 135555479 135555581 -115132273 - MIR SINE MIR -64 144 41 763 303 15 15 chr2 135556664 135556925 -115130929 + MIR SINE MIR 2 262 0 325 280 20 20 chr2 135556933 135557033 -115130821 + MER5A DNA MER1_type 66 165 -24 210 284 18 55 chr2 135556946 135557055 -115130799 - MER5A DNA MER1_type -67 122 18 * 195 206 0 0 chr2 135557815 135557849 -115130005 + MIR SINE MIR 217 250 -12 520 270 165 10 chr2 135557924 135558102 -115129752 - MIR SINE MIR -16 246 32 2208 135 0 0 chr2 135558102 135558398 -115129456 - AluSq SINE Alu -17 296 1 520 270 165 10 chr2 135558398 135558419 -115129435 - MIR SINE MIR -230 32 16 2346 98 10 0 chr2 135558655 135558961 -115128893 - AluSc SINE Alu 0 309 1 198 143 0 0 chr2 135560010 135560045 -115127809 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 254 224 147 18 chr2 135560217 135560387 -115127467 - HAL1 LINE L1 -305 2202 2011 632 294 10 10 chr2 135561797 135561991 -115125863 + L2 LINE L2 3120 3313 0 323 241 103 0 chr2 135562528 135562615 -115125239 + MIR SINE MIR 48 143 -65 1377 178 23 23 chr2 135562631 135562889 -115124965 + AluJo SINE Alu 1 258 -54 532 293 54 12 chr2 135562921 135563088 -115124766 - MIR SINE MIR -8 254 81 198 0 0 0 chr2 135563523 135563545 -115124309 + (T)n Simple_repeat Simple_repeat 1 22 0 223 308 15 23 chr2 135563814 135563947 -115123907 + CT-rich Low_complexity Low_complexity 1 132 0 240 266 13 25 chr2 135564212 135564291 -115123563 + MIR3 SINE MIR 123 200 -8 226 376 8 34 chr2 135565852 135565969 -115121885 + L3 LINE CR1 1111 1224 -353 1920 230 70 28 chr2 135565972 135566590 -115121264 - L1ME3A LINE L1 -2 6168 5525 250 371 119 0 chr2 135566599 135566758 -115121096 + L3 LINE CR1 1294 1471 -106 1250 190 197 42 chr2 135567854 135568433 -115119421 + MLT1E1 LTR MaLR 1 624 0 22636 36 24 2 chr2 135569490 135575380 -115112474 - L1PA2 LINE L1 0 6155 2 297 0 61 20 chr2 135575537 135575586 -115112268 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 295 322 33 53 chr2 135577517 135577818 -115110036 + L1MC4a LINE L1 5630 5924 -1884 321 246 70 53 chr2 135578773 135578821 -115109033 - MIR SINE MIR -3 259 213 2585 161 14 2 chr2 135578821 135579242 -115108612 - MSTB LTR MaLR 0 426 1 321 246 70 53 chr2 135579242 135579307 -115108547 - MIR SINE MIR -49 213 144 251 269 15 15 chr2 135579309 135579376 -115108478 - MIR SINE MIR -92 170 104 341 218 32 73 chr2 135579841 135579965 -115107889 + L1ME4a LINE L1 5730 5848 -273 503 298 39 17 chr2 135580040 135580221 -115107633 + LTR67 LTR ERVL 3 187 -370 297 284 46 9 chr2 135580336 135580445 -115107409 + LTR67 LTR ERVL 354 466 -91 23 78 0 0 chr2 135580935 135580986 -115106868 + AT_rich Low_complexity Low_complexity 1 51 0 26 64 0 0 chr2 135581142 135581189 -115106665 + AT_rich Low_complexity Low_complexity 1 47 0 2155 136 7 0 chr2 135581282 135581592 -115106262 - AluSx SINE Alu 0 312 1 249 286 54 0 chr2 135581767 135581879 -115105975 - L1MEc LINE L1 -4737 1659 1542 2241 112 0 3 chr2 135582042 135582347 -115105507 - AluY SINE Alu -7 304 1 472 326 119 33 chr2 135582359 135582696 -115105158 - L1MEc LINE L1 -4902 1303 938 216 261 34 25 chr2 135582716 135582835 -115105019 + T-rich Low_complexity Low_complexity 6 125 0 2652 49 0 0 chr2 135583006 135583314 -115104540 + AluY SINE Alu 1 308 -3 3066 218 40 35 chr2 135584642 135585663 -115102191 + L1MB7 LINE L1 4343 5368 -778 * 4680 156 23 19 chr2 135585648 135587094 -115100760 + L1PB4 LINE L1 4696 6142 -14 3640 180 36 27 chr2 135587111 135587924 -115099930 + L1MB7 LINE L1 5354 6173 -11 254 350 49 8 chr2 135587978 135588101 -115099753 - MIR3 SINE MIR -10 198 71 25 0 0 0 chr2 135588481 135588506 -115099348 + AT_rich Low_complexity Low_complexity 1 25 0 542 286 64 17 chr2 135588884 135589118 -115098736 + MER102b DNA MER1_type 97 341 0 559 210 6 62 chr2 135589346 135589508 -115098346 + MER106A DNA MER1_type 30 182 -54 256 272 48 56 chr2 135589763 135589888 -115097966 + L1ME3A LINE L1 5510 5633 -488 316 346 60 57 chr2 135589933 135590317 -115097537 + L1ME3A LINE L1 5687 5948 -222 258 202 32 11 chr2 135590932 135591026 -115096828 + (TTAA)n Simple_repeat Simple_repeat 3 98 0 242 180 16 0 chr2 135591047 135591108 -115096746 + CT-rich Low_complexity Low_complexity 3 64 0 887 250 108 52 chr2 135591166 135591682 -115096172 - MLT1H LTR MaLR -3 546 2 569 282 28 21 chr2 135591688 135591972 -115095882 + L1 LINE L1 4517 4802 -1344 311 217 105 31 chr2 135592261 135592461 -115095393 + L1 LINE L1 5180 5403 -743 364 348 103 13 chr2 135592596 135592829 -115095025 + L1MC/D LINE L1 5563 5816 -1992 341 336 70 14 chr2 135593154 135593501 -115094353 + L3 LINE CR1 1140 1575 -2 446 241 292 0 chr2 135593695 135593832 -115094022 + MER5A DNA MER1_type 13 189 0 284 233 0 11 chr2 135593996 135594086 -115093768 + (TA)n Simple_repeat Simple_repeat 1 89 0 1879 179 10 3 chr2 135594156 135594464 -115093390 - AluJb SINE Alu -2 310 1 25 31 0 0 chr2 135595379 135595411 -115092443 + AT_rich Low_complexity Low_complexity 1 32 0 1112 118 0 6 chr2 135595903 135596081 -115091773 + (TTCC)n Simple_repeat Simple_repeat 4 180 0 247 222 22 89 chr2 135596110 135596200 -115091654 + L2 LINE L2 3229 3312 -1 514 292 37 6 chr2 135596260 135596421 -115091433 - MIR SINE MIR -74 188 23 340 121 17 0 chr2 135596564 135596622 -115091232 + L1MB7 LINE L1 6109 6167 -17 296 267 8 0 chr2 135597252 135597383 -115090471 + (CA)n Simple_repeat Simple_repeat 2 133 0 533 245 126 25 chr2 135598058 135598217 -115089637 - MER5B DNA MER1_type -3 175 1 395 229 107 38 chr2 135598237 135598368 -115089486 + MER5B DNA MER1_type 35 174 -4 199 365 42 31 chr2 135598442 135598538 -115089316 - L2 LINE L2 -18 3295 3199 345 123 0 0 chr2 135598894 135598959 -115088895 + (TG)n Simple_repeat Simple_repeat 1 65 0 257 242 50 17 chr2 135599871 135599991 -115087863 - LTR33A LTR ERVL -23 500 377 1857 186 37 5 chr2 135600415 135600791 -115087063 + MLT1B LTR MaLR 1 388 -2 379 321 38 38 chr2 135601676 135601888 -115085966 - MIR SINE MIR -4 258 47 2283 87 0 29 chr2 135602028 135602340 -115085514 - AluSc SINE Alu -6 303 1 380 340 78 13 chr2 135602373 135602526 -115085328 + L2 LINE L2 3118 3280 -33 256 300 0 0 chr2 135603977 135604037 -115083817 - L2 LINE L2 0 3313 3254 263 220 0 0 chr2 135604349 135604399 -115083455 + L2 LINE L2 3262 3311 -2 438 20 0 0 chr2 135605169 135605220 -115082634 + (CA)n Simple_repeat Simple_repeat 2 52 0 530 282 46 84 chr2 135605221 135605544 -115082310 + L1MC/D LINE L1 5452 5762 -2046 3343 76 32 13 chr2 135605566 135606038 -115081816 - L1PA7 LINE L1 -6 6148 5668 1190 115 6 0 chr2 135608362 135608519 -115079335 - AluSq SINE Alu -23 290 133 1830 99 20 111 chr2 135608521 135608865 -115078989 - AluYb8 SINE Alu -5 313 1 1486 205 104 29 chr2 135609213 135609647 -115078207 + MER31B LTR ERV1 2 543 0 1990 232 265 32 chr2 135609889 135610704 -115077150 - L1MC4 LINE L1 -280 7762 6758 1274 266 53 30 chr2 135610705 135611099 -115076755 - L1MC4 LINE L1 -2103 5705 5303 216 0 0 0 chr2 135613049 135613073 -115074781 + (TA)n Simple_repeat Simple_repeat 1 24 0 5550 200 70 68 chr2 135613540 135614102 -115073752 + L1MDa LINE L1 441 1000 -5540 1957 142 6 25 chr2 135614102 135614420 -115073434 + AluSx SINE Alu 1 312 0 2487 62 0 16 chr2 135614429 135614738 -115073116 + AluY SINE Alu 1 304 -7 5550 200 70 68 chr2 135614738 135614768 -115073086 + L1MDa LINE L1 1007 1035 -5505 1187 193 159 41 chr2 135614768 135615038 -115072816 + AluJo SINE Alu 1 302 0 5550 200 70 68 chr2 135615038 135615063 -115072791 + L1MDa LINE L1 1035 1058 -5482 1238 172 43 30 chr2 135615063 135615295 -115072559 - MER46A DNA MER2_type 0 236 2 5550 200 70 68 chr2 135615295 135616208 -115071646 + L1MDa LINE L1 1058 1990 -4550 1811 165 0 13 chr2 135616208 135616524 -115071330 - AluJb SINE Alu 0 312 1 5550 200 70 68 chr2 135616524 135616577 -115071277 + L1MDa LINE L1 1990 2041 -4499 1317 193 75 0 chr2 135616577 135616857 -115070997 + L1 LINE L1 4986 5286 -860 2022 196 94 6 chr2 135616900 135617399 -115070455 + L1MDa LINE L1 2031 2573 -3967 1378 201 0 39 chr2 135617407 135617691 -115070163 + AluJb SINE Alu 37 309 -3 6506 226 57 33 chr2 135617704 135619834 -115068020 + L1MDa LINE L1 2582 4762 -1778 2526 192 31 14 chr2 135619846 135620425 -115067429 - L1PA16 LINE L1 0 6166 5578 343 293 0 20 chr2 135621953 135622052 -115065802 - MIR SINE MIR -109 153 57 2615 65 0 0 chr2 135622053 135622363 -115065491 + AluY SINE Alu 1 310 -1 27 29 0 0 chr2 135622633 135622667 -115065187 + AT_rich Low_complexity Low_complexity 1 34 0 227 293 27 13 chr2 135623997 135624072 -115063782 + L2 LINE L2 3227 3302 -11 243 161 0 0 chr2 135624407 135624463 -115063391 + (TG)n Simple_repeat Simple_repeat 2 57 0 201 143 0 29 chr2 135624875 135624910 -115062944 + (CAGGG)n Simple_repeat Simple_repeat 2 35 0 233 243 204 10 chr2 135625780 135625883 -115061971 - MIR3 SINE MIR -8 200 78 1197 244 130 86 chr2 135627168 135627667 -115060187 + LTR33 LTR ERVL 1 521 0 641 250 53 27 chr2 135628084 135628272 -115059582 - MER58A DNA MER1_type 0 224 32 737 269 36 27 chr2 135629695 135629959 -115057895 - MIR SINE MIR 0 262 5 186 133 0 0 chr2 135630288 135630318 -115057536 + (TG)n Simple_repeat Simple_repeat 2 31 0 1103 184 19 5 chr2 135630864 135631070 -115056784 - MER20 DNA MER1_type 0 219 11 251 236 258 0 chr2 135631073 135631162 -115056692 + L2 LINE L2 3161 3272 0 231 274 26 53 chr2 135631450 135631563 -115056291 + Charlie4 DNA MER1_type 1844 1953 -8 628 290 75 8 chr2 135633878 135634330 -115053524 - LTR33 LTR ERVL -8 513 1 193 278 0 0 chr2 135634662 135634716 -115053138 + MIR SINE MIR 78 131 -131 510 291 23 55 chr2 135634982 135635202 -115052652 + MIR SINE MIR 21 233 -29 264 195 65 39 chr2 135637228 135637305 -115050549 + MIR SINE MIR 58 136 -72 225 65 0 0 chr2 135637850 135637881 -115049973 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 321 363 68 14 chr2 135639349 135639495 -115048359 + L2 LINE L2 3115 3268 -4 249 322 74 54 chr2 135639519 135639668 -115048186 + MIR3 SINE MIR 55 206 -2 21 0 0 0 chr2 135640034 135640055 -115047799 + AT_rich Low_complexity Low_complexity 1 21 0 2415 91 0 0 chr2 135640848 135641156 -115046698 + AluSg SINE Alu 1 308 -2 227 266 31 0 chr2 135641995 135642059 -115045795 + CT-rich Low_complexity Low_complexity 2 67 0 548 180 11 17 chr2 135642143 135642321 -115045533 + CT-rich Low_complexity Low_complexity 3 179 0 924 199 38 32 chr2 135643948 135644134 -115043720 - MER5A DNA MER1_type 0 189 3 4979 151 66 5 chr2 135645357 135646206 -115041648 - MER4D LTR ERV1 -2 901 1 394 280 86 0 chr2 135647126 135647219 -115040635 - L2 LINE L2 -16 3297 3197 422 273 26 22 chr2 135648033 135648180 -115039674 - MIR SINE MIR -63 145 30 185 275 25 62 chr2 135648227 135648307 -115039547 - L2 LINE L2 -44 3228 3152 232 253 91 30 chr2 135648321 135648420 -115039434 - MIR SINE MIR -43 219 115 234 0 0 0 chr2 135648534 135648560 -115039294 + (CA)n Simple_repeat Simple_repeat 2 27 0 398 290 156 41 chr2 135649306 135649575 -115038279 + L2 LINE L2 3014 3313 0 1566 142 8 23 chr2 135651609 135651774 -115036080 - AluJo SINE Alu -23 289 128 1808 119 28 0 chr2 135651774 135652026 -115035828 - AluSc SINE Alu -13 296 38 1566 142 8 23 chr2 135652026 135652120 -115035734 - AluJo SINE Alu -184 128 34 189 362 52 26 chr2 135653225 135653341 -115034513 - MIR3 SINE MIR -88 120 2 370 336 25 0 chr2 135655683 135655805 -115032049 - MIR3 SINE MIR -53 155 31 1832 132 102 24 chr2 135655834 135656167 -115031687 - MER46B DNA MER2_type -2 234 1 237 355 28 19 chr2 135656354 135656461 -115031393 + L3b LINE CR1 1467 1574 -9 408 275 125 31 chr2 135656803 135656963 -115030891 - MER5B DNA MER1_type -3 175 1 210 173 40 0 chr2 135657555 135657630 -115030224 + (TAGA)n Simple_repeat Simple_repeat 1 78 0 3198 174 77 42 chr2 135657876 135658199 -115029655 + L1MA4A LINE L1 5471 5781 -522 1758 160 24 3 chr2 135658199 135658493 -115029361 + AluSx SINE Alu 13 312 0 3198 174 77 42 chr2 135658493 135658836 -115029018 + L1MA4A LINE L1 5781 6170 -133 3415 57 17 2 chr2 135658836 135659254 -115028600 + L1PA13 LINE L1 5721 6144 -19 3198 174 77 42 chr2 135659254 135659368 -115028486 + L1MA4A LINE L1 6170 6279 -24 367 317 7 21 chr2 135659921 135660063 -115027791 - LTR16C LTR ERVL -52 439 300 2260 129 0 0 chr2 135660473 135660784 -115027070 + AluSx SINE Alu 1 311 -1 1066 111 17 6 chr2 135661060 135661232 -115026622 - L1MA4A LINE L1 -6 6297 6124 271 324 101 64 chr2 135661241 135661460 -115026394 + MIR SINE MIR 10 236 -26 424 259 118 18 chr2 135661687 135661857 -115025997 + Charlie8 DNA MER1_type 77 263 -2154 216 270 25 110 chr2 135662142 135662305 -115025549 - MIR SINE MIR -67 195 47 2111 214 36 17 chr2 135662700 135663232 -115024622 + MER44D DNA MER2_type 1 597 -8 456 246 16 91 chr2 135665459 135665596 -115022258 + Charlie8 DNA MER1_type 6 127 -214 2245 120 0 0 chr2 135665596 135665904 -115021950 + AluSg SINE Alu 1 308 -2 456 246 16 91 chr2 135665904 135665953 -115021901 + Charlie8 DNA MER1_type 127 178 -163 3427 125 38 29 chr2 135666033 135666504 -115021350 - L1MA8 LINE L1 -21 6270 5805 300 111 0 0 chr2 135666504 135666549 -115021305 + (TG)n Simple_repeat Simple_repeat 2 46 0 387 0 0 0 chr2 135666549 135666592 -115021262 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 3427 125 38 29 chr2 135666592 135666775 -115021079 - L1MA8 LINE L1 -485 5806 5609 908 167 0 78 chr2 135667125 135667329 -115020525 + MER5A DNA MER1_type 1 188 -1 2376 68 0 3 chr2 135667360 135667653 -115020201 - AluSc SINE Alu -17 292 1 292 309 96 43 chr2 135667719 135667949 -115019905 - L2 LINE L2 -669 2645 2404 185 0 0 39 chr2 135669616 135669642 -115018212 + (ATG)n Simple_repeat Simple_repeat 2 26 0 40409 39 22 1 chr2 135669665 135675694 -115012160 + L1PA2 LINE L1 1 6155 0 263 222 157 37 chr2 135675704 135675812 -115012042 - MIR SINE MIR -33 229 109 2103 96 4 4 chr2 135675984 135676293 -115011561 - AluY SINE Alu 0 309 1 235 267 50 17 chr2 135676303 135676363 -115011491 - L2 LINE L2 0 3272 3211 569 128 0 0 chr2 135676381 135676467 -115011387 + Tigger7 DNA MER2_type 347 432 -301 212 253 0 80 chr2 135677962 135678037 -115009817 - MIR SINE MIR -70 192 124 238 297 76 0 chr2 135678711 135678829 -115009025 + L1MEd LINE L1 680 806 -5313 308 315 0 0 chr2 135678937 135679026 -115008828 + MLT1J1 LTR MaLR 59 147 -299 23 0 0 0 chr2 135680171 135680194 -115007660 + AT_rich Low_complexity Low_complexity 1 23 0 618 164 58 0 chr2 135681368 135681472 -115006382 + FLAM_C SINE Alu 9 118 -25 426 284 88 72 chr2 135684062 135684562 -115003292 - MLT1J LTR MaLR -3 508 1 34 24 0 0 chr2 135685678 135685719 -115002135 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 135686467 135686489 -115001365 + AT_rich Low_complexity Low_complexity 1 22 0 183 129 0 0 chr2 135686947 135686978 -115000876 + (TTCC)n Simple_repeat Simple_repeat 1 31 0 353 340 45 0 chr2 135686986 135687274 -115000580 - L1ME4a LINE L1 -203 5918 5618 471 156 62 8 chr2 135689584 135689705 -114998149 - MLT1C LTR MaLR -313 154 22 934 294 142 77 chr2 135689776 135690796 -114997058 + L3 LINE CR1 420 1506 -71 183 345 172 35 chr2 135691472 135691588 -114996266 - L2 LINE L2 0 3272 3141 1561 165 12 0 chr2 135691809 135692058 -114995796 + AluJb SINE Alu 50 301 -11 852 139 31 0 chr2 135692914 135693043 -114994811 + FLAM_C SINE Alu 1 133 0 745 110 16 44 chr2 135693061 135693243 -114994611 + (GGGAA)n Simple_repeat Simple_repeat 1 177 0 185 287 0 11 chr2 135693222 135693309 -114994545 + GA-rich Low_complexity Low_complexity 1 86 0 * 220 319 14 0 chr2 135693834 135693903 -114993951 + CT-rich Low_complexity Low_complexity 1 70 0 690 278 40 16 chr2 135694078 135694330 -114993524 + MIR SINE MIR 2 259 -3 513 0 0 0 chr2 135696289 135696346 -114991508 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 321 47 0 0 chr2 135699577 135699620 -114988234 + (TG)n Simple_repeat Simple_repeat 2 44 0 222 200 55 18 chr2 135699807 135699862 -114987992 - MIR SINE MIR -32 230 174 2457 78 0 0 chr2 135699964 135700271 -114987583 - AluY SINE Alu -4 307 1 603 328 50 8 chr2 135702783 135703021 -114984833 - MIR SINE MIR 0 262 15 2301 105 0 0 chr2 135703323 135703627 -114984227 - AluY SINE Alu -6 305 2 184 258 65 0 chr2 135703678 135703740 -114984114 - L2 LINE L2 -51 3262 3197 193 264 101 62 chr2 135703974 135704152 -114983702 - L2 LINE L2 -216 3056 2872 484 296 13 26 chr2 135704346 135704498 -114983356 + MER5B DNA MER1_type 29 178 0 232 390 66 11 chr2 135704519 135704793 -114983061 - L2 LINE L2 -701 2613 2325 278 182 0 0 chr2 135704939 135704994 -114982860 - MER3 DNA MER1_type -5 204 150 289 268 14 14 chr2 135705936 135706007 -114981847 - L2 LINE L2 -3 3269 3199 888 246 35 26 chr2 135706057 135706289 -114981565 - MIR SINE MIR -26 236 3 385 242 50 0 chr2 135707654 135707774 -114980080 + L1ME LINE L1 5557 5682 -439 379 315 8 46 chr2 135707911 135708041 -114979813 - L2 LINE L2 -4 3268 3144 237 211 0 0 chr2 135709662 135709719 -114978135 + CT-rich Low_complexity Low_complexity 1 57 0 5109 149 9 79 chr2 135709941 135711406 -114976448 + L1PA16 LINE L1 4765 6165 -1 675 330 102 6 chr2 135711460 135711987 -114975867 - L1MC4a LINE L1 -1921 5956 5379 23 68 0 0 chr2 135712348 135712392 -114975462 + AT_rich Low_complexity Low_complexity 1 44 0 358 312 111 74 chr2 135712418 135713283 -114974571 - L1MC4a LINE L1 -1319 4896 3591 277 243 20 47 chr2 135713452 135713600 -114974254 - L1MC4a LINE L1 -2842 3373 3230 180 241 181 65 chr2 135713602 135713801 -114974053 + L2 LINE L2 2944 3165 -148 1024 126 66 30 chr2 135713807 135714005 -114973849 - L1MC3 LINE L1 -3 7782 7578 1059 206 32 40 chr2 135714024 135714276 -114973578 - L1 LINE L1 -2315 3831 3582 258 245 117 20 chr2 135714290 135714420 -114973434 - L1MC4a LINE L1 -3091 3124 2967 2256 103 0 0 chr2 135714420 135714710 -114973144 - AluSg SINE Alu -20 290 1 258 245 117 20 chr2 135714710 135714775 -114973079 - L1MC4a LINE L1 -3248 2967 2910 224 306 61 0 chr2 135715334 135715432 -114972422 + L2 LINE L2 2264 2367 -947 329 272 218 27 chr2 135715883 135716030 -114971824 - MER5A DNA MER1_type -6 183 9 340 261 54 0 chr2 135716341 135716433 -114971421 - MER81 DNA DNA -2 112 16 379 296 66 28 chr2 135719825 135720038 -114967816 + MIR SINE MIR 36 256 -6 1906 200 97 23 chr2 135720085 135720570 -114967284 - L1MB8 LINE L1 -5 6173 5653 269 350 34 34 chr2 135721232 135721349 -114966505 - Charlie8 DNA MER1_type -2299 118 2 208 371 57 31 chr2 135721369 135721528 -114966326 + MIR3 SINE MIR 32 194 -14 418 200 150 21 chr2 135721638 135721778 -114966076 - L1MC4a LINE L1 -4665 1731 1574 278 341 91 23 chr2 135722266 135722442 -114965412 - MIR SINE MIR -26 236 49 802 326 70 22 chr2 135722618 135723032 -114964822 - L3b LINE CR1 -21 1562 1129 305 300 58 17 chr2 135724450 135724570 -114963284 + L2 LINE L2 3187 3311 -2 785 213 33 96 chr2 135726819 135727091 -114960763 - MER102b DNA MER1_type -10 331 77 856 178 33 0 chr2 135727104 135727256 -114960598 - L1MD2 LINE L1 -22 6337 6181 1710 193 42 8 chr2 135728282 135728635 -114959219 - MLT1A1 LTR MaLR 0 365 1 195 283 80 26 chr2 135729459 135729572 -114958282 + MIR3 SINE MIR 56 174 -34 * 333 232 10 61 chr2 135729562 135729661 -114958193 - MIR SINE MIR -109 153 60 441 219 32 84 chr2 135729756 135729911 -114957943 - MER5B DNA MER1_type -25 153 7 830 217 69 0 chr2 135729925 135730100 -114957754 - MER5A DNA MER1_type 0 189 3 355 266 39 65 chr2 135730136 135730290 -114957564 - MIR SINE MIR -10 252 103 253 333 0 0 chr2 135730927 135731014 -114956840 - Charlie4 DNA MER1_type -6 1955 1869 242 266 94 31 chr2 135731658 135731786 -114956068 - MLT1H LTR MaLR -8 541 406 220 385 43 8 chr2 135732569 135732686 -114955168 + MIR3 SINE MIR 40 160 -48 289 219 31 0 chr2 135734797 135734861 -114952993 - L2 LINE L2 -3 3310 3245 530 275 23 0 chr2 135734888 135735019 -114952835 - L2 LINE L2 -351 2963 2830 3383 202 15 3 chr2 135735025 135735639 -114952215 - MER82 DNA MER2_type -23 630 10 259 330 50 45 chr2 135735653 135735832 -114952022 - L2 LINE L2 -491 2823 2644 1742 154 39 39 chr2 135736047 135736385 -114951469 + MER44D DNA MER2_type 1 608 -1 261 0 0 0 chr2 135736783 135736812 -114951042 + (CA)n Simple_repeat Simple_repeat 2 30 0 2595 157 36 7 chr2 135737801 135738215 -114949639 - MSTB LTR MaLR 0 426 1 2155 220 96 96 chr2 135739068 135739878 -114947976 - MER21B LTR ERV1 -53 810 1 1034 226 63 84 chr2 135739959 135740436 -114947418 - MLT1C LTR MaLR 0 467 1 1036 101 0 0 chr2 135742256 135742394 -114945460 - L1PA8 LINE L1 -4 6168 6031 232 299 30 0 chr2 135742865 135742932 -114944922 - MER91A DNA MER1_type 0 196 128 267 260 180 0 chr2 135742970 135743070 -114944784 - MER91B DNA MER1_type -70 120 3 193 303 34 34 chr2 135743761 135743850 -114944004 - MIR SINE MIR -173 89 1 1370 158 75 16 chr2 135743895 135744148 -114943706 + MLT1C LTR MaLR 1 268 -199 280 111 0 0 chr2 135744143 135744179 -114943675 + MLT1C LTR MaLR 432 467 0 * 1859 155 7 7 chr2 135744752 135745042 -114942812 + AluJo SINE Alu 1 290 -22 220 288 82 0 chr2 135745656 135745729 -114942125 - MIR SINE MIR -1 261 183 299 300 24 106 chr2 135748042 135748212 -114939642 - L2 LINE L2 0 3272 3117 1970 186 9 14 chr2 135748234 135748584 -114939270 - MER7A DNA MER2_type 0 346 1 317 312 201 47 chr2 135748814 135749300 -114938554 - L2 LINE L2 -491 2823 2227 931 119 0 179 chr2 135749300 135749535 -114938319 + 7SK RNA RNA 1 193 0 317 312 201 47 chr2 135749535 135749644 -114938210 - L2 LINE L2 -1087 2227 2136 184 340 0 0 chr2 135749696 135749743 -114938111 + L2 LINE L2 3249 3295 -18 456 281 16 8 chr2 135749825 135749946 -114937908 - MER5B DNA MER1_type 0 178 57 276 222 79 0 chr2 135749977 135750040 -114937814 + MER5B DNA MER1_type 110 177 -1 42671 57 8 1 chr2 135751512 135757624 -114930230 + L1PA5 LINE L1 2 6148 -6 614 296 96 90 chr2 135757746 135758713 -114929141 - L2 LINE L2 -1 3271 2311 346 282 76 23 chr2 135759012 135759143 -114928711 + MIR3 SINE MIR 65 202 -6 429 293 64 37 chr2 135759338 135759526 -114928328 + MER117 DNA MER1_type 2 194 -3 426 291 26 0 chr2 135759879 135759996 -114927858 - MER5A DNA MER1_type -2 187 68 433 207 0 124 chr2 135760980 135761125 -114926729 - L2 LINE L2 -1 3312 3186 296 231 11 0 chr2 135762437 135762528 -114925326 + MER113 DNA MER1_type? 6 97 -424 451 389 93 20 chr2 135763931 135764371 -114923483 - L2 LINE L2 -442 2872 2401 2944 108 0 2 chr2 135764841 135765267 -114922587 + L1PA12 LINE L1 5744 6168 0 699 121 57 8 chr2 135765948 135766072 -114921782 - L1MC1 LINE L1 -1 6332 6203 3130 136 70 3 chr2 135766115 135766705 -114921149 - L1MC1 LINE L1 -79 6254 5626 1957 241 11 23 chr2 135766725 135767338 -114920516 - L1MC1 LINE L1 -1108 5038 4433 1987 136 4 0 chr2 135767338 135767617 -114920237 + AluSx SINE Alu 1 280 -32 263 164 0 55 chr2 135769081 135769136 -114918718 - L2 LINE L2 -1 3312 3261 23 54 0 0 chr2 135769959 135769996 -114917858 + AT_rich Low_complexity Low_complexity 1 37 0 262 374 16 16 chr2 135772048 135772171 -114915683 + MIR3 SINE MIR 4 126 -82 388 256 22 22 chr2 135772221 135772358 -114915496 - L1ME4a LINE L1 -3 6118 5982 277 295 32 26 chr2 135772641 135772769 -114915085 - Tigger8 DNA MER2_type -200 466 335 867 231 52 75 chr2 135772769 135773115 -114914739 + MER46C DNA MER2_type 1 338 0 277 295 32 26 chr2 135773115 135773176 -114914678 - Tigger8 DNA MER2_type -331 335 276 195 42 0 0 chr2 135773191 135773215 -114914639 + (CAA)n Simple_repeat Simple_repeat 2 25 0 314 291 121 18 chr2 135773682 135773905 -114913949 - L1ME4a LINE L1 -336 5785 5540 2095 135 3 0 chr2 135774095 135774392 -114913462 + AluSx SINE Alu 1 298 -14 180 0 0 0 chr2 135775152 135775172 -114912682 + (TG)n Simple_repeat Simple_repeat 2 21 0 207 69 0 0 chr2 135775558 135775587 -114912267 + (TG)n Simple_repeat Simple_repeat 2 30 0 1912 157 13 3 chr2 135775646 135775945 -114911909 + AluJb SINE Alu 1 302 -10 840 233 24 24 chr2 135775945 135776194 -114911660 + L1MC4a LINE L1 7315 7563 -245 433 234 16 0 chr2 135776205 135776333 -114911521 + L1MD3 LINE L1 7866 7995 0 671 289 60 4 chr2 135776464 135776588 -114911266 + MIR SINE MIR 15 131 -131 305 61 0 41 chr2 135776588 135776637 -114911217 + (ATG)n Simple_repeat Simple_repeat 2 48 0 671 289 60 4 chr2 135776637 135776744 -114911110 + MIR SINE MIR 131 259 -3 190 329 55 14 chr2 135776805 135776878 -114910976 + MIR SINE MIR 164 239 -23 252 143 0 0 chr2 135776903 135776945 -114910909 + (TCCA)n Simple_repeat Simple_repeat 1 42 0 766 210 25 50 chr2 135777231 135777431 -114910423 - MER58A DNA MER1_type 0 224 30 2104 78 0 44 chr2 135777631 135777948 -114909906 + AluY SINE Alu 1 304 0 212 319 137 48 chr2 135777960 135778208 -114909646 - L3 LINE CR1 -1123 454 185 1414 192 14 27 chr2 135782111 135782403 -114905451 - AluJo SINE Alu -24 288 1 374 352 72 62 chr2 135782608 135783030 -114904824 - L2 LINE L2 -225 3047 2619 483 48 0 0 chr2 135783361 135783423 -114904431 + (TG)n Simple_repeat Simple_repeat 1 62 0 295 331 55 0 chr2 135783523 135783650 -114904204 - L2 LINE L2 0 3313 3180 1780 181 3 0 chr2 135784470 135784773 -114903081 + AluJb SINE Alu 1 304 -8 205 306 0 0 chr2 135786256 135786277 -114901577 + A-rich Low_complexity Low_complexity 4 24 -41 748 177 8 0 chr2 135786277 135786407 -114901447 + FLAM_A SINE Alu 1 131 -2 205 306 0 0 chr2 135786407 135786447 -114901407 + A-rich Low_complexity Low_complexity 23 65 0 3205 139 76 13 chr2 135786545 135787225 -114900629 - LTR1B LTR ERV1 -33 793 1 768 290 101 22 chr2 135788310 135789042 -114898812 - L2 LINE L2 -4 3309 2366 307 274 102 118 chr2 135789152 135789407 -114898447 - MIR SINE MIR 0 262 12 278 364 38 59 chr2 135789531 135790004 -114897850 - L2 LINE L2 -2 3270 2808 231 243 99 81 chr2 135790019 135790130 -114897724 + MER94 DNA DNA 3 115 -19 238 297 27 0 chr2 135790149 135790223 -114897631 - L2 LINE L2 -514 2800 2725 1607 230 0 3 chr2 135790267 135790567 -114897287 - AluJo SINE Alu -13 299 1 471 206 63 29 chr2 135790619 135790794 -114897060 + L1MD3 LINE L1 7812 7992 -3 193 374 102 0 chr2 135790796 135790962 -114896892 - L2 LINE L2 -620 2694 2512 22 0 0 0 chr2 135792023 135792045 -114895809 + AT_rich Low_complexity Low_complexity 1 22 0 251 71 24 0 chr2 135793084 135793126 -114894728 + (TTATA)n Simple_repeat Simple_repeat 3 45 0 2251 114 3 0 chr2 135793127 135793425 -114894429 - AluSp SINE Alu -14 299 1 226 163 0 0 chr2 135793551 135793594 -114894260 - L1ME4a LINE L1 -124 5997 5955 354 343 128 48 chr2 135794153 135794550 -114893304 + L2 LINE L2 87 515 -2799 338 330 8 0 chr2 135794556 135794674 -114893180 - L2 LINE L2 -706 2608 2490 317 313 166 24 chr2 135794700 135795080 -114892774 + L2 LINE L2 554 987 -2327 411 288 25 2 chr2 135795095 135795219 -114892635 + MER5B DNA MER1_type 61 178 0 406 154 64 13 chr2 135795446 135795524 -114892330 - SVA Other Other -860 526 445 1064 291 38 47 chr2 135795718 135796164 -114891690 + L2 LINE L2 2215 2656 -658 2075 138 7 7 chr2 135796273 135796571 -114891283 - AluSx SINE Alu -14 298 1 491 269 81 47 chr2 135796589 135796717 -114891137 + L2 LINE L2 2999 3121 -192 624 229 126 0 chr2 135796717 135796900 -114890954 - MER63A DNA MER1_type -4 206 1 491 269 81 47 chr2 135796900 135797069 -114890785 + L2 LINE L2 3121 3306 -7 264 77 0 0 chr2 135797073 135797112 -114890742 + (TGGA)n Simple_repeat Simple_repeat 4 42 0 395 243 19 10 chr2 135798323 135798426 -114889428 + MER5A DNA MER1_type 7 110 -79 2174 61 0 4 chr2 135798492 135798753 -114889101 + AluY SINE Alu 35 294 -17 317 189 0 14 chr2 135798802 135798876 -114888978 + MER116 DNA Mariner 1 73 -7 2021 132 0 38 chr2 135801652 135801971 -114885883 - AluSx SINE Alu -5 307 1 1807 161 6 45 chr2 135802863 135803216 -114884638 - MLT1B LTR MaLR -2 388 50 183 287 83 46 chr2 135803409 135803517 -114884337 - MIR SINE MIR -130 132 21 229 352 55 0 chr2 135803929 135804020 -114883834 - MIR SINE MIR -60 148 53 363 335 93 5 chr2 135804314 135804508 -114883346 + MIR SINE MIR 20 230 -32 433 344 63 43 chr2 135805452 135805705 -114882149 + MIR SINE MIR 5 262 0 223 327 19 56 chr2 135806104 135806211 -114881643 + MIR3 SINE MIR 12 114 -94 882 265 0 0 chr2 135806403 135806599 -114881255 - MIR SINE MIR -54 208 13 494 170 96 0 chr2 135806770 135806864 -114880990 - U6 snRNA snRNA -4 103 1 239 374 28 0 chr2 135807800 135807907 -114879947 + MIR SINE MIR 38 147 -61 212 233 0 0 chr2 135809610 135809653 -114878201 + (CA)n Simple_repeat Simple_repeat 2 44 0 207 309 48 32 chr2 135809657 135809783 -114878071 + MIR SINE MIR 119 246 -16 1701 181 3 26 chr2 135809784 135810088 -114877766 - AluJo SINE Alu -15 297 1 29 60 0 0 chr2 135810248 135810298 -114877556 + AT_rich Low_complexity Low_complexity 1 50 0 1841 142 6 61 chr2 135810311 135810641 -114877213 + AluJb SINE Alu 1 312 0 31 26 0 0 chr2 135811939 135811977 -114875877 + AT_rich Low_complexity Low_complexity 1 38 0 605 182 54 7 chr2 135812687 135812835 -114875019 - MER20 DNA MER1_type -9 210 56 336 308 89 35 chr2 135813525 135813694 -114874160 - MER5B DNA MER1_type 0 178 1 415 286 80 29 chr2 135813720 135813895 -114873959 - MER5A DNA MER1_type -2 187 4 2270 106 0 10 chr2 135814210 135814522 -114873332 - AluSc SINE Alu 0 309 1 243 260 125 31 chr2 135815561 135815657 -114872197 + L2 LINE L2 3166 3270 -2 2129 110 41 0 chr2 135815688 135815980 -114871874 + AluSx SINE Alu 1 304 -8 251 227 171 80 chr2 135817700 135817721 -114870133 - MIR3 SINE MIR -32 176 158 998 162 21 37 chr2 135817721 135817912 -114869942 + MER5A DNA MER1_type 2 189 0 251 227 171 80 chr2 135817912 135817978 -114869876 - MIR3 SINE MIR -50 158 81 194 245 20 0 chr2 135818141 135818190 -114869664 + MIR SINE MIR 99 148 -114 364 304 10 0 chr2 135819807 135819909 -114867945 - MER81 DNA DNA 0 114 12 2280 77 47 0 chr2 135819952 135820249 -114867605 - AluY SINE Alu 0 311 1 694 214 55 22 chr2 135821608 135821790 -114866064 - MER5A DNA MER1_type -1 188 1 259 228 81 106 chr2 135824569 135824692 -114863162 + MER5A DNA MER1_type 7 126 -63 203 310 70 63 chr2 135824617 135824759 -114863095 - MER5A DNA MER1_type -44 145 3 * 1434 272 192 21 chr2 135824828 135826089 -114861765 + L2 LINE L2 1803 3313 0 843 201 24 0 chr2 135826182 135826346 -114861508 + MER5A DNA MER1_type 1 168 -21 186 310 56 70 chr2 135826473 135826615 -114861239 - L2 LINE L2 -377 2937 2798 348 212 136 25 chr2 135827667 135827785 -114860069 + MIR SINE MIR 82 212 -50 308 188 45 62 chr2 135827914 135828026 -114859828 - MLT1J LTR MaLR -15 496 387 483 240 55 75 chr2 135828154 135828354 -114859500 - MLT1J LTR MaLR -308 203 8 293 182 0 18 chr2 135828838 135828893 -114858961 + MER21B LTR ERV1 15 68 -795 288 235 0 15 chr2 135828925 135828993 -114858861 + MER21B LTR ERV1 19 85 -778 3651 208 49 9 chr2 135828997 135829768 -114858086 + MER21B LTR ERV1 43 844 -19 270 273 39 13 chr2 135829927 135830004 -114857850 - L2 LINE L2 -1 3271 3193 506 310 107 30 chr2 135831561 135831688 -114856166 - L1ME4a LINE L1 -175 5946 5830 2860 16 0 6 chr2 135831688 135832008 -114855846 + AluYb8 SINE Alu 1 318 0 506 310 107 30 chr2 135832008 135832245 -114855609 - L1ME4a LINE L1 -291 5830 5554 2744 23 0 0 chr2 135832310 135832618 -114855236 + AluYa5 SINE Alu 1 308 -3 238 266 32 21 chr2 135832980 135833074 -114854780 - HAL1b LINE L1 -758 590 496 579 301 53 35 chr2 135835233 135835459 -114852395 - MIR SINE MIR -24 238 9 1007 292 108 13 chr2 135835535 135835998 -114851856 + L2 LINE L2 2806 3312 -1 22 0 0 0 chr2 135837142 135837164 -114850690 + AT_rich Low_complexity Low_complexity 1 22 0 203 291 13 0 chr2 135837443 135837522 -114850332 - MIR3 SINE MIR -1 207 128 280 40 40 20 chr2 135837869 135837919 -114849935 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 17377 22 2 0 chr2 135837919 135840826 -114847028 - L1HS LINE L1 -16 6139 3227 2106 97 0 14 chr2 135840944 135841232 -114846622 - AluSq SINE Alu -29 284 1 243 0 0 0 chr2 135841630 135841657 -114846197 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 575 35 0 59 chr2 135841660 135841745 -114846109 - L1PA5 LINE L1 -6 6148 6069 396 0 0 0 chr2 135843486 135843530 -114844324 + (CA)n Simple_repeat Simple_repeat 2 45 0 270 311 143 12 chr2 135843885 135844046 -114843808 + MIR3 SINE MIR 16 197 -11 1787 168 8 94 chr2 135844264 135844740 -114843114 - LTR8 LTR ERV1 -107 584 150 748 186 136 40 chr2 135844912 135845111 -114842743 - MER20 DNA MER1_type -1 218 1 351 233 0 35 chr2 135845210 135845326 -114842528 + MER103 DNA DNA 4 115 -51 27 29 0 0 chr2 135845333 135845367 -114842487 + AT_rich Low_complexity Low_complexity 1 34 0 235 278 21 90 chr2 135847567 135847711 -114840143 - L2 LINE L2 -165 3107 2974 1326 163 118 45 chr2 135849679 135849968 -114837886 + AluJo SINE Alu 3 312 0 1848 131 139 68 chr2 135850612 135850963 -114836891 + MSTA LTR MaLR 3 328 -100 246 32 0 0 chr2 135850963 135850994 -114836860 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1491 125 213 0 chr2 135850997 135851237 -114836617 - AluSx SINE Alu -21 291 1 1848 131 139 68 chr2 135851237 135851277 -114836577 + MSTA LTR MaLR 329 426 -2 385 304 47 27 chr2 135851639 135851787 -114836067 + MIR3 SINE MIR 51 201 -7 374 327 97 35 chr2 135853362 135853588 -114834266 + L3 LINE CR1 1049 1288 -289 320 312 83 18 chr2 135853643 135853752 -114834102 + L3 LINE CR1 1425 1540 -37 454 314 72 49 chr2 135853776 135854040 -114833814 - L3 LINE CR1 -237 1340 1071 2300 80 7 10 chr2 135854401 135854700 -114833154 + AluY SINE Alu 1 298 -13 2513 67 0 0 chr2 135856461 135856759 -114831095 + AluSx SINE Alu 1 298 -14 509 208 112 0 chr2 135858134 135858259 -114829595 - MIR SINE MIR -26 236 98 947 290 80 6 chr2 135858313 135858665 -114829189 + MLT1I LTR MaLR 22 399 -10 644 255 80 38 chr2 135859453 135859665 -114828189 - MER58A DNA MER1_type -3 221 1 772 146 0 22 chr2 135859834 135859997 -114827857 + AluJb SINE Alu 170 312 0 1373 286 23 5 chr2 135861327 135861761 -114826093 - L1MC/D LINE L1 -2097 5711 5270 23 0 0 0 chr2 135861846 135861869 -114825985 + AT_rich Low_complexity Low_complexity 1 23 0 1850 232 49 20 chr2 135861898 135862389 -114825465 + MLT1D LTR MaLR 1 505 0 802 314 80 32 chr2 135862532 135863905 -114823949 - L1MC/D LINE L1 -1119 5027 3596 2336 153 27 14 chr2 135864171 135864610 -114823244 - Tigger2 DNA MER2_type -1 2717 2273 378 143 14 29 chr2 135864600 135864670 -114823184 - Tigger2 DNA MER2_type -2649 69 1 * 26 0 0 0 chr2 135864839 135864865 -114822989 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr2 135865010 135865040 -114822814 + AT_rich Low_complexity Low_complexity 1 30 0 542 247 75 4 chr2 135865246 135865511 -114822343 - L1ME LINE L1 -614 5548 5258 344 281 59 26 chr2 135865649 135865919 -114821935 - L1ME LINE L1 -1079 5067 4789 383 292 135 50 chr2 135865999 135866362 -114821492 - L1ME LINE L1 -1463 4683 4290 502 293 70 100 chr2 135866473 135866991 -114820863 - L1ME LINE L1 -2038 4108 3607 207 258 0 32 chr2 135866991 135867053 -114820801 + CT-rich Low_complexity Low_complexity 3 62 0 3785 169 54 4 chr2 135867143 135867925 -114819929 + L1MB8 LINE L1 5286 6106 -72 383 249 109 12 chr2 135868396 135868561 -114819293 - L1ME LINE L1 -3133 3013 2833 437 248 113 40 chr2 135868694 135869117 -114818737 - L1MC5 LINE L1 -227 7734 7281 1653 117 109 15 chr2 135869245 135869333 -114818521 - MER51A LTR ERV1 0 634 556 2345 78 0 41 chr2 135869333 135869652 -114818202 + AluY SINE Alu 1 306 -5 1653 117 109 15 chr2 135869652 135870070 -114817784 - MER51A LTR ERV1 -78 556 1 297 256 22 11 chr2 135870078 135870168 -114817686 - L1MC4 LINE L1 -792 7250 7160 379 202 67 10 chr2 135870248 135870352 -114817502 - L1ME1 LINE L1 -4 6162 6053 222 240 0 80 chr2 135870401 135870476 -114817378 - MIR SINE MIR 0 262 194 1714 270 105 23 chr2 135870492 135871386 -114816468 + L2 LINE L2 2321 3299 -14 2429 31 41 0 chr2 135871795 135872085 -114815769 + AluY SINE Alu 1 302 -9 313 254 90 99 chr2 135873940 135874141 -114813713 + L1M2 LINE L1 779 977 -5872 368 324 88 19 chr2 135878054 135878262 -114809592 + MIR SINE MIR 34 254 -8 1957 155 0 19 chr2 135879000 135879316 -114808538 - AluJb SINE Alu -2 310 1 22 35 0 0 chr2 135881151 135881180 -114806674 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 135882560 135882581 -114805273 + AT_rich Low_complexity Low_complexity 1 21 0 185 369 58 19 chr2 135882599 135882702 -114805152 - MIR SINE MIR -154 108 2 30 27 0 0 chr2 135882713 135882750 -114805104 + AT_rich Low_complexity Low_complexity 1 37 0 268 263 250 32 chr2 135882840 135882996 -114804858 + MIR SINE MIR 18 207 -55 666 260 141 46 chr2 135883050 135883559 -114804295 - MLT1H1 LTR MaLR -8 547 1 311 316 20 0 chr2 135883903 135884001 -114803853 - MIR SINE MIR -115 147 48 232 346 22 66 chr2 135884228 135884364 -114803490 + MIR SINE MIR 127 256 -6 274 398 111 22 chr2 135885245 135885569 -114802285 - L3b LINE CR1 -39 1544 1192 26 0 0 0 chr2 135885605 135885631 -114802223 + AT_rich Low_complexity Low_complexity 1 26 0 1194 176 0 0 chr2 135886295 135886505 -114801349 + MER2 DNA MER2_type 1 210 -135 233 267 0 0 chr2 135886556 135886616 -114801238 + MER2 DNA MER2_type 279 338 -7 1633 187 28 0 chr2 135886652 135886968 -114800886 - AluJb SINE Alu 0 312 1 342 0 0 0 chr2 135887587 135887625 -114800229 + (TAA)n Simple_repeat Simple_repeat 2 39 0 327 344 73 66 chr2 135887724 135888012 -114799842 + L2 LINE L2 2977 3266 -6 1697 236 107 5 chr2 135888075 135888515 -114799339 - MLT1D LTR MaLR 0 505 21 454 325 13 6 chr2 135888925 135889082 -114798772 - MIR3 SINE MIR -15 193 36 265 261 59 34 chr2 135891144 135891263 -114796591 + MER112 DNA MER1_type 128 249 -11 1086 266 144 48 chr2 135891991 135892614 -114795240 - L1ME3A LINE L1 -10 6160 5478 410 312 52 57 chr2 135892702 135893125 -114794729 - L1ME3A LINE L1 -1052 5094 4674 240 35 0 0 chr2 135895355 135895384 -114792470 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2350 100 6 3 chr2 135895475 135895786 -114792068 - AluSq SINE Alu -1 312 1 341 292 146 8 chr2 135899989 135900119 -114787735 + L2 LINE L2 3125 3272 0 808 73 0 0 chr2 135900566 135900675 -114787179 - L1PA5 LINE L1 -3 6151 6043 317 132 0 0 chr2 135900675 135900728 -114787126 + L1PA5 LINE L1 6000 6052 -102 2325 201 87 47 chr2 135901245 135901526 -114786328 + MER82 DNA MER2_type 8 276 -377 1506 158 9 80 chr2 135901526 135901694 -114786160 - AluJb SINE Alu 0 312 178 2224 107 3 13 chr2 135901694 135902002 -114785852 - AluSp SINE Alu -8 305 1 1506 158 9 80 chr2 135902002 135902169 -114785685 - AluJb SINE Alu -134 178 1 2325 201 87 47 chr2 135902169 135902508 -114785346 + MER82 DNA MER2_type 276 653 0 184 218 36 36 chr2 135902508 135902563 -114785291 - MIR SINE MIR -111 151 97 219 306 0 14 chr2 135903868 135903940 -114783914 + MIR SINE MIR 175 245 -17 23 33 0 0 chr2 135905328 135905358 -114782496 + AT_rich Low_complexity Low_complexity 1 30 0 511 184 133 10 chr2 135905358 135905456 -114782398 - FLAM_A SINE Alu -21 121 12 226 224 35 0 chr2 135907247 135907305 -114780549 - MIR SINE MIR -47 215 156 680 323 83 3 chr2 135907325 135907650 -114780204 - MLT1I LTR MaLR 0 409 59 275 177 16 109 chr2 135907670 135907786 -114780068 - MIR SINE MIR -68 140 34 795 210 148 18 chr2 135907912 135908141 -114779713 + MIR SINE MIR 3 261 -1 188 333 17 17 chr2 135910574 135910634 -114777220 + L2 LINE L2 3025 3084 -188 1826 175 111 9 chr2 135910767 135911008 -114776846 - MLT1C LTR MaLR 0 467 252 333 0 0 0 chr2 135911008 135911045 -114776809 + (TG)n Simple_repeat Simple_repeat 2 38 0 1826 175 111 9 chr2 135911045 135911225 -114776629 - MLT1C LTR MaLR -215 252 3 280 282 105 40 chr2 135911246 135911370 -114776484 + L2 LINE L2 3137 3268 -4 1652 177 0 37 chr2 135911409 135911556 -114776298 + AluJo SINE Alu 1 133 -179 2172 85 13 41 chr2 135911556 135911873 -114775981 + AluSc SINE Alu 1 308 -1 1652 177 0 37 chr2 135911873 135912025 -114775829 + AluJo SINE Alu 133 289 -23 198 171 0 0 chr2 135913446 135913487 -114774367 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 319 204 19 157 chr2 135914956 135915064 -114772790 + Charlie1b DNA MER1_type 14 106 -417 1556 194 69 29 chr2 135915106 135915524 -114772330 + Charlie1b DNA MER1_type 80 514 -9 516 202 79 9 chr2 135915538 135915652 -114772202 + MIR SINE MIR 140 261 -1 246 312 75 32 chr2 135916100 135916193 -114771661 + L2 LINE L2 3175 3271 -1 1744 181 72 76 chr2 135919096 135919611 -114768243 + Charlie1b DNA MER1_type 6 518 -5 379 259 59 7 chr2 135920295 135920430 -114767424 + L1ME3A LINE L1 6027 6168 -2 21 36 0 0 chr2 135920650 135920678 -114767176 + AT_rich Low_complexity Low_complexity 1 28 0 986 287 102 28 chr2 135920720 135921365 -114766489 - HAL1 LINE L1 -5 2502 1810 1212 237 96 7 chr2 135921462 135921867 -114765987 - L1M4 LINE L1 -1562 4584 4144 1041 250 57 17 chr2 135921880 135922339 -114765515 - L1ME3A LINE L1 -220 5949 1 507 302 84 8 chr2 135923226 135923447 -114764407 + MIR SINE MIR 30 262 0 1897 115 0 0 chr2 135924983 135925236 -114762618 + AluSq SINE Alu 1 253 -60 266 356 19 0 chr2 135925435 135925539 -114762315 + MIR3 SINE MIR 49 154 -54 627 266 128 75 chr2 135925915 135926159 -114761695 - L2 LINE L2 0 3313 3083 1541 177 8 4 chr2 135926159 135926419 -114761435 + AluJb SINE Alu 39 299 -13 627 266 128 75 chr2 135926419 135926644 -114761210 - L2 LINE L2 -230 3083 2819 202 298 69 99 chr2 135927012 135927143 -114760711 - L3b LINE CR1 -172 1411 1285 13196 213 49 11 chr2 135927399 135930437 -114757417 - L1P4 LINE L1 -385 5781 2572 514 274 0 0 chr2 135930437 135930554 -114757300 + FLAM_A SINE Alu 2 118 -15 13196 213 49 11 chr2 135930554 135931226 -114756628 - L1P4 LINE L1 -3594 2572 1927 * 16276 53 7 1 chr2 135931220 135933304 -114754550 + L1P LINE L1 2397 4494 -1652 369 93 0 0 chr2 135933504 135933558 -114754296 + (TTATA)n Simple_repeat Simple_repeat 2 55 0 1997 133 11 0 chr2 135933561 135933846 -114754008 - AluSq SINE Alu -25 288 1 1121 174 95 4 chr2 135933859 135934101 -114753753 - L1MD3 LINE L1 0 7995 7732 192 40 0 0 chr2 135934256 135934281 -114753573 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 309 285 87 29 chr2 135934593 135934765 -114753089 - L1M4 LINE L1 -1065 5081 4900 2738 158 161 121 chr2 135934929 135935383 -114752471 - L1MC3 LINE L1 -40 7745 7311 1738 184 3 0 chr2 135935383 135935676 -114752178 - AluJb SINE Alu -18 294 1 2738 158 161 121 chr2 135935676 135935784 -114752070 - L1MC3 LINE L1 -474 7311 7209 274 295 0 11 chr2 135935784 135935879 -114751975 - MLT1F1 LTR MaLR -450 117 24 2738 158 161 121 chr2 135935879 135936056 -114751798 - L1MC3 LINE L1 -576 7209 7041 240 35 0 0 chr2 135936056 135936085 -114751769 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2738 158 161 121 chr2 135936085 135936252 -114751602 - L1MC3 LINE L1 -744 7041 6703 497 320 70 32 chr2 135936278 135936386 -114751468 + L1MC/D LINE L1 3797 3899 -2247 4210 160 67 69 chr2 135936386 135937459 -114750395 - MER11C LTR ERVK 0 1071 1 497 320 70 32 chr2 135937459 135937694 -114750160 + L1MC/D LINE L1 3899 4153 -1993 492 288 89 34 chr2 135937864 135938301 -114749553 + L1MC/D LINE L1 4387 4847 -1299 380 81 0 32 chr2 135938379 135938441 -114749413 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 1645 167 4 14 chr2 135938445 135938726 -114749128 - AluJb SINE Alu -34 278 1 419 312 116 29 chr2 135938879 135939257 -114748597 + L1MC/D LINE L1 5410 5820 -1988 7336 52 0 3 chr2 135940180 135941888 -114745966 - L1PA5 LINE L1 0 6154 4450 1477 238 39 39 chr2 135942023 135942349 -114745505 - L1ME2 LINE L1 -7 6157 5829 1825 223 115 12 chr2 135942349 135942843 -114745011 + MER44D DNA MER2_type 5 604 -1 1477 238 39 39 chr2 135942843 135943007 -114744847 - L1ME2 LINE L1 -334 5830 5667 1885 206 47 95 chr2 135943023 135943731 -114744123 - L1ME2 LINE L1 -908 5238 4565 * 1969 267 101 19 chr2 135943724 135945103 -114742751 - L1ME2 LINE L1 -210 6749 5236 1381 241 141 35 chr2 135945175 135945732 -114742122 - L1ME2 LINE L1 -4662 2279 1632 2150 117 0 3 chr2 135945732 135946023 -114741831 - AluSc SINE Alu -19 290 1 1381 241 141 35 chr2 135946023 135946380 -114741474 - L1ME2 LINE L1 -5309 1632 1314 317 295 77 69 chr2 135947506 135947855 -114739999 - L1ME2 LINE L1 -6023 400 49 277 214 20 41 chr2 135947880 135947978 -114739876 - L1M4 LINE L1 -1194 4952 4857 238 325 43 0 chr2 135948648 135948765 -114739089 - MER103 DNA DNA -10 156 35 23 33 0 0 chr2 135948963 135948993 -114738861 + AT_rich Low_complexity Low_complexity 1 30 0 251 247 25 25 chr2 135949605 135949686 -114738168 + (TATATG)n Simple_repeat Simple_repeat 4 84 0 4660 199 55 15 chr2 135950210 135951729 -114736125 - L1MD1 LINE L1 -14 6228 4639 7044 47 8 4 chr2 135951764 135953298 -114734556 - L1PA5 LINE L1 -6 6148 4608 209 319 44 9 chr2 135953491 135953604 -114734250 - L2 LINE L2 -1065 2249 2133 2174 100 3 19 chr2 135954409 135954720 -114733134 + AluSq SINE Alu 1 306 -7 2015 156 9 44 chr2 135955058 135955487 -114732367 - L1MC2 LINE L1 0 6344 5931 2060 134 39 18 chr2 135955501 135955836 -114732018 - MER7A DNA MER2_type -5 341 2 1020 122 24 0 chr2 135955836 135956000 -114731854 - L1MC2 LINE L1 -420 5924 5757 1281 227 143 38 chr2 135956004 135956507 -114731347 - MER34B LTR ERV1 -5 560 5 2153 195 54 33 chr2 135956512 135956596 -114731258 - L1MC2 LINE L1 -584 5760 5679 603 193 0 52 chr2 135956596 135956731 -114731123 - FLAM_A SINE Alu -5 128 1 2153 195 54 33 chr2 135956731 135957368 -114730486 - L1MC2 LINE L1 -665 5679 5031 1955 204 171 24 chr2 135957362 135957912 -114729942 - L1ME3A LINE L1 -5 6165 5535 * 409 235 0 31 chr2 135958122 135958220 -114729634 - Tigger7 DNA MER2_type -3 2484 2390 896 245 63 21 chr2 135958222 135958459 -114729395 - Tigger7 DNA MER2_type -469 264 18 196 330 89 0 chr2 135958762 135958874 -114728980 + L2 LINE L2 3190 3311 -2 216 381 76 13 chr2 135959389 135959625 -114728229 + L3b LINE CR1 1218 1468 -115 1776 194 41 19 chr2 135959648 135960014 -114727840 + MLT1A2 LTR MaLR 1 374 0 21 36 0 0 chr2 135960732 135960760 -114727094 + AT_rich Low_complexity Low_complexity 1 28 0 181 333 0 0 chr2 135962789 135962837 -114725017 + L3 LINE CR1 861 908 -669 1744 90 0 0 chr2 135963034 135963267 -114724587 - L1PA8 LINE L1 -1 6171 5939 41 21 0 0 chr2 135963400 135963448 -114724406 + AT_rich Low_complexity Low_complexity 1 48 0 908 234 42 0 chr2 135964168 135964382 -114723472 + MER58A DNA MER1_type 2 224 0 299 250 33 0 chr2 135964656 135964716 -114723138 + MIR SINE MIR 33 94 -168 240 186 31 62 chr2 135967669 135967830 -114720024 + (TTATA)n Simple_repeat Simple_repeat 3 158 0 213 221 73 15 chr2 135969557 135969625 -114718229 - MIR3 SINE MIR -13 195 124 1898 204 43 18 chr2 135969738 135970136 -114717718 + MER54A LTR ERVL 494 901 0 241 313 81 10 chr2 135970149 135970248 -114717606 - MIR SINE MIR -87 121 16 3598 67 40 4 chr2 135970552 135971047 -114716807 + LTR10D LTR ERV1 1 513 0 405 0 0 0 chr2 135971350 135971395 -114716459 + (CA)n Simple_repeat Simple_repeat 2 46 0 291 286 19 106 chr2 135972970 135973131 -114714723 - MIR SINE MIR -46 216 70 50 0 0 0 chr2 135973157 135973207 -114714647 + AT_rich Low_complexity Low_complexity 1 50 0 742 297 74 60 chr2 135973229 135973828 -114714026 + L2 LINE L2 2659 3259 -13 235 339 74 32 chr2 135974860 135975049 -114712805 + MIR SINE MIR 1 197 -65 2411 83 0 0 chr2 135975826 135976126 -114711728 + AluY SINE Alu 1 300 -11 324 0 0 0 chr2 135976284 135976320 -114711534 + (TG)n Simple_repeat Simple_repeat 1 36 0 2213 92 0 0 chr2 135976498 135976780 -114711074 - AluSg1 SINE Alu -13 296 15 263 151 0 0 chr2 135976963 135977016 -114710838 - L1MB4 LINE L1 -2 6178 6126 247 25 50 0 chr2 135977936 135977976 -114709878 + (CAA)n Simple_repeat Simple_repeat 1 42 0 484 321 54 12 chr2 135978439 135978607 -114709247 + MIR SINE MIR 34 208 -54 336 262 149 0 chr2 135979399 135979540 -114708314 - MIR SINE MIR -87 175 14 22 0 0 0 chr2 135979710 135979732 -114708122 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr2 135981475 135981495 -114706359 + (A)n Simple_repeat Simple_repeat 1 20 0 909 266 55 4 chr2 135981565 135981802 -114706052 + MIR SINE MIR 12 260 -2 372 250 107 9 chr2 135981989 135982101 -114705753 - MIR3 SINE MIR -36 172 50 209 319 106 21 chr2 135982133 135982227 -114705627 + MIR3 SINE MIR 10 111 -97 22 0 0 0 chr2 135982684 135982706 -114705148 + AT_rich Low_complexity Low_complexity 1 22 0 275 261 92 7 chr2 135983320 135983462 -114704392 + L1ME4a LINE L1 5762 5915 -206 217 371 19 0 chr2 135983567 135983672 -114704182 + L2 LINE L2 2948 3054 -259 550 283 83 39 chr2 135984258 135984558 -114703296 - L1ME3 LINE L1 -332 5830 5512 909 184 18 57 chr2 135984558 135984786 -114703068 - MER20 DNA MER1_type 0 219 1 550 283 83 39 chr2 135984786 135984821 -114703033 - L1ME3 LINE L1 -650 5512 5480 316 248 71 9 chr2 135985333 135985446 -114702408 - MIR SINE MIR -132 130 11 2143 142 0 32 chr2 135988507 135988851 -114699003 - MER1B DNA MER1_type -4 333 1 280 127 191 0 chr2 135989186 135989249 -114698605 + MLT1C LTR MaLR 1 75 -392 398 192 13 0 chr2 135989250 135989328 -114698526 + MER57A LTR ERV1 295 373 -30 264 122 0 0 chr2 135989328 135989369 -114698485 + (A)n Simple_repeat Simple_repeat 1 41 0 922 157 105 65 chr2 135989369 135989710 -114698144 + MLT1C LTR MaLR 64 467 0 2377 219 59 10 chr2 135990255 135990848 -114697006 - MLT1E2 LTR MaLR 0 626 5 334 313 100 57 chr2 135992830 135993130 -114694724 - L2 LINE L2 -436 2878 2566 240 274 80 44 chr2 135993304 135993417 -114694437 - L2 LINE L2 0 3313 3197 236 283 96 53 chr2 135993622 135993809 -114694045 - LTR33 LTR ERVL -22 499 305 1999 156 43 62 chr2 135993818 135994240 -114693614 - MLT2D LTR ERVL 0 414 1 496 191 36 0 chr2 135994322 135994432 -114693422 + MER5A DNA MER1_type 1 114 -75 4782 35 0 0 chr2 135994707 135995277 -114692577 + L1PA4 LINE L1 5586 6155 0 198 0 0 0 chr2 135995404 135995426 -114692428 + (A)n Simple_repeat Simple_repeat 1 22 0 2174 124 3 0 chr2 135995474 135995773 -114692081 + AluSq SINE Alu 1 300 -13 1530 159 52 4 chr2 135999322 135999593 -114688261 - AluJb SINE Alu -28 284 1 342 313 10 0 chr2 136001342 136001438 -114686416 + MIR SINE MIR 49 145 -63 2167 230 39 21 chr2 136002152 136002773 -114685081 - L1ME1 LINE L1 -32 6134 5503 545 224 31 36 chr2 136003080 136003272 -114684582 - L1MC5 LINE L1 -432 7529 7339 310 262 58 10 chr2 136003478 136003581 -114684273 + L3b LINE CR1 1354 1461 -122 345 295 44 107 chr2 136004418 136004644 -114683210 - MIR3 SINE MIR -46 216 8 796 174 33 19 chr2 136004685 136004897 -114682957 - L1MA4 LINE L1 -2 6298 6084 2154 119 6 13 chr2 136005066 136005377 -114682477 + AluSq SINE Alu 1 309 -4 233 218 0 18 chr2 136005794 136005849 -114682005 + MIR SINE MIR 200 253 -9 * 238 89 89 22 chr2 136005816 136005861 -114681993 + L2 LINE L2 3266 3313 0 32 57 0 0 chr2 136005959 136006012 -114681842 + AT_rich Low_complexity Low_complexity 1 53 0 248 292 14 28 chr2 136007123 136007195 -114680659 - L2 LINE L2 -33 3280 3210 512 290 120 0 chr2 136007212 136007395 -114680459 - MIR SINE MIR -57 205 1 563 321 72 0 chr2 136007428 136007649 -114680205 - MIR SINE MIR -6 256 20 2858 0 0 3 chr2 136007853 136008164 -114679690 - AluY SINE Alu -1 310 1 189 0 0 0 chr2 136008526 136008547 -114679307 + (TG)n Simple_repeat Simple_repeat 1 21 0 417 86 0 0 chr2 136008552 136008610 -114679244 + (TA)n Simple_repeat Simple_repeat 1 58 0 302 273 83 66 chr2 136008719 136008840 -114679014 + HAL1 LINE L1 2379 2501 -6 1118 232 138 77 chr2 136009076 136010102 -114677752 + L1MC5 LINE L1 6841 7929 -32 1313 288 89 50 chr2 136010239 136010898 -114676956 - MER115 DNA AcHobo 0 693 9 203 287 148 35 chr2 136011839 136011883 -114675971 - MIR SINE MIR -62 200 162 2345 87 0 0 chr2 136011883 136012172 -114675682 - AluY SINE Alu -17 294 6 203 287 148 35 chr2 136012172 136012242 -114675612 - MIR SINE MIR -100 162 73 1351 206 46 56 chr2 136013210 136013604 -114674250 + MLT1B LTR MaLR 1 390 0 23 0 0 0 chr2 136014795 136014818 -114673036 + AT_rich Low_complexity Low_complexity 1 23 0 1970 158 24 13 chr2 136015387 136015768 -114672086 + L1MA9 LINE L1 5710 6094 -218 195 42 0 0 chr2 136015878 136015902 -114671952 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 258 283 105 40 chr2 136016267 136016419 -114671435 + L3b LINE CR1 1249 1410 -173 310 314 76 17 chr2 136016621 136016739 -114671115 + L2 LINE L2 3134 3258 -14 205 333 10 62 chr2 136017467 136017563 -114670291 + MIR SINE MIR 54 144 -64 2030 96 0 4 chr2 136018052 136018324 -114669530 - AluY SINE Alu -5 306 36 1337 197 60 7 chr2 136020590 136020859 -114666995 - AluJo SINE Alu -29 283 1 323 345 117 0 chr2 136020949 136021094 -114666760 - MIR SINE MIR -97 165 4 366 342 107 0 chr2 136021358 136021507 -114666347 - MIR3 SINE MIR -13 195 31 414 0 0 0 chr2 136021580 136021626 -114666228 + (TG)n Simple_repeat Simple_repeat 2 47 0 2270 88 0 28 chr2 136021924 136022242 -114665612 + AluSc SINE Alu 1 309 0 6109 26 0 3 chr2 136022735 136023495 -114664359 + L1P LINE L1 4421 5178 -968 366 325 185 6 chr2 136023861 136024018 -114663836 + MIR SINE MIR 28 212 -50 553 271 80 0 chr2 136024380 136024568 -114663286 - MER58A DNA MER1_type -20 204 2 234 297 203 20 chr2 136027243 136027391 -114660463 - MLT1J LTR MaLR -313 198 24 1838 153 11 0 chr2 136027831 136028163 -114659691 - AluSx SINE Alu 0 335 1 316 215 0 0 chr2 136028482 136028547 -114659307 + MER116 DNA Mariner 16 80 0 398 319 51 28 chr2 136028790 136029006 -114658848 - MLT1H LTR MaLR -225 324 104 2455 179 64 61 chr2 136029180 136029801 -114658053 - MLT1E2 LTR MaLR -3 623 1 645 262 20 0 chr2 136031208 136031357 -114656497 - MIR SINE MIR 0 262 111 1010 167 5 11 chr2 136031683 136031869 -114655985 - MER6B DNA MER2_type -25 185 1 * 1031 211 79 84 chr2 136031869 136032285 -114655569 - MLT1C LTR MaLR -48 419 6 2392 83 0 0 chr2 136032464 136032766 -114655088 - AluY SINE Alu -9 302 1 280 258 142 33 chr2 136032814 136032934 -114654920 - L2 LINE L2 -4 3309 3177 182 304 25 38 chr2 136033027 136033106 -114654748 - L2 LINE L2 -196 3076 2999 2143 127 140 8 chr2 136033109 136033487 -114654367 - MSTA LTR MaLR 0 428 1 975 224 58 84 chr2 136033694 136034122 -114653732 - MLT1D LTR MaLR 0 505 89 638 216 8 15 chr2 136034152 136034286 -114653568 - FLAM_C SINE Alu 0 133 1 666 267 40 40 chr2 136034684 136034935 -114652919 + MER20B DNA MER1_type 249 499 -284 1097 166 71 12 chr2 136035534 136035787 -114652067 + MER20B DNA MER1_type 515 782 -1 424 265 61 34 chr2 136036388 136036535 -114651319 + L2 LINE L2 3158 3308 -5 1718 168 0 27 chr2 136037708 136038005 -114649849 - AluJo SINE Alu -12 300 12 333 289 97 9 chr2 136038089 136038203 -114649651 + L2 LINE L2 3169 3292 -21 293 331 88 7 chr2 136038207 136038343 -114649511 - MIR3 SINE MIR -12 196 50 573 205 84 84 chr2 136039230 136039445 -114648409 + MER58C DNA MER1_type 1 215 0 307 308 110 7 chr2 136039831 136039977 -114647877 - MIR SINE MIR -62 200 40 552 366 57 30 chr2 136040169 136040571 -114647283 + L2 LINE L2 2829 3241 -31 225 269 15 0 chr2 136040588 136040655 -114647199 + (TGAA)n Simple_repeat Simple_repeat 1 68 0 1818 136 14 0 chr2 136042198 136042484 -114645370 + L1PA15 LINE L1 5867 6156 -9 987 187 16 0 chr2 136043743 136043925 -114643929 - MER58A DNA MER1_type -1 223 39 254 267 13 0 chr2 136044178 136044253 -114643601 + L1ME4a LINE L1 5517 5592 -529 268 330 0 23 chr2 136044309 136044397 -114643457 - L2 LINE L2 0 3313 3228 514 304 105 26 chr2 136044458 136044764 -114643090 + L1ME4a LINE L1 5748 6077 -44 316 244 189 31 chr2 136046271 136046398 -114641456 - MIR3 SINE MIR -49 159 13 263 200 267 0 chr2 136046483 136046558 -114641296 + MIR SINE MIR 33 127 -81 294 255 113 98 chr2 136047448 136047848 -114640006 + MLT1J LTR MaLR 101 506 -5 356 193 20 14 chr2 136047976 136048057 -114639797 + MER2 DNA MER2_type 1 89 -150 23 0 0 0 chr2 136048187 136048210 -114639644 + AT_rich Low_complexity Low_complexity 1 23 0 2412 255 69 53 chr2 136048326 136049708 -114638146 - L1MDb LINE L1 -3819 2587 1229 1859 164 3 10 chr2 136049708 136050000 -114637854 + AluJb SINE Alu 1 290 -22 2412 255 69 53 chr2 136050000 136050182 -114637672 - L1MDb LINE L1 -5177 1229 1051 1941 198 51 25 chr2 136050182 136050631 -114637223 - MER65C LTR ERV1 0 461 1 2412 255 69 53 chr2 136050631 136050857 -114636997 - L1MDb LINE L1 -5355 1051 789 306 298 134 18 chr2 136051289 136051460 -114636394 - L1MDb LINE L1 -5873 523 333 25 0 0 0 chr2 136051516 136051541 -114636313 + AT_rich Low_complexity Low_complexity 1 25 0 282 284 105 0 chr2 136051636 136051731 -114636123 + L2 LINE L2 3193 3297 -16 1667 117 0 4 chr2 136052055 136052286 -114635568 + AluSq SINE Alu 74 303 -10 299 265 24 0 chr2 136052547 136052630 -114635224 - MIR SINE MIR -177 85 1 1869 28 0 0 chr2 136052988 136053202 -114634652 - AluYa5 SINE Alu 0 311 98 202 247 39 13 chr2 136053584 136053661 -114634193 + (TATG)n Simple_repeat Simple_repeat 2 80 0 216 67 0 0 chr2 136053694 136053724 -114634130 + (CA)n Simple_repeat Simple_repeat 2 31 0 37 52 0 0 chr2 136054579 136054637 -114633217 + AT_rich Low_complexity Low_complexity 1 58 0 396 287 287 42 chr2 136056385 136056695 -114631159 + LTR16A LTR ERVL 65 450 0 1080 76 0 0 chr2 136057298 136057429 -114630425 + AluY SINE Alu 1 131 -180 204 298 0 0 chr2 136057900 136057947 -114629907 + polypurine Low_complexity Low_complexity 2 48 0 217 311 0 0 chr2 136058384 136058445 -114629409 + (CATA)n Simple_repeat Simple_repeat 2 62 0 2215 106 0 0 chr2 136058834 136059118 -114628736 - AluSc SINE Alu -25 284 1 373 247 47 95 chr2 136062846 136062947 -114624907 + MIR SINE MIR 47 136 -126 623 111 0 0 chr2 136062947 136063037 -114624817 - L1PA14 LINE L1 -17 6144 6055 373 247 47 95 chr2 136063037 136063125 -114624729 + MIR SINE MIR 136 227 -35 858 86 47 0 chr2 136063147 136063275 -114624579 - Tigger1 DNA MER2_type -396 2022 1889 318 269 11 21 chr2 136064424 136064517 -114623337 + 7SK RNA RNA 7 98 -95 11655 138 20 36 chr2 136064574 136064759 -114623095 - Tigger1 DNA MER2_type 0 2418 2232 1738 180 20 10 chr2 136064759 136065059 -114622795 - AluJb SINE Alu 0 312 10 11655 138 20 36 chr2 136065059 136065155 -114622699 - Tigger1 DNA MER2_type -186 2232 2136 2326 65 0 7 chr2 136065155 136065446 -114622408 - AluY SINE Alu -22 289 1 11655 138 20 36 chr2 136065446 136067613 -114620241 - Tigger1 DNA MER2_type -282 2136 5 25 65 0 0 chr2 136068021 136068067 -114619787 + AT_rich Low_complexity Low_complexity 1 46 0 241 78 0 39 chr2 136068938 136068989 -114618865 + (TA)n Simple_repeat Simple_repeat 1 49 0 2222 119 0 0 chr2 136071783 136072085 -114615769 - AluSq SINE Alu -11 302 1 278 296 34 0 chr2 136072475 136072563 -114615291 + L2 LINE L2 3173 3263 -9 311 320 31 0 chr2 136072572 136072669 -114615185 + MIR3 SINE MIR 83 182 -26 2332 92 3 3 chr2 136074950 136075255 -114612599 - AluY SINE Alu -4 307 3 202 359 102 6 chr2 136076180 136076347 -114611507 - MIR SINE MIR -72 190 8 1854 177 3 0 chr2 136077842 136078153 -114609701 + AluJo SINE Alu 1 312 0 3005 178 78 11 chr2 136078323 136078976 -114608878 + MER44D DNA MER2_type 9 705 0 204 111 0 0 chr2 136079121 136079157 -114608697 + (TA)n Simple_repeat Simple_repeat 1 36 0 1379 196 71 17 chr2 136079396 136079733 -114608121 - AluJo SINE Alu 0 353 1 619 288 52 39 chr2 136079737 136080362 -114607492 - L1ME LINE L1 -470 5700 5055 238 324 7 28 chr2 136080380 136080522 -114607332 - L1ME LINE L1 -1200 4946 4808 195 268 0 110 chr2 136080672 136080754 -114607100 - L2 LINE L2 -35 3278 3206 1520 113 41 0 chr2 136080880 136081101 -114606753 - MER30 DNA MER1_type 0 230 1 513 138 0 0 chr2 136084169 136084249 -114603605 + MADE1 DNA Mariner 1 80 0 187 271 140 75 chr2 136084696 136084803 -114603051 + MER5A DNA MER1_type 2 115 -74 253 127 73 0 chr2 136085641 136085696 -114602158 + MLT1C LTR MaLR 27 85 -420 5636 98 9 14 chr2 136085740 136086593 -114601261 - L1MA1 LINE L1 0 6302 5454 19734 192 38 9 chr2 136086597 136091412 -114596442 - L1 LINE L1 -875 6690 1626 1941 134 134 28 chr2 136091412 136091799 -114596055 + MSTA LTR MaLR 1 428 0 19734 192 38 9 chr2 136091799 136093453 -114594401 - L1 LINE L1 -5939 1626 21 825 207 95 13 chr2 136093529 136093761 -114594093 + MLT1C LTR MaLR 201 451 -16 339 266 156 19 chr2 136095053 136095207 -114592647 + MIR SINE MIR 47 221 -41 2555 125 25 54 chr2 136095351 136095792 -114592062 - MSTA LTR MaLR 0 428 1 1153 171 0 0 chr2 136096314 136096507 -114591347 - MER46A DNA MER2_type 0 236 44 23 54 0 0 chr2 136096694 136096731 -114591123 + AT_rich Low_complexity Low_complexity 1 37 0 355 204 57 11 chr2 136096796 136096884 -114590970 - L3 LINE CR1 -2 1575 1484 860 261 30 17 chr2 136096904 136097138 -114590716 + MIR SINE MIR 13 249 -13 1421 105 26 4 chr2 136098161 136098484 -114589370 + L1PA10 LINE L1 5166 5500 -668 1158 110 33 6 chr2 136098484 136098651 -114589203 + L1PA10 LINE L1 5966 6152 -16 2862 133 11 0 chr2 136100526 136100969 -114586885 + L1PA16 LINE L1 5705 6152 -14 753 211 116 67 chr2 136101203 136101530 -114586324 - MLT1E LTR MaLR 0 593 312 356 184 73 109 chr2 136101549 136101803 -114586051 - LTR49 LTR ERV1 0 595 391 280 311 17 14 chr2 136101841 136102054 -114585800 - MER34 LTR ERV1 -416 126 11 942 199 137 0 chr2 136102055 136102296 -114585558 - MER34C LTR ERV1 -311 274 1 1893 158 7 3 chr2 136102496 136102806 -114585048 + AluSx SINE Alu 1 311 -1 181 415 0 0 chr2 136104270 136104335 -114583519 + L2 LINE L2 3247 3311 -2 274 248 119 0 chr2 136104393 136104502 -114583352 - MIR SINE MIR -120 142 21 284 343 116 11 chr2 136105190 136105371 -114582483 - MIR SINE MIR -16 246 47 402 289 66 74 chr2 136105747 136106003 -114581851 - MIR SINE MIR 0 262 9 183 256 12 93 chr2 136108470 136108556 -114579298 - L3 LINE CR1 -108 1469 1391 183 162 0 0 chr2 136108940 136108977 -114578877 - L2 LINE L2 -219 3053 3017 441 365 73 9 chr2 136109085 136109318 -114578536 + MIR SINE MIR 15 262 0 393 205 0 0 chr2 136109455 136109533 -114578321 - MER116 DNA Mariner 0 80 3 2126 148 39 25 chr2 136110753 136111112 -114576742 + THE1B LTR MaLR 1 364 0 1727 105 26 0 chr2 136111896 136112162 -114575692 + AluY SINE Alu 18 290 -21 2415 80 0 6 chr2 136114484 136114796 -114573058 - AluY SINE Alu -1 310 1 400 319 14 14 chr2 136115409 136115547 -114572307 - MER5A DNA MER1_type -48 141 4 216 0 0 0 chr2 136115776 136115800 -114572054 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 363 202 25 25 chr2 136116574 136116693 -114571161 + MLT1J1 LTR MaLR 25 143 -303 430 200 36 18 chr2 136116823 136116933 -114570921 + MER94 DNA DNA 12 123 -11 300 136 85 17 chr2 136117022 136117081 -114570773 + MLT1I LTR MaLR 347 409 0 266 288 85 42 chr2 136117330 136117448 -114570406 - MIR SINE MIR -70 192 70 228 35 0 0 chr2 136117948 136117977 -114569877 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1983 155 0 7 chr2 136118280 136118609 -114569245 - AluJb SINE Alu 0 327 1 27 51 0 17 chr2 136119156 136119184 -114568670 + AT_rich Low_complexity Low_complexity 1 28 -30 5118 166 29 33 chr2 136119184 136120259 -114567595 + MER11C LTR ERVK 1 1071 0 27 51 0 17 chr2 136120259 136120289 -114567565 + AT_rich Low_complexity Low_complexity 28 58 0 1765 162 18 21 chr2 136122047 136122387 -114565467 + MER44D DNA MER2_type 1 609 0 1076 244 51 30 chr2 136122460 136122792 -114565062 + MER2 DNA MER2_type 1 339 -6 286 344 62 8 chr2 136122925 136123053 -114564801 + MIR SINE MIR 5 139 -123 1631 147 40 15 chr2 136123096 136123368 -114564486 + AluJb SINE Alu 23 301 -11 1291 235 22 14 chr2 136123448 136123810 -114564044 - L1ME2 LINE L1 -14 6150 5786 32 0 0 0 chr2 136123849 136123881 -114563973 + AT_rich Low_complexity Low_complexity 1 32 0 259 313 25 0 chr2 136126530 136126610 -114561244 + MIR SINE MIR 21 102 -106 295 350 10 14 chr2 136126931 136127076 -114560778 + MIR3 SINE MIR 11 153 -66 180 250 25 0 chr2 136128186 136128226 -114559628 - L2 LINE L2 -533 2781 2741 332 252 126 8 chr2 136128284 136128411 -114559443 + L1ME LINE L1 5669 5810 -311 468 243 9 0 chr2 136128412 136128519 -114559335 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 3652 134 36 43 chr2 136128509 136128599 -114559255 + Tigger3(Golem) DNA MER2_type 2276 2365 -663 2183 114 3 0 chr2 136128599 136128889 -114558965 - AluSq SINE Alu -20 293 3 320 0 25 0 chr2 136128896 136128936 -114558918 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 2052 126 14 0 chr2 136128938 136129215 -114558639 - AluSx SINE Alu -31 281 1 3652 134 36 43 chr2 136129215 136129872 -114557982 + Tigger3(Golem) DNA MER2_type 2372 3028 0 218 382 103 22 chr2 136131591 136131863 -114555991 + L3b LINE CR1 1185 1478 -105 266 185 37 74 chr2 136132414 136132495 -114555359 + MIR3 SINE MIR 99 176 -32 228 308 0 0 chr2 136132498 136132563 -114555291 - L2 LINE L2 -7 3265 3201 555 310 23 6 chr2 136133332 136133506 -114554348 - MIR SINE MIR -67 195 19 202 225 0 0 chr2 136133620 136133660 -114554194 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 1575 207 148 14 chr2 136133693 136134132 -114553722 - MLT1D LTR MaLR 0 505 8 223 366 42 21 chr2 136135565 136135707 -114552147 + MIR3 SINE MIR 7 151 -57 276 353 32 5 chr2 136135909 136136099 -114551755 - Charlie8 DNA MER1_type -2138 279 85 1934 116 7 4 chr2 136136099 136136376 -114551478 - AluSc SINE Alu -7 302 25 738 257 6 16 chr2 136136549 136136732 -114551122 - MIR SINE MIR 0 262 82 2620 147 27 11 chr2 136137331 136137781 -114550073 - LTR32 LTR ERVL 0 471 15 236 309 41 52 chr2 136138067 136138251 -114549603 - MER5B DNA MER1_type -7 171 1 240 272 22 33 chr2 136140291 136140383 -114547471 + MER5B DNA MER1_type 63 153 -25 617 171 9 9 chr2 136140491 136140602 -114547252 - FLAM_C SINE Alu -26 117 7 2718 193 29 10 chr2 136141017 136141634 -114546220 + L1 LINE L1 3892 4520 -1626 2545 143 12 7 chr2 136141635 136142067 -114545787 + L1PA16 LINE L1 5724 6157 -9 202 333 72 18 chr2 136142192 136142303 -114545551 + MIR SINE MIR 36 152 -110 226 274 147 20 chr2 136143963 136144065 -114543789 - MIR SINE MIR -64 144 30 647 209 37 86 chr2 136144102 136144289 -114543565 - MER5B DNA MER1_type 0 178 1 2073 132 13 7 chr2 136144291 136144601 -114543253 + AluJb SINE Alu 1 312 0 267 345 0 25 chr2 136144931 136145050 -114542804 + MIR SINE MIR 3 118 -144 384 215 167 21 chr2 136145327 136145471 -114542383 + MER113 DNA MER1_type? 217 381 -140 338 326 58 12 chr2 136146042 136146214 -114541640 - MIR3 SINE MIR -9 199 20 831 113 33 0 chr2 136147794 136147944 -114539910 - L1MA8 LINE L1 -5 6286 6132 342 263 113 16 chr2 136148092 136148286 -114539568 - AluSg SINE Alu -122 178 4 700 196 36 21 chr2 136148302 136148496 -114539358 - L1MA8 LINE L1 -259 6032 5836 270 303 155 28 chr2 136149959 136150124 -114537730 + MIR SINE MIR 17 196 -12 206 121 0 0 chr2 136150808 136150841 -114537013 + (T)n Simple_repeat Simple_repeat 1 33 0 413 342 19 6 chr2 136151021 136151179 -114536675 - MIR3 SINE MIR -7 201 42 2211 121 0 10 chr2 136151690 136151988 -114535866 - AluSc SINE Alu -14 295 1 1044 88 0 22 chr2 136151988 136152124 -114535730 - AluSc SINE Alu -176 133 1 404 239 15 122 chr2 136152626 136152823 -114535031 - MER5A DNA MER1_type -13 176 1 225 249 132 117 chr2 136152941 136153214 -114534640 + L2 LINE L2 2593 2869 -445 434 315 16 0 chr2 136153425 136153552 -114534302 + L2 LINE L2 3177 3305 -8 371 239 79 43 chr2 136154874 136155150 -114532704 + LTR16C LTR ERVL 65 454 -37 2073 108 3 7 chr2 136155233 136155520 -114532334 + AluSx SINE Alu 5 290 -22 224 338 124 34 chr2 136155573 136156017 -114531837 + L2 LINE L2 1544 2027 -1287 * 350 302 128 29 chr2 136156008 136156180 -114531674 - MIR3 SINE MIR -11 197 9 807 288 76 37 chr2 136156257 136156924 -114530930 + L2 LINE L2 2624 3313 0 498 33 0 0 chr2 136157345 136157405 -114530449 + (TG)n Simple_repeat Simple_repeat 2 61 0 2952 211 12 20 chr2 136157421 136158071 -114529783 - MER82 DNA MER2_type -7 646 2 2186 116 0 0 chr2 136158168 136158460 -114529394 + AluSx SINE Alu 1 292 -20 351 0 0 0 chr2 136158624 136158663 -114529191 + (CA)n Simple_repeat Simple_repeat 2 40 0 1562 107 62 0 chr2 136158685 136158929 -114528925 + MER7A DNA MER2_type 45 301 -45 278 172 31 0 chr2 136158940 136159004 -114528850 + (TATATG)n Simple_repeat Simple_repeat 3 68 0 181 169 34 34 chr2 136159505 136159564 -114528290 + (CATATA)n Simple_repeat Simple_repeat 5 63 0 189 0 0 0 chr2 136161179 136161200 -114526654 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 2111 68 4 4 chr2 136161677 136161943 -114525911 + AluY SINE Alu 1 266 -45 258 56 0 0 chr2 136161945 136161981 -114525873 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 642 271 57 35 chr2 136162088 136162317 -114525537 + MIR SINE MIR 1 234 -28 23 54 0 0 chr2 136163019 136163056 -114524798 + AT_rich Low_complexity Low_complexity 1 37 0 206 241 0 0 chr2 136163205 136163259 -114524595 + (TA)n Simple_repeat Simple_repeat 2 55 0 26 0 0 0 chr2 136163308 136163334 -114524520 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr2 136164392 136164416 -114523438 + AT_rich Low_complexity Low_complexity 1 24 0 257 147 73 9 chr2 136165443 136165552 -114522302 + (TA)n Simple_repeat Simple_repeat 2 117 0 602 304 94 58 chr2 136165626 136166244 -114521610 - L2 LINE L2 -104 3209 2573 3264 136 62 12 chr2 136166432 136167048 -114520806 - MER39B LTR ERV1 0 630 1 528 250 40 0 chr2 136167048 136167172 -114520682 - MIR SINE MIR -100 162 34 1707 276 138 33 chr2 136167183 136168088 -114519766 - L2 LINE L2 -752 2562 1563 344 297 43 65 chr2 136168100 136168238 -114519616 + MER5B DNA MER1_type 42 176 -2 777 167 43 11 chr2 136168338 136168524 -114519330 - L1MA7 LINE L1 -10 6281 6090 325 152 33 14 chr2 136168524 136168607 -114519247 - L1MA7 LINE L1 -257 6043 5951 3695 63 6 0 chr2 136168614 136169109 -114518745 + L1PA8 LINE L1 5362 5859 -313 365 266 217 25 chr2 136169724 136169927 -114517927 - L1ME4a LINE L1 -4 6117 5876 608 270 103 5 chr2 136170399 136170603 -114517251 - MLT1K LTR MaLR -13 575 352 199 146 36 0 chr2 136170880 136170935 -114516919 + CT-rich Low_complexity Low_complexity 2 58 0 30 59 0 0 chr2 136171058 136171109 -114516745 + AT_rich Low_complexity Low_complexity 1 51 0 236 75 0 25 chr2 136173639 136173679 -114514175 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2222 135 0 0 chr2 136174441 136174753 -114513101 - AluSx SINE Alu 0 312 1 1091 207 30 28 chr2 136174857 136175336 -114512518 - MER74A LTR ERVL 0 558 22 417 20 0 0 chr2 136175511 136175561 -114512293 + (TTTTC)n Simple_repeat Simple_repeat 5 54 0 1929 157 0 3 chr2 136177650 136177944 -114509910 - AluJb SINE Alu -19 293 1 221 278 191 24 chr2 136178668 136178794 -114509060 + MIR SINE MIR 8 154 -108 267 188 21 0 chr2 136179898 136179946 -114507908 - L3 LINE CR1 -118 1459 1411 639 258 42 19 chr2 136179977 136180190 -114507664 + MIR SINE MIR 40 257 -5 639 353 76 42 chr2 136180214 136180911 -114506943 - L3 LINE CR1 -173 1404 684 214 322 67 0 chr2 136180980 136181070 -114506784 + MIR3 SINE MIR 90 185 -23 921 188 5 51 chr2 136182100 136182297 -114505557 + MER5A DNA MER1_type 1 188 -1 895 294 123 19 chr2 136182781 136183253 -114504601 - MLT1K LTR MaLR -2 586 66 199 309 64 18 chr2 136183399 136183509 -114504345 + MIR SINE MIR 21 135 -73 32 75 0 0 chr2 136183570 136183637 -114504217 + AT_rich Low_complexity Low_complexity 1 67 0 274 188 125 52 chr2 136183926 136184022 -114503832 - L1ME4a LINE L1 -303 5818 5716 2218 81 3 78 chr2 136184334 136184559 -114503295 + L1PB2 LINE L1 5820 6010 -141 2038 141 11 0 chr2 136184559 136184842 -114503012 - AluSx SINE Alu -26 286 1 2218 81 3 78 chr2 136184842 136184975 -114502879 + L1PB2 LINE L1 6010 6151 0 25 65 0 0 chr2 136184980 136185026 -114502828 + AT_rich Low_complexity Low_complexity 1 46 0 237 288 12 12 chr2 136185758 136185838 -114502016 + CT-rich Low_complexity Low_complexity 1 80 0 204 275 55 37 chr2 136185998 136186107 -114501747 - MIR SINE MIR -68 140 30 267 307 77 29 chr2 136187261 136187594 -114500260 + LTR16C LTR ERVL 4 405 -86 2284 120 0 0 chr2 136188280 136188588 -114499266 + AluSx SINE Alu 3 310 -2 1937 139 4 0 chr2 136189976 136190257 -114497597 - AluSx SINE Alu -18 294 13 424 340 63 25 chr2 136191138 136191297 -114496557 - L2 LINE L2 -18 3254 3090 2324 58 0 4 chr2 136191360 136191638 -114496216 + AluY SINE Alu 26 302 -9 195 100 0 0 chr2 136192226 136192256 -114495598 + (GAAAA)n Simple_repeat Simple_repeat 3 32 0 180 283 359 0 chr2 136192948 136193040 -114494814 - MIR3 SINE MIR -2 206 82 955 159 70 0 chr2 136193040 136193241 -114494613 - MER57B LTR ERV1 0 434 220 615 118 0 0 chr2 136193275 136193368 -114494486 - MER57B LTR ERV1 -341 93 1 546 194 169 25 chr2 136193523 136193683 -114494171 + MIR SINE MIR 11 193 -69 2518 189 35 0 chr2 136193790 136194283 -114493571 - MLT2B2 LTR ERVL -5 510 1 613 191 145 0 chr2 136194404 136194556 -114493298 - MLT2F LTR ERVL 0 663 490 571 243 21 7 chr2 136194613 136194757 -114493097 - MLT2F LTR ERVL -517 146 1 23 33 0 0 chr2 136195007 136195037 -114492817 + AT_rich Low_complexity Low_complexity 1 30 0 740 211 39 29 chr2 136195276 136195480 -114492374 - MLT1A2 LTR MaLR 0 374 169 736 201 87 7 chr2 136195520 136195555 -114492299 - AluJo SINE Alu -144 168 137 405 0 0 0 chr2 136195555 136195600 -114492254 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 736 201 87 7 chr2 136195600 136195713 -114492141 - AluJo SINE Alu -175 137 8 873 267 76 4 chr2 136196248 136196473 -114491381 - MIR SINE MIR -21 241 1 4954 166 29 18 chr2 136196733 136198598 -114489256 + L1PB4 LINE L1 4197 6082 -74 3748 135 37 22 chr2 136199108 136199781 -114488073 + L1PB4 LINE L1 5465 6147 -9 231 257 54 40 chr2 136199814 136199888 -114487966 + MIR SINE MIR 33 107 -101 2204 107 0 77 chr2 136199937 136200092 -114487762 + MER1B DNA MER1_type 1 166 -2544 2393 83 0 26 chr2 136200092 136200405 -114487449 - AluY SINE Alu -6 305 1 2204 107 0 77 chr2 136200405 136200614 -114487240 + MER1B DNA MER1_type 166 337 0 29 0 0 0 chr2 136201866 136201895 -114485959 + AT_rich Low_complexity Low_complexity 1 29 0 332 289 35 9 chr2 136202566 136202680 -114485174 + L2 LINE L2 3155 3271 -1 432 277 114 18 chr2 136202857 136203023 -114484831 + MIR SINE MIR 20 201 -61 514 371 8 22 chr2 136203024 136203291 -114484563 - L2 LINE L2 -367 2947 2685 218 367 101 22 chr2 136203325 136203464 -114484390 + L2 LINE L2 2827 2976 -338 701 274 129 72 chr2 136203545 136204002 -114483852 - MLT1K LTR MaLR -99 489 7 235 283 9 62 chr2 136204010 136204123 -114483731 + L2 LINE L2 2985 3091 -181 184 171 0 29 chr2 136204189 136204224 -114483630 + L2 LINE L2 3268 3301 -12 281 329 0 36 chr2 136204913 136205050 -114482804 + GA-rich Low_complexity Low_complexity 5 136 0 379 275 0 0 chr2 136205307 136205398 -114482456 - L1MC4 LINE L1 -1338 6704 6614 361 289 0 0 chr2 136205328 136205418 -114482436 + L1MC4 LINE L1 6614 6703 -1339 * 180 0 0 0 chr2 136205431 136205451 -114482403 + (TA)n Simple_repeat Simple_repeat 1 20 0 256 247 71 71 chr2 136205816 136205901 -114481953 - MIR SINE MIR -147 115 31 277 230 0 50 chr2 136206375 136206475 -114481379 + CT-rich Low_complexity Low_complexity 2 96 0 619 251 34 45 chr2 136208943 136209122 -114478732 + MIR SINE MIR 85 261 -1 319 244 0 0 chr2 136210133 136210219 -114477635 - L1ME LINE L1 -325 5796 5711 609 276 113 9 chr2 136212563 136212784 -114475070 - MIR SINE MIR -4 258 15 3835 82 15 27 chr2 136215398 136215993 -114471861 + L1MA2 LINE L1 5717 6304 0 21 0 0 0 chr2 136215996 136216017 -114471837 + AT_rich Low_complexity Low_complexity 1 21 0 898 233 98 34 chr2 136216182 136216539 -114471315 + L1MC4 LINE L1 7631 8016 -26 2807 136 30 43 chr2 136216539 136216663 -114471191 - L1MA4A LINE L1 -2 6301 6177 2046 148 7 0 chr2 136216663 136216967 -114470887 - AluSx SINE Alu -6 306 1 2807 136 30 43 chr2 136216967 136217400 -114470454 - L1MA4A LINE L1 -126 6177 5751 898 233 98 34 chr2 136217400 136217428 -114470426 + L1MC4 LINE L1 8016 8041 -1 369 253 91 40 chr2 136218728 136218926 -114468928 + MIR SINE MIR 34 241 -21 1151 339 116 56 chr2 136219240 136219458 -114468396 + L3 LINE CR1 108 312 -1265 2099 127 3 0 chr2 136219458 136219749 -114468105 - AluSx SINE Alu -20 292 1 1151 339 116 56 chr2 136219749 136220785 -114467069 + L3 LINE CR1 312 1437 -140 2421 73 0 0 chr2 136220857 136221157 -114466697 + AluY SINE Alu 1 300 -11 706 215 24 23 chr2 136222046 136222390 -114465464 + LTR52 LTR ERVL 1 417 -4 684 329 106 42 chr2 136222905 136224359 -114463495 + L1MC/D LINE L1 4158 5707 -743 2315 91 7 0 chr2 136224446 136224807 -114463047 - AluY SINE Alu 0 363 1 247 196 49 98 chr2 136225158 136225260 -114462594 + MIR SINE MIR 120 216 -46 741 163 25 103 chr2 136225433 136225636 -114462218 + MER3 DNA MER1_type 2 188 -21 538 380 26 0 chr2 136225665 136225894 -114461960 - MIR SINE MIR -26 236 2 1680 100 4 25 chr2 136227818 136228057 -114459797 - AluSg/x SINE Alu 0 312 79 213 222 63 16 chr2 136228163 136228226 -114459628 + MIR3 SINE MIR 122 187 -21 210 128 0 0 chr2 136228327 136228366 -114459488 + (TG)n Simple_repeat Simple_repeat 2 40 0 346 233 14 0 chr2 136228370 136228443 -114459411 + MER20 DNA MER1_type 30 103 -116 13563 139 11 27 chr2 136228452 136228896 -114458958 + Tigger1 DNA MER2_type 24 473 -1945 1909 154 3 7 chr2 136228896 136229221 -114458633 - AluSx SINE Alu 0 312 1 13563 139 11 27 chr2 136229221 136231209 -114456645 + Tigger1 DNA MER2_type 473 2418 0 740 149 0 0 chr2 136231213 136231327 -114456527 + MER20 DNA MER1_type 106 219 0 269 350 123 6 chr2 136231812 136231975 -114455879 - MIR3 SINE MIR -26 182 1 2273 118 0 0 chr2 136232648 136232961 -114454893 - AluSq SINE Alu 0 313 1 201 39 0 0 chr2 136232968 136232994 -114454860 + (T)n Simple_repeat Simple_repeat 1 26 0 510 307 34 10 chr2 136232994 136233199 -114454655 + MIR SINE MIR 53 262 0 220 286 163 0 chr2 136233261 136233359 -114454495 + L2 LINE L2 2246 2359 -955 2381 50 3 53 chr2 136233445 136233764 -114454090 - AluY SINE Alu -8 303 1 180 152 0 0 chr2 136234900 136234933 -114452921 + (TG)n Simple_repeat Simple_repeat 1 33 0 23 0 0 0 chr2 136234976 136234999 -114452855 + AT_rich Low_complexity Low_complexity 1 23 0 309 239 70 78 chr2 136235016 136235158 -114452696 - L1ME3A LINE L1 -99 6071 5931 647 319 58 45 chr2 136235190 136235726 -114452128 - L1ME3A LINE L1 -207 5963 5421 207 209 0 0 chr2 136235783 136235826 -114452028 + T-rich Low_complexity Low_complexity 1 43 0 255 195 85 61 chr2 136236057 136236139 -114451715 + MIR SINE MIR 115 198 -64 554 239 61 11 chr2 136237446 136237626 -114450228 + MER5A DNA MER1_type 1 189 0 23 0 0 0 chr2 136238955 136238978 -114448876 + AT_rich Low_complexity Low_complexity 1 23 0 969 230 193 45 chr2 136239473 136239956 -114447898 - MLT1H1 LTR MaLR 0 555 2 1994 145 10 7 chr2 136240123 136240426 -114447428 + AluSx SINE Alu 1 304 -8 1494 169 0 13 chr2 136240900 136241136 -114446718 + AluJo SINE Alu 37 269 -43 498 118 0 0 chr2 136241335 136241411 -114446443 - MADE1 DNA Mariner 0 80 5 537 110 0 0 chr2 136241411 136241493 -114446361 + (TGGA)n Simple_repeat Simple_repeat 4 85 0 2876 200 57 47 chr2 136241524 136241795 -114446059 + L1MC4 LINE L1 7133 7400 -642 1150 149 57 22 chr2 136241795 136242023 -114445831 - MER46A DNA MER2_type 0 236 1 2876 200 57 47 chr2 136242023 136242641 -114445213 + L1MC4 LINE L1 7400 8031 -11 190 366 41 16 chr2 136244203 136244326 -114443528 - MIR3 SINE MIR 0 208 83 288 0 0 0 chr2 136245575 136245607 -114442247 + (TG)n Simple_repeat Simple_repeat 2 33 0 1718 139 3 57 chr2 136245608 136245909 -114441945 - AluJo SINE Alu -27 285 1 1855 266 97 15 chr2 136245966 136246770 -114441084 + L1MC4a LINE L1 6049 6918 -890 1667 219 62 2 chr2 136246801 136247234 -114440620 + L1MC4 LINE L1 7098 7556 -486 330 313 0 0 chr2 136247234 136247330 -114440524 + A-rich Low_complexity Low_complexity 1 96 0 2285 110 0 0 chr2 136247338 136247629 -114440225 + AluSq SINE Alu 1 291 -22 572 62 12 0 chr2 136248022 136248103 -114439751 + (TG)n Simple_repeat Simple_repeat 2 83 0 916 188 21 5 chr2 136249101 136249287 -114438567 + MER5A DNA MER1_type 1 189 0 1621 192 0 42 chr2 136250322 136250630 -114437224 + AluJo SINE Alu 4 298 -14 208 357 0 9 chr2 136250751 136250863 -114436991 + (CA)n Simple_repeat Simple_repeat 2 112 0 585 262 12 12 chr2 136251438 136251610 -114436244 - MER5B DNA MER1_type -1 177 6 279 0 0 0 chr2 136251790 136251821 -114436033 + (TAAAA)n Simple_repeat Simple_repeat 4 34 0 337 328 61 11 chr2 136251829 136252009 -114435845 + MER5A DNA MER1_type 1 189 0 2332 102 0 3 chr2 136252309 136252613 -114435241 + AluSg SINE Alu 1 303 -7 271 318 71 0 chr2 136252705 136252831 -114435023 + L2 LINE L2 3179 3313 0 189 147 0 0 chr2 136253220 136253254 -114434600 + (CA)n Simple_repeat Simple_repeat 2 35 0 2238 75 0 34 chr2 136253304 136253620 -114434234 + AluY SINE Alu 1 306 0 185 292 92 69 chr2 136253682 136253812 -114434042 - MIR SINE MIR -11 251 119 231 36 0 0 chr2 136255374 136255402 -114432452 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 631 216 85 7 chr2 136256597 136256750 -114431104 - MLT1L LTR MaLR -386 229 65 743 213 165 48 chr2 136256855 136257188 -114430666 - MLT1J LTR MaLR -128 383 12 351 284 43 35 chr2 136258155 136258296 -114429558 + MIR SINE MIR 91 232 -30 21 36 0 0 chr2 136258627 136258655 -114429199 + AT_rich Low_complexity Low_complexity 1 28 0 1049 239 83 71 chr2 136258846 136259327 -114428527 - MLT1J LTR MaLR -6 505 19 191 36 36 0 chr2 136260461 136260489 -114427365 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 192 293 17 0 chr2 136260828 136260886 -114426968 - MIR SINE MIR -51 211 153 280 288 128 16 chr2 136261782 136261907 -114425947 - MIR3 SINE MIR -62 146 8 240 143 0 0 chr2 136263225 136263267 -114424587 + (T)n Simple_repeat Simple_repeat 1 42 0 841 87 0 0 chr2 136263597 136263700 -114424154 + AluSg SINE Alu 2 104 -206 248 263 35 0 chr2 136263984 136264041 -114423813 - L2 LINE L2 -19 3294 3236 210 226 48 0 chr2 136264298 136264360 -114423494 + GA-rich Low_complexity Low_complexity 5 69 0 803 212 15 10 chr2 136266340 136266538 -114421316 - MER3 DNA MER1_type -5 204 6 23 0 0 0 chr2 136267258 136267281 -114420573 + AT_rich Low_complexity Low_complexity 1 23 0 570 301 86 0 chr2 136268851 136269037 -114418817 - MIR SINE MIR -21 241 40 1806 94 0 0 chr2 136269832 136270055 -114417799 - AluY SINE Alu -88 223 1 353 318 45 30 chr2 136272586 136272784 -114415070 - Charlie8 DNA MER1_type -2200 217 17 508 351 37 60 chr2 136272904 136273203 -114414651 - L2 LINE L2 0 3272 2981 306 292 124 49 chr2 136275834 136276019 -114411835 - MIR3 SINE MIR 0 208 10 184 259 86 37 chr2 136276214 136276295 -114411559 + MIR SINE MIR 40 124 -138 947 186 6 0 chr2 136277104 136277260 -114410594 - FAM SINE Alu -18 157 1 629 231 60 28 chr2 136278003 136278219 -114409635 - L1ME1 LINE L1 -128 6038 5816 568 305 25 72 chr2 136278453 136278689 -114409165 + MIR SINE MIR 21 245 -17 21 57 0 0 chr2 136278958 136278993 -114408861 + AT_rich Low_complexity Low_complexity 1 35 0 308 238 85 82 chr2 136279103 136279222 -114408632 + MIR SINE MIR 29 153 -55 1828 148 50 0 chr2 136279333 136279610 -114408244 + AluSx SINE Alu 1 291 -21 551 289 53 50 chr2 136279821 136280539 -114407315 + L1MC/D LINE L1 4309 5050 -1096 241 204 78 42 chr2 136280810 136280952 -114406902 + L1MC/D LINE L1 5337 5483 -2325 269 275 141 30 chr2 136281048 136281380 -114406474 + L1MC/D LINE L1 5526 5898 -223 566 349 42 31 chr2 136282374 136282922 -114404932 + L1MC/D LINE L1 2277 2830 -3316 227 303 15 8 chr2 136282934 136283066 -114404788 + L1MC/D LINE L1 2857 2989 -3157 1583 159 64 27 chr2 136283103 136283398 -114404456 + AluJb SINE Alu 5 310 -2 270 329 74 32 chr2 136283924 136284682 -114403172 + L1MC/D LINE L1 3641 4430 -1716 350 301 68 18 chr2 136284760 136284923 -114402931 + L1MC/D LINE L1 4697 4867 -1279 2304 145 59 36 chr2 136284979 136285361 -114402493 + Tigger2 DNA MER2_type 9 487 -2231 2161 133 0 3 chr2 136285361 136285661 -114402193 + AluSx SINE Alu 1 299 -13 2304 145 59 36 chr2 136285661 136285915 -114401939 + Tigger2 DNA MER2_type 487 734 -1984 1003 123 123 34 chr2 136285989 136286157 -114401697 + Tigger2 DNA MER2_type 2461 2657 -61 1897 174 10 0 chr2 136286157 136286455 -114401399 - AluJb SINE Alu -7 305 5 1003 123 123 34 chr2 136286455 136286521 -114401333 + Tigger2 DNA MER2_type 2657 2716 -2 410 347 63 10 chr2 136286829 136287212 -114400642 + L1MC/D LINE L1 5256 5658 -2150 333 291 28 122 chr2 136287212 136287278 -114400576 + HAL1 LINE L1 95 166 -2341 2265 100 0 3 chr2 136287278 136287588 -114400266 - AluY SINE Alu -2 309 1 333 291 28 122 chr2 136287588 136287775 -114400079 + HAL1 LINE L1 166 324 -2183 895 274 145 60 chr2 136287839 136289170 -114398684 + HAL1 LINE L1 447 1961 -546 1169 149 42 9 chr2 136289170 136289385 -114398469 + L1PB1 LINE L1 5927 6148 -3 895 274 145 60 chr2 136289385 136289790 -114398064 + HAL1 LINE L1 1961 2330 -177 518 271 116 0 chr2 136289823 136289952 -114397902 + MIR SINE MIR 13 156 -106 23 68 0 0 chr2 136290149 136290193 -114397661 + AT_rich Low_complexity Low_complexity 1 44 0 7031 169 72 12 chr2 136290591 136291147 -114396707 + L1PB4 LINE L1 3624 4145 -2153 1363 191 78 25 chr2 136291147 136291293 -114396561 + AluJo SINE Alu 1 138 -174 2387 84 0 3 chr2 136291293 136291604 -114396250 + AluY SINE Alu 1 310 -1 1363 191 78 25 chr2 136291604 136291740 -114396114 + AluJo SINE Alu 138 298 -14 7031 169 72 12 chr2 136291740 136293555 -114394299 + L1PB4 LINE L1 4145 6278 -20 21 71 0 0 chr2 136293724 136293766 -114394088 + AT_rich Low_complexity Low_complexity 1 42 0 310 264 74 16 chr2 136293817 136293938 -114393916 + L1MC4a LINE L1 4688 4815 -1331 425 295 95 39 chr2 136294099 136294514 -114393340 + L1MC4a LINE L1 5045 5485 -765 367 331 52 30 chr2 136294541 136294906 -114392948 + L1MC4a LINE L1 5552 5924 -1884 922 151 16 36 chr2 136296110 136296302 -114391552 + MER5A DNA MER1_type 1 188 -1 718 171 97 65 chr2 136296311 136296528 -114391326 - MER58A DNA MER1_type 0 224 1 247 294 188 6 chr2 136296534 136296694 -114391160 - MIR SINE MIR -1 261 73 2657 94 89 5 chr2 136297284 136297679 -114390175 - MSTA LTR MaLR 0 428 1 741 174 14 7 chr2 136297680 136297818 -114390036 - MLT1A1 LTR MaLR 0 365 227 206 345 69 11 chr2 136297908 136297995 -114389859 - MIR SINE MIR -169 93 2 547 208 214 19 chr2 136298244 136298398 -114389456 + MIR SINE MIR 5 188 -74 841 106 8 0 chr2 136298403 136298535 -114389319 + L1MA5A LINE L1 6161 6293 -4 530 120 22 0 chr2 136298537 136298629 -114389225 + L1M LINE L1 5312 5405 -775 361 183 0 24 chr2 136298629 136298699 -114389155 + L1MB4 LINE L1 6101 6180 0 25 0 0 0 chr2 136298708 136298733 -114389121 + AT_rich Low_complexity Low_complexity 1 25 0 657 259 35 25 chr2 136300957 136301158 -114386696 - MLT1I LTR MaLR 0 409 207 527 310 43 31 chr2 136301498 136301756 -114386098 + MLT1J LTR MaLR 224 484 -27 13987 157 61 40 chr2 136301869 136304978 -114382876 - L1PBa LINE L1 -3667 3195 6 180 97 0 0 chr2 136305432 136305463 -114382391 + (A)n Simple_repeat Simple_repeat 1 31 0 2253 79 4 0 chr2 136305467 136305747 -114382107 + AluY SINE Alu 1 281 -30 188 33 0 33 chr2 136305750 136305780 -114382074 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1616 229 55 17 chr2 136306859 136307315 -114380539 - Charlie4a DNA MER1_type -1455 506 30 1851 122 0 42 chr2 136307315 136307601 -114380253 - AluSx SINE Alu -38 274 1 1616 229 55 17 chr2 136307601 136307616 -114380238 - Charlie4a DNA MER1_type -1931 30 17 1732 162 6 50 chr2 136307733 136308054 -114379800 + AluJb SINE Alu 1 307 -5 277 208 267 30 chr2 136309883 136309984 -114377870 - MIR SINE MIR -91 171 47 21 82 0 0 chr2 136311408 136311457 -114376397 + AT_rich Low_complexity Low_complexity 1 49 0 199 306 35 47 chr2 136312694 136312779 -114375075 + MIR SINE MIR 21 104 -158 247 326 157 41 chr2 136312794 136312928 -114374926 + L2 LINE L2 2841 2958 -314 2069 162 11 11 chr2 136312928 136313293 -114374561 + MLT1A1 LTR MaLR 1 365 0 247 326 157 41 chr2 136313293 136313501 -114374353 + L2 LINE L2 2958 3223 -49 514 198 0 10 chr2 136313583 136313679 -114374175 + MIR SINE MIR 98 192 -70 13374 193 17 30 chr2 136313707 136320324 -114367530 + L1PB1 LINE L1 8 6867 0 186 43 0 0 chr2 136320335 136320358 -114367496 + (TTAAA)n Simple_repeat Simple_repeat 5 27 0 217 203 68 27 chr2 136320364 136320438 -114367416 + MIR SINE MIR 186 262 0 572 260 152 25 chr2 136320751 136320981 -114366873 + MIR SINE MIR 10 262 0 290 336 44 62 chr2 136321190 136321416 -114366438 + MIR SINE MIR 3 224 -38 279 0 0 0 chr2 136322011 136322042 -114365812 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 896 130 0 0 chr2 136324025 136324148 -114363706 + AluSq/x SINE Alu 1 123 -190 237 307 0 13 chr2 136324626 136324701 -114363153 + (CATATA)n Simple_repeat Simple_repeat 5 78 0 1087 269 46 57 chr2 136324750 136325204 -114362650 - MLT1J2 LTR MaLR 0 450 2 645 164 7 62 chr2 136326181 136326327 -114361527 + L1MA2 LINE L1 6167 6304 0 30 27 0 0 chr2 136326333 136326370 -114361484 + AT_rich Low_complexity Low_complexity 1 37 0 3446 140 21 11 chr2 136326680 136327245 -114360609 - L1PA16 LINE L1 -2 6164 5594 262 366 30 15 chr2 136327249 136327380 -114360474 - MIR3 SINE MIR -61 147 15 202 250 36 0 chr2 136328146 136328202 -114359652 + L2 LINE L2 3209 3266 -6 2250 123 0 0 chr2 136330252 136330561 -114357293 - AluSg SINE Alu -1 309 1 543 217 14 29 chr2 136330943 136331081 -114356773 + MIR SINE MIR 90 225 -37 348 24 0 0 chr2 136331410 136331451 -114356403 + (TG)n Simple_repeat Simple_repeat 2 42 0 2135 118 0 10 chr2 136331452 136331749 -114356105 - AluSx SINE Alu -18 294 1 516 116 0 0 chr2 136331749 136331835 -114356019 + (TC)n Simple_repeat Simple_repeat 1 86 0 393 22 0 0 chr2 136331835 136331881 -114355973 + (TA)n Simple_repeat Simple_repeat 1 46 0 631 253 47 18 chr2 136331948 136332118 -114355736 - MIR SINE MIR -74 188 14 530 224 164 26 chr2 136332524 136332676 -114355178 + MER5A DNA MER1_type 11 183 -6 1993 109 18 28 chr2 136332792 136333110 -114354744 + AluSp SINE Alu 1 315 0 477 89 0 0 chr2 136333973 136334067 -114353787 + AluSp/q SINE Alu 227 320 0 195 310 63 51 chr2 136334928 136335086 -114352768 - MIR3 SINE MIR -21 187 28 599 248 159 28 chr2 136335251 136335465 -114352389 - MIR SINE MIR -17 245 4 1991 157 83 0 chr2 136335469 136335807 -114352047 + MER47A DNA MER2_type 1 366 0 25 31 0 0 chr2 136337308 136337340 -114350514 + AT_rich Low_complexity Low_complexity 1 32 0 707 287 61 9 chr2 136337447 136337677 -114350177 - MIR SINE MIR -19 243 2 2135 134 0 0 chr2 136339357 136339655 -114348199 - AluSg SINE Alu -12 298 1 323 263 25 0 chr2 136339798 136339878 -114347976 + MIR SINE MIR 5 86 -176 201 261 22 0 chr2 136340004 136340050 -114347804 + L2 LINE L2 3210 3256 -16 203 176 0 0 chr2 136340260 136340294 -114347560 + (TATG)n Simple_repeat Simple_repeat 3 36 0 220 280 104 48 chr2 136340740 136340865 -114346989 + L2 LINE L2 3182 3313 0 21 0 0 0 chr2 136346250 136346271 -114341583 + AT_rich Low_complexity Low_complexity 1 21 0 2462 70 3 0 chr2 136346271 136346573 -114341281 + AluY SINE Alu 1 303 -8 27 29 0 0 chr2 136348518 136348552 -114339302 + AT_rich Low_complexity Low_complexity 1 34 0 265 278 139 28 chr2 136350605 136350713 -114337141 + MIR SINE MIR 25 144 -64 394 281 182 31 chr2 136351780 136351972 -114335882 + MIR SINE MIR 23 243 -19 339 318 66 26 chr2 136352025 136352176 -114335678 + MIR3 SINE MIR 30 186 -22 218 278 0 0 chr2 136352670 136352724 -114335130 + (CATA)n Simple_repeat Simple_repeat 3 56 0 228 290 0 16 chr2 136354293 136354311 -114333543 + MER3 DNA MER1_type 30 46 -163 557 246 8 8 chr2 136354311 136354437 -114333417 - MER3 DNA MER1_type 0 209 84 7312 127 48 24 chr2 136354449 136354730 -114333124 - Tigger3b DNA MER2_type -1797 1231 958 2268 77 0 61 chr2 136354730 136355042 -114332812 + AluY SINE Alu 1 293 -18 7312 127 48 24 chr2 136355042 136355962 -114331892 - Tigger3b DNA MER2_type -2070 958 1 254 49 98 29 chr2 136356261 136356363 -114331491 + (TA)n Simple_repeat Simple_repeat 2 110 0 261 236 0 0 chr2 136356948 136357003 -114330851 - MLT1J LTR MaLR -347 164 110 1974 159 0 10 chr2 136357473 136357781 -114330073 + AluJo SINE Alu 1 305 -7 2652 47 0 0 chr2 136357782 136358083 -114329771 + AluY SINE Alu 1 301 -10 2356 93 10 0 chr2 136359177 136359487 -114328367 + AluSp SINE Alu 1 313 0 927 260 104 75 chr2 136360227 136360415 -114327439 - MLT1J LTR MaLR -2 509 328 2316 114 0 0 chr2 136360415 136360721 -114327133 - AluSc SINE Alu -3 306 1 927 260 104 75 chr2 136360721 136361024 -114326830 - MLT1J LTR MaLR -183 328 4 1874 116 68 14 chr2 136361127 136361419 -114326435 + AluSc SINE Alu 1 308 -1 28 86 0 0 chr2 136361547 136361617 -114326237 + AT_rich Low_complexity Low_complexity 1 70 0 201 332 99 97 chr2 136361660 136362103 -114325751 + L2 LINE L2 2824 3267 -5 213 39 0 0 chr2 136362357 136362383 -114325471 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 213 217 141 54 chr2 136362663 136362755 -114325099 - L2 LINE L2 -20 3252 3153 776 201 43 27 chr2 136364740 136364924 -114322930 + MER20 DNA MER1_type 30 216 -3 281 300 0 107 chr2 136365962 136366039 -114321815 + MIR3 SINE MIR 10 65 -143 2334 81 17 0 chr2 136366039 136366334 -114321520 - AluSx SINE Alu -12 300 1 281 300 0 107 chr2 136366334 136366406 -114321448 + MIR3 SINE MIR 65 143 -65 723 210 164 50 chr2 136367658 136367939 -114319915 - L1MC4a LINE L1 -1747 6061 5749 2376 88 0 3 chr2 136368193 136368500 -114319354 - AluY SINE Alu -5 306 1 234 128 0 0 chr2 136369036 136369075 -114318779 + (GGGA)n Simple_repeat Simple_repeat 4 42 0 197 255 20 0 chr2 136369387 136369438 -114318416 + MIR SINE MIR 100 151 -111 451 233 69 17 chr2 136369745 136369861 -114317993 + L2 LINE L2 3191 3312 -1 843 280 60 95 chr2 136370490 136371621 -114316233 - L1M4 LINE L1 -2026 4120 3029 362 338 13 19 chr2 136371722 136371876 -114315978 + L1M4 LINE L1 4209 4361 -1785 457 323 48 18 chr2 136371948 136372177 -114315677 + L1M4 LINE L1 5152 5387 -759 * 5619 136 11 10 chr2 136372176 136373103 -114314751 - L1M1 LINE L1 -5973 1592 665 513 235 34 8 chr2 136373169 136373288 -114314566 + L2 LINE L2 3191 3312 -1 3671 145 32 0 chr2 136373298 136373919 -114313935 - L1M1 LINE L1 -6909 656 16 290 215 25 16 chr2 136374754 136374875 -114312979 + (TATG)n Simple_repeat Simple_repeat 2 123 0 584 283 59 7 chr2 136374966 136375118 -114312736 + MIR3 SINE MIR 33 192 -16 4261 272 167 8 chr2 136375323 136376891 -114310963 - L2 LINE L2 -1306 2008 192 207 0 0 0 chr2 136377156 136377179 -114310675 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 412 274 103 0 chr2 136377335 136377481 -114310373 - MARNA DNA Mariner -213 373 213 1727 197 0 13 chr2 136377673 136377972 -114309882 - AluJo SINE Alu -17 295 1 234 0 0 0 chr2 136379319 136379345 -114308509 + (CAG)n Simple_repeat Simple_repeat 2 27 0 210 291 101 13 chr2 136379367 136379446 -114308408 + MIR SINE MIR 42 127 -81 436 201 29 14 chr2 136379671 136379810 -114308044 + MER53 DNA DNA 3 143 -46 272 225 70 116 chr2 136379851 136379980 -114307874 + MER5B DNA MER1_type 56 178 0 7278 43 5 2 chr2 136380253 136381536 -114306318 + L1PA5 LINE L1 4863 6149 -5 212 149 64 43 chr2 136381751 136381798 -114306056 + MIR SINE MIR 107 154 -108 851 176 11 85 chr2 136381880 136382005 -114305849 - MER5A DNA MER1_type -1 188 79 2070 120 0 7 chr2 136382005 136382316 -114305538 - AluSc SINE Alu 0 309 1 851 176 11 85 chr2 136382316 136382377 -114305477 - MER5A DNA MER1_type -110 79 15 254 286 26 0 chr2 136382397 136382474 -114305380 - MIR SINE MIR -108 154 76 1908 157 0 22 chr2 136383683 136383996 -114303858 + AluJb SINE Alu 1 306 -6 1885 127 16 16 chr2 136385664 136385978 -114301876 + MLT1A1 LTR MaLR 11 324 -41 315 0 0 0 chr2 136386733 136386768 -114301086 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2403 99 0 0 chr2 136386948 136387252 -114300602 + AluSg SINE Alu 1 304 -6 898 181 105 132 chr2 136387273 136387681 -114300173 - MLT1C LTR MaLR -66 401 5 1005 304 108 31 chr2 136388253 136388450 -114299404 - L2 LINE L2 0 3313 3133 1685 129 4 42 chr2 136388450 136388763 -114299091 + AluSx SINE Alu 32 334 0 1005 304 108 31 chr2 136388763 136388860 -114298994 - L2 LINE L2 -180 3133 3045 2800 91 107 0 chr2 136388860 136389299 -114298555 - LTR19A LTR ERV1 0 486 1 1005 304 108 31 chr2 136389299 136389752 -114298102 - L2 LINE L2 -268 3045 2502 1180 296 64 18 chr2 136389752 136390231 -114297623 - LTR33A LTR ERVL 0 523 19 3213 178 38 2 chr2 136390231 136390815 -114297039 - MER6A DNA MER2_type 0 605 1 1180 296 64 18 chr2 136390815 136390835 -114297019 - LTR33A LTR ERVL -504 19 1 296 176 0 0 chr2 136390852 136390903 -114296951 - L2 LINE L2 -817 2497 2447 479 299 0 34 chr2 136391098 136391302 -114296552 + MER117 DNA MER1_type 1 197 0 1559 193 0 0 chr2 136391866 136392130 -114295724 - AluJb SINE Alu -10 302 39 351 297 61 34 chr2 136394226 136394374 -114293480 - L2 LINE L2 0 3272 3121 780 250 0 0 chr2 136394550 136394710 -114293144 + MER5B DNA MER1_type 1 160 -18 198 346 75 57 chr2 136394744 136394903 -114292951 - L2 LINE L2 -300 2972 2811 364 381 41 0 chr2 136395932 136396126 -114291728 - MIR SINE MIR -15 247 46 357 233 125 23 chr2 136396336 136396512 -114291342 - Charlie8 DNA MER1_type -2152 265 72 245 289 48 64 chr2 136396526 136396713 -114291141 + L1MEd LINE L1 413 596 -5934 379 213 25 0 chr2 136396772 136396852 -114291002 - MER81 DNA DNA 0 114 33 309 313 49 37 chr2 136397134 136397297 -114290557 + L1MEd LINE L1 856 1020 -5510 392 263 72 38 chr2 136397401 136397663 -114290191 + L1MEd LINE L1 960 1230 -5300 460 281 93 72 chr2 136397664 136397998 -114289856 + L1MEd LINE L1 1758 2098 -4442 353 223 139 30 chr2 136398367 136398569 -114289285 + L1MEd LINE L1 2541 2764 -3776 294 252 33 60 chr2 136398664 136398815 -114289039 - MER112 DNA MER1_type -110 150 4 525 266 26 29 chr2 136398818 136399128 -114288726 + L1ME1 LINE L1 5649 5967 -195 303 195 69 19 chr2 136399947 136400076 -114287778 - LTR26E LTR ERV1 -3 557 397 276 256 22 11 chr2 136400199 136400289 -114287565 - MER72 LTR ERV1 -261 461 371 405 311 20 7 chr2 136402114 136402265 -114285589 + MIR SINE MIR 92 244 -18 324 48 0 0 chr2 136402277 136402319 -114285535 + (TTA)n Simple_repeat Simple_repeat 2 43 0 2304 89 0 7 chr2 136402332 136402625 -114285229 - AluSg SINE Alu -19 291 1 282 333 0 11 chr2 136403135 136403222 -114284632 - L2 LINE L2 -1 3312 3227 407 276 90 0 chr2 136403854 136403999 -114283855 - LTR16C LTR ERVL -5 486 329 322 183 171 0 chr2 136403999 136404081 -114283773 - MER45A DNA AcHobo 0 178 83 354 256 70 8 chr2 136404137 136404266 -114283588 - LTR16C LTR ERVL -169 322 186 242 240 83 73 chr2 136404651 136404747 -114283107 + MIR3 SINE MIR 84 180 -28 1201 223 119 48 chr2 136405016 136405496 -114282358 + MLT2B1 LTR ERVL 1 514 -6 1635 128 78 75 chr2 136406692 136407091 -114280763 - MSTB1 LTR MaLR 0 432 33 186 320 150 61 chr2 136408082 136408229 -114279625 + MIR SINE MIR 29 188 -74 1788 140 0 49 chr2 136408689 136408997 -114278857 + AluJb SINE Alu 20 312 0 1975 115 57 4 chr2 136409105 136409384 -114278470 + AluSx SINE Alu 1 294 -18 249 274 81 12 chr2 136409549 136409682 -114278172 + MIR SINE MIR 4 150 -112 366 266 237 6 chr2 136410285 136410458 -114277396 + MIR SINE MIR 46 258 -4 281 286 41 31 chr2 136410677 136410775 -114277079 + MIR SINE MIR 96 194 -68 1973 233 12 14 chr2 136411034 136411533 -114276321 - L1ME1 LINE L1 -5 6230 5733 7269 243 77 23 chr2 136411573 136414804 -114273050 - L1ME1 LINE L1 -935 5280 1890 426 285 83 31 chr2 136414845 136415073 -114272781 - L1ME1 LINE L1 -6028 368 129 211 205 0 0 chr2 136415081 136415120 -114272734 + (TG)n Simple_repeat Simple_repeat 2 40 0 205 336 107 33 chr2 136418884 136419006 -114268848 + L3b LINE CR1 1125 1255 -328 1887 165 110 11 chr2 136419166 136419548 -114268306 + MSTB LTR MaLR 3 422 -4 245 279 73 0 chr2 136420172 136420240 -114267614 - L2 LINE L2 -1 3271 3199 258 314 86 0 chr2 136420423 136420528 -114267326 - MIR SINE MIR -37 225 112 2186 97 6 26 chr2 136421364 136421675 -114266179 - AluSc SINE Alu -4 305 1 2303 151 62 5 chr2 136422567 136422970 -114264884 - MSTB LTR MaLR 0 426 1 721 230 111 9 chr2 136423339 136423556 -114264298 + MIR SINE MIR 2 240 -22 2054 73 26 0 chr2 136425726 136425999 -114261855 - L1PA5 LINE L1 0 6154 5875 545 128 21 0 chr2 136428000 136428094 -114259760 + MER5A DNA MER1_type 9 104 -85 328 235 10 29 chr2 136428250 136428352 -114259502 - MER103 DNA DNA -19 147 48 547 227 117 18 chr2 136430058 136430221 -114257633 - MER5A DNA MER1_type 0 189 11 260 292 15 0 chr2 136430827 136430892 -114256962 + L2 LINE L2 3204 3269 -3 712 277 153 23 chr2 136433240 136433893 -114253961 - L2 LINE L2 0 3313 2570 384 244 252 0 chr2 136433907 136434026 -114253828 + MER3 DNA MER1_type 1 149 -60 239 74 0 74 chr2 136434076 136434130 -114253724 + MER3 DNA MER1_type 137 186 -23 2364 62 3 56 chr2 136434187 136434508 -114253346 + AluY SINE Alu 1 304 -7 1493 194 3 38 chr2 136434522 136434841 -114253013 + AluJo SINE Alu 1 308 -4 477 276 286 3 chr2 136434866 136435250 -114252604 - L2 LINE L2 -833 2481 1989 2306 121 0 0 chr2 136436313 136436620 -114251234 - AluSg SINE Alu -2 308 2 2056 117 7 20 chr2 136436621 136436921 -114250933 - AluSx SINE Alu -16 296 1 426 215 21 0 chr2 136438170 136438263 -114249591 + L1MA10 LINE L1 6239 6333 -1 396 0 0 0 chr2 136438744 136438788 -114249066 + (TG)n Simple_repeat Simple_repeat 2 45 0 196 287 115 11 chr2 136439902 136439989 -114247865 - L2 LINE L2 -5 3308 3213 2242 118 3 0 chr2 136443323 136443628 -114244226 + AluSx SINE Alu 7 312 0 253 357 0 0 chr2 136444008 136444092 -114243762 + L2 LINE L2 3188 3271 -1 701 286 28 20 chr2 136447683 136447931 -114239923 + MIR SINE MIR 10 259 -3 502 354 38 0 chr2 136449540 136449777 -114238077 + MIR SINE MIR 17 262 0 252 0 0 0 chr2 136450189 136450217 -114237637 + (A)n Simple_repeat Simple_repeat 1 28 0 295 250 134 81 chr2 136450312 136450484 -114237370 + Charlie8 DNA MER1_type 96 276 -2141 21 0 0 0 chr2 136450645 136450666 -114237188 + AT_rich Low_complexity Low_complexity 1 21 0 955 190 45 0 chr2 136450877 136451056 -114236798 - MER5A DNA MER1_type 0 189 3 346 272 181 11 chr2 136452051 136452264 -114235590 + MIR SINE MIR 10 250 -12 21 0 0 0 chr2 136453858 136453879 -114233975 + AT_rich Low_complexity Low_complexity 1 21 0 222 118 0 0 chr2 136454932 136454966 -114232888 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 23 0 0 0 chr2 136457556 136457579 -114230275 + AT_rich Low_complexity Low_complexity 1 23 0 293 347 42 6 chr2 136460674 136460841 -114227013 - MER5B DNA MER1_type 0 178 6 210 360 12 0 chr2 136460836 136460922 -114226932 - MIR3 SINE MIR -41 167 81 * 2221 124 0 7 chr2 136462986 136463293 -114224561 + AluSx SINE Alu 1 305 -7 228 167 0 0 chr2 136463948 136463996 -114223858 + CT-rich Low_complexity Low_complexity 4 51 0 213 222 206 0 chr2 136464505 136464568 -114223286 - MIR SINE MIR -111 151 76 1515 183 87 0 chr2 136464660 136464971 -114222883 - L1MB7 LINE L1 0 6184 5847 194 88 0 29 chr2 136465083 136465117 -114222737 + (GAATG)n Simple_repeat Simple_repeat 1 33 0 205 254 56 14 chr2 136465462 136465533 -114222321 - MIR3 SINE MIR -26 182 109 192 167 0 0 chr2 136467165 136467213 -114220641 + CT-rich Low_complexity Low_complexity 2 49 0 180 0 0 0 chr2 136467586 136467606 -114220248 + (CA)n Simple_repeat Simple_repeat 2 21 0 527 300 108 29 chr2 136468214 136468454 -114219400 - MLT1L LTR MaLR 0 615 357 2571 57 0 0 chr2 136470746 136471045 -114216809 + AluY SINE Alu 1 299 -12 1991 91 61 0 chr2 136471528 136471791 -114216063 + AluY SINE Alu 1 279 -32 252 0 0 0 chr2 136471791 136471819 -114216035 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1071 169 0 0 chr2 136472143 136472309 -114215545 - AluSc SINE Alu -13 296 131 3935 201 48 12 chr2 136472330 136473226 -114214628 - L1MC4a LINE L1 -1 7807 6880 192 255 0 0 chr2 136473276 136473323 -114214531 - MIR SINE MIR -72 136 90 355 245 151 6 chr2 136524432 136524591 -114163263 + L1MCc LINE L1 25 206 -6217 244 300 0 0 chr2 136524648 136524708 -114163146 + L1MCc LINE L1 609 668 -5754 284 308 94 40 chr2 136525009 136525531 -114162323 + L1MCc LINE L1 816 1365 -5058 3995 174 7 19 chr2 136525871 136526591 -114161263 - MER50 LTR ERV1 -23 711 1 790 254 133 39 chr2 136527025 136527355 -114160499 + MLT1A1 LTR MaLR 1 361 -4 322 268 39 24 chr2 136527380 136527507 -114160347 - MLT1A2 LTR MaLR -15 359 231 242 196 0 20 chr2 136527703 136527754 -114160100 - MLT1A2 LTR MaLR -319 55 6 572 269 114 97 chr2 136528289 136528876 -114158978 + L2 LINE L2 1937 2533 -781 491 307 174 25 chr2 136528927 136529447 -114158407 + L2 LINE L2 2696 3283 -30 277 200 46 15 chr2 136529468 136529533 -114158321 + MER69 DNA AcHobo 1 67 -2459 395 264 36 14 chr2 136529682 136529822 -114158032 + MER69 DNA AcHobo 2380 2522 -4 29 32 0 48 chr2 136530124 136530186 -114157668 + AT_rich Low_complexity Low_complexity 1 59 0 1042 176 78 135 chr2 136530605 136530924 -114156930 + AluJb SINE Alu 1 301 -1 710 309 75 25 chr2 136532124 136532444 -114155410 - MER102b DNA MER1_type -4 337 2 1035 190 9 19 chr2 136532886 136533097 -114154757 + AluJb SINE Alu 84 292 -20 1361 87 16 0 chr2 136533346 136533529 -114154325 - AluY SINE Alu -21 290 105 293 246 51 34 chr2 136533537 136533655 -114154199 + MLT1H1 LTR MaLR 75 194 -361 526 235 74 43 chr2 136533767 136533929 -114153925 + MLT1H1 LTR MaLR 381 547 -8 648 267 70 13 chr2 136534102 136534317 -114153537 - MIR SINE MIR -26 236 18 562 250 16 68 chr2 136534938 136535130 -114152724 + MIR SINE MIR 81 262 0 23 0 0 0 chr2 136535437 136535460 -114152394 + AT_rich Low_complexity Low_complexity 1 23 0 816 286 9 0 chr2 136535730 136535961 -114151893 - L1 LINE L1 -1800 4346 4114 343 251 29 0 chr2 136536309 136536484 -114151370 + (TA)n Simple_repeat Simple_repeat 1 180 0 426 233 17 33 chr2 136537998 136538118 -114149736 + MER5A DNA MER1_type 4 121 -68 322 260 0 13 chr2 136538873 136538950 -114148904 + GA-rich Low_complexity Low_complexity 6 81 0 1027 275 28 7 chr2 136540798 136541085 -114146769 + AluJo SINE Alu 2 294 -8 1607 183 50 31 chr2 136541189 136541302 -114146552 - Zaphod DNA AcHobo -35 3996 3887 1800 130 0 40 chr2 136541302 136541603 -114146251 - AluJb SINE Alu -23 289 1 1607 183 50 31 chr2 136541603 136541717 -114146137 - Zaphod DNA AcHobo -144 3887 3777 2329 155 14 3 chr2 136541717 136542079 -114145775 - MER47A DNA MER2_type 0 366 1 1607 183 50 31 chr2 136542079 136542233 -114145621 - Zaphod DNA AcHobo -254 3777 3607 * 2480 202 139 23 chr2 136542232 136542959 -114144895 - Zaphod DNA AcHobo -3056 975 165 32 43 0 0 chr2 136543722 136543768 -114144086 + AT_rich Low_complexity Low_complexity 1 46 0 2655 184 24 17 chr2 136544467 136544934 -114142920 + MER70A LTR ERVL 3 472 0 289 245 122 54 chr2 136545389 136545536 -114142318 - MIR SINE MIR -34 228 72 965 267 105 102 chr2 136546881 136547507 -114140347 + MER21B LTR ERV1 24 651 -212 21 0 0 0 chr2 136548104 136548125 -114139729 + AT_rich Low_complexity Low_complexity 1 21 0 1429 90 50 0 chr2 136548138 136548339 -114139515 + MSTC LTR MaLR 1 211 -217 3585 137 14 26 chr2 136548445 136548500 -114139354 + L1MA4A LINE L1 5042 5096 -1207 2435 118 44 16 chr2 136548500 136548865 -114138989 + THE1C LTR MaLR 1 375 0 3585 137 14 26 chr2 136548865 136549634 -114138220 + L1MA4A LINE L1 5096 5856 -447 2536 143 10 10 chr2 136549818 136550230 -114137624 + L1MA4A LINE L1 5883 6294 -9 1352 178 13 4 chr2 136550249 136550479 -114137375 + MSTC LTR MaLR 197 428 0 21 0 0 0 chr2 136550702 136550723 -114137131 + AT_rich Low_complexity Low_complexity 1 21 0 898 195 11 16 chr2 136551265 136551450 -114136404 + L1PB1 LINE L1 12 195 -6668 14504 187 26 18 chr2 136551456 136555681 -114132173 + L1PB1 LINE L1 637 5146 -1721 189 0 0 0 chr2 136555681 136555702 -114132152 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 14504 187 26 18 chr2 136555702 136557437 -114130417 + L1PB1 LINE L1 5146 6867 0 21 0 0 0 chr2 136557437 136557458 -114130396 + AT_rich Low_complexity Low_complexity 1 21 0 235 164 33 0 chr2 136559712 136559773 -114128081 + GA-rich Low_complexity Low_complexity 5 67 0 301 227 50 59 chr2 136561086 136561205 -114126649 - L2 LINE L2 -23 3290 3173 205 379 48 18 chr2 136561401 136561628 -114126226 + L2 LINE L2 1761 1994 -1320 342 355 117 25 chr2 136561654 136561978 -114125876 + L2 LINE L2 2148 2501 -813 453 128 0 46 chr2 136561991 136562100 -114125754 + (TA)n Simple_repeat Simple_repeat 2 105 0 554 161 125 83 chr2 136563418 136563586 -114124268 + MER5B DNA MER1_type 1 175 -3 653 216 5 116 chr2 136563598 136563797 -114124057 - MER5B DNA MER1_type -1 177 1 814 160 231 0 chr2 136563949 136564105 -114123749 - AluJo SINE Alu -119 193 2 229 362 103 27 chr2 136564778 136564963 -114122891 - L2 LINE L2 -163 3109 2911 399 309 23 78 chr2 136565011 136565225 -114122629 - L2 LINE L2 -469 2845 2644 673 227 7 21 chr2 136565225 136565366 -114122488 - MER5B DNA MER1_type 0 178 40 1695 226 70 48 chr2 136565366 136565825 -114122029 + MLT2B1 LTR ERVL 1 473 -47 261 0 0 0 chr2 136565825 136565854 -114122000 + (TG)n Simple_repeat Simple_repeat 2 30 0 1695 226 70 48 chr2 136565854 136565893 -114121961 + MLT2B1 LTR ERVL 473 510 -10 241 184 0 0 chr2 136565903 136565941 -114121913 - MER5B DNA MER1_type -138 40 3 1986 130 0 27 chr2 136566214 136566514 -114121340 + AluSg SINE Alu 1 292 -18 228 35 0 0 chr2 136566518 136566547 -114121307 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 314 263 12 12 chr2 136567547 136567627 -114120227 + MER5A DNA MER1_type 30 109 -80 224 302 95 32 chr2 136567687 136567876 -114119978 + L2 LINE L2 2887 3087 -185 393 293 57 0 chr2 136569126 136569266 -114118588 - MIR SINE MIR -38 224 77 771 223 198 87 chr2 136569428 136569839 -114118015 + LTR21A LTR ERV1 1 465 -40 234 0 0 0 chr2 136569839 136569865 -114117989 + (TC)n Simple_repeat Simple_repeat 1 26 0 771 223 198 87 chr2 136569865 136569892 -114117962 + LTR21A LTR ERV1 465 488 -17 2046 122 0 20 chr2 136570135 136570429 -114117425 - AluSx SINE Alu -24 288 1 566 209 181 33 chr2 136571006 136571188 -114116666 - MER63A DNA MER1_type 0 210 2 1023 221 6 0 chr2 136571384 136571565 -114116289 + MER5A DNA MER1_type 1 182 -7 1906 232 93 6 chr2 136571706 136572198 -114115656 + MLT1F LTR MaLR 1 535 -7 2160 88 3 11 chr2 136572232 136572516 -114115338 + AluSc SINE Alu 14 295 -14 238 304 200 0 chr2 136572975 136573100 -114114754 - MIR SINE MIR -56 206 57 327 339 101 0 chr2 136573845 136574013 -114113841 + L2 LINE L2 3080 3264 -8 408 169 11 11 chr2 136574036 136574125 -114113729 + (TA)n Simple_repeat Simple_repeat 2 90 0 253 219 0 0 chr2 136574125 136574189 -114113665 - L1MC4 LINE L1 -1339 6703 6640 294 58 0 135 chr2 136574192 136574244 -114113610 + MER2 DNA MER2_type 12 56 -289 363 223 0 0 chr2 136574253 136574269 -114113585 + (TA)n Simple_repeat Simple_repeat 2 17 -78 1688 116 83 22 chr2 136574269 136574546 -114113308 + AluSx SINE Alu 1 294 -18 363 223 0 0 chr2 136574546 136574623 -114113231 + (TA)n Simple_repeat Simple_repeat 16 95 0 243 130 0 0 chr2 136574625 136574671 -114113183 - LTR66 LTR ERVL -171 439 394 198 103 0 0 chr2 136574671 136574700 -114113154 + (CA)n Simple_repeat Simple_repeat 2 30 0 1390 157 48 51 chr2 136574797 136574899 -114112955 + MER2 DNA MER2_type 54 155 -190 2426 140 79 2 chr2 136574899 136575293 -114112561 - MSTA LTR MaLR 0 428 5 1390 157 48 51 chr2 136575293 136575483 -114112371 + MER2 DNA MER2_type 155 345 0 370 85 0 0 chr2 136575485 136575532 -114112322 + MLT2C1 LTR ERVL 351 397 0 360 287 131 65 chr2 136576143 136576465 -114111389 + MLT1J LTR MaLR 151 492 -19 368 267 40 10 chr2 136576747 136576848 -114111006 + MIR3 SINE MIR 93 196 -12 2319 90 0 3 chr2 136577702 136577992 -114109862 - AluSc SINE Alu -20 289 1 450 283 62 7 chr2 136578734 136578879 -114108975 - MIR SINE MIR -48 214 62 333 0 0 0 chr2 136580640 136580677 -114107177 + (T)n Simple_repeat Simple_repeat 1 37 0 257 257 162 22 chr2 136581209 136581345 -114106509 - MER5A DNA MER1_type 0 189 35 * 650 186 21 7 chr2 136581228 136581368 -114106486 + MER5A DNA MER1_type 48 189 0 425 206 199 15 chr2 136581680 136581816 -114106038 + MER5A DNA MER1_type 23 183 -6 296 24 0 24 chr2 136581840 136581882 -114105972 + (CA)n Simple_repeat Simple_repeat 2 42 0 2224 162 35 10 chr2 136582357 136582846 -114105008 + LTR28 LTR ERV1 1 598 -130 345 243 50 71 chr2 136582916 136583056 -114104798 + LTR27 LTR ERV1 500 636 0 1717 166 51 59 chr2 136583192 136583566 -114104288 + LTR39 LTR ERV1 29 399 -384 1463 180 16 4 chr2 136583555 136583810 -114104044 + LTR39 LTR ERV1 526 783 0 * 512 273 159 37 chr2 136583902 136584034 -114103820 - MLT1J LTR MaLR -39 472 357 3007 114 91 9 chr2 136584034 136584497 -114103357 + MER61D LTR ERV1 1 501 0 512 273 159 37 chr2 136584497 136584767 -114103087 - MLT1J LTR MaLR -154 357 21 364 336 8 8 chr2 136585065 136585196 -114102658 - MIR3 SINE MIR -30 178 48 300 286 0 0 chr2 136585293 136585377 -114102477 - MIR SINE MIR 0 262 179 1937 152 35 17 chr2 136585386 136585739 -114102115 + MLT1A1 LTR MaLR 1 365 0 2099 150 0 3 chr2 136586167 136586480 -114101374 + AluSx SINE Alu 1 312 0 456 264 60 42 chr2 136587676 136587843 -114100011 + MLT1G1 LTR MaLR 12 181 -414 414 255 45 64 chr2 136587846 136588003 -114099851 + MLT1H1 LTR MaLR 402 555 0 19773 148 29 27 chr2 136588045 136589283 -114098571 + L1P3 LINE L1 2 1235 -5226 272 70 23 0 chr2 136589283 136589326 -114098528 + (CAA)n Simple_repeat Simple_repeat 2 45 0 19773 148 29 27 chr2 136589326 136592593 -114095261 + L1P3 LINE L1 1235 4539 -1922 * 43390 42 7 8 chr2 136592592 136598751 -114089103 - L1PA4 LINE L1 0 6155 1 1063 152 11 0 chr2 136598785 136598963 -114088891 + L1P3 LINE L1 4554 4733 -1728 25 0 0 0 chr2 136600290 136600315 -114087539 + AT_rich Low_complexity Low_complexity 1 25 0 264 190 13 89 chr2 136600625 136600704 -114087150 - MIR SINE MIR -171 91 19 21 0 0 0 chr2 136601792 136601813 -114086041 + AT_rich Low_complexity Low_complexity 1 21 0 400 143 205 27 chr2 136602382 136602494 -114085360 - MER58C DNA MER1_type -5 210 79 180 0 0 0 chr2 136602494 136602514 -114085340 + (A)n Simple_repeat Simple_repeat 1 20 0 781 182 0 0 chr2 136602665 136602797 -114085057 + FLAM_A SINE Alu 11 142 0 192 171 0 0 chr2 136602960 136602995 -114084859 + L2 LINE L2 3015 3049 -223 423 244 70 61 chr2 136603733 136603946 -114083908 - MER112 DNA MER1_type -13 247 33 763 258 27 31 chr2 136603965 136604221 -114083633 + MIR SINE MIR 7 261 -1 180 218 59 69 chr2 136604214 136604315 -114083539 - MIR SINE MIR -56 206 107 * 196 325 36 12 chr2 136605363 136605446 -114082408 - MIR SINE MIR -106 102 18 11921 116 34 16 chr2 136605475 136607317 -114080537 - Tigger2 DNA MER2_type 0 2718 844 291 140 0 0 chr2 136607528 136607578 -114080276 + (A)n Simple_repeat Simple_repeat 1 50 0 6471 87 18 2 chr2 136607591 136608318 -114079536 + L1PA8 LINE L1 4452 5166 -1006 185 0 40 0 chr2 136608318 136608343 -114079511 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 6471 87 18 2 chr2 136608343 136609294 -114078560 + L1PA8 LINE L1 5166 6169 -3 1134 240 75 7 chr2 136609916 136610208 -114077646 - MER46C DNA MER2_type 0 338 27 232 114 0 0 chr2 136610901 136610936 -114076918 - MIR SINE MIR -109 153 119 25 0 0 0 chr2 136611476 136611501 -114076353 + AT_rich Low_complexity Low_complexity 1 25 0 1147 158 16 0 chr2 136612132 136612316 -114075538 - MER5A DNA MER1_type -2 187 1 985 89 8 191 chr2 136612391 136612627 -114075227 - 7SK RNA RNA 0 193 1 345 284 0 0 chr2 136612662 136612757 -114075097 - MIR SINE MIR -118 144 50 440 299 43 34 chr2 136613579 136613786 -114074068 + MIR SINE MIR 25 233 -29 204 272 32 40 chr2 136614769 136614894 -114072960 - L2 LINE L2 -77 3236 3113 374 254 8 56 chr2 136615224 136615350 -114072504 + MLT1J LTR MaLR 392 511 0 250 286 0 14 chr2 136615844 136615914 -114071940 - L2 LINE L2 -11 3261 3193 579 305 25 25 chr2 136616198 136616434 -114071420 - L2 LINE L2 -457 2857 2622 1299 174 28 37 chr2 136617307 136617636 -114070218 + MER33 DNA MER1_type 1 319 -5 383 288 98 90 chr2 136618935 136619324 -114068530 - L1MC4a LINE L1 -1706 6102 5711 217 232 43 14 chr2 136619374 136619443 -114068411 + CT-rich Low_complexity Low_complexity 5 75 0 245 259 17 0 chr2 136619449 136619507 -114068347 - L2 LINE L2 0 3272 3214 1749 220 241 19 chr2 136620216 136620785 -114067069 - MER39 LTR ERV1 -3 704 10 328 230 60 40 chr2 136620857 136620957 -114066897 - L2 LINE L2 -8 3305 3204 1662 231 37 49 chr2 136622346 136622559 -114065295 + MLT1D LTR MaLR 1 215 -290 1924 190 25 6 chr2 136622559 136622917 -114064937 + MLT1A1 LTR MaLR 1 365 0 1662 231 37 49 chr2 136622917 136623214 -114064640 + MLT1D LTR MaLR 215 505 0 225 254 24 79 chr2 136624488 136624614 -114063240 + LTR67 LTR ERVL 432 550 -7 620 217 89 6 chr2 136624680 136624837 -114063017 - MER5B DNA MER1_type -6 172 3 698 326 25 12 chr2 136625411 136625653 -114062201 - LTR67 LTR ERVL -311 246 2 437 241 22 44 chr2 136626350 136626487 -114061367 - MER5A DNA MER1_type -46 143 10 414 127 36 0 chr2 136627042 136627152 -114060702 + (TA)n Simple_repeat Simple_repeat 2 115 0 880 244 6 0 chr2 136627168 136627324 -114060530 + FAM SINE Alu 1 157 -18 2141 75 27 20 chr2 136627570 136627862 -114059992 + AluY SINE Alu 1 294 -17 610 109 18 0 chr2 136627866 136627976 -114059878 + (TA)n Simple_repeat Simple_repeat 2 113 0 1423 226 86 50 chr2 136628995 136629530 -114058324 - MLT1E3 LTR MaLR -3 502 1 209 315 83 95 chr2 136631148 136631558 -114056296 - L2 LINE L2 0 3272 2868 959 189 63 46 chr2 136631566 136631804 -114056050 + MLT1B LTR MaLR 1 242 -148 22 0 0 0 chr2 136632653 136632675 -114055179 + AT_rich Low_complexity Low_complexity 1 22 0 186 222 0 0 chr2 136635003 136635039 -114052815 + MIR3 SINE MIR 152 187 -21 266 397 27 0 chr2 136636913 136637140 -114050714 + GA-rich Low_complexity Low_complexity 1 233 0 265 151 0 67 chr2 136637193 136637312 -114050542 + (TA)n Simple_repeat Simple_repeat 1 111 0 308 176 23 53 chr2 136637359 136637490 -114050364 + (TATATG)n Simple_repeat Simple_repeat 2 128 0 739 287 26 49 chr2 136637511 136637776 -114050078 - MIR SINE MIR -2 260 2 566 285 79 36 chr2 136638766 136639071 -114048783 + L2 LINE L2 2995 3312 -1 1412 246 91 90 chr2 136641486 136642037 -114045817 - L1MEd LINE L1 -4866 1253 795 15456 135 20 25 chr2 136642037 136644468 -114043386 + Tigger1 DNA MER2_type 1 2418 0 1412 246 91 90 chr2 136644468 136644912 -114042942 - L1MEd LINE L1 -5324 795 353 304 278 61 56 chr2 136645913 136646093 -114041761 + HERVL LTR ERVL 3283 3463 -2191 907 264 83 0 chr2 136646343 136646559 -114041295 - MIR SINE MIR -27 235 2 326 244 26 13 chr2 136646964 136647042 -114040812 + MLT1H LTR MaLR 97 175 -374 2471 148 40 22 chr2 136649110 136649555 -114038299 - L1MB2 LINE L1 0 6171 5719 429 89 0 0 chr2 136649565 136649621 -114038233 - L1MB2 LINE L1 -606 5577 5522 * 2058 150 12 3 chr2 136649620 136649946 -114037908 - L1M3 LINE L1 -442 5729 5401 273 343 84 80 chr2 136650170 136650421 -114037433 + L2 LINE L2 3016 3267 -5 263 254 0 0 chr2 136651228 136651283 -114036571 - L2 LINE L2 -8 3264 3210 277 262 119 48 chr2 136651814 136651982 -114035872 - MER58A DNA MER1_type -19 205 26 1200 181 5 0 chr2 136652010 136652215 -114035639 - AluJb SINE Alu -22 290 85 2593 74 0 0 chr2 136652921 136653230 -114034624 - AluSx SINE Alu -3 309 1 410 189 22 22 chr2 136653430 136653520 -114034334 + LTR40b LTR ERVL 373 462 0 2252 337 83 49 chr2 136653832 136657339 -114030515 + HERVL LTR ERVL 393 3992 -1662 1302 326 68 42 chr2 136657448 136658252 -114029602 + HERVL LTR ERVL 4175 4999 -765 422 265 148 30 chr2 136658987 136659324 -114028530 + L2 LINE L2 2717 3090 -223 2081 163 3 0 chr2 136662041 136662366 -114025488 - L1PA16 LINE L1 0 6166 5841 300 256 0 0 chr2 136663620 136663702 -114024152 - L1ME4a LINE L1 0 6121 6040 296 314 149 23 chr2 136663714 136663943 -114023911 - MIR SINE MIR -4 258 3 1777 276 33 27 chr2 136664797 136665348 -114022506 - MER68 LTR ERV1 -8 554 1 1020 257 120 48 chr2 136665530 136665946 -114021908 + MLT1H LTR MaLR 102 547 -2 351 367 34 11 chr2 136666340 136666604 -114021250 + L2 LINE L2 3044 3313 0 736 261 44 30 chr2 136666775 136666978 -114020876 - MIR SINE MIR -38 224 19 2991 196 14 4 chr2 136667080 136667594 -114020260 + LTR53 LTR ERVL 1 519 0 237 280 43 65 chr2 136669387 136669480 -114018374 + MIR3 SINE MIR 83 173 -35 363 23 0 0 chr2 136671165 136671209 -114016645 + (CA)n Simple_repeat Simple_repeat 2 45 0 23 54 0 0 chr2 136671315 136671352 -114016502 + AT_rich Low_complexity Low_complexity 1 37 0 34295 87 62 7 chr2 136671399 136677207 -114010647 + L1PA6 LINE L1 13 6148 -6 213 271 23 53 chr2 136677210 136677343 -114010511 + GA-rich Low_complexity Low_complexity 5 133 0 973 266 115 25 chr2 136677455 136677933 -114009921 + HAL1b LINE L1 313 833 -515 808 289 25 0 chr2 136678213 136678448 -114009406 - L2 LINE L2 0 3313 3073 252 0 0 0 chr2 136678524 136678552 -114009302 + (CA)n Simple_repeat Simple_repeat 1 28 0 2190 111 3 25 chr2 136680156 136680495 -114007359 + AluSg SINE Alu 1 310 0 1405 198 72 44 chr2 136681386 136681841 -114006013 + MER110A LTR ERV1 1 468 0 209 283 101 0 chr2 136682440 136682539 -114005315 + L2 LINE L2 3199 3307 -6 446 349 0 8 chr2 136683158 136683284 -114004570 + L2 LINE L2 3148 3272 0 316 349 48 16 chr2 136683348 136683474 -114004380 + L2 LINE L2 3125 3254 -18 360 340 13 72 chr2 136685434 136685825 -114002029 + L2 LINE L2 2934 3301 -12 22 0 0 0 chr2 136686150 136686172 -114001682 + AT_rich Low_complexity Low_complexity 1 22 0 1984 116 0 0 chr2 136687264 136687531 -114000323 - AluSq SINE Alu -46 267 1 22 65 0 0 chr2 136688891 136688922 -113998932 + AT_rich Low_complexity Low_complexity 1 31 0 186 71 0 0 chr2 136689959 136689987 -113997867 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1293 140 0 5 chr2 136690579 136690779 -113997075 + AluSg/x SINE Alu 105 303 -9 7418 205 31 30 chr2 136690781 136692838 -113995016 - L1 LINE L1 -985 5161 3103 288 70 0 0 chr2 136694101 136694144 -113993710 + (TG)n Simple_repeat Simple_repeat 2 44 0 249 290 58 45 chr2 136695331 136695486 -113992368 + L3 LINE CR1 786 942 -635 708 294 55 23 chr2 136695631 136695974 -113991880 + L1ME3A LINE L1 1 354 -5691 379 275 42 0 chr2 136747336 136747456 -113940398 + L1ME3A LINE L1 4411 4535 -2029 22 35 0 0 chr2 136747488 136747517 -113940337 + AT_rich Low_complexity Low_complexity 1 29 0 840 254 73 99 chr2 136747723 136748287 -113939567 + L1ME3A LINE L1 6027 6575 -13 2019 151 52 1 chr2 136748295 136748673 -113939181 + L1MC2 LINE L1 5751 6149 -195 1307 121 2 0 chr2 136748776 136750366 -113937488 + ALR/Alpha Satellite centromeric 1 1593 -8 232 180 131 0 chr2 136750709 136750770 -113937084 + L1 LINE L1 2757 2825 -3321 274 219 98 0 chr2 136750792 136750874 -113936980 + LTR50 LTR ERVL 1 90 -705 907 242 103 54 chr2 136751101 136751338 -113936516 + LTR50 LTR ERVL 426 687 -108 2231 112 7 0 chr2 136751338 136751642 -113936212 - AluSg SINE Alu -4 306 1 907 242 103 54 chr2 136751642 136751755 -113936099 + LTR50 LTR ERVL 687 793 -2 399 221 62 35 chr2 136751823 136751936 -113935918 + L1 LINE L1 3531 3646 -2500 1989 69 0 4 chr2 136752065 136752312 -113935542 - AluY SINE Alu -65 246 1 1415 146 10 87 chr2 136752396 136752809 -113935045 - Tigger4(Zombi) DNA MER2_type -9 2722 1 24 77 0 0 chr2 136752976 136753028 -113934826 + AT_rich Low_complexity Low_complexity 1 52 0 733 272 0 0 chr2 136753159 136753321 -113934533 + AluJb SINE Alu 147 308 -4 1279 208 68 3 chr2 136753563 136753885 -113933969 + L1 LINE L1 4142 4484 -1662 225 119 0 0 chr2 136753992 136754034 -113933820 + (GA)n Simple_repeat Simple_repeat 2 43 0 201 176 0 0 chr2 136754120 136754154 -113933700 + (CAA)n Simple_repeat Simple_repeat 2 35 0 492 32 0 0 chr2 136755276 136755338 -113932516 + (TATG)n Simple_repeat Simple_repeat 2 63 0 1862 122 0 21 chr2 136755338 136755625 -113932229 - AluSx SINE Alu -31 281 1 509 177 2 74 chr2 136755758 136755902 -113931952 - MER39B LTR ERV1 -242 411 192 420 200 0 0 chr2 136755912 136756032 -113931822 + GA-rich Low_complexity Low_complexity 2 121 0 615 192 0 0 chr2 136756050 136756217 -113931637 + GA-rich Low_complexity Low_complexity 1 167 0 353 146 0 12 chr2 136756239 136756321 -113931533 + (GA)n Simple_repeat Simple_repeat 1 81 0 5934 87 16 37 chr2 136756421 136757351 -113930503 - SVA Other Other -43 1343 433 5402 83 26 12 chr2 136757417 136758347 -113929507 - SVA Other Other -520 866 50 743 30 0 10 chr2 136758353 136758452 -113929402 + (GGGAGA)n Simple_repeat Simple_repeat 1 98 0 1177 134 2 0 chr2 136758456 136758797 -113929057 - ALR/Alpha Satellite centromeric 0 341 1 3303 142 11 4 chr2 136758904 136759672 -113928182 + L1P5 LINE L1 4939 5713 -438 897 278 26 13 chr2 136759825 136760052 -113927802 - AluJo SINE Alu -82 230 1 2371 89 0 10 chr2 136760075 136760389 -113927465 - AluY SINE Alu 0 311 1 659 315 60 31 chr2 136760558 136761073 -113926781 - HAL1 LINE L1 -760 1747 1218 431 249 99 108 chr2 136761239 136761592 -113926262 + HAL1 LINE L1 1550 1899 -608 25 65 0 0 chr2 136761766 136761812 -113926042 + AT_rich Low_complexity Low_complexity 1 46 0 1013 284 81 44 chr2 136761861 136762429 -113925425 - L2 LINE L2 -1328 1986 1398 1628 260 81 22 chr2 136762545 136762898 -113924956 - L1ME2 LINE L1 -291 5873 5471 2330 96 0 0 chr2 136762898 136763191 -113924663 - AluSq SINE Alu -20 293 1 1628 260 81 22 chr2 136763191 136763418 -113924436 - L1ME2 LINE L1 -693 5471 5259 489 259 14 22 chr2 136763422 136763561 -113924293 - L1ME LINE L1 -5659 411 274 880 233 125 21 chr2 136763574 136763861 -113923993 - MER2 DNA MER2_type -28 317 1 721 229 28 41 chr2 136763861 136764079 -113923775 - L1ME2 LINE L1 -2404 3742 3528 865 168 0 7 chr2 136764155 136764298 -113923556 + AluJb SINE Alu 4 145 -167 207 0 0 0 chr2 136764311 136764334 -113923520 + (TG)n Simple_repeat Simple_repeat 2 24 0 714 265 63 20 chr2 136764372 136764674 -113923180 - L1ME2 LINE L1 -2686 3460 3146 834 216 65 5 chr2 136764686 136764885 -113922969 - MER34 LTR ERV1 -11 531 321 783 200 0 0 chr2 136764894 136765029 -113922825 + AluJo SINE Alu 2 136 -176 269 250 80 27 chr2 136765068 136765180 -113922674 - MER34 LTR ERV1 -273 269 152 180 179 0 0 chr2 136765180 136765219 -113922635 + CT-rich Low_complexity Low_complexity 3 41 0 24 77 0 0 chr2 136766088 136766140 -113921714 + AT_rich Low_complexity Low_complexity 1 52 0 547 261 40 40 chr2 136766238 136766414 -113921440 + MIR SINE MIR 41 216 -46 518 247 136 0 chr2 136766886 136767040 -113920814 - MIR SINE MIR -27 235 61 183 42 0 0 chr2 136767929 136767953 -113919901 + (CCTA)n Simple_repeat Simple_repeat 3 26 0 1065 171 58 5 chr2 136768802 136769007 -113918847 + L1MC2 LINE L1 6129 6344 0 349 271 10 0 chr2 136769234 136769330 -113918524 + GA-rich Low_complexity Low_complexity 1 97 0 1782 181 0 0 chr2 136770004 136770296 -113917558 - AluJb SINE Alu -20 292 1 2014 129 0 65 chr2 136771488 136771813 -113916041 - AluSg SINE Alu -6 304 1 1356 196 103 0 chr2 136771841 136772122 -113915732 - AluSx SINE Alu -2 310 1 2246 113 0 3 chr2 136772147 136772458 -113915396 - AluY SINE Alu 0 311 2 2009 156 7 0 chr2 136772503 136772810 -113915044 - AluSx SINE Alu -3 309 1 361 262 21 21 chr2 136773626 136773771 -113914083 - MIR SINE MIR -56 206 62 646 295 103 39 chr2 136775194 136775815 -113912039 - L1MC5 LINE L1 -39 7922 7262 4180 107 8 89 chr2 136776042 136776764 -113911090 + MER4A LTR ERV1 1 664 0 686 292 68 8 chr2 136777513 136777763 -113910091 - L2 LINE L2 -2313 1001 737 664 224 0 14 chr2 136778151 136778294 -113909560 - L1ME1 LINE L1 -5 6161 6021 845 289 83 64 chr2 136779729 136779924 -113907930 - L2 LINE L2 -1988 1326 1136 2112 119 3 0 chr2 136779924 136780218 -113907636 - AluSq SINE Alu -14 299 5 845 289 83 64 chr2 136780218 136780585 -113907269 - L2 LINE L2 -2178 1136 753 2113 194 46 28 chr2 136780716 136781175 -113906679 + MLT1C LTR MaLR 1 467 0 464 211 39 29 chr2 136781294 136781398 -113906456 + MLT1H LTR MaLR 57 161 -388 193 0 94 0 chr2 136781662 136781694 -113906160 + T-rich Low_complexity Low_complexity 2 36 0 921 182 97 0 chr2 136781707 136781883 -113905971 - AluJb SINE Alu -119 193 1 366 303 44 64 chr2 136781947 136782244 -113905610 + L1 LINE L1 2788 3078 -3068 463 252 19 0 chr2 136782286 136782393 -113905461 - MIR SINE MIR -44 218 110 1878 140 7 0 chr2 136782473 136782765 -113905089 - AluSq SINE Alu -19 294 1 304 259 55 109 chr2 136783045 136783148 -113904706 + L1 LINE L1 3589 3677 -2469 270 56 0 0 chr2 136783148 136783184 -113904670 + (CAA)n Simple_repeat Simple_repeat 1 36 0 304 259 55 109 chr2 136783184 136783281 -113904573 + L1 LINE L1 3677 3778 -2368 1251 185 123 15 chr2 136783569 136783829 -113904025 + AluJo SINE Alu 1 288 -24 1036 140 0 12 chr2 136783931 136784095 -113903759 - AluSg/x SINE Alu -4 308 147 2286 77 14 0 chr2 136784395 136784707 -113903147 + L1PA10 LINE L1 5860 6175 0 833 221 0 0 chr2 136784955 136785104 -113902750 + FRAM SINE Alu 1 148 -28 2318 77 7 0 chr2 136785106 136785404 -113902450 - AluSc SINE Alu -9 300 1 24 53 0 0 chr2 136785404 136785442 -113902412 + AT_rich Low_complexity Low_complexity 1 38 0 1784 219 61 9 chr2 136785633 136786226 -113901628 - MER21B LTR ERV1 -2 861 200 254 267 19 6 chr2 136786473 136786598 -113901256 - MER5A DNA MER1_type -2 187 3 189 74 0 0 chr2 136787041 136787068 -113900786 + (CA)n Simple_repeat Simple_repeat 2 28 0 548 238 0 0 chr2 136787492 136787666 -113900188 + ACRO1 Satellite acromeric 1 174 -46 1113 130 3 0 chr2 136788081 136789343 -113898511 + ACRO1 Satellite acromeric 1 1265 -55 805 186 35 119 chr2 136790040 136790352 -113897502 - L1MB8 LINE L1 -43 6135 5850 275 376 28 0 chr2 136791679 136791820 -113896034 + MIR SINE MIR 20 164 -98 2441 33 0 0 chr2 136792043 136792318 -113895536 + AluYa5 SINE Alu 36 310 -1 1366 84 0 0 chr2 136792318 136792485 -113895369 + AluSc SINE Alu 132 298 -11 1783 153 121 62 chr2 136793283 136793720 -113894134 + MER31B LTR ERV1 1 463 -3 1503 118 89 8 chr2 136794945 136795182 -113892672 - MER44D DNA MER2_type -3 602 292 1199 133 0 6 chr2 136795186 136795359 -113892495 + LOR1a LTR ERV1 326 497 0 2198 180 5 11 chr2 136795359 136795732 -113892122 + MER31B-int LTR ERV1 1 371 -7749 1310 206 21 0 chr2 136795746 136795984 -113891870 + MER31B-int LTR ERV1 208 450 -7670 8263 126 34 32 chr2 136796029 136797477 -113890377 + MER31B-int LTR ERV1 423 1873 -6247 8181 114 28 30 chr2 136797477 136797629 -113890225 + LOR1-int LTR ERV1 3765 3916 -3219 1600 196 3 13 chr2 136797629 136797930 -113889924 + AluJo SINE Alu 1 298 -14 8181 114 28 30 chr2 136797930 136799231 -113888623 + LOR1-int LTR ERV1 3916 5024 -2111 873 218 163 35 chr2 136799421 136799770 -113888084 + MLT1C LTR MaLR 1 408 -59 2276 100 0 13 chr2 136799773 136800082 -113887772 - AluSx SINE Alu -7 305 1 1795 243 64 91 chr2 136800106 136800592 -113887262 + LOR1b-int LTR ERV1 5015 5487 -2633 1127 153 0 6 chr2 136800595 136800772 -113887082 + LOR1b-int LTR ERV1 7944 8119 -1 2292 158 127 5 chr2 136800773 136801184 -113886670 + LOR1b LTR ERV1 1 461 0 315 93 0 0 chr2 136801189 136801232 -113886622 - MER44D DNA MER2_type -572 133 91 2928 148 26 9 chr2 136801253 136801712 -113886142 + LTR24 LTR ERV1 1 467 0 900 200 0 0 chr2 136801733 136801881 -113885973 + Tigger7 DNA MER2_type 3 150 -583 762 155 26 0 chr2 136801881 136801997 -113885857 - LOR1b LTR ERV1 0 461 343 1538 183 14 77 chr2 136802005 136802056 -113885798 + LTR24-int LTR ERV1 27 80 -5043 4520 134 5 2 chr2 136802056 136802689 -113885165 + MER41B LTR ERV1 1 635 0 1538 183 14 77 chr2 136802689 136803157 -113884697 + LTR24-int LTR ERV1 80 651 -4472 251 390 53 30 chr2 136803180 136803349 -113884505 + MER4B-int LTR ERV1 402 574 -6184 271 247 13 13 chr2 136803455 136803532 -113884322 + MER4B-int LTR ERV1 655 731 -4392 4204 170 101 8 chr2 136804580 136805334 -113882520 + LTR1B LTR ERV1 1 824 -2 383 282 86 15 chr2 136806647 136806741 -113881113 + LTR16A1 LTR ERVL 201 287 -204 2761 58 3 0 chr2 136806741 136807070 -113880784 + L1PA5 LINE L1 5824 6153 -1 383 282 86 15 chr2 136807070 136807192 -113880662 + LTR16A1 LTR ERVL 287 491 0 1274 204 110 16 chr2 136807329 136807638 -113880216 - LTR51 LTR ERV1 -99 572 235 1800 183 3 6 chr2 136807906 136808218 -113879636 + AluJb SINE Alu 1 311 -1 420 319 21 0 chr2 136808971 136809115 -113878739 + MIR SINE MIR 40 186 -76 6003 86 11 0 chr2 136809263 136810067 -113877787 - L1PA8 LINE L1 -6 6166 5354 * 10163 138 7 14 chr2 136810054 136811711 -113876143 - L1P3 LINE L1 -3214 3247 1604 1510 200 8 4 chr2 136811716 136811981 -113875873 - L1P3 LINE L1 -6186 275 10 1341 259 75 52 chr2 136811993 136812189 -113875665 + L1ME1 LINE L1 3841 4031 -2115 1803 166 0 10 chr2 136812189 136812490 -113875364 + AluSx SINE Alu 15 312 0 1341 259 75 52 chr2 136812490 136812970 -113874884 + L1ME1 LINE L1 4031 4533 -1613 23 54 0 0 chr2 136813596 136813633 -113874221 + AT_rich Low_complexity Low_complexity 1 37 0 3811 192 47 23 chr2 136814351 136814433 -113873421 - L1PA16 LINE L1 -90 6779 6700 1996 120 3 0 chr2 136814433 136814746 -113873108 - AluSx SINE Alu 0 314 1 3811 192 47 23 chr2 136814746 136815619 -113872235 - L1PA16 LINE L1 -169 6700 5769 5890 33 0 0 chr2 136815619 136816264 -113871590 + L1PA3 LINE L1 5508 6152 -3 3811 192 47 23 chr2 136816264 136816799 -113871055 - L1PA16 LINE L1 -1100 5769 5248 295 246 62 24 chr2 136816812 136816886 -113870968 - L1 LINE L1 -3459 2687 2601 2423 11 4 0 chr2 136816886 136817151 -113870703 - AluY SINE Alu -9 302 37 295 246 62 24 chr2 136817151 136817207 -113870647 - L1 LINE L1 -3545 2601 2549 257 168 0 0 chr2 136817212 136817261 -113870593 - L1PA16 LINE L1 -3666 3183 3135 1456 160 0 0 chr2 136817295 136817520 -113870334 - L1PA16 LINE L1 -6622 227 3 236 241 51 82 chr2 136817866 136818061 -113869793 - MER53 DNA DNA 0 189 1 1594 148 0 0 chr2 136818294 136818530 -113869324 + AluSq SINE Alu 78 313 0 832 244 19 19 chr2 136818851 136819064 -113868790 - MER4D LTR ERV1 -8 895 683 6124 234 60 23 chr2 136819079 136821371 -113866483 + L1M3 LINE L1 3232 5610 -570 2342 218 61 19 chr2 136821620 136822686 -113865168 + L1ME1 LINE L1 4748 5931 -235 2150 167 36 19 chr2 136823416 136823942 -113863912 + TAR1 Satellite telomeric 1 534 -43 320 116 0 47 chr2 136824086 136824172 -113863682 + (TTAGGG)n Simple_repeat Simple_repeat 2 83 0 243 260 163 8 chr2 136824564 136824687 -113863167 - L1MC5 LINE L1 -542 7419 7278 828 188 0 8 chr2 136824854 136824982 -113862872 + FLAM_C SINE Alu 3 129 -14 2230 102 0 3 chr2 136825137 136825431 -113862423 + AluSc SINE Alu 5 297 -12 4524 205 91 12 chr2 136825621 136826671 -113861183 - L1MD2 LINE L1 -10 6349 5218 258 148 33 16 chr2 136826681 136826742 -113861112 + LTR37A LTR ERV1 365 426 0 3774 235 44 12 chr2 136827019 136827832 -113860022 - Cheshire DNA MER1_type -1490 930 84 1842 172 3 3 chr2 136827832 136828123 -113859731 + AluJb SINE Alu 1 291 -21 3774 235 44 12 chr2 136828123 136828210 -113859644 - Cheshire DNA MER1_type -2336 84 1 2252 227 115 24 chr2 136828240 136829224 -113858630 + L1ME2 LINE L1 4565 5616 -550 2030 145 21 0 chr2 136829299 136829589 -113858265 + AluSc SINE Alu 1 296 -13 718 161 51 0 chr2 136829893 136830011 -113857843 - FAM SINE Alu -41 144 21 1112 190 101 0 chr2 136830110 136830378 -113857476 + L1ME2 LINE L1 5584 5878 -286 * 1884 147 16 16 chr2 136830368 136830666 -113857188 + L1MB2 LINE L1 5547 5843 -328 2251 100 0 13 chr2 136830666 136830977 -113856877 + AluY SINE Alu 1 307 -4 1884 147 16 16 chr2 136830977 136831239 -113856615 + L1MB2 LINE L1 5843 6170 -1 1347 256 87 15 chr2 136831307 136831767 -113856087 - LTR40a LTR ERVL -2 517 25 648 184 59 0 chr2 136831940 136832092 -113855762 + MER63 DNA MER1_type 2 162 -768 789 221 77 21 chr2 136832095 136832380 -113855474 + L1ME2 LINE L1 5854 6154 -10 587 286 40 4 chr2 136832543 136832770 -113855084 - L1M4 LINE L1 -1214 4932 4698 1969 103 41 4 chr2 136832812 136833083 -113854771 - AluSg SINE Alu -4 306 26 988 240 108 51 chr2 136833846 136834255 -113853599 + MLT1H LTR MaLR 110 541 -8 324 374 9 0 chr2 136834258 136834365 -113853489 - L1M4 LINE L1 -2326 3820 3713 373 322 63 21 chr2 136834731 136835126 -113852728 - L1ME LINE L1 -298 5823 5414 1736 157 13 51 chr2 136835275 136835587 -113852267 + AluJo SINE Alu 1 300 -12 290 121 0 52 chr2 136836113 136836171 -113851683 - MLT1I LTR MaLR -6 403 349 1221 253 34 0 chr2 136838099 136838364 -113849490 + AluJb SINE Alu 1 274 -38 250 118 0 0 chr2 136838683 136838717 -113849137 - MER91 DNA MER1_type -161 35 2 676 221 19 71 chr2 136839236 136839503 -113848351 + MER112 DNA MER1_type 1 253 -3 433 241 71 9 chr2 136839577 136839689 -113848165 + MIR SINE MIR 18 136 -126 543 69 0 0 chr2 136839689 136839761 -113848093 + THE1B LTR MaLR 1 72 -292 4164 103 8 2 chr2 136839778 136840371 -113847483 + THE1B-int LTR MaLR 984 1580 0 2277 112 32 64 chr2 136840371 136840557 -113847297 + THE1B LTR MaLR 1 171 -193 1948 139 14 3 chr2 136840557 136840844 -113847010 + AluSc SINE Alu 5 294 -15 2277 112 32 64 chr2 136840844 136841032 -113846822 + THE1B LTR MaLR 171 363 -1 2404 139 3 11 chr2 136841065 136841431 -113846423 - THE1B LTR MaLR 0 364 2 912 227 12 32 chr2 136842202 136842453 -113845401 - MLT1A2 LTR MaLR -1 373 128 610 280 38 32 chr2 136842703 136843049 -113844805 + L1MC4 LINE L1 7694 8041 -1 573 238 72 62 chr2 136843670 136844102 -113843752 + L1MC5 LINE L1 7227 7662 -299 496 328 16 11 chr2 136844197 136844386 -113843468 + MLT1H LTR MaLR 84 273 -276 388 249 53 95 chr2 136844693 136844862 -113842992 + L1MC5 LINE L1 7768 7929 -32 1494 226 15 51 chr2 136844876 136845288 -113842566 + MLT2C1 LTR ERVL 1 397 0 508 234 72 0 chr2 136845385 136845496 -113842358 - MER5C DNA MER1_type -203 121 3 220 284 64 46 chr2 136845515 136845624 -113842230 + MIR SINE MIR 112 222 -40 2259 102 10 3 chr2 136846104 136846409 -113841445 + AluSx SINE Alu 1 307 -5 1024 344 41 17 chr2 136846811 136847230 -113840624 + LTR33 LTR ERVL 91 519 -2 629 167 42 42 chr2 136847360 136847504 -113840350 - MER5C DNA MER1_type -1 323 180 870 240 159 39 chr2 136848214 136848647 -113839207 - LTR33 LTR ERVL 0 521 37 325 304 17 26 chr2 136848891 136849006 -113838848 - L1MC5 LINE L1 -279 7682 7569 1946 91 41 66 chr2 136849099 136849418 -113838436 - AluY SINE Alu 0 311 1 902 44 114 0 chr2 136849431 136849545 -113838309 - AluY SINE Alu -179 132 6 5669 31 18 0 chr2 136850879 136851551 -113836303 + L1PA4 LINE L1 5469 6152 -3 2330 104 3 0 chr2 136852257 136852565 -113835289 + AluSg SINE Alu 1 309 -1 1877 107 65 0 chr2 136853058 136853348 -113834506 + L1PA10 LINE L1 5860 6168 0 1015 205 70 10 chr2 136853534 136853988 -113833866 - MER21B LTR ERV1 -132 799 208 298 248 62 5 chr2 136854242 136854367 -113833487 - MER5A DNA MER1_type -2 187 3 233 57 29 0 chr2 136854800 136854835 -113833019 + (CA)n Simple_repeat Simple_repeat 1 36 0 550 228 0 0 chr2 136855259 136855522 -113832332 + ACRO1 Satellite acromeric 1 263 -31 702 181 0 0 chr2 136855847 136856065 -113831789 + ACRO1 Satellite acromeric 1 218 -2 206 154 0 26 chr2 136857278 136857317 -113830537 + CT-rich Low_complexity Low_complexity 4 41 0 1046 122 205 65 chr2 136859585 136859848 -113828006 - AluSg SINE Alu 0 300 1 293 123 0 35 chr2 136859896 136859953 -113827901 + (CATA)n Simple_repeat Simple_repeat 4 58 0 249 33 0 0 chr2 136860087 136860117 -113827737 + (TTCC)n Simple_repeat Simple_repeat 2 31 0 305 272 0 11 chr2 136860193 136860285 -113827569 + AluJb SINE Alu 167 257 -45 297 109 0 0 chr2 136860287 136860333 -113827521 + (GGGTG)n Simple_repeat Simple_repeat 3 48 0 588 29 0 0 chr2 136860459 136860529 -113827325 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 683 192 8 139 chr2 136860562 136860696 -113827158 - AluJb SINE Alu -81 231 148 225 119 0 0 chr2 136860696 136860738 -113827116 + (TATG)n Simple_repeat Simple_repeat 4 45 0 683 192 8 139 chr2 136860738 136860869 -113826985 - AluJb SINE Alu -164 148 1 337 190 63 0 chr2 136861008 136861087 -113826767 - FLAM_C SINE Alu -26 107 24 222 37 0 0 chr2 136861194 136861221 -113826633 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1495 142 0 5 chr2 136861223 136861441 -113826413 - AluSp SINE Alu -28 285 69 293 68 23 0 chr2 136861472 136861516 -113826338 + (TTTTC)n Simple_repeat Simple_repeat 1 45 0 244 240 50 40 chr2 136862253 136862353 -113825501 + MER89 LTR ERV1 323 423 -136 405 0 0 0 chr2 136862517 136862562 -113825292 + (CA)n Simple_repeat Simple_repeat 2 46 0 1744 183 0 0 chr2 136862694 136862983 -113824871 + AluSx SINE Alu 1 289 -23 514 197 71 31 chr2 136862998 136863125 -113824729 + AluJb SINE Alu 130 261 -51 966 86 23 17 chr2 136863159 136863334 -113824520 + (TTTC)n Simple_repeat Simple_repeat 1 176 0 234 241 0 0 chr2 136863334 136863388 -113824466 + CT-rich Low_complexity Low_complexity 4 57 0 309 158 0 0 chr2 136863388 136863445 -113824409 - AluJ/FLAM SINE Alu -242 60 4 801 220 136 61 chr2 136863513 136863668 -113824186 - AluJo SINE Alu -16 286 101 2213 108 3 0 chr2 136863668 136863973 -113823881 - AluSp SINE Alu -7 306 1 801 220 136 61 chr2 136863973 136864081 -113823773 - AluJo SINE Alu -201 101 3 214 85 43 64 chr2 136864131 136864178 -113823676 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 811 248 7 54 chr2 136864666 136864944 -113822910 + L1PA13 LINE L1 5888 6152 -11 220 194 0 0 chr2 136864944 136864980 -113822874 + polypurine Low_complexity Low_complexity 2 37 0 1721 140 45 14 chr2 136865076 136865368 -113822486 - AluSx SINE Alu -2 310 10 332 68 0 0 chr2 136865473 136865517 -113822337 + AluSp/q SINE Alu 240 283 -20 207 0 0 0 chr2 136865535 136865558 -113822296 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1578 135 0 16 chr2 136865632 136865910 -113821944 + AluSg SINE Alu 60 310 0 335 340 49 51 chr2 136865963 136866457 -113821397 - L1M4c LINE L1 -5077 1307 815 303 209 0 0 chr2 136866458 136866563 -113821291 + CT-rich Low_complexity Low_complexity 2 106 0 216 0 0 0 chr2 136867472 136867496 -113820358 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 964 111 170 23 chr2 136867859 136868030 -113819824 - AluSg/x SINE Alu -21 291 96 192 77 0 0 chr2 136868092 136868118 -113819736 + (T)n Simple_repeat Simple_repeat 1 26 0 2258 109 0 3 chr2 136868819 136869121 -113818733 - AluSc SINE Alu -8 301 1 186 43 0 0 chr2 136869517 136869540 -113818314 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5040 31 8 2 chr2 136871835 136872471 -113815383 - L1P LINE L1 -932 5214 4575 4813 34 0 0 chr2 136872471 136873020 -113814834 + L1PA3 LINE L1 5593 6153 -2 249 275 28 37 chr2 136873149 136873258 -113814596 - LTR54B LTR ERV1 -352 146 39 417 161 0 97 chr2 136873630 136873723 -113814131 + AluJb SINE Alu 197 280 -32 249 33 0 0 chr2 136873724 136873754 -113814100 + (CAGG)n Simple_repeat Simple_repeat 1 30 0 2192 97 3 0 chr2 136873813 136874101 -113813753 - AluSp SINE Alu -10 303 15 2289 93 0 3 chr2 136874150 136874452 -113813402 - AluY SINE Alu -10 301 1 667 135 119 8 chr2 136874492 136874618 -113813236 - AluJb SINE Alu -172 140 1 363 178 0 56 chr2 136879050 136879157 -113808697 + MER45C DNA AcHobo 485 585 -368 1280 212 80 47 chr2 136881296 136881726 -113806128 + L1MD2 LINE L1 5904 6349 -10 266 309 74 0 chr2 136882239 136882320 -113805534 + MIR3 SINE MIR 89 175 -33 1242 139 1 0 chr2 136882448 136887628 -113800226 + ALR/Alpha Satellite centromeric 1 5182 -6 1229 156 2 1 chr2 136887728 136890529 -113797325 - ALR/Alpha Satellite centromeric 0 2805 1 1198 142 3 0 chr2 136890636 136893166 -113794688 - ALR/Alpha Satellite centromeric 0 2537 1 450 201 6 0 chr2 136893145 136893266 -113794588 - CER Satellite Satellite 0 121 1 * 1189 287 19 40 chr2 136894790 136895260 -113792594 + MLT1C LTR MaLR 3 462 -5 217 247 86 62 chr2 136895267 136895348 -113792506 + MER5A DNA MER1_type 59 141 -48 618 215 70 65 chr2 136895378 136895564 -113792290 - MIR SINE MIR -48 214 28 23 0 0 0 chr2 136895600 136895623 -113792231 + AT_rich Low_complexity Low_complexity 1 23 0 1937 139 30 0 chr2 136895786 136896087 -113791767 - AluSg SINE Alu 0 310 1 2171 109 33 0 chr2 136896298 136896637 -113791217 - AluSp SINE Alu 0 349 1 258 377 83 31 chr2 136896945 136897401 -113790453 + L2 LINE L2 2164 2643 -671 428 126 0 55 chr2 136897452 136897579 -113790275 + (TA)n Simple_repeat Simple_repeat 1 120 0 188 369 51 19 chr2 136897701 136897858 -113789996 + L2 LINE L2 2866 3027 -245 22 56 0 0 chr2 136898255 136898291 -113789563 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr2 136898411 136898439 -113789415 + AT_rich Low_complexity Low_complexity 1 28 0 195 220 0 0 chr2 136899241 136899291 -113788563 + (TA)n Simple_repeat Simple_repeat 2 51 0 22 0 0 0 chr2 136899378 136899400 -113788454 + AT_rich Low_complexity Low_complexity 1 22 0 21 95 0 0 chr2 136899444 136899507 -113788347 + AT_rich Low_complexity Low_complexity 1 63 0 29 47 0 0 chr2 136899562 136899605 -113788249 + AT_rich Low_complexity Low_complexity 1 43 0 13972 33 13 0 chr2 136899659 136902123 -113785731 - L1PA3 LINE L1 -1 6154 3670 1181 132 11 0 chr2 136902287 136902469 -113785385 + AluSg/x SINE Alu 129 312 0 1326 135 4 1 chr2 136902639 136912780 -113775074 - ALR/Alpha Satellite centromeric -1 10168 1 7411 38 0 0 chr2 136912782 136914349 -113773505 - L1PA3 LINE L1 0 6155 4524 3844 113 0 0 chr2 136914449 136914972 -113772882 + SVA Other Other 864 1386 0 1282 135 4 1 chr2 136914984 136923443 -113764411 + ALR/Alpha Satellite centromeric 1 8479 -23 31852 48 33 2 chr2 136923446 136927504 -113760350 + L1P LINE L1 1 4185 -1961 201 288 0 48 chr2 136978050 136978196 -113709658 + (CCG)n Simple_repeat Simple_repeat 3 141 0 1295 119 45 15 chr2 136978758 136978960 -113708894 - AluSg SINE Alu -102 208 1 334 304 59 44 chr2 136979064 136979199 -113708655 + MER5A DNA MER1_type 52 188 -1 1039 79 0 0 chr2 136979990 136980130 -113707724 - AluY SINE Alu -16 295 156 278 258 15 0 chr2 136981489 136981555 -113706299 - MIR3 SINE MIR -47 161 95 1323 170 130 11 chr2 136982029 136982299 -113705555 + AluJb SINE Alu 1 302 0 1317 112 0 35 chr2 136982421 136982618 -113705236 + MER30B DNA MER1_type 1 190 0 737 157 0 0 chr2 136982983 136983098 -113704756 + FLAM_C SINE Alu 1 115 -18 26 0 0 0 chr2 136983100 136983126 -113704728 + AT_rich Low_complexity Low_complexity 1 26 0 232 234 0 47 chr2 136983617 136983681 -113704173 - MER103 DNA DNA -46 120 60 623 71 118 21 chr2 136983998 136984416 -113703438 + (AAATG)n Simple_repeat Simple_repeat 1 458 0 546 39 150 13 chr2 136984428 136984581 -113703273 + (AAATG)n Simple_repeat Simple_repeat 5 178 0 565 60 106 44 chr2 136984628 136984961 -113702893 + (AAATG)n Simple_repeat Simple_repeat 1 353 0 544 84 113 33 chr2 136985011 136985335 -113702519 + (AAATG)n Simple_repeat Simple_repeat 1 349 0 183 83 125 0 chr2 136985359 136985407 -113702447 + (AAATG)n Simple_repeat Simple_repeat 5 58 0 657 64 104 24 chr2 136985419 136985695 -113702159 + (AAATG)n Simple_repeat Simple_repeat 1 297 0 1675 139 182 19 chr2 136985801 136986174 -113701680 + Tigger2a DNA MER2_type 1 434 0 22 56 0 0 chr2 136986400 136986436 -113701418 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr2 136986948 136986984 -113700870 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 136987108 136987129 -113700725 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 136988286 136988307 -113699547 + AT_rich Low_complexity Low_complexity 1 21 0 2227 102 3 3 chr2 136988384 136988688 -113699166 - AluSx SINE Alu -8 304 1 212 147 0 0 chr2 136988725 136988759 -113699095 + (TC)n Simple_repeat Simple_repeat 1 34 0 565 291 73 111 chr2 136988951 136989690 -113698164 - L1MEd LINE L1 -3303 2826 2116 2174 118 0 0 chr2 136989867 136990171 -113697683 + AluSg SINE Alu 1 304 -6 28 29 0 0 chr2 136990519 136990554 -113697300 + AT_rich Low_complexity Low_complexity 1 35 0 301 331 106 23 chr2 136990690 136990992 -113696862 - L1MEd LINE L1 -4867 1252 926 28 29 0 0 chr2 136991037 136991072 -113696782 + AT_rich Low_complexity Low_complexity 1 35 0 295 323 43 0 chr2 136991270 136991363 -113696491 - L1MEd LINE L1 -5493 626 530 534 113 12 0 chr2 136992232 136992338 -113695516 + AluY SINE Alu 200 306 0 599 269 109 16 chr2 136992735 136993130 -113694724 + L1MEc LINE L1 2132 2527 -3688 1997 193 106 12 chr2 136993133 136993557 -113694297 + MLT1C LTR MaLR 4 467 0 326 286 102 25 chr2 136993611 136993807 -113694047 + L1M4 LINE L1 8 218 -6324 331 315 16 0 chr2 136994124 136994251 -113693603 + L1M4 LINE L1 801 929 -5717 1524 218 82 36 chr2 136994433 136995124 -113692730 + L1M4 LINE L1 820 1523 -5022 289 274 7 14 chr2 136995158 136995304 -113692550 + CT-rich Low_complexity Low_complexity 1 145 0 25 0 0 0 chr2 136995594 136995619 -113692235 + AT_rich Low_complexity Low_complexity 1 25 0 516 334 84 32 chr2 136996060 136996407 -113691447 - L2 LINE L2 -499 2815 2451 454 283 55 14 chr2 136997717 136997862 -113689992 + HERVL LTR ERVL 2267 2417 -3237 248 351 127 0 chr2 136998317 136998451 -113689403 - LTR16C LTR ERVL -104 387 237 226 218 0 73 chr2 136998499 136998554 -113689300 - LTR16C LTR ERVL -358 133 83 25 0 0 0 chr2 137000092 137000117 -113687737 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 137000807 137000836 -113687018 + AT_rich Low_complexity Low_complexity 1 29 0 258 291 0 25 chr2 137001036 137001115 -113686739 + (CATA)n Simple_repeat Simple_repeat 3 79 0 25 0 0 0 chr2 137001304 137001329 -113686525 + AT_rich Low_complexity Low_complexity 1 25 0 1585 214 20 6 chr2 137001381 137001723 -113686131 + MER7A DNA MER2_type 2 346 0 634 259 118 63 chr2 137002351 137002630 -113685224 - MER77 LTR ERV1 -6 599 323 4389 254 71 21 chr2 137002793 137004587 -113683267 + L1MB7 LINE L1 3565 5445 -729 2396 218 43 7 chr2 137004603 137005204 -113682650 + L1MB7 LINE L1 5562 6184 0 384 372 51 7 chr2 137005265 137005553 -113682301 - L2 LINE L2 -266 3047 2748 197 295 62 98 chr2 137005574 137005818 -113682036 + L3 LINE CR1 760 994 -583 3080 190 36 8 chr2 137007264 137007927 -113679927 - L1MB3 LINE L1 -1 6182 5501 25 65 0 0 chr2 137008443 137008489 -113679365 + AT_rich Low_complexity Low_complexity 1 46 0 294 29 0 0 chr2 137010074 137010109 -113677745 + (CA)n Simple_repeat Simple_repeat 2 36 0 433 216 26 60 chr2 137011165 137011281 -113676573 - MLT1D LTR MaLR -389 116 5 21 0 0 0 chr2 137011337 137011358 -113676496 + AT_rich Low_complexity Low_complexity 1 21 0 535 206 18 18 chr2 137011369 137011729 -113676125 + GA-rich Low_complexity Low_complexity 1 360 0 757 251 71 14 chr2 137011822 137012189 -113675665 - L1M4 LINE L1 -3509 2637 2250 205 197 53 0 chr2 137013068 137013144 -113674710 + (TA)n Simple_repeat Simple_repeat 1 80 0 1531 198 35 0 chr2 137013174 137013462 -113674392 + AluJb SINE Alu 1 298 -14 198 0 0 0 chr2 137013532 137013554 -113674300 + (A)n Simple_repeat Simple_repeat 1 22 0 310 331 80 17 chr2 137014146 137014321 -113673533 - L1ME3A LINE L1 -6 6164 5979 829 134 8 0 chr2 137014501 137014628 -113673226 + AluYb8 SINE Alu 12 139 -179 1638 240 49 70 chr2 137015418 137015930 -113671924 + MER77 LTR ERV1 103 603 -2 324 0 0 0 chr2 137016965 137017001 -113670853 + (CA)n Simple_repeat Simple_repeat 1 36 0 957 268 69 23 chr2 137017087 137017759 -113670095 - L1MEc LINE L1 -3483 2732 2047 3376 243 42 30 chr2 137017759 137018696 -113669158 + Tigger6a DNA MER2_type 2 955 -642 1682 203 3 3 chr2 137018696 137019002 -113668852 - AluJb SINE Alu -6 306 1 3376 243 42 30 chr2 137019002 137019133 -113668721 + Tigger6a DNA MER2_type 955 1083 0 957 268 69 23 chr2 137019133 137019211 -113668643 - L1MEc LINE L1 -4168 2047 1974 4097 170 23 23 chr2 137019263 137020246 -113667608 + L1PA16 LINE L1 5011 5989 -177 227 200 105 29 chr2 137020347 137020452 -113667402 - L1MEc LINE L1 -4844 1552 1440 312 320 77 6 chr2 137020473 137020629 -113667225 - L1MEc LINE L1 -4868 1245 1079 1198 323 54 16 chr2 137020641 137021377 -113666477 - L1MEc LINE L1 -5483 913 150 250 315 28 42 chr2 137021494 137021637 -113666217 - HAL1b LINE L1 -963 385 245 1431 194 23 78 chr2 137023375 137023761 -113664093 - MLT1A1 LTR MaLR 0 365 1 1790 130 62 76 chr2 137023885 137024254 -113663600 + THE1B LTR MaLR 1 364 0 737 129 4 2 chr2 137024482 137034162 -113653692 - CER Satellite Satellite 0 9707 1 42351 55 3 1 chr2 137034185 137040336 -113647518 + L1PA3 LINE L1 9 6164 0 262 315 63 17 chr2 137040463 137040819 -113647035 + L1MDa LINE L1 1558 1932 -4608 21 0 0 0 chr2 137041040 137041061 -113646793 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 137041186 137041210 -113646644 + AT_rich Low_complexity Low_complexity 1 24 0 397 243 40 27 chr2 137041464 137041612 -113646242 + L1MEc LINE L1 55 204 -6192 297 296 69 63 chr2 137041800 137042422 -113645432 + L1MEc LINE L1 442 1067 -5329 343 326 58 7 chr2 137042460 137042598 -113645256 + L1MEc LINE L1 1078 1222 -4983 806 150 23 0 chr2 137042679 137042812 -113645042 - MSTB1 LTR MaLR -296 136 1 276 221 21 42 chr2 137044224 137044319 -113643535 - LTR48 LTR ERV1 -50 737 645 242 191 16 16 chr2 137044319 137044382 -113643472 + (TA)n Simple_repeat Simple_repeat 1 63 0 1576 179 88 44 chr2 137044416 137044793 -113643061 - LTR49 LTR ERV1 -168 427 29 2038 120 32 0 chr2 137044793 137045077 -113642777 + AluSq SINE Alu 1 293 -20 1576 179 88 44 chr2 137045077 137045108 -113642746 - LTR49 LTR ERV1 -566 29 1 225 0 0 0 chr2 137045223 137045248 -113642606 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 57 0 0 chr2 137045505 137045540 -113642314 + AT_rich Low_complexity Low_complexity 1 35 0 25 51 0 0 chr2 137045567 137045606 -113642248 + AT_rich Low_complexity Low_complexity 1 39 0 25 31 0 0 chr2 137045809 137045841 -113642013 + AT_rich Low_complexity Low_complexity 1 32 0 303 303 50 17 chr2 137045864 137045983 -113641871 + L1MEc LINE L1 2769 2891 -3324 570 225 150 11 chr2 137046093 137046280 -113641574 + MER20 DNA MER1_type 4 216 -3 1755 170 58 23 chr2 137046420 137046850 -113641004 - LTR56 LTR ERV1 0 445 1 2403 170 99 11 chr2 137047032 137047578 -113640276 - LTR49 LTR ERV1 -1 594 1 883 269 4 8 chr2 137048636 137048878 -113638976 - MLT1D LTR MaLR 0 505 265 2075 113 7 0 chr2 137048878 137049169 -113638685 - AluY SINE Alu -16 295 3 34 55 0 0 chr2 137049549 137049604 -113638250 + AT_rich Low_complexity Low_complexity 1 55 0 340 253 27 20 chr2 137049761 137049911 -113637943 + (TA)n Simple_repeat Simple_repeat 2 152 0 26 0 0 0 chr2 137050026 137050052 -113637802 + AT_rich Low_complexity Low_complexity 1 26 0 1382 254 46 10 chr2 137050854 137051267 -113636587 - MER54A LTR ERVL 0 901 474 2136 127 74 15 chr2 137051307 137051645 -113636209 - THE1B LTR MaLR 0 364 7 1645 209 51 2 chr2 137051654 137052047 -113635807 - MER54A LTR ERVL -489 412 1 22 0 0 0 chr2 137053221 137053243 -113634611 + AT_rich Low_complexity Low_complexity 1 22 0 1429 221 0 11 chr2 137053243 137053524 -113634330 - AluJb SINE Alu -24 288 11 270 0 0 0 chr2 137053728 137053758 -113634096 + (T)n Simple_repeat Simple_repeat 1 30 0 296 308 69 8 chr2 137054769 137054899 -113632955 + MIR SINE MIR 3 140 -122 2404 73 0 10 chr2 137055434 137055736 -113632118 + AluY SINE Alu 1 299 -12 196 313 15 30 chr2 137056019 137056086 -113631768 + MIR SINE MIR 182 247 -15 344 270 40 43 chr2 137056296 137056501 -113631353 + MIR SINE MIR 8 262 0 2110 70 0 39 chr2 137058010 137058295 -113629559 - AluY SINE Alu 0 311 38 189 0 0 0 chr2 137058882 137058903 -113628951 + (TTGG)n Simple_repeat Simple_repeat 4 24 0 1148 258 74 47 chr2 137058934 137059379 -113628475 - MLT1C LTR MaLR -5 462 6 1906 202 13 2 chr2 137059790 137060186 -113627668 + L1PA16 LINE L1 5764 6163 -3 260 178 68 27 chr2 137060192 137060265 -113627589 + L1ME4a LINE L1 5968 6043 -78 201 147 0 0 chr2 137062485 137062519 -113625335 + (CA)n Simple_repeat Simple_repeat 1 34 0 189 189 19 75 chr2 137062637 137062690 -113625164 - L2 LINE L2 -96 3217 3168 4792 99 33 0 chr2 137062796 137063299 -113624555 - L1PA13 LINE L1 -2 6161 5625 2592 104 0 27 chr2 137063299 137063673 -113624181 + THE1B LTR MaLR 1 364 0 4792 99 33 0 chr2 137063673 137063893 -113623961 - L1PA13 LINE L1 -538 5625 5414 2456 194 13 15 chr2 137064272 137064957 -113622897 - L1M4 LINE L1 -405 6277 5594 647 237 31 18 chr2 137064978 137065202 -113622652 - L1M4 LINE L1 -2191 4453 4227 5091 187 16 20 chr2 137065238 137066812 -113621042 - L1PA16 LINE L1 -5 6864 5302 * 9777 117 17 29 chr2 137066806 137068271 -113619583 + THE1B-int LTR MaLR 133 1580 0 2595 97 5 24 chr2 137068271 137068642 -113619212 + THE1B LTR MaLR 1 364 0 301 170 0 0 chr2 137068653 137068700 -113619154 + L1PA15-16 LINE L1 1112 1158 -5691 * 6655 219 16 8 chr2 137068695 137070124 -113617730 - L1PA16 LINE L1 -5592 1257 1 645 224 94 0 chr2 137070119 137070289 -113617565 - L1M4 LINE L1 -2433 4211 4026 * 4569 253 66 35 chr2 137070344 137073199 -113614655 - L1M4 LINE L1 -3653 2991 15 325 325 26 0 chr2 137074251 137074365 -113613489 + L2 LINE L2 3192 3308 -5 284 354 0 24 chr2 137074567 137074694 -113613160 - MIR SINE MIR -110 152 29 388 296 145 61 chr2 137074826 137075303 -113612551 - MLT1F LTR MaLR -8 534 18 204 294 132 15 chr2 137075376 137075512 -113612342 + MIR SINE MIR 46 197 -65 881 306 88 0 chr2 137076302 137076622 -113611232 - L2 LINE L2 -1646 1668 1321 609 309 42 28 chr2 137076717 137077002 -113610852 + MLT1K LTR MaLR 300 588 0 382 311 50 37 chr2 137077064 137077225 -113610629 + MIR SINE MIR 1 163 -99 365 319 48 24 chr2 137077228 137077394 -113610460 - MIR SINE MIR -30 232 63 306 243 43 107 chr2 137077416 137077556 -113610298 - MER94 DNA DNA 0 134 4 1167 286 90 12 chr2 137077556 137077958 -113609896 - LTR16A LTR ERVL -1 449 17 2534 64 0 0 chr2 137078044 137078342 -113609512 - AluY SINE Alu -13 298 1 22 35 0 0 chr2 137078505 137078534 -113609320 + AT_rich Low_complexity Low_complexity 1 29 0 2580 177 55 6 chr2 137079150 137079642 -113608212 + MLT2B1 LTR ERVL 1 516 -4 24 0 0 0 chr2 137079812 137079836 -113608018 + AT_rich Low_complexity Low_complexity 1 24 0 864 95 87 5 chr2 137080828 137080951 -113606903 - LTR12 LTR ERV1 0 714 602 3931 146 44 31 chr2 137080951 137081630 -113606224 - LTR12 LTR ERV1 0 688 1 864 95 87 5 chr2 137081630 137081648 -113606206 - LTR12 LTR ERV1 -112 602 116 613 234 38 47 chr2 137081842 137082077 -113605777 - pTR5 LTR ERV1 -1463 975 743 2358 65 0 40 chr2 137082126 137082450 -113605404 + AluY SINE Alu 1 311 0 28 48 0 0 chr2 137083733 137083775 -113604079 + AT_rich Low_complexity Low_complexity 1 42 0 237 65 0 0 chr2 137084770 137084801 -113603053 + (T)n Simple_repeat Simple_repeat 1 31 0 278 228 20 129 chr2 137084840 137084941 -113602913 + MER77 LTR ERV1 1 90 -515 2540 186 98 35 chr2 137085754 137086419 -113601435 + MER39 LTR ERV1 1 707 0 354 327 63 19 chr2 137086653 137086812 -113601042 - L2 LINE L2 -329 2984 2819 511 228 0 7 chr2 137086949 137087137 -113600717 + MER58A DNA MER1_type 1 223 -1 1445 199 17 13 chr2 137087491 137087793 -113600061 - AluJb SINE Alu -9 303 1 33 43 0 0 chr2 137088431 137088478 -113599376 + AT_rich Low_complexity Low_complexity 1 47 0 189 0 0 0 chr2 137090676 137090697 -113597157 + (TG)n Simple_repeat Simple_repeat 2 22 0 23 0 0 0 chr2 137091152 137091175 -113596679 + AT_rich Low_complexity Low_complexity 1 23 0 1104 266 19 13 chr2 137091250 137091622 -113596232 + L1MB4 LINE L1 3360 3733 -2413 * 3013 243 66 11 chr2 137091621 137092542 -113595312 + L1MB4 LINE L1 4358 5388 -792 1949 129 0 0 chr2 137092542 137092821 -113595033 + AluSq SINE Alu 3 281 -32 3013 243 66 11 chr2 137092821 137093470 -113594384 + L1MB4 LINE L1 5388 6000 -180 616 196 71 24 chr2 137093482 137093650 -113594204 + L1M4 LINE L1 4690 4865 -1281 524 271 54 0 chr2 137093670 137093836 -113594018 + L1MB4 LINE L1 6006 6180 0 9766 198 42 27 chr2 137093948 137095992 -113591862 + L1MA4 LINE L1 2131 4803 -1497 2003 112 18 4 chr2 137095992 137096297 -113591557 + AluSg SINE Alu 1 309 0 9766 198 42 27 chr2 137096297 137097074 -113590780 + L1MA4 LINE L1 4803 5567 -733 645 201 13 19 chr2 137097109 137097263 -113590591 - L1M4 LINE L1 -6384 158 6 2676 188 4 16 chr2 137097404 137097920 -113589934 + L1MA4 LINE L1 5620 6129 -171 411 266 9 0 chr2 137097947 137098060 -113589794 + L1M4 LINE L1 2480 2593 -3553 5569 236 58 32 chr2 137098115 137100150 -113587704 + L1M4 LINE L1 2700 4786 -1360 192 97 0 0 chr2 137100150 137100181 -113587673 + (TA)n Simple_repeat Simple_repeat 2 32 0 227 348 39 61 chr2 137100484 137100665 -113587189 + L2 LINE L2 3096 3272 0 801 139 17 6 chr2 137100756 137100929 -113586925 + GA-rich Low_complexity Low_complexity 3 177 0 2393 163 20 2 chr2 137101036 137101434 -113586420 + MSTA-int LTR MaLR 1247 1651 0 2095 137 89 8 chr2 137101459 137101831 -113586023 + MSTA LTR MaLR 27 428 0 24 53 0 0 chr2 137101929 137101967 -113585887 + AT_rich Low_complexity Low_complexity 1 38 0 21 57 0 0 chr2 137102446 137102481 -113585373 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr2 137102776 137102818 -113585036 + AT_rich Low_complexity Low_complexity 1 42 0 2438 60 0 3 chr2 137103755 137104057 -113583797 + AluY SINE Alu 1 301 -10 24 77 0 0 chr2 137104076 137104128 -113583726 + AT_rich Low_complexity Low_complexity 1 52 0 4051 193 32 19 chr2 137104183 137105752 -113582102 - L1MB1 LINE L1 -45 6123 4545 2103 112 0 3 chr2 137106330 137106617 -113581237 - AluSq SINE Alu -27 286 1 24 0 0 0 chr2 137106703 137106727 -113581127 + AT_rich Low_complexity Low_complexity 1 24 0 282 143 0 0 chr2 137106739 137106788 -113581066 + (CA)n Simple_repeat Simple_repeat 1 49 0 489 271 47 65 chr2 137106788 137107002 -113580852 - MIR SINE MIR -17 245 36 779 225 81 18 chr2 137107114 137107336 -113580518 - MER46A DNA MER2_type 0 236 1 1966 151 0 22 chr2 137107577 137107895 -113579959 + AluSx SINE Alu 1 311 -1 2158 150 132 5 chr2 137109257 137109698 -113578156 - L1MA4 LINE L1 -3 6297 5801 * 2192 143 43 3 chr2 137109695 137109920 -113577934 + L1M1 LINE L1 5367 5581 -719 261 0 0 0 chr2 137109920 137109949 -113577905 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2134 117 0 0 chr2 137109952 137110235 -113577619 + AluSx SINE Alu 21 303 -9 2192 143 43 3 chr2 137110235 137110396 -113577458 + L1M1 LINE L1 5582 5773 -527 1116 219 61 17 chr2 137110460 137110757 -113577097 - L1MC3 LINE L1 -23 7762 7453 408 41 0 0 chr2 137110757 137110806 -113577048 + THE1A LTR MaLR 1 49 -306 10556 100 9 49 chr2 137110806 137112439 -113575415 + THE1A-int LTR MaLR 14 1580 0 2169 117 23 14 chr2 137112439 137112791 -113575063 + THE1A LTR MaLR 1 355 0 817 210 44 6 chr2 137112791 137112972 -113574882 - L1MC3 LINE L1 -328 7457 7270 588 206 66 0 chr2 137112977 137113113 -113574741 - L1MA9 LINE L1 -38 6274 6130 * 6584 222 76 48 chr2 137113109 137115529 -113572325 - L1MC3 LINE L1 -508 7277 4772 369 0 0 0 chr2 137115529 137115570 -113572284 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 6584 222 76 48 chr2 137115570 137115799 -113572055 - L1MC3 LINE L1 -3013 4772 4551 1488 270 32 13 chr2 137115819 137116375 -113571479 - L1MC3 LINE L1 -1767 4379 3813 1883 163 32 16 chr2 137116859 137117228 -113570626 + THE1C LTR MaLR 1 375 0 519 212 47 47 chr2 137117365 137117578 -113570276 + MER58 DNA MER1_type 1 2420 0 1123 149 31 0 chr2 137117832 137118026 -113569828 - L1PB1 LINE L1 -1 6150 5951 12592 197 15 5 chr2 137118028 137121484 -113566370 - L1PB1 LINE L1 -244 5907 2420 1390 74 0 0 chr2 137121502 137121678 -113566176 - AluY SINE Alu 0 311 136 614 125 19 19 chr2 137121678 137121782 -113566072 + LTR1B LTR ERV1 723 826 0 398 213 123 0 chr2 137121782 137121904 -113565950 + MER67B LTR ERV1 60 156 -358 2773 161 60 41 chr2 137121914 137122593 -113565261 - LTR1B LTR ERV1 -88 697 1 329 239 209 22 chr2 137122593 137122727 -113565127 - MER67B LTR ERV1 -502 159 1 1984 121 18 0 chr2 137123150 137123432 -113564422 - AluY SINE Alu -24 287 1 1974 154 0 0 chr2 137123787 137124099 -113563755 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 137126093 137126119 -113561735 + AT_rich Low_complexity Low_complexity 1 26 0 503 333 60 40 chr2 137126185 137126584 -113561270 - LTR33 LTR ERVL -114 407 1 2091 173 35 27 chr2 137126805 137127350 -113560504 + MLT2A2 LTR ERVL 1 551 -3 973 289 151 29 chr2 137127353 137128254 -113559600 - HAL1b LINE L1 -105 1243 233 2313 61 0 0 chr2 137128403 137128682 -113559172 + AluY SINE Alu 1 279 -32 201 39 0 0 chr2 137128685 137128711 -113559143 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 238 384 87 0 chr2 137128899 137129084 -113558770 + L3 LINE CR1 327 527 -1050 37 0 0 0 chr2 137129091 137129128 -113558726 + AT_rich Low_complexity Low_complexity 1 37 0 516 354 144 27 chr2 137129354 137130096 -113557758 + L3 LINE CR1 652 1480 -97 24 67 0 0 chr2 137130104 137130149 -113557705 + AT_rich Low_complexity Low_complexity 1 45 0 386 331 145 0 chr2 137130231 137130397 -113557457 + MIR SINE MIR 39 228 -34 326 127 0 36 chr2 137130855 137130910 -113556944 + MER39 LTR ERV1 655 707 0 250 169 0 77 chr2 137131091 137131156 -113556698 + CT-rich Low_complexity Low_complexity 1 60 0 306 308 149 23 chr2 137131209 137131423 -113556431 - HAL1 LINE L1 0 2507 2267 219 320 8 56 chr2 137131471 137131596 -113556258 + L2 LINE L2 3195 3313 0 843 225 50 156 chr2 137131648 137132456 -113555398 - HAL1 LINE L1 -754 1753 1032 429 261 123 15 chr2 137132442 137132710 -113555144 - HAL1 LINE L1 -1240 1267 971 * 2025 94 22 4 chr2 137133718 137134032 -113553822 + AluY SINE Alu 1 319 0 1171 305 44 35 chr2 137134080 137134562 -113553292 + MLT1E2 LTR MaLR 1 486 -140 309 186 29 0 chr2 137134561 137134631 -113553223 + MLT1D LTR MaLR 432 503 -2 * 2049 121 0 0 chr2 137134637 137135013 -113552841 + AluSq SINE Alu 3 378 0 393 22 0 0 chr2 137136509 137136555 -113551299 + (TG)n Simple_repeat Simple_repeat 1 46 0 31 68 0 0 chr2 137138019 137138078 -113549776 + AT_rich Low_complexity Low_complexity 1 59 0 222 37 0 0 chr2 137139143 137139170 -113548684 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1900 125 7 11 chr2 137139173 137139454 -113548400 - AluSx SINE Alu -32 280 1 758 124 0 0 chr2 137139476 137139611 -113548243 - AluSg/x SINE Alu 0 314 180 312 281 0 0 chr2 137139962 137140044 -113547810 - L1MEc LINE L1 -3552 3389 3308 23 0 0 0 chr2 137140045 137140068 -113547786 + AT_rich Low_complexity Low_complexity 1 23 0 2110 120 15 6 chr2 137140068 137140410 -113547444 - L1PB1 LINE L1 -3 6148 5804 3442 180 70 9 chr2 137140469 137140828 -113547026 - L1MB3 LINE L1 0 6183 5847 279 0 0 0 chr2 137140828 137140859 -113546995 + (TA)n Simple_repeat Simple_repeat 1 31 0 3442 180 70 9 chr2 137140859 137141237 -113546617 - L1MB3 LINE L1 -336 5847 5401 1748 231 34 30 chr2 137141239 137141589 -113546265 + L1M4 LINE L1 4803 5150 -996 2142 91 16 32 chr2 137141589 137141897 -113545957 - AluSc SINE Alu -1 308 6 2236 118 0 7 chr2 137141902 137142206 -113545648 - AluSx SINE Alu -10 302 1 1748 231 34 30 chr2 137142206 137142417 -113545437 + L1M4 LINE L1 5153 5372 -774 848 241 31 68 chr2 137142418 137142740 -113545114 - L1MEc LINE L1 -3649 3292 3031 2567 51 0 3 chr2 137142740 137143052 -113544802 - AluY SINE Alu 0 311 1 848 241 31 68 chr2 137143052 137143217 -113544637 - L1MEc LINE L1 -3910 3031 2861 1820 287 92 69 chr2 137143218 137144366 -113543488 - L1MEc LINE L1 -5231 1192 19 1376 81 6 0 chr2 137144767 137144939 -113542915 + AluY SINE Alu 2 174 -137 4650 142 14 25 chr2 137144939 137146070 -113541784 - L1PA14 LINE L1 -123 6038 4924 4738 69 15 3 chr2 137146077 137147094 -113540760 + MER11A LTR ERVK 1 1266 0 7116 192 8 40 chr2 137147095 137147717 -113540137 - L1PA14 LINE L1 -1225 4921 4281 1813 177 3 0 chr2 137147717 137148011 -113539843 - AluJb SINE Alu -16 296 2 7116 192 8 40 chr2 137148011 137148495 -113539359 - L1PA14 LINE L1 -1865 4281 3877 2045 137 3 3 chr2 137148495 137148802 -113539052 - AluSc SINE Alu -2 307 1 7116 192 8 40 chr2 137148802 137149257 -113538597 - L1PA14 LINE L1 -2269 3877 3409 488 304 54 63 chr2 137149279 137149614 -113538240 - MLT1H1 LTR MaLR -204 351 20 2516 73 0 0 chr2 137149614 137149916 -113537938 - AluY SINE Alu -9 302 1 292 168 81 14 chr2 137149933 137150006 -113537848 + L1ME LINE L1 5676 5758 -403 4152 169 27 41 chr2 137150132 137150943 -113536911 - L1MA8 LINE L1 -172 6119 5322 1971 132 11 0 chr2 137150943 137151264 -113536590 - AluSq SINE Alu 0 324 1 4152 169 27 41 chr2 137151264 137151471 -113536383 - L1MA8 LINE L1 -969 5322 5114 21 89 0 0 chr2 137152013 137152069 -113535785 + AT_rich Low_complexity Low_complexity 1 56 0 351 0 0 0 chr2 137152554 137152593 -113535261 + (CA)n Simple_repeat Simple_repeat 2 40 0 212 171 0 0 chr2 137153196 137153231 -113534623 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1806 197 51 38 chr2 137153352 137153743 -113534111 - MSTD LTR MaLR 0 396 1 318 223 26 129 chr2 137153834 137153991 -113533863 + MER5B DNA MER1_type 5 135 -43 249 276 76 38 chr2 137154354 137154459 -113533395 - MIR SINE MIR -106 156 48 2351 67 0 0 chr2 137155556 137155840 -113532014 + AluY SINE Alu 1 284 -27 27 0 0 0 chr2 137155840 137155867 -113531987 + AT_rich Low_complexity Low_complexity 1 27 0 204 315 0 0 chr2 137156356 137156410 -113531444 - MIR SINE MIR -6 256 203 2629 42 3 3 chr2 137156671 137156980 -113530874 - AluY SINE Alu -2 309 1 398 301 115 0 chr2 137157240 137157396 -113530458 + MIR SINE MIR 86 259 -3 25 83 0 0 chr2 137157651 137157711 -113530143 + AT_rich Low_complexity Low_complexity 1 60 0 37 0 0 0 chr2 137157881 137157918 -113529936 + AT_rich Low_complexity Low_complexity 1 37 0 5886 94 16 16 chr2 137158280 137159120 -113528734 - L1PA10 LINE L1 0 6168 5329 2200 109 0 0 chr2 137159120 137159414 -113528440 - AluSg1 SINE Alu -15 294 1 5886 94 16 16 chr2 137159414 137160262 -113527592 - L1PA10 LINE L1 -838 5330 4472 186 118 0 0 chr2 137160575 137160609 -113527245 + (GA)n Simple_repeat Simple_repeat 1 34 0 2532 122 6 0 chr2 137160778 137161140 -113526714 + THE1B LTR MaLR 1 364 0 1538 199 28 89 chr2 137161503 137161939 -113525915 + MLT2D LTR ERVL 1 409 -5 189 0 0 0 chr2 137163267 137163288 -113524566 + (CA)n Simple_repeat Simple_repeat 2 22 0 1635 126 4 0 chr2 137163841 137164071 -113523783 - AluSx SINE Alu -22 290 60 3196 72 5 2 chr2 137164071 137164504 -113523350 - L1PA8 LINE L1 -5 6167 5734 1754 134 7 34 chr2 137164894 137165186 -113522668 - AluSx SINE Alu -18 294 11 27 29 0 0 chr2 137165387 137165421 -113522433 + AT_rich Low_complexity Low_complexity 1 34 0 1843 66 0 4 chr2 137218612 137218853 -113469001 + L1P LINE L1 10 249 -5897 224 271 71 47 chr2 137219065 137219150 -113468704 + MIR SINE MIR 56 142 -120 33 0 0 0 chr2 137220586 137220619 -113467235 + AT_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr2 137221165 137221210 -113466644 + AT_rich Low_complexity Low_complexity 1 45 0 225 0 0 0 chr2 137221325 137221350 -113466504 + (CTAAT)n Simple_repeat Simple_repeat 2 26 0 348 77 0 0 chr2 137221911 137221963 -113465891 + (TG)n Simple_repeat Simple_repeat 1 52 0 218 205 12 0 chr2 137221967 137222050 -113465804 + GA-rich Low_complexity Low_complexity 2 85 0 849 300 139 26 chr2 137222054 137222628 -113465226 - L2 LINE L2 -836 2478 1840 484 91 52 0 chr2 137222840 137222917 -113464937 + L1PA7 LINE L1 6059 6139 -15 325 228 0 158 chr2 137222930 137223044 -113464810 - L1MC4 LINE L1 -1339 6703 6608 2033 148 13 0 chr2 137223060 137223364 -113464490 + AluSx SINE Alu 1 308 -4 261 304 44 29 chr2 137223364 137223568 -113464286 + L1ME LINE L1 5453 5659 -505 332 283 0 33 chr2 137223689 137223781 -113464073 + L1MC4 LINE L1 6615 6703 -1339 * 348 255 0 53 chr2 137223702 137223796 -113464058 - L1MC4 LINE L1 -1339 6703 6615 * 382 206 0 82 chr2 137223783 137223880 -113463974 + L1MC4 LINE L1 6614 6702 -1340 382 239 0 43 chr2 137223852 137223944 -113463910 - L1MC4 LINE L1 -1340 6702 6615 802 180 0 27 chr2 137224181 137224331 -113463523 - AluSg/x SINE Alu -1 309 164 1418 104 61 20 chr2 137224331 137227860 -113459994 + GSATII Satellite centromeric 1 3673 -32 11040 192 24 52 chr2 137229360 137229919 -113457935 - L1PBa LINE L1 -1112 5750 5177 1131 169 0 0 chr2 137229919 137230097 -113457757 - AluSp SINE Alu 0 313 136 11040 192 24 52 chr2 137230097 137230177 -113457677 - L1PBa LINE L1 -1685 5177 5096 225 0 0 0 chr2 137230177 137230202 -113457652 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 11040 192 24 52 chr2 137230202 137233433 -113454421 - L1PBa LINE L1 -1766 5096 1853 899 88 0 0 chr2 137233538 137233663 -113454191 + L1P LINE L1 399 523 -5623 192 209 149 15 chr2 137234622 137234689 -113453165 + MIR SINE MIR 36 111 -151 185 266 0 62 chr2 137235020 137235084 -113452770 + L2 LINE L2 3254 3313 0 184 261 54 72 chr2 137235219 137235330 -113452524 - MIR3 SINE MIR -3 205 97 2072 176 62 0 chr2 137235466 137235853 -113452001 + MSTA LTR MaLR 18 428 0 1039 93 19 0 chr2 137235853 137236015 -113451839 + MSTA-int LTR MaLR 1 165 -1486 347 221 0 26 chr2 137236010 137236087 -113451767 + MSTA-int LTR MaLR 289 363 -1288 * 8318 53 0 0 chr2 137236068 137237208 -113450646 - L1P LINE L1 -4176 1970 703 7874 18 3 0 chr2 137237204 137238232 -113449622 + L1PA2 LINE L1 5125 6155 0 2712 221 25 3 chr2 137238232 137238801 -113449053 + MSTA-int LTR MaLR 341 921 -730 2187 181 58 16 chr2 137238812 137239304 -113448550 + TAR1 Satellite telomeric 1 512 -41 2543 190 16 2 chr2 137239463 137239973 -113447881 - L1PBa LINE L1 -5015 1848 1332 446 169 346 0 chr2 137239990 137240120 -113447734 - L1PBa LINE L1 -5700 1163 989 931 262 93 42 chr2 137241697 137242071 -113445783 + L1 LINE L1 3396 3812 -2334 884 230 0 0 chr2 137242071 137242236 -113445618 + FRAM SINE Alu 1 165 -1 931 262 93 42 chr2 137242236 137242452 -113445402 + L1 LINE L1 3812 4016 -2130 1574 263 2 9 chr2 137244000 137244441 -113443413 + L1 LINE L1 4782 5219 -927 540 92 5 87 chr2 137244488 137244684 -113443170 + (CCCTAA)n Simple_repeat Simple_repeat 1 180 0 2482 152 10 32 chr2 137244836 137245318 -113442536 - TAR1 Satellite telomeric -308 471 1 22 0 0 0 chr2 137245670 137245692 -113442162 + AT_rich Low_complexity Low_complexity 1 22 0 198 268 62 21 chr2 137245717 137245814 -113442040 - MIR SINE MIR -54 208 108 22 0 0 0 chr2 137248179 137248201 -113439653 + GC_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 137249525 137249555 -113438299 + GC_rich Low_complexity Low_complexity 1 30 0 2014 168 30 16 chr2 137250370 137250740 -113437114 - THE1C LTR MaLR 0 375 1 317 336 41 14 chr2 137250745 137250891 -113436963 - MLT1K LTR MaLR -425 163 14 2006 162 0 10 chr2 137250946 137251254 -113436600 + AluJb SINE Alu 1 305 -7 201 254 0 0 chr2 137251360 137251419 -113436435 + (TA)n Simple_repeat Simple_repeat 1 59 0 345 348 59 29 chr2 137252007 137252211 -113435643 - L3 LINE CR1 -9 1568 1359 202 183 197 0 chr2 137252729 137252795 -113435059 - MIR SINE MIR -63 145 80 2404 86 3 0 chr2 137253208 137253509 -113434345 - AluY SINE Alu -9 302 1 2993 126 45 10 chr2 137253632 137253906 -113433948 - Tigger3(Golem) DNA MER2_type 0 3028 2765 2009 121 59 0 chr2 137253906 137254196 -113433658 + AluSx SINE Alu 1 307 -5 2993 126 45 10 chr2 137254196 137254437 -113433417 - Tigger3(Golem) DNA MER2_type -263 2765 2495 1174 128 0 21 chr2 137256471 137256659 -113431195 + THE1C LTR MaLR 1 184 -191 937 89 0 0 chr2 137256660 137256783 -113431071 + L1MA3 LINE L1 6183 6305 0 23 0 0 0 chr2 137256783 137256806 -113431048 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 137257435 137257456 -113430398 + AT_rich Low_complexity Low_complexity 1 21 0 192 377 142 0 chr2 137258442 137258548 -113429306 + MIR SINE MIR 17 137 -125 25 0 0 0 chr2 137258638 137258663 -113429191 + AT_rich Low_complexity Low_complexity 1 25 0 29 0 0 0 chr2 137258722 137258751 -113429103 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 137258775 137258804 -113429050 + AT_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chr2 137259533 137259553 -113428301 + (TG)n Simple_repeat Simple_repeat 1 20 0 333 0 0 0 chr2 137261506 137261543 -113426311 + (TG)n Simple_repeat Simple_repeat 2 38 0 25 0 0 0 chr2 137262500 137262525 -113425329 + AT_rich Low_complexity Low_complexity 1 25 0 2152 151 30 30 chr2 137263591 137263955 -113423899 + THE1B LTR MaLR 1 364 0 8797 103 123 20 chr2 137263955 137264234 -113423620 + THE1B-int LTR MaLR 1 250 -1330 2305 75 38 0 chr2 137264234 137264526 -113423328 - AluY SINE Alu -8 303 1 8797 103 123 20 chr2 137264526 137265672 -113422182 + THE1B-int LTR MaLR 250 1574 -6 2106 155 28 25 chr2 137265681 137266042 -113421812 + THE1B LTR MaLR 1 362 -2 321 244 23 0 chr2 137266042 137266128 -113421726 + L1MC4a LINE L1 4226 4313 -1833 1609 240 65 19 chr2 137266161 137266681 -113421173 + L1MC4a LINE L1 4540 5083 -1063 719 327 74 61 chr2 137267397 137267996 -113419858 - L1ME4a LINE L1 -266 5855 5266 449 224 134 101 chr2 137268146 137268256 -113419598 - MER5A DNA MER1_type -1 188 68 2267 82 31 10 chr2 137268256 137268550 -113419304 - AluY SINE Alu -2 309 10 449 224 134 101 chr2 137268550 137268618 -113419236 - MER5A DNA MER1_type -121 68 4 22 35 0 0 chr2 137268730 137268759 -113419095 + AT_rich Low_complexity Low_complexity 1 29 0 457 268 117 88 chr2 137268795 137269138 -113418716 - L1ME4a LINE L1 -2040 4106 3754 1897 124 0 0 chr2 137269573 137269864 -113417990 + L1PA13 LINE L1 5873 6163 0 1055 305 39 25 chr2 137269952 137270440 -113417414 + L1MC4a LINE L1 5396 5890 -1918 22 0 0 0 chr2 137272132 137272154 -113415700 + AT_rich Low_complexity Low_complexity 1 22 0 766 269 12 0 chr2 137272745 137272916 -113414938 - MER45A DNA AcHobo -4 174 2 879 257 44 144 chr2 137273084 137273811 -113414043 - L1MD2 LINE L1 -447 5912 5259 228 35 0 0 chr2 137273855 137273884 -113413970 + (TTAA)n Simple_repeat Simple_repeat 2 30 0 1460 84 0 11 chr2 137273884 137274075 -113413779 - AluY SINE Alu -13 298 110 4137 178 46 39 chr2 137274083 137275433 -113412421 - L1MA6 LINE L1 -27 6273 4916 262 102 0 0 chr2 137275564 137275613 -113412241 - Tigger3(Golem) DNA MER2_type -237 2792 2744 1464 110 0 0 chr2 137275616 137275807 -113412047 + AluSx SINE Alu 1 191 -121 5275 124 42 1 chr2 137275878 137276775 -113411079 - L1PA16 LINE L1 -9 6157 5225 1069 244 54 58 chr2 137276890 137277354 -113410500 + MLT1C LTR MaLR 6 467 0 21 0 0 0 chr2 137277389 137277410 -113410444 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 137277452 137277479 -113410375 + AT_rich Low_complexity Low_complexity 1 27 0 470 323 35 4 chr2 137277533 137277765 -113410089 - L1MC4a LINE L1 -1945 5863 5625 307 290 91 24 chr2 137277829 137278137 -113409717 - MLT1I LTR MaLR -3 406 4 302 330 10 0 chr2 137278456 137278556 -113409298 + MLT1I LTR MaLR 168 268 -141 390 297 35 7 chr2 137278786 137278931 -113408923 + MIR SINE MIR 58 206 -56 204 273 18 0 chr2 137279324 137279379 -113408475 + GA-rich Low_complexity Low_complexity 3 58 0 22 0 0 0 chr2 137281416 137281438 -113406416 + GC_rich Low_complexity Low_complexity 1 22 0 192 77 0 0 chr2 137284304 137284330 -113403524 + (CAAGG)n Simple_repeat Simple_repeat 1 26 0 1672 160 39 33 chr2 137287922 137288259 -113399595 + THE1C LTR MaLR 5 343 -32 273 228 0 38 chr2 137288285 137288364 -113399490 + (TA)n Simple_repeat Simple_repeat 1 76 0 4653 201 37 8 chr2 137288364 137289994 -113397860 - L1P5 LINE L1 -363 5791 4109 3164 135 34 12 chr2 137290211 137290707 -113397147 + MER1A DNA MER1_type 18 524 -5 2454 54 0 0 chr2 137290977 137291257 -113396597 + AluY SINE Alu 1 280 -31 2468 67 0 13 chr2 137293593 137293893 -113393961 - AluY SINE Alu -15 296 1 325 278 58 78 chr2 137293894 137293987 -113393867 + L1ME4a LINE L1 5866 5954 -167 213 39 0 0 chr2 137293987 137294013 -113393841 + (TG)n Simple_repeat Simple_repeat 1 26 0 325 278 58 78 chr2 137294013 137294110 -113393744 + L1ME4a LINE L1 5954 6052 -69 516 167 0 0 chr2 137294191 137294275 -113393579 - AluSg/x SINE Alu -65 247 164 771 168 26 16 chr2 137294277 137294468 -113393386 + L1M1 LINE L1 3306 3498 -4067 10972 197 50 46 chr2 137294496 137295203 -113392651 + L1M1 LINE L1 3460 4163 -3402 1904 88 81 0 chr2 137295203 137295489 -113392365 + AluY SINE Alu 1 307 0 10972 197 50 46 chr2 137295489 137298050 -113389804 + L1M1 LINE L1 4163 6741 -824 4993 43 0 2 chr2 137299548 137300168 -113387686 - L1P LINE L1 -3012 3134 2516 343 283 50 33 chr2 137301423 137301603 -113386251 - HERV16 LTR ERVL -2033 2963 2781 21 0 0 0 chr2 137302160 137302181 -113385673 + AT_rich Low_complexity Low_complexity 1 21 0 190 337 40 40 chr2 137302439 137302540 -113385314 + MIR SINE MIR 44 144 -64 365 326 9 32 chr2 137302880 137303101 -113384753 + L1MCa LINE L1 1708 2017 -4503 265 228 146 59 chr2 137303128 137303347 -113384507 + L1MCa LINE L1 2112 2349 -4258 207 0 0 0 chr2 137303363 137303386 -113384468 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 703 307 52 16 chr2 137303426 137303810 -113384044 + L1MCa LINE L1 2461 2858 -3568 1783 120 77 47 chr2 137304030 137304330 -113383524 + AluSp SINE Alu 3 311 -2 1268 173 4 59 chr2 137309077 137309348 -113378506 - AluJb SINE Alu -52 260 5 362 191 67 43 chr2 137309350 137309476 -113378378 - MLT1B LTR MaLR -219 171 48 626 258 60 0 chr2 137310003 137310170 -113377684 - MIR SINE MIR -66 196 20 214 128 85 0 chr2 137310265 137310312 -113377542 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 2208 124 108 141 chr2 137311433 137312023 -113375831 + LTR4 LTR ERV1 26 596 0 1629 186 9 28 chr2 137312066 137312384 -113375470 - AluJo SINE Alu 0 312 1 337 236 24 57 chr2 137312426 137312549 -113375305 - L1ME4a LINE L1 -3 6118 6000 195 125 0 0 chr2 137312584 137312624 -113375230 + (TG)n Simple_repeat Simple_repeat 1 40 0 244 311 27 47 chr2 137312645 137312793 -113375061 - MIR SINE MIR -1 261 117 330 296 94 49 chr2 137312885 137312983 -113374871 - L1ME4a LINE L1 -249 5872 5780 1972 125 17 3 chr2 137312983 137313270 -113374584 + AluSq SINE Alu 2 292 -21 330 296 94 49 chr2 137313270 137313478 -113374376 - L1ME4a LINE L1 -341 5780 5552 898 175 0 92 chr2 137314398 137314604 -113373250 + MER3 DNA MER1_type 23 209 0 1684 187 3 32 chr2 137315358 137315674 -113372180 - AluJb SINE Alu 0 312 6 1886 154 103 23 chr2 137316002 137316398 -113371456 - MSTA LTR MaLR 0 428 1 1430 230 4 0 chr2 137317131 137317409 -113370445 + AluJb SINE Alu 1 279 -33 262 152 242 0 chr2 137317808 137317874 -113369980 - MIR SINE MIR -97 165 84 520 218 48 36 chr2 137318031 137318196 -113369658 - MLT1L LTR MaLR -27 588 422 184 158 26 0 chr2 137320189 137320227 -113367627 - MIR SINE MIR -122 140 102 360 298 130 8 chr2 137320259 137320390 -113367464 + MIR SINE MIR 40 186 -76 4712 204 27 15 chr2 137324031 137325665 -113362189 + L1MA7 LINE L1 4131 5781 -510 2452 213 68 28 chr2 137325659 137326302 -113361552 + L1MB8 LINE L1 5508 6176 -2 * 1944 197 68 28 chr2 137326306 137326809 -113361045 + L1MA7 LINE L1 5769 6291 0 23 33 0 0 chr2 137327224 137327254 -113360600 + AT_rich Low_complexity Low_complexity 1 30 0 299 26 0 0 chr2 137327254 137327293 -113360561 - HY3 scRNA scRNA -1 100 62 240 340 19 0 chr2 137328372 137328475 -113359379 - MLT1K LTR MaLR -348 240 136 1199 257 64 50 chr2 137328476 137329072 -113358782 + L1ME1 LINE L1 5560 6163 -3 1989 130 7 27 chr2 137329369 137329669 -113358185 - AluSq SINE Alu -19 294 1 6620 143 20 20 chr2 137329822 137331424 -113356430 + L1MA1 LINE L1 4687 6293 -9 3055 52 26 4 chr2 137332913 137333357 -113354497 - L1P2 LINE L1 -716 5438 4989 324 0 0 0 chr2 137333361 137333397 -113354457 + (TAA)n Simple_repeat Simple_repeat 1 36 0 658 237 72 79 chr2 137334278 137334969 -113352885 + HSREP522 Satellite telomeric 1 686 -100 306 0 0 0 chr2 137336041 137336075 -113351779 + (TG)n Simple_repeat Simple_repeat 2 35 0 2325 90 0 13 chr2 137336075 137336374 -113351480 - AluY SINE Alu -16 295 1 308 292 17 0 chr2 137336479 137336599 -113351255 + CT-rich Low_complexity Low_complexity 2 123 0 227 105 0 193 chr2 137336750 137336807 -113351047 + MER85 DNA T2_type 90 135 -4 * 961 94 0 0 chr2 137336776 137336904 -113350950 - MER85 DNA T2_type -11 128 1 2193 123 7 0 chr2 137337087 137337397 -113350457 - AluSp SINE Alu -1 312 1 2185 131 0 0 chr2 137337497 137337803 -113350051 - AluSq SINE Alu -7 306 1 1412 190 25 7 chr2 137338582 137338856 -113348998 + MER41-int LTR ERV1 2076 2354 -3592 874 159 48 24 chr2 137338855 137339062 -113348792 + MER41-int LTR ERV1 1839 2050 -6070 * 2238 147 56 27 chr2 137339071 137339547 -113348307 + MER41-int LTR ERV1 2791 3229 -2717 226 212 283 18 chr2 137339547 137339660 -113348194 + LTR33A LTR ERVL 370 512 -11 1815 199 43 30 chr2 137340424 137341006 -113346848 + L1MB8 LINE L1 4114 4731 -1415 306 196 54 0 chr2 137341007 137341099 -113346755 + L1P LINE L1 4858 4954 -1192 1773 206 59 58 chr2 137341101 137341692 -113346162 + L1MB8 LINE L1 5587 6178 0 4790 157 32 33 chr2 137341732 137342463 -113345391 - L1PB1 LINE L1 -3 6148 5418 1851 114 59 0 chr2 137342463 137342735 -113345119 - AluSc SINE Alu -21 288 1 4790 157 32 33 chr2 137342735 137343517 -113344337 - L1PB1 LINE L1 -733 5418 4639 1348 183 39 28 chr2 137344021 137344306 -113343548 - AluJo SINE Alu -24 288 1 275 312 73 15 chr2 137344442 137344647 -113343207 - L1 LINE L1 -784 5362 5146 1678 169 0 18 chr2 137344666 137344939 -113342915 + AluJb SINE Alu 1 268 -44 309 203 17 0 chr2 137344984 137345043 -113342811 - AluJ/FRAM SINE Alu -13 289 230 309 206 14 0 chr2 137345045 137345118 -113342736 - L1 LINE L1 -1424 4722 4649 2017 252 90 28 chr2 137345204 137346101 -113341753 - L1MA6 LINE L1 -49 6251 5299 1352 266 56 14 chr2 137346377 137347325 -113340529 - L1PA16 LINE L1 -246 5920 4884 1421 281 42 47 chr2 137347456 137348423 -113339431 - L1MA6 LINE L1 -41 6259 5297 708 150 222 10 chr2 137348661 137348868 -113338986 + MER4A-int LTR ERV1 359 609 -5989 * 998 85 91 135 chr2 137348846 137349191 -113338663 + MER4A-int LTR ERV1 503 749 -4266 3659 109 65 22 chr2 137349217 137349424 -113338430 + MER4A-int LTR ERV1 1804 2001 -4597 2602 182 63 72 chr2 137349424 137350121 -113337733 - LTR8 LTR ERV1 0 691 1 3659 109 65 22 chr2 137350121 137350601 -113337253 + MER4A-int LTR ERV1 2001 2521 -4077 961 192 69 5 chr2 137350602 137350805 -113337049 - LTR8 LTR ERV1 -475 216 1 2204 119 110 39 chr2 137350805 137351350 -113336504 + MER4A-int LTR ERV1 2737 3320 -3278 10116 116 68 28 chr2 137351353 137351903 -113335951 + MER4A-int LTR ERV1 3924 4450 -2148 4001 9 0 0 chr2 137351903 137352352 -113335502 - L1PA2 LINE L1 -5 6150 5702 10116 116 68 28 chr2 137352352 137354307 -113333547 + MER4A-int LTR ERV1 4450 6597 -1 472 124 90 0 chr2 137354309 137354398 -113333456 + MER4A LTR ERV1 1 97 -567 1368 152 9 78 chr2 137354399 137354743 -113333111 + MER4A LTR ERV1 261 641 -23 384 299 50 35 chr2 137354748 137354949 -113332905 - L1MA6 LINE L1 -1310 4836 4633 1463 265 67 13 chr2 137355073 137355704 -113332150 - L1MA6 LINE L1 -129 6171 5507 409 297 20 45 chr2 137355818 137356020 -113331834 - L1MA6 LINE L1 -789 5357 5161 1747 264 33 47 chr2 137356576 137357368 -113330486 - L1PA16 LINE L1 -14 6152 5372 390 170 142 0 chr2 137358807 137358913 -113328941 - L1PA16 LINE L1 -1 6165 6045 287 320 178 9 chr2 137359084 137359309 -113328545 + LTR33A LTR ERVL 259 521 -2 448 112 34 56 chr2 137359740 137359829 -113328025 - AluJ/FLAM SINE Alu -225 87 1 408 221 23 64 chr2 137359832 137360004 -113327850 + L1MB8 LINE L1 4229 4393 -1753 4318 208 49 26 chr2 137360345 137360398 -113327456 + L1M2 LINE L1 4133 4183 -2108 1904 117 0 8 chr2 137360398 137360655 -113327199 - AluSg SINE Alu -55 255 1 4318 208 49 26 chr2 137360655 137361925 -113325929 + L1M2 LINE L1 4183 5495 -796 2313 99 0 10 chr2 137361925 137362238 -113325616 + AluSx SINE Alu 1 310 -2 4318 208 49 26 chr2 137362238 137362531 -113325323 + L1M2 LINE L1 5495 5780 -511 2111 207 80 31 chr2 137362526 137363165 -113324689 + L1MB8 LINE L1 5508 6177 -1 * 6081 171 28 22 chr2 137363219 137365540 -113322314 - L1PB1 LINE L1 0 6151 3827 1314 154 35 52 chr2 137366033 137366319 -113321535 - AluJb SINE Alu -6 306 26 2148 50 0 3 chr2 137366419 137366717 -113321137 + L1P LINE L1 3205 3501 -2645 568 213 29 102 chr2 137367814 137367973 -113319881 - L1M1 LINE L1 -559 5607 5501 1995 132 13 0 chr2 137367973 137368276 -113319578 - AluSx SINE Alu -5 307 1 568 213 29 102 chr2 137368276 137368441 -113319413 - L1M1 LINE L1 -665 5501 5326 390 275 51 83 chr2 137368461 137368737 -113319117 - L1M1 LINE L1 -840 5306 5040 473 220 138 47 chr2 137368856 137369197 -113318657 - L1M1 LINE L1 -1157 4989 4618 1506 251 61 23 chr2 137369205 137370257 -113317597 - L1MA6 LINE L1 -16 6284 5104 638 280 72 15 chr2 137370385 137370794 -113317060 - L1 LINE L1 -1092 5054 4624 2350 261 28 26 chr2 137370806 137371699 -113316155 - L1MA6 LINE L1 -12 6288 5394 1413 250 58 23 chr2 137371700 137372623 -113315231 - L1P4 LINE L1 -565 5601 4643 2217 259 37 37 chr2 137372658 137373393 -113314461 - L1MA6 LINE L1 -16 6284 5552 2489 66 3 0 chr2 137373393 137373694 -113314160 - AluY SINE Alu -9 302 1 2217 259 37 37 chr2 137373694 137374025 -113313829 - L1MA6 LINE L1 -748 5552 5222 1854 84 0 0 chr2 137374703 137374966 -113312888 - L1PA8A LINE L1 -179 5952 5690 14923 22 0 1 chr2 137378261 137380796 -113307058 + L1PA3 LINE L1 3634 6175 0 4404 99 42 10 chr2 137381072 137381779 -113306075 - L1MA1 LINE L1 0 6302 5573 25 0 0 0 chr2 137383823 137383848 -113304006 + AT_rich Low_complexity Low_complexity 1 25 0 252 304 57 16 chr2 137384122 137384316 -113303538 - L1M4 LINE L1 -751 5395 5194 2102 134 0 0 chr2 137384757 137385055 -113302799 - AluSg SINE Alu -12 298 1 283 238 49 0 chr2 137385190 137385312 -113302542 - L1M4 LINE L1 -3201 2945 2818 4383 170 12 8 chr2 137385312 137385713 -113302141 - L1PA15 LINE L1 0 6165 5767 1892 170 0 0 chr2 137385713 137386007 -113301847 - AluSx SINE Alu -16 296 3 4383 170 12 8 chr2 137386007 137387060 -113300794 - L1PA15 LINE L1 -398 5767 4734 275 167 0 0 chr2 137387060 137387114 -113300740 - MER4A LTR ERV1 -2 662 609 7260 39 7 0 chr2 137387116 137388330 -113299524 + L1PA5 LINE L1 4929 6147 -7 189 0 0 0 chr2 137388330 137388351 -113299503 + (TA)n Simple_repeat Simple_repeat 2 22 0 2042 201 50 0 chr2 137388373 137388831 -113299023 + L1 LINE L1 3742 4222 -1924 645 127 0 9 chr2 137388949 137389059 -113298795 - MER46A DNA MER2_type -3 233 125 262 365 181 32 chr2 137389769 137390094 -113297760 + L2 LINE L2 189 556 -2758 1616 122 0 4 chr2 137390323 137390552 -113297302 - MER46A DNA MER2_type -3 233 6 301 260 21 10 chr2 137391051 137391147 -113296707 - MLT1J LTR MaLR 0 511 415 2010 126 7 0 chr2 137391961 137392247 -113295607 - AluSx SINE Alu -23 289 2 677 93 9 0 chr2 137393239 137393346 -113294508 + (TAGA)n Simple_repeat Simple_repeat 3 110 0 384 322 99 3 chr2 137393821 137393985 -113293869 - MIR SINE MIR -76 132 10 1680 166 11 3 chr2 137394049 137394333 -113293521 - AluSx SINE Alu 0 312 27 233 318 59 41 chr2 137394333 137394492 -113293362 - L2 LINE L2 -218 3054 2890 520 244 93 86 chr2 137394504 137394764 -113293090 + MIR SINE MIR 21 262 0 21 0 0 0 chr2 137394860 137394881 -113292973 + AT_rich Low_complexity Low_complexity 1 21 0 23 86 0 0 chr2 137397281 137397339 -113290515 + AT_rich Low_complexity Low_complexity 1 58 0 2187 77 42 0 chr2 137398639 137398926 -113288928 - AluSx SINE Alu -13 299 1 195 390 0 0 chr2 137399183 137399242 -113288612 - MIR SINE MIR -113 149 91 493 286 33 50 chr2 137399664 137399846 -113288008 + L2 LINE L2 3134 3312 -1 1122 48 0 7 chr2 137399872 137400018 -113287836 + AluY SINE Alu 151 295 -16 227 301 71 18 chr2 137400324 137400437 -113287417 - HAL1b LINE L1 0 1348 1230 21 0 0 0 chr2 137400583 137400604 -113287250 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 137401620 137401641 -113286213 + AT_rich Low_complexity Low_complexity 1 21 0 14779 159 49 14 chr2 137401641 137405550 -113282304 - L1 LINE L1 -2464 5101 1057 326 345 21 14 chr2 137405589 137405731 -113282123 - L3 LINE CR1 -454 1123 981 237 325 136 18 chr2 137405996 137406165 -113281689 - L3 LINE CR1 -1184 393 205 3370 199 24 76 chr2 137406206 137407229 -113280625 + LTR5 LTR ERVK 1 969 0 23 0 0 0 chr2 137407284 137407307 -113280547 + AT_rich Low_complexity Low_complexity 1 23 0 363 279 113 97 chr2 137409050 137409369 -113278485 - L1M2 LINE L1 -5940 909 586 23 0 0 0 chr2 137409851 137409874 -113277980 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 137410263 137410291 -113277563 + AT_rich Low_complexity Low_complexity 1 28 0 228 238 0 0 chr2 137410904 137410946 -113276908 + (TG)n Simple_repeat Simple_repeat 2 43 0 338 222 81 20 chr2 137412059 137412158 -113275696 - MIR SINE MIR 0 262 158 * 469 249 203 20 chr2 137412145 137412342 -113275512 + MIR SINE MIR 30 262 0 417 285 60 60 chr2 137412382 137412666 -113275188 + MARNA DNA Mariner 33 316 -270 220 328 66 0 chr2 137413465 137413526 -113274328 - L2 LINE L2 -3 3310 3246 198 353 174 16 chr2 137415711 137416074 -113271780 + L2 LINE L2 2403 2822 -492 243 0 0 0 chr2 137416079 137416106 -113271748 + (T)n Simple_repeat Simple_repeat 1 27 0 240 257 20 79 chr2 137416398 137416499 -113271355 + L2 LINE L2 3177 3271 -1 469 304 35 6 chr2 137416600 137416771 -113271083 - MIR SINE MIR -13 249 74 2320 103 0 0 chr2 137417427 137417774 -113270080 - AluSx SINE Alu 0 347 1 21 36 0 0 chr2 137418228 137418256 -113269598 + AT_rich Low_complexity Low_complexity 1 28 0 204 315 153 36 chr2 137418314 137418536 -113269318 + L2 LINE L2 3019 3266 -47 23 0 0 0 chr2 137418818 137418841 -113269013 + AT_rich Low_complexity Low_complexity 1 23 0 1092 268 161 23 chr2 137419272 137419846 -113268008 - L2 LINE L2 -126 3187 2536 397 209 47 132 chr2 137420160 137420395 -113267459 + MER58C DNA MER1_type 1 215 0 21 57 0 0 chr2 137421242 137421277 -113266577 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 137421405 137421426 -113266428 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 137421447 137421475 -113266379 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 137421989 137422024 -113265830 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr2 137422122 137422152 -113265702 + AT_rich Low_complexity Low_complexity 1 30 0 339 25 0 0 chr2 137422594 137422634 -113265220 + (CA)n Simple_repeat Simple_repeat 1 40 0 345 24 0 0 chr2 137422639 137422681 -113265173 + (GA)n Simple_repeat Simple_repeat 2 43 0 306 151 0 0 chr2 137423554 137423607 -113264247 + L1MA9 LINE L1 6260 6312 0 238 241 19 0 chr2 137423730 137423784 -113264070 - LTR16C LTR ERVL -266 225 171 255 125 0 0 chr2 137423854 137423894 -113263960 + (A)n Simple_repeat Simple_repeat 1 40 0 27 49 0 0 chr2 137425032 137425073 -113262781 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 137425834 137425855 -113261999 + AT_rich Low_complexity Low_complexity 1 21 0 507 305 25 20 chr2 137426063 137426263 -113261591 + L1ME LINE L1 138 338 -5867 950 277 115 44 chr2 137426304 137427098 -113260756 + L1ME LINE L1 776 1625 -4771 470 221 91 72 chr2 137427500 137427708 -113260146 - L2 LINE L2 0 3313 3102 1985 275 77 50 chr2 137427716 137428667 -113259187 - L2 LINE L2 -315 2998 2023 1962 170 20 33 chr2 137428892 137429286 -113258568 + MLT1B LTR MaLR 2 390 0 486 313 61 51 chr2 137429392 137429980 -113257874 - HAL1b LINE L1 -689 659 66 21 36 0 0 chr2 137429988 137430016 -113257838 + AT_rich Low_complexity Low_complexity 1 28 0 685 237 104 0 chr2 137430049 137430260 -113257594 - L1MC4 LINE L1 -141 7901 7669 382 234 50 14 chr2 137430724 137430865 -113256989 - L1MEc LINE L1 -2111 4104 3959 3260 244 78 29 chr2 137430875 137431408 -113256446 - L1MEc LINE L1 -2895 3320 2815 1671 181 14 7 chr2 137431408 137431695 -113256159 - AluJo SINE Alu -23 289 1 3260 244 78 29 chr2 137431695 137432725 -113255129 - L1MEc LINE L1 -3400 2815 1734 754 229 6 22 chr2 137432868 137433047 -113254807 - L1MB8 LINE L1 -5 6173 5998 1668 157 10 27 chr2 137433162 137433462 -113254392 - AluJo SINE Alu -11 301 7 819 247 136 8 chr2 137434152 137434403 -113253451 + MER102b DNA MER1_type 54 336 -5 219 324 24 15 chr2 137434403 137434510 -113253344 - MIR SINE MIR -48 160 53 1615 184 164 11 chr2 137440800 137441165 -113246689 - MSTA LTR MaLR -7 421 1 1693 122 3 84 chr2 137445660 137445981 -113241873 + AluSg SINE Alu 1 295 -15 842 241 46 59 chr2 137447283 137447607 -113240247 - MER89-int LTR ERV1 -5142 1659 1340 1581 221 24 9 chr2 137447608 137447943 -113239911 - MLT1A1 LTR MaLR -25 340 1 1036 236 30 48 chr2 137447943 137448277 -113239577 - MER89-int LTR ERV1 -5444 1357 1030 1753 126 8 0 chr2 137448452 137448707 -113239147 + AluSx SINE Alu 41 297 -15 433 239 35 9 chr2 137449288 137449401 -113238453 + LTR25 LTR ERV1 248 363 -431 237 245 20 92 chr2 137449398 137449496 -113238358 + MER61E LTR ERV1 99 189 -380 * 1334 126 56 5 chr2 137449548 137449762 -113238092 + MER61E LTR ERV1 341 565 -4 210 319 14 0 chr2 137450279 137450348 -113237506 - L2 LINE L2 -2 3311 3242 1980 110 4 0 chr2 137450402 137450683 -113237171 + AluSq SINE Alu 1 282 -31 341 229 0 86 chr2 137450699 137450804 -113237050 + L1MC4 LINE L1 6608 6703 -1339 * 374 230 46 11 chr2 137450760 137450847 -113237007 - L1MC4 LINE L1 -1339 6703 6614 * 403 247 0 41 chr2 137450823 137450920 -113236934 + L1MC4 LINE L1 6610 6702 -1340 389 276 23 0 chr2 137450892 137450979 -113236875 - L1MC4 LINE L1 -1340 6702 6614 * 328 311 22 0 chr2 137450929 137451019 -113236835 + L1MC4 LINE L1 6614 6705 -1337 * 828 107 0 0 chr2 137451019 137451131 -113236723 - AluSg SINE Alu -176 134 23 344 162 15 15 chr2 137451131 137451199 -113236655 + MSTA LTR MaLR 361 428 0 673 209 14 10 chr2 137451823 137452007 -113235847 + MER4E LTR ERV1 1 395 -388 * 1590 226 11 17 chr2 137452005 137452364 -113235490 + MER4D LTR ERV1 547 903 0 29 0 0 0 chr2 137452603 137452632 -113235222 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 137452779 137452807 -113235047 + AT_rich Low_complexity Low_complexity 1 28 0 1489 168 35 14 chr2 137453202 137453488 -113234366 + AluJo SINE Alu 1 292 -20 2209 145 58 18 chr2 137454386 137454780 -113233074 + MSTA LTR MaLR 19 428 0 4560 263 137 35 chr2 137454782 137456214 -113231640 + MSTA-int LTR MaLR 3 1580 0 2261 161 41 14 chr2 137456214 137456630 -113231224 + MSTA LTR MaLR 1 427 -1 2167 194 19 26 chr2 137456875 137457339 -113230515 - MER65C LTR ERV1 0 461 1 352 174 9 104 chr2 137457339 137457454 -113230400 - MER65C-int LTR ERV1 0 4871 4768 602 268 42 5 chr2 137457509 137457722 -113230132 - MER65-int LTR ERV1 -2776 2095 1875 3960 192 7 36 chr2 137457725 137458479 -113229375 + L1PA15-16 LINE L1 2 733 -6116 2384 230 58 32 chr2 137458953 137459668 -113228186 + L1PA15-16 LINE L1 1414 2211 -4638 1931 152 0 0 chr2 137459668 137459965 -113227889 - AluSx SINE Alu -15 297 1 2384 230 58 32 chr2 137459965 137460108 -113227746 + L1PA15-16 LINE L1 2211 2349 -4500 678 235 108 51 chr2 137460112 137460440 -113227414 - LTR34 LTR ERV1 -154 457 186 354 213 93 19 chr2 137460570 137460678 -113227176 - MER4C LTR ERV1 -346 119 4 1156 181 70 30 chr2 137460878 137461148 -113226706 + AluJo SINE Alu 1 281 -31 285 284 98 0 chr2 137461403 137461611 -113226243 - L1 LINE L1 -783 5363 5129 1726 160 14 7 chr2 137461613 137461900 -113225954 + AluJb SINE Alu 1 289 -23 515 271 26 0 chr2 137461902 137462100 -113225754 - L1M3 LINE L1 -679 5489 5286 345 200 17 0 chr2 137462173 137462233 -113225621 - AluJ/FRAM SINE Alu -12 290 230 1800 242 48 8 chr2 137462388 137462912 -113224942 - L1MA6 LINE L1 -49 6251 5707 866 20 0 0 chr2 137462912 137463013 -113224841 - AluYb8 SINE Alu -5 313 213 479 298 29 50 chr2 137463024 137463395 -113224459 - L1MA6 LINE L1 -575 5593 5297 203 133 0 0 chr2 137463614 137463644 -113224210 + (GA)n Simple_repeat Simple_repeat 1 30 0 2230 267 53 23 chr2 137463682 137464932 -113222922 - L1PA16 LINE L1 -243 5923 4629 1824 291 21 63 chr2 137464954 137466027 -113221827 - L1MA6 LINE L1 -10 6290 5263 460 331 32 26 chr2 137466351 137466692 -113221162 - L1MA6 LINE L1 -1094 5052 4710 755 271 95 26 chr2 137466886 137467298 -113220556 - L1MA6 LINE L1 -33 6267 5832 6124 96 19 0 chr2 137467419 137468429 -113219425 + L1PA4 LINE L1 5126 6152 -3 324 195 55 109 chr2 137468448 137468576 -113219278 - L1M4 LINE L1 -2932 3214 3094 2099 173 54 22 chr2 137468675 137469199 -113218655 - MER4-int LTR ERV1 -5970 628 37 2754 193 16 7 chr2 137469199 137469763 -113218091 - L1PA13 LINE L1 -3737 3060 2492 1201 275 108 20 chr2 137469782 137470124 -113217730 - L1PA13 LINE L1 -5934 853 482 472 127 0 14 chr2 137470144 137470215 -113217639 + L1PA12 LINE L1 1261 1330 -6251 379 222 0 0 chr2 137470227 137470299 -113217555 + L1PA12 LINE L1 1259 1330 -6244 7542 188 52 8 chr2 137470400 137471729 -113216125 - L1PA12 LINE L1 -5577 2004 617 1948 75 53 3 chr2 137474778 137475060 -113212794 + AluY SINE Alu 1 296 -15 319 292 11 6 chr2 137475308 137475486 -113212368 + (TG)n Simple_repeat Simple_repeat 2 180 0 1475 200 14 10 chr2 137477227 137477517 -113210337 + AluJb SINE Alu 3 293 -9 234 91 0 0 chr2 137477517 137477550 -113210304 + (GGGGA)n Simple_repeat Simple_repeat 2 34 0 282 287 201 11 chr2 137477766 137477940 -113209914 + MIR SINE MIR 56 262 0 22 35 0 0 chr2 137478217 137478246 -113209608 + AT_rich Low_complexity Low_complexity 1 29 0 265 339 53 35 chr2 137478950 137479121 -113208733 + L1MCa LINE L1 649 822 -5601 1203 271 95 68 chr2 137479159 137480974 -113206880 + L1MCc LINE L1 727 2803 -4319 1997 123 0 13 chr2 137481020 137481342 -113206512 - AluSg SINE Alu 0 310 1 27 49 0 0 chr2 137481447 137481488 -113206366 + AT_rich Low_complexity Low_complexity 1 41 0 1365 181 29 11 chr2 137481488 137481940 -113205914 - L1P4 LINE L1 -686 5480 5026 1212 240 16 46 chr2 137482931 137483235 -113204619 + AluJo SINE Alu 2 296 -6 2659 152 2 0 chr2 137483405 137483846 -113204008 + L1P LINE L1 1960 2401 -3745 215 220 154 5 chr2 137486815 137486923 -113200931 + MIR SINE MIR 61 187 -62 225 286 0 0 chr2 137489364 137489420 -113198434 + G-rich Low_complexity Low_complexity 1 56 0 2391 57 0 3 chr2 137489587 137489886 -113197968 - AluY SINE Alu -11 300 3 1865 119 17 0 chr2 137490622 137490916 -113196938 + AluSx SINE Alu 1 299 -13 241 148 19 37 chr2 137490933 137490987 -113196867 + Alu SINE Alu 250 302 0 1297 178 6 81 chr2 137490988 137491332 -113196522 + AluJb SINE Alu 3 302 0 395 313 8 8 chr2 137491345 137491479 -113196375 + L1MCa LINE L1 1003 1136 -5805 * 2024 190 81 10 chr2 137491471 137491966 -113195888 + L1MCa LINE L1 1029 1558 -4864 2164 139 3 3 chr2 137491970 137492280 -113195574 + AluSx SINE Alu 1 310 -2 1821 181 0 13 chr2 137492301 137492440 -113195414 + AluSx SINE Alu 1 140 -172 2287 49 0 0 chr2 137492440 137492705 -113195149 + AluY SINE Alu 42 306 -5 1821 181 0 13 chr2 137492705 137492868 -113194986 + AluSx SINE Alu 140 299 -13 562 114 165 32 chr2 137492890 137492901 -113194953 + L1MCa LINE L1 2356 2364 -4577 1432 172 137 4 chr2 137492901 137493163 -113194691 + AluJo SINE Alu 2 298 -4 562 114 165 32 chr2 137493163 137493309 -113194545 + L1MCa LINE L1 2364 2534 -4407 1410 164 34 38 chr2 137493374 137493636 -113194218 - AluJo SINE Alu -49 263 3 1273 236 9 51 chr2 137493636 137493971 -113193883 - L1M4c LINE L1 -5816 568 248 615 213 0 0 chr2 137493972 137494094 -113193760 - MLT2B1 LTR ERVL -396 124 3 544 53 0 0 chr2 137494095 137494171 -113193683 - ERVL-B1 LTR ERVL -6 5758 5683 1820 225 134 31 chr2 137494214 137494766 -113193088 - MER50 LTR ERV1 0 734 126 2229 107 17 0 chr2 137494772 137495071 -113192783 - AluSx SINE Alu -8 304 1 1657 161 7 7 chr2 137495218 137495498 -113192356 + AluJo SINE Alu 7 286 -26 960 204 17 6 chr2 137496489 137496670 -113191184 - AluJb SINE Alu -22 290 108 21 0 0 0 chr2 137498254 137498275 -113189579 + AT_rich Low_complexity Low_complexity 1 21 0 1752 160 3 10 chr2 137498280 137498568 -113189286 + AluSx SINE Alu 1 286 -26 372 287 138 52 chr2 137498839 137499107 -113188747 - L2 LINE L2 0 3313 3023 2450 298 89 37 chr2 137499449 137500264 -113187590 - L2 LINE L2 -270 3043 2272 2093 125 0 0 chr2 137500264 137500559 -113187295 + AluSx SINE Alu 1 295 -17 2450 298 89 37 chr2 137500559 137500823 -113187031 - L2 LINE L2 -1041 2272 1893 24473 32 4 1 chr2 137500823 137504492 -113183362 + L1PA3 LINE L1 2545 6155 0 2450 298 89 37 chr2 137504492 137504616 -113183238 - L2 LINE L2 -1420 1893 1777 467 221 11 11 chr2 137505203 137505298 -113182556 + MER58A DNA MER1_type 4 98 -9 946 184 0 0 chr2 137505311 137505469 -113182385 + AluJb SINE Alu 132 289 -23 399 197 0 0 chr2 137505476 137505542 -113182312 + MER58A DNA MER1_type 159 224 0 231 260 100 87 chr2 137506113 137506140 -113181714 - L1ME LINE L1 -582 5539 5514 2145 147 12 14 chr2 137506140 137506486 -113181368 + L1PA15 LINE L1 5821 6165 0 231 260 100 87 chr2 137506486 137506608 -113181246 - L1ME LINE L1 -607 5514 5388 222 333 9 45 chr2 137506881 137506992 -113180862 - MIR3 SINE MIR -12 196 90 40 67 0 0 chr2 137507399 137507474 -113180380 + AT_rich Low_complexity Low_complexity 1 75 0 22 0 0 0 chr2 137507818 137507840 -113180014 + AT_rich Low_complexity Low_complexity 1 22 0 2424 83 3 0 chr2 137508532 137508834 -113179020 - AluY SINE Alu -8 303 1 1839 136 52 0 chr2 137509468 137509755 -113178099 - AluSc SINE Alu -7 302 1 920 224 47 47 chr2 137511832 137512046 -113175808 + MER58A DNA MER1_type 8 221 -3 190 290 58 0 chr2 137512051 137512120 -113175734 + L2 LINE L2 2677 2749 -565 722 270 192 23 chr2 137512126 137512511 -113175343 + MLT1L LTR MaLR 1 450 -165 309 192 0 0 chr2 137513490 137513542 -113174312 + MER91B DNA MER1_type 79 130 -60 3367 165 8 8 chr2 137513774 137514300 -113173554 + MER1A DNA MER1_type 1 526 -1 240 378 53 0 chr2 137514685 137514836 -113173018 + MIR SINE MIR 57 215 -47 624 189 9 9 chr2 137515525 137515631 -113172223 - U6 snRNA snRNA -1 106 1 387 300 96 12 chr2 137517449 137517661 -113170193 - MIR SINE MIR -28 234 7 210 154 0 0 chr2 137517732 137517771 -113170083 + A-rich Low_complexity Low_complexity 4 42 0 278 256 90 13 chr2 137518713 137518791 -113169063 + L2 LINE L2 3139 3222 -50 21 57 0 0 chr2 137518923 137518958 -113168896 + AT_rich Low_complexity Low_complexity 1 35 0 901 146 0 29 chr2 137519415 137519552 -113168302 + FLAM_C SINE Alu 1 133 0 833 169 0 0 chr2 137519822 137519946 -113167908 - FLAM_A SINE Alu -9 124 1 647 280 82 39 chr2 137521814 137522046 -113165808 + MIR SINE MIR 20 261 -1 440 256 71 18 chr2 137522139 137522307 -113165547 + MER104 DNA MER2_type 3 179 -1 2724 120 13 5 chr2 137522625 137523018 -113164836 - L1PA12 LINE L1 0 6168 5773 29 60 0 0 chr2 137523470 137523520 -113164334 + AT_rich Low_complexity Low_complexity 1 50 0 254 301 75 8 chr2 137524053 137524186 -113163668 - L1ME LINE L1 -485 5636 5495 2083 129 0 4 chr2 137524216 137524516 -113163338 - AluSg SINE Alu 0 299 1 2378 79 0 10 chr2 137525119 137525424 -113162430 - AluY SINE Alu -9 302 1 236 160 53 13 chr2 137526733 137526808 -113161046 + (CAAGC)n Simple_repeat Simple_repeat 4 81 0 270 205 37 0 chr2 137528234 137528303 -113159551 + MIR SINE MIR 46 117 -91 320 171 29 14 chr2 137529071 137529141 -113158713 - L1MA4A LINE L1 -9 6294 6224 2896 197 71 12 chr2 137529149 137530189 -113157665 - L1MA4A LINE L1 -171 6120 5007 2154 89 43 0 chr2 137530189 137530471 -113157383 - AluSc SINE Alu -15 294 1 2896 197 71 12 chr2 137530471 137530524 -113157330 - L1MA4A LINE L1 -1284 5007 4959 545 221 154 42 chr2 137530974 137531214 -113156640 - L1MC4 LINE L1 -5 8037 7771 1670 160 32 7 chr2 137531226 137531507 -113156347 - AluJb SINE Alu -24 288 1 436 285 22 7 chr2 137532973 137533110 -113154744 - MLT1J2 LTR MaLR -282 168 30 2351 253 41 39 chr2 137533444 137534777 -113153077 + L1PA16 LINE L1 4823 6152 -14 332 288 113 58 chr2 137534861 137535153 -113152701 + L1 LINE L1 4747 5054 -1092 251 243 65 47 chr2 137535345 137535452 -113152402 + L1 LINE L1 5161 5269 -877 1926 88 103 11 chr2 137585825 137586097 -113101757 + AluSp SINE Alu 1 297 -16 404 110 41 0 chr2 137588853 137588926 -113098928 + AluS SINE Alu 5 80 -233 1267 72 98 148 chr2 137588926 137589161 -113098693 + MSTA LTR MaLR 166 386 -42 2137 90 0 0 chr2 137589161 137589428 -113098426 - AluSx SINE Alu -45 267 1 1267 72 98 148 chr2 137589428 137589469 -113098385 + MSTA LTR MaLR 386 428 0 2061 118 13 16 chr2 137590170 137590483 -113097371 - AluSx SINE Alu 0 312 1 710 105 0 38 chr2 137590775 137590880 -113096974 - AluSg/x SINE Alu -23 286 186 961 278 73 40 chr2 137591121 137591570 -113096284 - LTR16B LTR ERVL 0 464 1 2196 114 0 3 chr2 137592049 137592339 -113095515 + AluSp SINE Alu 1 289 -24 708 69 30 10 chr2 137593682 137593783 -113094071 - AluSq/x SINE Alu -208 104 2 2448 80 13 0 chr2 137593868 137594170 -113093684 + AluSp SINE Alu 1 306 -7 212 181 0 69 chr2 137594207 137594279 -113093575 + G-rich Low_complexity Low_complexity 5 71 0 23 110 0 0 chr2 137594354 137594454 -113093400 + GC_rich Low_complexity Low_complexity 1 100 0 186 103 0 0 chr2 137598541 137598570 -113089284 + (TG)n Simple_repeat Simple_repeat 2 30 0 2315 87 3 0 chr2 137598823 137599112 -113088742 + AluSp SINE Alu 1 290 -23 366 266 128 52 chr2 137599190 137599479 -113088375 - L1ME4a LINE L1 -78 6043 5733 221 188 0 50 chr2 137599935 137600015 -113087839 + (TAA)n Simple_repeat Simple_repeat 1 76 0 2341 101 0 19 chr2 137600289 137600597 -113087257 - AluSg SINE Alu -8 302 1 195 129 0 0 chr2 137603427 137603458 -113084396 + (TC)n Simple_repeat Simple_repeat 2 32 0 796 62 0 0 chr2 137609452 137609549 -113078305 + L1P LINE L1 2 98 -6048 * 36491 40 2 2 chr2 137609543 137613944 -113073910 + L1P LINE L1 617 5016 -1130 668 143 56 32 chr2 137614062 137614188 -113073666 + Charlie3 DNA MER1_type 2577 2705 -5 189 263 132 53 chr2 137614364 137614478 -113073376 + MIR SINE MIR 13 135 -127 434 215 43 110 chr2 137614788 137614997 -113072857 - LOR1-int LTR ERV1 -2868 3730 3536 576 199 28 47 chr2 137615069 137615399 -113072455 - LOR1-int LTR ERV1 -2443 4311 2290 314 271 68 58 chr2 137615469 137615676 -113072178 - L1M4 LINE L1 -2361 3785 3577 529 249 28 55 chr2 137615941 137616158 -113071696 - HSATI Satellite Satellite -323 254 44 1758 42 0 54 chr2 137616641 137616881 -113070973 - L1PA4 LINE L1 0 6155 5929 2415 25 0 0 chr2 137616882 137617286 -113070568 + L1P2 LINE L1 5114 5517 -638 456 280 79 21 chr2 137618113 137618392 -113069462 + L1MB8 LINE L1 5864 6158 -20 186 278 74 28 chr2 137618673 137618781 -113069073 + MIR SINE MIR 19 131 -131 1608 276 47 11 chr2 137620547 137621247 -113066607 + L1M4 LINE L1 2339 3063 -3083 770 289 49 8 chr2 137621250 137621513 -113066341 + L1M4 LINE L1 457 730 -5812 1868 188 21 6 chr2 137621514 137622149 -113065705 + L1M1 LINE L1 3316 3968 -3597 3562 79 9 2 chr2 137623781 137624236 -113063618 + LTR22A LTR ERVK 1 458 0 211 150 0 62 chr2 137625198 137625278 -113062576 + (TG)n Simple_repeat Simple_repeat 2 76 0 805 152 8 8 chr2 137626527 137626659 -113061195 - AluJo SINE Alu -174 138 7 1066 198 0 59 chr2 137626753 137626990 -113060864 - AluJb SINE Alu -5 307 85 518 183 21 11 chr2 137626990 137627083 -113060771 - AluSc SINE Alu -61 248 155 336 239 0 0 chr2 137627085 137627248 -113060606 + (TG)n Simple_repeat Simple_repeat 2 164 0 557 238 0 8 chr2 137628346 137628472 -113059382 - MER67D LTR ERV1 -165 349 225 23 33 0 0 chr2 137628490 137628520 -113059334 + AT_rich Low_complexity Low_complexity 1 30 0 1541 84 0 0 chr2 137629678 137629869 -113057985 + AluSp SINE Alu 108 298 -15 267 190 30 80 chr2 137630069 137630169 -113057685 - L1M LINE L1 -2410 5398 5304 26 64 0 0 chr2 137630340 137630387 -113057467 + AT_rich Low_complexity Low_complexity 1 47 0 5761 62 0 16 chr2 137630887 137631628 -113056226 + L1PA7 LINE L1 5423 6151 -3 1900 125 14 4 chr2 137632126 137632406 -113055448 + AluSx SINE Alu 13 295 -17 374 0 22 0 chr2 137632414 137632460 -113055394 + (GGAA)n Simple_repeat Simple_repeat 2 48 0 213 132 0 0 chr2 137632845 137632883 -113054971 + (T)n Simple_repeat Simple_repeat 1 38 0 2274 89 10 0 chr2 137632939 137633231 -113054623 - AluSc SINE Alu -13 296 2 2510 51 6 13 chr2 137633286 137633599 -113054255 - AluY SINE Alu 0 311 1 1721 134 11 32 chr2 137634167 137634451 -113053403 + AluJb SINE Alu 35 312 0 1380 258 41 68 chr2 137634892 137635376 -113052478 - MLT1G1 LTR MaLR 0 595 125 3008 245 89 67 chr2 137636224 137636486 -113051368 + Tigger6b DNA MER2_type 1 256 -1341 2356 82 0 23 chr2 137636486 137636789 -113051065 - AluSc SINE Alu -13 296 1 3008 245 89 67 chr2 137636789 137637657 -113050197 + Tigger6b DNA MER2_type 256 1178 -419 230 0 33 0 chr2 137637657 137637687 -113050167 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 3008 245 89 67 chr2 137637687 137638116 -113049738 + Tigger6b DNA MER2_type 1178 1596 -1 2350 84 3 3 chr2 137639156 137639452 -113048402 + AluSp SINE Alu 1 296 -17 970 158 17 28 chr2 137640471 137640648 -113047206 - FAM SINE Alu 0 175 1 2146 114 30 0 chr2 137640918 137641216 -113046638 + AluY SINE Alu 1 307 -4 2111 124 0 0 chr2 137641656 137641980 -113045874 - AluSg SINE Alu 0 324 1 358 245 112 7 chr2 137642756 137642899 -113044955 + L2 LINE L2 1281 1438 -1876 2696 194 51 5 chr2 137643206 137643795 -113044059 - L1MB4 LINE L1 -28 6152 5537 448 322 114 26 chr2 137643830 137644258 -113043596 - L1M4 LINE L1 -6075 467 2 258 301 113 50 chr2 137644324 137644606 -113043248 + L2 LINE L2 2336 2635 -679 785 262 115 19 chr2 137646613 137647125 -113040729 + L1MC2 LINE L1 3016 3576 -2570 * 1982 270 55 12 chr2 137647107 137647797 -113040057 + L1MC2 LINE L1 5588 6307 -37 240 156 22 0 chr2 137648495 137648540 -113039314 + MER75 DNA T2_type 459 504 0 900 149 137 0 chr2 137648546 137648714 -113039140 + Charlie3 DNA MER1_type 1 191 -2519 668 188 7 45 chr2 137648625 137648779 -113039075 - Charlie3 DNA MER1_type -2380 330 183 * 474 29 0 0 chr2 137648772 137648841 -113039013 + Charlie3 DNA MER1_type 2528 2596 -114 * 303 261 11 0 chr2 137653755 137653843 -113034011 - MIR SINE MIR -113 149 61 1565 196 28 7 chr2 137654807 137655092 -113032762 + AluJo SINE Alu 3 293 -19 1594 132 147 0 chr2 137655264 137655522 -113032332 - AluSx SINE Alu -16 296 1 1909 145 0 14 chr2 137655948 137656245 -113031609 - AluJb SINE Alu -19 293 1 2274 120 3 0 chr2 137656305 137656604 -113031250 + AluSx SINE Alu 1 300 -12 206 319 18 31 chr2 137658221 137658384 -113029470 + GA-rich Low_complexity Low_complexity 1 161 0 1126 261 22 8 chr2 137661411 137661767 -113026087 + L1M4 LINE L1 4845 5205 -941 1834 177 3 10 chr2 137661771 137662071 -113025783 + AluJo SINE Alu 4 301 -11 693 75 123 9 chr2 137662073 137662179 -113025675 + AluSq/x SINE Alu 2 119 -193 210 167 0 119 chr2 137662426 137662510 -113025344 + C-rich Low_complexity Low_complexity 2 75 0 208 100 0 50 chr2 137663268 137663308 -113024546 + (CGGGG)n Simple_repeat Simple_repeat 5 42 0 222 204 0 0 chr2 137665431 137665475 -113022379 + GA-rich Low_complexity Low_complexity 2 45 0 466 256 242 22 chr2 137666058 137666327 -113021527 + L2 LINE L2 1782 2109 -1205 911 219 6 0 chr2 137666328 137666497 -113021357 - MER45A DNA AcHobo -1 177 8 1820 269 109 18 chr2 137666538 137667366 -113020488 + L2 LINE L2 2170 3049 -264 346 318 0 9 chr2 137667812 137667919 -113019935 + L2 LINE L2 3208 3313 0 362 251 87 104 chr2 137668735 137668773 -113019081 - L1ME4a LINE L1 0 6121 6084 1780 189 0 13 chr2 137668773 137669075 -113018779 + AluJo SINE Alu 3 300 -12 1948 89 92 0 chr2 137669080 137669351 -113018503 + AluSc SINE Alu 1 296 -13 362 251 87 104 chr2 137669351 137669489 -113018365 - L1ME4a LINE L1 -41 6080 5942 1021 235 91 3 chr2 137669863 137670161 -113017693 - MER5C DNA MER1_type 0 324 1 704 291 144 53 chr2 137670292 137670342 -113017512 - Charlie7 DNA MER1_type -1873 739 695 2557 48 0 22 chr2 137670342 137670654 -113017200 - AluY SINE Alu -6 305 1 704 291 144 53 chr2 137670654 137671076 -113016778 - Charlie7 DNA MER1_type -1917 695 190 7151 38 5 0 chr2 137671076 137672027 -113015827 + L1PA4 LINE L1 5200 6154 -1 704 291 144 53 chr2 137672027 137672199 -113015655 - Charlie7 DNA MER1_type -2422 190 35 227 294 0 124 chr2 137672266 137672399 -113015455 + MER5A DNA MER1_type 56 169 -20 2104 142 0 7 chr2 137672399 137672694 -113015160 - AluSx SINE Alu -19 293 1 227 294 0 124 chr2 137672694 137672713 -113015141 + MER5A DNA MER1_type 169 189 0 349 319 36 18 chr2 137672833 137672999 -113014855 - L1M4 LINE L1 -2665 3481 3313 2263 100 7 3 chr2 137673195 137673495 -113014359 + AluSg SINE Alu 1 301 -9 221 362 51 6 chr2 137674278 137674455 -113013399 + L2 LINE L2 2599 2783 -531 2481 86 0 0 chr2 137674751 137675054 -113012800 - AluY SINE Alu -8 303 1 713 320 148 48 chr2 137675056 137676034 -113011820 - L1M4 LINE L1 -768 5378 4303 748 337 69 23 chr2 137676621 137677263 -113010591 + L2 LINE L2 2632 3313 0 1641 102 14 0 chr2 137678186 137678402 -113009452 + AluSp SINE Alu 83 301 -12 323 288 117 45 chr2 137678953 137679175 -113008679 - MIR SINE MIR -11 251 14 2377 103 0 0 chr2 137680375 137680676 -113007178 - AluSg SINE Alu -9 301 1 331 231 19 0 chr2 137681455 137681563 -113006291 + CT-rich Low_complexity Low_complexity 2 111 0 2215 115 3 0 chr2 137681865 137682160 -113005694 - AluSx SINE Alu -11 301 6 189 0 0 0 chr2 137682886 137682907 -113004947 + (CGG)n Simple_repeat Simple_repeat 2 22 0 317 205 0 55 chr2 137682980 137683107 -113004747 + C-rich Low_complexity Low_complexity 3 122 0 1590 185 8 8 chr2 137683510 137683866 -113003988 + L1 LINE L1 2791 3146 -3000 1784 119 78 31 chr2 137683866 137684123 -113003731 + AluSg SINE Alu 1 275 -35 209 32 0 32 chr2 137684123 137684154 -113003700 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1784 119 78 31 chr2 137684154 137684189 -113003665 + AluSg SINE Alu 275 307 -3 225 158 53 0 chr2 137684216 137684273 -113003581 + (CAG)n Simple_repeat Simple_repeat 1 60 0 239 211 18 18 chr2 137684725 137684782 -113003072 - MER4A LTR ERV1 -351 313 257 * 436 149 106 11 chr2 137684775 137684869 -113002985 - MER4A LTR ERV1 -561 103 1 1764 150 20 3 chr2 137685418 137685712 -113002142 - AluSq SINE Alu -14 299 1 29 0 0 0 chr2 137686621 137686650 -113001204 + AT_rich Low_complexity Low_complexity 1 29 0 451 309 64 15 chr2 137687115 137687319 -113000535 + MIR SINE MIR 13 226 -36 186 270 32 0 chr2 137689235 137689298 -112998556 + L2 LINE L2 3206 3270 -2 279 242 247 32 chr2 137690654 137690840 -112997014 - MIR SINE MIR -21 241 16 200 333 155 0 chr2 137691396 137691564 -112996290 - MIR3 SINE MIR -12 196 3 222 37 0 0 chr2 137700412 137700439 -112987415 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7717 29 0 0 chr2 137700439 137701456 -112986398 - L1PA3 LINE L1 -6 6149 5132 319 266 144 36 chr2 137701884 137702106 -112985748 - L1M4 LINE L1 -769 5377 5132 242 326 0 28 chr2 137702140 137702284 -112985570 - L2 LINE L2 -1602 1712 1573 1925 168 72 27 chr2 137702284 137702814 -112985040 + MLT2A2 LTR ERVL 1 554 0 723 292 106 9 chr2 137702826 137703165 -112984689 - L2 LINE L2 -1749 1565 1194 3265 133 24 8 chr2 137703213 137703745 -112984109 - L1MC1 LINE L1 -257 6076 5536 24 32 0 0 chr2 137704334 137704365 -112983489 + AT_rich Low_complexity Low_complexity 1 31 0 356 86 0 17 chr2 137705104 137705162 -112982692 + (TG)n Simple_repeat Simple_repeat 2 58 0 5714 60 6 0 chr2 137705566 137706272 -112981582 + L1PA6 LINE L1 5445 6154 0 450 157 29 0 chr2 137706646 137706748 -112981106 + GA-rich Low_complexity Low_complexity 2 106 0 2206 114 0 13 chr2 137707919 137708226 -112979628 + AluSc SINE Alu 1 303 -6 2223 61 2 2 chr2 137708329 137708718 -112979136 - L1MC1 LINE L1 -686 5468 5108 2241 52 4 0 chr2 137708718 137708989 -112978865 + L1PA6 LINE L1 5515 5786 -368 3035 50 13 0 chr2 137710721 137711098 -112976756 + L1PA6 LINE L1 5770 6151 -3 2190 102 10 0 chr2 137711896 137712189 -112975665 - AluSq SINE Alu -2 311 16 1745 177 13 13 chr2 137712499 137712783 -112975071 + AluJo SINE Alu 1 287 -25 252 59 0 0 chr2 137712783 137712817 -112975037 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 1745 177 13 13 chr2 137712817 137712832 -112975022 + AluJo SINE Alu 286 300 -12 259 254 34 0 chr2 137713513 137713572 -112974282 + L2 LINE L2 3123 3183 -89 229 280 109 56 chr2 137714615 137714789 -112973065 + MER5A DNA MER1_type 7 188 -1 44319 44 3 7 chr2 137714920 137721102 -112966752 + L1PA4 LINE L1 1 6155 0 3990 88 11 0 chr2 137721110 137721644 -112966210 - L1PA7 LINE L1 -126 6028 5489 831 104 0 0 chr2 137721644 137721750 -112966104 + L1PA7 LINE L1 6032 6146 -8 26 0 0 0 chr2 137721768 137721794 -112966060 + AT_rich Low_complexity Low_complexity 1 26 0 252 0 0 0 chr2 137724146 137724174 -112963680 + (A)n Simple_repeat Simple_repeat 1 28 0 261 0 0 0 chr2 137725880 137725909 -112961945 + (A)n Simple_repeat Simple_repeat 1 29 0 25 75 0 0 chr2 137727725 137727778 -112960076 + AT_rich Low_complexity Low_complexity 1 53 0 529 275 179 5 chr2 137728104 137728311 -112959543 - MIR SINE MIR -16 246 4 303 281 60 60 chr2 137729535 137729752 -112958102 + L1M4 LINE L1 4023 4239 -1907 2530 68 3 3 chr2 137729827 137730138 -112957716 + AluY SINE Alu 1 311 0 315 232 101 56 chr2 137730260 137730458 -112957396 + L1M4 LINE L1 4496 4702 -1444 600 136 0 55 chr2 137730462 137730572 -112957282 + AluSg/x SINE Alu 206 309 -1 202 231 39 0 chr2 137731202 137731254 -112956600 + MER5A DNA MER1_type 136 189 0 392 228 20 30 chr2 137731264 137731365 -112956489 + MIR SINE MIR 20 119 -143 200 33 0 33 chr2 137732095 137732125 -112955729 + (TG)n Simple_repeat Simple_repeat 2 30 0 408 125 0 0 chr2 137732414 137732478 -112955376 + (TCCC)n Simple_repeat Simple_repeat 1 64 0 213 282 0 29 chr2 137733110 137733213 -112954641 + (CCG)n Simple_repeat Simple_repeat 2 101 0 2102 85 7 0 chr2 137733842 137734154 -112953700 + AluSp SINE Alu 13 326 0 2072 145 0 3 chr2 137738832 137739142 -112948712 - AluSx SINE Alu -3 309 1 615 239 45 97 chr2 137739317 137739606 -112948248 + L1MC4 LINE L1 6940 7213 -829 1472 188 3 24 chr2 137739613 137739905 -112947949 + AluJo SINE Alu 1 286 -26 1171 174 0 28 chr2 137739919 137740131 -112947723 + AluJb SINE Alu 85 290 -22 930 197 131 0 chr2 137740226 137740409 -112947445 - AluJo SINE Alu -18 294 88 1864 176 3 0 chr2 137740421 137740723 -112947131 - AluSx SINE Alu -9 303 1 279 250 0 0 chr2 137740746 137740806 -112947048 + L1MC4a LINE L1 7236 7295 -513 267 233 93 0 chr2 137740922 137741008 -112946846 + L1MC4 LINE L1 7566 7659 -383 942 235 25 35 chr2 137741043 137741263 -112946591 + L1MC4 LINE L1 7761 7979 -63 1657 171 10 29 chr2 137741263 137741573 -112946281 - AluJo SINE Alu -8 304 1 942 235 25 35 chr2 137741573 137741637 -112946217 + L1MC4 LINE L1 7979 8042 0 824 136 7 36 chr2 137741641 137741781 -112946073 + FLAM_A SINE Alu 5 140 -2 316 209 65 9 chr2 137741808 137741907 -112945947 + AluJ/FRAM SINE Alu 232 288 -14 1774 121 99 0 chr2 137741920 137742192 -112945662 + AluSq SINE Alu 1 299 -14 1544 195 10 3 chr2 137742209 137742506 -112945348 + AluJo SINE Alu 10 308 -4 1996 122 0 18 chr2 137742507 137742793 -112945061 + AluSx SINE Alu 2 282 -30 199 0 65 0 chr2 137742796 137742827 -112945027 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 230 81 27 0 chr2 137742862 137742899 -112944955 + (TG)n Simple_repeat Simple_repeat 1 38 0 1901 117 0 0 chr2 137742900 137743149 -112944705 - AluSx SINE Alu -63 249 1 29 0 0 0 chr2 137745740 137745769 -112942085 + AT_rich Low_complexity Low_complexity 1 29 0 1977 157 0 0 chr2 137745782 137746062 -112941792 - AluJb SINE Alu -24 288 9 1240 161 14 36 chr2 137746264 137746487 -112941367 - MER20 DNA MER1_type -1 218 1 723 184 40 0 chr2 137747763 137747888 -112939966 - FLAM_A SINE Alu -2 131 2 180 217 87 29 chr2 137748111 137748180 -112939674 - MIR SINE MIR -130 132 60 1461 173 39 52 chr2 137748454 137748760 -112939094 - AluJo SINE Alu -10 302 1 1683 172 3 3 chr2 137748866 137749151 -112938703 - AluJo SINE Alu -27 285 1 1990 132 3 0 chr2 137749187 137749482 -112938372 + AluSx SINE Alu 3 298 -14 215 307 13 13 chr2 137749547 137749622 -112938232 - MIR SINE MIR -10 252 178 623 171 150 14 chr2 137749622 137749762 -112938092 + MLT1E2 LTR MaLR 2 160 -464 * 1241 215 107 0 chr2 137749758 137750019 -112937835 + MLT1E2 LTR MaLR 330 618 -8 397 250 38 23 chr2 137750024 137750156 -112937698 - MIR SINE MIR -80 182 49 2012 145 0 0 chr2 137750288 137750599 -112937255 + AluSx SINE Alu 1 311 -1 2216 58 19 16 chr2 137750888 137751197 -112936657 - AluY SINE Alu -1 310 1 2218 68 3 26 chr2 137751200 137751510 -112936344 - AluSg1 SINE Alu -6 303 1 227 31 31 0 chr2 137751918 137751950 -112935904 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 240 250 0 0 chr2 137752884 137752936 -112934918 - L2 LINE L2 -12 3301 3250 23 0 0 0 chr2 137753187 137753210 -112934644 + GC_rich Low_complexity Low_complexity 1 23 0 624 177 62 0 chr2 137754045 137754158 -112933696 + FLAM_C SINE Alu 1 120 -13 1712 138 9 66 chr2 137755802 137755935 -112931919 + AluJo SINE Alu 13 152 -160 2364 60 0 13 chr2 137755935 137756234 -112931620 + AluY SINE Alu 1 295 -16 1712 138 9 66 chr2 137756234 137756418 -112931436 + AluJo SINE Alu 152 312 0 1650 159 0 0 chr2 137757570 137757834 -112930020 + AluJb SINE Alu 35 298 -14 754 178 15 30 chr2 137757849 137757984 -112929870 + AluJo SINE Alu 1 133 -169 1730 151 21 3 chr2 137758369 137758660 -112929194 - AluJo SINE Alu -7 305 10 742 219 26 7 chr2 137759076 137759227 -112928627 + AluJo SINE Alu 133 286 -26 2002 175 51 65 chr2 137760176 137760667 -112927187 - LTR42 LTR ERVL -11 484 1 23 0 0 0 chr2 137761918 137761941 -112925913 + AT_rich Low_complexity Low_complexity 1 23 0 1588 99 9 5 chr2 137762123 137762368 -112925486 - AluY SINE Alu 0 307 62 1703 164 7 11 chr2 137763998 137764131 -112923723 + AluSx SINE Alu 1 133 -175 2155 101 10 0 chr2 137764131 137764428 -112923426 + AluSx SINE Alu 1 300 -12 1703 164 7 11 chr2 137764428 137764603 -112923251 + AluSx SINE Alu 133 308 0 2185 101 7 0 chr2 137764660 137764957 -112922897 + AluSx SINE Alu 1 299 -13 2110 127 0 0 chr2 137766007 137766306 -112921548 - AluSx SINE Alu -13 299 1 1077 270 84 13 chr2 137768136 137768528 -112919326 + LTR33 LTR ERVL 10 429 -92 1619 187 13 22 chr2 137768529 137768844 -112919010 + AluJo SINE Alu 1 312 0 1664 161 13 3 chr2 137768914 137769212 -112918642 - AluJb SINE Alu -11 301 1 245 397 0 0 chr2 137769223 137769354 -112918500 + Charlie1 DNA MER1_type 2602 2732 -29 722 106 96 96 chr2 137770216 137770234 -112917620 - LTR23 LTR ERV1 -5 432 415 2160 89 6 13 chr2 137770234 137770549 -112917305 + AluSq SINE Alu 1 313 0 722 106 96 96 chr2 137770549 137770584 -112917270 - LTR23 LTR ERV1 -22 415 381 1722 144 0 64 chr2 137770584 137770896 -112916958 + AluSx SINE Alu 1 292 -20 722 106 96 96 chr2 137770896 137771029 -112916825 - LTR23 LTR ERV1 -55 382 245 444 178 14 0 chr2 137771033 137771106 -112916748 - FLAM SINE Alu -24 119 46 1104 133 42 88 chr2 137771118 137771154 -112916700 - LTR23 LTR ERV1 -185 252 216 2232 119 3 0 chr2 137771154 137771466 -112916388 + AluSq SINE Alu 1 313 0 2278 71 0 3 chr2 137771467 137771762 -112916092 + AluY SINE Alu 1 294 -17 1104 133 42 88 chr2 137771762 137771986 -112915868 - LTR23 LTR ERV1 -220 217 2 644 194 0 8 chr2 137772104 137772233 -112915621 - FLAM_A SINE Alu 0 142 15 1228 198 186 27 chr2 137772635 137772969 -112914885 - MLT1B LTR MaLR 0 390 4 1342 195 179 7 chr2 137773046 137773343 -112914511 - MER7A DNA MER2_type 0 346 1 248 185 0 0 chr2 137773349 137773403 -112914451 - L1ME4a LINE L1 0 6121 6068 516 116 58 0 chr2 137774391 137774477 -112913377 - AluSc SINE Alu 0 309 219 839 116 47 16 chr2 137774967 137775096 -112912758 - FLAM_C SINE Alu 0 133 1 2291 95 0 0 chr2 137775761 137776056 -112911798 + AluSq SINE Alu 1 295 -18 1364 215 82 49 chr2 137776435 137776658 -112911196 - Charlie1 DNA MER1_type 0 2761 2547 2223 113 0 0 chr2 137776658 137776967 -112910887 - AluSx SINE Alu -3 309 1 1364 215 82 49 chr2 137776967 137777194 -112910660 - Charlie1 DNA MER1_type -214 2547 2296 738 196 0 8 chr2 137777317 137777450 -112910404 + FLAM_C SINE Alu 2 133 -10 530 264 79 0 chr2 137828847 137828987 -112858867 + MIR SINE MIR 41 191 -71 1386 64 0 0 chr2 137828997 137829169 -112858685 + AluY SINE Alu 131 302 -9 219 69 0 0 chr2 137829984 137830013 -112857841 + (CA)n Simple_repeat Simple_repeat 2 30 0 788 218 39 24 chr2 137831371 137831577 -112856277 - MER3 DNA MER1_type 0 209 1 1436 134 9 99 chr2 137832072 137832416 -112855438 - L1MB8 LINE L1 -21 6157 5845 296 304 9 0 chr2 137833273 137833385 -112854469 + (TG)n Simple_repeat Simple_repeat 2 114 0 1306 113 18 106 chr2 137835118 137835393 -112852461 + MER2 DNA MER2_type 1 251 -94 25 31 0 0 chr2 137835766 137835798 -112852056 + AT_rich Low_complexity Low_complexity 1 32 0 182 347 27 13 chr2 137836708 137836783 -112851071 + MIR SINE MIR 17 92 -116 17050 33 4 1 chr2 137837196 137840018 -112847836 - L1PA4 LINE L1 -2 6153 3324 2304 101 0 0 chr2 137840168 137840464 -112847390 - AluY SINE Alu -15 296 1 2367 110 3 0 chr2 137840718 137841028 -112846826 - AluSq SINE Alu -2 311 1 279 286 62 56 chr2 137841497 137841675 -112846179 + L2 LINE L2 2304 2482 -832 233 340 19 28 chr2 137841763 137841869 -112845985 - L2 LINE L2 -2 3270 3166 1219 69 0 0 chr2 137842197 137842357 -112845497 - L1PA4 LINE L1 -3 6152 5993 1347 96 21 11 chr2 137842787 137842974 -112844880 - AluSq SINE Alu -124 189 1 1103 140 90 0 chr2 137843446 137843624 -112844230 + AluSx SINE Alu 1 194 -118 1355 133 177 4 chr2 137843646 137843872 -112843982 - AluSx SINE Alu -47 265 1 23 54 0 0 chr2 137843932 137843969 -112843885 + AT_rich Low_complexity Low_complexity 1 37 0 245 245 113 0 chr2 137844028 137844081 -112843773 - MIR SINE MIR -112 96 38 2382 78 0 13 chr2 137844283 137844590 -112843264 - AluSc SINE Alu -6 303 1 462 333 75 0 chr2 137844914 137845061 -112842793 - L2 LINE L2 -2 3270 3113 193 328 49 0 chr2 137845141 137845202 -112842652 + L2 LINE L2 3205 3268 -4 21 0 0 0 chr2 137847438 137847459 -112840395 + AT_rich Low_complexity Low_complexity 1 21 0 1828 215 11 11 chr2 137848178 137848624 -112839230 + L1M4 LINE L1 4759 5204 -942 895 155 18 36 chr2 137848625 137848793 -112839061 + FRAM SINE Alu 1 165 -1 9207 140 28 30 chr2 137848827 137849109 -112838745 + Tigger1 DNA MER2_type 13 294 -2124 1663 175 14 0 chr2 137849109 137849401 -112838453 - AluJo SINE Alu -16 296 1 9207 140 28 30 chr2 137849401 137849978 -112837876 + Tigger1 DNA MER2_type 294 871 -1547 1749 104 10 97 chr2 137849978 137850112 -112837742 + AluSg SINE Alu 1 145 -159 1991 118 0 30 chr2 137850112 137850409 -112837445 + AluSx SINE Alu 1 288 -24 1749 104 10 97 chr2 137850409 137850605 -112837249 + AluSg SINE Alu 145 304 0 9207 140 28 30 chr2 137850605 137851324 -112836530 + Tigger1 DNA MER2_type 871 1590 -828 2241 75 3 3 chr2 137851326 137851619 -112836235 + AluSp SINE Alu 2 294 -19 1921 154 78 0 chr2 137851624 137851981 -112835873 + L1MA9 LINE L1 5728 6112 -200 1919 84 4 33 chr2 137851981 137852255 -112835599 + AluY SINE Alu 28 293 -18 1272 43 0 25 chr2 137852259 137852422 -112835432 + AluY SINE Alu 1 159 -152 374 56 0 19 chr2 137852422 137852476 -112835378 + (TA)n Simple_repeat Simple_repeat 2 54 0 706 91 0 66 chr2 137852477 137852598 -112835256 + L1MA9 LINE L1 6105 6217 -95 678 169 17 0 chr2 137852613 137852731 -112835123 - Tigger1 DNA MER2_type 0 2418 2299 637 217 0 86 chr2 137852737 137852912 -112834942 + FRAM SINE Alu 4 163 -13 424 147 0 39 chr2 137852915 137853017 -112834837 - Tigger1 DNA MER2_type -111 2307 2210 2193 78 0 7 chr2 137853022 137853341 -112834513 + AluY SINE Alu 1 311 0 323 26 0 0 chr2 137853346 137853384 -112834470 + L1M LINE L1 5360 5397 -915 1727 146 38 7 chr2 137853384 137853671 -112834183 + AluSx SINE Alu 1 296 -16 1218 125 54 1 chr2 137853692 137853905 -112833949 + L1M2 LINE L1 5356 5582 -547 12464 121 44 44 chr2 137853905 137855127 -112832727 - Tigger1 DNA MER2_type -217 2201 980 1908 119 10 17 chr2 137855127 137855421 -112832433 + AluSc SINE Alu 1 292 -17 12464 121 44 44 chr2 137855421 137855802 -112832052 - Tigger1 DNA MER2_type -1438 980 600 1674 185 10 0 chr2 137855802 137856094 -112831760 + AluJo SINE Alu 1 295 -17 12464 121 44 44 chr2 137856094 137856589 -112831265 - Tigger1 DNA MER2_type -1818 600 103 3598 53 8 26 chr2 137856591 137856672 -112831182 + L1PA8 LINE L1 5706 5787 -385 2092 85 32 0 chr2 137856672 137856954 -112830900 + AluSx SINE Alu 2 292 -20 3598 53 8 26 chr2 137856954 137857340 -112830514 + L1PA8 LINE L1 5787 6165 -7 25 0 0 0 chr2 137857343 137857368 -112830486 + AT_rich Low_complexity Low_complexity 1 25 0 370 188 182 41 chr2 137857386 137857556 -112830298 + Charlie5 DNA MER1_type 2350 2543 -69 319 256 25 74 chr2 137857558 137857679 -112830175 - Tigger1 DNA MER2_type -2303 115 1 256 108 0 0 chr2 137857686 137857723 -112830131 + L1MA9 LINE L1 6272 6308 -4 930 236 56 23 chr2 137857731 137858183 -112829671 + L1M4c LINE L1 1648 2207 -4177 1039 83 0 0 chr2 137858210 137858342 -112829512 + AluY SINE Alu 1 132 -179 986 169 74 123 chr2 137858347 137858358 -112829496 + L1M4c LINE L1 2277 2287 -4095 1947 117 0 3 chr2 137858358 137858679 -112829175 + AluSg SINE Alu 1 320 0 986 169 74 123 chr2 137858679 137858819 -112829035 + L1M4c LINE L1 2287 2432 -3950 1935 129 3 0 chr2 137858819 137859113 -112828741 - AluSg SINE Alu -15 295 1 986 169 74 123 chr2 137859113 137859147 -112828707 + L1M4c LINE L1 2432 2466 -3916 1849 143 0 10 chr2 137859147 137859441 -112828413 + AluSx SINE Alu 10 300 -12 986 169 74 123 chr2 137859441 137859564 -112828290 + L1M4c LINE L1 2466 2594 -3788 2234 94 0 0 chr2 137859564 137859862 -112827992 + AluSx SINE Alu 1 298 -14 986 169 74 123 chr2 137859862 137860104 -112827750 + L1M4c LINE L1 2594 2824 -3558 * 9764 201 59 31 chr2 137860099 137860855 -112826999 + L1MB4 LINE L1 2315 3049 -3131 2230 62 21 0 chr2 137860855 137861143 -112826711 + AluY SINE Alu 1 294 -17 9764 201 59 31 chr2 137861143 137862635 -112825219 + L1MB4 LINE L1 3049 4499 -1681 2385 75 0 10 chr2 137862635 137862943 -112824911 + AluY SINE Alu 1 305 -6 9764 201 59 31 chr2 137862943 137863966 -112823888 + L1MB4 LINE L1 4499 5493 -687 889 161 0 0 chr2 137863966 137864096 -112823758 + FLAM_A SINE Alu 4 133 0 9764 201 59 31 chr2 137864096 137864111 -112823743 + L1MB4 LINE L1 5493 5506 -674 2356 78 7 0 chr2 137864111 137864420 -112823434 + AluSp SINE Alu 1 311 -2 9764 201 59 31 chr2 137864420 137864857 -112822997 + L1MB4 LINE L1 5506 6140 -40 1294 271 74 65 chr2 137864906 137865811 -112822043 + L1M4c LINE L1 2810 3722 -2660 1238 169 4 21 chr2 137865832 137866075 -112821779 - AluJo SINE Alu -35 277 39 499 166 20 24 chr2 137866094 137866201 -112821653 - MLT1D LTR MaLR 0 505 413 503 269 101 10 chr2 137866350 137866558 -112821296 - L1ME LINE L1 -336 5785 5559 229 344 66 26 chr2 137867022 137867173 -112820681 + MER91A DNA MER1_type 27 183 -13 231 308 75 25 chr2 137868293 137868413 -112819441 - MIR SINE MIR -29 233 108 264 118 0 79 chr2 137868684 137868760 -112819094 + (CACG)n Simple_repeat Simple_repeat 3 72 0 210 235 20 0 chr2 137870318 137870369 -112817485 + GA-rich Low_complexity Low_complexity 2 53 0 354 218 293 0 chr2 137870381 137870514 -112817340 - MER5A DNA MER1_type 0 189 18 242 239 123 87 chr2 137870565 137870703 -112817151 - MIR SINE MIR -92 170 28 189 247 108 11 chr2 137871343 137871436 -112816418 + MER5A DNA MER1_type 32 133 -56 180 242 58 83 chr2 137871345 137871438 -112816416 - MER5A DNA MER1_type -22 167 76 * 2184 94 16 3 chr2 137871438 137871745 -112816109 - AluY SINE Alu 0 311 1 180 242 58 83 chr2 137871745 137871771 -112816083 - MER5A DNA MER1_type -113 76 51 220 322 87 44 chr2 137872017 137872200 -112815654 - MIR SINE MIR -1 261 71 369 262 19 19 chr2 137873718 137873821 -112814033 + MLT1J2 LTR MaLR 281 383 -67 2150 100 0 0 chr2 137873822 137874147 -112813707 + AluY SINE Alu 1 311 0 368 323 139 6 chr2 137874341 137874499 -112813355 + MIR SINE MIR 72 250 -12 2462 57 0 0 chr2 137876620 137876917 -112810937 - AluY SINE Alu -14 297 1 2217 92 3 0 chr2 137878239 137878533 -112809321 - AluY SINE Alu -16 295 1 1646 151 43 23 chr2 137878799 137879104 -112808750 + AluSx SINE Alu 1 311 -1 330 184 303 9 chr2 137879234 137879343 -112808511 - MIR SINE MIR -113 149 9 258 167 33 17 chr2 137880851 137880911 -112806943 + L1ME LINE L1 5531 5591 -530 565 254 28 11 chr2 137880917 137881098 -112806756 + L1MC5 LINE L1 7724 7907 -54 2297 125 17 3 chr2 137881167 137881527 -112806327 - MER47A DNA MER2_type -1 365 1 1887 109 58 3 chr2 137881578 137881871 -112805983 + AluSq SINE Alu 1 309 -4 300 293 121 13 chr2 137881873 137882030 -112805824 + L1ME LINE L1 5647 5820 -301 2905 180 74 5 chr2 137882138 137882704 -112805150 + MER6A DNA MER2_type 1 605 0 2374 66 0 3 chr2 137882773 137883074 -112804780 - AluY SINE Alu -9 302 3 438 259 147 21 chr2 137884482 137884625 -112803229 + MIR3 SINE MIR 3 163 -45 5409 228 89 41 chr2 137885021 137886658 -112801196 + L1MD2 LINE L1 9 1723 -4817 571 283 85 20 chr2 137886635 137886989 -112800865 + L1MD2 LINE L1 3482 3858 -2682 * 716 192 26 7 chr2 137887021 137887172 -112800682 + MLT1B LTR MaLR 191 344 -46 2437 55 0 6 chr2 137887187 137887498 -112800356 + AluY SINE Alu 1 309 -2 1924 198 24 18 chr2 137887503 137887958 -112799896 + L1MD2 LINE L1 3869 4326 -2214 1079 138 113 39 chr2 137887958 137888189 -112799665 + AluJo SINE Alu 35 282 -30 278 206 14 0 chr2 137888201 137888274 -112799580 + GA-rich Low_complexity Low_complexity 1 74 0 350 226 49 0 chr2 137888303 137888405 -112799449 + L1MD2 LINE L1 4330 4436 -2104 2174 245 43 42 chr2 137888504 137888526 -112799328 + L1MD2 LINE L1 4426 4446 -2094 2099 71 10 34 chr2 137888526 137888823 -112799031 + AluY SINE Alu 1 290 -21 2174 245 43 42 chr2 137888823 137889067 -112798787 + L1MD2 LINE L1 4446 4688 -1852 1991 109 20 3 chr2 137889067 137889361 -112798493 + AluSq SINE Alu 1 299 -14 2174 245 43 42 chr2 137889361 137889901 -112797953 + L1MD2 LINE L1 4688 5234 -1306 429 205 42 42 chr2 137889928 137890094 -112797760 + L1MD2 LINE L1 5369 5534 -1006 964 114 0 0 chr2 137890102 137890234 -112797620 + AluSp/q SINE Alu 156 287 -26 2388 61 0 0 chr2 137890235 137890532 -112797322 + AluY SINE Alu 1 297 -14 1127 191 113 38 chr2 137890532 137890851 -112797003 + L1MD2 LINE L1 6196 6538 -215 289 255 38 0 chr2 137890883 137890989 -112796865 + L1MD3 LINE L1 7885 7994 -1 1370 183 39 7 chr2 137891834 137892119 -112795735 + AluJo SINE Alu 1 294 -18 2092 100 10 0 chr2 137892303 137892592 -112795262 + AluSg SINE Alu 1 292 -18 1553 150 20 33 chr2 137893345 137893645 -112794209 + AluJb SINE Alu 1 296 -16 241 258 34 45 chr2 137893759 137893848 -112794006 + MER5B DNA MER1_type 1 88 -90 22 80 0 0 chr2 137893861 137893911 -112793943 + AT_rich Low_complexity Low_complexity 1 50 0 279 333 58 29 chr2 137894049 137894090 -112793764 - L1ME LINE L1 -375 5746 5708 1887 163 0 0 chr2 137894090 137894396 -112793458 + AluJb SINE Alu 1 306 -6 279 333 58 29 chr2 137894396 137894561 -112793293 - L1ME LINE L1 -413 5708 5534 1883 123 7 0 chr2 137894646 137894923 -112792931 + AluSq SINE Alu 16 294 -19 2375 90 0 0 chr2 137895081 137895391 -112792463 - AluSx SINE Alu -2 310 1 348 277 163 21 chr2 137895559 137895700 -112792154 - HAL1b LINE L1 -1087 261 101 276 227 337 18 chr2 137895851 137896014 -112791840 - L2 LINE L2 -66 3247 3033 2040 223 22 11 chr2 137896860 137897313 -112790541 + MLT1C LTR MaLR 1 458 -9 1609 100 4 9 chr2 137897957 137898188 -112789666 - AluSg1 SINE Alu -79 230 1 1032 180 12 0 chr2 137898703 137898875 -112788979 - FAM SINE Alu -1 174 1 2234 100 10 3 chr2 137899350 137899650 -112788204 + AluSx SINE Alu 1 302 -10 1821 185 13 0 chr2 137900289 137900586 -112787268 + AluJb SINE Alu 1 301 -11 1965 123 0 79 chr2 137900586 137900904 -112786950 + AluSg SINE Alu 1 293 -17 220 328 71 77 chr2 137901316 137901499 -112786355 - L2 LINE L2 -19 3253 3072 383 250 135 26 chr2 137901763 137901919 -112785935 + MIR SINE MIR 34 206 -56 2021 61 61 68 chr2 137902219 137902537 -112785317 + AluSp SINE Alu 1 313 0 2209 102 30 0 chr2 137902887 137903190 -112784664 + AluSp SINE Alu 1 312 -1 811 54 0 0 chr2 137904077 137904169 -112783685 + AluSq/x SINE Alu 44 135 -177 2386 101 7 0 chr2 137904169 137904476 -112783378 + AluSg SINE Alu 1 309 -1 373 269 92 21 chr2 137904741 137904882 -112782972 + L1ME LINE L1 5548 5698 -423 2215 108 0 7 chr2 137905166 137905462 -112782392 - AluSx SINE Alu -18 294 1 2681 54 0 10 chr2 137905536 137905850 -112782004 - AluY SINE Alu 0 311 1 406 279 65 19 chr2 137906508 137906662 -112781192 - L2 LINE L2 -2 3311 3151 1526 128 120 4 chr2 137907031 137907265 -112780589 - AluSg SINE Alu -49 261 1 1987 130 25 0 chr2 137907306 137907590 -112780264 - AluSx SINE Alu -21 291 1 1419 155 114 75 chr2 137907699 137908060 -112779794 + THE1C LTR MaLR 1 375 0 227 267 35 12 chr2 137908468 137908554 -112779300 + L1MC5 LINE L1 6695 6782 -1179 2434 95 0 3 chr2 137908785 137909091 -112778763 + AluSc SINE Alu 5 309 0 2376 132 25 3 chr2 137909103 137909459 -112778395 + THE1B LTR MaLR 1 364 0 2702 108 11 1 chr2 137909459 137910011 -112777843 + THE1B-int LTR MaLR 1 597 -983 2134 48 4 0 chr2 137910022 137910272 -112777582 + AluY SINE Alu 13 263 -48 303 289 134 42 chr2 137910272 137910556 -112777298 + HAL1 LINE L1 48 357 -2150 460 229 49 38 chr2 137910757 137910940 -112776914 + HAL1 LINE L1 680 864 -1643 1391 106 25 123 chr2 137910953 137911067 -112776787 - MER21A LTR ERV1 -26 905 781 1624 183 43 0 chr2 137911067 137911346 -112776508 + AluJb SINE Alu 7 297 -15 1391 106 25 123 chr2 137911346 137911515 -112776339 - MER21A LTR ERV1 -150 781 650 1163 153 109 12 chr2 137911722 137911970 -112775884 + LTR23 LTR ERV1 161 432 -5 2375 197 81 26 chr2 137911972 137912514 -112775340 - MER21B LTR ERV1 -291 572 1 371 240 48 72 chr2 137912514 137912639 -112775215 + HAL1 LINE L1 851 972 -1535 2366 109 0 0 chr2 137912643 137912956 -112774898 + AluSq SINE Alu 1 313 0 826 238 137 38 chr2 137912963 137913128 -112774726 + HAL1 LINE L1 1060 1207 -1300 2195 119 0 3 chr2 137913128 137913422 -112774432 + AluSx SINE Alu 1 293 -19 826 238 137 38 chr2 137913422 137913761 -112774093 + HAL1 LINE L1 1207 1614 -893 1485 189 18 18 chr2 137913761 137914042 -112773812 + AluJo SINE Alu 1 281 -31 357 246 70 107 chr2 137914047 137914234 -112773620 + HAL1 LINE L1 1807 1986 -521 * 448 275 107 90 chr2 137914231 137914307 -112773547 + HAL1 LINE L1 2259 2332 -175 2322 95 0 3 chr2 137914307 137914601 -112773253 - AluY SINE Alu -18 293 1 448 275 107 90 chr2 137914601 137914719 -112773135 + HAL1 LINE L1 2332 2460 -47 2197 123 0 3 chr2 137914719 137915027 -112772827 - AluSq SINE Alu -6 307 1 448 275 107 90 chr2 137915027 137915075 -112772779 + HAL1 LINE L1 2460 2506 -1 927 134 0 15 chr2 137915249 137915383 -112772471 - AluJb SINE Alu -180 132 1 268 341 57 0 chr2 137915491 137915614 -112772240 + MIR SINE MIR 127 256 -6 1261 106 156 0 chr2 137915701 137915900 -112771954 - MER30 DNA MER1_type 0 230 1 21 0 0 0 chr2 137916183 137916204 -112771650 + AT_rich Low_complexity Low_complexity 1 21 0 506 301 40 23 chr2 137916255 137916428 -112771426 + MIR SINE MIR 20 195 -67 2316 105 0 3 chr2 137916470 137916775 -112771079 + AluSq SINE Alu 1 304 -9 333 354 62 11 chr2 137917572 137917750 -112770104 - L2 LINE L2 -9 3263 3077 227 289 0 0 chr2 137917983 137918035 -112769819 + MIR SINE MIR 56 107 -101 23 33 0 0 chr2 137919151 137919181 -112768673 + GC_rich Low_complexity Low_complexity 1 30 0 29 0 0 0 chr2 137919289 137919318 -112768536 + AT_rich Low_complexity Low_complexity 1 29 0 1693 226 189 12 chr2 137919320 137919983 -112767871 + L1MC3 LINE L1 6710 7489 -296 472 155 223 0 chr2 137920018 137920166 -112767688 + L1MD3 LINE L1 7805 7985 -10 502 232 104 0 chr2 137920192 137920317 -112767537 + AluJo SINE Alu 122 259 -53 435 193 50 79 chr2 137920317 137920491 -112767363 + L1ME3 LINE L1 5976 6131 -31 793 142 15 22 chr2 137920492 137920626 -112767228 + AluJo/FLAM SINE Alu 1 133 -169 236 163 47 0 chr2 137920626 137920669 -112767185 + AluJo/FLAM SINE Alu 133 177 -126 1427 70 16 0 chr2 137920671 137920857 -112766997 + AluY SINE Alu 116 304 -7 399 202 87 0 chr2 137921286 137921390 -112766464 + L1ME4a LINE L1 6007 6119 -2 1733 189 0 23 chr2 137921401 137921703 -112766151 + AluJb SINE Alu 1 295 -17 2128 111 7 7 chr2 137921703 137921991 -112765863 - AluSg SINE Alu -20 290 3 2407 99 0 6 chr2 137922101 137922414 -112765440 + AluSx SINE Alu 1 311 -1 662 158 100 0 chr2 137922734 137922854 -112765000 + AluJb SINE Alu 2 133 -179 2600 54 0 10 chr2 137922986 137923300 -112764554 - AluY SINE Alu 0 311 1 2432 93 3 0 chr2 137923612 137923922 -112763932 - AluSp SINE Alu -2 311 1 2123 117 0 3 chr2 137924313 137924634 -112763220 - AluSg SINE Alu 0 320 1 1373 193 6 94 chr2 137924634 137924824 -112763030 - AluSq SINE Alu -11 302 152 2486 70 0 0 chr2 137924824 137925122 -112762732 - AluY SINE Alu -13 298 1 1373 193 6 94 chr2 137925122 137925262 -112762592 - AluSq SINE Alu -161 152 1 328 130 0 130 chr2 137925262 137925339 -112762515 - AluJo SINE Alu -160 142 76 482 239 101 105 chr2 137925365 137925466 -112762388 + MER63 DNA MER1_type 786 886 -174 2498 60 3 3 chr2 137925466 137925768 -112762086 - AluY SINE Alu -9 302 1 482 239 101 105 chr2 137925768 137925792 -112762062 + MER63 DNA MER1_type 886 909 -151 2239 90 13 3 chr2 137925792 137926091 -112761763 - AluSg SINE Alu -7 303 2 482 239 101 105 chr2 137926091 137926240 -112761614 + MER63 DNA MER1_type 909 1060 0 682 256 57 49 chr2 137926240 137926402 -112761452 - L1ME LINE L1 -387 5777 5618 1664 134 0 8 chr2 137926412 137926659 -112761195 - AluSg/x SINE Alu 0 312 68 1431 176 6 89 chr2 137926659 137926818 -112761036 - AluJo SINE Alu -24 288 117 2174 112 3 13 chr2 137926818 137927122 -112760732 - AluSq SINE Alu -12 301 1 339 85 0 0 chr2 137927122 137927169 -112760685 + (TG)n Simple_repeat Simple_repeat 2 48 0 1431 176 6 89 chr2 137927169 137927321 -112760533 - AluJo SINE Alu -193 119 1 2145 100 7 0 chr2 137927323 137927633 -112760221 - AluSx SINE Alu 0 312 1 682 256 57 49 chr2 137927633 137927712 -112760142 - L1ME LINE L1 -546 5618 5530 1820 70 0 0 chr2 137927731 137927946 -112759908 - AluSc SINE Alu -24 285 71 2325 81 7 10 chr2 137927946 137928239 -112759615 - AluSc SINE Alu -15 294 1 1544 271 97 45 chr2 137928249 137928510 -112759344 - L1MC4a LINE L1 -1630 6178 5932 2508 69 13 0 chr2 137928510 137928815 -112759039 - AluSp SINE Alu -4 309 1 1544 271 97 45 chr2 137928815 137929433 -112758421 - L1MC4a LINE L1 -1876 5932 5254 2372 85 0 3 chr2 137929630 137929935 -112757919 - AluSg SINE Alu -2 308 5 1128 221 52 55 chr2 137929938 137930191 -112757663 + LTR24B LTR ERV1 131 384 -192 2331 91 10 3 chr2 137930191 137930489 -112757365 + AluSq SINE Alu 1 300 -13 1128 221 52 55 chr2 137930489 137930601 -112757253 + LTR24B LTR ERV1 384 495 -81 23 0 0 0 chr2 137931370 137931393 -112756461 + GC_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 137931604 137931627 -112756227 + AT_rich Low_complexity Low_complexity 1 23 0 2358 64 0 48 chr2 137932274 137932586 -112755268 - AluY SINE Alu -14 297 1 2237 93 33 3 chr2 137932758 137933060 -112754794 - AluSx SINE Alu -1 311 1 2183 118 6 16 chr2 137933067 137933382 -112754472 - AluSx SINE Alu 0 312 1 2138 107 0 7 chr2 137933406 137933697 -112754157 + AluY SINE Alu 3 291 -20 700 175 0 9 chr2 137933726 137933840 -112754014 - FLAM_C SINE Alu -20 123 11 2037 74 48 48 chr2 137934086 137934395 -112753459 - AluY SINE Alu -2 309 1 2207 95 11 3 chr2 137934397 137934682 -112753172 - AluSg SINE Alu -23 287 1 2087 68 78 30 chr2 137934687 137934983 -112752871 - AluY SINE Alu -1 310 1 2446 80 3 3 chr2 137935168 137935468 -112752386 + AluSp SINE Alu 1 300 -13 419 250 107 75 chr2 137935754 137936166 -112751688 - L1MC5 LINE L1 -210 7751 7327 2024 145 0 0 chr2 137936174 137936470 -112751384 - AluSx SINE Alu -16 296 1 668 179 41 0 chr2 137936551 137936696 -112751158 - L1M4 LINE L1 -437 5747 5597 2203 107 0 10 chr2 137936956 137937247 -112750607 - AluSx SINE Alu -24 288 1 2689 20 7 3 chr2 137937348 137937650 -112750204 - AluY SINE Alu -8 303 1 1088 187 79 5 chr2 137937821 137938024 -112749830 - AluJo SINE Alu -14 298 81 613 259 70 30 chr2 137938438 137938639 -112749215 - MER3 DNA MER1_type 0 209 1 198 252 24 150 chr2 137938983 137939110 -112748744 - L2 LINE L2 -28 3285 3175 654 182 118 0 chr2 137939143 137939253 -112748601 - FLAM_C SINE Alu -10 123 1 701 31 20 51 chr2 137939256 137939354 -112748500 - L1MC1 LINE L1 -5 6328 6234 1188 205 128 4 chr2 137939433 137939691 -112748163 + AluJb SINE Alu 15 304 -8 1647 171 0 35 chr2 137939939 137940225 -112747629 + AluJb SINE Alu 6 281 -31 2057 73 8 0 chr2 137940262 137940510 -112747344 + AluSc SINE Alu 29 278 -31 405 0 0 0 chr2 137940514 137940559 -112747295 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 395 246 112 72 chr2 137940592 137940868 -112746986 - L1ME4a LINE L1 -101 6020 5734 2151 118 0 20 chr2 137940885 137941044 -112746810 - AluSx SINE Alu -22 290 129 240 59 0 0 chr2 137941044 137941078 -112746776 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2141 121 0 0 chr2 137941078 137941360 -112746494 - AluSc SINE Alu -27 282 1 2151 118 0 20 chr2 137941360 137941495 -112746359 - AluSx SINE Alu -181 131 1 304 247 77 53 chr2 137941936 137942106 -112745748 - MLT1K LTR MaLR -30 558 385 724 324 120 23 chr2 137942495 137943104 -112744750 + L1MEd LINE L1 12 679 -5440 2365 75 7 10 chr2 137943464 137943756 -112744098 + AluY SINE Alu 1 291 -20 1737 128 83 0 chr2 137943800 137944065 -112743789 - AluSx SINE Alu -12 300 14 437 131 0 0 chr2 137944102 137944163 -112743691 + AluSc SINE Alu 234 294 -15 346 271 79 30 chr2 137944197 137944302 -112743552 - L1MEc LINE L1 -4579 2559 2461 2278 108 0 0 chr2 137944302 137944599 -112743255 - AluSq SINE Alu -16 297 1 346 271 79 30 chr2 137944599 137944696 -112743158 - L1MEc LINE L1 -4677 2461 2347 831 223 114 67 chr2 137944703 137944941 -112742913 - MLT1C LTR MaLR -8 459 195 2139 91 34 27 chr2 137944941 137945238 -112742616 - AluSx SINE Alu -13 299 1 831 223 114 67 chr2 137945238 137945375 -112742479 - MLT1C LTR MaLR -272 195 66 1861 141 27 20 chr2 137945430 137945727 -112742127 - AluJo SINE Alu -13 299 1 233 333 133 0 chr2 137945814 137945964 -112741890 - L1MEc LINE L1 -4842 2013 1844 319 322 76 43 chr2 137946137 137946348 -112741506 - L1MEc LINE L1 -5311 1548 1331 770 246 162 60 chr2 137947164 137947566 -112740288 - L1MC4a LINE L1 -1954 5854 5412 339 281 158 0 chr2 137947605 137947751 -112740103 - L1MC4a LINE L1 -833 5313 5145 2313 62 41 14 chr2 137947762 137948054 -112739800 - AluY SINE Alu -11 300 1 2398 74 20 0 chr2 137948646 137948942 -112738912 + AluY SINE Alu 1 302 -9 2309 102 0 0 chr2 137950007 137950302 -112737552 + AluSc SINE Alu 1 295 -14 939 215 60 15 chr2 137950676 137950983 -112736871 - MSTD LTR MaLR 0 396 19 2124 114 0 0 chr2 137951041 137951338 -112736516 + AluSx SINE Alu 1 297 -15 2111 90 33 13 chr2 137951677 137951976 -112735878 + AluSq SINE Alu 1 305 -8 2113 132 0 3 chr2 137952010 137952321 -112735533 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr2 137952946 137952974 -112734880 + AT_rich Low_complexity Low_complexity 1 28 0 2010 214 77 30 chr2 137953663 137954277 -112733577 - L1ME1 LINE L1 -311 5855 5271 2221 91 0 0 chr2 137954277 137954573 -112733281 + AluSg SINE Alu 1 296 -14 2010 214 77 30 chr2 137954573 137954641 -112733213 - L1ME1 LINE L1 -895 5271 5208 2262 97 0 0 chr2 137954641 137954949 -112732905 + AluY SINE Alu 1 308 -3 2010 214 77 30 chr2 137954949 137955102 -112732752 - L1ME1 LINE L1 -958 5208 4932 1964 130 3 3 chr2 137955408 137955700 -112732154 - AluJb SINE Alu -20 292 1 311 323 38 32 chr2 137955793 137955951 -112731903 - Charlie8 DNA MER1_type -2133 284 126 2035 138 0 7 chr2 137955973 137956277 -112731577 + AluSx SINE Alu 1 302 -10 481 297 61 18 chr2 137956383 137956548 -112731306 - AluSg/x SINE Alu -19 291 120 210 128 0 0 chr2 137956671 137956710 -112731144 + (TG)n Simple_repeat Simple_repeat 1 39 0 1222 213 84 8 chr2 137956712 137956975 -112730879 - AluJo SINE Alu -29 283 1 2514 81 93 0 chr2 137957253 137957586 -112730268 + THE1B LTR MaLR 1 364 0 2390 53 0 47 chr2 137957959 137958280 -112729574 + AluY SINE Alu 1 306 -5 480 190 127 14 chr2 137958335 137958477 -112729377 + L1ME LINE L1 5534 5691 -430 2135 109 3 3 chr2 137958615 137958926 -112728928 - AluSx SINE Alu 0 312 2 225 317 34 68 chr2 137959080 137959285 -112728569 - HAL1 LINE L1 -11 2496 2299 1195 290 117 20 chr2 137959438 137960086 -112727768 - HAL1 LINE L1 -428 2079 1369 25 83 0 0 chr2 137960105 137960165 -112727689 + AT_rich Low_complexity Low_complexity 1 60 0 40 49 0 0 chr2 137960587 137960648 -112727206 + AT_rich Low_complexity Low_complexity 1 61 0 1510 191 14 14 chr2 137960649 137960937 -112726917 - AluJo SINE Alu -24 288 1 301 221 52 13 chr2 137961151 137961228 -112726626 - L1MD3 LINE L1 0 7995 7916 27 0 0 0 chr2 137961248 137961275 -112726579 + AT_rich Low_complexity Low_complexity 1 27 0 2196 100 3 3 chr2 137961686 137961987 -112725867 + AluSx SINE Alu 1 301 -11 2033 133 0 3 chr2 137962626 137962935 -112724919 - AluSx SINE Alu -4 308 1 793 141 7 22 chr2 137963126 137963261 -112724593 - FLAM_C SINE Alu 0 133 1 262 296 37 28 chr2 137963271 137963283 -112724571 - L1MC4 LINE L1 -8 8034 8024 2326 72 0 0 chr2 137963283 137963576 -112724278 + AluY SINE Alu 1 293 -18 262 296 37 28 chr2 137963576 137963671 -112724183 - L1MC4 LINE L1 -18 8024 7926 2090 88 10 27 chr2 137964110 137964406 -112723448 + AluSg SINE Alu 1 291 -19 569 211 152 19 chr2 137964448 137964704 -112723150 - L1MC5 LINE L1 -86 7875 7586 328 270 30 0 chr2 137965543 137965643 -112722211 - L1MA10 LINE L1 -5 6329 6227 505 179 105 0 chr2 137966118 137966213 -112721641 + L1PB4 LINE L1 6029 6133 -23 1915 143 0 3 chr2 137966315 137966608 -112721246 + AluSx SINE Alu 14 305 -7 548 208 28 0 chr2 137966670 137966776 -112721078 - AluJb SINE Alu -11 301 193 1351 228 173 13 chr2 137966799 137967268 -112720586 - L1ME2 LINE L1 0 6164 5621 1069 273 99 14 chr2 137967382 137967807 -112720047 - L1ME2 LINE L1 -9 6155 5695 362 277 258 27 chr2 137967811 137968187 -112719667 - HAL1 LINE L1 -2020 487 25 461 300 120 32 chr2 137968215 137968465 -112719389 - L1ME LINE L1 -338 5783 5512 1848 126 0 47 chr2 137970185 137970503 -112717351 - AluSx SINE Alu 0 312 10 1664 181 6 34 chr2 137970518 137970839 -112717015 - AluJo SINE Alu 0 312 1 1281 184 148 0 chr2 137970839 137970961 -112716893 - L1MB3 LINE L1 -41 6142 6021 300 296 96 31 chr2 137970961 137971252 -112716602 - L1MC3 LINE L1 -1814 5971 5662 1031 200 88 11 chr2 137981181 137981466 -112706388 + MER33 DNA MER1_type 18 324 0 364 234 11 11 chr2 137981766 137981860 -112705994 - MER5A DNA MER1_type -59 130 37 600 259 126 55 chr2 137986170 137986669 -112701185 + LTR50 LTR ERVL 152 780 -15 31 26 0 0 chr2 137989297 137989335 -112698519 + GC_rich Low_complexity Low_complexity 1 38 0 28 0 0 0 chr2 137989533 137989561 -112698293 + GC_rich Low_complexity Low_complexity 1 28 0 255 273 9 82 chr2 137989824 137989934 -112697920 - MIR SINE MIR -117 145 44 226 383 12 6 chr2 137990430 137990597 -112697257 + (TG)n Simple_repeat Simple_repeat 1 168 0 1980 149 0 3 chr2 137991284 137991592 -112696262 + AluJb SINE Alu 5 311 -1 180 250 146 0 chr2 137992909 137993005 -112694849 + L2 LINE L2 3201 3310 -3 2255 97 0 10 chr2 137994580 137994888 -112692966 + AluSq SINE Alu 1 305 -8 2175 95 10 0 chr2 137995059 137995355 -112692499 - AluSq SINE Alu -14 299 1 244 327 70 6 chr2 137997183 137997339 -112690515 - L1ME LINE L1 -329 5841 5676 681 215 68 6 chr2 137997365 137997528 -112690326 - MER106A DNA MER1_type 0 236 64 848 273 69 44 chr2 137997645 137997897 -112689957 - L1ME LINE L1 -623 5539 5295 189 74 0 0 chr2 137997897 137997924 -112689930 + (TATG)n Simple_repeat Simple_repeat 2 28 0 848 273 69 44 chr2 137997924 137998377 -112689477 - L1ME LINE L1 -867 5295 4815 476 193 17 122 chr2 137998380 137998560 -112689294 + MLT1E2 LTR MaLR 1 162 -343 201 215 0 92 chr2 137998699 137998764 -112689090 + L2 LINE L2 3136 3194 -78 2119 117 174 11 chr2 137999025 137999392 -112688462 + MSTA LTR MaLR 2 428 0 690 237 39 71 chr2 137999510 137999818 -112688036 - L1MC5 LINE L1 -32 7929 7632 2014 117 0 3 chr2 137999862 138000144 -112687710 + AluSg SINE Alu 4 284 -26 216 0 0 0 chr2 138000158 138000182 -112687672 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 427 290 35 7 chr2 138000186 138000331 -112687523 - L1MD2 LINE L1 -17 6342 6194 476 230 18 0 chr2 138000395 138000508 -112687346 - L1MD2 LINE L1 -452 5907 5793 809 321 44 31 chr2 138200628 138201179 -112486675 - L1M3de LINE L1 -5389 1264 360 2062 252 33 24 chr2 138201180 138201819 -112486035 - L1M4c LINE L1 -4648 1998 1354 1102 216 41 12 chr2 138201883 138202128 -112485726 - AluJo SINE Alu -21 291 40 841 221 147 17 chr2 138202128 138202476 -112485378 - L1M4c LINE L1 -5205 1337 945 32 67 0 0 chr2 138202808 138202868 -112484986 + AT_rich Low_complexity Low_complexity 1 60 0 257 305 152 9 chr2 138203386 138203491 -112484363 + L2 LINE L2 3192 3311 -2 24 0 0 0 chr2 138203753 138203777 -112484077 + AT_rich Low_complexity Low_complexity 1 24 0 11658 228 39 48 chr2 138203989 138209468 -112478386 + L1PB4 LINE L1 11 5663 -1342 1467 132 18 0 chr2 138209468 138209695 -112478159 + AluSq SINE Alu 76 306 -7 11658 228 39 48 chr2 138209695 138211026 -112476828 + L1PB4 LINE L1 5663 7005 0 2280 98 0 16 chr2 138212886 138213201 -112474653 + AluY SINE Alu 1 310 -1 2219 78 0 63 chr2 138214700 138215031 -112472823 + AluY SINE Alu 1 310 -1 432 196 137 0 chr2 138215324 138215455 -112472399 + FLAM_C SINE Alu 2 146 0 409 100 14 0 chr2 138216178 138216248 -112471606 - L1MA7 LINE L1 -8 6283 6213 297 51 0 0 chr2 138216363 138216402 -112471452 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr2 138217048 138217069 -112470785 + AT_rich Low_complexity Low_complexity 1 21 0 189 74 0 0 chr2 138217765 138217792 -112470062 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr2 138217839 138217862 -112469992 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr2 138220888 138220914 -112466940 + (CGGGG)n Simple_repeat Simple_repeat 4 29 0 1844 134 4 0 chr2 138220921 138221196 -112466658 - AluSg SINE Alu -34 276 1 391 262 140 28 chr2 138221384 138221598 -112466256 - L1M4 LINE L1 -2967 3179 2942 291 300 154 0 chr2 138221937 138222047 -112465807 - L2 LINE L2 0 3313 3187 618 283 29 113 chr2 138222062 138222479 -112465375 + LTR33A LTR ERVL 80 461 -62 368 281 212 34 chr2 138223055 138223347 -112464507 - MLT1L LTR MaLR -14 601 258 1642 125 0 4 chr2 138223359 138223643 -112464211 + AluSc SINE Alu 42 324 0 583 319 27 98 chr2 138224369 138224779 -112463075 - LTR67 LTR ERVL -175 382 2 925 174 18 18 chr2 138225163 138225381 -112462473 + L1MB7 LINE L1 5960 6177 -7 1184 152 25 0 chr2 138226447 138226644 -112461210 - L1PA15 LINE L1 -3 6162 5961 290 290 65 43 chr2 138227228 138227366 -112460488 - MLT1J2 LTR MaLR -27 423 283 565 258 15 8 chr2 138227429 138227567 -112460287 - MLT1J2 LTR MaLR -289 161 35 26 64 0 0 chr2 138227736 138227783 -112460071 + AT_rich Low_complexity Low_complexity 1 47 0 627 171 24 0 chr2 138228174 138228297 -112459557 + L1MD3 LINE L1 7870 7995 0 236 407 101 20 chr2 138228895 138229094 -112458760 + L2 LINE L2 3056 3270 -2 2022 133 72 20 chr2 138230449 138230795 -112457059 + THE1B LTR MaLR 1 364 0 2113 132 48 25 chr2 138231569 138231925 -112455929 - THE1B LTR MaLR 0 364 1 24 32 0 0 chr2 138232176 138232207 -112455647 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 138233044 138233065 -112454789 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr2 138233142 138233174 -112454680 + AT_rich Low_complexity Low_complexity 1 32 0 1559 257 137 75 chr2 138233675 138234862 -112452992 + HAL1 LINE L1 4 1263 -1244 1414 211 0 57 chr2 138234867 138235198 -112452656 + AluJo SINE Alu 1 312 0 1499 221 36 71 chr2 138235306 138235827 -112452027 - MLT1D LTR MaLR -2 503 1 889 306 57 17 chr2 138235977 138236431 -112451423 - L2 LINE L2 -129 3184 2700 3269 268 51 16 chr2 138236438 138237530 -112450324 + L1MEc LINE L1 39 1169 -5227 3538 140 0 2 chr2 138237550 138238136 -112449718 - L1P LINE L1 -4299 1847 1263 2265 81 0 0 chr2 138238333 138238672 -112449182 - AluY SINE Alu 0 339 1 543 260 154 18 chr2 138238711 138239071 -112448783 - MLT1J2 LTR MaLR -3 447 8 185 279 51 25 chr2 138239465 138239544 -112448310 + MIR SINE MIR 113 193 -69 1159 186 4 9 chr2 138240609 138240883 -112446971 + L1PB4 LINE L1 5915 6187 0 430 296 24 16 chr2 138241073 138241198 -112446656 - MIR SINE MIR -88 174 49 236 250 62 62 chr2 138241484 138241596 -112446258 - L2 LINE L2 -187 3085 2974 301 361 83 22 chr2 138241709 138242069 -112445785 - L2 LINE L2 -337 2977 2596 721 277 99 49 chr2 138242628 138243101 -112444753 + L1MD2 LINE L1 773 1269 -5140 * 2558 261 51 32 chr2 138243085 138244150 -112443704 + L1MD2 LINE L1 5308 6397 -222 243 322 161 35 chr2 138244269 138244555 -112443299 - L2 LINE L2 -829 2485 2164 24 53 0 0 chr2 138245086 138245124 -112442730 + AT_rich Low_complexity Low_complexity 1 38 0 180 375 34 11 chr2 138245190 138245278 -112442576 + L2 LINE L2 2717 2806 -508 2020 126 0 0 chr2 138245895 138246173 -112441681 + AluSx SINE Alu 1 278 -34 1710 179 105 10 chr2 138246202 138246593 -112441261 - MSTA LTR MaLR 0 428 1 195 346 65 54 chr2 138247002 138247187 -112440667 + MIR SINE MIR 34 220 -42 26 0 0 0 chr2 138247237 138247263 -112440591 + AT_rich Low_complexity Low_complexity 1 26 0 27 0 0 0 chr2 138248004 138248031 -112439823 + AT_rich Low_complexity Low_complexity 1 27 0 188 270 0 16 chr2 138248591 138248654 -112439200 - L2 LINE L2 -98 3215 3154 24 0 0 0 chr2 138248770 138248794 -112439060 + AT_rich Low_complexity Low_complexity 1 24 0 29 0 0 0 chr2 138249120 138249149 -112438705 + AT_rich Low_complexity Low_complexity 1 29 0 553 25 25 13 chr2 138249192 138249271 -112438583 + (GAAA)n Simple_repeat Simple_repeat 3 82 0 543 281 33 13 chr2 138249275 138249428 -112438426 + LTR40a LTR ERVL 244 399 -120 2178 64 0 24 chr2 138249705 138250000 -112437854 + AluY SINE Alu 17 304 -7 186 103 0 0 chr2 138251387 138251416 -112436438 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 1809 62 12 39 chr2 138251416 138251672 -112436182 - AluY SINE Alu -22 289 41 2027 132 7 0 chr2 138251672 138251967 -112435887 - AluSq SINE Alu -14 299 3 283 395 115 0 chr2 138252044 138252201 -112435653 - MIR3 SINE MIR -21 187 13 492 284 36 53 chr2 138252651 138252876 -112434978 - MIR SINE MIR -5 257 37 207 330 9 9 chr2 138252879 138252985 -112434869 + (TA)n Simple_repeat Simple_repeat 1 106 0 252 111 0 0 chr2 138253169 138253214 -112434640 + (TC)n Simple_repeat Simple_repeat 2 46 0 480 361 101 19 chr2 138253825 138254243 -112433611 + L2 LINE L2 2306 2757 -557 1028 207 18 9 chr2 138254296 138254513 -112433341 - MER20 DNA MER1_type 0 219 1 24 32 0 0 chr2 138254663 138254694 -112433160 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr2 138255681 138255706 -112432148 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 138256303 138256326 -112431528 + AT_rich Low_complexity Low_complexity 1 23 0 216 200 20 0 chr2 138256871 138256921 -112430933 + (TG)n Simple_repeat Simple_repeat 1 51 0 324 215 14 7 chr2 138256935 138257079 -112430775 + (TG)n Simple_repeat Simple_repeat 1 145 0 223 250 17 0 chr2 138257093 138257153 -112430701 + (TG)n Simple_repeat Simple_repeat 1 61 0 185 182 18 0 chr2 138257167 138257222 -112430632 + (TG)n Simple_repeat Simple_repeat 2 57 0 198 103 0 0 chr2 138257961 138257990 -112429864 + (CAG)n Simple_repeat Simple_repeat 2 30 0 376 333 82 11 chr2 138258020 138258203 -112429651 - MIR SINE MIR -46 216 21 24 39 0 0 chr2 138259121 138259147 -112428707 + AT_rich Low_complexity Low_complexity 1 26 0 270 392 144 14 chr2 138259626 138259993 -112427861 + MLT1K LTR MaLR 117 531 -57 24 32 0 0 chr2 138261020 138261051 -112426803 + AT_rich Low_complexity Low_complexity 1 31 0 557 280 147 0 chr2 138261161 138261318 -112426536 + MER5A DNA MER1_type 10 189 0 210 278 111 0 chr2 138263060 138263114 -112424740 + L2 LINE L2 3210 3269 -3 215 30 0 30 chr2 138263216 138263249 -112424605 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1465 187 71 55 chr2 138263673 138264037 -112423817 + MLT1B LTR MaLR 4 373 -17 315 0 0 0 chr2 138265349 138265384 -112422470 + (A)n Simple_repeat Simple_repeat 1 35 0 30 59 0 0 chr2 138265648 138265699 -112422155 + AT_rich Low_complexity Low_complexity 1 51 0 2458 75 0 0 chr2 138265708 138266014 -112421840 + AluY SINE Alu 1 306 -5 188 146 91 36 chr2 138266026 138266081 -112421773 - MIR SINE MIR -74 188 131 789 110 0 0 chr2 138266338 138266456 -112421398 + (TA)n Simple_repeat Simple_repeat 1 118 0 2070 98 7 0 chr2 138266458 138266755 -112421099 - AluY SINE Alu -12 299 1 2013 122 28 0 chr2 138268286 138268572 -112419282 + AluSx SINE Alu 3 296 -16 273 125 0 0 chr2 138268642 138268682 -112419172 - MSTD LTR MaLR -3 393 354 2217 156 19 34 chr2 138268729 138269140 -112418714 - Tigger2 DNA MER2_type -41 2677 2273 345 186 14 29 chr2 138269130 138269200 -112418654 - Tigger2 DNA MER2_type -2649 69 1 * 902 207 49 5 chr2 138269200 138269403 -112418451 - MSTC-int LTR MaLR -1521 214 3 944 233 96 23 chr2 138269412 138269781 -112418073 - MSTC LTR MaLR -6 422 1 558 347 0 31 chr2 138270794 138270990 -112416864 - MIR SINE MIR -26 236 47 631 229 0 0 chr2 138271220 138271342 -112416512 - MLT1A1 LTR MaLR 0 365 244 1522 76 0 5 chr2 138271439 138271650 -112416204 - L1PA8A LINE L1 -28 6103 5894 942 239 34 5 chr2 138271663 138271872 -112415982 - MLT1A1 LTR MaLR -150 215 1 27 49 0 0 chr2 138272308 138272349 -112415505 + AT_rich Low_complexity Low_complexity 1 41 0 23 33 0 0 chr2 138272379 138272409 -112415445 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 138272597 138272619 -112415235 + AT_rich Low_complexity Low_complexity 1 22 0 276 278 155 52 chr2 138272838 138273032 -112414822 - MLT1K LTR MaLR -2 586 373 2319 236 35 10 chr2 138273135 138273648 -112414206 + L1MA4A LINE L1 921 1446 -5403 * 13365 187 29 27 chr2 138273641 138276466 -112411388 + L1MA4A LINE L1 2839 5676 -1329 2056 105 3 68 chr2 138276466 138276789 -112411065 + AluSx SINE Alu 3 304 -8 13365 187 29 27 chr2 138276789 138278116 -112409738 + L1MA4A LINE L1 5676 6999 -6 337 292 34 0 chr2 138279632 138279721 -112408133 + MIR SINE MIR 94 185 -77 1898 166 70 8 chr2 138280395 138280781 -112407073 - MSTA LTR MaLR -18 410 1 24 0 0 0 chr2 138280933 138280957 -112406897 + AT_rich Low_complexity Low_complexity 1 24 0 1496 222 8 22 chr2 138281010 138281380 -112406474 - MLT1A1 LTR MaLR 0 365 1 270 208 26 52 chr2 138281385 138281462 -112406392 - MER5B DNA MER1_type -18 160 86 243 272 68 10 chr2 138281912 138282015 -112405839 - MIR SINE MIR -72 190 82 2294 100 3 0 chr2 138282292 138282592 -112405262 - AluSq SINE Alu -12 301 1 962 249 155 45 chr2 138282592 138283017 -112404837 - MER77 LTR ERV1 -80 525 54 209 282 136 39 chr2 138283077 138283180 -112404674 - L2 LINE L2 0 3313 3201 2022 175 3 0 chr2 138283218 138283558 -112404296 - MER7A DNA MER2_type -1 345 7 1167 125 0 0 chr2 138283828 138284017 -112403837 - L1PA16 LINE L1 -534 5622 5434 3371 122 26 0 chr2 138284017 138284548 -112403306 + L1PA16 LINE L1 5612 6157 -9 294 257 53 71 chr2 138284624 138284737 -112403117 - L2 LINE L2 -12 3301 3191 492 320 44 11 chr2 138284769 138284950 -112402904 + MIR SINE MIR 2 188 -74 302 242 77 0 chr2 138285037 138285128 -112402726 + MIR3 SINE MIR 104 201 -7 405 0 0 0 chr2 138285473 138285518 -112402336 + (TG)n Simple_repeat Simple_repeat 2 46 0 28 29 0 0 chr2 138286354 138286389 -112401465 + AT_rich Low_complexity Low_complexity 1 35 0 1457 211 40 10 chr2 138286492 138286673 -112401181 - AluJo SINE Alu 0 312 117 216 67 0 0 chr2 138286673 138286703 -112401151 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1457 211 40 10 chr2 138286703 138286824 -112401030 - AluJo SINE Alu -195 117 1 260 392 38 32 chr2 138287795 138287953 -112399901 - MIR SINE MIR -74 188 30 2529 207 55 28 chr2 138288173 138288789 -112399065 - L1MC2 LINE L1 -1 7741 6143 2189 132 6 3 chr2 138288957 138289290 -112398564 - MER1B DNA MER1_type 0 337 4 2685 32 0 0 chr2 138289377 138289688 -112398166 - AluY SINE Alu 0 311 1 225 0 0 0 chr2 138290553 138290578 -112397276 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 26 0 0 0 chr2 138290896 138290922 -112396932 + AT_rich Low_complexity Low_complexity 1 26 0 254 393 57 19 chr2 138291155 138291366 -112396488 + MIR SINE MIR 13 231 -31 2320 66 13 10 chr2 138291856 138292161 -112395693 - AluY SINE Alu -5 306 1 275 203 0 0 chr2 138293026 138293085 -112394769 + L1MB8 LINE L1 5910 5968 -210 238 326 0 0 chr2 138293356 138293442 -112394412 + L1M4 LINE L1 2499 2584 -3562 690 250 88 7 chr2 138293469 138293777 -112394077 + L1M4 LINE L1 2707 3039 -3107 1365 71 0 0 chr2 138293779 138293949 -112393905 + AluY SINE Alu 139 308 -3 552 282 50 22 chr2 138293951 138294228 -112393626 + L1M4 LINE L1 3029 3313 -2833 826 203 96 5 chr2 138294246 138294433 -112393421 - MER3 DNA MER1_type -5 204 1 1090 286 37 27 chr2 138294614 138295125 -112392729 + L1M4 LINE L1 3463 3978 -2168 2576 23 3 3 chr2 138295173 138295476 -112392378 - AluYa5 SINE Alu -8 303 1 21 0 0 0 chr2 138295481 138295502 -112392352 + AT_rich Low_complexity Low_complexity 1 21 0 2050 84 38 3 chr2 138295665 138295952 -112391902 + AluSg SINE Alu 1 297 -13 321 239 0 34 chr2 138295963 138296051 -112391803 + L1M4 LINE L1 4226 4310 -1836 1219 258 50 14 chr2 138296059 138296477 -112391377 + L1M4 LINE L1 4615 5047 -1099 1286 98 124 0 chr2 138297238 138297431 -112390423 + AluSc SINE Alu 83 299 -10 292 364 29 42 chr2 138297580 138297819 -112390035 + L2 LINE L2 2814 3049 -223 270 336 106 0 chr2 138297994 138298098 -112389756 - L2 LINE L2 -41 3231 3117 21 36 0 0 chr2 138298415 138298443 -112389411 + AT_rich Low_complexity Low_complexity 1 28 0 498 17 0 0 chr2 138298525 138298584 -112389270 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 297 361 25 13 chr2 138298804 138298962 -112388892 - MIR SINE MIR -21 241 82 423 323 52 26 chr2 138299124 138299279 -112388575 - MIR SINE MIR -102 160 2 537 89 13 0 chr2 138300499 138300578 -112387276 + MADE1 DNA Mariner 1 80 0 235 290 130 10 chr2 138301417 138301517 -112386337 - L2 LINE L2 -5 3267 3156 30 27 0 0 chr2 138302555 138302592 -112385262 + AT_rich Low_complexity Low_complexity 1 37 0 200 217 0 0 chr2 138303364 138303410 -112384444 + A-rich Low_complexity Low_complexity 1 46 0 4820 145 11 38 chr2 138303591 138304094 -112383760 + L1PA16 LINE L1 5333 5803 -363 2422 71 0 0 chr2 138304094 138304403 -112383451 + AluY SINE Alu 1 309 -2 4820 145 11 38 chr2 138304403 138304755 -112383099 + L1PA16 LINE L1 5803 6163 -3 195 129 0 0 chr2 138305109 138305140 -112382714 + (TA)n Simple_repeat Simple_repeat 1 31 0 563 261 87 63 chr2 138305141 138305317 -112382537 - HAL1 LINE L1 -20 2487 2317 1812 176 0 13 chr2 138305317 138305623 -112382231 - AluJb SINE Alu -10 302 1 563 261 87 63 chr2 138305623 138305860 -112381994 - HAL1 LINE L1 -190 2317 2064 1007 262 36 61 chr2 138305899 138306311 -112381543 - HAL1 LINE L1 -639 1868 1467 4109 210 35 10 chr2 138306319 138307720 -112380134 - L1MB8 LINE L1 -5 6242 4810 2050 146 0 0 chr2 138307720 138308022 -112379832 - AluSx SINE Alu -9 303 2 4109 210 35 10 chr2 138308022 138308041 -112379813 - L1MB8 LINE L1 -1437 4810 4793 1949 261 40 18 chr2 138308033 138309074 -112378780 - L1MB8 LINE L1 -3459 2756 1731 * 1574 284 75 32 chr2 138309101 138310062 -112377792 - L1M4c LINE L1 -4451 2687 1544 3723 200 66 39 chr2 138310081 138311138 -112376716 - L1MB3 LINE L1 -4 6179 5095 * 3951 249 46 13 chr2 138311126 138312209 -112375645 - L1M4c LINE L1 -5289 1570 452 258 278 184 67 chr2 138312277 138312500 -112375354 - HAL1 LINE L1 -2032 475 227 272 327 50 10 chr2 138312513 138312614 -112375240 + MER91C DNA MER1_type 36 140 0 388 246 70 75 chr2 138312686 138312873 -112374981 - HAL1 LINE L1 -2313 194 9 206 324 14 0 chr2 138313707 138313781 -112374073 - MIR SINE MIR -121 141 67 195 287 172 11 chr2 138313944 138314031 -112373823 - MIR SINE MIR -22 240 140 24 32 0 0 chr2 138314211 138314242 -112373612 + AT_rich Low_complexity Low_complexity 1 31 0 2227 109 0 0 chr2 138314704 138315008 -112372846 - AluY SINE Alu -7 304 1 240 350 21 10 chr2 138315037 138315134 -112372720 - MLT1J LTR MaLR -314 197 100 310 284 18 9 chr2 138315219 138315328 -112372526 + L1MC/D LINE L1 5734 5843 -1965 1864 150 3 0 chr2 138316294 138316588 -112371266 + AluSq SINE Alu 1 295 -18 2173 249 100 34 chr2 138316805 138317741 -112370113 - L1MB3 LINE L1 -1866 4280 3283 2677 243 61 64 chr2 138317805 138319695 -112368159 + L1ME1 LINE L1 4282 6162 -4 603 247 7 0 chr2 138321170 138321324 -112366530 - MIR SINE MIR -26 236 82 793 299 97 18 chr2 138321326 138321718 -112366136 - MLT1J2 LTR MaLR -27 423 1 2219 112 122 8 chr2 138322071 138322455 -112365399 - MSTA LTR MaLR 0 428 1 1851 133 54 7 chr2 138322550 138322844 -112365010 - AluSc SINE Alu 0 309 2 279 353 87 28 chr2 138323800 138324339 -112363515 + L2 LINE L2 1812 2382 -932 778 269 104 18 chr2 138325153 138325480 -112362374 - L2 LINE L2 -1692 1622 1268 25 31 0 0 chr2 138325553 138325585 -112362269 + AT_rich Low_complexity Low_complexity 1 32 0 278 329 120 0 chr2 138327391 138327549 -112360305 - MIR3 SINE MIR -14 194 18 236 188 0 21 chr2 138327741 138327789 -112360065 + Charlie8 DNA MER1_type 87 133 -2284 252 222 0 0 chr2 138328731 138328776 -112359078 - LTR16C LTR ERVL -2 489 445 201 182 0 0 chr2 138328808 138328841 -112359013 + T-rich Low_complexity Low_complexity 1 33 0 1335 253 82 27 chr2 138330206 138330811 -112357043 - MER21B LTR ERV1 -79 784 98 457 245 0 10 chr2 138330849 138330947 -112356907 - MER21B LTR ERV1 -766 97 1 1778 164 21 0 chr2 138331443 138331730 -112356124 - AluSx SINE Alu -15 297 5 214 326 51 20 chr2 138332724 138332822 -112355032 + L2 LINE L2 3211 3311 -2 1124 142 0 0 chr2 138332961 138333123 -112354731 - AluSx SINE Alu -150 162 1 213 39 0 0 chr2 138334042 138334068 -112353786 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 2033 128 0 20 chr2 138334068 138334366 -112353488 - AluSx SINE Alu -20 292 1 654 311 47 74 chr2 138334419 138335126 -112352728 + L2 LINE L2 2581 3304 -9 255 203 51 0 chr2 138335126 138335185 -112352669 + GA-rich Low_complexity Low_complexity 3 64 0 218 259 19 0 chr2 138337288 138337342 -112350512 - L3 LINE CR1 -3 1574 1520 1479 215 3 7 chr2 138337540 138337842 -112350012 - AluJo SINE Alu -6 306 6 227 73 49 0 chr2 138337889 138337930 -112349924 + A-rich Low_complexity Low_complexity 6 48 0 189 320 0 0 chr2 138339334 138339384 -112348470 + L2 LINE L2 3216 3265 -7 21 0 0 0 chr2 138341158 138341179 -112346675 + AT_rich Low_complexity Low_complexity 1 21 0 2024 296 128 38 chr2 138341249 138342295 -112345559 + L2 LINE L2 1350 2489 -825 734 270 100 25 chr2 138342329 138342570 -112345284 + L2 LINE L2 3053 3311 -2 879 123 0 55 chr2 138343547 138343693 -112344161 + FLAM_C SINE Alu 6 143 0 1086 180 31 28 chr2 138344464 138344719 -112343135 - L1MA8 LINE L1 -171 6120 5865 830 152 37 6 chr2 138344719 138344881 -112342973 + L1MA8 LINE L1 6121 6289 -2 214 368 53 13 chr2 138345016 138345168 -112342686 + L2 LINE L2 2692 2849 -465 283 320 31 0 chr2 138345233 138345361 -112342493 + MIR SINE MIR 131 262 0 220 367 33 40 chr2 138345427 138345577 -112342277 + L2 LINE L2 2898 3046 -226 29 0 0 0 chr2 138345783 138345812 -112342042 + AT_rich Low_complexity Low_complexity 1 29 0 2227 125 0 0 chr2 138346371 138346682 -112341172 + AluSx SINE Alu 1 311 -1 191 86 0 29 chr2 138347160 138347195 -112340659 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 279 227 106 0 chr2 138349296 138349362 -112338492 + LTR32 LTR ERVL 12 84 -387 929 172 54 59 chr2 138349431 138349652 -112338202 + LTR32 LTR ERVL 247 466 -5 1350 287 55 40 chr2 138350103 138350777 -112337077 - L2 LINE L2 -118 3195 2493 351 78 0 0 chr2 138352430 138352481 -112335373 + (CA)n Simple_repeat Simple_repeat 1 51 0 198 71 0 0 chr2 138352538 138352566 -112335288 + (CA)n Simple_repeat Simple_repeat 2 29 0 198 71 0 0 chr2 138352623 138352651 -112335203 + (CA)n Simple_repeat Simple_repeat 2 29 0 1769 142 78 0 chr2 138352843 138353124 -112334730 + AluSq SINE Alu 1 303 -10 180 0 0 0 chr2 138353992 138354012 -112333842 + (TTG)n Simple_repeat Simple_repeat 2 21 0 26 64 0 0 chr2 138354600 138354647 -112333207 + AT_rich Low_complexity Low_complexity 1 47 0 22105 168 53 27 chr2 138356060 138362247 -112325607 - L1PA10 LINE L1 -3 6480 10 4540 148 28 8 chr2 138362266 138363550 -112324304 - L1PA16 LINE L1 -16 6150 4898 1008 198 114 0 chr2 138363765 138363967 -112323887 - MSTA LTR MaLR -203 225 1 8516 180 14 35 chr2 138363967 138365648 -112322206 - MSTA-int LTR MaLR 0 1651 5 2335 149 73 0 chr2 138365652 138366049 -112321805 - MSTA LTR MaLR 0 428 3 736 112 0 9 chr2 138367030 138367146 -112320708 - MER2 DNA MER2_type -135 210 96 609 170 0 0 chr2 138367247 138367359 -112320495 - MER2 DNA MER2_type -135 210 99 3285 153 19 43 chr2 138367359 138367792 -112320062 + MER6A DNA MER2_type 1 416 -449 1177 226 82 18 chr2 138367792 138368071 -112319783 + AluJb SINE Alu 1 297 -5 3285 153 19 43 chr2 138368071 138368257 -112319597 + MER6A DNA MER2_type 416 605 0 378 220 0 80 chr2 138368257 138368357 -112319497 - MER2 DNA MER2_type -247 98 7 2236 89 6 22 chr2 138368460 138368776 -112319078 + AluY SINE Alu 1 311 0 516 282 24 44 chr2 138369200 138369498 -112318356 + AluYa5 SINE Alu 20 311 0 2190 103 10 0 chr2 138370123 138370423 -112317431 - AluSg SINE Alu -7 303 1 21 0 0 0 chr2 138370446 138370467 -112317387 + AT_rich Low_complexity Low_complexity 1 21 0 2081 147 0 0 chr2 138370475 138370787 -112317067 + AluSx SINE Alu 1 312 0 200 235 20 0 chr2 138371310 138371361 -112316493 + GA-rich Low_complexity Low_complexity 1 52 0 267 261 87 0 chr2 138371764 138371833 -112316021 + MIR SINE MIR 34 108 -100 368 237 32 45 chr2 138372117 138372246 -112315608 - MER103 DNA DNA -2 164 36 2572 112 11 8 chr2 138372246 138372620 -112315234 - THE1C LTR MaLR 0 375 1 368 237 32 45 chr2 138372620 138372646 -112315208 - MER103 DNA DNA -130 36 11 2264 84 0 34 chr2 138372856 138373178 -112314676 - AluY SINE Alu 0 311 1 2279 120 0 0 chr2 138373790 138374099 -112313755 + AluSq SINE Alu 4 312 -1 2438 50 0 20 chr2 138375159 138375462 -112312392 - AluY SINE Alu -13 298 2 267 31 0 0 chr2 138375599 138375631 -112312223 + (TG)n Simple_repeat Simple_repeat 1 32 0 24 0 0 0 chr2 138376266 138376290 -112311564 + AT_rich Low_complexity Low_complexity 1 24 0 1933 124 4 0 chr2 138376798 138377071 -112310783 - AluSg SINE Alu -2 308 35 7586 103 11 3 chr2 138377654 138378767 -112309087 - L1P LINE L1 -3081 3065 1944 1578 122 49 0 chr2 138378769 138379016 -112308838 + L1PA7 LINE L1 5890 6148 -6 4320 135 85 21 chr2 138379017 138379808 -112308046 + L1PA10 LINE L1 5323 6163 -5 27 100 0 0 chr2 138380106 138380196 -112307658 + AT_rich Low_complexity Low_complexity 1 90 0 518 262 36 149 chr2 138380900 138381262 -112306592 - L2 LINE L2 -15 3298 2978 3923 134 85 22 chr2 138381309 138382023 -112305831 - L1PA10 LINE L1 -103 6065 5307 437 316 190 0 chr2 138382161 138382335 -112305519 - L2 LINE L2 -389 2925 2719 584 305 64 28 chr2 138382671 138382953 -112304901 - L2 LINE L2 -589 2725 2434 439 274 86 38 chr2 138384007 138384193 -112303661 + L2 LINE L2 2564 2758 -556 1618 132 4 0 chr2 138384586 138384821 -112303033 - THE1B LTR MaLR -5 359 124 863 248 114 72 chr2 138384889 138385610 -112302244 + HAL1 LINE L1 1757 2507 0 241 245 258 13 chr2 138385786 138385941 -112301913 + L2 LINE L2 2954 3146 -167 2040 186 50 14 chr2 138386257 138386776 -112301078 - MLT1F LTR MaLR -6 536 1 455 321 91 47 chr2 138387116 138387434 -112300420 + MER102b DNA MER1_type 10 341 0 945 225 34 28 chr2 138387485 138387785 -112300069 - LTR37B LTR ERV1 0 468 138 406 214 0 11 chr2 138387865 138387954 -112299900 - LTR37B LTR ERV1 -328 140 53 24 0 0 0 chr2 138387966 138387990 -112299864 + AT_rich Low_complexity Low_complexity 1 24 0 4256 110 31 16 chr2 138388021 138388695 -112299159 - L1PA14 LINE L1 0 6161 5478 22 35 0 0 chr2 138390099 138390128 -112297726 + AT_rich Low_complexity Low_complexity 1 29 0 799 234 59 61 chr2 138390423 138390849 -112297005 - MER34 LTR ERV1 -2 644 77 345 235 153 0 chr2 138390860 138390958 -112296896 - MER34 LTR ERV1 -417 125 13 1054 252 44 3 chr2 138391020 138391361 -112296493 - LTR37B LTR ERV1 0 468 114 504 188 171 100 chr2 138391381 138391883 -112295971 - LTR48 LTR ERV1 -1 786 163 245 133 0 44 chr2 138391919 138391964 -112295890 - LTR48B LTR ERV1 -601 43 1 * 644 207 90 58 chr2 138391964 138392115 -112295739 - MER3 DNA MER1_type -17 192 32 2642 129 26 2 chr2 138392115 138392542 -112295312 - LTR23 LTR ERV1 0 437 1 644 207 90 58 chr2 138392542 138392575 -112295279 - MER3 DNA MER1_type -177 32 2 410 211 8 49 chr2 138392575 138392694 -112295160 - LTR37B LTR ERV1 -347 121 8 2013 136 3 3 chr2 138395663 138395965 -112291889 - AluSx SINE Alu -9 303 2 216 196 0 0 chr2 138396042 138396088 -112291766 + T-rich Low_complexity Low_complexity 3 48 0 210 294 212 0 chr2 138396359 138396444 -112291410 - L3 LINE CR1 -17 1560 1458 616 270 80 10 chr2 138396447 138396647 -112291207 + MIR SINE MIR 12 225 -37 1253 203 56 63 chr2 138397004 138397399 -112290455 - MER39 LTR ERV1 -25 682 291 247 210 32 32 chr2 138400605 138400667 -112287187 - MLT1L LTR MaLR -361 254 193 183 80 0 0 chr2 138401852 138401877 -112285977 + (A)n Simple_repeat Simple_repeat 1 25 0 186 71 0 0 chr2 138402067 138402095 -112285759 + (TGG)n Simple_repeat Simple_repeat 1 28 0 27 100 0 0 chr2 138402623 138402713 -112285141 + AT_rich Low_complexity Low_complexity 1 90 0 463 287 96 43 chr2 138402774 138403004 -112284850 - MLT1J2 LTR MaLR -4 446 205 243 231 99 33 chr2 138404668 138404759 -112283095 - MLT1J2 LTR MaLR -296 154 58 21 57 0 0 chr2 138404857 138404892 -112282962 + AT_rich Low_complexity Low_complexity 1 35 0 1651 148 167 34 chr2 138405113 138405491 -112282363 - MSTA LTR MaLR 0 428 1 8443 155 42 37 chr2 138405491 138407054 -112280800 - MSTA-int LTR MaLR 0 1580 1 1388 194 205 14 chr2 138407060 138407416 -112280438 - MSTA LTR MaLR -4 424 1 356 282 64 64 chr2 138407847 138408035 -112279819 - MLT1L LTR MaLR -8 607 420 22 0 0 0 chr2 138408693 138408715 -112279139 + AT_rich Low_complexity Low_complexity 1 22 0 512 355 61 4 chr2 138409866 138410097 -112277757 - MIR SINE MIR -15 247 4 2030 181 19 14 chr2 138410333 138410752 -112277102 + L1MC2 LINE L1 5917 6337 -7 195 42 0 0 chr2 138411937 138411961 -112275893 + (T)n Simple_repeat Simple_repeat 1 24 0 1961 148 0 0 chr2 138412438 138412758 -112275096 - AluSx SINE Alu 0 320 1 680 254 36 40 chr2 138412840 138413064 -112274790 - MIR SINE MIR -15 247 25 23 0 0 0 chr2 138413093 138413116 -112274738 + AT_rich Low_complexity Low_complexity 1 23 0 283 304 83 40 chr2 138413800 138413993 -112273861 + MIR SINE MIR 5 213 -49 423 242 66 0 chr2 138414409 138414500 -112273354 + U6 snRNA snRNA 6 102 -5 22 0 0 0 chr2 138414501 138414523 -112273331 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 138414687 138414709 -112273145 + AT_rich Low_complexity Low_complexity 1 22 0 1970 117 7 3 chr2 138415067 138415374 -112272480 + L1MA3 LINE L1 5997 6304 -1 183 348 13 80 chr2 138415560 138415784 -112272070 - L2 LINE L2 -546 2768 2560 201 262 0 0 chr2 138416536 138416578 -112271276 + L3 LINE CR1 1531 1572 -5 1966 130 75 26 chr2 138417904 138418251 -112269603 - THE1B LTR MaLR 0 364 1 730 253 6 6 chr2 138419117 138419291 -112268563 - LTR40a LTR ERVL 0 519 346 345 255 85 93 chr2 138419344 138419591 -112268263 - HERVL40 LTR ERVL -766 2271 2027 * 396 275 113 14 chr2 138419589 138419731 -112268123 - HERVL40 LTR ERVL -1248 4282 4127 1311 267 80 29 chr2 138419758 138420234 -112267620 - LTR40a LTR ERVL -19 500 1 2475 270 63 22 chr2 138420671 138421620 -112266234 - L1MD2 LINE L1 -10 6349 5362 2264 77 15 31 chr2 138421628 138421953 -112265901 - L1PA8A LINE L1 -6 6125 5806 791 173 0 0 chr2 138422228 138422361 -112265493 + FLAM_A SINE Alu 1 133 0 21 0 0 0 chr2 138424623 138424644 -112263210 + AT_rich Low_complexity Low_complexity 1 21 0 1787 145 31 3 chr2 138425122 138425412 -112262442 - AluSx SINE Alu -14 298 1 23 54 0 0 chr2 138425897 138425934 -112261920 + AT_rich Low_complexity Low_complexity 1 37 0 723 24 0 0 chr2 138426175 138426302 -112261552 + L1PA8 LINE L1 6067 6193 0 21 57 0 0 chr2 138426496 138426531 -112261323 + AT_rich Low_complexity Low_complexity 1 35 0 505 57 71 39 chr2 138428112 138428542 -112259312 + (TA)n Simple_repeat Simple_repeat 1 443 0 21 0 0 0 chr2 138428878 138428899 -112258955 + AT_rich Low_complexity Low_complexity 1 21 0 289 261 144 18 chr2 138429451 138429562 -112258292 - MIR SINE MIR -32 230 106 31 44 0 0 chr2 138429778 138429823 -112258031 + AT_rich Low_complexity Low_complexity 1 45 0 644 309 88 31 chr2 138430368 138430685 -112257169 + MLT1I LTR MaLR 74 408 -1 405 0 0 0 chr2 138430844 138430889 -112256965 + (CA)n Simple_repeat Simple_repeat 2 46 0 221 0 35 0 chr2 138432544 138432573 -112255281 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 226 57 29 0 chr2 138432680 138432715 -112255139 + Alu SINE Alu 232 267 -35 1549 114 0 4 chr2 138432715 138432952 -112254902 - AluY SINE Alu -75 236 1 1495 284 93 31 chr2 138433172 138433300 -112254554 - L1MC4 LINE L1 -107 7935 7816 1933 168 12 52 chr2 138433300 138433704 -112254150 + MLT1B LTR MaLR 3 390 0 1495 284 93 31 chr2 138433704 138434495 -112253359 - L1MC4 LINE L1 -226 7816 6959 369 0 0 0 chr2 138434622 138434663 -112253191 + (TG)n Simple_repeat Simple_repeat 2 42 0 365 335 92 19 chr2 138435507 138435767 -112252087 - L2 LINE L2 -14 3258 2980 280 236 34 45 chr2 138436648 138436737 -112251117 - L2 LINE L2 -16 3297 3210 870 306 33 17 chr2 138437603 138437904 -112249950 - LTR16C LTR ERVL -150 341 36 602 219 12 56 chr2 138439167 138439327 -112248527 - L2 LINE L2 -470 2844 2692 4377 165 39 5 chr2 138439428 138440208 -112247646 + MER6 DNA MER2_type 60 865 0 2785 271 101 54 chr2 138440210 138441699 -112246155 - L2 LINE L2 -707 2607 1049 1931 125 17 7 chr2 138441730 138442019 -112245835 - AluSq SINE Alu -21 292 1 27 29 0 0 chr2 138442350 138442384 -112245470 + AT_rich Low_complexity Low_complexity 1 34 0 204 293 136 68 chr2 138442403 138442550 -112245304 - MIR3 SINE MIR -9 199 43 1360 211 127 14 chr2 138442900 138443255 -112244599 + MSTD LTR MaLR 1 395 -1 24 0 0 0 chr2 138443638 138443662 -112244192 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr2 138443998 138444028 -112243826 + AT_rich Low_complexity Low_complexity 1 30 0 1417 113 5 0 chr2 138444309 138444512 -112243342 + AluSx SINE Alu 1 204 -108 414 154 0 0 chr2 138444554 138444619 -112243235 + AluSx SINE Alu 201 265 -44 483 48 0 0 chr2 138444624 138444686 -112243168 + (GA)n Simple_repeat Simple_repeat 1 62 0 1145 150 5 20 chr2 138445085 138445285 -112242569 - AluSx SINE Alu -115 197 1 1735 196 35 18 chr2 138445978 138446320 -112241534 - MER7A DNA MER2_type 0 346 1 22 0 0 0 chr2 138446555 138446577 -112241277 + AT_rich Low_complexity Low_complexity 1 22 0 423 277 93 47 chr2 138446773 138447162 -112240692 - LTR33 LTR ERVL -59 464 43 2158 125 3 0 chr2 138447878 138448175 -112239679 + AluSx SINE Alu 13 310 -2 2184 108 3 0 chr2 138448259 138448554 -112239300 + AluSq SINE Alu 3 298 -15 21 71 0 0 chr2 138448837 138448879 -112238975 + AT_rich Low_complexity Low_complexity 1 42 0 225 0 0 0 chr2 138449523 138449548 -112238306 + (GA)n Simple_repeat Simple_repeat 2 26 0 207 289 19 0 chr2 138449911 138449963 -112237891 + L2 LINE L2 3214 3266 -6 21 57 0 0 chr2 138450486 138450521 -112237333 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 138450797 138450819 -112237035 + AT_rich Low_complexity Low_complexity 1 22 0 1968 107 4 0 chr2 138451527 138451790 -112236064 - AluSp SINE Alu -26 287 24 240 274 0 0 chr2 138452018 138452069 -112235785 + L2 LINE L2 3209 3259 -13 222 407 0 0 chr2 138452386 138452494 -112235360 + (CA)n Simple_repeat Simple_repeat 1 108 0 612 156 0 0 chr2 138456985 138457092 -112230762 - L1PA16 LINE L1 -182 5969 5863 242 111 0 0 chr2 138457090 138457126 -112230728 + L1PA16 LINE L1 6121 6156 -10 * 22 0 0 0 chr2 138459252 138459274 -112228580 + AT_rich Low_complexity Low_complexity 1 22 0 2107 155 31 6 chr2 138459289 138459710 -112228144 + MER84 LTR ERVI 3 505 -2 2283 110 0 0 chr2 138460195 138460495 -112227359 + AluSc SINE Alu 1 300 -9 294 29 0 0 chr2 138461160 138461195 -112226659 + (T)n Simple_repeat Simple_repeat 1 35 0 2488 80 0 3 chr2 138461316 138461630 -112226224 - AluSq SINE Alu 0 313 1 2398 176 105 42 chr2 138461808 138462381 -112225473 + LTR8A LTR ERV1 119 727 0 320 184 70 123 chr2 138463333 138463447 -112224407 - MER34 LTR ERV1 -4 538 452 22 0 0 0 chr2 138464132 138464154 -112223700 + AT_rich Low_complexity Low_complexity 1 22 0 301 177 32 0 chr2 138464329 138464391 -112223463 - MER82 DNA MER2_type 0 653 590 1704 185 78 54 chr2 138464423 138464749 -112223105 + MER61D LTR ERV1 1 399 -102 1903 118 18 4 chr2 138464749 138465079 -112222775 + AluY SINE Alu 1 334 0 1704 185 78 54 chr2 138465079 138465185 -112222669 + MER61D LTR ERV1 399 501 0 2339 214 17 63 chr2 138465196 138465785 -112222069 - MER82 DNA MER2_type -91 562 1 349 310 158 35 chr2 138465789 138466099 -112221755 + L1ME LINE L1 5382 5729 -392 31 26 0 0 chr2 138466693 138466731 -112221123 + AT_rich Low_complexity Low_complexity 1 38 0 2138 183 106 35 chr2 138467034 138467766 -112220088 - LTR1B LTR ERV1 0 826 3 24 0 0 0 chr2 138467859 138467883 -112219971 + AT_rich Low_complexity Low_complexity 1 24 0 2202 87 20 0 chr2 138468427 138468606 -112219248 - AluY SINE Alu -2 309 120 297 0 0 0 chr2 138468606 138468639 -112219215 + (TG)n Simple_repeat Simple_repeat 2 34 0 2202 87 20 0 chr2 138468639 138468758 -112219096 - AluY SINE Alu -191 120 5 21 0 0 0 chr2 138470216 138470237 -112217617 + AT_rich Low_complexity Low_complexity 1 21 0 264 284 53 32 chr2 138470936 138471031 -112216823 + L2 LINE L2 3180 3276 -37 277 278 71 56 chr2 138471617 138471743 -112216111 - MIR SINE MIR -16 246 119 282 29 0 0 chr2 138472697 138472732 -112215122 + (TG)n Simple_repeat Simple_repeat 2 36 0 209 266 0 85 chr2 138472734 138472828 -112215026 - L2 LINE L2 -4 3268 3183 22 56 0 0 chr2 138472958 138472994 -112214860 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 138473350 138473371 -112214483 + AT_rich Low_complexity Low_complexity 1 21 0 266 203 16 0 chr2 138473404 138473468 -112214386 + MER116 DNA Mariner 1 65 -15 535 298 55 18 chr2 138474017 138474235 -112213619 + MIR SINE MIR 24 249 -13 291 81 0 0 chr2 138474380 138474417 -112213437 - tRNA-Thr-ACA tRNA tRNA -38 38 2 8400 40 11 0 chr2 138474417 138476233 -112211621 + L1PA5 LINE L1 4328 6154 0 22 0 0 0 chr2 138476446 138476468 -112211386 + AT_rich Low_complexity Low_complexity 1 22 0 195 42 0 0 chr2 138477643 138477667 -112210187 + (A)n Simple_repeat Simple_repeat 1 24 0 1294 311 80 66 chr2 138478691 138479003 -112208851 + L2 LINE L2 104 410 -2904 2127 118 3 7 chr2 138479003 138479309 -112208545 - AluSx SINE Alu -4 308 4 1294 311 80 66 chr2 138479309 138479817 -112208037 + L2 LINE L2 410 936 -2378 2094 76 31 0 chr2 138479845 138480133 -112207721 - L1PA7 LINE L1 -1 6153 5857 3578 58 2 0 chr2 138480133 138480580 -112207274 + L1PA7 LINE L1 5408 5855 -299 272 309 249 21 chr2 138480584 138480860 -112206994 + L2 LINE L2 969 1309 -2005 317 299 28 0 chr2 138480860 138480967 -112206887 + MER5C DNA MER1_type 2 111 -213 599 242 59 13 chr2 138480972 138481125 -112206729 - FRAM SINE Alu -16 160 1 356 191 251 101 chr2 138481128 138481327 -112206527 + MER5C DNA MER1_type 96 324 0 371 252 65 24 chr2 138481403 138481526 -112206328 + L2 LINE L2 2800 2927 -387 1154 130 6 0 chr2 138481598 138481767 -112206087 - AluSp SINE Alu -11 302 133 349 318 71 0 chr2 138482573 138482771 -112205083 + L1MC/D LINE L1 4134 4345 -1801 25 0 0 0 chr2 138482941 138482966 -112204888 + AT_rich Low_complexity Low_complexity 1 25 0 25 51 0 0 chr2 138483098 138483137 -112204717 + AT_rich Low_complexity Low_complexity 1 39 0 455 319 78 40 chr2 138483275 138483698 -112204156 + L1MC/D LINE L1 5357 5795 -2013 262 0 0 0 chr2 138483690 138483720 -112204134 - L1P4 LINE L1 -591 5570 5541 * 2584 88 81 10 chr2 138483720 138484128 -112203726 + L1PA7 LINE L1 5710 6146 -8 207 0 0 0 chr2 138484386 138484409 -112203445 + (TA)n Simple_repeat Simple_repeat 1 23 0 1620 134 0 0 chr2 138484818 138485065 -112202789 - L1PB1 LINE L1 0 6151 5905 2360 177 48 5 chr2 138485118 138485554 -112202300 + MSTB2 LTR MaLR 3 457 0 702 257 37 16 chr2 138486408 138486595 -112201259 + MIR SINE MIR 72 262 0 21 57 0 0 chr2 138487791 138487826 -112200028 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 138487895 138487916 -112199938 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr2 138488123 138488174 -112199680 + AT_rich Low_complexity Low_complexity 1 51 0 252 239 33 65 chr2 138489524 138489616 -112198238 - L2 LINE L2 0 3272 3184 532 174 0 0 chr2 138490481 138490573 -112197281 - L1MA8 LINE L1 -44 6247 6156 4219 256 88 24 chr2 138490892 138492759 -112195095 + L1ME3 LINE L1 3614 5662 -500 351 0 0 0 chr2 138492759 138492798 -112195056 + (TG)n Simple_repeat Simple_repeat 2 40 0 4219 256 88 24 chr2 138492798 138493254 -112194600 + L1ME3 LINE L1 5662 6087 -75 29 0 0 0 chr2 138493292 138493321 -112194533 + AT_rich Low_complexity Low_complexity 1 29 0 1841 178 34 16 chr2 138493382 138493765 -112194089 + MLT1B LTR MaLR 1 390 0 26 50 0 0 chr2 138493823 138493863 -112193991 + AT_rich Low_complexity Low_complexity 1 40 0 529 284 140 25 chr2 138494138 138494381 -112193473 + L3b LINE CR1 1223 1493 -90 320 294 28 46 chr2 138494453 138494562 -112193292 + MIR SINE MIR 43 149 -113 270 311 48 19 chr2 138494851 138494954 -112192900 + MIR SINE MIR 36 141 -67 181 326 0 0 chr2 138495202 138495248 -112192606 - L2 LINE L2 -37 3276 3231 388 350 82 39 chr2 138495256 138495536 -112192318 - L2 LINE L2 -56 3257 2966 2005 99 10 26 chr2 138495572 138495876 -112191978 + AluSc SINE Alu 3 301 -8 870 306 33 17 chr2 138498151 138498452 -112189402 + LTR16C LTR ERVL 36 341 -150 280 236 34 45 chr2 138499318 138499407 -112188447 + L2 LINE L2 3210 3297 -16 365 335 92 19 chr2 138500288 138500548 -112187306 + L2 LINE L2 2980 3258 -14 369 0 0 0 chr2 138501392 138501433 -112186421 + (CA)n Simple_repeat Simple_repeat 2 42 0 1495 284 93 31 chr2 138501560 138502351 -112185503 + L1MC4 LINE L1 6959 7816 -226 1942 168 12 52 chr2 138502351 138502755 -112185099 - MLT1B LTR MaLR 0 390 3 1495 284 93 31 chr2 138502755 138502883 -112184971 + L1MC4 LINE L1 7816 7935 -107 2596 33 0 0 chr2 138503103 138503403 -112184451 + AluY SINE Alu 1 300 -11 734 269 45 57 chr2 138503888 138504105 -112183749 - MIR SINE MIR 0 262 47 2560 141 19 30 chr2 138504105 138504538 -112183316 - MSTC LTR MaLR 0 428 1 734 269 45 57 chr2 138504538 138504584 -112183270 - MIR SINE MIR -215 47 2 432 221 0 12 chr2 138506738 138506824 -112181030 - Tigger7 DNA MER2_type -1 2586 2502 426 274 0 0 chr2 138506825 138506920 -112180934 + MER46A DNA MER2_type 1 95 -141 648 228 0 0 chr2 138506921 138507044 -112180810 + AluJo/FLAM SINE Alu 2 124 -178 309 238 0 16 chr2 138507045 138507108 -112180746 + AluSc SINE Alu 124 185 -114 * 1066 230 49 0 chr2 138507100 138507326 -112180528 - Tigger7 DNA MER2_type -496 237 1 299 292 21 21 chr2 138507381 138507477 -112180377 + L2 LINE L2 3177 3272 0 321 23 23 0 chr2 138508206 138508250 -112179604 + MADE1 DNA Mariner 36 80 0 318 321 0 12 chr2 138509029 138509113 -112178741 + MIR SINE MIR 40 122 -86 1327 216 60 50 chr2 138510192 138510572 -112177282 - MLT2C1 LTR ERVL 0 397 14 216 86 0 0 chr2 138510768 138510803 -112177051 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1961 112 0 11 chr2 138510810 138511088 -112176766 - AluSg SINE Alu -35 275 1 569 309 11 6 chr2 138511374 138511555 -112176299 - L1MC/D LINE L1 -2072 5736 5555 250 255 0 0 chr2 138511568 138511619 -112176235 + MER5A DNA MER1_type 138 188 -1 210 123 53 0 chr2 138513406 138513463 -112174391 + (TA)n Simple_repeat Simple_repeat 1 60 0 * 264 77 0 0 chr2 138513462 138513501 -112174353 + (GA)n Simple_repeat Simple_repeat 2 40 0 189 326 105 12 chr2 138513502 138513588 -112174266 - L2 LINE L2 -27 3286 3193 1275 352 98 25 chr2 138513696 138515390 -112172464 - L2 LINE L2 -199 3073 1292 246 332 62 60 chr2 138515390 138515839 -112172015 - L2 LINE L2 -2348 966 517 15157 28 2 0 chr2 138516034 138517860 -112169994 - L1P LINE L1 -1490 4656 2828 3350 28 0 0 chr2 138517860 138518251 -112169603 + L1PA3 LINE L1 5763 6155 0 2810 172 16 71 chr2 138519230 138519876 -112167978 + LTR9 LTR ERV1 3 612 0 1329 242 86 49 chr2 138522409 138522958 -112164896 + L1MC4 LINE L1 7459 8027 -15 212 233 0 0 chr2 138524393 138524436 -112163418 + GA-rich Low_complexity Low_complexity 2 44 0 2736 294 151 19 chr2 138529911 138530248 -112157606 - L2 LINE L2 0 3313 3022 2155 123 54 14 chr2 138530248 138530598 -112157256 - THE1B LTR MaLR 0 364 1 2736 294 151 19 chr2 138530598 138531831 -112156023 - L2 LINE L2 -291 3022 1540 315 0 0 0 chr2 138532213 138532248 -112155606 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr2 138532281 138532303 -112155551 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 138533533 138533557 -112154297 + AT_rich Low_complexity Low_complexity 1 24 0 309 183 0 0 chr2 138534203 138534263 -112153591 + (CATA)n Simple_repeat Simple_repeat 4 63 0 1325 189 0 0 chr2 138535116 138535349 -112152505 + AluJb SINE Alu 4 236 -76 408 317 0 0 chr2 138535516 138535661 -112152193 + L1ME4a LINE L1 5711 5855 -266 23 33 0 0 chr2 138535788 138535818 -112152036 + AT_rich Low_complexity Low_complexity 1 30 0 298 222 37 0 chr2 138536170 138536251 -112151603 + L1ME3A LINE L1 5787 5870 -300 24 32 0 0 chr2 138536485 138536516 -112151338 + AT_rich Low_complexity Low_complexity 1 31 0 4557 89 14 0 chr2 138536516 138537443 -112150411 - L1PA8 LINE L1 -272 5900 4965 1853 77 7 25 chr2 138537446 138537720 -112150134 + L1PA8 LINE L1 5898 6166 -6 35 63 0 0 chr2 138537818 138537881 -112149973 + AT_rich Low_complexity Low_complexity 1 63 0 297 0 0 0 chr2 138540963 138540996 -112146858 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1786 133 0 0 chr2 138541002 138541251 -112146603 - AluSx SINE Alu -63 249 1 339 259 134 73 chr2 138542275 138542522 -112145332 - L2 LINE L2 -5 3308 3047 32 0 0 0 chr2 138542592 138542624 -112145230 + AT_rich Low_complexity Low_complexity 1 32 0 3263 29 0 0 chr2 138542628 138543014 -112144840 - L1PA2 LINE L1 -12 6143 5758 7474 23 1 0 chr2 138543204 138544776 -112143078 - L1PA2 LINE L1 -1 6154 4579 1585 164 0 52 chr2 138545357 138545702 -112142152 - AluJb SINE Alu 0 312 23 695 273 43 0 chr2 138545871 138546058 -112141796 - MIR SINE MIR 0 262 68 1583 273 55 18 chr2 138546063 138546558 -112141296 - LTR40a LTR ERVL 0 519 7 1481 199 69 113 chr2 138546601 138546754 -112141100 + MLT1D LTR MaLR 1 159 -346 1269 153 8 30 chr2 138546754 138547016 -112140838 - L1MA5 LINE L1 -12 6288 6033 1481 199 69 113 chr2 138547016 138547384 -112140470 + MLT1D LTR MaLR 159 499 -6 228 163 0 0 chr2 138547978 138548021 -112139833 + (CA)n Simple_repeat Simple_repeat 2 44 0 2179 240 22 15 chr2 138549133 138549667 -112138187 - MER44D DNA MER2_type 0 605 13 23 54 0 0 chr2 138549674 138549711 -112138143 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr2 138550484 138550506 -112137348 + AT_rich Low_complexity Low_complexity 1 22 0 288 200 0 0 chr2 138550714 138550784 -112137070 + (TG)n Simple_repeat Simple_repeat 1 70 0 1219 303 99 35 chr2 138551267 138551861 -112135993 - L1MCc LINE L1 -5137 1286 655 993 242 65 7 chr2 138552307 138552613 -112135241 - L1MCc LINE L1 -6064 359 36 207 0 0 0 chr2 138553259 138553282 -112134572 + (TTA)n Simple_repeat Simple_repeat 2 24 0 7355 32 10 0 chr2 138553283 138554329 -112133525 - L1PA3 LINE L1 -17 6138 5088 1395 177 46 58 chr2 138554794 138555122 -112132732 - MLT1A2 LTR MaLR -50 324 1 295 176 27 40 chr2 138555122 138555190 -112132664 + MLT1F LTR MaLR 476 542 0 500 253 76 83 chr2 138555190 138555617 -112132237 + L2 LINE L2 2656 3061 -211 240 163 0 0 chr2 138555794 138555837 -112132017 + (TA)n Simple_repeat Simple_repeat 1 43 0 357 324 156 9 chr2 138555984 138556432 -112131422 + L1ME3A LINE L1 5328 5841 -329 300 53 0 0 chr2 138557346 138557384 -112130470 + (TG)n Simple_repeat Simple_repeat 1 38 0 855 244 42 0 chr2 138558631 138558824 -112129030 + MER20 DNA MER1_type 18 218 -1 364 280 68 6 chr2 138558847 138559074 -112128780 - LTR40c LTR ERVL -54 408 173 853 312 94 12 chr2 138559468 138559882 -112127972 + L2 LINE L2 2866 3313 0 26 50 0 0 chr2 138560404 138560444 -112127410 + AT_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr2 138560506 138560530 -112127324 + AT_rich Low_complexity Low_complexity 1 24 0 626 200 95 42 chr2 138560530 138560592 -112127262 - L1MD3 LINE L1 -18 7977 7920 1428 198 63 20 chr2 138560592 138560941 -112126913 - MLT1A1 LTR MaLR 0 365 2 626 200 95 42 chr2 138560941 138561068 -112126786 - L1MD3 LINE L1 -75 7920 7778 313 203 123 110 chr2 138561224 138561387 -112126467 - MIR SINE MIR -12 250 86 237 375 29 0 chr2 138561684 138561788 -112126066 + MIR3 SINE MIR 71 177 -31 2110 159 39 39 chr2 138562841 138563255 -112124599 - MLT2D LTR ERVL 0 414 1 1870 249 13 9 chr2 138563559 138564017 -112123837 + LTR40b LTR ERVL 1 460 -2 24 53 0 0 chr2 138565206 138565244 -112122610 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 138566470 138566498 -112121356 + AT_rich Low_complexity Low_complexity 1 28 0 388 268 22 58 chr2 138566699 138566837 -112121017 - MIR SINE MIR 0 262 130 334 362 86 16 chr2 138569052 138569295 -112118559 - MIR SINE MIR 0 262 3 344 265 161 52 chr2 138570033 138570263 -112117591 - L3 LINE CR1 -1 1576 1322 1769 168 0 20 chr2 138570598 138570902 -112116952 - AluJo SINE Alu -14 298 1 285 209 0 0 chr2 138570906 138570973 -112116881 + (TA)n Simple_repeat Simple_repeat 1 67 0 23 33 0 0 chr2 138571012 138571042 -112116812 + AT_rich Low_complexity Low_complexity 1 30 0 243 0 0 0 chr2 138576646 138576673 -112111181 + (TC)n Simple_repeat Simple_repeat 2 28 0 38 22 0 0 chr2 138576696 138576741 -112111113 + AT_rich Low_complexity Low_complexity 1 45 0 270 0 0 0 chr2 138576763 138576793 -112111061 + (CA)n Simple_repeat Simple_repeat 2 31 0 1980 127 3 3 chr2 138576929 138577221 -112110633 + AluSq SINE Alu 1 292 -21 380 342 32 19 chr2 138577692 138577850 -112110004 - MIR SINE MIR -71 191 32 22 0 0 0 chr2 138577987 138578009 -112109845 + AT_rich Low_complexity Low_complexity 1 22 0 198 227 55 180 chr2 138578969 138579097 -112108757 - L2 LINE L2 0 3313 3202 24 0 0 0 chr2 138579236 138579260 -112108594 + AT_rich Low_complexity Low_complexity 1 24 0 32 67 0 0 chr2 138579305 138579365 -112108489 + AT_rich Low_complexity Low_complexity 1 60 0 28 29 0 0 chr2 138579447 138579482 -112108372 + AT_rich Low_complexity Low_complexity 1 35 0 1035 171 62 19 chr2 138580804 138581014 -112106840 + MER7A DNA MER2_type 2 218 -128 592 229 66 0 chr2 138581115 138581237 -112106617 + MER7A DNA MER2_type 210 339 -7 1529 122 55 0 chr2 138581329 138581584 -112106270 + L1MA5A LINE L1 6025 6293 -4 1207 353 11 96 chr2 138583074 138583635 -112104219 - MLT2B1 LTR ERVL -7 513 1 346 284 70 60 chr2 138583944 138584051 -112103803 - MIR SINE MIR -10 252 141 2037 151 45 25 chr2 138584051 138584408 -112103446 - THE1B LTR MaLR 0 364 1 346 284 70 60 chr2 138584408 138584501 -112103353 - MIR SINE MIR -121 141 50 309 241 36 0 chr2 138584504 138584587 -112103267 - L1ME4a LINE L1 -230 5891 5806 27 0 0 0 chr2 138584774 138584801 -112103053 + AT_rich Low_complexity Low_complexity 1 27 0 1573 170 8 0 chr2 138585140 138585393 -112102461 - MER2 DNA MER2_type -90 255 1 2029 73 4 0 chr2 138586212 138586487 -112101367 + L1PA5 LINE L1 5879 6154 0 1500 189 7 30 chr2 138587729 138588031 -112099823 + AluJo SINE Alu 1 295 -17 24 32 0 0 chr2 138590550 138590581 -112097273 + AT_rich Low_complexity Low_complexity 1 31 0 907 182 28 22 chr2 138591333 138591514 -112096340 - LTR40a LTR ERVL 0 519 338 190 296 19 83 chr2 138591863 138591971 -112095883 + MIR SINE MIR 119 219 -43 2438 181 11 2 chr2 138592104 138592541 -112095313 - MER65C LTR ERV1 -19 442 2 1102 208 62 21 chr2 138592754 138593057 -112094797 - L1MA9 LINE L1 -25 6274 5940 279 0 0 0 chr2 138593069 138593100 -112094754 + (CA)n Simple_repeat Simple_repeat 2 32 0 816 171 26 0 chr2 138593116 138593268 -112094586 + L1MA7 LINE L1 5784 5939 -352 21 89 0 0 chr2 138594486 138594542 -112093312 + AT_rich Low_complexity Low_complexity 1 56 0 619 165 0 35 chr2 138594832 138594947 -112092907 - HY1 scRNA scRNA -1 111 1 238 265 83 61 chr2 138595840 138595972 -112091882 + L2 LINE L2 3160 3294 -19 25 0 0 0 chr2 138597106 138597131 -112090723 + AT_rich Low_complexity Low_complexity 1 25 0 2084 105 37 3 chr2 138597272 138597566 -112090288 - AluSq SINE Alu -9 304 1 24 0 0 0 chr2 138598323 138598347 -112089507 + AT_rich Low_complexity Low_complexity 1 24 0 190 247 117 123 chr2 138599207 138599369 -112088485 - MIR3 SINE MIR -29 179 19 1676 180 14 3 chr2 138599492 138599787 -112088067 - AluSx SINE Alu -14 298 1 511 93 13 0 chr2 138600052 138600127 -112087727 + MADE1 DNA Mariner 5 80 0 296 385 19 47 chr2 138600689 138600902 -112086952 - L2 LINE L2 -56 3216 3010 583 304 72 21 chr2 138600932 138601342 -112086512 + L1ME3A LINE L1 5443 5875 -295 26 0 0 0 chr2 138601418 138601444 -112086410 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr2 138601489 138601517 -112086337 + AT_rich Low_complexity Low_complexity 1 28 0 261 313 20 13 chr2 138603095 138603245 -112084609 + GA-rich Low_complexity Low_complexity 2 152 0 23 0 0 0 chr2 138605082 138605105 -112082749 + AT_rich Low_complexity Low_complexity 1 23 0 26 64 0 0 chr2 138606122 138606169 -112081685 + AT_rich Low_complexity Low_complexity 1 47 0 4009 97 2 13 chr2 138606233 138606829 -112081025 - L1PB2 LINE L1 -1 6150 5562 319 335 110 7 chr2 138607562 138607717 -112080137 - MIR SINE MIR -64 198 28 1358 209 68 52 chr2 138607832 138608213 -112079641 + MER63B DNA MER1_type 4 394 -668 1890 168 3 3 chr2 138608213 138608511 -112079343 + AluSx SINE Alu 3 300 -12 1358 209 68 52 chr2 138608511 138608555 -112079299 + MER63B DNA MER1_type 394 436 0 22 0 0 0 chr2 138609122 138609144 -112078710 + AT_rich Low_complexity Low_complexity 1 22 0 666 217 48 24 chr2 138609549 138609715 -112078139 + MER5B DNA MER1_type 4 173 -5 * 696 230 7 27 chr2 138609711 138609830 -112078024 - MER5A DNA MER1_type -11 178 61 346 174 0 70 chr2 138609830 138609916 -112077938 - MADE1 DNA Mariner 0 80 1 696 230 7 27 chr2 138609916 138609944 -112077910 - MER5A DNA MER1_type -128 61 34 1697 153 105 15 chr2 138610057 138610391 -112077463 - THE1B LTR MaLR 0 364 1 2260 114 0 9 chr2 138610679 138610995 -112076859 + AluSq SINE Alu 1 313 0 376 152 0 22 chr2 138611177 138611269 -112076585 + GA-rich Low_complexity Low_complexity 2 91 0 1601 160 32 14 chr2 138611273 138611554 -112076300 + AluJb SINE Alu 4 289 -23 180 152 0 0 chr2 138612208 138612241 -112075613 + T-rich Low_complexity Low_complexity 4 36 0 203 271 0 0 chr2 138612843 138612891 -112074963 + CT-rich Low_complexity Low_complexity 3 50 0 954 357 80 56 chr2 138613111 138613580 -112074274 - L3 LINE CR1 -1 1576 1120 679 188 12 18 chr2 138613580 138613750 -112074104 + L1MB2 LINE L1 6000 6168 -3 954 357 80 56 chr2 138613750 138614327 -112073527 - L3 LINE CR1 -457 1120 505 333 167 29 29 chr2 138614408 138614546 -112073308 + (TA)n Simple_repeat Simple_repeat 2 139 0 187 340 10 30 chr2 138614619 138614719 -112073135 - L3 LINE CR1 -1278 299 202 364 259 0 89 chr2 138615512 138615647 -112072207 - MER5A DNA MER1_type -29 160 38 2178 77 21 11 chr2 138615647 138615934 -112071920 - AluY SINE Alu -21 290 1 1092 223 92 52 chr2 138615995 138616363 -112071491 - MLT1C LTR MaLR -3 464 82 1630 178 6 16 chr2 138616446 138616761 -112071093 + AluJb SINE Alu 1 312 0 700 129 0 0 chr2 138616817 138616918 -112070936 + L1PA5 LINE L1 2 102 -6044 * 32830 57 10 2 chr2 138616896 138621928 -112065926 + L1PA5 LINE L1 1081 6148 -6 299 204 57 34 chr2 138622237 138622325 -112065529 - MLT1C LTR MaLR -295 95 6 288 206 123 14 chr2 138622359 138622432 -112065422 + MER5B DNA MER1_type 81 161 -17 1808 156 0 21 chr2 138622536 138622647 -112065207 - AluSx SINE Alu -30 282 170 7437 68 21 6 chr2 138622647 138623639 -112064215 + LTR13 LTR ERVK 1 1007 0 1808 156 0 21 chr2 138623639 138623815 -112064039 - AluSx SINE Alu -142 170 1 208 286 0 0 chr2 138624029 138624078 -112063776 + (TA)n Simple_repeat Simple_repeat 1 49 0 22 0 0 0 chr2 138624280 138624302 -112063552 + AT_rich Low_complexity Low_complexity 1 22 0 245 210 65 57 chr2 138625548 138625672 -112062182 - HAL1 LINE L1 -113 2394 2270 240 302 36 7 chr2 138626045 138626184 -112061670 - L1MEd LINE L1 -3325 2804 2662 233 277 85 11 chr2 138626365 138626459 -112061395 + MIR SINE MIR 125 225 -37 21 36 0 0 chr2 138627836 138627864 -112059990 + AT_rich Low_complexity Low_complexity 1 28 0 223 323 99 74 chr2 138628129 138628575 -112059279 + L2 LINE L2 1618 2074 -1240 980 273 114 81 chr2 138628806 138629950 -112057904 - L1MEd LINE L1 -4879 1240 59 217 347 153 0 chr2 138630418 138630490 -112057364 + L2 LINE L2 3139 3221 -51 180 111 0 0 chr2 138630493 138630520 -112057334 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 297 292 46 31 chr2 138630605 138630735 -112057119 - MIR SINE MIR -111 151 20 221 297 134 79 chr2 138631145 138631347 -112056507 + MIR SINE MIR 2 214 -48 274 303 97 35 chr2 138633584 138633729 -112054125 + MIR3 SINE MIR 2 155 -53 1976 113 3 7 chr2 138634101 138634406 -112053448 + AluSc SINE Alu 1 304 0 226 233 0 0 chr2 138634931 138634991 -112052863 + T-rich Low_complexity Low_complexity 1 60 0 1654 176 0 27 chr2 138636698 138636994 -112050860 + AluSx SINE Alu 1 288 -24 2493 65 3 0 chr2 138637521 138637830 -112050024 - AluY SINE Alu 0 311 2 13938 226 33 15 chr2 138640296 138640848 -112047006 - L1PA16 LINE L1 -1 6867 6327 294 50 0 0 chr2 138640848 138640888 -112046966 + (TTG)n Simple_repeat Simple_repeat 2 41 0 1916 146 0 4 chr2 138640888 138641169 -112046685 - AluSx SINE Alu -29 283 4 13938 226 33 15 chr2 138641169 138645900 -112041954 - L1PA16 LINE L1 -540 6328 1404 403 312 16 18 chr2 138646030 138646227 -112041627 - L1PA16 LINE L1 -6591 247 12 2750 80 11 3 chr2 138646451 138646828 -112041026 + L1P4 LINE L1 5385 5764 -404 1995 141 7 3 chr2 138647305 138647604 -112040250 + AluSx SINE Alu 1 300 -12 76 12 0 0 chr2 138647945 138648028 -112039826 + AT_rich Low_complexity Low_complexity 1 83 0 195 100 0 0 chr2 138648164 138648194 -112039660 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 262 298 83 12 chr2 138649288 138649372 -112038482 - MIR3 SINE MIR -25 183 94 1700 188 8 16 chr2 138649857 138650240 -112037614 - L1MB3 LINE L1 -3 6180 5801 10163 153 47 96 chr2 138650241 138650565 -112037289 - L1M4c LINE L1 -4017 2367 2029 549 86 0 12 chr2 138650565 138650646 -112037208 + MADE1 DNA Mariner 1 80 0 10163 153 47 96 chr2 138650646 138651123 -112036731 - L1M4c LINE L1 -4355 2029 1531 2097 153 0 0 chr2 138651123 138651430 -112036424 - AluSx SINE Alu -3 309 3 10163 153 47 96 chr2 138651430 138651465 -112036389 - L1M4c LINE L1 -4853 1531 1496 219 69 0 0 chr2 138651465 138651494 -112036360 + (CA)n Simple_repeat Simple_repeat 2 30 0 10163 153 47 96 chr2 138651494 138653122 -112034732 - L1M4c LINE L1 -4888 1496 20 22 0 0 0 chr2 138653689 138653711 -112034143 + AT_rich Low_complexity Low_complexity 1 22 0 263 115 0 66 chr2 138654508 138654569 -112033285 + L1MC4 LINE L1 6647 6703 -1339 279 0 0 0 chr2 138654572 138654603 -112033251 + (TG)n Simple_repeat Simple_repeat 2 32 0 1277 194 46 57 chr2 138654614 138654897 -112032957 - AluJb SINE Alu -30 282 3 1102 201 67 0 chr2 138654972 138655181 -112032673 - MER58A DNA MER1_type 0 224 2 35 0 0 0 chr2 138655308 138655343 -112032511 + AT_rich Low_complexity Low_complexity 1 35 0 360 0 0 0 chr2 138657693 138657733 -112030121 + (TG)n Simple_repeat Simple_repeat 1 40 0 338 338 109 26 chr2 138658321 138658747 -112029107 + L2 LINE L2 2589 3047 -225 684 288 50 72 chr2 138658781 138659184 -112028670 + MLT1I LTR MaLR 3 396 -13 287 81 0 0 chr2 138659352 138659389 -112028465 + tRNA-Gln-CAG tRNA tRNA 1 37 -38 1734 110 6 119 chr2 138659444 138659781 -112028073 + AluSx SINE Alu 1 299 -3 285 344 56 0 chr2 138660053 138660143 -112027711 + MIR SINE MIR 22 116 -146 2013 124 3 0 chr2 138660184 138660466 -112027388 - AluSx SINE Alu -29 283 1 1519 181 31 35 chr2 138660847 138661135 -112026719 + AluJo SINE Alu 1 287 -25 189 107 0 0 chr2 138661410 138661438 -112026416 + (A)n Simple_repeat Simple_repeat 1 28 0 1104 172 44 15 chr2 138662263 138662466 -112025388 + MER2 DNA MER2_type 1 209 -136 210 303 45 0 chr2 138664730 138664796 -112023058 - MIR SINE MIR -140 122 54 29 28 0 0 chr2 138664796 138664832 -112023022 + AT_rich Low_complexity Low_complexity 1 36 0 333 68 0 0 chr2 138665164 138665208 -112022646 + (TG)n Simple_repeat Simple_repeat 2 45 0 283 271 41 16 chr2 138667493 138667615 -112020239 + L1MC/D LINE L1 5668 5792 -2016 765 185 63 18 chr2 138668554 138668836 -112019018 - MLT1A2 LTR MaLR 0 374 1 374 267 135 26 chr2 138668839 138669105 -112018749 + L1MC4a LINE L1 5407 5701 -420 254 266 154 9 chr2 138669198 138669270 -112018584 + L1M4 LINE L1 2722 2782 -3364 297 0 0 0 chr2 138669270 138669303 -112018551 + (CA)n Simple_repeat Simple_repeat 2 34 0 254 266 154 9 chr2 138669303 138669444 -112018410 + L1M4 LINE L1 2782 2966 -3180 5064 192 11 9 chr2 138669462 138670421 -112017433 - L1MC1 LINE L1 -5 6328 5368 318 273 95 35 chr2 138670424 138670655 -112017199 + L1MC4a LINE L1 5707 5951 -1857 1808 94 0 0 chr2 138671439 138671683 -112016171 - AluY SINE Alu -7 304 61 1779 144 7 27 chr2 138671787 138672119 -112015735 - AluSx SINE Alu 0 312 5 373 346 9 0 chr2 138672456 138672563 -112015291 + MIR SINE MIR 53 160 -102 23 0 0 0 chr2 138672797 138672820 -112015034 + AT_rich Low_complexity Low_complexity 1 23 0 181 269 139 28 chr2 138674187 138674295 -112013559 + L2 LINE L2 3190 3309 -4 21 36 0 0 chr2 138674450 138674478 -112013376 + AT_rich Low_complexity Low_complexity 1 28 0 260 323 38 0 chr2 138675558 138675691 -112012163 + MER117 DNA MER1_type 1 138 -59 195 338 45 38 chr2 138675840 138675973 -112011881 + L2 LINE L2 3168 3301 -12 317 353 64 14 chr2 138676314 138676660 -112011194 - L1MC4a LINE L1 -1901 5907 5545 24 67 0 0 chr2 138677264 138677309 -112010545 + AT_rich Low_complexity Low_complexity 1 45 0 333 279 135 47 chr2 138677543 138677883 -112009971 - L1MC4a LINE L1 -1663 4483 4114 21 36 0 0 chr2 138678057 138678085 -112009769 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 138678097 138678122 -112009732 + AT_rich Low_complexity Low_complexity 1 25 0 2018 126 7 0 chr2 138678394 138678672 -112009182 + AluSq SINE Alu 2 281 -32 189 0 0 0 chr2 138678672 138678693 -112009161 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 298 83 17 17 chr2 138679098 138679158 -112008696 + (TA)n Simple_repeat Simple_repeat 1 60 0 322 260 81 20 chr2 138681651 138681861 -112005993 - MER67A LTR ERV1 -13 530 272 875 238 92 22 chr2 138681944 138682270 -112005584 - MER67B LTR ERV1 -278 383 47 501 172 11 0 chr2 138682318 138682405 -112005449 - MER67A LTR ERV1 -455 88 1 301 258 0 45 chr2 138683380 138683469 -112004385 - L2 LINE L2 -60 3253 3169 241 343 30 45 chr2 138685011 138685145 -112002709 + MIR SINE MIR 10 141 -121 1145 192 36 49 chr2 138685292 138685600 -112002254 + Charlie4a DNA MER1_type 12 315 -193 26 74 0 0 chr2 138685704 138685758 -112002096 + AT_rich Low_complexity Low_complexity 1 54 0 1300 73 30 73 chr2 138685848 138686023 -112001831 + L1MA3 LINE L1 6083 6247 -58 2121 125 41 16 chr2 138686023 138686392 -112001462 - MER83B LTR ERV1 0 378 1 1300 73 30 73 chr2 138686392 138686448 -112001406 + L1MA3 LINE L1 6247 6304 -1 21 0 0 0 chr2 138686448 138686469 -112001385 + AT_rich Low_complexity Low_complexity 1 21 0 670 142 8 8 chr2 138687380 138687500 -112000354 - MER39 LTR ERV1 0 707 588 1472 147 120 17 chr2 138689194 138689486 -111998368 - MER39 LTR ERV1 -114 593 272 2078 187 34 28 chr2 138689486 138690035 -111997819 - MLT2A2 LTR ERVL 0 554 1 1203 181 4 4 chr2 138690039 138690265 -111997589 - MER39B LTR ERV1 -427 226 1 1460 196 4 0 chr2 138690711 138690971 -111996883 + AluJo SINE Alu 1 261 -51 24 32 0 0 chr2 138691198 138691229 -111996625 + AT_rich Low_complexity Low_complexity 1 31 0 30 59 0 0 chr2 138691278 138691329 -111996525 + AT_rich Low_complexity Low_complexity 1 51 0 1627 231 150 43 chr2 138691385 138692131 -111995723 + LTR1B LTR ERV1 1 826 0 21 0 0 0 chr2 138692308 138692329 -111995525 + AT_rich Low_complexity Low_complexity 1 21 0 2030 116 20 0 chr2 138692532 138692824 -111995030 - AluSx SINE Alu -14 298 1 255 343 29 43 chr2 138693869 138694009 -111993845 - MIR SINE MIR -73 189 52 229 349 73 5 chr2 138694879 138695071 -111992783 - L1ME LINE L1 -588 5574 5370 212 175 0 0 chr2 138695335 138695375 -111992479 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 365 313 79 28 chr2 138697412 138697723 -111990131 - L1MC/D LINE L1 -536 5585 5482 651 221 19 72 chr2 138697724 138697894 -111989960 + MIR SINE MIR 49 208 -54 1904 160 0 3 chr2 138697894 138698187 -111989667 + AluSx SINE Alu 1 292 -20 651 221 19 72 chr2 138698187 138698224 -111989630 + MIR SINE MIR 208 245 -17 343 273 73 0 chr2 138698292 138698402 -111989452 - MER5C DNA MER1_type -205 119 2 514 277 108 65 chr2 138698464 138698510 -111989344 - L1MC/D LINE L1 -2648 3498 3455 2214 105 10 0 chr2 138698510 138698806 -111989048 - AluSx SINE Alu -10 302 4 514 277 108 65 chr2 138698806 138699192 -111988662 - L1MC/D LINE L1 -2691 3455 3047 2239 188 100 2 chr2 138699435 138699946 -111987908 - L1MB7 LINE L1 0 6184 5624 333 180 0 0 chr2 138699948 138700009 -111987845 - L1MB7 LINE L1 -1125 5021 4961 486 254 14 14 chr2 138700019 138700161 -111987693 + L1M4 LINE L1 4883 5024 -1122 24 32 0 0 chr2 138701057 138701088 -111986766 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 138701131 138701152 -111986702 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 138701675 138701697 -111986157 + AT_rich Low_complexity Low_complexity 1 22 0 2010 133 10 0 chr2 138701840 138702134 -111985720 + AluSx SINE Alu 1 297 -15 1797 170 3 10 chr2 138702484 138702778 -111985076 + AluJb SINE Alu 7 298 -14 231 311 100 34 chr2 138704279 138704465 -111983389 + MIR SINE MIR 9 202 -60 590 271 178 12 chr2 138704867 138705111 -111982743 + Charlie8 DNA MER1_type 1 283 -2134 22 35 0 0 chr2 138705821 138705850 -111982004 + AT_rich Low_complexity Low_complexity 1 29 0 21 89 0 0 chr2 138706052 138706108 -111981746 + AT_rich Low_complexity Low_complexity 1 56 0 267 31 0 0 chr2 138706203 138706235 -111981619 + (CA)n Simple_repeat Simple_repeat 2 33 0 1936 130 62 7 chr2 138708472 138708764 -111979090 - AluSg SINE Alu -2 308 1 310 232 32 32 chr2 138709275 138709370 -111978484 - L1MC5 LINE L1 -44 7917 7823 1564 160 3 49 chr2 138709540 138709846 -111978008 - MER4A LTR ERV1 0 664 373 539 141 0 11 chr2 138709899 138709991 -111977863 - MER4A LTR ERV1 -573 91 1 4287 134 42 26 chr2 138709998 138710761 -111977093 - MER4A-int LTR ERV1 -2 6596 5822 5899 108 61 36 chr2 138710861 138711686 -111976168 - MER4A-int LTR ERV1 -1667 4931 4071 2138 120 3 0 chr2 138711686 138711985 -111975869 - AluSq SINE Alu -13 300 1 5899 108 61 36 chr2 138711985 138712227 -111975627 - MER4A-int LTR ERV1 -2527 4071 3837 4049 137 79 18 chr2 138712226 138713117 -111974737 - MER4A-int LTR ERV1 -2917 3681 2737 * 1234 139 66 70 chr2 138713117 138713375 -111974479 + LTR8 LTR ERV1 1 257 -434 8921 113 43 35 chr2 138713375 138714993 -111972861 - MER4A-int LTR ERV1 -4103 2495 865 237 156 0 44 chr2 138714993 138715038 -111972816 - LTR49 LTR ERV1 -282 313 271 259 270 111 32 chr2 138715410 138715536 -111972318 - MIR SINE MIR -26 236 101 23 78 0 0 chr2 138715983 138716034 -111971820 + AT_rich Low_complexity Low_complexity 1 51 0 2975 168 101 26 chr2 138716125 138716857 -111970997 - LTR48 LTR ERV1 0 787 1 701 277 61 67 chr2 138716888 138717216 -111970638 + L2 LINE L2 2370 2695 -619 801 219 170 70 chr2 138717331 138717842 -111970012 - LTR28 LTR ERV1 -10 970 1 919 304 95 22 chr2 138717883 138718416 -111969438 + L2 LINE L2 2725 3311 -2 186 43 0 0 chr2 138718433 138718456 -111969398 + (T)n Simple_repeat Simple_repeat 1 23 0 22 35 0 0 chr2 138719311 138719340 -111968514 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 138721341 138721362 -111966492 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 138721665 138721693 -111966161 + AT_rich Low_complexity Low_complexity 1 28 0 181 349 0 0 chr2 138721729 138721772 -111966082 + MIR SINE MIR 46 88 -174 282 277 134 17 chr2 138721816 138721935 -111965919 + MIR SINE MIR 65 197 -65 355 309 36 22 chr2 138722582 138722721 -111965133 - MIR SINE MIR -109 153 13 219 219 10 94 chr2 138722828 138722924 -111964930 - L2 LINE L2 -87 3226 3139 242 289 62 62 chr2 138722971 138723068 -111964786 + MIR SINE MIR 14 110 -152 757 227 45 6 chr2 138723220 138723396 -111964458 - MER5A DNA MER1_type 0 189 7 191 184 0 20 chr2 138723497 138723546 -111964308 + (TATG)n Simple_repeat Simple_repeat 3 50 0 1885 236 45 34 chr2 138723573 138724044 -111963810 - MLT2B2 LTR ERVL -39 476 1 1172 180 33 29 chr2 138724219 138724463 -111963391 - MER58B DNA MER1_type -3 338 94 339 317 121 55 chr2 138724585 138724983 -111962871 - L2 LINE L2 -1021 2293 1870 319 283 112 99 chr2 138725144 138725299 -111962555 + MIR SINE MIR 32 192 -70 2092 121 0 0 chr2 138725299 138725597 -111962257 - AluSx SINE Alu -14 298 1 319 283 112 99 chr2 138725597 138725664 -111962190 + MIR SINE MIR 192 257 -5 488 16 0 16 chr2 138725684 138725746 -111962108 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 330 289 102 81 chr2 138726538 138726695 -111961159 + MIR SINE MIR 4 149 -113 2351 76 0 10 chr2 138726695 138727009 -111960845 - AluY SINE Alu 0 311 1 330 289 102 81 chr2 138727009 138727113 -111960741 + MIR SINE MIR 149 249 -13 684 201 0 0 chr2 138727602 138727736 -111960118 + AluJb SINE Alu 1 134 -178 2952 83 2 0 chr2 138727741 138728140 -111959714 + L1PA10 LINE L1 5759 6158 -10 302 67 22 0 chr2 138728175 138728220 -111959634 + (TC)n Simple_repeat Simple_repeat 1 46 0 41 0 0 0 chr2 138728221 138728262 -111959592 + AT_rich Low_complexity Low_complexity 1 41 0 221 83 28 0 chr2 138728289 138728325 -111959529 + (CATA)n Simple_repeat Simple_repeat 3 39 0 752 170 37 129 chr2 138728461 138728702 -111959152 - MER20 DNA MER1_type 0 219 1 387 0 0 0 chr2 138729940 138729983 -111957871 + (TG)n Simple_repeat Simple_repeat 2 44 0 937 264 23 5 chr2 138730022 138730242 -111957612 + MER58A DNA MER1_type 1 224 0 841 212 12 0 chr2 138730870 138731040 -111956814 - AluJo SINE Alu -4 308 137 633 153 0 42 chr2 138731216 138731334 -111956520 - AluJo SINE Alu -182 130 18 889 250 5 11 chr2 138731927 138732115 -111955739 - MER58A DNA MER1_type -37 187 1 213 279 0 0 chr2 138732584 138732663 -111955191 + T-rich Low_complexity Low_complexity 1 79 0 491 240 123 13 chr2 138733224 138733378 -111954476 - MER34 LTR ERV1 -5 537 367 588 191 67 102 chr2 138733394 138733619 -111954235 - MER39 LTR ERV1 -231 476 260 2044 133 0 0 chr2 138734376 138734678 -111953176 - AluY SINE Alu -9 302 1 22 70 0 0 chr2 138735622 138735665 -111952189 + AT_rich Low_complexity Low_complexity 1 43 0 2002 126 3 19 chr2 138736884 138737194 -111950660 + AluSq SINE Alu 1 305 -8 2055 113 0 55 chr2 138737322 138737649 -111950205 - AluSg1 SINE Alu 0 309 1 185 97 32 0 chr2 138737966 138737997 -111949857 - MIR SINE MIR -14 248 217 24 0 0 0 chr2 138738633 138738657 -111949197 + AT_rich Low_complexity Low_complexity 1 24 0 2151 124 7 0 chr2 138738930 138739237 -111948617 - AluSg SINE Alu -1 309 1 467 373 36 54 chr2 138739263 138739767 -111948087 - L2 LINE L2 -408 2906 2412 1189 130 0 0 chr2 138740143 138740320 -111947534 - AluSq SINE Alu -7 306 130 252 366 16 0 chr2 138740481 138740667 -111947187 - L1MEc LINE L1 -4772 1624 1436 247 283 193 5 chr2 138740830 138741017 -111946837 - L1MEc LINE L1 -5000 1205 984 207 0 0 0 chr2 138741575 138741598 -111946256 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 31 58 0 0 chr2 138742120 138742172 -111945682 + AT_rich Low_complexity Low_complexity 1 52 0 2204 93 0 20 chr2 138742356 138742658 -111945196 + AluSp SINE Alu 1 296 -17 354 74 0 0 chr2 138743613 138743667 -111944187 + (A)n Simple_repeat Simple_repeat 1 54 0 217 266 194 36 chr2 138743820 138743959 -111943895 - MIR SINE MIR -61 201 41 337 170 185 82 chr2 138744465 138744600 -111943254 + Charlie8 DNA MER1_type 72 220 -2197 254 225 70 14 chr2 138744610 138744681 -111943173 + MER5A DNA MER1_type 37 111 -78 1815 183 80 29 chr2 138746896 138747424 -111940430 - MLT2A2 LTR ERVL -2 552 1 2594 53 8 22 chr2 138748770 138749127 -111938727 - L1PA4 LINE L1 -1 6154 5803 22 35 0 0 chr2 138749173 138749202 -111938652 + AT_rich Low_complexity Low_complexity 1 29 0 190 193 18 88 chr2 138749309 138749366 -111938488 - L2 LINE L2 0 3313 3261 273 338 81 7 chr2 138749442 138749590 -111938264 + MIR SINE MIR 78 236 -26 462 318 26 7 chr2 138750351 138750502 -111937352 + MIR SINE MIR 35 188 -74 1292 182 98 139 chr2 138750725 138750885 -111936969 - LTR49 LTR ERV1 0 595 430 2268 113 0 3 chr2 138750885 138751196 -111936658 + AluSq SINE Alu 1 310 -3 1292 182 98 139 chr2 138751196 138751655 -111936199 - LTR49 LTR ERV1 -165 430 1 1689 217 51 57 chr2 138752029 138752186 -111935668 - MER110A LTR ERV1 0 491 335 2152 118 0 7 chr2 138752186 138752492 -111935362 + AluSc SINE Alu 1 304 -5 1689 217 51 57 chr2 138752492 138752845 -111935009 - MER110A LTR ERV1 -156 335 1 3627 173 40 5 chr2 138753031 138753520 -111934334 - MER6 DNA MER2_type 0 865 346 180 0 0 0 chr2 138753520 138753540 -111934314 + (TTCA)n Simple_repeat Simple_repeat 2 21 0 3627 173 40 5 chr2 138753540 138753692 -111934162 - MER6 DNA MER2_type -519 346 201 3689 163 50 1 chr2 138753693 138754400 -111933454 - L1MA4 LINE L1 -3 6479 5739 1175 224 4 17 chr2 138754401 138754638 -111933216 + MER8 DNA MER2_type 6 239 0 14022 214 45 14 chr2 138754638 138757909 -111929945 - L1MA4 LINE L1 -741 5741 1845 1565 32 0 5 chr2 138757909 138758085 -111929769 - AluY SINE Alu -5 306 130 2775 16 0 0 chr2 138758085 138758396 -111929458 - AluY SINE Alu 0 311 1 1565 32 0 5 chr2 138758396 138758408 -111929446 - AluY SINE Alu -181 130 119 14022 214 45 14 chr2 138758408 138760298 -111927556 - L1MA4 LINE L1 -4637 1845 15 1134 191 88 0 chr2 138760305 138760509 -111927345 - MER6 DNA MER2_type -643 222 1 1210 208 46 49 chr2 138760548 138760875 -111926979 - MLT2C1 LTR ERVL -71 326 1 638 270 30 40 chr2 138761628 138761828 -111926026 + L2 LINE L2 3112 3309 -4 24 0 0 0 chr2 138762583 138762607 -111925247 + AT_rich Low_complexity Low_complexity 1 24 0 1921 117 0 17 chr2 138762617 138762917 -111924937 - L1PA14 LINE L1 -2 6159 5865 30 59 0 0 chr2 138762989 138763040 -111924814 + AT_rich Low_complexity Low_complexity 1 51 0 287 310 186 40 chr2 138763704 138763930 -111923924 - MIR SINE MIR 0 262 4 1534 143 124 0 chr2 138764698 138764971 -111922883 - AluYa8 SINE Alu -3 307 1 22 35 0 0 chr2 138765785 138765814 -111922040 + AT_rich Low_complexity Low_complexity 1 29 0 1442 145 104 30 chr2 138766444 138766713 -111921141 + AluSx SINE Alu 1 289 -23 1137 213 29 131 chr2 138766724 138767157 -111920697 - L1MC/D LINE L1 -541 5701 5318 449 171 132 4 chr2 138767191 138767360 -111920494 - L1MC/D LINE L1 -813 5333 5148 193 250 0 0 chr2 138767539 138767579 -111920275 - MIR SINE MIR -4 258 219 2170 131 0 6 chr2 138767758 138768071 -111919783 - AluSx SINE Alu -1 311 1 492 288 7 20 chr2 138768696 138768842 -111919012 + MER5B DNA MER1_type 29 172 -6 26 93 0 0 chr2 138769311 138769386 -111918468 + AT_rich Low_complexity Low_complexity 1 75 0 27 0 0 0 chr2 138770190 138770217 -111917637 + AT_rich Low_complexity Low_complexity 1 27 0 2202 114 0 0 chr2 138770308 138770606 -111917248 + AluSc SINE Alu 1 298 -11 465 277 112 15 chr2 138770998 138771204 -111916650 - L1ME3A LINE L1 -5 6165 5940 930 171 6 13 chr2 138771254 138771412 -111916442 + FRAM SINE Alu 2 158 -8 212 355 64 43 chr2 138772201 138772342 -111915512 + MIR3 SINE MIR 3 146 -62 1657 185 3 19 chr2 138772446 138772754 -111915100 + AluJo SINE Alu 1 303 -9 23 0 0 0 chr2 138773918 138773941 -111913913 + AT_rich Low_complexity Low_complexity 1 23 0 183 146 0 0 chr2 138775642 138775683 -111912171 + (A)n Simple_repeat Simple_repeat 1 41 0 2032 128 3 3 chr2 138775689 138775987 -111911867 + AluSg SINE Alu 1 298 -12 1084 242 55 4 chr2 138776658 138776914 -111910940 + MLT1F1 LTR MaLR 13 281 -286 584 245 49 12 chr2 138776923 138777086 -111910768 + MLT1F1 LTR MaLR 390 558 -9 403 249 24 59 chr2 138777329 138777498 -111910356 - Charlie8 DNA MER1_type -2198 219 57 366 287 186 33 chr2 138778005 138778280 -111909574 - L2 LINE L2 -1 3312 2996 38 61 0 0 chr2 138778339 138778405 -111909449 + AT_rich Low_complexity Low_complexity 1 66 0 1850 115 0 0 chr2 138778600 138778874 -111908980 - AluSx SINE Alu 0 313 40 2025 111 0 37 chr2 138779074 138779371 -111908483 + AluSg SINE Alu 3 288 -22 26 0 0 0 chr2 138780417 138780443 -111907411 + AT_rich Low_complexity Low_complexity 1 26 0 1617 181 14 60 chr2 138780455 138780820 -111907034 - MLT1A1 LTR MaLR -13 352 5 274 316 17 0 chr2 138780820 138780937 -111906917 + (TA)n Simple_repeat Simple_repeat 1 119 0 243 0 0 0 chr2 138782044 138782071 -111905783 + (A)n Simple_repeat Simple_repeat 1 27 0 1980 117 40 7 chr2 138783123 138783240 -111904614 + AluSc SINE Alu 1 113 -196 225 83 0 0 chr2 138783240 138783276 -111904578 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1980 117 40 7 chr2 138783276 138783457 -111904397 + AluSc SINE Alu 113 309 0 1912 267 90 7 chr2 138783959 138784562 -111903292 - MER20B DNA MER1_type -130 653 1 282 336 43 21 chr2 138786165 138786305 -111901549 - MIR SINE MIR -56 206 64 3211 65 0 2 chr2 138786309 138786724 -111901130 - L1PA5 LINE L1 -1 6153 5740 1553 116 0 0 chr2 138786724 138786948 -111900906 - L1P LINE L1 -5921 225 2 372 289 27 34 chr2 138787000 138787149 -111900705 + L1MC/D LINE L1 5632 5779 -2029 32 43 0 0 chr2 138787251 138787297 -111900557 + AT_rich Low_complexity Low_complexity 1 46 0 779 208 22 66 chr2 138787512 138787738 -111900116 + MER20 DNA MER1_type 1 216 -3 809 271 33 75 chr2 138788069 138788431 -111899423 - L2 LINE L2 -1 3312 2966 2676 125 0 2 chr2 138788566 138788981 -111898873 - L1PA5 LINE L1 -1 6153 5740 1483 134 0 0 chr2 138788981 138789205 -111898649 - L1P LINE L1 -5921 225 2 490 272 21 29 chr2 138789257 138789450 -111898404 + L1MC4a LINE L1 5632 5766 -355 1396 188 116 35 chr2 138789450 138789796 -111898058 - MLT1A2 LTR MaLR 0 374 1 490 272 21 29 chr2 138789796 138789851 -111898003 + L1MC4a LINE L1 5766 5820 -301 35 41 0 0 chr2 138789902 138789951 -111897903 + AT_rich Low_complexity Low_complexity 1 49 0 872 204 9 53 chr2 138790165 138790391 -111897463 + MER20 DNA MER1_type 1 216 -3 904 283 25 64 chr2 138790722 138791114 -111896740 - L2 LINE L2 -1 3312 2936 21 57 0 0 chr2 138791847 138791882 -111895972 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 138791966 138791989 -111895865 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr2 138792900 138792923 -111894931 + (TAGA)n Simple_repeat Simple_repeat 4 26 0 2308 91 3 0 chr2 138794064 138794362 -111893492 + AluSp SINE Alu 1 299 -14 229 263 63 32 chr2 138794439 138794457 -111893397 - L3 LINE CR1 -305 1272 1256 369 0 0 0 chr2 138794457 138794498 -111893356 + (TG)n Simple_repeat Simple_repeat 2 42 0 229 263 63 32 chr2 138794498 138794574 -111893280 - L3 LINE CR1 -321 1256 1175 414 250 99 69 chr2 138796628 138797032 -111890822 - MER34 LTR ERV1 -1 541 126 188 340 28 28 chr2 138797179 138797285 -111890569 - L3 LINE CR1 -401 1176 1071 910 240 71 86 chr2 138797485 138798035 -111889819 - MER34 LTR ERV1 0 542 1 24 0 0 0 chr2 138798379 138798403 -111889451 + AT_rich Low_complexity Low_complexity 1 24 0 1465 164 3 91 chr2 138798403 138798563 -111889291 - AluJo SINE Alu -22 290 117 195 42 0 0 chr2 138798563 138798587 -111889267 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2171 101 0 0 chr2 138798588 138798866 -111888988 - AluSc SINE Alu -31 278 1 1465 164 3 91 chr2 138798866 138799021 -111888833 - AluJo SINE Alu -194 118 1 493 298 214 39 chr2 138799644 138799911 -111887943 - L2 LINE L2 -57 3256 3037 2834 6 0 0 chr2 138799911 138800222 -111887632 + AluYa5 SINE Alu 1 311 0 493 298 214 39 chr2 138800222 138800559 -111887295 - L2 LINE L2 -276 3037 2522 1621 186 74 8 chr2 138800736 138801102 -111886752 - MLT1B LTR MaLR 0 390 1 275 380 23 0 chr2 138801722 138801851 -111886003 - MIR SINE MIR -116 146 15 1678 193 0 16 chr2 138801965 138802281 -111885573 + AluJb SINE Alu 1 311 -1 25 51 0 0 chr2 138802708 138802747 -111885107 + AT_rich Low_complexity Low_complexity 1 39 0 203 217 22 0 chr2 138802769 138802815 -111885039 + CT-rich Low_complexity Low_complexity 2 48 0 183 318 201 32 chr2 138803662 138804218 -111883636 - L2 LINE L2 -468 2846 2197 1018 286 163 22 chr2 138804377 138804955 -111882899 - HAL1 LINE L1 -603 1904 1246 479 294 108 64 chr2 138805015 138805417 -111882437 - HAL1 LINE L1 -1361 1146 712 414 0 0 0 chr2 138805417 138805463 -111882391 + (TG)n Simple_repeat Simple_repeat 1 46 0 479 294 108 64 chr2 138805463 138805604 -111882250 - HAL1 LINE L1 -1795 712 579 540 283 66 6 chr2 138805625 138805791 -111882063 + MER5B DNA MER1_type 3 178 0 * 810 201 11 53 chr2 138805791 138805960 -111881894 + MER5A DNA MER1_type 28 188 -1 417 353 105 16 chr2 138806017 138806399 -111881455 - HAL1 LINE L1 -2055 452 37 338 185 292 8 chr2 138806403 138806533 -111881321 - MER53 DNA DNA -5 184 18 26 50 0 0 chr2 138806677 138806717 -111881137 + AT_rich Low_complexity Low_complexity 1 40 0 255 322 102 47 chr2 138806844 138807080 -111880774 + MIR SINE MIR 8 256 -6 25 83 0 0 chr2 138807134 138807194 -111880660 + AT_rich Low_complexity Low_complexity 1 60 0 2012 169 13 33 chr2 138807226 138807623 -111880231 - MLT1B LTR MaLR 0 390 2 453 330 31 21 chr2 138808166 138808360 -111879494 + L2 LINE L2 3118 3313 0 25 0 0 0 chr2 138809546 138809571 -111878283 + AT_rich Low_complexity Low_complexity 1 25 0 271 210 12 12 chr2 138809727 138809808 -111878046 + CT-rich Low_complexity Low_complexity 4 84 0 * 852 272 127 61 chr2 138809801 138810054 -111877800 - HAL1 LINE L1 -590 1917 1682 368 99 14 0 chr2 138810054 138810125 -111877729 + (CA)n Simple_repeat Simple_repeat 2 73 0 2336 90 0 0 chr2 138810125 138810425 -111877429 - AluSg SINE Alu -10 300 1 852 272 127 61 chr2 138810425 138810696 -111877158 - HAL1 LINE L1 -824 1683 1356 3197 217 59 13 chr2 138810715 138811878 -111875976 - Charlie1 DNA MER1_type -5 2756 1497 304 291 45 22 chr2 138811907 138812130 -111875724 - HAL1 LINE L1 -1312 1195 968 210 312 101 9 chr2 138812834 138812943 -111874911 + MIR SINE MIR 82 200 -62 23 33 0 0 chr2 138813538 138813568 -111874286 + AT_rich Low_complexity Low_complexity 1 30 0 210 105 0 0 chr2 138814349 138814387 -111873467 + (A)n Simple_repeat Simple_repeat 1 38 0 23 92 0 0 chr2 138815919 138815984 -111871870 + AT_rich Low_complexity Low_complexity 1 65 0 23 33 0 0 chr2 138816159 138816189 -111871665 + AT_rich Low_complexity Low_complexity 1 30 0 1904 132 0 14 chr2 138816365 138816653 -111871201 - AluSx SINE Alu -24 288 5 1361 178 72 4 chr2 138816715 138817015 -111870839 - AluSx SINE Alu 0 318 1 1690 173 11 0 chr2 138817231 138817515 -111870339 + AluSx SINE Alu 1 287 -25 215 140 20 0 chr2 138817517 138817567 -111870287 + (TA)n Simple_repeat Simple_repeat 1 51 0 341 217 17 0 chr2 138817894 138817954 -111869900 - AluS SINE Alu -242 61 1 1891 144 11 0 chr2 138818170 138818454 -111869400 + AluSx SINE Alu 1 287 -25 215 140 20 0 chr2 138818456 138818506 -111869348 + (TA)n Simple_repeat Simple_repeat 2 52 0 22 35 0 0 chr2 138819707 138819736 -111868118 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 138820051 138820079 -111867775 + AT_rich Low_complexity Low_complexity 1 28 0 951 202 72 10 chr2 138820527 138820735 -111867119 - MIR SINE MIR -8 254 34 22 35 0 0 chr2 138820740 138820769 -111867085 + AT_rich Low_complexity Low_complexity 1 29 0 389 294 188 19 chr2 138821094 138821254 -111866600 + MER5A DNA MER1_type 1 187 -2 207 167 21 21 chr2 138821821 138821869 -111865985 + T-rich Low_complexity Low_complexity 4 51 0 24 53 0 0 chr2 138821905 138821943 -111865911 + AT_rich Low_complexity Low_complexity 1 38 0 689 0 0 0 chr2 138823046 138823126 -111864728 + L1PA2 LINE L1 6071 6150 -5 29 0 0 0 chr2 138823126 138823155 -111864699 + AT_rich Low_complexity Low_complexity 1 29 0 500 258 23 8 chr2 138823385 138823517 -111864337 + MIR SINE MIR 2 135 -127 397 0 38 0 chr2 138823647 138823700 -111864154 + (TA)n Simple_repeat Simple_repeat 1 55 0 234 0 0 0 chr2 138823876 138823902 -111863952 + (CAT)n Simple_repeat Simple_repeat 1 26 0 975 34 0 0 chr2 138824499 138824618 -111863236 - L1PA4 LINE L1 -3 6152 6034 740 185 0 15 chr2 138825396 138825526 -111862328 + FLAM_C SINE Alu 3 130 -3 21 0 0 0 chr2 138825581 138825602 -111862252 + AT_rich Low_complexity Low_complexity 1 21 0 1153 184 59 28 chr2 138825648 138825903 -111861951 + L1MC1 LINE L1 6071 6333 0 267 318 12 0 chr2 138826024 138826109 -111861745 - MIR3 SINE MIR -23 185 100 21 0 0 0 chr2 138827323 138827344 -111860510 + AT_rich Low_complexity Low_complexity 1 21 0 209 305 25 34 chr2 138828057 138828175 -111859679 - MIR SINE MIR -10 252 136 342 123 0 0 chr2 138828516 138828573 -111859281 + (CAT)n Simple_repeat Simple_repeat 1 57 0 1402 260 101 36 chr2 138828626 138829180 -111858674 - MLT1E LTR MaLR -3 590 1 1863 122 7 17 chr2 138829593 138829919 -111857935 - AluSx SINE Alu 0 323 1 554 256 98 49 chr2 138830076 138830279 -111857575 + MER20 DNA MER1_type 4 216 -3 21 0 0 0 chr2 138831062 138831083 -111856771 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr2 138832023 138832063 -111855791 + AT_rich Low_complexity Low_complexity 1 40 0 285 253 30 0 chr2 138832063 138832162 -111855692 - L1ME4a LINE L1 -34 6087 5986 24 32 0 0 chr2 138832175 138832206 -111855648 + AT_rich Low_complexity Low_complexity 1 31 0 7666 219 55 38 chr2 138832431 138832642 -111855212 - L1MB7 LINE L1 -2 6993 6787 1655 164 21 0 chr2 138832642 138832922 -111854932 - AluSx SINE Alu -26 286 1 7666 219 55 38 chr2 138832922 138836076 -111851778 - L1MB7 LINE L1 -208 6787 3571 1973 251 79 19 chr2 138836104 138837036 -111850818 - L1MB7 LINE L1 -5791 1068 1 1475 158 11 7 chr2 138837396 138837668 -111850186 + L1MC1 LINE L1 5911 6183 -150 21 36 0 0 chr2 138838212 138838240 -111849614 + AT_rich Low_complexity Low_complexity 1 28 0 2384 97 0 0 chr2 138838508 138838819 -111849035 + AluSq SINE Alu 1 311 -2 336 48 0 0 chr2 138839686 138839728 -111848126 + (TG)n Simple_repeat Simple_repeat 1 42 0 2740 125 35 11 chr2 138839739 138840172 -111847682 + Tigger3b DNA MER2_type 1 443 -788 399 319 34 64 chr2 138840594 138840690 -111847164 - MIR3 SINE MIR -1 207 110 789 266 126 76 chr2 138840690 138841253 -111846601 + MLT1G1 LTR MaLR 5 595 0 399 319 34 64 chr2 138841253 138841360 -111846494 - MIR3 SINE MIR -98 110 10 271 347 57 28 chr2 138842255 138842431 -111845423 - MIR SINE MIR -81 181 1 809 300 118 40 chr2 138843386 138843786 -111844068 - L2 LINE L2 -1 3312 2882 606 220 216 23 chr2 138844048 138844342 -111843512 - L1MA9 LINE L1 -22 6290 5934 2236 86 0 29 chr2 138844342 138844656 -111843198 - AluSc SINE Alu -4 305 1 918 269 4 52 chr2 138844678 138844946 -111842908 - MIR SINE MIR 0 262 8 831 130 0 0 chr2 138845610 138845725 -111842129 + FLAM_C SINE Alu 15 129 -14 1250 159 0 0 chr2 138846362 138846557 -111841297 + L1PA15 LINE L1 5794 5988 -177 1733 156 10 17 chr2 138846557 138846850 -111841004 + L1PA15 LINE L1 5860 6158 -7 1967 147 27 71 chr2 138847340 138847666 -111840188 + MLT1B LTR MaLR 1 307 -83 5536 121 28 0 chr2 138847666 138848580 -111839274 - L1PB1 LINE L1 0 6151 5219 1967 147 27 71 chr2 138848580 138848661 -111839193 + MLT1B LTR MaLR 307 390 0 744 299 166 22 chr2 138849545 138849913 -111837941 - LTR16B LTR ERVL -43 421 1 346 376 23 23 chr2 138850100 138850363 -111837491 - ERVL LTR ERVL -709 5055 4793 2300 289 24 42 chr2 138850367 138851273 -111836581 - ERVL LTR ERVL -2442 2554 1665 334 304 70 29 chr2 138851312 138851483 -111836371 - ERVL LTR ERVL -3419 1577 1400 3343 55 55 0 chr2 138851515 138851949 -111835905 - L1P LINE L1 -1041 5105 4648 2737 316 56 18 chr2 138851965 138853283 -111834571 - ERVL LTR ERVL -3617 1379 11 1131 264 120 31 chr2 138853293 138853709 -111834145 - LTR16B LTR ERVL 0 464 12 356 272 12 0 chr2 138853707 138853788 -111834066 + MER81 DNA DNA 28 109 -5 * 1165 234 60 23 chr2 138854568 138854953 -111832901 - L1ME2 LINE L1 -108 6056 5658 213 205 0 0 chr2 138855303 138855342 -111832512 + (CA)n Simple_repeat Simple_repeat 2 40 0 370 88 150 38 chr2 138856150 138856230 -111831624 - L1MC5 LINE L1 -66 7895 7807 2039 92 7 0 chr2 138856539 138856810 -111831044 - AluSc SINE Alu -1 308 36 2144 90 4 0 chr2 138857476 138857779 -111830075 + AluSg SINE Alu 1 304 0 24 53 0 0 chr2 138857823 138857861 -111829993 + AT_rich Low_complexity Low_complexity 1 38 0 485 341 63 47 chr2 138858052 138858433 -111829421 - L2 LINE L2 -596 2718 2332 425 301 204 14 chr2 138859372 138859588 -111828266 - MIR SINE MIR -1 261 5 21 57 0 0 chr2 138860229 138860264 -111827590 + AT_rich Low_complexity Low_complexity 1 35 0 180 304 0 51 chr2 138860765 138860844 -111827010 + L2 LINE L2 2990 3064 -208 226 374 41 0 chr2 138862272 138862395 -111825459 + MER5B DNA MER1_type 51 178 0 26 30 0 0 chr2 138862602 138862635 -111825219 + AT_rich Low_complexity Low_complexity 1 33 0 1572 37 0 0 chr2 138862635 138862823 -111825031 - L1PA5 LINE L1 -2 6152 5965 759 180 0 0 chr2 138863998 138864126 -111823728 - FLAM_C SINE Alu -13 130 3 2412 81 0 0 chr2 138865259 138865567 -111822287 - AluY SINE Alu -1 310 3 1237 253 111 34 chr2 138865958 138866463 -111821391 + L1ME3 LINE L1 5617 6322 -12 483 309 126 0 chr2 138866492 138866520 -111821334 + L3 LINE CR1 588 611 -966 1858 98 0 36 chr2 138866520 138866794 -111821060 + AluY SINE Alu 47 310 -1 483 309 126 0 chr2 138866794 138866995 -111820859 + L3 LINE CR1 611 846 -731 185 265 0 20 chr2 138867181 138867230 -111820624 - MIR3 SINE MIR -5 203 156 255 287 163 8 chr2 138867286 138867415 -111820439 - MIR SINE MIR -108 154 6 197 354 58 51 chr2 138867765 138868022 -111819832 - L3b LINE CR1 -179 1404 1146 350 343 22 15 chr2 138868055 138868189 -111819665 + L2 LINE L2 3174 3308 -5 1059 287 60 110 chr2 138869137 138870257 -111817597 - L2 LINE L2 -2 3311 2240 272 372 114 40 chr2 138870524 138870876 -111816978 - L3 LINE CR1 -1131 446 69 246 345 46 0 chr2 138872813 138872900 -111814954 + L2 LINE L2 2267 2357 -957 355 206 0 0 chr2 138873466 138873534 -111814320 - AluJ/FRAM SINE Alu -5 297 230 239 175 0 0 chr2 138873529 138873569 -111814285 - Alu SINE Alu -259 41 2 * 186 130 239 43 chr2 138874023 138874069 -111813785 - L2 LINE L2 -4 3268 3214 23 33 0 0 chr2 138876482 138876512 -111811342 + AT_rich Low_complexity Low_complexity 1 30 0 342 0 0 0 chr2 138877431 138877469 -111810385 + (T)n Simple_repeat Simple_repeat 1 38 0 198 71 0 0 chr2 138878078 138878106 -111809748 + (CAA)n Simple_repeat Simple_repeat 2 29 0 239 324 0 49 chr2 138878690 138878792 -111809062 - LTR16A1 LTR ERVL -118 339 243 25 0 0 0 chr2 138880515 138880540 -111807314 + AT_rich Low_complexity Low_complexity 1 25 0 717 135 0 0 chr2 138881508 138881634 -111806220 + (TCC)n Simple_repeat Simple_repeat 2 127 0 234 128 0 0 chr2 138882497 138882536 -111805318 + (TA)n Simple_repeat Simple_repeat 1 39 0 264 254 202 18 chr2 138882923 138883037 -111804817 + L2 LINE L2 3179 3313 0 22 35 0 0 chr2 138883696 138883725 -111804129 + AT_rich Low_complexity Low_complexity 1 29 0 2064 129 7 3 chr2 138883775 138884084 -111803770 - AluSx SINE Alu 0 312 3 434 158 0 0 chr2 138884349 138884425 -111803429 + MADE1 DNA Mariner 4 79 -1 23 68 0 0 chr2 138885000 138885044 -111802810 + AT_rich Low_complexity Low_complexity 1 44 0 2823 167 78 0 chr2 138885166 138885692 -111802162 + L1PA16 LINE L1 5496 6062 -104 266 376 75 61 chr2 138886260 138886539 -111801315 - L2 LINE L2 -57 3215 2933 22 56 0 0 chr2 138888535 138888571 -111799283 + AT_rich Low_complexity Low_complexity 1 36 0 268 75 45 30 chr2 138889495 138889562 -111798292 + (TA)n Simple_repeat Simple_repeat 1 68 0 3859 200 45 14 chr2 138890166 138891082 -111796772 + Charlie1 DNA MER1_type 1817 2760 -1 306 180 56 0 chr2 138891257 138891338 -111796516 - L1MB8 LINE L1 -5 6179 6093 2356 160 34 4 chr2 138891383 138891851 -111796003 - L1MB4 LINE L1 -19 6161 5680 183 129 0 0 chr2 138891892 138891923 -111795931 + (TA)n Simple_repeat Simple_repeat 2 32 0 1746 186 46 15 chr2 138892448 138892775 -111795079 - MER1B DNA MER1_type 0 337 1 188 256 0 0 chr2 138893464 138893503 -111794351 - MIR SINE MIR -9 253 215 23 33 0 0 chr2 138893677 138893707 -111794147 + AT_rich Low_complexity Low_complexity 1 30 0 553 313 93 59 chr2 138894372 138895034 -111792820 + L1MEd LINE L1 861 1664 -826 1817 163 0 0 chr2 138895318 138895594 -111792260 + AluSx SINE Alu 1 276 -36 230 291 82 11 chr2 138895658 138895840 -111792014 + L1ME LINE L1 4415 4609 -1537 906 198 0 0 chr2 138895849 138896006 -111791848 + FRAM SINE Alu 6 162 -14 324 295 98 51 chr2 138896028 138896632 -111791222 + L1ME LINE L1 4624 5255 -891 338 284 37 15 chr2 138896819 138896953 -111790901 + L1ME LINE L1 5505 5641 -480 361 209 130 26 chr2 138897166 138897281 -111790573 + L1MD3 LINE L1 7856 7982 -13 2044 98 3 54 chr2 138897820 138898136 -111789718 - AluSp SINE Alu -13 300 1 860 245 43 101 chr2 138898780 138899344 -111788510 - MER34 LTR ERV1 0 542 12 2820 123 12 2 chr2 138899790 138900220 -111787634 - MER57B LTR ERV1 0 434 1 28 29 0 0 chr2 138900234 138900269 -111787585 + AT_rich Low_complexity Low_complexity 1 35 0 489 272 189 45 chr2 138900298 138900769 -111787085 - MLT1H LTR MaLR -2 547 9 38 22 0 0 chr2 138902798 138902843 -111785011 + AT_rich Low_complexity Low_complexity 1 45 0 547 279 46 68 chr2 138903753 138903990 -111783864 + MIR SINE MIR 5 236 -26 318 102 0 0 chr2 138905328 138905377 -111782477 - MADE1 DNA Mariner 0 80 32 254 143 0 0 chr2 138906204 138906246 -111781608 - MADE1 DNA Mariner -37 43 2 228 67 0 0 chr2 138906623 138906653 -111781201 + (CA)n Simple_repeat Simple_repeat 1 30 0 710 249 39 85 chr2 138908915 138909256 -111778598 - PABL_B LTR ERV1 -26 641 184 1042 117 207 0 chr2 138909256 138909352 -111778502 + MER30 DNA MER1_type 4 79 -151 462 53 13 26 chr2 138909352 138909428 -111778426 + (TAAA)n Simple_repeat Simple_repeat 2 76 0 1042 117 207 0 chr2 138909428 138909519 -111778335 + MER30 DNA MER1_type 79 230 0 710 249 39 85 chr2 138909519 138909624 -111778230 - PABL_B LTR ERV1 -483 184 76 1736 187 15 57 chr2 138909991 138910249 -111777605 + MLT1B LTR MaLR 1 237 -153 2008 118 3 16 chr2 138910249 138910555 -111777299 + AluSx SINE Alu 1 302 -10 1736 187 15 57 chr2 138910555 138910703 -111777151 + MLT1B LTR MaLR 237 390 0 581 292 32 0 chr2 138911207 138911361 -111776493 + MIR SINE MIR 8 166 -96 2157 112 0 10 chr2 138911432 138911736 -111776118 - AluSq SINE Alu -12 301 1 269 304 0 0 chr2 138912414 138912483 -111775371 + L2 LINE L2 3232 3300 -13 225 175 63 32 chr2 138913478 138913541 -111774313 - L1MC4 LINE L1 -1338 6704 6640 1060 183 10 40 chr2 138913550 138913752 -111774102 - AluJo SINE Alu -30 282 87 606 233 37 31 chr2 138914018 138914181 -111773673 + MLT2C1 LTR ERVL 1 164 -233 * 1132 219 171 45 chr2 138914097 138914472 -111773382 + MLT1D LTR MaLR 82 503 -2 2758 222 37 58 chr2 138914473 138914512 -111773342 + MLT1D-int LTR MaLR 1 39 -1332 3833 177 77 19 chr2 138914512 138915085 -111772769 - MER4D LTR ERV1 0 903 262 2236 105 0 3 chr2 138915085 138915389 -111772465 + AluSx SINE Alu 9 311 -1 3833 177 77 19 chr2 138915389 138915668 -111772186 - MER4D LTR ERV1 -641 262 1 2758 222 37 58 chr2 138915668 138916819 -111771035 + MLT1D-int LTR MaLR 39 1019 -352 2264 96 7 0 chr2 138916819 138917121 -111770733 - AluSg SINE Alu -6 304 1 2758 222 37 58 chr2 138917121 138917458 -111770396 + MLT1D-int LTR MaLR 1019 1362 -9 1878 236 43 41 chr2 138917477 138917782 -111770072 + MLT1D LTR MaLR 13 322 -183 2264 68 0 4 chr2 138917782 138918088 -111769766 - AluY SINE Alu 0 305 1 1878 236 43 41 chr2 138918088 138918273 -111769581 + MLT1D LTR MaLR 322 505 0 274 272 56 16 chr2 138918344 138918469 -111769385 - HAL1 LINE L1 -106 2401 2272 626 313 133 25 chr2 138918682 138919081 -111768773 - HAL1 LINE L1 -2012 495 54 204 368 51 17 chr2 138920127 138920244 -111767610 - MIR SINE MIR -68 140 20 22 35 0 0 chr2 138920670 138920699 -111767155 + AT_rich Low_complexity Low_complexity 1 29 0 321 26 0 0 chr2 138920976 138921014 -111766840 + (T)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 138921215 138921236 -111766618 + AT_rich Low_complexity Low_complexity 1 21 0 2440 65 7 0 chr2 138921730 138922039 -111765815 - AluY SINE Alu 0 311 1 194 295 168 0 chr2 138922843 138922938 -111764916 - L2 LINE L2 -1 3312 3202 284 0 28 0 chr2 138923732 138923768 -111764086 + (TG)n Simple_repeat Simple_repeat 2 38 0 1905 137 0 4 chr2 138923797 138924074 -111763780 + AluSg SINE Alu 21 296 -14 26 30 0 0 chr2 138925314 138925347 -111762507 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr2 138925542 138925565 -111762289 + AT_rich Low_complexity Low_complexity 1 23 0 5340 162 16 32 chr2 138925706 138926685 -111761169 + Tigger1 DNA MER2_type 2 965 -1453 1719 171 0 23 chr2 138928387 138928691 -111759163 - AluJb SINE Alu -15 297 1 769 342 63 13 chr2 138929267 138929741 -111758113 + HAL1 LINE L1 1627 2124 -383 252 0 0 0 chr2 138930940 138930968 -111756886 + (A)n Simple_repeat Simple_repeat 1 28 0 252 0 0 0 chr2 138931355 138931383 -111756471 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 26 50 0 0 chr2 138931560 138931600 -111756254 + AT_rich Low_complexity Low_complexity 1 40 0 279 278 31 88 chr2 138932058 138932285 -111755569 - L1MC5 LINE L1 -54 7907 7694 339 239 65 11 chr2 138932381 138932473 -111755381 + L1MC4 LINE L1 6607 6703 -1339 * 342 250 68 0 chr2 138932431 138932519 -111755335 - L1MC4 LINE L1 -1339 6703 6610 186 103 0 0 chr2 138932520 138932549 -111755305 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 2303 70 0 3 chr2 138934106 138934406 -111753448 - AluY SINE Alu -11 300 2 21 71 0 0 chr2 138934867 138934909 -111752945 + AT_rich Low_complexity Low_complexity 1 42 0 183 80 0 0 chr2 138935020 138935045 -111752809 + (TA)n Simple_repeat Simple_repeat 2 26 0 235 205 60 0 chr2 138935795 138935878 -111751976 - L1ME4a LINE L1 -6 6115 6028 477 269 87 81 chr2 138935879 138936016 -111751838 - HAL1 LINE L1 0 2507 2372 2323 107 0 0 chr2 138936016 138936325 -111751529 - AluSq SINE Alu -4 309 1 477 269 87 81 chr2 138936325 138936740 -111751114 - HAL1 LINE L1 -135 2372 1952 468 210 83 13 chr2 138936799 138936956 -111750898 - HAL1 LINE L1 -1331 1176 1009 313 278 19 28 chr2 138936971 138937079 -111750775 - HAL1 LINE L1 -1565 942 836 22 70 0 0 chr2 138937101 138937144 -111750710 + AT_rich Low_complexity Low_complexity 1 43 0 186 43 0 0 chr2 138938519 138938542 -111749312 + (T)n Simple_repeat Simple_repeat 1 23 0 2837 18 0 0 chr2 138938556 138938884 -111748970 - L1PA2 LINE L1 -3 6152 5825 2166 106 0 0 chr2 138939420 138939771 -111748083 + AluSx SINE Alu 1 351 0 21 0 0 0 chr2 138939891 138939912 -111747942 + AT_rich Low_complexity Low_complexity 1 21 0 316 354 200 8 chr2 138941042 138941432 -111746422 + L2 LINE L2 2512 2976 -338 6069 58 1 0 chr2 138941622 138942380 -111745474 - L1PA5 LINE L1 -4 6150 5392 519 244 34 0 chr2 138942497 138942616 -111745238 - MER94 DNA DNA -2 132 10 186 231 0 0 chr2 138942627 138942666 -111745188 + L2 LINE L2 3275 3313 0 23 0 0 0 chr2 138942692 138942715 -111745139 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 138942813 138942839 -111745015 + AT_rich Low_complexity Low_complexity 1 26 0 213 246 12 23 chr2 138943126 138943297 -111744557 + (TA)n Simple_repeat Simple_repeat 2 170 0 292 305 142 8 chr2 138943518 138943646 -111744208 + MIR SINE MIR 19 161 -74 180 307 191 31 chr2 138943756 138943981 -111743873 + L3 LINE CR1 1075 1335 -242 23 0 0 0 chr2 138944061 138944084 -111743770 + AT_rich Low_complexity Low_complexity 1 23 0 2542 52 3 0 chr2 138944231 138944538 -111743316 + AluY SINE Alu 1 308 -3 1544 188 6 46 chr2 138945356 138945681 -111742173 + AluJo SINE Alu 1 312 0 2350 45 0 10 chr2 138947191 138947510 -111740344 - AluY SINE Alu 0 316 1 253 302 0 52 chr2 138948392 138948488 -111739366 - L2 LINE L2 -44 3228 3138 904 304 72 28 chr2 138949203 138949387 -111738467 - L2 LINE L2 -1 3312 3137 2442 37 40 0 chr2 138949387 138949686 -111738168 + AluY SINE Alu 1 311 0 904 304 72 28 chr2 138949686 138949779 -111738075 - L2 LINE L2 -176 3137 3050 2069 45 48 7 chr2 138949779 138950078 -111737776 + AluY SINE Alu 1 310 0 904 304 72 28 chr2 138950078 138950455 -111737399 - L2 LINE L2 -263 3050 2628 278 265 0 6 chr2 138951174 138951336 -111736518 + (TA)n Simple_repeat Simple_repeat 2 162 0 21 36 0 0 chr2 138953401 138953429 -111734425 + AT_rich Low_complexity Low_complexity 1 28 0 22 80 0 0 chr2 138954592 138954642 -111733212 + AT_rich Low_complexity Low_complexity 1 50 0 491 306 82 15 chr2 138954748 138954944 -111732910 - MIR SINE MIR -1 261 53 3299 211 33 25 chr2 138954959 138955689 -111732165 - L1MC3 LINE L1 -18 7767 7032 3447 248 48 17 chr2 138955764 138956909 -111730945 - L1MCb LINE L1 -2148 4416 3236 * 3854 247 46 28 chr2 138956886 138956977 -111730877 - L1MCb LINE L1 -3957 2788 2700 2283 103 0 3 chr2 138956977 138957289 -111730565 - AluY SINE Alu 0 311 1 3854 247 46 28 chr2 138957289 138959756 -111728098 - L1MCb LINE L1 -4045 2700 4 974 211 0 0 chr2 138959809 138959994 -111727860 - MER5A DNA MER1_type -2 187 3 402 262 96 26 chr2 138960431 138960660 -111727194 - L1MC3 LINE L1 -312 5809 5603 2011 127 132 34 chr2 138960661 138960703 -111727151 - MSTA LTR MaLR 0 428 392 1686 177 0 44 chr2 138960703 138961019 -111726835 + AluSx SINE Alu 2 303 -9 2011 127 132 34 chr2 138961019 138961363 -111726491 - MSTA LTR MaLR -36 392 4 2206 72 3 26 chr2 138961517 138961821 -111726033 - AluY SINE Alu -14 297 1 2010 104 53 197 chr2 138962355 138962884 -111724970 - MLT2A2 LTR ERVL 0 453 1 438 253 68 68 chr2 138963224 138963414 -111724440 - L1MC3 LINE L1 -830 5316 5127 5966 178 23 5 chr2 138963527 138964729 -111723125 - L1MC1 LINE L1 -8 6325 5101 553 316 199 11 chr2 138964786 138965242 -111722612 + L2 LINE L2 2521 3068 -245 296 197 26 66 chr2 138965387 138965463 -111722391 - FRAM SINE Alu -23 143 71 202 73 49 0 chr2 138966096 138966137 -111721717 + (TA)n Simple_repeat Simple_repeat 1 43 0 2050 130 0 0 chr2 138966150 138966434 -111721420 - AluSx SINE Alu -28 284 1 2223 99 3 16 chr2 138968657 138968971 -111718883 - AluY SINE Alu -1 310 1 264 254 101 72 chr2 138970333 138970542 -111717312 - MIR SINE MIR 0 262 48 369 0 0 0 chr2 138970955 138970996 -111716858 + (TG)n Simple_repeat Simple_repeat 2 42 0 203 216 20 0 chr2 138971817 138971868 -111715986 + T-rich Low_complexity Low_complexity 2 53 0 242 222 0 0 chr2 138972935 138972980 -111714874 + MIR SINE MIR 205 249 -13 24 67 0 0 chr2 138973343 138973388 -111714466 + AT_rich Low_complexity Low_complexity 1 45 0 2020 227 58 52 chr2 138974540 138975227 -111712627 - LTR8 LTR ERV1 0 691 1 2358 203 13 89 chr2 138975813 138976521 -111711333 - MER67B LTR ERV1 -41 594 1 609 170 0 0 chr2 138976615 138976780 -111711074 + (TA)n Simple_repeat Simple_repeat 2 166 0 240 177 32 0 chr2 138976791 138976853 -111711001 + (TA)n Simple_repeat Simple_repeat 1 64 0 583 154 19 0 chr2 138976869 138976973 -111710881 + MER67A LTR ERV1 124 229 -314 229 304 0 11 chr2 138976991 138977083 -111710771 + GA-rich Low_complexity Low_complexity 4 94 0 735 251 21 109 chr2 138979041 138979201 -111708653 - MIR SINE MIR 0 262 136 2038 79 50 0 chr2 138979201 138979480 -111708374 + AluY SINE Alu 1 293 -18 735 251 21 109 chr2 138979480 138979602 -111708252 - MIR SINE MIR -126 136 5 354 294 95 8 chr2 138979740 138979866 -111707988 - L2 LINE L2 0 3272 3136 705 349 147 34 chr2 138979975 138980760 -111707094 - L2 LINE L2 -338 2976 2104 255 31 0 0 chr2 138981217 138981249 -111706605 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 185 0 40 0 chr2 138981309 138981334 -111706520 + (TTG)n Simple_repeat Simple_repeat 2 27 0 38 22 0 0 chr2 138982034 138982079 -111705775 + AT_rich Low_complexity Low_complexity 1 45 0 202 222 0 0 chr2 138982370 138982406 -111705448 + (CATATA)n Simple_repeat Simple_repeat 3 38 0 243 0 0 0 chr2 138982412 138982439 -111705415 + (TG)n Simple_repeat Simple_repeat 2 28 0 2817 238 91 29 chr2 138982458 138984019 -111703835 - L1MB8 LINE L1 -336 5842 4142 210 37 0 0 chr2 138984019 138984046 -111703808 + (TC)n Simple_repeat Simple_repeat 2 28 0 2817 238 91 29 chr2 138984046 138984281 -111703573 - L1MB8 LINE L1 -2036 4142 3923 339 262 115 0 chr2 138984281 138984403 -111703451 - LTR65 LTR ERV1 -33 636 501 338 151 0 47 chr2 138984443 138984549 -111703305 + GA-rich Low_complexity Low_complexity 4 104 0 1711 227 72 24 chr2 138984553 138985012 -111702842 - LTR65 LTR ERV1 -120 549 69 2404 140 6 3 chr2 138985013 138985371 -111702483 - THE1B LTR MaLR 0 364 6 280 192 0 0 chr2 138985370 138985422 -111702432 - LTR65 LTR ERV1 -597 72 21 * 23 0 0 0 chr2 138986217 138986240 -111701614 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 138988176 138988199 -111699655 + AT_rich Low_complexity Low_complexity 1 23 0 227 259 27 45 chr2 138989134 138989246 -111698608 + L1ME LINE L1 5794 5903 -218 234 0 0 0 chr2 138989278 138989304 -111698550 + (A)n Simple_repeat Simple_repeat 1 26 0 23 92 0 0 chr2 138990014 138990079 -111697775 + AT_rich Low_complexity Low_complexity 1 65 0 348 338 84 13 chr2 138990179 138990333 -111697521 + MIR3 SINE MIR 38 202 -6 686 272 40 0 chr2 138992208 138992381 -111695473 - MER58A DNA MER1_type -10 214 35 215 315 0 0 chr2 138992450 138992504 -111695350 + MIR SINE MIR 86 139 -123 25 51 0 0 chr2 138992977 138993016 -111694838 + AT_rich Low_complexity Low_complexity 1 39 0 609 306 70 18 chr2 138993150 138993379 -111694475 - MIR SINE MIR -15 247 7 22 94 0 0 chr2 138994102 138994166 -111693688 + AT_rich Low_complexity Low_complexity 1 64 0 302 92 25 80 chr2 138994307 138994390 -111693464 - L1PA16 LINE L1 -3 6153 6073 450 0 0 0 chr2 138994935 138994985 -111692869 + (TA)n Simple_repeat Simple_repeat 2 51 0 377 300 15 0 chr2 138995614 138995744 -111692110 + MER103 DNA DNA 5 136 -30 1999 109 35 3 chr2 138995803 138996088 -111691766 + AluSx SINE Alu 1 294 -18 23 54 0 0 chr2 138996261 138996298 -111691556 + AT_rich Low_complexity Low_complexity 1 37 0 348 24 0 0 chr2 138997096 138997137 -111690717 + (TG)n Simple_repeat Simple_repeat 2 42 0 844 211 11 11 chr2 138997137 138997317 -111690537 - AluJo SINE Alu -34 278 99 234 152 61 15 chr2 138997365 138997431 -111690423 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 234 200 70 20 chr2 138997718 138997785 -111690069 - MIR SINE MIR -64 144 75 1580 278 60 30 chr2 138997799 138998555 -111689299 - MER20B DNA MER1_type -3 781 4 1401 210 63 42 chr2 138999267 138999492 -111688362 - MLT1B LTR MaLR 0 390 152 249 33 0 0 chr2 138999492 138999522 -111688332 + (GA)n Simple_repeat Simple_repeat 1 30 0 1401 210 63 42 chr2 138999522 138999677 -111688177 - MLT1B LTR MaLR -238 152 2 502 145 40 0 chr2 138999715 138999839 -111688015 + (TA)n Simple_repeat Simple_repeat 2 130 0 1596 184 6 9 chr2 138999976 139000297 -111687557 - L1MD1 LINE L1 -1 6241 5922 1852 220 19 7 chr2 139000337 139000750 -111687104 - L1MD1 LINE L1 -302 5940 5523 1136 287 70 6 chr2 139000736 139001090 -111686764 - L1MD1 LINE L1 -858 5288 4891 * 2054 90 23 20 chr2 139001090 139001389 -111686465 - AluSg SINE Alu -10 300 1 1136 287 70 6 chr2 139001389 139001533 -111686321 - L1MD1 LINE L1 -1255 4891 4758 3578 201 113 123 chr2 139001614 139002276 -111685578 - L1MDa LINE L1 -4134 2406 1739 605 176 14 28 chr2 139002276 139002418 -111685436 - L1MA7 LINE L1 0 6291 6152 3578 201 113 123 chr2 139002418 139003986 -111683868 - L1MDa LINE L1 -4801 1739 19 199 280 98 15 chr2 139004447 139004539 -111683315 + MIR SINE MIR 79 190 -18 277 262 84 19 chr2 139004749 139004856 -111682998 + MIR SINE MIR 93 206 -56 198 0 0 0 chr2 139005663 139005685 -111682169 + (TA)n Simple_repeat Simple_repeat 2 23 0 27 81 0 0 chr2 139005998 139006060 -111681794 + AT_rich Low_complexity Low_complexity 1 62 0 1965 157 3 3 chr2 139006597 139006909 -111680945 + AluSx SINE Alu 1 312 0 1268 197 57 109 chr2 139007255 139007640 -111680214 - MLT1A1 LTR MaLR 0 365 1 412 321 82 6 chr2 139007707 139007866 -111679988 + MER5B DNA MER1_type 2 172 -6 417 236 161 125 chr2 139008112 139008535 -111679319 - MER113 DNA MER1_type? -48 473 36 247 261 75 65 chr2 139009829 139010028 -111677826 - LTR40a LTR ERVL 0 519 319 2221 104 3 0 chr2 139010203 139010512 -111677342 - AluSx SINE Alu -2 310 1 1597 215 63 27 chr2 139010512 139010922 -111676932 + LTR68 LTR ERV1 313 737 -3 247 277 12 24 chr2 139010974 139011057 -111676797 + CT-rich Low_complexity Low_complexity 2 83 0 731 266 118 46 chr2 139011156 139011319 -111676535 - L2 LINE L2 -74 3239 3089 835 55 0 0 chr2 139011319 139011428 -111676426 - L1PA5 LINE L1 0 6154 6046 731 266 118 46 chr2 139011428 139011636 -111676218 - L2 LINE L2 -224 3089 2841 1595 177 13 30 chr2 139012352 139012652 -111675202 + AluJo SINE Alu 3 297 -15 1605 89 0 0 chr2 139012668 139012871 -111674983 - AluSc SINE Alu -106 203 1 2172 110 10 10 chr2 139014123 139014432 -111673422 - AluSc SINE Alu 0 309 1 13624 223 37 19 chr2 139016795 139017233 -111670621 - L1MA5 LINE L1 -6 7315 6886 414 0 0 0 chr2 139017233 139017279 -111670575 + (TTTTA)n Simple_repeat Simple_repeat 5 50 0 13624 223 37 19 chr2 139017279 139023289 -111664565 - L1MA5 LINE L1 -435 6886 674 664 224 23 131 chr2 139023274 139023533 -111664321 - L1MA5 LINE L1 -6278 890 603 * 3917 208 6 59 chr2 139023544 139024481 -111663373 - L1M2a LINE L1 -6275 893 6 30 0 0 0 chr2 139024887 139024917 -111662937 + AT_rich Low_complexity Low_complexity 1 30 0 348 94 0 0 chr2 139026850 139026903 -111660951 + (TG)n Simple_repeat Simple_repeat 1 53 0 24 0 0 0 chr2 139027108 139027132 -111660722 + AT_rich Low_complexity Low_complexity 1 24 0 437 268 13 65 chr2 139027132 139027164 -111660690 - L1MC5 LINE L1 -31 7930 7898 1988 136 16 16 chr2 139027164 139027438 -111660416 + AluSx SINE Alu 5 281 -31 198 0 0 0 chr2 139027438 139027460 -111660394 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1988 136 16 16 chr2 139027460 139027493 -111660361 + AluSx SINE Alu 280 312 0 437 268 13 65 chr2 139027493 139027691 -111660163 - L1MC5 LINE L1 -63 7898 7712 1185 266 58 11 chr2 139027937 139028400 -111659454 - L1M4 LINE L1 -2101 4045 3561 3329 169 46 8 chr2 139028469 139029079 -111658775 - MER39 LTR ERV1 0 707 75 620 249 27 9 chr2 139029162 139029525 -111658329 - L1 LINE L1 -1206 4940 4417 2876 245 111 21 chr2 139029567 139031115 -111656739 - L1MC4a LINE L1 -6 7802 5977 1809 150 17 7 chr2 139031115 139031415 -111656439 - AluJb SINE Alu -5 307 5 2876 245 111 21 chr2 139031415 139032046 -111655808 - L1MC4a LINE L1 -1831 5977 5404 725 321 66 16 chr2 139031665 139032089 -111655765 - L1PA8A LINE L1 -323 5808 5364 * 591 351 87 35 chr2 139032089 139032640 -111655214 - L2 LINE L2 -36 3277 2700 1156 229 77 66 chr2 139033400 139033897 -111653957 - MER39 LTR ERV1 0 707 219 282 227 72 41 chr2 139033870 139033967 -111653887 - LTR48B LTR ERV1 -540 104 5 * 252 309 95 9 chr2 139034510 139034695 -111653159 - MIR SINE MIR 0 262 3 354 98 0 0 chr2 139035179 139035230 -111652624 + (CA)n Simple_repeat Simple_repeat 1 51 0 217 317 17 0 chr2 139035922 139035982 -111651872 - MIR SINE MIR -58 150 90 364 305 7 14 chr2 139036315 139036456 -111651398 + LTR33 LTR ERVL 382 521 0 243 0 0 0 chr2 139036626 139036653 -111651201 + (TG)n Simple_repeat Simple_repeat 2 28 0 34 24 0 0 chr2 139036782 139036823 -111651031 + AT_rich Low_complexity Low_complexity 1 41 0 415 320 86 0 chr2 139038048 139038223 -111649631 + MIR SINE MIR 73 262 0 215 350 78 61 chr2 139038374 139038720 -111649134 + L2 LINE L2 2626 2977 -337 25 31 0 0 chr2 139038837 139038869 -111648985 + AT_rich Low_complexity Low_complexity 1 32 0 1559 196 39 44 chr2 139038899 139039261 -111648593 - MLT1A2 LTR MaLR -11 363 4 1706 90 24 8 chr2 139039958 139040213 -111647641 + L1PA7 LINE L1 5896 6154 0 518 253 175 0 chr2 139040805 139040959 -111646895 + MER5A DNA MER1_type 9 189 0 2156 109 0 28 chr2 139041114 139041434 -111646420 - AluSx SINE Alu 0 312 2 263 255 85 43 chr2 139041657 139041798 -111646056 + MIR SINE MIR 79 225 -37 292 299 86 40 chr2 139041804 139041978 -111645876 + MIR SINE MIR 32 213 -49 24 35 0 53 chr2 139042193 139042250 -111645604 + AT_rich Low_complexity Low_complexity 1 54 0 10223 179 50 11 chr2 139042456 139043348 -111644506 + L1PA13 LINE L1 3187 4042 -2121 2694 96 3 8 chr2 139043348 139043725 -111644129 + THE1C LTR MaLR 1 375 0 10223 179 50 11 chr2 139043725 139044036 -111643818 + L1PA13 LINE L1 4042 4339 -1824 318 26 0 0 chr2 139044036 139044075 -111643779 + (CA)n Simple_repeat Simple_repeat 2 40 0 10223 179 50 11 chr2 139044075 139045746 -111642108 + L1PA13 LINE L1 4339 6144 -19 382 133 0 0 chr2 139045752 139045812 -111642042 + L1PA13 LINE L1 6085 6144 -19 327 153 17 0 chr2 139045818 139045877 -111641977 + L1PA13 LINE L1 6085 6144 -19 417 100 0 0 chr2 139045883 139045943 -111641911 + L1PA13 LINE L1 6085 6144 -19 268 220 0 0 chr2 139045954 139046013 -111641841 + L1MB4 LINE L1 6089 6147 -33 1603 231 175 23 chr2 139046043 139046688 -111641166 - L1MEc LINE L1 -1632 4583 3841 447 232 101 6 chr2 139046696 139046864 -111640990 - L1MEc LINE L1 -2936 3279 3096 1769 263 69 36 chr2 139046885 139047597 -111640257 - L1MEc LINE L1 -5625 771 37 24 85 0 0 chr2 139047922 139047981 -111639873 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr2 139048396 139048417 -111639437 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 139051388 139051412 -111636442 + AT_rich Low_complexity Low_complexity 1 24 0 1575 175 4 4 chr2 139051569 139051849 -111636005 + L1PA16 LINE L1 5876 6155 -11 2042 117 7 0 chr2 139052832 139053183 -111634671 - AluY SINE Alu 0 353 1 24 67 0 0 chr2 139053256 139053301 -111634553 + AT_rich Low_complexity Low_complexity 1 45 0 839 114 0 16 chr2 139053737 139053860 -111633994 - FLAM_C SINE Alu 0 143 23 1210 225 0 21 chr2 139055266 139055555 -111632299 + AluSx SINE Alu 2 284 -28 190 95 48 0 chr2 139055568 139055610 -111632244 + (TA)n Simple_repeat Simple_repeat 2 45 0 3999 266 48 20 chr2 139056253 139057570 -111630284 + L1M4 LINE L1 1058 2439 -4659 373 337 47 7 chr2 139057846 139058122 -111629732 + L1M4 LINE L1 4765 5051 -2116 180 0 0 0 chr2 139058620 139058640 -111629214 + (TA)n Simple_repeat Simple_repeat 2 21 0 281 283 40 22 chr2 139058640 139058912 -111628942 - AluSx SINE Alu -19 283 7 22 0 0 0 chr2 139058948 139058970 -111628884 + AT_rich Low_complexity Low_complexity 1 22 0 298 77 0 0 chr2 139059176 139059215 -111628639 + (CA)n Simple_repeat Simple_repeat 2 40 0 348 24 0 0 chr2 139060077 139060118 -111627736 + (TG)n Simple_repeat Simple_repeat 2 42 0 486 281 12 6 chr2 139060124 139060288 -111627566 - AluJo SINE Alu -40 272 108 376 359 70 22 chr2 139061280 139061734 -111626120 - HAL1 LINE L1 -405 2102 1627 601 274 70 6 chr2 139062023 139062180 -111625674 - MER58C DNA MER1_type -46 169 3 228 289 83 127 chr2 139062186 139062439 -111625415 + MIR SINE MIR 21 262 0 379 355 22 0 chr2 139063734 139063872 -111623982 + MIR SINE MIR 13 153 -109 228 67 0 0 chr2 139064223 139064253 -111623601 + (TA)n Simple_repeat Simple_repeat 2 31 0 300 309 31 37 chr2 139064468 139064488 -111623366 - L2 LINE L2 -458 2856 2837 2147 109 0 40 chr2 139064488 139064810 -111623044 + AluSc SINE Alu 1 309 0 300 309 31 37 chr2 139064810 139064951 -111622903 - L2 LINE L2 -477 2837 2696 221 378 0 20 chr2 139065064 139065162 -111622692 - L2 LINE L2 -994 2320 2225 307 314 39 59 chr2 139065291 139065597 -111622257 - L2 LINE L2 -1304 2010 1711 180 152 0 0 chr2 139070107 139070140 -111617714 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 257 242 22 55 chr2 139070289 139070380 -111617474 - L2 LINE L2 -45 3268 3181 23 78 0 0 chr2 139071214 139071265 -111616589 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr2 139071735 139071758 -111616096 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 139071872 139071911 -111615943 + AT_rich Low_complexity Low_complexity 1 39 0 4683 176 38 13 chr2 139072029 139073223 -111614631 - L1PA16 LINE L1 -6 6863 5637 * 7099 254 67 15 chr2 139073219 139076264 -111611590 - L1PA16 LINE L1 -1755 5094 1866 27 49 0 0 chr2 139076300 139076341 -111611513 + AT_rich Low_complexity Low_complexity 1 41 0 6924 55 0 1 chr2 139076383 139078038 -111609816 - L1PA6 LINE L1 -13 6141 4480 2654 52 14 3 chr2 139078038 139078385 -111609469 + L1PA6 LINE L1 4133 4483 -1663 21 36 0 0 chr2 139078486 139078514 -111609340 + AT_rich Low_complexity Low_complexity 1 28 0 2213 129 0 0 chr2 139078979 139079289 -111608565 + AluSg SINE Alu 1 310 0 32 26 0 0 chr2 139079338 139079377 -111608477 + AT_rich Low_complexity Low_complexity 1 39 0 536 211 98 16 chr2 139079679 139079866 -111607988 - L1MD3 LINE L1 -166 7829 7537 21 57 0 0 chr2 139080197 139080232 -111607622 + AT_rich Low_complexity Low_complexity 1 35 0 1192 241 56 9 chr2 139080480 139080800 -111607054 + MER2 DNA MER2_type 11 345 0 28 29 0 0 chr2 139081662 139081697 -111606157 + AT_rich Low_complexity Low_complexity 1 35 0 322 393 54 16 chr2 139081950 139082192 -111605662 + L3 LINE CR1 1051 1301 -276 183 318 11 34 chr2 139082163 139082251 -111605603 + L3b LINE CR1 1315 1400 -183 * 22 35 0 0 chr2 139082501 139082530 -111605324 + AT_rich Low_complexity Low_complexity 1 29 0 301 366 30 34 chr2 139082575 139082810 -111605044 - L1ME LINE L1 -354 5767 5534 23 0 0 0 chr2 139083620 139083643 -111604211 + AT_rich Low_complexity Low_complexity 1 23 0 205 335 46 46 chr2 139083762 139083914 -111603940 + MIR SINE MIR 10 161 -101 320 326 0 69 chr2 139084392 139084536 -111603318 - MIR3 SINE MIR -31 177 44 253 255 147 0 chr2 139084828 139084930 -111602924 - MIR3 SINE MIR -18 190 74 2539 55 0 0 chr2 139085471 139085779 -111602075 + AluY SINE Alu 1 308 -3 555 252 17 74 chr2 139086050 139086280 -111601574 + MIR SINE MIR 1 217 -45 232 297 0 0 chr2 139137403 139137494 -111550360 + G-rich Low_complexity Low_complexity 1 91 0 2188 105 3 0 chr2 139137707 139138002 -111549852 - AluSx SINE Alu -16 296 1 851 93 0 0 chr2 139138462 139138580 -111549274 - AluSg/x SINE Alu 0 309 192 758 322 31 4 chr2 139139512 139139767 -111548087 - MIR SINE MIR 0 262 1 2404 67 0 0 chr2 139139945 139140244 -111547610 + AluY SINE Alu 6 304 -7 210 71 0 0 chr2 139141885 139141913 -111545941 + (A)n Simple_repeat Simple_repeat 1 28 0 1322 181 153 12 chr2 139142670 139142991 -111544863 + MSTA LTR MaLR 1 366 -62 6751 214 28 11 chr2 139143091 139144743 -111543111 - L1 LINE L1 -1900 4246 2567 6013 168 67 13 chr2 139144718 139145077 -111542777 - L1PBb LINE L1 -3757 2446 2108 * 2361 75 7 0 chr2 139145077 139145383 -111542471 + AluY SINE Alu 1 308 -3 6013 168 67 13 chr2 139145383 139147077 -111540777 - L1PBb LINE L1 -4095 2108 278 978 286 122 27 chr2 139147281 139147722 -111540132 - LTR16C LTR ERVL 0 491 9 234 0 0 0 chr2 139148654 139148680 -111539174 + (TG)n Simple_repeat Simple_repeat 2 27 0 793 261 0 0 chr2 139149629 139149805 -111538049 + FRAM SINE Alu 1 173 -3 323 244 46 15 chr2 139150619 139150750 -111537104 + L1ME4a LINE L1 5776 5910 -211 1512 86 0 43 chr2 139150914 139151148 -111536706 + L1PA10 LINE L1 5945 6168 0 444 95 24 12 chr2 139151450 139151534 -111536320 + L1PB1 LINE L1 6066 6150 -1 307 338 50 7 chr2 139151709 139151864 -111535990 - MIR SINE MIR -60 148 16 2117 113 7 0 chr2 139153222 139153544 -111534310 - AluSx SINE Alu 0 312 1 617 361 25 21 chr2 139154748 139155028 -111532826 + LTR33 LTR ERVL 46 326 -195 247 281 34 22 chr2 139155069 139155158 -111532696 + LTR33 LTR ERVL 432 521 0 215 379 33 28 chr2 139155159 139155341 -111532513 - L2 LINE L2 -642 2672 2490 865 225 10 34 chr2 139157607 139157816 -111530038 + MER3 DNA MER1_type 5 208 -1 38 0 0 0 chr2 139158488 139158526 -111529328 + AT_rich Low_complexity Low_complexity 1 38 0 258 32 0 0 chr2 139161096 139161127 -111526727 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 357 327 121 35 chr2 139161127 139161632 -111526222 - L2 LINE L2 -17 3255 2709 22 56 0 0 chr2 139161808 139161844 -111526010 + AT_rich Low_complexity Low_complexity 1 36 0 368 289 2 10 chr2 139162477 139162587 -111525267 + MIR3 SINE MIR 51 162 -46 2374 74 0 6 chr2 139162664 139162976 -111524878 - AluY SINE Alu -1 310 1 459 342 52 26 chr2 139163311 139163542 -111524312 - MIR SINE MIR -6 256 20 1617 207 51 14 chr2 139163861 139164213 -111523641 - MLT1A1 LTR MaLR 0 365 1 5265 228 46 65 chr2 139164213 139165591 -111522263 - MLT1A1-int LTR MaLR 0 1735 384 10574 95 18 22 chr2 139165691 139167309 -111520545 - HERVH LTR ERV1 -5310 2403 793 3053 103 2 19 chr2 139167364 139167831 -111520023 - HERVH LTR ERV1 -7254 459 1 2662 81 98 5 chr2 139167833 139168241 -111519613 - LTR7 LTR ERV1 -2 448 3 21 57 0 0 chr2 139168624 139168659 -111519195 + AT_rich Low_complexity Low_complexity 1 35 0 488 266 25 80 chr2 139168733 139168932 -111518922 - MIR SINE MIR -16 246 59 1959 103 18 25 chr2 139168932 139169214 -111518640 + AluSq SINE Alu 4 283 -30 460 205 16 33 chr2 139169453 139169575 -111518279 + MER97b DNA MER1_type? 50 169 -884 383 276 74 87 chr2 139169645 139169968 -111517886 + MER113 DNA MER1_type? 203 521 0 24 91 0 0 chr2 139171062 139171128 -111516726 + AT_rich Low_complexity Low_complexity 1 66 0 21 0 0 0 chr2 139171246 139171267 -111516587 + AT_rich Low_complexity Low_complexity 1 21 0 454 298 84 34 chr2 139171902 139172164 -111515690 - L3b LINE CR1 -206 1377 1103 272 307 129 0 chr2 139172502 139172603 -111515251 + L2 LINE L2 3199 3312 -1 183 287 69 50 chr2 139172902 139173003 -111514851 + MIR SINE MIR 111 213 -49 2140 262 101 20 chr2 139173378 139173415 -111514439 - L1ME1 LINE L1 -5 6161 6128 1919 163 3 0 chr2 139173415 139173721 -111514133 - AluSx SINE Alu -5 307 1 2140 262 101 20 chr2 139173721 139174525 -111513329 - L1ME1 LINE L1 -38 6128 5254 1897 246 42 32 chr2 139174553 139174657 -111513197 - L1ME1 LINE L1 -3136 3010 2909 2004 157 0 3 chr2 139174657 139174970 -111512884 - AluSx SINE Alu 0 312 1 1897 246 42 32 chr2 139174970 139175575 -111512279 - L1ME1 LINE L1 -3237 2909 2294 7337 115 23 31 chr2 139175788 139176937 -111510917 - Charlie3 DNA MER1_type -4 2706 1568 10226 117 67 8 chr2 139177063 139178221 -111509633 - Charlie3 DNA MER1_type -1080 1626 354 1742 165 7 3 chr2 139178221 139178512 -111509342 - AluJb SINE Alu -20 292 1 10226 117 67 8 chr2 139178512 139178889 -111508965 - Charlie3 DNA MER1_type -2352 354 1 4738 98 135 45 chr2 139179275 139180233 -111507621 - MER11A LTR ERVK 0 1266 223 287 335 84 18 chr2 139181000 139181167 -111506687 + MIR SINE MIR 72 249 -13 274 298 46 53 chr2 139181921 139182072 -111505782 - MIR SINE MIR -4 258 109 349 282 32 32 chr2 139182130 139182254 -111505600 + MIR3 SINE MIR 56 179 -29 21 57 0 0 chr2 139182491 139182526 -111505328 + AT_rich Low_complexity Low_complexity 1 35 0 346 320 219 23 chr2 139183904 139184123 -111503731 + MIR SINE MIR 1 262 0 193 220 44 88 chr2 139184814 139184905 -111502949 + L2 LINE L2 2825 2911 -361 431 306 100 48 chr2 139185067 139185378 -111502476 + L2 LINE L2 2960 3286 -27 5954 175 11 6 chr2 139185415 139187433 -111500421 - L1PB2 LINE L1 -2 6865 4837 271 218 7 70 chr2 139187551 139187693 -111500161 + C-rich Low_complexity Low_complexity 3 135 0 5331 269 17 19 chr2 139187867 139189678 -111498176 - L1PB2 LINE L1 -5219 1644 2 764 179 117 0 chr2 139190280 139190425 -111497429 - MSTD LTR MaLR 0 396 235 473 276 55 75 chr2 139190425 139190573 -111497281 + MIR SINE MIR 3 145 -117 1895 137 164 16 chr2 139190573 139190946 -111496908 - MSTA LTR MaLR 0 428 1 473 276 55 75 chr2 139190946 139191051 -111496803 + MIR SINE MIR 145 251 -11 26 74 0 0 chr2 139191803 139191857 -111495997 + AT_rich Low_complexity Low_complexity 1 54 0 232 193 0 0 chr2 139192604 139192661 -111495193 - LTR66 LTR ERVL -159 451 395 234 277 0 0 chr2 139194349 139194414 -111493440 + A-rich Low_complexity Low_complexity 1 65 0 355 266 282 5 chr2 139195067 139195255 -111492599 + MIR SINE MIR 2 241 -21 22 0 0 0 chr2 139195428 139195450 -111492404 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 139195532 139195564 -111492290 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr2 139196010 139196034 -111491820 + AT_rich Low_complexity Low_complexity 1 24 0 1945 129 7 10 chr2 139196194 139196504 -111491350 + AluSq SINE Alu 3 311 -2 26 0 0 0 chr2 139197655 139197681 -111490173 + AT_rich Low_complexity Low_complexity 1 26 0 352 277 54 9 chr2 139199068 139199180 -111488674 - MIR3 SINE MIR -3 205 89 206 174 22 0 chr2 139199182 139199228 -111488626 + (TTAAA)n Simple_repeat Simple_repeat 2 48 0 680 175 0 0 chr2 139199279 139199393 -111488461 - MER58B DNA MER1_type -1 340 227 1721 158 4 0 chr2 139199418 139199683 -111488171 + AluJb SINE Alu 17 282 -30 3370 176 6 3 chr2 139201743 139202385 -111485469 - L1MA8 LINE L1 -3 6288 5645 3873 177 24 17 chr2 139202385 139203142 -111484712 + Tigger1 DNA MER2_type 1 762 -1656 1130 131 6 6 chr2 139203151 139203327 -111484527 + Tigger1 DNA MER2_type 2243 2418 0 1813 192 40 2 chr2 139203327 139203928 -111483926 - L1MA8 LINE L1 -643 5648 5030 29 60 0 0 chr2 139204617 139204667 -111483187 + AT_rich Low_complexity Low_complexity 1 50 0 379 311 82 16 chr2 139204818 139205001 -111482853 + MIR SINE MIR 49 243 -19 2026 119 7 3 chr2 139205228 139205522 -111482332 + AluSx SINE Alu 1 295 -17 37 39 0 0 chr2 139205689 139205740 -111482114 + AT_rich Low_complexity Low_complexity 1 51 0 2027 126 0 0 chr2 139207262 139207539 -111480315 + AluSx SINE Alu 1 277 -35 23 33 0 0 chr2 139208640 139208670 -111479184 + AT_rich Low_complexity Low_complexity 1 30 0 529 279 124 39 chr2 139209502 139209735 -111478119 - MIR SINE MIR 0 262 10 183 80 0 0 chr2 139209863 139209888 -111477966 + (CA)n Simple_repeat Simple_repeat 2 26 0 27 62 0 0 chr2 139210712 139210760 -111477094 + AT_rich Low_complexity Low_complexity 1 48 0 33 0 0 0 chr2 139210954 139210987 -111476867 + AT_rich Low_complexity Low_complexity 1 33 0 465 243 18 0 chr2 139212291 139212402 -111475452 + AluJb SINE Alu 196 308 -4 22 0 0 0 chr2 139213782 139213804 -111474050 + AT_rich Low_complexity Low_complexity 1 22 0 192 200 0 0 chr2 139214373 139214423 -111473431 + (TG)n Simple_repeat Simple_repeat 1 50 0 * 198 103 0 0 chr2 139214422 139214451 -111473403 + (GA)n Simple_repeat Simple_repeat 1 29 0 2344 102 0 6 chr2 139216043 139216357 -111471497 + AluSx SINE Alu 1 312 0 205 200 0 0 chr2 139216563 139216603 -111471251 + A-rich Low_complexity Low_complexity 1 40 0 26 30 0 0 chr2 139216723 139216756 -111471098 + AT_rich Low_complexity Low_complexity 1 33 0 31 58 0 0 chr2 139216944 139216996 -111470858 + AT_rich Low_complexity Low_complexity 1 52 0 2039 136 3 0 chr2 139217016 139217310 -111470544 + AluSx SINE Alu 2 296 -16 2587 88 95 5 chr2 139218010 139218421 -111469433 - LTR7 LTR ERV1 -2 448 1 2386 98 48 13 chr2 139218421 139218800 -111469054 - HERVH LTR ERV1 0 7713 7322 1325 148 19 0 chr2 139218798 139219014 -111468840 - HERVH LTR ERV1 -1894 5819 5600 * 8263 112 2 5 chr2 139219015 139220740 -111467114 - HERVH LTR ERV1 -1818 5273 3492 957 115 20 0 chr2 139220730 139220878 -111466976 - HERVH LTR ERV1 -4423 3290 3140 * 2958 109 0 27 chr2 139220857 139221332 -111466522 - HERVH LTR ERV1 -4718 2995 2534 605 243 178 59 chr2 139221446 139221750 -111466104 + MLT1J LTR MaLR 71 410 -101 189 0 0 0 chr2 139222002 139222023 -111465831 + (A)n Simple_repeat Simple_repeat 1 21 0 216 0 0 0 chr2 139222470 139222494 -111465360 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 1180 147 10 30 chr2 139223018 139223215 -111464639 + AluJo SINE Alu 105 297 -15 1314 142 0 0 chr2 139223471 139223654 -111464200 + AluSg/x SINE Alu 112 294 -18 2424 102 39 58 chr2 139223654 139224067 -111463787 - MER4A LTR ERV1 -259 405 1 292 332 93 2 chr2 139224078 139224216 -111463638 - MIR SINE MIR -59 149 5 881 249 99 67 chr2 139224618 139225341 -111462513 - L1ME2 LINE L1 -18 6146 5447 342 0 0 0 chr2 139225341 139225379 -111462475 + (TG)n Simple_repeat Simple_repeat 1 38 0 881 249 99 67 chr2 139225379 139225993 -111461861 - L1ME2 LINE L1 -717 5447 4854 1733 152 10 23 chr2 139225993 139226302 -111461552 - AluSg SINE Alu -5 305 1 881 249 99 67 chr2 139226302 139226745 -111461109 - L1ME2 LINE L1 -1310 4854 4243 768 211 23 34 chr2 139227194 139227369 -111460485 - MER5B DNA MER1_type 0 178 6 2230 114 0 0 chr2 139227911 139228217 -111459637 + AluSx SINE Alu 1 306 -6 339 339 57 21 chr2 139228627 139228819 -111459035 + MIR SINE MIR 48 246 -16 205 336 60 47 chr2 139229380 139229529 -111458325 + MIR SINE MIR 14 164 -98 365 184 112 64 chr2 139229807 139229932 -111457922 - AluSc SINE Alu -117 182 52 31 0 0 0 chr2 139230771 139230802 -111457052 + AT_rich Low_complexity Low_complexity 1 31 0 1331 210 29 4 chr2 139230897 139231178 -111456676 - AluJo SINE Alu -24 288 1 294 29 0 0 chr2 139232334 139232369 -111455485 + (CA)n Simple_repeat Simple_repeat 2 36 0 1688 159 95 0 chr2 139232523 139232838 -111455016 - MER7A DNA MER2_type -3 343 1 2101 137 3 0 chr2 139233771 139234077 -111453777 - AluSx SINE Alu -5 307 1 212 297 27 14 chr2 139235275 139235349 -111452505 + MIR SINE MIR 74 148 -114 389 283 45 72 chr2 139235383 139235648 -111452206 + MIR SINE MIR 5 262 0 21 57 0 0 chr2 139235650 139235685 -111452169 + AT_rich Low_complexity Low_complexity 1 35 0 1799 155 10 7 chr2 139235940 139236244 -111451610 - AluSx SINE Alu -7 305 1 1997 125 3 7 chr2 139238282 139238578 -111449276 + AluSc SINE Alu 1 295 -14 21 0 0 0 chr2 139239863 139239884 -111447970 + AT_rich Low_complexity Low_complexity 1 21 0 640 250 90 55 chr2 139240041 139240448 -111447406 + L1MC5 LINE L1 6497 6863 -945 348 24 0 0 chr2 139240448 139240489 -111447365 + (CA)n Simple_repeat Simple_repeat 2 42 0 640 250 90 55 chr2 139240489 139240570 -111447284 + L1MC5 LINE L1 6863 6940 -868 240 252 129 45 chr2 139240577 139240732 -111447122 + L1MC5 LINE L1 7397 7564 -397 330 291 100 0 chr2 139240994 139241104 -111446750 - L2 LINE L2 0 3313 3193 698 190 42 7 chr2 139241871 139242013 -111445841 - FAM SINE Alu -27 158 12 25 0 0 0 chr2 139243181 139243206 -111444648 + AT_rich Low_complexity Low_complexity 1 25 0 365 394 5 0 chr2 139243294 139243487 -111444367 - MER117 DNA MER1_type -3 194 1 27 49 0 0 chr2 139244000 139244041 -111443813 + AT_rich Low_complexity Low_complexity 1 41 0 33 66 0 0 chr2 139244156 139244217 -111443637 + AT_rich Low_complexity Low_complexity 1 61 0 21 36 0 0 chr2 139244476 139244504 -111443350 + AT_rich Low_complexity Low_complexity 1 28 0 335 157 0 0 chr2 139245989 139246040 -111441814 - MER66A LTR ERV1 -140 338 288 185 329 14 0 chr2 139246297 139246370 -111441484 + L2 LINE L2 2567 2640 -674 471 333 234 33 chr2 139248474 139249617 -111438237 + L2 LINE L2 1371 2743 -571 28 48 0 0 chr2 139250508 139250550 -111437304 + AT_rich Low_complexity Low_complexity 1 42 0 27 0 0 0 chr2 139251356 139251383 -111436471 + AT_rich Low_complexity Low_complexity 1 27 0 233 155 17 0 chr2 139251415 139251473 -111436381 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 311 314 75 67 chr2 139251671 139251910 -111435944 - L1M2 LINE L1 -5718 1131 891 27 0 0 0 chr2 139252104 139252131 -111435723 + AT_rich Low_complexity Low_complexity 1 27 0 233 155 17 0 chr2 139252164 139252222 -111435632 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 207 0 0 0 chr2 139253420 139253443 -111434411 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 242 359 0 43 chr2 139253478 139253570 -111434284 - L2 LINE L2 -62 3210 3123 314 237 0 13 chr2 139253923 139253999 -111433855 + Tigger5 DNA MER2_type 2243 2317 -6 * 355 276 0 13 chr2 139253998 139254074 -111433780 - Tigger5 DNA MER2_type -2248 75 1 495 376 143 14 chr2 139254113 139254826 -111433028 - L2 LINE L2 -520 2794 1990 351 0 0 0 chr2 139255024 139255063 -111432791 + (TA)n Simple_repeat Simple_repeat 2 40 0 212 448 6 6 chr2 139255103 139255266 -111432588 - L2 LINE L2 -2105 1209 1047 295 355 58 70 chr2 139255636 139256104 -111431750 - L2 LINE L2 -2518 796 335 369 326 198 24 chr2 139256157 139256785 -111431069 - L2 LINE L2 -458 2856 2120 363 275 51 33 chr2 139257906 139258185 -111429669 + MER46C DNA MER2_type 9 336 -2 23 33 0 0 chr2 139259045 139259075 -111428779 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr2 139261334 139261370 -111426484 + AT_rich Low_complexity Low_complexity 1 36 0 205 297 133 55 chr2 139262885 139263013 -111424841 - L2 LINE L2 -214 3058 2921 526 135 67 10 chr2 139263052 139263156 -111424698 + L1PA13 LINE L1 6054 6163 0 2220 117 0 0 chr2 139264049 139264358 -111423496 + AluSg SINE Alu 1 309 -1 301 327 207 9 chr2 139264502 139264719 -111423135 + MIR SINE MIR 1 260 -2 21 0 0 0 chr2 139264750 139264771 -111423083 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 139265443 139265478 -111422376 + AT_rich Low_complexity Low_complexity 1 35 0 21 107 0 0 chr2 139266966 139267050 -111420804 + AT_rich Low_complexity Low_complexity 1 84 0 1329 169 109 32 chr2 139267338 139267651 -111420203 + MER1B DNA MER1_type 1 337 0 264 308 29 29 chr2 139268323 139268427 -111419427 + MIR3 SINE MIR 91 194 -14 204 281 78 94 chr2 139268614 139268742 -111419112 - L3 LINE CR1 -873 704 579 25 0 0 0 chr2 139269111 139269136 -111418718 + AT_rich Low_complexity Low_complexity 1 25 0 207 176 0 0 chr2 139269786 139269820 -111418034 + (CA)n Simple_repeat Simple_repeat 1 34 0 304 328 68 49 chr2 139270324 139270632 -111417222 - L2 LINE L2 0 3313 3000 315 179 0 0 chr2 139270649 139270705 -111417149 + L1MC4 LINE L1 6648 6703 -1339 367 250 23 0 chr2 139270705 139270793 -111417061 + L1MC4 LINE L1 6614 6703 -1339 270 160 0 0 chr2 139270836 139270886 -111416968 + (TA)n Simple_repeat Simple_repeat 1 50 0 360 363 88 21 chr2 139270897 139271272 -111416582 - L2 LINE L2 -1057 2257 1858 727 223 72 0 chr2 139271309 139271475 -111416379 + MER20 DNA MER1_type 41 218 -1 831 297 185 20 chr2 139271613 139272067 -111415787 + L2 LINE L2 2043 2571 -743 507 346 112 0 chr2 139272074 139272288 -111415566 + L2 LINE L2 2456 2693 -621 246 227 149 35 chr2 139272414 139272496 -111415358 - L1MA10 LINE L1 -2 6332 6251 812 237 72 75 chr2 139272496 139272829 -111415025 - L1ME1 LINE L1 -91 6075 5744 384 378 85 22 chr2 139272893 139273303 -111414551 - L1MC4a LINE L1 -1913 5895 5460 527 332 128 29 chr2 139273336 139274108 -111413746 - L1MC4a LINE L1 -748 5398 4550 513 139 0 12 chr2 139274432 139274518 -111413336 - L1P4 LINE L1 -656 5512 5428 24 32 0 0 chr2 139275846 139275877 -111411977 + AT_rich Low_complexity Low_complexity 1 31 0 185 258 72 82 chr2 139276948 139277045 -111410809 - L3 LINE CR1 -83 1494 1399 959 308 126 16 chr2 139279933 139280511 -111407343 + L1ME3 LINE L1 5486 6127 -35 209 260 0 0 chr2 139281127 139281177 -111406677 + (TG)n Simple_repeat Simple_repeat 2 51 0 22 70 0 0 chr2 139281203 139281246 -111406608 + AT_rich Low_complexity Low_complexity 1 43 0 234 191 0 0 chr2 139281304 139281351 -111406503 + (CA)n Simple_repeat Simple_repeat 2 48 0 198 361 124 24 chr2 139281740 139281909 -111405945 - MER5A DNA MER1_type 0 189 4 228 35 0 0 chr2 139282496 139282525 -111405329 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 828 326 133 12 chr2 139283059 139283489 -111404365 - L2 LINE L2 -9 3304 2823 405 282 196 21 chr2 139283707 139283998 -111403856 - LTR16A1 LTR ERVL -26 431 90 197 311 51 43 chr2 139284413 139284528 -111403326 + MIR SINE MIR 34 151 -57 1873 156 0 3 chr2 139284528 139284816 -111403038 + AluSq SINE Alu 1 287 -26 321 26 0 0 chr2 139284817 139284855 -111402999 + (TA)n Simple_repeat Simple_repeat 1 38 0 2037 88 0 0 chr2 139285218 139285491 -111402363 - L1PA10 LINE L1 -285 5883 5611 8182 132 20 17 chr2 139285538 139286287 -111401567 - L1PA10 LINE L1 -743 5403 4668 1878 138 0 0 chr2 139286287 139286596 -111401258 - AluSx SINE Alu 0 322 14 8182 132 20 17 chr2 139286596 139287285 -111400569 - L1PA10 LINE L1 -1478 4668 3983 215 122 0 102 chr2 139287695 139287744 -111400110 + (TG)n Simple_repeat Simple_repeat 1 44 0 216 209 0 0 chr2 139288020 139288063 -111399791 + T-rich Low_complexity Low_complexity 1 43 0 1669 104 97 7 chr2 139289815 139290084 -111397770 - AluSg SINE Alu -17 293 1 21 0 0 0 chr2 139290162 139290183 -111397671 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 139292692 139292714 -111395140 + AT_rich Low_complexity Low_complexity 1 22 0 975 41 0 0 chr2 139292913 139293034 -111394820 - L1PA4 LINE L1 -3 6152 6032 240 348 0 0 chr2 139294937 139295006 -111392848 - L2 LINE L2 0 3313 3245 22 80 0 0 chr2 139295084 139295134 -111392720 + AT_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr2 139295283 139295312 -111392542 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 139295456 139295481 -111392373 + AT_rich Low_complexity Low_complexity 1 25 0 1811 132 7 45 chr2 139295494 139295782 -111392072 - AluSx SINE Alu -29 283 7 704 165 0 8 chr2 139295822 139295955 -111391899 + FLAM_C SINE Alu 2 133 0 1361 128 27 2 chr2 139296826 139297050 -111390804 - L1PA12 LINE L1 -70 6098 5871 255 317 129 35 chr2 139297623 139297825 -111390029 - MIR SINE MIR 0 262 42 255 358 192 14 chr2 139298932 139299276 -111388578 + L2 LINE L2 2242 2646 -668 24 0 0 0 chr2 139299789 139299813 -111388041 + AT_rich Low_complexity Low_complexity 1 24 0 269 233 153 44 chr2 139299820 139299956 -111387898 - MIR SINE MIR -65 143 44 1198 193 5 0 chr2 139300923 139301136 -111386718 + AluJb SINE Alu 87 300 -12 27 0 0 0 chr2 139303262 139303289 -111384565 + AT_rich Low_complexity Low_complexity 1 27 0 4265 154 28 11 chr2 139304870 139305618 -111382236 - L1PB4 LINE L1 0 6156 5396 3029 201 6 15 chr2 139305597 139306249 -111381605 - L1PB4 LINE L1 -952 5194 4549 * 260 305 42 54 chr2 139306448 139306687 -111381167 + L1ME LINE L1 5504 5739 -382 22 88 0 0 chr2 139306848 139306905 -111380949 + AT_rich Low_complexity Low_complexity 1 57 0 217 229 21 0 chr2 139306914 139306962 -111380892 - MIR SINE MIR -1 261 213 224 241 0 0 chr2 139309165 139309219 -111378635 + (TAA)n Simple_repeat Simple_repeat 1 54 0 19616 50 12 10 chr2 139309621 139312891 -111374963 + L1PA5 LINE L1 2873 6146 -8 30 0 0 0 chr2 139312892 139312922 -111374932 + AT_rich Low_complexity Low_complexity 1 30 0 1957 128 0 4 chr2 139313011 139313322 -111374532 + AluSg SINE Alu 1 310 0 180 200 0 0 chr2 139313480 139313520 -111374334 + (TA)n Simple_repeat Simple_repeat 2 41 0 2231 252 14 23 chr2 139313520 139314039 -111373815 - MLT2B3 LTR ERVL -40 514 1 187 299 190 62 chr2 139314205 139314590 -111373264 - L2 LINE L2 -993 2321 1888 252 130 0 0 chr2 139314604 139314650 -111373204 - LTR66 LTR ERVL -171 439 394 180 111 0 0 chr2 139314770 139314797 -111373057 + (TA)n Simple_repeat Simple_repeat 1 27 0 24 53 0 0 chr2 139314914 139314952 -111372902 + AT_rich Low_complexity Low_complexity 1 38 0 27 73 0 0 chr2 139315482 139315537 -111372317 + AT_rich Low_complexity Low_complexity 1 55 0 180 111 0 0 chr2 139315630 139315657 -111372197 + (TAA)n Simple_repeat Simple_repeat 2 28 0 514 279 71 51 chr2 139315677 139315874 -111371980 - MIR SINE MIR -22 240 40 22 0 0 0 chr2 139318049 139318071 -111369783 + AT_rich Low_complexity Low_complexity 1 22 0 361 340 40 7 chr2 139318351 139318501 -111369353 - MIR3 SINE MIR -27 181 27 2490 295 163 32 chr2 139318795 139320133 -111367721 + L2 LINE L2 896 2478 -836 1535 176 118 0 chr2 139320133 139320456 -111367398 - MER46B DNA MER2_type 0 236 1 2490 295 163 32 chr2 139320456 139320715 -111367139 + L2 LINE L2 2478 2702 -612 409 304 84 37 chr2 139320741 139320955 -111366899 - MIR SINE MIR -11 251 28 2046 86 7 7 chr2 139321360 139321651 -111366203 + AluY SINE Alu 1 291 -20 236 209 30 15 chr2 139322127 139322194 -111365660 + (TAAA)n Simple_repeat Simple_repeat 2 69 0 22 56 0 0 chr2 139322399 139322435 -111365419 + AT_rich Low_complexity Low_complexity 1 36 0 287 219 31 0 chr2 139322648 139322712 -111365142 - MIR SINE MIR -150 112 47 300 336 83 80 chr2 139323730 139324105 -111363749 - L2 LINE L2 -5 3267 2892 184 286 57 0 chr2 139324258 139324328 -111363526 - MIR SINE MIR -59 203 130 6446 44 1 0 chr2 139324432 139325218 -111362636 + L1PA5 LINE L1 5359 6148 -6 189 0 0 0 chr2 139325218 139325239 -111362615 + (TA)n Simple_repeat Simple_repeat 2 22 0 260 305 37 0 chr2 139327070 139327152 -111360702 - L2 LINE L2 0 3313 3229 180 0 0 0 chr2 139328877 139328897 -111358957 + (T)n Simple_repeat Simple_repeat 1 20 0 23 33 0 0 chr2 139329685 139329715 -111358139 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 139330272 139330293 -111357561 + AT_rich Low_complexity Low_complexity 1 21 0 388 262 166 11 chr2 139330383 139330570 -111357284 - L2 LINE L2 0 3313 3098 258 157 0 0 chr2 139331143 139331194 -111356660 + L1MC4 LINE L1 6653 6703 -1339 237 310 0 0 chr2 139331150 139331237 -111356617 - L1MC4 LINE L1 -1339 6703 6617 * 449 243 7 4 chr2 139331239 139331512 -111356342 + (TA)n Simple_repeat Simple_repeat 1 274 0 234 205 0 0 chr2 139331596 139331674 -111356180 + (TA)n Simple_repeat Simple_repeat 1 78 0 317 258 21 0 chr2 139331881 139331974 -111355880 + GA-rich Low_complexity Low_complexity 1 95 0 442 311 15 8 chr2 139334075 139334207 -111353647 + MIR SINE MIR 19 151 -111 180 111 0 0 chr2 139337423 139337450 -111350404 + (GAAA)n Simple_repeat Simple_repeat 3 29 0 1675 237 142 31 chr2 139338163 139338481 -111349373 - L1ME3A LINE L1 -6 6164 5883 213 94 0 0 chr2 139338481 139338513 -111349341 + (TG)n Simple_repeat Simple_repeat 1 32 0 1675 237 142 31 chr2 139338513 139338898 -111348956 - L1ME3A LINE L1 -287 5883 5383 1969 125 0 71 chr2 139338898 139339235 -111348619 - AluSq SINE Alu 0 313 1 217 239 46 78 chr2 139339634 139339736 -111348118 + MER5A DNA MER1_type 61 151 -27 183 327 106 0 chr2 139339805 139339909 -111347945 + L3 LINE CR1 1286 1400 -177 186 250 0 0 chr2 139339939 139339979 -111347875 + L3 LINE CR1 1498 1537 -40 26 82 0 0 chr2 139340516 139340577 -111347277 + AT_rich Low_complexity Low_complexity 1 61 0 2909 151 52 2 chr2 139341049 139341525 -111346329 - LTR3b LTR ERVK 0 500 1 363 23 0 0 chr2 139344245 139344289 -111343565 + (TG)n Simple_repeat Simple_repeat 1 44 0 1528 162 21 136 chr2 139348829 139349218 -111338636 - MER2 DNA MER2_type 0 345 2 180 330 10 72 chr2 139349496 139349593 -111338261 - MIR SINE MIR -170 92 2 181 298 140 0 chr2 139350951 139351008 -111336846 + L3 LINE CR1 969 1033 -544 351 0 0 0 chr2 139351797 139351836 -111336018 + (CA)n Simple_repeat Simple_repeat 2 40 0 1482 161 32 93 chr2 139351864 139351985 -111335869 + MLT1B LTR MaLR 3 130 -260 1929 125 6 75 chr2 139351985 139352320 -111335534 + AluSx SINE Alu 1 312 0 1482 161 32 93 chr2 139352320 139352608 -111335246 + MLT1B LTR MaLR 130 387 -3 1894 190 43 22 chr2 139352612 139353188 -111334666 + MLT1B-int LTR MaLR 2 709 -662 1424 196 65 14 chr2 139353322 139353613 -111334241 + AluJb SINE Alu 3 308 -4 337 303 91 15 chr2 139354013 139354145 -111333709 + MIR SINE MIR 20 161 -101 359 253 22 0 chr2 139355140 139355231 -111332623 + MIR3 SINE MIR 76 168 -40 227 103 26 0 chr2 139355461 139355500 -111332354 + (TA)n Simple_repeat Simple_repeat 2 41 0 873 290 18 72 chr2 139355519 139355919 -111331935 - L2 LINE L2 0 3313 2936 327 275 42 7 chr2 139356019 139356161 -111331693 + L1ME4a LINE L1 5899 6045 -76 400 275 51 14 chr2 139357784 139357922 -111329932 + MIR SINE MIR 108 250 -12 281 219 55 0 chr2 139359258 139359331 -111328523 - MLT1I LTR MaLR -19 390 314 25 31 0 0 chr2 139359618 139359650 -111328204 + AT_rich Low_complexity Low_complexity 1 32 0 237 282 0 0 chr2 139359757 139359772 -111328082 + A-rich Low_complexity Low_complexity 1 15 -63 2046 148 0 6 chr2 139359772 139360083 -111327771 + AluSc SINE Alu 1 309 0 237 282 0 0 chr2 139360083 139360145 -111327709 + A-rich Low_complexity Low_complexity 14 78 0 214 279 144 27 chr2 139360226 139360337 -111327517 - MIR SINE MIR -102 160 37 251 204 0 0 chr2 139360593 139360647 -111327207 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 2002 119 0 17 chr2 139361682 139362025 -111325829 + AluSg SINE Alu 1 338 0 22 0 0 0 chr2 139362911 139362933 -111324921 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 139363878 139363906 -111323948 + AT_rich Low_complexity Low_complexity 1 28 0 265 293 121 45 chr2 139364032 139364189 -111323665 + MIR SINE MIR 66 234 -28 320 54 0 54 chr2 139364419 139364475 -111323379 + (T)n Simple_repeat Simple_repeat 1 53 0 24 32 0 0 chr2 139365531 139365562 -111322292 + AT_rich Low_complexity Low_complexity 1 31 0 274 312 112 16 chr2 139365732 139365857 -111321997 + MER5A DNA MER1_type 7 143 -46 252 184 0 0 chr2 139366145 139366194 -111321660 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 26 30 0 0 chr2 139367268 139367301 -111320553 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr2 139368157 139368187 -111319667 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 139371080 139371101 -111316753 + AT_rich Low_complexity Low_complexity 1 21 0 27 49 0 0 chr2 139372030 139372071 -111315783 + AT_rich Low_complexity Low_complexity 1 41 0 626 315 98 40 chr2 139372386 139372901 -111314953 - L2 LINE L2 -12 3301 2752 235 297 45 71 chr2 139373290 139373445 -111314409 + L2 LINE L2 2224 2374 -940 184 280 40 0 chr2 139374040 139374090 -111313764 + L2 LINE L2 3262 3313 0 430 301 72 38 chr2 139374247 139374456 -111313398 - MIR SINE MIR -44 218 3 25 31 0 0 chr2 139374797 139374829 -111313025 + AT_rich Low_complexity Low_complexity 1 32 0 319 362 17 6 chr2 139376378 139376554 -111311300 - MIR SINE MIR -67 141 2 210 171 0 0 chr2 139376966 139377001 -111310853 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1034 250 4 8 chr2 139377591 139377831 -111310023 + L1PB4 LINE L1 5892 6130 -26 183 42 0 0 chr2 139378759 139378783 -111309071 + (TAGA)n Simple_repeat Simple_repeat 3 26 0 3119 140 76 9 chr2 139379059 139379636 -111308218 + L1MA6 LINE L1 5661 6276 -24 25 0 0 0 chr2 139383178 139383203 -111304651 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr2 139383926 139383959 -111303895 + AT_rich Low_complexity Low_complexity 1 33 0 465 246 51 29 chr2 139386179 139386317 -111301537 - MER20 DNA MER1_type -78 141 1 180 248 26 97 chr2 139387182 139387295 -111300559 + MER5C DNA MER1_type 80 184 -140 304 232 0 53 chr2 139388086 139388181 -111299673 + L1MC4 LINE L1 6614 6703 -1339 336 126 35 0 chr2 139388184 139388271 -111299583 + (TA)n Simple_repeat Simple_repeat 2 91 0 318 264 11 11 chr2 139388272 139388363 -111299491 + L1MC4 LINE L1 6615 6705 -1337 305 221 21 42 chr2 139388371 139388466 -111299388 + L1MC4 LINE L1 6613 6705 -1337 317 180 31 0 chr2 139388477 139388605 -111299249 + (TA)n Simple_repeat Simple_repeat 2 133 0 297 125 0 0 chr2 139388919 139388975 -111298879 + (CA)n Simple_repeat Simple_repeat 2 57 0 26 0 0 0 chr2 139389371 139389397 -111298457 + AT_rich Low_complexity Low_complexity 1 26 0 433 339 31 31 chr2 139389743 139390062 -111297792 - HAL1b LINE L1 -620 728 410 23 0 0 0 chr2 139390706 139390729 -111297125 + AT_rich Low_complexity Low_complexity 1 23 0 6911 48 7 30 chr2 139396882 139398103 -111289751 + L1PA5 LINE L1 4951 6149 -5 1734 146 39 83 chr2 139398221 139398584 -111289270 + Tigger3(Golem) DNA MER2_type 2 348 -2681 2201 254 52 8 chr2 139400085 139400679 -111287175 - MLT1E2 LTR MaLR 0 626 7 333 369 60 23 chr2 139402486 139402674 -111285180 + ERVL LTR ERVL 1492 1672 -4092 1800 183 30 3 chr2 139402674 139403007 -111284847 + MER2 DNA MER2_type 2 343 -1 333 369 60 23 chr2 139403007 139403170 -111284684 + ERVL LTR ERVL 1672 1856 -3908 571 357 54 14 chr2 139403330 139403923 -111283931 + ERVL LTR ERVL 2027 2688 -2861 4208 108 8 26 chr2 139404285 139404579 -111283275 + MER41B LTR ERV1 1 299 -336 1826 128 49 33 chr2 139404579 139404884 -111282970 + AluSg SINE Alu 1 310 0 4208 108 8 26 chr2 139404884 139405236 -111282618 + MER41B LTR ERV1 299 635 0 22 0 0 0 chr2 139406807 139406829 -111281025 + AT_rich Low_complexity Low_complexity 1 22 0 5638 121 23 23 chr2 139408209 139409161 -111278693 - L1PA15 LINE L1 -1 6164 5198 1558 190 57 0 chr2 139409161 139409440 -111278414 - AluJb SINE Alu -15 297 3 5638 121 23 23 chr2 139409440 139409709 -111278145 - L1PA15 LINE L1 -966 5199 4931 1547 203 49 9 chr2 139409709 139410059 -111277795 + MLT1A1 LTR MaLR 2 365 0 24 0 0 0 chr2 139411476 139411500 -111276354 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 139412075 139412099 -111275755 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 139412609 139412630 -111275224 + AT_rich Low_complexity Low_complexity 1 21 0 435 311 51 31 chr2 139412699 139412880 -111274974 + MLT1H LTR MaLR 153 337 -212 1054 134 25 0 chr2 139412880 139413037 -111274817 + Charlie3 DNA MER1_type 1 161 -2549 * 7587 93 17 3 chr2 139413035 139414059 -111273795 + Charlie3 DNA MER1_type 1239 2276 -434 238 67 0 0 chr2 139414048 139414078 -111273776 + Charlie3 DNA MER1_type 2092 2121 -589 * 3900 122 49 2 chr2 139414085 139414682 -111273172 + Charlie3 DNA MER1_type 2082 2706 -4 618 215 45 20 chr2 139414699 139414852 -111273002 + MLT1H LTR MaLR 404 549 0 26 0 0 0 chr2 139415831 139415857 -111271997 + AT_rich Low_complexity Low_complexity 1 26 0 200 94 31 0 chr2 139416387 139416419 -111271435 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 384 317 94 50 chr2 139417056 139417416 -111270438 - L2 LINE L2 -55 3258 2883 289 211 0 28 chr2 139417497 139417568 -111270286 - MLT1F LTR MaLR -5 537 469 228 149 64 0 chr2 139417598 139417645 -111270209 + CT-rich Low_complexity Low_complexity 3 52 0 223 268 28 14 chr2 139417739 139417810 -111270044 + MIR SINE MIR 173 244 -18 6953 135 30 2 chr2 139418738 139419994 -111267860 + HSMAR2 DNA Mariner 11 1300 -2 201 178 0 0 chr2 139420826 139420871 -111266983 + CT-rich Low_complexity Low_complexity 2 46 0 749 278 163 57 chr2 139422619 139423073 -111264781 - L2 LINE L2 -8 3305 2804 208 221 39 0 chr2 139423231 139423308 -111264546 + (TA)n Simple_repeat Simple_repeat 1 80 0 2109 114 24 0 chr2 139424242 139424531 -111263323 - AluSx SINE Alu -16 296 1 182 289 0 0 chr2 139426080 139426125 -111261729 - L2 LINE L2 -19 3253 3209 181 276 235 20 chr2 139426153 139426251 -111261603 - MIR SINE MIR -123 139 21 511 308 132 36 chr2 139427370 139428077 -111259777 - L2 LINE L2 0 3313 2453 1955 197 12 12 chr2 139430124 139430540 -111257314 - L1MB5 LINE L1 0 6174 5759 256 202 18 18 chr2 139431936 139432050 -111255804 + (CA)n Simple_repeat Simple_repeat 1 114 0 651 304 78 36 chr2 139433490 139433822 -111254032 - L2 LINE L2 -4 3309 2964 307 357 21 36 chr2 139435290 139435430 -111252424 - L2 LINE L2 -1 3271 3134 449 349 33 9 chr2 139435766 139435981 -111251873 - MIR SINE MIR -14 248 29 279 0 0 0 chr2 139436599 139436630 -111251224 + (TG)n Simple_repeat Simple_repeat 2 32 0 181 49 0 98 chr2 139437603 139437644 -111250210 + (CAAAAA)n Simple_repeat Simple_repeat 3 39 0 190 329 59 12 chr2 139438842 139438927 -111248927 + MIR SINE MIR 173 261 -1 315 71 0 0 chr2 139439732 139439774 -111248080 + (TG)n Simple_repeat Simple_repeat 1 42 0 2051 103 0 40 chr2 139440104 139440405 -111247449 + AluY SINE Alu 1 289 -22 856 267 99 43 chr2 139442316 139443044 -111244810 + L2 LINE L2 2471 3313 0 442 396 57 36 chr2 139443444 139443863 -111243991 - L2 LINE L2 -9 3263 2836 193 284 136 12 chr2 139444188 139444269 -111243585 + MIR SINE MIR 67 157 -105 27 73 0 0 chr2 139444326 139444381 -111243473 + AT_rich Low_complexity Low_complexity 1 55 0 243 334 62 58 chr2 139444737 139445045 -111242809 - L2 LINE L2 0 3313 3005 385 363 56 38 chr2 139445047 139445386 -111242468 - L2 LINE L2 -449 2865 2521 1760 195 78 27 chr2 139445433 139445844 -111242010 - MSTB1 LTR MaLR 0 432 1 342 45 0 0 chr2 139445873 139445917 -111241937 + (TG)n Simple_repeat Simple_repeat 2 45 0 1529 276 54 36 chr2 139446279 139446833 -111241021 - MLT1E LTR MaLR 0 593 30 1746 153 6 34 chr2 139446910 139447231 -111240623 - Tigger4(Zombi) DNA MER2_type 0 2731 2420 537 121 23 38 chr2 139447231 139447363 -111240491 + CT-rich Low_complexity Low_complexity 2 131 0 210 118 0 0 chr2 139447366 139447400 -111240454 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 790 150 0 37 chr2 139447409 139447596 -111240258 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1936 143 16 16 chr2 139447605 139447913 -111239941 - AluSg SINE Alu 0 310 3 726 122 30 15 chr2 139447920 139448051 -111239803 - Tigger4(Zombi) DNA MER2_type -302 2429 2297 476 231 0 0 chr2 139448053 139448144 -111239710 - Tigger4(Zombi) DNA MER2_type -2477 254 164 262 338 67 45 chr2 139448669 139448923 -111238931 + LTR16B LTR ERVL 121 451 -13 285 372 54 8 chr2 139449029 139449158 -111238696 + L2 LINE L2 3124 3258 -14 1189 287 58 54 chr2 139449513 139449912 -111237942 - MLT1E LTR MaLR -13 580 176 2468 46 0 0 chr2 139449912 139450219 -111237635 - AluY SINE Alu 0 307 1 1189 287 58 54 chr2 139450219 139450375 -111237479 - MLT1E LTR MaLR -417 176 22 195 204 20 0 chr2 139450446 139450495 -111237359 - MIR SINE MIR -4 258 209 227 319 125 0 chr2 139450578 139450650 -111237204 - L2 LINE L2 -17 3296 3216 885 183 43 62 chr2 139451981 139452189 -111235665 + MER20 DNA MER1_type 16 219 0 1226 259 11 69 chr2 139452783 139453162 -111234692 + MLT1A1 LTR MaLR 1 357 -8 1202 186 147 0 chr2 139453725 139454004 -111233850 - L1M2 LINE L1 -614 5677 5358 6061 102 17 9 chr2 139454004 139455136 -111232718 - L1PA11 LINE L1 0 6174 5055 12833 163 11 15 chr2 139455136 139457533 -111230321 + L1P LINE L1 2730 5117 -1029 199 328 0 16 chr2 139457534 139457598 -111230256 + L2 LINE L2 3015 3077 -195 190 342 53 26 chr2 139457668 139457744 -111230110 + L2 LINE L2 3168 3245 -27 358 239 62 62 chr2 139459181 139459482 -111228372 - L1MD3 LINE L1 -1197 6611 6311 1993 101 10 28 chr2 139459482 139459798 -111228056 - AluY SINE Alu 0 311 1 358 239 62 62 chr2 139459798 139460193 -111227661 - L1MD3 LINE L1 -1496 6312 5967 267 31 0 0 chr2 139460197 139460229 -111227625 + (TA)n Simple_repeat Simple_repeat 2 33 0 198 0 0 0 chr2 139460273 139460295 -111227559 + (TG)n Simple_repeat Simple_repeat 2 23 0 455 325 55 18 chr2 139461609 139461772 -111226082 - MIR SINE MIR -21 241 73 1150 242 42 37 chr2 139461874 139462275 -111225579 - L1MA9 LINE L1 -38 6274 5872 242 338 121 36 chr2 139462476 139462781 -111225073 - L2 LINE L2 -1 3312 2982 257 182 0 0 chr2 139462836 139462880 -111224974 + MADE1 DNA Mariner 36 79 -1 255 328 172 11 chr2 139462909 139463083 -111224771 + MIR SINE MIR 16 217 -45 2021 209 50 44 chr2 139463225 139463722 -111224132 + MLT1D LTR MaLR 1 500 -5 815 189 62 33 chr2 139463971 139464214 -111223640 - MER69 DNA AcHobo -12 2514 2265 378 299 10 0 chr2 139464206 139464303 -111223551 - MER69 DNA AcHobo -2428 98 1 * 2433 103 47 6 chr2 139464606 139464947 -111222907 + THE1A LTR MaLR 1 355 0 3041 108 11 4 chr2 139464947 139465399 -111222455 + THE1A-int LTR MaLR 1 455 -1125 610 305 115 28 chr2 139465550 139465914 -111221940 - LTR16A1 LTR ERVL 0 457 62 4704 170 105 1 chr2 139466017 139466933 -111220921 + Tigger1 DNA MER2_type 26 1036 -1382 2787 163 47 15 chr2 139466932 139467342 -111220512 + Tigger1 DNA MER2_type 1874 2306 -112 * 1809 218 101 76 chr2 139467342 139468148 -111219706 - LTR1B LTR ERV1 0 826 1 2787 163 47 15 chr2 139468148 139468265 -111219589 + Tigger1 DNA MER2_type 2306 2418 0 464 273 83 58 chr2 139468281 139468692 -111219162 - LTR52 LTR ERVL 0 421 1 385 303 45 57 chr2 139468693 139468730 -111219124 - L1MEd LINE L1 -5578 541 505 2913 122 7 2 chr2 139468730 139469171 -111218683 + MER65A LTR ERV1 1 443 -2 385 303 45 57 chr2 139469171 139469397 -111218457 - L1MEd LINE L1 -5614 505 281 202 208 0 21 chr2 139469547 139469595 -111218259 + (TG)n Simple_repeat Simple_repeat 2 48 0 36 70 0 0 chr2 139469888 139469959 -111217895 + AT_rich Low_complexity Low_complexity 1 71 0 25 0 0 0 chr2 139472657 139472682 -111215172 + AT_rich Low_complexity Low_complexity 1 25 0 959 249 110 52 chr2 139472981 139473326 -111214528 + MLT1A1 LTR MaLR 1 365 0 861 171 41 0 chr2 139473803 139473973 -111213881 + AluSq SINE Alu 121 297 -16 545 173 89 78 chr2 139474749 139474816 -111213038 + L1MA9 LINE L1 6095 6160 -152 1606 191 10 14 chr2 139474816 139475110 -111212744 + AluJo SINE Alu 1 293 -19 545 173 89 78 chr2 139475110 139475221 -111212633 + L1MA9 LINE L1 6160 6275 -37 189 0 0 0 chr2 139475594 139475615 -111212239 + (TA)n Simple_repeat Simple_repeat 1 21 0 1969 137 10 3 chr2 139475615 139475908 -111211946 - AluSq SINE Alu -18 295 1 221 319 0 43 chr2 139476045 139476186 -111211668 + A-rich Low_complexity Low_complexity 3 137 0 32 75 0 0 chr2 139476582 139476649 -111211205 + AT_rich Low_complexity Low_complexity 1 67 0 231 88 0 0 chr2 139476653 139476687 -111211167 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 21 0 0 0 chr2 139476826 139476847 -111211007 + AT_rich Low_complexity Low_complexity 1 21 0 414 179 45 0 chr2 139476905 139477017 -111210837 + CT-rich Low_complexity Low_complexity 2 118 0 38 75 0 0 chr2 139477663 139477743 -111210111 + AT_rich Low_complexity Low_complexity 1 80 0 2253 73 7 10 chr2 139478162 139478463 -111209391 - AluY SINE Alu -11 300 1 21 0 0 0 chr2 139480414 139480435 -111207419 + AT_rich Low_complexity Low_complexity 1 21 0 5017 157 27 21 chr2 139481549 139482131 -111205723 - Tigger1 DNA MER2_type -4 2414 1822 2095 120 3 3 chr2 139482131 139482440 -111205414 - AluSx SINE Alu -3 309 1 5017 157 27 21 chr2 139482440 139482774 -111205080 - Tigger1 DNA MER2_type -596 1822 1492 5744 169 56 22 chr2 139482887 139484005 -111203849 - Tigger1 DNA MER2_type -1210 1208 53 260 88 0 0 chr2 139484007 139484041 -111203813 + U2 snRNA snRNA 2 35 -153 237 259 17 0 chr2 139484041 139484099 -111203755 - Tigger1 DNA MER2_type -2358 60 2 1292 234 25 118 chr2 139484620 139485228 -111202626 + L1MC4 LINE L1 6503 7053 -989 1506 289 118 0 chr2 139485259 139485817 -111202037 + L1MC4 LINE L1 7238 7861 -181 198 0 0 0 chr2 139485856 139485878 -111201976 + (GA)n Simple_repeat Simple_repeat 1 22 0 1278 170 7 19 chr2 139486687 139486957 -111200897 + L1MA4 LINE L1 6023 6289 -11 22 70 0 0 chr2 139487151 139487194 -111200660 + AT_rich Low_complexity Low_complexity 1 43 0 239 263 13 0 chr2 139487244 139487320 -111200534 + (TA)n Simple_repeat Simple_repeat 1 77 0 1282 251 30 59 chr2 139487338 139487812 -111200042 - MLT1C LTR MaLR -2 465 6 252 135 0 0 chr2 139488121 139488158 -111199696 + AluJ/FLAM SINE Alu 21 57 -245 215 191 43 0 chr2 139488258 139488305 -111199549 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 447 343 39 13 chr2 139489814 139490047 -111197807 + MIR SINE MIR 11 249 -13 230 188 38 38 chr2 139491274 139491354 -111196500 + (TAAA)n Simple_repeat Simple_repeat 1 80 0 21 0 0 0 chr2 139492444 139492465 -111195389 + AT_rich Low_complexity Low_complexity 1 21 0 5734 145 29 15 chr2 139492963 139493244 -111194610 + L1MA4 LINE L1 5132 5408 -892 2237 107 0 0 chr2 139493244 139493542 -111194312 + AluSx SINE Alu 1 298 -14 186 43 0 0 chr2 139493542 139493565 -111194289 + (GA)n Simple_repeat Simple_repeat 2 24 0 5734 145 29 15 chr2 139493565 139494410 -111193444 + L1MA4 LINE L1 5407 6278 -22 378 294 82 18 chr2 139494460 139494630 -111193224 - MLT1I LTR MaLR -3 406 226 1624 263 61 11 chr2 139494951 139495492 -111192362 - L1MC4a LINE L1 -1923 5885 5318 1953 122 3 27 chr2 139495649 139495943 -111191911 - AluSx SINE Alu -23 289 3 207 270 81 14 chr2 139496243 139496317 -111191537 + MIR SINE MIR 74 144 -64 2170 153 42 47 chr2 139496711 139497141 -111190713 - MSTC LTR MaLR 0 428 1 21 0 0 0 chr2 139497430 139497451 -111190403 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 139497675 139497712 -111190142 + AT_rich Low_complexity Low_complexity 1 37 0 30 27 0 0 chr2 139499264 139499301 -111188553 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 139499458 139499486 -111188368 + AT_rich Low_complexity Low_complexity 1 28 0 343 294 80 43 chr2 139501645 139501832 -111186022 - MIR SINE MIR -12 250 57 233 57 29 0 chr2 139504073 139504108 -111183746 + (TA)n Simple_repeat Simple_repeat 1 36 0 295 212 28 50 chr2 139504358 139504537 -111183317 + C-rich Low_complexity Low_complexity 2 176 0 2050 164 16 8 chr2 139505145 139505528 -111182326 + L1MC3 LINE L1 7400 7785 0 287 363 0 52 chr2 139505528 139505663 -111182191 - MIR3 SINE MIR -26 182 55 297 0 0 0 chr2 139505871 139505904 -111181950 + (TG)n Simple_repeat Simple_repeat 2 34 0 235 214 0 0 chr2 139506185 139506241 -111181613 + L1MC4 LINE L1 6650 6705 -1337 2496 143 14 114 chr2 139506339 139506821 -111181033 - Tigger2 DNA MER2_type 0 2718 1 2635 48 0 0 chr2 139507302 139507613 -111180241 - AluY SINE Alu 0 311 1 201 171 0 0 chr2 139508626 139508661 -111179193 + A-rich Low_complexity Low_complexity 1 35 0 234 0 0 0 chr2 139509904 139509930 -111177924 + (TA)n Simple_repeat Simple_repeat 2 27 0 252 0 0 0 chr2 139510157 139510185 -111177669 + (TA)n Simple_repeat Simple_repeat 2 29 0 257 332 68 42 chr2 139510193 139510383 -111177471 - MIR SINE MIR -40 222 28 37 0 0 0 chr2 139511748 139511785 -111176069 + AT_rich Low_complexity Low_complexity 1 37 0 202 95 48 0 chr2 139512767 139512809 -111175045 + CT-rich Low_complexity Low_complexity 3 46 0 1889 187 74 20 chr2 139514319 139514725 -111173129 + MSTA LTR MaLR 1 428 0 440 243 83 0 chr2 139515658 139515802 -111172052 - L1MC4a LINE L1 -1964 5844 5689 262 317 24 98 chr2 139515912 139516017 -111171837 + MARNA DNA Mariner 292 380 -206 2035 111 11 0 chr2 139516017 139516331 -111171523 + AluSp SINE Alu 1 317 0 262 317 24 98 chr2 139516331 139516427 -111171427 + MARNA DNA Mariner 380 481 -105 1764 153 3 31 chr2 139517028 139517348 -111170506 - AluJb SINE Alu -1 311 1 286 280 75 21 chr2 139520262 139520355 -111167499 - L2 LINE L2 -4 3268 3171 1722 192 34 3 chr2 139520717 139521071 -111166783 + L1M2 LINE L1 5313 5677 -635 1371 114 5 5 chr2 139521071 139521281 -111166573 - pTR5 LTR ERV1 -2057 381 172 286 216 41 21 chr2 139521284 139521381 -111166473 - LTR30 LTR ERV1 -80 642 544 3621 119 82 82 chr2 139521381 139522340 -111165514 - pTR5 LTR ERV1 -413 2025 766 7368 129 8 28 chr2 139522441 139523614 -111164240 + THE1A-int LTR MaLR 425 1573 -7 2538 90 12 3 chr2 139523614 139523960 -111163894 + THE1A LTR MaLR 7 355 0 582 268 34 34 chr2 139525146 139525355 -111162499 - MARNA DNA Mariner -179 407 199 30 45 0 0 chr2 139525523 139525567 -111162287 + AT_rich Low_complexity Low_complexity 1 44 0 1905 135 0 61 chr2 139526830 139527157 -111160697 + AluSx SINE Alu 1 307 -5 564 0 40 0 chr2 139528085 139528161 -111159693 + (TAGA)n Simple_repeat Simple_repeat 1 79 0 2161 162 44 9 chr2 139529422 139529855 -111157999 - L1PA15 LINE L1 0 6165 5718 615 380 32 34 chr2 139530373 139530844 -111157010 - L2 LINE L2 -1986 1328 859 199 277 277 0 chr2 139530969 139531052 -111156802 - MER5A DNA MER1_type -7 182 77 30 45 0 0 chr2 139531771 139531815 -111156039 + AT_rich Low_complexity Low_complexity 1 44 0 1445 136 0 33 chr2 139531851 139532093 -111155761 + AluSg/x SINE Alu 67 300 -10 597 64 0 0 chr2 139532101 139532179 -111155675 + (GGAA)n Simple_repeat Simple_repeat 2 79 0 242 200 18 0 chr2 139533651 139533706 -111154148 - MLT1I LTR MaLR -35 374 319 275 304 13 25 chr2 139533762 139533841 -111154013 - MLT1I LTR MaLR -107 302 225 22 0 0 0 chr2 139534191 139534213 -111153641 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 139534605 139534627 -111153227 + AT_rich Low_complexity Low_complexity 1 22 0 2834 13 0 0 chr2 139534826 139535143 -111152711 - AluYb8 SINE Alu -1 317 1 373 374 16 0 chr2 139535185 139535308 -111152546 - MER5B DNA MER1_type -52 126 2 230 324 42 0 chr2 139535355 139535426 -111152428 + MER5A DNA MER1_type 36 109 -80 184 340 62 10 chr2 139537079 139537176 -111150678 - MIR SINE MIR -90 172 71 483 253 157 6 chr2 139537185 139537363 -111150491 - MIR SINE MIR -21 241 37 241 340 52 33 chr2 139537847 139538000 -111149854 + L2 LINE L2 2704 2859 -455 2015 120 3 0 chr2 139538103 139538402 -111149452 - AluSx SINE Alu -12 300 1 2190 88 0 7 chr2 139538546 139538852 -111149002 + AluY SINE Alu 1 304 -7 211 194 0 0 chr2 139539123 139539159 -111148695 + CT-rich Low_complexity Low_complexity 4 39 0 1738 98 0 0 chr2 139539160 139539394 -111148460 - AluSc SINE Alu -75 234 1 220 294 130 11 chr2 139541548 139541640 -111146214 - L2 LINE L2 -1 3271 3169 1850 224 53 27 chr2 139543617 139544167 -111143687 + L1MB8 LINE L1 5614 6177 -1 279 146 0 0 chr2 139545289 139545344 -111142510 + (TC)n Simple_repeat Simple_repeat 2 56 0 342 0 0 0 chr2 139545344 139545382 -111142472 + (CA)n Simple_repeat Simple_repeat 1 38 0 236 330 29 10 chr2 139545389 139545492 -111142362 - MIR SINE MIR -154 108 4 305 417 48 8 chr2 139546140 139546392 -111141462 - L2 LINE L2 -686 2628 2367 188 300 164 18 chr2 139546452 139546562 -111141292 + L3b LINE CR1 1388 1513 -70 24 32 0 0 chr2 139547050 139547081 -111140773 + AT_rich Low_complexity Low_complexity 1 31 0 2005 244 112 30 chr2 139548299 139549293 -111138561 - Charlie2 DNA MER1_type 0 2862 1788 1292 240 59 43 chr2 139549294 139549873 -111137981 - MER69 DNA AcHobo -1 2525 1938 257 315 47 20 chr2 139549872 139550021 -111137833 - MER69 DNA AcHobo -1549 977 825 * 1966 199 11 3 chr2 139550022 139550384 -111137470 - MLT1A1 LTR MaLR 0 365 1 3276 220 49 61 chr2 139550385 139551723 -111136131 - MLT1A1-int LTR MaLR -1 1370 11 1325 203 8 4 chr2 139551734 139551980 -111135874 - MLT1A1 LTR MaLR 0 365 119 21 36 0 0 chr2 139552356 139552384 -111135470 + AT_rich Low_complexity Low_complexity 1 28 0 323 283 67 17 chr2 139552462 139552582 -111135272 - MIR SINE MIR -108 154 29 342 358 47 22 chr2 139552671 139552903 -111134951 + MIR SINE MIR 13 250 -12 610 110 10 30 chr2 139553205 139553305 -111134549 + MER4A LTR ERV1 1 98 -566 * 1446 158 7 25 chr2 139553301 139553606 -111134248 + MER4A LTR ERV1 257 615 -49 195 42 0 0 chr2 139553606 139553630 -111134224 + (TAAAAA)n Simple_repeat Simple_repeat 5 28 0 787 268 82 21 chr2 139555537 139555828 -111132026 - MER93b LTR ERV1 0 373 65 3678 109 13 6 chr2 139556096 139556646 -111131208 + MER41A LTR ERV1 1 554 0 25 83 0 0 chr2 139556828 139556888 -111130966 + AT_rich Low_complexity Low_complexity 1 60 0 21 0 0 0 chr2 139557494 139557515 -111130339 + AT_rich Low_complexity Low_complexity 1 21 0 1291 206 93 20 chr2 139557525 139557922 -111129932 + LTR37A LTR ERV1 1 426 0 21 0 0 0 chr2 139557981 139558002 -111129852 + AT_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr2 139558140 139558182 -111129672 + AT_rich Low_complexity Low_complexity 1 42 0 563 90 0 0 chr2 139558221 139558299 -111129555 - Alu SINE Alu -12 297 220 2118 91 0 4 chr2 139558300 139558576 -111129278 + AluSx SINE Alu 11 285 -27 325 333 50 0 chr2 139559161 139559260 -111128594 - L2 LINE L2 0 3313 3210 236 381 66 17 chr2 139559301 139559482 -111128372 + L2 LINE L2 2890 3079 -234 468 232 45 9 chr2 139559789 139559901 -111127953 + MER5A DNA MER1_type 74 189 0 22 0 0 0 chr2 139560553 139560575 -111127279 + AT_rich Low_complexity Low_complexity 1 22 0 2220 115 6 10 chr2 139560713 139561025 -111126829 + AluSx SINE Alu 1 311 -1 204 235 39 10 chr2 139561050 139561152 -111126702 + (TTAAA)n Simple_repeat Simple_repeat 1 105 0 233 333 12 0 chr2 139561232 139561316 -111126538 - L1MC/D LINE L1 -2211 5597 5513 2087 87 45 3 chr2 139561539 139561828 -111126026 + AluSc SINE Alu 1 301 -8 25 0 0 0 chr2 139561839 139561864 -111125990 + AT_rich Low_complexity Low_complexity 1 25 0 5427 148 11 9 chr2 139562421 139563419 -111124435 + L1PA15 LINE L1 5163 6162 -3 442 330 131 23 chr2 139563458 139563764 -111124090 + MLT1E LTR MaLR 11 349 -244 1980 121 0 0 chr2 139563780 139564052 -111123802 + AluSq SINE Alu 1 272 -41 379 299 123 36 chr2 139564192 139565043 -111122811 - L1M4 LINE L1 -3091 3055 2131 536 241 110 63 chr2 139565049 139565111 -111122743 - L1MC5 LINE L1 -34 7927 7869 1496 245 96 25 chr2 139565111 139565592 -111122262 + LTR40a LTR ERVL 4 518 -1 536 241 110 63 chr2 139565592 139565939 -111121915 - L1MC5 LINE L1 -92 7869 7499 494 300 0 0 chr2 139565963 139566083 -111121771 - MER5B DNA MER1_type -14 164 45 527 281 44 20 chr2 139566188 139566366 -111121488 - L1MC5 LINE L1 -509 7452 7265 207 0 0 0 chr2 139566366 139566389 -111121465 + (TTA)n Simple_repeat Simple_repeat 1 23 0 527 281 44 20 chr2 139566389 139566459 -111121395 - L1MC5 LINE L1 -696 7265 7198 664 217 50 108 chr2 139566491 139566888 -111120966 - L1MC5 LINE L1 -898 7063 6690 300 306 22 30 chr2 139566966 139567100 -111120754 - L1MC4a LINE L1 -1299 6509 6377 1424 145 8 0 chr2 139567106 139567341 -111120513 + AluSx SINE Alu 1 237 -75 363 377 0 7 chr2 139567441 139567595 -111120259 - MIR3 SINE MIR -18 190 38 215 286 0 0 chr2 139567864 139567906 -111119948 - L3 LINE CR1 -517 1060 1019 22 70 0 0 chr2 139567999 139568042 -111119812 + AT_rich Low_complexity Low_complexity 1 43 0 1192 327 81 74 chr2 139568061 139569042 -111118812 - L3 LINE CR1 -29 1548 562 473 209 0 0 chr2 139569486 139569572 -111118282 - L1M1 LINE L1 -774 5529 5444 287 140 0 0 chr2 139569574 139569624 -111118230 + L1MA4A LINE L1 6073 6122 -181 457 176 22 0 chr2 139569627 139569718 -111118136 + L1MA4A LINE L1 6189 6281 -22 196 256 134 12 chr2 139570200 139570282 -111117572 - L3b LINE CR1 -252 1331 1240 1865 173 0 0 chr2 139570966 139571267 -111116587 - AluSx SINE Alu -11 301 1 1914 96 0 0 chr2 139571278 139571529 -111116325 - AluY SINE Alu -6 305 55 344 358 32 8 chr2 139571778 139571901 -111115953 + L2 LINE L2 3147 3272 0 313 264 66 0 chr2 139571916 139572022 -111115832 + MIR SINE MIR 137 249 -13 2214 152 142 50 chr2 139572261 139572741 -111115113 + MER1A DNA MER1_type 4 527 0 630 316 47 20 chr2 139573401 139573429 -111114425 - LTR16A1 LTR ERVL 0 457 431 207 0 0 0 chr2 139573429 139573452 -111114402 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 630 316 47 20 chr2 139573452 139573724 -111114130 - LTR16A1 LTR ERVL -26 431 149 23 0 0 0 chr2 139574388 139574411 -111113443 + AT_rich Low_complexity Low_complexity 1 23 0 1904 98 9 98 chr2 139574627 139574955 -111112899 + AluSc SINE Alu 1 299 -10 2273 132 8 8 chr2 139575482 139575837 -111112017 + THE1A LTR MaLR 1 355 0 4290 82 11 34 chr2 139575837 139576260 -111111594 + THE1A-int LTR MaLR 1 407 -1173 2044 126 3 22 chr2 139576260 139576578 -111111276 - AluSx SINE Alu 0 312 1 4290 82 11 34 chr2 139576578 139576779 -111111075 + THE1A-int LTR MaLR 407 611 -969 507 101 0 0 chr2 139576782 139576851 -111111003 + THE1A LTR MaLR 287 355 0 255 246 0 0 chr2 139577015 139577072 -111110782 + CT-rich Low_complexity Low_complexity 4 60 0 21 0 0 0 chr2 139577303 139577324 -111110530 + AT_rich Low_complexity Low_complexity 1 21 0 213 211 0 0 chr2 139578899 139578937 -111108917 + GA-rich Low_complexity Low_complexity 2 39 0 1421 251 11 18 chr2 139579125 139579507 -111108347 - L1MA10 LINE L1 -24 6310 5932 3075 117 2 4 chr2 139579513 139579974 -111107880 - L1PA13 LINE L1 -2 6161 5702 2431 102 6 0 chr2 139579974 139580338 -111107516 + L1P4 LINE L1 5295 5660 -503 2162 170 13 0 chr2 139580333 139580715 -111107139 - L1MA10 LINE L1 -245 5944 5558 * 3874 203 52 156 chr2 139580919 139582498 -111105356 + L1MCa LINE L1 16 1757 -4669 2117 158 25 0 chr2 139582498 139582853 -111105001 - THE1B LTR MaLR 0 364 1 9029 103 38 97 chr2 139582853 139584531 -111103323 - THE1B-int LTR MaLR 0 1580 1 2224 137 31 0 chr2 139584533 139584884 -111102970 - THE1B LTR MaLR -2 362 1 3874 203 52 156 chr2 139584884 139585137 -111102717 + L1MCa LINE L1 1384 1662 -4764 350 297 59 25 chr2 139585137 139585255 -111102599 + FLAM_A SINE Alu 1 122 -11 396 139 19 9 chr2 139585259 139585367 -111102487 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 291 326 37 0 chr2 139585430 139585648 -111102206 + L1MCa LINE L1 1750 1975 -4451 570 237 62 0 chr2 139585828 139586022 -111101832 + L1MCa LINE L1 2033 2238 -4188 809 300 65 38 chr2 139587304 139587819 -111100035 + L2 LINE L2 2557 3101 -212 2147 189 19 5 chr2 139587819 139588237 -111099617 + MSTB LTR MaLR 1 424 -2 809 300 65 38 chr2 139588237 139588451 -111099403 + L2 LINE L2 3101 3308 -5 287 397 8 8 chr2 139589580 139589706 -111098148 - MIR SINE MIR -60 148 23 471 202 0 0 chr2 139590180 139590269 -111097585 + L1M3 LINE L1 5377 5465 -715 23 0 0 0 chr2 139590346 139590369 -111097485 + AT_rich Low_complexity Low_complexity 1 23 0 2230 166 25 36 chr2 139590369 139590808 -111097046 - Tigger2a DNA MER2_type 0 434 1 669 261 64 11 chr2 139591066 139591396 -111096458 - L1MC/D LINE L1 -744 5402 5198 2073 117 4 0 chr2 139591843 139592144 -111095710 + AluSx SINE Alu 1 302 0 197 0 71 0 chr2 139592147 139592175 -111095679 + (CAAAT)n Simple_repeat Simple_repeat 2 31 0 482 302 85 30 chr2 139592224 139592824 -111095030 - L1MC/D LINE L1 -1898 4248 3616 769 278 146 30 chr2 139593051 139593490 -111094364 + L2 LINE L2 1933 2422 -892 674 205 19 32 chr2 139593492 139593640 -111094214 + MLT1E LTR MaLR 440 587 -6 5098 166 90 25 chr2 139593640 139594796 -111093058 + Tigger3b DNA MER2_type 1 1231 0 2270 223 128 17 chr2 139595317 139595976 -111091878 - MER44D DNA MER2_type -1 604 1 22 35 0 0 chr2 139596082 139596111 -111091743 + AT_rich Low_complexity Low_complexity 1 29 0 383 295 198 16 chr2 139597184 139597503 -111090351 + L1ME3A LINE L1 4995 5371 -775 228 277 0 0 chr2 139597503 139597550 -111090304 + polypurine Low_complexity Low_complexity 2 48 0 1576 259 119 41 chr2 139597563 139598277 -111089577 + L1ME3A LINE L1 5401 6170 0 313 278 7 42 chr2 139598280 139598424 -111089430 + L1MC5 LINE L1 7774 7912 -49 311 247 13 13 chr2 139598558 139598635 -111089219 + L2 LINE L2 3232 3308 -5 1769 211 68 30 chr2 139598662 139599136 -111088718 - LTR48B LTR ERV1 -2 642 151 336 306 19 0 chr2 139599128 139599236 -111088618 - MER34 LTR ERV1 -432 110 1 * 922 46 0 0 chr2 139599569 139599678 -111088176 + L1PA7 LINE L1 6040 6148 -6 363 78 0 0 chr2 139599960 139600011 -111087843 + (CA)n Simple_repeat Simple_repeat 2 52 0 1364 159 31 27 chr2 139600066 139600323 -111087531 - Tigger2 DNA MER2_type -10 2708 2451 2258 166 3 11 chr2 139600379 139600759 -111087095 - Tigger2 DNA MER2_type -1973 745 369 296 345 55 64 chr2 139601209 139601444 -111086410 + L2 LINE L2 2647 2879 -435 225 392 40 34 chr2 139601655 139601803 -111086051 + L2 LINE L2 3115 3263 -9 498 183 16 8 chr2 139602789 139602915 -111084939 + GA-rich Low_complexity Low_complexity 3 129 0 1672 197 21 18 chr2 139603062 139603442 -111084412 + LTR52 LTR ERVL 1 381 -40 2233 104 3 3 chr2 139603941 139604250 -111083604 + AluSp SINE Alu 1 309 -4 378 61 0 0 chr2 139604278 139604327 -111083527 + (TCCTG)n Simple_repeat Simple_repeat 2 50 0 1909 152 7 0 chr2 139604327 139604617 -111083237 - AluSx SINE Alu -20 292 1 1299 213 72 41 chr2 139604730 139605191 -111082663 - L1ME2 LINE L1 -11 6222 5748 * 1682 250 47 23 chr2 139605190 139606387 -111081467 - L1ME2 LINE L1 -1067 5148 3830 396 0 0 0 chr2 139606387 139606431 -111081423 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1682 250 47 23 chr2 139606431 139606466 -111081388 - L1ME2 LINE L1 -2385 3830 3797 301 246 45 9 chr2 139606466 139606576 -111081278 - L1ME2 LINE L1 -2902 3313 3200 584 248 44 10 chr2 139606610 139606816 -111081038 - L1ME2 LINE L1 -3143 3072 2860 28 29 0 0 chr2 139606836 139606871 -111080983 + AT_rich Low_complexity Low_complexity 1 35 0 341 352 34 53 chr2 139607274 139607629 -111080225 - L1ME2 LINE L1 -6014 382 35 459 254 25 8 chr2 139608444 139608562 -111079292 + L3b LINE CR1 1244 1363 -220 21 36 0 0 chr2 139608771 139608799 -111079055 + AT_rich Low_complexity Low_complexity 1 28 0 204 245 139 11 chr2 139608983 139609070 -111078784 - MIR SINE MIR -63 145 53 23 33 0 0 chr2 139609866 139609896 -111077958 + AT_rich Low_complexity Low_complexity 1 30 0 252 308 83 60 chr2 139610212 139610413 -111077441 - MIR SINE MIR -14 248 38 273 229 51 85 chr2 139610465 139610583 -111077271 - L2 LINE L2 0 3272 3159 1923 171 28 71 chr2 139610858 139611320 -111076534 + MLT1C LTR MaLR 3 444 -23 326 247 21 10 chr2 139611350 139611447 -111076407 + CT-rich Low_complexity Low_complexity 3 100 0 508 325 70 12 chr2 139612457 139612700 -111075154 + MIR SINE MIR 6 262 0 4353 214 59 22 chr2 139613383 139614454 -111073400 - L1MC3 LINE L1 0 7785 6676 310 280 159 0 chr2 139615415 139615522 -111072332 + MIR SINE MIR 57 180 -82 186 118 0 0 chr2 139615768 139615802 -111072052 + (TG)n Simple_repeat Simple_repeat 1 34 0 2026 92 16 3 chr2 139665845 139666150 -111021704 + pTR5 LTR ERV1 60 368 -2070 3345 220 46 19 chr2 139666150 139667125 -111020729 + L1PA12 LINE L1 2152 3154 -4430 1005 186 45 20 chr2 139667129 139667328 -111020526 + AluJo SINE Alu 1 204 -108 673 164 14 7 chr2 139667713 139667853 -111020001 + GA-rich Low_complexity Low_complexity 2 142 0 1967 112 3 23 chr2 139668215 139668518 -111019336 + AluSx SINE Alu 1 297 -15 930 210 36 131 chr2 139669254 139669644 -111018210 + MLT1A1 LTR MaLR 1 353 -12 7026 233 15 23 chr2 139669845 139670923 -111016931 + L1PA12 LINE L1 3224 4276 -3308 6772 25 2 4 chr2 139670923 139671722 -111016132 + L1PA3 LINE L1 5355 6152 -3 7026 233 15 23 chr2 139671722 139672754 -111015100 + L1PA12 LINE L1 4276 5315 -2269 1126 197 0 25 chr2 139672769 139673008 -111014846 + L1 LINE L1 5802 6034 -1550 2212 204 23 47 chr2 139673012 139673396 -111014458 + L1P LINE L1 6261 6628 -956 1898 186 51 14 chr2 139673396 139673809 -111014045 + MSTA LTR MaLR 1 428 0 2212 204 23 47 chr2 139673809 139673994 -111013860 + L1P LINE L1 6628 6816 -768 1804 156 6 16 chr2 139674188 139674503 -111013351 - AluSx SINE Alu 0 312 1 502 321 77 39 chr2 139675478 139675907 -111011947 + MLT1J2 LTR MaLR 5 450 0 23 0 0 0 chr2 139676508 139676531 -111011323 + AT_rich Low_complexity Low_complexity 1 23 0 581 297 48 36 chr2 139678317 139678654 -111009200 + L1MC3 LINE L1 5644 5984 -1801 * 2819 193 21 46 chr2 139678366 139679018 -111008836 + L1MA10 LINE L1 5699 6334 0 219 146 0 0 chr2 139679123 139679164 -111008690 + (T)n Simple_repeat Simple_repeat 1 41 0 267 322 76 0 chr2 139679397 139679515 -111008339 - MIR SINE MIR -13 249 123 2215 107 0 16 chr2 139680098 139680416 -111007438 - AluSq SINE Alu 0 313 1 264 337 32 0 chr2 139680622 139680717 -111007137 - MIR SINE MIR -95 113 16 258 331 103 7 chr2 139681383 139681528 -111006326 - MIR3 SINE MIR -45 163 5 276 250 32 101 chr2 139681900 139682088 -111005766 - MER104 DNA Tc2 -4 176 2 376 314 39 7 chr2 139682127 139682280 -111005574 - MIR SINE MIR -20 242 85 10769 106 17 3 chr2 139683235 139684793 -111003061 + THE1A-int LTR MaLR 2 1580 0 2730 70 6 6 chr2 139684793 139685148 -111002706 + THE1A LTR MaLR 1 355 0 217 238 0 0 chr2 139685479 139685521 -111002333 - MER5B DNA MER1_type -136 42 1 2486 296 89 14 chr2 139686421 139687518 -111000336 - MER69B DNA AcHobo -39 1187 8 2050 126 0 3 chr2 139687648 139687949 -110999905 + AluSc SINE Alu 3 302 -7 990 85 8 0 chr2 139688402 139688531 -110999323 + AluSc SINE Alu 1 130 -179 21 0 0 0 chr2 139689791 139689812 -110998042 + AT_rich Low_complexity Low_complexity 1 21 0 2212 89 0 7 chr2 139689814 139690105 -110997749 + AluSx SINE Alu 1 289 -23 759 10 30 0 chr2 139690105 139690205 -110997649 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 487 322 29 0 chr2 139691313 139691518 -110996336 + L1MCc LINE L1 921 1131 -5292 286 148 37 99 chr2 139691521 139691602 -110996252 + L1MCc LINE L1 24 99 -6324 26 30 0 0 chr2 139691733 139691766 -110996088 + AT_rich Low_complexity Low_complexity 1 33 0 16256 179 33 13 chr2 139694407 139698729 -110989125 + L1MA4A LINE L1 705 5132 -2433 907 97 14 7 chr2 139698729 139698874 -110988980 + (GAAA)n Simple_repeat Simple_repeat 4 149 0 16256 179 33 13 chr2 139698874 139699233 -110988621 + L1MA4A LINE L1 5132 5482 -2083 2645 180 30 15 chr2 139699226 139699753 -110988101 + L1MA4A LINE L1 7166 7700 -22 * 31 44 0 0 chr2 139699753 139699798 -110988056 + AT_rich Low_complexity Low_complexity 1 45 0 320 233 93 6 chr2 139699803 139699975 -110987879 + L1MB7 LINE L1 5728 5914 -1651 * 560 204 91 0 chr2 139699973 139700035 -110987819 - L1 LINE L1 -775 5371 5316 180 0 0 0 chr2 139700035 139700055 -110987799 + (TTA)n Simple_repeat Simple_repeat 2 21 0 560 204 91 0 chr2 139700055 139700124 -110987730 - L1 LINE L1 -830 5316 5228 * 1671 241 40 2 chr2 139700122 139700578 -110987276 + L1MB7 LINE L1 6786 7258 -345 341 258 101 62 chr2 139700588 139700757 -110987097 + L1M1 LINE L1 6427 6588 -977 1875 133 194 6 chr2 139700757 139701117 -110986737 - MSTA LTR MaLR 0 428 1 341 258 101 62 chr2 139701117 139701304 -110986550 + L1M1 LINE L1 6588 6797 -768 1724 171 10 7 chr2 139701571 139701881 -110985973 - AluJo SINE Alu -1 311 1 227 284 56 116 chr2 139702093 139702396 -110985458 + HAL1 LINE L1 409 693 -1814 208 215 76 51 chr2 139702547 139702626 -110985228 + L2 LINE L2 3233 3313 0 336 238 25 0 chr2 139703371 139703451 -110984403 + MIR SINE MIR 159 240 -22 216 250 21 0 chr2 139703418 139703466 -110984388 + L2 LINE L2 3211 3259 -13 * 510 222 0 0 chr2 139703723 139703840 -110984014 - L1MA9 LINE L1 -30 6282 6166 303 49 0 0 chr2 139703840 139703881 -110983973 + (TG)n Simple_repeat Simple_repeat 2 42 0 3239 173 5 11 chr2 139703881 139704442 -110983412 - Tigger1 DNA MER2_type -1858 560 3 2571 186 27 59 chr2 139704444 139705067 -110982787 - L1MA9 LINE L1 -201 6111 5509 218 193 18 0 chr2 139705629 139705686 -110982168 + (TA)n Simple_repeat Simple_repeat 2 59 0 313 322 0 0 chr2 139705688 139705778 -110982076 - L1MC4 LINE L1 -1339 6703 6614 204 40 0 0 chr2 139705791 139705816 -110982038 + (CATATA)n Simple_repeat Simple_repeat 3 27 0 277 233 47 0 chr2 139705820 139705906 -110981948 - L1MC4 LINE L1 -1339 6703 6614 204 40 0 0 chr2 139705925 139705950 -110981904 + (TA)n Simple_repeat Simple_repeat 2 26 0 1435 186 9 0 chr2 139706373 139706604 -110981250 + 7SLRNA srpRNA srpRNA 1 233 -87 1347 188 65 43 chr2 139706697 139707022 -110980832 - MER44D DNA MER2_type -7 602 1 4527 156 9 4 chr2 139707224 139707994 -110979860 - L1PA15 LINE L1 0 6165 5392 743 155 0 7 chr2 139708108 139708250 -110979604 + CT-rich Low_complexity Low_complexity 2 142 0 983 188 28 14 chr2 139708251 139708464 -110979390 - AluJo SINE Alu -73 239 24 1151 308 46 8 chr2 139709068 139709441 -110978413 - LTR16A LTR ERVL -46 404 18 1560 265 125 30 chr2 139709901 139710468 -110977386 + MLT1E2 LTR MaLR 6 626 0 1680 129 76 0 chr2 139710614 139710928 -110976926 + AluSx SINE Alu 1 334 0 65 25 0 0 chr2 139711437 139711516 -110976338 + AT_rich Low_complexity Low_complexity 1 79 0 224 290 71 58 chr2 139712397 139712552 -110975302 - L3 LINE CR1 -243 1334 1178 283 294 96 66 chr2 139712695 139712892 -110974962 - L3 LINE CR1 -490 1087 885 2372 124 19 14 chr2 139713239 139713601 -110974253 - THE1B LTR MaLR 0 364 1 317 289 0 0 chr2 139714371 139714454 -110973400 + MER94 DNA DNA 1 83 -51 237 196 0 0 chr2 139714631 139714682 -110973172 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 709 313 48 22 chr2 139714697 139715055 -110972799 - L1ME4a LINE L1 -272 5849 5483 629 316 107 36 chr2 139715665 139716143 -110971711 - L1MCc LINE L1 -5840 583 72 391 285 30 141 chr2 139716836 139717369 -110970485 - L2 LINE L2 -2 3311 2838 331 261 45 0 chr2 139717384 139717472 -110970382 - MIR SINE MIR -2 260 169 567 375 39 28 chr2 139717475 139718120 -110969734 + L1MEc LINE L1 39 690 -5706 1441 300 60 10 chr2 139718250 139718500 -110969354 + L1MEc LINE L1 109 345 -6051 198 0 0 0 chr2 139718500 139718522 -110969332 + (CA)n Simple_repeat Simple_repeat 1 22 0 1441 300 60 10 chr2 139718522 139718788 -110969066 + L1MEc LINE L1 345 651 -5745 2677 250 104 52 chr2 139718801 139718851 -110969003 + L1MEc LINE L1 856 902 -5494 5961 100 19 7 chr2 139718851 139720342 -110967512 + L1PA8 LINE L1 4658 6172 0 2677 250 104 52 chr2 139720342 139720396 -110967458 + L1MEc LINE L1 902 952 -5444 501 216 38 127 chr2 139720396 139720632 -110967222 - MER20 DNA MER1_type -4 215 1 2677 250 104 52 chr2 139720632 139722099 -110965755 + L1MEc LINE L1 952 2510 -3886 650 247 81 18 chr2 139722072 139722355 -110965499 + L1MEc LINE L1 1627 1927 -4469 * 1851 221 73 33 chr2 139722377 139722592 -110965262 + L1MEc LINE L1 1993 2198 -4017 1987 133 3 3 chr2 139722592 139722886 -110964968 + AluSx SINE Alu 1 294 -18 1851 221 73 33 chr2 139722886 139723183 -110964671 + L1MEc LINE L1 2198 2481 -3734 201 39 0 0 chr2 139723183 139723209 -110964645 + (CA)n Simple_repeat Simple_repeat 1 26 0 1851 221 73 33 chr2 139723209 139723537 -110964317 + L1MEc LINE L1 2481 2825 -3390 265 316 115 7 chr2 139723550 139723689 -110964165 - MIR SINE MIR -92 170 17 426 208 10 0 chr2 139723831 139723927 -110963927 - MER94 DNA DNA -21 113 17 1590 177 3 43 chr2 139724024 139724324 -110963530 + AluJo SINE Alu 1 288 -24 399 145 0 0 chr2 139724324 139724393 -110963461 + (GGGAA)n Simple_repeat Simple_repeat 1 69 0 16826 28 1 0 chr2 139724411 139726448 -110961406 - L1PA3 LINE L1 -2008 4138 2100 10559 33 2 2 chr2 139726448 139728482 -110959372 + L1PA3 LINE L1 4122 6155 0 5085 75 4 3 chr2 139728621 139729311 -110958543 + L1PA3 LINE L1 5465 6155 0 21 0 0 0 chr2 139730192 139730213 -110957641 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr2 139730250 139730280 -110957574 + AT_rich Low_complexity Low_complexity 1 30 0 1004 282 46 40 chr2 139732674 139733164 -110954690 - MLT1E LTR MaLR -9 580 67 220 274 0 0 chr2 139734532 139734583 -110953271 + (ATG)n Simple_repeat Simple_repeat 3 53 0 285 313 28 28 chr2 139734621 139734765 -110953089 - MIR SINE MIR -108 154 11 2345 157 23 28 chr2 139735631 139736059 -110951795 - MSTB LTR MaLR 0 426 1 785 315 132 22 chr2 139736193 139736647 -110951207 - L2 LINE L2 -610 2704 2201 816 143 8 8 chr2 139736722 139736855 -110950999 + FLAM_C SINE Alu 1 133 0 2055 148 3 0 chr2 139738472 139738770 -110949084 - AluSx SINE Alu -11 301 3 2269 74 37 0 chr2 139739629 139739805 -110948049 - AluY SINE Alu -3 308 115 192 40 0 0 chr2 139739805 139739830 -110948024 + (TG)n Simple_repeat Simple_repeat 2 26 0 2269 74 37 0 chr2 139739830 139739950 -110947904 - AluY SINE Alu -196 115 1 1635 271 77 32 chr2 139739989 139740216 -110947638 - L1M4 LINE L1 -1187 4959 4744 1480 207 96 3 chr2 139740216 139740550 -110947304 - MLT1A1 LTR MaLR 0 365 1 1635 271 77 32 chr2 139740550 139741376 -110946478 - L1M4 LINE L1 -1402 4744 3859 1182 214 119 52 chr2 139741403 139741858 -110945996 + MLT1E2 LTR MaLR 54 497 -8 835 281 78 28 chr2 139741864 139742146 -110945708 - L1M4 LINE L1 -2280 3866 3600 2090 143 0 0 chr2 139742146 139742447 -110945407 - AluSx SINE Alu -11 301 1 835 281 78 28 chr2 139742447 139742847 -110945007 - L1M4 LINE L1 -2546 3600 3144 2162 125 0 0 chr2 139742847 139743152 -110944702 - AluSx SINE Alu -7 305 1 835 281 78 28 chr2 139743152 139743182 -110944672 - L1M4 LINE L1 -3002 3144 3117 254 149 0 0 chr2 139743208 139743255 -110944599 - L1PB4 LINE L1 0 6156 6110 1250 37 25 0 chr2 139743284 139743446 -110944408 - L1PA4 LINE L1 -3 6152 5987 2044 31 0 31 chr2 139743447 139743585 -110944269 + L1PA4 LINE L1 5693 5821 -334 7284 37 29 1 chr2 139743585 139744458 -110943396 + MER11D LTR ERVK 1 897 0 2044 31 0 31 chr2 139744458 139744578 -110943276 + L1PA4 LINE L1 5821 5943 -212 42 36 0 0 chr2 139745391 139745447 -110942407 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr2 139748511 139748534 -110939320 + AT_rich Low_complexity Low_complexity 1 23 0 1177 198 0 22 chr2 139749185 139749417 -110938437 + AluJb SINE Alu 82 308 -4 21 0 0 0 chr2 139750141 139750162 -110937692 + AT_rich Low_complexity Low_complexity 1 21 0 14913 141 50 25 chr2 139750438 139753061 -110934793 - Tigger4(Zombi) DNA MER2_type 0 2731 43 573 101 90 0 chr2 139753057 139753146 -110934708 - Tigger4(Zombi) DNA MER2_type -2621 110 14 * 2059 148 7 3 chr2 139753453 139753763 -110934091 - AluSx SINE Alu -1 311 1 275 207 35 168 chr2 139753940 139754172 -110933682 - MER58C DNA MER1_type -4 211 11 916 256 9 0 chr2 139754251 139754470 -110933384 + MER58A DNA MER1_type 1 221 -3 475 287 88 6 chr2 139754520 139754701 -110933153 - L3 LINE CR1 -126 1451 1256 542 274 5 65 chr2 139755012 139755198 -110932656 + MIR SINE MIR 29 203 -59 189 191 0 64 chr2 139755680 139755727 -110932127 - L2 LINE L2 0 3313 3270 231 229 21 0 chr2 139755848 139755896 -110931958 + L2 LINE L2 2994 3042 -271 209 333 81 20 chr2 139756038 139756137 -110931717 - L3 LINE CR1 -192 1385 1281 555 371 43 0 chr2 139756195 139756427 -110931427 + MIR SINE MIR 7 248 -14 538 335 121 35 chr2 139756458 139756768 -110931086 - L3 LINE CR1 -426 1151 869 528 300 74 0 chr2 139756768 139757011 -110930843 + MIR SINE MIR 2 262 0 538 335 121 35 chr2 139757011 139757270 -110930584 - L3 LINE CR1 -708 869 533 21 82 0 0 chr2 139758520 139758569 -110929285 + AT_rich Low_complexity Low_complexity 1 49 0 242 297 0 0 chr2 139760489 139760563 -110927291 + (TA)n Simple_repeat Simple_repeat 1 74 0 519 272 140 74 chr2 139760580 139761094 -110926760 - L1MC/D LINE L1 -307 5814 5284 23 86 0 0 chr2 139761105 139761163 -110926691 + AT_rich Low_complexity Low_complexity 1 58 0 1643 175 11 55 chr2 139761983 139762331 -110925523 + MER2 DNA MER2_type 5 337 -8 28 79 0 0 chr2 139763086 139763149 -110924705 + AT_rich Low_complexity Low_complexity 1 63 0 2284 79 7 20 chr2 139763755 139764060 -110923794 - AluY SINE Alu -10 301 1 864 96 0 22 chr2 139764545 139764708 -110923146 - FLAM_C SINE Alu 0 160 1 1148 241 96 122 chr2 139765159 139766185 -110921669 - MER52A LTR ERV1 -94 1661 663 290 313 113 7 chr2 139766795 139766945 -110920909 + MIR SINE MIR 57 222 -40 204 360 13 13 chr2 139767046 139767121 -110920733 + L2 LINE L2 3197 3271 -1 1413 219 70 64 chr2 139767521 139768019 -110919835 - MLT1D LTR MaLR -4 501 1 369 86 0 0 chr2 139768582 139768640 -110919214 + (T)n Simple_repeat Simple_repeat 1 58 0 359 304 0 0 chr2 139768834 139768926 -110918928 + MER96 DNA MER1_type? 84 175 0 1749 287 72 15 chr2 139770482 139771067 -110916787 - MLT2E LTR ERVL 0 628 11 209 250 83 14 chr2 139771275 139771347 -110916507 + MIR SINE MIR 63 139 -123 2466 173 22 2 chr2 139771443 139771889 -110915965 + MSTB2 LTR MaLR 3 457 0 318 346 95 24 chr2 139771891 139772270 -110915584 - LTR16C LTR ERVL -10 481 76 215 31 31 0 chr2 139772538 139772570 -110915284 + (TTA)n Simple_repeat Simple_repeat 3 35 0 6146 71 4 4 chr2 139772572 139773372 -110914482 - L1PA7 LINE L1 -20 6134 5335 450 0 0 0 chr2 139773424 139773474 -110914380 + (TA)n Simple_repeat Simple_repeat 1 50 0 456 291 82 28 chr2 139773529 139773811 -110914043 + L1ME3A LINE L1 4733 5029 -1117 334 353 84 22 chr2 139774141 139774527 -110913327 + L1ME3A LINE L1 5452 5863 -307 226 267 44 22 chr2 139774916 139775006 -110912848 + MER102b DNA MER1_type 240 331 -10 25 31 0 0 chr2 139775020 139775052 -110912802 + AT_rich Low_complexity Low_complexity 1 32 0 189 219 125 47 chr2 139775210 139775274 -110912580 + L2 LINE L2 3203 3271 -1 8634 30 0 0 chr2 139776607 139777635 -110910219 - L1P LINE L1 -1929 4217 3190 7777 17 2 0 chr2 139777636 139778576 -110909278 + L1HS LINE L1 5214 6155 0 206 32 32 0 chr2 139778576 139778607 -110909247 + (TAAAAA)n Simple_repeat Simple_repeat 5 36 0 1770 141 3 11 chr2 139778904 139779236 -110908618 - AluSx SINE Alu 0 332 3 346 297 27 54 chr2 139779829 139779977 -110907877 + MER5A DNA MER1_type 44 187 -2 770 11 21 0 chr2 139781144 139781238 -110906616 + (TTTC)n Simple_repeat Simple_repeat 1 96 0 629 209 0 50 chr2 139782260 139782399 -110905455 - FLAM_C SINE Alu 0 133 2 265 146 10 83 chr2 139782511 139782607 -110905247 + (TATAA)n Simple_repeat Simple_repeat 1 89 0 1858 124 0 4 chr2 139782685 139782958 -110904896 - AluSg SINE Alu -7 303 32 1333 202 5 11 chr2 139783058 139783417 -110904437 - L1MB8 LINE L1 -170 6008 5560 27 92 0 0 chr2 139783799 139783875 -110903979 + AT_rich Low_complexity Low_complexity 1 76 0 24 32 0 0 chr2 139784055 139784086 -110903768 + AT_rich Low_complexity Low_complexity 1 31 0 2514 71 0 0 chr2 139784545 139784856 -110902998 + AluY SINE Alu 1 311 0 549 281 84 15 chr2 139784932 139785135 -110902719 + MIR SINE MIR 1 217 -45 * 802 230 7 0 chr2 139785129 139785277 -110902577 + MER5B DNA MER1_type 28 176 -2 631 149 7 26 chr2 139785540 139785694 -110902160 + GA-rich Low_complexity Low_complexity 2 152 0 2703 160 7 113 chr2 139785925 139786048 -110901806 - MER41C LTR ERV1 0 554 419 2181 116 0 6 chr2 139786048 139786359 -110901495 + AluSc SINE Alu 1 309 0 2703 160 7 113 chr2 139786359 139786627 -110901227 - MER41C LTR ERV1 -135 419 250 1478 143 0 0 chr2 139786627 139786851 -110901003 - AluSg/x SINE Alu -5 305 82 2703 160 7 113 chr2 139786851 139787077 -110900777 - MER41C LTR ERV1 -304 250 2 220 162 0 0 chr2 139787164 139787201 -110900653 - MIR SINE MIR -161 101 65 470 335 89 63 chr2 139787226 139787778 -110900076 + L2 LINE L2 1819 2384 -930 357 357 42 12 chr2 139787786 139787954 -110899900 + L2 LINE L2 2583 2755 -559 196 293 333 0 chr2 139788016 139788115 -110899739 - L2 LINE L2 0 3313 3182 393 329 37 81 chr2 139788323 139788733 -110899121 + L2 LINE L2 2884 3275 -38 2105 121 0 0 chr2 139789120 139789409 -110898445 + AluSx SINE Alu 7 295 -17 2206 73 7 3 chr2 139789411 139789713 -110898141 + AluY SINE Alu 1 303 -8 532 236 0 106 chr2 139789889 139790088 -110897766 - MER5B DNA MER1_type 0 178 1 421 346 37 0 chr2 139790642 139790804 -110897050 - MIR SINE MIR -49 213 46 198 91 0 0 chr2 139792156 139792189 -110895665 + (A)n Simple_repeat Simple_repeat 1 33 0 227 321 30 22 chr2 139793038 139793172 -110894682 + L2 LINE L2 2353 2487 -827 205 359 22 11 chr2 139793332 139793424 -110894430 + MIR SINE MIR 56 148 -114 22 35 0 0 chr2 139793428 139793457 -110894397 + AT_rich Low_complexity Low_complexity 1 29 0 2204 181 68 15 chr2 139793468 139793926 -110893928 + MER31A LTR ERV1 1 482 -3 3075 110 22 4 chr2 139793956 139794411 -110893443 + MER4C LTR ERV1 3 465 0 1214 135 61 38 chr2 139794423 139794829 -110893025 + MER4C-int LTR ERV1 9 563 -6035 186 103 0 0 chr2 139794833 139794862 -110892992 + (TTG)n Simple_repeat Simple_repeat 1 29 0 364 176 0 6 chr2 139794863 139794972 -110892882 + MER4C-int LTR ERV1 639 812 -5786 261 0 0 0 chr2 139794987 139795016 -110892838 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1702 216 48 51 chr2 139795042 139795477 -110892377 + MER4C-int LTR ERV1 1838 2271 -4060 407 169 17 21 chr2 139795481 139795577 -110892277 + MER4C-int LTR ERV1 845 2732 -3214 319 130 0 19 chr2 139795591 139795644 -110892210 + MER34C LTR ERV1 160 211 -374 2256 127 38 3 chr2 139795644 139795990 -110891864 - THE1B LTR MaLR 0 364 7 1963 156 79 51 chr2 139796110 139796667 -110891187 + MER4C-int LTR ERV1 1840 3024 -3734 5861 160 46 49 chr2 139796668 139799064 -110888790 + MER4C-int LTR ERV1 786 4625 -1973 2065 167 3 3 chr2 139799064 139799400 -110888454 + MER1B DNA MER1_type 2 337 0 5861 160 46 49 chr2 139799400 139799640 -110888214 + MER4C-int LTR ERV1 4625 4864 -1734 2318 85 7 7 chr2 139799698 139800004 -110887850 + AluSq SINE Alu 2 307 -6 5393 169 40 52 chr2 139800008 139801275 -110886579 + MER4C-int LTR ERV1 5347 6597 -1 2847 111 38 7 chr2 139801279 139801730 -110886124 + MER4C LTR ERV1 1 465 0 627 270 59 20 chr2 139801844 139802048 -110885806 - MIR SINE MIR -2 260 49 216 222 28 28 chr2 139802364 139802472 -110885382 + (TA)n Simple_repeat Simple_repeat 2 109 0 366 274 61 20 chr2 139802480 139802501 -110885353 - L1ME1 LINE L1 -234 5932 5912 1245 283 67 17 chr2 139802501 139803246 -110884608 - L1MA6 LINE L1 -387 5913 5112 1298 142 24 0 chr2 139803335 139803547 -110884307 - L1PA16 LINE L1 -9 6157 5941 295 167 0 0 chr2 139803621 139803663 -110884191 - 5S rRNA rRNA -79 42 1 24 0 0 0 chr2 139804086 139804110 -110883744 + AT_rich Low_complexity Low_complexity 1 24 0 2468 136 31 9 chr2 139804414 139804833 -110883021 - MSTA LTR MaLR 0 428 1 600 238 0 8 chr2 139804870 139804992 -110882862 - FLAM_A SINE Alu -12 121 1 1963 248 74 44 chr2 139805022 139806530 -110881324 - L1ME2 LINE L1 -208 5939 4389 333 279 91 5 chr2 139806544 139806741 -110881113 - L1ME2 LINE L1 -4923 1387 1174 * 461 254 52 52 chr2 139806736 139807067 -110880787 - L1ME2 LINE L1 -4905 1214 977 1370 188 21 3 chr2 139807314 139807402 -110880452 - L1MC2 LINE L1 -11 6333 6248 330 67 0 0 chr2 139807402 139807447 -110880407 + (CA)n Simple_repeat Simple_repeat 1 45 0 1370 188 21 3 chr2 139807447 139807645 -110880209 - L1MC2 LINE L1 -96 6248 6042 223 317 0 0 chr2 139807885 139807945 -110879909 + L2 LINE L2 3204 3263 -9 182 171 24 0 chr2 139807947 139807988 -110879866 + GA-rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr2 139808613 139808633 -110879221 + (TA)n Simple_repeat Simple_repeat 2 21 0 1139 201 25 104 chr2 139810774 139810950 -110876904 + MLT1A2 LTR MaLR 3 131 -243 1535 151 6 82 chr2 139810950 139811269 -110876585 + AluJo SINE Alu 3 297 -15 1139 201 25 104 chr2 139811269 139811496 -110876358 + MLT1A2 LTR MaLR 131 374 0 710 262 50 31 chr2 139811521 139811959 -110875895 - MLT1H1 LTR MaLR -24 531 6 207 368 0 0 chr2 139812106 139812163 -110875691 + L2 LINE L2 3210 3266 -6 25 75 0 0 chr2 139812163 139812216 -110875638 + AT_rich Low_complexity Low_complexity 1 53 0 419 268 18 121 chr2 139812277 139812501 -110875353 - MER63A DNA MER1_type -1 209 9 2156 122 0 0 chr2 139812675 139812979 -110874875 + AluSx SINE Alu 1 304 -8 23 33 0 0 chr2 139814636 139814666 -110873188 + AT_rich Low_complexity Low_complexity 1 30 0 296 247 0 0 chr2 139815808 139815881 -110871973 + L1MC5 LINE L1 7833 7905 -56 762 256 45 56 chr2 139816285 139816660 -110871194 + L1MC4 LINE L1 7507 7877 -165 324 326 33 0 chr2 139818150 139818242 -110869612 + MER91A DNA MER1_type 102 196 0 1861 221 44 3 chr2 139818352 139818737 -110869117 + MER45B DNA AcHobo 1 401 -639 2378 131 3 0 chr2 139819699 139820066 -110867788 - L1PA13 LINE L1 -1 6162 5795 445 359 45 0 chr2 139820078 139820276 -110867578 + MIR SINE MIR 53 259 -3 282 29 0 0 chr2 139820647 139820682 -110867172 + (GA)n Simple_repeat Simple_repeat 2 36 0 231 88 0 0 chr2 139820987 139821021 -110866833 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 210 357 78 75 chr2 139821032 139821326 -110866528 - L2 LINE L2 -43 3229 2935 21 0 0 0 chr2 139821913 139821934 -110865920 + AT_rich Low_complexity Low_complexity 1 21 0 510 283 57 30 chr2 139822072 139822302 -110865552 + LTR52 LTR ERVL 1 236 -185 505 198 137 39 chr2 139822899 139823081 -110864773 - L1MB7 LINE L1 -3 6181 5982 1460 162 19 8 chr2 139823115 139823381 -110864473 - L1MB7 LINE L1 -281 5897 5629 515 210 8 25 chr2 139823370 139823489 -110864365 + L1MB7 LINE L1 5505 5621 -563 * 21 57 0 0 chr2 139823511 139823546 -110864308 + AT_rich Low_complexity Low_complexity 1 35 0 260 255 0 0 chr2 139823585 139823636 -110864218 + (TCCA)n Simple_repeat Simple_repeat 1 51 0 1801 189 127 0 chr2 139823728 139824099 -110863755 - MSTB LTR MaLR -8 418 1 1406 213 41 44 chr2 139824280 139824669 -110863185 - MLT1B LTR MaLR -2 388 1 1023 202 59 0 chr2 139826848 139827051 -110860803 + MER58A DNA MER1_type 7 221 -3 701 145 130 0 chr2 139828513 139828651 -110859203 - MER96B DNA MER1_type? -242 175 20 1973 65 80 7 chr2 139829194 139829469 -110858385 - AluY SINE Alu -16 295 1 1256 244 70 48 chr2 139831954 139832486 -110855368 - MER39 LTR ERV1 -1 706 1 1112 253 64 50 chr2 139832620 139833058 -110854796 + MLT1G LTR MaLR 1 444 -146 293 197 45 0 chr2 139834926 139834992 -110852862 - MER92C LTR ERV1 -2 552 484 191 346 103 0 chr2 139836319 139836397 -110851457 - MIR SINE MIR -74 134 49 23 68 0 0 chr2 139836609 139836653 -110851201 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr2 139836876 139836904 -110850950 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr2 139837183 139837219 -110850635 + AT_rich Low_complexity Low_complexity 1 36 0 294 392 31 12 chr2 139837447 139837702 -110850152 - L2 LINE L2 -492 2822 2563 207 69 0 0 chr2 139838605 139838634 -110849220 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 27 0 0 0 chr2 139839232 139839259 -110848595 + AT_rich Low_complexity Low_complexity 1 27 0 585 266 133 26 chr2 139839362 139839588 -110848266 + MIR SINE MIR 13 262 0 362 314 8 16 chr2 139839707 139839828 -110848026 + L2 LINE L2 3190 3309 -4 2390 93 7 0 chr2 139841115 139841425 -110846429 - AluSx SINE Alu 0 312 1 498 364 17 6 chr2 139841822 139841998 -110845856 - MER5B DNA MER1_type 0 178 1 1256 214 91 9 chr2 139842102 139842420 -110845434 - MER2 DNA MER2_type 0 344 1 316 252 61 27 chr2 139842928 139843075 -110844779 - MER103 DNA DNA -6 160 9 799 249 88 88 chr2 139843305 139843838 -110844016 - MER34 LTR ERV1 0 542 10 213 138 35 17 chr2 139843857 139843915 -110843939 + (TA)n Simple_repeat Simple_repeat 1 59 0 203 390 93 6 chr2 139843963 139844145 -110843709 - MIR SINE MIR -56 206 9 23 33 0 0 chr2 139844273 139844303 -110843551 + AT_rich Low_complexity Low_complexity 1 30 0 31 0 0 0 chr2 139845045 139845076 -110842778 + AT_rich Low_complexity Low_complexity 1 31 0 588 29 0 0 chr2 139845770 139845840 -110842014 + (TG)n Simple_repeat Simple_repeat 2 71 0 623 340 148 26 chr2 139846174 139846434 -110841420 - L2 LINE L2 -2400 914 687 1831 175 35 55 chr2 139846434 139846835 -110841019 + MSTD LTR MaLR 1 393 -3 2105 139 55 0 chr2 139846835 139847180 -110840674 - THE1B LTR MaLR 0 364 1 623 340 148 26 chr2 139847180 139847613 -110840241 - L2 LINE L2 -2626 688 135 23 68 0 0 chr2 139847921 139847965 -110839889 + AT_rich Low_complexity Low_complexity 1 44 0 563 328 39 0 chr2 139848190 139848370 -110839484 + MER5A DNA MER1_type 3 189 0 23 68 0 0 chr2 139849202 139849246 -110838608 + AT_rich Low_complexity Low_complexity 1 44 0 222 245 20 0 chr2 139849806 139849855 -110837999 + MIR SINE MIR 105 154 -108 377 353 54 18 chr2 139850632 139850856 -110836998 - MIR SINE MIR -11 251 20 379 373 19 0 chr2 139853335 139853493 -110834361 - L3b LINE CR1 -119 1464 1304 2428 182 20 28 chr2 139854415 139855014 -110832840 - pTR5 LTR ERV1 -1102 1336 743 1832 291 44 47 chr2 139855015 139856037 -110831817 - L1PA12 LINE L1 -5398 2183 1271 609 317 98 0 chr2 139856878 139857102 -110830752 + MIR SINE MIR 17 262 0 22 94 0 0 chr2 139857123 139857187 -110830667 + AT_rich Low_complexity Low_complexity 1 64 0 1456 172 15 34 chr2 139859392 139859584 -110828270 + MER33 DNA MER1_type 1 186 -2399 2193 123 3 0 chr2 139859584 139859886 -110827968 + AluSx SINE Alu 1 303 -9 1456 172 15 34 chr2 139859886 139860019 -110827835 + MER33 DNA MER1_type 186 320 -4 213 182 0 0 chr2 139860500 139860533 -110827321 + polypurine Low_complexity Low_complexity 2 34 0 1876 168 0 3 chr2 139860863 139861160 -110826694 - AluJo SINE Alu -16 296 1 3882 186 19 22 chr2 139861163 139861944 -110825910 - L1MB5 LINE L1 -36 6138 5360 207 87 0 65 chr2 139862419 139862465 -110825389 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 544 195 6 29 chr2 139862886 139863060 -110824794 + CT-rich Low_complexity Low_complexity 3 172 0 2024 147 3 0 chr2 139864439 139864732 -110823122 - AluSx SINE Alu -18 294 1 382 228 0 11 chr2 139864925 139865017 -110822837 - L1MB5 LINE L1 -808 5366 5276 190 339 52 26 chr2 139865061 139865176 -110822678 - MIR SINE MIR -122 140 23 24 0 0 0 chr2 139865443 139865467 -110822387 + AT_rich Low_complexity Low_complexity 1 24 0 2239 62 22 4 chr2 139865499 139865810 -110822044 - AluY SINE Alu 0 317 2 26 0 0 0 chr2 139865867 139865893 -110821961 + AT_rich Low_complexity Low_complexity 1 26 0 943 213 0 29 chr2 139867417 139867624 -110820230 + MER3 DNA MER1_type 9 209 0 331 320 153 38 chr2 139868255 139868602 -110819252 + L1ME LINE L1 5336 5722 -2086 303 231 0 0 chr2 139868626 139868691 -110819163 + L1ME LINE L1 5657 5721 -400 395 298 56 39 chr2 139869706 139869884 -110817970 + L2 LINE L2 3133 3313 0 2139 82 41 27 chr2 139870089 139870381 -110817473 - AluY SINE Alu -15 296 1 754 210 180 98 chr2 139870507 139870997 -110816857 - MER34 LTR ERV1 -2 540 11 22 0 0 0 chr2 139871941 139871963 -110815891 + AT_rich Low_complexity Low_complexity 1 22 0 1135 214 71 6 chr2 139872380 139872716 -110815138 - LTR37A LTR ERV1 0 426 69 2641 10 0 0 chr2 139872929 139873292 -110814562 - AluYb8 SINE Alu 0 363 1 25 75 0 0 chr2 139873467 139873520 -110814334 + AT_rich Low_complexity Low_complexity 1 53 0 211 254 55 0 chr2 139873602 139873657 -110814197 + MER91C DNA MER1_type 51 108 -32 701 285 128 39 chr2 139875383 139875765 -110812089 + L2 LINE L2 2897 3312 -1 361 0 0 0 chr2 139876380 139876420 -110811434 + (TTTA)n Simple_repeat Simple_repeat 1 60 0 1939 136 0 0 chr2 139876420 139876700 -110811154 - AluSg SINE Alu -30 280 1 1659 199 31 17 chr2 139877170 139877526 -110810328 - MLT1A1 LTR MaLR -2 363 3 207 0 0 0 chr2 139877636 139877659 -110810195 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 315 0 0 0 chr2 139878179 139878214 -110809640 + (TG)n Simple_repeat Simple_repeat 2 36 0 250 246 33 0 chr2 139879020 139879081 -110808773 - MIR SINE MIR -87 175 113 21 36 0 0 chr2 139879262 139879290 -110808564 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 139879689 139879718 -110808136 + AT_rich Low_complexity Low_complexity 1 29 0 378 108 0 0 chr2 139880124 139880189 -110807665 + (TG)n Simple_repeat Simple_repeat 2 66 0 1637 130 116 29 chr2 139881731 139882076 -110805778 - THE1C LTR MaLR 0 375 1 335 140 18 0 chr2 139882378 139882435 -110805419 + MLT2F LTR ERVL 6 63 -600 932 266 74 35 chr2 139882513 139882825 -110805029 + MLT2F LTR ERVL 238 561 -102 270 330 0 60 chr2 139883718 139883818 -110804036 + L2 LINE L2 3164 3257 -15 304 346 58 19 chr2 139884082 139884287 -110803567 - LTR33 LTR ERVL 0 521 309 24 67 0 0 chr2 139884655 139884700 -110803154 + AT_rich Low_complexity Low_complexity 1 45 0 960 184 50 0 chr2 139885089 139885268 -110802586 - MER5A DNA MER1_type -1 188 1 37 23 0 0 chr2 139885333 139885377 -110802477 + AT_rich Low_complexity Low_complexity 1 44 0 1519 203 77 21 chr2 139885465 139885840 -110802014 - MSTD LTR MaLR 0 396 1 214 191 0 0 chr2 139886492 139886534 -110801320 + A-rich Low_complexity Low_complexity 1 42 0 914 183 0 70 chr2 139886553 139886766 -110801088 + MER3 DNA MER1_type 1 198 -11 470 291 74 11 chr2 139887575 139887764 -110800090 - MIR SINE MIR -6 256 56 210 280 3 95 chr2 139888198 139888275 -110799579 + MIR SINE MIR 47 119 -89 689 216 6 0 chr2 139888395 139888566 -110799288 - L1MB7 LINE L1 -11 6173 6002 638 194 163 0 chr2 139890242 139890402 -110797452 - MER5A DNA MER1_type 0 189 4 237 362 93 16 chr2 139892336 139892593 -110795261 - L2 LINE L2 -995 2319 2043 1975 233 39 22 chr2 139892663 139893127 -110794727 + MER70B LTR ERVL 5 476 -102 227 125 0 0 chr2 139893125 139893157 -110794697 + MER70A LTR ERVL 441 472 0 * 331 347 114 75 chr2 139893181 139893193 -110794661 - L2 LINE L2 -10 3262 3252 2564 55 0 0 chr2 139893193 139893501 -110794353 + AluY SINE Alu 1 308 -3 331 347 114 75 chr2 139893501 139893874 -110793980 - L2 LINE L2 -20 3252 2862 699 312 121 23 chr2 139893892 139894322 -110793532 + L2 LINE L2 1937 2408 -906 21 57 0 0 chr2 139895484 139895519 -110792335 + AT_rich Low_complexity Low_complexity 1 35 0 180 327 106 39 chr2 139895520 139895624 -110792230 + MIR SINE MIR 33 143 -119 214 154 51 0 chr2 139895669 139895708 -110792146 + (CATATA)n Simple_repeat Simple_repeat 5 45 0 324 244 104 74 chr2 139895897 139895926 -110791928 - MLT1G1 LTR MaLR -9 586 559 2003 101 10 34 chr2 139895926 139896223 -110791631 + AluSc SINE Alu 1 290 -19 324 244 104 74 chr2 139896223 139896328 -110791526 - MLT1G1 LTR MaLR -36 559 448 1883 121 31 64 chr2 139896383 139896771 -110791083 + THE1C LTR MaLR 1 375 0 1684 125 3 1 chr2 139896771 139897124 -110790730 + THE1C-int LTR MaLR 1 375 0 709 264 25 93 chr2 139897131 139897482 -110790372 - MLT1G1 LTR MaLR -224 371 1 23 33 0 0 chr2 139898318 139898348 -110789506 + AT_rich Low_complexity Low_complexity 1 30 0 805 264 29 5 chr2 139899310 139899518 -110788336 + MER58A DNA MER1_type 4 216 -8 2091 118 10 0 chr2 139899677 139899983 -110787871 - AluSc SINE Alu 0 309 1 23 0 0 0 chr2 139900595 139900618 -110787236 + AT_rich Low_complexity Low_complexity 1 23 0 1360 234 0 32 chr2 139900909 139901217 -110786637 + AluJo SINE Alu 1 298 -14 227 326 83 15 chr2 139901271 139901403 -110786451 + MIR SINE MIR 122 262 0 22 56 0 0 chr2 139901466 139901502 -110786352 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 139901517 139901538 -110786316 + AT_rich Low_complexity Low_complexity 1 21 0 216 284 103 99 chr2 139901703 139901782 -110786072 - MIR SINE MIR 0 262 185 1559 210 0 7 chr2 139901782 139902082 -110785772 - AluJb SINE Alu -12 300 3 216 284 103 99 chr2 139902082 139902245 -110785609 - MIR SINE MIR -77 185 19 296 335 71 18 chr2 139902388 139902558 -110785296 + L1MB4 LINE L1 43 221 -6321 2081 250 74 41 chr2 139902870 139903770 -110784084 + L1MB4 LINE L1 811 1740 -4906 3222 248 56 30 chr2 139903777 139905101 -110782753 + L1MB4 LINE L1 2820 4178 -2466 3151 205 81 44 chr2 139905091 139905639 -110782215 + L1MB4 LINE L1 5003 5529 -1149 * 2793 25 0 0 chr2 139905639 139905957 -110781897 + AluYb8 SINE Alu 1 318 0 3151 205 81 44 chr2 139905957 139907036 -110780818 + L1MB4 LINE L1 5529 6677 -1 3674 91 58 6 chr2 139908486 139909023 -110778831 + MER61E LTR ERV1 1 565 -4 269 346 78 20 chr2 139909156 139909309 -110778545 + L1MC/D LINE L1 5494 5655 -2153 5122 78 3 24 chr2 139909312 139910018 -110777836 - LTR8 LTR ERV1 0 691 1 267 311 0 0 chr2 139910085 139910175 -110777679 + MIR SINE MIR 160 249 -13 26 30 0 0 chr2 139910410 139910443 -110777411 + AT_rich Low_complexity Low_complexity 1 33 0 2398 81 3 3 chr2 139910475 139910782 -110777072 + AluSp SINE Alu 2 308 -5 2084 178 34 29 chr2 139911228 139911777 -110776077 + MLT2A2 LTR ERVL 1 554 0 2294 195 100 44 chr2 139913595 139914283 -110773571 + LTR8A LTR ERV1 1 727 0 1428 297 78 15 chr2 139914487 139915473 -110772381 - MER69B DNA AcHobo -87 1139 49 3663 138 47 5 chr2 139915583 139916201 -110771653 + LTR9B LTR ERV1 1 644 0 189 147 0 0 chr2 139916596 139916630 -110771224 + (A)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr2 139917432 139917461 -110770393 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 473 0 18 0 chr2 139917460 139917517 -110770337 + (GA)n Simple_repeat Simple_repeat 2 59 0 26 30 0 0 chr2 139919116 139919149 -110768705 + AT_rich Low_complexity Low_complexity 1 33 0 233 292 33 58 chr2 139919369 139919489 -110768365 - MIR SINE MIR 0 262 146 1744 210 83 2 chr2 139921031 139921427 -110766427 + MSTA LTR MaLR 1 428 0 448 274 51 57 chr2 139922130 139922305 -110765549 - MER21B LTR ERV1 -362 501 328 21 0 0 0 chr2 139922381 139922402 -110765452 + AT_rich Low_complexity Low_complexity 1 21 0 7460 34 0 0 chr2 139922568 139923694 -110764160 - L1PA4 LINE L1 -1 6154 5030 5275 43 0 0 chr2 139923694 139924342 -110763512 + L1P LINE L1 4417 5064 -1082 323 275 144 24 chr2 139925155 139925322 -110762532 + MIR SINE MIR 12 198 -64 30 0 0 44 chr2 139925559 139925585 -110762269 + AT_rich Low_complexity Low_complexity 1 26 -17 1772 163 0 10 chr2 139925585 139925874 -110761980 - AluSx SINE Alu -26 286 1 30 0 0 44 chr2 139925874 139925892 -110761962 + AT_rich Low_complexity Low_complexity 26 43 0 2164 119 0 0 chr2 139926207 139926500 -110761354 - AluSc SINE Alu -16 293 1 23 0 0 0 chr2 139926661 139926684 -110761170 + AT_rich Low_complexity Low_complexity 1 23 0 369 269 0 0 chr2 139928113 139928206 -110759648 + MER5A DNA MER1_type 13 105 -84 519 125 0 0 chr2 139928982 139929062 -110758792 - MADE1 DNA Mariner 0 80 1 2381 211 23 42 chr2 139929963 139929992 -110757862 + MER34B LTR ERV1 7 35 -530 2011 124 0 3 chr2 139929992 139930301 -110757553 - AluSg SINE Alu 0 308 1 2381 211 23 42 chr2 139930301 139930840 -110757014 + MER34B LTR ERV1 35 565 0 314 258 86 60 chr2 139930842 139931075 -110756779 - L1M4 LINE L1 -2789 3357 3119 2760 199 32 21 chr2 139931307 139931934 -110755920 - LTR27 LTR ERV1 0 636 3 32 26 0 0 chr2 139932327 139932366 -110755488 + AT_rich Low_complexity Low_complexity 1 39 0 347 336 0 0 chr2 139933049 139933177 -110754677 - MIR SINE MIR -35 227 100 24 67 0 0 chr2 139934106 139934151 -110753703 + AT_rich Low_complexity Low_complexity 1 45 0 1080 214 15 4 chr2 139934156 139934443 -110753411 + L1MD2 LINE L1 5791 6077 -89 525 254 30 30 chr2 139934485 139934650 -110753204 + L1MD2 LINE L1 6194 6358 -1 1968 130 14 3 chr2 139934654 139934946 -110752908 + AluSx SINE Alu 1 295 -17 681 230 24 6 chr2 139935089 139935254 -110752600 + MIR SINE MIR 71 238 -24 547 331 100 21 chr2 139935321 139935898 -110751956 - L2 LINE L2 -4 3309 2640 1544 215 93 14 chr2 139935907 139936335 -110751519 - MLT1D LTR MaLR -7 498 37 1396 270 139 34 chr2 139936357 139937090 -110750764 - L2 LINE L2 -683 2631 1822 881 123 7 0 chr2 139937234 139937372 -110750482 - L1PA13 LINE L1 -2 6161 6023 2781 233 10 17 chr2 139937372 139938087 -110749767 - L1 LINE L1 -1833 4313 3604 689 287 57 32 chr2 139938087 139938401 -110749453 - LTR52 LTR ERVL -99 322 1 449 284 24 108 chr2 139938402 139938652 -110749202 - L2 LINE L2 -2999 315 87 291 371 74 6 chr2 139938779 139938954 -110748900 - MIR SINE MIR -74 188 2 21 36 0 0 chr2 139939432 139939460 -110748394 + AT_rich Low_complexity Low_complexity 1 28 0 2188 121 0 3 chr2 139939708 139940013 -110747841 + AluSq SINE Alu 1 304 -9 27 0 0 0 chr2 139940445 139940472 -110747382 + AT_rich Low_complexity Low_complexity 1 27 0 1838 181 0 0 chr2 139940480 139940768 -110747086 - AluJb SINE Alu -24 288 1 23 0 0 0 chr2 139941000 139941023 -110746831 + AT_rich Low_complexity Low_complexity 1 23 0 6791 141 14 5 chr2 139941846 139943759 -110744095 - L1MA1 LINE L1 0 6302 4372 803 194 79 0 chr2 139943755 139943920 -110743934 - L1MA1 LINE L1 -2192 3954 3777 * 21 36 0 0 chr2 139944229 139944257 -110743597 + AT_rich Low_complexity Low_complexity 1 28 0 1988 175 23 7 chr2 139944335 139944774 -110743080 - L1MA4 LINE L1 -1380 4766 4321 * 5183 175 25 35 chr2 139944773 139946259 -110741595 + L1MA4 LINE L1 4767 6259 -41 40 87 0 0 chr2 139946297 139946400 -110741454 + AT_rich Low_complexity Low_complexity 1 103 0 645 194 163 0 chr2 139948910 139949070 -110738784 - MER5A DNA MER1_type 0 189 4 230 362 93 16 chr2 139951004 139951261 -110736593 - L2 LINE L2 -995 2319 2043 1988 233 39 22 chr2 139951331 139951795 -110736059 + MER70B LTR ERVL 5 476 -102 228 125 0 0 chr2 139951793 139951825 -110736029 + MER70A LTR ERVL 441 472 0 * 2083 94 10 34 chr2 139951861 139952158 -110735696 + AluSc SINE Alu 1 290 -19 252 246 88 52 chr2 139952158 139952319 -110735535 - MLT1F LTR MaLR -34 561 303 1923 123 28 67 chr2 139952319 139952709 -110735145 + THE1C LTR MaLR 1 375 0 252 246 88 52 chr2 139952709 139952723 -110735131 - MLT1F LTR MaLR -292 303 291 1628 117 3 1 chr2 139952727 139953062 -110734792 + THE1C-int LTR MaLR 19 375 0 715 261 25 93 chr2 139953069 139953420 -110734434 - MLT1G1 LTR MaLR -224 371 1 43555 36 1 20 chr2 139954350 139960201 -110727653 - L1P1 LINE L1 -420 5735 1 22 0 0 0 chr2 139960674 139960696 -110727158 + AT_rich Low_complexity Low_complexity 1 22 0 1985 138 7 3 chr2 139960784 139961089 -110726765 + AluSx SINE Alu 1 306 -6 24 0 0 0 chr2 139961236 139961260 -110726594 + AT_rich Low_complexity Low_complexity 1 24 0 312 266 34 30 chr2 139961334 139961464 -110726390 + MIR SINE MIR 33 160 -65 209 286 0 14 chr2 139961967 139962037 -110725817 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 * 239 324 10 10 chr2 139961994 139962096 -110725758 + (TA)n Simple_repeat Simple_repeat 1 102 0 2205 102 10 16 chr2 139962469 139962782 -110725072 - AluSp SINE Alu -2 311 1 377 223 29 39 chr2 139962933 139963036 -110724818 - LTR67 LTR ERVL -14 543 442 435 75 0 0 chr2 139963461 139963528 -110724326 - Alu SINE Alu 0 311 245 557 285 188 38 chr2 139963863 139964317 -110723537 - L2 LINE L2 0 3313 2790 243 259 0 0 chr2 139964317 139964371 -110723483 - MER5A DNA MER1_type 0 189 136 234 0 0 0 chr2 139964378 139964404 -110723450 + (T)n Simple_repeat Simple_repeat 1 26 0 1733 217 29 22 chr2 139964465 139964880 -110722974 + MER65A LTR ERV1 21 438 -7 8094 201 60 52 chr2 139964880 139967318 -110720536 + MER65A-int LTR ERV1 8 2466 -2405 3913 208 66 10 chr2 139967486 139968663 -110719191 + L1MD1 LINE L1 4978 6220 -22 198 0 0 0 chr2 139970438 139970460 -110717394 + (CA)n Simple_repeat Simple_repeat 2 23 0 929 105 17 22 chr2 139971104 139971285 -110716569 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 557 219 230 11 chr2 139972019 139972206 -110715648 - MIR SINE MIR -16 246 19 21 82 0 0 chr2 139972351 139972400 -110715454 + AT_rich Low_complexity Low_complexity 1 49 0 339 231 13 0 chr2 139972733 139972811 -110715043 + MIR SINE MIR 74 152 -110 2521 42 3 10 chr2 139972821 139973128 -110714726 + AluY SINE Alu 1 305 -6 1605 187 29 0 chr2 139973132 139973405 -110714449 + AluJo SINE Alu 1 281 -31 233 29 29 0 chr2 139973405 139973439 -110714415 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 840 292 21 0 chr2 139973660 139973893 -110713961 + MIR SINE MIR 20 257 -5 228 35 0 0 chr2 139974363 139974392 -110713462 + (CA)n Simple_repeat Simple_repeat 2 30 0 292 350 119 12 chr2 139976562 139976722 -110711132 - MER5B DNA MER1_type -1 177 1 487 314 29 23 chr2 139976915 139977087 -110710767 + MER63A DNA MER1_type 38 210 0 24 0 0 0 chr2 139977423 139977447 -110710407 + AT_rich Low_complexity Low_complexity 1 24 0 2213 108 9 0 chr2 139980469 139980792 -110707062 - L1MA1 LINE L1 -405 5897 5572 1860 137 6 82 chr2 139981454 139981819 -110706035 + MER1B DNA MER1_type 1 337 0 1071 281 103 25 chr2 139982073 139982547 -110705307 - MLT1G1 LTR MaLR 0 595 85 298 283 24 102 chr2 139984058 139984351 -110703503 - LTR67 LTR ERVL -7 550 281 415 183 32 21 chr2 139984426 139984519 -110703335 - MLT1B LTR MaLR 0 390 297 361 288 89 69 chr2 139985358 139985705 -110702149 + L1MC/D LINE L1 2133 2486 -3660 801 101 0 0 chr2 139985715 139985824 -110702030 - AluSg/x SINE Alu -16 294 186 1490 143 0 0 chr2 139985824 139986041 -110701813 - AluSg SINE Alu -93 217 1 369 303 112 57 chr2 139986253 139986376 -110701478 + L1MC/D LINE L1 5343 5458 -2350 2252 70 0 11 chr2 139986376 139986693 -110701161 + AluY SINE Alu 1 314 0 369 303 112 57 chr2 139986693 139986987 -110700867 + L1MC/D LINE L1 5458 5784 -2024 281 353 60 9 chr2 139989174 139989290 -110698564 + L2 LINE L2 3151 3272 0 1979 169 54 5 chr2 139990208 139990580 -110697274 + MLT1B LTR MaLR 1 390 0 13417 209 47 17 chr2 139991078 139996799 -110691055 + L1PB1 LINE L1 1 6103 -764 2212 112 0 0 chr2 139996799 139997103 -110690751 + AluY SINE Alu 1 304 -7 13417 209 47 17 chr2 139997103 139997250 -110690604 + L1PB1 LINE L1 6103 6244 -623 3216 114 18 6 chr2 139997257 139997393 -110690461 + L1PB1 LINE L1 6361 6494 -373 342 0 0 0 chr2 139997393 139997431 -110690423 + (CA)n Simple_repeat Simple_repeat 2 39 0 3216 114 18 6 chr2 139997431 139997792 -110690062 + L1PB1 LINE L1 6494 6864 -3 581 294 18 46 chr2 139997808 139998026 -110689828 + MIR SINE MIR 11 222 -40 297 348 34 11 chr2 139998399 139998488 -110689366 + L2 LINE L2 3147 3237 -35 264 313 50 0 chr2 139999859 139999958 -110687896 + MIR SINE MIR 40 143 -65 31 0 0 0 chr2 140000103 140000134 -110687720 + AT_rich Low_complexity Low_complexity 1 31 0 2132 119 3 0 chr2 140000134 140000420 -110687434 - AluSq SINE Alu -26 287 1 260 297 56 119 chr2 140001639 140001959 -110685895 - L2 LINE L2 -3 3269 2970 21 0 0 0 chr2 140002945 140002966 -110684888 + AT_rich Low_complexity Low_complexity 1 21 0 36 40 0 0 chr2 140003549 140003599 -110684255 + AT_rich Low_complexity Low_complexity 1 50 0 215 61 30 0 chr2 140003888 140003921 -110683933 + (CA)n Simple_repeat Simple_repeat 2 35 0 493 310 59 67 chr2 140004222 140004699 -110683155 - MLT1H LTR MaLR -2 547 75 348 299 70 30 chr2 140004879 140005080 -110682774 + L1ME LINE L1 5609 5817 -304 360 0 0 0 chr2 140007379 140007419 -110680435 + (CA)n Simple_repeat Simple_repeat 2 41 0 259 330 115 22 chr2 140007474 140007656 -110680198 + L2 LINE L2 1710 1908 -1406 2295 80 3 0 chr2 140007657 140007978 -110679876 + AluY SINE Alu 1 322 0 185 333 0 29 chr2 140008565 140008634 -110679220 + L2 LINE L2 3205 3271 -1 301 379 35 0 chr2 140008735 140008851 -110679003 + MIR3 SINE MIR 68 187 -21 666 302 96 46 chr2 140009999 140010476 -110677378 - LTR33 LTR ERVL -2 519 19 273 370 10 35 chr2 140011026 140011226 -110676628 - HERV16 LTR ERVL -3550 1446 1252 1423 312 44 51 chr2 140011377 140012220 -110675634 - HERV16 LTR ERVL -3795 1201 365 434 299 41 30 chr2 140012304 140012501 -110675353 - HERV16 LTR ERVL -4758 238 40 876 279 102 4 chr2 140012514 140012779 -110675075 - LTR16A LTR ERVL -4 446 156 509 376 24 6 chr2 140013600 140013765 -110674089 - MER91A DNA MER1_type -28 168 1 568 330 80 9 chr2 140017635 140017847 -110670007 - MIR SINE MIR -19 243 17 21153 27 6 0 chr2 140018123 140021410 -110666444 + L1PA3 LINE L1 2864 6155 0 246 241 25 13 chr2 140021951 140022030 -110665824 + CT-rich Low_complexity Low_complexity 2 81 0 237 65 0 0 chr2 140022031 140022062 -110665792 + (CA)n Simple_repeat Simple_repeat 2 32 0 257 289 40 0 chr2 140022862 140022938 -110664916 - MIR3 SINE MIR -41 167 89 28 0 0 0 chr2 140024307 140024335 -110663519 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr2 140024686 140024714 -110663140 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2092 132 30 0 chr2 140025667 140025970 -110661884 + AluSx SINE Alu 1 312 0 1391 205 14 40 chr2 140026029 140026326 -110661528 + AluJo SINE Alu 1 289 -23 23 68 0 0 chr2 140027500 140027544 -110660310 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 140030727 140030749 -110657105 + AT_rich Low_complexity Low_complexity 1 22 0 199 284 30 30 chr2 140030755 140030822 -110657032 - MIR3 SINE MIR -15 193 127 2166 102 0 13 chr2 140030874 140031189 -110656665 - AluSp SINE Alu -2 311 1 48 60 0 0 chr2 140031338 140031421 -110656433 + AT_rich Low_complexity Low_complexity 1 83 0 228 200 86 14 chr2 140031610 140031680 -110656174 - MLT1H LTR MaLR -31 564 490 185 222 16 0 chr2 140032372 140032435 -110655419 + (CAA)n Simple_repeat Simple_repeat 1 64 0 1239 231 67 14 chr2 140035674 140036020 -110651834 + MLT1A1 LTR MaLR 2 365 0 24 32 0 0 chr2 140036182 140036213 -110651641 + AT_rich Low_complexity Low_complexity 1 31 0 2008 98 0 8 chr2 140037477 140037743 -110650111 + AluY SINE Alu 3 266 -45 24 0 0 0 chr2 140038747 140038771 -110649083 + AT_rich Low_complexity Low_complexity 1 24 0 543 327 190 19 chr2 140038868 140039299 -110648555 + L2 LINE L2 2805 3309 -4 232 64 43 21 chr2 140039705 140039752 -110648102 + (TAAAAA)n Simple_repeat Simple_repeat 3 50 0 1034 144 80 49 chr2 140041285 140041548 -110646306 + L1MCa LINE L1 1806 2076 -4350 2601 221 29 8 chr2 140041552 140042331 -110645523 - L1MCa LINE L1 -3126 3300 2485 1738 206 56 40 chr2 140042331 140042758 -110645096 - Tigger2a DNA MER2_type 0 434 1 2601 221 29 8 chr2 140042758 140043185 -110644669 - L1MCa LINE L1 -3941 2485 2068 * 6579 220 39 64 chr2 140043180 140045111 -110642743 + L1P LINE L1 1853 3728 -2418 271 22 0 65 chr2 140045111 140045157 -110642697 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 6579 220 39 64 chr2 140045157 140045326 -110642528 + L1P LINE L1 3728 3900 -2246 993 117 11 17 chr2 140045326 140045505 -110642349 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 647 283 163 47 chr2 140045878 140046344 -110641510 - MLT1H LTR MaLR -17 532 13 2033 140 7 10 chr2 140046638 140046946 -110640908 + AluSx SINE Alu 3 309 -3 240 174 163 61 chr2 140046953 140047051 -110640803 - Charlie8 DNA MER1_type -2290 127 20 2124 108 4 0 chr2 140047551 140047873 -110639981 - AluSg SINE Alu 0 325 3 22 0 0 0 chr2 140048329 140048351 -110639503 + AT_rich Low_complexity Low_complexity 1 22 0 690 122 48 7 chr2 140049822 140050134 -110637720 + GA-rich Low_complexity Low_complexity 1 325 0 490 301 67 14 chr2 140051259 140051468 -110636386 - L3 LINE CR1 -3 1574 1355 212 382 11 11 chr2 140052435 140052524 -110635330 + MIR SINE MIR 6 94 -168 839 298 57 31 chr2 140052573 140052956 -110634898 + MLT1I LTR MaLR 3 395 -14 2072 132 0 6 chr2 140053055 140053366 -110634488 - AluSc SINE Alu 0 309 1 1872 204 31 65 chr2 140053748 140054224 -110633630 - MLT1C LTR MaLR -7 460 1 258 81 0 0 chr2 140054477 140054514 -110633340 + (TG)n Simple_repeat Simple_repeat 1 37 0 1976 140 3 3 chr2 140054841 140055134 -110632720 + AluSx SINE Alu 1 293 -19 1679 129 115 0 chr2 140055327 140055606 -110632248 - AluSx SINE Alu -1 311 1 196 375 88 0 chr2 140056456 140056592 -110631262 - L3b LINE CR1 -11 1572 1425 18079 107 2 3 chr2 140056612 140060073 -110627781 - L1PA7 LINE L1 0 6154 2695 4437 93 5 2 chr2 140060073 140060715 -110627139 + L1PA7 LINE L1 2051 2694 -3452 1973 151 0 3 chr2 140060773 140061084 -110626770 - AluSx SINE Alu 0 312 3 484 185 159 45 chr2 140061123 140061280 -110626574 - MER5A DNA MER1_type -6 183 9 2102 130 48 25 chr2 140062850 140063204 -110624650 + THE1B LTR MaLR 1 362 -2 11148 114 4 3 chr2 140063204 140064779 -110623075 + THE1B-int LTR MaLR 2 1580 0 698 243 24 12 chr2 140064782 140064951 -110622903 + MLT1C LTR MaLR 297 467 0 414 0 0 0 chr2 140066239 140066285 -110621569 + (CA)n Simple_repeat Simple_repeat 2 47 0 1997 150 0 7 chr2 140067460 140067767 -110620087 + AluSg SINE Alu 3 307 -3 181 361 53 38 chr2 140067805 140067938 -110619916 + L2 LINE L2 2670 2804 -510 1534 187 48 3 chr2 140068741 140069030 -110618824 + AluJb SINE Alu 1 302 -10 333 333 19 0 chr2 140070088 140070196 -110617658 + MIR SINE MIR 11 120 -142 2106 178 8 5 chr2 140070372 140070759 -110617095 - MLT1B LTR MaLR -2 388 1 288 259 12 0 chr2 140071192 140071273 -110616581 - MIR SINE MIR -1 261 180 185 222 0 97 chr2 140071626 140071698 -110616156 - MIR SINE MIR -134 128 64 2078 144 0 0 chr2 140072096 140072395 -110615459 + AluSx SINE Alu 1 299 -13 212 402 8 16 chr2 140073425 140073552 -110614302 - L2 LINE L2 -167 3105 2980 1750 162 71 71 chr2 140074341 140074761 -110613093 + MSTB1 LTR MaLR 1 420 -12 552 192 12 105 chr2 140074868 140075040 -110612814 + L1MA10 LINE L1 6178 6333 -1 2154 117 3 0 chr2 140076057 140076348 -110611506 - AluSc SINE Alu -17 292 1 185 0 0 39 chr2 140076570 140076596 -110611258 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 315 71 0 0 chr2 140076871 140076913 -110610941 + (A)n Simple_repeat Simple_repeat 1 42 0 204 143 0 0 chr2 140076993 140077035 -110610819 + (TG)n Simple_repeat Simple_repeat 1 42 0 216 340 10 10 chr2 140077245 140077345 -110610509 + MIR SINE MIR 148 247 -15 1851 147 3 27 chr2 140080852 140081152 -110606702 - AluJo SINE Alu -19 293 1 545 221 76 8 chr2 140081428 140081559 -110606295 + MLT1I LTR MaLR 2 141 -268 260 25 150 0 chr2 140081670 140081754 -110606100 + L1PA3 LINE L1 6107 6196 0 369 280 160 13 chr2 140081754 140081904 -110605950 + MLT1I LTR MaLR 232 403 -6 7788 15 0 0 chr2 140082315 140083563 -110604291 + L1PA3 LINE L1 4921 6168 0 191 111 0 28 chr2 140086154 140086190 -110601664 + (GAA)n Simple_repeat Simple_repeat 2 36 0 270 56 0 0 chr2 140086220 140086256 -110601598 + (TGG)n Simple_repeat Simple_repeat 3 38 0 2414 113 31 3 chr2 140086953 140087307 -110600547 - THE1B LTR MaLR 0 364 1 2276 197 22 75 chr2 140087504 140088089 -110599765 - MLT2B3 LTR ERVL 0 554 1 1768 172 0 10 chr2 140088920 140089223 -110598631 - AluJo SINE Alu -12 300 1 625 251 99 0 chr2 140089449 140089620 -110598234 + MER5A DNA MER1_type 2 189 0 1134 195 46 29 chr2 140091750 140092057 -110595797 - MER33 DNA MER1_type -11 313 2 2107 129 129 16 chr2 140092432 140092811 -110595043 + MSTA LTR MaLR 7 428 0 245 302 243 15 chr2 140093334 140093536 -110594318 + Charlie2a DNA MER1_type 186 433 -2349 2067 260 30 21 chr2 140093618 140094180 -110593674 + MLT1E2 LTR MaLR 60 626 0 782 261 42 58 chr2 140094183 140094513 -110593341 + Charlie2a DNA MER1_type 495 819 -2043 289 275 11 22 chr2 140094725 140094816 -110593038 - MERVL LTR ERVL -971 4514 4425 1121 362 22 24 chr2 140094942 140095253 -110592601 - MERVL LTR ERVL -1333 4321 4010 2381 79 0 0 chr2 140095253 140095544 -110592310 - AluY SINE Alu -20 291 1 1121 362 22 24 chr2 140095544 140095828 -110592026 - MERVL LTR ERVL -1644 4010 3727 255 314 29 67 chr2 140096116 140096326 -110591528 - MERVL LTR ERVL -2325 3439 3238 560 334 57 35 chr2 140096512 140097003 -110590851 - MERVL LTR ERVL -2766 2998 2497 274 384 45 5 chr2 140097091 140097289 -110590565 - MERVL LTR ERVL -3337 2317 2112 2283 224 42 22 chr2 140098940 140099481 -110588373 - MLT2B3 LTR ERVL -2 552 1 209 286 29 14 chr2 140099908 140099978 -110587876 - MIR SINE MIR -55 153 83 269 107 27 27 chr2 140101079 140101091 -110586763 + (TA)n Simple_repeat Simple_repeat 2 13 -63 3403 185 48 11 chr2 140101091 140101820 -110586034 - L1MD1 LINE L1 -6 6236 5481 269 107 27 27 chr2 140101820 140101882 -110585972 + (TA)n Simple_repeat Simple_repeat 12 76 0 234 208 0 21 chr2 140101899 140101962 -110585892 + (TATATG)n Simple_repeat Simple_repeat 1 61 0 2408 227 70 27 chr2 140101995 140103113 -110584741 - L1MD1 LINE L1 -743 5403 4316 367 228 142 8 chr2 140103252 140103379 -110584475 - MLT1H LTR MaLR 0 549 406 205 68 45 23 chr2 140105764 140105808 -110582046 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 2025 128 0 0 chr2 140105811 140106101 -110581753 - AluSx SINE Alu 0 312 23 455 318 94 49 chr2 140106222 140106445 -110581409 + MIR SINE MIR 30 262 0 2364 109 0 0 chr2 140106462 140106764 -110581090 + AluSq SINE Alu 3 304 -9 21 0 0 0 chr2 140106874 140106895 -110580959 + AT_rich Low_complexity Low_complexity 1 21 0 25 65 0 0 chr2 140107532 140107578 -110580276 + AT_rich Low_complexity Low_complexity 1 46 0 204 327 0 0 chr2 140107655 140107710 -110580144 - L2 LINE L2 -9 3304 3250 14131 134 32 24 chr2 140107882 140110256 -110577598 + L1P LINE L1 2832 5231 -915 363 23 0 0 chr2 140110256 140110300 -110577554 + (CA)n Simple_repeat Simple_repeat 1 44 0 14131 134 32 24 chr2 140110300 140110427 -110577427 + L1P LINE L1 5231 5355 -791 1367 201 0 24 chr2 140110428 140110682 -110577172 - AluJo SINE Alu -56 256 9 2227 110 0 0 chr2 140111545 140111844 -110576010 + AluSg SINE Alu 1 299 -11 24 53 0 0 chr2 140112134 140112172 -110575682 + AT_rich Low_complexity Low_complexity 1 38 0 30 45 0 0 chr2 140112509 140112553 -110575301 + AT_rich Low_complexity Low_complexity 1 44 0 207 0 0 0 chr2 140113539 140113562 -110574292 + (TTGG)n Simple_repeat Simple_repeat 2 24 0 361 349 31 31 chr2 140113618 140113813 -110574041 + MIR3 SINE MIR 14 208 0 250 231 58 29 chr2 140114939 140115043 -110572811 - L1ME4a LINE L1 -59 6062 5956 2004 157 62 48 chr2 140115640 140116003 -110571851 - MSTB LTR MaLR 0 426 55 2277 107 7 0 chr2 140116003 140116302 -110571552 - AluSx SINE Alu -8 304 4 2004 157 62 48 chr2 140116302 140116358 -110571496 - MSTB LTR MaLR -371 55 1 2044 131 44 0 chr2 140116825 140117122 -110570732 - AluSg SINE Alu 0 310 1 320 399 28 14 chr2 140117124 140117337 -110570517 + HAL1 LINE L1 450 665 -1842 377 244 0 26 chr2 140117755 140117870 -110569984 + HAL1 LINE L1 2311 2422 -85 1956 130 7 10 chr2 140117902 140118195 -110569659 + AluSx SINE Alu 11 302 -10 1943 168 0 9 chr2 140118306 140118621 -110569233 - AluJb SINE Alu 0 312 1 27 29 0 0 chr2 140118717 140118751 -110569103 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 140118787 140118809 -110569045 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 140119075 140119098 -110568756 + AT_rich Low_complexity Low_complexity 1 23 0 346 208 13 13 chr2 140120281 140120358 -110567496 - L1ME2 LINE L1 -19 6563 6487 3069 148 39 38 chr2 140120358 140121144 -110566710 + pTR5 LTR ERV1 6 2025 -413 312 214 0 36 chr2 140121144 140121228 -110566626 + LTR30 LTR ERV1 544 624 -98 2260 90 21 3 chr2 140121228 140121563 -110566291 + pTR5 LTR ERV1 52 392 -2046 1771 255 53 70 chr2 140121563 140121867 -110565987 - L1ME2 LINE L1 -92 6490 6182 1733 118 157 3 chr2 140121867 140122180 -110565674 - MER46B DNA MER2_type 0 236 1 1771 255 53 70 chr2 140122180 140122412 -110565442 - L1ME2 LINE L1 -400 6182 5948 2109 199 74 13 chr2 140122412 140122885 -110564969 + MLT1D LTR MaLR 1 502 -3 1771 255 53 70 chr2 140122885 140123231 -110564623 - L1ME2 LINE L1 -634 5948 5598 2247 108 3 0 chr2 140123231 140123536 -110564318 - AluSp SINE Alu -7 306 1 1771 255 53 70 chr2 140123536 140123644 -110564210 - L1ME2 LINE L1 -984 5598 5490 2285 107 3 0 chr2 140123644 140123953 -110563901 - AluSg SINE Alu 0 310 1 1771 255 53 70 chr2 140123953 140124113 -110563741 - L1ME2 LINE L1 -1092 5490 5365 5902 144 0 5 chr2 140124133 140125562 -110562292 - L1PB1 LINE L1 -36 6115 4694 1215 214 18 12 chr2 140125566 140125893 -110561961 + L1PB1 LINE L1 4356 4684 -1462 599 251 12 12 chr2 140125896 140126067 -110561787 - L1ME2 LINE L1 -1194 5370 5200 1426 272 60 63 chr2 140126262 140127288 -110560566 - L1ME2 LINE L1 -1887 4677 3656 451 267 8 8 chr2 140127281 140127412 -110560442 - L1ME2 LINE L1 -3475 3089 2959 * 1202 264 52 30 chr2 140127469 140127875 -110559979 - L1ME2 LINE L1 -5630 415 1 391 263 57 57 chr2 140127895 140128142 -110559712 - L1MDb LINE L1 -4535 2072 1826 25 51 0 0 chr2 140128190 140128229 -110559625 + AT_rich Low_complexity Low_complexity 1 39 0 891 125 7 7 chr2 140128311 140128447 -110559407 - MSTB1 LTR MaLR 0 432 297 494 103 0 0 chr2 140128461 140128529 -110559325 - MSTB LTR MaLR -358 68 1 324 274 79 15 chr2 140128529 140128808 -110559046 - L1MDb LINE L1 -4920 1506 1140 711 343 60 47 chr2 140128848 140129773 -110558081 - L1MDb LINE L1 -5422 1185 248 277 265 35 113 chr2 140130180 140130410 -110557444 - L1ME LINE L1 -5539 531 320 21 0 0 0 chr2 140130736 140130757 -110557097 + AT_rich Low_complexity Low_complexity 1 21 0 778 332 86 49 chr2 140131112 140131247 -110556607 - L2 LINE L2 -1 3312 3184 249 83 0 0 chr2 140131247 140131283 -110556571 + (CA)n Simple_repeat Simple_repeat 1 36 0 778 332 86 49 chr2 140131283 140131299 -110556555 - L2 LINE L2 -129 3184 3170 234 0 0 0 chr2 140131299 140131325 -110556529 + (TA)n Simple_repeat Simple_repeat 2 27 0 778 332 86 49 chr2 140131325 140131888 -110555966 - L2 LINE L2 -143 3170 2562 251 73 24 0 chr2 140132265 140132306 -110555548 + MADE1 DNA Mariner 2 43 -37 260 57 0 0 chr2 140132358 140132393 -110555461 + MADE1 DNA Mariner 27 61 -19 502 71 0 60 chr2 140132445 140132529 -110555325 + MADE1 DNA Mariner 2 80 0 650 307 28 0 chr2 140133981 140134157 -110553697 + MER5A DNA MER1_type 9 189 0 242 241 0 0 chr2 140134159 140134213 -110553641 - MER5A DNA MER1_type -93 96 43 1660 216 53 58 chr2 140134345 140134735 -110553119 + LTR24B LTR ERV1 1 378 -198 2993 61 0 0 chr2 140134735 140135111 -110552743 + L1PA7 LINE L1 5763 6138 -16 1660 216 53 58 chr2 140135111 140135303 -110552551 + LTR24B LTR ERV1 378 569 -7 2344 177 17 2 chr2 140136817 140137223 -110550631 - MSTC LTR MaLR 0 428 17 21 36 0 0 chr2 140138053 140138081 -110549773 + AT_rich Low_complexity Low_complexity 1 28 0 2370 166 16 26 chr2 140138105 140138528 -110549326 + MSTA LTR MaLR 1 419 -9 337 244 13 0 chr2 140138861 140138939 -110548915 - MER31A LTR ERV1 -399 86 8 334 306 66 23 chr2 140140182 140140588 -110547266 - L1ME LINE L1 -532 5630 5202 2139 119 20 3 chr2 140140746 140141040 -110546814 - AluSc SINE Alu -10 299 1 359 342 78 7 chr2 140141277 140141572 -110546282 - L1ME LINE L1 -2023 4123 3808 1855 123 60 3 chr2 140141765 140142049 -110545805 - AluSq SINE Alu -13 300 1 2222 106 0 10 chr2 140142069 140142371 -110545483 - AluSx SINE Alu -13 299 1 1516 165 62 109 chr2 140142586 140143053 -110544801 - MER65A LTR ERV1 0 445 1 1763 241 46 11 chr2 140143053 140143510 -110544344 - MER65A-int LTR ERV1 0 4871 4399 1462 231 72 13 chr2 140143539 140143928 -110543926 - MER65A-int LTR ERV1 -855 4016 3605 1333 225 44 16 chr2 140144079 140144443 -110543411 - MER65A-int LTR ERV1 -1529 3342 2969 521 251 74 26 chr2 140144436 140144713 -110543141 - MER65A-int LTR ERV1 -1497 5101 3087 * 498 246 95 35 chr2 140144707 140144986 -110542868 - MER65A-int LTR ERV1 -1902 3034 2493 * 1033 174 53 60 chr2 140144995 140145276 -110542578 - L1MA10 LINE L1 -13 6321 6043 1089 189 32 47 chr2 140145276 140145671 -110542183 - MER65A-int LTR ERV1 -2187 4144 3734 641 253 30 39 chr2 140145756 140145989 -110541865 - MER65A-int LTR ERV1 -2869 3729 3499 526 190 11 75 chr2 140146233 140146407 -110541447 - MER65A-int LTR ERV1 -3129 3469 3307 6429 228 59 49 chr2 140146434 140148579 -110539275 - MER65A-int LTR ERV1 -2696 2175 11 2588 147 7 33 chr2 140148585 140149042 -110538812 - MER65A LTR ERV1 0 445 1 1090 214 172 3 chr2 140149920 140150210 -110537644 - MER2 DNA MER2_type -1 344 6 257 333 0 0 chr2 140150321 140150390 -110537464 + polypyrimidine Low_complexity Low_complexity 4 72 0 214 420 51 11 chr2 140150448 140150624 -110537230 + MIR SINE MIR 6 188 -74 1837 147 0 10 chr2 140151068 140151433 -110536421 - AluJb SINE Alu 0 362 1 24 53 0 0 chr2 140151797 140151835 -110536019 + AT_rich Low_complexity Low_complexity 1 38 0 199 261 87 0 chr2 140153583 140153652 -110534202 - MIR SINE MIR -58 204 130 737 133 0 0 chr2 140153660 140153780 -110534074 - L1MA2 LINE L1 -2 6302 6183 6102 36 3 9 chr2 140153780 140154552 -110533302 + L1P LINE L1 1415 2181 -3965 25 83 0 0 chr2 140155063 140155123 -110532731 + AT_rich Low_complexity Low_complexity 1 60 0 221 373 63 8 chr2 140156929 140157055 -110530799 - L2 LINE L2 -2 3311 3179 500 300 13 0 chr2 140157752 140157902 -110529952 - L1MEc LINE L1 -6044 352 201 658 267 0 0 chr2 140157915 140158050 -110529804 + MER20 DNA MER1_type 84 218 -1 228 143 0 0 chr2 140160187 140160222 -110527632 + (TTTTC)n Simple_repeat Simple_repeat 5 39 0 488 116 12 0 chr2 140160225 140160311 -110527543 + (CTATT)n Simple_repeat Simple_repeat 4 90 0 1439 224 19 22 chr2 140160467 140160833 -110527021 - L1MB8 LINE L1 0 6178 5814 5467 166 30 14 chr2 140160855 140161529 -110526325 - L1MA4A LINE L1 -7 6998 6336 2220 91 3 0 chr2 140161529 140161827 -110526027 + AluY SINE Alu 1 299 -12 5467 166 30 14 chr2 140161827 140162869 -110524985 - L1MA4A LINE L1 -669 6336 5257 4594 198 73 7 chr2 140162865 140163986 -110523868 - L1MA4A LINE L1 -2513 4335 3141 * 7169 251 24 24 chr2 140163990 140165792 -110522062 - L1MA4A LINE L1 -5048 1801 1 2522 202 15 39 chr2 140165792 140166489 -110521365 - L1MB8 LINE L1 -341 5837 5170 4005 154 25 1 chr2 140166489 140167210 -110520644 - L1MA8 LINE L1 -1 6290 5553 2522 202 15 39 chr2 140167210 140167397 -110520457 - L1MB8 LINE L1 -1008 5170 4980 1540 65 0 56 chr2 140168960 140169174 -110518680 + AluY SINE Alu 89 290 -21 340 43 0 0 chr2 140169180 140169227 -110518627 + AluY SINE Alu 254 300 0 1107 181 172 8 chr2 140169317 140169555 -110518299 + MLT1A1 LTR MaLR 89 365 0 208 361 60 23 chr2 140170813 140170946 -110516908 - MER5A DNA MER1_type -49 140 3 22 0 0 0 chr2 140171677 140171699 -110516155 + AT_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr2 140172094 140172129 -110515725 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 140172255 140172278 -110515576 + AT_rich Low_complexity Low_complexity 1 23 0 259 225 150 8 chr2 140172527 140172647 -110515207 - L1ME LINE L1 -297 5824 5688 230 218 73 0 chr2 140173568 140173623 -110514231 + MER94 DNA DNA 4 62 -72 2085 92 7 14 chr2 140173711 140174015 -110513839 + AluSx SINE Alu 4 305 0 5299 64 4 13 chr2 140174115 140174814 -110513040 - MER11C LTR ERVK -378 693 1 2156 108 0 3 chr2 140175153 140175462 -110512392 + AluSq SINE Alu 1 308 0 364 295 66 33 chr2 140176097 140176280 -110511574 - MIR SINE MIR 0 262 74 342 289 12 0 chr2 140178652 140178735 -110509119 + L2 LINE L2 3230 3313 0 262 302 123 0 chr2 140180166 140180272 -110507582 + L2 LINE L2 3192 3310 -3 2296 107 0 0 chr2 140181799 140182099 -110505755 + AluSx SINE Alu 1 300 -12 207 284 25 62 chr2 140182630 140182711 -110505143 + MIR3 SINE MIR 120 197 -11 245 241 0 0 chr2 140183238 140183292 -110504562 + CT-rich Low_complexity Low_complexity 2 55 0 622 231 36 20 chr2 140183680 140183875 -110503979 + MER65A-int LTR ERV1 1546 1743 -6377 8308 153 48 11 chr2 140183905 140184198 -110503656 - L1PBa LINE L1 -3785 3077 2796 315 0 0 0 chr2 140184198 140184233 -110503621 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2195 68 4 7 chr2 140184236 140184517 -110503337 - AluY SINE Alu -31 280 1 8308 153 48 11 chr2 140184517 140185841 -110502013 - L1PBa LINE L1 -4067 2795 1394 767 215 6 0 chr2 140185863 140186026 -110501828 - L1PBa LINE L1 -6694 169 6 5826 233 89 52 chr2 140186196 140188693 -110499161 + MER65A-int LTR ERV1 2805 4865 -6 2039 189 27 25 chr2 140188698 140189142 -110498712 + MER65A LTR ERV1 1 445 0 310 216 0 20 chr2 140189642 140189744 -110498110 + CT-rich Low_complexity Low_complexity 1 100 0 367 322 78 78 chr2 140189940 140190288 -110497566 - MLT2E LTR ERVL -280 348 1 10693 215 52 19 chr2 140190387 140192435 -110495419 - L1MA7 LINE L1 0 6495 4266 1935 149 7 0 chr2 140192435 140192731 -110495123 + AluSx SINE Alu 1 298 -14 10693 215 52 19 chr2 140192731 140194442 -110493412 - L1MA7 LINE L1 -2229 4266 2612 1356 114 0 5 chr2 140194442 140194681 -110493173 - AluY SINE Alu 0 329 92 2217 284 72 60 chr2 140194681 140196404 -110491450 - L1MA7 LINE L1 -4241 2110 672 1191 320 39 29 chr2 140196552 140197074 -110490780 - L1M3a LINE L1 -5242 713 11 2024 151 0 0 chr2 140197502 140197807 -110490047 + AluSg SINE Alu 1 305 -5 292 297 46 17 chr2 140198268 140198381 -110489473 + MER5A DNA MER1_type 39 163 -26 210 162 59 73 chr2 140198388 140198456 -110489398 + MER91C DNA MER1_type 17 83 -57 378 272 68 10 chr2 140198716 140198819 -110489035 + L2 LINE L2 3189 3297 -16 230 365 64 59 chr2 140198836 140199055 -110488799 - L2 LINE L2 -4 3268 3049 380 332 179 55 chr2 140199913 140200555 -110487299 - L2 LINE L2 -523 2791 2070 33 43 0 0 chr2 140201696 140201743 -110486111 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr2 140201900 140201921 -110485933 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr2 140202037 140202071 -110485783 + (CA)n Simple_repeat Simple_repeat 2 35 0 428 0 19 0 chr2 140202539 140202591 -110485263 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 339 362 59 50 chr2 140202608 140202948 -110484906 + L2 LINE L2 2971 3313 0 274 285 117 60 chr2 140203535 140204069 -110483785 + L1MCc LINE L1 23 581 -5842 6015 158 28 5 chr2 140204447 140206349 -110481505 + L1MA3 LINE L1 4291 6239 -66 375 313 88 0 chr2 140206379 140206539 -110481315 + L1MCc LINE L1 1168 1341 -5082 5416 207 16 30 chr2 140206571 140207367 -110480487 + L1 LINE L1 4010 4784 -1362 225 0 0 0 chr2 140207367 140207392 -110480462 + (CAA)n Simple_repeat Simple_repeat 2 26 0 5416 207 16 30 chr2 140207392 140207871 -110479983 + L1 LINE L1 4784 5268 -878 292 342 56 43 chr2 140208379 140208610 -110479244 + MIR SINE MIR 29 262 0 2128 202 37 5 chr2 140208764 140208969 -110478885 + MSTB LTR MaLR 4 201 -225 282 29 0 0 chr2 140208969 140209004 -110478850 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2128 202 37 5 chr2 140209004 140209208 -110478646 + MSTB LTR MaLR 201 426 0 8094 191 32 26 chr2 140209208 140210849 -110477005 + MSTB-int LTR MaLR 1 1651 0 2135 187 36 14 chr2 140210849 140211266 -110476588 + MSTB LTR MaLR 1 426 0 1557 326 103 51 chr2 140211887 140213230 -110474624 + L3 LINE CR1 141 1552 -25 452 115 0 13 chr2 140213327 140213405 -110474449 + (TTCC)n Simple_repeat Simple_repeat 3 79 0 1644 144 23 8 chr2 140213407 140213671 -110474183 - AluSx SINE Alu -44 268 1 23 68 0 0 chr2 140213677 140213721 -110474133 + AT_rich Low_complexity Low_complexity 1 44 0 1193 104 0 0 chr2 140214018 140214191 -110473663 - L1MA2 LINE L1 0 6304 6132 329 98 0 39 chr2 140214213 140214264 -110473590 + MER75 DNA T2_type 453 501 -3 1788 137 32 3 chr2 140214276 140214590 -110473264 - L1MA2 LINE L1 -175 6129 5807 27 29 0 0 chr2 140214825 140214859 -110472995 + AT_rich Low_complexity Low_complexity 1 34 0 1078 253 24 32 chr2 140214992 140215619 -110472235 + L1ME1 LINE L1 4728 5442 -722 4245 283 62 18 chr2 140215621 140215658 -110472196 + L1MEc LINE L1 36 70 -6326 5958 104 22 7 chr2 140215658 140217168 -110470686 + L1PA10 LINE L1 4645 6168 0 4245 283 62 18 chr2 140217168 140218761 -110469093 + L1MEc LINE L1 70 1737 -4659 493 311 101 20 chr2 140218768 140219016 -110468838 + L2 LINE L2 2889 3156 -157 415 206 21 0 chr2 140219043 140219140 -110468714 + L1ME3A LINE L1 6051 6149 -21 697 171 0 8 chr2 140219151 140219274 -110468580 + FLAM_C SINE Alu 10 131 -12 775 165 0 0 chr2 140219380 140219507 -110468347 + FLAM_C SINE Alu 1 127 -6 2157 258 48 28 chr2 140219709 140220431 -110467423 + L1ME1 LINE L1 5420 6156 -10 324 254 139 74 chr2 140221288 140221492 -110466362 + MIR SINE MIR 5 220 -42 364 319 126 46 chr2 140222267 140222505 -110465349 + MIR SINE MIR 3 259 -3 505 309 99 39 chr2 140223072 140223354 -110464500 - L2 LINE L2 -1 3312 3014 1071 314 118 11 chr2 140223535 140224061 -110463793 - L2 LINE L2 -443 2871 2290 256 331 146 17 chr2 140224351 140224529 -110463325 - MIR SINE MIR -16 246 46 21 0 0 0 chr2 140226635 140226656 -110461198 + AT_rich Low_complexity Low_complexity 1 21 0 272 181 28 0 chr2 140227098 140227170 -110460684 - L1ME4a LINE L1 -6 6115 6042 264 170 149 0 chr2 140227376 140227423 -110460431 - Tigger5 DNA MER2_type -2268 55 2 242 298 119 30 chr2 140227426 140227661 -110460193 - L1ME LINE L1 -294 5827 5572 30 27 0 0 chr2 140227683 140227720 -110460134 + AT_rich Low_complexity Low_complexity 1 37 0 264 364 149 19 chr2 140228506 140228883 -110458971 - L2 LINE L2 -213 3059 2624 728 218 28 0 chr2 140228893 140229035 -110458819 + MER106B DNA MER1_type 4 149 -910 30 69 0 0 chr2 140229070 140229128 -110458726 + AT_rich Low_complexity Low_complexity 1 58 0 1394 215 0 8 chr2 140229411 140229676 -110458178 + Tigger7 DNA MER2_type 1 263 -2224 618 156 0 10 chr2 140229678 140229774 -110458080 + Tigger7 DNA MER2_type 2491 2585 -2 410 130 30 10 chr2 140230300 140230400 -110457454 + (TA)n Simple_repeat Simple_repeat 2 103 0 261 273 0 0 chr2 140230447 140230543 -110457311 + (TA)n Simple_repeat Simple_repeat 1 96 0 21 36 0 0 chr2 140230582 140230610 -110457244 + AT_rich Low_complexity Low_complexity 1 28 0 2469 130 41 14 chr2 140230719 140231135 -110456719 + MSTA LTR MaLR 2 428 0 8584 181 26 16 chr2 140231135 140232770 -110455084 + MSTA-int LTR MaLR 1 1651 0 2280 169 41 5 chr2 140232770 140233183 -110454671 + MSTA LTR MaLR 1 428 0 533 339 50 19 chr2 140233382 140233704 -110454150 - L1M4 LINE L1 -3435 2711 2380 882 253 94 43 chr2 140233735 140234120 -110453734 + L1ME3A LINE L1 5477 5883 -287 2145 125 10 3 chr2 140234381 140234686 -110453168 + AluSx SINE Alu 1 307 -5 659 355 84 39 chr2 140234695 140235833 -110452021 + L1M4 LINE L1 3953 5142 -1004 1513 211 37 8 chr2 140236572 140236923 -110450931 - MLT1A1 LTR MaLR 0 365 5 885 295 69 21 chr2 140237086 140237418 -110450436 + LTR16B LTR ERVL 103 450 -14 356 227 117 52 chr2 140238831 140238985 -110448869 + MIR SINE MIR 99 262 0 288 130 0 0 chr2 140239700 140239746 -110448108 + (TG)n Simple_repeat Simple_repeat 2 47 0 1387 222 26 24 chr2 140240278 140240656 -110447198 - L1MC2 LINE L1 -8 6336 5958 19407 174 34 15 chr2 140240693 140243894 -110443960 - L1MA2 LINE L1 0 7723 4584 1594 62 0 9 chr2 140243894 140244104 -110443750 + L1PA5 LINE L1 5945 6152 -2 19407 174 34 15 chr2 140244104 140248462 -110439392 - L1MA2 LINE L1 -3139 4584 8 2383 213 12 0 chr2 140248444 140248955 -110438899 - L1MC2 LINE L1 -370 5974 5458 * 225 0 0 0 chr2 140248957 140248982 -110438872 + (TG)n Simple_repeat Simple_repeat 2 26 0 4620 259 61 18 chr2 140249000 140250298 -110437556 - L1MC2 LINE L1 -1065 5081 3686 3116 165 134 46 chr2 140250298 140251057 -110436797 + LTR1B LTR ERV1 1 826 0 4620 259 61 18 chr2 140251057 140251516 -110436338 - L1MC2 LINE L1 -2460 3686 3248 238 195 37 37 chr2 140252904 140252986 -110434868 + A-rich Low_complexity Low_complexity 5 86 0 261 306 165 25 chr2 140253540 140253623 -110434231 + MER5B DNA MER1_type 33 140 -38 396 0 0 0 chr2 140253623 140253667 -110434187 + (CA)n Simple_repeat Simple_repeat 1 44 0 261 306 165 25 chr2 140253667 140253704 -110434150 + MER5B DNA MER1_type 140 170 -8 938 196 0 17 chr2 140253823 140254002 -110433852 - AluJb SINE Alu -2 310 135 4591 144 18 40 chr2 140254004 140254265 -110433589 - L1PB1 LINE L1 -126 6741 6476 591 112 0 0 chr2 140254265 140254354 -110433500 + (CA)n Simple_repeat Simple_repeat 2 90 0 4591 144 18 40 chr2 140254354 140255071 -110432783 - L1PB1 LINE L1 -391 6476 5785 323 197 0 0 chr2 140255071 140255137 -110432717 - MSTA LTR MaLR 0 428 363 3771 147 4 62 chr2 140255151 140255844 -110432010 - THE1C-int LTR MaLR -923 657 5 990 224 43 28 chr2 140255848 140256103 -110431751 - THE1C LTR MaLR 0 375 117 11474 151 45 18 chr2 140256103 140258932 -110428922 - L1PB1 LINE L1 -3044 3818 909 1048 184 0 10 chr2 140258938 140259134 -110428720 - L1PB1 LINE L1 -6669 194 1 1247 224 19 30 chr2 140259304 140259568 -110428286 + Tigger5 DNA MER2_type 1 261 -2062 * 2140 167 152 11 chr2 140259565 140260020 -110427834 + Tigger5 DNA MER2_type 1805 2323 0 7264 70 4 6 chr2 140262555 140263501 -110424353 - MER11C LTR ERVK 0 1071 128 232 209 11 44 chr2 140263606 140263697 -110424157 + C-rich Low_complexity Low_complexity 2 89 0 554 201 71 19 chr2 140263874 140264028 -110423826 - L1MC1 LINE L1 -245 6088 5927 1693 216 153 40 chr2 140264036 140264564 -110423290 - L1MCa LINE L1 -5817 609 22 196 356 26 0 chr2 140265902 140266017 -110421837 + L3b LINE CR1 1102 1219 -364 266 351 30 54 chr2 140266194 140266362 -110421492 + MIR SINE MIR 3 166 -96 421 189 48 200 chr2 140266607 140266877 -110420977 - MIR SINE MIR 0 262 34 2080 108 0 11 chr2 140268487 140268773 -110419081 - AluSc SINE Alu -26 283 1 414 360 16 28 chr2 140269111 140269218 -110418636 - MIR SINE MIR -5 257 150 4409 129 7 13 chr2 140269218 140269913 -110417941 + LTR8 LTR ERV1 1 691 0 414 360 16 28 chr2 140269913 140270058 -110417796 - MIR SINE MIR -112 150 8 2039 161 22 39 chr2 140270187 140270597 -110417257 + MER57A LTR ERV1 1 403 0 2041 139 3 0 chr2 140270856 140271151 -110416703 + AluSq SINE Alu 1 296 -17 4926 86 148 4 chr2 140271164 140271886 -110415968 + LTR12 LTR ERV1 1 826 0 225 324 128 0 chr2 140273871 140273973 -110413881 - MIR SINE MIR -78 184 70 3126 166 40 66 chr2 140273973 140274743 -110413111 + LTR1B LTR ERV1 1 785 0 307 191 112 84 chr2 140274925 140275109 -110412745 + LTR38 LTR ERV1 90 327 -283 509 242 55 50 chr2 140275136 140275355 -110412499 + LTR36 LTR ERV1 392 611 0 2149 110 7 0 chr2 140275645 140275945 -110411909 + AluSp SINE Alu 1 302 -11 348 24 0 0 chr2 140276039 140276080 -110411774 + (CA)n Simple_repeat Simple_repeat 2 42 0 317 321 8 8 chr2 140276101 140276232 -110411622 + Charlie8 DNA MER1_type 78 208 -2209 229 235 156 59 chr2 140276455 140276693 -110411161 - HAL1 LINE L1 -424 2083 1823 946 236 113 82 chr2 140276951 140277564 -110410290 - HAL1 LINE L1 -701 1806 1175 1292 254 87 28 chr2 140277564 140278037 -110409817 - MLT1H1 LTR MaLR 0 555 55 298 233 133 0 chr2 140278022 140278112 -110409742 - MLT1H1 LTR MaLR -312 243 142 * 1614 220 6 6 chr2 140278187 140278514 -110409340 - MLT1A2 LTR MaLR 0 374 48 313 232 36 18 chr2 140278720 140278832 -110409022 - L1M4 LINE L1 -6358 184 71 397 280 56 8 chr2 140279142 140279267 -110408587 - MLT1H1 LTR MaLR -424 131 1 274 271 62 52 chr2 140279267 140279477 -110408377 - HAL1 LINE L1 -1328 1179 968 294 214 0 0 chr2 140279483 140279567 -110408287 + (TA)n Simple_repeat Simple_repeat 1 84 0 6692 117 20 7 chr2 140279658 140280860 -110406994 - L1MA1 LINE L1 -2 7719 6502 * 7466 184 21 8 chr2 140280843 140281736 -110406118 - L1MA1 LINE L1 -1449 6116 5190 2320 143 28 0 chr2 140281736 140282100 -110405754 + THE1C LTR MaLR 1 374 -1 7466 184 21 8 chr2 140282100 140282804 -110405050 - L1MA1 LINE L1 -2375 5190 4497 332 188 0 24 chr2 140282783 140282868 -110404986 - L1MA1 LINE L1 -3928 3637 3555 * 27 0 0 0 chr2 140282868 140282895 -110404959 + AT_rich Low_complexity Low_complexity 1 27 0 3812 214 22 12 chr2 140282895 140283829 -110404025 - L1 LINE L1 -3056 4509 3566 522 141 0 0 chr2 140283830 140283950 -110403904 - AluSg/x SINE Alu 0 324 205 234 147 0 0 chr2 140283952 140283986 -110403868 - Alu SINE Alu -261 40 7 17041 175 69 18 chr2 140283991 140284392 -110403462 - L1 LINE L1 -3989 3576 3197 1707 189 10 0 chr2 140284392 140284698 -110403156 + AluSq SINE Alu 1 309 -4 17041 175 69 18 chr2 140284698 140285286 -110402568 - L1 LINE L1 -4368 3197 2641 1946 112 0 0 chr2 140285286 140285544 -110402310 - AluSg SINE Alu -9 301 44 17041 175 69 18 chr2 140285544 140287932 -110399922 - L1 LINE L1 -4924 2641 24 402 327 153 34 chr2 140287968 140288347 -110399507 - HAL1 LINE L1 -1655 852 429 913 296 84 3 chr2 140288372 140288693 -110399161 - HAL1 LINE L1 -2153 354 8 431 284 103 61 chr2 140289060 140289466 -110398388 - L1MDa LINE L1 -1537 5003 4570 295 245 198 0 chr2 140289502 140289608 -110398246 - L1MDa LINE L1 -2073 4467 4341 307 309 69 36 chr2 140289760 140290093 -110397761 - L1MDa LINE L1 -2375 4165 3822 386 329 128 18 chr2 140290343 140290768 -110397086 - L1MDa LINE L1 -861 2040 1696 787 259 129 58 chr2 140290878 140291357 -110396497 - LTR36 LTR ERV1 -9 602 90 266 233 58 42 chr2 140291409 140291529 -110396325 - L1MDa LINE L1 -5061 1469 1348 226 361 46 61 chr2 140291546 140292006 -110395848 - L1MDa LINE L1 -5649 881 429 1646 127 0 4 chr2 140292113 140292358 -110395496 - AluSg1 SINE Alu -10 299 56 2383 55 0 0 chr2 140292482 140292772 -110395082 - AluY SINE Alu -21 290 1 2025 202 60 48 chr2 140293230 140293726 -110394128 + MLT1D LTR MaLR 1 502 -3 389 246 29 6 chr2 140293850 140294025 -110393829 + (TA)n Simple_repeat Simple_repeat 1 179 0 26 0 0 0 chr2 140294469 140294495 -110393359 + AT_rich Low_complexity Low_complexity 1 26 0 1838 241 74 25 chr2 140295172 140295723 -110392131 - LTR48B LTR ERV1 -66 578 1 2615 238 22 22 chr2 140296334 140297022 -110390832 - MER76 LTR ERV 0 688 1 23 0 0 0 chr2 140297093 140297116 -110390738 + AT_rich Low_complexity Low_complexity 1 23 0 2230 103 0 3 chr2 140297739 140298039 -110389815 - AluSx SINE Alu -13 299 1 483 229 163 26 chr2 140298903 140299056 -110388798 + MER5B DNA MER1_type 5 178 0 2464 176 93 10 chr2 140299197 140299713 -110388141 - MER89 LTR ERV1 0 559 1 1143 196 9 0 chr2 140300456 140300681 -110387173 + L1MA9 LINE L1 3752 3978 -2168 * 4820 179 35 3 chr2 140300651 140301569 -110386285 + L1MA9 LINE L1 5362 6308 -4 351 171 114 34 chr2 140301750 140301838 -110386016 - MER58A DNA MER1_type 0 224 130 512 257 40 40 chr2 140301846 140301998 -110385856 - MER58A DNA MER1_type 0 156 5 240 35 0 0 chr2 140303127 140303156 -110384698 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr2 140303488 140303512 -110384342 + AT_rich Low_complexity Low_complexity 1 24 0 578 284 75 35 chr2 140303891 140304145 -110383709 + MLT1E LTR MaLR 1 264 -329 246 300 22 56 chr2 140304163 140304253 -110383601 - L2 LINE L2 -45 3268 3182 * 371 360 34 17 chr2 140304250 140304425 -110383429 + MIR SINE MIR 21 198 -64 396 277 75 32 chr2 140304658 140304846 -110383008 - LTR40b LTR ERVL -78 384 189 236 368 99 41 chr2 140305620 140306030 -110381824 - L2 LINE L2 -216 3056 2599 649 204 56 80 chr2 140306220 140306480 -110381374 + LTR12 LTR ERV1 207 453 -261 23 0 0 0 chr2 140307350 140307373 -110380481 + AT_rich Low_complexity Low_complexity 1 23 0 236 315 0 14 chr2 140307404 140307477 -110380377 - L2 LINE L2 -13 3300 3229 22 0 0 0 chr2 140307500 140307522 -110380332 + AT_rich Low_complexity Low_complexity 1 22 0 221 305 109 46 chr2 140307619 140307793 -110380061 - L2 LINE L2 -238 3034 2850 236 358 11 0 chr2 140308172 140308267 -110379587 - L2 LINE L2 -583 2731 2636 318 342 74 42 chr2 140308637 140309189 -110378665 - L2 LINE L2 -955 2359 1790 826 289 29 21 chr2 140310295 140310534 -110377320 - MLT1J LTR MaLR -61 450 210 2186 283 73 36 chr2 140310547 140312822 -110375032 - L1ME3A LINE L1 -10 6160 3804 22 0 0 0 chr2 140313251 140313273 -110374581 + AT_rich Low_complexity Low_complexity 1 22 0 644 91 10 20 chr2 140313502 140313601 -110374253 + MER4A LTR ERV1 1 98 -566 1461 157 162 90 chr2 140313601 140313978 -110373876 + MER4A LTR ERV1 261 664 0 1299 267 85 56 chr2 140314205 140314781 -110373073 + MLT1E LTR MaLR 1 593 0 21 36 0 0 chr2 140315017 140315045 -110372809 + AT_rich Low_complexity Low_complexity 1 28 0 25 65 0 0 chr2 140315603 140315649 -110372205 + AT_rich Low_complexity Low_complexity 1 46 0 5293 105 35 19 chr2 140315837 140317215 -110370639 - L1PA13 LINE L1 -11 6152 4758 355 355 46 14 chr2 140317245 140317462 -110370392 - L2 LINE L2 -1313 2001 1778 21 0 0 0 chr2 140317925 140317946 -110369908 + AT_rich Low_complexity Low_complexity 1 21 0 738 96 0 4 chr2 140318316 140318536 -110369318 - AluY SINE Alu 0 311 1 312 87 0 0 chr2 140318595 140318641 -110369213 - Tigger3(Golem) DNA MER2_type -405 2624 2579 234 351 131 16 chr2 140319006 140319197 -110368657 + MIR SINE MIR 50 262 0 5170 142 51 36 chr2 140319624 140320613 -110367241 - Tigger3b DNA MER2_type -1 1230 228 239 222 0 0 chr2 140321700 140321745 -110366109 + (TGGA)n Simple_repeat Simple_repeat 3 47 0 261 128 0 0 chr2 140322076 140322123 -110365731 + (GA)n Simple_repeat Simple_repeat 2 48 0 362 318 15 30 chr2 140322139 140322271 -110365583 - L2 LINE L2 -4 3268 3139 221 337 34 22 chr2 140322544 140322633 -110365221 - MIR SINE MIR -117 145 56 186 43 0 0 chr2 140323195 140323218 -110364636 + (GAAAA)n Simple_repeat Simple_repeat 1 23 0 256 310 241 0 chr2 140324312 140324470 -110363384 - MIR SINE MIR -14 248 53 3152 130 35 4 chr2 140324595 140325055 -110362799 + MER1A DNA MER1_type 55 528 -1 261 257 96 37 chr2 140325243 140325379 -110362475 - L1ME4a LINE L1 -19 6102 5959 31 58 0 0 chr2 140325649 140325701 -110362153 + AT_rich Low_complexity Low_complexity 1 52 0 1401 250 48 43 chr2 140326233 140326697 -110361157 - MLT1C LTR MaLR -1 466 1 855 295 103 26 chr2 140326861 140327251 -110360603 - MLT1H LTR MaLR 0 549 130 16245 190 23 5 chr2 140327290 140329033 -110358821 + L1P4 LINE L1 1927 3636 -2525 201 39 0 0 chr2 140329033 140329059 -110358795 + (CAA)n Simple_repeat Simple_repeat 3 28 0 16245 190 23 5 chr2 140329059 140329753 -110358101 + L1P4 LINE L1 3636 4316 -1845 210 71 0 0 chr2 140329753 140329781 -110358073 + (CA)n Simple_repeat Simple_repeat 2 29 0 16245 190 23 5 chr2 140329781 140331102 -110356752 + L1P4 LINE L1 4316 5753 -408 556 222 162 35 chr2 140332389 140332587 -110355267 - MER58A DNA MER1_type -1 223 1 341 240 75 20 chr2 140332587 140332733 -110355121 + L1 LINE L1 4965 5119 -1027 894 206 0 0 chr2 140332786 140332941 -110354913 + FRAM SINE Alu 1 155 -21 2071 186 0 6 chr2 140332978 140333316 -110354538 + MER1B DNA MER1_type 1 336 -1 636 294 0 9 chr2 140333363 140333577 -110354277 + L1MC/D LINE L1 5314 5525 -2283 659 271 35 48 chr2 140335302 140335569 -110352285 + MIR SINE MIR 5 251 -11 213 39 0 0 chr2 140336065 140336091 -110351763 + (A)n Simple_repeat Simple_repeat 1 26 0 24 0 0 0 chr2 140336192 140336216 -110351638 + AT_rich Low_complexity Low_complexity 1 24 0 252 395 193 0 chr2 140336574 140336688 -110351166 - MER91A DNA MER1_type -56 140 5 28 29 0 0 chr2 140336781 140336816 -110351038 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr2 140336825 140336850 -110351004 + AT_rich Low_complexity Low_complexity 1 25 0 11744 220 28 18 chr2 140337559 140342663 -110345191 - L1PA15-16 LINE L1 -2349 4500 13 24 32 0 0 chr2 140342874 140342905 -110344949 + AT_rich Low_complexity Low_complexity 1 31 0 9509 101 10 5 chr2 140342906 140345085 -110342769 - L1PA8 LINE L1 -9 6163 3971 18602 124 2 21 chr2 140345086 140348179 -110339675 + L1PA8 LINE L1 922 3955 -2191 583 263 58 12 chr2 140348179 140348350 -110339504 + MER58A DNA MER1_type 46 224 0 1382 229 8 0 chr2 140348451 140348713 -110339141 + Tigger7 DNA MER2_type 1 264 -2223 614 167 10 0 chr2 140348711 140348813 -110339041 + Tigger7 DNA MER2_type 2385 2487 0 * 21 0 0 0 chr2 140349293 140349314 -110338540 + AT_rich Low_complexity Low_complexity 1 21 0 216 268 9 18 chr2 140349332 140349444 -110338410 + (TA)n Simple_repeat Simple_repeat 1 111 0 426 254 95 18 chr2 140349623 140349792 -110338062 - MIR SINE MIR 0 262 81 435 300 97 5 chr2 140349866 140350254 -110337600 - L1ME LINE L1 -384 5780 5354 1414 200 3 63 chr2 140350504 140350804 -110337050 + AluJb SINE Alu 1 282 -30 26 30 0 0 chr2 140350804 140350837 -110337017 + AT_rich Low_complexity Low_complexity 1 33 0 1977 125 3 29 chr2 140350924 140351235 -110336619 + AluSx SINE Alu 1 303 -9 935 231 45 67 chr2 140351332 140351644 -110336210 + MLT1A1 LTR MaLR 19 323 -42 390 304 155 38 chr2 140351647 140351989 -110335865 - L1ME LINE L1 -1387 4759 4378 192 77 0 0 chr2 140353453 140353479 -110334375 + (A)n Simple_repeat Simple_repeat 1 26 0 2417 87 0 0 chr2 140355185 140355484 -110332370 - AluY SINE Alu -12 299 1 424 276 90 6 chr2 140355488 140355644 -110332210 + L2 LINE L2 1541 1709 -1605 721 169 0 16 chr2 140355650 140355769 -110332085 + FLAM_C SINE Alu 1 118 -21 306 50 0 0 chr2 140355769 140355809 -110332045 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1729 285 151 24 chr2 140355821 140356390 -110331464 + L2 LINE L2 1719 2435 -879 2285 101 7 0 chr2 140356390 140356687 -110331167 - AluSg SINE Alu -11 299 1 1729 285 151 24 chr2 140356687 140356980 -110330874 + L2 LINE L2 2435 2690 -624 481 303 12 31 chr2 140356981 140357143 -110330711 - LTR16A LTR ERVL -59 391 233 1259 127 38 25 chr2 140357149 140357385 -110330469 + AluSp SINE Alu 56 294 -19 2271 126 14 6 chr2 140357550 140357915 -110329939 + L1PA14 LINE L1 5793 6160 -1 706 243 90 18 chr2 140358007 140358325 -110329529 - L1M LINE L1 -747 5399 5084 2044 182 53 0 chr2 140358327 140358701 -110329153 + L1MC1 LINE L1 35 428 -5998 2719 226 68 48 chr2 140358703 140359439 -110328415 + MLT1A1-int LTR MaLR 280 1030 -705 1319 248 21 16 chr2 140359407 140359826 -110328028 + MLT1A1-int LTR MaLR 1238 1651 0 * 1301 230 24 38 chr2 140359826 140360195 -110327659 + MLT1A1 LTR MaLR 1 364 -1 5215 237 109 22 chr2 140360199 140361570 -110326284 + L1MC1 LINE L1 3789 5039 -1574 3379 185 29 5 chr2 140361570 140362231 -110325623 + L1PA16 LINE L1 5488 6164 -2 5215 237 109 22 chr2 140362231 140362411 -110325443 + L1MC1 LINE L1 5039 5202 -1411 186 71 0 0 chr2 140362411 140362439 -110325415 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 5215 237 109 22 chr2 140362439 140363450 -110324404 + L1MC1 LINE L1 5202 6613 0 361 191 24 143 chr2 140363449 140363617 -110324237 - L1ME3 LINE L1 -109 6055 5908 * 1621 255 67 58 chr2 140363624 140364820 -110323034 - L1MEc LINE L1 -1053 5487 1713 182 114 0 29 chr2 140364824 140364859 -110322995 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 369 62 0 0 chr2 140365094 140365142 -110322712 + (TG)n Simple_repeat Simple_repeat 2 49 0 579 247 67 6 chr2 140365305 140365483 -110322371 - L1MEc LINE L1 -5919 611 423 208 303 13 0 chr2 140366529 140366605 -110321249 + (TTCA)n Simple_repeat Simple_repeat 2 78 0 261 324 28 42 chr2 140367059 140367201 -110320653 - LTR16A LTR ERVL -259 191 52 7410 209 39 7 chr2 140367360 140368840 -110319014 - MSTA-int LTR MaLR -123 1528 1 2118 189 36 0 chr2 140368840 140369253 -110318601 - MSTA LTR MaLR 0 428 1 282 258 15 0 chr2 140369423 140369489 -110318365 - MER83A-int LTR ERV1 -37 7719 7653 387 346 55 32 chr2 140369615 140370049 -110317805 - MER83A-int LTR ERV1 -253 6423 5980 375 312 38 45 chr2 140370610 140370902 -110316952 - MER83A-int LTR ERV1 -2135 4987 4698 326 318 90 50 chr2 140371537 140371961 -110315893 - MER83A-int LTR ERV1 -2478 4613 4173 314 170 0 0 chr2 140372555 140372608 -110315246 - MER83A-int LTR ERV1 -3839 2837 2785 839 204 90 53 chr2 140373575 140374066 -110313788 - MER83A-int LTR ERV1 -2528 4148 1720 1469 177 43 20 chr2 140374878 140375177 -110312677 + AluJb SINE Alu 1 306 -6 4128 163 55 60 chr2 140375474 140376296 -110311558 - MER83A-int LTR ERV1 -6418 1702 885 231 103 0 0 chr2 140376296 140376335 -110311519 + (CA)n Simple_repeat Simple_repeat 2 40 0 4128 163 55 60 chr2 140376335 140376542 -110311312 - MER83A-int LTR ERV1 -7235 885 678 1306 130 4 57 chr2 140376516 140376762 -110311092 - MER83A-int LTR ERV1 -2344 1941 1709 * 25 31 0 0 chr2 140377490 140377522 -110310332 + AT_rich Low_complexity Low_complexity 1 32 0 409 336 60 8 chr2 140377536 140377771 -110310083 - MER41B LTR ERV1 -205 430 184 5497 72 5 35 chr2 140378805 140379267 -110308587 + MER4E LTR ERV1 1 431 -335 2095 112 3 7 chr2 140379267 140379562 -110308292 - AluSg SINE Alu -16 294 1 5497 72 5 35 chr2 140379562 140379889 -110307965 + MER4E LTR ERV1 431 766 0 205 359 0 0 chr2 140380302 140380380 -110307474 - L3b LINE CR1 -208 1375 1298 2229 105 0 3 chr2 140381275 140381569 -110306285 + AluSq SINE Alu 1 293 -20 210 37 0 0 chr2 140382249 140382276 -110305578 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 307 242 55 0 chr2 140382289 140382380 -110305474 + L1MEc LINE L1 120 215 -6181 451 268 92 14 chr2 140382421 140382563 -110305291 + MIR SINE MIR 109 261 -1 399 197 71 16 chr2 140382622 140382749 -110305105 - LTR54B LTR ERV1 0 498 365 * 759 200 160 22 chr2 140382748 140382973 -110304881 - LTR54B LTR ERV1 -242 256 1 21 71 0 0 chr2 140382979 140383021 -110304833 + AT_rich Low_complexity Low_complexity 1 42 0 300 214 0 117 chr2 140383741 140383844 -110304010 + L1MC4 LINE L1 6614 6704 -1338 317 271 0 31 chr2 140383862 140383958 -110303896 + L1MC4 LINE L1 6611 6703 -1339 2102 117 10 7 chr2 140383959 140384258 -110303596 - AluSx SINE Alu -12 300 1 382 354 51 22 chr2 140384404 140384582 -110303272 + MIR3 SINE MIR 20 202 -6 1660 197 101 17 chr2 140385715 140385948 -110301906 - MER50 LTR ERV1 0 734 522 1875 48 0 26 chr2 140385948 140386179 -110301675 - AluY SINE Alu -10 301 77 1660 197 101 17 chr2 140386179 140386362 -110301492 - MER50 LTR ERV1 -212 522 283 1535 172 4 11 chr2 140386472 140386739 -110301115 - AluSx SINE Alu -41 271 7 714 234 19 7 chr2 140386825 140386979 -110300875 - MER50 LTR ERV1 -568 166 11 1537 183 7 18 chr2 140387373 140387658 -110300196 - AluJb SINE Alu -30 282 1 791 152 15 23 chr2 140387883 140388015 -110299839 + FLAM_C SINE Alu 1 131 -2 292 247 11 0 chr2 140388103 140388192 -110299662 - LTR37A LTR ERV1 -55 371 282 1871 168 89 13 chr2 140388330 140388723 -110299131 + LTR29 LTR ERV1 160 582 -40 24 0 0 0 chr2 140389116 140389140 -110298714 + AT_rich Low_complexity Low_complexity 1 24 0 1487 221 52 0 chr2 140389196 140389577 -110298277 - L1MA9 LINE L1 -38 6274 5874 426 316 17 35 chr2 140390819 140390993 -110296861 - MIR3 SINE MIR 0 208 38 1802 120 71 7 chr2 140392381 140392664 -110295190 - AluSx SINE Alu 0 312 12 361 343 34 62 chr2 140392812 140393104 -110294750 + L2 LINE L2 2918 3201 -112 379 282 257 0 chr2 140393615 140393821 -110294033 - MLT1J LTR MaLR -15 496 238 312 259 42 70 chr2 140394021 140394164 -110293690 - L2 LINE L2 -44 3269 3131 2552 91 36 3 chr2 140395240 140395601 -110292253 + THE1C LTR MaLR 1 373 -2 180 308 19 0 chr2 140395739 140395791 -110292063 + MIR SINE MIR 84 136 -126 208 341 86 35 chr2 140396367 140396681 -110291173 + L2 LINE L2 1802 2131 -1183 233 289 221 0 chr2 140397868 140397972 -110289882 + L2 LINE L2 3179 3305 -8 254 308 41 50 chr2 140398981 140399165 -110288689 + L2 LINE L2 2771 2959 -313 418 234 139 7 chr2 140399324 140399461 -110288393 + MIR SINE MIR 57 211 -51 399 41 0 0 chr2 140401211 140401260 -110286594 + (CA)n Simple_repeat Simple_repeat 1 49 0 409 300 108 89 chr2 140401299 140401769 -110286085 - MLT1K LTR MaLR -108 480 2 245 273 109 73 chr2 140401853 140401963 -110285891 - MIR3 SINE MIR -81 127 14 1848 143 58 30 chr2 140401982 140402345 -110285509 - THE1C LTR MaLR -2 373 1 22 70 0 0 chr2 140403721 140403764 -110284090 + AT_rich Low_complexity Low_complexity 1 43 0 421 317 25 30 chr2 140403796 140403998 -110283856 + L1ME4a LINE L1 5634 5834 -287 433 276 144 45 chr2 140406142 140406406 -110281448 + MLT1I LTR MaLR 101 390 -19 228 241 15 98 chr2 140406922 140407055 -110280799 - MIR SINE MIR -21 241 120 198 71 0 0 chr2 140408811 140408839 -110279015 + (T)n Simple_repeat Simple_repeat 1 28 0 263 49 24 0 chr2 140408859 140408900 -110278954 + (TTTTA)n Simple_repeat Simple_repeat 4 45 0 1348 17 17 39 chr2 140408900 140409079 -110278775 - L1PA3 LINE L1 -13 6142 5968 732 295 40 16 chr2 140409135 140409457 -110278397 - L1M4 LINE L1 -1821 4325 3996 240 206 191 0 chr2 140410005 140410068 -110277786 + MLT1I LTR MaLR 94 168 -241 3864 102 19 5 chr2 140410295 140410874 -110276980 - L1PA10 LINE L1 -5 6163 5577 635 140 10 0 chr2 140410874 140410974 -110276880 - AluSq/x SINE Alu -172 140 40 532 338 54 5 chr2 140411155 140411377 -110276477 - MIR SINE MIR -10 252 20 33 25 0 0 chr2 140411377 140411417 -110276437 + AT_rich Low_complexity Low_complexity 1 40 0 7494 122 15 0 chr2 140411417 140412813 -110275041 + L1P4 LINE L1 4163 5579 -589 1401 143 0 0 chr2 140412851 140413054 -110274800 - AluSx SINE Alu -105 207 5 252 295 9 9 chr2 140413256 140413368 -110274486 + HAL1b LINE L1 1002 1113 -235 2120 129 7 0 chr2 140413680 140413990 -110273864 - AluSq SINE Alu -1 312 1 847 210 21 153 chr2 140414359 140414836 -110273018 - L1M4 LINE L1 -1198 4948 4535 1367 153 5 18 chr2 140414836 140415059 -110272795 - AluJb SINE Alu -8 304 85 4869 251 60 40 chr2 140415059 140415338 -110272516 - L1M4 LINE L1 -1602 4544 4272 2671 39 0 0 chr2 140415338 140415645 -110272209 - AluY SINE Alu -4 307 1 4869 251 60 40 chr2 140415645 140416831 -110271023 - L1M4 LINE L1 -1874 4272 3024 192 77 0 0 chr2 140416831 140416857 -110270997 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 4869 251 60 40 chr2 140416857 140417450 -110270404 - L1M4 LINE L1 -3122 3024 2444 271 325 137 8 chr2 140417452 140417569 -110270285 - L1MDa LINE L1 -5761 779 648 2012 124 0 7 chr2 140418033 140418342 -110269512 - AluSx SINE Alu 0 307 1 642 294 46 67 chr2 140418354 140418545 -110269309 + HAL1b LINE L1 100 293 -1055 1952 139 13 13 chr2 140418545 140418855 -110268999 + AluSx SINE Alu 1 310 -2 642 294 46 67 chr2 140418855 140419159 -110268695 + HAL1b LINE L1 293 585 -763 239 311 0 0 chr2 140419160 140419221 -110268633 - L2 LINE L2 -1 3271 3211 303 362 0 17 chr2 140419225 140419341 -110268513 + HAL1b LINE L1 590 703 -645 246 304 0 0 chr2 140419408 140419487 -110268367 + (TA)n Simple_repeat Simple_repeat 2 80 0 279 0 0 0 chr2 140419492 140419523 -110268331 + (TG)n Simple_repeat Simple_repeat 2 32 0 220 363 55 11 chr2 140419524 140419615 -110268239 - MIR SINE MIR -165 97 3 358 241 57 32 chr2 140419665 140419823 -110268031 + HAL1b LINE L1 763 924 -424 1034 208 134 0 chr2 140419823 140420039 -110267815 + AluJb SINE Alu 40 284 -28 2451 39 0 0 chr2 140420568 140420848 -110267006 + AluY SINE Alu 1 280 -31 228 301 36 24 chr2 140420914 140420997 -110266857 + L2 LINE L2 2555 2638 -676 204 298 96 21 chr2 140421198 140421292 -110266562 + L2 LINE L2 3134 3234 -38 21 57 0 0 chr2 140421590 140421625 -110266229 + AT_rich Low_complexity Low_complexity 1 35 0 1706 180 28 0 chr2 140423197 140423486 -110264368 + AluSx SINE Alu 1 297 -15 277 340 91 14 chr2 140424158 140424367 -110263487 + L3b LINE CR1 1133 1357 -226 370 85 0 8 chr2 140427911 140427969 -110259885 - MLT2A2 LTR ERVL 0 453 405 374 215 31 0 chr2 140427970 140428100 -110259754 + (TA)n Simple_repeat Simple_repeat 2 135 0 3160 79 15 0 chr2 140428100 140428507 -110259347 - MLT2A2 LTR ERVL -40 413 1 252 189 0 44 chr2 140428937 140429023 -110258831 - MER21A LTR ERV1 -396 535 390 198 143 0 0 chr2 140429237 140429272 -110258582 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 874 257 71 16 chr2 140430058 140430489 -110257365 + LTR33 LTR ERVL 3 493 -28 238 348 27 53 chr2 140430622 140430736 -110257118 + L2 LINE L2 2877 2986 -286 2303 189 19 2 chr2 140430736 140431155 -110256699 - MSTB LTR MaLR 0 426 1 238 348 27 53 chr2 140431155 140431227 -110256627 + L2 LINE L2 2986 3058 -214 200 204 0 41 chr2 140431286 140431335 -110256519 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 290 344 8 38 chr2 140431336 140431467 -110256387 - L2 LINE L2 -5 3308 3182 * 669 268 79 38 chr2 140431449 140431801 -110256053 - L2 LINE L2 -274 2998 2627 304 322 141 20 chr2 140431910 140432059 -110255795 + MIR SINE MIR 20 186 -76 326 345 96 43 chr2 140433173 140433547 -110254307 + L1MC5 LINE L1 5547 5940 -1868 189 172 0 0 chr2 140433613 140433642 -110254212 + L3 LINE CR1 172 200 -1377 269 245 38 19 chr2 140434517 140434623 -110253231 + L1M4 LINE L1 3879 3986 -2160 335 355 89 9 chr2 140434875 140435089 -110252765 + MIR SINE MIR 20 250 -12 361 333 22 7 chr2 140436050 140436188 -110251666 + MIR SINE MIR 86 225 -37 216 0 0 0 chr2 140436377 140436401 -110251453 + (CA)n Simple_repeat Simple_repeat 2 25 0 291 183 21 11 chr2 140436402 140436495 -110251359 + (TA)n Simple_repeat Simple_repeat 1 94 0 1633 163 7 0 chr2 140436727 140437021 -110250833 + L1MB1 LINE L1 5872 6167 -1 414 0 0 0 chr2 140437144 140437190 -110250664 + (TG)n Simple_repeat Simple_repeat 2 47 0 341 173 0 64 chr2 140437232 140437405 -110250449 + (TA)n Simple_repeat Simple_repeat 1 162 0 403 185 16 43 chr2 140437418 140437602 -110250252 + (TA)n Simple_repeat Simple_repeat 2 180 0 228 170 43 0 chr2 140437604 140437651 -110250203 + MLT2D LTR ERVL 366 414 0 400 138 17 44 chr2 140437810 140437991 -110249863 + (TA)n Simple_repeat Simple_repeat 1 176 0 1658 186 58 27 chr2 140437991 140438363 -110249491 - MLT2D LTR ERVL -19 535 1 1884 132 32 0 chr2 140439252 140439532 -110248322 + AluSx SINE Alu 4 292 -20 1121 242 106 84 chr2 140440899 140441825 -110246029 + L1MC5 LINE L1 6501 7386 -575 270 337 93 48 chr2 140442334 140442922 -110244932 - L2 LINE L2 -1064 2250 1636 290 253 77 22 chr2 140443130 140443221 -110244633 - MIR SINE MIR -119 143 48 23 0 0 0 chr2 140444056 140444079 -110243775 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 140445258 140445281 -110242573 + AT_rich Low_complexity Low_complexity 1 23 0 242 326 53 0 chr2 140445300 140445432 -110242422 + MIR SINE MIR 93 231 -31 21 0 0 0 chr2 140446411 140446432 -110241422 + AT_rich Low_complexity Low_complexity 1 21 0 6143 71 24 1 chr2 140447232 140448106 -110239748 + L1PA5 LINE L1 5257 6150 -4 252 59 0 0 chr2 140448176 140448210 -110239644 + (TG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr2 140448214 140448235 -110239619 + AT_rich Low_complexity Low_complexity 1 21 0 715 310 119 29 chr2 140448620 140449100 -110238754 + L1MEd LINE L1 318 840 -5279 237 333 78 26 chr2 140449958 140450384 -110237470 - L1ME4a LINE L1 -129 5992 5545 24 32 0 0 chr2 140450778 140450809 -110237045 + AT_rich Low_complexity Low_complexity 1 31 0 338 299 72 2 chr2 140450896 140451066 -110236788 - MIR SINE MIR -10 252 33 1765 175 101 28 chr2 140451708 140452143 -110235711 + MLT1C LTR MaLR 1 467 0 21 0 0 0 chr2 140452653 140452674 -110235180 + AT_rich Low_complexity Low_complexity 1 21 0 1684 134 86 4 chr2 140453001 140453270 -110234584 + AluSg SINE Alu 5 295 -15 213 347 67 33 chr2 140454536 140454686 -110233168 + L2 LINE L2 2583 2737 -577 1541 93 5 5 chr2 140455474 140455690 -110232164 - THE1B LTR MaLR -148 216 1 2140 72 4 0 chr2 140455690 140455969 -110231885 - THE1B-int LTR MaLR 0 1580 1301 482 331 53 35 chr2 140456718 140456981 -110230873 - LTR16C LTR ERVL 0 491 219 2032 152 126 5 chr2 140456981 140457363 -110230491 - MSTA LTR MaLR 0 428 1 482 331 53 35 chr2 140457363 140457437 -110230417 - LTR16C LTR ERVL -272 219 148 329 75 19 0 chr2 140458357 140458410 -110229444 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 226 372 35 0 chr2 140458511 140458597 -110229257 - MIR SINE MIR -167 95 7 566 352 14 18 chr2 140458730 140458949 -110228905 - MIR SINE MIR -43 219 2 367 305 55 39 chr2 140459572 140459700 -110228154 - L2 LINE L2 -9 3263 3134 2644 82 114 10 chr2 140459959 140460361 -110227493 - MLT2A1 LTR ERVL 0 444 1 43825 77 6 6 chr2 140460363 140463749 -110224105 - HERVL-A1 LTR ERVL -2 5652 2262 2221 108 0 13 chr2 140463749 140464064 -110223790 - AluY SINE Alu 0 311 1 43825 77 6 6 chr2 140464064 140466327 -110221527 - HERVL-A1 LTR ERVL -3392 2262 1 2566 109 82 10 chr2 140466327 140466369 -110221485 - MLT2A1 LTR ERVL 0 444 406 186 43 0 0 chr2 140466369 140466392 -110221462 + (CA)n Simple_repeat Simple_repeat 2 24 0 2566 109 82 10 chr2 140466392 140466763 -110221091 - MLT2A1 LTR ERVL -38 406 1 24 0 0 0 chr2 140466921 140466945 -110220909 + AT_rich Low_complexity Low_complexity 1 24 0 677 204 208 4 chr2 140467479 140467705 -110220149 - MER33 DNA MER1_type -46 278 7 244 274 151 9 chr2 140468053 140468159 -110219695 - L2 LINE L2 -1 3271 3151 23 33 0 0 chr2 140469118 140469148 -110218706 + AT_rich Low_complexity Low_complexity 1 30 0 289 316 203 0 chr2 140469476 140469634 -110218220 - L3 LINE CR1 -1154 423 234 180 235 0 0 chr2 140471417 140471451 -110216403 + L2 LINE L2 3239 3272 0 25 31 0 0 chr2 140471862 140471894 -110215960 + AT_rich Low_complexity Low_complexity 1 32 0 231 278 0 0 chr2 140472459 140472513 -110215341 + L2 LINE L2 3256 3309 -4 507 150 0 0 chr2 140472571 140472651 -110215203 + MADE1 DNA Mariner 1 80 0 7935 13 0 0 chr2 140473659 140474949 -110212905 + L1PA3 LINE L1 4873 6155 0 22 56 0 0 chr2 140475517 140475553 -110212301 + AT_rich Low_complexity Low_complexity 1 36 0 286 321 55 18 chr2 140476072 140476181 -110211673 - MIR SINE MIR -108 154 42 711 241 44 20 chr2 140476208 140476411 -110211443 - MER3 DNA MER1_type 0 209 2 271 351 37 22 chr2 140476421 140476555 -110211299 - MIR SINE MIR -57 151 16 354 74 0 0 chr2 140476586 140476640 -110211214 + (TC)n Simple_repeat Simple_repeat 2 55 0 351 0 0 0 chr2 140476640 140476679 -110211175 + (CA)n Simple_repeat Simple_repeat 1 39 0 432 242 90 71 chr2 140477002 140477370 -110210484 - L1MD3 LINE L1 -1 8037 7680 209 308 19 0 chr2 140479112 140479164 -110208690 - MIR3 SINE MIR -14 194 142 211 299 26 53 chr2 140479281 140479395 -110208459 - MIR SINE MIR -55 153 43 757 317 184 30 chr2 140482280 140483496 -110204358 - L2 LINE L2 0 3313 1897 1713 128 20 3 chr2 140483631 140483928 -110203926 + L1MA3 LINE L1 6004 6305 0 306 368 57 30 chr2 140484872 140485090 -110202764 + L2 LINE L2 3046 3272 0 6447 159 33 12 chr2 140485640 140487278 -110200576 + L1MA8 LINE L1 4063 5761 -530 1613 208 94 5 chr2 140487278 140487672 -110200182 - MSTB1 LTR MaLR 0 432 4 6447 159 33 12 chr2 140487672 140488215 -110199639 + L1MA8 LINE L1 5761 6291 0 2358 93 3 0 chr2 140489065 140489366 -110198488 + AluSg SINE Alu 3 304 -6 23 0 0 0 chr2 140489868 140489891 -110197963 + AT_rich Low_complexity Low_complexity 1 23 0 549 0 0 0 chr2 140490132 140490193 -110197661 + (TA)n Simple_repeat Simple_repeat 2 62 0 2050 110 3 0 chr2 140491056 140491338 -110196516 + AluSc SINE Alu 1 283 -26 226 241 0 0 chr2 140491338 140491392 -110196462 + GA-rich Low_complexity Low_complexity 1 54 0 22 35 0 0 chr2 140491876 140491905 -110195949 + AT_rich Low_complexity Low_complexity 1 29 0 208 359 165 0 chr2 140492528 140492631 -110195223 + L2 LINE L2 3144 3263 -9 487 302 50 54 chr2 140492956 140493178 -110194676 + MIR SINE MIR 3 223 -39 190 228 193 0 chr2 140494894 140494951 -110192903 - L2 LINE L2 0 3313 3246 204 135 0 0 chr2 140495175 140495212 -110192642 + (GA)n Simple_repeat Simple_repeat 2 38 0 1153 49 0 0 chr2 140495430 140495574 -110192280 + AluY SINE Alu 162 305 -6 245 224 0 45 chr2 140496646 140496713 -110191141 + (TAAA)n Simple_repeat Simple_repeat 3 66 0 230 75 50 0 chr2 140497048 140497088 -110190766 + T-rich Low_complexity Low_complexity 2 43 0 180 0 0 0 chr2 140498808 140498828 -110189026 + (T)n Simple_repeat Simple_repeat 1 20 0 917 147 20 7 chr2 140500428 140500578 -110187276 + MLT1B LTR MaLR 1 152 -238 621 138 0 9 chr2 140500607 140500716 -110187138 - AluSx SINE Alu -1 309 202 929 115 0 0 chr2 140500719 140500841 -110187013 - AluSx SINE Alu -191 122 1 1899 145 16 10 chr2 140500849 140501159 -110186695 - AluSx SINE Alu 0 312 1 1167 205 25 29 chr2 140501160 140501404 -110186450 + MLT1B LTR MaLR 148 390 0 325 325 16 57 chr2 140501796 140501890 -110185964 + L2 LINE L2 3152 3241 -31 2202 111 3 0 chr2 140501890 140502197 -110185657 + AluSp SINE Alu 1 308 -5 325 325 16 57 chr2 140502197 140502225 -110185629 + L2 LINE L2 3241 3269 -3 200 240 0 20 chr2 140502705 140502755 -110185099 + (TATG)n Simple_repeat Simple_repeat 1 49 0 766 225 100 5 chr2 140503025 140503225 -110184629 - MER20 DNA MER1_type 0 219 1 351 0 0 0 chr2 140503286 140503325 -110184529 + (CA)n Simple_repeat Simple_repeat 2 40 0 475 249 142 72 chr2 140503327 140503673 -110184181 - MLT1J1 LTR MaLR -52 394 25 * 595 0 14 14 chr2 140503667 140503741 -110184113 + MADE1 DNA Mariner 6 79 -1 28 0 0 0 chr2 140503768 140503796 -110184058 + AT_rich Low_complexity Low_complexity 1 28 0 339 274 0 79 chr2 140505859 140506023 -110181831 + MIR SINE MIR 102 252 -10 510 274 76 38 chr2 140508153 140508390 -110179464 - MLT1L LTR MaLR -6 609 364 728 50 10 0 chr2 140509302 140509403 -110178451 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 1188 214 67 67 chr2 140510333 140510351 -110177503 + L1ME1 LINE L1 5598 5615 -551 1656 201 33 25 chr2 140510351 140510719 -110177135 - MLT1A2 LTR MaLR 0 374 4 1188 214 67 67 chr2 140510719 140511087 -110176767 + L1ME1 LINE L1 5614 5984 -182 371 300 53 65 chr2 140511766 140512005 -110175849 + MIR SINE MIR 27 262 0 498 272 64 38 chr2 140512082 140512403 -110175451 - MLT1H LTR MaLR -15 534 175 299 329 0 0 chr2 140513453 140513569 -110174285 - MLT1J LTR MaLR -276 200 69 268 286 33 22 chr2 140513848 140513939 -110173915 - MER5A DNA MER1_type -1 188 97 180 0 0 0 chr2 140514034 140514054 -110173800 + (T)n Simple_repeat Simple_repeat 1 20 0 544 200 16 8 chr2 140514054 140514179 -110173675 - L1MB1 LINE L1 -264 5904 5779 * 1058 147 6 17 chr2 140514178 140514355 -110173499 + L1MB1 LINE L1 5595 5769 -399 740 77 0 60 chr2 140514359 140514476 -110173378 - L1PA8 LINE L1 -2 6170 6061 1093 201 12 4 chr2 140515193 140515437 -110172417 - L1MA6 LINE L1 0 6300 6055 1419 186 14 4 chr2 140515462 140515737 -110172117 + L1MA6 LINE L1 5779 6056 -244 231 365 82 19 chr2 140515880 140516039 -110171815 + L2 LINE L2 2606 2774 -540 459 0 0 0 chr2 140516823 140516874 -110170980 + (TG)n Simple_repeat Simple_repeat 2 52 0 568 239 78 74 chr2 140516925 140517124 -110170730 - MIR SINE MIR 0 262 60 1718 175 23 37 chr2 140517124 140517472 -110170382 + MER2 DNA MER2_type 2 344 0 568 239 78 74 chr2 140517472 140517502 -110170352 - MIR SINE MIR -202 60 32 296 302 121 51 chr2 140517524 140517739 -110170115 - MIR SINE MIR -26 236 7 220 324 0 0 chr2 140518041 140518112 -110169742 + GA-rich Low_complexity Low_complexity 3 73 0 484 291 40 7 chr2 140518305 140518453 -110169401 - MIR SINE MIR -90 172 20 226 273 0 25 chr2 140519995 140520116 -110167738 + (TATATG)n Simple_repeat Simple_repeat 2 119 0 5178 115 9 3 chr2 140521827 140522611 -110165243 - L1PA13 LINE L1 -1 6162 5374 3747 213 73 43 chr2 140522612 140523896 -110163958 + L1MDa LINE L1 1009 2331 -4209 1302 222 95 133 chr2 140523896 140524391 -110163463 + MLT2B3 LTR ERVL 1 476 -78 300 238 30 30 chr2 140525498 140525662 -110162192 + (TA)n Simple_repeat Simple_repeat 1 164 0 909 314 63 28 chr2 140525793 140526750 -110161104 - L1M4 LINE L1 -1083 5063 4074 26 0 0 0 chr2 140526994 140527020 -110160834 + AT_rich Low_complexity Low_complexity 1 26 0 922 230 153 43 chr2 140527230 140527556 -110160298 - MLT1A1 LTR MaLR -3 362 1 236 302 0 0 chr2 140527623 140527686 -110160168 - L1MC/D LINE L1 -2212 5596 5534 1484 218 3 22 chr2 140527867 140528184 -110159670 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 140528506 140528527 -110159327 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 140528749 140528777 -110159077 + AT_rich Low_complexity Low_complexity 1 28 0 2103 101 10 7 chr2 140529080 140529378 -110158476 - AluSc SINE Alu -10 299 1 2379 42 0 3 chr2 140530642 140530966 -110156888 + AluY SINE Alu 2 324 0 2079 260 0 4 chr2 140532881 140533354 -110154500 + MER70A LTR ERVL 1 471 -1 523 273 84 75 chr2 140534179 140534256 -110153598 + L2 LINE L2 2989 3064 -249 1063 228 148 86 chr2 140534256 140534870 -110152984 - MLT1E1 LTR MaLR -2 652 1 523 273 84 75 chr2 140534870 140535007 -110152847 + L2 LINE L2 3064 3209 -104 1977 141 7 3 chr2 140535007 140535305 -110152549 - AluSq SINE Alu -14 299 1 523 273 84 75 chr2 140535305 140535411 -110152443 + L2 LINE L2 3209 3313 0 356 359 71 0 chr2 140536213 140536397 -110151457 + MIR SINE MIR 47 243 -19 232 149 27 101 chr2 140537095 140537283 -110150571 + (TTATA)n Simple_repeat Simple_repeat 5 178 0 387 322 73 28 chr2 140537814 140537991 -110149863 + L1ME2 LINE L1 1020 1204 -4915 201 182 0 0 chr2 140538355 140538388 -110149466 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 347 303 134 11 chr2 140538635 140539091 -110148763 + L1ME2 LINE L1 2184 2695 -3434 402 179 54 12 chr2 140539171 140539339 -110148515 + (CATATA)n Simple_repeat Simple_repeat 2 176 0 703 315 75 33 chr2 140539443 140540066 -110147788 + L1ME2 LINE L1 4264 4918 -1211 2221 213 33 21 chr2 140540066 140540121 -110147733 - MLT2B1 LTR ERVL 0 520 467 252 0 0 0 chr2 140540121 140540149 -110147705 + (GA)n Simple_repeat Simple_repeat 1 28 0 2221 213 33 21 chr2 140540149 140540606 -110147248 - MLT2B1 LTR ERVL -53 467 2 703 315 75 33 chr2 140540606 140540652 -110147202 + L1ME2 LINE L1 4918 4961 -1168 2633 225 12 2 chr2 140540659 140541251 -110146603 - L1PA16 LINE L1 -1554 4592 3995 * 4865 162 38 36 chr2 140541247 140541982 -110145872 + L1PA16 LINE L1 4597 5329 -837 1745 150 30 0 chr2 140541982 140542248 -110145606 + AluSp SINE Alu 3 276 -37 4865 162 38 36 chr2 140542248 140543048 -110144806 + L1PA16 LINE L1 5329 6157 -9 454 286 128 29 chr2 140543112 140543665 -110144189 + L1ME2 LINE L1 4998 5612 -535 323 292 173 25 chr2 140543864 140544107 -110143747 + L1ME2 LINE L1 5664 5942 -205 396 149 0 15 chr2 140544130 140544197 -110143657 + MLT1C LTR MaLR 1 66 -401 21 57 0 0 chr2 140544397 140544432 -110143422 + AT_rich Low_complexity Low_complexity 1 35 0 370 292 50 0 chr2 140544585 140544705 -110143149 + MIR SINE MIR 132 257 -5 619 318 20 20 chr2 140544884 140545129 -110142725 - L1MC4 LINE L1 -1091 6951 6707 22 0 0 0 chr2 140545489 140545511 -110142343 + AT_rich Low_complexity Low_complexity 1 22 0 662 256 87 0 chr2 140545599 140545841 -110142013 + L1ME2 LINE L1 5655 5917 -247 3404 159 92 8 chr2 140545841 140546450 -110141404 + MER50 LTR ERV1 1 660 -74 1588 140 0 0 chr2 140546450 140546678 -110141176 - LTR8 LTR ERV1 0 691 464 7497 152 40 16 chr2 140546678 140548003 -110139851 - Tigger1 DNA MER2_type -1060 1358 2 328 285 121 17 chr2 140548096 140548584 -110139270 - L1M4 LINE L1 -1432 4714 4175 876 195 51 33 chr2 140548637 140548852 -110139002 + MER20 DNA MER1_type 1 219 0 235 235 0 0 chr2 140549223 140549274 -110138580 + (TATG)n Simple_repeat Simple_repeat 3 53 0 1778 156 23 10 chr2 140549450 140549757 -110138097 - AluJo SINE Alu 0 312 2 1056 262 121 28 chr2 140551601 140552096 -110135758 - MLT1F1 LTR MaLR -12 555 11 280 297 201 0 chr2 140553178 140553362 -110134492 - MIR SINE MIR -31 231 5 542 371 65 0 chr2 140553366 140553598 -110134256 + MIR SINE MIR 2 248 -14 572 311 27 32 chr2 140553615 140553834 -110134020 - MIR SINE MIR -39 223 6 206 197 169 70 chr2 140553924 140553995 -110133859 - MIR SINE MIR -66 196 119 191 294 235 0 chr2 140554561 140554629 -110133225 + L2 LINE L2 3206 3289 -24 205 140 0 40 chr2 140554641 140554691 -110133163 + (TTAA)n Simple_repeat Simple_repeat 3 50 0 287 279 0 0 chr2 140554873 140554941 -110132913 + MIR SINE MIR 74 141 -121 33 0 0 0 chr2 140554941 140554974 -110132880 + AT_rich Low_complexity Low_complexity 1 33 0 2123 114 3 0 chr2 140554984 140555281 -110132573 + AluSp SINE Alu 1 298 -15 527 229 16 8 chr2 140555315 140555437 -110132417 + MIR SINE MIR 134 256 -6 585 174 0 50 chr2 140555625 140555746 -110132108 + MER2 DNA MER2_type 95 209 -136 203 186 47 0 chr2 140556676 140556719 -110131135 - MER5C DNA MER1_type -3 321 277 207 0 0 0 chr2 140556721 140556744 -110131110 + (TG)n Simple_repeat Simple_repeat 1 23 0 562 202 16 16 chr2 140556909 140557033 -110130821 - MER5C DNA MER1_type -200 124 1 28 29 0 0 chr2 140557482 140557517 -110130337 + AT_rich Low_complexity Low_complexity 1 35 0 626 309 80 10 chr2 140557656 140557857 -110129997 - MIR SINE MIR -1 261 47 23 0 0 0 chr2 140558281 140558304 -110129550 + AT_rich Low_complexity Low_complexity 1 23 0 3853 263 31 12 chr2 140558417 140559619 -110128235 - L1M2c LINE L1 -4516 2137 285 22 0 0 0 chr2 140560315 140560337 -110127517 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 140560738 140560761 -110127093 + AT_rich Low_complexity Low_complexity 1 23 0 7033 264 56 30 chr2 140561308 140565692 -110122162 + L1MB1 LINE L1 13 4227 -1743 9911 155 13 1 chr2 140565697 140567406 -110120448 - L1PA8A LINE L1 -2434 3712 1984 11071 105 9 3 chr2 140567411 140569801 -110118053 + L1PA8A LINE L1 3703 6104 -27 226 0 59 0 chr2 140569802 140569836 -110118018 + (TTTTTG)n Simple_repeat Simple_repeat 3 38 0 3604 214 11 64 chr2 140569847 140570746 -110117108 + L1MB1 LINE L1 4222 5064 -906 6130 17 1 0 chr2 140570746 140571451 -110116403 - L1PA2 LINE L1 -2 6153 5448 3604 214 11 64 chr2 140571451 140571554 -110116300 + L1MB1 LINE L1 5064 5171 -799 384 94 0 0 chr2 140571549 140571602 -110116252 + L1MB1 LINE L1 5437 5489 -503 * 1929 24 0 0 chr2 140571601 140571889 -110115965 - L1P2 LINE L1 -664 5491 5204 2011 45 0 0 chr2 140571889 140572126 -110115728 + L1PA3 LINE L1 5908 6152 -3 2348 183 47 2 chr2 140572154 140572646 -110115208 + L1MB1 LINE L1 5476 5989 -3 234 222 0 0 chr2 140572677 140572731 -110115123 + (TA)n Simple_repeat Simple_repeat 2 55 0 269 266 13 0 chr2 140572731 140572810 -110115044 + L1MC1 LINE L1 4299 4378 -1768 34 0 0 0 chr2 140572840 140572874 -110114980 + AT_rich Low_complexity Low_complexity 1 34 0 207 259 0 35 chr2 140573012 140573097 -110114757 + A-rich Low_complexity Low_complexity 2 83 0 21 0 0 0 chr2 140574853 140574874 -110112980 + AT_rich Low_complexity Low_complexity 1 21 0 892 253 86 3 chr2 140576435 140576727 -110111127 - L1MD2 LINE L1 -26 6333 6018 2945 233 51 19 chr2 140576783 140577909 -110109945 - L1MD1 LINE L1 -221 6281 5110 4803 177 25 30 chr2 140577912 140578237 -110109617 + L1MC1 LINE L1 4847 5172 -2613 1790 122 74 4 chr2 140578237 140578508 -110109346 + AluSp SINE Alu 3 292 -21 4803 177 25 30 chr2 140578508 140579638 -110108216 + L1MC1 LINE L1 5172 7783 -2 4502 260 75 35 chr2 140579656 140580290 -110107564 - L1MD1 LINE L1 -1312 5094 4487 180 0 0 0 chr2 140580290 140580310 -110107544 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 4502 260 75 35 chr2 140580310 140581103 -110106751 - L1MD1 LINE L1 -1919 4487 3727 2302 107 0 0 chr2 140581103 140581411 -110106443 - AluSg SINE Alu -2 308 1 4502 260 75 35 chr2 140581411 140581558 -110106296 - L1MD1 LINE L1 -2679 3727 3587 5441 145 16 14 chr2 140581558 140582999 -110104855 - L1PA15 LINE L1 -1 6164 4721 4502 260 75 35 chr2 140582999 140583692 -110104162 - L1MD1 LINE L1 -2819 3587 2716 2095 193 14 12 chr2 140583694 140584118 -110103736 - L1MD1 LINE L1 -5307 1102 678 374 115 0 0 chr2 140584762 140584814 -110103040 - MER66A LTR ERV1 -140 338 287 1340 238 43 7 chr2 140585091 140585394 -110102460 - MER58B DNA MER1_type -27 314 1 7241 206 37 7 chr2 140585609 140587310 -110100544 + L1MA7 LINE L1 2992 4744 -1402 825 171 9 54 chr2 140587327 140587559 -110100295 + AluJb SINE Alu 5 292 -20 3217 189 54 63 chr2 140587565 140589117 -110098737 + L1MA7 LINE L1 4752 6291 0 22 56 0 0 chr2 140591346 140591382 -110096472 + AT_rich Low_complexity Low_complexity 1 36 0 265 335 32 19 chr2 140592965 140593123 -110094731 + MARNA DNA Mariner 65 224 -362 922 100 0 0 chr2 140593126 140593298 -110094556 - AluY SINE Alu 0 334 163 253 256 41 41 chr2 140593346 140593467 -110094387 + MARNA DNA Mariner 261 381 -205 2229 190 20 66 chr2 140593593 140594136 -110093718 + MLT2B1 LTR ERVL 3 520 0 27 73 0 0 chr2 140595051 140595106 -110092748 + AT_rich Low_complexity Low_complexity 1 55 0 220 263 71 20 chr2 140596011 140596110 -110091744 + MIR SINE MIR 81 184 -78 774 243 18 0 chr2 140596328 140596497 -110091357 + MER5B DNA MER1_type 7 178 0 372 229 184 0 chr2 140597877 140597986 -110089868 + MIR SINE MIR 3 131 -131 587 264 134 20 chr2 140597999 140598298 -110089556 + MLT1I LTR MaLR 14 346 -63 261 252 58 65 chr2 140598310 140598449 -110089405 + MIR SINE MIR 125 262 0 22 0 0 0 chr2 140598449 140598471 -110089383 + AT_rich Low_complexity Low_complexity 1 22 0 547 228 38 16 chr2 140598644 140598828 -110089026 + MER53 DNA DNA 1 188 -1 351 323 8 44 chr2 140598971 140599146 -110088708 + MIR SINE MIR 2 161 -57 851 237 61 0 chr2 140599228 140599426 -110088428 - MIR SINE MIR -19 243 34 198 302 119 24 chr2 140599993 140600119 -110087735 + MIR SINE MIR 47 184 -78 236 352 0 14 chr2 140600187 140600258 -110087596 - MIR SINE MIR -77 131 62 271 247 56 0 chr2 140600468 140600557 -110087297 - MER53 DNA DNA -1 188 95 * 295 266 32 0 chr2 140600487 140600581 -110087273 + MER53 DNA DNA 31 127 -62 1544 202 0 26 chr2 140600584 140600896 -110086958 - AluJb SINE Alu -3 309 6 282 56 0 0 chr2 140602029 140602065 -110085789 + (TG)n Simple_repeat Simple_repeat 2 37 0 421 266 35 109 chr2 140602091 140602320 -110085534 - MIR SINE MIR -3 259 48 472 213 0 46 chr2 140602456 140602564 -110085290 + MER58B DNA MER1_type 239 341 0 1202 202 20 10 chr2 140602588 140602880 -110084974 - MER33 DNA MER1_type 0 324 30 21 57 0 0 chr2 140602894 140602929 -110084925 + AT_rich Low_complexity Low_complexity 1 35 0 666 281 8 34 chr2 140603149 140603384 -110084470 + L2 LINE L2 3085 3313 0 225 0 0 0 chr2 140604712 140604737 -110083117 + (TA)n Simple_repeat Simple_repeat 1 25 0 22 0 0 0 chr2 140604784 140604806 -110083048 + AT_rich Low_complexity Low_complexity 1 22 0 186 167 0 104 chr2 140605941 140605989 -110081865 - L2 LINE L2 -9 3304 3262 271 372 51 22 chr2 140606679 140606816 -110081038 + L2 LINE L2 2606 2746 -568 231 305 59 17 chr2 140606839 140606957 -110080897 - L2 LINE L2 0 3313 3191 330 26 0 0 chr2 140607054 140607093 -110080761 + (TG)n Simple_repeat Simple_repeat 2 40 0 725 310 5 5 chr2 140607228 140607431 -110080423 - MIR SINE MIR -21 241 39 305 333 14 35 chr2 140607658 140607799 -110080055 + MIR3 SINE MIR 71 208 0 24 0 0 0 chr2 140608162 140608186 -110079668 + AT_rich Low_complexity Low_complexity 1 24 0 339 306 58 35 chr2 140609050 140609387 -110078467 + L1MC4a LINE L1 5607 5781 -383 308 283 72 22 chr2 140609583 140609721 -110078133 + HAL1b LINE L1 1191 1335 -13 368 256 0 13 chr2 140611599 140611677 -110076177 + MER21B LTR ERV1 13 89 -774 2753 237 75 29 chr2 140611696 140612452 -110075402 + MER21B LTR ERV1 16 806 -57 1971 127 68 0 chr2 140612671 140612963 -110074891 + AluSx SINE Alu 1 312 0 190 299 119 0 chr2 140613197 140613264 -110074590 + L2 LINE L2 3178 3252 -20 380 262 79 67 chr2 140613270 140613434 -110074420 + MER69A DNA AcHobo 10 175 -2 643 273 91 13 chr2 140614808 140615039 -110072815 - MIR SINE MIR 0 262 14 437 288 62 34 chr2 140615210 140615356 -110072498 + MIR SINE MIR 15 164 -98 36 0 0 0 chr2 140615412 140615448 -110072406 + AT_rich Low_complexity Low_complexity 1 36 0 290 267 71 115 chr2 140615954 140616530 -110071324 + L1MEd LINE L1 658 1208 -4911 244 229 0 0 chr2 140616851 140616899 -110070955 + MLT1K LTR MaLR 195 242 -346 709 229 88 99 chr2 140617676 140618039 -110069815 - MLT1A1 LTR MaLR -1 364 68 2111 138 0 0 chr2 140618039 140618351 -110069503 + AluSx SINE Alu 1 312 0 709 229 88 99 chr2 140618351 140618419 -110069435 - MLT1A1 LTR MaLR -297 68 1 24 0 0 0 chr2 140619082 140619106 -110068748 + AT_rich Low_complexity Low_complexity 1 24 0 274 295 143 19 chr2 140619897 140620002 -110067852 - L2 LINE L2 -11 3302 3185 207 0 0 0 chr2 140620548 140620571 -110067283 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 226 310 14 0 chr2 140620677 140620748 -110067106 + L2 LINE L2 3237 3308 -5 429 255 28 0 chr2 140623725 140623831 -110064023 + MER81 DNA DNA 3 111 -3 202 310 0 0 chr2 140623937 140623995 -110063859 + L2 LINE L2 2865 2922 -350 340 363 29 29 chr2 140624556 140624760 -110063094 + L1MEd LINE L1 1041 1244 -4875 278 274 35 93 chr2 140624817 140625043 -110062811 + HAL1 LINE L1 1363 1575 -932 325 306 75 41 chr2 140625369 140625905 -110061949 + L1MEd LINE L1 2621 3174 -2955 335 126 34 0 chr2 140626214 140626283 -110061571 - L1MB5 LINE L1 -266 5908 5862 947 290 21 12 chr2 140626283 140626621 -110061233 - L1MCb LINE L1 -3362 3202 2862 652 240 134 11 chr2 140626704 140626883 -110060971 + MLT1A2 LTR MaLR 174 374 0 4209 217 98 55 chr2 140626900 140627789 -110060065 - L1MCb LINE L1 -3969 2595 1746 315 0 0 0 chr2 140627789 140627824 -110060030 + (TG)n Simple_repeat Simple_repeat 2 36 0 4209 217 98 55 chr2 140627824 140628817 -110059037 - L1MCb LINE L1 -4818 1746 570 1243 272 83 60 chr2 140628895 140629458 -110058396 - L1MCb LINE L1 -5469 576 1 1825 139 17 7 chr2 140630127 140630429 -110057425 - THE1A LTR MaLR -50 305 1 544 245 80 13 chr2 140630429 140630566 -110057288 - MLT1G1 LTR MaLR -443 152 6 404 281 47 117 chr2 140630572 140631017 -110056837 - MLT1G1-int LTR MaLR -2 1369 956 1345 209 43 51 chr2 140631851 140632225 -110055629 - MLT1A2 LTR MaLR 0 374 4 2183 240 16 24 chr2 140632229 140632720 -110055134 - MLT1A2-int LTR MaLR -1 1734 1248 304 214 0 0 chr2 140632809 140632865 -110054989 - MLT1A2-int LTR MaLR -994 741 686 199 240 40 20 chr2 140632989 140633039 -110054815 + MER5A DNA MER1_type 56 106 -83 33 0 0 0 chr2 140633159 140633192 -110054662 + AT_rich Low_complexity Low_complexity 1 33 0 1877 179 0 3 chr2 140633298 140633605 -110054249 - AluJb SINE Alu -6 306 1 342 284 98 57 chr2 140635186 140635380 -110052474 + MLT1L LTR MaLR 5 206 -409 21 57 0 0 chr2 140635764 140635799 -110052055 + AT_rich Low_complexity Low_complexity 1 35 0 331 316 109 43 chr2 140637317 140637665 -110050189 + HAL1 LINE L1 1395 1765 -742 29 0 0 0 chr2 140637686 140637715 -110050139 + AT_rich Low_complexity Low_complexity 1 29 0 791 197 5 103 chr2 140638400 140638603 -110049251 - AluJo SINE Alu -126 186 4 27 29 0 0 chr2 140639596 140639630 -110048224 + AT_rich Low_complexity Low_complexity 1 34 0 205 178 0 0 chr2 140639742 140639787 -110048067 + A-rich Low_complexity Low_complexity 1 45 0 259 229 179 36 chr2 140640403 140640682 -110047172 + L1MDa LINE L1 1510 1828 -4712 333 351 45 0 chr2 140641345 140641479 -110046375 + L1MC/D LINE L1 5405 5544 -2264 194 119 48 0 chr2 140641506 140641548 -110046306 + (CATA)n Simple_repeat Simple_repeat 1 44 0 235 268 0 0 chr2 140641664 140641720 -110046134 + L2 LINE L2 3256 3311 -2 24 32 0 0 chr2 140641746 140641777 -110046077 + AT_rich Low_complexity Low_complexity 1 31 0 411 277 97 72 chr2 140642169 140642447 -110045407 + L1M2a LINE L1 604 888 -6280 * 718 270 5 25 chr2 140642445 140642641 -110045213 + L1M2a LINE L1 642 833 -6335 5626 229 9 5 chr2 140642644 140643750 -110044104 + L1M2a LINE L1 689 1798 -5370 * 5965 204 25 14 chr2 140643748 140644905 -110042949 + L1M2a LINE L1 3208 4385 -2782 2293 176 21 5 chr2 140644905 140645331 -110042523 - Tigger2a DNA MER2_type -1 433 1 5965 204 25 14 chr2 140645331 140645637 -110042217 + L1M2a LINE L1 4385 4686 -2481 5346 8 5 3 chr2 140645641 140646246 -110041608 + L1HS LINE L1 5533 6141 -14 260 27 27 0 chr2 140646246 140646283 -110041571 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 1892 216 17 0 chr2 140646291 140646713 -110041141 + L1M2a LINE L1 4591 5019 -2148 * 2291 274 0 60 chr2 140646711 140647258 -110040596 + L1MA5 LINE L1 5785 6298 -2 202 326 179 11 chr2 140647676 140647771 -110040083 + MIR SINE MIR 21 131 -131 371 187 29 73 chr2 140648400 140648570 -110039284 - LTR50 LTR ERVL 0 795 628 582 263 39 0 chr2 140648936 140649092 -110038762 - LTR41 LTR ERVL -609 164 3 2880 303 27 14 chr2 140649383 140650888 -110036966 - ERVL LTR ERVL -286 5478 3892 857 345 31 19 chr2 140651016 140651439 -110036415 - ERVL LTR ERVL -2139 3515 3088 448 277 17 82 chr2 140651843 140652074 -110035780 - ERVL LTR ERVL -5078 686 471 1250 322 62 39 chr2 140652814 140653618 -110034236 + L1M4 LINE L1 2 824 -5718 2074 217 31 86 chr2 140653652 140654855 -110032999 + L1M4 LINE L1 2420 3543 -3101 16542 201 43 21 chr2 140654870 140656824 -110031030 + L1PA13 LINE L1 2 1911 -4886 1646 193 0 3 chr2 140656824 140657140 -110030714 - AluSx SINE Alu 0 315 1 16542 201 43 21 chr2 140657140 140659447 -110028407 + L1PA13 LINE L1 1911 4478 -2319 1452 220 40 0 chr2 140659447 140659743 -110028111 + AluJb SINE Alu 1 308 -4 16542 201 43 21 chr2 140659743 140661322 -110026532 + L1PA13 LINE L1 4478 6021 -776 3744 202 22 10 chr2 140661319 140662443 -110025411 + L1MA9 LINE L1 4969 6106 -206 * 5843 61 14 0 chr2 140662443 140663185 -110024669 - L1PA7 LINE L1 -91 6063 5312 788 30 30 0 chr2 140663185 140663279 -110024575 + L1PA7 LINE L1 6051 6154 0 256 200 67 0 chr2 140663340 140663400 -110024454 + L1MA9 LINE L1 6156 6219 -93 204 333 11 11 chr2 140664247 140664340 -110023514 + (CATATA)n Simple_repeat Simple_repeat 1 93 0 208 231 0 0 chr2 140666292 140666331 -110021523 + (CA)n Simple_repeat Simple_repeat 1 39 0 7506 143 12 43 chr2 140666336 140667315 -110020539 - HSMAR2 DNA Mariner -1 1301 372 1992 83 63 40 chr2 140667315 140667615 -110020239 + AluSq SINE Alu 1 307 -6 7506 143 12 43 chr2 140667615 140667968 -110019886 - HSMAR2 DNA Mariner -930 372 10 326 288 15 61 chr2 140668202 140668334 -110019520 - MER117 DNA MER1_type -61 136 11 228 372 0 0 chr2 140668874 140668952 -110018902 + L2 LINE L2 3236 3313 0 476 296 170 9 chr2 140669696 140669919 -110017935 - MIR SINE MIR 0 262 4 440 250 70 0 chr2 140671176 140671276 -110016578 - MER81 DNA DNA -1 113 7 434 323 85 46 chr2 140672164 140672492 -110015362 - MER102b DNA MER1_type 0 341 1 201 339 75 54 chr2 140673590 140674147 -110013707 + L2 LINE L2 1552 2120 -1194 188 350 131 11 chr2 140674431 140674614 -110013240 + L2 LINE L2 2618 2822 -492 213 294 0 73 chr2 140675283 140675351 -110012503 + L2 LINE L2 3200 3262 -10 327 408 73 5 chr2 140675377 140675595 -110012259 + MLT1K LTR MaLR 14 246 -342 258 322 38 38 chr2 140675748 140675931 -110011923 + MLT1K LTR MaLR 399 581 -7 360 322 25 8 chr2 140676176 140676297 -110011557 - MIR3 SINE MIR -3 205 83 2780 92 20 10 chr2 140676442 140676842 -110011012 + MLT2A1 LTR ERVL 1 404 -40 419 184 0 10 chr2 140676842 140676940 -110010914 + (TA)n Simple_repeat Simple_repeat 2 98 0 359 89 0 18 chr2 140676940 140676996 -110010858 + MLT2A1 LTR ERVL 390 444 0 23 0 0 0 chr2 140678692 140678715 -110009139 + AT_rich Low_complexity Low_complexity 1 23 0 515 267 30 0 chr2 140679442 140679577 -110008277 - MIR SINE MIR 0 262 124 341 339 23 92 chr2 140679665 140679839 -110008015 - L2 LINE L2 0 3272 3111 1059 149 14 42 chr2 140680545 140680760 -110007094 + Tigger2a DNA MER2_type 1 209 -225 4179 119 21 18 chr2 140680766 140681440 -110006414 - L1PA14 LINE L1 -2 6159 5484 817 84 0 142 chr2 140681445 140681600 -110006254 - MER41A-int LTR ERV1 -3342 2604 2472 1798 161 6 12 chr2 140681611 140681934 -110005920 + THE1C LTR MaLR 55 375 0 2250 131 49 16 chr2 140681963 140682465 -110005389 - MER41A-int LTR ERV1 -3929 2017 1395 * 5947 118 51 10 chr2 140682462 140683347 -110004507 - MER41A-int LTR ERV1 -5022 924 4 1144 84 7 0 chr2 140683350 140683505 -110004349 - MER41A LTR ERV1 0 554 399 558 130 0 0 chr2 140683521 140683613 -110004241 - L1MA3 LINE L1 0 6305 6214 1239 178 39 4 chr2 140683613 140683843 -110004011 + Tigger2a DNA MER2_type 207 444 0 1326 219 104 25 chr2 140683972 140684374 -110003480 - MER63B DNA MER1_type -2 434 1 1968 290 73 65 chr2 140684613 140685823 -110002031 + L1M3c LINE L1 3 1221 -4920 4522 144 20 17 chr2 140685825 140685922 -110001932 + L1PA15 LINE L1 5403 5498 -667 2043 133 0 0 chr2 140685922 140686253 -110001601 + AluSx SINE Alu 1 331 0 4522 144 20 17 chr2 140686253 140686915 -110000939 + L1PA15 LINE L1 5498 6165 0 2146 286 31 21 chr2 140686902 140687745 -110000109 + L1M4c LINE L1 969 1819 -4565 * 726 190 13 13 chr2 140687815 140687853 -110000001 + L1M3c LINE L1 1429 1466 -4675 632 189 0 25 chr2 140687853 140687975 -109999879 + FLAM_C SINE Alu 1 119 -14 726 190 13 13 chr2 140687975 140688121 -109999733 + L1M3c LINE L1 1465 1613 -4528 333 0 0 0 chr2 140688209 140688223 -109999631 + (TG)n Simple_repeat Simple_repeat 1 51 0 333 0 0 0 chr2 140688223 140688260 -109999594 + (TG)n Simple_repeat Simple_repeat 2 38 0 878 206 0 0 chr2 140688303 140688449 -109999405 + FRAM SINE Alu 6 151 -25 1196 77 6 0 chr2 140688449 140688618 -109999236 + (GGAA)n Simple_repeat Simple_repeat 3 172 0 2786 223 11 26 chr2 140688735 140689429 -109998425 + L1MA10 LINE L1 5650 6333 -1 2536 45 7 7 chr2 140689855 140690164 -109997690 - AluY SINE Alu -2 309 1 321 232 62 45 chr2 140690711 140690823 -109997031 + MER103 DNA DNA 4 117 -49 23 0 0 0 chr2 140690883 140690906 -109996948 + AT_rich Low_complexity Low_complexity 1 23 0 1032 286 15 4 chr2 140692100 140692359 -109995495 + LTR33 LTR ERVL 1 262 -259 2310 51 0 4 chr2 140692550 140692823 -109995031 + AluY SINE Alu 31 302 -9 654 210 0 22 chr2 140693568 140693706 -109994148 - AluJb SINE Alu -7 305 171 1451 218 13 13 chr2 140695168 140695466 -109992388 + AluJo SINE Alu 1 298 -14 2776 178 22 17 chr2 140695699 140696301 -109991553 - L1 LINE L1 -1590 4556 3952 1181 191 43 62 chr2 140696305 140696700 -109991154 - MLT1C LTR MaLR -26 364 1 1947 130 0 14 chr2 140696761 140697094 -109990760 + AluSc SINE Alu 1 329 0 498 204 41 0 chr2 140697274 140697372 -109990482 + Tigger7 DNA MER2_type 3 104 -446 275 320 68 26 chr2 140697556 140698243 -109989611 - L1MEc LINE L1 -4578 1818 1103 1875 187 86 10 chr2 140699129 140699525 -109988329 + MSTB LTR MaLR 1 426 0 879 275 111 49 chr2 140699775 140700285 -109987569 - MLT1G1 LTR MaLR 0 595 1 23 33 0 0 chr2 140700373 140700403 -109987451 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 140700424 140700445 -109987409 + AT_rich Low_complexity Low_complexity 1 21 0 251 229 98 0 chr2 140700791 140700852 -109987002 - Harlequin LTR ERV1 -3100 3796 3730 36 53 0 0 chr2 140701774 140701831 -109986023 + AT_rich Low_complexity Low_complexity 1 57 0 23 78 0 0 chr2 140701910 140701961 -109985893 + AT_rich Low_complexity Low_complexity 1 51 0 195 162 0 0 chr2 140701997 140702034 -109985820 + (TG)n Simple_repeat Simple_repeat 2 38 0 3889 220 80 4 chr2 140702184 140703986 -109983868 + L1MB4 LINE L1 4165 6101 -79 244 239 34 40 chr2 140704022 140704198 -109983656 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 * 280 234 22 49 chr2 140704110 140704294 -109983560 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 323 336 27 60 chr2 140704362 140704511 -109983343 + MIR SINE MIR 40 183 -79 764 160 8 0 chr2 140704690 140704815 -109983039 + FLAM_C SINE Alu 7 132 -11 2148 122 0 0 chr2 140705343 140705638 -109982216 + AluSg1 SINE Alu 2 296 -13 896 195 58 0 chr2 140706022 140706196 -109981658 - MER2 DNA MER2_type -1 344 161 814 192 27 0 chr2 140706207 140706353 -109981501 - FRAM SINE Alu -25 151 2 788 178 89 13 chr2 140706355 140706512 -109981342 - MER2 DNA MER2_type -175 170 2 1753 151 42 68 chr2 140706880 140707263 -109980591 + THE1C LTR MaLR 1 373 -2 1791 122 56 0 chr2 140707757 140708043 -109979811 + L1PA15 LINE L1 5861 6162 -3 209 317 50 0 chr2 140708239 140708299 -109979555 - MIR3 SINE MIR -46 162 100 668 288 98 56 chr2 140708481 140708929 -109978925 + MLT1H LTR MaLR 83 549 0 21 0 0 0 chr2 140709120 140709141 -109978713 + AT_rich Low_complexity Low_complexity 1 21 0 668 127 104 29 chr2 140709571 140709744 -109978110 - MER53 DNA DNA -3 186 1 2176 122 72 48 chr2 140709786 140710054 -109977800 - MSTA LTR MaLR 0 428 145 2011 110 0 42 chr2 140710054 140710363 -109977491 + AluSx SINE Alu 2 297 -15 2176 122 72 48 chr2 140710363 140710512 -109977342 - MSTA LTR MaLR -283 145 1 196 417 0 0 chr2 140711038 140711098 -109976756 - L2 LINE L2 -92 3180 3121 404 305 62 11 chr2 140711375 140711552 -109976302 + MIR SINE MIR 77 262 0 344 122 0 0 chr2 140711718 140711767 -109976087 + FRAM/FAM SINE Alu 20 68 -98 4130 154 28 4 chr2 140711769 140712457 -109975397 + MER50 LTR ERV1 1 704 -30 347 183 5 6 chr2 140712463 140712539 -109975315 + FLAM_A SINE Alu 67 133 0 683 131 0 19 chr2 140712540 140712647 -109975207 + AluJo/FRAM SINE Alu 184 288 -24 918 260 101 36 chr2 140713426 140713864 -109973990 + L1ME3A LINE L1 5502 5967 -203 327 298 37 83 chr2 140713916 140714134 -109973720 + L1ME3A LINE L1 5963 6170 0 438 299 55 25 chr2 140714220 140714421 -109973433 - MIR SINE MIR -48 214 8 2247 73 0 24 chr2 140714829 140715145 -109972709 + AluY SINE Alu 1 309 0 560 297 115 57 chr2 140715192 140715610 -109972244 - L2 LINE L2 0 3313 2872 766 309 125 11 chr2 140715697 140716056 -109971798 - MLT1J LTR MaLR -110 401 2 1971 203 19 30 chr2 140716524 140716996 -109970858 + MLT1C LTR MaLR 1 467 0 1847 184 34 21 chr2 140717444 140717829 -109970025 + MLT1B LTR MaLR 1 390 0 2264 184 24 30 chr2 140717829 140718435 -109969419 + MLT1B-int LTR MaLR 1 711 -660 336 167 0 0 chr2 140718425 140718485 -109969369 + MLT1B-int LTR MaLR 825 884 -487 * 1896 209 44 15 chr2 140718942 140719349 -109968505 + MLT1B-int LTR MaLR 952 1370 -1 1919 145 14 90 chr2 140719350 140719771 -109968083 + MLT1B LTR MaLR 1 389 -1 628 227 41 41 chr2 140720966 140721138 -109966716 - MIR SINE MIR 0 262 91 467 267 53 13 chr2 140721289 140721439 -109966415 + MIR3 SINE MIR 16 171 -37 226 115 39 0 chr2 140721539 140721591 -109966263 + GA-rich Low_complexity Low_complexity 1 54 0 1124 171 40 11 chr2 140721865 140722189 -109965665 - MSTD LTR MaLR 0 396 1 210 354 12 75 chr2 140722606 140722767 -109965087 - L2 LINE L2 -6 3266 3116 222 331 66 66 chr2 140723120 140723256 -109964598 - L2 LINE L2 0 3272 3137 182 359 47 0 chr2 140724498 140724562 -109963292 + MIR SINE MIR 85 151 -111 192 250 131 24 chr2 140725766 140725850 -109962004 + MIR SINE MIR 139 231 -31 1649 173 42 7 chr2 140726997 140727286 -109960568 - AluJo SINE Alu -13 299 1 3788 209 83 57 chr2 140729332 140730425 -109957429 + Charlie1a DNA MER1_type 10 1131 -324 35725 102 9 12 chr2 140730436 140734145 -109953709 + L1PA6 LINE L1 11 3695 -2459 333 0 0 0 chr2 140734145 140734182 -109953672 + (CA)n Simple_repeat Simple_repeat 2 38 0 35725 102 9 12 chr2 140734182 140736632 -109951222 + L1PA6 LINE L1 3695 6151 -3 1045 155 79 35 chr2 140736632 140736949 -109950905 + Charlie1a DNA MER1_type 1125 1455 0 13665 122 13 6 chr2 140738797 140741184 -109946670 - L1PA8A LINE L1 -700 5746 3343 7137 109 15 8 chr2 140741188 140742302 -109945552 - L1PA8A LINE L1 -4753 1122 1 1918 161 128 13 chr2 140742605 140742989 -109944865 + MSTA LTR MaLR 1 428 0 330 138 0 0 chr2 140744312 140744370 -109943484 + (GGAA)n Simple_repeat Simple_repeat 2 59 0 212 149 0 43 chr2 140745641 140745688 -109942166 + (TTATA)n Simple_repeat Simple_repeat 4 48 0 184 282 204 19 chr2 140746321 140746424 -109941430 - L3b LINE CR1 -18 1565 1444 231 173 0 0 chr2 140746450 140746502 -109941352 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 221 224 0 0 chr2 140746918 140746967 -109940887 + L2 LINE L2 3264 3312 -1 1581 195 32 32 chr2 140748416 140748755 -109939099 + MER44D DNA MER2_type 1 609 0 234 337 12 0 chr2 140748948 140749048 -109938806 + GA-rich Low_complexity Low_complexity 1 101 0 317 298 61 18 chr2 140749500 140749614 -109938240 - MIR3 SINE MIR -7 201 83 29 0 0 0 chr2 140750035 140750064 -109937790 + AT_rich Low_complexity Low_complexity 1 29 0 371 252 223 0 chr2 140750800 140750939 -109936915 + MER5A DNA MER1_type 11 180 -9 291 54 0 0 chr2 140751000 140751037 -109936817 + (CA)n Simple_repeat Simple_repeat 1 37 0 292 315 36 42 chr2 140751073 140751238 -109936616 + MIR3 SINE MIR 40 203 -5 490 232 196 61 chr2 140751353 140751428 -109936426 + MER102a DNA MER1_type 1 64 -1353 2140 80 3 33 chr2 140751428 140751728 -109936126 + AluSc SINE Alu 2 292 -17 490 232 196 61 chr2 140751728 140751932 -109935922 + MER102a DNA MER1_type 64 318 -12 1665 226 40 55 chr2 140752265 140752815 -109935039 - MER34 LTR ERV1 0 542 1 529 347 96 42 chr2 140752890 140753316 -109934538 - L2 LINE L2 -5 3267 2819 1205 193 9 0 chr2 140754644 140754862 -109932992 + MER58A DNA MER1_type 2 221 -3 585 321 46 8 chr2 140755141 140755381 -109932473 - MIR SINE MIR -3 259 11 2159 50 3 61 chr2 140755723 140756065 -109931789 - AluY SINE Alu 0 325 1 834 95 0 0 chr2 140756098 140756214 -109931640 - L1PA10 LINE L1 -11 6157 6042 774 351 91 31 chr2 140758497 140759234 -109928620 - L2 LINE L2 -3 3310 2539 186 276 103 0 chr2 140759422 140759480 -109928374 - MER5A DNA MER1_type -73 116 53 1011 151 32 64 chr2 140760139 140760300 -109927554 + THE1B LTR MaLR 1 166 -198 285 29 0 0 chr2 140760300 140760334 -109927520 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2823 56 14 0 chr2 140760335 140760695 -109927159 - L1PA7 LINE L1 -16 6138 5774 1011 151 32 64 chr2 140760695 140760750 -109927104 + THE1B LTR MaLR 165 212 -152 5400 93 17 0 chr2 140760759 140761514 -109926340 + THE1B-int LTR MaLR 813 1580 0 2181 128 22 30 chr2 140761514 140761881 -109925973 + THE1B LTR MaLR 1 364 0 186 364 88 65 chr2 140762245 140762643 -109925211 + L2 LINE L2 2825 3231 -41 196 179 26 0 chr2 140762751 140762790 -109925064 - MER5B DNA MER1_type -135 43 4 306 0 0 0 chr2 140763618 140763652 -109924202 + (CA)n Simple_repeat Simple_repeat 2 35 0 319 304 20 29 chr2 140764200 140764302 -109923552 - MIR SINE MIR -161 101 1 2940 143 52 19 chr2 140765917 140766511 -109921343 + L1MA8 LINE L1 5658 6271 -20 225 214 0 0 chr2 140767176 140767218 -109920636 + Tigger3(Golem) DNA MER2_type 2997 3038 0 264 268 45 40 chr2 140767503 140767701 -109920153 + L1ME2 LINE L1 1274 1472 -4951 232 286 116 0 chr2 140767754 140767901 -109919953 + L1ME2 LINE L1 1588 1751 -5192 985 316 121 22 chr2 140768000 140768544 -109919310 + L1ME2 LINE L1 1961 2558 -4564 1770 173 0 47 chr2 140768707 140769025 -109918829 - AluSx SINE Alu -9 303 1 243 182 0 0 chr2 140769027 140769071 -109918783 + L3 LINE CR1 642 685 -892 1817 256 156 33 chr2 140769084 140770714 -109917140 + L1ME2 LINE L1 3068 4898 -2043 201 167 146 0 chr2 140772604 140772652 -109915202 - MIR SINE MIR -75 187 133 1541 267 100 39 chr2 140772855 140774459 -109913395 + L1ME2 LINE L1 4869 6567 -394 279 0 0 0 chr2 140774466 140774497 -109913357 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 311 269 19 29 chr2 140774506 140774610 -109913244 + L1ME2 LINE L1 6625 6727 -234 26 0 0 0 chr2 140775235 140775261 -109912593 + AT_rich Low_complexity Low_complexity 1 26 0 765 225 38 34 chr2 140776454 140776690 -109911164 + L1ME2 LINE L1 6714 6950 -9 527 315 219 10 chr2 140777942 140778326 -109909528 + L2 LINE L2 2829 3292 -21 281 333 52 0 chr2 140779710 140779806 -109908048 - L2 LINE L2 -9 3304 3204 526 293 92 0 chr2 140780266 140780430 -109907424 + MIR SINE MIR 18 196 -66 22 35 0 0 chr2 140780721 140780750 -109907104 + AT_rich Low_complexity Low_complexity 1 29 0 15175 96 24 11 chr2 140781172 140782608 -109905246 - L1PA7 LINE L1 -2 6152 4735 2220 123 7 10 chr2 140782608 140782917 -109904937 - AluSq SINE Alu -5 308 1 15175 96 24 11 chr2 140782917 140784587 -109903267 - L1PA7 LINE L1 -1419 4735 3013 357 224 13 0 chr2 140784836 140784912 -109902942 + MIR SINE MIR 119 195 -67 211 394 0 0 chr2 140785250 140785321 -109902533 - MIR SINE MIR -96 112 42 1871 79 106 8 chr2 140785700 140785965 -109901889 + AluY SINE Alu 1 291 -20 1615 291 28 31 chr2 140786285 140786890 -109900964 + MLT2F LTR ERVL 3 605 -58 1684 192 55 0 chr2 140786918 140787261 -109900593 - MLT1A1 LTR MaLR 0 365 4 240 35 0 0 chr2 140787284 140787313 -109900541 + (GA)n Simple_repeat Simple_repeat 1 29 0 273 240 156 21 chr2 140787383 140787479 -109900375 + L2 LINE L2 3149 3257 -15 1414 199 64 25 chr2 140787785 140788067 -109899787 + AluJo SINE Alu 5 297 -15 406 326 118 34 chr2 140788144 140788558 -109899296 - LTR33 LTR ERVL 0 521 73 778 313 122 18 chr2 140790423 140790874 -109896980 + MLT2F LTR ERVL 1 498 -165 244 220 83 37 chr2 140792188 140792297 -109895557 - MLT1J LTR MaLR -174 337 224 251 254 140 9 chr2 140792359 140792473 -109895381 - MLT1J LTR MaLR -382 129 1 409 325 102 60 chr2 140792479 140792892 -109894962 - L3 LINE CR1 -90 1487 1058 233 273 107 87 chr2 140793790 140793940 -109893914 - MLT1K LTR MaLR -219 369 217 380 285 135 19 chr2 140794176 140794383 -109893471 + MIR SINE MIR 31 261 -1 304 256 6 98 chr2 140795054 140795218 -109892636 + LTR16A1 LTR ERVL 254 402 -55 674 310 90 21 chr2 140795647 140796115 -109891739 + LTR33 LTR ERVL 1 500 -21 826 191 117 32 chr2 140796334 140796499 -109891355 + MER33 DNA MER1_type 3 153 -2432 2389 126 28 17 chr2 140796499 140796857 -109890997 + THE1B LTR MaLR 1 362 -2 826 191 117 32 chr2 140796857 140796974 -109890880 + MER33 DNA MER1_type 153 309 -15 1783 83 2 0 chr2 140797413 140797744 -109890110 + L1PA8 LINE L1 5747 6171 -1 550 325 73 7 chr2 140798081 140798465 -109889389 - MLT1K LTR MaLR 0 588 138 21 57 0 0 chr2 140798593 140798628 -109889226 + AT_rich Low_complexity Low_complexity 1 35 0 190 309 0 44 chr2 140799035 140799103 -109888751 - L2 LINE L2 -6 3266 3202 21 36 0 0 chr2 140800283 140800311 -109887543 + AT_rich Low_complexity Low_complexity 1 28 0 30 27 0 0 chr2 140800537 140800574 -109887280 + AT_rich Low_complexity Low_complexity 1 37 0 1256 35 0 0 chr2 140800905 140801049 -109886805 - SVA Other Other 0 1386 1243 24 39 0 0 chr2 140801132 140801158 -109886696 + GC_rich Low_complexity Low_complexity 1 26 0 4574 202 34 36 chr2 140801513 140802831 -109885023 + L1 LINE L1 2177 3491 -2655 595 0 0 26 chr2 140802931 140803008 -109884846 + (TCTCCC)n Simple_repeat Simple_repeat 1 75 0 4214 34 6 0 chr2 140803013 140803486 -109884368 + SVA Other Other 740 1215 -171 816 264 5 10 chr2 140803974 140804182 -109883672 + MER58A DNA MER1_type 4 210 -14 1556 162 51 92 chr2 140804306 140804719 -109883135 + MER57A LTR ERV1 8 403 0 6317 101 7 1 chr2 140804824 140805855 -109881999 + L1PA10 LINE L1 5132 6167 -1 224 333 14 0 chr2 140806279 140806351 -109881503 - MIR SINE MIR -162 100 28 376 345 10 31 chr2 140807484 140807678 -109880176 + MIR3 SINE MIR 12 201 -7 253 83 104 0 chr2 140809461 140809509 -109878345 - L1MB4 LINE L1 -1 6179 6127 1359 140 44 0 chr2 140809512 140809762 -109878092 - L1MA9 LINE L1 -6 6306 6046 754 150 7 20 chr2 140809762 140809909 -109877945 - L1MB3 LINE L1 -38 6145 6001 2077 125 3 0 chr2 140810442 140810750 -109877104 + AluSx SINE Alu 2 312 0 200 324 93 0 chr2 140810810 140810918 -109876936 - L2 LINE L2 -18 3295 3178 983 116 0 172 chr2 140811469 140811702 -109876152 + 7SK RNA RNA 1 193 0 2411 101 0 0 chr2 140811797 140812105 -109875749 - AluSg SINE Alu -1 309 2 499 251 89 44 chr2 140812471 140812610 -109875244 - L2 LINE L2 0 3313 3161 297 51 0 0 chr2 140812610 140812649 -109875205 + (CA)n Simple_repeat Simple_repeat 2 40 0 499 251 89 44 chr2 140812649 140812712 -109875142 - L2 LINE L2 -152 3161 3102 776 264 94 43 chr2 140812729 140813058 -109874796 - L2 LINE L2 -629 2685 2340 13131 131 37 33 chr2 140813221 140813845 -109874009 + Tigger1 DNA MER2_type 2 622 -1796 4452 63 5 28 chr2 140813845 140814446 -109873408 + LTR14C LTR ERVK 1 587 0 13131 131 37 33 chr2 140814446 140816195 -109871659 + Tigger1 DNA MER2_type 622 2383 -35 321 93 0 0 chr2 140816477 140816531 -109871323 + (CA)n Simple_repeat Simple_repeat 2 55 0 2045 112 72 0 chr2 140817184 140817460 -109870394 + AluSg SINE Alu 1 296 -14 395 322 45 84 chr2 140818074 140818561 -109869293 - MLT1K LTR MaLR -19 569 102 815 119 0 0 chr2 140818805 140818914 -109868940 - AluSx SINE Alu -18 294 186 221 94 0 0 chr2 140818914 140818946 -109868908 + L2 LINE L2 3239 3270 -2 1382 140 0 0 chr2 140818995 140819195 -109868659 - AluSx SINE Alu -112 200 1 727 270 86 48 chr2 140819302 140819880 -109867974 - MLT1H1 LTR MaLR 0 555 1 611 291 68 84 chr2 140820147 140820290 -109867564 + L1ME4a LINE L1 5449 5593 -528 1317 198 50 46 chr2 140820290 140820593 -109867261 + AluJo SINE Alu 1 304 -8 611 291 68 84 chr2 140820593 140821065 -109866789 + L1ME4a LINE L1 5593 6054 -67 438 284 55 22 chr2 140822225 140822408 -109865446 - LTR16A LTR ERVL -5 445 257 1042 271 55 39 chr2 140874663 140875389 -109812465 - L1M4 LINE L1 -1971 4175 3438 323 289 86 0 chr2 140875411 140875539 -109812315 - L1M4 LINE L1 -2812 3334 3196 998 237 0 4 chr2 140875540 140875810 -109812044 - L1 LINE L1 -1466 4680 4412 1281 133 0 6 chr2 140876784 140876964 -109810890 + AluSx SINE Alu 1 179 -133 21 0 0 0 chr2 140877083 140877104 -109810750 + AT_rich Low_complexity Low_complexity 1 21 0 581 88 0 0 chr2 140877177 140877257 -109810597 + MADE1 DNA Mariner 1 80 0 473 340 102 48 chr2 140877307 140877639 -109810215 - L2 LINE L2 -4 3268 2919 395 398 54 40 chr2 140877650 140878002 -109809852 - L2 LINE L2 -2 3270 2914 558 0 0 0 chr2 140878008 140878070 -109809784 + (TG)n Simple_repeat Simple_repeat 2 63 0 393 280 34 114 chr2 140878071 140878396 -109809458 - L2 LINE L2 -450 2864 2566 1347 132 5 5 chr2 140878496 140878686 -109809168 - AluSx SINE Alu -122 190 1 867 299 51 38 chr2 140878868 140879320 -109808534 - LTR33 LTR ERVL 0 521 64 2103 141 3 0 chr2 140879321 140879620 -109808234 + AluSx SINE Alu 1 300 -12 2162 109 45 19 chr2 140880231 140880607 -109807247 + L1MA4A LINE L1 5912 6297 -6 1012 163 0 0 chr2 140880639 140880792 -109807062 - AluSg/x SINE Alu -7 305 153 342 175 0 0 chr2 140881043 140881123 -109806731 + (TG)n Simple_repeat Simple_repeat 1 80 0 1721 166 16 39 chr2 140881430 140881737 -109806117 + AluJo SINE Alu 1 300 -12 475 308 0 23 chr2 140882005 140882138 -109805716 + MIR SINE MIR 23 152 -110 3516 155 30 122 chr2 140882244 140883197 -109804657 + MER21A LTR ERV1 40 905 -26 1424 194 32 51 chr2 140883621 140883935 -109803919 - AluJb SINE Alu 0 312 5 499 332 39 10 chr2 140884035 140884243 -109803611 + L2 LINE L2 3100 3313 0 312 333 31 39 chr2 140886260 140886389 -109801465 + L2 LINE L2 3142 3269 -3 204 263 20 0 chr2 140886561 140886618 -109801236 - MIR SINE MIR -65 143 92 2252 84 3 0 chr2 140887109 140887408 -109800446 + AluSx SINE Alu 1 300 -12 2044 183 28 65 chr2 140888435 140889005 -109798849 + L1MC3 LINE L1 7237 7785 0 288 302 121 9 chr2 140894319 140894435 -109793419 - MIR SINE MIR -57 151 23 2179 135 28 0 chr2 140895166 140895522 -109792332 + MER47A DNA MER2_type 1 366 0 1571 184 11 41 chr2 140895600 140896053 -109791801 - MLT2B1 LTR ERVL -8 507 1 231 303 74 34 chr2 140896483 140896658 -109791196 + MLT1J1 LTR MaLR 74 255 -191 409 253 72 69 chr2 140897885 140898195 -109789659 + MLT1I LTR MaLR 85 549 0 424 343 122 16 chr2 140898195 140898507 -109789347 - LTR33 LTR ERVL -122 399 55 1827 48 136 12 chr2 140900307 140900601 -109787253 + AluY SINE Alu 1 325 0 29 78 0 0 chr2 140900739 140900803 -109787051 + AT_rich Low_complexity Low_complexity 1 64 0 2252 103 7 0 chr2 140900812 140901114 -109786740 + AluSg SINE Alu 1 304 -6 592 270 50 88 chr2 140901351 140901848 -109786006 - MLT1J LTR MaLR -23 488 11 365 291 8 17 chr2 140901876 140901993 -109785861 + GA-rich Low_complexity Low_complexity 4 119 0 363 314 77 8 chr2 140902153 140902414 -109785440 + L1ME4a LINE L1 5561 5839 -282 1470 191 0 80 chr2 140903487 140903811 -109784043 + AluJb SINE Alu 1 298 -14 2045 114 4 0 chr2 140904733 140905049 -109782805 - AluSg SINE Alu 0 317 1 535 291 129 9 chr2 140906355 140906565 -109781289 + MIR SINE MIR 7 241 -21 335 301 53 53 chr2 140906572 140906685 -109781169 + L2 LINE L2 3160 3272 0 754 311 60 17 chr2 140906806 140907108 -109780746 + MLT1I LTR MaLR 90 404 -5 2061 119 0 30 chr2 140907273 140907575 -109780279 - AluSg SINE Alu -17 293 1 1722 164 39 4 chr2 140907579 140907859 -109779995 - AluJo SINE Alu -22 290 1 936 136 35 24 chr2 140909534 140909703 -109778151 - LTR35 LTR ERV1 -30 588 418 2204 153 52 5 chr2 140909703 140910103 -109777751 + MER4B LTR ERV1 1 419 -191 1502 177 88 11 chr2 140910237 140910599 -109777255 + Zaphod DNA AcHobo 3639 4028 -3 1434 218 54 20 chr2 140910864 140911272 -109776582 + MLT1C LTR MaLR 1 422 -45 1857 177 11 14 chr2 140912898 140913260 -109774594 - MLT1A1 LTR MaLR -4 361 1 389 303 105 35 chr2 140913272 140913500 -109774354 - MIR SINE MIR 0 262 19 262 327 46 33 chr2 140914170 140914222 -109773632 - MIR SINE MIR -95 167 117 1376 186 69 11 chr2 140914222 140914496 -109773358 + AluJo SINE Alu 4 293 -19 262 327 46 33 chr2 140914496 140914596 -109773258 - MIR SINE MIR -145 117 13 234 292 0 15 chr2 140914988 140915053 -109772801 + GA-rich Low_complexity Low_complexity 1 64 0 1420 70 15 15 chr2 140915194 140915394 -109772460 + L1PA10 LINE L1 5960 6159 -9 221 367 10 10 chr2 140915885 140915983 -109771871 + L2 LINE L2 2175 2272 -1042 233 237 140 21 chr2 140916262 140916355 -109771499 - MLT1H LTR MaLR -387 162 59 1041 343 38 48 chr2 140916415 140917211 -109770643 + L2 LINE L2 2263 3047 -225 453 241 171 19 chr2 140917477 140917635 -109770219 - LTR33A LTR ERVL -341 182 1 229 344 180 0 chr2 140917673 140917801 -109770053 + L2 LINE L2 3122 3272 0 360 0 0 0 chr2 140918003 140918043 -109769811 + (CA)n Simple_repeat Simple_repeat 1 40 0 2635 229 98 67 chr2 140918781 140919965 -109767889 - MER69B DNA AcHobo 0 1226 6 304 179 26 13 chr2 140920238 140920316 -109767538 + CT-rich Low_complexity Low_complexity 3 81 0 1418 145 9 18 chr2 140920328 140920555 -109767299 - AluSg/x SINE Alu -2 310 86 2077 119 0 7 chr2 140920668 140920971 -109766883 + AluSq SINE Alu 1 301 -12 390 277 116 7 chr2 140920981 140921136 -109766718 - MIR SINE MIR -56 206 35 198 285 164 62 chr2 140921782 140921856 -109765998 + L2 LINE L2 1368 1433 -1881 2958 158 38 116 chr2 140921856 140922652 -109765202 + MER50 LTR ERV1 1 734 0 198 285 164 62 chr2 140922652 140922851 -109765003 + L2 LINE L2 1433 1669 -1645 516 250 60 30 chr2 140922856 140923056 -109764798 - HAL1 LINE L1 0 2507 2302 2445 258 53 28 chr2 140923152 140924876 -109762978 + L1MEc LINE L1 1743 3464 -2751 1873 252 96 61 chr2 140924899 140925479 -109762375 + L1ME LINE L1 986 1544 -4838 264 91 0 0 chr2 140925479 140925523 -109762331 + (CAAAA)n Simple_repeat Simple_repeat 4 47 0 1873 252 96 61 chr2 140925523 140925882 -109761972 + L1ME LINE L1 1544 1889 -4493 2319 76 3 13 chr2 140925882 140926185 -109761669 + AluY SINE Alu 1 300 -11 1873 252 96 61 chr2 140926185 140927481 -109760373 + L1ME LINE L1 1889 3344 -3038 793 270 81 24 chr2 140927860 140927959 -109759895 + L2 LINE L2 2960 3052 -261 2030 154 103 25 chr2 140927959 140928356 -109759498 + MSTA LTR MaLR 1 428 0 793 270 81 24 chr2 140928356 140928589 -109759265 + L2 LINE L2 3052 3311 -2 21 57 0 0 chr2 140928702 140928737 -109759117 + AT_rich Low_complexity Low_complexity 1 35 0 805 241 42 5 chr2 140928803 140929019 -109758835 - MER58A DNA MER1_type 0 224 1 1781 161 0 25 chr2 140929137 140929423 -109758431 - AluJb SINE Alu -33 279 1 271 339 0 8 chr2 140930513 140930634 -109757220 - MLT1L LTR MaLR 0 615 496 2363 145 12 5 chr2 140930742 140931142 -109756712 - MER57A LTR ERV1 0 403 1 633 246 79 35 chr2 140931611 140931839 -109756015 - L1ME LINE L1 -379 5742 5505 754 148 0 0 chr2 140932709 140932831 -109755023 + LTR26E LTR ERV1 1 122 -500 1016 172 0 6 chr2 140932832 140932989 -109754865 + AluJb SINE Alu 1 156 -156 2318 157 60 9 chr2 140933024 140933489 -109754365 + LTR26E LTR ERV1 134 622 0 1431 231 124 20 chr2 140934027 140934175 -109753679 + L1MC4 LINE L1 6443 6574 -1323 1354 5 29 0 chr2 140934175 140934379 -109753475 + (TAGA)n Simple_repeat Simple_repeat 1 210 0 1431 231 124 20 chr2 140934379 140934827 -109753027 + L1MC4 LINE L1 6574 7161 -736 2182 115 0 0 chr2 140934995 140935283 -109752571 - AluSc SINE Alu -16 293 6 342 341 85 11 chr2 140935817 140935993 -109751861 + MIR3 SINE MIR 19 207 -1 1094 317 128 29 chr2 140935994 140936720 -109751134 + L2 LINE L2 2107 2904 -410 682 276 17 0 chr2 140936732 140936913 -109750941 + MLT1J2 LTR MaLR 8 191 -259 1713 162 8 0 chr2 140937093 140937359 -109750495 - AluSx SINE Alu -44 268 1 667 172 83 19 chr2 140937372 140937529 -109750325 - THE1B LTR MaLR -197 167 1 674 127 9 0 chr2 140937531 140937641 -109750213 - LTR35 LTR ERV1 -507 111 1 2559 126 18 2 chr2 140937917 140938314 -109749540 + MER57A LTR ERV1 1 403 0 581 238 40 26 chr2 140939047 140939159 -109748695 - MER5B DNA MER1_type -25 153 37 1665 180 26 4 chr2 140939159 140939431 -109748423 + AluJb SINE Alu 1 278 -34 581 238 40 26 chr2 140939431 140939469 -109748385 - MER5B DNA MER1_type -141 37 1 490 224 58 54 chr2 140941116 140941375 -109746479 - L1ME4a LINE L1 -9 6112 5853 215 361 59 36 chr2 140941394 140941613 -109746241 + L2 LINE L2 2550 2773 -541 443 277 53 53 chr2 140941711 140941837 -109746017 + MER5A DNA MER1_type 1 129 -60 2114 118 3 0 chr2 140941837 140942133 -109745721 - AluSx SINE Alu -15 297 1 443 277 53 53 chr2 140942133 140942194 -109745660 + MER5A DNA MER1_type 128 188 -1 296 321 18 64 chr2 140942229 140942447 -109745407 - MIR SINE MIR -42 220 13 972 259 159 11 chr2 140942615 140942966 -109744888 + LTR16C LTR ERVL 88 490 -1 268 222 0 19 chr2 140943228 140943282 -109744572 - MER96B DNA MER1_type? -175 242 190 630 235 57 57 chr2 140943549 140943779 -109744075 + MER96B DNA MER1_type? 188 417 0 230 326 0 22 chr2 140944194 140944286 -109743568 + MIR SINE MIR 173 262 0 1897 162 44 22 chr2 140944484 140944848 -109743006 - THE1C LTR MaLR -3 372 1 1799 166 7 13 chr2 140945114 140945415 -109742439 - AluJb SINE Alu -13 299 1 2570 257 41 20 chr2 140945875 140946782 -109741072 + L1ME1 LINE L1 4316 5244 -902 2031 163 0 0 chr2 140946782 140947089 -109740765 + AluJb SINE Alu 1 307 -5 2570 257 41 20 chr2 140947089 140947112 -109740742 + L1ME1 LINE L1 5244 5265 -881 2495 206 19 17 chr2 140947123 140947648 -109740206 + MER82 DNA MER2_type 1 526 -127 532 266 0 0 chr2 140947762 140947875 -109739979 + MER82 DNA MER2_type 534 646 -7 723 223 46 15 chr2 140947883 140948080 -109739774 + L1ME1 LINE L1 5281 5483 -683 3147 187 47 21 chr2 140948086 140948982 -109738872 + L1MB5 LINE L1 5184 6157 -17 2045 217 27 65 chr2 140948999 140949599 -109738255 + L1ME1 LINE L1 5474 6050 -116 232 250 13 79 chr2 140949623 140949699 -109738155 - L2 LINE L2 -3 3269 3199 740 298 9 18 chr2 140949736 140949964 -109737890 - MIR SINE MIR -17 245 20 449 236 31 8 chr2 140949964 140950091 -109737763 + L1MA10 LINE L1 6201 6330 -4 2230 105 0 3 chr2 140950383 140950679 -109737175 + AluSg SINE Alu 1 295 -15 497 257 114 6 chr2 140950783 140950958 -109736896 + MER5C DNA MER1_type 31 224 -100 452 307 116 42 chr2 140951173 140951388 -109736466 + MIR SINE MIR 16 246 -16 21 0 0 0 chr2 140951388 140951409 -109736445 + AT_rich Low_complexity Low_complexity 1 21 0 282 321 38 85 chr2 140951612 140951952 -109735902 + L2 LINE L2 2956 3279 -34 381 210 17 76 chr2 140951959 140952078 -109735776 + MER5C DNA MER1_type 213 324 0 182 254 58 123 chr2 140952089 140952227 -109735627 - MIR SINE MIR -113 149 21 241 296 26 26 chr2 140953239 140953354 -109734500 + MER5A DNA MER1_type 7 121 -68 2253 81 0 53 chr2 140953390 140953710 -109734144 - AluY SINE Alu -8 303 1 224 222 333 11 chr2 140953714 140953804 -109734050 - MER5B DNA MER1_type 0 178 60 206 238 0 0 chr2 140953821 140953863 -109733991 + (CA)n Simple_repeat Simple_repeat 2 43 0 2060 168 3 8 chr2 140953933 140954321 -109733533 + L1MB3 LINE L1 5796 6181 -2 661 236 5 51 chr2 140954347 140954563 -109733291 + L2 LINE L2 2938 3143 -170 207 273 0 45 chr2 140955694 140955760 -109732094 + MIR SINE MIR 78 140 -122 693 241 72 51 chr2 140956291 140956528 -109731326 + MIR SINE MIR 2 243 -19 910 308 59 25 chr2 140956764 140957237 -109730617 + L2 LINE L2 2717 3217 -96 2211 110 7 0 chr2 140957237 140957537 -109730317 + AluSq SINE Alu 1 302 -11 910 308 59 25 chr2 140957537 140957638 -109730216 + L2 LINE L2 3217 3313 0 432 0 0 0 chr2 140958337 140958385 -109729469 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 243 0 0 0 chr2 140958881 140958908 -109728946 + (T)n Simple_repeat Simple_repeat 1 27 0 2873 159 22 71 chr2 140960062 140960223 -109727631 - MER44D DNA MER2_type -1883 604 437 1912 84 21 14 chr2 140960223 140960508 -109727346 + L1PA10 LINE L1 5879 6165 -3 2873 159 22 71 chr2 140960508 140960923 -109726931 - MER44D DNA MER2_type -2050 437 1 272 261 0 0 chr2 140960930 140960999 -109726855 - MER116 DNA Mariner -8 72 4 370 322 75 34 chr2 140961079 140961346 -109726508 - L1MC4a LINE L1 -1795 6013 5736 1241 278 55 22 chr2 140961391 140961848 -109726006 - L1MC4a LINE L1 -2083 5725 5254 632 304 104 37 chr2 140961861 140962531 -109725323 - L1MC4a LINE L1 -906 5240 4488 284 305 58 26 chr2 140962645 140962835 -109725019 - L1MC4a LINE L1 -1772 4374 4179 1102 195 166 29 chr2 140963177 140963283 -109724571 - L1MC4 LINE L1 -178 7864 7774 1880 208 141 13 chr2 140963283 140963744 -109724110 - MLT2B1 LTR ERVL 0 520 1 1102 195 166 29 chr2 140963744 140963980 -109723874 - L1MC4 LINE L1 -268 7774 7475 2093 227 48 85 chr2 140963992 140964563 -109723291 - L1M4 LINE L1 -744 5402 4882 879 194 6 6 chr2 140964563 140964738 -109723116 - L1MB5 LINE L1 -9 6165 5991 2093 227 48 85 chr2 140964738 140965154 -109722700 - L1M4 LINE L1 -1264 4882 4452 922 265 70 13 chr2 140965147 140965604 -109722250 - L1M4 LINE L1 -2600 3546 3064 * 302 204 174 31 chr2 140965599 140965697 -109722157 - L1M4 LINE L1 -3384 2762 2651 * 522 0 0 0 chr2 140965978 140966036 -109721818 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 1999 109 0 0 chr2 140966042 140966309 -109721545 - AluSg SINE Alu -43 267 1 192 189 40 0 chr2 140966387 140966461 -109721393 + (TA)n Simple_repeat Simple_repeat 1 77 0 2219 113 0 0 chr2 140967144 140967437 -109720417 + AluSc SINE Alu 4 296 -13 363 286 138 54 chr2 140968933 140969292 -109718562 + L1MC4a LINE L1 5532 5801 -320 571 291 153 25 chr2 140969549 140969752 -109718102 + MIR SINE MIR 8 236 -26 23 0 0 0 chr2 140969790 140969813 -109718041 + AT_rich Low_complexity Low_complexity 1 23 0 241 344 0 0 chr2 140970032 140970096 -109717758 + Zaphod DNA AcHobo 1 64 -3967 1512 202 37 109 chr2 140970158 140970697 -109717157 + Zaphod DNA AcHobo 273 772 -3259 1661 111 30 15 chr2 140970721 140970992 -109716862 - L1MA5A LINE L1 -5 6292 6018 938 233 121 72 chr2 140971000 140971597 -109716257 + Zaphod DNA AcHobo 2411 3036 -995 846 184 19 6 chr2 140971716 140971874 -109715980 + MSTD LTR MaLR 237 396 0 189 0 0 0 chr2 140972691 140972712 -109715142 + (A)n Simple_repeat Simple_repeat 1 21 0 181 309 24 0 chr2 140972773 140972815 -109715039 + L3b LINE CR1 1524 1566 -17 303 28 0 0 chr2 140975931 140975967 -109711887 + (GA)n Simple_repeat Simple_repeat 1 36 0 1399 199 57 14 chr2 140977449 140977815 -109710039 + L1M4 LINE L1 2345 2726 -3420 297 352 138 6 chr2 140977845 140978004 -109709850 + L3 LINE CR1 481 660 -917 459 266 119 0 chr2 140978160 140978303 -109709551 + L1MC/D LINE L1 5400 5559 -2249 180 0 0 0 chr2 140978521 140978541 -109709313 + (A)n Simple_repeat Simple_repeat 1 20 0 22 106 0 0 chr2 140979080 140979165 -109708689 + AT_rich Low_complexity Low_complexity 1 85 0 2072 120 0 0 chr2 140979515 140979826 -109708028 + AluSx SINE Alu 1 311 0 239 296 182 40 chr2 140979929 140980105 -109707749 - MIR SINE MIR -42 220 20 240 287 87 33 chr2 140980137 140980293 -109707561 - MIR SINE MIR -22 186 20 935 226 86 104 chr2 140980933 140981042 -109706812 + L1M4 LINE L1 24 133 -6409 2460 58 0 19 chr2 140981042 140981351 -109706503 + AluY SINE Alu 1 303 -8 935 226 86 104 chr2 140981351 140981892 -109705962 + L1M4 LINE L1 133 662 -5880 26732 55 4 1 chr2 140981898 140985291 -109702563 + L1P LINE L1 1 3405 -2741 840 213 6 0 chr2 140985397 140985561 -109702293 - MSTD LTR MaLR -231 165 1 2438 73 0 0 chr2 140987092 140987392 -109700462 + AluY SINE Alu 1 300 -11 266 305 30 53 chr2 140987392 140987523 -109700331 + MIR3 SINE MIR 40 167 -41 331 164 0 0 chr2 140987863 140987918 -109699936 - MLT1F1 LTR MaLR -6 561 507 2104 133 0 7 chr2 140988094 140988402 -109699452 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr2 140991574 140991595 -109696259 + AT_rich Low_complexity Low_complexity 1 21 0 286 143 0 43 chr2 140991707 140991777 -109696077 + (TATG)n Simple_repeat Simple_repeat 2 68 0 426 170 89 18 chr2 140991785 140991897 -109695957 + L1MD1 LINE L1 6123 6242 0 1015 127 12 18 chr2 140991981 140992146 -109695708 - L1PA16 LINE L1 -53 6113 5950 423 141 0 13 chr2 140992146 140992224 -109695630 + L1PA16 LINE L1 6090 6166 0 2509 212 99 64 chr2 140992224 140992720 -109695134 + L1ME1 LINE L1 4456 4933 -1233 2209 123 3 0 chr2 140992720 140993021 -109694833 + AluSx SINE Alu 1 302 -10 2509 212 99 64 chr2 140993021 140993413 -109694441 + L1ME1 LINE L1 4933 5310 -856 1698 175 10 24 chr2 140993413 140993704 -109694150 + AluJb SINE Alu 1 287 -25 2509 212 99 64 chr2 140993704 140994474 -109693380 + L1ME1 LINE L1 5310 6161 -5 21 57 0 0 chr2 140994803 140994838 -109693016 + AT_rich Low_complexity Low_complexity 1 35 0 2320 84 0 3 chr2 140995953 140996251 -109691603 - AluY SINE Alu -14 297 1 834 345 55 36 chr2 140996576 140997049 -109690805 + L2 LINE L2 2408 2889 -425 869 142 15 0 chr2 140997085 140997219 -109690635 - AluJo SINE Alu -176 136 1 313 321 84 104 chr2 140997281 140997589 -109690265 + L2 LINE L2 2971 3272 0 228 35 0 0 chr2 140998125 140998154 -109689700 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 689 275 131 13 chr2 140998154 140998452 -109689402 - L2 LINE L2 -34 3279 2947 322 283 62 90 chr2 140998482 140998726 -109689128 - MLT1J2 LTR MaLR -4 446 210 663 118 32 31 chr2 140998727 140998873 -109688981 - LTR10A LTR ERV1 0 609 422 254 311 199 39 chr2 140999205 140999739 -109688115 - L2 LINE L2 -553 2761 2143 24 32 0 0 chr2 141002682 141002713 -109685141 + AT_rich Low_complexity Low_complexity 1 31 0 267 114 0 0 chr2 141003147 141003191 -109684663 + (TG)n Simple_repeat Simple_repeat 2 45 0 23 33 0 0 chr2 141003414 141003444 -109684410 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 141004047 141004071 -109683783 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr2 141006107 141006130 -109681724 + (A)n Simple_repeat Simple_repeat 1 23 0 1714 70 1 3 chr2 141007148 141007397 -109680457 - L1P LINE L1 -1253 4893 4648 705 169 32 0 chr2 141009538 141009662 -109678192 + MLT2C1 LTR ERVL 1 128 -269 303 244 281 0 chr2 141010021 141010156 -109677698 - MIR SINE MIR -51 211 39 21 36 0 0 chr2 141010418 141010446 -109677408 + AT_rich Low_complexity Low_complexity 1 28 0 1427 214 82 24 chr2 141010647 141010988 -109676866 - MLT1-int LTR MaLR -393 978 618 1277 193 14 45 chr2 141010989 141011279 -109676575 + MLT2C1 LTR ERVL 114 394 -3 1450 141 4 28 chr2 141011369 141011617 -109676237 - Tigger5 DNA MER2_type -1 2322 2081 409 235 0 0 chr2 141011607 141011688 -109676166 - Tigger5 DNA MER2_type -2241 82 2 * 235 312 88 41 chr2 141011783 141011953 -109675901 + L2 LINE L2 3136 3313 0 7467 32 17 0 chr2 141012470 141014115 -109673739 - L1PA5 LINE L1 -1 6153 4495 1868 144 11 4 chr2 141014119 141014397 -109673457 - AluSx SINE Alu -30 282 3 272 286 126 17 chr2 141014802 141014921 -109672933 + L2 LINE L2 3179 3310 -3 265 296 148 42 chr2 141016002 141016407 -109671447 + L2 LINE L2 2359 2806 -508 508 330 102 27 chr2 141016618 141017021 -109670833 - L2 LINE L2 -3 3310 2878 1113 237 43 74 chr2 141017539 141017889 -109669965 + MLT1H1 LTR MaLR 185 523 -32 793 181 14 0 chr2 141018546 141018684 -109669170 + AluSg/x SINE Alu 167 306 -6 997 163 44 0 chr2 141018685 141018845 -109669009 + AluJo/FRAM SINE Alu 130 296 -16 2101 119 50 105 chr2 141018855 141019058 -109668796 + L1MA4A LINE L1 5853 6066 -237 732 159 8 15 chr2 141019058 141019190 -109668664 + FLAM_C SINE Alu 3 133 0 2101 119 50 105 chr2 141019190 141019463 -109668391 + L1MA4A LINE L1 6066 6303 0 211 77 96 0 chr2 141120261 141120313 -109567541 + (TA)n Simple_repeat Simple_repeat 1 57 0 370 88 106 0 chr2 141120325 141120485 -109567369 + (TA)n Simple_repeat Simple_repeat 1 177 0 2192 109 7 0 chr2 141120485 141120769 -109567085 - AluSp SINE Alu -27 286 1 343 140 9 122 chr2 141120770 141120877 -109566977 - L2 LINE L2 -769 2545 2451 240 211 88 0 chr2 141120879 141120936 -109566918 + MIR3 SINE MIR 146 207 -1 2927 137 12 2 chr2 141121232 141121713 -109566141 - LTR19A LTR ERV1 0 486 1 22 70 0 0 chr2 141122080 141122123 -109565731 + AT_rich Low_complexity Low_complexity 1 43 0 234 237 136 58 chr2 141122237 141122340 -109565514 + MER5A DNA MER1_type 16 131 -58 944 264 50 18 chr2 141123469 141123851 -109564003 - MER20B DNA MER1_type -369 414 21 557 255 5 115 chr2 141124020 141124229 -109563625 + MIR3 SINE MIR 3 193 -62 196 256 0 0 chr2 141124681 141124720 -109563134 - MER5B DNA MER1_type 0 178 140 366 294 105 0 chr2 141126345 141126467 -109561387 + MIR SINE MIR 25 150 -58 186 265 44 15 chr2 141126558 141126626 -109561228 - L2 LINE L2 0 3272 3203 205 334 97 43 chr2 141126762 141127058 -109560796 - L2 LINE L2 -252 3020 2714 279 308 205 15 chr2 141127166 141127361 -109560493 + MIR SINE MIR 31 262 0 3462 220 16 8 chr2 141129980 141130776 -109557078 + Charlie1 DNA MER1_type 1649 2451 -310 2371 97 0 7 chr2 141130782 141131090 -109556764 - AluSg SINE Alu -4 306 1 1985 152 22 30 chr2 141135038 141135406 -109552448 + MLT1A1 LTR MaLR 1 365 0 2551 69 25 116 chr2 141135426 141135579 -109552275 - L1PA11 LINE L1 -4 6170 6005 2058 141 23 0 chr2 141135579 141135883 -109551971 - AluSx SINE Alu -1 311 1 2551 69 25 116 chr2 141135883 141136177 -109551677 - L1PA11 LINE L1 -169 6005 5764 642 232 55 0 chr2 141136903 141137067 -109550787 + MER5B DNA MER1_type 3 175 -3 223 325 135 1 chr2 141137121 141137251 -109550603 + MIR SINE MIR 28 170 -51 390 286 93 61 chr2 141138298 141138609 -109549245 + L1ME LINE L1 4497 4817 -1329 252 279 30 28 chr2 141138979 141139172 -109548682 + L1ME LINE L1 5265 5453 -724 284 198 55 44 chr2 141139344 141139435 -109548419 + L1ME LINE L1 5773 5864 -257 751 324 70 30 chr2 141139774 141140243 -109547611 - L2 LINE L2 -18 3295 2808 3701 268 106 52 chr2 141141960 141143965 -109543889 - L2 LINE L2 0 3313 1201 220 263 18 0 chr2 141144006 141144063 -109543791 + L2 LINE L2 3187 3244 -28 559 318 86 68 chr2 141144074 141144658 -109543196 + L2 LINE L2 2640 3271 -1 324 64 0 0 chr2 141144947 141144994 -109542860 + (TA)n Simple_repeat Simple_repeat 2 48 0 1100 280 116 25 chr2 141144997 141145608 -109542246 + L2 LINE L2 2224 3087 -226 986 208 10 30 chr2 141145838 141146035 -109541819 + MER58A DNA MER1_type 3 195 -29 2117 122 0 3 chr2 141146911 141147197 -109540657 - AluSx SINE Alu -27 285 1 534 217 9 0 chr2 141147948 141148054 -109539800 + MER3 DNA MER1_type 40 146 -63 224 281 41 123 chr2 141150016 141150117 -109537737 - L2 LINE L2 -182 3090 3007 2062 134 3 3 chr2 141150117 141150408 -109537446 + AluSc SINE Alu 3 293 -16 224 281 41 123 chr2 141150408 141150477 -109537377 - L2 LINE L2 -265 3007 2934 1919 145 41 26 chr2 141150597 141150875 -109536979 + MER46B DNA MER2_type 1 273 -2458 2235 145 28 14 chr2 141150875 141151234 -109536620 + THE1B LTR MaLR 1 364 0 11141 104 10 3 chr2 141151234 141152803 -109535051 + THE1B-int LTR MaLR 1 1580 0 2120 154 34 17 chr2 141152803 141153161 -109534693 + THE1B LTR MaLR 1 364 0 1919 145 41 26 chr2 141153161 141153179 -109534675 + MER46B DNA MER2_type 273 183 -2548 2341 68 0 0 chr2 141153179 141153457 -109534397 - AluY SINE Alu -10 301 24 1919 145 41 26 chr2 141153457 141153502 -109534352 + MER46B DNA MER2_type 182 225 -11 1074 179 0 35 chr2 141154441 141154642 -109533212 - AluJb SINE Alu -15 297 104 2843 13 0 0 chr2 141154645 141154956 -109532898 - AluYa5 SINE Alu 0 311 1 295 294 108 20 chr2 141155046 141155148 -109532706 + MLT1I LTR MaLR 33 143 -266 23 0 0 0 chr2 141155504 141155527 -109532327 + AT_rich Low_complexity Low_complexity 1 23 0 218 315 0 27 chr2 141156564 141156637 -109531217 - MIR3 SINE MIR -8 200 130 27 73 0 0 chr2 141157099 141157154 -109530700 + AT_rich Low_complexity Low_complexity 1 55 0 701 177 28 0 chr2 141157267 141157408 -109530446 - L1PA16 LINE L1 -1 6165 6021 2743 299 87 14 chr2 141157509 141158548 -109529306 - L2 LINE L2 -2017 1297 183 2138 134 0 0 chr2 141159877 141160176 -109527678 - AluSg SINE Alu -11 299 1 255 243 33 127 chr2 141160406 141160588 -109527266 + MIR SINE MIR 8 167 -78 2024 155 0 3 chr2 141163019 141163328 -109524526 + AluSx SINE Alu 1 308 -4 237 33 0 0 chr2 141163502 141163532 -109524322 + (TG)n Simple_repeat Simple_repeat 2 31 0 383 264 76 46 chr2 141163829 141164026 -109523828 + MIR SINE MIR 60 262 0 244 321 128 9 chr2 141164170 141164279 -109523575 - MER5A DNA MER1_type -28 161 40 218 336 112 15 chr2 141164173 141164307 -109523547 + MER5A DNA MER1_type 43 189 0 * 957 289 106 26 chr2 141164742 141165157 -109522697 - MLT1J LTR MaLR -62 449 2 619 312 26 41 chr2 141165572 141165838 -109522016 + MIR SINE MIR 1 262 0 301 318 14 0 chr2 141167408 141167505 -109520349 + MIR SINE MIR 67 167 -41 812 319 139 11 chr2 141167858 141168174 -109519680 + L2 LINE L2 2876 3251 -62 197 65 32 0 chr2 141168174 141168205 -109519649 + (TTG)n Simple_repeat Simple_repeat 3 34 0 812 319 139 11 chr2 141168205 141168270 -109519584 + L2 LINE L2 3251 3306 -7 577 336 26 13 chr2 141168738 141168967 -109518887 - MIR SINE MIR 0 262 31 254 327 75 28 chr2 141169506 141169613 -109518241 - L2 LINE L2 0 3272 3161 30 45 0 0 chr2 141170479 141170523 -109517331 + AT_rich Low_complexity Low_complexity 1 44 0 1260 312 96 13 chr2 141172041 141172514 -109515340 - L2 LINE L2 -40 3273 2841 596 234 18 83 chr2 141172514 141172732 -109515122 + MER3 DNA MER1_type 5 208 -1 1260 312 96 13 chr2 141172732 141173234 -109514620 - L2 LINE L2 -472 2841 2207 355 343 78 10 chr2 141173414 141173618 -109514236 + MIR SINE MIR 35 252 -10 685 263 136 9 chr2 141173766 141173979 -109513875 + MIR SINE MIR 2 241 -21 324 70 0 0 chr2 141175277 141175320 -109512534 + (TG)n Simple_repeat Simple_repeat 2 44 0 3121 146 38 3 chr2 141176356 141177240 -109510614 - L1PA14 LINE L1 -517 5644 4732 3588 105 8 0 chr2 141177242 141177766 -109510088 + L1PA14 LINE L1 5631 6158 -3 32 26 0 0 chr2 141178402 141178441 -109509413 + AT_rich Low_complexity Low_complexity 1 39 0 213 224 12 47 chr2 141181712 141181797 -109506057 + (CAGAGA)n Simple_repeat Simple_repeat 2 83 0 408 339 70 47 chr2 141181807 141182208 -109505646 - L2 LINE L2 -1668 1646 1237 2385 11 0 0 chr2 141182506 141182777 -109505077 - L1PA3 LINE L1 0 6155 5885 1753 189 3 3 chr2 141183009 141183305 -109504549 + AluJo SINE Alu 3 298 -14 1041 195 28 138 chr2 141184016 141184391 -109503463 + MER58B DNA MER1_type 1 331 -10 448 233 17 52 chr2 141185076 141185248 -109502606 - MER104 DNA Tc2 0 180 15 186 355 53 32 chr2 141185476 141185665 -109502189 - L2 LINE L2 -228 3044 2852 624 287 68 21 chr2 141185713 141185950 -109501904 + MIR SINE MIR 12 259 -3 348 238 69 10 chr2 141186469 141186570 -109501284 - MIR SINE MIR -15 247 141 272 203 68 0 chr2 141187281 141187340 -109500514 - MER94 DNA DNA 0 134 72 28 0 0 0 chr2 141187484 141187512 -109500342 + AT_rich Low_complexity Low_complexity 1 28 0 26157 138 21 10 chr2 141187598 141192734 -109495120 - L1PA8A LINE L1 -4 6442 1161 210 91 0 0 chr2 141192734 141192767 -109495087 + (TTG)n Simple_repeat Simple_repeat 1 33 0 26157 138 21 10 chr2 141192767 141193938 -109493916 - L1PA8A LINE L1 -5285 1161 4 324 273 16 0 chr2 141193977 141194105 -109493749 + (TA)n Simple_repeat Simple_repeat 2 131 0 4457 166 66 48 chr2 141194106 141195015 -109492839 + MER21A LTR ERV1 1 925 -6 188 182 0 36 chr2 141195020 141195075 -109492779 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 21 0 0 0 chr2 141195161 141195182 -109492672 + AT_rich Low_complexity Low_complexity 1 21 0 5627 181 21 18 chr2 141195182 141196828 -109491026 + L1MC1 LINE L1 4668 6316 -17 2254 108 7 0 chr2 141196863 141197160 -109490694 - AluSx SINE Alu -13 299 1 362 332 88 34 chr2 141197356 141197561 -109490293 + L2 LINE L2 2537 2752 -562 197 250 13 53 chr2 141197710 141197786 -109490068 + L2 LINE L2 2933 3005 -267 300 217 122 26 chr2 141197811 141197926 -109489928 - MER117 DNA MER1_type -71 126 1 243 0 0 0 chr2 141198122 141198149 -109489705 + (A)n Simple_repeat Simple_repeat 1 27 0 30 83 0 0 chr2 141198982 141199054 -109488800 + AT_rich Low_complexity Low_complexity 1 72 0 1438 171 194 78 chr2 141199087 141199550 -109488304 + MLT2B1 LTR ERVL 1 517 -3 665 96 11 0 chr2 141199750 141199874 -109487980 - AluSg/x SINE Alu 0 311 187 21 71 0 0 chr2 141200947 141200989 -109486865 + AT_rich Low_complexity Low_complexity 1 42 0 526 350 11 4 chr2 141201252 141201512 -109486342 + L1ME LINE L1 5371 5632 -530 1515 209 33 42 chr2 141201772 141202291 -109485563 + MER34B LTR ERV1 1 565 0 341 323 85 42 chr2 141202718 141202907 -109484947 + MIR SINE MIR 47 243 -19 1989 117 18 0 chr2 141203601 141203882 -109483972 + AluSx SINE Alu 1 286 -26 339 274 46 46 chr2 141203973 141204126 -109483728 + MIR SINE MIR 109 261 -1 * 404 257 57 9 chr2 141204124 141204229 -109483625 - L2 LINE L2 0 3313 3204 2288 81 3 10 chr2 141205415 141205712 -109482142 + AluY SINE Alu 3 297 -14 31 58 0 0 chr2 141206142 141206194 -109481660 + AT_rich Low_complexity Low_complexity 1 52 0 2112 53 68 0 chr2 141206198 141206485 -109481369 + AluY SINE Alu 1 305 0 398 182 41 29 chr2 141206507 141206677 -109481177 + (TA)n Simple_repeat Simple_repeat 2 173 0 395 160 28 52 chr2 141206688 141207048 -109480806 + (TTATA)n Simple_repeat Simple_repeat 1 351 0 333 163 28 67 chr2 141207059 141207237 -109480617 + (TTATA)n Simple_repeat Simple_repeat 2 172 0 377 152 5 68 chr2 141207255 141207446 -109480408 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 30 27 0 0 chr2 141208168 141208205 -109479649 + AT_rich Low_complexity Low_complexity 1 37 0 253 273 139 58 chr2 141209369 141209487 -109478367 - L3 LINE CR1 -64 1513 1375 2254 101 3 0 chr2 141209487 141209794 -109478060 - AluSx SINE Alu -4 308 1 253 273 139 58 chr2 141209794 141209847 -109478007 - L3 LINE CR1 -202 1375 1328 1250 233 93 28 chr2 141210239 141210668 -109477186 + MER4C LTR ERV1 1 457 -8 191 299 78 13 chr2 141210750 141210827 -109477027 + MIR3 SINE MIR 104 185 -23 2240 109 3 6 chr2 141213374 141213686 -109474168 + AluSx SINE Alu 2 312 0 28 48 0 0 chr2 141213897 141213939 -109473915 + AT_rich Low_complexity Low_complexity 1 42 0 290 247 59 12 chr2 141214075 141214160 -109473694 - MIR SINE MIR -44 218 130 2076 110 10 7 chr2 141214301 141214591 -109473263 + AluSg SINE Alu 1 291 -19 2612 55 0 0 chr2 141214798 141215139 -109472715 - AluY SINE Alu 0 341 1 211 269 75 15 chr2 141215156 141215223 -109472631 - MER5C DNA MER1_type -251 73 3 195 353 181 19 chr2 141216115 141216894 -109470960 - L2 LINE L2 -712 2602 1698 592 286 61 42 chr2 141217140 141217381 -109470473 + MIR SINE MIR 16 262 0 390 235 34 17 chr2 141217362 141217481 -109470373 - MIR SINE MIR -11 251 131 * 185 338 0 0 chr2 141217484 141217555 -109470299 - MIR SINE MIR 0 262 192 360 321 43 47 chr2 141217624 141217901 -109469953 + HAL1 LINE L1 630 905 -1602 2490 242 171 46 chr2 141217930 141218356 -109469498 + HAL1 LINE L1 993 1364 -1143 1530 198 34 3 chr2 141218356 141218649 -109469205 - AluJo SINE Alu -10 302 1 2490 242 171 46 chr2 141218649 141219565 -109468289 + HAL1 LINE L1 1364 2503 -4 24 0 0 0 chr2 141220149 141220173 -109467681 + AT_rich Low_complexity Low_complexity 1 24 0 329 274 10 20 chr2 141222170 141222272 -109465582 + MIR SINE MIR 125 225 -37 2312 96 0 0 chr2 141222343 141222636 -109465218 - AluSx SINE Alu -19 293 1 384 239 180 24 chr2 141222714 141222881 -109464973 + MIR SINE MIR 32 224 -38 24 0 0 0 chr2 141222885 141222909 -109464945 + AT_rich Low_complexity Low_complexity 1 24 0 840 200 22 11 chr2 141222925 141223105 -109464749 - MER58 DNA MER1_type -2238 182 1 6191 116 10 1 chr2 141223619 141224829 -109463025 - L1PA13 LINE L1 -21 6142 4924 361 294 116 20 chr2 141225556 141225702 -109462152 - MIR SINE MIR -12 250 91 566 369 62 10 chr2 141225767 141226057 -109461797 - L3 LINE CR1 -206 1371 1067 370 188 47 12 chr2 141226161 141226246 -109461608 - MER103 DNA DNA -1 165 78 322 329 106 68 chr2 141226253 141226651 -109461203 - L3 LINE CR1 -1118 459 47 223 320 27 0 chr2 141227807 141227882 -109459972 + L3 LINE CR1 525 601 -976 181 184 0 53 chr2 141227926 141227964 -109459890 - MIR SINE MIR -104 104 69 511 248 40 0 chr2 141228745 141228870 -109458984 + MIR SINE MIR 113 242 -20 240 228 106 41 chr2 141228932 141229055 -109458799 - LTR33A LTR ERVL 0 523 393 301 357 54 0 chr2 141229163 141229292 -109458562 - LTR33A LTR ERVL -319 204 69 313 265 137 8 chr2 141229812 141229929 -109457925 + MIR3 SINE MIR 68 199 -9 207 0 0 0 chr2 141230269 141230292 -109457562 + (TTG)n Simple_repeat Simple_repeat 3 25 0 1410 151 0 54 chr2 141230298 141230557 -109457297 - AluJo SINE Alu -31 281 37 4904 81 22 0 chr2 141231099 141231745 -109456109 + PABL_A LTR ERV1 1 660 0 21 0 0 0 chr2 141232233 141232254 -109455600 + AT_rich Low_complexity Low_complexity 1 21 0 249 291 26 43 chr2 141232631 141232748 -109455106 + L1ME1 LINE L1 5959 6073 -93 752 216 22 41 chr2 141232982 141233218 -109454636 + LTR12 LTR ERV1 239 572 -142 364 126 15 0 chr2 141233250 141233319 -109454535 + L1ME1 LINE L1 6088 6148 -18 228 266 202 0 chr2 141233814 141233923 -109453931 - MIR SINE MIR -65 197 67 4836 109 7 4 chr2 141234048 141234755 -109453099 + L1PB3 LINE L1 5439 6147 -7 2379 100 0 0 chr2 141234795 141235104 -109452750 + AluSx SINE Alu 1 309 -3 333 270 25 66 chr2 141235427 141235623 -109452231 + LTR67 LTR ERVL 362 549 -8 282 287 18 60 chr2 141236040 141236203 -109451651 + MIR SINE MIR 43 198 -64 625 203 0 0 chr2 141236423 141236567 -109451287 - FLAM_C SINE Alu 0 145 2 24 85 0 0 chr2 141237203 141237262 -109450592 + AT_rich Low_complexity Low_complexity 1 59 0 23 86 0 0 chr2 141237279 141237337 -109450517 + AT_rich Low_complexity Low_complexity 1 58 0 1932 180 40 3 chr2 141238714 141239064 -109448790 - MLT1A1 LTR MaLR -2 363 1 237 288 25 0 chr2 141239735 141239853 -109448001 + HAL1 LINE L1 1067 1187 -1320 1239 194 18 4 chr2 141239913 141240140 -109447714 + MLT1D LTR MaLR 272 501 -4 191 115 0 0 chr2 141241858 141241884 -109445970 - MIR SINE MIR -75 187 162 213 357 54 0 chr2 141242126 141242238 -109445616 - MIR SINE MIR -58 150 33 202 244 0 0 chr2 141242973 141243018 -109444836 + T-rich Low_complexity Low_complexity 1 45 0 1902 195 8 6 chr2 141244990 141245354 -109442500 + MLT1A1 LTR MaLR 1 365 0 359 355 53 48 chr2 141246361 141246550 -109441304 - MIR SINE MIR -53 209 20 813 229 167 12 chr2 141248508 141248766 -109439088 + MLT1J1 LTR MaLR 13 310 -136 997 196 15 15 chr2 141248838 141249037 -109438817 + MLT1B LTR MaLR 192 390 0 291 228 35 70 chr2 141249047 141249161 -109438693 + MLT1J1 LTR MaLR 322 431 -15 2418 79 0 0 chr2 141249236 141249541 -109438313 - AluY SINE Alu -6 305 1 850 271 31 22 chr2 141249667 141249784 -109438070 - MIR SINE MIR -20 242 128 4333 112 29 37 chr2 141249784 141250481 -109437373 + LTR8 LTR ERV1 1 691 0 850 271 31 22 chr2 141250481 141250592 -109437262 - MIR SINE MIR -134 128 12 415 319 68 16 chr2 141251270 141251511 -109436343 + MIR SINE MIR 8 261 -1 690 221 29 88 chr2 141251546 141251853 -109436001 + LTR37B LTR ERV1 176 464 -4 307 274 38 28 chr2 141252221 141252327 -109435527 - MLT2E LTR ERVL -490 138 32 2192 92 3 7 chr2 141252860 141253153 -109434701 + AluSc SINE Alu 1 292 -17 27 49 0 0 chr2 141253511 141253552 -109434302 + AT_rich Low_complexity Low_complexity 1 41 0 1277 204 33 83 chr2 141253612 141253975 -109433879 + MLT1A1 LTR MaLR 21 365 0 1003 78 17 22 chr2 141254290 141254469 -109433385 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 1639 186 38 3 chr2 141254471 141254864 -109432990 - AluJo SINE Alu 0 403 1 2144 172 89 5 chr2 141255063 141255155 -109432699 + L1MB2 LINE L1 5686 5769 -402 222 37 0 0 chr2 141255155 141255182 -109432672 + (TA)n Simple_repeat Simple_repeat 2 28 0 2144 172 89 5 chr2 141255182 141255537 -109432317 + L1MB2 LINE L1 5769 6171 0 453 344 38 11 chr2 141256100 141256286 -109431568 + MIR SINE MIR 24 214 -48 1177 236 84 58 chr2 141256920 141257331 -109430523 - MLT1C LTR MaLR 0 467 42 1436 184 23 100 chr2 141257331 141257377 -109430477 + MLT1A1 LTR MaLR 5 53 -312 2187 98 7 3 chr2 141257377 141257674 -109430180 - AluSx SINE Alu -14 298 1 1436 184 23 100 chr2 141257674 141258018 -109429836 + MLT1A1 LTR MaLR 53 365 0 1177 236 84 58 chr2 141258018 141258056 -109429798 - MLT1C LTR MaLR -425 42 6 257 323 73 10 chr2 141258552 141258648 -109429206 - L2 LINE L2 -20 3252 3151 2343 65 3 7 chr2 141258923 141259230 -109428624 + L1PA7 LINE L1 5846 6151 -3 23 33 0 0 chr2 141259309 141259339 -109428515 + AT_rich Low_complexity Low_complexity 1 30 0 198 428 15 15 chr2 141260479 141260610 -109427244 + MIR SINE MIR 18 148 -114 476 317 88 15 chr2 141260632 141260894 -109426960 - LTR33 LTR ERVL -12 509 229 520 296 56 71 chr2 141261330 141261668 -109426186 - LTR33A LTR ERVL -92 431 99 712 163 66 0 chr2 141261843 141262009 -109425845 + Charlie5 DNA MER1_type 2426 2602 -10 333 252 113 13 chr2 141262411 141262570 -109425284 + MIR SINE MIR 82 256 -6 1161 275 40 30 chr2 141262610 141263278 -109424576 - L1ME3 LINE L1 -28 6142 5386 2371 87 3 0 chr2 141263716 141264016 -109423838 + AluSx SINE Alu 1 301 -11 349 179 80 42 chr2 141264760 141264907 -109422947 + MLT1H1 LTR MaLR 434 549 0 309 299 11 0 chr2 141264987 141265074 -109422780 - L2 LINE L2 -3 3310 3223 1570 219 0 3 chr2 141265789 141266076 -109421778 + AluJb SINE Alu 6 291 -21 471 241 81 46 chr2 141267513 141267687 -109420167 + MLT1J LTR MaLR 1 180 -331 225 186 23 0 chr2 141268078 141268121 -109419733 + GA-rich Low_complexity Low_complexity 2 45 0 314 301 63 16 chr2 141268389 141268540 -109419314 + MIR SINE MIR 3 158 -65 1649 177 64 80 chr2 141269582 141270095 -109417759 + MLT1D LTR MaLR 1 505 0 362 195 12 0 chr2 141270481 141270563 -109417291 + CT-rich Low_complexity Low_complexity 3 85 0 249 253 13 0 chr2 141270709 141270788 -109417066 + L1MB7 LINE L1 6105 6184 0 574 200 62 0 chr2 141270968 141271098 -109416756 - L1MD3 LINE L1 -2 7993 7856 1712 301 138 33 chr2 141271487 141272734 -109415120 - L2 LINE L2 0 3313 1868 959 148 12 6 chr2 141272734 141272903 -109414951 - MER65C LTR ERV1 0 461 292 662 204 121 37 chr2 141272917 141273165 -109414689 - MLT1E1 LTR MaLR -352 302 6 842 183 0 0 chr2 141273231 141273417 -109414437 - FRAM SINE Alu 0 201 16 228 86 0 0 chr2 141273644 141273679 -109414175 + (TAA)n Simple_repeat Simple_repeat 3 37 0 299 282 134 7 chr2 141273679 141273821 -109414033 - MIR SINE MIR -15 247 88 269 281 42 141 chr2 141274299 141274491 -109413363 + L2 LINE L2 3007 3179 -93 214 284 12 37 chr2 141276755 141276836 -109411018 - MIR SINE MIR -116 146 68 21 0 0 0 chr2 141277059 141277080 -109410774 + AT_rich Low_complexity Low_complexity 1 21 0 477 292 141 10 chr2 141277937 141278235 -109409619 + L2 LINE L2 1493 1829 -1485 1339 223 234 44 chr2 141278267 141278907 -109408947 - L1MC4 LINE L1 -2 8040 7279 1301 264 108 8 chr2 141278923 141279444 -109408410 + MLT2F LTR ERVL 3 622 -41 392 209 12 0 chr2 141279548 141279634 -109408220 - L1MC4 LINE L1 -811 7231 7145 653 330 107 40 chr2 141279762 141280339 -109407515 + L2 LINE L2 2684 3310 -3 31 26 0 0 chr2 141280490 141280528 -109407326 + AT_rich Low_complexity Low_complexity 1 38 0 862 182 0 28 chr2 141280736 141280879 -109406975 + FRAM SINE Alu 15 153 -23 21 71 0 0 chr2 141282072 141282114 -109405740 + AT_rich Low_complexity Low_complexity 1 42 0 6402 38 1 0 chr2 141283250 141284422 -109403432 - L1PA5 LINE L1 -379 5776 4603 3011 51 0 0 chr2 141284422 141284794 -109403060 + L1PA5 LINE L1 5778 6150 -4 2046 159 67 27 chr2 141285348 141285750 -109402104 + MSTC LTR MaLR 1 418 -10 25 0 0 0 chr2 141286152 141286177 -109401677 + AT_rich Low_complexity Low_complexity 1 25 0 339 43 0 0 chr2 141288864 141288910 -109398944 + MADE1 DNA Mariner 1 46 -34 299 256 94 49 chr2 141289062 141289265 -109398589 - HAL1 LINE L1 -6 2501 2290 1847 163 7 7 chr2 141289281 141289582 -109398272 - AluSx SINE Alu -11 301 1 983 240 67 50 chr2 141289594 141289661 -109398193 - L1ME1 LINE L1 -5 6161 6097 192 77 0 0 chr2 141289661 141289687 -109398167 + (CATATA)n Simple_repeat Simple_repeat 6 31 0 983 240 67 50 chr2 141289687 141290036 -109397818 - L1ME1 LINE L1 -69 6097 5738 1601 189 10 20 chr2 141290055 141290352 -109397502 + AluJo SINE Alu 1 294 -18 873 275 111 70 chr2 141290376 141291359 -109396495 - HAL1 LINE L1 -217 2290 1268 362 174 29 0 chr2 141291470 141291539 -109396315 + MER116 DNA Mariner 10 80 0 810 326 68 39 chr2 141291566 141292082 -109395772 - HAL1 LINE L1 -1551 956 426 231 368 53 0 chr2 141292707 141292840 -109395014 - HAL1 LINE L1 -2367 140 1 249 219 94 42 chr2 141293668 141293764 -109394090 - MER102a DNA MER1_type -9 321 221 200 197 56 14 chr2 141293793 141293864 -109393990 + (TAAA)n Simple_repeat Simple_repeat 4 77 0 1652 171 3 30 chr2 141294011 141294315 -109393539 + AluJo SINE Alu 1 296 -16 1026 134 143 19 chr2 141297784 141298000 -109389854 + MLT1A1 LTR MaLR 123 365 0 228 306 194 8 chr2 141298030 141298154 -109389700 + L2 LINE L2 3159 3305 -8 2164 117 107 52 chr2 141298337 141298738 -109389116 - MER57B LTR ERV1 -10 424 2 347 237 66 53 chr2 141298837 141299084 -109388770 - LTR16A1 LTR ERVL -18 473 168 211 115 39 39 chr2 141299947 141299999 -109387855 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 204 250 33 17 chr2 141301110 141301170 -109386684 + L2 LINE L2 3187 3247 -66 21 0 0 0 chr2 141302071 141302092 -109385762 + AT_rich Low_complexity Low_complexity 1 21 0 252 337 0 0 chr2 141302133 141302219 -109385635 + L1ME2 LINE L1 140 225 -6171 2916 235 41 53 chr2 141302645 141303909 -109383945 + L1ME2 LINE L1 2096 3305 -2910 2097 246 72 75 chr2 141303909 141304019 -109383835 + L1ME2 LINE L1 3541 3650 -2565 1708 189 0 3 chr2 141304019 141304331 -109383523 + AluSx SINE Alu 1 311 -1 2097 246 72 75 chr2 141304331 141305467 -109382387 + L1ME2 LINE L1 3650 4783 -1432 2188 236 56 22 chr2 141305498 141306306 -109381548 + L1ME2 LINE L1 5118 5966 -267 16957 201 27 17 chr2 141306351 141313114 -109374740 + L1PA16 LINE L1 28 6861 -8 654 246 69 10 chr2 141313130 141313333 -109374521 + L1ME2 LINE L1 6000 6214 -19 182 195 0 24 chr2 141313653 141313694 -109374160 - L2 LINE L2 0 3272 3233 5089 168 23 5 chr2 141313709 141314571 -109373283 + MSTA-int LTR MaLR 773 1650 -1 2410 130 79 8 chr2 141314574 141314967 -109372887 + MSTA LTR MaLR 3 423 -5 224 365 146 0 chr2 141314968 141315064 -109372790 - L2 LINE L2 -47 3225 3116 494 344 0 16 chr2 141315194 141315377 -109372477 - MIR SINE MIR -73 189 10 252 297 79 30 chr2 141315393 141315494 -109372360 - L2 LINE L2 -204 3068 2963 1843 122 40 49 chr2 141315640 141315944 -109371910 + AluSg SINE Alu 1 301 -9 235 243 78 39 chr2 141317006 141317109 -109370745 + MIR SINE MIR 16 122 -86 1073 308 63 16 chr2 141318489 141318930 -109368924 - LTR16B LTR ERVL 0 464 3 354 389 45 11 chr2 141320079 141320457 -109367397 - HERV16 LTR ERVL -4567 429 39 855 294 44 4 chr2 141320558 141320833 -109367021 - LTR16C LTR ERVL -78 413 128 327 337 74 21 chr2 141321118 141321226 -109366628 + MIR SINE MIR 20 144 -118 198 0 108 0 chr2 141321226 141321263 -109366591 + T-rich Low_complexity Low_complexity 2 42 0 327 337 74 21 chr2 141321263 141321344 -109366510 + MIR SINE MIR 144 219 -43 1165 325 59 2 chr2 141321478 141321903 -109365951 + LTR33 LTR ERVL 5 453 -68 211 205 0 0 chr2 141322136 141322175 -109365679 + (CA)n Simple_repeat Simple_repeat 2 40 0 307 299 192 34 chr2 141323766 141323943 -109363911 - MIR SINE MIR -53 209 5 2263 101 10 7 chr2 141325876 141326184 -109361670 - AluSx SINE Alu -3 309 1 181 411 22 0 chr2 141326736 141326826 -109361028 + L3b LINE CR1 1384 1475 -108 1645 221 66 46 chr2 141327639 141328141 -109359713 - MLT2B1 LTR ERVL 0 520 9 258 271 19 28 chr2 141328291 141328398 -109359456 + L1ME4a LINE L1 5794 5899 -222 257 231 28 70 chr2 141328434 141328487 -109359367 + L1ME4a LINE L1 5985 6039 -82 1625 167 35 7 chr2 141328487 141328774 -109359080 - AluJo SINE Alu -17 295 1 257 231 28 70 chr2 141328774 141328863 -109358991 + L1ME4a LINE L1 6039 6121 0 352 329 82 48 chr2 141329260 141329652 -109358202 + L2 LINE L2 2825 3229 -84 2728 225 37 43 chr2 141329991 141330411 -109357443 + MER21B LTR ERV1 98 514 -349 441 0 0 0 chr2 141330411 141330460 -109357394 + (CA)n Simple_repeat Simple_repeat 1 49 0 2728 225 37 43 chr2 141330460 141330740 -109357114 + MER21B LTR ERV1 514 794 -69 242 167 0 0 chr2 141331093 141331135 -109356719 + MER21B LTR ERV1 248 289 -574 2083 114 10 10 chr2 141331340 141331647 -109356207 + AluSc SINE Alu 1 307 -2 321 262 168 0 chr2 141331703 141331810 -109356044 + MER117 DNA MER1_type 39 163 -34 180 331 200 0 chr2 141331895 141332040 -109355814 + MIR SINE MIR 77 250 -12 278 25 0 25 chr2 141332229 141332269 -109355585 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 476 280 129 40 chr2 141333914 141334139 -109353715 - MIR SINE MIR -4 258 14 208 290 20 40 chr2 141335024 141335124 -109352730 + MIR3 SINE MIR 74 171 -37 219 245 0 38 chr2 141335355 141335408 -109352446 + L2 LINE L2 2995 3045 -268 2312 155 136 5 chr2 141335534 141335954 -109351900 - MER61D LTR ERV1 -2 499 25 299 213 0 0 chr2 141335921 141335982 -109351872 - LTR28 LTR ERV1 -959 61 1 * 324 247 35 12 chr2 141335990 141336075 -109351779 + L2 LINE L2 3227 3313 0 198 103 0 0 chr2 141336887 141336916 -109350938 + (CA)n Simple_repeat Simple_repeat 2 30 0 2231 88 7 7 chr2 141336979 141337273 -109350581 + AluSq SINE Alu 3 296 -17 213 369 48 0 chr2 141337955 141338039 -109349815 + MIR SINE MIR 48 135 -73 2464 279 56 78 chr2 141338063 141339395 -109348459 + Charlie2b DNA MER1_type 37 1339 -1443 1300 257 71 62 chr2 141339409 141340071 -109347783 + Charlie2b DNA MER1_type 1544 2218 -644 2089 114 24 0 chr2 141340071 141340361 -109347493 - AluSx SINE Alu -15 297 1 1300 257 71 62 chr2 141340361 141340617 -109347237 + Charlie2b DNA MER1_type 2218 2470 -312 3364 43 2 31 chr2 141340619 141341063 -109346791 + L1PA7 LINE L1 5715 6145 -9 21 71 0 0 chr2 141342228 141342270 -109345584 + AT_rich Low_complexity Low_complexity 1 42 0 1404 281 104 32 chr2 141343156 141343338 -109344516 + L2 LINE L2 1963 2131 -1183 222 37 0 0 chr2 141343338 141343365 -109344489 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 1404 281 104 32 chr2 141343365 141343617 -109344237 + L2 LINE L2 2131 2444 -870 525 282 74 0 chr2 141343617 141343780 -109344074 - MER96 DNA MER1_type 0 175 1 1404 281 104 32 chr2 141343780 141343874 -109343980 + L2 LINE L2 2444 2530 -784 22 0 0 0 chr2 141343938 141343960 -109343894 + AT_rich Low_complexity Low_complexity 1 22 0 1574 184 13 3 chr2 141344047 141344363 -109343491 - L1MC2 LINE L1 -2 6342 6024 248 344 43 11 chr2 141344716 141344809 -109343045 + L2 LINE L2 3121 3216 -56 216 243 57 0 chr2 141344855 141344925 -109342929 + GA-rich Low_complexity Low_complexity 1 74 0 22 0 0 0 chr2 141346110 141346132 -109341722 + AT_rich Low_complexity Low_complexity 1 22 0 24 77 0 0 chr2 141348165 141348217 -109339637 + AT_rich Low_complexity Low_complexity 1 52 0 28 86 0 0 chr2 141349351 141349421 -109338433 + AT_rich Low_complexity Low_complexity 1 70 0 29 0 0 0 chr2 141351288 141351317 -109336537 + AT_rich Low_complexity Low_complexity 1 29 0 1323 110 0 40 chr2 141351329 141351557 -109336297 - L1MA5A LINE L1 -3 6294 6076 22 0 0 0 chr2 141351937 141351959 -109335895 + AT_rich Low_complexity Low_complexity 1 22 0 251 293 107 0 chr2 141352481 141352556 -109335298 - L2 LINE L2 -256 3057 2975 228 35 0 0 chr2 141354257 141354286 -109333568 + (TG)n Simple_repeat Simple_repeat 1 29 0 384 315 54 9 chr2 141355133 141355244 -109332610 + MIR SINE MIR 30 145 -63 4909 80 15 0 chr2 141355789 141356437 -109331417 - PABL_A LTR ERV1 -2 658 1 2365 125 31 0 chr2 141356743 141357096 -109330758 + THE1B LTR MaLR 1 364 0 261 361 77 0 chr2 141357645 141357775 -109330079 - MIR3 SINE MIR -1 207 68 25 0 0 0 chr2 141358674 141358699 -109329155 + AT_rich Low_complexity Low_complexity 1 25 0 538 77 26 0 chr2 141358699 141358777 -109329077 + MADE1 DNA Mariner 1 80 0 24 32 0 0 chr2 141359798 141359829 -109328025 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr2 141360081 141360117 -109327737 + AT_rich Low_complexity Low_complexity 1 36 0 462 315 76 26 chr2 141360152 141360509 -109327345 + L1M4 LINE L1 3686 4063 -2083 2031 163 74 10 chr2 141361473 141361879 -109325975 - MSTB1 LTR MaLR 0 432 1 24 100 0 0 chr2 141362374 141362454 -109325400 + AT_rich Low_complexity Low_complexity 1 80 0 700 302 69 21 chr2 141362812 141363100 -109324754 + MLT1I LTR MaLR 108 409 0 2163 95 3 3 chr2 141363694 141363998 -109323856 + AluY SINE Alu 1 304 -7 238 200 33 78 chr2 141364654 141364744 -109323110 - L1ME3 LINE L1 -19 6143 6058 919 254 105 3 chr2 141364768 141365091 -109322763 - L1ME3 LINE L1 -191 5971 5616 523 231 133 29 chr2 141365710 141365883 -109321971 - L1ME3 LINE L1 -578 5586 5396 246 32 0 0 chr2 141365891 141365922 -109321932 + (TG)n Simple_repeat Simple_repeat 1 31 0 1730 219 68 43 chr2 141365960 141366610 -109321244 - L1ME3 LINE L1 -852 5294 4629 2101 113 13 7 chr2 141367144 141367444 -109320410 - AluSg SINE Alu -8 302 1 1577 322 74 32 chr2 141367589 141368679 -109319175 - L2 LINE L2 -8 3305 2174 329 145 16 0 chr2 141369090 141369152 -109318702 + (CA)n Simple_repeat Simple_repeat 2 64 0 717 154 0 0 chr2 141369155 141369272 -109318582 - FLAM_C SINE Alu -26 117 1 4589 177 31 51 chr2 141370115 141371024 -109316830 + MER54A LTR ERVL 10 900 -1 21 0 0 0 chr2 141372020 141372041 -109315813 + AT_rich Low_complexity Low_complexity 1 21 0 235 245 0 19 chr2 141373397 141373450 -109314404 + MIR SINE MIR 81 132 -76 1643 164 32 26 chr2 141374569 141374880 -109312974 - THE1C LTR MaLR -62 313 1 2052 185 99 8 chr2 141375217 141375611 -109312243 + MSTB1 LTR MaLR 3 432 0 1914 220 63 0 chr2 141375717 141376162 -109311692 + MER63 DNA MER1_type 588 1060 0 33 25 0 0 chr2 141376303 141376343 -109311511 + AT_rich Low_complexity Low_complexity 1 40 0 3450 154 43 36 chr2 141376385 141377058 -109310796 - L1MA8 LINE L1 -50 6241 5564 514 196 0 101 chr2 141378083 141378231 -109309623 - L1MB7 LINE L1 -46 6138 6006 4715 179 18 16 chr2 141378283 141379666 -109308188 + L1PB4 LINE L1 4763 6156 0 26 0 0 0 chr2 141379676 141379702 -109308152 + AT_rich Low_complexity Low_complexity 1 26 0 295 284 28 45 chr2 141379703 141379879 -109307975 - L1M4c LINE L1 -4180 2204 2032 518 335 45 10 chr2 141380136 141380336 -109307518 - L2 LINE L2 -350 2964 2758 245 250 26 40 chr2 141380554 141380630 -109307224 + L2 LINE L2 3180 3254 -18 353 120 0 0 chr2 141380647 141380697 -109307157 - MLT1B LTR MaLR -11 379 330 * 546 270 69 23 chr2 141380695 141380869 -109306985 - MER74A LTR ERVL -362 196 15 308 264 0 11 chr2 141380914 141381001 -109306853 + (TA)n Simple_repeat Simple_repeat 2 87 0 313 275 183 8 chr2 141381081 141381321 -109306533 - L1MB7 LINE L1 -1979 5829 5548 249 33 0 0 chr2 141383205 141383235 -109304619 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 284 274 78 0 chr2 141383562 141383664 -109304190 + L1MC/D LINE L1 5548 5657 -2151 186 236 0 0 chr2 141383898 141383953 -109303901 + (CATA)n Simple_repeat Simple_repeat 2 56 0 406 274 47 9 chr2 141384010 141384174 -109303680 + MER74A LTR ERVL 67 245 -377 307 173 0 0 chr2 141384177 141384229 -109303625 + MLT1B LTR MaLR 328 379 -11 271 263 13 26 chr2 141384246 141384322 -109303532 - L2 LINE L2 -18 3254 3180 573 300 50 15 chr2 141384539 141384739 -109303115 + L2 LINE L2 2758 2964 -350 830 299 84 11 chr2 141385501 141385869 -109301985 + LTR33 LTR ERVL 126 520 -1 2185 108 0 3 chr2 141385977 141386282 -109301572 + AluY SINE Alu 1 304 -7 293 265 113 40 chr2 141386814 141386965 -109300889 - L1ME LINE L1 -389 5732 5571 * 2468 143 17 49 chr2 141386957 141387426 -109300428 - L1MB7 LINE L1 -151 6033 5580 971 183 116 53 chr2 141388153 141388374 -109299480 - MER4C LTR ERV1 -143 322 76 226 0 0 56 chr2 141388374 141388410 -109299444 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 971 183 116 53 chr2 141388410 141388489 -109299365 - MER4C LTR ERV1 -389 76 3 2153 201 48 84 chr2 141389227 141389937 -109297917 - LTR8A LTR ERV1 0 727 44 1474 188 164 13 chr2 141390749 141391121 -109296733 - MSTA LTR MaLR 0 428 1 8776 142 24 46 chr2 141391132 141392741 -109295113 - MSTA-int LTR MaLR -4 1576 3 1668 165 141 21 chr2 141392743 141393125 -109294729 - MSTA LTR MaLR 0 428 1 225 188 0 21 chr2 141393190 141393238 -109294616 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 1046 324 80 16 chr2 141393717 141394165 -109293689 - LTR16C LTR ERVL -14 477 1 1644 202 28 17 chr2 141395638 141395995 -109291859 + MLT1A1 LTR MaLR 1 361 -4 191 216 189 54 chr2 141396440 141396514 -109291340 - MIR3 SINE MIR -11 197 114 203 32 65 0 chr2 141396514 141396545 -109291309 + A-rich Low_complexity Low_complexity 2 34 0 2431 75 0 3 chr2 141396609 141396903 -109290951 + AluY SINE Alu 2 294 -17 2373 169 64 23 chr2 141398288 141398726 -109289128 - LTR32 LTR ERVL -1 470 15 2274 139 17 3 chr2 141398968 141399327 -109288527 + THE1B LTR MaLR 1 364 0 10507 110 25 28 chr2 141399327 141400912 -109286942 + THE1B-int LTR MaLR 1 1580 0 2438 114 14 3 chr2 141400912 141401272 -109286582 + THE1B LTR MaLR 1 364 0 545 203 102 0 chr2 141401679 141401807 -109286047 - MER96 DNA MER1_type? 0 175 35 252 0 0 0 chr2 141402969 141402997 -109284857 + (CA)n Simple_repeat Simple_repeat 2 29 0 213 300 38 12 chr2 141403468 141403548 -109284306 - MIR SINE MIR -6 256 175 298 255 67 34 chr2 141403563 141403710 -109284144 - MLT1K LTR MaLR 0 588 437 1369 169 71 71 chr2 141403710 141404088 -109283766 - LTR8A LTR ERV1 -2 725 345 1694 214 48 15 chr2 141404088 141404500 -109283354 + MSTB LTR MaLR 1 426 0 1369 169 71 71 chr2 141404500 141404559 -109283295 - LTR8A LTR ERV1 -381 346 288 1101 219 132 20 chr2 141404738 141405213 -109282641 - LOR1-int LTR ERV1 -1975 3359 2542 1950 142 12 3 chr2 141405222 141405553 -109282301 + MSTA LTR MaLR 95 428 0 1919 188 73 107 chr2 141405553 141406182 -109281672 - LOR1-int LTR ERV1 -4269 3268 2661 7368 185 69 41 chr2 141406300 141408505 -109279349 - LOR1-int LTR ERV1 -122 6141 4056 447 252 161 12 chr2 141408606 141408848 -109279006 + LTR16A1 LTR ERVL 177 454 -3 372 356 69 35 chr2 141408879 141409032 -109278822 + HERV16 LTR ERVL 23 169 -4827 1375 214 151 17 chr2 141409032 141409444 -109278410 + MLT1C LTR MaLR 1 467 0 372 356 69 35 chr2 141409444 141409712 -109278142 + HERV16 LTR ERVL 169 474 -4522 2323 83 3 0 chr2 141409712 141410000 -109277854 + AluSp SINE Alu 11 299 -14 372 356 69 35 chr2 141410000 141410186 -109277668 + HERV16 LTR ERVL 474 652 -4344 291 264 22 22 chr2 141410358 141410449 -109277405 + MIR SINE MIR 64 154 -108 400 250 21 21 chr2 141411358 141411498 -109276356 - L1ME4a LINE L1 -199 5922 5783 238 259 58 14 chr2 141411591 141411730 -109276124 - L1ME4a LINE L1 -3 6118 5974 191 228 217 11 chr2 141411980 141412072 -109275782 + MIR3 SINE MIR 50 160 -48 633 158 97 0 chr2 141412252 141412366 -109275488 + FLAM_C SINE Alu 1 125 -18 428 298 35 6 chr2 141412412 141412583 -109275271 - LTR16A1 LTR ERVL 0 457 282 2103 139 0 0 chr2 141412713 141413014 -109274840 + AluSg SINE Alu 1 301 -9 1550 201 53 6 chr2 141413157 141413496 -109274358 + MLT1A1 LTR MaLR 11 365 0 1813 89 0 13 chr2 141413876 141414113 -109273741 + AluSq SINE Alu 47 280 -33 180 0 0 0 chr2 141414113 141414133 -109273721 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 23 33 0 0 chr2 141414431 141414461 -109273393 + AT_rich Low_complexity Low_complexity 1 30 0 364 266 9 0 chr2 141414729 141414842 -109273012 + LTR43 LTR ERV1 183 296 -306 1335 230 137 51 chr2 141415099 141415928 -109271926 - LTR1B LTR ERV1 0 922 1 799 227 99 6 chr2 141417108 141417280 -109270574 + MER5A DNA MER1_type 1 188 -1 185 274 0 39 chr2 141417988 141418039 -109269815 + MER5B DNA MER1_type 1 49 -129 * 367 272 22 11 chr2 141418033 141418125 -109269729 - MER5B DNA MER1_type -82 96 4 551 89 0 0 chr2 141418721 141418800 -109269054 - MADE1 DNA Mariner 0 80 2 200 333 0 0 chr2 141418838 141418886 -109268968 + L2 LINE L2 3210 3257 -15 35 24 0 0 chr2 141419799 141419841 -109268013 + AT_rich Low_complexity Low_complexity 1 42 0 1872 166 3 3 chr2 141421312 141421608 -109266246 + AluSx SINE Alu 1 296 -16 278 325 83 29 chr2 141422175 141422452 -109265402 + MLT1L LTR MaLR 322 613 -2 2023 132 4 4 chr2 141422579 141422880 -109264974 + AluSc SINE Alu 1 301 0 348 301 62 7 chr2 141423037 141423183 -109264671 + HAL1 LINE L1 1152 1305 -1202 304 284 86 0 chr2 141423348 141423464 -109264390 - L1ME3A LINE L1 -9 6161 6036 917 137 7 14 chr2 141423504 141423643 -109264211 - AluSg/x SINE Alu -21 291 154 329 267 45 17 chr2 141423752 141423928 -109263926 - L1ME3A LINE L1 -325 5837 5657 245 200 0 0 chr2 141424415 141424460 -109263394 - L1ME3A LINE L1 -501 5669 5625 385 314 12 6 chr2 141424535 141424707 -109263147 - L1MC4 LINE L1 -146 7896 7724 315 258 205 7 chr2 141425347 141425489 -109262365 - L1MD3 LINE L1 -1058 6750 6604 248 309 43 63 chr2 141426038 141426245 -109261609 - L2 LINE L2 -1857 1457 1255 627 247 32 19 chr2 141426310 141426468 -109261386 - MER5B DNA MER1_type -18 160 1 545 88 0 12 chr2 141426765 141426845 -109261009 - MADE1 DNA Mariner -1 79 1 441 305 5 85 chr2 141427338 141427538 -109260316 - MIR3 SINE MIR -5 203 20 206 278 82 93 chr2 141428685 141428840 -109259014 + L3 LINE CR1 1216 1370 -207 1578 66 0 71 chr2 141428840 141429066 -109258788 - AluY SINE Alu -1 310 101 206 278 82 93 chr2 141429066 141429104 -109258750 + L3 LINE CR1 1370 1407 -170 237 281 26 70 chr2 141429515 141429629 -109258225 + MIR SINE MIR 112 220 -42 212 209 0 0 chr2 141430614 141430657 -109257197 - MIR SINE MIR -67 141 99 899 152 125 76 chr2 141431829 141432053 -109255801 + MER46A DNA MER2_type 2 236 0 2076 132 0 28 chr2 141432095 141432414 -109255440 + AluSx SINE Alu 3 312 0 927 193 39 0 chr2 141434155 141434336 -109253518 + MER5A DNA MER1_type 2 189 0 2674 281 72 43 chr2 141435033 141435141 -109252713 + L2 LINE L2 1398 1501 -1812 3714 119 87 7 chr2 141435141 141435737 -109252117 - LTR9B LTR ERV1 0 644 1 2674 281 72 43 chr2 141435737 141436436 -109251418 + L2 LINE L2 1501 2179 -1134 192 40 0 0 chr2 141436436 141436461 -109251393 + (TC)n Simple_repeat Simple_repeat 2 26 0 2674 281 72 43 chr2 141436461 141437080 -109250774 + L2 LINE L2 2179 3306 -7 410 259 100 46 chr2 141437509 141437748 -109250106 - LTR33A LTR ERVL -3 520 269 2084 157 0 0 chr2 141439226 141439519 -109248335 + AluSx SINE Alu 1 293 -19 204 388 96 34 chr2 141439537 141439893 -109247961 - L2 LINE L2 -357 2957 2580 1779 217 61 60 chr2 141439894 141440528 -109247326 + LTR28 LTR ERV1 2 654 -349 358 213 57 85 chr2 141440544 141440685 -109247169 + LTR27 LTR ERV1 500 636 0 1064 204 91 106 chr2 141440783 141441245 -109246609 + LTR16A1 LTR ERVL 1 455 -2 577 308 120 0 chr2 141441248 141441498 -109246356 - L2 LINE L2 -958 2356 2077 997 269 61 39 chr2 141442416 141442873 -109244981 + MLT1C LTR MaLR 1 467 0 390 302 132 15 chr2 141442980 141443185 -109244669 - MIR SINE MIR -28 234 6 429 214 71 27 chr2 141444482 141444594 -109243260 + MIR SINE MIR 26 142 -120 947 202 11 5 chr2 141445641 141445829 -109242025 - MER5A DNA MER1_type 0 189 1 299 264 42 90 chr2 141445844 141445988 -109241866 + MIR SINE MIR 17 153 -55 842 291 134 30 chr2 141446011 141446503 -109241351 - MLT1K LTR MaLR -29 559 17 426 281 103 30 chr2 141446733 141446953 -109240901 + MIR SINE MIR 3 250 -12 201 74 0 0 chr2 141448902 141448929 -109238925 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1019 327 204 13 chr2 141449113 141450010 -109237844 - L2 LINE L2 -441 2873 1806 1010 276 87 86 chr2 141450016 141450350 -109237504 - L2 LINE L2 -9 3304 2972 3288 64 5 0 chr2 141450350 141450772 -109237082 + L1PA6 LINE L1 5716 6139 -15 1010 276 87 86 chr2 141450772 141451258 -109236596 - L2 LINE L2 -341 2972 2453 1798 153 2 78 chr2 141451376 141451442 -109236412 - MLT1B LTR MaLR 0 390 321 2131 121 0 0 chr2 141451442 141451753 -109236101 + AluSg SINE Alu 1 311 0 1798 153 2 78 chr2 141451753 141452083 -109235771 - MLT1B LTR MaLR -69 321 23 531 336 44 44 chr2 141452835 141453064 -109234790 + MIR SINE MIR 21 249 -13 267 172 184 0 chr2 141453223 141453310 -109234544 - MER45 DNA AcHobo -21 1560 1458 * 329 284 87 0 chr2 141453303 141453430 -109234424 - MER45 DNA AcHobo -847 193 56 207 0 0 0 chr2 141454141 141454164 -109233690 + (A)n Simple_repeat Simple_repeat 1 23 0 257 331 90 24 chr2 141454467 141454633 -109233221 + MIR3 SINE MIR 25 201 -7 2778 99 0 0 chr2 141455109 141455472 -109232382 + THE1B LTR MaLR 1 363 -1 1901 145 3 0 chr2 141456448 141456759 -109231095 + AluSx SINE Alu 1 312 0 1849 187 52 3 chr2 141456919 141457267 -109230587 - MLT1A1 LTR MaLR 0 365 1 320 350 32 13 chr2 141457425 141457582 -109230272 + LTR67 LTR ERVL 83 242 -315 301 302 101 13 chr2 141457764 141457913 -109229941 + LTR67 LTR ERVL 369 530 -27 272 205 72 36 chr2 141458526 141458609 -109229245 - MIR SINE MIR -40 222 137 369 0 0 0 chr2 141459843 141459884 -109227970 + (TG)n Simple_repeat Simple_repeat 2 42 0 254 143 0 0 chr2 141460192 141460239 -109227615 - MER45 DNA AcHobo -3 1578 1532 200 338 0 52 chr2 141460758 141460835 -109227019 + L2 LINE L2 3241 3313 0 180 0 0 0 chr2 141462171 141462191 -109225663 + (A)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr2 141462739 141462759 -109225095 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 2274 123 7 0 chr2 141463232 141463542 -109224312 + AluSx SINE Alu 1 312 0 340 183 26 17 chr2 141464011 141464126 -109223728 + CT-rich Low_complexity Low_complexity 1 116 0 1968 132 0 38 chr2 141464126 141464557 -109223297 - AluSx SINE Alu 0 419 1 187 403 81 5 chr2 141465107 141465318 -109222536 + L2 LINE L2 2561 2787 -527 2069 253 41 13 chr2 141465439 141466118 -109221736 - L1MC4a LINE L1 -5 7803 7106 275 371 32 78 chr2 141466135 141466483 -109221371 + L2 LINE L2 2941 3272 0 206 160 20 0 chr2 141467133 141467183 -109220671 + (CAT)n Simple_repeat Simple_repeat 1 51 0 190 167 0 0 chr2 141467461 141467497 -109220357 + L2 LINE L2 3273 3308 -5 247 400 31 6 chr2 141467768 141467928 -109219926 + L2 LINE L2 2508 2671 -643 323 212 15 0 chr2 141468306 141468372 -109219482 + Tigger2 DNA MER2_type 1 67 -2651 * 2351 167 9 13 chr2 141468358 141468812 -109219042 + Tigger2 DNA MER2_type 2267 2718 0 574 259 131 56 chr2 141468896 141469271 -109218583 - MLT1J2 LTR MaLR -21 429 27 359 305 167 23 chr2 141469373 141469547 -109218307 + MIR SINE MIR 20 218 -44 253 322 52 17 chr2 141469577 141469692 -109218162 - L2 LINE L2 -5 3267 3149 898 258 41 0 chr2 141469853 141470124 -109217730 + L1ME3 LINE L1 5465 5746 -424 345 247 0 0 chr2 141470122 141470199 -109217655 + L1ME3 LINE L1 5998 6074 -88 * 207 214 0 0 chr2 141470246 141470288 -109217566 + (TAA)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr2 141471119 141471140 -109216714 + AT_rich Low_complexity Low_complexity 1 21 0 401 226 0 170 chr2 141472145 141472304 -109215550 + L2 LINE L2 1117 1248 -2066 509 270 58 23 chr2 141472364 141472538 -109215316 - MIR SINE MIR -81 181 2 * 662 301 106 42 chr2 141472538 141472925 -109214929 + L2 LINE L2 1257 1669 -1645 597 241 100 30 chr2 141472968 141473313 -109214541 + MLT1I LTR MaLR 66 402 -7 1421 302 107 68 chr2 141473338 141474723 -109213131 + L2 LINE L2 1701 3154 -159 1910 170 0 0 chr2 141474723 141475011 -109212843 - AluSx SINE Alu -24 288 1 1421 302 107 68 chr2 141475011 141475178 -109212676 + L2 LINE L2 3154 3313 0 1472 80 15 0 chr2 141475373 141475572 -109212282 - L1PA7 LINE L1 -1 6153 5952 11391 141 18 107 chr2 141475572 141478369 -109209485 - L1P LINE L1 -3589 2557 12 254 348 34 8 chr2 141479895 141480013 -109207841 + MIR SINE MIR 20 140 -122 201 250 42 0 chr2 141480117 141480165 -109207689 + MIR SINE MIR 91 140 -122 263 236 0 0 chr2 141480405 141480460 -109207394 + CT-rich Low_complexity Low_complexity 1 55 0 390 155 295 47 chr2 141481304 141481433 -109206421 - MLT1E LTR MaLR -432 161 1 1637 197 47 26 chr2 141482505 141482885 -109204969 - MLT1B LTR MaLR -2 388 1 346 323 92 37 chr2 141482886 141483288 -109204566 + L2 LINE L2 1907 2330 -984 753 316 15 48 chr2 141483317 141483653 -109204201 - L2 LINE L2 0 3313 2989 202 359 84 56 chr2 141483878 141484165 -109203689 + L2 LINE L2 2433 2727 -587 197 174 0 22 chr2 141486012 141486058 -109201796 + CT-rich Low_complexity Low_complexity 3 47 0 203 196 174 0 chr2 141486078 141486124 -109201730 - L2 LINE L2 -14 3299 3246 3844 186 35 58 chr2 141486453 141487335 -109200519 + MER21B LTR ERV1 1 862 -1 3349 228 57 21 chr2 141487984 141489151 -109198703 - L1MD2 LINE L1 -19 6340 5130 30 27 0 0 chr2 141489151 141489188 -109198666 + AT_rich Low_complexity Low_complexity 1 37 0 1129 241 57 23 chr2 141489271 141489657 -109198197 + L1ME3A LINE L1 5771 6169 -1 1186 205 103 78 chr2 141489994 141490481 -109197373 - L1ME1 LINE L1 -4 6162 5664 252 286 14 0 chr2 141490522 141490592 -109197262 - Charlie8 DNA MER1_type -3 2414 2344 1189 197 25 105 chr2 141490816 141491141 -109196713 + AluJo SINE Alu 1 299 -3 257 311 95 5 chr2 141491141 141491287 -109196567 + MIR SINE MIR 15 169 -78 6523 86 7 0 chr2 141491559 141492600 -109195254 - L1PA11 LINE L1 -1 6173 5128 269 139 0 0 chr2 141492817 141492860 -109194994 + L2 LINE L2 3240 3282 -31 288 314 10 29 chr2 141493083 141493185 -109194669 + MIR3 SINE MIR 101 200 -8 258 313 0 0 chr2 141493270 141493334 -109194520 + MER5A DNA MER1_type 26 89 -100 24 0 0 0 chr2 141493908 141493932 -109193922 + AT_rich Low_complexity Low_complexity 1 24 0 300 363 128 33 chr2 141494244 141494633 -109193221 - L2 LINE L2 -10 3262 2837 189 0 0 0 chr2 141494879 141494900 -109192954 + (A)n Simple_repeat Simple_repeat 1 21 0 208 185 24 39 chr2 141495305 141495517 -109192337 + (CA)n Simple_repeat Simple_repeat 1 208 0 271 268 16 32 chr2 141495534 141495657 -109192197 + (CA)n Simple_repeat Simple_repeat 2 122 0 321 89 0 0 chr2 141496410 141496455 -109191399 + (CATA)n Simple_repeat Simple_repeat 2 46 0 251 302 35 23 chr2 141496758 141496844 -109191010 - L2 LINE L2 0 3313 3227 27 0 0 0 chr2 141497590 141497617 -109190237 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 141498323 141498346 -109189508 + AT_rich Low_complexity Low_complexity 1 23 0 323 181 14 0 chr2 141498385 141498457 -109189397 + CT-rich Low_complexity Low_complexity 4 76 0 625 271 30 42 chr2 141499195 141499431 -109188423 + MIR SINE MIR 30 262 0 3813 166 75 14 chr2 141499615 141500088 -109187766 - L1MA7 LINE L1 -4 6287 5844 354 45 0 0 chr2 141500088 141500132 -109187722 + (TG)n Simple_repeat Simple_repeat 1 44 0 3813 166 75 14 chr2 141500132 141500498 -109187356 - L1MA7 LINE L1 -447 5844 5397 * 4706 191 40 12 chr2 141500492 141501632 -109186222 + L1MA7 LINE L1 4221 5391 -755 234 252 67 44 chr2 141502304 141502439 -109185415 + L1ME LINE L1 5722 5859 -262 180 77 0 0 chr2 141504361 141504387 -109183467 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 362 321 91 6 chr2 141504463 141504628 -109183226 + MIR SINE MIR 74 252 -10 2162 109 50 31 chr2 141505578 141505935 -109181919 - THE1B LTR MaLR 0 364 1 306 0 0 0 chr2 141506253 141506287 -109181567 + (TG)n Simple_repeat Simple_repeat 1 34 0 1569 103 153 13 chr2 141506480 141506780 -109181074 - L1PB2 LINE L1 -2 6149 5808 436 324 133 0 chr2 141507029 141507239 -109180615 - MIR SINE MIR -14 248 11 1788 195 26 81 chr2 141507439 141507968 -109179886 + MLT1D LTR MaLR 5 504 -1 1330 116 106 0 chr2 141508235 141508442 -109179412 + MER30 DNA MER1_type 1 229 -1 365 343 61 28 chr2 141508958 141509171 -109178683 + MIR SINE MIR 26 245 -17 728 244 161 63 chr2 141509581 141510028 -109177826 + MLT1D LTR MaLR 15 505 0 670 302 82 28 chr2 141510455 141510968 -109176886 + MER115 DNA AcHobo 87 693 0 381 301 155 24 chr2 141512813 141513026 -109174828 + L3 LINE CR1 648 888 -689 485 276 35 53 chr2 141513164 141513334 -109174520 + L3 LINE CR1 1338 1504 -73 744 262 26 52 chr2 141513427 141513656 -109174198 + MIR SINE MIR 28 250 -12 2033 142 17 3 chr2 141513663 141513959 -109173895 - AluSx SINE Alu -12 300 1 273 29 0 0 chr2 141514366 141514400 -109173454 + (GA)n Simple_repeat Simple_repeat 1 34 0 279 211 35 111 chr2 141515649 141515728 -109172126 - MER69 DNA AcHobo -22 2504 2421 2069 121 46 0 chr2 141515728 141516010 -109171844 + AluSq SINE Alu 1 295 -18 279 211 35 111 chr2 141516010 141516129 -109171725 - MER69 DNA AcHobo -105 2421 2321 618 297 107 10 chr2 141516137 141516437 -109171417 - MER69 DNA AcHobo -897 329 1 788 270 15 20 chr2 141517644 141517844 -109170010 - MIR SINE MIR -62 200 2 456 100 0 50 chr2 141517986 141518066 -109169788 - MADE1 DNA Mariner 0 80 5 24 67 0 0 chr2 141518307 141518352 -109169502 + AT_rich Low_complexity Low_complexity 1 45 0 784 263 112 51 chr2 141518436 141518965 -109168889 - MER34B LTR ERV1 0 565 5 657 288 62 12 chr2 141518979 141519219 -109168635 - MIR SINE MIR -6 256 5 808 205 41 0 chr2 141519913 141520084 -109167770 + MER5B DNA MER1_type 1 178 0 255 330 45 0 chr2 141521212 141521300 -109166554 + MIR SINE MIR 5 96 -166 932 258 19 8 chr2 141521310 141521566 -109166288 - MER93a LTR ERV1 -33 369 111 470 194 157 0 chr2 141521937 141522071 -109165783 + MIR SINE MIR 108 262 0 333 281 68 41 chr2 141522448 141522594 -109165260 + MIR SINE MIR 41 190 -72 1956 143 10 10 chr2 141522594 141522895 -109164959 + AluJo SINE Alu 1 301 -11 182 322 60 70 chr2 141522939 141523138 -109164716 + L2 LINE L2 2319 2515 -799 22 35 0 0 chr2 141524914 141524943 -109162911 + AT_rich Low_complexity Low_complexity 1 29 0 591 147 0 28 chr2 141525012 141525121 -109162733 - LTR7 LTR ERV1 0 450 345 338 183 10 0 chr2 141525124 141525210 -109162644 - HERVH LTR ERV1 -2957 4028 3955 2831 121 38 6 chr2 141525244 141525724 -109162130 - HERVH LTR ERV1 -3720 3993 3499 1347 48 0 0 chr2 141525839 141526006 -109161848 + L1PA6 LINE L1 5988 6154 0 502 296 24 0 chr2 141526007 141526176 -109161678 + L1MEc LINE L1 59 231 -6165 243 246 0 0 chr2 141526218 141526275 -109161579 - MLT2B1 LTR ERVL 0 520 464 1431 188 76 76 chr2 141526352 141526746 -109161108 - MLT2B1 LTR ERVL -64 456 63 2138 133 16 16 chr2 141526750 141527119 -109160735 + THE1C LTR MaLR 7 375 0 328 141 16 0 chr2 141527119 141527182 -109160672 - MLT2B1 LTR ERVL -447 68 5 2920 265 71 52 chr2 141527184 141528544 -109159310 + L1MEc LINE L1 253 1654 -4742 2303 97 0 3 chr2 141528544 141528853 -109159001 - AluY SINE Alu -3 308 1 2920 265 71 52 chr2 141528853 141529209 -109158645 + L1MEc LINE L1 1654 2002 -4394 980 167 0 72 chr2 141529211 141529391 -109158463 - FRAM SINE Alu -11 165 1 294 290 20 10 chr2 141529511 141529611 -109158243 - MER3 DNA MER1_type -102 107 7 399 218 112 12 chr2 141529616 141529786 -109158068 + L1MEc LINE L1 2060 2246 -4150 359 251 63 126 chr2 141530576 141530815 -109157039 + MIR SINE MIR 32 255 -7 1570 160 42 8 chr2 141531145 141531408 -109156446 + AluJb SINE Alu 35 306 -6 265 208 0 69 chr2 141534061 141534133 -109153721 - L2 LINE L2 -2 3311 3245 197 216 0 39 chr2 141535560 141535611 -109152243 + L2 LINE L2 3256 3304 -9 637 361 127 34 chr2 141535802 141536541 -109151313 + L2 LINE L2 1168 1975 -1339 2476 206 18 21 chr2 141536549 141536675 -109151179 + MER68 LTR ERV1 1 126 -436 3521 170 21 14 chr2 141536675 141537339 -109150515 + L1MA10 LINE L1 5658 6326 -8 219 36 0 0 chr2 141537341 141537369 -109150485 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2476 206 18 21 chr2 141537369 141537803 -109150051 + MER68 LTR ERV1 127 562 0 30 59 0 0 chr2 141537878 141537929 -109149925 + AT_rich Low_complexity Low_complexity 1 51 0 2138 180 0 0 chr2 141537929 141538301 -109149553 - L1PA16 LINE L1 -1 6165 5794 2743 145 61 0 chr2 141538308 141538666 -109149188 + L1P4 LINE L1 5105 5440 -726 399 21 0 0 chr2 141538666 141538714 -109149140 + (TAA)n Simple_repeat Simple_repeat 1 48 0 2743 145 61 0 chr2 141538714 141539007 -109148847 + L1P4 LINE L1 5440 5794 -372 345 340 59 12 chr2 141539123 141539429 -109148425 + L2 LINE L2 2221 2598 -716 435 239 39 23 chr2 141539480 141539610 -109148244 + MLT1A2 LTR MaLR 2 133 -241 330 211 32 81 chr2 141539711 141539742 -109148112 + MLT1A2 LTR MaLR 159 190 -200 396 0 0 0 chr2 141539742 141539786 -109148068 + (TC)n Simple_repeat Simple_repeat 1 44 0 330 211 32 81 chr2 141539786 141539877 -109147977 + MLT1A2 LTR MaLR 190 275 -115 385 348 97 35 chr2 141539883 141540437 -109147417 + L2 LINE L2 2716 3307 -6 226 322 0 0 chr2 141540493 141540552 -109147302 + L2 LINE L2 2771 2829 -485 418 372 37 59 chr2 141540677 141541086 -109146768 + L2 LINE L2 2832 3231 -41 378 0 0 0 chr2 141541086 141541128 -109146726 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 316 180 41 0 chr2 141541994 141542067 -109145787 - L1P4 LINE L1 -618 5547 5472 1476 84 5 0 chr2 141542445 141542648 -109145206 - L1PA5 LINE L1 -17 6137 5934 7007 43 15 0 chr2 141542648 141543515 -109144339 + L1PA5 LINE L1 5272 6152 -2 278 26 26 0 chr2 141543648 141543687 -109144167 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 813 162 7 0 chr2 141543707 141543855 -109143999 - MER4C LTR ERV1 0 465 317 186 103 0 0 chr2 141543855 141543884 -109143970 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 4178 139 17 7 chr2 141543886 141544574 -109143280 - L1PA15 LINE L1 -9 6156 5462 303 104 0 0 chr2 141544771 141544819 -109143035 + (TA)n Simple_repeat Simple_repeat 2 49 0 953 201 70 27 chr2 141544819 141545078 -109142776 - MER41-int LTR ERV1 -3935 2011 1742 1764 199 47 69 chr2 141545196 141545598 -109142256 - MER41-int LTR ERV1 -2963 1917 1508 2387 155 41 2 chr2 141545598 141546010 -109141844 + MSTA LTR MaLR 1 428 0 1764 199 47 69 chr2 141546010 141546109 -109141745 - MER41-int LTR ERV1 -3372 1508 767 3913 189 27 37 chr2 141546187 141547211 -109140643 - MER41-int LTR ERV1 -4464 1482 355 1979 199 52 125 chr2 141547273 141548057 -109139797 - LTR8A LTR ERV1 0 727 1 442 396 36 3 chr2 141548069 141548455 -109139399 - MLT1K LTR MaLR -156 432 34 248 208 28 0 chr2 141548473 141548545 -109139309 + MER53 DNA DNA 25 98 -91 583 120 56 8 chr2 141548550 141548675 -109139179 - MER53 DNA DNA -58 131 1 420 292 140 38 chr2 141549852 141550088 -109137766 - MIR SINE MIR -1 261 2 2138 120 7 3 chr2 141550620 141550912 -109136942 - AluSq SINE Alu -14 299 7 3106 165 68 2 chr2 141551321 141551928 -109135926 + MER39B LTR ERV1 7 653 0 2988 153 18 33 chr2 141552288 141553285 -109134569 + L1MA5 LINE L1 5008 5941 -359 1895 186 11 8 chr2 141553130 141553501 -109134353 + L1PB4 LINE L1 5783 6154 -2 * 441 148 56 113 chr2 141553690 141553832 -109134022 + LTR23 LTR ERV1 18 151 -286 550 144 59 105 chr2 141554234 141554387 -109133467 + LTR23 LTR ERV1 6 151 -286 1384 119 11 60 chr2 141554461 141554746 -109133108 + LTR23 LTR ERV1 167 437 0 196 380 35 35 chr2 141554757 141554870 -109132984 - MIR SINE MIR -114 148 36 1262 175 4 4 chr2 141555111 141555345 -109132509 + MER74A LTR ERVL 325 558 0 330 321 6 30 chr2 141555349 141555514 -109132340 + MIR SINE MIR 94 254 -8 28 48 0 0 chr2 141555962 141556004 -109131850 + AT_rich Low_complexity Low_complexity 1 42 0 410 335 80 0 chr2 141556851 141557027 -109130827 - MIR SINE MIR -6 256 67 3248 155 61 45 chr2 141558605 141559297 -109128557 + L1MC1 LINE L1 5373 6075 -258 723 197 7 33 chr2 141559298 141559450 -109128404 + MLT1A1 LTR MaLR 1 148 -217 873 120 0 0 chr2 141559454 141559579 -109128275 + AluSp/q SINE Alu 182 306 -7 1204 151 44 0 chr2 141559586 141559791 -109128063 + MLT1A1 LTR MaLR 148 361 -4 1137 203 15 26 chr2 141559792 141560058 -109127796 + L1MC1 LINE L1 6071 6333 0 21 0 0 0 chr2 141560196 141560217 -109127637 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 141560291 141560312 -109127542 + AT_rich Low_complexity Low_complexity 1 21 0 288 238 74 78 chr2 141560327 141560583 -109127271 - HAL1b LINE L1 -380 968 714 1184 206 181 5 chr2 141560596 141560993 -109126861 + LTR54B LTR ERV1 1 467 -31 24 0 0 0 chr2 141561018 141561042 -109126812 + AT_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr2 141561144 141561184 -109126670 + AT_rich Low_complexity Low_complexity 1 40 0 34 65 0 0 chr2 141562255 141562317 -109125537 + AT_rich Low_complexity Low_complexity 1 62 0 185 390 13 0 chr2 141562456 141562533 -109125321 + L2 LINE L2 3155 3232 -40 22 35 0 0 chr2 141563770 141563799 -109124055 + AT_rich Low_complexity Low_complexity 1 29 0 2106 134 7 0 chr2 141564010 141564315 -109123539 + AluSx SINE Alu 1 307 -5 563 277 10 35 chr2 141564389 141564591 -109123263 + MIR SINE MIR 66 262 0 10616 186 12 22 chr2 141564780 141567852 -109120002 - L1PA15 LINE L1 -8 6808 3757 6685 232 66 28 chr2 141567866 141568775 -109119079 - L1PA15 LINE L1 -3418 3379 2506 1828 113 0 0 chr2 141568775 141569015 -109118839 + AluSx SINE Alu 53 292 -20 6685 232 66 28 chr2 141569015 141570965 -109116889 - L1PA15 LINE L1 -4291 2506 406 3506 229 35 18 chr2 141571295 141572403 -109115451 - L1M4 LINE L1 -1198 4948 3822 431 163 12 0 chr2 141572401 141572487 -109115367 - L1ME2 LINE L1 -228 5936 5850 * 306 350 85 14 chr2 141572867 141573090 -109114764 + MIR SINE MIR 12 250 -12 393 58 0 0 chr2 141573328 141573380 -109114474 + (TTTC)n Simple_repeat Simple_repeat 2 53 0 2110 128 26 0 chr2 141573382 141573686 -109114168 - AluSx SINE Alu 0 312 1 445 318 86 19 chr2 141573797 141574064 -109113790 - MLT1I LTR MaLR -2 407 123 2487 124 24 0 chr2 141574097 141574508 -109113346 + HSMAR2 DNA Mariner 2 422 -880 1686 194 46 31 chr2 141574508 141575050 -109112804 - MLT2A2 LTR ERVL 0 554 3 5028 149 19 5 chr2 141575053 141575918 -109111936 + HSMAR2 DNA Mariner 419 1295 -7 24 32 0 0 chr2 141576493 141576524 -109111330 + AT_rich Low_complexity Low_complexity 1 31 0 1380 264 51 30 chr2 141576680 141577188 -109110666 - LTR40a LTR ERVL 0 519 1 844 249 51 13 chr2 141577189 141577426 -109110428 - HERVL40 LTR ERVL -1 5529 5284 252 273 118 18 chr2 141577429 141577539 -109110315 - MER89-int LTR ERV1 -328 6473 6353 3836 287 50 20 chr2 141578429 141579780 -109108074 - HERVL40 LTR ERVL -870 4660 3269 395 228 108 0 chr2 141579805 141579972 -109107882 + L1MEc LINE L1 2182 2366 -4030 193 354 10 42 chr2 141581077 141581173 -109106681 + L3b LINE CR1 1213 1305 -278 1075 194 27 105 chr2 141582612 141583013 -109104841 + MLT2D LTR ERVL 1 370 -44 636 40 24 40 chr2 141585619 141585743 -109102111 + (TA)n Simple_repeat Simple_repeat 2 123 0 1967 152 3 0 chr2 141587078 141587381 -109100473 - AluSx SINE Alu -8 304 1 306 0 0 0 chr2 141587584 141587618 -109100236 + (CA)n Simple_repeat Simple_repeat 1 34 0 240 111 0 0 chr2 141587617 141587653 -109100201 + (TA)n Simple_repeat Simple_repeat 2 37 0 * 21 36 0 0 chr2 141587751 141587779 -109100075 + AT_rich Low_complexity Low_complexity 1 28 0 201 318 0 0 chr2 141587829 141587895 -109099959 + A-rich Low_complexity Low_complexity 3 68 0 2665 276 71 27 chr2 141588872 141589913 -109097941 + L1M3d LINE L1 9 1095 -4796 6250 92 2 53 chr2 141590001 141591150 -109096704 - L1PA10 LINE L1 -10 6158 5029 2461 103 11 5 chr2 141591173 141591540 -109096314 - L1PB1 LINE L1 -1 6150 5782 311 238 24 24 chr2 141591540 141591617 -109096237 + L1MC4 LINE L1 6612 6691 -1351 6893 99 3 33 chr2 141591720 141592850 -109095004 + HERVH LTR ERV1 1526 2622 -5091 7243 51 11 2 chr2 141593230 141594411 -109093443 - L1PA5 LINE L1 -4 6150 4967 2707 76 106 5 chr2 141594889 141595296 -109092558 + LTR7 LTR ERV1 1 448 -2 9777 87 42 12 chr2 141595298 141596845 -109091009 + HERVH LTR ERV1 1 1593 -6120 497 306 92 13 chr2 141598363 141598592 -109089262 - MIR SINE MIR -15 247 1 396 0 0 0 chr2 141598596 141598640 -109089214 + (TA)n Simple_repeat Simple_repeat 2 45 0 876 199 71 34 chr2 141598717 141598983 -109088871 - L1MB5 LINE L1 -26 6148 5873 289 121 52 0 chr2 141598975 141599033 -109088821 + L1MB4 LINE L1 6119 6179 -1 * 2458 177 34 43 chr2 141599227 141599881 -109087973 - pTR5 LTR ERV1 -1053 1385 738 690 114 19 0 chr2 141600063 141600168 -109087686 - HY1 scRNA scRNA -5 107 1 988 114 38 0 chr2 141600928 141601086 -109086768 - L1PA16 LINE L1 -3 6163 6000 29 60 0 0 chr2 141602238 141602288 -109085566 + AT_rich Low_complexity Low_complexity 1 50 0 1729 112 0 4 chr2 141602990 141603240 -109084614 - HERVH LTR ERV1 -2977 4736 4488 3365 107 4 6 chr2 141603242 141603745 -109084109 - HERVH LTR ERV1 -3720 3993 3492 796 142 22 0 chr2 141603735 141603869 -109083985 - HERVH LTR ERV1 -4423 3290 3154 * 1549 221 136 28 chr2 141604573 141605038 -109082816 + MER119 DNA MER1_type 69 583 0 237 308 222 0 chr2 141606455 141606572 -109081282 + L2 LINE L2 2713 2855 -459 * 424 231 148 50 chr2 141606559 141606741 -109081113 - L2 LINE L2 0 3313 3114 503 161 62 0 chr2 141606786 141606867 -109080987 - MER58B DNA MER1_type -1 340 255 442 181 133 0 chr2 141606863 141606946 -109080908 + MER58B DNA MER1_type 203 296 -45 * 416 254 66 97 chr2 141606973 141607071 -109080783 - Charlie8 DNA MER1_type -86 255 156 2651 33 3 0 chr2 141607071 141607377 -109080477 - AluY SINE Alu -2 309 3 416 254 66 97 chr2 141607377 141607506 -109080348 - Charlie8 DNA MER1_type -185 156 35 225 206 0 103 chr2 141607935 141608003 -109079851 + L2 LINE L2 3252 3312 -1 238 303 76 8 chr2 141608294 141608413 -109079441 - MLT1E LTR MaLR -49 544 418 526 272 27 27 chr2 141610706 141610890 -109076964 - MER117 DNA MER1_type -10 187 4 386 280 66 44 chr2 141611807 141611989 -109075865 + MIR SINE MIR 20 205 -57 1716 149 25 78 chr2 141612411 141612807 -109075047 + THE1C LTR MaLR 1 375 0 27 0 0 0 chr2 141612926 141612953 -109074901 + AT_rich Low_complexity Low_complexity 1 27 0 401 221 15 22 chr2 141613237 141613373 -109074481 - Alu SINE Alu 0 311 177 306 132 0 0 chr2 141613491 141613544 -109074310 + (TA)n Simple_repeat Simple_repeat 2 54 0 252 0 0 0 chr2 141613792 141613820 -109074034 + (TG)n Simple_repeat Simple_repeat 2 29 0 318 178 0 109 chr2 141613830 141613931 -109073923 + L1MC4 LINE L1 6614 6703 -1339 715 133 0 0 chr2 141613954 141614067 -109073787 - L1P5 LINE L1 -365 5786 5674 690 258 21 38 chr2 141614078 141614318 -109073536 - L1P3 LINE L1 -5788 673 438 11443 242 39 15 chr2 141614318 141618873 -109068981 + L1MB1 LINE L1 1088 5854 -550 656 204 38 0 chr2 141618874 141619031 -109068823 + L1MB1 LINE L1 6241 6403 -1 419 307 103 75 chr2 141619333 141619828 -109068026 - MLT1J LTR MaLR 0 511 3 217 370 35 17 chr2 141620920 141621093 -109066761 - L2 LINE L2 -1105 2209 2034 794 218 56 2 chr2 141621466 141621639 -109066215 - MER20 DNA MER1_type 0 219 34 225 139 0 0 chr2 141621783 141621826 -109066028 + (TA)n Simple_repeat Simple_repeat 2 44 0 2244 111 53 0 chr2 141622769 141623129 -109064725 - L1MA2 LINE L1 -1 6303 5925 740 233 10 31 chr2 141623392 141623422 -109064432 + MER63A DNA MER1_type 8 37 -1651 378 0 0 0 chr2 141623422 141623464 -109064390 + (CA)n Simple_repeat Simple_repeat 1 42 0 740 233 10 31 chr2 141623464 141623626 -109064228 + MER63A DNA MER1_type 37 196 -14 277 291 74 68 chr2 141623707 141623855 -109063999 + MIR SINE MIR 3 151 -111 453 300 67 57 chr2 141624080 141624380 -109063474 - Charlie8 DNA MER1_type -2021 396 94 321 291 241 5 chr2 141624748 141624951 -109062903 + MIR SINE MIR 1 251 -11 183 42 0 0 chr2 141625099 141625123 -109062731 + (TTG)n Simple_repeat Simple_repeat 2 25 0 21 36 0 0 chr2 141625243 141625271 -109062583 + AT_rich Low_complexity Low_complexity 1 28 0 7625 161 17 12 chr2 141626011 141627929 -109059925 - L1M1 LINE L1 -544 5760 3836 239 112 31 51 chr2 141627957 141628055 -109059799 + (TAAA)n Simple_repeat Simple_repeat 4 99 0 202 143 24 0 chr2 141628055 141628097 -109059757 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 515 205 45 0 chr2 141628136 141628248 -109059606 - L1M1 LINE L1 -2292 3854 3738 9896 88 2 4 chr2 141628248 141629565 -109058289 - HERVL-A2 LTR ERVL -4339 1315 1 2942 103 10 78 chr2 141629565 141629605 -109058249 - MLT2A2 LTR ERVL 0 453 412 255 61 0 0 chr2 141629605 141629638 -109058216 + (CA)n Simple_repeat Simple_repeat 2 34 0 2942 103 10 78 chr2 141629638 141630083 -109057771 - MLT2A2 LTR ERVL -41 412 1 282 240 40 0 chr2 141630083 141630158 -109057696 - L1M1 LINE L1 -3860 2286 2209 277 185 0 22 chr2 141630226 141630318 -109057536 + (TA)n Simple_repeat Simple_repeat 1 90 0 1727 179 33 38 chr2 141630409 141630801 -109057053 + MLT1B LTR MaLR 1 390 0 259 409 0 0 chr2 141631365 141631453 -109056401 - L2 LINE L2 -198 3074 2987 21 57 0 0 chr2 141633371 141633406 -109054448 + AT_rich Low_complexity Low_complexity 1 35 0 3391 259 50 40 chr2 141633569 141635774 -109052080 - L1 LINE L1 -3222 4343 2225 4865 90 28 17 chr2 141635774 141636488 -109051366 + LTR30 LTR ERV1 1 722 0 3391 259 50 40 chr2 141636488 141636619 -109051235 - L1 LINE L1 -5340 2225 2097 275 331 40 24 chr2 141636939 141637063 -109050791 - L1 LINE L1 -5820 1676 1551 * 615 337 42 40 chr2 141637061 141637438 -109050416 - L1 LINE L1 -5900 1596 1219 434 288 86 26 chr2 141637491 141637804 -109050050 - L1M4 LINE L1 -2123 4023 3692 26 0 0 0 chr2 141638059 141638085 -109049769 + AT_rich Low_complexity Low_complexity 1 26 0 2938 187 130 90 chr2 141638195 141639246 -109048608 + MER52A LTR ERV1 1 1233 -522 256 228 0 87 chr2 141639348 141639440 -109048414 + MER52A LTR ERV1 1283 1366 -389 * 338 284 0 52 chr2 141639409 141639543 -109048311 + LTR28 LTR ERV1 586 712 -308 * 2526 197 0 93 chr2 141639525 141640125 -109047729 + MER52A LTR ERV1 1212 1755 0 251 246 123 49 chr2 141640140 141640343 -109047511 - L1ME LINE L1 -273 5848 5631 1929 179 25 0 chr2 141640515 141640872 -109046982 + MER47A DNA MER2_type 1 366 0 367 268 0 0 chr2 141640912 141640994 -109046860 - Tigger5 DNA MER2_type 0 2323 2242 258 246 46 0 chr2 141641080 141641145 -109046709 + Tigger5 DNA MER2_type 2255 2322 -1 362 222 14 0 chr2 141641147 141641219 -109046635 - Tigger5 DNA MER2_type -2250 73 1 878 285 103 32 chr2 141641259 141641792 -109046062 - L1ME3A LINE L1 -344 5826 5256 1450 155 24 4 chr2 141641840 141642091 -109045763 - Tigger2 DNA MER2_type -11 2707 2452 3301 159 39 87 chr2 141642160 141642934 -109044920 - Tigger2 DNA MER2_type -1981 737 1 975 307 25 22 chr2 141642952 141643552 -109044302 - L1ME3A LINE L1 -920 5226 4625 2401 154 18 20 chr2 141643565 141644005 -109043849 - L1PA16 LINE L1 -9 6157 5719 52 41 0 0 chr2 141644008 141644081 -109043773 + AT_rich Low_complexity Low_complexity 1 73 0 437 261 113 45 chr2 141644215 141644701 -109043153 - L1ME3A LINE L1 -1550 4596 4078 562 268 6 6 chr2 141644755 141644912 -109042942 - L1ME3 LINE L1 -2 6160 6004 393 102 0 0 chr2 141645362 141645421 -109042433 + (CA)n Simple_repeat Simple_repeat 2 60 0 1827 173 0 7 chr2 141645470 141645777 -109042077 - AluJb SINE Alu -7 305 1 4103 78 4 2 chr2 141646326 141646874 -109040980 - L1P LINE L1 -1516 4630 4082 25 51 0 0 chr2 141646890 141646929 -109040925 + AT_rich Low_complexity Low_complexity 1 39 0 329 271 97 14 chr2 141647032 141647274 -109040580 + L1ME LINE L1 807 1062 -5021 686 257 156 38 chr2 141647279 141647784 -109040070 + L1ME LINE L1 4275 4839 -1241 668 89 44 6 chr2 141647786 141647944 -109039910 + (TCTA)n Simple_repeat Simple_repeat 1 164 0 711 211 8 0 chr2 141647944 141648072 -109039782 - AluJo SINE Alu -23 289 161 270 108 0 0 chr2 141648073 141648110 -109039744 - AluJo SINE Alu -178 124 88 861 237 85 34 chr2 141648197 141648843 -109039011 + L1ME LINE L1 4891 5572 -526 320 323 20 7 chr2 141648864 141649075 -109038779 - HERVL LTR ERVL -1349 4344 4062 266 333 45 6 chr2 141649142 141649298 -109038556 - HERVL LTR ERVL -1464 4021 3860 1210 342 63 29 chr2 141649432 141650098 -109037756 - HERVL LTR ERVL -2058 3706 3018 188 299 24 87 chr2 141650148 141650275 -109037579 + L3 LINE CR1 360 478 -1099 573 330 52 26 chr2 141650279 141650646 -109037208 - HERVL LTR ERVL -2228 2768 2385 330 289 52 0 chr2 141650774 141650871 -109036983 + MER5A DNA MER1_type 31 132 -57 1761 34 0 0 chr2 141650871 141651077 -109036777 - L1PA4 LINE L1 -497 5658 5453 4159 24 14 0 chr2 141651077 141651569 -109036285 + L1PA4 LINE L1 5655 6154 -1 287 184 0 0 chr2 141651613 141651662 -109036192 + MER5A DNA MER1_type 125 173 -16 639 325 88 51 chr2 141652094 141652639 -109035215 - HERVL LTR ERVL -3939 1825 1261 320 39 0 59 chr2 141652778 141652829 -109035025 + (TA)n Simple_repeat Simple_repeat 2 49 0 846 284 152 52 chr2 141653192 141653580 -109034274 - LTR33 LTR ERVL -2 519 93 471 297 117 34 chr2 141653695 141654070 -109033784 - L1 LINE L1 -1748 4398 3995 1441 247 38 75 chr2 141654072 141654579 -109033275 - MLT1F1 LTR MaLR 0 567 86 1291 208 161 5 chr2 141654579 141655008 -109032846 + LTR54B LTR ERV1 1 496 -2 1441 247 38 75 chr2 141655008 141655091 -109032763 - MLT1F1 LTR MaLR -481 86 1 589 291 146 25 chr2 141655113 141655832 -109032022 - L1 LINE L1 -2164 3982 3177 33 66 0 0 chr2 141656086 141656147 -109031707 + AT_rich Low_complexity Low_complexity 1 61 0 362 303 158 0 chr2 141656231 141656396 -109031458 + HAL1 LINE L1 1701 1891 -616 2221 117 3 0 chr2 141657916 141658215 -109029639 - AluSx SINE Alu -11 301 2 2488 58 0 0 chr2 141658230 141658525 -109029329 - AluY SINE Alu -16 295 1 21 71 0 0 chr2 141658651 141658693 -109029161 + AT_rich Low_complexity Low_complexity 1 42 0 330 164 0 0 chr2 141659115 141659182 -109028672 + L1PB4 LINE L1 6086 6152 -4 181 200 108 46 chr2 141659230 141659295 -109028559 + L2 LINE L2 3245 3313 0 2331 154 30 30 chr2 141660154 141660588 -109027266 + Tigger2a DNA MER2_type 1 434 0 606 264 88 6 chr2 141660886 141661045 -109026809 + MER5B DNA MER1_type 7 178 0 497 335 37 18 chr2 141663245 141663627 -109024227 - L1MC4a LINE L1 -1884 5924 5536 396 302 13 6 chr2 141663666 141663825 -109024029 + (TA)n Simple_repeat Simple_repeat 2 161 0 387 276 91 53 chr2 141664399 141664642 -109023212 + MIR SINE MIR 5 251 -11 318 344 88 25 chr2 141664696 141664856 -109022998 - MIR SINE MIR -77 185 16 1971 123 3 26 chr2 141665013 141665315 -109022539 + AluSx SINE Alu 1 295 -17 2023 137 3 32 chr2 141666079 141666393 -109021461 - AluSq SINE Alu -8 305 1 3963 130 42 48 chr2 141666609 141666783 -109021071 + MER50 LTR ERV1 1 174 -560 2173 82 3 70 chr2 141666783 141667114 -109020740 + AluY SINE Alu 1 309 -2 3963 130 42 48 chr2 141667114 141667654 -109020200 + MER50 LTR ERV1 174 711 -23 850 262 156 55 chr2 141670601 141671153 -109016701 + Charlie7 DNA MER1_type 1 624 -1988 1944 106 8 0 chr2 141671153 141671407 -109016447 + AluSc SINE Alu 1 256 -53 850 262 156 55 chr2 141671407 141671476 -109016378 + Charlie7 DNA MER1_type 624 685 -1927 22 0 0 0 chr2 141671573 141671595 -109016259 + AT_rich Low_complexity Low_complexity 1 22 0 232 235 52 9 chr2 141672834 141672949 -109014905 + (TA)n Simple_repeat Simple_repeat 2 121 0 227 325 25 16 chr2 141673131 141673313 -109014541 - MIR SINE MIR -6 256 20 217 362 32 0 chr2 141674243 141674337 -109013517 - L3 LINE CR1 -1 1576 1480 11138 198 31 10 chr2 141674341 141679094 -109008760 + L1MA4 LINE L1 2 4852 -1476 1264 215 0 23 chr2 141679094 141679350 -109008504 - AluJb SINE Alu -62 250 1 5512 156 14 37 chr2 141679350 141680381 -109007473 + L1MA4 LINE L1 4838 5813 -669 258 81 0 0 chr2 141680381 141680418 -109007436 + (CA)n Simple_repeat Simple_repeat 2 38 0 5512 156 14 37 chr2 141680418 141681062 -109006792 + L1MA4 LINE L1 5813 6470 -12 21 0 0 0 chr2 141681073 141681094 -109006760 + AT_rich Low_complexity Low_complexity 1 21 0 270 56 0 0 chr2 141681721 141681757 -109006097 + (GA)n Simple_repeat Simple_repeat 1 36 0 1567 196 27 41 chr2 141682357 141682479 -109005375 - MLT1A1 LTR MaLR -2 363 241 1817 143 0 35 chr2 141682479 141682808 -109005046 - AluSx SINE Alu 0 323 5 1567 196 27 41 chr2 141682808 141683052 -109004802 - MLT1A1 LTR MaLR -124 241 1 494 346 51 13 chr2 141683922 141684156 -109003698 - MIR SINE MIR 0 262 20 207 250 0 51 chr2 141685346 141685429 -109002425 + CT-rich Low_complexity Low_complexity 2 129 0 234 311 34 42 chr2 141686976 141687095 -109000759 - L2 LINE L2 -4 3309 3192 239 271 0 0 chr2 141687546 141687605 -109000249 + CT-rich Low_complexity Low_complexity 2 60 0 258 338 113 37 chr2 141687680 141688073 -108999781 - L2 LINE L2 -148 3165 2735 663 270 34 47 chr2 141688403 141688636 -108999218 - MIR SINE MIR 0 262 33 2807 68 6 0 chr2 141688743 141689096 -108998758 - THE1A LTR MaLR 0 355 1 10702 100 34 8 chr2 141689102 141690636 -108997218 - THE1A-int LTR MaLR -6 1574 1 2806 68 0 3 chr2 141690638 141690992 -108996862 - THE1A LTR MaLR -2 353 1 850 159 0 0 chr2 141692179 141692305 -108995549 + FLAM_C SINE Alu 2 127 -6 33 25 0 0 chr2 141692556 141692596 -108995258 + AT_rich Low_complexity Low_complexity 1 40 0 1735 158 53 3 chr2 141693164 141693449 -108994405 + AluSx SINE Alu 1 299 -13 264 320 107 8 chr2 141695506 141695628 -108992226 - MIR SINE MIR -108 154 21 25 31 0 0 chr2 141696941 141696973 -108990881 + AT_rich Low_complexity Low_complexity 1 32 0 339 276 94 24 chr2 141697039 141697166 -108990688 + MIR SINE MIR 10 145 -117 251 371 7 56 chr2 141697259 141697402 -108990452 - MIR3 SINE MIR -54 154 19 25 31 0 0 chr2 141697733 141697765 -108990089 + AT_rich Low_complexity Low_complexity 1 32 0 1787 189 0 0 chr2 141698872 141699169 -108988685 + AluJb SINE Alu 1 297 -15 311 314 8 33 chr2 141700654 141700775 -108987079 + L2 LINE L2 3160 3277 -36 261 288 88 65 chr2 141701031 141701201 -108986653 - MIR SINE MIR -11 251 78 1815 171 29 69 chr2 141701801 141702251 -108985603 + MSTB1 LTR MaLR 1 432 0 3517 259 114 25 chr2 141702278 141702671 -108985183 + MSTB1-int LTR MaLR 224 580 -1071 2403 67 0 6 chr2 141702671 141702984 -108984870 - AluY SINE Alu 0 311 1 3517 259 114 25 chr2 141702984 141703682 -108984172 + MSTB1-int LTR MaLR 580 1413 -238 9188 48 7 1 chr2 141703678 141705616 -108982238 - L1PA6 LINE L1 -1 6153 4209 13738 48 2 2 chr2 141705769 141707517 -108980337 - L1P LINE L1 -1294 4852 3106 1030 174 78 9 chr2 141707502 141707586 -108980268 + MSTB1-int LTR MaLR 1387 1464 -187 * 216 0 0 0 chr2 141707586 141707610 -108980244 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1030 174 78 9 chr2 141707610 141707755 -108980099 + MSTB1-int LTR MaLR 1464 1632 -19 1489 174 59 86 chr2 141707772 141708214 -108979640 + MSTB1 LTR MaLR 1 430 -2 21 36 0 0 chr2 141710406 141710434 -108977420 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr2 141711189 141711231 -108976623 + AT_rich Low_complexity Low_complexity 1 42 0 1717 198 22 16 chr2 141711943 141712306 -108975548 + MLT1A1 LTR MaLR 1 365 0 183 172 103 17 chr2 141715505 141715563 -108972291 + MIR SINE MIR 186 248 -14 219 245 13 155 chr2 141715592 141715747 -108972107 + MIR3 SINE MIR 76 208 0 606 191 134 50 chr2 141716583 141716845 -108971009 + L1MC5 LINE L1 7246 7529 -432 632 320 44 20 chr2 141717361 141717658 -108970196 + MLT1J1 LTR MaLR 15 318 -128 875 229 141 0 chr2 141718359 141718586 -108969268 - MIR SINE MIR -2 260 2 225 262 87 87 chr2 141718590 141718796 -108969058 - MER112 DNA MER1_type -53 207 2 33 0 0 0 chr2 141718925 141718958 -108968896 + AT_rich Low_complexity Low_complexity 1 33 0 301 20 20 61 chr2 141718958 141719007 -108968847 - L1PA3 LINE L1 -5 6150 6104 835 164 4 169 chr2 141719617 141719842 -108968012 + MER5A DNA MER1_type 2 189 0 1587 275 42 47 chr2 141719856 141720700 -108967154 + L2 LINE L2 2330 3166 -147 21 0 0 0 chr2 141720714 141720735 -108967119 + AT_rich Low_complexity Low_complexity 1 21 0 338 345 95 15 chr2 141721311 141721511 -108966343 - MIR SINE MIR -10 252 37 514 277 72 41 chr2 141722329 141722621 -108965233 + L1MC4 LINE L1 7614 7914 -128 200 163 23 0 chr2 141723130 141723173 -108964681 + CT-rich Low_complexity Low_complexity 4 47 0 1072 69 8 0 chr2 141723860 141723991 -108963863 + AluYb8 SINE Alu 3 134 -184 2260 100 3 7 chr2 141723991 141724301 -108963553 + AluSc SINE Alu 1 309 0 261 324 167 0 chr2 141724397 141724505 -108963349 + L2 LINE L2 3138 3263 -9 374 191 206 28 chr2 141724509 141724650 -108963204 - MIR SINE MIR -9 253 88 22 35 0 0 chr2 141724966 141724995 -108962859 + AT_rich Low_complexity Low_complexity 1 29 0 2029 117 53 13 chr2 141725830 141726130 -108961724 - AluSx SINE Alu 0 312 1 259 290 43 11 chr2 141726221 141726314 -108961540 - MIR SINE MIR -122 140 45 1383 201 98 53 chr2 141727097 141727391 -108960463 + MSTD LTR MaLR 1 317 -79 2225 95 3 22 chr2 141727391 141727706 -108960148 + AluSc SINE Alu 1 309 0 1383 201 98 53 chr2 141727706 141727790 -108960064 + MSTD LTR MaLR 317 396 0 5350 135 24 43 chr2 141728320 141729197 -108958657 - Tigger3b DNA MER2_type -1797 1231 339 188 0 74 0 chr2 141729197 141729224 -108958630 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1805 151 0 0 chr2 141729232 141729491 -108958363 - AluSx SINE Alu -41 271 13 5350 135 24 43 chr2 141729491 141729580 -108958274 - Tigger3b DNA MER2_type -2696 332 275 529 184 41 0 chr2 141729579 141729677 -108958177 - Tigger3b DNA MER2_type -1129 102 1 * 270 275 12 12 chr2 141729874 141729954 -108957900 + GA-rich Low_complexity Low_complexity 2 81 0 3187 27 3 0 chr2 141730249 141730625 -108957229 - L1PA2 LINE L1 -440 5715 5339 3869 20 0 9 chr2 141730625 141731079 -108956775 + L1PA2 LINE L1 5703 6155 0 213 283 0 0 chr2 141731085 141731138 -108956716 + GA-rich Low_complexity Low_complexity 4 56 0 243 319 18 9 chr2 141731842 141731955 -108955899 + GA-rich Low_complexity Low_complexity 1 114 0 224 242 0 9 chr2 141733203 141733315 -108954539 + GA-rich Low_complexity Low_complexity 1 111 0 212 282 14 0 chr2 141734181 141734252 -108953602 + (TA)n Simple_repeat Simple_repeat 2 73 0 1434 284 32 8 chr2 141734882 141735470 -108952384 + L1ME2 LINE L1 4280 4881 -1265 822 244 57 73 chr2 141735676 141735992 -108951862 + LTR16A1 LTR ERVL 147 457 0 2225 257 27 24 chr2 141736029 141736971 -108950883 + L1ME2 LINE L1 4995 5937 -227 431 277 84 39 chr2 141736958 141737243 -108950611 + L1ME3 LINE L1 5851 6148 -14 * 208 299 0 0 chr2 141738004 141738081 -108949773 + A-rich Low_complexity Low_complexity 1 77 0 21 0 0 0 chr2 141738959 141738980 -108948874 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 141739144 141739165 -108948689 + (A)n Simple_repeat Simple_repeat 1 21 0 23 54 0 0 chr2 141740694 141740731 -108947123 + AT_rich Low_complexity Low_complexity 1 37 0 1942 129 25 4 chr2 141740878 141741197 -108946657 + AluSp SINE Alu 1 325 0 41098 64 3 1 chr2 141741523 141747613 -108940241 + L1PA5 LINE L1 49 6150 -4 1483 180 13 3 chr2 141748115 141748421 -108939433 + AluYa5 SINE Alu 3 311 0 15599 26 4 2 chr2 141748453 141748770 -108939084 - L1P LINE L1 -2751 3395 3080 2884 13 0 0 chr2 141748770 141749086 -108938768 - AluYb8 SINE Alu -2 316 1 15599 26 4 2 chr2 141749086 141750668 -108937186 - L1P LINE L1 -3066 3080 1493 6848 23 0 1 chr2 141750665 141752045 -108935809 + L1PA3 LINE L1 4669 6047 -108 * 1835 133 10 37 chr2 141752154 141752454 -108935400 - AluSx SINE Alu -19 293 2 24 0 0 0 chr2 141752461 141752485 -108935369 + AT_rich Low_complexity Low_complexity 1 24 0 1257 7 0 0 chr2 141752485 141752624 -108935230 - AluYa5/8 SINE Alu -4 306 168 1776 121 0 100 chr2 141752626 141752965 -108934889 - AluSx SINE Alu -7 305 1 21 57 0 0 chr2 141752965 141753000 -108934854 + AT_rich Low_complexity Low_complexity 1 35 0 2193 158 74 22 chr2 141753246 141753651 -108934203 + MSTB LTR MaLR 1 426 0 447 322 89 7 chr2 141754389 141754659 -108933195 + HAL1 LINE L1 64 355 -2152 192 200 0 0 chr2 141754717 141754757 -108933097 + (TG)n Simple_repeat Simple_repeat 2 41 0 712 240 133 59 chr2 141754773 141755044 -108932810 - MLT2B1 LTR ERVL -64 456 166 295 373 76 22 chr2 141755044 141755229 -108932625 + HAL1 LINE L1 445 639 -1868 358 275 121 13 chr2 141755260 141755409 -108932445 - L1MEc LINE L1 -5040 1344 1180 667 324 79 42 chr2 141755605 141756288 -108931566 - L1MEc LINE L1 -5621 942 235 332 193 168 0 chr2 141756337 141756456 -108931398 + LTR37B LTR ERV1 330 468 0 301 281 20 60 chr2 141756517 141756716 -108931138 + L1MC5 LINE L1 7700 7890 -71 215 328 0 0 chr2 141758357 141758424 -108929430 + (TA)n Simple_repeat Simple_repeat 1 67 0 23 0 0 0 chr2 141758522 141758545 -108929309 + AT_rich Low_complexity Low_complexity 1 23 0 234 284 86 17 chr2 141759050 141759166 -108928688 - MIR SINE MIR -56 206 83 487 291 96 35 chr2 141760415 141760645 -108927209 + MIR SINE MIR 19 262 0 2050 244 100 31 chr2 141762844 141763542 -108924312 + L1ME3A LINE L1 5422 6167 -3 298 355 22 14 chr2 141763637 141763775 -108924079 - L2 LINE L2 -4 3309 3171 1753 73 5 0 chr2 141763970 141764231 -108923623 + AluY SINE Alu 71 311 0 182 313 30 30 chr2 141764518 141764585 -108923269 + L2 LINE L2 1353 1419 -1895 1582 277 55 25 chr2 141764585 141764679 -108923175 + HAL1 LINE L1 1 91 -2416 236 29 0 29 chr2 141764679 141764713 -108923141 + (TAA)n Simple_repeat Simple_repeat 2 34 0 1582 277 55 25 chr2 141764713 141765167 -108922687 + HAL1 LINE L1 91 565 -1942 1355 210 97 30 chr2 141765309 141765680 -108922174 - MLT1D LTR MaLR -108 397 2 334 302 0 54 chr2 141765680 141765719 -108922135 + HAL1 LINE L1 580 620 -1887 2029 148 32 27 chr2 141765719 141766092 -108921762 + THE1C LTR MaLR 1 375 0 334 302 0 54 chr2 141766092 141766201 -108921653 + HAL1 LINE L1 620 720 -1787 1761 298 159 31 chr2 141766245 141767139 -108920715 + L2 LINE L2 1713 2881 -432 1519 156 12 16 chr2 141767139 141767433 -108920421 + AluSx SINE Alu 43 335 0 1761 298 159 31 chr2 141767433 141767791 -108920063 + L2 LINE L2 2881 3192 -121 2225 168 58 19 chr2 141767831 141768298 -108919556 + LTR45B LTR ERV1 10 783 0 215 289 24 48 chr2 141768329 141768412 -108919442 + L2 LINE L2 3231 3311 -2 548 234 35 43 chr2 141768627 141768893 -108918961 + MLT1A2 LTR MaLR 6 311 -117 1365 267 5 34 chr2 141768927 141769335 -108918519 + MSTD LTR MaLR 1 396 0 1971 151 17 31 chr2 141769337 141769694 -108918160 - MLT1B LTR MaLR -19 371 20 333 0 0 0 chr2 141771935 141771972 -108915882 + (CA)n Simple_repeat Simple_repeat 2 38 0 646 200 34 11 chr2 141773855 141774030 -108913824 - L1PA5 LINE L1 -13 6141 5963 41340 67 3 5 chr2 141774317 141780473 -108907381 - L1PA5 LINE L1 -14 6140 2 198 0 0 0 chr2 141784007 141784029 -108903825 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 711 129 9 0 chr2 141784034 141784150 -108903704 - L1PA15 LINE L1 -9 6156 6040 1830 156 16 0 chr2 141785193 141785507 -108902347 + L1MB1 LINE L1 5847 6165 -3 225 0 0 0 chr2 141785698 141785723 -108902131 + (A)n Simple_repeat Simple_repeat 1 25 0 186 103 0 0 chr2 141787561 141787590 -108900264 + (CA)n Simple_repeat Simple_repeat 2 30 0 246 128 0 0 chr2 141788444 141788483 -108899371 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 834 0 82 0 chr2 141788537 141788683 -108899171 + (TA)n Simple_repeat Simple_repeat 2 159 0 221 303 64 55 chr2 141789199 141789308 -108898546 + L2 LINE L2 3158 3267 -5 3522 198 55 38 chr2 141790480 141791676 -108896178 - L1MB7 LINE L1 -85 6597 5364 1432 252 103 21 chr2 141791676 141792141 -108895713 + MLT1D LTR MaLR 1 503 -2 3522 198 55 38 chr2 141792141 141792353 -108895501 - L1MB7 LINE L1 -1318 5364 5157 505 263 8 0 chr2 141792341 141792474 -108895380 - L1MB7 LINE L1 -3359 3285 3152 * 5278 227 53 71 chr2 141792501 141793404 -108894450 - L1MB7 LINE L1 -4570 2076 1159 1382 88 51 0 chr2 141793404 141793620 -108894234 + L1MA5A LINE L1 6071 6297 0 5278 227 53 71 chr2 141793620 141794813 -108893041 - L1MB7 LINE L1 -5487 1159 4 612 238 61 0 chr2 141794813 141794960 -108892894 + MER58A DNA MER1_type 45 200 -24 367 336 0 31 chr2 141797129 141797257 -108890597 + L2 LINE L2 3149 3272 0 584 315 207 12 chr2 141798774 141799199 -108888655 + L2 LINE L2 2804 3311 -2 23 33 0 0 chr2 141800225 141800255 -108887599 + AT_rich Low_complexity Low_complexity 1 30 0 234 0 0 0 chr2 141800738 141800764 -108887090 + (TG)n Simple_repeat Simple_repeat 1 26 0 24 0 0 0 chr2 141801724 141801748 -108886106 + AT_rich Low_complexity Low_complexity 1 24 0 228 209 22 44 chr2 141801769 141801860 -108885994 + L1MC4 LINE L1 6613 6701 -1341 220 225 56 0 chr2 141801861 141801932 -108885922 + (CATATA)n Simple_repeat Simple_repeat 3 77 0 187 175 0 0 chr2 141802623 141802663 -108885191 - L2 LINE L2 -1 3312 3273 229 232 61 37 chr2 141803546 141803628 -108884226 - LTR16A1 LTR ERVL -306 151 68 22 0 0 0 chr2 141805382 141805404 -108882450 + AT_rich Low_complexity Low_complexity 1 22 0 201 129 0 0 chr2 141805488 141805519 -108882335 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 218 391 78 17 chr2 141805678 141805857 -108881997 - L2 LINE L2 -215 3057 2868 234 379 32 0 chr2 141805985 141806080 -108881774 - MER5A DNA MER1_type -85 104 7 324 358 20 20 chr2 141806363 141806511 -108881343 - MIR SINE MIR -80 182 35 532 336 82 30 chr2 141806738 141807238 -108880616 - MLT1K LTR MaLR -23 565 40 232 238 0 0 chr2 141807456 141807498 -108880356 + (CA)n Simple_repeat Simple_repeat 2 43 0 21 89 0 0 chr2 141808001 141808057 -108879797 + AT_rich Low_complexity Low_complexity 1 56 0 2121 135 0 7 chr2 141808059 141808384 -108879470 + AluSx SINE Alu 1 323 0 256 273 20 50 chr2 141810895 141810994 -108876860 + MER5B DNA MER1_type 1 96 -82 276 277 43 21 chr2 141812288 141812382 -108875472 - L2 LINE L2 -4 3268 3173 185 347 145 8 chr2 141812403 141812527 -108875327 - MIR3 SINE MIR -63 145 5 211 302 164 0 chr2 141814316 141814432 -108873422 + MIR SINE MIR 114 248 -14 219 69 0 0 chr2 141814460 141814489 -108873365 + (CAT)n Simple_repeat Simple_repeat 3 31 0 2106 107 3 20 chr2 141815492 141815815 -108872039 - AluSg SINE Alu 0 310 1 31792 78 8 10 chr2 141815823 141820194 -108867660 - HERVL-A2 LTR ERVL -1292 4362 1 3383 83 18 0 chr2 141820194 141820639 -108867215 - MLT2A2 LTR ERVL 0 453 1 22 35 0 0 chr2 141820837 141820866 -108866988 + AT_rich Low_complexity Low_complexity 1 29 0 503 213 33 53 chr2 141821870 141822020 -108865834 + MIR SINE MIR 86 232 -30 1993 161 0 6 chr2 141822087 141822398 -108865456 + AluJb SINE Alu 1 309 -3 616 125 11 0 chr2 141822568 141822656 -108865198 + 5S rRNA rRNA 2 90 -31 324 278 124 24 chr2 141823156 141823325 -108864529 + L1ME LINE L1 946 1131 -5503 468 255 100 21 chr2 141823373 141823615 -108864239 + L1ME LINE L1 1027 1284 -5258 278 286 74 17 chr2 141823644 141823819 -108864035 + L1ME LINE L1 1433 1617 -4925 574 236 68 27 chr2 141823860 141824123 -108863731 + L1ME LINE L1 1595 1868 -4778 * 735 294 65 31 chr2 141824122 141824981 -108862873 + L1ME LINE L1 2111 2966 -3678 367 243 114 21 chr2 141825085 141825225 -108862629 + L1M4b LINE L1 1412 1564 -5295 668 190 17 6 chr2 141825390 141825564 -108862290 + GA-rich Low_complexity Low_complexity 2 177 0 2179 45 7 45 chr2 141826112 141826404 -108861450 + AluY SINE Alu 21 301 -10 560 181 52 0 chr2 141826426 141826542 -108861312 + FRAM SINE Alu 50 171 -5 746 277 42 9 chr2 141826677 141826890 -108860964 - MIR SINE MIR -21 241 22 252 192 8 62 chr2 141826971 141827101 -108860753 + GA-rich Low_complexity Low_complexity 2 124 0 1628 211 57 3 chr2 141828711 141829095 -108858759 + MER74A LTR ERVL 121 525 -33 318 300 193 0 chr2 141829379 141829519 -108858335 + MER5A DNA MER1_type 9 175 -14 324 317 102 27 chr2 141829562 141829748 -108858106 + LTR16B LTR ERVL 110 309 -155 327 179 0 0 chr2 141829751 141829818 -108858036 + CT-rich Low_complexity Low_complexity 4 70 0 2344 97 0 7 chr2 141830727 141831036 -108856818 - AluSc SINE Alu -2 307 1 254 369 47 20 chr2 141831053 141831202 -108856652 - MIR SINE MIR -90 172 20 286 246 149 44 chr2 141831476 141831590 -108856264 + L1ME2 LINE L1 6029 6154 -10 189 154 0 0 chr2 141832380 141832419 -108855435 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 219 114 0 0 chr2 141832428 141832463 -108855391 + (CATA)n Simple_repeat Simple_repeat 3 37 0 447 363 35 5 chr2 141834050 141834251 -108853603 - MIR SINE MIR -19 243 37 237 284 0 30 chr2 141836507 141836574 -108851280 + L2 LINE L2 3244 3308 -5 245 146 21 0 chr2 141837145 141837193 -108850661 + (CA)n Simple_repeat Simple_repeat 2 50 0 331 56 37 0 chr2 141837548 141837602 -108850252 + (TG)n Simple_repeat Simple_repeat 2 57 0 299 343 20 39 chr2 141838426 141838630 -108849224 + MIR3 SINE MIR 7 206 -2 25 65 0 0 chr2 141838797 141838843 -108849011 + AT_rich Low_complexity Low_complexity 1 46 0 27 49 0 0 chr2 141839548 141839589 -108848265 + AT_rich Low_complexity Low_complexity 1 41 0 2200 114 13 3 chr2 141841632 141841940 -108845914 - AluSq SINE Alu -2 311 1 292 326 22 22 chr2 141842015 141842153 -108845701 - MIR SINE MIR -13 249 112 1347 137 8 13 chr2 141844104 141844338 -108843516 + L1MC1 LINE L1 6101 6333 0 2220 105 13 3 chr2 141845330 141845636 -108842218 - AluSc SINE Alu 0 309 1 260 248 44 9 chr2 141846387 141846500 -108841354 + (TA)n Simple_repeat Simple_repeat 2 118 0 2647 13 3 3 chr2 141846718 141847021 -108840833 + AluYa5 SINE Alu 1 303 -8 942 35 0 0 chr2 141847121 141847234 -108840620 + L1PA3 LINE L1 6040 6152 -3 283 321 121 7 chr2 141847487 141847627 -108840227 + L2 LINE L2 2924 3079 -193 198 0 0 0 chr2 141847659 141847681 -108840173 + (TAAAA)n Simple_repeat Simple_repeat 3 24 0 583 306 16 16 chr2 141847869 141848052 -108839802 + MIR SINE MIR 29 211 -51 458 231 0 81 chr2 141848741 141848914 -108838940 - MER103 DNA DNA -2 164 6 2235 91 0 23 chr2 141849053 141849361 -108838493 - AluYa5 SINE Alu -10 301 1 775 309 5 0 chr2 141849528 141849745 -108838109 + MER58A DNA MER1_type 4 221 -3 894 236 89 81 chr2 141850027 141850375 -108837479 - MLT1A1 LTR MaLR -1 364 14 12798 201 49 15 chr2 141851012 141854415 -108833439 + L1MA4A LINE L1 6 3523 -3325 1327 107 151 10 chr2 141854416 141854621 -108833233 + AluSg SINE Alu 1 234 -76 4752 173 30 17 chr2 141854623 141856054 -108831800 + L1MA4A LINE L1 5542 6994 -11 185 308 178 12 chr2 141856364 141856533 -108831321 - MIR SINE MIR -1 261 65 3845 214 60 39 chr2 141857374 141857784 -108830070 + Charlie1a DNA MER1_type 2 402 -2359 1743 83 48 0 chr2 141857784 141858012 -108829842 + AluY SINE Alu 37 275 -36 237 65 0 0 chr2 141858019 141858050 -108829804 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 3845 214 60 39 chr2 141858050 141858974 -108828880 + Charlie1a DNA MER1_type 407 1454 -1 894 305 59 24 chr2 141859433 141860001 -108827853 + MER115 DNA AcHobo 68 693 0 2165 139 0 3 chr2 141860035 141860345 -108827509 + AluSx SINE Alu 1 309 -3 345 307 11 57 chr2 141860457 141860633 -108827221 - Charlie8 DNA MER1_type -2244 173 6 22 0 0 0 chr2 141863598 141863620 -108824234 + AT_rich Low_complexity Low_complexity 1 22 0 416 250 67 0 chr2 141863758 141863878 -108823976 + MER5A DNA MER1_type 8 135 -54 875 289 85 30 chr2 141864114 141864550 -108823304 + MLT1L LTR MaLR 148 607 -8 1472 82 64 23 chr2 141864647 141864867 -108822987 + MER30 DNA MER1_type 2 230 0 491 258 80 6 chr2 141865732 141865895 -108821959 - MER5B DNA MER1_type 0 178 4 234 0 0 0 chr2 141866482 141866508 -108821346 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 972 304 106 7 chr2 141866560 141866965 -108820889 + LTR16C LTR ERVL 47 491 0 2730 197 107 3 chr2 141867078 141867686 -108820168 + LTR51 LTR ERV1 1 671 0 557 151 12 0 chr2 141868189 141868275 -108819579 - Tigger7 DNA MER2_type -5 2486 2400 * 1722 139 4 11 chr2 141868269 141868550 -108819304 - Tigger7 DNA MER2_type -208 525 247 733 233 77 70 chr2 141868557 141868999 -108818855 - LTR56 LTR ERV1 0 445 1 * 1254 226 56 0 chr2 141868999 141869248 -108818606 - Tigger7 DNA MER2_type -469 264 2 1597 249 46 62 chr2 141869975 141870537 -108817317 + L1ME3A LINE L1 5591 6143 -27 323 254 15 0 chr2 141871083 141871150 -108816704 + MIR SINE MIR 83 150 -58 185 367 11 22 chr2 141871372 141871462 -108816392 + MER5A DNA MER1_type 63 151 -38 2103 133 7 0 chr2 141871576 141871870 -108815984 - AluSx SINE Alu -14 298 3 7845 129 8 18 chr2 141872146 141873451 -108814403 + HSMAR2 DNA Mariner 3 1293 -9 2222 68 58 0 chr2 141874227 141874519 -108813335 - AluY SINE Alu -2 309 1 23 33 0 0 chr2 141874983 141875013 -108812841 + AT_rich Low_complexity Low_complexity 1 30 0 20016 45 1 2 chr2 141875517 141878802 -108809052 + L1P LINE L1 1 3410 -2736 242 83 0 0 chr2 141878902 141878938 -108808916 + HSMAR2 DNA Mariner 1265 1300 -2 633 90 0 0 chr2 141882263 141882352 -108805502 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 3293 172 22 18 chr2 141882486 141883115 -108804739 + L1MA7 LINE L1 5509 6140 -151 1571 87 22 4 chr2 141883115 141883346 -108804508 + AluY SINE Alu 1 235 -76 14524 70 1 0 chr2 141883448 141886208 -108801646 + L1PA6 LINE L1 3390 6154 0 181 206 0 0 chr2 141886218 141886252 -108801602 + MIR SINE MIR 117 150 -112 384 302 43 43 chr2 141886998 141887137 -108800717 + MIR3 SINE MIR 11 149 -59 235 265 0 0 chr2 141887343 141887392 -108800462 + L3 LINE CR1 1523 1571 -6 1280 212 13 65 chr2 141887406 141887792 -108800062 - MLT1A2 LTR MaLR -4 370 5 6416 133 93 131 chr2 141888251 141890016 -108797838 + pTR5 LTR ERV1 742 2438 0 7067 124 54 13 chr2 141890019 141890746 -108797108 - THE1C-int LTR MaLR -442 1138 350 1956 157 0 3 chr2 141890746 141891045 -108796809 + AluSg SINE Alu 1 298 -12 7067 124 54 13 chr2 141891045 141891410 -108796444 - THE1C-int LTR MaLR -1230 350 1 2138 117 61 19 chr2 141891410 141891770 -108796084 - THE1C LTR MaLR 0 375 1 186 43 0 0 chr2 141892121 141892144 -108795710 + (TTG)n Simple_repeat Simple_repeat 2 24 0 341 297 14 20 chr2 141892814 141892962 -108794892 + GA-rich Low_complexity Low_complexity 3 149 0 329 304 93 47 chr2 141894316 141894530 -108793324 + MLT1L LTR MaLR 152 375 -240 428 294 48 48 chr2 141894738 141894797 -108793057 - MIR SINE MIR -11 251 193 243 79 0 0 chr2 141894797 141894835 -108793019 + (TG)n Simple_repeat Simple_repeat 1 38 0 428 294 48 48 chr2 141894835 141894962 -108792892 - MIR SINE MIR -68 194 65 201 329 37 24 chr2 141896103 141896185 -108791669 - L2 LINE L2 0 3272 3190 180 310 0 17 chr2 141896793 141896851 -108791003 - MIR SINE MIR -178 84 28 602 301 81 0 chr2 141897790 141897999 -108789855 + MIR SINE MIR 17 242 -20 206 343 37 19 chr2 141898011 141898119 -108789735 - MIR SINE MIR -26 236 127 424 288 72 7 chr2 141899283 141899436 -108788418 - MIR SINE MIR -18 244 82 265 358 79 12 chr2 141899493 141899658 -108788196 - L2 LINE L2 -181 3091 2916 462 307 97 56 chr2 141900247 141900732 -108787122 - MLT1J LTR MaLR -3 508 4 1175 72 39 0 chr2 141901481 141901634 -108786220 + AluSq SINE Alu 150 308 -5 322 333 16 23 chr2 141901641 141901770 -108786084 - MIR SINE MIR -115 147 20 534 300 66 35 chr2 141902012 141902369 -108785485 + MLT1K LTR MaLR 200 586 -2 1609 155 0 43 chr2 141902494 141902772 -108785082 - AluJo SINE Alu -30 282 17 457 111 14 0 chr2 141903085 141903157 -108784697 + AluS SINE Alu 231 303 -9 525 181 43 0 chr2 141903157 141903273 -108784581 + L1MA7 LINE L1 6131 6251 -40 21 36 0 0 chr2 141903290 141903318 -108784536 + AT_rich Low_complexity Low_complexity 1 28 0 258 164 0 0 chr2 141905111 141905166 -108782688 + (TA)n Simple_repeat Simple_repeat 2 56 0 331 344 99 0 chr2 141906288 141906500 -108781354 + L2 LINE L2 2194 2426 -888 1995 198 68 92 chr2 141906501 141907134 -108780720 + MLT1E1 LTR MaLR 33 650 -4 237 366 53 45 chr2 141907136 141907491 -108780363 + L2 LINE L2 2432 2789 -525 279 234 234 0 chr2 141907539 141907633 -108780221 + MER5B DNA MER1_type 1 116 -62 2110 51 44 11 chr2 141907641 141907957 -108779897 - AluY SINE Alu 0 325 1 379 346 120 42 chr2 141908114 141908707 -108779147 + L2 LINE L2 1008 1646 -1668 6113 134 31 10 chr2 141910581 141911931 -108775923 - L1MA4 LINE L1 -7 6293 4921 1152 243 98 37 chr2 141913709 141914088 -108773766 + MLT1I LTR MaLR 5 406 -3 27 0 0 0 chr2 141914287 141914314 -108773540 + AT_rich Low_complexity Low_complexity 1 27 0 344 350 17 0 chr2 141914781 141914898 -108772956 + L2 LINE L2 2555 2673 -641 192 158 0 0 chr2 141915731 141915769 -108772085 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 773 188 30 12 chr2 141915788 141915953 -108771901 + Charlie8 DNA MER1_type 107 274 -2143 230 237 72 52 chr2 141916191 141916288 -108771566 - MER69 DNA AcHobo -2 2524 2426 21 0 0 0 chr2 141917056 141917077 -108770777 + AT_rich Low_complexity Low_complexity 1 21 0 1299 184 67 105 chr2 141917243 141917721 -108770133 - MLT1C LTR MaLR -2 465 6 867 225 22 6 chr2 141917883 141918065 -108769789 + MER58A DNA MER1_type 24 208 -16 353 291 146 0 chr2 141918067 141918170 -108769684 + MIR SINE MIR 133 250 -12 228 286 62 54 chr2 141918197 141918309 -108769545 + MIR SINE MIR 1 113 -149 27 0 0 0 chr2 141918434 141918461 -108769393 + GC_rich Low_complexity Low_complexity 1 27 0 342 127 0 0 chr2 141918461 141918532 -108769322 + (G)n Simple_repeat Simple_repeat 1 71 0 25 51 0 0 chr2 141918532 141918571 -108769283 + GC_rich Low_complexity Low_complexity 1 39 0 181 357 27 0 chr2 141918626 141918738 -108769116 + MIR SINE MIR 76 190 -72 631 316 73 44 chr2 141920817 141921439 -108766415 + L2 LINE L2 2420 3053 -219 968 206 86 27 chr2 141921441 141921698 -108766156 + MLT1D LTR MaLR 224 495 -10 204 339 113 40 chr2 141921775 141921899 -108765955 + L2 LINE L2 3138 3270 -2 188 188 42 0 chr2 141921937 141921985 -108765869 + GA-rich Low_complexity Low_complexity 5 54 0 36 40 0 0 chr2 141922307 141922357 -108765497 + AT_rich Low_complexity Low_complexity 1 50 0 317 272 15 125 chr2 141924265 141924401 -108763453 - L2 LINE L2 -1 3271 3151 2237 135 11 6 chr2 141925259 141925621 -108762233 - L1PB1 LINE L1 -3 6148 5785 572 188 0 38 chr2 141925643 141925829 -108762025 + (TA)n Simple_repeat Simple_repeat 2 180 0 1334 110 0 0 chr2 141925829 141926029 -108761825 - L1PB1 LINE L1 -360 5791 5592 1007 182 14 37 chr2 141926295 141926509 -108761345 - MER20 DNA MER1_type -5 214 6 223 336 35 43 chr2 141926538 141926654 -108761200 + MER5A DNA MER1_type 57 171 -18 24 0 0 0 chr2 141926970 141926994 -108760860 + AT_rich Low_complexity Low_complexity 1 24 0 2015 118 14 7 chr2 141927434 141927723 -108760131 - AluSq SINE Alu -11 302 12 31 58 0 0 chr2 141927736 141927788 -108760066 + AT_rich Low_complexity Low_complexity 1 52 0 208 328 16 0 chr2 141928029 141928093 -108759761 + MIR SINE MIR 81 145 -63 231 114 0 0 chr2 141928614 141928649 -108759205 + (A)n Simple_repeat Simple_repeat 1 35 0 3281 251 160 47 chr2 141929285 141930776 -108757078 + L1M2 LINE L1 803 2461 -4388 1838 169 3 3 chr2 141930776 141931072 -108756782 + AluSx SINE Alu 1 296 -16 25583 57 43 3 chr2 141931077 141934475 -108753379 + L1P LINE L1 2 3533 -2613 1863 102 85 3 chr2 141935383 141935666 -108752188 + AluY SINE Alu 1 306 -5 21 0 0 0 chr2 141936117 141936138 -108751716 + AT_rich Low_complexity Low_complexity 1 21 0 292 283 120 0 chr2 141936731 141936823 -108751031 - MIR SINE MIR -109 153 51 180 0 0 0 chr2 141936959 141936979 -108750875 + (TA)n Simple_repeat Simple_repeat 2 21 0 25 51 0 0 chr2 141938201 141938240 -108749614 + AT_rich Low_complexity Low_complexity 1 39 0 2234 92 20 0 chr2 141939658 141939950 -108747904 - AluSq SINE Alu -15 298 1 27797 35 1 1 chr2 141940185 141944371 -108743483 + L1PA3 LINE L1 1968 6154 -1 25 0 0 0 chr2 141944371 141944396 -108743458 + AT_rich Low_complexity Low_complexity 1 25 0 308 271 51 89 chr2 141944416 141944630 -108743224 + L1ME4a LINE L1 5170 5375 -771 468 313 83 11 chr2 141944640 141944918 -108742936 + L1ME4a LINE L1 5402 5699 -422 322 235 34 78 chr2 141945068 141945247 -108742607 + L1ME4a LINE L1 5951 6121 0 207 176 0 0 chr2 141947337 141947371 -108740483 + (ATG)n Simple_repeat Simple_repeat 3 36 0 1860 241 191 7 chr2 141947485 141947556 -108740298 + MLT2F LTR ERVL 1 58 -605 2952 152 45 34 chr2 141947556 141948150 -108739704 + MER7C DNA MER2_type 2 602 0 1860 241 191 7 chr2 141948150 141948638 -108739216 + MLT2F LTR ERVL 58 663 0 400 298 0 8 chr2 141948677 141948801 -108739053 + HAL1 LINE L1 1560 1682 -825 21 57 0 0 chr2 141949432 141949467 -108738387 + AT_rich Low_complexity Low_complexity 1 35 0 265 376 26 0 chr2 141949467 141949584 -108738270 + L2 LINE L2 3194 3313 0 2919 47 8 0 chr2 141949699 141950061 -108737793 + L1PA7 LINE L1 5782 6146 -8 612 98 0 0 chr2 141950115 141950217 -108737637 + (TA)n Simple_repeat Simple_repeat 1 102 0 22 0 0 0 chr2 141950494 141950516 -108737338 + AT_rich Low_complexity Low_complexity 1 22 0 638 258 6 18 chr2 141950556 141950719 -108737135 + AluJo SINE Alu 1 161 -151 289 261 34 0 chr2 141950840 141950928 -108736926 + MIR SINE MIR 172 262 0 27 0 0 0 chr2 141950987 141951014 -108736840 + AT_rich Low_complexity Low_complexity 1 27 0 1194 320 109 21 chr2 141952726 141953379 -108734475 + L3 LINE CR1 241 950 -627 2037 128 10 0 chr2 141953508 141953804 -108734050 + AluSx SINE Alu 5 303 -9 475 319 104 31 chr2 141953903 141954191 -108733663 + L2 LINE L2 3005 3313 0 275 292 36 60 chr2 141954560 141954728 -108733126 + L3 LINE CR1 1112 1275 -302 2162 121 0 0 chr2 141954741 141955047 -108732807 - AluSc SINE Alu -3 306 1 24 0 0 0 chr2 141955056 141955080 -108732774 + AT_rich Low_complexity Low_complexity 1 24 0 4567 132 42 13 chr2 141955409 141956166 -108731688 + MER4E LTR ERV1 1 779 0 195 389 53 9 chr2 141956389 141956502 -108731352 + L2 LINE L2 2625 2742 -572 22 0 0 0 chr2 141956880 141956902 -108730952 + AT_rich Low_complexity Low_complexity 1 22 0 1774 174 0 17 chr2 141956902 141957196 -108730658 - AluJo SINE Alu -23 289 1 263 297 11 11 chr2 141957668 141957759 -108730095 + (TA)n Simple_repeat Simple_repeat 1 91 0 3505 211 45 23 chr2 141957820 141958034 -108729820 - L1MB8 LINE L1 -1 6177 5969 1484 195 32 62 chr2 141958034 141958408 -108729446 - MLT1A1 LTR MaLR 0 365 3 3505 211 45 23 chr2 141958408 141959163 -108728691 - L1MB8 LINE L1 -209 5969 5188 * 5807 181 37 35 chr2 141959157 141961469 -108726385 - L1MA9 LINE L1 0 6312 3989 775 183 10 81 chr2 141961504 141961639 -108726215 + MER2 DNA MER2_type 13 131 -214 2195 120 3 0 chr2 141961639 141961947 -108725907 + AluSx SINE Alu 1 309 -3 775 183 10 81 chr2 141961947 141962008 -108725846 + MER2 DNA MER2_type 131 195 -150 2264 77 0 3 chr2 141962029 141962365 -108725489 - AluY SINE Alu 0 335 1 1679 160 9 26 chr2 141962439 141962783 -108725071 - L1MA9 LINE L1 -2169 3977 3640 3776 221 23 36 chr2 141962795 141963938 -108723916 - L1MB8 LINE L1 -954 5192 4065 28 0 0 0 chr2 141964035 141964063 -108723791 + AT_rich Low_complexity Low_complexity 1 28 0 318 250 52 0 chr2 141965143 141965239 -108722615 + MLT1D LTR MaLR 3 103 -402 1424 112 68 8 chr2 141965253 141965502 -108722352 + MER21A LTR ERV1 1 264 -667 2753 149 62 34 chr2 141965507 141966042 -108721812 + MER21A LTR ERV1 376 925 -6 962 258 57 32 chr2 141966049 141966421 -108721433 + MLT1D LTR MaLR 125 505 0 202 374 65 26 chr2 141966482 141966637 -108721217 - L2 LINE L2 -21 3251 3091 1949 144 44 0 chr2 141966977 141967318 -108720536 + L1MA4 LINE L1 5423 5778 -522 2159 171 58 17 chr2 141967325 141967815 -108720039 + LTR27 LTR ERV1 12 1225 -141 339 216 0 14 chr2 141967861 141967935 -108719919 + LTR28 LTR ERV1 948 1020 0 2265 161 56 16 chr2 141967935 141967947 -108719907 + L1MA4 LINE L1 5773 5783 -517 1945 160 0 0 chr2 141967947 141968241 -108719613 + AluSx SINE Alu 1 294 -18 2265 161 56 16 chr2 141968241 141968732 -108719122 + L1MA4 LINE L1 5783 6296 -4 289 354 94 16 chr2 141968732 141968986 -108718868 - L2 LINE L2 -491 2823 2550 1487 160 73 44 chr2 141969422 141969727 -108718127 + AluJo SINE Alu 1 313 0 370 365 118 7 chr2 141970528 141970816 -108717038 - L2 LINE L2 -1 3271 2952 680 232 58 88 chr2 141971065 141971393 -108716461 - L2 LINE L2 0 3313 2996 225 0 0 0 chr2 141971465 141971490 -108716364 + (A)n Simple_repeat Simple_repeat 1 25 0 21 71 0 0 chr2 141971693 141971735 -108716119 + AT_rich Low_complexity Low_complexity 1 42 0 2168 141 0 0 chr2 141972083 141972381 -108715473 - AluSx SINE Alu -14 298 1 204 315 0 0 chr2 141972408 141972435 -108715419 + (CATATA)n Simple_repeat Simple_repeat 4 30 -46 1663 180 4 7 chr2 141972435 141972713 -108715141 - AluJo SINE Alu -30 282 6 204 315 0 0 chr2 141972713 141972758 -108715096 + (CATATA)n Simple_repeat Simple_repeat 29 76 0 443 352 131 19 chr2 141973174 141973858 -108713996 + L2 LINE L2 2509 3272 0 180 111 0 0 chr2 141974248 141974275 -108713579 + (A)n Simple_repeat Simple_repeat 1 27 0 2360 91 13 0 chr2 141974527 141974836 -108713018 - AluSp SINE Alu 0 313 1 2170 139 0 0 chr2 141976584 141976887 -108710967 + AluSx SINE Alu 1 303 -9 197 354 39 0 chr2 141977088 141977218 -108710636 + L2 LINE L2 1758 1892 -1422 3997 24 0 0 chr2 141977384 141977849 -108710005 + L1PA2 LINE L1 5690 6154 -1 11577 198 46 21 chr2 141977868 141979308 -108708546 + L1MA4A LINE L1 1844 3246 -3057 2071 136 3 3 chr2 141979308 141979603 -108708251 - AluSg SINE Alu -15 295 1 11577 198 46 21 chr2 141979603 141981769 -108706085 + L1MA4A LINE L1 3246 5510 -793 278 65 0 22 chr2 141981769 141981815 -108706039 + (TA)n Simple_repeat Simple_repeat 2 46 0 11577 198 46 21 chr2 141981815 141982626 -108705228 + L1MA4A LINE L1 5510 6299 -4 256 313 188 0 chr2 141982666 141982794 -108705060 + MIR SINE MIR 84 235 -27 216 308 9 47 chr2 141984649 141984756 -108703098 - L2 LINE L2 -10 3303 3201 1151 304 96 28 chr2 141985034 141985682 -108702172 - MER115 DNA AcHobo 0 693 2 468 229 28 0 chr2 141987034 141987143 -108700711 - MLT1D LTR MaLR 0 505 394 2358 120 16 67 chr2 141987148 141987524 -108700330 - LTR18A LTR ERVL 0 357 1 364 217 43 0 chr2 141987590 141987682 -108700172 - HERVL18 LTR ERVL 0 6047 5952 317 237 0 0 chr2 141987689 141987748 -108700106 - HERVL18 LTR ERVL -780 5267 5209 598 129 21 0 chr2 141987748 141987841 -108700013 - HERVL18 LTR ERVL -1559 4488 4394 5404 150 1 2 chr2 141987844 141988704 -108699150 - HERVL18 LTR ERVL -2469 3578 2720 1123 147 53 2 chr2 141988703 141988966 -108698888 - HERVL18 LTR ERVL -3595 2452 2119 * 2193 218 22 9 chr2 141988998 141989457 -108698397 - HERVL18 LTR ERVL -4433 1614 1150 2174 218 7 20 chr2 141989447 141989905 -108697949 - HERVL18 LTR ERVL -5587 460 9 * 2363 122 16 67 chr2 141989919 141990295 -108697559 - LTR18A LTR ERVL 0 357 1 558 261 22 6 chr2 141990298 141990478 -108697376 - MLT1D LTR MaLR -115 390 208 1034 199 45 32 chr2 141990656 141990877 -108696977 - AluJb SINE Alu -88 224 1 685 132 132 0 chr2 141992956 141993083 -108694771 + L1MB7 LINE L1 6001 6153 -31 2094 141 0 0 chr2 141993083 141993373 -108694481 + AluSg SINE Alu 3 292 -18 685 132 132 0 chr2 141993373 141993397 -108694457 + L1MB7 LINE L1 6153 6172 -12 297 298 125 24 chr2 141996056 141996224 -108691630 + MIR3 SINE MIR 13 197 -11 563 281 67 16 chr2 141996486 141996739 -108691115 + HAL1 LINE L1 1 266 -2241 183 80 0 0 chr2 141996828 141996853 -108691001 + (TCCC)n Simple_repeat Simple_repeat 1 25 0 7215 26 0 0 chr2 141996920 141998320 -108689534 + L1PA3 LINE L1 4768 6167 0 2075 132 51 0 chr2 141998320 141998653 -108689201 + MER4D LTR ERV1 526 875 -28 252 0 0 0 chr2 141998653 141998681 -108689173 + (A)n Simple_repeat Simple_repeat 1 28 0 1081 303 103 19 chr2 141998747 141999552 -108688302 + HAL1 LINE L1 559 1431 -1076 996 256 179 42 chr2 141999578 142000235 -108687619 + HAL1 LINE L1 1518 2324 -183 2071 149 0 0 chr2 142000235 142000530 -108687324 + AluSx SINE Alu 1 295 -17 996 256 179 42 chr2 142000530 142000743 -108687111 + HAL1 LINE L1 2324 2507 0 223 309 103 31 chr2 142001059 142001156 -108686698 - L2 LINE L2 0 3272 3169 22 0 0 0 chr2 142001831 142001853 -108686001 + AT_rich Low_complexity Low_complexity 1 22 0 37728 75 5 7 chr2 142002841 142008524 -108679330 - L1P1 LINE L1 -475 5680 11 260 246 0 46 chr2 142009968 142010033 -108677821 - L2 LINE L2 -7 3265 3204 183 42 0 0 chr2 142011338 142011362 -108676492 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 594 28 0 0 chr2 142011766 142011838 -108676016 + (TG)n Simple_repeat Simple_repeat 2 73 0 238 313 69 21 chr2 142012042 142012288 -108675566 - MLT1F LTR MaLR -230 319 21 460 309 60 6 chr2 142012901 142013069 -108674785 - MIR SINE MIR -51 211 35 21 0 0 0 chr2 142014196 142014217 -108673637 + AT_rich Low_complexity Low_complexity 1 21 0 238 356 43 17 chr2 142014533 142014648 -108673206 - L2 LINE L2 -56 3216 3099 23 0 0 0 chr2 142015853 142015876 -108671978 + AT_rich Low_complexity Low_complexity 1 23 0 213 39 0 0 chr2 142016591 142016617 -108671237 + (TCC)n Simple_repeat Simple_repeat 1 26 0 1371 146 50 0 chr2 142016699 142016918 -108670936 + MER30 DNA MER1_type 1 230 0 1218 332 59 42 chr2 142017582 142018435 -108669419 + L2 LINE L2 2111 2977 -337 195 100 0 0 chr2 142020039 142020069 -108667785 + (A)n Simple_repeat Simple_repeat 1 30 0 180 0 0 0 chr2 142021197 142021217 -108666637 + (A)n Simple_repeat Simple_repeat 1 20 0 271 190 17 0 chr2 142021621 142021679 -108666175 - MER58A DNA MER1_type 0 224 166 1709 174 19 24 chr2 142021679 142022029 -108665825 + L1MB2 LINE L1 5486 5822 -374 246 62 0 0 chr2 142022262 142022294 -108665560 + (GA)n Simple_repeat Simple_repeat 1 32 0 1438 207 52 6 chr2 142022326 142022688 -108665166 + L1MB2 LINE L1 5793 6171 0 233 260 0 0 chr2 142022861 142022911 -108664943 + (TG)n Simple_repeat Simple_repeat 1 50 0 315 367 73 27 chr2 142023215 142023474 -108664380 - HAL1 LINE L1 -743 1764 1494 1372 117 29 19 chr2 142024506 142024712 -108663142 - MER1B DNA MER1_type 0 339 132 357 225 11 11 chr2 142025167 142025256 -108662598 + MER20 DNA MER1_type 131 219 0 7715 175 30 48 chr2 142025296 142026035 -108661819 + L1MA7 LINE L1 3303 4054 -2237 261 0 0 0 chr2 142026035 142026064 -108661790 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7715 175 30 48 chr2 142026064 142028452 -108659402 + L1MA7 LINE L1 4054 6291 0 398 313 125 28 chr2 142030369 142030585 -108657269 + MLT1H1 LTR MaLR 66 296 -294 299 263 169 12 chr2 142030648 142030808 -108657046 + MLT1H1 LTR MaLR 378 562 -5 3034 213 66 22 chr2 142030860 142031674 -108656180 + L1MC4a LINE L1 6861 7710 -98 22 56 0 0 chr2 142031676 142031712 -108656142 + AT_rich Low_complexity Low_complexity 1 36 0 229 245 106 0 chr2 142031743 142031837 -108656017 + L1MD3 LINE L1 7881 7984 -11 1740 133 75 42 chr2 142033771 142034131 -108653723 - THE1C LTR MaLR 0 375 4 435 83 0 0 chr2 142034677 142034737 -108653117 + (GA)n Simple_repeat Simple_repeat 1 60 0 703 293 73 0 chr2 142034762 142034953 -108652901 + MER58A DNA MER1_type 20 224 0 493 300 42 67 chr2 142035283 142035604 -108652250 - L2 LINE L2 -334 2979 2662 2045 138 81 3 chr2 142035926 142036274 -108651580 - THE1C LTR MaLR 0 375 1 2495 126 8 10 chr2 142036274 142036662 -108651192 - THE1C-int LTR MaLR 0 1580 1194 22 0 0 0 chr2 142036804 142036826 -108651028 + AT_rich Low_complexity Low_complexity 1 22 0 1413 179 3 74 chr2 142036866 142037191 -108650663 + AluJo SINE Alu 1 302 -10 1541 274 248 53 chr2 142037388 142038855 -108648999 + L2 LINE L2 1561 3303 -10 186 167 0 0 chr2 142039683 142039719 -108648135 + (CA)n Simple_repeat Simple_repeat 2 37 0 460 83 0 0 chr2 142040631 142040691 -108647163 - THE1A LTR MaLR -295 60 1 11421 95 20 1 chr2 142040692 142042238 -108645616 - THE1A-int LTR MaLR -1 1579 5 2365 106 3 26 chr2 142042242 142042590 -108645264 - THE1A LTR MaLR 0 355 16 865 198 6 11 chr2 142042874 142043051 -108644803 - FRAM SINE Alu 0 176 1 2147 128 0 0 chr2 142044414 142044711 -108643143 + AluSc SINE Alu 1 297 -12 259 355 79 33 chr2 142045297 142045354 -108642500 - L2 LINE L2 -3 3269 3216 1505 158 107 32 chr2 142045354 142045579 -108642275 - MER44D DNA MER2_type -1886 605 398 2374 107 0 0 chr2 142045579 142045887 -108641967 - AluSq SINE Alu -5 308 1 1505 158 107 32 chr2 142045887 142045971 -108641883 - MER44D DNA MER2_type -2093 398 3 259 355 79 33 chr2 142045971 142046065 -108641789 - L2 LINE L2 -56 3216 3111 287 261 0 0 chr2 142046638 142046707 -108641147 + GA-rich Low_complexity Low_complexity 4 72 0 1577 199 17 3 chr2 142046751 142047043 -108640811 + AluJb SINE Alu 3 298 -14 543 202 10 19 chr2 142048152 142048256 -108639598 - MER20 DNA MER1_type -115 104 2 195 355 36 45 chr2 142048720 142048830 -108639024 - L2 LINE L2 -4 3309 3201 1870 102 81 3 chr2 142049799 142050082 -108637772 + AluY SINE Alu 1 305 -6 21 0 0 0 chr2 142050533 142050554 -108637300 + AT_rich Low_complexity Low_complexity 1 21 0 308 290 108 0 chr2 142051147 142051240 -108636614 - MIR SINE MIR -109 153 51 180 0 0 0 chr2 142051375 142051395 -108636459 + (TA)n Simple_repeat Simple_repeat 2 21 0 25 51 0 0 chr2 142052617 142052656 -108635198 + AT_rich Low_complexity Low_complexity 1 39 0 2234 92 20 0 chr2 142054074 142054366 -108633488 - AluSq SINE Alu -15 298 1 27584 38 3 1 chr2 142054602 142058780 -108629074 + L1PA4 LINE L1 1968 6155 0 183 42 0 0 chr2 142058812 142058836 -108629018 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 246 345 15 60 chr2 142060073 142060273 -108627581 + L1MEd LINE L1 355 545 -5574 367 220 29 44 chr2 142060309 142060423 -108627431 - MLT1D LTR MaLR -356 111 5 1623 192 10 34 chr2 142060642 142060934 -108626920 - AluJo SINE Alu -27 285 1 1091 283 87 42 chr2 142061165 142061970 -108625884 - HAL1 LINE L1 -292 2215 1375 264 315 67 51 chr2 142062093 142062347 -108625507 - HAL1 LINE L1 -1932 575 318 213 313 30 0 chr2 142063069 142063136 -108624718 + MER91B DNA MER1_type 50 118 -72 290 310 11 0 chr2 142063157 142063244 -108624610 + MER91B DNA MER1_type 84 171 -19 23 0 0 0 chr2 142067015 142067038 -108620816 + AT_rich Low_complexity Low_complexity 1 23 0 405 0 0 0 chr2 142067117 142067162 -108620692 + (TG)n Simple_repeat Simple_repeat 2 46 0 329 101 93 0 chr2 142068674 142068813 -108619041 + (TA)n Simple_repeat Simple_repeat 2 153 0 520 251 60 68 chr2 142069116 142069351 -108618503 - HAL1 LINE L1 -7 2500 2268 1001 288 91 45 chr2 142069801 142070287 -108617567 + LTR33 LTR ERVL 1 508 -13 217 250 17 17 chr2 142070771 142070831 -108617023 + (CA)n Simple_repeat Simple_repeat 2 61 0 183 129 0 0 chr2 142071124 142071155 -108616699 + (TG)n Simple_repeat Simple_repeat 2 32 0 2809 79 3 0 chr2 142071354 142071722 -108616132 + MER41A LTR ERV1 1 369 -185 2383 68 3 0 chr2 142071724 142072033 -108615821 + L1PA6 LINE L1 5845 6154 0 241 204 0 0 chr2 142072040 142072084 -108615770 + MER41B LTR ERV1 590 633 -2 378 300 59 29 chr2 142072415 142072594 -108615260 - MIR SINE MIR -25 237 56 443 361 44 0 chr2 142073831 142074011 -108613843 + MIR SINE MIR 43 230 -32 432 313 8 0 chr2 142074281 142074412 -108613442 - MER94 DNA DNA 0 134 3 3194 44 1 4 chr2 142074573 142074986 -108612868 - L1PA3 LINE L1 -410 5745 5380 3307 19 0 0 chr2 142074986 142075361 -108612493 + L1PA3 LINE L1 5777 6155 0 26 0 0 0 chr2 142075361 142075387 -108612467 + AT_rich Low_complexity Low_complexity 1 26 0 2349 83 13 0 chr2 142075640 142075940 -108611914 + AluY SINE Alu 1 304 -7 201 273 26 39 chr2 142076068 142076145 -108611709 - L2 LINE L2 -6 3307 3232 409 285 15 13 chr2 142076707 142076865 -108610989 + MIR SINE MIR 40 193 -69 239 133 22 0 chr2 142076890 142076935 -108610919 + (TA)n Simple_repeat Simple_repeat 1 46 0 370 235 15 96 chr2 142077277 142077413 -108610441 + MER5B DNA MER1_type 19 143 -35 249 327 126 6 chr2 142078656 142078815 -108609039 + MIR SINE MIR 79 256 -6 736 188 0 7 chr2 142079075 142079219 -108608635 + FLAM_C SINE Alu 1 143 0 1738 188 0 7 chr2 142079401 142079705 -108608149 - AluJb SINE Alu -8 304 3 475 284 55 39 chr2 142079743 142079997 -108607857 - L1MC5 LINE L1 -86 7875 7618 285 75 0 0 chr2 142080238 142080278 -108607576 + (CA)n Simple_repeat Simple_repeat 1 40 0 426 265 79 142 chr2 142080358 142080516 -108607338 - L2 LINE L2 -45 3268 3102 6534 82 14 9 chr2 142080516 142081519 -108606335 + L1PA8 LINE L1 5167 6172 0 426 265 79 142 chr2 142081519 142081817 -108606037 - L2 LINE L2 -211 3102 2841 236 260 68 20 chr2 142081899 142082045 -108605809 + L1M4 LINE L1 5030 5182 -964 706 234 78 10 chr2 142082143 142082335 -108605519 - MIR SINE MIR -34 228 24 443 207 200 21 chr2 142082539 142082679 -108605175 + MER45A DNA AcHobo 14 178 0 2101 151 118 0 chr2 142082976 142083359 -108604495 + MSTC LTR MaLR 1 428 0 213 378 143 0 chr2 142083397 142083627 -108604227 + L2 LINE L2 2596 2858 -456 358 295 335 5 chr2 142084000 142084224 -108603630 - L2 LINE L2 -2 3311 3014 1046 181 112 0 chr2 142084261 142084466 -108603388 + AluJo SINE Alu 62 289 -23 199 322 99 40 chr2 142084503 142084655 -108603199 - L2 LINE L2 -341 2973 2813 276 154 0 0 chr2 142085279 142085331 -108602523 + (CA)n Simple_repeat Simple_repeat 2 53 0 210 313 89 9 chr2 142085500 142085612 -108602242 - MIR SINE MIR -102 160 40 225 0 0 0 chr2 142087251 142087276 -108600578 + (A)n Simple_repeat Simple_repeat 1 25 0 828 176 36 6 chr2 142087591 142087756 -108600098 + AluJo SINE Alu 1 170 -142 2316 101 3 3 chr2 142087893 142088201 -108599653 - AluSg SINE Alu -2 308 1 303 305 38 53 chr2 142088329 142088346 -108599508 + MER5A DNA MER1_type 1 15 -174 370 288 135 18 chr2 142088346 142088509 -108599345 - MER5A DNA MER1_type -1 188 7 232 263 18 0 chr2 142088790 142088847 -108599007 + (CAAA)n Simple_repeat Simple_repeat 3 60 0 255 356 95 54 chr2 142089061 142089378 -108598476 - L2 LINE L2 0 3272 2943 418 203 30 90 chr2 142089467 142089600 -108598254 + L2 LINE L2 3137 3261 -11 237 303 141 0 chr2 142089651 142089750 -108598104 + MIR SINE MIR 78 190 -72 350 134 75 0 chr2 142089753 142089820 -108598034 - L1MA7 LINE L1 -138 6153 6082 806 110 0 0 chr2 142089820 142089941 -108597913 + L1MA7 LINE L1 6165 6291 0 184 307 11 57 chr2 142090199 142090287 -108597567 + MIR SINE MIR 123 206 -56 319 314 35 35 chr2 142090411 142090580 -108597274 + MIR SINE MIR 16 184 -78 30 45 0 0 chr2 142090921 142090965 -108596889 + AT_rich Low_complexity Low_complexity 1 44 0 492 264 71 21 chr2 142091759 142091899 -108595955 - L2 LINE L2 0 3272 3126 298 287 59 59 chr2 142092034 142092170 -108595684 - MER5B DNA MER1_type -1 177 42 464 279 157 7 chr2 142092240 142092380 -108595474 - MIR SINE MIR -79 183 23 239 292 97 26 chr2 142093168 142093281 -108594573 - MER5B DNA MER1_type -1 177 57 507 220 60 71 chr2 142093735 142093903 -108593951 + MER5B DNA MER1_type 11 176 -2 434 254 201 0 chr2 142094202 142094336 -108593518 + MER5A DNA MER1_type 29 189 0 259 388 8 0 chr2 142094446 142094567 -108593287 - L2 LINE L2 -7 3306 3185 483 269 240 6 chr2 142094794 142094998 -108592856 - MIR SINE MIR -7 255 4 486 244 22 30 chr2 142095151 142095286 -108592568 + MER5A DNA MER1_type 53 186 -3 324 318 115 0 chr2 142097788 142097936 -108589918 - MIR3 SINE MIR -7 201 37 2115 132 7 3 chr2 142098251 142098555 -108589299 - AluSc SINE Alu -2 307 3 180 111 0 0 chr2 142098788 142098815 -108589039 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 252 277 30 36 chr2 142099166 142099332 -108588522 + HAL1 LINE L1 1203 1367 -1140 1512 182 0 22 chr2 142099397 142099672 -108588182 + AluJo SINE Alu 25 293 -19 231 188 0 0 chr2 142099673 142099721 -108588133 + GA-rich Low_complexity Low_complexity 2 49 0 1465 208 19 40 chr2 142100064 142100434 -108587420 + MLT1A1 LTR MaLR 4 365 0 557 201 30 8 chr2 142100917 142101051 -108586803 + L1MD2 LINE L1 6209 6345 -14 2961 3 0 0 chr2 142101335 142101653 -108586201 + AluYb8 SINE Alu 1 318 0 2486 69 0 7 chr2 142103053 142103359 -108584495 - AluSq SINE Alu -9 304 1 271 269 109 0 chr2 142105478 142105597 -108582257 - L2 LINE L2 0 3313 3182 201 338 0 15 chr2 142108529 142108597 -108579257 - MIR3 SINE MIR -130 78 12 354 300 96 76 chr2 142110285 142110535 -108577319 - MIR SINE MIR -7 255 1 198 0 0 0 chr2 142110815 142110837 -108577017 + (CA)n Simple_repeat Simple_repeat 2 23 0 374 240 48 16 chr2 142111047 142111172 -108576682 + MER103 DNA DNA 30 158 -8 350 351 53 13 chr2 142112130 142112281 -108575573 + MIR SINE MIR 90 246 -16 2265 194 99 10 chr2 142112973 142113477 -108574377 - L1MB5 LINE L1 -10 6164 5616 25 65 0 0 chr2 142113688 142113734 -108574120 + AT_rich Low_complexity Low_complexity 1 46 0 239 258 0 0 chr2 142113786 142113848 -108574006 + A-rich Low_complexity Low_complexity 1 62 0 296 330 132 41 chr2 142114474 142114671 -108573183 - MIR SINE MIR 0 262 48 896 20 0 0 chr2 142115400 142115528 -108572326 + AluY SINE Alu 184 311 0 192 259 74 62 chr2 142115529 142115610 -108572244 - MIR SINE MIR -8 254 173 475 373 82 0 chr2 142115633 142115853 -108572001 - MIR SINE MIR -21 241 4 1644 142 183 16 chr2 142116098 142116465 -108571389 - MSTA LTR MaLR 0 428 1 192 292 37 62 chr2 142117855 142118016 -108569838 + MIR SINE MIR 42 198 -64 424 309 112 0 chr2 142118423 142118646 -108569208 - L1ME4a LINE L1 -288 5833 5586 3110 211 43 48 chr2 142118698 142118871 -108568983 - L1ME1 LINE L1 -17 6149 5977 2198 63 45 0 chr2 142118871 142119157 -108568697 - AluY SINE Alu 0 311 13 3110 211 43 48 chr2 142119157 142120027 -108567827 - L1ME1 LINE L1 -189 5977 5111 242 318 101 0 chr2 142120337 142120466 -108567388 + L2 LINE L2 3172 3313 0 27 0 0 0 chr2 142121769 142121796 -108566058 + AT_rich Low_complexity Low_complexity 1 27 0 322 289 0 12 chr2 142122366 142122449 -108565405 + L2 LINE L2 3227 3308 -5 458 302 86 30 chr2 142122595 142122827 -108565027 + MIR SINE MIR 17 261 -1 7120 49 3 2 chr2 142124856 142125751 -108562103 + L1PA7 LINE L1 5254 6149 -5 216 255 28 38 chr2 142126642 142126748 -108561106 + (CATAA)n Simple_repeat Simple_repeat 5 109 0 * 401 190 22 50 chr2 142126669 142126848 -108561006 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 28 48 0 0 chr2 142128051 142128093 -108559761 + AT_rich Low_complexity Low_complexity 1 42 0 187 311 193 0 chr2 142128185 142128304 -108559550 + L2 LINE L2 3171 3312 -1 216 320 13 13 chr2 142128509 142128587 -108559267 - MIR SINE MIR -111 151 74 306 0 0 0 chr2 142128822 142128856 -108558998 + (TG)n Simple_repeat Simple_repeat 2 35 0 1860 190 10 58 chr2 142129993 142130403 -108557451 - MLT1B LTR MaLR 0 390 1 2462 179 64 54 chr2 142130979 142131587 -108556267 + LTR8A LTR ERV1 1 614 -113 4658 71 28 0 chr2 142131602 142132220 -108555634 + PABL_A LTR ERV1 26 660 0 455 128 92 119 chr2 142132220 142132329 -108555525 + LTR8A LTR ERV1 622 727 0 192 374 48 0 chr2 142132370 142132453 -108555401 - L2 LINE L2 -215 3057 2971 292 373 25 12 chr2 142132827 142132988 -108554866 + MIR SINE MIR 14 176 -86 420 269 47 18 chr2 142133580 142133751 -108554103 + MER5B DNA MER1_type 3 178 0 218 316 23 0 chr2 142133879 142133993 -108553861 + MIR SINE MIR 74 191 -71 273 261 95 104 chr2 142134771 142134993 -108552861 - L3 LINE CR1 -169 1408 1189 281 186 54 0 chr2 142137209 142137338 -108550516 + (TCTA)n Simple_repeat Simple_repeat 3 138 0 692 252 73 60 chr2 142137516 142137974 -108549880 - MLT1D LTR MaLR 0 467 5 898 240 42 52 chr2 142138041 142138553 -108549301 + L1ME3A LINE L1 5123 5636 -534 399 84 53 74 chr2 142138578 142138673 -108549181 - L1MA7 LINE L1 -1 6290 6198 1224 169 27 71 chr2 142138673 142138969 -108548885 + L1MA8 LINE L1 5558 5840 -451 792 248 109 57 chr2 142138998 142139220 -108548634 + L1ME3A LINE L1 5739 5948 -222 1529 160 10 67 chr2 142139220 142139532 -108548322 + AluJo SINE Alu 2 295 -17 792 248 109 57 chr2 142139532 142139712 -108548142 + L1ME3A LINE L1 5948 6162 -8 325 233 48 0 chr2 142142750 142142853 -108545001 - L1MC4 LINE L1 0 8042 7935 249 299 11 11 chr2 142142932 142143019 -108544835 - L1MC4 LINE L1 -268 7774 7688 735 174 87 117 chr2 142143026 142143290 -108544564 - L1MC4 LINE L1 -420 7622 7367 5215 130 20 33 chr2 142143290 142144236 -108543618 - Tigger4(Zombi) DNA MER2_type 0 2731 1 2659 229 35 12 chr2 142144241 142144928 -108542926 - L1MC4 LINE L1 -680 7362 6660 230 156 0 0 chr2 142144928 142144973 -108542881 + LTR66 LTR ERVL 394 438 -172 303 281 22 0 chr2 142145016 142145105 -108542749 - L1MC3 LINE L1 -21 7764 7674 568 332 57 9 chr2 142145125 142145709 -108542145 + L1ME4a LINE L1 3998 4609 -1537 258 317 110 7 chr2 142146160 142146305 -108541549 - MIR SINE MIR -64 198 39 892 180 34 0 chr2 142146690 142146896 -108540958 + L1MA7 LINE L1 6079 6291 0 192 152 0 0 chr2 142146950 142146983 -108540871 + (CATA)n Simple_repeat Simple_repeat 3 35 0 300 111 0 0 chr2 142147182 142147227 -108540627 + (CA)n Simple_repeat Simple_repeat 2 46 0 460 284 125 23 chr2 142148087 142148394 -108539460 + L1ME4a LINE L1 5575 5916 -205 372 268 61 55 chr2 142148470 142148634 -108539220 - L2 LINE L2 -212 3060 2896 21 36 0 0 chr2 142148849 142148877 -108538977 + AT_rich Low_complexity Low_complexity 1 28 0 328 306 18 9 chr2 142151163 142151274 -108536580 + MER94 DNA DNA 23 134 0 242 229 82 41 chr2 142151586 142151708 -108536146 + MER103 DNA DNA 38 164 -2 243 282 251 25 chr2 142151893 142152056 -108535798 + MIR3 SINE MIR 1 200 -8 329 203 76 25 chr2 142152082 142152161 -108535693 - L2 LINE L2 0 3313 3231 21 36 0 0 chr2 142152322 142152350 -108535504 + AT_rich Low_complexity Low_complexity 1 28 0 238 167 0 0 chr2 142153167 142153209 -108534645 - L1 LINE L1 -1729 4417 4376 * 5513 173 31 1 chr2 142153193 142154941 -108532913 + L1PA16 LINE L1 4366 6164 -2 234 324 18 36 chr2 142155680 142155791 -108532063 + MIR SINE MIR 41 149 -113 895 197 24 133 chr2 142155796 142156126 -108531728 + MLT1A1 LTR MaLR 1 294 -71 501 176 38 75 chr2 142156855 142157014 -108530840 + L1MD3 LINE L1 7831 7983 -12 537 297 46 15 chr2 142157198 142157406 -108530448 - MIR SINE MIR -1 261 49 29 60 0 0 chr2 142158245 142158295 -108529559 + AT_rich Low_complexity Low_complexity 1 50 0 284 328 51 28 chr2 142158338 142158515 -108529339 + MER20B DNA MER1_type 3 183 -600 394 272 171 38 chr2 142158564 142158803 -108529051 - L3 LINE CR1 -70 1507 1237 333 269 70 53 chr2 142159447 142159618 -108528236 + MIR SINE MIR 23 196 -66 407 242 115 13 chr2 142159833 142159990 -108527864 - MLT1L LTR MaLR -2 613 441 268 314 0 20 chr2 142160095 142160197 -108527657 - MLT1L LTR MaLR -372 243 144 285 317 77 10 chr2 142160271 142160375 -108527479 - L2 LINE L2 -221 3051 2941 21 89 0 0 chr2 142160512 142160568 -108527286 + AT_rich Low_complexity Low_complexity 1 56 0 2347 103 0 7 chr2 142162095 142162397 -108525457 - AluSc SINE Alu -7 302 3 1001 177 33 0 chr2 142162519 142162700 -108525154 + MER5A DNA MER1_type 3 189 0 368 302 41 2 chr2 142163214 142163485 -108524369 - LTR16C LTR ERVL 0 491 163 385 340 65 22 chr2 142167080 142167265 -108520589 - MIR SINE MIR -67 195 3 2445 229 102 20 chr2 142167296 142167983 -108519871 - MER21B LTR ERV1 -102 761 19 292 183 0 135 chr2 142168005 142168109 -108519745 - MER21B LTR ERV1 -773 90 1 225 263 18 0 chr2 142168333 142168390 -108519464 + GA-rich Low_complexity Low_complexity 3 60 0 288 313 112 32 chr2 142170113 142170362 -108517492 - MER102a DNA MER1_type -3 327 59 1438 111 14 28 chr2 142172769 142173020 -108514834 + AluSg/x SINE Alu 85 312 0 279 133 0 0 chr2 142174380 142174425 -108513429 + (TG)n Simple_repeat Simple_repeat 2 46 0 6036 41 1 0 chr2 142175146 142175904 -108511950 - L1PA5 LINE L1 0 6154 5396 264 357 8 47 chr2 142176265 142176394 -108511460 + MIR SINE MIR 20 143 -65 1732 180 16 103 chr2 142176437 142176949 -108510905 - MLT1C LTR MaLR 0 467 1 1594 88 0 0 chr2 142177211 142177405 -108510449 + AluSp SINE Alu 84 277 -36 307 190 13 13 chr2 142177435 142177514 -108510340 + GA-rich Low_complexity Low_complexity 3 81 0 553 318 25 8 chr2 142177631 142177956 -108509898 + MLT1K LTR MaLR 37 430 -158 2065 122 0 0 chr2 142179266 142179545 -108508309 + AluSg SINE Alu 1 279 -31 216 0 0 0 chr2 142179548 142179572 -108508282 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1639 158 28 44 chr2 142180700 142180731 -108507123 - AluJo SINE Alu 0 312 282 198 0 0 0 chr2 142180731 142180753 -108507101 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1639 158 28 44 chr2 142180753 142181038 -108506816 - AluJo SINE Alu -30 282 1 775 280 36 28 chr2 142182314 142182564 -108505290 - MIR SINE MIR -6 256 5 295 308 34 68 chr2 142182579 142182612 -108505242 - L2 LINE L2 -6 3307 3274 2583 188 19 4 chr2 142182612 142183074 -108504780 + MER70A LTR ERVL 4 472 0 295 308 34 68 chr2 142183074 142183157 -108504697 - L2 LINE L2 -39 3274 3195 300 346 39 39 chr2 142184077 142184233 -108503621 - MIR3 SINE MIR -16 192 37 23 0 0 0 chr2 142185670 142185693 -108502161 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 142186774 142186795 -108501059 + AT_rich Low_complexity Low_complexity 1 21 0 557 281 78 10 chr2 142187541 142187733 -108500121 - MIR SINE MIR -2 260 56 180 0 0 0 chr2 142188161 142188181 -108499673 + (A)n Simple_repeat Simple_repeat 1 20 0 6235 125 39 58 chr2 142188252 142189495 -108498359 + Tigger3b DNA MER2_type 1 1219 -12 2461 136 3 3 chr2 142189497 142189872 -108497982 - THE1C LTR MaLR 0 375 1 9437 111 38 68 chr2 142189872 142189915 -108497939 - THE1C-int LTR MaLR 0 1580 1537 2357 99 3 3 chr2 142189915 142190228 -108497626 - AluSp SINE Alu 0 313 1 9437 111 38 68 chr2 142190228 142191812 -108496042 - THE1C-int LTR MaLR -43 1537 3 2709 94 11 5 chr2 142191814 142192187 -108495667 - THE1C LTR MaLR 0 375 1 486 280 38 38 chr2 142193341 142193577 -108494277 - MER106A DNA MER1_type 0 236 1 428 332 62 24 chr2 142193603 142193811 -108494043 - MIR SINE MIR -44 218 3 244 321 37 18 chr2 142195164 142195273 -108492581 - MIR3 SINE MIR -16 192 82 326 362 24 0 chr2 142195670 142195797 -108492057 + L2 LINE L2 3143 3272 0 402 281 36 109 chr2 142195933 142196125 -108491729 + MER91A DNA MER1_type 18 195 -1 469 332 60 40 chr2 142197184 142197564 -108490290 + L1M4 LINE L1 3809 4196 -1950 1181 209 119 46 chr2 142197689 142197715 -108490139 + MSTD LTR MaLR 1 24 -372 186 71 0 0 chr2 142197715 142197743 -108490111 + (CAA)n Simple_repeat Simple_repeat 1 28 0 1181 209 119 46 chr2 142197743 142198085 -108489769 + MSTD LTR MaLR 24 396 0 275 125 54 18 chr2 142198393 142198449 -108489405 - MER97b DNA MER1_type? -874 179 122 294 73 0 0 chr2 142198479 142198520 -108489334 + (CA)n Simple_repeat Simple_repeat 2 42 0 1097 202 45 12 chr2 142198528 142198665 -108489189 - L1MD2 LINE L1 -70 6289 6139 327 25 0 0 chr2 142198665 142198705 -108489149 + (TG)n Simple_repeat Simple_repeat 1 40 0 1097 202 45 12 chr2 142198705 142198814 -108489040 - L1MD2 LINE L1 -220 6139 6035 1033 281 77 39 chr2 142198949 142199516 -108488338 + L2 LINE L2 2731 3313 0 274 308 100 21 chr2 142199570 142199810 -108488044 + L1ME LINE L1 5457 5715 -406 729 242 83 46 chr2 142201654 142201980 -108485874 + L1ME2 LINE L1 5346 5683 -481 1447 176 47 27 chr2 142202026 142202282 -108485572 + AluJb SINE Alu 33 293 -19 704 203 128 78 chr2 142202282 142202453 -108485401 + L1ME2 LINE L1 5696 5857 -307 1689 182 29 26 chr2 142202453 142202799 -108485055 - MER7A DNA MER2_type -1 345 1 704 203 128 78 chr2 142202799 142202972 -108484882 + L1ME2 LINE L1 5857 6057 -107 2057 168 65 7 chr2 142203455 142203884 -108483970 + MER101 LTR ERV1 9 462 -12 2679 89 18 5 chr2 142203884 142204266 -108483588 - L1PA7 LINE L1 -6 6148 5762 582 381 8 8 chr2 142205046 142205298 -108482556 - MIR SINE MIR -2 260 9 434 260 54 94 chr2 142205957 142206180 -108481674 + MIR SINE MIR 46 259 -3 1202 181 6 78 chr2 142206227 142206575 -108481279 + MER33 DNA MER1_type 2 324 0 451 264 157 25 chr2 142206575 142206734 -108481120 + MER5A DNA MER1_type 9 188 -1 429 349 155 16 chr2 142207165 142207540 -108480314 + L3 LINE CR1 1149 1575 -2 10136 31 0 0 chr2 142207831 142209805 -108478049 + L1PA3 LINE L1 4177 6150 -5 1777 166 10 14 chr2 142210447 142210742 -108477112 + AluJo SINE Alu 1 294 -18 203 339 33 41 chr2 142211524 142211645 -108476209 + MIR3 SINE MIR 59 178 -30 289 296 96 32 chr2 142211676 142211801 -108476053 + MER5B DNA MER1_type 46 178 0 200 86 29 0 chr2 142212237 142212272 -108475582 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 1955 134 0 4 chr2 142212272 142212541 -108475313 - AluSx SINE Alu -32 280 13 12986 130 8 19 chr2 142212948 142215010 -108472844 + Tigger1 DNA MER2_type 24 2061 -357 187 330 52 10 chr2 142215026 142215123 -108472731 - L2 LINE L2 -911 2403 2303 1219 166 16 12 chr2 142215220 142215467 -108472387 + L1MA8 LINE L1 6044 6291 0 252 250 0 56 chr2 142216205 142216277 -108471577 - L2 LINE L2 0 3272 3205 235 318 16 23 chr2 142216321 142216450 -108471404 + GA-rich Low_complexity Low_complexity 1 128 0 243 390 81 48 chr2 142217140 142217412 -108470442 - L2 LINE L2 -25 3247 2967 305 218 8 38 chr2 142219654 142219787 -108468067 + CT-rich Low_complexity Low_complexity 3 131 0 2126 144 33 25 chr2 142221081 142221442 -108466412 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr2 142222363 142222387 -108465467 + AT_rich Low_complexity Low_complexity 1 24 0 2198 98 16 3 chr2 142226451 142226757 -108461097 + AluSp SINE Alu 1 310 -3 240 328 188 0 chr2 142227163 142227291 -108460563 + MIR SINE MIR 3 154 -108 201 74 0 0 chr2 142227393 142227420 -108460434 + (CA)n Simple_repeat Simple_repeat 2 28 0 647 271 95 5 chr2 142228529 142228739 -108459115 - MIR SINE MIR -3 259 31 1984 139 29 23 chr2 142229093 142229438 -108458416 - MER7A DNA MER2_type -1 345 1 1162 307 91 35 chr2 142229888 142230339 -108457515 - L2 LINE L2 0 3313 2889 3450 126 21 13 chr2 142230339 142230862 -108456992 + MER1A DNA MER1_type 1 527 0 1162 307 91 35 chr2 142230862 142231207 -108456647 - L2 LINE L2 -424 2889 2441 30480 103 14 25 chr2 142232639 142238718 -108449136 - L1PA7 LINE L1 0 6469 371 204 259 86 0 chr2 142238765 142238823 -108449031 - L2 LINE L2 -1 3312 3250 1868 151 3 19 chr2 142238842 142239154 -108448700 + AluSx SINE Alu 1 307 -5 271 270 0 0 chr2 142239519 142239582 -108448272 - L2 LINE L2 0 3313 3251 573 90 0 0 chr2 142239708 142239786 -108448068 + MADE1 DNA Mariner 3 80 0 586 269 69 93 chr2 142241515 142241891 -108445963 + L2 LINE L2 2946 3312 -1 360 0 0 0 chr2 142242373 142242413 -108445441 + (TG)n Simple_repeat Simple_repeat 2 41 0 28 29 0 0 chr2 142242774 142242809 -108445045 + AT_rich Low_complexity Low_complexity 1 35 0 350 380 46 5 chr2 142243266 142243461 -108444393 - MIR SINE MIR -15 247 45 1574 171 13 40 chr2 142244176 142244474 -108443380 + AluJo SINE Alu 1 290 -22 438 269 64 21 chr2 142244591 142244732 -108443122 + MIR SINE MIR 48 194 -68 329 289 24 10 chr2 142244741 142244756 -108443098 - MIR SINE MIR 0 262 249 196 255 0 85 chr2 142244756 142244803 -108443051 - L2 LINE L2 -21 3251 3209 329 289 24 10 chr2 142244803 142244930 -108442924 - MIR SINE MIR -13 249 2 1903 131 57 11 chr2 142245612 142245894 -108441960 - AluSx SINE Alu -17 295 1 412 255 102 32 chr2 142245940 142246097 -108441757 - MIR SINE MIR -17 245 78 1090 44 0 0 chr2 142246284 142246419 -108441435 + L1PA4 LINE L1 6018 6152 -3 647 218 73 53 chr2 142246658 142246864 -108440990 - MER63A DNA MER1_type 0 210 1 1944 141 20 10 chr2 142247248 142247545 -108440309 + AluSx SINE Alu 4 303 -9 1557 185 4 4 chr2 142247732 142248026 -108439828 - AluJb SINE Alu 0 320 27 24 53 0 0 chr2 142248049 142248087 -108439767 + AT_rich Low_complexity Low_complexity 1 38 0 1751 173 74 6 chr2 142248334 142248633 -108439221 + MLT1B LTR MaLR 1 278 -112 195 42 0 0 chr2 142248633 142248657 -108439197 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 288 0 0 0 chr2 142248659 142248691 -108439163 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 1751 173 74 6 chr2 142248691 142248753 -108439101 + MLT1B LTR MaLR 278 390 0 31 0 0 0 chr2 142250056 142250087 -108437767 + AT_rich Low_complexity Low_complexity 1 31 0 2403 113 5 13 chr2 142250087 142250146 -108437708 - L1PB1 LINE L1 0 6151 6093 1780 133 11 4 chr2 142250146 142250424 -108437430 - AluSx SINE Alu 0 312 33 2403 113 5 13 chr2 142250424 142250743 -108437111 - L1PB1 LINE L1 -58 6093 5776 270 176 0 0 chr2 142250743 142250794 -108437060 + (TA)n Simple_repeat Simple_repeat 1 51 0 305 337 0 0 chr2 142250799 142250891 -108436963 + L1MC4 LINE L1 6612 6703 -1339 264 59 0 0 chr2 142250901 142250935 -108436919 + (CA)n Simple_repeat Simple_repeat 2 35 0 5113 178 43 14 chr2 142250935 142251920 -108435934 - L1P5 LINE L1 -369 5782 4827 2117 134 3 3 chr2 142251920 142252225 -108435629 - AluSx SINE Alu -7 305 1 5113 178 43 14 chr2 142252225 142252596 -108435258 - L1P5 LINE L1 -1324 4827 4468 204 40 0 0 chr2 142252596 142252621 -108435233 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5113 178 43 14 chr2 142252621 142252910 -108434944 - L1P5 LINE L1 -1683 4468 4094 28 29 0 0 chr2 142252987 142253022 -108434832 + AT_rich Low_complexity Low_complexity 1 35 0 444 306 34 21 chr2 142253053 142253311 -108434543 - L1MB5 LINE L1 -295 5879 5617 1072 210 52 0 chr2 142253511 142253744 -108434110 + MLT1D LTR MaLR 1 245 -260 1932 124 38 0 chr2 142253851 142254118 -108433736 - AluSx SINE Alu -35 277 1 473 290 132 18 chr2 142254227 142254499 -108433355 - L1MB5 LINE L1 -875 5271 4969 653 307 97 36 chr2 142254506 142255197 -108432657 - HAL1 LINE L1 -1252 1255 523 484 308 115 55 chr2 142255307 142255690 -108432164 - MLT1J2 LTR MaLR 0 450 45 444 280 53 61 chr2 142255733 142255997 -108431857 - HAL1 LINE L1 -2245 262 1 296 365 12 54 chr2 142257461 142257628 -108430226 - MIR3 SINE MIR -20 188 29 241 300 100 36 chr2 142258782 142259172 -108428682 + HAL1b LINE L1 56 470 -878 1713 174 0 43 chr2 142259669 142259968 -108427886 + AluSx SINE Alu 1 286 -26 257 200 33 0 chr2 142259968 142260028 -108427826 + (CATATA)n Simple_repeat Simple_repeat 5 66 0 2004 127 0 7 chr2 142260046 142260355 -108427499 + AluSx SINE Alu 6 312 0 345 295 74 42 chr2 142260591 142261019 -108426835 + L1P LINE L1 2266 2679 -3467 570 229 59 0 chr2 142261019 142261137 -108426717 - FLAM_A SINE Alu -7 126 2 345 295 74 42 chr2 142261137 142261644 -108426210 + L1P LINE L1 2679 3221 -2925 229 215 76 13 chr2 142261787 142261866 -108425988 + L1MC4a LINE L1 5403 5486 -2322 * 5287 40 0 0 chr2 142261863 142262520 -108425334 + L1P LINE L1 4660 5316 -830 3636 147 17 65 chr2 142262637 142262915 -108424939 + L1PA16 LINE L1 5054 5344 -822 1773 150 30 0 chr2 142262915 142263181 -108424673 + AluSp SINE Alu 3 276 -37 3636 147 17 65 chr2 142263181 142263752 -108424102 + L1PA16 LINE L1 5344 5888 -278 7114 37 2 1 chr2 142263856 142264727 -108423127 + L1PA4 LINE L1 5278 6149 -6 43740 39 5 9 chr2 142264819 142270994 -108416860 + L1PA4 LINE L1 2 6152 -3 28 0 0 0 chr2 142270994 142271022 -108416832 + AT_rich Low_complexity Low_complexity 1 28 0 1168 285 84 5 chr2 142271022 142271464 -108416390 + L1MC4a LINE L1 5569 6045 -1763 229 224 13 13 chr2 142271486 142271562 -108416292 + L1MC4a LINE L1 6116 6191 -1617 185 189 42 0 chr2 142271627 142271722 -108416132 + (TA)n Simple_repeat Simple_repeat 2 100 0 3800 217 78 68 chr2 142273309 142275065 -108412789 + L1MC2 LINE L1 1 1910 -4654 2167 128 0 7 chr2 142275065 142275369 -108412485 + AluSx SINE Alu 1 302 -10 3800 217 78 68 chr2 142275369 142275941 -108411913 + L1MC2 LINE L1 1910 2475 -4089 6333 153 29 9 chr2 142275957 142278171 -108409683 + L1MA3 LINE L1 4047 6305 0 27 0 0 0 chr2 142278171 142278198 -108409656 + AT_rich Low_complexity Low_complexity 1 27 0 8684 228 47 19 chr2 142278198 142282222 -108405632 + L1MC2 LINE L1 2481 6619 -143 1128 221 63 42 chr2 142282231 142282562 -108405292 + MLT1A1 LTR MaLR 10 347 -18 1280 219 50 38 chr2 142282565 142282908 -108404946 - MLT1A1 LTR MaLR -1 364 18 555 189 45 15 chr2 142282970 142283102 -108404752 + L1MC2 LINE L1 6616 6751 -11 212 159 0 45 chr2 142283865 142283909 -108403945 + A-rich Low_complexity Low_complexity 6 47 0 328 259 18 54 chr2 142285328 142285440 -108402414 + MIR SINE MIR 84 191 -71 4974 59 0 12 chr2 142286148 142286791 -108401063 + L1PA8 LINE L1 5535 6169 -3 21 0 0 0 chr2 142287970 142287991 -108399863 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr2 142289120 142289163 -108398691 + AT_rich Low_complexity Low_complexity 1 43 0 245 218 51 39 chr2 142289405 142289483 -108398371 + L3 LINE CR1 1494 1572 -5 256 341 11 11 chr2 142290219 142290307 -108397547 - L2 LINE L2 0 3272 3185 23 33 0 0 chr2 142290788 142290818 -108397036 + AT_rich Low_complexity Low_complexity 1 30 0 302 276 146 8 chr2 142291426 142291549 -108396305 - MIR3 SINE MIR -11 197 58 2032 172 72 81 chr2 142293315 142293406 -108394448 + LTR38B LTR ERV1 1 91 -519 1883 58 0 4 chr2 142293406 142293648 -108394206 + L1PA7 LINE L1 5912 6152 -2 2032 172 72 81 chr2 142293648 142294150 -108393704 + LTR38B LTR ERV1 91 589 -21 412 314 29 116 chr2 142294300 142294805 -108393049 + L2 LINE L2 2519 2928 -344 2345 104 0 0 chr2 142294805 142295113 -108392741 - AluSq SINE Alu -5 308 1 412 314 29 116 chr2 142295113 142295416 -108392438 + L2 LINE L2 2928 3256 -16 4266 172 36 11 chr2 142295954 142296704 -108391150 + Tigger7 DNA MER2_type 1 769 -1718 1822 151 37 66 chr2 142296704 142297082 -108390772 + Tigger7 DNA MER2_type 2217 2583 -4 340 210 90 20 chr2 142298989 142299089 -108388765 + MER103 DNA DNA 11 117 -49 250 134 12 73 chr2 142299868 142299950 -108387904 + (TTATA)n Simple_repeat Simple_repeat 4 80 0 222 259 44 15 chr2 142299992 142300127 -108387727 + (TA)n Simple_repeat Simple_repeat 2 140 0 2187 129 0 3 chr2 142300869 142301178 -108386676 + AluSg SINE Alu 2 309 -1 233 350 29 19 chr2 142301793 142301896 -108385958 + MIR SINE MIR 31 134 -128 1096 200 24 9 chr2 142302013 142302223 -108385631 - MER20 DNA MER1_type -5 214 2 211 256 0 0 chr2 142304121 142304164 -108383690 + (TA)n Simple_repeat Simple_repeat 2 44 0 309 248 10 69 chr2 142306485 142306528 -108381326 + AluSg/x SINE Alu 89 133 -169 4553 66 2 14 chr2 142306528 142307148 -108380706 + L1PA8 LINE L1 5561 6172 0 309 248 10 69 chr2 142307148 142307205 -108380649 + AluSg/x SINE Alu 133 183 -119 458 112 129 0 chr2 142307540 142307656 -108380198 + AluSc SINE Alu 6 136 -173 502 85 16 2 chr2 142307658 142307721 -108380133 - L1P LINE L1 -1172 4974 4909 3066 65 0 19 chr2 142307721 142308129 -108379725 + L1PA6 LINE L1 5749 6152 -2 1278 107 0 6 chr2 142308137 142308315 -108379539 + AluSc SINE Alu 127 303 -6 1392 248 112 32 chr2 142308353 142308825 -108379029 + MLT1H LTR MaLR 37 546 -3 198 381 29 19 chr2 142309503 142309608 -108378246 - L2 LINE L2 -31 3241 3136 275 321 31 63 chr2 142309679 142309779 -108378075 + MER117 DNA MER1_type 18 113 -84 1705 179 6 41 chr2 142309779 142310098 -108377756 + AluJb SINE Alu 1 308 -4 275 321 31 63 chr2 142310098 142310156 -108377698 + MER117 DNA MER1_type 113 171 -26 377 293 9 0 chr2 142310322 142310428 -108377426 - L2 LINE L2 -17 3296 3190 189 147 0 0 chr2 142310539 142310573 -108377281 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2134 113 0 3 chr2 142310575 142310858 -108376996 - AluSx SINE Alu -30 282 1 2162 100 27 15 chr2 142310988 142311317 -108376537 - L1PB3 LINE L1 0 6154 5822 311 273 0 27 chr2 142312110 142312220 -108375634 - MER103 DNA DNA -1 165 59 334 248 95 77 chr2 142312450 142312561 -108375293 + L1ME4a LINE L1 5722 5830 -291 2089 118 0 0 chr2 142312561 142312841 -108375013 + AluSx SINE Alu 21 300 -12 334 248 95 77 chr2 142312841 142312951 -108374903 + L1ME4a LINE L1 5830 5947 -174 451 393 27 20 chr2 142313098 142313391 -108374463 + L2 LINE L2 2977 3271 -1 544 286 122 11 chr2 142313909 142314098 -108373756 - MIR SINE MIR -5 257 48 481 261 7 35 chr2 142314121 142314263 -108373591 - L2 LINE L2 -2 3311 3174 559 296 87 39 chr2 142314373 142314728 -108373126 + MLT1J2 LTR MaLR 65 436 -14 287 278 21 26 chr2 142316125 142316261 -108371593 + MLT1J1 LTR MaLR 74 242 -269 248 289 26 0 chr2 142316266 142316342 -108371512 + MLT1J2 LTR MaLR 248 325 -125 704 364 87 33 chr2 142316485 142317210 -108370644 - L2 LINE L2 -185 3128 2359 670 283 151 24 chr2 142318417 142318873 -108368981 + LTR33A LTR ERVL 8 521 -2 1016 180 69 37 chr2 142318927 142319144 -108368710 + MER58A DNA MER1_type 1 224 0 990 198 91 38 chr2 142319209 142319528 -108368326 - Charlie5 DNA MER1_type 0 2624 2289 1796 196 28 5 chr2 142319535 142319932 -108367922 + L1MD1 LINE L1 5456 5861 -498 1346 195 63 6 chr2 142320015 142320348 -108367506 + L1MD1 LINE L1 5842 6193 -49 284 194 39 48 chr2 142320349 142320452 -108367402 - Charlie5 DNA MER1_type -277 2335 2234 * 345 161 0 161 chr2 142320449 142320497 -108367357 - Charlie5 DNA MER1_type -2497 127 111 645 153 0 0 chr2 142320497 142320608 -108367246 + L1PB4 LINE L1 6044 6154 -2 345 161 0 161 chr2 142320608 142320689 -108367165 - Charlie5 DNA MER1_type -2513 111 19 262 255 108 24 chr2 142321538 142321712 -108366142 + L2 LINE L2 2771 2965 -307 465 309 63 22 chr2 142321870 142322093 -108365761 - MIR SINE MIR -30 232 1 284 309 0 0 chr2 142322108 142322189 -108365665 - L2 LINE L2 -2 3270 3190 2504 234 82 25 chr2 142323333 142324232 -108363622 + Charlie1 DNA MER1_type 128 1078 -1683 348 200 80 20 chr2 142324730 142324830 -108363024 + MER46C DNA MER2_type 2 107 -231 655 268 125 9 chr2 142325652 142325876 -108361978 + MIR SINE MIR 6 255 -7 497 318 27 77 chr2 142326714 142327158 -108360696 - L2 LINE L2 -33 3239 2818 181 388 78 0 chr2 142327656 142327759 -108360095 + MIR SINE MIR 36 146 -116 1398 214 47 19 chr2 142328393 142328758 -108359096 - L1MEc LINE L1 -5987 409 35 222 304 88 40 chr2 142329893 142330018 -108357836 - L2 LINE L2 -8 3305 3175 1017 210 19 0 chr2 142330321 142330535 -108357319 + MER20 DNA MER1_type 1 218 -1 493 209 127 117 chr2 142330952 142331235 -108356619 + L2 LINE L2 3028 3313 0 192 331 41 41 chr2 142331294 142331415 -108356439 - L2 LINE L2 -50 3222 3102 790 219 10 41 chr2 142332045 142332092 -108355762 + MER20 DNA MER1_type 30 77 -142 2087 133 39 33 chr2 142332092 142332452 -108355402 + THE1B LTR MaLR 1 362 -2 790 219 10 41 chr2 142332452 142332600 -108355254 + MER20 DNA MER1_type 77 219 0 423 0 0 0 chr2 142335470 142335517 -108352337 + (TATG)n Simple_repeat Simple_repeat 2 48 0 2331 59 0 7 chr2 142335517 142335805 -108352049 - AluY SINE Alu -25 286 1 24 0 0 0 chr2 142336089 142336113 -108351741 + AT_rich Low_complexity Low_complexity 1 24 0 480 35 0 0 chr2 142337569 142337627 -108350227 + (TG)n Simple_repeat Simple_repeat 1 58 0 321 265 76 70 chr2 142338034 142338219 -108349635 + MIR SINE MIR 51 236 -26 21 36 0 0 chr2 142339009 142339037 -108348817 + AT_rich Low_complexity Low_complexity 1 28 0 411 303 67 22 chr2 142339468 142339646 -108348208 + MIR3 SINE MIR 17 202 -6 24 0 0 0 chr2 142341078 142341102 -108346752 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 142341350 142341375 -108346479 + AT_rich Low_complexity Low_complexity 1 25 0 453 19 0 0 chr2 142342957 142343011 -108344843 + (TG)n Simple_repeat Simple_repeat 2 55 0 270 81 0 0 chr2 142343618 142343655 -108344199 + (T)n Simple_repeat Simple_repeat 1 37 0 192 232 145 0 chr2 142344075 142344144 -108343710 + MIR3 SINE MIR 112 190 -18 207 229 66 0 chr2 142344655 142344716 -108343138 + GA-rich Low_complexity Low_complexity 2 66 0 27 0 0 0 chr2 142345192 142345219 -108342635 + AT_rich Low_complexity Low_complexity 1 27 0 1658 194 16 29 chr2 142345271 142345585 -108342269 + AluJo SINE Alu 1 310 -2 224 200 0 0 chr2 142345585 142345625 -108342229 + GA-rich Low_complexity Low_complexity 1 40 0 207 345 63 97 chr2 142347190 142347396 -108340458 + MIR SINE MIR 48 246 -16 2267 66 7 3 chr2 142347410 142347696 -108340158 - AluY SINE Alu -24 287 1 211 259 17 0 chr2 142348020 142348078 -108339776 + (TA)n Simple_repeat Simple_repeat 2 60 0 201 94 0 0 chr2 142348263 142348295 -108339559 + (TTG)n Simple_repeat Simple_repeat 2 33 0 655 319 81 12 chr2 142349248 142349568 -108338286 + LTR16C LTR ERVL 150 491 0 21 0 0 0 chr2 142350600 142350621 -108337233 + AT_rich Low_complexity Low_complexity 1 21 0 241 379 48 0 chr2 142350708 142350811 -108337043 + L2 LINE L2 3129 3236 -36 387 345 7 14 chr2 142351772 142351914 -108335940 + MIR3 SINE MIR 44 184 -24 548 302 154 61 chr2 142352071 142352341 -108335513 + L2 LINE L2 2577 2820 -493 2312 161 29 21 chr2 142352341 142352762 -108335092 - MSTB LTR MaLR 0 426 3 548 302 154 61 chr2 142352762 142353158 -108334696 + L2 LINE L2 2820 3313 0 580 235 95 27 chr2 142353771 142353992 -108333862 + L1MB8 LINE L1 5942 6177 -1 1368 160 48 12 chr2 142355380 142355711 -108332143 - MSTB LTR MaLR 0 426 1 8164 180 26 11 chr2 142355711 142357292 -108330562 - MSTB-int LTR MaLR 0 1651 48 2202 191 19 7 chr2 142357321 142357740 -108330114 - MSTB LTR MaLR -2 424 1 606 49 0 0 chr2 142358594 142358676 -108329178 + (TG)n Simple_repeat Simple_repeat 2 83 0 653 141 7 99 chr2 142359543 142359685 -108328169 + FLAM_C SINE Alu 5 133 0 606 196 0 0 chr2 142359810 142359912 -108327942 + AluS SINE Alu 1 102 -211 206 444 43 0 chr2 142359929 142360046 -108327808 + L2 LINE L2 3107 3228 -44 196 344 35 66 chr2 142360075 142360331 -108327523 - L2 LINE L2 -27 3245 2998 18775 166 31 19 chr2 142360945 142363912 -108323942 + L1PA10 LINE L1 10 2938 -3545 2206 117 16 0 chr2 142363912 142364219 -108323635 + AluSx SINE Alu 1 312 0 18775 166 31 19 chr2 142364219 142365084 -108322770 + L1PA10 LINE L1 2938 3791 -2692 2408 58 41 0 chr2 142365084 142365378 -108322476 + AluY SINE Alu 1 306 -5 18775 166 31 19 chr2 142365378 142367803 -108320051 + L1PA10 LINE L1 3791 6475 -8 451 255 11 90 chr2 142369073 142369261 -108318593 - MER5B DNA MER1_type -3 175 3 437 241 115 59 chr2 142369510 142369796 -108318058 - HAL1 LINE L1 -4 2503 2202 445 281 91 24 chr2 142369856 142370066 -108317788 + MLT1L LTR MaLR 158 381 -234 215 125 25 0 chr2 142370291 142370331 -108317523 + (TA)n Simple_repeat Simple_repeat 2 42 0 288 0 0 0 chr2 142370332 142370364 -108317490 + (TG)n Simple_repeat Simple_repeat 2 33 0 328 311 104 12 chr2 142370374 142370538 -108317316 - HAL1 LINE L1 -340 2167 1989 265 373 8 8 chr2 142370800 142370934 -108316920 - HAL1 LINE L1 -640 1867 1734 1269 281 95 60 chr2 142371086 142371514 -108316340 - HAL1 LINE L1 -947 1560 1149 1821 162 10 7 chr2 142371514 142371822 -108316032 - AluSx SINE Alu -3 309 1 1269 281 95 60 chr2 142371822 142372389 -108315465 - HAL1 LINE L1 -1358 1149 530 25 51 0 0 chr2 142373037 142373076 -108314778 + AT_rich Low_complexity Low_complexity 1 39 0 1338 259 74 35 chr2 142373251 142374161 -108313693 + L1ME3A LINE L1 4992 5937 -233 192 396 67 26 chr2 142374487 142374757 -108313097 - L2 LINE L2 -688 2626 2346 215 298 50 41 chr2 142374861 142374982 -108312872 - L2 LINE L2 -12 3301 3180 1731 198 3 0 chr2 142375487 142375780 -108312074 + AluJb SINE Alu 1 294 -18 632 281 200 3 chr2 142376480 142376765 -108311089 + L2 LINE L2 2929 3269 -44 631 304 93 46 chr2 142376769 142376974 -108310880 - L2 LINE L2 -1305 2009 1815 2231 104 0 33 chr2 142376974 142377281 -108310573 - AluSg SINE Alu -13 297 1 631 304 93 46 chr2 142377281 142377536 -108310318 - L2 LINE L2 -1499 1815 1527 907 169 0 0 chr2 142377556 142377698 -108310156 - FRAM SINE Alu -9 167 26 506 315 98 30 chr2 142377778 142378013 -108309841 - L2 LINE L2 -1942 1372 1122 1238 211 7 19 chr2 142378337 142378607 -108309247 - AluJo SINE Alu -15 297 31 225 0 0 0 chr2 142379569 142379594 -108308260 + (A)n Simple_repeat Simple_repeat 1 25 0 1719 221 52 40 chr2 142379614 142380112 -108307742 - MLT1D LTR MaLR 0 505 2 265 247 0 14 chr2 142380561 142380634 -108307220 - AluS SINE Alu -230 72 1 1835 166 0 46 chr2 142381003 142381329 -108306525 + AluJb SINE Alu 1 311 -1 591 288 143 67 chr2 142382686 142383162 -108304692 - L3 LINE CR1 -214 1363 852 192 359 26 26 chr2 142383452 142383569 -108304285 - L3 LINE CR1 -764 813 697 580 283 198 17 chr2 142383993 142384347 -108303507 - MLT1K LTR MaLR -61 527 110 2233 128 0 0 chr2 142384464 142384770 -108303084 + AluSg SINE Alu 1 306 -4 576 170 43 0 chr2 142384825 142384919 -108302935 - AluJb SINE Alu -15 297 200 37 0 0 0 chr2 142384924 142384961 -108302893 + AT_rich Low_complexity Low_complexity 1 37 0 693 50 30 0 chr2 142385386 142385485 -108302369 - AluY SINE Alu -1 310 209 1449 76 5 35 chr2 142385485 142385683 -108302171 + AluY SINE Alu 3 194 -117 21 36 0 0 chr2 142386559 142386587 -108301267 + AT_rich Low_complexity Low_complexity 1 28 0 2352 66 10 3 chr2 142386702 142387005 -108300849 - AluY SINE Alu -6 305 1 276 291 55 27 chr2 142387097 142387207 -108300647 + L2 LINE L2 2959 3071 -201 2230 113 3 0 chr2 142389273 142389573 -108298281 + AluSg SINE Alu 1 301 -9 23 0 0 0 chr2 142389575 142389598 -108298256 + AT_rich Low_complexity Low_complexity 1 23 0 879 42 0 25 chr2 142390993 142391111 -108296743 - L1PA8 LINE L1 -2 6170 6056 2235 108 16 0 chr2 142391158 142391463 -108296391 - AluSg SINE Alu 0 310 1 1633 63 0 0 chr2 142391463 142391668 -108296186 - L1P3 LINE L1 -390 5782 5578 515 230 30 7 chr2 142391670 142391805 -108296049 + MER5B DNA MER1_type 41 178 0 549 280 130 56 chr2 142391932 142392310 -108295544 - MLT1I LTR MaLR -3 406 1 377 250 9 19 chr2 142392649 142392757 -108295097 + MIR SINE MIR 156 262 0 300 235 12 12 chr2 142392771 142392852 -108295002 + (CATATA)n Simple_repeat Simple_repeat 2 82 0 207 100 0 0 chr2 142392944 142392974 -108294880 + (TG)n Simple_repeat Simple_repeat 2 31 0 188 335 27 21 chr2 142393419 142393607 -108294247 - L2 LINE L2 -439 2875 2687 23 54 0 0 chr2 142394458 142394495 -108293359 + AT_rich Low_complexity Low_complexity 1 37 0 10476 151 16 19 chr2 142394694 142396497 -108291357 + L1P LINE L1 11 1806 -4340 368 194 0 0 chr2 142396495 142396567 -108291287 + L1PA6 LINE L1 1311 1382 -4764 * 26922 63 8 9 chr2 142396569 142400945 -108286909 + L1PA6 LINE L1 1793 6154 0 377 271 34 0 chr2 142400947 142401065 -108286789 + L1M4 LINE L1 3965 4086 -2060 230 0 33 0 chr2 142401068 142401098 -108286756 + (TA)n Simple_repeat Simple_repeat 2 32 0 1297 167 0 0 chr2 142401118 142401316 -108286538 + AluJb SINE Alu 1 198 -114 2037 143 37 9 chr2 142401383 142401733 -108286121 + L1PB4 LINE L1 5741 6100 -56 582 237 51 6 chr2 142404651 142404839 -108283015 + L1MB8 LINE L1 5960 6161 -23 5237 96 1 0 chr2 142404987 142405715 -108282139 - L1PB1 LINE L1 -5 6146 5418 250 143 0 0 chr2 142405715 142405764 -108282090 + L1MB7 LINE L1 6127 6175 -9 317 200 62 0 chr2 142405785 142405945 -108281909 + (TA)n Simple_repeat Simple_repeat 1 170 0 395 316 94 6 chr2 142406397 142406568 -108281286 - MIR SINE MIR -48 214 29 2140 122 0 13 chr2 142408210 142408522 -108279332 - AluSx SINE Alu -4 308 1 261 0 0 0 chr2 142408645 142408674 -108279180 + (GGAA)n Simple_repeat Simple_repeat 4 32 0 2402 122 35 37 chr2 142408965 142409400 -108278454 + Tigger2a DNA MER2_type 1 434 0 269 361 37 20 chr2 142410349 142410511 -108277343 + MIR3 SINE MIR 14 175 -66 256 283 0 0 chr2 142410515 142410575 -108277279 + (CATATA)n Simple_repeat Simple_repeat 6 65 0 26 50 0 0 chr2 142410924 142410964 -108276890 + AT_rich Low_complexity Low_complexity 1 40 0 2281 140 25 0 chr2 142413377 142413734 -108274120 + MER47A DNA MER2_type 1 366 0 1839 189 3 3 chr2 142415063 142415375 -108272479 - AluJb SINE Alu 0 312 1 487 76 0 13 chr2 142415377 142415456 -108272398 - L1PA13 LINE L1 -3 6160 6083 5573 222 30 11 chr2 142415933 142417411 -108270443 + L1MB2 LINE L1 3467 4972 -1174 1369 142 129 0 chr2 142417452 142417685 -108270169 + AluSx SINE Alu 48 310 -2 3827 208 25 10 chr2 142417685 142418834 -108269020 + L1MB2 LINE L1 5007 6170 -1 561 184 10 0 chr2 142420360 142420458 -108267396 + FLAM_A SINE Alu 4 102 -40 6694 201 60 36 chr2 142420576 142422186 -108265668 + MER52A LTR ERV1 1 1755 0 214 343 161 15 chr2 142423533 142423670 -108264184 + MIR3 SINE MIR 36 192 -16 244 358 130 24 chr2 142425200 142425407 -108262447 + MIR SINE MIR 22 250 -12 218 31 0 31 chr2 142425643 142425675 -108262179 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 628 283 49 49 chr2 142426005 142426252 -108261602 + MIR SINE MIR 15 261 -1 2639 90 3 3 chr2 142426963 142427318 -108260536 - THE1A LTR MaLR 0 355 1 7282 114 7 1 chr2 142427318 142428383 -108259471 - THE1A-int LTR MaLR 0 1580 510 5625 108 9 9 chr2 142428489 142429357 -108258497 - THE1A-int LTR MaLR -712 868 1 2726 85 3 0 chr2 142429357 142429711 -108258143 - THE1A LTR MaLR 0 355 1 278 282 0 0 chr2 142429716 142429794 -108258060 - MIR SINE MIR -105 157 80 2210 99 13 29 chr2 142429903 142430217 -108257637 - AluSx SINE Alu -3 309 1 237 159 0 0 chr2 142430299 142430343 -108257511 + (TCCA)n Simple_repeat Simple_repeat 2 45 0 36 91 0 0 chr2 142431388 142431487 -108256367 + AT_rich Low_complexity Low_complexity 1 99 0 193 337 0 58 chr2 142431505 142431591 -108256263 - MIR SINE MIR -169 93 13 2042 138 0 7 chr2 142433061 142433351 -108254503 - AluSx SINE Alu -22 290 3 284 194 92 51 chr2 142433846 142433944 -108253910 + MIR SINE MIR 115 216 -46 2190 133 7 0 chr2 142435009 142435317 -108252537 + AluSx SINE Alu 3 312 0 211 250 31 0 chr2 142435882 142435946 -108251908 + (CATATA)n Simple_repeat Simple_repeat 2 67 0 220 369 108 23 chr2 142436876 142437006 -108250848 + L2 LINE L2 3118 3258 -14 438 36 0 0 chr2 142438275 142438331 -108249523 + (CA)n Simple_repeat Simple_repeat 2 57 0 180 200 0 29 chr2 142439018 142439053 -108248801 - L2 LINE L2 -22 3250 3217 * 249 253 57 89 chr2 142439022 142439180 -108248674 - MIR SINE MIR -20 242 90 222 316 25 13 chr2 142439788 142439867 -108247987 + MIR3 SINE MIR 118 197 -11 253 315 98 11 chr2 142440989 142441081 -108246773 + L2 LINE L2 3208 3307 -6 214 28 28 28 chr2 142441776 142441812 -108246042 + (TG)n Simple_repeat Simple_repeat 1 36 0 2211 112 0 0 chr2 142443315 142443609 -108244245 + AluSc SINE Alu 1 294 -15 595 88 0 0 chr2 142443784 142443864 -108243990 + AluS SINE Alu 1 80 -232 537 250 108 0 chr2 142443887 142444099 -108243755 + L1MB7 LINE L1 4316 4550 -1596 2846 91 168 169 chr2 142444107 142445059 -108242795 + LTR12 LTR ERV1 57 714 0 1118 182 0 48 chr2 142445089 142445298 -108242556 + AluJb SINE Alu 90 288 -24 219 69 0 0 chr2 142445298 142445327 -108242527 + (TA)n Simple_repeat Simple_repeat 2 30 0 2933 224 68 12 chr2 142445327 142446650 -108241204 + L1MB7 LINE L1 4773 6172 -12 234 0 0 0 chr2 142446715 142446741 -108241113 + (A)n Simple_repeat Simple_repeat 1 26 0 198 235 12 99 chr2 142446992 142447073 -108240781 + MIR SINE MIR 119 192 -70 24 32 0 0 chr2 142447434 142447465 -108240389 + AT_rich Low_complexity Low_complexity 1 31 0 488 233 141 2 chr2 142447747 142447880 -108239974 - MIR SINE MIR -63 145 3 572 309 69 59 chr2 142449169 142449558 -108238296 + HAL1 LINE L1 1 393 -2114 314 192 107 35 chr2 142449874 142449967 -108237887 + MLT1J LTR MaLR 82 173 -236 * 703 266 123 57 chr2 142449960 142450475 -108237379 + MLT1G LTR MaLR 11 555 0 294 271 66 20 chr2 142450624 142450775 -108237079 + MLT1J1 LTR MaLR 287 444 -2 1212 266 106 80 chr2 142450873 142451413 -108236441 + HAL1 LINE L1 751 1275 -1232 2400 100 0 3 chr2 142451413 142451724 -108236130 + AluSx SINE Alu 1 310 -2 1212 266 106 80 chr2 142451724 142451768 -108236086 + HAL1 LINE L1 1275 1316 -1191 1342 50 0 11 chr2 142451768 142451949 -108235905 + (GAA)n Simple_repeat Simple_repeat 2 180 0 1212 266 106 80 chr2 142451949 142453049 -108234805 + HAL1 LINE L1 1316 2481 -26 288 53 0 0 chr2 142453271 142453309 -108234545 + (CA)n Simple_repeat Simple_repeat 2 39 0 300 297 59 30 chr2 142453363 142453464 -108234390 - L2 LINE L2 -20 3293 3190 391 283 145 0 chr2 142454245 142454390 -108233464 - MIR SINE MIR 0 262 97 2258 178 39 2 chr2 142454468 142454879 -108232975 - MSTB LTR MaLR 0 426 1 270 0 0 0 chr2 142454923 142454953 -108232901 + (CA)n Simple_repeat Simple_repeat 1 30 0 753 151 14 0 chr2 142455043 142455182 -108232672 + L1MB4 LINE L1 6036 6176 -4 745 255 144 38 chr2 142455226 142455567 -108232287 + L2 LINE L2 2152 2528 -786 1128 168 34 10 chr2 142455571 142455780 -108232074 - MER20 DNA MER1_type 0 219 6 1160 254 62 50 chr2 142455785 142456560 -108231294 + L2 LINE L2 2525 3312 -1 265 260 21 98 chr2 142457363 142457598 -108230256 + L1MC4a LINE L1 5695 5911 -1897 690 287 47 21 chr2 142457666 142458106 -108229748 + LTR33 LTR ERVL 42 519 -2 404 337 133 46 chr2 142461025 142461798 -108226056 - L2 LINE L2 -168 3104 2262 4362 53 2 0 chr2 142461984 142462564 -108225290 - L1P LINE L1 -3355 2791 2211 8180 39 6 0 chr2 142462564 142464328 -108223526 + L1PA5 LINE L1 4381 6149 -5 280 292 0 31 chr2 142465004 142465069 -108222785 - MER91 DNA MER1_type -1 189 127 2047 132 13 0 chr2 142466810 142467114 -108220740 - AluSx SINE Alu -4 308 1 21 36 0 0 chr2 142467670 142467698 -108220156 + AT_rich Low_complexity Low_complexity 1 28 0 404 288 110 7 chr2 142467896 142468042 -108219812 - MIR SINE MIR -26 236 76 202 306 48 40 chr2 142468238 142468362 -108219492 - MIR SINE MIR -63 145 21 293 310 41 35 chr2 142468402 142468547 -108219307 + MIR SINE MIR 117 262 0 192 325 138 12 chr2 142468599 142468679 -108219175 + L3b LINE CR1 1486 1575 -8 186 237 8 119 chr2 142468717 142468835 -108219019 - MIR SINE MIR -68 194 90 813 103 17 0 chr2 142469202 142469318 -108218536 - AluSg/x SINE Alu -1 311 194 767 137 13 105 chr2 142469374 142469527 -108218327 - AluSq SINE Alu -136 177 39 315 51 34 34 chr2 142469611 142469670 -108218184 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 237 206 44 29 chr2 142469773 142469841 -108218013 + MLT1J LTR MaLR 112 180 -331 266 269 71 61 chr2 142469957 142470169 -108217685 + MLT1J LTR MaLR 277 490 -21 1374 272 188 40 chr2 142470756 142471912 -108215942 + L2 LINE L2 1982 3309 -4 2235 114 0 0 chr2 142472193 142472491 -108215363 - AluSg SINE Alu -12 298 1 313 75 38 0 chr2 142474140 142474193 -108213661 + (TG)n Simple_repeat Simple_repeat 2 56 0 393 269 199 54 chr2 142476806 142477103 -108210751 - L3 LINE CR1 -118 1459 1120 292 206 16 0 chr2 142477111 142477174 -108210680 - LTR16A1 LTR ERVL -332 125 62 2143 111 16 0 chr2 142477432 142477738 -108210116 + AluY SINE Alu 1 311 0 203 296 14 70 chr2 142478003 142478074 -108209780 + L2 LINE L2 3236 3302 -11 241 132 0 0 chr2 142478771 142478809 -108209045 - 5S rRNA rRNA -83 38 1 211 261 25 101 chr2 142479369 142479488 -108208366 - L2 LINE L2 -1075 2239 2130 289 413 62 18 chr2 142479522 142479798 -108208056 + L2 LINE L2 2936 3223 -49 2412 224 58 4 chr2 142480054 142480568 -108207286 + MLT1F LTR MaLR 1 542 0 399 346 60 22 chr2 142480733 142480918 -108206936 + MIR SINE MIR 60 251 -11 330 289 24 0 chr2 142481174 142481257 -108206597 - L2 LINE L2 0 3313 3229 2054 233 187 28 chr2 142481257 142482014 -108205840 - L2 LINE L2 -302 3011 2133 1136 44 0 0 chr2 142482124 142482259 -108205595 + AluY SINE Alu 166 300 -11 220 300 67 54 chr2 142484213 142484436 -108203418 + L3b LINE CR1 1154 1379 -204 218 81 27 0 chr2 142484636 142484673 -108203181 + (TG)n Simple_repeat Simple_repeat 2 39 0 2126 121 7 7 chr2 142485459 142485757 -108202097 + AluSx SINE Alu 1 298 -14 792 283 115 54 chr2 142486057 142486505 -108201349 - L2 LINE L2 -2 3311 2822 2132 116 7 3 chr2 142486505 142486635 -108201219 + AluSx SINE Alu 3 131 -181 401 0 20 0 chr2 142486635 142486684 -108201170 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 2132 116 7 3 chr2 142486684 142486855 -108200999 + AluSx SINE Alu 131 305 -7 792 283 115 54 chr2 142486855 142486949 -108200905 - L2 LINE L2 -491 2822 2735 3353 257 68 31 chr2 142487852 142489184 -108198670 + L1MC4 LINE L1 6465 7845 -197 354 171 0 0 chr2 142489184 142489254 -108198600 + (CA)n Simple_repeat Simple_repeat 1 70 0 1785 203 87 79 chr2 142489646 142489913 -108197941 - MLT1E2 LTR MaLR 0 626 363 416 34 0 17 chr2 142489913 142489972 -108197882 + (TTTTG)n Simple_repeat Simple_repeat 3 60 0 1785 203 87 79 chr2 142489972 142490325 -108197529 - MLT1E2 LTR MaLR -263 363 1 306 326 53 77 chr2 142490360 142490697 -108197157 + MLT1H LTR MaLR 23 351 -198 330 324 36 68 chr2 142490793 142491015 -108196839 + L1MEd LINE L1 967 1181 -4938 30 59 0 0 chr2 142491512 142491563 -108196291 + AT_rich Low_complexity Low_complexity 1 51 0 360 333 75 20 chr2 142491595 142491850 -108196004 + L1ME3A LINE L1 5368 5636 -534 385 349 12 4 chr2 142491906 142492158 -108195696 + L1ME3A LINE L1 5667 5920 -250 235 315 137 7 chr2 142492920 142493066 -108194788 + MIR SINE MIR 91 255 -7 209 349 36 0 chr2 142493211 142493294 -108194560 + MIR SINE MIR 91 176 -86 877 211 27 5 chr2 142493833 142494018 -108193836 + MER5A DNA MER1_type 1 189 0 295 222 28 14 chr2 142494117 142494189 -108193665 + L3 LINE CR1 1488 1560 -17 21 0 0 0 chr2 142495811 142495832 -108192022 + AT_rich Low_complexity Low_complexity 1 21 0 404 339 64 11 chr2 142497288 142497571 -108190283 - LTR16A LTR ERVL -75 375 78 813 245 160 53 chr2 142497633 142497772 -108190082 + LTR33A LTR ERVL 3 126 -397 336 24 0 0 chr2 142497772 142497813 -108190041 + (TC)n Simple_repeat Simple_repeat 2 42 0 813 245 160 53 chr2 142497813 142498142 -108189712 + LTR33A LTR ERVL 126 521 -2 185 363 169 8 chr2 142498634 142498758 -108189096 + L2 LINE L2 3104 3247 -25 399 312 68 34 chr2 142499325 142499530 -108188324 - MIR SINE MIR -10 252 41 328 338 15 8 chr2 142500398 142500531 -108187323 + L2 LINE L2 2205 2338 -976 2207 119 0 10 chr2 142500650 142500962 -108186892 - AluSc SINE Alu 0 309 1 513 284 98 19 chr2 142501047 142501262 -108186592 + MIR SINE MIR 23 254 -8 563 322 112 50 chr2 142501478 142501873 -108185981 + L2 LINE L2 2643 3092 -180 2344 111 0 0 chr2 142501873 142502179 -108185675 - AluSq SINE Alu -7 306 1 563 322 112 50 chr2 142502179 142502371 -108185483 + L2 LINE L2 3092 3271 -1 355 269 129 21 chr2 142504189 142504375 -108183479 - MIR SINE MIR -48 214 9 1891 265 111 68 chr2 142504569 142505736 -108182118 - L2 LINE L2 -50 3263 2053 2358 86 3 0 chr2 142508889 142509192 -108178662 - AluY SINE Alu -7 304 1 312 211 138 28 chr2 142509429 142509538 -108178316 + MIR SINE MIR 58 178 -84 1659 179 139 47 chr2 142509651 142510073 -108177781 + MLT2B1 LTR ERVL 1 472 -48 243 0 0 0 chr2 142510073 142510100 -108177754 + (CA)n Simple_repeat Simple_repeat 2 28 0 1659 179 139 47 chr2 142510100 142510146 -108177708 + MLT2B1 LTR ERVL 472 512 -8 196 317 108 17 chr2 142510154 142510274 -108177580 - L2 LINE L2 -10 3303 3173 317 313 177 10 chr2 142510814 142511012 -108176842 + MIR SINE MIR 32 262 0 186 43 0 0 chr2 142512128 142512151 -108175703 + (TG)n Simple_repeat Simple_repeat 1 23 0 21 36 0 0 chr2 142512323 142512351 -108175503 + AT_rich Low_complexity Low_complexity 1 28 0 287 294 10 144 chr2 142512664 142512865 -108174989 + MIR3 SINE MIR 16 189 -19 805 343 192 4 chr2 142513301 142514017 -108173837 - L2 LINE L2 -8 3264 2404 204 146 24 0 chr2 142514290 142514331 -108173523 + (CA)n Simple_repeat Simple_repeat 2 43 0 282 87 0 0 chr2 142514460 142514506 -108173348 + (TC)n Simple_repeat Simple_repeat 1 46 0 1422 210 7 108 chr2 142516223 142516426 -108171428 + MLT1D LTR MaLR 1 223 -282 1947 138 10 0 chr2 142516426 142516716 -108171138 + AluSx SINE Alu 1 293 -19 1422 210 7 108 chr2 142516716 142517068 -108170786 + MLT1D LTR MaLR 223 500 -5 705 306 44 16 chr2 142518077 142518325 -108169529 + MIR SINE MIR 8 262 0 230 270 135 18 chr2 142519420 142519531 -108168323 - MER5A DNA MER1_type -25 164 41 294 209 44 88 chr2 142519705 142519796 -108168058 + MIR SINE MIR 105 191 -71 1705 245 58 58 chr2 142521295 142522014 -108165840 - L1MC4 LINE L1 -43 7999 7281 949 270 142 31 chr2 142522036 142522451 -108165403 - L2 LINE L2 -9 3304 2844 7234 17 1 0 chr2 142523721 142524595 -108163259 - L1PA2 LINE L1 -3 6152 5278 3529 36 17 2 chr2 142524594 142525064 -108162790 + L1PA2 LINE L1 4833 5309 -837 * 665 264 70 25 chr2 142525523 142525837 -108162017 + L1ME4a LINE L1 5511 5838 -283 1874 163 7 0 chr2 142526103 142526398 -108161456 + AluSx SINE Alu 9 305 -7 1204 213 57 39 chr2 142527128 142527462 -108160392 - MER58B DNA MER1_type 0 341 2 2267 83 0 23 chr2 142527597 142527898 -108159956 + AluY SINE Alu 18 311 0 201 295 86 48 chr2 142528267 142528372 -108159482 + MIR SINE MIR 37 145 -63 622 325 54 0 chr2 142529508 142529748 -108158106 + MIR SINE MIR 10 262 0 615 299 58 4 chr2 142530332 142530606 -108157248 - MER102b DNA MER1_type -9 332 44 273 314 83 32 chr2 142532272 142532428 -108155426 - MER91A DNA MER1_type -31 165 2 357 311 9 0 chr2 142532429 142532535 -108155319 + L2 LINE L2 2554 2660 -654 2265 199 48 0 chr2 142533022 142533519 -108154335 + L1MB7 LINE L1 5620 6140 -44 482 254 42 3 chr2 142533651 142533823 -108154031 + MLT1H LTR MaLR 4 193 -374 249 203 0 17 chr2 142535212 142535239 -108152615 + (CA)n Simple_repeat Simple_repeat 2 28 -31 977 213 37 81 chr2 142535239 142535620 -108152234 + MLT1A1 LTR MaLR 2 365 0 249 203 0 17 chr2 142535620 142535651 -108152203 + (CA)n Simple_repeat Simple_repeat 28 59 0 2110 118 7 23 chr2 142538513 142538817 -108149037 - AluSx SINE Alu -13 299 1 9850 240 28 32 chr2 142539318 142539990 -108147864 + L1P LINE L1 1690 2364 -3782 2117 110 14 0 chr2 142539990 142540280 -108147574 - AluSx SINE Alu -18 294 1 9850 240 28 32 chr2 142540280 142542997 -108144857 + L1P LINE L1 2364 5064 -1082 362 313 106 22 chr2 142543146 142543373 -108144481 + MIR SINE MIR 17 262 0 238 297 94 14 chr2 142543395 142543461 -108144393 - L3 LINE CR1 -301 1276 1217 1827 159 0 29 chr2 142543461 142543770 -108144084 - AluJb SINE Alu -12 300 1 238 297 94 14 chr2 142543770 142543841 -108144013 - L3 LINE CR1 -360 1217 1128 663 293 36 40 chr2 142544579 142544832 -108143022 + MIR SINE MIR 7 258 -4 242 207 29 130 chr2 142545543 142545664 -108142190 - MIR SINE MIR -88 120 3 823 244 39 39 chr2 142546326 142546580 -108141274 - MIR SINE MIR 0 262 9 1016 194 6 0 chr2 142546580 142546755 -108141099 + MER20 DNA MER1_type 1 176 -43 396 257 271 0 chr2 142546825 142546965 -108140889 + MER5A DNA MER1_type 12 189 0 359 285 0 116 chr2 142548204 142548376 -108139478 - MER5A DNA MER1_type -21 168 17 610 236 166 0 chr2 142549425 142549582 -108138272 + MER5A DNA MER1_type 7 189 0 522 299 100 58 chr2 142549728 142550316 -108137538 + MLT1L LTR MaLR 1 613 -2 401 311 25 0 chr2 142550362 142550481 -108137373 - MIR SINE MIR -53 209 88 22 56 0 0 chr2 142552293 142552329 -108135525 + AT_rich Low_complexity Low_complexity 1 36 0 427 208 63 0 chr2 142552408 142552627 -108135227 + L1MA4A LINE L1 5987 6280 -23 1492 144 29 64 chr2 142552943 142553381 -108134473 - Tigger5 DNA MER2_type 0 2323 2 2243 24 14 3 chr2 142554719 142555010 -108132844 + L1PA2 LINE L1 5807 6100 -55 414 247 11 0 chr2 142555113 142555202 -108132652 + MER5A DNA MER1_type 16 105 -84 829 286 112 42 chr2 142555258 142555746 -108132108 + L2 LINE L2 2793 3313 0 966 178 214 50 chr2 142556023 142556326 -108131528 + L1MC3 LINE L1 5481 5833 -1952 3682 186 90 79 chr2 142556359 142556916 -108130938 + L1MC3 LINE L1 6230 6779 -1006 2486 64 3 0 chr2 142556916 142557212 -108130642 + AluY SINE Alu 1 297 -14 3682 186 90 79 chr2 142557212 142557482 -108130372 + L1MC3 LINE L1 6779 7045 -740 260 239 0 28 chr2 142557482 142557553 -108130301 + MLT1F1 LTR MaLR 36 104 -463 3682 186 90 79 chr2 142557553 142558177 -108129677 + L1MC3 LINE L1 7045 7778 -7 378 350 94 9 chr2 142558249 142558472 -108129382 - MIR SINE MIR -12 250 9 733 206 38 24 chr2 142558712 142558921 -108128933 - LTR33 LTR ERVL -5 516 305 450 259 0 76 chr2 142558990 142559175 -108128679 - LTR33 LTR ERVL -350 171 1 260 236 0 0 chr2 142559518 142559573 -108128281 - LTR33 LTR ERVL -383 138 84 404 37 19 0 chr2 142560284 142560338 -108127516 + (TG)n Simple_repeat Simple_repeat 1 55 0 317 258 153 8 chr2 142560421 142560545 -108127309 - MIR SINE MIR -65 197 56 2541 184 14 21 chr2 142560624 142561141 -108126713 + MLT2B1 LTR ERVL 8 520 0 330 26 0 0 chr2 142562037 142562076 -108125778 + (TA)n Simple_repeat Simple_repeat 2 40 0 274 58 58 0 chr2 142562515 142562567 -108125287 + (TATAA)n Simple_repeat Simple_repeat 4 58 0 204 305 21 32 chr2 142563938 142564033 -108123821 + MIR3 SINE MIR 115 208 0 184 317 143 19 chr2 142564171 142564332 -108123522 - L2 LINE L2 -156 3116 2936 261 0 0 0 chr2 142564423 142564452 -108123402 + (TC)n Simple_repeat Simple_repeat 2 30 0 249 260 40 50 chr2 142566656 142566756 -108121098 + MER20B DNA MER1_type 96 194 -589 230 305 47 31 chr2 142568044 142568172 -108119682 - MLT1J LTR MaLR -314 197 68 287 261 0 0 chr2 142568684 142568749 -108119105 - L2 LINE L2 0 3313 3249 207 88 0 0 chr2 142568843 142568877 -108118977 + (TAAAAA)n Simple_repeat Simple_repeat 1 34 0 432 51 0 0 chr2 142568925 142568984 -108118870 + (CA)n Simple_repeat Simple_repeat 1 59 0 584 242 72 31 chr2 142571839 142572033 -108115821 - L2 LINE L2 -5 3308 3107 366 78 90 18 chr2 142572045 142572211 -108115643 + (TA)n Simple_repeat Simple_repeat 2 179 0 35 24 0 0 chr2 142572223 142572265 -108115589 + AT_rich Low_complexity Low_complexity 1 42 0 447 363 40 15 chr2 142572273 142572474 -108115380 - L2 LINE L2 -217 3096 2891 * 2490 272 81 46 chr2 142572467 142573388 -108114466 - L2 LINE L2 -635 2679 1717 347 60 20 0 chr2 142573388 142573438 -108114416 + (TG)n Simple_repeat Simple_repeat 2 52 0 2490 272 81 46 chr2 142573438 142573545 -108114309 - L2 LINE L2 -1597 1717 1615 4795 275 62 72 chr2 142573635 142574904 -108112950 + MER89-int LTR ERV1 179 1422 -5379 3081 42 5 0 chr2 142574904 142575282 -108112572 + L1PA5 LINE L1 5767 6146 -8 4795 275 62 72 chr2 142575282 142576125 -108111729 + MER89-int LTR ERV1 1422 2271 -4530 2122 218 62 44 chr2 142576151 142577041 -108110813 + MER89-int LTR ERV1 364 3464 -3337 1241 247 75 27 chr2 142577091 142577463 -108110391 + MER89-int LTR ERV1 3561 3950 -2851 237 239 64 37 chr2 142577499 142577608 -108110246 - L1M4 LINE L1 -3813 2333 2222 673 320 36 8 chr2 142577614 142577973 -108109881 + L1PA12 LINE L1 11 379 -7202 288 0 0 0 chr2 142579839 142579871 -108107983 + (TG)n Simple_repeat Simple_repeat 1 32 0 21 36 0 0 chr2 142579992 142580020 -108107834 + AT_rich Low_complexity Low_complexity 1 28 0 3404 262 82 15 chr2 142580971 142581285 -108106569 + L1ME1 LINE L1 2016 2307 -3908 2163 202 49 18 chr2 142581285 142581775 -108106079 + MLT1D LTR MaLR 1 505 0 3404 262 82 15 chr2 142581775 142583277 -108104577 + L1ME1 LINE L1 2307 3920 -2295 322 198 38 19 chr2 142583315 142583421 -108104433 + L1ME1 LINE L1 5218 5325 -890 2523 217 22 22 chr2 142583422 142584112 -108103742 + L1ME1 LINE L1 5373 6062 -173 2312 168 39 11 chr2 142584169 142584634 -108103220 - L1MC1 LINE L1 -6 6327 5850 3525 157 46 40 chr2 142584710 142585494 -108102360 + L1MB8 LINE L1 5381 6169 -9 357 43 0 0 chr2 142586697 142586744 -108101110 + (CA)n Simple_repeat Simple_repeat 2 48 0 247 391 55 0 chr2 142587196 142587306 -108100548 + L2 LINE L2 3137 3252 -20 821 179 0 35 chr2 142587315 142587516 -108100338 + L1MA4 LINE L1 6106 6299 -1 257 284 95 45 chr2 142589543 142589765 -108098089 + L1MC4 LINE L1 7216 7448 -594 380 302 82 36 chr2 142589790 142590079 -108097775 + L1MC4 LINE L1 7321 7728 -314 253 250 61 44 chr2 142590107 142590287 -108097567 + L1ME4a LINE L1 5928 6110 -11 249 333 85 30 chr2 142590472 142590637 -108097217 - MIR SINE MIR -41 221 48 269 259 133 16 chr2 142592212 142592544 -108095310 + LTR33 LTR ERVL 37 414 -109 247 330 85 25 chr2 142592835 142592953 -108094901 - L2 LINE L2 -40 3232 3108 1437 170 36 12 chr2 142593087 142593417 -108094437 - L1MA8 LINE L1 -2 6289 5952 416 316 94 20 chr2 142594341 142594585 -108093269 - L2 LINE L2 -1367 1947 1686 220 280 0 0 chr2 142595000 142595050 -108092804 + (TG)n Simple_repeat Simple_repeat 1 50 0 188 444 76 0 chr2 142596656 142596800 -108091054 - L2 LINE L2 -19 3253 3099 219 366 114 8 chr2 142596807 142596930 -108090924 + L2 LINE L2 3129 3264 -8 21 0 0 0 chr2 142597005 142597026 -108090828 + AT_rich Low_complexity Low_complexity 1 21 0 261 257 170 29 chr2 142597752 142597923 -108089931 + L3b LINE CR1 1190 1384 -199 1158 201 46 3 chr2 142598179 142598463 -108089391 + MER33 DNA MER1_type 7 302 -22 442 236 71 39 chr2 142598546 142598673 -108089181 + MIR SINE MIR 119 249 -13 570 286 68 16 chr2 142598674 142598866 -108088988 - L3 LINE CR1 -42 1535 1334 365 337 16 43 chr2 142599715 142599902 -108087952 + MIR SINE MIR 23 204 -58 329 43 21 0 chr2 142604371 142604418 -108083436 + (CA)n Simple_repeat Simple_repeat 2 49 0 249 196 0 0 chr2 142604847 142604903 -108082951 + (CA)n Simple_repeat Simple_repeat 2 57 0 680 224 143 66 chr2 142608776 142609062 -108078792 - L2 LINE L2 -2 3311 3004 * 852 304 36 4 chr2 142609056 142609309 -108078545 - MIR SINE MIR 0 262 2 219 285 295 37 chr2 142609342 142609640 -108078214 - L2 LINE L2 -353 2961 2587 660 279 103 31 chr2 142610636 142610926 -108076928 + L2 LINE L2 3000 3310 -3 4773 100 304 88 chr2 142610930 142612334 -108075520 - pTR5 LTR ERV1 0 2438 377 239 350 100 33 chr2 142612623 142612743 -108075111 + L2 LINE L2 3140 3267 -5 311 322 168 40 chr2 142612891 142613093 -108074761 - L2 LINE L2 0 3272 3045 225 391 68 14 chr2 142613358 142613578 -108074276 + L2 LINE L2 2021 2252 -1062 477 257 59 55 chr2 142613578 142613612 -108074242 - MLT1I LTR MaLR 0 409 377 192 40 0 0 chr2 142613612 142613637 -108074217 + (TAA)n Simple_repeat Simple_repeat 1 25 0 477 257 59 55 chr2 142613637 142613804 -108074050 - MLT1I LTR MaLR -32 377 207 190 286 57 0 chr2 142613995 142614065 -108073789 + L2 LINE L2 2271 2344 -970 1077 301 125 15 chr2 142614082 142614857 -108072997 + L2 LINE L2 2447 3296 -17 2392 68 7 3 chr2 142614873 142615169 -108072685 + AluY SINE Alu 5 301 -10 421 280 24 8 chr2 142616589 142616714 -108071140 - MIR3 SINE MIR 0 208 82 446 352 55 47 chr2 142617370 142617734 -108070120 + L2 LINE L2 2265 2631 -683 237 273 0 0 chr2 142617888 142617943 -108069911 - L3 LINE CR1 -207 1370 1316 5228 144 34 9 chr2 142618046 142619064 -108068790 + L1PA16 LINE L1 5123 6166 0 293 280 56 32 chr2 142619084 142619209 -108068645 + MER89-int LTR ERV1 3992 4119 -2682 1170 113 6 0 chr2 142619212 142619380 -108068474 + AluSg/x SINE Alu 135 303 -9 2264 249 53 50 chr2 142619396 142620131 -108067723 + MER89-int LTR ERV1 4113 4849 -1952 584 133 0 57 chr2 142620143 142620248 -108067606 - FLAM_C SINE Alu -12 131 33 3457 206 27 23 chr2 142620263 142620916 -108066938 + MER89-int LTR ERV1 5487 6145 -656 5164 132 50 3 chr2 142620916 142622237 -108065617 - L1PB3 LINE L1 -7 6147 4802 3457 206 27 23 chr2 142622237 142622324 -108065530 + MER89-int LTR ERV1 6145 6230 -571 2417 144 47 7 chr2 142622324 142622727 -108065127 - MSTA LTR MaLR 0 428 10 1621 191 64 3 chr2 142622742 142623243 -108064611 + MER89-int LTR ERV1 6226 6798 -3 1714 233 12 16 chr2 142623249 142623707 -108064147 + MER89 LTR ERV1 5 559 0 4525 134 14 1 chr2 142624496 142625210 -108062644 - L1PA16 LINE L1 -1 6165 5443 500 0 17 0 chr2 142625211 142625271 -108062583 + (TTTTG)n Simple_repeat Simple_repeat 1 61 0 2797 216 8 20 chr2 142625271 142625906 -108061948 - L1PA16 LINE L1 -973 5173 4547 500 274 32 8 chr2 142626682 142626806 -108061048 + MER5A DNA MER1_type 63 189 0 201 360 40 0 chr2 142627185 142627285 -108060569 - MIR SINE MIR -67 195 92 195 129 0 0 chr2 142627592 142627623 -108060231 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 272 268 0 0 chr2 142627948 142628019 -108059835 + MLT1K LTR MaLR 486 556 -32 2236 19 0 0 chr2 142628115 142628374 -108059480 - L1PA4 LINE L1 -2002 4144 3886 * 10593 31 1 1 chr2 142628368 142630331 -108057523 + L1PA4 LINE L1 4126 6090 -65 1464 208 36 11 chr2 142631310 142631589 -108056265 - AluJo SINE Alu -26 286 1 2252 107 3 3 chr2 142631730 142632029 -108055825 - AluSc SINE Alu -10 299 1 930 178 0 63 chr2 142684480 142684654 -108003200 + FAM SINE Alu 1 163 -12 336 363 34 6 chr2 142684669 142684848 -108003006 + MIR SINE MIR 30 213 -49 235 255 20 78 chr2 142685135 142685237 -108002617 - L2 LINE L2 -1045 2269 2174 403 269 21 7 chr2 142685258 142685399 -108002455 - L1M4 LINE L1 -2352 3794 3652 1459 295 55 66 chr2 142685405 142686404 -108001450 - L1MEd LINE L1 -4906 1213 226 457 299 43 24 chr2 142686479 142686690 -108001164 - L1MEd LINE L1 -5899 220 6 201 74 0 0 chr2 142687460 142687487 -108000367 + (TC)n Simple_repeat Simple_repeat 1 27 0 472 290 60 11 chr2 142688831 142689014 -107998840 - MIR SINE MIR -15 247 56 654 77 0 0 chr2 142690557 142690635 -107997219 + MADE1 DNA Mariner 1 78 -2 440 209 27 27 chr2 142691395 142691505 -107996349 - MER103 DNA DNA -49 117 8 327 146 0 0 chr2 142691650 142691705 -107996149 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 247 250 83 14 chr2 142692664 142692736 -107995118 - L2 LINE L2 0 3272 3196 322 287 69 51 chr2 142692909 142693125 -107994729 - L2 LINE L2 -390 2924 2705 633 243 69 14 chr2 142693141 142693359 -107994495 - L1MC5 LINE L1 -36 7925 7696 458 343 99 41 chr2 142693362 142693404 -107994450 - L2 LINE L2 -598 2716 2678 1895 145 87 35 chr2 142693404 142693748 -107994106 + THE1B LTR MaLR 3 364 0 458 343 99 41 chr2 142693748 142694070 -107993784 - L2 LINE L2 -636 2678 2331 273 319 0 0 chr2 142694575 142694644 -107993210 + L2 LINE L2 3194 3262 -10 2302 110 0 0 chr2 142695222 142695522 -107992332 + AluSx SINE Alu 1 300 -12 2073 139 0 0 chr2 142695913 142696216 -107991638 + AluSq SINE Alu 1 303 -10 201 39 0 0 chr2 142696331 142696357 -107991497 + (T)n Simple_repeat Simple_repeat 1 26 0 279 304 13 0 chr2 142696540 142696619 -107991235 + L2 LINE L2 3191 3270 -2 752 132 62 16 chr2 142696838 142696967 -107990887 - L1PB1 LINE L1 -2 6149 6015 933 281 108 31 chr2 142698394 142698931 -107988923 - L2 LINE L2 0 3313 2739 500 268 92 7 chr2 142698932 142699074 -107988780 + MLT1F LTR MaLR 2 155 -387 768 218 4 90 chr2 142699074 142699135 -107988719 - MER20 DNA MER1_type -5 214 149 4137 131 22 16 chr2 142699135 142699782 -107988072 - MER39B LTR ERV1 0 653 3 768 218 4 90 chr2 142699782 142699954 -107987900 - MER20 DNA MER1_type -70 149 1 1820 181 87 13 chr2 142699955 142700325 -107987529 + MLT1F LTR MaLR 144 590 0 387 278 118 35 chr2 142700327 142700471 -107987383 - L2 LINE L2 -593 2721 2566 337 360 0 0 chr2 142700473 142700573 -107987281 - MER91B DNA MER1_type -1 189 90 382 250 65 24 chr2 142700593 142700644 -107987210 - MER91B DNA MER1_type -61 129 82 2138 109 31 0 chr2 142700644 142700938 -107986916 + AluSx SINE Alu 1 303 -9 382 250 65 24 chr2 142700938 142701010 -107986844 - MER91B DNA MER1_type -108 82 1 1008 306 39 65 chr2 142701061 142701600 -107986254 - L2 LINE L2 -812 2502 1978 943 207 120 0 chr2 142701717 142701925 -107985929 - MIR SINE MIR -22 240 8 341 348 62 30 chr2 142702556 142702861 -107984993 + LTR16C LTR ERVL 156 470 -21 344 325 91 7 chr2 142702975 142703129 -107984725 + MIR SINE MIR 24 190 -72 888 169 49 22 chr2 142704180 142704363 -107983491 - MER53 DNA DNA 0 189 2 215 356 30 30 chr2 142704385 142704517 -107983337 + MIR SINE MIR 81 212 -50 249 268 24 12 chr2 142704524 142704606 -107983248 + MIR SINE MIR 175 257 -5 205 209 23 0 chr2 142704616 142704659 -107983195 + (CATA)n Simple_repeat Simple_repeat 3 46 0 183 325 0 84 chr2 142704723 142704806 -107983048 - L2 LINE L2 -167 3105 3030 25 65 0 0 chr2 142705240 142705286 -107982568 + AT_rich Low_complexity Low_complexity 1 46 0 1389 189 70 14 chr2 142705719 142706005 -107981849 + AluJo SINE Alu 6 307 -5 198 354 43 93 chr2 142706006 142706167 -107981687 - L2 LINE L2 -86 3186 3034 194 313 18 71 chr2 142706628 142706740 -107981114 + MIR3 SINE MIR 5 110 -98 454 324 46 21 chr2 142706832 142707070 -107980784 - MIR SINE MIR -6 256 13 225 244 184 40 chr2 142707264 142707465 -107980389 - L1ME LINE L1 -201 5920 5691 229 248 118 26 chr2 142707662 142707815 -107980039 - L1ME LINE L1 -690 5431 5265 420 282 18 18 chr2 142708381 142708491 -107979363 - L2 LINE L2 0 3272 3163 596 249 0 117 chr2 142709166 142709371 -107978483 - L2 LINE L2 -12 3301 3121 5342 221 26 14 chr2 142709442 142711545 -107976309 + L1PA15 LINE L1 1026 3198 -3599 1764 161 44 3 chr2 142711542 142711858 -107975996 + L1PA15 LINE L1 5267 5595 -1202 * 1850 116 14 7 chr2 142711868 142712144 -107975710 - L1PA13 LINE L1 0 6163 5886 * 6180 109 33 0 chr2 142712142 142713346 -107974508 + L1PA15 LINE L1 5584 6816 0 290 229 111 59 chr2 142713347 142713500 -107974354 - L2 LINE L2 -220 3093 2933 900 269 123 57 chr2 142713502 142713908 -107973946 - MLT1J2 LTR MaLR -17 433 1 713 292 93 30 chr2 142713996 142714297 -107973557 - L2 LINE L2 -597 2717 2398 442 318 190 16 chr2 142714311 142714632 -107973222 - L2 LINE L2 -1849 1465 1089 1106 259 103 63 chr2 142714681 142715206 -107972648 + MER77 LTR ERV1 53 598 -7 2739 157 25 32 chr2 142715206 142715676 -107972178 + MLT1C LTR MaLR 1 467 0 1241 304 80 30 chr2 142715775 142716338 -107971516 - L2 LINE L2 -2292 1022 432 1223 197 13 4 chr2 142716558 142716786 -107971068 - MLT1A1 LTR MaLR -2 363 134 1423 171 4 19 chr2 142717955 142718218 -107969636 - L1MA7 LINE L1 -390 5901 5643 540 93 33 50 chr2 142718239 142718421 -107969433 + (TA)n Simple_repeat Simple_repeat 2 180 0 245 149 0 21 chr2 142718421 142718468 -107969386 - L1MA7 LINE L1 -535 5648 5603 630 283 53 22 chr2 142718500 142718726 -107969128 + MIR SINE MIR 20 252 -10 255 301 118 52 chr2 142721165 142721394 -107966460 + MIR SINE MIR 18 261 -1 438 309 157 0 chr2 142722428 142722680 -107965174 + L2 LINE L2 2768 3066 -247 1994 211 11 35 chr2 142722691 142723150 -107964704 - L1MCb LINE L1 -5072 973 526 23 0 0 0 chr2 142723365 142723388 -107964466 + AT_rich Low_complexity Low_complexity 1 23 0 302 279 130 72 chr2 142723508 142723716 -107964138 - MIR SINE MIR -17 245 26 1297 155 18 18 chr2 142724038 142724257 -107963597 + MER20 DNA MER1_type 1 219 0 2631 110 11 11 chr2 142724368 142724732 -107963122 - THE1B LTR MaLR 0 364 1 1930 133 72 35 chr2 142728638 142729001 -107958853 + THE1C LTR MaLR 4 375 0 246 282 81 48 chr2 142729006 142729130 -107958724 + MLT1J2 LTR MaLR 278 405 -45 489 328 33 16 chr2 142729391 142729574 -107958280 + MER5A DNA MER1_type 2 187 -2 445 241 17 17 chr2 142729687 142729803 -107958051 + L2 LINE L2 3198 3313 0 * 483 326 151 41 chr2 142729754 142730876 -107956978 - L2 LINE L2 -543 2771 1527 185 192 123 41 chr2 142731941 142732014 -107955840 - L2 LINE L2 -46 3226 3148 487 260 0 80 chr2 142732103 142732253 -107955601 + MER5B DNA MER1_type 1 138 -40 4046 205 75 3 chr2 142732262 142733174 -107954680 - L1MD1 LINE L1 0 6636 5660 27 0 0 0 chr2 142733191 142733218 -107954636 + AT_rich Low_complexity Low_complexity 1 27 0 672 249 6 0 chr2 142733218 142733387 -107954467 - L1MD1 LINE L1 -874 5666 5497 2652 233 68 20 chr2 142733387 142734152 -107953702 - L1MD1 LINE L1 -4537 2003 1202 280 179 36 0 chr2 142734157 142734213 -107953641 - MER112 DNA MER1_type -202 58 1 198 293 53 140 chr2 142734341 142734491 -107953363 + L2 LINE L2 3021 3157 -115 357 172 16 0 chr2 142734593 142734657 -107953197 + L1MC4 LINE L1 7208 7272 -770 307 197 49 0 chr2 142734656 142734717 -107953137 + L1MC4 LINE L1 7788 7851 -191 * 242 174 0 0 chr2 142734735 142734781 -107953073 + L1MD3 LINE L1 7942 7987 -8 1837 136 7 14 chr2 142735077 142735356 -107952498 + AluJo SINE Alu 6 282 -30 252 0 0 0 chr2 142735356 142735384 -107952470 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 334 308 83 58 chr2 142736339 142736495 -107951359 + MIR3 SINE MIR 21 180 -28 180 140 35 18 chr2 142736733 142736790 -107951064 + (TA)n Simple_repeat Simple_repeat 1 58 0 2254 124 0 7 chr2 142737406 142737713 -107950141 + AluSx SINE Alu 1 305 -7 227 325 24 0 chr2 142738336 142738419 -107949435 + L2 LINE L2 2569 2653 -661 487 312 57 7 chr2 142739804 142739945 -107947909 - L2 LINE L2 -9 3263 3116 180 0 0 0 chr2 142740237 142740257 -107947597 + (A)n Simple_repeat Simple_repeat 1 20 0 488 202 115 38 chr2 142741031 142741214 -107946640 + LTR33 LTR ERVL 307 503 -18 1798 63 45 66 chr2 142742791 142743077 -107944777 - L1PA8 LINE L1 -7 6165 5886 363 290 65 51 chr2 142743298 142743436 -107944418 + L2 LINE L2 3126 3265 -7 180 229 0 0 chr2 142743443 142743478 -107944376 - L2 LINE L2 -23 3249 3215 380 300 10 27 chr2 142743520 142743695 -107944159 - MIR SINE MIR -32 230 1 266 342 0 42 chr2 142745832 142745952 -107941902 + L2 LINE L2 2633 2747 -567 247 349 24 0 chr2 142746585 142746668 -107941186 + MIR SINE MIR 21 105 -157 471 287 32 53 chr2 142746676 142746864 -107940990 + MIR SINE MIR 79 262 0 326 242 101 0 chr2 142747088 142747187 -107940667 + MIR SINE MIR 149 257 -5 1921 179 0 0 chr2 142747815 142748116 -107939738 + AluJb SINE Alu 1 301 -11 458 183 15 66 chr2 142748679 142748816 -107939038 - Charlie2a DNA MER1_type -1 2861 2732 942 168 12 0 chr2 142748819 142748980 -107938874 + AluSg/x SINE Alu 137 299 -13 752 192 54 12 chr2 142749011 142749178 -107938676 - Charlie2a DNA MER1_type -1202 1660 1487 371 237 76 34 chr2 142749378 142749417 -107938437 - Charlie2a DNA MER1_type -2549 313 277 257 0 30 0 chr2 142749417 142749450 -107938404 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 371 237 76 34 chr2 142749450 142749528 -107938326 - Charlie2a DNA MER1_type -2585 277 191 356 159 0 0 chr2 142749530 142749593 -107938261 + Alu SINE Alu 238 300 0 240 169 0 46 chr2 142749598 142749663 -107938191 + L1 LINE L1 4978 5039 -1107 1374 114 0 0 chr2 142749696 142749880 -107937974 - L1PA8A LINE L1 0 6131 5948 2055 68 8 0 chr2 142750318 142750569 -107937285 - AluY SINE Alu -15 296 44 205 256 0 0 chr2 142750598 142750641 -107937213 + L2 LINE L2 3179 3221 -92 1749 198 0 3 chr2 142752345 142752648 -107935206 - AluJo SINE Alu -10 302 1 195 273 13 65 chr2 142753628 142753705 -107934149 - L2 LINE L2 -66 3206 3134 3219 19 3 0 chr2 142753858 142754221 -107933633 - L1PA2 LINE L1 -356 5799 5436 3150 18 0 0 chr2 142754221 142754561 -107933293 + L1PA2 LINE L1 5816 6155 0 271 347 66 0 chr2 142754571 142754692 -107933162 - L2 LINE L2 -262 3010 2882 1702 166 29 7 chr2 142755063 142755341 -107932513 + AluJb SINE Alu 1 284 -28 1671 117 22 5 chr2 142756792 142757091 -107930763 + THE1B LTR MaLR 1 364 0 3206 74 7 154 chr2 142757091 142757700 -107930154 + THE1B-int LTR MaLR 1 519 -1061 954 202 40 20 chr2 142757697 142757895 -107929959 + L1M4c LINE L1 314 515 -5869 * 42012 64 8 1 chr2 142758020 142764132 -107923722 - L1PA5 LINE L1 0 6154 1 8534 155 43 51 chr2 142764127 142765647 -107922207 + L1M4c LINE L1 496 2028 -4356 * 2147 125 10 0 chr2 142765647 142765936 -107921918 - AluSg SINE Alu -16 294 3 8534 155 43 51 chr2 142765936 142765958 -107921896 + L1M4c LINE L1 2028 2049 -4335 1151 204 73 0 chr2 142765958 142766178 -107921676 - MER46A DNA MER2_type 0 236 1 8534 155 43 51 chr2 142766178 142766510 -107921344 + L1M4c LINE L1 2049 2355 -4029 2160 154 11 26 chr2 142766518 142766900 -107920954 + L1MB3 LINE L1 5800 6175 -8 235 217 66 47 chr2 142766954 142767060 -107920794 + L1MEd LINE L1 51 158 -5961 288 0 0 0 chr2 142767244 142767276 -107920578 + (GA)n Simple_repeat Simple_repeat 2 33 0 273 185 74 0 chr2 142767350 142767404 -107920450 + MLT1B LTR MaLR 1 58 -316 693 201 26 19 chr2 142767426 142767580 -107920274 + MLT1B LTR MaLR 236 390 0 219 69 0 0 chr2 142767826 142767855 -107919999 + (CA)n Simple_repeat Simple_repeat 2 30 0 540 290 31 6 chr2 142768038 142768200 -107919654 + MIR SINE MIR 49 214 -48 439 285 26 40 chr2 142769422 142769573 -107918281 + MIR SINE MIR 53 201 -61 1595 243 68 14 chr2 142769953 142770513 -107917341 + MER20B DNA MER1_type 182 771 -12 13529 121 23 56 chr2 142770625 142772988 -107914866 + Tigger1 DNA MER2_type 1 2280 -138 1800 130 38 20 chr2 142772988 142773281 -107914573 + AluSq SINE Alu 1 298 -15 13529 121 23 56 chr2 142773281 142773410 -107914444 + Tigger1 DNA MER2_type 2280 2412 -6 424 305 23 0 chr2 142774164 142774295 -107913559 + MER5A DNA MER1_type 35 168 -21 953 141 50 55 chr2 142774370 142774545 -107913309 + ORSL DNA AcHobo 14 189 -86 2477 27 40 7 chr2 142774545 142774843 -107913011 + AluY SINE Alu 1 308 -3 953 141 50 55 chr2 142774843 142774887 -107912967 + ORSL DNA AcHobo 189 232 -43 521 310 148 0 chr2 142775262 142775465 -107912389 - MIR SINE MIR -28 234 2 183 262 66 0 chr2 142775782 142775843 -107912011 - L2 LINE L2 0 3272 3208 209 235 59 44 chr2 142777223 142777291 -107910563 + L2 LINE L2 339 407 -2907 215 292 0 0 chr2 142778164 142778212 -107909642 + MIR SINE MIR 66 113 -149 777 315 84 26 chr2 142778216 142778714 -107909140 - L2 LINE L2 -829 2485 1959 441 233 69 79 chr2 142778737 142778926 -107908928 + LTR16C LTR ERVL 303 489 -2 201 283 0 0 chr2 142779522 142779568 -107908286 + L2 LINE L2 3223 3268 -4 310 295 21 0 chr2 142779670 142779765 -107908089 - MIR3 SINE MIR -54 154 58 724 178 0 31 chr2 142780046 142780175 -107907679 + AluJb SINE Alu 3 127 -185 249 33 0 0 chr2 142782566 142782596 -107905258 + (T)n Simple_repeat Simple_repeat 1 30 0 527 186 100 14 chr2 142783422 142783632 -107904222 - Charlie5 DNA MER1_type -31 2581 2354 235 295 16 0 chr2 142783677 142783738 -107904116 - MER5A DNA MER1_type 0 189 128 291 130 0 0 chr2 142784025 142784071 -107903783 - L1P5 LINE L1 -447 5704 5659 1986 123 10 10 chr2 142784081 142784383 -107903471 - AluSx SINE Alu -10 302 1 337 229 286 7 chr2 142784384 142784524 -107903330 - L2 LINE L2 -954 2360 2182 1228 232 154 60 chr2 142784524 142784898 -107902956 - L2 LINE L2 -1241 2073 1736 2026 113 14 14 chr2 142784898 142785191 -107902663 - AluSx SINE Alu -19 293 1 1228 232 154 60 chr2 142785191 142785528 -107902326 - L2 LINE L2 -1578 1736 1295 700 168 108 144 chr2 142785697 142786114 -107901740 + LTR7 LTR ERV1 49 450 0 1879 158 0 3 chr2 142788231 142788523 -107899331 - AluSp SINE Alu -22 291 1 22 42 0 0 chr2 142790409 142790433 -107897421 + AT_rich Low_complexity Low_complexity 1 24 0 710 154 47 35 chr2 142790443 142790612 -107897242 + AluSg SINE Alu 5 175 -135 1584 186 24 0 chr2 142791701 142791992 -107895862 - AluSx SINE Alu -14 298 1 186 43 0 0 chr2 142791992 142792015 -107895839 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 446 213 37 0 chr2 142792035 142792143 -107895711 - FRAM SINE Alu -54 122 11 651 162 17 0 chr2 142793897 142794014 -107893840 - MER41E LTR ERV1 -393 119 1 237 264 97 0 chr2 142795465 142795537 -107892317 + MIR SINE MIR 86 164 -98 357 367 0 0 chr2 142796018 142796116 -107891738 + L2 LINE L2 3154 3251 -21 189 175 0 0 chr2 142796129 142796169 -107891685 + (TA)n Simple_repeat Simple_repeat 1 40 0 407 356 0 12 chr2 142797153 142797313 -107890541 + MER5B DNA MER1_type 1 158 -20 346 252 162 26 chr2 142798901 142799167 -107888687 - L1ME4a LINE L1 -31 6090 5789 293 260 10 10 chr2 142799220 142799316 -107888538 - L1ME4a LINE L1 -315 5806 5711 247 164 269 0 chr2 142799331 142799398 -107888456 + L2 LINE L2 3225 3309 -4 342 284 54 64 chr2 142799570 142799690 -107888164 - L1ME4a LINE L1 -566 5555 5436 2095 121 0 3 chr2 142799690 142799987 -107887867 + AluSx SINE Alu 1 296 -16 342 284 54 64 chr2 142799987 142800070 -107887784 - L1ME4a LINE L1 -685 5436 5354 1501 239 124 6 chr2 142801075 142801623 -107886231 - MLT1E2 LTR MaLR -3 623 11 246 244 12 23 chr2 142802859 142802945 -107884909 + CT-rich Low_complexity Low_complexity 2 86 0 207 364 8 8 chr2 142803336 142803457 -107884397 + (TTG)n Simple_repeat Simple_repeat 2 122 0 405 0 0 0 chr2 142804317 142804362 -107883492 + (CA)n Simple_repeat Simple_repeat 2 46 0 951 262 38 31 chr2 142807450 142807740 -107880114 - AluJo SINE Alu -10 292 1 1997 113 11 3 chr2 142809287 142809570 -107878284 - AluSq SINE Alu -20 293 9 936 285 32 6 chr2 142810776 142811092 -107876762 - L1MB5 LINE L1 -13 6161 5838 1087 208 111 18 chr2 142811164 142811559 -107876295 - L1MB5 LINE L1 -495 5685 5254 225 154 0 0 chr2 142812395 142812434 -107875420 + A-rich Low_complexity Low_complexity 1 39 0 216 0 0 0 chr2 142813804 142813828 -107874026 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2937 172 20 41 chr2 142814604 142815342 -107872512 - pTR5 LTR ERV1 -974 1464 742 * 8777 152 17 4 chr2 142815341 142816943 -107870911 - HERVK22 LTR ERVK -2064 4773 3151 546 338 54 37 chr2 142817313 142817774 -107870080 - L1M3b LINE L1 -5771 510 42 1675 176 0 43 chr2 142817848 142818171 -107869683 + AluSc SINE Alu 1 309 0 1582 206 37 46 chr2 142818383 142818815 -107869039 - MSTB1 LTR MaLR -1 431 4 887 133 0 0 chr2 142819154 142819274 -107868580 + AluSq/x SINE Alu 1 120 -192 600 278 148 0 chr2 142819436 142819598 -107868256 - MER5A DNA MER1_type 0 189 4 744 215 129 0 chr2 142819616 142819802 -107868052 - MER63A DNA MER1_type 0 210 1 186 224 0 0 chr2 142819867 142819926 -107867928 + CT-rich Low_complexity Low_complexity 2 63 -5 2308 145 70 0 chr2 142819926 142820326 -107867528 + MSTC LTR MaLR 1 428 0 211 326 58 0 chr2 142820456 142820542 -107867312 + MIR SINE MIR 55 145 -63 3676 160 49 83 chr2 142820842 142822315 -107865539 + L1MB7 LINE L1 4663 6053 -131 242 283 92 67 chr2 142822332 142822452 -107865402 - L2 LINE L2 -1 3271 3149 1256 151 40 56 chr2 142822620 142822818 -107865036 - MLT1C LTR MaLR -31 342 187 342 0 0 0 chr2 142822818 142822856 -107864998 + (TG)n Simple_repeat Simple_repeat 2 39 0 1256 151 40 56 chr2 142822856 142823039 -107864815 - MLT1C LTR MaLR -186 187 3 493 306 44 11 chr2 142823930 142824113 -107863741 + MIR3 SINE MIR 5 193 -15 720 271 41 51 chr2 142824571 142824863 -107862991 + MER102b DNA MER1_type 2 290 -51 737 168 17 87 chr2 142825146 142825263 -107862591 + MER20 DNA MER1_type 1 104 -115 2088 152 40 12 chr2 142825263 142825591 -107862263 + MER1B DNA MER1_type 1 337 0 737 168 17 87 chr2 142825591 142825646 -107862208 + MER20 DNA MER1_type 104 161 -58 273 293 61 0 chr2 142825746 142825828 -107862026 + L1MC4a LINE L1 5820 5906 -1902 425 273 35 50 chr2 142825883 142826081 -107861773 + HAL1b LINE L1 1196 6119 -2 469 292 131 0 chr2 142827090 142827258 -107860596 - MIR SINE MIR -27 235 46 1736 117 0 0 chr2 142829038 142829268 -107858586 - AluSq SINE Alu -83 230 1 264 333 0 0 chr2 142829338 142829401 -107858453 - MIR SINE MIR -187 75 13 260 373 20 7 chr2 142829401 142829551 -107858303 - MARNA DNA Mariner -55 531 380 2139 17 4 0 chr2 142829615 142829849 -107858005 - L1PA3 LINE L1 -2 6153 5919 273 29 0 0 chr2 142831665 142831699 -107856155 + (GGAA)n Simple_repeat Simple_repeat 4 37 0 420 347 117 58 chr2 142833039 142833365 -107854489 - L2 LINE L2 -11 3261 2917 506 277 97 10 chr2 142833384 142833590 -107854264 - L2 LINE L2 -654 2660 2437 286 327 160 0 chr2 142835576 142835726 -107852128 - L2 LINE L2 -4 3309 3136 880 116 148 42 chr2 142836482 142836698 -107851156 + L1MA9 LINE L1 6074 6312 0 201 289 0 0 chr2 142837813 142837851 -107850003 - L2 LINE L2 -86 3186 3149 433 303 80 25 chr2 142838050 142838212 -107849642 - MIR3 SINE MIR -3 205 35 294 315 89 8 chr2 142839015 142839250 -107848604 + L2 LINE L2 1829 2082 -1232 5452 154 24 33 chr2 142839387 142840484 -107847370 - L1MA7 LINE L1 -5 6286 5206 268 367 34 7 chr2 142840498 142840645 -107847209 + L2 LINE L2 2274 2424 -890 274 347 162 6 chr2 142840811 142840984 -107846870 + MIR SINE MIR 53 252 -10 335 311 91 33 chr2 142842213 142842454 -107845400 + L3 LINE CR1 622 876 -701 251 302 88 22 chr2 142842620 142842938 -107844916 + L1M4 LINE L1 2110 2448 -3698 554 307 184 6 chr2 142842941 142843257 -107844597 + L3 LINE CR1 852 1223 -354 2844 196 92 75 chr2 142843566 142844107 -107843747 + L1MD2 LINE L1 5470 6000 -359 2521 49 3 10 chr2 142844107 142844412 -107843442 + AluY SINE Alu 1 303 -8 2844 196 92 75 chr2 142844412 142844514 -107843340 + L1MD2 LINE L1 6000 6099 -260 3261 174 57 18 chr2 142844514 142845186 -107842668 + L1MB7 LINE L1 5476 6173 -11 2844 196 92 75 chr2 142845186 142845209 -107842645 + L1MD2 LINE L1 6099 6120 -239 288 0 0 0 chr2 142845209 142845241 -107842613 + (CA)n Simple_repeat Simple_repeat 2 33 0 2844 196 92 75 chr2 142845241 142845412 -107842442 + L1MD2 LINE L1 6120 6323 -36 359 285 13 7 chr2 142845639 142845790 -107842064 + (TA)n Simple_repeat Simple_repeat 2 153 0 234 295 49 16 chr2 142846334 142846456 -107841398 + L1ME4a LINE L1 5992 6117 -4 258 292 115 23 chr2 142846474 142846604 -107841250 + L3 LINE CR1 1429 1570 -7 218 318 0 0 chr2 142846620 142846683 -107841171 + L2 LINE L2 3251 3313 0 2799 183 30 23 chr2 142846770 142847345 -107840509 + L1MB7 LINE L1 5590 6168 -16 702 315 100 13 chr2 142847827 142848138 -107839716 - MLT1I LTR MaLR 0 409 72 602 303 53 0 chr2 142848178 142848366 -107839488 + MIR SINE MIR 51 248 -14 233 336 138 9 chr2 142848371 142848487 -107839367 + L2 LINE L2 3183 3313 0 21 36 0 0 chr2 142849170 142849198 -107838656 + AT_rich Low_complexity Low_complexity 1 28 0 202 304 0 0 chr2 142849392 142849448 -107838406 + L3 LINE CR1 1333 1388 -189 228 304 0 0 chr2 142849977 142850033 -107837821 + (CA)n Simple_repeat Simple_repeat 1 56 0 2159 128 10 0 chr2 142850634 142850940 -107836914 + AluSx SINE Alu 1 309 -3 197 343 219 6 chr2 142851225 142851403 -107836451 + L3 LINE CR1 1222 1437 -140 464 292 35 42 chr2 142852152 142852403 -107835451 + MIR SINE MIR 3 248 -14 545 307 75 9 chr2 142852674 142852902 -107834952 - MLT1L LTR MaLR -4 611 369 516 289 18 12 chr2 142852933 142853099 -107834755 - MLT1L LTR MaLR -335 280 114 1861 218 54 54 chr2 142854267 142854877 -107832977 - L1ME3A LINE L1 0 6170 5561 2328 179 17 59 chr2 142855080 142855555 -107832299 + MLT2B2 LTR ERVL 1 455 -60 1171 139 143 17 chr2 142855561 142855798 -107832056 - MSTA LTR MaLR -146 282 16 327 96 77 0 chr2 142855823 142855875 -107831979 + MLT2B2 LTR ERVL 465 520 0 189 269 30 15 chr2 142856113 142856180 -107831674 + MIR SINE MIR 24 91 -171 1016 272 145 22 chr2 142856290 142856780 -107831074 + L2 LINE L2 2761 3311 -2 183 139 0 0 chr2 142856839 142856875 -107830979 + (CGGGGG)n Simple_repeat Simple_repeat 5 40 0 2003 158 71 8 chr2 142858087 142858441 -107829413 - MLT1B LTR MaLR 0 390 15 768 298 32 0 chr2 142859029 142859277 -107828577 + MER102a DNA MER1_type 75 330 0 1881 136 78 39 chr2 142859322 142859683 -107828171 + THE1C LTR MaLR 1 375 0 365 301 107 34 chr2 142860233 142860439 -107827415 + MIR SINE MIR 42 262 0 334 317 10 10 chr2 142860452 142860553 -107827301 - MIR SINE MIR -117 145 45 271 317 22 39 chr2 142861609 142861789 -107826065 - L1ME LINE L1 -239 5882 5706 601 299 100 0 chr2 142861796 142862047 -107825807 - L1ME LINE L1 -460 5661 5386 294 29 0 0 chr2 142862797 142862832 -107825022 + (CA)n Simple_repeat Simple_repeat 1 35 0 359 273 125 23 chr2 142863300 142863428 -107824426 + MIR SINE MIR 12 152 -110 303 247 173 0 chr2 142864871 142864952 -107822902 - L2 LINE L2 -9 3263 3169 590 311 62 0 chr2 142866203 142866428 -107821426 - MIR SINE MIR -15 247 9 1241 311 181 24 chr2 142866553 142867721 -107820133 - L2 LINE L2 -2 3311 1943 516 253 107 44 chr2 142867822 142868047 -107819807 - MIR SINE MIR -10 252 14 234 299 201 0 chr2 142869929 142870063 -107817791 - MER104 DNA Tc2 -13 167 7 1015 243 111 57 chr2 142871366 142871453 -107816401 - L1MC5 LINE L1 -54 7907 7826 1999 134 10 0 chr2 142871453 142871743 -107816111 - AluSx SINE Alu -16 296 4 1015 243 111 57 chr2 142871743 142872231 -107815623 - L1MC5 LINE L1 -135 7826 7301 278 327 10 0 chr2 142872205 142872306 -107815548 - L1MC4a LINE L1 -393 7415 7314 * 202 0 0 83 chr2 142873800 142873836 -107814018 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 265 174 22 0 chr2 142874574 142874620 -107813234 - L2 LINE L2 0 3313 3267 2839 196 43 31 chr2 142875134 142875806 -107812048 - L1MD2 LINE L1 -1 6358 5679 388 318 24 8 chr2 142876096 142876222 -107811632 - MER5A DNA MER1_type -6 183 56 1811 250 50 48 chr2 142876232 142876789 -107811065 + MLT1E LTR MaLR 36 593 0 303 231 51 51 chr2 142877300 142877327 -107810527 + L2 LINE L2 3161 3187 -126 423 0 0 0 chr2 142877327 142877374 -107810480 + (CA)n Simple_repeat Simple_repeat 2 48 0 303 231 51 51 chr2 142877374 142877463 -107810391 + L2 LINE L2 3186 3277 -36 392 121 0 44 chr2 142877469 142877560 -107810294 + (GGAA)n Simple_repeat Simple_repeat 2 88 0 300 135 77 0 chr2 142878863 142878915 -107808939 - MLT2B1 LTR ERVL 0 520 465 1243 211 101 67 chr2 142878955 142879419 -107808435 - MLT2B1 LTR ERVL -40 480 1 448 274 137 15 chr2 142879468 142879665 -107808189 - MIR SINE MIR -28 234 14 3610 162 36 3 chr2 142879983 142880569 -107807285 - MER6A DNA MER2_type 0 605 1 192 158 0 0 chr2 142880662 142880700 -107807154 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 397 290 184 25 chr2 142881893 142882138 -107805716 + L3 LINE CR1 1289 1572 -5 477 193 77 111 chr2 142882215 142882396 -107805458 + Charlie8 DNA MER1_type 2 176 -2241 411 317 42 8 chr2 142882625 142882745 -107805109 - MIR3 SINE MIR -84 124 1 5263 135 59 25 chr2 142882842 142884032 -107803822 + L1MA8 LINE L1 5052 6291 0 23 33 0 0 chr2 142884072 142884102 -107803752 + AT_rich Low_complexity Low_complexity 1 30 0 349 259 0 12 chr2 142884907 142884992 -107802862 + MLT1L LTR MaLR 3 86 -529 263 288 0 0 chr2 142885142 142885208 -107802646 + MLT1L LTR MaLR 135 200 -415 373 213 46 28 chr2 142885520 142885628 -107802226 + MLT1L LTR MaLR 496 605 -10 346 262 146 51 chr2 142885812 142886033 -107801821 + MIR SINE MIR 10 249 -13 375 274 159 62 chr2 142886231 142886457 -107801397 - MIR SINE MIR -12 250 3 207 200 27 13 chr2 142886589 142886664 -107801190 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 200 189 0 0 chr2 142886671 142886708 -107801146 + (TG)n Simple_repeat Simple_repeat 2 38 0 2617 176 49 14 chr2 142887164 142887670 -107800184 - MER67A LTR ERV1 -14 529 6 359 263 11 0 chr2 142887809 142887904 -107799950 + MER81 DNA DNA 16 111 -3 574 369 4 0 chr2 142888237 142888470 -107799384 + MIR SINE MIR 29 262 0 2389 83 0 0 chr2 142888478 142888767 -107799087 + AluSq SINE Alu 1 289 -24 644 213 94 35 chr2 142889519 142889721 -107798133 + MIR SINE MIR 33 246 -16 743 262 18 44 chr2 142889907 142890132 -107797722 - MIR SINE MIR -32 230 12 266 311 59 22 chr2 142890231 142890366 -107797488 - MIR3 SINE MIR -64 144 5 628 246 40 11 chr2 142890876 142891051 -107796803 + MIR SINE MIR 25 204 -58 296 259 9 0 chr2 142891069 142891177 -107796677 + (CATATA)n Simple_repeat Simple_repeat 6 114 0 2449 137 0 78 chr2 142891189 142891612 -107796242 + MLT1B LTR MaLR 1 390 0 3635 154 50 2 chr2 142891612 142892189 -107795665 - MER6A DNA MER2_type 0 605 1 276 149 0 21 chr2 142892202 142892249 -107795605 + Tigger5 DNA MER2_type 7 52 -2271 * 331 123 138 15 chr2 142892220 142892285 -107795569 + Tigger5 DNA MER2_type 2251 2323 0 444 235 12 0 chr2 142892332 142892417 -107795437 + Tigger5 DNA MER2_type 2237 2322 -1 218 175 0 0 chr2 142892419 142892459 -107795395 + (TG)n Simple_repeat Simple_repeat 2 41 0 2133 214 50 0 chr2 142893235 142893679 -107794175 + MLT2B1 LTR ERVL 1 466 -54 255 61 0 0 chr2 142893769 142893802 -107794052 + (TG)n Simple_repeat Simple_repeat 2 34 0 640 81 0 69 chr2 142893812 142893985 -107793869 + (TAGA)n Simple_repeat Simple_repeat 3 163 0 249 88 0 0 chr2 142893985 142894019 -107793835 + MLT2B1 LTR ERVL 428 461 -3 386 268 31 24 chr2 142894752 142894879 -107792975 + MIR3 SINE MIR 15 142 -66 580 246 66 6 chr2 142894955 142895122 -107792732 + MIR SINE MIR 85 261 -1 182 314 0 0 chr2 142895122 142895173 -107792681 + MIR3 SINE MIR 158 208 0 457 260 71 13 chr2 142895470 142895624 -107792230 - MIR SINE MIR -80 182 20 1659 192 3 19 chr2 142895737 142896054 -107791800 - AluJb SINE Alu 0 312 1 182 380 0 0 chr2 142896239 142896289 -107791565 + MIR SINE MIR 32 81 -181 559 124 48 9 chr2 142896448 142896553 -107791301 + L1MA8 LINE L1 6062 6170 -121 1413 152 7 39 chr2 142896859 142896946 -107790908 - MER45B DNA AcHobo -541 1040 952 2602 122 14 3 chr2 142896946 142897306 -107790548 + THE1B LTR MaLR 1 364 0 1413 152 7 39 chr2 142897306 142897499 -107790355 - MER45B DNA AcHobo -629 952 769 416 303 150 34 chr2 142899103 142899337 -107788517 + MER102b DNA MER1_type 64 324 -17 402 321 131 38 chr2 142899541 142899716 -107788138 - L2 LINE L2 -6 3307 3150 2522 190 116 6 chr2 142899716 142900216 -107787638 + MER89 LTR ERV1 1 555 -4 402 321 131 38 chr2 142900216 142900330 -107787524 - L2 LINE L2 -163 3150 2991 293 162 15 0 chr2 142900344 142900412 -107787442 + GA-rich Low_complexity Low_complexity 2 70 0 698 300 200 15 chr2 142900422 142900894 -107786960 - L2 LINE L2 -303 3010 2454 422 303 25 8 chr2 142901387 142901506 -107786348 + LTR16C LTR ERVL 188 308 -183 2084 102 0 4 chr2 142901647 142901922 -107785932 + AluSx SINE Alu 17 290 -22 2303 226 27 12 chr2 142901981 142902544 -107785310 + L1MC4 LINE L1 6771 7341 -701 1464 227 136 43 chr2 142903140 142903602 -107784252 + MLT1D LTR MaLR 1 505 0 2157 252 55 24 chr2 142904807 142905429 -107782425 + Tigger8 DNA MER2_type 1 641 -25 770 252 124 55 chr2 142905623 142906100 -107781754 + L1MC4a LINE L1 5679 6188 -1620 193 235 235 0 chr2 142906285 142906366 -107781488 + MIR SINE MIR 97 196 -66 369 245 141 31 chr2 142907322 142907514 -107780340 + L1ME4a LINE L1 5889 6101 -20 353 216 0 39 chr2 142907632 142907734 -107780120 + L1ME4a LINE L1 6013 6110 -11 385 326 27 14 chr2 142908841 142908988 -107778866 + MIR SINE MIR 10 158 -104 2411 53 0 23 chr2 142909143 142909446 -107778408 - AluY SINE Alu -15 296 1 1763 128 0 0 chr2 142909713 142909995 -107777859 + L1PA6 LINE L1 5898 6179 0 33 0 0 0 chr2 142910177 142910210 -107777644 + AT_rich Low_complexity Low_complexity 1 33 0 3548 100 2 0 chr2 142910522 142910993 -107776861 - L1PA8 LINE L1 -3 6169 5698 3362 72 2 8 chr2 142910995 142911528 -107776326 + L1PA8 LINE L1 5157 5687 -485 21 36 0 0 chr2 142911581 142911609 -107776245 + AT_rich Low_complexity Low_complexity 1 28 0 1358 205 18 11 chr2 142911900 142912178 -107775676 + L1MB4 LINE L1 5901 6180 0 224 264 35 35 chr2 142912420 142912507 -107775347 + L2 LINE L2 3005 3091 -181 621 297 105 9 chr2 142913253 142913472 -107774382 - MIR SINE MIR 0 262 23 949 274 77 40 chr2 142913535 142914013 -107773841 + L2 LINE L2 2434 2929 -385 2571 205 38 6 chr2 142914166 142914664 -107773190 - MLT2B2 LTR ERVL -1 514 1 1292 311 35 5 chr2 142914675 142915099 -107772755 + L1M2 LINE L1 11 447 -6402 367 312 118 32 chr2 142915127 142915313 -107772541 + L1M2 LINE L1 587 788 -6061 404 315 76 54 chr2 142915895 142916079 -107771775 + L1M2 LINE L1 598 785 -6064 4121 268 11 6 chr2 142916216 142917312 -107770542 + L1M2 LINE L1 1050 2151 -4698 2498 216 13 39 chr2 142917314 142918460 -107769394 + L1M2 LINE L1 2295 3411 -3437 3494 194 46 15 chr2 142918464 142918675 -107769179 + L1M2 LINE L1 4174 4377 -2471 297 0 0 0 chr2 142918675 142918708 -107769146 + (CA)n Simple_repeat Simple_repeat 2 34 0 3494 194 46 15 chr2 142918708 142919235 -107768619 + L1M2 LINE L1 4377 4935 -1913 348 161 5 72 chr2 142919310 142919503 -107768351 + (TA)n Simple_repeat Simple_repeat 1 180 0 2285 155 5 29 chr2 142919516 142919891 -107767963 + L1PB4 LINE L1 5782 6147 -9 240 289 121 104 chr2 142919915 142920088 -107767766 + L2 LINE L2 3135 3310 -3 188 338 154 44 chr2 142920094 142920387 -107767467 + L2 LINE L2 2947 3271 -1 37450 78 9 7 chr2 142921082 142926917 -107760937 - L1PA6 LINE L1 -2 6152 311 1617 148 180 3 chr2 142927891 142928202 -107759652 - MER47A DNA MER2_type 0 366 1 356 328 64 8 chr2 142928471 142928596 -107759258 - L2 LINE L2 -5 3267 3136 297 75 0 0 chr2 142928839 142928879 -107758975 + (TG)n Simple_repeat Simple_repeat 1 40 0 251 253 74 126 chr2 142929209 142929399 -107758455 - MIR SINE MIR -6 256 77 1913 141 40 9 chr2 142929569 142929895 -107757959 - L1MB3 LINE L1 -165 6018 5683 1321 179 68 119 chr2 142930423 142930808 -107757046 + MLT1A1 LTR MaLR 1 365 0 1380 189 62 14 chr2 142931137 142931428 -107756426 + AluJo SINE Alu 1 305 -7 23 0 0 0 chr2 142931465 142931488 -107756366 + AT_rich Low_complexity Low_complexity 1 23 0 731 154 0 51 chr2 142931620 142931776 -107756078 + L1PA16 LINE L1 6019 6166 0 277 303 136 22 chr2 142931841 142932069 -107755785 + HAL1b LINE L1 394 647 -701 229 269 114 80 chr2 142932710 142932851 -107755003 + HAL1 LINE L1 822 957 -1550 1241 177 142 8 chr2 142932851 142933111 -107754743 + AluJo SINE Alu 1 295 -7 229 269 114 80 chr2 142933111 142933444 -107754410 + HAL1 LINE L1 957 1312 -1195 2660 108 3 11 chr2 142933460 142933838 -107754016 + THE1C LTR MaLR 1 375 0 813 229 20 47 chr2 142933958 142934211 -107753643 + HAL1 LINE L1 1521 1766 -741 2475 172 34 0 chr2 142934951 142935363 -107752491 + MSTB LTR MaLR 1 426 0 8954 158 47 31 chr2 142935363 142935507 -107752347 + MSTB-int LTR MaLR 1 141 -1510 2016 140 0 0 chr2 142935507 142935793 -107752061 + AluSx SINE Alu 3 288 -24 8954 158 47 31 chr2 142935793 142937273 -107750581 + MSTB-int LTR MaLR 141 1651 0 2532 162 9 21 chr2 142937273 142937662 -107750192 + MSTB LTR MaLR 1 386 -40 1795 179 3 7 chr2 142937662 142937964 -107749890 - AluJo SINE Alu -11 301 1 2532 162 9 21 chr2 142937964 142938005 -107749849 + MSTB LTR MaLR 386 426 0 1705 199 6 13 chr2 142938787 142939099 -107748755 + AluJb SINE Alu 3 312 0 3925 224 163 26 chr2 142939986 142941169 -107746685 + L1MC4 LINE L1 6463 7807 -235 751 260 29 0 chr2 142941193 142941366 -107746488 - MER5A DNA MER1_type -11 178 1 246 280 50 40 chr2 142941366 142941466 -107746388 + L1MC4 LINE L1 7800 7900 -142 568 274 46 20 chr2 142941998 142942195 -107745659 + MIR SINE MIR 61 262 0 780 243 34 43 chr2 142942469 142942704 -107745150 + MIR SINE MIR 30 262 0 4472 100 11 63 chr2 142942713 142943442 -107744412 + LTR8 LTR ERV1 1 691 0 265 320 66 8 chr2 142943529 142943576 -107744278 + MLT1I LTR MaLR 93 136 -273 961 195 122 100 chr2 142943576 142944125 -107743729 - MER34B LTR ERV1 0 565 5 265 320 66 8 chr2 142944125 142944199 -107743655 + MLT1I LTR MaLR 136 221 -188 5272 155 24 10 chr2 142944200 142945082 -107742772 + MER4D LTR ERV1 1 894 -9 808 235 10 46 chr2 142945090 142945286 -107742568 + MLT1I LTR MaLR 218 406 -3 543 313 71 9 chr2 142946893 142947117 -107740737 - MIR SINE MIR -23 239 2 567 232 121 80 chr2 142948224 142948492 -107739362 + L1MC5 LINE L1 7423 7721 -240 1994 110 33 0 chr2 142948492 142948765 -107739089 + AluSx SINE Alu 19 300 -12 567 232 121 80 chr2 142948765 142948983 -107738871 + L1MC5 LINE L1 7721 7929 -32 198 0 0 0 chr2 142949007 142949029 -107738825 + (TG)n Simple_repeat Simple_repeat 2 23 0 231 246 14 29 chr2 142949048 142949117 -107738737 + MER5A DNA MER1_type 16 83 -106 192 336 106 35 chr2 142949539 142949573 -107738281 + L2 LINE L2 3148 3178 -94 2035 112 3 82 chr2 142949573 142949904 -107737950 + AluSq SINE Alu 1 305 -8 192 336 106 35 chr2 142949904 142949982 -107737872 + L2 LINE L2 3178 3268 -4 2362 101 0 3 chr2 142950059 142950366 -107737488 - AluSq SINE Alu -7 306 1 3388 138 25 4 chr2 142950390 142950903 -107736951 - MER1A DNA MER1_type -1 526 3 180 0 0 0 chr2 142951100 142951120 -107736734 + (A)n Simple_repeat Simple_repeat 1 20 0 305 174 47 58 chr2 142954452 142954538 -107733316 + L1MC5 LINE L1 7827 7911 -50 200 35 35 0 chr2 142955976 142956005 -107731849 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 1789 192 28 28 chr2 142956977 142957027 -107730827 - MLT1A1 LTR MaLR 0 365 316 2058 114 13 7 chr2 142957027 142957326 -107730528 + AluY SINE Alu 2 302 -9 1789 192 28 28 chr2 142957326 142957629 -107730225 - MLT1A1 LTR MaLR -48 317 12 1688 85 5 0 chr2 142958347 142958559 -107729295 + AluSg/x SINE Alu 66 278 -32 225 0 0 0 chr2 142958559 142958584 -107729270 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 186 167 0 0 chr2 142958729 142958765 -107729089 + CT-rich Low_complexity Low_complexity 1 36 0 2216 119 13 0 chr2 142959252 142959554 -107728300 + AluSq SINE Alu 1 306 -7 340 211 0 14 chr2 142959718 142959789 -107728065 + MLT1J2 LTR MaLR 60 129 -321 374 242 100 0 chr2 142959926 142960046 -107727808 + MLT1L LTR MaLR 475 606 -9 194 103 0 26 chr2 142960070 142960109 -107727745 + (CA)n Simple_repeat Simple_repeat 1 38 0 315 242 174 0 chr2 142960117 142960249 -107727605 + L1ME4a LINE L1 5966 6120 -1 2110 116 0 0 chr2 142960442 142960736 -107727118 + AluSc SINE Alu 1 294 -15 186 283 81 40 chr2 142960849 142961022 -107726832 - L2 LINE L2 -838 2476 2297 261 338 52 19 chr2 142961506 142961660 -107726194 - L2 LINE L2 -557 2757 2599 415 169 14 0 chr2 142961832 142961903 -107725951 + LTR16B LTR ERVL 393 464 0 270 267 0 0 chr2 142962780 142962870 -107724984 + L1MC4 LINE L1 6614 6703 -1339 * 294 256 0 0 chr2 142962790 142962880 -107724974 - L1MC4 LINE L1 -1339 6703 6614 312 284 23 0 chr2 142962888 142962976 -107724878 + L1MC4 LINE L1 6614 6703 -1339 21 36 0 0 chr2 142962989 142963017 -107724837 + AT_rich Low_complexity Low_complexity 1 28 0 2538 117 21 5 chr2 142963312 142963696 -107724158 + MLT1B LTR MaLR 1 390 0 313 290 10 10 chr2 142963726 142963826 -107724028 + L2 LINE L2 3187 3286 -27 1104 219 22 5 chr2 142963826 142964050 -107723804 + MLT2D LTR ERVL 1 228 -325 195 42 0 0 chr2 142964051 142964075 -107723779 + (TC)n Simple_repeat Simple_repeat 2 25 0 1535 177 0 81 chr2 142964110 142964420 -107723434 + MLT2B3 LTR ERVL 235 519 -35 351 116 52 44 chr2 142964429 142964682 -107723172 + (TA)n Simple_repeat Simple_repeat 1 255 0 6485 185 21 65 chr2 142964797 142967279 -107720575 + L1MC1 LINE L1 4044 6333 0 2287 85 3 7 chr2 142967676 142967969 -107719885 + AluSx SINE Alu 1 292 -20 180 255 21 0 chr2 142967995 142968042 -107719812 + MIR SINE MIR 98 145 -63 376 198 44 126 chr2 142968181 142968363 -107719491 + L1ME4a LINE L1 5953 6119 -2 245 224 15 30 chr2 142968991 142969058 -107718796 + L2 LINE L2 3204 3269 -3 622 266 6 0 chr2 142969569 142969727 -107718127 - MER5B DNA MER1_type 0 178 20 432 270 104 30 chr2 142970819 142971049 -107716805 - MER102b DNA MER1_type -8 333 87 223 319 81 6 chr2 142971379 142971539 -107716315 - MIR SINE MIR -71 191 20 210 130 0 43 chr2 142971918 142971964 -107715890 + (CAAAAA)n Simple_repeat Simple_repeat 1 44 0 2195 88 0 50 chr2 142972543 142972860 -107714994 - AluSq SINE Alu -12 301 1 281 245 45 158 chr2 142972866 142972992 -107714862 + MER5B DNA MER1_type 7 146 -43 1826 132 94 0 chr2 142972992 142973332 -107714522 - L1MB2 LINE L1 0 6171 5800 2824 145 82 4 chr2 142972995 142973520 -107714334 - L1MB2 LINE L1 -3 6168 5603 281 245 45 158 chr2 142973332 142973562 -107714292 + MER5B DNA MER1_type 146 168 -21 318 311 22 7 chr2 142973799 142973934 -107713920 - MIR SINE MIR -83 179 43 276 276 31 87 chr2 142973977 142974149 -107713705 - L2 LINE L2 -354 2960 2805 1918 128 14 7 chr2 142974149 142974438 -107713416 + AluSg SINE Alu 4 294 -16 276 276 31 87 chr2 142974438 142974519 -107713335 - L2 LINE L2 -509 2805 2721 259 233 55 14 chr2 142975670 142975743 -107712111 + LTR67 LTR ERVL 482 557 0 430 298 27 74 chr2 142975815 142976073 -107711781 - MLT1J LTR MaLR -40 471 226 946 125 65 0 chr2 142976199 142976367 -107711487 + L1MA8 LINE L1 6112 6290 -1 26 64 0 0 chr2 142976367 142976414 -107711440 + AT_rich Low_complexity Low_complexity 1 47 0 1335 155 111 143 chr2 142977144 142977558 -107710296 + LTR40b LTR ERVL 60 460 -2 356 304 26 0 chr2 142978466 142978581 -107709273 - MIR3 SINE MIR -10 198 81 645 243 117 54 chr2 142978590 142978766 -107709088 + L2 LINE L2 2870 3033 -280 1908 114 50 11 chr2 142978766 142979047 -107708807 - AluSx SINE Alu -20 292 1 645 243 117 54 chr2 142979047 142979203 -107708651 + L2 LINE L2 3033 3223 -90 491 237 79 7 chr2 142979284 142979423 -107708431 - MER102b DNA MER1_type -1 340 192 2316 75 0 0 chr2 142979459 142979772 -107708082 + AluY SINE Alu 1 313 0 267 193 0 0 chr2 142980379 142980436 -107707418 - L1MA8 LINE L1 -5 6286 6230 445 309 101 56 chr2 142980779 142981206 -107706648 + Charlie2 DNA MER1_type 31 476 -2306 2767 229 123 45 chr2 142981411 142982581 -107705273 + Charlie2a DNA MER1_type 1485 2745 -117 702 223 65 46 chr2 142982583 142982843 -107705011 + L1MC4 LINE L1 7763 8027 -15 330 234 78 16 chr2 142982866 142982994 -107704860 + Charlie2a DNA MER1_type 2727 2862 0 586 291 36 42 chr2 142983013 142983322 -107704532 + MER113 DNA MER1_type? 4 310 -211 532 203 14 56 chr2 142983602 142983745 -107704109 - MIR SINE MIR -104 158 22 256 300 143 36 chr2 142983847 142983987 -107703867 + MIR3 SINE MIR 6 160 -48 309 211 84 89 chr2 142983988 142984178 -107703676 - Charlie7 DNA MER1_type -1 2611 2423 611 201 32 32 chr2 142984179 142984333 -107703521 - Charlie7 DNA MER1_type -1895 717 564 1073 217 70 0 chr2 142984768 142985012 -107702842 + MIR SINE MIR 2 262 0 201 156 0 0 chr2 142985015 142985047 -107702807 + (ATG)n Simple_repeat Simple_repeat 2 33 0 363 326 39 3 chr2 142985129 142985324 -107702530 + MIR SINE MIR 11 261 -1 184 277 0 21 chr2 142985789 142985836 -107702018 + MIR3 SINE MIR 160 205 -3 281 230 167 16 chr2 142985985 142986111 -107701743 - MER5A DNA MER1_type -13 176 32 357 303 55 9 chr2 142986141 142986250 -107701604 - MER5B DNA MER1_type -64 114 1 1623 146 13 53 chr2 142986304 142986606 -107701248 + AluJb SINE Alu 5 294 -18 2955 154 25 2 chr2 142986611 142987086 -107700768 + L1MB2 LINE L1 5679 6164 -7 239 266 92 43 chr2 142988988 142989172 -107698682 - MIR3 SINE MIR -6 202 10 230 308 57 88 chr2 142989363 142989522 -107698332 - L2 LINE L2 -107 3165 3012 584 205 79 0 chr2 142989706 142989833 -107698021 + L1MB7 LINE L1 6048 6184 0 189 0 0 0 chr2 142989928 142989949 -107697905 + (A)n Simple_repeat Simple_repeat 1 21 0 24 77 0 0 chr2 142990005 142990057 -107697797 + AT_rich Low_complexity Low_complexity 1 52 0 204 291 209 64 chr2 142991568 142991974 -107695880 - L2 LINE L2 -1 3271 2807 441 297 82 28 chr2 142992746 142992928 -107694926 + MIR SINE MIR 69 260 -2 610 272 35 12 chr2 142992970 142993143 -107694711 + MIR SINE MIR 8 184 -78 285 264 128 0 chr2 142993279 142993427 -107694427 + L1M4 LINE L1 4779 4945 -1201 605 266 113 43 chr2 142994651 142995163 -107692691 - L1ME4a LINE L1 -40 6081 5534 2507 222 92 44 chr2 142995466 142996091 -107691763 - MER21B LTR ERV1 -124 739 76 1479 134 169 11 chr2 142996091 142996352 -107691502 + AluSx SINE Alu 1 302 -10 2507 222 92 44 chr2 142996352 142996424 -107691430 - MER21B LTR ERV1 -787 76 9 2153 138 0 0 chr2 142996514 142996826 -107691028 + AluSx SINE Alu 1 312 0 4548 46 0 0 chr2 142996833 142997352 -107690502 + L1PA4 LINE L1 5637 6155 0 360 275 108 76 chr2 142997375 142997626 -107690228 + MLT1K LTR MaLR 164 422 -166 985 211 16 11 chr2 142998656 142998841 -107689013 - MER5A DNA MER1_type 0 189 4 330 234 339 8 chr2 142998853 142998977 -107688877 + MER5B DNA MER1_type 3 167 -11 1967 177 0 0 chr2 142998996 142999307 -107688547 + AluSq SINE Alu 1 311 -2 993 140 18 0 chr2 142999317 142999481 -107688373 + L1MB8 LINE L1 4866 5032 -1114 2155 119 37 48 chr2 142999514 142999891 -107687963 + L1MB8 LINE L1 5800 6172 -6 228 316 51 0 chr2 143000093 143000172 -107687682 - MIR SINE MIR -119 143 61 520 184 16 0 chr2 143000586 143000687 -107687167 - MER5A DNA MER1_type -83 106 4 623 218 113 0 chr2 143000903 143001045 -107686809 + MER5A DNA MER1_type 31 188 -1 186 293 24 0 chr2 143001625 143001666 -107686188 + L2 LINE L2 3234 3275 -38 339 304 35 9 chr2 143001729 143001844 -107686010 - MIR SINE MIR -55 153 36 24 0 0 0 chr2 143001953 143001977 -107685877 + AT_rich Low_complexity Low_complexity 1 24 0 3412 110 16 48 chr2 143002726 143003360 -107684494 + MER4B LTR ERV1 1 779 0 273 244 134 37 chr2 143003489 143003571 -107684283 - L2 LINE L2 -20 3293 3204 183 250 83 17 chr2 143006885 143006945 -107680909 + L2 LINE L2 3195 3258 -14 1895 90 33 63 chr2 143009429 143009590 -107678264 - AluSx SINE Alu -21 291 127 206 32 32 0 chr2 143009590 143009621 -107678233 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1939 121 3 14 chr2 143009621 143009903 -107677951 - AluSg SINE Alu -31 279 1 1895 90 33 63 chr2 143009903 143010040 -107677814 - AluSx SINE Alu -183 129 1 465 239 204 10 chr2 143010051 143010252 -107677602 - L1MC4a LINE L1 -1860 5948 5709 483 296 81 6 chr2 143010373 143010545 -107677309 - MIR3 SINE MIR -23 185 1 556 218 68 27 chr2 143010878 143011025 -107676829 - MER34B LTR ERV1 -408 157 5 1328 159 64 24 chr2 143011513 143011809 -107676045 - LTR37A LTR ERV1 -2 424 117 9340 87 11 8 chr2 143011915 143013241 -107674613 - L1P LINE L1 -948 5198 3868 13395 90 10 13 chr2 143013377 143015311 -107672543 + L1P LINE L1 2514 4441 -1705 1105 72 59 0 chr2 143016072 143016225 -107671629 - Charlie3 DNA MER1_type -5 2705 2544 2082 140 0 16 chr2 143016227 143016542 -107671312 + AluSx SINE Alu 1 310 -2 349 220 154 33 chr2 143016542 143016859 -107670995 + MLT1L LTR MaLR 208 615 0 496 298 28 7 chr2 143017166 143017430 -107670424 + L1ME LINE L1 5257 5536 -642 2344 22 0 33 chr2 143017533 143017804 -107670050 + SVA Other Other 1125 1386 0 195 42 0 0 chr2 143018224 143018248 -107669606 + (T)n Simple_repeat Simple_repeat 1 24 0 187 254 109 18 chr2 143018552 143018607 -107669247 + L2 LINE L2 3023 3082 -190 1419 89 0 0 chr2 143018890 143019069 -107668785 - AluY SINE Alu -15 296 118 817 155 63 0 chr2 143019608 143019750 -107668104 + AluJb SINE Alu 147 297 -15 21 0 0 0 chr2 143020862 143020883 -107666971 + AT_rich Low_complexity Low_complexity 1 21 0 570 259 7 0 chr2 143020883 143021018 -107666836 - L1PB4 LINE L1 -2 6154 6019 346 222 198 32 chr2 143021284 143021410 -107666444 + MER5A DNA MER1_type 43 189 0 1920 97 111 7 chr2 143021412 143021691 -107666163 + AluSg1 SINE Alu 1 308 -1 577 274 225 26 chr2 143022929 143023603 -107664251 - L2 LINE L2 0 3313 2496 2353 79 0 3 chr2 143023843 143024135 -107663719 - AluSg SINE Alu -19 291 1 2695 16 0 23 chr2 143025587 143025895 -107661959 + AluYa5 SINE Alu 1 301 -10 1638 187 0 7 chr2 143028319 143028602 -107659252 - AluJb SINE Alu -21 291 11 22 0 0 0 chr2 143029205 143029227 -107658627 + AT_rich Low_complexity Low_complexity 1 22 0 2369 84 0 0 chr2 143029423 143029710 -107658144 - AluSx SINE Alu -25 287 1 1333 120 50 133 chr2 143029819 143030202 -107657652 - L1PA16 LINE L1 0 6166 5816 6855 31 1 2 chr2 143030390 143031545 -107656309 + L1HS LINE L1 4890 6044 -111 2342 241 78 87 chr2 143031927 143032846 -107655008 - L1ME3A LINE L1 0 6170 5259 201 238 75 12 chr2 143033042 143033122 -107654732 - L2 LINE L2 0 3313 3229 244 327 42 36 chr2 143033234 143033399 -107654455 - L2 LINE L2 -203 3069 2904 257 322 150 51 chr2 143033600 143033873 -107653981 - L2 LINE L2 -595 2719 2420 9852 86 25 1 chr2 143034253 143035671 -107652183 + L1PA6 LINE L1 1573 3023 -3123 7145 61 9 5 chr2 143035773 143036806 -107651048 + L1PA6 LINE L1 5101 6139 -15 449 303 37 12 chr2 143037507 143037669 -107650185 - MIR SINE MIR -48 214 49 926 136 0 7 chr2 143038297 143038437 -107649417 - AluSq/x SINE Alu -173 139 1 2434 158 42 7 chr2 143038437 143039010 -107648844 - L1MB5 LINE L1 -32 6142 5433 237 154 0 0 chr2 143040802 143040841 -107647013 - MER117 DNA MER1_type -53 144 106 684 270 64 34 chr2 143040864 143041274 -107646580 - MLT1L LTR MaLR 0 615 167 218 200 200 0 chr2 143042496 143042556 -107645298 + L2 LINE L2 3230 3301 -12 1011 125 7 0 chr2 143042562 143042706 -107645148 - AluSc SINE Alu -22 287 143 2180 89 4 4 chr2 143042715 143043021 -107644833 - AluSp SINE Alu 0 307 2 567 101 0 0 chr2 143043686 143043755 -107644099 + AluJ/FLAM SINE Alu 2 70 -242 1941 150 0 0 chr2 143043926 143044219 -107643635 + AluSx SINE Alu 1 293 -19 474 247 68 63 chr2 143046021 143046211 -107641643 - MER117 DNA MER1_type 0 197 7 1170 196 42 0 chr2 143046352 143046612 -107641242 - L1MB7 LINE L1 -4 6180 5910 502 176 109 42 chr2 143046619 143046738 -107641116 + ORSL DNA AcHobo 149 275 0 189 74 0 0 chr2 143047738 143047765 -107640089 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 214 315 146 0 chr2 143047787 143047876 -107639978 - L2 LINE L2 -37 3276 3175 1527 164 42 55 chr2 143047975 143048282 -107639572 - MLT1B LTR MaLR 0 390 88 720 232 24 6 chr2 143048282 143048446 -107639408 - MLT1A1 LTR MaLR 0 365 199 359 164 0 136 chr2 143048476 143048616 -107639238 - MSTC LTR MaLR -176 189 69 488 207 12 23 chr2 143048631 143048749 -107639105 - MSTC LTR MaLR -249 116 1 29 28 0 0 chr2 143049146 143049182 -107638672 + AT_rich Low_complexity Low_complexity 1 36 0 228 314 0 29 chr2 143051163 143051233 -107636621 + L2 LINE L2 3195 3262 -10 205 260 68 27 chr2 143051238 143051311 -107636543 - MIR SINE MIR -109 153 78 416 283 124 0 chr2 143052176 143052289 -107635565 + L2 LINE L2 3137 3263 -9 288 254 53 35 chr2 143052696 143052810 -107635044 - MIR SINE MIR -69 193 78 402 260 122 28 chr2 143052866 143053047 -107634807 - MIR SINE MIR -18 244 47 2226 130 0 7 chr2 143053711 143054019 -107633835 + AluSp SINE Alu 1 306 -7 1982 128 7 7 chr2 143054139 143054427 -107633427 + AluJb SINE Alu 1 288 -24 439 239 0 0 chr2 143055208 143055300 -107632554 + MER5A DNA MER1_type 5 96 -93 982 157 99 0 chr2 143055478 143055650 -107632204 - MER5A DNA MER1_type 0 189 1 1472 188 20 33 chr2 143057366 143057669 -107630185 + AluJo SINE Alu 1 299 -13 180 365 10 0 chr2 143057839 143057935 -107629919 + L3b LINE CR1 1155 1251 -332 1012 265 204 32 chr2 143058284 143058842 -107629012 - MLT2F LTR ERVL 0 663 10 252 143 0 0 chr2 143059287 143059329 -107628525 + (TCTCC)n Simple_repeat Simple_repeat 5 46 0 711 204 19 12 chr2 143059621 143059783 -107628071 - L1MA10 LINE L1 -2 6332 6170 3204 185 41 20 chr2 143059791 143060675 -107627179 - L1ME1 LINE L1 -165 6001 5112 190 349 96 0 chr2 143060714 143060797 -107627057 + L2 LINE L2 3155 3245 -27 2187 114 3 0 chr2 143061258 143061556 -107626298 + AluSq SINE Alu 1 299 -14 942 261 131 57 chr2 143061825 143062391 -107625463 + L1MEd LINE L1 3 610 -5509 396 236 27 0 chr2 143062433 143062543 -107625311 + L1MEd LINE L1 690 802 -5317 634 259 99 88 chr2 143062731 143063919 -107623935 + L1M4 LINE L1 2749 3949 -2197 10929 193 74 18 chr2 143063933 143067549 -107620305 - L1MB7 LINE L1 -10 6485 2678 364 213 13 13 chr2 143067546 143067621 -107620233 - L1MB7 LINE L1 -6205 76 2 * 334 330 73 34 chr2 143067632 143067657 -107620197 + L1M4 LINE L1 3951 3974 -2172 2156 76 40 0 chr2 143067657 143067932 -107619922 + AluY SINE Alu 17 302 -9 334 330 73 34 chr2 143067932 143067975 -107619879 + L1M4 LINE L1 3974 4014 -2132 2015 136 0 24 chr2 143067975 143068269 -107619585 + AluSg SINE Alu 1 287 -23 334 330 73 34 chr2 143068269 143068432 -107619422 + L1M4 LINE L1 4014 4192 -1954 251 286 133 10 chr2 143068471 143068674 -107619180 + L1M4 LINE L1 4233 4460 -1686 241 336 16 8 chr2 143068731 143068853 -107619001 - MLT1J LTR MaLR -2 509 387 305 242 91 8 chr2 143068937 143069069 -107618785 + L1M4 LINE L1 4601 4743 -1403 4211 170 67 10 chr2 143069069 143069886 -107617968 + L1MB7 LINE L1 5321 6184 0 338 335 30 0 chr2 143069875 143070039 -107617815 + L1M4 LINE L1 4728 4896 -1250 * 635 196 0 0 chr2 143070102 143070214 -107617640 - FRAM SINE Alu -10 166 55 411 303 58 19 chr2 143071379 143071534 -107616320 - MER5B DNA MER1_type 0 178 18 2217 106 0 0 chr2 143071541 143071824 -107616030 - AluSx SINE Alu -29 283 1 321 256 229 12 chr2 143071861 143072038 -107615816 + MIR SINE MIR 24 230 -32 1838 202 75 59 chr2 143072341 143072835 -107615019 + MLT1D LTR MaLR 2 503 -2 226 302 78 70 chr2 143073344 143073473 -107614381 + L2 LINE L2 3143 3272 0 1167 167 5 9 chr2 143273868 143274078 -107413776 - MER47A DNA MER2_type -115 251 43 1145 156 22 74 chr2 143274077 143274176 -107413678 - MER54A LTR ERVL -677 224 121 * 2290 90 10 0 chr2 143274176 143274476 -107413378 + AluSp SINE Alu 1 303 -10 1145 156 22 74 chr2 143274476 143274607 -107413247 - MER54A LTR ERVL -780 121 6 403 156 0 0 chr2 143275732 143275796 -107412058 + FRAM SINE Alu 69 132 -34 2072 125 16 0 chr2 143275848 143276152 -107411702 - AluSq SINE Alu -4 309 1 252 0 0 0 chr2 143276160 143276188 -107411666 + (A)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr2 143276199 143276220 -107411634 + AT_rich Low_complexity Low_complexity 1 21 0 210 37 0 0 chr2 143276418 143276445 -107411409 + (CA)n Simple_repeat Simple_repeat 1 27 0 2136 128 0 10 chr2 143276998 143277311 -107410543 - AluSg SINE Alu 0 310 1 392 354 88 0 chr2 143277772 143277964 -107409890 - L3 LINE CR1 -3 1574 1366 214 393 37 9 chr2 143277977 143278084 -107409770 - L2 LINE L2 0 3272 3163 807 171 0 20 chr2 143278467 143278613 -107409241 + FLAM_C SINE Alu 1 143 0 844 253 0 0 chr2 143278653 143278839 -107409015 - AluJo SINE Alu -12 300 115 25612 141 14 25 chr2 143278839 143284036 -107403818 - L1PA8A LINE L1 -5 6441 1187 216 67 0 0 chr2 143284036 143284066 -107403788 + (TTG)n Simple_repeat Simple_repeat 1 30 0 25612 141 14 25 chr2 143284066 143285264 -107402590 - L1PA8A LINE L1 -5259 1187 57 234 0 0 0 chr2 143285264 143285290 -107402564 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 25612 141 14 25 chr2 143285290 143285346 -107402508 - L1PA8A LINE L1 -6389 57 2 676 195 8 8 chr2 143285353 143285476 -107402378 - AluJo SINE Alu -189 123 1 2021 116 0 47 chr2 143286359 143286660 -107401194 + AluSx SINE Alu 1 287 -25 182 219 21 125 chr2 143286964 143287060 -107400794 - L3b LINE CR1 -199 1384 1299 896 169 0 30 chr2 143288545 143288711 -107399143 - FRAM SINE Alu -2 164 4 215 256 0 0 chr2 143288765 143288808 -107399046 - MIR SINE MIR -114 148 106 22 56 0 0 chr2 143288973 143289009 -107398845 + AT_rich Low_complexity Low_complexity 1 36 0 242 257 285 17 chr2 143289363 143289542 -107398312 + MIR SINE MIR 32 258 -4 211 185 19 19 chr2 143290478 143290532 -107397322 + (TTA)n Simple_repeat Simple_repeat 1 54 0 33 25 0 0 chr2 143291704 143291744 -107396110 + AT_rich Low_complexity Low_complexity 1 40 0 2102 163 44 31 chr2 143292490 143293035 -107394819 - MLT2A2 LTR ERVL 0 554 1 719 200 21 1 chr2 143293282 143293422 -107394432 - LTR12 LTR ERV1 -234 480 175 310 221 0 0 chr2 143293422 143293490 -107394364 - LTR30 LTR ERV1 -102 620 553 368 105 79 13 chr2 143293491 143293567 -107394287 - LTR12 LTR ERV1 -429 285 205 1210 116 49 107 chr2 143293605 143293884 -107393970 - LTR12 LTR ERV1 -455 1983 1 214 369 39 0 chr2 143294437 143294540 -107393314 + L2 LINE L2 2240 2346 -968 633 261 0 25 chr2 143294662 143294823 -107393031 + L2 LINE L2 2565 2721 -593 491 159 46 24 chr2 143294824 143294946 -107392908 + MER61E LTR ERV1 1 107 -318 478 246 122 42 chr2 143295140 143295464 -107392390 + MER61D LTR ERV1 335 490 -11 814 280 109 58 chr2 143295572 143295603 -107392251 + L2 LINE L2 2730 2758 -555 212 0 36 0 chr2 143295603 143295631 -107392223 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 814 280 109 58 chr2 143295631 143296123 -107391731 + L2 LINE L2 2758 3313 0 425 243 7 125 chr2 143296811 143296963 -107390891 - MER94 DNA DNA 0 134 1 895 237 38 15 chr2 143297718 143297984 -107389870 - HsTC2 DNA Tc2 0 1900 1629 238 218 18 0 chr2 143297976 143298031 -107389823 - HsTC2 DNA Tc2 -1813 85 30 * 758 21 21 0 chr2 143299027 143299122 -107388732 + (TTTC)n Simple_repeat Simple_repeat 3 99 0 1672 169 30 44 chr2 143300229 143300636 -107387218 + L1MB8 LINE L1 5762 6162 -16 21 0 0 0 chr2 143302702 143302723 -107385131 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 143302781 143302802 -107385052 + AT_rich Low_complexity Low_complexity 1 21 0 843 207 18 55 chr2 143303355 143303572 -107384282 - MER58C DNA MER1_type 0 215 7 401 251 137 46 chr2 143303790 143303965 -107383889 - MLT1J LTR MaLR -2 509 319 245 226 0 16 chr2 143304163 143304225 -107383629 - MLT1L LTR MaLR -536 79 19 363 306 50 0 chr2 143304318 143304439 -107383415 + MIR SINE MIR 43 169 -93 243 0 0 0 chr2 143306738 143306765 -107381089 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 992 195 0 0 chr2 143307130 143307299 -107380555 + MLT1B LTR MaLR 219 387 -3 777 242 0 6 chr2 143307748 143307913 -107379941 + AluJo SINE Alu 124 287 -25 310 280 11 0 chr2 143308534 143308627 -107379227 - MIR SINE MIR -1 261 168 401 325 139 0 chr2 143308630 143308796 -107379058 + MER91B DNA MER1_type 1 189 -1 243 230 0 95 chr2 143309068 143309142 -107378712 - L2 LINE L2 -3 3310 3244 243 61 0 0 chr2 143309380 143309413 -107378441 + (CA)n Simple_repeat Simple_repeat 1 33 0 1486 255 76 21 chr2 143309469 143310063 -107377791 - MLT1E2 LTR MaLR -8 618 1 2274 139 8 5 chr2 143310065 143310453 -107377401 - MLT1B LTR MaLR -1 389 1 2259 101 0 3 chr2 143310482 143310789 -107377065 - AluSc SINE Alu -3 306 1 608 243 179 84 chr2 143310881 143311379 -107376475 - L1MC4 LINE L1 0 8042 7498 402 39 0 0 chr2 143312016 143312068 -107375786 + (TA)n Simple_repeat Simple_repeat 2 53 0 387 0 0 0 chr2 143313314 143313357 -107374497 + (TA)n Simple_repeat Simple_repeat 2 44 0 22 70 0 0 chr2 143318125 143318168 -107369686 + AT_rich Low_complexity Low_complexity 1 43 0 30 0 0 0 chr2 143318843 143318873 -107368981 + AT_rich Low_complexity Low_complexity 1 30 0 5064 37 8 10 chr2 143320057 143320680 -107367174 + L1PA4 LINE L1 5531 6152 -3 2578 242 40 1 chr2 143321475 143322131 -107365723 - L1ME1 LINE L1 -4 6162 5482 1948 284 3 16 chr2 143322127 143322767 -107365087 + L1M4 LINE L1 3707 4338 -1808 * 25 31 0 0 chr2 143325464 143325496 -107362358 + AT_rich Low_complexity Low_complexity 1 32 0 212 308 0 0 chr2 143326095 143326147 -107361707 + L2 LINE L2 3254 3305 -8 217 222 19 19 chr2 143326349 143326403 -107361451 + L2 LINE L2 3256 3309 -4 183 80 0 0 chr2 143326681 143326706 -107361148 + (A)n Simple_repeat Simple_repeat 1 25 0 215 213 0 0 chr2 143327332 143327379 -107360475 + (CAT)n Simple_repeat Simple_repeat 3 49 0 28 0 0 0 chr2 143327550 143327578 -107360276 + AT_rich Low_complexity Low_complexity 1 28 0 723 234 46 0 chr2 143328553 143328750 -107359104 - MER63A DNA MER1_type -4 206 1 29 28 0 0 chr2 143329061 143329097 -107358757 + AT_rich Low_complexity Low_complexity 1 36 0 498 323 67 14 chr2 143329345 143329568 -107358286 + MIR SINE MIR 2 236 -26 1389 112 20 0 chr2 143329598 143329795 -107358059 + AluSq SINE Alu 101 301 -12 198 292 177 0 chr2 143329953 143330049 -107357805 - MIR3 SINE MIR -3 205 93 283 294 64 9 chr2 143330077 143330186 -107357668 + MIR SINE MIR 86 200 -62 2222 97 3 0 chr2 143331500 143331798 -107356056 + AluSx SINE Alu 1 299 -13 192 261 101 77 chr2 143332495 143332589 -107355265 - MIR SINE MIR -89 119 19 2376 75 3 13 chr2 143333070 143333378 -107354476 + AluY SINE Alu 1 305 -6 1368 209 68 3 chr2 143333681 143334049 -107353805 - LTR37A LTR ERV1 0 426 35 2003 186 70 8 chr2 143334630 143335028 -107352826 + MSTB LTR MaLR 4 426 0 198 0 0 0 chr2 143335458 143335480 -107352374 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 23 68 0 0 chr2 143335895 143335939 -107351915 + AT_rich Low_complexity Low_complexity 1 44 0 810 209 22 16 chr2 143336603 143336785 -107351069 - MER5A DNA MER1_type 0 189 7 1542 203 10 68 chr2 143336910 143337109 -107350745 - MLT1A1 LTR MaLR -2 363 195 1904 117 44 0 chr2 143337109 143337407 -107350447 + AluSq SINE Alu 1 311 -2 1542 203 10 68 chr2 143337407 143337592 -107350262 - MLT1A1 LTR MaLR -170 195 1 358 333 8 8 chr2 143339261 143339387 -107348467 + MIR3 SINE MIR 67 192 -16 448 264 15 81 chr2 143340059 143340256 -107347598 + MIR SINE MIR 8 191 -71 231 157 0 0 chr2 143340257 143340308 -107347546 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 537 248 135 8 chr2 143343271 143343404 -107344450 - MER5A DNA MER1_type -7 182 33 207 0 0 0 chr2 143344099 143344122 -107343732 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 21 0 0 0 chr2 143344269 143344290 -107343564 + AT_rich Low_complexity Low_complexity 1 21 0 1234 202 61 76 chr2 143344485 143344734 -107343120 - MLT1B LTR MaLR 0 390 148 2313 62 3 10 chr2 143344734 143345026 -107342828 + AluY SINE Alu 2 291 -20 1234 202 61 76 chr2 143345026 143345172 -107342682 - MLT1B LTR MaLR -242 148 1 325 271 43 21 chr2 143345185 143345325 -107342529 - L1ME4a LINE L1 -2 6119 5977 27 0 0 0 chr2 143345815 143345842 -107342012 + AT_rich Low_complexity Low_complexity 1 27 0 23 54 0 0 chr2 143346649 143346686 -107341168 + AT_rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr2 143347101 143347137 -107340717 + AT_rich Low_complexity Low_complexity 1 36 0 1345 266 27 9 chr2 143347254 143347589 -107340265 + MER119 DNA MER1_type 1 341 -242 27 29 0 0 chr2 143347589 143347623 -107340231 + AT_rich Low_complexity Low_complexity 1 34 0 557 219 87 36 chr2 143347711 143347930 -107339924 + MER119 DNA MER1_type 354 583 0 22 35 0 0 chr2 143348720 143348749 -107339105 + AT_rich Low_complexity Low_complexity 1 29 0 244 347 66 21 chr2 143348916 143349158 -107338696 - L1ME4a LINE L1 -296 5825 5573 1353 84 11 0 chr2 143349168 143349347 -107338507 - AluSx SINE Alu -112 200 20 258 359 19 19 chr2 143350494 143350597 -107337257 + L2 LINE L2 3189 3291 -22 1491 180 77 11 chr2 143351378 143351650 -107336204 + AluJo SINE Alu 1 290 -22 353 296 169 14 chr2 143351761 143351903 -107335951 - MER5A DNA MER1_type -8 181 18 21 0 0 0 chr2 143351999 143352020 -107335834 + AT_rich Low_complexity Low_complexity 1 21 0 180 200 0 0 chr2 143352252 143352297 -107335557 + (TA)n Simple_repeat Simple_repeat 1 45 0 1809 155 30 0 chr2 143352297 143352593 -107335261 - MER7A DNA MER2_type 0 346 44 351 0 0 0 chr2 143352631 143352670 -107335184 + (TG)n Simple_repeat Simple_repeat 2 40 0 24 0 0 0 chr2 143353260 143353284 -107334570 + AT_rich Low_complexity Low_complexity 1 24 0 411 311 64 44 chr2 143353427 143353844 -107334010 - L1MC/D LINE L1 -347 5774 5352 259 327 136 26 chr2 143355237 143355509 -107332345 - L2 LINE L2 -1 3312 3011 311 326 43 0 chr2 143355510 143355648 -107332206 - L2 LINE L2 -555 2759 2616 208 179 0 0 chr2 143355892 143355931 -107331923 - MER5B DNA MER1_type -2 176 138 180 0 0 0 chr2 143355931 143355951 -107331903 + (TA)n Simple_repeat Simple_repeat 2 21 0 2006 102 4 7 chr2 143355974 143356249 -107331605 - AluSp SINE Alu -38 275 2 1316 146 5 23 chr2 143356253 143356473 -107331381 - AluJb SINE Alu -12 300 85 180 0 0 0 chr2 143356543 143356563 -107331291 + (CA)n Simple_repeat Simple_repeat 2 21 0 437 267 20 0 chr2 143356565 143356666 -107331188 - MER5B DNA MER1_type -75 103 1 22 35 0 0 chr2 143357860 143357889 -107329965 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr2 143358165 143358203 -107329651 + AT_rich Low_complexity Low_complexity 1 38 0 391 253 133 24 chr2 143360862 143361028 -107326826 - MIR SINE MIR -2 260 77 318 317 62 70 chr2 143361169 143361428 -107326426 + MIR SINE MIR 6 262 0 764 169 52 0 chr2 143361590 143361726 -107326128 - FRAM SINE Alu -35 141 1 12371 163 45 9 chr2 143362462 143364583 -107323271 + L1MA3 LINE L1 1 2197 -5368 11437 165 69 38 chr2 143364580 143366661 -107321193 + L1MA3 LINE L1 3905 6143 -1581 * 2136 127 0 6 chr2 143366661 143366975 -107320879 + AluSx SINE Alu 1 312 0 11437 165 69 38 chr2 143366975 143368341 -107319513 + L1MA3 LINE L1 6143 7465 -259 1469 135 12 0 chr2 143368514 143368766 -107319088 + L1MA2 LINE L1 6050 6304 0 372 349 51 22 chr2 143368784 143369189 -107318665 - L3 LINE CR1 -832 745 259 322 360 34 14 chr2 143369554 143369753 -107318101 - MIR SINE MIR -42 220 19 267 350 40 10 chr2 143370716 143370816 -107317038 - MER91C DNA MER1_type -26 114 12 24 53 0 0 chr2 143370995 143371033 -107316821 + AT_rich Low_complexity Low_complexity 1 38 0 182 234 21 21 chr2 143371575 143371622 -107316232 + MIR3 SINE MIR 119 165 -43 2135 137 0 0 chr2 143371837 143372143 -107315711 - AluSg SINE Alu -4 306 1 1023 239 66 42 chr2 143372563 143372944 -107314910 - MLT1B LTR MaLR 0 390 1 275 0 29 0 chr2 143374038 143374073 -107313781 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr2 143374538 143374560 -107313294 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr2 143374614 143374647 -107313207 + AT_rich Low_complexity Low_complexity 1 33 0 258 125 0 0 chr2 143374716 143374764 -107313090 + (TC)n Simple_repeat Simple_repeat 2 49 0 311 358 75 0 chr2 143375142 143375262 -107312592 - L2 LINE L2 0 3272 3144 266 353 95 26 chr2 143375560 143375792 -107312062 - L2 LINE L2 -470 2844 2597 613 290 97 14 chr2 143377367 143377574 -107310280 - MIR SINE MIR -37 225 2 232 191 24 0 chr2 143381368 143381452 -107306402 + (TA)n Simple_repeat Simple_repeat 2 87 0 317 337 52 64 chr2 143381543 143381715 -107306139 - MIR3 SINE MIR -19 189 20 323 306 95 14 chr2 143381856 143382003 -107305851 + MIR SINE MIR 55 213 -49 33 66 0 0 chr2 143382837 143382898 -107304956 + AT_rich Low_complexity Low_complexity 1 61 0 304 267 91 0 chr2 143382951 143383116 -107304738 - L1ME4a LINE L1 -168 5953 5774 29 78 0 0 chr2 143383116 143383180 -107304674 + AT_rich Low_complexity Low_complexity 1 64 0 24 0 0 0 chr2 143383566 143383590 -107304264 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr2 143383661 143383692 -107304162 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 143384271 143384293 -107303561 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 143385332 143385353 -107302501 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 143385439 143385461 -107302393 + AT_rich Low_complexity Low_complexity 1 22 0 34 0 0 0 chr2 143385830 143385864 -107301990 + AT_rich Low_complexity Low_complexity 1 34 0 231 226 81 0 chr2 143385967 143386029 -107301825 + L1MC/D LINE L1 5377 5443 -890 395 241 120 0 chr2 143386188 143386321 -107301533 + L1PA10 LINE L1 5681 5829 -339 567 66 0 0 chr2 143386431 143386507 -107301347 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 1904 140 0 0 chr2 143386834 143387112 -107300742 - AluSx SINE Alu -31 281 4 1912 161 81 5 chr2 143389202 143389586 -107298268 - L1PA16 LINE L1 -9 6157 5745 261 431 22 7 chr2 143389711 143389848 -107298006 - MIR3 SINE MIR -67 141 3 2206 123 0 0 chr2 143393368 143393678 -107294176 - AluSq SINE Alu -3 310 1 1750 175 0 10 chr2 143393732 143394024 -107293830 - AluJb SINE Alu -22 290 2 207 200 0 0 chr2 143394718 143394763 -107293091 + A-rich Low_complexity Low_complexity 1 45 0 21 57 0 0 chr2 143395469 143395504 -107292350 + AT_rich Low_complexity Low_complexity 1 35 0 390 130 91 0 chr2 143396025 143396102 -107291752 + AluS SINE Alu 3 86 -217 261 29 0 0 chr2 143396088 143396123 -107291731 + AluY SINE Alu 262 296 -6 * 1969 120 7 32 chr2 143396233 143396542 -107291312 + AluSq SINE Alu 1 301 -12 516 296 32 38 chr2 143396553 143396739 -107291115 - MIR SINE MIR 0 262 78 383 111 0 30 chr2 143396815 143396889 -107290965 - Alu SINE Alu -4 298 235 264 30 0 0 chr2 143397235 143397268 -107290586 + (TG)n Simple_repeat Simple_repeat 2 34 0 1825 176 28 8 chr2 143399062 143399420 -107288434 + MLT1A1 LTR MaLR 1 365 0 1989 140 0 0 chr2 143399814 143400139 -107287715 - AluSg SINE Alu 0 328 4 1812 177 59 13 chr2 143400195 143400568 -107287286 - MLT1B LTR MaLR 0 390 1 24 32 0 0 chr2 143400681 143400712 -107287142 + AT_rich Low_complexity Low_complexity 1 31 0 522 62 12 37 chr2 143400973 143401054 -107286800 - L1PA10 LINE L1 0 6168 6090 225 290 16 0 chr2 143401325 143401387 -107286467 + L2 LINE L2 3251 3313 0 232 328 30 0 chr2 143401504 143401571 -107286283 + L2 LINE L2 3233 3301 -12 223 314 57 67 chr2 143402764 143402869 -107284985 - L2 LINE L2 0 3272 3169 207 235 56 83 chr2 143403411 143403592 -107284262 + MIR SINE MIR 36 262 0 272 339 64 0 chr2 143403862 143403971 -107283883 - MIR SINE MIR -79 183 68 410 268 65 0 chr2 143404067 143404190 -107283664 + MIR SINE MIR 112 242 -20 224 321 95 63 chr2 143404259 143404480 -107283374 - L2 LINE L2 -932 2382 2155 344 316 112 58 chr2 143406662 143406975 -107280879 + MER102a DNA MER1_type 1 330 0 317 252 47 28 chr2 143407523 143407630 -107280224 - MIR SINE MIR 0 262 154 198 377 0 0 chr2 143407659 143407728 -107280126 - MIR SINE MIR -163 99 31 * 310 346 97 22 chr2 143407704 143407973 -107279881 - L2 LINE L2 -155 3117 2829 1415 92 69 0 chr2 143408454 143408671 -107279183 - MER39B LTR ERV1 -418 235 4 417 237 32 0 chr2 143408859 143408952 -107278902 - L2 LINE L2 -49 3264 3169 243 259 52 35 chr2 143409350 143409466 -107278388 - Tigger8 DNA MER2_type -350 316 199 493 195 156 13 chr2 143409906 143410060 -107277794 + MER5B DNA MER1_type 3 178 0 332 325 32 43 chr2 143410252 143410440 -107277414 + MER5A DNA MER1_type 4 189 0 307 350 42 46 chr2 143410768 143410985 -107276869 + L2 LINE L2 3003 3218 -54 195 258 43 65 chr2 143412374 143412467 -107275387 - L3 LINE CR1 -309 1268 1178 24 32 0 0 chr2 143412803 143412834 -107275020 + AT_rich Low_complexity Low_complexity 1 31 0 438 343 73 0 chr2 143413608 143413786 -107274068 + MIR SINE MIR 34 224 -38 250 277 36 0 chr2 143414726 143414809 -107273045 + MIR SINE MIR 170 255 -7 251 362 11 0 chr2 143414972 143415066 -107272788 - MIR3 SINE MIR -10 198 104 204 121 30 0 chr2 143415068 143415101 -107272753 + GA-rich Low_complexity Low_complexity 4 37 0 27 81 0 0 chr2 143415710 143415772 -107272082 + AT_rich Low_complexity Low_complexity 1 62 0 716 234 13 0 chr2 143416120 143416277 -107271577 + MER45A DNA AcHobo 20 178 0 * 1752 161 50 0 chr2 143416269 143416589 -107271265 + MER7A DNA MER2_type 1 345 -1 481 347 149 27 chr2 143416690 143417430 -107270424 - L2 LINE L2 -214 3058 2231 180 0 0 0 chr2 143417725 143417745 -107270109 + (TG)n Simple_repeat Simple_repeat 2 21 0 417 20 0 0 chr2 143418769 143418819 -107269035 + (TA)n Simple_repeat Simple_repeat 1 50 0 367 252 24 49 chr2 143419862 143419985 -107267869 + MIR SINE MIR 32 151 -111 548 296 67 6 chr2 143420496 143420675 -107267179 + MIR SINE MIR 2 191 -71 538 308 8 73 chr2 143420680 143420927 -107266927 + MIR SINE MIR 32 262 0 30 59 0 0 chr2 143421189 143421240 -107266614 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr2 143421782 143421804 -107266050 + AT_rich Low_complexity Low_complexity 1 22 0 2320 137 56 20 chr2 143422141 143422549 -107265305 - MSTC LTR MaLR -2 426 4 1406 217 109 6 chr2 143423420 143423742 -107264112 - MLT1D LTR MaLR -145 360 6 4058 212 17 143 chr2 143423747 143424594 -107263260 - MLT1D-int LTR MaLR 0 1371 813 5690 64 0 17 chr2 143424594 143425349 -107262505 - L1PA7 LINE L1 0 6154 5413 4058 212 17 143 chr2 143425349 143426071 -107261783 - MLT1D-int LTR MaLR -558 813 1 458 218 45 27 chr2 143426092 143426202 -107261652 - MLT1D LTR MaLR -114 391 280 198 341 185 15 chr2 143427386 143427521 -107260333 - MIR3 SINE MIR -35 173 16 1675 170 7 7 chr2 143427912 143428200 -107259654 - AluJo SINE Alu -24 288 1 23 0 0 0 chr2 143428360 143428383 -107259471 + AT_rich Low_complexity Low_complexity 1 23 0 229 305 26 118 chr2 143428741 143429013 -107258841 + L2 LINE L2 1564 1810 -1504 31 99 0 0 chr2 143429280 143429381 -107258473 + AT_rich Low_complexity Low_complexity 1 101 0 563 305 75 43 chr2 143429464 143429813 -107258041 - L1ME LINE L1 -366 5804 5431 1553 290 47 24 chr2 143429813 143430388 -107257466 - MLT1E LTR MaLR -3 590 3 563 305 75 43 chr2 143430388 143430569 -107257285 - L1ME LINE L1 -739 5431 5257 331 327 89 98 chr2 143430597 143431157 -107256697 + L2 LINE L2 1822 2376 -938 2147 103 7 0 chr2 143431422 143431712 -107256142 + AluSp SINE Alu 1 292 -21 349 372 60 44 chr2 143431857 143432354 -107255500 + L2 LINE L2 2805 3309 -4 325 306 9 0 chr2 143432473 143432581 -107255273 + MIR3 SINE MIR 94 202 -6 327 310 106 0 chr2 143432905 143433047 -107254807 - L2 LINE L2 -9 3304 3148 186 43 0 0 chr2 143433508 143433531 -107254323 + (TA)n Simple_repeat Simple_repeat 1 23 0 739 214 26 7 chr2 143433564 143433718 -107254136 - MIR SINE MIR -18 244 88 406 302 59 32 chr2 143433830 143434228 -107253626 + L1ME LINE L1 5022 5429 -749 300 276 112 35 chr2 143434240 143434410 -107253444 + L1ME LINE L1 5469 5651 -470 462 309 76 17 chr2 143434420 143434656 -107253198 + MIR SINE MIR 13 262 0 870 314 206 43 chr2 143435174 143435314 -107252540 + L3 LINE CR1 576 692 -885 301 164 0 0 chr2 143435314 143435369 -107252485 + L1MA2 LINE L1 6250 6304 0 870 314 206 43 chr2 143435369 143436066 -107251788 + L3 LINE CR1 692 1550 -27 376 292 21 96 chr2 143437119 143437359 -107250495 + L2 LINE L2 3092 3313 0 206 330 106 11 chr2 143437427 143437521 -107250333 - L2 LINE L2 -3 3310 3208 608 270 39 62 chr2 143437673 143437932 -107249922 + LTR16A1 LTR ERVL 203 455 -2 378 261 72 0 chr2 143438904 143439015 -107248839 - L2 LINE L2 -12 3301 3183 2189 101 0 0 chr2 143439158 143439435 -107248419 + AluSg SINE Alu 1 277 -33 1779 141 19 118 chr2 143439751 143440184 -107247670 - MLT1B LTR MaLR 0 390 1 3918 154 108 19 chr2 143440194 143440952 -107246902 - LTR1B LTR ERV1 0 826 1 349 293 71 29 chr2 143441339 143441479 -107246375 - L2 LINE L2 0 3313 3168 392 214 77 30 chr2 143441743 143441911 -107245943 - MER113 DNA MER1_type? -304 217 42 416 187 28 62 chr2 143442726 143442838 -107245016 + FLAM_A SINE Alu 35 132 -1 181 305 104 26 chr2 143442905 143443059 -107244795 + L2 LINE L2 1860 2025 -1289 6034 88 13 47 chr2 143443068 143444014 -107243840 - L1PA10 LINE L1 -1 6482 5569 21144 180 38 35 chr2 143444024 143449173 -107238681 - L1PA10 LINE L1 -1176 5285 10 194 348 75 25 chr2 143449181 143449342 -107238512 + L2 LINE L2 2018 2186 -1128 189 335 144 32 chr2 143449455 143449768 -107238086 + L2 LINE L2 2183 2530 -784 900 233 5 5 chr2 143449797 143449986 -107237868 + MER58A DNA MER1_type 36 224 0 1708 185 7 3 chr2 143450007 143450310 -107237544 + AluJo SINE Alu 1 304 -8 284 176 0 0 chr2 143450516 143450567 -107237287 - MLT1F LTR MaLR -1 541 491 250 272 46 15 chr2 143450729 143450840 -107237014 + Charlie8 DNA MER1_type 225 2417 0 232 231 106 39 chr2 143452826 143452930 -107234924 + L3 LINE CR1 1461 1571 -6 978 289 4 0 chr2 143453020 143453255 -107234599 + MIR SINE MIR 2 237 -25 220 392 0 0 chr2 143453411 143453508 -107234346 + MIR3 SINE MIR 82 178 -30 23 33 0 0 chr2 143453632 143453662 -107234192 + AT_rich Low_complexity Low_complexity 1 30 0 302 240 0 13 chr2 143454763 143454838 -107233016 + MLT1K LTR MaLR 509 582 -6 22 56 0 0 chr2 143456176 143456212 -107231642 + AT_rich Low_complexity Low_complexity 1 36 0 532 176 40 96 chr2 143457431 143457538 -107230316 + MER53 DNA DNA 2 95 -94 2004 131 0 7 chr2 143457538 143457828 -107230026 - AluSx SINE Alu -24 288 1 532 176 40 96 chr2 143457828 143457919 -107229935 + MER53 DNA DNA 95 189 0 272 314 85 42 chr2 143458619 143458855 -107228999 + L2 LINE L2 2632 2877 -437 1845 148 0 0 chr2 143459041 143459312 -107228542 - AluSx SINE Alu -41 271 1 443 272 66 149 chr2 143460514 143460815 -107227039 - L2 LINE L2 0 3272 2997 185 375 0 0 chr2 143460967 143461031 -107226823 - MIR SINE MIR -129 79 16 22 56 0 0 chr2 143461359 143461395 -107226459 + AT_rich Low_complexity Low_complexity 1 36 0 250 405 43 9 chr2 143462585 143462701 -107225153 + L2 LINE L2 3149 3268 -4 207 0 0 0 chr2 143463717 143463740 -107224114 + (A)n Simple_repeat Simple_repeat 1 23 0 272 317 124 33 chr2 143463897 143464116 -107223738 - L3b LINE CR1 -13 1564 1330 515 56 14 0 chr2 143464409 143464480 -107223374 + (TG)n Simple_repeat Simple_repeat 1 72 0 2208 130 40 11 chr2 143464699 143465053 -107222801 - THE1B LTR MaLR 0 364 1 402 21 0 0 chr2 143465153 143465200 -107222654 + (CA)n Simple_repeat Simple_repeat 1 47 0 500 304 0 68 chr2 143465217 143465424 -107222430 - MIR SINE MIR -10 252 60 208 242 60 26 chr2 143466851 143466953 -107220901 - MIR SINE MIR -61 147 96 195 256 0 0 chr2 143467122 143467161 -107220693 - MIR SINE MIR -168 94 56 243 0 0 0 chr2 143467202 143467229 -107220625 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 262 111 0 44 chr2 143467976 143468021 -107219833 - tRNA-Ile-ATT tRNA tRNA -33 44 2 1881 141 40 3 chr2 143468389 143468687 -107219167 - AluSx SINE Alu -3 309 1 557 100 0 38 chr2 143469706 143469786 -107218068 + AluSg/x SINE Alu 214 290 -22 798 109 0 0 chr2 143469786 143469905 -107217949 + (TA)n Simple_repeat Simple_repeat 2 120 0 348 175 0 0 chr2 143470148 143470205 -107217649 - MSTB LTR MaLR 0 426 370 2042 195 16 68 chr2 143470657 143470904 -107216950 - MSTB LTR MaLR 0 426 211 1459 167 56 4 chr2 143470904 143471173 -107216681 - AluJb SINE Alu -7 305 23 2042 195 16 68 chr2 143471173 143471367 -107216487 - MSTB LTR MaLR -215 211 8 550 310 38 58 chr2 143472143 143472640 -107215214 - L1ME4a LINE L1 -104 6017 5531 212 0 36 0 chr2 143473957 143473985 -107213869 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 180 0 0 0 chr2 143474046 143474066 -107213788 + (TG)n Simple_repeat Simple_repeat 2 21 0 370 343 22 39 chr2 143474558 143474736 -107213118 + MIR3 SINE MIR 23 197 -11 1013 80 43 6 chr2 143475359 143475521 -107212333 + L1MB4 LINE L1 6013 6180 0 31 26 0 0 chr2 143476442 143476480 -107211374 + AT_rich Low_complexity Low_complexity 1 38 0 1464 189 0 53 chr2 143476906 143477207 -107210647 + AluJo SINE Alu 17 301 -11 1563 193 114 26 chr2 143477262 143477718 -107210136 - LTR54B LTR ERV1 -2 496 1 2670 92 5 16 chr2 143477750 143478129 -107209725 + THE1C LTR MaLR 1 375 0 346 230 0 14 chr2 143478400 143478474 -107209380 - Tigger5 DNA MER2_type 0 2323 2251 256 218 0 18 chr2 143478443 143478498 -107209356 - Tigger5 DNA MER2_type -2269 54 1 * 1735 170 7 7 chr2 143480167 143480456 -107207398 + AluJb SINE Alu 3 291 -21 891 183 12 102 chr2 143481128 143481374 -107206480 - L1MC1 LINE L1 -6 6327 6104 1883 167 30 18 chr2 143481374 143481704 -107206150 - MER1B DNA MER1_type 0 339 6 4272 195 31 4 chr2 143481710 143482977 -107204877 - L1MC1 LINE L1 -223 6110 4815 229 340 0 32 chr2 143483293 143483387 -107204467 + MER5A DNA MER1_type 99 189 0 265 286 152 0 chr2 143483465 143483570 -107204284 - L2 LINE L2 0 3313 3193 2400 49 3 0 chr2 143484047 143484332 -107203522 + AluY SINE Alu 2 287 -24 206 32 32 0 chr2 143484335 143484366 -107203488 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 210 128 51 0 chr2 143484513 143484552 -107203302 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 235 258 56 45 chr2 143484702 143484791 -107203063 + MIR SINE MIR 54 143 -65 2166 118 0 10 chr2 143485066 143485379 -107202475 - AluSg SINE Alu 0 310 1 22 56 0 0 chr2 143486845 143486881 -107200973 + AT_rich Low_complexity Low_complexity 1 36 0 2056 123 3 0 chr2 143486923 143487234 -107200620 + AluSp SINE Alu 1 312 0 1405 172 95 40 chr2 143488875 143489148 -107198706 + AluJo SINE Alu 1 288 -24 330 304 61 9 chr2 143491856 143491971 -107195883 - L2 LINE L2 -16 3256 3136 2314 110 0 0 chr2 143492802 143493110 -107194744 - AluSc SINE Alu -1 308 1 33 56 0 0 chr2 143493515 143493569 -107194285 + AT_rich Low_complexity Low_complexity 1 54 0 336 280 121 6 chr2 143493655 143493812 -107194042 - L2 LINE L2 -22 3291 3117 1356 184 16 22 chr2 143493812 143494228 -107193626 - MLT1C-int LTR MaLR -838 533 2 1743 190 43 80 chr2 143494229 143494714 -107193140 - MLT1C LTR MaLR 0 467 1 2059 138 0 22 chr2 143495001 143495320 -107192534 - AluSq SINE Alu 0 313 2 23 0 0 0 chr2 143495634 143495657 -107192197 + AT_rich Low_complexity Low_complexity 1 23 0 2083 88 11 25 chr2 143496004 143496289 -107191565 + AluY SINE Alu 1 281 -30 321 177 0 32 chr2 143496886 143496948 -107190906 - tRNA-Arg-CGC tRNA tRNA -16 60 1 367 346 63 63 chr2 143498329 143498760 -107189094 - L2 LINE L2 -7 3265 2835 225 0 0 0 chr2 143498766 143498791 -107189063 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1013 64 0 57 chr2 143498791 143498932 -107188922 - L1PA3 LINE L1 -18 6137 6005 742 228 71 13 chr2 143499429 143499653 -107188201 - MER63C DNA MER1_type 0 930 694 2062 248 83 16 chr2 143499842 143500484 -107187370 - MER63C DNA MER1_type -245 685 1 2271 106 3 0 chr2 143500867 143501169 -107186685 - AluSp SINE Alu -10 303 1 1601 188 10 23 chr2 143501171 143501475 -107186379 - AluJo SINE Alu -12 300 1 223 375 27 45 chr2 143501988 143502100 -107185754 + L2 LINE L2 3158 3267 -5 186 133 0 0 chr2 143502104 143502134 -107185720 + (GGAA)n Simple_repeat Simple_repeat 3 32 0 2248 162 2 28 chr2 143502251 143502646 -107185208 - MLT1B LTR MaLR -5 385 1 21 36 0 0 chr2 143502771 143502799 -107185055 + AT_rich Low_complexity Low_complexity 1 28 0 3339 192 48 13 chr2 143503074 143503745 -107184109 + MER54A LTR ERVL 203 896 -5 270 0 0 0 chr2 143503917 143503947 -107183907 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr2 143503974 143504002 -107183852 + AT_rich Low_complexity Low_complexity 1 28 0 502 306 107 34 chr2 143504990 143505375 -107182479 - MLT1J1 LTR MaLR 0 446 34 341 58 19 0 chr2 143506746 143506798 -107181056 + (TG)n Simple_repeat Simple_repeat 2 54 0 393 267 51 57 chr2 143506829 143507005 -107180849 - L2 LINE L2 -125 3188 3014 363 23 0 0 chr2 143507439 143507483 -107180371 + (TG)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr2 143508086 143508110 -107179744 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 25 31 0 0 chr2 143509739 143509771 -107178083 + AT_rich Low_complexity Low_complexity 1 32 0 712 258 36 0 chr2 143509771 143509965 -107177889 - MER58C DNA MER1_type -1 214 14 2402 230 21 11 chr2 143510026 143510725 -107177129 - LTR27 LTR ERV1 -1 635 3 27 0 0 0 chr2 143510896 143510923 -107176931 + AT_rich Low_complexity Low_complexity 1 27 0 1288 178 163 0 chr2 143513228 143513486 -107174368 + AluSx SINE Alu 1 300 -2 399 41 0 0 chr2 143513486 143513535 -107174319 + (GGAA)n Simple_repeat Simple_repeat 1 49 0 369 0 0 0 chr2 143513886 143513927 -107173927 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 515 276 49 43 chr2 143514757 143514920 -107172934 - MER5B DNA MER1_type 0 178 15 22 0 0 0 chr2 143515628 143515650 -107172204 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr2 143516084 143516126 -107171728 + AT_rich Low_complexity Low_complexity 1 42 0 261 0 0 0 chr2 143517121 143517150 -107170704 + (TG)n Simple_repeat Simple_repeat 2 30 0 375 231 53 95 chr2 143518872 143519041 -107168813 + MER112 DNA MER1_type 1 162 -98 2117 176 43 17 chr2 143519890 143520398 -107167456 - LTR27 LTR ERV1 -11 493 2 2818 7 0 0 chr2 143520504 143520806 -107167048 - AluYb8 SINE Alu -16 302 1 1824 184 37 8 chr2 143521673 143522027 -107165827 + MLT1A1 LTR MaLR 2 365 0 291 28 0 0 chr2 143522625 143522661 -107165193 + (CA)n Simple_repeat Simple_repeat 2 37 0 208 135 0 0 chr2 143522866 143522903 -107164951 + (A)n Simple_repeat Simple_repeat 1 37 0 21 36 0 0 chr2 143524306 143524334 -107163520 + AT_rich Low_complexity Low_complexity 1 28 0 2599 42 0 3 chr2 143527274 143527583 -107160271 - AluY SINE Alu -3 308 1 966 166 151 5 chr2 143528226 143528431 -107159423 + AluJo SINE Alu 1 235 -77 423 0 0 0 chr2 143528774 143528821 -107159033 + (CA)n Simple_repeat Simple_repeat 1 47 0 2073 117 0 26 chr2 143529169 143529512 -107158342 - L1MB2 LINE L1 -1 6170 5837 206 219 0 0 chr2 143529587 143529628 -107158226 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 56 0 0 chr2 143529669 143529705 -107158149 + AT_rich Low_complexity Low_complexity 1 36 0 1372 161 16 21 chr2 143529978 143530220 -107157634 - AluJb SINE Alu -9 303 63 1522 144 0 0 chr2 143530268 143530504 -107157350 + AluSc SINE Alu 63 298 -11 34 65 0 0 chr2 143530583 143530645 -107157209 + AT_rich Low_complexity Low_complexity 1 62 0 2433 68 0 3 chr2 143531108 143531416 -107156438 + AluY SINE Alu 1 307 -4 23 0 0 0 chr2 143532073 143532096 -107155758 + AT_rich Low_complexity Low_complexity 1 23 0 2027 73 91 4 chr2 143534244 143534519 -107153335 + AluY SINE Alu 1 299 -12 1982 141 33 0 chr2 143536124 143536458 -107151396 - L1PA16 LINE L1 -9 6157 5813 258 373 110 33 chr2 143536563 143537225 -107150629 + L2 LINE L2 1933 2645 -669 236 291 85 78 chr2 143537914 143538196 -107149658 + L2 LINE L2 3026 3309 -4 27 0 0 0 chr2 143538247 143538274 -107149580 + AT_rich Low_complexity Low_complexity 1 27 0 203 397 0 0 chr2 143540168 143540246 -107147608 + MIR3 SINE MIR 88 165 -43 21 36 0 0 chr2 143540304 143540332 -107147522 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 143540990 143541018 -107146836 + AT_rich Low_complexity Low_complexity 1 28 0 470 333 22 11 chr2 143542521 143542701 -107145153 - MLT1J LTR MaLR -236 275 94 22 0 0 0 chr2 143543072 143543094 -107144760 + AT_rich Low_complexity Low_complexity 1 22 0 349 213 53 0 chr2 143543268 143543343 -107144511 + MIR SINE MIR 73 151 -111 261 0 0 0 chr2 143544187 143544216 -107143638 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 220 246 0 18 chr2 143544624 143544681 -107143173 - L2 LINE L2 0 3272 3217 307 122 0 20 chr2 143544719 143544768 -107143086 + MIR SINE MIR 210 257 -5 21 36 0 0 chr2 143544769 143544797 -107143057 + AT_rich Low_complexity Low_complexity 1 28 0 709 230 30 12 chr2 143545197 143545362 -107142492 - MER5A DNA MER1_type -21 168 1 227 233 23 0 chr2 143545712 143545888 -107141966 + (TA)n Simple_repeat Simple_repeat 1 180 0 244 194 35 0 chr2 143545978 143546122 -107141732 + (TA)n Simple_repeat Simple_repeat 2 150 0 260 181 41 0 chr2 143546147 143546318 -107141536 + (TA)n Simple_repeat Simple_repeat 2 179 0 474 107 65 6 chr2 143546350 143546519 -107141335 + (TA)n Simple_repeat Simple_repeat 1 179 0 301 326 62 28 chr2 143547157 143547301 -107140553 - L3 LINE CR1 -341 1236 1088 266 323 53 30 chr2 143547529 143547662 -107140192 + L3 LINE CR1 1415 1550 -27 21 0 0 0 chr2 143549089 143549110 -107138744 + AT_rich Low_complexity Low_complexity 1 21 0 2136 121 0 0 chr2 143550140 143550437 -107137417 - AluSg SINE Alu -13 297 1 582 321 81 0 chr2 143550816 143551037 -107136817 - MIR SINE MIR -19 243 5 485 311 104 10 chr2 143551877 143552070 -107135784 - MIR SINE MIR -6 256 46 326 376 128 34 chr2 143552461 143553430 -107134424 - L2 LINE L2 -338 2976 1917 201 341 32 63 chr2 143553463 143553589 -107134265 + L2 LINE L2 3192 3313 0 419 260 79 34 chr2 143553747 143553924 -107133930 + MIR SINE MIR 9 193 -69 1809 223 23 74 chr2 143554128 143554470 -107133384 - MLT1D LTR MaLR 0 505 198 616 203 8 0 chr2 143554470 143554588 -107133266 - FLAM_C SINE Alu -13 120 2 1809 223 23 74 chr2 143554588 143554775 -107133079 - MLT1D LTR MaLR -307 198 3 532 246 35 7 chr2 143555025 143555167 -107132687 + MIR SINE MIR 68 213 -49 1793 177 0 0 chr2 143555198 143555497 -107132357 + AluJb SINE Alu 13 311 -1 574 186 0 18 chr2 143555579 143555855 -107131999 + FLAM_C SINE Alu 9 282 0 975 214 0 0 chr2 143556400 143556587 -107131267 - AluJo SINE Alu -3 309 123 1691 160 10 42 chr2 143556613 143556925 -107130929 - AluJb SINE Alu -10 302 1 397 271 16 16 chr2 143557117 143557246 -107130608 - L1MC4a LINE L1 -1879 5929 5801 379 311 44 17 chr2 143557811 143557991 -107129863 - MIR SINE MIR -7 255 71 22 56 0 0 chr2 143558399 143558435 -107129419 + AT_rich Low_complexity Low_complexity 1 36 0 184 362 134 0 chr2 143558848 143558975 -107128879 + L2 LINE L2 3125 3268 -4 234 282 29 58 chr2 143559940 143560043 -107127811 + MIR3 SINE MIR 78 163 -45 920 267 94 7 chr2 143560239 143560527 -107127327 + MER58B DNA MER1_type 29 341 0 1901 155 3 10 chr2 143561188 143561491 -107126363 + AluSx SINE Alu 1 301 -11 293 287 0 0 chr2 143562503 143562573 -107125281 - MIR SINE MIR -66 142 79 216 163 0 0 chr2 143566101 143566144 -107121710 + CT-rich Low_complexity Low_complexity 1 43 0 2216 114 0 0 chr2 143567168 143567467 -107120387 - AluSx SINE Alu -13 299 1 719 333 103 30 chr2 143569117 143569705 -107118149 + L2 LINE L2 2684 3313 0 188 182 0 18 chr2 143573021 143573076 -107114778 + A-rich Low_complexity Low_complexity 2 55 0 458 301 125 0 chr2 143574031 143574207 -107113647 + MIR SINE MIR 1 198 -64 654 171 47 67 chr2 143574210 143574403 -107113451 + MER53 DNA DNA 1 189 0 294 169 0 0 chr2 143575348 143575413 -107112441 + CT-rich Low_complexity Low_complexity 1 65 0 1321 113 50 18 chr2 143575495 143575717 -107112137 + MER30 DNA MER1_type 2 230 0 21 0 0 0 chr2 143575886 143575907 -107111947 + AT_rich Low_complexity Low_complexity 1 21 0 246 242 141 10 chr2 143575951 143576050 -107111804 - L2 LINE L2 -20 3293 3182 199 319 29 0 chr2 143576239 143576308 -107111546 + L2 LINE L2 3235 3305 -8 296 337 126 29 chr2 143576692 143576867 -107110987 - MIR SINE MIR -62 200 9 825 196 50 11 chr2 143577922 143578101 -107109753 - MER5A DNA MER1_type -3 186 1 347 194 0 0 chr2 143578146 143578208 -107109646 - MLT1K LTR MaLR -26 562 501 25 75 0 0 chr2 143578390 143578443 -107109411 + AT_rich Low_complexity Low_complexity 1 53 0 292 149 15 15 chr2 143578735 143578802 -107109052 + GA-rich Low_complexity Low_complexity 2 68 0 378 0 0 0 chr2 143580767 143580809 -107107045 + (TA)n Simple_repeat Simple_repeat 2 43 0 2346 83 0 3 chr2 143581201 143581503 -107106351 - AluSq SINE Alu -12 301 1 29 0 0 0 chr2 143581787 143581816 -107106038 + AT_rich Low_complexity Low_complexity 1 29 0 296 338 60 15 chr2 143582101 143582234 -107105620 + L2 LINE L2 3134 3272 0 21 0 0 0 chr2 143582532 143582553 -107105301 + AT_rich Low_complexity Low_complexity 1 21 0 216 67 0 0 chr2 143582880 143582910 -107104944 + (TG)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr2 143583105 143583126 -107104728 + AT_rich Low_complexity Low_complexity 1 21 0 252 0 0 0 chr2 143583137 143583165 -107104689 + (T)n Simple_repeat Simple_repeat 1 28 0 1918 148 16 0 chr2 143583173 143583477 -107104377 + AluSq SINE Alu 1 309 -4 355 172 0 0 chr2 143583529 143583593 -107104261 - FRAM SINE Alu -34 132 69 1456 109 57 0 chr2 143583938 143584222 -107103632 + AluSg SINE Alu 18 315 0 2394 119 26 35 chr2 143584405 143584834 -107103020 + L1MA5A LINE L1 5861 6285 -12 1679 216 135 2 chr2 143585782 143586226 -107101628 + MLT1D LTR MaLR 3 505 0 366 23 0 0 chr2 143587039 143587082 -107100772 + (CA)n Simple_repeat Simple_repeat 2 44 0 225 0 0 0 chr2 143587081 143587106 -107100748 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 25 31 0 0 chr2 143587627 143587659 -107100195 + AT_rich Low_complexity Low_complexity 1 32 0 297 327 54 43 chr2 143588090 143588368 -107099486 + MLT1L LTR MaLR 197 477 -138 1553 181 11 18 chr2 143588634 143588916 -107098938 - AluJo SINE Alu -26 286 7 348 304 188 14 chr2 143589110 143589317 -107098537 - MIR SINE MIR -4 258 16 1900 40 48 24 chr2 143589348 143589600 -107098254 - AluY SINE Alu -52 259 2 1804 155 52 17 chr2 143589758 143590120 -107097734 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 143591155 143591176 -107096678 + AT_rich Low_complexity Low_complexity 1 21 0 2476 59 0 0 chr2 143591303 143591607 -107096247 - AluY SINE Alu -7 304 1 268 211 13 13 chr2 143592745 143592856 -107094998 + (TA)n Simple_repeat Simple_repeat 1 111 0 25 31 0 0 chr2 143593294 143593326 -107094528 + AT_rich Low_complexity Low_complexity 1 32 0 261 167 19 19 chr2 143593609 143593663 -107094191 + MLT1K LTR MaLR 191 244 -344 22 35 0 0 chr2 143594050 143594079 -107093775 + AT_rich Low_complexity Low_complexity 1 29 0 21 89 0 0 chr2 143595439 143595495 -107092359 + AT_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr2 143595658 143595686 -107092168 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 143596164 143596185 -107091669 + AT_rich Low_complexity Low_complexity 1 21 0 188 271 71 14 chr2 143596444 143596514 -107091340 + L2 LINE L2 3172 3245 -68 211 310 97 32 chr2 143596609 143596764 -107091090 + MIR SINE MIR 95 259 -3 342 0 0 0 chr2 143597276 143597314 -107090540 + (CA)n Simple_repeat Simple_repeat 1 38 0 31 0 0 0 chr2 143598113 143598144 -107089710 + AT_rich Low_complexity Low_complexity 1 31 0 284 229 10 31 chr2 143600749 143600845 -107087009 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 22 0 0 0 chr2 143601192 143601214 -107086640 + AT_rich Low_complexity Low_complexity 1 22 0 229 357 31 47 chr2 143602559 143602688 -107085166 + L2 LINE L2 3146 3272 0 285 367 65 24 chr2 143603030 143603199 -107084655 - L2 LINE L2 0 3272 3097 21 0 0 0 chr2 143604905 143604926 -107082928 + AT_rich Low_complexity Low_complexity 1 21 0 2314 69 20 0 chr2 143605201 143605504 -107082350 - AluY SINE Alu -1 310 2 223 267 178 39 chr2 143605535 143605715 -107082139 - L2 LINE L2 -21 3292 3088 408 309 60 0 chr2 143607379 143607547 -107080307 + MIR SINE MIR 85 262 0 21 36 0 0 chr2 143607950 143607978 -107079876 + AT_rich Low_complexity Low_complexity 1 28 0 221 296 56 0 chr2 143609154 143609225 -107078629 + L2 LINE L2 2994 3068 -204 29 28 0 0 chr2 143609959 143609995 -107077859 + AT_rich Low_complexity Low_complexity 1 36 0 462 350 32 36 chr2 143610730 143611007 -107076847 + L1MEd LINE L1 833 1108 -5011 421 325 153 36 chr2 143610992 143611660 -107076194 + L1M4 LINE L1 3111 3856 -2290 * 727 261 122 60 chr2 143611830 143612462 -107075392 + L1M4 LINE L1 4041 4711 -1435 23 54 0 0 chr2 143612899 143612936 -107074918 + AT_rich Low_complexity Low_complexity 1 37 0 249 234 32 43 chr2 143613257 143613351 -107074503 + MER94 DNA DNA 42 134 0 253 247 0 71 chr2 143613397 143613482 -107074372 + L1M1 LINE L1 5731 5809 -491 231 318 82 9 chr2 143613794 143613904 -107073950 + L2 LINE L2 3195 3312 -1 278 328 17 8 chr2 143614118 143614237 -107073617 - L1M4 LINE L1 -1841 4305 4186 265 127 79 32 chr2 143615494 143615557 -107072297 + L1MC4 LINE L1 6652 6717 -1325 306 0 0 0 chr2 143615570 143615604 -107072250 + (TG)n Simple_repeat Simple_repeat 1 34 0 205 114 0 57 chr2 143621269 143621304 -107066550 - MIR3 SINE MIR -25 183 151 331 322 47 47 chr2 143621346 143621557 -107066297 - L3b LINE CR1 -246 1337 1127 1717 169 26 13 chr2 143622282 143622584 -107065270 - AluJb SINE Alu -6 306 1 191 401 102 7 chr2 143623266 143623403 -107064451 + L2 LINE L2 3123 3272 0 255 331 158 0 chr2 143623673 143623806 -107064048 - MIR SINE MIR -36 226 73 181 234 43 0 chr2 143623989 143624036 -107063818 - L3b LINE CR1 -218 1365 1317 1059 143 36 0 chr2 143624533 143624729 -107063125 + L1MA6 LINE L1 6084 6286 -14 189 74 0 0 chr2 143625616 143625643 -107062211 + (TAAAAA)n Simple_repeat Simple_repeat 1 27 0 24 32 0 0 chr2 143626010 143626041 -107061813 + AT_rich Low_complexity Low_complexity 1 31 0 2141 135 0 0 chr2 143626596 143626907 -107060947 + AluSx SINE Alu 1 311 -1 1721 140 4 15 chr2 143627389 143627654 -107060200 - AluSg SINE Alu -47 263 2 495 304 139 8 chr2 143628164 143628430 -107059424 - L2 LINE L2 -1 3312 3012 2210 78 0 11 chr2 143629549 143629862 -107057992 + AluSc SINE Alu 2 311 0 2798 7 0 0 chr2 143630259 143630568 -107057286 + AluYa5 SINE Alu 1 309 -2 333 291 80 35 chr2 143630643 143630822 -107057032 - MIR SINE MIR -40 222 37 232 295 6 18 chr2 143631662 143631828 -107056026 + GA-rich Low_complexity Low_complexity 3 166 0 801 203 94 5 chr2 143634086 143634278 -107053576 + MER3 DNA MER1_type 1 209 0 24 0 0 0 chr2 143634386 143634410 -107053444 + AT_rich Low_complexity Low_complexity 1 24 0 303 390 37 18 chr2 143634530 143634748 -107053106 + MIR SINE MIR 28 249 -13 224 344 39 16 chr2 143634898 143635026 -107052828 + L2 LINE L2 3177 3307 -6 184 233 0 0 chr2 143636556 143636599 -107051255 + L2 LINE L2 3223 3265 -7 352 275 54 92 chr2 143637389 143637930 -107049924 + HAL1b LINE L1 98 617 -731 978 194 0 22 chr2 143638118 143638298 -107049556 + AluJo SINE Alu 1 176 -136 751 341 61 12 chr2 143638325 143638736 -107049118 + L1MC4a LINE L1 6417 6847 -961 295 304 35 0 chr2 143638788 143638903 -107048951 - L1ME3A LINE L1 -8 6162 6044 288 0 0 0 chr2 143639029 143639061 -107048793 + (T)n Simple_repeat Simple_repeat 1 32 0 21 0 0 0 chr2 143639687 143639708 -107048146 + AT_rich Low_complexity Low_complexity 1 21 0 276 175 44 44 chr2 143640000 143640137 -107047717 + (TA)n Simple_repeat Simple_repeat 2 138 0 583 167 20 0 chr2 143640137 143640239 -107047615 - AluJb SINE Alu -195 117 14 195 129 0 0 chr2 143640753 143640784 -107047070 + (TATATG)n Simple_repeat Simple_repeat 5 35 0 29 28 0 0 chr2 143641985 143642021 -107045833 + AT_rich Low_complexity Low_complexity 1 36 0 499 330 98 28 chr2 143642290 143642648 -107045206 + MLT1J2 LTR MaLR 65 447 -3 21 57 0 0 chr2 143644024 143644059 -107043795 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr2 143644150 143644186 -107043668 + AT_rich Low_complexity Low_complexity 1 36 0 249 319 155 13 chr2 143644913 143645139 -107042715 + L2 LINE L2 1308 1565 -1749 205 358 37 0 chr2 143645158 143645239 -107042615 + L2 LINE L2 3208 3291 -22 510 143 0 0 chr2 143645242 143645319 -107042535 + MADE1 DNA Mariner 4 80 0 310 310 50 35 chr2 143645439 143645700 -107042154 + L1ME LINE L1 5366 5630 -491 281 276 77 50 chr2 143646365 143646546 -107041308 + HAL1 LINE L1 2317 2502 -5 25 0 0 0 chr2 143646580 143646605 -107041249 + AT_rich Low_complexity Low_complexity 1 25 0 586 236 8 0 chr2 143646874 143647001 -107040853 - FLAM_C SINE Alu -5 128 1 630 314 126 0 chr2 143647177 143647384 -107040470 - MER45C DNA AcHobo -720 233 1 633 226 0 0 chr2 143647677 143647801 -107040053 - FRAM SINE Alu -37 139 16 1022 202 5 20 chr2 143648476 143648679 -107039175 + AluJo SINE Alu 95 294 -18 180 0 0 0 chr2 143648788 143648808 -107039046 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1745 172 7 7 chr2 143649037 143649339 -107038515 + AluJo SINE Alu 1 302 -10 243 0 0 0 chr2 143650423 143650450 -107037404 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 201 74 0 0 chr2 143651897 143651924 -107035930 + (T)n Simple_repeat Simple_repeat 1 27 0 1998 144 0 0 chr2 143651928 143652240 -107035614 - AluSx SINE Alu 0 312 1 1995 111 36 4 chr2 143655082 143655361 -107032493 + AluSx SINE Alu 3 290 -22 23 0 0 0 chr2 143656705 143656728 -107031126 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 143656930 143656953 -107030901 + AT_rich Low_complexity Low_complexity 1 23 0 197 301 96 14 chr2 143657330 143657403 -107030451 + L2 LINE L2 3156 3234 -38 226 303 22 11 chr2 143657964 143658053 -107029801 + L2 LINE L2 3145 3234 -38 227 125 0 21 chr2 143658053 143658101 -107029753 + LTR66 LTR ERVL 393 439 -171 259 82 0 41 chr2 143658106 143658155 -107029699 + (TA)n Simple_repeat Simple_repeat 1 47 0 28 48 0 0 chr2 143659983 143660025 -107027829 + AT_rich Low_complexity Low_complexity 1 42 0 318 298 103 15 chr2 143660360 143660539 -107027315 - MIR SINE MIR -56 206 8 23 54 0 0 chr2 143660727 143660764 -107027090 + AT_rich Low_complexity Low_complexity 1 37 0 28 29 0 0 chr2 143660868 143660903 -107026951 + AT_rich Low_complexity Low_complexity 1 35 0 1987 135 0 0 chr2 143660956 143661238 -107026616 - AluSq SINE Alu -23 290 9 237 269 0 0 chr2 143661640 143661718 -107026136 + T-rich Low_complexity Low_complexity 2 79 0 286 145 14 14 chr2 143662071 143662140 -107025714 + CT-rich Low_complexity Low_complexity 4 72 0 2241 123 7 0 chr2 143662513 143662822 -107025032 + AluSp SINE Alu 2 312 -1 224 197 15 45 chr2 143664975 143665041 -107022813 + A-rich Low_complexity Low_complexity 2 65 0 31 68 0 0 chr2 143668445 143668504 -107019350 + AT_rich Low_complexity Low_complexity 1 59 0 384 181 0 24 chr2 143668553 143668636 -107019218 + LTR33 LTR ERVL 434 514 -7 270 293 134 0 chr2 143669710 143669867 -107017987 - MER97a DNA MER1_type? -6 888 785 27 29 0 0 chr2 143669914 143669948 -107017906 + AT_rich Low_complexity Low_complexity 1 34 0 1957 236 80 23 chr2 143670236 143670808 -107017046 - MER97b DNA MER1_type? -448 605 1 198 301 64 64 chr2 143670959 143671132 -107016722 - MIR SINE MIR -75 187 15 1351 332 154 33 chr2 143671388 143673398 -107014456 - L2 LINE L2 -19 3294 986 360 0 0 0 chr2 143673510 143673550 -107014304 + (TG)n Simple_repeat Simple_repeat 1 40 0 336 24 0 0 chr2 143673737 143673778 -107014076 + (TG)n Simple_repeat Simple_repeat 2 42 0 207 69 0 0 chr2 143673993 143674022 -107013832 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 221 235 0 0 chr2 143674465 143674516 -107013338 + (TG)n Simple_repeat Simple_repeat 2 52 0 594 226 51 22 chr2 143675427 143675564 -107012290 - MER58B DNA MER1_type -9 332 192 362 335 42 33 chr2 143676109 143676321 -107011533 - L2 LINE L2 -33 3280 3067 341 349 30 6 chr2 143676391 143676560 -107011294 - L1ME LINE L1 -432 5689 5517 240 324 74 0 chr2 143676622 143676723 -107011131 - MIR SINE MIR -64 144 68 297 0 0 0 chr2 143677271 143677304 -107010550 + (T)n Simple_repeat Simple_repeat 1 33 0 611 62 0 0 chr2 143677822 143677903 -107009951 + Alu SINE Alu 221 301 -11 1628 197 55 60 chr2 143679133 143679682 -107008172 + LTR55 LTR ERV 1 546 -2 288 353 88 20 chr2 143679763 143679967 -107007887 - L3 LINE CR1 -285 1292 1075 796 202 29 58 chr2 143680299 143680348 -107007506 + L1MB3 LINE L1 5980 6029 -154 2478 156 121 4 chr2 143680348 143680828 -107007026 + MER34 LTR ERV1 4 539 -3 796 202 29 58 chr2 143680828 143680986 -107006868 + L1MB3 LINE L1 6029 6181 -2 2226 107 0 0 chr2 143681498 143681789 -107006065 - AluY SINE Alu -20 291 1 2330 246 18 50 chr2 143682193 143683179 -107004675 + L1PA16 LINE L1 4087 4985 -1161 5115 135 20 13 chr2 143683262 143684187 -107003667 + L1PA16 LINE L1 4965 5911 -255 2046 74 0 60 chr2 143684187 143684525 -107003329 - AluY SINE Alu 0 320 1 5115 135 20 13 chr2 143684525 143684774 -107003080 + L1PA16 LINE L1 5911 6157 -9 285 241 25 13 chr2 143685724 143685803 -107002051 + L1MC/D LINE L1 5694 5773 -2035 25 31 0 0 chr2 143686061 143686093 -107001761 + AT_rich Low_complexity Low_complexity 1 32 0 209 193 0 18 chr2 143687000 143687057 -107000797 + (TA)n Simple_repeat Simple_repeat 1 56 0 21 0 0 0 chr2 143687403 143687424 -107000430 + AT_rich Low_complexity Low_complexity 1 21 0 201 189 27 0 chr2 143690620 143690657 -106997197 + MIR SINE MIR 115 152 -110 1842 182 3 7 chr2 143690662 143690969 -106996885 + AluJb SINE Alu 1 306 -6 21 0 0 0 chr2 143691134 143691155 -106996699 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 143691248 143691268 -106996586 + (TA)n Simple_repeat Simple_repeat 1 20 0 369 0 0 0 chr2 143691291 143691332 -106996522 + (TG)n Simple_repeat Simple_repeat 2 42 0 255 125 0 0 chr2 143691332 143691372 -106996482 + (GA)n Simple_repeat Simple_repeat 2 41 0 305 160 66 9 chr2 143691822 143691928 -106995926 + LTR1B LTR ERV1 1 112 -714 3526 154 98 21 chr2 143692260 143693026 -106994828 + LTR1B LTR ERV1 1 825 -1 315 307 187 0 chr2 143694073 143694223 -106993631 + MIR SINE MIR 8 185 -77 191 345 0 0 chr2 143695355 143695410 -106992444 + L2 LINE L2 3252 3306 -7 24 0 0 0 chr2 143695647 143695671 -106992183 + AT_rich Low_complexity Low_complexity 1 24 0 356 235 12 0 chr2 143695882 143695963 -106991891 + LTR67 LTR ERVL 476 557 0 297 109 0 0 chr2 143696171 143696217 -106991637 + (A)n Simple_repeat Simple_repeat 1 46 0 238 328 98 16 chr2 143698045 143698167 -106989687 - L2 LINE L2 -1 3271 3140 237 33 0 0 chr2 143698176 143698206 -106989648 + (A)n Simple_repeat Simple_repeat 1 30 0 182 316 0 13 chr2 143699208 143699284 -106988570 + L2 LINE L2 2887 2961 -311 24 106 0 0 chr2 143701298 143701392 -106986462 + AT_rich Low_complexity Low_complexity 1 94 0 313 341 92 51 chr2 143701572 143701865 -106985989 + L1MEd LINE L1 115 419 -5700 401 268 101 54 chr2 143702099 143702813 -106985041 + L1MEd LINE L1 639 1398 -4865 2536 101 25 5 chr2 143702817 143703185 -106984669 + THE1C LTR MaLR 1 375 0 377 298 26 0 chr2 143703193 143703307 -106984547 + MER94 DNA DNA 1 117 -17 403 351 72 16 chr2 143703851 143704102 -106983752 + L1MEd LINE L1 2103 2367 -3762 528 157 34 0 chr2 143704104 143704193 -106983661 + FLAM_A SINE Alu 31 122 -20 481 292 60 56 chr2 143704195 143704709 -106983145 + L1MEd LINE L1 3829 4344 -1785 805 222 62 6 chr2 143704723 143704899 -106982955 + MLT1B LTR MaLR 204 389 -1 358 160 53 27 chr2 143704900 143704975 -106982879 - L1M4 LINE L1 -556 5618 5542 2052 85 39 26 chr2 143705376 143705682 -106982172 + AluY SINE Alu 2 311 0 290 235 42 106 chr2 143705691 143705908 -106981946 + L1MEd LINE L1 4450 4652 -1477 1870 199 16 21 chr2 143705951 143706387 -106981467 - L1MA9 LINE L1 -986 5143 4710 4525 162 47 65 chr2 143706387 143707523 -106980331 + L1MA9 LINE L1 5140 6255 -40 1512 235 48 0 chr2 143707727 143708140 -106979714 - MER63B DNA MER1_type -3 433 1 227 256 56 56 chr2 143708140 143708265 -106979589 + L1 LINE L1 4877 5001 -1128 22 35 0 0 chr2 143708566 143708595 -106979259 + AT_rich Low_complexity Low_complexity 1 29 0 429 300 23 0 chr2 143709070 143709200 -106978654 - MIR3 SINE MIR -7 201 69 327 324 43 53 chr2 143709881 143710088 -106977766 - L2 LINE L2 -421 2893 2689 241 73 0 55 chr2 143710753 143710808 -106977046 + (CAAAAA)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr2 143711941 143711962 -106975892 + AT_rich Low_complexity Low_complexity 1 21 0 1430 155 23 12 chr2 143712080 143712380 -106975474 - MER61B LTR ERV1 -28 396 1 367 252 17 17 chr2 143712447 143712566 -106975288 - MER97a DNA MER1_type? -715 179 61 254 95 24 0 chr2 143713781 143713823 -106974031 + (TA)n Simple_repeat Simple_repeat 2 44 0 324 0 0 0 chr2 143714198 143714234 -106973620 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 453 268 68 27 chr2 143714359 143714579 -106973275 + LTR16B LTR ERVL 236 464 0 21 0 0 0 chr2 143715385 143715406 -106972448 + AT_rich Low_complexity Low_complexity 1 21 0 2039 127 3 16 chr2 143715416 143715730 -106972124 + AluSx SINE Alu 1 310 -2 26 0 0 0 chr2 143716001 143716027 -106971827 + AT_rich Low_complexity Low_complexity 1 26 0 240 325 24 0 chr2 143716199 143716282 -106971572 + MIR SINE MIR 70 154 -108 1823 158 0 3 chr2 143716282 143716599 -106971255 + AluSx SINE Alu 1 316 0 383 298 72 56 chr2 143716695 143717000 -106970854 + HAL1b LINE L1 492 801 -547 22 56 0 0 chr2 143717041 143717077 -106970777 + AT_rich Low_complexity Low_complexity 1 36 0 2002 119 4 0 chr2 143717676 143717954 -106969900 - AluSc SINE Alu -30 279 1 27 0 0 0 chr2 143718496 143718523 -106969331 + AT_rich Low_complexity Low_complexity 1 27 0 1603 126 19 11 chr2 143719460 143719721 -106968133 - L1PB2 LINE L1 -1 6150 5888 4272 32 0 17 chr2 143720130 143720657 -106967197 - L1PA5 LINE L1 -21 6133 5616 462 286 167 0 chr2 143722698 143722890 -106964964 + MIR SINE MIR 34 257 -5 228 192 13 77 chr2 143723260 143723338 -106964516 + L1M4 LINE L1 5161 5233 -913 463 160 106 0 chr2 143723382 143723476 -106964378 + MER53 DNA DNA 2 105 -84 795 298 86 45 chr2 143723804 143724188 -106963666 + LTR33 LTR ERVL 53 459 -62 785 161 0 8 chr2 143724188 143724318 -106963536 + FLAM_C SINE Alu 1 129 -4 795 298 86 45 chr2 143724318 143724376 -106963478 + LTR33 LTR ERVL 459 513 -8 619 287 83 14 chr2 143724380 143724903 -106962951 - L1ME LINE L1 -512 5650 5096 231 327 19 93 chr2 143724906 143725068 -106962786 + L2 LINE L2 3123 3272 0 21 0 0 0 chr2 143725650 143725671 -106962183 + GC_rich Low_complexity Low_complexity 1 21 0 255 308 27 96 chr2 143727713 143727816 -106960038 - MER5A DNA MER1_type -1 188 96 1184 197 79 16 chr2 143727816 143728121 -106959733 - MER33 DNA MER1_type 0 324 1 255 308 27 96 chr2 143728121 143728163 -106959691 - MER5A DNA MER1_type -93 96 53 303 374 18 0 chr2 143728468 143728590 -106959264 - MIR SINE MIR -73 135 7 229 315 86 24 chr2 143730060 143730188 -106957666 - MIR SINE MIR -64 144 8 365 148 0 0 chr2 143730340 143730401 -106957453 + MER116 DNA Mariner 20 80 0 13413 29 0 0 chr2 143731667 143734043 -106953811 + L1PA2 LINE L1 3797 6172 0 22 88 0 0 chr2 143734043 143734100 -106953754 + AT_rich Low_complexity Low_complexity 1 57 0 273 261 146 115 chr2 143734397 143734692 -106953162 - L2 LINE L2 0 3313 3010 203 349 98 23 chr2 143734698 143734830 -106953024 - L2 LINE L2 -421 2893 2752 4662 161 35 50 chr2 143737401 143738518 -106949336 - L1MA7 LINE L1 -11 6280 5181 261 250 0 0 chr2 143741811 143741867 -106945987 - L2 LINE L2 -31 3241 3186 24 53 0 0 chr2 143743237 143743275 -106944579 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 143744571 143744592 -106943262 + AT_rich Low_complexity Low_complexity 1 21 0 268 375 79 27 chr2 143745446 143745774 -106942080 - L3 LINE CR1 -205 1372 1028 495 240 115 31 chr2 143746709 143746901 -106940953 + MER3 DNA MER1_type 1 208 -1 484 264 50 7 chr2 143747107 143747247 -106940607 + MIR3 SINE MIR 59 204 -4 495 339 117 22 chr2 143747258 143747725 -106940129 - L2 LINE L2 -175 3138 2633 553 306 44 44 chr2 143747774 143748071 -106939783 + MLT1J1 LTR MaLR 45 341 -105 2218 118 0 0 chr2 143749837 143750143 -106937711 + AluSq SINE Alu 1 306 -7 895 51 8 0 chr2 143750220 143750338 -106937516 - L1PA4 LINE L1 -2 6153 6035 631 130 69 15 chr2 143752212 143752343 -106935511 + L1MB4 LINE L1 6042 6179 -1 358 280 51 8 chr2 143752983 143753101 -106934753 + MIR SINE MIR 53 175 -87 225 154 0 0 chr2 143753608 143753647 -106934207 + T-rich Low_complexity Low_complexity 1 39 0 24 32 0 0 chr2 143755513 143755544 -106932310 + AT_rich Low_complexity Low_complexity 1 31 0 1524 141 91 55 chr2 143755606 143755967 -106931887 + THE1C LTR MaLR 1 374 -1 181 191 43 0 chr2 143756074 143756121 -106931733 + MIR3 SINE MIR 153 201 -7 23 33 0 0 chr2 143756379 143756409 -106931445 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 143756456 143756478 -106931376 + AT_rich Low_complexity Low_complexity 1 22 0 246 189 19 0 chr2 143757515 143757568 -106930286 - MER116 DNA Mariner -24 56 3 195 391 23 0 chr2 143757745 143757832 -106930022 - MIR SINE MIR -162 100 12 923 188 194 51 chr2 143757996 143758289 -106929565 + MER2 DNA MER2_type 7 341 -4 239 314 116 0 chr2 143759489 143759575 -106928279 - LTR33A LTR ERVL -365 158 63 259 294 24 0 chr2 143760551 143760636 -106927218 + (TATG)n Simple_repeat Simple_repeat 2 88 0 27 0 0 0 chr2 143761132 143761159 -106926695 + AT_rich Low_complexity Low_complexity 1 27 0 1558 188 53 78 chr2 143761162 143761674 -106926180 - MLT1D LTR MaLR -2 503 5 1574 105 156 0 chr2 143762029 143762286 -106925568 + AluSc SINE Alu 1 297 -2 296 296 129 0 chr2 143762449 143762581 -106925273 + MIR SINE MIR 100 248 -14 24 0 0 0 chr2 143762725 143762749 -106925105 + AT_rich Low_complexity Low_complexity 1 24 0 3623 188 70 42 chr2 143763183 143763502 -106924352 + MER4-int LTR ERV1 852 1161 -5437 234 0 0 0 chr2 143763502 143763528 -106924326 + (CA)n Simple_repeat Simple_repeat 2 27 0 3623 188 70 42 chr2 143763528 143763539 -106924315 + MER4-int LTR ERV1 1161 1170 -5428 922 200 0 0 chr2 143763539 143763704 -106924150 - FRAM SINE Alu -1 165 1 189 0 0 0 chr2 143763706 143763727 -106924127 + (TA)n Simple_repeat Simple_repeat 1 21 0 3623 188 70 42 chr2 143763727 143764361 -106923493 + MER4-int LTR ERV1 1170 1847 -4751 3834 145 88 43 chr2 143764582 143765415 -106922439 - MER4D LTR ERV1 -2 870 1 262 121 24 36 chr2 143766022 143766105 -106921749 + (TA)n Simple_repeat Simple_repeat 1 82 0 398 304 67 49 chr2 143766706 143766930 -106920924 - MIR SINE MIR 0 262 35 2104 127 36 30 chr2 143766930 143767292 -106920562 + THE1B LTR MaLR 1 364 0 27 29 0 0 chr2 143768183 143768217 -106919637 + AT_rich Low_complexity Low_complexity 1 34 0 240 324 15 0 chr2 143769237 143769305 -106918549 - L2 LINE L2 -8 3264 3196 210 261 58 14 chr2 143769375 143769444 -106918410 - MER91B DNA MER1_type -10 180 109 348 300 123 48 chr2 143769890 143770117 -106917737 + MIR SINE MIR 18 261 -1 238 152 76 13 chr2 143770483 143770562 -106917292 + (TA)n Simple_repeat Simple_repeat 2 85 0 2023 125 0 20 chr2 143770621 143770924 -106916930 + AluSx SINE Alu 1 297 -15 371 122 27 75 chr2 143771050 143771238 -106916616 + (TA)n Simple_repeat Simple_repeat 2 180 0 237 65 0 0 chr2 143771944 143771975 -106915879 + (A)n Simple_repeat Simple_repeat 1 31 0 254 313 62 39 chr2 143773867 143773995 -106913859 + MIR SINE MIR 60 190 -72 22 0 0 0 chr2 143774895 143774917 -106912937 + AT_rich Low_complexity Low_complexity 1 22 0 467 232 30 18 chr2 143775759 143775923 -106911931 + (TATATG)n Simple_repeat Simple_repeat 3 168 0 230 192 82 14 chr2 143775934 143776007 -106911847 + L1MC4 LINE L1 6616 6693 -1349 227 275 0 0 chr2 143776010 143776079 -106911775 + (TA)n Simple_repeat Simple_repeat 2 70 0 596 301 19 5 chr2 143776118 143776331 -106911523 + MER20 DNA MER1_type 1 216 -3 2479 54 0 3 chr2 143776343 143776641 -106911213 + AluY SINE Alu 14 310 -1 221 386 38 15 chr2 143778554 143778686 -106909168 - MIR3 SINE MIR -9 199 65 29 70 0 0 chr2 143779746 143779803 -106908051 + AT_rich Low_complexity Low_complexity 1 57 0 3102 137 84 0 chr2 143779836 143780347 -106907507 + MER41C LTR ERV1 1 554 0 202 381 17 23 chr2 143780401 143780577 -106907277 - L2 LINE L2 -973 2341 2167 243 206 16 0 chr2 143780966 143781029 -106906825 + A-rich Low_complexity Low_complexity 3 66 0 6842 48 11 14 chr2 143781268 143781769 -106906085 + L1PA7 LINE L1 4829 5330 -824 2485 47 3 0 chr2 143781769 143782070 -106905784 + AluY SINE Alu 1 302 -9 6842 48 11 14 chr2 143782070 143782882 -106904972 + L1PA7 LINE L1 5330 6139 -15 231 88 0 0 chr2 143782882 143782916 -106904938 + (TA)n Simple_repeat Simple_repeat 1 34 0 233 300 0 0 chr2 143782923 143783013 -106904841 - L1MC4 LINE L1 -1339 6703 6614 240 200 0 0 chr2 143783016 143783066 -106904788 + (TATATG)n Simple_repeat Simple_repeat 1 50 0 271 191 56 90 chr2 143783534 143783623 -106904231 + L2 LINE L2 3179 3264 -8 1404 171 20 48 chr2 143783651 143783944 -106903910 + AluJb SINE Alu 4 288 -24 24 91 0 0 chr2 143784551 143784617 -106903237 + AT_rich Low_complexity Low_complexity 1 66 0 1064 291 97 34 chr2 143785411 143786168 -106901686 + L2 LINE L2 2448 3251 -62 21 0 0 0 chr2 143786769 143786790 -106901064 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 143787816 143787840 -106900014 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 143788430 143788450 -106899404 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2015 124 0 19 chr2 143788711 143789025 -106898829 - AluSg SINE Alu -2 308 1 715 206 34 17 chr2 143790382 143790557 -106897297 - MER5A DNA MER1_type -5 184 7 199 283 236 9 chr2 143790916 143791022 -106896832 - L2 LINE L2 0 3313 3184 260 258 16 50 chr2 143791425 143791558 -106896296 - MIR SINE MIR -76 186 17 523 283 78 6 chr2 143793600 143793724 -106894130 - MIR SINE MIR -14 248 108 225 0 0 0 chr2 143793724 143793749 -106894105 + (CA)n Simple_repeat Simple_repeat 2 26 0 523 283 78 6 chr2 143793749 143793790 -106894064 - MIR SINE MIR -154 108 71 2995 229 52 16 chr2 143794241 143795074 -106892780 - L1ME1 LINE L1 -16 6150 5288 307 243 75 37 chr2 143795160 143795267 -106892587 + MER5A DNA MER1_type 22 132 -57 504 197 0 68 chr2 143795282 143795399 -106892455 + L1MC/D LINE L1 5412 5520 -839 1851 0 0 0 chr2 143797385 143797593 -106890261 - L1HS LINE L1 0 6155 5948 1674 203 121 17 chr2 143797783 143798196 -106889658 + MLT1C LTR MaLR 10 465 -2 211 318 59 0 chr2 143800840 143800925 -106886929 + L2 LINE L2 3178 3267 -5 390 285 0 54 chr2 143801386 143801572 -106886282 + MER5B DNA MER1_type 3 178 0 2514 103 11 0 chr2 143801825 143802175 -106885679 + THE1A LTR MaLR 2 355 0 21 36 0 0 chr2 143802708 143802736 -106885118 + AT_rich Low_complexity Low_complexity 1 28 0 301 316 85 29 chr2 143803658 143803795 -106884059 + MIR3 SINE MIR 15 159 -49 405 328 185 20 chr2 143803996 143804337 -106883517 - L3 LINE CR1 -129 1448 1052 182 182 23 23 chr2 143804553 143804597 -106883257 - MIR SINE MIR -35 227 184 494 305 76 74 chr2 143805787 143806276 -106881578 - L3 LINE CR1 -821 756 267 378 346 4 10 chr2 143811758 143811916 -106875938 - MIR SINE MIR -31 177 18 192 254 36 18 chr2 143812655 143812710 -106875144 + MIR SINE MIR 204 259 -3 304 324 36 2 chr2 143812958 143813098 -106874756 - MIR SINE MIR -47 161 16 276 252 73 49 chr2 143813188 143813311 -106874543 + MER91C DNA MER1_type 15 140 0 1103 269 127 12 chr2 143813624 143814025 -106873829 + MLT1J2 LTR MaLR 1 447 -3 288 315 43 25 chr2 143814317 143814476 -106873378 - MIR SINE MIR -47 161 1 206 266 38 0 chr2 143816193 143816272 -106871582 + (CATATA)n Simple_repeat Simple_repeat 2 83 0 359 330 47 19 chr2 143817237 143817449 -106870405 + L1ME LINE L1 5491 5708 -413 2138 103 7 3 chr2 143817514 143817816 -106870038 - AluSg SINE Alu 0 310 8 185 197 16 0 chr2 143819523 143819584 -106868270 + (TA)n Simple_repeat Simple_repeat 1 62 0 201 340 87 73 chr2 143819777 143820065 -106867789 - L2 LINE L2 -4 3268 2977 181 254 79 32 chr2 143820698 143820761 -106867093 + L2 LINE L2 3143 3208 -64 402 345 97 32 chr2 143821087 143821365 -106866489 - L2 LINE L2 -10 3303 3008 2195 119 0 0 chr2 143821917 143822219 -106865635 + AluSx SINE Alu 2 303 -9 23 0 0 0 chr2 143822804 143822827 -106865027 + AT_rich Low_complexity Low_complexity 1 23 0 1318 142 55 5 chr2 143824491 143824710 -106863144 - MER30 DNA MER1_type 0 230 1 200 310 17 0 chr2 143824738 143824796 -106863058 + L2 LINE L2 3205 3263 -9 392 306 61 27 chr2 143824908 143825055 -106862799 + MIR SINE MIR 55 206 -56 885 189 42 14 chr2 143825149 143825361 -106862493 + L1MB8 LINE L1 5947 6164 -14 22 56 0 0 chr2 143830843 143830879 -106856975 + AT_rich Low_complexity Low_complexity 1 36 0 1506 195 52 96 chr2 143831210 143831712 -106856142 - MLT1D LTR MaLR -3 502 23 793 201 26 188 chr2 143831757 143832140 -106855714 - MLT1D-int LTR MaLR -15 1356 1036 2208 233 26 41 chr2 143832210 143832868 -106854986 - MLT1D-int LTR MaLR -722 649 2 1904 201 43 51 chr2 143832869 143833376 -106854478 - MLT1D LTR MaLR 0 505 3 233 318 56 24 chr2 143834107 143834233 -106853621 + MER5B DNA MER1_type 2 131 -47 246 125 0 0 chr2 143835038 143835086 -106852768 + (TC)n Simple_repeat Simple_repeat 1 48 0 21 0 0 0 chr2 143835848 143835869 -106851985 + AT_rich Low_complexity Low_complexity 1 21 0 582 271 53 48 chr2 143836285 143836492 -106851362 - MIR SINE MIR -6 256 49 188 364 157 17 chr2 143837350 143837433 -106850421 + L2 LINE L2 2037 2107 -1207 1115 266 15 26 chr2 143837433 143837775 -106850079 + MER58B DNA MER1_type 1 338 -3 188 364 157 17 chr2 143837775 143838295 -106849559 + L2 LINE L2 2107 2725 -589 1385 124 55 0 chr2 143838534 143838752 -106849102 - MER30 DNA MER1_type 0 230 1 2194 123 88 13 chr2 143839696 143840094 -106847760 + MSTA LTR MaLR 1 428 0 321 396 74 25 chr2 143840350 143841069 -106846785 + L2 LINE L2 2036 2789 -525 221 250 0 0 chr2 143841740 143841792 -106846062 + CT-rich Low_complexity Low_complexity 2 53 0 24 0 0 0 chr2 143843481 143843505 -106844349 + AT_rich Low_complexity Low_complexity 1 24 0 284 350 126 11 chr2 143844524 143844707 -106843147 + MIR SINE MIR 32 235 -27 2136 129 0 7 chr2 143845547 143845857 -106841997 - AluSx SINE Alu -4 308 1 183 42 0 0 chr2 143846573 143846597 -106841257 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 759 189 0 0 chr2 143847698 143847825 -106840029 - FLAM_A SINE Alu -6 127 1 696 266 6 18 chr2 143847888 143848057 -106839797 - MIR SINE MIR -66 196 30 2145 107 0 7 chr2 143850031 143850329 -106837525 - AluSx SINE Alu -16 296 1 291 302 50 90 chr2 143850607 143850829 -106837025 + L2 LINE L2 2478 2690 -624 194 371 16 0 chr2 143851418 143851480 -106836374 + L2 LINE L2 3134 3196 -76 * 206 171 0 0 chr2 143851471 143851506 -106836348 - L2 LINE L2 0 3272 3238 1787 92 15 26 chr2 143852389 143852700 -106835154 + AluSc SINE Alu 14 321 0 339 203 0 0 chr2 143852778 143852847 -106835007 + MER53 DNA DNA 121 189 0 30 77 0 0 chr2 143853612 143853677 -106834177 + AT_rich Low_complexity Low_complexity 1 65 0 28 48 0 0 chr2 143854128 143854170 -106833684 + AT_rich Low_complexity Low_complexity 1 42 0 2524 58 0 0 chr2 143854741 143855050 -106832804 + AluY SINE Alu 1 309 -2 504 242 42 8 chr2 143855091 143855211 -106832643 - L2 LINE L2 -10 3303 3180 193 235 37 49 chr2 143856355 143856436 -106831418 - MIR SINE MIR -58 204 125 29 28 0 0 chr2 143856943 143856979 -106830875 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 73 chr2 143857419 143857460 -106830394 + AT_rich Low_complexity Low_complexity 1 38 0 408 307 129 80 chr2 143857720 143858248 -106829606 + MLT1L LTR MaLR 43 596 -19 189 0 0 0 chr2 143858678 143858699 -106829155 + (TG)n Simple_repeat Simple_repeat 2 22 0 1693 211 31 3 chr2 143859940 143860295 -106827559 - MLT1A1 LTR MaLR 0 365 1 202 247 123 0 chr2 143860709 143860782 -106827072 + MIR SINE MIR 54 135 -73 33 85 0 0 chr2 143860786 143860868 -106826986 + AT_rich Low_complexity Low_complexity 1 82 0 1211 171 31 0 chr2 143862767 143862995 -106824859 - L1PA16 LINE L1 -2 6164 5930 195 161 0 0 chr2 143863185 143863216 -106824638 + L2 LINE L2 3183 3213 -100 25 31 0 0 chr2 143864452 143864484 -106823370 + AT_rich Low_complexity Low_complexity 1 32 0 308 294 0 0 chr2 143867059 143867127 -106820727 + polypurine Low_complexity Low_complexity 3 70 0 580 302 85 27 chr2 143867767 143868168 -106819686 + MARNA DNA Mariner 148 571 -15 32 0 0 0 chr2 143868681 143868713 -106819141 + AT_rich Low_complexity Low_complexity 1 32 0 192 346 129 10 chr2 143871363 143871464 -106816390 - L2 LINE L2 -540 2774 2662 21 0 0 0 chr2 143871948 143871969 -106815885 + AT_rich Low_complexity Low_complexity 1 21 0 387 337 47 57 chr2 143872502 143872695 -106815159 - MIR SINE MIR -50 212 22 26 50 0 0 chr2 143873087 143873127 -106814727 + AT_rich Low_complexity Low_complexity 1 40 0 1793 188 80 19 chr2 143873347 143873720 -106814134 + MSTD LTR MaLR 1 396 0 2041 103 0 60 chr2 143873762 143874087 -106813767 - AluSx SINE Alu 0 309 3 30 0 0 0 chr2 143874098 143874128 -106813726 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 143874285 143874308 -106813546 + AT_rich Low_complexity Low_complexity 1 23 0 523 355 36 18 chr2 143877034 143877200 -106810654 - MER91A DNA MER1_type -6 190 22 342 332 137 32 chr2 143877314 143877504 -106810350 - MIR SINE MIR -21 241 32 201 239 0 0 chr2 143877917 143877963 -106809891 + (CTA)n Simple_repeat Simple_repeat 1 46 0 340 298 53 8 chr2 143877988 143878119 -106809735 - MIR SINE MIR -59 203 67 479 259 20 27 chr2 143879000 143879147 -106808707 - MIR3 SINE MIR -60 148 3 374 365 6 0 chr2 143879798 143879957 -106807897 - MER117 DNA MER1_type -36 161 2 3357 154 52 6 chr2 143880308 143880956 -106806898 + L1MA4 LINE L1 5622 6299 -1 947 195 29 29 chr2 143881121 143881331 -106806523 + L1MD3 LINE L1 6787 6996 -999 726 54 80 11 chr2 143881436 143881795 -106806059 + (TA)n Simple_repeat Simple_repeat 1 383 0 304 222 0 22 chr2 143881797 143881887 -106805967 + L1MC4 LINE L1 7066 7153 -889 1614 160 89 3 chr2 143881890 143882172 -106805682 + AluSx SINE Alu 3 308 -4 1840 234 51 17 chr2 143882178 143882703 -106805151 + L1MD3 LINE L1 7443 7985 -10 219 36 0 0 chr2 143883553 143883581 -106804273 + (TG)n Simple_repeat Simple_repeat 1 28 0 186 43 0 0 chr2 143883580 143883603 -106804251 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 453 283 78 6 chr2 143883637 143883803 -106804051 + Charlie8 DNA MER1_type 98 275 -2142 2050 133 13 0 chr2 143886066 143886366 -106801488 - AluSx SINE Alu -8 304 1 491 328 136 36 chr2 143887111 143887795 -106800059 + L2 LINE L2 2553 3313 0 25 0 0 0 chr2 143887932 143887957 -106799897 + AT_rich Low_complexity Low_complexity 1 25 0 1259 110 6 0 chr2 143889990 143890172 -106797682 - L1PA14 LINE L1 -1 6160 5978 22 103 0 0 chr2 143893185 143893263 -106794591 + AT_rich Low_complexity Low_complexity 1 78 0 438 20 0 0 chr2 143893322 143893373 -106794481 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 489 34 0 0 chr2 143895535 143895594 -106792260 + (TC)n Simple_repeat Simple_repeat 2 60 0 26 30 0 0 chr2 143896743 143896776 -106791078 + GC_rich Low_complexity Low_complexity 1 33 0 181 28 111 0 chr2 143897701 143897737 -106790117 + T-rich Low_complexity Low_complexity 2 41 0 1422 69 5 5 chr2 143898430 143898618 -106789236 - AluY SINE Alu -13 298 111 225 94 0 0 chr2 143898785 143898817 -106789037 + (TG)n Simple_repeat Simple_repeat 1 32 0 * 237 33 0 0 chr2 143898816 143898846 -106789008 + (GA)n Simple_repeat Simple_repeat 1 30 0 2239 99 0 7 chr2 143899697 143900001 -106787853 + AluSc SINE Alu 1 302 -7 250 250 16 0 chr2 143901148 143901212 -106786642 + GA-rich Low_complexity Low_complexity 1 65 0 346 366 29 23 chr2 143902250 143902425 -106785429 - MIR3 SINE MIR -1 207 32 216 67 0 0 chr2 143902457 143902487 -106785367 + (TTG)n Simple_repeat Simple_repeat 2 31 0 309 309 75 0 chr2 143902525 143902619 -106785235 - L2 LINE L2 0 3313 3213 199 286 0 0 chr2 143903798 143903847 -106784007 + L2 LINE L2 3218 3266 -6 344 77 19 0 chr2 143904834 143904886 -106782968 + (TA)n Simple_repeat Simple_repeat 1 53 0 31 26 0 0 chr2 143906565 143906603 -106781251 + AT_rich Low_complexity Low_complexity 1 38 0 1972 147 3 0 chr2 143907121 143907414 -106780440 + AluSx SINE Alu 1 294 -18 186 336 107 8 chr2 143908037 143908159 -106779695 - L2 LINE L2 -210 3062 2929 246 350 25 0 chr2 143909587 143909667 -106778187 - L2 LINE L2 -5 3267 3186 303 322 50 57 chr2 143910054 143910337 -106777517 + L1M4 LINE L1 4547 4827 -1319 2253 116 3 0 chr2 143911305 143911616 -106776238 + AluSq SINE Alu 1 312 -1 291 315 63 14 chr2 143911822 143911965 -106775889 + MIR SINE MIR 84 233 -29 355 341 67 0 chr2 143912169 143912333 -106775521 - MER5B DNA MER1_type -3 175 1 2220 102 3 10 chr2 143912427 143912741 -106775113 + AluSx SINE Alu 1 312 0 234 337 30 50 chr2 143913705 143913806 -106774048 - MIR SINE MIR -63 145 47 320 43 22 0 chr2 143914985 143915031 -106772823 + (TC)n Simple_repeat Simple_repeat 2 48 0 282 194 0 0 chr2 143915030 143915097 -106772757 + (TG)n Simple_repeat Simple_repeat 2 68 0 * 238 332 53 75 chr2 143915183 143915502 -106772352 + L2 LINE L2 2388 2699 -615 286 278 93 0 chr2 143915542 143915639 -106772215 + MIR SINE MIR 72 177 -85 306 353 77 41 chr2 143915662 143915832 -106772022 - MIR3 SINE MIR -24 184 9 291 122 0 0 chr2 143916594 143916643 -106771211 + (CAT)n Simple_repeat Simple_repeat 3 51 0 257 275 121 40 chr2 143916664 143916813 -106771041 - MIR SINE MIR -13 249 89 351 0 0 0 chr2 143916842 143916881 -106770973 + (TTA)n Simple_repeat Simple_repeat 3 41 0 1011 33 0 0 chr2 143916881 143917001 -106770853 - L1PA5 LINE L1 -18 6136 6017 191 163 0 23 chr2 143918577 143918620 -106769234 + CT-rich Low_complexity Low_complexity 4 45 0 798 171 17 6 chr2 143918624 143918800 -106769054 + T-rich Low_complexity Low_complexity 1 178 0 216 97 0 0 chr2 143918801 143918832 -106769022 + (TTCC)n Simple_repeat Simple_repeat 4 34 0 1449 185 0 29 chr2 143918832 143919113 -106768741 - AluJb SINE Alu -39 273 1 3723 236 48 14 chr2 143919144 143921062 -106766792 - L1MB7 LINE L1 -89 6593 4602 2269 84 3 3 chr2 143921071 143921370 -106766484 + AluY SINE Alu 1 299 -12 4267 207 63 64 chr2 143921371 143921558 -106766296 - L1MB7 LINE L1 -4764 1880 1694 1840 36 0 0 chr2 143921558 143921778 -106766076 + L1PA3 LINE L1 5934 6153 -2 4267 207 63 64 chr2 143921778 143923072 -106764782 - L1MB7 LINE L1 -4950 1694 309 25 0 0 0 chr2 143923243 143923268 -106764586 + AT_rich Low_complexity Low_complexity 1 25 0 710 317 138 37 chr2 143923784 143924683 -106763171 + L1ME3A LINE L1 2778 3767 -2379 257 135 19 0 chr2 143924692 143924744 -106763110 + GA-rich Low_complexity Low_complexity 1 53 0 240 150 0 0 chr2 143925338 143925378 -106762476 + MER116 DNA Mariner 2 41 -39 255 262 0 16 chr2 143925471 143925532 -106762322 + GA-rich Low_complexity Low_complexity 3 62 0 394 272 80 28 chr2 143925563 143925776 -106762078 + L1ME3A LINE L1 5096 5319 -827 234 254 64 18 chr2 143925817 143925927 -106761927 + L1ME3A LINE L1 5374 5488 -2320 12866 167 16 21 chr2 143926017 143926382 -106761472 + L1PA13 LINE L1 2849 3214 -2949 189 0 0 0 chr2 143926382 143926403 -106761451 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 12866 167 16 21 chr2 143926403 143928580 -106759274 + L1PA13 LINE L1 3214 5434 -729 1654 189 14 3 chr2 143928580 143928876 -106758978 + AluSx SINE Alu 1 299 -13 12866 167 16 21 chr2 143928876 143929599 -106758255 + L1PA13 LINE L1 5434 6159 -4 371 320 54 61 chr2 143929667 143929945 -106757909 + L1ME3A LINE L1 5676 5951 -219 21 0 0 0 chr2 143930190 143930211 -106757643 + AT_rich Low_complexity Low_complexity 1 21 0 211 192 154 0 chr2 143930360 143930412 -106757442 + MIR3 SINE MIR 146 205 -3 206 30 91 0 chr2 143930772 143930805 -106757049 + A-rich Low_complexity Low_complexity 4 39 0 274 269 8 17 chr2 143931125 143931244 -106756610 + (TA)n Simple_repeat Simple_repeat 1 118 0 334 278 9 44 chr2 143931319 143931462 -106756392 + L1ME LINE L1 5504 5643 -527 21 57 0 0 chr2 143932340 143932375 -106755479 + AT_rich Low_complexity Low_complexity 1 35 0 1594 171 27 3 chr2 143932725 143933017 -106754837 + L1MA9 LINE L1 5375 5673 -639 983 241 34 21 chr2 143933020 143933311 -106754543 + L1MA9 LINE L1 5977 6271 -41 2079 35 4 0 chr2 143933339 143933594 -106754260 - L1PA4 LINE L1 -179 5976 5721 1403 30 0 0 chr2 143933597 143933764 -106754090 + L1PA4 LINE L1 5986 6152 -3 28 0 0 0 chr2 143933764 143933792 -106754062 + AT_rich Low_complexity Low_complexity 1 28 0 732 283 78 9 chr2 143933807 143934026 -106753828 - MIR SINE MIR 0 262 29 831 201 6 6 chr2 143934600 143934764 -106753090 + L1M2 LINE L1 5612 5775 -537 188 364 27 18 chr2 143936131 143936241 -106751613 - MIR SINE MIR -121 141 31 222 91 0 0 chr2 143936275 143936308 -106751546 + (CA)n Simple_repeat Simple_repeat 2 34 0 300 317 0 0 chr2 143937587 143937669 -106750185 - L1MC4 LINE L1 -1346 6696 6615 368 285 59 47 chr2 143938089 143938295 -106749559 - L1M2 LINE L1 -610 5556 5362 2772 3 0 0 chr2 143938643 143938946 -106748908 + AluYa5 SINE Alu 1 303 -8 185 261 80 68 chr2 143938986 143939074 -106748780 - MER5C DNA MER1_type -230 94 6 230 179 18 0 chr2 143939135 143939191 -106748663 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 389 125 0 62 chr2 143939828 143939892 -106747962 - Tigger5 DNA MER2_type 0 2323 2264 298 211 0 0 chr2 143939988 143940040 -106747814 - Tigger5 DNA MER2_type -2271 52 1 23 54 0 0 chr2 143940165 143940202 -106747652 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 143941116 143941137 -106746717 + AT_rich Low_complexity Low_complexity 1 21 0 237 311 106 0 chr2 143941503 143941635 -106746219 + L1MC/D LINE L1 5620 5765 -2043 638 353 48 37 chr2 143942776 143943232 -106744622 - L3 LINE CR1 -781 796 336 1983 138 52 19 chr2 143943788 143944150 -106743704 + THE1C LTR MaLR 2 375 0 544 290 218 10 chr2 143944392 143944699 -106743155 - L2 LINE L2 -1 3312 2942 37 90 0 0 chr2 143944886 143944986 -106742868 + AT_rich Low_complexity Low_complexity 1 100 0 3097 151 49 53 chr2 143946627 143947423 -106740431 + LTR1 LTR ERV1 37 785 0 1785 121 4 4 chr2 143947629 143947894 -106739960 - AluSc SINE Alu -6 303 39 733 248 0 0 chr2 143948028 143948173 -106739681 + AluJb SINE Alu 139 283 -29 2377 123 19 6 chr2 143948841 143949200 -106738654 + THE1B LTR MaLR 1 364 0 1057 322 64 38 chr2 143949763 143949962 -106737892 - MER20B DNA MER1_type -5 778 586 2109 128 0 0 chr2 143949962 143950259 -106737595 - AluY SINE Alu -12 299 3 1057 322 64 38 chr2 143950259 143950287 -106737567 - MER20B DNA MER1_type -197 586 560 2130 127 33 25 chr2 143950287 143950648 -106737206 - THE1B LTR MaLR 0 364 1 1057 322 64 38 chr2 143950648 143951149 -106736705 - MER20B DNA MER1_type -223 560 30 22 56 0 0 chr2 143951272 143951308 -106736546 + AT_rich Low_complexity Low_complexity 1 36 0 361 282 39 21 chr2 143951625 143951779 -106736075 + MIR3 SINE MIR 34 191 -17 1725 80 0 0 chr2 143951791 143952004 -106735850 - AluSq SINE Alu -20 293 81 274 196 33 11 chr2 143952518 143952610 -106735244 + (TA)n Simple_repeat Simple_repeat 2 95 0 3209 159 8 26 chr2 143952627 143953245 -106734609 - L1MA6 LINE L1 0 6300 5694 2140 119 0 3 chr2 143953879 143954189 -106733665 + AluSx SINE Alu 1 309 -3 197 258 76 0 chr2 143954491 143954557 -106733297 + L2 LINE L2 3227 3297 -16 1214 169 149 45 chr2 143954582 143955031 -106732823 + LTR54B LTR ERV1 1 496 -2 213 225 0 0 chr2 143955104 143955144 -106732710 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 229 409 31 24 chr2 143955158 143955285 -106732569 - MER5A DNA MER1_type -1 188 61 464 179 11 11 chr2 143955722 143955817 -106732037 - MER46C DNA MER2_type -1 337 243 554 271 45 32 chr2 143956396 143956617 -106731237 - MER46C DNA MER2_type -92 246 23 270 152 30 30 chr2 143957032 143957098 -106730756 + LTR33A LTR ERVL 458 523 0 24 0 0 0 chr2 143957812 143957836 -106730018 + AT_rich Low_complexity Low_complexity 1 24 0 217 0 0 57 chr2 143958735 143958770 -106729084 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 499 258 12 18 chr2 143958770 143958937 -106728917 - L1MC/D LINE L1 -2294 5514 5349 1180 77 0 0 chr2 143958946 143959101 -106728753 - L1PA5 LINE L1 -8 6146 5992 494 230 44 119 chr2 143959581 143959833 -106728021 + L2 LINE L2 3077 3309 -4 725 272 51 18 chr2 143959932 143960149 -106727705 - MER58A DNA MER1_type 0 224 1 1863 171 43 3 chr2 143960939 143961290 -106726564 + L1PA16 LINE L1 5778 6142 -24 735 158 8 16 chr2 143962010 143962137 -106725717 + AluJ SINE Alu 1 126 -176 424 153 25 76 chr2 143962148 143962266 -106725588 + AluJ SINE Alu 201 312 0 194 192 96 0 chr2 143962556 143962608 -106725246 + L2 LINE L2 3257 3313 0 404 282 55 0 chr2 143963454 143963564 -106724290 + L1ME3 LINE L1 5959 6074 -88 24 0 0 0 chr2 143963624 143963648 -106724206 + AT_rich Low_complexity Low_complexity 1 24 0 344 206 103 10 chr2 143965155 143965252 -106722602 - MER58B DNA MER1_type 0 341 236 2257 61 3 7 chr2 143965399 143965694 -106722160 - AluY SINE Alu 0 311 18 561 329 29 38 chr2 143966270 143966586 -106721268 + L2 LINE L2 2419 2731 -583 14549 133 27 15 chr2 143966888 143969259 -106718595 + Tigger1 DNA MER2_type 11 2410 -8 338 342 83 46 chr2 143969268 143969508 -106718346 + L2 LINE L2 3024 3272 0 1772 150 4 0 chr2 143969757 143970031 -106717823 + AluSx SINE Alu 1 275 -37 210 71 0 0 chr2 143970035 143970063 -106717791 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 2077 69 0 8 chr2 143970697 143970959 -106716895 + AluSg1 SINE Alu 1 260 -49 22 0 0 0 chr2 143971793 143971815 -106716039 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr2 143972176 143972196 -106715658 + (T)n Simple_repeat Simple_repeat 1 20 0 746 312 145 46 chr2 143973256 143974342 -106713512 - HAL1 LINE L1 -1306 1201 9 1890 176 15 50 chr2 143974357 143974760 -106713094 - MLT1B LTR MaLR -1 389 1 23 54 0 0 chr2 143976197 143976234 -106711620 + AT_rich Low_complexity Low_complexity 1 37 0 424 217 19 0 chr2 143977822 143977928 -106709926 + MER103 DNA DNA 49 156 -10 468 305 39 13 chr2 143978435 143978625 -106709229 + MLT1I LTR MaLR 101 277 -132 296 220 20 70 chr2 143978609 143978709 -106709145 + MLT1J2 LTR MaLR 356 450 0 * 351 267 75 0 chr2 143979042 143979162 -106708692 - Charlie1 DNA MER1_type -1 2760 2632 1618 218 16 3 chr2 143979164 143979535 -106708319 - L1MD1 LINE L1 -1 6241 5866 7012 245 79 34 chr2 143979535 143985049 -106702805 - L1MD1 LINE L1 -316 6320 221 793 249 42 15 chr2 143985090 143985355 -106702499 - L1M4b LINE L1 -5310 1549 1278 216 243 0 0 chr2 143985355 143985429 -106702425 + CT-rich Low_complexity Low_complexity 2 75 0 21 36 0 0 chr2 143987338 143987366 -106700488 + AT_rich Low_complexity Low_complexity 1 28 0 2200 108 0 3 chr2 143990294 143990601 -106697253 - AluSp SINE Alu -3 310 5 1488 293 80 29 chr2 143991302 143992993 -106694861 + L1M4 LINE L1 1223 3141 -3997 242 106 0 21 chr2 143993001 143993048 -106694806 + LTR66 LTR ERVL 390 435 -175 260 224 0 17 chr2 143993049 143993107 -106694747 + (TATATG)n Simple_repeat Simple_repeat 6 62 0 243 0 0 0 chr2 143993157 143993184 -106694670 + (TA)n Simple_repeat Simple_repeat 1 27 0 6322 253 56 40 chr2 143993201 143995965 -106691889 + L1M4 LINE L1 3116 5927 -1030 189 0 0 0 chr2 143995965 143995986 -106691868 + (CA)n Simple_repeat Simple_repeat 2 22 0 6322 253 56 40 chr2 143995986 143996033 -106691821 + L1M4 LINE L1 5927 5972 -985 821 225 42 8 chr2 143996039 143996275 -106691579 + L1M4 LINE L1 6389 6632 -363 594 188 88 38 chr2 143996294 143996454 -106691400 - MLT1D LTR MaLR 0 505 338 592 160 9 0 chr2 143996454 143996560 -106691294 + L1MA9 LINE L1 2209 2315 -4474 * 5117 249 28 14 chr2 143996558 143998092 -106689762 + L1MA9 LINE L1 3184 4738 -2050 4050 221 20 16 chr2 143998102 143998880 -106688974 + L1MA9 LINE L1 5334 6107 -847 2064 129 131 8 chr2 143998880 143999261 -106688593 + MSTA LTR MaLR 1 428 0 4050 221 20 16 chr2 143999261 144000064 -106687790 + L1MA9 LINE L1 6107 6920 -34 23 0 0 0 chr2 144001561 144001584 -106686270 + AT_rich Low_complexity Low_complexity 1 23 0 2005 171 5 14 chr2 144003227 144003595 -106684259 + MER47A DNA MER2_type 2 366 0 21 71 0 0 chr2 144003786 144003828 -106684026 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 144004693 144004714 -106683140 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 144004989 144005011 -106682843 + AT_rich Low_complexity Low_complexity 1 22 0 1853 192 37 5 chr2 144005066 144005473 -106682381 + L1MA9 LINE L1 5487 5906 -406 1040 194 41 0 chr2 144005488 144005684 -106682170 + MER2 DNA MER2_type 7 210 -135 458 218 0 0 chr2 144005710 144005788 -106682066 + MER2 DNA MER2_type 268 345 0 1049 226 7 94 chr2 144005789 144006192 -106681662 + L1MA9 LINE L1 5906 6273 -39 1569 182 40 57 chr2 144006235 144006587 -106681267 + MER7A DNA MER2_type 2 345 -1 1984 172 99 19 chr2 144006797 144007221 -106680633 + MLT1C LTR MaLR 1 458 -9 189 337 84 12 chr2 144007565 144007648 -106680206 - MER5B DNA MER1_type -46 132 44 24 0 0 0 chr2 144009417 144009441 -106678413 + AT_rich Low_complexity Low_complexity 1 24 0 2410 223 6 6 chr2 144009454 144009961 -106677893 + L1ME1 LINE L1 5514 6020 -146 246 29 0 29 chr2 144009962 144009997 -106677857 + MER3 DNA MER1_type 16 49 -160 312 304 0 0 chr2 144009999 144010101 -106677753 + L1ME1 LINE L1 6060 6161 -5 225 281 62 31 chr2 144010129 144010225 -106677629 - L1ME4a LINE L1 -69 6052 5954 311 280 123 51 chr2 144010341 144010577 -106677277 - L1ME4a LINE L1 -314 5807 5555 1971 164 3 15 chr2 144010582 144010923 -106676931 + MER1B DNA MER1_type 1 337 0 1989 131 0 3 chr2 144011031 144011314 -106676540 + AluSq SINE Alu 2 283 -30 535 302 192 26 chr2 144011612 144011993 -106675861 + LTR33 LTR ERVL 78 521 0 469 135 0 4 chr2 144012304 144012436 -106675418 + MER53 DNA DNA 5 189 0 2068 213 10 10 chr2 144013172 144013585 -106674269 + MSTB LTR MaLR 8 420 -6 576 280 77 31 chr2 144015644 144015905 -106671949 - LTR33 LTR ERVL -28 493 221 1953 258 74 20 chr2 144015905 144016685 -106671169 + L1ME2 LINE L1 4037 4858 -1288 861 188 54 25 chr2 144016699 144016939 -106670915 - L1MC3 LINE L1 -20 7765 7519 * 1470 214 134 49 chr2 144016921 144017169 -106670685 + L1MEc LINE L1 1473 1698 -4517 2330 104 3 0 chr2 144017169 144017504 -106670350 + L1PA13 LINE L1 5822 6157 -6 1470 214 134 49 chr2 144017504 144017992 -106669862 + L1MEc LINE L1 1698 2178 -4037 1413 244 40 30 chr2 144018005 144018476 -106669378 + L1ME2 LINE L1 5679 6154 -10 222 37 0 0 chr2 144018529 144018556 -106669298 + (A)n Simple_repeat Simple_repeat 1 27 0 1482 185 29 7 chr2 144018997 144019273 -106668581 + AluJo SINE Alu 9 290 -22 414 0 0 0 chr2 144021203 144021249 -106666605 + (A)n Simple_repeat Simple_repeat 1 46 0 21 57 0 0 chr2 144021382 144021417 -106666437 + GC_rich Low_complexity Low_complexity 1 35 0 423 0 0 0 chr2 144022095 144022142 -106665712 + (A)n Simple_repeat Simple_repeat 1 47 0 4791 139 17 21 chr2 144022142 144022964 -106664890 - L1PA16 LINE L1 -10 6156 5338 8838 238 34 16 chr2 144023036 144024489 -106663365 - L1PA13 LINE L1 -1752 5832 4407 243 0 0 0 chr2 144024489 144024516 -106663338 + (TG)n Simple_repeat Simple_repeat 2 28 0 8838 238 34 16 chr2 144024516 144026412 -106661442 - L1PA13 LINE L1 -3177 4407 2445 180 0 0 0 chr2 144026412 144026432 -106661422 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8838 238 34 16 chr2 144026432 144026585 -106661269 - L1PA13 LINE L1 -5139 2445 2296 241 315 0 23 chr2 144027345 144027474 -106660380 - L1PA13 LINE L1 -5268 2306 2085 375 60 0 0 chr2 144027476 144027526 -106660328 + (CTGTG)n Simple_repeat Simple_repeat 3 52 0 1366 324 27 31 chr2 144027598 144028187 -106659667 - L1PA13 LINE L1 -6200 1374 788 282 299 23 0 chr2 144029607 144029694 -106658160 + L2 LINE L2 3225 3313 0 2161 183 0 10 chr2 144029730 144030118 -106657736 - MLT1B LTR MaLR 0 390 7 2086 125 0 0 chr2 144030292 144030604 -106657250 + AluSx SINE Alu 1 312 0 186 270 56 34 chr2 144031224 144031313 -106656541 + L3 LINE CR1 568 658 -919 277 150 0 17 chr2 144031407 144031467 -106656387 - MER97b DNA MER1_type? -950 103 45 1952 144 0 10 chr2 144031607 144031919 -106655935 - AluSx SINE Alu -1 311 3 21 0 0 0 chr2 144031999 144032020 -106655834 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 144032807 144032844 -106655010 + AT_rich Low_complexity Low_complexity 1 37 0 267 384 27 11 chr2 144033920 144034105 -106653749 - MIR SINE MIR -61 201 14 1182 162 0 0 chr2 144036225 144036404 -106651450 + AluJb SINE Alu 115 293 -19 24 53 0 0 chr2 144036676 144036714 -106651140 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 144036810 144036832 -106651022 + AT_rich Low_complexity Low_complexity 1 22 0 747 341 103 0 chr2 144038787 144039136 -106648718 - MER110 LTR ERV1 -74 417 33 1046 246 4 54 chr2 144039699 144039975 -106647879 + MER45C DNA AcHobo 4 265 -688 18239 143 48 42 chr2 144040547 144043947 -106643907 - L1M1 LINE L1 -4125 3440 18 234 0 0 0 chr2 144044169 144044195 -106643659 + (A)n Simple_repeat Simple_repeat 1 26 0 1111 164 0 6 chr2 144044246 144044417 -106643437 - AluJo SINE Alu -136 176 7 743 275 79 18 chr2 144044821 144045214 -106642640 - L1MEd LINE L1 -4862 1257 841 946 276 77 63 chr2 144045228 144045706 -106642148 + L2 LINE L2 2824 3308 -5 228 224 71 0 chr2 144045744 144045829 -106642025 - L1MEd LINE L1 -5273 846 756 359 248 201 13 chr2 144045961 144046110 -106641744 - L1MEd LINE L1 -5447 672 496 1536 245 32 36 chr2 144046484 144046953 -106640901 - MLT1C LTR MaLR 0 467 1 566 281 50 66 chr2 144046956 144047198 -106640656 - Charlie8 DNA MER1_type -2178 239 2 405 330 50 16 chr2 144049042 144049224 -106638630 + MIR3 SINE MIR 21 208 0 * 504 333 13 19 chr2 144049219 144049375 -106638479 - MIR3 SINE MIR -42 166 12 24 32 0 0 chr2 144050978 144051009 -106636845 + AT_rich Low_complexity Low_complexity 1 31 0 2494 40 0 0 chr2 144051009 144051309 -106636545 - L1PA3 LINE L1 -3 6152 5853 23 78 0 0 chr2 144051487 144051538 -106636316 + AT_rich Low_complexity Low_complexity 1 51 0 215 309 87 60 chr2 144052839 144052988 -106634866 + MER5A DNA MER1_type 1 153 -36 433 248 34 107 chr2 144053008 144053242 -106634612 + MIR SINE MIR 19 235 -27 311 211 95 53 chr2 144053254 144053349 -106634505 - MIR SINE MIR -3 259 161 227 283 65 22 chr2 144053823 144053915 -106633939 - MIR SINE MIR -132 130 35 283 216 36 90 chr2 144054603 144054714 -106633140 + MIR SINE MIR 49 153 -109 2249 89 0 71 chr2 144054745 144055081 -106632773 - AluSx SINE Alu 0 312 1 24 53 0 0 chr2 144055755 144055793 -106632061 + AT_rich Low_complexity Low_complexity 1 38 0 1463 176 3 108 chr2 144056177 144056512 -106631342 - AluJo SINE Alu -2 300 1 827 277 6 0 chr2 144056512 144056689 -106631165 + MER5A DNA MER1_type 12 189 0 23 33 0 0 chr2 144057578 144057608 -106630246 + AT_rich Low_complexity Low_complexity 1 30 0 2201 155 35 30 chr2 144059041 144059467 -106628387 + MSTB1 LTR MaLR 5 432 0 1825 148 3 58 chr2 144059633 144059963 -106627891 - AluSx SINE Alu 0 312 1 3709 248 35 25 chr2 144060753 144061883 -106625971 - L1MC4a LINE L1 -6 7802 6661 531 224 12 6 chr2 144062492 144062657 -106625197 + CT-rich Low_complexity Low_complexity 2 167 0 299 344 64 8 chr2 144063301 144063426 -106624428 - L2 LINE L2 0 3272 3141 1347 230 10 44 chr2 144063527 144063910 -106623944 - MLT1A2 LTR MaLR -4 370 1 21 57 0 0 chr2 144064046 144064081 -106623773 + AT_rich Low_complexity Low_complexity 1 35 0 668 213 7 0 chr2 144064354 144064490 -106623364 + L1MCa LINE L1 1 137 -6289 2265 223 23 19 chr2 144064555 144065170 -106622684 + L1M4 LINE L1 3371 3987 -2159 524 249 130 36 chr2 144065342 144065619 -106622235 + L2 LINE L2 2124 2426 -888 240 150 150 17 chr2 144065711 144065771 -106622083 + MER110 LTR ERV1 3 70 -421 2261 215 92 8 chr2 144065776 144065800 -106622054 - MER99 DNA DNA -2 826 805 405 0 0 0 chr2 144065800 144065845 -106622009 + (TG)n Simple_repeat Simple_repeat 2 46 0 2261 215 92 8 chr2 144065845 144066405 -106621449 - MER99 DNA DNA -23 805 193 2218 114 0 7 chr2 144066973 144067280 -106620574 + AluSg SINE Alu 5 309 -1 334 247 26 0 chr2 144067280 144067357 -106620497 - MER99 DNA DNA -748 80 2 1120 268 91 20 chr2 144067361 144067768 -106620086 + MER110 LTR ERV1 36 471 -20 394 271 47 0 chr2 144067808 144067915 -106619939 - MIR SINE MIR -95 167 56 288 362 66 37 chr2 144067926 144068197 -106619657 + L2 LINE L2 2472 2750 -564 243 382 47 39 chr2 144068318 144068572 -106619282 + L2 LINE L2 2823 3078 -194 2439 141 34 21 chr2 144068726 144069151 -106618703 + MSTB1 LTR MaLR 1 374 -1 305 306 53 24 chr2 144069351 144069521 -106618333 - MER5B DNA MER1_type 0 178 4 405 0 0 0 chr2 144070109 144070154 -106617700 + (CA)n Simple_repeat Simple_repeat 2 46 0 294 29 0 0 chr2 144072739 144072766 -106615088 + (CA)n Simple_repeat Simple_repeat 1 62 0 294 29 0 0 chr2 144072766 144072801 -106615053 + (CA)n Simple_repeat Simple_repeat 2 36 0 463 275 114 21 chr2 144074968 144075161 -106612693 + MIR SINE MIR 30 240 -22 1367 191 113 29 chr2 144076350 144076696 -106611158 - THE1C LTR MaLR 0 375 1 9322 141 28 36 chr2 144076697 144078288 -106609566 - THE1C-int LTR MaLR -1 1579 3 1820 139 57 38 chr2 144078290 144078658 -106609196 - THE1C LTR MaLR 0 375 1 372 257 37 0 chr2 144079330 144079439 -106608415 - MER112 DNA MER1_type -143 117 5 548 235 0 9 chr2 144079747 144079862 -106607992 - MER81 DNA DNA 0 114 1 2306 197 5 0 chr2 144080859 144081275 -106606579 + MER47B DNA MER2_type 1 418 0 303 28 0 0 chr2 144084285 144084321 -106603533 + (TC)n Simple_repeat Simple_repeat 1 36 0 270 0 0 0 chr2 144084320 144084350 -106603504 + (CA)n Simple_repeat Simple_repeat 1 30 0 * 845 203 68 21 chr2 144084519 144084756 -106603098 - L1MD3 LINE L1 -18 7977 7730 321 344 28 42 chr2 144084802 144085050 -106602804 + MIR SINE MIR 2 254 -8 3547 177 48 8 chr2 144088047 144088753 -106599101 + MER50 LTR ERV1 1 734 0 1508 180 41 51 chr2 144088832 144089226 -106598628 - MLT1B LTR MaLR 0 390 1 251 200 192 32 chr2 144089345 144089470 -106598384 - MLT1C LTR MaLR -123 344 200 2692 146 15 51 chr2 144090249 144090861 -106596993 + MER4E LTR ERV1 1 779 0 764 250 141 41 chr2 144091390 144091730 -106596124 + MLT1C LTR MaLR 91 464 -3 25 0 0 0 chr2 144093877 144093902 -106593952 + AT_rich Low_complexity Low_complexity 1 25 0 368 276 54 59 chr2 144094246 144094449 -106593405 + L1ME4a LINE L1 5719 5920 -201 1822 131 3 66 chr2 144095002 144095307 -106592547 - AluSx SINE Alu -26 286 1 25 31 0 0 chr2 144095309 144095341 -106592513 + AT_rich Low_complexity Low_complexity 1 32 0 735 283 165 37 chr2 144095640 144096022 -106591832 - LTR33 LTR ERVL -90 431 1 26 30 0 0 chr2 144098085 144098118 -106589736 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr2 144098507 144098537 -106589317 + AT_rich Low_complexity Low_complexity 1 30 0 2037 184 16 5 chr2 144099579 144099965 -106587889 + MLT1B LTR MaLR 1 390 0 2150 192 3 8 chr2 144100528 144100914 -106586940 - MSTB LTR MaLR -6 420 37 5757 202 73 50 chr2 144100928 144102470 -106585384 - MSTB-int LTR MaLR 0 1580 3 2265 148 22 65 chr2 144102472 144102917 -106584937 - MSTB LTR MaLR 0 426 1 852 137 72 7 chr2 144103156 144103309 -106584545 - MER34 LTR ERV1 0 542 380 872 258 44 4 chr2 144103371 144103623 -106584231 - MER34 LTR ERV1 -280 262 1 22 35 0 0 chr2 144103878 144103907 -106583947 + AT_rich Low_complexity Low_complexity 1 29 0 2130 179 59 12 chr2 144104631 144105040 -106582814 + MSTA LTR MaLR 1 428 0 519 253 32 6 chr2 144105094 144105252 -106582602 + MER103 DNA DNA 3 164 -2 868 234 10 5 chr2 144105687 144105892 -106581962 + MER96B DNA MER1_type? 18 223 -194 24 0 0 0 chr2 144106025 144106049 -106581805 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 144107506 144107527 -106580327 + AT_rich Low_complexity Low_complexity 1 21 0 2402 74 3 3 chr2 144108204 144108513 -106579341 + AluY SINE Alu 1 309 -2 517 236 0 31 chr2 144109136 144109263 -106578591 - MLT1B LTR MaLR -45 345 223 879 229 150 23 chr2 144109309 144109470 -106578384 + MLT1B LTR MaLR 1 140 -250 324 0 0 0 chr2 144109470 144109506 -106578348 + (TC)n Simple_repeat Simple_repeat 2 37 0 879 229 150 23 chr2 144109506 144109650 -106578204 + MLT1B LTR MaLR 140 345 -45 225 0 0 0 chr2 144109761 144109786 -106578068 + (A)n Simple_repeat Simple_repeat 1 25 0 900 240 96 14 chr2 144110686 144110978 -106576876 + HsTC2 DNA Tc2 3 318 -1580 1806 262 76 48 chr2 144111375 144113547 -106574307 + L1MEc LINE L1 1833 4092 -2123 2054 134 16 32 chr2 144113656 144114036 -106573818 - THE1C LTR MaLR -1 374 1 581 296 66 40 chr2 144114080 144114306 -106573548 + MIR SINE MIR 30 261 -1 282 316 88 7 chr2 144114770 144114906 -106572948 - MIR SINE MIR -84 178 32 25 0 0 0 chr2 144115405 144115430 -106572424 + AT_rich Low_complexity Low_complexity 1 25 0 229 347 66 0 chr2 144115641 144115762 -106572092 - L1MC/D LINE L1 -2196 5612 5484 1326 191 0 4 chr2 144115809 144116055 -106571799 - AluJo SINE Alu -27 285 41 626 233 86 0 chr2 144116255 144116418 -106571436 - MER97a DNA MER1_type? -717 177 1 339 348 104 30 chr2 144116834 144117303 -106570551 - L1MC/D LINE L1 -758 5388 4885 1348 215 33 63 chr2 144117700 144118095 -106569759 + L1MEc LINE L1 4091 4473 -1742 * 4230 184 56 17 chr2 144118088 144119055 -106568799 + L1MB3 LINE L1 4700 5738 -514 1967 153 3 3 chr2 144119055 144119355 -106568499 + AluSc SINE Alu 1 300 -9 4230 184 56 17 chr2 144119355 144119888 -106567966 + L1MB3 LINE L1 5738 6249 -3 * 13962 210 13 9 chr2 144119877 144120775 -106567079 + L1PB1 LINE L1 2246 3139 -3715 507 45 0 0 chr2 144120775 144120841 -106567013 + (TC)n Simple_repeat Simple_repeat 2 67 0 288 0 0 0 chr2 144120840 144120872 -106566982 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 13962 210 13 9 chr2 144120841 144122938 -106564916 + L1PB1 LINE L1 3139 5235 -1619 2013 144 33 28 chr2 144122938 144123299 -106564555 + THE1B LTR MaLR 1 363 -1 13962 210 13 9 chr2 144123299 144124565 -106563289 + L1PB1 LINE L1 5235 6494 -360 429 188 0 0 chr2 144124571 144124656 -106563198 + (TG)n Simple_repeat Simple_repeat 2 86 0 210 171 0 0 chr2 144124656 144124697 -106563157 + (CATA)n Simple_repeat Simple_repeat 2 42 0 2533 99 3 0 chr2 144124702 144125064 -106562790 + L1PB1 LINE L1 6492 6854 0 573 321 58 7 chr2 144125083 144125357 -106562497 + MLT1F1 LTR MaLR 18 305 -262 235 255 128 67 chr2 144125395 144125544 -106562310 + MLT1F1 LTR MaLR 436 593 0 262 363 144 15 chr2 144125550 144125751 -106562103 + MIR SINE MIR 20 246 -16 22 0 0 0 chr2 144126119 144126141 -106561713 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 144127870 144127892 -106559962 + AT_rich Low_complexity Low_complexity 1 22 0 2208 110 3 0 chr2 144129173 144129474 -106558380 + AluSx SINE Alu 3 304 -8 204 232 14 0 chr2 144130342 144130411 -106557443 + (TA)n Simple_repeat Simple_repeat 1 70 0 503 308 143 32 chr2 144130535 144131009 -106556845 - MLT1L LTR MaLR -2 613 87 1658 210 5 25 chr2 144131059 144131426 -106556428 - MLT1A1 LTR MaLR -5 360 1 662 266 73 39 chr2 144131463 144131906 -106555948 - LTR33 LTR ERVL -1 520 1 395 231 149 62 chr2 144132062 144132443 -106555411 - L1MC/D LINE L1 -485 5636 5256 461 279 103 104 chr2 144132466 144133078 -106554776 - L1MC/D LINE L1 -920 5226 4614 2524 53 0 10 chr2 144133078 144133382 -106554472 + AluY SINE Alu 1 301 -10 461 279 103 104 chr2 144133382 144133785 -106554069 - L1MC/D LINE L1 -1532 4614 4212 489 73 0 0 chr2 144133792 144133860 -106553994 - LTR1B LTR ERV1 -2 824 757 3269 157 16 16 chr2 144133861 144134435 -106553419 - LTR1B LTR ERV1 -252 574 1 294 29 0 0 chr2 144134505 144134540 -106553314 + (TC)n Simple_repeat Simple_repeat 2 36 0 22 35 0 0 chr2 144134646 144134675 -106553179 + AT_rich Low_complexity Low_complexity 1 29 0 204 125 0 0 chr2 144134788 144134820 -106553034 + (CAT)n Simple_repeat Simple_repeat 1 32 0 699 142 35 0 chr2 144134842 144134955 -106552899 + FLAM_C SINE Alu 8 124 -19 272 299 31 0 chr2 144134997 144135094 -106552760 - MIR SINE MIR -38 224 125 196 250 21 0 chr2 144135939 144135987 -106551867 + L2 LINE L2 3262 3310 -3 1999 100 44 0 chr2 144136933 144137267 -106550587 + AluSx SINE Alu 1 346 0 243 219 14 0 chr2 144138346 144138419 -106549435 + L1MA7 LINE L1 6218 6291 0 744 262 74 22 chr2 144139063 144139467 -106548387 + L1MC4 LINE L1 7217 7641 -401 183 220 0 0 chr2 144139536 144139586 -106548268 + CT-rich Low_complexity Low_complexity 2 51 0 302 269 142 7 chr2 144139603 144139744 -106548110 + L1MC4 LINE L1 7680 7839 -203 * 898 234 47 71 chr2 144139742 144140037 -106547817 + L1MD2 LINE L1 4889 5173 -973 1750 169 7 7 chr2 144140037 144140344 -106547510 + AluSx SINE Alu 1 307 -5 898 234 47 71 chr2 144140344 144140472 -106547382 + L1MD2 LINE L1 5173 5302 -844 448 287 71 39 chr2 144140482 144141330 -106546524 + L1MD2 LINE L1 5354 6261 -98 1920 83 0 0 chr2 144141330 144141570 -106546284 + AluSg/x SINE Alu 66 305 -7 448 287 71 39 chr2 144141570 144141656 -106546198 + L1MD2 LINE L1 6261 6343 -16 207 0 0 0 chr2 144141772 144141795 -106546059 + (CA)n Simple_repeat Simple_repeat 1 23 0 246 355 84 6 chr2 144141873 144142208 -106545646 + L1ME1 LINE L1 4085 4445 -1701 23 0 0 0 chr2 144142246 144142269 -106545585 + AT_rich Low_complexity Low_complexity 1 23 0 1632 218 65 11 chr2 144142297 144142651 -106545203 + MLT1A2 LTR MaLR 2 374 0 359 322 55 55 chr2 144142702 144142959 -106544895 + L1ME1 LINE L1 4601 4856 -1290 3778 157 8 80 chr2 144142959 144143805 -106544049 + LTR1 LTR ERV1 1 785 0 359 322 55 55 chr2 144143805 144144068 -106543786 + L1ME1 LINE L1 4856 5127 -1019 261 188 35 12 chr2 144144159 144144244 -106543610 + L1ME1 LINE L1 5254 5340 -2468 * 1507 268 52 8 chr2 144144240 144144759 -106543095 + L1ME1 LINE L1 5622 6163 -3 271 150 67 0 chr2 144144922 144144982 -106542872 - L1ME LINE L1 -474 5688 5625 188 366 146 0 chr2 144145160 144145324 -106542530 - MIR SINE MIR -55 207 20 246 280 16 86 chr2 144145584 144145770 -106542084 + MER110A LTR ERV1 272 444 -24 787 144 7 43 chr2 144146959 144147098 -106540756 + AluJo SINE Alu 3 136 -176 1724 175 7 13 chr2 144147098 144147407 -106540447 + AluJb SINE Alu 1 307 -5 483 314 36 81 chr2 144147415 144147720 -106540134 + MER110-int LTR ERV1 3772 4046 -601 2893 97 54 7 chr2 144147720 144148144 -106539710 - MLT2A1 LTR ERVL 0 444 1 483 314 36 81 chr2 144148144 144148358 -106539496 + MER110-int LTR ERV1 4046 4268 -379 371 190 35 90 chr2 144148401 144148528 -106539326 - L1MC/D LINE L1 -582 5584 5469 251 169 62 0 chr2 144148756 144148821 -106539033 - L1MC/D LINE L1 -913 5431 5363 3462 176 25 19 chr2 144148822 144149457 -106538397 - MER44D DNA MER2_type -1 604 94 413 257 115 0 chr2 144149457 144149605 -106538249 - L1MC/D LINE L1 -1241 4905 4741 245 29 0 29 chr2 144150557 144150592 -106537262 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 272 237 17 0 chr2 144151123 144151182 -106536672 + CT-rich Low_complexity Low_complexity 4 63 0 308 94 19 0 chr2 144151360 144151413 -106536441 + (CA)n Simple_repeat Simple_repeat 1 54 0 2296 75 0 0 chr2 144152573 144152853 -106535001 + AluSx SINE Alu 1 280 -32 307 0 47 0 chr2 144152856 144152899 -106534955 + (TAA)n Simple_repeat Simple_repeat 2 46 0 2012 148 19 38 chr2 144153345 144153716 -106534138 + THE1B LTR MaLR 1 364 0 475 234 112 43 chr2 144153879 144154067 -106533787 + L2 LINE L2 3113 3313 0 308 250 23 11 chr2 144154545 144154633 -106533221 - MLT1I LTR MaLR -3 406 318 251 252 110 47 chr2 144154742 144154869 -106532985 - MLT1J2 LTR MaLR -238 212 78 1082 78 0 0 chr2 144155008 144155136 -106532718 + AluSc SINE Alu 6 133 -176 1575 158 0 23 chr2 144155136 144155395 -106532459 + AluSq SINE Alu 1 253 -60 795 303 68 33 chr2 144155692 144156029 -106531825 - LTR16A LTR ERVL 0 450 102 46 54 0 0 chr2 144156173 144156247 -106531607 + AT_rich Low_complexity Low_complexity 1 74 0 200 100 25 0 chr2 144157134 144157174 -106530680 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1882 128 0 31 chr2 144157899 144158222 -106529632 - AluSx SINE Alu 0 316 3 456 67 0 0 chr2 144158240 144158300 -106529554 + (TG)n Simple_repeat Simple_repeat 2 61 0 187 362 0 0 chr2 144158404 144158462 -106529392 - L2 LINE L2 -8 3264 3207 21 0 0 0 chr2 144158719 144158740 -106529114 + AT_rich Low_complexity Low_complexity 1 21 0 298 306 111 28 chr2 144159993 144160137 -106527717 + MIR3 SINE MIR 43 198 -10 180 77 0 0 chr2 144160159 144160185 -106527669 + (ATTG)n Simple_repeat Simple_repeat 1 26 0 1627 161 4 25 chr2 144160196 144160476 -106527378 - AluJo SINE Alu -38 274 1 590 285 105 53 chr2 144160921 144161244 -106526610 - MER102b DNA MER1_type -1 340 1 2235 107 0 3 chr2 144161647 144161945 -106525909 - AluSg SINE Alu -13 297 1 1576 213 0 22 chr2 144162166 144162481 -106525373 - AluJb SINE Alu -1 311 4 1414 254 91 35 chr2 144163288 144163772 -106524082 - MLT1G LTR MaLR -2 588 78 246 371 27 43 chr2 144163792 144164048 -106523806 + L2 LINE L2 1695 1946 -1368 206 254 17 34 chr2 144164050 144164109 -106523745 - MIR SINE MIR 0 262 205 27 62 0 0 chr2 144164148 144164196 -106523658 + AT_rich Low_complexity Low_complexity 1 48 0 2189 183 15 25 chr2 144164408 144164813 -106523041 + MSTB LTR MaLR 26 426 0 8076 208 21 7 chr2 144164813 144166440 -106521414 + MSTB-int LTR MaLR 1 1651 0 2315 158 48 36 chr2 144166442 144166861 -106520993 + MSTB LTR MaLR 3 426 0 10579 209 65 9 chr2 144167141 144169445 -106518409 + L1M2a LINE L1 1 2440 -4728 1338 282 67 21 chr2 144369461 144369603 -106318251 + L1M4c LINE L1 1183 1317 -5067 2370 53 0 3 chr2 144369603 144369915 -106317939 + AluY SINE Alu 1 311 0 1338 282 67 21 chr2 144369915 144370399 -106317455 + L1M4c LINE L1 1317 1839 -4545 1749 193 0 3 chr2 144370557 144370847 -106317007 + AluJo SINE Alu 17 305 -7 355 266 29 87 chr2 144370849 144371090 -106316764 + L1M4c LINE L1 1910 2136 -4427 746 257 51 3 chr2 144371179 144371527 -106316327 + L1M4c LINE L1 3372 3736 -2646 * 914 166 6 0 chr2 144371494 144371675 -106316179 + L1MB8 LINE L1 6023 6204 -210 2485 90 0 0 chr2 144371675 144371986 -106315868 + AluSq SINE Alu 1 311 -2 942 172 18 41 chr2 144372035 144372256 -106315598 + L1MB8 LINE L1 6190 6405 -9 547 259 127 69 chr2 144372729 144373306 -106314548 - L2 LINE L2 0 3313 2690 1675 114 14 4 chr2 144373306 144373587 -106314267 + L1MA4 LINE L1 6002 6285 -15 547 259 127 69 chr2 144373587 144373643 -106314211 - L2 LINE L2 -623 2690 2639 1311 193 82 97 chr2 144373643 144374109 -106313745 + MLT1C LTR MaLR 1 459 -8 221 345 0 0 chr2 144374179 144374263 -106313591 - L2 LINE L2 -764 2550 2467 2032 143 13 0 chr2 144374494 144374802 -106313052 + AluSq SINE Alu 1 312 -1 747 193 0 17 chr2 144374808 144374989 -106312865 + GA-rich Low_complexity Low_complexity 1 178 0 624 234 91 67 chr2 144375132 144375474 -106312380 - L1MC4a LINE L1 -1761 6047 5698 633 241 43 36 chr2 144375474 144375702 -106312152 - MER58 DNA MER1_type 0 2420 2195 2191 93 21 4 chr2 144375702 144376027 -106311827 - AluSq SINE Alu 0 330 1 633 241 43 36 chr2 144376027 144376128 -106311726 - MER58 DNA MER1_type -225 2195 3 560 272 119 31 chr2 144376139 144376433 -106311421 - L1MC4a LINE L1 -2145 5663 5344 273 340 62 9 chr2 144376576 144377014 -106310840 - L1MC4a LINE L1 -984 5162 4702 1870 147 23 85 chr2 144377044 144377433 -106310421 - MLT1A1 LTR MaLR 0 365 1 3382 194 71 32 chr2 144377572 144378644 -106309210 - L1MB5 LINE L1 -8 6166 5003 2042 106 46 7 chr2 144378644 144378926 -106308928 - AluSq SINE Alu -20 293 1 3382 194 71 32 chr2 144378926 144379589 -106308265 - L1MB5 LINE L1 -1171 5003 4367 1308 128 186 21 chr2 144380058 144380217 -106307637 - AluJb SINE Alu 0 327 196 2337 77 30 0 chr2 144380217 144380516 -106307338 - AluY SINE Alu -3 308 1 1308 128 186 21 chr2 144380516 144380643 -106307211 - AluJb SINE Alu -131 196 1 926 266 39 0 chr2 144381152 144381408 -106306446 - L2 LINE L2 0 3313 3048 451 237 183 67 chr2 144381526 144381898 -106305956 - MLT1H LTR MaLR -2 547 133 1265 217 98 17 chr2 144381916 144382262 -106305592 + MLT1A2 LTR MaLR 1 374 0 396 155 0 0 chr2 144382314 144382385 -106305469 + GA-rich Low_complexity Low_complexity 2 72 0 5889 174 35 32 chr2 144382518 144384596 -106303258 - L1PA13 LINE L1 -5 6158 4088 217 229 21 0 chr2 144384875 144384923 -106302931 - L2 LINE L2 -86 3227 3179 241 168 218 10 chr2 144385580 144385681 -106302173 - LTR16A1 LTR ERVL 0 457 336 1477 175 23 96 chr2 144385723 144386117 -106301737 - MLT1A1 LTR MaLR 0 365 1 626 230 77 45 chr2 144386121 144386343 -106301511 - LTR16A1 LTR ERVL -224 233 5 551 298 47 12 chr2 144386640 144386811 -106301043 - L2 LINE L2 -7 3265 3089 252 0 0 0 chr2 144387072 144387107 -106300747 + (CA)n Simple_repeat Simple_repeat 1 63 0 252 0 0 0 chr2 144387107 144387135 -106300719 + (CA)n Simple_repeat Simple_repeat 2 29 0 313 398 29 25 chr2 144387525 144387769 -106300085 + L1M4 LINE L1 4102 4346 -1800 2028 182 20 0 chr2 144387818 144388176 -106299678 + MLT1A1 LTR MaLR 1 365 0 1011 227 29 17 chr2 144388239 144388477 -106299377 + MIR SINE MIR 19 259 -3 3202 75 41 7 chr2 144388477 144388914 -106298940 - MLT2A2 LTR ERVL 0 453 2 621 254 104 93 chr2 144390075 144390536 -106297318 - MLT1J LTR MaLR -45 466 1 2430 243 140 15 chr2 144390631 144391346 -106296508 + L1M4b LINE L1 2 805 -6054 546 140 131 0 chr2 144391363 144391470 -106296384 + L1M4b LINE L1 854 974 -5885 * 10832 187 45 42 chr2 144391469 144392101 -106295753 + L1PA16 LINE L1 18 646 -5756 200 59 29 0 chr2 144392101 144392135 -106295719 + (TAAAA)n Simple_repeat Simple_repeat 4 38 0 10832 187 45 42 chr2 144392135 144393132 -106294722 + L1PA16 LINE L1 646 1638 -4764 2063 127 10 3 chr2 144393132 144393440 -106294414 + AluSg SINE Alu 1 310 0 10832 187 45 42 chr2 144393440 144394760 -106293094 + L1PA16 LINE L1 1638 2952 -3450 1913 90 0 0 chr2 144394760 144394993 -106292861 - AluSx SINE Alu -20 292 60 10832 187 45 42 chr2 144394993 144396736 -106291118 + L1PA16 LINE L1 2952 4687 -1715 1553 184 0 15 chr2 144396736 144397007 -106290847 + AluJb SINE Alu 30 296 -16 10832 187 45 42 chr2 144397007 144397087 -106290767 + L1PA16 LINE L1 4687 4765 -1637 1850 161 10 0 chr2 144397087 144397386 -106290468 + AluJb SINE Alu 1 302 -10 10832 187 45 42 chr2 144397386 144398915 -106288939 + L1PA16 LINE L1 4765 6353 -49 225 0 0 0 chr2 144398915 144398940 -106288914 + (CA)n Simple_repeat Simple_repeat 2 26 0 10832 187 45 42 chr2 144398940 144398982 -106288872 + L1PA16 LINE L1 6353 6393 -9 24 0 0 0 chr2 144398984 144399008 -106288846 + AT_rich Low_complexity Low_complexity 1 24 0 4824 160 6 25 chr2 144399008 144399984 -106287870 + L1MB3 LINE L1 5219 6181 -2 2657 184 68 36 chr2 144400156 144400323 -106287531 + L1M4b LINE L1 982 1142 -5713 2270 96 0 10 chr2 144400323 144400624 -106287230 + AluSq SINE Alu 1 298 -15 2657 184 68 36 chr2 144400624 144401069 -106286785 + L1M4b LINE L1 1142 1617 -5238 1946 143 3 32 chr2 144401069 144401384 -106286470 - AluSx SINE Alu -6 306 1 2657 184 68 36 chr2 144401384 144401504 -106286350 + L1M4b LINE L1 1617 1732 -5123 437 133 0 56 chr2 144401616 144401706 -106286148 - AluS SINE Alu -228 85 1 277 209 44 88 chr2 144401715 144401806 -106286048 + L2 LINE L2 3227 3313 0 431 237 79 0 chr2 144401812 144401951 -106285903 + L3 LINE CR1 1286 1435 -142 273 271 116 77 chr2 144401975 144402130 -106285724 + MER5B DNA MER1_type 4 164 -14 650 282 141 28 chr2 144402142 144402659 -106285195 - L2 LINE L2 0 3313 2733 329 261 146 23 chr2 144403393 144403523 -106284331 + MIR3 SINE MIR 58 203 -5 21 57 0 0 chr2 144404327 144404362 -106283492 + AT_rich Low_complexity Low_complexity 1 35 0 1145 303 114 35 chr2 144404407 144405420 -106282434 - L2 LINE L2 0 3313 2211 1282 185 0 10 chr2 144405803 144406008 -106281846 - AluJb SINE Alu -25 287 85 259 220 99 66 chr2 144406161 144406252 -106281602 - MIR3 SINE MIR -30 178 85 238 284 11 105 chr2 144406344 144406439 -106281415 - MER5A DNA MER1_type -51 138 53 190 263 0 0 chr2 144406405 144406443 -106281411 + MER5B DNA MER1_type 103 140 -38 * 678 259 66 63 chr2 144407073 144407591 -106280263 + MLT1E LTR MaLR 1 520 -134 386 279 107 7 chr2 144408526 144408666 -106279188 - MIR3 SINE MIR -6 202 49 3750 69 19 0 chr2 144408863 144409385 -106278469 - L1PA7 LINE L1 -1681 4465 3934 * 6379 66 14 2 chr2 144409383 144411022 -106276832 + L1PA7 LINE L1 4472 6128 -26 203 156 0 0 chr2 144411023 144411055 -106276799 + (TATG)n Simple_repeat Simple_repeat 3 34 0 184 250 50 0 chr2 144411184 144411224 -106276630 - MIR SINE MIR -57 151 110 511 279 33 5 chr2 144411502 144411674 -106276180 + MIR SINE MIR 17 193 -63 21 0 0 0 chr2 144412309 144412330 -106275524 + AT_rich Low_complexity Low_complexity 1 21 0 2041 106 0 0 chr2 144415459 144415723 -106272131 + AluSg SINE Alu 17 280 -30 243 241 0 17 chr2 144415799 144415857 -106271997 + CT-rich Low_complexity Low_complexity 2 58 0 572 135 87 0 chr2 144418293 144418397 -106269457 - MLT1D LTR MaLR -42 463 351 21 0 0 0 chr2 144418493 144418514 -106269340 + AT_rich Low_complexity Low_complexity 1 21 0 2127 138 0 0 chr2 144418514 144418812 -106269042 - AluSx SINE Alu -12 300 3 210 321 75 75 chr2 144420362 144420496 -106267358 - L2 LINE L2 -5 3267 3134 29 47 0 0 chr2 144420987 144421030 -106266824 + AT_rich Low_complexity Low_complexity 1 43 0 1659 189 0 7 chr2 144421479 144421770 -106266084 - AluJo SINE Alu -23 289 1 216 307 127 40 chr2 144422959 144423109 -106264745 - L3b LINE CR1 -73 1510 1348 2135 129 3 0 chr2 144423910 144424213 -106263641 + AluSx SINE Alu 1 304 -8 625 193 9 0 chr2 144424218 144424332 -106263522 - FLAM_C SINE Alu -16 117 3 2503 60 0 13 chr2 144424989 144425303 -106262551 + AluY SINE Alu 1 310 -1 37 52 0 0 chr2 144425307 144425365 -106262489 + AT_rich Low_complexity Low_complexity 1 58 0 313 108 12 36 chr2 144425368 144425451 -106262403 + (TTTAA)n Simple_repeat Simple_repeat 1 81 0 28 29 0 0 chr2 144425451 144425486 -106262368 + AT_rich Low_complexity Low_complexity 1 35 0 229 356 87 19 chr2 144425769 144425873 -106261981 + L2 LINE L2 3158 3268 -4 2451 64 0 6 chr2 144425951 144426264 -106261590 - AluY SINE Alu 0 311 1 24 0 0 0 chr2 144426428 144426452 -106261402 + AT_rich Low_complexity Low_complexity 1 24 0 1803 114 73 0 chr2 144426452 144426725 -106261129 - AluJb SINE Alu -19 293 1 2321 95 0 0 chr2 144428971 144429267 -106258587 + AluSx SINE Alu 1 296 -16 1603 174 33 7 chr2 144430728 144431034 -106256820 + AluJo SINE Alu 1 313 0 24 0 0 0 chr2 144432779 144432803 -106255051 + AT_rich Low_complexity Low_complexity 1 24 0 1936 128 0 45 chr2 144433851 144434163 -106253691 - AluJb SINE Alu -12 300 3 2142 105 3 0 chr2 144435005 144435311 -106252543 - AluY SINE Alu -4 307 1 21 0 0 0 chr2 144435357 144435378 -106252476 + AT_rich Low_complexity Low_complexity 1 21 0 185 277 79 59 chr2 144437728 144437829 -106250025 - MIR3 SINE MIR -52 156 54 214 239 169 0 chr2 144437965 144438036 -106249818 + MIR SINE MIR 2 84 -178 330 264 9 28 chr2 144438063 144438169 -106249685 + MIR SINE MIR 159 262 0 21 0 0 0 chr2 144440504 144440525 -106247329 + AT_rich Low_complexity Low_complexity 1 21 0 189 300 100 25 chr2 144440566 144440646 -106247208 - L2 LINE L2 -89 3183 3098 180 77 0 0 chr2 144440785 144440811 -106247043 + (TG)n Simple_repeat Simple_repeat 1 26 0 1909 119 0 48 chr2 144440811 144441106 -106246748 - AluSx SINE Alu -31 281 1 1318 149 22 142 chr2 144441203 144441618 -106246236 - L1MC4 LINE L1 0 8042 7678 2261 94 0 0 chr2 144441674 144441962 -106245892 + AluSq SINE Alu 1 288 -25 3617 226 44 57 chr2 144441991 144442371 -106245483 - L1MC4 LINE L1 -365 7677 7294 2129 125 0 0 chr2 144442371 144442667 -106245187 + AluSx SINE Alu 1 296 -16 3617 226 44 57 chr2 144442667 144443173 -106244681 - L1MC4 LINE L1 -748 7294 6783 2039 123 11 0 chr2 144443173 144443511 -106244343 - AluSp SINE Alu 0 341 1 3617 226 44 57 chr2 144443511 144443682 -106244172 - L1MC4 LINE L1 -1259 6783 6629 2216 83 0 3 chr2 144443682 144443972 -106243882 - AluSg SINE Alu -21 289 1 3617 226 44 57 chr2 144443972 144444013 -106243841 - L1MC4 LINE L1 -1413 6629 6589 802 160 0 0 chr2 144445175 144445300 -106242554 + FLAM_C SINE Alu 1 125 -8 1603 126 126 0 chr2 144445318 144445592 -106242262 - MER7A DNA MER2_type -32 314 6 322 109 0 0 chr2 144446751 144446797 -106241057 + tRNA-Arg-CGC tRNA tRNA 1 46 -30 393 376 43 5 chr2 144447265 144447475 -106240379 + L3 LINE CR1 1347 1564 -13 517 162 126 18 chr2 144449552 144449663 -106238191 + FLAM_A SINE Alu 1 123 -10 21 71 0 0 chr2 144449947 144449989 -106237865 + AT_rich Low_complexity Low_complexity 1 42 0 499 196 272 19 chr2 144451787 144451945 -106235909 - LTR67 LTR ERVL 0 557 360 204 297 143 0 chr2 144452082 144452173 -106235681 - L2 LINE L2 -305 2967 2864 2086 130 28 11 chr2 144452321 144452676 -106235178 + MER46B DNA MER2_type 1 236 0 1706 115 111 124 chr2 144452807 144453241 -106234613 - MSTA LTR MaLR 0 428 1 306 349 117 16 chr2 144453471 144453720 -106234134 - L2 LINE L2 -1330 1984 1711 832 231 40 94 chr2 144454222 144454646 -106233208 - L1MC4 LINE L1 -14 8028 7628 274 311 135 45 chr2 144454846 144455158 -106232696 - L2 LINE L2 -942 2372 2033 21 0 0 0 chr2 144455164 144455185 -106232669 + AT_rich Low_complexity Low_complexity 1 21 0 250 287 57 33 chr2 144455677 144455799 -106232055 + L2 LINE L2 3150 3274 -39 757 249 69 20 chr2 144456462 144456767 -106231087 - L1ME4a LINE L1 -7 6114 5795 406 303 25 25 chr2 144456790 144456952 -106230902 - L1ME4a LINE L1 -420 5701 5540 1578 136 6 107 chr2 144458383 144458721 -106229133 - AluJb SINE Alu -8 304 1 359 304 92 37 chr2 144458917 144459266 -106228588 + L1MC4a LINE L1 5595 5962 -1846 318 261 57 0 chr2 144459869 144459957 -106227897 - MIR SINE MIR -27 235 143 357 159 0 0 chr2 144461330 144461393 -106226461 + A-rich Low_complexity Low_complexity 1 63 0 351 302 145 51 chr2 144462970 144463038 -106224816 + HAL1 LINE L1 3 63 -2444 210 37 0 0 chr2 144463038 144463065 -106224789 + (TTG)n Simple_repeat Simple_repeat 2 28 0 351 302 145 51 chr2 144463065 144463251 -106224603 + HAL1 LINE L1 63 281 -2226 1615 102 18 0 chr2 144463253 144463479 -106224375 - MER30 DNA MER1_type 0 230 1 233 362 33 41 chr2 144463500 144463743 -106224111 + HAL1 LINE L1 383 623 -1884 239 266 11 43 chr2 144463784 144463878 -106223976 + L1MC4a LINE L1 6067 6157 -1651 1624 190 14 7 chr2 144464075 144464370 -106223484 - AluJb SINE Alu -15 297 1 634 271 122 54 chr2 144464526 144464951 -106222903 + L1MC5 LINE L1 6528 6981 -827 831 194 51 20 chr2 144465047 144465243 -106222611 - L1MC5 LINE L1 -723 7238 7037 362 228 107 114 chr2 144465243 144465691 -106222163 + L1MC5 LINE L1 7503 7947 -14 * 889 248 169 41 chr2 144465686 144466154 -106221700 + L1ME LINE L1 5265 5794 -368 1432 133 57 51 chr2 144466163 144466478 -106221376 + L1MD2 LINE L1 5656 5972 -387 302 317 57 0 chr2 144466480 144466603 -106221251 + MIR SINE MIR 133 262 0 353 190 7 139 chr2 144467259 144467396 -106220458 + MER58C DNA MER1_type 1 119 -96 1804 138 30 3 chr2 144467397 144467701 -106220153 + AluJo SINE Alu 1 312 0 376 256 8 32 chr2 144467729 144467854 -106220000 + MER58C DNA MER1_type 93 214 -1 180 0 0 0 chr2 144468220 144468240 -106219614 + (A)n Simple_repeat Simple_repeat 1 20 0 2245 117 0 0 chr2 144468506 144468813 -106219041 + AluSx SINE Alu 1 307 -5 2113 113 3 0 chr2 144469485 144469777 -106218077 + AluSq SINE Alu 1 293 -20 798 207 118 0 chr2 144470551 144470720 -106217134 - MER5A DNA MER1_type 0 189 1 368 242 62 23 chr2 144471557 144471685 -106216169 + L1MC4a LINE L1 5307 5439 -2369 610 163 141 60 chr2 144471685 144471869 -106215985 + L1MD3 LINE L1 7797 7995 0 557 251 123 58 chr2 144471872 144472129 -106215725 + L1MC4a LINE L1 5428 5667 -2141 2638 52 0 0 chr2 144472129 144472436 -106215418 - AluY SINE Alu -4 307 1 557 251 123 58 chr2 144472436 144472457 -106215397 + L1MC4a LINE L1 5667 5685 -2123 1404 194 56 4 chr2 144472457 144472725 -106215129 - AluJb SINE Alu -30 282 1 557 251 123 58 chr2 144472725 144472876 -106214978 + L1MC4a LINE L1 5685 5886 -1922 781 209 4 20 chr2 144472929 144473202 -106214652 + AluJb SINE Alu 1 301 -11 2611 193 14 7 chr2 144473834 144474405 -106213449 + L1MB2 LINE L1 4729 5303 -843 234 81 0 0 chr2 144474407 144474444 -106213410 + (A)n Simple_repeat Simple_repeat 1 37 0 262 149 0 0 chr2 144474472 144474519 -106213335 + L1MB2 LINE L1 5320 5366 -814 3124 153 42 30 chr2 144474587 144475190 -106212664 + L1MB2 LINE L1 5359 5968 -203 911 133 73 52 chr2 144475291 144475524 -106212330 + L1MB2 LINE L1 5934 6171 0 1310 228 85 74 chr2 144475534 144476086 -106211768 + L1MC4 LINE L1 7480 8037 -5 399 138 0 0 chr2 144476843 144476908 -106210946 + L1MA5A LINE L1 6023 6087 -210 716 87 94 14 chr2 144476910 144477048 -106210806 + L1MA5A LINE L1 6143 6291 -6 33 56 0 0 chr2 144477058 144477112 -106210742 + AT_rich Low_complexity Low_complexity 1 54 0 350 253 192 25 chr2 144477164 144477362 -106210492 + MARNA DNA Mariner 148 378 -208 2126 170 95 48 chr2 144477621 144478126 -106209728 + L1MC2 LINE L1 18 546 -5880 * 5206 112 20 8 chr2 144478125 144478930 -106208924 - L1PA15 LINE L1 -2 6163 5349 329 208 28 0 chr2 144478922 144478994 -106208860 + L1MC2 LINE L1 542 615 -5811 * 5268 155 138 34 chr2 144478999 144480314 -106207540 + L1MC2 LINE L1 575 2025 -4401 22778 171 18 43 chr2 144480377 144485982 -106201872 + L1PA11 LINE L1 7 6448 -1164 2296 111 0 0 chr2 144485982 144486289 -106201565 + AluY SINE Alu 1 307 -4 22778 171 18 43 chr2 144486289 144487410 -106200444 + L1PA11 LINE L1 6448 7596 -16 5128 129 163 23 chr2 144487412 144488276 -106199578 - Tigger3b DNA MER2_type -1822 1206 465 643 105 73 48 chr2 144488276 144488400 -106199454 - FLAM_C SINE Alu -5 128 2 5128 129 163 23 chr2 144488400 144488413 -106199441 - Tigger3b DNA MER2_type -2563 465 455 1550 212 24 0 chr2 144488413 144488705 -106199149 - AluJo SINE Alu -13 299 1 5128 129 163 23 chr2 144488705 144488879 -106198975 - Tigger3b DNA MER2_type -2573 455 6 847 145 21 0 chr2 144488903 144489048 -106198806 + L1MC2 LINE L1 2073 2220 -4206 234 81 0 0 chr2 144489048 144489085 -106198769 + (CA)n Simple_repeat Simple_repeat 2 38 0 2962 231 55 16 chr2 144489085 144490333 -106197521 + L1MC2 LINE L1 2252 3547 -2879 35616 68 4 7 chr2 144490407 144495855 -106191999 - L1PA5 LINE L1 -102 6052 623 666 93 0 0 chr2 144495855 144495941 -106191913 - L1PA5 LINE L1 -6050 96 11 381 208 62 49 chr2 144496124 144496268 -106191586 + L1MC5 LINE L1 7632 7777 -184 216 97 0 0 chr2 144496392 144496423 -106191431 + (A)n Simple_repeat Simple_repeat 1 31 0 3478 159 82 3 chr2 144496770 144497456 -106190398 - L1MB3 LINE L1 -2 6181 5442 1607 180 11 18 chr2 144497491 144497769 -106190085 + AluJb SINE Alu 10 285 -27 1243 73 58 26 chr2 144498364 144498555 -106189299 + MER30 DNA MER1_type 1 197 -33 225 71 0 0 chr2 144498726 144498754 -106189100 + L1M3 LINE L1 5631 5658 -525 203 261 0 87 chr2 144498761 144498853 -106189001 - MER5A DNA MER1_type -37 152 69 208 283 17 17 chr2 144498881 144498941 -106188913 + MIR3 SINE MIR 146 205 -3 6466 211 82 32 chr2 144499171 144502160 -106185694 + L1MC2 LINE L1 3488 6624 0 21 0 0 0 chr2 144502462 144502483 -106185371 + AT_rich Low_complexity Low_complexity 1 21 0 2444 79 7 0 chr2 144502654 144502957 -106184897 - AluSg SINE Alu -5 305 1 461 301 131 18 chr2 144504108 144504337 -106183517 + MIR SINE MIR 2 256 -6 747 212 0 0 chr2 144505015 144505147 -106182707 - FLAM_C SINE Alu -1 132 1 1852 122 0 45 chr2 144506241 144506529 -106181325 + AluSx SINE Alu 6 280 -32 284 202 141 71 chr2 144507247 144507346 -106180508 - L2 LINE L2 0 3313 3208 196 382 81 8 chr2 144507634 144507757 -106180097 - L2 LINE L2 -15 3257 3126 22 80 0 0 chr2 144508412 144508462 -106179392 + AT_rich Low_complexity Low_complexity 1 50 0 432 306 70 32 chr2 144508856 144509013 -106178841 - L2 LINE L2 -4 3268 3106 297 183 14 0 chr2 144509318 144509389 -106178465 - HsTC2 DNA Tc2 -4 1894 1823 424 286 95 78 chr2 144509448 144509742 -106178112 + L1MEd LINE L1 347 645 -5474 277 330 0 21 chr2 144509832 144509926 -106177928 - MER5A DNA MER1_type -7 182 91 2131 125 7 0 chr2 144510355 144510651 -106177203 + AluSx SINE Alu 5 302 -10 531 300 103 48 chr2 144511630 144511838 -106176016 + L2 LINE L2 2577 2809 -505 2260 71 10 7 chr2 144511838 144512132 -106175722 + AluY SINE Alu 1 295 -16 531 300 103 48 chr2 144512132 144512233 -106175621 + L2 LINE L2 2809 2903 -411 610 272 43 82 chr2 144512265 144512570 -106175284 + L2 LINE L2 3021 3313 0 244 292 28 0 chr2 144512613 144512685 -106175169 - MIR SINE MIR -125 137 64 3529 40 0 5 chr2 144512742 144513172 -106174682 - L1PA4 LINE L1 -3 6152 5725 10262 124 59 17 chr2 144513904 144515523 -106172331 + Tigger1 DNA MER2_type 610 2306 -112 2368 77 0 22 chr2 144515523 144515836 -106172018 - AluY SINE Alu -5 306 1 10262 124 59 17 chr2 144515836 144515940 -106171914 + Tigger1 DNA MER2_type 2306 2404 -14 653 319 60 20 chr2 144515941 144516574 -106171280 + L1ME LINE L1 5001 5659 -511 5866 116 53 12 chr2 144516775 144517748 -106170106 + L1PB1 LINE L1 4936 5973 -178 2048 111 0 17 chr2 144517748 144518045 -106169809 + AluSc SINE Alu 1 292 -17 5866 116 53 12 chr2 144518045 144518232 -106169622 + L1PB1 LINE L1 5973 6151 0 5245 54 0 1 chr2 144518940 144519619 -106168235 + L1PA6 LINE L1 5500 6177 0 295 145 121 84 chr2 144520148 144520231 -106167623 + L2 LINE L2 3137 3222 -50 318 390 81 39 chr2 144520898 144521208 -106166646 - L2 LINE L2 -26 3246 2924 1590 186 3 20 chr2 144521371 144521667 -106166187 + AluJo SINE Alu 2 292 -20 24 0 0 0 chr2 144521928 144521952 -106165902 + AT_rich Low_complexity Low_complexity 1 24 0 557 226 0 0 chr2 144522258 144522364 -106165490 - AluJo SINE Alu -20 292 187 4582 109 117 108 chr2 144522364 144523729 -106164125 + pTR5 LTR ERV1 743 2438 0 1121 195 5 5 chr2 144523732 144523922 -106163932 - AluJo SINE Alu -122 190 1 255 31 0 0 chr2 144524506 144524538 -106163316 + (GA)n Simple_repeat Simple_repeat 2 33 0 393 195 166 53 chr2 144524685 144524854 -106163000 + L1ME4a LINE L1 5925 6112 -9 23 68 0 0 chr2 144524854 144524898 -106162956 + AT_rich Low_complexity Low_complexity 1 44 0 365 282 162 83 chr2 144526408 144527007 -106160847 + L1 LINE L1 423 1068 -5235 3066 239 72 26 chr2 144527153 144527430 -106160424 + L1M3d LINE L1 777 1040 -5342 2148 127 0 7 chr2 144527430 144527737 -106160117 + AluSx SINE Alu 1 305 -7 3066 239 72 26 chr2 144527737 144529160 -106158694 + L1M3d LINE L1 1040 2682 -3700 678 167 0 8 chr2 144529182 144529308 -106158546 + L1M3d LINE L1 3705 3829 -2553 421 270 36 103 chr2 144529570 144529692 -106158162 + L1 LINE L1 2506 2635 -3747 2168 123 0 10 chr2 144529692 144529984 -106157870 - AluSx SINE Alu -23 289 1 421 270 36 103 chr2 144529984 144530191 -106157663 + L1 LINE L1 2635 2813 -3569 1131 189 117 8 chr2 144530332 144530580 -106157274 + AluJo SINE Alu 1 275 -37 453 218 109 57 chr2 144530587 144530798 -106157056 + L1MC4a LINE L1 6026 6247 -1561 697 208 0 0 chr2 144530805 144530954 -106156900 + L1MB7 LINE L1 6017 6165 -19 1313 227 60 60 chr2 144530970 144531420 -106156434 + L1MEc LINE L1 53 502 -5894 390 287 39 8 chr2 144531595 144531724 -106156130 - MIR SINE MIR -125 137 5 249 306 41 16 chr2 144531760 144531881 -106155973 + L2 LINE L2 2924 3047 -266 426 214 29 86 chr2 144532518 144532571 -106155283 - Charlie1 DNA MER1_type -5 2756 2702 2275 114 3 0 chr2 144532571 144532869 -106154985 + AluSx SINE Alu 1 299 -13 426 214 29 86 chr2 144532869 144533025 -106154829 - Charlie1 DNA MER1_type -59 2702 2559 198 146 36 18 chr2 144533027 144533082 -106154772 + (CATATA)n Simple_repeat Simple_repeat 5 60 0 1048 170 74 9 chr2 144533090 144533320 -106154534 - Charlie1 DNA MER1_type -396 2365 2121 422 73 0 0 chr2 144533952 144534007 -106153847 + (GA)n Simple_repeat Simple_repeat 1 55 0 501 279 95 41 chr2 144534007 144534301 -106153553 - LTR33 LTR ERVL -210 311 2 186 71 0 0 chr2 144534747 144534775 -106153079 + (T)n Simple_repeat Simple_repeat 1 28 0 504 276 6 19 chr2 144535857 144536013 -106151841 + L1MEc LINE L1 564 717 -5679 1447 165 4 24 chr2 144536083 144536331 -106151523 - AluJo SINE Alu -69 243 1 587 122 0 0 chr2 144536331 144536421 -106151433 + L1MEc LINE L1 701 790 -5606 344 236 99 25 chr2 144536419 144536580 -106151274 + L1MEc LINE L1 2110 2282 -4114 * 3001 222 110 24 chr2 144536584 144537529 -106150325 + L1MEc LINE L1 2926 3970 -2245 2100 116 0 11 chr2 144537529 144537841 -106150013 + AluSg SINE Alu 1 309 0 3001 222 110 24 chr2 144537841 144537928 -106149926 + L1MEc LINE L1 3970 4048 -2167 2243 89 22 28 chr2 144538029 144538353 -106149501 + THE1C LTR MaLR 53 374 -1 2393 85 0 0 chr2 144539674 144539969 -106147885 - AluSc SINE Alu -14 295 1 251 226 183 38 chr2 144540413 144540588 -106147266 + MIR SINE MIR 37 235 -27 490 289 103 31 chr2 144540603 144540797 -106147057 - MER63A DNA MER1_type 0 210 3 335 291 21 80 chr2 144541007 144541244 -106146610 + MLT1L LTR MaLR 1 223 -392 313 301 57 8 chr2 144541337 144541460 -106146394 + MLT1L LTR MaLR 379 507 -108 2105 165 83 22 chr2 144543946 144544353 -106143501 - MSTB1 LTR MaLR 0 432 1 1620 197 0 16 chr2 144544507 144544812 -106143042 - AluJo SINE Alu -12 300 1 2058 123 17 0 chr2 144544937 144545230 -106142624 + AluSx SINE Alu 1 298 -14 21 36 0 0 chr2 144545233 144545261 -106142593 + AT_rich Low_complexity Low_complexity 1 28 0 459 263 114 46 chr2 144545366 144545647 -106142207 + L2 LINE L2 3014 3313 0 319 297 91 24 chr2 144545709 144545848 -106142006 - MER5A DNA MER1_type -13 176 23 2315 96 3 0 chr2 144545848 144546141 -106141713 - AluSp SINE Alu -19 294 1 319 297 91 24 chr2 144546141 144546166 -106141688 - MER5A DNA MER1_type -166 23 1 465 339 6 6 chr2 144546612 144546783 -106141071 - MIR SINE MIR -76 186 16 308 253 158 32 chr2 144546786 144546944 -106140910 + MLT1K LTR MaLR 410 587 -1 563 281 136 52 chr2 144547423 144547768 -106140086 + LTR33 LTR ERVL 25 398 -123 925 252 120 58 chr2 144547769 144548330 -106139524 + MLT1H1 LTR MaLR 1 555 0 272 172 17 0 chr2 144548440 144548498 -106139356 + (TA)n Simple_repeat Simple_repeat 2 60 0 199 280 13 53 chr2 144548498 144548573 -106139281 - MIR3 SINE MIR -18 190 119 32 75 0 0 chr2 144549284 144549351 -106138503 + AT_rich Low_complexity Low_complexity 1 67 0 802 188 91 11 chr2 144549351 144549527 -106138327 - AluJo SINE Alu -1 311 122 960 264 56 12 chr2 144549611 144549861 -106137993 - MLT1K LTR MaLR -8 580 320 386 287 8 33 chr2 144549981 144550103 -106137751 - MLT1K LTR MaLR -468 120 2 2128 111 4 0 chr2 144550122 144550402 -106137452 + AluSp SINE Alu 1 281 -32 213 65 0 0 chr2 144550402 144550433 -106137421 + (CAA)n Simple_repeat Simple_repeat 3 33 0 2470 79 0 10 chr2 144550624 144550929 -106136925 - AluY SINE Alu -9 302 1 441 260 27 11 chr2 144551780 144551922 -106135932 - MER20B DNA MER1_type -4 215 69 359 294 70 7 chr2 144552081 144552224 -106135630 + MLT2C1 LTR ERVL 44 195 -202 * 2138 195 30 51 chr2 144552125 144552617 -106135237 + MLT1E2 LTR MaLR 88 569 -57 196 333 21 21 chr2 144552623 144552716 -106135138 - L3 LINE CR1 -188 1389 1297 180 0 0 0 chr2 144553557 144553577 -106134277 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 225 324 9 48 chr2 144553927 144554032 -106133822 + MER5A DNA MER1_type 7 107 -82 889 186 82 16 chr2 144554049 144554243 -106133611 - L1ME2 LINE L1 0 6164 5958 762 186 23 47 chr2 144554246 144554418 -106133436 - L1ME2 LINE L1 -263 5903 5736 2266 210 111 22 chr2 144554419 144554486 -106133368 - MLT1E LTR MaLR 0 593 533 1292 153 58 5 chr2 144554486 144554709 -106133145 - MER46A DNA MER2_type 0 236 2 2266 210 111 22 chr2 144554709 144555183 -106132671 - MLT1E LTR MaLR -60 533 4 1301 218 4 11 chr2 144555203 144555469 -106132385 - L1ME2 LINE L1 -455 5709 5446 342 301 33 44 chr2 144555579 144555762 -106132092 + MER5A DNA MER1_type 9 189 0 347 269 85 7 chr2 144555919 144556060 -106131794 - L1MC/D LINE L1 -2062 5746 5595 2397 68 0 32 chr2 144556480 144556788 -106131066 - AluY SINE Alu -13 298 1 257 278 16 13 chr2 144557546 144557653 -106130201 - MIR SINE MIR -84 124 20 210 303 76 0 chr2 144558988 144559054 -106128800 - L2 LINE L2 0 3313 3243 617 252 14 0 chr2 144559270 144559409 -106128445 - MER63A DNA MER1_type 0 210 70 2316 82 0 13 chr2 144559720 144560023 -106127831 - AluSg SINE Alu -11 299 1 182 250 14 0 chr2 144560317 144560389 -106127465 + (TA)n Simple_repeat Simple_repeat 2 74 0 31 26 0 0 chr2 144561844 144561882 -106125972 + GC_rich Low_complexity Low_complexity 1 38 0 205 85 0 64 chr2 144562146 144562193 -106125661 + (TCCC)n Simple_repeat Simple_repeat 3 46 0 320 337 0 0 chr2 144563503 144563601 -106124253 + CT-rich Low_complexity Low_complexity 3 100 0 260 265 114 45 chr2 144564130 144564262 -106123592 - MIR3 SINE MIR -66 142 2 324 275 88 0 chr2 144564389 144564480 -106123374 + L2 LINE L2 3168 3266 -6 2412 98 13 0 chr2 144566239 144566545 -106121309 - AluSg SINE Alu 0 310 1 38 51 0 0 chr2 144566606 144566665 -106121189 + AT_rich Low_complexity Low_complexity 1 59 0 2533 69 0 3 chr2 144569245 144569550 -106118304 + AluY SINE Alu 1 304 -7 397 293 83 6 chr2 144569614 144569771 -106118083 + MIR SINE MIR 84 252 -10 201 176 0 0 chr2 144570721 144570755 -106117099 + T-rich Low_complexity Low_complexity 1 34 0 383 287 207 0 chr2 144570769 144570933 -106116921 - MARNA DNA Mariner -361 225 28 1598 160 12 75 chr2 144571224 144571555 -106116299 - AluJo SINE Alu -2 310 1 288 291 25 13 chr2 144572801 144572880 -106114974 - MER5A DNA MER1_type -70 119 40 286 319 25 0 chr2 144572915 144573047 -106114807 + CT-rich Low_complexity Low_complexity 1 135 0 251 340 118 14 chr2 144573571 144573715 -106114139 + MIR3 SINE MIR 36 194 -14 2062 125 14 0 chr2 144574021 144574302 -106113552 + AluSx SINE Alu 1 285 -27 23 0 0 0 chr2 144574426 144574449 -106113405 + AT_rich Low_complexity Low_complexity 1 23 0 302 326 84 0 chr2 144574595 144574690 -106113164 - L2 LINE L2 -4 3268 3166 1991 131 42 0 chr2 144574795 144575078 -106112776 + AluSx SINE Alu 1 295 -17 988 137 17 0 chr2 144575291 144575466 -106112388 - L1MB2 LINE L1 0 6171 5994 3292 157 31 3 chr2 144575472 144575639 -106112215 - L1MB2 LINE L1 -214 5957 5796 2555 56 0 13 chr2 144575639 144575944 -106111910 + AluY SINE Alu 1 301 -10 3292 157 31 3 chr2 144575944 144576438 -106111416 - L1MB2 LINE L1 -375 5796 5268 1807 159 0 28 chr2 144576845 144577165 -106110689 - AluJo SINE Alu -1 311 1 5438 87 34 0 chr2 144577755 144578581 -106109273 + L1PB1 LINE L1 5294 6147 -4 232 295 115 33 chr2 144578698 144578820 -106109034 + MIR SINE MIR 53 184 -78 1218 193 43 94 chr2 144578875 144579248 -106108606 + MLT1A1 LTR MaLR 1 354 -11 198 294 7 124 chr2 144580059 144580212 -106107642 + L2 LINE L2 2600 2734 -580 415 272 29 44 chr2 144581141 144581198 -106106656 + L2 LINE L2 2928 2984 -288 1096 171 33 9 chr2 144581198 144581409 -106106445 - MER20 DNA MER1_type -3 216 1 415 272 29 44 chr2 144581409 144581487 -106106367 + L2 LINE L2 2984 3061 -211 1091 189 56 95 chr2 144581512 144581676 -106106178 - AluJb SINE Alu -11 301 151 194 0 39 0 chr2 144581676 144581702 -106106152 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1091 189 56 95 chr2 144581702 144581822 -106106032 - AluJb SINE Alu -161 151 28 508 325 47 0 chr2 144581854 144582023 -106105831 + L2 LINE L2 3119 3295 -18 360 243 29 43 chr2 144582920 144583060 -106104794 + L1ME2 LINE L1 4228 4365 -1781 792 167 37 25 chr2 144583635 144583797 -106104057 - MER5A DNA MER1_type -23 166 3 670 161 127 81 chr2 144583835 144584025 -106103829 + MER5C DNA MER1_type 74 279 -45 1682 176 0 19 chr2 144584025 144584332 -106103522 + AluJo SINE Alu 1 301 -11 670 161 127 81 chr2 144584332 144584377 -106103477 + MER5C DNA MER1_type 279 320 -4 22 0 0 0 chr2 144584651 144584673 -106103181 + AT_rich Low_complexity Low_complexity 1 22 0 324 229 25 0 chr2 144585315 144585384 -106102470 - MER5A DNA MER1_type -86 103 17 294 240 24 88 chr2 144585440 144585565 -106102289 + L1ME2 LINE L1 5554 5670 -494 963 213 102 25 chr2 144585587 144585949 -106101905 + L1ME2 LINE L1 5766 6155 -9 1826 161 3 0 chr2 144585960 144586252 -106101602 - AluJb SINE Alu -19 293 1 1866 133 11 4 chr2 144586507 144586786 -106101068 + MER1B DNA MER1_type 59 339 0 252 0 0 0 chr2 144586848 144586876 -106100978 + (A)n Simple_repeat Simple_repeat 1 28 0 2206 84 21 7 chr2 144586951 144587280 -106100574 + AluY SINE Alu 1 311 0 7051 37 5 0 chr2 144587641 144588536 -106099318 - L1PA4 LINE L1 -3 6152 5254 392 265 69 15 chr2 144588529 144588733 -106099121 + L1 LINE L1 3745 3959 -2187 * 375 269 158 33 chr2 144588844 144589205 -106098649 + L1 LINE L1 4028 4433 -1713 321 355 38 34 chr2 144589239 144589501 -106098353 + L1 LINE L1 4487 4749 -1397 270 222 68 80 chr2 144590292 144590468 -106097386 + L1ME4a LINE L1 5937 6110 -11 612 211 89 0 chr2 144590740 144590863 -106096991 - AluJo SINE Alu -176 136 3 346 234 26 0 chr2 144591723 144591800 -106096054 - MER112 DNA MER1_type -1 259 181 225 0 0 0 chr2 144591836 144591861 -106095993 + (TA)n Simple_repeat Simple_repeat 1 25 0 3112 192 41 11 chr2 144591873 144592507 -106095347 - MER82 DNA MER2_type 0 653 1 207 0 0 0 chr2 144592561 144592584 -106095270 + (CA)n Simple_repeat Simple_repeat 2 24 0 273 311 59 34 chr2 144592735 144592854 -106095000 - MER5B DNA MER1_type -54 124 3 964 202 22 6 chr2 144592874 144593057 -106094797 + MER5A DNA MER1_type 4 189 0 307 246 109 22 chr2 144593757 144593895 -106093959 - L2 LINE L2 -3 3310 3161 216 0 0 0 chr2 144594443 144594467 -106093387 + (CA)n Simple_repeat Simple_repeat 1 24 0 665 203 254 0 chr2 144594790 144595007 -106092847 + Charlie4a DNA MER1_type 21 292 -216 553 172 229 10 chr2 144594989 144595181 -106092673 + Charlie4a DNA MER1_type 275 508 0 * 1329 173 0 36 chr2 144595785 144596033 -106091821 - AluJo SINE Alu -11 301 63 2310 98 0 7 chr2 144596223 144596530 -106091324 + AluSc SINE Alu 1 305 -4 376 248 80 18 chr2 144596555 144596668 -106091186 - MIR SINE MIR -115 147 28 383 297 40 0 chr2 144597871 144597972 -106089882 - MIR3 SINE MIR -21 187 83 350 274 71 18 chr2 144598416 144598529 -106089325 - MIR3 SINE MIR -9 199 81 * 486 329 65 26 chr2 144598491 144598722 -106089132 + MIR SINE MIR 8 247 -15 190 264 57 0 chr2 144598753 144598806 -106089048 - MIR SINE MIR -129 133 78 296 284 49 0 chr2 144598992 144599073 -106088781 - L2 LINE L2 0 3313 3229 534 256 15 29 chr2 144600258 144600395 -106087459 - L2 LINE L2 -7 3306 3172 255 275 282 14 chr2 144600720 144600862 -106086992 + MIR SINE MIR 8 187 -75 1256 219 112 15 chr2 144600862 144601272 -106086582 + L1ME1 LINE L1 5713 6162 -4 323 272 0 0 chr2 144601286 144601367 -106086487 + MIR SINE MIR 180 260 -2 199 375 18 0 chr2 144602353 144602409 -106085445 + MIR SINE MIR 17 73 -135 2299 97 3 7 chr2 144602540 144602850 -106085004 + AluSc SINE Alu 1 309 0 1926 137 7 3 chr2 144602863 144603163 -106084691 + AluSx SINE Alu 1 301 -11 1391 219 75 10 chr2 144603266 144603653 -106084201 - L1M4 LINE L1 -2222 4422 4007 2096 142 0 19 chr2 144603653 144603971 -106083883 - AluSx SINE Alu 0 312 1 1391 219 75 10 chr2 144603971 144603984 -106083870 - L1M4 LINE L1 -2637 4007 3996 242 212 15 0 chr2 144603973 144604039 -106083815 - L1M4 LINE L1 -5045 1601 1535 * 344 167 0 13 chr2 144604040 144604118 -106083736 + CT-rich Low_complexity Low_complexity 3 79 0 2159 211 105 104 chr2 144604119 144604207 -106083647 - L1M4 LINE L1 -4975 1567 1481 2482 158 29 5 chr2 144604207 144604625 -106083229 - MSTA LTR MaLR 0 428 1 2159 211 105 104 chr2 144604625 144604753 -106083101 - L1M4 LINE L1 -5061 1481 1355 1894 151 17 13 chr2 144604753 144605052 -106082802 + AluJb SINE Alu 1 300 -12 2159 211 105 104 chr2 144605052 144605192 -106082662 - L1M4 LINE L1 -5187 1355 1217 1948 138 47 3 chr2 144605192 144605490 -106082364 - AluSx SINE Alu -1 311 1 2159 211 105 104 chr2 144605490 144606312 -106081542 - L1M4 LINE L1 -5325 1217 386 1816 164 20 7 chr2 144606365 144606807 -106081047 + AluJb SINE Alu 10 455 0 1152 18 58 6 chr2 144606813 144606984 -106080870 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 547 253 57 18 chr2 144607074 144607303 -106080551 - L1M4 LINE L1 -6291 251 14 319 283 125 27 chr2 144607837 144608021 -106079833 - HAL1b LINE L1 -444 904 703 269 284 16 0 chr2 144608028 144608155 -106079699 - L1M4 LINE L1 -1450 4696 4568 1063 152 11 0 chr2 144608523 144608701 -106079153 - AluSg/x SINE Alu -4 308 129 2101 147 91 47 chr2 144608981 144609411 -106078443 - LTR47A LTR ERVL 0 452 4 200 337 92 49 chr2 144609690 144609853 -106078001 + L2 LINE L2 2914 3083 -189 1842 104 86 25 chr2 144609878 144610158 -106077696 - AluSq SINE Alu -16 297 1 2353 78 7 0 chr2 144611257 144611552 -106076302 - AluSp SINE Alu -16 297 1 773 160 48 5 chr2 144611632 144611820 -106076034 - Charlie5 DNA MER1_type -27 2585 2390 381 258 0 0 chr2 144611850 144611943 -106075911 - Charlie5 DNA MER1_type -2519 93 1 1204 203 106 33 chr2 144612057 144612452 -106075402 + MER74A LTR ERVL 62 485 -73 1699 145 3 63 chr2 144612457 144612796 -106075058 + AluJb SINE Alu 1 312 0 1574 216 21 124 chr2 144612809 144613507 -106074347 + LTR8 LTR ERV1 1 533 -70 198 91 0 0 chr2 144613508 144613541 -106074313 + (A)n Simple_repeat Simple_repeat 1 33 0 276 103 0 0 chr2 144613762 144613801 -106074053 + MER91 DNA MER1_type 1 39 -151 795 161 45 96 chr2 144614195 144614394 -106073460 - MER5A DNA MER1_type 0 189 1 1553 179 21 17 chr2 144614642 144614933 -106072921 - AluJo SINE Alu -20 292 1 2289 84 0 0 chr2 144614940 144615261 -106072593 - AluSq SINE Alu 0 321 1 224 59 29 0 chr2 144616370 144616404 -106071450 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 518 234 14 69 chr2 144616426 144616571 -106071283 + MER5B DNA MER1_type 42 178 0 362 291 139 0 chr2 144616582 144616747 -106071107 + MIR SINE MIR 66 253 -9 953 224 72 73 chr2 144616831 144617251 -106070603 + L1ME2 LINE L1 5188 5598 -566 7728 131 18 5 chr2 144617261 144618540 -106069314 + HSMAR2 DNA Mariner 7 1302 0 1536 228 66 14 chr2 144618564 144619047 -106068807 + L1ME2 LINE L1 5648 6155 -9 33 56 0 0 chr2 144619208 144619262 -106068592 + AT_rich Low_complexity Low_complexity 1 54 0 1179 184 68 130 chr2 144619477 144619726 -106068128 + L1MC5 LINE L1 6857 7120 -841 2242 101 3 28 chr2 144619726 144620044 -106067810 - AluSx SINE Alu -2 310 1 2463 77 3 0 chr2 144620053 144620365 -106067489 - AluSq SINE Alu 0 313 1 2390 107 0 0 chr2 144620369 144620679 -106067175 - AluSx SINE Alu -2 310 1 1179 184 68 130 chr2 144620679 144621016 -106066838 + L1MC5 LINE L1 7131 7421 -540 2379 107 3 0 chr2 144621175 144621485 -106066369 - AluSq SINE Alu -2 311 1 849 211 99 55 chr2 144621755 144622229 -106065625 + L1MC5 LINE L1 7432 7926 -35 23 54 0 0 chr2 144622367 144622404 -106065450 + AT_rich Low_complexity Low_complexity 1 37 0 2697 169 19 21 chr2 144622647 144623161 -106064693 + MLT2B3 LTR ERVL 1 513 -41 327 132 0 0 chr2 144623163 144623231 -106064623 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 356 120 0 5 chr2 144623241 144623302 -106064552 + MLT2B3 LTR ERVL 462 554 0 2150 104 7 3 chr2 144623615 144623904 -106063950 - AluSq SINE Alu -23 290 1 1189 234 65 42 chr2 144623905 144624242 -106063612 + MLT2B1 LTR ERVL 102 446 -74 1173 142 0 27 chr2 144624271 144624417 -106063437 - U2 snRNA snRNA -3 185 43 2704 97 11 3 chr2 144624417 144624778 -106063076 + THE1B LTR MaLR 1 364 0 1173 142 0 27 chr2 144624778 144624814 -106063040 - U2 snRNA snRNA -145 43 8 342 200 0 25 chr2 144624813 144624893 -106062961 + MLT2C2 LTR ERVL 385 462 -2 * 2500 203 160 18 chr2 144624897 144625567 -106062287 + MLT1-int LTR MaLR 5 884 -487 403 239 0 0 chr2 144625618 144625706 -106062148 + MLT-int LTR MaLR 680 767 -968 2207 184 30 5 chr2 144625836 144626239 -106061615 + MLT1B-int LTR MaLR 1317 1729 -6 1626 220 25 38 chr2 144626245 144626640 -106061214 + MLT1B LTR MaLR 1 390 0 423 215 65 0 chr2 144626771 144626878 -106060976 - L1MA10 LINE L1 0 6334 6221 2111 117 0 0 chr2 144627097 144627379 -106060475 - AluJb SINE Alu -18 294 13 2565 186 9 24 chr2 144627379 144627916 -106059938 - L1MC3 LINE L1 -8 7777 7249 1479 252 121 0 chr2 144628410 144628666 -106059188 - MER90 LTR ERV1 -105 509 285 2158 146 82 27 chr2 144628666 144629070 -106058784 + MSTB LTR MaLR 1 426 0 1479 252 121 0 chr2 144629070 144629258 -106058596 - MER90 LTR ERV1 -329 285 11 201 288 0 0 chr2 144629286 144629352 -106058502 - MIR SINE MIR -43 219 154 332 313 42 6 chr2 144629352 144629518 -106058336 - LTR16C LTR ERVL 0 491 320 274 250 0 0 chr2 144631511 144631575 -106056279 + MIR3 SINE MIR 93 156 -52 559 205 135 0 chr2 144631619 144631780 -106056074 - MER5A DNA MER1_type 0 189 4 463 307 68 5 chr2 144631839 144632031 -106055823 + MIR SINE MIR 47 250 -12 593 316 48 12 chr2 144632560 144632810 -106055044 + L2 LINE L2 2174 2432 -882 476 262 71 0 chr2 144632941 144633082 -106054772 + MLT1F LTR MaLR 1 151 -391 2228 99 0 10 chr2 144633082 144633375 -106054479 - AluSg SINE Alu -20 290 1 1828 189 19 14 chr2 144633378 144633749 -106054105 - L1MB7 LINE L1 -51 6133 5761 3551 56 7 5 chr2 144633860 144634306 -106053548 - L1PA7 LINE L1 0 6154 5708 2089 127 0 3 chr2 144634308 144634591 -106053263 - AluSg SINE Alu -28 282 1 1777 207 60 8 chr2 144634591 144634973 -106052881 + MLT1F LTR MaLR 141 542 0 1073 233 107 6 chr2 144634980 144635345 -106052509 + L2 LINE L2 2458 2859 -455 698 173 8 8 chr2 144635840 144635973 -106051881 - AluJo SINE Alu -178 134 2 463 265 43 27 chr2 144636732 144636917 -106050937 - MER112 DNA MER1_type -6 254 67 1529 74 50 5 chr2 144636940 144637142 -106050712 + AluY SINE Alu 101 311 0 1473 199 82 3 chr2 144637203 144637519 -106050335 + MER58B DNA MER1_type 1 341 0 584 252 71 73 chr2 144637716 144638104 -106049750 + LTR16A1 LTR ERVL 82 455 -2 2231 98 3 0 chr2 144639132 144639417 -106048437 - AluSx SINE Alu -26 286 1 2322 71 6 40 chr2 144639553 144639875 -106047979 - AluY SINE Alu 0 311 1 2211 107 3 0 chr2 144640721 144641046 -106046808 - AluSq SINE Alu 0 313 1 394 219 107 64 chr2 144641700 144641887 -106045967 - L1MB7 LINE L1 -484 5637 5446 223 299 58 11 chr2 144642456 144642543 -106045311 + L2 LINE L2 3147 3237 -35 1419 160 256 20 chr2 144642628 144642972 -106044882 + MSTA LTR MaLR 4 428 0 3125 96 18 5 chr2 144643385 144643834 -106044020 + L1PA11 LINE L1 5720 6174 0 742 196 82 2 chr2 144643899 144644092 -106043762 - L1MB7 LINE L1 0 6184 5949 2052 67 117 7 chr2 144644559 144644859 -106042995 - L1MA1 LINE L1 0 6302 5970 2719 198 52 2 chr2 144644898 144645442 -106042412 + MER90 LTR ERV1 1 614 0 1479 150 169 0 chr2 144645630 144645897 -106041957 + AluJb SINE Alu 1 312 0 357 213 53 0 chr2 144645938 144646036 -106041818 + HsTC2 DNA Tc2 2 1898 0 2558 70 0 6 chr2 144646361 144646674 -106041180 - AluY SINE Alu 0 311 1 440 250 138 6 chr2 144647187 144647347 -106040507 + MER5A DNA MER1_type 9 189 0 187 227 0 0 chr2 144648654 144648698 -106039156 - L2 LINE L2 -18 3254 3211 766 208 22 34 chr2 144648805 144648983 -106038871 - MER5B DNA MER1_type -1 177 2 1921 148 0 0 chr2 144649263 144649573 -106038281 + AluSq SINE Alu 13 322 0 2316 109 3 0 chr2 144650892 144651196 -106036658 - AluSx SINE Alu -7 305 1 2425 174 45 5 chr2 144651737 144652186 -106035668 - MLT1C LTR MaLR 0 467 1 550 180 0 0 chr2 144653367 144653467 -106034387 + FLAM_A SINE Alu 37 136 -6 2107 215 60 16 chr2 144655018 144655515 -106032339 - LTR53 LTR ERVL 0 519 1 205 307 48 66 chr2 144655654 144655820 -106032034 + L2 LINE L2 2596 2758 -556 415 141 22 0 chr2 144656031 144656123 -106031731 + CT-rich Low_complexity Low_complexity 1 94 0 984 174 0 0 chr2 144656129 144656284 -106031570 - FRAM SINE Alu -23 153 1 3551 137 11 29 chr2 144656612 144657240 -106030614 - L1MC1 LINE L1 -13 6320 5704 1848 144 45 23 chr2 144657616 144657969 -106029885 + MER46B DNA MER2_type 1 236 0 259 254 262 0 chr2 144657976 144658102 -106029752 - MIR SINE MIR 0 262 104 188 0 74 0 chr2 144658589 144658616 -106029238 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2070 127 7 0 chr2 144658620 144658947 -106028907 + AluSx SINE Alu 1 329 0 653 311 87 19 chr2 144659059 144659381 -106028473 + ERVL LTR ERVL 4212 4555 -1209 1001 271 98 3 chr2 144659503 144659820 -106028034 + LTR16A LTR ERVL 104 450 0 1991 102 27 114 chr2 144660362 144660722 -106027132 + THE1C LTR MaLR 1 322 -53 2220 108 0 0 chr2 144660722 144661010 -106026844 - AluSc SINE Alu -10 299 12 1991 102 27 114 chr2 144661010 144661060 -106026794 + THE1C LTR MaLR 322 375 0 768 260 10 5 chr2 144662925 144663129 -106024725 + MIR SINE MIR 37 241 -21 2199 123 7 3 chr2 144663627 144663929 -106023925 - AluSx SINE Alu -9 303 1 205 253 153 47 chr2 144664204 144664354 -106023500 - L2 LINE L2 -429 2885 2720 411 305 76 46 chr2 144664820 144665017 -106022837 - MIR SINE MIR -3 259 57 1071 167 14 42 chr2 144665453 144665669 -106022185 + MER20 DNA MER1_type 5 214 -5 12524 42 11 8 chr2 144665768 144666716 -106021138 - L1PA5 LINE L1 -3 6151 5207 237 33 0 0 chr2 144666716 144666746 -106021108 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2196 85 7 7 chr2 144666746 144667029 -106020825 - AluSq SINE Alu -30 283 1 12524 42 11 8 chr2 144667029 144668392 -106019462 - L1PA5 LINE L1 -946 5208 3836 277 238 24 12 chr2 144668871 144668955 -106018899 + MER5A DNA MER1_type 25 109 -80 465 228 108 99 chr2 144671264 144671351 -106016503 + L1ME4a LINE L1 5778 5863 -258 1979 162 0 3 chr2 144671351 144671653 -106016201 - AluJb SINE Alu -11 301 1 465 228 108 99 chr2 144671653 144671899 -106015955 + L1ME4a LINE L1 5863 6114 -7 887 257 152 41 chr2 144672072 144672381 -106015473 + LTR33 LTR ERVL 1 274 -247 1258 190 104 71 chr2 144672381 144672833 -106015021 + MLT1C LTR MaLR 1 467 0 887 257 152 41 chr2 144672833 144672891 -106014963 + LTR33 LTR ERVL 274 324 -197 195 42 0 0 chr2 144672891 144672915 -106014939 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 887 257 152 41 chr2 144672915 144673013 -106014841 + LTR33 LTR ERVL 324 519 -2 547 257 96 12 chr2 144673033 144673377 -106014477 + MLT1L LTR MaLR 84 545 -70 235 289 106 19 chr2 144673722 144673826 -106014028 - L2 LINE L2 -4 3268 3156 1413 188 0 28 chr2 144673842 144674097 -106013757 + AluJo SINE Alu 1 248 -64 419 275 47 13 chr2 144675047 144675196 -106012658 - MER103 DNA DNA 0 166 13 338 245 51 10 chr2 144675839 144675937 -106011917 + MER5A DNA MER1_type 11 112 -77 880 279 153 29 chr2 144676010 144676462 -106011392 - L2 LINE L2 0 3313 2806 1133 132 16 16 chr2 144676473 144676655 -106011199 - MER5A DNA MER1_type -7 182 1 405 286 25 0 chr2 144676655 144676762 -106011092 - L2 LINE L2 -503 2811 2702 1557 339 78 32 chr2 144676764 144678183 -106009671 + L2 LINE L2 133 1693 -1621 278 207 126 0 chr2 144678183 144678270 -106009584 - HAL1 LINE L1 -142 2365 2268 627 277 91 12 chr2 144678282 144678524 -106009330 - HAL1 LINE L1 -291 2216 1956 854 285 97 10 chr2 144678588 144678886 -106008968 - MLT1G LTR MaLR -266 324 1 1730 158 0 38 chr2 144678950 144679266 -106008588 - AluSx SINE Alu -8 304 1 898 198 85 0 chr2 144679573 144679750 -106008104 + MER3 DNA MER1_type 1 192 -17 395 257 18 0 chr2 144679834 144679947 -106007907 - Charlie2a DNA MER1_type -3 2859 2745 * 795 144 58 0 chr2 144679934 144680107 -106007747 - Charlie2a DNA MER1_type -1839 1023 841 680 198 46 51 chr2 144680156 144680279 -106007575 - Charlie2a DNA MER1_type -2356 426 303 2471 7 0 0 chr2 144680279 144680554 -106007300 - AluYb8 SINE Alu -11 307 33 680 198 46 51 chr2 144680554 144680627 -106007227 - Charlie2a DNA MER1_type -2479 303 231 274 326 31 8 chr2 144680654 144680783 -106007071 - Charlie2a DNA MER1_type -2650 132 1 1880 101 4 0 chr2 144681318 144681585 -106006269 + AluSc SINE Alu 42 309 0 705 219 87 16 chr2 144683914 144684097 -106003757 - MLT1C LTR MaLR -271 196 1 190 256 0 0 chr2 144685961 144686004 -106001850 + L2 LINE L2 3271 3313 0 244 250 88 38 chr2 144686093 144686173 -106001681 + MIR3 SINE MIR 87 170 -38 509 194 11 155 chr2 144686222 144686429 -106001425 + L1MC5 LINE L1 7605 7740 -221 1641 175 3 10 chr2 144686429 144686726 -106001128 - AluJb SINE Alu -17 295 1 509 194 11 155 chr2 144686726 144686879 -106000975 + L1MC5 LINE L1 7740 7913 -48 232 279 0 16 chr2 144687093 144687154 -106000700 + MLT1L LTR MaLR 140 199 -416 357 310 35 28 chr2 144687259 144687404 -106000450 + MLT1L LTR MaLR 367 512 -103 1795 132 4 0 chr2 144687436 144687708 -106000146 - AluSx SINE Alu 0 312 40 3535 149 52 123 chr2 144688141 144688604 -105999250 + LTR39 LTR ERV1 1 495 -288 844 206 19 0 chr2 144688604 144688759 -105999095 - FRAM SINE Alu -4 162 5 204 40 0 0 chr2 144688769 144688794 -105999060 + (TG)n Simple_repeat Simple_repeat 2 26 0 3535 149 52 123 chr2 144688794 144689162 -105998692 + LTR39 LTR ERV1 504 783 0 498 345 38 26 chr2 144689565 144689878 -105997976 + L2 LINE L2 2454 2770 -544 344 329 72 58 chr2 144689942 144690289 -105997565 + L2 LINE L2 2902 3253 -19 500 91 0 0 chr2 144691096 144691162 -105996692 + AluS SINE Alu 2 67 -246 1959 101 4 0 chr2 144691162 144691430 -105996424 + AluSg SINE Alu 33 301 -9 321 329 82 7 chr2 144693232 144693378 -105994476 + MARNA DNA Mariner 49 205 -381 487 333 88 26 chr2 144694466 144694805 -105993049 - MLT1K LTR MaLR -17 571 212 210 200 36 36 chr2 144695578 144695633 -105992221 - MIR SINE MIR -50 212 158 379 231 33 58 chr2 144695659 144695780 -105992074 - MIR SINE MIR -97 165 48 21 0 0 0 chr2 144696843 144696864 -105990990 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr2 144696864 144696887 -105990967 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2338 121 54 8 chr2 144696926 144697298 -105990556 + MLT1B LTR MaLR 2 390 0 233 275 14 29 chr2 144698102 144698171 -105989683 + L2 LINE L2 3246 3313 0 302 288 0 0 chr2 144698395 144698461 -105989393 + L2 LINE L2 3207 3272 0 504 250 0 0 chr2 144699492 144699668 -105988186 + (CA)n Simple_repeat Simple_repeat 1 176 0 369 233 0 0 chr2 144699681 144699797 -105988057 + (CA)n Simple_repeat Simple_repeat 2 117 0 1304 184 106 63 chr2 144700329 144700677 -105987177 - MLT1B LTR MaLR -17 373 11 270 354 47 47 chr2 144700709 144700901 -105986953 - L2 LINE L2 -572 2742 2551 2754 105 2 17 chr2 144701528 144701938 -105985916 - L1PA10 LINE L1 0 6168 5765 262 111 133 0 chr2 144702530 144702575 -105985279 - MIR3 SINE MIR -48 160 110 814 127 155 7 chr2 144703064 144703206 -105984648 - MLT1B LTR MaLR 0 390 228 291 263 158 47 chr2 144703794 144704175 -105983679 + LTR16A1 LTR ERVL 1 423 -34 559 278 91 45 chr2 144704862 144705060 -105982794 + MIR SINE MIR 35 241 -21 516 276 39 39 chr2 144707904 144708107 -105979747 - MIR SINE MIR -41 221 19 233 299 0 0 chr2 144708617 144708684 -105979170 + Charlie7 DNA MER1_type 10 76 -2536 325 239 52 52 chr2 144708711 144708866 -105978988 + Charlie7 DNA MER1_type 2458 2612 0 698 265 98 9 chr2 144710126 144710341 -105977513 - MIR SINE MIR 0 262 29 1941 142 3 0 chr2 144710771 144711067 -105976787 + AluSx SINE Alu 1 297 -15 553 241 44 38 chr2 144711284 144711442 -105976412 - MIR SINE MIR -51 211 53 504 297 90 62 chr2 144712299 144712840 -105975014 + L2 LINE L2 2642 3272 0 871 213 18 0 chr2 144713414 144713578 -105974276 + MER20 DNA MER1_type 47 213 -6 217 143 0 24 chr2 144715815 144715857 -105971997 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr2 144716777 144716798 -105971056 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 144716859 144716887 -105970967 + AT_rich Low_complexity Low_complexity 1 28 0 417 257 132 7 chr2 144718966 144719102 -105968752 + MER63A DNA MER1_type 52 204 -6 34 0 0 0 chr2 144719166 144719200 -105968654 + AT_rich Low_complexity Low_complexity 1 34 0 498 323 60 4 chr2 144719322 144719570 -105968284 + Charlie8 DNA MER1_type 3 264 -2153 740 245 143 36 chr2 144719623 144719986 -105967868 + MLT1J2 LTR MaLR 4 405 -45 329 304 0 0 chr2 144720035 144720114 -105967740 + Charlie8 DNA MER1_type 2337 2415 -2 279 323 0 31 chr2 144720147 144720243 -105967611 + MIR3 SINE MIR 103 195 -13 225 290 21 21 chr2 144721936 144722029 -105965825 + Charlie8 DNA MER1_type 3 95 -2322 24 32 0 0 chr2 144723044 144723075 -105964779 + AT_rich Low_complexity Low_complexity 1 31 0 278 298 9 61 chr2 144723191 144723231 -105964623 - MIR SINE MIR -3 259 218 2552 27 0 3 chr2 144723231 144723531 -105964323 - AluY SINE Alu -12 299 1 278 298 9 61 chr2 144723531 144723604 -105964250 - MIR SINE MIR -44 218 152 488 244 208 0 chr2 144724998 144725166 -105962688 - MIR SINE MIR -13 249 47 398 309 281 29 chr2 144725327 144726176 -105961678 + L2 LINE L2 1783 2845 -469 203 325 117 71 chr2 144726253 144726450 -105961404 + L2 LINE L2 2977 3182 -90 255 316 61 9 chr2 144726544 144726658 -105961196 + MIR SINE MIR 72 191 -71 21 36 0 0 chr2 144727717 144727745 -105960109 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 144728207 144728229 -105959625 + AT_rich Low_complexity Low_complexity 1 22 0 416 293 136 15 chr2 144728963 144729161 -105958693 + MIR SINE MIR 15 236 -26 23 0 0 0 chr2 144730443 144730466 -105957388 + AT_rich Low_complexity Low_complexity 1 23 0 204 219 0 0 chr2 144730484 144730525 -105957329 - MIR SINE MIR -10 252 212 23 54 0 0 chr2 144730687 144730724 -105957130 + AT_rich Low_complexity Low_complexity 1 37 0 1648 167 7 34 chr2 144731700 144731994 -105955860 - AluJb SINE Alu -22 290 5 1729 95 9 4 chr2 144732375 144732607 -105955247 + AluSq SINE Alu 3 235 -78 347 318 77 15 chr2 144732921 144733116 -105954738 + MIR SINE MIR 6 212 -50 1035 182 0 6 chr2 144733205 144733370 -105954484 - AluJo/FRAM SINE Alu -2 300 137 1387 173 4 9 chr2 144733372 144733603 -105954251 - AluJb SINE Alu -82 230 1 270 217 50 0 chr2 144733725 144733785 -105954069 + L2 LINE L2 3251 3313 0 238 217 14 0 chr2 144733786 144733855 -105953999 - MER113 DNA MER1_type? -410 111 42 35 41 0 0 chr2 144733917 144733966 -105953888 + AT_rich Low_complexity Low_complexity 1 49 0 2412 58 0 6 chr2 144736016 144736329 -105951525 - AluY SINE Alu 0 311 1 261 313 138 27 chr2 144736923 144737147 -105950707 - MIR SINE MIR -10 252 4 21 36 0 0 chr2 144742076 144742104 -105945750 + AT_rich Low_complexity Low_complexity 1 28 0 340 314 159 39 chr2 144742490 144743031 -105944823 + L2 LINE L2 1070 1675 -1639 402 329 71 60 chr2 144743219 144743669 -105944185 + L2 LINE L2 1302 1756 -1558 401 276 48 14 chr2 144743710 144743855 -105943999 - L1MA9 LINE L1 -39 6273 6124 483 263 88 26 chr2 144743856 144744050 -105943804 + L2 LINE L2 1792 1997 -1317 213 214 0 0 chr2 144744193 144744235 -105943619 + CT-rich Low_complexity Low_complexity 2 43 0 622 292 132 33 chr2 144744422 144745145 -105942709 - L1MC4a LINE L1 -789 5357 5067 26 50 0 0 chr2 144746440 144746480 -105941374 + AT_rich Low_complexity Low_complexity 1 40 0 26 74 0 0 chr2 144748844 144748898 -105938956 + AT_rich Low_complexity Low_complexity 1 54 0 790 275 108 25 chr2 144749061 144749498 -105938356 - L1ME4a LINE L1 -157 5964 5492 387 276 35 69 chr2 144749707 144749881 -105937973 + MER5B DNA MER1_type 3 170 -8 22 80 0 0 chr2 144749990 144750040 -105937814 + AT_rich Low_complexity Low_complexity 1 50 0 230 320 48 7 chr2 144750315 144750462 -105937392 - L1ME LINE L1 -328 5793 5641 22 35 0 0 chr2 144750957 144750986 -105936868 + AT_rich Low_complexity Low_complexity 1 29 0 189 167 70 132 chr2 144751410 144751524 -105936330 - MER5C DNA MER1_type -22 302 196 332 315 0 0 chr2 144752044 144752117 -105935737 + L2 LINE L2 3188 3260 -12 1877 103 92 0 chr2 144752992 144753263 -105934591 - AluSg SINE Alu -11 299 4 392 220 11 22 chr2 144754778 144754869 -105932985 + L2 LINE L2 3220 3309 -4 303 270 117 12 chr2 144754895 144755058 -105932796 - MER112 DNA MER1_type -27 233 54 * 393 254 62 72 chr2 144755048 144755257 -105932597 - MER112 DNA MER1_type -24 236 30 223 386 41 21 chr2 144757515 144757660 -105930194 + MIR3 SINE MIR 22 169 -39 392 339 98 11 chr2 144758562 144758745 -105929109 + MIR SINE MIR 20 218 -44 204 189 38 19 chr2 144763269 144763322 -105924532 + GA-rich Low_complexity Low_complexity 2 55 0 24 77 0 0 chr2 144763366 144763418 -105924436 + AT_rich Low_complexity Low_complexity 1 52 0 229 195 49 0 chr2 144764011 144764052 -105923802 - 5S rRNA rRNA -78 43 1 515 298 79 6 chr2 144764338 144764516 -105923338 + MER117 DNA MER1_type 6 196 -1 188 389 33 0 chr2 144765927 144766017 -105921837 + L2 LINE L2 2961 3053 -219 1459 254 107 45 chr2 144766196 144766570 -105921284 + L1MC4 LINE L1 7270 7692 -350 1573 181 7 48 chr2 144766570 144766880 -105920974 - AluJo SINE Alu -13 299 3 1459 254 107 45 chr2 144766880 144767077 -105920777 + L1MC4 LINE L1 7692 7876 -166 345 180 135 0 chr2 144767078 144767167 -105920687 + L1MC4 LINE L1 7936 8036 -6 2204 113 3 0 chr2 144770326 144770626 -105917228 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 144773816 144773837 -105914017 + AT_rich Low_complexity Low_complexity 1 21 0 342 177 51 63 chr2 144775003 144775082 -105912772 - L2 LINE L2 0 3272 3195 1787 168 82 3 chr2 144775087 144775415 -105912439 + MLT1A1 LTR MaLR 1 354 -11 708 202 67 56 chr2 144775969 144776147 -105911707 + MER5A DNA MER1_type 1 180 -9 1059 141 30 0 chr2 144776508 144776707 -105911147 + L1 LINE L1 4457 4661 -1485 416 278 31 21 chr2 144777383 144777574 -105910280 - L1ME4a LINE L1 -257 5864 5672 33 0 0 0 chr2 144777814 144777847 -105910007 + AT_rich Low_complexity Low_complexity 1 33 0 198 143 0 0 chr2 144778119 144778154 -105909700 + (TG)n Simple_repeat Simple_repeat 2 36 0 383 267 89 92 chr2 144778272 144778553 -105909301 + L2 LINE L2 3031 3310 -3 1669 160 10 24 chr2 144779052 144779345 -105908509 - AluJb SINE Alu -23 289 1 959 251 53 41 chr2 144780757 144781053 -105906801 + MLT1H LTR MaLR 1 348 -207 572 186 287 16 chr2 144781223 144781411 -105906443 + MIR SINE MIR 6 244 -18 21 57 0 0 chr2 144781507 144781542 -105906312 + AT_rich Low_complexity Low_complexity 1 35 0 233 183 14 28 chr2 144781622 144781693 -105906161 + L1ME4a LINE L1 6048 6117 -4 263 227 73 82 chr2 144781964 144782074 -105905780 + L2 LINE L2 2954 3062 -251 23 68 0 0 chr2 144782994 144783038 -105904816 + AT_rich Low_complexity Low_complexity 1 44 0 865 281 77 26 chr2 144783682 144783995 -105903859 + MER102b DNA MER1_type 13 341 0 255 125 0 0 chr2 144784283 144784323 -105903531 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1046 87 5 32 chr2 144784324 144784509 -105903345 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 261 0 0 0 chr2 144784926 144784955 -105902899 + (CA)n Simple_repeat Simple_repeat 2 30 0 194 0 0 37 chr2 144785132 144785159 -105902695 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7243 39 9 2 chr2 144785234 144786418 -105901436 + L1PA5 LINE L1 4963 6152 -2 278 327 58 0 chr2 144786641 144786745 -105901109 - L2 LINE L2 -22 3291 3182 203 247 62 74 chr2 144787414 144787495 -105900359 - MIR SINE MIR -3 259 180 6919 114 23 15 chr2 144787508 144788874 -105898980 - L1MA3 LINE L1 0 6305 4927 344 283 30 10 chr2 144788874 144788973 -105898881 - MIR SINE MIR -68 194 94 335 242 32 40 chr2 144789001 144789125 -105898729 + L2 LINE L2 3097 3219 -94 183 236 55 18 chr2 144789104 144789159 -105898695 - L2 LINE L2 -44 3269 3213 * 250 175 175 31 chr2 144789181 144789278 -105898576 + L2 LINE L2 3201 3311 -2 7556 30 0 1 chr2 144789381 144790452 -105897402 + L1PA4 LINE L1 5084 6154 -1 222 118 216 20 chr2 144791156 144791207 -105896647 + L2 LINE L2 3203 3263 -9 238 380 109 7 chr2 144791236 144791373 -105896481 + MIR3 SINE MIR 8 158 -50 1812 160 17 13 chr2 144791519 144791819 -105896035 + AluJo SINE Alu 2 302 -10 7728 148 45 8 chr2 144792257 144794163 -105893691 + Ricksha_c DNA DNA 9 2046 0 2114 105 16 7 chr2 144794276 144794580 -105893274 + AluSc SINE Alu 1 307 -2 33 0 0 0 chr2 144794750 144794783 -105893071 + AT_rich Low_complexity Low_complexity 1 33 0 2079 118 4 0 chr2 144794885 144795164 -105892690 + AluSx SINE Alu 1 280 -32 255 31 0 0 chr2 144795166 144795198 -105892656 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 5066 227 35 24 chr2 144795688 144797060 -105890794 + L1PA15 LINE L1 1522 2908 -3238 10945 182 32 1 chr2 144797062 144800167 -105887687 + L1PA15 LINE L1 3028 6155 -10 326 289 129 27 chr2 144800838 144801063 -105886791 + L1M4 LINE L1 2383 2630 -3516 656 257 162 0 chr2 144801163 144801373 -105886481 + MIR SINE MIR 3 246 -16 10029 87 1 1 chr2 144801566 144803714 -105884140 - L1PA7 LINE L1 -15 6139 3990 9477 30 1 0 chr2 144803757 144805649 -105882205 - L1PA4 LINE L1 -1 6154 4249 21960 112 9 114 chr2 144805649 144807351 -105880503 - L1PA7 LINE L1 -2134 4012 2134 2535 77 0 0 chr2 144807351 144807662 -105880192 - AluY SINE Alu 0 311 1 21960 112 9 114 chr2 144807662 144810426 -105877428 - L1PA7 LINE L1 -4012 2134 12 195 273 0 0 chr2 144810441 144810485 -105877369 - L2 LINE L2 -2053 1261 1218 1681 158 4 14 chr2 144810534 144810813 -105877041 + AluJb SINE Alu 5 280 -32 432 0 0 0 chr2 144810813 144810861 -105876993 + (CAAAA)n Simple_repeat Simple_repeat 5 52 0 287 209 111 81 chr2 144810950 144811122 -105876732 + L1MC4 LINE L1 7864 8040 -2 398 318 92 38 chr2 144811860 144812201 -105875653 + L1M4 LINE L1 4705 5079 -1067 4206 190 8 17 chr2 144812256 144813195 -105874659 - L1PB3 LINE L1 -1082 5064 4135 * 5017 119 11 61 chr2 144813191 144813419 -105874435 + L1PB3 LINE L1 5079 5317 -981 1772 177 0 0 chr2 144813419 144813730 -105874124 + AluJb SINE Alu 1 311 0 5017 119 11 61 chr2 144813730 144814117 -105873737 + L1PB3 LINE L1 5317 5722 -576 1671 171 0 52 chr2 144814117 144814426 -105873428 + AluJb SINE Alu 1 293 -19 5017 119 11 61 chr2 144814426 144814951 -105872903 + L1PB3 LINE L1 5722 6298 0 13908 224 20 15 chr2 144815017 144819176 -105868678 + L1PA13 LINE L1 1201 5383 -1414 189 94 0 0 chr2 144819176 144819208 -105868646 + (TC)n Simple_repeat Simple_repeat 2 33 0 3031 161 37 17 chr2 144819317 144820378 -105867476 - L1P4 LINE L1 -361 5804 4735 279 0 0 0 chr2 144820379 144820410 -105867444 + (TG)n Simple_repeat Simple_repeat 2 32 0 264 91 0 0 chr2 144820441 144820485 -105867369 + (GA)n Simple_repeat Simple_repeat 2 45 0 717 94 0 0 chr2 144820593 144820689 -105867165 - AluY SINE Alu -215 96 1 380 117 0 0 chr2 144820690 144820750 -105867104 + L1P3 LINE L1 1550 1609 -4852 490 35 0 0 chr2 144820751 144820809 -105867045 + L1P3 LINE L1 1128 1185 -5276 6292 134 5 9 chr2 144820810 144821877 -105865977 + L1P3 LINE L1 1610 2671 -3790 5260 90 0 0 chr2 144821984 144822725 -105865129 - L1P LINE L1 -3096 3050 2310 243 0 0 0 chr2 144822725 144822752 -105865102 + (T)n Simple_repeat Simple_repeat 1 27 0 1684 98 0 20 chr2 144823346 144823601 -105864253 + L1PA15 LINE L1 5910 6159 -6 835 284 64 42 chr2 144823603 144823707 -105864147 + L1ME4a LINE L1 5159 5259 -862 1510 156 0 82 chr2 144823707 144824022 -105863832 + AluJb SINE Alu 1 289 -23 835 284 64 42 chr2 144824022 144824640 -105863214 + L1ME4a LINE L1 5259 5898 -223 285 210 0 0 chr2 144824978 144825040 -105862814 + CT-rich Low_complexity Low_complexity 1 62 0 1814 180 6 10 chr2 144825040 144825351 -105862503 - AluJb SINE Alu 0 312 3 1863 184 18 18 chr2 144825393 144825736 -105862118 + MER2 DNA MER2_type 1 343 -1 25 0 0 0 chr2 144826359 144826384 -105861470 + AT_rich Low_complexity Low_complexity 1 25 0 438 65 0 0 chr2 144827055 144827117 -105860737 + (CA)n Simple_repeat Simple_repeat 2 63 0 703 299 75 62 chr2 144827374 144827995 -105859859 - L2 LINE L2 -36 3277 2644 977 179 6 0 chr2 144828262 144828418 -105859436 - AluSg/x SINE Alu -29 283 127 29 0 0 0 chr2 144828418 144828447 -105859407 + AT_rich Low_complexity Low_complexity 1 29 0 760 184 50 0 chr2 144828479 144828620 -105859234 - AluJb SINE Alu -164 148 1 447 301 55 59 chr2 144828780 144828999 -105858855 + L2 LINE L2 2757 2974 -340 328 271 12 0 chr2 144829028 144829113 -105858741 + L1MEc LINE L1 562 647 -5749 474 265 58 26 chr2 144829166 144829355 -105858499 + L2 LINE L2 3118 3312 -1 30 89 0 0 chr2 144829531 144829610 -105858244 + AT_rich Low_complexity Low_complexity 1 79 0 2370 245 100 22 chr2 144829637 144830416 -105857438 + L1MEc LINE L1 36 875 -5521 2233 215 38 4 chr2 144830416 144830890 -105856964 + L1MD2 LINE L1 5846 6335 -24 1049 155 104 78 chr2 144830907 144830977 -105856877 + L1MEc LINE L1 869 936 -5460 2082 143 0 3 chr2 144830977 144831278 -105856576 + AluSx SINE Alu 1 300 -12 1049 155 104 78 chr2 144831278 144831542 -105856312 + L1MEc LINE L1 936 1212 -5184 1111 226 110 25 chr2 144831648 144832092 -105855762 + L1ME1 LINE L1 5709 6331 -3 2949 231 32 10 chr2 144832096 144832868 -105854986 + L1MC4a LINE L1 7017 7805 -3 1032 330 50 31 chr2 144833096 144833578 -105854276 + L3 LINE CR1 182 672 -905 21 71 0 0 chr2 144834217 144834259 -105853595 + AT_rich Low_complexity Low_complexity 1 42 0 14007 32 3 1 chr2 144834353 144836819 -105851035 + L1PA4 LINE L1 3702 6169 0 2428 56 7 3 chr2 144836828 144837130 -105850724 + AluY SINE Alu 1 303 -8 276 258 113 40 chr2 144837483 144837607 -105850247 - LTR33 LTR ERVL 0 521 389 630 234 50 7 chr2 144837705 144837846 -105850008 - LTR33 LTR ERVL -328 193 47 228 329 14 0 chr2 144837847 144837920 -105849934 - L2 LINE L2 -1054 2260 2187 374 320 78 47 chr2 144838251 144838573 -105849281 - L2 LINE L2 -1387 1927 1596 2316 91 10 0 chr2 144838733 144839031 -105848823 + AluSx SINE Alu 1 301 -11 1703 195 0 0 chr2 144839370 144839652 -105848202 + AluJb SINE Alu 5 286 -26 226 239 0 75 chr2 144839940 144840007 -105847847 + L2 LINE L2 2723 2784 -530 483 138 23 23 chr2 144840431 144840518 -105847336 + Tigger4(Zombi) DNA MER2_type 2645 2731 0 2443 142 23 9 chr2 144840519 144840955 -105846899 + L1MD1 LINE L1 5801 6242 0 2316 187 53 10 chr2 144841612 144842103 -105845751 + L1MB8 LINE L1 5618 6129 -49 303 253 294 0 chr2 144843891 144844037 -105843817 - MIR SINE MIR -21 241 53 27 29 0 0 chr2 144844178 144844212 -105843642 + AT_rich Low_complexity Low_complexity 1 34 0 280 254 0 0 chr2 144844308 144844367 -105843487 - L2 LINE L2 -5 3308 3250 327 310 123 106 chr2 144845104 144845366 -105842488 - L2 LINE L2 -35 3237 2964 1268 173 33 22 chr2 144845366 144845637 -105842217 + ORSL DNA AcHobo 2 275 0 327 310 123 106 chr2 144845637 144845780 -105842074 - L2 LINE L2 -308 2964 2825 1043 196 50 5 chr2 144845861 144846060 -105841794 - AluJo SINE Alu -18 294 87 610 229 93 34 chr2 144846171 144846376 -105841478 + L1MC5 LINE L1 7719 7935 -26 362 255 82 58 chr2 144846590 144846833 -105841021 + L1MC/D LINE L1 5317 5567 -589 308 78 0 0 chr2 144846934 144846985 -105840869 - MER45R DNA AcHobo -611 970 920 315 71 0 0 chr2 144847014 144847056 -105840798 + (TTC)n Simple_repeat Simple_repeat 1 42 0 548 133 22 0 chr2 144847056 144847146 -105840708 - L1MC1 LINE L1 0 6333 6242 2860 88 20 8 chr2 144847146 144847545 -105840309 + MLT2A1 LTR ERVL 1 404 -40 235 230 27 0 chr2 144847546 144847620 -105840234 - L1MC4 LINE L1 -1353 6689 6614 234 250 0 43 chr2 144847571 144847663 -105840191 + L1MC4 LINE L1 6615 6702 -1340 * 296 145 0 32 chr2 144847664 144847726 -105840128 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 313 296 23 0 chr2 144847728 144847816 -105840038 - L1MC4 LINE L1 -1339 6703 6614 * 338 273 23 0 chr2 144847742 144847830 -105840024 + L1MC4 LINE L1 6614 6703 -1339 334 276 23 0 chr2 144847843 144847930 -105839924 + L1MC4 LINE L1 6615 6703 -1339 198 265 0 0 chr2 144847983 144848051 -105839803 + (TATATG)n Simple_repeat Simple_repeat 2 69 0 313 109 0 18 chr2 144848061 144848116 -105839738 + MLT2A2 LTR ERVL 400 453 0 272 180 0 0 chr2 144848502 144848552 -105839302 + L1 LINE L1 4213 4262 -1884 5975 158 6 23 chr2 144848653 144850551 -105837303 + L1PA16 LINE L1 4307 6166 0 27 29 0 0 chr2 144851343 144851377 -105836477 + AT_rich Low_complexity Low_complexity 1 34 0 316 203 130 0 chr2 144851468 144851537 -105836317 - L2 LINE L2 -4 3268 3191 300 230 54 0 chr2 144851825 144851899 -105835955 - MIR SINE MIR -64 198 121 540 198 35 0 chr2 144852281 144852397 -105835457 + MIR SINE MIR 68 187 -75 393 22 0 0 chr2 144852441 144852487 -105835367 + (TG)n Simple_repeat Simple_repeat 1 46 0 199 191 0 0 chr2 144852578 144852620 -105835234 - MIR SINE MIR -70 192 151 341 320 20 7 chr2 144852899 144853049 -105834805 + L1MC4 LINE L1 7419 7570 -472 180 0 0 0 chr2 144853548 144853568 -105834286 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 197 350 20 50 chr2 144854696 144854796 -105833058 + L2 LINE L2 2997 3093 -179 242 290 16 0 chr2 144854855 144854917 -105832937 + L2 LINE L2 3204 3266 -6 436 242 17 45 chr2 144854918 144855089 -105832765 + L1MC4 LINE L1 7476 7677 -172 21 0 0 0 chr2 144855171 144855192 -105832662 + AT_rich Low_complexity Low_complexity 1 21 0 238 269 74 28 chr2 144855809 144855917 -105831937 - L1MC/D LINE L1 -1882 5926 5814 1632 211 0 0 chr2 144856630 144856933 -105830921 + AluJb SINE Alu 1 303 -9 303 355 115 15 chr2 144857335 144857535 -105830319 + MIR SINE MIR 20 239 -23 1683 169 7 3 chr2 144857566 144857879 -105829975 - AluJo SINE Alu 0 314 1 21 0 0 0 chr2 144857910 144857931 -105829923 + AT_rich Low_complexity Low_complexity 1 21 0 1679 167 33 4 chr2 144857932 144858208 -105829646 - AluJb SINE Alu -26 286 3 3544 244 99 77 chr2 144858583 144858684 -105829170 + HAL1 LINE L1 11 108 -2399 1521 215 6 10 chr2 144858684 144858995 -105828859 + AluJo SINE Alu 1 310 -2 3544 244 99 77 chr2 144858995 144859446 -105828408 + HAL1 LINE L1 108 548 -1959 1957 138 0 51 chr2 144859446 144859757 -105828097 - AluSx SINE Alu -17 295 1 3544 244 99 77 chr2 144859757 144860820 -105827034 + HAL1 LINE L1 548 1662 -845 796 242 113 43 chr2 144860882 144861279 -105826575 + HAL1 LINE L1 1950 2374 -133 386 237 86 26 chr2 144861925 144862077 -105825777 + HAL1 LINE L1 2347 2507 0 658 292 143 5 chr2 144862295 144862511 -105825343 + MIR SINE MIR 14 259 -3 218 268 71 0 chr2 144862798 144862854 -105825000 + MIR SINE MIR 91 150 -112 294 276 86 26 chr2 144862945 144863061 -105824793 + MLT1K LTR MaLR 122 244 -344 276 30 0 0 chr2 144863200 144863233 -105824621 + (TG)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr2 144863818 144863839 -105824015 + AT_rich Low_complexity Low_complexity 1 21 0 41554 41 24 2 chr2 144864464 144870474 -105817380 + L1PA3 LINE L1 15 6155 0 218 306 46 37 chr2 144870872 144870980 -105816874 - L2 LINE L2 -8 3305 3197 777 184 0 0 chr2 144871431 144871556 -105816298 + FLAM_C SINE Alu 1 125 -8 1464 109 45 5 chr2 144871890 144872111 -105815743 - MER30 DNA MER1_type 0 230 1 7772 185 25 17 chr2 144872329 144872663 -105815191 + L1PB4 LINE L1 3155 3485 -2671 1725 160 11 14 chr2 144872663 144872944 -105814910 + AluJb SINE Alu 1 280 -32 203 77 0 26 chr2 144872953 144872992 -105814862 + (CAA)n Simple_repeat Simple_repeat 2 39 0 7772 185 25 17 chr2 144872992 144874304 -105813550 + L1PB4 LINE L1 3492 4792 -1364 1900 146 10 0 chr2 144874304 144874592 -105813262 + AluSx SINE Alu 1 291 -21 7772 185 25 17 chr2 144874592 144875857 -105811997 + L1PB4 LINE L1 4792 6153 -3 2165 72 3 69 chr2 144875939 144876245 -105811609 - AluSp SINE Alu -19 294 9 24 0 0 0 chr2 144876559 144876583 -105811271 + AT_rich Low_complexity Low_complexity 1 24 0 242 286 0 57 chr2 144876615 144876685 -105811169 - L2 LINE L2 0 3313 3248 2026 155 124 5 chr2 144877073 144877453 -105810401 + MSTA LTR MaLR 1 425 -3 474 211 0 0 chr2 144878200 144878276 -105809578 + MER31B LTR ERV1 16 91 -375 463 175 48 10 chr2 144878467 144878570 -105809284 + MER31B-int LTR ERV1 1699 1805 -3131 243 207 5 0 chr2 144878571 144878626 -105809228 + AluJ/monomer SINE Alu 1 39 -262 2098 109 3 3 chr2 144878649 144878942 -105808912 + AluSx SINE Alu 9 301 -11 430 233 14 7 chr2 144879071 144879208 -105808646 + MER31B-int LTR ERV1 1547 2084 -2852 30995 113 11 60 chr2 144879224 144885671 -105802183 + L1PA7 LINE L1 12 6148 -6 1012 189 40 82 chr2 144885680 144886060 -105801794 + MER31B-int LTR ERV1 2099 2462 -2474 861 235 34 20 chr2 144886070 144886530 -105801324 + MER31B-int LTR ERV1 2573 4323 -1623 5000 173 131 101 chr2 144886551 144888041 -105799813 + MER31B-int LTR ERV1 3381 4915 -21 1448 182 149 52 chr2 144888042 144888227 -105799627 + MER31B LTR ERV1 1 167 -299 2424 14 3 14 chr2 144888227 144888538 -105799316 - AluYa5 SINE Alu 0 309 2 1448 182 149 52 chr2 144888538 144888775 -105799079 + MER31B LTR ERV1 167 465 -1 916 272 25 4 chr2 144888927 144889170 -105798684 + MIR SINE MIR 15 262 0 364 179 0 48 chr2 144889599 144889683 -105798171 + MER116 DNA Mariner 1 80 0 227 121 45 45 chr2 144890320 144890386 -105797468 + (TATAA)n Simple_repeat Simple_repeat 4 69 0 1053 179 27 27 chr2 144890474 144890697 -105797157 + AluJb SINE Alu 87 309 -3 198 307 30 30 chr2 144891087 144891188 -105796666 + L2 LINE L2 2653 2753 -561 4558 145 7 7 chr2 144891241 144891952 -105795902 + MER50 LTR ERV1 1 711 -23 445 256 31 8 chr2 144892239 144892368 -105795486 - LTR67 LTR ERVL -15 542 411 517 311 33 92 chr2 144892437 144892742 -105795112 - LTR67 LTR ERVL -269 288 2 220 259 78 78 chr2 144892916 144892969 -105794885 - MER5A DNA MER1_type -14 175 123 2246 97 10 3 chr2 144892969 144893259 -105794595 + AluSq SINE Alu 3 294 -19 220 259 78 78 chr2 144893259 144893321 -105794533 - MER5A DNA MER1_type -65 124 60 2022 135 3 0 chr2 144893892 144894189 -105793665 + AluSx SINE Alu 1 298 -14 2040 209 40 12 chr2 144894706 144895136 -105792718 + L1MB7 LINE L1 9 450 -6409 810 110 29 7 chr2 144895241 144895377 -105792477 + L1MA1 LINE L1 5814 5952 -350 1009 161 0 44 chr2 144895389 144895569 -105792285 + AluJb SINE Alu 12 183 -129 2060 89 38 19 chr2 144895569 144895883 -105791971 + L1MA1 LINE L1 5979 6298 -4 1305 211 31 31 chr2 144895890 144896208 -105791646 - L1M4 LINE L1 -1918 4464 4147 238 277 17 44 chr2 144896413 144896538 -105791316 - L1M4 LINE L1 -4563 1819 1624 796 164 46 73 chr2 144896545 144896764 -105791090 - AluY SINE Alu 0 311 99 3676 206 41 80 chr2 144896865 144897832 -105790022 + L1MB7 LINE L1 471 1400 -5459 2037 112 0 56 chr2 144897832 144898153 -105789701 + AluSx SINE Alu 1 303 -9 451 184 0 0 chr2 144898156 144898259 -105789595 + L1MB7 LINE L1 1521 1623 -5236 1711 225 45 18 chr2 144899617 144900173 -105787681 + L1MB7 LINE L1 1605 2175 -4784 2042 125 3 10 chr2 144900212 144900516 -105787338 + AluSx SINE Alu 1 302 -10 2364 44 0 4 chr2 144900516 144900788 -105787066 + AluY SINE Alu 23 293 -18 1623 225 26 74 chr2 144901398 144902017 -105785837 + L1MB7 LINE L1 5035 5623 -1334 1875 206 15 8 chr2 144902020 144902419 -105785435 + L1MB7 LINE L1 6292 6693 -302 2182 125 0 7 chr2 144902798 144903101 -105784753 + AluSx SINE Alu 1 301 -11 409 213 119 134 chr2 144903307 144903665 -105784189 - L1ME4a LINE L1 -285 5836 5486 2753 7 0 0 chr2 144904641 144904937 -105782917 - AluYa5 SINE Alu -15 296 1 1971 195 20 15 chr2 144905109 144905503 -105782351 + MSTD LTR MaLR 1 396 0 29 47 0 0 chr2 144907141 144907184 -105780670 + AT_rich Low_complexity Low_complexity 1 43 0 781 146 0 23 chr2 144907197 144907327 -105780527 + FLAM_C SINE Alu 1 127 -6 462 262 16 25 chr2 144908092 144908214 -105779640 + L1MC4a LINE L1 5496 5616 -2192 235 250 47 0 chr2 144908207 144908271 -105779583 + L1MD2 LINE L1 6065 6131 -228 * 302 294 80 43 chr2 144908422 144908585 -105779269 - MIR SINE MIR -60 202 34 547 258 56 17 chr2 144908666 144908844 -105779010 + L1MC4a LINE L1 5600 5784 -2024 272 273 26 13 chr2 144909173 144909250 -105778604 + L2 LINE L2 3224 3301 -12 326 266 133 28 chr2 144909347 144909565 -105778289 - L1 LINE L1 -1635 4511 4271 1029 300 53 23 chr2 144909567 144910130 -105777724 - L1 LINE L1 -1911 4235 3656 277 306 176 0 chr2 144910303 144910411 -105777443 + L2 LINE L2 3186 3312 -1 458 295 39 19 chr2 144910493 144910751 -105777103 + L1ME4a LINE L1 5544 5806 -315 304 269 37 46 chr2 144910860 144910968 -105776886 + L1ME4a LINE L1 5957 6063 -58 243 61 0 0 chr2 144911097 144911130 -105776724 + (TG)n Simple_repeat Simple_repeat 2 34 0 461 275 50 0 chr2 144911517 144911637 -105776217 + LTR67 LTR ERVL 432 557 0 545 241 15 23 chr2 144911708 144911841 -105776013 + MIR SINE MIR 8 139 -123 622 216 24 0 chr2 144911869 144911994 -105775860 - FLAM_C SINE Alu -5 138 11 347 368 153 17 chr2 144912952 144913417 -105774437 + L2 LINE L2 2243 2770 -544 459 222 20 191 chr2 144913458 144913710 -105774144 + MIR SINE MIR 4 212 -50 208 319 14 42 chr2 144913744 144913816 -105774038 + MIR SINE MIR 82 151 -111 9386 118 40 26 chr2 144913936 144915484 -105772370 + Tigger1 DNA MER2_type 22 1591 -827 4150 133 10 16 chr2 144915627 144916304 -105771550 + Tigger1 DNA MER2_type 1577 2249 -169 2280 131 53 0 chr2 144916307 144916644 -105771210 + LTR18A LTR ERVL 1 355 -2 988 218 0 0 chr2 144916661 144916835 -105771019 + HERVL18 LTR ERVL 10 183 -5864 * 1191 184 18 9 chr2 144916822 144917039 -105770815 - HERVL18 LTR ERVL -1393 4654 4436 488 228 57 42 chr2 144917148 144917341 -105770513 + L1MC4a LINE L1 5855 6050 -1758 295 319 90 7 chr2 144918139 144918291 -105769563 - MIR SINE MIR -62 146 20 25 65 0 0 chr2 144918530 144918576 -105769278 + AT_rich Low_complexity Low_complexity 1 46 0 191 167 24 0 chr2 144918700 144918742 -105769112 + (TA)n Simple_repeat Simple_repeat 2 44 0 324 329 158 0 chr2 144918777 144918923 -105768931 - MIR SINE MIR -71 191 23 203 250 0 77 chr2 144919746 144919850 -105768004 + A-rich Low_complexity Low_complexity 2 97 0 251 283 56 15 chr2 144919859 144920057 -105767797 + L1MEd LINE L1 980 1185 -5020 235 328 80 28 chr2 144920220 144920507 -105767347 + HAL1 LINE L1 1373 1674 -833 1774 174 6 3 chr2 144920555 144920866 -105766988 + AluJb SINE Alu 1 312 0 279 93 0 0 chr2 144921110 144921153 -105766701 + (T)n Simple_repeat Simple_repeat 1 43 0 366 289 95 46 chr2 144921165 144921337 -105766517 + L1MEd LINE L1 2072 2234 -3981 987 167 12 6 chr2 144921337 144921505 -105766349 + FAM SINE Alu 1 169 -6 366 289 95 46 chr2 144921505 144921696 -105766158 + L1MEd LINE L1 2234 2396 -3819 418 132 0 0 chr2 144921697 144921765 -105766089 + MLT2B3 LTR ERVL 1 68 -486 1618 163 17 14 chr2 144921841 144922129 -105765725 - AluJo SINE Alu -18 294 6 2454 186 25 35 chr2 144922170 144922654 -105765200 + MLT2B3 LTR ERVL 76 554 0 314 273 69 62 chr2 144922781 144923070 -105764784 + L1MEd LINE L1 2581 2871 -3344 1381 224 34 2 chr2 144923078 144923406 -105764448 + L1ME1 LINE L1 5838 6332 -2 400 136 0 30 chr2 144923715 144923781 -105764073 + FLAM SINE Alu 60 123 -10 829 271 78 13 chr2 144924555 144924942 -105762912 + L1MC4 LINE L1 7629 8040 -2 1622 195 0 26 chr2 144924948 144925255 -105762599 - AluJo SINE Alu -13 299 1 33 56 0 0 chr2 144925352 144925406 -105762448 + AT_rich Low_complexity Low_complexity 1 54 0 2038 181 27 7 chr2 144925528 144925932 -105761922 + MLT2D LTR ERVL 1 412 -2 266 274 119 60 chr2 144925936 144926255 -105761599 + HAL1 LINE L1 1202 1556 -951 2330 99 0 26 chr2 144926255 144926567 -105761287 + AluSq SINE Alu 2 305 -8 266 274 119 60 chr2 144926567 144926693 -105761161 + HAL1 LINE L1 1556 1673 -834 1281 70 12 0 chr2 144926879 144927051 -105760803 + L1PA7 LINE L1 5978 6151 -3 1899 206 34 96 chr2 144927442 144928179 -105759675 - LTR8 LTR ERV1 0 691 1 5388 146 32 17 chr2 144928454 144929614 -105758240 + L1MA8 LINE L1 5107 6287 -4 2081 133 7 0 chr2 144930595 144930896 -105756958 + AluSx SINE Alu 1 303 -9 669 310 104 30 chr2 144931166 144931876 -105755978 + HAL1 LINE L1 922 1684 -823 404 287 86 33 chr2 144931931 144932175 -105755679 + L1 LINE L1 2992 3248 -2898 408 261 68 57 chr2 144932295 144932471 -105755383 - L2 LINE L2 0 3313 3136 24 32 0 0 chr2 144932492 144932523 -105755331 + AT_rich Low_complexity Low_complexity 1 31 0 565 208 8 15 chr2 144932906 144933036 -105754818 + FLAM_C SINE Alu 5 133 -10 1605 189 0 3 chr2 144933060 144933345 -105754509 + AluJb SINE Alu 28 311 -1 313 277 30 10 chr2 144933476 144933577 -105754277 + L1 LINE L1 4932 5034 -1112 23 68 0 0 chr2 144933602 144933646 -105754208 + AT_rich Low_complexity Low_complexity 1 44 0 29617 152 7 8 chr2 144934181 144938713 -105749141 + HERVL18 LTR ERVL 1520 6047 0 2490 94 53 3 chr2 144938715 144939054 -105748800 + LTR18A LTR ERVL 2 357 0 998 154 0 6 chr2 144939065 144939227 -105748627 + Tigger1 DNA MER2_type 2258 2418 0 189 320 0 0 chr2 144939402 144939477 -105748377 + MIR SINE MIR 185 259 -3 1713 176 0 0 chr2 144939849 144940116 -105747738 + AluJb SINE Alu 1 267 -45 1608 186 14 7 chr2 144940221 144940516 -105747338 - AluJo SINE Alu -13 299 3 263 222 0 0 chr2 144940634 144940688 -105747166 - MER20B DNA MER1_type -694 89 36 200 290 32 32 chr2 144941587 144941680 -105746174 - L2 LINE L2 -1 3312 3220 22 0 0 0 chr2 144941712 144941734 -105746120 + AT_rich Low_complexity Low_complexity 1 22 0 438 263 125 70 chr2 144941797 144942045 -105745809 + MIR SINE MIR 2 256 -6 2054 93 67 7 chr2 144942258 144942590 -105745264 - L1PA13 LINE L1 -21 6140 5800 804 188 135 5 chr2 144942726 144942918 -105744936 - MER20 DNA MER1_type -2 217 1 622 284 138 40 chr2 144943418 144944013 -105743841 - L1M4 LINE L1 -810 5336 4684 579 319 87 43 chr2 144944045 144944577 -105743277 - L1MEd LINE L1 -5285 834 280 28 0 0 0 chr2 144945052 144945080 -105742774 + AT_rich Low_complexity Low_complexity 1 28 0 345 207 136 29 chr2 144945610 144945750 -105742104 + HAL1 LINE L1 2047 2201 -306 2190 114 17 0 chr2 144945911 144946210 -105741644 - AluSg SINE Alu -6 304 1 283 298 129 28 chr2 144946444 144946622 -105741232 + MIR SINE MIR 53 248 -14 205 230 162 14 chr2 144946738 144946812 -105741042 - MIR SINE MIR -105 157 73 865 174 0 60 chr2 144947096 144947263 -105740591 - AluJ SINE Alu -24 288 132 1439 99 0 5 chr2 144947280 144947472 -105740382 + AluSg/x SINE Alu 107 297 -13 838 120 8 0 chr2 144947472 144947589 -105740265 - AluJ SINE Alu -188 124 7 585 221 35 0 chr2 144947971 144948084 -105739770 + L2 LINE L2 3193 3309 -4 451 250 83 0 chr2 144948421 144948529 -105739325 - MIR SINE MIR -54 208 92 266 137 98 0 chr2 144948675 144948726 -105739128 - L2 LINE L2 -3 3310 3255 21 0 0 0 chr2 144949129 144949150 -105738704 + AT_rich Low_complexity Low_complexity 1 21 0 373 314 114 11 chr2 144950511 144950686 -105737168 - MIR SINE MIR -36 226 34 681 287 54 87 chr2 144950783 144951208 -105736646 + L1ME LINE L1 43 453 -5617 451 221 89 146 chr2 144951430 144951973 -105735881 + L1ME LINE L1 526 992 -5078 1520 164 34 65 chr2 144952149 144952269 -105735585 + AluJo SINE Alu 1 123 -189 4313 54 0 2 chr2 144952269 144952803 -105735051 - L1PA5 LINE L1 0 6154 5622 1520 164 34 65 chr2 144952803 144952975 -105734879 + AluJo SINE Alu 123 284 -28 297 0 0 0 chr2 144952979 144953012 -105734842 + (TG)n Simple_repeat Simple_repeat 2 34 0 240 185 0 0 chr2 144953613 144953667 -105734187 + (CA)n Simple_repeat Simple_repeat 2 55 0 24 0 0 0 chr2 144953678 144953702 -105734152 + AT_rich Low_complexity Low_complexity 1 24 0 2019 181 86 12 chr2 144953708 144954140 -105733714 + MLT1C LTR MaLR 2 465 -2 401 270 97 75 chr2 144954657 144954883 -105732971 - MIR SINE MIR -14 248 18 8935 146 24 28 chr2 144954887 144956436 -105731418 + Tigger1 DNA MER2_type 2 1543 -875 1414 158 108 58 chr2 144956455 144956606 -105731248 + Tigger1 DNA MER2_type 2039 2181 -237 1886 151 0 0 chr2 144956606 144956878 -105730976 + AluJb SINE Alu 11 282 -30 1414 158 108 58 chr2 144956878 144957088 -105730766 + Tigger1 DNA MER2_type 2181 2418 0 1107 186 5 0 chr2 144957526 144957720 -105730134 - MER2 DNA MER2_type -144 201 7 25 0 0 0 chr2 144957834 144957859 -105729995 + AT_rich Low_complexity Low_complexity 1 25 0 480 290 21 28 chr2 144957912 144958057 -105729797 + L3b LINE CR1 1367 1510 -73 325 319 109 7 chr2 144959638 144959776 -105728078 - MIR3 SINE MIR -45 163 12 809 241 14 45 chr2 144959996 144960216 -105727638 + AluJo SINE Alu 86 298 -14 541 277 54 112 chr2 144960348 144960841 -105727013 + L2 LINE L2 2670 3156 -157 531 206 35 106 chr2 144960857 144961056 -105726798 - MER46C DNA MER2_type -29 309 125 18450 97 12 8 chr2 144961059 144962781 -105725073 + L1HS LINE L1 17 1731 -5843 228 35 0 0 chr2 144962781 144962810 -105725044 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 18450 97 12 8 chr2 144962810 144966582 -105721272 + L1HS LINE L1 1731 7574 0 488 201 37 0 chr2 144966578 144966712 -105721142 + L1MEc LINE L1 2153 2291 -4105 * 639 192 122 6 chr2 144966755 144966911 -105720943 - MER58B DNA MER1_type 0 341 168 2627 239 43 1 chr2 144966961 144967725 -105720129 + L1MEc LINE L1 2291 3086 -3129 503 259 119 5 chr2 144967854 144968055 -105719799 - HAL1 LINE L1 -627 1880 1657 850 275 125 12 chr2 144968777 144969207 -105718647 + MLT1G1 LTR MaLR 1 540 -55 295 274 106 9 chr2 144969246 144969359 -105718495 + MER103 DNA DNA 12 135 -31 351 283 220 0 chr2 144969424 144969601 -105718253 - L1ME LINE L1 -297 5824 5609 1055 173 0 16 chr2 144969813 144970004 -105717850 - AluJb SINE Alu -120 192 5 233 295 48 19 chr2 144970111 144970216 -105717638 - HAL1b LINE L1 -475 873 766 6606 60 18 4 chr2 144970228 144971071 -105716783 - L1PA8 LINE L1 -6 6166 5312 * 6961 87 1 36 chr2 144971070 144972259 -105715595 - L1P3 LINE L1 -671 5483 4342 492 270 45 134 chr2 144972303 144972722 -105715132 + L2 LINE L2 2930 3311 -2 262 307 168 30 chr2 144972944 144973146 -105714708 - HAL1 LINE L1 -662 1845 1616 645 235 165 50 chr2 144973451 144973893 -105713961 - HAL1 LINE L1 -892 1615 1123 226 270 110 0 chr2 144974219 144974319 -105713535 - HAL1 LINE L1 -2396 111 1 1220 146 22 90 chr2 144974619 144974941 -105712913 + AluJb SINE Alu 1 300 -2 2087 123 0 17 chr2 144975113 144975414 -105712440 + AluSx SINE Alu 5 300 -12 21 71 0 0 chr2 144976950 144976992 -105710862 + AT_rich Low_complexity Low_complexity 1 42 0 2025 138 0 13 chr2 144977195 144977507 -105710347 + AluSg SINE Alu 1 308 -2 30735 117 9 57 chr2 144977848 144979367 -105708487 + L1PA7 LINE L1 1 1592 -4877 2311 78 0 3 chr2 144979367 144979662 -105708192 - AluY SINE Alu -17 294 1 30735 117 9 57 chr2 144979662 144984613 -105703241 + L1PA7 LINE L1 1592 6469 0 30 27 0 0 chr2 144984615 144984652 -105703202 + AT_rich Low_complexity Low_complexity 1 37 0 3111 207 104 52 chr2 144984755 144985779 -105702075 + L1MC4 LINE L1 6965 8042 0 1594 178 30 0 chr2 144986604 144986909 -105700945 - AluSx SINE Alu 0 319 7 181 274 129 16 chr2 144988075 144988137 -105699717 - L2 LINE L2 -36 3236 3168 24 0 0 0 chr2 144989373 144989397 -105698457 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 144989751 144989775 -105698079 + AT_rich Low_complexity Low_complexity 1 24 0 1145 115 175 0 chr2 144990036 144990236 -105697618 + MER46A DNA MER2_type 1 235 -1 330 26 0 0 chr2 144990364 144990403 -105697451 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr2 144990987 144991009 -105696845 + AT_rich Low_complexity Low_complexity 1 22 0 247 359 10 10 chr2 144991710 144991813 -105696041 - LTR67 LTR ERVL -419 138 36 848 195 12 18 chr2 144992066 144992230 -105695624 - MER20 DNA MER1_type -1 218 56 407 261 36 18 chr2 144992247 144992358 -105695496 + L1ME3A LINE L1 6021 6133 -37 2536 61 0 0 chr2 144992382 144992693 -105695161 - AluY SINE Alu 0 311 1 349 100 0 0 chr2 144992786 144992836 -105695018 - MLT2A2 LTR ERVL 0 453 404 334 111 70 18 chr2 144992841 144993012 -105694842 + (TA)n Simple_repeat Simple_repeat 1 180 0 197 73 0 73 chr2 144993128 144993169 -105694685 + (TA)n Simple_repeat Simple_repeat 2 39 0 3032 83 30 0 chr2 144993195 144993591 -105694263 - MLT2A2 LTR ERVL -45 408 1 548 271 81 56 chr2 144995036 144995746 -105692108 + L1MEd LINE L1 977 1693 -4436 461 287 119 11 chr2 144996140 144996401 -105691453 + L1MEd LINE L1 2232 2520 -3609 325 270 133 30 chr2 144996424 144996657 -105691197 + L1MEd LINE L1 2633 2889 -3240 38562 38 4 1 chr2 144996730 145002250 -105685604 + L1PA4 LINE L1 620 6155 0 1254 279 107 64 chr2 145002249 145002563 -105685291 + L1MEd LINE L1 3011 3310 -2819 * 2791 3 0 3 chr2 145002563 145002873 -105684981 + AluYa5 SINE Alu 1 309 -2 1254 279 107 64 chr2 145002873 145004271 -105683583 + L1MEd LINE L1 3310 4798 -1331 1416 191 3 21 chr2 145004665 145004948 -105682906 - MLT1B LTR MaLR 0 390 113 4993 159 22 29 chr2 145004973 145005313 -105682541 - L1PA16 LINE L1 -18 6148 5807 342 0 0 0 chr2 145005313 145005351 -105682503 + (TG)n Simple_repeat Simple_repeat 2 39 0 4993 159 22 29 chr2 145005351 145006414 -105681440 - L1PA16 LINE L1 -359 5807 4752 385 171 125 0 chr2 145006416 145006504 -105681350 - MLT1B LTR MaLR -265 125 27 195 162 0 0 chr2 145006518 145006555 -105681299 + (TA)n Simple_repeat Simple_repeat 1 37 0 304 294 0 22 chr2 145006563 145006655 -105681199 + L1MC4 LINE L1 6614 6703 -1339 195 42 0 0 chr2 145006656 145006680 -105681174 + (TA)n Simple_repeat Simple_repeat 1 24 0 1617 154 55 0 chr2 145006681 145006953 -105680901 - AluJb SINE Alu -25 287 1 22 56 0 0 chr2 145006958 145006994 -105680860 + AT_rich Low_complexity Low_complexity 1 36 0 299 344 43 32 chr2 145008429 145008615 -105679239 + MER5A DNA MER1_type 1 188 -1 24 0 0 0 chr2 145008949 145008973 -105678881 + AT_rich Low_complexity Low_complexity 1 24 0 670 289 49 67 chr2 145010246 145010962 -105676892 - L1M4 LINE L1 -2451 3695 2993 682 191 40 0 chr2 145011519 145011671 -105676183 - AluSg/x SINE Alu -11 299 142 7238 41 5 0 chr2 145011910 145012807 -105675047 + L1PA4 LINE L1 5255 6155 0 14989 156 30 15 chr2 145012807 145014258 -105673596 + L1MA2 LINE L1 2486 3914 -3809 1921 126 6 55 chr2 145014258 145014583 -105673271 + AluSx SINE Alu 1 309 -3 14989 156 30 15 chr2 145014583 145016246 -105671608 + L1MA2 LINE L1 3914 5551 -2172 186 43 0 0 chr2 145016246 145016269 -105671585 + (CA)n Simple_repeat Simple_repeat 2 24 0 14989 156 30 15 chr2 145016269 145018306 -105669548 + L1MA2 LINE L1 5551 7723 0 357 199 96 103 chr2 145018310 145018446 -105669408 - MER46C DNA MER2_type -199 139 5 377 296 134 0 chr2 145018448 145018590 -105669264 + L2 LINE L2 3153 3313 0 27 0 0 0 chr2 145018682 145018709 -105669145 + AT_rich Low_complexity Low_complexity 1 27 0 188 283 50 0 chr2 145018946 145019006 -105668848 + MIR3 SINE MIR 106 168 -40 417 132 0 26 chr2 145019117 145019193 -105668661 - L1 LINE L1 -1386 4760 4687 576 228 0 0 chr2 145019372 145019473 -105668381 + Tigger3b DNA MER2_type 2 102 -1129 * 5283 116 87 6 chr2 145019471 145020033 -105667821 + Tigger3b DNA MER2_type 274 936 -2092 203 61 30 0 chr2 145020033 145020066 -105667788 + (CTCA)n Simple_repeat Simple_repeat 1 34 0 5283 116 87 6 chr2 145020066 145020389 -105667465 + Tigger3b DNA MER2_type 936 1231 0 218 329 14 14 chr2 145020730 145020803 -105667051 - MIR SINE MIR -188 74 2 649 66 0 11 chr2 145020964 145021055 -105666799 - HERVH LTR ERV1 -5439 2274 2185 193 267 0 67 chr2 145022199 145022274 -105665580 + MIR SINE MIR 102 171 -91 1333 198 72 25 chr2 145023096 145023374 -105664480 + AluJo SINE Alu 1 291 -21 243 79 0 0 chr2 145023396 145023434 -105664420 + (CAAAAA)n Simple_repeat Simple_repeat 1 38 0 360 216 108 45 chr2 145023613 145023724 -105664130 - L2 LINE L2 -19 3294 3177 1343 208 76 3 chr2 145024434 145024751 -105663103 + MER58B DNA MER1_type 1 340 -1 24 32 0 0 chr2 145025566 145025597 -105662257 + AT_rich Low_complexity Low_complexity 1 31 0 338 197 13 26 chr2 145026209 145026285 -105661569 - MER46C DNA MER2_type -9 329 255 1886 187 39 12 chr2 145026444 145026850 -105661004 + L1MB7 LINE L1 5763 6179 -5 1819 162 3 14 chr2 145026875 145027165 -105660689 + AluJb SINE Alu 6 292 -20 21 0 0 0 chr2 145027329 145027350 -105660504 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr2 145027724 145027750 -105660104 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 31 58 0 0 chr2 145028410 145028462 -105659392 + AT_rich Low_complexity Low_complexity 1 52 0 2261 157 56 12 chr2 145028922 145029330 -105658524 + MSTB LTR MaLR 1 426 0 1534 188 55 47 chr2 145029331 145029693 -105658161 - MLT1A1 LTR MaLR 0 365 1 1832 139 0 18 chr2 145030362 145030643 -105657211 + AluSx SINE Alu 1 276 -36 264 59 0 0 chr2 145030652 145030686 -105657168 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 765 203 51 46 chr2 145030817 145031014 -105656840 + MLT1D LTR MaLR 308 505 0 281 303 90 6 chr2 145031169 145031347 -105656507 - L1 LINE L1 -1915 4231 4039 795 302 61 39 chr2 145031539 145031979 -105655875 + LTR38 LTR ERV1 96 545 -11 1673 126 72 3 chr2 145032287 145032580 -105655274 + L1MA4 LINE L1 5981 6293 -7 221 224 20 0 chr2 145032711 145032760 -105655094 + (TA)n Simple_repeat Simple_repeat 1 50 0 1514 135 73 8 chr2 145032780 145033039 -105654815 - AluJb SINE Alu -16 296 21 738 173 8 0 chr2 145033041 145033174 -105654680 - AluJb SINE Alu -178 134 1 2007 94 3 44 chr2 145033545 145033842 -105654012 + AluSx SINE Alu 18 302 -10 852 276 130 35 chr2 145033964 145034450 -105653404 - HAL1b LINE L1 -569 779 248 24 0 0 0 chr2 145034451 145034475 -105653379 + AT_rich Low_complexity Low_complexity 1 24 0 225 259 35 0 chr2 145034819 145034877 -105652977 + CT-rich Low_complexity Low_complexity 4 63 0 340 309 139 21 chr2 145035531 145035725 -105652129 - L1M4 LINE L1 -757 5389 5173 1402 131 5 9 chr2 145035796 145036010 -105651844 - AluSg/x SINE Alu -13 299 87 791 171 0 0 chr2 145036043 145036172 -105651682 - FLAM_C SINE Alu -4 129 1 1018 288 57 49 chr2 145036263 145036812 -105651042 + L2 LINE L2 2712 3258 -55 2339 217 66 41 chr2 145036812 145037898 -105649956 + LTR27 LTR ERV1 2 636 0 2264 102 0 7 chr2 145038204 145038508 -105649346 - AluY SINE Alu -9 302 1 425 312 146 10 chr2 145038632 145038837 -105649017 - L2 LINE L2 -89 3224 2992 406 318 50 10 chr2 145038842 145039040 -105648814 + MARNA DNA Mariner 374 579 -7 1754 163 35 3 chr2 145039142 145039431 -105648423 - AluJb SINE Alu -14 298 1 1247 187 19 11 chr2 145039575 145039886 -105647968 + MLT2C1 LTR ERVL 1 345 -52 360 155 10 31 chr2 145039886 145039983 -105647871 + (CATATA)n Simple_repeat Simple_repeat 4 98 0 239 89 107 89 chr2 145039983 145040039 -105647815 + MLT2C1 LTR ERVL 464 520 0 402 258 104 49 chr2 145040459 145040622 -105647232 - MIR SINE MIR -48 214 43 365 299 198 0 chr2 145040826 145040837 -105647017 + L1ME LINE L1 5589 5597 -524 2011 118 0 4 chr2 145040837 145041117 -105646737 + AluSq SINE Alu 35 313 0 365 299 198 0 chr2 145041117 145041302 -105646552 + L1ME LINE L1 5597 5824 -297 295 274 106 9 chr2 145041367 145041480 -105646374 - MER103 DNA DNA -31 135 12 850 275 125 12 chr2 145041519 145041949 -105645905 - MLT1G1 LTR MaLR -55 540 1 503 259 119 5 chr2 145042671 145042872 -105644982 + HAL1 LINE L1 1657 1880 -627 2630 239 43 1 chr2 145043001 145043765 -105644089 - L1MEc LINE L1 -3129 3086 2291 639 192 122 6 chr2 145043815 145043971 -105643883 + MER58B DNA MER1_type 168 341 0 488 201 37 0 chr2 145044014 145044148 -105643706 - L1MEc LINE L1 -4105 2291 2153 * 43019 32 21 1 chr2 145044144 145050172 -105637682 - L1HS LINE L1 0 6155 3 601 244 25 38 chr2 145050144 145050214 -105637640 - L1MEc LINE L1 -4190 2137 2068 * 1750 181 13 0 chr2 145050214 145050513 -105637341 - AluJb SINE Alu -9 303 1 601 244 25 38 chr2 145050513 145050680 -105637174 - L1MEc LINE L1 -4259 2068 1903 1100 196 53 0 chr2 145050683 145050892 -105636962 - MER46A DNA MER2_type -16 220 1 1154 261 114 60 chr2 145050892 145051680 -105636174 - L1MEc LINE L1 -4428 1968 1101 876 203 6 6 chr2 145051680 145051843 -105636011 - FAM SINE Alu -12 163 1 1154 261 114 60 chr2 145051843 145052163 -105635691 - L1MEc LINE L1 -5295 1101 800 1713 124 193 3 chr2 145052505 145052811 -105635043 - THE1B LTR MaLR 0 364 1 301 267 0 0 chr2 145052999 145053089 -105634765 + L1MEc LINE L1 801 890 -5506 1157 162 64 39 chr2 145053090 145053294 -105634560 - AluJo SINE Alu -100 212 4 284 257 106 0 chr2 145053429 145053535 -105634319 - L1MC/D LINE L1 -470 5651 5551 446 278 102 69 chr2 145054245 145054604 -105633250 + L1MEc LINE L1 842 1293 -1283 1749 152 35 3 chr2 145054604 145054893 -105632961 + AluSx SINE Alu 1 298 -14 446 278 102 69 chr2 145054893 145054924 -105632930 + L1MEc LINE L1 1293 1322 -1254 37 0 0 0 chr2 145054949 145054986 -105632868 + AT_rich Low_complexity Low_complexity 1 37 0 630 307 104 40 chr2 145056209 145057063 -105630791 + L1ME LINE L1 3447 4351 -1795 301 309 66 23 chr2 145057218 145057588 -105630266 + L1ME LINE L1 5299 5687 -483 328 225 54 39 chr2 145057834 145057963 -105629891 + L1MC5 LINE L1 7796 7926 -35 21 0 0 0 chr2 145058098 145058119 -105629735 + AT_rich Low_complexity Low_complexity 1 21 0 890 210 0 0 chr2 145058222 145058384 -105629470 + AluJb SINE Alu 137 298 -14 587 252 0 8 chr2 145058415 145058542 -105629312 + FLAM_A SINE Alu 1 126 -7 252 86 0 0 chr2 145058543 145058578 -105629276 + (TA)n Simple_repeat Simple_repeat 1 35 0 405 246 123 35 chr2 145058974 145059145 -105628709 + Charlie8 DNA MER1_type 84 269 -2148 2500 37 0 3 chr2 145059546 145059844 -105628010 - AluY SINE Alu -14 297 1 546 187 0 0 chr2 145060906 145061013 -105626841 - FLAM_A SINE Alu -6 136 30 301 333 32 24 chr2 145061105 145061231 -105626623 - MER5B DNA MER1_type -6 172 46 180 347 91 0 chr2 145061492 145061613 -105626241 - MER5A DNA MER1_type -3 186 55 22 0 0 0 chr2 145062018 145062040 -105625814 + AT_rich Low_complexity Low_complexity 1 22 0 2293 110 0 13 chr2 145062209 145062518 -105625336 + AluSx SINE Alu 2 306 -6 539 191 146 136 chr2 145063018 145063238 -105624616 - MIR SINE MIR 0 262 41 689 218 32 5 chr2 145063679 145063867 -105623987 - L1MA7 LINE L1 -21 6270 6078 * 4563 172 28 26 chr2 145063849 145065166 -105622688 - L1MA7 LINE L1 -518 5773 4449 558 198 0 9 chr2 145065179 145065290 -105622564 - AluJo SINE Alu -13 299 190 7127 179 83 16 chr2 145065292 145066753 -105621101 - MER52A LTR ERV1 -2 1753 195 301 289 0 0 chr2 145066754 145066830 -105621024 - MER52A LTR ERV1 -1679 76 1 1043 193 0 11 chr2 145066836 145067023 -105620831 - AluJo SINE Alu -125 187 3 5687 158 39 5 chr2 145067025 145068125 -105619729 - L1MA7 LINE L1 -1719 4427 3290 2607 43 0 0 chr2 145068719 145069021 -105618833 + AluY SINE Alu 1 302 -9 360 114 13 25 chr2 145069921 145070000 -105617854 + (TA)n Simple_repeat Simple_repeat 2 79 0 1014 178 6 11 chr2 145070146 145070320 -105617534 - AluJb SINE Alu -5 307 135 21 71 0 0 chr2 145071664 145071706 -105616148 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 145073343 145073364 -105614490 + AT_rich Low_complexity Low_complexity 1 21 0 292 221 39 0 chr2 145073506 145073583 -105614271 - MER116 DNA Mariner 0 80 1 803 137 14 14 chr2 145074042 145074181 -105613673 + MSTC LTR MaLR 290 428 0 240 270 157 9 chr2 145074750 145074865 -105612989 + MIR SINE MIR 107 238 -24 697 240 25 109 chr2 145075124 145075201 -105612653 - MIR SINE MIR -3 259 177 2028 111 24 3 chr2 145075201 145075490 -105612364 + AluSp SINE Alu 1 295 -18 697 240 25 109 chr2 145075490 145075695 -105612159 - MIR SINE MIR -85 177 1 890 269 67 13 chr2 145076528 145076826 -105611028 - LTR16C LTR ERVL 0 491 178 2289 87 3 0 chr2 145078511 145078799 -105609055 - AluSg SINE Alu -21 289 1 280 229 14 14 chr2 145078824 145078894 -105608960 - MER5B DNA MER1_type -108 70 1 266 280 147 0 chr2 145078930 145079005 -105608849 + MER117 DNA MER1_type 6 91 -106 254 265 103 0 chr2 145079016 145079084 -105608770 + MIR SINE MIR 40 114 -148 956 132 0 14 chr2 145079335 145079617 -105608237 + AluJb SINE Alu 5 284 0 360 337 80 6 chr2 145079730 145079893 -105607961 + MIR SINE MIR 23 197 -65 2351 80 0 10 chr2 145079895 145080209 -105607645 + AluY SINE Alu 1 311 0 818 259 69 50 chr2 145080632 145080874 -105606980 - L1ME4a LINE L1 -224 5897 5644 819 117 0 0 chr2 145080874 145080994 -105606860 - L1MB5 LINE L1 -9 6165 6046 818 259 69 50 chr2 145080994 145081130 -105606724 - L1ME4a LINE L1 -477 5644 5512 1667 57 0 0 chr2 145081568 145081779 -105606075 + L1PA7 LINE L1 5944 6154 0 21 0 0 0 chr2 145081835 145081856 -105605998 + AT_rich Low_complexity Low_complexity 1 21 0 339 368 15 7 chr2 145081937 145082073 -105605781 - L2 LINE L2 -13 3300 3164 414 366 80 62 chr2 145082204 145082641 -105605213 - L2 LINE L2 -19 3253 2809 451 376 97 30 chr2 145082816 145083249 -105604605 + L2 LINE L2 2808 3269 -3 1248 269 91 25 chr2 145083484 145083958 -105603896 + L2 LINE L2 2800 3301 -12 37513 41 29 0 chr2 145083960 145088640 -105599214 + L1PA2 LINE L1 3 4819 -1327 7709 20 1 0 chr2 145088740 145089871 -105597983 + L1PA2 LINE L1 5022 6153 -2 30 27 0 0 chr2 145089871 145089908 -105597946 + AT_rich Low_complexity Low_complexity 1 37 0 207 270 0 16 chr2 145089969 145090032 -105597822 - L2 LINE L2 -945 2369 2308 268 248 8 0 chr2 145090223 145090275 -105597579 + MER5A DNA MER1_type 50 115 -74 4922 229 52 67 chr2 145090279 145091272 -105596582 + L1M4 LINE L1 67 1073 -5547 1980 125 11 0 chr2 145091272 145091595 -105596259 + AluSx SINE Alu 1 326 0 4922 229 52 67 chr2 145091595 145092275 -105595579 + L1M4 LINE L1 1073 1709 -4911 1321 186 102 18 chr2 145092275 145092550 -105595304 + AluJb SINE Alu 1 298 -14 4922 229 52 67 chr2 145092550 145092628 -105595226 + L1M4 LINE L1 1709 1787 -4833 14266 48 33 0 chr2 145092807 145095332 -105592522 + L1PA5 LINE L1 3597 6150 -4 485 277 43 32 chr2 145095336 145095524 -105592330 - HAL1 LINE L1 0 2507 2318 435 157 0 0 chr2 145095525 145095595 -105592259 - MER6B DNA MER2_type -8 202 133 * 578 154 96 0 chr2 145095581 145095685 -105592169 - MER6B DNA MER2_type -162 114 1 1907 262 132 39 chr2 145095690 145096805 -105591049 - HAL1 LINE L1 -193 2314 1096 27 20 0 41 chr2 145096811 145096834 -105591020 + AT_rich Low_complexity Low_complexity 1 23 -24 790 218 7 0 chr2 145096834 145096981 -105590873 - FRAM SINE Alu -18 148 1 27 20 0 41 chr2 145096981 145097006 -105590848 + AT_rich Low_complexity Low_complexity 23 47 0 952 184 6 0 chr2 145097008 145097166 -105590688 - FRAM SINE Alu -18 158 1 23 0 0 0 chr2 145097218 145097241 -105590613 + AT_rich Low_complexity Low_complexity 1 23 0 248 266 122 80 chr2 145097280 145097468 -105590386 - HAL1 LINE L1 -1575 932 737 1577 181 3 35 chr2 145097740 145098050 -105589804 + AluJb SINE Alu 1 300 -12 385 340 76 7 chr2 145098636 145098780 -105589074 + MIR3 SINE MIR 17 170 -38 2243 78 3 32 chr2 145099301 145099609 -105588245 + AluSp SINE Alu 1 299 -14 242 298 116 33 chr2 145100039 145100220 -105587634 + L2 LINE L2 2452 2647 -667 254 308 33 33 chr2 145100470 145100590 -105587264 + MIR SINE MIR 86 205 -57 2137 140 9 9 chr2 145100789 145101132 -105586722 - MER7A DNA MER2_type -3 343 3 698 165 9 0 chr2 145101219 145101334 -105586520 - FLAM_C SINE Alu -17 116 1 2233 112 3 0 chr2 145101751 145102047 -105585807 + AluSp SINE Alu 1 297 -16 24 53 0 0 chr2 145103665 145103703 -105584151 + AT_rich Low_complexity Low_complexity 1 38 0 408 295 89 71 chr2 145103824 145104285 -105583569 + HAL1b LINE L1 276 673 -675 385 62 31 0 chr2 145104891 145104956 -105582898 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 27 49 0 0 chr2 145105197 145105238 -105582616 + AT_rich Low_complexity Low_complexity 1 41 0 2179 92 7 3 chr2 145105279 145105595 -105582259 - AluSq SINE Alu 0 317 1 369 62 0 0 chr2 145106768 145106816 -105581038 + (TA)n Simple_repeat Simple_repeat 1 48 0 382 290 107 0 chr2 145106950 145107081 -105580773 - MIR SINE MIR -13 249 105 1662 166 7 14 chr2 145107426 145107715 -105580139 - AluJo SINE Alu -15 297 11 196 371 41 10 chr2 145107793 145107890 -105579964 - L2 LINE L2 0 3272 3173 27 0 0 0 chr2 145108904 145108931 -105578923 + AT_rich Low_complexity Low_complexity 1 27 0 2081 124 3 7 chr2 145109616 145109922 -105577932 - AluSx SINE Alu -5 307 3 186 133 0 0 chr2 145110394 145110424 -105577430 + (CATA)n Simple_repeat Simple_repeat 2 31 0 204 356 58 11 chr2 145110614 145110701 -105577153 + MIR3 SINE MIR 9 99 -109 6399 90 17 1 chr2 145110876 145111908 -105575946 + L1PA11 LINE L1 5123 6169 -5 1753 79 43 4 chr2 145111908 145112162 -105575692 + AluY SINE Alu 39 302 -9 1342 104 36 5 chr2 145112262 145112483 -105575371 + AluY SINE Alu 83 310 -1 2162 102 0 35 chr2 145113023 145113336 -105574518 - AluSx SINE Alu -10 302 1 343 328 174 44 chr2 145113611 145113904 -105573950 - L2 LINE L2 0 3272 2942 331 194 15 0 chr2 145114310 145114377 -105573477 - HsTC2 DNA Tc2 -1830 68 1 269 221 19 52 chr2 145114427 145114581 -105573273 + (TA)n Simple_repeat Simple_repeat 1 149 0 294 256 13 0 chr2 145114651 145114729 -105573125 - HsTC2 DNA Tc2 -1819 79 1 1294 201 0 4 chr2 145114858 145115092 -105572762 - AluJo SINE Alu -17 295 63 1804 149 14 3 chr2 145115161 145115450 -105572404 - AluSx SINE Alu -19 293 2 227 365 160 31 chr2 145115615 145116204 -105571650 + L2 LINE L2 2075 2739 -575 566 259 49 5 chr2 145118161 145118346 -105569508 - MIR SINE MIR 0 262 70 4694 214 47 21 chr2 145118491 145119255 -105568599 + L1MB8 LINE L1 3960 4703 -1475 1478 173 11 46 chr2 145119255 145119538 -105568316 + AluJb SINE Alu 23 295 -17 4694 214 47 21 chr2 145119538 145120828 -105567026 + L1MB8 LINE L1 4703 6066 -112 1196 221 15 11 chr2 145120857 145121119 -105566735 - AluJo SINE Alu -49 263 1 226 308 15 0 chr2 145121300 145121365 -105566489 - L2 LINE L2 -16 3256 3191 633 240 29 23 chr2 145121561 145121736 -105566118 + MIR SINE MIR 73 248 -14 514 270 38 66 chr2 145123052 145123263 -105564591 - MER20B DNA MER1_type -572 211 7 1902 151 7 3 chr2 145123303 145123587 -105564267 + AluJb SINE Alu 1 285 -27 317 302 113 59 chr2 145123909 145124131 -105563723 - MIR SINE MIR 0 262 29 301 325 67 40 chr2 145124149 145124478 -105563376 + L1ME4a LINE L1 5625 5962 -159 270 266 111 73 chr2 145124917 145124968 -105562886 + L1ME4a LINE L1 5568 5616 -505 2125 110 0 7 chr2 145124968 145125259 -105562595 - AluSg SINE Alu -21 289 1 270 266 111 73 chr2 145125259 145125523 -105562331 + L1ME4a LINE L1 5616 5895 -226 216 67 0 0 chr2 145126423 145126453 -105561401 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 606 178 0 93 chr2 145126453 145126582 -105561272 - FLAM_C SINE Alu -26 117 1 1827 140 33 0 chr2 145127399 145127699 -105560155 + MER44D DNA MER2_type 30 609 0 1147 307 61 16 chr2 145127701 145128311 -105559543 - L1MC4 LINE L1 -124 7918 7282 387 176 14 14 chr2 145128302 145128376 -105559478 - L1MC4 LINE L1 -1069 6973 6900 * 640 254 92 62 chr2 145128440 145129016 -105558838 + HAL1 LINE L1 945 1537 -970 393 341 89 0 chr2 145129170 145129349 -105558505 + MIR SINE MIR 47 241 -21 471 120 0 0 chr2 145129737 145129812 -105558042 - L1MA10 LINE L1 -9 6325 6251 414 302 98 26 chr2 145129833 145130138 -105557716 - L1ME4a LINE L1 -176 5945 5619 900 209 0 0 chr2 145130147 145130310 -105557544 - AluJb SINE Alu -16 296 134 183 80 0 0 chr2 145130890 145130915 -105556939 + (T)n Simple_repeat Simple_repeat 1 25 0 590 257 61 92 chr2 145131019 145131280 -105556574 - MIR SINE MIR 0 262 10 446 312 30 90 chr2 145131322 145131556 -105556298 + L1MEd LINE L1 403 622 -5497 562 300 102 22 chr2 145131738 145132372 -105555482 + L1MEd LINE L1 877 1959 -4170 849 258 148 60 chr2 145132859 145133928 -105553926 + L1MEd LINE L1 2094 3301 -2828 1967 165 0 0 chr2 145133928 145134231 -105553623 + AluSx SINE Alu 2 304 -8 849 258 148 60 chr2 145134231 145134467 -105553387 + L1MEd LINE L1 3301 3515 -2614 374 366 72 31 chr2 145135155 145135447 -105552407 - L2 LINE L2 -12 3260 2957 31 26 0 0 chr2 145135591 145135629 -105552225 + AT_rich Low_complexity Low_complexity 1 38 0 423 38 0 0 chr2 145136666 145136719 -105551135 + (TC)n Simple_repeat Simple_repeat 2 54 0 305 108 0 15 chr2 145136719 145136784 -105551070 + (TG)n Simple_repeat Simple_repeat 2 65 0 422 267 107 27 chr2 145136957 145137107 -105550747 + MIR SINE MIR 60 221 -41 229 226 19 0 chr2 145137526 145137579 -105550275 + (CATA)n Simple_repeat Simple_repeat 3 56 0 22 0 0 0 chr2 145137927 145137949 -105549905 + AT_rich Low_complexity Low_complexity 1 22 0 1588 164 0 39 chr2 145137971 145138251 -105549603 - AluJo SINE Alu -15 297 29 1049 251 149 52 chr2 145138487 145138511 -105549343 + MLT1G1 LTR MaLR 5 25 -570 225 0 0 0 chr2 145138511 145138536 -105549318 + (CAAT)n Simple_repeat Simple_repeat 1 25 0 1049 251 149 52 chr2 145138536 145139048 -105548806 + MLT1G1 LTR MaLR 25 593 -2 502 296 133 56 chr2 145139286 145139556 -105548298 + L2 LINE L2 2978 3268 -4 24 0 0 0 chr2 145140059 145140083 -105547771 + AT_rich Low_complexity Low_complexity 1 24 0 491 272 212 78 chr2 145140242 145140381 -105547473 + L2 LINE L2 1954 2073 -1241 1655 174 3 17 chr2 145140381 145140679 -105547175 - AluJb SINE Alu -18 294 1 491 272 212 78 chr2 145140679 145140708 -105547146 + L2 LINE L2 2073 2097 -1217 410 242 45 51 chr2 145140708 145140886 -105546968 + MER5B DNA MER1_type 1 177 -1 491 272 212 78 chr2 145140886 145141484 -105546370 + L2 LINE L2 2097 2824 -490 299 360 36 22 chr2 145141549 145141688 -105546166 + L2 LINE L2 2916 3056 -216 248 258 16 0 chr2 145142079 145142141 -105545713 + L2 LINE L2 3210 3272 0 434 277 72 0 chr2 145142271 145142437 -105545417 - L1ME4a LINE L1 -212 5909 5732 247 308 147 44 chr2 145142845 145142998 -105544856 + MIR3 SINE MIR 4 172 -76 1150 204 5 14 chr2 145142998 145143219 -105544635 - MER20 DNA MER1_type 0 219 1 247 308 147 44 chr2 145143219 145143237 -105544617 + MIR3 SINE MIR 172 187 -61 21 0 0 0 chr2 145143463 145143484 -105544370 + AT_rich Low_complexity Low_complexity 1 21 0 298 342 8 33 chr2 145144491 145144611 -105543243 + MIR SINE MIR 20 136 -126 352 329 107 7 chr2 145144932 145145072 -105542782 - L2 LINE L2 -269 3044 2891 553 317 39 0 chr2 145145363 145145543 -105542311 + MIR SINE MIR 63 249 -13 280 275 114 21 chr2 145145988 145146181 -105541673 + MARNA DNA Mariner 282 492 -94 273 297 109 0 chr2 145146096 145146234 -105541620 - MARNA DNA Mariner -398 188 36 * 1940 116 32 0 chr2 145146237 145146521 -105541333 + AluSx SINE Alu 1 293 -19 13879 191 36 5 chr2 145146628 145152223 -105535631 - L1PB1 LINE L1 0 6867 1113 1125 169 5 0 chr2 145152216 145152417 -105535437 - L1PB1 LINE L1 -6661 202 1 * 198 71 0 0 chr2 145153234 145153262 -105534592 + (CA)n Simple_repeat Simple_repeat 1 28 0 562 266 37 11 chr2 145153297 145153485 -105534369 - MER46C DNA MER2_type -66 272 80 2691 0 0 0 chr2 145153711 145154003 -105533851 - AluYa5 SINE Alu -19 292 1 2077 103 0 4 chr2 145155520 145155835 -105532019 + AluSc SINE Alu 1 314 0 419 251 45 13 chr2 145156346 145156471 -105531383 + MIR SINE MIR 1 132 -76 506 294 24 0 chr2 145156787 145156913 -105530941 + L2 LINE L2 3143 3271 -1 400 281 43 22 chr2 145158090 145158229 -105529625 - L2 LINE L2 0 3313 3172 426 20 0 0 chr2 145159537 145159588 -105528266 + (TTG)n Simple_repeat Simple_repeat 2 52 0 2095 108 0 0 chr2 145159590 145159869 -105527985 - AluSg SINE Alu -31 279 1 835 239 38 19 chr2 145162341 145162550 -105525304 - MER58C DNA MER1_type 0 215 3 478 328 8 0 chr2 145162574 145162702 -105525152 + L2 LINE L2 3144 3272 0 712 267 48 5 chr2 145162929 145163135 -105524719 + MLT1I LTR MaLR 195 409 0 180 0 0 0 chr2 145163245 145163265 -105524589 + (CAA)n Simple_repeat Simple_repeat 2 21 0 683 160 48 116 chr2 145163709 145163977 -105523877 + L1MC5 LINE L1 7497 7746 -215 223 311 88 101 chr2 145164298 145164626 -105523228 + L2 LINE L2 191 514 -2800 2269 96 0 10 chr2 145164644 145164957 -105522897 + AluSg SINE Alu 1 310 0 848 271 32 16 chr2 145165591 145165838 -105522016 + MIR SINE MIR 5 255 -7 424 227 21 2 chr2 145165847 145165956 -105521898 - L1M4 LINE L1 -299 5822 5730 559 299 36 6 chr2 145167892 145168059 -105519795 + MIR SINE MIR 59 230 -32 468 51 0 0 chr2 145168116 145168175 -105519679 + (CA)n Simple_repeat Simple_repeat 2 60 0 2233 110 3 0 chr2 145168294 145168595 -105519259 + AluSq SINE Alu 1 302 -11 218 311 14 27 chr2 145168794 145168868 -105518986 + L3 LINE CR1 433 505 -1072 2921 130 6 19 chr2 145169133 145169650 -105518204 + L1MA4A LINE L1 5794 6303 0 216 0 0 0 chr2 145169760 145169784 -105518070 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 267 408 20 7 chr2 145169801 145169953 -105517901 + L3 LINE CR1 869 1022 -555 345 257 112 10 chr2 145170003 145170209 -105517645 + L1ME4a LINE L1 5729 5955 -166 331 209 15 15 chr2 145172387 145172454 -105515400 - L2 LINE L2 -3 3269 3203 1867 150 33 3 chr2 145172668 145172968 -105514886 + AluSx SINE Alu 1 309 -3 1235 179 64 54 chr2 145173133 145173413 -105514441 - AluJb SINE Alu -29 283 1 191 167 0 21 chr2 145174620 145174668 -105513186 + GA-rich Low_complexity Low_complexity 2 48 0 2373 41 34 0 chr2 145175031 145175324 -105512530 + AluY SINE Alu 1 303 -8 801 164 190 41 chr2 145175839 145176034 -105511820 + MER58A DNA MER1_type 1 224 0 533 271 57 68 chr2 145177627 145177908 -105509946 + L1ME LINE L1 5527 5804 -317 1418 189 0 74 chr2 145179116 145179439 -105508415 - AluJb SINE Alu -10 302 4 2534 39 3 0 chr2 145179575 145179880 -105507974 - AluY SINE Alu -5 306 1 382 315 63 7 chr2 145181069 145181212 -105506642 + MIR SINE MIR 49 199 -63 768 305 65 31 chr2 145181880 145182677 -105505177 + L1ME3A LINE L1 2788 3611 -2535 737 281 128 23 chr2 145182697 145183313 -105504541 + L1ME3A LINE L1 3685 4365 -1781 317 262 194 5 chr2 145183321 145183512 -105504342 + L1ME3A LINE L1 4427 4653 -1493 609 280 149 62 chr2 145183533 145183714 -105504140 + L1ME3A LINE L1 4717 4881 -1265 2094 98 9 25 chr2 145183714 145184030 -105503824 + AluY SINE Alu 1 311 0 609 280 149 62 chr2 145184030 145184384 -105503470 + L1ME3A LINE L1 4881 5299 -847 666 258 52 52 chr2 145184397 145184684 -105503170 + L1ME3A LINE L1 5375 5661 -509 508 306 139 7 chr2 145184685 145184966 -105502888 - MER5C DNA MER1_type -6 318 1 589 223 76 16 chr2 145184974 145185158 -105502696 + MER3 DNA MER1_type 1 195 -14 1953 155 7 3 chr2 145185240 145185550 -105502304 + AluJo SINE Alu 2 312 0 810 236 41 52 chr2 145185591 145185862 -105501992 + L1ME3A LINE L1 5698 5965 -205 931 227 59 7 chr2 145186181 145186454 -105501400 + L1MB7 LINE L1 2401 2687 -3459 630 167 0 9 chr2 145186463 145186571 -105501283 - AluSg/x SINE Alu -10 299 193 3994 208 77 41 chr2 145186571 145186937 -105500917 + L1MB7 LINE L1 2675 3026 -3158 2150 123 3 0 chr2 145186937 145187239 -105500615 + AluSp SINE Alu 2 304 -9 3994 208 77 41 chr2 145187239 145187797 -105500057 + L1MB7 LINE L1 3026 3562 -2622 396 0 0 0 chr2 145187797 145187841 -105500013 + (CA)n Simple_repeat Simple_repeat 2 45 0 3994 208 77 41 chr2 145187841 145189904 -105497950 + L1MB7 LINE L1 3562 6168 -16 183 322 0 0 chr2 145189932 145189991 -105497863 + MIR SINE MIR 204 262 0 311 332 91 110 chr2 145190758 145191131 -105496723 + L2 LINE L2 2904 3269 -3 292 266 56 56 chr2 145191175 145191318 -105496536 - MIR SINE MIR -10 252 110 388 327 58 99 chr2 145191552 145191916 -105495938 + L2 LINE L2 2914 3262 -10 2404 94 0 0 chr2 145193164 145193471 -105494383 + AluSc SINE Alu 1 307 -2 419 263 145 11 chr2 145193799 145193978 -105493876 + MIR SINE MIR 49 251 -11 357 304 95 14 chr2 145194113 145194261 -105493593 + MIR SINE MIR 48 207 -55 452 265 0 116 chr2 145195862 145195958 -105491896 - MER5A DNA MER1_type 0 189 123 2016 101 11 0 chr2 145195958 145196141 -105491713 - AluY SINE Alu 0 316 127 222 62 0 0 chr2 145196141 145196173 -105491681 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2016 101 11 0 chr2 145196173 145196302 -105491552 - AluY SINE Alu -189 127 1 452 265 0 116 chr2 145196302 145196393 -105491461 - MER5A DNA MER1_type -66 123 23 845 182 55 0 chr2 145198322 145198487 -105489367 + AluJb SINE Alu 131 304 -8 335 218 300 18 chr2 145198553 145198663 -105489191 - MER5B DNA MER1_type -31 147 7 690 158 47 142 chr2 145199114 145199252 -105488602 - AluJb SINE Alu -55 257 140 1125 108 0 0 chr2 145199252 145199410 -105488444 - L1PA15 LINE L1 -8 6157 6000 690 158 47 142 chr2 145199410 145199461 -105488393 - AluJb SINE Alu -172 140 86 195 129 0 0 chr2 145200894 145200925 -105486929 + (T)n Simple_repeat Simple_repeat 1 31 0 248 302 132 9 chr2 145201325 145201431 -105486423 + MIR SINE MIR 32 150 -58 188 273 352 0 chr2 145201583 145201671 -105486183 + L2 LINE L2 3193 3311 -2 656 226 101 52 chr2 145203516 145203764 -105484090 - MIR SINE MIR -1 261 2 21 57 0 0 chr2 145204054 145204089 -105483765 + AT_rich Low_complexity Low_complexity 1 35 0 224 303 83 41 chr2 145204380 145204525 -105483329 - MIR SINE MIR -71 191 41 294 299 46 0 chr2 145204814 145204901 -105482953 + MIR SINE MIR 172 262 0 1326 158 0 0 chr2 145205239 145205448 -105482406 - AluJb SINE Alu -18 294 86 413 315 80 88 chr2 145206803 145207240 -105480614 + L2 LINE L2 2791 3222 -50 1939 137 10 20 chr2 145209156 145209456 -105478398 - AluSx SINE Alu -15 297 1 22 0 0 0 chr2 145211035 145211057 -105476797 + AT_rich Low_complexity Low_complexity 1 22 0 1349 158 13 8 chr2 145211716 145211950 -105475904 - MER46A DNA MER2_type -1 235 1 23 33 0 0 chr2 145212354 145212384 -105475470 + AT_rich Low_complexity Low_complexity 1 30 0 1178 201 42 38 chr2 145212491 145212807 -105475047 - AluJo SINE Alu 0 302 1 680 153 105 0 chr2 145212810 145212934 -105474920 - FRAM SINE Alu -17 159 23 24 53 0 0 chr2 145214060 145214098 -105473756 + AT_rich Low_complexity Low_complexity 1 38 0 312 286 0 0 chr2 145214251 145214321 -105473533 + L2 LINE L2 3195 3264 -8 193 350 88 12 chr2 145214944 145215024 -105472830 - L2 LINE L2 -32 3240 3155 331 317 120 24 chr2 145215350 145215517 -105472337 + MIR3 SINE MIR 1 183 -25 229 178 14 41 chr2 145217593 145217666 -105470188 + (CACCC)n Simple_repeat Simple_repeat 1 71 0 225 65 0 0 chr2 145217837 145217868 -105469986 + (GGA)n Simple_repeat Simple_repeat 1 31 0 573 55 0 0 chr2 145217921 145217994 -105469860 + (CAG)n Simple_repeat Simple_repeat 2 74 0 2202 92 7 7 chr2 145219832 145220138 -105467716 - AluSx SINE Alu -6 306 1 687 272 110 75 chr2 145220713 145221356 -105466498 - L1ME3A LINE L1 -215 5955 5290 714 159 0 16 chr2 145221524 145221650 -105466204 + MER3 DNA MER1_type 39 162 -47 524 166 209 164 chr2 145221653 145221774 -105466080 + MER3 DNA MER1_type 2234 2348 -276 2024 132 0 0 chr2 145221774 145222055 -105465799 - AluSx SINE Alu -30 282 2 524 166 209 164 chr2 145222055 145222306 -105465548 + MER3 DNA MER1_type 2348 2623 -1 471 289 154 47 chr2 145222320 145222606 -105465248 - L1M4c LINE L1 -4562 1822 1478 8979 94 16 19 chr2 145222606 145223832 -105464022 - HSMAR1 DNA Mariner 0 1287 63 2498 69 0 0 chr2 145223832 145224138 -105463716 + AluY SINE Alu 1 306 -5 8979 94 16 19 chr2 145224138 145224201 -105463653 - HSMAR1 DNA Mariner -1224 63 1 471 289 154 47 chr2 145224201 145224322 -105463532 - L1M4c LINE L1 -4906 1478 1371 1102 203 5 5 chr2 145224520 145224722 -105463132 + MER2 DNA MER2_type 2 203 -142 21 36 0 0 chr2 145224728 145224756 -105463098 + AT_rich Low_complexity Low_complexity 1 28 0 635 211 23 0 chr2 145225219 145225383 -105462471 - FLAM_C SINE Alu 0 167 1 29 0 0 0 chr2 145225711 145225740 -105462114 + AT_rich Low_complexity Low_complexity 1 29 0 11654 174 42 48 chr2 145225757 145228317 -105459537 - L1MA4 LINE L1 -40 7679 5092 1880 118 87 0 chr2 145228317 145228604 -105459250 + AluSx SINE Alu 1 312 0 11654 174 42 48 chr2 145228604 145230476 -105457378 - L1MA4 LINE L1 -2627 5092 3209 1677 222 137 18 chr2 145230516 145231006 -105456848 - LTR10A LTR ERV1 -61 548 1 438 195 18 44 chr2 145231007 145231120 -105456734 - LTR10A-int LTR ERV1 -2 6647 6538 7193 219 72 22 chr2 145231143 145231402 -105456452 - L1MA4 LINE L1 -4405 3160 2915 505 138 0 0 chr2 145231402 145231482 -105456372 - MADE1 DNA Mariner 0 80 1 7193 219 72 22 chr2 145231482 145233431 -105454423 - L1MA4 LINE L1 -4650 2915 134 1684 162 14 14 chr2 145233431 145233744 -105454110 - AluJb SINE Alu 0 318 6 7193 219 72 22 chr2 145233744 145233870 -105453984 - L1MA4 LINE L1 -7431 134 16 6173 63 29 1 chr2 145233900 145234703 -105453151 - L1PA7 LINE L1 -1 6153 5329 * 23365 91 6 5 chr2 145234700 145238062 -105449792 - L1PA7 LINE L1 -1021 5125 1762 642 180 123 38 chr2 145238391 145238602 -105449252 - HAL1 LINE L1 -110 2397 2169 1412 259 201 43 chr2 145238620 145239826 -105448028 - HAL1 LINE L1 -479 2028 633 685 259 112 0 chr2 145239827 145240024 -105447830 + MER20 DNA MER1_type 1 219 0 604 289 18 57 chr2 145240028 145240256 -105447598 - HAL1 LINE L1 -1872 635 417 2314 170 29 18 chr2 145240724 145241176 -105446678 - MSTB2 LTR MaLR 0 457 1 4249 151 86 27 chr2 145242072 145243104 -105444750 - L1MC2 LINE L1 -216 6128 5047 2120 113 0 3 chr2 145243117 145243423 -105444431 - AluSc SINE Alu 0 305 1 2287 94 0 16 chr2 145243425 145243555 -105444299 - AluSx SINE Alu -9 303 172 5286 61 8 158 chr2 145243555 145244526 -105443328 - LTR12 LTR ERV1 0 826 1 2287 94 0 16 chr2 145244526 145244703 -105443151 - AluSx SINE Alu -140 172 1 2438 219 54 26 chr2 145244710 145245512 -105442342 - L1MC2 LINE L1 -1109 5037 4214 2965 152 107 28 chr2 145246139 145246744 -105441110 - MER39B LTR ERV1 0 653 1 754 213 44 12 chr2 145247025 145247185 -105440669 + FRAM SINE Alu 1 165 -1 2149 104 3 7 chr2 145247601 145247899 -105439955 - AluSx SINE Alu -15 297 1 221 231 0 33 chr2 145248089 145248101 -105439753 + (TATG)n Simple_repeat Simple_repeat 1 12 -76 2308 75 3 10 chr2 145248101 145248395 -105439459 + AluSg SINE Alu 5 296 -14 221 231 0 33 chr2 145248395 145248473 -105439381 + (TATG)n Simple_repeat Simple_repeat 12 88 0 334 206 52 10 chr2 145249556 145249653 -105438201 - Charlie7 DNA MER1_type -481 2131 2031 2051 115 3 7 chr2 145249734 145250022 -105437832 - AluSx SINE Alu -25 287 1 1125 108 61 61 chr2 145250060 145250416 -105437438 + LTR23 LTR ERV1 1 437 0 563 244 156 51 chr2 145250440 145250735 -105437119 - Charlie7 DNA MER1_type -647 1965 1640 1942 103 41 17 chr2 145250793 145251083 -105436771 + AluSx SINE Alu 1 297 -15 573 275 48 35 chr2 145251117 145251346 -105436508 - Charlie7 DNA MER1_type -2282 330 99 2422 80 0 0 chr2 145251373 145251674 -105436180 - AluY SINE Alu -10 301 1 189 0 0 0 chr2 145252033 145252054 -105435800 + (TG)n Simple_repeat Simple_repeat 2 22 0 225 214 0 0 chr2 145252054 145252096 -105435758 + (TA)n Simple_repeat Simple_repeat 2 43 0 237 218 46 35 chr2 145252199 145252286 -105435568 - HAL1b LINE L1 -295 1053 966 613 183 0 0 chr2 145252304 145252408 -105435446 + FLAM_A SINE Alu 23 126 -16 461 251 212 59 chr2 145252423 145252631 -105435223 - HAL1b LINE L1 -420 928 753 324 48 0 0 chr2 145252631 145252673 -105435181 + (TG)n Simple_repeat Simple_repeat 2 43 0 461 251 212 59 chr2 145252673 145252993 -105434861 - HAL1b LINE L1 -595 753 319 227 214 143 71 chr2 145253553 145253623 -105434231 + MIR SINE MIR 31 105 -103 2553 59 0 0 chr2 145253950 145254255 -105433599 + AluY SINE Alu 1 305 -6 7405 130 47 18 chr2 145254868 145256107 -105431747 - Tigger2 DNA MER2_type 0 2718 1444 1996 200 75 8 chr2 145256113 145256644 -105431210 - L1MC/D LINE L1 -593 5766 5200 790 180 25 0 chr2 145257733 145257894 -105429960 - L1MA8 LINE L1 0 6291 6127 1456 217 0 4 chr2 145257930 145258193 -105429661 + Tigger7 DNA MER2_type 3 264 -2223 482 220 0 20 chr2 145258195 145258295 -105429559 + Tigger7 DNA MER2_type 2390 2487 0 3115 151 42 36 chr2 145258295 145258936 -105428918 - L1MA8 LINE L1 -366 5925 5281 201 39 0 0 chr2 145258936 145258962 -105428892 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 1218 169 14 0 chr2 145258976 145259183 -105428671 + MER2 DNA MER2_type 1 210 -135 24 0 0 0 chr2 145259183 145259207 -105428647 + AT_rich Low_complexity Low_complexity 1 24 0 7402 169 55 4 chr2 145259275 145260772 -105427082 - L1MA8 LINE L1 -874 5272 3699 312 362 9 0 chr2 145260764 145260869 -105426985 + L1M3a LINE L1 277 382 -5573 * 273 328 64 35 chr2 145260904 145261188 -105426666 + L1M3a LINE L1 301 772 -5183 322 285 39 31 chr2 145261199 145261329 -105426525 + L1M3a LINE L1 316 446 -5509 582 300 28 22 chr2 145261496 145261676 -105426178 + L1M3a LINE L1 347 527 -5428 771 318 16 4 chr2 145261790 145262035 -105425819 - L1M3a LINE L1 -5706 249 2 420 228 22 22 chr2 145262099 145262191 -105425663 - MLT1D LTR MaLR -78 427 336 694 286 42 0 chr2 145262224 145262416 -105425438 + MIR SINE MIR 45 244 -18 26 50 0 0 chr2 145262533 145262573 -105425281 + AT_rich Low_complexity Low_complexity 1 40 0 1140 151 48 15 chr2 145262938 145263144 -105424710 - Tigger1 DNA MER2_type -4 2414 2202 602 215 25 57 chr2 145263133 145263291 -105424563 - Tigger1 DNA MER2_type -2261 157 5 * 1079 178 4 48 chr2 145263896 145264165 -105423689 - L1M4 LINE L1 -1949 4197 3941 282 270 0 70 chr2 145264402 145264517 -105423337 - L1ME3 LINE L1 -1 6161 6055 21 0 0 0 chr2 145264619 145264640 -105423214 + AT_rich Low_complexity Low_complexity 1 21 0 2105 128 0 3 chr2 145264798 145265094 -105422760 - AluSx SINE Alu -17 295 1 25 65 0 0 chr2 145265858 145265904 -105421950 + AT_rich Low_complexity Low_complexity 1 46 0 26 64 0 0 chr2 145266751 145266798 -105421056 + AT_rich Low_complexity Low_complexity 1 47 0 218 259 214 9 chr2 145267024 145267136 -105420718 - MIR SINE MIR -6 256 122 29 28 0 0 chr2 145267812 145267848 -105420006 + AT_rich Low_complexity Low_complexity 1 36 0 912 161 102 4 chr2 145267858 145268125 -105419729 - L1MC/D LINE L1 -743 5403 5178 186 43 0 0 chr2 145268195 145268218 -105419636 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1605 174 14 21 chr2 145268312 145268593 -105419261 - AluJo SINE Alu -33 279 1 2716 242 62 25 chr2 145268593 145269590 -105418264 - L1MC/D LINE L1 -980 5166 4133 12415 200 70 37 chr2 145270011 145273404 -105414450 - L1MA5A LINE L1 0 6939 3444 750 161 0 0 chr2 145273404 145273522 -105414332 - FLAM_C SINE Alu -15 118 1 12415 200 70 37 chr2 145273522 145274585 -105413269 - L1MA5A LINE L1 -3495 3444 2418 32 57 0 0 chr2 145274633 145274686 -105413168 + AT_rich Low_complexity Low_complexity 1 53 0 8954 153 19 188 chr2 145274716 145277508 -105410346 - L1MA5A LINE L1 -4456 2333 14 1938 151 16 0 chr2 145277983 145278288 -105409566 - AluSx SINE Alu -2 310 1 21 36 0 0 chr2 145278295 145278323 -105409531 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 145278486 145278507 -105409347 + AT_rich Low_complexity Low_complexity 1 21 0 615 212 27 14 chr2 145278547 145278693 -105409161 - FRAM SINE Alu -18 158 11 27 0 0 0 chr2 145279433 145279460 -105408394 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr2 145280792 145280820 -105407034 + AT_rich Low_complexity Low_complexity 1 28 0 254 386 32 32 chr2 145281525 145281776 -105406078 + MIR SINE MIR 9 259 -3 331 209 11 51 chr2 145282166 145282343 -105405511 + (TTATA)n Simple_repeat Simple_repeat 3 172 0 22 0 0 0 chr2 145282346 145282368 -105405486 + AT_rich Low_complexity Low_complexity 1 22 0 297 317 99 35 chr2 145282807 145282949 -105404905 - MIR3 SINE MIR -40 168 18 215 212 0 45 chr2 145282954 145283020 -105404834 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 244 221 98 68 chr2 145284147 145284310 -105403544 - L1ME4a LINE L1 0 6121 5954 256 261 254 0 chr2 145284518 145284683 -105403171 - L1ME4a LINE L1 -460 5661 5455 2045 151 32 3 chr2 145284826 145285164 -105402690 + MER7A DNA MER2_type 1 346 0 33 25 0 0 chr2 145285366 145285406 -105402448 + AT_rich Low_complexity Low_complexity 1 40 0 24 77 0 0 chr2 145286001 145286053 -105401801 + AT_rich Low_complexity Low_complexity 1 52 0 1663 118 118 26 chr2 145286127 145286398 -105401456 - AluSq SINE Alu -17 296 1 2355 82 3 0 chr2 145286408 145286701 -105401153 - AluSp SINE Alu -19 294 1 25 31 0 0 chr2 145287089 145287121 -105400733 + AT_rich Low_complexity Low_complexity 1 32 0 1513 173 180 20 chr2 145287724 145288118 -105399736 - MSTB2 LTR MaLR 0 457 1 2341 100 0 0 chr2 145288651 145288961 -105398893 - AluSg SINE Alu 0 310 1 565 219 95 57 chr2 145289577 145289860 -105397994 - L1MC5 LINE L1 -50 7911 7618 * 1976 195 112 16 chr2 145289858 145290360 -105397494 - L1MB8 LINE L1 -1 6177 5628 291 76 51 25 chr2 145290366 145290445 -105397409 + (TA)n Simple_repeat Simple_repeat 1 81 0 37 76 0 0 chr2 145291678 145291757 -105396097 + AT_rich Low_complexity Low_complexity 1 79 0 199 346 116 16 chr2 145294872 145295190 -105392664 + L2 LINE L2 1812 2161 -1153 686 183 15 0 chr2 145296046 145296177 -105391677 - FLAM_C SINE Alu -10 133 1 2133 234 40 52 chr2 145296215 145297043 -105390811 - L1MB8 LINE L1 -1543 4603 3786 499 303 128 23 chr2 145297245 145297463 -105390391 - MIR SINE MIR -1 261 21 192 152 0 0 chr2 145297639 145297672 -105390182 + (TATG)n Simple_repeat Simple_repeat 2 34 0 314 243 87 60 chr2 145298124 145298309 -105389545 + L1ME3 LINE L1 5674 5863 -299 402 88 176 0 chr2 145298394 145298462 -105389392 + MADE1 DNA Mariner 1 80 0 1464 116 1 116 chr2 145298613 145299111 -105388743 - L1PB1 LINE L1 -191 5960 5570 784 170 0 0 chr2 145299111 145299252 -105388602 + L1PB1 LINE L1 6003 6143 -8 29 0 0 0 chr2 145299259 145299288 -105388566 + AT_rich Low_complexity Low_complexity 1 29 0 530 176 56 24 chr2 145299424 145299549 -105388305 - MER53 DNA DNA -60 129 1 261 319 139 18 chr2 145300742 145300908 -105386946 - MIR SINE MIR -1 261 76 1109 191 123 9 chr2 145301754 145302094 -105385760 - Charlie5 DNA MER1_type 0 2621 2243 2249 86 13 13 chr2 145302405 145302707 -105385147 - AluSg SINE Alu -8 302 1 286 314 12 12 chr2 145304490 145304576 -105383278 + MER5A DNA MER1_type 8 93 -96 1549 162 72 36 chr2 145304609 145304943 -105382911 + MER7A DNA MER2_type 2 345 -1 8005 26 4 0 chr2 145306935 145307889 -105379965 - L1P LINE L1 -1449 4697 3740 6089 17 0 0 chr2 145307889 145308589 -105379265 + L1PA2 LINE L1 5455 6154 -1 192 40 0 0 chr2 145309073 145309098 -105378756 + (A)n Simple_repeat Simple_repeat 1 25 0 429 271 214 24 chr2 145314094 145314304 -105373550 - MIR SINE MIR 0 262 13 307 310 168 0 chr2 145314443 145314556 -105373298 - L3 LINE CR1 -37 1540 1409 477 237 160 51 chr2 145314564 145314720 -105373134 + MER5A DNA MER1_type 16 188 -1 211 282 198 57 chr2 145315173 145315506 -105372348 - L3 LINE CR1 -172 1405 1026 449 279 132 25 chr2 145315957 145316154 -105371700 + MIR SINE MIR 32 249 -13 22 35 0 0 chr2 145316298 145316327 -105371527 + AT_rich Low_complexity Low_complexity 1 29 0 2137 129 0 3 chr2 145318111 145318422 -105369432 + AluSx SINE Alu 1 310 -2 237 297 237 20 chr2 145318602 145318851 -105369003 + L3b LINE CR1 1115 1417 -166 185 300 60 0 chr2 145321588 145321638 -105366216 - MIR SINE MIR -119 89 37 183 80 0 0 chr2 145322246 145322271 -105365583 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 435 254 160 41 chr2 145322790 145322959 -105364895 + MIR SINE MIR 2 190 -72 261 0 0 0 chr2 145325594 145325623 -105362231 + (T)n Simple_repeat Simple_repeat 1 29 0 26 64 0 0 chr2 145326304 145326351 -105361503 + AT_rich Low_complexity Low_complexity 1 47 0 1674 196 3 13 chr2 145329505 145329817 -105358037 + AluJb SINE Alu 1 309 -3 231 36 0 0 chr2 145330039 145330067 -105357787 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 219 188 38 88 chr2 145330067 145330147 -105357707 - L2 LINE L2 -13 3300 3225 257 325 250 0 chr2 145330304 145330504 -105357350 - L2 LINE L2 -829 2485 2236 2249 105 0 40 chr2 145331377 145331702 -105356152 - AluSx SINE Alu 0 312 1 499 237 66 79 chr2 145331764 145331875 -105355979 + MIR SINE MIR 36 147 -115 5510 79 1 3 chr2 145331875 145332623 -105355231 + L1PA8 LINE L1 5426 6172 0 499 237 66 79 chr2 145332623 145332739 -105355115 + MIR SINE MIR 147 260 -2 222 91 0 0 chr2 145333856 145333889 -105353965 + (CA)n Simple_repeat Simple_repeat 2 34 0 202 321 202 0 chr2 145335542 145335651 -105352203 - L2 LINE L2 -8 3305 3175 452 252 32 0 chr2 145335661 145335784 -105352070 - MER105 DNA DNA -2 202 76 242 363 178 14 chr2 145335785 145336066 -105351788 - L2 LINE L2 -437 2877 2551 308 306 112 22 chr2 145337192 145337326 -105350528 - MER5A DNA MER1_type -1 188 43 290 309 137 29 chr2 145337215 145337354 -105350500 + MER5A DNA MER1_type 36 189 0 * 189 135 0 96 chr2 145337420 145337472 -105350382 + MIR SINE MIR 215 261 -1 22 35 0 0 chr2 145340004 145340033 -105347821 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 145340269 145340292 -105347562 + AT_rich Low_complexity Low_complexity 1 23 0 203 291 0 0 chr2 145340398 145340453 -105347401 + (TA)n Simple_repeat Simple_repeat 2 56 0 27 73 0 0 chr2 145340992 145341047 -105346807 + AT_rich Low_complexity Low_complexity 1 55 0 2177 103 7 0 chr2 145342140 145342430 -105345424 + AluSp SINE Alu 3 294 -19 573 191 46 15 chr2 145343378 145343509 -105344345 + Charlie1 DNA MER1_type 1570 1704 -1057 1311 169 36 0 chr2 145343512 145343761 -105344093 - Tigger2 DNA MER2_type 0 2718 2461 4889 129 11 0 chr2 145343826 145344552 -105343302 - Tigger2 DNA MER2_type -1984 734 1 2112 191 29 44 chr2 145344602 145345126 -105342728 + Charlie1 DNA MER1_type 1815 2330 -431 2987 226 55 33 chr2 145345126 145346560 -105341294 + L1ME1 LINE L1 4699 6166 0 1580 189 119 11 chr2 145346565 145347010 -105340844 + Charlie1 DNA MER1_type 2264 2756 -5 2159 102 0 0 chr2 145347176 145347491 -105340363 + AluSg SINE Alu 1 315 0 1291 167 30 4 chr2 145347642 145347875 -105339979 - MER58B DNA MER1_type 0 341 103 413 183 176 61 chr2 145347877 145348008 -105339846 - MER58B DNA MER1_type -194 147 2 332 291 0 23 chr2 145348227 145348313 -105339541 + MER117 DNA MER1_type 7 90 -107 23 54 0 0 chr2 145348629 145348666 -105339188 + AT_rich Low_complexity Low_complexity 1 37 0 212 122 24 0 chr2 145349000 145349041 -105338813 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 252 0 0 0 chr2 145349076 145349104 -105338750 + (CA)n Simple_repeat Simple_repeat 2 29 0 303 269 54 0 chr2 145349350 145349472 -105338382 + MIR SINE MIR 51 181 -27 2288 78 0 10 chr2 145349687 145349983 -105337871 - AluY SINE Alu -18 293 1 3979 234 61 40 chr2 145350072 145351409 -105336445 + L1M4 LINE L1 3570 4933 -1213 741 93 87 47 chr2 145351693 145351843 -105336011 + L1MA8 LINE L1 6132 6287 -4 379 357 32 0 chr2 145351969 145352095 -105335759 + L2 LINE L2 3143 3272 0 1881 159 3 3 chr2 145352220 145352516 -105335338 - AluJo SINE Alu -16 296 1 2279 119 0 0 chr2 145355956 145356268 -105331586 + AluSp SINE Alu 2 313 0 2070 130 0 10 chr2 145356868 145357176 -105330678 - AluSx SINE Alu -6 306 2 510 17 0 0 chr2 145357784 145357843 -105330011 + (CA)n Simple_repeat Simple_repeat 1 59 0 21 57 0 0 chr2 145359034 145359069 -105328785 + AT_rich Low_complexity Low_complexity 1 35 0 631 193 59 0 chr2 145359109 145359228 -105328626 + FLAM_C SINE Alu 1 126 -17 547 314 33 16 chr2 145359572 145359814 -105328040 + L2 LINE L2 2586 2831 -483 824 179 241 52 chr2 145359966 145360273 -105327581 + MLT1A1 LTR MaLR 1 365 0 1727 174 7 3 chr2 145360526 145360819 -105327035 - AluJb SINE Alu -18 294 1 588 161 0 0 chr2 145361931 145362024 -105325830 - U6 snRNA snRNA -14 93 1 183 233 81 105 chr2 145363856 145363942 -105323912 + MER5A DNA MER1_type 63 146 -43 428 285 62 45 chr2 145364756 145364935 -105322919 - MER5A DNA MER1_type -1 188 7 440 234 193 20 chr2 145365087 145365284 -105322570 - MIR SINE MIR -31 231 1 1115 203 91 4 chr2 145365908 145366198 -105321656 + MER33 DNA MER1_type 1 302 -22 252 295 32 42 chr2 145366600 145366695 -105321159 + L3 LINE CR1 147 240 -1337 1597 173 7 11 chr2 145370513 145370824 -105317030 + AluJb SINE Alu 1 310 0 209 404 43 29 chr2 145371008 145371267 -105316587 + L2 LINE L2 2778 3037 -235 665 322 160 21 chr2 145372139 145372707 -105315147 + L2 LINE L2 1733 2379 -935 552 250 173 0 chr2 145372979 145373135 -105314719 + MER5A DNA MER1_type 7 189 0 371 311 93 50 chr2 145373473 145373753 -105314101 + L2 LINE L2 2967 3258 -14 202 375 60 25 chr2 145373740 145373940 -105313914 - L2 LINE L2 -1028 2286 2080 * 268 266 242 32 chr2 145374214 145374338 -105313516 - L2 LINE L2 0 3313 3164 1962 118 3 10 chr2 145374916 145375212 -105312642 + AluSg SINE Alu 1 294 -16 1743 131 153 87 chr2 145375671 145376075 -105311779 + Tigger2a DNA MER2_type 1 431 -3 407 221 178 49 chr2 145376349 145376512 -105311342 + MIR SINE MIR 64 247 -15 2254 95 0 3 chr2 145376689 145376985 -105310869 - AluSx SINE Alu -17 295 1 236 297 135 0 chr2 145377385 145377459 -105310395 + MIR SINE MIR 43 126 -82 1321 139 4 68 chr2 145377695 145377947 -105309907 - MER46A DNA MER2_type 0 236 1 485 261 0 51 chr2 145378294 145378432 -105309422 - MIR SINE MIR -6 256 126 201 228 193 0 chr2 145379609 145379666 -105308188 + MIR SINE MIR 110 177 -85 681 212 138 14 chr2 145379804 145380021 -105307833 + MER112 DNA MER1_type 5 248 -12 1385 164 137 7 chr2 145380458 145380757 -105307097 + MER58B DNA MER1_type 2 339 -2 263 178 22 0 chr2 145380783 145380828 -105307026 - L2 LINE L2 -3 3310 3265 196 295 116 18 chr2 145380907 145381019 -105306835 - L2 LINE L2 -410 2904 2782 2098 76 73 3 chr2 145381290 145381607 -105306247 + L1PA13 LINE L1 5809 6147 -16 210 37 0 0 chr2 145381886 145381913 -105305941 + (T)n Simple_repeat Simple_repeat 1 27 0 200 143 0 24 chr2 145383836 145383878 -105303976 - MIR3 SINE MIR -5 203 163 379 308 88 9 chr2 145383881 145384108 -105303746 + L2 LINE L2 2599 2843 -471 346 273 55 55 chr2 145384137 145384266 -105303588 - L2 LINE L2 -15 3298 3167 2126 112 7 0 chr2 145384266 145384560 -105303294 + AluSx SINE Alu 1 296 -16 346 273 55 55 chr2 145384560 145384613 -105303241 - L2 LINE L2 -145 3168 3116 424 283 134 21 chr2 145384622 145384809 -105303045 + L2 LINE L2 3106 3313 0 195 350 106 8 chr2 145384805 145384928 -105302926 - MIR3 SINE MIR -44 164 30 * 22 35 0 0 chr2 145385647 145385676 -105302178 + AT_rich Low_complexity Low_complexity 1 29 0 458 243 84 107 chr2 145387026 145387289 -105300565 - MER112 DNA MER1_type 0 260 4 33 43 0 0 chr2 145387324 145387371 -105300483 + AT_rich Low_complexity Low_complexity 1 47 0 363 259 0 52 chr2 145387451 145387567 -105300287 - MIR3 SINE MIR -1 207 98 395 336 95 76 chr2 145387570 145387993 -105299861 - L2 LINE L2 -1 3271 2841 742 210 68 23 chr2 145387994 145388170 -105299684 - MIR SINE MIR -67 195 12 533 348 22 26 chr2 145388174 145388447 -105299407 - L2 LINE L2 -474 2840 2569 205 231 0 64 chr2 145389241 145389319 -105298535 + GA-rich Low_complexity Low_complexity 3 75 0 22 35 0 0 chr2 145390334 145390363 -105297491 + AT_rich Low_complexity Low_complexity 1 29 0 1624 122 19 0 chr2 145390620 145390883 -105296971 - L1PA14 LINE L1 0 6161 5894 1007 152 54 16 chr2 145390888 145391072 -105296782 - MER20 DNA MER1_type 0 219 29 204 67 0 0 chr2 145393032 145393062 -105294792 + (CA)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr2 145394079 145394100 -105293754 + GC_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr2 145394418 145394444 -105293410 + (A)n Simple_repeat Simple_repeat 1 26 0 234 0 0 0 chr2 145395762 145395788 -105292066 + (A)n Simple_repeat Simple_repeat 1 26 0 207 204 0 0 chr2 145395801 145395845 -105292009 + A-rich Low_complexity Low_complexity 1 44 0 263 128 39 13 chr2 145396129 145396207 -105291647 + (CGG)n Simple_repeat Simple_repeat 3 82 0 318 50 0 0 chr2 145396348 145396388 -105291466 + (CGG)n Simple_repeat Simple_repeat 1 40 0 242 263 17 34 chr2 145396398 145396516 -105291338 + G-rich Low_complexity Low_complexity 6 121 0 321 287 74 19 chr2 145397426 145397534 -105290320 + L2 LINE L2 3198 3311 -2 245 364 130 20 chr2 145397534 145397787 -105290067 - L3 LINE CR1 -541 1036 756 631 246 125 28 chr2 145400040 145400222 -105287632 + MER5C DNA MER1_type 3 217 -107 1758 170 3 26 chr2 145400222 145400534 -105287320 - AluJb SINE Alu -7 305 1 631 246 125 28 chr2 145400534 145400599 -105287255 + MER5C DNA MER1_type 217 274 -50 2539 315 129 54 chr2 145400800 145402153 -105285701 - L2 LINE L2 0 3313 2063 2146 131 0 0 chr2 145402153 145402459 -105285395 + AluSx SINE Alu 1 306 -6 2539 315 129 54 chr2 145402459 145403286 -105284568 - L2 LINE L2 -1250 2063 923 1826 171 50 0 chr2 145403286 145403607 -105284247 + MER1B DNA MER1_type 1 337 0 2539 315 129 54 chr2 145403607 145403871 -105283983 - L2 LINE L2 -2390 923 680 216 143 0 0 chr2 145404061 145404103 -105283751 + (T)n Simple_repeat Simple_repeat 1 42 0 297 303 90 16 chr2 145404333 145404455 -105283399 - MIR SINE MIR -95 113 36 206 19 58 77 chr2 145404603 145404655 -105283199 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 325 348 45 40 chr2 145405150 145405570 -105282284 + L1ME3 LINE L1 350 771 -5645 1262 276 106 44 chr2 145405973 145406869 -105280985 + L1ME3 LINE L1 1027 1866 -4560 1074 191 108 102 chr2 145406869 145407241 -105280613 - MLT1A2 LTR MaLR 0 374 1 1262 276 106 44 chr2 145407241 145407910 -105279944 + L1ME3 LINE L1 1866 2853 -3573 3821 261 77 62 chr2 145407913 145408731 -105279123 + L1ME3 LINE L1 2933 3738 -2688 258 32 0 0 chr2 145408731 145408762 -105279092 + (CA)n Simple_repeat Simple_repeat 1 31 0 3821 261 77 62 chr2 145408762 145410439 -105277415 + L1ME3 LINE L1 3738 5464 -962 1126 271 64 30 chr2 145410481 145410921 -105276933 + L1ME3 LINE L1 5599 6053 -389 4628 187 55 12 chr2 145410961 145411857 -105275997 - L1MB7 LINE L1 -10 6672 5816 2338 63 21 0 chr2 145411857 145412143 -105275711 + AluY SINE Alu 1 292 -19 4628 187 55 12 chr2 145412143 145412250 -105275604 - L1MB7 LINE L1 -866 5816 5715 1823 125 27 27 chr2 145412250 145412546 -105275308 - AluSx SINE Alu -16 296 1 4628 187 55 12 chr2 145412546 145412678 -105275176 - L1MB7 LINE L1 -967 5715 5467 5392 105 19 72 chr2 145412690 145414113 -105273741 - pTR5 LTR ERV1 -143 2295 781 6770 234 106 36 chr2 145414132 145414414 -105273440 - L1MB7 LINE L1 -1177 5467 5206 189 74 0 0 chr2 145414414 145414441 -105273413 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1894 130 19 0 chr2 145414445 145414715 -105273139 - AluSx SINE Alu -37 275 1 6770 234 106 36 chr2 145414715 145414826 -105273028 - L1MB7 LINE L1 -1440 5204 5102 2337 95 0 0 chr2 145414826 145415121 -105272733 - AluSx SINE Alu -17 295 1 6770 234 106 36 chr2 145415121 145417765 -105270089 - L1MB7 LINE L1 -1542 5102 2201 5923 219 52 36 chr2 145417778 145419448 -105268406 - L1MB7 LINE L1 -4831 1711 16 1126 242 103 3 chr2 145419462 145419813 -105268041 + L1ME3 LINE L1 6055 6442 -8 1518 185 10 36 chr2 145420417 145420719 -105267135 - AluJo SINE Alu -14 298 5 226 333 36 67 chr2 145421179 145421374 -105266480 - L3 LINE CR1 -756 821 633 2393 59 0 3 chr2 145422638 145422924 -105264930 - AluY SINE Alu -3 308 24 2043 120 41 0 chr2 145423000 145423291 -105264563 - AluSg SINE Alu -7 303 1 2215 99 0 0 chr2 145424301 145424619 -105263235 + AluSx SINE Alu 1 318 0 577 101 0 0 chr2 145424677 145424756 -105263098 + AluSc SINE Alu 3 81 -228 375 58 420 0 chr2 145424756 145424825 -105263029 + AluSc SINE Alu 200 297 -2 1214 268 85 69 chr2 145425231 145425986 -105261868 - L1MC4a LINE L1 -1788 6300 5534 369 318 70 39 chr2 145426427 145426867 -105260987 - L1MC4a LINE L1 -1218 5208 4755 344 267 249 6 chr2 145426887 145427052 -105260802 - L1MC4a LINE L1 -1733 4693 4489 335 263 22 11 chr2 145427296 145427463 -105260391 - L1MC4a LINE L1 -1339 6983 2007 369 278 0 0 chr2 145427329 145427419 -105260435 + L1MC4 LINE L1 6614 6703 -1339 995 101 0 14 chr2 145427614 145427753 -105260101 + AluSq/x SINE Alu 1 137 -175 2392 75 0 31 chr2 145427754 145428072 -105259782 + AluY SINE Alu 1 308 -3 23 0 0 0 chr2 145428975 145428998 -105258856 + AT_rich Low_complexity Low_complexity 1 23 0 728 99 9 0 chr2 145429784 145429895 -105257959 + (TCCC)n Simple_repeat Simple_repeat 4 115 0 2153 127 3 0 chr2 145430483 145430791 -105257063 - AluSx SINE Alu -3 309 1 253 299 171 33 chr2 145430852 145431063 -105256791 + MIR SINE MIR 17 256 -6 22 0 0 0 chr2 145431121 145431143 -105256711 + AT_rich Low_complexity Low_complexity 1 22 0 1393 244 143 88 chr2 145431145 145431235 -105256619 - L2 LINE L2 -1 3312 3228 1753 162 10 32 chr2 145431235 145431563 -105256291 + AluJb SINE Alu 1 312 0 1393 244 143 88 chr2 145431563 145432488 -105255366 - L2 LINE L2 -85 3228 2087 738 100 0 0 chr2 145432888 145432988 -105254866 - AluS SINE Alu -212 100 1 1376 216 98 23 chr2 145433596 145434026 -105253828 + MLT1C LTR MaLR 6 467 0 382 248 9 9 chr2 145434649 145434754 -105253100 + MLT1K LTR MaLR 484 588 0 252 0 0 0 chr2 145434973 145435001 -105252853 + (CA)n Simple_repeat Simple_repeat 2 29 0 183 407 21 14 chr2 145437238 145437383 -105250471 + L2 LINE L2 2360 2505 -809 338 346 111 42 chr2 145437685 145437974 -105249880 + L2 LINE L2 2942 3250 -22 504 271 18 84 chr2 145438947 145439231 -105248623 + MLT1K LTR MaLR 311 575 -13 2415 89 0 19 chr2 145439285 145439600 -105248254 + AluSg SINE Alu 1 309 -1 813 292 169 33 chr2 145439878 145440422 -105247432 + MLT2F LTR ERVL 45 662 -1 377 295 29 9 chr2 145440526 145440631 -105247223 + MIR SINE MIR 40 146 -116 542 240 110 0 chr2 145441623 145441777 -105246077 + MIR SINE MIR 84 254 -8 512 326 80 21 chr2 145442365 145442739 -105245115 + MLT1K LTR MaLR 180 575 -13 183 42 0 0 chr2 145445065 145445089 -105242765 + (TTTTTA)n Simple_repeat Simple_repeat 4 27 0 1229 171 25 42 chr2 145445089 145445328 -105242526 - AluJo SINE Alu -49 263 29 23 33 0 0 chr2 145445345 145445375 -105242479 + AT_rich Low_complexity Low_complexity 1 30 0 555 258 60 0 chr2 145445401 145445568 -105242286 + MIR SINE MIR 86 262 0 2308 97 0 0 chr2 145446130 145446428 -105241426 - AluSx SINE Alu -14 298 1 234 231 31 0 chr2 145446903 145446968 -105240886 + L1MB8 LINE L1 6112 6178 0 327 49 0 0 chr2 145446982 145447023 -105240831 + (TG)n Simple_repeat Simple_repeat 2 42 0 356 249 102 100 chr2 145447722 145448232 -105239622 + MLT1J LTR MaLR 1 511 0 1783 141 76 25 chr2 145448737 145449091 -105238763 - THE1C LTR MaLR -3 372 1 750 246 16 62 chr2 145449239 145449268 -105238586 + MIR SINE MIR 9 38 -224 2276 114 0 0 chr2 145449268 145449566 -105238288 + AluSx SINE Alu 5 302 -10 750 246 16 62 chr2 145449566 145449792 -105238062 + MIR SINE MIR 38 252 -10 22 56 0 0 chr2 145451777 145451813 -105236041 + AT_rich Low_complexity Low_complexity 1 36 0 315 0 0 0 chr2 145451835 145451870 -105235984 + (CA)n Simple_repeat Simple_repeat 2 36 0 23 68 0 0 chr2 145451915 145451959 -105235895 + AT_rich Low_complexity Low_complexity 1 44 0 835 190 58 39 chr2 145451960 145452165 -105235689 - MER2 DNA MER2_type -136 209 1 837 264 58 74 chr2 145455413 145455845 -105232009 + MLT1J1 LTR MaLR 4 428 -18 2430 73 0 7 chr2 145456509 145456811 -105231043 - AluSq SINE Alu -13 300 1 235 318 30 0 chr2 145459373 145459439 -105228415 + MIR SINE MIR 1 68 -194 325 234 22 46 chr2 145459689 145459800 -105228054 + MLT1J2 LTR MaLR 294 448 -2 183 289 82 72 chr2 145459939 145460036 -105227818 - L2 LINE L2 -20 3252 3155 274 304 11 11 chr2 145460113 145460205 -105227649 - MIR SINE MIR -75 187 96 391 242 23 144 chr2 145460279 145460327 -105227527 - MIR SINE MIR -17 245 193 249 108 0 0 chr2 145460327 145460364 -105227490 + (CA)n Simple_repeat Simple_repeat 1 37 0 391 242 23 144 chr2 145460364 145460579 -105227275 - MIR SINE MIR -69 193 14 193 310 99 0 chr2 145460657 145460728 -105227126 - L2 LINE L2 -555 2759 2682 302 232 24 12 chr2 145461153 145461235 -105226619 + MIR SINE MIR 2 84 -178 369 193 125 0 chr2 145461508 145461596 -105226258 + MIR SINE MIR 160 258 -4 186 118 0 0 chr2 145462948 145462982 -105224872 + (TG)n Simple_repeat Simple_repeat 1 34 0 1866 114 53 0 chr2 145463119 145463383 -105224471 - AluSg SINE Alu -6 304 27 723 280 60 32 chr2 145463931 145464213 -105223641 + L2 LINE L2 3021 3310 -3 192 333 43 77 chr2 145465824 145465941 -105221913 - L2 LINE L2 -16 3297 3185 41668 41 5 0 chr2 145467930 145474041 -105213813 - L1PA4 LINE L1 -11 6144 1 27 0 0 0 chr2 145474763 145474790 -105213064 + AT_rich Low_complexity Low_complexity 1 27 0 281 274 0 0 chr2 145475157 145475219 -105212635 - L2 LINE L2 -6 3307 3246 22 0 0 0 chr2 145475221 145475243 -105212611 + AT_rich Low_complexity Low_complexity 1 22 0 339 264 57 0 chr2 145476200 145476306 -105211548 - LTR67 LTR ERVL 0 557 446 237 275 24 121 chr2 145476541 145476748 -105211106 - LTR67 LTR ERVL -368 189 3 328 299 80 72 chr2 145476915 145476988 -105210866 + L1M4 LINE L1 4407 4478 -1668 2443 117 11 3 chr2 145476988 145477347 -105210507 + THE1B LTR MaLR 1 362 -2 328 299 80 72 chr2 145477347 145477543 -105210311 + L1M4 LINE L1 4478 4671 -1475 2118 137 0 13 chr2 145477543 145477858 -105209996 + AluSx SINE Alu 1 311 -1 328 299 80 72 chr2 145477858 145478128 -105209726 + L1M4 LINE L1 4671 4951 -1195 237 239 0 0 chr2 145478250 145478296 -105209558 + (CA)n Simple_repeat Simple_repeat 2 47 0 25 51 0 0 chr2 145478297 145478336 -105209518 + AT_rich Low_complexity Low_complexity 1 39 0 842 264 108 54 chr2 145479669 145480059 -105207795 + L2 LINE L2 2461 2871 -443 657 36 0 0 chr2 145480134 145480218 -105207636 + (TA)n Simple_repeat Simple_repeat 2 85 0 463 237 10 0 chr2 145480219 145480316 -105207538 + L2 LINE L2 3165 3262 -51 296 278 6 102 chr2 145480381 145480557 -105207297 - L2 LINE L2 -586 2728 2570 230 314 0 12 chr2 145480917 145481003 -105206851 - 5S rRNA rRNA -5 116 32 23 0 0 0 chr2 145481995 145482018 -105205836 + AT_rich Low_complexity Low_complexity 1 23 0 1115 228 145 25 chr2 145482289 145482798 -105205056 - L2 LINE L2 -271 3042 2450 1047 240 123 15 chr2 145482821 145483243 -105204611 - MLT1D LTR MaLR -4 486 18 264 319 62 18 chr2 145483489 145483602 -105204252 - L2 LINE L2 0 3313 3196 3270 111 81 14 chr2 145484230 145484724 -105203130 + MER1A DNA MER1_type 1 527 0 251 254 0 16 chr2 145484781 145484844 -105203010 + MIR SINE MIR 201 262 0 24 32 0 0 chr2 145484844 145484875 -105202979 + AT_rich Low_complexity Low_complexity 1 31 0 253 283 87 87 chr2 145485116 145485381 -105202473 + L2 LINE L2 2811 3075 -197 339 323 42 21 chr2 145485507 145485696 -105202158 + MIR SINE MIR 70 262 0 206 368 61 18 chr2 145485696 145485810 -105202044 + L2 LINE L2 3119 3237 -35 256 252 189 18 chr2 145487469 145487580 -105200274 - MIR3 SINE MIR -49 159 30 1417 232 3 22 chr2 145487651 145488009 -105199845 + MLT1A2 LTR MaLR 1 351 -23 238 366 11 0 chr2 145489277 145489370 -105198484 - MIR SINE MIR -116 146 53 637 215 63 13 chr2 145489401 145489559 -105198295 + L2 LINE L2 1792 1957 -1357 1342 249 40 53 chr2 145489746 145490373 -105197481 - L1MC4a LINE L1 -1845 5963 5345 1406 291 102 64 chr2 145490381 145491607 -105196247 + L2 LINE L2 2033 3307 -6 461 238 19 9 chr2 145492095 145492200 -105195654 - MIR SINE MIR -96 166 61 294 301 30 75 chr2 145492463 145492596 -105195258 + L2 LINE L2 3146 3272 0 1505 223 44 18 chr2 145493000 145493386 -105194468 - MSTD LTR MaLR 0 396 1 3022 241 69 25 chr2 145493388 145494463 -105193391 - MSTD-int LTR MaLR -2 1733 534 243 0 0 0 chr2 145494463 145494490 -105193364 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3229 29 3 0 chr2 145494509 145494892 -105192962 - L1PA3 LINE L1 -2 6153 5770 1290 129 31 23 chr2 145496046 145496302 -105191552 - L1MA4 LINE L1 -5 6295 6038 1048 49 14 21 chr2 145496302 145496444 -105191410 - AluYb8 SINE Alu -11 307 167 8365 157 13 42 chr2 145496444 145497372 -105190482 - L1MA4 LINE L1 -251 6049 5096 2042 133 16 31 chr2 145497372 145497689 -105190165 - AluSx SINE Alu 0 312 1 8365 157 13 42 chr2 145497689 145497989 -105189865 - L1MA4 LINE L1 -1204 5096 4789 2127 142 7 0 chr2 145497989 145498299 -105189555 - AluSx SINE Alu 0 312 1 8365 157 13 42 chr2 145498299 145499622 -105188232 - L1MA4 LINE L1 -1511 4789 3562 203 321 194 8 chr2 145499717 145499851 -105188003 - MIR3 SINE MIR -46 162 4 22 35 0 0 chr2 145500274 145500303 -105187551 + AT_rich Low_complexity Low_complexity 1 29 0 7598 17 10 0 chr2 145500433 145501475 -105186379 - L1PA2 LINE L1 -1 6154 5104 12674 28 1 5 chr2 145501475 145503055 -105184799 + L1PA2 LINE L1 3534 5106 -1040 2023 241 48 6 chr2 145503054 145503578 -105184276 - MSTD-int LTR MaLR -1188 547 2 * 1256 239 66 21 chr2 145503580 145503957 -105183897 - MSTD LTR MaLR 0 396 3 348 333 67 0 chr2 145504565 145504715 -105183139 - MIR SINE MIR -6 256 97 2255 114 0 0 chr2 145504743 145505040 -105182814 - AluSq SINE Alu -16 297 1 4247 143 11 7 chr2 145505137 145505855 -105181999 + L1MB2 LINE L1 5448 6168 -3 681 213 20 7 chr2 145507735 145507885 -105179969 + MIR SINE MIR 98 249 -13 40896 38 24 1 chr2 145508615 145514298 -105173556 - L1P1 LINE L1 -344 5811 2 6008 187 18 1 chr2 145514313 145515591 -105172263 - L1 LINE L1 -2579 4269 2970 341 159 29 29 chr2 145515594 145515663 -105172191 + Tigger2 DNA MER2_type 1 69 -2649 * 2237 160 40 7 chr2 145515661 145516086 -105171768 + Tigger2 DNA MER2_type 2280 2718 0 1582 193 28 20 chr2 145516096 145516542 -105171312 - L1PA15-16 LINE L1 -3890 2958 2536 382 83 28 0 chr2 145516918 145516990 -105170864 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 710 296 36 24 chr2 145518821 145519071 -105168783 + MIR SINE MIR 10 262 0 293 234 85 0 chr2 145520492 145520586 -105167268 + MER103 DNA DNA 9 110 -56 381 232 42 0 chr2 145521269 145521364 -105166490 - L2 LINE L2 -8 3305 3207 2257 128 0 3 chr2 145521384 145521697 -105166157 - AluSx SINE Alu 0 312 1 183 222 22 22 chr2 145521754 145521799 -105166055 - MIR SINE MIR -114 148 104 344 325 123 7 chr2 145521818 145521972 -105165882 - MIR3 SINE MIR -27 181 10 25 0 0 0 chr2 145523508 145523533 -105164321 + AT_rich Low_complexity Low_complexity 1 25 0 276 297 81 20 chr2 145524500 145524693 -105163161 + Charlie8 DNA MER1_type 5 201 -2216 216 97 0 0 chr2 145524736 145524767 -105163087 + (T)n Simple_repeat Simple_repeat 1 31 0 413 345 81 7 chr2 145526787 145526935 -105160919 - MIR3 SINE MIR -20 188 30 545 88 125 0 chr2 145527679 145527759 -105160095 + 5S rRNA rRNA 1 90 -31 2365 234 52 27 chr2 145528096 145529109 -105158745 - L1ME LINE L1 -4814 1832 875 1795 180 13 10 chr2 145529469 145529819 -105158035 - AluJo SINE Alu 0 351 1 312 127 0 0 chr2 145529869 145529924 -105157930 + (CAG)n Simple_repeat Simple_repeat 3 57 0 306 306 21 7 chr2 145529977 145530121 -105157733 - L1ME LINE L1 -6306 236 91 423 266 131 11 chr2 145530595 145530792 -105157062 - MIR SINE MIR -12 250 5 21 57 0 0 chr2 145531011 145531046 -105156808 + AT_rich Low_complexity Low_complexity 1 35 0 1215 268 45 21 chr2 145531067 145531489 -105156365 - LTR16A LTR ERVL -1 449 18 306 328 15 30 chr2 145531547 145531678 -105156176 - L2 LINE L2 0 3313 3185 757 243 50 0 chr2 145532836 145533058 -105154796 - MER46C DNA MER2_type -104 234 2 2462 160 37 2 chr2 145533339 145533746 -105154108 + MSTB LTR MaLR 2 422 -4 295 257 138 35 chr2 145533874 145534351 -105153503 + HAL1 LINE L1 803 1354 -1153 2323 91 0 3 chr2 145534661 145534957 -105152897 - AluSx SINE Alu -17 295 1 274 133 143 76 chr2 145535095 145535169 -105152685 + L1ME4a LINE L1 6008 6092 -29 2787 135 18 34 chr2 145535169 145535606 -105152248 + MSTB1 LTR MaLR 3 432 0 274 133 143 76 chr2 145535606 145535636 -105152218 + L1ME4a LINE L1 6092 6119 -2 22 0 0 0 chr2 145536670 145536692 -105151162 + AT_rich Low_complexity Low_complexity 1 22 0 544 289 91 5 chr2 145537326 145537513 -105150341 + MIR SINE MIR 30 232 -30 479 246 18 9 chr2 145537628 145537738 -105150116 + MER81 DNA DNA 3 113 -1 195 370 65 42 chr2 145537863 145538125 -105149729 - L2 LINE L2 -338 2975 2709 411 280 46 100 chr2 145538924 145539163 -105148691 - MIR SINE MIR -24 238 13 2042 106 31 126 chr2 145539262 145539676 -105148178 + THE1C LTR MaLR 1 375 0 495 0 0 0 chr2 145540953 145541008 -105146846 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 2589 118 30 3 chr2 145541499 145541864 -105145990 + THE1C LTR MaLR 1 375 0 351 184 172 11 chr2 145542190 145542299 -105145555 - AluSg/x SINE Alu 0 301 179 26 0 0 0 chr2 145542916 145542942 -105144912 + AT_rich Low_complexity Low_complexity 1 26 0 1275 212 117 49 chr2 145543567 145543978 -105143876 - MLT1J1 LTR MaLR 0 446 8 772 283 34 17 chr2 145545051 145545312 -105142542 + MIR SINE MIR 2 262 0 228 35 0 0 chr2 145545939 145545968 -105141886 + (A)n Simple_repeat Simple_repeat 1 29 0 227 173 181 105 chr2 145547247 145547380 -105140474 + MLT1K LTR MaLR 183 325 -263 1371 183 37 7 chr2 145548192 145548465 -105139389 - Tigger2a DNA MER2_type -153 281 1 1955 146 119 99 chr2 145548466 145548919 -105138935 - MLT2B2 LTR ERVL -50 465 4 198 303 243 20 chr2 145549251 145549403 -105138451 - MIR3 SINE MIR -3 205 20 213 163 0 0 chr2 145551642 145551691 -105136163 + CT-rich Low_complexity Low_complexity 2 50 0 309 258 65 11 chr2 145551921 145552014 -105135840 - MLT1L LTR MaLR -517 98 1 961 270 132 42 chr2 145552081 145552536 -105135318 + MLT1L LTR MaLR 103 598 -17 1764 106 4 0 chr2 145552546 145552792 -105135062 + L1MA5A LINE L1 6048 6294 -3 986 232 97 16 chr2 145553416 145553735 -105134119 - MLT1C LTR MaLR -8 459 115 5517 145 228 86 chr2 145553735 145555221 -105132633 + pTR5 LTR ERV1 743 2438 0 273 158 195 61 chr2 145555270 145555352 -105132502 - MLT1C LTR MaLR -367 100 8 293 379 52 0 chr2 145557421 145557537 -105130317 + L2 LINE L2 3151 3272 0 464 221 93 50 chr2 145558888 145559028 -105128826 - L2 LINE L2 0 3313 3168 197 391 11 0 chr2 145559029 145559121 -105128733 - L2 LINE L2 -66 3206 3114 1576 154 45 41 chr2 145559297 145559589 -105128265 + AluSx SINE Alu 2 294 -18 21 0 0 0 chr2 145559938 145559959 -105127895 + AT_rich Low_complexity Low_complexity 1 21 0 204 214 24 0 chr2 145560945 145560987 -105126867 - L2 LINE L2 -16 3256 3214 560 304 48 35 chr2 145561449 145561679 -105126175 + MIR SINE MIR 14 246 -16 666 244 35 63 chr2 145561864 145562061 -105125793 - L1MEc LINE L1 -5236 1160 974 1337 164 24 0 chr2 145562061 145562274 -105125580 + MER20 DNA MER1_type 2 219 0 666 244 35 63 chr2 145562274 145562395 -105125459 - L1MEc LINE L1 -5422 974 851 560 304 48 35 chr2 145563008 145563238 -105124616 + MIR SINE MIR 14 246 -16 3809 230 45 27 chr2 145563423 145563617 -105124237 - L1MEc LINE L1 -5236 1160 971 1309 164 23 5 chr2 145563617 145563831 -105124023 + MER20 DNA MER1_type 2 219 0 3809 230 45 27 chr2 145563831 145564721 -105123133 - L1MEc LINE L1 -5425 971 56 1498 204 91 59 chr2 145566257 145566697 -105121157 + MSTB2 LTR MaLR 1 454 -3 219 302 0 0 chr2 145567182 145567235 -105120619 + L2 LINE L2 3216 3268 -4 542 15 0 15 chr2 145567344 145567412 -105120442 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 462 285 56 34 chr2 145567643 145567822 -105120032 + MIR3 SINE MIR 16 198 -10 188 246 0 53 chr2 145568027 145568084 -105119770 - MER5A DNA MER1_type 0 189 136 2116 96 28 7 chr2 145568301 145568592 -105119262 + AluSg1 SINE Alu 1 297 -12 26 30 0 0 chr2 145568804 145568837 -105119017 + AT_rich Low_complexity Low_complexity 1 33 0 947 158 6 6 chr2 145570316 145570474 -105117380 + AluJb SINE Alu 137 294 -18 886 259 24 0 chr2 145570484 145570696 -105117158 + MIR SINE MIR 41 257 -5 665 227 81 20 chr2 145571475 145571673 -105116181 + MIR SINE MIR 9 218 -44 2373 99 0 0 chr2 145573230 145573542 -105114312 - AluSq SINE Alu -1 312 1 21 0 0 0 chr2 145573696 145573717 -105114137 + AT_rich Low_complexity Low_complexity 1 21 0 189 316 105 0 chr2 145574500 145574557 -105113297 + MIR3 SINE MIR 92 154 -54 1589 151 43 49 chr2 145575212 145575536 -105112318 + MER33 DNA MER1_type 1 322 -2 2118 109 17 3 chr2 145575705 145575999 -105111855 - AluSx SINE Alu -14 298 1 552 269 93 93 chr2 145576071 145576535 -105111319 - L2 LINE L2 -5 3267 2804 630 276 96 76 chr2 145576596 145576940 -105110914 + MLT1H LTR MaLR 5 355 -194 198 0 0 0 chr2 145577123 145577145 -105110709 + (T)n Simple_repeat Simple_repeat 1 22 0 1910 156 71 9 chr2 145577213 145577553 -105110301 + MER46B DNA MER2_type 1 236 0 564 299 23 11 chr2 145578353 145578530 -105109324 + MIR SINE MIR 29 207 -55 304 175 0 35 chr2 145579075 145579132 -105108722 - L2 LINE L2 -1 3271 3217 1166 278 120 5 chr2 145579197 145579612 -105108242 + LTR33A LTR ERVL 67 515 -8 1987 119 93 40 chr2 145579618 145579972 -105107882 + THE1C LTR MaLR 1 373 -2 286 235 106 12 chr2 145580141 145580226 -105107628 + MER5A DNA MER1_type 13 105 -84 399 244 0 0 chr2 145580980 145581058 -105106796 + MER21B LTR ERV1 17 94 -769 * 2263 184 52 27 chr2 145581046 145581491 -105106363 + MER21B LTR ERV1 388 843 -20 299 243 29 52 chr2 145581504 145581640 -105106214 + MIR SINE MIR 58 190 -72 21 36 0 0 chr2 145581820 145581848 -105106006 + AT_rich Low_complexity Low_complexity 1 28 0 374 268 49 32 chr2 145581952 145582075 -105105779 - L2 LINE L2 -4 3309 3185 1336 330 72 35 chr2 145582413 145583387 -105104467 - L2 LINE L2 -9 3263 2244 377 265 68 8 chr2 145583733 145583850 -105104004 - L2 LINE L2 -4 3309 3186 860 328 83 51 chr2 145584187 145585165 -105102689 - L2 LINE L2 -9 3263 2244 757 256 67 26 chr2 145585434 145585753 -105102101 + MLT1J LTR MaLR 28 406 -105 922 282 106 37 chr2 145586132 145586183 -105101671 - MLT1H LTR MaLR 0 549 503 1279 201 53 66 chr2 145586183 145586562 -105101292 + MLT1A2 LTR MaLR 1 374 0 922 282 106 37 chr2 145586562 145586943 -105100911 - MLT1H LTR MaLR -46 503 87 244 258 89 13 chr2 145587106 145587239 -105100615 + MIR SINE MIR 29 227 -35 918 229 50 18 chr2 145587504 145587741 -105100113 - MIR SINE MIR 0 262 24 268 256 181 19 chr2 145588021 145588181 -105099673 + L2 LINE L2 1759 1944 -1370 321 274 212 17 chr2 145588485 145588664 -105099190 - MIR SINE MIR -2 260 47 657 287 68 48 chr2 145589861 145590154 -105097700 - L2 LINE L2 -1 3312 3014 324 60 0 0 chr2 145590728 145590778 -105097076 - Alu SINE Alu 0 300 251 380 258 102 18 chr2 145591190 145591415 -105096439 + L1ME4a LINE L1 5876 6119 -2 486 315 90 56 chr2 145591969 145592413 -105095441 + L2 LINE L2 2812 3270 -2 538 244 106 28 chr2 145592504 145592684 -105095170 - MIR SINE MIR -55 207 14 192 352 0 28 chr2 145592683 145592754 -105095100 + MIR SINE MIR 40 108 -154 * 499 248 118 19 chr2 145592798 145592959 -105094895 - MER5B DNA MER1_type -1 177 1 356 291 199 0 chr2 145592967 145593118 -105094736 - MER5A DNA MER1_type 0 189 9 762 287 57 16 chr2 145595537 145595851 -105092003 + MER102b DNA MER1_type 1 327 -14 409 294 42 8 chr2 145596018 145596137 -105091717 + MIR SINE MIR 30 152 -56 242 290 65 21 chr2 145597227 145597320 -105090534 + MIR SINE MIR 58 154 -108 23 62 0 0 chr2 145598173 145598205 -105089649 + AT_rich Low_complexity Low_complexity 1 32 0 716 195 8 0 chr2 145598206 145598334 -105089520 - FLAM_A SINE Alu -1 132 4 224 39 0 0 chr2 145598693 145598719 -105089135 + (TTG)n Simple_repeat Simple_repeat 2 27 0 180 0 0 0 chr2 145600142 145600162 -105087692 + (A)n Simple_repeat Simple_repeat 1 20 0 1662 207 58 36 chr2 145600579 145601029 -105086825 + MLT1C LTR MaLR 8 467 0 900 300 106 10 chr2 145601899 145602296 -105085558 + L2 LINE L2 2430 2864 -450 847 189 53 0 chr2 145602351 145602520 -105085334 - MER5B DNA MER1_type 0 178 1 508 306 117 46 chr2 145602570 145602851 -105085003 + L2 LINE L2 3005 3305 -8 259 346 14 57 chr2 145603135 145603302 -105084552 - MER5B DNA MER1_type 0 189 19 194 323 143 23 chr2 145604077 145604210 -105083644 + MIR3 SINE MIR 7 155 -53 234 237 149 26 chr2 145605195 145605309 -105082545 - MIR SINE MIR -70 192 65 202 321 23 76 chr2 145605417 145605548 -105082306 + L2 LINE L2 3184 3307 -6 655 289 55 50 chr2 145605983 145606384 -105081470 - L1MC4a LINE L1 -1878 5930 5528 358 169 99 0 chr2 145606708 145606779 -105081075 - MIR SINE MIR -93 169 92 180 0 0 0 chr2 145607673 145607693 -105080161 + (CA)n Simple_repeat Simple_repeat 2 21 0 293 259 63 133 chr2 145607707 145607758 -105080096 - L2 LINE L2 -3 3269 3216 1968 122 7 30 chr2 145607758 145608062 -105079792 + AluSx SINE Alu 1 297 -15 293 259 63 133 chr2 145608062 145608153 -105079701 - L2 LINE L2 -56 3216 3137 2627 151 20 7 chr2 145608269 145608714 -105079140 - LTR32 LTR ERVL -6 465 15 371 51 0 85 chr2 145608714 145608773 -105079081 - LTR32 LTR ERVL -403 68 15 422 300 40 7 chr2 145608863 145609013 -105078841 + MLT1I LTR MaLR 1 155 -254 2060 295 89 53 chr2 145609250 145610893 -105076961 - L2 LINE L2 0 3313 1607 204 154 0 26 chr2 145610893 145610932 -105076922 + GA-rich Low_complexity Low_complexity 1 38 0 194 338 42 0 chr2 145611202 145611273 -105076581 - L3 LINE CR1 -64 1513 1440 845 185 19 6 chr2 145611415 145611572 -105076282 + MER5A DNA MER1_type 27 185 -4 296 293 61 0 chr2 145613262 145613361 -105074493 - MIR SINE MIR -64 198 94 1490 173 86 138 chr2 145614070 145614619 -105073235 + MLT2B1 LTR ERVL 1 520 0 439 284 30 111 chr2 145615298 145615668 -105072186 + L1ME4a LINE L1 5553 5892 -229 871 198 72 27 chr2 145615677 145615899 -105071955 - MIR SINE MIR 0 262 31 519 279 25 99 chr2 145616574 145616689 -105071165 - L1ME4a LINE L1 -188 5933 5811 2269 119 7 0 chr2 145616689 145616992 -105070862 - AluSx SINE Alu -7 305 1 519 279 25 99 chr2 145616992 145617400 -105070454 - L1ME4a LINE L1 -310 5811 5449 207 0 0 0 chr2 145618160 145618183 -105069671 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 675 331 142 27 chr2 145618185 145618635 -105069219 + MLT1K LTR MaLR 21 522 -66 1938 139 10 10 chr2 145618913 145619223 -105068631 + AluSx SINE Alu 1 310 -2 2343 73 0 7 chr2 145619568 145619870 -105067984 + AluY SINE Alu 1 300 -11 2154 100 7 13 chr2 145620033 145620334 -105067520 + AluSx SINE Alu 1 299 -13 807 237 6 6 chr2 145621415 145621592 -105066262 + MIR SINE MIR 78 254 -8 270 116 0 0 chr2 145621592 145621635 -105066219 + (ATG)n Simple_repeat Simple_repeat 2 44 0 355 290 166 41 chr2 145623282 145623427 -105064427 - MER5A DNA MER1_type -1 188 26 219 69 0 0 chr2 145623520 145623549 -105064305 + (TA)n Simple_repeat Simple_repeat 1 29 0 234 0 0 0 chr2 145623554 145623580 -105064274 + (CA)n Simple_repeat Simple_repeat 2 27 0 489 260 80 55 chr2 145623667 145623867 -105063987 - L2 LINE L2 -37 3276 3072 186 347 0 91 chr2 145624275 145624451 -105063403 - MIR3 SINE MIR -37 171 12 21 0 0 0 chr2 145625529 145625550 -105062304 + AT_rich Low_complexity Low_complexity 1 21 0 339 25 0 0 chr2 145628261 145628301 -105059553 + (TG)n Simple_repeat Simple_repeat 2 41 0 455 309 102 29 chr2 145630040 145630158 -105057696 + L3 LINE CR1 768 876 -701 228 111 0 0 chr2 145630158 145630194 -105057660 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 455 309 102 29 chr2 145630194 145630389 -105057465 + L3 LINE CR1 876 1104 -473 22 0 0 0 chr2 145630474 145630496 -105057358 + AT_rich Low_complexity Low_complexity 1 22 0 1577 146 47 33 chr2 145630498 145630773 -105057081 + AluJo SINE Alu 3 281 -31 701 231 6 26 chr2 145631105 145631261 -105056593 - MER5B DNA MER1_type 0 178 26 554 88 0 0 chr2 145631577 145631657 -105056197 - L1PA8 LINE L1 -2 6170 6091 489 90 0 0 chr2 145631657 145631724 -105056130 + L1PA7 LINE L1 6022 6088 -66 1433 150 135 8 chr2 145631881 145632148 -105055706 + AluJb SINE Alu 1 301 -11 199 231 19 0 chr2 145633552 145633604 -105054250 + L2 LINE L2 3214 3266 -6 334 235 151 36 chr2 145633618 145633784 -105054070 - MER113 DNA MER1_type? -1 520 336 341 252 23 0 chr2 145633807 145633938 -105053916 - MER113 DNA MER1_type? -344 177 44 449 248 85 7 chr2 145634165 145634306 -105053548 + MER105 DNA DNA 51 202 -2 386 311 74 14 chr2 145634662 145634810 -105053044 + MIR SINE MIR 35 191 -71 234 0 0 0 chr2 145635473 145635499 -105052355 + (T)n Simple_repeat Simple_repeat 1 26 0 646 145 0 8 chr2 145635965 145636082 -105051772 + (TCTA)n Simple_repeat Simple_repeat 1 116 0 21 67 0 0 chr2 145636305 145636335 -105051519 + AT_rich Low_complexity Low_complexity 1 30 0 314 253 41 14 chr2 145637443 145637589 -105050265 - L1ME4a LINE L1 -4 6117 5968 249 108 0 0 chr2 145637755 145637792 -105050062 + (CA)n Simple_repeat Simple_repeat 1 37 0 303 263 149 14 chr2 145638187 145638301 -105049553 - MER5B DNA MER1_type -62 126 5 1343 231 57 30 chr2 145638831 145639238 -105048616 - MLT1F1 LTR MaLR 0 567 150 25 65 0 0 chr2 145639722 145639768 -105048086 + AT_rich Low_complexity Low_complexity 1 46 0 280 102 0 41 chr2 145639768 145639817 -105048037 - L1PA16 LINE L1 -14 6152 6106 586 209 0 0 chr2 145639852 145639962 -105047892 - MLT1F1 LTR MaLR -457 110 1 2552 42 0 10 chr2 145640913 145641222 -105046632 + AluY SINE Alu 1 306 -5 455 249 157 35 chr2 145641471 145641683 -105046171 - MIR SINE MIR -14 248 11 1771 204 11 16 chr2 145641939 145642306 -105045548 + MLT1A1 LTR MaLR 1 365 0 181 243 27 0 chr2 145644095 145644132 -105043722 - L2 LINE L2 -37 3276 3239 347 282 49 28 chr2 145644179 145644321 -105043533 + MER5A DNA MER1_type 36 180 -9 755 256 47 17 chr2 145644888 145645122 -105042732 - MIR SINE MIR -6 256 16 234 264 64 56 chr2 145645787 145645912 -105041942 - L2 LINE L2 -2584 730 605 210 118 0 0 chr2 145646065 145646099 -105041755 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 997 154 0 0 chr2 145646121 145646290 -105041564 + (TA)n Simple_repeat Simple_repeat 1 169 0 276 30 0 0 chr2 145646546 145646579 -105041275 + (GA)n Simple_repeat Simple_repeat 1 33 0 1861 151 70 12 chr2 145646638 145646982 -105040872 - MLT1A1 LTR MaLR -1 364 1 268 209 217 23 chr2 145647947 145648076 -105039778 + L2 LINE L2 3158 3311 -2 1603 174 62 62 chr2 145649974 145650406 -105037448 + MLT1D LTR MaLR 1 432 -73 278 87 0 0 chr2 145650405 145650451 -105037403 - MLT1D LTR MaLR -23 482 437 * 24 53 0 0 chr2 145650467 145650505 -105037349 + AT_rich Low_complexity Low_complexity 1 38 0 405 160 0 0 chr2 145650539 145650614 -105037240 + MLT1D LTR MaLR 431 505 0 1959 214 96 68 chr2 145651022 145651169 -105036685 - LTR41 LTR ERVL -2 793 652 3362 126 2 22 chr2 145651169 145651718 -105036136 + L1PA13 LINE L1 5620 6157 -6 1959 214 96 68 chr2 145651718 145652321 -105035533 - LTR41 LTR ERVL -143 652 3 6359 179 50 11 chr2 145652330 145653728 -105034126 + Charlie1a DNA MER1_type 3 1455 0 280 179 103 39 chr2 145653731 145653809 -105034045 + L3 LINE CR1 1322 1404 -173 329 358 21 21 chr2 145653812 145654002 -105033852 + L1MC/D LINE L1 5399 5588 -2220 23 0 0 0 chr2 145654250 145654273 -105033581 + AT_rich Low_complexity Low_complexity 1 23 0 1489 180 13 43 chr2 145654325 145654630 -105033224 - AluJb SINE Alu -16 296 1 189 339 43 43 chr2 145654860 145654975 -105032879 + L3 LINE CR1 1333 1447 -130 187 278 24 95 chr2 145657274 145657400 -105030454 - L2 LINE L2 -496 2818 2702 28542 114 12 67 chr2 145657510 145664004 -105023850 + L1PA7 LINE L1 22 6147 -7 279 0 0 0 chr2 145664077 145664108 -105023746 + (TG)n Simple_repeat Simple_repeat 2 32 0 1723 224 37 4 chr2 145665632 145666122 -105021732 + Charlie4a DNA MER1_type 3 508 0 25 31 0 0 chr2 145666459 145666491 -105021363 + AT_rich Low_complexity Low_complexity 1 32 0 281 288 12 25 chr2 145666620 145666700 -105021154 + MIR SINE MIR 70 148 -60 23 0 0 0 chr2 145667157 145667180 -105020674 + AT_rich Low_complexity Low_complexity 1 23 0 622 203 7 14 chr2 145667410 145667548 -105020306 - Tigger7 DNA MER2_type -8 2479 2343 1132 87 0 0 chr2 145667548 145667698 -105020156 + AluSg/x SINE Alu 162 311 -1 607 56 149 19 chr2 145667698 145667805 -105020049 - Tigger7 DNA MER2_type -137 2354 2234 267 182 0 18 chr2 145667806 145667861 -105019993 - Tigger7 DNA MER2_type -651 54 1 1501 337 125 27 chr2 145669599 145670091 -105017763 - L2 LINE L2 -4 3309 2866 2683 156 35 39 chr2 145670091 145670604 -105017250 + MLT2B2 LTR ERVL 5 515 0 1501 337 125 27 chr2 145670604 145671621 -105016233 - L2 LINE L2 -447 2866 1638 378 313 76 24 chr2 145671690 145671901 -105015953 - L2 LINE L2 -2191 1123 902 215 373 88 27 chr2 145672507 145672767 -105015087 - L2 LINE L2 -19 3253 2978 296 274 69 123 chr2 145673124 145673401 -105014453 - LTR67 LTR ERVL -294 263 2 371 219 29 80 chr2 145673404 145673541 -105014313 - MIR SINE MIR -118 144 15 513 194 0 22 chr2 145675291 145675425 -105012429 + (TCCA)n Simple_repeat Simple_repeat 3 133 0 2607 235 36 8 chr2 145675437 145676071 -105011783 + MER82 DNA MER2_type 2 653 0 603 220 0 0 chr2 145676102 145676359 -105011495 + (TCCA)n Simple_repeat Simple_repeat 1 257 0 486 206 19 9 chr2 145676488 145676595 -105011259 + L2 LINE L2 3206 3313 0 180 375 0 0 chr2 145677086 145677174 -105010680 - L3b LINE CR1 -351 1232 1145 391 298 51 28 chr2 145677780 145677958 -105009896 - MIR SINE MIR -58 204 23 256 181 108 12 chr2 145678013 145678096 -105009758 - L1ME4a LINE L1 -3 6118 6028 227 301 7 22 chr2 145678115 145678251 -105009603 + (TA)n Simple_repeat Simple_repeat 1 134 0 554 291 75 15 chr2 145678348 145678609 -105009245 - L1ME4a LINE L1 -362 5759 5518 2500 126 60 5 chr2 145679412 145679847 -105008007 - L1PA13 LINE L1 -2 6161 5703 1851 163 3 14 chr2 145680618 145680913 -105006941 - AluJo SINE Alu -20 292 1 247 267 116 12 chr2 145682049 145682135 -105005719 - L2 LINE L2 -11 3302 3208 260 250 0 0 chr2 145682265 145682317 -105005537 - L2 LINE L2 -20 3293 3242 21 36 0 0 chr2 145682952 145682980 -105004874 + AT_rich Low_complexity Low_complexity 1 28 0 380 326 153 0 chr2 145684130 145684345 -105003509 - MIR SINE MIR -14 248 1 21 0 0 0 chr2 145685591 145685612 -105002242 + AT_rich Low_complexity Low_complexity 1 21 0 303 71 0 0 chr2 145687679 145687721 -105000133 + (TTTTC)n Simple_repeat Simple_repeat 2 43 0 1854 133 0 82 chr2 145687740 145688057 -104999797 - AluSx SINE Alu -21 291 1 248 250 0 0 chr2 145688333 145688385 -104999469 + GA-rich Low_complexity Low_complexity 3 54 0 342 45 0 0 chr2 145688488 145688532 -104999322 + (CA)n Simple_repeat Simple_repeat 2 45 0 189 171 0 0 chr2 145690042 145690077 -104997777 + (CA)n Simple_repeat Simple_repeat 2 36 0 2191 148 44 39 chr2 145691353 145691787 -104996067 + L1MB7 LINE L1 5737 6172 -12 186 43 0 0 chr2 145691789 145691812 -104996042 + (CA)n Simple_repeat Simple_repeat 2 24 0 486 286 62 28 chr2 145692435 145692613 -104995241 - MLT1J LTR MaLR -327 184 1 1295 274 69 35 chr2 145693015 145693450 -104994404 - MLT1J2 LTR MaLR 0 450 1 204 320 13 13 chr2 145693466 145693544 -104994310 + L2 LINE L2 2767 2844 -470 254 329 133 21 chr2 145693994 145694137 -104993717 - MER5A DNA MER1_type -29 160 2 284 283 19 66 chr2 145694146 145694252 -104993602 + MIR SINE MIR 15 115 -147 1987 153 0 7 chr2 145694531 145694839 -104993015 - AluSx SINE Alu -6 306 1 606 314 58 31 chr2 145694865 145695158 -104992696 + L3 LINE CR1 922 1222 -355 194 313 131 10 chr2 145695359 145695458 -104992396 + L3 LINE CR1 1461 1571 -6 701 205 10 8 chr2 145697165 145697310 -104990544 + MSTC LTR MaLR 3 150 -215 593 159 49 6 chr2 145697351 145697475 -104990379 + MSTC LTR MaLR 234 428 0 321 248 220 21 chr2 145697636 145697777 -104990077 + MIR SINE MIR 2 170 -92 564 318 0 0 chr2 145698507 145698661 -104989193 - MIR3 SINE MIR -6 202 49 794 255 8 55 chr2 145698663 145698918 -104988936 + MIR SINE MIR 4 246 -16 476 228 49 8 chr2 145699006 145699129 -104988725 + L2 LINE L2 2530 2657 -657 1207 263 141 50 chr2 145699134 145699639 -104988215 - MLT1G1 LTR MaLR -1 554 4 559 289 20 30 chr2 145699639 145699836 -104988018 + L2 LINE L2 2653 2847 -467 504 245 87 27 chr2 145699894 145700078 -104987776 + L2 LINE L2 3119 3313 0 238 269 65 11 chr2 145700493 145700586 -104987268 + MIR SINE MIR 96 193 -69 1734 221 118 59 chr2 145700596 145701153 -104986701 + MLT1G LTR MaLR 1 590 0 515 149 149 0 chr2 145703083 145703190 -104984664 - MSTB1 LTR MaLR 0 432 310 286 264 190 35 chr2 145704801 145704975 -104982879 + MIR3 SINE MIR 4 204 -4 3460 93 13 9 chr2 145705136 145705587 -104982267 - MLT2A2 LTR ERVL 0 453 1 237 33 0 0 chr2 145705718 145705748 -104982106 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 184 250 28 97 chr2 145705770 145705789 -104982065 + MIR SINE MIR 2 21 -241 1998 198 87 23 chr2 145705789 145706228 -104981626 + MLT1C LTR MaLR 1 467 0 184 250 28 97 chr2 145706228 145706280 -104981574 + MIR SINE MIR 21 68 -194 8496 86 10 0 chr2 145706308 145708215 -104979639 + L1PA7 LINE L1 4222 6153 -1 398 235 31 0 chr2 145708248 145708346 -104979508 + MIR SINE MIR 108 208 -54 1976 138 0 28 chr2 145708347 145708666 -104979188 + AluSx SINE Alu 1 310 -2 262 250 44 73 chr2 145708989 145709125 -104978729 + MIR SINE MIR 23 155 -54 224 273 15 0 chr2 145709920 145709986 -104977868 - L2 LINE L2 0 3313 3247 464 308 130 10 chr2 145710244 145710452 -104977402 - MIR SINE MIR -3 259 27 235 330 9 9 chr2 145711388 145711494 -104976360 + CT-rich Low_complexity Low_complexity 2 107 0 261 358 66 29 chr2 145712767 145712904 -104974950 + L2 LINE L2 3125 3266 -6 184 311 0 0 chr2 145713090 145713135 -104974719 + MIR SINE MIR 83 127 -81 299 321 68 48 chr2 145713175 145713396 -104974458 + MIR SINE MIR 22 248 -14 26 0 0 0 chr2 145713939 145713965 -104973889 + AT_rich Low_complexity Low_complexity 1 26 0 1692 217 68 14 chr2 145714034 145714389 -104973465 + MLT1A2 LTR MaLR 1 374 0 1502 203 14 46 chr2 145714913 145715169 -104972685 - L1MA7 LINE L1 -4 6287 6045 2199 100 17 3 chr2 145715169 145715459 -104972395 - AluSx SINE Alu -18 294 1 1502 203 14 46 chr2 145715459 145715572 -104972282 - L1MA7 LINE L1 -246 6045 5930 666 193 14 29 chr2 145715681 145715821 -104972033 - MLT1E1 LTR MaLR -117 537 400 762 174 217 96 chr2 145715857 145715992 -104971862 - MLT1E1 LTR MaLR -393 261 144 1954 113 0 63 chr2 145715992 145716325 -104971529 - AluSx SINE Alu 0 314 1 762 174 217 96 chr2 145716325 145716418 -104971436 - MLT1E1 LTR MaLR -510 144 4 442 248 62 9 chr2 145717007 145717120 -104970734 - MIR SINE MIR -130 132 14 2151 62 44 7 chr2 145718933 145719241 -104968613 - AluY SINE Alu 0 318 1 188 271 0 17 chr2 145719257 145719316 -104968538 - MIR SINE MIR -115 147 90 203 362 0 0 chr2 145719499 145719557 -104968297 - MIR SINE MIR -103 105 48 499 62 25 0 chr2 145720204 145720284 -104967570 + (TCTA)n Simple_repeat Simple_repeat 1 82 0 647 185 19 6 chr2 145721081 145721243 -104966611 + GA-rich Low_complexity Low_complexity 4 167 0 362 302 76 6 chr2 145721740 145721912 -104965942 - MIR SINE MIR -14 248 65 208 327 96 10 chr2 145722466 145722570 -104965284 - L2 LINE L2 -11 3261 3149 549 285 123 31 chr2 145723018 145723092 -104964762 - MIR SINE MIR -10 252 186 2085 184 28 0 chr2 145723092 145723446 -104964408 + MLT1A1 LTR MaLR 1 364 -1 549 285 123 31 chr2 145723446 145723599 -104964255 - MIR SINE MIR -76 186 4 343 259 136 0 chr2 145723908 145723989 -104963865 + L2 LINE L2 3168 3259 -13 281 308 124 24 chr2 145724044 145724246 -104963608 + MIR SINE MIR 4 226 -36 655 226 26 70 chr2 145724351 145724581 -104963273 + L1MC5 LINE L1 7302 7521 -440 2009 120 42 3 chr2 145724587 145724870 -104962984 - AluSx SINE Alu -18 294 1 370 286 45 45 chr2 145724959 145725158 -104962696 + L1ME3A LINE L1 5962 6160 -10 1133 208 23 5 chr2 145725293 145725509 -104962345 - MER58A DNA MER1_type 0 224 5 511 301 113 9 chr2 145725598 145725811 -104962043 - MARNA DNA Mariner -90 496 262 400 298 112 6 chr2 145726766 145726927 -104960927 + L3 LINE CR1 1169 1346 -231 866 292 21 0 chr2 145726983 145727226 -104960628 + MLT1H LTR MaLR 1 248 -301 375 206 177 69 chr2 145727352 145727471 -104960383 + MLT1H LTR MaLR 449 549 0 245 288 27 27 chr2 145727640 145727751 -104960103 - L3 LINE CR1 -790 787 677 277 282 13 0 chr2 145727854 145727932 -104959922 + MIR3 SINE MIR 11 89 -119 1731 163 42 33 chr2 145728485 145728817 -104959037 + THE1B LTR MaLR 30 364 0 378 311 25 8 chr2 145730280 145730402 -104957452 + MIR SINE MIR 20 143 -119 504 59 0 0 chr2 145731127 145731195 -104956659 + (CA)n Simple_repeat Simple_repeat 2 69 0 491 371 133 11 chr2 145731195 145731560 -104956294 - L2 LINE L2 -38 3234 2825 183 80 0 0 chr2 145731936 145731961 -104955893 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 187 302 0 0 chr2 145731962 145732015 -104955839 - L2 LINE L2 -10 3303 3251 259 294 47 12 chr2 145732079 145732164 -104955690 + L2 LINE L2 3222 3309 -4 1745 187 0 29 chr2 145732541 145732856 -104954998 + AluJb SINE Alu 1 306 -6 240 86 0 0 chr2 145732896 145732931 -104954923 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 432 37 0 0 chr2 145732932 145732986 -104954868 + (CCTG)n Simple_repeat Simple_repeat 2 55 0 183 323 46 0 chr2 145733572 145733637 -104954217 + MIR SINE MIR 184 251 -11 2202 99 0 0 chr2 145733824 145734133 -104953721 + AluSq SINE Alu 1 309 0 206 310 17 0 chr2 145735500 145735558 -104952296 + L3 LINE CR1 570 628 -949 303 195 11 69 chr2 145735565 145735652 -104952202 + L3 LINE CR1 1268 1349 -228 3175 193 30 39 chr2 145735778 145736539 -104951315 + L1 LINE L1 4299 5052 -1094 632 246 0 0 chr2 145736539 145736657 -104951197 + FLAM_A SINE Alu 4 121 -12 577 84 72 42 chr2 145736681 145736847 -104951007 + GA-rich Low_complexity Low_complexity 5 175 0 1016 206 29 10 chr2 145739019 145739223 -104948631 - MER3 DNA MER1_type -1 208 1 22 0 0 0 chr2 145739446 145739468 -104948386 + AT_rich Low_complexity Low_complexity 1 22 0 229 299 0 52 chr2 145739646 145739743 -104948111 + MIR3 SINE MIR 117 208 0 336 313 21 10 chr2 145741515 145741611 -104946243 - L2 LINE L2 -5 3267 3171 267 361 74 20 chr2 145741618 145741820 -104946034 + L2 LINE L2 1850 2062 -1252 294 29 0 0 chr2 145742000 145742035 -104945819 + (TC)n Simple_repeat Simple_repeat 1 35 0 231 352 36 31 chr2 145742083 145742276 -104945578 + L2 LINE L2 2368 2561 -753 1669 229 36 33 chr2 145742690 145743639 -104944215 + L1ME1 LINE L1 4843 5993 -173 21 0 0 0 chr2 145744078 145744099 -104943755 + AT_rich Low_complexity Low_complexity 1 21 0 395 380 36 71 chr2 145744310 145744760 -104943094 + L2 LINE L2 2812 3245 -27 1575 174 10 10 chr2 145745252 145745546 -104942308 - AluSx SINE Alu -18 294 1 471 217 76 50 chr2 145745770 145746122 -104941732 - MER110A LTR ERV1 0 468 70 189 261 0 22 chr2 145746238 145746284 -104941570 + L2 LINE L2 3215 3259 -13 444 123 0 0 chr2 145746296 145746369 -104941485 + (TGGA)n Simple_repeat Simple_repeat 1 73 0 1177 140 0 14 chr2 145746877 145747084 -104940770 + L1PA8 LINE L1 3535 3738 -2408 751 42 0 0 chr2 145747084 145747180 -104940674 + L1PA2 LINE L1 6060 6155 0 * 11118 98 6 1 chr2 145747179 145749613 -104938241 + L1PA8 LINE L1 3729 6167 -5 283 356 10 10 chr2 145750804 145750908 -104936946 - L2 LINE L2 0 3272 3169 202 319 0 14 chr2 145751360 145751429 -104936425 - L2 LINE L2 -4 3309 3242 23 0 0 0 chr2 145751474 145751497 -104936357 + AT_rich Low_complexity Low_complexity 1 23 0 330 262 78 0 chr2 145753036 145753139 -104934715 - MLT1J2 LTR MaLR -336 114 4 2851 234 46 3 chr2 145753326 145754065 -104933789 - MER20B DNA MER1_type -11 772 2 195 309 166 29 chr2 145754202 145754341 -104933513 - L2 LINE L2 -441 2873 2716 1415 314 167 16 chr2 145754352 145755309 -104932545 - L2 LINE L2 -562 2752 1651 975 316 40 6 chr2 145755547 145755876 -104931978 + LTR16C LTR ERVL 151 490 -1 285 278 143 62 chr2 145756072 145756457 -104931397 - MLT1K LTR MaLR -2 586 171 705 366 68 18 chr2 145756574 145757123 -104930731 + L2 LINE L2 2475 3055 -217 1336 256 89 44 chr2 145758496 145758646 -104929208 + L1MC4 LINE L1 6460 6602 -1440 2131 127 7 0 chr2 145758646 145758937 -104928917 - AluSc SINE Alu -16 293 1 1336 256 89 44 chr2 145758937 145759402 -104928452 + L1MC4 LINE L1 6602 7103 -939 2362 228 41 3 chr2 145759417 145760050 -104927804 + L1MC4 LINE L1 7242 7898 -144 192 320 165 0 chr2 145760505 145760608 -104927246 - L2 LINE L2 -15 3298 3179 363 366 53 18 chr2 145764071 145764298 -104923556 - MIR SINE MIR -6 256 22 189 0 0 0 chr2 145765167 145765188 -104922666 + (T)n Simple_repeat Simple_repeat 1 21 0 2134 51 4 0 chr2 145766708 145766962 -104920892 - AluY SINE Alu -12 299 45 194 133 0 22 chr2 145767272 145767317 -104920537 + (TA)n Simple_repeat Simple_repeat 2 45 0 261 409 0 15 chr2 145767320 145767452 -104920402 - MIR SINE MIR -124 138 9 1016 185 60 28 chr2 145767569 145767785 -104920069 - MER58A DNA MER1_type -1 223 1 247 336 145 15 chr2 145768650 145768781 -104919073 + MIR SINE MIR 31 178 -84 458 252 65 19 chr2 145770146 145770301 -104917553 + MIR SINE MIR 101 262 0 261 0 0 0 chr2 145771144 145771173 -104916681 + (CA)n Simple_repeat Simple_repeat 2 30 0 530 116 53 11 chr2 145771248 145771343 -104916511 - MER63 DNA MER1_type -311 751 27 23 33 0 0 chr2 145772150 145772180 -104915674 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr2 145772562 145772604 -104915250 + AT_rich Low_complexity Low_complexity 1 42 0 294 95 0 0 chr2 145772631 145772673 -104915181 + (TG)n Simple_repeat Simple_repeat 2 43 0 1741 198 123 5 chr2 145772677 145773106 -104914748 - MLT2B1 LTR ERVL -40 480 1 311 104 0 0 chr2 145773226 145773274 -104914580 + MLT2B1 LTR ERVL 473 520 0 480 313 101 49 chr2 145773512 145774207 -104913647 - L1 LINE L1 -757 5389 4627 4144 71 4 0 chr2 145774441 145774974 -104912880 - L1PA7 LINE L1 -4 6150 5616 24 77 0 0 chr2 145775377 145775429 -104912425 + AT_rich Low_complexity Low_complexity 1 52 0 225 343 0 0 chr2 145775730 145775803 -104912051 - MIR3 SINE MIR -25 183 111 429 173 59 0 chr2 145776181 145776279 -104911575 - L1MA9 LINE L1 -161 6130 6028 534 175 109 22 chr2 145776279 145776416 -104911438 + L1MA9 LINE L1 6132 6280 -32 1217 276 38 10 chr2 145776603 145777001 -104910853 - L1PA12 LINE L1 -6103 1478 1070 4709 67 106 2 chr2 145777001 145777624 -104910230 + LTR12 LTR ERV1 1 688 0 29724 96 5 7 chr2 145777648 145782717 -104905137 + HERV9 LTR ERV1 58 5197 -3202 11526 80 18 10 chr2 145782715 145784372 -104903482 + HERV9 LTR ERV1 6699 8369 -30 * 1604 277 96 43 chr2 145784372 145784402 -104903452 - L1PA12 LINE L1 -6753 828 801 4585 69 108 11 chr2 145784402 145785029 -104902825 + LTR12 LTR ERV1 1 688 0 1604 277 96 43 chr2 145785029 145785779 -104902075 - L1PA12 LINE L1 -6780 801 7 1828 142 139 16 chr2 145785877 145786257 -104901597 + MSTA LTR MaLR 2 428 0 9824 133 8 36 chr2 145786259 145787882 -104899972 + MSTA-int LTR MaLR 3 1580 0 1366 134 214 27 chr2 145787882 145788200 -104899654 + MSTA LTR MaLR 1 390 -38 218 138 43 75 chr2 145788681 145788775 -104899079 + (TTATA)n Simple_repeat Simple_repeat 1 91 0 3795 201 15 73 chr2 145788932 145789663 -104898191 + L1MA9 LINE L1 4879 5651 -661 633 125 0 10 chr2 145789663 145789767 -104898087 + U13 snRNA snRNA 1 103 -1 3795 201 15 73 chr2 145789767 145789984 -104897870 + L1MA9 LINE L1 5651 5879 -433 15793 139 27 8 chr2 145789984 145792650 -104895204 + Tigger2 DNA MER2_type 2 2717 -1 3795 201 15 73 chr2 145792650 145793181 -104894673 + L1MA9 LINE L1 5879 6274 -38 35 0 0 0 chr2 145793181 145793216 -104894638 + AT_rich Low_complexity Low_complexity 1 35 0 340 259 37 0 chr2 145793761 145793842 -104894012 + LTR33A LTR ERVL 440 523 0 567 308 95 71 chr2 145793842 145794799 -104893055 - L1M4 LINE L1 -2142 4004 3025 866 244 20 24 chr2 145794970 145795216 -104892638 + MIR SINE MIR 18 262 0 234 130 10 70 chr2 145796629 145796729 -104891125 + (GGGGA)n Simple_repeat Simple_repeat 4 97 0 216 0 0 0 chr2 145797321 145797345 -104890509 + (T)n Simple_repeat Simple_repeat 1 24 0 234 351 0 14 chr2 145797585 145797659 -104890195 - MIR SINE MIR -170 92 20 418 319 83 48 chr2 145798015 145798244 -104889610 - MIR SINE MIR -6 256 20 221 130 43 0 chr2 145799112 145799158 -104888696 + (TA)n Simple_repeat Simple_repeat 1 48 0 233 321 57 98 chr2 145799329 145799594 -104888260 + L2 LINE L2 3004 3257 -15 227 319 29 0 chr2 145799636 145799705 -104888149 + L2 LINE L2 3149 3219 -53 289 277 10 40 chr2 145799809 145799910 -104887944 + MLT1F1 LTR MaLR 1 98 -469 3022 42 0 16 chr2 145799927 145800304 -104887550 + L1PA5 LINE L1 5780 6150 -4 210 37 0 0 chr2 145800305 145800332 -104887522 + (TA)n Simple_repeat Simple_repeat 2 28 0 980 241 146 15 chr2 145800591 145800852 -104887002 + MLT1G1 LTR MaLR 301 595 0 186 132 57 0 chr2 145800883 145800936 -104886918 + (TA)n Simple_repeat Simple_repeat 1 56 0 273 306 25 59 chr2 145800936 145801082 -104886772 - MIR SINE MIR -58 204 65 198 0 0 0 chr2 145801082 145801104 -104886750 + (CA)n Simple_repeat Simple_repeat 2 23 0 273 306 25 59 chr2 145801104 145801161 -104886693 - MIR SINE MIR -197 65 8 22 35 0 0 chr2 145801460 145801489 -104886365 + AT_rich Low_complexity Low_complexity 1 29 0 676 179 122 39 chr2 145802397 145802553 -104885301 + MLT1J LTR MaLR 1 169 -342 259 176 0 40 chr2 145802561 145802635 -104885219 + (TAGA)n Simple_repeat Simple_repeat 3 73 0 550 200 25 0 chr2 145802638 145802758 -104885096 + L1MC4 LINE L1 7920 8042 0 669 256 109 38 chr2 145802952 145803190 -104884664 + MIR SINE MIR 7 261 -1 360 259 89 119 chr2 145803803 145804096 -104883758 + MLT1J LTR MaLR 27 310 -201 256 264 0 0 chr2 145806709 145806762 -104881092 - MLT1K LTR MaLR -8 580 528 180 0 0 0 chr2 145807372 145807392 -104880462 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1781 108 24 0 chr2 145807405 145807654 -104880200 - AluSq SINE Alu -58 255 1 466 288 79 34 chr2 145808036 145808963 -104878891 - L1MB5 LINE L1 -192 5982 5006 252 0 0 0 chr2 145808979 145809007 -104878847 + (TG)n Simple_repeat Simple_repeat 1 28 0 333 0 0 0 chr2 145809009 145809046 -104878808 + (GA)n Simple_repeat Simple_repeat 2 38 0 1685 176 37 40 chr2 145809171 145809547 -104878307 + THE1C LTR MaLR 1 375 0 1761 185 0 3 chr2 145809791 145810102 -104877752 - AluSx SINE Alu 0 310 1 243 222 42 14 chr2 145810181 145810253 -104877601 - MLT1K LTR MaLR -12 537 464 569 261 73 21 chr2 145810333 145810671 -104877183 - MLT1H1 LTR MaLR -216 374 32 253 286 13 0 chr2 145811932 145812009 -104875845 - MLT1H1-int LTR MaLR -1286 85 8 706 261 189 55 chr2 145812018 145812477 -104875377 - MLT1H1 LTR MaLR -2 553 33 230 360 40 8 chr2 145813090 145813215 -104874639 + MIR SINE MIR 15 143 -119 1626 197 0 16 chr2 145813221 145813526 -104874328 + AluJo SINE Alu 1 300 -12 450 220 19 135 chr2 145813973 145814232 -104873622 - L1MEd LINE L1 -4886 1233 1005 194 0 39 0 chr2 145814406 145814432 -104873422 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 495 303 74 34 chr2 145814509 145814806 -104873048 + MLT1I LTR MaLR 17 325 -84 2009 136 0 0 chr2 145815442 145815721 -104872133 + AluSx SINE Alu 1 279 -33 342 0 0 0 chr2 145815721 145815759 -104872095 + (CA)n Simple_repeat Simple_repeat 1 38 0 677 11 23 0 chr2 145816100 145816187 -104871667 - L1PA4 LINE L1 -1 6154 6066 519 326 77 55 chr2 145819205 145819299 -104868555 - L2 LINE L2 -1 3312 3222 2899 102 41 5 chr2 145819299 145819741 -104868113 + L1PA13 LINE L1 5702 6159 -4 519 326 77 55 chr2 145819741 145820420 -104867434 - L2 LINE L2 -91 3222 2466 183 204 0 0 chr2 145820849 145820893 -104866961 + (TA)n Simple_repeat Simple_repeat 2 45 0 2409 44 20 3 chr2 145821156 145821449 -104866405 + AluY SINE Alu 1 298 -13 235 250 16 16 chr2 145822599 145822663 -104865191 - L2 LINE L2 0 3313 3250 430 278 58 17 chr2 145822789 145822962 -104864892 + MLT1J LTR MaLR 1 180 -331 703 270 97 45 chr2 145823128 145823417 -104864437 + MLT1J1 LTR MaLR 2 305 -141 26 0 0 0 chr2 145824753 145824779 -104863075 + AT_rich Low_complexity Low_complexity 1 26 0 344 246 26 70 chr2 145825048 145825318 -104862536 + MLT1J1 LTR MaLR 110 408 -38 219 36 0 0 chr2 145826186 145826214 -104861640 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 286 308 45 45 chr2 145826543 145826676 -104861178 - L2 LINE L2 0 3313 3181 658 275 22 44 chr2 145826812 145827041 -104860813 - MIR SINE MIR 0 262 39 316 273 121 23 chr2 145827516 145827648 -104860206 - L2 LINE L2 -1 3312 3168 23 54 0 0 chr2 145827662 145827699 -104860155 + AT_rich Low_complexity Low_complexity 1 37 0 2303 98 0 0 chr2 145828721 145829026 -104858828 + AluSc SINE Alu 1 305 -4 21 36 0 0 chr2 145829196 145829224 -104858630 + AT_rich Low_complexity Low_complexity 1 28 0 381 263 67 38 chr2 145829743 145829952 -104857902 + MER113 DNA MER1_type? 1 215 -306 210 250 0 114 chr2 145831045 145831133 -104856721 - MER5A DNA MER1_type -26 163 86 3147 26 0 18 chr2 145832307 145832690 -104855164 - L1PA4 LINE L1 -4 6151 5776 325 250 83 56 chr2 145833056 145833200 -104854654 + MIR SINE MIR 37 184 -78 379 297 60 69 chr2 145834149 145834641 -104853213 + L1ME LINE L1 888 1369 -5578 271 206 101 0 chr2 145835045 145835132 -104852722 + L1ME LINE L1 1583 1765 -5182 22 56 0 0 chr2 145835132 145835168 -104852686 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr2 145835207 145835242 -104852612 + AT_rich Low_complexity Low_complexity 1 35 0 678 214 38 14 chr2 145835319 145835355 -104852499 + L1MA4 LINE L1 4337 4371 -1775 2534 49 3 0 chr2 145835355 145835662 -104852192 + AluY SINE Alu 1 308 -3 678 214 38 14 chr2 145835662 145835845 -104852009 + L1MA4 LINE L1 4371 4547 -1599 * 6041 152 26 12 chr2 145835828 145837184 -104850670 + L1MA4 LINE L1 4920 6298 -2 416 260 78 49 chr2 145837203 145837575 -104850279 + L1ME LINE L1 1825 2351 -4787 26 0 0 0 chr2 145838146 145838172 -104849682 + AT_rich Low_complexity Low_complexity 1 26 0 435 296 95 6 chr2 145838234 145838403 -104849451 - MIR SINE MIR -15 247 64 761 175 119 12 chr2 145838573 145838733 -104849121 + MER3 DNA MER1_type 8 184 -25 435 340 49 0 chr2 145839204 145839348 -104848506 + MIR3 SINE MIR 37 187 -21 29 47 0 0 chr2 145840776 145840819 -104847035 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 145841646 145841667 -104846187 + AT_rich Low_complexity Low_complexity 1 21 0 282 56 0 0 chr2 145841976 145842012 -104845842 + (TG)n Simple_repeat Simple_repeat 2 37 0 394 340 115 30 chr2 145842494 145842991 -104844863 + L1 LINE L1 4861 5399 -747 1617 163 28 3 chr2 145843329 145843612 -104844242 + L1MC2 LINE L1 5866 6155 -189 2375 62 0 39 chr2 145843642 145843947 -104843907 + AluY SINE Alu 1 293 -18 525 32 0 0 chr2 145843947 145844010 -104843844 + (TA)n Simple_repeat Simple_repeat 1 63 0 1092 170 0 0 chr2 145844017 145844176 -104843678 + FRAM SINE Alu 1 158 -18 1875 158 19 68 chr2 145844181 145844591 -104843263 + MLT1B LTR MaLR 1 390 0 208 343 0 15 chr2 145844775 145844842 -104843012 + L2 LINE L2 2550 2615 -699 279 254 154 18 chr2 145844873 145844983 -104842871 - L2 LINE L2 0 3313 3189 * 301 376 76 26 chr2 145844977 145845365 -104842489 + L2 LINE L2 2632 3035 -237 221 271 17 0 chr2 145846299 145846358 -104841496 + GA-rich Low_complexity Low_complexity 3 62 0 382 287 10 0 chr2 145846714 145846815 -104841039 - LTR33 LTR ERVL -412 109 8 208 254 51 17 chr2 145847380 145847439 -104840415 - MIR SINE MIR -74 188 128 1421 135 20 20 chr2 145847607 145847852 -104840002 + L1MC1 LINE L1 6089 6333 0 680 290 58 53 chr2 145848067 145848484 -104839370 - MLT1H LTR MaLR -130 419 1 513 313 15 10 chr2 145848725 145848923 -104838931 + LTR16C LTR ERVL 255 453 -38 507 279 10 0 chr2 145849119 145849223 -104838631 + MER81 DNA DNA 5 109 -5 1844 331 98 43 chr2 145849335 145850499 -104837355 - L3 LINE CR1 -26 1551 324 574 157 109 54 chr2 145850504 145850640 -104837214 + MER99 DNA DNA 2 145 -683 1523 233 87 7 chr2 145850640 145851037 -104836817 + MLT2B1 LTR ERVL 2 489 -31 186 71 0 0 chr2 145851037 145851065 -104836789 + (TA)n Simple_repeat Simple_repeat 1 28 0 1523 233 87 7 chr2 145851065 145851092 -104836762 + MLT2B1 LTR ERVL 489 512 -8 2368 198 119 22 chr2 145851094 145851716 -104836138 + MER99 DNA DNA 144 825 -3 790 204 0 0 chr2 145851740 145851872 -104835982 + FLAM_A SINE Alu 1 132 -1 233 312 43 11 chr2 145852040 145852133 -104835721 - L2 LINE L2 -27 3245 3150 284 243 90 12 chr2 145854711 145854823 -104833031 - MLT1H LTR MaLR -4 586 437 1187 161 76 5 chr2 145854855 145855079 -104832775 + MER50 LTR ERV1 1 240 -494 * 1756 124 4 8 chr2 145855062 145855328 -104832526 + MER50 LTR ERV1 433 697 -37 2601 236 77 30 chr2 145855349 145856202 -104831652 + MER97a DNA MER1_type? 1 893 -1 649 289 78 40 chr2 145856212 145856505 -104831349 - MLT1H LTR MaLR -212 330 74 278 291 68 26 chr2 145857121 145857238 -104830616 + L2 LINE L2 3192 3313 0 901 216 17 17 chr2 145857945 145858121 -104829733 - MER5A DNA MER1_type -2 187 12 181 225 75 0 chr2 145858868 145858908 -104828946 + L2 LINE L2 3230 3272 0 216 284 211 0 chr2 145859188 145859297 -104828557 + MIR SINE MIR 5 136 -126 814 206 50 20 chr2 145859554 145859753 -104828101 + MER63A DNA MER1_type 3 207 -3 249 281 62 47 chr2 145862448 145862576 -104825278 + MIR SINE MIR 63 192 -70 2063 78 8 0 chr2 145863655 145863910 -104823944 + AluY SINE Alu 40 296 -15 464 270 71 0 chr2 145864121 145864247 -104823607 - MIR3 SINE MIR -3 205 71 41 36 0 0 chr2 145864486 145864541 -104823313 + AT_rich Low_complexity Low_complexity 1 55 0 419 277 36 36 chr2 145865684 145865821 -104822033 - MIR SINE MIR -118 144 8 246 343 0 0 chr2 145866631 145866733 -104821121 + (TG)n Simple_repeat Simple_repeat 2 103 0 252 275 63 35 chr2 145866975 145867117 -104820737 + HAL1b LINE L1 336 481 -867 545 357 66 59 chr2 145867129 145867718 -104820136 + L2 LINE L2 2686 3271 -1 268 221 67 0 chr2 145868008 145868112 -104819742 + L1ME4a LINE L1 6008 6118 -3 717 179 0 0 chr2 145868159 145868271 -104819583 + FLAM_C SINE Alu 7 118 -25 422 281 0 44 chr2 145868354 145868489 -104819365 + MLT1L LTR MaLR 161 289 -326 3695 154 31 0 chr2 145868685 145869301 -104818553 - L1PA16 LINE L1 -9 6157 5523 1042 234 41 0 chr2 145869633 145869851 -104818003 + L1MD1 LINE L1 27 253 -6287 2751 169 70 5 chr2 145869854 145870464 -104817390 + L1MD1 LINE L1 1570 2219 -4321 * 2775 217 22 53 chr2 145870456 145871921 -104815933 + L1MD1 LINE L1 4859 6288 -348 1949 180 3 17 chr2 145871918 145872264 -104815590 + L1PB4 LINE L1 5763 6105 -51 * 2075 144 24 24 chr2 145872264 145872639 -104815215 + THE1C LTR MaLR 1 375 0 1949 180 3 17 chr2 145872639 145872654 -104815200 + L1PB4 LINE L1 6105 6119 -37 1594 186 58 41 chr2 145872663 145873057 -104814797 + L1MD1 LINE L1 5839 6242 0 376 227 0 31 chr2 145873629 145873726 -104814128 + MLT1I LTR MaLR 316 409 0 521 214 32 0 chr2 145873829 145873955 -104813899 - MER103 DNA DNA -30 136 7 717 149 0 0 chr2 145874034 145874141 -104813713 + U6 snRNA snRNA 1 107 0 336 226 43 21 chr2 145874493 145874586 -104813268 + L1ME4a LINE L1 5978 6072 -49 246 62 0 0 chr2 145875002 145875034 -104812820 + (CACCAT)n Simple_repeat Simple_repeat 1 32 0 26180 137 20 11 chr2 145875638 145879419 -104808435 - L1PA8 LINE L1 -4 6483 2736 252 59 0 0 chr2 145879419 145879453 -104808401 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 26180 137 20 11 chr2 145879453 145880828 -104807026 - L1PA8 LINE L1 -3751 2736 1206 225 0 0 0 chr2 145880828 145880853 -104807001 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 26180 137 20 11 chr2 145880853 145881202 -104806652 - L1PA8 LINE L1 -5281 1206 862 186 189 0 0 chr2 145881342 145881379 -104806475 + (TATATG)n Simple_repeat Simple_repeat 6 42 0 2168 288 106 12 chr2 145882610 145883766 -104804088 + L2 LINE L2 2047 3312 -1 235 383 13 67 chr2 145883773 145883922 -104803932 - L2 LINE L2 -88 3184 3044 236 361 62 0 chr2 145884189 145884286 -104803568 - L2 LINE L2 -15 3257 3155 2154 133 33 28 chr2 145885707 145886069 -104801785 - THE1B LTR MaLR 0 364 1 204 271 34 0 chr2 145886968 145887027 -104800827 - MIR SINE MIR -46 216 156 198 0 0 0 chr2 145887033 145887055 -104800799 + (A)n Simple_repeat Simple_repeat 1 22 0 329 115 0 16 chr2 145887190 145887251 -104800603 + (TG)n Simple_repeat Simple_repeat 1 60 0 205 375 106 14 chr2 145887723 145887998 -104799856 + L2 LINE L2 2290 2589 -725 293 322 96 38 chr2 145888023 145888322 -104799532 + L2 LINE L2 2741 3060 -212 2169 138 0 0 chr2 145888478 145888880 -104798974 - AluSq SINE Alu 0 402 1 316 358 31 38 chr2 145890375 145890668 -104797186 - L3 LINE CR1 -354 1223 933 202 348 123 29 chr2 145890908 145891046 -104796808 - L2 LINE L2 -36 3236 3086 648 265 22 49 chr2 145891187 145891372 -104796482 - MIR SINE MIR -59 203 24 1665 251 111 9 chr2 145892240 145892801 -104795053 + L1ME3A LINE L1 5544 6161 -9 453 309 42 12 chr2 145893627 145893795 -104794059 - MIR SINE MIR -8 254 82 423 211 59 72 chr2 145893802 145893954 -104793900 - MER58C DNA MER1_type 0 215 66 212 333 74 0 chr2 145894037 145894091 -104793763 + MIR SINE MIR 21 78 -184 933 243 67 13 chr2 145894095 145894334 -104793520 - MIR SINE MIR -10 252 1 446 253 21 90 chr2 145895247 145895480 -104792374 + L2 LINE L2 3097 3313 0 264 288 7 65 chr2 145896704 145896857 -104790997 + L3 LINE CR1 1103 1246 -331 204 40 0 0 chr2 145898499 145898524 -104789330 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 242 268 207 0 chr2 145898645 145898727 -104789127 + MIR3 SINE MIR 98 196 -12 187 328 33 16 chr2 145898993 145899054 -104788800 + MIR3 SINE MIR 128 189 -19 294 304 10 10 chr2 145899917 145900019 -104787835 - MIR3 SINE MIR -4 204 103 1969 186 6 11 chr2 145900180 145900545 -104787309 - MLT1A1 LTR MaLR -2 363 1 283 318 28 28 chr2 145900677 145900784 -104787070 - MIR3 SINE MIR -9 199 93 183 250 67 33 chr2 145901620 145901680 -104786174 - L3 LINE CR1 -938 639 578 200 288 55 41 chr2 145903184 145903257 -104784597 + MIR SINE MIR 3 76 -186 378 117 143 0 chr2 145903295 145903372 -104784482 - MIR SINE MIR -120 142 55 1405 158 254 9 chr2 145903421 145903763 -104784091 + MSTA LTR MaLR 1 426 -2 433 345 42 0 chr2 145903785 145903953 -104783901 + MIR SINE MIR 88 262 0 653 269 180 57 chr2 145904430 145904747 -104783107 + MLT1L LTR MaLR 44 443 -172 1609 196 17 3 chr2 145904747 145905048 -104782806 + AluJb SINE Alu 1 305 -7 653 269 180 57 chr2 145905048 145905220 -104782634 + MLT1L LTR MaLR 443 593 -22 240 253 0 0 chr2 145906069 145906144 -104781710 + (CATA)n Simple_repeat Simple_repeat 2 76 0 531 0 0 0 chr2 145906169 145906228 -104781626 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 258 306 52 60 chr2 145907096 145907230 -104780624 - L2 LINE L2 -3 3269 3137 297 278 27 86 chr2 145907322 145907561 -104780293 + MIR SINE MIR 6 230 -32 231 305 127 15 chr2 145909997 145910175 -104777679 + MIR SINE MIR 5 201 -7 3394 118 54 4 chr2 145910447 145911000 -104776854 + MER39B LTR ERV1 6 586 -67 2217 90 3 45 chr2 145911324 145911634 -104776220 - AluSq SINE Alu -16 297 1 2102 127 5 30 chr2 145911908 145912397 -104775457 - MER51A LTR ERV1 0 634 1 727 231 22 70 chr2 145912434 145912663 -104775191 + MLT1I LTR MaLR 192 409 0 25 65 0 0 chr2 145913996 145914042 -104773812 + AT_rich Low_complexity Low_complexity 1 46 0 24 32 0 0 chr2 145914456 145914487 -104773367 + AT_rich Low_complexity Low_complexity 1 31 0 585 0 0 0 chr2 145918268 145918333 -104769521 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 183 218 0 0 chr2 145919294 145919349 -104768505 + GA-rich Low_complexity Low_complexity 2 56 0 289 255 47 38 chr2 145920066 145920172 -104767682 + MER5A DNA MER1_type 81 187 -2 212 288 17 0 chr2 145920914 145920973 -104766881 - L2 LINE L2 -6 3266 3207 * 905 244 13 27 chr2 145920942 145921167 -104766687 - MIR SINE MIR -29 233 12 245 342 51 0 chr2 145921503 145921582 -104766272 + L2 LINE L2 3156 3238 -34 1135 251 126 11 chr2 145921977 145922351 -104765503 + MLT1G1 LTR MaLR 4 420 -175 509 227 60 32 chr2 145922321 145922506 -104765348 + MLT1F LTR MaLR 353 542 0 * 27 0 0 0 chr2 145923265 145923292 -104764562 + AT_rich Low_complexity Low_complexity 1 27 0 510 287 82 0 chr2 145923818 145924013 -104763841 + LTR33 LTR ERVL 5 215 -306 402 173 0 25 chr2 145924161 145924242 -104763612 + LTR33 LTR ERVL 443 521 0 518 286 5 20 chr2 145924418 145924621 -104763233 - L1ME4a LINE L1 -193 5928 5729 26 50 0 0 chr2 145924705 145924745 -104763109 + AT_rich Low_complexity Low_complexity 1 40 0 238 274 98 20 chr2 145925169 145925271 -104762583 - MIR SINE MIR -60 202 93 188 304 36 0 chr2 145925695 145925751 -104762103 - MIR3 SINE MIR -9 199 142 368 283 207 14 chr2 145931161 145931306 -104756548 + MIR SINE MIR 2 174 -88 875 155 13 26 chr2 145931307 145931462 -104756392 - FRAM SINE Alu -12 164 12 600 186 0 0 chr2 145931899 145932017 -104755837 + L1MD1 LINE L1 6114 6231 -11 258 337 11 21 chr2 145932057 145932152 -104755702 - MIR3 SINE MIR -4 204 111 593 75 0 0 chr2 145932324 145932404 -104755450 - MADE1 DNA Mariner 0 80 1 379 134 0 15 chr2 145932469 145932536 -104755318 - MLT1C LTR MaLR 0 467 402 1866 169 3 10 chr2 145932536 145932918 -104754936 + AluJb SINE Alu 1 380 0 1264 172 90 81 chr2 145932918 145933329 -104754525 - MLT1C LTR MaLR -56 408 1 219 171 26 66 chr2 145933644 145933720 -104754134 - L2 LINE L2 -74 3239 3167 186 213 115 66 chr2 145933764 145933825 -104754029 + L2 LINE L2 3203 3266 -6 22 0 0 0 chr2 145933861 145933883 -104753971 + AT_rich Low_complexity Low_complexity 1 22 0 696 282 61 5 chr2 145933899 145934112 -104753742 - MIR SINE MIR -31 231 7 275 316 60 8 chr2 145934868 145934985 -104752869 - MIR SINE MIR -70 138 16 22 0 0 0 chr2 145936488 145936510 -104751344 + AT_rich Low_complexity Low_complexity 1 22 0 603 276 183 32 chr2 145936693 145937225 -104750629 - L2 LINE L2 -4 3309 2694 192 417 43 24 chr2 145937331 145937585 -104750269 + L2 LINE L2 2571 2829 -485 711 110 18 0 chr2 145937827 145937936 -104749918 - HY1 scRNA scRNA -1 111 1 430 394 6 0 chr2 145938100 145938265 -104749589 - MIR3 SINE MIR -6 202 37 216 0 0 0 chr2 145938374 145938398 -104749456 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 181 368 45 23 chr2 145939321 145939454 -104748400 - MIR SINE MIR -25 237 102 437 322 6 60 chr2 145939516 145939699 -104748155 + MIR SINE MIR 20 192 -70 635 323 211 43 chr2 145940597 145941367 -104746487 + L2 LINE L2 1468 2108 -1205 2248 119 40 8 chr2 145941367 145941720 -104746134 - THE1B LTR MaLR 0 364 1 635 323 211 43 chr2 145941720 145942000 -104745854 + L2 LINE L2 2108 2340 -973 981 177 0 0 chr2 145942000 145942158 -104745696 - FAM SINE Alu -13 162 5 635 323 211 43 chr2 145942158 145942679 -104745175 + L2 LINE L2 2340 3313 0 5197 111 24 17 chr2 145943000 145943862 -104743992 - Tigger3(Golem) DNA MER2_type 0 3029 2162 2049 111 3 28 chr2 145944105 145944426 -104743428 - AluSx SINE Alu 0 314 1 22 0 0 0 chr2 145944469 145944491 -104743363 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr2 145944581 145944615 -104743239 + AT_rich Low_complexity Low_complexity 1 34 0 989 256 18 0 chr2 145946073 145946292 -104741562 - MER58A DNA MER1_type 0 224 2 250 326 177 27 chr2 145947403 145947961 -104739893 - L2 LINE L2 -900 2414 1773 466 327 26 6 chr2 145950216 145950372 -104737482 + MIR SINE MIR 67 225 -37 468 306 52 43 chr2 145950404 145950849 -104737005 + L1ME LINE L1 5311 5759 -362 196 284 75 0 chr2 145951268 145951335 -104736519 - MIR SINE MIR -46 216 145 183 357 0 0 chr2 145951859 145951915 -104735939 + L2 LINE L2 3217 3272 0 1761 195 0 16 chr2 145952449 145952762 -104735092 - AluJb SINE Alu -4 308 1 209 259 17 0 chr2 145953954 145954012 -104733842 + CT-rich Low_complexity Low_complexity 2 60 0 375 169 0 0 chr2 145954676 145954747 -104733107 + (TGAA)n Simple_repeat Simple_repeat 3 73 0 540 159 80 0 chr2 145954876 145954989 -104732865 + L1MB7 LINE L1 6054 6175 -9 231 211 0 0 chr2 145957812 145957850 -104730004 - L2 LINE L2 -12 3301 3264 * 406 328 151 5 chr2 145957817 145958009 -104729845 - MIR SINE MIR -11 251 32 13006 119 39 84 chr2 145959074 145961271 -104726583 + Tigger1 DNA MER2_type 2 2072 -346 2280 108 0 0 chr2 145961271 145961568 -104726286 + AluSx SINE Alu 1 297 -15 13006 119 39 84 chr2 145961568 145961901 -104725953 + Tigger1 DNA MER2_type 2072 2418 0 325 333 26 0 chr2 145964240 145964357 -104723497 - MIR3 SINE MIR -50 158 39 2202 124 3 3 chr2 145964515 145964821 -104723033 + AluSq SINE Alu 5 310 -3 348 313 147 6 chr2 145967269 145967432 -104720422 - MER5A DNA MER1_type 0 189 4 202 330 48 29 chr2 145967615 145967718 -104720136 - L2 LINE L2 -10 3303 3199 189 307 98 59 chr2 145967878 145968031 -104719823 + L2 LINE L2 2151 2309 -1005 518 300 100 67 chr2 145968446 145968776 -104719078 + L2 LINE L2 2932 3272 0 333 0 0 0 chr2 145969855 145969892 -104717962 + (TC)n Simple_repeat Simple_repeat 2 38 0 300 246 70 0 chr2 145971310 145971424 -104716430 - L1ME4a LINE L1 -2 6119 5998 1063 156 14 0 chr2 145972189 145972422 -104715432 + L1MA8 LINE L1 5227 5462 -743 5478 94 131 83 chr2 145972422 145973909 -104713945 + pTR5 LTR ERV1 743 2438 0 2841 171 16 14 chr2 145973912 145974475 -104713379 + L1MA8 LINE L1 5459 6022 -269 23 0 0 0 chr2 145974603 145974626 -104713228 + AT_rich Low_complexity Low_complexity 1 23 0 1861 138 6 44 chr2 145974630 145974949 -104712905 - AluSx SINE Alu -5 307 1 473 288 93 15 chr2 145975280 145975485 -104712369 - LTR67 LTR ERVL -12 545 325 885 198 126 0 chr2 145975570 145975737 -104712117 + MER5A DNA MER1_type 2 189 0 365 236 279 0 chr2 145975857 145975997 -104711857 - MER5A DNA MER1_type 0 189 11 624 294 84 15 chr2 145976376 145976719 -104711135 + ERVL LTR ERVL 4187 4553 -1211 587 324 53 7 chr2 145976779 145977060 -104710794 + ERVL LTR ERVL 5048 5341 -313 1552 166 129 69 chr2 145977080 145977484 -104710370 + MSTA LTR MaLR 1 428 0 359 358 57 0 chr2 145977683 145977876 -104709978 + LTR33 LTR ERVL 5 208 -313 418 263 40 23 chr2 145977971 145978146 -104709708 + LTR33 LTR ERVL 334 511 -10 302 219 62 31 chr2 145979226 145979322 -104708532 - L2 LINE L2 -6 3307 3209 522 220 0 0 chr2 145979693 145979793 -104708061 - Tigger7 DNA MER2_type -1 2490 2391 1357 268 52 12 chr2 145979833 145980236 -104707618 + MLT1F1 LTR MaLR 47 465 -102 181 250 19 39 chr2 145980463 145980515 -104707339 + L2 LINE L2 2430 2480 -834 21 71 0 0 chr2 145981084 145981126 -104706728 + AT_rich Low_complexity Low_complexity 1 42 0 480 250 149 16 chr2 145981177 145981365 -104706489 + MIR SINE MIR 50 262 0 922 221 28 24 chr2 145983744 145983957 -104703897 + L1M3f LINE L1 2 215 -5113 2025 157 3 50 chr2 145983957 145984339 -104703515 + THE1B LTR MaLR 1 364 0 10920 91 16 5 chr2 145984339 145985896 -104701958 + THE1B-int LTR MaLR 1 1575 -5 2151 134 11 53 chr2 145985899 145986279 -104701575 + THE1B LTR MaLR 1 364 0 8691 201 28 32 chr2 145986279 145990249 -104697605 + L1M3f LINE L1 211 4152 -2186 320 125 16 0 chr2 145990249 145990308 -104697546 + L1PA16 LINE L1 6100 6164 -2 8691 201 28 32 chr2 145990308 145991712 -104696142 + L1M3f LINE L1 4152 5560 -778 236 186 0 0 chr2 145991704 145991747 -104696107 - L1MA4 LINE L1 -324 5976 5934 * 399 160 43 0 chr2 145991776 145991870 -104695984 + L1MB4 LINE L1 6083 6180 0 289 306 41 0 chr2 145991995 145992093 -104695761 - MIR SINE MIR -125 137 36 754 210 7 14 chr2 145992104 145992242 -104695612 - MER5A DNA MER1_type -6 183 47 2226 157 56 47 chr2 145992458 145992886 -104694968 - MSTB1 LTR MaLR 0 432 1 2008 107 4 11 chr2 145993024 145993305 -104694549 - AluSc SINE Alu -30 279 1 360 210 0 25 chr2 145993535 145993616 -104694238 + MER103 DNA DNA 46 124 -42 181 296 56 0 chr2 145994609 145994680 -104693174 - MIR SINE MIR -16 246 172 22 0 0 0 chr2 145995563 145995585 -104692269 + AT_rich Low_complexity Low_complexity 1 22 0 224 170 19 0 chr2 145996169 145996222 -104691632 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 186 309 24 60 chr2 145998621 145998705 -104689149 - MIR SINE MIR -43 219 139 314 293 21 37 chr2 145998781 145998972 -104688882 - MER5A DNA MER1_type -1 188 1 1898 112 11 11 chr2 145999045 145999322 -104688532 - AluSc SINE Alu -32 277 1 312 236 14 28 chr2 146001456 146001528 -104686326 + Charlie8 DNA MER1_type 1344 1414 -1003 430 289 44 9 chr2 146001960 146002074 -104685780 - MER5B DNA MER1_type -60 118 1 251 299 0 13 chr2 146002692 146002769 -104685085 + CT-rich Low_complexity Low_complexity 1 76 0 539 338 25 0 chr2 146002909 146003069 -104684785 + MIR SINE MIR 32 195 -67 326 315 210 0 chr2 146003964 146004145 -104683709 + MIR SINE MIR 22 240 -22 193 343 36 64 chr2 146004202 146004342 -104683512 - MIR SINE MIR -98 164 29 188 337 32 21 chr2 146005379 146005474 -104682380 + MIR SINE MIR 97 192 -70 216 301 147 22 chr2 146005648 146005784 -104682070 + MIR SINE MIR 104 256 -6 210 338 64 25 chr2 146005850 146006007 -104681847 + L2 LINE L2 3151 3313 0 2292 57 80 0 chr2 146006552 146006852 -104681002 - L1PA5 LINE L1 -260 5894 5571 1863 61 20 4 chr2 146006852 146007083 -104680771 + L1PA5 LINE L1 5905 6154 0 758 271 199 34 chr2 146007404 146007902 -104679952 - MLT1G LTR MaLR 0 590 11 2501 64 0 0 chr2 146008760 146009058 -104678796 + AluY SINE Alu 1 298 -13 479 260 130 24 chr2 146009265 146009498 -104678356 - MIR SINE MIR -4 258 3 22 0 0 0 chr2 146010251 146010273 -104677581 + AT_rich Low_complexity Low_complexity 1 22 0 948 187 43 5 chr2 146011153 146011340 -104676514 + MER3 DNA MER1_type 5 198 -11 188 363 90 14 chr2 146011355 146011538 -104676316 + L2 LINE L2 2600 2798 -516 209 233 0 0 chr2 146011538 146011581 -104676273 + MER5B DNA MER1_type 1 43 -135 180 273 0 0 chr2 146011589 146011633 -104676221 - MER5A DNA MER1_type -78 111 68 572 317 63 65 chr2 146011644 146012374 -104675480 + L2 LINE L2 2524 3248 -65 774 278 11 0 chr2 146012427 146012614 -104675240 + MER5A DNA MER1_type 1 189 0 320 87 0 0 chr2 146012637 146012683 -104675171 - Alu SINE Alu -3 299 254 4906 271 81 47 chr2 146012940 146017094 -104670760 + L1ME2 LINE L1 1162 5672 -1269 2744 243 98 2 chr2 146017093 146017924 -104669930 + L1ME2 LINE L1 6049 6958 -1 * 357 109 0 0 chr2 146018279 146018334 -104669520 + (TG)n Simple_repeat Simple_repeat 2 56 0 184 241 0 74 chr2 146019464 146019518 -104668336 - MIR SINE MIR -116 146 97 29 47 0 0 chr2 146019708 146019751 -104668103 + AT_rich Low_complexity Low_complexity 1 43 0 23 33 0 0 chr2 146020662 146020692 -104667162 + AT_rich Low_complexity Low_complexity 1 30 0 185 0 40 0 chr2 146020748 146020773 -104667081 + (TTA)n Simple_repeat Simple_repeat 3 28 0 1985 49 0 0 chr2 146020773 146021017 -104666837 - L1PA5 LINE L1 -18 6136 5893 245 222 0 25 chr2 146021117 146021198 -104666656 + (TTTAA)n Simple_repeat Simple_repeat 3 81 0 679 241 82 16 chr2 146023163 146023408 -104664446 + ORSL DNA AcHobo 15 275 0 3007 179 18 69 chr2 146024423 146025151 -104662703 - LTR8 LTR ERV1 0 691 1 866 240 63 33 chr2 146025155 146025426 -104662428 - LTR33 LTR ERVL -241 280 2 3246 152 35 70 chr2 146025822 146026538 -104661316 + LTR8 LTR ERV1 1 691 0 511 309 57 19 chr2 146026551 146026761 -104661093 + LTR33 LTR ERVL 304 521 0 183 80 0 0 chr2 146026918 146026943 -104660911 + (ATGGTG)n Simple_repeat Simple_repeat 6 30 0 280 105 0 0 chr2 146027043 146027081 -104660773 - MLT2B2 LTR ERVL 0 515 478 25 90 0 0 chr2 146027081 146027148 -104660706 + AT_rich Low_complexity Low_complexity 1 67 0 40 21 0 0 chr2 146027564 146027611 -104660243 + AT_rich Low_complexity Low_complexity 1 47 0 1071 192 175 3 chr2 146028110 146028401 -104659453 + MER58B DNA MER1_type 1 341 0 2413 103 0 0 chr2 146028788 146029099 -104658755 + AluSx SINE Alu 1 311 -1 3119 233 50 25 chr2 146029206 146029974 -104657880 - MER21B LTR ERV1 -58 805 19 385 214 14 0 chr2 146029991 146030061 -104657793 - MER21B LTR ERV1 -781 82 12 2100 159 88 20 chr2 146030632 146031029 -104656825 - MSTC LTR MaLR -4 424 1 2399 199 32 60 chr2 146031900 146032528 -104655326 - LTR9 LTR ERV1 0 612 3 3995 100 5 0 chr2 146032586 146033137 -104654717 + MER41A LTR ERV1 1 554 0 5208 132 62 41 chr2 146033137 146034170 -104653684 + MER41A-int LTR ERV1 1 1011 -6805 2339 82 0 16 chr2 146034170 146034486 -104653368 - AluY SINE Alu 0 311 1 5208 132 62 41 chr2 146034486 146035100 -104652754 + MER41A-int LTR ERV1 1011 3759 -4057 3174 131 34 25 chr2 146035086 146035699 -104652155 + MER41A-int LTR ERV1 2855 3473 -1542 * 9298 89 26 10 chr2 146035696 146037027 -104650827 + MER41A-int LTR ERV1 4590 5942 -4 3921 92 20 0 chr2 146037029 146037572 -104650282 + MER41A LTR ERV1 1 554 0 199 291 174 12 chr2 146038046 146038132 -104649722 + MIR SINE MIR 38 137 -71 1799 219 67 10 chr2 146038140 146038576 -104649278 - MLT1C LTR MaLR 0 593 1 207 305 21 32 chr2 146038576 146038671 -104649183 + MIR SINE MIR 143 236 -26 183 320 100 53 chr2 146039385 146039535 -104648319 + L2 LINE L2 2890 3046 -226 257 217 0 0 chr2 146039738 146039798 -104648056 + CT-rich Low_complexity Low_complexity 2 61 0 289 179 39 115 chr2 146039929 146040007 -104647847 - L2 LINE L2 0 3272 3201 715 309 28 14 chr2 146040190 146040478 -104647376 + L2 LINE L2 1803 2094 -1220 1481 272 125 13 chr2 146040482 146040946 -104646908 + MER69 DNA AcHobo 1 516 -2010 927 257 97 3 chr2 146040947 146041278 -104646576 + MER69 DNA AcHobo 2165 2526 0 453 235 57 38 chr2 146042635 146043002 -104644852 - L1P5 LINE L1 -676 5478 5101 1527 155 161 42 chr2 146043005 146043028 -104644826 + MSTA LTR MaLR 4 23 -405 1855 139 52 33 chr2 146043028 146043396 -104644458 - THE1C LTR MaLR 0 375 1 1527 155 161 42 chr2 146043396 146043752 -104644102 + MSTA LTR MaLR 23 428 0 3154 142 14 11 chr2 146043752 146044345 -104643509 + MSTA-int LTR MaLR 2 554 -1026 536 306 48 4 chr2 146044502 146044754 -104643100 + MLT2B1 LTR ERVL 249 511 -9 185 206 41 151 chr2 146044767 146044840 -104643014 + MIR SINE MIR 35 99 -109 22 0 0 0 chr2 146044996 146045018 -104642836 + AT_rich Low_complexity Low_complexity 1 22 0 256 192 0 0 chr2 146045122 146045174 -104642680 - MLT1K LTR MaLR 0 588 537 21 0 0 0 chr2 146045175 146045196 -104642658 + AT_rich Low_complexity Low_complexity 1 21 0 540 56 0 0 chr2 146045267 146045339 -104642515 + (TC)n Simple_repeat Simple_repeat 2 73 0 274 308 0 33 chr2 146045345 146045436 -104642418 - MLT1K LTR MaLR -189 399 312 1132 116 21 5 chr2 146045682 146045872 -104641982 + AluSg/x SINE Alu 110 302 -10 21 0 0 0 chr2 146046638 146046659 -104641195 + AT_rich Low_complexity Low_complexity 1 21 0 330 182 306 12 chr2 146046659 146046829 -104641025 + Charlie1b DNA MER1_type 2 221 -302 1753 142 18 4 chr2 146046977 146047258 -104640596 + AluSx SINE Alu 11 295 -17 1473 203 119 55 chr2 146048684 146049126 -104638728 + MLT2B1 LTR ERVL 1 478 -42 339 44 0 0 chr2 146049126 146049171 -104638683 + (CA)n Simple_repeat Simple_repeat 2 46 0 1473 203 119 55 chr2 146049171 146049217 -104638637 + MLT2B1 LTR ERVL 478 520 0 231 264 94 25 chr2 146050124 146050283 -104637571 + L1ME4a LINE L1 5613 5782 -339 249 206 50 131 chr2 146050439 146050599 -104637255 + L1ME4a LINE L1 5881 6027 -94 22 0 0 0 chr2 146050682 146050704 -104637150 + AT_rich Low_complexity Low_complexity 1 22 0 789 234 29 0 chr2 146050966 146051141 -104636713 - MER5A DNA MER1_type 0 189 10 212 338 14 0 chr2 146051190 146051264 -104636590 - L2 LINE L2 -5 3267 3193 461 95 0 27 chr2 146051306 146051380 -104636474 - MADE1 DNA Mariner -6 74 3 186 289 58 0 chr2 146051664 146051716 -104636138 + MIR3 SINE MIR 111 165 -43 384 336 103 54 chr2 146051895 146052323 -104635531 + L2 LINE L2 2824 3272 0 312 254 45 45 chr2 146052491 146052541 -104635313 - MIR3 SINE MIR -17 191 142 2049 145 58 3 chr2 146052541 146052886 -104634968 + THE1B LTR MaLR 1 364 0 11483 100 8 7 chr2 146052886 146054464 -104633390 + THE1B-int LTR MaLR 1 1580 0 2039 128 60 28 chr2 146054464 146054817 -104633037 + THE1B LTR MaLR 1 364 0 312 254 45 45 chr2 146054817 146054874 -104632980 - MIR3 SINE MIR -63 145 82 254 330 9 9 chr2 146056062 146056177 -104631677 - MER102a DNA MER1_type -1 329 215 212 254 0 17 chr2 146056427 146056486 -104631368 + (CTTTA)n Simple_repeat Simple_repeat 5 62 0 245 229 49 25 chr2 146056524 146056646 -104631208 + (TA)n Simple_repeat Simple_repeat 2 126 0 210 71 0 0 chr2 146057529 146057557 -104630297 + (TG)n Simple_repeat Simple_repeat 2 29 0 22 0 0 0 chr2 146057650 146057672 -104630182 + AT_rich Low_complexity Low_complexity 1 22 0 370 268 45 13 chr2 146058341 146058498 -104629356 - MER103 DNA DNA -2 164 3 1698 287 85 30 chr2 146058598 146059326 -104628528 + L2 LINE L2 1253 2020 -1294 984 274 94 21 chr2 146059343 146059716 -104628138 - LTR40a LTR ERVL -118 401 2 515 260 227 33 chr2 146059721 146060021 -104627833 + L2 LINE L2 2952 3309 -4 21 0 0 0 chr2 146060601 146060622 -104627232 + AT_rich Low_complexity Low_complexity 1 21 0 180 143 0 0 chr2 146062479 146062521 -104625333 + (T)n Simple_repeat Simple_repeat 1 42 0 429 280 87 19 chr2 146062833 146063040 -104624814 - MLT1K LTR MaLR -55 533 313 732 266 30 15 chr2 146063086 146063285 -104624569 + MIR SINE MIR 15 216 -46 310 349 20 20 chr2 146063302 146063448 -104624406 - MLT1K LTR MaLR -370 218 73 688 247 11 0 chr2 146065277 146065455 -104622399 + L1MB7 LINE L1 16 195 -6347 10382 242 50 43 chr2 146065477 146071083 -104616771 - L1MB2 LINE L1 -7 6400 777 323 274 46 57 chr2 146071227 146071401 -104616453 - L1M3de LINE L1 -5220 671 236 28464 121 19 44 chr2 146071484 146077794 -104610060 - L1PA7 LINE L1 -3 6151 9 352 260 10 104 chr2 146077796 146077988 -104609866 - L1M3de LINE L1 -5709 182 9 3410 239 32 56 chr2 146078002 146078881 -104608973 + L1MB7 LINE L1 186 1028 -5514 1442 199 81 12 chr2 146078881 146079202 -104608652 + MER61A LTR ERV1 1 343 0 3410 239 32 56 chr2 146079202 146079556 -104608298 + L1MB7 LINE L1 1028 1389 -5153 1464 260 51 39 chr2 146079550 146079885 -104607969 + L1MB7 LINE L1 1590 1920 -4724 * 2214 110 0 23 chr2 146079885 146080193 -104607661 + AluSc SINE Alu 1 301 -8 1464 260 51 39 chr2 146080193 146081261 -104606593 + L1MB7 LINE L1 1920 3091 -3553 2779 209 102 0 chr2 146081263 146081990 -104605864 + L1MB7 LINE L1 5882 6682 0 310 236 39 4 chr2 146083000 146083240 -104604614 + (TA)n Simple_repeat Simple_repeat 1 248 0 240 35 0 0 chr2 146084089 146084118 -104603736 + (CAT)n Simple_repeat Simple_repeat 2 30 0 205 361 68 75 chr2 146084206 146084339 -104603515 - MIR SINE MIR -113 149 18 210 301 55 14 chr2 146084645 146084718 -104603136 - MIR3 SINE MIR -3 205 130 185 291 22 174 chr2 146084742 146084972 -104602882 + L2 LINE L2 3029 3223 -49 33 0 0 0 chr2 146085235 146085268 -104602586 + AT_rich Low_complexity Low_complexity 1 33 0 377 367 57 6 chr2 146086494 146086652 -104601202 + L2 LINE L2 3107 3272 0 577 297 87 22 chr2 146087790 146088019 -104599835 + MIR SINE MIR 6 249 -13 305 264 7 161 chr2 146088672 146088827 -104599027 + MIR SINE MIR 4 134 -128 55 0 0 0 chr2 146088861 146088916 -104598938 + AT_rich Low_complexity Low_complexity 1 55 0 290 187 173 0 chr2 146088925 146089000 -104598854 + MIR SINE MIR 175 262 0 1797 197 31 3 chr2 146089698 146090025 -104597829 - MLT1A1 LTR MaLR 0 365 26 261 0 0 0 chr2 146090025 146090054 -104597800 + (TA)n Simple_repeat Simple_repeat 2 30 0 1797 197 31 3 chr2 146090054 146090081 -104597773 - MLT1A1 LTR MaLR -339 26 1 2429 270 55 54 chr2 146090322 146090486 -104597368 - L2 LINE L2 -593 2721 2559 2391 81 7 13 chr2 146090486 146090795 -104597059 + AluY SINE Alu 1 307 -4 2429 270 55 54 chr2 146090795 146091545 -104596309 - L2 LINE L2 -755 2559 1806 2103 186 3 3 chr2 146092169 146092535 -104595319 - MER47A DNA MER2_type 0 366 1 294 234 69 41 chr2 146093354 146093499 -104594355 - L1MC/D LINE L1 -2011 5797 5649 491 267 7 14 chr2 146094101 146094247 -104593607 + L1M2 LINE L1 371 515 -6694 1886 299 84 33 chr2 146094347 146095353 -104592501 + L1MA4 LINE L1 138 1553 -5656 5177 214 22 19 chr2 146095374 146096665 -104591189 + L1MA4 LINE L1 3574 4869 -2339 7081 179 38 12 chr2 146096665 146098048 -104589806 - Ricksha DNA DNA -6 3240 1821 1425 195 18 4 chr2 146098046 146098323 -104589531 - Ricksha DNA DNA -2957 289 9 * 7219 169 47 19 chr2 146098332 146100774 -104587080 + L1MA4 LINE L1 4856 7356 -6 621 316 43 56 chr2 146101689 146102081 -104585773 + MLT1J LTR MaLR 102 488 -23 1668 188 8 66 chr2 146102646 146103024 -104584830 - MER52A LTR ERV1 -179 1576 1221 257 50 0 25 chr2 146103024 146103064 -104584790 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 43725 40 2 6 chr2 146103064 146109218 -104578636 - L1PA4 LINE L1 -24 6131 3 3091 206 189 20 chr2 146109220 146110221 -104577633 - MER52A LTR ERV1 -523 1232 1 35 0 0 0 chr2 146111625 146111660 -104576194 + AT_rich Low_complexity Low_complexity 1 35 0 424 329 68 18 chr2 146111874 146112093 -104575761 + L1MEd LINE L1 955 1184 -4935 6860 58 16 1 chr2 146112109 146113333 -104574521 + L1PA7 LINE L1 4916 6152 -2 236 266 65 65 chr2 146113387 146113516 -104574338 + HAL1 LINE L1 1407 1538 -969 2532 66 0 22 chr2 146113516 146113834 -104574020 + AluY SINE Alu 1 311 0 236 266 65 65 chr2 146113834 146113888 -104573966 + HAL1 LINE L1 1537 1590 -917 517 321 38 11 chr2 146114342 146114607 -104573247 + L1M4 LINE L1 4163 4434 -1712 3410 248 89 78 chr2 146114793 146115872 -104571982 - L1MD3 LINE L1 -21 7974 6867 1569 99 29 0 chr2 146115872 146116115 -104571739 - L1MA2 LINE L1 0 6304 6055 3410 248 89 78 chr2 146116115 146116774 -104571080 - L1MD3 LINE L1 -1128 6867 6217 3877 203 19 15 chr2 146116828 146118141 -104569713 + L1MA9 LINE L1 4483 5793 -519 192 212 44 0 chr2 146118158 146118295 -104569559 + (TA)n Simple_repeat Simple_repeat 2 144 0 1393 208 12 30 chr2 146118301 146118633 -104569221 + L1MA9 LINE L1 5782 6107 -205 525 224 52 0 chr2 146118700 146118834 -104569020 + L1MA9 LINE L1 6133 6273 -39 1615 245 125 21 chr2 146118858 146119533 -104568321 - L1MD3 LINE L1 -206 6138 5325 4949 97 23 7 chr2 146119533 146120277 -104567577 - L1PA13 LINE L1 -2 6161 5406 1615 245 125 21 chr2 146120277 146120593 -104567261 - L1MD3 LINE L1 -1019 5325 5043 267 233 78 11 chr2 146120929 146121019 -104566835 - L1MCc LINE L1 -6278 145 50 242 321 8 11 chr2 146121209 146121332 -104566522 + L1M3 LINE L1 4749 4873 -1273 329 344 42 48 chr2 146121360 146121691 -104566163 + L1M3 LINE L1 4903 5231 -915 269 276 82 73 chr2 146121736 146121969 -104565885 + L1M3 LINE L1 5310 5547 -578 1844 125 15 160 chr2 146122275 146122731 -104565123 + MLT1B LTR MaLR 1 390 0 364 315 40 96 chr2 146123028 146123383 -104564471 + L1MC4a LINE L1 5613 5940 -181 2774 10 0 0 chr2 146123383 146123687 -104564167 - AluYa5 SINE Alu -7 304 1 364 315 40 96 chr2 146123687 146123801 -104564053 + L1MC4a LINE L1 5940 6059 -62 230 283 0 0 chr2 146123853 146123913 -104563941 + MIR SINE MIR 203 262 0 284 286 137 51 chr2 146124623 146124878 -104562976 + L2 LINE L2 1656 1932 -1382 506 98 0 24 chr2 146125469 146125551 -104562303 + MADE1 DNA Mariner 1 80 0 375 21 0 0 chr2 146125607 146125654 -104562200 + MADE1 DNA Mariner 34 80 0 927 17 0 17 chr2 146127600 146127717 -104560137 - L1PA4 LINE L1 0 6155 6041 2024 176 2 23 chr2 146128833 146129231 -104558623 - MLT1B LTR MaLR 0 390 1 199 311 0 0 chr2 146130249 146130294 -104557560 + L3b LINE CR1 1291 1335 -248 593 306 103 9 chr2 146130518 146130750 -104557104 - MIR SINE MIR 0 262 9 2220 217 2 6 chr2 146132102 146132604 -104555250 - L1 LINE L1 -1743 4403 3904 * 3113 207 14 6 chr2 146132602 146133306 -104554548 + L1 LINE L1 4378 5087 -1059 1796 151 164 11 chr2 146133324 146133695 -104554159 - MSTA LTR MaLR 0 428 1 9535 138 7 35 chr2 146133695 146135319 -104552535 - MSTA-int LTR MaLR 0 1580 3 1694 152 160 42 chr2 146135320 146135676 -104552178 - MSTA LTR MaLR 0 428 23 1856 136 52 33 chr2 146135676 146136044 -104551810 + THE1C LTR MaLR 1 375 0 1694 152 160 42 chr2 146136044 146136069 -104551785 - MSTA LTR MaLR -405 23 2 1446 167 8 10 chr2 146136069 146136500 -104551354 + L1P5 LINE L1 5099 5528 -623 182 235 29 103 chr2 146136866 146136934 -104550920 + L2 LINE L2 3210 3272 0 30 27 0 0 chr2 146138521 146138558 -104549296 + AT_rich Low_complexity Low_complexity 1 37 0 677 268 134 36 chr2 146138618 146139104 -104548750 + MLT1G3 LTR MaLR 1 593 -2 395 274 0 28 chr2 146139319 146139425 -104548429 + MLT1G LTR MaLR 112 214 -376 658 262 25 75 chr2 146139436 146139715 -104548139 + MLT1-int LTR MaLR 337 601 -770 537 135 0 0 chr2 146140391 146140480 -104547374 + (T)n Simple_repeat Simple_repeat 1 89 0 674 306 99 42 chr2 146140720 146141182 -104546672 + MLT1G3 LTR MaLR 90 540 -2 252 170 38 38 chr2 146142160 146142213 -104545641 + MER58 DNA MER1_type 2368 2420 0 8397 245 43 27 chr2 146142215 146146025 -104541829 + L1ME1 LINE L1 2284 6306 -28 340 301 29 0 chr2 146146045 146146181 -104541673 + L1ME3 LINE L1 5161 5300 -846 7785 16 2 0 chr2 146146222 146147121 -104540733 - L1PA3 LINE L1 -1 6154 5254 1445 260 47 0 chr2 146147131 146147560 -104540294 + L1ME3 LINE L1 5320 5770 -396 2048 168 65 32 chr2 146147680 146148092 -104539762 - MSTB LTR MaLR 0 426 1 236 237 31 41 chr2 146148168 146148265 -104539589 + L1ME3 LINE L1 6067 6162 0 211 214 0 0 chr2 146148317 146148359 -104539495 + (CATA)n Simple_repeat Simple_repeat 3 44 0 517 299 79 28 chr2 146150395 146150609 -104537245 + MIR SINE MIR 22 246 -16 213 235 0 0 chr2 146151882 146151933 -104535921 + T-rich Low_complexity Low_complexity 1 51 0 262 269 121 10 chr2 146152590 146152713 -104535141 - MIR SINE MIR -54 154 16 21 82 0 0 chr2 146152766 146152815 -104535039 + AT_rich Low_complexity Low_complexity 1 49 0 2789 160 52 14 chr2 146153356 146153857 -104533997 + MLT2B1 LTR ERVL 1 520 0 236 256 2 85 chr2 146153861 146153952 -104533902 + MIR SINE MIR 35 117 -109 22 0 0 0 chr2 146154088 146154110 -104533744 + AT_rich Low_complexity Low_complexity 1 22 0 285 173 0 0 chr2 146154214 146154266 -104533588 - MLT1K LTR MaLR 0 588 537 21 0 0 0 chr2 146154267 146154288 -104533566 + AT_rich Low_complexity Low_complexity 1 21 0 597 40 0 0 chr2 146154357 146154433 -104533421 + (TC)n Simple_repeat Simple_repeat 2 77 0 285 328 43 26 chr2 146154439 146154555 -104533299 - MLT1K LTR MaLR -189 399 282 1945 271 88 25 chr2 146154604 146155440 -104532414 + L2 LINE L2 2177 3067 -246 214 178 0 0 chr2 146155568 146155613 -104532241 + L2 LINE L2 3119 3163 -150 1563 172 101 0 chr2 146155613 146155921 -104531933 - MER2 DNA MER2_type -1 344 6 1735 191 7 0 chr2 146155923 146156221 -104531633 - AluJo SINE Alu -12 300 1 2381 196 55 41 chr2 146156324 146156891 -104530963 - MLT1E2 LTR MaLR 0 626 52 2325 195 56 41 chr2 146157324 146157879 -104529975 - MLT1E2 LTR MaLR -12 614 52 2391 164 29 2 chr2 146159150 146159565 -104528289 + MSTB LTR MaLR 1 426 0 1158 199 85 4 chr2 146159695 146159966 -104527888 + MER58B DNA MER1_type 49 341 0 253 244 67 22 chr2 146160350 146160440 -104527414 - MLT1K LTR MaLR -172 416 323 203 305 49 12 chr2 146161312 146161394 -104526460 - MIR SINE MIR -10 252 168 273 335 47 37 chr2 146161430 146161645 -104526209 - L2 LINE L2 -837 2477 2261 187 156 0 0 chr2 146162160 146162192 -104525662 - MER5A DNA MER1_type -22 167 136 579 214 35 0 chr2 146162194 146162367 -104525487 + GA-rich Low_complexity Low_complexity 2 180 0 256 179 28 123 chr2 146162367 146162473 -104525381 + MER5A DNA MER1_type 89 184 -5 434 300 98 20 chr2 146162572 146162869 -104524985 - L1ME4a LINE L1 -3 6118 5799 725 150 0 0 chr2 146163105 146163238 -104524616 + L1MA4 LINE L1 6167 6299 -1 266 287 104 26 chr2 146164560 146164675 -104523179 + MIR SINE MIR 58 181 -81 346 279 88 88 chr2 146165798 146166117 -104521737 + L2 LINE L2 2897 3215 -57 351 278 45 21 chr2 146166169 146166281 -104521573 - MIR SINE MIR -90 118 4 213 346 51 45 chr2 146166320 146166476 -104521378 - MIR SINE MIR -40 222 66 24 32 0 0 chr2 146167786 146167817 -104520037 + AT_rich Low_complexity Low_complexity 1 31 0 1522 241 86 26 chr2 146167878 146168297 -104519557 + MLT1H LTR MaLR 1 444 -105 2226 92 0 13 chr2 146168642 146168945 -104518909 - AluSc SINE Alu -10 299 1 1052 212 184 87 chr2 146170794 146171321 -104516533 + MLT1E3 LTR MaLR 1 624 0 2054 217 20 73 chr2 146171424 146172009 -104515845 + MLT2B3 LTR ERVL 1 554 0 293 209 0 33 chr2 146172020 146172111 -104515743 + L1MC4 LINE L1 6614 6701 -1341 464 271 45 15 chr2 146172418 146172551 -104515303 + MLT1K LTR MaLR 94 230 -358 459 333 62 60 chr2 146172707 146173139 -104514715 + MLT1K LTR MaLR 137 569 -19 1575 155 106 0 chr2 146173539 146173803 -104514051 - AluJo SINE Alu -16 296 5 24 0 0 0 chr2 146174307 146174331 -104513523 + AT_rich Low_complexity Low_complexity 1 24 0 319 221 0 0 chr2 146174965 146175033 -104512821 + MER103 DNA DNA 45 112 -54 351 0 0 0 chr2 146175954 146175993 -104511861 + (TG)n Simple_repeat Simple_repeat 1 39 0 190 239 22 22 chr2 146176190 146176236 -104511618 - MIR SINE MIR -139 69 24 2184 103 3 13 chr2 146179364 146179665 -104508189 - AluSx SINE Alu -12 300 3 184 357 80 36 chr2 146179835 146179947 -104507907 + L2 LINE L2 3139 3255 -17 1912 147 21 0 chr2 146180203 146180482 -104507372 + AluJb SINE Alu 1 285 -27 217 309 111 63 chr2 146180519 146180645 -104507209 + L2 LINE L2 3141 3272 0 1990 142 0 13 chr2 146180982 146181285 -104506569 - AluSx SINE Alu -13 299 1 438 149 0 0 chr2 146181311 146181378 -104506476 + Tigger2 DNA MER2_type 1 67 -2651 * 2451 174 7 24 chr2 146181364 146181823 -104506031 + Tigger2 DNA MER2_type 2267 2717 -1 5925 146 24 5 chr2 146181898 146183417 -104504437 - L1MA4 LINE L1 -2 6298 4752 8644 170 19 35 chr2 146186220 146188306 -104499548 + L1PB4 LINE L1 3569 5686 -470 2041 127 47 0 chr2 146188306 146188605 -104499249 + AluSq SINE Alu 1 313 0 8644 170 19 35 chr2 146188605 146188782 -104499072 + L1PB4 LINE L1 5686 5864 -292 555 56 0 0 chr2 146188782 146188853 -104499001 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 8644 170 19 35 chr2 146188853 146189213 -104498641 + L1PB4 LINE L1 5864 6156 0 1269 176 0 14 chr2 146192225 146192441 -104495413 + AluJb SINE Alu 85 297 -15 32 0 0 0 chr2 146192441 146192473 -104495381 + AT_rich Low_complexity Low_complexity 1 32 0 351 44 0 0 chr2 146192604 146192649 -104495205 + (CA)n Simple_repeat Simple_repeat 2 46 0 21 0 0 0 chr2 146193798 146193819 -104494035 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr2 146194269 146194312 -104493542 + AT_rich Low_complexity Low_complexity 1 43 0 613 191 9 0 chr2 146195358 146195473 -104492381 - FLAM_C SINE Alu -25 118 3 2704 97 5 0 chr2 146195493 146195864 -104491990 - THE1C LTR MaLR 0 375 3 9122 124 39 38 chr2 146195866 146197445 -104490409 - THE1C-int LTR MaLR 0 1580 1 2399 129 8 21 chr2 146197445 146197825 -104490029 - THE1C LTR MaLR 0 375 1 256 317 0 58 chr2 146198448 146198552 -104489302 + L2 LINE L2 2989 3086 -186 21 71 0 0 chr2 146201303 146201345 -104486509 + AT_rich Low_complexity Low_complexity 1 42 0 25 51 0 0 chr2 146201374 146201413 -104486441 + AT_rich Low_complexity Low_complexity 1 39 0 3367 141 60 17 chr2 146201913 146202508 -104485346 + LTR26E LTR ERV1 2 622 0 463 254 59 0 chr2 146203146 146203264 -104484590 + MIR SINE MIR 67 191 -71 268 136 23 0 chr2 146204036 146204080 -104483774 - LTR67 LTR ERVL -6 551 507 413 291 168 10 chr2 146204353 146204549 -104483305 + MIR SINE MIR 20 246 -16 954 141 43 22 chr2 146205136 146205320 -104482534 - L1MA9 LINE L1 -70 6242 6055 338 202 0 12 chr2 146205339 146205423 -104482431 + (TA)n Simple_repeat Simple_repeat 2 84 0 282 182 34 23 chr2 146205887 146205975 -104481879 - Charlie7 DNA MER1_type -17 2595 2507 225 0 0 0 chr2 146205985 146206010 -104481844 + (TA)n Simple_repeat Simple_repeat 1 25 0 268 275 9 46 chr2 146206043 146206152 -104481702 - Charlie7 DNA MER1_type -2507 105 1 4728 161 20 4 chr2 146206611 146207424 -104480430 - LTR1B LTR ERV1 0 826 1 202 355 148 26 chr2 146208348 146208503 -104479351 + MIR3 SINE MIR 30 203 -5 1551 172 0 58 chr2 146209946 146210237 -104477617 + AluJo SINE Alu 34 307 -5 541 273 109 14 chr2 146210392 146210612 -104477242 - MIR SINE MIR 0 262 22 357 325 26 19 chr2 146210629 146210783 -104477071 - MIR3 SINE MIR -20 188 34 365 226 61 17 chr2 146211633 146211748 -104476106 + MLT1B LTR MaLR 271 390 0 415 316 92 0 chr2 146211793 146211967 -104475887 + LTR16A LTR ERVL 205 394 -56 887 176 64 0 chr2 146211967 146212178 -104475676 + MER39 LTR ERV1 1 265 -442 183 313 0 0 chr2 146213301 146213349 -104474505 + MIR SINE MIR 93 140 -122 245 313 102 14 chr2 146214721 146214868 -104472986 - MIR SINE MIR -4 258 99 189 74 0 0 chr2 146215891 146215918 -104471936 + (TC)n Simple_repeat Simple_repeat 2 28 0 212 0 36 0 chr2 146216135 146216163 -104471691 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2160 91 0 4 chr2 146216168 146216443 -104471411 - AluSc SINE Alu -35 274 1 5228 170 30 11 chr2 146217565 146218689 -104469165 - L1MC1 LINE L1 -9 6324 5186 1689 143 4 0 chr2 146269579 146269831 -104418023 - AluSx SINE Alu -1 311 59 27 0 0 0 chr2 146269969 146269996 -104417858 + AT_rich Low_complexity Low_complexity 1 27 0 1080 234 87 7 chr2 146270294 146270593 -104417261 - MER2 DNA MER2_type 0 345 23 288 149 45 45 chr2 146271065 146271132 -104416722 - Alu SINE Alu -254 46 1 1060 255 246 30 chr2 146271274 146271679 -104416175 + L2 LINE L2 1951 2267 -1047 2155 107 3 0 chr2 146271679 146271978 -104415876 - AluSx SINE Alu -12 300 1 1060 255 246 30 chr2 146271978 146272105 -104415749 + L2 LINE L2 2267 2598 -716 1610 122 4 9 chr2 146272105 146272334 -104415520 - AluSg/x SINE Alu -10 302 75 225 362 143 0 chr2 146272547 146272652 -104415202 - MER5A DNA MER1_type -43 146 27 236 235 29 0 chr2 146272697 146272765 -104415089 - L1 LINE L1 -3655 2491 2422 237 65 0 0 chr2 146273254 146273285 -104414569 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr2 146274865 146274886 -104412968 + (T)n Simple_repeat Simple_repeat 1 21 0 1811 140 18 0 chr2 146275524 146275810 -104412044 - AluSx SINE Alu -21 291 1 769 281 76 0 chr2 146276355 146276579 -104411275 + MIR SINE MIR 12 252 -10 524 231 35 7 chr2 146277405 146277548 -104410306 + MER69 DNA AcHobo 2380 2526 0 24 32 0 0 chr2 146278072 146278103 -104409751 + AT_rich Low_complexity Low_complexity 1 31 0 282 205 51 13 chr2 146279886 146279964 -104407890 + (TATATG)n Simple_repeat Simple_repeat 3 83 0 762 265 147 29 chr2 146279988 146280354 -104407500 - L1MC4a LINE L1 -1880 5928 5482 874 276 97 46 chr2 146280354 146280850 -104407004 - LTR33 LTR ERVL 0 521 1 762 265 147 29 chr2 146280850 146281000 -104406854 - L1MC4a LINE L1 -2326 5482 5351 310 227 23 78 chr2 146281059 146281187 -104406667 - L1MC4 LINE L1 0 8042 7922 259 256 178 16 chr2 146281298 146281427 -104406427 - L1MC4 LINE L1 -150 7892 7743 319 224 12 0 chr2 146281453 146281538 -104406316 - L1MC4 LINE L1 -384 7658 7573 354 115 0 0 chr2 146281539 146281591 -104406263 - MLT2D LTR ERVL 0 414 363 3006 146 30 2 chr2 146281601 146282135 -104405719 - Tigger1 DNA MER2_type -15 2403 1855 7519 127 8 41 chr2 146282239 146283578 -104404276 - Tigger1 DNA MER2_type -1123 1295 2 2013 117 48 0 chr2 146283578 146283868 -104403986 + AluSg SINE Alu 1 304 -6 1063 101 7 0 chr2 146284088 146284237 -104403617 + AluSg/x SINE Alu 161 310 -2 480 281 0 63 chr2 146284290 146284511 -104403343 - L1MC4a LINE L1 -412 7396 7190 504 180 7 14 chr2 146284528 146284667 -104403187 + CT-rich Low_complexity Low_complexity 2 139 0 862 226 13 26 chr2 146284671 146284697 -104403157 - L1MC4 LINE L1 -940 7102 7077 1525 258 73 65 chr2 146284697 146285353 -104402501 - MLT2F LTR ERVL 0 663 3 862 226 13 26 chr2 146285353 146285560 -104402294 - L1MC4 LINE L1 -965 7077 6872 4367 50 2 2 chr2 146285562 146286098 -104401756 + L1PA7 LINE L1 5612 6147 -7 30 27 0 0 chr2 146286241 146286278 -104401576 + AT_rich Low_complexity Low_complexity 1 37 0 506 271 116 5 chr2 146286570 146286777 -104401077 + L2 LINE L2 3084 3313 0 258 286 71 27 chr2 146288350 146288462 -104399392 - MIR SINE MIR -98 164 48 470 309 103 22 chr2 146288510 146288782 -104399072 - L2 LINE L2 -438 2876 2583 557 300 0 26 chr2 146290728 146290961 -104396893 + AluSg1 SINE Alu 1 227 -82 1820 100 4 20 chr2 146291344 146291594 -104396260 + AluSg SINE Alu 53 298 -12 2244 125 0 0 chr2 146291829 146292141 -104395713 - AluSx SINE Alu 0 312 1 844 234 22 5 chr2 146292189 146292373 -104395481 + MER5A DNA MER1_type 3 189 0 21 0 0 0 chr2 146293472 146293493 -104394361 + AT_rich Low_complexity Low_complexity 1 21 0 222 62 0 0 chr2 146294102 146294134 -104393720 + (T)n Simple_repeat Simple_repeat 1 32 0 2034 115 0 23 chr2 146294197 146294502 -104393352 - AluSx SINE Alu -14 298 1 1879 117 4 4 chr2 146294658 146294923 -104392931 + AluSx SINE Alu 3 267 -45 2479 72 0 0 chr2 146295046 146295352 -104392502 - AluY SINE Alu -5 306 1 432 51 0 0 chr2 146296076 146296135 -104391719 + (GA)n Simple_repeat Simple_repeat 2 60 0 409 281 93 0 chr2 146296247 146296357 -104391497 + MIR SINE MIR 6 133 -129 230 0 0 32 chr2 146296357 146296388 -104391466 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 409 281 93 0 chr2 146296388 146296416 -104391438 + MIR SINE MIR 133 157 -105 274 146 0 0 chr2 146296434 146296475 -104391379 - Alu SINE Alu -259 43 3 1863 159 0 17 chr2 146296775 146297076 -104390778 - AluSx SINE Alu -16 296 1 719 206 109 0 chr2 146297696 146297861 -104389993 + MER5A DNA MER1_type 7 189 0 230 209 70 0 chr2 146297872 146297915 -104389939 + MER5B DNA MER1_type 1 46 -132 1655 187 24 18 chr2 146298059 146298390 -104389464 + MLT1A1 LTR MaLR 1 333 -32 720 235 24 0 chr2 146298544 146298714 -104389140 - MER5A DNA MER1_type 0 189 16 2100 124 0 17 chr2 146298727 146299074 -104388780 - L1P LINE L1 -851 5295 4955 3439 188 24 17 chr2 146299187 146299942 -104387912 - L1P LINE L1 -948 5198 4439 * 5900 94 12 9 chr2 146299936 146300789 -104387065 + L1PA10 LINE L1 5312 6166 -2 407 268 21 0 chr2 146300999 146301096 -104386758 - MER58 DNA MER1_type -237 104 6 202 353 59 0 chr2 146302202 146302287 -104385567 - L2 LINE L2 -50 3222 3133 188 86 29 0 chr2 146302425 146302460 -104385394 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 253 382 105 40 chr2 146302899 146303673 -104384181 + L2 LINE L2 2152 2975 -339 752 304 94 48 chr2 146304399 146304939 -104382915 + L1MEc LINE L1 364 928 -5793 208 244 19 56 chr2 146305111 146305271 -104382583 + A-rich Low_complexity Low_complexity 3 156 0 1162 256 44 33 chr2 146305274 146305731 -104382123 + L1M4 LINE L1 3426 3887 -2259 710 239 60 0 chr2 146305763 146305930 -104381924 + MER58A DNA MER1_type 37 213 -11 2375 48 0 17 chr2 146305930 146306220 -104381634 + AluY SINE Alu 2 286 -25 970 269 86 39 chr2 146306273 146306923 -104380931 + L1M4 LINE L1 4154 4834 -1312 461 283 71 1 chr2 146307413 146307626 -104380228 + L1MEc LINE L1 1719 1908 -4632 1803 145 47 14 chr2 146307700 146307997 -104379857 - AluSx SINE Alu -5 307 1 932 241 141 53 chr2 146308625 146309306 -104378548 - L1MC4 LINE L1 0 8042 7302 496 224 90 0 chr2 146309306 146309462 -104378392 - L1ME3A LINE L1 -163 6007 5838 293 200 150 0 chr2 146309615 146309715 -104378139 - L1ME3A LINE L1 -1924 4222 4108 1190 279 120 21 chr2 146309719 146310717 -104377137 - L1ME3A LINE L1 -2193 3953 2857 786 242 0 30 chr2 146310729 146310927 -104376927 + MER3 DNA MER1_type 18 209 0 248 211 0 0 chr2 146312903 146312955 -104374899 + LTR30 LTR ERV1 1 52 -670 2103 142 303 106 chr2 146312957 146313795 -104374059 + pTR5 LTR ERV1 1436 2438 0 1707 189 77 0 chr2 146313996 146314319 -104373535 + MER7A DNA MER2_type 1 346 0 22 0 0 0 chr2 146314452 146314474 -104373380 + GC_rich Low_complexity Low_complexity 1 22 0 1938 134 3 7 chr2 146314518 146314802 -104373052 + AluSc SINE Alu 1 283 -26 268 218 32 8 chr2 146315667 146315791 -104372063 + (TA)n Simple_repeat Simple_repeat 2 128 0 221 308 44 11 chr2 146316399 146316490 -104371364 - MIR SINE MIR -78 184 91 308 301 87 48 chr2 146318250 146318456 -104369398 + MLT1I LTR MaLR 196 409 0 1407 210 95 20 chr2 146318535 146318883 -104368971 - MLT1A2 LTR MaLR 0 374 1 558 330 43 9 chr2 146319039 146319272 -104368582 + MIR SINE MIR 9 249 -13 21 0 0 0 chr2 146319277 146319298 -104368556 + AT_rich Low_complexity Low_complexity 1 21 0 257 320 90 13 chr2 146319688 146319844 -104368010 + MIR SINE MIR 95 262 0 361 106 0 0 chr2 146322046 146322093 -104365761 + MER8 DNA MER2_type 193 239 0 305 254 16 0 chr2 146322532 146322595 -104365259 - L2 LINE L2 -31 3241 3178 2354 112 0 0 chr2 146322774 146323086 -104364768 + AluSq SINE Alu 1 312 -1 1338 219 171 25 chr2 146323176 146323344 -104364510 - MLT1D LTR MaLR -3 502 360 1202 119 109 14 chr2 146323344 146323554 -104364300 - MER30 DNA MER1_type 0 230 1 1338 219 171 25 chr2 146323554 146323823 -104364031 - MLT1D LTR MaLR -145 360 1 1575 210 31 26 chr2 146323874 146324226 -104363628 + MLT1A1 LTR MaLR 12 365 0 2481 147 15 21 chr2 146324814 146325249 -104362605 - MLT2C2 LTR ERVL -40 480 1 1409 194 103 29 chr2 146326132 146326482 -104361372 - MLT2D LTR ERVL -38 376 1 2187 128 13 13 chr2 146328595 146328970 -104358884 - L1PB1 LINE L1 -1 6150 5776 443 146 0 11 chr2 146328970 146329059 -104358795 + (CA)n Simple_repeat Simple_repeat 2 89 0 3730 146 12 10 chr2 146329059 146330262 -104357592 - L1PB1 LINE L1 -369 5782 4582 347 255 10 10 chr2 146330262 146330360 -104357494 + LTR41 LTR ERVL 90 187 -586 220 80 0 40 chr2 146330963 146331013 -104356841 + (TA)n Simple_repeat Simple_repeat 1 48 0 22 56 0 0 chr2 146331014 146331050 -104356804 + AT_rich Low_complexity Low_complexity 1 36 0 249 359 44 50 chr2 146331262 146331560 -104356294 - L1MEd LINE L1 -5516 603 308 464 190 20 10 chr2 146332594 146332694 -104355160 + MLT1E3 LTR MaLR 67 167 -457 237 239 0 0 chr2 146332885 146332931 -104354923 + (TATG)n Simple_repeat Simple_repeat 1 46 0 1076 318 87 34 chr2 146333080 146333985 -104353869 - HERV16 LTR ERVL -4019 977 25 898 274 44 58 chr2 146334014 146334449 -104353405 - LTR16A LTR ERVL -6 444 16 599 330 114 6 chr2 146334453 146334811 -104353043 + L2 LINE L2 2402 2798 -516 547 292 54 11 chr2 146334840 146335025 -104352829 - MIR SINE MIR -36 226 34 25 0 0 0 chr2 146335194 146335219 -104352635 + AT_rich Low_complexity Low_complexity 1 25 0 182 372 29 15 chr2 146335267 146335404 -104352450 - MIR3 SINE MIR -69 139 1 2281 110 3 0 chr2 146335444 146335753 -104352101 - AluSq SINE Alu 0 313 4 180 77 0 0 chr2 146336092 146336118 -104351736 + (T)n Simple_repeat Simple_repeat 1 26 0 746 332 12 4 chr2 146337117 146337376 -104350478 - MIR SINE MIR 0 262 2 32 0 0 0 chr2 146338204 146338236 -104349618 + AT_rich Low_complexity Low_complexity 1 32 0 2346 95 3 0 chr2 146339162 146339466 -104348388 - AluSp SINE Alu -8 305 1 651 139 108 0 chr2 146340087 146340215 -104347639 - MER58C DNA MER1_type -3 212 64 2599 109 0 11 chr2 146340639 146341007 -104346847 + THE1B LTR MaLR 1 364 0 1145 274 160 15 chr2 146341011 146341181 -104346673 + L1MC4 LINE L1 6459 6603 -1439 2032 167 30 0 chr2 146341181 146341517 -104346337 + MER7A DNA MER2_type 2 345 -1 1145 274 160 15 chr2 146341517 146341814 -104346040 + L1MC4 LINE L1 6603 6994 -1048 3224 94 8 11 chr2 146342342 146342820 -104345034 - L1PA14 LINE L1 0 6161 5685 193 307 120 27 chr2 146343950 146344025 -104343829 + MIR SINE MIR 38 119 -89 551 274 74 23 chr2 146344101 146344316 -104343538 - MIR SINE MIR 0 262 37 21 36 0 0 chr2 146344850 146344878 -104342976 + AT_rich Low_complexity Low_complexity 1 28 0 298 184 0 0 chr2 146344934 146344983 -104342871 + L2 LINE L2 3261 3309 -4 358 266 91 26 chr2 146345681 146345835 -104342019 + L1ME4a LINE L1 5955 6118 -3 378 0 0 0 chr2 146346953 146346995 -104340859 + (TG)n Simple_repeat Simple_repeat 2 43 0 213 292 56 14 chr2 146347038 146347110 -104340744 + MIR SINE MIR 79 153 -109 390 200 0 0 chr2 146348993 146349058 -104338796 - L2 LINE L2 -4 3268 3204 343 349 42 33 chr2 146349590 146349805 -104338049 + L1MC/D LINE L1 5567 5783 -2025 2297 114 0 0 chr2 146349812 146350118 -104337736 + AluSc SINE Alu 1 306 -3 2368 86 0 0 chr2 146350192 146350494 -104337360 + AluY SINE Alu 1 302 -9 560 319 177 43 chr2 146350534 146351098 -104336756 + L2 LINE L2 1869 2508 -806 2193 121 0 0 chr2 146351149 146351447 -104336407 + AluSx SINE Alu 1 298 -14 474 61 0 0 chr2 146351454 146351520 -104336334 + (TCCA)n Simple_repeat Simple_repeat 1 66 0 282 73 0 0 chr2 146351946 146351987 -104335867 + (TC)n Simple_repeat Simple_repeat 1 41 0 342 0 0 0 chr2 146351987 146352025 -104335829 + (TA)n Simple_repeat Simple_repeat 1 38 0 2457 278 122 17 chr2 146352514 146353652 -104334202 + L1MEc LINE L1 117 1374 -5022 4528 180 38 8 chr2 146353830 146355291 -104332563 - L1MA9 LINE L1 -20 6292 4681 405 0 0 0 chr2 146355393 146355438 -104332416 + (TA)n Simple_repeat Simple_repeat 1 45 0 312 70 0 0 chr2 146355943 146355986 -104331868 + (TA)n Simple_repeat Simple_repeat 2 44 0 353 133 0 120 chr2 146356036 146356194 -104331660 + (TAAAAA)n Simple_repeat Simple_repeat 6 144 0 24 0 0 0 chr2 146356733 146356757 -104331097 + AT_rich Low_complexity Low_complexity 1 24 0 357 148 0 0 chr2 146357030 146357091 -104330763 - AluJo SINE Alu -4 298 238 4111 135 51 48 chr2 146357091 146357874 -104329980 - LTR1 LTR ERV1 0 785 1 1125 210 21 34 chr2 146357928 146358166 -104329688 - AluJo SINE Alu -77 235 1 195 42 0 0 chr2 146360890 146360914 -104326940 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 22 35 0 0 chr2 146361018 146361047 -104326807 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr2 146361540 146361566 -104326288 + AT_rich Low_complexity Low_complexity 1 26 0 1835 178 46 22 chr2 146361739 146362154 -104325700 - L1MA8 LINE L1 0 6291 5867 3188 270 78 34 chr2 146362170 146363779 -104324075 - L1MEc LINE L1 -4675 1721 43 23 0 0 0 chr2 146363950 146363973 -104323881 + AT_rich Low_complexity Low_complexity 1 23 0 2045 95 10 10 chr2 146364875 146365170 -104322684 + AluSx SINE Alu 1 295 -17 2566 51 0 3 chr2 146365171 146365482 -104322372 + AluY SINE Alu 2 311 0 329 335 35 18 chr2 146365621 146365791 -104322063 - L1MA8 LINE L1 -2381 5427 5255 204 40 0 0 chr2 146365860 146365885 -104321969 + (CA)n Simple_repeat Simple_repeat 2 26 0 24 32 0 0 chr2 146365902 146365933 -104321921 + AT_rich Low_complexity Low_complexity 1 31 0 939 314 100 28 chr2 146366314 146366785 -104321069 - MLT1G1 LTR MaLR -22 573 69 1935 128 0 47 chr2 146367502 146367821 -104320033 + AluSx SINE Alu 1 305 0 400 316 128 43 chr2 146368379 146368674 -104319180 + L2 LINE L2 2715 3035 -237 696 282 45 10 chr2 146368743 146368945 -104318909 - MIR SINE MIR 0 262 54 201 279 0 15 chr2 146368970 146369038 -104318816 + (TA)n Simple_repeat Simple_repeat 1 67 0 21 0 0 0 chr2 146369123 146369144 -104318710 + AT_rich Low_complexity Low_complexity 1 21 0 2055 127 0 7 chr2 146369506 146369805 -104318049 + AluSx SINE Alu 1 297 -15 1717 138 89 21 chr2 146370238 146370565 -104317289 + THE1C LTR MaLR 27 375 0 1171 44 11 33 chr2 146371019 146371201 -104316653 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 273 29 0 0 chr2 146371203 146371237 -104316617 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 2222 103 0 3 chr2 146371237 146371529 -104316325 - AluSq SINE Alu -22 291 1 292 222 162 20 chr2 146377005 146377104 -104310750 - MLT1J2 LTR MaLR -23 427 315 423 0 0 0 chr2 146377451 146377498 -104310356 + (TG)n Simple_repeat Simple_repeat 2 48 0 1969 113 9 27 chr2 146378079 146378407 -104309447 + MSTA-int LTR MaLR 1259 1580 0 1788 127 147 37 chr2 146378407 146378762 -104309092 + MSTA LTR MaLR 1 394 -34 224 347 27 40 chr2 146379324 146379474 -104308380 - MIR SINE MIR -66 196 49 569 307 202 31 chr2 146379730 146380447 -104307407 + L2 LINE L2 2457 3306 -7 471 357 13 22 chr2 146380471 146380698 -104307156 + MIR SINE MIR 29 253 -9 286 276 10 31 chr2 146381738 146381836 -104306018 - MER5A DNA MER1_type -6 183 88 234 150 0 0 chr2 146381865 146381905 -104305949 + (TCC)n Simple_repeat Simple_repeat 3 42 0 781 248 107 67 chr2 146381916 146382319 -104305535 - L1ME3 LINE L1 -7 6155 5737 467 127 13 13 chr2 146382319 146382398 -104305456 + THE1C LTR MaLR 1 79 -296 2980 134 90 6 chr2 146382398 146382876 -104304978 + THE1C-int LTR MaLR 977 1494 -86 4449 52 21 54 chr2 146382876 146383941 -104303913 + MER11A LTR ERVK 1 1266 0 575 108 0 11 chr2 146383941 146384034 -104303820 + THE1C-int LTR MaLR 1489 1580 0 1208 133 63 3 chr2 146384034 146384314 -104303540 + THE1C LTR MaLR 1 371 -4 1187 221 28 0 chr2 146384316 146384569 -104303285 - L1ME3 LINE L1 -421 5743 5484 1105 245 71 34 chr2 146384581 146385113 -104302741 - L1ME3 LINE L1 -745 5401 4862 183 188 0 0 chr2 146385122 146385154 -104302700 + MER5A DNA MER1_type 136 167 -22 370 333 104 13 chr2 146385276 146385507 -104302347 - MIR SINE MIR -3 259 8 5733 201 48 26 chr2 146385583 146385656 -104302198 - Charlie1a DNA MER1_type -1311 1450 1380 542 125 0 0 chr2 146385656 146385736 -104302118 - MADE1 DNA Mariner 0 80 1 5733 201 48 26 chr2 146385736 146386294 -104301560 - Charlie1a DNA MER1_type -1381 1380 836 1494 284 22 7 chr2 146386294 146386751 -104301103 + LTR16B LTR ERVL 1 464 0 5733 201 48 26 chr2 146386751 146387532 -104300322 - Charlie1a DNA MER1_type -1925 836 6 234 410 78 17 chr2 146387548 146387843 -104300011 - L2 LINE L2 -14 3258 2946 1063 276 39 44 chr2 146389207 146389244 -104298610 - MLT1J2 LTR MaLR -24 426 390 1683 191 73 0 chr2 146389244 146389584 -104298270 + MLT1A1 LTR MaLR 1 365 0 1063 276 39 44 chr2 146389584 146389955 -104297899 - MLT1J2 LTR MaLR -60 390 20 396 211 16 109 chr2 146390074 146390202 -104297652 - L2 LINE L2 -1 3312 3197 443 254 31 83 chr2 146390474 146390667 -104297187 + MIR SINE MIR 80 262 0 1089 177 33 81 chr2 146390689 146390960 -104296894 + MER34B LTR ERV1 11 268 -297 360 165 0 89 chr2 146390981 146391060 -104296794 - Tigger2a DNA MER2_type -2 432 361 182 36 0 36 chr2 146391060 146391088 -104296766 + (TTTC)n Simple_repeat Simple_repeat 4 30 0 339 65 0 0 chr2 146391091 146391137 -104296717 + (TCCC)n Simple_repeat Simple_repeat 4 49 0 1839 184 0 16 chr2 146391154 146391470 -104296384 - AluJb SINE Alu -1 311 1 2172 107 47 28 chr2 146391473 146391837 -104296017 - Tigger2a DNA MER2_type -63 371 1 1231 203 31 14 chr2 146391837 146392123 -104295731 + MER34B LTR ERV1 275 565 0 254 371 14 43 chr2 146392520 146392660 -104295194 + MIR3 SINE MIR 7 142 -66 1757 178 3 3 chr2 146393175 146393461 -104294393 - AluJb SINE Alu -26 286 1 197 309 92 46 chr2 146393974 146394126 -104293728 + MIR SINE MIR 98 256 -6 301 336 33 25 chr2 146394229 146394351 -104293503 - MIR SINE MIR -130 132 10 1320 224 54 12 chr2 146394351 146394686 -104293168 - MLT1D LTR MaLR 0 505 157 26 50 0 0 chr2 146396612 146396652 -104291202 + AT_rich Low_complexity Low_complexity 1 40 0 2034 123 30 3 chr2 146396728 146397028 -104290826 + AluSg SINE Alu 1 308 -2 349 272 122 39 chr2 146397437 146397617 -104290237 + MIR SINE MIR 50 244 -18 233 318 68 61 chr2 146398147 146398295 -104289559 + MIR3 SINE MIR 30 178 -30 471 263 146 84 chr2 146399953 146400264 -104287590 + L1MC4a LINE L1 5901 6191 -1617 857 217 19 14 chr2 146400264 146400471 -104287383 + MER3 DNA MER1_type 2 209 0 471 263 146 84 chr2 146400471 146400740 -104287114 + L1MC4a LINE L1 6191 6517 -1291 640 178 93 16 chr2 146400753 146400882 -104286972 - AluJo SINE Alu -173 139 1 1710 206 62 64 chr2 146400928 146401536 -104286318 + L1MC5 LINE L1 6614 7220 -741 32 0 0 0 chr2 146401659 146401691 -104286163 + AT_rich Low_complexity Low_complexity 1 32 0 402 217 36 0 chr2 146402234 146402400 -104285454 + (TA)n Simple_repeat Simple_repeat 1 172 0 * 456 123 5 87 chr2 146402371 146402566 -104285288 + (TATG)n Simple_repeat Simple_repeat 2 180 0 210 192 23 64 chr2 146402574 146402746 -104285108 + (TATATG)n Simple_repeat Simple_repeat 4 168 0 513 206 44 15 chr2 146402782 146402918 -104284936 + L1MC5 LINE L1 7299 7438 -523 988 242 14 0 chr2 146402918 146403137 -104284717 + MER58A DNA MER1_type 2 223 -1 897 254 39 50 chr2 146403189 146403650 -104284204 + L1MC5 LINE L1 7455 7910 -51 535 229 9 0 chr2 146403893 146404002 -104283852 + MIR SINE MIR 23 132 -130 27 29 0 0 chr2 146404018 146404052 -104283802 + AT_rich Low_complexity Low_complexity 1 34 0 718 242 22 62 chr2 146404134 146404312 -104283542 - MER5A DNA MER1_type 0 189 19 307 324 39 0 chr2 146405777 146405879 -104281975 - L2 LINE L2 0 3313 3208 * 398 317 28 21 chr2 146405876 146406021 -104281833 - MER5A DNA MER1_type -9 180 35 16978 66 19 7 chr2 146406053 146407422 -104280432 - HERV17 LTR ERV1 -6407 2219 813 311 22 65 0 chr2 146407422 146407468 -104280386 + T-rich Low_complexity Low_complexity 2 50 0 16978 66 19 7 chr2 146407468 146408291 -104279563 - HERV17 LTR ERV1 -7813 813 1 2652 67 64 0 chr2 146408291 146408636 -104279218 - LTR17 LTR ERV1 0 780 414 203 226 157 59 chr2 146409003 146409105 -104278749 - MIR SINE MIR -61 201 90 2564 52 0 7 chr2 146410818 146411124 -104276730 - AluY SINE Alu -7 304 1 21 0 0 0 chr2 146412346 146412367 -104275487 + AT_rich Low_complexity Low_complexity 1 21 0 720 157 91 39 chr2 146413604 146413834 -104274020 - Charlie1 DNA MER1_type 0 2761 2520 1887 231 39 18 chr2 146413897 146414442 -104273412 - L1M4 LINE L1 -3365 2781 2226 255 325 12 0 chr2 146414442 146414522 -104273332 + L2 LINE L2 2958 3038 -275 286 284 14 14 chr2 146414526 146414600 -104273254 + L2 LINE L2 3239 3312 -1 398 209 18 27 chr2 146414639 146414749 -104273105 + Charlie1 DNA MER1_type 2198 2306 -455 1019 258 0 8 chr2 146414773 146415013 -104272841 + L1M4 LINE L1 16 253 -6289 596 356 40 0 chr2 146415013 146415238 -104272616 - L2 LINE L2 -381 2933 2700 256 47 23 23 chr2 146417077 146417120 -104270734 + (GA)n Simple_repeat Simple_repeat 2 44 0 324 0 0 0 chr2 146418126 146418162 -104269692 + (TG)n Simple_repeat Simple_repeat 2 37 0 861 152 0 0 chr2 146418198 146418330 -104269524 - FLAM_C SINE Alu -1 132 1 226 0 59 0 chr2 146418835 146418869 -104268985 + (GA)n Simple_repeat Simple_repeat 1 36 0 292 319 84 31 chr2 146420016 146420207 -104267647 - MIR SINE MIR -6 256 56 229 308 0 0 chr2 146420373 146420438 -104267416 + (TA)n Simple_repeat Simple_repeat 2 66 0 469 83 0 167 chr2 146422376 146422472 -104265382 + MADE1 DNA Mariner 1 80 0 2153 135 0 3 chr2 146423287 146423599 -104264255 + AluSx SINE Alu 1 311 -1 285 208 52 10 chr2 146423743 146423839 -104264015 + L1ME4a LINE L1 6007 6106 -15 916 161 4 128 chr2 146424290 146424532 -104263322 + AluJo SINE Alu 87 298 -14 1146 157 22 0 chr2 146425118 146425303 -104262551 + MER5A DNA MER1_type 1 189 0 2316 94 0 0 chr2 146425670 146425979 -104261875 - AluY SINE Alu -2 309 1 2636 101 8 16 chr2 146426782 146427160 -104260694 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr2 146427526 146427547 -104260307 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 146427955 146427976 -104259878 + (A)n Simple_repeat Simple_repeat 1 21 0 185 378 14 0 chr2 146429264 146429338 -104258516 + MIR SINE MIR 20 94 -168 2234 119 0 3 chr2 146429640 146429943 -104257911 - AluSx SINE Alu -8 304 3 1983 97 7 35 chr2 146430110 146430426 -104257428 + AluSg SINE Alu 1 308 0 849 262 68 81 chr2 146430484 146430926 -104256928 + LTR41 LTR ERVL 1 436 -337 741 274 54 73 chr2 146430924 146431333 -104256521 + LTR41 LTR ERVL 367 767 -6 * 1498 88 0 0 chr2 146431697 146431878 -104255976 + AluY SINE Alu 3 183 -128 719 89 0 45 chr2 146432193 146432336 -104255518 + AluY SINE Alu 178 315 0 692 194 16 0 chr2 146432575 146432699 -104255155 - FLAM_A SINE Alu -3 130 5 606 294 81 18 chr2 146433669 146434065 -104253789 - L1ME LINE L1 -4985 1085 701 278 345 51 102 chr2 146434066 146434321 -104253533 + L2 LINE L2 3017 3258 -14 1298 112 5 15 chr2 146434672 146434877 -104252977 - L1PB2 LINE L1 -2 6149 5947 864 167 131 20 chr2 146435103 146435301 -104252553 + MSTA LTR MaLR 1 220 -208 304 197 2 1 chr2 146435271 146435352 -104252502 + MSTA LTR MaLR 103 199 -187 * 6368 88 14 3 chr2 146435352 146436727 -104251127 + L1PA8A LINE L1 4753 6174 0 1120 156 98 40 chr2 146436728 146436805 -104251049 + MSTA LTR MaLR 191 262 -166 5244 167 25 30 chr2 146436805 146437881 -104249973 + MER11C LTR ERVK 1 1071 0 1120 156 98 40 chr2 146437881 146438028 -104249826 + MSTA LTR MaLR 262 428 0 204 125 0 0 chr2 146438368 146438400 -104249454 + (TCCA)n Simple_repeat Simple_repeat 2 33 0 312 330 128 34 chr2 146438453 146438811 -104249043 - L2 LINE L2 -86 3227 2829 221 236 0 0 chr2 146439131 146439186 -104248668 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1019 236 165 65 chr2 146439292 146439677 -104248177 + LTR50 LTR ERVL 1 453 -342 1120 217 42 0 chr2 146439677 146439940 -104247914 + ORSL DNA AcHobo 1 274 -1 1019 236 165 65 chr2 146439940 146440075 -104247779 + LTR50 LTR ERVL 453 573 -222 1173 138 98 80 chr2 146440080 146440355 -104247499 - MLT1B LTR MaLR -108 282 3 235 304 177 39 chr2 146440362 146440747 -104247107 - L1MC/D LINE L1 -2021 5787 5350 199 291 55 18 chr2 146440966 146441076 -104246778 + L2 LINE L2 3118 3231 -82 357 82 0 0 chr2 146441146 146441195 -104246659 + (TG)n Simple_repeat Simple_repeat 2 50 0 48 0 0 0 chr2 146441402 146441450 -104246404 + AT_rich Low_complexity Low_complexity 1 48 0 589 323 40 22 chr2 146441767 146441993 -104245861 + MIR SINE MIR 9 238 -24 21 36 0 0 chr2 146442412 146442440 -104245414 + AT_rich Low_complexity Low_complexity 1 28 0 303 250 0 0 chr2 146442975 146443075 -104244779 + (TA)n Simple_repeat Simple_repeat 2 101 0 39 38 0 0 chr2 146443250 146443303 -104244551 + AT_rich Low_complexity Low_complexity 1 53 0 201 195 0 24 chr2 146443672 146443713 -104244141 - L2 LINE L2 -4 3309 3270 264 59 0 0 chr2 146443903 146443937 -104243917 + (TC)n Simple_repeat Simple_repeat 1 34 0 321 26 0 0 chr2 146443937 146443975 -104243879 + (TG)n Simple_repeat Simple_repeat 1 38 0 369 354 20 20 chr2 146445785 146445932 -104241922 - L2 LINE L2 -1 3271 3125 757 198 130 34 chr2 146446492 146446699 -104241155 + MLT1A2 LTR MaLR 85 311 -63 1891 138 0 35 chr2 146446795 146447078 -104240776 + AluSx SINE Alu 1 273 -39 276 225 79 34 chr2 146447092 146447181 -104240673 + Charlie8 DNA MER1_type 182 274 -2143 2241 108 3 0 chr2 146447343 146447631 -104240223 - AluSx SINE Alu -18 294 6 212 0 36 0 chr2 146448287 146448315 -104239539 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 1457 203 7 38 chr2 146448327 146448618 -104239236 - AluJb SINE Alu -30 282 1 308 223 58 93 chr2 146448693 146448832 -104239022 - LTR16A LTR ERVL -35 415 282 186 43 0 0 chr2 146449263 146449286 -104238568 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3540 199 47 19 chr2 146449292 146450135 -104237719 - L1MB8 LINE L1 -6 6888 6016 2502 58 0 0 chr2 146450135 146450430 -104237424 - AluY SINE Alu -16 295 1 3540 199 47 19 chr2 146450430 146450551 -104237303 - L1MB8 LINE L1 -878 6016 5900 11114 196 105 5 chr2 146550551 146554420 -104133434 - L1MB8 LINE L1 -2597 4265 6 351 0 0 0 chr2 146554816 146554855 -104132999 + (TG)n Simple_repeat Simple_repeat 2 40 0 203 321 57 57 chr2 146555025 146555184 -104132670 - MIR SINE MIR -28 234 76 365 315 67 27 chr2 146555253 146555402 -104132452 - MIR SINE MIR -88 174 20 1423 283 92 6 chr2 146556036 146556706 -104131148 + L1MCc LINE L1 839 1571 -4851 22 0 0 0 chr2 146556786 146556808 -104131046 + AT_rich Low_complexity Low_complexity 1 22 0 524 300 40 48 chr2 146556852 146557328 -104130526 + L1MCc LINE L1 1704 2175 -4766 1501 147 94 18 chr2 146557632 146557918 -104129936 + AluSc SINE Alu 1 308 -1 322 305 30 24 chr2 146558004 146558171 -104129683 - L1MC/D LINE L1 -2323 5554 5387 201 94 0 0 chr2 146558764 146558796 -104129058 + (TA)n Simple_repeat Simple_repeat 1 32 0 2313 281 69 50 chr2 146558902 146559562 -104128292 - L1MC/D LINE L1 -5146 1250 604 1973 136 3 3 chr2 146559562 146559857 -104127997 + AluSx SINE Alu 1 295 -17 2313 281 69 50 chr2 146559857 146560383 -104127471 - L1MC/D LINE L1 -5792 604 38 2172 110 7 3 chr2 146560383 146560691 -104127163 - AluSc SINE Alu 0 309 1 2313 281 69 50 chr2 146560691 146560713 -104127141 - L1MC/D LINE L1 -6358 38 18 560 288 55 25 chr2 146560725 146561051 -104126803 - L1M4 LINE L1 -1324 4822 4487 36 70 0 0 chr2 146561056 146561127 -104126727 + AT_rich Low_complexity Low_complexity 1 71 0 740 297 90 45 chr2 146561528 146561972 -104125882 + LTR16B LTR ERVL 1 464 0 422 348 43 45 chr2 146561974 146562350 -104125504 + HERV16 LTR ERVL 3 377 -4619 * 754 328 53 40 chr2 146562325 146562407 -104125447 + HERV16 LTR ERVL 1182 1261 -3735 3179 114 39 102 chr2 146562407 146563054 -104124800 + MER4B LTR ERV1 1 606 -4 754 328 53 40 chr2 146563054 146563367 -104124487 + HERV16 LTR ERVL 1261 1582 -3414 1800 108 90 8 chr2 146563457 146563725 -104124129 + AluSx SINE Alu 2 291 -21 672 298 46 83 chr2 146563818 146564144 -104123710 + HERV16 LTR ERVL 1881 2194 -3570 3014 257 54 65 chr2 146564310 146566872 -104120982 + L1ME LINE L1 13 2696 -3950 21 0 0 0 chr2 146566879 146566900 -104120954 + AT_rich Low_complexity Low_complexity 1 21 0 1319 222 102 0 chr2 146566934 146567258 -104120596 + L1ME LINE L1 5775 6131 -551 229 45 23 45 chr2 146567258 146567302 -104120552 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 716 152 165 13 chr2 146567306 146567464 -104120390 + MER46B DNA MER2_type 2 58 -178 267 103 0 0 chr2 146567569 146567608 -104120246 + (CA)n Simple_repeat Simple_repeat 2 40 0 254 229 73 42 chr2 146568338 146568434 -104119420 - MIR SINE MIR -75 133 35 284 388 51 0 chr2 146568456 146568652 -104119202 - L3 LINE CR1 -197 1380 1175 1074 144 0 0 chr2 146568727 146568907 -104118947 + (TA)n Simple_repeat Simple_repeat 1 180 0 767 134 8 0 chr2 146568907 146569026 -104118828 - FLAM_C SINE Alu -13 120 1 357 229 133 9 chr2 146569171 146569276 -104118578 - MER94 DNA DNA -1 133 16 186 350 49 32 chr2 146570314 146570437 -104117417 + MIR3 SINE MIR 59 183 -25 22 35 0 0 chr2 146570565 146570594 -104117260 + AT_rich Low_complexity Low_complexity 1 29 0 295 313 68 14 chr2 146570747 146570894 -104116960 + MIR SINE MIR 74 228 -34 272 291 27 9 chr2 146571144 146571254 -104116600 + L1ME LINE L1 6102 6213 -406 31 44 0 0 chr2 146571295 146571340 -104116514 + AT_rich Low_complexity Low_complexity 1 45 0 800 118 0 8 chr2 146571378 146571497 -104116357 + FLAM_C SINE Alu 1 118 -15 22 35 0 0 chr2 146571497 146571526 -104116328 + AT_rich Low_complexity Low_complexity 1 29 0 257 250 42 0 chr2 146571741 146571813 -104116041 - MIR3 SINE MIR -50 158 84 238 270 27 40 chr2 146572144 146572218 -104115636 - L3b LINE CR1 -281 1302 1230 2193 94 0 10 chr2 146572252 146572561 -104115293 - AluY SINE Alu -5 306 1 1990 134 3 3 chr2 146572604 146572902 -104114952 - AluSx SINE Alu -14 298 1 274 400 8 0 chr2 146573361 146573481 -104114373 + MIR3 SINE MIR 40 160 -48 234 0 0 0 chr2 146573967 146573993 -104113861 + (T)n Simple_repeat Simple_repeat 1 26 0 2299 157 7 30 chr2 146574642 146575049 -104112805 + MLT2D LTR ERVL 2 399 -15 21 36 0 0 chr2 146575597 146575625 -104112229 + AT_rich Low_complexity Low_complexity 1 28 0 233 206 20 59 chr2 146575848 146575950 -104111904 - HAL1b LINE L1 -512 836 739 22 70 0 0 chr2 146576011 146576054 -104111800 + AT_rich Low_complexity Low_complexity 1 43 0 239 361 82 54 chr2 146576497 146576849 -104111005 + L2 LINE L2 883 1244 -2070 210 242 25 92 chr2 146576894 146577014 -104110840 + L2 LINE L2 1648 1759 -1555 4722 189 20 3 chr2 146579407 146580377 -104107477 - L1 LINE L1 -1120 5026 4041 1504 145 94 6 chr2 146580393 146580702 -104107152 + L1P5 LINE L1 5063 5426 -725 188 35 35 0 chr2 146580702 146580731 -104107123 + (CAA)n Simple_repeat Simple_repeat 1 30 0 1504 145 94 6 chr2 146580731 146580874 -104106980 + L1P5 LINE L1 5426 5555 -596 321 200 146 27 chr2 146582054 146582164 -104105690 - MER106A DNA MER1_type -6 230 108 359 266 107 18 chr2 146582193 146582362 -104105492 - MER106A DNA MER1_type -52 184 1 269 361 34 54 chr2 146584175 146584380 -104103474 + MIR SINE MIR 33 233 -29 378 268 169 0 chr2 146584756 146584898 -104102956 + MIR SINE MIR 47 212 -50 225 317 58 25 chr2 146585795 146585915 -104101939 + L2 LINE L2 3144 3267 -5 21 0 0 0 chr2 146587577 146587598 -104100256 + AT_rich Low_complexity Low_complexity 1 21 0 2500 51 0 29 chr2 146587635 146587951 -104099903 + AluY SINE Alu 3 309 -2 22 0 0 0 chr2 146588415 146588437 -104099417 + AT_rich Low_complexity Low_complexity 1 22 0 192 374 101 14 chr2 146588458 146588597 -104099257 + L2 LINE L2 2602 2752 -562 345 88 59 128 chr2 146588839 146588941 -104098913 - MER53 DNA DNA 0 189 95 395 292 156 7 chr2 146589226 146589380 -104098474 + MIR SINE MIR 52 228 -34 576 301 108 44 chr2 146589500 146589982 -104097872 + LTR33 LTR ERVL 9 521 0 46 16 0 16 chr2 146590859 146590880 -104096974 + AT_rich Low_complexity Low_complexity 1 21 -42 2237 84 0 0 chr2 146590880 146591167 -104096687 + AluY SINE Alu 2 288 -23 46 16 0 16 chr2 146591167 146591209 -104096645 + AT_rich Low_complexity Low_complexity 21 63 0 28 48 0 0 chr2 146591285 146591327 -104096527 + AT_rich Low_complexity Low_complexity 1 42 0 270 0 0 0 chr2 146591652 146591682 -104096172 + (TG)n Simple_repeat Simple_repeat 1 30 0 306 269 213 21 chr2 146593261 146593402 -104094452 - MER91B DNA MER1_type -11 179 12 23 33 0 0 chr2 146594891 146594921 -104092933 + AT_rich Low_complexity Low_complexity 1 30 0 2209 109 0 3 chr2 146594946 146595250 -104092604 - AluSx SINE Alu -9 303 1 266 312 64 0 chr2 146595342 146595451 -104092403 + MER20B DNA MER1_type 36 151 -632 782 146 8 0 chr2 146595662 146595785 -104092069 - MLT2B1 LTR ERVL -393 127 4 25 51 0 0 chr2 146595939 146595978 -104091876 + AT_rich Low_complexity Low_complexity 1 39 0 1538 268 82 49 chr2 146596269 146597225 -104090629 - L2 LINE L2 -64 3249 2249 436 308 0 8 chr2 146597267 146597400 -104090454 - MLT1G1 LTR MaLR 0 595 464 250 245 0 0 chr2 146597409 146597462 -104090392 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 711 29 29 0 chr2 146597463 146597565 -104090289 + (TCTA)n Simple_repeat Simple_repeat 1 105 0 317 388 21 16 chr2 146597673 146597915 -104089939 - L2 LINE L2 -356 2958 2716 202 130 43 22 chr2 146598366 146598412 -104089442 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 678 283 14 27 chr2 146598493 146598712 -104089142 - MIR SINE MIR -10 252 37 495 283 33 26 chr2 146599985 146600137 -104087717 - L2 LINE L2 -1 3312 3160 957 126 0 27 chr2 146600198 146600381 -104087473 + (TTCCC)n Simple_repeat Simple_repeat 1 178 0 763 206 0 0 chr2 146600398 146600529 -104087325 - FLAM_C SINE Alu -2 131 1 245 292 135 0 chr2 146600560 146600649 -104087205 - L2 LINE L2 -264 3049 2949 504 298 62 27 chr2 146600836 146601061 -104086793 + MIR SINE MIR 30 262 0 1540 193 25 0 chr2 146601967 146602241 -104085613 + AluJo SINE Alu 2 282 -30 22 0 0 0 chr2 146602860 146602882 -104084972 + AT_rich Low_complexity Low_complexity 1 22 0 285 275 65 61 chr2 146602888 146603117 -104084737 - HAL1 LINE L1 -8 2499 2270 2153 123 0 0 chr2 146603135 146603437 -104084417 + AluSg SINE Alu 1 302 -8 248 273 114 0 chr2 146603719 146603807 -104084047 - HAL1 LINE L1 -337 2170 2073 705 295 89 85 chr2 146604099 146604397 -104083457 - HAL1 LINE L1 -616 1891 1596 410 0 20 0 chr2 146604397 146604447 -104083407 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 705 295 89 85 chr2 146604447 146605217 -104082637 - HAL1 LINE L1 -911 1596 819 279 71 0 0 chr2 146606272 146606314 -104081540 + (TCTCTG)n Simple_repeat Simple_repeat 6 47 0 219 36 0 0 chr2 146606314 146606342 -104081512 + (TG)n Simple_repeat Simple_repeat 2 29 0 2080 131 16 0 chr2 146608461 146608766 -104079088 - AluSq SINE Alu -3 310 1 779 284 107 20 chr2 146608999 146609390 -104078464 + LTR33A LTR ERVL 99 523 0 765 344 46 23 chr2 146610216 146610608 -104077246 - L2 LINE L2 0 3313 2913 2469 146 5 0 chr2 146611028 146611425 -104076429 - MER57A LTR ERV1 -4 399 1 325 338 19 19 chr2 146612637 146612791 -104075063 + L3b LINE CR1 1116 1269 -314 351 0 0 0 chr2 146613075 146613114 -104074740 + (TG)n Simple_repeat Simple_repeat 2 40 0 396 0 0 0 chr2 146613435 146613479 -104074375 + (TG)n Simple_repeat Simple_repeat 1 44 0 447 174 0 0 chr2 146614850 146614936 -104072918 + (CATA)n Simple_repeat Simple_repeat 1 86 0 201 368 13 0 chr2 146615637 146615713 -104072141 - L2 LINE L2 0 3313 3237 747 169 41 12 chr2 146615828 146616000 -104071854 + L1MA9 LINE L1 6133 6309 -3 466 275 53 8 chr2 146616121 146616252 -104071602 - L1ME LINE L1 -488 5633 5497 383 314 103 33 chr2 146617455 146617697 -104070157 - MIR SINE MIR -1 261 3 2111 130 0 0 chr2 146619984 146620292 -104067562 - AluSx SINE Alu -4 308 1 266 200 0 0 chr2 146620408 146620453 -104067401 + L2 LINE L2 3265 3309 -4 256 200 25 0 chr2 146622861 146622941 -104064913 + GA-rich Low_complexity Low_complexity 1 82 0 264 59 0 0 chr2 146623001 146623035 -104064819 + (T)n Simple_repeat Simple_repeat 1 34 0 510 65 0 0 chr2 146624159 146624236 -104063618 - L1PA8 LINE L1 0 6172 6096 313 331 66 28 chr2 146624690 146624871 -104062983 + MIR SINE MIR 44 231 -31 1338 203 0 60 chr2 146625008 146625324 -104062530 - AluJb SINE Alu -4 308 12 2098 132 0 0 chr2 146631551 146631855 -104055999 - AluSc SINE Alu -5 304 1 2287 77 7 0 chr2 146631865 146632165 -104055689 - AluY SINE Alu -9 302 1 474 311 79 18 chr2 146632165 146632393 -104055461 + MIR SINE MIR 20 261 -1 732 268 152 28 chr2 146632397 146632830 -104055024 - L1ME1 LINE L1 -18 6408 5937 2154 232 31 7 chr2 146632937 146633540 -104054314 - L1ME1 LINE L1 -1098 5308 4691 865 299 89 11 chr2 146633507 146634155 -104053699 - L1ME1 LINE L1 -2781 3625 2927 * 523 128 96 0 chr2 146634221 146634315 -104053539 - MER58 DNA MER1_type 0 2420 2318 436 293 10 0 chr2 146634326 146634425 -104053429 - MER58 DNA MER1_type -241 100 1 352 222 95 74 chr2 146634426 146634615 -104053239 - L1ME1 LINE L1 -3510 2896 2704 901 231 90 91 chr2 146634627 146634651 -104053203 - L1ME1 LINE L1 -4889 1517 1494 467 46 31 0 chr2 146634651 146634716 -104053138 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 901 231 90 91 chr2 146634716 146635013 -104052841 - L1ME1 LINE L1 -4912 1494 1198 2251 166 38 42 chr2 146635013 146635518 -104052336 - L1MA7 LINE L1 -1 6290 5788 901 231 90 91 chr2 146635518 146635987 -104051867 - L1ME1 LINE L1 -5208 1198 762 294 319 91 26 chr2 146636011 146636252 -104051602 - L1ME1 LINE L1 -5573 823 568 22 0 0 0 chr2 146637149 146637171 -104050683 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr2 146637450 146637484 -104050370 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 146638289 146638310 -104049544 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr2 146639246 146639278 -104048576 + AT_rich Low_complexity Low_complexity 1 32 0 470 280 91 11 chr2 146640435 146640610 -104047244 + MIR SINE MIR 74 262 0 47 53 0 0 chr2 146640630 146640705 -104047149 + AT_rich Low_complexity Low_complexity 1 75 0 3167 100 1 0 chr2 146640717 146641162 -104046692 - L1PA6 LINE L1 -34 6120 5675 403 273 220 13 chr2 146641472 146641622 -104046232 + MER5A DNA MER1_type 9 189 0 405 368 42 0 chr2 146641639 146641805 -104046049 - MER5B DNA MER1_type 0 178 6 225 254 0 0 chr2 146641890 146641961 -104045893 + (CATA)n Simple_repeat Simple_repeat 2 72 0 416 252 73 24 chr2 146642106 146642229 -104045625 - MIR SINE MIR -89 173 45 252 333 144 29 chr2 146642326 146642500 -104045354 + L2 LINE L2 2542 2735 -579 223 350 0 10 chr2 146645696 146645793 -104042061 + GA-rich Low_complexity Low_complexity 1 96 0 33 25 0 0 chr2 146646020 146646060 -104041794 + AT_rich Low_complexity Low_complexity 1 40 0 208 229 0 49 chr2 146646318 146646379 -104041475 + CT-rich Low_complexity Low_complexity 4 61 0 180 152 0 0 chr2 146647472 146647505 -104040349 + CT-rich Low_complexity Low_complexity 1 33 0 324 327 18 9 chr2 146647731 146647844 -104040010 + L2 LINE L2 3195 3308 -5 28 48 0 0 chr2 146647935 146647977 -104039877 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr2 146648654 146648676 -104039178 + AT_rich Low_complexity Low_complexity 1 22 0 2086 91 59 0 chr2 146651690 146651976 -104035878 - AluY SINE Alu -8 303 1 351 307 133 18 chr2 146652142 146652367 -104035487 - HAL1 LINE L1 -1395 1112 862 582 119 36 25 chr2 146653136 146653262 -104034592 - THE1B LTR MaLR 0 364 266 7376 95 2 2 chr2 146653262 146654251 -104033603 - THE1B-int LTR MaLR -591 989 1 2078 133 47 39 chr2 146654251 146654612 -104033242 - THE1B LTR MaLR 0 364 1 29 0 0 0 chr2 146654836 146654865 -104032989 + AT_rich Low_complexity Low_complexity 1 29 0 656 284 25 25 chr2 146654947 146655144 -104032710 - MIR SINE MIR -30 232 36 459 299 21 14 chr2 146656123 146656267 -104031587 + MIR SINE MIR 86 230 -32 1625 173 20 33 chr2 146656656 146656957 -104030897 + AluJb SINE Alu 1 297 -15 396 0 0 0 chr2 146657258 146657302 -104030552 + (TA)n Simple_repeat Simple_repeat 2 45 0 528 264 137 38 chr2 146657412 146657624 -104030230 - L1MC4a LINE L1 -165 5956 5724 475 298 49 17 chr2 146658239 146658460 -104029394 - L1MC4a LINE L1 -461 5660 5505 22 0 0 0 chr2 146658942 146658964 -104028890 + AT_rich Low_complexity Low_complexity 1 22 0 2138 106 7 10 chr2 146659204 146659507 -104028347 - AluSc SINE Alu -7 302 1 522 119 0 0 chr2 146661494 146661578 -104026276 + (TTCC)n Simple_repeat Simple_repeat 4 87 0 224 286 0 14 chr2 146661859 146661929 -104025925 - L2 LINE L2 0 3313 3245 22 56 0 0 chr2 146662473 146662509 -104025345 + AT_rich Low_complexity Low_complexity 1 36 0 29 28 0 0 chr2 146663138 146663174 -104024680 + AT_rich Low_complexity Low_complexity 1 36 0 239 276 81 92 chr2 146663428 146663602 -104024252 + MIR SINE MIR 49 220 -42 3277 164 36 23 chr2 146663942 146664606 -104023248 - L1MA10 LINE L1 -8 6326 5654 25 65 0 0 chr2 146665123 146665169 -104022685 + AT_rich Low_complexity Low_complexity 1 46 0 345 245 0 0 chr2 146665684 146665786 -104022068 + CT-rich Low_complexity Low_complexity 3 104 0 266 306 72 45 chr2 146665797 146665908 -104021946 - L2 LINE L2 -4 3309 3196 245 29 29 0 chr2 146666139 146666173 -104021681 + (TG)n Simple_repeat Simple_repeat 2 36 0 236 277 11 11 chr2 146666293 146666387 -104021467 + L1M4 LINE L1 2320 2413 -3733 415 235 30 0 chr2 146667032 146667164 -104020690 + L1M4 LINE L1 4299 4434 -1712 * 1441 291 90 38 chr2 146667161 146668689 -104019165 + L1MB5 LINE L1 2922 4528 -1618 2063 16 0 24 chr2 146668835 146669089 -104018765 + L1PA2 LINE L1 5904 6151 -4 443 306 47 15 chr2 146669196 146669666 -104018188 + L1MB5 LINE L1 5030 5508 -658 189 335 95 38 chr2 146669790 146669948 -104017906 - L2 LINE L2 -874 2440 2274 260 301 89 16 chr2 146669995 146670118 -104017736 - MER94 DNA DNA -2 132 1 192 77 0 0 chr2 146671107 146671133 -104016721 + (T)n Simple_repeat Simple_repeat 1 26 0 795 281 94 31 chr2 146671818 146672338 -104015516 - L1MC4 LINE L1 -589 7453 6901 2350 94 3 0 chr2 146672339 146672646 -104015208 - AluSp SINE Alu -5 308 1 484 277 74 63 chr2 146672667 146672938 -104014916 + L1MC4 LINE L1 7624 7897 -145 613 197 47 31 chr2 146673032 146673159 -104014695 + FLAM_A SINE Alu 4 132 -1 198 0 0 0 chr2 146673958 146673980 -104013874 + (CA)n Simple_repeat Simple_repeat 2 23 0 29 0 0 0 chr2 146674383 146674412 -104013442 + AT_rich Low_complexity Low_complexity 1 29 0 211 121 76 15 chr2 146675432 146675498 -104012356 + (TA)n Simple_repeat Simple_repeat 2 71 0 242 200 0 33 chr2 146677011 146677071 -104010783 + (TA)n Simple_repeat Simple_repeat 1 58 0 205 162 0 0 chr2 146678678 146678715 -104009139 + A-rich Low_complexity Low_complexity 6 42 0 203 298 154 10 chr2 146679313 146679417 -104008437 + L2 LINE L2 3195 3313 0 807 174 60 27 chr2 146679899 146680083 -104007771 - MER31B LTR ERV1 -9 457 268 3325 153 35 0 chr2 146680462 146681012 -104006842 + LTR26 LTR ERV1 1 569 -34 188 344 117 16 chr2 146681152 146681280 -104006574 + MIR SINE MIR 20 160 -102 192 338 78 0 chr2 146681452 146681529 -104006325 + MIR SINE MIR 59 141 -67 21 57 0 0 chr2 146683180 146683215 -104004639 + AT_rich Low_complexity Low_complexity 1 35 0 683 154 0 0 chr2 146683739 146683843 -104004011 + AluSq/x SINE Alu 1 104 -209 2880 195 54 8 chr2 146683843 146684470 -104003384 + L1MB5 LINE L1 5511 6166 -8 2168 166 34 5 chr2 146684734 146685150 -104002704 + MSTA LTR MaLR 1 428 0 700 156 23 81 chr2 146685391 146685564 -104002290 - L1MA9 LINE L1 0 6312 6150 2459 113 25 0 chr2 146686734 146687087 -104000767 + THE1B LTR MaLR 1 362 -2 255 333 43 21 chr2 146687143 146687236 -104000618 + L2 LINE L2 3173 3267 -5 28 29 0 0 chr2 146687393 146687428 -104000426 + AT_rich Low_complexity Low_complexity 1 35 0 1179 251 96 23 chr2 146688293 146688720 -103999134 + L1MCc LINE L1 22 479 -5944 321 288 17 25 chr2 146688826 146688944 -103998910 + L1MCc LINE L1 653 769 -5654 1506 280 66 16 chr2 146688969 146689247 -103998607 + L1M4 LINE L1 3730 3993 -2153 1406 195 35 32 chr2 146689247 146689529 -103998325 + AluSx SINE Alu 1 283 -19 441 0 0 0 chr2 146689530 146689579 -103998275 + (CA)n Simple_repeat Simple_repeat 2 50 0 1506 280 66 16 chr2 146689579 146689919 -103997935 + L1M4 LINE L1 3992 4381 -1765 342 291 10 0 chr2 146689968 146690071 -103997783 + L1ME1 LINE L1 6058 6161 -5 387 299 130 5 chr2 146690216 146690400 -103997454 + MIR SINE MIR 6 212 -50 23 68 0 0 chr2 146690427 146690471 -103997383 + AT_rich Low_complexity Low_complexity 1 44 0 1774 166 68 0 chr2 146690819 146691144 -103996710 + MER7A DNA MER2_type 2 346 0 521 294 49 20 chr2 146691300 146691504 -103996350 + MIR SINE MIR 49 258 -4 231 36 0 0 chr2 146691867 146691895 -103995959 + (CA)n Simple_repeat Simple_repeat 2 29 0 186 43 0 0 chr2 146691894 146691917 -103995937 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 22 0 0 0 chr2 146692409 146692431 -103995423 + AT_rich Low_complexity Low_complexity 1 22 0 561 345 58 79 chr2 146693359 146693776 -103994078 - L2 LINE L2 -28 3244 2837 338 235 99 0 chr2 146694551 146694632 -103993222 + MIR SINE MIR 84 172 -90 254 284 29 29 chr2 146694717 146694819 -103993035 + MIR SINE MIR 156 257 -5 2596 288 98 61 chr2 146695057 146696156 -103991698 + L2 LINE L2 421 1592 -1722 1768 180 12 47 chr2 146696156 146696557 -103991297 + MLT1B LTR MaLR 3 389 -1 2596 288 98 61 chr2 146696557 146696955 -103990899 + L2 LINE L2 1592 1974 -1340 674 285 112 74 chr2 146696977 146697149 -103990705 + L2 LINE L2 2246 2410 -904 1969 119 46 35 chr2 146697149 146697520 -103990334 + THE1C LTR MaLR 1 375 0 674 285 112 74 chr2 146697520 146697876 -103989978 + L2 LINE L2 2410 2794 -520 450 290 77 12 chr2 146698015 146698184 -103989670 + L2 LINE L2 3134 3313 0 283 296 9 46 chr2 146698477 146698585 -103989269 + LTR16C LTR ERVL 280 383 -108 7470 41 0 0 chr2 146698726 146699632 -103988222 - L1PA4 LINE L1 -1723 4423 3518 7843 41 3 0 chr2 146699632 146701350 -103986504 + L1PA4 LINE L1 4429 6150 -5 5587 42 1 0 chr2 146701350 146702023 -103985831 + L1PA4 LINE L1 5470 6154 -1 31 0 0 0 chr2 146702024 146702055 -103985799 + AT_rich Low_complexity Low_complexity 1 31 0 229 304 14 72 chr2 146703781 146703919 -103983935 - MIR SINE MIR -44 218 89 2014 162 91 12 chr2 146704608 146705035 -103982819 - LOR1b LTR ERV1 0 461 1 320 310 16 54 chr2 146706164 146706293 -103981561 - MIR SINE MIR -119 143 20 261 291 68 34 chr2 146706882 146706999 -103980855 - L2 LINE L2 -15 3257 3137 482 48 16 0 chr2 146707266 146707328 -103980526 - U7 snRNA snRNA 0 63 1 205 328 0 0 chr2 146707681 146707745 -103980109 + GA-rich Low_complexity Low_complexity 4 67 0 1080 259 0 0 chr2 146709212 146709455 -103978399 + AluJo SINE Alu 47 289 -23 291 224 0 0 chr2 146709455 146709531 -103978323 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 212 222 0 0 chr2 146709837 146709882 -103977972 + MIR SINE MIR 218 262 0 428 306 31 5 chr2 146710533 146710726 -103977128 + L1MEc LINE L1 588 785 -5611 1590 226 89 103 chr2 146710743 146710943 -103976911 + L1M4 LINE L1 3806 4007 -2139 1760 162 7 14 chr2 146710943 146711239 -103976615 + AluSx SINE Alu 1 294 -18 1590 226 89 103 chr2 146711239 146711532 -103976322 + L1M4 LINE L1 4007 4303 -1843 268 143 0 0 chr2 146711532 146711574 -103976280 + AluSc SINE Alu 1 42 -260 1702 90 9 0 chr2 146711574 146711797 -103976057 + AluSc SINE Alu 73 297 -12 1590 226 89 103 chr2 146711797 146712285 -103975569 + L1M4 LINE L1 4301 4815 -1331 563 290 62 70 chr2 146712880 146713139 -103974715 - MIR SINE MIR -2 260 4 360 0 0 0 chr2 146713183 146713223 -103974631 + (CA)n Simple_repeat Simple_repeat 1 40 0 303 122 0 0 chr2 146713576 146713625 -103974229 + (TCCC)n Simple_repeat Simple_repeat 1 49 0 1854 160 44 41 chr2 146713625 146713988 -103973866 + THE1B LTR MaLR 1 364 0 10765 113 15 8 chr2 146713988 146715558 -103972296 + THE1B-int LTR MaLR 1 1580 0 1768 182 36 30 chr2 146715558 146715920 -103971934 + THE1B LTR MaLR 1 364 0 242 200 20 0 chr2 146716309 146716359 -103971495 + MIR SINE MIR 89 139 -69 26 0 0 0 chr2 146716359 146716385 -103971469 + AT_rich Low_complexity Low_complexity 1 26 0 2302 66 0 7 chr2 146716385 146716674 -103971180 - AluY SINE Alu -24 287 1 705 202 31 0 chr2 146717058 146717187 -103970667 + FLAM_C SINE Alu 1 133 0 190 263 13 40 chr2 146718532 146718608 -103969246 - L2 LINE L2 -86 3227 3154 1229 239 127 50 chr2 146718681 146719200 -103968654 - MER101B LTR ERV1 0 570 12 461 316 49 39 chr2 146719272 146719557 -103968297 - L2 LINE L2 -189 3124 2837 2000 139 0 7 chr2 146719869 146720178 -103967676 + AluSc SINE Alu 3 309 0 328 20 41 0 chr2 146720182 146720231 -103967623 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 703 338 23 25 chr2 146721209 146721608 -103966246 + L1PA12 LINE L1 17 414 -7167 2744 261 45 19 chr2 146722130 146723128 -103964726 + L1PA12 LINE L1 2156 3194 -4390 5091 145 20 5 chr2 146723128 146723323 -103964531 + L1PA16 LINE L1 4949 5139 -1027 1733 138 50 56 chr2 146723323 146723700 -103964154 + THE1C LTR MaLR 1 375 0 5091 145 20 5 chr2 146723700 146724694 -103963160 + L1PA16 LINE L1 5139 6150 -16 329 329 37 22 chr2 146727580 146727716 -103960138 - MIR SINE MIR -59 149 11 260 271 12 0 chr2 146729239 146729324 -103958530 + (TAGA)n Simple_repeat Simple_repeat 1 86 0 2120 81 0 0 chr2 146730628 146730901 -103956953 - AluY SINE Alu -2 309 37 234 341 0 0 chr2 146732967 146733049 -103954805 + MLT1-int LTR MaLR 1032 1113 -258 458 245 7 0 chr2 146733399 146733550 -103954304 + CT-rich Low_complexity Low_complexity 2 153 0 405 194 10 31 chr2 146734591 146734689 -103953165 - L1ME LINE L1 -357 5813 5718 271 260 23 22 chr2 146734775 146734877 -103952977 - L1ME LINE L1 -610 5574 5472 298 203 72 0 chr2 146734995 146735064 -103952790 - L1ME LINE L1 -960 5186 5113 1828 175 56 28 chr2 146735073 146735601 -103952253 + MLT2A2 LTR ERVL 1 554 0 238 241 17 0 chr2 146735935 146735993 -103951861 - L1 LINE L1 -2739 3407 3349 * 671 297 139 61 chr2 146735992 146736567 -103951287 - L1ME LINE L1 -5448 622 3 8788 192 47 8 chr2 146737811 146738312 -103949542 - L1MA9 LINE L1 -3 6309 5829 443 48 16 0 chr2 146738312 146738374 -103949480 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 8788 192 47 8 chr2 146738374 146740662 -103947192 - L1MA9 LINE L1 -483 5829 3414 39 50 0 0 chr2 146741387 146741447 -103946407 + AT_rich Low_complexity Low_complexity 1 60 0 322 286 55 0 chr2 146742090 146742181 -103945673 + MER5B DNA MER1_type 49 144 -34 399 269 0 10 chr2 146742663 146742767 -103945087 - MLT1H LTR MaLR -384 165 63 1899 136 0 4 chr2 146742767 146743061 -103944793 + AluSx SINE Alu 15 307 0 218 200 0 0 chr2 146744430 146744475 -103943379 + (CATAA)n Simple_repeat Simple_repeat 3 47 0 304 105 66 0 chr2 146745205 146745281 -103942573 + (TA)n Simple_repeat Simple_repeat 1 81 0 1903 213 44 33 chr2 146745345 146745895 -103941959 + LTR38 LTR ERV1 1 556 0 3237 157 75 27 chr2 146746734 146747360 -103940494 + MER50 LTR ERV1 1 656 -78 444 149 0 23 chr2 146747363 146747450 -103940404 + ERVL LTR ERVL 5495 5579 -185 7285 198 51 19 chr2 146747464 146749021 -103938833 - ERVL-C2 LTR ERVL -282 5482 3877 2356 220 14 86 chr2 146749075 146749788 -103938066 + LTR8 LTR ERV1 30 691 0 14057 241 47 30 chr2 146749788 146750330 -103937524 - ERVL-C2 LTR ERVL -1883 3881 3349 1962 133 0 14 chr2 146750330 146750612 -103937242 + AluSg SINE Alu 1 300 -10 228 54 27 0 chr2 146750612 146750649 -103937205 + (CAA)n Simple_repeat Simple_repeat 1 180 0 1962 133 0 14 chr2 146750649 146750660 -103937194 + AluSg SINE Alu 300 310 0 14057 241 47 30 chr2 146750660 146752256 -103935598 - ERVL-C2 LTR ERVL -2415 3349 1781 247 242 0 0 chr2 146752256 146752318 -103935536 + L1MA4A LINE L1 6208 6269 -34 14057 241 47 30 chr2 146752318 146753852 -103934002 - ERVL-C2 LTR ERVL -3983 1781 16 1612 241 59 5 chr2 146753865 146754305 -103933549 - MLT2C2 LTR ERVL 0 464 1 361 285 8 16 chr2 146755595 146755718 -103932136 + (TA)n Simple_repeat Simple_repeat 1 122 0 895 211 138 84 chr2 146756821 146757177 -103930677 + THE1C LTR MaLR 1 375 0 8367 169 7 40 chr2 146757179 146758810 -103929044 + MSTA-int LTR MaLR 3 1580 0 1649 139 174 16 chr2 146758810 146759178 -103928676 + MSTA LTR MaLR 1 426 -2 555 250 32 0 chr2 146759279 146759403 -103928451 + FLAM_C SINE Alu 1 128 -5 216 138 46 0 chr2 146759833 146759898 -103927956 + (TCTA)n Simple_repeat Simple_repeat 4 71 0 259 298 111 87 chr2 146759908 146760033 -103927821 + L2 LINE L2 2825 2946 -367 2031 147 0 0 chr2 146760033 146760326 -103927528 - AluSx SINE Alu -16 296 4 259 298 111 87 chr2 146760326 146760452 -103927402 + L2 LINE L2 2946 3082 -231 1551 201 4 4 chr2 146760580 146760853 -103927001 - AluJb SINE Alu -27 285 13 1032 243 48 13 chr2 146760866 146761365 -103926489 + L1ME1 LINE L1 5054 5574 -592 548 272 84 29 chr2 146761365 146761674 -103926180 + L1ME1 LINE L1 5837 6162 -4 342 335 12 12 chr2 146761717 146761878 -103925976 + A-rich Low_complexity Low_complexity 4 164 0 1712 201 0 7 chr2 146761910 146762214 -103925640 - AluJb SINE Alu -10 302 1 2246 216 60 33 chr2 146762307 146762905 -103924949 - MER90 LTR ERV1 0 614 1 324 276 89 25 chr2 146763852 146764055 -103923799 + L1M4 LINE L1 2337 2552 -3594 1834 264 39 52 chr2 146764176 146764770 -103923084 + MLT1E LTR MaLR 3 588 -5 721 247 25 100 chr2 146764779 146765006 -103922848 + MLT1E-int LTR MaLR 1 243 -1128 1720 181 7 10 chr2 146765006 146765304 -103922550 - AluJo SINE Alu -15 297 1 721 247 25 100 chr2 146765304 146765607 -103922247 + MLT1E-int LTR MaLR 243 607 -764 636 253 43 166 chr2 146765808 146766497 -103921357 + MLT1E-int LTR MaLR 692 1285 -86 6843 66 6 2 chr2 146766497 146767853 -103920001 - L1PA7 LINE L1 -16 6138 4779 636 253 43 166 chr2 146767853 146767903 -103919951 + MLT1E-int LTR MaLR 1285 1340 -31 1625 277 89 28 chr2 146767931 146768473 -103919381 + MLT1E LTR MaLR 3 577 -16 2486 86 3 0 chr2 146768757 146769095 -103918759 + L1PA6 LINE L1 5816 6154 0 2310 68 0 7 chr2 146769098 146769391 -103918463 + AluY SINE Alu 21 311 0 8482 244 81 43 chr2 146769396 146772220 -103915634 + L1M2 LINE L1 2202 5187 -1125 2319 95 0 0 chr2 146772220 146772514 -103915340 + AluSg1 SINE Alu 4 297 -12 8482 244 81 43 chr2 146772514 146772984 -103914870 + L1M2 LINE L1 5187 5638 -674 306 50 0 0 chr2 146773005 146773045 -103914809 + (TA)n Simple_repeat Simple_repeat 2 41 0 20308 70 3 1 chr2 146773273 146775978 -103911876 + L1P LINE L1 2342 5053 -1093 493 230 44 0 chr2 146776104 146776239 -103911615 + L1MA9 LINE L1 4573 4713 -1433 247 303 0 0 chr2 146776239 146776305 -103911549 + (TA)n Simple_repeat Simple_repeat 2 67 0 2958 178 54 20 chr2 146776324 146776931 -103910923 + L1MA9 LINE L1 5660 6287 -25 272 288 0 0 chr2 146776943 146777009 -103910845 - MER46C DNA MER2_type -201 137 72 204 40 0 0 chr2 146778405 146778430 -103909424 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 194 292 0 0 chr2 146780650 146780698 -103907156 + MER5B DNA MER1_type 2 49 -129 2127 125 3 0 chr2 146780935 146781238 -103906616 - AluSp SINE Alu -9 304 1 356 330 158 10 chr2 146781519 146781728 -103906126 - MIR SINE MIR 0 262 23 183 129 0 0 chr2 146785374 146785405 -103902449 + (TG)n Simple_repeat Simple_repeat 2 32 0 23 0 0 0 chr2 146785916 146785939 -103901915 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr2 146787268 146787299 -103900555 + AT_rich Low_complexity Low_complexity 1 31 0 450 268 71 45 chr2 146788594 146788655 -103899199 - MIR SINE MIR -21 241 183 2640 116 39 10 chr2 146788655 146789069 -103898785 - MSTA LTR MaLR -2 426 1 450 268 71 45 chr2 146789069 146789209 -103898645 - MIR SINE MIR -79 183 36 1454 186 32 18 chr2 146789400 146789680 -103898174 - AluJo SINE Alu -24 288 5 293 295 83 60 chr2 146791243 146791460 -103896394 - Charlie8 DNA MER1_type -2156 261 40 201 167 0 0 chr2 146792152 146792188 -103895666 + A-rich Low_complexity Low_complexity 1 36 0 1788 171 7 7 chr2 146793293 146793602 -103894252 + AluJb SINE Alu 2 310 -2 23 0 0 0 chr2 146794738 146794761 -103893093 + AT_rich Low_complexity Low_complexity 1 23 0 1188 136 22 0 chr2 146794780 146794964 -103892890 - MER30 DNA MER1_type -1 229 42 389 301 49 88 chr2 146795535 146795841 -103892013 - MLT1I LTR MaLR -26 383 90 1675 173 89 3 chr2 146796466 146796825 -103891029 - MLT1B LTR MaLR 0 390 1 22 35 0 0 chr2 146796862 146796891 -103890963 + AT_rich Low_complexity Low_complexity 1 29 0 230 323 158 39 chr2 146797023 146797308 -103890546 + L2 LINE L2 2995 3313 0 506 223 5 136 chr2 146799696 146799880 -103887974 + MER5A DNA MER1_type 9 168 -21 3046 88 12 0 chr2 146801002 146801423 -103886431 + L1PA8 LINE L1 5747 6172 0 180 308 92 50 chr2 146801644 146801764 -103886090 - MIR SINE MIR -65 143 19 1912 150 0 3 chr2 146802161 146802468 -103885386 - AluSx SINE Alu -6 306 1 23 0 0 0 chr2 146802480 146802503 -103885351 + AT_rich Low_complexity Low_complexity 1 23 0 254 241 11 0 chr2 146802586 146802673 -103885181 + (TA)n Simple_repeat Simple_repeat 2 89 0 21 57 0 0 chr2 146804703 146804738 -103883116 + AT_rich Low_complexity Low_complexity 1 35 0 53 40 0 0 chr2 146804804 146804878 -103882976 + AT_rich Low_complexity Low_complexity 1 74 0 182 304 0 128 chr2 146805655 146805757 -103882097 - MIR SINE MIR -70 138 50 24 0 0 0 chr2 146806933 146806957 -103880897 + AT_rich Low_complexity Low_complexity 1 24 0 1982 109 26 23 chr2 146807022 146807324 -103880530 + AluSc SINE Alu 1 303 -6 219 69 0 0 chr2 146809279 146809308 -103878546 + (TG)n Simple_repeat Simple_repeat 2 30 0 2586 209 54 19 chr2 146809907 146810102 -103877752 - L1MD2 LINE L1 -8 6351 6164 186 103 0 0 chr2 146810102 146810131 -103877723 + (TG)n Simple_repeat Simple_repeat 2 30 0 2586 209 54 19 chr2 146810131 146810551 -103877303 - L1MD2 LINE L1 -195 6164 5715 1996 243 72 16 chr2 146810551 146811657 -103876197 - L1MDa LINE L1 -3287 3253 2085 1228 278 78 27 chr2 146811658 146812068 -103875786 - L1MDa LINE L1 -5970 573 143 2090 250 82 24 chr2 146812526 146813809 -103874045 + L1ME3 LINE L1 4662 6032 -130 218 273 72 36 chr2 146814092 146814231 -103873623 + MIR SINE MIR 75 218 -44 1103 227 95 117 chr2 146814616 146815352 -103872502 - LTR8A LTR ERV1 -7 720 1 756 272 34 36 chr2 146815481 146815896 -103871958 - THE1B-int LTR MaLR -163 1417 1004 772 184 71 6 chr2 146816411 146816579 -103871275 + MER3 DNA MER1_type 29 207 -2 243 0 0 0 chr2 146816843 146816870 -103870984 + (ATG)n Simple_repeat Simple_repeat 2 28 0 1917 133 14 0 chr2 146816884 146817163 -103870691 - AluSc SINE Alu -26 283 1 28 0 0 0 chr2 146817172 146817200 -103870654 + AT_rich Low_complexity Low_complexity 1 28 0 8938 112 40 38 chr2 146817359 146818771 -103869083 - THE1B-int LTR MaLR -165 1415 2 2083 160 25 6 chr2 146818774 146819131 -103868723 - THE1B LTR MaLR 0 364 1 25 51 0 0 chr2 146819748 146819787 -103868067 + AT_rich Low_complexity Low_complexity 1 39 0 338 231 0 0 chr2 146819888 146819953 -103867901 - MLT1I LTR MaLR 0 409 345 266 329 59 18 chr2 146820438 146820608 -103867246 - MLT1I LTR MaLR -224 185 9 199 296 28 0 chr2 146820701 146820772 -103867082 - MIR SINE MIR -78 130 58 1654 161 3 18 chr2 146821096 146821381 -103866473 + AluJo SINE Alu 1 281 -31 405 58 0 0 chr2 146821381 146821433 -103866421 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 226 147 0 0 chr2 146821433 146821467 -103866387 + (A)n Simple_repeat Simple_repeat 1 34 0 22 56 0 0 chr2 146821549 146821585 -103866269 + AT_rich Low_complexity Low_complexity 1 36 0 276 91 0 0 chr2 146822529 146822573 -103865281 + (TG)n Simple_repeat Simple_repeat 2 45 0 1638 174 28 51 chr2 146822865 146823255 -103864599 + MLT1B LTR MaLR 9 389 -1 604 188 19 52 chr2 146824038 146824192 -103863662 - MER45R DNA AcHobo 0 1581 1433 1363 188 4 52 chr2 146824195 146824467 -103863387 + AluJo SINE Alu 3 261 -51 218 92 10 102 chr2 146824482 146824678 -103863176 + (TA)n Simple_repeat Simple_repeat 2 179 0 4352 192 53 61 chr2 146824730 146825935 -103861919 - MER45R DNA AcHobo -144 1437 243 829 294 61 71 chr2 146826082 146826182 -103861672 + L2 LINE L2 1932 2031 -1283 1644 110 5 0 chr2 146826182 146826401 -103861453 - AluSp SINE Alu -57 256 37 829 294 61 71 chr2 146826401 146826711 -103861143 + L2 LINE L2 2031 2338 -976 289 235 71 130 chr2 146826759 146826997 -103860857 + L2 LINE L2 3077 3300 -13 185 297 62 55 chr2 146827051 146827149 -103860705 + L2 LINE L2 2553 2654 -660 2430 56 0 13 chr2 146827149 146827455 -103860399 - AluY SINE Alu -6 305 4 185 297 62 55 chr2 146827455 146827484 -103860370 + L2 LINE L2 2654 2681 -633 617 182 30 36 chr2 146827496 146827663 -103860191 + MER31B LTR ERV1 1 278 -188 498 114 13 0 chr2 146828132 146828211 -103859643 - MADE1 DNA Mariner 0 80 1 635 330 78 44 chr2 146828368 146828802 -103859052 - L2 LINE L2 -49 3264 2816 208 220 0 40 chr2 146829272 146829322 -103858532 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 21 0 0 0 chr2 146829477 146829498 -103858356 + AT_rich Low_complexity Low_complexity 1 21 0 13309 82 5 8 chr2 146833617 146835508 -103852346 - L1P LINE L1 -2169 3977 2094 6903 60 9 0 chr2 146835508 146836707 -103851147 + L1PA6 LINE L1 4941 6147 -7 23 33 0 0 chr2 146836719 146836749 -103851105 + AT_rich Low_complexity Low_complexity 1 30 0 243 61 0 0 chr2 146837037 146837070 -103850784 + (TG)n Simple_repeat Simple_repeat 2 34 0 389 105 0 0 chr2 146837532 146837589 -103850265 - MLT2B1 LTR ERVL 0 520 464 26 0 0 0 chr2 146837591 146837617 -103850237 + AT_rich Low_complexity Low_complexity 1 26 0 286 180 22 67 chr2 146837727 146837816 -103850038 - L1MC4 LINE L1 -1339 6703 6619 1612 214 80 34 chr2 146837826 146838237 -103849617 - MLT2B1 LTR ERVL -90 430 1 1092 51 14 0 chr2 146838585 146838723 -103849131 - AluY SINE Alu -2 309 170 215 359 0 0 chr2 146839771 146839849 -103848005 + MIR SINE MIR 112 189 -73 583 263 56 114 chr2 146839893 146839956 -103847898 - L1M4 LINE L1 -1778 4368 4303 2048 124 10 0 chr2 146839956 146840247 -103847607 - AluSx SINE Alu -18 294 1 583 263 56 114 chr2 146840247 146840969 -103846885 - L1M4 LINE L1 -1843 4303 3629 306 237 169 24 chr2 146840949 146841198 -103846656 - L1MDa LINE L1 -4237 2159 1875 * 892 125 24 65 chr2 146841200 146841368 -103846486 - MLT2A2 LTR ERVL 0 453 293 694 297 78 40 chr2 146841427 146842011 -103845843 - L1MDa LINE L1 -4475 1740 1146 342 0 0 0 chr2 146842015 146842053 -103845801 + (TG)n Simple_repeat Simple_repeat 2 39 0 763 324 59 49 chr2 146842102 146843065 -103844789 - L1MDa LINE L1 -5288 1108 136 234 138 46 31 chr2 146843713 146843778 -103844076 - MER65A LTR ERV1 0 445 380 230 378 78 25 chr2 146844011 146844215 -103843639 - L2 LINE L2 -43 3229 3015 225 0 0 0 chr2 146845013 146845038 -103842816 + (TG)n Simple_repeat Simple_repeat 2 26 0 204 97 0 0 chr2 146845305 146845336 -103842518 + (TG)n Simple_repeat Simple_repeat 2 32 0 2125 248 47 68 chr2 146845424 146845579 -103842275 + L1ME1 LINE L1 4901 5058 -1108 1868 170 22 25 chr2 146845579 146845944 -103841910 + THE1B LTR MaLR 1 364 0 11172 98 14 1 chr2 146845944 146847503 -103840351 + THE1B-int LTR MaLR 1 1580 0 1966 127 83 9 chr2 146847504 146847842 -103840012 + THE1B LTR MaLR 2 364 0 2125 248 47 68 chr2 146847842 146848413 -103839441 + L1ME1 LINE L1 5057 5595 -571 2388 75 0 0 chr2 146848413 146848705 -103839149 - AluY SINE Alu -19 292 1 2125 248 47 68 chr2 146848705 146849265 -103838589 + L1ME1 LINE L1 5595 6165 -1 6609 142 9 13 chr2 146849435 146850854 -103837000 - L1MA3 LINE L1 0 6305 4891 4428 219 43 14 chr2 146850877 146851987 -103835867 - L1MC3 LINE L1 -6 8197 7121 3609 132 36 48 chr2 146851987 146852648 -103835206 - MER39B LTR ERV1 0 653 1 4428 219 43 14 chr2 146852648 146854217 -103833637 - L1MC3 LINE L1 -1082 7121 5430 228 224 237 13 chr2 146854217 146854293 -103833561 + MER39B LTR ERV1 1 93 -560 * 2030 228 37 7 chr2 146854268 146854703 -103833151 + MER39 LTR ERV1 260 707 0 1193 40 0 28 chr2 146854758 146854934 -103832920 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 2950 255 112 25 chr2 146854948 146856244 -103831610 - L1MC3 LINE L1 -1199 5365 3958 698 67 67 0 chr2 146856298 146856403 -103831451 - AluYb8 SINE Alu -4 314 203 920 266 86 5 chr2 146856531 146856937 -103830917 - L1M4 LINE L1 -2168 3978 3540 3361 231 55 16 chr2 146856942 146856989 -103830865 - L1MC3 LINE L1 -4849 1196 1152 2155 98 29 0 chr2 146856989 146857295 -103830559 - AluYb8 SINE Alu -3 315 1 3361 231 55 16 chr2 146857295 146858520 -103829334 - L1MC3 LINE L1 -4893 1152 214 23 33 0 0 chr2 146859668 146859698 -103828156 + AT_rich Low_complexity Low_complexity 1 30 0 1983 140 7 10 chr2 146859770 146860077 -103827777 - AluSq SINE Alu -7 306 1 1412 191 31 44 chr2 146860206 146860499 -103827355 + AluJb SINE Alu 1 289 -23 646 264 175 48 chr2 146860667 146861186 -103826668 - MER34C LTR ERV1 0 585 1 204 107 18 36 chr2 146861261 146861317 -103826537 + (TA)n Simple_repeat Simple_repeat 2 56 0 207 69 0 0 chr2 146861322 146861351 -103826503 + (TG)n Simple_repeat Simple_repeat 2 30 0 6640 115 17 29 chr2 146861403 146862676 -103825178 + L1MA2 LINE L1 5047 6304 0 29 0 0 0 chr2 146864302 146864331 -103823523 + AT_rich Low_complexity Low_complexity 1 29 0 973 7 30 7 chr2 146864789 146864924 -103822930 + (TCTA)n Simple_repeat Simple_repeat 1 138 0 3476 176 40 6 chr2 146864927 146865579 -103822275 + MER39 LTR ERV1 1 674 -33 269 247 0 0 chr2 146865587 146865676 -103822178 - L1MC4 LINE L1 -1339 6703 6615 2246 129 254 48 chr2 146866003 146866460 -103821394 + MER39 LTR ERV1 5 609 -98 1992 91 0 102 chr2 146866460 146866802 -103821052 + AluSx SINE Alu 1 307 -5 2246 129 254 48 chr2 146866802 146866927 -103820927 + MER39 LTR ERV1 609 707 0 216 0 0 0 chr2 146867118 146867142 -103820712 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 220 358 0 15 chr2 146867485 146867552 -103820302 + MIR SINE MIR 29 94 -168 296 331 78 21 chr2 146868480 146868622 -103819232 + L2 LINE L2 3146 3295 -18 205 152 0 0 chr2 146873136 146873169 -103814685 + (TG)n Simple_repeat Simple_repeat 2 34 0 189 0 0 0 chr2 146873971 146873992 -103813862 + (T)n Simple_repeat Simple_repeat 1 21 0 250 222 12 12 chr2 146874137 146874218 -103813636 + GA-rich Low_complexity Low_complexity 4 84 0 198 0 0 0 chr2 146875294 146875316 -103812538 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 578 270 124 96 chr2 146876294 146877058 -103810796 + LTR50 LTR ERVL 1 786 -9 814 154 8 0 chr2 146877514 146877644 -103810210 - FLAM_C SINE Alu -12 131 1 383 309 77 48 chr2 146877790 146877997 -103809857 + L1MEd LINE L1 921 1133 -5283 572 323 81 65 chr2 146878237 146878960 -103808894 + L1MEd LINE L1 1171 1965 -4642 1549 198 79 79 chr2 146879156 146879461 -103808393 + MLT2B1 LTR ERVL 9 316 -204 2556 36 0 0 chr2 146879461 146879762 -103808092 + AluY SINE Alu 1 301 -10 1549 198 79 79 chr2 146879762 146879927 -103807927 + MLT2B1 LTR ERVL 315 479 -41 214 250 0 0 chr2 146879937 146879993 -103807861 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 2845 201 32 15 chr2 146880025 146880717 -103807137 + Tigger7 DNA MER2_type 1 2587 0 305 287 49 28 chr2 146880825 146880968 -103806886 + L1MEd LINE L1 2316 2461 -3965 831 300 132 26 chr2 146880977 146882609 -103805245 + L1MEd LINE L1 2518 4321 -2105 232 152 30 30 chr2 146882923 146883171 -103804683 + CT-rich Low_complexity Low_complexity 1 180 0 2158 95 13 3 chr2 146883171 146883476 -103804378 - AluSg SINE Alu 0 556 1 266 316 58 5 chr2 146883679 146883869 -103803985 + L1ME3A LINE L1 5752 5951 -219 525 320 36 40 chr2 146884148 146884370 -103803484 + LTR16C LTR ERVL 89 309 -182 410 251 79 24 chr2 146884440 146884566 -103803288 + MLT1H LTR MaLR 15 187 -362 2059 137 76 105 chr2 146884675 146885121 -103802733 - Tigger2 DNA MER2_type -1 2717 1 247 314 17 17 chr2 146887461 146887579 -103800275 + MER117 DNA MER1_type 74 191 -6 193 279 39 58 chr2 146888010 146888114 -103799740 - L3 LINE CR1 -567 1010 909 214 301 163 7 chr2 146888182 146888335 -103799519 - MIR SINE MIR 0 262 86 243 0 0 0 chr2 146889127 146889154 -103798700 + (CA)n Simple_repeat Simple_repeat 1 27 0 393 319 42 14 chr2 146889191 146889335 -103798519 - L3 LINE CR1 -1068 509 362 198 337 92 0 chr2 146890427 146890525 -103797329 - MIR SINE MIR -106 156 50 2618 113 8 0 chr2 146891381 146891753 -103796101 + THE1C LTR MaLR 1 375 0 42 65 0 0 chr2 146892153 146892230 -103795624 + AT_rich Low_complexity Low_complexity 1 77 0 363 192 23 31 chr2 146894653 146894783 -103793071 + (TA)n Simple_repeat Simple_repeat 2 130 0 21 36 0 0 chr2 146894896 146894924 -103792930 + AT_rich Low_complexity Low_complexity 1 28 0 327 136 0 0 chr2 146895289 146895348 -103792506 + (TG)n Simple_repeat Simple_repeat 2 60 0 1407 189 39 25 chr2 146895805 146896115 -103791739 + AluJb SINE Alu 1 314 0 235 317 52 31 chr2 146896600 146896925 -103790929 + L1MEd LINE L1 1158 1489 -4927 411 306 96 73 chr2 146896952 146897362 -103790492 + L1MEd LINE L1 1358 2022 -765 278 213 21 21 chr2 146897819 146897913 -103789941 + (TA)n Simple_repeat Simple_repeat 1 94 0 468 328 55 17 chr2 146897913 146898203 -103789651 - L1MCc LINE L1 -4397 2725 2425 720 280 99 17 chr2 146898514 146899228 -103788626 - L1MCc LINE L1 -4723 2399 1423 375 23 0 0 chr2 146899278 146899322 -103788532 + (TG)n Simple_repeat Simple_repeat 1 44 0 478 322 40 0 chr2 146899326 146899478 -103788376 - L1MCc LINE L1 -5095 1328 1171 202 209 0 0 chr2 146899478 146899521 -103788333 + CT-rich Low_complexity Low_complexity 1 43 0 26 74 0 0 chr2 146899662 146899716 -103788138 + AT_rich Low_complexity Low_complexity 1 54 0 1581 171 7 39 chr2 146899906 146900215 -103787639 - AluSx SINE Alu -13 299 1 181 333 37 56 chr2 146900250 146900358 -103787496 - MIR SINE MIR -137 125 20 697 230 69 0 chr2 146900368 146900542 -103787312 + MER5A DNA MER1_type 1 186 -3 246 288 25 51 chr2 146900985 146901103 -103786751 + MIR SINE MIR 56 170 -92 23 0 0 0 chr2 146901244 146901267 -103786587 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 146902283 146902309 -103785545 + AT_rich Low_complexity Low_complexity 1 26 0 1986 141 49 0 chr2 146903072 146903399 -103784455 + MER7A DNA MER2_type 5 345 -1 25 0 0 0 chr2 146903938 146903963 -103783891 + AT_rich Low_complexity Low_complexity 1 25 0 464 318 61 87 chr2 146903965 146904424 -103783430 - L2 LINE L2 -2 3270 2824 21 36 0 0 chr2 146904550 146904578 -103783276 + AT_rich Low_complexity Low_complexity 1 28 0 213 353 59 0 chr2 146907276 146907378 -103780476 - MIR SINE MIR -98 164 57 947 264 127 26 chr2 146907415 146907657 -103780197 + MLT1C LTR MaLR 1 217 -250 2934 168 32 73 chr2 146907657 146908378 -103779476 + LTR8 LTR ERV1 1 691 0 947 264 127 26 chr2 146908378 146908559 -103779295 + MLT1C LTR MaLR 217 467 0 4074 216 35 33 chr2 146909096 146911182 -103776672 - L1MB8 LINE L1 -3 6986 4879 5443 181 13 13 chr2 146911206 146913044 -103774810 - L1PA16 LINE L1 0 6166 4330 2819 253 85 22 chr2 146913040 146914285 -103773569 - L1MB8 LINE L1 -2082 4875 3552 * 1438 263 64 49 chr2 146914290 146914724 -103773130 - L1MB8 LINE L1 -3486 3471 3045 1512 135 0 5 chr2 146914724 146914946 -103772908 - AluSg/x SINE Alu -10 302 82 1438 263 64 49 chr2 146914946 146915489 -103772365 - L1MB8 LINE L1 -3912 3045 2515 21 0 0 0 chr2 146915631 146915652 -103772202 + AT_rich Low_complexity Low_complexity 1 21 0 4428 251 48 84 chr2 146915726 146918045 -103769809 - L1MB8 LINE L1 -4543 2416 198 4549 40 25 0 chr2 146918045 146918614 -103769240 - L1PA5 LINE L1 -12 6142 5560 4428 251 48 84 chr2 146918614 146918796 -103769058 - L1MB8 LINE L1 -6761 198 11 1920 165 93 10 chr2 146918887 146919286 -103768568 + MSTB1 LTR MaLR 1 432 0 22 35 0 0 chr2 146919749 146919778 -103768076 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr2 146919971 146920004 -103767850 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr2 146920154 146920183 -103767671 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr2 146920591 146920626 -103767228 + AT_rich Low_complexity Low_complexity 1 35 0 208 244 0 0 chr2 146921929 146921974 -103765880 + (CATA)n Simple_repeat Simple_repeat 1 45 0 23 0 0 0 chr2 146922790 146922813 -103765041 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 146923063 146923087 -103764767 + AT_rich Low_complexity Low_complexity 1 24 0 243 0 0 0 chr2 146923274 146923301 -103764553 + (CA)n Simple_repeat Simple_repeat 2 28 0 203 277 0 45 chr2 146925165 146925277 -103762577 + (TATATG)n Simple_repeat Simple_repeat 6 112 0 279 54 0 0 chr2 146926245 146926282 -103761572 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 534 307 93 50 chr2 146927232 146927747 -103760107 + L1ME3A LINE L1 1527 2063 -4333 2290 206 101 91 chr2 146927761 146928605 -103759249 + Charlie1a DNA MER1_type 7 858 -597 555 316 96 37 chr2 146928605 146929253 -103758601 + L1ME3A LINE L1 3752 4437 -1778 28 29 0 0 chr2 146929332 146929367 -103758487 + AT_rich Low_complexity Low_complexity 1 35 0 601 255 79 36 chr2 146929434 146929929 -103757925 + L1ME3A LINE L1 4994 5509 -724 2105 106 3 7 chr2 146929929 146930232 -103757622 + AluSx SINE Alu 1 302 -10 210 118 0 0 chr2 146930277 146930311 -103757543 + (T)n Simple_repeat Simple_repeat 1 34 0 278 237 75 21 chr2 146930384 146930477 -103757377 + L1ME3A LINE L1 5703 5800 -439 773 258 84 20 chr2 146930518 146930817 -103757037 + L1ME3A LINE L1 5910 6227 -12 304 288 12 0 chr2 146930979 146931059 -103756795 + MLT1H LTR MaLR 243 323 -226 932 250 107 14 chr2 146931208 146931572 -103756282 + L1ME1 LINE L1 5764 6161 -5 306 318 50 0 chr2 146931710 146931825 -103756029 - MIR SINE MIR -63 145 54 37 23 0 0 chr2 146932696 146932740 -103755114 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 146934087 146934109 -103753745 + AT_rich Low_complexity Low_complexity 1 22 0 1913 147 42 34 chr2 146935013 146935395 -103752459 - L1MB2 LINE L1 0 6171 5787 23 33 0 0 chr2 146937233 146937263 -103750591 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr2 146938053 146938076 -103749778 + (A)n Simple_repeat Simple_repeat 1 23 0 230 368 68 0 chr2 146938816 146938949 -103748905 - MIR SINE MIR -114 148 7 35 24 0 0 chr2 146939047 146939089 -103748765 + AT_rich Low_complexity Low_complexity 1 42 0 263 272 109 15 chr2 146939186 146939386 -103748468 - L1ME LINE L1 -569 5552 5327 209 105 0 26 chr2 146939750 146939788 -103748066 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 24 32 0 0 chr2 146939960 146939991 -103747863 + AT_rich Low_complexity Low_complexity 1 31 0 186 143 0 0 chr2 146940135 146940170 -103747684 + (TTA)n Simple_repeat Simple_repeat 1 35 0 1742 144 153 16 chr2 146940934 146941254 -103746600 + THE1B LTR MaLR 1 364 0 3903 183 29 64 chr2 146941285 146942522 -103745332 - L1MA9 LINE L1 -67 6245 5048 1237 325 49 45 chr2 146942523 146943651 -103744203 + L1ME LINE L1 32 1163 -5233 775 236 43 43 chr2 146943642 146943947 -103743907 + L1ME LINE L1 4770 5074 -1141 * 1167 225 60 15 chr2 146943953 146944287 -103743567 + L1MB7 LINE L1 5654 6002 -176 510 241 35 7 chr2 146944288 146944433 -103743421 + L1MB7 LINE L1 6036 6184 0 3352 179 78 6 chr2 146944437 146945107 -103742747 + L1MC1 LINE L1 5616 6333 0 391 258 25 30 chr2 146945117 146945315 -103742539 + L1ME LINE L1 5050 5246 -969 1766 177 0 33 chr2 146945338 146945643 -103742211 + AluJb SINE Alu 1 295 -17 349 115 49 16 chr2 146945662 146945723 -103742131 - L1MC1 LINE L1 -238 6095 6033 21 36 0 0 chr2 146945747 146945775 -103742079 + AT_rich Low_complexity Low_complexity 1 28 0 286 288 0 0 chr2 146945928 146946008 -103741846 + L1ME LINE L1 5414 5493 -669 282 288 0 0 chr2 146946052 146946132 -103741722 + L1ME LINE L1 5414 5493 -671 311 271 0 41 chr2 146946610 146946732 -103741122 + L1ME LINE L1 5446 5562 -669 282 288 0 0 chr2 146946776 146946856 -103740998 + L1ME LINE L1 5414 5493 -669 485 264 174 50 chr2 146947331 146947573 -103740281 - MLT1I LTR MaLR -137 272 1 21 36 0 0 chr2 146949431 146949459 -103738395 + AT_rich Low_complexity Low_complexity 1 28 0 2747 298 31 5 chr2 146950459 146951233 -103736621 + L1M3c LINE L1 9 802 -5339 1194 192 48 44 chr2 146951234 146951759 -103736095 + pTR5 LTR ERV1 743 1344 -1094 2789 214 19 59 chr2 146951762 146951775 -103736079 + L1M3c LINE L1 832 844 -5297 3572 97 158 112 chr2 146951775 146952561 -103735293 + LTR12 LTR ERV1 5 826 0 2789 214 19 59 chr2 146952561 146953360 -103734494 + L1M3c LINE L1 844 1612 -4529 11150 143 30 27 chr2 146953375 146955360 -103732494 + L1PB1 LINE L1 6 1996 -4867 365 215 32 0 chr2 146955342 146955435 -103732419 + L1PB1 LINE L1 4253 4348 -2514 * 480 186 21 10 chr2 146955436 146955533 -103732321 + MER4A LTR ERV1 1 98 -566 1650 153 17 24 chr2 146955583 146955878 -103731976 + MER4A LTR ERV1 372 664 0 7542 179 25 9 chr2 146955878 146957893 -103729961 + L1PB1 LINE L1 4349 6396 -471 1696 163 52 7 chr2 146957893 146958182 -103729672 + AluSx SINE Alu 1 302 -10 7542 179 25 9 chr2 146958182 146958661 -103729193 + L1PB1 LINE L1 6396 6866 -1 1198 278 32 93 chr2 146958662 146959787 -103728067 + L1M2 LINE L1 1386 2449 -3933 2130 129 0 7 chr2 146959789 146960092 -103727762 + AluSg SINE Alu 1 301 -9 14584 122 11 16 chr2 146960100 146962381 -103725473 + L1P LINE L1 11 2281 -3865 207 175 32 32 chr2 146962509 146962572 -103725282 + CT-rich Low_complexity Low_complexity 2 64 0 23 0 0 0 chr2 146963575 146963598 -103724256 + AT_rich Low_complexity Low_complexity 1 23 0 328 250 18 22 chr2 146963848 146963962 -103723892 + L1MC4 LINE L1 6614 6703 -1339 648 262 29 35 chr2 146964409 146964581 -103723273 - MER5B DNA MER1_type -7 171 1 24 32 0 0 chr2 146965016 146965047 -103722807 + AT_rich Low_complexity Low_complexity 1 31 0 627 216 98 7 chr2 146965167 146965320 -103722534 + MER20 DNA MER1_type 50 216 -3 1881 320 65 34 chr2 146965402 146969182 -103718672 + HERV16 LTR ERVL 317 4395 -1259 294 298 16 32 chr2 146969447 146969571 -103718283 + HERV16 LTR ERVL 4735 4856 -798 700 170 106 0 chr2 146969571 146969712 -103718142 + MER3 DNA MER1_type 1 156 -53 1903 169 80 20 chr2 146969947 146970349 -103717505 - MSTA LTR MaLR 0 428 3 22 35 0 0 chr2 146971422 146971451 -103716403 + AT_rich Low_complexity Low_complexity 1 29 0 50 0 0 0 chr2 146972299 146972349 -103715505 + AT_rich Low_complexity Low_complexity 1 50 0 3643 126 118 122 chr2 146972545 146973917 -103713937 + pTR5 LTR ERV1 743 2426 -12 276 252 0 58 chr2 146973917 146974078 -103713776 + MLT1A1 LTR MaLR 49 196 -169 * 786 227 21 21 chr2 146974076 146974270 -103713584 + MLT1A1 LTR MaLR 168 361 -4 227 318 57 0 chr2 146974337 146974425 -103713429 - LTR33A LTR ERVL -127 396 304 208 121 0 0 chr2 146974556 146974589 -103713265 + (CAA)n Simple_repeat Simple_repeat 2 34 0 281 300 33 0 chr2 146974595 146974685 -103713169 - LTR33 LTR ERVL -428 93 1 21 36 0 0 chr2 146974784 146974812 -103713042 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr2 146975095 146975115 -103712739 + (CA)n Simple_repeat Simple_repeat 2 21 0 317 175 52 103 chr2 146975186 146975283 -103712571 + MER39B LTR ERV1 1 92 -561 * 2006 187 65 7 chr2 146975255 146975667 -103712187 + MER39 LTR ERV1 256 691 -16 205 322 70 26 chr2 146976291 146976406 -103711448 + L2 LINE L2 2712 2831 -483 324 299 30 102 chr2 146977038 146977205 -103710649 + L2 LINE L2 3097 3251 -21 693 231 116 20 chr2 146980195 146980394 -103707460 - MER20 DNA MER1_type -1 218 1 858 265 153 43 chr2 146981690 146982225 -103705629 + MLT1G1 LTR MaLR 2 595 0 24 0 0 0 chr2 146982622 146982646 -103705208 + AT_rich Low_complexity Low_complexity 1 24 0 422 206 24 129 chr2 146983449 146983619 -103704235 - MIR SINE MIR -1 261 110 790 278 106 61 chr2 146985633 146986123 -103701731 + MLT1H LTR MaLR 38 549 0 535 299 65 14 chr2 146986198 146986415 -103701439 - MIR SINE MIR -32 230 3 1188 209 40 80 chr2 146988005 146988378 -103699476 - MLT1A2 LTR MaLR -16 358 1 23 33 0 0 chr2 146989455 146989485 -103698369 + AT_rich Low_complexity Low_complexity 1 30 0 24 77 0 0 chr2 146989912 146989964 -103697890 + AT_rich Low_complexity Low_complexity 1 52 0 506 310 44 0 chr2 146990822 146990980 -103696874 - MIR3 SINE MIR -9 199 35 573 313 216 8 chr2 146990995 146991379 -103696475 - L2 LINE L2 -1053 2261 1798 192 375 0 14 chr2 146992949 146993021 -103694833 + MIR SINE MIR 48 118 -90 23 54 0 0 chr2 146994681 146994718 -103693136 + AT_rich Low_complexity Low_complexity 1 37 0 2246 95 10 0 chr2 146994833 146995128 -103692726 + AluSp SINE Alu 1 298 -15 2064 81 7 42 chr2 146995221 146995543 -103692311 - AluSg SINE Alu 0 319 8 225 94 0 0 chr2 146995616 146995648 -103692206 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 844 301 103 28 chr2 146995651 146996087 -103691767 - L2 LINE L2 -18 3295 2827 24 0 0 0 chr2 146996924 146996948 -103690906 + AT_rich Low_complexity Low_complexity 1 24 0 4266 92 15 40 chr2 146998852 146998971 -103688883 - MER41B LTR ERV1 0 635 515 2192 123 3 0 chr2 146998971 146999281 -103688573 + AluY SINE Alu 1 311 0 4266 92 15 40 chr2 146999281 146999812 -103688042 - MER41B LTR ERV1 -120 515 1 1504 164 16 56 chr2 146999921 147000226 -103687628 - AluJb SINE Alu -19 293 1 632 258 6 39 chr2 147000360 147000542 -103687312 + MER5B DNA MER1_type 1 176 -2 26 0 0 0 chr2 147000946 147000972 -103686882 + AT_rich Low_complexity Low_complexity 1 26 0 261 382 27 48 chr2 147001339 147001525 -103686329 + MIR3 SINE MIR 15 196 -12 208 313 0 0 chr2 147003295 147003375 -103684479 + (CATATA)n Simple_repeat Simple_repeat 5 84 0 227 79 26 0 chr2 147003390 147003428 -103684426 + (TA)n Simple_repeat Simple_repeat 2 40 0 539 343 78 0 chr2 147005001 147005246 -103682608 + L1MC/D LINE L1 5456 5719 -2089 208 392 25 38 chr2 147007180 147007338 -103680516 + MIR3 SINE MIR 15 170 -38 180 282 0 0 chr2 147009496 147009535 -103678319 + MIR3 SINE MIR 138 176 -32 1612 216 89 46 chr2 147009833 147010272 -103677582 - MLT2B1 LTR ERVL -2 518 61 504 182 73 0 chr2 147010292 147010402 -103677452 - MLT2B2 LTR ERVL -397 118 1 285 292 90 38 chr2 147010631 147010764 -103677090 - MIR3 SINE MIR -73 135 13 24 0 0 0 chr2 147013713 147013737 -103674117 + AT_rich Low_complexity Low_complexity 1 24 0 2482 66 0 0 chr2 147013868 147014172 -103673682 + AluY SINE Alu 1 304 -7 231 61 0 0 chr2 147014349 147014382 -103673472 + (TG)n Simple_repeat Simple_repeat 2 34 0 640 285 186 16 chr2 147014512 147014898 -103672956 - L1MC4 LINE L1 -290 7752 7301 235 143 0 0 chr2 147014963 147015005 -103672849 - L1ME LINE L1 -423 5739 5698 339 317 60 11 chr2 147015120 147015303 -103672551 - MLT1L LTR MaLR 0 615 424 270 0 0 0 chr2 147015380 147015410 -103672444 + (TG)n Simple_repeat Simple_repeat 1 30 0 206 154 0 26 chr2 147016407 147016446 -103671408 + GA-rich Low_complexity Low_complexity 2 39 0 23 0 0 0 chr2 147017252 147017275 -103670579 + AT_rich Low_complexity Low_complexity 1 23 0 21 71 0 0 chr2 147017706 147017748 -103670106 + AT_rich Low_complexity Low_complexity 1 42 0 273 305 124 9 chr2 147017914 147018019 -103669835 - L2 LINE L2 -8 3305 3189 3654 162 30 47 chr2 147018209 147018601 -103669253 + L1MA5A LINE L1 5446 5818 -479 1450 196 11 7 chr2 147018601 147018887 -103668967 + AluJo SINE Alu 11 297 -15 3654 162 30 47 chr2 147018887 147019297 -103668557 + L1MA5A LINE L1 5818 6234 -63 26 0 0 0 chr2 147019301 147019327 -103668527 + AT_rich Low_complexity Low_complexity 1 26 0 516 249 109 0 chr2 147019753 147019918 -103667936 + L2 LINE L2 3126 3308 -5 232 325 167 17 chr2 147020658 147020748 -103667106 + L2 LINE L2 3133 3247 -25 1946 101 6 76 chr2 147020748 147021065 -103666789 + AluSx SINE Alu 1 295 -17 232 325 167 17 chr2 147021065 147021094 -103666760 + L2 LINE L2 3247 3270 -2 1081 276 75 27 chr2 147021307 147021934 -103665920 - L1MCc LINE L1 -4167 2955 2299 469 101 38 44 chr2 147022043 147022201 -103665653 + (TATAA)n Simple_repeat Simple_repeat 3 159 0 440 131 71 12 chr2 147022255 147022423 -103665431 + (TTATA)n Simple_repeat Simple_repeat 1 178 0 1207 248 16 82 chr2 147022498 147023074 -103664780 - L1MCc LINE L1 -5028 1913 1376 679 289 148 21 chr2 147023116 147023448 -103664406 - L1MCc LINE L1 -5130 1293 920 447 308 36 36 chr2 147023852 147024233 -103663621 - L1MCc LINE L1 -5685 737 19 2358 73 0 10 chr2 147024431 147024732 -103663122 - AluY SINE Alu -13 298 1 1650 159 0 18 chr2 147024799 147025082 -103662772 - AluJb SINE Alu -9 303 26 932 152 0 6 chr2 147026532 147026703 -103661151 + GA-rich Low_complexity Low_complexity 2 171 0 2027 135 0 3 chr2 147027929 147028240 -103659614 + AluSx SINE Alu 1 310 -2 23 39 0 39 chr2 147028748 147028774 -103659080 + AT_rich Low_complexity Low_complexity 1 26 -24 2448 162 19 7 chr2 147028774 147029193 -103658661 + MSTB LTR MaLR 1 424 -2 23 39 0 39 chr2 147029193 147029218 -103658636 + AT_rich Low_complexity Low_complexity 26 50 0 560 250 7 0 chr2 147030255 147030391 -103657463 - MER104 DNA Tc2 -4 176 40 273 75 0 0 chr2 147031423 147031463 -103656391 + (TG)n Simple_repeat Simple_repeat 2 41 0 667 286 27 45 chr2 147031667 147031887 -103655967 - MIR SINE MIR -19 243 28 234 327 99 8 chr2 147032065 147032237 -103655617 - MIR SINE MIR -11 251 20 1141 269 97 41 chr2 147032648 147032839 -103655015 - L2 LINE L2 -1 3312 3133 981 226 42 9 chr2 147032839 147033056 -103654798 - MER58A DNA MER1_type 0 224 1 1141 269 97 41 chr2 147033056 147033673 -103654181 - L2 LINE L2 -180 3133 2428 347 309 64 54 chr2 147033965 147034169 -103653685 + MIR SINE MIR 57 262 0 905 186 11 4 chr2 147034497 147034943 -103652911 + GA-rich Low_complexity Low_complexity 1 448 0 24 0 0 0 chr2 147035544 147035568 -103652286 + AT_rich Low_complexity Low_complexity 1 24 0 3458 121 0 15 chr2 147035915 147036437 -103651417 + MER75 DNA T2_type 1 514 0 21 0 0 0 chr2 147037602 147037623 -103650231 + AT_rich Low_complexity Low_complexity 1 21 0 505 150 20 0 chr2 147038184 147038284 -103649570 + CT-rich Low_complexity Low_complexity 2 103 0 256 187 27 13 chr2 147042931 147043006 -103644848 + (TA)n Simple_repeat Simple_repeat 2 77 0 231 88 0 0 chr2 147043006 147043040 -103644814 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 863 249 169 117 chr2 147045832 147046506 -103641348 - MER21B LTR ERV1 -149 714 6 199 297 54 14 chr2 147047401 147047475 -103640379 - MIR SINE MIR -78 130 54 230 95 24 0 chr2 147047858 147047900 -103639954 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 942 188 10 43 chr2 147048930 147049138 -103638716 - MER20 DNA MER1_type -3 216 16 196 399 49 14 chr2 147050246 147050389 -103637465 + MIR SINE MIR 23 170 -92 2428 62 0 7 chr2 147050609 147050916 -103636938 - AluY SINE Alu -6 305 1 26 50 0 0 chr2 147050984 147051024 -103636830 + AT_rich Low_complexity Low_complexity 1 40 0 1598 165 133 3 chr2 147051859 147052175 -103635679 + MLT2C1 LTR ERVL 1 357 -40 225 232 0 14 chr2 147052175 147052244 -103635610 - L1MC4 LINE L1 -1351 6691 6624 22 0 0 0 chr2 147052374 147052396 -103635458 + AT_rich Low_complexity Low_complexity 1 22 0 353 281 14 36 chr2 147054306 147054445 -103633409 - MER5A DNA MER1_type -22 167 32 186 186 102 0 chr2 147054613 147054672 -103633182 - MIR SINE MIR -72 190 126 379 139 13 13 chr2 147054754 147054833 -103633021 + CT-rich Low_complexity Low_complexity 2 80 0 1803 166 0 25 chr2 147054836 147055150 -103632704 - AluJo SINE Alu -1 311 6 222 205 0 0 chr2 147055225 147055264 -103632590 + (TG)n Simple_repeat Simple_repeat 2 40 0 1789 256 59 24 chr2 147055295 147055841 -103632013 - MLT1E2 LTR MaLR -2 624 60 2228 219 51 21 chr2 147055972 147056505 -103631349 + MER44D DNA MER2_type 1 604 -1 22 35 0 0 chr2 147056715 147056744 -103631110 + AT_rich Low_complexity Low_complexity 1 29 0 186 43 0 0 chr2 147059493 147059516 -103628338 + (TA)n Simple_repeat Simple_repeat 2 24 0 794 205 0 13 chr2 147059564 147059715 -103628139 + FRAM SINE Alu 1 149 -27 255 157 0 0 chr2 147060042 147060093 -103627761 + (TA)n Simple_repeat Simple_repeat 1 51 0 418 255 9 9 chr2 147060255 147060361 -103627493 - MIR SINE MIR -70 192 87 25 75 0 0 chr2 147062244 147062297 -103625557 + AT_rich Low_complexity Low_complexity 1 53 0 669 177 23 51 chr2 147063055 147063270 -103624584 - MER69 DNA AcHobo -9 2517 2309 358 221 82 0 chr2 147063295 147063417 -103624437 - MER69 DNA AcHobo -334 2192 2061 1553 291 51 31 chr2 147063420 147063969 -103623885 - MER69 DNA AcHobo -1966 560 1 24400 72 12 1 chr2 147065595 147069660 -103618194 - L1PA6 LINE L1 -7 6147 2040 22 35 0 0 chr2 147070579 147070608 -103617246 + AT_rich Low_complexity Low_complexity 1 29 0 1629 210 10 0 chr2 147070888 147071197 -103616657 - AluJb SINE Alu 0 312 1 398 254 127 86 chr2 147072103 147072347 -103615507 + MIR SINE MIR 9 262 0 2029 126 27 7 chr2 147072651 147072944 -103614910 + AluSq SINE Alu 1 299 -14 194 269 164 0 chr2 147073321 147073388 -103614466 - L2 LINE L2 0 3272 3195 252 59 0 0 chr2 147073748 147073782 -103614072 + (T)n Simple_repeat Simple_repeat 1 34 0 406 312 77 0 chr2 147075719 147075889 -103611965 + L3b LINE CR1 1131 1313 -270 1473 167 212 19 chr2 147076414 147076773 -103611081 + MSTA LTR MaLR 1 428 0 386 340 60 30 chr2 147077505 147077870 -103609984 + L1ME LINE L1 412 787 -5283 215 289 69 67 chr2 147078062 147078209 -103609645 + MIR SINE MIR 41 189 -66 28 29 0 0 chr2 147079790 147079825 -103608029 + AT_rich Low_complexity Low_complexity 1 35 0 410 361 36 12 chr2 147081001 147081167 -103606687 - MIR SINE MIR -68 194 25 1476 165 31 133 chr2 147081249 147081942 -103605912 + MER4A LTR ERV1 1 465 0 237 336 43 14 chr2 147083055 147083195 -103604659 - HAL1 LINE L1 -859 1648 1505 22 0 0 0 chr2 147083200 147083222 -103604632 + AT_rich Low_complexity Low_complexity 1 22 0 285 283 43 0 chr2 147083254 147083346 -103604508 - HAL1 LINE L1 -1109 1398 1303 26 0 0 0 chr2 147083821 147083847 -103604007 + AT_rich Low_complexity Low_complexity 1 26 0 317 315 22 55 chr2 147084283 147084464 -103603390 - HAL1b LINE L1 -414 934 760 1954 142 16 7 chr2 147084762 147085071 -103602783 - AluSx SINE Alu 0 312 1 202 365 74 41 chr2 147085285 147085529 -103602325 + L2 LINE L2 2199 2450 -864 187 306 0 0 chr2 147085628 147085677 -103602177 + L2 LINE L2 2594 2642 -672 698 175 0 0 chr2 147085789 147085903 -103601951 - FLAM_C SINE Alu -24 119 6 520 335 11 0 chr2 147086024 147086203 -103601651 - MIR SINE MIR 0 262 82 418 316 111 0 chr2 147088911 147089082 -103598772 + MIR SINE MIR 54 243 -19 2038 166 18 29 chr2 147089493 147089878 -103597976 - LTR8 LTR ERV1 0 691 311 2122 191 0 13 chr2 147089954 147090331 -103597523 - HUERS-P1 LTR ERV1 -5891 372 1 3102 182 12 72 chr2 147090331 147091066 -103596788 - LTR8 LTR ERV1 0 691 1 187 385 61 7 chr2 147092960 147093108 -103594746 - L2 LINE L2 -1 3271 3116 2579 61 0 0 chr2 147093635 147093946 -103593908 + AluY SINE Alu 1 311 0 186 43 0 0 chr2 147095231 147095254 -103592600 + (CA)n Simple_repeat Simple_repeat 2 24 0 240 261 127 91 chr2 147095420 147095585 -103592269 + MIR SINE MIR 79 249 -13 958 176 0 0 chr2 147095656 147095809 -103592045 + AluJb SINE Alu 152 304 -8 968 237 116 45 chr2 147096272 147096609 -103591245 + MLT1A1 LTR MaLR 5 365 0 1459 78 5 26 chr2 147097147 147097340 -103590514 + AluY SINE Alu 1 189 -122 360 292 125 24 chr2 147097452 147097620 -103590234 + MIR SINE MIR 78 262 0 2063 99 6 43 chr2 147097763 147098085 -103589769 - AluSx SINE Alu -2 310 1 486 248 18 18 chr2 147099237 147099350 -103588504 - MER81 DNA DNA 0 114 2 355 311 0 0 chr2 147099404 147099510 -103588344 + MLT1F1 LTR MaLR 1 106 -461 651 238 0 0 chr2 147100678 147100850 -103587004 + (TA)n Simple_repeat Simple_repeat 1 172 0 695 256 35 13 chr2 147101135 147101365 -103586489 + MER106A DNA MER1_type 1 235 -1 819 296 56 29 chr2 147102965 147103627 -103584227 + L1MEc LINE L1 919 1598 -4828 2598 274 46 22 chr2 147103644 147104972 -103582882 + L1MA9 LINE L1 239 1521 -4906 1099 205 8 4 chr2 147104972 147105206 -103582648 + MER46A DNA MER2_type 1 235 -1 2598 274 46 22 chr2 147105206 147105953 -103581901 + L1MA9 LINE L1 1521 2248 -4179 11518 213 39 27 chr2 147105955 147106953 -103580901 + L1MA9 LINE L1 2194 3178 -3414 204 40 0 0 chr2 147106953 147106978 -103580876 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 11518 213 39 27 chr2 147106978 147107025 -103580829 + L1MA9 LINE L1 3178 3223 -3369 1963 159 3 3 chr2 147107025 147107333 -103580521 + AluSx SINE Alu 1 308 -4 11518 213 39 27 chr2 147107333 147110127 -103577727 + L1MA9 LINE L1 3223 5982 -610 252 59 0 0 chr2 147110127 147110161 -103577693 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 11518 213 39 27 chr2 147110161 147110190 -103577664 + L1MA9 LINE L1 5982 6009 -583 207 0 0 0 chr2 147110190 147110213 -103577641 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 11518 213 39 27 chr2 147110213 147110676 -103577178 + L1MA9 LINE L1 6009 6587 -5 483 312 63 11 chr2 147110681 147111043 -103576811 + L1MEc LINE L1 1787 2167 -4440 841 151 0 0 chr2 147111272 147111391 -103576463 - AluSq/x SINE Alu -194 119 1 258 136 0 0 chr2 147111404 147111448 -103576406 + (T)n Simple_repeat Simple_repeat 1 44 0 2019 136 10 0 chr2 147111450 147111760 -103576094 - AluSp SINE Alu 0 313 1 288 360 63 0 chr2 147112077 147112188 -103575666 + L2 LINE L2 3150 3267 -5 180 218 35 0 chr2 147112199 147112286 -103575568 + GA-rich Low_complexity Low_complexity 3 92 0 1614 326 115 22 chr2 147113068 147114081 -103573773 - L2 LINE L2 -94 3219 2095 267 104 30 15 chr2 147114574 147114641 -103573213 + (TAGA)n Simple_repeat Simple_repeat 3 70 0 23 33 0 0 chr2 147114965 147114995 -103572859 + AT_rich Low_complexity Low_complexity 1 30 0 182 300 56 33 chr2 147116866 147116956 -103570898 + MIR3 SINE MIR 112 203 -5 181 262 0 0 chr2 147120546 147120588 -103567266 - L3 LINE CR1 -3 1574 1533 391 253 182 7 chr2 147122006 147122092 -103565762 + MIR SINE MIR 45 115 -147 224 57 0 29 chr2 147122092 147122127 -103565727 + (TA)n Simple_repeat Simple_repeat 2 35 0 2036 130 7 3 chr2 147122132 147122432 -103565422 - AluSq SINE Alu -12 301 1 391 253 182 7 chr2 147122432 147122525 -103565329 + MIR SINE MIR 118 262 0 422 340 25 15 chr2 147122662 147122859 -103564995 + MLT1K LTR MaLR 79 277 -311 424 270 138 15 chr2 147123234 147123430 -103564424 + MLT1K LTR MaLR 369 588 0 380 251 197 49 chr2 147123591 147123774 -103564080 + MIR SINE MIR 50 259 -3 29 0 0 0 chr2 147123836 147123865 -103563989 + AT_rich Low_complexity Low_complexity 1 29 0 309 51 0 0 chr2 147127639 147127678 -103560176 + (CA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr2 147127749 147127770 -103560084 + AT_rich Low_complexity Low_complexity 1 21 0 274 322 35 35 chr2 147128583 147128698 -103559156 - MIR SINE MIR -110 152 38 26 30 0 0 chr2 147129082 147129115 -103558739 + AT_rich Low_complexity Low_complexity 1 33 0 202 337 30 30 chr2 147129620 147129721 -103558133 + MER5B DNA MER1_type 78 178 0 21 0 0 0 chr2 147129768 147129789 -103558065 + AT_rich Low_complexity Low_complexity 1 21 0 338 289 0 0 chr2 147129991 147130067 -103557787 + L2 LINE L2 3186 3261 -11 506 284 82 16 chr2 147130872 147131055 -103556799 + MIR SINE MIR 58 252 -10 1560 181 26 16 chr2 147131550 147131853 -103556001 - AluJb SINE Alu -6 306 1 25 0 0 0 chr2 147132086 147132111 -103555743 + AT_rich Low_complexity Low_complexity 1 25 0 621 216 37 25 chr2 147134358 147134520 -103553334 + MER20 DNA MER1_type 56 219 0 946 266 25 5 chr2 147136343 147136576 -103551278 + MIR SINE MIR 6 235 -27 424 320 110 33 chr2 147137835 147138200 -103549654 + L2 LINE L2 2186 2578 -736 900 328 70 12 chr2 147138202 147138632 -103549222 - LTR33 LTR ERVL -1 520 66 286 307 29 57 chr2 147138637 147138777 -103549077 + L2 LINE L2 2603 2738 -576 312 289 158 0 chr2 147138867 147138981 -103548873 + L2 LINE L2 3141 3272 0 199 107 0 0 chr2 147139002 147139030 -103548824 - MER5B DNA MER1_type -126 52 25 24 85 0 0 chr2 147139733 147139792 -103548062 + AT_rich Low_complexity Low_complexity 1 59 0 236 279 0 0 chr2 147139890 147139958 -103547896 + (TA)n Simple_repeat Simple_repeat 2 69 0 22 56 0 0 chr2 147141044 147141080 -103546774 + AT_rich Low_complexity Low_complexity 1 36 0 296 267 109 10 chr2 147143637 147143738 -103544116 - MIR SINE MIR 0 262 152 1822 174 93 13 chr2 147143738 147144378 -103543476 - LTR8A LTR ERV1 0 727 1 402 191 36 64 chr2 147144378 147144488 -103543366 - MIR SINE MIR -107 155 49 23 78 0 0 chr2 147144720 147144771 -103543083 + AT_rich Low_complexity Low_complexity 1 51 0 31 0 0 0 chr2 147145429 147145460 -103542394 + AT_rich Low_complexity Low_complexity 1 31 0 3168 253 124 61 chr2 147145751 147147525 -103540329 - L1MEc LINE L1 -4466 1930 45 270 261 25 109 chr2 147147554 147147673 -103540181 - MIR SINE MIR -13 249 141 235 270 14 14 chr2 147147674 147147748 -103540106 + MLT1L LTR MaLR 3 76 -539 36583 96 12 8 chr2 147148174 147153448 -103534406 + L1P LINE L1 11 5305 -841 215 261 15 0 chr2 147203691 147203756 -103484098 + (TA)n Simple_repeat Simple_repeat 2 67 0 1703 230 50 19 chr2 147204657 147205118 -103482736 - MLT1D LTR MaLR -30 475 1 266 356 111 22 chr2 147205156 147205524 -103482330 + L2 LINE L2 1720 2120 -1194 280 306 20 20 chr2 147205760 147205858 -103481996 - MIR SINE MIR -70 192 95 259 246 0 0 chr2 147206327 147206388 -103481466 + L1MB7 LINE L1 4683 4743 -1403 1969 255 46 12 chr2 147206389 147207350 -103480504 + L1MB7 LINE L1 4713 5702 -482 35 24 0 0 chr2 147207509 147207551 -103480303 + AT_rich Low_complexity Low_complexity 1 42 0 383 270 80 45 chr2 147209116 147209316 -103478538 + L1MB7 LINE L1 5953 6159 -25 618 14 0 0 chr2 147209338 147209409 -103478445 + (GGAA)n Simple_repeat Simple_repeat 1 71 0 512 251 126 0 chr2 147209422 147209629 -103478225 + L1ME1 LINE L1 2323 2555 -3591 2392 184 19 7 chr2 147209629 147210090 -103477764 - MLT1C LTR MaLR 0 467 1 2011 241 68 30 chr2 147210143 147210927 -103476927 + L1ME1 LINE L1 5086 5904 -262 509 138 12 0 chr2 147211051 147211131 -103476723 - AluS SINE Alu -228 85 5 267 196 0 0 chr2 147211156 147211207 -103476647 - MLT1J1 LTR MaLR -323 123 73 1738 235 47 16 chr2 147211229 147211719 -103476135 - MLT1D LTR MaLR 0 505 1 428 354 105 17 chr2 147211757 147212110 -103475744 + L2 LINE L2 1720 2103 -1211 450 255 0 0 chr2 147212359 147212457 -103475397 - MIR SINE MIR -70 192 95 189 171 0 0 chr2 147212634 147212669 -103475185 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 360 317 17 17 chr2 147213096 147213276 -103474578 + CT-rich Low_complexity Low_complexity 1 180 0 2232 104 0 3 chr2 147213832 147214139 -103473715 - AluSx SINE Alu -6 306 1 554 232 110 7 chr2 147214555 147214710 -103473144 - MLT1J2 LTR MaLR -279 171 1 275 405 97 17 chr2 147214811 147215246 -103472608 + L2 LINE L2 2560 3029 -243 182 340 106 32 chr2 147215361 147215455 -103472399 + L2 LINE L2 3142 3242 -30 1993 151 48 8 chr2 147216011 147216363 -103471491 + Tigger2 DNA MER2_type 2350 2715 -3 2043 122 3 3 chr2 147216468 147216763 -103471091 + AluSx SINE Alu 1 295 -17 255 325 8 42 chr2 147217212 147217332 -103470522 - MER117 DNA MER1_type -37 160 45 244 272 43 65 chr2 147217475 147217567 -103470287 - MIR SINE MIR -102 160 71 331 250 156 0 chr2 147217573 147217669 -103470185 + L2 LINE L2 3203 3313 0 1111 141 0 27 chr2 147217776 147217960 -103469894 - AluSg/x SINE Alu 0 310 132 702 329 108 19 chr2 147218161 147218589 -103469265 - L2 LINE L2 -9 3304 2839 2124 131 48 14 chr2 147219103 147219454 -103468400 + THE1B LTR MaLR 2 364 0 2050 124 0 0 chr2 147219908 147220198 -103467656 - AluSx SINE Alu -22 290 1 237 163 20 0 chr2 147222185 147222234 -103465620 + (TG)n Simple_repeat Simple_repeat 1 50 0 21 36 0 0 chr2 147222530 147222558 -103465296 + AT_rich Low_complexity Low_complexity 1 28 0 371 320 111 35 chr2 147224042 147224472 -103463382 - L2 LINE L2 0 3313 2707 * 521 309 26 110 chr2 147224467 147224739 -103463115 + L2 LINE L2 2980 3228 -44 700 325 180 16 chr2 147225592 147226097 -103461757 - L2 LINE L2 -661 2653 2066 288 154 0 0 chr2 147226800 147226852 -103461002 + (TATG)n Simple_repeat Simple_repeat 2 53 0 398 197 31 0 chr2 147226962 147227089 -103460765 + (TA)n Simple_repeat Simple_repeat 2 132 0 227 208 91 13 chr2 147227098 147227175 -103460679 + L1MC4 LINE L1 6617 6699 -1343 308 306 83 0 chr2 147227323 147227431 -103460423 + MIR SINE MIR 29 145 -63 342 162 0 0 chr2 147228626 147228700 -103459154 + (TA)n Simple_repeat Simple_repeat 1 74 0 412 296 23 23 chr2 147228896 147229028 -103458826 - MIR3 SINE MIR -34 174 43 221 191 88 29 chr2 147229005 147229073 -103458781 + L2 LINE L2 2732 2803 -511 * 881 314 65 42 chr2 147229074 147229402 -103458452 - LTR33 LTR ERVL -1 520 201 1081 67 17 22 chr2 147229402 147229581 -103458273 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 881 314 65 42 chr2 147229581 147229612 -103458242 - LTR33 LTR ERVL -320 201 172 537 16 0 0 chr2 147229612 147229674 -103458180 + (TTTC)n Simple_repeat Simple_repeat 4 65 0 881 314 65 42 chr2 147229674 147229807 -103458047 - LTR33 LTR ERVL -349 172 16 39 38 0 0 chr2 147232073 147232126 -103455728 + AT_rich Low_complexity Low_complexity 1 53 0 318 208 45 112 chr2 147232456 147232634 -103455220 - MER103 DNA DNA 0 166 1 353 344 48 55 chr2 147232958 147233269 -103454585 - L3b LINE CR1 -47 1536 1228 220 313 60 12 chr2 147233595 147233678 -103454176 + L2 LINE L2 2943 3029 -243 359 155 0 14 chr2 147234087 147234158 -103453696 + GA-rich Low_complexity Low_complexity 2 71 0 307 236 0 0 chr2 147235060 147235115 -103452739 - L2 LINE L2 -14 3299 3245 2260 290 71 51 chr2 147235239 147236626 -103451228 + L2 LINE L2 1901 3313 0 23 0 0 0 chr2 147237553 147237576 -103450278 + AT_rich Low_complexity Low_complexity 1 23 0 183 129 0 0 chr2 147237795 147237826 -103450028 + (TAGA)n Simple_repeat Simple_repeat 1 31 0 200 243 14 0 chr2 147237933 147238007 -103449847 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 10935 79 79 3 chr2 147238131 147239708 -103448146 + L1P LINE L1 3083 4778 -1368 506 383 5 0 chr2 147240499 147240708 -103447146 - MLT1K LTR MaLR -303 285 76 475 287 12 30 chr2 147241351 147241518 -103446336 - MER112 DNA MER1_type -89 171 8 22 35 0 0 chr2 147243008 147243037 -103444817 + AT_rich Low_complexity Low_complexity 1 29 0 386 16 47 16 chr2 147243051 147243115 -103444739 + (TA)n Simple_repeat Simple_repeat 2 67 0 201 147 0 0 chr2 147245767 147245801 -103442053 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 28 29 0 0 chr2 147246555 147246590 -103441264 + AT_rich Low_complexity Low_complexity 1 35 0 259 327 88 44 chr2 147247644 147247803 -103440051 + MIR3 SINE MIR 16 181 -27 225 0 0 0 chr2 147249282 147249307 -103438547 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 297 339 73 11 chr2 147250654 147250831 -103437023 + MER5A DNA MER1_type 2 189 0 967 279 56 16 chr2 147251130 147251453 -103436401 - MER58B DNA MER1_type -1 340 5 441 305 69 0 chr2 147251468 147251599 -103436255 - MER5A DNA MER1_type -6 183 44 2161 176 5 16 chr2 147252466 147252847 -103435007 - MER89 LTR ERV1 0 559 183 186 43 0 0 chr2 147253533 147253556 -103434298 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2113 100 4 0 chr2 147253558 147253839 -103434015 - AluSp SINE Alu -31 282 1 2923 174 22 0 chr2 147254222 147254773 -103433081 + L1MB5 LINE L1 5603 6165 -9 891 202 0 12 chr2 147254779 147254947 -103432907 - AluJb SINE Alu -18 294 129 34 72 0 0 chr2 147255262 147255331 -103432523 + AT_rich Low_complexity Low_complexity 1 69 0 271 327 143 18 chr2 147255556 147255773 -103432081 + L2 LINE L2 3008 3251 -62 249 282 14 14 chr2 147256241 147256312 -103431542 - L2 LINE L2 -33 3239 3169 503 266 35 0 chr2 147256820 147256963 -103430891 - MLT1H LTR MaLR 0 549 402 378 282 36 57 chr2 147257046 147257281 -103430573 - MLT1H LTR MaLR -265 284 3 253 346 98 29 chr2 147257559 147257764 -103430090 + L3b LINE CR1 1336 1554 -29 255 174 326 0 chr2 147258439 147258525 -103429329 - L1MC5 LINE L1 -109 7852 7739 1930 278 180 20 chr2 147259518 147260474 -103427380 + L2 LINE L2 1990 3095 -218 225 77 51 0 chr2 147260483 147260522 -103427332 - AluSq SINE Alu -6 296 256 1173 114 18 0 chr2 147260522 147260689 -103427165 - AluSq SINE Alu -143 170 1 515 326 54 67 chr2 147261304 147261693 -103426161 + LTR16A LTR ERVL 52 435 -15 1215 350 39 33 chr2 147261706 147262427 -103425427 + HERV16 LTR ERVL 1 725 -4271 448 343 105 16 chr2 147262466 147262714 -103425140 + HERV16 LTR ERVL 1949 2218 -3546 251 260 65 81 chr2 147262757 147262880 -103424974 + HERV16 LTR ERVL 4064 4184 -812 653 377 62 18 chr2 147263030 147263643 -103424211 + HERV16 LTR ERVL 4741 5380 -384 843 343 18 43 chr2 147263793 147264239 -103423615 + LTR16A LTR ERVL 16 450 0 272 225 0 25 chr2 147264308 147264388 -103423466 + (TA)n Simple_repeat Simple_repeat 1 78 0 188 378 116 13 chr2 147265848 147266073 -103421781 + MIR SINE MIR 1 248 -14 913 311 56 37 chr2 147266421 147266800 -103421054 + MLT1J2 LTR MaLR 1 390 -60 1071 252 93 3 chr2 147266800 147267113 -103420741 - MER58B DNA MER1_type 0 341 1 913 311 56 37 chr2 147267113 147267161 -103420693 + MLT1J2 LTR MaLR 390 436 -14 264 320 125 31 chr2 147267712 147267840 -103420014 + L2 LINE L2 3132 3271 -1 181 290 14 14 chr2 147269775 147269844 -103418010 + MER5B DNA MER1_type 2 70 -108 * 400 235 29 10 chr2 147269827 147269929 -103417925 - MER5A DNA MER1_type -83 106 3 235 381 88 14 chr2 147270417 147270564 -103417290 - MIR SINE MIR -84 178 21 24 0 0 0 chr2 147272574 147272598 -103415256 + AT_rich Low_complexity Low_complexity 1 24 0 1692 168 0 51 chr2 147272983 147273299 -103414555 - AluJo SINE Alu -12 300 1 381 329 176 5 chr2 147273692 147273902 -103413952 - MIR SINE MIR -5 257 12 1054 297 155 11 chr2 147274201 147274737 -103413117 + MLT2F LTR ERVL 45 657 -6 240 351 9 0 chr2 147275435 147275546 -103412308 - MER94 DNA DNA 0 134 23 402 306 72 26 chr2 147275582 147275775 -103412079 - MIR SINE MIR 0 262 61 1919 112 7 20 chr2 147275858 147276025 -103411829 + L1PA13 LINE L1 5858 6021 -142 1663 147 137 53 chr2 147276025 147276420 -103411434 + MSTA LTR MaLR 1 428 0 1919 112 7 20 chr2 147276420 147276555 -103411299 + L1PA13 LINE L1 6021 6156 -7 180 0 0 0 chr2 147276877 147276897 -103410957 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1165 199 181 3 chr2 147276972 147277254 -103410600 + MLT2C1 LTR ERVL 4 335 -62 2339 164 11 25 chr2 147277331 147277769 -103410085 - Tigger2a DNA MER2_type -2 432 1 451 322 102 37 chr2 147278099 147278344 -103409510 - MIR SINE MIR 0 262 2 202 431 16 0 chr2 147278373 147278496 -103409358 + MIR SINE MIR 16 140 -68 204 152 22 22 chr2 147280566 147280612 -103407242 + (CA)n Simple_repeat Simple_repeat 2 47 0 21 36 0 0 chr2 147281568 147281596 -103406258 + AT_rich Low_complexity Low_complexity 1 28 0 297 370 49 31 chr2 147281922 147282084 -103405770 - MIR3 SINE MIR -21 187 23 468 310 53 0 chr2 147282229 147282400 -103405454 + MIR SINE MIR 75 254 -8 581 246 0 0 chr2 147282469 147282583 -103405271 - MER58A DNA MER1_type 0 132 19 185 29 0 86 chr2 147283237 147283272 -103404582 + (A)n Simple_repeat Simple_repeat 1 32 0 492 229 56 7 chr2 147283549 147283693 -103404161 + MER97a DNA MER1_type? 28 178 -716 229 254 75 37 chr2 147283818 147283952 -103403902 + MLT1K LTR MaLR 435 573 -15 285 267 0 13 chr2 147284287 147284362 -103403492 + (TATATG)n Simple_repeat Simple_repeat 2 75 0 219 88 0 0 chr2 147284362 147284396 -103403458 + (CA)n Simple_repeat Simple_repeat 2 35 0 277 333 74 26 chr2 147285194 147285383 -103402471 - MIR SINE MIR -57 205 8 813 267 23 52 chr2 147286328 147286725 -103401129 + L1MDb LINE L1 934 1298 -5242 384 269 33 57 chr2 147286832 147287044 -103400810 + L1MDb LINE L1 1515 1721 -4819 453 305 15 0 chr2 147287048 147287248 -103400606 + L1MDb LINE L1 2519 2721 -4000 * 2344 280 29 38 chr2 147287246 147287977 -103399877 + L1M4 LINE L1 4 727 -5815 876 222 23 5 chr2 147287976 147288197 -103399657 + L1M4 LINE L1 1700 1924 -4722 * 31 0 0 0 chr2 147288205 147288236 -103399618 + AT_rich Low_complexity Low_complexity 1 31 0 1722 117 0 0 chr2 147288558 147288789 -103399065 + AluSx SINE Alu 52 282 -30 1642 188 7 3 chr2 147288996 147289376 -103398478 + AluSx SINE Alu 1 381 0 1369 31 0 0 chr2 147290188 147290350 -103397504 - L1P1 LINE L1 -610 5545 5384 2053 52 0 0 chr2 147290350 147290601 -103397253 + L1PA5 LINE L1 5903 6154 0 23 33 0 0 chr2 147290602 147290632 -103397222 + AT_rich Low_complexity Low_complexity 1 30 0 220 339 37 55 chr2 147290791 147290900 -103396954 + L2 LINE L2 3153 3259 -13 1401 271 145 19 chr2 147293587 147294285 -103393569 - LTR50 LTR ERVL -3 792 7 460 313 65 71 chr2 147294340 147294847 -103393007 - L2 LINE L2 -86 3227 2702 22 0 0 0 chr2 147295515 147295537 -103392317 + AT_rich Low_complexity Low_complexity 1 22 0 317 330 19 0 chr2 147295538 147295641 -103392213 - L2 LINE L2 -16 3297 3193 329 165 0 13 chr2 147295720 147295799 -103392055 + (TA)n Simple_repeat Simple_repeat 1 78 0 21 0 0 56 chr2 147296785 147296805 -103391049 + AT_rich Low_complexity Low_complexity 1 20 -14 813 188 0 0 chr2 147296805 147296938 -103390916 + FLAM_C SINE Alu 1 133 0 21 0 0 56 chr2 147296938 147296953 -103390901 + AT_rich Low_complexity Low_complexity 20 34 0 252 0 0 0 chr2 147297090 147297118 -103390736 + (CA)n Simple_repeat Simple_repeat 1 28 0 22 88 0 0 chr2 147298040 147298097 -103389757 + AT_rich Low_complexity Low_complexity 1 57 0 1768 176 20 8 chr2 147298456 147298814 -103389040 - MER47A DNA MER2_type -4 362 1 1983 141 7 3 chr2 147298939 147299245 -103388609 - AluSx SINE Alu -5 307 1 1327 195 24 37 chr2 147299266 147299594 -103388260 - MER33 DNA MER1_type 0 324 1 458 340 85 23 chr2 147300867 147301312 -103386542 + L2 LINE L2 2703 3171 -142 405 288 30 15 chr2 147301440 147301572 -103386282 - MIR SINE MIR -12 250 117 1575 186 3 0 chr2 147304399 147304706 -103383148 - AluSp SINE Alu 0 313 6 2115 97 3 7 chr2 147305578 147305887 -103381967 - AluSp SINE Alu 0 313 6 1342 216 43 25 chr2 147307328 147307606 -103380248 + AluJo SINE Alu 3 285 -27 27 0 0 0 chr2 147307606 147307633 -103380221 + AT_rich Low_complexity Low_complexity 1 27 0 10667 72 1 1 chr2 147308827 147310265 -103377589 - L1PA6 LINE L1 -1894 4252 2816 8289 63 7 3 chr2 147310265 147310885 -103376969 + L1PA6 LINE L1 4270 4886 -1268 2373 87 0 0 chr2 147310885 147311195 -103376659 + AluY SINE Alu 1 310 -1 8289 63 7 3 chr2 147311195 147312475 -103375379 + L1PA6 LINE L1 4886 6147 -7 296 274 27 0 chr2 147312512 147312585 -103375269 + MER63 DNA MER1_type 678 752 -309 30 45 0 0 chr2 147312687 147312731 -103375123 + AT_rich Low_complexity Low_complexity 1 44 0 25 99 0 0 chr2 147313059 147313140 -103374714 + AT_rich Low_complexity Low_complexity 1 81 0 1700 216 5 11 chr2 147313270 147313641 -103374213 - L1MB7 LINE L1 -8 6176 5808 5299 232 59 45 chr2 147313909 147315631 -103372223 - L1MB7 LINE L1 -8 7595 5898 2219 106 7 0 chr2 147315631 147315932 -103371922 - AluSg SINE Alu -7 303 1 5299 232 59 45 chr2 147315932 147316210 -103371644 - L1MB7 LINE L1 -1705 5898 5625 2111 103 0 44 chr2 147316210 147316530 -103371324 + AluSc SINE Alu 1 306 -3 5299 232 59 45 chr2 147316530 147317449 -103370405 - L1MB7 LINE L1 -1978 5625 4643 2117 268 115 27 chr2 147317458 147319137 -103368717 - L1MB7 LINE L1 -3717 3848 1929 347 257 38 56 chr2 147319326 147319577 -103368277 - L1MEc LINE L1 -4884 1357 1113 31 96 0 0 chr2 147319580 147319674 -103368180 + AT_rich Low_complexity Low_complexity 1 94 0 439 120 0 87 chr2 147319688 147319780 -103368074 - L1PA16 LINE L1 -6 6160 6077 233 261 9 26 chr2 147320541 147320656 -103367198 + A-rich Low_complexity Low_complexity 2 114 0 29 28 0 0 chr2 147321043 147321079 -103366775 + AT_rich Low_complexity Low_complexity 1 36 0 26 50 0 0 chr2 147321182 147321222 -103366632 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr2 147321333 147321354 -103366500 + AT_rich Low_complexity Low_complexity 1 21 0 268 196 0 22 chr2 147321469 147321561 -103366293 + (TA)n Simple_repeat Simple_repeat 1 90 0 233 263 59 26 chr2 147321600 147321752 -103366102 + L1M4 LINE L1 5222 5378 -768 242 199 14 135 chr2 147321948 147322089 -103365765 - LTR41 LTR ERVL -7 766 643 4130 216 19 7 chr2 147322097 147322929 -103364925 + L1MA2 LINE L1 18 859 -6706 498 165 13 0 chr2 147323091 147323170 -103364684 - L1MB7 LINE L1 -7323 242 163 842 144 72 0 chr2 147323170 147323309 -103364545 + L1MA2 LINE L1 862 1010 -6555 * 6554 144 25 5 chr2 147323306 147324846 -103363008 + L1MA2 LINE L1 6148 7719 -4 246 254 34 17 chr2 147324866 147324984 -103362870 + (TA)n Simple_repeat Simple_repeat 1 120 0 12399 30 1 15 chr2 147325282 147327573 -103360281 - L1PA4 LINE L1 -3 6152 3883 243 57 0 0 chr2 147327666 147327680 -103360174 + (TA)n Simple_repeat Simple_repeat 1 14 -21 207 69 0 0 chr2 147327680 147327709 -103360145 + (TG)n Simple_repeat Simple_repeat 2 30 0 243 57 0 0 chr2 147327709 147327729 -103360125 + (TA)n Simple_repeat Simple_repeat 13 35 0 27 29 0 0 chr2 147328040 147328074 -103359780 + AT_rich Low_complexity Low_complexity 1 34 0 269 100 20 0 chr2 147329665 147329715 -103358139 + (CAAAAA)n Simple_repeat Simple_repeat 3 53 0 228 174 0 0 chr2 147329788 147329834 -103358020 - LTR66 LTR ERVL -171 439 394 * 234 191 0 0 chr2 147329794 147329841 -103358013 + LTR66 LTR ERVL 394 440 -170 1574 158 6 64 chr2 147330333 147330662 -103357192 - AluJb SINE Alu 0 312 3 206 261 15 0 chr2 147331392 147331457 -103356397 + (TA)n Simple_repeat Simple_repeat 2 67 0 329 346 57 0 chr2 147332996 147333155 -103354699 - MIR SINE MIR -1 261 94 487 128 32 0 chr2 147333577 147333671 -103354183 + GA-rich Low_complexity Low_complexity 3 99 0 22 94 0 0 chr2 147334299 147334363 -103353491 + AT_rich Low_complexity Low_complexity 1 64 0 225 0 0 0 chr2 147334811 147334836 -103353018 + (CACTT)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr2 147335174 147335203 -103352651 + AT_rich Low_complexity Low_complexity 1 29 0 34 24 0 0 chr2 147337368 147337409 -103350445 + AT_rich Low_complexity Low_complexity 1 41 0 1487 171 20 13 chr2 147337531 147337829 -103350025 - L1MB5 LINE L1 -9 6165 5866 620 298 109 42 chr2 147338813 147339216 -103348638 - HAL1 LINE L1 -742 1765 1336 247 312 52 58 chr2 147339924 147340078 -103347776 + L2 LINE L2 2969 3121 -192 30 0 0 0 chr2 147340997 147341027 -103346827 + AT_rich Low_complexity Low_complexity 1 30 0 201 74 0 0 chr2 147341408 147341435 -103346419 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2657 23 0 0 chr2 147341493 147341792 -103346062 + AluY SINE Alu 11 309 -2 240 307 27 0 chr2 147342068 147342143 -103345711 + L1ME2 LINE L1 6069 6145 -19 21 36 0 0 chr2 147343756 147343784 -103344070 + AT_rich Low_complexity Low_complexity 1 28 0 5023 121 73 15 chr2 147344312 147345178 -103342676 - L1PB3 LINE L1 -3 6151 5228 391 329 91 24 chr2 147345393 147345603 -103342251 - MIR SINE MIR -18 244 21 270 224 0 15 chr2 147347664 147347731 -103340123 - MARNA DNA Mariner -120 466 401 281 313 99 40 chr2 147347762 147348066 -103339788 + MARNA DNA Mariner 252 573 -13 318 387 79 9 chr2 147348111 147348532 -103339322 + L2 LINE L2 2649 3096 -217 33 43 0 29 chr2 147348677 147348714 -103339140 + AT_rich Low_complexity Low_complexity 1 37 -30 2219 64 25 0 chr2 147348714 147348997 -103338857 + AluY SINE Alu 1 290 -21 33 43 0 29 chr2 147348997 147349028 -103338826 + AT_rich Low_complexity Low_complexity 37 67 0 229 226 16 16 chr2 147350471 147350533 -103337321 + GA-rich Low_complexity Low_complexity 1 62 0 818 134 0 7 chr2 147350535 147350677 -103337177 + (GGAA)n Simple_repeat Simple_repeat 2 142 0 458 262 40 8 chr2 147351646 147351772 -103336082 + MER94 DNA DNA 1 130 -4 278 295 54 27 chr2 147352085 147352197 -103335657 - L2 LINE L2 -2 3311 3197 24 0 0 0 chr2 147352449 147352473 -103335381 + AT_rich Low_complexity Low_complexity 1 24 0 532 309 47 22 chr2 147352553 147352850 -103335004 + MLT1H LTR MaLR 104 452 -97 6576 185 31 5 chr2 147352866 147354080 -103333774 + L1MA2 LINE L1 101 1346 -6219 13116 162 37 15 chr2 147354526 147356406 -103331448 + L1MA2 LINE L1 1325 3162 -4403 2204 111 7 0 chr2 147356406 147356704 -103331150 + AluSp SINE Alu 1 300 -13 13116 162 37 15 chr2 147356704 147356905 -103330949 + L1MA2 LINE L1 3162 3357 -4208 180 77 0 0 chr2 147356905 147356931 -103330923 + (TAAAA)n Simple_repeat Simple_repeat 3 28 0 13116 162 37 15 chr2 147356931 147357558 -103330296 + L1MA2 LINE L1 3357 4098 -3467 10423 154 15 3 chr2 147357554 147360562 -103327292 + L1MA2 LINE L1 4672 7723 0 * 266 297 29 0 chr2 147360595 147360733 -103327121 + (TA)n Simple_repeat Simple_repeat 1 142 0 2287 95 7 0 chr2 147360737 147361043 -103326811 - AluSx SINE Alu -4 308 1 419 359 76 20 chr2 147361771 147362219 -103325635 + L2 LINE L2 2115 2587 -727 1939 174 33 33 chr2 147362220 147362775 -103325079 - MLT2A2 LTR ERVL 0 554 1 462 380 56 0 chr2 147362778 147362994 -103324860 + L2 LINE L2 2588 2815 -499 244 287 96 54 chr2 147363087 147363254 -103324600 + L2 LINE L2 2904 3077 -195 676 216 84 5 chr2 147363348 147363538 -103324316 - MER3 DNA MER1_type -1 208 4 2093 124 0 13 chr2 147364894 147365192 -103322662 - AluSx SINE Alu -18 294 1 29 47 0 0 chr2 147365695 147365738 -103322116 + AT_rich Low_complexity Low_complexity 1 43 0 1985 128 0 10 chr2 147366171 147366508 -103321346 - AluSx SINE Alu 0 312 1 2841 111 19 5 chr2 147369470 147369901 -103317953 + L1PA10 LINE L1 5732 6168 0 236 281 16 0 chr2 147371749 147371813 -103316041 - L1ME4a LINE L1 -94 6027 5963 224 382 24 12 chr2 147371829 147371999 -103315855 + L2 LINE L2 2667 2838 -476 435 329 62 34 chr2 147372281 147372637 -103315217 - L1M4 LINE L1 -1219 4927 4562 21 36 0 0 chr2 147372819 147372847 -103315007 + AT_rich Low_complexity Low_complexity 1 28 0 225 258 15 15 chr2 147373417 147373483 -103314371 + LTR16A LTR ERVL 380 445 -5 942 287 59 41 chr2 147374618 147375291 -103312563 + HERV16 LTR ERVL 1304 2073 -2923 1118 339 52 44 chr2 147375365 147376156 -103311698 + HERV16 LTR ERVL 2247 3043 -2721 243 275 153 61 chr2 147376160 147376291 -103311563 + L2 LINE L2 3128 3270 -43 1313 263 78 67 chr2 147376294 147377024 -103310830 + MER97c DNA MER1_type? 1 738 -352 966 165 11 0 chr2 147377032 147377220 -103310634 - L1MC3 LINE L1 -92 7693 7504 229 197 70 28 chr2 147377371 147377442 -103310412 - L1MC5 LINE L1 -36 7925 7852 23 54 0 0 chr2 147377452 147377489 -103310365 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 147377617 147377638 -103310216 + AT_rich Low_complexity Low_complexity 1 21 0 1957 157 62 45 chr2 147377642 147378063 -103309791 - MSTA LTR MaLR 0 428 1 690 188 65 0 chr2 147378363 147378517 -103309337 - L1MD1 LINE L1 -6 6236 6073 452 233 107 20 chr2 147378520 147378670 -103309184 + MER97a DNA MER1_type? 727 889 -5 207 0 0 0 chr2 147379373 147379396 -103308458 + (T)n Simple_repeat Simple_repeat 1 23 0 180 294 109 0 chr2 147382473 147382565 -103305289 + L2 LINE L2 3212 3313 0 239 293 78 54 chr2 147383204 147383371 -103304483 + MIR SINE MIR 17 187 -75 30 0 0 0 chr2 147384031 147384061 -103303793 + AT_rich Low_complexity Low_complexity 1 30 0 201 200 111 0 chr2 147384550 147384595 -103303259 - L2 LINE L2 0 3313 3264 522 334 98 49 chr2 147384771 147385644 -103302210 + L2 LINE L2 2405 3313 0 342 250 0 0 chr2 147385655 147385759 -103302095 + (TGGA)n Simple_repeat Simple_repeat 1 104 0 21 0 0 0 chr2 147386670 147386691 -103301163 + AT_rich Low_complexity Low_complexity 1 21 0 407 299 95 57 chr2 147386868 147387282 -103300572 + LTR33A LTR ERVL 20 511 -10 341 333 90 11 chr2 147387320 147387497 -103300357 + MIR SINE MIR 64 254 -8 2247 89 0 26 chr2 147387764 147388068 -103299786 + AluY SINE Alu 1 296 -15 22 0 0 0 chr2 147388132 147388154 -103299700 + AT_rich Low_complexity Low_complexity 1 22 0 297 143 0 36 chr2 147390223 147390307 -103297547 + (TC)n Simple_repeat Simple_repeat 1 81 0 23 33 0 0 chr2 147390549 147390579 -103297275 + AT_rich Low_complexity Low_complexity 1 30 0 305 170 0 0 chr2 147390990 147391037 -103296817 + Tigger1 DNA MER2_type 1 47 -2371 17482 44 1 0 chr2 147391037 147393970 -103293884 - L1PA4 LINE L1 -4 6151 3215 1705 43 0 9 chr2 147393970 147394202 -103293652 + L1PA4 LINE L1 2989 3218 -2928 13781 149 26 10 chr2 147394209 147396333 -103291521 + Tigger1 DNA MER2_type 55 2220 -198 2137 119 0 25 chr2 147396333 147396652 -103291202 - AluSx SINE Alu -1 311 1 13781 149 26 10 chr2 147396652 147396855 -103290999 + Tigger1 DNA MER2_type 2220 2418 0 188 179 26 0 chr2 147398058 147398097 -103289757 + L2 LINE L2 3270 3309 -4 982 54 78 0 chr2 147398264 147398393 -103289461 - MER85 DNA T2_type 0 139 1 629 312 30 5 chr2 147400000 147400202 -103287652 + MER63A DNA MER1_type 3 209 -1 28 29 0 0 chr2 147400363 147400398 -103287456 + AT_rich Low_complexity Low_complexity 1 35 0 726 279 29 63 chr2 147400573 147400924 -103286930 + L2 LINE L2 2973 3311 -2 193 336 107 23 chr2 147400969 147401100 -103286754 + L3b LINE CR1 1373 1514 -69 432 0 0 0 chr2 147401284 147401332 -103286522 + (TG)n Simple_repeat Simple_repeat 2 49 0 1984 107 14 4 chr2 147403050 147403369 -103284485 - AluY SINE Alu 0 322 1 269 306 0 0 chr2 147403503 147403575 -103284279 - Charlie8 DNA MER1_type -989 1428 1357 651 181 60 0 chr2 147403612 147403761 -103284093 - L1MD1 LINE L1 0 6242 6085 1676 211 70 51 chr2 147403762 147403905 -103283949 - L1MD2 LINE L1 -163 6196 6057 6628 79 7 3 chr2 147403905 147404922 -103282932 + L1PA13 LINE L1 5144 6163 0 1676 211 70 51 chr2 147404922 147405252 -103282602 - L1MD2 LINE L1 -302 6057 5714 854 284 73 18 chr2 147405401 147405773 -103282081 - LTR16A LTR ERVL -7 443 59 356 309 49 8 chr2 147405841 147405964 -103281890 + L2 LINE L2 3185 3312 -1 2088 229 81 56 chr2 147406661 147407465 -103280389 + LTR1B LTR ERV1 1 824 -2 189 107 0 0 chr2 147407597 147407625 -103280229 + (T)n Simple_repeat Simple_repeat 1 28 0 208 0 0 0 chr2 147408358 147408381 -103279473 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 2097 113 3 0 chr2 147408381 147408666 -103279188 - AluSq SINE Alu -1 308 1 1021 33 0 0 chr2 147408693 147408815 -103279039 + L1PA2 LINE L1 6034 6155 0 5305 107 15 5 chr2 147409132 147409926 -103277928 - L1PA13 LINE L1 -4 6159 5358 270 95 0 0 chr2 147410129 147410171 -103277683 + (GA)n Simple_repeat Simple_repeat 1 42 0 1485 87 22 22 chr2 147412714 147412944 -103274910 - L1PA11 LINE L1 -1 6173 5944 362 197 0 15 chr2 147413441 147413507 -103274347 + AluJ/FLAM SINE Alu 1 65 -237 263 266 0 18 chr2 147413633 147413742 -103274112 + (CATATA)n Simple_repeat Simple_repeat 6 112 0 335 368 23 23 chr2 147416142 147416362 -103271492 + L2 LINE L2 2564 2783 -531 189 214 0 0 chr2 147416530 147416572 -103271282 + (CA)n Simple_repeat Simple_repeat 1 42 0 279 329 59 7 chr2 147417092 147417244 -103270610 - L3b LINE CR1 -141 1442 1283 2074 122 14 0 chr2 147417952 147418246 -103269608 - AluSg SINE Alu -12 298 1 25 31 0 0 chr2 147418317 147418349 -103269505 + AT_rich Low_complexity Low_complexity 1 32 0 410 236 45 111 chr2 147419355 147419446 -103268408 + MIR SINE MIR 77 150 -112 531 244 23 42 chr2 147419446 147419663 -103268191 + MER58C DNA MER1_type 2 214 -1 410 236 45 111 chr2 147419663 147419770 -103268084 + MIR SINE MIR 150 262 0 4475 145 88 36 chr2 147419878 147420127 -103267727 + Tigger3b DNA MER2_type 1 236 -2792 2126 120 3 0 chr2 147420127 147420419 -103267435 - AluSx SINE Alu -19 293 1 4475 145 88 36 chr2 147420419 147420822 -103267032 + Tigger3b DNA MER2_type 236 719 -2309 2019 140 76 15 chr2 147420822 147421164 -103266690 + THE1B LTR MaLR 2 364 0 4475 145 88 36 chr2 147421164 147421449 -103266405 + Tigger3b DNA MER2_type 719 988 -243 1689 150 20 3 chr2 147421549 147421849 -103266005 - L1P LINE L1 -916 5230 4926 201 268 0 0 chr2 147421947 147421988 -103265866 + MIR SINE MIR 214 254 -8 26 50 0 0 chr2 147422452 147422492 -103265362 + AT_rich Low_complexity Low_complexity 1 40 0 27 29 0 0 chr2 147422676 147422710 -103265144 + AT_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr2 147423649 147423679 -103264175 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 147425236 147425260 -103262594 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 147425432 147425455 -103262399 + AT_rich Low_complexity Low_complexity 1 23 0 2180 271 32 11 chr2 147425740 147426437 -103261417 - L1ME2 LINE L1 -46 6118 5408 1503 95 0 29 chr2 147426767 147427008 -103260846 + L1MA2 LINE L1 6071 6304 0 21 36 0 0 chr2 147427008 147427036 -103260818 + AT_rich Low_complexity Low_complexity 1 28 0 757 214 0 0 chr2 147427136 147427267 -103260587 + FLAM_A SINE Alu 1 131 -2 41 48 0 0 chr2 147429460 147429522 -103258332 + AT_rich Low_complexity Low_complexity 1 62 0 350 264 9 18 chr2 147430508 147430618 -103257236 - Charlie2a DNA MER1_type -6 2856 2748 1055 211 32 11 chr2 147430622 147430901 -103256953 - Charlie2a DNA MER1_type -1852 1010 726 996 288 155 10 chr2 147430891 147431298 -103256556 - Charlie2a DNA MER1_type -2308 474 9 * 244 303 26 0 chr2 147431815 147431891 -103255963 + (CATG)n Simple_repeat Simple_repeat 1 78 0 891 292 33 41 chr2 147432505 147432880 -103254974 + MLT1G1 LTR MaLR 1 414 -181 323 188 58 21 chr2 147432915 147433008 -103254846 + MLT1G1 LTR MaLR 490 555 0 370 307 87 37 chr2 147433161 147433402 -103254452 + L2 LINE L2 1197 1449 -1865 433 390 107 20 chr2 147433402 147434300 -103253554 + L2 LINE L2 1593 2568 -746 546 314 41 85 chr2 147434596 147434914 -103252940 + L2 LINE L2 2969 3272 0 22 56 0 0 chr2 147435237 147435273 -103252581 + AT_rich Low_complexity Low_complexity 1 36 0 239 251 90 28 chr2 147436468 147436584 -103251270 + LTR16A LTR ERVL 1 128 -322 * 457 286 39 13 chr2 147436573 147436727 -103251127 + LTR16A LTR ERVL 287 444 -6 203 227 152 0 chr2 147437211 147437277 -103250577 - MER5B DNA MER1_type -77 101 26 269 306 14 0 chr2 147437394 147437466 -103250388 - MER5A DNA MER1_type -80 109 37 511 15 29 0 chr2 147438201 147438269 -103249585 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 625 182 5 177 chr2 147439085 147439305 -103248549 - MER5A DNA MER1_type -5 184 3 804 297 55 26 chr2 147439378 147439721 -103248133 + L1ME2 LINE L1 5803 6155 -9 320 289 201 29 chr2 147440043 147440282 -103247572 + L2 LINE L2 3033 3312 -1 258 373 62 12 chr2 147441374 147441535 -103246319 - MIR3 SINE MIR -1 207 39 1757 215 99 82 chr2 147444802 147445445 -103242409 - MLT1E1 LTR MaLR 0 654 1 435 63 0 0 chr2 147445563 147445626 -103242228 + (CA)n Simple_repeat Simple_repeat 2 64 0 501 110 30 0 chr2 147445828 147445928 -103241926 + GA-rich Low_complexity Low_complexity 2 104 0 233 250 0 0 chr2 147445976 147446028 -103241826 + MER58 DNA MER1_type 2355 2406 -14 388 292 32 5 chr2 147446394 147446579 -103241275 - HAL1 LINE L1 -1093 1414 1225 319 306 57 83 chr2 147446738 147446931 -103240923 - HAL1 LINE L1 -2319 188 1 1147 282 158 26 chr2 147446956 147448113 -103239741 - L1MCc LINE L1 -4807 2134 815 23 33 0 0 chr2 147449411 147449441 -103238413 + AT_rich Low_complexity Low_complexity 1 30 0 36 23 0 0 chr2 147450440 147450483 -103237371 + AT_rich Low_complexity Low_complexity 1 43 0 1034 292 32 19 chr2 147450757 147451069 -103236785 + L1M3c LINE L1 2 317 -5824 1754 172 26 35 chr2 147451069 147451446 -103236408 - THE1C LTR MaLR -1 374 1 434 75 15 15 chr2 147451446 147451513 -103236341 - THE1C-int LTR MaLR 0 1580 1514 1011 168 6 0 chr2 147451615 147451776 -103236078 + Tigger3(Golem) DNA MER2_type 2868 3029 0 2240 134 11 35 chr2 147452912 147453285 -103234569 - THE1B LTR MaLR 0 364 1 11078 113 6 0 chr2 147453285 147454854 -103233000 - THE1B-int LTR MaLR 0 1580 2 2076 138 3 69 chr2 147454855 147455245 -103232609 - THE1B LTR MaLR 0 364 1 254 280 0 27 chr2 147456709 147456784 -103231070 + CT-rich Low_complexity Low_complexity 4 76 0 442 355 91 14 chr2 147456968 147457188 -103230666 - MIR SINE MIR -6 256 20 542 308 109 55 chr2 147457275 147457776 -103230078 - L2 LINE L2 -12 3260 2680 914 244 45 12 chr2 147458171 147458417 -103229437 + MIR SINE MIR 5 258 -4 538 254 22 0 chr2 147459145 147459283 -103228571 + MIR SINE MIR 44 184 -78 2914 173 31 31 chr2 147459863 147460510 -103227344 - L1MB4 LINE L1 -1 6179 5533 222 91 0 0 chr2 147460527 147460560 -103227294 + (CA)n Simple_repeat Simple_repeat 2 34 0 3418 250 67 48 chr2 147460566 147460960 -103226894 + L1ME2 LINE L1 3787 4172 -1992 2247 92 3 0 chr2 147460960 147461253 -103226601 + AluSp SINE Alu 1 294 -19 3418 250 67 48 chr2 147461253 147463173 -103224681 + L1ME2 LINE L1 4172 6146 -18 1556 171 3 57 chr2 147463517 147463815 -103224039 - AluJb SINE Alu -30 282 1 366 307 100 20 chr2 147464500 147464650 -103223204 + L2 LINE L2 3108 3269 -3 28 0 0 0 chr2 147464723 147464751 -103223103 + AT_rich Low_complexity Low_complexity 1 28 0 765 286 28 14 chr2 147466248 147466461 -103221393 + MIR SINE MIR 23 238 -24 206 328 69 53 chr2 147466920 147467051 -103220803 - MIR3 SINE MIR -15 193 61 341 306 206 5 chr2 147467052 147467251 -103220603 + MIR SINE MIR 10 248 -14 1074 220 23 0 chr2 147468643 147468861 -103218993 + MER58A DNA MER1_type 2 224 0 2093 181 47 2 chr2 147469426 147469834 -103218020 - MSTB LTR MaLR 0 426 1 191 280 0 20 chr2 147471223 147471273 -103216581 + L2 LINE L2 3221 3269 -3 21 71 0 0 chr2 147471533 147471575 -103216279 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr2 147473024 147473056 -103214798 + AT_rich Low_complexity Low_complexity 1 32 0 676 236 28 34 chr2 147475013 147475191 -103212663 - MER45A DNA AcHobo 0 178 2 284 259 27 129 chr2 147475370 147475517 -103212337 + MER102a DNA MER1_type 195 326 -4 577 206 7 29 chr2 147477634 147477770 -103210084 - FLAM_A SINE Alu 0 133 1 240 350 65 77 chr2 147481870 147482193 -103205661 - L2 LINE L2 -19 3253 2935 294 322 26 26 chr2 147482808 147482923 -103204931 - L2 LINE L2 -18 3295 3181 22 35 0 0 chr2 147483103 147483132 -103204722 + AT_rich Low_complexity Low_complexity 1 29 0 433 252 0 64 chr2 147483867 147484022 -103203832 + MLT1E LTR MaLR 11 156 -411 3183 224 36 3 chr2 147484022 147484740 -103203114 + L1MD2 LINE L1 5602 6343 -16 1994 146 33 12 chr2 147484751 147485080 -103202774 + THE1C LTR MaLR 1 336 -39 679 134 22 28 chr2 147485610 147485789 -103202065 + CT-rich Low_complexity Low_complexity 2 179 0 324 327 0 58 chr2 147485960 147486064 -103201790 + MER91A DNA MER1_type 3 100 -96 22 0 0 0 chr2 147487098 147487120 -103200734 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 147487506 147487527 -103200327 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 147488493 147488513 -103199341 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 228 122 0 0 chr2 147488619 147488660 -103199194 + (GA)n Simple_repeat Simple_repeat 2 42 0 181 342 44 9 chr2 147489496 147489610 -103198244 - L2 LINE L2 -1 3312 3195 29 47 0 0 chr2 147490244 147490287 -103197567 + AT_rich Low_complexity Low_complexity 1 43 0 183 340 43 32 chr2 147491191 147491285 -103196569 - MIR SINE MIR -93 115 21 279 79 0 0 chr2 147495391 147495429 -103192425 + (TA)n Simple_repeat Simple_repeat 1 38 0 325 125 18 18 chr2 147495461 147495517 -103192337 - MIR SINE MIR -164 98 43 201 224 0 40 chr2 147495815 147495891 -103191963 + T-rich Low_complexity Low_complexity 2 74 0 21 0 0 0 chr2 147497570 147497591 -103190263 + AT_rich Low_complexity Low_complexity 1 21 0 2270 93 0 3 chr2 147497657 147497958 -103189896 - AluSq SINE Alu -13 300 1 191 204 0 23 chr2 147498015 147498059 -103189795 - L3 LINE CR1 -4 1573 1531 * 1247 320 159 0 chr2 147498045 147498663 -103189191 - L2 LINE L2 -1075 2239 1524 191 320 104 0 chr2 147498738 147498863 -103188991 - L2 LINE L2 -1788 1526 1389 875 269 126 14 chr2 147499375 147499795 -103188059 - L2 LINE L2 -1849 1465 999 24 0 0 0 chr2 147501206 147501230 -103186624 + AT_rich Low_complexity Low_complexity 1 24 0 511 254 36 119 chr2 147502140 147502483 -103185371 + MER102a DNA MER1_type 20 326 -4 1136 207 53 0 chr2 147503566 147503793 -103184061 - MIR SINE MIR -2 260 22 333 82 0 0 chr2 147504451 147504500 -103183354 + (GA)n Simple_repeat Simple_repeat 1 49 0 21 57 0 0 chr2 147505058 147505093 -103182761 + AT_rich Low_complexity Low_complexity 1 35 0 1708 181 3 10 chr2 147505309 147505608 -103182246 + AluJb SINE Alu 1 297 -15 1941 120 0 0 chr2 147505665 147505972 -103181882 + AluSx SINE Alu 1 307 0 225 284 14 14 chr2 147506155 147506229 -103181625 + (TATG)n Simple_repeat Simple_repeat 2 75 0 402 319 101 47 chr2 147506273 147506680 -103181174 + L1ME LINE L1 4902 5330 -816 634 256 135 13 chr2 147506730 147507042 -103180812 + L1ME LINE L1 5455 5804 -317 382 188 17 33 chr2 147507170 147507351 -103180503 + (CATATA)n Simple_repeat Simple_repeat 1 178 0 201 121 0 0 chr2 147507420 147507453 -103180401 + (TA)n Simple_repeat Simple_repeat 2 34 0 25 51 0 0 chr2 147507585 147507624 -103180230 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 147508562 147508583 -103179271 + AT_rich Low_complexity Low_complexity 1 21 0 3394 85 23 6 chr2 147508961 147509443 -103178411 - L1PA10 LINE L1 0 6168 5679 225 242 32 0 chr2 147509498 147509560 -103178294 - MER5A DNA MER1_type -115 74 11 373 321 73 50 chr2 147509625 147509968 -103177886 + L1ME4a LINE L1 4795 5145 -1001 433 302 123 30 chr2 147510065 147510399 -103177455 + L1ME4a LINE L1 5599 5963 -158 214 73 49 0 chr2 147510425 147510466 -103177388 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 370 242 81 25 chr2 147510473 147510634 -103177220 + L1ME4a LINE L1 5946 6115 -6 21 0 0 0 chr2 147511573 147511594 -103176260 + AT_rich Low_complexity Low_complexity 1 21 0 206 200 62 0 chr2 147512329 147512394 -103175460 + (TATAA)n Simple_repeat Simple_repeat 1 69 0 459 276 95 25 chr2 147512462 147512705 -103175149 + MIR SINE MIR 3 262 0 334 313 84 28 chr2 147513096 147513310 -103174544 - L2 LINE L2 -904 2410 2185 717 284 9 32 chr2 147513393 147513611 -103174243 - MER20 DNA MER1_type -1 218 6 238 361 69 32 chr2 147513620 147513966 -103173888 - L2 LINE L2 -1212 2102 1744 1394 279 55 46 chr2 147514158 147514699 -103173155 - MLT1E LTR MaLR -4 589 44 274 292 115 0 chr2 147515706 147515819 -103172035 + MIR SINE MIR 91 216 -46 23 33 0 0 chr2 147515923 147515953 -103171901 + AT_rich Low_complexity Low_complexity 1 30 0 436 308 79 48 chr2 147516719 147517195 -103170659 - MLT1J2 LTR MaLR 0 450 3 21 0 0 0 chr2 147517620 147517641 -103170213 + AT_rich Low_complexity Low_complexity 1 21 0 2190 99 7 0 chr2 147518461 147518755 -103169099 + AluSp SINE Alu 1 296 -17 359 250 263 0 chr2 147518761 147518921 -103168933 + MER102b DNA MER1_type 116 317 -24 526 256 23 23 chr2 147518989 147519122 -103168732 + Charlie1 DNA MER1_type 1 133 -2628 2347 206 81 12 chr2 147519146 147519791 -103168063 + Charlie1 DNA MER1_type 2073 2761 0 30 59 0 0 chr2 147520465 147520516 -103167338 + AT_rich Low_complexity Low_complexity 1 51 0 265 326 139 0 chr2 147521677 147521763 -103166091 - L2 LINE L2 -6 3266 3169 277 322 61 44 chr2 147523540 147523720 -103164134 - MIR3 SINE MIR -17 191 9 344 277 11 11 chr2 147524965 147525059 -103162795 + L1MC4 LINE L1 6611 6704 -1338 21 0 0 0 chr2 147525069 147525090 -103162764 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 147525660 147525686 -103162168 + AT_rich Low_complexity Low_complexity 1 26 0 351 97 0 16 chr2 147526097 147526159 -103161695 - LOR1-int LTR ERV1 -4065 4055 3995 6487 106 9 24 chr2 147526208 147526785 -103161069 - LOR1-int LTR ERV1 -4136 3984 3427 1647 178 24 20 chr2 147526785 147527083 -103160771 - AluSx SINE Alu -9 303 5 6487 106 9 24 chr2 147527083 147527496 -103160358 - LOR1-int LTR ERV1 -4693 3427 3009 1150 274 66 16 chr2 147527843 147528342 -103159512 + L1M4 LINE L1 2163 2686 -3460 236 100 20 100 chr2 147528342 147528392 -103159462 + MLT1K LTR MaLR 1 46 -344 3168 184 15 40 chr2 147528394 147529128 -103158726 + L1MD1 LINE L1 5397 6112 -130 2695 173 2 4 chr2 147529997 147530465 -103157389 + MLT1C LTR MaLR 1 467 0 26 30 0 0 chr2 147531134 147531167 -103156687 + AT_rich Low_complexity Low_complexity 1 33 0 211 111 0 28 chr2 147532159 147532195 -103155659 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 1095 246 75 32 chr2 147532202 147532584 -103155270 + MLT2B1 LTR ERVL 26 465 -50 239 254 16 0 chr2 147532660 147532723 -103155131 + (CATATA)n Simple_repeat Simple_repeat 5 68 0 180 77 0 0 chr2 147532742 147532768 -103155086 + (TA)n Simple_repeat Simple_repeat 2 27 0 228 69 0 0 chr2 147532781 147532810 -103155044 + MLT2B1 LTR ERVL 436 464 0 24 0 0 0 chr2 147534413 147534437 -103153417 + AT_rich Low_complexity Low_complexity 1 24 0 819 190 6 13 chr2 147535147 147535305 -103152549 + MER5A DNA MER1_type 4 160 -29 360 273 53 33 chr2 147535605 147535755 -103152099 - L3b LINE CR1 -209 1374 1222 219 36 0 0 chr2 147535763 147535791 -103152063 + (A)n Simple_repeat Simple_repeat 1 28 0 384 333 65 52 chr2 147536189 147536498 -103151356 + MLT1K LTR MaLR 85 397 -191 29 0 0 0 chr2 147536814 147536843 -103151011 + AT_rich Low_complexity Low_complexity 1 29 0 215 383 101 7 chr2 147536884 147537033 -103150821 - L2 LINE L2 -978 2336 2174 423 0 0 0 chr2 147539372 147539419 -103148435 + (TG)n Simple_repeat Simple_repeat 2 48 0 1585 276 84 50 chr2 147541436 147542163 -103145691 + MER21B LTR ERV1 3 754 -109 251 358 0 18 chr2 147542733 147542842 -103145012 + MIR SINE MIR 123 229 -33 347 352 45 11 chr2 147542873 147543049 -103144805 - L3 LINE CR1 -410 1167 986 218 317 134 0 chr2 147543604 147543686 -103144168 - L3 LINE CR1 -946 631 539 329 324 79 11 chr2 147543845 147544073 -103143781 + MIR SINE MIR 4 250 -12 22 0 0 0 chr2 147544723 147544745 -103143109 + AT_rich Low_complexity Low_complexity 1 22 0 3480 232 39 16 chr2 147545239 147546542 -103141312 - L1MCa LINE L1 -2806 3620 2287 28 61 0 0 chr2 147548948 147548997 -103138857 + AT_rich Low_complexity Low_complexity 1 49 0 216 67 0 0 chr2 147549184 147549214 -103138640 + (TA)n Simple_repeat Simple_repeat 2 31 0 301 315 87 54 chr2 147550443 147550592 -103137262 + L2 LINE L2 3119 3272 0 420 111 0 0 chr2 147550753 147550816 -103137038 + (TC)n Simple_repeat Simple_repeat 2 64 0 970 258 86 64 chr2 147550938 147551439 -103136415 - L1ME1 LINE L1 -6 6229 5718 1048 154 23 0 chr2 147551442 147551617 -103136237 - L1PA15 LINE L1 -262 5903 5725 * 2924 271 67 39 chr2 147551613 147551966 -103135888 - L1ME1 LINE L1 -1911 4304 3962 2212 131 113 15 chr2 147551966 147552356 -103135498 - MSTA LTR MaLR 0 428 1 2924 271 67 39 chr2 147552356 147553460 -103134394 - L1ME1 LINE L1 -2253 3962 2807 2048 156 18 80 chr2 147553484 147553921 -103133933 + MSTB LTR MaLR 15 424 -2 307 277 100 27 chr2 147553993 147554213 -103133641 - L1ME1 LINE L1 -3780 2435 2200 1600 204 3 7 chr2 147554313 147554621 -103133233 + AluJb SINE Alu 1 307 -5 307 182 82 0 chr2 147554816 147554926 -103132928 - L1ME1 LINE L1 -4239 2157 2039 2191 282 97 12 chr2 147554928 147556063 -103131791 - L1ME1 LINE L1 -4595 1801 571 21 0 0 0 chr2 147557359 147557380 -103130474 + AT_rich Low_complexity Low_complexity 1 21 0 326 333 109 34 chr2 147558815 147559136 -103128718 - L2 LINE L2 -3 3310 2966 501 334 171 32 chr2 147559306 147560235 -103127619 - L2 LINE L2 -534 2780 1723 276 348 0 43 chr2 147561544 147561685 -103126169 + MER5B DNA MER1_type 15 149 -29 576 170 0 0 chr2 147562139 147562245 -103125609 + (CA)n Simple_repeat Simple_repeat 2 107 0 21 0 0 0 chr2 147562516 147562537 -103125317 + AT_rich Low_complexity Low_complexity 1 21 0 220 269 25 84 chr2 147562914 147563033 -103124821 - L3 LINE CR1 -397 1180 1069 181 258 56 45 chr2 147563480 147563569 -103124285 + MIR SINE MIR 108 197 -65 21 0 0 0 chr2 147563818 147563839 -103124015 + AT_rich Low_complexity Low_complexity 1 21 0 231 217 58 0 chr2 147564409 147564478 -103123376 - MER116 DNA Mariner -6 74 2 24 0 0 0 chr2 147564683 147564707 -103123147 + AT_rich Low_complexity Low_complexity 1 24 0 281 309 73 8 chr2 147564990 147565113 -103122741 + L2 LINE L2 3179 3309 -4 22 0 0 0 chr2 147565268 147565290 -103122564 + AT_rich Low_complexity Low_complexity 1 22 0 229 275 72 65 chr2 147565294 147565432 -103122422 - MIR SINE MIR -122 140 2 214 304 13 89 chr2 147566405 147566484 -103121370 + L2 LINE L2 3200 3272 0 470 311 22 0 chr2 147566621 147566756 -103121098 - MER5B DNA MER1_type -20 158 21 414 260 19 0 chr2 147566949 147567053 -103120801 - L2 LINE L2 -4 3309 3204 217 370 137 19 chr2 147567557 147567827 -103120027 + L2 LINE L2 2661 2962 -352 630 273 127 23 chr2 147569456 147569676 -103118178 + MIR SINE MIR 18 260 -2 420 308 45 8 chr2 147570402 147570535 -103117319 + MIR SINE MIR 27 164 -98 724 263 16 0 chr2 147570544 147570734 -103117120 - L1 LINE L1 -3294 2852 2660 223 316 53 11 chr2 147570736 147570831 -103117023 + MIR SINE MIR 164 262 0 1891 291 91 31 chr2 147572812 147573640 -103114214 - L2 LINE L2 -2403 911 35 375 292 123 13 chr2 147573981 147574135 -103113719 + MIR SINE MIR 36 206 -56 259 171 0 0 chr2 147574258 147574299 -103113555 + MIR SINE MIR 73 113 -149 24 53 0 0 chr2 147574454 147574492 -103113362 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 147576167 147576195 -103111659 + AT_rich Low_complexity Low_complexity 1 28 0 1356 209 70 3 chr2 147576691 147576978 -103110876 - AluJo SINE Alu -6 306 1 448 353 19 6 chr2 147577017 147577173 -103110681 - MER5A DNA MER1_type -6 183 26 333 264 21 71 chr2 147577177 147577317 -103110537 - MER94 DNA DNA -1 133 1 223 410 51 0 chr2 147577892 147578009 -103109845 - L2 LINE L2 -23 3249 3127 275 239 53 80 chr2 147578217 147578330 -103109524 - L2 LINE L2 -5 3308 3199 21 0 0 0 chr2 147579409 147579430 -103108424 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 147583560 147583583 -103104271 + AT_rich Low_complexity Low_complexity 1 23 0 2190 103 0 35 chr2 147583885 147584195 -103103659 - AluSg SINE Alu -11 299 1 1595 194 52 0 chr2 147585297 147585585 -103102269 + AluJb SINE Alu 1 303 -9 188 287 74 82 chr2 147587856 147587978 -103099876 - MIR3 SINE MIR 0 208 88 198 0 0 0 chr2 147589129 147589151 -103098703 + (A)n Simple_repeat Simple_repeat 1 22 0 1025 179 57 28 chr2 147589418 147589630 -103098224 + MER20 DNA MER1_type 1 218 -1 274 299 119 22 chr2 147589737 147589871 -103097983 + L2 LINE L2 2046 2192 -1122 233 340 31 10 chr2 147589869 147589966 -103097888 + MIR3 SINE MIR 101 199 -9 * 243 261 0 0 chr2 147589977 147590046 -103097808 + A-rich Low_complexity Low_complexity 1 69 0 2141 160 13 69 chr2 147591848 147592299 -103095555 + MSTB LTR MaLR 1 426 0 465 238 38 0 chr2 147592725 147592830 -103095024 - MER5A DNA MER1_type -77 112 4 222 37 0 0 chr2 147593076 147593103 -103094751 + (CA)n Simple_repeat Simple_repeat 2 28 0 1150 222 129 17 chr2 147593574 147593930 -103093924 + MSTD LTR MaLR 1 396 0 324 222 25 99 chr2 147594318 147594480 -103093374 + HAL1 LINE L1 993 1142 -1365 * 1077 287 90 4 chr2 147594472 147594949 -103092905 + HAL1 LINE L1 1637 2154 -353 2333 83 3 0 chr2 147595214 147595514 -103092340 + AluY SINE Alu 1 301 -10 274 222 204 19 chr2 147595527 147595635 -103092219 + HAL1b LINE L1 312 439 -909 299 304 36 9 chr2 147595640 147595752 -103092102 - L2 LINE L2 -6 3307 3193 709 251 191 3 chr2 147595757 147596056 -103091798 + HAL1b LINE L1 435 789 -559 23 33 0 0 chr2 147596058 147596088 -103091766 + AT_rich Low_complexity Low_complexity 1 30 0 305 303 17 11 chr2 147596147 147596322 -103091532 + HAL1b LINE L1 925 1100 -248 197 297 27 27 chr2 147597246 147597320 -103090534 - L2 LINE L2 -71 3242 3169 207 100 0 0 chr2 147597666 147597696 -103090158 + (A)n Simple_repeat Simple_repeat 1 30 0 225 344 32 40 chr2 147599403 147599528 -103088326 + MIR3 SINE MIR 34 157 -51 2136 124 0 16 chr2 147599913 147600228 -103087626 + AluSx SINE Alu 3 312 0 779 312 32 4 chr2 147600297 147600547 -103087307 - MIR SINE MIR -3 259 3 23 33 0 0 chr2 147602178 147602208 -103085646 + AT_rich Low_complexity Low_complexity 1 30 0 23 68 0 0 chr2 147602624 147602668 -103085186 + AT_rich Low_complexity Low_complexity 1 44 0 361 286 20 0 chr2 147602671 147602769 -103085085 - MIR SINE MIR -10 252 153 2489 71 3 3 chr2 147602803 147603114 -103084740 + AluY SINE Alu 1 311 0 1825 137 14 54 chr2 147603115 147603465 -103084389 - THE1B LTR MaLR -28 336 1 253 305 34 34 chr2 147603471 147603589 -103084265 - MIR SINE MIR -74 188 71 708 312 78 40 chr2 147603618 147603810 -103084044 - MLT1G LTR MaLR 0 590 407 1931 158 8 53 chr2 147603810 147604203 -103083651 - THE1C LTR MaLR 0 375 1 708 312 78 40 chr2 147604203 147604290 -103083564 - MLT1G LTR MaLR -183 407 325 1262 127 80 0 chr2 147604290 147604503 -103083351 - MER30 DNA MER1_type 0 230 1 708 312 78 40 chr2 147604503 147604777 -103083077 - MLT1G LTR MaLR -265 325 15 276 301 92 31 chr2 147604958 147605121 -103082733 - MLT1H1 LTR MaLR -295 254 39 278 165 0 143 chr2 147605327 147605418 -103082436 + MER116 DNA Mariner 3 80 0 27 0 0 0 chr2 147605447 147605474 -103082380 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr2 147609213 147609235 -103078619 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 147609296 147609319 -103078535 + AT_rich Low_complexity Low_complexity 1 23 0 1683 165 85 20 chr2 147610401 147610753 -103077101 - THE1C LTR MaLR 0 375 1 2246 103 57 80 chr2 147611974 147612175 -103075679 + MSTA LTR MaLR 1 205 -223 2241 117 0 0 chr2 147612175 147612475 -103075379 + AluSx SINE Alu 1 300 -12 2246 103 57 80 chr2 147612475 147612711 -103075143 + MSTA LTR MaLR 205 428 0 25 0 0 0 chr2 147613249 147613274 -103074580 + AT_rich Low_complexity Low_complexity 1 25 0 12628 106 15 26 chr2 147613374 147615806 -103072048 + L1PA7 LINE L1 1 2446 -4015 11981 96 3 3 chr2 147615806 147618316 -103069538 + L1PA7 LINE L1 3942 6463 -6 25 31 0 0 chr2 147618394 147618426 -103069428 + AT_rich Low_complexity Low_complexity 1 32 0 2184 127 0 6 chr2 147618523 147618837 -103069017 - AluSx SINE Alu 0 312 1 1067 161 47 47 chr2 147619132 147619236 -103068618 - MER46A DNA MER2_type 0 236 133 302 244 227 25 chr2 147619236 147619355 -103068499 + MER46A DNA MER2_type 4 146 -90 263 156 0 22 chr2 147619405 147619450 -103068404 - L2 LINE L2 -79 3234 3191 2317 211 24 6 chr2 147619454 147619922 -103067932 + MER70B LTR ERVL 1 476 -102 544 260 170 45 chr2 147619990 147620302 -103067552 - L2 LINE L2 -152 3161 2811 1022 212 67 24 chr2 147620326 147620581 -103067273 - MER58B DNA MER1_type -16 325 60 976 309 45 26 chr2 147620620 147620746 -103067108 - L2 LINE L2 -505 2809 2687 2517 104 13 16 chr2 147620746 147621122 -103066732 + THE1C LTR MaLR 1 375 0 976 309 45 26 chr2 147621122 147621377 -103066477 - L2 LINE L2 -627 2687 2421 249 304 14 0 chr2 147621410 147621479 -103066375 + MIR SINE MIR 84 153 -109 213 318 131 0 chr2 147622049 147622156 -103065698 - L2 LINE L2 0 3313 3193 189 107 0 0 chr2 147622235 147622263 -103065591 + (T)n Simple_repeat Simple_repeat 1 28 0 1359 97 6 0 chr2 147622277 147622453 -103065401 - AluY SINE Alu -134 177 1 8387 140 16 41 chr2 147622595 147624051 -103063803 - THE1C-int LTR MaLR -160 1420 1 1778 162 29 50 chr2 147624051 147624434 -103063420 - THE1C LTR MaLR 0 375 1 4311 245 80 32 chr2 147624434 147625167 -103062687 + L1MA9 LINE L1 312 1008 -5202 251 27 0 27 chr2 147625167 147625204 -103062650 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 4311 245 80 32 chr2 147625204 147627560 -103060294 + L1MA9 LINE L1 1008 3227 -2983 1173 157 5 5 chr2 147627581 147627785 -103060069 + AluSg/x SINE Alu 94 297 -15 738 186 105 0 chr2 147627790 147628000 -103059854 + L1MA9 LINE L1 3240 3471 -2739 * 4094 171 62 71 chr2 147627992 147629888 -103057966 + L1MA9 LINE L1 4472 6376 0 714 273 29 5 chr2 147630166 147630375 -103057479 - MER102a DNA MER1_type 0 330 117 23 0 0 0 chr2 147630845 147630868 -103056986 + AT_rich Low_complexity Low_complexity 1 23 0 1424 102 5 0 chr2 147631016 147631213 -103056641 + AluSq SINE Alu 111 308 -5 2176 125 3 3 chr2 147633191 147633503 -103054351 + AluSp SINE Alu 1 312 -1 325 177 25 0 chr2 147633549 147633628 -103054226 + GA-rich Low_complexity Low_complexity 2 82 0 21 36 0 0 chr2 147634029 147634057 -103053797 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr2 147634482 147634524 -103053330 + AT_rich Low_complexity Low_complexity 1 42 0 267 154 15 31 chr2 147638663 147638728 -103049126 + (TG)n Simple_repeat Simple_repeat 2 65 0 306 132 0 0 chr2 147640487 147640540 -103047314 + (TTTA)n Simple_repeat Simple_repeat 4 56 0 239 224 0 0 chr2 147642864 147642913 -103044941 - L2 LINE L2 0 3313 3265 484 304 150 18 chr2 147643202 147643528 -103044326 - L2 LINE L2 -1235 2079 1711 236 275 75 0 chr2 147643555 147643635 -103044219 - MER91C DNA MER1_type -54 86 1 266 264 97 0 chr2 147643985 147644057 -103043797 + L2 LINE L2 3225 3303 -10 465 269 92 57 chr2 147644200 147644516 -103043338 + MLT1L LTR MaLR 118 444 -171 795 306 64 3 chr2 147644718 147645026 -103042828 - MLT1E LTR MaLR -172 421 1 1274 272 35 113 chr2 147645026 147645758 -103042096 - MLT1E-int LTR MaLR 0 1371 697 1662 222 101 60 chr2 147645889 147646400 -103041454 - MLT1E-int LTR MaLR -708 663 124 2135 108 3 3 chr2 147646400 147646696 -103041158 - AluSx SINE Alu -16 296 1 1662 222 101 60 chr2 147646696 147646769 -103041085 - MLT1E-int LTR MaLR -1247 124 55 2099 209 103 22 chr2 147646781 147647278 -103040576 - MLT1E LTR MaLR -1 592 56 2013 133 38 49 chr2 147647297 147647393 -103040461 + MLT1B LTR MaLR 1 97 -293 1910 194 11 0 chr2 147647393 147647754 -103040100 + MLT1A1 LTR MaLR 1 365 0 2013 133 38 49 chr2 147647754 147648025 -103039829 + MLT1B LTR MaLR 97 364 -26 21 0 0 0 chr2 147650088 147650109 -103037745 + AT_rich Low_complexity Low_complexity 1 21 0 207 333 21 11 chr2 147651045 147651138 -103036716 - L3b LINE CR1 -110 1473 1380 273 39 59 0 chr2 147652197 147652248 -103035606 + T-rich Low_complexity Low_complexity 2 55 0 260 245 54 44 chr2 147653662 147653800 -103034054 + MIR SINE MIR 16 152 -71 1379 169 9 91 chr2 147654426 147654746 -103033108 - AluJo SINE Alu -16 296 3 258 136 0 0 chr2 147654913 147654957 -103032897 + (T)n Simple_repeat Simple_repeat 1 44 0 188 347 0 0 chr2 147655242 147655291 -103032563 + L2 LINE L2 3010 3058 -214 215 95 0 48 chr2 147655494 147655536 -103032318 + (TAAAAA)n Simple_repeat Simple_repeat 2 41 0 22 0 0 0 chr2 147655723 147655745 -103032109 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr2 147655802 147655837 -103032017 + AT_rich Low_complexity Low_complexity 1 35 0 23 68 0 0 chr2 147655904 147655948 -103031906 + AT_rich Low_complexity Low_complexity 1 44 0 327 274 16 0 chr2 147656048 147656172 -103031682 - MER114 LTR ERV -82 566 441 303 60 20 0 chr2 147656345 147656395 -103031459 + Charlie5 DNA MER1_type 2506 2556 -56 438 228 7 44 chr2 147656555 147656691 -103031163 - MER114 LTR ERV -502 146 16 361 248 9 18 chr2 147656783 147656896 -103030958 + L1MB8 LINE L1 6066 6177 -1 1617 181 4 11 chr2 147657001 147657277 -103030577 + AluJo SINE Alu 1 274 -38 28 91 0 0 chr2 147657342 147657419 -103030435 + AT_rich Low_complexity Low_complexity 1 77 0 1719 155 10 79 chr2 147657576 147657969 -103029885 + MER47A DNA MER2_type 1 366 0 530 302 146 0 chr2 147657997 147658189 -103029665 - MIR SINE MIR -34 228 9 1702 174 119 0 chr2 147659062 147659389 -103028465 - MER47A DNA MER2_type 0 366 1 442 162 10 10 chr2 147659527 147659626 -103028228 + (TA)n Simple_repeat Simple_repeat 1 99 0 216 67 0 0 chr2 147659625 147659655 -103028199 + (GA)n Simple_repeat Simple_repeat 2 31 0 * 6216 143 15 16 chr2 147659839 147660813 -103027041 + L1MA3 LINE L1 4799 5774 -531 2194 97 0 40 chr2 147660813 147661134 -103026720 + AluY SINE Alu 1 308 -3 6216 143 15 16 chr2 147661134 147661665 -103026189 + L1MA3 LINE L1 5774 6304 -1 1451 56 6 0 chr2 147661665 147661843 -103026011 - AluY SINE Alu -9 302 124 24 32 0 0 chr2 147661843 147661874 -103025980 + AT_rich Low_complexity Low_complexity 1 31 0 224 224 0 17 chr2 147662357 147662415 -103025439 + CT-rich Low_complexity Low_complexity 2 58 0 32 0 0 0 chr2 147662614 147662646 -103025208 + AT_rich Low_complexity Low_complexity 1 32 0 23 97 0 0 chr2 147662842 147662914 -103024940 + AT_rich Low_complexity Low_complexity 1 72 0 194 207 17 0 chr2 147662919 147662977 -103024877 + (TA)n Simple_repeat Simple_repeat 1 59 0 1750 128 31 56 chr2 147664361 147664681 -103023173 + AluJb SINE Alu 1 312 0 29 0 0 0 chr2 147665260 147665289 -103022565 + AT_rich Low_complexity Low_complexity 1 29 0 2183 108 3 0 chr2 147665291 147665588 -103022266 - AluY SINE Alu -12 299 2 182 284 122 61 chr2 147665953 147666101 -103021753 - MIR SINE MIR -25 237 81 905 291 108 33 chr2 147666198 147666679 -103021175 - L3 LINE CR1 -258 1319 803 319 226 17 87 chr2 147668000 147668115 -103019739 + L2 LINE L2 3162 3268 -4 577 259 0 0 chr2 147668379 147668491 -103019363 - MER5A DNA MER1_type -72 117 6 237 236 94 57 chr2 147668764 147668870 -103018984 - L3b LINE CR1 -121 1462 1353 23 54 0 0 chr2 147668953 147668990 -103018864 + AT_rich Low_complexity Low_complexity 1 37 0 505 293 61 29 chr2 147670173 147670419 -103017435 + MER112 DNA MER1_type 1 254 -6 198 0 0 0 chr2 147671499 147671521 -103016333 + (TTA)n Simple_repeat Simple_repeat 3 24 0 319 73 0 0 chr2 147671521 147671562 -103016292 - L1PA3 LINE L1 -18 6137 6097 243 67 0 0 chr2 147671562 147671592 -103016262 + L1P LINE L1 5218 5247 -899 327 246 42 84 chr2 147671592 147671734 -103016120 + MIR3 SINE MIR 67 202 -6 315 310 145 16 chr2 147672610 147672827 -103015027 + MIR SINE MIR 5 252 -10 1456 303 107 61 chr2 147673096 147673657 -103014197 - L2 LINE L2 -18 3295 2761 2436 128 22 3 chr2 147673657 147674025 -103013829 + THE1C LTR MaLR 1 375 0 1456 303 107 61 chr2 147674025 147674582 -103013272 - L2 LINE L2 -552 2761 2105 504 297 129 10 chr2 147674897 147675106 -103012748 - MIR SINE MIR -1 261 28 24 32 0 0 chr2 147675552 147675583 -103012271 + AT_rich Low_complexity Low_complexity 1 31 0 1283 251 13 7 chr2 147675868 147676167 -103011687 + LTR16C LTR ERVL 191 491 0 282 332 79 25 chr2 147679942 147680144 -103007710 - L2 LINE L2 -189 3083 2871 255 152 0 0 chr2 147680834 147680880 -103006974 + A-rich Low_complexity Low_complexity 1 46 0 4162 269 100 24 chr2 147681816 147683420 -103004434 + L1ME1 LINE L1 450 2298 -3917 9057 104 16 7 chr2 147683420 147684696 -103003158 - HSMAR1 DNA Mariner 0 1287 1 4162 269 100 24 chr2 147684696 147685726 -103002128 + L1ME1 LINE L1 2298 3248 -2967 4977 243 53 28 chr2 147685747 147687520 -103000334 + L1ME1 LINE L1 3524 5399 -836 2201 121 0 3 chr2 147687520 147687833 -103000021 + AluSx SINE Alu 1 312 0 4977 243 53 28 chr2 147687833 147688687 -102999167 + L1ME1 LINE L1 5399 6230 -5 21 36 0 0 chr2 147689567 147689595 -102998259 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 147689971 147689994 -102997860 + AT_rich Low_complexity Low_complexity 1 23 0 5288 193 26 3 chr2 147690494 147691592 -102996262 - L1MC1 LINE L1 -17 6316 5193 1248 208 45 11 chr2 147691596 147691861 -102995993 - AluJo SINE Alu -12 300 27 1846 236 31 20 chr2 147691861 147692416 -102995438 - L1MC1 LINE L1 -957 5189 4629 32 75 0 0 chr2 147692632 147692699 -102995155 + AT_rich Low_complexity Low_complexity 1 67 0 22 35 0 0 chr2 147692743 147692772 -102995082 + AT_rich Low_complexity Low_complexity 1 29 0 430 197 8 32 chr2 147693516 147693621 -102994233 + MER5A DNA MER1_type 4 105 -84 456 231 218 7 chr2 147693720 147693867 -102993987 + MIR SINE MIR 26 203 -59 462 65 0 0 chr2 147694638 147694700 -102993154 + (TTATA)n Simple_repeat Simple_repeat 3 64 0 373 296 9 0 chr2 147695048 147695156 -102992698 + MER94 DNA DNA 26 134 0 472 217 45 18 chr2 147697423 147697585 -102990269 - MLT1H1 LTR MaLR 0 549 382 646 261 12 36 chr2 147697607 147697772 -102990082 - MLT1H1 LTR MaLR -363 192 32 238 236 59 148 chr2 147697864 147698101 -102989753 - MLT1H1-int LTR MaLR -40 1331 1116 284 229 98 57 chr2 147698213 147698335 -102989519 - MLT1A1 LTR MaLR -34 521 395 626 228 89 25 chr2 147698342 147698500 -102989354 + MER45 DNA AcHobo 1 168 -785 372 305 111 62 chr2 147699973 147700199 -102987655 + MIR SINE MIR 20 256 -6 309 264 54 0 chr2 147700705 147700834 -102987020 - LTR33 LTR ERVL -48 473 338 240 229 16 0 chr2 147700945 147701006 -102986848 + MLT2B1 LTR ERVL 419 480 -40 279 287 0 0 chr2 147701015 147701102 -102986752 - L1MC4 LINE L1 -1342 6700 6614 237 325 0 0 chr2 147701102 147701185 -102986669 - L1MC4 LINE L1 -1345 6697 6615 225 309 24 0 chr2 147701135 147701219 -102986635 + L1MC4 LINE L1 6615 6700 -1342 * 234 264 0 58 chr2 147701196 147701283 -102986571 + L1MC4 LINE L1 6614 6695 -1347 * 259 296 23 0 chr2 147701251 147701339 -102986515 - L1MC4 LINE L1 -1339 6703 6614 239 289 0 0 chr2 147701289 147701372 -102986482 + L1MC4 LINE L1 6614 6696 -1346 * 337 51 17 85 chr2 147701374 147701433 -102986421 + MLT2B1 LTR ERVL 464 518 -2 1032 83 143 0 chr2 147701779 147701947 -102985907 + L1PB1 LINE L1 5960 6151 0 242 226 16 16 chr2 147702650 147702712 -102985142 + GA-rich Low_complexity Low_complexity 4 65 0 1984 180 71 33 chr2 147702836 147703286 -102984568 - MLT1C LTR MaLR 0 467 1 24 0 0 0 chr2 147703858 147703882 -102983972 + AT_rich Low_complexity Low_complexity 1 24 0 720 120 48 0 chr2 147704522 147704647 -102983207 + L1PA13 LINE L1 6033 6163 0 25 0 0 0 chr2 147704661 147704686 -102983168 + AT_rich Low_complexity Low_complexity 1 25 0 2045 132 7 0 chr2 147705286 147705582 -102982272 + AluSc SINE Alu 1 298 -11 1764 203 0 6 chr2 147705682 147706008 -102981846 - MLT1A1 LTR MaLR -40 325 2 21 0 0 0 chr2 147706317 147706338 -102981516 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr2 147707963 147707988 -102979866 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 667 271 65 65 chr2 147708488 147708886 -102978968 - L1MC5 LINE L1 -62 7899 7502 666 198 106 103 chr2 147709571 147709844 -102978010 - L1MD1 LINE L1 -5 6237 5964 278 340 39 0 chr2 147711064 147711167 -102976687 + MIR SINE MIR 65 171 -91 201 129 0 0 chr2 147711253 147711284 -102976570 + (TG)n Simple_repeat Simple_repeat 2 32 0 1810 214 35 16 chr2 147711855 147712285 -102975569 - L1MD3 LINE L1 -2 7993 7556 25 0 0 0 chr2 147716600 147716625 -102971229 + AT_rich Low_complexity Low_complexity 1 25 0 244 83 28 0 chr2 147717328 147717364 -102970490 - LTR33A LTR ERVL -349 174 138 3878 224 69 17 chr2 147717466 147719200 -102968654 - L1MD1 LINE L1 -412 5830 4018 1331 132 5 0 chr2 147719201 147719398 -102968456 - MLT2A2 LTR ERVL -255 198 1 23 54 0 0 chr2 147721432 147721469 -102966385 + AT_rich Low_complexity Low_complexity 1 37 0 488 259 76 44 chr2 147721941 147722099 -102965755 + MER5A DNA MER1_type 27 189 0 343 268 49 24 chr2 147722918 147723041 -102964813 - L1MC4 LINE L1 -1303 6739 6614 857 331 75 51 chr2 147723320 147723869 -102963985 - MLT1K LTR MaLR 0 588 27 2790 91 0 3 chr2 147724150 147724525 -102963329 + THE1C LTR MaLR 2 375 0 262 276 55 39 chr2 147724543 147724670 -102963184 - L3 LINE CR1 -199 1378 1250 2155 116 0 3 chr2 147726217 147726519 -102961335 + AluSc SINE Alu 1 301 -8 306 0 0 0 chr2 147727805 147727839 -102960015 + (CA)n Simple_repeat Simple_repeat 2 35 0 405 109 0 0 chr2 147728972 147729036 -102958818 + (TC)n Simple_repeat Simple_repeat 1 64 0 749 261 16 0 chr2 147729420 147729604 -102958250 - MER5A DNA MER1_type 0 189 3 415 232 97 58 chr2 147730292 147730447 -102957407 - MIR3 SINE MIR -5 203 43 323 319 77 12 chr2 147730584 147730753 -102957101 + MIR SINE MIR 9 188 -74 186 171 0 0 chr2 147732174 147732215 -102955639 + (TCCA)n Simple_repeat Simple_repeat 3 43 0 308 339 54 9 chr2 147732223 147732335 -102955519 - L2 LINE L2 0 3272 3156 582 276 87 25 chr2 147732441 147732637 -102955217 - MIR SINE MIR -38 224 17 267 103 0 0 chr2 147734247 147734286 -102953568 + (T)n Simple_repeat Simple_repeat 1 39 0 337 315 9 0 chr2 147735274 147735385 -102952469 + MER94 DNA DNA 10 121 -13 263 296 42 17 chr2 147735988 147736077 -102951777 - MER5A DNA MER1_type 0 189 88 6494 227 55 7 chr2 147738860 147740160 -102947694 - L1MB8 LINE L1 -5 6173 4936 2264 173 64 15 chr2 147740160 147740564 -102947290 + MSTB LTR MaLR 3 426 0 6494 227 55 7 chr2 147740564 147741806 -102946048 - L1MB8 LINE L1 -1242 4936 3474 439 248 34 117 chr2 147742558 147742764 -102945090 + MIR SINE MIR 2 190 -72 181 318 222 5 chr2 147743097 147743286 -102944568 - MIR SINE MIR -10 252 23 995 227 17 37 chr2 147744539 147744839 -102943015 + L1M4 LINE L1 3474 3767 -2379 950 183 34 0 chr2 147744839 147745014 -102942840 - MER20 DNA MER1_type -27 192 12 183 205 0 0 chr2 147746454 147746493 -102941361 + A-rich Low_complexity Low_complexity 1 39 0 185 252 67 76 chr2 147747909 147748028 -102939826 + MIR SINE MIR 27 144 -64 949 42 0 0 chr2 147748217 147748335 -102939519 + MLT2A2 LTR ERVL 1 118 -335 396 133 145 0 chr2 147748330 147748373 -102939481 + MLT2A2 LTR ERVL 359 394 -59 * 288 0 0 0 chr2 147748373 147748405 -102939449 + (TG)n Simple_repeat Simple_repeat 1 32 0 396 133 145 0 chr2 147748405 147748444 -102939410 + MLT2A2 LTR ERVL 394 453 0 5189 77 7 3 chr2 147748444 147749133 -102938721 + HERVL-A2 LTR ERVL 1 692 -4962 2307 77 61 0 chr2 147749201 147749511 -102938343 + MLT2A2 LTR ERVL 125 453 0 330 292 0 0 chr2 147749518 147749607 -102938247 + L1MC4 LINE L1 6615 6703 -1339 2787 187 38 55 chr2 147751405 147752040 -102935814 - MLT-int LTR MaLR -1052 683 60 420 299 47 8 chr2 147802074 147802201 -102885653 + MER5B DNA MER1_type 1 132 -46 1610 242 20 18 chr2 147802705 147803152 -102884702 - L1ME2 LINE L1 0 6164 5717 542 279 208 0 chr2 147803331 147803485 -102884369 - MER5A DNA MER1_type 0 189 4 26 0 0 0 chr2 147803773 147803799 -102884055 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr2 147803869 147803894 -102883960 + AT_rich Low_complexity Low_complexity 1 25 0 354 260 0 62 chr2 147804386 147804532 -102883322 + HAL1 LINE L1 1270 1406 -1101 48 18 0 0 chr2 147804550 147804605 -102883249 + AT_rich Low_complexity Low_complexity 1 55 0 198 0 0 0 chr2 147804702 147804724 -102883130 + (A)n Simple_repeat Simple_repeat 1 22 0 21 43 0 0 chr2 147804730 147804753 -102883101 + GC_rich Low_complexity Low_complexity 1 23 0 515 155 0 0 chr2 147804787 147804871 -102882983 + AluSg/x SINE Alu 219 302 -10 538 143 0 0 chr2 147805109 147805186 -102882668 - AluS SINE Alu -235 77 1 2187 98 7 3 chr2 147805339 147805644 -102882210 + AluSg SINE Alu 1 306 -4 206 300 44 44 chr2 147806025 147806115 -102881739 - L2 LINE L2 0 3272 3183 1548 191 49 0 chr2 147806239 147806527 -102881327 + AluJo SINE Alu 1 302 -10 246 176 0 0 chr2 147807410 147807461 -102880393 + (TG)n Simple_repeat Simple_repeat 1 51 0 1801 138 109 56 chr2 147807824 147808051 -102879803 - MLT2C1 LTR ERVL 0 397 141 2186 66 0 7 chr2 147808051 147808338 -102879516 - L1PA4 LINE L1 0 6155 5871 1801 138 109 56 chr2 147808338 147808487 -102879367 - MLT2C1 LTR ERVL -256 141 1 439 280 104 57 chr2 147810115 147810433 -102877421 - LTR16C LTR ERVL -3 488 156 187 375 0 0 chr2 147810725 147810813 -102877041 - MIR3 SINE MIR -5 203 116 347 200 67 56 chr2 147810931 147811021 -102876833 - L2 LINE L2 -10 3262 3172 200 116 0 70 chr2 147811232 147811275 -102876579 + (TTTTTG)n Simple_repeat Simple_repeat 6 45 0 613 312 122 62 chr2 147811343 147812155 -102875699 + L2 LINE L2 1957 2817 -497 1811 169 0 27 chr2 147812810 147813111 -102874743 + AluSx SINE Alu 1 293 -19 37 0 0 0 chr2 147813111 147813148 -102874706 + AT_rich Low_complexity Low_complexity 1 37 0 309 68 0 0 chr2 147814202 147814246 -102873608 + (CA)n Simple_repeat Simple_repeat 1 44 0 539 256 57 34 chr2 147815034 147815210 -102872644 - L2 LINE L2 0 3313 3134 261 320 31 82 chr2 147818889 147819083 -102868771 + L2 LINE L2 1764 1947 -1367 282 360 18 22 chr2 147819673 147819898 -102867956 + L2 LINE L2 2056 2279 -1035 36 23 0 0 chr2 147819910 147819953 -102867901 + AT_rich Low_complexity Low_complexity 1 43 0 2323 96 35 3 chr2 147819977 147820320 -102867534 + THE1A LTR MaLR 2 355 0 312 70 0 0 chr2 147820327 147820370 -102867484 + (CA)n Simple_repeat Simple_repeat 2 44 0 335 348 112 48 chr2 147820526 147820963 -102866891 + L2 LINE L2 2325 2789 -525 188 310 234 13 chr2 147821234 147821392 -102866462 + L2 LINE L2 3121 3313 0 1174 214 77 57 chr2 147822006 147822460 -102865394 + Charlie1b DNA MER1_type 61 523 0 298 289 82 50 chr2 147826839 147826998 -102860856 + MER5B DNA MER1_type 15 178 0 302 208 0 42 chr2 147828041 147828113 -102859741 - HsTC2 DNA Tc2 -1811 87 19 1272 99 16 0 chr2 147828113 147828295 -102859559 + L1PB1 LINE L1 5966 6150 -1 4333 77 16 0 chr2 147829011 147829585 -102858269 + L1PA8A LINE L1 5546 6128 -3 435 19 0 0 chr2 147829788 147829814 -102858040 + (TG)n Simple_repeat Simple_repeat 1 78 0 435 19 0 0 chr2 147829814 147829866 -102857988 + (TG)n Simple_repeat Simple_repeat 1 52 0 492 252 141 51 chr2 147830232 147830466 -102857388 - MIR SINE MIR 0 262 8 25 31 0 0 chr2 147833056 147833088 -102854766 + AT_rich Low_complexity Low_complexity 1 32 0 391 221 44 35 chr2 147833277 147833390 -102854464 - HsTC2 DNA Tc2 -1 1897 1784 628 251 132 92 chr2 147833391 147833761 -102854093 - HsTC2 DNA Tc2 -310 1590 50 626 46 0 23 chr2 147833761 147833848 -102854006 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 208 312 192 0 chr2 147833888 147834013 -102853841 + MIR SINE MIR 106 254 -8 2159 128 0 0 chr2 147834333 147834631 -102853223 - AluSc SINE Alu -11 298 1 523 316 74 0 chr2 147834638 147834828 -102853026 + MIR SINE MIR 53 256 -6 671 255 87 5 chr2 147835363 147835559 -102852295 + MIR SINE MIR 2 213 -49 270 333 38 9 chr2 147835587 147835692 -102852162 + L2 LINE L2 3164 3271 -1 1379 95 0 0 chr2 147835863 147836042 -102851812 - AluSg/x SINE Alu -5 305 127 299 288 34 34 chr2 147836060 147836178 -102851676 + MIR3 SINE MIR 87 204 -4 1131 144 0 0 chr2 147837625 147837798 -102850056 + AluSg/x SINE Alu 139 311 -1 204 280 20 0 chr2 147838800 147838850 -102849004 - MIR3 SINE MIR -48 160 110 21 36 0 0 chr2 147838983 147839011 -102848843 + AT_rich Low_complexity Low_complexity 1 28 0 362 331 23 74 chr2 147840413 147840670 -102847184 - MIR SINE MIR -1 261 18 351 270 43 9 chr2 147840740 147840855 -102846999 + MIR SINE MIR 123 241 -21 21 36 0 0 chr2 147842080 147842108 -102845746 + AT_rich Low_complexity Low_complexity 1 28 0 226 253 67 13 chr2 147842813 147842888 -102844966 - L2 LINE L2 -32 3281 3203 21 0 0 0 chr2 147843064 147843085 -102844769 + AT_rich Low_complexity Low_complexity 1 21 0 483 311 34 46 chr2 147843245 147843483 -102844371 - MER102a DNA MER1_type 0 330 96 240 355 27 18 chr2 147844825 147844935 -102842919 + MIR3 SINE MIR 59 169 -39 2467 78 3 0 chr2 147844954 147845263 -102842591 - AluY SINE Alu -1 310 1 238 104 21 21 chr2 147845469 147845517 -102842337 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 389 311 119 18 chr2 147845598 147845875 -102841979 - L1ME4a LINE L1 -178 5943 5639 313 276 41 0 chr2 147845876 147845974 -102841880 - L1ME4a LINE L1 -508 5613 5512 210 71 0 0 chr2 147846152 147846180 -102841674 + (CA)n Simple_repeat Simple_repeat 1 28 0 252 0 0 0 chr2 147847786 147847814 -102840040 + (A)n Simple_repeat Simple_repeat 1 28 0 499 325 25 12 chr2 147847952 147848115 -102839739 + MER5B DNA MER1_type 1 165 -13 267 279 105 0 chr2 147848227 147848313 -102839541 + L2 LINE L2 3215 3309 -4 383 343 44 22 chr2 147849353 147849627 -102838227 + L3 LINE CR1 571 850 -727 27 87 0 0 chr2 147849907 147849976 -102837878 + AT_rich Low_complexity Low_complexity 1 69 0 278 271 181 12 chr2 147850402 147850568 -102837286 + L2 LINE L2 2221 2414 -900 392 274 77 36 chr2 147850578 147850852 -102837002 - L1MEc LINE L1 -4089 2307 2023 310 323 32 16 chr2 147850860 147850984 -102836870 + L2 LINE L2 2397 2522 -792 1994 180 90 0 chr2 147850998 147851174 -102836680 - MER47B DNA MER2_type -1905 418 259 2397 162 40 2 chr2 147851174 147851575 -102836279 + MER47B DNA MER2_type 2 417 -1 1994 180 90 0 chr2 147851575 147851776 -102836078 - MER47B DNA MER2_type -2064 259 7 981 278 85 16 chr2 147851781 147852326 -102835528 + L2 LINE L2 2536 3124 -189 503 136 47 89 chr2 147852991 147853160 -102834694 - Charlie5 DNA MER1_type -27 2585 2424 227 242 0 32 chr2 147855580 147855642 -102832212 - L2 LINE L2 0 3272 3213 228 377 50 25 chr2 147857057 147857256 -102830598 + L2 LINE L2 2487 2690 -624 23 0 0 0 chr2 147857485 147857508 -102830346 + AT_rich Low_complexity Low_complexity 1 23 0 2435 87 0 0 chr2 147858725 147859036 -102828818 + AluY SINE Alu 1 311 0 2291 94 3 7 chr2 147860260 147860557 -102827297 - AluSg SINE Alu -14 296 1 189 359 0 0 chr2 147860730 147860783 -102827071 - L2 LINE L2 -16 3256 3204 1860 143 76 25 chr2 147862531 147862888 -102824966 + THE1C LTR MaLR 1 375 0 180 200 0 0 chr2 147863089 147863134 -102824720 + (TTG)n Simple_repeat Simple_repeat 2 46 0 894 298 117 20 chr2 147864615 147865163 -102822691 - L2 LINE L2 0 3313 2712 405 58 0 0 chr2 147865180 147865232 -102822622 + (CA)n Simple_repeat Simple_repeat 1 52 0 249 253 101 30 chr2 147866951 147867050 -102820804 + L1M4c LINE L1 8 1272 -5816 303 287 35 52 chr2 147867481 147867596 -102820258 + L1M4c LINE L1 1325 1437 -5732 3461 211 42 31 chr2 147867597 147868685 -102819169 + L1M4c LINE L1 1562 2591 -4521 23 68 0 0 chr2 147869371 147869415 -102818439 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr2 147869556 147869577 -102818277 + AT_rich Low_complexity Low_complexity 1 21 0 256 384 67 34 chr2 147869639 147870065 -102817789 - L2 LINE L2 -219 3053 2613 1726 166 3 7 chr2 147870257 147870567 -102817287 + AluJb SINE Alu 1 309 0 273 276 67 9 chr2 147870987 147871092 -102816762 + L3b LINE CR1 1319 1429 -154 346 280 20 20 chr2 147872343 147872443 -102815411 - MIR SINE MIR -64 144 45 324 70 0 0 chr2 147872517 147872560 -102815294 + (CTATT)n Simple_repeat Simple_repeat 3 45 0 2159 109 0 3 chr2 147872560 147872845 -102815009 - AluSx SINE Alu -28 284 1 592 261 64 30 chr2 147873224 147873458 -102814396 - LTR16B LTR ERVL 0 464 223 831 206 0 0 chr2 147873650 147873796 -102814058 + FRAM SINE Alu 1 146 -30 207 0 0 0 chr2 147873798 147873821 -102814033 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 620 301 56 0 chr2 147874469 147874685 -102813169 - MIR SINE MIR -5 257 30 334 311 92 15 chr2 147875076 147875272 -102812582 - MIR SINE MIR -6 256 46 246 59 0 0 chr2 147875781 147875815 -102812039 - L2 LINE L2 -4 3309 3276 1973 108 58 4 chr2 147875832 147876109 -102811745 + AluSc SINE Alu 1 292 -17 965 268 113 44 chr2 147876384 147876926 -102810928 - MLT1E LTR MaLR 0 593 15 254 262 103 148 chr2 147877629 147877892 -102809962 - L2 LINE L2 -33 3239 2989 2153 119 3 0 chr2 147877953 147878247 -102809607 + AluSx SINE Alu 1 295 -17 959 267 112 44 chr2 147878522 147879065 -102808789 - MLT1E LTR MaLR 0 593 14 2567 117 5 11 chr2 147881762 147882139 -102805715 + THE1C LTR MaLR 1 375 0 254 173 19 19 chr2 147882935 147882987 -102804867 - MIR SINE MIR -102 160 109 1975 119 43 57 chr2 147885445 147885814 -102802040 + THE1B LTR MaLR 1 364 0 12010 89 2 2 chr2 147885814 147887394 -102800460 + THE1B-int LTR MaLR 1 1580 0 1918 132 32 54 chr2 147887394 147887766 -102800088 + THE1B LTR MaLR 1 364 0 268 304 72 43 chr2 147889108 147889246 -102798608 - MIR3 SINE MIR -46 162 21 2618 111 3 8 chr2 147889600 147889977 -102797877 - THE1C LTR MaLR 0 375 1 8903 121 60 46 chr2 147889977 147891535 -102796319 - THE1C-int LTR MaLR 0 1580 1 2437 129 8 0 chr2 147891535 147891907 -102795947 - THE1C LTR MaLR 0 375 1 722 289 102 35 chr2 147894011 147894385 -102793469 + MLT1I LTR MaLR 10 408 -1 21 0 0 0 chr2 147896005 147896026 -102791828 + AT_rich Low_complexity Low_complexity 1 21 0 423 314 80 37 chr2 147896049 147896237 -102791617 - MIR SINE MIR -62 200 5 556 288 53 37 chr2 147896253 147896576 -102791278 - MARNA DNA Mariner -49 537 210 547 299 76 56 chr2 147896747 147897155 -102790699 + MLT1K LTR MaLR 105 520 -68 34 65 0 0 chr2 147897794 147897856 -102789998 + AT_rich Low_complexity Low_complexity 1 62 0 1207 199 7 7 chr2 147898736 147899022 -102788832 + AluSg SINE Alu 1 286 -14 23 33 0 0 chr2 147899390 147899420 -102788434 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 147901646 147901674 -102786180 + AT_rich Low_complexity Low_complexity 1 28 0 343 295 58 40 chr2 147901818 147901991 -102785863 + MIR SINE MIR 12 187 -75 252 371 38 38 chr2 147902267 147902426 -102785428 - MER5A DNA MER1_type -10 179 21 * 501 311 40 14 chr2 147902283 147902431 -102785423 + MER5A DNA MER1_type 36 187 -2 621 231 35 6 chr2 147902735 147902908 -102784946 - MER5B DNA MER1_type 0 178 1 690 273 34 0 chr2 147903116 147903321 -102784533 - MIR SINE MIR -1 261 50 329 267 12 0 chr2 147903323 147903409 -102784445 - MIR SINE MIR -158 104 18 298 174 72 14 chr2 147903405 147903474 -102784380 - MIR SINE MIR -66 196 124 * 432 0 0 0 chr2 147903705 147903753 -102784101 + (TG)n Simple_repeat Simple_repeat 1 48 0 212 246 87 14 chr2 147903953 147904022 -102783832 + L2 LINE L2 3199 3272 0 1185 161 93 4 chr2 147904310 147904589 -102783265 + MER33 DNA MER1_type 5 308 -16 2074 124 16 0 chr2 147905095 147905401 -102782453 + AluSq SINE Alu 1 311 -2 2143 120 13 0 chr2 147905524 147905833 -102782021 + AluSp SINE Alu 1 313 0 23 0 0 0 chr2 147905986 147906009 -102781845 + AT_rich Low_complexity Low_complexity 1 23 0 1952 75 40 0 chr2 147906308 147906561 -102781293 + AluY SINE Alu 37 299 -12 235 224 20 0 chr2 147908051 147908100 -102779754 + CT-rich Low_complexity Low_complexity 3 52 0 1247 84 6 0 chr2 147908768 147908946 -102778908 + (GA)n Simple_repeat Simple_repeat 2 180 0 671 122 5 53 chr2 147908948 147909136 -102778718 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 202 61 61 0 chr2 147909136 147909169 -102778685 + GA-rich Low_complexity Low_complexity 4 38 0 247 263 40 13 chr2 147910542 147910618 -102777236 - MIR SINE MIR -71 191 114 357 289 79 32 chr2 147910641 147910831 -102777023 - L2 LINE L2 -257 3015 2817 2289 96 20 3 chr2 147910915 147911217 -102776637 + AluSg SINE Alu 1 307 -3 27 29 0 0 chr2 147911974 147912008 -102775846 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr2 147912515 147912544 -102775310 + AT_rich Low_complexity Low_complexity 1 29 0 309 109 0 0 chr2 147912819 147912874 -102774980 + (TC)n Simple_repeat Simple_repeat 1 55 0 2137 129 47 16 chr2 147914925 147915289 -102772565 + THE1C LTR MaLR 1 375 0 516 302 52 12 chr2 147915630 147915802 -102772052 + MIR SINE MIR 28 206 -56 280 310 0 14 chr2 147919404 147919475 -102768379 + MIR SINE MIR 13 82 -180 180 167 0 0 chr2 147919613 147919661 -102768193 + (TTAG)n Simple_repeat Simple_repeat 3 50 0 783 58 19 0 chr2 147919996 147920099 -102767755 - L1PA10 LINE L1 -3 6165 6061 22 0 0 0 chr2 147920099 147920121 -102767733 + AT_rich Low_complexity Low_complexity 1 22 0 594 316 52 5 chr2 147920249 147920461 -102767393 + MIR SINE MIR 40 261 -1 280 366 49 6 chr2 147921546 147921710 -102766144 - MIR3 SINE MIR -10 198 28 5231 124 57 8 chr2 147922928 147923785 -102764069 + L1MC1 LINE L1 5433 6331 -2 3067 170 33 30 chr2 147924486 147925121 -102762733 + L1MA9 LINE L1 5676 6312 0 34 55 0 0 chr2 147925141 147925196 -102762658 + AT_rich Low_complexity Low_complexity 1 55 0 2166 87 0 84 chr2 147925823 147926135 -102761719 + AluSq SINE Alu 1 285 -28 210 118 0 0 chr2 147926135 147926169 -102761685 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 2166 87 0 84 chr2 147926169 147926191 -102761663 + AluSq SINE Alu 285 307 -6 378 270 81 16 chr2 147926247 147926394 -102761460 + L1M4 LINE L1 2 427 -6219 3309 227 41 44 chr2 147926410 147926671 -102761183 + L1M4 LINE L1 829 1089 -5555 2133 88 0 4 chr2 147926671 147926945 -102760909 + AluSg SINE Alu 1 273 -37 2183 107 7 16 chr2 147926945 147927252 -102760602 + AluSg SINE Alu 3 308 -2 3309 227 41 44 chr2 147927252 147928907 -102758947 + L1M4 LINE L1 1087 2834 -3810 482 282 58 46 chr2 147930618 147930877 -102756977 + HAL1 LINE L1 1043 1304 -1203 1124 251 98 52 chr2 147931090 147931497 -102756357 - MLT1F LTR MaLR 0 542 117 975 172 74 5 chr2 147931499 147931702 -102756152 - Tigger1 DNA MER2_type 0 2418 2202 879 142 0 71 chr2 147931691 147931860 -102755994 - Tigger1 DNA MER2_type -2261 157 1 * 13596 148 50 4 chr2 147931863 147934153 -102753701 - Tigger1 DNA MER2_type -4 2414 20 1964 131 24 0 chr2 147935928 147936218 -102751636 + AluSx SINE Alu 1 297 -15 2978 256 127 48 chr2 147936691 147937760 -102750094 + HAL1 LINE L1 604 1868 -639 1894 162 0 3 chr2 147937760 147938057 -102749797 + AluJo SINE Alu 1 296 -16 2978 256 127 48 chr2 147938057 147938752 -102749102 + HAL1 LINE L1 1868 2507 0 1708 132 64 0 chr2 147939745 147940056 -102747798 + L1MA6 LINE L1 5962 6292 -8 24 53 0 0 chr2 147940056 147940094 -102747760 + AT_rich Low_complexity Low_complexity 1 38 0 390 75 149 0 chr2 147940610 147940677 -102747177 + MADE1 DNA Mariner 1 77 -3 300 70 0 0 chr2 147941325 147941368 -102746486 + (TC)n Simple_repeat Simple_repeat 2 44 0 349 256 23 0 chr2 147942061 147942147 -102745707 - MIR SINE MIR -2 260 173 212 273 0 0 chr2 147942448 147942492 -102745362 + L2 LINE L2 2226 2269 -1045 383 345 103 6 chr2 147942717 147942882 -102744972 + MIR SINE MIR 18 198 -64 4751 163 27 33 chr2 147942909 147944715 -102743139 + L1PB4 LINE L1 4364 6148 -8 241 224 75 75 chr2 147945253 147945360 -102742494 + L2 LINE L2 3206 3312 -1 520 246 182 20 chr2 147946186 147946389 -102741465 - MIR SINE MIR -25 237 2 1807 160 12 6 chr2 147946752 147947071 -102740783 - L1MA7 LINE L1 -517 5774 5454 2156 198 40 6 chr2 147947074 147947568 -102740286 + L1MA7 LINE L1 5781 6291 0 2122 109 33 0 chr2 147947608 147947911 -102739943 - AluSq SINE Alu 0 313 1 23 33 0 0 chr2 147948323 147948353 -102739501 + AT_rich Low_complexity Low_complexity 1 30 0 2026 96 33 0 chr2 147948499 147948795 -102739059 + AluY SINE Alu 1 305 0 258 106 0 0 chr2 147949051 147949098 -102738756 + (T)n Simple_repeat Simple_repeat 1 47 0 38 51 0 0 chr2 147949293 147949352 -102738502 + AT_rich Low_complexity Low_complexity 1 59 0 225 373 82 0 chr2 147949737 147949847 -102738007 - L2 LINE L2 -2 3311 3193 269 239 0 157 chr2 147950971 147951105 -102736749 - L3b LINE CR1 -230 1353 1241 269 373 97 39 chr2 147951270 147951712 -102736142 + L2 LINE L2 2804 3271 -1 612 370 99 8 chr2 147951720 147952104 -102735750 + L3 LINE CR1 759 1177 -400 783 260 55 97 chr2 147952127 147952698 -102735156 - L2 LINE L2 0 3313 2759 41852 36 26 2 chr2 147952749 147958752 -102729102 + L1PA2 LINE L1 9 6155 0 24 53 0 0 chr2 147959123 147959161 -102728693 + AT_rich Low_complexity Low_complexity 1 38 0 276 77 0 0 chr2 147959607 147959646 -102728208 + (CA)n Simple_repeat Simple_repeat 2 40 0 257 278 222 0 chr2 147961829 147961919 -102725935 + L2 LINE L2 3195 3304 -9 1003 245 82 61 chr2 147964140 147964289 -102723565 + MER113 DNA MER1_type? 34 178 -343 2046 139 0 0 chr2 147964289 147964591 -102723263 + AluSx SINE Alu 1 302 -10 1003 245 82 61 chr2 147964591 147964919 -102722935 + MER113 DNA MER1_type? 178 521 0 999 272 84 26 chr2 147965143 147965452 -102722402 - MLT1I LTR MaLR -57 352 26 1020 214 5 27 chr2 147966584 147966808 -102721046 + MER20 DNA MER1_type 1 219 0 28 29 0 0 chr2 147967272 147967307 -102720547 + AT_rich Low_complexity Low_complexity 1 35 0 231 61 0 0 chr2 147967725 147967758 -102720096 + (TC)n Simple_repeat Simple_repeat 2 34 0 363 367 20 92 chr2 147968030 147968324 -102719530 - L2 LINE L2 0 3272 3000 359 339 156 38 chr2 147968379 147968801 -102719053 - L2 LINE L2 -585 2729 2258 25 31 0 0 chr2 147969009 147969041 -102718813 + AT_rich Low_complexity Low_complexity 1 32 0 891 278 72 23 chr2 147970044 147970667 -102717187 - L1MC4a LINE L1 -1772 6036 5327 309 250 81 41 chr2 147970672 147970844 -102717010 - L1MC4a LINE L1 -837 5309 5131 717 284 58 101 chr2 147971056 147971693 -102716161 + L1M4 LINE L1 4403 5012 -1134 209 360 85 49 chr2 147972100 147972264 -102715590 + MIR3 SINE MIR 37 168 -40 779 211 64 34 chr2 147973505 147973709 -102714145 - MER63A DNA MER1_type 0 210 1 290 366 0 0 chr2 147974443 147974566 -102713288 + G-rich Low_complexity Low_complexity 1 123 0 1742 201 33 8 chr2 147974786 147975154 -102712700 + MLT1B LTR MaLR 1 377 -13 1078 198 50 119 chr2 147975201 147975620 -102712234 + MLT1B LTR MaLR 1 390 0 2309 102 0 0 chr2 147975910 147976205 -102711649 - AluSg SINE Alu -15 295 1 180 291 0 18 chr2 147976662 147976717 -102711137 + L2 LINE L2 3188 3241 -31 180 346 20 40 chr2 147976722 147976823 -102711031 - MIR SINE MIR -80 128 30 234 224 0 0 chr2 147978281 147978330 -102709524 - L2 LINE L2 -13 3300 3252 371 335 122 41 chr2 147978332 147978577 -102709277 - LTR33 LTR ERVL -255 266 2 233 206 65 93 chr2 147978995 147979102 -102708752 + L2 LINE L2 3169 3272 0 411 212 83 38 chr2 147979286 147979418 -102708436 - MIR SINE MIR -6 256 119 420 82 0 0 chr2 147981759 147981820 -102706034 + (CA)n Simple_repeat Simple_repeat 1 61 0 194 389 22 0 chr2 147983066 147983156 -102704698 - MER5A DNA MER1_type -37 152 61 349 352 93 17 chr2 147983330 147983566 -102704288 - MIR SINE MIR -4 258 5 238 348 161 0 chr2 147984490 147984602 -102703252 - L2 LINE L2 0 3272 3143 1619 234 9 3 chr2 147985887 147986220 -102701634 + MER58B DNA MER1_type 1 335 -6 243 354 150 0 chr2 147986908 147987021 -102700833 + L2 LINE L2 3143 3272 0 293 350 24 32 chr2 147988735 147988858 -102698996 - L2 LINE L2 -192 3080 2959 2028 111 0 42 chr2 147989224 147989530 -102698324 - AluSx SINE Alu -19 293 1 342 0 0 0 chr2 147990276 147990314 -102697540 + (TG)n Simple_repeat Simple_repeat 1 38 0 243 274 43 8 chr2 147990902 147991019 -102696835 + (CATATA)n Simple_repeat Simple_repeat 3 123 0 3370 175 6 28 chr2 147991423 147992098 -102695756 - L1MB8 LINE L1 -5 6173 5514 196 217 67 50 chr2 147992322 147992382 -102695472 + MIR3 SINE MIR 120 180 -28 596 335 8 21 chr2 147992986 147993222 -102694632 - MIR SINE MIR 0 262 30 1591 127 5 5 chr2 147994652 147994872 -102692982 - AluSq SINE Alu -93 220 1 2304 98 0 0 chr2 147995025 147995330 -102692524 + AluSg SINE Alu 1 305 -5 206 300 44 44 chr2 147995711 147995801 -102692053 - L2 LINE L2 0 3272 3183 1548 191 49 0 chr2 147995925 147996213 -102691641 + AluJo SINE Alu 1 302 -10 27 0 0 0 chr2 148000265 148000292 -102687562 + AT_rich Low_complexity Low_complexity 1 27 0 2321 75 0 0 chr2 148000670 148000987 -102686867 + AluY SINE Alu 1 317 0 1013 200 15 15 chr2 148001491 148001691 -102686163 - MER20 DNA MER1_type -5 214 15 2112 138 21 9 chr2 148003349 148003682 -102684172 - MER1B DNA MER1_type 0 337 1 544 199 14 64 chr2 148003699 148003840 -102684014 - MER69 DNA AcHobo -4 2522 2389 454 200 0 0 chr2 148003873 148003948 -102683906 - MER69 DNA AcHobo -2451 75 1 256 330 44 11 chr2 148004777 148004868 -102682986 - MER91C DNA MER1_type -11 129 36 466 201 205 5 chr2 148005898 148006031 -102681823 + MER5A DNA MER1_type 15 183 -6 186 154 103 0 chr2 148008365 148008404 -102679450 - L2 LINE L2 -8 3305 3263 * 197 185 56 74 chr2 148008371 148008425 -102679429 - MIR SINE MIR -9 253 201 583 184 15 0 chr2 148008922 148009058 -102678796 + CT-rich Low_complexity Low_complexity 3 140 0 288 0 0 0 chr2 148009226 148009258 -102678596 + (TG)n Simple_repeat Simple_repeat 1 32 0 248 331 25 32 chr2 148009450 148009607 -102678247 + L2 LINE L2 2863 3018 -254 1186 272 68 64 chr2 148009861 148010394 -102677460 - MLT1F LTR MaLR -2 540 6 873 217 0 30 chr2 148010706 148010904 -102676950 + MER3 DNA MER1_type 2 193 -16 320 303 66 46 chr2 148011002 148011035 -102676819 + MIR SINE MIR 31 62 -200 2606 115 0 3 chr2 148011035 148011399 -102676455 + THE1B LTR MaLR 2 364 0 320 303 66 46 chr2 148011399 148011517 -102676337 + MIR SINE MIR 62 185 -77 225 94 0 0 chr2 148012827 148012859 -102674995 + (T)n Simple_repeat Simple_repeat 1 32 0 493 308 55 11 chr2 148015584 148015766 -102672088 + MIR SINE MIR 49 238 -24 285 98 0 0 chr2 148015826 148015867 -102671987 + (TA)n Simple_repeat Simple_repeat 1 41 0 333 317 139 40 chr2 148015875 148016575 -102671279 + L1ME LINE L1 4123 4891 -1255 323 268 71 27 chr2 148017071 148017254 -102670600 + L1ME LINE L1 5586 5776 -345 246 81 0 0 chr2 148017378 148017415 -102670439 + (CA)n Simple_repeat Simple_repeat 2 38 0 297 167 0 0 chr2 148021118 148021172 -102666682 + A-rich Low_complexity Low_complexity 1 54 0 249 196 0 71 chr2 148023574 148023630 -102664224 + L2 LINE L2 3252 3303 -10 198 265 0 20 chr2 148023803 148023852 -102664002 + MIR SINE MIR 63 110 -152 732 275 5 16 chr2 148023878 148024067 -102663787 - MER117 DNA MER1_type -7 190 4 180 138 0 0 chr2 148024068 148024097 -102663757 + MIR3 SINE MIR 152 180 -28 * 205 317 73 12 chr2 148024081 148024163 -102663691 + MER5A DNA MER1_type 73 159 -30 285 336 86 31 chr2 148024653 148024781 -102663073 - L2 LINE L2 -22 3250 3116 317 343 20 20 chr2 148025015 148025161 -102662693 + MLT1K LTR MaLR 11 156 -432 605 350 38 4 chr2 148027675 148027915 -102659939 - MIR SINE MIR -12 250 3 289 364 129 20 chr2 148027954 148028248 -102659606 - L3 LINE CR1 -84 1493 1168 1000 243 56 26 chr2 148030270 148030574 -102657280 - MLT1J1 LTR MaLR -132 314 2 6736 244 68 12 chr2 148031505 148034620 -102653234 - L1MB8 LINE L1 -16 6973 3661 5316 143 20 30 chr2 148034655 148035607 -102652247 - L1MA4 LINE L1 -6 6294 5353 1479 113 4 0 chr2 148035607 148035836 -102652018 + L1 LINE L1 4568 4797 -1349 1344 109 16 0 chr2 148035837 148036020 -102651834 + AluSq SINE Alu 1 186 -127 1901 239 97 47 chr2 148036020 148038011 -102649843 - L1MB8 LINE L1 -4796 2163 3 3516 59 0 0 chr2 148038264 148038708 -102649146 - L1PA8 LINE L1 -1 6171 5728 1770 161 75 30 chr2 148039491 148039864 -102647990 + MLT1B LTR MaLR 1 390 0 261 53 0 80 chr2 148040644 148040719 -102647135 + (GGAGA)n Simple_repeat Simple_repeat 3 71 0 368 285 93 52 chr2 148040719 148040949 -102646905 + MIR SINE MIR 7 256 -6 195 305 86 53 chr2 148046394 148046545 -102641309 - MIR SINE MIR 0 262 107 28 29 0 0 chr2 148047281 148047316 -102640538 + AT_rich Low_complexity Low_complexity 1 35 0 338 310 18 9 chr2 148047787 148047900 -102639954 + MER81 DNA DNA 1 114 0 615 252 19 67 chr2 148048375 148048662 -102639192 + L1MC4 LINE L1 6979 7207 -754 1757 142 13 16 chr2 148048769 148049078 -102638776 + AluJo SINE Alu 1 308 -4 248 241 47 85 chr2 148049091 148049327 -102638527 + L1MC5 LINE L1 7717 7943 -18 357 319 32 0 chr2 148049895 148049989 -102637865 + L2 LINE L2 3201 3297 -16 375 23 0 0 chr2 148050190 148050234 -102637620 + (CA)n Simple_repeat Simple_repeat 2 45 0 311 399 20 26 chr2 148050311 148050464 -102637390 + L2 LINE L2 3117 3268 -4 295 342 84 13 chr2 148051018 148051173 -102636681 + L2 LINE L2 3016 3181 -91 229 270 27 54 chr2 148051733 148051807 -102636047 - L2 LINE L2 -1 3271 3200 23 54 0 0 chr2 148052799 148052836 -102635018 + AT_rich Low_complexity Low_complexity 1 37 0 228 350 60 30 chr2 148053942 148054142 -102633712 - L2 LINE L2 -419 2895 2690 180 204 41 20 chr2 148054172 148054221 -102633633 - L2 LINE L2 -2 3311 3262 243 167 42 21 chr2 148054909 148054957 -102632897 + LTR16A1 LTR ERVL 409 457 0 301 353 40 33 chr2 148055110 148055260 -102632594 - L2 LINE L2 -562 2752 2602 185 304 80 32 chr2 148055353 148055478 -102632376 - L2 LINE L2 -887 2427 2297 289 352 106 25 chr2 148055517 148055716 -102632138 - MIR SINE MIR -11 251 37 223 236 31 126 chr2 148056472 148056599 -102631255 - MIR3 SINE MIR -5 203 89 503 247 40 7 chr2 148057007 148057157 -102630697 - MER5A DNA MER1_type -32 157 3 204 371 57 0 chr2 148057164 148057234 -102630620 + L2 LINE L2 3149 3222 -50 22 35 0 0 chr2 148060805 148060834 -102627020 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 148061739 148061760 -102626094 + AT_rich Low_complexity Low_complexity 1 21 0 411 316 43 0 chr2 148062206 148062323 -102625531 - L2 LINE L2 -15 3257 3136 321 318 15 61 chr2 148062587 148062785 -102625069 - MIR SINE MIR -49 213 31 660 282 53 56 chr2 148063731 148064071 -102623783 - MLT1I LTR MaLR 0 409 71 535 302 47 12 chr2 148064796 148064968 -102622886 + MIR SINE MIR 12 189 -73 5772 136 55 6 chr2 148064982 148065970 -102621884 + Tigger1 DNA MER2_type 1 1036 -1382 28629 108 14 51 chr2 148065973 148071747 -102616107 - L1MC/D LINE L1 -711 5461 13 6558 111 9 7 chr2 148071760 148072727 -102615127 + Tigger1 DNA MER2_type 1449 2417 -1 364 328 119 8 chr2 148074020 148074154 -102613700 + MIR3 SINE MIR 27 175 -33 206 401 23 0 chr2 148074547 148074679 -102613175 - MIR SINE MIR -2 260 126 183 244 73 49 chr2 148078138 148078220 -102609634 + L2 LINE L2 3147 3230 -83 566 305 23 18 chr2 148078412 148078612 -102609242 + MIR SINE MIR 2 201 -61 465 19 0 0 chr2 148082758 148082812 -102605042 + (TG)n Simple_repeat Simple_repeat 2 55 0 654 265 150 12 chr2 148088517 148088857 -102598997 - LTR33 LTR ERVL -26 495 109 204 141 24 94 chr2 148089102 148089187 -102598667 + A-rich Low_complexity Low_complexity 3 81 0 264 319 106 0 chr2 148089941 148090054 -102597800 - L2 LINE L2 0 3272 3148 622 200 21 7 chr2 148090638 148090778 -102597076 + MER5B DNA MER1_type 25 166 -12 23 54 0 0 chr2 148093413 148093450 -102594404 + AT_rich Low_complexity Low_complexity 1 37 0 1291 208 18 103 chr2 148093565 148093964 -102593890 - MLT1A1 LTR MaLR 0 365 1 1025 63 0 0 chr2 148094444 148094571 -102593283 - L1P LINE L1 -5397 749 623 673 93 0 0 chr2 148094571 148094657 -102593197 - L1P LINE L1 -6050 96 11 5615 205 23 8 chr2 148094668 148095933 -102591921 - L1 LINE L1 -1013 5133 3850 184 299 15 45 chr2 148096429 148096496 -102591358 + L2 LINE L2 3188 3252 -20 568 341 66 79 chr2 148096513 148097044 -102590810 - L2 LINE L2 -337 2977 2454 3477 241 41 8 chr2 148097823 148098958 -102588896 + L1PA8 LINE L1 4986 6164 -8 21 0 0 0 chr2 148102153 148102174 -102585680 + AT_rich Low_complexity Low_complexity 1 21 0 237 145 32 48 chr2 148104026 148104088 -102583766 - L1M1 LINE L1 -461 5841 5781 611 253 31 63 chr2 148104296 148105053 -102582801 - L1ME1 LINE L1 -18 6408 5700 * 4145 256 76 24 chr2 148105052 148107109 -102580745 - L1ME1 LINE L1 -2098 4308 2190 1448 229 79 98 chr2 148107096 148108055 -102579799 - L1ME1 LINE L1 -4697 1709 762 * 6436 112 42 19 chr2 148108454 148109501 -102578353 - MER11C LTR ERVK 0 1071 1 419 208 7 28 chr2 148109863 148110007 -102577847 + GA-rich Low_complexity Low_complexity 2 142 0 1808 176 3 0 chr2 148110026 148110327 -102577527 + AluJb SINE Alu 1 302 -10 232 175 22 58 chr2 148110337 148110474 -102577380 + GA-rich Low_complexity Low_complexity 2 133 0 3799 145 37 63 chr2 148110555 148111361 -102576493 - LTR1 LTR ERV1 0 785 1 5787 97 30 7 chr2 148111716 148112584 -102575270 + L1MA3 LINE L1 5417 6304 -1 2474 67 0 0 chr2 148112743 148113040 -102574814 + AluY SINE Alu 14 310 -1 30 27 0 0 chr2 148113990 148114027 -102573827 + AT_rich Low_complexity Low_complexity 1 37 0 2337 94 0 7 chr2 148114100 148114408 -102573446 - AluY SINE Alu -5 306 1 2193 204 66 13 chr2 148114670 148115140 -102572714 - MLT1D LTR MaLR -10 495 1 2283 85 0 0 chr2 148115158 148115462 -102572392 + AluY SINE Alu 1 304 0 282 202 143 12 chr2 148115567 148115651 -102572203 - LTR33 LTR ERVL -35 486 392 623 277 127 23 chr2 148115771 148115991 -102571863 - LTR33 LTR ERVL -272 249 7 21 0 0 0 chr2 148116189 148116210 -102571644 + AT_rich Low_complexity Low_complexity 1 21 0 3275 79 2 19 chr2 148116217 148116662 -102571192 + L1PA10 LINE L1 5707 6145 -23 180 0 0 0 chr2 148116662 148116682 -102571172 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 3275 79 2 19 chr2 148116682 148116704 -102571150 + L1PA10 LINE L1 6145 6166 -2 470 348 93 18 chr2 148116785 148117220 -102570634 - ERVL LTR ERVL -234 5251 4767 324 0 0 0 chr2 148117220 148117256 -102570598 + (GA)n Simple_repeat Simple_repeat 1 36 0 470 348 93 18 chr2 148117256 148117329 -102570525 - ERVL LTR ERVL -718 4767 4701 885 337 27 16 chr2 148117437 148117882 -102569972 - ERVL LTR ERVL -3902 1862 1413 329 306 96 13 chr2 148118353 148118510 -102569344 + MIR SINE MIR 60 229 -33 1231 325 154 20 chr2 148120961 148121709 -102566145 + L2 LINE L2 1875 2522 -791 225 94 0 0 chr2 148121709 148121741 -102566113 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1231 325 154 20 chr2 148121741 148122200 -102565654 + L2 LINE L2 2522 3249 -64 243 0 0 0 chr2 148122236 148122263 -102565591 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 206 324 0 0 chr2 148122366 148122437 -102565417 + (ATG)n Simple_repeat Simple_repeat 2 72 0 29 0 0 0 chr2 148124942 148124971 -102562883 + AT_rich Low_complexity Low_complexity 1 29 0 3992 128 8 11 chr2 148126788 148127415 -102560439 + L1PA16 LINE L1 5533 6157 -9 296 312 73 9 chr2 148127765 148127874 -102559980 + MIR SINE MIR 97 212 -50 2938 225 24 43 chr2 148128769 148129681 -102558173 - L1ME1 LINE L1 -81 6880 5981 531 143 163 10 chr2 148129848 148129946 -102557908 + FLAM_C SINE Alu 1 113 -30 199 91 23 23 chr2 148129946 148129990 -102557864 + (TA)n Simple_repeat Simple_repeat 1 44 0 729 262 73 16 chr2 148129993 148130241 -102557613 - L1ME1 LINE L1 -1053 5888 5627 227 263 0 0 chr2 148130263 148130343 -102557511 - L1MC4 LINE L1 -1349 6693 6614 * 485 271 7 0 chr2 148130335 148130475 -102557379 - L1ME1 LINE L1 -1301 5640 5500 * 780 215 128 0 chr2 148130468 148130710 -102557144 - L1ME1 LINE L1 -2943 3998 3726 5897 264 62 21 chr2 148130713 148131814 -102556040 - L1M4 LINE L1 -1448 4698 3644 2420 113 11 17 chr2 148131814 148132176 -102555678 + THE1B LTR MaLR 5 364 0 5897 264 62 21 chr2 148132176 148133332 -102554522 - L1M4 LINE L1 -2502 3644 2347 * 13689 36 0 0 chr2 148133323 148135010 -102552844 - L1PA3 LINE L1 -2177 3969 2283 11882 27 7 0 chr2 148135010 148137200 -102550654 + L1PA3 LINE L1 3971 6167 0 2772 270 56 43 chr2 148137241 148139419 -102548435 - L1ME1 LINE L1 -3933 3189 656 503 316 74 20 chr2 148139552 148139796 -102548058 - L1ME1 LINE L1 -5826 597 341 634 240 53 101 chr2 148139824 148140189 -102547665 + MLT2C1 LTR ERVL 1 382 -15 383 0 21 0 chr2 148140189 148140236 -102547618 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 492 18 0 0 chr2 148140237 148140294 -102547560 + (CATA)n Simple_repeat Simple_repeat 4 60 0 634 240 53 101 chr2 148140294 148140343 -102547511 + MLT2C1 LTR ERVL 381 397 0 573 340 158 8 chr2 148140343 148140900 -102546954 - L2 LINE L2 -93 3220 2564 618 283 50 17 chr2 148140910 148141150 -102546704 - L2 LINE L2 -626 2688 2441 324 361 146 14 chr2 148141159 148141372 -102546482 + L2 LINE L2 3030 3270 -2 22 35 0 0 chr2 148141399 148141428 -102546426 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 148141715 148141740 -102546114 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 148143725 148143746 -102544108 + AT_rich Low_complexity Low_complexity 1 21 0 211 209 23 0 chr2 148146588 148146631 -102541223 + MIR SINE MIR 98 141 -67 22 0 0 0 chr2 148148668 148148690 -102539164 + AT_rich Low_complexity Low_complexity 1 22 0 2398 93 0 0 chr2 148149346 148149646 -102538208 - AluSg SINE Alu -10 300 1 258 32 0 0 chr2 148152804 148152835 -102535019 + (T)n Simple_repeat Simple_repeat 1 31 0 198 103 0 0 chr2 148152903 148152932 -102534922 + (CA)n Simple_repeat Simple_repeat 1 29 0 756 291 131 19 chr2 148153049 148153469 -102534385 - MARNA DNA Mariner -80 506 40 402 332 42 25 chr2 148153685 148153923 -102533931 + MIR SINE MIR 20 261 -1 302 364 30 15 chr2 148155540 148155672 -102532182 + L2 LINE L2 3139 3272 0 1711 270 56 63 chr2 148156024 148156971 -102530883 + L2 LINE L2 2387 3313 0 184 314 174 12 chr2 148157524 148157610 -102530244 - L2 LINE L2 -9 3304 3205 * 418 320 100 13 chr2 148157601 148157901 -102529953 + L2 LINE L2 2307 2632 -682 525 381 15 34 chr2 148157980 148158248 -102529606 + L2 LINE L2 3000 3262 -10 1302 267 106 51 chr2 148158251 148158760 -102529094 + Zaphod DNA AcHobo 1 537 -3494 226 218 195 23 chr2 148158813 148158900 -102528954 + L1ME4a LINE L1 5496 5597 -2211 5056 130 3 10 chr2 148158908 148159686 -102528168 + L1PA16 LINE L1 5344 6115 -51 1170 178 0 5 chr2 148159690 148159890 -102527964 + L1PA16 LINE L1 5635 5835 -319 373 98 0 0 chr2 148159890 148159936 -102527918 + L1PA16 LINE L1 6107 6157 -9 1170 178 0 5 chr2 148159936 148159960 -102527894 + L1PA16 LINE L1 5835 5858 -296 705 253 5 31 chr2 148160003 148160197 -102527657 + MIR SINE MIR 53 241 -21 213 39 0 0 chr2 148160250 148160276 -102527578 + (CAT)n Simple_repeat Simple_repeat 1 26 0 315 347 19 32 chr2 148160430 148160646 -102527208 + HAL1b LINE L1 1123 1335 -13 355 313 85 20 chr2 148160714 148160915 -102526939 + MLT1I LTR MaLR 7 220 -189 569 276 170 47 chr2 148162641 148163065 -102524789 + L1ME4a LINE L1 5598 6073 -48 206 235 20 0 chr2 148165468 148165519 -102522335 + L2 LINE L2 3262 3313 0 311 266 32 11 chr2 148165910 148166004 -102521850 - MIR SINE MIR -2 260 165 442 270 33 53 chr2 148166009 148166161 -102521693 - L2 LINE L2 0 3313 3165 432 319 19 25 chr2 148166172 148166332 -102521522 - MIR SINE MIR -103 159 1 285 316 51 8 chr2 148166561 148166678 -102521176 + MLT1I LTR MaLR 33 154 -255 2357 85 10 0 chr2 148166857 148167164 -102520690 - AluSg SINE Alu 0 310 1 416 281 158 12 chr2 148169282 148169453 -102518401 - MIR SINE MIR -47 215 20 455 311 30 7 chr2 148169964 148170099 -102517755 + MIR3 SINE MIR 26 163 -45 1595 157 24 87 chr2 148170516 148170715 -102517139 - AluJb SINE Alu 0 312 141 1835 108 0 4 chr2 148170715 148170965 -102516889 - AluSg SINE Alu -32 278 30 1595 157 24 87 chr2 148170965 148171097 -102516757 - AluJb SINE Alu -171 141 2 203 355 0 0 chr2 148171316 148171378 -102516476 - L2 LINE L2 -1 3271 3210 246 32 0 0 chr2 148171452 148171483 -102516371 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 490 345 38 30 chr2 148172403 148172638 -102515216 - MIR SINE MIR -18 244 8 267 293 30 40 chr2 148174665 148174764 -102513090 - MIR SINE MIR -150 112 15 305 274 68 34 chr2 148175089 148175206 -102512648 + MIR SINE MIR 22 142 -66 304 346 39 15 chr2 148175358 148175488 -102512366 - L2 LINE L2 -6 3266 3134 21 0 0 0 chr2 148177331 148177352 -102510502 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 148179517 148179546 -102508308 + AT_rich Low_complexity Low_complexity 1 29 0 486 219 187 0 chr2 148181305 148181428 -102506426 + MER5A DNA MER1_type 44 189 0 223 250 0 0 chr2 148181434 148181478 -102506376 + polypurine Low_complexity Low_complexity 2 45 0 258 239 15 15 chr2 148181500 148181567 -102506287 - MIR SINE MIR -40 222 156 26 30 0 0 chr2 148182054 148182087 -102505767 + AT_rich Low_complexity Low_complexity 1 33 0 269 333 11 0 chr2 148182105 148182198 -102505656 + GA-rich Low_complexity Low_complexity 1 94 0 231 36 0 0 chr2 148184032 148184060 -102503794 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 202 356 14 14 chr2 148184546 148184692 -102503162 + GA-rich Low_complexity Low_complexity 1 146 0 2007 275 36 26 chr2 148184834 148185415 -102502439 + MLT1E LTR MaLR 7 593 0 238 310 26 52 chr2 148185589 148185705 -102502149 + MIR SINE MIR 47 159 -103 22 0 0 0 chr2 148186047 148186069 -102501785 + AT_rich Low_complexity Low_complexity 1 22 0 953 215 178 49 chr2 148186069 148186474 -102501380 - LTR16A1 LTR ERVL 0 457 1 2060 132 0 0 chr2 148188925 148189214 -102498640 + AluSx SINE Alu 1 289 -23 1817 149 3 7 chr2 148192486 148192798 -102495056 - AluJo SINE Alu 0 311 1 243 292 146 0 chr2 148192817 148192913 -102494941 - L2 LINE L2 -18 3295 3186 361 180 100 50 chr2 148193812 148193912 -102493942 - MIR SINE MIR -65 197 93 901 204 103 52 chr2 148194235 148194583 -102493271 + L1MC5 LINE L1 7078 7443 -518 519 45 0 0 chr2 148194601 148194667 -102493187 + (GAAA)n Simple_repeat Simple_repeat 3 68 0 928 251 42 37 chr2 148194667 148195098 -102492756 + L1MC5 LINE L1 7497 7929 -32 300 293 64 64 chr2 148195597 148195785 -102492069 - MIR3 SINE MIR -7 201 14 196 253 48 48 chr2 148196389 148196472 -102491382 - MIR SINE MIR -156 106 24 467 275 80 0 chr2 148197054 148197192 -102490662 + MIR SINE MIR 25 173 -89 1196 181 26 0 chr2 148197239 148197465 -102490389 - MER46A DNA MER2_type 0 236 5 2470 94 0 0 chr2 148199366 148199674 -102488180 + AluSq SINE Alu 3 310 -3 481 288 29 35 chr2 148200401 148200571 -102487283 - MIR SINE MIR -74 188 20 210 91 0 0 chr2 148200866 148200899 -102486955 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 403 343 60 9 chr2 148201013 148201229 -102486625 + Charlie8 DNA MER1_type 50 276 -2141 1668 133 15 11 chr2 148201249 148201520 -102486334 - Tigger5 DNA MER2_type 0 2323 2052 1133 203 13 30 chr2 148201516 148201752 -102486102 - Tigger5 DNA MER2_type -2091 232 1 * 29 0 0 0 chr2 148206753 148206782 -102481072 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 148206847 148206868 -102480986 + AT_rich Low_complexity Low_complexity 1 21 0 198 333 0 17 chr2 148208382 148208442 -102479412 - L2 LINE L2 -9 3263 3205 1679 227 73 18 chr2 148208733 148209169 -102478685 - MLT1C LTR MaLR -7 460 1 28 47 0 31 chr2 148209279 148209318 -102478536 + AT_rich Low_complexity Low_complexity 1 39 -23 1945 134 16 22 chr2 148209318 148209632 -102478222 - AluSx SINE Alu 0 312 1 28 47 0 31 chr2 148209632 148209656 -102478198 + AT_rich Low_complexity Low_complexity 39 62 0 24 0 0 0 chr2 148210038 148210062 -102477792 + AT_rich Low_complexity Low_complexity 1 24 0 241 358 118 30 chr2 148210309 148210639 -102477215 + L3 LINE CR1 1213 1571 -6 266 322 140 14 chr2 148212789 148212932 -102474922 + MLT1I LTR MaLR 46 206 -203 1985 145 14 7 chr2 148213168 148213464 -102474390 + AluJo SINE Alu 5 302 -10 465 272 130 38 chr2 148214449 148214633 -102473221 + MIR SINE MIR 62 262 0 320 324 176 0 chr2 148215016 148215198 -102472656 + MIR SINE MIR 5 218 -44 1018 289 129 25 chr2 148215472 148216039 -102471815 + L2 LINE L2 1783 2408 -906 884 186 35 6 chr2 148216034 148216206 -102471648 + MER5A DNA MER1_type 8 184 -5 * 861 231 5 24 chr2 148216217 148216429 -102471425 - Tigger1 DNA MER2_type 0 2418 2211 3069 223 19 22 chr2 148216456 148216491 -102471363 + L1ME1 LINE L1 5431 5465 -701 1913 128 7 11 chr2 148216491 148216773 -102471081 - AluSx SINE Alu -13 299 19 3069 223 19 22 chr2 148216773 148217471 -102470383 + L1ME1 LINE L1 5465 6162 -4 22041 116 9 21 chr2 148217538 148222130 -102465724 + L1PA7 LINE L1 2 4576 -1885 7099 56 5 0 chr2 148222131 148223436 -102464418 + L1PA7 LINE L1 5149 6463 -6 10430 125 36 19 chr2 148223445 148225554 -102462300 - Tigger1 DNA MER2_type -188 2230 1 252 0 0 0 chr2 148225874 148225902 -102461952 + (CA)n Simple_repeat Simple_repeat 1 28 0 198 357 29 0 chr2 148226924 148226994 -102460860 - MIR SINE MIR -92 116 45 865 251 68 76 chr2 148227814 148228168 -102459686 + LTR40b LTR ERVL 24 374 -88 22 0 0 0 chr2 148228379 148228401 -102459453 + AT_rich Low_complexity Low_complexity 1 22 0 927 311 40 26 chr2 148229038 148229385 -102458469 + L2 LINE L2 2960 3311 -2 520 243 12 35 chr2 148230057 148230226 -102457628 + L1ME4a LINE L1 5684 5848 -273 488 303 179 9 chr2 148230524 148230742 -102457112 - MIR SINE MIR 0 262 8 189 0 0 0 chr2 148231166 148231187 -102456667 + (CAAAA)n Simple_repeat Simple_repeat 1 21 0 5995 114 4 4 chr2 148233363 148234905 -102452949 + L1PA13 LINE L1 4618 6162 -1 335 326 11 0 chr2 148235895 148235990 -102451864 + MIR3 SINE MIR 94 189 -19 232 276 17 0 chr2 148236996 148237054 -102450800 - L2 LINE L2 -4 3268 3210 333 268 0 12 chr2 148237704 148237786 -102450068 + L2 LINE L2 3139 3219 -94 520 235 188 7 chr2 148238114 148238263 -102449591 + MER5A DNA MER1_type 9 184 -5 4042 92 7 2 chr2 148238461 148239034 -102448820 + L1PB2 LINE L1 5576 6151 0 250 296 56 19 chr2 148239143 148239251 -102448603 + MIR SINE MIR 103 214 -48 3388 83 4 0 chr2 148239269 148239725 -102448129 + L1PA10 LINE L1 5702 6159 -9 21 0 0 0 chr2 148240025 148240046 -102447808 + AT_rich Low_complexity Low_complexity 1 21 0 4050 128 16 24 chr2 148241769 148241841 -102446013 + L1MC1 LINE L1 5629 5700 -633 1612 125 3 125 chr2 148241841 148242176 -102445678 + AluJb SINE Alu 1 294 -8 4050 128 16 24 chr2 148242176 148242813 -102445041 + L1MC1 LINE L1 5700 6332 -1 402 338 22 58 chr2 148243100 148243325 -102444529 - MIR SINE MIR -33 229 13 309 333 88 21 chr2 148244154 148244346 -102443508 + L2 LINE L2 2603 2807 -507 1874 137 16 29 chr2 148244688 148244995 -102442859 + AluSx SINE Alu 3 305 -7 334 339 57 0 chr2 148245250 148245374 -102442480 + L2 LINE L2 3141 3271 -1 214 369 0 0 chr2 148245377 148245442 -102442412 + polypurine Low_complexity Low_complexity 1 65 0 227 200 22 0 chr2 148248070 148248115 -102439739 + CT-rich Low_complexity Low_complexity 2 47 0 191 271 188 21 chr2 148250375 148250471 -102437383 - MIR3 SINE MIR -7 201 90 319 245 218 53 chr2 148250537 148250725 -102437129 + L1ME3A LINE L1 5944 6162 -8 27 0 0 0 chr2 148250818 148250845 -102437009 + AT_rich Low_complexity Low_complexity 1 27 0 181 404 67 0 chr2 148251045 148251149 -102436705 - MIR SINE MIR -116 146 36 740 284 115 25 chr2 148252330 148252816 -102435038 + L1ME4a LINE L1 5592 6121 0 270 136 0 0 chr2 148254280 148254324 -102433530 + (A)n Simple_repeat Simple_repeat 1 44 0 2368 95 0 0 chr2 148254707 148255011 -102432843 - AluY SINE Alu -7 304 1 395 330 170 0 chr2 148255617 148255811 -102432043 - MIR SINE MIR -15 247 21 921 199 24 0 chr2 148256007 148256258 -102431596 + FAM SINE Alu 1 119 0 255 313 45 52 chr2 148256570 148256704 -102431150 + MIR SINE MIR 15 147 -115 239 171 0 0 chr2 148256702 148256743 -102431111 - L2 LINE L2 0 3313 3273 * 224 304 146 52 chr2 148256852 148257161 -102430693 - L2 LINE L2 -630 2684 2347 189 386 32 41 chr2 148257284 148257504 -102430350 - L2 LINE L2 -2519 795 578 22 0 0 0 chr2 148259792 148259814 -102428040 + AT_rich Low_complexity Low_complexity 1 22 0 366 218 128 45 chr2 148261267 148261400 -102426454 - MIR SINE MIR -49 213 70 227 339 0 0 chr2 148261580 148261645 -102426209 - tRNA-Ile-ATT tRNA tRNA -3 74 10 22 35 0 0 chr2 148261858 148261887 -102425967 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 148263493 148263521 -102424333 + AT_rich Low_complexity Low_complexity 1 28 0 216 97 0 0 chr2 148263637 148263668 -102424186 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 396 281 16 91 chr2 148265147 148265389 -102422465 - L2 LINE L2 -1 3312 3089 242 301 229 26 chr2 148265525 148265791 -102422063 - L2 LINE L2 -357 2957 2638 244 317 40 0 chr2 148265813 148265914 -102421940 - L2 LINE L2 -830 2484 2380 2478 65 0 0 chr2 148266109 148266418 -102421436 - AluY SINE Alu -1 310 2 2330 96 3 3 chr2 148266779 148267092 -102420762 + AluSq SINE Alu 1 313 0 409 303 29 87 chr2 148267165 148267442 -102420412 + MIR SINE MIR 2 262 0 198 0 0 0 chr2 148269487 148269509 -102418345 + (A)n Simple_repeat Simple_repeat 1 22 0 521 161 25 51 chr2 148269922 148270040 -102417814 + L2 LINE L2 3198 3312 -1 23 0 0 0 chr2 148270505 148270528 -102417326 + AT_rich Low_complexity Low_complexity 1 23 0 260 253 63 21 chr2 148270738 148270833 -102417021 + L3b LINE CR1 1156 1254 -329 219 103 0 0 chr2 148270905 148270944 -102416910 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 223 333 0 0 chr2 148272101 148272161 -102415693 - MIR SINE MIR -3 259 200 250 173 19 0 chr2 148272772 148272824 -102415030 + (CA)n Simple_repeat Simple_repeat 2 54 0 456 19 0 0 chr2 148275085 148275138 -102412716 + (CA)n Simple_repeat Simple_repeat 2 54 0 340 288 112 0 chr2 148278650 148278775 -102409079 - MIR3 SINE MIR -3 205 67 245 161 143 0 chr2 148279274 148279330 -102408524 - MIR SINE MIR -71 137 74 562 326 68 78 chr2 148280049 148280240 -102407614 + L2 LINE L2 2559 2750 -522 1259 116 16 112 chr2 148280240 148280298 -102407556 - MER20 DNA MER1_type 0 219 157 1897 163 7 0 chr2 148280298 148280598 -102407256 - AluJb SINE Alu -9 303 2 1259 116 16 112 chr2 148280598 148280781 -102407073 - MER20 DNA MER1_type -62 157 1 562 326 68 78 chr2 148280781 148281082 -102406772 + L2 LINE L2 2750 3050 -222 2293 70 3 27 chr2 148281082 148281381 -102406473 + AluSc SINE Alu 1 292 -17 562 326 68 78 chr2 148281381 148281599 -102406255 + L2 LINE L2 3050 3269 -3 275 350 117 21 chr2 148281740 148281980 -102405874 - L2 LINE L2 -558 2756 2494 333 0 0 0 chr2 148282127 148282164 -102405690 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 701 191 0 23 chr2 148282167 148282298 -102405556 - AluJb SINE Alu -48 264 137 210 172 30 40 chr2 148282760 148282859 -102404995 + (TTTAA)n Simple_repeat Simple_repeat 1 98 0 242 231 19 0 chr2 148284367 148284419 -102403435 - L2 LINE L2 0 3313 3261 625 341 44 12 chr2 148284652 148284901 -102402953 + MIR SINE MIR 5 261 -1 233 262 131 41 chr2 148285105 148285227 -102402627 - LTR16C LTR ERVL 0 491 359 423 135 19 96 chr2 148286259 148286363 -102401491 + MER53 DNA DNA 94 189 0 986 24 32 0 chr2 148289442 148289565 -102398289 + L1PA4 LINE L1 6025 6151 -4 338 332 119 10 chr2 148290894 148291087 -102396767 + MIR SINE MIR 49 262 0 41 0 0 0 chr2 148291668 148291709 -102396145 + AT_rich Low_complexity Low_complexity 1 41 0 2159 138 6 0 chr2 148291811 148292122 -102395732 + AluSq SINE Alu 1 313 0 852 163 62 22 chr2 148293513 148293691 -102394163 + L1MB2 LINE L1 5980 6164 -7 2471 69 3 0 chr2 148293904 148294208 -102393646 + AluSc SINE Alu 1 305 -4 382 319 38 13 chr2 148295821 148295978 -102391876 - MIR3 SINE MIR -1 207 47 377 307 131 7 chr2 148296018 148296171 -102391683 - MIR SINE MIR -36 226 55 507 178 0 0 chr2 148296198 148296299 -102391555 + GA-rich Low_complexity Low_complexity 1 101 0 21 36 0 0 chr2 148296393 148296421 -102391433 + AT_rich Low_complexity Low_complexity 1 28 0 251 327 36 27 chr2 148297422 148297532 -102390322 - L2 LINE L2 -1 3271 3161 2101 110 13 10 chr2 148297617 148297925 -102389929 - AluY SINE Alu -2 309 1 1651 165 9 56 chr2 148298886 148299011 -102388843 + AluJo SINE Alu 1 130 -182 3704 95 12 2 chr2 148299011 148299170 -102388684 + L1PB1 LINE L1 5628 5784 -367 378 0 0 0 chr2 148299170 148299212 -102388642 + (CA)n Simple_repeat Simple_repeat 2 43 0 3704 95 12 2 chr2 148299212 148299570 -102388284 + L1PB1 LINE L1 5784 6150 -1 1651 165 9 56 chr2 148299570 148299766 -102388088 + AluJo SINE Alu 130 307 -5 450 36 0 0 chr2 148300661 148300717 -102387137 + (CA)n Simple_repeat Simple_repeat 1 56 0 205 238 202 24 chr2 148301144 148301228 -102386626 - L2 LINE L2 -1 3271 3173 371 339 0 0 chr2 148301289 148301404 -102386450 - L3b LINE CR1 -218 1365 1251 488 276 24 0 chr2 148303618 148303745 -102384109 - MER94 DNA DNA 0 134 5 1269 181 58 15 chr2 148303746 148304121 -102383733 - AluJo SINE Alu 0 426 41 300 310 69 26 chr2 148304213 148304329 -102383525 + L2 LINE L2 3136 3256 -16 8439 165 23 5 chr2 148304334 148305735 -102382119 + ERVL LTR ERVL 2674 4099 -1665 732 288 98 12 chr2 148305735 148306061 -102381793 + L2 LINE L2 2960 3313 0 1575 121 140 4 chr2 148306161 148306302 -102381552 - AluSx SINE Alu -1 301 181 252 0 0 0 chr2 148306302 148306330 -102381524 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1575 121 140 4 chr2 148306330 148306453 -102381401 - AluSx SINE Alu -121 181 1 24 32 0 0 chr2 148307613 148307644 -102380210 + AT_rich Low_complexity Low_complexity 1 31 0 231 272 49 0 chr2 148307926 148308007 -102379847 + MIR SINE MIR 101 185 -77 801 192 7 7 chr2 148308016 148308167 -102379687 + AluJo SINE Alu 1 151 -161 289 285 108 39 chr2 148310623 148310753 -102377101 - MIR3 SINE MIR -29 179 41 263 250 125 0 chr2 148310768 148310840 -102377014 + MIR3 SINE MIR 123 203 -5 1650 136 0 0 chr2 148311683 148311918 -102375936 + AluSx SINE Alu 19 253 -59 339 25 0 0 chr2 148311937 148311977 -102375877 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 347 355 86 14 chr2 148312224 148312444 -102375410 + MIR SINE MIR 19 254 -8 461 308 108 14 chr2 148312519 148312733 -102375121 + MIR SINE MIR 23 256 -6 2422 77 3 0 chr2 148313010 148313309 -102374545 + AluSp SINE Alu 1 300 -13 3247 185 20 42 chr2 148313318 148314073 -102373781 + L1MB7 LINE L1 5445 6182 -2 26 0 0 0 chr2 148314097 148314123 -102373731 + AT_rich Low_complexity Low_complexity 1 26 0 444 291 8 0 chr2 148314518 148314645 -102373209 + MIR SINE MIR 132 259 -3 228 222 0 0 chr2 148315200 148315245 -102372609 + (CA)n Simple_repeat Simple_repeat 2 46 0 363 290 0 10 chr2 148316104 148316204 -102371650 + MER81 DNA DNA 15 113 -1 24 32 0 0 chr2 148316265 148316296 -102371558 + AT_rich Low_complexity Low_complexity 1 31 0 372 272 109 27 chr2 148317848 148317995 -102369859 - MIR SINE MIR -70 192 34 2390 85 0 7 chr2 148318197 148318503 -102369351 + AluSg SINE Alu 2 305 -5 1976 164 3 0 chr2 148318516 148318826 -102369028 + AluJb SINE Alu 2 312 0 252 358 142 0 chr2 148319908 148320028 -102367826 + L2 LINE L2 3136 3272 0 1963 122 29 0 chr2 148320527 148320907 -102366947 + AluSg SINE Alu 1 281 -29 228 256 0 24 chr2 148321484 148321566 -102366288 + MIR SINE MIR 137 216 -46 543 360 176 13 chr2 148321801 148322187 -102365667 - L2 LINE L2 0 3272 2824 1911 132 3 7 chr2 148322213 148322500 -102365354 + L1PB2 LINE L1 5865 6150 -1 22 0 0 0 chr2 148322501 148322523 -102365331 + AT_rich Low_complexity Low_complexity 1 22 0 629 297 67 59 chr2 148322808 148322872 -102364982 - L2 LINE L2 -552 2762 2700 3693 111 37 8 chr2 148322872 148323384 -102364470 - MER1A DNA MER1_type 0 527 1 629 297 67 59 chr2 148323384 148323780 -102364074 - L2 LINE L2 -614 2700 2298 326 286 0 0 chr2 148324947 148325024 -102362830 - L2 LINE L2 0 3272 3196 1849 125 0 14 chr2 148327375 148327664 -102360190 + AluSx SINE Alu 1 285 -27 27 29 0 0 chr2 148327664 148327698 -102360156 + AT_rich Low_complexity Low_complexity 1 34 0 336 175 42 28 chr2 148327884 148328027 -102359827 + (GTGTG)n Simple_repeat Simple_repeat 2 146 0 191 60 80 0 chr2 148328045 148328095 -102359759 + (GTGTG)n Simple_repeat Simple_repeat 2 55 0 247 309 73 18 chr2 148329943 148330053 -102357801 + MIR SINE MIR 57 172 -90 519 258 124 46 chr2 148330314 148330531 -102357323 - MIR SINE MIR 0 262 29 2328 97 0 3 chr2 148331456 148331756 -102356098 - AluSx SINE Alu -13 299 1 490 152 9 18 chr2 148332078 148332190 -102355664 + GA-rich Low_complexity Low_complexity 4 114 0 213 231 0 0 chr2 148332415 148332454 -102355400 + polypurine Low_complexity Low_complexity 3 41 0 237 108 0 0 chr2 148333015 148333052 -102354802 + (GA)n Simple_repeat Simple_repeat 2 38 0 198 0 0 0 chr2 148333201 148333223 -102354631 + (A)n Simple_repeat Simple_repeat 1 22 0 25 51 0 0 chr2 148335293 148335332 -102352522 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 148336136 148336157 -102351697 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 148336928 148336957 -102350897 + AT_rich Low_complexity Low_complexity 1 29 0 396 0 0 0 chr2 148337278 148337322 -102350532 + (TC)n Simple_repeat Simple_repeat 1 44 0 224 210 33 33 chr2 148337669 148337737 -102350117 + MIR SINE MIR 77 145 -63 2155 97 3 44 chr2 148338471 148338790 -102349064 - AluSg SINE Alu -4 306 1 250 356 29 0 chr2 148338821 148338925 -102348929 - MIR SINE MIR -153 109 3 287 303 84 14 chr2 148339464 148339606 -102348248 + MIR SINE MIR 76 227 -35 318 324 56 7 chr2 148340840 148340982 -102346872 - MIR SINE MIR -61 201 53 31 26 0 0 chr2 148342272 148342310 -102345544 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 148345219 148345243 -102342611 + AT_rich Low_complexity Low_complexity 1 24 0 182 36 0 36 chr2 148347446 148347474 -102340380 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 27 29 0 0 chr2 148350716 148350750 -102337104 + GC_rich Low_complexity Low_complexity 1 34 0 260 190 13 51 chr2 148350826 148350905 -102336949 + C-rich Low_complexity Low_complexity 1 76 0 222 128 0 0 chr2 148351741 148351780 -102336074 + (GA)n Simple_repeat Simple_repeat 2 40 0 207 0 0 0 chr2 148352302 148352325 -102335529 + (TC)n Simple_repeat Simple_repeat 2 24 0 231 114 0 0 chr2 148352331 148352366 -102335488 + (TG)n Simple_repeat Simple_repeat 2 36 0 252 86 0 0 chr2 148352571 148352606 -102335248 + (TC)n Simple_repeat Simple_repeat 2 36 0 372 43 0 0 chr2 148357389 148357435 -102330419 + (GA)n Simple_repeat Simple_repeat 2 47 0 290 98 20 0 chr2 148358479 148358530 -102329324 + (CA)n Simple_repeat Simple_repeat 1 52 0 180 97 0 0 chr2 148364013 148364044 -102323810 + (T)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr2 148368845 148368866 -102318988 + AT_rich Low_complexity Low_complexity 1 21 0 576 170 11 0 chr2 148369212 148369306 -102318548 - FRAM SINE Alu -24 152 58 248 144 46 8 chr2 148369964 148370109 -102317745 + (TA)n Simple_repeat Simple_repeat 1 150 0 247 316 86 86 chr2 148370528 148370971 -102316883 - L2 LINE L2 -18 3254 2812 502 291 0 26 chr2 148371114 148371265 -102316589 - MIR SINE MIR -8 254 108 188 83 0 56 chr2 148372979 148373015 -102314839 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 2654 33 0 3 chr2 148373761 148374068 -102313786 - AluY SINE Alu -5 306 1 556 279 93 35 chr2 148374418 148374644 -102313210 + MIR SINE MIR 20 258 -4 207 0 0 0 chr2 148375219 148375242 -102312612 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 306 330 227 5 chr2 148375336 148375521 -102312333 + MIR SINE MIR 20 245 -17 209 233 0 0 chr2 148377552 148377595 -102310259 + (TAA)n Simple_repeat Simple_repeat 2 44 0 458 257 273 0 chr2 148377602 148377789 -102310065 - MIR SINE MIR -12 250 13 188 234 21 0 chr2 148377860 148377907 -102309947 - MIR SINE MIR -124 138 91 299 180 315 0 chr2 148378832 148378921 -102308933 + L1MB1 LINE L1 6052 6168 0 336 24 0 0 chr2 148379236 148379277 -102308577 + (CA)n Simple_repeat Simple_repeat 1 41 0 203 245 38 0 chr2 148380429 148380482 -102307372 + T-rich Low_complexity Low_complexity 5 59 0 22 0 0 0 chr2 148381356 148381378 -102306476 + AT_rich Low_complexity Low_complexity 1 22 0 2123 130 3 0 chr2 148382021 148382329 -102305525 + AluSx SINE Alu 1 309 -3 363 269 17 25 chr2 148383657 148383776 -102304078 + MIR3 SINE MIR 37 154 -54 627 244 105 0 chr2 148383776 148383876 -102303978 + Charlie8 DNA MER1_type 1 89 -2328 252 0 0 0 chr2 148383876 148383904 -102303950 + (CA)n Simple_repeat Simple_repeat 1 28 0 627 244 105 0 chr2 148383904 148383975 -102303879 + Charlie8 DNA MER1_type 89 190 -2227 235 171 0 0 chr2 148384026 148384067 -102303787 + Charlie8 DNA MER1_type 1375 1415 -1002 326 295 50 79 chr2 148384711 148384913 -102302941 - MIR SINE MIR -65 143 1 429 20 0 0 chr2 148384922 148384972 -102302882 + (TG)n Simple_repeat Simple_repeat 2 51 0 184 151 19 38 chr2 148386941 148386994 -102300860 + T-rich Low_complexity Low_complexity 1 52 0 186 43 0 0 chr2 148387340 148387363 -102300491 + (T)n Simple_repeat Simple_repeat 1 23 0 261 180 0 0 chr2 148392576 148392626 -102295228 + (TA)n Simple_repeat Simple_repeat 2 51 0 685 149 9 0 chr2 148394548 148394655 -102293199 + FLAM_C SINE Alu 18 125 -18 193 322 98 45 chr2 148394752 148394997 -102292857 + L2 LINE L2 2333 2590 -724 474 204 239 17 chr2 148395431 148395607 -102292247 + MIR SINE MIR 46 260 -2 344 59 20 0 chr2 148395848 148395899 -102291955 + (ATG)n Simple_repeat Simple_repeat 3 54 0 190 234 43 0 chr2 148399082 148399129 -102288725 + L2 LINE L2 3263 3311 -2 201 296 133 44 chr2 148402748 148402883 -102284971 - L2 LINE L2 0 3272 3126 2125 137 0 13 chr2 148404148 148404547 -102283307 - AluJb SINE Alu 0 395 1 226 24 71 24 chr2 148405660 148405702 -102282152 + T-rich Low_complexity Low_complexity 2 45 0 189 107 0 0 chr2 148406982 148407010 -102280844 + (A)n Simple_repeat Simple_repeat 1 28 0 216 211 19 0 chr2 148407697 148407749 -102280105 + GA-rich Low_complexity Low_complexity 3 55 0 234 62 0 0 chr2 148409932 148409964 -102277890 + (TG)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr2 148410358 148410379 -102277475 + AT_rich Low_complexity Low_complexity 1 21 0 318 261 44 100 chr2 148410686 148410866 -102276988 + MIR SINE MIR 21 190 -72 203 86 0 29 chr2 148412320 148412355 -102275499 + (GA)n Simple_repeat Simple_repeat 1 34 0 228 35 0 0 chr2 148417325 148417354 -102270500 + (TA)n Simple_repeat Simple_repeat 1 29 0 195 42 0 0 chr2 148418678 148418702 -102269152 + (T)n Simple_repeat Simple_repeat 1 24 0 1811 173 30 0 chr2 148422212 148422507 -102265347 - AluJo SINE Alu -8 304 1 378 270 10 0 chr2 148423315 148423415 -102264439 + MIR SINE MIR 45 145 -63 26 30 0 0 chr2 148429768 148429801 -102258053 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr2 148431821 148431845 -102256009 + AT_rich Low_complexity Low_complexity 1 24 0 502 324 17 22 chr2 148434195 148434374 -102253480 + MIR3 SINE MIR 19 196 -12 2159 92 0 3 chr2 148434986 148435315 -102252539 - AluSx SINE Alu 0 328 1 238 320 13 13 chr2 148435668 148435743 -102252111 - L2 LINE L2 -673 2641 2567 215 326 35 12 chr2 148436763 148436849 -102251005 + L2 LINE L2 2420 2507 -807 191 192 0 77 chr2 148437324 148437376 -102250478 + MIR SINE MIR 123 170 -92 878 163 34 0 chr2 148437439 148437586 -102250268 + FRAM SINE Alu 1 151 -25 210 37 0 0 chr2 148437723 148437750 -102250104 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 21 0 0 0 chr2 148438029 148438050 -102249804 + AT_rich Low_complexity Low_complexity 1 21 0 369 359 64 13 chr2 148438647 148438803 -102249051 + MIR SINE MIR 27 190 -72 31 26 0 0 chr2 148438810 148438848 -102249006 + AT_rich Low_complexity Low_complexity 1 38 0 1311 81 54 0 chr2 148438853 148439039 -102248815 - L1PB1 LINE L1 0 6151 5956 2345 96 3 0 chr2 148439114 148439426 -102248428 - AluSq SINE Alu 0 313 1 1464 174 42 19 chr2 148439852 148440163 -102247691 - L1MA6 LINE L1 -4 6296 5979 1502 107 22 0 chr2 148440163 148440388 -102247466 + L1MA6 LINE L1 5734 5963 -337 261 289 70 35 chr2 148440655 148440769 -102247085 - L2 LINE L2 -2 3311 3194 190 358 15 0 chr2 148440804 148440871 -102246983 + MIR SINE MIR 195 262 0 199 325 26 0 chr2 148441798 148441875 -102245979 - L2 LINE L2 -2561 753 675 201 171 0 0 chr2 148442114 148442149 -102245705 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 199 438 17 6 chr2 148442159 148442335 -102245519 - L2 LINE L2 -2800 514 337 21 57 0 0 chr2 148442812 148442847 -102245007 + AT_rich Low_complexity Low_complexity 1 35 0 264 100 0 0 chr2 148442849 148442889 -102244965 + (CA)n Simple_repeat Simple_repeat 2 41 0 461 347 7 7 chr2 148443090 148443240 -102244614 + MIR3 SINE MIR 10 159 -49 924 175 41 0 chr2 148443375 148443546 -102244308 + MER45A DNA AcHobo 1 178 0 215 65 0 0 chr2 148444522 148444553 -102243301 - L2 LINE L2 -1 3312 3282 296 311 75 28 chr2 148444741 148444847 -102243007 - MIR3 SINE MIR -9 199 89 277 351 105 0 chr2 148444878 148444992 -102242862 - L2 LINE L2 -6 3266 3141 538 223 243 0 chr2 148445196 148445344 -102242510 - MER5A DNA MER1_type -5 184 1 2360 80 3 0 chr2 148445546 148445845 -102242009 - AluSp SINE Alu -13 300 1 234 0 0 0 chr2 148446683 148446709 -102241145 + (TG)n Simple_repeat Simple_repeat 2 27 0 417 95 0 0 chr2 148446727 148446790 -102241064 + (TA)n Simple_repeat Simple_repeat 1 63 0 250 276 66 13 chr2 148446855 148446931 -102240923 + L2 LINE L2 3234 3313 0 2389 75 7 0 chr2 148447624 148447919 -102239935 + AluY SINE Alu 1 297 -14 1248 162 29 5 chr2 148447926 148448136 -102239718 - AluJb SINE Alu -13 299 85 243 241 60 12 chr2 148448601 148448684 -102239170 - MLT1K LTR MaLR -7 581 495 253 333 0 0 chr2 148449580 148449661 -102238193 - L2 LINE L2 -3 3310 3230 434 348 68 49 chr2 148450898 148451309 -102236545 + L2 LINE L2 2534 2952 -362 22 56 0 0 chr2 148452499 148452535 -102235319 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr2 148454446 148454470 -102233384 + AT_rich Low_complexity Low_complexity 1 24 0 2018 143 0 0 chr2 148459894 148460188 -102227666 + AluSx SINE Alu 4 297 -15 21 0 0 0 chr2 148460735 148460756 -102227098 + AT_rich Low_complexity Low_complexity 1 21 0 2057 146 0 10 chr2 148462533 148462842 -102225012 + AluJo SINE Alu 1 306 -6 23 33 0 0 chr2 148463287 148463317 -102224537 + AT_rich Low_complexity Low_complexity 1 30 0 2082 110 4 0 chr2 148463611 148463923 -102223931 + AluSx SINE Alu 1 313 0 374 337 102 15 chr2 148465812 148466008 -102221846 - MIR SINE MIR -8 254 42 21 36 0 0 chr2 148469544 148469572 -102218282 + AT_rich Low_complexity Low_complexity 1 28 0 230 296 0 0 chr2 148470750 148470804 -102217050 + (TA)n Simple_repeat Simple_repeat 1 54 0 224 228 0 18 chr2 148474065 148474122 -102213732 + (TG)n Simple_repeat Simple_repeat 2 57 0 237 250 19 0 chr2 148475389 148475441 -102212413 - MIR3 SINE MIR -45 163 111 384 275 101 7 chr2 148476119 148476257 -102211597 - MIR3 SINE MIR -15 193 43 317 343 62 20 chr2 148476391 148476537 -102211317 - L2 LINE L2 -19 3253 3102 779 305 59 33 chr2 148476625 148477128 -102210726 - L2 LINE L2 -5 3308 2795 1869 195 57 35 chr2 148478883 148479340 -102208514 + MLT1C LTR MaLR 1 467 0 521 322 148 37 chr2 148480584 148481211 -102206643 + L2 LINE L2 1962 2658 -656 223 272 96 66 chr2 148481551 148481687 -102206167 + L2 LINE L2 3173 3312 -1 192 393 81 12 chr2 148481692 148481865 -102205989 + L2 LINE L2 2707 2891 -423 1149 35 17 23 chr2 148481868 148482042 -102205812 + (TTTC)n Simple_repeat Simple_repeat 4 176 0 940 35 21 21 chr2 148482159 148482302 -102205552 + (TTTC)n Simple_repeat Simple_repeat 1 143 0 2197 101 3 13 chr2 148482326 148482624 -102205230 - AluSg SINE Alu -15 295 1 1639 150 41 61 chr2 148482636 148482929 -102204925 - AluJo SINE Alu -25 287 1 192 211 96 0 chr2 148484625 148484677 -102203177 + MIR3 SINE MIR 123 179 -29 673 286 34 0 chr2 148484759 148484937 -102202917 + MIR SINE MIR 19 202 -60 234 274 27 14 chr2 148486053 148486126 -102201728 - L2 LINE L2 -2 3270 3197 21 36 0 0 chr2 148486412 148486440 -102201414 + AT_rich Low_complexity Low_complexity 1 28 0 202 203 16 16 chr2 148487762 148487826 -102200028 + CT-rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr2 148488180 148488202 -102199652 + AT_rich Low_complexity Low_complexity 1 22 0 533 55 14 0 chr2 148488414 148488487 -102199367 + (GA)n Simple_repeat Simple_repeat 2 75 0 24 53 0 0 chr2 148488760 148488798 -102199056 + AT_rich Low_complexity Low_complexity 1 38 0 257 345 45 0 chr2 148488925 148489035 -102198819 - MLT1K LTR MaLR -454 134 20 374 331 28 21 chr2 148489668 148489813 -102198041 + MIR3 SINE MIR 21 166 -42 946 263 97 63 chr2 148489946 148490536 -102197318 + MLT1L LTR MaLR 6 615 0 268 318 0 60 chr2 148490689 148490840 -102197014 - L2 LINE L2 -9 3304 3163 2022 154 3 7 chr2 148491478 148491784 -102196070 + AluSx SINE Alu 1 305 -7 620 303 47 39 chr2 148491785 148492019 -102195835 + MIR SINE MIR 1 236 -26 448 140 0 21 chr2 148493353 148493365 -102194489 + (GGAA)n Simple_repeat Simple_repeat 2 13 -79 1493 199 0 35 chr2 148493365 148493676 -102194178 + AluJb SINE Alu 1 300 -12 448 140 0 21 chr2 148493676 148493756 -102194098 + (GGAA)n Simple_repeat Simple_repeat 13 92 0 2229 147 0 0 chr2 148493756 148494068 -102193786 + AluSx SINE Alu 1 312 0 405 256 32 32 chr2 148494087 148494212 -102193642 - MER5A DNA MER1_type -28 161 37 407 119 0 0 chr2 148494481 148494540 -102193314 + AluS SINE Alu 1 59 -251 434 48 0 0 chr2 148494640 148494703 -102193151 + AluSc SINE Alu 241 303 -6 2169 115 0 7 chr2 148494801 148495096 -102192758 - AluSg SINE Alu -17 293 1 1041 72 0 0 chr2 148495878 148496017 -102191837 + (GGAA)n Simple_repeat Simple_repeat 1 139 0 321 350 44 0 chr2 148496019 148496156 -102191698 - LTR16A LTR ERVL -115 335 193 1911 140 0 3 chr2 148496266 148496559 -102191295 + AluSx SINE Alu 1 292 -20 1998 127 0 7 chr2 148497265 148497583 -102190271 + AluSx SINE Alu 1 316 0 25 0 0 0 chr2 148500014 148500039 -102187815 + AT_rich Low_complexity Low_complexity 1 25 0 182 310 69 35 chr2 148500343 148500401 -102187453 - L2 LINE L2 -50 3222 3163 2171 102 0 7 chr2 148500416 148500711 -102187143 + AluSq SINE Alu 1 293 -20 350 264 101 31 chr2 148501060 148501189 -102186665 - MIR SINE MIR -105 157 20 822 280 97 3 chr2 148501260 148501549 -102186305 - MLT1I LTR MaLR -14 395 80 1310 156 16 53 chr2 148502411 148502654 -102185200 + AluJb SINE Alu 66 299 -13 697 183 102 0 chr2 148503081 148503278 -102184576 + Charlie1 DNA MER1_type 2540 2756 -5 389 255 49 0 chr2 148503423 148503525 -102184329 + L2 LINE L2 3146 3252 -20 2197 108 0 3 chr2 148503540 148503835 -102184019 + AluSq SINE Alu 1 294 -19 590 260 31 31 chr2 148504025 148504221 -102183633 - MIR SINE MIR -10 252 57 317 318 20 74 chr2 148504727 148504756 -102183098 + MIR3 SINE MIR 21 50 -158 1816 77 0 0 chr2 148504756 148504976 -102182878 + AluSg/x SINE Alu 85 304 -8 317 318 20 74 chr2 148504976 148505094 -102182760 + MIR3 SINE MIR 50 160 -48 595 280 27 27 chr2 148505247 148505472 -102182382 - L1MC4a LINE L1 -1878 5930 5706 245 348 58 51 chr2 148505711 148505849 -102182005 + L2 LINE L2 3128 3266 -6 241 250 78 0 chr2 148506071 148506135 -102181719 + MER91C DNA MER1_type 36 104 -36 32 43 0 0 chr2 148508513 148508559 -102179295 + AT_rich Low_complexity Low_complexity 1 46 0 31 26 0 0 chr2 148508671 148508709 -102179145 + AT_rich Low_complexity Low_complexity 1 38 0 26 30 0 0 chr2 148508777 148508810 -102179044 + AT_rich Low_complexity Low_complexity 1 33 0 736 232 28 23 chr2 148509824 148510001 -102177853 - MER5B DNA MER1_type 0 178 1 286 221 0 26 chr2 148510198 148510275 -102177579 + MLT1K LTR MaLR 509 583 -5 316 347 90 61 chr2 148510367 148511037 -102176817 - L2 LINE L2 -30 3242 2554 1267 82 0 11 chr2 148511141 148511325 -102176529 + MER4A LTR ERV1 1 182 -482 687 168 0 0 chr2 148511325 148511444 -102176410 - AluJb SINE Alu -1 311 193 1807 108 28 53 chr2 148511445 148511973 -102175881 + MER4A LTR ERV1 165 662 -2 236 276 79 13 chr2 148511986 148512062 -102175792 - MER2 DNA MER2_type 0 345 265 930 96 7 22 chr2 148512083 148512218 -102175636 - FLAM_C SINE Alu 0 133 1 960 154 11 6 chr2 148512218 148512393 -102175461 - MER2 DNA MER2_type -169 176 1 2271 118 0 0 chr2 148513217 148513522 -102174332 - AluSc SINE Alu -4 305 1 2148 117 0 0 chr2 148515026 148515343 -102172511 - AluSx SINE Alu 0 318 2 1614 182 20 0 chr2 148517108 148517404 -102170450 + AluSx SINE Alu 1 302 -10 2043 104 17 30 chr2 148520104 148520403 -102167451 + AluSc SINE Alu 1 295 -14 2123 86 61 0 chr2 148520862 148521142 -102166712 - AluSx SINE Alu -15 297 1 640 318 145 18 chr2 148521197 148521468 -102166386 + L2 LINE L2 2824 3059 -254 2556 50 0 7 chr2 148521468 148521768 -102166086 - AluY SINE Alu -13 298 1 640 318 145 18 chr2 148521768 148521930 -102165924 + L2 LINE L2 3059 3312 -1 194 384 12 0 chr2 148522064 148522150 -102165704 + L2 LINE L2 3179 3265 -48 388 224 28 47 chr2 148523441 148523548 -102164306 + MIR SINE MIR 36 140 -122 21 57 0 0 chr2 148523613 148523648 -102164206 + AT_rich Low_complexity Low_complexity 1 35 0 356 194 0 0 chr2 148523694 148523766 -102164088 + Tigger5 DNA MER2_type 2251 2322 -1 322 167 0 42 chr2 148523784 148523856 -102163998 - Tigger5 DNA MER2_type -2235 88 20 484 174 0 0 chr2 148523869 148523955 -102163899 + Tigger5 DNA MER2_type 2237 2322 -1 363 301 124 83 chr2 148525246 148525557 -102162297 - L1M2 LINE L1 -5612 1237 893 189 0 0 0 chr2 148525557 148525578 -102162276 + (GGA)n Simple_repeat Simple_repeat 3 23 0 363 301 124 83 chr2 148525578 148525807 -102162047 - L1M2 LINE L1 -5956 893 675 199 326 79 0 chr2 148527088 148527177 -102160677 - MIR3 SINE MIR -2 206 111 1527 129 184 7 chr2 148527574 148527868 -102159986 - MER7A DNA MER2_type -1 345 2 1665 153 63 11 chr2 148528746 148529033 -102158821 - AluSg SINE Alu -8 302 1 191 308 122 70 chr2 148529646 148529759 -102158095 - L3b LINE CR1 -9 1574 1447 2044 117 4 0 chr2 148529759 148530064 -102157790 + AluSx SINE Alu 1 306 0 191 308 122 70 chr2 148530064 148530103 -102157751 - L3b LINE CR1 -136 1447 1411 1280 162 123 4 chr2 148530635 148531071 -102156783 - MER21B LTR ERV1 -291 572 27 195 350 113 10 chr2 148531165 148531262 -102156592 + L2 LINE L2 3137 3243 -29 2536 60 0 0 chr2 148531402 148531704 -102156150 - AluY SINE Alu -9 302 1 207 289 67 48 chr2 148533451 148533555 -102154299 + MIR SINE MIR 40 145 -117 250 276 75 82 chr2 148533812 148533946 -102153908 + MIR SINE MIR 9 141 -67 526 203 62 16 chr2 148534085 148534213 -102153641 + MIR SINE MIR 80 213 -49 5621 196 44 25 chr2 148534367 148535789 -102152065 + Charlie1a DNA MER1_type 2 1450 -5 1583 143 4 21 chr2 148536150 148536388 -102151466 + AluJo SINE Alu 49 282 -30 1294 246 9 15 chr2 148537695 148538037 -102149817 - MER58B DNA MER1_type 0 341 2 29 28 0 0 chr2 148538430 148538466 -102149388 + AT_rich Low_complexity Low_complexity 1 36 0 351 0 0 0 chr2 148539776 148539815 -102148039 + (TG)n Simple_repeat Simple_repeat 2 40 0 597 14 0 0 chr2 148540575 148540645 -102147209 + (TTCC)n Simple_repeat Simple_repeat 1 70 0 1148 191 29 0 chr2 148541761 148541965 -102145889 - AluJo SINE Alu -18 294 85 2153 129 3 0 chr2 148542825 148543128 -102144726 + AluSx SINE Alu 1 304 -8 1621 210 57 66 chr2 148543139 148543276 -102144578 - L1ME2 LINE L1 -5 6161 6024 2269 102 0 3 chr2 148543276 148543579 -102144275 - AluY SINE Alu -9 302 1 1621 210 57 66 chr2 148543579 148544091 -102143763 - L1ME2 LINE L1 -142 6024 5514 22 56 0 0 chr2 148544196 148544232 -102143622 + AT_rich Low_complexity Low_complexity 1 36 0 1749 138 52 33 chr2 148545022 148545385 -102142469 - THE1C LTR MaLR -5 370 1 810 125 0 83 chr2 148545681 148545825 -102142029 + FLAM_C SINE Alu 2 133 0 191 392 70 49 chr2 148546055 148546399 -102141455 - L2 LINE L2 -1 3271 2921 1921 269 85 47 chr2 148547112 148548115 -102139739 + L2 LINE L2 2262 3307 -6 400 250 30 18 chr2 148548228 148548245 -102139609 - L1MA10 LINE L1 0 6334 6318 2829 238 53 29 chr2 148548245 148549132 -102138722 - L1ME1 LINE L1 -5 6230 5323 289 188 16 0 chr2 148549241 148549305 -102138549 - AluYb8 SINE Alu -1 307 243 250 30 0 0 chr2 148549293 148549326 -102138528 - AluY SINE Alu -269 34 2 * 2384 217 83 102 chr2 148549328 148549546 -102138308 - L1ME1 LINE L1 -1047 5168 4947 2295 99 3 3 chr2 148549546 148549848 -102138006 + AluSg SINE Alu 1 302 -8 2384 217 83 102 chr2 148549848 148550827 -102137027 - L1ME1 LINE L1 -1268 4947 3950 2459 66 3 3 chr2 148550827 148551131 -102136723 - AluSg SINE Alu -6 304 1 2384 217 83 102 chr2 148551131 148551361 -102136493 - L1ME1 LINE L1 -2265 3950 3767 1267 205 101 12 chr2 148551361 148551698 -102136156 + MLT1A2 LTR MaLR 4 370 -4 2384 217 83 102 chr2 148551698 148551745 -102136109 - L1ME1 LINE L1 -2448 3767 3721 4708 202 108 11 chr2 148551746 148553164 -102134690 + L1M4 LINE L1 3892 5430 -750 24 32 0 0 chr2 148553189 148553220 -102134634 + AT_rich Low_complexity Low_complexity 1 31 0 638 176 0 0 chr2 148553288 148553390 -102134464 + AluSq/x SINE Alu 23 124 -189 518 253 55 19 chr2 148553449 148553706 -102134148 - L1ME1 LINE L1 -5471 925 660 357 332 89 22 chr2 148554042 148554313 -102133541 - L1ME1 LINE L1 -6049 347 59 2168 98 3 23 chr2 148554884 148555191 -102132663 - AluSx SINE Alu -10 302 2 180 234 106 0 chr2 148555350 148555397 -102132457 + L2 LINE L2 3254 3305 -8 201 94 0 0 chr2 148555749 148555781 -102132073 + (TA)n Simple_repeat Simple_repeat 1 32 0 219 232 101 29 chr2 148556112 148556181 -102131673 - L2 LINE L2 -2 3311 3238 2073 137 0 0 chr2 148556488 148556811 -102131043 + AluSx SINE Alu 1 312 0 339 287 91 49 chr2 148557477 148557620 -102130234 - L1M4 LINE L1 -416 5758 5610 33 18 0 36 chr2 148557690 148557719 -102130135 + AT_rich Low_complexity Low_complexity 1 29 -24 3503 149 54 14 chr2 148557719 148558382 -102129472 - L1MB3 LINE L1 -3 6180 5491 33 18 0 36 chr2 148558382 148558407 -102129447 + AT_rich Low_complexity Low_complexity 29 53 0 290 267 22 22 chr2 148558423 148558513 -102129341 - MIR SINE MIR 0 262 173 314 325 96 32 chr2 148559489 148559695 -102128159 - L1MC4 LINE L1 0 8042 7808 2483 58 0 0 chr2 148559695 148559988 -102127866 + AluY SINE Alu 3 295 -16 314 325 96 32 chr2 148559988 148560095 -102127759 - L1MC4 LINE L1 -234 7808 7709 2346 96 0 0 chr2 148560131 148560433 -102127421 + AluY SINE Alu 1 302 -9 268 133 0 0 chr2 148560445 148560490 -102127364 - Alu SINE Alu -257 45 1 325 154 88 22 chr2 148560779 148560870 -102126984 + L1MC5 LINE L1 7817 7913 -48 21 36 0 0 chr2 148561060 148561088 -102126766 + AT_rich Low_complexity Low_complexity 1 28 0 1763 170 48 3 chr2 148562111 148562405 -102125449 + AluJb SINE Alu 1 307 -5 438 231 29 19 chr2 148562572 148562676 -102125178 - L2 LINE L2 0 3313 3209 373 326 133 32 chr2 148563025 148563341 -102124513 - L3 LINE CR1 -10 1567 1220 186 43 0 0 chr2 148563383 148563406 -102124448 + (CA)n Simple_repeat Simple_repeat 2 24 0 337 298 194 40 chr2 148563514 148563762 -102124092 - L2 LINE L2 -54 3218 2933 192 371 108 16 chr2 148565589 148565783 -102122071 - L2 LINE L2 -230 3042 2831 359 248 92 28 chr2 148565913 148566022 -102121832 - MIR SINE MIR -96 166 51 196 301 106 57 chr2 148566138 148566261 -102121593 - L2 LINE L2 -664 2650 2522 2032 174 57 35 chr2 148566689 148567144 -102120710 + MLT1C LTR MaLR 1 465 -2 941 256 140 44 chr2 148567156 148567725 -102120129 - L2 LINE L2 -217 3096 2483 2052 127 19 70 chr2 148567725 148568142 -102119712 - MER57A LTR ERV1 -7 396 1 891 206 6 3 chr2 148568152 148568407 -102119447 - L1M4 LINE L1 -3855 2527 2272 2110 97 30 10 chr2 148568685 148568985 -102118869 + AluY SINE Alu 1 306 -5 217 273 159 0 chr2 148569112 148569200 -102118654 - L2 LINE L2 -4 3309 3208 2197 71 0 54 chr2 148569844 148570178 -102117676 + AluSc SINE Alu 2 319 0 2467 47 3 13 chr2 148570556 148570856 -102116998 - AluY SINE Alu -14 297 1 484 296 31 0 chr2 148571674 148571836 -102116018 - MLT1G1 LTR MaLR 0 595 429 504 296 57 26 chr2 148571905 148572169 -102115685 - MLT1G1 LTR MaLR -311 284 13 488 231 112 7 chr2 148572460 148572603 -102115251 + MIR SINE MIR 50 207 -55 1103 172 6 0 chr2 148572876 148573056 -102114798 - AluJb SINE Alu 0 312 132 189 0 0 0 chr2 148573056 148573077 -102114777 + (A)n Simple_repeat Simple_repeat 1 21 0 805 242 28 6 chr2 148573082 148573260 -102114594 - AluJo SINE Alu -130 182 1 21 57 0 0 chr2 148573385 148573420 -102114434 + AT_rich Low_complexity Low_complexity 1 35 0 342 233 196 16 chr2 148573439 148573628 -102114226 - L1ME4a LINE L1 -62 6059 5837 412 286 14 28 chr2 148573658 148573871 -102113983 - L1ME4a LINE L1 -376 5745 5536 21 36 0 0 chr2 148574437 148574465 -102113389 + AT_rich Low_complexity Low_complexity 1 28 0 2656 212 120 46 chr2 148574577 148575360 -102112494 - MER21B LTR ERV1 -11 852 12 31 26 0 0 chr2 148575599 148575637 -102112217 + AT_rich Low_complexity Low_complexity 1 38 0 466 192 13 0 chr2 148575712 148575790 -102112064 + MER5A DNA MER1_type 2 80 -109 715 212 0 0 chr2 148575790 148575922 -102111932 - MER45A DNA AcHobo 0 178 47 533 188 31 0 chr2 148575946 148576042 -102111812 + MER5A DNA MER1_type 78 176 -13 1958 141 43 63 chr2 148576042 148576108 -102111746 - MLT1B LTR MaLR 0 390 324 387 19 0 0 chr2 148576108 148576160 -102111694 + L1PA15 LINE L1 6113 6164 -1 1958 141 43 63 chr2 148576160 148576491 -102111363 - MLT1B LTR MaLR -66 324 1 590 254 66 85 chr2 148576513 148576874 -102110980 - L1ME LINE L1 -345 5817 5470 1830 27 9 0 chr2 148576874 148577099 -102110755 + L1PA4 LINE L1 5926 6152 -3 590 254 66 85 chr2 148577099 148577441 -102110413 - L1ME LINE L1 -692 5470 5123 529 212 137 27 chr2 148578357 148578503 -102109351 + MER5A DNA MER1_type 14 175 -14 481 253 81 69 chr2 148578911 148579135 -102108719 + MIR SINE MIR 27 256 -6 196 176 0 0 chr2 148579106 148579140 -102108714 + L2 LINE L2 3232 3265 -7 * 402 296 73 53 chr2 148579326 148579573 -102108281 + MIR SINE MIR 2 253 -9 769 134 40 0 chr2 148580727 148580876 -102106978 - Charlie5 DNA MER1_type 0 2623 2469 319 140 53 0 chr2 148580874 148580931 -102106923 - Charlie5 DNA MER1_type -2542 70 11 * 1032 153 40 75 chr2 148581520 148581748 -102106106 + AluJo SINE Alu 1 220 -92 232 171 0 0 chr2 148581749 148581784 -102106070 + Alu SINE Alu 87 121 -181 183 129 0 0 chr2 148582010 148582041 -102105813 + (TG)n Simple_repeat Simple_repeat 1 31 0 2274 96 0 0 chr2 148582611 148582902 -102104952 - AluY SINE Alu -15 296 6 3372 192 36 34 chr2 148582994 148583696 -102104158 - MER21B LTR ERV1 -113 750 48 417 192 27 0 chr2 148583697 148583770 -102104084 - MER21B LTR ERV1 -769 94 20 364 210 0 110 chr2 148583789 148583863 -102103991 - MER21B LTR ERV1 -774 89 27 2351 75 0 0 chr2 148583863 148584156 -102103698 - AluSc SINE Alu -16 293 1 364 210 0 110 chr2 148584156 148584181 -102103673 - MER21B LTR ERV1 -836 27 1 303 140 0 0 chr2 148585248 148585298 -102102556 + (CA)n Simple_repeat Simple_repeat 1 50 0 5083 65 1 1 chr2 148587174 148587833 -102100021 - L1PA8 LINE L1 0 6172 5514 21 36 0 0 chr2 148588740 148588768 -102099086 + AT_rich Low_complexity Low_complexity 1 28 0 2051 110 24 0 chr2 148588921 148589212 -102098642 + AluSx SINE Alu 1 298 -14 1798 199 14 25 chr2 148589337 148589611 -102098243 - MLT1A1 LTR MaLR -2 363 92 1988 173 61 51 chr2 148589611 148590039 -102097815 - MSTB1 LTR MaLR 0 432 1 1798 199 14 25 chr2 148590039 148590131 -102097723 - MLT1A1 LTR MaLR -273 92 1 376 295 14 22 chr2 148590477 148590616 -102097238 + L2 LINE L2 1836 1973 -1341 206 314 37 56 chr2 148591170 148591314 -102096540 - MIR SINE MIR -68 140 47 345 263 49 77 chr2 148591500 148591694 -102096160 - MIR SINE MIR -66 142 2 2197 104 7 3 chr2 148592285 148592593 -102095261 - AluSc SINE Alu 0 309 1 26 64 0 0 chr2 148593991 148594038 -102093816 + AT_rich Low_complexity Low_complexity 1 47 0 232 302 187 8 chr2 148594218 148594271 -102093583 - MIR3 SINE MIR -5 203 161 1751 122 4 8 chr2 148594271 148594518 -102093336 - AluSx SINE Alu -15 297 52 232 302 187 8 chr2 148594518 148594637 -102093217 - MIR3 SINE MIR -47 161 1 201 213 82 66 chr2 148594861 148594922 -102092932 - MIR SINE MIR -11 251 190 698 119 6 57 chr2 148594977 148595154 -102092700 + (TCCCC)n Simple_repeat Simple_repeat 4 171 0 757 110 0 65 chr2 148595167 148595416 -102092438 + (TCCCC)n Simple_repeat Simple_repeat 1 232 0 1378 143 0 50 chr2 148595423 148595661 -102092193 - AluJo SINE Alu -14 298 73 207 0 0 0 chr2 148596142 148596165 -102091689 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 186 103 0 0 chr2 148597397 148597426 -102090428 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 796 244 115 33 chr2 148597781 148598145 -102089709 - HAL1b LINE L1 -279 1069 676 21 36 0 0 chr2 148598226 148598254 -102089600 + AT_rich Low_complexity Low_complexity 1 28 0 311 44 22 0 chr2 148598580 148598625 -102089229 - MADE1 DNA Mariner 0 80 35 2064 149 0 0 chr2 148598659 148598961 -102088893 + AluSx SINE Alu 3 304 -8 611 273 101 53 chr2 148599450 148599867 -102087987 - HAL1b LINE L1 -741 607 171 2582 75 11 30 chr2 148601230 148601602 -102086252 - L1PA8 LINE L1 -2 6170 5806 4598 181 40 34 chr2 148602089 148602556 -102085298 - L1MC2 LINE L1 -2 6342 5879 2527 117 19 0 chr2 148602556 148602924 -102084930 - THE1C LTR MaLR 0 375 1 9905 121 32 25 chr2 148602924 148603674 -102084180 - THE1C-int LTR MaLR 0 1580 837 2199 110 0 0 chr2 148603674 148603976 -102083878 - AluSx SINE Alu 0 302 1 9905 121 32 25 chr2 148603976 148604793 -102083061 - THE1C-int LTR MaLR -743 837 1 2461 121 30 0 chr2 148604793 148605157 -102082697 - THE1C LTR MaLR 0 375 1 4598 181 40 34 chr2 148605157 148605700 -102082154 - L1MC2 LINE L1 -464 5880 5324 225 0 0 0 chr2 148605709 148605734 -102082120 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 1425 201 0 41 chr2 148605737 148606031 -102081823 - AluJo SINE Alu -30 282 1 686 178 0 0 chr2 148606084 148606202 -102081652 - FLAM_C SINE Alu -25 118 1 1435 202 30 58 chr2 148606202 148606823 -102081031 - L1 LINE L1 -817 5329 4753 25 0 0 0 chr2 148606824 148606849 -102081005 + AT_rich Low_complexity Low_complexity 1 25 0 28 79 0 0 chr2 148607084 148607147 -102080707 + AT_rich Low_complexity Low_complexity 1 63 0 180 0 0 0 chr2 148607343 148607363 -102080491 + (T)n Simple_repeat Simple_repeat 1 20 0 2039 132 3 25 chr2 148607672 148607991 -102079863 + AluSx SINE Alu 1 312 0 537 304 39 17 chr2 148608005 148608186 -102079668 - L1ME1 LINE L1 -55 6111 5927 492 273 32 28 chr2 148609809 148610031 -102077823 - L1ME1 LINE L1 -223 5898 5678 234 268 14 0 chr2 148610050 148610121 -102077733 - HAL1 LINE L1 -6 2501 2430 1569 171 9 60 chr2 148610124 148610440 -102077414 + AluJb SINE Alu 1 300 -12 1135 260 185 31 chr2 148610450 148611246 -102076608 - HAL1 LINE L1 -107 2400 1483 2892 9 0 0 chr2 148611507 148611823 -102076031 - AluYb8 SINE Alu -2 316 1 535 304 92 11 chr2 148612983 148613167 -102074687 - MIR SINE MIR -5 257 59 2183 124 3 0 chr2 148615129 148615435 -102072419 - AluSx SINE Alu -5 307 1 222 235 0 0 chr2 148616237 148616288 -102071566 + T-rich Low_complexity Low_complexity 1 51 0 328 159 0 34 chr2 148616394 148616482 -102071372 + GA-rich Low_complexity Low_complexity 2 86 0 373 301 172 34 chr2 148616510 148616719 -102071135 + MIR SINE MIR 20 257 -5 262 307 109 10 chr2 148616727 148616828 -102071026 - MIR SINE MIR -121 141 31 965 142 60 27 chr2 148616828 148617011 -102070843 - MER5A DNA MER1_type 0 189 1 344 260 107 95 chr2 148617024 148617193 -102070661 + MER5B DNA MER1_type 7 177 -1 258 105 0 0 chr2 148618918 148618956 -102068898 + (T)n Simple_repeat Simple_repeat 1 38 0 246 350 144 5 chr2 148619175 148619369 -102068485 - L2 LINE L2 -1312 2002 1782 1742 210 99 19 chr2 148620020 148620434 -102067420 - MLT1F LTR MaLR -92 450 4 407 273 31 57 chr2 148620914 148621108 -102066746 + L2 LINE L2 3113 3301 -12 236 250 42 28 chr2 148621942 148622014 -102065840 - Charlie4 DNA MER1_type 0 1961 1889 27 0 0 0 chr2 148622120 148622147 -102065707 + AT_rich Low_complexity Low_complexity 1 27 0 450 0 0 0 chr2 148626221 148626271 -102061583 + (CA)n Simple_repeat Simple_repeat 2 51 0 2174 108 7 0 chr2 148629141 148629438 -102058416 - AluSx SINE Alu -13 299 1 349 294 141 12 chr2 148629887 148630050 -102057804 - MLT1J LTR MaLR -22 489 306 309 281 94 0 chr2 148630484 148630580 -102057274 + L2 LINE L2 3168 3272 0 22 56 0 0 chr2 148630614 148630650 -102057204 + AT_rich Low_complexity Low_complexity 1 36 0 213 388 25 0 chr2 148631256 148631377 -102056477 - L3b LINE CR1 -203 1380 1257 317 304 0 0 chr2 148631769 148631838 -102056016 + L2 LINE L2 3200 3268 -4 336 322 106 61 chr2 148632127 148632851 -102055003 - L2 LINE L2 -8 3305 2538 729 307 86 47 chr2 148633364 148633771 -102054083 + L2 LINE L2 2891 3313 0 21 57 0 0 chr2 148634814 148634849 -102053005 + AT_rich Low_complexity Low_complexity 1 35 0 2151 96 0 10 chr2 148635291 148635592 -102052262 - AluY SINE Alu -13 298 1 2447 67 0 0 chr2 148635758 148636056 -102051798 + AluY SINE Alu 1 298 -13 300 260 26 0 chr2 148636814 148636891 -102050963 - L1ME LINE L1 -451 5670 5592 1987 130 3 7 chr2 148638283 148638576 -102049278 - AluJb SINE Alu -18 294 3 2272 104 0 7 chr2 148638686 148638995 -102048859 + AluSq SINE Alu 1 307 -6 198 0 0 0 chr2 148639179 148639201 -102048653 + (T)n Simple_repeat Simple_repeat 1 22 0 420 274 103 17 chr2 148640036 148640153 -102047701 - L2 LINE L2 -1 3271 3145 37 39 0 0 chr2 148640666 148640717 -102047137 + AT_rich Low_complexity Low_complexity 1 51 0 185 239 109 0 chr2 148640811 148640857 -102046997 + MIR SINE MIR 36 86 -122 213 340 98 38 chr2 148642076 148642341 -102045513 - L2 LINE L2 -438 2876 2596 192 309 0 0 chr2 148642677 148642719 -102045135 + L2 LINE L2 3223 3264 -8 333 118 0 0 chr2 148642792 148642843 -102045011 + (TG)n Simple_repeat Simple_repeat 2 52 0 1634 195 7 30 chr2 148642854 148643156 -102044698 - AluJo SINE Alu -17 295 1 574 195 32 7 chr2 148644079 148644232 -102043622 - L1ME LINE L1 -1011 5135 4977 24 0 0 0 chr2 148645650 148645674 -102042180 + AT_rich Low_complexity Low_complexity 1 24 0 1967 134 3 0 chr2 148646352 148646666 -102041188 - AluSq SINE Alu 0 315 1 605 276 49 16 chr2 148648524 148648709 -102039145 - MIR SINE MIR -52 210 20 208 277 0 0 chr2 148649554 148649601 -102038253 - MIR3 SINE MIR 0 208 162 23 0 0 0 chr2 148649974 148649997 -102037857 + AT_rich Low_complexity Low_complexity 1 23 0 817 143 60 0 chr2 148650833 148650966 -102036888 + FRAM SINE Alu 1 141 -35 258 32 0 0 chr2 148650972 148651003 -102036851 + (TAA)n Simple_repeat Simple_repeat 1 31 0 317 282 242 7 chr2 148653219 148653368 -102034486 + MLT1L LTR MaLR 1 184 -431 7389 35 7 0 chr2 148653691 148654981 -102032873 - L1PA4 LINE L1 0 6155 4861 28 79 0 0 chr2 148655045 148655108 -102032746 + AT_rich Low_complexity Low_complexity 1 63 0 369 0 0 0 chr2 148655655 148655696 -102032158 + (CA)n Simple_repeat Simple_repeat 1 41 0 23 0 0 0 chr2 148655992 148656015 -102031839 + AT_rich Low_complexity Low_complexity 1 23 0 209 231 39 77 chr2 148657142 148657220 -102030634 - L2 LINE L2 -19 3253 3179 209 217 0 22 chr2 148657230 148657276 -102030578 + L2 LINE L2 3227 3271 -1 868 321 82 22 chr2 148657327 148657878 -102029976 + L2 LINE L2 2728 3313 0 1052 88 116 44 chr2 148658241 148658422 -102029432 - MER30 DNA MER1_type -36 194 1 258 254 0 0 chr2 148658691 148658754 -102029100 + Charlie8 DNA MER1_type 2355 2417 0 23 33 0 0 chr2 148658794 148658824 -102029030 + AT_rich Low_complexity Low_complexity 1 30 0 309 265 59 0 chr2 148658889 148658957 -102028897 + MIR SINE MIR 35 106 -102 21 57 0 0 chr2 148659179 148659214 -102028640 + AT_rich Low_complexity Low_complexity 1 35 0 2236 107 0 3 chr2 148659498 148659797 -102028057 + AluSq SINE Alu 1 298 -15 880 326 102 5 chr2 148660132 148660573 -102027281 - MLT1K LTR MaLR -8 580 97 1393 211 42 10 chr2 148660613 148660902 -102026952 - AluJo SINE Alu -4 298 1 305 237 0 10 chr2 148661477 148661557 -102026297 + (CATATA)n Simple_repeat Simple_repeat 3 83 -15 1777 161 60 24 chr2 148661557 148661893 -102025961 + MER7A DNA MER2_type 1 346 0 305 237 0 10 chr2 148661893 148661909 -102025945 + (CATATA)n Simple_repeat Simple_repeat 83 98 0 300 70 0 0 chr2 148662600 148662643 -102025211 + (TG)n Simple_repeat Simple_repeat 1 43 0 254 236 95 68 chr2 148664436 148664620 -102023234 + MIR3 SINE MIR 5 198 -11 25 0 0 0 chr2 148664722 148664747 -102023107 + AT_rich Low_complexity Low_complexity 1 25 0 1540 202 0 21 chr2 148665021 148665308 -102022546 + AluJo SINE Alu 2 282 -30 249 33 0 0 chr2 148665311 148665341 -102022513 + (CA)n Simple_repeat Simple_repeat 2 31 0 301 102 102 0 chr2 148665344 148665452 -102022402 + (TA)n Simple_repeat Simple_repeat 2 120 0 2002 152 7 0 chr2 148666440 148666737 -102021117 + AluSx SINE Alu 1 299 -13 359 204 237 0 chr2 148667154 148667247 -102020607 + L2 LINE L2 3158 3272 0 508 234 83 55 chr2 148668571 148668861 -102018993 - L1MC5 LINE L1 -51 7910 7613 2169 110 0 16 chr2 148668925 148669242 -102018612 + AluSx SINE Alu 1 312 0 654 191 9 0 chr2 148669564 148669679 -102018175 + FLAM_A SINE Alu 4 119 -14 218 158 0 0 chr2 148669711 148669749 -102018105 - MER5B DNA MER1_type -134 44 7 554 51 13 0 chr2 148670259 148670337 -102017517 + (TCCA)n Simple_repeat Simple_repeat 2 80 0 1311 220 140 10 chr2 148670676 148671089 -102016765 - MLT1C LTR MaLR 0 467 1 2045 184 77 7 chr2 148671281 148671695 -102016159 + MSTB2 LTR MaLR 15 457 0 276 321 18 9 chr2 148671890 148672002 -102015852 - MIR3 SINE MIR -35 173 61 638 282 15 55 chr2 148673543 148673745 -102014109 + MIR SINE MIR 60 253 -9 27 0 0 0 chr2 148674686 148674713 -102013141 + AT_rich Low_complexity Low_complexity 1 27 0 312 37 56 0 chr2 148675928 148675982 -102011872 + (TA)n Simple_repeat Simple_repeat 1 57 0 430 289 133 40 chr2 148676201 148676623 -102011231 - L1M2 LINE L1 -5526 1323 740 201 26 51 26 chr2 148676880 148676919 -102010935 + (TA)n Simple_repeat Simple_repeat 1 40 0 2194 116 0 10 chr2 148677040 148677343 -102010511 - AluSx SINE Alu -9 303 4 1771 168 10 3 chr2 148677883 148678174 -102009680 - AluJb SINE Alu -19 293 1 296 286 26 0 chr2 148681600 148681677 -102006177 - L2 LINE L2 -36 3236 3158 480 138 254 91 chr2 148681708 148681940 -102005914 + MER33 DNA MER1_type 33 302 -22 239 261 81 59 chr2 148682397 148682507 -102005347 - L1M4 LINE L1 -1501 4645 4539 2281 123 126 5 chr2 148682507 148682888 -102004966 + MSTA LTR MaLR 2 428 0 239 261 81 59 chr2 148682888 148682999 -102004855 - L1M4 LINE L1 -1607 4539 4419 592 295 81 46 chr2 148683131 148683613 -102004241 - L1M4 LINE L1 -1926 4220 3722 1865 128 4 7 chr2 148683740 148684013 -102003841 + AluSx SINE Alu 1 272 -40 189 0 0 0 chr2 148684013 148684034 -102003820 + (TC)n Simple_repeat Simple_repeat 2 22 0 180 186 0 0 chr2 148684038 148684097 -102003757 + (TA)n Simple_repeat Simple_repeat 1 59 0 2433 128 3 11 chr2 148684794 148685161 -102002693 - THE1B LTR MaLR 0 364 1 1217 275 76 17 chr2 148685182 148685589 -102002265 + L1MEc LINE L1 245 675 -5932 1824 199 34 27 chr2 148685612 148686025 -102001829 - MSTB1 LTR MaLR -16 416 1 313 203 13 13 chr2 148686025 148686104 -102001750 + L1MEc LINE L1 705 783 -5824 1282 259 119 18 chr2 148686106 148686500 -102001354 - MLT1E LTR MaLR -159 434 1 365 272 42 45 chr2 148686500 148686744 -102001110 + L1MEc LINE L1 1490 1854 -4725 1907 160 7 10 chr2 148687060 148687366 -102000488 - AluSx SINE Alu -7 305 1 31 82 0 0 chr2 148687444 148687517 -102000337 + AT_rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr2 148687651 148687679 -102000175 + AT_rich Low_complexity Low_complexity 1 28 0 556 342 28 31 chr2 148688496 148688754 -101999100 - MIR SINE MIR 0 262 2 2212 224 21 21 chr2 148688945 148689464 -101998390 + LTR40a LTR ERVL 1 519 0 641 254 111 22 chr2 148689504 148689863 -101997991 + L1ME4a LINE L1 5728 6118 -3 323 217 135 68 chr2 148690206 148690413 -101997441 + L1MC5 LINE L1 7720 7940 -21 624 204 143 0 chr2 148690443 148690590 -101997264 - MER5B DNA MER1_type -7 171 4 22 0 0 0 chr2 148690735 148690757 -101997097 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 148690909 148690937 -101996917 + AT_rich Low_complexity Low_complexity 1 28 0 507 230 113 29 chr2 148691062 148691266 -101996588 - L1MC5 LINE L1 -22 7939 7719 2053 135 19 29 chr2 148691901 148692280 -101995574 - THE1C LTR MaLR 0 375 1 189 171 0 0 chr2 148693136 148693171 -101994683 + (TATATG)n Simple_repeat Simple_repeat 4 38 0 698 346 94 21 chr2 148693665 148694177 -101993677 - L2 LINE L2 -573 2741 2193 2039 114 0 7 chr2 148694291 148694615 -101993239 - AluSc SINE Alu 0 322 1 326 204 75 183 chr2 148695336 148695481 -101992373 - MIR SINE MIR -24 238 126 1998 114 7 4 chr2 148695481 148695786 -101992068 + AluSx SINE Alu 1 306 0 326 204 75 183 chr2 148695786 148695879 -101991975 - MIR SINE MIR -136 126 25 181 197 84 84 chr2 148695973 148696044 -101991810 - L2 LINE L2 -565 2749 2679 38 51 0 0 chr2 148696385 148696444 -101991410 + AT_rich Low_complexity Low_complexity 1 59 0 281 264 71 11 chr2 148699196 148699288 -101988566 + MIR SINE MIR 54 141 -67 209 161 12 37 chr2 148701868 148701949 -101985905 + (TA)n Simple_repeat Simple_repeat 2 80 0 208 280 140 9 chr2 148702714 148702821 -101985033 + MIR3 SINE MIR 56 176 -32 212 179 0 0 chr2 148703839 148703878 -101983976 + (TTA)n Simple_repeat Simple_repeat 3 41 0 237 327 97 9 chr2 148704766 148704879 -101982975 - L2 LINE L2 0 3272 3150 449 302 41 17 chr2 148705666 148705838 -101982016 + MIR SINE MIR 2 177 -85 2143 78 65 3 chr2 148705984 148706277 -101981577 - AluY SINE Alu 0 311 1 183 306 0 41 chr2 148707204 148707253 -101980601 - L2 LINE L2 -15 3257 3211 353 316 186 16 chr2 148708082 148708275 -101979579 + L2 LINE L2 2469 2694 -620 259 343 0 0 chr2 148708758 148708831 -101979023 + L2 LINE L2 3185 3257 -15 321 284 63 0 chr2 148708835 148708962 -101978892 + L1ME4a LINE L1 5987 6121 0 1030 137 58 32 chr2 148709142 148709332 -101978522 - MER3 DNA MER1_type 0 209 15 1554 233 87 55 chr2 148711323 148711993 -101975861 - L1MC4 LINE L1 -54 7988 7298 205 322 22 0 chr2 148712795 148712879 -101974975 + MIR SINE MIR 40 127 -81 282 244 64 13 chr2 148713136 148713214 -101974640 + L2 LINE L2 3185 3266 -6 306 0 0 0 chr2 148714677 148714711 -101973143 + (T)n Simple_repeat Simple_repeat 1 34 0 180 0 0 0 chr2 148715566 148715586 -101972268 + (T)n Simple_repeat Simple_repeat 1 20 0 24 53 0 0 chr2 148716109 148716147 -101971707 + AT_rich Low_complexity Low_complexity 1 38 0 2393 171 7 12 chr2 148717438 148717854 -101970000 - MER47B DNA MER2_type 0 418 5 201 39 0 0 chr2 148719020 148719046 -101968808 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 210 118 0 0 chr2 148719072 148719106 -101968748 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 31 44 0 0 chr2 148719249 148719294 -101968560 + AT_rich Low_complexity Low_complexity 1 45 0 273 336 103 14 chr2 148719842 148719988 -101967866 - MIR3 SINE MIR -43 165 7 394 338 105 5 chr2 148721125 148721335 -101966519 + MIR SINE MIR 29 259 -3 2741 266 147 37 chr2 148721508 148722616 -101965238 + L2 LINE L2 895 2124 -1190 225 292 115 49 chr2 148722613 148722839 -101965015 - L2 LINE L2 -1177 2137 1897 * 204 40 0 0 chr2 148722957 148722982 -101964872 + (TC)n Simple_repeat Simple_repeat 1 25 0 377 363 8 0 chr2 148722984 148723108 -101964746 - MIR SINE MIR -60 148 24 593 117 0 47 chr2 148724182 148724310 -101963544 + (TTTCC)n Simple_repeat Simple_repeat 3 124 0 1559 195 13 7 chr2 148724313 148724336 -101963518 - AluJb SINE Alu -2 310 289 237 33 0 0 chr2 148724336 148724366 -101963488 + (TCCCC)n Simple_repeat Simple_repeat 4 33 0 1559 195 13 7 chr2 148724366 148724650 -101963204 - AluJb SINE Alu -23 289 1 359 260 134 89 chr2 148724698 148724944 -101962910 - MIR SINE MIR -1 261 5 276 293 72 44 chr2 148726947 148727128 -101960726 - L3b LINE CR1 -158 1425 1240 1013 68 51 9 chr2 148727130 148727569 -101960285 + (TA)n Simple_repeat Simple_repeat 1 457 0 384 283 0 19 chr2 148727624 148727730 -101960124 + MIR SINE MIR 41 144 -64 407 261 155 12 chr2 148728736 148728897 -101958957 - MIR SINE MIR -1 261 78 21 36 0 0 chr2 148729605 148729633 -101958221 + AT_rich Low_complexity Low_complexity 1 28 0 316 312 34 38 chr2 148729833 148730096 -101957758 + MIR SINE MIR 1 262 0 248 283 60 121 chr2 148731912 148732078 -101955776 - MIR3 SINE MIR -5 203 48 26 50 0 0 chr2 148732548 148732588 -101955266 + AT_rich Low_complexity Low_complexity 1 40 0 326 292 80 18 chr2 148732814 148732927 -101954927 + MIR3 SINE MIR 9 128 -80 1079 202 14 5 chr2 148733941 148734149 -101953705 + MER6B DNA MER2_type 1 210 0 368 209 73 141 chr2 148734257 148734448 -101953406 + MER5B DNA MER1_type 1 178 0 228 202 202 32 chr2 148735531 148735625 -101952229 + MER117 DNA MER1_type 57 166 -31 352 374 112 5 chr2 148736243 148736449 -101951405 - MIR SINE MIR -30 232 5 231 209 0 0 chr2 148737704 148737747 -101950107 + (TG)n Simple_repeat Simple_repeat 1 43 0 533 312 14 0 chr2 148737795 148737933 -101949921 + MER5B DNA MER1_type 5 144 -34 2309 138 31 69 chr2 148739149 148739626 -101948228 + LTR32 LTR ERVL 13 471 0 193 0 94 0 chr2 148739854 148739886 -101947968 + T-rich Low_complexity Low_complexity 2 36 0 216 0 0 0 chr2 148740807 148740831 -101947023 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 342 365 40 7 chr2 148740934 148741082 -101946772 - MIR SINE MIR -49 213 61 2201 72 14 0 chr2 148741784 148742085 -101945769 - AluY SINE Alu 0 305 1 2215 83 0 4 chr2 148742547 148742857 -101944997 + AluY SINE Alu 7 315 0 196 222 0 95 chr2 148743865 148743928 -101943926 + MIR SINE MIR 119 175 -87 237 65 0 0 chr2 148744323 148744354 -101943500 + (CA)n Simple_repeat Simple_repeat 1 31 0 1968 140 0 7 chr2 148745419 148745741 -101942113 - AluSx SINE Alu 0 320 1 351 0 0 0 chr2 148745963 148746002 -101941852 + (TTTTG)n Simple_repeat Simple_repeat 5 43 0 2816 239 58 40 chr2 148746919 148748431 -101939423 - L1MDa LINE L1 -4728 1812 44 190 0 32 32 chr2 148750113 148750144 -101937710 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5861 39 5 4 chr2 148750145 148750898 -101936956 - L1PA5 LINE L1 -11 6143 5390 939 195 98 5 chr2 148751249 148751454 -101936400 + MER58A DNA MER1_type 1 224 0 498 310 6 29 chr2 148751484 148751658 -101936196 + MER5A DNA MER1_type 9 178 -11 24 0 0 0 chr2 148752042 148752066 -101935788 + AT_rich Low_complexity Low_complexity 1 24 0 204 369 19 4 chr2 148752116 148752234 -101935620 - MIR SINE MIR 0 208 88 1743 204 70 0 chr2 148752334 148752760 -101935094 - L1MC4 LINE L1 -1114 6928 6473 577 197 8 8 chr2 148752762 148752879 -101934975 + Tigger1 DNA MER2_type 1 117 -2301 273 171 66 40 chr2 148753304 148753380 -101934474 + MER116 DNA Mariner 3 80 0 195 250 0 0 chr2 148754061 148754101 -101933753 + MER5B DNA MER1_type 10 49 -129 194 328 147 0 chr2 148755007 148755123 -101932731 - MIR SINE MIR -11 251 119 268 238 50 0 chr2 148755340 148755420 -101932434 + MLT1J LTR MaLR 428 511 0 1499 116 21 131 chr2 148756372 148756701 -101931153 + AluJb SINE Alu 2 294 -8 635 159 32 16 chr2 148757003 148757129 -101930725 + AluSg/x SINE Alu 169 296 -16 3515 115 10 10 chr2 148757129 148757705 -101930149 + Tigger1 DNA MER2_type 1499 2074 -344 348 261 0 22 chr2 148757715 148757807 -101930047 - L1MC4 LINE L1 -1339 6703 6614 2194 90 14 0 chr2 148757822 148758111 -101929743 - AluSq SINE Alu -20 293 1 2387 81 0 7 chr2 148758453 148758748 -101929106 - AluY SINE Alu -18 293 1 306 295 93 14 chr2 148758923 148759062 -101928792 - MER5A DNA MER1_type -33 156 7 481 215 31 31 chr2 148759204 148759334 -101928520 - L1ME LINE L1 -454 5712 5583 248 211 28 42 chr2 148759378 148759449 -101928405 - L2 LINE L2 0 3313 3244 1222 204 123 60 chr2 148759868 148760333 -101927521 - MLT1D LTR MaLR 0 505 12 336 355 8 32 chr2 148760380 148760504 -101927350 - L2 LINE L2 -1 3271 3151 259 23 45 23 chr2 148761091 148761135 -101926719 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 6231 79 18 34 chr2 148761135 148762081 -101925773 - SVA Other Other -23 1363 433 1081 30 6 12 chr2 148762098 148762267 -101925587 - SVA Other Other -520 866 699 746 264 88 48 chr2 148762291 148763038 -101924816 - L1MEd LINE L1 -4863 1256 574 379 278 77 24 chr2 148763317 148763486 -101924368 + MER5B DNA MER1_type 1 178 0 382 252 192 53 chr2 148763551 148763702 -101924152 - MER5B DNA MER1_type 0 178 7 342 239 68 0 chr2 148763717 148763805 -101924049 - MER102b DNA MER1_type 0 341 248 246 233 0 0 chr2 148763944 148764004 -101923850 + (TATG)n Simple_repeat Simple_repeat 4 63 0 202 179 36 0 chr2 148764376 148764432 -101923422 + (TTATA)n Simple_repeat Simple_repeat 5 62 0 693 266 25 55 chr2 148764899 148765136 -101922718 + MIR SINE MIR 12 241 -21 240 254 0 30 chr2 148766126 148766193 -101921661 - L2 LINE L2 -181 3091 3027 234 275 55 73 chr2 148767204 148767313 -101920541 + L2 LINE L2 3182 3288 -25 21 36 0 0 chr2 148767776 148767804 -101920050 + AT_rich Low_complexity Low_complexity 1 28 0 2044 190 115 117 chr2 148768315 148769143 -101918711 - LTR1B LTR ERV1 0 826 1 2568 46 0 3 chr2 148769878 148770182 -101917672 + AluY SINE Alu 1 303 -8 556 314 65 15 chr2 148770340 148770553 -101917301 - MIR SINE MIR 0 262 38 883 215 42 5 chr2 148770773 148770964 -101916890 - AluSg/x SINE Alu -6 306 109 37540 64 5 1 chr2 148771069 148771924 -101915930 - L1P LINE L1 -1036 5110 4260 2249 99 3 7 chr2 148771924 148772227 -101915627 - AluY SINE Alu -9 302 1 37540 64 5 1 chr2 148772227 148776452 -101911402 - L1P LINE L1 -1886 4260 11 2055 143 0 0 chr2 148776476 148776776 -101911078 - AluSx SINE Alu -12 300 1 297 51 0 0 chr2 148776913 148776952 -101910902 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 219 204 0 0 chr2 148777162 148777211 -101910643 + L2 LINE L2 3265 3313 0 200 200 0 0 chr2 148777470 148777505 -101910349 + (CAT)n Simple_repeat Simple_repeat 3 37 0 326 293 47 0 chr2 148778055 148778161 -101909693 + MIR SINE MIR 63 173 -89 188 264 14 56 chr2 148778246 148778318 -101909536 + L3 LINE CR1 421 489 -1088 322 294 109 88 chr2 148778400 148778638 -101909216 + MIR SINE MIR 6 248 -14 198 308 44 33 chr2 148778758 148778849 -101909005 + L3 LINE CR1 745 836 -741 31 44 0 0 chr2 148778856 148778901 -101908953 + AT_rich Low_complexity Low_complexity 1 45 0 208 293 45 113 chr2 148778927 148779149 -101908705 + L3 LINE CR1 1188 1394 -183 189 0 0 0 chr2 148779168 148779189 -101908665 + (TG)n Simple_repeat Simple_repeat 1 21 0 2490 65 3 0 chr2 148779416 148779724 -101908130 + AluY SINE Alu 1 309 -2 199 314 71 0 chr2 148779789 148779859 -101907995 + L3 LINE CR1 1497 1571 -6 2249 101 3 3 chr2 148781855 148782151 -101905703 - AluSx SINE Alu -16 296 1 304 307 153 35 chr2 148784916 148785118 -101902736 + MIR SINE MIR 37 262 0 192 342 13 38 chr2 148785233 148785312 -101902542 - L2 LINE L2 -8 3305 3229 1802 146 61 30 chr2 148785828 148786191 -101901663 + THE1C LTR MaLR 1 374 -1 210 322 44 11 chr2 148786701 148786791 -101901063 - L2 LINE L2 0 3272 3180 360 0 0 0 chr2 148787673 148787713 -101900141 + (CA)n Simple_repeat Simple_repeat 2 41 0 2358 208 33 60 chr2 148788057 148788109 -101899745 - L1ME1 LINE L1 -5 6161 6109 2465 81 0 0 chr2 148788109 148788406 -101899448 + AluY SINE Alu 1 297 -14 2358 208 33 60 chr2 148788406 148789087 -101898767 - L1ME1 LINE L1 -57 6109 5448 * 3391 228 43 73 chr2 148789074 148790574 -101897280 - L1ME1 LINE L1 -900 5246 3791 7847 184 43 19 chr2 148790577 148793546 -101894308 - L1MA4A LINE L1 -1 6155 3192 271 255 163 10 chr2 148794035 148794133 -101893721 + MIR SINE MIR 94 206 -56 648 172 82 0 chr2 148794145 148794267 -101893587 + AluJo SINE Alu 5 136 -176 1435 223 3 20 chr2 148795229 148795525 -101892329 + AluJo SINE Alu 1 291 -21 309 100 0 0 chr2 148795897 148795947 -101891907 + (CA)n Simple_repeat Simple_repeat 2 51 0 971 319 65 20 chr2 148796458 148796963 -101890891 + HERV16 LTR ERVL 2029 2556 -2440 2090 91 0 0 chr2 148797164 148797462 -101890392 + L1PB2 LINE L1 5589 5886 -265 2155 138 33 30 chr2 148798012 148798375 -101889479 - THE1B LTR MaLR 0 364 1 638 322 38 8 chr2 148798906 148799170 -101888684 - L2 LINE L2 -970 2344 2073 399 290 28 0 chr2 148799197 148799304 -101888550 + L2 LINE L2 3199 3308 -5 341 308 70 14 chr2 148799616 148799759 -101888095 - L1ME3 LINE L1 -14 6148 5998 1274 106 29 33 chr2 148799937 148800182 -101887672 - L1P4 LINE L1 -642 5526 5283 573 282 44 26 chr2 148800574 148800801 -101887053 + HERV16 LTR ERVL 1743 1973 -3023 1465 138 84 3 chr2 148801362 148801658 -101886196 + L1MA4A LINE L1 5828 6147 -156 1499 142 11 0 chr2 148801658 148801932 -101885922 + L1MA4A LINE L1 6018 6302 -1 260 259 0 65 chr2 148803567 148803706 -101884148 + GA-rich Low_complexity Low_complexity 4 133 0 2431 100 0 0 chr2 148806620 148806930 -101880924 + AluSg SINE Alu 1 310 0 1864 154 3 22 chr2 148807073 148807385 -101880469 + AluSq SINE Alu 1 306 -7 335 336 80 0 chr2 148807536 148807673 -101880181 + MIR3 SINE MIR 13 160 -48 28 48 0 0 chr2 148807820 148807862 -101879992 + GC_rich Low_complexity Low_complexity 1 42 0 249 343 10 0 chr2 148808116 148808218 -101879636 - L3 LINE CR1 -573 1004 902 394 203 55 110 chr2 148810507 148810670 -101877184 - L2 LINE L2 -1 3312 3159 2287 80 27 3 chr2 148810812 148811111 -101876743 + AluSq SINE Alu 1 306 -7 1184 185 27 17 chr2 148811633 148811925 -101875929 - AluY SINE Alu -2 309 15 258 105 0 0 chr2 148813529 148813567 -101874287 + (TG)n Simple_repeat Simple_repeat 2 39 0 200 303 0 73 chr2 148815273 148815382 -101872472 - MIR SINE MIR -46 216 116 212 222 0 16 chr2 148816176 148816239 -101871615 + (TA)n Simple_repeat Simple_repeat 1 62 0 21 0 0 0 chr2 148818857 148818878 -101868976 + AT_rich Low_complexity Low_complexity 1 21 0 1672 122 24 4 chr2 148819992 148820246 -101867608 - AluSg SINE Alu -51 259 1 409 53 18 0 chr2 148820246 148820303 -101867551 - AluSc SINE Alu -175 134 77 1348 151 0 9 chr2 148820304 148820516 -101867338 - AluSg SINE Alu -100 210 1 225 0 0 0 chr2 148821164 148821189 -101866665 + (T)n Simple_repeat Simple_repeat 1 25 0 299 272 25 0 chr2 148822664 148822745 -101865109 + MIR SINE MIR 64 146 -116 415 206 0 0 chr2 148822923 148822996 -101864858 - MER5A DNA MER1_type -116 73 1 1820 160 0 3 chr2 148823109 148823391 -101864463 + AluJo SINE Alu 1 281 -31 329 208 129 10 chr2 148823739 148823840 -101864014 - L2 LINE L2 -1904 1410 1298 540 297 227 17 chr2 148824071 148824552 -101863302 + L2 LINE L2 318 899 -2415 1968 206 93 16 chr2 148824654 148825233 -101862621 + LTR48B LTR ERV1 21 644 0 351 245 151 19 chr2 148825377 148825483 -101862371 - L2 LINE L2 0 3313 3194 2177 83 4 0 chr2 148825585 148825861 -101861993 - AluY SINE Alu -17 294 18 291 71 0 0 chr2 148826151 148826193 -101861661 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 1262 304 105 61 chr2 148826359 148827522 -101860332 + L2 LINE L2 2004 3226 -87 655 292 81 8 chr2 148828163 148828399 -101859455 + MIR SINE MIR 5 257 -5 191 179 36 54 chr2 148829200 148829256 -101858598 - MIR SINE MIR -78 130 76 803 210 20 60 chr2 148829414 148829662 -101858192 + MER102b DNA MER1_type 104 341 0 181 385 89 17 chr2 148830646 148830825 -101857029 + L2 LINE L2 2880 3071 -201 375 305 42 8 chr2 148831039 148831157 -101856697 + L2 LINE L2 3140 3261 -11 242 324 157 0 chr2 148833857 148833959 -101853895 + L2 LINE L2 3155 3272 0 3178 166 52 5 chr2 148834803 148835377 -101852477 - Tigger7 DNA MER2_type -1886 601 1 451 265 139 0 chr2 148835579 148835745 -101852109 - MIR SINE MIR -37 225 37 342 0 0 0 chr2 148836381 148836419 -101851435 + (CA)n Simple_repeat Simple_repeat 1 38 0 39 0 0 0 chr2 148837460 148837499 -101850355 + AT_rich Low_complexity Low_complexity 1 39 0 607 199 30 0 chr2 148837693 148837939 -101849915 + (TA)n Simple_repeat Simple_repeat 1 253 0 430 217 11 0 chr2 148838732 148838824 -101849030 - MER103 DNA DNA -19 147 55 617 268 64 27 chr2 148841360 148841580 -101846274 - L2 LINE L2 0 3313 3086 438 281 7 22 chr2 148841593 148841732 -101846122 - MER5B DNA MER1_type -35 143 7 380 244 196 18 chr2 148841701 148841930 -101845924 - L2 LINE L2 -205 3108 2839 * 862 218 10 21 chr2 148842343 148842536 -101845318 + MER20 DNA MER1_type 29 219 0 831 222 16 22 chr2 148842574 148842759 -101845095 - MER5A DNA MER1_type -2 187 4 618 254 30 73 chr2 148843234 148843537 -101844317 - L1MC4a LINE L1 -153 5968 5679 195 129 0 0 chr2 148843976 148844007 -101843847 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1959 150 0 3 chr2 148844008 148844301 -101843553 - AluSx SINE Alu -20 292 1 312 305 19 19 chr2 148844426 148844531 -101843323 - MIR SINE MIR -67 141 37 1994 127 35 0 chr2 148845552 148845835 -101842019 - AluSx SINE Alu -19 293 1 253 321 149 23 chr2 148845858 148846079 -101841775 + L3 LINE CR1 1096 1344 -233 368 219 89 32 chr2 148846126 148846249 -101841605 - L1ME4a LINE L1 -16 6105 5976 226 227 373 0 chr2 148846315 148846390 -101841464 + L3 LINE CR1 1426 1528 -49 510 261 8 37 chr2 148847184 148847318 -101840536 + L2 LINE L2 3175 3304 -9 741 316 80 34 chr2 148848215 148848381 -101839473 + LTR16A LTR ERVL 14 171 -279 1743 158 3 27 chr2 148848381 148848673 -101839181 - AluJo SINE Alu -27 285 1 741 316 80 34 chr2 148848673 148848917 -101838937 + LTR16A LTR ERVL 171 443 -7 853 274 48 35 chr2 148848925 148849235 -101838619 + HERV16 LTR ERVL 2 315 -4681 749 330 35 0 chr2 148849251 148849509 -101838345 + HERV16 LTR ERVL 1313 1579 -3417 810 274 68 15 chr2 148850099 148850435 -101837419 + LTR16A LTR ERVL 16 369 -81 446 322 40 17 chr2 148850703 148850877 -101836977 - MER5B DNA MER1_type 0 178 1 376 315 45 19 chr2 148850885 148851057 -101836797 + MIR SINE MIR 33 212 -36 1969 145 0 3 chr2 148851074 148851371 -101836483 - AluSq SINE Alu -17 296 1 354 287 0 10 chr2 148851501 148851602 -101836252 - MER5B DNA MER1_type -77 101 2 187 227 15 76 chr2 148851603 148851669 -101836185 - MIR SINE MIR -153 109 48 470 288 131 0 chr2 148853509 148853669 -101834185 + MIR SINE MIR 20 200 -62 312 272 148 6 chr2 148855599 148855768 -101832086 - MER117 DNA MER1_type -3 194 2 25 51 0 0 chr2 148855963 148856002 -101831852 + AT_rich Low_complexity Low_complexity 1 39 0 373 356 6 25 chr2 148856163 148856323 -101831531 - MIR3 SINE MIR -32 176 20 2921 160 36 29 chr2 148857384 148857430 -101830424 - L1MC2 LINE L1 -11 6333 6289 1432 63 5 39 chr2 148857430 148857635 -101830219 + L1PA8 LINE L1 5971 6168 -4 2921 160 36 29 chr2 148857635 148858175 -101829679 - L1MC2 LINE L1 -55 6289 5743 243 88 0 0 chr2 148861221 148861255 -101826599 + (A)n Simple_repeat Simple_repeat 1 34 0 185 243 0 0 chr2 148861443 148861480 -101826374 - MIR3 SINE MIR -53 155 119 545 306 105 10 chr2 148863592 148863801 -101824053 + L2 LINE L2 2748 2976 -338 528 265 83 17 chr2 148863878 148864059 -101823795 + MIR SINE MIR 43 235 -27 1304 134 126 16 chr2 148864751 148864997 -101822857 + MSTA LTR MaLR 138 410 -18 719 271 71 25 chr2 148865639 148865879 -101821975 + MIR SINE MIR 8 258 -4 949 211 33 14 chr2 148866087 148866300 -101821554 + MER20 DNA MER1_type 2 218 -1 835 190 6 0 chr2 148866866 148867024 -101820830 + MLT1A2 LTR MaLR 216 374 0 222 338 50 38 chr2 148867041 148867201 -101820653 + L3 LINE CR1 1122 1283 -294 24 67 0 0 chr2 148867950 148867995 -101819859 + AT_rich Low_complexity Low_complexity 1 45 0 749 183 0 0 chr2 148868474 148868600 -101819254 + FLAM_C SINE Alu 1 126 -17 253 341 8 23 chr2 148868808 148868937 -101818917 + L3b LINE CR1 1267 1393 -190 302 266 116 64 chr2 148869189 148869362 -101818492 - HAL1 LINE L1 -61 2446 2265 23 0 0 0 chr2 148869539 148869562 -101818292 + AT_rich Low_complexity Low_complexity 1 23 0 3186 195 81 45 chr2 148869578 148870602 -101817252 - L1ME1 LINE L1 -4 6162 5109 336 263 0 26 chr2 148870597 148870711 -101817143 - L1MEc LINE L1 -5259 1137 1027 * 515 113 31 21 chr2 148870768 148870865 -101816989 - L1MA6 LINE L1 0 6300 6203 235 265 15 0 chr2 148871066 148871134 -101816720 + (TA)n Simple_repeat Simple_repeat 2 70 0 1222 90 24 76 chr2 148873449 148873660 -101814194 - L1PA11 LINE L1 -5 6169 5970 2487 145 26 0 chr2 148873660 148874080 -101813774 + L1P LINE L1 4890 5320 -826 180 0 0 0 chr2 148874951 148874971 -101812883 + (T)n Simple_repeat Simple_repeat 1 20 0 1745 178 5 78 chr2 148877820 148878241 -101809613 - MLT1B LTR MaLR 0 390 1 23 0 0 0 chr2 148878682 148878705 -101809149 + AT_rich Low_complexity Low_complexity 1 23 0 310 258 0 0 chr2 148879351 148879417 -101808437 + L2 LINE L2 3231 3296 -17 267 31 0 0 chr2 148879993 148880025 -101807829 + (TG)n Simple_repeat Simple_repeat 1 32 0 373 259 184 35 chr2 148880128 148880305 -101807549 + MIR3 SINE MIR 8 206 -56 206 121 0 0 chr2 148882354 148882387 -101805467 + (A)n Simple_repeat Simple_repeat 1 33 0 669 284 94 50 chr2 148883072 148883245 -101804609 + MLT1J2 LTR MaLR 50 214 -236 369 0 0 0 chr2 148883245 148883286 -101804568 + (CA)n Simple_repeat Simple_repeat 1 41 0 669 284 94 50 chr2 148883286 148883493 -101804361 + MLT1J2 LTR MaLR 214 447 -3 492 280 19 25 chr2 148883907 148884064 -101803790 - L2 LINE L2 0 3313 3158 307 240 165 50 chr2 148885558 148885679 -101802175 - L3b LINE CR1 -12 1571 1437 216 254 42 28 chr2 148887190 148887261 -101800593 + MIR3 SINE MIR 4 75 -133 297 210 116 80 chr2 148887997 148888135 -101799719 - MER103 DNA DNA 0 166 24 380 152 10 61 chr2 148888838 148888937 -101798917 + MER103 DNA DNA 24 117 -49 268 237 34 79 chr2 148889203 148889292 -101798562 - MIR SINE MIR -62 146 70 258 295 133 40 chr2 148890610 148890817 -101797037 + L2 LINE L2 2782 3006 -307 297 0 0 0 chr2 148891182 148891215 -101796639 + (CA)n Simple_repeat Simple_repeat 2 34 0 255 182 0 0 chr2 148891280 148891324 -101796530 - L2 LINE L2 -2 3311 3268 262 133 44 0 chr2 148891327 148891372 -101796482 - L2 LINE L2 0 3313 3267 519 267 15 30 chr2 148891374 148891509 -101796345 - L2 LINE L2 0 3313 3181 255 261 76 43 chr2 148892032 148892124 -101795730 - MIR SINE MIR -76 186 92 1844 118 127 135 chr2 148892260 148892779 -101795075 + MLT2B2 LTR ERVL 1 515 0 460 271 29 19 chr2 148892780 148893027 -101794827 - MLT1J2 LTR MaLR -139 367 28 483 231 26 17 chr2 148893128 148893245 -101794609 - FLAM_C SINE Alu -15 118 1 1189 108 0 17 chr2 148893361 148893590 -101794264 + (GGGA)n Simple_repeat Simple_repeat 4 226 0 192 97 0 0 chr2 148900515 148900546 -101787308 + (TTG)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr2 148900676 148900704 -101787150 + AT_rich Low_complexity Low_complexity 1 28 0 645 268 7 0 chr2 148901937 148902079 -101785775 + L2 LINE L2 2922 3064 -249 1795 240 35 15 chr2 148902096 148902554 -101785300 + MLT2B2 LTR ERVL 3 469 -46 455 30 0 45 chr2 148902554 148902620 -101785234 + (TC)n Simple_repeat Simple_repeat 1 63 0 306 0 0 0 chr2 148902620 148902654 -101785200 + (TA)n Simple_repeat Simple_repeat 1 34 0 362 0 0 59 chr2 148902654 148902705 -101785149 + (GA)n Simple_repeat Simple_repeat 1 48 0 359 23 0 0 chr2 148902705 148902748 -101785106 + MLT2B2 LTR ERVL 512 554 0 561 241 110 33 chr2 148902753 148902998 -101784856 + L2 LINE L2 3049 3312 -1 531 323 45 15 chr2 148903071 148903269 -101784585 + MIR3 SINE MIR 4 207 -1 198 0 0 0 chr2 148904114 148904136 -101783718 + (A)n Simple_repeat Simple_repeat 1 22 0 243 260 13 13 chr2 148904766 148904843 -101783011 + CT-rich Low_complexity Low_complexity 1 77 0 1231 183 85 51 chr2 148904882 148905177 -101782677 + AluJo SINE Alu 1 305 -7 207 88 0 0 chr2 148906127 148906161 -101781693 + (T)n Simple_repeat Simple_repeat 1 34 0 1654 255 66 31 chr2 148906425 148907044 -101780810 + L1MC4a LINE L1 7168 7808 0 227 315 11 22 chr2 148907386 148907475 -101780379 + L2 LINE L2 3184 3271 -1 2062 153 39 3 chr2 148907694 148908080 -101779774 + L1MC3 LINE L1 7365 7764 -21 1363 167 0 4 chr2 148908136 148908363 -101779491 - AluJo SINE Alu 0 312 87 205 214 0 0 chr2 148908578 148908620 -101779234 + MIR SINE MIR 192 233 -29 1942 170 3 0 chr2 148910237 148910537 -101777317 - AluJb SINE Alu -11 301 1 438 301 123 50 chr2 148910658 148911136 -101776718 + L1ME4a LINE L1 5606 6118 -3 184 253 63 84 chr2 148912309 148912404 -101775450 + L3 LINE CR1 293 385 -1192 229 243 200 0 chr2 148912722 148912792 -101775062 - L2 LINE L2 -21 3251 3168 814 202 159 14 chr2 148912814 148913236 -101774618 - MLT1F1 LTR MaLR 0 567 16 357 281 142 22 chr2 148913296 148913685 -101774169 + MLT1F LTR MaLR 118 537 -5 202 275 290 0 chr2 148913736 148913805 -101774049 + L2 LINE L2 3183 3271 -42 * 306 312 28 9 chr2 148913800 148913909 -101773945 + L2 LINE L2 2606 2716 -598 2395 63 0 0 chr2 148914045 148914360 -101773494 - AluY SINE Alu 0 315 1 392 292 62 0 chr2 148914380 148914493 -101773361 + L2 LINE L2 3180 3299 -14 776 177 0 0 chr2 148914825 148914949 -101772905 - FLAM_A SINE Alu -5 128 5 21 0 0 0 chr2 148915364 148915385 -101772469 + AT_rich Low_complexity Low_complexity 1 21 0 767 264 58 11 chr2 148915719 148915893 -101771961 - MER5A DNA MER1_type -6 183 2 380 256 18 139 chr2 148915893 148916070 -101771784 - MIR3 SINE MIR -56 152 3 189 235 0 39 chr2 148917175 148917226 -101770628 - L2 LINE L2 -4 3268 3220 41050 30 21 1 chr2 148917279 148923310 -101764544 + L1HS LINE L1 1 6155 0 987 325 102 14 chr2 148923930 148925276 -101762578 + L1ME3A LINE L1 3145 4609 -1537 1867 248 123 16 chr2 148925285 148925354 -101762500 + L1MDa LINE L1 -139 4294967217 -6461 261 0 0 0 chr2 148925354 148925383 -101762471 + (CA)n Simple_repeat Simple_repeat 2 30 0 1867 248 123 16 chr2 148925383 148925941 -101761913 + L1MDa LINE L1 -79 555 -5827 1789 157 30 32 chr2 148925940 148926342 -101761512 + L1MD1 LINE L1 5563 5963 -279 * 996 219 21 59 chr2 148926370 148926745 -101761109 + L1MDa LINE L1 655 1015 -5265 926 199 13 0 chr2 148926745 148926896 -101760958 + FAM SINE Alu 12 164 -21 2636 215 58 27 chr2 148926913 148927725 -101760129 + L1MDa LINE L1 1008 1838 -4546 361 319 78 6 chr2 148927743 148928063 -101759791 + L1ME3A LINE L1 4796 5138 -1008 872 184 0 0 chr2 148928126 148928267 -101759587 + AluJb SINE Alu 2 142 -170 1137 279 66 22 chr2 148928294 148928479 -101759375 + L1ME3A LINE L1 5318 5493 -677 535 88 0 12 chr2 148928479 148928559 -101759295 + MADE1 DNA Mariner 2 80 0 1137 279 66 22 chr2 148928559 148928976 -101758878 + L1ME3A LINE L1 5493 5947 -223 298 235 0 31 chr2 148930205 148930303 -101757551 - HERV16 LTR ERVL -86 4910 4816 2160 144 87 22 chr2 148930314 148930718 -101757136 - MSTB1 LTR MaLR -2 430 1 422 337 15 10 chr2 148930993 148931195 -101756659 - HERV16 LTR ERVL -3494 1502 1300 342 0 0 0 chr2 148932538 148932576 -101755278 + (TG)n Simple_repeat Simple_repeat 2 39 0 23 68 0 0 chr2 148932927 148932971 -101754883 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 148933190 148933220 -101754634 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 148933734 148933755 -101754099 + AT_rich Low_complexity Low_complexity 1 21 0 267 31 0 0 chr2 148934801 148934833 -101753021 + (TGG)n Simple_repeat Simple_repeat 3 34 0 2140 87 0 0 chr2 148935630 148935928 -101751926 + AluY SINE Alu 5 302 0 236 294 67 34 chr2 148936183 148936302 -101751552 + L3 LINE CR1 1415 1537 -40 1801 132 3 7 chr2 148936378 148936673 -101751181 + L1MA4A LINE L1 6006 6299 -4 23 0 0 0 chr2 148937253 148937276 -101750578 + AT_rich Low_complexity Low_complexity 1 23 0 209 358 28 9 chr2 148937985 148938094 -101749760 + MIR SINE MIR 43 153 -109 788 230 16 26 chr2 148938720 148938830 -101749024 - MIR SINE MIR 0 262 153 429 160 13 0 chr2 148938830 148938905 -101748949 + MER116 DNA Mariner 3 78 -2 788 230 16 26 chr2 148938905 148938985 -101748869 - MIR SINE MIR -109 153 74 1175 157 70 35 chr2 148939141 148939371 -101748483 + MER8 DNA MER2_type 2 239 0 971 279 170 24 chr2 148939372 148940054 -101747800 + L2 LINE L2 2535 3313 0 2325 104 0 3 chr2 148940493 148940801 -101747053 - AluSg SINE Alu -3 307 1 601 319 119 8 chr2 148941236 148941596 -101746258 - L1ME4a LINE L1 -209 5912 5513 352 147 44 0 chr2 148942510 148942578 -101745276 - MLT1J2 LTR MaLR -14 436 366 584 227 87 22 chr2 148942694 148942879 -101744975 - MLT1J2 LTR MaLR -245 205 9 4003 178 60 28 chr2 148943053 148943887 -101743967 + MER21B LTR ERV1 3 863 0 1085 189 163 51 chr2 148944244 148944594 -101743260 + MLT1B LTR MaLR 1 389 -1 1790 143 18 11 chr2 148944747 148945027 -101742827 - AluJb SINE Alu -20 292 11 27 49 0 0 chr2 148946388 148946429 -101741425 + AT_rich Low_complexity Low_complexity 1 41 0 1549 185 121 11 chr2 148947057 148947505 -101740349 + LTR54B LTR ERV1 1 497 -1 2222 48 0 7 chr2 148949153 148949426 -101738428 - AluY SINE Alu -9 302 32 368 350 56 17 chr2 148950799 148950979 -101736875 + L1MEd LINE L1 6 192 -5927 420 271 60 77 chr2 148951180 148951673 -101736181 + L1MEd LINE L1 595 1080 -5039 725 181 0 30 chr2 148951673 148951806 -101736048 + FLAM_A SINE Alu 5 133 0 420 271 60 77 chr2 148951806 148951861 -101735993 + L1MEd LINE L1 1080 1134 -4985 491 286 78 65 chr2 148951864 148952297 -101735557 + L1MEd LINE L1 1238 1676 -4453 442 333 40 17 chr2 148952862 148953036 -101734818 + MIR3 SINE MIR 3 180 -28 2204 124 7 7 chr2 148953276 148953582 -101734272 + AluSx SINE Alu 1 306 -6 585 165 0 0 chr2 148953584 148953681 -101734173 + HY3 scRNA scRNA 3 99 -2 248 0 0 30 chr2 148953681 148953714 -101734140 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 912 220 0 0 chr2 148954196 148954369 -101733485 - FAM SINE Alu -1 48 1 2109 130 7 0 chr2 148954712 148955040 -101732814 + AluSq SINE Alu 2 331 0 583 319 103 35 chr2 148955674 148956044 -101731810 - L2 LINE L2 0 3313 2919 2080 158 29 30 chr2 148956534 148957014 -101730840 - MLT2D LTR ERVL -2 462 1 3499 169 34 10 chr2 148957298 148957985 -101729869 - MER39 LTR ERV1 -4 703 1 585 282 93 23 chr2 148958160 148958376 -101729478 + MIR SINE MIR 31 261 -1 1769 125 23 7 chr2 148958566 148958871 -101728983 + L1MA9 LINE L1 5998 6307 -5 480 303 32 27 chr2 148961126 148961314 -101726540 + MIR SINE MIR 6 194 -68 337 335 47 4 chr2 148961362 148961619 -101726235 - L1ME LINE L1 -333 5788 5521 23 0 0 0 chr2 148962367 148962390 -101725464 + AT_rich Low_complexity Low_complexity 1 23 0 188 365 27 40 chr2 148964120 148964269 -101723585 - MIR3 SINE MIR -51 157 57 823 107 0 16 chr2 148964566 148964688 -101723166 - FLAM_C SINE Alu -1 142 23 2156 99 3 0 chr2 148964877 148965185 -101722669 + AluSp SINE Alu 1 309 0 3629 124 28 88 chr2 148965225 148965982 -101721872 + MER50 LTR ERV1 1 711 -23 259 347 27 0 chr2 148966871 148966946 -101720908 + L2 LINE L2 3186 3262 -10 324 0 0 0 chr2 148967249 148967285 -101720569 + (TG)n Simple_repeat Simple_repeat 2 37 0 431 242 159 22 chr2 148967385 148967696 -101720158 - L1ME LINE L1 -341 5780 5423 1154 164 152 42 chr2 148968525 148968835 -101719019 - MER2 DNA MER2_type 0 344 1 1456 234 64 92 chr2 148968853 148969429 -101718425 - MLT1E LTR MaLR -26 567 8 393 75 0 0 chr2 148971063 148971116 -101716738 + (TCCA)n Simple_repeat Simple_repeat 4 56 0 758 162 42 28 chr2 148972018 148972160 -101715694 - FAM SINE Alu -15 170 27 2032 243 260 13 chr2 148972372 148972898 -101714956 - L1MC4 LINE L1 -180 7862 7467 1119 208 71 74 chr2 148972898 148973264 -101714590 - MLT1A1 LTR MaLR 0 365 1 2032 243 260 13 chr2 148973264 148973863 -101713991 - L1MC4 LINE L1 -575 7467 6459 303 27 0 0 chr2 148974365 148974402 -101713452 - MLT2B3 LTR ERVL 0 553 517 290 224 15 0 chr2 148974402 148974432 -101713422 - Ricksha DNA DNA -1143 903 836 2851 145 9 68 chr2 148974432 148974758 -101713096 - MLT2B3 LTR ERVL -40 514 170 2054 152 33 30 chr2 148974758 148975121 -101712733 + THE1B LTR MaLR 1 364 0 11311 103 10 4 chr2 148975122 148976690 -101711164 + THE1B-int LTR MaLR 2 1578 -2 1994 126 43 65 chr2 148976692 148977064 -101710790 + THE1B LTR MaLR 1 364 0 2851 145 9 68 chr2 148977064 148977278 -101710576 - MLT2B3 LTR ERVL -385 169 1 584 276 44 20 chr2 148977279 148977572 -101710282 - L1MEd LINE L1 -3420 2709 2410 6318 74 11 53 chr2 148977621 148978884 -101708970 - SVA Other Other -520 1386 433 912 258 90 51 chr2 148978908 148979655 -101708199 - L1MEd LINE L1 -4863 1256 574 385 278 77 24 chr2 148979935 148980104 -101707750 + MER5B DNA MER1_type 1 178 0 378 252 192 53 chr2 148980169 148980320 -101707534 - MER5B DNA MER1_type 0 178 7 371 239 68 0 chr2 148980335 148980423 -101707431 - MER102a DNA MER1_type 0 330 237 246 233 0 0 chr2 148980562 148980622 -101707232 + (TATG)n Simple_repeat Simple_repeat 4 63 0 202 179 36 0 chr2 148980994 148981050 -101706804 + (TTATA)n Simple_repeat Simple_repeat 5 62 0 691 266 25 55 chr2 148981517 148981754 -101706100 + MIR SINE MIR 12 241 -21 236 254 0 30 chr2 148982744 148982811 -101705043 - L2 LINE L2 -181 3091 3027 233 275 55 73 chr2 148983822 148983931 -101703923 + L2 LINE L2 3182 3288 -25 21 36 0 0 chr2 148984394 148984422 -101703432 + AT_rich Low_complexity Low_complexity 1 28 0 2019 190 115 117 chr2 148984933 148985761 -101702093 - LTR1B LTR ERV1 0 826 1 2565 46 0 3 chr2 148986496 148986800 -101701054 + AluY SINE Alu 1 303 -8 560 314 65 15 chr2 148986958 148987171 -101700683 - MIR SINE MIR 0 262 38 1836 167 23 0 chr2 148987391 148987690 -101700164 - AluSx SINE Alu -6 306 1 2298 108 0 13 chr2 148987734 148988049 -101699805 + AluSq SINE Alu 1 311 -2 180 266 47 31 chr2 148989793 148989857 -101697997 - L2 LINE L2 -54 3218 3154 2386 85 24 3 chr2 148989903 148990244 -101697610 + L1PA11 LINE L1 5824 6171 -3 304 249 69 69 chr2 148990422 148990765 -101697089 + L1ME4a LINE L1 5693 6035 -86 248 139 139 38 chr2 148990836 148990915 -101696939 - L1MD2 LINE L1 0 6359 6273 * 945 176 23 73 chr2 148990899 148991160 -101696694 - L1MDb LINE L1 -4995 1414 1167 188 179 36 54 chr2 148992169 148992225 -101695629 - MIR SINE MIR -72 136 82 340 193 52 104 chr2 148993218 148993353 -101694501 - MIR SINE MIR -74 188 61 180 333 0 0 chr2 148994229 148994274 -101693580 + L2 LINE L2 3211 3255 -17 204 178 0 22 chr2 148994293 148994338 -101693516 - L2 LINE L2 -1 3312 3269 371 244 127 81 chr2 148994348 148994748 -101693106 - MLT1J2 LTR MaLR -7 402 2 212 315 0 41 chr2 148994754 148994827 -101693027 - L2 LINE L2 -53 3219 3150 184 77 0 0 chr2 148994992 148995018 -101692836 + L2 LINE L2 3285 3310 -3 894 285 93 4 chr2 148995519 148996046 -101691808 - L1ME4a LINE L1 -27 6094 5521 2579 40 3 0 chr2 148996460 148996760 -101691094 - AluY SINE Alu -10 301 1 23 0 0 0 chr2 148997803 148997826 -101690028 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr2 148999136 148999165 -101688689 + AT_rich Low_complexity Low_complexity 1 29 0 232 372 18 9 chr2 149000441 149000554 -101687300 + L2 LINE L2 2826 2939 -333 539 290 8 0 chr2 149000742 149000866 -101686988 + L2 LINE L2 3148 3272 0 320 250 98 36 chr2 149002303 149002415 -101685439 - MIR SINE MIR -21 241 123 2236 114 0 0 chr2 149002638 149002935 -101684919 + AluSx SINE Alu 1 297 -15 336 276 129 12 chr2 149003038 149003208 -101684646 - MIR SINE MIR -2 260 71 245 248 74 81 chr2 149003537 149003686 -101684168 - MIR3 SINE MIR -6 202 55 321 374 26 0 chr2 149003746 149003861 -101683993 - L2 LINE L2 -3 3269 3152 686 276 22 11 chr2 149003904 149004089 -101683765 - MIR SINE MIR 0 262 76 539 215 0 9 chr2 149004209 149004316 -101683538 + Tigger7 DNA MER2_type 2385 2490 -1 1133 170 9 36 chr2 149004478 149004702 -101683152 + MER20 DNA MER1_type 2 219 0 301 324 70 42 chr2 149005976 149006118 -101681736 - L2 LINE L2 0 3272 3127 499 296 51 0 chr2 149007017 149007193 -101680661 - MIR SINE MIR -13 249 65 369 267 181 9 chr2 149009165 149009270 -101678584 + MIR SINE MIR 24 146 -62 355 104 15 15 chr2 149009448 149009515 -101678339 - L1PA16 LINE L1 -2 6164 6098 571 179 133 46 chr2 149010138 149010333 -101677521 + MER112 DNA MER1_type 6 217 -43 277 302 94 9 chr2 149010700 149010806 -101677048 - MIR SINE MIR -14 248 134 255 103 0 0 chr2 149011465 149011504 -101676350 + (A)n Simple_repeat Simple_repeat 1 39 0 186 146 36 18 chr2 149013795 149013850 -101674004 + (TA)n Simple_repeat Simple_repeat 2 57 0 21 0 0 0 chr2 149015489 149015510 -101672344 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 149020254 149020284 -101667570 + AT_rich Low_complexity Low_complexity 1 30 0 200 218 18 0 chr2 149022303 149022358 -101665496 + CT-rich Low_complexity Low_complexity 1 56 0 239 130 0 22 chr2 149022358 149022404 -101665450 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 2437 44 0 20 chr2 149025525 149025852 -101662002 + AluY SINE Alu 1 311 0 207 0 0 0 chr2 149026006 149026029 -101661825 + (TG)n Simple_repeat Simple_repeat 1 23 0 198 176 0 0 chr2 149028283 149028317 -101659537 - MIR SINE MIR -120 142 109 2457 66 0 3 chr2 149028573 149028874 -101658980 - AluY SINE Alu -9 302 3 331 206 61 69 chr2 149029028 149029159 -101658695 - MIR3 SINE MIR -37 171 42 196 300 0 33 chr2 149030071 149030131 -101657723 - L2 LINE L2 -340 2973 2916 338 281 133 102 chr2 149032749 149033403 -101654451 + L1M2 LINE L1 678 1351 -5498 204 256 85 61 chr2 149038165 149038247 -101649607 - MIR3 SINE MIR -112 96 13 1818 157 21 11 chr2 149039003 149039289 -101648565 + AluJo SINE Alu 1 289 -23 2393 50 0 99 chr2 149039532 149039875 -101647979 - AluY SINE Alu -2 309 1 371 196 62 0 chr2 149040217 149040314 -101647540 - MLT1L LTR MaLR -170 445 343 245 258 106 15 chr2 149041617 149041749 -101646105 - MLT1K LTR MaLR 0 588 445 794 204 12 4 chr2 149041759 149042018 -101645836 + CT-rich Low_complexity Low_complexity 1 261 0 844 296 86 37 chr2 149042418 149043044 -101644810 + HsTC2 DNA Tc2 235 891 -1007 267 324 53 24 chr2 149043237 149043407 -101644447 + MLT1H LTR MaLR 47 221 -328 296 236 0 34 chr2 149043549 149043638 -101644216 + MLT1H LTR MaLR 448 533 -16 398 322 89 39 chr2 149043827 149044007 -101643847 - L2 LINE L2 -199 3073 2885 2036 144 60 3 chr2 149044063 149044430 -101643424 + MLT1B LTR MaLR 1 388 -2 465 258 154 42 chr2 149044469 149044775 -101643079 - L2 LINE L2 -580 2734 2395 1540 282 85 55 chr2 149044815 149045062 -101642792 + L1MEd LINE L1 4 242 -5877 2380 82 0 7 chr2 149045062 149045366 -101642488 + AluY SINE Alu 1 302 -9 1540 282 85 55 chr2 149045366 149046111 -101641743 + L1MEd LINE L1 242 1025 -5094 286 239 26 43 chr2 149046121 149046238 -101641616 + (CATATA)n Simple_repeat Simple_repeat 4 118 0 376 331 45 0 chr2 149046315 149046448 -101641406 + HAL1 LINE L1 1459 1597 -910 256 279 59 45 chr2 149047185 149047407 -101640447 + L1MEd LINE L1 2138 2362 -3767 2335 104 38 76 chr2 149047433 149047905 -101639949 + SVA Other Other 415 868 -518 6198 72 8 51 chr2 149047956 149048976 -101638878 + SVA Other Other 430 1407 0 330 355 8 33 chr2 149049566 149049687 -101638167 + L2 LINE L2 3154 3271 -1 1222 204 123 60 chr2 149049734 149050199 -101637655 + MLT1D LTR MaLR 12 505 0 248 211 28 42 chr2 149050618 149050689 -101637165 + L2 LINE L2 3244 3313 0 2493 202 24 10 chr2 149050733 149051323 -101636531 + L1MB7 LINE L1 5586 6183 -1 762 270 57 16 chr2 149051831 149052079 -101635775 - MIR SINE MIR 0 262 5 672 276 91 6 chr2 149052165 149052473 -101635381 + L2 LINE L2 2214 2630 -684 795 237 107 35 chr2 149052546 149052863 -101634991 - MLT1J1 LTR MaLR -106 340 1 217 278 19 56 chr2 149055417 149055525 -101632329 - L2 LINE L2 0 3272 3169 255 152 0 0 chr2 149055990 149056036 -101631818 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 4627 187 70 6 chr2 149058340 149059656 -101628198 + Charlie1a DNA MER1_type 1 1452 -3 180 0 0 0 chr2 149061152 149061172 -101626682 + (CAT)n Simple_repeat Simple_repeat 1 20 0 203 250 0 19 chr2 149065336 149065388 -101622466 + GA-rich Low_complexity Low_complexity 2 52 0 222 37 0 0 chr2 149066465 149066492 -101621362 + (A)n Simple_repeat Simple_repeat 1 27 0 451 313 101 17 chr2 149067071 149067368 -101620486 + L3b LINE CR1 1108 1429 -154 324 250 80 0 chr2 149069490 149069590 -101618264 + MER103 DNA DNA 2 109 -57 230 214 0 0 chr2 149069604 149069646 -101618208 - L2 LINE L2 0 3313 3272 388 335 102 10 chr2 149072196 149072393 -101615461 + MIR SINE MIR 35 249 -13 186 196 65 0 chr2 149072513 149072559 -101615295 - L2 LINE L2 -4 3309 3261 2430 82 0 0 chr2 149073415 149073706 -101614148 - AluSc SINE Alu -18 291 1 28 29 0 0 chr2 149073716 149073751 -101614103 + AT_rich Low_complexity Low_complexity 1 35 0 284 247 67 45 chr2 149073800 149073889 -101613965 + MIR SINE MIR 97 187 -75 354 279 240 6 chr2 149073950 149074133 -101613721 + MIR SINE MIR 37 262 0 22 0 0 0 chr2 149074423 149074445 -101613409 + AT_rich Low_complexity Low_complexity 1 22 0 235 111 89 0 chr2 149075124 149075169 -101612685 - L2 LINE L2 0 3313 3265 305 299 36 86 chr2 149075219 149075523 -101612331 - L2 LINE L2 -167 3105 2817 693 303 129 50 chr2 149075660 149075839 -101612015 + HAL1 LINE L1 61 224 -2283 447 19 0 0 chr2 149075839 149075891 -101611963 + (TG)n Simple_repeat Simple_repeat 2 53 0 693 303 129 50 chr2 149075891 149076509 -101611345 + HAL1 LINE L1 224 921 -1586 1144 125 104 12 chr2 149076552 149076792 -101611062 + LTR1 LTR ERV1 1 262 -523 2117 115 19 3 chr2 149076826 149077148 -101610706 + LTR1 LTR ERV1 459 785 0 1747 241 182 42 chr2 149077148 149078532 -101609322 + HAL1 LINE L1 918 2495 -12 246 270 66 40 chr2 149078530 149078682 -101609172 - L1MEd LINE L1 -4896 1223 1068 * 850 227 0 12 chr2 149078682 149078854 -101609000 - FRAM SINE Alu -3 173 4 2231 101 0 0 chr2 149078964 149079250 -101608604 - AluSc SINE Alu -8 301 16 295 257 106 35 chr2 149079264 149079490 -101608364 - L1MEd LINE L1 -5113 1006 765 201 74 0 0 chr2 149079707 149079734 -101608120 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 207 288 17 0 chr2 149080707 149080766 -101607088 + L2 LINE L2 3254 3313 0 2235 108 13 3 chr2 149082554 149082860 -101604994 + AluSx SINE Alu 1 309 -3 723 253 18 45 chr2 149082992 149083213 -101604641 + MIR SINE MIR 34 248 -14 185 344 22 11 chr2 149084617 149084707 -101603147 + MIR SINE MIR 165 255 -7 319 373 80 7 chr2 149085392 149085542 -101602312 + MIR SINE MIR 31 191 -71 24 32 0 0 chr2 149085730 149085761 -101602093 + AT_rich Low_complexity Low_complexity 1 31 0 238 333 0 0 chr2 149086337 149086406 -101601448 + Charlie4 DNA MER1_type 1871 1939 -22 185 319 43 0 chr2 149086426 149086495 -101601359 - L2 LINE L2 0 3313 3242 180 303 45 30 chr2 149086741 149086807 -101601047 + L2 LINE L2 2987 3053 -219 185 254 34 34 chr2 149086855 149086914 -101600940 + L2 LINE L2 3169 3227 -86 444 270 43 92 chr2 149087464 149087649 -101600205 - MER5B DNA MER1_type -1 177 2 1882 106 6 88 chr2 149088159 149088488 -101599366 - AluSg SINE Alu -8 302 1 723 267 15 69 chr2 149088543 149088805 -101599049 + MIR SINE MIR 12 259 -3 2460 223 79 83 chr2 149089520 149090327 -101597527 - MER21B LTR ERV1 -57 806 3 205 295 147 0 chr2 149090472 149090567 -101597287 + L3 LINE CR1 1293 1401 -176 205 176 0 0 chr2 149091189 149091223 -101596631 + T-rich Low_complexity Low_complexity 2 35 0 2006 163 123 5 chr2 149091399 149091780 -101596074 + MSTA LTR MaLR 1 426 -2 1958 186 32 61 chr2 149093251 149093713 -101594141 + L1MB5 LINE L1 5718 6166 -8 446 247 205 0 chr2 149094336 149094532 -101593322 + MIR SINE MIR 19 252 -10 285 58 58 0 chr2 149094704 149094756 -101593098 + (CATATA)n Simple_repeat Simple_repeat 6 60 0 22 35 0 0 chr2 149095183 149095212 -101592642 + AT_rich Low_complexity Low_complexity 1 29 0 258 310 35 0 chr2 149095389 149095476 -101592378 - MIR3 SINE MIR -9 199 110 418 242 16 24 chr2 149095553 149095677 -101592177 + MER103 DNA DNA 11 133 -33 282 56 0 0 chr2 149097418 149097454 -101590400 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 207 216 27 54 chr2 149098782 149098856 -101588998 + A-rich Low_complexity Low_complexity 2 73 0 2217 84 3 32 chr2 149098878 149099187 -101588667 + AluY SINE Alu 1 300 -11 258 116 0 0 chr2 149099616 149099659 -101588195 + (TG)n Simple_repeat Simple_repeat 2 44 0 2131 120 3 0 chr2 149099758 149100050 -101587804 + AluSg SINE Alu 1 293 -17 394 328 25 25 chr2 149101759 149101881 -101585973 - MIR SINE MIR -121 141 20 722 215 87 7 chr2 149102793 149102942 -101584912 - FRAM SINE Alu -16 160 1 2132 141 0 0 chr2 149103395 149103699 -101584155 + AluSx SINE Alu 3 306 -6 202 255 0 0 chr2 149104775 149104822 -101583032 - L2 LINE L2 0 3313 3267 261 83 0 0 chr2 149105211 149105247 -101582607 + (CA)n Simple_repeat Simple_repeat 1 36 0 579 342 73 8 chr2 149106632 149106892 -101580962 + L3 LINE CR1 1228 1504 -73 198 0 0 0 chr2 149107186 149107208 -101580646 + (CA)n Simple_repeat Simple_repeat 1 22 0 879 153 64 0 chr2 149107213 149107370 -101580484 + MER2 DNA MER2_type 178 344 -1 260 347 91 30 chr2 149107370 149107569 -101580285 - L1MC/D LINE L1 -2151 5657 5447 1173 212 86 37 chr2 149107653 149107922 -101579932 + AluJo SINE Alu 1 282 -30 477 209 62 102 chr2 149108329 149108554 -101579300 + L2 LINE L2 3098 3313 0 602 277 114 0 chr2 149108824 149109008 -101578846 - MIR SINE MIR 0 262 58 2278 106 10 0 chr2 149109051 149109353 -101578501 - AluSp SINE Alu -8 305 1 799 189 150 34 chr2 149109479 149109712 -101578142 - MER112 DNA MER1_type 0 260 1 187 302 16 0 chr2 149110055 149110118 -101577736 - MIR3 SINE MIR -133 75 12 2428 64 0 13 chr2 149110310 149110623 -101577231 + AluY SINE Alu 1 309 -2 420 240 74 8 chr2 149110781 149110902 -101576952 - MIR3 SINE MIR -15 193 65 456 35 0 0 chr2 149111715 149111773 -101576081 + (CA)n Simple_repeat Simple_repeat 2 59 0 605 275 145 10 chr2 149112289 149112496 -101575358 + MIR SINE MIR 4 238 -24 413 244 93 114 chr2 149112548 149112794 -101575060 - Charlie8 DNA MER1_type -2170 247 7 500 264 77 34 chr2 149112835 149113043 -101574811 + L2 LINE L2 3093 3309 -4 205 152 0 0 chr2 149113687 149113720 -101574134 + (TCCA)n Simple_repeat Simple_repeat 4 36 0 189 295 16 33 chr2 149113797 149113858 -101573996 - L2 LINE L2 -60 3212 3153 1187 227 20 27 chr2 149113903 149114198 -101573656 + MER99 DNA DNA 535 827 -1 647 187 22 30 chr2 149114248 149114382 -101573472 - FLAM_A SINE Alu 0 133 1 333 0 0 0 chr2 149114538 149114575 -101573279 + (CA)n Simple_repeat Simple_repeat 2 38 0 248 312 65 0 chr2 149114705 149114782 -101573072 - MER102a DNA MER1_type -1 329 248 22 0 0 0 chr2 149114782 149114804 -101573050 + AT_rich Low_complexity Low_complexity 1 22 0 256 367 76 27 chr2 149115413 149115733 -101572121 + L2 LINE L2 2720 3052 -220 218 328 0 0 chr2 149115832 149115893 -101571961 + L2 LINE L2 3251 3311 -2 477 269 131 28 chr2 149115971 149116434 -101571420 + L2 LINE L2 2595 3208 -105 2332 96 3 0 chr2 149116663 149116965 -101570889 - AluSq SINE Alu -10 303 1 188 200 271 35 chr2 149117960 149118045 -101569809 - MIR SINE MIR -7 255 151 2496 174 131 48 chr2 149118045 149118755 -101569099 + LTR1B LTR ERV1 21 785 0 477 211 158 0 chr2 149118758 149118872 -101568982 - MIR SINE MIR -119 143 12 206 300 17 0 chr2 149118879 149118939 -101568915 + MIR SINE MIR 185 245 -17 458 232 221 49 chr2 149119374 149119637 -101568217 + MLT1K LTR MaLR 167 474 -114 244 175 0 0 chr2 149119736 149119776 -101568078 + MLT1K LTR MaLR 527 566 -22 810 204 6 6 chr2 149121710 149121867 -101565987 + LTR33 LTR ERVL 5 161 -360 839 265 44 5 chr2 149121943 149122147 -101565707 + LTR33 LTR ERVL 303 514 -7 346 209 0 0 chr2 149122173 149122240 -101565614 + MER103 DNA DNA 55 121 -45 226 177 16 16 chr2 149122516 149122578 -101565276 + CT-rich Low_complexity Low_complexity 2 63 0 2036 106 0 0 chr2 149122937 149123201 -101564653 + AluSx SINE Alu 1 264 -48 937 199 144 8 chr2 149123241 149123477 -101564377 + L2 LINE L2 2316 2583 -731 482 286 82 11 chr2 149123477 149123659 -101564195 - MIR SINE MIR -48 214 20 226 219 0 0 chr2 149124526 149124567 -101563287 + (CA)n Simple_repeat Simple_repeat 2 42 0 332 192 80 132 chr2 149128831 149128980 -101558874 - MIR3 SINE MIR -7 201 44 211 83 21 21 chr2 149129634 149129682 -101558172 + (TA)n Simple_repeat Simple_repeat 2 49 0 421 255 29 47 chr2 149130249 149130438 -101557416 - MIR SINE MIR -58 150 19 445 301 25 37 chr2 149130983 149131146 -101556708 - MIR3 SINE MIR 0 208 48 2431 76 0 3 chr2 149132371 149132673 -101555181 + AluSc SINE Alu 2 302 -7 748 172 0 8 chr2 149133240 149133374 -101554480 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr2 149133378 149133399 -101554455 + AT_rich Low_complexity Low_complexity 1 21 0 204 300 14 0 chr2 149134027 149134097 -101553757 + (TATG)n Simple_repeat Simple_repeat 2 72 0 25 31 0 0 chr2 149135813 149135845 -101552009 + AT_rich Low_complexity Low_complexity 1 32 0 262 308 26 0 chr2 149138009 149138087 -101549767 + GA-rich Low_complexity Low_complexity 2 81 0 1645 163 10 40 chr2 149138299 149138599 -101549255 - AluJb SINE Alu -21 291 1 622 223 55 28 chr2 149139039 149139200 -101548654 - MIR3 SINE MIR -37 171 6 234 91 0 0 chr2 149139287 149139320 -101548534 + (CA)n Simple_repeat Simple_repeat 2 34 0 987 241 174 6 chr2 149139609 149139949 -101547905 + MLT1H1 LTR MaLR 148 544 -11 225 0 0 0 chr2 149141095 149141120 -101546734 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr2 149141681 149141706 -101546148 + AT_rich Low_complexity Low_complexity 1 25 0 566 282 85 16 chr2 149142073 149142261 -101545593 - MIR SINE MIR -55 207 7 2232 122 0 0 chr2 149142725 149143028 -101544826 - AluSx SINE Alu -9 303 1 2142 139 103 23 chr2 149143377 149143773 -101544081 - MSTC LTR MaLR 0 428 1 926 154 133 26 chr2 149144848 149145081 -101542773 + MSTA LTR MaLR 1 258 -170 451 290 262 16 chr2 149145187 149145553 -101542301 + L3 LINE CR1 1112 1567 -10 2414 88 7 0 chr2 149149017 149149322 -101538532 + AluSg SINE Alu 1 307 -3 236 217 22 0 chr2 149149790 149149836 -101538018 + MIR3 SINE MIR 141 187 -21 262 295 109 39 chr2 149150716 149150872 -101536982 + L3b LINE CR1 1292 1458 -125 1701 141 141 23 chr2 149152703 149153050 -101534804 + MLT1B LTR MaLR 3 390 0 264 265 20 20 chr2 149153559 149153706 -101534148 + (GGGTG)n Simple_repeat Simple_repeat 3 149 0 863 230 72 132 chr2 149154296 149154445 -101533409 - LTR33A LTR ERVL -4 519 363 1398 148 67 14 chr2 149154445 149154729 -101533125 + AluSp SINE Alu 1 299 -4 863 230 72 132 chr2 149154729 149154767 -101533087 - LTR33A LTR ERVL -160 363 324 2358 77 3 10 chr2 149154767 149155064 -101532790 + AluSp SINE Alu 19 313 0 863 230 72 132 chr2 149155064 149155427 -101532427 - LTR33A LTR ERVL -199 324 1 2414 60 0 0 chr2 149156662 149156960 -101530894 - AluY SINE Alu -10 301 4 13643 25 0 4 chr2 149157425 149159806 -101528048 + L1PA2 LINE L1 3779 6155 0 1817 163 21 0 chr2 149159930 149160212 -101527642 + AluJb SINE Alu 1 288 -24 35 24 0 0 chr2 149160215 149160257 -101527597 + AT_rich Low_complexity Low_complexity 1 42 0 848 306 42 31 chr2 149160436 149160822 -101527032 - MLT1K LTR MaLR -55 533 144 277 326 61 0 chr2 149161139 149161237 -101526617 - L2 LINE L2 0 3272 3169 2085 99 15 62 chr2 149161243 149161567 -101526287 + AluSq SINE Alu 2 310 -3 279 300 146 111 chr2 149161587 149161840 -101526014 + MIR SINE MIR 1 262 0 322 243 0 0 chr2 149161846 149161920 -101525934 + MIR SINE MIR 183 256 -6 22 56 0 0 chr2 149162160 149162196 -101525658 + AT_rich Low_complexity Low_complexity 1 36 0 1925 99 0 8 chr2 149162865 149163168 -101524686 - AluSq SINE Alu 0 336 36 189 371 14 0 chr2 149166530 149166600 -101521254 - L2 LINE L2 0 3272 3202 653 190 81 58 chr2 149168473 149168539 -101519315 - MER5A DNA MER1_type -6 183 120 2456 44 24 0 chr2 149168539 149168832 -101519022 + AluY SINE Alu 1 300 -11 653 190 81 58 chr2 149168832 149168939 -101518915 - MER5A DNA MER1_type -69 120 6 1951 99 3 25 chr2 149169442 149169724 -101518130 - AluSx SINE Alu -16 296 21 273 29 0 0 chr2 149169924 149169958 -101517896 + (CA)n Simple_repeat Simple_repeat 2 35 0 1695 169 89 0 chr2 149170714 149171028 -101516826 + MER7A DNA MER2_type 1 340 -6 406 255 0 0 chr2 149171374 149171468 -101516386 - L2 LINE L2 -21 3292 3199 1995 117 3 72 chr2 149171637 149171970 -101515884 - AluSx SINE Alu 0 312 3 1823 133 72 0 chr2 149172514 149172813 -101515041 + AluSg SINE Alu 1 318 0 189 338 14 14 chr2 149173619 149173693 -101514161 - L3b LINE CR1 -156 1427 1354 210 171 0 0 chr2 149175025 149175066 -101512788 + CT-rich Low_complexity Low_complexity 3 43 0 195 182 0 0 chr2 149177869 149177902 -101509952 + MIR SINE MIR 118 150 -112 29 0 0 0 chr2 149177965 149177994 -101509860 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr2 149178152 149178196 -101509658 + AT_rich Low_complexity Low_complexity 1 44 0 1967 157 130 17 chr2 149179225 149179825 -101508029 + MER39 LTR ERV1 1 707 0 598 302 16 0 chr2 149180172 149180354 -101507500 - MER5A DNA MER1_type -3 186 2 214 294 15 0 chr2 149180760 149180828 -101507026 - L2 LINE L2 -1 3271 3203 298 291 99 35 chr2 149181306 149181478 -101506376 + MER5A DNA MER1_type 1 183 -6 402 294 29 6 chr2 149181862 149182032 -101505822 - L1ME LINE L1 -386 5735 5562 464 311 26 21 chr2 149184714 149184904 -101502950 + MIR SINE MIR 14 204 -58 194 100 0 60 chr2 149185106 149185144 -101502710 + (T)n Simple_repeat Simple_repeat 1 37 -10 7709 20 0 0 chr2 149185144 149186062 -101501792 - L1PA2 LINE L1 0 6155 5237 194 100 0 60 chr2 149186062 149186073 -101501781 + (T)n Simple_repeat Simple_repeat 37 47 0 27567 41 41 3 chr2 149186342 149189836 -101498018 - L1P LINE L1 -2518 3628 3 2003 202 62 27 chr2 149190061 149190546 -101497308 + MLT1D LTR MaLR 2 503 -2 515 206 9 12 chr2 149191975 149192106 -101495748 - L1MA9 LINE L1 -1 6290 6168 233 247 14 27 chr2 149192389 149192462 -101495392 + MLT1L LTR MaLR 7 78 -537 476 290 54 33 chr2 149192678 149192927 -101494927 + MLT1L LTR MaLR 335 615 0 344 337 149 11 chr2 149193020 149193195 -101494659 + MIR SINE MIR 8 206 -56 2320 75 0 10 chr2 149194029 149194334 -101493520 - AluY SINE Alu -9 302 1 360 0 0 0 chr2 149194424 149194464 -101493390 + (CA)n Simple_repeat Simple_repeat 2 41 0 356 323 77 45 chr2 149195845 149196065 -101491789 - MIR SINE MIR -33 229 3 1041 119 80 0 chr2 149196088 149196264 -101491590 + L1PB1 LINE L1 5958 6147 -4 922 175 27 38 chr2 149196364 149196547 -101491307 - AluJo SINE Alu -92 220 40 196 351 82 52 chr2 149196643 149196777 -101491077 + MIR3 SINE MIR 9 146 -62 253 272 130 56 chr2 149197311 149197473 -101490381 + L2 LINE L2 2603 2776 -538 227 284 75 0 chr2 149197548 149197615 -101490239 - L2 LINE L2 -16 3297 3226 518 219 31 0 chr2 149197800 149197928 -101489926 + L1ME1 LINE L1 3281 3412 -2734 771 284 59 10 chr2 149197973 149198276 -101489578 + L1ME1 LINE L1 3589 3906 -2240 183 100 0 0 chr2 149199435 149199465 -101488389 + (T)n Simple_repeat Simple_repeat 1 30 0 283 333 69 21 chr2 149200672 149200816 -101487038 + L2 LINE L2 3116 3266 -6 1691 256 57 15 chr2 149200934 149201531 -101486323 + L1ME1 LINE L1 4052 4673 -1473 792 254 52 24 chr2 149201538 149201751 -101486103 + MER58A DNA MER1_type 6 224 0 510 316 48 0 chr2 149201751 149201979 -101485875 + L1ME1 LINE L1 4668 4906 -1240 2532 215 42 18 chr2 149201981 149202605 -101485249 + L1ME1 LINE L1 5257 5895 -271 321 415 47 5 chr2 149203464 149203657 -101484197 - MIR3 SINE MIR -2 206 6 189 0 0 0 chr2 149204748 149204769 -101483085 + (ATG)n Simple_repeat Simple_repeat 3 23 0 309 26 0 0 chr2 149205163 149205201 -101482653 + (GA)n Simple_repeat Simple_repeat 1 38 0 305 231 66 56 chr2 149207276 149207453 -101480401 + LTR33A LTR ERVL 1 164 -359 2048 121 7 0 chr2 149208334 149208643 -101479211 - AluSx SINE Alu 0 311 1 546 328 57 10 chr2 149208975 149209167 -101478687 + MIR SINE MIR 50 250 -12 274 333 17 17 chr2 149209215 149209335 -101478519 + L2 LINE L2 2214 2333 -981 455 209 31 163 chr2 149209880 149210076 -101477778 - MER5A DNA MER1_type 0 189 20 420 202 0 0 chr2 149210190 149210274 -101477580 + MER66B LTR ERV1 1 84 -402 278 226 48 0 chr2 149210276 149210338 -101477516 + MER66A LTR ERV1 414 478 0 713 260 121 0 chr2 149210339 149210562 -101477292 + MIR SINE MIR 7 256 -6 228 333 104 37 chr2 149210607 149210742 -101477112 + L2 LINE L2 3128 3271 -1 328 280 80 0 chr2 149211956 149212056 -101475798 + L2 LINE L2 3206 3313 0 182 316 70 0 chr2 149212255 149212312 -101475542 - L2 LINE L2 -38 3275 3215 223 244 217 35 chr2 149213071 149213186 -101474668 - MIR SINE MIR -30 232 97 2071 163 39 16 chr2 149214931 149215312 -101472542 - MLT1B LTR MaLR 0 390 1 376 322 96 23 chr2 149219160 149219505 -101468349 + HAL1b LINE L1 310 679 -669 24 0 0 0 chr2 149220078 149220102 -101467752 + AT_rich Low_complexity Low_complexity 1 24 0 313 203 128 45 chr2 149220177 149220310 -101467544 + L1ME4a LINE L1 5967 6110 -11 2096 77 80 0 chr2 149221658 149221945 -101465909 - AluSg SINE Alu 0 310 1 231 276 0 0 chr2 149225519 149225595 -101462259 + (TA)n Simple_repeat Simple_repeat 1 76 0 309 51 0 0 chr2 149228011 149228050 -101459804 + (T)n Simple_repeat Simple_repeat 1 39 0 432 55 0 0 chr2 149228374 149228429 -101459425 + (CA)n Simple_repeat Simple_repeat 1 55 0 498 319 12 6 chr2 149229377 149229546 -101458308 - MIR3 SINE MIR 0 208 39 1781 177 3 16 chr2 149229830 149230146 -101457708 - AluJb SINE Alu 0 312 1 184 263 0 0 chr2 149230306 149230344 -101457510 + MIR SINE MIR 210 247 -15 264 155 52 17 chr2 149231049 149231107 -101456747 - L1ME2 LINE L1 -5 6159 6100 4587 132 14 46 chr2 149231110 149231914 -101455940 + Tigger1 DNA MER2_type 2 779 -1639 7997 124 45 5 chr2 149232014 149233336 -101454518 + Tigger1 DNA MER2_type 1043 2418 0 2336 245 64 11 chr2 149233336 149234128 -101453726 - L1ME2 LINE L1 -64 6100 5352 234 0 0 0 chr2 149234128 149234154 -101453700 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 333 0 0 0 chr2 149234153 149234190 -101453664 + (CA)n Simple_repeat Simple_repeat 2 38 0 2336 245 64 11 chr2 149234154 149234276 -101453578 - L1ME2 LINE L1 -812 5352 5176 2198 114 0 0 chr2 149234315 149234604 -101453250 + AluSx SINE Alu 1 289 -23 621 141 24 10 chr2 149238177 149238336 -101449518 + MLT1A1 LTR MaLR 3 225 -140 183 305 85 0 chr2 149238445 149238504 -101449350 - L2 LINE L2 -1 3312 3249 663 332 70 4 chr2 149238598 149238842 -101449012 + MIR SINE MIR 3 262 0 183 80 0 0 chr2 149239612 149239637 -101448217 + (A)n Simple_repeat Simple_repeat 1 25 0 976 81 0 15 chr2 149239830 149239966 -101447888 + THE1A LTR MaLR 222 355 0 11894 87 8 2 chr2 149239966 149241537 -101446317 + THE1A-int LTR MaLR 1 1580 0 2506 106 6 14 chr2 149241537 149241895 -101445959 + THE1A LTR MaLR 1 355 0 350 267 108 17 chr2 149241974 149242094 -101445760 - L2 LINE L2 -1 3312 3182 783 364 58 44 chr2 149242325 149243036 -101444818 + L2 LINE L2 2036 2756 -558 185 0 0 39 chr2 149243048 149243074 -101444780 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1552 196 18 4 chr2 149243076 149243352 -101444502 - AluJo SINE Alu -32 280 1 247 391 63 46 chr2 149243602 149243784 -101444070 + L2 LINE L2 3027 3215 -57 950 220 51 9 chr2 149243784 149243998 -101443856 - MER58A DNA MER1_type -1 223 1 247 391 63 46 chr2 149243998 149244053 -101443801 + L2 LINE L2 3215 3268 -4 21 36 0 0 chr2 149246637 149246665 -101441189 + AT_rich Low_complexity Low_complexity 1 28 0 699 304 64 5 chr2 149246733 149246953 -101440901 - MIR SINE MIR -10 252 20 400 330 107 28 chr2 149246998 149247353 -101440501 - L1ME4a LINE L1 -62 6059 5677 358 252 126 0 chr2 149249456 149249567 -101438287 - MIR SINE MIR -3 259 135 354 316 101 21 chr2 149249820 149250057 -101437797 + L1ME4a LINE L1 5760 6015 -106 968 319 102 42 chr2 149250389 149251007 -101436847 + L2 LINE L2 2321 2975 -339 391 291 77 9 chr2 149251020 149251176 -101436678 - MIR SINE MIR -28 180 7 184 301 106 53 chr2 149251248 149251361 -101436493 - L3 LINE CR1 -21 1556 1438 1680 196 112 32 chr2 149251971 149252434 -101435420 + MLT1D LTR MaLR 2 501 -4 372 271 168 21 chr2 149252912 149253251 -101434603 + MLT1J LTR MaLR 25 413 -98 1777 173 14 0 chr2 149253252 149253547 -101434307 - AluJo SINE Alu -13 299 1 207 139 0 0 chr2 149254431 149254467 -101433387 + (GGAGA)n Simple_repeat Simple_repeat 5 40 0 235 326 3 0 chr2 149255004 149255096 -101432758 + MIR SINE MIR 24 116 -92 201 222 99 49 chr2 149255239 149255320 -101432534 + L2 LINE L2 3187 3271 -1 349 281 214 0 chr2 149257450 149257628 -101430226 + MIR SINE MIR 28 243 -19 34 79 0 0 chr2 149258572 149258648 -101429206 + AT_rich Low_complexity Low_complexity 1 76 0 1851 151 24 7 chr2 149259121 149259412 -101428442 - AluJb SINE Alu -16 296 1 357 285 43 48 chr2 149263486 149263693 -101424161 - LTR33A LTR ERVL -61 462 257 3988 101 12 9 chr2 149263849 149264433 -101423421 + L1PA16 LINE L1 5577 6162 -4 1599 230 3 11 chr2 149265047 149265412 -101422442 - MLT1A1 LTR MaLR 0 365 4 1017 149 100 71 chr2 149265413 149265694 -101422160 + LTR12 LTR ERV1 1 289 -425 320 169 0 0 chr2 149265694 149265759 -101422095 + LTR30 LTR ERV1 556 620 -102 658 145 0 0 chr2 149265759 149265883 -101421971 + LTR12 LTR ERV1 355 714 0 270 136 0 0 chr2 149266761 149266805 -101421049 + (CAG)n Simple_repeat Simple_repeat 1 44 0 198 71 0 0 chr2 149267284 149267312 -101420542 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 240 35 0 0 chr2 149269448 149269477 -101418377 + (T)n Simple_repeat Simple_repeat 1 29 0 234 0 0 0 chr2 149320147 149320173 -101367681 + (T)n Simple_repeat Simple_repeat 1 26 0 250 292 85 8 chr2 149320285 149320415 -101367439 + MIR SINE MIR 110 249 -13 232 258 30 15 chr2 149320434 149320500 -101367354 + L2 LINE L2 3247 3313 0 2165 119 10 0 chr2 149320866 149321159 -101366695 - AluSx SINE Alu -16 296 1 617 251 80 30 chr2 149321897 149322096 -101365758 - MER63A DNA MER1_type 0 210 2 299 206 0 0 chr2 149322917 149322980 -101364874 - MLT1K LTR MaLR -10 578 516 319 236 34 34 chr2 149323134 149323223 -101364631 - MLT1K LTR MaLR -325 263 175 1032 183 87 4 chr2 149323342 149323571 -101364283 - AluJo SINE Alu -20 292 45 518 196 0 0 chr2 149324818 149324915 -101362939 - L1PA16 LINE L1 -25 6141 6045 2195 68 39 36 chr2 149325252 149325560 -101362294 + AluY SINE Alu 1 309 -2 181 222 0 28 chr2 149325710 149325746 -101362108 + MIR SINE MIR 48 82 -180 512 284 28 7 chr2 149327942 149328083 -101359771 - MIR SINE MIR -85 177 34 6576 74 25 3 chr2 149328347 149330378 -101357476 + L1PA7 LINE L1 3934 6148 -6 1559 120 0 4 chr2 149330378 149330625 -101357229 + L1MA3 LINE L1 6054 6302 -3 244 100 25 0 chr2 149330810 149330850 -101357004 + MLT1E1 LTR MaLR 119 159 -495 * 1226 226 50 9 chr2 149330845 149331324 -101356530 + MLT1E1 LTR MaLR 123 653 -1 1222 153 0 19 chr2 149331553 149331762 -101356092 + AluSg/x SINE Alu 106 310 0 504 158 0 0 chr2 149333378 149333511 -101354343 + (TG)n Simple_repeat Simple_repeat 1 133 0 364 266 117 53 chr2 149334775 149334963 -101352891 + L2 LINE L2 3114 3313 0 329 316 20 71 chr2 149336603 149336856 -101350998 - L2 LINE L2 -51 3262 3023 25 0 0 0 chr2 149339113 149339138 -101348716 + AT_rich Low_complexity Low_complexity 1 25 0 206 250 90 76 chr2 149340332 149340476 -101347378 - MIR3 SINE MIR -61 147 2 188 282 0 0 chr2 149340578 149340617 -101347237 + L2 LINE L2 3266 3304 -9 390 299 58 7 chr2 149340752 149340889 -101346965 - MIR SINE MIR -88 174 31 499 293 118 24 chr2 149341436 149341648 -101346206 + MIR SINE MIR 31 262 0 350 339 63 47 chr2 149342276 149342823 -101345031 + L2 LINE L2 2716 3272 0 1302 134 0 42 chr2 149343443 149343660 -101344194 + AluJb SINE Alu 87 294 -18 23 0 0 0 chr2 149343664 149343687 -101344167 + AT_rich Low_complexity Low_complexity 1 23 0 424 214 206 0 chr2 149344512 149344643 -101343211 - MER103 DNA DNA -3 163 6 537 128 12 0 chr2 149344770 149344856 -101342998 - AluS SINE Alu -226 87 1 250 393 45 9 chr2 149348141 149348253 -101339601 - L2 LINE L2 -20 3252 3137 242 36 0 0 chr2 149349534 149349562 -101338292 + (T)n Simple_repeat Simple_repeat 1 28 0 203 261 0 0 chr2 149350258 149350304 -101337550 + (TATG)n Simple_repeat Simple_repeat 2 47 0 302 259 0 37 chr2 149350304 149350412 -101337442 + L1MC4 LINE L1 6608 6711 -1331 1982 132 0 10 chr2 149350611 149350900 -101336954 - AluSg SINE Alu -24 286 1 252 283 0 0 chr2 149351075 149351135 -101336719 - MIR3 SINE MIR -11 197 138 917 250 55 34 chr2 149351879 149352115 -101335739 - MIR SINE MIR 0 262 22 279 313 143 41 chr2 149356844 149356991 -101330863 - L2 LINE L2 -6 3266 3105 21 71 0 0 chr2 149357892 149357934 -101329920 + AT_rich Low_complexity Low_complexity 1 42 0 436 318 150 26 chr2 149360071 149360496 -101327358 + L2 LINE L2 2590 3054 -259 389 228 22 33 chr2 149363122 149363302 -101324552 + (TA)n Simple_repeat Simple_repeat 1 178 0 452 246 40 8 chr2 149363573 149363699 -101324155 + MER94 DNA DNA 1 130 -4 318 362 43 74 chr2 149363724 149364116 -101323738 - L2 LINE L2 -6 3266 2887 250 320 41 25 chr2 149364414 149364536 -101323318 + MER5A DNA MER1_type 36 159 -30 624 332 10 15 chr2 149364715 149364920 -101322934 + MIR SINE MIR 59 262 0 231 217 83 0 chr2 149366661 149366721 -101321133 + MER112 DNA MER1_type 4 68 -192 237 196 0 0 chr2 149366721 149366777 -101321077 + CT-rich Low_complexity Low_complexity 2 57 0 315 0 0 0 chr2 149366843 149366878 -101320976 + (TA)n Simple_repeat Simple_repeat 2 36 0 715 219 15 63 chr2 149366901 149367106 -101320748 + MER112 DNA MER1_type 66 260 0 340 310 0 20 chr2 149367149 149367249 -101320605 + CT-rich Low_complexity Low_complexity 4 101 0 674 280 114 50 chr2 149368816 149369395 -101318459 - L1ME4a LINE L1 -5 6116 5501 519 326 11 17 chr2 149369648 149369823 -101318031 + MER8 DNA MER2_type 4 177 -62 282 211 0 66 chr2 149369856 149369932 -101317922 - Tigger2 DNA MER2_type -2645 73 3 341 340 71 24 chr2 149369995 149370248 -101317606 - L1ME4a LINE L1 -1424 4722 4458 337 336 92 9 chr2 149370936 149371153 -101316701 + MIR SINE MIR 1 235 -27 181 288 30 15 chr2 149371730 149371796 -101316058 - L2 LINE L2 0 3313 3247 209 331 59 15 chr2 149371809 149371945 -101315909 - MIR SINE MIR -11 251 110 234 0 0 0 chr2 149372057 149372083 -101315771 + (A)n Simple_repeat Simple_repeat 1 26 0 1885 112 20 34 chr2 149372290 149372584 -101315270 + AluSc SINE Alu 4 293 -16 445 309 73 66 chr2 149373330 149373631 -101314223 - L2 LINE L2 -3 3310 3008 263 286 31 31 chr2 149373707 149373805 -101314049 - L2 LINE L2 -626 2688 2591 201 198 28 0 chr2 149373981 149374087 -101313767 + (TA)n Simple_repeat Simple_repeat 2 110 0 497 291 172 0 chr2 149374193 149374344 -101313510 - MER5A DNA MER1_type -1 188 12 2020 133 0 3 chr2 149374481 149374790 -101313064 - AluSq SINE Alu -5 308 1 28 0 0 0 chr2 149374790 149374818 -101313036 + AT_rich Low_complexity Low_complexity 1 28 0 331 277 128 14 chr2 149375008 149375149 -101312705 - MER5B DNA MER1_type -19 159 3 22 35 0 0 chr2 149375226 149375255 -101312599 + AT_rich Low_complexity Low_complexity 1 29 0 215 314 0 0 chr2 149375534 149375604 -101312250 + (TA)n Simple_repeat Simple_repeat 2 71 0 30 0 0 0 chr2 149376313 149376343 -101311511 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 149380088 149380109 -101307745 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 149380697 149380726 -101307128 + (CA)n Simple_repeat Simple_repeat 2 30 0 978 159 49 0 chr2 149380762 149380925 -101306929 + MER20 DNA MER1_type 49 219 0 218 271 100 0 chr2 149381045 149381115 -101306739 - L2 LINE L2 0 3313 3237 207 100 0 0 chr2 149381627 149381657 -101306197 + (T)n Simple_repeat Simple_repeat 1 30 0 197 270 180 47 chr2 149382025 149382079 -101305775 - MIR SINE MIR -1 261 216 275 0 0 28 chr2 149382079 149382115 -101305739 + (TG)n Simple_repeat Simple_repeat 2 36 0 197 270 180 47 chr2 149382115 149382271 -101305583 - MIR SINE MIR -46 216 23 2305 209 116 2 chr2 149383183 149383767 -101304087 + MLT1E1 LTR MaLR 1 651 -3 422 293 65 56 chr2 149384030 149384245 -101303609 - MIR SINE MIR -34 228 12 27 0 0 0 chr2 149384709 149384736 -101303118 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr2 149384938 149384960 -101302894 + AT_rich Low_complexity Low_complexity 1 22 0 257 173 19 0 chr2 149384991 149385043 -101302811 + MER116 DNA Mariner 23 75 -5 5830 56 17 3 chr2 149385115 149385868 -101301986 - L1PA7 LINE L1 -3 6151 5388 26 30 0 0 chr2 149385868 149385901 -101301953 + AT_rich Low_complexity Low_complexity 1 33 0 7215 42 21 0 chr2 149385981 149387577 -101300277 - L1P_orf2extended LINE L1 -743 8547 4995 286 282 34 0 chr2 149388796 149388913 -101298941 + (TA)n Simple_repeat Simple_repeat 1 121 0 428 306 117 29 chr2 149389761 149390147 -101297707 + MLT1J1 LTR MaLR 27 446 0 338 272 199 22 chr2 149391626 149391762 -101296092 + MIR SINE MIR 66 225 -37 27 73 0 0 chr2 149391785 149391840 -101296014 + AT_rich Low_complexity Low_complexity 1 55 0 1858 105 49 0 chr2 149393636 149393921 -101293933 + L1PA14 LINE L1 5862 6160 -1 767 335 9 0 chr2 149395442 149395669 -101292185 + MIR SINE MIR 34 262 0 782 208 133 61 chr2 149395941 149396234 -101291620 + MLT1J1 LTR MaLR 131 444 -2 480 224 0 10 chr2 149397085 149397183 -101290671 - MER115 DNA AcHobo -7 686 590 355 273 11 0 chr2 149397208 149397296 -101290558 + MIR SINE MIR 172 260 -2 22 56 0 0 chr2 149397832 149397868 -101289986 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr2 149397989 149398013 -101289841 + AT_rich Low_complexity Low_complexity 1 24 0 244 315 11 0 chr2 149398628 149398720 -101289134 + G-rich Low_complexity Low_complexity 3 95 0 284 262 95 63 chr2 149399041 149399167 -101288687 + L2 LINE L2 3184 3313 0 764 114 0 0 chr2 149399237 149399351 -101288503 - L1PA10 LINE L1 -1 6167 6054 3115 105 0 2 chr2 149399368 149399817 -101288037 - L1PB1 LINE L1 -5 6146 5699 283 263 74 0 chr2 149399900 149399995 -101287859 - L1MC/D LINE L1 -2329 5479 5378 634 325 122 43 chr2 149400259 149400556 -101287298 - L1MC/D LINE L1 -2206 3940 3668 1885 145 17 0 chr2 149400556 149400846 -101287008 - AluSx SINE Alu -17 295 1 634 325 122 43 chr2 149400846 149401338 -101286516 - L1MC/D LINE L1 -2478 3668 3089 23 78 0 0 chr2 149401344 149401395 -101286459 + AT_rich Low_complexity Low_complexity 1 51 0 360 0 0 0 chr2 149401530 149401570 -101286284 + (CA)n Simple_repeat Simple_repeat 1 40 0 1210 211 0 21 chr2 149401725 149401962 -101285892 + AluJo SINE Alu 2 233 -79 372 258 105 38 chr2 149402568 149402905 -101284949 + L1MEd LINE L1 969 1373 -4862 518 293 170 36 chr2 149403223 149403864 -101283990 + L2 LINE L2 2554 3313 0 1976 144 7 3 chr2 149404271 149404576 -101283278 - AluSx SINE Alu -6 306 1 712 228 108 85 chr2 149404685 149404992 -101282862 + L2 LINE L2 2997 3310 -3 42 20 0 0 chr2 149405333 149405382 -101282472 + AT_rich Low_complexity Low_complexity 1 49 0 21 95 0 0 chr2 149405458 149405521 -101282333 + AT_rich Low_complexity Low_complexity 1 63 0 2075 183 0 6 chr2 149405561 149405911 -101281943 - MER7A DNA MER2_type 0 346 1 22 0 0 0 chr2 149406664 149406686 -101281168 + AT_rich Low_complexity Low_complexity 1 22 0 42 48 0 0 chr2 149407152 149407215 -101280639 + AT_rich Low_complexity Low_complexity 1 63 0 183 156 0 0 chr2 149407260 149407292 -101280562 + GA-rich Low_complexity Low_complexity 2 33 0 405 0 0 0 chr2 149407465 149407510 -101280344 + (TA)n Simple_repeat Simple_repeat 2 46 0 738 268 197 25 chr2 149408434 149408759 -101279095 + MLT1J2 LTR MaLR 23 403 -47 727 317 30 23 chr2 149409353 149409788 -101278066 + HAL1b LINE L1 104 541 -807 185 237 136 0 chr2 149410781 149410840 -101277014 + L2 LINE L2 3204 3270 -2 24 53 0 0 chr2 149411718 149411756 -101276098 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 149412288 149412309 -101275545 + AT_rich Low_complexity Low_complexity 1 21 0 220 350 19 39 chr2 149415618 149415721 -101272133 - MIR3 SINE MIR -18 190 90 377 242 130 37 chr2 149415746 149415907 -101271947 + MIR SINE MIR 27 202 -60 294 29 0 0 chr2 149418151 149418186 -101269668 + (CA)n Simple_repeat Simple_repeat 2 36 0 324 337 86 35 chr2 149419587 149419905 -101267949 + L2 LINE L2 2728 3063 -209 208 341 89 30 chr2 149420046 149420181 -101267673 + L2 LINE L2 3161 3303 -10 23 0 0 0 chr2 149420369 149420392 -101267462 + AT_rich Low_complexity Low_complexity 1 23 0 2080 116 13 0 chr2 149421744 149422047 -101265807 - AluSg SINE Alu -3 307 1 22 70 0 0 chr2 149423179 149423222 -101264632 + AT_rich Low_complexity Low_complexity 1 43 0 336 48 0 0 chr2 149424732 149424774 -101263080 + (TG)n Simple_repeat Simple_repeat 2 43 0 22 0 0 0 chr2 149425474 149425496 -101262358 + AT_rich Low_complexity Low_complexity 1 22 0 334 0 43 0 chr2 149426346 149426392 -101261462 + (TAA)n Simple_repeat Simple_repeat 2 49 0 486 244 0 0 chr2 149427547 149427682 -101260172 + (TG)n Simple_repeat Simple_repeat 2 136 0 447 266 89 6 chr2 149427871 149428040 -101259814 + MIR SINE MIR 76 258 -4 2190 109 16 0 chr2 149428332 149428654 -101259200 - L1PA14 LINE L1 -2 6159 5833 30 0 0 0 chr2 149431339 149431369 -101256485 + AT_rich Low_complexity Low_complexity 1 30 0 1869 174 38 59 chr2 149432832 149433309 -101254545 + MLT1C LTR MaLR 1 467 0 684 106 8 16 chr2 149433340 149433463 -101254391 + (GGAA)n Simple_repeat Simple_repeat 1 122 0 249 277 15 0 chr2 149434748 149434813 -101253041 - MIR3 SINE MIR -6 202 137 353 282 8 51 chr2 149434974 149435091 -101252763 + MER94 DNA DNA 19 130 -4 197 280 0 0 chr2 149435111 149435161 -101252693 + MIR SINE MIR 165 214 -48 235 250 174 11 chr2 149435192 149435284 -101252570 - MIR SINE MIR -155 107 1 411 21 0 0 chr2 149435963 149436011 -101251843 + (CA)n Simple_repeat Simple_repeat 1 48 0 203 79 26 0 chr2 149436497 149436535 -101251319 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 180 370 0 0 chr2 149438210 149438264 -101249590 + L3 LINE CR1 1513 1566 -11 36 0 0 0 chr2 149438784 149438820 -101249034 + AT_rich Low_complexity Low_complexity 1 36 0 1838 150 11 3 chr2 149440696 149440982 -101246872 + AluJo SINE Alu 1 288 -24 2327 97 0 0 chr2 149441839 149442150 -101245704 - AluY SINE Alu 0 311 1 642 279 54 20 chr2 149442169 149442373 -101245481 + MIR SINE MIR 6 216 -46 21 0 0 0 chr2 149442495 149442516 -101245338 + AT_rich Low_complexity Low_complexity 1 21 0 217 277 15 0 chr2 149442533 149442598 -101245256 - MIR SINE MIR -10 252 187 1691 147 6 41 chr2 149443127 149443441 -101244413 - AluJb SINE Alu -9 303 1 333 0 0 0 chr2 149443450 149443487 -101244367 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 410 130 0 0 chr2 149443489 149443558 -101244296 - L1PB1 LINE L1 -13 6138 6070 264 224 0 0 chr2 149444001 149444068 -101243786 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 1087 45 0 0 chr2 149444205 149444337 -101243517 + L1PA8 LINE L1 6031 6162 -10 21 0 0 0 chr2 149444841 149444862 -101242992 + AT_rich Low_complexity Low_complexity 1 21 0 1619 26 0 0 chr2 149444991 149445182 -101242672 - L1PA3 LINE L1 -4 6151 5961 212 344 58 39 chr2 149445500 149445654 -101242200 + MIR SINE MIR 1 157 -105 225 178 0 0 chr2 149445655 149445700 -101242154 + GA-rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr2 149446098 149446119 -101241735 + AT_rich Low_complexity Low_complexity 1 21 0 296 338 45 26 chr2 149449727 149449881 -101237973 - MIR SINE MIR -98 164 8 225 0 0 0 chr2 149450461 149450486 -101237368 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1541 132 85 4 chr2 149450496 149450754 -101237100 - AluSx SINE Alu -33 279 1 208 135 0 0 chr2 149451283 149451345 -101236509 + (T)n Simple_repeat Simple_repeat 1 62 0 479 293 56 30 chr2 149451608 149451806 -101236048 - L2 LINE L2 -1 3312 3110 665 161 0 9 chr2 149451983 149452095 -101235759 - AluSx SINE Alu -6 304 194 911 145 7 7 chr2 149452097 149452242 -101235612 - AluSx SINE Alu -166 147 3 1483 351 107 21 chr2 149452244 149453176 -101234678 - L2 LINE L2 -342 2972 1961 191 327 112 72 chr2 149453171 149453422 -101234432 - L2 LINE L2 -32 3240 2980 * 353 393 17 38 chr2 149453517 149453807 -101234047 - L2 LINE L2 -466 2848 2565 21 0 0 0 chr2 149454315 149454336 -101233518 + AT_rich Low_complexity Low_complexity 1 21 0 452 304 67 36 chr2 149454760 149454954 -101232900 - MIR3 SINE MIR -3 205 6 1293 205 17 33 chr2 149455103 149455405 -101232449 - AluJo SINE Alu -15 297 1 30 0 0 0 chr2 149456995 149457025 -101230829 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 149457925 149457947 -101229907 + AT_rich Low_complexity Low_complexity 1 22 0 210 143 0 0 chr2 149459416 149459451 -101228403 + (TTTC)n Simple_repeat Simple_repeat 3 37 0 21 0 0 0 chr2 149460806 149460827 -101227027 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 149461963 149461985 -101225869 + AT_rich Low_complexity Low_complexity 1 22 0 853 183 13 0 chr2 149462205 149462358 -101225496 - FRAM SINE Alu -22 154 1 418 206 71 32 chr2 149462813 149462968 -101224886 + MER103 DNA DNA 3 163 -3 2255 82 0 61 chr2 149464636 149464965 -101222889 - AluY SINE Alu -2 309 1 261 305 106 21 chr2 149465615 149465756 -101222098 - MIR SINE MIR -66 142 32 186 43 0 0 chr2 149467833 149467856 -101219998 + (GGGA)n Simple_repeat Simple_repeat 2 24 0 567 234 58 0 chr2 149468666 149468803 -101219051 + Charlie8 DNA MER1_type 81 225 -2192 253 183 21 65 chr2 149471001 149471094 -101216760 + BSR/Beta Satellite Satellite 66 154 -225 2121 116 10 3 chr2 149471410 149471713 -101216141 - AluSx SINE Alu -5 307 3 795 226 45 0 chr2 149472245 149472400 -101215454 + Tigger3(Golem) DNA MER2_type 2867 3028 -1 279 301 50 87 chr2 149472795 149473014 -101214840 + MIR SINE MIR 2 212 -50 23 0 0 0 chr2 149473961 149473984 -101213870 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 149474603 149474625 -101213229 + AT_rich Low_complexity Low_complexity 1 22 0 338 278 32 24 chr2 149474742 149474868 -101212986 + Charlie8 DNA MER1_type 84 210 -2207 328 375 66 10 chr2 149475064 149475368 -101212486 - L2 LINE L2 -922 2392 2072 585 263 39 26 chr2 149476318 149476474 -101211380 + MIR SINE MIR 6 163 -99 2239 115 30 30 chr2 149476474 149476838 -101211016 + THE1B LTR MaLR 1 364 0 24 32 0 0 chr2 149476895 149476926 -101210928 + AT_rich Low_complexity Low_complexity 1 31 0 430 277 178 20 chr2 149477925 149478127 -101209727 + MIR SINE MIR 4 237 -25 180 111 0 0 chr2 149480253 149480280 -101207574 + (A)n Simple_repeat Simple_repeat 1 27 0 278 279 47 40 chr2 149480624 149480839 -101207015 + MLT1L LTR MaLR 3 276 -339 399 280 57 25 chr2 149480930 149481087 -101206767 + MLT1L LTR MaLR 397 558 -57 813 214 0 18 chr2 149482317 149482485 -101205369 - FRAM SINE Alu -11 165 1 215 380 53 18 chr2 149482679 149482792 -101205062 + MIR SINE MIR 18 134 -128 1491 117 79 53 chr2 149483963 149484228 -101203626 - AluSx SINE Alu -10 302 31 21 57 0 0 chr2 149485203 149485238 -101202616 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr2 149485428 149485465 -101202389 + AT_rich Low_complexity Low_complexity 1 37 0 497 200 0 0 chr2 149485696 149485786 -101202068 + Tigger5 DNA MER2_type 2234 2323 0 1775 122 9 75 chr2 149486470 149486789 -101201065 - AluSx SINE Alu -14 298 1 2149 92 0 3 chr2 149487362 149487667 -101200187 + AluY SINE Alu 1 304 -7 1759 108 8 4 chr2 149488906 149489164 -101198690 + AluSx SINE Alu 40 298 -14 294 299 11 0 chr2 149489832 149489919 -101197935 + L2 LINE L2 2190 2277 -1037 445 289 187 6 chr2 149492054 149492220 -101195634 + MLT1I LTR MaLR 98 293 -116 21 36 0 0 chr2 149492349 149492377 -101195477 + AT_rich Low_complexity Low_complexity 1 28 0 27 49 0 0 chr2 149493196 149493237 -101194617 + AT_rich Low_complexity Low_complexity 1 41 0 377 191 0 0 chr2 149494402 149494470 -101193384 - MLT1H LTR MaLR 0 549 482 383 298 61 0 chr2 149494507 149494621 -101193233 - MER69 DNA AcHobo -761 465 345 1325 338 106 35 chr2 149494629 149495716 -101192138 + HERVL LTR ERVL 3090 4253 -1401 391 335 71 80 chr2 149495776 149496756 -101191098 + HERVL LTR ERVL 4353 5324 -161 25 51 0 0 chr2 149496770 149496809 -101191045 + AT_rich Low_complexity Low_complexity 1 39 0 322 344 60 7 chr2 149497270 149497421 -101190433 + LTR16C LTR ERVL 333 491 0 2091 106 3 47 chr2 149497490 149497812 -101190042 + AluSx SINE Alu 1 308 -4 23 33 0 0 chr2 149502082 149502112 -101185742 + AT_rich Low_complexity Low_complexity 1 30 0 274 185 25 0 chr2 149505348 149505429 -101182425 + (TA)n Simple_repeat Simple_repeat 1 83 0 241 27 0 0 chr2 149507419 149507456 -101180398 - L1MA7 LINE L1 0 6291 6255 26 0 0 0 chr2 149507755 149507781 -101180073 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr2 149507844 149507873 -101179981 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 149508820 149508844 -101179010 + AT_rich Low_complexity Low_complexity 1 24 0 205 327 48 77 chr2 149510384 149510488 -101177366 + L2 LINE L2 3207 3307 -6 551 250 54 24 chr2 149510499 149510667 -101177187 - MIR SINE MIR -81 181 9 908 273 69 52 chr2 149510737 149511184 -101176670 + L2 LINE L2 2859 3313 0 255 293 35 78 chr2 149511373 149511489 -101176365 - L2 LINE L2 -6 3266 3156 748 184 54 0 chr2 149511629 149511776 -101176078 - LTR32 LTR ERVL 0 471 317 1828 190 21 0 chr2 149511812 149512143 -101175711 - LTR32 LTR ERVL -119 352 15 461 344 62 9 chr2 149512820 149513047 -101174807 - MIR SINE MIR -14 248 10 251 339 114 65 chr2 149517694 149517939 -101169915 - MIR SINE MIR -4 258 2 857 208 0 69 chr2 149518925 149519117 -101168737 - AluJo SINE Alu 0 319 144 2107 147 0 0 chr2 149519117 149519429 -101168425 - AluSx SINE Alu 0 312 1 857 208 0 69 chr2 149519429 149519485 -101168369 - AluJo SINE Alu -175 144 86 1484 170 61 22 chr2 149519624 149519936 -101167918 + L1MA7 LINE L1 5939 6262 -29 6306 87 13 5 chr2 149519936 149521060 -101166794 - L1PA11 LINE L1 -1 6173 5024 758 119 40 0 chr2 149521060 149521186 -101166668 + L1PA11 LINE L1 4902 5032 -1114 213 309 60 12 chr2 149522406 149522490 -101165364 + L2 LINE L2 2955 3042 -230 210 288 25 38 chr2 149522638 149522718 -101165136 + L2 LINE L2 3180 3258 -14 229 269 52 45 chr2 149524675 149524809 -101163045 + L1MEd LINE L1 707 841 -5364 613 296 89 47 chr2 149524997 149525193 -101162661 + L1MEd LINE L1 1103 1289 -5107 2070 131 7 0 chr2 149525193 149525491 -101162363 + AluSx SINE Alu 1 300 -12 613 296 89 47 chr2 149525491 149525980 -101161874 + L1MEd LINE L1 1289 1817 -4579 303 134 32 10 chr2 149526274 149526356 -101161498 + L1ME2 LINE L1 5866 5949 -217 25 75 0 0 chr2 149526608 149526661 -101161193 + AT_rich Low_complexity Low_complexity 1 53 0 1662 206 5 30 chr2 149527101 149527469 -101160385 + MLT1A1 LTR MaLR 7 365 0 305 274 145 8 chr2 149527935 149528052 -101159802 - MIR SINE MIR -64 198 66 25 0 0 0 chr2 149528819 149528844 -101159010 + AT_rich Low_complexity Low_complexity 1 25 0 722 265 85 67 chr2 149531019 149531464 -101156390 + L1ME4a LINE L1 5387 5839 -282 22 35 0 0 chr2 149531640 149531669 -101156185 + AT_rich Low_complexity Low_complexity 1 29 0 345 331 40 8 chr2 149531677 149531801 -101156053 + L2 LINE L2 3184 3311 -2 291 266 92 9 chr2 149531833 149531942 -101155912 + L1ME4a LINE L1 5998 6115 -6 207 326 184 0 chr2 149533350 149533491 -101154363 - MIR SINE MIR -95 167 1 2282 52 0 17 chr2 149533496 149533818 -101154036 - AluY SINE Alu 0 317 1 692 244 79 0 chr2 149533927 149534091 -101153763 - MER45A DNA AcHobo 0 178 2 1083 43 0 7 chr2 149534143 149534281 -101153573 - L1PA7 LINE L1 -212 5942 5806 214 366 0 0 chr2 149534682 149534753 -101153101 + L2 LINE L2 3243 3313 0 193 275 0 0 chr2 149535088 149535128 -101152726 - MIR SINE MIR -17 245 206 264 282 111 17 chr2 149535229 149535346 -101152508 - MIR SINE MIR -114 148 21 2015 138 10 0 chr2 149535864 149536169 -101151685 + AluSx SINE Alu 1 308 -4 236 81 0 81 chr2 149536405 149536479 -101151375 + (CAAAAA)n Simple_repeat Simple_repeat 6 73 0 224 233 0 27 chr2 149537852 149537925 -101149929 + GA-rich Low_complexity Low_complexity 1 71 0 272 284 119 15 chr2 149538186 149538320 -101149534 + MIR SINE MIR 113 260 -2 1239 181 77 37 chr2 149538627 149538926 -101148928 + AluJo SINE Alu 1 311 -1 24 0 0 0 chr2 149538970 149538994 -101148860 + AT_rich Low_complexity Low_complexity 1 24 0 483 305 72 51 chr2 149539124 149539703 -101148151 + L1MC/D LINE L1 5187 5784 -390 2297 136 6 0 chr2 149539703 149540048 -101147806 - MER7A DNA MER2_type 0 346 2 483 305 72 51 chr2 149540048 149540095 -101147759 + L1MC/D LINE L1 5784 5829 -345 8100 46 0 1 chr2 149540244 149541262 -101146592 - L1P LINE L1 -3336 2810 1794 327 309 21 0 chr2 149541523 149541617 -101146237 + MER5A DNA MER1_type 10 105 -84 557 249 43 22 chr2 149542292 149542477 -101145377 - MER5A DNA MER1_type 0 189 1 1820 87 0 0 chr2 149542876 149543105 -101144749 + AluSg SINE Alu 5 233 -77 816 199 31 110 chr2 149543205 149543522 -101144332 + Zaphod DNA AcHobo 369 660 -3371 1948 224 87 32 chr2 149543525 149544235 -101143619 + Zaphod DNA AcHobo 3283 4031 0 353 205 99 37 chr2 149544245 149544406 -101143448 - MER69 DNA AcHobo -110 2416 2246 873 257 85 7 chr2 149544518 149544825 -101143029 - L1M4 LINE L1 -976 5170 4840 264 111 0 0 chr2 149544826 149544871 -101142983 + (TG)n Simple_repeat Simple_repeat 2 46 0 1848 181 9 20 chr2 149544888 149545230 -101142624 + MLT1A1 LTR MaLR 2 339 -26 2244 116 6 0 chr2 149545282 149545593 -101142261 - AluSq SINE Alu 0 313 1 195 42 0 0 chr2 149545715 149545739 -101142115 + (TC)n Simple_repeat Simple_repeat 2 25 0 * 243 0 0 0 chr2 149545738 149545765 -101142089 + (TG)n Simple_repeat Simple_repeat 2 28 0 293 318 40 0 chr2 149545773 149545899 -101141955 - MIR SINE MIR -81 181 51 432 290 30 30 chr2 149546205 149546336 -101141518 - MIR SINE MIR -105 157 27 443 250 76 76 chr2 149547605 149547829 -101140025 + L2 LINE L2 3090 3313 0 32 0 0 0 chr2 149548351 149548383 -101139471 + AT_rich Low_complexity Low_complexity 1 32 0 201 74 0 0 chr2 149549202 149549229 -101138625 + (A)n Simple_repeat Simple_repeat 1 27 0 21 36 0 0 chr2 149550171 149550199 -101137655 + AT_rich Low_complexity Low_complexity 1 28 0 541 258 0 8 chr2 149552097 149552229 -101135625 + FLAM_A SINE Alu 2 132 -1 21 36 0 0 chr2 149552532 149552560 -101135294 + AT_rich Low_complexity Low_complexity 1 28 0 2312 102 3 0 chr2 149553965 149554269 -101133585 - AluSp SINE Alu -8 305 1 184 319 103 35 chr2 149555404 149555520 -101132334 + L2 LINE L2 1850 1973 -1341 21 0 0 0 chr2 149556222 149556243 -101131611 + AT_rich Low_complexity Low_complexity 1 21 0 364 362 124 28 chr2 149557627 149558106 -101129748 + L2 LINE L2 2776 3299 -14 369 43 0 0 chr2 149559976 149560023 -101127831 + (TG)n Simple_repeat Simple_repeat 2 48 0 53 49 0 0 chr2 149560421 149560502 -101127352 + AT_rich Low_complexity Low_complexity 1 81 0 299 370 47 91 chr2 149560769 149561023 -101126831 - L2 LINE L2 -19 3253 3011 750 251 78 0 chr2 149561971 149562190 -101125664 - L2 LINE L2 -5 3308 3073 1361 140 8 98 chr2 149562255 149562520 -101125334 - AluSx SINE Alu -71 241 1 2482 294 107 34 chr2 149562558 149562882 -101124972 - L2 LINE L2 -244 3069 2770 1462 209 73 12 chr2 149562882 149563222 -101124632 + MLT1A1 LTR MaLR 5 365 0 2482 294 107 34 chr2 149563222 149563877 -101123977 - L2 LINE L2 -543 2770 1970 577 181 17 17 chr2 149563877 149563993 -101123861 - L1PB4 LINE L1 -14 6142 6027 2482 294 107 34 chr2 149563993 149564265 -101123589 - L2 LINE L2 -1343 1970 1719 1293 286 96 36 chr2 149564758 149565281 -101122573 + MLT1F1 LTR MaLR 25 567 0 1074 255 64 36 chr2 149565535 149565892 -101121962 + MLT1G1 LTR MaLR 20 386 -209 572 150 50 0 chr2 149565902 149566002 -101121852 - L1MA3 LINE L1 -297 6008 5904 655 200 7 0 chr2 149566002 149566137 -101121717 + L1MA3 LINE L1 6170 6305 0 1101 142 25 83 chr2 149566162 149566402 -101121452 + AluJo SINE Alu 85 310 -2 541 306 60 11 chr2 149566402 149566585 -101121269 + MLT1G1 LTR MaLR 376 567 -23 246 62 0 0 chr2 149566931 149566963 -101120891 + (GA)n Simple_repeat Simple_repeat 1 32 0 773 217 156 34 chr2 149567749 149568044 -101119810 + MLT1J2 LTR MaLR 22 352 -98 316 231 82 16 chr2 149568112 149568222 -101119632 + MLT1J1 LTR MaLR 334 441 -5 289 196 168 28 chr2 149568984 149569127 -101118727 - MER113 DNA MER1_type? -355 166 4 534 311 56 0 chr2 149569254 149569450 -101118404 - MIR SINE MIR -8 254 48 267 31 0 0 chr2 149569501 149569533 -101118321 + (TG)n Simple_repeat Simple_repeat 2 33 0 209 355 65 0 chr2 149575955 149576017 -101111837 + L2 LINE L2 3168 3233 -39 2067 68 0 0 chr2 149576431 149576681 -101111173 + AluSc SINE Alu 1 250 -59 348 307 94 65 chr2 149576833 149577292 -101110562 + HAL1 LINE L1 370 841 -1666 185 274 253 21 chr2 149577348 149577443 -101110411 - L2 LINE L2 -4 3309 3193 214 207 0 73 chr2 149577564 149577646 -101110208 + A-rich Low_complexity Low_complexity 5 80 0 1727 102 4 0 chr2 149577740 149577966 -101109888 + AluSx SINE Alu 3 229 -83 1021 274 104 65 chr2 149577986 149578577 -101109277 + HAL1 LINE L1 1170 1737 -770 1964 105 4 19 chr2 149578577 149578844 -101109010 + AluSg SINE Alu 1 263 -47 413 36 18 0 chr2 149578844 149578899 -101108955 + (TAA)n Simple_repeat Simple_repeat 2 57 0 1021 274 104 65 chr2 149578899 149579593 -101108261 + HAL1 LINE L1 1736 2506 -1 662 237 54 21 chr2 149579856 149580042 -101107812 + MIR SINE MIR 71 262 0 22 0 0 0 chr2 149581673 149581695 -101106159 + AT_rich Low_complexity Low_complexity 1 22 0 209 295 27 54 chr2 149582359 149582471 -101105383 - MIR SINE MIR -41 221 113 1159 208 40 40 chr2 149582530 149582804 -101105050 + AluJo SINE Alu 13 286 -26 183 80 0 0 chr2 149583763 149583788 -101104066 + (A)n Simple_repeat Simple_repeat 1 25 0 246 191 0 0 chr2 149585053 149585095 -101102759 + Tigger1 DNA MER2_type 1 42 -2376 9870 126 28 10 chr2 149585096 149585262 -101102592 + Tigger1 DNA MER2_type 306 468 -1950 1634 127 7 76 chr2 149585262 149585553 -101102301 + AluSx SINE Alu 26 296 -16 9870 126 28 10 chr2 149585553 149586528 -101101326 + Tigger1 DNA MER2_type 468 1424 -994 2387 68 3 13 chr2 149586528 149586835 -101101019 + AluY SINE Alu 1 304 -7 9870 126 28 10 chr2 149586835 149587596 -101100258 + Tigger1 DNA MER2_type 1424 2250 -168 1709 171 10 24 chr2 149587596 149587894 -101099960 - AluJb SINE Alu -18 294 1 9870 126 28 10 chr2 149587894 149588067 -101099787 + Tigger1 DNA MER2_type 2250 2418 0 250 267 100 22 chr2 149588327 149588417 -101099437 - MER5B DNA MER1_type -81 97 1 807 143 8 0 chr2 149588741 149588867 -101098987 + FLAM_C SINE Alu 1 127 -16 24 0 0 0 chr2 149588871 149588895 -101098959 + AT_rich Low_complexity Low_complexity 1 24 0 205 379 15 0 chr2 149589242 149589308 -101098546 - L2 LINE L2 -88 3184 3118 1860 195 76 10 chr2 149589422 149589909 -101097945 - Charlie1b DNA MER1_type -4 519 1 850 314 134 28 chr2 149590396 149590791 -101097063 + MLT1G1 LTR MaLR 97 533 -62 21 0 0 0 chr2 149591047 149591068 -101096786 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 149593050 149593071 -101094783 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 149594182 149594205 -101093649 + AT_rich Low_complexity Low_complexity 1 23 0 872 319 108 45 chr2 149594490 149595215 -101092639 + L2 LINE L2 2086 2855 -459 463 261 33 95 chr2 149595273 149595514 -101092340 + MLT1J LTR MaLR 93 318 -193 258 295 36 36 chr2 149595482 149595594 -101092260 + MLT1L LTR MaLR 369 480 -135 * 716 294 57 35 chr2 149598126 149598442 -101089412 - MER102b DNA MER1_type -6 335 13 1512 170 3 53 chr2 149599025 149599325 -101088529 + AluJo SINE Alu 3 287 -25 284 325 100 0 chr2 149600973 149601093 -101086761 + L2 LINE L2 3182 3313 0 903 70 14 14 chr2 149601431 149601573 -101086281 + (TTTC)n Simple_repeat Simple_repeat 3 144 0 257 198 12 0 chr2 149604051 149604137 -101083717 + (TA)n Simple_repeat Simple_repeat 2 88 0 241 312 147 29 chr2 149613246 149613416 -101074438 - MIR SINE MIR -16 246 57 526 245 39 0 chr2 149613432 149613587 -101074267 + L1ME2 LINE L1 5739 5899 -265 756 152 0 0 chr2 149613587 149613719 -101074135 + GA-rich Low_complexity Low_complexity 3 134 0 526 251 28 16 chr2 149613721 149613949 -101073905 + L1MA10 LINE L1 5902 6293 -41 449 204 23 15 chr2 149613993 149614125 -101073729 + HsTC2 DNA Tc2 1647 1779 -119 197 320 0 0 chr2 149614907 149614957 -101072897 - L2 LINE L2 -20 3293 3244 200 194 0 0 chr2 149620863 149620899 -101066955 + (TG)n Simple_repeat Simple_repeat 1 36 0 785 241 60 28 chr2 149620901 149621150 -101066704 - L1ME3A LINE L1 -56 6114 5858 893 261 25 25 chr2 149621166 149621565 -101066289 - L1ME3A LINE L1 -785 5361 4963 22 0 0 0 chr2 149621595 149621617 -101066237 + AT_rich Low_complexity Low_complexity 1 22 0 360 0 0 0 chr2 149621617 149621657 -101066197 + (CA)n Simple_repeat Simple_repeat 2 41 0 209 285 49 65 chr2 149622428 149622551 -101065303 + MER5A DNA MER1_type 51 171 -18 228 305 0 0 chr2 149622779 149622838 -101065016 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 4393 95 29 2 chr2 149623103 149623733 -101064121 + L1PA13 LINE L1 5517 6163 0 200 277 0 0 chr2 149624749 149624796 -101063058 + (TG)n Simple_repeat Simple_repeat 2 48 0 547 296 42 67 chr2 149625278 149625609 -101062245 + MER102b DNA MER1_type 2 324 -17 193 271 54 93 chr2 149625989 149626118 -101061736 + L2 LINE L2 3099 3222 -50 222 217 0 0 chr2 149626786 149626832 -101061022 + A-rich Low_complexity Low_complexity 2 47 0 508 265 107 51 chr2 149627470 149627704 -101060150 - MIR SINE MIR -10 252 6 221 369 102 21 chr2 149628289 149628476 -101059378 - L2 LINE L2 -942 2372 2171 1167 166 87 10 chr2 149628506 149628795 -101059059 - MER33 DNA MER1_type -8 316 6 397 296 95 29 chr2 149629114 149629357 -101058497 + MIR SINE MIR 4 262 0 453 279 54 25 chr2 149630151 149630355 -101057499 - L2 LINE L2 0 3313 3104 314 312 225 9 chr2 149630357 149630588 -101057266 - L2 LINE L2 -499 2815 2535 1528 300 41 55 chr2 149631288 149631922 -101055932 - L2 LINE L2 -805 2509 1885 2361 75 7 10 chr2 149632562 149632869 -101054985 + AluY SINE Alu 1 306 -5 511 291 98 25 chr2 149633004 149633287 -101054567 + L1MC4a LINE L1 5354 5609 -512 823 19 19 0 chr2 149633287 149633392 -101054462 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 511 291 98 25 chr2 149633392 149633620 -101054234 + L1MC4a LINE L1 5609 5819 -302 203 229 14 29 chr2 149633620 149633690 -101054164 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 827 325 91 22 chr2 149634766 149635270 -101052584 + MLT1K LTR MaLR 41 579 -9 25 31 0 0 chr2 149638871 149638903 -101048951 + AT_rich Low_complexity Low_complexity 1 32 0 311 366 27 18 chr2 149639459 149639571 -101048283 + MIR SINE MIR 32 144 -64 2229 99 10 0 chr2 149639792 149640095 -101047759 - AluSc SINE Alu -3 306 1 2319 75 6 34 chr2 149640329 149640650 -101047204 - AluSx SINE Alu 0 312 1 794 286 86 0 chr2 149640742 149640976 -101046878 - MIR SINE MIR -2 260 7 306 296 50 29 chr2 149641152 149641392 -101046462 + L1MC/D LINE L1 4474 4718 -1428 415 221 98 69 chr2 149642005 149642187 -101045667 + L1MC/D LINE L1 5457 5649 -642 201 245 41 0 chr2 149642549 149642598 -101045256 - MIR SINE MIR -13 249 199 1713 202 22 12 chr2 149642598 149642963 -101044891 + MLT1A1 LTR MaLR 4 365 0 2897 296 111 45 chr2 149642970 149644737 -101043117 - L2 LINE L2 -111 3202 1313 213 319 14 0 chr2 149645063 149645132 -101042722 - L2 LINE L2 0 3272 3203 22 70 0 0 chr2 149645176 149645219 -101042635 + AT_rich Low_complexity Low_complexity 1 43 0 438 310 169 27 chr2 149645237 149645569 -101042285 - L2 LINE L2 -1484 1830 1452 * 450 309 68 26 chr2 149645568 149645759 -101042095 - L2 LINE L2 -271 3042 2844 238 340 118 37 chr2 149646212 149646644 -101041210 + L1MEd LINE L1 3 469 -5650 3576 142 40 11 chr2 149646739 149647689 -101040165 + L1PB1 LINE L1 4814 5791 -360 261 57 0 0 chr2 149647689 149647724 -101040130 + (CA)n Simple_repeat Simple_repeat 2 36 0 3576 142 40 11 chr2 149647724 149647738 -101040116 + L1PB1 LINE L1 5791 5803 -348 310 127 16 16 chr2 149647739 149647802 -101040052 + (TA)n Simple_repeat Simple_repeat 1 63 0 2439 107 14 6 chr2 149647802 149648168 -101039686 + L1PB1 LINE L1 5782 6150 -1 315 295 85 23 chr2 149648569 149648827 -101039027 + L1MEd LINE L1 940 1213 -4906 308 226 75 32 chr2 149649221 149649314 -101038540 - MER63 DNA MER1_type -113 723 1 7391 158 41 9 chr2 149649396 149649929 -101037925 - L1MA8 LINE L1 -3 6288 5774 1740 164 143 8 chr2 149649929 149650306 -101037548 + MSTA LTR MaLR 1 428 0 7391 158 41 9 chr2 149650306 149651984 -101035870 - L1MA8 LINE L1 -517 5774 3908 1903 248 34 20 chr2 149652654 149653159 -101034695 + LTR40a LTR ERVL 1 512 -7 210 118 0 0 chr2 149654278 149654312 -101033542 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 575 324 89 41 chr2 149654468 149654907 -101032947 + L2 LINE L2 2849 3308 -5 400 295 132 18 chr2 149655085 149655312 -101032542 - MLT1J LTR MaLR 0 511 259 309 118 0 0 chr2 149655729 149655780 -101032074 + (TA)n Simple_repeat Simple_repeat 1 51 0 547 330 35 52 chr2 149657541 149657771 -101030083 + MER115 DNA AcHobo 23 248 -445 996 279 21 42 chr2 149657833 149658170 -101029684 + MER115 DNA AcHobo 359 688 -5 35 71 0 0 chr2 149659012 149659082 -101028772 + AT_rich Low_complexity Low_complexity 1 70 0 21 0 0 0 chr2 149660688 149660709 -101027145 + AT_rich Low_complexity Low_complexity 1 21 0 187 278 11 100 chr2 149660978 149661068 -101026786 - L2 LINE L2 -12 3260 3179 333 335 132 39 chr2 149661179 149661814 -101026040 - L2 LINE L2 -225 3047 2349 190 312 64 64 chr2 149662195 149662368 -101025486 + MIR SINE MIR 61 233 -29 286 56 481 0 chr2 149662982 149663036 -101024818 + MADE1 DNA Mariner 1 80 0 2231 125 0 0 chr2 149663738 149664049 -101023805 + AluSx SINE Alu 1 311 -1 21 36 0 0 chr2 149664990 149665018 -101022836 + AT_rich Low_complexity Low_complexity 1 28 0 195 204 0 0 chr2 149665237 149665281 -101022573 + (TA)n Simple_repeat Simple_repeat 1 44 0 558 208 115 38 chr2 149665779 149665962 -101021892 + LTR16A LTR ERVL 235 431 -19 2122 116 3 0 chr2 149668154 149668448 -101019406 - AluSp SINE Alu 0 313 19 1244 169 0 40 chr2 149677493 149677765 -101010089 + pTR5 LTR ERV1 743 1003 -1435 2331 104 40 21 chr2 149677787 149678291 -101009563 + pTR5 LTR ERV1 1197 2021 -417 334 214 31 20 chr2 149678295 149678393 -101009461 + LTR30 LTR ERV1 544 642 -80 1589 101 13 13 chr2 149678396 149678634 -101009220 + pTR5 LTR ERV1 172 409 -2029 1877 202 61 47 chr2 149678907 149679398 -101008456 + MLT1D LTR MaLR 5 502 -3 21 57 0 0 chr2 149680003 149680038 -101007816 + AT_rich Low_complexity Low_complexity 1 35 0 13397 143 49 7 chr2 149680292 149680851 -101007003 - Tigger1 DNA MER2_type -1 2417 1883 224 54 54 0 chr2 149680851 149680888 -101006966 + A-rich Low_complexity Low_complexity 2 40 0 13397 143 49 7 chr2 149680888 149682647 -101005207 - Tigger1 DNA MER2_type -535 1883 1 203 224 0 20 chr2 149683098 149683147 -101004707 + MIR SINE MIR 103 150 -58 186 43 0 0 chr2 149683692 149683715 -101004139 + (A)n Simple_repeat Simple_repeat 1 23 0 180 0 0 0 chr2 149683883 149683903 -101003951 + (TA)n Simple_repeat Simple_repeat 1 20 0 1653 165 4 0 chr2 149683929 149684195 -101003659 - AluJb SINE Alu -13 299 33 940 283 88 50 chr2 149684351 149684913 -101002941 + MLT1H1 LTR MaLR 16 555 0 2239 153 47 0 chr2 149685179 149685564 -101002290 - MER57A LTR ERV1 0 403 1 549 242 65 0 chr2 149685671 149685795 -101002059 - MER5A DNA MER1_type -56 133 2 234 0 0 0 chr2 149685873 149685899 -101001955 + (T)n Simple_repeat Simple_repeat 1 26 0 376 248 30 20 chr2 149686095 149686196 -101001658 + MIR SINE MIR 161 262 0 1045 232 27 9 chr2 149686518 149686742 -101001112 - MIR SINE MIR 0 262 35 353 212 140 84 chr2 149686769 149686948 -101000906 - MER46C DNA MER2_type -44 294 106 1536 298 80 4 chr2 149687208 149687719 -101000135 - MLT1H1 LTR MaLR 0 555 6 21 0 0 0 chr2 149687818 149687839 -101000015 + AT_rich Low_complexity Low_complexity 1 21 0 288 0 0 0 chr2 149688128 149688160 -100999694 + (CA)n Simple_repeat Simple_repeat 2 33 0 448 299 16 84 chr2 149688310 149688554 -100999300 - MIR SINE MIR -8 254 26 946 227 66 0 chr2 149688659 149688915 -100998939 + MER58B DNA MER1_type 69 341 0 671 249 55 111 chr2 149689480 149689519 -100998335 - MER58B DNA MER1_type -2079 341 301 2235 119 0 0 chr2 149689519 149689822 -100998032 + AluSx SINE Alu 1 303 -9 671 249 55 111 chr2 149689822 149690042 -100997812 - MER58B DNA MER1_type -2119 301 105 1738 177 3 10 chr2 149690042 149690353 -100997501 + AluJo SINE Alu 4 312 0 671 249 55 111 chr2 149690353 149690453 -100997401 - MER58B DNA MER1_type -2315 105 1 212 318 0 68 chr2 149690529 149690617 -100997237 + L2 LINE L2 2896 2977 -336 11187 112 13 2 chr2 149690660 149691853 -100996001 - THE1B-int LTR MaLR 0 1580 364 2302 99 0 16 chr2 149691853 149692167 -100995687 + AluY SINE Alu 1 309 -2 11187 112 13 2 chr2 149692167 149692536 -100995318 - THE1B-int LTR MaLR -1216 364 1 2174 128 33 41 chr2 149692536 149692903 -100994951 - THE1B LTR MaLR 0 364 1 458 111 111 0 chr2 149692905 149692977 -100994877 + MSTB LTR MaLR 347 426 0 244 277 0 59 chr2 149693019 149693120 -100994734 - MLT1H1-int LTR MaLR -248 1123 1029 1428 306 45 30 chr2 149693302 149693874 -100993980 - MLT1E LTR MaLR -3 590 10 34 0 0 0 chr2 149695629 149695663 -100992191 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 149696199 149696221 -100991633 + AT_rich Low_complexity Low_complexity 1 22 0 727 242 41 113 chr2 149696347 149696710 -100991144 - MLT1F LTR MaLR -197 345 9 185 264 92 46 chr2 149696715 149696802 -100991052 - L2 LINE L2 -626 2688 2598 869 129 0 0 chr2 149696938 149697099 -100990755 - AluSg/x SINE Alu 0 316 156 1886 200 106 15 chr2 149698191 149698672 -100989182 + MER63C DNA MER1_type 255 779 -151 3856 270 93 39 chr2 149698705 149698860 -100988994 - L1MD2 LINE L1 -49 6546 6401 288 0 0 0 chr2 149698860 149698892 -100988962 + (TG)n Simple_repeat Simple_repeat 2 33 0 3856 270 93 39 chr2 149698892 149702419 -100985435 - L1MD2 LINE L1 -194 6401 2633 346 294 5 26 chr2 149702450 149702644 -100985210 - L1MD2 LINE L1 -4213 2171 1982 315 49 0 0 chr2 149703454 149703495 -100984359 + (CA)n Simple_repeat Simple_repeat 1 41 0 419 338 14 0 chr2 149703730 149703878 -100983976 + MIR SINE MIR 100 249 -13 23 0 0 0 chr2 149703941 149703964 -100983890 + AT_rich Low_complexity Low_complexity 1 23 0 392 355 65 0 chr2 149705687 149705887 -100981967 - MIR SINE MIR -32 230 18 697 232 61 76 chr2 149705957 149706285 -100981569 - HAL1 LINE L1 -95 2412 2090 1187 289 93 61 chr2 149706647 149707616 -100980238 - HAL1 LINE L1 -1352 1155 156 2052 144 41 24 chr2 149709298 149709667 -100978187 + THE1C LTR MaLR 1 375 0 9698 131 45 3 chr2 149709667 149711183 -100976671 + THE1C-int LTR MaLR 1 1580 0 1960 155 53 14 chr2 149711183 149711544 -100976310 + THE1C LTR MaLR 1 375 0 303 197 190 58 chr2 149711659 149711796 -100976058 - L1MC5 LINE L1 -25 7936 7782 470 17 0 17 chr2 149711797 149711857 -100975997 + (TTCC)n Simple_repeat Simple_repeat 1 59 0 1842 227 25 39 chr2 149711857 149712369 -100975485 + MLT1D LTR MaLR 1 505 0 349 257 121 59 chr2 149712413 149712853 -100975001 - L1MC4 LINE L1 -185 7776 7310 29 47 0 0 chr2 149713302 149713345 -100974509 + AT_rich Low_complexity Low_complexity 1 43 0 1146 183 81 59 chr2 149713401 149713674 -100974180 - MER21B LTR ERV1 -17 846 568 2006 147 76 9 chr2 149713674 149714015 -100973839 - THE1B LTR MaLR 0 364 1 10646 88 17 62 chr2 149714015 149715670 -100972184 - THE1B-int LTR MaLR 0 1580 1 1518 159 87 11 chr2 149715670 149715946 -100971908 - THE1B LTR MaLR 0 364 68 597 309 28 39 chr2 149716001 149716393 -100971461 + L1MC5 LINE L1 6563 6874 -934 21 0 0 0 chr2 149716435 149716456 -100971398 + AT_rich Low_complexity Low_complexity 1 21 0 2658 64 20 17 chr2 149716948 149717306 -100970548 + L1PA8A LINE L1 5761 6119 -12 292 174 65 19 chr2 149717330 149717485 -100970369 + (TA)n Simple_repeat Simple_repeat 2 163 0 361 300 118 32 chr2 149717496 149717716 -100970138 + L1MEd LINE L1 605 843 -5362 405 255 49 49 chr2 149717780 149717984 -100969870 - LTR16A1 LTR ERVL 0 457 254 251 291 99 23 chr2 149718291 149718463 -100969391 + L1MEd LINE L1 1128 1312 -4893 1349 49 0 0 chr2 149718566 149718729 -100969125 - L1PA8A LINE L1 -563 5568 5406 303 307 24 0 chr2 149718728 149718855 -100968999 + L1MEd LINE L1 1514 1643 -4753 * 281 68 23 0 chr2 149718996 149719040 -100968814 + (GA)n Simple_repeat Simple_repeat 1 45 0 1976 124 62 0 chr2 149719348 149719638 -100968216 + AluSx SINE Alu 1 308 -4 1326 204 40 30 chr2 149719643 149719947 -100967907 + AluJo SINE Alu 3 309 -3 207 100 0 0 chr2 149719973 149720003 -100967851 + (GGAA)n Simple_repeat Simple_repeat 3 32 0 1463 186 10 48 chr2 149720116 149720427 -100967427 + AluJo SINE Alu 1 299 -3 500 281 53 73 chr2 149720502 149720900 -100966954 + L1M4 LINE L1 4456 4845 -1301 22 0 0 0 chr2 149720967 149720989 -100966865 + AT_rich Low_complexity Low_complexity 1 22 0 239 183 134 0 chr2 149721106 149721188 -100966666 + L1ME LINE L1 5793 5885 -285 225 377 9 66 chr2 149721565 149721671 -100966183 + L2 LINE L2 3104 3203 -69 639 212 0 53 chr2 149721692 149721824 -100966030 + FLAM_A SINE Alu 1 125 -8 7109 102 9 0 chr2 149721824 149723640 -100964214 + L1PA7 LINE L1 4327 6140 -14 228 85 17 34 chr2 149723640 149723699 -100964155 + (TA)n Simple_repeat Simple_repeat 2 59 0 301 215 15 0 chr2 149723709 149723774 -100964080 - L1MC4 LINE L1 -1341 6701 6636 192 329 53 0 chr2 149723877 149723953 -100963901 + MIR SINE MIR 183 262 0 256 283 111 0 chr2 149724406 149724505 -100963349 - MER112 DNA MER1_type -17 243 134 336 178 69 69 chr2 149724618 149724719 -100963135 - HsTC2 DNA Tc2 -1795 103 3 327 151 0 0 chr2 149724822 149724875 -100962979 - L1MC4 LINE L1 -1339 6703 6651 252 380 29 10 chr2 149725913 149726121 -100961733 - MIR SINE MIR -14 248 37 4827 73 51 0 chr2 149727301 149727929 -100959925 + PABL_A LTR ERV1 1 660 0 21 36 0 0 chr2 149729703 149729731 -100958123 + AT_rich Low_complexity Low_complexity 1 28 0 241 347 28 14 chr2 149730146 149730290 -100957564 - MIR3 SINE MIR -30 178 33 1302 204 9 63 chr2 149730673 149730718 -100957136 + AluJo SINE Alu 1 47 -265 4616 66 7 0 chr2 149730718 149731305 -100956549 + LTR10C LTR ERV1 1 591 0 1302 204 9 63 chr2 149731305 149731398 -100956456 + AluJo SINE Alu 47 143 -169 1376 202 62 7 chr2 149731398 149731690 -100956164 + AluJb SINE Alu 1 308 -4 1302 204 9 63 chr2 149731690 149731868 -100955986 + AluJo SINE Alu 143 301 -11 634 162 0 10 chr2 149732217 149732316 -100955538 + AluJo SINE Alu 90 187 -125 195 357 82 0 chr2 149733032 149733130 -100954724 - L3 LINE CR1 -1 1576 1471 255 231 49 14 chr2 149733210 149733353 -100954501 + (TA)n Simple_repeat Simple_repeat 2 149 0 26 0 0 0 chr2 149733461 149733487 -100954367 + AT_rich Low_complexity Low_complexity 1 26 0 206 308 0 15 chr2 149733704 149733769 -100954085 + L2 LINE L2 3250 3313 0 194 245 0 19 chr2 149733810 149733863 -100953991 - MIR SINE MIR -141 121 70 267 241 0 0 chr2 149733898 149733952 -100953902 - L2 LINE L2 -16 3256 3203 336 24 0 0 chr2 149734705 149734746 -100953108 + (CA)n Simple_repeat Simple_repeat 2 42 0 1632 162 53 56 chr2 149734970 149735151 -100952703 + THE1C LTR MaLR 1 181 -194 2458 71 0 3 chr2 149735151 149735462 -100952392 - AluY SINE Alu -1 310 1 1632 162 53 56 chr2 149735462 149735483 -100952371 + THE1C LTR MaLR 181 201 -174 204 40 0 0 chr2 149735483 149735508 -100952346 + (TC)n Simple_repeat Simple_repeat 1 25 0 1632 162 53 56 chr2 149735508 149735680 -100952174 + THE1C LTR MaLR 201 375 0 1060 230 5 5 chr2 149735686 149735717 -100952137 + MER58A DNA MER1_type 16 46 -2374 1855 161 3 3 chr2 149735717 149736015 -100951839 - AluJb SINE Alu -14 298 1 1060 230 5 5 chr2 149736015 149736192 -100951662 + MER58A DNA MER1_type 45 224 0 215 339 59 17 chr2 149736192 149736310 -100951544 - MIR3 SINE MIR -48 160 38 2143 163 3 6 chr2 149736360 149736723 -100951131 + MER47A DNA MER2_type 4 365 -1 972 177 8 89 chr2 149736744 149736981 -100950873 + AluJo SINE Alu 82 299 -13 284 324 55 41 chr2 149737245 149737464 -100950390 - MIR SINE MIR -19 243 22 1913 157 3 0 chr2 149737866 149738152 -100949702 - AluSx SINE Alu -23 289 3 22 0 0 0 chr2 149738279 149738301 -100949553 + AT_rich Low_complexity Low_complexity 1 22 0 21 89 0 0 chr2 149738380 149738436 -100949418 + AT_rich Low_complexity Low_complexity 1 56 0 298 0 0 0 chr2 149738576 149738609 -100949245 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1190 116 0 0 chr2 149738609 149738764 -100949090 - AluSp SINE Alu -1 315 129 217 108 31 77 chr2 149738882 149738947 -100948907 + A-rich Low_complexity Low_complexity 6 67 0 31 0 0 0 chr2 149739059 149739090 -100948764 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr2 149739099 149739124 -100948730 + GC_rich Low_complexity Low_complexity 1 25 0 5560 263 6 6 chr2 149740655 149742301 -100945553 - L1 LINE L1 -1605 4541 2896 2418 276 9 6 chr2 149742402 149743418 -100944436 + L1MA9 LINE L1 4913 5931 -381 2301 90 7 0 chr2 149747731 149748032 -100939822 + AluSg SINE Alu 1 303 -7 546 251 103 40 chr2 149749123 149749386 -100938468 + LTR1 LTR ERV1 1 425 -555 386 195 50 206 chr2 149749419 149749701 -100938153 + LTR1B LTR ERV1 508 745 -81 601 207 8 48 chr2 149749744 149749906 -100937948 + LTR28 LTR ERV1 667 1020 0 200 216 0 20 chr2 149751200 149751251 -100936603 + A-rich Low_complexity Low_complexity 5 54 0 633 293 115 39 chr2 149751351 149752019 -100935835 + HAL1b LINE L1 96 814 -534 567 276 65 56 chr2 149752892 149753324 -100934530 + L1MC/D LINE L1 2736 3171 -2975 21 0 0 0 chr2 149753767 149753788 -100934066 + AT_rich Low_complexity Low_complexity 1 21 0 265 275 105 20 chr2 149753822 149754022 -100933832 + L1P LINE L1 3718 3934 -2212 326 256 44 44 chr2 149754378 149754444 -100933410 + L1MC/D LINE L1 4533 4598 -1548 2698 144 17 2 chr2 149754444 149754866 -100932988 + MSTA LTR MaLR 1 428 0 326 256 44 44 chr2 149754866 149754936 -100932918 + L1MC/D LINE L1 4597 4669 -1477 1095 293 35 14 chr2 149755104 149755568 -100932286 + L1MC/D LINE L1 5269 5741 -672 * 12283 185 30 20 chr2 149755567 149758329 -100929525 + L1MA8 LINE L1 2570 5358 -788 4912 126 25 45 chr2 149758360 149758534 -100929320 + L1PA16 LINE L1 5311 5487 -679 2262 110 13 0 chr2 149758534 149758843 -100929011 + AluSq SINE Alu 1 313 0 4912 126 25 45 chr2 149758843 149759541 -100928313 + L1PA16 LINE L1 5487 6166 0 1280 211 11 11 chr2 149761119 149761389 -100926465 + AluJo SINE Alu 39 308 -4 2034 219 12 85 chr2 149762758 149762952 -100924902 + L1MA8 LINE L1 5591 5798 -493 189 0 0 0 chr2 149762952 149762973 -100924881 + (CA)n Simple_repeat Simple_repeat 2 22 0 2034 219 12 85 chr2 149762973 149763112 -100924742 + L1MA8 LINE L1 5798 5946 -345 1033 192 0 11 chr2 149763112 149763289 -100924565 + FAM SINE Alu 1 175 0 2034 219 12 85 chr2 149763289 149763681 -100924173 + L1MA8 LINE L1 5946 6264 -27 2180 122 0 3 chr2 149763767 149764070 -100923784 - AluSx SINE Alu -8 304 3 42877 31 21 1 chr2 149764195 149770226 -100917628 - L1PA2 LINE L1 0 6155 1 596 66 0 0 chr2 149770485 149770561 -100917293 + MADE1 DNA Mariner 5 80 0 204 298 96 19 chr2 149770847 149770951 -100916903 + L2 LINE L2 3197 3308 -5 1942 129 35 0 chr2 149771553 149771840 -100916014 - AluSx SINE Alu -15 297 1 212 0 36 0 chr2 149772657 149772685 -100915169 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1830 120 3 63 chr2 149772687 149772986 -100914868 - AluSx SINE Alu -31 281 1 418 264 41 8 chr2 149774423 149774544 -100913310 - MIR SINE MIR -62 200 76 295 198 198 23 chr2 149775036 149775122 -100912732 + MLT1E LTR MaLR 1 101 -492 2202 197 18 9 chr2 149775372 149775828 -100912026 + MER65C LTR ERV1 2 461 0 23 33 0 0 chr2 149776628 149776658 -100911196 + AT_rich Low_complexity Low_complexity 1 30 0 382 341 79 23 chr2 149776860 149777074 -100910780 - MIR SINE MIR -4 258 33 1890 157 3 7 chr2 149777230 149777535 -100910319 - AluSc SINE Alu -3 306 3 27 0 0 0 chr2 149777599 149777626 -100910228 + AT_rich Low_complexity Low_complexity 1 27 0 1374 148 5 10 chr2 149777765 149777974 -100909880 - AluSc SINE Alu -99 210 3 227 311 38 47 chr2 149779804 149779910 -100907944 - MIR3 SINE MIR -7 201 97 216 329 13 0 chr2 149779939 149780015 -100907839 + L2 LINE L2 2745 2821 -493 267 176 29 13 chr2 149780207 149780314 -100907540 + FLAM SINE Alu 82 123 -10 31 82 0 0 chr2 149784213 149784286 -100903568 + AT_rich Low_complexity Low_complexity 1 73 0 377 173 18 73 chr2 149788099 149788209 -100899645 - LTR37B LTR ERV1 -8 460 357 260 213 16 0 chr2 149788330 149788391 -100899463 - LTR37B LTR ERV1 -209 259 198 323 290 14 55 chr2 149788559 149788591 -100899263 - MIR SINE MIR -4 258 226 2141 124 140 8 chr2 149788591 149788969 -100898885 - MSTA LTR MaLR 0 428 1 323 290 14 55 chr2 149788969 149789081 -100898773 - MIR SINE MIR -36 226 120 30 27 0 0 chr2 149791063 149791100 -100896754 + AT_rich Low_complexity Low_complexity 1 37 0 4543 238 84 9 chr2 149791743 149793096 -100894758 + Charlie1a DNA MER1_type 1 1455 0 663 298 106 46 chr2 149793221 149793695 -100894159 + MLT1H LTR MaLR 32 533 -16 915 206 23 0 chr2 149794698 149794873 -100892981 + MER58A DNA MER1_type 45 223 -1 25 0 0 0 chr2 149795626 149795651 -100892203 + AT_rich Low_complexity Low_complexity 1 25 0 4134 79 9 94 chr2 149796197 149796891 -100890963 + MER41B LTR ERV1 1 635 0 728 190 0 21 chr2 149796897 149797039 -100890815 - FLAM_C SINE Alu -4 139 1 26 0 0 0 chr2 149797970 149797996 -100889858 + AT_rich Low_complexity Low_complexity 1 26 0 3612 105 66 37 chr2 149799462 149800055 -100887799 + MER4B LTR ERV1 1 610 0 2126 159 56 0 chr2 149800364 149800722 -100887132 + MER83B LTR ERV1 1 378 0 1978 180 214 55 chr2 149800993 149801705 -100886149 - LTR1B LTR ERV1 -1 825 1 2781 96 87 0 chr2 149802190 149802617 -100885237 + MER4C LTR ERV1 1 464 -1 243 0 0 0 chr2 149803839 149803866 -100883988 + (TC)n Simple_repeat Simple_repeat 2 28 0 207 0 0 0 chr2 149803865 149803888 -100883966 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 302 323 174 10 chr2 149803971 149804172 -100883682 + MIR SINE MIR 28 261 -1 225 0 0 0 chr2 149805349 149805374 -100882480 + (CA)n Simple_repeat Simple_repeat 2 26 0 505 213 84 109 chr2 149805406 149805679 -100882175 - Charlie8 DNA MER1_type -2161 256 33 23 33 0 0 chr2 149806269 149806299 -100881555 + AT_rich Low_complexity Low_complexity 1 30 0 270 314 0 0 chr2 149807430 149807516 -100880338 + (TA)n Simple_repeat Simple_repeat 1 86 0 1659 184 4 0 chr2 149807744 149808047 -100879807 - AluJb SINE Alu 0 308 5 322 292 118 34 chr2 149808069 149808247 -100879607 + L2 LINE L2 2601 2793 -521 275 311 22 22 chr2 149808378 149808468 -100879386 + L2 LINE L2 2985 3074 -198 24 0 0 0 chr2 149809193 149809217 -100878637 + AT_rich Low_complexity Low_complexity 1 24 0 243 0 0 0 chr2 149809442 149809469 -100878385 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 439 278 102 39 chr2 149809852 149810057 -100877797 - MIR SINE MIR -8 254 37 296 253 182 10 chr2 149810176 149810275 -100877579 + MLT1J1 LTR MaLR 46 161 -285 21 36 0 0 chr2 149810509 149810537 -100877317 + AT_rich Low_complexity Low_complexity 1 28 0 330 302 26 0 chr2 149810691 149810807 -100877047 + GA-rich Low_complexity Low_complexity 2 120 0 1284 277 51 36 chr2 149812027 149812640 -100875214 + L1ME3A LINE L1 5278 5899 -271 1141 159 68 18 chr2 149812655 149812875 -100874979 + MER46A DNA MER2_type 6 236 0 317 259 75 79 chr2 149812916 149812993 -100874861 + L1ME3A LINE L1 5918 5994 -176 1702 196 11 30 chr2 149812993 149813365 -100874489 + MLT1A1 LTR MaLR 1 365 0 317 259 75 79 chr2 149813365 149813515 -100874339 + L1ME3A LINE L1 5994 6144 -26 337 330 160 10 chr2 149814250 149814456 -100873398 - MIR SINE MIR -6 256 20 216 0 0 0 chr2 149815384 149815408 -100872446 + (A)n Simple_repeat Simple_repeat 1 24 0 2137 113 3 0 chr2 149815479 149815770 -100872084 - AluSg SINE Alu -18 292 1 1419 131 176 0 chr2 149816499 149816743 -100871111 + AluSx SINE Alu 2 288 -14 210 71 0 0 chr2 149816743 149816771 -100871083 + (CTAAA)n Simple_repeat Simple_repeat 3 30 0 2259 105 7 0 chr2 149817082 149817378 -100870476 - AluSp SINE Alu -15 298 1 230 56 28 0 chr2 149817540 149817576 -100870278 + (TG)n Simple_repeat Simple_repeat 1 37 0 320 321 65 38 chr2 149818321 149818505 -100869349 - MIR SINE MIR -69 193 5 747 207 0 0 chr2 149819678 149819818 -100868036 - FLAM_C SINE Alu -1 142 3 459 359 32 9 chr2 149820974 149821191 -100866663 - MIR SINE MIR -1 261 40 1391 204 129 29 chr2 149823224 149823635 -100864219 + LTR47A LTR ERVL 1 452 0 1143 190 56 37 chr2 149823981 149824249 -100863605 + AluJo SINE Alu 40 312 0 185 35 69 0 chr2 149824258 149824287 -100863567 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1454 197 30 10 chr2 149824304 149824604 -100863250 + AluSx SINE Alu 1 306 -6 1168 187 130 16 chr2 149825163 149825409 -100862445 - AluSx SINE Alu -38 274 1 198 0 0 0 chr2 149825410 149825432 -100862422 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 4695 141 55 13 chr2 149825434 149826002 -100861852 + Tigger1 DNA MER2_type 61 604 -1814 2169 100 63 29 chr2 149826002 149826352 -100861502 + THE1B LTR MaLR 3 364 0 11658 95 8 2 chr2 149826352 149827923 -100859931 + THE1B-int LTR MaLR 1 1580 0 2115 126 51 28 chr2 149827923 149828279 -100859575 + THE1B LTR MaLR 1 364 0 4695 141 55 13 chr2 149828279 149828496 -100859358 + Tigger1 DNA MER2_type 603 881 -1537 8574 135 25 53 chr2 149829713 149830322 -100857532 + Tigger1 DNA MER2_type 868 1492 -926 1604 181 7 7 chr2 149830322 149830610 -100857244 + AluJb SINE Alu 25 312 0 8574 135 25 53 chr2 149830610 149830642 -100857212 + Tigger1 DNA MER2_type 1492 1523 -895 2000 136 14 7 chr2 149830642 149830936 -100856918 + AluSx SINE Alu 1 296 -16 8574 135 25 53 chr2 149830936 149831888 -100855966 + Tigger1 DNA MER2_type 1523 2418 0 380 304 62 6 chr2 149832375 149832536 -100855318 - MIR SINE MIR -6 256 87 23 0 0 0 chr2 149833070 149833093 -100854761 + AT_rich Low_complexity Low_complexity 1 23 0 4175 140 42 12 chr2 149833447 149834139 -100853715 + MER50 LTR ERV1 1 713 -21 1673 170 50 27 chr2 149834490 149834790 -100853064 - AluJb SINE Alu 0 312 6 901 153 148 30 chr2 149834886 149835088 -100852766 + LTR51 LTR ERV1 1 226 -445 1226 237 157 91 chr2 149835343 149835937 -100851917 + MER21B LTR ERV1 19 651 -212 2378 95 3 0 chr2 149837052 149837358 -100850496 - AluSg SINE Alu -1 309 3 1430 191 48 15 chr2 149837512 149837688 -100850166 - AluJb SINE Alu 0 304 114 245 29 0 29 chr2 149837688 149837723 -100850131 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1430 191 48 15 chr2 149837723 149837841 -100850013 - AluJb SINE Alu -190 114 1 2341 168 10 0 chr2 149838009 149838408 -100849446 + MER57A LTR ERV1 1 403 0 606 144 27 0 chr2 149838411 149838522 -100849332 + LTR54B LTR ERV1 3 116 -382 1919 103 15 0 chr2 149838524 149838795 -100849059 + MER57A-int LTR ERV1 7261 7535 -2 2285 162 10 5 chr2 149838796 149839197 -100848657 + MER57A LTR ERV1 1 403 0 237 272 149 9 chr2 149839214 149839328 -100848526 - HAL1 LINE L1 -1744 763 634 2382 113 45 52 chr2 149839390 149839790 -100848064 + MER48 LTR ERV1 1 397 -1 28673 120 31 14 chr2 149839792 149845255 -100842599 + HERVH48 LTR ERV1 1 5653 -1001 1179 103 0 11 chr2 149845255 149845440 -100842414 + HERVH48 LTR ERV1 6472 6654 0 2578 94 32 52 chr2 149845440 149845846 -100842008 + MER48 LTR ERV1 1 398 0 1085 196 48 94 chr2 149845857 149846249 -100841605 + MLT1B LTR MaLR 1 374 -16 419 292 27 38 chr2 149846251 149846436 -100841418 - HAL1 LINE L1 -2025 482 300 3090 173 48 65 chr2 149846437 149847224 -100840630 + MER4E LTR ERV1 1 774 -5 216 0 0 0 chr2 149847297 149847321 -100840533 + (T)n Simple_repeat Simple_repeat 1 24 0 264 280 63 69 chr2 149847325 149847514 -100840340 - HAL1 LINE L1 -2316 191 4 245 319 72 36 chr2 149847589 149847648 -100840206 + L2 LINE L2 3125 3180 -92 1857 169 7 7 chr2 149847648 149847955 -100839899 - AluJb SINE Alu -5 307 1 245 319 72 36 chr2 149847955 149848033 -100839821 + L2 LINE L2 3180 3267 -5 29 28 0 0 chr2 149848708 149848744 -100839110 + AT_rich Low_complexity Low_complexity 1 36 0 26 88 0 0 chr2 149850264 149850332 -100837522 + AT_rich Low_complexity Low_complexity 1 68 0 2435 60 6 0 chr2 149850392 149850707 -100837147 - L1PA7 LINE L1 -3 6151 5835 368 238 156 0 chr2 149850929 149851051 -100836803 + MER63A DNA MER1_type 70 210 0 257 213 74 83 chr2 149851083 149851191 -100836663 + MIR SINE MIR 117 223 -39 1828 156 0 25 chr2 149852274 149852594 -100835260 + AluJo SINE Alu 1 312 0 1605 218 25 6 chr2 149853501 149853859 -100833995 + MLT1A1 LTR MaLR 1 365 0 1809 163 0 17 chr2 149854166 149854461 -100833393 - AluJb SINE Alu -22 290 1 450 0 0 0 chr2 149854820 149854870 -100832984 + (TATG)n Simple_repeat Simple_repeat 2 51 0 1645 185 7 4 chr2 149854874 149855150 -100832704 - AluJb SINE Alu -31 281 5 538 163 54 0 chr2 149855157 149855249 -100832605 - AluJ/FLAM SINE Alu -213 99 3 229 111 22 0 chr2 149855600 149855645 -100832209 + MER34 LTR ERV1 449 494 -48 23 0 0 0 chr2 149856597 149856620 -100831234 + AT_rich Low_complexity Low_complexity 1 23 0 1859 130 11 0 chr2 149856628 149856889 -100830965 - AluSx SINE Alu -48 264 1 921 145 0 14 chr2 149856889 149857027 -100830827 - AluSq/x SINE Alu -176 136 1 255 253 227 0 chr2 149857416 149857491 -100830363 + MIR SINE MIR 54 145 -63 1890 162 12 3 chr2 149857512 149857845 -100830009 - MER2 DNA MER2_type -9 336 1 22 0 0 0 chr2 149858089 149858111 -100829743 + AT_rich Low_complexity Low_complexity 1 22 0 769 162 0 0 chr2 149859078 149859195 -100828659 + FLAM_C SINE Alu 2 118 -15 25 0 0 0 chr2 149859195 149859220 -100828634 + AT_rich Low_complexity Low_complexity 1 25 0 635 249 30 0 chr2 149860180 149860349 -100827505 - MER58A DNA MER1_type -8 216 43 1133 181 107 80 chr2 149860502 149860877 -100826977 - MLT1B LTR MaLR -5 385 1 1776 97 27 0 chr2 149861610 149861869 -100825985 + LTR9B LTR ERV1 1 266 -378 1640 198 9 0 chr2 149861867 149862185 -100825669 - Tigger1 DNA MER2_type -2078 340 20 * 923 313 35 7 chr2 149862228 149862631 -100825223 + L1PA16 LINE L1 2 415 -7166 9837 215 23 21 chr2 149862700 149863670 -100824184 + L1PA16 LINE L1 3799 4766 -2838 2286 94 3 10 chr2 149863670 149863977 -100823877 + AluY SINE Alu 1 305 -6 9837 215 23 21 chr2 149863977 149864002 -100823852 + L1PA16 LINE L1 4766 4789 -2815 2536 80 3 0 chr2 149864002 149864313 -100823541 + AluSp SINE Alu 1 312 -1 9837 215 23 21 chr2 149864313 149864657 -100823197 + L1PA16 LINE L1 4789 5131 -2473 213 39 0 0 chr2 149864657 149864683 -100823171 + (CAA)n Simple_repeat Simple_repeat 2 27 0 9837 215 23 21 chr2 149864683 149866287 -100821567 + L1PA16 LINE L1 5131 6820 -784 1975 99 0 0 chr2 149866287 149866549 -100821305 + AluY SINE Alu 43 304 -7 9837 215 23 21 chr2 149866549 149867336 -100820518 + L1PA16 LINE L1 6820 7604 0 2292 102 0 0 chr2 149867747 149868040 -100819814 + AluY SINE Alu 1 293 -18 234 284 55 64 chr2 149868080 149868189 -100819665 - MER5B DNA MER1_type -31 147 40 28 71 0 0 chr2 149868352 149868408 -100819446 + AT_rich Low_complexity Low_complexity 1 56 0 5256 120 13 7 chr2 149868781 149869556 -100818298 + LTR17 LTR ERV1 1 780 0 27250 143 49 50 chr2 149869556 149875578 -100812276 + HERV17 LTR ERV1 2 6019 -2607 281 51 0 0 chr2 149875570 149875609 -100812245 + HERV17 LTR ERV1 7509 7547 -1079 * 643 117 0 0 chr2 149875609 149875703 -100812151 - AluY SINE Alu -12 299 206 2071 87 14 0 chr2 149875707 149875995 -100811859 + HERV17 LTR ERV1 8335 8626 0 5898 79 29 3 chr2 149875995 149876755 -100811099 + LTR17 LTR ERV1 1 780 0 1035 24 0 0 chr2 149876755 149876880 -100810974 + HERV17 LTR ERV1 5895 6019 -2607 265 50 25 0 chr2 149876871 149876911 -100810943 + HERV17 LTR ERV1 7508 7548 -1078 * 2052 77 21 3 chr2 149876901 149877188 -100810666 + HERV17 LTR ERV1 8335 8626 0 4942 97 30 74 chr2 149877188 149878002 -100809852 + LTR17 LTR ERV1 1 778 -2 1277 213 82 3 chr2 149878503 149878807 -100809047 + AluJb SINE Alu 1 312 0 831 222 117 4 chr2 149879407 149879673 -100808181 + L1ME1 LINE L1 2607 2902 -3244 646 272 5 5 chr2 149879687 149879904 -100807950 + L1ME1 LINE L1 5075 5291 -855 620 185 0 19 chr2 149879908 149880149 -100807705 + AluJo SINE Alu 13 310 -2 1066 209 37 61 chr2 149880151 149880528 -100807326 + L1ME1 LINE L1 5260 5627 -539 479 243 14 89 chr2 149880552 149880709 -100807145 + MER58C DNA MER1_type 7 145 -2275 1658 211 10 0 chr2 149880709 149881003 -100806851 + AluJb SINE Alu 9 305 -7 479 243 14 89 chr2 149881003 149881059 -100806795 + MER58C DNA MER1_type 145 204 -11 1237 253 54 23 chr2 149881065 149881508 -100806346 + L1ME1 LINE L1 5659 6115 -51 674 128 9 18 chr2 149881738 149881847 -100806007 - FLAM_C SINE Alu -23 120 13 431 233 80 13 chr2 149882073 149882223 -100805631 + L1ME3A LINE L1 5977 6136 -34 328 335 189 43 chr2 149883106 149883545 -100804309 + L2 LINE L2 1756 2258 -1056 412 272 109 62 chr2 149883548 149883868 -100803986 + MLT1J LTR MaLR 11 345 -166 1635 201 3 3 chr2 149884470 149884763 -100803091 + AluJb SINE Alu 1 293 -19 331 237 58 7 chr2 149885409 149885548 -100802306 + L1MB7 LINE L1 6039 6184 0 227 354 25 20 chr2 149885555 149885656 -100802198 + MIR3 SINE MIR 4 107 -110 21 36 0 0 chr2 149885721 149885749 -100802105 + AT_rich Low_complexity Low_complexity 1 28 0 343 276 95 59 chr2 149885772 149885906 -100801948 + L1MC/D LINE L1 5350 5478 -643 1974 163 0 0 chr2 149885906 149886206 -100801648 + AluJb SINE Alu 2 301 -11 343 276 95 59 chr2 149886206 149886437 -100801417 + L1MC/D LINE L1 5478 5736 -385 256 141 22 54 chr2 149886468 149886560 -100801294 + CT-rich Low_complexity Low_complexity 2 90 0 23 0 0 0 chr2 149886691 149886714 -100801140 + AT_rich Low_complexity Low_complexity 1 23 0 491 225 111 10 chr2 149887045 149887259 -100800595 + MER39 LTR ERV1 2 274 -433 656 225 24 36 chr2 149887285 149887573 -100800281 + MER39 LTR ERV1 357 707 0 204 269 75 99 chr2 149887727 149887928 -100799926 + L2 LINE L2 3118 3313 0 580 293 48 0 chr2 149888007 149888154 -100799700 - MER5A DNA MER1_type -35 154 1 1846 175 0 0 chr2 149888221 149888506 -100799348 - AluJo SINE Alu -26 286 2 2731 210 78 4 chr2 149888780 149889476 -100798378 - L1MB1 LINE L1 -24 6144 5398 2223 68 0 0 chr2 149889487 149889794 -100798060 - AluY SINE Alu 0 307 1 30 0 0 0 chr2 149891098 149891128 -100796726 + AT_rich Low_complexity Low_complexity 1 30 0 1073 78 0 0 chr2 149891518 149891647 -100796207 + AluSx SINE Alu 1 129 -184 1212 101 0 34 chr2 149891886 149892064 -100795790 + AluSx SINE Alu 139 310 0 224 205 313 0 chr2 149892079 149892162 -100795692 + MIR SINE MIR 148 256 -6 747 321 144 36 chr2 149892820 149893255 -100794599 - L2 LINE L2 0 3313 2926 2424 57 6 16 chr2 149893255 149893569 -100794285 + AluY SINE Alu 1 311 0 747 321 144 36 chr2 149893569 149893702 -100794152 - L2 LINE L2 -387 2926 2809 5767 60 0 0 chr2 149893702 149894422 -100793432 + L1PA6 LINE L1 5434 6153 -1 747 321 144 36 chr2 149894422 149894700 -100793154 - L2 LINE L2 -504 2809 2562 1200 168 61 84 chr2 149894700 149894997 -100792857 + AluJo SINE Alu 1 290 -12 747 321 144 36 chr2 149894997 149895093 -100792761 - L2 LINE L2 -751 2562 2262 337 374 35 23 chr2 149895573 149895744 -100792110 + L2 LINE L2 2918 3090 -182 196 354 121 0 chr2 149897787 149897886 -100789968 + MIR SINE MIR 81 191 -71 314 325 33 8 chr2 149899903 149900023 -100787831 + MIR SINE MIR 66 188 -74 3768 178 71 0 chr2 149900661 149901335 -100786519 + MER72 LTR ERV1 1 722 0 271 337 24 0 chr2 149901337 149901420 -100786434 - L2 LINE L2 -1 3271 3187 231 210 15 34 chr2 149902504 149902678 -100785176 + CT-rich Low_complexity Low_complexity 1 170 0 1977 71 0 16 chr2 149904351 149904632 -100783222 - AluY SINE Alu 0 311 35 386 159 11 57 chr2 149904921 149905009 -100782845 - L1MC2 LINE L1 -14 6330 6247 1809 187 0 3 chr2 149905017 149905317 -100782537 - AluJb SINE Alu -6 306 8 312 263 83 105 chr2 149905357 149905729 -100782125 - L1 LINE L1 -2967 3179 2816 414 0 0 0 chr2 149906344 149906390 -100781464 + (T)n Simple_repeat Simple_repeat 1 46 0 1337 33 0 0 chr2 149906623 149906775 -100781079 - AluYa8 SINE Alu 0 310 159 262 219 0 55 chr2 149907004 149907077 -100780777 + Alu SINE Alu 233 301 0 1100 294 127 67 chr2 149907443 149907650 -100780204 + MER52A LTR ERV1 643 836 -919 2024 119 11 0 chr2 149907650 149907935 -100779919 - AluSx SINE Alu -8 304 17 1100 294 127 67 chr2 149907935 149908773 -100779081 + MER52A LTR ERV1 836 1751 -4 265 44 0 89 chr2 149908957 149909002 -100778852 - FLAM SINE Alu -6 127 87 698 206 0 0 chr2 149909378 149909504 -100778350 + FLAM_C SINE Alu 1 126 -17 1379 168 79 34 chr2 149909937 149910228 -100777626 - AluJb SINE Alu -8 304 1 1698 167 3 41 chr2 149910323 149910641 -100777213 - AluJo SINE Alu -6 306 1 788 253 30 39 chr2 149911189 149911422 -100776432 + MLT1A1 LTR MaLR 1 231 -134 1029 213 20 0 chr2 149911460 149911657 -100776197 + MLT1A1 LTR MaLR 165 365 0 2019 101 3 57 chr2 149911857 149912222 -100775632 + AluSg SINE Alu 2 350 0 25 0 0 0 chr2 149912610 149912635 -100775219 + AT_rich Low_complexity Low_complexity 1 25 0 2117 125 3 3 chr2 149912701 149912997 -100774857 + AluSx SINE Alu 1 296 -16 23 0 0 0 chr2 149913673 149913696 -100774158 + AT_rich Low_complexity Low_complexity 1 23 0 6834 31 2 0 chr2 149914912 149915728 -100772126 + L1PA4 LINE L1 5338 6155 0 430 281 82 23 chr2 149915751 149915922 -100771932 - MIR SINE MIR -16 246 66 366 325 96 22 chr2 149915934 149916300 -100771554 + L1ME LINE L1 5255 5647 -519 1485 212 0 4 chr2 149916622 149916896 -100770958 + AluJb SINE Alu 1 273 -39 237 204 0 0 chr2 149917508 149917552 -100770302 + GA-rich Low_complexity Low_complexity 3 46 0 197 83 28 0 chr2 149918528 149918564 -100769290 + (TC)n Simple_repeat Simple_repeat 2 38 0 1930 142 3 13 chr2 149919418 149919720 -100768134 - AluJo SINE Alu -13 299 1 2258 99 0 10 chr2 149920387 149920700 -100767154 - AluY SINE Alu -1 310 1 1423 194 31 28 chr2 149923830 149924118 -100763736 - AluJo SINE Alu -23 289 1 24 32 0 0 chr2 149924507 149924538 -100763316 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr2 149926617 149926658 -100761196 + AT_rich Low_complexity Low_complexity 1 41 0 666 292 114 35 chr2 149926663 149927152 -100760702 - MER34 LTR ERV1 -5 537 10 198 394 101 11 chr2 149927344 149927412 -100760442 + MIR SINE MIR 3 63 -199 912 220 134 35 chr2 149927412 149927623 -100760231 - MER2 DNA MER2_type 0 344 91 1660 159 33 4 chr2 149927623 149927893 -100759961 - AluJb SINE Alu -16 296 19 912 220 134 35 chr2 149927893 149927994 -100759860 - MER2 DNA MER2_type -253 91 1 198 394 101 11 chr2 149927994 149928113 -100759741 + MIR SINE MIR 63 207 -55 21 57 0 0 chr2 149928195 149928230 -100759624 + AT_rich Low_complexity Low_complexity 1 35 0 305 335 61 18 chr2 149928424 149928588 -100759266 + MIR SINE MIR 21 191 -71 2387 160 34 24 chr2 149929030 149929535 -100758319 - L1MA7 LINE L1 -6 6285 5776 198 0 0 0 chr2 149929675 149929697 -100758157 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 189 107 0 0 chr2 149929944 149929972 -100757882 + (CA)n Simple_repeat Simple_repeat 2 29 0 * 212 0 36 0 chr2 149929971 149929999 -100757855 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 270 0 0 0 chr2 149929998 149930028 -100757826 + (CA)n Simple_repeat Simple_repeat 1 30 0 2035 109 3 67 chr2 149930222 149930552 -100757302 + AluSc SINE Alu 1 309 0 1754 172 0 10 chr2 149931464 149931754 -100756100 - AluJb SINE Alu -25 287 1 216 86 0 0 chr2 149932718 149932753 -100755101 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 502 330 174 17 chr2 149932956 149933523 -100754331 + L2 LINE L2 2651 3305 -8 21 57 0 0 chr2 149933740 149933775 -100754079 + AT_rich Low_complexity Low_complexity 1 35 0 1381 147 101 27 chr2 149933795 149934053 -100753801 - AluJo SINE Alu -33 279 3 256 274 80 18 chr2 149935737 149935850 -100752004 - MIR SINE MIR -43 219 100 313 238 109 68 chr2 149937464 149937611 -100750243 + L1ME LINE L1 5264 5416 -2392 31 26 0 0 chr2 149938990 149939028 -100748826 + AT_rich Low_complexity Low_complexity 1 38 0 314 333 21 43 chr2 149939757 149939991 -100747863 + L1ME LINE L1 5449 5677 -444 364 308 140 53 chr2 149940383 149940743 -100747111 - L2 LINE L2 -246 3067 2682 246 224 0 0 chr2 149941637 149941686 -100746168 - MLT2D LTR ERVL 0 397 349 752 110 19 7 chr2 149941697 149941851 -100746003 + (TCTA)n Simple_repeat Simple_repeat 2 157 0 974 259 32 26 chr2 149941851 149942137 -100745717 - MLT2D LTR ERVL -55 359 77 2276 254 87 23 chr2 149942154 149943234 -100744620 - L1ME2 LINE L1 -13 6151 4996 251 170 0 0 chr2 149943244 149943297 -100744557 - L1MA10 LINE L1 -2 6332 6280 1836 188 0 0 chr2 149943297 149943600 -100744254 + AluJb SINE Alu 1 303 -9 392 214 20 10 chr2 149943617 149943715 -100744139 - L1MA10 LINE L1 -40 6294 6196 1073 178 43 0 chr2 149944107 149944338 -100743516 - L1MB3 LINE L1 -3 6180 5940 237 297 0 14 chr2 149944341 149944415 -100743439 - L1ME2 LINE L1 -1161 4985 4913 803 236 71 25 chr2 149944418 149944698 -100743156 - L1ME2 LINE L1 -1508 4638 4346 2794 218 81 24 chr2 149944737 149945560 -100742294 - L1ME1 LINE L1 -69 6377 5602 1512 196 15 8 chr2 149945560 149945825 -100742029 + AluJo SINE Alu 1 267 -45 247 47 0 47 chr2 149945827 149945870 -100741984 + (TAAAA)n Simple_repeat Simple_repeat 2 42 0 2794 218 81 24 chr2 149945870 149945905 -100741949 - L1ME1 LINE L1 -844 5602 5480 12128 143 30 2 chr2 149945917 149948772 -100739082 + L1PA10 LINE L1 3280 6163 -5 1075 241 81 16 chr2 149948826 149949237 -100738617 - L1ME1 LINE L1 -3980 2446 1995 859 198 0 0 chr2 149949288 149949465 -100738389 - L1MD1 LINE L1 0 6242 6066 2877 194 51 26 chr2 149949765 149949903 -100737951 - L1MD1 LINE L1 -173 6069 5936 2329 78 0 0 chr2 149949903 149950197 -100737657 - AluY SINE Alu -17 294 1 2877 194 51 26 chr2 149950197 149950683 -100737171 - L1MD1 LINE L1 -306 5936 5429 1183 296 107 29 chr2 149950674 149951271 -100736583 - L1ME1 LINE L1 -5657 950 307 * 1615 216 148 18 chr2 149951360 149951805 -100736049 - MLT1D LTR MaLR -2 503 1 32 0 0 0 chr2 149951919 149951951 -100735903 + AT_rich Low_complexity Low_complexity 1 32 0 251 272 225 12 chr2 149952413 149952586 -100735268 + MIR SINE MIR 5 214 -48 22 0 0 0 chr2 149953101 149953123 -100734731 + AT_rich Low_complexity Low_complexity 1 22 0 355 198 0 18 chr2 149953618 149953729 -100734125 + (TA)n Simple_repeat Simple_repeat 2 110 0 460 356 35 15 chr2 149953905 149954166 -100733688 - L2 LINE L2 -1 3312 3047 903 267 238 14 chr2 149954719 149955228 -100732626 - HsTC2 DNA Tc2 -2 1896 1274 257 317 10 10 chr2 149955265 149955369 -100732485 - HsTC2 DNA Tc2 -1794 104 1 759 318 98 0 chr2 149955676 149955940 -100731914 + L2 LINE L2 2498 2787 -527 383 290 210 11 chr2 149955981 149956157 -100731697 + L2 LINE L2 3081 3291 -22 12984 129 38 71 chr2 149956745 149958800 -100729054 + Tigger1 DNA MER2_type 14 2134 -284 206 0 0 65 chr2 149958800 149958831 -100729023 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 518 191 11 0 chr2 149958837 149958931 -100728923 - AluJb SINE Alu -32 280 186 12984 129 38 71 chr2 149958931 149959261 -100728593 + Tigger1 DNA MER2_type 2139 2418 0 840 243 22 0 chr2 149960428 149960613 -100727241 - MER5A DNA MER1_type 0 189 1 290 265 53 112 chr2 149962593 149962763 -100725091 - LTR33A LTR ERVL -363 160 1 568 194 19 153 chr2 149963383 149963651 -100724203 + MER112 DNA MER1_type 26 257 -3 2233 137 27 3 chr2 149963936 149964420 -100723434 + L1PA16 LINE L1 5122 5620 -546 42069 36 24 1 chr2 149964427 149970444 -100717410 + L1PA3 LINE L1 1 6155 0 2930 158 42 11 chr2 149970453 149970996 -100716858 + L1PA16 LINE L1 5602 6161 -5 223 383 66 22 chr2 149971922 149972105 -100715749 + MIR SINE MIR 2 192 -70 223 204 56 0 chr2 149972160 149972214 -100715640 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 240 283 0 0 chr2 149972465 149972525 -100715329 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 209 217 54 98 chr2 149972848 149972940 -100714914 + MIR SINE MIR 113 200 -62 216 258 65 0 chr2 149973147 149973209 -100714645 - L2 LINE L2 0 3313 3248 1749 238 41 45 chr2 149973284 149973867 -100713987 + L1MD2 LINE L1 5743 6323 -36 264 352 16 24 chr2 149973949 149974074 -100713780 + L2 LINE L2 3190 3313 0 2155 114 7 3 chr2 149974316 149974654 -100713200 - AluSg SINE Alu 0 341 3 1861 168 111 13 chr2 149974703 149975091 -100712763 + MSTB LTR MaLR 1 426 0 1207 201 0 90 chr2 149975788 149976111 -100711743 + AluJo SINE Alu 1 294 -18 1381 211 3 33 chr2 149977818 149978121 -100709733 + AluJo SINE Alu 1 294 -18 281 282 41 67 chr2 149978123 149978318 -100709536 - MLT1L LTR MaLR -55 560 371 2029 84 53 7 chr2 149978936 149979221 -100708633 - AluSg SINE Alu -12 298 1 556 293 60 85 chr2 149979228 149979628 -100708226 + L2 LINE L2 2922 3311 -2 462 309 80 36 chr2 149981900 149982263 -100705591 + L1MC4a LINE L1 5525 5903 -1905 24 0 0 0 chr2 149982873 149982897 -100704957 + AT_rich Low_complexity Low_complexity 1 24 0 393 270 49 20 chr2 149982916 149983056 -100704798 - MIR SINE MIR -67 141 1 246 247 39 0 chr2 149983210 149983287 -100704567 - MER116 DNA Mariner 0 80 1 26 0 0 0 chr2 149983612 149983638 -100704216 + AT_rich Low_complexity Low_complexity 1 26 0 17050 185 29 11 chr2 149983779 149988322 -100699532 - L1PA14 LINE L1 -9 6152 1535 21 36 0 0 chr2 149988340 149988368 -100699486 + AT_rich Low_complexity Low_complexity 1 28 0 281 73 146 0 chr2 149988368 149988423 -100699431 - L1MB1 LINE L1 -1 6167 6105 1108 301 32 20 chr2 149988501 149989002 -100698852 - L1ME3A LINE L1 -5 6165 5659 22 0 0 0 chr2 149989002 149989024 -100698830 + AT_rich Low_complexity Low_complexity 1 22 0 420 289 46 34 chr2 149989036 149989386 -100698468 - L1ME3A LINE L1 -757 5389 5036 614 221 64 12 chr2 149989395 149989515 -100698339 + MER3 DNA MER1_type 10 143 -66 1264 186 0 118 chr2 149989515 149989854 -100698000 - AluJb SINE Alu -11 301 3 614 221 64 12 chr2 149989854 149989905 -100697949 + MER3 DNA MER1_type 143 190 -19 26 0 0 0 chr2 149989922 149989948 -100697906 + AT_rich Low_complexity Low_complexity 1 26 0 567 313 131 2 chr2 149989987 149990421 -100697433 - L1ME3A LINE L1 -1200 4946 4457 403 291 35 0 chr2 149990451 149990623 -100697231 - L1ME3A LINE L1 -1754 4392 4215 892 232 82 16 chr2 149990626 149990875 -100696979 - MLT2D LTR ERVL -62 492 83 26 0 0 0 chr2 149991815 149991841 -100696013 + AT_rich Low_complexity Low_complexity 1 26 0 478 351 31 18 chr2 149992982 149993207 -100694647 - MIR SINE MIR -21 241 14 258 328 92 0 chr2 149993553 149993672 -100694182 - L2 LINE L2 0 3272 3143 1962 218 76 18 chr2 149994460 149995062 -100692792 + Charlie1 DNA MER1_type 2049 2685 -76 1793 251 79 39 chr2 149995093 149996001 -100691853 - L1ME1 LINE L1 -5 6161 5065 1963 131 3 16 chr2 149996001 149996314 -100691540 + AluSq SINE Alu 1 309 -4 1793 251 79 39 chr2 149996314 149996917 -100690937 - L1ME1 LINE L1 -1101 5065 4488 18562 180 21 39 chr2 149996919 149998197 -100689657 + L1MA2 LINE L1 12 1311 -6254 3473 102 18 8 chr2 149998197 149998706 -100689148 + MER75 DNA T2_type 1 514 0 18562 180 21 39 chr2 149998706 150000096 -100687758 + L1MA2 LINE L1 1311 2724 -4841 1381 222 48 0 chr2 150000096 150000366 -100687488 + AluJb SINE Alu 3 285 -27 18562 180 21 39 chr2 150000366 150003491 -100684363 + L1MA2 LINE L1 2724 5677 -1888 324 0 0 0 chr2 150003491 150003527 -100684327 + (CA)n Simple_repeat Simple_repeat 1 36 0 18562 180 21 39 chr2 150003527 150004459 -100683395 + L1MA2 LINE L1 5677 6624 -941 2070 194 39 0 chr2 150004466 150004878 -100682976 - MSTA LTR MaLR 0 428 1 9301 178 14 8 chr2 150004878 150006505 -100681349 - MSTA-int LTR MaLR 0 1651 15 2096 150 34 29 chr2 150006518 150006899 -100680955 - MSTA LTR MaLR -42 386 4 6145 109 40 38 chr2 150006901 150007979 -100679875 + L1MA2 LINE L1 6637 7716 -7 1218 253 75 36 chr2 150008150 150008711 -100679143 - L1ME1 LINE L1 -1735 4411 3829 9777 182 23 44 chr2 150008723 150009641 -100678213 - L1MA4A LINE L1 -6 6999 6063 1729 189 117 8 chr2 150009641 150010027 -100677827 + MSTA LTR MaLR 1 428 0 1839 180 7 0 chr2 150010030 150010336 -100677518 - AluSx SINE Alu -4 308 1 9777 182 23 44 chr2 150010336 150015071 -100672783 - L1MA4A LINE L1 -944 6061 787 1304 251 108 31 chr2 150015072 150015778 -100672076 - L1ME1 LINE L1 -2673 3473 2714 255 160 60 0 chr2 150015815 150015865 -100671989 + Charlie1 DNA MER1_type 2703 2755 -6 1326 207 0 32 chr2 150016004 150016289 -100671565 - AluJo SINE Alu -26 286 11 481 182 27 0 chr2 150016324 150016434 -100671420 - L1PA16 LINE L1 -2 6164 6052 622 71 0 0 chr2 150016494 150016578 -100671276 - Alu SINE Alu -5 305 222 4021 161 14 6 chr2 150016578 150017431 -100670423 - L1PA16 LINE L1 -241 5925 5068 2005 164 26 17 chr2 150017454 150017869 -100669985 - L1MB3 LINE L1 -12 6171 5753 29 47 0 0 chr2 150018025 150018068 -100669786 + AT_rich Low_complexity Low_complexity 1 43 0 2098 176 21 19 chr2 150018069 150018502 -100669352 - L1MA5 LINE L1 -33 6267 5834 717 313 72 66 chr2 150018736 150019170 -100668684 + L3 LINE CR1 787 1226 -351 1672 181 51 3 chr2 150019170 150019463 -100668391 + AluJo SINE Alu 1 307 -5 717 313 72 66 chr2 150019463 150019530 -100668324 + L3 LINE CR1 1226 1291 -286 441 281 39 45 chr2 150020639 150020817 -100667037 + MER5A DNA MER1_type 13 189 0 325 257 73 52 chr2 150020862 150020998 -100666856 + LTR33A LTR ERVL 274 412 -111 770 245 7 0 chr2 150021022 150021173 -100666681 - L1M2 LINE L1 -5765 1801 1650 689 118 0 10 chr2 150021333 150021435 -100666419 - L1M2 LINE L1 -6301 1264 1164 266 298 53 0 chr2 150022538 150022632 -100665222 - MIR SINE MIR -74 188 90 1731 235 41 32 chr2 150022642 150023135 -100664719 + L2 LINE L2 2075 2571 -743 1999 136 147 5 chr2 150023152 150023527 -100664327 - MSTA LTR MaLR 0 428 1 502 41 27 0 chr2 150023581 150023654 -100664200 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 1122 237 4 17 chr2 150023664 150023896 -100663958 + MER45B DNA AcHobo 2 230 -810 1666 230 27 17 chr2 150023899 150024312 -100663542 + MER45B DNA AcHobo 405 821 -219 330 228 63 13 chr2 150024309 150024388 -100663466 + MER45B DNA AcHobo 955 1037 -3 * 1211 267 119 6 chr2 150024522 150025058 -100662796 - L1ME LINE L1 -368 5796 5202 231 88 0 0 chr2 150025194 150025228 -100662626 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 1048 308 106 27 chr2 150026577 150027418 -100660436 + L1ME LINE L1 2863 3769 -2377 2569 174 53 58 chr2 150027493 150028096 -100659758 + LTR9 LTR ERV1 1 600 -12 547 341 70 38 chr2 150028146 150028464 -100659390 + L1ME LINE L1 3846 4185 -1961 1830 157 36 41 chr2 150028464 150028828 -100659026 + THE1B LTR MaLR 2 363 -1 547 341 70 38 chr2 150028828 150028978 -100658876 + L1ME LINE L1 4185 4329 -1817 1484 127 4 16 chr2 150028978 150029145 -100658709 - AluSx SINE Alu -11 301 136 1730 97 15 103 chr2 150029145 150029475 -100658379 - AluSc SINE Alu -8 301 1 1484 127 4 16 chr2 150029475 150029551 -100658303 - AluSx SINE Alu -176 136 61 341 311 88 47 chr2 150029569 150029878 -100657976 + L1ME LINE L1 5266 5574 -588 1363 190 3 80 chr2 150030641 150030968 -100656886 - AluJo SINE Alu -8 304 3 2041 142 3 3 chr2 150031972 150032282 -100655572 + AluSg SINE Alu 1 310 0 21 0 0 0 chr2 150032509 150032530 -100655324 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr2 150032616 150032656 -100655198 + AT_rich Low_complexity Low_complexity 1 40 0 825 160 0 0 chr2 150032765 150032890 -100654964 + FRAM SINE Alu 33 157 -19 2673 39 0 0 chr2 150033170 150033481 -100654373 + AluY SINE Alu 1 311 0 1349 219 32 83 chr2 150033662 150034073 -100653781 - MLT1B LTR MaLR 0 390 1 1677 226 20 54 chr2 150034699 150035145 -100652709 - LTR40a LTR ERVL 0 519 89 1896 167 75 27 chr2 150035146 150035679 -100652175 + MLT2A2 LTR ERVL 1 554 0 320 226 16 0 chr2 150035705 150035767 -100652087 - LTR40a LTR ERVL -456 63 1 2276 90 3 3 chr2 150036703 150037002 -100650852 - AluSp SINE Alu -14 299 1 1087 254 43 29 chr2 150037026 150037373 -100650481 - L1ME1 LINE L1 -5 6161 5810 2547 118 5 3 chr2 150037772 150038146 -100649708 + THE1C LTR MaLR 1 375 0 5047 128 4 4 chr2 150038415 150039188 -100648666 + L1PB3 LINE L1 5380 6152 -2 24 53 0 0 chr2 150039910 150039948 -100647906 + AT_rich Low_complexity Low_complexity 1 38 0 1679 130 0 97 chr2 150040490 150040820 -100647034 + AluY SINE Alu 1 298 -13 395 331 28 7 chr2 150040947 150041089 -100646765 - MIR SINE MIR -109 153 9 285 250 83 0 chr2 150041551 150041659 -100646195 + MIR SINE MIR 96 212 -50 284 122 20 0 chr2 150042233 150042282 -100645572 + MADE1 DNA Mariner 30 79 -1 1326 265 38 14 chr2 150042282 150042704 -100645150 - L1MDa LINE L1 -4174 2366 1935 195 42 0 0 chr2 150042704 150042728 -100645126 + (TTA)n Simple_repeat Simple_repeat 3 26 0 43455 43 4 3 chr2 150042728 150048852 -100639002 - L1PA4 LINE L1 -18 6137 2 756 250 83 4 chr2 150048857 150049121 -100638733 - L1MDa LINE L1 -4620 1920 1636 22 35 0 0 chr2 150049514 150049543 -100638311 + AT_rich Low_complexity Low_complexity 1 29 0 762 330 65 32 chr2 150049798 150050271 -100637583 - LTR33 LTR ERVL -21 500 12 265 200 22 22 chr2 150052531 150052621 -100635233 + (TA)n Simple_repeat Simple_repeat 2 91 0 778 410 25 52 chr2 150052622 150053107 -100634747 + L1MD2 LINE L1 5887 6358 -1 400 199 144 72 chr2 150053108 150053289 -100634565 + L1MEc LINE L1 883 1076 -5320 510 297 92 22 chr2 150054129 150054358 -100633496 - MIR SINE MIR -14 248 4 209 325 61 61 chr2 150054580 150054811 -100633043 + L2 LINE L2 2273 2503 -811 33 0 0 0 chr2 150055245 150055278 -100632576 + AT_rich Low_complexity Low_complexity 1 33 0 681 219 14 20 chr2 150055469 150055615 -100632239 + MLT1E LTR MaLR 11 155 -438 31 26 0 0 chr2 150055840 150055878 -100631976 + AT_rich Low_complexity Low_complexity 1 38 0 229 386 18 44 chr2 150056149 150056263 -100631591 - L2 LINE L2 -95 3177 3067 419 262 39 0 chr2 150056608 150056711 -100631143 + MER5A DNA MER1_type 3 109 -80 250 290 32 11 chr2 150056851 150056944 -100630910 + MLT1L LTR MaLR 144 238 -377 679 289 42 8 chr2 150057031 150057270 -100630584 + MLT1L LTR MaLR 369 615 0 285 344 134 31 chr2 150057796 150058087 -100629767 - L2 LINE L2 -561 2753 2433 1598 238 78 80 chr2 150060868 150061473 -100626381 + MLT1E2 LTR MaLR 1 626 0 894 278 32 29 chr2 150061765 150062107 -100625747 + Tigger8 DNA MER2_type 258 600 -66 319 272 29 15 chr2 150062483 150062619 -100625235 + (TAGA)n Simple_repeat Simple_repeat 1 138 0 11784 89 0 8 chr2 150062656 150065095 -100622759 - L1PA7 LINE L1 -6 6148 3724 11594 94 12 40 chr2 150065095 150066958 -100620896 + L1PA7 LINE L1 1886 3696 -2450 769 218 78 0 chr2 150066963 150067142 -100620712 + MER105 DNA DNA 6 198 -6 424 343 108 5 chr2 150067479 150067692 -100620162 - MIR SINE MIR 0 262 28 239 319 71 9 chr2 150067954 150068067 -100619787 - MIR SINE MIR -106 156 37 887 201 0 12 chr2 150068553 150068717 -100619137 - FRAM SINE Alu 0 166 5 1786 205 91 65 chr2 150068719 150069347 -100618507 + LTR9B LTR ERV1 1 644 0 25 0 0 0 chr2 150069603 150069628 -100618226 + AT_rich Low_complexity Low_complexity 1 25 0 195 336 129 26 chr2 150069835 150069951 -100617903 - L2 LINE L2 0 3272 3145 1845 158 0 0 chr2 150070112 150070404 -100617450 - AluSx SINE Alu -20 292 1 526 287 31 20 chr2 150073490 150073685 -100614169 - L2 LINE L2 0 3313 3117 203 217 22 0 chr2 150073757 150073803 -100614051 + CT-rich Low_complexity Low_complexity 1 47 0 449 122 24 0 chr2 150073808 150073890 -100613964 + C-rich Low_complexity Low_complexity 2 85 0 1926 143 88 69 chr2 150074330 150074375 -100613479 - MSTA LTR MaLR 0 428 385 2480 65 7 0 chr2 150074375 150074683 -100613171 + AluY SINE Alu 2 311 0 1926 143 88 69 chr2 150074683 150075057 -100612797 - MSTA LTR MaLR -43 385 1 266 337 51 0 chr2 150075540 150075638 -100612216 - MER91C DNA MER1_type -3 137 35 1372 196 96 0 chr2 150075765 150076035 -100611819 + AluJb SINE Alu 6 301 -11 244 233 27 14 chr2 150076044 150076117 -100611737 + MIR SINE MIR 65 138 -124 21 0 0 0 chr2 150076368 150076389 -100611465 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 150077508 150077530 -100610324 + AT_rich Low_complexity Low_complexity 1 22 0 312 290 0 0 chr2 150078296 150078403 -100609451 + (CA)n Simple_repeat Simple_repeat 1 107 0 476 274 7 14 chr2 150078420 150078694 -100609160 + (CATA)n Simple_repeat Simple_repeat 1 272 0 297 51 0 0 chr2 150078896 150078935 -100608919 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 477 294 129 10 chr2 150079342 150079543 -100608311 + MIR SINE MIR 28 252 -10 789 223 120 50 chr2 150079656 150079956 -100607898 + MER5C DNA MER1_type 4 324 0 430 318 35 23 chr2 150080151 150080409 -100607445 - L1ME LINE L1 -352 5769 5509 11729 31 1 36 chr2 150080421 150081851 -100606003 - SVA Other Other -6 1380 1 2196 199 98 18 chr2 150082370 150082943 -100604911 - Tigger6a DNA MER2_type 0 1083 465 232 170 113 0 chr2 150082981 150083034 -100604820 + MIR SINE MIR 200 258 -4 1124 237 0 47 chr2 150083107 150083407 -100604447 - Tigger6a DNA MER2_type -634 449 164 801 167 0 0 chr2 150083428 150083566 -100604288 + Tigger6 DNA MER2_type 38 175 -1422 9674 205 10 21 chr2 150083578 150085856 -100601998 - L1 LINE L1 -1280 4866 2614 6309 155 76 33 chr2 150086265 150087645 -100600209 - L1PBb LINE L1 -3584 3278 1756 3997 185 25 52 chr2 150087645 150088641 -100599213 + LTR5 LTR ERVK 1 969 0 6309 155 76 33 chr2 150088641 150089404 -100598450 - L1PBb LINE L1 -5106 1756 1028 786 254 130 43 chr2 150089412 150089805 -100598049 - MER50 LTR ERV1 -298 436 10 2798 263 25 27 chr2 150089811 150090649 -100597205 - L1PBb LINE L1 -6025 838 3 23 0 0 0 chr2 150090848 150090871 -100596983 + AT_rich Low_complexity Low_complexity 1 23 0 346 296 104 15 chr2 150092223 150092358 -100595496 - L1ME4a LINE L1 -1 6120 5974 24 0 0 0 chr2 150092362 150092386 -100595468 + AT_rich Low_complexity Low_complexity 1 24 0 342 325 62 19 chr2 150092593 150092753 -100595101 - L1ME4a LINE L1 -302 5819 5653 301 272 79 93 chr2 150093386 150093739 -100594115 + L1MEd LINE L1 716 1063 -5056 231 275 0 12 chr2 150093771 150093851 -100594003 + L1MEd LINE L1 1168 1246 -5064 959 170 88 61 chr2 150095270 150095564 -100592290 - MER39 LTR ERV1 0 707 406 1100 208 76 42 chr2 150095631 150095987 -100591867 - MLT1C LTR MaLR -99 368 1 286 263 91 31 chr2 150096019 150096172 -100591682 - LTR48B LTR ERV1 -366 176 1 272 167 0 0 chr2 150096869 150096911 -100590943 + 5S rRNA rRNA 1 42 -79 1520 220 67 34 chr2 150097106 150097542 -100590312 - MLT1C LTR MaLR 0 467 18 277 341 11 0 chr2 150097718 150097806 -100590048 - L2 LINE L2 -5 3308 3220 206 350 87 87 chr2 150097901 150098167 -100589687 - L2 LINE L2 -349 2965 2700 225 0 0 0 chr2 150098643 150098668 -100589186 + (CA)n Simple_repeat Simple_repeat 1 25 0 2094 108 0 0 chr2 150099193 150099471 -100588383 - AluSc SINE Alu -18 291 14 951 0 0 0 chr2 150099967 150100073 -100587781 + AluY SINE Alu 1 106 -205 387 0 0 0 chr2 150100179 150100222 -100587632 + (A)n Simple_repeat Simple_repeat 1 43 0 4475 197 32 7 chr2 150100669 150101612 -100586242 + L1MC3 LINE L1 6820 7785 0 596 340 56 53 chr2 150101649 150102081 -100585773 + MLT1K LTR MaLR 115 547 -41 1698 55 5 0 chr2 150102104 150102323 -100585531 - L1PA7 LINE L1 0 6154 5935 371 194 77 158 chr2 150102613 150102636 -100585218 - L2 LINE L2 -13 3300 3277 2320 164 60 91 chr2 150102636 150102765 -100585089 - LTR9 LTR ERV1 -1 611 480 1900 92 0 65 chr2 150102765 150103059 -100584795 + AluSx SINE Alu 38 312 0 2320 164 60 91 chr2 150103059 150103559 -100584295 - LTR9 LTR ERV1 -132 480 1 371 194 77 158 chr2 150103559 150103731 -100584123 - L2 LINE L2 -36 3277 3121 1444 206 85 12 chr2 150103855 150104185 -100583669 + MLT2D LTR ERVL 13 366 -48 236 89 0 22 chr2 150104185 150104230 -100583624 + (TC)n Simple_repeat Simple_repeat 2 45 0 196 346 10 20 chr2 150104273 150104374 -100583480 - L2 LINE L2 -382 2931 2832 330 26 0 0 chr2 150104609 150104740 -100583114 + (CA)n Simple_repeat Simple_repeat 1 131 0 2800 152 23 29 chr2 150104632 150104701 -100583153 + L1MA5A LINE L1 5737 5805 -492 330 26 0 0 chr2 150104701 150104740 -100583114 + (CA)n Simple_repeat Simple_repeat 2 40 0 2800 152 23 29 chr2 150104740 150105228 -100582626 + L1MA5A LINE L1 5805 6291 -6 317 246 54 54 chr2 150105899 150106029 -100581825 - MARNA DNA Mariner -44 542 413 188 404 43 0 chr2 150106207 150106301 -100581553 - MIR SINE MIR -164 98 1 345 326 44 22 chr2 150107674 150107809 -100580045 + L2 LINE L2 3175 3312 -1 195 241 35 17 chr2 150108055 150108113 -100579741 - MIR SINE MIR -122 140 82 267 203 0 0 chr2 150108969 150109033 -100578821 + CT-rich Low_complexity Low_complexity 2 65 0 1476 145 217 22 chr2 150112450 150112865 -100574989 + LTR54B LTR ERV1 1 496 -2 198 350 82 0 chr2 150113348 150113445 -100574409 + MIR SINE MIR 46 150 -112 2238 116 0 0 chr2 150113574 150113884 -100573970 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr2 150115125 150115147 -100572707 + AT_rich Low_complexity Low_complexity 1 22 0 868 90 0 15 chr2 150115149 150115283 -100572571 - L1MA5 LINE L1 0 6300 6169 551 314 60 67 chr2 150115424 150115723 -100572131 - L3 LINE CR1 -25 1552 1256 256 398 35 0 chr2 150115737 150115850 -100572004 - L3 LINE CR1 -455 1122 1006 191 379 23 0 chr2 150116478 150116565 -100571289 - L3 LINE CR1 -1132 445 357 226 259 19 0 chr2 150118037 150118091 -100569763 + MLT1K LTR MaLR 517 571 -17 1879 132 33 10 chr2 150118802 150119105 -100568749 - AluSx SINE Alu -2 310 1 245 206 32 0 chr2 150120156 150120219 -100567635 + (TGAA)n Simple_repeat Simple_repeat 1 65 0 23 33 0 0 chr2 150120442 150120472 -100567382 + AT_rich Low_complexity Low_complexity 1 30 0 2142 113 0 0 chr2 150120635 150120946 -100566908 + AluSx SINE Alu 1 312 0 214 125 36 36 chr2 150121308 150121364 -100566490 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 345 347 79 18 chr2 150121484 150121876 -100565978 + HAL1 LINE L1 1109 1524 -983 7567 92 36 19 chr2 150122546 150124427 -100563427 + L1PA7 LINE L1 4241 6151 -3 230 345 73 18 chr2 150124625 150124735 -100563119 - L2 LINE L2 -2 3270 3155 351 78 0 0 chr2 150124737 150124788 -100563066 + (CA)n Simple_repeat Simple_repeat 2 52 0 315 146 0 0 chr2 150124947 150125002 -100562852 + (CA)n Simple_repeat Simple_repeat 2 56 0 245 130 14 101 chr2 150125034 150125103 -100562751 - HSMAR1 DNA Mariner -1224 63 1 21 57 0 0 chr2 150125108 150125143 -100562711 + AT_rich Low_complexity Low_complexity 1 35 0 2030 189 53 35 chr2 150125232 150125665 -100562189 + MLT2B3 LTR ERVL 75 515 -39 34 65 0 0 chr2 150125695 150125757 -100562097 + AT_rich Low_complexity Low_complexity 1 62 0 23 78 0 0 chr2 150125923 150125974 -100561880 + AT_rich Low_complexity Low_complexity 1 51 0 194 264 0 11 chr2 150125986 150126077 -100561777 + (TA)n Simple_repeat Simple_repeat 2 91 0 250 407 7 0 chr2 150126118 150126263 -100561591 - L2 LINE L2 -216 3056 2911 273 230 30 27 chr2 150126761 150126902 -100560952 + HsTC2 DNA Tc2 3 1860 -38 2069 123 0 3 chr2 150127222 150127522 -100560332 - AluSg SINE Alu -11 299 1 193 185 123 46 chr2 150128466 150128531 -100559323 + MIR SINE MIR 186 255 -7 767 253 0 26 chr2 150128915 150129105 -100558749 - MER5A DNA MER1_type -3 186 2 444 312 169 17 chr2 150129451 150129682 -100558172 + MLT1L LTR MaLR 350 615 0 1278 289 87 40 chr2 150132660 150133322 -100554532 + Charlie2a DNA MER1_type 169 877 -1985 1953 141 3 3 chr2 150133322 150133626 -100554228 - AluSq SINE Alu -9 304 1 1278 289 87 40 chr2 150133626 150133769 -100554085 + Charlie2a DNA MER1_type 877 1012 -1850 23 33 0 0 chr2 150133951 150133981 -100553873 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 150134089 150134117 -100553737 + AT_rich Low_complexity Low_complexity 1 28 0 2662 254 65 14 chr2 150134323 150135158 -100552696 - L1MC/D LINE L1 -2063 5745 4954 333 0 0 0 chr2 150135158 150135195 -100552659 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 2662 254 65 14 chr2 150135195 150135510 -100552344 - L1MC/D LINE L1 -2854 4954 2814 1650 150 50 9 chr2 150135510 150135830 -100552024 - L1PA16 LINE L1 0 6166 5834 1869 134 0 11 chr2 150135838 150136142 -100551712 - AluSx SINE Alu 0 301 1 524 39 0 51 chr2 150136230 150136366 -100551488 - L1PA3 LINE L1 0 6155 6079 1105 282 35 32 chr2 150136390 150136954 -100550900 + Charlie2a DNA MER1_type 1120 1685 -1177 302 169 15 0 chr2 150137084 150137149 -100550705 + GA-rich Low_complexity Low_complexity 2 67 0 973 276 77 59 chr2 150137175 150137437 -100550417 + Charlie2a DNA MER1_type 1803 2059 -803 1594 161 28 0 chr2 150137437 150137728 -100550126 + L1PB4 LINE L1 5858 6156 0 973 276 77 59 chr2 150137728 150138209 -100549645 + Charlie2a DNA MER1_type 2059 2559 -303 325 301 67 10 chr2 150138257 150138450 -100549404 + Charlie2a DNA MER1_type 2625 2828 -34 851 149 155 0 chr2 150139804 150139978 -100547876 + MLT2D LTR ERVL 1 201 -213 950 226 34 15 chr2 150139978 150140101 -100547753 + AluJo SINE Alu 1 131 -181 213 39 0 0 chr2 150140101 150140127 -100547727 + (CAA)n Simple_repeat Simple_repeat 2 27 0 950 226 34 15 chr2 150140127 150140207 -100547647 + AluJo SINE Alu 131 208 -104 343 161 12 12 chr2 150140788 150140869 -100546985 + CT-rich Low_complexity Low_complexity 2 82 0 2362 61 7 3 chr2 150141917 150142211 -100545643 + AluY SINE Alu 1 295 -16 329 292 155 25 chr2 150144020 150144297 -100543557 - L1ME4a LINE L1 -235 5886 5574 683 231 0 8 chr2 150145108 150145238 -100542616 + MLT1D LTR MaLR 1 129 -376 1028 257 23 40 chr2 150145242 150145563 -100542291 - MLT1B LTR MaLR -4 386 72 1071 185 10 10 chr2 150145563 150145758 -100542096 + MER2 DNA MER2_type 3 197 -148 279 224 149 0 chr2 150145813 150145880 -100541974 - MLT1C LTR MaLR -313 77 1 1060 210 77 4 chr2 150145882 150146115 -100541739 + MLT1D LTR MaLR 127 376 -129 291 364 40 13 chr2 150146614 150146842 -100541012 + HAL1 LINE L1 1505 1738 -769 2398 134 13 8 chr2 150146904 150147277 -100540577 + THE1C LTR MaLR 1 375 0 673 300 57 4 chr2 150148081 150148308 -100539546 - LTR40b LTR ERVL -34 428 190 22 0 0 0 chr2 150148357 150148379 -100539475 + AT_rich Low_complexity Low_complexity 1 22 0 297 290 85 43 chr2 150148464 150148792 -100539062 + L1M4 LINE L1 3878 4219 -1927 1334 231 36 66 chr2 150149084 150149522 -100538332 - LTR40c LTR ERVL -13 452 28 759 182 104 7 chr2 150150181 150150335 -100537519 + AluJb SINE Alu 132 300 -12 25 0 0 0 chr2 150150461 150150486 -100537368 + AT_rich Low_complexity Low_complexity 1 25 0 2267 85 24 0 chr2 150150546 150150839 -100537015 + AluY SINE Alu 5 304 -7 1282 199 24 7 chr2 150151495 150151792 -100536062 + MER33 DNA MER1_type 1 302 -22 358 254 67 15 chr2 150152697 150152831 -100535023 - MIR SINE MIR -56 206 66 1805 196 33 0 chr2 150153333 150153670 -100534184 - MER7A DNA MER2_type 0 346 1 301 295 58 51 chr2 150154678 150154834 -100533020 + MIR SINE MIR 49 205 -57 22 35 0 0 chr2 150154949 150154978 -100532876 + AT_rich Low_complexity Low_complexity 1 29 0 1738 171 4 0 chr2 150155650 150155930 -100531924 + AluJb SINE Alu 1 281 -31 31 44 0 0 chr2 150156151 150156196 -100531658 + AT_rich Low_complexity Low_complexity 1 45 0 2256 87 0 6 chr2 150158344 150158655 -100529199 - L1PA8 LINE L1 -3 6169 5861 7818 170 13 25 chr2 150158657 150160216 -100527638 - L1P LINE L1 -3825 2321 782 192 206 54 76 chr2 150160491 150160583 -100527271 - MER5C DNA MER1_type -41 283 194 1593 197 27 0 chr2 150162556 150162856 -100524998 - AluJo SINE Alu 0 312 5 5829 140 42 20 chr2 150162894 150163901 -100523953 + L1P3 LINE L1 10 1038 -5423 911 61 53 0 chr2 150164001 150164132 -100523722 - L1P LINE L1 -900 5246 5109 647 260 25 0 chr2 150164144 150164344 -100523510 - L1M4 LINE L1 -743 5403 5199 224 359 62 7 chr2 150164435 150164580 -100523274 + L2 LINE L2 2621 2773 -541 26 30 0 0 chr2 150166065 150166098 -100521756 + AT_rich Low_complexity Low_complexity 1 33 0 340 321 73 28 chr2 150166098 150166316 -100521538 - MIR SINE MIR -12 250 23 601 234 253 34 chr2 150166480 150166745 -100521109 + MSTD LTR MaLR 1 323 -73 21 36 0 0 chr2 150167044 150167072 -100520782 + AT_rich Low_complexity Low_complexity 1 28 0 59 0 0 0 chr2 150167091 150167150 -100520704 + AT_rich Low_complexity Low_complexity 1 59 0 2806 255 56 40 chr2 150167167 150169442 -100518412 + L1MDb LINE L1 7 2243 -4163 2310 53 0 0 chr2 150169442 150169760 -100518094 + AluY SINE Alu 1 318 0 2806 255 56 40 chr2 150169760 150169987 -100517867 + L1MDb LINE L1 2243 2465 -3941 1794 219 58 72 chr2 150169987 150170557 -100517297 + MER68 LTR ERV1 1 562 0 2806 255 56 40 chr2 150170557 150171113 -100516741 + L1MDb LINE L1 2465 3013 -3393 251 159 0 0 chr2 150171130 150171174 -100516680 + L1MDb LINE L1 1066 1109 -5300 1570 252 42 16 chr2 150171182 150171869 -100515985 + L1MDb LINE L1 3033 3737 -2669 1196 266 80 0 chr2 150171900 150172073 -100515781 + L1MD2 LINE L1 5965 6123 -236 237 33 0 0 chr2 150172073 150172103 -100515751 + (CA)n Simple_repeat Simple_repeat 1 30 0 1196 266 80 0 chr2 150172103 150172290 -100515564 + L1MD2 LINE L1 6123 6354 -5 281 311 104 27 chr2 150172337 150172520 -100515334 - HAL1 LINE L1 -920 1587 1391 3485 134 17 8 chr2 150172625 150173448 -100514406 - HERVH LTR ERV1 -6637 1076 1 1959 81 45 6 chr2 150173458 150173831 -100514023 - LTR7 LTR ERV1 -10 440 1 1372 283 92 41 chr2 150173934 150174967 -100512887 + L1MCc LINE L1 787 1874 -4887 1305 259 63 17 chr2 150175183 150175770 -100512084 + L1MCc LINE L1 3008 3621 -3320 1907 171 107 11 chr2 150175774 150176415 -100511439 - L1M2 LINE L1 -685 5615 4913 230 203 0 34 chr2 150176404 150176463 -100511391 + L1MD3 LINE L1 7637 7693 -302 * 3138 198 20 64 chr2 150176689 150177497 -100510357 - L1MB8 LINE L1 -2 6176 5405 * 7289 23 1 2 chr2 150177483 150178342 -100509512 - L1PA3 LINE L1 0 6155 5298 548 215 15 31 chr2 150178442 150178572 -100509282 + L1MC3 LINE L1 7156 7283 -502 1944 191 37 42 chr2 150178574 150178821 -100509033 - MSTB1 LTR MaLR 0 432 186 2007 129 3 0 chr2 150178821 150179115 -100508739 - AluSg SINE Alu -15 295 1 1944 191 37 42 chr2 150179115 150179301 -100508553 - MSTB1 LTR MaLR -246 186 1 1438 220 19 66 chr2 150179301 150179677 -100508177 - MLT1A2 LTR MaLR -16 358 1 1754 160 23 102 chr2 150179684 150180000 -100507854 + L1MC3 LINE L1 7310 7583 -202 2020 138 0 0 chr2 150180000 150180290 -100507564 - AluSx SINE Alu -19 293 4 1754 160 23 102 chr2 150180290 150180416 -100507438 + L1MC3 LINE L1 7583 7717 -68 250 270 10 30 chr2 150180523 150180623 -100507231 - L1ME LINE L1 -472 5649 5552 604 300 70 13 chr2 150181960 150182187 -100505667 - MIR SINE MIR -7 255 16 227 288 102 34 chr2 150182357 150182475 -100505379 - L2 LINE L2 -8 3305 3180 27 29 0 0 chr2 150182479 150182513 -100505341 + AT_rich Low_complexity Low_complexity 1 34 0 850 339 92 37 chr2 150182753 150183565 -100504289 - L2 LINE L2 -568 2746 1890 7958 127 9 13 chr2 150186071 150187341 -100500513 + HERVH LTR ERV1 1740 3004 -4709 941 140 7 0 chr2 150187311 150187461 -100500393 + HERVH LTR ERV1 3140 3290 -4423 * 7071 165 39 38 chr2 150187451 150188969 -100498885 + HERVH LTR ERV1 3492 5011 -2702 2677 112 11 33 chr2 150188958 150189413 -100498441 + HERVH LTR ERV1 7269 7713 0 * 2072 89 7 7 chr2 150189413 150189801 -100498053 + LTR7 LTR ERV1 1 439 -11 21 57 0 0 chr2 150190159 150190194 -100497660 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr2 150190411 150190439 -100497415 + AT_rich Low_complexity Low_complexity 1 28 0 1515 189 128 128 chr2 150190683 150191509 -100496345 - LTR1B LTR ERV1 0 826 1 1574 166 3 75 chr2 150191551 150191870 -100495984 - AluJb SINE Alu -16 296 1 2180 239 75 30 chr2 150192289 150192929 -100494925 - MER21B LTR ERV1 -80 783 115 300 250 28 37 chr2 150193125 150193233 -100494621 + LTR37A LTR ERV1 221 327 -99 1613 198 50 13 chr2 150193246 150193656 -100494198 - MLT1B LTR MaLR -9 458 1 255 191 24 36 chr2 150193657 150193741 -100494113 + LTR37A LTR ERV1 330 412 -14 181 317 40 69 chr2 150194847 150194948 -100492906 + MIR SINE MIR 109 206 -56 199 365 39 28 chr2 150195157 150195335 -100492519 - L2 LINE L2 -692 2622 2443 409 338 97 38 chr2 150195420 150196014 -100491840 + L2 LINE L2 2676 3309 -4 1454 161 12 0 chr2 150196319 150196561 -100491293 + AluSx SINE Alu 1 245 -67 1649 221 14 6 chr2 150197139 150197496 -100490358 + MLT1A1 LTR MaLR 4 363 -2 189 0 0 0 chr2 150198171 150198192 -100489662 + (T)n Simple_repeat Simple_repeat 1 21 0 306 106 0 0 chr2 150199240 150199287 -100488567 + (TG)n Simple_repeat Simple_repeat 2 48 0 2087 113 6 49 chr2 150200779 150201106 -100486748 - AluSq SINE Alu 0 313 1 2021 135 13 7 chr2 150201512 150201815 -100486039 + AluSx SINE Alu 1 305 -7 2725 134 19 0 chr2 150201971 150202389 -100485465 + MSTA LTR MaLR 3 428 0 28 0 0 0 chr2 150202503 150202531 -100485323 + AT_rich Low_complexity Low_complexity 1 28 0 1999 279 71 37 chr2 150202545 150203625 -100484229 + L1MEc LINE L1 50 1166 -5230 584 139 62 0 chr2 150203634 150203763 -100484091 + L1MC3 LINE L1 7649 7785 0 377 292 53 75 chr2 150204737 150204963 -100482891 - HAL1 LINE L1 -2277 230 10 1396 219 125 6 chr2 150205909 150206261 -100481593 - MSTD LTR MaLR 0 396 3 30 0 0 0 chr2 150206424 150206454 -100481400 + AT_rich Low_complexity Low_complexity 1 30 0 334 272 41 31 chr2 150206783 150206978 -100480876 + L1MD2 LINE L1 6141 6337 -22 2257 39 46 4 chr2 150207188 150207469 -100480385 - AluY SINE Alu -18 293 1 25 31 0 0 chr2 150207526 150207558 -100480296 + AT_rich Low_complexity Low_complexity 1 32 0 2348 97 0 0 chr2 150208191 150208491 -100479363 - AluSg SINE Alu -10 300 1 534 312 115 20 chr2 150208503 150208756 -100479098 - MLT1J2 LTR MaLR -4 446 170 21 0 0 0 chr2 150208763 150208784 -100479070 + AT_rich Low_complexity Low_complexity 1 21 0 618 159 23 61 chr2 150208837 150208969 -100478885 - MER45A DNA AcHobo 0 178 52 2020 208 71 7 chr2 150209043 150209505 -100478349 - MLT1D LTR MaLR -13 492 1 224 111 56 14 chr2 150210065 150210137 -100477717 + A-rich Low_complexity Low_complexity 1 75 0 481 316 46 46 chr2 150210711 150211015 -100476839 - MLT1I LTR MaLR -38 371 68 2231 142 42 70 chr2 150211326 150211672 -100476182 + MER47B DNA MER2_type 1 334 -1989 2124 122 10 0 chr2 150211672 150211967 -100475887 - AluSq SINE Alu -11 302 5 2231 142 42 70 chr2 150211967 150212049 -100475805 + MER47B DNA MER2_type 334 417 -1 513 273 79 91 chr2 150212152 150212569 -100475285 + MLT1J LTR MaLR 82 493 -18 544 324 5 0 chr2 150213270 150213445 -100474409 - L1M3d LINE L1 -5381 510 205 4022 135 89 106 chr2 150213448 150214847 -100473007 - pTR5 LTR ERV1 0 2438 743 1500 250 25 8 chr2 150214847 150215207 -100472647 - L1M3d LINE L1 -5524 367 2 540 0 0 0 chr2 150217988 150218048 -100469806 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 271 339 6 12 chr2 150219912 150220080 -100467774 + GA-rich Low_complexity Low_complexity 2 168 0 886 222 27 0 chr2 150220457 150220642 -100467212 - MER58A DNA MER1_type -16 208 19 2271 140 20 90 chr2 150221543 150222058 -100465796 - MER51C LTR ERV1 -181 459 1 22 0 0 0 chr2 150222168 150222190 -100465664 + AT_rich Low_complexity Low_complexity 1 22 0 321 106 0 0 chr2 150224106 150224153 -100463701 + MADE1 DNA Mariner 33 79 -1 6292 120 67 22 chr2 150224233 150225351 -100462503 - Tigger3b DNA MER2_type -63 1168 1 664 181 72 0 chr2 150226520 150226686 -100461168 - MER53 DNA DNA -11 178 1 853 219 0 0 chr2 150227333 150227484 -100460370 + FAM SINE Alu 12 162 -23 412 246 85 15 chr2 150227725 150227855 -100459999 + MIR SINE MIR 111 249 -13 759 242 88 42 chr2 150227975 150228235 -100459619 - LTR27 LTR ERV1 0 636 365 1333 248 75 28 chr2 150228342 150228826 -100459028 - MER21B LTR ERV1 -48 815 383 398 282 48 0 chr2 150228847 150228971 -100458883 - MER21B LTR ERV1 -636 227 98 278 211 0 35 chr2 150229070 150229127 -100458727 - MER21B LTR ERV1 -792 71 17 703 209 87 32 chr2 150230653 150230930 -100456924 + MER2 DNA MER2_type 1 335 -10 333 321 96 34 chr2 150230977 150231186 -100456668 + MIR SINE MIR 11 232 -30 1629 197 40 25 chr2 150231396 150231725 -100456129 + L1PB4 LINE L1 5647 5985 -171 2225 98 0 0 chr2 150231725 150232011 -100455843 + AluSc SINE Alu 5 290 -19 1629 197 40 25 chr2 150232011 150232082 -100455772 + L1PB4 LINE L1 5985 6053 -103 42302 38 22 2 chr2 150232429 150238459 -100449395 + L1PA2 LINE L1 1 6153 -2 22 70 0 0 chr2 150239068 150239111 -100448743 + AT_rich Low_complexity Low_complexity 1 43 0 196 241 169 24 chr2 150239419 150239502 -100448352 - MER5A DNA MER1_type 0 189 95 22 0 0 0 chr2 150239941 150239963 -100447891 + AT_rich Low_complexity Low_complexity 1 22 0 26 82 0 0 chr2 150243016 150243077 -100444777 + AT_rich Low_complexity Low_complexity 1 61 0 696 238 88 66 chr2 150244245 150244715 -100443139 - MLT1H1 LTR MaLR 0 595 27 22 0 0 0 chr2 150244921 150244943 -100442911 + AT_rich Low_complexity Low_complexity 1 22 0 455 338 56 45 chr2 150245035 150245301 -100442553 - L3 LINE CR1 -34 1543 1275 24 32 0 0 chr2 150245721 150245752 -100442102 + AT_rich Low_complexity Low_complexity 1 31 0 248 262 182 12 chr2 150246289 150246412 -100441442 + MIR SINE MIR 2 140 -68 286 349 55 23 chr2 150247480 150247698 -100440156 - MLT1L LTR MaLR -2 613 389 492 186 20 0 chr2 150247716 150247818 -100440036 - MSTC LTR MaLR -4 424 321 323 306 50 71 chr2 150248785 150249122 -100438732 + MLT1I LTR MaLR 74 403 -6 217 44 0 67 chr2 150249572 150249617 -100438237 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 3672 36 7 2 chr2 150249622 150250071 -100437783 - L1PA5 LINE L1 -1 6153 5703 472 288 0 0 chr2 150250186 150250318 -100437536 + L1M2 LINE L1 12 143 -6706 2326 168 51 25 chr2 150250325 150251119 -100436735 + L1M1 LINE L1 4840 5658 -645 419 184 20 43 chr2 150252554 150253025 -100434829 + (TA)n Simple_repeat Simple_repeat 1 460 0 595 310 95 16 chr2 150253494 150253736 -100434118 + MIR SINE MIR 1 261 -1 291 305 45 39 chr2 150254096 150254250 -100433604 - L2 LINE L2 0 3313 3159 222 218 8 150 chr2 150254431 150254464 -100433390 - L2 LINE L2 0 3313 3277 2765 167 61 81 chr2 150254464 150255169 -100432685 + LTR8 LTR ERV1 1 691 0 222 218 8 150 chr2 150255169 150255268 -100432586 - L2 LINE L2 -36 3277 3200 4204 202 86 30 chr2 150255383 150256138 -100431716 + Charlie1 DNA MER1_type 1449 2296 -465 2669 129 28 67 chr2 150256138 150256648 -100431206 + LTR2B LTR ERV1 1 490 0 4204 202 86 30 chr2 150256648 150257083 -100430771 + Charlie1 DNA MER1_type 2296 2705 -56 559 258 16 0 chr2 150257083 150257265 -100430589 + LTR41 LTR ERVL 1 185 -588 346 284 11 99 chr2 150257662 150257944 -100429910 + LTR41 LTR ERVL 510 766 -7 2172 143 22 6 chr2 150257962 150258318 -100429536 - THE1B LTR MaLR -2 362 1 274 103 0 0 chr2 150258322 150258361 -100429493 + Charlie1 DNA MER1_type 2723 2761 0 924 312 61 33 chr2 150258674 150259068 -100428786 + L2 LINE L2 2539 2943 -371 281 233 67 44 chr2 150259094 150259184 -100428670 + L2 LINE L2 3222 3313 0 330 269 31 15 chr2 150260629 150260759 -100427095 + MLT1G LTR MaLR 1 132 -458 300 351 31 19 chr2 150260969 150261228 -100426626 + MLT1G-int LTR MaLR 270 531 -840 422 286 52 19 chr2 150261323 150261536 -100426318 - LTR16B LTR ERVL -11 453 234 427 293 26 0 chr2 150261551 150261667 -100426187 - LTR16B LTR ERVL -344 120 2 436 315 68 54 chr2 150261677 150262160 -100425694 - HERV16 LTR ERVL 0 4996 4507 873 363 53 43 chr2 150262235 150262547 -100425307 - ERVL LTR ERVL -1113 4651 4344 2027 139 0 0 chr2 150262547 150262850 -100425004 + AluSg SINE Alu 1 303 -7 873 363 53 43 chr2 150262850 150263566 -100424288 - ERVL LTR ERVL -1420 4344 3612 2009 279 49 13 chr2 150263777 150264411 -100423443 - ERVL LTR ERVL -2159 2837 2181 1046 316 52 7 chr2 150264420 150264863 -100422991 - LTR16B LTR ERVL 0 464 2 261 0 0 0 chr2 150265350 150265379 -100422475 + (CAA)n Simple_repeat Simple_repeat 2 30 0 310 243 100 129 chr2 150265608 150265818 -100422036 + MLT1G-int LTR MaLR 1107 1310 -61 1042 256 104 32 chr2 150265879 150266402 -100421452 + MLT1G LTR MaLR 3 588 -2 220 234 31 16 chr2 150266864 150266928 -100420926 + GA-rich Low_complexity Low_complexity 1 65 0 2039 114 49 7 chr2 150269981 150270288 -100417566 + HSMAR1 DNA Mariner 79 398 -889 1374 190 13 13 chr2 150270290 150270590 -100417264 + L1MA4A LINE L1 5824 6123 -180 377 253 11 0 chr2 150270593 150270684 -100417170 + L1MA4A LINE L1 6189 6280 -23 323 287 53 47 chr2 150272937 150273005 -100414849 + MIR SINE MIR 106 172 -90 2386 143 3 3 chr2 150273005 150273369 -100414485 - THE1B LTR MaLR 0 364 1 323 287 53 47 chr2 150273369 150273450 -100414404 + MIR SINE MIR 172 256 -6 31 68 0 0 chr2 150273731 150273790 -100414064 + AT_rich Low_complexity Low_complexity 1 59 0 23 0 0 0 chr2 150275784 150275807 -100412047 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 150276335 150276374 -100411480 + AT_rich Low_complexity Low_complexity 1 39 0 1015 48 0 0 chr2 150278430 150278555 -100409299 + L1PA3 LINE L1 6025 6149 -6 304 264 103 11 chr2 150278593 150278680 -100409174 - L2 LINE L2 -30 3242 3148 25 51 0 0 chr2 150279008 150279047 -100408807 + AT_rich Low_complexity Low_complexity 1 39 0 202 321 0 0 chr2 150279188 150279244 -100408610 - MIR SINE MIR -16 246 191 1241 102 5 20 chr2 150279244 150279440 -100408414 - MER51C LTR ERV1 0 640 448 4796 206 107 90 chr2 150279452 150281167 -100406687 - MER52A LTR ERV1 -11 1744 1 2782 133 26 2 chr2 150281167 150281628 -100406226 - MER51C LTR ERV1 -188 452 1 365 333 83 0 chr2 150281632 150281776 -100406078 - MIR SINE MIR -70 192 37 21 82 0 0 chr2 150283581 150283630 -100404224 + AT_rich Low_complexity Low_complexity 1 49 0 23 33 0 0 chr2 150284403 150284433 -100403421 + AT_rich Low_complexity Low_complexity 1 30 0 201 74 0 0 chr2 150285605 150285632 -100402222 + (CA)n Simple_repeat Simple_repeat 2 28 0 25 31 0 0 chr2 150286348 150286380 -100401474 + AT_rich Low_complexity Low_complexity 1 32 0 430 276 43 73 chr2 150286428 150286702 -100401152 + L1MEc LINE L1 966 1247 -5149 1979 126 11 0 chr2 150286702 150287031 -100400823 + AluSx SINE Alu 1 332 0 430 276 43 73 chr2 150287031 150287479 -100400375 + L1MEc LINE L1 1247 1667 -4729 441 291 93 37 chr2 150287563 150287831 -100400023 + L1MEc LINE L1 1954 2236 -4160 338 301 128 13 chr2 150287837 150288213 -100399641 + L1MEc LINE L1 2203 2621 -3594 821 275 37 44 chr2 150288291 150288586 -100399268 - L2 LINE L2 -9 3304 3012 264 200 0 0 chr2 150289688 150289733 -100398121 - L1 LINE L1 -1243 4903 4859 2779 193 24 11 chr2 150291065 150291608 -100396246 - L1MB1 LINE L1 -141 6263 5714 7966 211 27 11 chr2 150291647 150293554 -100394300 - L1MB1 LINE L1 -776 5606 3671 247 192 39 26 chr2 150293608 150293686 -100394168 - L1 LINE L1 -964 5182 5104 2379 247 72 9 chr2 150293697 150294718 -100393136 - L1MB1 LINE L1 -4516 1787 802 393 286 19 56 chr2 150294720 150294881 -100392973 - L1MB1 LINE L1 -5380 923 769 515 252 46 14 chr2 150494903 150495121 -100192733 + L1MCa LINE L1 1743 1967 -4459 1325 228 27 20 chr2 150495123 150495562 -100192292 + L1MCa LINE L1 2117 2558 -4049 1987 119 0 61 chr2 150495573 150495900 -100191954 + AluSx SINE Alu 1 307 -5 36 82 0 0 chr2 150495943 150496028 -100191826 + AT_rich Low_complexity Low_complexity 1 85 0 321 298 19 10 chr2 150496118 150496222 -100191632 - MIR SINE MIR -121 141 37 741 221 0 0 chr2 150497346 150497495 -100190359 + AluJb SINE Alu 5 153 -159 229 136 0 61 chr2 150497495 150497561 -100190293 - AluJb SINE Alu -166 136 75 1011 136 0 0 chr2 150497564 150497711 -100190143 + AluSg/x SINE Alu 150 296 -16 867 248 33 19 chr2 150497713 150497927 -100189927 + MIR SINE MIR 25 241 -21 7005 54 17 3 chr2 150500013 150501536 -100186318 - L1PA7 LINE L1 -4 6150 4617 218 0 45 45 chr2 150502218 150502262 -100185592 + (CTATA)n Simple_repeat Simple_repeat 2 45 0 258 220 0 0 chr2 150502292 150502351 -100185503 + (TA)n Simple_repeat Simple_repeat 1 59 0 2199 125 0 10 chr2 150502352 150502665 -100185189 - AluSg SINE Alu 0 310 1 512 344 36 0 chr2 150502669 150502864 -100184990 - MIR SINE MIR -11 251 50 207 250 179 83 chr2 150502884 150502968 -100184886 + L2 LINE L2 3162 3253 -19 204 235 49 62 chr2 150503067 150503148 -100184706 - L2 LINE L2 -1 3312 3233 6476 148 41 14 chr2 150503796 150504980 -100182874 + Tigger3b DNA MER2_type 15 1231 0 545 347 53 21 chr2 150505146 150505524 -100182330 - L2 LINE L2 -1228 2086 1697 225 0 0 0 chr2 150505870 150505895 -100181959 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 5616 41 1 3 chr2 150505895 150506582 -100181272 - L1PA3 LINE L1 -10 6145 5460 3081 119 64 68 chr2 150506684 150507800 -100180054 + pTR5 LTR ERV1 809 2295 -143 785 279 57 27 chr2 150507814 150508243 -100179611 + L2 LINE L2 2058 2557 -757 279 211 56 0 chr2 150508305 150508376 -100179478 + MLT1J LTR MaLR 43 117 -394 811 214 24 9 chr2 150508377 150508587 -100179267 + MLT2B3 LTR ERVL 1 213 -341 222 114 45 23 chr2 150508608 150508652 -100179202 + CT-rich Low_complexity Low_complexity 4 48 0 917 231 5 23 chr2 150508652 150508873 -100178981 + MLT2B3 LTR ERVL 223 439 -115 673 142 0 93 chr2 150508879 150509041 -100178813 + MLT2A2 LTR ERVL 307 453 0 316 260 0 0 chr2 150509041 150509114 -100178740 + MLT1J LTR MaLR 114 186 -325 184 308 65 37 chr2 150509369 150509476 -100178378 - MIR SINE MIR -21 241 132 1547 163 129 15 chr2 150509730 150510056 -100177798 - MLT1A1 LTR MaLR -2 363 1 2074 97 0 0 chr2 150510723 150510991 -100176863 - AluY SINE Alu -1 310 43 414 309 11 32 chr2 150512272 150512591 -100175263 + CT-rich Low_complexity Low_complexity 1 312 0 23274 124 8 29 chr2 150512901 150513276 -100174578 - L1P3 LINE L1 -1536 4925 4544 1976 107 57 4 chr2 150513276 150513557 -100174297 - AluY SINE Alu -15 296 1 23274 124 8 29 chr2 150513557 150517677 -100170177 - L1P3 LINE L1 -1917 4544 434 1494 134 33 65 chr2 150518765 150519071 -100168783 + AluSx SINE Alu 1 296 -16 8684 24 1 1 chr2 150519306 150520514 -100167340 - L1P1 LINE L1 -646 5509 4301 1589 125 97 28 chr2 150521504 150521792 -100166062 - AluSx SINE Alu -4 308 1 478 133 0 0 chr2 150521805 150521880 -100165974 - AluS SINE Alu -238 75 1 25 31 0 0 chr2 150521885 150521917 -100165937 + AT_rich Low_complexity Low_complexity 1 32 0 2216 73 0 0 chr2 150522742 150523016 -100164838 + AluY SINE Alu 1 274 -37 246 32 0 0 chr2 150523168 150523199 -100164655 + (TG)n Simple_repeat Simple_repeat 2 32 0 342 0 0 0 chr2 150523696 150523734 -100164120 + (CA)n Simple_repeat Simple_repeat 2 39 0 254 292 0 0 chr2 150524087 150524158 -100163696 - MIR SINE MIR -63 145 94 224 328 112 17 chr2 150524546 150524662 -100163192 + L2 LINE L2 3168 3294 -19 246 240 72 40 chr2 150524866 150524991 -100162863 - L3 LINE CR1 -697 880 752 686 287 101 0 chr2 150525144 150525381 -100162473 + MIR SINE MIR 2 262 0 368 277 34 103 chr2 150526715 150527007 -100160847 + MLT1J LTR MaLR 137 408 -103 2066 155 35 16 chr2 150527009 150527377 -100160477 + THE1C LTR MaLR 1 375 0 232 292 68 21 chr2 150530424 150530616 -100157238 - HAL1b LINE L1 -442 906 706 22 0 0 0 chr2 150530969 150530991 -100156863 + AT_rich Low_complexity Low_complexity 1 22 0 638 258 59 5 chr2 150531435 150531621 -100156233 - MIR SINE MIR -12 250 55 1561 196 82 6 chr2 150532038 150532369 -100155485 + MLT1A1 LTR MaLR 4 359 -6 691 252 62 44 chr2 150532375 150532601 -100155253 - MIR SINE MIR -22 240 11 262 238 0 48 chr2 150533064 150533127 -100154727 + MER5A DNA MER1_type 9 68 -121 1831 135 23 40 chr2 150533127 150533431 -100154423 + AluSx SINE Alu 1 299 -13 823 112 5 43 chr2 150533433 150533620 -100154234 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 1170 218 40 48 chr2 150534010 150534409 -100153445 - MER66A LTR ERV1 -54 424 29 252 261 80 0 chr2 150534573 150534661 -100153193 + MIR SINE MIR 131 225 -37 422 263 171 19 chr2 150534720 150534925 -100152929 - MIR SINE MIR -15 247 12 2336 98 3 0 chr2 150534962 150535269 -100152585 + AluSg SINE Alu 1 308 -2 23 33 0 0 chr2 150535752 150535782 -100152072 + AT_rich Low_complexity Low_complexity 1 30 0 2218 109 0 28 chr2 150536031 150536351 -100151503 + AluSq SINE Alu 3 313 0 209 209 0 0 chr2 150536807 150536850 -100151004 - L2 LINE L2 -4 3309 3267 * 307 274 88 0 chr2 150536840 150536953 -100150901 + MIR SINE MIR 131 253 -9 21 36 0 0 chr2 150537177 150537205 -100150649 + AT_rich Low_complexity Low_complexity 1 28 0 264 430 23 0 chr2 150539806 150539934 -100147920 - L2 LINE L2 -1 3271 3141 250 250 136 15 chr2 150540319 150540451 -100147403 - MLT1L LTR MaLR -436 179 32 413 231 133 63 chr2 150540564 150540707 -100147147 - MER5A DNA MER1_type -1 188 36 185 152 130 0 chr2 150541339 150541385 -100146469 - MIR SINE MIR -28 234 183 1600 197 7 23 chr2 150541418 150541723 -100146131 - AluJo SINE Alu -12 300 1 1535 197 42 14 chr2 150541776 150542131 -100145723 + MLT1A1 LTR MaLR 1 365 0 226 293 76 85 chr2 150542169 150542505 -100145349 + L2 LINE L2 2712 3052 -220 1173 202 24 17 chr2 150546508 150546795 -100141059 + MLT2D LTR ERVL 1 289 -125 645 286 50 6 chr2 150547594 150547816 -100140038 - MIR SINE MIR -34 228 1 520 159 0 23 chr2 150548970 150549058 -100138796 + FRAM SINE Alu 34 119 -57 524 300 12 18 chr2 150550934 150551104 -100136750 + MER5B DNA MER1_type 2 170 -8 500 252 25 0 chr2 150551901 150552036 -100135818 - MIR SINE MIR -10 252 115 285 344 49 7 chr2 150553709 150553863 -100133991 + MIR SINE MIR 32 192 -70 36 77 0 0 chr2 150554257 150554335 -100133519 + AT_rich Low_complexity Low_complexity 1 78 0 614 283 114 25 chr2 150554525 150554588 -100133266 - L1ME3A LINE L1 -203 5967 5911 234 91 0 0 chr2 150554588 150554621 -100133233 + (TA)n Simple_repeat Simple_repeat 1 33 0 614 283 114 25 chr2 150554621 150554953 -100132901 - L1ME3A LINE L1 -259 5911 5537 1161 131 22 77 chr2 150555016 150555238 -100132616 - AluJo SINE Alu -15 297 88 1542 185 56 60 chr2 150555402 150555867 -100131987 - MLT1C LTR MaLR -4 463 1 310 231 171 0 chr2 150556900 150556940 -100130914 - L1MA10 LINE L1 -4 6330 6291 1844 266 64 28 chr2 150556940 150557693 -100130161 - L1ME1 LINE L1 -53 6113 5334 3089 122 10 14 chr2 150557701 150558218 -100129636 + L1MC1 LINE L1 5695 6209 -124 360 155 0 0 chr2 150558255 150558326 -100129528 + CT-rich Low_complexity Low_complexity 3 73 0 210 162 0 0 chr2 150558400 150558437 -100129417 + T-rich Low_complexity Low_complexity 2 38 0 594 87 0 58 chr2 150558538 150558642 -100129212 - L1MC1 LINE L1 0 6333 6236 1040 238 34 13 chr2 150558644 150559027 -100128827 - L1ME1 LINE L1 -797 5349 4959 497 139 52 26 chr2 150559073 150559188 -100128666 - L1MC3 LINE L1 -1163 6622 6505 286 268 24 8 chr2 150559242 150559369 -100128485 - L1ME1 LINE L1 -2648 3498 3370 330 284 122 5 chr2 150560024 150560246 -100127608 - L1MC3 LINE L1 -1875 5933 5686 594 297 44 22 chr2 150560364 150560684 -100127170 - L1MC3 LINE L1 -2175 5633 5307 611 294 44 22 chr2 150562555 150562875 -100124979 - L1MC/D LINE L1 -2175 5633 5307 180 111 0 0 chr2 150564452 150564479 -100123375 + (T)n Simple_repeat Simple_repeat 1 27 0 611 184 24 8 chr2 150564705 150564830 -100123024 + L2 LINE L2 3187 3313 0 352 250 27 54 chr2 150564907 150564992 -100122862 - MLT1G1 LTR MaLR -14 528 447 4348 119 14 48 chr2 150564992 150565707 -100122147 + LTR8 LTR ERV1 1 691 0 352 250 27 54 chr2 150565707 150565769 -100122085 - MLT1G1 LTR MaLR -95 447 385 4132 142 22 27 chr2 150565772 150566503 -100121351 + LTR8A LTR ERV1 1 727 0 876 243 42 57 chr2 150566523 150566856 -100120998 - MLT1G1 LTR MaLR -279 299 1 449 263 65 23 chr2 150568015 150568187 -100119667 + MIR SINE MIR 3 174 -62 478 282 146 5 chr2 150569795 150570008 -100117846 + MIR SINE MIR 8 250 -12 319 303 41 25 chr2 150570163 150570285 -100117569 + L2 LINE L2 3190 3313 0 21 36 0 0 chr2 150570416 150570444 -100117410 + AT_rich Low_complexity Low_complexity 1 28 0 780 262 22 22 chr2 150571691 150571920 -100115934 - MIR SINE MIR -1 261 33 189 0 0 0 chr2 150572016 150572037 -100115817 + (T)n Simple_repeat Simple_repeat 1 21 0 356 347 36 5 chr2 150573647 150573843 -100114011 + L2 LINE L2 2252 2453 -861 290 259 148 0 chr2 150573894 150574002 -100113852 - L1ME3 LINE L1 -30 6132 6009 342 304 155 38 chr2 150574035 150574351 -100113503 + L2 LINE L2 2519 2871 -443 386 323 92 41 chr2 150574534 150574850 -100113004 + L2 LINE L2 2982 3313 0 612 302 28 12 chr2 150576596 150576851 -100111003 - MIR SINE MIR -1 261 3 379 272 161 50 chr2 150577010 150577190 -100110664 + MIR3 SINE MIR 2 201 -7 234 257 81 14 chr2 150578379 150578453 -100109401 + MIR3 SINE MIR 97 175 -33 22 0 0 0 chr2 150579356 150579378 -100108476 + AT_rich Low_complexity Low_complexity 1 22 0 2235 80 0 48 chr2 150579488 150579799 -100108055 + AluSg SINE Alu 1 296 -14 255 31 0 0 chr2 150582451 150582483 -100105371 + (CA)n Simple_repeat Simple_repeat 1 32 0 365 212 66 44 chr2 150582636 150582773 -100105081 - L1ME4a LINE L1 -2 6119 5980 279 196 72 52 chr2 150582988 150583085 -100104769 - MIR SINE MIR -45 217 119 252 335 58 13 chr2 150583466 150583621 -100104233 + MER5A DNA MER1_type 7 168 -21 2589 116 6 3 chr2 150583747 150584110 -100103744 + THE1B LTR MaLR 1 364 0 541 191 95 54 chr2 150584738 150584906 -100102948 - Charlie8 DNA MER1_type -2204 213 39 34 0 0 0 chr2 150585453 150585487 -100102367 + AT_rich Low_complexity Low_complexity 1 34 0 255 208 16 40 chr2 150586343 150586468 -100101386 + A-rich Low_complexity Low_complexity 4 125 0 290 214 114 0 chr2 150587838 150587908 -100099946 - L2 LINE L2 -4 3309 3232 21 0 0 0 chr2 150589469 150589490 -100098364 + AT_rich Low_complexity Low_complexity 1 21 0 2303 107 0 3 chr2 150589987 150590296 -100097558 + AluSg SINE Alu 1 308 -2 252 0 0 0 chr2 150590829 150590857 -100096997 + (A)n Simple_repeat Simple_repeat 1 28 0 327 85 0 0 chr2 150592950 150592997 -100094857 + (CA)n Simple_repeat Simple_repeat 1 47 0 543 147 119 9 chr2 150593186 150593295 -100094559 - LTR8A LTR ERV1 -606 121 1 374 198 10 31 chr2 150593295 150593391 -100094463 - L1MD3 LINE L1 -511 7484 7391 266 224 0 17 chr2 150593391 150593449 -100094405 - MLT1F1 LTR MaLR -456 111 55 715 139 28 67 chr2 150593479 150593659 -100094195 - L1MC3 LINE L1 -699 7086 6914 2158 70 7 34 chr2 150593769 150594067 -100093787 - AluY SINE Alu -19 292 3 3435 57 2 18 chr2 150594173 150594628 -100093226 - LTR7 LTR ERV1 -2 448 1 2280 80 59 13 chr2 150594628 150595001 -100092853 - HERVH LTR ERV1 0 7713 7324 1270 143 19 0 chr2 150595001 150595217 -100092637 - HERVH LTR ERV1 -1894 5819 5600 4408 114 0 3 chr2 150595218 150595882 -100091972 - HERVH LTR ERV1 -2564 5149 4488 5588 96 6 2 chr2 150595883 150596735 -100091119 - HERVH LTR ERV1 -3719 3994 3140 * 14015 109 15 22 chr2 150596714 150599556 -100088298 - HERVH LTR ERV1 -4718 2995 1 3378 51 7 18 chr2 150599558 150600011 -100087843 - LTR7 LTR ERV1 -2 448 1 369 0 0 0 chr2 150600772 150600813 -100087041 + (CA)n Simple_repeat Simple_repeat 1 41 0 25 0 0 0 chr2 150600973 150600998 -100086856 + AT_rich Low_complexity Low_complexity 1 25 0 706 254 47 54 chr2 150601123 150601399 -100086455 - MER34 LTR ERV1 -268 274 1 317 239 69 62 chr2 150601453 150601583 -100086271 + L2 LINE L2 3177 3307 -6 264 326 0 0 chr2 150603009 150603095 -100084759 + GA-rich Low_complexity Low_complexity 1 86 0 189 340 0 0 chr2 150604048 150604098 -100083756 - MER5A DNA MER1_type -79 110 61 271 61 61 0 chr2 150604385 150604434 -100083420 + CT-rich Low_complexity Low_complexity 3 54 0 292 294 15 0 chr2 150605867 150605935 -100081919 + tRNA-Ile-ATT tRNA tRNA 6 74 -3 977 237 31 46 chr2 150606084 150606409 -100081445 + L2 LINE L2 2539 2858 -456 24 67 0 0 chr2 150606618 150606663 -100081191 + AT_rich Low_complexity Low_complexity 1 45 0 5740 104 40 0 chr2 150606961 150607755 -100080099 + LTR12 LTR ERV1 1 826 0 653 263 5 39 chr2 150607816 150608021 -100079833 - L2 LINE L2 0 3313 3116 22 35 0 0 chr2 150608190 150608219 -100079635 + AT_rich Low_complexity Low_complexity 1 29 0 197 105 0 26 chr2 150608687 150608725 -100079129 + (TAAAAA)n Simple_repeat Simple_repeat 4 40 0 21 0 0 0 chr2 150608858 150608879 -100078975 + AT_rich Low_complexity Low_complexity 1 21 0 2125 111 0 7 chr2 150608925 150609231 -100078623 - AluY SINE Alu 0 311 8 376 248 110 75 chr2 150609906 150610241 -100077613 - L1ME4a LINE L1 -117 6004 5658 25 75 0 0 chr2 150610806 150610859 -100076995 + AT_rich Low_complexity Low_complexity 1 53 0 862 225 0 22 chr2 150610868 150611046 -100076808 - FAM SINE Alu -1 174 1 1996 149 3 10 chr2 150613373 150613674 -100074180 + AluSq SINE Alu 1 299 -14 315 367 17 0 chr2 150614247 150614367 -100073487 - MIR SINE MIR -80 182 61 342 320 63 45 chr2 150614819 150615197 -100072657 + MARNA DNA Mariner 132 516 -70 1879 135 68 0 chr2 150615246 150615527 -100072327 + AluSx SINE Alu 3 302 -10 1477 216 10 0 chr2 150615636 150615933 -100071921 - AluJo SINE Alu -12 300 1 1522 266 44 11 chr2 150615984 150616521 -100071333 - L1ME3 LINE L1 -47 6115 5544 23 68 0 0 chr2 150616573 150616617 -100071237 + AT_rich Low_complexity Low_complexity 1 44 0 2451 68 0 10 chr2 150618214 150618522 -100069332 - AluY SINE Alu -6 305 1 312 246 35 44 chr2 150618854 150618968 -100068886 + LTR16C LTR ERVL 316 428 -63 5709 157 34 10 chr2 150618974 150620490 -100067364 + L1MA8 LINE L1 4738 6291 0 618 313 82 34 chr2 150620806 150621221 -100066633 + ERVL LTR ERVL 3362 3796 -1968 2513 65 0 7 chr2 150623078 150623386 -100064468 + AluY SINE Alu 1 306 -5 289 230 80 40 chr2 150623931 150624031 -100063823 - MER5A DNA MER1_type -77 112 9 284 182 0 0 chr2 150624150 150624205 -100063649 - MLT2B1 LTR ERVL -8 512 458 391 216 12 0 chr2 150624222 150624384 -100063470 + (TA)n Simple_repeat Simple_repeat 1 164 0 430 299 67 37 chr2 150624388 150624680 -100063174 + L1ME LINE L1 5493 5793 -359 501 349 32 21 chr2 150624800 150625138 -100062716 - L1MC/D LINE L1 -2048 5760 5419 238 267 90 32 chr2 150625194 150625595 -100062259 - L1MC/D LINE L1 -817 5329 4906 625 215 35 43 chr2 150625868 150626094 -100061760 + MER106B DNA MER1_type 6 1058 -1 467 324 97 35 chr2 150626223 150626420 -100061434 - L1MC/D LINE L1 -1721 4425 4242 2400 82 0 3 chr2 150626420 150626724 -100061130 + AluY SINE Alu 1 303 -8 467 324 97 35 chr2 150626724 150626897 -100060957 - L1MC/D LINE L1 -1904 4242 4032 342 263 116 56 chr2 150626951 150627236 -100060618 - L1MC/D LINE L1 -2216 3930 3629 2134 129 6 10 chr2 150627273 150627584 -100060270 - AluSx SINE Alu 0 312 3 314 257 80 43 chr2 150627967 150628154 -100059700 - L1MC/D LINE L1 -2877 3269 3076 2318 91 7 0 chr2 150628731 150629038 -100058816 - AluSg SINE Alu -1 309 1 182 405 8 23 chr2 150629209 150629340 -100058514 - L2 LINE L2 0 3313 3185 332 266 44 70 chr2 150630624 150630782 -100057072 + MLT1H LTR MaLR 1 154 -395 364 147 53 13 chr2 150630988 150631063 -100056791 + MLT1G1 LTR MaLR 500 577 -18 6171 150 34 18 chr2 150631623 150632616 -100055238 - L1MA4A LINE L1 -5 6298 5323 2137 121 0 0 chr2 150632616 150632913 -100054941 - AluSx SINE Alu -4 308 12 6171 150 34 18 chr2 150632913 150633795 -100054059 - L1MA4A LINE L1 -980 5323 4381 180 0 0 0 chr2 150633795 150633815 -100054039 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 6171 150 34 18 chr2 150633815 150634032 -100053822 - L1MA4A LINE L1 -1922 4381 4169 21 57 0 0 chr2 150634219 150634254 -100053600 + AT_rich Low_complexity Low_complexity 1 35 0 7190 54 0 1 chr2 150634261 150635459 -100052395 + L1PA6 LINE L1 4958 6154 0 478 175 91 7 chr2 150635463 150635606 -100052248 + Charlie5 DNA MER1_type 2374 2528 -84 268 310 0 11 chr2 150635891 150635978 -100051876 - MIR SINE MIR 0 262 177 610 278 17 28 chr2 150636069 150636249 -100051605 + MER5B DNA MER1_type 1 178 0 1405 197 51 25 chr2 150636892 150637342 -100050512 + MLT2B1 LTR ERVL 6 520 0 218 286 82 6 chr2 150637519 150637592 -100050262 + MIR SINE MIR 8 147 -61 4728 172 18 33 chr2 150637604 150638581 -100049273 - L1MA8 LINE L1 0 6291 5329 7360 194 13 6 chr2 150638591 150641036 -100046818 - L1PA16 LINE L1 -95 6071 3613 228 188 0 0 chr2 150641038 150641086 -100046768 + L1 LINE L1 2562 2609 -3537 1440 298 79 17 chr2 150641092 150642331 -100045523 - L1M2 LINE L1 -4338 2830 1534 258 374 11 0 chr2 150643316 150643407 -100044447 - L2 LINE L2 -19 3253 3162 203 327 78 52 chr2 150643674 150643827 -100044027 + MIR SINE MIR 58 214 -48 1196 227 41 38 chr2 150644521 150644812 -100043042 + AluJo SINE Alu 2 293 -9 1612 174 56 16 chr2 150644830 150645260 -100042594 + L1M4 LINE L1 5189 5641 -543 1163 228 45 35 chr2 150645485 150645774 -100042080 + AluJo SINE Alu 2 293 -9 4287 167 46 15 chr2 150645792 150646739 -100041115 + L1MB7 LINE L1 5189 6165 -19 676 272 60 43 chr2 150648656 150648891 -100038963 - MIR SINE MIR -21 241 3 182 37 37 0 chr2 150650754 150650781 -100037073 + (TC)n Simple_repeat Simple_repeat 2 29 0 414 0 0 0 chr2 150650788 150650834 -100037020 + (CA)n Simple_repeat Simple_repeat 1 46 0 686 223 59 59 chr2 150651157 150651359 -100036495 - MIR SINE MIR -34 228 27 2252 87 0 10 chr2 150651764 150652064 -100035790 + AluY SINE Alu 1 297 -14 333 0 0 0 chr2 150652068 150652105 -100035749 + (CA)n Simple_repeat Simple_repeat 2 38 0 215 338 13 0 chr2 150652298 150652375 -100035479 - L3 LINE CR1 -147 1430 1353 189 250 71 0 chr2 150652377 150652433 -100035421 + MIR SINE MIR 203 262 0 2071 121 4 0 chr2 150653788 150654115 -100033739 - AluSg SINE Alu 0 328 1 466 270 77 30 chr2 150654133 150654331 -100033523 - MIR SINE MIR 0 262 52 778 233 11 16 chr2 150654420 150654609 -100033245 + MER3 DNA MER1_type 19 206 -3 310 236 14 0 chr2 150655136 150655208 -100032646 - MIR SINE MIR -70 192 120 1191 52 0 7 chr2 150656456 150656611 -100031243 - AluY SINE Alu -1 310 157 201 213 21 0 chr2 150657786 150657833 -100030021 + (TTA)n Simple_repeat Simple_repeat 3 50 0 1950 124 147 21 chr2 150658021 150658202 -100029652 - MSTA LTR MaLR 0 428 271 399 41 0 0 chr2 150658202 150658251 -100029603 + (GA)n Simple_repeat Simple_repeat 2 50 0 1950 124 147 21 chr2 150658251 150658449 -100029405 - MSTA LTR MaLR -157 271 1 2553 117 3 11 chr2 150658579 150658946 -100028908 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr2 150659007 150659035 -100028819 + AT_rich Low_complexity Low_complexity 1 28 0 264 198 55 66 chr2 150659736 150659827 -100028027 - Charlie7 DNA MER1_type -2515 97 8 767 277 24 0 chr2 150660651 150660864 -100026990 + L1ME2 LINE L1 5938 6155 -9 1997 271 70 8 chr2 150661486 150662247 -100025607 + L1ME3A LINE L1 5297 6104 -66 24 32 0 0 chr2 150662573 150662604 -100025250 + AT_rich Low_complexity Low_complexity 1 31 0 3304 168 75 49 chr2 150663071 150663565 -100024289 - LTR48 LTR ERV1 -1 786 264 3524 102 12 0 chr2 150663565 150664073 -100023781 + MER75 DNA T2_type 1 514 0 3304 168 75 49 chr2 150664073 150664333 -100023521 - LTR48 LTR ERV1 -523 264 12 22 0 0 0 chr2 150666093 150666115 -100021739 + AT_rich Low_complexity Low_complexity 1 22 0 209 209 114 0 chr2 150667241 150667285 -100020569 - MIR SINE MIR -65 143 96 629 224 107 68 chr2 150669326 150669607 -100018247 + L1ME3A LINE L1 5879 6170 0 196 340 19 29 chr2 150670188 150670291 -100017563 - L3 LINE CR1 -188 1389 1288 341 291 57 57 chr2 150670294 150670469 -100017385 - MER5B DNA MER1_type 0 178 4 479 384 73 9 chr2 150670491 150670832 -100017022 - L3 LINE CR1 -324 1253 891 211 322 144 0 chr2 150670899 150670989 -100016865 - L2 LINE L2 -53 3219 3117 416 264 124 8 chr2 150671828 150671957 -100015897 - L3 LINE CR1 -760 817 674 28 29 0 0 chr2 150672117 150672152 -100015702 + AT_rich Low_complexity Low_complexity 1 35 0 1676 280 92 39 chr2 150672383 150673473 -100014381 - L1M4 LINE L1 -940 5206 4060 10069 235 41 27 chr2 150673517 150674932 -100012922 - L1PBb LINE L1 -1389 5459 4066 2476 27 41 0 chr2 150674932 150675226 -100012628 + AluY SINE Alu 1 306 -5 10069 235 41 27 chr2 150675226 150677727 -100010127 - L1PBb LINE L1 -2782 4066 1427 306 325 118 39 chr2 150678450 150678730 -100009124 - L1PBb LINE L1 -6539 310 9 340 294 80 59 chr2 150678743 150678930 -100008924 - L1MEd LINE L1 -5287 832 642 317 290 40 24 chr2 150679271 150679395 -100008459 - L1MEd LINE L1 -5943 176 51 209 263 100 0 chr2 150679406 150679486 -100008368 - L3 LINE CR1 -1080 497 410 337 248 8 66 chr2 150680130 150680251 -100007603 - MER97a DNA MER1_type? -732 162 49 242 211 88 79 chr2 150680580 150680694 -100007160 + MIR SINE MIR 103 217 -45 949 80 0 22 chr2 150680951 150681089 -100006765 + AluSp/q SINE Alu 179 313 0 423 0 0 0 chr2 150681760 150681807 -100006047 + (TG)n Simple_repeat Simple_repeat 2 48 0 975 341 131 35 chr2 150682932 150684322 -100003532 + L2 LINE L2 1744 3260 -12 180 111 0 0 chr2 150684599 150684626 -100003228 + (ATG)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr2 150685759 150685782 -100002072 + AT_rich Low_complexity Low_complexity 1 23 0 820 255 11 5 chr2 150686688 150686914 -100000940 + MIR SINE MIR 26 252 -10 195 42 0 0 chr2 150687259 150687283 -100000571 + (TTG)n Simple_repeat Simple_repeat 2 25 0 31 18 0 53 chr2 150687547 150687604 -100000250 + AT_rich Low_complexity Low_complexity 1 54 0 528 250 64 37 chr2 150687664 150687852 -100000002 + MIR SINE MIR 44 236 -26 414 136 58 0 chr2 150688147 150688302 -99999552 + (TA)n Simple_repeat Simple_repeat 2 165 0 371 118 69 0 chr2 150688475 150688619 -99999235 + (TA)n Simple_repeat Simple_repeat 1 154 0 264 298 117 11 chr2 150688957 150689051 -99998803 + MIR SINE MIR 14 117 -145 186 227 61 15 chr2 150689106 150689172 -99998682 + MIR SINE MIR 193 261 -1 1252 213 71 41 chr2 150692140 150692534 -99995320 - MER96B DNA MER1_type? -1 416 11 223 414 16 0 chr2 150693147 150693275 -99994579 + MIR3 SINE MIR 64 193 -15 1771 193 94 13 chr2 150695069 150695462 -99992392 + MSTB1 LTR MaLR 8 432 0 215 202 180 56 chr2 150695521 150695610 -99992244 + MIR SINE MIR 82 181 -81 375 216 11 11 chr2 150695723 150695811 -99992043 - LTR33A LTR ERVL -2 521 434 1259 206 63 129 chr2 150696367 150696809 -99991045 + MLT2B1 LTR ERVL 1 413 -1 340 298 12 53 chr2 150697355 150697526 -99990328 + HAL1b LINE L1 747 910 -438 239 267 57 9 chr2 150697614 150697719 -99990135 + HAL1 LINE L1 2226 2335 -172 27 0 0 0 chr2 150697793 150697820 -99990034 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr2 150697876 150697900 -99989954 + AT_rich Low_complexity Low_complexity 1 24 0 248 277 59 67 chr2 150699751 150699870 -99987984 - MIR SINE MIR -67 141 24 23 33 0 0 chr2 150699913 150699943 -99987911 + AT_rich Low_complexity Low_complexity 1 30 0 7633 23 6 0 chr2 150701417 150702672 -99985182 - L1PA4 LINE L1 0 6155 4897 457 327 46 30 chr2 150704932 150705141 -99982713 - MIR SINE MIR -51 211 3 513 329 25 43 chr2 150705639 150705916 -99981938 - MLT1I LTR MaLR -47 362 91 1981 151 0 0 chr2 150706601 150706906 -99980948 - AluSx SINE Alu 0 305 1 252 328 0 0 chr2 150708593 150708657 -99979197 - MIR3 SINE MIR -28 180 117 21 0 0 0 chr2 150709482 150709503 -99978351 + AT_rich Low_complexity Low_complexity 1 21 0 604 85 54 27 chr2 150711417 150711751 -99976103 + (TA)n Simple_repeat Simple_repeat 1 343 0 2128 236 58 79 chr2 150712070 150712582 -99975272 - L1MC4 LINE L1 0 8042 7520 1556 163 0 83 chr2 150712582 150712883 -99974971 - AluJb SINE Alu -36 276 1 2128 236 58 79 chr2 150712883 150713249 -99974605 - L1MC4 LINE L1 -522 7520 7188 5846 111 12 8 chr2 150713249 150714901 -99972953 - L1PA13 LINE L1 0 6163 4497 2128 236 58 79 chr2 150714901 150715081 -99972773 - L1MC4 LINE L1 -854 7188 7006 1884 213 107 21 chr2 150716061 150716587 -99971267 - L1ME3A LINE L1 -62 6108 5538 371 22 0 0 chr2 150716771 150716817 -99971037 + L1PA6 LINE L1 6104 6149 -5 1248 219 123 19 chr2 150719133 150719584 -99968270 + MER39 LTR ERV1 6 707 0 225 259 35 0 chr2 150720390 150720448 -99967406 + MIR3 SINE MIR 144 203 -5 206 144 52 121 chr2 150721282 150721456 -99966398 + (ATTAG)n Simple_repeat Simple_repeat 4 165 0 969 202 22 44 chr2 150721487 150721715 -99966139 + MER58A DNA MER1_type 1 223 -1 385 153 0 0 chr2 150723068 150723127 -99964727 + MER34C LTR ERV1 36 94 -491 554 331 73 63 chr2 150723149 150723590 -99964264 - L2 LINE L2 -4 3268 2824 271 331 29 46 chr2 150723812 150723987 -99963867 + MIR SINE MIR 3 174 -88 206 204 23 23 chr2 150723967 150724011 -99963843 + L2 LINE L2 3210 3253 -19 * 1318 194 90 56 chr2 150725348 150725725 -99962129 - MLT1B LTR MaLR 0 390 1 27 29 0 0 chr2 150725854 150725888 -99961966 + AT_rich Low_complexity Low_complexity 1 34 0 2364 73 0 7 chr2 150726583 150726884 -99960970 + AluY SINE Alu 1 299 -12 23 54 0 0 chr2 150727120 150727157 -99960697 + AT_rich Low_complexity Low_complexity 1 37 0 445 320 89 38 chr2 150727252 150727568 -99960286 - L1ME4a LINE L1 -105 6016 5685 198 103 0 0 chr2 150727587 150727616 -99960238 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 234 0 0 0 chr2 150727615 150727641 -99960213 + (GA)n Simple_repeat Simple_repeat 2 27 0 4331 147 48 10 chr2 150727641 150728433 -99959421 - Tigger3b DNA MER2_type -3 1228 407 29224 114 9 22 chr2 150728484 150729165 -99958689 - L1PA7 LINE L1 0 6469 5781 2361 89 23 0 chr2 150729165 150729467 -99958387 - AluY SINE Alu 0 311 3 29224 114 9 22 chr2 150729467 150734561 -99953293 - L1PA7 LINE L1 -688 5781 742 2294 187 12 0 chr2 150734561 150734978 -99952876 - Tigger3b DNA MER2_type -808 423 2 274 80 40 0 chr2 150735007 150735057 -99952797 + (TCTA)n Simple_repeat Simple_repeat 4 55 0 1723 185 91 67 chr2 150735157 150735650 -99952204 + L1MC3 LINE L1 5442 5946 -1839 2172 190 75 15 chr2 150735684 150736163 -99951691 + L1MC3 LINE L1 7070 7577 -208 299 315 37 56 chr2 150736598 150736760 -99951094 - MIR SINE MIR -68 194 36 25 31 0 0 chr2 150736790 150736822 -99951032 + AT_rich Low_complexity Low_complexity 1 32 0 272 291 20 34 chr2 150737112 150737260 -99950594 - L1ME LINE L1 -305 5865 5720 240 272 76 85 chr2 150739271 150739587 -99948267 + L1ME4a LINE L1 5774 6086 -35 16913 41 4 1 chr2 150740628 150743491 -99944363 - L1PA4 LINE L1 -6 6149 3284 25003 66 11 1 chr2 150745034 150748328 -99939526 - L1PA4 LINE L1 -2819 3327 1 1232 244 52 16 chr2 150748554 150748997 -99938857 - LTR37B LTR ERV1 -4 464 6 453 36 0 0 chr2 150749018 150749073 -99938781 + (TG)n Simple_repeat Simple_repeat 2 56 0 438 20 0 0 chr2 150749456 150749507 -99938347 + (TAAAA)n Simple_repeat Simple_repeat 5 55 0 329 231 19 0 chr2 150749694 150749798 -99938056 + (CATATA)n Simple_repeat Simple_repeat 6 111 0 2003 148 0 7 chr2 150749811 150750115 -99937739 + AluSx SINE Alu 1 302 -10 380 207 27 63 chr2 150750246 150750357 -99937497 - L2 LINE L2 -38 3275 3169 227 98 66 33 chr2 150750364 150750425 -99937429 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 388 296 161 12 chr2 150750678 150750921 -99936933 - MLT1K LTR MaLR -16 572 294 2800 198 4 2 chr2 150751024 150751524 -99936330 + L1PA10 LINE L1 8 508 -5367 898 154 20 0 chr2 150751524 150751673 -99936181 + L1PA10 LINE L1 717 868 -5007 * 20005 120 1 17 chr2 150751670 150754748 -99933106 + L1PA10 LINE L1 2509 5464 -982 3438 71 11 0 chr2 150754748 150755187 -99932667 - MLT2A1 LTR ERVL 0 444 1 20005 120 1 17 chr2 150755187 150756143 -99931711 + L1PA10 LINE L1 5464 6434 -12 771 230 109 4 chr2 150756218 150756475 -99931379 - MER69 DNA AcHobo -222 2304 2021 425 337 11 17 chr2 150756664 150756839 -99931015 - MER69 DNA AcHobo -2074 452 279 325 306 102 54 chr2 150757576 150757762 -99930092 - LTR16C LTR ERVL 0 491 297 27 29 0 0 chr2 150758185 150758219 -99929635 + AT_rich Low_complexity Low_complexity 1 34 0 264 59 0 0 chr2 150759415 150759449 -99928405 + (CA)n Simple_repeat Simple_repeat 1 34 0 1782 158 6 35 chr2 150759692 150760024 -99927830 - AluJo SINE Alu 0 312 1 324 296 71 84 chr2 150760090 150760398 -99927456 + MLT1I LTR MaLR 106 409 0 685 231 89 5 chr2 150760476 150760679 -99927175 - HAL1b LINE L1 -739 609 390 1485 205 98 16 chr2 150760680 150761046 -99926808 + MSTD LTR MaLR 1 396 0 430 190 40 161 chr2 150761047 150761303 -99926551 + MLT-int LTR MaLR 3 214 -1157 3868 240 88 39 chr2 150761317 150762378 -99925476 + MSTD-int LTR MaLR 623 1735 0 952 240 165 21 chr2 150762378 150762711 -99925143 + MSTD LTR MaLR 1 381 -15 22 0 0 0 chr2 150762763 150762785 -99925069 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 150762817 150762840 -99925014 + AT_rich Low_complexity Low_complexity 1 23 0 42868 32 22 1 chr2 150762840 150768862 -99918992 - L1PA2 LINE L1 -3 6152 2 540 318 119 19 chr2 150769856 150769960 -99917894 + MLT1J2 LTR MaLR 1 93 -357 1735 227 11 11 chr2 150769960 150770325 -99917529 - MLT1A1 LTR MaLR 0 365 1 540 318 119 19 chr2 150770325 150770531 -99917323 + MLT1J2 LTR MaLR 93 342 -108 2685 299 84 33 chr2 150770555 150770821 -99917033 - Charlie8 DNA MER1_type -520 1897 1646 1696 198 87 45 chr2 150770821 150771306 -99916548 + MLT1D LTR MaLR 1 505 0 2685 299 84 33 chr2 150771306 150772777 -99915077 - Charlie8 DNA MER1_type -771 1646 72 2112 126 0 10 chr2 150773632 150773933 -99913921 + AluSg SINE Alu 1 298 -12 38 51 0 0 chr2 150774369 150774428 -99913426 + AT_rich Low_complexity Low_complexity 1 59 0 21 57 0 0 chr2 150774494 150774529 -99913325 + AT_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr2 150774735 150774768 -99913086 + AT_rich Low_complexity Low_complexity 1 33 0 239 271 69 53 chr2 150775882 150776185 -99911669 + L1MEd LINE L1 783 1090 -5029 228 200 35 0 chr2 150776188 150776273 -99911581 + (TA)n Simple_repeat Simple_repeat 2 89 0 433 272 24 0 chr2 150776561 150776686 -99911168 + HAL1 LINE L1 1427 1554 -953 1912 141 3 0 chr2 150776756 150777039 -99910815 - AluJb SINE Alu -26 286 3 239 351 110 26 chr2 150777085 150777313 -99910541 + L2 LINE L2 2573 2819 -495 282 232 105 0 chr2 150777320 150777415 -99910439 - MER5B DNA MER1_type -7 171 67 342 310 70 12 chr2 150777460 150777702 -99910152 + L2 LINE L2 2809 3064 -208 1947 263 72 9 chr2 150779172 150779730 -99908124 - MLT1E LTR MaLR 0 593 1 2532 60 0 0 chr2 150779904 150780205 -99907649 - AluY SINE Alu -10 301 1 210 71 0 0 chr2 150781878 150781906 -99905948 + (GA)n Simple_repeat Simple_repeat 1 28 0 1613 153 55 7 chr2 150782688 150782996 -99904858 - L1PA16 LINE L1 0 6166 5844 2721 119 16 0 chr2 150783147 150783577 -99904277 - L1MA5A LINE L1 0 6297 5861 710 106 0 18 chr2 150783577 150783690 -99904164 + L1MA5A LINE L1 5683 5793 -504 420 220 0 0 chr2 150783690 150783808 -99904046 + (TA)n Simple_repeat Simple_repeat 1 118 0 540 83 10 94 chr2 150783808 150783904 -99903950 + L1MA5A LINE L1 5782 5869 -428 35 24 0 0 chr2 150784242 150784284 -99903570 + AT_rich Low_complexity Low_complexity 1 42 0 3297 223 44 19 chr2 150784385 150785316 -99902538 + L1MC4a LINE L1 6855 7808 0 388 270 0 80 chr2 150785460 150785597 -99902257 + L2 LINE L2 3187 3312 -1 2413 93 0 0 chr2 150786999 150787310 -99900544 - AluSq SINE Alu -2 311 1 741 295 68 4 chr2 150787397 150787631 -99900223 - MIR SINE MIR -1 261 13 214 147 0 0 chr2 150787715 150787749 -99900105 + (CAGAG)n Simple_repeat Simple_repeat 3 36 0 1778 184 0 7 chr2 150789325 150789678 -99898176 + AluJo SINE Alu 8 358 0 422 142 6 0 chr2 150790179 150790275 -99897579 - L1M LINE L1 -821 5325 5236 12183 228 59 22 chr2 150791225 150792409 -99895445 - L1MA9 LINE L1 -9 6367 5229 180 0 0 0 chr2 150792409 150792429 -99895425 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 12183 228 59 22 chr2 150792429 150795536 -99892318 - L1MA9 LINE L1 -1147 5229 1931 605 177 49 18 chr2 150795536 150795700 -99892154 - L1MB4 LINE L1 -2 6178 6010 12183 228 59 22 chr2 150795700 150797705 -99890149 - L1MA9 LINE L1 -4445 1931 2 319 244 34 92 chr2 150798014 150798133 -99889721 - MIR3 SINE MIR -6 202 91 335 279 284 5 chr2 150798323 150798520 -99889334 - MIR SINE MIR -9 253 2 1005 249 92 3 chr2 150799456 150799761 -99888093 - L1ME1 LINE L1 -76 6090 5759 22 0 0 0 chr2 150800361 150800383 -99887471 + AT_rich Low_complexity Low_complexity 1 22 0 5506 195 38 9 chr2 150800447 150800849 -99887005 - L1PA8 LINE L1 0 6172 5783 14279 102 12 7 chr2 150800849 150803765 -99884089 - L1PA8 LINE L1 -3 6169 3252 5506 195 38 9 chr2 150803765 150804278 -99883576 - L1PA8 LINE L1 -389 5783 4774 1570 181 4 4 chr2 150804354 150804630 -99883224 - AluJb SINE Alu -1 311 36 2937 201 16 0 chr2 150804646 150805199 -99882655 + MER68 LTR ERV1 1 562 0 183 42 0 0 chr2 150807859 150807883 -99879971 + (T)n Simple_repeat Simple_repeat 1 24 0 338 226 34 28 chr2 150808319 150808465 -99879389 - L1ME LINE L1 -338 5783 5652 2013 129 3 25 chr2 150808469 150808818 -99879036 - AluSx SINE Alu 0 342 1 728 254 83 62 chr2 150808821 150809207 -99878647 - L1ME LINE L1 -458 5663 5270 660 273 115 0 chr2 150809904 150810113 -99877741 - MIR SINE MIR -21 241 9 2420 69 7 7 chr2 150810429 150810733 -99877121 + AluSc SINE Alu 1 304 -5 2803 10 0 3 chr2 150811567 150811879 -99875975 - AluY SINE Alu 0 311 1 565 284 99 33 chr2 150812411 150812654 -99875200 + LTR16A LTR ERVL 179 437 -13 3004 290 56 48 chr2 150812664 150814048 -99873806 + ERVL LTR ERVL 1 1395 -3601 494 261 97 18 chr2 150814048 150814213 -99873641 - MER5B DNA MER1_type 0 178 1 886 283 178 46 chr2 150814230 150814707 -99873147 + ERVL LTR ERVL 1406 1945 -3051 1019 346 32 3 chr2 150814715 150815059 -99872795 + ERVL LTR ERVL 2734 3087 -1909 1766 181 44 44 chr2 150815731 150816117 -99871737 - MLT1B LTR MaLR -4 386 1 729 319 95 52 chr2 150816134 150816635 -99871219 + ERVL LTR ERVL 3885 4444 -1259 359 346 82 4 chr2 150816886 150817155 -99870699 + ERVL LTR ERVL 4701 4990 -664 180 97 0 0 chr2 150817306 150817337 -99870517 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 417 321 72 10 chr2 150817788 150817997 -99869857 + LTR16A LTR ERVL 220 441 -9 231 188 0 0 chr2 150818298 150818346 -99869508 + (TG)n Simple_repeat Simple_repeat 2 49 0 2345 82 0 12 chr2 150818378 150818706 -99869148 - L1PA13 LINE L1 -19 6144 5821 198 342 79 0 chr2 150819786 150819900 -99867954 - L2 LINE L2 -18 3254 3132 518 301 71 17 chr2 150819929 150820168 -99867686 + MIR SINE MIR 11 262 0 2534 63 0 0 chr2 150820692 150820994 -99866860 + AluY SINE Alu 1 302 -9 2223 118 3 0 chr2 150821431 150821735 -99866119 + AluSx SINE Alu 1 305 -7 1701 286 66 46 chr2 150822327 150823910 -99863944 - L1ME3A LINE L1 -2 6168 4557 244 328 15 0 chr2 150824125 150824256 -99863598 - L1ME3A LINE L1 -1796 4350 4218 1495 291 97 39 chr2 150824298 150825149 -99862705 + L2 LINE L2 2401 3313 0 181 225 0 0 chr2 150825206 150825246 -99862608 - L2 LINE L2 -219 3053 3014 226 121 0 0 chr2 150825618 150825651 -99862203 + U2 snRNA snRNA 1 33 -155 366 337 33 11 chr2 150826162 150826346 -99861508 - MIR SINE MIR -55 207 20 2085 134 3 10 chr2 150826816 150827129 -99860725 - AluSq SINE Alu -2 311 1 186 350 13 83 chr2 150827836 150827933 -99859921 - L3 LINE CR1 -1 1576 1493 1978 145 26 3 chr2 150827933 150828236 -99859618 - AluJb SINE Alu -2 310 1 186 350 13 83 chr2 150828236 150828295 -99859559 - L3 LINE CR1 -84 1493 1431 391 341 46 57 chr2 150828346 150828783 -99859071 - L2 LINE L2 -340 2974 2543 1001 222 20 25 chr2 150829525 150829728 -99858126 + MER58A DNA MER1_type 10 211 -13 745 191 0 0 chr2 150829753 150829884 -99857970 + AluJb SINE Alu 174 304 -8 521 296 158 27 chr2 150830795 150831218 -99856636 + L1ME3A LINE L1 5458 5929 -237 1739 209 45 0 chr2 150831221 150831580 -99856274 + MLT2D LTR ERVL 1 375 -39 383 335 59 24 chr2 150832010 150832180 -99855674 + L1MC/D LINE L1 5429 5604 -517 12079 32 6 1 chr2 150832959 150835184 -99852670 - L1PA4 LINE L1 0 6155 3920 5135 53 0 9 chr2 150835184 150835857 -99851997 + L1PA4 LINE L1 3256 3922 -2224 1972 160 41 36 chr2 150836914 150837278 -99850576 - MLT1B LTR MaLR 0 390 22 2041 127 43 27 chr2 150837278 150837647 -99850207 - THE1C LTR MaLR 0 375 1 1972 160 41 36 chr2 150837647 150837669 -99850185 - MLT1B LTR MaLR -368 22 2 475 267 138 55 chr2 150837947 150838273 -99849581 - L1ME3A LINE L1 -33 6137 5785 * 1740 210 30 5 chr2 150838265 150838632 -99849222 - L1ME1 LINE L1 -50 6116 5741 359 259 26 9 chr2 150838752 150838868 -99848986 - L1MEc LINE L1 -2949 3197 3080 1358 234 110 14 chr2 150838960 150839523 -99848331 - Zaphod DNA AcHobo -133 3898 3282 1748 197 49 6 chr2 150839540 150840215 -99847639 + L1M4 LINE L1 4959 5663 -515 679 234 90 22 chr2 150840959 150841358 -99846496 - MER113 DNA MER1_type? -72 449 3 352 296 22 30 chr2 150842591 150842726 -99845128 + MIR SINE MIR 16 149 -113 286 166 2 0 chr2 150843888 150843951 -99843903 - L1MEc LINE L1 -3945 2235 2138 1189 226 145 3 chr2 150843973 150844624 -99843230 - L1MD2 LINE L1 -16 6326 5459 4205 162 47 16 chr2 150844634 150845405 -99842449 - L1MB1 LINE L1 -1 6167 5366 2093 130 3 0 chr2 150845405 150845697 -99842157 - AluSg SINE Alu -17 293 1 4205 162 47 16 chr2 150845697 150845777 -99842077 - L1MB1 LINE L1 -802 5366 5290 2114 212 62 34 chr2 150845760 150846596 -99841258 - L1MD2 LINE L1 -742 5483 4621 * 10401 95 10 1 chr2 150846824 150849106 -99838748 - L1PA7 LINE L1 -3 6151 3871 1832 141 57 43 chr2 150849120 150849490 -99838364 - THE1C LTR MaLR 0 375 1 611 289 85 51 chr2 150849583 150850530 -99837324 - L1MD2 LINE L1 -4593 1717 711 2343 100 3 0 chr2 150850968 150851269 -99836585 - AluSp SINE Alu -11 302 1 1990 157 120 5 chr2 150852235 150852618 -99835236 + MSTA LTR MaLR 1 427 -1 26 0 0 0 chr2 150853925 150853951 -99833903 + AT_rich Low_complexity Low_complexity 1 26 0 240 378 33 20 chr2 150854456 150854607 -99833247 + MIR3 SINE MIR 10 162 -46 234 0 0 0 chr2 150854858 150854884 -99832970 + (T)n Simple_repeat Simple_repeat 1 26 0 256 324 19 19 chr2 150856069 150856177 -99831677 - MER94 DNA DNA -16 118 11 212 274 0 0 chr2 150906690 150906763 -99781091 + G-rich Low_complexity Low_complexity 1 73 0 389 227 94 39 chr2 150906975 150907103 -99780751 - L2 LINE L2 -45 3268 3134 2141 160 54 29 chr2 150907196 150907548 -99780306 + L1P4 LINE L1 4823 5165 -1001 2301 95 3 3 chr2 150907548 150907854 -99780000 + AluY SINE Alu 1 306 -5 2141 160 54 29 chr2 150907854 150908199 -99779655 + L1P4 LINE L1 5165 5532 -634 267 310 142 9 chr2 150909154 150909267 -99778587 + L2 LINE L2 3186 3313 0 213 39 0 0 chr2 150910852 150910878 -99776976 + (A)n Simple_repeat Simple_repeat 1 26 0 280 330 107 14 chr2 150912658 150912873 -99774981 + L2 LINE L2 3006 3240 -73 916 320 113 31 chr2 150912992 150913507 -99774347 - L3 LINE CR1 -46 1531 975 1378 186 62 24 chr2 150913789 150914080 -99773774 - AluJo SINE Alu -10 302 1 202 150 25 0 chr2 150914269 150914309 -99773545 + A-rich Low_complexity Low_complexity 2 42 0 43 47 0 0 chr2 150914647 150914711 -99773143 + AT_rich Low_complexity Low_complexity 1 64 0 1305 268 63 76 chr2 150914759 150914843 -99773011 - HAL1 LINE L1 -78 2429 2345 2510 158 21 5 chr2 150914843 150915262 -99772592 - MSTB LTR MaLR 0 426 1 1305 268 63 76 chr2 150915262 150915485 -99772369 - HAL1 LINE L1 -162 2345 2121 2144 114 0 0 chr2 150915485 150915774 -99772080 - AluSg1 SINE Alu -20 289 1 1305 268 63 76 chr2 150915774 150915840 -99772014 - HAL1 LINE L1 -386 2121 2056 1942 119 52 7 chr2 150915840 150916126 -99771728 - AluSx SINE Alu -13 299 1 1305 268 63 76 chr2 150916126 150916292 -99771562 - HAL1 LINE L1 -451 2056 1889 627 94 31 0 chr2 150916292 150916388 -99771466 - L1MA8 LINE L1 -6 6285 6187 1305 268 63 76 chr2 150916388 150916660 -99771194 - HAL1 LINE L1 -618 1889 1626 2228 103 3 3 chr2 150916660 150916962 -99770892 - AluSc SINE Alu -7 302 1 1305 268 63 76 chr2 150916962 150917097 -99770757 - HAL1 LINE L1 -881 1626 1491 261 261 0 31 chr2 150917122 150917187 -99770667 + polypyrimidine Low_complexity Low_complexity 3 65 0 1327 302 75 55 chr2 150917187 150918380 -99769474 - HAL1 LINE L1 -1042 1465 248 474 147 55 0 chr2 150918463 150918572 -99769282 - MER53 DNA DNA -53 136 22 24 0 0 0 chr2 150918690 150918714 -99769140 + AT_rich Low_complexity Low_complexity 1 24 0 395 211 89 0 chr2 150919265 150919355 -99768499 + MER4A LTR ERV1 1 98 -566 1763 125 157 80 chr2 150919355 150919730 -99768124 + MER4A LTR ERV1 261 664 0 22 35 0 0 chr2 150922238 150922267 -99765587 + AT_rich Low_complexity Low_complexity 1 29 0 1962 138 7 3 chr2 150922662 150922960 -99764894 + MER7A DNA MER2_type 49 345 -1 311 243 62 102 chr2 150923076 150923479 -99764375 - L1M4 LINE L1 -2713 3433 3047 2676 135 19 0 chr2 150923659 150924080 -99763774 + L1PA16 LINE L1 5695 6123 -43 222 327 84 0 chr2 150924096 150924203 -99763651 - MIR SINE MIR -84 178 63 414 268 126 43 chr2 150927320 150927551 -99760303 - LTR16A1 LTR ERVL 0 457 208 1915 136 0 34 chr2 150927978 150928298 -99759556 + AluSx SINE Alu 1 310 0 357 306 22 55 chr2 150928793 150928976 -99758878 + MIR SINE MIR 20 196 -66 41839 57 5 1 chr2 150929128 150935251 -99752603 + L1PA5 LINE L1 2 6150 -4 26 30 0 0 chr2 150935774 150935807 -99752047 + AT_rich Low_complexity Low_complexity 1 33 0 896 201 48 82 chr2 150936577 150936955 -99750899 + L1ME LINE L1 3653 4017 -2129 2629 52 0 0 chr2 150936964 150937273 -99750581 + AluY SINE Alu 3 311 0 4148 245 58 104 chr2 150937474 150937767 -99750087 + L1MDa LINE L1 119 424 -6116 396 0 0 0 chr2 150937767 150937811 -99750043 + (CA)n Simple_repeat Simple_repeat 2 45 0 4148 245 58 104 chr2 150937811 150940032 -99747822 + L1MDa LINE L1 424 2516 -4024 606 186 22 147 chr2 150940117 150940393 -99747461 + L1ME LINE L1 5201 5443 -721 3589 186 39 31 chr2 150940408 150941182 -99746672 + L1MC3 LINE L1 6686 7465 -320 384 311 44 17 chr2 150941195 150941375 -99746479 - L2 LINE L2 -281 3032 2848 * 812 171 89 49 chr2 150941366 150941612 -99746242 + MER5C DNA MER1_type 12 267 -57 417 239 46 18 chr2 150941695 150941804 -99746050 - MER5A DNA MER1_type -77 112 1 * 776 283 21 28 chr2 150941804 150942076 -99745778 - L2 LINE L2 -626 2688 2419 539 274 66 24 chr2 150943567 150943779 -99744075 + MIR SINE MIR 36 256 -6 2007 218 71 133 chr2 150945349 150945662 -99742192 + L1MEc LINE L1 40 371 -6025 1557 158 90 0 chr2 150945662 150945790 -99742064 + AluSx SINE Alu 1 116 -196 185 0 40 0 chr2 150945790 150945815 -99742039 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1557 158 90 0 chr2 150945815 150945965 -99741889 + AluSx SINE Alu 116 304 -8 2007 218 71 133 chr2 150945965 150946645 -99741209 + L1MEc LINE L1 371 972 -5424 2883 297 71 14 chr2 150946654 150947910 -99739944 + L2 LINE L2 1760 3083 -230 296 286 148 21 chr2 150947960 150948149 -99739705 - L1MC/D LINE L1 -2144 5664 5452 24 53 0 0 chr2 150948150 150948188 -99739666 + AT_rich Low_complexity Low_complexity 1 38 0 354 72 93 0 chr2 150948431 150948528 -99739326 + (TA)n Simple_repeat Simple_repeat 2 107 0 285 311 66 9 chr2 150948676 150948782 -99739072 + MIR SINE MIR 92 203 -59 239 256 37 12 chr2 150949181 150949263 -99738591 - L1ME2 LINE L1 -27 6137 6054 1875 295 74 52 chr2 150949327 150950921 -99736933 - L1ME3A LINE L1 -133 6106 4548 5844 117 7 0 chr2 150950921 150952013 -99735841 + L1PA13 LINE L1 5047 6144 -19 1875 295 74 52 chr2 150952013 150953303 -99734551 - L1ME3A LINE L1 -1691 4548 3151 2268 97 3 10 chr2 150953303 150953614 -99734240 - AluSg SINE Alu -1 309 1 1875 295 74 52 chr2 150953614 150953839 -99734015 - L1ME3A LINE L1 -3088 3151 2932 380 301 81 29 chr2 150953843 150954310 -99733544 - L1MEd LINE L1 -3568 2647 2179 23 0 0 0 chr2 150954559 150954582 -99733272 + AT_rich Low_complexity Low_complexity 1 23 0 448 329 38 54 chr2 150954640 150955003 -99732851 - L1MEd LINE L1 -829 1747 1517 248 244 34 119 chr2 150955072 150955105 -99732749 - LTR16C LTR ERVL -2 489 455 2879 3 0 0 chr2 150955105 150955415 -99732439 + AluYa5 SINE Alu 1 310 -1 248 244 34 119 chr2 150955415 150955557 -99732297 - LTR16C LTR ERVL -36 455 329 516 294 37 52 chr2 150955773 150956169 -99731685 - L1MEd LINE L1 -4890 1315 956 643 185 34 0 chr2 150956455 150956574 -99731280 - FLAM_A SINE Alu -10 132 10 1521 225 37 48 chr2 150958489 150958973 -99728881 + L1ME1 LINE L1 5683 6161 -5 559 343 14 9 chr2 150959794 150960010 -99727844 - MIR SINE MIR -44 218 2 332 343 36 7 chr2 150960377 150960514 -99727340 - MIR SINE MIR -117 145 5 22 35 0 0 chr2 150960919 150960948 -99726906 + AT_rich Low_complexity Low_complexity 1 29 0 2254 56 30 0 chr2 150961207 150961477 -99726377 - AluY SINE Alu -13 298 21 3962 223 61 36 chr2 150961634 150963479 -99724375 + L1MD2 LINE L1 248 2045 -4520 2608 53 0 0 chr2 150963479 150963781 -99724073 - AluY SINE Alu -9 302 1 3962 223 61 36 chr2 150963781 150964299 -99723555 + L1MD2 LINE L1 2045 2549 -4016 2205 110 0 0 chr2 150964299 150964607 -99723247 + AluY SINE Alu 1 308 -3 3962 223 61 36 chr2 150964607 150964700 -99723154 + L1MD2 LINE L1 2549 6515 -50 6162 151 61 36 chr2 150964715 150965443 -99722411 + L1MA4 LINE L1 3818 4526 -1774 2342 90 3 0 chr2 150965443 150965743 -99722111 + AluSp SINE Alu 1 301 -12 6162 151 61 36 chr2 150965743 150966151 -99721703 + L1MA4 LINE L1 4526 4922 -1378 3685 64 0 0 chr2 150966151 150966621 -99721233 + L1PA7 LINE L1 5677 6146 -8 6162 151 61 36 chr2 150966621 150967606 -99720248 + L1MA4 LINE L1 4922 6033 -267 2218 112 0 0 chr2 150967606 150967902 -99719952 - AluSx SINE Alu -16 296 1 6162 151 61 36 chr2 150967902 150968173 -99719681 + L1MA4 LINE L1 6033 6296 -4 274 71 54 36 chr2 150968176 150968232 -99719622 + L1MB2 LINE L1 6115 6171 0 1493 251 96 20 chr2 150968258 150968641 -99719213 + L1MD2 LINE L1 5818 6249 -110 1970 239 26 73 chr2 150968641 150969298 -99718556 - MLT1E2 LTR MaLR 0 626 1 1493 251 96 20 chr2 150969298 150969416 -99718438 + L1MD2 LINE L1 6249 6357 -2 356 322 82 44 chr2 150969428 150969611 -99718243 + L1MEc LINE L1 1627 1816 -4580 401 293 159 13 chr2 150969634 150970081 -99717773 + L1MEc LINE L1 1883 2394 -4002 1996 138 10 16 chr2 150970081 150970392 -99717462 + AluSq SINE Alu 1 309 -4 6965 56 13 0 chr2 150970647 150972091 -99715763 - L1PA7 LINE L1 -1 6153 4693 315 0 0 0 chr2 150972091 150972126 -99715728 + (TTG)n Simple_repeat Simple_repeat 2 36 0 6965 56 13 0 chr2 150972126 150972380 -99715474 - L1PA7 LINE L1 -1461 4693 4444 866 284 58 36 chr2 150972406 150973039 -99714815 + L1MEc LINE L1 2520 3166 -3049 493 304 125 56 chr2 150973715 150973913 -99713941 - L2 LINE L2 0 3313 3130 2389 91 3 3 chr2 150973913 150974221 -99713633 + AluSp SINE Alu 1 308 -5 493 304 125 56 chr2 150974221 150974721 -99713133 - L2 LINE L2 -183 3130 2577 257 355 91 21 chr2 150975818 150976004 -99711850 - MIR SINE MIR -34 228 30 300 331 133 6 chr2 150976341 150976507 -99711347 + MIR SINE MIR 50 236 -26 804 320 98 14 chr2 150976630 150976977 -99710877 - LTR16C LTR ERVL -43 448 73 2282 98 10 0 chr2 150977098 150977394 -99710460 + AluSq SINE Alu 1 299 -14 314 232 29 0 chr2 150977570 150977639 -99710215 + L2 LINE L2 3234 3304 -9 309 365 100 8 chr2 150979046 150979287 -99708567 - L2 LINE L2 -498 2816 2554 795 304 19 5 chr2 150979634 150979841 -99708013 + MIR SINE MIR 32 241 -21 238 252 45 81 chr2 150979867 150979978 -99707876 + MIR SINE MIR 156 262 0 380 284 26 0 chr2 150981306 150981436 -99706418 - MIR SINE MIR -55 207 72 243 0 0 0 chr2 150981915 150981942 -99705912 + (CA)n Simple_repeat Simple_repeat 2 28 0 762 258 47 37 chr2 150982625 150982888 -99704966 - L2 LINE L2 -862 2452 2184 1172 198 25 110 chr2 150982888 150983287 -99704567 + MLT1A1 LTR MaLR 1 365 0 762 258 47 37 chr2 150983287 150983321 -99704533 - L2 LINE L2 -1130 2184 2152 354 248 73 0 chr2 150983507 150983616 -99704238 + L1ME4a LINE L1 6004 6120 -1 1586 163 3 56 chr2 150984526 150984814 -99703040 + AluJb SINE Alu 2 274 -38 288 287 37 37 chr2 150987258 150987366 -99700488 - MIR SINE MIR -108 154 47 318 263 12 0 chr2 150987387 150987467 -99700387 + Charlie7 DNA MER1_type 21 101 -2511 560 249 149 50 chr2 150987552 150987894 -99699960 + Charlie7 DNA MER1_type 252 627 -1985 436 250 102 40 chr2 150987922 150988322 -99699532 + Charlie7 DNA MER1_type 2176 2600 -12 216 0 0 0 chr2 150988720 150988744 -99699110 + (A)n Simple_repeat Simple_repeat 1 24 0 380 303 79 24 chr2 150989427 150989592 -99698262 + MIR SINE MIR 3 176 -86 2058 173 110 5 chr2 150989823 150990240 -99697614 + LOR1b LTR ERV1 1 461 0 222 118 0 0 chr2 150990899 150990933 -99696921 + (A)n Simple_repeat Simple_repeat 1 34 0 276 248 20 69 chr2 150992562 150992663 -99695191 - MIR SINE MIR -16 246 151 1912 208 58 121 chr2 150992843 150993580 -99694274 + LTR8A LTR ERV1 34 724 -3 2043 181 40 67 chr2 150993935 150994415 -99693439 + MLT1C LTR MaLR 1 467 0 584 296 77 17 chr2 150995219 150995452 -99692402 - MIR SINE MIR -14 248 2 188 328 0 0 chr2 150996136 150996194 -99691660 - MIR3 SINE MIR -11 197 140 256 352 31 16 chr2 150996298 150996426 -99691428 + L2 LINE L2 3141 3270 -2 649 211 18 12 chr2 150998559 150998725 -99689129 - MER104 DNA Tc2 -6 174 8 639 305 93 19 chr2 150999134 150999403 -99688451 - L2 LINE L2 -1 3271 2983 320 318 173 0 chr2 150999711 150999821 -99688033 - MIR SINE MIR -132 130 2 297 109 0 0 chr2 151001308 151001354 -99686500 + (CA)n Simple_repeat Simple_repeat 2 47 0 336 24 0 0 chr2 151004896 151004937 -99682917 + (TG)n Simple_repeat Simple_repeat 2 42 0 453 297 79 18 chr2 151007306 151007471 -99680383 + MER115 DNA AcHobo 35 209 -484 2370 105 0 3 chr2 151007479 151007792 -99680062 - AluSq SINE Alu -1 312 1 197 333 14 14 chr2 151007934 151008006 -99679848 - MIR3 SINE MIR -3 205 134 523 280 5 26 chr2 151008068 151008261 -99679593 - MER46C DNA MER2_type -1 337 149 2210 143 16 0 chr2 151008266 151008643 -99679211 + MLT1B LTR MaLR 8 390 0 270 163 175 12 chr2 151008656 151008736 -99679118 - MER46C DNA MER2_type -211 127 35 406 250 24 59 chr2 151009688 151009825 -99678029 - MIR SINE MIR -63 145 4 1279 233 143 23 chr2 151010189 151010622 -99677232 + MLT1D LTR MaLR 21 505 0 234 136 0 0 chr2 151010845 151010889 -99676965 + (ATG)n Simple_repeat Simple_repeat 2 45 0 22 0 0 0 chr2 151011002 151011024 -99676830 + AT_rich Low_complexity Low_complexity 1 22 0 6431 76 38 4 chr2 151011131 151012120 -99675734 - L1PA10 LINE L1 -4 6164 5161 185 206 0 0 chr2 151012145 151012179 -99675675 - L2 LINE L2 -15 3298 3265 2245 112 3 3 chr2 151012492 151012797 -99675057 - AluSg SINE Alu -5 305 1 216 0 0 0 chr2 151013303 151013327 -99674527 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 479 299 75 0 chr2 151013427 151013601 -99674253 - MIR SINE MIR 0 262 76 336 287 0 0 chr2 151013644 151013731 -99674123 - MIR SINE MIR -4 258 172 262 298 75 0 chr2 151014320 151014414 -99673440 + L3 LINE CR1 366 466 -1111 184 366 99 0 chr2 151015247 151015378 -99672476 + L3 LINE CR1 1254 1397 -180 248 333 115 10 chr2 151015455 151015551 -99672303 + MIR SINE MIR 20 125 -83 21 0 0 0 chr2 151015986 151016007 -99671847 + AT_rich Low_complexity Low_complexity 1 21 0 347 266 16 99 chr2 151018274 151018466 -99669388 - L2 LINE L2 -7 3306 3131 1808 171 46 3 chr2 151018618 151018987 -99668867 - L1 LINE L1 -972 5174 4790 1360 141 47 25 chr2 151018989 151019266 -99668588 - L1 LINE L1 -1274 4872 4590 1137 138 59 5 chr2 151019266 151019565 -99668289 + L1MA6 LINE L1 5177 5489 -743 2534 40 13 3 chr2 151019581 151019881 -99667973 + AluY SINE Alu 1 303 -8 274 264 0 11 chr2 151019884 151019975 -99667879 - L1MC4 LINE L1 -1339 6703 6614 339 130 0 0 chr2 151019975 151020029 -99667825 + (TA)n Simple_repeat Simple_repeat 2 55 0 207 0 0 0 chr2 151020029 151020052 -99667802 + (CA)n Simple_repeat Simple_repeat 2 24 0 4411 150 27 3 chr2 151020052 151020830 -99667024 + L1MA6 LINE L1 5495 6291 -9 22 80 0 0 chr2 151020834 151020884 -99666970 + AT_rich Low_complexity Low_complexity 1 50 0 1542 82 0 5 chr2 151022000 151022196 -99665658 + AluY SINE Alu 104 298 -13 423 251 138 12 chr2 151022609 151022776 -99665078 + MIR SINE MIR 21 208 -54 560 252 68 52 chr2 151023172 151023422 -99664432 + MIR SINE MIR 9 262 0 203 368 44 0 chr2 151023458 151023526 -99664328 + MIR SINE MIR 25 95 -167 504 299 126 43 chr2 151023537 151023768 -99664086 - MIR SINE MIR -1 261 12 33 0 0 0 chr2 151024090 151024123 -99663731 + AT_rich Low_complexity Low_complexity 1 33 0 189 325 0 0 chr2 151025757 151025797 -99662057 - L2 LINE L2 -107 3165 3126 354 335 33 47 chr2 151025971 151026186 -99661668 + L1MC/D LINE L1 5578 5789 -2019 343 244 44 88 chr2 151026299 151026380 -99661474 + HAL1b LINE L1 1188 1260 -88 1979 153 3 0 chr2 151026380 151026674 -99661180 - AluSx SINE Alu -17 295 1 343 244 44 88 chr2 151026674 151026752 -99661102 + HAL1b LINE L1 1260 1340 -8 430 342 87 38 chr2 151026830 151027408 -99660446 + L2 LINE L2 2697 3313 0 23 0 0 0 chr2 151028010 151028033 -99659821 + AT_rich Low_complexity Low_complexity 1 23 0 440 172 0 11 chr2 151028061 151028154 -99659700 + (CA)n Simple_repeat Simple_repeat 1 92 0 578 230 63 0 chr2 151030415 151030541 -99657313 + L2 LINE L2 3139 3272 0 874 290 85 19 chr2 151030689 151031055 -99656799 + MLT1J2 LTR MaLR 43 432 -18 2483 167 31 4 chr2 151033441 151033896 -99653958 - MLT1C LTR MaLR 0 467 1 1635 249 88 34 chr2 151034574 151035059 -99652795 + MLT1E2 LTR MaLR 1 525 -101 2140 134 0 3 chr2 151035059 151035366 -99652488 - AluSx SINE Alu -6 306 1 1635 249 88 34 chr2 151035366 151035474 -99652380 + MLT1E2 LTR MaLR 525 626 0 268 297 94 61 chr2 151035520 151035732 -99652122 - MIR SINE MIR -19 243 25 670 317 35 9 chr2 151036201 151036428 -99651426 - MIR SINE MIR -12 250 18 183 202 48 167 chr2 151036430 151036514 -99651340 + L2 LINE L2 3192 3265 -48 243 0 0 0 chr2 151036565 151036592 -99651262 + (A)n Simple_repeat Simple_repeat 1 27 0 274 321 123 0 chr2 151037075 151037181 -99650673 + L2 LINE L2 3191 3309 -4 204 40 0 0 chr2 151037330 151037355 -99650499 + (A)n Simple_repeat Simple_repeat 1 25 0 1109 293 60 24 chr2 151037360 151037906 -99649948 - MLT1L LTR MaLR -34 581 16 21 0 0 0 chr2 151038219 151038240 -99649614 + AT_rich Low_complexity Low_complexity 1 21 0 6107 93 41 6 chr2 151039801 151040771 -99647083 - L1MA2 LINE L1 0 6304 5300 2278 126 0 0 chr2 151040929 151041238 -99646616 + AluSx SINE Alu 3 311 -1 809 211 6 11 chr2 151041457 151041637 -99646217 + MIR SINE MIR 77 255 -7 261 0 0 0 chr2 151041868 151041897 -99645957 + (A)n Simple_repeat Simple_repeat 1 29 0 446 261 137 38 chr2 151042208 151042753 -99645101 - MLT1F LTR MaLR -5 537 1 358 311 90 38 chr2 151042941 151043630 -99644224 + L1ME4a LINE L1 3214 3938 -2208 259 285 13 70 chr2 151043955 151044113 -99643741 + L1ME4a LINE L1 4054 4202 -1944 240 254 61 0 chr2 151044327 151044436 -99643418 + L1ME4a LINE L1 5740 5856 -314 461 281 150 6 chr2 151044463 151044623 -99643231 + MIR SINE MIR 79 261 -1 326 317 35 7 chr2 151044942 151045084 -99642770 + L1ME4a LINE L1 5969 6114 -7 291 185 36 5 chr2 151046499 151046590 -99641264 + MLT1J1 LTR MaLR 315 397 -12 2972 153 21 69 chr2 151046633 151047141 -99640713 + MLT2B3 LTR ERVL 1 479 -75 303 28 0 0 chr2 151047141 151047177 -99640677 + (TG)n Simple_repeat Simple_repeat 1 36 0 2972 153 21 69 chr2 151047177 151047250 -99640604 + MLT2B3 LTR ERVL 479 554 0 368 270 141 32 chr2 151048784 151048969 -99638885 - MIR3 SINE MIR -2 206 2 682 239 86 0 chr2 151049149 151049312 -99638542 + MIR SINE MIR 64 240 -22 578 248 61 32 chr2 151050602 151050848 -99637006 + L1ME4a LINE L1 5409 5661 -460 303 271 0 24 chr2 151050853 151050938 -99636916 + L1MC4 LINE L1 6614 6696 -1346 391 277 46 5 chr2 151050953 151051148 -99636706 + L1ME4a LINE L1 5713 5915 -206 8026 89 10 0 chr2 151051448 151054358 -99633496 + L1PA7 LINE L1 3151 6150 -4 404 305 113 11 chr2 151054480 151054657 -99633197 + MIR SINE MIR 52 246 -16 424 325 127 0 chr2 151054668 151054834 -99633020 - MIR SINE MIR -19 243 57 345 47 0 0 chr2 151055123 151055166 -99632688 + (TG)n Simple_repeat Simple_repeat 2 44 0 1671 156 116 3 chr2 151055845 151056173 -99631681 - MLT1A1 LTR MaLR 0 365 1 1326 238 27 0 chr2 151056515 151056851 -99631003 - L1MA9 LINE L1 -886 5260 4916 * 4461 171 43 20 chr2 151056848 151057825 -99630029 + L1MA9 LINE L1 5276 6274 -38 302 292 43 43 chr2 151060240 151060401 -99627453 - MIR SINE MIR -10 252 92 4533 123 9 47 chr2 151060401 151061165 -99626689 + L1PA16 LINE L1 5423 6157 -9 227 279 73 0 chr2 151061195 151061263 -99626591 - MIR SINE MIR -164 98 26 2937 241 16 2 chr2 151061533 151062163 -99625691 + MER82 DNA MER2_type 14 652 -1 206 266 106 43 chr2 151063212 151063306 -99624548 + L2 LINE L2 3214 3313 0 330 204 9 124 chr2 151063463 151063576 -99624278 - L2 LINE L2 0 3313 3214 24 32 0 0 chr2 151064861 151064892 -99622962 + AT_rich Low_complexity Low_complexity 1 31 0 2522 151 23 16 chr2 151064911 151065342 -99622512 + Tigger2a DNA MER2_type 1 434 0 234 279 169 32 chr2 151065748 151065902 -99621952 + L3b LINE CR1 1288 1462 -121 365 254 47 107 chr2 151069404 151069703 -99618151 + L1ME4a LINE L1 5745 6025 -96 1781 183 119 67 chr2 151069718 151069787 -99618067 - MLT1D LTR MaLR 0 505 441 2209 132 14 14 chr2 151069787 151070158 -99617696 + L1PA16 LINE L1 5795 6165 -1 1781 183 119 67 chr2 151070158 151070568 -99617286 - MLT1D LTR MaLR -64 441 1 1999 132 14 0 chr2 151070673 151070954 -99616900 + AluSx SINE Alu 3 287 -25 275 375 88 7 chr2 151071277 151071413 -99616441 - L2 LINE L2 -1 3271 3125 226 279 19 10 chr2 151071868 151071972 -99615882 - L2 LINE L2 -621 2693 2589 602 301 47 56 chr2 151071983 151072305 -99615549 + L2 LINE L2 2995 3313 0 268 312 210 22 chr2 151073194 151073332 -99614522 + MIR SINE MIR 79 242 -20 2033 198 8 52 chr2 151074147 151074626 -99613228 + LTR22A LTR ERVK 1 458 0 253 341 23 0 chr2 151074927 151075015 -99612839 - MIR SINE MIR -149 113 24 332 320 41 29 chr2 151075448 151075620 -99612234 - MLT1J2 LTR MaLR -14 436 263 1016 180 115 25 chr2 151076055 151076255 -99611599 - MER58A DNA MER1_type -6 218 1 288 0 0 0 chr2 151076304 151076336 -99611518 + (TGG)n Simple_repeat Simple_repeat 1 32 0 2685 136 2 5 chr2 151077432 151077860 -99609994 - L1P LINE L1 -2439 3707 3281 601 270 7 7 chr2 151077868 151078016 -99609838 - L1P3 LINE L1 -6313 148 1 943 195 0 0 chr2 151078020 151078179 -99609675 - FAM SINE Alu -1 48 1 252 253 46 0 chr2 151078386 151078482 -99609372 + LTR67 LTR ERVL 32 197 -360 2131 70 7 64 chr2 151079016 151079314 -99608540 - AluY SINE Alu -25 286 6 280 319 181 21 chr2 151079677 151079821 -99608033 - MIR3 SINE MIR -25 183 17 433 282 218 9 chr2 151081039 151081255 -99606599 - MIR SINE MIR 0 262 2 42440 50 6 1 chr2 151081890 151088001 -99599853 + L1PA4 LINE L1 14 6155 0 370 278 139 26 chr2 151088387 151088581 -99599273 + MIR SINE MIR 20 235 -27 233 307 109 20 chr2 151088619 151088720 -99599134 - L2 LINE L2 -37 3235 3126 358 286 44 0 chr2 151088999 151089090 -99598764 + MER5A DNA MER1_type 10 104 -85 6757 54 3 1 chr2 151089138 151089987 -99597867 + L1PA7 LINE L1 5301 6151 -3 270 238 143 0 chr2 151090100 151090184 -99597670 + MIR SINE MIR 113 208 -54 197 373 50 50 chr2 151090933 151091255 -99596599 - L2 LINE L2 -443 2871 2550 2032 125 4 4 chr2 151091731 151092037 -99595817 - AluSx SINE Alu 0 306 1 432 231 58 10 chr2 151092311 151092415 -99595439 - MER5B DNA MER1_type 0 178 70 338 118 0 0 chr2 151092432 151092483 -99595371 + MADE1 DNA Mariner 1 51 -29 531 205 128 13 chr2 151092496 151092652 -99595202 - MER5B DNA MER1_type -4 174 1 2144 132 0 0 chr2 151092739 151093050 -99594804 - AluY SINE Alu 0 311 1 2129 128 30 41 chr2 151093376 151093744 -99594110 - THE1B LTR MaLR 0 364 1 6904 132 45 11 chr2 151094124 151094666 -99593188 + Tigger3b DNA MER2_type 2 524 -2504 249 33 0 0 chr2 151094666 151094696 -99593158 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 6904 132 45 11 chr2 151094696 151095342 -99592512 + Tigger3b DNA MER2_type 524 1231 0 351 65 0 0 chr2 151095593 151095639 -99592215 + (CA)n Simple_repeat Simple_repeat 1 46 0 1393 149 88 3 chr2 151097004 151097299 -99590555 + MER33 DNA MER1_type 1 320 -4 22 56 0 0 chr2 151097436 151097472 -99590382 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 151098040 151098062 -99589792 + AT_rich Low_complexity Low_complexity 1 22 0 448 119 0 0 chr2 151098823 151098890 -99588964 - Alu SINE Alu -11 301 235 331 177 16 0 chr2 151098890 151098952 -99588902 - AluJb SINE Alu -170 132 70 833 284 51 30 chr2 151099086 151099560 -99588294 - L1MC4a LINE L1 -301 5820 5410 573 371 11 25 chr2 151100391 151100674 -99587180 - L3 LINE CR1 -3 1574 1296 312 279 106 45 chr2 151101956 151102135 -99585719 + MIR SINE MIR 15 204 -58 997 306 70 38 chr2 151102561 151103031 -99584823 - LTR16C LTR ERVL -6 485 1 1009 193 15 0 chr2 151103462 151103664 -99584190 + L1 LINE L1 3817 4021 -2125 559 232 0 0 chr2 151105514 151105626 -99582228 + MER63 DNA MER1_type 1 738 -98 366 406 31 6 chr2 151105745 151105905 -99581949 + MIR3 SINE MIR 6 169 -39 224 280 72 72 chr2 151105953 151106078 -99581776 + L2 LINE L2 3146 3270 -2 210 71 0 0 chr2 151106769 151106797 -99581057 + (A)n Simple_repeat Simple_repeat 1 28 0 544 170 7 21 chr2 151107390 151107531 -99580323 + (CA)n Simple_repeat Simple_repeat 1 139 0 235 319 8 84 chr2 151109663 151109782 -99578072 - L2 LINE L2 -1 3312 3203 248 324 36 27 chr2 151109863 151109974 -99577880 + MIR SINE MIR 15 126 -136 2362 93 0 3 chr2 151110086 151110387 -99577467 + AluSq SINE Alu 1 300 -13 378 0 0 0 chr2 151111711 151111753 -99576101 + (CA)n Simple_repeat Simple_repeat 1 42 0 357 82 0 0 chr2 151112192 151112241 -99575613 + (CA)n Simple_repeat Simple_repeat 2 50 0 345 275 0 0 chr2 151112423 151112503 -99575351 + L2 LINE L2 3193 3272 0 331 247 120 44 chr2 151114567 151114725 -99573129 + LTR33A LTR ERVL 23 192 -331 431 237 25 25 chr2 151114795 151114913 -99572941 + LTR33A LTR ERVL 406 523 0 612 168 9 9 chr2 151115107 151115214 -99572640 + U6 snRNA snRNA 1 107 0 281 305 90 12 chr2 151115949 151116116 -99571738 - HAL1b LINE L1 -41 1307 1128 1464 290 95 27 chr2 151116417 151117111 -99570743 + HAL1 LINE L1 365 1105 -1402 1052 170 25 0 chr2 151117115 151117315 -99570539 + L1M4 LINE L1 4873 5077 -1069 2043 148 11 11 chr2 151117320 151117693 -99570161 - L1MA4 LINE L1 -1 6299 5927 2047 150 21 34 chr2 151117693 151118073 -99569781 + MSTA-int LTR MaLR 1272 1646 -5 2479 141 53 15 chr2 151118102 151118129 -99569725 + MSTA LTR MaLR 2 26 -402 2473 119 6 0 chr2 151118129 151118482 -99569372 - THE1A LTR MaLR 0 355 1 2479 141 53 15 chr2 151118482 151118865 -99568989 + MSTA LTR MaLR 26 428 0 5143 153 38 19 chr2 151118867 151119839 -99568015 + L1MA7 LINE L1 5296 6286 -5 27 49 0 0 chr2 151119839 151119880 -99567974 + AT_rich Low_complexity Low_complexity 1 41 0 442 168 159 0 chr2 151119881 151119988 -99567866 + L1MB7 LINE L1 6061 6184 0 727 265 31 56 chr2 151119988 151120275 -99567579 - L2 LINE L2 -1123 2191 1912 361 176 71 0 chr2 151120380 151120465 -99567389 + MER69 DNA AcHobo 2345 2435 -91 2934 225 65 73 chr2 151120473 151120832 -99567022 + HAL1 LINE L1 1090 1450 -1057 784 160 0 8 chr2 151120832 151120957 -99566897 + FLAM_C SINE Alu 1 124 -9 2934 225 65 73 chr2 151120957 151121814 -99566040 + HAL1 LINE L1 1450 2296 -211 1164 289 67 20 chr2 151123900 151124392 -99563462 + L1MEc LINE L1 210 724 -5839 186 43 0 0 chr2 151124393 151124416 -99563438 + (CAA)n Simple_repeat Simple_repeat 2 24 0 229 287 123 64 chr2 151124481 151124732 -99563122 + L1MEc LINE L1 1418 1683 -4701 7351 71 9 2 chr2 151174744 151175764 -99512090 + L1PA8 LINE L1 5146 6171 -1 2057 271 139 26 chr2 151175990 151176405 -99511449 - L2 LINE L2 -558 2756 2389 2015 132 3 20 chr2 151176405 151176709 -99511145 - AluSx SINE Alu -13 299 1 2057 271 139 26 chr2 151176709 151177244 -99510610 - L2 LINE L2 -925 2389 1699 3782 200 0 0 chr2 151177506 151178226 -99509628 - L1 LINE L1 -1862 4284 3565 185 289 0 0 chr2 151179047 151179092 -99508762 - MIR SINE MIR 0 262 218 245 128 0 0 chr2 151179236 151179275 -99508579 - MIR SINE MIR -61 201 163 194 350 41 94 chr2 151179302 151179642 -99508212 - L2 LINE L2 -37 3235 2914 517 230 59 0 chr2 151179754 151179889 -99507965 - MER112 DNA MER1_type -116 144 2 675 264 55 0 chr2 151180170 151180333 -99507521 + MER69A DNA AcHobo 4 175 -2 1764 100 74 22 chr2 151180409 151180679 -99507175 + AluSg SINE Alu 1 284 -26 235 319 25 25 chr2 151180727 151180884 -99506970 + L2 LINE L2 1303 1459 -1855 396 303 143 28 chr2 151181938 151182331 -99505523 + L2 LINE L2 1469 1906 -1408 1408 194 30 101 chr2 151182332 151182730 -99505124 - MLT1B LTR MaLR 0 390 21 467 293 122 120 chr2 151182770 151183289 -99504565 + L2 LINE L2 1903 2425 -889 2071 117 0 7 chr2 151183289 151183572 -99504282 - AluSq SINE Alu -32 281 1 467 293 122 120 chr2 151183572 151183858 -99503996 + L2 LINE L2 2425 2709 -605 2362 231 58 11 chr2 151184209 151184781 -99503073 + L1MC4 LINE L1 6450 7048 -994 1584 210 81 56 chr2 151184749 151185200 -99502654 + L1MC4 LINE L1 7289 7756 -286 * 1573 133 105 0 chr2 151185200 151185448 -99502406 + AluSx SINE Alu 23 296 -16 1584 210 81 56 chr2 151185448 151185515 -99502339 + L1MC4 LINE L1 7756 7820 -222 1565 254 41 78 chr2 151185542 151186097 -99501757 + MLT1E LTR MaLR 3 537 -56 358 135 0 0 chr2 151186259 151186311 -99501543 + MLT1E LTR MaLR 516 567 0 298 93 23 0 chr2 151186311 151186354 -99501500 + L1MC4 LINE L1 7857 7900 -142 536 322 112 40 chr2 151186411 151186935 -99500919 + L2 LINE L2 2706 3268 -4 216 175 0 0 chr2 151187438 151187478 -99500376 + (CAGAGA)n Simple_repeat Simple_repeat 2 41 0 45214 35 1 5 chr2 151188316 151194517 -99493337 + L1PA4 LINE L1 1 6176 0 346 254 212 0 chr2 151194886 151195004 -99492850 - L2 LINE L2 0 3313 3171 28724 128 19 67 chr2 151195055 151200378 -99487476 + L1P LINE L1 12 5081 -1065 345 282 0 0 chr2 151200520 151200598 -99487256 + MER58 DNA MER1_type 2343 2420 0 676 317 63 3 chr2 151200598 151200917 -99486937 - L2 LINE L2 -1687 1627 1290 232 250 14 14 chr2 151201252 151201324 -99486530 + L1ME LINE L1 5727 5798 -364 22 56 0 0 chr2 151201686 151201722 -99486132 + AT_rich Low_complexity Low_complexity 1 36 0 1018 152 0 45 chr2 151201787 151201831 -99486023 + AluJb SINE Alu 84 128 -184 189 0 0 0 chr2 151201831 151201852 -99486002 + (CA)n Simple_repeat Simple_repeat 2 22 0 1018 152 0 45 chr2 151201852 151202041 -99485813 + AluJb SINE Alu 128 286 -26 509 317 37 81 chr2 151202165 151202487 -99485367 + L2 LINE L2 2957 3264 -8 746 247 30 66 chr2 151203317 151203621 -99484233 + MLT1I LTR MaLR 98 390 -19 375 267 0 41 chr2 151204421 151204544 -99483310 + MIR3 SINE MIR 59 177 -31 589 261 110 71 chr2 151205416 151205953 -99481901 + L1ME4a LINE L1 5468 6025 -96 380 259 65 18 chr2 151206049 151206219 -99481635 + L1ME4a LINE L1 5721 5898 -223 594 252 32 101 chr2 151206765 151207043 -99480811 - MER112 DNA MER1_type -1 259 1 191 311 78 29 chr2 151207164 151207267 -99480587 + MIR SINE MIR 112 219 -43 216 319 56 4 chr2 151208903 151209064 -99478790 - MIR SINE MIR -7 255 25 911 133 12 0 chr2 151209208 151209373 -99478481 - L1MA7 LINE L1 0 6291 6125 669 207 23 51 chr2 151210593 151210810 -99477044 + L1MC4 LINE L1 7745 7955 -87 425 311 7 22 chr2 151210875 151211010 -99476844 + MER5B DNA MER1_type 43 175 -3 292 324 82 33 chr2 151211365 151211430 -99476424 - L1MC/D LINE L1 -482 5639 5699 216 0 0 0 chr2 151211430 151211454 -99476400 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 292 324 82 33 chr2 151211454 151211632 -99476222 - L1MC/D LINE L1 -421 5700 5532 195 313 52 21 chr2 151211713 151211809 -99476045 + MIR SINE MIR 28 126 -136 265 268 0 0 chr2 151211821 151211877 -99475977 - L2 LINE L2 -14 3258 3203 1363 262 28 14 chr2 151211882 151212310 -99475544 - LTR16A LTR ERVL 0 450 17 1496 317 70 55 chr2 151212325 151212681 -99475173 - L2 LINE L2 -71 3201 2852 2173 116 36 0 chr2 151212681 151212983 -99474871 + AluSp SINE Alu 1 313 0 1496 317 70 55 chr2 151212983 151214107 -99473747 - L2 LINE L2 -420 2852 1685 1935 163 3 3 chr2 151214267 151214573 -99473281 + AluJo SINE Alu 1 306 -6 207 0 0 0 chr2 151214590 151214613 -99473241 + (CA)n Simple_repeat Simple_repeat 1 23 0 267 186 81 105 chr2 151214832 151214918 -99472936 - MER5B DNA MER1_type -75 103 20 2496 87 0 0 chr2 151215338 151215650 -99472204 - AluSx SINE Alu 0 312 1 246 290 60 30 chr2 151216896 151216996 -99470858 + MIR3 SINE MIR 95 197 -11 21 0 0 0 chr2 151217540 151217561 -99470293 + AT_rich Low_complexity Low_complexity 1 21 0 1724 131 0 8 chr2 151217960 151218224 -99469630 + AluSc SINE Alu 37 298 0 1813 143 0 45 chr2 151218487 151218801 -99469053 + AluJo SINE Alu 5 304 -8 453 304 37 0 chr2 151220206 151220341 -99467513 + MIR SINE MIR 112 251 -11 215 267 0 0 chr2 151222577 151222622 -99465232 + MIR SINE MIR 105 149 -113 391 246 236 0 chr2 151222930 151223040 -99464814 + MER5A DNA MER1_type 25 160 -29 355 333 51 0 chr2 151223132 151223270 -99464584 + MIR SINE MIR 8 152 -110 25 0 0 0 chr2 151223355 151223380 -99464474 + AT_rich Low_complexity Low_complexity 1 25 0 504 0 0 0 chr2 151224802 151224858 -99462996 + (TG)n Simple_repeat Simple_repeat 2 57 0 305 244 47 0 chr2 151226700 151226786 -99461068 + MER103 DNA DNA 2 91 -75 5741 206 46 24 chr2 151228871 151231389 -99456465 - L1MD1 LINE L1 0 6636 4053 180 0 0 0 chr2 151231389 151231409 -99456445 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5741 206 46 24 chr2 151231409 151231746 -99456108 - L1MD1 LINE L1 -2583 4053 3725 254 115 66 0 chr2 151231775 151231836 -99456018 - L1MA7 LINE L1 -6 6285 6221 * 2315 229 33 29 chr2 151231833 151232650 -99455204 - L1MD1 LINE L1 -2987 3553 2734 5568 201 85 48 chr2 151232657 151233073 -99454781 - L1MD1 LINE L1 -3894 2646 2247 2260 121 0 0 chr2 151233073 151233371 -99454483 - AluSx SINE Alu -14 298 1 5568 201 85 48 chr2 151233371 151235295 -99452559 - L1MD1 LINE L1 -4293 2247 10 699 208 52 42 chr2 151235296 151235488 -99452366 - MER20 DNA MER1_type -25 194 1 186 279 0 88 chr2 151235525 151235593 -99452261 + L2 LINE L2 3188 3249 -23 1093 249 116 19 chr2 151235817 151236172 -99451682 + L1ME3A LINE L1 5572 6016 -154 1658 153 87 60 chr2 151236172 151236552 -99451302 - MLT1B LTR MaLR 0 390 1 1093 249 116 19 chr2 151236552 151236708 -99451146 + L1ME3A LINE L1 6016 6156 -14 2449 90 0 0 chr2 151237433 151237733 -99450121 + AluY SINE Alu 1 300 -11 309 259 0 0 chr2 151238155 151238236 -99449618 - L1MEc LINE L1 -4790 1606 1526 * 1180 252 152 15 chr2 151238233 151238824 -99449030 + L1ME3 LINE L1 5483 6154 -8 303 262 71 16 chr2 151238877 151239003 -99448851 + L1MEd LINE L1 19 151 -5968 294 335 21 68 chr2 151239073 151239354 -99448500 + L1MEd LINE L1 280 547 -5572 255 254 0 30 chr2 151239760 151239827 -99448027 - L3 LINE CR1 -373 1204 1140 22 0 0 0 chr2 151240573 151240595 -99447259 + AT_rich Low_complexity Low_complexity 1 22 0 212 139 23 0 chr2 151241195 151241238 -99446616 - L3 LINE CR1 -732 845 802 1303 174 43 112 chr2 151241571 151241963 -99445891 + MLT1A1 LTR MaLR 1 365 0 624 249 67 6 chr2 151242106 151242271 -99445583 + MER5B DNA MER1_type 4 178 0 318 333 40 0 chr2 151242544 151242643 -99445211 - MER5B DNA MER1_type -2 176 74 690 187 19 65 chr2 151242658 151242813 -99445041 + MER5A DNA MER1_type 42 189 0 2857 179 79 48 chr2 151244038 151244671 -99443183 + L1MD2 LINE L1 5572 6229 -130 2248 120 16 0 chr2 151244671 151244979 -99442875 - AluSq SINE Alu 0 313 1 2857 179 79 48 chr2 151244979 151245032 -99442822 + L1MD2 LINE L1 6229 6279 -80 539 221 77 0 chr2 151245032 151245136 -99442718 - FLAM_C SINE Alu -30 113 2 303 175 32 0 chr2 151245140 151245203 -99442651 + L1MD2 LINE L1 6292 6356 -3 274 169 15 31 chr2 151245274 151245339 -99442515 + MER116 DNA Mariner 1 64 -16 14052 136 27 20 chr2 151246549 151248768 -99439086 + Tigger1 DNA MER2_type 1 2240 -178 1872 147 3 0 chr2 151248768 151249060 -99438794 + AluJb SINE Alu 11 303 -9 14052 136 27 20 chr2 151249060 151249241 -99438613 + Tigger1 DNA MER2_type 2240 2418 0 23 33 0 0 chr2 151249315 151249345 -99438509 + AT_rich Low_complexity Low_complexity 1 30 0 2498 55 3 19 chr2 151251986 151252297 -99435557 + AluY SINE Alu 1 306 -5 282 279 13 0 chr2 151254015 151254094 -99433760 - MIR SINE MIR -8 254 175 371 364 38 8 chr2 151254254 151254386 -99433468 + L2 LINE L2 3128 3263 -9 331 281 26 59 chr2 151254547 151254725 -99433129 + MER5A DNA MER1_type 3 163 -15 491 222 314 0 chr2 151255874 151256068 -99431786 - MIR SINE MIR -5 257 3 2070 116 7 10 chr2 151256114 151256406 -99431448 + AluSq SINE Alu 5 295 -18 25 31 0 0 chr2 151257012 151257044 -99430810 + AT_rich Low_complexity Low_complexity 1 32 0 279 236 28 94 chr2 151257279 151257385 -99430469 - L2 LINE L2 -40 3232 3134 1628 154 106 6 chr2 151257694 151258044 -99429810 - MLT1B LTR MaLR 0 390 6 875 98 0 0 chr2 151258901 151259023 -99428831 + L1PA7 LINE L1 6033 6154 0 2300 148 53 12 chr2 151260594 151261226 -99426628 - L1M4 LINE L1 -385 5799 5141 2108 117 0 0 chr2 151262591 151262894 -99424960 + AluSx SINE Alu 1 303 0 854 269 67 35 chr2 151262899 151263402 -99424452 + MLT1G LTR MaLR 22 555 0 229 222 186 104 chr2 151263477 151263698 -99424156 - MLT1K LTR MaLR -19 569 331 271 366 13 36 chr2 151263760 151263984 -99423870 - MLT1K LTR MaLR -368 220 2 263 138 52 17 chr2 151264655 151264713 -99423141 + MLT1K LTR MaLR 509 568 -20 934 154 0 0 chr2 151265145 151265288 -99422566 - Tigger3(Golem) DNA MER2_type 0 3038 2896 368 224 0 0 chr2 151265286 151265353 -99422501 - Tigger3(Golem) DNA MER2_type -2952 77 11 * 280 430 59 7 chr2 151266196 151266468 -99421386 + L2 LINE L2 235 520 -2794 413 269 131 8 chr2 151268468 151268598 -99419256 + MIR SINE MIR 26 171 -91 521 170 0 19 chr2 151269095 151269201 -99418653 - MER103 DNA DNA -55 111 8 184 302 115 21 chr2 151269317 151269413 -99418441 - MIR SINE MIR -121 141 37 2084 159 7 22 chr2 151270061 151270469 -99417385 + L1MA8 LINE L1 5833 6234 -57 591 239 173 5 chr2 151270624 151270821 -99417033 + MIR SINE MIR 2 231 -31 22 35 0 0 chr2 151271293 151271322 -99416532 + AT_rich Low_complexity Low_complexity 1 29 0 184 167 0 0 chr2 151271347 151271377 -99416477 - MIR SINE MIR -3 259 230 346 206 0 0 chr2 151271382 151271455 -99416399 + MER116 DNA Mariner 7 79 -1 307 262 12 24 chr2 151271488 151271572 -99416282 - MIR SINE MIR -76 186 104 2108 101 25 4 chr2 151271579 151271855 -99415999 - AluSx SINE Alu -8 304 23 587 258 57 0 chr2 151271916 151272075 -99415779 - MER5B DNA MER1_type -4 174 7 235 287 82 40 chr2 151272636 151272768 -99415086 + MIR SINE MIR 3 138 -70 219 36 0 0 chr2 151273133 151273161 -99414693 + (CA)n Simple_repeat Simple_repeat 2 29 0 792 129 170 0 chr2 151273395 151273566 -99414288 + MER3 DNA MER1_type 5 204 -5 414 293 138 22 chr2 151273870 151274051 -99413803 - MIR SINE MIR -27 235 34 391 244 33 0 chr2 151275069 151275159 -99412695 - L2 LINE L2 0 3313 3221 476 358 12 4 chr2 151275694 151275951 -99411903 + ERVL LTR ERVL 3228 3486 -2278 * 570 321 42 59 chr2 151275937 151276949 -99410905 + ERVL LTR ERVL 4096 4988 -8 247 216 37 168 chr2 151276953 151277009 -99410845 + LTR16B LTR ERVL 204 266 -198 1823 148 0 48 chr2 151277009 151277320 -99410534 + AluJb SINE Alu 1 296 -16 247 216 37 168 chr2 151277320 151277453 -99410401 + LTR16B LTR ERVL 266 368 -96 392 303 67 6 chr2 151277872 151278050 -99409804 - Charlie8 DNA MER1_type -2157 260 72 304 373 42 14 chr2 151278311 151278453 -99409401 - L2 LINE L2 -6 3266 3121 344 300 117 23 chr2 151280624 151280931 -99406923 + L1MC/D LINE L1 5351 5686 -2122 782 143 130 19 chr2 151281765 151281926 -99405928 - MER5A DNA MER1_type 0 189 11 297 259 0 0 chr2 151282851 151282909 -99404945 - L2 LINE L2 -10 3262 3205 1011 174 5 0 chr2 151282918 151283113 -99404741 + L1PBa LINE L1 3 198 -6665 6319 120 35 1 chr2 151283118 151284703 -99403151 + L1PBa LINE L1 634 2424 -4439 37372 35 1 2 chr2 151284706 151290258 -99397596 + L1PA3 LINE L1 606 6152 -3 3532 98 35 7 chr2 151290233 151290731 -99397123 + L1PB1 LINE L1 5276 5796 -355 * 288 53 0 0 chr2 151290731 151290769 -99397085 + (CA)n Simple_repeat Simple_repeat 2 39 0 3532 98 35 7 chr2 151290769 151290846 -99397008 + L1PB1 LINE L1 5796 5869 -282 1036 44 52 0 chr2 151290846 151290981 -99396873 - L1PA8 LINE L1 -1 6171 6030 2144 79 3 7 chr2 151290984 151291275 -99396579 + L1PB1 LINE L1 5860 6149 -2 23 33 0 0 chr2 151291275 151291305 -99396549 + AT_rich Low_complexity Low_complexity 1 30 0 285 344 33 16 chr2 151291463 151291585 -99396269 - L2 LINE L2 -185 3087 2964 298 241 128 35 chr2 151291619 151291760 -99396094 + MLT1J LTR MaLR 25 178 -333 245 306 14 0 chr2 151291847 151291919 -99395935 + MLT1L LTR MaLR 200 272 -343 181 154 55 11 chr2 151293228 151293319 -99394535 + (TTTA)n Simple_repeat Simple_repeat 2 96 0 22 0 0 0 chr2 151293332 151293354 -99394500 + AT_rich Low_complexity Low_complexity 1 22 0 1293 211 57 6 chr2 151293418 151293769 -99394085 - Charlie4a DNA MER1_type -3 505 137 372 43 0 0 chr2 151294531 151294577 -99393277 + (CA)n Simple_repeat Simple_repeat 1 46 0 287 240 0 0 chr2 151295153 151295228 -99392626 + HAL1 LINE L1 1433 1507 -1000 277 319 65 0 chr2 151295511 151295649 -99392205 + MLT1J LTR MaLR 154 300 -249 361 230 157 28 chr2 151295673 151295851 -99392003 + MLT1F1 LTR MaLR 344 544 -23 1081 143 24 29 chr2 151295931 151296140 -99391714 - MER2 DNA MER2_type -134 211 4 555 273 0 0 chr2 151296161 151296293 -99391561 - MIR SINE MIR -58 204 73 493 308 40 14 chr2 151296749 151297217 -99390637 + L1M4 LINE L1 3510 3992 -2154 386 287 175 42 chr2 151297565 151297948 -99389906 + L1M4 LINE L1 4579 5012 -1134 28 61 0 0 chr2 151298443 151298492 -99389362 + AT_rich Low_complexity Low_complexity 1 49 0 2059 117 3 10 chr2 151299956 151300247 -99387607 - AluSg SINE Alu -21 289 1 1612 197 18 37 chr2 151300688 151301069 -99386785 + MLT1A2 LTR MaLR 1 374 0 190 271 163 47 chr2 151302004 151302133 -99385721 + MIR SINE MIR 119 262 0 189 171 0 0 chr2 151304796 151304831 -99383023 + GA-rich Low_complexity Low_complexity 3 37 0 233 351 106 24 chr2 151305310 151305518 -99382336 + L2 LINE L2 3043 3267 -5 272 290 0 0 chr2 151307135 151307204 -99380650 + CT-rich Low_complexity Low_complexity 2 70 0 246 296 0 0 chr2 151307834 151307907 -99379947 + GA-rich Low_complexity Low_complexity 2 125 0 2531 43 0 0 chr2 151307956 151308259 -99379595 + L1PA3 LINE L1 5850 6152 -3 25 0 0 0 chr2 151308259 151308284 -99379570 + AT_rich Low_complexity Low_complexity 1 25 0 280 306 135 9 chr2 151308872 151308983 -99378871 - L2 LINE L2 -10 3262 3138 636 122 99 0 chr2 151309819 151309950 -99377904 + L1MB4 LINE L1 6036 6179 -1 206 269 103 13 chr2 151311131 151311209 -99376645 + MIR SINE MIR 32 116 -92 4134 259 107 29 chr2 151311337 151313239 -99374615 + L2 LINE L2 1282 3312 -1 1893 164 0 3 chr2 151314573 151314860 -99372994 + AluJb SINE Alu 1 286 -26 222 292 123 0 chr2 151314997 151315062 -99372792 + L2 LINE L2 3171 3243 -29 2055 125 4 0 chr2 151315211 151315492 -99372362 - AluSx SINE Alu -30 282 1 183 156 0 0 chr2 151315773 151315805 -99372049 + A-rich Low_complexity Low_complexity 1 32 0 372 156 52 13 chr2 151316401 151316478 -99371376 - MIR SINE MIR -64 198 119 188 245 19 19 chr2 151318451 151318504 -99369350 - L2 LINE L2 -5 3308 3256 1354 286 181 12 chr2 151319265 151320032 -99367822 + L2 LINE L2 1851 2747 -567 511 262 103 9 chr2 151320119 151320332 -99367522 - L1ME1 LINE L1 -36 6130 5907 460 211 0 11 chr2 151321816 151321906 -99365948 + AluJb SINE Alu 192 280 -32 1253 144 10 34 chr2 151322021 151322229 -99365625 - AluJo SINE Alu -25 287 85 1558 179 37 64 chr2 151322291 151322666 -99365188 - MLT1A1 LTR MaLR 0 365 1 220 354 143 16 chr2 151323947 151324317 -99363537 + L2 LINE L2 2262 2678 -636 1048 142 25 0 chr2 151324439 151324601 -99363253 - FRAM SINE Alu -11 165 1 378 300 54 124 chr2 151324605 151325015 -99362839 + L2 LINE L2 2836 3216 -56 1235 200 185 20 chr2 151325447 151325906 -99361948 + MLT1E LTR MaLR 12 593 0 579 164 69 0 chr2 151327122 151327238 -99360616 + MER106B DNA MER1_type 28 151 -908 467 78 0 0 chr2 151327237 151327301 -99360553 + U2 snRNA snRNA 2 65 -123 * 21 0 0 0 chr2 151327321 151327342 -99360512 + AT_rich Low_complexity Low_complexity 1 21 0 216 363 67 34 chr2 151327565 151327744 -99360110 + MIR SINE MIR 28 212 -50 381 236 0 0 chr2 151328148 151328243 -99359611 + L1ME LINE L1 5497 5591 -530 254 317 67 56 chr2 151329241 151329421 -99358433 - MIR SINE MIR -33 229 48 721 279 88 9 chr2 151329521 151329736 -99358118 + MIR SINE MIR 25 256 -6 1194 222 78 122 chr2 151329830 151330092 -99357762 + MER39 LTR ERV1 1 273 -434 1681 204 60 24 chr2 151330092 151330474 -99357380 + MSTD LTR MaLR 1 396 0 1194 222 78 122 chr2 151330474 151330778 -99357076 + MER39 LTR ERV1 273 707 0 2092 167 86 47 chr2 151330779 151331265 -99356589 - MLT1D LTR MaLR 0 505 1 3017 143 38 0 chr2 151331493 151332019 -99355835 + MER34C LTR ERV1 39 584 -1 187 388 112 40 chr2 151332097 151332560 -99355294 - L2 LINE L2 -411 2903 2396 4172 134 2 2 chr2 151332560 151333195 -99354659 + MER41B LTR ERV1 1 635 0 187 388 112 40 chr2 151333195 151333259 -99354595 - L2 LINE L2 -918 2396 2338 369 279 62 62 chr2 151333326 151333487 -99354367 + MIR3 SINE MIR 20 180 -28 203 211 0 0 chr2 151333638 151333676 -99354178 - MIR SINE MIR -7 255 218 183 250 0 62 chr2 151334126 151334190 -99353664 - MER5B DNA MER1_type -30 148 89 28 29 0 0 chr2 151334302 151334337 -99353517 + AT_rich Low_complexity Low_complexity 1 35 0 2333 112 0 6 chr2 151334905 151335219 -99352635 + AluSx SINE Alu 1 312 0 26 50 0 0 chr2 151337920 151337960 -99349894 + AT_rich Low_complexity Low_complexity 1 40 0 2191 123 0 0 chr2 151338485 151338778 -99349076 + AluSg SINE Alu 1 293 -17 209 322 35 35 chr2 151340063 151340150 -99347704 + L2 LINE L2 3004 3090 -182 931 223 0 5 chr2 151340204 151340401 -99347453 - MER58A DNA MER1_type -1 223 28 304 273 213 0 chr2 151340418 151340568 -99347286 - L3 LINE CR1 -68 1509 1328 449 191 0 0 chr2 151340681 151340765 -99347089 - L3 LINE CR1 -253 1324 1241 23 0 0 0 chr2 151341373 151341396 -99346458 + AT_rich Low_complexity Low_complexity 1 23 0 2232 132 3 0 chr2 151341567 151341878 -99345976 - AluSx SINE Alu 0 312 1 680 202 40 61 chr2 151342226 151342424 -99345430 - MER3 DNA MER1_type -14 195 2 1904 259 105 33 chr2 151343734 151344774 -99343080 + L2 LINE L2 2170 3257 -56 203 306 65 0 chr2 151344774 151344836 -99343018 + L2 LINE L2 3221 3286 -27 1059 90 0 0 chr2 151344924 151345057 -99342797 - AluSq/x SINE Alu -180 133 1 648 171 76 38 chr2 151345625 151345783 -99342071 + MLT1A1 LTR MaLR 11 174 -191 192 179 0 0 chr2 151345788 151345827 -99342027 + CT-rich Low_complexity Low_complexity 2 40 0 370 211 104 50 chr2 151345829 151345982 -99341872 + MLT1B LTR MaLR 194 322 -68 2383 70 0 3 chr2 151345992 151346290 -99341564 + AluSc SINE Alu 1 297 -12 21 57 0 0 chr2 151346782 151346817 -99341037 + AT_rich Low_complexity Low_complexity 1 35 0 2209 97 0 29 chr2 151347376 151347684 -99340170 + AluY SINE Alu 1 299 -12 918 207 12 0 chr2 151347917 151348086 -99339768 - FAM SINE Alu -2 173 3 247 229 17 59 chr2 151348949 151349067 -99338787 - MER103 DNA DNA 0 166 54 229 318 15 15 chr2 151349173 151349239 -99338615 - MIR SINE MIR -76 132 67 695 143 56 8 chr2 151350671 151350797 -99337057 + MSTB LTR MaLR 1 132 -294 1135 200 89 51 chr2 151351053 151351403 -99336451 + MLT1A1 LTR MaLR 1 363 -2 197 353 17 43 chr2 151351634 151351750 -99336104 - L2 LINE L2 -214 3058 2946 310 276 20 10 chr2 151352313 151352411 -99335443 - MIR3 SINE MIR -48 160 62 297 269 19 10 chr2 151352422 151352531 -99335323 - MIR SINE MIR -102 106 2 22 0 0 0 chr2 151352800 151352822 -99335032 + AT_rich Low_complexity Low_complexity 1 22 0 1793 201 61 0 chr2 151354242 151354586 -99333268 - MLT1A1 LTR MaLR 0 365 1 4415 103 13 38 chr2 151354661 151355351 -99332503 + L1PA15 LINE L1 5480 6152 -13 287 308 0 69 chr2 151355749 151355879 -99331975 - L2 LINE L2 -2 3270 3150 288 0 0 0 chr2 151356030 151356062 -99331792 + (CA)n Simple_repeat Simple_repeat 2 33 0 458 202 67 17 chr2 151356249 151356368 -99331486 - L1ME4a LINE L1 -22 6099 5975 6794 128 47 18 chr2 151356979 151358174 -99329680 - Tigger3b DNA MER2_type -1 1230 1 372 248 147 0 chr2 151359294 151359403 -99328451 + L2 LINE L2 3189 3313 0 389 328 49 0 chr2 151359406 151359528 -99328326 - MIR SINE MIR -86 176 49 277 244 73 2 chr2 151360378 151360464 -99327390 + MIR SINE MIR 76 166 -42 25 31 0 0 chr2 151362472 151362504 -99325350 + GC_rich Low_complexity Low_complexity 1 32 0 399 215 74 21 chr2 151364103 151364233 -99323621 + L1ME4a LINE L1 1206 6077 -2 474 95 27 0 chr2 151364895 151364969 -99322885 - Alu SINE Alu -2 310 235 22 0 0 0 chr2 151365024 151365046 -99322808 + AT_rich Low_complexity Low_complexity 1 22 0 1738 126 78 14 chr2 151365196 151365489 -99322365 - AluSx SINE Alu 0 312 1 655 93 52 0 chr2 151365544 151365641 -99322213 - L1PB3 LINE L1 -2 6152 6051 299 257 14 14 chr2 151365824 151365894 -99321960 + L2 LINE L2 3200 3269 -3 22 56 0 0 chr2 151366149 151366185 -99321669 + AT_rich Low_complexity Low_complexity 1 36 0 1613 213 31 16 chr2 151366205 151366731 -99321123 + L1ME LINE L1 5104 5637 -529 8699 140 39 13 chr2 151366735 151368139 -99319715 + Tigger1 DNA MER2_type 1 1440 -978 2593 54 42 3 chr2 151368139 151368470 -99319384 - LTR14A LTR ERVK 0 344 1 756 78 0 43 chr2 151368473 151368589 -99319265 - HERVK14 LTR ERVK 0 5945 5835 353 166 0 20 chr2 151368589 151368659 -99319195 - MER41C LTR ERV1 -493 61 6 8228 52 33 7 chr2 151368659 151369682 -99318172 - HERVK14 LTR ERVK -181 5764 4715 * 12186 48 11 0 chr2 151369678 151371120 -99316734 - HERVK14 LTR ERVK -2660 3285 1828 2452 85 14 34 chr2 151372774 151372812 -99315042 - HERVK14 LTR ERVK -5583 362 325 8434 33 6 1 chr2 151372812 151374584 -99313270 + L1PA4 LINE L1 4379 6155 0 2452 85 14 34 chr2 151374584 151374898 -99312956 - HERVK14 LTR ERVK -5620 325 17 188 322 0 17 chr2 151374903 151374962 -99312892 + L2 LINE L2 3255 3312 -1 226 297 27 54 chr2 151374976 151375087 -99312767 + MARNA DNA Mariner 32 139 -447 * 291 254 44 53 chr2 151374989 151375103 -99312751 - MARNA DNA Mariner -43 543 431 230 234 37 75 chr2 151376083 151376190 -99311664 + MER117 DNA MER1_type 5 107 -90 279 356 74 7 chr2 151376204 151376339 -99311515 - L2 LINE L2 -957 2357 2214 229 69 0 0 chr2 151376502 151376531 -99311323 - HSMAR1 DNA Mariner 0 1287 1259 731 180 7 14 chr2 151376712 151376851 -99311003 - L1M3e LINE L1 -6892 138 1 921 214 87 15 chr2 151376864 151377130 -99310724 + MER110 LTR ERV1 3 287 -204 1547 201 0 7 chr2 151428483 151428767 -99259087 + AluJb SINE Alu 1 282 -30 183 143 36 18 chr2 151428769 151428825 -99259029 + (TA)n Simple_repeat Simple_repeat 2 58 0 180 0 0 0 chr2 151428827 151428847 -99259007 + (TG)n Simple_repeat Simple_repeat 1 20 0 367 310 80 0 chr2 151428874 151428987 -99258867 - MER5A DNA MER1_type -66 123 2 264 182 52 52 chr2 151428995 151429072 -99258782 - MIR SINE MIR -110 152 76 979 268 22 0 chr2 151429095 151429371 -99258483 - L1M4 LINE L1 -3022 3124 2843 1111 193 5 14 chr2 151429373 151429591 -99258263 - L1MEc LINE L1 -6138 258 43 239 259 247 0 chr2 151429774 151429855 -99257999 + L2 LINE L2 3159 3259 -13 185 65 32 0 chr2 151430150 151430181 -99257673 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 484 211 0 32 chr2 151431383 151431478 -99256376 + MER21B LTR ERV1 1 92 -771 2191 246 92 44 chr2 151431493 151432250 -99255604 + MER21B LTR ERV1 16 809 -54 384 358 0 0 chr2 151435578 151435726 -99252128 - MIR SINE MIR 0 262 115 1599 173 33 16 chr2 151435817 151436124 -99251730 + AluJo SINE Alu 1 312 0 713 174 0 50 chr2 151436298 151436419 -99251435 - FRAM SINE Alu -69 107 1 1830 147 41 0 chr2 151437715 151438008 -99249846 - AluSg SINE Alu -5 305 1 258 348 0 80 chr2 151438132 151438270 -99249584 - L2 LINE L2 -1 3271 3145 271 292 97 18 chr2 151438489 151438602 -99249252 + LTR33 LTR ERVL 38 159 -362 475 259 74 0 chr2 151438722 151438884 -99248970 + LTR33 LTR ERVL 348 521 0 11212 183 76 10 chr2 151438955 151443524 -99244330 + L1PBa LINE L1 221 5091 -1771 377 263 84 44 chr2 151444332 151444538 -99243316 + MLT1L LTR MaLR 99 391 -201 617 331 189 12 chr2 151444902 151445404 -99242450 + L2 LINE L2 1000 1590 -1724 441 206 147 88 chr2 151445397 151445567 -99242287 + MER5A DNA MER1_type 9 188 -1 * 392 279 124 48 chr2 151445578 151445893 -99241961 + L2 LINE L2 1580 1918 -1396 1390 230 101 20 chr2 151445895 151446377 -99241477 + MER39 LTR ERV1 6 707 0 1574 309 130 32 chr2 151446419 151447576 -99240278 + L2 LINE L2 1973 3236 -77 180 0 0 0 chr2 151447658 151447678 -99240176 + (CAA)n Simple_repeat Simple_repeat 1 20 0 335 357 14 0 chr2 151448246 151448389 -99239465 - MIR SINE MIR -20 242 98 466 114 13 38 chr2 151448454 151448533 -99239321 - MADE1 DNA Mariner 0 80 4 708 299 66 49 chr2 151449108 151449533 -99238321 - MLT1K LTR MaLR 0 588 157 221 349 51 42 chr2 151451510 151451725 -99236129 + L2 LINE L2 2545 2761 -553 188 170 21 21 chr2 151451827 151451874 -99235980 + L2 LINE L2 3255 3301 -12 375 310 18 0 chr2 151452094 151452207 -99235647 - LTR16C LTR ERVL -233 258 144 526 329 39 83 chr2 151452559 151452945 -99234909 - HERV16 LTR ERVL -2271 2725 2357 1456 115 64 98 chr2 151453400 151453696 -99234158 - AluJb SINE Alu -12 300 15 996 287 92 30 chr2 151455236 151455727 -99232127 - LTR33 LTR ERVL 0 521 1 343 268 81 24 chr2 151455972 151456095 -99231759 - L2 LINE L2 -4 3268 3139 7924 40 0 0 chr2 151456667 151457655 -99230199 - L1PA4 LINE L1 -3 6152 5165 250 179 60 111 chr2 151457776 151457893 -99229961 + LTR16A1 LTR ERVL 1 111 -346 341 319 22 30 chr2 151458599 151458734 -99229120 - MIR SINE MIR -75 187 54 2259 77 24 7 chr2 151460056 151460353 -99227501 + AluSx SINE Alu 1 302 -10 197 84 0 84 chr2 151460886 151460957 -99226897 + (TTTTTG)n Simple_repeat Simple_repeat 3 67 0 2188 104 0 46 chr2 151461064 151461391 -99226463 + AluSx SINE Alu 1 312 0 22 56 0 0 chr2 151462111 151462147 -99225707 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr2 151463907 151463932 -99223922 + AT_rich Low_complexity Low_complexity 1 25 0 572 279 92 25 chr2 151465284 151465524 -99222330 - MIR SINE MIR -6 256 1 21 36 0 0 chr2 151465891 151465919 -99221935 + AT_rich Low_complexity Low_complexity 1 28 0 2630 33 0 10 chr2 151466031 151466338 -99221516 + AluY SINE Alu 1 304 -7 545 273 12 18 chr2 151467864 151468029 -99219825 + MIR SINE MIR 78 241 -21 768 255 127 15 chr2 151468439 151468698 -99219156 - L2 LINE L2 -5 3308 3021 3025 163 48 5 chr2 151468702 151469311 -99218543 - MER73 LTR ERVL 0 644 10 1666 254 157 18 chr2 151469311 151469968 -99217886 - L2 LINE L2 -298 3015 2269 1002 254 83 43 chr2 151469975 151470612 -99217242 + L1M3 LINE L1 4817 5485 -683 3751 122 54 9 chr2 151470612 151471258 -99216596 - L1MA3 LINE L1 0 6305 5631 1002 254 83 43 chr2 151471258 151471277 -99216577 + L1M3 LINE L1 5485 5502 -666 * 7687 155 14 1 chr2 151471265 151472566 -99215288 - L1M1 LINE L1 -602 5703 4421 221 0 0 33 chr2 151472566 151472596 -99215258 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 2115 122 4 0 chr2 151472598 151472877 -99214977 - AluSx SINE Alu -32 280 1 7687 155 14 1 chr2 151472877 151473376 -99214478 - L1M1 LINE L1 -1884 4421 3874 1325 234 10 33 chr2 151473427 151473824 -99214030 + L1ME2 LINE L1 5722 6109 -55 2907 141 12 14 chr2 151474647 151475166 -99212688 - L1MA9 LINE L1 0 6312 5795 23 33 0 0 chr2 151475362 151475392 -99212462 + AT_rich Low_complexity Low_complexity 1 30 0 1532 219 59 11 chr2 151476172 151476529 -99211325 + MLT1A2 LTR MaLR 1 374 0 539 286 93 44 chr2 151476591 151476839 -99211015 + MIR SINE MIR 2 261 -1 300 242 221 40 chr2 151476938 151477087 -99210767 + MIR3 SINE MIR 9 184 -24 325 277 131 8 chr2 151477511 151477641 -99210213 - MIR SINE MIR 0 262 117 881 102 14 14 chr2 151477653 151477800 -99210054 + L1MA3 LINE L1 6152 6298 -7 277 205 148 66 chr2 151482153 151482275 -99205579 + LTR33A LTR ERVL 4 135 -388 481 221 0 9 chr2 151482364 151482477 -99205377 + LTR33A LTR ERVL 405 516 -7 1072 198 22 11 chr2 151482969 151483237 -99204617 + L1MB2 LINE L1 5133 5403 -743 15573 134 21 104 chr2 151483252 151486977 -99200877 + L1P LINE L1 12 3429 -2717 15843 91 6 0 chr2 151486977 151490044 -99197810 + L1PA7 LINE L1 3058 6154 0 3467 179 22 21 chr2 151490079 151490852 -99197002 + L1MB2 LINE L1 5397 6170 -1 299 301 107 0 chr2 151491187 151491198 -99196656 + MIR SINE MIR 32 40 -222 2267 109 0 0 chr2 151491198 151491491 -99196363 + AluSx SINE Alu 3 295 -17 299 301 107 0 chr2 151491491 151491582 -99196272 + MIR SINE MIR 40 145 -117 302 330 61 0 chr2 151492418 151492533 -99195321 + MIR SINE MIR 101 222 -40 1565 239 55 40 chr2 151493281 151493830 -99194024 + L1ME3A LINE L1 5609 6165 -5 1229 262 82 24 chr2 151493867 151494321 -99193533 + MER74B LTR ERVL 69 548 -74 252 0 0 0 chr2 151495213 151495241 -99192613 + (A)n Simple_repeat Simple_repeat 1 28 0 316 302 43 9 chr2 151495574 151495690 -99192164 - MIR SINE MIR 0 262 143 245 317 0 0 chr2 151497017 151497077 -99190777 + polypurine Low_complexity Low_complexity 3 62 0 555 239 161 44 chr2 151497157 151497362 -99190492 + L2 LINE L2 3082 3310 -3 280 328 45 8 chr2 151497671 151497805 -99190049 + L1ME LINE L1 5407 5545 -576 21 0 0 0 chr2 151498828 151498849 -99189005 + AT_rich Low_complexity Low_complexity 1 21 0 4190 94 36 23 chr2 151499255 151499802 -99188052 - L1PB2 LINE L1 -1 6150 5592 2694 10 0 3 chr2 151499802 151500100 -99187754 - AluY SINE Alu -14 297 1 4190 94 36 23 chr2 151500100 151500198 -99187656 - L1PB2 LINE L1 -559 5592 5497 431 269 9 0 chr2 151500198 151500306 -99187548 + MER94 DNA DNA 26 134 0 297 242 0 0 chr2 151500388 151500454 -99187400 - MLT1L LTR MaLR -549 66 1 3140 113 17 2 chr2 151500734 151501214 -99186640 - LTR15 LTR ERV1 -6 487 1 1940 153 3 0 chr2 151502263 151502551 -99185303 - AluJo SINE Alu -23 289 1 282 361 104 7 chr2 151504678 151504822 -99183032 + L2 LINE L2 3106 3263 -9 266 266 113 16 chr2 151504940 151505064 -99182790 + LTR16A LTR ERVL 314 449 -1 971 238 55 17 chr2 151505116 151505406 -99182448 + L2 LINE L2 3012 3312 -1 2201 119 0 13 chr2 151506255 151506558 -99181296 - AluSx SINE Alu -13 299 1 6101 99 47 4 chr2 151506967 151507966 -99179888 - L1PB2 LINE L1 -1 6150 5139 384 291 43 0 chr2 151508010 151508151 -99179703 - L1MEc LINE L1 -4610 1786 1640 4516 167 40 5 chr2 151508244 151508602 -99179252 - L1PB2 LINE L1 -2 6149 5805 423 0 0 0 chr2 151508602 151508649 -99179205 + (TA)n Simple_repeat Simple_repeat 1 47 0 4516 167 40 5 chr2 151508649 151510003 -99177851 - L1PB2 LINE L1 -346 5805 4380 1365 101 0 39 chr2 151511040 151511248 -99176606 + THE1B LTR MaLR 1 200 -164 237 313 12 0 chr2 151511486 151511569 -99176285 + CT-rich Low_complexity Low_complexity 2 85 0 181 212 0 0 chr2 151511696 151511729 -99176125 - L2 LINE L2 -339 2975 2943 204 135 0 0 chr2 151512671 151512708 -99175146 + (TC)n Simple_repeat Simple_repeat 2 38 0 323 185 15 0 chr2 151513028 151513093 -99174761 + LTR16C LTR ERVL 426 491 0 326 296 0 0 chr2 151513439 151513527 -99174327 + (CA)n Simple_repeat Simple_repeat 1 88 0 2188 148 56 0 chr2 151514114 151514491 -99173363 - MER57A LTR ERV1 -4 399 2 1719 146 70 59 chr2 151519915 151520286 -99167568 - THE1C LTR MaLR 0 375 1 209 273 55 0 chr2 151520890 151520945 -99166909 - L2 LINE L2 -1 3312 3255 201 266 43 93 chr2 151521129 151521268 -99166586 + MIR SINE MIR 21 152 -56 232 248 135 71 chr2 151522305 151522446 -99165408 + MER5A DNA MER1_type 26 175 -14 186 43 0 0 chr2 151522762 151522785 -99165069 + (TAAAA)n Simple_repeat Simple_repeat 4 26 0 220 291 87 36 chr2 151523644 151523763 -99164091 + MER5A DNA MER1_type 17 130 -48 800 177 134 0 chr2 151523860 151524024 -99163830 - MER5A DNA MER1_type 0 189 4 223 327 62 44 chr2 151524207 151524320 -99163534 + MER5A DNA MER1_type 74 188 -1 278 179 30 0 chr2 151524355 151524422 -99163432 - MER53 DNA DNA -102 87 19 1099 238 0 0 chr2 151525222 151525445 -99162409 - MER58A DNA MER1_type -1 223 1 612 174 31 122 chr2 151527462 151527658 -99160196 - MER5B DNA MER1_type 0 178 1 2499 58 3 16 chr2 151528944 151529257 -99158597 - AluY SINE Alu -2 309 1 522 280 120 18 chr2 151529786 151530011 -99157843 - MIR SINE MIR 0 262 15 2621 131 41 2 chr2 151530060 151530472 -99157382 + MSTA LTR MaLR 1 428 0 821 308 79 12 chr2 151531911 151532463 -99155391 + L2 LINE L2 2480 3064 -249 373 225 45 0 chr2 151532473 151532562 -99155292 - L2 LINE L2 0 3313 3221 234 311 0 16 chr2 151533404 151533465 -99154389 + MIR SINE MIR 33 92 -170 25 0 0 0 chr2 151533478 151533503 -99154351 + AT_rich Low_complexity Low_complexity 1 25 0 539 239 139 0 chr2 151534503 151534741 -99153113 + L1ME4a LINE L1 5835 6105 -16 252 219 0 31 chr2 151534908 151534972 -99152882 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 180 320 0 0 chr2 151535063 151535113 -99152741 - MER5A DNA MER1_type -4 185 136 580 258 56 56 chr2 151537015 151537248 -99150606 + MIR SINE MIR 20 252 -10 537 381 18 0 chr2 151538057 151538275 -99149579 + MIR SINE MIR 19 240 -22 513 198 86 9 chr2 151538370 151538486 -99149368 + MIR SINE MIR 91 215 -47 606 267 172 55 chr2 151538617 151539084 -99148770 - L2 LINE L2 0 3313 2777 29 28 0 0 chr2 151541621 151541657 -99146197 + AT_rich Low_complexity Low_complexity 1 36 0 254 193 53 0 chr2 151541927 151541984 -99145870 + L3 LINE CR1 924 983 -594 228 385 0 8 chr2 151542255 151542377 -99145477 + L3 LINE CR1 984 1104 -473 299 253 0 72 chr2 151542380 151542463 -99145391 + L3 LINE CR1 1498 1574 -3 2342 98 3 7 chr2 151543016 151543322 -99144532 + AluSg SINE Alu 6 310 0 2418 85 0 0 chr2 151543826 151544121 -99143733 - AluSc SINE Alu -14 295 1 378 281 79 34 chr2 151545361 151545539 -99142315 + MIR SINE MIR 7 192 -70 1032 253 134 29 chr2 151546524 151546978 -99140876 + LTR33 LTR ERVL 16 517 -4 254 255 38 28 chr2 151548669 151548775 -99139079 - MIR SINE MIR -68 194 88 22 0 0 0 chr2 151548911 151548933 -99138921 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 151549667 151549696 -99138158 + AT_rich Low_complexity Low_complexity 1 29 0 234 316 87 28 chr2 151549771 151549989 -99137865 + L1MC4a LINE L1 4754 4984 -1162 23 0 0 0 chr2 151550030 151550053 -99137801 + AT_rich Low_complexity Low_complexity 1 23 0 366 240 97 38 chr2 151550056 151550323 -99137531 + L1MC5 LINE L1 7631 7913 -48 356 278 59 48 chr2 151550350 151550537 -99137317 + L1MC4a LINE L1 5052 5240 -906 900 270 84 29 chr2 151550555 151551033 -99136821 + L1MC4a LINE L1 5255 5758 -2050 219 188 0 0 chr2 151551046 151551094 -99136760 + (CA)n Simple_repeat Simple_repeat 1 48 0 329 305 62 15 chr2 151551123 151551382 -99136472 + L1MC4a LINE L1 5908 6178 -1630 351 113 0 0 chr2 151551957 151552010 -99135844 + (TA)n Simple_repeat Simple_repeat 1 53 0 498 221 110 37 chr2 151552417 151552580 -99135274 + MIR SINE MIR 83 257 -5 1408 120 36 13 chr2 151553491 151553716 -99134138 - MER30 DNA MER1_type 0 230 1 253 208 0 0 chr2 151553737 151553785 -99134069 - L2 LINE L2 0 3313 3266 2679 113 133 0 chr2 151554150 151554609 -99133245 - Tigger1 DNA MER2_type 0 2418 1899 768 168 0 0 chr2 151554609 151554722 -99133132 + AluJb SINE Alu 162 274 -38 207 0 0 0 chr2 151554730 151554753 -99133101 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6148 128 12 0 chr2 151554756 151555714 -99132140 - Tigger1 DNA MER2_type -1448 970 1 228 244 227 50 chr2 151556251 151556370 -99131484 + L2 LINE L2 3132 3271 -1 2274 90 24 0 chr2 151557153 151557442 -99130412 - AluSp SINE Alu -17 296 1 301 232 14 0 chr2 151557472 151557541 -99130313 - L1MC4 LINE L1 -1339 6703 6634 232 358 97 0 chr2 151557544 151557678 -99130176 - L2 LINE L2 -1 3312 3166 22 35 0 0 chr2 151559179 151559208 -99128646 + AT_rich Low_complexity Low_complexity 1 29 0 394 282 56 66 chr2 151559225 151559438 -99128416 - MIR SINE MIR -50 212 2 235 212 59 35 chr2 151560370 151560455 -99127399 - MIR3 SINE MIR -48 160 74 21 57 0 0 chr2 151561376 151561411 -99126443 + AT_rich Low_complexity Low_complexity 1 35 0 253 230 24 139 chr2 151563299 151563464 -99124390 + MIR SINE MIR 107 252 -10 7611 122 47 16 chr2 151565073 151566266 -99121588 + Tigger3b DNA MER2_type 1 1230 -1 225 0 0 0 chr2 151566266 151566291 -99121563 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 351 0 0 0 chr2 151566290 151566329 -99121525 + (GA)n Simple_repeat Simple_repeat 2 40 0 1362 81 32 5 chr2 151566392 151566577 -99121277 - L1PA11 LINE L1 0 6174 5985 5831 120 14 0 chr2 151566577 151567438 -99120416 + L1P LINE L1 3759 4631 -1515 837 287 169 57 chr2 151567558 151568119 -99119735 + L3 LINE CR1 272 895 -682 1532 195 89 91 chr2 151568255 151568737 -99119117 - MLT2B1 LTR ERVL 0 520 40 2734 105 24 11 chr2 151568991 151569361 -99118493 + THE1C LTR MaLR 1 375 0 1834 158 23 7 chr2 151573114 151573418 -99114436 - AluSx SINE Alu -3 309 1 207 0 0 0 chr2 151573433 151573456 -99114398 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 351 100 0 0 chr2 151574906 151574956 -99112898 - MIR SINE MIR -116 146 97 954 241 27 5 chr2 151575568 151575792 -99112062 + MIR SINE MIR 8 236 -26 1689 190 89 68 chr2 151575977 151576488 -99111366 + MLT1H LTR MaLR 1 409 0 803 228 72 77 chr2 151577021 151577566 -99110288 + LTR48 LTR ERV1 1 739 -4 810 252 10 19 chr2 151578918 151579124 -99108730 + MIR SINE MIR 49 252 -10 912 193 12 31 chr2 151581187 151581348 -99106506 - FRAM SINE Alu -21 155 1 2062 191 26 52 chr2 151581348 151581727 -99106127 + MLT2D LTR ERVL 1 369 -45 366 23 0 0 chr2 151581727 151581770 -99106084 + (CA)n Simple_repeat Simple_repeat 2 44 0 2062 191 26 52 chr2 151581770 151581814 -99106040 + MLT2D LTR ERVL 369 413 -1 2720 131 2 7 chr2 151582645 151583064 -99104790 - L1MB4 LINE L1 0 6180 5764 2045 132 39 49 chr2 151584539 151584925 -99102929 + MLT1B LTR MaLR 1 382 -8 243 303 67 59 chr2 151586434 151586553 -99101301 + L2 LINE L2 3137 3256 -16 207 69 0 0 chr2 151586652 151586681 -99101173 + (CACCC)n Simple_repeat Simple_repeat 3 31 0 1333 202 60 38 chr2 151586823 151587189 -99100665 - MLT1C LTR MaLR 0 467 94 2259 103 3 3 chr2 151587556 151587858 -99099996 - AluSc SINE Alu -7 302 1 384 257 23 15 chr2 151588602 151588782 -99099072 + MER41B LTR ERV1 114 428 -207 252 282 35 12 chr2 151589008 151589093 -99098761 + L2 LINE L2 3184 3270 -2 302 329 105 0 chr2 151589404 151589556 -99098298 - L2 LINE L2 -457 2857 2690 224 214 0 0 chr2 151589575 151589617 -99098237 + MER5B DNA MER1_type 11 52 -126 1596 263 189 54 chr2 151589692 151590857 -99096997 + HAL1 LINE L1 236 1641 -866 198 0 0 0 chr2 151590857 151590879 -99096975 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1596 263 189 54 chr2 151590879 151591178 -99096676 + HAL1 LINE L1 1641 1898 -609 447 263 27 28 chr2 151591209 151591496 -99096358 + HAL1 LINE L1 2036 2407 -100 587 89 13 0 chr2 151592130 151592209 -99095645 + MADE1 DNA Mariner 1 80 0 327 233 256 16 chr2 151592591 151592720 -99095134 + Charlie8 DNA MER1_type 2 161 -2256 199 286 88 0 chr2 151592969 151593060 -99094794 - L3b LINE CR1 -379 1204 1106 315 0 0 0 chr2 151593411 151593446 -99094408 + (CA)n Simple_repeat Simple_repeat 2 36 0 1970 148 0 0 chr2 151593539 151593866 -99093988 + AluSx SINE Alu 1 327 0 21 0 0 0 chr2 151594453 151594474 -99093380 + AT_rich Low_complexity Low_complexity 1 21 0 276 311 94 84 chr2 151594756 151595289 -99092565 + L2 LINE L2 2715 3255 -17 191 294 0 65 chr2 151596142 151596234 -99091620 + L3 LINE CR1 1019 1104 -473 1954 145 0 0 chr2 151596661 151596978 -99090876 + AluSx SINE Alu 1 317 0 327 206 258 0 chr2 151597063 151597160 -99090694 - MER58 DNA MER1_type -2298 122 1 287 377 46 8 chr2 151597189 151597319 -99090535 + L2 LINE L2 3138 3272 0 180 0 0 0 chr2 151597819 151597839 -99090015 + (T)n Simple_repeat Simple_repeat 1 20 0 1257 173 8 4 chr2 151598188 151598437 -99089417 + L1MC3 LINE L1 7528 7777 -8 812 176 0 0 chr2 151598551 151598670 -99089184 + FLAM_A SINE Alu 2 120 -13 469 283 0 67 chr2 151599101 151599281 -99088573 - MER5B DNA MER1_type 0 178 11 1127 186 42 30 chr2 151599411 151599647 -99088207 + MLT1C LTR MaLR 225 463 -4 1029 229 151 38 chr2 151600016 151600387 -99087467 + L2 LINE L2 2887 3299 -14 307 259 129 47 chr2 151601406 151601599 -99086255 - L3b LINE CR1 -187 1396 1188 201 295 126 21 chr2 151602218 151602313 -99085541 + L2 LINE L2 3168 3272 0 1631 166 7 50 chr2 151602510 151602811 -99085043 + AluJo SINE Alu 7 294 -18 471 243 33 79 chr2 151603488 151603702 -99084152 + L1ME LINE L1 5586 5789 -332 352 302 47 9 chr2 151603735 151603841 -99084013 - L2 LINE L2 -13 3300 3191 340 320 146 15 chr2 151604057 151604263 -99083591 + MIR SINE MIR 19 251 -11 220 330 66 0 chr2 151605246 151605337 -99082517 - L2 LINE L2 -8 3264 3168 2302 101 0 0 chr2 151605608 151605916 -99081938 - AluSx SINE Alu -4 308 1 2299 112 0 7 chr2 151606087 151606391 -99081463 - AluSx SINE Alu -10 302 1 465 255 97 102 chr2 151607165 151607526 -99080328 + L2 LINE L2 2951 3309 -4 25 31 0 0 chr2 151608448 151608480 -99079374 + AT_rich Low_complexity Low_complexity 1 32 0 303 289 145 24 chr2 151609278 151609444 -99078410 + MIR3 SINE MIR 19 204 -4 201 213 12 25 chr2 151609819 151609899 -99077955 + CT-rich Low_complexity Low_complexity 1 79 0 217 367 41 31 chr2 151611481 151611579 -99076275 - L2 LINE L2 -5 3267 3169 192 125 0 0 chr2 151613724 151613756 -99074098 + (CATA)n Simple_repeat Simple_repeat 3 34 0 1103 278 85 57 chr2 151613947 151614668 -99073186 + L1MEd LINE L1 561 1142 -4987 2555 148 28 35 chr2 151614668 151615102 -99072752 + Tigger2a DNA MER2_type 3 433 -1 1103 278 85 57 chr2 151615102 151615244 -99072610 + L1MEd LINE L1 1142 1279 -4850 269 267 10 20 chr2 151615258 151615359 -99072495 - L1M LINE L1 -2380 5428 5329 228 299 94 0 chr2 151615353 151615470 -99072384 + L1MEd LINE L1 1323 1450 -4681 * 2045 60 23 19 chr2 151617490 151617755 -99070099 - AluSc SINE Alu -26 283 18 210 146 0 49 chr2 151617773 151617814 -99070040 + (TTTTC)n Simple_repeat Simple_repeat 5 43 0 1897 65 0 0 chr2 151618689 151618934 -99068920 + L1PA5 LINE L1 5910 6154 0 26 30 0 0 chr2 151618937 151618970 -99068884 + AT_rich Low_complexity Low_complexity 1 33 0 1136 217 26 0 chr2 151619659 151619885 -99067969 - MIR SINE MIR -29 233 2 28 29 0 0 chr2 151620516 151620551 -99067303 + AT_rich Low_complexity Low_complexity 1 35 0 2222 120 0 13 chr2 151621525 151621834 -99066020 - AluSx SINE Alu -7 305 1 665 262 214 20 chr2 151621910 151622261 -99065593 + L2 LINE L2 2895 3313 0 486 261 151 5 chr2 151622419 151622607 -99065247 + MIR SINE MIR 15 211 -51 221 283 66 66 chr2 151622639 151622745 -99065109 - MIR SINE MIR -143 119 14 186 375 89 9 chr2 151623194 151623306 -99064548 + MIR3 SINE MIR 13 133 -75 1500 179 16 47 chr2 151623901 151624265 -99063589 + MLT1A1 LTR MaLR 11 363 -2 465 19 0 0 chr2 151625302 151625356 -99062498 + (TG)n Simple_repeat Simple_repeat 2 55 0 505 271 52 103 chr2 151629290 151629814 -99058040 + LTR33 LTR ERVL 12 508 -13 265 267 44 0 chr2 151630094 151630184 -99057670 + L1ME LINE L1 5730 5823 -298 2091 144 0 7 chr2 151630193 151630499 -99057355 + AluSx SINE Alu 2 305 -7 354 266 0 21 chr2 151630589 151630601 -99057253 - L1MC4 LINE L1 -1337 6705 6694 2392 67 7 3 chr2 151630601 151630900 -99056954 + AluY SINE Alu 1 300 -11 354 266 0 21 chr2 151630900 151630981 -99056873 - L1MC4 LINE L1 -1348 6694 6614 345 300 0 0 chr2 151630907 151630997 -99056857 + L1MC4 LINE L1 6614 6703 -1339 * 418 292 187 24 chr2 151632433 151632652 -99055202 + MIR SINE MIR 7 259 -3 1470 203 128 52 chr2 151633020 151633522 -99054332 + MLT1F LTR MaLR 3 542 0 1760 148 0 15 chr2 151633742 151634012 -99053842 + AluSx SINE Alu 30 295 -17 848 285 43 4 chr2 151634253 151634506 -99053348 - L2 LINE L2 -1159 2155 1893 265 239 0 0 chr2 151634538 151634584 -99053270 - L2 LINE L2 -10 3262 3217 2035 144 34 0 chr2 151634913 151635267 -99052587 - Tigger7 DNA MER2_type 0 2487 2122 1165 204 125 8 chr2 151635263 151635527 -99052327 - Tigger7 DNA MER2_type -2188 299 5 * 304 305 8 46 chr2 151635884 151636015 -99051839 - MIR SINE MIR -46 216 91 2167 102 3 0 chr2 151636045 151636330 -99051524 + AluSx SINE Alu 1 286 -26 373 250 27 0 chr2 151637983 151638095 -99049759 + MER94 DNA DNA 1 115 -19 266 313 9 17 chr2 151638594 151638709 -99049145 - MIR SINE MIR -46 216 103 3721 257 82 28 chr2 151639117 151640588 -99047266 + L2 LINE L2 1746 3312 -1 8039 244 70 26 chr2 151640652 151641273 -99046581 + L1ME1 LINE L1 540 1132 -5103 2073 121 4 0 chr2 151641273 151641588 -99046266 + AluSx SINE Alu 1 316 0 8039 244 70 26 chr2 151641588 151642938 -99044916 + L1ME1 LINE L1 1132 2422 -3813 2285 102 60 26 chr2 151642938 151643290 -99044564 - THE1B LTR MaLR 0 364 1 8039 244 70 26 chr2 151643290 151643790 -99044064 + L1ME1 LINE L1 2422 2899 -3336 2433 165 26 82 chr2 151643790 151644373 -99043481 + MER44D DNA MER2_type 1 605 0 8039 244 70 26 chr2 151644373 151646231 -99041623 + L1ME1 LINE L1 2899 4675 -1560 707 146 22 15 chr2 151646231 151646368 -99041486 + L1MA6 LINE L1 6159 6296 -4 8039 244 70 26 chr2 151646368 151647206 -99040648 + L1ME1 LINE L1 4675 5904 -331 2166 134 0 3 chr2 151647206 151647512 -99040342 + AluSx SINE Alu 1 305 -7 8039 244 70 26 chr2 151647512 151647573 -99040281 + L1ME1 LINE L1 5904 5961 -274 764 195 3 18 chr2 151647630 151647817 -99040037 + L1MA10 LINE L1 5986 6332 -2 1860 134 0 7 chr2 151648389 151648665 -99039189 + AluSx SINE Alu 38 311 -1 323 249 92 23 chr2 151649050 151649267 -99038587 + MER113 DNA MER1_type? 71 302 -219 258 197 0 28 chr2 151649256 151649327 -99038527 - MER113 DNA MER1_type? -158 363 295 * 408 253 101 40 chr2 151649550 151649797 -99038057 - MER91A DNA MER1_type 0 196 6 225 0 0 0 chr2 151650842 151650867 -99036987 + (T)n Simple_repeat Simple_repeat 1 25 0 297 328 8 0 chr2 151650983 151651105 -99036749 + MER117 DNA MER1_type 7 129 -68 368 123 68 0 chr2 151651964 151652037 -99035817 + MER53 DNA DNA 1 78 -111 2401 98 0 6 chr2 151652628 151652943 -99034911 - AluSq SINE Alu 0 313 1 467 138 12 0 chr2 151653752 151653832 -99034022 + MER53 DNA DNA 1 81 -108 234 237 0 0 chr2 151655057 151655154 -99032700 + CT-rich Low_complexity Low_complexity 2 98 0 212 178 24 41 chr2 151655201 151655370 -99032484 + (TCTCTG)n Simple_repeat Simple_repeat 6 171 0 * 219 221 25 0 chr2 151655333 151655455 -99032399 + (TCTG)n Simple_repeat Simple_repeat 2 126 0 * 234 172 35 17 chr2 151655425 151655541 -99032313 + CT-rich Low_complexity Low_complexity 1 118 0 2301 105 0 13 chr2 151655963 151656276 -99031578 - AluSq SINE Alu -4 309 1 250 385 46 0 chr2 151657737 151657846 -99030008 + L3 LINE CR1 271 384 -1193 234 308 45 63 chr2 151658080 151658301 -99029553 + L2 LINE L2 178 394 -2920 1182 280 86 11 chr2 151658339 151658804 -99029050 - MLT1J LTR MaLR -11 500 1 234 241 0 17 chr2 151659221 151659279 -99028575 + CT-rich Low_complexity Low_complexity 1 57 0 328 345 100 35 chr2 151659587 151659877 -99027977 + L3 LINE CR1 480 788 -789 229 226 52 0 chr2 151659888 151660003 -99027851 + (TA)n Simple_repeat Simple_repeat 1 121 0 334 362 99 33 chr2 151660040 151660344 -99027510 + L3 LINE CR1 823 1146 -431 268 281 93 0 chr2 151661847 151661986 -99025868 - MER117 DNA MER1_type -1 196 45 374 224 102 0 chr2 151662186 151662284 -99025570 - MIR SINE MIR -36 226 119 382 351 12 18 chr2 151663380 151663548 -99024306 - MER5A DNA MER1_type 0 189 23 858 199 14 0 chr2 151663712 151663858 -99023996 - FRAM SINE Alu -20 156 9 1351 198 25 82 chr2 151664170 151664636 -99023218 + MLT1B LTR MaLR 1 390 0 393 303 50 25 chr2 151666028 151666269 -99021585 + MIR SINE MIR 16 262 0 900 239 136 68 chr2 151666593 151667162 -99020692 + L1MC4 LINE L1 6579 7108 -934 217 0 0 0 chr2 151667162 151667186 -99020668 + (TTTTA)n Simple_repeat Simple_repeat 2 180 0 1548 112 43 121 chr2 151667186 151667491 -99020363 - AluSg SINE Alu -29 281 1 900 239 136 68 chr2 151667491 151668050 -99019804 + L1MC4 LINE L1 7107 7877 -165 237 257 14 29 chr2 151668558 151668628 -99019226 - MIR SINE MIR -6 256 188 483 219 69 75 chr2 151669340 151669500 -99018354 + L1ME3 LINE L1 5789 5947 -219 233 260 150 24 chr2 151669518 151669645 -99018209 + L1ME3 LINE L1 5922 6064 -98 2402 94 0 0 chr2 151670419 151670726 -99017128 - AluSx SINE Alu -5 307 1 1918 184 124 9 chr2 151670828 151671247 -99016607 + MLT1C LTR MaLR 1 467 0 198 333 29 0 chr2 151671290 151671359 -99016495 - MIR SINE MIR -114 148 78 325 274 88 53 chr2 151672030 151672143 -99015711 - L2 LINE L2 -6 3266 3150 1740 152 4 7 chr2 151672279 151672555 -99015299 - AluJo SINE Alu -31 281 7 276 288 79 14 chr2 151674709 151674848 -99013006 - L1ME LINE L1 -337 5784 5637 288 200 0 0 chr2 151676991 151677051 -99010803 + (TG)n Simple_repeat Simple_repeat 1 60 0 1057 237 79 20 chr2 151678216 151678449 -99009405 + L2 LINE L2 2834 3096 -217 2027 137 0 0 chr2 151678449 151678803 -99009051 + AluSx SINE Alu 1 354 0 1057 237 79 20 chr2 151678803 151678910 -99008944 + L2 LINE L2 3096 3195 -118 296 263 30 0 chr2 151678958 151679057 -99008797 + L2 LINE L2 3094 3195 -118 1737 155 0 0 chr2 151679094 151679345 -99008509 + AluSx SINE Alu 41 291 -21 250 330 10 48 chr2 151679570 151679673 -99008181 + MIR SINE MIR 151 249 -13 925 294 75 29 chr2 151680704 151681187 -99006667 - L2 LINE L2 -5 3308 2804 216 97 0 0 chr2 151681315 151681346 -99006508 + (CA)n Simple_repeat Simple_repeat 1 31 0 26 30 0 0 chr2 151682728 151682761 -99005093 + AT_rich Low_complexity Low_complexity 1 33 0 29 0 0 0 chr2 151683557 151683586 -99004268 + AT_rich Low_complexity Low_complexity 1 29 0 285 246 0 0 chr2 151684053 151684114 -99003740 - MER5A DNA MER1_type 0 189 129 2355 144 8 0 chr2 151684118 151684471 -99003383 + L1PA16 LINE L1 5796 6151 -15 231 226 0 16 chr2 151684487 151684549 -99003305 + GA-rich Low_complexity Low_complexity 4 64 0 3507 52 7 2 chr2 151684686 151685107 -99002747 + L1PA4 LINE L1 5730 6152 -3 260 254 159 0 chr2 151685215 151685278 -99002576 + MER58A DNA MER1_type 1 73 -34 1586 205 0 10 chr2 151685278 151685580 -99002274 + AluJb SINE Alu 1 299 -13 352 205 48 48 chr2 151685622 151685705 -99002149 - MER5A DNA MER1_type -103 86 4 233 280 149 9 chr2 151686613 151686720 -99001134 + MIR SINE MIR 28 149 -113 207 204 0 0 chr2 151688251 151688295 -98999559 + GA-rich Low_complexity Low_complexity 1 44 0 204 40 0 0 chr2 151688407 151688432 -98999422 + (A)n Simple_repeat Simple_repeat 1 25 0 2267 61 3 58 chr2 151689004 151689317 -98998537 + AluSp SINE Alu 2 297 -16 804 93 0 0 chr2 151689984 151690091 -98997763 + FRAM SINE Alu 56 162 -14 281 236 33 90 chr2 151690649 151690815 -98997039 + MLT1F LTR MaLR 236 542 0 658 285 92 0 chr2 151690884 151691091 -98996763 - MIR SINE MIR -30 232 7 217 217 22 0 chr2 151691240 151691286 -98996568 + C-rich Low_complexity Low_complexity 2 48 0 2135 132 0 0 chr2 151692370 151692673 -98995181 + AluSq SINE Alu 1 303 -10 429 263 12 100 chr2 151693103 151693263 -98994591 - MIR3 SINE MIR -47 161 16 25 0 0 0 chr2 151694070 151694095 -98993759 + AT_rich Low_complexity Low_complexity 1 25 0 225 256 0 0 chr2 151694613 151694656 -98993198 + (TG)n Simple_repeat Simple_repeat 2 44 0 205 228 63 38 chr2 151694724 151694803 -98993051 + MIR3 SINE MIR 122 202 -6 210 260 188 31 chr2 151694946 151695042 -98992812 + L2 LINE L2 3136 3246 -26 5030 197 31 24 chr2 151695355 151696398 -98991456 + L1MB7 LINE L1 4076 5110 -1074 1525 194 32 14 chr2 151696398 151696682 -98991172 - AluJo SINE Alu -17 295 7 5030 197 31 24 chr2 151696682 151697718 -98990136 + L1MB7 LINE L1 5110 6168 -16 649 251 48 13 chr2 151697784 151698011 -98989843 + L1ME4a LINE L1 5593 5827 -294 752 233 42 5 chr2 151698175 151698364 -98989490 - MER3 DNA MER1_type -5 204 9 490 290 18 27 chr2 151698665 151698889 -98988965 - L1M4 LINE L1 -6304 238 17 2121 107 0 0 chr2 151698947 151699218 -98988636 + AluSc SINE Alu 13 283 -26 519 262 35 110 chr2 151699223 151699373 -98988481 + L1ME4a LINE L1 5483 5643 -478 1774 120 0 0 chr2 151699373 151699615 -98988239 + AluSx SINE Alu 50 291 -21 519 262 35 110 chr2 151699615 151699825 -98988029 + L1ME4a LINE L1 5643 5809 -312 2361 66 3 3 chr2 151699825 151700114 -98987740 + AluY SINE Alu 1 289 -22 519 262 35 110 chr2 151700114 151700179 -98987675 + L1ME4a LINE L1 5809 5877 -244 210 118 0 0 chr2 151700221 151700255 -98987599 + (TA)n Simple_repeat Simple_repeat 2 35 0 194 352 172 0 chr2 151701654 151701799 -98986055 + L3 LINE CR1 1123 1292 -285 238 259 0 0 chr2 151701800 151701858 -98985996 - MER112 DNA MER1_type -7 253 196 303 245 212 33 chr2 151702260 151702411 -98985443 + MER5B DNA MER1_type 1 178 0 468 286 45 27 chr2 151702508 151702732 -98985122 + L1MCa LINE L1 23 229 -6194 5427 248 85 60 chr2 151702748 151703920 -98983934 + L1MCa LINE L1 932 2073 -4868 279 163 0 0 chr2 151703920 151703963 -98983891 + U2 snRNA snRNA 1 43 -145 5427 248 85 60 chr2 151703963 151704222 -98983632 + L1MCa LINE L1 2073 2324 -4617 888 216 83 29 chr2 151704222 151704426 -98983428 + MER58C DNA MER1_type 1 215 0 5427 248 85 60 chr2 151704426 151704674 -98983180 + L1MCa LINE L1 2324 2564 -4377 591 176 0 34 chr2 151704674 151704793 -98983061 + FRAM SINE Alu 1 40 0 5427 248 85 60 chr2 151704793 151707793 -98980061 + L1MCa LINE L1 2564 6089 -852 470 134 0 0 chr2 151708642 151708709 -98979145 + L2 LINE L2 3245 3311 -2 189 300 0 0 chr2 151709092 151709142 -98978712 + MIR SINE MIR 30 79 -129 749 240 128 50 chr2 151709642 151709979 -98977875 + MLT1L LTR MaLR 3 365 -250 447 163 22 22 chr2 151710165 151710257 -98977597 - AluJ/FRAM SINE Alu -5 307 216 281 294 284 0 chr2 151710312 151710421 -98977433 + L2 LINE L2 3133 3272 0 2240 106 0 13 chr2 151710763 151711066 -98976788 + AluSx SINE Alu 1 299 -13 228 35 0 0 chr2 151711066 151711095 -98976759 + (GA)n Simple_repeat Simple_repeat 2 30 0 207 114 0 0 chr2 151711122 151711157 -98976697 + (TC)n Simple_repeat Simple_repeat 2 36 0 266 278 38 53 chr2 151711423 151711556 -98976298 + MLT1K LTR MaLR 390 520 -68 440 159 11 11 chr2 151711883 151711971 -98975883 - MIR SINE MIR -105 157 70 370 295 119 81 chr2 151712196 151712927 -98974927 + L1M2 LINE L1 439 1270 -5579 304 329 92 48 chr2 151712738 151712987 -98974867 - L1M2 LINE L1 -5832 1017 758 * 215 237 66 53 chr2 151713311 151713387 -98974467 + L2 LINE L2 3140 3216 -56 390 21 0 0 chr2 151714039 151714086 -98973768 + (CA)n Simple_repeat Simple_repeat 1 47 0 1319 103 0 0 chr2 151715412 151715586 -98972268 + AluSq SINE Alu 135 308 -5 1743 223 39 37 chr2 151715655 151716063 -98971791 - LTR2 LTR ERV1 0 449 41 383 231 204 0 chr2 151716289 151716397 -98971457 + MIR SINE MIR 25 154 -108 2051 118 0 0 chr2 151717132 151717411 -98970443 + AluSx SINE Alu 1 279 -33 267 31 0 0 chr2 151717559 151717591 -98970263 + (CA)n Simple_repeat Simple_repeat 2 33 0 605 293 14 14 chr2 151917688 151917903 -98769951 - HAL1 LINE L1 -946 1561 1347 192 158 0 0 chr2 151919421 151919459 -98768395 + (TG)n Simple_repeat Simple_repeat 1 38 0 625 286 71 47 chr2 151919543 151920121 -98767733 - L1ME4a LINE L1 -276 5845 5254 2307 96 0 0 chr2 151920125 151920426 -98767428 - AluSq SINE Alu -12 301 1 424 183 199 8 chr2 151920436 151920512 -98767342 - L1MA10 LINE L1 -4 6330 6255 2468 228 41 30 chr2 151920512 151920619 -98767235 - L1ME1 LINE L1 -96 6070 5966 2370 152 23 30 chr2 151920619 151921054 -98766800 - MSTB1 LTR MaLR 0 432 1 2468 228 41 30 chr2 151921054 151921700 -98766154 - L1ME1 LINE L1 -200 5966 5309 * 3914 248 53 14 chr2 151921694 151923159 -98764695 + L1M4 LINE L1 3753 5274 -872 4402 176 35 36 chr2 151923181 151924286 -98763568 + L1MA9 LINE L1 4824 5952 -360 186 103 0 0 chr2 151924286 151924315 -98763539 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4402 176 35 36 chr2 151924315 151924638 -98763216 + L1MA9 LINE L1 5952 6274 -38 1170 174 4 54 chr2 151924750 151924992 -98762862 - AluJo SINE Alu -1 311 82 186 43 0 0 chr2 151925217 151925240 -98762614 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2333 60 0 0 chr2 151925242 151925523 -98762331 - AluY SINE Alu -30 281 1 1766 246 86 5 chr2 151926093 151926864 -98760990 - Charlie2 DNA MER1_type 0 2862 2030 558 283 35 39 chr2 151926866 151927096 -98760758 - Charlie2 DNA MER1_type -2623 239 11 311 262 36 12 chr2 151927113 151927197 -98760657 + MER5A DNA MER1_type 6 91 -98 317 318 0 9 chr2 151929882 151929992 -98757862 + L1M4 LINE L1 3955 4063 -2083 209 358 122 24 chr2 151930081 151930204 -98757650 - L2 LINE L2 -9 3304 3170 396 323 161 62 chr2 151930485 151930807 -98757047 - L2 LINE L2 -1 3271 2918 2183 142 13 8 chr2 151930933 151931306 -98756548 - THE1C LTR MaLR 0 375 1 2827 80 33 51 chr2 151931771 151932174 -98755680 + MLT2A1 LTR ERVL 1 397 -47 225 0 0 0 chr2 151932174 151932199 -98755655 + (CA)n Simple_repeat Simple_repeat 2 26 0 2827 80 33 51 chr2 151932199 151932247 -98755607 + MLT2A1 LTR ERVL 397 444 0 2138 128 0 0 chr2 151932413 151932709 -98755145 + AluY SINE Alu 1 296 -15 596 221 35 0 chr2 151932718 151932831 -98755023 - FLAM_C SINE Alu -24 119 3 2214 148 56 15 chr2 151933131 151933542 -98754312 + MSTA LTR MaLR 1 428 0 350 169 0 0 chr2 151933633 151933692 -98754162 - L1MA4 LINE L1 -420 5877 5819 2107 157 33 14 chr2 151933692 151934105 -98753749 + L1MA4 LINE L1 5864 6291 -9 371 223 0 10 chr2 151935824 151935927 -98751927 + (CATATA)n Simple_repeat Simple_repeat 5 106 0 254 214 114 30 chr2 151936154 151936242 -98751612 - L1M4 LINE L1 -2824 3322 3218 2329 76 0 47 chr2 151936242 151936559 -98751295 - AluY SINE Alu -9 302 1 254 214 114 30 chr2 151936559 151936601 -98751253 - L1M4 LINE L1 -2928 3218 3181 1171 183 149 77 chr2 151936615 151937172 -98750682 + L1ME2 LINE L1 3876 4472 -1674 1416 99 14 0 chr2 151937172 151937383 -98750471 + L1PB1 LINE L1 5938 6151 0 1543 248 65 23 chr2 151937574 151938226 -98749628 + L1ME2 LINE L1 4496 5182 -964 2288 112 0 3 chr2 151938226 151938529 -98749325 + AluSx SINE Alu 1 302 -10 1543 248 65 23 chr2 151938529 151938579 -98749275 + L1ME2 LINE L1 5182 5228 -918 1834 239 124 13 chr2 151938583 151939092 -98748762 + L1ME2 LINE L1 5368 5978 -186 2403 76 0 13 chr2 151939092 151939406 -98748448 + AluY SINE Alu 1 310 -1 1834 239 124 13 chr2 151939406 151939599 -98748255 + L1ME2 LINE L1 5978 6148 -16 595 304 12 0 chr2 151939991 151940152 -98747702 - MIR3 SINE MIR -12 196 34 35 54 0 0 chr2 151942650 151942706 -98745148 + AT_rich Low_complexity Low_complexity 1 56 0 2157 79 4 4 chr2 151942916 151943195 -98744659 + AluY SINE Alu 1 279 -32 291 114 0 0 chr2 151943196 151943240 -98744614 + (TAA)n Simple_repeat Simple_repeat 2 45 0 275 240 91 38 chr2 151945290 151945415 -98742439 - MIR SINE MIR -77 131 31 192 292 0 0 chr2 151945900 151945948 -98741906 - MIR SINE MIR -151 111 64 288 0 0 0 chr2 151945964 151945996 -98741858 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 285 286 95 62 chr2 151945999 151946240 -98741614 + L2 LINE L2 2716 2964 -350 537 278 0 26 chr2 151946318 151946469 -98741385 + L2 LINE L2 3164 3310 -3 509 248 40 0 chr2 151946712 151946837 -98741017 - MER94 DNA DNA -4 130 1 431 251 61 3 chr2 151947156 151947299 -98740555 - MIR SINE MIR -61 147 3 298 288 38 12 chr2 151947344 151947504 -98740350 + MER103 DNA DNA 2 165 -1 180 0 0 0 chr2 151949510 151949530 -98738324 + (TA)n Simple_repeat Simple_repeat 2 21 0 213 39 0 0 chr2 151949829 151949855 -98737999 + (A)n Simple_repeat Simple_repeat 1 26 0 412 268 78 39 chr2 151952170 151952323 -98735531 + MIR3 SINE MIR 45 203 -5 246 283 17 0 chr2 151952772 151952832 -98735022 + L2 LINE L2 3212 3272 0 212 250 0 0 chr2 151953928 151953972 -98733882 + CT-rich Low_complexity Low_complexity 1 44 0 227 316 74 21 chr2 151953973 151954068 -98733786 - L2 LINE L2 -28 3244 3145 247 269 69 77 chr2 151955334 151955464 -98732390 - L2 LINE L2 -11 3261 3133 22 0 0 0 chr2 151958401 151958423 -98729431 + AT_rich Low_complexity Low_complexity 1 22 0 202 132 26 0 chr2 151958775 151958813 -98729041 + T-rich Low_complexity Low_complexity 6 44 0 233 300 205 21 chr2 151961533 151961742 -98726112 - MIR SINE MIR -4 258 10 495 157 0 0 chr2 151963927 151964016 -98723838 + GA-rich Low_complexity Low_complexity 2 90 0 23 0 0 0 chr2 151969841 151969864 -98717990 + AT_rich Low_complexity Low_complexity 1 23 0 386 342 58 7 chr2 151970380 151970535 -98717319 - L2 LINE L2 0 3272 3110 2052 166 58 85 chr2 151970906 151971189 -98716665 + MLT1D LTR MaLR 1 265 -240 1519 157 72 65 chr2 151971189 151971482 -98716372 - AluJo SINE Alu -17 295 1 2052 166 58 85 chr2 151971482 151971717 -98716137 + MLT1D LTR MaLR 265 505 0 365 333 72 14 chr2 151972551 151972689 -98715165 - MIR3 SINE MIR -53 155 10 432 343 62 17 chr2 151972879 151973057 -98714797 - L2 LINE L2 0 3272 3087 2086 130 0 3 chr2 151974186 151974509 -98713345 - AluSc SINE Alu 0 309 1 2919 80 31 47 chr2 151974675 151974723 -98713131 - MLT2A1 LTR ERVL 0 444 397 207 0 0 0 chr2 151974723 151974746 -98713108 + (TG)n Simple_repeat Simple_repeat 2 24 0 2919 80 31 47 chr2 151974746 151975148 -98712706 - MLT2A1 LTR ERVL -47 397 1 2256 136 11 8 chr2 151975612 151975986 -98711868 + THE1C LTR MaLR 1 375 0 385 301 16 97 chr2 151976112 151976298 -98711556 + L2 LINE L2 2918 3088 -184 194 339 0 15 chr2 151976369 151976434 -98711420 + L2 LINE L2 3249 3312 -1 1967 158 7 0 chr2 151977952 151978262 -98709592 + AluSx SINE Alu 1 312 0 1940 140 0 71 chr2 151978272 151978412 -98709442 + AluJb SINE Alu 1 149 -163 1741 181 7 7 chr2 151978412 151978710 -98709144 + AluSx SINE Alu 1 298 -14 1940 140 0 71 chr2 151978710 151978905 -98708949 + AluJb SINE Alu 149 312 0 198 143 0 0 chr2 151980483 151980518 -98707336 + (CACCAT)n Simple_repeat Simple_repeat 4 38 0 204 338 52 13 chr2 151981230 151981307 -98706547 - L2 LINE L2 -84 3188 3109 2047 125 30 0 chr2 151981643 151981939 -98705915 - AluSx SINE Alu -7 305 1 349 169 0 0 chr2 151981967 151982026 -98705828 + L2 LINE L2 3255 3313 0 399 294 76 8 chr2 151982624 151982743 -98705111 + L2 LINE L2 3146 3272 0 1861 263 67 6 chr2 151982951 151983491 -98704363 - MER90 LTR ERV1 -2 573 1 5267 212 32 30 chr2 151983613 151984838 -98703016 + L1M2 LINE L1 4027 5254 -1013 2238 90 6 29 chr2 151984838 151985150 -98702704 - AluY SINE Alu -6 305 1 5267 212 32 30 chr2 151985150 151985422 -98702432 + L1M2 LINE L1 5254 5524 -743 213 154 0 0 chr2 151985429 151985468 -98702386 + GA-rich Low_complexity Low_complexity 2 40 0 3466 148 53 20 chr2 151985469 151986152 -98701702 + L1MB4 LINE L1 5476 6180 0 2290 100 0 0 chr2 151987345 151987646 -98700208 + AluSc SINE Alu 5 305 -4 2755 239 32 42 chr2 151988750 151989552 -98698302 + MER21B LTR ERV1 1 794 -69 683 277 115 8 chr2 151990054 151990289 -98697565 - MIR SINE MIR 0 262 3 249 111 0 0 chr2 151990713 151990749 -98697105 + tRNA-Gln-CAG tRNA tRNA 3 38 -37 1985 131 10 3 chr2 151990877 151991167 -98696687 - AluSg SINE Alu -18 292 1 1406 298 96 0 chr2 151991410 151991860 -98695994 - LTR33 LTR ERVL -10 511 19 513 258 132 12 chr2 151992669 151992836 -98695018 - MIR SINE MIR 0 262 76 279 227 134 21 chr2 151993092 151993189 -98694665 + MLT1K LTR MaLR 455 562 -26 214 179 0 0 chr2 151993500 151993539 -98694315 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 2414 62 0 28 chr2 151993630 151993950 -98693904 - AluY SINE Alu 0 311 1 1549 141 18 110 chr2 151994054 151994437 -98693417 - MER7A DNA MER2_type 0 346 1 296 265 298 5 chr2 151994652 151994835 -98693019 - MIR SINE MIR 0 262 28 310 356 26 0 chr2 151996891 151997006 -98690848 - L2 LINE L2 0 3272 3155 190 271 21 52 chr2 151997189 151997285 -98690569 - L2 LINE L2 -629 2685 2593 22 0 0 0 chr2 151997419 151997441 -98690413 + AT_rich Low_complexity Low_complexity 1 22 0 225 180 80 0 chr2 151997572 151997622 -98690232 + L1MC4 LINE L1 6650 6703 -1339 242 278 119 30 chr2 151997801 151998096 -98689758 - L1M4 LINE L1 -1112 5034 4714 204 40 0 0 chr2 151999260 151999285 -98688569 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 387 0 0 0 chr2 151999284 151999327 -98688527 + (CA)n Simple_repeat Simple_repeat 1 43 0 2173 145 33 19 chr2 152000029 152000388 -98687466 - THE1B LTR MaLR 0 364 1 11260 94 17 1 chr2 152000388 152001943 -98685911 - THE1B-int LTR MaLR 0 1580 1 2198 134 39 20 chr2 152001943 152002300 -98685554 - THE1B LTR MaLR 0 364 1 27 29 0 0 chr2 152002875 152002909 -98684945 + AT_rich Low_complexity Low_complexity 1 34 0 319 292 77 23 chr2 152003308 152003438 -98684416 - MIR3 SINE MIR -43 165 29 244 114 0 0 chr2 152003984 152004019 -98683835 + Charlie8 DNA MER1_type 231 265 -2152 30 0 0 0 chr2 152005642 152005672 -98682182 + AT_rich Low_complexity Low_complexity 1 30 0 253 375 27 0 chr2 152005686 152005798 -98682056 + MIR SINE MIR 48 162 -100 27 0 0 0 chr2 152007864 152007891 -98679963 + AT_rich Low_complexity Low_complexity 1 27 0 240 266 0 0 chr2 152008813 152008877 -98678977 + A-rich Low_complexity Low_complexity 1 64 0 22 35 0 0 chr2 152008971 152009000 -98678854 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr2 152009163 152009207 -98678647 + AT_rich Low_complexity Low_complexity 1 44 0 260 355 0 28 chr2 152009665 152009772 -98678082 - MIR3 SINE MIR -15 193 90 229 323 111 75 chr2 152010072 152010406 -98677448 - L2 LINE L2 -15 3257 2912 222 37 0 0 chr2 152010632 152010659 -98677195 + (A)n Simple_repeat Simple_repeat 1 27 0 212 250 15 29 chr2 152011973 152012041 -98675813 + L2 LINE L2 3246 3312 -1 267 192 42 108 chr2 152013991 152014111 -98673743 - MER53 DNA DNA 0 189 78 741 295 116 36 chr2 152014192 152014605 -98673249 + L2 LINE L2 2866 3311 -2 185 212 212 35 chr2 152014717 152014830 -98673024 - L3 LINE CR1 -289 1288 1156 * 304 264 99 50 chr2 152014796 152014917 -98672937 - L2 LINE L2 0 3272 3146 * 361 276 38 0 chr2 152014913 152015018 -98672836 + MIR SINE MIR 84 192 -70 2184 100 10 7 chr2 152015024 152015325 -98672529 + AluSx SINE Alu 1 302 -10 198 103 0 0 chr2 152016506 152016535 -98671319 + (A)n Simple_repeat Simple_repeat 1 29 0 1475 119 69 162 chr2 152018751 152018762 -98669092 - Charlie3 DNA MER1_type -64 2648 2638 4075 86 9 2 chr2 152018762 152019312 -98668542 + MER41A LTR ERV1 1 554 0 1475 119 69 162 chr2 152019312 152019603 -98668251 - Charlie3 DNA MER1_type -74 2638 1 397 281 66 0 chr2 152020346 152020467 -98667387 - MLT1I LTR MaLR -4 405 277 2070 147 0 0 chr2 152020483 152020795 -98667059 + AluSx SINE Alu 1 312 0 2274 110 13 0 chr2 152020913 152021222 -98666632 - AluSp SINE Alu 0 313 1 2155 134 7 0 chr2 152021226 152021531 -98666323 - AluSc SINE Alu -2 307 1 243 265 41 31 chr2 152022740 152022838 -98665016 + MLT1J LTR MaLR 1 99 -412 599 293 63 44 chr2 152022920 152023190 -98664664 + MLT1J LTR MaLR 230 504 -7 744 185 17 58 chr2 152023925 152024098 -98663756 - MER6B DNA MER2_type -40 170 5 345 318 58 29 chr2 152024100 152024273 -98663581 - MIR SINE MIR -52 210 33 246 344 80 32 chr2 152024399 152024524 -98663330 + MIR3 SINE MIR 7 137 -71 2134 97 38 0 chr2 152024653 152024942 -98662912 - AluSx SINE Alu -9 303 4 231 224 0 0 chr2 152026569 152026618 -98661236 - L2 LINE L2 0 3313 3265 2026 148 7 0 chr2 152026951 152027256 -98660598 + AluSx SINE Alu 1 307 -5 264 391 75 3 chr2 152028020 152028158 -98659696 + MIR SINE MIR 1 146 -62 265 301 82 36 chr2 152028354 152028550 -98659304 + MLT1H LTR MaLR 124 328 -221 254 271 29 0 chr2 152028703 152028773 -98659081 + MIR SINE MIR 163 234 -28 5120 85 6 3 chr2 152029070 152029785 -98658069 - L1PA13 LINE L1 0 6163 5447 2150 111 7 13 chr2 152029980 152030287 -98657567 - AluSg1 SINE Alu -2 307 3 2366 87 0 0 chr2 152031435 152031746 -98656108 - AluY SINE Alu 0 311 1 992 279 171 4 chr2 152032194 152032871 -98654983 - HAL1 LINE L1 -114 2393 1604 189 336 94 0 chr2 152033447 152033575 -98654279 - L2 LINE L2 -966 2348 2209 1920 190 22 3 chr2 152034308 152034666 -98653188 - MLT1A1 LTR MaLR 0 365 1 258 155 17 35 chr2 152034681 152034739 -98653115 - Charlie1a DNA MER1_type -5 1450 1394 9755 229 39 21 chr2 152034751 152042316 -98645538 + L1PB3 LINE L1 3 6869 -1 5797 199 33 19 chr2 152042326 152043023 -98644831 - Charlie1a DNA MER1_type -1351 1410 725 2409 73 0 10 chr2 152043023 152043337 -98644517 + AluY SINE Alu 1 311 0 5797 199 33 19 chr2 152043337 152044029 -98643825 - Charlie1a DNA MER1_type -2036 725 1 486 335 0 74 chr2 152044466 152044681 -98643173 - MIR SINE MIR -17 245 47 199 361 90 0 chr2 152044686 152044819 -98643035 + MIR SINE MIR 87 231 -31 2116 86 14 4 chr2 152045350 152045629 -98642225 - AluSc SINE Alu -9 300 19 317 268 120 42 chr2 152047691 152047833 -98640021 - MER5A DNA MER1_type -32 157 5 601 274 20 0 chr2 152048540 152048686 -98639168 - MIR SINE MIR -67 195 47 2611 184 56 5 chr2 152049800 152050388 -98637466 + L1MB7 LINE L1 5552 6169 -15 1095 165 131 17 chr2 152050462 152050753 -98637101 + MER33 DNA MER1_type 1 324 0 266 140 35 35 chr2 152051253 152051310 -98636544 - MER91C DNA MER1_type -22 118 62 312 345 35 14 chr2 152053019 152053164 -98634690 + L2 LINE L2 2913 3060 -212 2232 243 74 76 chr2 152053236 152054081 -98633773 - LTR28 LTR ERV1 -19 1736 890 279 0 0 0 chr2 152054081 152054112 -98633742 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2232 243 74 76 chr2 152054112 152054367 -98633487 - LTR28 LTR ERV1 -865 890 1 282 296 173 19 chr2 152054500 152054662 -98633192 + MIR SINE MIR 76 262 0 243 320 103 0 chr2 152054719 152054816 -98633038 + L2 LINE L2 2947 3053 -219 1088 263 155 2 chr2 152054949 152055458 -98632396 + Charlie7 DNA MER1_type 58 644 -1968 975 186 180 12 chr2 152055673 152056007 -98631847 + Charlie1 DNA MER1_type 2372 2761 0 185 275 113 62 chr2 152056011 152056091 -98631763 + L2 LINE L2 3169 3252 -20 269 301 118 29 chr2 152056516 152056652 -98631202 + MER5A DNA MER1_type 7 154 -35 339 127 0 0 chr2 152056655 152056710 -98631144 - MER53 DNA DNA 0 189 135 680 209 80 6 chr2 152056910 152057073 -98630781 - MER5B DNA MER1_type 0 178 4 730 48 19 0 chr2 152057217 152057320 -98630534 + (TCTA)n Simple_repeat Simple_repeat 4 108 0 35 63 0 0 chr2 152057783 152057846 -98630008 + AT_rich Low_complexity Low_complexity 1 63 0 1866 124 0 11 chr2 152058141 152058414 -98629440 - AluSp SINE Alu -9 304 35 761 204 20 20 chr2 152058714 152058866 -98628988 + MER5B DNA MER1_type 27 178 0 1209 146 228 32 chr2 152060091 152060407 -98627447 - MLT1C LTR MaLR 0 467 90 2170 113 0 3 chr2 152060417 152060719 -98627135 - AluSg SINE Alu -9 301 1 492 101 29 0 chr2 152060776 152060845 -98627009 - tRNA-Glu-GAG tRNA tRNA -3 72 2 245 253 20 81 chr2 152060850 152060949 -98626905 - MLT1C LTR MaLR -374 93 1 261 301 70 28 chr2 152061914 152062057 -98625797 - MIR3 SINE MIR -5 203 55 1655 104 0 0 chr2 152062201 152062454 -98625400 - AluSg/x SINE Alu 0 323 71 217 342 120 8 chr2 152062706 152062823 -98625031 - MIR SINE MIR -85 177 48 372 285 162 44 chr2 152062957 152063185 -98624669 + MIR SINE MIR 3 257 -5 203 211 0 0 chr2 152063203 152063241 -98624613 - L2 LINE L2 -212 3060 3023 247 250 0 0 chr2 152063622 152063670 -98624184 + polypyrimidine Low_complexity Low_complexity 1 48 0 1641 178 0 60 chr2 152063732 152064064 -98623790 + AluJo SINE Alu 1 312 0 730 298 49 0 chr2 152065154 152065359 -98622495 + MIR SINE MIR 28 242 -20 297 326 132 62 chr2 152065409 152065713 -98622141 + L2 LINE L2 2948 3272 0 218 195 0 0 chr2 152065714 152065755 -98622099 + (CAAT)n Simple_repeat Simple_repeat 2 42 0 32 43 0 0 chr2 152067173 152067219 -98620635 + AT_rich Low_complexity Low_complexity 1 46 0 3246 134 82 15 chr2 152068025 152068620 -98619234 + MER41B LTR ERV1 1 635 0 1523 214 32 47 chr2 152068941 152069409 -98618445 - MLT1C LTR MaLR 0 467 7 297 227 83 23 chr2 152069599 152069731 -98618123 - MLT1L LTR MaLR -2 613 474 320 283 162 17 chr2 152070152 152070325 -98617529 + MIR3 SINE MIR 6 203 -5 202 179 26 17 chr2 152070424 152070541 -98617313 + (TA)n Simple_repeat Simple_repeat 1 118 0 24 0 0 0 chr2 152070542 152070566 -98617288 + AT_rich Low_complexity Low_complexity 1 24 0 21 71 0 0 chr2 152071618 152071660 -98616194 + AT_rich Low_complexity Low_complexity 1 42 0 1805 164 0 0 chr2 152071664 152071944 -98615910 + AluJb SINE Alu 3 282 -30 2108 258 82 10 chr2 152072037 152072873 -98614981 - Charlie2 DNA MER1_type -110 2752 1856 249 224 12 71 chr2 152072881 152072966 -98614888 - Charlie2 DNA MER1_type -2544 318 239 589 301 141 51 chr2 152073083 152073551 -98614303 + L3 LINE CR1 1057 1566 -11 493 277 126 35 chr2 152074680 152074767 -98613087 - HAL1 LINE L1 -168 2339 2261 282 95 0 0 chr2 152074767 152074809 -98613045 + (CA)n Simple_repeat Simple_repeat 2 43 0 493 277 126 35 chr2 152074809 152075125 -98612729 - HAL1 LINE L1 -246 2261 1899 234 244 154 0 chr2 152076526 152076604 -98611250 + L2 LINE L2 3224 3313 0 183 360 54 37 chr2 152076698 152076801 -98611053 + L2 LINE L2 1917 2017 -1297 2542 64 0 0 chr2 152076801 152077112 -98610742 - AluY SINE Alu 0 311 1 183 360 54 37 chr2 152077112 152077305 -98610549 + L2 LINE L2 2017 2218 -1096 295 328 76 30 chr2 152077659 152077857 -98609997 + L2 LINE L2 2202 2408 -906 208 238 32 32 chr2 152077863 152077926 -98609928 - L2 LINE L2 -1 3271 3209 694 330 112 10 chr2 152077984 152078378 -98609476 + LTR16A LTR ERVL 17 450 0 1684 339 24 6 chr2 152078549 152079812 -98608042 + HERV16 LTR ERVL 257 1561 -3435 467 284 109 16 chr2 152080542 152080725 -98607129 + MIR SINE MIR 63 262 0 272 252 87 61 chr2 152080997 152081112 -98606742 - L2 LINE L2 -2 3270 3153 321 292 55 40 chr2 152081122 152081290 -98606564 - MIR SINE MIR -71 137 9 2592 129 44 5 chr2 152081600 152082012 -98605842 - MSTA LTR MaLR 0 428 1 2274 138 20 21 chr2 152083948 152084318 -98603536 - MLT1A1 LTR MaLR 0 555 2 2157 128 3 3 chr2 152084430 152084743 -98603111 + AluSp SINE Alu 1 313 0 13285 138 16 10 chr2 152085604 152087712 -98600142 - Tigger1 DNA MER2_type -269 2149 30 1824 120 40 0 chr2 152087758 152088034 -98599820 - Tigger1 DNA MER2_type -1517 901 615 268 240 20 0 chr2 152088857 152088957 -98598897 + GA-rich Low_complexity Low_complexity 4 105 0 1911 177 126 63 chr2 152089057 152089532 -98598322 + MLT2B2 LTR ERVL 1 505 -10 184 73 0 73 chr2 152090270 152090311 -98597543 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 21 0 0 0 chr2 152091108 152091129 -98596725 + AT_rich Low_complexity Low_complexity 1 21 0 1922 145 7 0 chr2 152091189 152091479 -98596375 + AluSx SINE Alu 1 292 -20 203 365 83 10 chr2 152091930 152092026 -98595828 + MIR SINE MIR 22 124 -138 2314 84 3 3 chr2 152092255 152092564 -98595290 - AluY SINE Alu -2 309 1 188 196 0 18 chr2 152092564 152092620 -98595234 + CT-rich Low_complexity Low_complexity 3 57 0 266 301 36 60 chr2 152092701 152092867 -98594987 + L2 LINE L2 2227 2388 -926 231 350 51 45 chr2 152093076 152093253 -98594601 + MIR SINE MIR 28 205 -57 186 250 0 0 chr2 152093311 152093351 -98594503 + L2 LINE L2 3266 3305 -8 24 0 0 0 chr2 152093882 152093906 -98593948 + AT_rich Low_complexity Low_complexity 1 24 0 705 257 41 45 chr2 152095936 152096030 -98591824 - MIR SINE MIR 0 262 169 2061 100 3 21 chr2 152096030 152096344 -98591510 + AluSx SINE Alu 1 309 0 705 257 41 45 chr2 152096344 152096493 -98591361 - MIR SINE MIR -93 169 19 209 280 0 0 chr2 152096529 152096579 -98591275 - L3 LINE CR1 -10 1567 1518 200 329 12 59 chr2 152096576 152096661 -98591193 - MIR SINE MIR -116 146 66 * 786 192 28 11 chr2 152096691 152096873 -98590981 - MER5A DNA MER1_type -4 185 1 4444 159 19 20 chr2 152098663 152100138 -98587716 + L1PB1 LINE L1 4320 5791 -360 272 120 20 0 chr2 152100138 152100188 -98587666 + (TA)n Simple_repeat Simple_repeat 1 51 0 2563 110 0 8 chr2 152100188 152100562 -98587292 + L1PB1 LINE L1 5773 6143 -8 24 0 0 0 chr2 152100658 152100682 -98587172 + AT_rich Low_complexity Low_complexity 1 24 0 555 203 16 23 chr2 152100933 152101061 -98586793 - MER103 DNA DNA -5 161 35 420 301 132 36 chr2 152101482 152101701 -98586153 + MIR SINE MIR 10 249 -13 306 0 0 0 chr2 152102740 152102774 -98585080 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1099 211 7 76 chr2 152103518 152103793 -98584061 - MER63B DNA MER1_type -180 256 1 636 270 83 18 chr2 152104339 152104661 -98583193 + L1ME LINE L1 5271 5612 -558 231 232 152 10 chr2 152104663 152104762 -98583092 - LTR16A LTR ERVL -5 445 333 560 306 28 25 chr2 152104936 152105220 -98582634 - L1MEc LINE L1 -4600 1796 1512 304 305 8 0 chr2 152105261 152105379 -98582475 + LTR33A LTR ERVL 405 523 0 6558 22 3 0 chr2 152105494 152106260 -98581594 - L1PA3 LINE L1 0 6155 5388 2120 24 0 0 chr2 152106260 152106508 -98581346 + L1P LINE L1 4569 4816 -1330 20667 156 16 10 chr2 152106528 152107849 -98580005 - L1P4 LINE L1 -590 5899 4586 2397 97 0 0 chr2 152107849 152108160 -98579694 + AluY SINE Alu 1 311 0 20667 156 16 10 chr2 152108160 152110803 -98577051 - L1P4 LINE L1 -1903 4586 1919 7707 138 35 29 chr2 152110794 152112088 -98575766 - L1P4 LINE L1 -5151 1310 10 * 7264 214 24 36 chr2 152112085 152114236 -98573618 - L1PA12 LINE L1 -4649 2925 7 * 21 0 0 0 chr2 152114909 152114930 -98572924 + AT_rich Low_complexity Low_complexity 1 21 0 1564 223 71 17 chr2 152115508 152115917 -98571937 - MER63B DNA MER1_type -2 434 4 189 310 95 52 chr2 152116085 152116201 -98571653 - MER5B DNA MER1_type -57 121 1 46 19 0 0 chr2 152117056 152117109 -98570745 + AT_rich Low_complexity Low_complexity 1 53 0 420 301 23 0 chr2 152117110 152117243 -98570611 + MIR SINE MIR 122 257 -5 247 333 12 0 chr2 152117246 152117330 -98570524 - MIR SINE MIR -118 144 60 21 36 0 0 chr2 152117505 152117533 -98570321 + AT_rich Low_complexity Low_complexity 1 28 0 1916 152 3 7 chr2 152117791 152118093 -98569761 + AluSq SINE Alu 1 301 -12 868 217 47 14 chr2 152118393 152118605 -98569249 + MER20 DNA MER1_type 1 219 0 874 250 23 18 chr2 152118773 152118993 -98568861 + MER58A DNA MER1_type 4 224 0 1882 147 3 14 chr2 152119021 152119349 -98568505 - AluSx SINE Alu 0 325 1 1156 299 87 37 chr2 152119639 152121826 -98566028 + L1MEc LINE L1 1798 4126 -2414 604 281 189 8 chr2 152121967 152122590 -98565264 + L1MEc LINE L1 4323 5058 -1482 543 122 0 0 chr2 152122806 152122880 -98564974 - MER66A LTR ERV1 0 478 405 2906 237 87 16 chr2 152122984 152123529 -98564325 - L1M4 LINE L1 -2824 3322 2817 2241 100 0 19 chr2 152123529 152123838 -98564016 - AluY SINE Alu -8 303 1 2906 237 87 16 chr2 152123838 152124402 -98563452 - L1M4 LINE L1 -3329 2817 2134 325 350 63 14 chr2 152125196 152125339 -98562515 - MIR3 SINE MIR -39 169 20 351 310 44 109 chr2 152125379 152125453 -98562401 + L3b LINE CR1 1177 1254 -329 2345 130 13 16 chr2 152125453 152125829 -98562025 - THE1C LTR MaLR 0 375 1 351 310 44 109 chr2 152125829 152126093 -98561761 + L3b LINE CR1 1254 1493 -90 2265 102 0 7 chr2 152126816 152127119 -98560735 - AluSg SINE Alu -9 301 1 198 242 97 16 chr2 152127623 152127685 -98560169 + MIR SINE MIR 48 114 -148 1574 202 31 52 chr2 152128243 152128630 -98559224 - MLT1B LTR MaLR -11 379 1 28 86 0 0 chr2 152130376 152130446 -98557408 + AT_rich Low_complexity Low_complexity 1 70 0 749 192 0 0 chr2 152130457 152130582 -98557272 - FRAM SINE Alu -23 153 29 381 281 138 42 chr2 152131546 152131713 -98556141 - MIR3 SINE MIR -3 205 23 283 318 78 8 chr2 152131849 152131978 -98555876 + MIR SINE MIR 82 219 -43 200 133 33 33 chr2 152132768 152132828 -98555026 + (TATAA)n Simple_repeat Simple_repeat 3 62 0 515 233 94 83 chr2 152132841 152133434 -98554420 + HAL1 LINE L1 859 1458 -1049 233 206 0 16 chr2 152133458 152133491 -98554363 + (CATATA)n Simple_repeat Simple_repeat 2 35 -28 2411 147 28 32 chr2 152133491 152133927 -98553927 - Tigger2a DNA MER2_type 0 434 1 233 206 0 16 chr2 152133927 152133956 -98553898 + (CATATA)n Simple_repeat Simple_repeat 35 63 0 487 0 32 0 chr2 152133957 152134020 -98553834 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 1919 102 0 0 chr2 152134216 152134470 -98553384 - AluSc SINE Alu -55 254 1 380 272 54 88 chr2 152134562 152134801 -98553053 + HAL1 LINE L1 1802 2032 -475 368 279 108 31 chr2 152135152 152135410 -98552444 + HAL1 LINE L1 2169 2446 -61 292 304 88 8 chr2 152135422 152135547 -98552307 + MLT1L LTR MaLR 8 142 -473 514 283 83 0 chr2 152135748 152135928 -98551926 + MLT1L LTR MaLR 417 611 -4 774 272 84 65 chr2 152136263 152136909 -98550945 - L1MC4a LINE L1 -1895 5913 5256 2109 100 30 3 chr2 152137555 152137890 -98549964 - AluY SINE Alu 0 347 5 233 289 26 0 chr2 152138743 152138819 -98549035 - MIR3 SINE MIR -6 202 125 22 0 0 0 chr2 152139569 152139591 -98548263 + AT_rich Low_complexity Low_complexity 1 22 0 474 200 106 102 chr2 152142980 152143215 -98544639 - MER106A DNA MER1_type 0 236 1 2377 130 16 3 chr2 152143774 152144144 -98543710 + THE1C LTR MaLR 1 375 0 6719 103 41 40 chr2 152144144 152145599 -98542255 + THE1C-int LTR MaLR 1 1580 0 1625 129 16 5 chr2 152145599 152145909 -98541945 + THE1C LTR MaLR 1 368 -7 22 0 0 0 chr2 152146014 152146036 -98541818 + AT_rich Low_complexity Low_complexity 1 22 0 230 265 0 103 chr2 152146416 152146484 -98541370 + L2 LINE L2 3136 3196 -76 2633 123 68 90 chr2 152146736 152146894 -98540960 - MER4B LTR ERV1 -36 574 414 2042 140 0 13 chr2 152146894 152147201 -98540653 + AluSx SINE Alu 1 303 -9 2633 123 68 90 chr2 152147201 152147629 -98540225 - MER4B LTR ERV1 -196 414 1 22 56 0 0 chr2 152148679 152148715 -98539139 + AT_rich Low_complexity Low_complexity 1 36 0 807 169 0 0 chr2 152149070 152149206 -98538648 + FLAM_C SINE Alu 7 142 -1 321 26 0 0 chr2 152149446 152149484 -98538370 + (CA)n Simple_repeat Simple_repeat 2 39 0 442 134 45 15 chr2 152149534 152149668 -98538186 + (TA)n Simple_repeat Simple_repeat 1 138 0 22 56 0 0 chr2 152151426 152151462 -98536392 + AT_rich Low_complexity Low_complexity 1 36 0 200 167 21 0 chr2 152151542 152151590 -98536264 + (TATG)n Simple_repeat Simple_repeat 2 50 0 2269 99 6 13 chr2 152151801 152152114 -98535740 - AluY SINE Alu 0 311 1 237 208 21 0 chr2 152152259 152152307 -98535547 - L2 LINE L2 -1 3312 3264 2112 97 4 0 chr2 152155133 152155412 -98532442 - AluSg SINE Alu -30 280 1 23 0 0 0 chr2 152155585 152155608 -98532246 + AT_rich Low_complexity Low_complexity 1 23 0 362 252 57 65 chr2 152155616 152155717 -98532137 - MIR SINE MIR -13 249 147 2259 81 3 0 chr2 152155717 152156039 -98531815 - AluY SINE Alu 0 323 1 362 252 57 65 chr2 152156039 152156059 -98531795 - MIR SINE MIR -115 147 128 371 223 0 10 chr2 152156150 152156253 -98531601 + (TATATG)n Simple_repeat Simple_repeat 5 106 0 2137 157 33 14 chr2 152157972 152158392 -98529462 - L1MA4 LINE L1 -9 6291 5864 328 173 0 0 chr2 152158392 152158444 -98529410 + L1MA4 LINE L1 5826 5877 -420 2212 148 56 15 chr2 152158535 152158946 -98528908 - MSTA LTR MaLR 0 428 1 591 221 35 0 chr2 152159246 152159359 -98528495 + FLAM_C SINE Alu 3 119 -24 2252 102 0 0 chr2 152159368 152159661 -98528193 - AluY SINE Alu -15 296 4 286 284 39 10 chr2 152160660 152160762 -98527092 + MIR3 SINE MIR 104 208 0 2035 71 45 4 chr2 152161233 152161531 -98526323 - AluY SINE Alu 0 309 1 426 194 126 0 chr2 152161724 152161827 -98526027 - FLAM_A SINE Alu -5 137 22 240 297 143 0 chr2 152161963 152162054 -98525800 + HAL1 LINE L1 1 104 -2403 447 264 26 57 chr2 152162054 152162247 -98525607 - MER63A DNA MER1_type 0 210 24 271 294 12 0 chr2 152162302 152162387 -98525467 + HAL1 LINE L1 123 208 -2299 4055 141 90 101 chr2 152162529 152164066 -98523788 - pTR5 LTR ERV1 0 2438 743 554 278 147 30 chr2 152164066 152164365 -98523489 + HAL1 LINE L1 322 655 -1852 2124 121 3 0 chr2 152164369 152164675 -98523179 + AluSc SINE Alu 1 307 -2 1369 245 170 55 chr2 152164699 152165409 -98522445 + HAL1 LINE L1 826 1453 -1054 2248 93 0 3 chr2 152165409 152165738 -98522116 + AluSc SINE Alu 1 328 0 1369 245 170 55 chr2 152165738 152166197 -98521657 + HAL1 LINE L1 1453 2131 -376 2152 93 10 3 chr2 152167513 152167804 -98520050 + AluSx SINE Alu 1 293 -19 1234 200 0 4 chr2 152167830 152168070 -98519784 - AluJo SINE Alu -9 303 65 2418 76 0 0 chr2 152168750 152169052 -98518802 - AluY SINE Alu -9 302 1 26 0 0 0 chr2 152169271 152169297 -98518557 + AT_rich Low_complexity Low_complexity 1 26 0 213 306 112 31 chr2 152170100 152170198 -98517656 + L2 LINE L2 415 520 -2794 25 51 0 0 chr2 152170904 152170943 -98516911 + AT_rich Low_complexity Low_complexity 1 39 0 2295 103 0 0 chr2 152171843 152172144 -98515710 + AluSg SINE Alu 1 301 -9 403 259 122 61 chr2 152172146 152172343 -98515511 + MIR SINE MIR 25 233 -29 2022 147 162 3 chr2 152173386 152173821 -98514033 - MER61D LTR ERV1 0 501 2 198 264 38 19 chr2 152174142 152174195 -98513659 + MER5A DNA MER1_type 33 86 -103 2129 106 0 0 chr2 152174381 152174654 -98513200 - AluSc SINE Alu -10 299 27 445 228 0 40 chr2 152175157 152175258 -98512596 - MIR SINE MIR -158 104 8 505 282 65 6 chr2 152175409 152175579 -98512275 + MIR SINE MIR 83 262 0 295 42 62 0 chr2 152175825 152175873 -98511981 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 2643 55 0 0 chr2 152176091 152176402 -98511452 + AluY SINE Alu 1 311 0 279 335 59 51 chr2 152178709 152178963 -98508891 - MIR SINE MIR -5 257 2 352 234 96 36 chr2 152179185 152179352 -98508502 - MER117 DNA MER1_type -15 182 6 2186 119 0 0 chr2 152179628 152179922 -98507932 + AluSq SINE Alu 1 294 -19 261 57 0 0 chr2 152180096 152180131 -98507723 + (A)n Simple_repeat Simple_repeat 1 35 0 2489 40 7 10 chr2 152180429 152180731 -98507123 + AluY SINE Alu 1 301 -10 2289 112 0 6 chr2 152182487 152182800 -98505054 + AluY SINE Alu 1 311 0 21 0 0 0 chr2 152182882 152182903 -98504951 + AT_rich Low_complexity Low_complexity 1 21 0 812 208 68 8 chr2 152182965 152183201 -98504653 + MER63 DNA MER1_type 806 1055 -6 603 299 103 18 chr2 152183230 152183454 -98504400 + MIR SINE MIR 6 248 -14 283 290 91 65 chr2 152184293 152184479 -98503375 - MIR3 SINE MIR -1 207 17 532 292 91 9 chr2 152184644 152184863 -98502991 + MIR SINE MIR 16 252 -10 2225 89 13 35 chr2 152185022 152185338 -98502516 - AluY SINE Alu -2 309 1 385 358 5 26 chr2 152185794 152185987 -98501867 - MER5A DNA MER1_type 0 189 1 256 376 21 0 chr2 152186501 152186594 -98501260 + MIR SINE MIR 30 124 -84 649 227 14 77 chr2 152186645 152186811 -98501043 - MIR SINE MIR -21 241 91 1711 195 28 54 chr2 152186811 152187236 -98500618 + MLT2D LTR ERVL 1 414 0 649 227 14 77 chr2 152187236 152187289 -98500565 - MIR SINE MIR -171 91 36 239 95 54 27 chr2 152187998 152188072 -98499782 + T-rich Low_complexity Low_complexity 3 78 0 2315 84 3 7 chr2 152188131 152188427 -98499427 + AluSc SINE Alu 1 295 -14 22 35 0 0 chr2 152191256 152191285 -98496569 + AT_rich Low_complexity Low_complexity 1 29 0 345 100 0 0 chr2 152191492 152191542 -98496312 + (TG)n Simple_repeat Simple_repeat 2 51 0 678 238 33 6 chr2 152192064 152192245 -98495609 + MER3 DNA MER1_type 1 186 -23 2186 112 33 0 chr2 152192612 152192915 -98494939 + AluSp SINE Alu 1 313 0 2047 135 41 36 chr2 152193022 152193384 -98494470 - THE1B LTR MaLR 0 364 1 274 373 80 26 chr2 152193566 152193952 -98493902 - L2 LINE L2 -476 2838 2432 335 279 107 0 chr2 152194759 152194881 -98492973 + MIR SINE MIR 67 201 -61 301 299 60 26 chr2 152195740 152195857 -98491997 - L2 LINE L2 -11 3302 3182 2256 87 0 0 chr2 152195891 152196204 -98491650 - AluSc SINE Alu 0 318 6 889 252 8 48 chr2 152196306 152196556 -98491298 - MIR SINE MIR -10 252 13 2330 75 10 0 chr2 152197880 152198173 -98489681 + AluY SINE Alu 7 302 -9 2108 148 48 18 chr2 152198392 152198791 -98489063 - MSTA LTR MaLR -17 411 1 472 119 0 12 chr2 152198791 152198875 -98488979 - MSTA-int LTR MaLR 0 1651 1569 860 143 25 6 chr2 152198875 152199036 -98488818 - MSTA LTR MaLR -264 164 1 6894 163 88 36 chr2 152199036 152200522 -98487332 - MSTA-int LTR MaLR 0 1580 18 1885 137 109 45 chr2 152200538 152200940 -98486914 - MSTA LTR MaLR 0 428 1 2563 53 0 0 chr2 152200955 152201255 -98486599 - AluY SINE Alu -11 300 1 200 276 5 38 chr2 152201632 152201817 -98486037 + (TAAA)n Simple_repeat Simple_repeat 1 179 0 1114 257 170 9 chr2 152202027 152202451 -98485403 + MLT1D LTR MaLR 12 503 -2 333 333 0 9 chr2 152202586 152202700 -98485154 - L2 LINE L2 -324 2948 2836 5834 92 11 0 chr2 152203827 152204686 -98483168 + L1PA14 LINE L1 5292 6159 -2 2300 80 3 38 chr2 152204754 152205067 -98482787 - AluY SINE Alu -9 302 1 452 311 141 29 chr2 152205628 152206004 -98481850 - L2 LINE L2 -220 3052 2622 1952 124 73 20 chr2 152206032 152206388 -98481466 + THE1C LTR MaLR 1 375 0 886 207 128 20 chr2 152207480 152207784 -98480070 + MER46C DNA MER2_type 1 337 -1 268 169 17 51 chr2 152208077 152208136 -98479718 - L2 LINE L2 0 3313 3257 * 310 263 40 30 chr2 152208135 152208234 -98479620 + MIR SINE MIR 16 115 -93 23 33 0 0 chr2 152208244 152208274 -98479580 + AT_rich Low_complexity Low_complexity 1 30 0 728 268 30 30 chr2 152209414 152209683 -98478171 + MLT1H LTR MaLR 52 320 -229 244 355 97 0 chr2 152209845 152209969 -98477885 + MIR3 SINE MIR 43 178 -30 1945 126 0 58 chr2 152210061 152210386 -98477468 + AluSg SINE Alu 1 306 -4 496 237 82 22 chr2 152212196 152212354 -98475500 - MIR3 SINE MIR -13 195 20 226 279 49 0 chr2 152212336 152212397 -98475457 + MIR3 SINE MIR 111 174 -34 * 932 279 81 39 chr2 152212871 152213009 -98474845 + MLT1J LTR MaLR 25 156 -355 1119 167 0 60 chr2 152213009 152213242 -98474612 - MER20 DNA MER1_type 0 219 1 932 279 81 39 chr2 152213242 152213537 -98474317 + MLT1J LTR MaLR 156 476 -35 777 211 17 28 chr2 152213732 152213912 -98473942 + MER5B DNA MER1_type 1 178 0 306 0 0 0 chr2 152214201 152214235 -98473619 + (CA)n Simple_repeat Simple_repeat 2 35 0 284 87 22 0 chr2 152214414 152214460 -98473394 + MADE1 DNA Mariner 1 47 -33 364 333 72 13 chr2 152215074 152215227 -98472627 + L3b LINE CR1 1268 1429 -154 292 240 115 48 chr2 152215525 152215629 -98472225 - MIR SINE MIR -111 151 41 1564 170 131 21 chr2 152216230 152216550 -98471304 + MSTB1 LTR MaLR 1 373 -59 198 0 0 0 chr2 152216550 152216572 -98471282 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1564 170 131 21 chr2 152216572 152216640 -98471214 + MSTB1 LTR MaLR 373 432 0 214 167 0 0 chr2 152217968 152218004 -98469850 + CT-rich Low_complexity Low_complexity 4 39 0 565 78 0 0 chr2 152218399 152218476 -98469378 + Alu SINE Alu 1 77 -233 1596 85 5 5 chr2 152218576 152218787 -98469067 - AluY SINE Alu -100 211 1 1072 285 79 29 chr2 152219056 152219547 -98468307 + LTR33 LTR ERVL 4 519 -2 2312 74 30 10 chr2 152219874 152220172 -98467682 + AluSc SINE Alu 1 304 -5 420 263 16 28 chr2 152220852 152221002 -98466852 - MIR SINE MIR -62 146 39 2182 227 34 33 chr2 152221452 152222034 -98465820 + MER119 DNA MER1_type 1 583 0 648 286 117 0 chr2 152222037 152222243 -98465611 + MIR SINE MIR 12 241 -21 361 264 93 51 chr2 152222939 152223000 -98464854 + L1ME4a LINE L1 5769 5826 -295 2328 80 3 7 chr2 152223000 152223302 -98464552 - AluY SINE Alu -6 305 5 361 264 93 51 chr2 152223302 152223456 -98464398 + L1ME4a LINE L1 5826 5993 -128 489 315 127 45 chr2 152224695 152225652 -98462202 + L1MC4a LINE L1 4336 5379 -767 361 317 32 0 chr2 152225821 152225944 -98461910 + L1MC4a LINE L1 5816 5942 -1866 205 274 0 16 chr2 152225944 152225952 -98461902 + (CATATA)n Simple_repeat Simple_repeat 1 8 -53 1707 135 30 85 chr2 152225952 152226036 -98461818 + MER7A DNA MER2_type 5 92 -2946 1735 124 0 22 chr2 152226036 152226329 -98461525 + AluSx SINE Alu 23 309 0 1707 135 30 85 chr2 152226329 152226607 -98461247 + MER7A DNA MER2_type 92 346 0 205 274 0 16 chr2 152226607 152226660 -98461194 + (CATATA)n Simple_repeat Simple_repeat 8 61 0 515 309 60 32 chr2 152227302 152227551 -98460303 - MIR SINE MIR -4 258 3 184 288 15 61 chr2 152227964 152228030 -98459824 - MIR SINE MIR -168 94 32 2172 123 3 3 chr2 152229991 152230301 -98457553 + AluSx SINE Alu 1 310 -2 259 299 0 5 chr2 152230993 152231099 -98456755 + MIR SINE MIR 40 144 -64 250 339 231 5 chr2 152232964 152233150 -98454704 - MIR SINE MIR -33 229 2 292 305 78 21 chr2 152235544 152235685 -98452169 + LTR33 LTR ERVL 44 192 -329 682 245 70 12 chr2 152235718 152235959 -98451895 + MER46C DNA MER2_type 80 334 -4 266 259 0 0 chr2 152237213 152237267 -98450587 + L2 LINE L2 3213 3266 -6 394 339 64 35 chr2 152238134 152238305 -98449549 + MER5B DNA MER1_type 1 176 -2 183 42 0 0 chr2 152239595 152239619 -98448235 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 228 264 75 57 chr2 152240027 152240133 -98447721 + L2 LINE L2 3163 3270 -2 21 0 0 0 chr2 152240207 152240228 -98447626 + AT_rich Low_complexity Low_complexity 1 21 0 221 365 22 29 chr2 152240991 152241128 -98446726 - MIR SINE MIR -79 183 48 236 300 100 17 chr2 152241168 152241288 -98446566 + MIR SINE MIR 62 191 -71 546 306 62 19 chr2 152241405 152241712 -98446142 + MER46C DNA MER2_type 1 320 -18 463 338 43 5 chr2 152242018 152242225 -98445629 + MIR SINE MIR 48 262 0 302 332 142 29 chr2 152242995 152243160 -98444694 + L1M4 LINE L1 4881 5026 -1120 2233 168 44 5 chr2 152243160 152243570 -98444284 + MSTB LTR MaLR 1 426 0 302 332 142 29 chr2 152243570 152243678 -98444176 + L1M4 LINE L1 5026 5185 -961 229 185 31 0 chr2 152243749 152243814 -98444040 + (TATG)n Simple_repeat Simple_repeat 2 68 0 2184 115 10 0 chr2 152243972 152244268 -98443586 + AluSx SINE Alu 1 299 -13 321 47 0 0 chr2 152244988 152245031 -98442823 + (CA)n Simple_repeat Simple_repeat 2 44 0 891 194 4 97 chr2 152245526 152245773 -98442081 + MER58A DNA MER1_type 1 224 0 184 309 82 31 chr2 152246588 152246685 -98441169 + MIR3 SINE MIR 82 183 -25 1323 245 50 16 chr2 152246819 152247146 -98440708 + MSTD LTR MaLR 1 344 -52 211 26 0 53 chr2 152247146 152247184 -98440670 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1323 245 50 16 chr2 152247184 152247239 -98440615 + MSTD LTR MaLR 344 396 0 414 219 204 22 chr2 152249083 152249220 -98438634 - MER45 DNA AcHobo -1 1580 1419 909 257 48 16 chr2 152249294 152249612 -98438242 - MER45C DNA AcHobo -577 376 1 451 307 45 6 chr2 152249671 152249847 -98438007 + MLT1L LTR MaLR 431 613 -2 1321 236 129 5 chr2 152250841 152251252 -98436602 + MLT1C LTR MaLR 6 467 0 35 24 0 0 chr2 152252148 152252190 -98435664 + AT_rich Low_complexity Low_complexity 1 42 0 2410 77 0 3 chr2 152253491 152253802 -98434052 + AluY SINE Alu 1 310 -1 186 270 48 32 chr2 152254051 152254114 -98433740 - L3b LINE CR1 0 1583 1520 22 35 0 0 chr2 152255083 152255112 -98432742 + AT_rich Low_complexity Low_complexity 1 29 0 216 381 21 10 chr2 152255270 152255367 -98432487 - L2 LINE L2 -1 3312 3215 572 294 91 0 chr2 152255605 152255802 -98432052 + MIR SINE MIR 22 236 -26 21 0 0 0 chr2 152255986 152256007 -98431847 + AT_rich Low_complexity Low_complexity 1 21 0 261 328 0 0 chr2 152256086 152256144 -98431710 + L3b LINE CR1 1519 1576 -7 2493 64 0 0 chr2 152257296 152257593 -98430261 - AluY SINE Alu -10 301 5 298 320 123 0 chr2 152257639 152257761 -98430093 + L2 LINE L2 2560 2696 -618 352 309 48 8 chr2 152257933 152258059 -98429795 + L2 LINE L2 3174 3304 -9 21 0 0 0 chr2 152258148 152258169 -98429685 + AT_rich Low_complexity Low_complexity 1 21 0 2092 101 11 0 chr2 152258173 152258450 -98429404 - AluSc SINE Alu -29 280 1 25 0 0 0 chr2 152258490 152258515 -98429339 + AT_rich Low_complexity Low_complexity 1 25 0 525 330 101 28 chr2 152260706 152261181 -98426673 - L2 LINE L2 -211 3061 2539 401 286 91 25 chr2 152261401 152261766 -98426088 - L1MC4a LINE L1 -153 5968 5606 480 311 48 29 chr2 152261790 152262190 -98425664 - L1MC4a LINE L1 -615 5555 5134 227 225 46 93 chr2 152263250 152263401 -98424453 + MER103 DNA DNA 11 154 -12 234 214 43 14 chr2 152267886 152267956 -98419898 + CT-rich Low_complexity Low_complexity 1 72 0 371 306 136 5 chr2 152268422 152268621 -98419233 - MIR SINE MIR -24 238 14 822 216 54 77 chr2 152268987 152269185 -98418669 + MLT1A2 LTR MaLR 1 202 -265 360 0 0 0 chr2 152269185 152269225 -98418629 + (CA)n Simple_repeat Simple_repeat 1 40 0 822 216 54 77 chr2 152269225 152269507 -98418347 + MLT1A2 LTR MaLR 202 467 0 405 318 60 7 chr2 152269536 152269687 -98418167 - MIR SINE MIR -94 168 10 2148 108 4 0 chr2 152269808 152270116 -98417738 + AluSg SINE Alu 1 309 0 282 257 237 4 chr2 152270547 152270792 -98417062 - MER20B DNA MER1_type -108 675 374 227 31 31 0 chr2 152270797 152270829 -98417025 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2208 121 0 0 chr2 152270927 152271234 -98416620 - AluY SINE Alu -2 309 3 1471 187 109 0 chr2 152271239 152271506 -98416348 - AluSx SINE Alu -16 296 1 719 294 45 8 chr2 152271912 152272177 -98415677 - MER20B DNA MER1_type -423 360 86 366 100 50 90 chr2 152272570 152272670 -98415184 - MER53 DNA DNA -10 179 84 363 161 62 0 chr2 152272691 152272772 -98415082 + MER53 DNA DNA 101 186 -3 2575 58 0 0 chr2 152272882 152273193 -98414661 - AluY SINE Alu 0 311 1 483 211 39 16 chr2 152273554 152273682 -98414172 + L1ME1 LINE L1 6033 6163 -3 25 0 0 0 chr2 152273682 152273707 -98414147 + AT_rich Low_complexity Low_complexity 1 25 0 1942 158 39 30 chr2 152274153 152274515 -98413339 + MLT1A1 LTR MaLR 1 365 0 255 186 43 14 chr2 152275105 152275175 -98412679 + (TA)n Simple_repeat Simple_repeat 1 72 0 22 0 0 0 chr2 152275308 152275330 -98412524 + AT_rich Low_complexity Low_complexity 1 22 0 222 296 68 23 chr2 152276871 152276959 -98410895 + L2 LINE L2 2953 3044 -269 2215 200 14 0 chr2 152277049 152277469 -98410385 + MSTB LTR MaLR 1 426 0 230 86 29 0 chr2 152277730 152277765 -98410089 - MSTB1 LTR MaLR 0 432 397 2049 143 0 0 chr2 152277899 152278199 -98409655 + AluSx SINE Alu 13 312 0 3357 227 131 17 chr2 152278202 152279017 -98408837 - MST-int LTR MaLR -65 1586 679 615 245 0 31 chr2 152279095 152279254 -98408600 - MIR SINE MIR 0 262 109 2509 160 16 2 chr2 152279297 152279721 -98408133 + MSTB1 LTR MaLR 3 432 0 3404 197 25 13 chr2 152279721 152280395 -98407459 + MSTB1-int LTR MaLR 1 682 -969 7268 95 10 23 chr2 152280461 152281532 -98406322 - MER11C LTR ERVK -14 1057 1 26 50 0 0 chr2 152284220 152284260 -98403594 + AT_rich Low_complexity Low_complexity 1 40 0 2259 127 0 6 chr2 152284386 152284700 -98403154 + AluSx SINE Alu 1 312 0 206 250 131 24 chr2 152285032 152285116 -98402738 + MER91C DNA MER1_type 13 105 -35 466 275 47 35 chr2 152285139 152285397 -98402457 + L1MC4a LINE L1 5664 5924 -1884 28 61 0 0 chr2 152285600 152285649 -98402205 + AT_rich Low_complexity Low_complexity 1 49 0 1091 177 0 15 chr2 152285714 152285917 -98401937 + L1PB1 LINE L1 1367 1566 -5297 * 12179 176 73 22 chr2 152285901 152288245 -98399609 + L1PB1 LINE L1 2463 5171 -1696 387 0 0 0 chr2 152288245 152288288 -98399566 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 12179 176 73 22 chr2 152288288 152290069 -98397785 + L1PB1 LINE L1 5171 6859 -8 1777 191 74 0 chr2 152290073 152290477 -98397377 - L1M2 LINE L1 -4005 2844 2411 1581 260 67 26 chr2 152290889 152291746 -98396108 + L1ME3 LINE L1 5255 6162 0 430 284 88 14 chr2 152292104 152292252 -98395602 - MIR SINE MIR -12 250 92 1007 232 5 10 chr2 152292256 152292463 -98395391 + AluJo SINE Alu 1 206 -106 180 0 0 0 chr2 152292501 152292521 -98395333 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 2083 156 11 8 chr2 152293134 152293494 -98394360 + MER46B DNA MER2_type 1 236 0 354 295 104 17 chr2 152293623 152293796 -98394058 - MLT1L LTR MaLR -276 339 152 2040 159 28 28 chr2 152294468 152294858 -98392996 + MLT1B LTR MaLR 1 390 0 243 317 85 24 chr2 152295205 152295369 -98392485 - L2 LINE L2 0 3313 3140 225 0 0 0 chr2 152295396 152295421 -98392433 + (T)n Simple_repeat Simple_repeat 1 25 0 347 375 7 7 chr2 152295967 152296119 -98391735 - MER5B DNA MER1_type -15 163 12 1894 131 11 7 chr2 152296634 152296909 -98390945 + AluJb SINE Alu 21 296 -16 246 173 58 0 chr2 152297041 152297093 -98390761 + MLT1D LTR MaLR 31 85 -420 1018 229 140 50 chr2 152297144 152297502 -98390352 + MLT1D LTR MaLR 95 484 -21 5183 221 27 71 chr2 152297502 152298781 -98389073 + MLT1D-int LTR MaLR 2 1212 -159 1888 195 25 8 chr2 152298781 152299140 -98388714 - MLT1A1 LTR MaLR 0 365 1 5183 221 27 71 chr2 152299140 152299288 -98388566 + MLT1D-int LTR MaLR 1212 1365 -6 922 211 102 86 chr2 152299312 152299711 -98388143 + MLT1D LTR MaLR 76 467 0 21 36 0 0 chr2 152299720 152299748 -98388106 + AT_rich Low_complexity Low_complexity 1 28 0 3537 137 45 3 chr2 152299826 152300404 -98387450 - LTR26 LTR ERV1 -1 602 1 294 303 87 13 chr2 152300610 152300762 -98387092 + MIR3 SINE MIR 19 184 -50 22 56 0 0 chr2 152300938 152300974 -98386880 + AT_rich Low_complexity Low_complexity 1 36 0 691 189 69 19 chr2 152301880 152302039 -98385815 - MLT1B LTR MaLR -216 174 8 2010 143 3 0 chr2 152302273 152302559 -98385295 - AluSx SINE Alu -25 287 1 1473 123 45 0 chr2 152302637 152302857 -98384997 - MER30 DNA MER1_type 0 230 1 288 289 24 0 chr2 152302869 152302952 -98384902 + L2 LINE L2 3227 3311 -2 214 128 0 51 chr2 152304646 152304685 -98383169 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 236 274 0 0 chr2 152305319 152305381 -98382473 + L1ME LINE L1 5398 5459 -2349 506 294 129 10 chr2 152305402 152305711 -98382143 + L1ME LINE L1 5394 5739 -382 180 0 0 0 chr2 152306206 152306226 -98381628 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 560 329 111 10 chr2 152306613 152306920 -98380934 - MER102b DNA MER1_type -3 338 1 304 282 47 0 chr2 152307366 152307451 -98380403 + L1ME LINE L1 5730 5818 -303 526 192 16 6 chr2 152307497 152307634 -98380220 + MER93a LTR ERV1 1 138 -235 547 291 57 17 chr2 152307638 152307813 -98380041 - MIR SINE MIR -57 205 24 444 191 191 88 chr2 152309956 152310150 -98377704 - MER58C DNA MER1_type -1 214 1 250 189 66 9 chr2 152310270 152310376 -98377478 + (TCTA)n Simple_repeat Simple_repeat 3 114 0 1182 192 49 116 chr2 152311084 152311490 -98376364 + MLT1B LTR MaLR 1 379 -11 541 114 27 60 chr2 152311855 152312039 -98375815 + CT-rich Low_complexity Low_complexity 3 180 0 285 296 72 8 chr2 152312169 152312294 -98375560 + LTR16C LTR ERVL 126 258 -233 342 291 89 59 chr2 152312329 152312679 -98375175 - LTR16A1 LTR ERVL -12 475 106 261 0 0 0 chr2 152312829 152312858 -98374996 + (CA)n Simple_repeat Simple_repeat 2 30 0 607 321 50 4 chr2 152313282 152313522 -98374332 + MIR SINE MIR 12 262 0 271 284 268 5 chr2 152313519 152313709 -98374145 + MIR SINE MIR 17 256 -6 * 257 270 135 0 chr2 152313891 152313980 -98373874 - L3 LINE CR1 -180 1397 1297 1605 143 3 144 chr2 152314540 152314615 -98373239 + L1MB1 LINE L1 5719 5803 -365 1933 146 7 3 chr2 152314615 152314903 -98372951 + AluSx SINE Alu 1 289 -23 1605 143 3 144 chr2 152314903 152315334 -98372520 + L1MB1 LINE L1 5803 6063 -105 671 186 0 11 chr2 152315416 152315593 -98372261 + GA-rich Low_complexity Low_complexity 4 178 0 254 95 24 0 chr2 152315934 152315976 -98371878 + (CA)n Simple_repeat Simple_repeat 2 44 0 237 344 100 44 chr2 152316206 152316366 -98371488 - MIR3 SINE MIR -10 198 30 847 190 22 11 chr2 152316523 152316707 -98371147 - MER4C LTR ERV1 0 465 280 502 118 39 118 chr2 152316742 152316869 -98370985 - MER4C LTR ERV1 -347 118 2 32 0 0 0 chr2 152317443 152317475 -98370379 + AT_rich Low_complexity Low_complexity 1 32 0 736 267 52 69 chr2 152317828 152318059 -98369795 - MLT1L LTR MaLR -8 607 276 2139 73 0 11 chr2 152321871 152322143 -98365711 + AluY SINE Alu 36 304 -7 1572 167 44 7 chr2 152322983 152323258 -98364596 - AluJb SINE Alu -27 285 1 2150 109 7 3 chr2 152323765 152324058 -98363796 - AluSc SINE Alu -15 294 1 492 364 33 11 chr2 152325284 152325559 -98362295 + L3 LINE CR1 707 987 -590 496 335 26 0 chr2 152325577 152325757 -98362097 - MIR SINE MIR -11 251 67 394 205 37 87 chr2 152325773 152325934 -98361920 - MIR SINE MIR 0 262 110 622 212 89 14 chr2 152325953 152326099 -98361755 + MLT2F LTR ERVL 507 663 0 210 330 21 0 chr2 152327014 152327111 -98360743 + CT-rich Low_complexity Low_complexity 3 101 0 1368 207 48 27 chr2 152327527 152327861 -98359993 + MER58B DNA MER1_type 1 341 0 2594 181 43 21 chr2 152330086 152330618 -98357236 - MER74A LTR ERVL -14 544 1 355 381 17 0 chr2 152332906 152333024 -98354830 - L2 LINE L2 -19 3253 3134 212 146 0 42 chr2 152333545 152333593 -98354261 + (TATATG)n Simple_repeat Simple_repeat 6 51 0 512 260 232 17 chr2 152333599 152333776 -98354078 + MIR SINE MIR 4 218 -44 201 293 47 66 chr2 152334007 152334113 -98353741 + MIR3 SINE MIR 89 192 -16 2311 93 3 0 chr2 152335451 152335742 -98352112 - AluSq SINE Alu -21 292 1 188 270 40 90 chr2 152337334 152337434 -98350420 + MIR SINE MIR 42 136 -126 2051 136 0 7 chr2 152338293 152338594 -98349260 + AluSx SINE Alu 1 299 -13 1782 136 25 25 chr2 152339581 152339867 -98347987 + AluSx SINE Alu 2 287 -25 360 310 23 41 chr2 152339875 152340046 -98347808 - MER5A DNA MER1_type -15 174 7 206 250 121 69 chr2 152340044 152340160 -98347694 + L2 LINE L2 2208 2329 -985 * 297 345 23 11 chr2 152340843 152340930 -98346924 - L2 LINE L2 0 3272 3185 275 255 101 47 chr2 152341137 152341286 -98346568 - MLT1J LTR MaLR -23 488 332 318 305 23 38 chr2 152341351 152341482 -98346372 - MLT1J2 LTR MaLR -305 145 17 2196 101 0 7 chr2 152342064 152342393 -98345461 - AluSq SINE Alu 0 313 1 1516 192 3 31 chr2 152342685 152342971 -98344883 + AluJo SINE Alu 1 278 -34 375 78 0 0 chr2 152342976 152343027 -98344827 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 403 347 65 17 chr2 152343385 152343737 -98344117 - L1MC4a LINE L1 -1945 5863 5495 241 363 80 9 chr2 152343819 152343932 -98343922 - MIR3 SINE MIR -75 133 13 1957 173 44 22 chr2 152343996 152344361 -98343493 - MSTB LTR MaLR -53 373 1 1982 132 0 29 chr2 152344762 152344931 -98342923 - AluSx SINE Alu -11 301 144 2355 100 3 0 chr2 152344931 152345241 -98342613 - AluSp SINE Alu -2 311 1 1982 132 0 29 chr2 152345241 152345381 -98342473 - AluSx SINE Alu -168 144 1 4295 50 28 0 chr2 152346616 152347161 -98340693 - L1PA7 LINE L1 0 6154 5595 225 0 0 0 chr2 152347193 152347218 -98340636 + (CA)n Simple_repeat Simple_repeat 2 26 0 931 153 0 137 chr2 152347445 152347694 -98340160 + MER20 DNA MER1_type 4 218 -1 2176 131 0 3 chr2 152348181 152348478 -98339376 - AluSx SINE Alu -16 296 1 724 228 101 0 chr2 152348918 152349076 -98338778 - MER45A DNA AcHobo -3 175 2 360 270 26 118 chr2 152349148 152349237 -98338617 - MER91C DNA MER1_type -1 139 68 2230 107 3 3 chr2 152349237 152349547 -98338307 - AluSx SINE Alu -1 311 2 360 270 26 118 chr2 152349547 152349609 -98338245 - MER91C DNA MER1_type -72 68 2 270 327 87 27 chr2 152350026 152350176 -98337678 - MIR3 SINE MIR -6 202 44 250 289 0 12 chr2 152351579 152351662 -98336192 + MLT1F LTR MaLR 453 534 -8 29 0 0 0 chr2 152352479 152352508 -98335346 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr2 152352896 152352933 -98334921 + AT_rich Low_complexity Low_complexity 1 37 0 1200 210 130 38 chr2 152353070 152353469 -98334385 - L1MD3 LINE L1 -7 8035 7611 295 244 22 0 chr2 152354024 152354114 -98333740 + L1ME1 LINE L1 17 108 -6315 3326 222 33 70 chr2 152354938 152355452 -98332402 + L1ME1 LINE L1 4924 5456 -1505 1760 162 65 0 chr2 152355452 152355742 -98332112 + AluJb SINE Alu 1 309 -3 3326 222 33 70 chr2 152355742 152356755 -98331099 + L1ME1 LINE L1 5456 6396 -565 936 237 110 22 chr2 152356782 152357145 -98330709 - LTR52 LTR ERVL -14 407 13 1943 140 0 14 chr2 152357145 152357437 -98330417 + AluSx SINE Alu 3 290 -22 1609 237 127 10 chr2 152357452 152357950 -98329904 + L1ME1 LINE L1 6401 6956 -5 195 390 25 38 chr2 152357984 152358143 -98329711 - MIR SINE MIR -103 159 3 316 297 99 0 chr2 152359850 152359961 -98327893 - MIR SINE MIR -53 209 88 306 255 75 11 chr2 152359988 152360082 -98327772 - MLT1J2 LTR MaLR -33 417 318 270 302 123 0 chr2 152360251 152360357 -98327497 - MLT1J2 LTR MaLR -289 161 43 224 224 15 0 chr2 152360538 152360605 -98327249 + GA-rich Low_complexity Low_complexity 3 70 0 7197 205 27 15 chr2 152362191 152365128 -98322726 + L1MC1 LINE L1 3355 6333 0 2405 80 13 0 chr2 152365420 152365720 -98322134 + AluSq SINE Alu 2 305 -8 25 0 0 0 chr2 152365730 152365755 -98322099 + AT_rich Low_complexity Low_complexity 1 25 0 537 16 0 0 chr2 152365797 152365859 -98321995 + (CA)n Simple_repeat Simple_repeat 2 63 0 2440 255 108 36 chr2 152366073 152367547 -98320307 - L1MEc LINE L1 -2433 4508 2928 507 282 120 37 chr2 152367605 152367616 -98320238 - L1MEc LINE L1 -4010 2931 2922 2211 100 3 0 chr2 152367616 152367906 -98319948 + AluSc SINE Alu 4 294 -15 507 282 120 37 chr2 152367906 152368270 -98319584 - L1MEc LINE L1 -4019 2922 2525 2025 140 0 0 chr2 152368272 152368565 -98319289 - AluSx SINE Alu -19 293 1 1015 289 93 43 chr2 152368566 152369490 -98318364 - L1MEc LINE L1 -4469 2653 1684 1437 207 79 58 chr2 152369543 152369958 -98317896 - MLT1D LTR MaLR 0 505 99 254 344 16 0 chr2 152370009 152370147 -98317707 - L1MEc LINE L1 -5005 1614 1273 2262 109 0 0 chr2 152371213 152371515 -98316339 - AluSg SINE Alu -8 302 1 403 258 159 28 chr2 152372197 152372379 -98315475 + L1ME3A LINE L1 5960 6165 -5 28 48 0 0 chr2 152372592 152372634 -98315220 + AT_rich Low_complexity Low_complexity 1 42 0 2011 230 103 22 chr2 152372694 152373323 -98314531 + MLT1E2 LTR MaLR 3 626 0 193 371 147 9 chr2 152374093 152374209 -98313645 + MIR SINE MIR 16 147 -115 22 0 0 0 chr2 152374318 152374340 -98313514 + AT_rich Low_complexity Low_complexity 1 22 0 249 269 0 0 chr2 152375558 152375610 -98312244 + Charlie8 DNA MER1_type 1375 1426 -991 23 0 0 0 chr2 152376272 152376295 -98311559 + AT_rich Low_complexity Low_complexity 1 23 0 189 269 15 45 chr2 152376371 152376438 -98311416 + MIR3 SINE MIR 144 208 0 194 299 52 41 chr2 152376485 152376582 -98311272 - MIR SINE MIR -6 256 159 21 104 0 0 chr2 152377313 152377390 -98310464 + AT_rich Low_complexity Low_complexity 1 77 0 2148 112 53 31 chr2 152378015 152378371 -98309483 + THE1B LTR MaLR 1 364 0 270 338 0 0 chr2 152378690 152378758 -98309096 - L2 LINE L2 0 3272 3205 1856 211 73 25 chr2 152379674 152380114 -98307740 - MLT1D LTR MaLR -11 494 34 1274 304 153 30 chr2 152381664 152381952 -98305902 + L2 LINE L2 2172 2423 -890 1936 115 14 7 chr2 152381952 152382248 -98305606 + AluY SINE Alu 1 298 -13 1274 304 153 30 chr2 152382248 152383004 -98304850 + L2 LINE L2 2423 3311 -2 326 305 37 21 chr2 152384135 152384322 -98303532 - MIR SINE MIR -14 248 59 705 265 57 7 chr2 152385308 152385507 -98302347 - MIR SINE MIR -38 224 16 244 308 56 79 chr2 152385557 152385771 -98302083 + L2 LINE L2 2877 3085 -187 1425 184 0 0 chr2 152386146 152386403 -98301451 + AluJo SINE Alu 49 305 0 22 35 0 0 chr2 152387070 152387099 -98300755 + AT_rich Low_complexity Low_complexity 1 29 0 294 244 12 24 chr2 152387364 152387446 -98300408 + GA-rich Low_complexity Low_complexity 2 82 0 200 226 38 0 chr2 152387798 152387851 -98300003 + CT-rich Low_complexity Low_complexity 2 56 0 3503 123 93 2 chr2 152390858 152391449 -98296405 + L1PA16 LINE L1 5521 6165 -1 191 36 36 0 chr2 152391453 152391481 -98296373 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 5844 149 53 10 chr2 152392474 152393622 -98294232 + L1MC1 LINE L1 5130 6333 0 2068 122 48 0 chr2 152394463 152394758 -98293096 + AluSg SINE Alu 1 309 -1 2165 245 109 35 chr2 152395085 152395987 -98291867 + L1MEc LINE L1 1353 2354 -3861 1686 161 80 0 chr2 152395987 152396261 -98291593 - AluJb SINE Alu -9 303 8 2165 245 109 35 chr2 152396261 152396749 -98291105 + L1MEc LINE L1 2354 2804 -3411 240 35 0 0 chr2 152399248 152399277 -98288577 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2246 97 0 0 chr2 152399601 152399899 -98287955 - AluSg SINE Alu -12 298 1 252 281 0 0 chr2 152399991 152400055 -98287799 + (TA)n Simple_repeat Simple_repeat 2 65 0 1664 119 58 0 chr2 152400410 152400705 -98287149 - L1MA9 LINE L1 0 6312 6001 199 211 19 144 chr2 152400932 152401036 -98286818 - L3 LINE CR1 -85 1492 1402 1511 258 154 20 chr2 152402305 152402963 -98284891 + L2 LINE L2 2285 3042 -271 2289 113 0 0 chr2 152403809 152404110 -98283744 - AluSx SINE Alu -11 301 1 26 30 0 0 chr2 152404169 152404202 -98283652 + AT_rich Low_complexity Low_complexity 1 33 0 2030 165 19 135 chr2 152405192 152405726 -98282128 - MER70A LTR ERVL 0 472 1 411 225 303 17 chr2 152406101 152406279 -98281575 + MIR SINE MIR 34 262 0 24 0 0 0 chr2 152406355 152406379 -98281475 + AT_rich Low_complexity Low_complexity 1 24 0 1061 140 4 68 chr2 152407134 152407369 -98280485 + L1MA7 LINE L1 6072 6291 0 384 22 0 0 chr2 152408675 152408720 -98279134 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 249 108 0 0 chr2 152409431 152409468 -98278386 + (TA)n Simple_repeat Simple_repeat 2 38 0 1039 283 108 23 chr2 152409468 152410507 -98277347 + L1MEc LINE L1 872 2067 -4329 8081 108 2 12 chr2 152410527 152411672 -98276182 + L1PA8A LINE L1 1 1133 -4742 15505 98 2 3 chr2 152411673 152414679 -98273175 + L1PA8A LINE L1 3444 6446 0 1154 176 0 0 chr2 152414985 152415167 -98272687 - FRAM SINE Alu 0 176 1 850 190 32 6 chr2 152415285 152415443 -98272411 + FRAM SINE Alu 2 163 -3 1510 281 89 27 chr2 152416103 152416587 -98271267 + MLT1G1 LTR MaLR 75 588 -7 1762 160 83 24 chr2 152417333 152417707 -98270147 + MSTD LTR MaLR 1 396 0 2129 212 19 74 chr2 152418011 152418592 -98269262 + MLT2B3 LTR ERVL 1 549 -5 260 250 0 74 chr2 152419213 152419295 -98268559 + MER5B DNA MER1_type 2 76 -102 2360 90 3 0 chr2 152419295 152419606 -98268248 - AluSq SINE Alu -1 312 1 260 250 0 74 chr2 152419606 152419631 -98268223 + MER5B DNA MER1_type 76 101 -77 212 280 86 21 chr2 152419793 152419886 -98267968 - MER5B DNA MER1_type -73 105 7 21 0 0 0 chr2 152420027 152420048 -98267806 + AT_rich Low_complexity Low_complexity 1 21 0 2023 88 33 4 chr2 152420094 152420388 -98267466 - AluSg SINE Alu 0 304 3 1329 274 23 39 chr2 152420434 152420875 -98266979 + LTR16B LTR ERVL 1 434 -30 2942 220 30 80 chr2 152421627 152421780 -98266074 + Charlie1 DNA MER1_type 7 166 -2595 2121 215 74 28 chr2 152421780 152422385 -98265469 - LTR27 LTR ERV1 0 636 4 2942 220 30 80 chr2 152422385 152423201 -98264653 + Charlie1 DNA MER1_type 166 927 -1834 187 216 0 0 chr2 152423211 152423262 -98264592 - MER5C DNA MER1_type -67 257 207 831 219 27 6 chr2 152423271 152423454 -98264400 - MER5A DNA MER1_type 0 189 3 265 282 176 30 chr2 152423464 152423595 -98264259 - MER5A DNA MER1_type 0 189 40 241 254 0 0 chr2 152423627 152423682 -98264172 + MER5B DNA MER1_type 124 178 0 2440 109 0 0 chr2 152425337 152425650 -98262204 + AluSq SINE Alu 1 313 0 23 0 0 0 chr2 152425678 152425701 -98262153 + AT_rich Low_complexity Low_complexity 1 23 0 861 250 50 41 chr2 152426020 152426540 -98261314 - MLT1F1 LTR MaLR 0 542 1 361 367 0 7 chr2 152426543 152426682 -98261172 - MIR SINE MIR -113 149 12 710 214 130 21 chr2 152428717 152428909 -98258945 - MIR SINE MIR -3 259 47 1249 143 33 0 chr2 152431582 152431792 -98256062 - MER1B DNA MER1_type 0 339 123 26 0 0 0 chr2 152432003 152432029 -98255825 + AT_rich Low_complexity Low_complexity 1 26 0 344 309 65 0 chr2 152433324 152433447 -98254407 - MIR SINE MIR -13 249 119 632 219 20 7 chr2 152433972 152434118 -98253736 - MER105 DNA DNA -50 154 7 187 252 134 79 chr2 152434918 152435045 -98252809 - MIR SINE MIR -69 193 60 270 0 0 0 chr2 152435360 152435390 -98252464 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 345 385 42 0 chr2 152435449 152435592 -98252262 - L2 LINE L2 -9 3263 3115 276 371 71 0 chr2 152436538 152436678 -98251176 - L2 LINE L2 0 3272 3123 2160 119 0 3 chr2 152436888 152437183 -98250671 + AluSx SINE Alu 1 294 -18 1108 181 0 45 chr2 152437578 152437821 -98250033 + LTR26E LTR ERV1 216 447 -175 26 0 0 0 chr2 152437963 152437989 -98249865 + AT_rich Low_complexity Low_complexity 1 26 0 703 71 61 0 chr2 152438327 152438426 -98249428 + L1PA13 LINE L1 6057 6161 -2 205 176 0 0 chr2 152438466 152438500 -98249354 - L2 LINE L2 -10 3303 3270 370 193 56 62 chr2 152438789 152438950 -98248904 + MER112 DNA MER1_type 2 161 -99 204 67 0 0 chr2 152438950 152438980 -98248874 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 258 327 39 59 chr2 152439073 152439226 -98248628 + MIR SINE MIR 14 163 -99 24 0 0 0 chr2 152440636 152440660 -98247194 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr2 152441450 152441479 -98246375 + AT_rich Low_complexity Low_complexity 1 29 0 3425 134 7 13 chr2 152441668 152442213 -98245641 + L1PA15 LINE L1 5624 6165 0 217 323 43 0 chr2 152442255 152442348 -98245506 - L2 LINE L2 -249 3023 2927 510 261 78 21 chr2 152442542 152442684 -98245170 - MER5B DNA MER1_type -25 153 4 829 224 10 66 chr2 152442798 152442849 -98245005 + MER5A DNA MER1_type 1 53 -136 1721 207 43 6 chr2 152442849 152443201 -98244653 - MLT1A1 LTR MaLR 0 365 1 829 224 10 66 chr2 152443201 152443345 -98244509 + MER5A DNA MER1_type 53 185 -4 385 301 26 64 chr2 152444017 152444175 -98243679 + MIR SINE MIR 3 153 -62 2052 142 3 7 chr2 152444383 152444685 -98243169 + AluSx SINE Alu 1 301 -11 697 259 69 33 chr2 152445102 152445407 -98242447 - MER46C DNA MER2_type -19 319 4 2382 84 3 7 chr2 152445963 152446262 -98241592 + AluSx SINE Alu 1 298 -14 386 281 116 8 chr2 152446396 152446517 -98241337 - L2 LINE L2 0 3272 3139 431 313 39 6 chr2 152446670 152446849 -98241005 - MIR SINE MIR 0 262 78 750 216 158 34 chr2 152446853 152447145 -98240709 + MER46C DNA MER2_type 1 328 -10 308 263 144 8 chr2 152447225 152447343 -98240511 + MER94 DNA DNA 1 134 0 257 272 79 61 chr2 152447664 152447778 -98240076 - L2 LINE L2 -802 2512 2397 3087 81 23 20 chr2 152448047 152448490 -98239364 - MLT2A1 LTR ERVL 0 444 1 41759 78 6 3 chr2 152448490 152454125 -98233729 - HERVL-A1 LTR ERVL 0 5654 1 3036 94 23 7 chr2 152454125 152454562 -98233292 - MLT2A1 LTR ERVL 0 444 1 615 171 57 85 chr2 152454613 152454789 -98233065 + MER34B LTR ERV1 13 183 -382 233 286 0 0 chr2 152454798 152454847 -98233007 - L2 LINE L2 -10 3262 3214 13851 198 62 11 chr2 152455498 152462014 -98225840 - L1PB1 LINE L1 -14 6853 6 1092 212 13 17 chr2 152462389 152462625 -98225229 + AluJo SINE Alu 70 304 -8 4180 78 4 0 chr2 152463761 152464312 -98223542 - MER41A LTR ERV1 -1 553 1 261 163 0 0 chr2 152464675 152464724 -98223130 + CT-rich Low_complexity Low_complexity 3 51 0 2273 131 146 40 chr2 152464729 152465257 -98222597 + MER34C LTR ERV1 1 584 -1 207 161 0 0 chr2 152465258 152465289 -98222565 + polypyrimidine Low_complexity Low_complexity 4 34 0 213 278 19 0 chr2 152465756 152465810 -98222044 + (TG)n Simple_repeat Simple_repeat 2 56 0 1553 187 6 47 chr2 152466048 152466411 -98221443 - MER4D LTR ERV1 -11 892 545 308 162 118 30 chr2 152466409 152466515 -98221339 - MER4E LTR ERV1 -588 284 62 * 1368 189 57 7 chr2 152466501 152466781 -98221073 - MER49 LTR ERV1 -629 294 1 198 91 0 0 chr2 152467386 152467419 -98220435 + (CA)n Simple_repeat Simple_repeat 2 34 0 264 280 167 23 chr2 152467498 152467630 -98220224 - MIR SINE MIR -55 207 57 3071 183 107 15 chr2 152467646 152468338 -98219516 - LTR28 LTR ERV1 0 1020 119 607 178 208 6 chr2 152468349 152468509 -98219345 - LTR28 LTR ERV1 -286 178 1 4152 138 82 10 chr2 152469445 152469964 -98217890 - LTR39 LTR ERV1 0 783 194 3204 167 36 57 chr2 152469964 152470706 -98217148 - LTR8A LTR ERV1 0 727 1 4152 138 82 10 chr2 152470706 152470916 -98216938 - LTR39 LTR ERV1 -589 194 1 263 366 0 22 chr2 152471371 152471505 -98216349 + MIR SINE MIR 81 211 -51 2696 150 56 4 chr2 152471686 152472200 -98215654 + LTR49 LTR ERV1 1 541 -54 209 108 27 0 chr2 152472200 152472237 -98215617 + (TG)n Simple_repeat Simple_repeat 2 39 0 642 310 52 62 chr2 152472360 152472632 -98215222 + L2 LINE L2 2005 2273 -1041 2355 139 26 3 chr2 152472632 152473013 -98214841 - MLT1B LTR MaLR 0 390 1 642 310 52 62 chr2 152473013 152473146 -98214708 + L2 LINE L2 2273 2406 -908 452 260 75 20 chr2 152473225 152473371 -98214483 + L2 LINE L2 3160 3313 0 494 308 28 0 chr2 152473379 152473522 -98214332 - MIR SINE MIR -83 179 33 22 0 0 0 chr2 152474539 152474561 -98213293 + AT_rich Low_complexity Low_complexity 1 22 0 320 372 7 0 chr2 152474684 152474829 -98213025 - L1M4 LINE L1 -1510 4636 4491 967 198 64 0 chr2 152474848 152475050 -98212804 - MER20 DNA MER1_type -4 215 1 375 293 14 66 chr2 152475066 152475327 -98212527 + L1MC4a LINE L1 5663 5822 -340 312 250 83 0 chr2 152475386 152475470 -98212384 - FLAM SINE Alu -5 128 38 32 26 0 0 chr2 152475675 152475714 -98212140 + AT_rich Low_complexity Low_complexity 1 39 0 2406 172 12 93 chr2 152475763 152476334 -98211520 + MLT2B3 LTR ERVL 2 526 -28 2501 195 25 2 chr2 152476345 152476792 -98211062 + LTR32 LTR ERVL 15 471 0 237 200 0 0 chr2 152476792 152476825 -98211029 + MLT2B3 LTR ERVL 522 554 0 3877 180 69 34 chr2 152477321 152477732 -98210122 - MER54A LTR ERVL -2 899 504 3688 115 21 60 chr2 152477732 152478351 -98209503 - LTR49 LTR ERV1 0 595 1 3877 180 69 34 chr2 152478351 152478809 -98209045 - MER54A LTR ERVL -397 504 14 2220 136 35 44 chr2 152478816 152479183 -98208671 + THE1B LTR MaLR 1 364 0 1305 288 82 19 chr2 152480053 152480515 -98207339 + HAL1 LINE L1 455 945 -1562 1253 217 63 50 chr2 152480543 152480925 -98206929 - MER74B LTR ERVL -36 586 200 1470 155 158 49 chr2 152480925 152481254 -98206600 - MLT1A1 LTR MaLR 0 365 1 7473 192 43 87 chr2 152481254 152482279 -98205575 - MLT1A1-int LTR MaLR 0 1735 822 2305 124 51 28 chr2 152482279 152482635 -98205219 - THE1B LTR MaLR 0 364 1 7473 192 43 87 chr2 152482635 152483423 -98204431 - MLT1A1-int LTR MaLR -913 822 1 1261 233 101 53 chr2 152483423 152483801 -98204053 - MSTD LTR MaLR 0 396 1 885 226 20 10 chr2 152483801 152483996 -98203858 - MER74B LTR ERVL -418 204 8 330 26 0 0 chr2 152483996 152484035 -98203819 + (CA)n Simple_repeat Simple_repeat 2 40 0 1319 278 75 22 chr2 152484493 152484946 -98202908 - MLT1G LTR MaLR -8 582 106 457 118 12 12 chr2 152485495 152485580 -98202274 + L1PB4 LINE L1 6069 6153 -3 2605 259 59 51 chr2 152485824 152486945 -98200909 + HAL1 LINE L1 1042 2171 -336 2138 166 21 40 chr2 152486980 152487057 -98200797 + MER34B LTR ERV1 145 222 -343 2089 119 0 20 chr2 152487057 152487360 -98200494 + AluSx SINE Alu 1 297 -15 2138 166 21 40 chr2 152487360 152487711 -98200143 + MER34B LTR ERV1 222 565 0 4509 127 12 5 chr2 152487994 152488642 -98199212 - MER39B LTR ERV1 0 653 1 207 329 32 25 chr2 152488747 152488905 -98198949 - L2 LINE L2 -189 3083 2925 4170 101 45 13 chr2 152488996 152489558 -98198296 + MER39B LTR ERV1 3 588 -65 2227 115 3 3 chr2 152489558 152489863 -98197991 - AluSx SINE Alu -7 305 1 4170 101 45 13 chr2 152489863 152489926 -98197928 + MER39B LTR ERV1 588 648 -5 4713 148 45 14 chr2 152490129 152490886 -98196968 - LTR39 LTR ERV1 0 783 4 621 226 68 0 chr2 152493228 152493418 -98194436 - LTR37B LTR ERV1 -1 467 265 794 205 99 0 chr2 152493577 152493748 -98194106 - MER5A DNA MER1_type 0 189 2 233 278 0 0 chr2 152493749 152493803 -98194051 - LTR37B LTR ERV1 -392 76 23 774 236 14 72 chr2 152493870 152494146 -98193708 + LTR37A LTR ERV1 23 282 -144 513 167 58 22 chr2 152494184 152494322 -98193532 + LTR37A LTR ERV1 282 424 -2 2498 66 16 0 chr2 152495472 152495777 -98192077 - AluY SINE Alu -1 310 1 2132 189 148 90 chr2 152496039 152496125 -98191729 - LTR8A LTR ERV1 0 727 647 2287 114 0 0 chr2 152496125 152496424 -98191430 - AluSq SINE Alu -14 299 1 2132 189 148 90 chr2 152496424 152497024 -98190830 - LTR8A LTR ERV1 -80 647 1 336 204 21 11 chr2 152497100 152497193 -98190661 + MER53 DNA DNA 89 182 -7 * 350 184 26 0 chr2 152497133 152497209 -98190645 - MER53 DNA DNA -111 78 1 2792 145 57 17 chr2 152497491 152497961 -98189893 + LTR26B LTR ERV1 43 531 0 308 364 76 5 chr2 152498203 152498387 -98189467 + L3b LINE CR1 1168 1364 -219 1282 205 137 54 chr2 152498562 152498987 -98188867 + MER31B LTR ERV1 1 460 -6 1638 202 10 35 chr2 152499086 152499580 -98188274 + MER74A LTR ERVL 1 558 0 3322 105 9 0 chr2 152499665 152500095 -98187759 + MER57B LTR ERV1 1 434 0 248 289 70 26 chr2 152500438 152500552 -98187302 + L3b LINE CR1 1368 1486 -97 212 247 22 34 chr2 152500616 152500705 -98187149 + (TATATG)n Simple_repeat Simple_repeat 2 89 0 587 225 60 33 chr2 152501021 152501172 -98186682 + MLT1J1 LTR MaLR 13 167 -279 336 102 0 0 chr2 152502026 152502075 -98185779 + (CA)n Simple_repeat Simple_repeat 1 49 0 282 242 16 121 chr2 152503602 152503726 -98184128 + L2 LINE L2 3197 3307 -6 518 300 57 14 chr2 152505698 152505908 -98181946 + L1ME LINE L1 5512 5730 -391 288 308 13 0 chr2 152506498 152506576 -98181278 + L2 LINE L2 3194 3272 0 1189 136 48 35 chr2 152506900 152507009 -98180845 + L1MA9 LINE L1 6051 6157 -155 444 62 0 0 chr2 152507009 152507073 -98180781 + (CA)n Simple_repeat Simple_repeat 1 64 0 1189 136 48 35 chr2 152507073 152507191 -98180663 + L1MA9 LINE L1 6157 6281 -31 3693 143 9 7 chr2 152508644 152509226 -98178628 + L1MB3 LINE L1 5598 6180 -3 199 304 0 0 chr2 152509628 152509674 -98178180 + L2 LINE L2 3238 3283 -30 439 123 25 0 chr2 152509678 152509759 -98178095 + GA-rich Low_complexity Low_complexity 2 84 0 1861 146 43 98 chr2 152509835 152510184 -98177670 + MLT2D LTR ERVL 20 344 -70 528 45 0 0 chr2 152510184 152510251 -98177603 + (TC)n Simple_repeat Simple_repeat 2 68 0 1861 146 43 98 chr2 152510251 152510319 -98177535 + MLT2D LTR ERVL 344 414 0 514 316 0 0 chr2 152510456 152510608 -98177246 + MER117 DNA MER1_type 1 152 -45 257 341 40 60 chr2 152511450 152511702 -98176152 - L2 LINE L2 -185 3087 2841 1118 181 0 22 chr2 152512726 152512908 -98174946 - MER45A DNA AcHobo 0 178 1 631 283 24 15 chr2 152514107 152514312 -98173542 + MIR SINE MIR 50 256 -6 353 267 225 25 chr2 152515045 152515382 -98172472 + MLT1J LTR MaLR 1 487 -128 326 322 48 14 chr2 152515595 152515741 -98172113 + MIR SINE MIR 4 154 -108 301 253 72 12 chr2 152515846 152515929 -98171925 + L2 LINE L2 3171 3258 -14 230 312 188 7 chr2 152516018 152516156 -98171698 - MER117 DNA MER1_type 0 197 35 180 378 37 22 chr2 152516631 152516766 -98171088 + MIR SINE MIR 106 242 -20 498 33 0 0 chr2 152517317 152517377 -98170477 + (CA)n Simple_repeat Simple_repeat 2 61 0 190 336 78 17 chr2 152517928 152518044 -98169810 + MIR3 SINE MIR 3 125 -83 346 285 39 39 chr2 152518130 152518260 -98169594 + MIR3 SINE MIR 69 198 -10 2284 132 31 11 chr2 152518383 152518740 -98169114 - THE1C LTR MaLR -11 364 1 189 0 0 0 chr2 152518836 152518857 -98168997 + (TC)n Simple_repeat Simple_repeat 1 21 0 716 177 24 0 chr2 152518873 152518997 -98168857 + L1PB4 LINE L1 6030 6156 0 619 257 47 7 chr2 152520337 152520505 -98167349 + MIR SINE MIR 6 172 -75 35 0 0 0 chr2 152520800 152520835 -98167019 + AT_rich Low_complexity Low_complexity 1 35 0 189 94 0 0 chr2 152521911 152521943 -98165911 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 243 0 0 0 chr2 152522810 152522837 -98165017 + (CA)n Simple_repeat Simple_repeat 2 28 0 2000 118 0 38 chr2 152523039 152523352 -98164502 + AluSx SINE Alu 1 301 -11 219 36 0 0 chr2 152523477 152523505 -98164349 + (TG)n Simple_repeat Simple_repeat 2 29 0 2395 133 8 0 chr2 152523509 152523869 -98163985 - L1MB3 LINE L1 -7 6176 5814 1120 124 43 48 chr2 152523869 152524078 -98163776 - AluJo SINE Alu -22 290 83 724 181 7 1 chr2 152524078 152524230 -98163624 - L1MB3 LINE L1 -346 5822 5668 1942 227 37 7 chr2 152524301 152524737 -98163117 - MER110A LTR ERV1 -1 467 19 336 309 21 0 chr2 152524806 152524903 -98162951 - MIR SINE MIR -162 100 2 1370 233 48 27 chr2 152525322 152525652 -98162202 + MER58B DNA MER1_type 5 341 0 2985 169 81 6 chr2 152526410 152526930 -98160924 - MER89 LTR ERV1 0 559 1 187 325 138 0 chr2 152526953 152527033 -98160821 + L2 LINE L2 3180 3270 -2 22 0 0 0 chr2 152529576 152529598 -98158256 + AT_rich Low_complexity Low_complexity 1 22 0 261 241 19 0 chr2 152531358 152531412 -98156442 - MLT1K LTR MaLR -348 240 186 2161 179 21 24 chr2 152532499 152532967 -98154887 - MLT1C LTR MaLR 0 467 1 1788 163 22 4 chr2 152533500 152533798 -98154056 - AluJo SINE Alu 0 303 1 234 81 0 0 chr2 152533813 152533850 -98154004 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 2313 112 0 0 chr2 152534047 152534343 -98153511 - AluSg SINE Alu -14 296 1 215 316 0 53 chr2 152535429 152535505 -98152349 - L2 LINE L2 -37 3235 3164 24 53 0 0 chr2 152535930 152535968 -98151886 + AT_rich Low_complexity Low_complexity 1 38 0 828 65 22 60 chr2 152536484 152536669 -98151185 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 218 194 18 0 chr2 152536672 152536786 -98151068 + GA-rich Low_complexity Low_complexity 1 116 0 283 318 49 41 chr2 152536786 152536998 -98150856 + MIR SINE MIR 15 232 -30 2351 112 0 3 chr2 152536998 152537311 -98150543 + AluSx SINE Alu 1 312 0 283 318 49 41 chr2 152537311 152537341 -98150513 + MIR SINE MIR 232 260 -2 1960 124 7 4 chr2 152537387 152537662 -98150192 - AluSx SINE Alu -36 276 1 267 275 42 84 chr2 152537841 152537983 -98149871 + MER5A DNA MER1_type 54 189 0 672 279 93 0 chr2 152538533 152538748 -98149106 + MIR SINE MIR 27 261 -1 283 321 9 46 chr2 152538757 152538866 -98148988 - MIR3 SINE MIR -46 162 58 228 254 32 0 chr2 152539860 152539923 -98147931 + MIR SINE MIR 183 247 -15 462 225 47 54 chr2 152539946 152540075 -98147779 + FLAM_A SINE Alu 1 128 -5 1924 187 59 37 chr2 152540898 152541390 -98146464 + MLT1D LTR MaLR 1 503 -2 259 293 98 29 chr2 152541884 152542058 -98145796 - LTR16C LTR ERVL -1 490 305 248 248 7 22 chr2 152543411 152543548 -98144306 + CT-rich Low_complexity Low_complexity 2 136 0 347 184 35 0 chr2 152544380 152544467 -98143387 - L1MB7 LINE L1 0 6184 6095 24 53 0 0 chr2 152544469 152544507 -98143347 + AT_rich Low_complexity Low_complexity 1 38 0 485 128 32 0 chr2 152544507 152544601 -98143253 - L1MB4 LINE L1 -13 6167 6071 24 32 0 0 chr2 152545307 152545338 -98142516 + AT_rich Low_complexity Low_complexity 1 31 0 290 187 0 0 chr2 152545488 152545563 -98142291 + L1MA7 LINE L1 6215 6289 -2 4354 145 42 76 chr2 152545621 152546373 -98141481 + L1MA7 LINE L1 5044 5793 -498 345 155 0 0 chr2 152546373 152546431 -98141423 + Alu SINE Alu 235 292 -10 4354 145 42 76 chr2 152546431 152546910 -98140944 + L1MA7 LINE L1 5793 6287 -4 685 154 0 110 chr2 152548203 152548385 -98139469 + L1MA7 LINE L1 6090 6251 -40 576 0 0 0 chr2 152548385 152548449 -98139405 + (TA)n Simple_repeat Simple_repeat 2 65 0 270 0 0 0 chr2 152548464 152548494 -98139360 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 414 0 0 0 chr2 152548748 152548794 -98139060 + (TA)n Simple_repeat Simple_repeat 1 46 0 34 24 0 0 chr2 152548807 152548848 -98139006 + AT_rich Low_complexity Low_complexity 1 41 0 2334 122 0 0 chr2 152549100 152549412 -98138442 + AluSx SINE Alu 1 312 0 210 150 0 0 chr2 152552165 152552205 -98135649 + (A)n Simple_repeat Simple_repeat 1 40 0 28 48 0 0 chr2 152552405 152552447 -98135407 + AT_rich Low_complexity Low_complexity 1 42 0 287 176 0 44 chr2 152552704 152552772 -98135082 + MER34C LTR ERV1 29 93 -492 1273 212 53 50 chr2 152552804 152553291 -98134563 + MER34B LTR ERV1 62 526 -16 971 273 69 12 chr2 152553879 152554311 -98133543 + L1MC4a LINE L1 5664 6120 -1688 658 175 0 25 chr2 152555029 152555149 -98132705 - AluSg/x SINE Alu -20 292 176 295 245 81 18 chr2 152555433 152555607 -98132247 - MLT1L LTR MaLR -5 610 395 929 288 15 27 chr2 152555695 152556032 -98131822 - MLT1I LTR MaLR -16 393 61 275 338 0 12 chr2 152556130 152556210 -98131644 - MLT1K LTR MaLR -377 211 133 216 158 0 0 chr2 152556974 152557012 -98130842 + (CA)n Simple_repeat Simple_repeat 1 38 0 32 26 0 0 chr2 152557902 152557941 -98129913 + AT_rich Low_complexity Low_complexity 1 39 0 5434 153 64 13 chr2 152558265 152559480 -98128374 + L1MC1 LINE L1 5039 6317 -16 231 59 15 73 chr2 152560222 152560236 -98127618 + (TAAAA)n Simple_repeat Simple_repeat 2 15 -50 2189 101 7 3 chr2 152560236 152560523 -98127331 + AluSx SINE Alu 1 288 -24 231 59 15 73 chr2 152560523 152560576 -98127278 + (TAAAA)n Simple_repeat Simple_repeat 15 65 0 2354 84 0 3 chr2 152560807 152561104 -98126750 + AluSg SINE Alu 1 296 -14 23 54 0 0 chr2 152561979 152562016 -98125838 + AT_rich Low_complexity Low_complexity 1 37 0 2337 80 0 0 chr2 152562016 152562305 -98125549 + AluY SINE Alu 1 289 -22 306 73 0 0 chr2 152562397 152562438 -98125416 + (TA)n Simple_repeat Simple_repeat 2 42 0 25 0 0 0 chr2 152563034 152563059 -98124795 + AT_rich Low_complexity Low_complexity 1 25 0 303 323 21 0 chr2 152563624 152563717 -98124137 + L1MC4 LINE L1 6613 6707 -1335 225 275 48 53 chr2 152563743 152563932 -98123922 + L1ME LINE L1 5258 5445 -725 2391 92 0 0 chr2 152564550 152564856 -98122998 - AluSp SINE Alu -7 306 1 230 203 68 27 chr2 152565128 152565202 -98122652 - MLT1A1 LTR MaLR -7 358 282 1585 146 25 4 chr2 152565379 152565653 -98122201 - MLT1A1 LTR MaLR -85 280 1 465 253 78 27 chr2 152565874 152566131 -98121723 - HAL1 LINE L1 -105 2402 2133 189 74 0 0 chr2 152566349 152566376 -98121478 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 711 289 62 25 chr2 152566478 152566597 -98121257 - L1ME LINE L1 -554 5608 5495 219 69 0 0 chr2 152566597 152566626 -98121228 + (CA)n Simple_repeat Simple_repeat 2 30 0 396 0 0 0 chr2 152566631 152566675 -98121179 + (TA)n Simple_repeat Simple_repeat 1 44 0 711 289 62 25 chr2 152566675 152566907 -98120947 - L1ME LINE L1 -670 5492 5270 1569 165 53 0 chr2 152566907 152567173 -98120681 - AluJb SINE Alu -32 280 1 711 289 62 25 chr2 152567173 152567504 -98120350 - L1ME LINE L1 -892 5270 4884 204 122 0 0 chr2 152567527 152567568 -98120286 + (A)n Simple_repeat Simple_repeat 1 41 0 252 0 0 0 chr2 152567744 152567772 -98120082 + (CA)n Simple_repeat Simple_repeat 1 28 0 1564 259 116 31 chr2 152567861 152568465 -98119389 + L1MEc LINE L1 1060 1611 -4785 2170 119 0 3 chr2 152568465 152568758 -98119096 + AluSq SINE Alu 6 297 -16 1564 259 116 31 chr2 152568758 152569244 -98118610 + L1MEc LINE L1 1611 2243 -4153 2968 163 34 7 chr2 152569245 152569915 -98117939 + L1MA4A LINE L1 5522 6260 -40 1578 207 3 30 chr2 152569939 152570238 -98117616 + AluJo SINE Alu 1 291 -21 2549 235 69 25 chr2 152570261 152571309 -98116545 + L1MEc LINE L1 2190 3283 -2932 301 218 0 0 chr2 152571315 152571370 -98116484 + Tigger7 DNA MER2_type 1 55 -2432 305 352 21 21 chr2 152571380 152571525 -98116329 + L1MEc LINE L1 3286 3430 -2785 892 98 93 11 chr2 152571528 152571852 -98116002 + LTR7 LTR ERV1 1 450 0 12571 140 12 24 chr2 152571852 152574572 -98113282 + HERVH LTR ERV1 1 2995 -4718 2524 144 0 40 chr2 152574551 152575022 -98112832 + HERVH LTR ERV1 3140 3591 -4122 * 1152 111 6 0 chr2 152575016 152575196 -98112658 + HERVH LTR ERV1 3811 3991 -3722 * 13177 122 3 5 chr2 152575223 152577293 -98110561 + HERVH LTR ERV1 3993 6016 -1697 3707 89 5 16 chr2 152577286 152577849 -98110005 + HERVH LTR ERV1 7157 7713 0 * 2020 89 70 6 chr2 152577849 152578215 -98109639 + LTR7 LTR ERV1 1 450 0 14094 137 6 19 chr2 152578337 152580833 -98107021 + HERVH LTR ERV1 1530 3993 -3720 895 201 11 11 chr2 152580816 152581042 -98106812 + HERVH LTR ERV1 3955 5130 -1961 * 2318 75 7 0 chr2 152581042 152581347 -98106507 + L1PA8 LINE L1 5864 6170 -2 189 0 0 0 chr2 152582798 152582819 -98105035 + (CA)n Simple_repeat Simple_repeat 2 22 0 1743 238 33 68 chr2 152583315 152583615 -98104239 - L1ME3A LINE L1 -12 6092 5783 1463 171 46 0 chr2 152583615 152583919 -98103935 - L1MA4 LINE L1 -3 6297 5980 1743 238 33 68 chr2 152583919 152584342 -98103512 - L1ME3A LINE L1 -321 5783 5394 1280 283 76 10 chr2 152584364 152584957 -98102897 - L1ME3A LINE L1 -1887 4193 3562 294 264 30 102 chr2 152585362 152585597 -98102257 - L1ME3A LINE L1 -5847 223 6 33 0 0 0 chr2 152586347 152586380 -98101474 + AT_rich Low_complexity Low_complexity 1 33 0 1707 188 42 14 chr2 152586866 152587223 -98100631 + MER39 LTR ERV1 341 707 0 1972 152 3 16 chr2 152587885 152588194 -98099660 - AluJo SINE Alu -7 305 1 14004 131 39 10 chr2 152588327 152590440 -98097414 - Tigger1 DNA MER2_type 0 2418 229 4186 75 15 0 chr2 152590440 152590986 -98096868 - MER41A LTR ERV1 0 554 1 14004 131 39 10 chr2 152590986 152591222 -98096632 - Tigger1 DNA MER2_type -2189 229 1 190 271 0 0 chr2 152591900 152591948 -98095906 + L2 LINE L2 3256 3303 -10 26 0 0 0 chr2 152591971 152591997 -98095857 + AT_rich Low_complexity Low_complexity 1 26 0 1294 190 99 51 chr2 152592111 152592584 -98095270 + LTR54B LTR ERV1 1 496 -2 225 262 0 0 chr2 152593315 152593357 -98094497 - L3 LINE CR1 -110 1467 1426 1515 208 30 46 chr2 152593453 152593938 -98093916 + MER39 LTR ERV1 21 682 -25 242 235 66 78 chr2 152594048 152594214 -98093640 + L2 LINE L2 3150 3313 0 508 310 53 16 chr2 152595300 152595487 -98092367 + MIR SINE MIR 21 214 -48 2283 136 8 70 chr2 152595496 152595982 -98091872 + LTR32 LTR ERVL 15 470 -1 268 285 0 26 chr2 152595993 152596144 -98091710 + (TTA)n Simple_repeat Simple_repeat 3 149 0 350 283 162 61 chr2 152596892 152597090 -98090764 - MIR SINE MIR -14 248 31 487 279 26 26 chr2 152597335 152597489 -98090365 + L2 LINE L2 3160 3313 0 225 0 0 0 chr2 152598794 152598819 -98089035 + (A)n Simple_repeat Simple_repeat 1 25 0 209 218 0 36 chr2 152599236 152599291 -98088563 + CT-rich Low_complexity Low_complexity 2 54 0 235 240 40 0 chr2 152599704 152599754 -98088100 - L2 LINE L2 -1897 1417 1366 416 242 66 82 chr2 152600704 152601084 -98086770 - L1MCa LINE L1 -5016 1925 1552 636 251 48 5 chr2 152601108 152601295 -98086559 + MER58C DNA MER1_type 21 215 0 1664 226 80 37 chr2 152601295 152601924 -98085930 - L1MCa LINE L1 -4947 1476 821 405 302 91 55 chr2 152602109 152602531 -98085323 - L1MCa LINE L1 -5912 511 106 2296 104 0 3 chr2 152602531 152602828 -98085026 + AluSp SINE Alu 1 296 -17 195 42 0 0 chr2 152602831 152602855 -98084999 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 405 302 91 55 chr2 152602855 152602921 -98084933 - L1MCa LINE L1 -6318 105 1 10426 157 15 104 chr2 152603322 152605942 -98081912 + L1M4c LINE L1 1 2407 -4761 2299 103 3 22 chr2 152605956 152606275 -98081579 + AluSq SINE Alu 1 313 0 597 262 2 18 chr2 152606275 152606555 -98081299 + L1M4c LINE L1 3119 3393 -3774 22 70 0 0 chr2 152607229 152607272 -98080582 + AT_rich Low_complexity Low_complexity 1 43 0 543 271 17 118 chr2 152607272 152607807 -98080047 - Charlie7 DNA MER1_type -1918 694 214 284 155 35 0 chr2 152607867 152607925 -98079929 + L1MB4 LINE L1 5110 5169 -977 3173 172 41 12 chr2 152607980 152608816 -98079038 + L1MB4 LINE L1 5110 5962 -218 12701 175 27 19 chr2 152608918 152612581 -98075273 + L1MA5 LINE L1 2638 6345 -191 2268 85 0 10 chr2 152612581 152612874 -98074980 + AluSc SINE Alu 1 290 -19 12701 175 27 19 chr2 152612874 152613066 -98074788 + L1MA5 LINE L1 6345 6534 -2 23 0 0 0 chr2 152613066 152613089 -98074765 + AT_rich Low_complexity Low_complexity 1 23 0 199 225 0 0 chr2 152613883 152613923 -98073931 + L3 LINE CR1 1531 1570 -7 1093 183 83 0 chr2 152614596 152614837 -98073017 + L1MB4 LINE L1 5919 6179 -1 1681 176 0 21 chr2 152614947 152615236 -98072618 - AluJb SINE Alu -29 283 1 188 270 135 14 chr2 152615696 152615770 -98072084 - L3b LINE CR1 -18 1565 1483 5559 142 23 17 chr2 152616529 152618226 -98069628 + L1MA5 LINE L1 4588 6298 -2 259 277 12 12 chr2 152618271 152618354 -98069500 + MIR SINE MIR 72 154 -108 2192 103 3 0 chr2 152620557 152620848 -98067006 + AluSx SINE Alu 1 292 -20 280 343 112 0 chr2 152620917 152621060 -98066794 + MIR3 SINE MIR 43 201 -7 1986 146 0 23 chr2 152621784 152622085 -98065769 + AluJo SINE Alu 1 294 -18 384 194 21 2 chr2 152623204 152623308 -98064546 + Ricksha DNA DNA 4 154 -1081 1482 181 84 29 chr2 152623542 152623885 -98063969 + LTR44 LTR ERV1 29 390 -129 1990 120 125 33 chr2 152623885 152623957 -98063897 - MSTA LTR MaLR 0 428 364 4216 80 5 10 chr2 152623957 152624533 -98063321 + L1PA11 LINE L1 5600 6172 -2 1990 120 125 33 chr2 152624533 152624852 -98063002 - MSTA LTR MaLR -64 364 1 834 111 0 0 chr2 152624853 152624979 -98062875 + LTR44 LTR ERV1 387 512 -7 217 195 0 0 chr2 152625696 152625737 -98062117 + L2 LINE L2 3271 3311 -2 731 268 21 16 chr2 152628099 152628293 -98059561 - MIR SINE MIR -20 242 48 2554 246 33 29 chr2 152628496 152629397 -98058457 + L1MD2 LINE L1 4426 5330 -816 3708 210 79 23 chr2 152629443 152629600 -98058254 + L1MD2 LINE L1 5295 5442 -917 2357 61 0 35 chr2 152629600 152629913 -98057941 + AluY SINE Alu 1 302 -9 3708 210 79 23 chr2 152629913 152630751 -98057103 + L1MD2 LINE L1 5442 6346 -13 2309 113 0 3 chr2 152631376 152631687 -98056167 + AluSg SINE Alu 1 310 0 691 150 15 15 chr2 152633641 152633774 -98054080 + MLT1A2 LTR MaLR 1 133 -232 1893 158 0 7 chr2 152633819 152634110 -98053744 + AluJb SINE Alu 10 298 -14 309 82 0 0 chr2 152634140 152634189 -98053665 + (TC)n Simple_repeat Simple_repeat 2 50 0 838 161 0 88 chr2 152634229 152634421 -98053433 + MLT1A2 LTR MaLR 189 363 -11 2725 68 0 0 chr2 152634497 152634848 -98053006 + L1PA8 LINE L1 5819 6169 -3 588 287 112 14 chr2 152634953 152635176 -98052678 - MIR SINE MIR -11 251 7 1271 281 6 11 chr2 152635485 152635838 -98052016 + MLT1I LTR MaLR 59 409 0 886 143 86 34 chr2 152635885 152636060 -98051794 + MER20 DNA MER1_type 25 208 -11 312 294 38 60 chr2 152636151 152636386 -98051468 - MLT1J LTR MaLR -52 459 230 315 274 26 60 chr2 152638042 152638159 -98049695 + MIR SINE MIR 19 131 -77 1302 209 65 19 chr2 152638172 152638497 -98049357 - MLT1F LTR MaLR -6 536 197 300 246 121 52 chr2 152638658 152638890 -98048964 - HAL1 LINE L1 0 2507 2260 1357 192 42 42 chr2 152639214 152639501 -98048353 + AluJo SINE Alu 1 287 -25 3061 145 34 7 chr2 152639527 152640086 -98047768 - L1MB3 LINE L1 -15 6168 5595 1371 168 61 2 chr2 152640087 152640496 -98047358 - L1MB3 LINE L1 -695 5485 5059 1246 211 4 0 chr2 152640596 152640875 -98046979 - L1MB3 LINE L1 -1059 5087 4808 1090 220 181 44 chr2 152640877 152641381 -98046473 - HAL1 LINE L1 -433 2074 1502 261 385 109 4 chr2 152641409 152641648 -98046206 - L2 LINE L2 -571 2743 2480 5007 122 8 31 chr2 152641786 152642625 -98045229 - MER4D LTR ERV1 0 903 84 21 95 0 0 chr2 152642625 152642688 -98045166 + AT_rich Low_complexity Low_complexity 1 63 0 1197 49 0 0 chr2 152642792 152642936 -98044918 - L1PA7 LINE L1 -8 6146 6003 492 134 12 0 chr2 152642938 152643020 -98044834 - MER4D LTR ERV1 -788 84 2 194 61 0 30 chr2 152643156 152643189 -98044665 + (CA)n Simple_repeat Simple_repeat 1 32 0 269 294 39 10 chr2 152643245 152643347 -98044507 + L3 LINE CR1 1472 1576 -1 2549 160 22 13 chr2 152643452 152643951 -98043903 + MER41B LTR ERV1 130 474 -12 196 167 19 19 chr2 152644819 152644873 -98042981 + (TA)n Simple_repeat Simple_repeat 1 54 0 382 305 21 89 chr2 152644936 152645126 -98042728 - MIR SINE MIR -40 222 46 535 252 126 34 chr2 152645281 152645758 -98042096 + L1ME3A LINE L1 4755 5275 -871 807 301 65 20 chr2 152645790 152646377 -98041477 + L1ME3A LINE L1 5338 5950 -220 245 179 0 60 chr2 152646609 152646676 -98041178 + GA-rich Low_complexity Low_complexity 3 65 0 21 36 0 0 chr2 152646736 152646764 -98041090 + AT_rich Low_complexity Low_complexity 1 28 0 1563 170 55 13 chr2 152646786 152647168 -98040686 + L1MCa LINE L1 2056 2453 -3973 23 0 0 0 chr2 152647571 152647594 -98040260 + AT_rich Low_complexity Low_complexity 1 23 0 256 206 82 0 chr2 152648060 152648157 -98039697 - L1MC5 LINE L1 -596 7365 7261 911 238 91 78 chr2 152648369 152648482 -98039372 - L2 LINE L2 -58 3255 3145 2062 144 0 3 chr2 152648482 152648795 -98039059 + AluJb SINE Alu 1 312 0 911 238 91 78 chr2 152648795 152649269 -98038585 - L2 LINE L2 -168 3145 2655 1468 265 24 20 chr2 152649283 152649777 -98038077 + L1MCb LINE L1 1 496 -5549 1135 203 50 34 chr2 152651305 152651626 -98036228 - MLT1C LTR MaLR -8 459 134 442 182 48 39 chr2 152651692 152651844 -98036010 - MLT1C LTR MaLR -305 162 3 768 160 30 15 chr2 152652177 152652308 -98035546 + FLAM_A SINE Alu 1 133 0 22 0 0 0 chr2 152652723 152652745 -98035109 + AT_rich Low_complexity Low_complexity 1 22 0 304 265 65 120 chr2 152653528 152654004 -98033850 + LTR16A LTR ERVL 1 450 0 331 316 22 14 chr2 152654303 152654442 -98033412 - L3b LINE CR1 -334 1249 1110 2210 108 3 13 chr2 152655361 152655675 -98032179 - AluY SINE Alu 0 311 1 225 357 9 18 chr2 152655718 152655830 -98032024 - L2 LINE L2 -4 3309 3199 435 92 0 0 chr2 152656226 152656291 -98031563 + (T)n Simple_repeat Simple_repeat 1 65 0 335 187 154 0 chr2 152656391 152656482 -98031372 + Ricksha DNA DNA 185 289 -2957 * 3221 117 19 39 chr2 152656479 152657044 -98030810 + Ricksha DNA DNA 1820 2373 -873 2808 145 41 0 chr2 152657050 152657560 -98030294 + Ricksha DNA DNA 2501 3031 -220 1768 132 8 69 chr2 152657561 152657924 -98029930 - MER61A LTR ERV1 -2 341 1 715 91 55 0 chr2 152657924 152658034 -98029820 - MER61A-int LTR ERV1 0 5217 5102 503 180 26 35 chr2 152658037 152658208 -98029646 + Ricksha DNA DNA 3098 3249 -5 497 267 63 57 chr2 152659568 152659668 -98028186 + MLT1J2 LTR MaLR 149 247 -203 545 245 147 6 chr2 152659668 152659831 -98028023 + MER5A DNA MER1_type 4 189 0 497 267 63 57 chr2 152659831 152660030 -98027824 + MLT1J2 LTR MaLR 247 450 0 2980 100 28 0 chr2 152661999 152662430 -98025424 + L1PB4 LINE L1 5701 6143 -13 1882 179 3 0 chr2 152662451 152662742 -98025112 + AluJb SINE Alu 1 292 -20 2227 158 82 18 chr2 152662916 152663441 -98024413 + LTR49 LTR ERV1 1 611 -11 749 189 7 14 chr2 152663448 152663591 -98024263 - FRAM SINE Alu -30 146 5 422 264 82 7 chr2 152663641 152663780 -98024074 - MIR SINE MIR -62 146 1 1164 303 93 66 chr2 152663800 152664359 -98023495 + MER21B LTR ERV1 11 559 -304 3724 119 48 8 chr2 152664359 152664970 -98022884 + MER41B LTR ERV1 1 635 0 1164 303 93 66 chr2 152664970 152665232 -98022622 + MER21B LTR ERV1 559 813 -50 487 319 75 0 chr2 152666280 152666468 -98021386 - MIR SINE MIR -37 225 24 247 350 21 31 chr2 152666930 152667027 -98020827 + L3 LINE CR1 1475 1570 -7 189 237 0 0 chr2 152667105 152667143 -98020711 - L2 LINE L2 -13 3300 3263 282 274 255 20 chr2 152668157 152668310 -98019544 - MER5A DNA MER1_type 0 189 1 511 156 0 0 chr2 152669345 152669422 -98018432 - AluSp SINE Alu -95 218 142 2047 149 16 0 chr2 152669430 152669738 -98018116 - AluSq SINE Alu 0 313 1 21 57 0 0 chr2 152670498 152670533 -98017321 + AT_rich Low_complexity Low_complexity 1 35 0 978 213 29 143 chr2 152670660 152671107 -98016747 + MSTD LTR MaLR 1 396 0 404 161 0 11 chr2 152671188 152671275 -98016579 + (TA)n Simple_repeat Simple_repeat 1 86 0 3167 208 42 18 chr2 152671314 152672097 -98015757 - L1MB7 LINE L1 -30 6154 5353 249 57 0 0 chr2 152672109 152672144 -98015710 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2139 107 3 3 chr2 152672147 152672437 -98015417 - AluSq SINE Alu -23 290 1 195 339 45 45 chr2 152672715 152672827 -98015027 + L2 LINE L2 3197 3308 -5 381 350 19 19 chr2 152672986 152673146 -98014708 + MER5A DNA MER1_type 9 168 -21 2465 11 0 4 chr2 152673701 152673975 -98013879 + AluYa5 SINE Alu 39 311 0 491 229 13 72 chr2 152674200 152674353 -98013501 + MLT1G1 LTR MaLR 1 144 -451 315 229 48 0 chr2 152674425 152674508 -98013346 + MLT1H1 LTR MaLR 202 288 -302 367 247 93 74 chr2 152674592 152674754 -98013100 + MLT1H1 LTR MaLR 431 555 0 404 232 138 14 chr2 152674776 152674914 -98012940 + L2 LINE L2 3151 3305 -8 818 56 112 0 chr2 152675115 152675240 -98012614 + MER85 DNA T2_type 1 139 0 346 247 39 0 chr2 152676661 152676738 -98011116 + Tigger3(Golem) DNA MER2_type 1 80 -2949 532 162 50 0 chr2 152676851 152676950 -98010904 + Tigger3(Golem) DNA MER2_type 2920 3023 -6 1366 243 11 32 chr2 152677004 152677378 -98010476 - MLT1A2 LTR MaLR -4 370 5 3121 132 45 2 chr2 152677858 152678395 -98009459 + MER34B LTR ERV1 1 560 -5 451 274 41 69 chr2 152681242 152681476 -98006378 - MIR SINE MIR -25 237 15 661 152 0 0 chr2 152682324 152682429 -98005425 - FRAM SINE Alu -12 164 60 2807 251 83 25 chr2 152682534 152682658 -98005196 + MER69B DNA AcHobo 4 119 -2407 198 0 0 0 chr2 152682658 152682680 -98005174 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2807 251 83 25 chr2 152682680 152683253 -98004601 + MER69B DNA AcHobo 119 773 -1753 802 226 0 0 chr2 152683253 152683417 -98004437 - FRAM SINE Alu -2 164 1 2807 251 83 25 chr2 152683417 152683668 -98004186 + MER69B DNA AcHobo 773 1008 -218 2092 112 14 3 chr2 152683776 152684072 -98003782 - AluSx SINE Alu -13 299 1 2561 4 0 4 chr2 152684854 152685134 -98002720 + AluY SINE Alu 28 306 -5 1446 187 126 25 chr2 152685292 152685618 -98002236 - MLT1A1 LTR MaLR -11 354 5 550 288 81 30 chr2 152686762 152687321 -98000533 - L1ME4a LINE L1 -4 6117 5531 823 293 56 32 chr2 152687820 152688069 -97999785 - MIR SINE MIR 0 262 8 1918 137 10 3 chr2 152688587 152688879 -97998975 + AluSq SINE Alu 1 294 -19 198 71 0 0 chr2 152689843 152689871 -97997983 + (ATG)n Simple_repeat Simple_repeat 3 30 0 348 353 8 8 chr2 152690170 152690292 -97997562 + MIR SINE MIR 30 151 -57 357 246 8 16 chr2 152690595 152690717 -97997137 + (TCTA)n Simple_repeat Simple_repeat 2 122 0 1862 156 7 10 chr2 152690992 152691287 -97996567 - AluJo SINE Alu -14 298 5 2094 222 55 8 chr2 152691468 152691958 -97995896 - MLT1F LTR MaLR -15 527 15 649 119 56 21 chr2 152693284 152693427 -97994427 + L1MA8 LINE L1 6142 6289 -2 24 0 0 0 chr2 152693427 152693451 -97994403 + AT_rich Low_complexity Low_complexity 1 24 0 2393 105 19 3 chr2 152693484 152693846 -97994008 - L1PA11 LINE L1 0 6174 5807 1771 205 63 97 chr2 152693951 152694599 -97993255 - MLT1E2 LTR MaLR 0 626 1 21 57 0 0 chr2 152694959 152694994 -97992860 + AT_rich Low_complexity Low_complexity 1 35 0 663 228 24 0 chr2 152695801 152696007 -97991847 + MER69B DNA AcHobo 1016 1226 0 22 56 0 0 chr2 152696502 152696538 -97991316 + AT_rich Low_complexity Low_complexity 1 36 0 387 0 0 0 chr2 152697266 152697309 -97990545 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 278 192 137 0 chr2 152697357 152697430 -97990424 - MIR SINE MIR -70 192 110 2442 74 0 0 chr2 152697596 152697906 -97989948 + AluY SINE Alu 1 310 -1 1165 152 49 168 chr2 152698404 152698754 -97989100 - AluJb SINE Alu 0 302 1 2711 82 6 0 chr2 152701713 152702066 -97985788 - THE1A LTR MaLR 0 355 1 1070 294 126 41 chr2 152703753 152704358 -97983496 + L2 LINE L2 1712 2367 -947 4200 109 35 6 chr2 152704733 152705368 -97982486 - MER39B LTR ERV1 0 653 1 5092 55 3 0 chr2 152705819 152706454 -97981400 - L1PA7 LINE L1 -2 6152 5516 253 393 56 0 chr2 152707356 152707463 -97980391 - L2 LINE L2 -4 3268 3156 618 212 68 0 chr2 152708579 152708711 -97979143 - L2 LINE L2 0 3313 3173 243 0 0 0 chr2 152709599 152709626 -97978228 + (CA)n Simple_repeat Simple_repeat 2 28 0 716 294 91 24 chr2 152711469 152711765 -97976089 + L2 LINE L2 2988 3303 -10 2731 97 11 3 chr2 152711861 152712233 -97975621 - THE1C LTR MaLR 0 375 1 22 35 0 0 chr2 152712349 152712378 -97975476 + AT_rich Low_complexity Low_complexity 1 29 0 2309 86 6 37 chr2 152712672 152712787 -97975067 - L1PA8 LINE L1 -2 6170 6053 1971 89 22 19 chr2 152712787 152713056 -97974798 - AluY SINE Alu -15 296 27 2309 86 6 37 chr2 152713056 152713289 -97974565 - L1PA8 LINE L1 -119 6053 5833 442 242 242 8 chr2 152713540 152713780 -97974074 + HAL1 LINE L1 42 337 -2170 4430 138 34 63 chr2 152714543 152715402 -97972452 + L1MA8 LINE L1 4507 5389 -902 1743 171 3 36 chr2 152715402 152715711 -97972143 + AluSx SINE Alu 1 299 -13 4430 138 34 63 chr2 152715711 152716116 -97971738 + L1MA8 LINE L1 5389 5804 -487 539 55 0 0 chr2 152716116 152716187 -97971667 + L1PA11 LINE L1 6097 6169 -5 4430 138 34 63 chr2 152716187 152716730 -97971124 + L1MA8 LINE L1 5804 6249 -42 26 30 0 0 chr2 152716802 152716835 -97971019 + AT_rich Low_complexity Low_complexity 1 33 0 424 302 57 26 chr2 152716925 152717582 -97970272 + L1MCc LINE L1 1226 2118 -4942 2104 133 0 0 chr2 152717676 152717978 -97969876 + AluSx SINE Alu 1 302 -10 353 314 33 0 chr2 152718115 152718236 -97969618 + L2 LINE L2 3189 3313 0 194 279 73 0 chr2 152718675 152718743 -97969111 + MIR3 SINE MIR 85 157 -51 262 196 98 78 chr2 152718866 152718968 -97968886 + Charlie8 DNA MER1_type 79 182 -2235 2217 220 70 15 chr2 152718968 152719578 -97968276 - LTR48B LTR ERV1 0 644 1 1870 170 93 20 chr2 152719752 152720151 -97967703 - MSTA LTR MaLR 0 428 1 238 173 39 58 chr2 152720259 152720311 -97967543 + MIR3 SINE MIR 112 162 -46 515 321 14 21 chr2 152720509 152720799 -97967055 + L1MCc LINE L1 2239 2526 -4596 279 215 44 130 chr2 152721007 152721300 -97966554 + HAL1 LINE L1 825 1092 -1415 3370 61 5 0 chr2 152721302 152721731 -97966123 + L1PA7 LINE L1 5724 6154 0 1042 190 22 0 chr2 152721731 152721910 -97965944 + AluJb SINE Alu 130 312 0 2857 239 60 65 chr2 152722122 152723531 -97964323 + HAL1 LINE L1 1100 2501 -6 727 303 22 13 chr2 152725458 152725689 -97962165 + MIR SINE MIR 2 234 -28 508 286 38 16 chr2 152726340 152726525 -97961329 - MIR SINE MIR -3 259 71 27 0 0 0 chr2 152727433 152727460 -97960394 + AT_rich Low_complexity Low_complexity 1 27 0 221 333 11 0 chr2 152728545 152728632 -97959222 + CT-rich Low_complexity Low_complexity 1 88 0 819 243 35 5 chr2 152728972 152729174 -97958680 + MER58A DNA MER1_type 2 209 -15 230 236 36 0 chr2 152729587 152729642 -97958212 + MIR SINE MIR 113 169 -93 185 146 73 24 chr2 152729650 152729691 -97958163 + L2 LINE L2 3254 3296 -17 229 379 33 46 chr2 152729848 152730001 -97957853 - L2 LINE L2 0 3272 3122 504 317 116 9 chr2 152732355 152732579 -97955275 - MIR SINE MIR 0 262 15 246 354 53 18 chr2 152732978 152733091 -97954763 + MIR3 SINE MIR 43 159 -49 267 277 32 0 chr2 152733096 152733190 -97954664 + MER117 DNA MER1_type 6 102 -95 21 0 0 0 chr2 152733586 152733607 -97954247 + AT_rich Low_complexity Low_complexity 1 21 0 1773 224 33 17 chr2 152733620 152734080 -97953774 - MLT1C LTR MaLR 0 467 1 682 250 79 62 chr2 152736040 152736380 -97951474 + MSTD LTR MaLR 51 396 0 273 285 69 6 chr2 152736806 152736983 -97950871 + L1MCa LINE L1 996 1357 -5059 240 289 52 21 chr2 152736996 152737190 -97950664 + L1MCa LINE L1 1530 1729 -4697 275 268 59 85 chr2 152737219 152737372 -97950482 - MIR3 SINE MIR -46 162 14 1937 158 3 17 chr2 152737469 152737767 -97950087 - AluSx SINE Alu -18 294 1 309 311 60 26 chr2 152739759 152739910 -97947944 + L1ME LINE L1 5483 5638 -483 262 247 63 35 chr2 152740773 152740947 -97946907 + Charlie7 DNA MER1_type 2434 2612 0 1701 166 14 7 chr2 152741484 152741773 -97946081 + AluSx SINE Alu 1 291 -21 687 221 70 22 chr2 152742532 152742804 -97945050 - MER45R DNA AcHobo 0 1581 1297 5017 198 8 1 chr2 152742804 152743906 -97943948 + L1 LINE L1 3738 4847 -1299 5169 140 18 4 chr2 152743921 152745130 -97942724 + L1PA16 LINE L1 4949 6166 0 805 186 109 5 chr2 152745132 152745325 -97942529 - MER45R DNA AcHobo -276 1305 1093 1469 222 10 44 chr2 152745394 152745516 -97942338 - L1MEc LINE L1 -5490 906 781 1769 169 23 20 chr2 152745516 152745818 -97942036 - AluJb SINE Alu -9 303 1 1469 222 10 44 chr2 152745818 152746100 -97941754 - L1MEc LINE L1 -5615 781 516 306 257 71 0 chr2 152746140 152746210 -97941644 + MER45R DNA AcHobo 447 521 -1060 613 264 50 42 chr2 152746211 152746693 -97941161 + L1MEc LINE L1 1170 1655 -4908 517 201 84 108 chr2 152746696 152746910 -97940944 + MER34C LTR ERV1 4 212 -373 284 235 61 41 chr2 152746947 152747045 -97940809 + LTR48 LTR ERV1 382 481 -306 380 219 96 14 chr2 152747083 152747260 -97940594 + LTR48 LTR ERV1 378 542 0 561 252 47 74 chr2 152747283 152747623 -97940231 + L1MEc LINE L1 1527 2009 -4554 2246 97 10 10 chr2 152747655 152747964 -97939890 + AluSc SINE Alu 1 309 0 3298 117 30 4 chr2 152747964 152748503 -97939351 + LTR24B LTR ERV1 18 570 -6 7333 143 48 78 chr2 152748537 152748634 -97939220 - Tigger1 DNA MER2_type 0 2418 2320 2407 118 20 8 chr2 152748634 152748990 -97938864 - THE1B LTR MaLR -2 362 3 7333 143 48 78 chr2 152748990 152749095 -97938759 - Tigger1 DNA MER2_type -98 2320 2213 1883 168 14 0 chr2 152749095 152749380 -97938474 + AluJo SINE Alu 1 289 -23 7333 143 48 78 chr2 152749380 152750504 -97937350 - Tigger1 DNA MER2_type -205 2213 1057 1899 148 0 28 chr2 152750504 152750822 -97937032 + AluJo SINE Alu 1 309 -3 2213 75 13 33 chr2 152750832 152751137 -97936717 + AluY SINE Alu 1 299 -12 7333 143 48 78 chr2 152751137 152751535 -97936319 - Tigger1 DNA MER2_type -1370 1048 733 273 250 0 0 chr2 152751635 152751703 -97936151 - MER34 LTR ERV1 -472 70 3 2114 95 14 0 chr2 152751792 152752207 -97935647 + AluSp SINE Alu 1 419 0 2402 241 97 42 chr2 152752208 152753361 -97934493 + L1MEc LINE L1 2278 3366 -3016 1586 128 97 0 chr2 152753361 152753618 -97934236 + AluSx SINE Alu 1 282 -30 2402 241 97 42 chr2 152753618 152753867 -97933987 + L1MEc LINE L1 3366 3600 -2782 2687 150 14 2 chr2 152753867 152754288 -97933566 + MSTB LTR MaLR 1 426 0 2402 241 97 42 chr2 152754288 152754987 -97932867 + L1MEc LINE L1 3600 4591 -1791 287 97 0 166 chr2 152755375 152755391 -97932463 + L1M2 LINE L1 5724 5741 -569 914 125 0 12 chr2 152755391 152755551 -97932303 - L1MA5 LINE L1 0 6300 6143 287 97 0 166 chr2 152755551 152755580 -97932274 + L1M2 LINE L1 5741 5773 -537 1850 156 19 36 chr2 152755580 152755888 -97931966 + AluJo SINE Alu 1 303 -9 287 97 0 166 chr2 152755888 152755948 -97931906 + L1M2 LINE L1 5773 5813 -497 1409 122 200 8 chr2 152756034 152756289 -97931565 + AluSg1 SINE Alu 1 304 -5 36 53 0 0 chr2 152758251 152758308 -97929546 + AT_rich Low_complexity Low_complexity 1 57 0 299 237 141 7 chr2 152758433 152758568 -97929286 - L1ME3A LINE L1 0 6170 6018 2367 72 16 0 chr2 152758941 152759246 -97928608 + AluY SINE Alu 1 310 -1 1351 335 101 16 chr2 152760022 152760877 -97926977 + L2 LINE L2 1913 2839 -475 1520 200 7 7 chr2 152760926 152761206 -97926648 + AluJo SINE Alu 1 280 -32 482 287 173 5 chr2 152761521 152761723 -97926131 + MIR SINE MIR 21 256 -6 21 0 0 0 chr2 152761963 152761984 -97925870 + AT_rich Low_complexity Low_complexity 1 21 0 365 213 37 96 chr2 152762261 152762397 -97925457 - MER94 DNA DNA -1 133 6 1637 191 10 27 chr2 152762458 152762756 -97925098 + AluJo SINE Alu 1 293 -19 2394 97 0 0 chr2 152762756 152763067 -97924787 + AluY SINE Alu 1 311 0 4548 140 49 6 chr2 152763490 152764327 -97923527 + L1MC2 LINE L1 5347 6219 -125 658 280 65 0 chr2 152764370 152764538 -97923316 - MIR SINE MIR -75 187 9 194 311 22 11 chr2 152764912 152765002 -97922852 + L2 LINE L2 3167 3257 -56 310 290 137 8 chr2 152765150 152765281 -97922573 - MARNA DNA Mariner -423 163 16 354 287 0 40 chr2 152765392 152765493 -97922361 - L2 LINE L2 0 3272 3176 1690 173 20 23 chr2 152766049 152766350 -97921504 - AluJo SINE Alu -12 300 1 244 286 0 0 chr2 152766702 152766765 -97921089 - MLT1I LTR MaLR 0 409 347 242 167 153 0 chr2 152768302 152768374 -97919480 + L1MB2 LINE L1 5529 5611 -510 1050 95 14 14 chr2 152768387 152768535 -97919319 + BC200 scRNA scRNA 6 153 -47 21 0 0 0 chr2 152769633 152769654 -97918200 + AT_rich Low_complexity Low_complexity 1 21 0 687 264 226 20 chr2 152771274 152771761 -97916093 + L2 LINE L2 2722 3312 -1 286 296 15 15 chr2 152771975 152772110 -97915744 + L1MC5 LINE L1 7783 7917 -44 1910 124 84 27 chr2 152773313 152773684 -97914170 + L1MB3 LINE L1 5293 5835 -348 * 5240 98 18 9 chr2 152773639 152774488 -97913366 + L1PB2 LINE L1 5293 6148 -3 1824 166 22 8 chr2 152774492 152774854 -97913000 + L1MB2 LINE L1 5798 6164 -7 432 319 0 7 chr2 152775441 152775585 -97912269 + MER117 DNA MER1_type 1 143 -54 2184 107 7 0 chr2 152776794 152777084 -97910770 - AluSx SINE Alu -20 292 1 21 36 0 0 chr2 152777688 152777716 -97910138 + AT_rich Low_complexity Low_complexity 1 28 0 284 93 0 0 chr2 152778286 152778329 -97909525 + L1PA8 LINE L1 6123 6165 -7 420 55 0 0 chr2 152778833 152778888 -97908966 + (CA)n Simple_repeat Simple_repeat 1 55 0 262 192 19 0 chr2 152780516 152780568 -97907286 + MIR SINE MIR 94 146 -62 183 305 102 0 chr2 152781184 152781243 -97906611 - MIR3 SINE MIR -24 184 120 541 272 92 16 chr2 152781453 152781637 -97906217 - LTR67 LTR ERVL -8 549 352 2331 200 89 23 chr2 152781758 152782362 -97905492 + LTR48B LTR ERV1 1 644 0 212 351 64 43 chr2 152782795 152782889 -97904965 - L2 LINE L2 -22 3250 3155 362 294 18 9 chr2 152783124 152783233 -97904621 - MIR SINE MIR -19 243 134 192 258 16 48 chr2 152783304 152783366 -97904488 - L2 LINE L2 -323 2949 2890 967 200 17 0 chr2 152785283 152785463 -97902391 - MER5A DNA MER1_type 0 189 7 465 270 27 27 chr2 152785550 152785698 -97902156 + MER5B DNA MER1_type 1 148 -30 1454 162 76 3 chr2 152786026 152786340 -97901514 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr2 152788205 152788229 -97899625 + AT_rich Low_complexity Low_complexity 1 24 0 5312 104 25 15 chr2 152788261 152789067 -97898787 - Tigger3b DNA MER2_type -2 1229 416 1867 152 36 39 chr2 152789064 152789353 -97898501 - Tigger3b DNA MER2_type -2666 362 73 * 2364 92 0 0 chr2 152789353 152789648 -97898206 - AluSc SINE Alu -14 295 1 1867 152 36 39 chr2 152789648 152789721 -97898133 - Tigger3b DNA MER2_type -2955 73 1 1002 246 101 4 chr2 152789721 152789997 -97897857 - L1MA9 LINE L1 -77 6235 5933 2307 116 0 0 chr2 152790356 152790659 -97897195 - AluSx SINE Alu -9 303 1 2085 112 17 0 chr2 152791031 152791318 -97896536 + AluSx SINE Alu 4 295 -17 737 225 92 17 chr2 152791780 152791953 -97895901 - MER5A DNA MER1_type 0 189 4 303 346 76 8 chr2 152792349 152792586 -97895268 - MLT1L LTR MaLR -4 611 359 369 291 167 24 chr2 152793475 152793685 -97894169 + MIR SINE MIR 2 241 -21 203 342 108 0 chr2 152794459 152794579 -97893275 + L2 LINE L2 3181 3313 0 279 54 0 0 chr2 152795476 152795513 -97892341 + (TC)n Simple_repeat Simple_repeat 2 38 0 579 238 16 0 chr2 152795711 152795837 -97892017 + LTR67 LTR ERVL 426 553 -4 295 217 130 43 chr2 152795961 152796053 -97891801 - MIR SINE MIR -72 136 37 1756 161 4 11 chr2 152796065 152796345 -97891509 - AluJo SINE Alu -22 290 13 2368 82 3 7 chr2 152797445 152797751 -97890103 + AluSq SINE Alu 1 305 -8 458 270 45 0 chr2 152798048 152798159 -97889695 - L2 LINE L2 -8 3305 3190 249 375 91 0 chr2 152798161 152798249 -97889605 + L2 LINE L2 3137 3232 -40 286 160 60 0 chr2 152798435 152798485 -97889369 - L2 LINE L2 -5 3267 3215 72 47 0 0 chr2 152798951 152799058 -97888796 + AT_rich Low_complexity Low_complexity 1 107 0 2211 103 0 13 chr2 152799225 152799526 -97888328 + AluSg SINE Alu 1 297 -13 1602 176 7 4 chr2 152799542 152799814 -97888040 + L1MC1 LINE L1 6061 6333 0 22 0 0 0 chr2 152801070 152801092 -97886762 + AT_rich Low_complexity Low_complexity 1 22 0 457 268 63 0 chr2 152802524 152802666 -97885188 + L1ME1 LINE L1 6010 6160 -6 291 317 25 33 chr2 152804199 152804319 -97883535 - MIR SINE MIR -97 165 47 2108 104 0 23 chr2 152804418 152804726 -97883128 + AluSx SINE Alu 1 301 -11 225 0 0 0 chr2 152805483 152805508 -97882346 + (A)n Simple_repeat Simple_repeat 1 25 0 982 200 0 0 chr2 152805512 152805682 -97882172 + MIR SINE MIR 20 189 -73 301 259 198 19 chr2 152805682 152805844 -97882010 + L1MC5 LINE L1 7663 7853 -108 1031 176 0 27 chr2 152805850 152806037 -97881817 + AluJb SINE Alu 120 301 -11 8563 185 22 21 chr2 152806137 152807880 -97879974 + L1PA15 LINE L1 3736 5489 -676 2306 108 0 10 chr2 152807880 152808185 -97879669 + AluSx SINE Alu 1 302 -10 8563 185 22 21 chr2 152808185 152808846 -97879008 + L1PA15 LINE L1 5489 6148 -17 1759 197 23 74 chr2 152809329 152809760 -97878094 + MLT1D-int LTR MaLR 963 1371 0 935 198 12 6 chr2 152809760 152809932 -97877922 + MLT1D LTR MaLR 1 173 -332 186 345 57 57 chr2 152810950 152811046 -97876808 - MIR SINE MIR -52 210 115 2551 59 0 0 chr2 152811046 152811350 -97876504 + AluY SINE Alu 1 304 -7 186 345 57 57 chr2 152811350 152811462 -97876392 - MIR SINE MIR -146 116 2 312 183 183 56 chr2 152812489 152812615 -97875239 - L1MC5 LINE L1 -30 7931 7790 922 157 0 0 chr2 152812689 152812829 -97875025 - FLAM_C SINE Alu -3 140 1 397 256 47 35 chr2 152812834 152813006 -97874848 - L1MC5 LINE L1 -280 7681 7508 1613 102 70 56 chr2 152813928 152814212 -97873642 + AluJb SINE Alu 16 303 -9 2119 121 7 7 chr2 152815378 152815675 -97872179 + AluSx SINE Alu 1 297 -15 1297 204 13 0 chr2 152815794 152816029 -97871825 + MER82 DNA MER2_type 25 262 -391 967 200 17 0 chr2 152817258 152817438 -97870416 - MER5A DNA MER1_type 0 189 7 454 277 27 27 chr2 152817525 152817673 -97870181 + MER5B DNA MER1_type 1 148 -30 1463 159 76 3 chr2 152818001 152818315 -97869539 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr2 152820180 152820204 -97867650 + AT_rich Low_complexity Low_complexity 1 24 0 5290 104 25 14 chr2 152820236 152821041 -97866813 - Tigger3b DNA MER2_type -2 1230 417 1867 152 36 39 chr2 152821038 152821327 -97866527 - Tigger3b DNA MER2_type -2666 362 73 * 2373 91 0 0 chr2 152821327 152821623 -97866231 - AluSc SINE Alu -13 296 1 1867 152 36 39 chr2 152821623 152821696 -97866158 - Tigger3b DNA MER2_type -2955 73 1 1002 246 101 4 chr2 152821696 152821972 -97865882 - L1MA9 LINE L1 -77 6235 5933 2307 116 0 0 chr2 152822331 152822634 -97865220 - AluSx SINE Alu -9 303 1 2085 112 17 0 chr2 152823006 152823293 -97864561 + AluSx SINE Alu 4 295 -17 737 225 92 17 chr2 152823754 152823927 -97863927 - MER5A DNA MER1_type 0 189 4 330 345 71 8 chr2 152824323 152824561 -97863293 - MLT1L LTR MaLR -4 611 359 369 291 167 24 chr2 152825448 152825658 -97862196 + MIR SINE MIR 2 241 -21 203 342 108 0 chr2 152826432 152826552 -97861302 + L2 LINE L2 3181 3313 0 279 54 0 0 chr2 152827449 152827486 -97860368 + (TC)n Simple_repeat Simple_repeat 2 38 0 579 238 16 0 chr2 152827684 152827810 -97860044 + LTR67 LTR ERVL 426 553 -4 295 217 130 43 chr2 152827934 152828026 -97859828 - MIR SINE MIR -72 136 37 1756 161 4 11 chr2 152828038 152828318 -97859536 - AluJo SINE Alu -22 290 13 2351 82 3 7 chr2 152829418 152829722 -97858132 + AluSq SINE Alu 1 303 -10 458 270 45 0 chr2 152830019 152830130 -97857724 - L2 LINE L2 -8 3305 3190 249 375 91 0 chr2 152830132 152830220 -97857634 + L2 LINE L2 3137 3232 -40 286 160 60 0 chr2 152830406 152830456 -97857398 - L2 LINE L2 -5 3267 3215 72 47 0 0 chr2 152830921 152831028 -97856826 + AT_rich Low_complexity Low_complexity 1 107 0 2219 103 0 13 chr2 152831195 152831497 -97856357 + AluSg SINE Alu 1 298 -12 1602 176 7 4 chr2 152831513 152831785 -97856069 + L1MC1 LINE L1 6061 6333 0 22 0 0 0 chr2 152833028 152833050 -97854804 + AT_rich Low_complexity Low_complexity 1 22 0 399 227 75 2 chr2 152834481 152834621 -97853233 + L1ME1 LINE L1 6006 6154 -10 282 325 26 26 chr2 152836157 152836271 -97851583 - MIR SINE MIR -97 165 52 2099 104 0 23 chr2 152836377 152836685 -97851169 + AluSx SINE Alu 1 301 -11 993 200 0 0 chr2 152837465 152837635 -97850219 + MIR SINE MIR 20 189 -73 1038 165 10 36 chr2 152837803 152837997 -97849857 + AluJb SINE Alu 120 308 -4 28 71 0 0 chr2 152838056 152838112 -97849742 + AT_rich Low_complexity Low_complexity 1 56 0 391 275 62 31 chr2 152838448 152838577 -97849277 - MIR SINE MIR 0 262 126 2217 93 0 10 chr2 152838577 152838868 -97848986 - AluSg SINE Alu -7 303 16 391 275 62 31 chr2 152838868 152838898 -97848956 - MIR SINE MIR -136 126 98 193 274 43 51 chr2 152838988 152839105 -97848749 - MIR SINE MIR -142 120 5 * 242 284 90 4 chr2 152839104 152839195 -97848659 + MIR SINE MIR 42 135 -86 753 210 17 33 chr2 152839372 152839553 -97848301 + MER5B DNA MER1_type 1 178 0 321 26 0 0 chr2 152839889 152839927 -97847927 + (CA)n Simple_repeat Simple_repeat 1 38 0 2794 19 0 0 chr2 152840730 152841044 -97846810 + AluYb8 SINE Alu 1 314 -4 1034 179 0 6 chr2 152841071 152841239 -97846615 + FAM SINE Alu 1 167 -8 395 339 31 0 chr2 152842371 152842501 -97845353 - MIR3 SINE MIR -39 169 36 332 244 0 0 chr2 152843047 152843125 -97844729 - MER63A DNA MER1_type 0 210 133 1829 196 38 0 chr2 152843190 152843557 -97844297 - MER70A LTR ERVL 0 472 92 677 215 6 31 chr2 152843558 152843721 -97844133 - MER70B LTR ERVL -419 159 1 300 53 0 0 chr2 152843853 152843891 -97843963 + (A)n Simple_repeat Simple_repeat 1 38 0 312 182 11 57 chr2 152845676 152845764 -97842090 - L1ME4a LINE L1 -11 6110 6027 288 103 29 15 chr2 152845840 152845908 -97841946 + (TG)n Simple_repeat Simple_repeat 1 69 0 1436 159 42 4 chr2 152845938 152846202 -97841652 - LTR32 LTR ERVL 0 471 198 333 226 52 61 chr2 152847522 152847637 -97840217 + L2 LINE L2 1559 1672 -1642 324 48 0 0 chr2 152847717 152847759 -97840095 + (CA)n Simple_repeat Simple_repeat 2 43 0 2360 93 54 25 chr2 152848176 152848530 -97839324 - THE1B LTR MaLR 0 364 1 2202 125 0 3 chr2 152849899 152850202 -97837652 + AluSx SINE Alu 1 302 -10 28 48 0 0 chr2 152850511 152850553 -97837301 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 152850651 152850679 -97837175 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr2 152851794 152851822 -97836032 + (A)n Simple_repeat Simple_repeat 1 28 0 27 29 0 0 chr2 152851858 152851892 -97835962 + AT_rich Low_complexity Low_complexity 1 34 0 180 0 0 0 chr2 152852150 152852170 -97835684 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 285 286 141 90 chr2 152852463 152852718 -97835136 - L2 LINE L2 -179 3093 2826 254 0 0 0 chr2 152852783 152852813 -97835041 + MLT2B1 LTR ERVL 479 508 -12 367 341 95 0 chr2 152852838 152852964 -97834890 - L2 LINE L2 -556 2758 2621 1027 218 42 51 chr2 152852966 152853427 -97834427 + MLT2D LTR ERVL 1 464 0 183 353 0 0 chr2 152853436 152853487 -97834367 - L2 LINE L2 -704 2610 2560 417 330 109 53 chr2 152853693 152854069 -97833785 - L2 LINE L2 -842 2472 2076 421 196 34 28 chr2 152854122 152854251 -97833603 - LTR40c LTR ERVL -71 394 279 26 0 0 0 chr2 152856916 152856942 -97830912 + AT_rich Low_complexity Low_complexity 1 26 0 1431 98 0 5 chr2 152857031 152857224 -97830630 + AluSq SINE Alu 122 313 0 2405 58 0 7 chr2 152858351 152858642 -97829212 + AluY SINE Alu 10 298 -13 1454 143 29 6 chr2 152858778 152859252 -97828602 - LTR24B LTR ERV1 -7 569 1 424 278 127 47 chr2 152859540 152859627 -97828227 + L1M4 LINE L1 3794 3873 -2273 1535 129 0 0 chr2 152859627 152859836 -97828018 + AluSx SINE Alu 1 209 -103 424 278 127 47 chr2 152859836 152860047 -97827807 + L1M4 LINE L1 3873 4116 -2030 2136 104 10 0 chr2 152860165 152860453 -97827401 + AluSp SINE Alu 3 293 -20 2334 55 3 0 chr2 152860544 152860837 -97827017 - L1PA6 LINE L1 -11 6143 5850 4318 152 39 0 chr2 152861336 152862140 -97825714 + L1MC3 LINE L1 6944 7778 -7 2251 128 0 0 chr2 152862181 152862493 -97825361 - AluSx SINE Alu 0 312 1 611 252 140 63 chr2 152862582 152862868 -97824986 - HAL1 LINE L1 -892 1615 1308 2920 72 8 0 chr2 152863434 152863835 -97824019 + MER4E LTR ERV1 318 721 -45 209 342 108 0 chr2 152863894 152864014 -97823840 - L2 LINE L2 0 3313 3181 26 0 0 0 chr2 152865315 152865341 -97822513 + AT_rich Low_complexity Low_complexity 1 26 0 1436 102 0 19 chr2 152865396 152865410 -97822444 + AluSq SINE Alu 113 126 -187 186 43 0 0 chr2 152865410 152865433 -97822421 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1436 102 0 19 chr2 152865433 152865623 -97822231 + AluSq SINE Alu 126 313 0 2384 55 3 7 chr2 152866750 152867041 -97820813 + AluY SINE Alu 10 299 -12 1454 143 29 6 chr2 152867177 152867651 -97820203 - LTR24B LTR ERV1 -7 569 1 1535 129 0 0 chr2 152868027 152868236 -97819618 + AluSx SINE Alu 1 209 -103 227 274 43 30 chr2 152868238 152868402 -97819452 + L1M4 LINE L1 3916 4081 -2065 2156 101 10 0 chr2 152868565 152868853 -97819001 + AluSp SINE Alu 3 293 -20 2334 55 3 0 chr2 152868944 152869237 -97818617 - L1PA6 LINE L1 -11 6143 5850 4302 153 39 0 chr2 152869736 152870540 -97817314 + L1MC3 LINE L1 6944 7778 -7 2242 129 0 0 chr2 152870581 152870892 -97816962 - AluSx SINE Alu -1 311 1 2582 260 112 64 chr2 152870981 152871568 -97816286 - HAL1 LINE L1 -892 1615 1057 2253 114 3 0 chr2 152871568 152871875 -97815979 - AluSx SINE Alu -4 308 1 2582 260 112 64 chr2 152871875 152872038 -97815816 - HAL1 LINE L1 -1450 1057 903 1766 143 59 14 chr2 152872038 152872395 -97815459 + L1MB2 LINE L1 5795 6167 -4 2582 260 112 64 chr2 152872395 152873105 -97814749 - HAL1 LINE L1 -1604 903 85 2014 127 0 39 chr2 152873125 152873432 -97814422 + AluSx SINE Alu 1 295 -17 405 296 145 12 chr2 152873570 152873742 -97814112 + MIR SINE MIR 12 206 -56 23 0 0 0 chr2 152874017 152874040 -97813814 + AT_rich Low_complexity Low_complexity 1 23 0 211 194 65 32 chr2 152874194 152874256 -97813598 - L3b LINE CR1 -258 1325 1262 566 256 0 51 chr2 152874387 152874563 -97813291 - L2 LINE L2 -1 3312 3146 1957 113 18 0 chr2 152875251 152875535 -97812319 + AluSx SINE Alu 1 289 -23 1846 153 0 16 chr2 152876094 152876414 -97811440 - MER50 LTR ERV1 -23 711 397 1230 164 32 12 chr2 152876401 152876651 -97811203 - MER50 LTR ERV1 -479 255 1 * 588 177 0 118 chr2 152876734 152876973 -97810881 + L1MC4 LINE L1 6572 6703 -1258 491 296 40 0 chr2 152877146 152877322 -97810532 + L1MC4 LINE L1 6796 6978 -1064 440 324 72 7 chr2 152877576 152877990 -97809864 - L1M4 LINE L1 -1549 4597 4157 225 221 29 29 chr2 152878457 152878525 -97809329 - L1M4 LINE L1 -2100 4046 3979 1888 151 3 17 chr2 152878662 152878960 -97808894 - AluJo SINE Alu -18 294 1 231 274 41 0 chr2 152879076 152879149 -97808705 - MER2 DNA MER2_type 0 345 270 1256 143 5 0 chr2 152879179 152879388 -97808466 - MER2 DNA MER2_type -134 211 2 239 345 61 0 chr2 152879413 152879659 -97808195 - L1M4 LINE L1 -2591 3555 3295 574 282 58 11 chr2 152879734 152880011 -97807843 - HAL1 LINE L1 -832 1675 1386 292 253 21 0 chr2 152880210 152880305 -97807549 + L1ME2 LINE L1 4266 4362 -1784 22 0 0 0 chr2 152880345 152880367 -97807487 + AT_rich Low_complexity Low_complexity 1 22 0 1958 162 0 3 chr2 152880373 152880670 -97807184 + AluJb SINE Alu 1 296 -16 1718 211 35 2 chr2 152880670 152881094 -97806760 + L1ME2 LINE L1 5483 5923 -247 2267 99 13 71 chr2 152881094 152881160 -97806694 - L1PB1 LINE L1 0 6151 6083 2266 82 7 26 chr2 152881160 152881464 -97806390 - AluSp SINE Alu -15 298 1 2267 99 13 71 chr2 152881464 152881790 -97806064 - L1PB1 LINE L1 -68 6083 5782 219 220 0 0 chr2 152881790 152881840 -97806014 + (TA)n Simple_repeat Simple_repeat 1 50 0 376 250 153 22 chr2 152881840 152881996 -97805858 + L1ME2 LINE L1 5901 6098 -66 1737 211 46 102 chr2 152881996 152882583 -97805271 + MLT2B3 LTR ERVL 1 554 0 376 250 153 22 chr2 152882583 152882654 -97805200 + L1ME2 LINE L1 6098 6158 -6 2141 118 0 0 chr2 152882706 152883002 -97804852 - AluSx SINE Alu -16 296 1 456 378 103 24 chr2 152883401 152883526 -97804328 - L1MEd LINE L1 -5510 609 495 1880 141 6 59 chr2 152883526 152883846 -97804008 - AluSx SINE Alu -9 303 1 456 378 103 24 chr2 152883846 152884061 -97803793 - L1MEd LINE L1 -5624 495 242 28 61 0 0 chr2 152884287 152884336 -97803518 + AT_rich Low_complexity Low_complexity 1 49 0 233 243 43 0 chr2 152884339 152884409 -97803445 - MLT1K LTR MaLR -34 554 482 2353 38 14 10 chr2 152884854 152885145 -97802709 + AluY SINE Alu 1 292 -19 248 253 121 11 chr2 152885155 152885246 -97802608 - L3 LINE CR1 -705 872 772 861 39 0 0 chr2 152886061 152886164 -97801690 + AluY SINE Alu 133 235 -76 25 83 0 0 chr2 152886164 152886224 -97801630 + AT_rich Low_complexity Low_complexity 1 60 0 326 74 19 0 chr2 152886389 152886443 -97801411 + (TG)n Simple_repeat Simple_repeat 2 56 0 200 292 0 0 chr2 152888234 152888282 -97799572 + MIR SINE MIR 182 229 -33 1173 190 40 6 chr2 152889278 152889703 -97798151 + MLT1D LTR MaLR 1 505 0 12149 200 22 20 chr2 152889742 152892589 -97795265 + L1PA15 LINE L1 2626 5491 -674 2339 105 0 10 chr2 152892589 152892895 -97794959 + AluSx SINE Alu 1 303 -9 12149 200 22 20 chr2 152892895 152893555 -97794299 + L1PA15 LINE L1 5491 6148 -17 1588 197 23 74 chr2 152894038 152894469 -97793385 + MLT1D-int LTR MaLR 963 1371 0 862 198 12 6 chr2 152894469 152894641 -97793213 + MLT1D LTR MaLR 1 173 -332 201 354 53 53 chr2 152895659 152895755 -97792099 - MIR SINE MIR -52 210 115 2537 62 0 0 chr2 152895755 152896061 -97791793 + AluY SINE Alu 1 306 -5 201 354 53 53 chr2 152896061 152896173 -97791681 - MIR SINE MIR -146 116 2 253 183 183 56 chr2 152897200 152897326 -97790528 - L1MC5 LINE L1 -30 7931 7790 930 157 0 0 chr2 152897400 152897540 -97790314 - FLAM_C SINE Alu -3 140 1 314 256 47 35 chr2 152897545 152897717 -97790137 - L1MC5 LINE L1 -280 7681 7508 1665 110 67 53 chr2 152898625 152898924 -97788930 + AluJb SINE Alu 1 303 -9 2124 121 7 7 chr2 152900090 152900387 -97787467 + AluSx SINE Alu 1 297 -15 1485 226 9 3 chr2 152900506 152900825 -97787029 + MER82 DNA MER2_type 25 345 -308 1082 177 0 21 chr2 152900831 152901017 -97786837 + AluJo SINE Alu 40 221 -91 2259 87 59 0 chr2 152901296 152901584 -97786270 + AluSq SINE Alu 2 306 -7 1166 161 0 76 chr2 152901586 152901822 -97786032 - AluJo SINE Alu -94 218 1 292 167 0 17 chr2 152901823 152901883 -97785971 - MER82 DNA MER2_type -256 397 339 423 183 0 0 chr2 152901890 152901972 -97785882 + AluJo SINE Alu 224 305 -7 547 223 295 0 chr2 152901973 152902166 -97785688 + MER82 DNA MER2_type 396 645 -8 201 259 0 0 chr2 152902491 152902549 -97785305 + A-rich Low_complexity Low_complexity 1 58 0 1407 118 31 4 chr2 152902611 152903045 -97784809 + LTR54 LTR ERV1 5 510 0 282 278 210 37 chr2 152903663 152903698 -97784156 - MIR SINE MIR -71 191 163 4247 70 13 0 chr2 152903698 152904245 -97783609 - MER41A LTR ERV1 0 554 1 282 278 210 37 chr2 152904245 152904371 -97783483 - MIR SINE MIR -99 163 2 5829 52 28 0 chr2 152904440 152905185 -97782669 - MER4E LTR ERV1 0 766 1 57 28 0 0 chr2 152905344 152905415 -97782439 + AT_rich Low_complexity Low_complexity 1 71 0 184 298 71 24 chr2 152905504 152905588 -97782266 - L2 LINE L2 -650 2664 2577 2000 93 4 0 chr2 152905680 152905939 -97781915 + AluSx SINE Alu 40 299 -13 1247 137 0 0 chr2 152905942 152906117 -97781737 + AluSq SINE Alu 133 307 -6 1843 171 122 109 chr2 152906285 152906599 -97781255 - LTR57-int LTR ERVL -3763 1580 693 2223 181 66 18 chr2 152906599 152907162 -97780692 - MER65-int LTR ERV1 -2721 2150 1561 641 215 51 46 chr2 152907226 152907463 -97780391 - MER34 LTR ERV1 -271 271 34 180 77 0 0 chr2 152907585 152907611 -97780243 + (TTTTTG)n Simple_repeat Simple_repeat 4 29 0 298 115 0 58 chr2 152907725 152907777 -97780077 - LTR57-int LTR ERVL -4992 351 303 2029 179 62 34 chr2 152908258 152908406 -97779448 - MER65C LTR ERV1 0 461 319 2466 67 3 22 chr2 152908406 152908718 -97779136 - AluY SINE Alu -5 306 1 2029 179 62 34 chr2 152908718 152909017 -97778837 - MER65C LTR ERV1 -142 319 1 2396 70 0 10 chr2 152909351 152909652 -97778202 + AluY SINE Alu 2 299 -12 336 411 38 0 chr2 152909694 152909903 -97777951 + MIR SINE MIR 31 247 -15 1795 157 29 0 chr2 152911276 152911556 -97776298 + AluJo SINE Alu 1 288 -24 22 0 0 0 chr2 152911936 152911958 -97775896 + AT_rich Low_complexity Low_complexity 1 22 0 1080 261 182 57 chr2 152912191 152913313 -97774541 + L2 LINE L2 2013 3311 -2 315 49 0 0 chr2 152913323 152913364 -97774490 + (TC)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr2 152914139 152914160 -97773694 + AT_rich Low_complexity Low_complexity 1 21 0 2236 108 0 10 chr2 152914168 152914463 -97773391 + AluSx SINE Alu 1 292 -20 25 31 0 0 chr2 152914493 152914525 -97773329 + AT_rich Low_complexity Low_complexity 1 32 0 285 278 24 41 chr2 152914826 152914995 -97772859 + L1MC4a LINE L1 4860 5025 -1121 2209 121 3 0 chr2 152914998 152915296 -97772558 - AluSx SINE Alu -13 299 1 31 0 0 0 chr2 152915394 152915425 -97772429 + AT_rich Low_complexity Low_complexity 1 31 0 2043 118 14 0 chr2 152915583 152915871 -97771983 + AluSq SINE Alu 12 303 -10 339 44 0 0 chr2 152916342 152916387 -97771467 + (CA)n Simple_repeat Simple_repeat 2 46 0 2314 79 0 3 chr2 152916444 152916736 -97771118 + AluSp SINE Alu 1 291 -22 2290 97 7 3 chr2 152916822 152917132 -97770722 + AluSq SINE Alu 1 311 -2 21 36 0 0 chr2 152917406 152917434 -97770420 + AT_rich Low_complexity Low_complexity 1 28 0 1919 141 0 17 chr2 152917448 152917747 -97770107 + AluJb SINE Alu 1 294 -18 2061 118 29 13 chr2 152917895 152918201 -97769653 + AluSx SINE Alu 1 311 -1 1992 132 24 0 chr2 152918396 152918691 -97769163 + AluSx SINE Alu 1 302 -10 2014 101 0 7 chr2 152918882 152919159 -97768695 - AluSg SINE Alu 0 310 36 1588 124 136 0 chr2 152919160 152919418 -97768436 - AluSx SINE Alu -8 294 2 384 296 124 75 chr2 152922026 152922479 -97765375 + L1MC4a LINE L1 5351 5825 -1983 1981 120 27 3 chr2 152922481 152922773 -97765081 + AluSx SINE Alu 5 303 -9 267 198 386 0 chr2 152922786 152922887 -97764967 + L2 LINE L2 2215 2354 -960 191 290 335 19 chr2 152922937 152923541 -97764313 + L2 LINE L2 2214 3030 -283 1133 67 0 0 chr2 152923541 152923690 -97764164 + LTR3b LTR ERVK 7 155 -282 2227 96 0 10 chr2 152924174 152924477 -97763377 + AluSc SINE Alu 1 300 -9 272 264 95 85 chr2 152924683 152924978 -97762876 + L1ME LINE L1 5528 5825 -296 898 294 37 17 chr2 152925124 152925474 -97762380 + MLT1I LTR MaLR 4 360 -49 36 0 0 0 chr2 152925480 152925516 -97762338 + AT_rich Low_complexity Low_complexity 1 36 0 646 130 0 0 chr2 152926536 152926636 -97761218 + AluSg/x SINE Alu 203 302 -7 851 176 0 0 chr2 152927179 152927310 -97760544 - AluSq/x SINE Alu -182 131 1 614 285 85 20 chr2 152927314 152927621 -97760233 + MLT1I LTR MaLR 82 407 -2 2302 87 30 0 chr2 152928526 152928824 -97759030 - AluSx SINE Alu -5 307 1 201 307 67 0 chr2 152928932 152929007 -97758847 + L2 LINE L2 3141 3220 -52 317 345 24 33 chr2 152929993 152930328 -97757526 - L2 LINE L2 -540 2774 2353 3943 146 6 16 chr2 152931459 152932151 -97755703 + L1MB3 LINE L1 5499 6183 0 708 284 76 0 chr2 152932156 152932353 -97755501 + MIR SINE MIR 20 231 -31 203 61 30 0 chr2 152932526 152932559 -97755295 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 2057 125 3 0 chr2 152932562 152932850 -97755004 - AluSx SINE Alu -23 289 1 2442 103 0 0 chr2 152933089 152933401 -97754453 + AluSx SINE Alu 1 312 0 2371 77 0 7 chr2 152933507 152933804 -97754050 - AluSg SINE Alu -15 295 1 1139 131 0 12 chr2 152933903 152934071 -97753783 - AluJb SINE Alu -8 304 139 1879 92 0 4 chr2 152934071 152934311 -97753543 - AluSq SINE Alu -74 239 1 21 36 0 0 chr2 152934976 152935004 -97752850 + AT_rich Low_complexity Low_complexity 1 28 0 1561 183 3 21 chr2 152935101 152935386 -97752468 - AluJo SINE Alu -32 280 1 339 274 145 8 chr2 152936940 152937057 -97750797 + MIR SINE MIR 10 142 -66 439 354 71 0 chr2 152937071 152937269 -97750585 - MIR SINE MIR -3 259 48 362 226 95 28 chr2 152937589 152937775 -97750079 + MIR SINE MIR 15 207 -55 2000 110 21 25 chr2 152938500 152938804 -97749050 - AluSc SINE Alu 0 303 1 2225 102 3 0 chr2 152938952 152939235 -97748619 + AluSq SINE Alu 11 294 -19 247 330 82 33 chr2 152939556 152939738 -97748116 + MIR3 SINE MIR 12 202 -6 2107 107 7 0 chr2 152939877 152940166 -97747688 - AluSg1 SINE Alu -18 291 1 1458 258 84 7 chr2 152940444 152940874 -97746980 - L1ME3A LINE L1 -10 6160 5698 195 69 0 0 chr2 152941466 152941495 -97746359 + (TTG)n Simple_repeat Simple_repeat 2 30 0 203 278 0 0 chr2 152941549 152941603 -97746251 + MIR SINE MIR 77 130 -132 23 0 0 0 chr2 152941853 152941876 -97745978 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 152941984 152942011 -97745843 + AT_rich Low_complexity Low_complexity 1 27 0 2215 104 10 3 chr2 152942169 152942467 -97745387 - AluSx SINE Alu -12 300 1 1490 176 82 15 chr2 152942774 152943103 -97744751 + Charlie4a DNA MER1_type 40 390 -118 1334 82 0 18 chr2 152943104 152943274 -97744580 + AluSg SINE Alu 1 167 -143 597 153 13 127 chr2 152943277 152943334 -97744520 + Charlie4a DNA MER1_type 370 432 -1529 1754 148 35 7 chr2 152943334 152943617 -97744237 - AluJb SINE Alu -21 291 1 597 153 13 127 chr2 152943617 152943716 -97744138 + Charlie4a DNA MER1_type 432 508 0 1220 140 11 72 chr2 152943979 152944243 -97743611 + L1MC3 LINE L1 6710 6957 -828 623 196 56 7 chr2 152944211 152944354 -97743500 + L1MC4 LINE L1 6450 6599 -1443 * 540 45 0 0 chr2 152944385 152944452 -97743402 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 1269 112 0 0 chr2 152944466 152944635 -97743219 + AluSg/x SINE Alu 133 301 -11 1925 199 15 18 chr2 152944645 152945036 -97742818 + L1MC4 LINE L1 6671 7060 -982 2447 235 53 19 chr2 152945045 152945471 -97742383 + L1MC4 LINE L1 7239 7696 -346 1860 205 173 18 chr2 152945471 152946026 -97741828 + LTR48B LTR ERV1 4 644 0 2447 235 53 19 chr2 152946026 152946241 -97741613 + L1MC4 LINE L1 7696 7902 -140 180 77 0 0 chr2 152946295 152946321 -97741533 + (TA)n Simple_repeat Simple_repeat 2 27 0 270 136 0 0 chr2 152946348 152946392 -97741462 + (CA)n Simple_repeat Simple_repeat 1 44 0 1798 183 53 91 chr2 152947139 152947582 -97740272 + MLT1D LTR MaLR 1 422 -83 252 59 0 0 chr2 152947582 152947616 -97740238 + (TG)n Simple_repeat Simple_repeat 1 34 0 1798 183 53 91 chr2 152947616 152947697 -97740157 + MLT1D LTR MaLR 422 505 0 2621 25 0 32 chr2 152947990 152948305 -97739549 + AluY SINE Alu 1 305 -6 730 204 183 50 chr2 152949637 152949877 -97737977 - AluSx SINE Alu -6 306 35 360 192 123 0 chr2 152950417 152950490 -97737364 - MIR SINE MIR -111 151 70 481 230 11 115 chr2 152950560 152950734 -97737120 - MER103 DNA DNA 0 166 11 180 0 0 0 chr2 152951009 152951029 -97736825 + (CA)n Simple_repeat Simple_repeat 2 21 0 206 247 75 96 chr2 152951089 152951226 -97736628 - L2 LINE L2 -188 3084 2949 2049 185 17 6 chr2 152951226 152951583 -97736271 + MLT1A1 LTR MaLR 1 361 -4 823 213 18 6 chr2 152951923 152952092 -97735762 + FRAM SINE Alu 1 168 -8 223 281 256 0 chr2 152952134 152952255 -97735599 + MIR SINE MIR 98 249 -13 23 0 0 0 chr2 152952596 152952619 -97735235 + AT_rich Low_complexity Low_complexity 1 23 0 2256 90 33 0 chr2 152953265 152953444 -97734410 - AluY SINE Alu 0 311 117 268 24 24 24 chr2 152953444 152953486 -97734368 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 2256 90 33 0 chr2 152953486 152953607 -97734247 - AluY SINE Alu -194 117 1 2657 36 0 3 chr2 152953832 152954137 -97733717 + AluY SINE Alu 1 304 -7 1573 147 18 42 chr2 152954264 152954549 -97733305 - AluJb SINE Alu -26 286 9 358 248 233 0 chr2 152954719 152954852 -97733002 - MER5A DNA MER1_type 0 189 26 7433 110 161 67 chr2 152954855 152956405 -97731449 + pTR5 LTR ERV1 743 2438 0 1575 209 87 22 chr2 152956596 152957012 -97730842 - LTR47B LTR ERVL 0 443 1 227 324 10 49 chr2 152957656 152957758 -97730096 + MIR3 SINE MIR 1 98 -110 339 200 17 70 chr2 152957836 152957951 -97729903 + MIR SINE MIR 112 220 -42 31 0 0 0 chr2 152957957 152957988 -97729866 + AT_rich Low_complexity Low_complexity 1 31 0 2613 51 0 3 chr2 152958313 152958624 -97729230 - AluY SINE Alu -1 310 1 2025 173 2 2 chr2 152959928 152960398 -97727456 + MLT2B1 LTR ERVL 1 519 -1 2435 113 43 61 chr2 152960720 152961161 -97726693 + L1MA4A LINE L1 5866 6298 -5 2340 91 0 7 chr2 152962507 152962804 -97725050 - AluSc SINE Alu -12 297 3 2415 131 18 59 chr2 152963311 152963602 -97724252 + L1MB3 LINE L1 5758 6026 -157 2352 96 0 10 chr2 152963602 152963916 -97723938 - AluSq SINE Alu -2 311 1 2415 131 18 59 chr2 152963916 152964067 -97723787 + L1MB3 LINE L1 6026 6182 -1 522 214 0 19 chr2 152964334 152964488 -97723366 + GA-rich Low_complexity Low_complexity 2 152 0 327 214 43 0 chr2 152964683 152964753 -97723101 - L3 LINE CR1 -7 1570 1498 27 49 0 0 chr2 152964912 152964953 -97722901 + AT_rich Low_complexity Low_complexity 1 41 0 327 49 0 0 chr2 152965007 152965048 -97722806 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 152965146 152965175 -97722679 + AT_rich Low_complexity Low_complexity 1 29 0 1691 167 51 20 chr2 152965351 152965645 -97722209 + AluJb SINE Alu 1 303 -9 198 299 37 84 chr2 152965805 152965912 -97721942 - L2 LINE L2 -15 3257 3156 967 288 130 36 chr2 152966423 152967185 -97720669 + L2 LINE L2 2460 3310 -3 2332 116 0 0 chr2 152967316 152967626 -97720228 + AluSx SINE Alu 1 310 -2 1234 190 8 0 chr2 152967849 152968096 -97719758 + L1PB1 LINE L1 6 254 -6609 1363 170 146 56 chr2 152968096 152968507 -97719347 + LTR7 LTR ERV1 1 448 -2 2808 127 9 24 chr2 152968511 152968977 -97718877 + HERVH LTR ERV1 1 459 -7254 13516 124 12 36 chr2 152969035 152971286 -97716568 + HERVH LTR ERV1 800 2995 -4718 5566 133 21 8 chr2 152971265 152973001 -97714853 + HERVH LTR ERV1 3140 4834 -2228 * 1553 171 4 0 chr2 152973029 152973298 -97714556 + HERVH LTR ERV1 5747 6016 -1697 * 2853 106 93 54 chr2 152973291 152973827 -97714027 + HERVH LTR ERV1 7157 7713 0 1261 169 139 85 chr2 152973827 152974252 -97713602 + LTR7 LTR ERV1 1 448 -2 15773 188 18 11 chr2 152974256 152975636 -97712218 + L1PB1 LINE L1 250 1618 -5249 2158 115 0 13 chr2 152975636 152975940 -97711914 + AluSq SINE Alu 1 300 -13 15773 188 18 11 chr2 152975940 152975953 -97711901 + L1PB1 LINE L1 1618 1629 -5238 2080 122 0 10 chr2 152975953 152976249 -97711605 + AluSq SINE Alu 1 293 -20 15773 188 18 11 chr2 152976249 152980054 -97707800 + L1PB1 LINE L1 1629 5762 -1105 2412 101 0 0 chr2 152980054 152980362 -97707492 + AluSg SINE Alu 1 308 -2 15773 188 18 11 chr2 152980362 152981472 -97706382 + L1PB1 LINE L1 5762 6862 -5 431 310 60 23 chr2 152981755 152981971 -97705883 - L2 LINE L2 -834 2480 2257 2417 81 0 3 chr2 152982027 152982323 -97705531 + AluSg SINE Alu 1 295 -15 2356 86 7 0 chr2 152982491 152982794 -97705060 + AluSp SINE Alu 1 305 -8 251 314 0 0 chr2 152982847 152982917 -97704937 + (TAA)n Simple_repeat Simple_repeat 2 71 0 457 305 57 11 chr2 152982936 152983113 -97704741 - MIR SINE MIR -28 234 50 598 232 125 37 chr2 152983380 152983708 -97704146 + L1MEc LINE L1 1864 2220 -4176 2356 97 0 6 chr2 152983734 152984045 -97703809 + AluSg SINE Alu 1 309 -1 1088 289 115 36 chr2 152984060 152984590 -97703264 - MLT1E LTR MaLR 0 593 22 319 236 29 53 chr2 152984611 152984818 -97703036 + L1ME2 LINE L1 5748 5991 -173 1090 174 85 40 chr2 152984828 152985094 -97702760 - MSTD LTR MaLR 0 396 52 2004 143 0 3 chr2 152985094 152985388 -97702466 - AluSg SINE Alu -17 293 1 1090 174 85 40 chr2 152985388 152985443 -97702411 - MSTD LTR MaLR -344 52 1 311 178 6 6 chr2 152985507 152985579 -97702275 + L1ME2 LINE L1 6087 6161 -5 22 56 0 0 chr2 152985579 152985615 -97702239 + AT_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr2 152986057 152986091 -97701763 + AT_rich Low_complexity Low_complexity 1 34 0 24 32 0 0 chr2 152986171 152986202 -97701652 + AT_rich Low_complexity Low_complexity 1 31 0 1003 62 0 93 chr2 152986446 152986608 -97701246 + L1PA8 LINE L1 6026 6172 0 1795 176 0 3 chr2 152986864 152987159 -97700695 + AluJb SINE Alu 4 297 -15 860 309 63 50 chr2 152987163 152987257 -97700597 + HAL1 LINE L1 1 92 -2415 1585 167 60 30 chr2 152987257 152987390 -97700464 + AluJo SINE Alu 1 129 -183 189 0 0 0 chr2 152987390 152987411 -97700443 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 1585 167 60 30 chr2 152987411 152987576 -97700278 + AluJo SINE Alu 129 308 -4 860 309 63 50 chr2 152987576 152987588 -97700266 + HAL1 LINE L1 92 102 -2405 2235 101 16 0 chr2 152987588 152987895 -97699959 + AluSx SINE Alu 1 312 0 860 309 63 50 chr2 152987895 152988484 -97699370 + HAL1 LINE L1 102 706 -1801 230 264 110 39 chr2 152988574 152988756 -97699098 + HAL1 LINE L1 841 1035 -1472 257 73 0 24 chr2 152988813 152988854 -97699000 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 397 250 94 39 chr2 152988854 152989034 -97698820 + HAL1 LINE L1 1427 1616 -891 1255 243 52 38 chr2 152989038 152989561 -97698293 + HAL1 LINE L1 1950 2479 -28 22 0 0 0 chr2 152989566 152989588 -97698266 + AT_rich Low_complexity Low_complexity 1 22 0 516 147 28 9 chr2 152989742 152989851 -97698003 - L1MD1 LINE L1 0 6242 6132 1251 176 135 6 chr2 152989861 152990218 -97697636 - L1M4 LINE L1 -583 5591 5197 * 2228 215 57 7 chr2 152990217 152991166 -97696688 - L1MD1 LINE L1 -743 5403 4618 24 32 0 0 chr2 152991171 152991202 -97696652 + AT_rich Low_complexity Low_complexity 1 31 0 577 203 81 8 chr2 152991202 152991325 -97696529 + FLAM_C SINE Alu 1 132 -1 2130 119 0 14 chr2 152991578 152991711 -97696143 + AluSg SINE Alu 2 135 -175 2338 75 44 0 chr2 152991711 152992005 -97695849 + AluY SINE Alu 1 307 -4 2130 119 0 14 chr2 152992005 152992165 -97695689 + AluSg SINE Alu 135 291 -19 234 265 47 100 chr2 152992307 152992824 -97695030 + L1ME4a LINE L1 5539 6037 -84 2510 65 3 0 chr2 152994022 152994332 -97693522 + AluY SINE Alu 1 311 0 3074 267 114 22 chr2 152994526 152995996 -97691858 + HAL1 LINE L1 11 1615 -892 671 255 96 24 chr2 152995998 152996390 -97691464 - LTR33 LTR ERVL -2 519 45 1299 98 0 2 chr2 152996436 152996691 -97691163 + AluSq SINE Alu 1 299 -14 776 200 0 0 chr2 152997244 152997374 -97690480 + FLAM_C SINE Alu 1 130 -3 206 314 43 122 chr2 152997400 152997588 -97690266 - L2 LINE L2 -111 3161 2989 21 36 0 0 chr2 152998000 152998028 -97689826 + AT_rich Low_complexity Low_complexity 1 28 0 429 109 0 0 chr2 152998569 152998633 -97689221 + (TG)n Simple_repeat Simple_repeat 1 64 0 466 317 100 0 chr2 152998932 152999112 -97688742 - MIR SINE MIR -14 248 51 2452 51 0 0 chr2 152999293 152999588 -97688266 + AluY SINE Alu 1 295 -16 1853 179 0 7 chr2 152999646 152999948 -97687906 - AluJb SINE Alu -12 300 1 5997 107 3 0 chr2 152999968 153001058 -97686796 - L1PB1 LINE L1 -3 6148 5064 726 158 0 60 chr2 153001125 153001258 -97686596 + FLAM_C SINE Alu 1 125 -18 2263 89 3 0 chr2 153001420 153001711 -97686143 + AluY SINE Alu 1 292 -19 2462 87 0 0 chr2 153001727 153002027 -97685827 + AluSq SINE Alu 3 302 -11 21 0 0 0 chr2 153002206 153002227 -97685627 + AT_rich Low_complexity Low_complexity 1 21 0 1527 174 66 12 chr2 153002233 153002491 -97685363 - AluJb SINE Alu -36 276 5 2222 105 0 0 chr2 153002671 153002965 -97684889 + AluY SINE Alu 1 294 -17 1922 121 45 17 chr2 153003058 153003347 -97684507 + AluSx SINE Alu 1 297 -15 1006 147 13 13 chr2 153003405 153003561 -97684293 + AluJb SINE Alu 137 292 -20 21 0 0 0 chr2 153004509 153004530 -97683324 + AT_rich Low_complexity Low_complexity 1 21 0 2204 101 0 17 chr2 153004620 153004918 -97682936 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr2 153004960 153004983 -97682871 + AT_rich Low_complexity Low_complexity 1 23 0 2111 123 0 23 chr2 153004988 153005288 -97682566 + AluJb SINE Alu 1 293 -19 299 325 74 48 chr2 153005570 153005801 -97682053 + L2 LINE L2 2740 2976 -338 318 343 79 7 chr2 153006106 153006246 -97681608 + MIR3 SINE MIR 36 185 -23 1854 123 60 27 chr2 153006730 153007064 -97680790 - THE1C LTR MaLR 0 375 31 306 281 103 74 chr2 153007606 153007809 -97680045 - L2 LINE L2 -1 3312 3104 572 239 3 31 chr2 153007812 153007976 -97679878 + L1ME1 LINE L1 6019 6334 0 1072 180 0 0 chr2 153007985 153008152 -97679702 + AluSg/x SINE Alu 130 296 -14 671 347 120 8 chr2 153008179 153008642 -97679212 - L2 LINE L2 -239 3074 2550 371 309 169 11 chr2 153008739 153009017 -97678837 - MLT1J2 LTR MaLR -127 323 2 231 228 101 0 chr2 153009026 153009105 -97678749 - L2 LINE L2 -782 2532 2446 190 308 19 0 chr2 153009131 153009183 -97678671 + L2 LINE L2 2440 2492 -822 331 151 35 29 chr2 153009744 153009976 -97677878 + AluJb SINE Alu 3 302 0 501 178 0 0 chr2 153010159 153010259 -97677595 - AluSg/x SINE Alu 0 308 209 2268 96 3 0 chr2 153010308 153010599 -97677255 + AluSq SINE Alu 1 292 -21 201 108 0 0 chr2 153010626 153010663 -97677191 + (T)n Simple_repeat Simple_repeat 1 37 0 210 122 41 41 chr2 153010693 153010742 -97677112 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 27 49 0 0 chr2 153010809 153010850 -97677004 + AT_rich Low_complexity Low_complexity 1 41 0 359 278 35 69 chr2 153010884 153011057 -97676797 - L1ME4a LINE L1 -11 6110 5944 1179 164 34 84 chr2 153011064 153011326 -97676528 - AluJo SINE Alu 0 312 64 665 236 0 0 chr2 153011570 153011693 -97676161 + FLAM_A SINE Alu 5 127 -6 615 287 50 10 chr2 153012131 153012490 -97675364 - MLT1I LTR MaLR -6 403 1 2198 101 20 0 chr2 153012640 153012936 -97674918 + AluSp SINE Alu 1 302 -11 22 0 0 0 chr2 153013341 153013363 -97674491 + AT_rich Low_complexity Low_complexity 1 22 0 1043 178 11 0 chr2 153013611 153013785 -97674069 - AluJo SINE Alu -17 295 120 2304 104 0 0 chr2 153014128 153014425 -97673429 - AluSg SINE Alu -13 297 1 720 90 449 0 chr2 153018350 153018415 -97669439 + MER30 DNA MER1_type 4 39 -191 2496 70 0 0 chr2 153018415 153018716 -97669138 - AluY SINE Alu -10 301 1 720 90 449 0 chr2 153018716 153018806 -97669048 + MER30 DNA MER1_type 39 229 -1 272 333 22 11 chr2 153018815 153018905 -97668949 + MIR3 SINE MIR 111 201 -7 1773 182 3 10 chr2 153019046 153019353 -97668501 + AluJb SINE Alu 5 309 -3 265 232 0 0 chr2 153019374 153019430 -97668424 - MIR SINE MIR -93 169 114 21 0 0 0 chr2 153019557 153019578 -97668276 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr2 153019768 153019813 -97668041 + AT_rich Low_complexity Low_complexity 1 45 0 911 96 89 38 chr2 153019881 153020038 -97667816 + L1PA13 LINE L1 5999 6163 0 23 0 0 0 chr2 153020054 153020077 -97667777 + AT_rich Low_complexity Low_complexity 1 23 0 2146 106 3 3 chr2 153020087 153020404 -97667450 - AluSx SINE Alu 0 317 1 2652 48 7 0 chr2 153021509 153021818 -97666036 - AluY SINE Alu 0 311 1 2164 110 33 7 chr2 153022062 153022363 -97665491 + AluSx SINE Alu 1 309 -3 2323 68 7 16 chr2 153022404 153022711 -97665143 + AluY SINE Alu 1 304 -7 1677 164 62 7 chr2 153024108 153024383 -97663471 + AluJo SINE Alu 5 294 -18 2124 128 0 0 chr2 153024385 153024673 -97663181 + AluSx SINE Alu 1 288 -24 413 288 73 34 chr2 153025366 153025571 -97662283 - MIR SINE MIR -2 260 48 27 29 0 0 chr2 153026142 153026176 -97661678 + AT_rich Low_complexity Low_complexity 1 34 0 1909 156 17 7 chr2 153027939 153028240 -97659614 + AluSx SINE Alu 1 304 -8 31 76 0 0 chr2 153028282 153028348 -97659506 + AT_rich Low_complexity Low_complexity 1 66 0 732 201 0 8 chr2 153028348 153028482 -97659372 - FLAM_A SINE Alu 0 133 1 1750 190 3 7 chr2 153028520 153028825 -97659029 + AluJo SINE Alu 1 304 -8 2365 88 0 3 chr2 153029816 153030112 -97657742 + AluSx SINE Alu 1 295 -17 2408 97 3 0 chr2 153030614 153030923 -97656931 - AluSx SINE Alu -2 310 1 1602 194 14 0 chr2 153031040 153031329 -97656525 + 7SLRNA srpRNA srpRNA 21 313 -7 25 23 0 23 chr2 153031635 153031666 -97656188 + AT_rich Low_complexity Low_complexity 1 32 -10 2152 137 0 0 chr2 153031666 153031965 -97655889 + AluSx SINE Alu 1 299 -13 25 23 0 23 chr2 153031965 153031976 -97655878 + AT_rich Low_complexity Low_complexity 32 42 0 2134 108 11 0 chr2 153032064 153032367 -97655487 + AluSx SINE Alu 1 306 0 21 0 0 0 chr2 153032773 153032794 -97655060 + AT_rich Low_complexity Low_complexity 1 21 0 539 245 7 7 chr2 153033108 153033255 -97654599 + MER103 DNA DNA 2 148 -18 2417 79 3 0 chr2 153033872 153034175 -97653679 + AluSp SINE Alu 1 304 -9 2216 102 0 7 chr2 153034455 153034750 -97653104 + AluSc SINE Alu 1 293 -16 1821 140 12 64 chr2 153034859 153034992 -97652862 + AluJb SINE Alu 1 139 -173 1986 148 3 3 chr2 153034992 153035282 -97652572 + AluSx SINE Alu 1 290 -22 1821 140 12 64 chr2 153035282 153035476 -97652378 + AluJb SINE Alu 139 311 -1 248 302 0 52 chr2 153035637 153035733 -97652121 - L1MC/D LINE L1 -1949 5859 5769 1524 148 164 19 chr2 153035903 153036166 -97651688 - AluJo SINE Alu 0 302 2 2395 57 0 0 chr2 153036182 153036497 -97651357 - AluY SINE Alu 0 315 1 261 0 0 0 chr2 153036504 153036533 -97651321 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 316 256 124 31 chr2 153036663 153036792 -97651062 - L1MC/D LINE L1 -2413 5395 5255 21 0 0 0 chr2 153036821 153036842 -97651012 + AT_rich Low_complexity Low_complexity 1 21 0 833 183 26 42 chr2 153036883 153037074 -97650780 + MIR SINE MIR 21 208 -54 792 182 0 0 chr2 153037121 153037242 -97650612 + FLAM_C SINE Alu 15 135 -8 2318 83 3 3 chr2 153037517 153037817 -97650037 - AluSp SINE Alu -13 300 1 2150 88 0 20 chr2 153037853 153038149 -97649705 + AluSx SINE Alu 10 299 -13 1258 268 61 18 chr2 153038654 153039143 -97648711 - L1ME4a LINE L1 0 6121 5612 228 242 136 23 chr2 153039163 153039295 -97648559 - L1ME4a LINE L1 -2348 5460 5314 1589 121 25 16 chr2 153039495 153039934 -97647920 - LTR54 LTR ERV1 0 510 3 3323 122 152 35 chr2 153040050 153040220 -97647634 + MER39 LTR ERV1 1 150 -557 1856 135 3 55 chr2 153040220 153040531 -97647323 + AluJo SINE Alu 3 297 -15 3323 122 152 35 chr2 153040531 153040991 -97646863 + MER39 LTR ERV1 150 705 -2 2178 94 7 3 chr2 153041040 153041337 -97646517 + AluSx SINE Alu 1 298 -14 447 210 14 87 chr2 153041339 153041477 -97646377 - L2 LINE L2 -37 3276 3149 285 278 71 76 chr2 153041518 153041716 -97646138 - L2 LINE L2 -1407 1907 1711 642 272 65 4 chr2 153041959 153042191 -97645663 - LTR33 LTR ERVL -275 246 1 371 257 0 0 chr2 153042191 153042265 -97645589 - L2 LINE L2 -1734 1580 1507 1389 212 82 74 chr2 153042266 153042426 -97645428 - Charlie4a DNA MER1_type -1454 507 350 1159 157 0 17 chr2 153042426 153042604 -97645250 + FAM SINE Alu 1 175 0 1389 212 82 74 chr2 153042604 153042688 -97645166 - Charlie4a DNA MER1_type -1611 350 268 1710 162 32 21 chr2 153042688 153042972 -97644882 + AluJb SINE Alu 1 287 -25 1389 212 82 74 chr2 153042972 153043212 -97644642 - Charlie4a DNA MER1_type -1693 268 18 1797 225 49 87 chr2 153043216 153043718 -97644136 - L2 LINE L2 -1814 1500 1029 2015 146 0 3 chr2 153043718 153044012 -97643842 - AluSx SINE Alu -19 293 1 1797 225 49 87 chr2 153044012 153044185 -97643669 - L2 LINE L2 -2285 1029 851 2517 180 29 41 chr2 153044195 153044642 -97643212 + MLT1D LTR MaLR 1 444 -61 2275 95 0 0 chr2 153044642 153044948 -97642906 + AluSx SINE Alu 1 306 0 2517 180 29 41 chr2 153044948 153045010 -97642844 + MLT1D LTR MaLR 444 505 0 236 191 0 0 chr2 153045372 153045419 -97642435 - Alu SINE Alu -1 298 252 2599 52 0 0 chr2 153045498 153045803 -97642051 + AluY SINE Alu 7 311 0 2258 105 0 3 chr2 153046077 153046373 -97641481 - AluSx SINE Alu -17 295 1 2046 133 3 7 chr2 153046395 153046697 -97641157 - AluJb SINE Alu -11 301 1 743 247 51 79 chr2 153047728 153048142 -97639712 + L2 LINE L2 2750 3156 -157 189 0 0 0 chr2 153048151 153048172 -97639682 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 291 28 0 0 chr2 153048181 153048217 -97639637 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1901 115 0 4 chr2 153048219 153048480 -97639374 - AluSq SINE Alu -53 260 1 774 167 8 16 chr2 153048482 153048608 -97639246 - FLAM_A SINE Alu -8 134 10 1355 193 180 98 chr2 153048687 153048768 -97639086 - LTR41 LTR ERVL 0 795 722 2192 103 0 14 chr2 153048768 153049059 -97638795 + AluSg SINE Alu 1 287 -23 1355 193 180 98 chr2 153049059 153049551 -97638303 - LTR41 LTR ERVL -73 722 129 2343 88 30 7 chr2 153049551 153049856 -97637998 - AluSx SINE Alu 0 312 1 1355 193 180 98 chr2 153049856 153049975 -97637879 - LTR41 LTR ERVL -666 129 21 1344 117 81 14 chr2 153050938 153051161 -97636693 + Tigger7 DNA MER2_type 2254 2491 0 1073 81 0 7 chr2 153051311 153051447 -97636407 - AluSq/x SINE Alu -177 135 1 2809 193 25 32 chr2 153051454 153052020 -97635834 - MER68 LTR ERV1 0 562 1 1957 129 14 3 chr2 153052257 153052551 -97635303 + AluSx SINE Alu 1 297 -15 2382 91 3 10 chr2 153052703 153053010 -97634844 - AluSg SINE Alu -5 305 1 28 29 0 0 chr2 153053207 153053242 -97634612 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr2 153053341 153053371 -97634483 + AT_rich Low_complexity Low_complexity 1 30 0 1394 152 5 5 chr2 153053666 153053913 -97633941 + L1MB7 LINE L1 5725 5971 -213 2097 130 10 3 chr2 153053913 153054220 -97633634 + AluSx SINE Alu 1 309 -3 2958 142 38 11 chr2 153054630 153055102 -97632752 - LTR45B LTR ERV1 0 489 5 1961 151 3 7 chr2 153055480 153055779 -97632075 + AluSx SINE Alu 6 303 -9 1708 184 274 53 chr2 153055849 153056647 -97631207 - L1MC4 LINE L1 -231 7811 6800 723 267 118 13 chr2 153056643 153056958 -97630896 - L1MC4 LINE L1 -1916 5892 5545 * 2405 100 3 0 chr2 153056959 153057269 -97630585 - AluSx SINE Alu -1 311 1 783 193 0 22 chr2 153057513 153057648 -97630206 - FLAM_A SINE Alu -1 132 1 2295 102 0 0 chr2 153058166 153058460 -97629394 + AluSx SINE Alu 3 296 -16 818 108 0 0 chr2 153058463 153058565 -97629289 - AluJo/FLAM SINE Alu -195 117 16 2248 117 0 0 chr2 153058616 153058925 -97628929 - AluSg SINE Alu -1 309 1 761 219 66 74 chr2 153059003 153059259 -97628595 - MIR SINE MIR -3 259 6 252 0 0 0 chr2 153059411 153059439 -97628415 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1891 124 4 18 chr2 153059444 153059718 -97628136 - AluSx SINE Alu -37 275 6 1968 148 6 13 chr2 153059734 153059908 -97627946 - AluSx SINE Alu -3 309 136 2243 107 3 13 chr2 153059908 153060216 -97627638 - AluSx SINE Alu -6 306 2 1968 148 6 13 chr2 153060216 153060352 -97627502 - AluSx SINE Alu -176 136 1 261 0 0 0 chr2 153060508 153060537 -97627317 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2129 110 0 24 chr2 153060539 153060831 -97627023 - AluSx SINE Alu -27 285 1 264 40 60 0 chr2 153061037 153061087 -97626767 + T-rich Low_complexity Low_complexity 2 54 0 1889 142 0 3 chr2 153061089 153061371 -97626483 - AluSx SINE Alu -31 281 1 2200 108 7 0 chr2 153061683 153061979 -97625875 + AluSg SINE Alu 1 298 -12 5451 139 30 38 chr2 153061985 153062356 -97625498 - L1MA7 LINE L1 0 6291 5919 2083 147 0 0 chr2 153062356 153062655 -97625199 - AluSx SINE Alu -13 299 1 5451 139 30 38 chr2 153062655 153063597 -97624257 - L1MA7 LINE L1 -372 5919 4993 2457 81 0 0 chr2 153063597 153063895 -97623959 - AluSg SINE Alu -12 298 1 5451 139 30 38 chr2 153063895 153063914 -97623940 - L1MA7 LINE L1 -1298 4993 4975 292 281 0 0 chr2 153063987 153064051 -97623803 - L2 LINE L2 0 3313 3250 200 309 135 24 chr2 153064451 153064542 -97623312 + MIR SINE MIR 109 219 -43 1805 169 3 10 chr2 153064542 153064844 -97623010 + AluSx SINE Alu 1 300 -12 200 309 135 24 chr2 153064844 153064878 -97622976 + MIR SINE MIR 219 248 -14 1882 158 7 0 chr2 153065086 153065395 -97622459 + AluJo SINE Alu 1 311 0 2017 109 33 0 chr2 153066042 153066317 -97621537 - AluSx SINE Alu -18 294 11 203 281 101 43 chr2 153066434 153066573 -97621281 - L2 LINE L2 -452 2862 2716 768 208 0 8 chr2 153066595 153066725 -97621129 + FRAM SINE Alu 32 160 -16 227 286 0 18 chr2 153066824 153066880 -97620974 - L2 LINE L2 -76 3237 3183 2348 78 7 3 chr2 153066886 153067192 -97620662 + AluSg SINE Alu 4 310 0 594 157 0 0 chr2 153067193 153067314 -97620540 + (TA)n Simple_repeat Simple_repeat 1 121 0 2338 72 0 0 chr2 153067566 153067858 -97619996 + AluSg1 SINE Alu 1 292 -17 429 275 7 47 chr2 153067963 153068112 -97619742 + MER5A DNA MER1_type 47 189 0 328 186 71 0 chr2 153068138 153068208 -97619646 - MIR SINE MIR -107 155 81 2117 69 38 66 chr2 153068256 153068576 -97619278 - AluSx SINE Alu -1 311 1 207 88 0 0 chr2 153068801 153068835 -97619019 + (GGGAA)n Simple_repeat Simple_repeat 1 34 0 2164 104 6 19 chr2 153070412 153070729 -97617125 - AluSp SINE Alu 0 313 1 182 337 82 0 chr2 153070836 153070934 -97616920 - MIR SINE MIR -37 225 120 724 186 0 57 chr2 153071373 153071513 -97616341 - FLAM_A SINE Alu -1 132 1 2053 121 21 3 chr2 153071521 153071811 -97616043 - AluSx SINE Alu -17 295 1 1728 103 110 22 chr2 153072078 153072350 -97615504 - AluSp SINE Alu -17 296 1 1940 78 103 7 chr2 153073058 153073329 -97614525 + AluSq SINE Alu 1 297 -16 189 0 0 0 chr2 153073703 153073724 -97614130 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 2366 88 3 0 chr2 153074094 153074389 -97613465 + AluY SINE Alu 1 296 -15 983 74 201 0 chr2 153074465 153074614 -97613240 + AluY SINE Alu 125 303 -8 2249 83 10 10 chr2 153074621 153074911 -97612943 + AluSp SINE Alu 2 291 -22 1780 114 114 19 chr2 153076532 153076765 -97611089 - MER2 DNA MER2_type 0 345 136 5643 150 55 84 chr2 153076765 153077242 -97610612 - Tigger3b DNA MER2_type -1797 1231 741 1774 176 7 0 chr2 153077242 153077531 -97610323 - AluSx SINE Alu -19 293 3 5643 150 55 84 chr2 153077531 153077633 -97610221 - Tigger3b DNA MER2_type -2287 741 637 2094 109 3 3 chr2 153077633 153077917 -97609937 + AluSx SINE Alu 13 296 -16 5643 150 55 84 chr2 153077917 153078344 -97609510 - Tigger3b DNA MER2_type -2391 637 267 2346 110 0 0 chr2 153078344 153078652 -97609202 - AluSc SINE Alu -1 308 1 5643 150 55 84 chr2 153078652 153078910 -97608944 - Tigger3b DNA MER2_type -2761 267 3 1780 114 114 19 chr2 153078910 153078991 -97608863 - MER2 DNA MER2_type -209 136 1 1880 157 17 3 chr2 153079485 153079784 -97608070 + AluJo SINE Alu 1 303 -9 701 275 181 32 chr2 153080135 153080607 -97607247 - L2 LINE L2 -17 3296 2735 910 160 0 0 chr2 153080607 153080738 -97607116 - FLAM_C SINE Alu -2 131 1 2140 99 24 0 chr2 153080866 153081158 -97606696 - AluSq SINE Alu -14 299 1 2007 112 6 55 chr2 153081533 153081845 -97606009 - AluSx SINE Alu -15 297 1 2465 206 71 32 chr2 153082193 153082781 -97605073 - MER82 DNA MER2_type -42 611 1 2749 162 74 38 chr2 153082828 153083132 -97604722 - L1MB4 LINE L1 -2 6178 5886 2132 118 0 7 chr2 153083132 153083428 -97604426 - AluSc SINE Alu -13 296 3 2749 162 74 38 chr2 153083428 153083704 -97604150 - L1MB4 LINE L1 -294 5886 5577 1174 141 69 110 chr2 153083705 153083995 -97603859 - AluJb SINE Alu -23 289 12 2252 227 60 26 chr2 153084008 153084692 -97603162 - L1MB4 LINE L1 -595 5585 4926 2167 108 0 38 chr2 153084692 153085007 -97602847 - AluSx SINE Alu -9 303 1 2252 227 60 26 chr2 153085007 153085197 -97602657 - L1MB4 LINE L1 -1254 4926 4744 2289 95 0 3 chr2 153085197 153085502 -97602352 - AluSg SINE Alu -6 304 1 2252 227 60 26 chr2 153085502 153085688 -97602166 - L1MB4 LINE L1 -1436 4744 4490 1971 122 56 0 chr2 153085688 153085975 -97601879 - AluSx SINE Alu -9 303 1 2252 227 60 26 chr2 153085975 153086079 -97601775 - L1MB4 LINE L1 -1690 4490 4391 2301 107 7 0 chr2 153086230 153086539 -97601315 - AluSp SINE Alu -2 311 1 207 88 0 0 chr2 153086541 153086575 -97601279 + (T)n Simple_repeat Simple_repeat 1 34 0 1842 136 0 49 chr2 153086669 153086812 -97601042 + AluSx SINE Alu 3 126 -186 1916 107 37 0 chr2 153086812 153087107 -97600747 + AluSx SINE Alu 1 305 0 1842 136 0 49 chr2 153087107 153087270 -97600584 + AluSx SINE Alu 126 295 -17 2164 99 20 0 chr2 153088206 153088508 -97599346 - AluSq SINE Alu -5 308 1 344 254 225 14 chr2 153088519 153088661 -97599193 - MIR SINE MIR -24 238 67 2342 81 0 3 chr2 153089053 153089349 -97598505 - AluY SINE Alu -16 295 1 2229 114 0 0 chr2 153089349 153089648 -97598206 - AluSg SINE Alu -11 299 1 1708 144 42 4 chr2 153089715 153089978 -97597876 - AluJb SINE Alu -35 277 5 260 337 34 0 chr2 153090150 153090239 -97597615 - MLT1J LTR MaLR -94 417 326 1862 98 58 11 chr2 153090542 153090808 -97597046 + AluSp SINE Alu 3 284 -29 324 0 0 0 chr2 153090808 153090844 -97597010 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr2 153091033 153091054 -97596800 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1862 146 4 7 chr2 153091057 153091338 -97596516 - AluSx SINE Alu -32 280 1 472 215 60 54 chr2 153091698 153091847 -97596007 - MER20 DNA MER1_type -24 195 46 24 67 0 0 chr2 153091862 153091907 -97595947 + AT_rich Low_complexity Low_complexity 1 45 0 29 0 0 0 chr2 153091979 153092008 -97595846 + AT_rich Low_complexity Low_complexity 1 29 0 1909 131 7 7 chr2 153092470 153092783 -97595071 - AluSx SINE Alu 0 313 1 2073 123 17 3 chr2 153092918 153093219 -97594635 + AluSx SINE Alu 1 305 -7 2548 61 0 0 chr2 153093466 153093763 -97594091 - AluY SINE Alu -9 302 6 24 0 0 0 chr2 153093885 153093909 -97593945 + AT_rich Low_complexity Low_complexity 1 24 0 25 51 0 0 chr2 153093977 153094016 -97593838 + AT_rich Low_complexity Low_complexity 1 39 0 2156 104 0 7 chr2 153094970 153095278 -97592576 + AluSx SINE Alu 1 306 -6 1579 199 13 13 chr2 153095287 153095589 -97592265 + AluJo SINE Alu 1 302 -10 1879 160 7 0 chr2 153096437 153096730 -97591124 + AluJb SINE Alu 1 295 -17 429 306 158 9 chr2 153096741 153096963 -97590891 - MIR SINE MIR -3 259 5 1340 210 24 14 chr2 153097224 153097514 -97590340 + AluJo SINE Alu 1 293 -19 21 0 0 0 chr2 153097861 153097882 -97589972 + AT_rich Low_complexity Low_complexity 1 21 0 1704 186 103 18 chr2 153097922 153098321 -97589533 - Tigger2a DNA MER2_type -1 433 1 2306 80 10 17 chr2 153098411 153098713 -97589141 + AluSp SINE Alu 1 300 -13 2022 141 37 0 chr2 153098730 153099027 -97588827 + AluSx SINE Alu 1 308 -4 534 255 158 16 chr2 153099710 153099894 -97587960 + MIR SINE MIR 2 211 -51 376 146 0 0 chr2 153100035 153100090 -97587764 + AluS SINE Alu 3 57 -246 957 180 23 0 chr2 153100090 153100262 -97587592 + AluJb SINE Alu 122 297 -15 258 250 10 40 chr2 153100376 153100476 -97587378 + L1MC/D LINE L1 5695 5791 -2017 2098 96 11 0 chr2 153101077 153101400 -97586454 - AluSp SINE Alu 0 327 2 25 0 0 0 chr2 153101409 153101434 -97586420 + AT_rich Low_complexity Low_complexity 1 25 0 2161 88 7 16 chr2 153101796 153102104 -97585750 - AluY SINE Alu -6 305 1 1878 154 41 0 chr2 153103334 153103626 -97584228 - AluSx SINE Alu -8 304 1 1631 210 66 25 chr2 153103845 153104284 -97583570 - MLT1C LTR MaLR -5 462 6 1955 139 36 3 chr2 153104565 153104867 -97582987 - AluSx SINE Alu 0 312 1 2085 92 39 3 chr2 153105043 153105327 -97582527 - AluSq SINE Alu -19 294 1 2742 19 0 0 chr2 153105963 153106271 -97581583 - AluY SINE Alu -3 308 1 2078 124 17 0 chr2 153106571 153106869 -97580985 - AluSx SINE Alu -9 303 1 1810 134 33 39 chr2 153107065 153107372 -97580482 - AluSx SINE Alu -7 305 1 246 318 112 9 chr2 153107545 153107652 -97580202 + L2 LINE L2 2685 2802 -512 188 207 95 86 chr2 153107693 153107809 -97580045 + L2 LINE L2 3113 3229 -84 229 241 123 77 chr2 153107908 153108103 -97579751 - L1M4 LINE L1 -1455 4691 4488 795 183 52 0 chr2 153108468 153108621 -97579233 - FAM SINE Alu -1 48 1 2316 74 7 3 chr2 153108873 153109170 -97578684 - AluSq SINE Alu -15 298 1 2180 95 14 0 chr2 153109616 153109912 -97577942 - AluSx SINE Alu -12 300 1 1265 172 84 76 chr2 153110149 153110492 -97577362 + MER7A DNA MER2_type 3 346 0 273 278 28 83 chr2 153112082 153112262 -97575592 - L1MC4 LINE L1 -8 8034 7865 633 195 188 55 chr2 153112269 153112323 -97575531 - L1MC4 LINE L1 -430 7612 7567 2199 110 0 10 chr2 153112323 153112631 -97575223 + AluSx SINE Alu 1 305 -7 633 195 188 55 chr2 153112631 153112832 -97575022 - L1MC4 LINE L1 -475 7567 7323 391 273 14 7 chr2 153112881 153113020 -97574834 - L1MC4 LINE L1 -1453 6589 6450 907 139 40 104 chr2 153114530 153114839 -97573015 - MER2 DNA MER2_type 0 345 7 1959 153 0 3 chr2 153115756 153116056 -97571798 - AluSq SINE Alu -8 305 7 1656 183 28 3 chr2 153116167 153116451 -97571403 - AluJb SINE Alu -21 291 1 2324 98 0 0 chr2 153117255 153117560 -97570294 - AluY SINE Alu -6 305 1 2434 70 0 3 chr2 153120420 153120720 -97567134 - AluY SINE Alu -12 299 1 1974 158 3 0 chr2 153120891 153121201 -97566653 - AluJb SINE Alu -1 311 1 25 51 0 0 chr2 153121398 153121437 -97566417 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 153121585 153121607 -97566247 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr2 153121677 153121697 -97566157 + (TG)n Simple_repeat Simple_repeat 2 21 0 2050 103 17 20 chr2 153125969 153126269 -97561585 + AluSx SINE Alu 1 299 -13 2080 134 0 7 chr2 153126363 153126670 -97561184 - AluSg SINE Alu -4 306 2 277 312 149 14 chr2 153127987 153128128 -97559726 - MIR SINE MIR -31 231 72 22 35 0 0 chr2 153128690 153128719 -97559135 + AT_rich Low_complexity Low_complexity 1 29 0 964 155 67 80 chr2 153129415 153129654 -97558200 - MER46A DNA MER2_type 0 236 1 1244 203 79 20 chr2 153129931 153130275 -97557579 - L1MB8 LINE L1 0 6178 5801 * 14342 46 0 0 chr2 153130272 153132046 -97555808 - L1P LINE L1 -867 5279 3506 1044 134 88 0 chr2 153132033 153132227 -97555627 - L1MB8 LINE L1 -365 5819 5609 * 1674 129 66 11 chr2 153132321 153132608 -97555246 - AluSx SINE Alu -9 303 1 25 31 0 0 chr2 153132622 153132654 -97555200 + AT_rich Low_complexity Low_complexity 1 32 0 1881 150 11 0 chr2 153133425 153133705 -97554149 + AluSx SINE Alu 1 283 -29 2290 83 14 0 chr2 153136448 153136738 -97551116 - AluY SINE Alu -17 294 1 2190 111 3 3 chr2 153136739 153137037 -97550817 - AluSq SINE Alu -15 298 1 1375 192 53 0 chr2 153137274 153137519 -97550335 + AluSx SINE Alu 42 299 -13 291 253 69 0 chr2 153138067 153138154 -97549700 - MER5A DNA MER1_type -83 106 14 1071 191 112 7 chr2 153139920 153140197 -97547657 + MER58B DNA MER1_type 35 340 -1 1297 101 19 14 chr2 153140782 153140989 -97546865 + MER1B DNA MER1_type 132 339 0 1728 152 126 42 chr2 153141741 153142169 -97545685 - MLT1C LTR MaLR 0 467 4 263 188 175 0 chr2 153142495 153142575 -97545279 + L1MC5 LINE L1 7808 7901 -60 1506 157 65 44 chr2 153142576 153142706 -97545148 + MER2 DNA MER2_type 1 127 -218 1637 136 136 3 chr2 153142706 153143000 -97544854 + MER1B DNA MER1_type 1 333 -4 1506 157 65 44 chr2 153143000 153143207 -97544647 + MER2 DNA MER2_type 127 345 0 2029 136 0 0 chr2 153143342 153143636 -97544218 + AluSx SINE Alu 1 294 -18 260 333 52 0 chr2 153143806 153143902 -97543952 + L2 LINE L2 3137 3237 -35 22 56 0 0 chr2 153144252 153144288 -97543566 + AT_rich Low_complexity Low_complexity 1 36 0 2985 186 63 71 chr2 153145088 153146041 -97541813 + L1MB7 LINE L1 5184 6127 -57 195 129 0 0 chr2 153146074 153146105 -97541749 + (TG)n Simple_repeat Simple_repeat 2 32 0 263 295 68 19 chr2 153146463 153146670 -97541184 - L1MC4a LINE L1 -1869 5939 5723 21 36 0 0 chr2 153146795 153146823 -97541031 + AT_rich Low_complexity Low_complexity 1 28 0 652 188 54 0 chr2 153146827 153146939 -97540915 - FLAM_C SINE Alu -25 118 1 336 295 77 27 chr2 153147084 153147267 -97540587 - L1MC4a LINE L1 -745 5401 5210 1569 185 24 20 chr2 153147393 153147690 -97540164 + AluJo SINE Alu 1 298 -14 470 299 132 43 chr2 153147761 153148295 -97539559 - L1MC4a LINE L1 -1170 4976 4378 1769 190 7 0 chr2 153148440 153148724 -97539130 - AluJo SINE Alu -25 287 2 335 285 160 50 chr2 153149598 153149798 -97538056 - MIR SINE MIR 0 262 41 213 323 48 0 chr2 153149883 153149945 -97537909 + L2 LINE L2 3027 3091 -181 1102 208 19 9 chr2 153150066 153150278 -97537576 - AluJb SINE Alu -15 297 84 2188 84 0 14 chr2 153153658 153153976 -97533878 - AluSg SINE Alu 0 314 1 759 198 55 22 chr2 153154321 153154503 -97533351 + MER5A DNA MER1_type 2 189 0 200 176 15 59 chr2 153154673 153154741 -97533113 + A-rich Low_complexity Low_complexity 2 66 0 23 20 0 61 chr2 153158276 153158325 -97529529 + AT_rich Low_complexity Low_complexity 1 46 0 2056 147 0 10 chr2 153159614 153159927 -97527927 - AluJb SINE Alu -2 310 1 1849 129 16 13 chr2 153161094 153161405 -97526449 + L1PB1 LINE L1 5840 6151 0 22 0 0 0 chr2 153161765 153161787 -97526067 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 153165707 153165729 -97522125 + AT_rich Low_complexity Low_complexity 1 22 0 236 240 83 49 chr2 153166353 153166460 -97521394 + LTR48B LTR ERV1 1 131 -411 1010 204 164 20 chr2 153166465 153166813 -97521041 + MER39 LTR ERV1 305 702 -5 22 56 0 0 chr2 153168400 153168436 -97519418 + AT_rich Low_complexity Low_complexity 1 36 0 4666 75 44 14 chr2 153168559 153168643 -97519211 - PABL_A LTR ERV1 0 660 580 1897 130 61 7 chr2 153168643 153168936 -97518918 - AluSc SINE Alu 0 309 1 4666 75 44 14 chr2 153168936 153169492 -97518362 - PABL_A LTR ERV1 -80 580 1 2117 97 26 35 chr2 153169512 153169854 -97518000 + MER44D DNA MER2_type 1 609 0 200 270 137 45 chr2 153170451 153170609 -97517245 + MER5A DNA MER1_type 4 171 -13 2484 70 0 13 chr2 153171048 153171362 -97516492 - AluY SINE Alu -1 310 1 1539 183 65 0 chr2 153171362 153171640 -97516214 - AluJb SINE Alu -13 299 3 754 154 8 0 chr2 153174418 153174535 -97513319 - FLAM_A SINE Alu -19 123 6 282 279 0 12 chr2 153174706 153174792 -97513062 - L1MD3 LINE L1 -10 7985 7901 1824 133 16 107 chr2 153176541 153176923 -97510931 - Tigger3(Golem) DNA MER2_type -2 3027 1 185 262 48 0 chr2 153176980 153177022 -97510832 + L2 LINE L2 2715 2758 -556 2309 171 29 2 chr2 153178222 153178673 -97509181 + L1MB4 LINE L1 5712 6174 -6 406 156 44 44 chr2 153178897 153178987 -97508867 + MER94 DNA DNA 1 90 -44 245 222 19 0 chr2 153179509 153179563 -97508291 + L2 LINE L2 3217 3271 -1 1997 141 3 0 chr2 153179611 153179902 -97507952 + AluJb SINE Alu 1 292 -20 294 204 97 10 chr2 153180678 153180781 -97507073 + HAL1b LINE L1 986 1097 -251 24 91 0 0 chr2 153182260 153182326 -97505528 + AT_rich Low_complexity Low_complexity 1 66 0 2371 109 0 3 chr2 153183683 153183994 -97503860 - AluSg SINE Alu 0 310 1 214 260 78 26 chr2 153185549 153185626 -97502228 - MIR SINE MIR -72 190 110 510 250 40 80 chr2 153186965 153187189 -97500665 - MIR SINE MIR -17 245 31 309 208 0 14 chr2 153187337 153187409 -97500445 - L1ME2 LINE L1 -1 6163 6093 478 178 93 0 chr2 153187420 153187527 -97500327 - L1MC4 LINE L1 -1 8041 7925 2110 108 14 3 chr2 153188563 153188858 -97498996 - AluSx SINE Alu -14 298 1 304 325 158 48 chr2 153188985 153189194 -97498660 + L2 LINE L2 3040 3271 -1 754 213 165 17 chr2 153189664 153189955 -97497899 + MLT1G1 LTR MaLR 262 595 0 2212 147 0 0 chr2 153190333 153190645 -97497209 - AluSx SINE Alu 0 312 1 548 243 37 0 chr2 153190648 153190784 -97497070 - MER20B DNA MER1_type -609 174 34 922 135 0 0 chr2 153191121 153191254 -97496600 - AluSg/x SINE Alu -8 304 172 210 298 24 0 chr2 153191282 153191366 -97496488 - MIR SINE MIR -86 122 37 1727 171 7 3 chr2 153194942 153195235 -97492619 - AluJb SINE Alu -18 294 1 24 32 0 0 chr2 153195408 153195439 -97492415 + AT_rich Low_complexity Low_complexity 1 31 0 318 230 112 62 chr2 153195566 153195727 -97492127 + MER58C DNA MER1_type 46 214 -1 188 323 32 0 chr2 153195760 153195822 -97492032 - MIR SINE MIR -62 146 83 24 53 0 0 chr2 153196367 153196405 -97491449 + AT_rich Low_complexity Low_complexity 1 38 0 805 192 70 52 chr2 153197409 153197638 -97490216 + L1MC3 LINE L1 7546 7778 -7 320 381 101 9 chr2 153198861 153199079 -97488775 - MIR SINE MIR -6 256 19 218 222 19 0 chr2 153199948 153200002 -97487852 + (TTTG)n Simple_repeat Simple_repeat 4 58 0 502 351 167 32 chr2 153200633 153202049 -97485805 + L2 LINE L2 1372 2977 -337 431 314 85 7 chr2 153202497 153202650 -97485204 - MIR3 SINE MIR -1 207 43 24 32 0 0 chr2 153202655 153202686 -97485168 + AT_rich Low_complexity Low_complexity 1 31 0 790 198 0 0 chr2 153202693 153202814 -97485040 - FLAM_A SINE Alu -12 121 1 219 274 168 11 chr2 153203058 153203153 -97484701 + MER5A DNA MER1_type 56 165 -24 286 261 78 100 chr2 153203396 153203576 -97484278 - MER5B DNA MER1_type 0 178 3 2391 89 3 0 chr2 153204322 153204625 -97483229 + AluSp SINE Alu 1 304 -9 2463 83 0 0 chr2 153205586 153205887 -97481967 - AluSq SINE Alu -12 301 1 2001 164 7 0 chr2 153209014 153209319 -97478535 + AluJo SINE Alu 1 307 -5 1735 164 7 30 chr2 153209668 153209973 -97477881 - AluJb SINE Alu -14 298 1 2205 105 0 3 chr2 153209976 153210297 -97477557 - AluSq SINE Alu 0 320 1 279 297 35 41 chr2 153211225 153211370 -97476484 - MIR SINE MIR -100 162 19 1660 177 13 7 chr2 153213307 153213606 -97474248 + AluJo SINE Alu 1 301 -11 1508 108 159 16 chr2 153213701 153213952 -97473902 + MER7A DNA MER2_type 62 346 0 249 297 59 10 chr2 153214195 153214296 -97473558 + MIR SINE MIR 107 212 -50 540 224 66 101 chr2 153215250 153215478 -97472376 - MER112 DNA MER1_type -33 227 8 7761 69 126 1 chr2 153215605 153218982 -97468872 + L1PA7 LINE L1 2353 6153 -1 640 13 0 0 chr2 153220629 153220705 -97467149 - L1PA3 LINE L1 0 6155 6080 30 77 0 0 chr2 153221951 153222016 -97465838 + AT_rich Low_complexity Low_complexity 1 65 0 2125 139 3 0 chr2 153222040 153222342 -97465512 - AluSx SINE Alu -9 303 1 263 0 81 0 chr2 153223154 153223191 -97464663 + T-rich Low_complexity Low_complexity 2 41 0 2085 126 7 0 chr2 153223195 153223481 -97464373 - AluSx SINE Alu -24 288 1 208 335 151 28 chr2 153223722 153223901 -97463953 + L2 LINE L2 3069 3269 -3 21 57 0 0 chr2 153224198 153224233 -97463621 + AT_rich Low_complexity Low_complexity 1 35 0 206 83 83 42 chr2 153226721 153226769 -97461085 + A-rich Low_complexity Low_complexity 1 50 0 559 317 72 28 chr2 153228522 153228812 -97459042 - MER102b DNA MER1_type -26 315 13 1158 98 15 74 chr2 153229876 153230036 -97457818 - L1MA3 LINE L1 -2 6303 6156 2075 75 4 4 chr2 153230036 153230302 -97457552 - AluSp SINE Alu -15 298 33 1158 98 15 74 chr2 153230302 153230344 -97457510 - L1MA3 LINE L1 -149 6156 6113 2214 127 0 0 chr2 153231068 153231368 -97456486 + AluSx SINE Alu 1 300 -12 306 125 38 0 chr2 153231501 153231581 -97456273 + (TA)n Simple_repeat Simple_repeat 2 84 0 2069 112 10 17 chr2 153231582 153231878 -97455976 - AluSx SINE Alu -18 294 1 25 31 0 0 chr2 153231885 153231917 -97455937 + AT_rich Low_complexity Low_complexity 1 32 0 274 374 20 7 chr2 153231919 153232066 -97455788 + MIR SINE MIR 47 195 -67 415 253 98 108 chr2 153232883 153232995 -97454859 - L1M4 LINE L1 -1880 4266 4154 2418 78 0 3 chr2 153232995 153233301 -97454553 - AluY SINE Alu -5 306 2 415 253 98 108 chr2 153233301 153233717 -97454137 - L1M4 LINE L1 -1992 4154 3743 1721 166 0 28 chr2 153233751 153234068 -97453786 - AluJo SINE Alu 0 309 1 28 61 0 0 chr2 153235062 153235111 -97452743 + AT_rich Low_complexity Low_complexity 1 49 0 365 80 53 0 chr2 153235471 153235546 -97452308 + (TA)n Simple_repeat Simple_repeat 2 80 0 2251 126 0 10 chr2 153235553 153235863 -97451991 - AluSx SINE Alu -5 307 1 427 293 86 86 chr2 153236123 153236611 -97451243 + L2 LINE L2 2659 3171 -101 2120 115 7 7 chr2 153236611 153236907 -97450947 - AluSg SINE Alu -14 296 1 427 293 86 86 chr2 153236907 153237008 -97450846 + L2 LINE L2 3171 3270 -2 1617 108 56 4 chr2 153237435 153237666 -97450188 + AluSx SINE Alu 30 272 -40 1014 104 0 0 chr2 153237666 153237820 -97450034 + (GGAA)n Simple_repeat Simple_repeat 1 154 0 2247 123 3 0 chr2 153237828 153238136 -97449718 + AluSx SINE Alu 1 309 -3 2351 99 0 6 chr2 153239021 153239334 -97448520 - AluSx SINE Alu -1 311 1 39 22 0 0 chr2 153239336 153239382 -97448472 + AT_rich Low_complexity Low_complexity 1 46 0 34 96 0 0 chr2 153240720 153240824 -97447030 + AT_rich Low_complexity Low_complexity 1 104 0 244 324 0 0 chr2 153243031 153243099 -97444755 - MIR SINE MIR 0 262 195 350 221 13 0 chr2 153243166 153243243 -97444611 - MIR SINE MIR -72 190 113 1798 100 3 91 chr2 153243723 153244052 -97443802 - AluSq SINE Alu -8 305 6 2023 198 27 17 chr2 153245677 153246043 -97441811 + MLT2D LTR ERVL 1 373 -41 249 57 0 0 chr2 153246043 153246078 -97441776 + (CA)n Simple_repeat Simple_repeat 2 36 0 2023 198 27 17 chr2 153246078 153246121 -97441733 + MLT2D LTR ERVL 373 414 0 1805 68 0 0 chr2 153246651 153246871 -97440983 + AluSp SINE Alu 90 309 -4 21 0 0 0 chr2 153247050 153247071 -97440783 + AT_rich Low_complexity Low_complexity 1 21 0 423 116 0 0 chr2 153247091 153247160 -97440694 + AluSp/q SINE Alu 243 311 -2 310 50 0 0 chr2 153247570 153247610 -97440244 - Alu SINE Alu -268 40 1 390 250 36 0 chr2 153247628 153247712 -97440142 + L2 LINE L2 3225 3311 -2 1488 172 26 22 chr2 153248125 153248393 -97439461 + AluJb SINE Alu 30 298 -14 22 0 0 0 chr2 153248980 153249002 -97438852 + AT_rich Low_complexity Low_complexity 1 22 0 1037 102 14 7 chr2 153250100 153250247 -97437607 - BC200 scRNA scRNA -47 153 6 243 222 153 0 chr2 153250260 153250332 -97437522 - L1ME LINE L1 -510 5611 5529 244 286 0 0 chr2 153251869 153251932 -97435922 + MLT1I LTR MaLR 347 409 0 1690 173 20 23 chr2 153252284 153252585 -97435269 + AluJo SINE Alu 1 300 -12 354 287 0 40 chr2 153253141 153253242 -97434612 + L2 LINE L2 3176 3272 0 310 290 137 8 chr2 153253353 153253484 -97434370 + MARNA DNA Mariner 16 163 -423 194 311 22 11 chr2 153253632 153253722 -97434132 - L2 LINE L2 -56 3257 3167 254 295 16 0 chr2 153254096 153254157 -97433697 + MIR SINE MIR 9 70 -192 1960 80 0 8 chr2 153254186 153254436 -97433418 - AluSg SINE Alu -62 248 1 1144 131 0 12 chr2 153254535 153254703 -97433151 - AluJb SINE Alu -8 304 139 1873 92 0 4 chr2 153254703 153254943 -97432911 - AluSq SINE Alu -74 239 1 21 36 0 0 chr2 153255608 153255636 -97432218 + AT_rich Low_complexity Low_complexity 1 28 0 1590 183 3 21 chr2 153255733 153256018 -97431836 - AluJo SINE Alu -32 280 1 345 274 145 8 chr2 153257573 153257690 -97430164 + MIR SINE MIR 10 142 -66 452 354 71 0 chr2 153257704 153257902 -97429952 - MIR SINE MIR -3 259 48 182 291 0 38 chr2 153257986 153258065 -97429789 + MIR SINE MIR 55 130 -78 367 254 85 49 chr2 153258222 153258408 -97429446 + MIR SINE MIR 15 207 -55 1999 110 21 25 chr2 153259133 153259437 -97428417 - AluSc SINE Alu 0 303 1 2319 99 3 0 chr2 153259585 153259878 -97427976 + AluSq SINE Alu 11 304 -9 272 324 82 33 chr2 153260199 153260381 -97427473 + MIR3 SINE MIR 12 202 -6 1510 111 14 0 chr2 153260520 153260737 -97427117 - AluSg/x SINE Alu -17 292 73 528 194 11 0 chr2 153310762 153310855 -97376999 + Tigger7 DNA MER2_type 2393 2486 -1 1160 243 23 4 chr2 153310935 153311198 -97376656 - L1ME1 LINE L1 -8 6158 5891 2236 225 38 28 chr2 153311212 153311790 -97376064 - L1ME1 LINE L1 -3 6163 5580 1455 183 54 35 chr2 153311795 153311891 -97375963 - L1ME1 LINE L1 -743 5403 5310 1840 158 0 3 chr2 153311891 153312182 -97375672 - AluJb SINE Alu -16 296 7 1455 183 54 35 chr2 153312182 153312326 -97375528 - L1ME1 LINE L1 -836 5310 5170 1534 151 76 16 chr2 153312326 153312643 -97375211 - MER44D DNA MER2_type -1 608 3 1455 183 54 35 chr2 153312643 153312852 -97375002 - L1ME1 LINE L1 -976 5170 4950 297 244 130 35 chr2 153313073 153313188 -97374666 + L2 LINE L2 3182 3307 -6 848 174 9 18 chr2 153313513 153313737 -97374117 + L1MA7 LINE L1 5800 6018 -282 33 25 0 0 chr2 153315926 153315966 -97371888 + AT_rich Low_complexity Low_complexity 1 40 0 249 257 114 57 chr2 153315968 153316143 -97371711 + MIR SINE MIR 66 250 -12 22 0 0 0 chr2 153316190 153316212 -97371642 + AT_rich Low_complexity Low_complexity 1 22 0 237 356 138 18 chr2 153316394 153316669 -97371185 - L2 LINE L2 -49 3223 2916 662 200 0 0 chr2 153317400 153317520 -97370334 + FLAM_A SINE Alu 1 120 -13 441 0 0 0 chr2 153317523 153317572 -97370282 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 207 0 0 0 chr2 153318538 153318561 -97369293 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2023 137 58 0 chr2 153318567 153318910 -97368944 - L1PA16 LINE L1 -9 6157 5795 1352 199 30 11 chr2 153319142 153319413 -97368441 - AluJo SINE Alu -4 308 33 472 264 123 43 chr2 153320110 153320387 -97367467 + L1ME4a LINE L1 5558 5856 -265 2553 142 138 14 chr2 153320436 153320655 -97367199 - MER7C DNA MER2_type -2429 599 408 630 175 0 9 chr2 153320655 153320769 -97367085 + L1PB4 LINE L1 6037 6149 -7 2553 142 138 14 chr2 153320769 153321035 -97366819 - MER7C DNA MER2_type -2620 408 54 248 306 56 9 chr2 153321468 153321576 -97366278 + L1ME LINE L1 5609 5721 -400 394 190 198 25 chr2 153322300 153322421 -97365433 - L2 LINE L2 0 3313 3172 2349 85 0 3 chr2 153324572 153324879 -97362975 + AluY SINE Alu 1 306 -5 22 94 0 0 chr2 153327159 153327223 -97360631 + AT_rich Low_complexity Low_complexity 1 64 0 21 36 0 0 chr2 153328402 153328430 -97359424 + AT_rich Low_complexity Low_complexity 1 28 0 956 169 36 0 chr2 153329669 153329835 -97358019 - AluJb SINE Alu -8 304 133 365 263 46 13 chr2 153329954 153330106 -97357748 + L1ME LINE L1 5575 5731 -390 1933 180 14 6 chr2 153331655 153331999 -97355855 - MER7A DNA MER2_type 0 346 2 285 312 35 71 chr2 153332524 153332665 -97355189 + MIR SINE MIR 110 245 -17 656 210 54 0 chr2 153333632 153333799 -97354055 - MER105 DNA DNA -1 203 28 1934 157 0 0 chr2 153334925 153335224 -97352630 + AluSx SINE Alu 1 299 -13 2170 92 3 7 chr2 153335973 153336267 -97351587 + AluSx SINE Alu 15 307 -5 21 0 0 0 chr2 153336393 153336414 -97351440 + AT_rich Low_complexity Low_complexity 1 21 0 197 255 0 0 chr2 153336779 153336826 -97351028 + MIR SINE MIR 93 139 -69 35 41 0 0 chr2 153337673 153337722 -97350132 + AT_rich Low_complexity Low_complexity 1 49 0 1923 139 10 10 chr2 153337729 153338030 -97349824 - AluJo SINE Alu -10 302 2 23 0 0 0 chr2 153339370 153339393 -97348461 + AT_rich Low_complexity Low_complexity 1 23 0 1202 153 7 143 chr2 153340728 153341035 -97346819 - AluJo SINE Alu -47 265 1 22 0 0 0 chr2 153341264 153341286 -97346568 + AT_rich Low_complexity Low_complexity 1 22 0 502 270 82 111 chr2 153342122 153342674 -97345180 + MLT1F LTR MaLR 1 536 -6 360 200 164 50 chr2 153342684 153342824 -97345030 + MIR SINE MIR 74 229 -33 1787 199 8 14 chr2 153342862 153343223 -97344631 + MER47B DNA MER2_type 59 417 -1 256 296 56 0 chr2 153343498 153343569 -97344285 + L2 LINE L2 3235 3309 -4 2089 108 3 18 chr2 153343879 153344165 -97343689 + AluSq SINE Alu 1 282 -31 1776 174 7 3 chr2 153344442 153344736 -97343118 - AluJb SINE Alu -17 295 1 557 210 12 48 chr2 153345385 153345552 -97342302 - MARNA DNA Mariner -98 488 328 1669 100 0 14 chr2 153345933 153346153 -97341701 + AluSg1 SINE Alu 1 217 -92 2321 120 0 0 chr2 153346537 153346845 -97341009 + AluSx SINE Alu 1 308 -4 971 150 24 18 chr2 153347778 153347945 -97339909 - AluSx SINE Alu -24 288 121 259 68 23 0 chr2 153347949 153347993 -97339861 - Alu SINE Alu -2 298 254 2289 97 0 7 chr2 153347997 153348297 -97339557 - AluSg SINE Alu -2 308 11 1083 82 0 20 chr2 153348325 153348471 -97339383 - AluSx SINE Alu -170 143 1 184 313 88 12 chr2 153349213 153349293 -97338561 + L2 LINE L2 2439 2524 -790 243 359 19 10 chr2 153349301 153349404 -97338450 + L2 LINE L2 3169 3272 0 1206 236 93 33 chr2 153349630 153350229 -97337625 - LTR41 LTR ERVL -11 762 41 1521 181 25 6 chr2 153350247 153350561 -97337293 + MER47A DNA MER2_type 47 366 0 309 51 0 0 chr2 153350638 153350677 -97337177 + (TAA)n Simple_repeat Simple_repeat 1 39 0 399 307 129 6 chr2 153350970 153351133 -97336721 + MIR SINE MIR 14 196 -66 428 208 77 15 chr2 153351212 153351342 -97336512 + L2 LINE L2 3170 3307 -6 280 301 82 48 chr2 153351496 153351630 -97336224 + MIR SINE MIR 41 182 -80 198 0 0 0 chr2 153351630 153351652 -97336202 + (TAAAA)n Simple_repeat Simple_repeat 5 26 0 280 301 82 48 chr2 153351652 153351663 -97336191 + MIR SINE MIR 182 191 -71 2185 110 3 0 chr2 153352003 153352304 -97335550 + AluSc SINE Alu 2 303 -6 205 216 0 0 chr2 153355154 153355191 -97332663 + L2 LINE L2 2715 2751 -563 188 86 29 0 chr2 153355761 153355796 -97332058 + (GA)n Simple_repeat Simple_repeat 2 37 0 827 326 44 39 chr2 153355848 153356404 -97331450 + L1MEc LINE L1 35 586 -5810 1413 98 20 82 chr2 153356404 153356590 -97331264 + MER30 DNA MER1_type 1 197 -33 1912 128 14 3 chr2 153356590 153356872 -97330982 + AluSx SINE Alu 1 285 -27 189 94 0 0 chr2 153356872 153356904 -97330950 + (TTAA)n Simple_repeat Simple_repeat 3 34 0 1413 98 20 82 chr2 153356904 153356961 -97330893 + MER30 DNA MER1_type 195 230 0 827 326 44 39 chr2 153356961 153357259 -97330595 + L1MEc LINE L1 586 894 -5502 288 273 81 0 chr2 153357259 153357358 -97330496 - MIR SINE MIR -149 113 7 193 333 15 0 chr2 153357549 153357615 -97330239 - MIR SINE MIR -12 250 184 341 99 37 74 chr2 153357638 153357719 -97330135 - AluSp/q SINE Alu 0 303 226 29 60 0 0 chr2 153358603 153358653 -97329201 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr2 153359082 153359106 -97328748 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 153359346 153359368 -97328486 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 153365380 153365411 -97322443 + AT_rich Low_complexity Low_complexity 1 31 0 1395 173 36 85 chr2 153366830 153367136 -97320718 + AluJo SINE Alu 1 291 -21 21 57 0 0 chr2 153367291 153367326 -97320528 + AT_rich Low_complexity Low_complexity 1 35 0 2226 112 3 16 chr2 153367860 153368172 -97319682 - AluSg SINE Alu -2 308 1 1798 153 7 3 chr2 153368848 153369155 -97318699 - AluJo SINE Alu 0 308 1 329 296 157 0 chr2 153369637 153369752 -97318102 - L2 LINE L2 -1 3271 3139 251 305 86 0 chr2 153371688 153371793 -97316061 + MER81 DNA DNA 1 114 0 229 26 26 26 chr2 153372068 153372107 -97315747 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1679 178 0 7 chr2 153372110 153372391 -97315463 - AluJb SINE Alu -30 282 4 189 0 0 0 chr2 153372639 153372660 -97315194 + (A)n Simple_repeat Simple_repeat 1 21 0 1460 162 68 0 chr2 153372668 153372924 -97314930 + AluJb SINE Alu 32 303 0 1578 158 15 8 chr2 153373149 153373408 -97314446 + AluSx SINE Alu 5 265 -47 413 302 12 53 chr2 153374709 153374804 -97313050 + MLT1H1 LTR MaLR 1 88 -467 956 181 81 126 chr2 153374804 153375113 -97312741 - AluJo SINE Alu -6 296 2 413 302 12 53 chr2 153375113 153375186 -97312668 + MLT1H1 LTR MaLR 88 162 -393 238 219 0 31 chr2 153375313 153375377 -97312477 + MLT1H1 LTR MaLR 488 549 -6 891 231 42 9 chr2 153375394 153375610 -97312244 + MER58A DNA MER1_type 1 223 -1 2427 98 10 0 chr2 153375673 153375979 -97311875 - AluSg SINE Alu -1 309 1 330 188 78 0 chr2 153376093 153376157 -97311697 + MIR3 SINE MIR 89 157 -51 347 238 98 8 chr2 153376232 153376354 -97311500 - MER103 DNA DNA -22 144 12 287 273 26 0 chr2 153377255 153377332 -97310522 + LTR16B LTR ERVL 386 464 0 624 281 84 29 chr2 153377619 153377857 -97309997 + MIR SINE MIR 12 262 0 216 287 241 0 chr2 153377883 153377991 -97309863 - L2 LINE L2 0 3313 3180 436 231 9 9 chr2 153378020 153378128 -97309726 - MIR SINE MIR -1 261 154 35 24 0 0 chr2 153381438 153381480 -97306374 + AT_rich Low_complexity Low_complexity 1 42 0 1884 167 0 26 chr2 153381541 153381846 -97306008 - AluSx SINE Alu -15 297 1 1825 177 0 0 chr2 153381959 153382247 -97305607 - AluJo SINE Alu -24 288 1 321 187 82 60 chr2 153383680 153383814 -97304040 - MER103 DNA DNA -27 139 3 338 240 80 30 chr2 153384203 153384303 -97303551 + L2 LINE L2 3205 3309 -4 838 122 0 0 chr2 153386795 153386910 -97300944 + AluSq/x SINE Alu 1 115 -197 186 318 67 78 chr2 153387788 153387967 -97299887 - MIR3 SINE MIR -31 177 1 2139 134 0 13 chr2 153388171 153388478 -97299376 - AluSx SINE Alu -8 304 2 316 292 102 30 chr2 153389722 153389899 -97297955 + MIR SINE MIR 24 210 -52 2451 93 3 0 chr2 153390890 153391202 -97296652 - AluSp SINE Alu 0 313 1 206 329 175 15 chr2 153392502 153392639 -97295215 + L3 LINE CR1 1415 1573 -4 390 282 176 7 chr2 153392754 153392896 -97294958 + MLT1J1 LTR MaLR 1 166 -280 346 224 20 23 chr2 153392995 153393111 -97294743 + MLT1J1 LTR MaLR 358 503 -8 261 229 21 62 chr2 153393723 153393819 -97294035 - MARNA DNA Mariner -24 562 471 294 29 0 0 chr2 153393889 153393924 -97293930 + (CA)n Simple_repeat Simple_repeat 2 36 0 32 26 0 0 chr2 153393972 153394011 -97293843 + AT_rich Low_complexity Low_complexity 1 39 0 365 186 0 14 chr2 153394917 153394987 -97292867 - L2 LINE L2 0 3313 3245 22 0 0 0 chr2 153398041 153398063 -97289791 + AT_rich Low_complexity Low_complexity 1 22 0 729 315 60 39 chr2 153398247 153398365 -97289489 - L2 LINE L2 -5 3308 3194 1479 154 17 9 chr2 153398365 153398598 -97289256 - MER46A DNA MER2_type 0 236 2 729 315 60 39 chr2 153398598 153398895 -97288959 - L2 LINE L2 -119 3194 2884 2114 179 54 5 chr2 153398915 153399301 -97288553 + MSTA LTR MaLR 1 409 -19 2176 120 17 0 chr2 153399301 153399600 -97288254 + AluSg SINE Alu 1 304 -6 2114 179 54 5 chr2 153399600 153399621 -97288233 + MSTA LTR MaLR 409 428 0 6739 56 29 38 chr2 153400134 153401088 -97286766 - SVA Other Other -8 1378 433 422 18 0 18 chr2 153401105 153401162 -97286692 - SVA Other Other -520 866 811 465 154 11 80 chr2 153401765 153401953 -97285901 + (TTATA)n Simple_repeat Simple_repeat 1 175 0 429 138 28 39 chr2 153401974 153402155 -97285699 + (TA)n Simple_repeat Simple_repeat 2 180 0 303 274 0 12 chr2 153402192 153402276 -97285578 - L1MC4 LINE L1 -1346 6696 6614 1196 224 9 5 chr2 153402302 153402525 -97285329 - MER58A DNA MER1_type 0 224 1 212 184 0 0 chr2 153403314 153403352 -97284502 + (TA)n Simple_repeat Simple_repeat 2 39 0 751 218 115 6 chr2 153403569 153403683 -97284171 + AluJo SINE Alu 2 139 -173 279 0 0 0 chr2 153403683 153403714 -97284140 + (CA)n Simple_repeat Simple_repeat 2 32 0 751 218 115 6 chr2 153403714 153403755 -97284099 + AluJo SINE Alu 139 174 -138 1110 141 11 32 chr2 153403888 153404073 -97283781 + FRAM SINE Alu 1 176 0 253 326 61 20 chr2 153405290 153405437 -97282417 + L2 LINE L2 1470 1622 -1692 2184 93 3 39 chr2 153407014 153407324 -97280530 - AluSg SINE Alu -11 299 1 956 194 12 0 chr2 153407328 153407498 -97280356 - AluJ SINE Alu -4 308 137 2292 78 0 0 chr2 153409165 153409485 -97278369 + AluSg SINE Alu 1 320 0 2431 63 0 38 chr2 153409487 153409804 -97278050 + AluY SINE Alu 1 305 -6 292 325 86 0 chr2 153410303 153410420 -97277434 + MIR SINE MIR 47 173 -89 198 336 16 16 chr2 153410446 153410570 -97277284 - MIR SINE MIR -10 252 29 197 152 0 0 chr2 153410621 153410654 -97277200 + L2 LINE L2 3262 3294 -19 928 158 0 0 chr2 153411124 153411257 -97276597 - AluJ SINE Alu -169 133 1 221 185 31 31 chr2 153411923 153411988 -97275866 + (GTTTG)n Simple_repeat Simple_repeat 3 67 0 515 150 0 0 chr2 153412513 153412593 -97275261 + AluY SINE Alu 219 298 -13 419 250 76 42 chr2 153412783 153412927 -97274927 + MIR SINE MIR 25 173 -89 759 213 59 6 chr2 153413092 153413311 -97274543 - L1MB7 LINE L1 0 6184 5946 1659 174 19 29 chr2 153413423 153413733 -97274121 + AluJb SINE Alu 1 307 -5 207 243 81 103 chr2 153413906 153414017 -97273837 + MIR SINE MIR 124 233 -29 964 143 45 108 chr2 153414017 153414240 -97273614 + MER3 DNA MER1_type 1 209 0 207 243 81 103 chr2 153414240 153414264 -97273590 + MIR SINE MIR 233 256 -6 2331 100 10 0 chr2 153414330 153414630 -97273224 + AluSx SINE Alu 1 303 -9 326 194 32 54 chr2 153415542 153415635 -97272219 - MIR SINE MIR -64 198 108 22 35 0 0 chr2 153416138 153416167 -97271687 + AT_rich Low_complexity Low_complexity 1 29 0 226 239 141 33 chr2 153417833 153417925 -97269929 + L2 LINE L2 3171 3272 0 693 285 97 65 chr2 153418111 153418385 -97269469 + L1M4 LINE L1 4665 4929 -1217 1784 203 0 0 chr2 153418385 153418685 -97269169 - AluSx SINE Alu -12 300 1 693 285 97 65 chr2 153418685 153419039 -97268815 + L1M4 LINE L1 4929 5313 -833 302 138 12 75 chr2 153419077 153419157 -97268697 + L1 LINE L1 3669 3743 -2403 971 162 7 7 chr2 153419165 153419319 -97268535 + FRAM SINE Alu 8 161 -15 5639 136 52 13 chr2 153419325 153420240 -97267614 + L1 LINE L1 3729 4690 -1456 450 0 0 0 chr2 153420240 153420290 -97267564 + (CA)n Simple_repeat Simple_repeat 1 50 0 5639 136 52 13 chr2 153420290 153420402 -97267452 + L1 LINE L1 4690 4796 -1350 442 244 0 0 chr2 153420462 153420540 -97267314 + FRAM/FAM SINE Alu 1 76 -100 233 228 0 0 chr2 153420763 153420820 -97267034 + (TA)n Simple_repeat Simple_repeat 2 58 0 225 143 86 57 chr2 153420914 153420984 -97266870 - MIR SINE MIR 0 262 191 1851 134 7 13 chr2 153420990 153421289 -97266565 - AluSq SINE Alu -16 297 1 421 256 128 17 chr2 153421946 153422126 -97265728 - MIR SINE MIR -51 211 12 508 292 64 6 chr2 153422834 153423005 -97264849 + MIR SINE MIR 34 214 -48 1882 163 37 3 chr2 153426127 153426427 -97261427 - AluJb SINE Alu -2 310 1 1682 189 20 0 chr2 153427177 153427473 -97260381 - AluJo SINE Alu -8 304 3 1849 146 7 17 chr2 153428376 153428671 -97259183 + AluSx SINE Alu 1 292 -20 219 200 0 40 chr2 153428829 153428879 -97258975 + L2 LINE L2 3219 3266 -6 265 355 107 0 chr2 153428998 153429119 -97258735 + L2 LINE L2 3126 3259 -13 2342 98 7 0 chr2 153429683 153429979 -97257875 - AluSx SINE Alu -14 298 1 1593 121 26 15 chr2 153432528 153432792 -97255062 - L1MD3 LINE L1 0 7995 7729 508 346 78 36 chr2 153433666 153433998 -97253856 + L3b LINE CR1 1102 1447 -136 267 104 0 0 chr2 153434219 153434267 -97253587 + (TA)n Simple_repeat Simple_repeat 1 48 0 2279 79 0 38 chr2 153434296 153434614 -97253240 + AluSx SINE Alu 5 310 -2 25476 129 54 17 chr2 153434615 153438628 -97249226 - L1P3 LINE L1 -28 7541 3676 2271 99 0 3 chr2 153438628 153438932 -97248922 + AluY SINE Alu 1 303 -8 25476 129 54 17 chr2 153438932 153440705 -97247149 - L1P3 LINE L1 -3893 3676 929 2275 109 0 13 chr2 153440705 153441017 -97246837 + AluSq SINE Alu 1 308 -5 25476 129 54 17 chr2 153441017 153441349 -97246505 - L1P3 LINE L1 -6640 929 611 1134 236 0 5 chr2 153441898 153442118 -97245736 + MER20 DNA MER1_type 1 219 0 205 280 100 10 chr2 153442548 153442648 -97245206 + MIR SINE MIR 143 251 -11 2327 100 7 0 chr2 153442698 153442999 -97244855 + AluSx SINE Alu 1 303 -9 25 0 0 0 chr2 153443334 153443359 -97244495 + AT_rich Low_complexity Low_complexity 1 25 0 868 206 0 17 chr2 153444364 153444539 -97243315 - FRAM SINE Alu -4 172 1 403 212 37 138 chr2 153444631 153444820 -97243034 - MER96 DNA MER1_type? -5 170 1 180 0 0 0 chr2 153444994 153445014 -97242840 + (CAA)n Simple_repeat Simple_repeat 2 21 0 204 125 0 0 chr2 153445444 153445476 -97242378 + (TTC)n Simple_repeat Simple_repeat 2 33 0 1938 151 10 3 chr2 153445937 153446236 -97241618 + AluJo SINE Alu 1 301 -11 279 308 12 41 chr2 153446524 153446696 -97241158 + CT-rich Low_complexity Low_complexity 3 169 0 5727 133 72 9 chr2 153446848 153447187 -97240667 + Tigger3b DNA MER2_type 213 529 -2499 2201 99 0 19 chr2 153447187 153447500 -97240354 + AluSx SINE Alu 6 312 0 5727 133 72 9 chr2 153447500 153448119 -97239735 + Tigger3b DNA MER2_type 529 1231 0 1457 155 6 81 chr2 153449017 153449340 -97238514 + L1MC3 LINE L1 7479 7777 -8 323 301 110 18 chr2 153450082 153450245 -97237609 + L3 LINE CR1 852 1029 -548 * 414 270 54 60 chr2 153450244 153450496 -97237358 - MIR SINE MIR -10 252 3 268 351 56 35 chr2 153450532 153450817 -97237037 + L3 LINE CR1 1065 1355 -222 273 163 186 0 chr2 153450985 153451071 -97236783 + L1M4 LINE L1 5434 5535 -636 406 323 108 23 chr2 153451573 153451833 -97236021 - L2 LINE L2 -636 2678 2397 311 301 26 13 chr2 153452261 153452417 -97235437 - MER103 DNA DNA 0 166 9 318 308 33 42 chr2 153452613 153452733 -97235121 - MER5B DNA MER1_type -59 119 1 213 302 47 12 chr2 153452871 153452957 -97234897 + L2 LINE L2 3180 3268 -4 396 0 0 0 chr2 153453056 153453100 -97234754 + (CA)n Simple_repeat Simple_repeat 2 45 0 2182 106 3 23 chr2 153453190 153453493 -97234361 - AluSx SINE Alu -15 297 1 2356 159 69 21 chr2 153453650 153454116 -97233738 - L1MB7 LINE L1 -7 6177 5690 970 194 11 0 chr2 153454219 153454394 -97233460 - AluJo SINE Alu -22 290 114 185 186 34 68 chr2 153454519 153454578 -97233276 + MER5A DNA MER1_type 21 77 -112 * 299 277 261 0 chr2 153454548 153454667 -97233187 - MER5A DNA MER1_type -36 153 4 2163 116 0 42 chr2 153454814 153455124 -97232730 + AluSx SINE Alu 1 297 -15 4092 161 19 32 chr2 153455192 153455344 -97232510 + L1MB3 LINE L1 5450 5603 -580 2235 105 7 0 chr2 153455344 153455639 -97232215 + AluSx SINE Alu 1 297 -15 4092 161 19 32 chr2 153455639 153456230 -97231624 + L1MB3 LINE L1 5603 6183 0 294 210 30 90 chr2 153456354 153456454 -97231400 - MIR SINE MIR -64 198 105 2039 120 27 3 chr2 153456718 153457010 -97230844 + AluSx SINE Alu 1 299 -13 700 144 76 8 chr2 153457115 153457233 -97230621 - FLAM_C SINE Alu -16 127 2 2282 71 14 24 chr2 153457463 153457803 -97230051 + AluY SINE Alu 1 311 0 1886 189 20 23 chr2 153458015 153458255 -97229599 - MLT1D LTR MaLR -2 503 263 2180 108 150 26 chr2 153458255 153458636 -97229218 + MSTA LTR MaLR 1 428 0 1886 189 20 23 chr2 153458636 153458787 -97229067 - MLT1D LTR MaLR -242 263 113 673 189 8 8 chr2 153458807 153458929 -97228925 - FRAM SINE Alu -10 166 45 1629 103 19 0 chr2 153459037 153459251 -97228603 - AluSx SINE Alu -78 234 17 206 226 226 0 chr2 153459267 153459351 -97228503 + L2 LINE L2 1983 2085 -1229 196 316 188 8 chr2 153459357 153459474 -97228380 - L2 LINE L2 -9 3304 3167 797 251 86 22 chr2 153459526 153459677 -97228177 + LTR52 LTR ERVL 46 186 -235 1976 69 8 8 chr2 153459677 153459938 -97227916 + AluSg SINE Alu 44 304 -6 797 251 86 22 chr2 153459938 153460101 -97227753 + LTR52 LTR ERVL 186 380 -41 245 132 0 19 chr2 153461131 153461184 -97226670 + (CATA)n Simple_repeat Simple_repeat 2 53 0 2308 52 0 0 chr2 153461208 153461478 -97226376 - AluY SINE Alu -7 304 35 202 176 27 40 chr2 153461540 153461614 -97226240 + (TTATA)n Simple_repeat Simple_repeat 5 77 0 320 242 0 0 chr2 153461616 153461678 -97226176 - FRAM/FAM SINE Alu -102 64 3 376 341 39 0 chr2 153462167 153462296 -97225558 + L2 LINE L2 3137 3270 -2 2302 266 111 16 chr2 153462807 153463656 -97224198 - L2 LINE L2 -641 2673 1745 1013 216 127 0 chr2 153463665 153463910 -97223944 + Charlie4 DNA MER1_type 18 293 -1668 392 254 88 9 chr2 153463969 153464083 -97223771 + MIR SINE MIR 20 142 -120 618 206 43 0 chr2 153464108 153464249 -97223605 + Charlie4 DNA MER1_type 1809 1955 -6 2288 269 59 9 chr2 153464250 153464930 -97222924 - L2 LINE L2 -1527 1787 1074 1205 154 65 5 chr2 153465775 153465976 -97221878 + AluJb SINE Alu 1 213 -99 757 221 84 22 chr2 153466219 153466445 -97221409 + MER112 DNA MER1_type 8 247 -13 467 299 112 37 chr2 153466541 153467113 -97220741 + L1M4 LINE L1 4179 4793 -1353 1605 150 27 14 chr2 153467571 153467865 -97219989 + AluSx SINE Alu 1 298 -14 2276 112 0 0 chr2 153467951 153468247 -97219607 + AluSx SINE Alu 1 296 -16 2265 73 7 3 chr2 153468642 153468929 -97218925 - AluSg SINE Alu -18 292 5 1034 267 50 7 chr2 153469070 153469351 -97218503 + MLT1I LTR MaLR 102 394 -15 546 336 87 0 chr2 153470343 153470551 -97217303 - MIR SINE MIR -29 233 8 407 304 55 44 chr2 153470639 153470820 -97217034 - MER5A DNA MER1_type 0 189 7 2383 82 0 3 chr2 153470929 153471235 -97216619 + AluY SINE Alu 1 305 -6 2320 91 14 0 chr2 153471339 153471636 -97216218 - AluSq SINE Alu -12 301 1 1019 165 6 44 chr2 153471869 153472051 -97215803 - AluJo SINE Alu -137 175 1 260 257 23 22 chr2 153474975 153475068 -97212786 + HAL1b LINE L1 1185 6039 -78 484 304 13 27 chr2 153475330 153475554 -97212300 + L1MC4a LINE L1 5684 5904 -1904 190 203 16 16 chr2 153475583 153475647 -97212207 + (TA)n Simple_repeat Simple_repeat 1 64 0 50 59 0 0 chr2 153476972 153477057 -97210797 + AT_rich Low_complexity Low_complexity 1 85 0 811 175 47 12 chr2 153477280 153477451 -97210403 + MLT1C LTR MaLR 1 177 -213 1319 130 58 0 chr2 153477452 153477659 -97210195 + AluSg/x SINE Alu 83 301 -11 987 245 72 25 chr2 153477670 153477948 -97209906 + MLT1C LTR MaLR 177 467 0 558 94 0 59 chr2 153477948 153478033 -97209821 - MADE1 DNA Mariner 0 80 1 426 253 11 92 chr2 153478241 153478459 -97209395 - MIR SINE MIR -54 208 13 181 250 62 0 chr2 153479226 153479274 -97208580 - MIR SINE MIR -34 228 178 2409 82 0 0 chr2 153479370 153479664 -97208190 + AluSc SINE Alu 1 294 -15 383 315 45 25 chr2 153480041 153480241 -97207613 + MIR SINE MIR 20 223 -39 1015 335 158 31 chr2 153480733 153482301 -97205553 + L2 LINE L2 1479 3246 -26 343 376 106 16 chr2 153483563 153483866 -97203988 - LTR16C LTR ERVL -63 428 99 467 286 134 6 chr2 153486134 153486305 -97201549 - MIR SINE MIR -52 210 18 520 212 123 53 chr2 153487591 153487761 -97200093 - MIR SINE MIR -33 229 48 3243 176 29 26 chr2 153488430 153488493 -97199361 - L1MB5 LINE L1 0 6174 6113 1837 125 66 24 chr2 153488493 153488782 -97199072 + AluSx SINE Alu 1 301 -11 3243 176 29 26 chr2 153488782 153489337 -97198517 - L1MB5 LINE L1 -61 6113 5554 1992 121 30 23 chr2 153489647 153489952 -97197902 - AluSx SINE Alu -5 307 1 311 314 90 66 chr2 153489961 153490355 -97197499 + L2 LINE L2 2695 3105 -167 198 103 0 0 chr2 153490995 153491024 -97196830 + (CA)n Simple_repeat Simple_repeat 2 30 0 413 256 31 44 chr2 153491277 153491437 -97196417 + MIR SINE MIR 48 205 -57 2258 110 0 10 chr2 153491891 153492191 -97195663 + AluSx SINE Alu 1 297 -15 1366 174 104 0 chr2 153492607 153492848 -97195006 - AluJo SINE Alu -44 268 3 363 44 0 0 chr2 153493255 153493300 -97194554 + (CA)n Simple_repeat Simple_repeat 2 46 0 4270 161 16 1 chr2 153493678 153494406 -97193448 + L1PA16 LINE L1 5419 6157 -9 732 225 62 10 chr2 153494511 153494705 -97193149 + MIR SINE MIR 59 262 0 285 138 9 184 chr2 153494979 153495088 -97192766 + MER102b DNA MER1_type 243 332 -9 216 97 0 0 chr2 153495116 153495147 -97192707 + (T)n Simple_repeat Simple_repeat 1 31 0 381 276 61 84 chr2 153495596 153495815 -97192039 + MLT1J LTR MaLR 2 176 -274 2496 63 3 3 chr2 153495828 153496129 -97191725 + AluY SINE Alu 1 301 -10 342 0 0 0 chr2 153497151 153497189 -97190665 + (CA)n Simple_repeat Simple_repeat 1 38 0 319 250 14 61 chr2 153498537 153498685 -97189169 - L1ME4a LINE L1 0 6121 5981 469 249 73 23 chr2 153498886 153499063 -97188791 - L1ME4a LINE L1 -442 5679 5494 195 319 145 7 chr2 153499332 153499470 -97188384 + MER5B DNA MER1_type 2 158 -20 25 0 0 0 chr2 153501913 153501938 -97185916 + AT_rich Low_complexity Low_complexity 1 25 0 1282 213 45 45 chr2 153501989 153502341 -97185513 - MLT1A1 LTR MaLR 0 365 14 2341 84 7 0 chr2 153502936 153503233 -97184621 - AluSg SINE Alu -11 299 1 1011 99 8 0 chr2 153503235 153503366 -97184488 - AluSq/x SINE Alu -181 132 1 1048 115 0 0 chr2 153503379 153503518 -97184336 - AluSg/x SINE Alu -20 292 154 657 179 68 8 chr2 153503654 153503793 -97184061 - FLAM_C SINE Alu 0 143 1 1621 69 5 10 chr2 153504365 153504590 -97183264 + AluY SINE Alu 82 305 0 650 111 0 20 chr2 153505265 153505364 -97182490 + AluJ/FRAM SINE Alu 214 310 -2 1363 220 108 62 chr2 153505919 153506110 -97181744 + MLT1D LTR MaLR 1 182 -323 2499 55 0 0 chr2 153506110 153506400 -97181454 + AluY SINE Alu 1 290 -21 1363 220 108 62 chr2 153506400 153506689 -97181165 + MLT1D LTR MaLR 182 503 -2 2121 119 33 7 chr2 153506898 153507201 -97180653 + AluSx SINE Alu 1 311 -1 351 309 5 66 chr2 153507241 153507430 -97180424 + MIR SINE MIR 14 191 -64 295 306 19 46 chr2 153508385 153508493 -97179361 + MER5B DNA MER1_type 74 178 0 828 259 28 2 chr2 153509122 153509365 -97178489 + MIR SINE MIR 4 252 -10 342 359 42 14 chr2 153509381 153509593 -97178261 + L2 LINE L2 2297 2514 -800 609 255 135 10 chr2 153509853 153510053 -97177801 - MIR SINE MIR -24 238 14 2206 93 3 75 chr2 153510261 153510593 -97177261 + AluSq SINE Alu 1 308 -5 226 132 19 38 chr2 153510739 153510792 -97177062 + (CGGGG)n Simple_repeat Simple_repeat 3 54 0 423 240 0 20 chr2 153510878 153511028 -97176826 + AluJb SINE Alu 138 284 -28 258 81 0 0 chr2 153511029 153511066 -97176788 + (CA)n Simple_repeat Simple_repeat 2 38 0 332 218 11 0 chr2 153511720 153511807 -97176047 + (TGGA)n Simple_repeat Simple_repeat 3 90 0 2073 108 17 3 chr2 153513193 153513480 -97174374 + AluSc SINE Alu 1 291 -18 1365 139 14 170 chr2 153515156 153515574 -97172280 - THE1A LTR MaLR -2 353 1 2291 91 0 10 chr2 153515660 153515957 -97171897 - AluSq SINE Alu -19 294 1 1634 161 27 27 chr2 153516260 153516552 -97171302 + AluJo SINE Alu 1 292 -20 2298 105 7 3 chr2 153516996 153517301 -97170553 + AluSx SINE Alu 1 306 -6 1483 251 102 18 chr2 153518338 153518601 -97169253 + L2 LINE L2 1449 1689 -1625 2122 123 17 0 chr2 153518601 153518901 -97168953 - AluSx SINE Alu -7 305 1 1483 251 102 18 chr2 153518901 153519127 -97168727 + L2 LINE L2 1689 1979 -1335 338 118 0 0 chr2 153519128 153519179 -97168675 - Alu SINE Alu -2 299 249 382 240 29 0 chr2 153521590 153521694 -97166160 - L1ME3A LINE L1 -5 6165 6059 1985 145 3 7 chr2 153522338 153522641 -97165213 + AluJo SINE Alu 1 302 -10 544 230 98 47 chr2 153522759 153523118 -97164736 + LTR33 LTR ERVL 86 492 -29 2544 72 0 0 chr2 153523760 153524064 -97163790 + AluY SINE Alu 1 304 -7 254 351 43 0 chr2 153524073 153524167 -97163687 + MIR SINE MIR 52 149 -59 377 306 75 46 chr2 153524400 153524515 -97163339 + L1ME4a LINE L1 5581 5691 -430 2445 84 10 3 chr2 153524515 153524823 -97163031 + AluSx SINE Alu 1 310 -2 377 306 75 46 chr2 153524823 153525079 -97162775 + L1ME4a LINE L1 5691 5963 -158 479 256 29 17 chr2 153525245 153525417 -97162437 - MER104 DNA MER2_type -4 176 3 23 0 0 0 chr2 153526314 153526337 -97161517 + AT_rich Low_complexity Low_complexity 1 23 0 399 224 105 53 chr2 153526844 153526996 -97160858 - MIR3 SINE MIR -30 178 19 393 53 0 28 chr2 153527206 153527277 -97160577 + Alu SINE Alu 249 301 0 189 0 0 0 chr2 153528334 153528355 -97159499 + (A)n Simple_repeat Simple_repeat 1 21 0 208 170 21 21 chr2 153529861 153529908 -97157946 + G-rich Low_complexity Low_complexity 3 49 0 284 297 9 45 chr2 153531242 153531353 -97156501 + MIR SINE MIR 40 146 -62 620 281 94 0 chr2 153534704 153534907 -97152947 + MIR SINE MIR 8 229 -33 252 268 216 39 chr2 153536463 153536694 -97151160 + L2 LINE L2 2695 2966 -348 221 290 14 43 chr2 153536767 153536836 -97151018 + L2 LINE L2 3156 3222 -50 184 248 28 138 chr2 153537199 153537344 -97150510 + L2 LINE L2 2910 3038 -234 746 276 118 9 chr2 153540139 153540454 -97147400 - L3 LINE CR1 -6 1571 1223 241 301 96 0 chr2 153541215 153541298 -97146556 + MIR3 SINE MIR 12 102 -106 336 328 24 16 chr2 153542871 153542996 -97144858 + MIR SINE MIR 25 150 -112 2311 109 0 0 chr2 153543605 153543907 -97143947 - AluSx SINE Alu -6 306 5 4659 46 6 40 chr2 153544547 153545619 -97142235 + MER11A LTR ERVK 1 1261 -5 312 309 54 57 chr2 153545643 153545941 -97141913 + L3 LINE CR1 632 928 -649 494 299 218 15 chr2 153545984 153546348 -97141506 + L3 LINE CR1 1076 1535 -42 1949 147 0 34 chr2 153546348 153546668 -97141186 - AluJo SINE Alu -3 309 1 494 299 218 15 chr2 153546668 153546715 -97141139 + L3 LINE CR1 1535 1571 -6 2025 140 0 0 chr2 153546838 153547131 -97140723 + AluSx SINE Alu 1 293 -19 1593 178 65 0 chr2 153547715 153547990 -97139864 + AluJb SINE Alu 1 293 -19 359 153 0 0 chr2 153548004 153548076 -97139778 + MIR SINE MIR 136 207 -55 737 163 116 20 chr2 153548078 153548225 -97139629 + FRAM SINE Alu 8 168 -8 224 213 82 0 chr2 153548250 153548311 -97139543 + MIR SINE MIR 197 262 0 208 280 0 0 chr2 153548311 153548361 -97139493 + (TTA)n Simple_repeat Simple_repeat 3 52 0 2252 101 3 3 chr2 153548375 153548671 -97139183 + AluSq SINE Alu 1 296 -17 300 191 274 0 chr2 153548690 153548774 -97139080 + MER81 DNA DNA 5 111 -3 275 212 109 129 chr2 153549638 153549831 -97138023 - MER5A DNA MER1_type 0 189 1 329 172 0 0 chr2 153550085 153550143 -97137711 + Charlie4 DNA MER1_type 175 232 -1729 700 175 54 95 chr2 153550343 153550520 -97137334 + MLT1A2 LTR MaLR 1 160 -230 2499 84 0 3 chr2 153550520 153550829 -97137025 + AluSg SINE Alu 1 308 -2 700 175 54 95 chr2 153550829 153550921 -97136933 + MLT1A2 LTR MaLR 160 254 -136 2148 167 8 11 chr2 153550923 153551289 -97136565 + MLT1A1 LTR MaLR 1 365 0 3118 42 31 0 chr2 153551767 153552148 -97135706 - L1PA5 LINE L1 0 6154 5762 495 0 0 0 chr2 153552148 153552202 -97135652 + L1PA5 LINE L1 5731 5784 -370 478 214 97 0 chr2 153552448 153552551 -97135303 - MER81 DNA DNA -1 113 1 304 242 144 20 chr2 153553487 153553640 -97134214 - MIR3 SINE MIR -5 203 32 1674 166 51 14 chr2 153553990 153554285 -97133569 + AluJo SINE Alu 1 306 -6 214 332 24 26 chr2 153554341 153554530 -97133324 - L2 LINE L2 -297 3016 2825 2112 90 11 4 chr2 153556584 153556861 -97130993 + AluSp SINE Alu 1 279 -34 747 62 0 0 chr2 153556861 153556958 -97130896 + (TC)n Simple_repeat Simple_repeat 2 98 0 198 103 0 0 chr2 153556957 153556986 -97130868 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 2598 149 42 15 chr2 153557171 153557605 -97130249 + L1MB2 LINE L1 5683 6132 -39 2013 138 17 0 chr2 153557605 153557903 -97129951 - AluSx SINE Alu -9 303 1 2598 149 42 15 chr2 153557903 153557939 -97129915 + L1MB2 LINE L1 6132 6166 -5 271 347 0 0 chr2 153557996 153558094 -97129760 + L3 LINE CR1 998 1095 -482 2427 78 0 0 chr2 153560440 153560736 -97127118 + AluSg1 SINE Alu 1 296 -13 2290 116 3 0 chr2 153561734 153562044 -97125810 - AluSx SINE Alu -1 311 1 439 262 63 8 chr2 153563175 153563301 -97124553 + L2 LINE L2 3180 3312 -1 26 0 0 0 chr2 153563981 153564007 -97123847 + AT_rich Low_complexity Low_complexity 1 26 0 4199 124 9 3 chr2 153564016 153564645 -97123209 + MER41B LTR ERV1 3 635 0 1652 176 15 4 chr2 153564649 153564921 -97122933 - AluJo SINE Alu -37 275 1 228 260 0 0 chr2 153564951 153565001 -97122853 - L1MC4 LINE L1 -1334 6708 6659 675 221 0 0 chr2 153565225 153565347 -97122507 + FLAM_A SINE Alu 1 122 -11 2384 94 3 0 chr2 153565511 153565818 -97122036 - AluSg SINE Alu -2 308 1 540 321 33 15 chr2 153566487 153566758 -97121096 + L1MC4a LINE L1 5652 5927 -1881 * 2022 150 3 0 chr2 153566518 153566831 -97121023 + L1MB3 LINE L1 5689 6002 -169 471 85 73 0 chr2 153566843 153566925 -97120929 + L1MB3 LINE L1 6096 6183 0 220 278 0 14 chr2 153567081 153567153 -97120701 + L2 LINE L2 3201 3271 -1 1078 164 38 52 chr2 153568242 153568262 -97119592 - MER20 DNA MER1_type -5 214 195 3995 166 15 61 chr2 153568262 153568912 -97118942 + LTR39 LTR ERV1 1 608 -175 1934 146 0 17 chr2 153568912 153569226 -97118628 + AluSx SINE Alu 1 309 0 3995 166 15 61 chr2 153569226 153569395 -97118459 + LTR39 LTR ERV1 608 783 0 1078 164 38 52 chr2 153569395 153569587 -97118267 - MER20 DNA MER1_type -24 195 5 411 340 6 19 chr2 153569990 153570152 -97117702 + MIR3 SINE MIR 43 202 -6 762 165 0 39 chr2 153670374 153670501 -97017353 + MLT1A1 LTR MaLR 244 365 0 2816 89 22 5 chr2 153671027 153671396 -97016458 + THE1C LTR MaLR 1 375 0 1114 124 37 50 chr2 153671769 153671987 -97015867 + L1MA9 LINE L1 6098 6312 0 1397 149 92 0 chr2 153672023 153672272 -97015582 + Tigger3(Golem) DNA MER2_type 1 272 -2757 189 0 0 0 chr2 153672454 153672475 -97015379 + (T)n Simple_repeat Simple_repeat 1 21 0 827 173 0 15 chr2 153672635 153672768 -97015086 + FLAM_A SINE Alu 2 132 -1 637 308 38 21 chr2 153673576 153673816 -97014038 + MIR SINE MIR 5 248 -14 2152 126 3 0 chr2 153677320 153677621 -97010233 - AluSx SINE Alu -10 302 1 238 209 269 0 chr2 153677625 153677692 -97010162 - L1MEc LINE L1 -3660 2555 2471 1716 248 13 13 chr2 153677697 153678145 -97009709 - L1MEc LINE L1 -5927 469 22 1870 174 0 0 chr2 153678163 153678467 -97009387 + AluJb SINE Alu 1 304 -8 876 182 5 94 chr2 153678797 153679000 -97008854 + AluJb SINE Alu 121 305 -7 337 170 0 0 chr2 153679479 153679532 -97008322 - L2 LINE L2 -3 3310 3258 241 218 75 83 chr2 153679670 153679803 -97008051 - MLT1L LTR MaLR -39 576 445 471 113 28 123 chr2 153679917 153680023 -97007831 - LTR32 LTR ERVL -6 465 370 1873 139 45 3 chr2 153680769 153681057 -97006797 - AluJb SINE Alu -12 300 1 2464 63 16 7 chr2 153683244 153683547 -97004307 - AluY SINE Alu -5 306 1 429 293 92 12 chr2 153684849 153685013 -97002841 + MIR SINE MIR 65 241 -21 325 308 132 13 chr2 153685165 153685324 -97002530 - MIR SINE MIR -6 256 79 2103 111 7 10 chr2 153685480 153685777 -97002077 - AluSx SINE Alu -7 305 10 2051 145 0 13 chr2 153686013 153686323 -97001531 + AluJb SINE Alu 1 306 -6 515 211 0 0 chr2 153687152 153687242 -97000612 - FLAM SINE Alu -12 131 42 351 140 0 0 chr2 153687342 153687399 -97000455 + Alu SINE Alu 246 302 0 247 304 52 20 chr2 153687699 153687825 -97000029 + MIR SINE MIR 81 208 -54 881 144 22 116 chr2 153688078 153688176 -96999678 + L1MA7 LINE L1 6068 6174 -117 1990 139 3 16 chr2 153688176 153688492 -96999362 - AluSx SINE Alu 0 312 1 881 144 22 116 chr2 153688492 153688650 -96999204 + L1MA7 LINE L1 6174 6288 -3 1752 155 0 65 chr2 153689082 153689404 -96998450 + AluJo SINE Alu 1 301 -11 27 73 0 0 chr2 153689492 153689547 -96998307 + AT_rich Low_complexity Low_complexity 1 55 0 273 268 0 14 chr2 153690051 153690122 -96997732 + MIR3 SINE MIR 111 180 -28 287 130 19 0 chr2 153690890 153690944 -96996910 + (TA)n Simple_repeat Simple_repeat 2 56 0 2145 102 46 0 chr2 153690944 153691229 -96996625 - AluSg SINE Alu -12 298 1 1652 143 15 84 chr2 153691803 153692138 -96995716 - AluJb SINE Alu 0 312 1 1259 90 94 25 chr2 153692412 153692613 -96995241 - AluSg/x SINE Alu -7 305 91 2204 109 3 16 chr2 153693042 153693355 -96994499 + AluSx SINE Alu 1 309 -3 707 173 74 89 chr2 153693898 153693984 -96993870 + MER3 DNA MER1_type 4 90 -119 1330 200 126 7 chr2 153693984 153694254 -96993600 - AluJb SINE Alu -10 302 1 707 173 74 89 chr2 153694254 153694369 -96993485 + MER3 DNA MER1_type 90 202 -7 658 232 48 18 chr2 153694450 153694618 -96993236 - MER5B DNA MER1_type 0 178 6 220 364 0 0 chr2 153694836 153694913 -96992941 - MIR SINE MIR -95 113 37 615 264 98 0 chr2 153695383 153695557 -96992297 - MIR SINE MIR -59 203 13 1994 128 0 37 chr2 153696579 153696876 -96990978 + AluSx SINE Alu 1 286 -26 297 298 11 24 chr2 153697654 153697766 -96990088 - MER5A DNA MER1_type -20 158 60 278 239 9 92 chr2 153697668 153697777 -96990077 + MER5A DNA MER1_type 44 143 -46 * 474 182 11 0 chr2 153698791 153698879 -96988975 + MER94 DNA DNA 2 90 -44 1786 133 70 13 chr2 153699206 153699521 -96988333 + MER2 DNA MER2_type 3 335 -10 2018 223 75 9 chr2 153699591 153700137 -96987717 - MER119 DNA MER1_type -1 582 1 360 239 23 181 chr2 153700321 153700586 -96987268 - MIR SINE MIR -3 259 38 342 298 97 8 chr2 153700714 153700838 -96987016 - MIR SINE MIR -110 152 18 257 167 22 44 chr2 153701287 153701377 -96986477 + Charlie5 DNA MER1_type 37 124 -2488 1325 178 32 9 chr2 153701377 153701692 -96986162 + Charlie5 DNA MER1_type 2236 2557 -55 290 155 71 24 chr2 153701715 153701799 -96986055 + Charlie5 DNA MER1_type 2498 2585 -27 3258 113 62 39 chr2 153701859 153702374 -96985480 - MER1A DNA MER1_type 0 527 1 520 136 0 0 chr2 153703115 153703203 -96984651 - L1MB8 LINE L1 -9 6169 6082 198 368 48 16 chr2 153704188 153704313 -96983541 + MER5A DNA MER1_type 26 154 -35 2471 163 32 32 chr2 153704787 153705290 -96982564 + MLT1D LTR MaLR 3 505 0 402 100 17 0 chr2 153705998 153706058 -96981796 - Alu SINE Alu -257 61 1 388 212 12 0 chr2 153706058 153706143 -96981711 - L1MB7 LINE L1 -69 6115 6030 1008 101 13 0 chr2 153706272 153706431 -96981423 - L1MA2 LINE L1 0 6304 6144 724 260 10 46 chr2 153706450 153706646 -96981208 - MIR SINE MIR -21 241 53 2310 105 0 0 chr2 153707625 153707919 -96979935 - AluSg SINE Alu -16 294 1 291 354 0 18 chr2 153708271 153708384 -96979470 - MIR3 SINE MIR -24 184 74 380 266 12 22 chr2 153709818 153709934 -96977920 - MER5B DNA MER1_type -77 101 3 2169 124 7 0 chr2 153710495 153710794 -96977060 + AluSx SINE Alu 1 301 -11 239 288 38 0 chr2 153710996 153711076 -96976778 - L1ME LINE L1 -557 5564 5482 197 354 42 42 chr2 153711108 153711252 -96976602 - L2 LINE L2 -4 3309 3166 1828 59 26 52 chr2 153711854 153712125 -96975729 + L1PA11 LINE L1 5909 6172 -2 210 71 0 0 chr2 153712138 153712166 -96975688 + (A)n Simple_repeat Simple_repeat 1 28 0 218 261 34 57 chr2 153712740 153712828 -96975026 + MIR3 SINE MIR 111 196 -12 772 47 0 38 chr2 153712876 153712982 -96974872 + L1PA10 LINE L1 6057 6158 -10 2034 115 3 3 chr2 153713513 153713800 -96974054 + AluSx SINE Alu 1 287 -25 230 269 65 11 chr2 153714137 153714230 -96973624 + MIR SINE MIR 119 216 -46 1875 152 7 3 chr2 153714619 153714908 -96972946 + AluJo SINE Alu 14 303 -9 226 276 22 54 chr2 153715876 153716038 -96971816 + MIR SINE MIR 25 254 -8 452 156 13 0 chr2 153718122 153718199 -96969655 + AluS SINE Alu 1 78 -234 2222 104 0 3 chr2 153721365 153721664 -96966190 - AluSg SINE Alu -12 298 1 620 271 93 36 chr2 153721710 153721935 -96965919 - MIR SINE MIR -17 245 8 1973 133 0 0 chr2 153723138 153723417 -96964437 + AluSg SINE Alu 1 279 -31 198 0 0 0 chr2 153723425 153723447 -96964407 + (TGGGGG)n Simple_repeat Simple_repeat 2 23 0 2052 136 0 13 chr2 153724207 153724508 -96963346 + AluSx SINE Alu 1 297 -15 240 359 155 0 chr2 153725762 153725865 -96961989 - L2 LINE L2 -20 3252 3134 1699 190 0 3 chr2 153725932 153726232 -96961622 - AluJo SINE Alu -13 299 1 700 243 6 17 chr2 153727112 153727289 -96960565 - MER5B DNA MER1_type -1 177 3 627 286 58 24 chr2 153728230 153728436 -96959418 + MIR SINE MIR 29 241 -21 826 231 24 0 chr2 153730026 153730195 -96957659 + AluJo SINE Alu 1 173 -139 1483 141 52 12 chr2 153730198 153730447 -96957407 + AluJo SINE Alu 42 300 -12 21 82 0 0 chr2 153730690 153730739 -96957115 + AT_rich Low_complexity Low_complexity 1 49 0 1364 169 94 8 chr2 153730743 153730878 -96956976 + AluJb SINE Alu 1 123 -189 1791 63 0 0 chr2 153730878 153731085 -96956769 + AluSc SINE Alu 1 207 -102 1364 169 94 8 chr2 153731085 153731204 -96956650 + AluJb SINE Alu 123 277 -35 195 282 0 90 chr2 153732698 153732776 -96955078 - L2 LINE L2 -8 3305 3235 2110 116 30 3 chr2 153733445 153733747 -96954107 - AluSx SINE Alu -2 310 1 288 310 0 0 chr2 153734249 153734336 -96953518 + (TA)n Simple_repeat Simple_repeat 1 87 0 1793 140 33 0 chr2 153734463 153734734 -96953120 + AluJb SINE Alu 1 280 -32 423 0 0 0 chr2 153736237 153736284 -96951570 + (TG)n Simple_repeat Simple_repeat 2 48 0 2137 110 0 3 chr2 153737673 153737976 -96949878 + AluSx SINE Alu 1 302 0 2194 134 66 47 chr2 153739448 153739872 -96947982 + MSTB1 LTR MaLR 1 432 0 345 297 72 0 chr2 153740881 153740992 -96946862 - L2 LINE L2 -1 3271 3153 2101 137 0 3 chr2 153741373 153741673 -96946181 + AluSx SINE Alu 1 299 -13 5466 206 128 17 chr2 153741987 153743692 -96944162 - L1MC4a LINE L1 -5 7803 5910 1482 199 91 26 chr2 153743692 153744234 -96943620 - MLT1E1 LTR MaLR -8 646 12 2005 109 7 7 chr2 153746571 153746845 -96941009 + AluSq SINE Alu 1 274 -39 308 272 62 91 chr2 153746849 153747092 -96940762 - MER102a DNA MER1_type 0 330 95 2183 118 0 19 chr2 153748408 153748722 -96939132 + AluSx SINE Alu 1 308 -4 2454 147 16 68 chr2 153749081 153749593 -96938261 - MER31A LTR ERV1 0 485 1 2012 143 0 3 chr2 153749911 153750212 -96937642 + AluSx SINE Alu 1 300 -12 339 103 221 0 chr2 153750263 153750331 -96937523 - AluSg/x SINE Alu 0 300 218 1395 133 0 10 chr2 153750431 153750627 -96937227 + AluSg/x SINE Alu 83 276 -36 832 173 20 13 chr2 153751158 153751308 -96936546 + FRAM SINE Alu 1 151 -15 537 237 70 32 chr2 153751617 153751773 -96936081 - MIR SINE MIR -43 219 58 583 245 104 25 chr2 153751829 153752070 -96935784 - MER46C DNA MER2_type 0 338 79 395 302 93 0 chr2 153752562 153752691 -96935163 - MER5B DNA MER1_type -37 141 1 287 286 7 13 chr2 153754158 153754315 -96933539 - MIR SINE MIR 0 262 26 218 297 81 14 chr2 153754684 153754758 -96933096 - MIR SINE MIR -79 183 105 1042 208 79 8 chr2 153755768 153756124 -96931730 - Charlie5 DNA MER1_type 0 2624 2244 483 236 8 0 chr2 153756126 153756249 -96931605 - Charlie5 DNA MER1_type -2488 124 1 649 263 111 23 chr2 153756492 153756709 -96931145 + MIR SINE MIR 13 248 -14 549 196 0 0 chr2 153759375 153759472 -96928382 + FLAM_C SINE Alu 35 131 -12 1467 184 85 3 chr2 153760301 153760584 -96927270 - AluJb SINE Alu -6 306 1 1485 171 61 52 chr2 153761041 153761403 -96926451 - MLT1A1 LTR MaLR 0 365 1 21 0 0 0 chr2 153762672 153762693 -96925161 + AT_rich Low_complexity Low_complexity 1 21 0 324 0 0 0 chr2 153763221 153763257 -96924597 + (TG)n Simple_repeat Simple_repeat 1 36 0 199 345 103 7 chr2 153763667 153763812 -96924042 + MIR SINE MIR 85 243 -19 711 188 8 0 chr2 153764262 153764395 -96923459 - AluJo SINE Alu -178 134 1 189 365 12 0 chr2 153765232 153765317 -96922537 - MIR3 SINE MIR -3 205 120 959 138 7 14 chr2 153765539 153765684 -96922170 + FRAM SINE Alu 8 151 -25 2216 96 10 0 chr2 153765696 153765987 -96921867 + AluSp SINE Alu 1 294 -19 2189 116 10 3 chr2 153766380 153766691 -96921163 - AluSq SINE Alu 0 313 1 280 281 23 70 chr2 153766853 153766981 -96920873 - L2 LINE L2 -534 2780 2659 * 337 298 29 58 chr2 153766929 153767100 -96920754 + MER5A DNA MER1_type 8 173 -16 2091 125 3 7 chr2 153767703 153768008 -96919846 + AluSx SINE Alu 1 304 -8 204 309 0 0 chr2 153768127 153768182 -96919672 - L2 LINE L2 -30 3242 3188 568 181 83 7 chr2 153769565 153769709 -96918145 + MER3 DNA MER1_type 31 185 -24 981 156 38 32 chr2 153769726 153769912 -96917942 - MER5A DNA MER1_type 0 189 3 456 201 138 32 chr2 153770489 153770678 -96917176 + L1MC5 LINE L1 7722 7930 -31 1596 206 0 17 chr2 153771244 153771545 -96916309 - AluJo SINE Alu -16 296 1 21 36 0 0 chr2 153772373 153772401 -96915453 + AT_rich Low_complexity Low_complexity 1 28 0 1942 151 13 22 chr2 153772819 153773130 -96914724 - AluJo SINE Alu -4 308 1 724 259 21 0 chr2 153774106 153774299 -96913555 - L1M3 LINE L1 -493 5687 5491 759 183 56 11 chr2 153774323 153774503 -96913351 - MLT1D LTR MaLR -317 188 1 481 205 0 0 chr2 153776209 153776292 -96911562 - Tigger3(Golem) DNA MER2_type -1 3028 2946 1135 122 58 47 chr2 153776310 153776561 -96911293 - L1MA9 LINE L1 -90 6201 5968 265 323 48 16 chr2 153776566 153776690 -96911164 + MIR3 SINE MIR 75 202 -6 195 260 73 73 chr2 153777557 153777615 -96910239 - MIR SINE MIR 0 262 205 1695 166 9 40 chr2 153777615 153777964 -96909890 - MER44D DNA MER2_type -1 608 1 195 260 73 73 chr2 153777964 153778028 -96909826 - MIR SINE MIR -56 206 140 327 359 51 0 chr2 153778065 153778182 -96909672 - MIR SINE MIR -112 150 28 544 302 68 5 chr2 153778720 153778912 -96908942 + MIR SINE MIR 47 250 -12 276 297 78 0 chr2 153779030 153779094 -96908760 - MIR SINE MIR -166 96 28 927 140 27 21 chr2 153779214 153779400 -96908454 + L1MB2 LINE L1 5984 6170 -1 260 312 119 81 chr2 153780425 153780720 -96907134 - L2 LINE L2 -1 3271 2966 885 352 93 25 chr2 153781535 153782483 -96905371 + L2 LINE L2 2254 3270 -2 549 319 39 10 chr2 153782688 153782895 -96904959 + MIR SINE MIR 31 243 -19 31 0 0 24 chr2 153783372 153783394 -96904460 + AT_rich Low_complexity Low_complexity 1 23 -18 2288 100 0 3 chr2 153783394 153783693 -96904161 + AluSq SINE Alu 1 298 -15 31 0 0 24 chr2 153783693 153783712 -96904142 + AT_rich Low_complexity Low_complexity 23 41 0 311 261 89 25 chr2 153785237 153785394 -96902460 + L1MC5 LINE L1 7507 7673 -288 197 256 0 0 chr2 153785395 153785434 -96902420 + MIR SINE MIR 202 240 -22 2142 121 72 26 chr2 153785553 153785899 -96901955 + THE1B LTR MaLR 1 362 -2 228 174 0 22 chr2 153787208 153787254 -96900600 - L1MB4 LINE L1 -48 6132 6088 194 240 27 53 chr2 153787931 153788006 -96899848 - MIR3 SINE MIR 0 208 136 334 193 0 72 chr2 153788104 153788187 -96899667 - MIR SINE MIR -55 153 77 460 329 115 28 chr2 153790064 153790568 -96897286 - L1MC4 LINE L1 -355 7687 7140 552 305 46 15 chr2 153790736 153791064 -96896790 - L1MC4 LINE L1 -973 7069 6732 1032 233 75 59 chr2 153791364 153791820 -96896034 - MLT1C LTR MaLR -4 463 1 465 235 204 42 chr2 153791910 153792170 -96895684 - MLT1J1 LTR MaLR -143 303 2 183 42 0 0 chr2 153793437 153793461 -96894393 + (CA)n Simple_repeat Simple_repeat 1 24 0 201 382 53 0 chr2 153793461 153793537 -96894317 - MIR SINE MIR -99 109 30 1899 121 57 4 chr2 153794561 153794842 -96893012 - AluSx SINE Alu -16 296 1 2426 198 50 85 chr2 153795419 153795682 -96892172 - L1ME LINE L1 -592 5574 5303 2404 104 0 0 chr2 153795682 153795989 -96891865 - AluSx SINE Alu -5 307 1 2426 198 50 85 chr2 153795989 153796991 -96890863 - L1ME LINE L1 -863 5303 4340 200 364 0 15 chr2 153798413 153798479 -96889375 + L2 LINE L2 2997 3061 -211 199 348 120 0 chr2 153800739 153800831 -96887023 - L2 LINE L2 -1 3312 3210 186 43 0 0 chr2 153800964 153800987 -96886867 + (CA)n Simple_repeat Simple_repeat 2 24 0 363 221 29 0 chr2 153800988 153801056 -96886798 + MIR SINE MIR 82 151 -111 2231 115 13 0 chr2 153801353 153801657 -96886197 - AluSx SINE Alu -4 308 1 1341 160 56 0 chr2 153802959 153803172 -96884682 + AluJb SINE Alu 65 289 -23 23 54 0 0 chr2 153803190 153803227 -96884627 + AT_rich Low_complexity Low_complexity 1 37 0 286 132 38 0 chr2 153803534 153803587 -96884267 - L1MB7 LINE L1 0 6184 6130 2029 9 0 0 chr2 153803696 153803925 -96883929 + L1PA2 LINE L1 5920 6148 -7 1602 134 0 4 chr2 153804222 153804453 -96883401 - AluJb SINE Alu 0 312 83 263 290 77 27 chr2 153804844 153805027 -96882827 - L1ME LINE L1 -285 5885 5694 419 220 88 0 chr2 153805061 153805152 -96882702 + MER5A DNA MER1_type 7 105 -84 322 215 13 0 chr2 153805355 153805434 -96882420 + MARNA DNA Mariner 312 391 -195 290 269 45 52 chr2 153805516 153805650 -96882204 + MIR SINE MIR 18 150 -58 180 0 0 0 chr2 153806807 153806827 -96881027 + (A)n Simple_repeat Simple_repeat 1 20 0 2174 104 30 7 chr2 153807212 153807511 -96880343 + AluSq SINE Alu 1 306 -7 22 0 0 0 chr2 153808490 153808512 -96879342 + AT_rich Low_complexity Low_complexity 1 22 0 2072 183 59 7 chr2 153809263 153809667 -96878187 - MSTB LTR MaLR -1 425 1 2082 120 13 3 chr2 153810021 153810321 -96877533 - AluSx SINE Alu -9 303 1 2356 178 107 16 chr2 153811311 153811823 -96876031 + MER68 LTR ERV1 4 562 0 295 346 37 25 chr2 153812883 153813045 -96874809 + MIR3 SINE MIR 40 203 -5 312 216 72 54 chr2 153813106 153813217 -96874637 - MER6 DNA MER2_type 0 865 32 368 242 144 23 chr2 153813493 153813625 -96874229 - MIR3 SINE MIR 0 208 61 2269 112 0 7 chr2 153813936 153814240 -96873614 + AluSx SINE Alu 1 302 -10 1521 176 70 4 chr2 153814818 153815091 -96872763 + AluJo SINE Alu 5 295 -17 488 271 42 70 chr2 153815104 153815318 -96872536 + MIR SINE MIR 52 259 -3 377 352 66 11 chr2 153816397 153816579 -96871275 - MIR SINE MIR -26 236 45 4486 197 62 58 chr2 153816632 153817209 -96870645 - Charlie1a DNA MER1_type -1321 1440 867 1860 148 21 7 chr2 153817209 153817493 -96870361 + AluJb SINE Alu 1 288 -24 4486 197 62 58 chr2 153817493 153818346 -96869508 - Charlie1a DNA MER1_type -1894 867 5 22 35 0 0 chr2 153821172 153821201 -96866653 + AT_rich Low_complexity Low_complexity 1 29 0 1830 93 37 4 chr2 153822440 153822686 -96865168 - AluSq SINE Alu -59 254 1 21 71 0 0 chr2 153823687 153823729 -96864125 + AT_rich Low_complexity Low_complexity 1 42 0 2197 113 0 13 chr2 153824657 153824959 -96862895 - AluSq SINE Alu -15 298 1 250 303 12 55 chr2 153826697 153826862 -96860992 + CT-rich Low_complexity Low_complexity 5 162 0 2126 122 0 35 chr2 153827521 153827832 -96860022 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr2 153827858 153827880 -96859974 + (T)n Simple_repeat Simple_repeat 1 22 0 765 154 71 6 chr2 153828587 153828756 -96859098 + MER65A LTR ERV1 232 411 -34 1886 160 3 3 chr2 153828836 153828848 -96859006 - AluJo SINE Alu -12 300 289 213 39 0 0 chr2 153828848 153828874 -96858980 + (ATG)n Simple_repeat Simple_repeat 2 27 0 1886 160 3 3 chr2 153828874 153829161 -96858693 - AluJo SINE Alu -22 290 1 285 305 121 42 chr2 153829404 153829594 -96858260 - MIR SINE MIR -14 248 44 1946 114 85 0 chr2 153831300 153831572 -96856282 - AluSg SINE Alu -15 295 1 2508 115 25 0 chr2 153831607 153831973 -96855881 - THE1C LTR MaLR 0 375 1 1115 141 5 38 chr2 153832614 153832799 -96855055 + AluJb SINE Alu 134 312 0 2230 122 3 7 chr2 153832809 153833112 -96854742 + AluSx SINE Alu 1 302 -10 1167 235 28 31 chr2 153833916 153834239 -96853615 + L1M4 LINE L1 4 325 -6217 222 265 0 0 chr2 153834240 153834289 -96853565 + CT-rich Low_complexity Low_complexity 2 50 0 565 143 121 43 chr2 153835610 153835832 -96852022 + AluJ SINE Alu 2 289 -23 268 256 120 43 chr2 153836539 153836656 -96851198 + MIR3 SINE MIR 38 163 -45 21 36 0 0 chr2 153836712 153836740 -96851114 + AT_rich Low_complexity Low_complexity 1 28 0 2336 101 0 0 chr2 153837237 153837545 -96850309 + AluSc SINE Alu 1 308 -1 618 207 0 0 chr2 153838385 153838501 -96849353 + L1PB3 LINE L1 6032 6147 -7 25 0 0 0 chr2 153838676 153838701 -96849153 + AT_rich Low_complexity Low_complexity 1 25 0 191 224 138 17 chr2 153838912 153838970 -96848884 - MER5A DNA MER1_type 0 189 125 312 243 127 72 chr2 153839315 153839496 -96848358 - L2 LINE L2 0 3313 3123 695 249 64 17 chr2 153839529 153839702 -96848152 - MIR SINE MIR -51 211 31 4467 261 94 14 chr2 153839719 153841285 -96846569 - L2 LINE L2 -206 3107 1419 431 203 333 7 chr2 153841318 153841456 -96846398 - Tigger2 DNA MER2_type -1 2717 2535 195 286 261 0 chr2 153841456 153841575 -96846279 - MER5B DNA MER1_type -28 150 1 405 232 20 20 chr2 153841709 153841808 -96846046 - AluJo SINE Alu -101 211 113 2287 109 3 3 chr2 153842498 153842810 -96845044 + AluSx SINE Alu 1 312 0 207 175 0 0 chr2 153844336 153844376 -96843478 + T-rich Low_complexity Low_complexity 2 41 0 441 266 143 12 chr2 153845061 153845250 -96842604 - MIR SINE MIR -13 249 37 26 64 0 0 chr2 153845733 153845780 -96842074 + AT_rich Low_complexity Low_complexity 1 47 0 3294 145 14 0 chr2 153846370 153846875 -96840979 - MER41E LTR ERV1 0 512 1 308 295 43 14 chr2 153848523 153848662 -96839192 - LTR67 LTR ERVL 0 557 415 1003 277 71 81 chr2 153849943 153850439 -96837415 - MLT1G LTR MaLR -63 527 40 228 372 36 36 chr2 153850852 153850989 -96836865 - L2 LINE L2 -25 3247 3111 1631 210 72 20 chr2 153851144 153851535 -96836319 - MLT1D LTR MaLR 0 505 95 339 122 0 0 chr2 153851553 153851602 -96836252 + MLT1D LTR MaLR 89 137 -368 276 221 11 105 chr2 153851599 153851694 -96836160 - MLT1D LTR MaLR -419 86 1 * 1191 193 55 5 chr2 153852927 153853018 -96834836 - AluJo SINE Alu -83 229 144 672 102 0 0 chr2 153853018 153853116 -96834738 + (TA)n Simple_repeat Simple_repeat 1 98 0 1191 193 55 5 chr2 153853116 153853242 -96834612 - AluJo SINE Alu -168 144 1 1704 189 3 0 chr2 153853717 153854003 -96833851 + AluJo SINE Alu 11 297 -15 1618 134 34 0 chr2 153854085 153854323 -96833531 - AluSx SINE Alu -13 299 54 27 29 0 0 chr2 153854654 153854688 -96833166 + AT_rich Low_complexity Low_complexity 1 34 0 1522 112 71 4 chr2 153855417 153855686 -96832168 - AluSq SINE Alu -25 288 2 1800 147 25 0 chr2 153855792 153856071 -96831783 + AluJb SINE Alu 1 286 -26 26 30 0 0 chr2 153857243 153857276 -96830578 + AT_rich Low_complexity Low_complexity 1 33 0 837 174 108 63 chr2 153861459 153861746 -96826108 - L1MC5 LINE L1 -59 7902 7603 2394 81 7 0 chr2 153861788 153862083 -96825771 - AluY SINE Alu -14 297 1 2104 114 7 10 chr2 153862568 153862865 -96824989 + AluSx SINE Alu 1 296 -16 2459 67 6 16 chr2 153863200 153863513 -96824341 - AluSg SINE Alu 0 310 1 1600 213 0 0 chr2 153863728 153864019 -96823835 + AluJb SINE Alu 1 291 -21 2230 92 3 3 chr2 153864027 153864320 -96823534 + AluSc SINE Alu 1 293 -16 225 0 0 0 chr2 153865443 153865468 -96822386 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 26 30 0 0 chr2 153865924 153865957 -96821897 + AT_rich Low_complexity Low_complexity 1 33 0 213 39 0 0 chr2 153866040 153866066 -96821788 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 387 0 0 0 chr2 153866065 153866108 -96821746 + (TG)n Simple_repeat Simple_repeat 1 43 0 282 29 0 0 chr2 153866107 153866142 -96821712 + (GA)n Simple_repeat Simple_repeat 1 35 0 * 2184 112 7 0 chr2 153867538 153867823 -96820031 - AluSq SINE Alu -26 287 1 2017 147 0 0 chr2 153868167 153868467 -96819387 - AluSx SINE Alu -12 300 1 595 186 54 16 chr2 153868712 153868841 -96819013 - Charlie1a DNA MER1_type 0 1455 1322 334 227 0 15 chr2 153868843 153868909 -96818945 + AluJ/FLAM SINE Alu 1 65 -237 * 5059 201 64 8 chr2 153868897 153869989 -96817865 - Charlie1a DNA MER1_type -299 1156 4 2235 102 0 3 chr2 153870611 153870896 -96816958 + AluSx SINE Alu 1 284 -28 2223 147 118 36 chr2 153870968 153871444 -96816410 - MLT2B2 LTR ERVL 0 515 1 288 0 0 0 chr2 153871610 153871642 -96816212 + (T)n Simple_repeat Simple_repeat 1 32 0 2384 100 3 0 chr2 153873493 153873804 -96814050 - AluSx SINE Alu 0 312 1 2298 125 0 0 chr2 153873862 153874174 -96813680 - AluSx SINE Alu 0 312 1 270 252 29 29 chr2 153874179 153874282 -96813572 - MIR SINE MIR -61 147 45 219 299 93 19 chr2 153876181 153876288 -96811566 - MER5A DNA MER1_type -54 135 21 207 329 104 37 chr2 153876427 153876591 -96811263 + MIR3 SINE MIR 19 193 -15 2271 106 0 0 chr2 153876808 153877100 -96810754 - AluSx SINE Alu -20 292 1 224 287 9 70 chr2 153877368 153877483 -96810371 + MER5B DNA MER1_type 4 111 -67 324 102 0 0 chr2 153877489 153877538 -96810316 + (TG)n Simple_repeat Simple_repeat 2 50 0 1659 176 10 21 chr2 153877539 153877829 -96810025 - AluJb SINE Alu -25 287 1 268 258 135 0 chr2 153878188 153878277 -96809577 - L2 LINE L2 -8 3305 3205 801 211 64 0 chr2 153878639 153878795 -96809059 + FRAM SINE Alu 1 165 -11 246 32 0 0 chr2 153879198 153879229 -96808625 + (T)n Simple_repeat Simple_repeat 1 31 0 333 0 0 0 chr2 153879675 153879712 -96808142 + (CA)n Simple_repeat Simple_repeat 2 38 0 240 35 0 0 chr2 153880565 153880594 -96807260 + (A)n Simple_repeat Simple_repeat 1 29 0 364 136 0 25 chr2 153880728 153880809 -96807045 + (TA)n Simple_repeat Simple_repeat 2 80 0 478 278 20 82 chr2 153881059 153881304 -96806550 + MER102b DNA MER1_type 102 331 -10 25 0 0 0 chr2 153881838 153881863 -96805991 + AT_rich Low_complexity Low_complexity 1 25 0 3275 208 42 4 chr2 153882503 153883214 -96804640 - L1MB7 LINE L1 -16 6168 5431 24 32 0 0 chr2 153883230 153883261 -96804593 + AT_rich Low_complexity Low_complexity 1 31 0 2350 80 0 0 chr2 153883263 153883552 -96804302 + AluSg SINE Alu 1 289 -21 2232 89 0 23 chr2 153884454 153884756 -96803098 + AluSx SINE Alu 11 305 -7 1453 213 25 16 chr2 153884764 153885078 -96802776 - Tigger7 DNA MER2_type -2170 317 1 353 294 0 9 chr2 153885986 153886095 -96801759 - MIR SINE MIR -108 154 47 207 269 183 19 chr2 153886203 153886307 -96801547 + MER5A DNA MER1_type 3 123 -66 1989 164 0 0 chr2 153886438 153886737 -96801117 - AluJb SINE Alu -13 299 1 207 162 0 0 chr2 153886816 153886853 -96801001 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 237 353 24 0 chr2 153887293 153887378 -96800476 - L2 LINE L2 -1 3271 3185 8690 98 45 19 chr2 153887418 153887496 -96800358 - HSMAR1 DNA Mariner -1 1286 1211 2241 101 14 3 chr2 153887496 153887793 -96800061 + AluSx SINE Alu 1 300 -12 8690 98 45 19 chr2 153887793 153888963 -96798891 - HSMAR1 DNA Mariner -76 1211 6 306 253 23 0 chr2 153889256 153889343 -96798511 + MIR SINE MIR 65 153 -109 781 250 18 9 chr2 153890900 153891120 -96796734 + AluSg/x SINE Alu 70 291 -19 193 323 16 0 chr2 153891798 153891860 -96795994 - L2 LINE L2 0 3313 3251 2232 107 0 0 chr2 153892507 153892820 -96795034 + AluSg SINE Alu 1 310 0 22 0 0 0 chr2 153894345 153894367 -96793487 + AT_rich Low_complexity Low_complexity 1 22 0 2334 80 0 3 chr2 153894372 153894659 -96793195 - AluSx SINE Alu -9 303 18 317 206 29 0 chr2 153897241 153897309 -96790545 - L1MB7 LINE L1 -751 5370 5301 234 143 0 0 chr2 153897596 153897645 -96790209 + (TCC)n Simple_repeat Simple_repeat 2 50 0 214 191 0 0 chr2 153900858 153900900 -96786954 + T-rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr2 153901828 153901857 -96785997 + AT_rich Low_complexity Low_complexity 1 29 0 210 71 0 0 chr2 153902079 153902107 -96785747 + (TCCCC)n Simple_repeat Simple_repeat 5 32 0 44 0 0 0 chr2 153902281 153902325 -96785529 + AT_rich Low_complexity Low_complexity 1 44 0 2043 136 3 0 chr2 153902325 153902612 -96785242 - AluSx SINE Alu -24 288 1 399 277 17 0 chr2 153906276 153906395 -96781459 + L1ME LINE L1 5532 5652 -469 864 157 13 7 chr2 153907207 153907360 -96780494 - Tigger7 DNA MER2_type -8 2483 2330 253 191 24 83 chr2 153908341 153908375 -96779479 - MIR SINE MIR -4 258 224 1879 158 30 0 chr2 153908375 153908673 -96779181 + AluJb SINE Alu 1 307 -5 253 191 24 83 chr2 153908673 153908722 -96779132 - MIR SINE MIR -38 224 180 1077 184 40 72 chr2 153910467 153910744 -96777110 + AluJb SINE Alu 1 268 -44 485 255 168 6 chr2 153910825 153910986 -96776868 - Charlie8 DNA MER1_type -2134 283 97 556 205 54 0 chr2 153911508 153911620 -96776234 + FLAM_A SINE Alu 8 125 -17 25 51 0 0 chr2 153913790 153913829 -96774025 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 153914826 153914848 -96773006 + AT_rich Low_complexity Low_complexity 1 22 0 249 267 164 6 chr2 153914915 153915072 -96772782 - MIR SINE MIR -67 141 10 1548 205 32 0 chr2 153915524 153915807 -96772047 - AluJb SINE Alu -20 292 1 21 36 0 0 chr2 153916159 153916187 -96771667 + AT_rich Low_complexity Low_complexity 1 28 0 382 209 114 19 chr2 153917046 153917151 -96770703 - L2 LINE L2 -3 3310 3196 23 54 0 0 chr2 153917487 153917524 -96770330 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 153919610 153919638 -96768216 + AT_rich Low_complexity Low_complexity 1 28 0 2162 97 3 3 chr2 153921033 153921323 -96766531 - AluSg SINE Alu -20 290 1 256 272 22 33 chr2 153922924 153923016 -96764838 + MER5B DNA MER1_type 86 176 -2 225 180 0 0 chr2 153923075 153923125 -96764729 + (CA)n Simple_repeat Simple_repeat 2 51 0 2314 108 0 0 chr2 153924027 153924332 -96763522 - AluSx SINE Alu -7 305 1 2471 63 3 0 chr2 153924339 153924640 -96763214 - AluY SINE Alu -9 302 1 387 305 172 0 chr2 153925318 153925469 -96762385 - MER5A DNA MER1_type 0 189 13 1006 202 103 79 chr2 153925488 153925780 -96762074 + AluJo SINE Alu 1 299 -3 337 248 271 70 chr2 153926001 153926215 -96761639 + MIR SINE MIR 1 257 -5 2179 105 0 13 chr2 153926261 153926567 -96761287 - AluSx SINE Alu -8 304 3 26 64 0 0 chr2 153927317 153927364 -96760490 + AT_rich Low_complexity Low_complexity 1 47 0 25 31 0 0 chr2 153927379 153927411 -96760443 + AT_rich Low_complexity Low_complexity 1 32 0 917 88 196 0 chr2 153927696 153927844 -96760010 - MER30 DNA MER1_type 0 230 54 1521 132 112 0 chr2 153929278 153929536 -96758318 + MER1B DNA MER1_type 53 339 0 696 197 129 25 chr2 153929590 153929787 -96758067 + MER33 DNA MER1_type 1 209 -88 535 165 6 153 chr2 153930458 153930634 -96757220 - MER20 DNA MER1_type -13 206 57 621 269 20 13 chr2 153931079 153931228 -96756626 - MER5A DNA MER1_type -28 161 12 398 268 0 92 chr2 153931894 153932036 -96755818 + MLT1J LTR MaLR 30 195 -288 594 214 103 0 chr2 153932141 153932267 -96755587 + MER5A DNA MER1_type 1 139 -50 1775 141 13 46 chr2 153932419 153932723 -96755131 - AluJb SINE Alu -18 294 1 245 157 59 0 chr2 153932733 153932784 -96755070 + MER5A DNA MER1_type 136 189 0 547 294 105 34 chr2 153932878 153933116 -96754738 + MIR SINE MIR 7 261 -1 886 115 0 0 chr2 153933817 153933930 -96753924 + FLAM_C SINE Alu 5 117 -26 216 0 0 0 chr2 153933930 153933954 -96753900 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 31 68 0 0 chr2 153935813 153935872 -96751982 + AT_rich Low_complexity Low_complexity 1 59 0 208 0 62 0 chr2 153935941 153935973 -96751881 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1866 140 19 32 chr2 153936333 153936647 -96751207 - AluJb SINE Alu -2 310 1 27 96 0 0 chr2 153937138 153937221 -96750633 + AT_rich Low_complexity Low_complexity 1 83 0 22 35 0 0 chr2 153937474 153937503 -96750351 + AT_rich Low_complexity Low_complexity 1 29 0 485 325 62 5 chr2 153938529 153938738 -96749116 + MER58A DNA MER1_type 4 224 0 303 301 68 20 chr2 153939699 153939845 -96748009 - L1MC/D LINE L1 -2319 5489 5337 315 211 0 0 chr2 153939851 153939908 -96747946 + AluS SINE Alu 1 57 -245 1121 130 6 17 chr2 153939909 153940086 -96747768 + AluJb SINE Alu 132 306 -6 1693 154 48 11 chr2 153940088 153940360 -96747494 - AluJo SINE Alu -30 282 1 549 192 39 0 chr2 153940473 153940603 -96747251 - MER96B DNA MER1_type? -241 176 42 288 53 0 0 chr2 153941064 153941102 -96746752 + (CTG)n Simple_repeat Simple_repeat 3 40 0 22 0 0 0 chr2 153942573 153942595 -96745259 + AT_rich Low_complexity Low_complexity 1 22 0 813 251 95 48 chr2 153993561 153994058 -96693796 - pTR5 LTR ERV1 -1178 1260 741 583 101 0 0 chr2 153994055 153994144 -96693710 - LTR23-int LTR ERV1 -2229 4102 4014 * 677 199 60 35 chr2 153994154 153994538 -96693316 - LTR23-int LTR ERV1 -1950 2930 1925 2792 170 38 95 chr2 153994768 153995155 -96692699 - LTR23-int LTR ERV1 -2878 3453 3045 5061 151 7 102 chr2 153995155 153996051 -96691803 - L1PA16 LINE L1 -2 6164 5280 2792 170 38 95 chr2 153996051 153996221 -96691633 - LTR23-int LTR ERV1 -3286 3045 2953 2007 120 7 23 chr2 153996221 153996522 -96691332 + AluSx SINE Alu 2 297 -15 2792 170 38 95 chr2 153996522 153996761 -96691093 - LTR23-int LTR ERV1 -3378 2953 2702 2106 199 29 52 chr2 153996765 153997081 -96690773 - L1 LINE L1 -2144 4002 3707 1265 201 19 19 chr2 153997081 153997394 -96690460 - AluSq SINE Alu 0 313 1 2106 199 29 52 chr2 153997394 153997725 -96690129 - L1 LINE L1 -2439 3707 3370 1943 141 16 16 chr2 153998175 153998479 -96689375 - AluSq SINE Alu -9 304 1 12293 177 21 77 chr2 153998479 153999786 -96688068 - L1 LINE L1 -2449 4399 3020 2489 84 0 0 chr2 153999786 154000094 -96687760 - AluY SINE Alu -3 308 1 12293 177 21 77 chr2 154000094 154000339 -96687515 - L1 LINE L1 -3828 3020 2763 2112 138 3 3 chr2 154000339 154000643 -96687211 - AluSq SINE Alu -9 304 1 12293 177 21 77 chr2 154000643 154000761 -96687093 - L1 LINE L1 -4085 2763 2640 1887 146 14 14 chr2 154000761 154001056 -96686798 - AluJb SINE Alu -17 295 1 12293 177 21 77 chr2 154001056 154003731 -96684123 - L1 LINE L1 -4208 2640 324 4645 107 14 30 chr2 154003731 154003895 -96683959 + LTR8 LTR ERV1 4 169 -522 1820 129 28 3 chr2 154003895 154004181 -96683673 + AluSx SINE Alu 19 311 -1 4645 107 14 30 chr2 154004181 154004715 -96683139 + LTR8 LTR ERV1 169 691 0 12293 177 21 77 chr2 154004715 154005020 -96682834 - L1 LINE L1 -6524 324 3 324 310 77 43 chr2 154005054 154005448 -96682406 - L1M4 LINE L1 -1548 4598 4176 745 278 76 55 chr2 154005448 154005959 -96681895 - LTR33A LTR ERVL 0 523 2 324 310 77 43 chr2 154005959 154006148 -96681706 - L1M4 LINE L1 -1970 4176 3995 25 0 0 0 chr2 154006149 154006174 -96681680 + AT_rich Low_complexity Low_complexity 1 25 0 818 158 0 0 chr2 154006303 154006436 -96681418 - AluJb SINE Alu 0 312 180 214 327 113 7 chr2 154006840 154006990 -96680864 + MIR SINE MIR 65 230 -32 204 311 144 0 chr2 154007028 154007118 -96680736 + MIR SINE MIR 38 140 -68 280 343 147 0 chr2 154007167 154007310 -96680544 - MIR SINE MIR -79 183 20 299 325 49 0 chr2 154008177 154008300 -96679554 + MER94 DNA DNA 4 132 -2 2225 116 10 6 chr2 154009413 154009724 -96678130 - AluSx SINE Alu 0 312 1 1370 199 37 43 chr2 154009892 154010089 -96677765 - MLT1A2 LTR MaLR 0 374 178 258 32 0 0 chr2 154010089 154010120 -96677734 + (TA)n Simple_repeat Simple_repeat 2 32 0 1370 199 37 43 chr2 154010120 154010298 -96677556 - MLT1A2 LTR MaLR -196 178 1 1653 271 58 9 chr2 154010597 154011180 -96676674 + MER20B DNA MER1_type 23 634 -149 339 208 73 0 chr2 154011182 154011239 -96676615 + MER53 DNA DNA 1 69 -120 2333 97 0 22 chr2 154011239 154011550 -96676304 + AluSx SINE Alu 1 304 -8 339 208 73 0 chr2 154011550 154011588 -96676266 + MER53 DNA DNA 69 103 -86 838 207 5 83 chr2 154012008 154012225 -96675629 - MLT1A1 LTR MaLR 0 365 166 446 275 123 52 chr2 154012568 154012892 -96674962 + L2 LINE L2 2710 3082 -190 200 342 162 0 chr2 154013085 154013202 -96674652 + L2 LINE L2 3134 3269 -3 385 248 28 73 chr2 154013347 154013456 -96674398 - L2 LINE L2 0 3272 3169 377 268 41 0 chr2 154013553 154013676 -96674178 + Charlie7 DNA MER1_type 258 385 -2227 1183 194 0 16 chr2 154014214 154014461 -96673393 + Charlie7 DNA MER1_type 391 633 -1979 2442 86 0 3 chr2 154014475 154014776 -96673078 + AluY SINE Alu 1 300 -11 337 63 35 0 chr2 154015096 154015208 -96672646 + MADE1 DNA Mariner 1 80 0 2543 133 41 12 chr2 154015232 154015645 -96672209 - MSTA LTR MaLR -3 425 1 382 358 24 36 chr2 154015731 154015896 -96671958 + MER5B DNA MER1_type 2 164 -14 299 235 0 98 chr2 154015958 154016060 -96671794 + MER5A DNA MER1_type 20 111 -78 223 341 56 0 chr2 154016115 154016241 -96671613 - MIR SINE MIR -27 235 103 201 308 0 15 chr2 154016288 154016353 -96671501 - MER5B DNA MER1_type -113 65 2 393 269 50 28 chr2 154017223 154017364 -96670490 + Charlie8 DNA MER1_type 46 189 -2228 2211 124 3 3 chr2 154017535 154017842 -96670012 + AluSg SINE Alu 1 307 -3 236 295 53 11 chr2 154017877 154017972 -96669882 - MIR SINE MIR -68 140 42 209 321 18 0 chr2 154018763 154018875 -96668979 + (TA)n Simple_repeat Simple_repeat 1 114 0 440 235 113 52 chr2 154018933 154019048 -96668806 + FLAM_A SINE Alu 2 123 -10 1003 234 23 9 chr2 154019130 154019348 -96668506 + MIR SINE MIR 4 224 -38 295 262 0 105 chr2 154020105 154020277 -96667577 - L1ME2 LINE L1 -107 6126 5973 1050 190 24 4 chr2 154020281 154020534 -96667320 - L1ME2 LINE L1 -746 5469 5212 529 282 19 33 chr2 154020539 154020749 -96667105 - MLT1G1 LTR MaLR -389 206 3 1316 242 31 56 chr2 154020762 154021366 -96666488 - L1ME2 LINE L1 -2742 3473 2885 4430 205 37 15 chr2 154021370 154022882 -96664972 - L1MB5 LINE L1 -8 6166 4689 1697 140 79 11 chr2 154022882 154023161 -96664693 - AluSg SINE Alu -12 298 1 4430 205 37 15 chr2 154023161 154023277 -96664577 - L1MB5 LINE L1 -1485 4689 4577 1605 191 85 15 chr2 154023277 154023617 -96664237 - MLT1A1 LTR MaLR 0 365 2 4430 205 37 15 chr2 154023617 154023872 -96663982 - L1MB5 LINE L1 -1597 4577 3952 2009 151 3 0 chr2 154023891 154024189 -96663665 - AluJb SINE Alu -13 299 1 1736 253 38 24 chr2 154024191 154024920 -96662934 - L1ME2 LINE L1 -3328 2887 2183 1214 290 120 59 chr2 154024930 154025197 -96662657 - L1ME2 LINE L1 -4293 2103 1854 2043 158 0 0 chr2 154025197 154025508 -96662346 + AluSx SINE Alu 1 311 -1 1214 290 120 59 chr2 154025508 154025709 -96662145 - L1ME2 LINE L1 -4542 1854 1667 246 163 0 0 chr2 154025709 154025752 -96662102 - Alu SINE Alu -15 287 245 1214 290 120 59 chr2 154025752 154026092 -96661762 - L1ME2 LINE L1 -4729 1667 1349 2275 95 7 0 chr2 154026092 154026388 -96661466 - AluSp SINE Alu -15 298 1 1214 290 120 59 chr2 154026388 154027464 -96660390 - L1ME2 LINE L1 -5047 1349 57 25 0 0 0 chr2 154027474 154027499 -96660355 + AT_rich Low_complexity Low_complexity 1 25 0 965 125 23 69 chr2 154027557 154027773 -96660081 - L1MD3 LINE L1 0 7995 7790 4333 58 36 0 chr2 154027775 154028363 -96659491 + L1PA7 LINE L1 5526 6134 -20 2302 71 3 7 chr2 154028376 154028672 -96659182 + AluY SINE Alu 1 295 -16 317 167 107 0 chr2 154028673 154028757 -96659097 - L1MC3 LINE L1 -194 7591 7499 26 0 0 0 chr2 154028829 154028855 -96658999 + AT_rich Low_complexity Low_complexity 1 26 0 5817 104 12 5 chr2 154028862 154029784 -96658070 - L1PB3 LINE L1 -1 6153 5227 317 299 21 49 chr2 154030194 154030338 -96657516 + MLT1K LTR MaLR 200 339 -249 9786 183 32 22 chr2 154030611 154033175 -96654679 - L1M2 LINE L1 -743 5403 2923 1085 257 79 83 chr2 154033195 154033740 -96654114 + MER45C DNA AcHobo 54 596 -357 325 137 0 0 chr2 154033766 154033817 -96654037 + MER45C DNA AcHobo 901 951 -2 21 36 0 0 chr2 154034072 154034100 -96653754 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 154034114 154034139 -96653715 + AT_rich Low_complexity Low_complexity 1 25 0 620 276 29 58 chr2 154034407 154034800 -96653054 + L1M2 LINE L1 5340 5715 -576 721 162 0 0 chr2 154034961 154035078 -96652776 - FLAM_C SINE Alu -25 118 2 310 243 86 0 chr2 154035494 154035564 -96652290 - MIR SINE MIR -158 104 29 330 283 23 68 chr2 154035820 154035885 -96651969 - MER5B DNA MER1_type 0 178 112 1727 169 10 19 chr2 154035885 154036193 -96651661 + AluJo SINE Alu 1 305 -7 330 283 23 68 chr2 154036193 154036304 -96651550 - MER5B DNA MER1_type -66 112 10 947 179 27 0 chr2 154036386 154036570 -96651284 - MER5A DNA MER1_type 0 189 1 1727 169 61 6 chr2 154037422 154037766 -96650088 - L1PB3 LINE L1 -2 6868 6506 292 125 0 0 chr2 154037766 154037814 -96650040 + L1P LINE L1 4889 4936 -1210 * 9109 191 10 20 chr2 154037812 154039443 -96648411 - L1PB3 LINE L1 -1230 5632 4027 1583 146 9 117 chr2 154039443 154039793 -96648061 - AluSx SINE Alu 0 312 1 9109 191 10 20 chr2 154039793 154040336 -96647518 - L1PB3 LINE L1 -2835 4027 3480 210 241 0 35 chr2 154040956 154041014 -96646840 + CT-rich Low_complexity Low_complexity 1 56 0 3640 270 24 44 chr2 154041023 154042799 -96645055 - L1PB3 LINE L1 -5219 1644 37 1337 256 86 0 chr2 154042914 154043321 -96644533 + L1MEc LINE L1 74 515 -5881 5590 155 7 25 chr2 154043651 154045699 -96642155 - L1PA13 LINE L1 -7 6156 4149 245 366 55 25 chr2 154045755 154045957 -96641897 + MIR SINE MIR 1 208 -54 1411 196 95 7 chr2 154046417 154046850 -96641004 - Charlie4a DNA MER1_type -8 500 30 1581 213 0 23 chr2 154046871 154047172 -96640682 - AluJo SINE Alu -12 300 7 379 252 40 40 chr2 154047818 154047969 -96639885 + MER112 DNA MER1_type 105 255 -5 255 59 39 20 chr2 154048127 154048178 -96639676 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 1972 143 0 0 chr2 154048180 154048460 -96639394 - AluSx SINE Alu -32 280 1 232 182 0 55 chr2 154049140 154049195 -96638659 + MER112 DNA MER1_type 28 79 -181 3625 133 14 100 chr2 154050034 154050757 -96637097 - LTR8 LTR ERV1 -30 661 1 1114 159 0 21 chr2 154050758 154050947 -96636907 + MLT1A1 LTR MaLR 175 359 -6 2787 124 34 23 chr2 154051249 154051692 -96636162 - MER83 LTR ERV1 0 448 1 306 244 0 49 chr2 154051696 154051778 -96636076 + MER34 LTR ERV1 1 78 -464 378 244 33 0 chr2 154051793 154051883 -96635971 + LTR29 LTR ERV1 137 229 -393 338 259 26 35 chr2 154052322 154052438 -96635416 + LTR67 LTR ERVL 431 545 -12 3682 208 21 47 chr2 154052650 154053645 -96634209 - LTR5 LTR ERVK 0 969 1 1635 198 0 23 chr2 154053681 154053984 -96633870 - AluJb SINE Alu -16 296 1 2114 98 44 3 chr2 154054213 154054510 -96633344 + AluSx SINE Alu 1 309 -3 22 0 0 0 chr2 154054647 154054669 -96633185 + AT_rich Low_complexity Low_complexity 1 22 0 1004 161 17 17 chr2 154055153 154055170 -96632684 + MER2 DNA MER2_type 32 48 -297 261 0 0 0 chr2 154055170 154055199 -96632655 + (CCCCAA)n Simple_repeat Simple_repeat 1 29 0 1004 161 17 17 chr2 154055199 154055355 -96632499 + MER2 DNA MER2_type 47 205 -140 2345 97 0 3 chr2 154056302 154056612 -96631242 + AluSg SINE Alu 1 309 -1 22 0 0 0 chr2 154056635 154056657 -96631197 + AT_rich Low_complexity Low_complexity 1 22 0 1738 181 7 0 chr2 154057333 154057621 -96630233 - AluJo SINE Alu -22 290 1 347 265 219 43 chr2 154058071 154058350 -96629504 + L1ME4a LINE L1 5576 5903 -218 298 275 116 7 chr2 154058357 154058495 -96629359 + L1ME4a LINE L1 5946 6098 -23 181 177 81 32 chr2 154058512 154058574 -96629280 + MIR SINE MIR 128 192 -70 581 243 34 42 chr2 154058710 154058900 -96628954 + L1MC4a LINE L1 5658 5843 -303 755 171 0 55 chr2 154059217 154059363 -96628491 + FLAM_C SINE Alu 5 142 -1 958 212 17 11 chr2 154059594 154059773 -96628081 + MER77 LTR ERV1 280 459 -146 308 133 17 0 chr2 154060002 154060062 -96627792 + GA-rich Low_complexity Low_complexity 2 62 0 766 186 45 45 chr2 154060302 154060479 -96627375 + MER5B DNA MER1_type 2 178 0 261 0 0 0 chr2 154060530 154060559 -96627295 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2020 141 3 6 chr2 154060584 154060897 -96626957 - AluJb SINE Alu 0 312 1 216 200 0 0 chr2 154060898 154060943 -96626911 + T-rich Low_complexity Low_complexity 1 45 0 223 324 76 29 chr2 154061358 154061463 -96626391 - L2 LINE L2 -1 3312 3203 1555 35 0 0 chr2 154061629 154061803 -96626051 + L1PA4 LINE L1 5977 6150 -5 2321 76 3 16 chr2 154062268 154062571 -96625283 + AluY SINE Alu 1 299 -12 1423 130 100 50 chr2 154062642 154062971 -96624883 - MLT2C1 LTR ERVL -65 349 1 450 125 0 0 chr2 154062971 154063043 -96624811 - Ricksha DNA DNA -2900 346 275 3907 143 57 32 chr2 154063249 154063756 -96624098 - L1MA9 LINE L1 -1 6311 5818 342 0 0 0 chr2 154063756 154063794 -96624060 + (CA)n Simple_repeat Simple_repeat 1 38 0 3907 143 57 32 chr2 154063794 154063829 -96624025 - L1MA9 LINE L1 -494 5818 5785 2143 137 35 30 chr2 154063829 154064202 -96623652 - THE1C LTR MaLR 0 375 1 3907 143 57 32 chr2 154064202 154064378 -96623476 - L1MA9 LINE L1 -527 5785 5574 1222 172 158 7 chr2 154064379 154064658 -96623196 - ERVL-C1 LTR ERVL -172 5592 5272 * 3462 154 18 4 chr2 154064652 154065210 -96622644 - ERVL-C1 LTR ERVL -1144 4620 4055 1340 168 55 11 chr2 154065203 154065477 -96622377 - ERVL LTR ERVL -4410 1354 1069 * 2481 220 65 38 chr2 154065573 154066154 -96621700 + MER77 LTR ERV1 9 605 0 2272 95 20 0 chr2 154066213 154066507 -96621347 + AluSx SINE Alu 1 300 -12 716 161 16 16 chr2 154066660 154066784 -96621070 - FLAM_A SINE Alu -9 124 1 483 160 0 0 chr2 154066839 154066914 -96620940 - AluSx SINE Alu -17 292 218 1234 111 12 0 chr2 154066914 154067086 -96620768 - AluSx SINE Alu -124 188 15 1488 294 19 28 chr2 154067152 154067618 -96620236 + LTR16B LTR ERVL 1 462 -2 240 261 39 78 chr2 154067622 154067641 -96620213 - L1MC/D LINE L1 -1911 5897 5879 686 272 91 40 chr2 154067641 154068038 -96619816 - L1ME2 LINE L1 -280 5884 5468 614 188 70 65 chr2 154068046 154068232 -96619622 + L1MB7 LINE L1 5722 5908 -270 237 139 0 0 chr2 154068905 154068948 -96618906 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 2027 123 55 76 chr2 154069272 154069655 -96618199 - THE1C LTR MaLR 0 375 1 6690 121 43 13 chr2 154069655 154070664 -96617190 - THE1C-int LTR MaLR 0 1580 542 1809 138 9 22 chr2 154070664 154071013 -96616841 - MER4A LTR ERV1 0 664 262 571 155 0 10 chr2 154071014 154071111 -96616743 - MER4A LTR ERV1 -567 97 2 3045 130 90 4 chr2 154071112 154071613 -96616241 - THE1C-int LTR MaLR -1035 545 2 1775 149 117 20 chr2 154071614 154071956 -96615898 - THE1C LTR MaLR 0 375 1 352 257 76 19 chr2 154072678 154072783 -96615071 - L2 LINE L2 -1 3312 3202 22 0 0 0 chr2 154072840 154072862 -96614992 + AT_rich Low_complexity Low_complexity 1 22 0 192 271 104 0 chr2 154073100 154073148 -96614706 - L2 LINE L2 -11 3261 3209 808 179 0 0 chr2 154073188 154073322 -96614532 + FRAM SINE Alu 38 171 -5 368 325 57 6 chr2 154073323 154073480 -96614374 - MIR SINE MIR -95 167 3 2329 56 0 14 chr2 154073515 154073840 -96614014 + AluY SINE Alu 1 321 0 1288 142 36 36 chr2 154074130 154074330 -96613524 - AluJb SINE Alu -6 306 104 4295 112 90 47 chr2 154074330 154075082 -96612772 + LTR1 LTR ERV1 1 785 0 1288 142 36 36 chr2 154075082 154075106 -96612748 - AluJb SINE Alu -207 105 82 32 43 0 0 chr2 154075174 154075220 -96612634 + AT_rich Low_complexity Low_complexity 1 46 0 1367 228 196 58 chr2 154075644 154076281 -96611573 + MER50 LTR ERV1 10 734 0 408 206 54 0 chr2 154076306 154076398 -96611456 - MIR SINE MIR -72 136 40 237 293 65 49 chr2 154076763 154076808 -96611046 - MIR3 SINE MIR -33 175 132 5029 81 51 2 chr2 154076808 154077437 -96610417 + PABL_A LTR ERV1 1 660 0 237 293 65 49 chr2 154077437 154077514 -96610340 - MIR3 SINE MIR -76 132 51 1011 127 41 118 chr2 154078411 154078551 -96609303 - MER7A DNA MER2_type -2835 203 87 2338 82 0 0 chr2 154078551 154078842 -96609012 - AluSg SINE Alu -19 291 1 1011 127 41 118 chr2 154078842 154078922 -96608932 - MER7A DNA MER2_type -2951 87 2 2406 59 0 26 chr2 154079164 154079468 -96608386 - AluY SINE Alu 0 311 16 1424 165 59 22 chr2 154080227 154080548 -96607306 + LTR37A LTR ERV1 92 424 -2 240 309 71 40 chr2 154080976 154081036 -96606818 - L2 LINE L2 -6 3266 3209 823 231 136 69 chr2 154081036 154081559 -96606295 + MER34B LTR ERV1 5 562 -3 240 309 71 40 chr2 154081559 154081624 -96606230 - L2 LINE L2 -63 3209 3137 3439 154 16 2 chr2 154081653 154082205 -96605649 - LTR24B LTR ERV1 -7 569 10 282 120 0 20 chr2 154082283 154082333 -96605521 - L2 LINE L2 -208 3064 3016 2078 114 0 7 chr2 154082600 154082912 -96604942 + AluSp SINE Alu 1 313 0 570 315 122 3 chr2 154083705 154084026 -96603828 - LTR16A LTR ERVL 0 450 92 208 293 17 17 chr2 154084076 154084134 -96603720 - MIR SINE MIR -122 86 29 573 281 12 69 chr2 154084148 154084394 -96603460 - L2 LINE L2 -1 3312 3081 1367 133 5 0 chr2 154084442 154084669 -96603185 + AluJo SINE Alu 86 313 0 442 307 40 0 chr2 154084671 154084821 -96603033 - L2 LINE L2 -252 3061 2906 376 248 71 14 chr2 154084882 154085020 -96602834 + MER113 DNA MER1_type? 1 146 -375 2074 157 19 53 chr2 154085020 154085397 -96602457 - MER89 LTR ERV1 0 559 196 23 33 0 0 chr2 154085467 154085497 -96602357 + AT_rich Low_complexity Low_complexity 1 30 0 881 182 13 0 chr2 154085500 154085654 -96602200 + AluSg/x SINE Alu 132 287 -23 734 121 13 141 chr2 154085654 154085803 -96602051 - AluJo/FLAM SINE Alu -172 130 1 3346 104 0 7 chr2 154085867 154086317 -96601537 - L1PA13 LINE L1 -11 6152 5706 788 187 81 30 chr2 154086317 154086515 -96601339 - MER89 LTR ERV1 -351 208 1 230 106 21 0 chr2 154086601 154086648 -96601206 + (CA)n Simple_repeat Simple_repeat 1 48 0 250 381 25 8 chr2 154087271 154087389 -96600465 + L2 LINE L2 3136 3255 -17 1385 226 15 48 chr2 154089164 154089562 -96598292 - MLT2C1 LTR ERVL 0 397 13 319 326 35 85 chr2 154089922 154090180 -96597674 + MIR SINE MIR 2 246 -16 225 0 0 0 chr2 154090258 154090283 -96597571 + (A)n Simple_repeat Simple_repeat 1 25 0 191 380 0 0 chr2 154091405 154091476 -96596378 - L2 LINE L2 -646 2668 2598 268 279 148 33 chr2 154091509 154091631 -96596223 - L2 LINE L2 0 3272 3137 312 285 163 29 chr2 154091712 154091884 -96595970 + MIR SINE MIR 37 231 -31 565 186 27 137 chr2 154093432 154093615 -96594239 - LTR33A LTR ERVL -355 168 6 1814 87 0 0 chr2 154094006 154094236 -96593618 + AluSg/x SINE Alu 80 309 -1 667 313 99 10 chr2 154094409 154094722 -96593132 - L3 LINE CR1 -103 1474 1134 198 316 89 77 chr2 154094772 154094940 -96592914 + L2 LINE L2 3017 3186 -86 2208 102 0 0 chr2 154095192 154095476 -96592378 + AluSx SINE Alu 27 310 -2 212 320 100 47 chr2 154095601 154095751 -96592103 + MIR SINE MIR 89 246 -16 228 146 0 171 chr2 154095909 154095991 -96591863 + MER3 DNA MER1_type 21 88 -121 * 791 144 134 37 chr2 154095954 154096022 -96591832 - MER3 DNA MER1_type -4 205 145 771 210 0 0 chr2 154096022 154096146 -96591708 + FLAM_A SINE Alu 1 124 -9 791 144 134 37 chr2 154096146 154096264 -96591590 - MER3 DNA MER1_type -64 145 1 298 307 97 0 chr2 154096320 154096434 -96591420 - L3 LINE CR1 -545 1032 908 814 191 74 48 chr2 154096485 154096674 -96591180 - MER58A DNA MER1_type 0 224 31 1888 183 83 6 chr2 154096686 154097025 -96590829 - MLT1A1 LTR MaLR 0 365 1 511 260 183 6 chr2 154097264 154097433 -96590421 - MIR SINE MIR -21 241 43 1342 302 105 56 chr2 154097706 154098994 -96588860 + L2 LINE L2 1912 3267 -5 186 43 0 0 chr2 154101822 154101845 -96586009 + (CA)n Simple_repeat Simple_repeat 2 24 0 313 230 124 9 chr2 154101864 154101977 -96585877 + MIR SINE MIR 116 241 -21 1111 160 9 22 chr2 154102126 154102357 -96585497 + L1MA9 LINE L1 6085 6312 0 2123 168 68 0 chr2 154103059 154103458 -96584396 - MSTB LTR MaLR 0 426 1 181 367 38 0 chr2 154103548 154103627 -96584227 + L2 LINE L2 328 409 -2905 2148 207 19 58 chr2 154103704 154104240 -96583614 + LTR40a LTR ERVL 1 515 -4 2264 249 81 45 chr2 154104248 154104316 -96583538 - MER69B DNA AcHobo -1489 1037 973 7450 141 26 17 chr2 154104316 154105603 -96582251 - HSMAR2 DNA Mariner 0 1302 4 2264 249 81 45 chr2 154105603 154106496 -96581358 - MER69B DNA AcHobo -1553 973 41 421 173 0 60 chr2 154107190 154107323 -96580531 - L1MA4 LINE L1 0 6300 6176 432 193 0 127 chr2 154107345 154107526 -96580328 - L1MA4 LINE L1 -114 6186 6029 2411 81 0 0 chr2 154107528 154107837 -96580017 - AluY SINE Alu -2 309 1 316 313 156 6 chr2 154107930 154108109 -96579745 - MIR SINE MIR -13 249 44 195 122 61 0 chr2 154108429 154108478 -96579376 + CT-rich Low_complexity Low_complexity 2 53 0 413 292 88 6 chr2 154108867 154109038 -96578816 + MIR SINE MIR 22 206 -56 1244 27 0 0 chr2 154109051 154109197 -96578657 + L1PA3 LINE L1 6005 6150 -5 26 0 0 0 chr2 154109198 154109224 -96578630 + AT_rich Low_complexity Low_complexity 1 26 0 206 327 64 6 chr2 154110596 154110752 -96577102 + L2 LINE L2 2689 2853 -461 362 298 51 44 chr2 154111211 154111369 -96576485 - L2 LINE L2 -4 3309 3151 529 356 142 3 chr2 154111498 154111821 -96576033 - L2 LINE L2 -345 2969 2602 297 51 0 0 chr2 154111844 154111883 -96575971 + (ATG)n Simple_repeat Simple_repeat 1 39 0 29 0 0 0 chr2 154111915 154111944 -96575910 + AT_rich Low_complexity Low_complexity 1 29 0 2948 28 3 3 chr2 154111944 154112298 -96575556 - L1PA4 LINE L1 -3 6152 5799 28 0 0 0 chr2 154112835 154112863 -96574991 + AT_rich Low_complexity Low_complexity 1 28 0 1952 157 0 3 chr2 154113568 154113874 -96573980 - AluJo SINE Alu -2 310 6 1291 253 127 32 chr2 154113944 154114541 -96573313 + L1ME2 LINE L1 5510 6163 -1 2273 92 0 20 chr2 154114552 154114857 -96572997 + AluSc SINE Alu 1 299 -10 181 318 76 0 chr2 154115449 154115515 -96572339 + L2 LINE L2 1134 1204 -2110 2297 98 3 0 chr2 154115718 154116015 -96571839 - AluSq SINE Alu -15 298 1 669 271 53 44 chr2 154116067 154116292 -96571562 + MIR SINE MIR 26 252 -10 25 51 0 0 chr2 154117080 154117119 -96570735 + AT_rich Low_complexity Low_complexity 1 39 0 1529 207 3 10 chr2 154117165 154117470 -96570384 - AluSx SINE Alu -7 305 3 30052 107 12 60 chr2 154117902 154124374 -96563480 + L1PA7 LINE L1 2 6152 -2 255 300 54 31 chr2 154124970 154125100 -96562754 - L2 LINE L2 -175 3138 3006 398 176 0 0 chr2 154125836 154125904 -96561950 - MER45B DNA AcHobo -413 627 560 273 152 206 33 chr2 154126060 154126152 -96561702 + MLT1F LTR MaLR 334 441 -101 253 216 0 0 chr2 154126480 154126531 -96561323 - Charlie8 DNA MER1_type -989 1428 1378 2008 174 14 38 chr2 154126586 154127010 -96560844 + L1M3 LINE L1 5202 5614 -569 1791 171 0 23 chr2 154127010 154127314 -96560540 + AluJo SINE Alu 3 299 -13 2008 174 14 38 chr2 154127314 154127389 -96560465 + L1M3 LINE L1 5614 5689 -494 1848 186 20 0 chr2 154127391 154127741 -96560113 - MLT1A1 LTR MaLR -8 357 1 221 125 0 42 chr2 154128336 154128384 -96559470 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 8516 229 25 30 chr2 154130193 154131077 -96556777 - L1MC1 LINE L1 -18 6595 5709 1640 150 8 8 chr2 154131077 154131330 -96556524 - AluSq SINE Alu -20 293 41 8516 229 25 30 chr2 154131330 154132098 -96555756 - L1MC1 LINE L1 -904 5709 4939 2288 160 57 5 chr2 154132098 154132505 -96555349 + MSTA LTR MaLR 1 428 0 8516 229 25 30 chr2 154132505 154133986 -96553868 - L1MC1 LINE L1 -1674 4939 3453 5347 119 26 32 chr2 154133986 154134304 -96553550 + L1PA15 LINE L1 4384 4702 -1463 186 71 0 0 chr2 154134304 154134332 -96553522 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 5347 119 26 32 chr2 154134332 154134752 -96553102 + L1PA15 LINE L1 4702 5123 -1042 2122 135 0 3 chr2 154134752 154135048 -96552806 - AluSg SINE Alu -11 299 5 5347 119 26 32 chr2 154135048 154136094 -96551760 + L1PA15 LINE L1 5123 6152 -13 8516 229 25 30 chr2 154136094 154137110 -96550744 - L1MC1 LINE L1 -3160 3453 2463 363 221 83 2 chr2 154137110 154137199 -96550655 - AluJ/FLAM SINE Alu -217 85 3 2129 137 79 51 chr2 154137200 154138290 -96549564 - L1MC1 LINE L1 -3971 2455 1397 261 57 0 0 chr2 154138290 154138325 -96549529 + (CA)n Simple_repeat Simple_repeat 2 36 0 2129 137 79 51 chr2 154138325 154139547 -96548307 - L1MC1 LINE L1 -5029 1397 32 1376 199 5 93 chr2 154139674 154140041 -96547813 + MLT1A1 LTR MaLR 31 365 0 6955 198 26 53 chr2 154140045 154141717 -96546137 + MLT1A1-int LTR MaLR 5 1729 -6 1173 142 42 61 chr2 154141722 154142026 -96545828 + MLT1A1 LTR MaLR 1 399 -27 234 62 0 0 chr2 154142911 154142943 -96544911 + (TCCCC)n Simple_repeat Simple_repeat 2 33 0 189 214 0 0 chr2 154142938 154142980 -96544874 + CT-rich Low_complexity Low_complexity 2 43 0 * 1930 145 86 6 chr2 154144040 154144378 -96543476 - MLT1A1 LTR MaLR 0 365 1 313 307 0 0 chr2 154145409 154145497 -96542357 + CT-rich Low_complexity Low_complexity 1 88 0 412 216 18 29 chr2 154145731 154145902 -96541952 + CT-rich Low_complexity Low_complexity 1 169 0 214 150 17 17 chr2 154146432 154146492 -96541362 + (CCTTG)n Simple_repeat Simple_repeat 2 61 0 209 129 0 57 chr2 154146479 154146549 -96541305 + (TTCC)n Simple_repeat Simple_repeat 1 66 0 * 511 78 22 11 chr2 154146568 154146658 -96541196 + (TTCCC)n Simple_repeat Simple_repeat 2 92 0 1642 153 3 58 chr2 154146663 154146958 -96540896 - AluJo SINE Alu -33 279 1 720 273 72 12 chr2 154146983 154147377 -96540477 + MLT1K LTR MaLR 81 564 -24 1005 86 0 0 chr2 154148625 154148788 -96539066 + (TA)n Simple_repeat Simple_repeat 2 164 0 1023 264 97 17 chr2 154148874 154149234 -96538620 + MLT1I LTR MaLR 12 400 -9 676 225 225 21 chr2 154149236 154149822 -96538032 + LTR50 LTR ERVL 1 795 0 34 42 0 0 chr2 154149829 154149877 -96537977 + AT_rich Low_complexity Low_complexity 1 48 0 765 155 0 31 chr2 154149881 154150010 -96537844 - FLAM_C SINE Alu -16 127 3 24 0 0 0 chr2 154150244 154150268 -96537586 + AT_rich Low_complexity Low_complexity 1 24 0 797 313 43 9 chr2 154151157 154151390 -96536464 - MIR SINE MIR -6 256 16 209 246 0 35 chr2 154151583 154151640 -96536214 - L2 LINE L2 0 3313 3259 349 322 155 65 chr2 154151748 154152207 -96535647 - L2 LINE L2 -532 2782 2283 338 106 67 29 chr2 154152215 154152319 -96535535 + (TA)n Simple_repeat Simple_repeat 2 109 0 457 116 46 35 chr2 154152319 154152492 -96535362 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 439 99 106 19 chr2 154152495 154152656 -96535198 + (TA)n Simple_repeat Simple_repeat 2 176 0 348 161 11 50 chr2 154152656 154152836 -96535018 + (TTATA)n Simple_repeat Simple_repeat 5 177 0 278 75 106 21 chr2 154152841 154152935 -96534919 + (TA)n Simple_repeat Simple_repeat 2 103 0 282 143 58 63 chr2 154152938 154153288 -96534566 + (CATATA)n Simple_repeat Simple_repeat 1 348 0 238 171 70 39 chr2 154153260 154153389 -96534465 + (TA)n Simple_repeat Simple_repeat 1 133 0 * 256 203 32 32 chr2 154153576 154153699 -96534155 + (TA)n Simple_repeat Simple_repeat 2 124 0 458 151 0 94 chr2 154154345 154154451 -96533403 - L1PA10 LINE L1 0 6168 6073 2096 112 0 0 chr2 154154839 154155126 -96532728 + AluSg1 SINE Alu 1 287 -22 2323 245 67 36 chr2 154155697 154156440 -96531414 - L1ME3A LINE L1 0 6965 6200 4924 251 85 62 chr2 154156463 154157023 -96530831 - L1ME3A LINE L1 -736 6223 5677 1514 209 0 4 chr2 154157023 154157301 -96530553 + AluJo SINE Alu 5 281 -31 233 29 0 29 chr2 154157301 154157336 -96530518 + (CAAAC)n Simple_repeat Simple_repeat 1 34 0 4924 251 85 62 chr2 154157336 154159944 -96527910 - L1ME3A LINE L1 -1281 5678 2995 6766 90 26 12 chr2 154159944 154160949 -96526905 - L1MA1 LINE L1 0 6302 5284 5574 150 30 14 chr2 154160958 154161932 -96525922 - L1MA1 LINE L1 -1062 5084 4090 2329 135 6 8 chr2 154161932 154162296 -96525558 + THE1B LTR MaLR 2 364 0 5574 150 30 14 chr2 154162296 154162398 -96525456 - L1MA1 LINE L1 -2056 4090 3991 228 291 60 17 chr2 154162439 154162556 -96525298 - L1ME3A LINE L1 -4119 3003 2882 597 137 0 0 chr2 154162557 154162652 -96525202 - AluSg/x SINE Alu -1 308 214 5849 112 12 21 chr2 154162654 154163869 -96523985 + L1PA14 LINE L1 4955 6161 0 620 240 22 48 chr2 154163880 154164109 -96523745 - L1MC4 LINE L1 0 8042 7820 529 310 108 58 chr2 154164123 154164558 -96523296 - L1ME3A LINE L1 -4620 2321 1865 302 113 0 19 chr2 154164558 154164611 -96523243 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 355 323 60 23 chr2 154164611 154164642 -96523212 - L1ME3A LINE L1 -4681 2191 2163 2061 81 0 0 chr2 154164642 154164915 -96522939 - AluY SINE Alu -38 273 1 355 323 60 23 chr2 154164915 154165143 -96522711 - L1ME3A LINE L1 -4709 2163 1690 247 346 22 32 chr2 154165211 154165396 -96522458 - L1ME3A LINE L1 -5073 1350 1168 252 318 104 17 chr2 154166958 154167131 -96520723 - MIR SINE MIR -7 255 68 2047 149 13 0 chr2 154168560 154168868 -96518986 + AluSx SINE Alu 1 312 0 311 248 41 83 chr2 154168985 154169106 -96518748 - L2 LINE L2 -10 3303 3188 2229 167 54 10 chr2 154169444 154169852 -96518002 + MSTB LTR MaLR 1 426 0 180 0 0 0 chr2 154171938 154171958 -96515896 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2323 113 0 26 chr2 154172092 154172438 -96515416 - MER1B DNA MER1_type 0 337 1 213 39 0 0 chr2 154172885 154172911 -96514943 + (CA)n Simple_repeat Simple_repeat 2 27 0 1945 168 27 3 chr2 154172934 154173262 -96514592 + MER2 DNA MER2_type 1 336 -9 700 306 94 41 chr2 154173301 154173664 -96514190 - MLT1K LTR MaLR -86 502 121 296 385 40 0 chr2 154174407 154174555 -96513299 + L2 LINE L2 3117 3270 -2 219 114 0 0 chr2 154174919 154174954 -96512900 + (A)n Simple_repeat Simple_repeat 1 35 0 1898 125 14 7 chr2 154175259 154175546 -96512308 - AluSq SINE Alu -19 294 6 22 0 0 0 chr2 154176395 154176417 -96511437 + AT_rich Low_complexity Low_complexity 1 22 0 1628 145 112 21 chr2 154176974 154177312 -96510542 - THE1C LTR MaLR 0 375 7 1178 243 43 30 chr2 154177785 154178163 -96509691 + LTR48B LTR ERV1 205 644 0 1035 140 64 228 chr2 154178526 154179026 -96508828 - LTR23 LTR ERV1 -10 427 10 372 368 15 11 chr2 154179926 154180195 -96507659 - LTR12-int LTR ERV1 -2088 2559 2290 1691 144 75 33 chr2 154180226 154180586 -96507268 - THE1C LTR MaLR 0 375 1 1469 174 27 73 chr2 154180600 154181013 -96506841 - LTR12-int LTR ERV1 -1832 4499 4106 3913 132 40 38 chr2 154181051 154182023 -96505831 - pTR5 LTR ERV1 0 2468 1524 1051 305 31 29 chr2 154232023 154232922 -96454932 - LTR12-int LTR ERV1 -120 8186 7382 349 161 0 0 chr2 154233795 154233851 -96454003 - MER51A-int LTR ERV1 -274 7542 7487 255 308 59 59 chr2 154233998 154234167 -96453687 - MER51A-int LTR ERV1 -1700 6926 6758 2596 305 52 51 chr2 154234230 154237125 -96450729 - MER51A-int LTR ERV1 -1037 3917 2897 274 327 31 31 chr2 154237795 154238018 -96449836 - MER51A-int LTR ERV1 -3138 1816 1594 574 281 24 32 chr2 154238630 154238924 -96448930 - MER51A-int LTR ERV1 -5050 1813 1429 734 193 6 50 chr2 154239001 154239182 -96448672 - MER51A-int LTR ERV1 -7018 798 626 704 120 53 8 chr2 154239179 154239312 -96448542 - MER51A-int LTR ERV1 -2416 3530 3392 * 503 84 0 14 chr2 154239312 154239383 -96448471 + AluSc SINE Alu 62 131 -178 900 90 0 0 chr2 154239484 154239595 -96448259 - AluYb8 SINE Alu -207 111 1 294 151 12 52 chr2 154239596 154239677 -96448177 - MER51A-int LTR ERV1 -2571 4006 2361 2480 164 50 71 chr2 154239753 154240290 -96447564 - MER51A-int LTR ERV1 -7289 527 2 1626 142 25 14 chr2 154240291 154240757 -96447097 - MER51A LTR ERV1 0 634 1 612 268 147 36 chr2 154241372 154241929 -96445925 + HAL1b LINE L1 331 949 -399 235 162 103 29 chr2 154242135 154242203 -96445651 - MLT1K LTR MaLR -32 556 484 6071 200 39 21 chr2 154242451 154243875 -96443979 + Charlie1a DNA MER1_type 7 1455 0 433 309 92 36 chr2 154244632 154244936 -96442918 + L1M4 LINE L1 2979 3299 -2847 2398 100 3 0 chr2 154244975 154245285 -96442569 - AluSq SINE Alu -2 311 1 303 191 65 77 chr2 154245286 154245454 -96442400 + L1MC/D LINE L1 5318 5483 -2325 24 77 0 0 chr2 154245513 154245565 -96442289 + AT_rich Low_complexity Low_complexity 1 52 0 310 286 177 15 chr2 154246071 154246274 -96441580 + L1MC/D LINE L1 5606 5841 -1967 585 114 114 0 chr2 154246316 154246430 -96441424 + L1MA4 LINE L1 6165 6291 -9 21 0 0 0 chr2 154247745 154247766 -96440088 + AT_rich Low_complexity Low_complexity 1 21 0 234 303 77 58 chr2 154248198 154248353 -96439501 + L2 LINE L2 2612 2769 -545 413 170 96 0 chr2 154249451 154249545 -96438309 - LTR24B LTR ERV1 -6 570 468 869 191 97 47 chr2 154249567 154249865 -96437989 - LTR56 LTR ERV1 -121 324 12 216 325 155 20 chr2 154249874 154250074 -96437780 + L2 LINE L2 2508 2734 -580 1887 215 63 18 chr2 154250625 154251229 -96436625 - MER69 DNA AcHobo -366 2160 1530 960 270 60 19 chr2 154251230 154251497 -96436357 - MER69 DNA AcHobo -940 286 9 428 252 14 17 chr2 154251522 154251651 -96436203 + MIR3 SINE MIR 80 172 -36 225 311 61 22 chr2 154251869 154252049 -96435805 + L1MC5 LINE L1 5777 5963 -1845 295 269 82 37 chr2 154252182 154252450 -96435404 + MER69 DNA AcHobo 1534 1813 -713 1443 213 97 135 chr2 154252604 154252660 -96435194 + L1MC5 LINE L1 6449 6506 -1455 21 36 0 0 chr2 154252660 154252688 -96435166 + AT_rich Low_complexity Low_complexity 1 28 0 1443 213 97 135 chr2 154252688 154253661 -96434193 + L1MC5 LINE L1 6506 7474 -487 331 234 61 86 chr2 154253787 154253984 -96433870 + L1MC5 LINE L1 7609 7800 -161 419 244 8 32 chr2 154254444 154254527 -96433327 - MER94 DNA DNA -4 130 49 1068 177 130 72 chr2 154254527 154254872 -96432982 - MLT1A1 LTR MaLR 0 365 1 419 244 8 32 chr2 154254872 154254911 -96432943 - MER94 DNA DNA -85 49 11 222 118 0 0 chr2 154255303 154255337 -96432517 + (TAA)n Simple_repeat Simple_repeat 1 34 0 827 310 51 36 chr2 154255799 154256328 -96431526 - L1MEc LINE L1 -5859 537 1 580 245 19 20 chr2 154256804 154257019 -96430835 + MER58 DNA MER1_type 3 2420 0 219 263 0 18 chr2 154257053 154257110 -96430744 - L2 LINE L2 -3 3310 3255 879 310 95 12 chr2 154258828 154259228 -96428626 - MLT1K LTR MaLR -19 569 137 844 309 91 24 chr2 154261596 154262056 -96425798 + MER20B DNA MER1_type 38 528 -255 1112 183 139 26 chr2 154262064 154262337 -96425517 - MER2 DNA MER2_type -2 343 40 491 0 17 0 chr2 154262341 154262400 -96425454 + (TG)n Simple_repeat Simple_repeat 1 60 0 295 220 70 90 chr2 154262405 154262605 -96425249 + MER20B DNA MER1_type 533 728 -55 2258 125 0 0 chr2 154262764 154263069 -96424785 + AluSg SINE Alu 1 305 -5 916 199 44 151 chr2 154263548 154263980 -96423874 - MLT1B LTR MaLR 0 390 5 1983 191 46 2 chr2 154264033 154264510 -96423344 + L1 LINE L1 3092 3589 -2557 566 246 8 0 chr2 154264510 154264640 -96423214 + MLT1B LTR MaLR 260 390 0 712 203 21 0 chr2 154264662 154264805 -96423049 + L1 LINE L1 3614 3759 -2387 * 40881 34 3 2 chr2 154264800 154270524 -96417330 + L1PA3 LINE L1 425 6152 -3 559 219 0 0 chr2 154270554 154270682 -96417172 + L1 LINE L1 3741 3868 -2278 1637 141 6 63 chr2 154270707 154271145 -96416709 + L1MA4 LINE L1 5417 5787 -513 1926 76 23 0 chr2 154271145 154271404 -96416450 + L1PA11 LINE L1 5904 6171 -3 2165 192 47 4 chr2 154271404 154271904 -96415950 + L1MA4 LINE L1 5764 6296 -4 21 36 0 0 chr2 154272545 154272573 -96415281 + AT_rich Low_complexity Low_complexity 1 28 0 514 327 114 16 chr2 154274936 154275321 -96412533 - L1ME3A LINE L1 -231 5939 5517 331 231 84 49 chr2 154275358 154275522 -96412332 - L1ME3A LINE L1 -749 5397 5258 211 91 80 11 chr2 154275538 154275626 -96412228 + (TA)n Simple_repeat Simple_repeat 1 94 0 936 306 48 22 chr2 154275640 154276281 -96411573 - L1ME3A LINE L1 -874 5272 4615 309 259 43 9 chr2 154276299 154276415 -96411439 - L1ME3A LINE L1 -1629 4517 4398 42856 32 21 1 chr2 154276428 154282458 -96405396 - L1HS LINE L1 0 6155 3 1572 155 17 57 chr2 154282503 154282645 -96405209 + AluJo SINE Alu 6 131 -181 2353 97 0 6 chr2 154282645 154282956 -96404898 + AluSc SINE Alu 1 309 0 1572 155 17 57 chr2 154282956 154283110 -96404744 + AluJo SINE Alu 131 290 -22 1599 174 27 27 chr2 154283745 154284044 -96403810 - AluJo SINE Alu -13 299 1 640 313 68 27 chr2 154284091 154284508 -96403346 - L1MEc LINE L1 -711 1779 1286 436 319 73 20 chr2 154284530 154285366 -96402488 - L1MEc LINE L1 -4943 1176 284 2061 129 24 54 chr2 154285483 154285678 -96402176 - THE1B LTR MaLR 0 364 184 2234 112 0 7 chr2 154285678 154285981 -96401873 - AluSg SINE Alu -9 301 1 2061 129 24 54 chr2 154285981 154286157 -96401697 - THE1B LTR MaLR -180 184 4 11513 105 3 1 chr2 154286157 154287718 -96400136 - THE1B-int LTR MaLR -15 1565 1 2170 136 45 17 chr2 154287718 154288070 -96399784 - THE1B LTR MaLR 0 364 3 293 339 31 8 chr2 154288823 154288953 -96398901 - LTR16C LTR ERVL -2 489 357 1552 241 7 3 chr2 154289891 154290194 -96397660 + Tigger5 DNA MER2_type 1 304 -2019 1228 132 39 5 chr2 154290202 154290407 -96397447 + Tigger5 DNA MER2_type 2112 2323 0 699 87 0 0 chr2 154291867 154291959 -96395895 + AluY SINE Alu 203 294 -17 493 308 11 16 chr2 154292157 154292342 -96395512 + MER5A DNA MER1_type 2 185 -4 385 339 108 5 chr2 154292827 154293013 -96394841 - MIR SINE MIR -6 256 52 241 300 67 11 chr2 154293024 154293114 -96394740 + L2 LINE L2 1236 1330 -1984 464 284 165 31 chr2 154294139 154294614 -96393240 + L2 LINE L2 1488 3309 -4 6183 148 30 13 chr2 154294722 154295885 -96391969 - L1MC1 LINE L1 0 6333 5157 229 224 82 0 chr2 154296330 154296415 -96391439 - MLT1K LTR MaLR 0 588 497 229 346 67 10 chr2 154296465 154296569 -96391285 - MLT1K LTR MaLR -190 398 289 21 0 0 0 chr2 154296939 154296960 -96390894 + AT_rich Low_complexity Low_complexity 1 21 0 1720 159 7 28 chr2 154297070 154297360 -96390494 - AluJo SINE Alu -18 294 11 22 0 0 0 chr2 154297392 154297414 -96390440 + AT_rich Low_complexity Low_complexity 1 22 0 339 307 87 7 chr2 154297841 154297991 -96389863 + MIR SINE MIR 95 256 -6 1260 247 52 18 chr2 154298415 154298796 -96389058 - MSTD LTR MaLR -2 394 1 3019 187 98 32 chr2 154299349 154299434 -96388420 + L1MB3 LINE L1 5306 5384 -799 1632 188 0 41 chr2 154299434 154299753 -96388101 + AluJo SINE Alu 1 306 -6 3019 187 98 32 chr2 154299753 154300487 -96387367 + L1MB3 LINE L1 5384 6179 -4 3332 261 138 25 chr2 154301053 154302293 -96385561 + L1M1 LINE L1 5 1384 -5825 * 7134 178 41 19 chr2 154302290 154303384 -96384470 + L1M1 LINE L1 4659 5815 -1550 180 0 0 0 chr2 154303384 154303404 -96384450 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7134 178 41 19 chr2 154303404 154304337 -96383517 + L1M1 LINE L1 5815 6726 -639 228 291 87 24 chr2 154304422 154304549 -96383305 + L2 LINE L2 2919 3053 -219 2002 181 11 162 chr2 154304642 154305260 -96382594 - MER70B LTR ERVL -53 525 1 4278 205 23 38 chr2 154305479 154305558 -96382296 - L1MB2 LINE L1 0 6171 6092 2176 108 7 0 chr2 154305558 154305853 -96382001 - AluSp SINE Alu -16 297 1 4278 205 23 38 chr2 154305853 154307750 -96380104 - L1MB2 LINE L1 -79 6092 4232 335 220 17 0 chr2 154307754 154307813 -96380041 - MER2 DNA MER2_type 0 345 286 * 488 254 15 34 chr2 154307810 154307940 -96379914 - MER2 DNA MER2_type -102 137 1 3793 184 75 43 chr2 154307940 154308682 -96379172 - L1MB2 LINE L1 -1917 4229 3447 234 0 0 0 chr2 154308682 154308708 -96379146 + (TTA)n Simple_repeat Simple_repeat 2 27 0 3793 184 75 43 chr2 154308708 154308945 -96378909 - L1MB2 LINE L1 -2699 3447 3219 1008 231 91 65 chr2 154310597 154310766 -96377088 + MSTD LTR MaLR 1 164 -232 2110 122 3 25 chr2 154310766 154311086 -96376768 + AluSq SINE Alu 1 313 0 1008 231 91 65 chr2 154311086 154311302 -96376552 + MSTD LTR MaLR 164 396 0 26 0 0 0 chr2 154311694 154311720 -96376134 + AT_rich Low_complexity Low_complexity 1 26 0 186 286 0 0 chr2 154311853 154311902 -96375952 - L2 LINE L2 -36 3236 3188 224 189 0 0 chr2 154311902 154311939 -96375915 + polypurine Low_complexity Low_complexity 3 39 0 361 364 31 52 chr2 154312046 154312364 -96375490 - L2 LINE L2 -254 3059 2748 6516 74 2 3 chr2 154312394 154313672 -96374182 - L1PA8A LINE L1 -18 6113 4836 333 250 39 109 chr2 154314097 154314253 -96373601 - L1MC4a LINE L1 -1961 5847 5703 264 316 287 7 chr2 154314528 154314664 -96373190 - MIR3 SINE MIR -15 193 20 27 29 0 0 chr2 154315291 154315325 -96372529 + AT_rich Low_complexity Low_complexity 1 34 0 186 43 0 0 chr2 154315369 154315392 -96372462 + (TATG)n Simple_repeat Simple_repeat 2 24 0 1170 235 130 14 chr2 154316010 154316510 -96371344 + MLT2F LTR ERVL 3 607 -56 297 0 0 0 chr2 154316544 154316577 -96371277 + (CA)n Simple_repeat Simple_repeat 2 34 0 2641 197 35 5 chr2 154316884 154317477 -96370377 + L1PA16 LINE L1 4747 5357 -789 2670 118 7 45 chr2 154317477 154317916 -96369938 + L1PA16 LINE L1 5734 6157 -9 22 88 0 0 chr2 154317916 154317973 -96369881 + AT_rich Low_complexity Low_complexity 1 57 0 1584 208 48 23 chr2 154318056 154318530 -96369324 - MER119 DNA MER1_type 0 583 1 734 358 66 44 chr2 154318663 154319411 -96368443 - L2 LINE L2 0 3272 2505 782 254 64 0 chr2 154319421 154319594 -96368260 - MER5A DNA MER1_type -5 184 1 292 363 123 16 chr2 154319662 154319971 -96367883 - L2 LINE L2 -1904 1410 1069 24 0 0 0 chr2 154320255 154320279 -96367575 + AT_rich Low_complexity Low_complexity 1 24 0 27 73 0 0 chr2 154320571 154320626 -96367228 + AT_rich Low_complexity Low_complexity 1 55 0 761 260 147 30 chr2 154320820 154321282 -96366572 + LTR33A LTR ERVL 6 521 -2 21 36 0 0 chr2 154322494 154322522 -96365332 + AT_rich Low_complexity Low_complexity 1 28 0 271 212 61 0 chr2 154323055 154323121 -96364733 + MER112 DNA MER1_type 4 73 -187 1755 195 32 3 chr2 154325386 154325725 -96362129 + Tigger1 DNA MER2_type 2 350 -2068 2363 183 11 4 chr2 154325727 154326211 -96361643 - L1MEd LINE L1 -3581 3267 2773 * 4686 149 20 111 chr2 154326198 154326811 -96361043 - L1PBa LINE L1 -5850 1013 543 2370 69 3 31 chr2 154326811 154327131 -96360723 + AluY SINE Alu 1 311 0 4686 149 20 111 chr2 154327131 154327621 -96360233 - L1PBa LINE L1 -6320 543 10 850 192 43 29 chr2 154327622 154327830 -96360024 + Tigger1 DNA MER2_type 2207 2417 -1 243 362 31 88 chr2 154328192 154328543 -96359311 + L2 LINE L2 2600 2930 -384 27 0 0 0 chr2 154328723 154328750 -96359104 + AT_rich Low_complexity Low_complexity 1 27 0 2045 198 39 2 chr2 154329837 154330252 -96357602 + MER63B DNA MER1_type 1 430 -6 415 221 33 72 chr2 154330430 154330611 -96357243 + MER104 DNA Tc2 7 180 0 460 274 51 89 chr2 154331571 154331942 -96355912 - L1ME LINE L1 -440 5681 5319 21 0 0 0 chr2 154332047 154332068 -96355786 + AT_rich Low_complexity Low_complexity 1 21 0 1586 221 44 3 chr2 154332145 154332484 -96355370 + MLT1A1 LTR MaLR 13 365 0 260 220 0 0 chr2 154332659 154332709 -96355145 - LTR16C LTR ERVL -2 489 440 1420 266 173 4 chr2 154332713 154333194 -96354660 - REP3 LTR ERV 0 562 1 687 327 52 26 chr2 154333195 154333544 -96354310 - LTR16C LTR ERVL -52 439 82 825 181 52 94 chr2 154334162 154334450 -96353404 + MLT1D LTR MaLR 1 276 -229 317 240 90 0 chr2 154334588 154334688 -96353166 - HAL1 LINE L1 -1313 1194 1086 585 284 124 47 chr2 154335351 154335866 -96351988 - L1MEd LINE L1 -5004 1834 1280 2011 132 3 7 chr2 154336112 154336407 -96351447 - AluSx SINE Alu -18 294 1 22 0 0 0 chr2 154337286 154337308 -96350546 + AT_rich Low_complexity Low_complexity 1 22 0 2721 160 29 11 chr2 154338791 154339311 -96348543 + L1MC2 LINE L1 5807 6335 -9 21 0 0 0 chr2 154339642 154339663 -96348191 + AT_rich Low_complexity Low_complexity 1 21 0 641 176 161 112 chr2 154340384 154340589 -96347265 + MER58C DNA MER1_type 1 215 0 240 244 73 37 chr2 154341677 154341759 -96346095 - MIR SINE MIR -21 241 157 29 84 0 0 chr2 154341950 154342021 -96345833 + AT_rich Low_complexity Low_complexity 1 71 0 3002 249 122 52 chr2 154342139 154343065 -96344789 - L1MC5 LINE L1 -62 7899 7040 912 239 159 7 chr2 154343065 154343366 -96344488 - MER7A DNA MER2_type 0 346 2 3002 249 122 52 chr2 154343366 154343413 -96344441 - L1MC5 LINE L1 -921 7040 6998 1447 217 25 0 chr2 154343413 154343694 -96344160 - AluJo SINE Alu -24 288 1 3002 249 122 52 chr2 154343694 154344935 -96342919 - L1MC5 LINE L1 -963 6998 5487 27 0 0 0 chr2 154345592 154345619 -96342235 + AT_rich Low_complexity Low_complexity 1 27 0 2225 105 3 0 chr2 154345619 154345913 -96341941 - AluSq SINE Alu -18 295 1 787 311 42 11 chr2 154345994 154346277 -96341577 - MER93a LTR ERV1 -3 399 108 393 248 0 10 chr2 154346361 154346462 -96341392 - MER93a LTR ERV1 -3 399 300 237 284 148 61 chr2 154346579 154346971 -96340883 - L1MC5 LINE L1 -1592 4554 4197 2114 123 27 0 chr2 154346971 154347272 -96340582 - AluSx SINE Alu -3 309 1 237 284 148 61 chr2 154347272 154347678 -96340176 - L1MC5 LINE L1 -1949 4197 3687 677 210 56 84 chr2 154347687 154347901 -96339953 - MER74A LTR ERVL -2 556 349 2093 182 41 10 chr2 154347921 154348339 -96339515 - MER95 LTR ERV 0 431 1 1481 191 20 20 chr2 154348347 154348641 -96339213 - MER74A LTR ERVL -264 294 1 989 289 158 40 chr2 154348643 154349744 -96338110 - L1 LINE L1 -2720 3426 2201 6334 111 9 4 chr2 154349884 154350834 -96337020 - L1MA1 LINE L1 0 6302 5348 2525 140 12 0 chr2 154350834 154351233 -96336621 - L1PB1 LINE L1 -12 6855 6452 447 19 0 0 chr2 154351235 154351280 -96336574 + (TA)n Simple_repeat Simple_repeat 1 48 -6 423 0 0 0 chr2 154351280 154351327 -96336527 + (CA)n Simple_repeat Simple_repeat 2 48 0 447 19 0 0 chr2 154351327 154351335 -96336519 + (TA)n Simple_repeat Simple_repeat 47 54 0 203 270 15 22 chr2 154351341 154351478 -96336376 + (TAAA)n Simple_repeat Simple_repeat 1 136 0 207 0 0 0 chr2 154351482 154351505 -96336349 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1897 135 7 0 chr2 154351509 154351783 -96336071 - AluSg SINE Alu -32 278 3 4373 170 7 24 chr2 154351786 154353132 -96334722 - L1PB1 LINE L1 -415 6452 5133 2302 135 25 0 chr2 154353132 154353487 -96334367 + THE1B LTR MaLR 1 364 0 10044 115 45 7 chr2 154353487 154355008 -96332846 + THE1B-int LTR MaLR 1 1580 0 1964 137 77 0 chr2 154355008 154355345 -96332509 + THE1B LTR MaLR 1 363 -1 410 0 20 0 chr2 154355355 154355405 -96332449 + (TTTTA)n Simple_repeat Simple_repeat 2 52 0 8682 232 25 13 chr2 154355405 154358393 -96329461 - L1PB1 LINE L1 -1749 5113 2079 6175 182 62 9 chr2 154358642 154359905 -96327949 - L1PB1 LINE L1 -5534 1329 1 12939 178 28 20 chr2 154359926 154361471 -96326383 - L1 LINE L1 -837 6728 5197 2165 111 6 16 chr2 154361471 154361786 -96326068 - AluSx SINE Alu 0 312 1 12939 178 28 20 chr2 154361786 154362586 -96325268 - L1 LINE L1 -2368 5197 4405 7632 46 9 0 chr2 154362586 154364312 -96323542 + L1PA5 LINE L1 4442 6175 0 12939 178 28 20 chr2 154364312 154365643 -96322211 - L1 LINE L1 -3160 4405 3018 254 204 0 0 chr2 154365643 154365692 -96322162 - L1 LINE L1 -7505 60 12 1988 138 16 0 chr2 154366035 154366339 -96321515 + AluSx SINE Alu 1 309 -3 334 288 129 17 chr2 154366372 154366605 -96321249 - HAL1b LINE L1 -608 740 482 652 249 138 65 chr2 154366733 154367147 -96320707 - L1ME3A LINE L1 -194 5968 5525 188 296 70 0 chr2 154367147 154367218 -96320636 - MIR3 SINE MIR -13 195 120 880 126 63 0 chr2 154367243 154367386 -96320468 + AluSg/x SINE Alu 156 307 -3 1919 126 3 45 chr2 154368993 154369302 -96318552 + AluSx SINE Alu 1 296 -16 300 190 0 0 chr2 154370413 154370492 -96317362 + CT-rich Low_complexity Low_complexity 2 80 0 710 311 105 20 chr2 154371250 154371665 -96316189 + L2 LINE L2 2613 3062 -251 364 286 32 32 chr2 154371895 154372049 -96315805 + L2 LINE L2 3118 3271 -42 193 381 31 41 chr2 154372162 154372356 -96315498 + L2 LINE L2 3076 3267 -5 476 353 110 10 chr2 154372520 154372829 -96315025 + MER102b DNA MER1_type 2 341 0 1882 31 4 0 chr2 154373132 154373357 -96314497 - L1PA3 LINE L1 0 6155 5930 6162 21 9 0 chr2 154373375 154374138 -96313716 + L1P LINE L1 3746 4515 -1631 227 361 49 35 chr2 154375563 154375707 -96312147 - MER5A DNA MER1_type 0 189 44 * 269 329 21 71 chr2 154375604 154375744 -96312110 + MER5A DNA MER1_type 57 189 0 1593 136 0 5 chr2 154376203 154376424 -96311430 - AluSx SINE Alu -92 220 1 354 312 89 6 chr2 154378790 154378947 -96308907 + MIR3 SINE MIR 30 199 -9 211 333 103 51 chr2 154381998 154382154 -96305700 - MIR3 SINE MIR -22 186 23 841 275 46 8 chr2 154383105 154383345 -96304509 + MIR SINE MIR 1 249 -13 339 247 31 52 chr2 154383856 154383953 -96303901 + L2 LINE L2 3201 3295 -18 21 0 0 0 chr2 154383980 154384001 -96303853 + AT_rich Low_complexity Low_complexity 1 21 0 401 288 75 19 chr2 154384734 154385001 -96302853 + MARNA DNA Mariner 207 488 -98 2576 62 0 0 chr2 154385037 154385344 -96302510 - AluY SINE Alu -4 307 1 342 0 0 0 chr2 154386354 154386392 -96301462 + (CA)n Simple_repeat Simple_repeat 2 39 0 226 330 95 82 chr2 154386525 154386904 -96300950 + L2 LINE L2 2889 3272 0 718 264 35 39 chr2 154386961 154387102 -96300752 - MIR SINE MIR -29 233 92 2770 109 0 5 chr2 154387102 154387479 -96300375 + THE1C LTR MaLR 1 375 0 718 264 35 39 chr2 154387479 154387568 -96300286 - MIR SINE MIR -170 92 4 633 319 49 52 chr2 154387886 154388271 -96299583 + LTR16C LTR ERVL 108 491 0 1946 134 10 17 chr2 154389771 154390070 -96297784 - AluSx SINE Alu -7 305 9 313 309 183 0 chr2 154390087 154390262 -96297592 - L1ME4a LINE L1 -65 6056 5850 277 340 28 19 chr2 154390424 154390530 -96297324 + L2 LINE L2 3207 3313 0 879 158 50 36 chr2 154391040 154391262 -96296592 + MLT1C LTR MaLR 1 225 -242 641 255 134 13 chr2 154391371 154391610 -96296244 + MLT1C LTR MaLR 200 467 0 1708 260 62 41 chr2 154392063 154392644 -96295210 + MLT1E LTR MaLR 1 593 0 2123 94 7 0 chr2 154392743 154393044 -96294810 - AluSc SINE Alu 0 303 1 367 300 6 62 chr2 154393167 154393243 -96294611 - MIR3 SINE MIR -39 169 105 808 167 21 16 chr2 154393243 154393429 -96294425 + MER53 DNA DNA 2 188 -1 367 300 6 62 chr2 154393429 154393512 -96294342 - MIR3 SINE MIR -103 105 19 234 0 0 0 chr2 154394539 154394565 -96293289 + (TA)n Simple_repeat Simple_repeat 1 26 0 285 324 72 0 chr2 154395537 154395648 -96292206 - MIR SINE MIR -142 120 2 457 242 130 61 chr2 154396942 154397173 -96290681 - MIR SINE MIR -3 259 13 2311 112 22 27 chr2 154397237 154397603 -96290251 - THE1B LTR MaLR 0 364 1 2102 118 72 26 chr2 154397737 154398083 -96289771 - THE1B LTR MaLR -2 362 1 2213 112 11 0 chr2 154398550 154398837 -96289017 + AluSc SINE Alu 1 290 -19 893 253 128 22 chr2 154399078 154399390 -96288464 + L2 LINE L2 2435 2779 -535 404 317 36 24 chr2 154399406 154399573 -96288281 - MER5B DNA MER1_type -7 171 3 193 280 236 11 chr2 154399580 154399762 -96288092 + L2 LINE L2 2807 3029 -284 227 306 0 16 chr2 154400089 154400151 -96287703 + L3 LINE CR1 1516 1576 -1 1813 171 0 10 chr2 154401786 154402078 -96285776 - AluJb SINE Alu -23 289 1 180 0 0 0 chr2 154402091 154402111 -96285743 + (T)n Simple_repeat Simple_repeat 1 20 0 1384 190 53 11 chr2 154402343 154402662 -96285192 + MER61B LTR ERV1 1 425 0 1119 204 99 51 chr2 154404051 154404404 -96283450 - MLT1A2 LTR MaLR -4 370 1 24 32 0 0 chr2 154404904 154404935 -96282919 + AT_rich Low_complexity Low_complexity 1 31 0 225 0 0 0 chr2 154405904 154405929 -96281925 + (CA)n Simple_repeat Simple_repeat 1 25 0 222 295 126 66 chr2 154406573 154406756 -96281098 + MIR SINE MIR 18 211 -51 529 158 25 75 chr2 154406828 154406948 -96280906 - MER81 DNA DNA 0 114 1 924 196 84 18 chr2 154407068 154407293 -96280561 - MIR SINE MIR -21 241 2 193 301 20 87 chr2 154408583 154408779 -96279075 - L2 LINE L2 -227 3045 2863 332 291 10 19 chr2 154409240 154409343 -96278511 - MIR SINE MIR -1 261 160 190 255 21 0 chr2 154409505 154409552 -96278302 - MIR SINE MIR -128 134 87 1536 170 26 61 chr2 154409935 154410312 -96277542 - L1MB8 LINE L1 -37 6141 5778 1212 293 98 5 chr2 154410308 154410725 -96277129 - L1M4b LINE L1 -6219 640 185 * 332 219 31 0 chr2 154410758 154410822 -96277032 - L1M4b LINE L1 -6783 76 11 210 194 0 0 chr2 154411627 154411689 -96276165 + GA-rich Low_complexity Low_complexity 1 62 0 461 329 59 0 chr2 154413290 154413442 -96274412 + MIR3 SINE MIR 17 177 -31 307 339 65 45 chr2 154413800 154414045 -96273809 + MIR SINE MIR 13 262 0 229 310 0 0 chr2 154415068 154415126 -96272728 - MIR SINE MIR -96 112 55 203 388 0 0 chr2 154415818 154415885 -96271969 - L2 LINE L2 -7 3306 3240 228 271 55 21 chr2 154416089 154416183 -96271671 - MIR SINE MIR -63 145 74 379 269 186 0 chr2 154418237 154418382 -96269472 - MIR SINE MIR -67 195 24 475 267 101 68 chr2 154418386 154418786 -96269068 + MLT1I LTR MaLR 1 409 0 7077 58 6 7 chr2 154419312 154420262 -96267592 - L1PA4 LINE L1 -779 5367 4419 6373 47 2 1 chr2 154420262 154421052 -96266802 + L1PA4 LINE L1 5363 6154 -1 6099 92 61 12 chr2 154421471 154422966 -96264888 - L1PA13 LINE L1 -2 6161 4616 10702 176 17 11 chr2 154423130 154423413 -96264441 - L1P LINE L1 -1426 4720 4440 2204 121 55 3 chr2 154423413 154423759 -96264095 + THE1B LTR MaLR 1 364 0 10702 176 17 11 chr2 154423759 154425559 -96262295 - L1P LINE L1 -1706 4440 2623 21 89 0 0 chr2 154427626 154427682 -96260172 + AT_rich Low_complexity Low_complexity 1 56 0 391 336 22 8 chr2 154429523 154429657 -96258197 - L2 LINE L2 -5 3267 3132 829 295 106 43 chr2 154430580 154431097 -96256757 - L2 LINE L2 -2 3311 2766 2527 37 3 0 chr2 154433038 154433336 -96254518 + AluY SINE Alu 1 299 -12 23 54 0 0 chr2 154433424 154433461 -96254393 + AT_rich Low_complexity Low_complexity 1 37 0 1487 157 15 67 chr2 154433793 154434136 -96253718 - L1MA10 LINE L1 -12 6322 5998 408 368 25 0 chr2 154434148 154434387 -96253467 - L1MC/D LINE L1 -2213 5595 5351 993 274 29 0 chr2 154435441 154435686 -96252168 + MLT1E1 LTR MaLR 1 252 -341 2569 127 33 5 chr2 154435701 154435922 -96251932 - LTR57 LTR ERVL -7 404 166 450 0 0 0 chr2 154435922 154435972 -96251882 + (TG)n Simple_repeat Simple_repeat 1 50 0 2569 127 33 5 chr2 154435972 154436143 -96251711 - LTR57 LTR ERVL -245 166 1 1401 191 36 18 chr2 154436143 154436410 -96251444 + MLT1E1 LTR MaLR 352 623 -31 342 270 133 21 chr2 154436547 154436785 -96251069 + MLT1I LTR MaLR 63 399 -10 767 163 77 41 chr2 154437701 154437897 -96249957 - L1MA9 LINE L1 -4 6308 6106 402 234 172 16 chr2 154437920 154438048 -96249806 + MIR SINE MIR 65 212 -50 646 301 83 26 chr2 154440302 154440568 -96247286 + MLT1L LTR MaLR 9 289 -326 334 168 141 32 chr2 154440702 154440839 -96247015 + L1ME LINE L1 5395 5543 -619 417 314 54 5 chr2 154440980 154441165 -96246689 + MLT1L LTR MaLR 420 613 -2 206 410 9 9 chr2 154442194 154442299 -96245555 + MIR SINE MIR 41 145 -63 211 154 31 0 chr2 154442355 154442420 -96245434 + (TA)n Simple_repeat Simple_repeat 2 68 0 258 222 0 133 chr2 154442739 154442829 -96245025 - MLT1C LTR MaLR -200 267 190 3633 204 122 90 chr2 154442951 154444264 -96243590 - MLT1-int LTR MaLR -15 1356 2 287 111 185 0 chr2 154444315 154444369 -96243485 - MLT2C2 LTR ERVL -400 64 1 329 264 82 0 chr2 154445746 154445888 -96241966 + L1MEc LINE L1 851 973 -5097 21 0 0 0 chr2 154445891 154445912 -96241942 + AT_rich Low_complexity Low_complexity 1 21 0 266 215 38 24 chr2 154445937 154446046 -96241808 + L1MEc LINE L1 1073 1222 -4886 461 333 105 3 chr2 154446104 154446398 -96241456 + L1MEc LINE L1 1359 1682 -4579 309 301 84 52 chr2 154446426 154446868 -96240986 + L1MEc LINE L1 1766 2221 -4040 10943 197 35 22 chr2 154446892 154448024 -96239830 - L1MA7 LINE L1 0 6495 5379 2044 127 3 25 chr2 154448024 154448340 -96239514 - AluSx SINE Alu -3 309 1 10943 197 35 22 chr2 154448340 154450892 -96236962 - L1MA7 LINE L1 -1116 5379 2764 24 0 0 0 chr2 154450901 154450925 -96236929 + AT_rich Low_complexity Low_complexity 1 24 0 324 197 31 7 chr2 154450925 154451216 -96236638 + (TA)n Simple_repeat Simple_repeat 1 298 0 2405 90 0 3 chr2 154451331 154451643 -96236211 - AluY SINE Alu 0 311 1 17396 150 14 11 chr2 154451739 154455873 -96231981 - L1PA11 LINE L1 0 6174 2039 2159 119 10 0 chr2 154455873 154456166 -96231688 - AluSq SINE Alu -17 296 1 17396 150 14 11 chr2 154456166 154456281 -96231573 - L1PA11 LINE L1 -4135 2039 1926 330 305 73 12 chr2 154456278 154456442 -96231412 + L1MEc LINE L1 3311 3484 -2596 * 23 33 0 0 chr2 154456447 154456477 -96231377 + AT_rich Low_complexity Low_complexity 1 30 0 1308 247 17 62 chr2 154456528 154456933 -96230921 - L1MA7 LINE L1 -5890 391 5 290 253 0 0 chr2 154456941 154457024 -96230830 + L1MEc LINE L1 2173 2255 -3825 729 255 116 14 chr2 154457054 154457415 -96230439 + L1MEc LINE L1 3585 3982 -2098 22 35 0 0 chr2 154457517 154457546 -96230308 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 154457962 154457985 -96229869 + AT_rich Low_complexity Low_complexity 1 23 0 1490 142 0 4 chr2 154458132 154458392 -96229462 - L1MA4A LINE L1 -7 7358 7100 12807 186 36 23 chr2 154458490 154462420 -96225434 - L1MA4A LINE L1 -270 7095 3074 4249 16 6 0 chr2 154462420 154462910 -96224944 + L1PA2 LINE L1 5663 6155 0 12807 186 36 23 chr2 154462910 154464493 -96223361 - L1MA4A LINE L1 -4291 3074 1514 5902 197 84 57 chr2 154464493 154466146 -96221708 - MER52A LTR ERV1 0 1755 58 265 234 13 13 chr2 154466186 154466263 -96221591 - MER52A LTR ERV1 -1678 77 1 2982 256 79 75 chr2 154466263 154467890 -96219964 - L1MA4A LINE L1 -5576 1633 1 370 328 35 0 chr2 154469836 154469952 -96217902 + L2 LINE L2 3153 3272 0 12955 53 79 4 chr2 154471027 154472840 -96215014 - L1P LINE L1 -4194 1952 3 574 67 22 11 chr2 154472840 154472930 -96214924 + HUERS-P1 LTR ERV1 4664 4754 -1509 * 4507 90 38 8 chr2 154472916 154473625 -96214229 + HUERS-P1 LTR ERV1 4574 5303 -643 585 141 10 0 chr2 154473631 154473730 -96214124 + LTR8 LTR ERV1 485 584 -107 315 0 0 0 chr2 154473731 154473766 -96214088 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3564 229 44 10 chr2 154473766 154474822 -96213032 - L1 LINE L1 -2942 4623 3533 2230 134 9 3 chr2 154474823 154475173 -96212681 + THE1B LTR MaLR 1 352 -12 13361 152 78 7 chr2 154475185 154477727 -96210127 - L1 LINE L1 -4029 3536 815 1796 161 0 12 chr2 154477728 154478064 -96209790 + L1P LINE L1 3559 3890 -2256 26584 33 2 0 chr2 154478164 154482008 -96205846 + L1PA3 LINE L1 1979 5829 -326 28643 44 39 2 chr2 154482108 154485924 -96201930 - L1P LINE L1 -2187 3959 3 574 67 22 11 chr2 154485924 154486014 -96201840 + HUERS-P1 LTR ERV1 4664 4754 -1509 * 4492 89 38 10 chr2 154486000 154486710 -96201144 + HUERS-P1 LTR ERV1 4574 5303 -643 585 141 10 0 chr2 154486716 154486815 -96201039 + LTR8 LTR ERV1 485 584 -107 315 0 0 0 chr2 154486816 154486851 -96201003 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3564 229 44 10 chr2 154486851 154487907 -96199947 - L1 LINE L1 -2942 4623 3533 2230 134 9 3 chr2 154487908 154488258 -96199596 + THE1B LTR MaLR 1 352 -12 17615 159 63 11 chr2 154488270 154490813 -96197041 - L1 LINE L1 -4029 3536 775 10560 144 27 13 chr2 154490813 154493406 -96194448 + L1PA10 LINE L1 3559 6165 -3 17615 159 63 11 chr2 154493406 154494208 -96193646 - L1 LINE L1 -6790 775 16 1160 132 0 0 chr2 154494221 154494403 -96193451 + Tigger1 DNA MER2_type 1830 2011 -407 967 185 60 5 chr2 154494404 154494620 -96193234 + Tigger1 DNA MER2_type 2191 2418 0 2032 154 5 29 chr2 154494847 154495231 -96192623 - THE1C LTR MaLR 0 375 1 5688 146 83 17 chr2 154495239 154496315 -96191539 - THE1C-int LTR MaLR -9 1571 425 669 134 55 16 chr2 154496337 154496464 -96191390 - THE1C LTR MaLR -238 137 6 9348 140 10 43 chr2 154496464 154498094 -96189760 - THE1C-int LTR MaLR -1 1579 4 1686 159 64 19 chr2 154498097 154498456 -96189398 - THE1C LTR MaLR 0 375 1 267 275 117 33 chr2 154498656 154498776 -96189078 - L2 LINE L2 -7 3265 3136 294 318 12 12 chr2 154498840 154498925 -96188929 - MIR SINE MIR -150 112 28 1591 192 38 3 chr2 154499021 154499308 -96188546 + AluJb SINE Alu 1 297 -15 11228 91 6 22 chr2 154499335 154501720 -96186134 + L1PA7 LINE L1 3764 6141 -13 1141 117 23 0 chr2 154502490 154502661 -96185193 + AluSq SINE Alu 126 300 -13 978 171 105 17 chr2 154503744 154504054 -96183800 + MSTD LTR MaLR 1 390 -6 343 290 67 5 chr2 154504343 154504524 -96183330 - L1ME LINE L1 -573 5548 5357 431 251 115 20 chr2 154505072 154505397 -96182457 - L1ME LINE L1 -723 5439 5087 12022 217 32 24 chr2 154505497 154506357 -96181497 - L1PA16 LINE L1 -9 6860 6008 2395 77 0 22 chr2 154506357 154506668 -96181186 - AluY SINE Alu 0 311 8 12022 217 32 24 chr2 154506668 154510877 -96176977 - L1PA16 LINE L1 -861 6008 2150 1676 194 0 7 chr2 154510877 154511156 -96176698 - AluJb SINE Alu -33 279 3 12022 217 32 24 chr2 154511156 154513323 -96174531 - L1PA16 LINE L1 -4719 2150 2 257 218 0 23 chr2 154513364 154513419 -96174435 + (CATATA)n Simple_repeat Simple_repeat 3 57 -30 1811 126 77 47 chr2 154513419 154513783 -96174071 - THE1C LTR MaLR 0 375 1 257 218 0 23 chr2 154513783 154513814 -96174040 + (CATATA)n Simple_repeat Simple_repeat 57 87 0 341 387 75 9 chr2 154513968 154514301 -96173553 + L1M4 LINE L1 3870 4224 -1922 342 283 75 32 chr2 154514668 154514855 -96172999 - MIR SINE MIR -3 259 65 3442 156 23 72 chr2 154515579 154516404 -96171450 - LTR1 LTR ERV1 0 785 1 237 309 22 0 chr2 154516706 154516775 -96171079 + (TA)n Simple_repeat Simple_repeat 1 67 -75 2827 197 22 0 chr2 154516775 154517313 -96170541 + MER44D DNA MER2_type 1 605 0 237 309 22 0 chr2 154517313 154517382 -96170472 + (TA)n Simple_repeat Simple_repeat 67 142 0 384 339 21 16 chr2 154517773 154517965 -96169889 - MIR SINE MIR -14 248 56 389 329 15 15 chr2 154518340 154518477 -96169377 + MIR SINE MIR 5 141 -121 211 139 0 23 chr2 154518637 154518680 -96169174 + (TTA)n Simple_repeat Simple_repeat 1 42 0 227 278 237 0 chr2 154520771 154520868 -96166986 - L2 LINE L2 0 3272 3153 265 312 133 12 chr2 154521060 154521233 -96166621 - L2 LINE L2 -622 2692 2499 214 200 0 0 chr2 154521296 154521336 -96166518 + (TA)n Simple_repeat Simple_repeat 1 40 0 1889 191 57 71 chr2 154521609 154522118 -96165736 + MLT1D LTR MaLR 2 503 -2 420 37 0 0 chr2 154522200 154522254 -96165600 + (TG)n Simple_repeat Simple_repeat 1 54 0 1561 163 3 97 chr2 154522254 154522565 -96165289 - AluJb SINE Alu -29 283 1 22 56 0 0 chr2 154522908 154522944 -96164910 + AT_rich Low_complexity Low_complexity 1 36 0 204 330 38 28 chr2 154523762 154523868 -96163986 - MIR SINE MIR -109 153 47 218 309 118 40 chr2 154523942 154524094 -96163760 - MER5B DNA MER1_type -13 165 2 423 160 14 83 chr2 154524111 154524230 -96163624 + MER5A DNA MER1_type 4 112 -77 594 247 35 17 chr2 154527753 154527927 -96159927 - LTR33 LTR ERVL -10 511 335 610 332 14 19 chr2 154527998 154528209 -96159645 - LTR33 LTR ERVL -311 210 1 1526 159 48 22 chr2 154529364 154529634 -96158220 + AluJb SINE Alu 1 277 -35 921 145 0 0 chr2 154529635 154529773 -96158081 + AluSg/x SINE Alu 166 303 -9 34 0 0 0 chr2 154529824 154529858 -96157996 + AT_rich Low_complexity Low_complexity 1 34 0 7045 151 39 31 chr2 154529860 154530320 -96157534 - L1MA8 LINE L1 -10 6281 5826 315 0 0 0 chr2 154530320 154530355 -96157499 + (TG)n Simple_repeat Simple_repeat 2 36 0 7045 151 39 31 chr2 154530355 154532234 -96155620 - L1MA8 LINE L1 -465 5826 3911 202 300 8 62 chr2 154533874 154534004 -96153850 + MIR SINE MIR 99 221 -41 404 298 113 7 chr2 154534049 154534200 -96153654 - MER5B DNA MER1_type -3 175 9 1725 156 64 0 chr2 154535200 154535482 -96152372 - AluSx SINE Alu -12 300 1 228 175 63 0 chr2 154535953 154536016 -96151838 + L1MB4 LINE L1 6112 6178 -2 21 71 0 0 chr2 154537366 154537408 -96150446 + AT_rich Low_complexity Low_complexity 1 42 0 302 297 97 32 chr2 154537744 154537899 -96149955 + MIR3 SINE MIR 20 184 -24 326 347 89 20 chr2 154537907 154538155 -96149699 + L2 LINE L2 1937 2201 -1113 233 218 18 18 chr2 154538444 154538499 -96149355 + MLT1I LTR MaLR 345 399 -10 360 187 224 8 chr2 154538651 154538785 -96149069 - L1M4 LINE L1 -2196 3950 3788 2220 122 38 78 chr2 154538813 154539264 -96148590 + Tigger2a DNA MER2_type 1 433 -1 234 336 76 23 chr2 154539326 154539457 -96148397 - MLT1I LTR MaLR -121 288 151 1622 214 107 26 chr2 154539841 154540300 -96147554 - MLT1F1 LTR MaLR 0 567 72 369 323 87 43 chr2 154540849 154541242 -96146612 - MLT1K LTR MaLR -11 577 168 4692 100 14 14 chr2 154541446 154542158 -96145696 + L1PA13 LINE L1 5451 6162 -1 1154 207 40 19 chr2 154542470 154542793 -96145061 + L1M4 LINE L1 1225 1554 -4988 1953 213 62 13 chr2 154542799 154543414 -96144440 + L1M4 LINE L1 3052 3696 -2948 379 269 88 0 chr2 154543440 154543622 -96144232 + L1ME2 LINE L1 2243 2440 -3706 956 224 58 10 chr2 154543638 154543940 -96143914 - MLT1A1 LTR MaLR -14 351 1 562 276 79 23 chr2 154543955 154544259 -96143595 + L1ME2 LINE L1 2453 2773 -3373 * 1039 229 99 66 chr2 154544229 154544807 -96143047 + L1ME2 LINE L1 5112 5705 -459 2160 100 3 3 chr2 154544807 154545106 -96142748 + AluSc SINE Alu 1 299 -10 1039 229 99 66 chr2 154545106 154545244 -96142610 + L1ME2 LINE L1 5705 5837 -327 324 319 21 7 chr2 154545290 154545434 -96142420 + L1ME2 LINE L1 5997 6142 -22 21 0 0 0 chr2 154545901 154545922 -96141932 + AT_rich Low_complexity Low_complexity 1 21 0 390 219 10 0 chr2 154546468 154546564 -96141290 + L1M4 LINE L1 4999 5095 -1051 964 290 44 61 chr2 154546673 154547197 -96140657 + MLT1K LTR MaLR 72 586 -2 441 354 35 18 chr2 154547339 154547565 -96140289 - MIR SINE MIR -13 249 20 226 305 86 9 chr2 154547523 154547628 -96140226 + MIR SINE MIR 50 162 -100 * 1487 195 11 25 chr2 154547742 154548024 -96139830 - AluJo SINE Alu -34 278 1 22 0 0 0 chr2 154548138 154548160 -96139694 + AT_rich Low_complexity Low_complexity 1 22 0 557 284 35 18 chr2 154548443 154548612 -96139242 + MER5B DNA MER1_type 6 177 -1 370 308 0 0 chr2 154548638 154548816 -96139038 + (TTCA)n Simple_repeat Simple_repeat 1 178 0 275 259 185 0 chr2 154548846 154548927 -96138927 - L2 LINE L2 -17 3296 3201 243 0 0 0 chr2 154550418 154550445 -96137409 + (TG)n Simple_repeat Simple_repeat 2 28 0 2800 142 43 2 chr2 154550471 154550957 -96136897 - L1PA16 LINE L1 -3 6478 5973 * 12580 101 13 4 chr2 154550950 154553569 -96134285 - L1PA7 LINE L1 -3 6151 3511 15736 138 19 25 chr2 154553803 154556102 -96131752 - L1PA16 LINE L1 -1971 4490 2167 2309 110 0 0 chr2 154556102 154556412 -96131442 + AluSg SINE Alu 1 310 0 15736 138 19 25 chr2 154556412 154558566 -96129288 - L1PA16 LINE L1 -4294 2167 1 9514 221 28 12 chr2 154558569 154560691 -96127163 - L1P4 LINE L1 -501 6368 4188 3048 75 51 14 chr2 154560691 154561119 -96126735 - MLT2A1 LTR ERVL 0 444 1 9514 221 28 12 chr2 154561119 154561819 -96126035 - L1P4 LINE L1 -2681 4188 3500 432 252 78 0 chr2 154561826 154561941 -96125913 - L1P4 LINE L1 -5188 1661 1538 * 5448 201 9 4 chr2 154561937 154562883 -96124971 - L1P4 LINE L1 -5896 953 3 2251 232 23 4 chr2 154563846 154564316 -96123538 - L1M2 LINE L1 -6368 481 3 370 328 35 0 chr2 154566241 154566357 -96121497 + L2 LINE L2 3153 3272 0 2601 11 0 0 chr2 154567675 154567958 -96119896 - AluYb8 SINE Alu -4 314 32 584 333 37 0 chr2 154569114 154569357 -96118497 - MIR SINE MIR -10 252 1 192 77 0 0 chr2 154569580 154569606 -96118248 + (CA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr2 154571581 154571609 -96116245 + AT_rich Low_complexity Low_complexity 1 28 0 299 154 15 0 chr2 154572123 154572188 -96115666 - L1MA3 LINE L1 0 6305 6240 1376 234 139 52 chr2 154572563 154573463 -96114391 - L1MC5 LINE L1 -78 7883 6906 28 0 0 0 chr2 154573762 154573790 -96114064 + AT_rich Low_complexity Low_complexity 1 28 0 2418 255 42 20 chr2 154573899 154574593 -96113261 - L1ME1 LINE L1 -44 6122 5414 4090 221 45 75 chr2 154574597 154574679 -96113175 - L1ME1 LINE L1 -1083 5063 4980 2350 82 3 10 chr2 154574679 154574985 -96112869 - AluY SINE Alu -7 304 1 4090 221 45 75 chr2 154574985 154576388 -96111466 - L1ME1 LINE L1 -1166 4980 3623 23 0 0 0 chr2 154576482 154576505 -96111349 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr2 154576759 154576788 -96111066 + AT_rich Low_complexity Low_complexity 1 29 0 1961 146 3 16 chr2 154576840 154577148 -96110706 - AluSx SINE Alu -8 304 1 337 234 303 14 chr2 154577333 154577478 -96110376 + MER5A DNA MER1_type 2 188 -1 1324 212 131 63 chr2 154578782 154579193 -96108661 - LTR40a LTR ERVL -1 518 80 399 289 56 28 chr2 154579366 154579546 -96108308 + MIR SINE MIR 52 236 -26 22 0 0 0 chr2 154579825 154579847 -96108007 + AT_rich Low_complexity Low_complexity 1 22 0 253 323 38 53 chr2 154581087 154581220 -96106634 - MIR SINE MIR -109 153 23 22 0 0 0 chr2 154581521 154581543 -96106311 + AT_rich Low_complexity Low_complexity 1 22 0 2938 226 54 23 chr2 154581543 154583009 -96104845 - L1ME1 LINE L1 -18 6943 5440 1401 263 84 41 chr2 154583029 154584072 -96103782 - L1ME1 LINE L1 -4905 1518 819 626 220 168 55 chr2 154584364 154584710 -96103144 - L1ME1 LINE L1 -6014 409 25 211 410 0 0 chr2 154585642 154585742 -96102112 + MIR SINE MIR 48 147 -61 2713 181 62 12 chr2 154585863 154586432 -96101422 + MER50 LTR ERV1 1 597 -137 670 169 153 16 chr2 154586434 154586609 -96101245 + L1MEc LINE L1 2261 2426 -4000 1634 128 0 0 chr2 154586609 154586851 -96101003 + L1PA12 LINE L1 5912 6153 -15 670 169 153 16 chr2 154586851 154586896 -96100958 + L1MEc LINE L1 2426 2463 -3963 694 64 0 11 chr2 154586896 154586990 -96100864 + AluSg/x SINE Alu 192 284 -26 374 242 157 7 chr2 154587024 154587177 -96100677 + L1MEc LINE L1 2508 2683 -3924 3690 147 31 48 chr2 154587213 154587947 -96099907 - MER52A LTR ERV1 0 1755 1034 1514 198 162 44 chr2 154588079 154588576 -96099278 - MER52A LTR ERV1 -1094 661 1 5599 238 54 54 chr2 154588581 154589175 -96098679 + L1MEc LINE L1 2681 3274 -3152 1995 129 13 35 chr2 154589175 154589486 -96098368 + AluSx SINE Alu 4 307 -5 5599 238 54 54 chr2 154589486 154589654 -96098200 + L1MEc LINE L1 3274 3441 -2985 1915 123 0 51 chr2 154589654 154589986 -96097868 + L1PA16 LINE L1 5842 6156 -10 5599 238 54 54 chr2 154589986 154591431 -96096423 + L1MEc LINE L1 3441 4892 -1534 2110 113 10 10 chr2 154591431 154591723 -96096131 - AluSg SINE Alu -18 292 1 5599 238 54 54 chr2 154591723 154591835 -96096019 + L1MEc LINE L1 4891 5002 -1424 2713 179 47 25 chr2 154591837 154592390 -96095464 + L1MC3 LINE L1 7137 7701 -84 332 343 84 28 chr2 154593642 154593820 -96094034 + MIR3 SINE MIR 17 204 -4 2255 84 24 0 chr2 154594089 154594386 -96093468 + AluSc SINE Alu 1 304 -5 691 280 21 63 chr2 154598521 154598807 -96089047 + Charlie8 DNA MER1_type 1 274 -2143 1757 174 15 9 chr2 154600402 154600730 -96087124 + Tigger1 DNA MER2_type 110 439 -1979 297 242 53 42 chr2 154600743 154600838 -96087016 - MER41E LTR ERV1 -59 453 358 * 1354 212 31 0 chr2 154600807 154601100 -96086754 - LTR43 LTR ERV1 -122 480 179 9091 123 15 5 chr2 154601292 154602686 -96085168 + Tigger1 DNA MER2_type 429 1836 -582 10224 159 24 11 chr2 154602695 154605763 -96082091 - L1MA3 LINE L1 -5 7719 4614 1046 126 0 0 chr2 154605763 154605906 -96081948 + LTR8 LTR ERV1 549 691 0 10323 120 47 76 chr2 154605906 154607139 -96080715 + HUERS-P1 LTR ERV1 1 1267 -4996 237 65 0 0 chr2 154607139 154607170 -96080684 + (TG)n Simple_repeat Simple_repeat 2 32 0 10323 120 47 76 chr2 154607170 154608826 -96079028 + HUERS-P1 LTR ERV1 1267 2796 -3467 5675 132 53 19 chr2 154608819 154609844 -96078010 + HUERS-P1 LTR ERV1 3224 4283 -1980 * 11569 176 23 113 chr2 154609844 154613061 -96074793 + L1PA8 LINE L1 2 2926 -3220 14703 126 17 0 chr2 154613067 154614024 -96073830 + L1PA8 LINE L1 2997 3937 -2235 2332 77 3 10 chr2 154614024 154614337 -96073517 + AluY SINE Alu 1 311 0 14703 126 17 0 chr2 154614337 154616541 -96071313 + L1PA8 LINE L1 3937 6168 -4 2376 128 2 22 chr2 154616545 154616952 -96070902 + HUERS-P1 LTR ERV1 4279 4677 -1586 10666 33 3 0 chr2 154616962 154619015 -96068839 - L1PA3 LINE L1 -4 6151 4095 5893 127 18 18 chr2 154619150 154620186 -96067668 - L1MA3 LINE L1 -4289 3276 2241 2754 77 6 0 chr2 154620788 154621141 -96066713 + THE1A LTR MaLR 1 355 0 11456 104 9 1 chr2 154621141 154622708 -96065146 + THE1A-int LTR MaLR 1 1580 0 2593 83 20 3 chr2 154622708 154623057 -96064797 + THE1A LTR MaLR 1 355 0 278 259 0 0 chr2 154623634 154623688 -96064166 + L1PA15-16 LINE L1 1317 1370 -5479 1322 197 47 7 chr2 154623962 154624236 -96063618 + AluJo SINE Alu 22 306 -6 28 71 0 0 chr2 154624236 154624292 -96063562 + AT_rich Low_complexity Low_complexity 1 56 0 181 349 0 0 chr2 154624295 154624338 -96063516 - MIR SINE MIR -117 91 49 5934 161 24 9 chr2 154624408 154626190 -96061664 - L1MA8 LINE L1 -6 6285 4477 705 169 233 72 chr2 154626184 154626217 -96061637 - L1MA8 LINE L1 -1955 4191 4165 * 180 0 0 0 chr2 154626217 154626237 -96061617 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 705 169 233 72 chr2 154626237 154626294 -96061560 - L1MA8 LINE L1 -1981 4165 4118 2180 122 0 0 chr2 154626294 154626588 -96061266 + AluSg SINE Alu 1 294 -16 705 169 233 72 chr2 154626588 154626745 -96061109 - L1MA8 LINE L1 -2028 4118 3903 951 202 11 16 chr2 154626799 154626987 -96060867 + MER5A DNA MER1_type 1 187 -2 245 313 250 6 chr2 154627017 154627193 -96060661 + MIR SINE MIR 41 259 -3 255 276 30 22 chr2 154629845 154629979 -96057875 - L1ME LINE L1 -218 5903 5769 * 931 187 45 18 chr2 154629978 154630398 -96057456 - L1MC4 LINE L1 -140 7902 7363 368 115 0 0 chr2 154630400 154630476 -96057378 - AluSc SINE Alu 0 308 233 1576 149 7 0 chr2 154630550 154630832 -96057022 + L1MA9 LINE L1 6028 6311 -1 240 35 0 0 chr2 154631524 154631553 -96056301 + (TTTTC)n Simple_repeat Simple_repeat 1 29 0 1127 107 11 0 chr2 154631555 154631732 -96056122 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1033 175 71 0 chr2 154631735 154631882 -96055972 - AluJo SINE Alu -32 280 116 210 37 0 0 chr2 154631882 154631909 -96055945 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1033 175 71 0 chr2 154631909 154631944 -96055910 - AluJo SINE Alu -196 116 85 347 24 0 0 chr2 154631944 154631986 -96055868 - AluSc SINE Alu -51 248 207 638 167 32 90 chr2 154631986 154632142 -96055712 - AluJo SINE Alu -165 147 1 24 0 0 0 chr2 154632426 154632450 -96055404 + AT_rich Low_complexity Low_complexity 1 24 0 455 330 11 22 chr2 154632667 154632846 -96055008 - MIR SINE MIR -3 259 83 694 254 132 27 chr2 154632850 154633070 -96054784 - MER45C DNA AcHobo -1 952 710 * 1199 293 42 22 chr2 154633063 154633418 -96054436 - MER45C DNA AcHobo -541 412 51 2259 120 3 0 chr2 154636292 154636600 -96051254 - AluSq SINE Alu -2 311 3 6721 210 32 7 chr2 154637227 154640092 -96047762 - L1MC1 LINE L1 -15 6318 3377 464 342 31 0 chr2 154641609 154641770 -96046084 + MIR SINE MIR 87 252 -10 277 313 215 12 chr2 154641870 154642033 -96045821 + MIR SINE MIR 26 221 -41 2382 69 0 38 chr2 154642709 154643027 -96044827 - AluY SINE Alu -4 307 2 21 71 0 0 chr2 154644594 154644636 -96043218 + AT_rich Low_complexity Low_complexity 1 42 0 374 305 152 27 chr2 154644873 154645280 -96042574 - L1ME3A LINE L1 -223 5947 5490 23 0 0 0 chr2 154645331 154645354 -96042500 + AT_rich Low_complexity Low_complexity 1 23 0 216 0 0 0 chr2 154645551 154645575 -96042279 + (A)n Simple_repeat Simple_repeat 1 24 0 816 249 48 28 chr2 154645575 154645913 -96041941 + L1MCa LINE L1 811 1315 -5101 26249 137 7 12 chr2 154645914 154652337 -96035517 + L1PA8 LINE L1 5 6485 -2 1102 288 87 47 chr2 154652366 154652640 -96035214 + L1MCa LINE L1 1346 1608 -4999 486 0 0 0 chr2 154652640 154652694 -96035160 + (CA)n Simple_repeat Simple_repeat 2 55 0 1102 288 87 47 chr2 154652694 154653295 -96034559 + L1MCa LINE L1 1608 2256 -4351 791 253 11 0 chr2 154653298 154653472 -96034382 + MLT1D LTR MaLR 6 181 -324 1082 167 20 10 chr2 154653479 154653677 -96034177 + MLT1D LTR MaLR 293 492 -13 3229 239 42 33 chr2 154653684 154654064 -96033790 + L1MCa LINE L1 2253 2628 -3798 1443 196 76 28 chr2 154654064 154654421 -96033433 + MLT1A2 LTR MaLR 1 374 0 3229 239 42 33 chr2 154654421 154655406 -96032448 + L1MCa LINE L1 2628 3597 -2829 997 275 126 59 chr2 154655440 154655962 -96031892 + MLT1F1 LTR MaLR 8 563 -4 1313 281 71 4 chr2 154655964 154656516 -96031338 + L1MCa LINE L1 3618 4206 -2220 1735 253 77 16 chr2 154657032 154657731 -96030123 + L1MCa LINE L1 4191 4932 -1494 459 324 14 29 chr2 154657731 154657938 -96029916 - HAL1 LINE L1 -1638 869 666 282 367 56 47 chr2 154658078 154658285 -96029569 - HAL1 LINE L1 -1907 600 387 2447 91 0 0 chr2 154658285 154658593 -96029261 + AluSc SINE Alu 1 308 -1 282 367 56 47 chr2 154658593 154658723 -96029131 - HAL1 LINE L1 -2120 387 260 270 81 0 0 chr2 154659052 154659089 -96028765 + (TG)n Simple_repeat Simple_repeat 2 38 0 31 26 0 0 chr2 154659231 154659269 -96028585 + AT_rich Low_complexity Low_complexity 1 38 0 236 132 0 0 chr2 154659425 154659463 -96028391 - L1M4 LINE L1 -1542 4604 4567 3907 179 57 45 chr2 154659507 154660436 -96027418 - L1MB3 LINE L1 -32 6151 5210 261 233 100 0 chr2 154660448 154660538 -96027316 - L1MEd LINE L1 -5099 1020 922 596 305 75 31 chr2 154660585 154660905 -96026949 + LTR33 LTR ERVL 97 469 -52 245 246 0 0 chr2 154661052 154661121 -96026733 - L1MB3 LINE L1 -1091 5055 4987 238 217 91 66 chr2 154661371 154661569 -96026285 - L1M4 LINE L1 -1686 4460 4258 2002 148 110 30 chr2 154661695 154662095 -96025759 - MSTB1 LTR MaLR 0 432 1 1621 189 49 43 chr2 154662871 154663241 -96024613 + MLT1B LTR MaLR 1 372 -18 2204 147 35 47 chr2 154663264 154663687 -96024167 + MSTB1 LTR MaLR 15 432 0 423 0 0 0 chr2 154664174 154664221 -96023633 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 21 0 0 0 chr2 154665054 154665075 -96022779 + AT_rich Low_complexity Low_complexity 1 21 0 240 381 89 60 chr2 154665677 154665992 -96021862 - L2 LINE L2 0 3272 2949 1324 173 0 4 chr2 154666013 154666238 -96021616 - MER2 DNA MER2_type 0 345 122 790 216 14 0 chr2 154666238 154666386 -96021468 + FRAM SINE Alu 1 150 -26 632 145 22 36 chr2 154666398 154666536 -96021318 - MER2 DNA MER2_type -209 136 1 35 41 0 0 chr2 154666700 154666749 -96021105 + AT_rich Low_complexity Low_complexity 1 49 0 1640 149 16 42 chr2 154666849 154667157 -96020697 - AluJb SINE Alu -12 300 1 298 284 28 37 chr2 154667233 154667342 -96020512 - MLT1I LTR MaLR -301 108 1 2445 103 106 8 chr2 154668115 154668512 -96019342 - L1PA16 LINE L1 -2 6164 5729 23 33 0 0 chr2 154668924 154668954 -96018900 + AT_rich Low_complexity Low_complexity 1 30 0 667 239 57 79 chr2 154670369 154670649 -96017205 - Charlie8 DNA MER1_type -2143 274 1 5310 98 8 27 chr2 154670952 154671772 -96016082 + L1MA2 LINE L1 5500 6304 0 242 203 0 16 chr2 154673920 154673984 -96013870 + G-rich Low_complexity Low_complexity 4 66 0 461 348 22 6 chr2 154674517 154674698 -96013156 - MIR3 SINE MIR -4 204 21 277 255 10 69 chr2 154675698 154675800 -96012054 + MIR SINE MIR 82 177 -85 4116 68 2 0 chr2 154675848 154676381 -96011473 + L1PA7 LINE L1 5619 6152 -2 669 309 44 63 chr2 154676641 154677007 -96010847 - L2 LINE L2 -5 3308 2950 934 239 59 0 chr2 154677012 154677251 -96010603 - L2 LINE L2 -474 2840 2588 23 0 0 0 chr2 154677736 154677759 -96010095 + AT_rich Low_complexity Low_complexity 1 23 0 29 60 0 0 chr2 154677863 154677913 -96009941 + AT_rich Low_complexity Low_complexity 1 50 0 236 172 62 31 chr2 154677925 154678053 -96009801 + (TA)n Simple_repeat Simple_repeat 1 132 0 703 216 0 14 chr2 154678446 154678585 -96009269 - MLT2D LTR ERVL -105 309 173 1738 214 20 6 chr2 154678676 154679027 -96008827 + MLT1A1 LTR MaLR 10 365 0 281 281 12 12 chr2 154679263 154679345 -96008509 + MLT1I LTR MaLR 15 96 -313 233 247 39 0 chr2 154679407 154679484 -96008370 - MLT1E2 LTR MaLR 0 626 547 * 2000 189 12 34 chr2 154679483 154679857 -96007997 + MLT2D LTR ERVL 7 373 -41 396 0 0 0 chr2 154679857 154679901 -96007953 + (CA)n Simple_repeat Simple_repeat 2 45 0 2000 189 12 34 chr2 154679901 154679943 -96007911 + MLT2D LTR ERVL 373 414 0 655 220 17 0 chr2 154679943 154680061 -96007793 + MLT1I LTR MaLR 99 218 -191 322 287 56 9 chr2 154680087 154680195 -96007659 + MLT1I LTR MaLR 278 390 -19 1087 275 83 57 chr2 154680664 154681242 -96006612 - MLT1E LTR MaLR 0 593 1 1103 234 5 0 chr2 154681814 154682036 -96005818 - MER58A DNA MER1_type 0 224 2 368 259 12 12 chr2 154682127 154682212 -96005642 - L2 LINE L2 -38 3275 3191 42474 38 21 1 chr2 154683831 154689862 -95997992 - L1PA2 LINE L1 0 6155 4 289 280 107 79 chr2 154690106 154690396 -95997458 + MLT1L LTR MaLR 282 609 -6 28 48 0 0 chr2 154692217 154692259 -95995595 + AT_rich Low_complexity Low_complexity 1 42 0 1825 166 0 13 chr2 154692315 154692617 -95995237 - AluSx SINE Alu -14 298 1 997 200 17 0 chr2 154693028 154693208 -95994646 + MER5A DNA MER1_type 7 189 0 207 167 0 0 chr2 154694334 154694376 -95993478 + GA-rich Low_complexity Low_complexity 2 43 0 244 44 67 0 chr2 154694540 154694585 -95993269 + T-rich Low_complexity Low_complexity 1 48 0 1805 164 21 54 chr2 154694665 154695197 -95992657 + MLT2A2 LTR ERVL 1 413 -40 382 81 0 54 chr2 154695199 154695273 -95992581 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 387 91 0 0 chr2 154695288 154695343 -95992511 + MLT2A2 LTR ERVL 399 453 0 397 281 61 61 chr2 154695738 154696001 -95991853 + HAL1b LINE L1 217 482 -866 1458 171 20 53 chr2 154696001 154696305 -95991549 - AluJb SINE Alu -18 294 1 397 281 61 61 chr2 154696305 154696336 -95991518 + HAL1b LINE L1 481 511 -837 268 24 49 0 chr2 154696784 154696825 -95991029 + (GA)n Simple_repeat Simple_repeat 2 44 0 1157 201 88 0 chr2 154696825 154697064 -95990790 - AluJo SINE Alu -51 261 2 213 39 0 0 chr2 154697064 154697090 -95990764 + (TA)n Simple_repeat Simple_repeat 2 27 0 301 317 73 41 chr2 154697142 154697265 -95990589 - L2 LINE L2 0 3313 3187 2614 83 103 17 chr2 154697735 154698144 -95989710 + MLT2A1 LTR ERVL 1 444 0 380 270 27 61 chr2 154698190 154698338 -95989516 + MIR SINE MIR 50 192 -70 325 303 91 43 chr2 154698805 154699013 -95988841 - LTR33 LTR ERVL -5 516 299 423 280 104 5 chr2 154699063 154699256 -95988598 - LTR33 LTR ERVL -297 224 13 2231 117 0 3 chr2 154700003 154700311 -95987543 + AluSg SINE Alu 1 307 -3 228 346 0 0 chr2 154701513 154701617 -95986237 + L1MB1 LINE L1 5825 5928 -193 512 250 34 14 chr2 154702608 154702756 -95985098 - L2 LINE L2 0 3313 3163 263 203 31 16 chr2 154702760 154702824 -95985030 - MER69 DNA AcHobo -9 2517 2453 1697 299 75 55 chr2 154702862 154703915 -95983939 - L2 LINE L2 -161 3152 2077 1751 201 61 6 chr2 154703916 154704344 -95983510 + MLT1D LTR MaLR 1 505 0 1010 204 15 58 chr2 154704344 154704618 -95983236 - L2 LINE L2 -1234 2080 1819 976 158 0 0 chr2 154704618 154704770 -95983084 + AluJb SINE Alu 135 286 -26 1489 196 156 50 chr2 154704895 154704950 -95982904 + L1MD2 LINE L1 5786 5834 -525 2335 104 59 0 chr2 154704950 154705304 -95982550 - THE1C LTR MaLR 0 375 1 1489 196 156 50 chr2 154705304 154705753 -95982101 + L1MD2 LINE L1 5834 6344 -15 348 272 53 42 chr2 154705764 154706047 -95981807 + L1ME3A LINE L1 2142 2427 -3719 474 151 11 11 chr2 154706098 154706191 -95981663 + L1MB4 LINE L1 6087 6179 -1 22 0 0 0 chr2 154706384 154706406 -95981448 + AT_rich Low_complexity Low_complexity 1 22 0 446 276 28 63 chr2 154707990 154708291 -95979563 + L1ME3A LINE L1 2879 3164 -2982 855 173 56 0 chr2 154708291 154708470 -95979384 + L1MB1 LINE L1 5980 6168 0 446 276 28 63 chr2 154708470 154708563 -95979291 + L1ME3A LINE L1 3164 3259 -2887 22 56 0 0 chr2 154708612 154708648 -95979206 + AT_rich Low_complexity Low_complexity 1 36 0 213 237 17 0 chr2 154708750 154708809 -95979045 + (CAA)n Simple_repeat Simple_repeat 3 62 0 310 289 163 40 chr2 154708971 154708992 -95978862 + L1ME3A LINE L1 3690 3707 -2439 21 36 0 0 chr2 154708992 154709020 -95978834 + AT_rich Low_complexity Low_complexity 1 28 0 310 289 163 40 chr2 154709020 154709924 -95977930 + L1ME3A LINE L1 3707 4759 -1387 500 290 99 45 chr2 154710321 154710956 -95976898 + L1ME3A LINE L1 5264 5932 -238 25 0 0 0 chr2 154711221 154711246 -95976608 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 154711676 154711699 -95976155 + AT_rich Low_complexity Low_complexity 1 23 0 211 294 99 70 chr2 154713673 154713874 -95973980 + L2 LINE L2 3095 3301 -12 1848 167 43 35 chr2 154714099 154714471 -95973383 - MSTB LTR MaLR -51 375 1 22 35 0 0 chr2 154715568 154715597 -95972257 + AT_rich Low_complexity Low_complexity 1 29 0 258 32 0 0 chr2 154716433 154716464 -95971390 + (GA)n Simple_repeat Simple_repeat 2 32 0 2330 90 10 0 chr2 154716778 154717078 -95970776 + AluSg SINE Alu 1 303 -7 239 246 18 0 chr2 154718876 154718933 -95968921 + (CA)n Simple_repeat Simple_repeat 2 59 0 43400 43 3 1 chr2 154719739 154725866 -95961988 - L1PA4 LINE L1 -3 6152 10 12838 107 8 1 chr2 154725886 154728524 -95959330 - L1PA7 LINE L1 -16 6453 3790 5808 124 4 2 chr2 154728524 154729356 -95958498 - L1PA7 LINE L1 -5565 896 64 2140 118 14 0 chr2 154729548 154729837 -95958017 + AluSq SINE Alu 1 293 -20 443 195 31 0 chr2 154729961 154730089 -95957765 + (TCTA)n Simple_repeat Simple_repeat 3 134 0 234 156 0 0 chr2 154730106 154730151 -95957703 + (CCTA)n Simple_repeat Simple_repeat 1 45 0 198 103 0 0 chr2 154730259 154730288 -95957566 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1337 263 111 11 chr2 154730558 154731083 -95956771 - L1ME1 LINE L1 -218 5948 5372 29 28 0 0 chr2 154731238 154731274 -95956580 + AT_rich Low_complexity Low_complexity 1 36 0 1825 161 3 3 chr2 154731296 154731582 -95956272 - AluJb SINE Alu -23 289 4 266 278 41 10 chr2 154731700 154731797 -95956057 + L1M4 LINE L1 4029 4128 -2018 271 333 237 5 chr2 154732240 154732438 -95955416 - MIR SINE MIR -16 246 3 348 267 0 0 chr2 154732625 154732700 -95955154 - MER112 DNA MER1_type -8 252 178 227 283 0 0 chr2 154733091 154733137 -95954717 + L2 LINE L2 3252 3297 -16 884 196 17 17 chr2 154734703 154734876 -95952978 + MLT1A2 LTR MaLR 1 173 -201 300 209 0 0 chr2 154734887 154734978 -95952876 + CT-rich Low_complexity Low_complexity 1 91 0 989 165 11 16 chr2 154734999 154735181 -95952673 + MLT1A2 LTR MaLR 189 369 -5 550 254 84 75 chr2 154735205 154735497 -95952357 + LTR33A LTR ERVL 138 435 -88 1262 162 28 114 chr2 154735497 154735893 -95951961 - MLT1A1 LTR MaLR 0 365 4 550 254 84 75 chr2 154735893 154735947 -95951907 + LTR33A LTR ERVL 435 487 -36 23 92 0 0 chr2 154737012 154737077 -95950777 + AT_rich Low_complexity Low_complexity 1 65 0 1236 153 16 0 chr2 154738212 154738402 -95949452 + AluSg/x SINE Alu 107 299 -13 5027 143 32 8 chr2 154738521 154740172 -95947682 + L1PA16 LINE L1 4480 6157 -9 473 329 12 6 chr2 154740320 154740487 -95947367 + L2 LINE L2 2249 2416 -898 468 263 0 17 chr2 154741233 154741351 -95946503 - LTR28 LTR ERV1 0 1020 905 1312 233 176 99 chr2 154741393 154742192 -95945662 - LTR28 LTR ERV1 -38 982 1 782 276 60 5 chr2 154742520 154742737 -95945117 - MIR SINE MIR -19 243 15 363 304 120 28 chr2 154743405 154743622 -95944232 - MIR SINE MIR -2 260 24 278 319 115 87 chr2 154743818 154744649 -95943205 + L2 LINE L2 2420 3272 0 570 191 38 23 chr2 154745243 154745374 -95942480 + FLAM_A SINE Alu 1 133 0 322 286 101 28 chr2 154746220 154746398 -95941456 - L1MC4a LINE L1 -1918 5890 5700 1385 374 63 24 chr2 154751952 154752772 -95935082 - L3 LINE CR1 -11 1566 715 246 267 200 17 chr2 154752765 154752885 -95934969 + MIR SINE MIR 107 248 -14 * 180 255 20 0 chr2 154753461 154753512 -95934342 + MIR SINE MIR 78 129 -133 197 349 48 0 chr2 154753945 154754008 -95933846 - L2 LINE L2 -9 3263 3198 286 253 42 63 chr2 154755986 154756081 -95931773 + MIR SINE MIR 32 124 -84 519 265 247 62 chr2 154756298 154756638 -95931216 + MLT1K LTR MaLR 184 586 -2 2465 60 0 12 chr2 154758786 154759105 -95928749 + L1PA7 LINE L1 5838 6152 -2 26 0 0 0 chr2 154759259 154759285 -95928569 + AT_rich Low_complexity Low_complexity 1 26 0 321 135 0 0 chr2 154765242 154765294 -95922560 + (GGAA)n Simple_repeat Simple_repeat 2 53 0 205 296 42 0 chr2 154765792 154765863 -95921991 + CT-rich Low_complexity Low_complexity 2 75 0 845 123 55 0 chr2 154765921 154766067 -95921787 + L1MA6 LINE L1 6147 6300 0 21 36 0 0 chr2 154767823 154767851 -95920003 + AT_rich Low_complexity Low_complexity 1 28 0 459 236 92 72 chr2 154768311 154768364 -95919490 + MIR SINE MIR 46 96 -166 2110 127 3 3 chr2 154768364 154768671 -95919183 - AluSx SINE Alu -5 307 1 459 236 92 72 chr2 154768671 154768812 -95919042 + MIR SINE MIR 96 244 -18 3477 143 38 23 chr2 154768987 154769309 -95918545 + L1MB4 LINE L1 5505 5821 -359 2350 97 7 0 chr2 154769309 154769617 -95918237 - AluSp SINE Alu -3 310 1 3477 143 38 23 chr2 154769617 154769958 -95917896 + L1MB4 LINE L1 5821 6178 -2 256 313 104 24 chr2 154770127 154770501 -95917353 - L1ME4a LINE L1 -205 5916 5513 604 273 23 11 chr2 154770518 154770694 -95917160 + MER5B DNA MER1_type 1 178 0 1942 138 23 13 chr2 154771522 154771827 -95916027 + AluJo SINE Alu 1 308 -4 2126 120 17 3 chr2 154771836 154772136 -95915718 - AluSg SINE Alu -6 304 1 414 316 138 37 chr2 154773357 154773654 -95914200 - L2 LINE L2 -4 3268 2942 316 292 22 36 chr2 154773734 154773871 -95913983 - L2 LINE L2 -493 2821 2687 542 193 140 54 chr2 154774646 154774895 -95912959 + MLT1A1 LTR MaLR 1 332 -64 1690 147 7 14 chr2 154774895 154775181 -95912673 + L1PB4 LINE L1 5865 6148 -8 468 111 0 0 chr2 154775229 154775301 -95912553 + MLT1A1 LTR MaLR 323 394 -2 560 196 31 0 chr2 154775785 154775882 -95911972 + FRAM SINE Alu 46 145 -31 318 26 0 0 chr2 154775883 154775922 -95911932 + (CA)n Simple_repeat Simple_repeat 2 40 0 1289 178 5 0 chr2 154776273 154776487 -95911367 - AluSg/x SINE Alu -2 310 96 2265 120 0 0 chr2 154776580 154776880 -95910974 + AluSx SINE Alu 1 300 -12 1957 121 11 0 chr2 154777497 154777820 -95910034 - AluSx SINE Alu 0 326 1 2089 250 92 33 chr2 154778601 154779743 -95908111 + L1ME2 LINE L1 2635 3843 -2303 547 231 25 0 chr2 154779764 154779885 -95907969 - MSTB LTR MaLR 0 426 303 1484 269 92 23 chr2 154779939 154780933 -95906921 + L1ME2 LINE L1 4386 5454 -724 717 217 32 0 chr2 154781015 154781172 -95906682 + L1ME2 LINE L1 5454 5615 -551 277 125 0 0 chr2 154781176 154781255 -95906599 + Alu SINE Alu 247 325 0 787 235 58 77 chr2 154781272 154781753 -95906101 + L1ME2 LINE L1 5629 6100 -64 2235 125 0 25 chr2 154782606 154782926 -95904928 + AluSx SINE Alu 1 312 0 250 248 62 47 chr2 154782961 154783090 -95904764 - MER103 DNA DNA -35 131 1 2533 83 0 0 chr2 154783427 154783739 -95904115 - AluSx SINE Alu 0 312 1 6140 183 188 33 chr2 154784162 154784753 -95903101 - MER52A LTR ERV1 0 1755 1257 2227 63 7 17 chr2 154784753 154785052 -95902802 - AluY SINE Alu -15 296 1 6140 183 188 33 chr2 154785052 154785980 -95901874 - MER52A LTR ERV1 -498 1257 1 1909 200 14 13 chr2 154785981 154786573 -95901281 - MER52A-int LTR ERV1 -4 6992 3684 * 2686 132 28 55 chr2 154786570 154787203 -95900651 - MER52A-int LTR ERV1 -2279 5537 2226 2135 139 0 0 chr2 154787224 154787533 -95900321 - AluSx SINE Alu -3 309 1 1934 121 9 9 chr2 154787534 154787849 -95900005 - MER52A-int LTR ERV1 -3742 2204 1890 454 136 49 0 chr2 154787858 154787939 -95899915 - MER52A-int LTR ERV1 -4805 1141 1057 23 0 0 0 chr2 154787941 154787964 -95899890 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 154787971 154787995 -95899859 + AT_rich Low_complexity Low_complexity 1 24 0 12599 176 36 14 chr2 154787995 154789333 -95898521 - L1PB1 LINE L1 -2 6865 5557 2025 139 0 26 chr2 154789333 154789642 -95898212 - AluSx SINE Alu -11 301 1 12599 176 36 14 chr2 154789642 154793172 -95894682 - L1PB1 LINE L1 -1310 5557 1699 2082 144 3 0 chr2 154793172 154793478 -95894376 - AluSc SINE Alu 0 309 3 12599 176 36 14 chr2 154793478 154794565 -95893289 - L1PB1 LINE L1 -5168 1699 637 1058 157 10 0 chr2 154794568 154794766 -95893088 - L1PB1 LINE L1 -6663 200 1 355 118 26 53 chr2 154794781 154794857 -95892997 - MER61-int LTR ERV1 -4883 1063 990 550 176 0 32 chr2 154794914 154795039 -95892815 - MER61-int LTR ERV1 -463 4754 4634 620 220 306 0 chr2 154795040 154795331 -95892523 - MER52A LTR ERV1 -1375 380 1 21 36 0 0 chr2 154795370 154795398 -95892456 + AT_rich Low_complexity Low_complexity 1 28 0 351 305 183 0 chr2 154796251 154796382 -95891472 - L2 LINE L2 0 3313 3159 557 204 21 120 chr2 154796448 154796639 -95891215 - MER5B DNA MER1_type 0 178 7 2874 273 104 64 chr2 154796655 154798305 -95889549 - L2 LINE L2 -1208 2106 391 920 276 51 28 chr2 154798359 154798613 -95889241 + MIR SINE MIR 2 261 -1 183 80 0 0 chr2 154798658 154798683 -95889171 + (TTA)n Simple_repeat Simple_repeat 1 25 0 256 167 13 26 chr2 154798951 154799029 -95888825 + L1MC4a LINE L1 6927 7003 -805 401 294 95 29 chr2 154800018 154800324 -95887530 - L1MEd LINE L1 -5012 1107 782 269 300 62 53 chr2 154801064 154801291 -95886563 + L2 LINE L2 2737 2965 -349 381 340 117 75 chr2 154801370 154801782 -95886072 - L2 LINE L2 -2 3270 2842 325 271 93 16 chr2 154801872 154802001 -95885853 - L2 LINE L2 -602 2712 2574 309 286 81 61 chr2 154802321 154802618 -95885236 - L2 LINE L2 -1761 1553 1251 953 312 111 36 chr2 154803127 154804615 -95883239 + L1M4 LINE L1 2218 3871 -2275 485 301 115 2 chr2 154804616 154805024 -95882830 + L1M4 LINE L1 3895 4348 -1798 21912 39 1 1 chr2 154807250 154811531 -95876323 - L1PA5 LINE L1 -9 6145 1860 290 133 22 0 chr2 154811529 154811574 -95876280 + L1P LINE L1 857 902 -5244 * 805 182 18 12 chr2 154811776 154811946 -95875908 + L1MB1 LINE L1 5996 6166 -2 22 0 0 0 chr2 154812985 154813007 -95874847 + AT_rich Low_complexity Low_complexity 1 22 0 2038 117 21 0 chr2 154813126 154813409 -95874445 + AluSx SINE Alu 10 298 -14 231 217 0 0 chr2 154813742 154813802 -95874052 + (TA)n Simple_repeat Simple_repeat 2 61 0 732 308 98 11 chr2 154813914 154814200 -95873654 - LTR16A LTR ERVL 0 450 140 317 207 35 35 chr2 154814201 154814317 -95873537 + L1MC5 LINE L1 7649 7764 -197 264 245 0 0 chr2 154814332 154814395 -95873459 + L1MC4a LINE L1 6858 6911 -897 723 225 102 104 chr2 154814510 154815257 -95872597 + L1MC5 LINE L1 7001 7745 -216 247 231 77 0 chr2 154815349 154815414 -95872440 - MER2 DNA MER2_type -7 338 269 24 0 0 0 chr2 154816482 154816506 -95871348 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 154816587 154816611 -95871243 + AT_rich Low_complexity Low_complexity 1 24 0 255 254 76 85 chr2 154816942 154817060 -95870794 - MIR SINE MIR -60 148 50 22 0 0 0 chr2 154817993 154818015 -95869839 + AT_rich Low_complexity Low_complexity 1 22 0 318 309 148 29 chr2 154818059 154818337 -95869517 + MARNA DNA Mariner 22 332 -254 2649 220 16 2 chr2 154818391 154818901 -95868953 + L1MA1 LINE L1 1188 1704 -5861 238 309 64 0 chr2 154818999 154819109 -95868745 + MARNA DNA Mariner 432 548 -38 13503 168 26 39 chr2 154819139 154819838 -95868016 + L1MA1 LINE L1 1756 2463 -5110 2025 161 0 0 chr2 154819838 154820136 -95867718 + AluSx SINE Alu 1 298 -14 13503 168 26 39 chr2 154820136 154824521 -95863333 + L1MA1 LINE L1 2463 6768 -805 4797 130 32 15 chr2 154824549 154825402 -95862452 + L1MA1 LINE L1 6747 7613 -108 1935 298 101 26 chr2 154825515 154826042 -95861812 + L2 LINE L2 552 1171 -2143 387 0 0 0 chr2 154826042 154826085 -95861769 + (CAAAA)n Simple_repeat Simple_repeat 1 43 0 1935 298 101 26 chr2 154826085 154826427 -95861427 + L2 LINE L2 1171 1486 -1828 733 292 216 19 chr2 154826486 154826960 -95860894 + L2 LINE L2 2584 3127 -186 196 365 14 14 chr2 154826966 154827040 -95860814 - L2 LINE L2 -29 3243 3170 415 342 133 10 chr2 154827831 154828132 -95859722 - L3b LINE CR1 -131 1452 1115 210 143 0 0 chr2 154829442 154829477 -95858377 + (TA)n Simple_repeat Simple_repeat 2 36 0 230 75 0 0 chr2 154829477 154829517 -95858337 - LTR66 LTR ERVL -171 439 400 191 368 39 65 chr2 154829900 154830055 -95857799 + MIR SINE MIR 102 252 -10 2283 94 0 0 chr2 154830058 154830344 -95857510 + AluSg SINE Alu 1 286 -24 6755 60 11 0 chr2 154830446 154831547 -95856307 - L1PA5 LINE L1 -16 6138 5034 2398 177 28 72 chr2 154831810 154832351 -95855503 - L1MC2 LINE L1 -3 6341 5831 1932 137 0 27 chr2 154832351 154832679 -95855175 - AluSq SINE Alu 0 321 2 2398 177 28 72 chr2 154832679 154832787 -95855067 - L1MC2 LINE L1 -513 5831 5720 207 0 0 0 chr2 154834163 154834186 -95853668 + (T)n Simple_repeat Simple_repeat 1 23 0 401 45 76 0 chr2 154834286 154834352 -95853502 + L1MA1 LINE L1 6232 6302 0 187 186 0 29 chr2 154834671 154834741 -95853113 + (TAA)n Simple_repeat Simple_repeat 3 70 0 233 222 19 0 chr2 154834793 154834847 -95853007 - MIR SINE MIR -73 189 135 23 33 0 0 chr2 154834869 154834899 -95852955 + AT_rich Low_complexity Low_complexity 1 30 0 1470 58 5 0 chr2 154835068 154835257 -95852597 - L1PA5 LINE L1 0 6154 5965 1549 27 0 0 chr2 154835257 154835441 -95852413 + L1PA5 LINE L1 5794 5977 -177 381 266 49 35 chr2 154835954 154836097 -95851757 - MLT1L LTR MaLR 0 615 471 1880 121 11 25 chr2 154836626 154836947 -95850907 - L1PA8 LINE L1 -453 5719 5448 3574 59 0 0 chr2 154836947 154837403 -95850451 + L1PA8 LINE L1 5716 6172 0 734 225 7 20 chr2 154837539 154837690 -95850164 - MER2 DNA MER2_type -195 150 2 322 272 104 32 chr2 154837715 154837840 -95850014 + L2 LINE L2 3179 3312 -1 187 380 25 0 chr2 154838957 154839036 -95848818 - L2 LINE L2 -8 3305 3225 282 193 0 0 chr2 154839129 154839186 -95848668 + (TG)n Simple_repeat Simple_repeat 1 57 0 204 364 91 27 chr2 154839249 154839359 -95848495 + L2 LINE L2 3148 3264 -8 518 290 21 38 chr2 154840205 154840391 -95847463 - MIR SINE MIR -21 241 59 808 341 104 0 chr2 154841163 154841527 -95846327 - L2 LINE L2 -2879 435 34 1623 183 10 14 chr2 154841983 154842273 -95845581 + AluJb SINE Alu 1 289 -23 26 50 0 0 chr2 154843311 154843351 -95844503 + AT_rich Low_complexity Low_complexity 1 40 0 302 217 142 17 chr2 154843924 154844044 -95843810 + L1M4 LINE L1 2218 2352 -3794 298 98 0 0 chr2 154845943 154845984 -95841870 + L2 LINE L2 3265 3305 -8 361 293 5 2 chr2 154846064 154846248 -95841606 + MER58 DNA MER1_type 1 2420 0 943 289 26 32 chr2 154846362 154846739 -95841115 + MLT1L LTR MaLR 231 605 -10 557 101 0 0 chr2 154846968 154847047 -95840807 - MADE1 DNA Mariner -1 79 1 304 333 46 0 chr2 154847679 154847787 -95840067 - MIR3 SINE MIR -49 159 47 424 297 74 63 chr2 154848001 154848270 -95839584 + MLT1I LTR MaLR 98 369 -40 228 175 38 38 chr2 154848271 154848351 -95839503 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 495 323 100 40 chr2 154848356 154848917 -95838937 + L2 LINE L2 2644 3283 -30 22 0 0 0 chr2 154849083 154849105 -95838749 + AT_rich Low_complexity Low_complexity 1 22 0 355 127 0 18 chr2 154849105 154849160 -95838694 - MER66B LTR ERV1 -140 346 293 252 272 78 94 chr2 154849964 154850155 -95837699 + Charlie8 DNA MER1_type 2 189 -2228 288 294 53 25 chr2 154850657 154850830 -95837024 - L1MC/D LINE L1 -354 5767 5587 1007 350 19 16 chr2 154850847 154851279 -95836575 + LTR16A LTR ERVL 17 449 -1 3556 143 98 20 chr2 154852768 154853454 -95834400 - MER11B LTR ERVK -326 910 172 5539 26 3 0 chr2 154853554 154854543 -95833311 - L1P1 LINE L1 -441 5714 4723 11224 36 6 1 chr2 154854550 154855926 -95831928 + L1P LINE L1 3277 4658 -1488 2301 269 36 27 chr2 154856035 154856701 -95831153 - L1PA13 LINE L1 -6011 776 105 1184 259 51 6 chr2 154856935 154857290 -95830564 - ERVL LTR ERVL -421 5343 4973 372 211 265 25 chr2 154857338 154857533 -95830321 - MLT1G LTR MaLR 0 590 299 1230 53 0 7 chr2 154857533 154857684 -95830170 + MER11B LTR ERVK 1 150 -1086 1781 209 0 9 chr2 154857787 154858136 -95829718 + MER52A LTR ERV1 1410 1755 0 2306 84 3 10 chr2 154858575 154858884 -95828970 + AluSx SINE Alu 6 312 0 1618 197 3 0 chr2 154858995 154859475 -95828379 + L1PA13 LINE L1 1275 1801 -4986 26 0 0 0 chr2 154864324 154864350 -95823504 + AT_rich Low_complexity Low_complexity 1 26 0 2465 60 0 12 chr2 154864504 154864823 -95823031 - L1PA7 LINE L1 -2 6152 5838 519 265 247 62 chr2 154866971 154867311 -95820543 - MLT1K LTR MaLR -2 586 184 286 253 42 63 chr2 154867528 154867623 -95820231 - MIR SINE MIR -84 124 32 197 349 48 0 chr2 154869601 154869664 -95818190 + L2 LINE L2 3198 3263 -9 180 255 20 0 chr2 154870097 154870148 -95817706 - MIR SINE MIR -133 129 78 246 267 200 17 chr2 154870724 154870844 -95817010 - MIR SINE MIR -14 248 107 * 1385 374 63 24 chr2 154870837 154871657 -95816197 + L3 LINE CR1 715 1566 -11 322 286 101 28 chr2 154877212 154877390 -95810464 + L1MC4a LINE L1 5700 5890 -1918 570 191 38 23 chr2 154878236 154878367 -95809487 - FLAM_A SINE Alu 0 133 1 276 318 117 87 chr2 154878961 154879790 -95808064 - L2 LINE L2 0 3272 2420 363 304 120 28 chr2 154879986 154880203 -95807651 + MIR SINE MIR 24 260 -2 782 276 60 5 chr2 154880871 154881088 -95806766 + MIR SINE MIR 15 243 -19 1312 233 176 99 chr2 154881416 154882215 -95805639 + LTR28 LTR ERV1 1 982 -38 468 263 0 17 chr2 154882257 154882375 -95805479 + LTR28 LTR ERV1 905 1020 0 473 329 12 6 chr2 154883121 154883288 -95804566 - L2 LINE L2 -898 2416 2249 5027 143 15 4 chr2 154883436 154885087 -95802767 - L1PA16 LINE L1 -9 6157 4480 1236 153 16 0 chr2 154885206 154885396 -95802458 - AluSg/x SINE Alu -13 299 107 23 92 0 0 chr2 154886531 154886596 -95801258 + AT_rich Low_complexity Low_complexity 1 65 0 550 254 84 75 chr2 154887661 154887715 -95800139 - LTR33A LTR ERVL -36 487 435 1262 162 28 114 chr2 154887715 154888111 -95799743 + MLT1A1 LTR MaLR 4 365 0 550 254 84 75 chr2 154888111 154888403 -95799451 - LTR33A LTR ERVL -88 435 138 989 165 11 16 chr2 154888427 154888609 -95799245 - MLT1A2 LTR MaLR -5 369 189 300 209 0 0 chr2 154888630 154888721 -95799133 + GA-rich Low_complexity Low_complexity 1 91 0 884 196 17 17 chr2 154888732 154888905 -95798949 - MLT1A2 LTR MaLR -201 173 1 227 283 0 0 chr2 154890471 154890517 -95797337 - L2 LINE L2 -16 3297 3252 348 267 0 0 chr2 154890908 154890983 -95796871 + MER112 DNA MER1_type 178 252 -8 271 333 237 5 chr2 154891170 154891368 -95796486 + MIR SINE MIR 3 246 -16 266 278 41 10 chr2 154891811 154891908 -95795946 - L1M4 LINE L1 -2018 4128 4029 1825 161 3 3 chr2 154892026 154892312 -95795542 + AluJb SINE Alu 4 289 -23 29 28 0 0 chr2 154892334 154892370 -95795484 + AT_rich Low_complexity Low_complexity 1 36 0 1337 263 111 11 chr2 154892525 154893050 -95794804 + L1ME1 LINE L1 5372 5948 -218 198 103 0 0 chr2 154893320 154893349 -95794505 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 234 156 0 0 chr2 154893457 154893502 -95794352 + (TAGG)n Simple_repeat Simple_repeat 1 45 0 443 195 31 0 chr2 154893519 154893647 -95794207 + (TAGA)n Simple_repeat Simple_repeat 3 134 0 2140 118 14 0 chr2 154893771 154894060 -95793794 - AluSq SINE Alu -20 293 1 5808 124 4 2 chr2 154894252 154895084 -95792770 + L1PA7 LINE L1 64 896 -5565 12863 106 18 1 chr2 154895084 154897722 -95790132 + L1PA7 LINE L1 3790 6453 -16 43384 43 3 1 chr2 154897742 154903869 -95783985 + L1PA4 LINE L1 10 6152 -3 239 246 18 0 chr2 154904675 154904732 -95783122 + (TG)n Simple_repeat Simple_repeat 2 59 0 2401 86 7 0 chr2 154906530 154906831 -95781023 - AluSg SINE Alu -7 303 1 258 32 0 0 chr2 154907145 154907176 -95780678 + (TC)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr2 154908012 154908041 -95779813 + AT_rich Low_complexity Low_complexity 1 29 0 1818 166 43 38 chr2 154909138 154909511 -95778343 + MSTB LTR MaLR 1 375 -51 211 294 99 70 chr2 154909736 154909937 -95777917 - L2 LINE L2 -12 3301 3095 23 0 0 0 chr2 154911911 154911934 -95775920 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 154912364 154912389 -95775465 + AT_rich Low_complexity Low_complexity 1 25 0 369 302 75 39 chr2 154912654 154913227 -95774627 - L1ME3A LINE L1 -238 5932 5338 301 301 154 9 chr2 154913686 154914440 -95773414 - L1ME3A LINE L1 -1387 4759 3885 21 36 0 0 chr2 154914590 154914618 -95773236 + AT_rich Low_complexity Low_complexity 1 28 0 213 237 17 0 chr2 154914801 154914860 -95772994 + (TTG)n Simple_repeat Simple_repeat 3 62 0 22 56 0 0 chr2 154914962 154914998 -95772856 + AT_rich Low_complexity Low_complexity 1 36 0 376 276 28 63 chr2 154915047 154915140 -95772714 - L1ME3A LINE L1 -2887 3259 3164 844 173 56 0 chr2 154915140 154915319 -95772535 - L1MB1 LINE L1 0 6168 5980 376 276 28 63 chr2 154915319 154915620 -95772234 - L1ME3A LINE L1 -2982 3164 2879 22 0 0 0 chr2 154917205 154917227 -95770627 + AT_rich Low_complexity Low_complexity 1 22 0 467 155 10 29 chr2 154917420 154917523 -95770331 - L1MB4 LINE L1 -1 6179 6079 279 264 58 43 chr2 154917564 154917841 -95770013 - L1ME3A LINE L1 -3719 2427 2147 1345 198 134 51 chr2 154917858 154918307 -95769547 - L1MD2 LINE L1 -15 6344 5849 2342 104 59 0 chr2 154918307 154918661 -95769193 + THE1C LTR MaLR 1 375 0 1345 198 134 51 chr2 154918661 154918702 -95769152 - L1MD2 LINE L1 -510 5849 5813 965 158 0 0 chr2 154918841 154918993 -95768861 - AluJb SINE Alu -26 286 135 1016 204 15 58 chr2 154918993 154919267 -95768587 + L2 LINE L2 1819 2080 -1234 1633 201 61 6 chr2 154919267 154919695 -95768159 - MLT1D LTR MaLR 0 505 1 1815 294 74 55 chr2 154919696 154920750 -95767104 + L2 LINE L2 2077 3152 -161 244 203 31 16 chr2 154920788 154920852 -95767002 + MER69 DNA AcHobo 2453 2517 -9 511 250 34 14 chr2 154920856 154921004 -95766850 + L2 LINE L2 3163 3313 0 386 316 81 42 chr2 154921814 154922099 -95765755 - L1ME4a LINE L1 -1 6120 5825 2371 72 7 13 chr2 154923312 154923618 -95764236 - AluSx SINE Alu -8 304 1 6140 183 188 33 chr2 154924041 154924632 -95763222 - MER52A LTR ERV1 0 1755 1257 2253 60 7 17 chr2 154924632 154924931 -95762923 - AluY SINE Alu -15 296 1 6140 183 188 33 chr2 154924931 154925859 -95761995 - MER52A LTR ERV1 -498 1257 1 1481 139 71 7 chr2 154925860 154926141 -95761713 - MER52A-int LTR ERV1 -1 5216 4918 1909 143 7 0 chr2 154926144 154926452 -95761402 - MER52A-int LTR ERV1 -1224 3993 3684 * 2755 135 30 38 chr2 154926449 154927070 -95760784 - MER52A-int LTR ERV1 -2279 5537 2226 2168 136 0 0 chr2 154927091 154927400 -95760454 - AluSx SINE Alu -3 309 1 1934 121 9 9 chr2 154927401 154927716 -95760138 - MER52A-int LTR ERV1 -3742 2204 1890 454 136 49 0 chr2 154927725 154927806 -95760048 - MER52A-int LTR ERV1 -4805 1141 1057 23 0 0 0 chr2 154927808 154927831 -95760023 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 154927838 154927862 -95759992 + AT_rich Low_complexity Low_complexity 1 24 0 12490 174 35 18 chr2 154927862 154929220 -95758634 - L1PB1 LINE L1 -2 6865 5533 2014 149 0 0 chr2 154929220 154929509 -95758345 - AluSx SINE Alu -23 289 1 12490 174 35 18 chr2 154929509 154933039 -95754815 - L1PB1 LINE L1 -1334 5533 1703 2082 144 3 0 chr2 154933039 154933345 -95754509 - AluSc SINE Alu 0 309 3 12490 174 35 18 chr2 154933345 154934432 -95753422 - L1PB1 LINE L1 -5164 1703 637 1079 152 10 0 chr2 154934435 154934633 -95753221 - L1PB1 LINE L1 -6663 200 1 355 118 26 53 chr2 154934648 154934724 -95753130 - MER61-int LTR ERV1 -4883 1063 990 569 168 0 32 chr2 154934781 154934906 -95752948 - MER61-int LTR ERV1 -463 4754 4634 728 207 13 32 chr2 154934907 154935208 -95752646 - MER52A LTR ERV1 -1375 380 1 21 36 0 0 chr2 154935247 154935275 -95752579 + AT_rich Low_complexity Low_complexity 1 28 0 351 305 183 0 chr2 154936128 154936259 -95751595 - L2 LINE L2 0 3313 3159 557 204 21 120 chr2 154936325 154936516 -95751338 - MER5B DNA MER1_type 0 178 7 2915 273 104 64 chr2 154936522 154938183 -95749671 - L2 LINE L2 -1197 2117 391 920 276 51 28 chr2 154938237 154938491 -95749363 + MIR SINE MIR 2 261 -1 321 156 13 13 chr2 154938827 154938904 -95748950 + L1MD3 LINE L1 6982 7058 -937 401 294 95 29 chr2 154939893 154940199 -95747655 - L1MEd LINE L1 -5012 1107 782 269 300 62 53 chr2 154940939 154941166 -95746688 + L2 LINE L2 2737 2965 -349 381 340 117 75 chr2 154941245 154941657 -95746197 - L2 LINE L2 -2 3270 2842 325 271 93 16 chr2 154941747 154941876 -95745978 - L2 LINE L2 -602 2712 2574 269 291 87 51 chr2 154942196 154942471 -95745383 - L2 LINE L2 -1761 1553 1269 2161 238 46 11 chr2 154943134 154943790 -95744064 + L1MC4a LINE L1 6717 7395 -413 186 326 130 14 chr2 154944007 154944145 -95743709 + L2 LINE L2 3117 3270 -43 250 304 52 52 chr2 154944260 154944375 -95743479 + MIR SINE MIR 38 152 -56 24 0 0 0 chr2 154944400 154944424 -95743430 + AT_rich Low_complexity Low_complexity 1 24 0 5237 201 53 34 chr2 154947137 154947833 -95740021 - L1MC1 LINE L1 0 6613 5931 1991 117 4 4 chr2 154947833 154948114 -95739740 + AluSg SINE Alu 17 297 -13 5237 201 53 34 chr2 154948114 154950100 -95737754 - L1MC1 LINE L1 -682 5931 3879 18859 177 31 10 chr2 154950103 154951197 -95736657 + L1M1 LINE L1 19 1089 -6476 1355 182 165 14 chr2 154951197 154951488 -95736366 + MER1B DNA MER1_type 3 337 0 18859 177 31 10 chr2 154951488 154956904 -95730950 + L1M1 LINE L1 1089 6662 -903 2260 143 85 10 chr2 154956904 154957302 -95730552 - MSTA LTR MaLR 0 428 1 6390 191 59 9 chr2 154957307 154958651 -95729203 - MSTA-int LTR MaLR -14 1637 227 811 139 28 0 chr2 154958635 154958779 -95729075 + L1MA2 LINE L1 6113 6260 -44 * 3833 157 68 62 chr2 154958809 154959020 -95728834 - L1MC1 LINE L1 -4847 1579 1371 2058 126 10 0 chr2 154959020 154959314 -95728540 - AluSq SINE Alu -16 297 1 3833 157 68 62 chr2 154959314 154959668 -95728186 - L1MC1 LINE L1 -5055 1371 1021 839 112 0 15 chr2 154959668 154959802 -95728052 - FLAM_C SINE Alu 0 133 2 3833 157 68 62 chr2 154959802 154960276 -95727578 - L1MC1 LINE L1 -5405 1021 533 2938 63 2 7 chr2 154960300 154960714 -95727140 - LTR7 LTR ERV1 -38 412 1 2296 89 45 21 chr2 154960714 154961095 -95726759 - HERVH LTR ERV1 0 7713 7324 1353 115 18 9 chr2 154961095 154961313 -95726541 - HERVH LTR ERV1 -1894 5819 5600 2835 165 0 2 chr2 154961314 154961800 -95726054 - HERVH LTR ERV1 -2564 5149 4665 1925 225 56 33 chr2 154961800 154962315 -95725539 - L1MC1 LINE L1 -5878 548 22 212 266 248 9 chr2 154962408 154962521 -95725333 - L2 LINE L2 0 3313 3174 245 384 35 17 chr2 154962754 154962926 -95724928 - L2 LINE L2 -211 3061 2887 258 148 262 0 chr2 154963276 154963337 -95724517 + MER39B LTR ERV1 1 77 -576 2355 138 8 0 chr2 154963338 154963707 -95724147 + THE1C LTR MaLR 4 375 0 9608 133 15 45 chr2 154963708 154964156 -95723698 + THE1C-int LTR MaLR 2 462 -1118 7875 14 0 0 chr2 154964156 154965626 -95722228 - L1PA2 LINE L1 -1 6154 4685 9608 133 15 45 chr2 154965626 154966806 -95721048 + THE1C-int LTR MaLR 462 1580 0 2453 121 5 5 chr2 154966806 154967178 -95720676 + THE1C LTR MaLR 1 372 -3 3340 148 22 16 chr2 154967181 154967760 -95720094 + MER39B LTR ERV1 71 653 0 2121 115 0 7 chr2 154967797 154968128 -95719726 + AluSq SINE Alu 1 329 0 2217 164 55 7 chr2 154968147 154968562 -95719292 - MER31A LTR ERV1 -50 435 1 198 250 16 16 chr2 154968960 154969024 -95718830 - L2 LINE L2 -1197 2117 2054 24 0 0 0 chr2 154969176 154969200 -95718654 + AT_rich Low_complexity Low_complexity 1 24 0 684 273 137 52 chr2 154970831 154971292 -95716562 - MLT1J LTR MaLR -8 503 4 244 319 0 14 chr2 154971356 154971425 -95716429 + MER45C DNA AcHobo 221 288 -665 242 196 179 0 chr2 154971549 154971605 -95716249 + MER45C DNA AcHobo 483 548 -405 1066 225 47 31 chr2 154971868 154972188 -95715666 + MER45B DNA AcHobo 716 1040 0 321 270 113 9 chr2 154973299 154973414 -95714440 - L2 LINE L2 0 3313 3187 465 331 66 29 chr2 154973526 154973768 -95714086 + MIR SINE MIR 2 252 -10 514 232 155 32 chr2 154973892 154974047 -95713807 - MER5A DNA MER1_type 0 189 16 2680 178 44 0 chr2 154974513 154975014 -95712840 + L1MB7 LINE L1 5620 6142 -42 574 263 100 11 chr2 154975144 154975347 -95712507 + MLT1H LTR MaLR 4 266 -283 335 265 53 8 chr2 154975424 154975532 -95712322 + MLT1H LTR MaLR 435 534 -15 1883 148 17 3 chr2 154976001 154976292 -95711562 - AluSx SINE Alu -15 297 3 604 242 143 6 chr2 154976562 154976744 -95711110 - L2 LINE L2 0 3313 3107 490 333 108 24 chr2 154976788 154977085 -95710769 - LTR16A LTR ERVL -128 322 1 3468 256 99 47 chr2 154977085 154978465 -95709389 - L2 LINE L2 -560 2754 1304 2178 138 3 15 chr2 154978465 154978805 -95709049 - MER1B DNA MER1_type 0 337 2 1029 278 233 25 chr2 154978828 154978991 -95708863 - L2 LINE L2 -2380 934 806 1758 134 14 22 chr2 154978991 154979267 -95708587 + AluJb SINE Alu 13 286 -26 1029 278 233 25 chr2 154979267 154979782 -95708072 - L2 LINE L2 -2508 806 115 2077 63 0 63 chr2 154979825 154980112 -95707742 + AluY SINE Alu 30 298 -13 276 77 0 0 chr2 154980412 154980451 -95707403 + (TG)n Simple_repeat Simple_repeat 2 40 0 395 237 88 9 chr2 154980686 154980800 -95707054 + L2 LINE L2 3190 3312 -1 2801 10 0 0 chr2 154980952 154981255 -95706599 - AluY SINE Alu -8 303 1 23 33 0 0 chr2 154981267 154981297 -95706557 + AT_rich Low_complexity Low_complexity 1 30 0 724 281 105 5 chr2 154981311 154981521 -95706333 - MIR SINE MIR -30 232 2 228 223 48 97 chr2 154982383 154982486 -95705368 - MER102b DNA MER1_type -10 331 234 270 291 73 77 chr2 154982556 154982803 -95705051 + L2 LINE L2 2145 2390 -924 1986 148 48 15 chr2 154982816 154983153 -95704701 + MER7A DNA MER2_type 1 346 0 377 317 79 71 chr2 154983172 154983692 -95704162 + L2 LINE L2 2454 2977 -337 973 231 91 127 chr2 154984819 154986024 -95701830 - L1MC5 LINE L1 -181 7780 6620 319 333 40 4 chr2 154986189 154986417 -95701437 - L1M4 LINE L1 -1088 5058 4823 304 373 73 28 chr2 154986686 154987036 -95700818 - L1M4 LINE L1 -1617 4529 4196 2052 154 6 19 chr2 154987036 154987400 -95700454 - MER46B DNA MER2_type 0 236 3 266 0 29 0 chr2 154987400 154987434 -95700420 + (TG)n Simple_repeat Simple_repeat 2 36 0 304 373 73 28 chr2 154987434 154987576 -95700278 - L1M4 LINE L1 -1949 4197 4014 302 67 22 0 chr2 154987774 154987819 -95700035 + (TC)n Simple_repeat Simple_repeat 1 46 0 416 99 14 0 chr2 154987819 154987890 -95699964 + (TG)n Simple_repeat Simple_repeat 1 72 0 353 186 0 23 chr2 154987895 154987981 -95699873 - L1MC4 LINE L1 -129 7913 7830 229 215 127 0 chr2 154988592 154988671 -95699183 - HAL1b LINE L1 -968 380 292 25 0 0 0 chr2 154989945 154989970 -95697884 + AT_rich Low_complexity Low_complexity 1 25 0 955 276 173 12 chr2 154990567 154990972 -95696882 + MLT1E LTR MaLR 124 593 0 194 152 0 22 chr2 154991229 154991275 -95696579 + (TG)n Simple_repeat Simple_repeat 2 46 0 1087 209 5 0 chr2 154991295 154991496 -95696358 - MER6B DNA MER2_type -7 203 2 2493 69 0 0 chr2 154992107 154992412 -95695442 - AluY SINE Alu -6 305 1 288 323 90 30 chr2 154992420 154992553 -95695301 - MIR SINE MIR -120 142 2 473 300 8 0 chr2 154992632 154992762 -95695092 - MIR SINE MIR -82 180 50 800 215 25 0 chr2 154993977 154994140 -95693714 - AluJb SINE Alu -9 303 137 1261 291 125 41 chr2 154994386 154995279 -95692575 - L1ME3A LINE L1 -13 6157 5188 2700 129 5 14 chr2 154995302 154995744 -95692110 - L1MA1 LINE L1 0 6302 5865 16148 195 35 17 chr2 154995744 155002603 -95685251 - L1M1 LINE L1 -705 7019 19 33 80 0 0 chr2 155003549 155003624 -95684230 + AT_rich Low_complexity Low_complexity 1 75 0 26 0 0 0 chr2 155003674 155003700 -95684154 + AT_rich Low_complexity Low_complexity 1 26 0 31 26 0 0 chr2 155005250 155005288 -95682566 + AT_rich Low_complexity Low_complexity 1 38 0 2030 155 12 6 chr2 155005395 155005730 -95682124 + MER1B DNA MER1_type 1 337 0 21 0 0 0 chr2 155007251 155007272 -95680582 + AT_rich Low_complexity Low_complexity 1 21 0 7385 245 54 55 chr2 155007774 155011226 -95676628 + L1PB4 LINE L1 174 3622 -3226 1929 157 3 7 chr2 155011226 155011526 -95676328 + AluSx SINE Alu 1 299 -13 7385 245 54 55 chr2 155011526 155011627 -95676227 + L1PB4 LINE L1 3622 3722 -3126 2168 126 48 25 chr2 155011627 155011983 -95675871 - THE1B LTR MaLR 0 364 1 4547 77 2 0 chr2 155011983 155012552 -95675302 - THE1B-int LTR MaLR 0 1580 1011 4437 86 17 33 chr2 155012652 155012938 -95674916 - THE1B-int LTR MaLR -931 649 360 1549 103 119 12 chr2 155012938 155013190 -95674664 + AluSp SINE Alu 5 306 0 187 43 0 0 chr2 155013190 155013213 -95674641 + (GAAAA)n Simple_repeat Simple_repeat 2 105 0 4437 86 17 33 chr2 155013213 155013585 -95674269 - THE1B-int LTR MaLR -1220 360 1 2064 129 33 41 chr2 155013587 155013952 -95673902 - THE1B LTR MaLR -2 362 1 6942 205 44 11 chr2 155013952 155016742 -95671112 + L1PB4 LINE L1 3718 6685 -173 2618 223 86 30 chr2 155016743 155017585 -95670269 + L1PBa LINE L1 128 1016 -5847 22 0 0 0 chr2 155018112 155018134 -95669720 + AT_rich Low_complexity Low_complexity 1 22 0 354 356 109 32 chr2 155018296 155018700 -95669154 + L2 LINE L2 1854 2288 -1026 435 281 14 7 chr2 155018907 155019046 -95668808 + HAL1b LINE L1 550 689 -659 762 299 107 51 chr2 155019968 155020493 -95667361 - MLT1G1 LTR MaLR -40 555 2 324 267 113 47 chr2 155020592 155020742 -95667112 + L1M4 LINE L1 4500 4659 -1487 206 277 0 0 chr2 155020813 155020860 -95666994 + (TA)n Simple_repeat Simple_repeat 1 47 0 805 231 12 0 chr2 155021205 155021378 -95666476 - MER45A DNA AcHobo -3 175 1 2050 178 118 6 chr2 155021408 155022108 -95665746 + L1M4 LINE L1 4858 5612 -572 1094 300 92 18 chr2 155022165 155022732 -95665122 + L2 LINE L2 2703 3312 -1 910 198 6 81 chr2 155023239 155023562 -95664292 - L1MA4 LINE L1 -90 6210 5912 219 378 27 0 chr2 155023609 155023683 -95664171 - MIR SINE MIR -166 96 21 640 209 77 41 chr2 155024732 155024928 -95662926 + MER105 DNA DNA 1 203 -1 1047 301 73 54 chr2 155026288 155027000 -95660854 - L2 LINE L2 -1 3312 2584 599 312 163 0 chr2 155027163 155027384 -95660470 + MLT1J LTR MaLR 79 335 -176 274 367 92 0 chr2 155028889 155028987 -95658867 - L2 LINE L2 -16 3256 3150 324 397 37 0 chr2 155028991 155029127 -95658727 - MIR3 SINE MIR -40 168 28 264 276 0 0 chr2 155030238 155030343 -95657511 + (TA)n Simple_repeat Simple_repeat 1 105 0 1335 126 70 0 chr2 155030466 155030680 -95657174 - MER30 DNA MER1_type -1 229 1 257 270 81 0 chr2 155031367 155031441 -95656413 - L2 LINE L2 -16 3297 3218 239 186 38 27 chr2 155032684 155032950 -95654904 + (TA)n Simple_repeat Simple_repeat 1 269 0 1660 192 7 0 chr2 155032984 155033163 -95654691 - AluJb SINE Alu 0 312 129 219 36 0 0 chr2 155033163 155033191 -95654663 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1660 192 7 0 chr2 155033191 155033319 -95654535 - AluJb SINE Alu -183 129 3 356 275 58 68 chr2 155034341 155034485 -95653369 + L1MDa LINE L1 2444 2587 -3953 2086 110 20 3 chr2 155034485 155034785 -95653069 + AluSx SINE Alu 1 305 -7 356 275 58 68 chr2 155034785 155034847 -95653007 + L1MDa LINE L1 2587 2648 -3892 24 0 0 0 chr2 155034981 155035005 -95652849 + AT_rich Low_complexity Low_complexity 1 24 0 318 326 45 54 chr2 155035026 155035268 -95652586 + L1M4 LINE L1 4759 4998 -1148 232 258 90 11 chr2 155035352 155035441 -95652413 - MIR SINE MIR -145 117 22 1782 152 26 10 chr2 155035452 155035754 -95652100 - AluSx SINE Alu -5 307 1 225 0 0 0 chr2 155035772 155035797 -95652057 + (T)n Simple_repeat Simple_repeat 1 25 0 9513 130 8 24 chr2 155085797 155086765 -95601089 + L1P LINE L1 1867 2800 -3346 1550 101 18 5 chr2 155086765 155086984 -95600870 + AluSc SINE Alu 1 222 -87 9513 130 8 24 chr2 155086984 155087663 -95600191 + L1P LINE L1 2800 3488 -2658 812 231 12 0 chr2 155087973 155088146 -95599708 - MER45A DNA AcHobo -3 175 1 2012 178 118 6 chr2 155088176 155088876 -95598978 + L1MB1 LINE L1 4858 5612 -572 344 326 57 21 chr2 155088933 155089074 -95598780 + L2 LINE L2 2703 2848 -466 10746 81 7 2 chr2 155089175 155090665 -95597189 + L1P LINE L1 3630 5126 -1020 13418 43 3 0 chr2 155090765 155092465 -95595389 - L1P LINE L1 -2582 3564 1860 290 133 22 0 chr2 155092463 155092508 -95595346 + L1P LINE L1 857 902 -5244 * 805 182 18 12 chr2 155092710 155092880 -95594974 + L1MB1 LINE L1 5996 6166 -2 557 101 0 0 chr2 155093863 155093942 -95593912 - MADE1 DNA Mariner -1 79 1 11943 36 4 1 chr2 155094044 155095502 -95592352 - L1PA3 LINE L1 -1408 4738 3277 7581 32 0 0 chr2 155095509 155096938 -95590916 + L1PA3 LINE L1 4723 6152 -3 33 0 0 0 chr2 155096938 155096971 -95590883 + AT_rich Low_complexity Low_complexity 1 33 0 381 54 0 0 chr2 155096971 155097027 -95590827 + L1P LINE L1 4980 5035 -1111 243 0 0 0 chr2 155097042 155097069 -95590785 + (TA)n Simple_repeat Simple_repeat 1 27 0 21507 30 2 0 chr2 155097169 155100047 -95587807 + L1P1 LINE L1 2774 5656 -499 22 0 0 0 chr2 155100409 155100431 -95587423 + AT_rich Low_complexity Low_complexity 1 22 0 2038 117 21 0 chr2 155100550 155100833 -95587021 + AluSx SINE Alu 10 298 -14 231 217 0 0 chr2 155101166 155101226 -95586628 + (TA)n Simple_repeat Simple_repeat 2 61 0 732 308 98 11 chr2 155101338 155101624 -95586230 - LTR16A LTR ERVL 0 450 140 317 207 35 35 chr2 155101625 155101741 -95586113 + L1MC5 LINE L1 7649 7764 -197 284 205 0 18 chr2 155101756 155101820 -95586034 + L1MC4a LINE L1 6858 6911 -897 742 225 102 103 chr2 155101935 155102681 -95585173 + L1MC5 LINE L1 7001 7745 -216 247 231 77 0 chr2 155102773 155102838 -95585016 - MER2 DNA MER2_type -7 338 269 956 217 19 14 chr2 155102871 155103078 -95584776 - MER2 DNA MER2_type -136 209 2 322 272 104 32 chr2 155103103 155103228 -95584626 + L2 LINE L2 3179 3312 -1 187 380 25 0 chr2 155104348 155104427 -95583427 - L2 LINE L2 -8 3305 3225 282 193 0 0 chr2 155104520 155104577 -95583277 + (TG)n Simple_repeat Simple_repeat 1 57 0 204 364 91 27 chr2 155104640 155104750 -95583104 + L2 LINE L2 3148 3264 -8 518 290 21 38 chr2 155105596 155105782 -95582072 - MIR SINE MIR -21 241 59 253 278 78 94 chr2 155106942 155107133 -95580721 - Charlie8 DNA MER1_type -2228 189 2 355 127 0 18 chr2 155107937 155107992 -95579862 + MER66B LTR ERV1 293 346 -140 22 0 0 0 chr2 155107992 155108014 -95579840 + AT_rich Low_complexity Low_complexity 1 22 0 502 342 84 20 chr2 155108152 155108450 -95579404 - L2 LINE L2 0 3313 2997 5061 124 74 16 chr2 155109067 155109927 -95577927 - MER11B LTR ERVK -326 910 1 372 215 259 24 chr2 155109927 155110123 -95577731 + MLT1G LTR MaLR 299 590 0 1184 259 51 6 chr2 155110171 155110526 -95577328 + ERVL LTR ERVL 4973 5343 -421 366 313 94 56 chr2 155110717 155110950 -95576904 - L2 LINE L2 -429 2885 2644 228 175 38 38 chr2 155110955 155111035 -95576819 + (TATAA)n Simple_repeat Simple_repeat 5 84 0 424 297 74 63 chr2 155111036 155111305 -95576549 - MLT1I LTR MaLR -40 369 98 304 333 46 0 chr2 155111519 155111627 -95576227 + MIR3 SINE MIR 47 159 -49 268 317 73 21 chr2 155112101 155112388 -95575466 - L1ME4a LINE L1 -202 5919 5618 1007 350 19 16 chr2 155112432 155112864 -95574990 + LTR16A LTR ERVL 17 449 -1 4792 242 82 21 chr2 155113828 155116271 -95571583 + L1PA13 LINE L1 494 3483 -3314 4005 253 12 21 chr2 155116291 155117211 -95570643 + L1PA13 LINE L1 1 912 -5875 626 137 0 0 chr2 155117210 155117305 -95570549 + L1PA15 LINE L1 6029 6123 -42 * 440 165 0 0 chr2 155117438 155117523 -95570331 + L1PA15 LINE L1 6080 6164 -1 19044 133 14 19 chr2 155117560 155120644 -95567210 + L1PA5 LINE L1 11 3080 -3066 15351 46 1 2 chr2 155120837 155123512 -95564342 + L1PA5 LINE L1 3469 6145 -9 755 329 115 9 chr2 155125742 155126865 -95560989 - L1M4 LINE L1 -1798 4348 3107 679 290 140 45 chr2 155126891 155127639 -95560215 - L1M4 LINE L1 -3110 3036 2218 26 50 0 0 chr2 155128212 155128252 -95559602 + AT_rich Low_complexity Low_complexity 1 40 0 1596 183 10 14 chr2 155129196 155129486 -95558368 - AluJb SINE Alu -23 289 1 2614 316 134 15 chr2 155129942 155130898 -95556956 + L2 LINE L2 34 1186 -2128 387 0 0 0 chr2 155130898 155130941 -95556913 + (CAAAA)n Simple_repeat Simple_repeat 1 43 0 2614 316 134 15 chr2 155130941 155131283 -95556571 + L2 LINE L2 1186 1486 -1828 712 290 216 21 chr2 155131342 155131817 -95556037 + L2 LINE L2 2584 3127 -186 199 365 14 14 chr2 155131823 155131897 -95555957 - L2 LINE L2 -29 3243 3170 425 342 133 10 chr2 155132688 155132989 -95554865 - L3b LINE CR1 -131 1452 1115 210 143 0 0 chr2 155134298 155134333 -95553521 + (TA)n Simple_repeat Simple_repeat 1 35 0 238 75 0 0 chr2 155134333 155134373 -95553481 - LTR66 LTR ERVL -171 439 400 185 368 39 65 chr2 155134756 155134911 -95552943 + MIR SINE MIR 102 252 -10 2459 85 0 0 chr2 155134914 155135220 -95552634 + AluSg SINE Alu 1 306 -4 361 210 30 20 chr2 155136595 155136695 -95551159 + L1MC2 LINE L1 5720 5820 -524 959 105 0 0 chr2 155136703 155136827 -95551027 + AluSq/x SINE Alu 2 125 -187 1670 187 19 87 chr2 155136935 155137386 -95550468 + L1MC2 LINE L1 5910 6339 -5 232 290 167 19 chr2 155137389 155137551 -95550303 - MER90 LTR ERV1 -22 592 407 6753 48 7 5 chr2 155137636 155138714 -95549140 + L1PA5 LINE L1 5022 6098 -56 966 289 26 32 chr2 155139044 155139421 -95548433 - MLT1L LTR MaLR -10 605 231 358 293 5 2 chr2 155139535 155139719 -95548135 - MER58C DNA MER1_type 0 215 1 298 98 0 0 chr2 155139799 155139840 -95548014 - L2 LINE L2 -8 3305 3265 180 0 0 0 chr2 155141587 155141607 -95546247 + (A)n Simple_repeat Simple_repeat 1 20 0 24 0 0 0 chr2 155142613 155142637 -95545217 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 155142719 155142743 -95545111 + AT_rich Low_complexity Low_complexity 1 24 0 256 254 76 85 chr2 155143074 155143192 -95544662 - MIR SINE MIR -60 148 50 22 0 0 0 chr2 155144126 155144148 -95543706 + AT_rich Low_complexity Low_complexity 1 22 0 339 316 148 29 chr2 155144192 155144470 -95543384 + MARNA DNA Mariner 22 332 -254 2605 220 16 2 chr2 155144524 155145034 -95542820 + L1MA1 LINE L1 1188 1704 -5861 243 309 64 0 chr2 155145132 155145242 -95542612 + MARNA DNA Mariner 432 548 -38 13832 158 23 43 chr2 155145272 155145976 -95541878 + L1MA1 LINE L1 1756 2472 -5249 2002 161 0 0 chr2 155145976 155146274 -95541580 + AluSx SINE Alu 1 298 -14 13832 158 23 43 chr2 155146274 155151658 -95536196 + L1MA1 LINE L1 2472 7721 0 187 186 0 29 chr2 155151978 155152048 -95535806 + (TAA)n Simple_repeat Simple_repeat 3 70 0 239 222 19 0 chr2 155152100 155152154 -95535700 - MIR SINE MIR -73 189 135 23 33 0 0 chr2 155152176 155152206 -95535648 + AT_rich Low_complexity Low_complexity 1 30 0 1459 58 5 0 chr2 155152375 155152564 -95535290 - L1PA5 LINE L1 0 6154 5965 1542 27 0 0 chr2 155152564 155152748 -95535106 + L1PA5 LINE L1 5794 5977 -177 388 266 49 35 chr2 155153261 155153404 -95534450 - MLT1L LTR MaLR 0 615 471 1882 121 11 25 chr2 155153934 155154255 -95533599 - L1PA8 LINE L1 -453 5719 5448 3552 59 0 0 chr2 155154255 155154711 -95533143 + L1PA8 LINE L1 5716 6172 0 1782 152 26 10 chr2 155154737 155155039 -95532815 + AluSx SINE Alu 1 307 -5 232 258 90 11 chr2 155155050 155155139 -95532715 + MIR SINE MIR 22 117 -145 318 326 45 54 chr2 155155223 155155465 -95532389 - L1M4 LINE L1 -1148 4998 4759 24 0 0 0 chr2 155155486 155155510 -95532344 + AT_rich Low_complexity Low_complexity 1 24 0 6661 75 9 0 chr2 155155634 155156527 -95531327 + L1PA6 LINE L1 5254 6154 0 9792 225 24 17 chr2 155156535 155158102 -95529752 + L1PA15 LINE L1 2837 4430 -1716 399 41 0 0 chr2 155158102 155158151 -95529703 + (CA)n Simple_repeat Simple_repeat 2 50 0 9792 225 24 17 chr2 155158151 155158979 -95528875 + L1PA15 LINE L1 4430 5250 -896 180 0 0 0 chr2 155158982 155159002 -95528852 + (TA)n Simple_repeat Simple_repeat 2 21 0 3198 137 20 0 chr2 155159005 155159509 -95528345 + L1PA15 LINE L1 5644 6157 -8 555 207 52 30 chr2 155159653 155159788 -95528066 + MLT2F LTR ERVL 4 141 -522 1031 262 87 22 chr2 155159795 155160165 -95527689 + MLT2F LTR ERVL 270 663 0 225 94 0 0 chr2 155160955 155160987 -95526867 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 22 0 0 0 chr2 155162236 155162258 -95525596 + AT_rich Low_complexity Low_complexity 1 22 0 247 292 45 22 chr2 155163213 155163302 -95524552 + L2 LINE L2 2229 2319 -995 234 288 15 0 chr2 155163412 155163478 -95524376 + L3 LINE CR1 637 703 -874 517 269 159 24 chr2 155163969 155164177 -95523677 + MIR SINE MIR 27 262 0 217 195 49 0 chr2 155164177 155164218 -95523636 + L3 LINE CR1 1326 1368 -209 198 0 0 0 chr2 155164891 155164913 -95522941 + (TA)n Simple_repeat Simple_repeat 2 23 0 11292 164 17 6 chr2 155165470 155168345 -95519509 - L1PA13 LINE L1 -3 6160 3273 23 68 0 0 chr2 155168731 155168775 -95519079 + AT_rich Low_complexity Low_complexity 1 44 0 1029 184 16 11 chr2 155168926 155169111 -95518743 + MER58A DNA MER1_type 30 215 -9 1061 264 65 43 chr2 155169294 155169802 -95518052 - L1ME3A LINE L1 -37 6202 5684 414 0 0 0 chr2 155169813 155169859 -95517995 + (TG)n Simple_repeat Simple_repeat 2 47 0 231 36 0 0 chr2 155169887 155169915 -95517939 + (TG)n Simple_repeat Simple_repeat 2 29 0 430 268 92 52 chr2 155169915 155170165 -95517689 - L1ME3A LINE L1 -556 5683 5424 301 271 28 39 chr2 155170206 155170446 -95517408 - L1ME3A LINE L1 -857 5358 5031 342 280 93 45 chr2 155170447 155171020 -95516834 - L1ME3A LINE L1 -4734 1402 994 334 327 52 20 chr2 155171342 155171495 -95516359 + ERVL LTR ERVL 2016 2173 -3591 846 281 92 6 chr2 155171944 155172282 -95515572 + L1ME3A LINE L1 5795 6161 -9 2071 268 73 16 chr2 155172341 155173162 -95514692 + L1ME3A LINE L1 5254 6121 -49 1106 320 106 26 chr2 155173186 155173868 -95513986 + ERVL LTR ERVL 2266 3001 -2653 435 355 20 0 chr2 155173909 155174109 -95513745 + ERVL LTR ERVL 3055 3258 -2227 1215 199 65 122 chr2 155174298 155174658 -95513196 - MER4C LTR ERV1 0 465 139 2162 85 30 10 chr2 155174658 155174953 -95512901 + AluY SINE Alu 1 301 -10 1215 199 65 122 chr2 155174953 155175085 -95512769 - MER4C LTR ERV1 -326 139 1 999 233 38 0 chr2 155175241 155175547 -95512307 + L1ME3 LINE L1 5790 6123 -41 22 0 0 0 chr2 155175558 155175580 -95512274 + AT_rich Low_complexity Low_complexity 1 22 0 2706 212 18 18 chr2 155175711 155176267 -95511587 - MER68 LTR ERV1 -6 556 1 382 314 27 36 chr2 155176268 155176488 -95511366 + ERVL LTR ERVL 5187 5404 -360 22 0 0 0 chr2 155176524 155176546 -95511308 + AT_rich Low_complexity Low_complexity 1 22 0 474 233 0 0 chr2 155176711 155176793 -95511061 - MER44D DNA MER2_type -8 601 520 1969 177 37 33 chr2 155176793 155177340 -95510514 - MLT2A2 LTR ERVL -2 552 1 1115 186 64 17 chr2 155177342 155177578 -95510276 - MER44D DNA MER2_type -85 524 8 875 308 88 35 chr2 155178368 155178742 -95509112 - L2 LINE L2 -339 2975 2582 379 159 0 14 chr2 155178744 155178813 -95509041 + L1PA8A LINE L1 1810 1877 -4269 8966 120 9 17 chr2 155179018 155181181 -95506673 + L1PA8A LINE L1 3968 6131 0 1858 272 104 14 chr2 155181231 155181874 -95505980 - L2 LINE L2 -750 2564 1864 25 31 0 0 chr2 155181958 155181990 -95505864 + AT_rich Low_complexity Low_complexity 1 32 0 222 303 0 0 chr2 155182185 155182251 -95505603 + CT-rich Low_complexity Low_complexity 3 68 0 244 287 58 19 chr2 155182538 155182665 -95505189 + MIR3 SINE MIR 71 202 -6 214 287 181 0 chr2 155183905 155183999 -95503855 + MIR SINE MIR 53 163 -99 234 263 50 25 chr2 155184134 155184214 -95503640 - MLT1I LTR MaLR -27 568 487 505 189 54 54 chr2 155184394 155184542 -95503312 - MLT1H LTR MaLR -373 176 29 661 204 0 13 chr2 155184701 155184858 -95502996 - AluSc SINE Alu -17 292 138 318 169 0 0 chr2 155184859 155184948 -95502906 + C-rich Low_complexity Low_complexity 1 89 0 507 171 8 12 chr2 155184988 155185236 -95502618 + C-rich Low_complexity Low_complexity 1 247 0 208 341 171 0 chr2 155185622 155185751 -95502103 + MIR SINE MIR 2 152 -110 1962 115 72 32 chr2 155185757 155186104 -95501750 + THE1B LTR MaLR 4 364 0 376 267 33 0 chr2 155186313 155186403 -95501451 + LTR67 LTR ERVL 83 175 -382 341 202 46 18 chr2 155187455 155187564 -95500290 - Charlie1 DNA MER1_type -19 2742 2631 5286 159 31 40 chr2 155187565 155189145 -95498709 + L1MA7 LINE L1 4702 6290 -1 872 214 49 36 chr2 155189162 155189386 -95498468 - Charlie1 DNA MER1_type -2534 227 1 22 70 0 0 chr2 155189796 155189839 -95498015 + AT_rich Low_complexity Low_complexity 1 43 0 330 291 85 14 chr2 155190280 155190421 -95497433 - MIR SINE MIR -27 235 85 711 304 156 19 chr2 155190541 155190804 -95497050 - MLT1I LTR MaLR -67 342 44 1780 166 10 3 chr2 155192362 155192652 -95495202 - AluSx SINE Alu -20 292 1 27 0 0 0 chr2 155193200 155193227 -95494627 + AT_rich Low_complexity Low_complexity 1 27 0 1432 110 22 18 chr2 155195110 155195337 -95492517 - MER30 DNA MER1_type -2 228 1 21 36 0 0 chr2 155196469 155196497 -95491357 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr2 155196800 155196842 -95491012 + AT_rich Low_complexity Low_complexity 1 42 0 216 0 0 0 chr2 155197298 155197322 -95490532 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 214 175 0 0 chr2 155198033 155198073 -95489781 + L3 LINE CR1 1188 1227 -350 20286 43 53 3 chr2 155198314 155200899 -95486955 + L1P LINE L1 1 2714 -3432 1935 172 32 41 chr2 155201004 155201445 -95486409 + L1PB4 LINE L1 5706 6142 -14 2225 186 15 43 chr2 155201495 155202033 -95485821 + L1MA7 LINE L1 5769 6291 0 1311 266 126 32 chr2 155202873 155203809 -95484045 + L1ME LINE L1 185 1125 -4853 511 290 138 22 chr2 155203807 155204221 -95483633 + L1M4 LINE L1 3417 3878 -2268 * 215 0 0 62 chr2 155204226 155204258 -95483596 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 544 81 30 0 chr2 155204267 155204366 -95483488 + (TAAA)n Simple_repeat Simple_repeat 3 104 0 517 266 53 62 chr2 155204405 155204728 -95483126 + L1ME2 LINE L1 5828 6147 -17 212 233 0 0 chr2 155204841 155204884 -95482970 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 278 360 27 11 chr2 155205014 155205200 -95482654 + HAL1b LINE L1 445 633 -715 241 206 191 3 chr2 155206017 155206168 -95481686 - MIR SINE MIR -39 223 3 3300 242 59 52 chr2 155207092 155208317 -95479537 + L1MC4 LINE L1 6495 7741 -301 243 180 20 0 chr2 155209270 155209320 -95478534 + MADE1 DNA Mariner 30 80 0 256 234 191 0 chr2 155210430 155210524 -95477330 - L2 LINE L2 -6 3266 3155 618 264 91 60 chr2 155210700 155211052 -95476802 - MLT1L LTR MaLR -58 557 195 7432 209 102 39 chr2 155212379 155212763 -95475091 - L1PB3 LINE L1 -12 6142 5784 234 105 0 0 chr2 155212763 155212801 -95475053 + (CA)n Simple_repeat Simple_repeat 1 38 0 7432 209 102 39 chr2 155212801 155215450 -95472404 - L1PB3 LINE L1 -370 5784 2918 4881 72 3 0 chr2 155215450 155216087 -95471767 + L1PA8 LINE L1 5476 6114 -58 2517 71 3 0 chr2 155216277 155216585 -95471269 - AluY SINE Alu -2 309 1 23 68 0 0 chr2 155217297 155217341 -95470513 + AT_rich Low_complexity Low_complexity 1 44 0 3630 33 4 4 chr2 155217752 155218226 -95469628 - L1PA2 LINE L1 0 6155 5704 351 311 57 23 chr2 155218328 155218500 -95469354 - L1MDa LINE L1 -3892 2648 2575 2117 110 20 3 chr2 155218500 155218800 -95469054 - AluSx SINE Alu -7 305 1 351 311 57 23 chr2 155218800 155218910 -95468944 - L1MDa LINE L1 -3965 2575 2470 1690 192 7 0 chr2 155219966 155220094 -95467760 + AluJb SINE Alu 3 129 -183 219 36 0 0 chr2 155220094 155220122 -95467732 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1690 192 7 0 chr2 155220122 155220301 -95467553 + AluJb SINE Alu 129 312 0 239 186 38 27 chr2 155220335 155220601 -95467253 + (TA)n Simple_repeat Simple_repeat 1 269 0 255 270 81 0 chr2 155221845 155221919 -95465935 + L2 LINE L2 3218 3297 -16 1380 117 70 0 chr2 155222605 155222819 -95465035 + MER30 DNA MER1_type 1 229 -1 264 276 0 0 chr2 155222942 155223047 -95464807 + (TA)n Simple_repeat Simple_repeat 1 105 0 327 397 37 0 chr2 155224158 155224294 -95463560 + MIR3 SINE MIR 28 168 -40 273 367 92 0 chr2 155224298 155224396 -95463458 + L2 LINE L2 3150 3256 -16 565 293 162 5 chr2 155225982 155226204 -95461650 - MLT1J LTR MaLR -176 335 79 1036 297 78 59 chr2 155226367 155227079 -95460775 + L2 LINE L2 2584 3312 -1 642 209 77 41 chr2 155228439 155228635 -95459219 - MER105 DNA DNA -1 203 1 221 378 27 0 chr2 155229684 155229758 -95458096 + MIR SINE MIR 21 96 -166 1319 213 7 10 chr2 155229805 155230105 -95457749 + L1MA4 LINE L1 5912 6210 -90 876 280 126 25 chr2 155230612 155230976 -95456878 - L2 LINE L2 -1 3312 2912 318 210 22 52 chr2 155231104 155231256 -95456598 - L1P5 LINE L1 -519 5637 5506 1031 148 33 0 chr2 155231262 155231444 -95456410 - L1M2 LINE L1 -511 5780 5593 6051 133 18 11 chr2 155231523 155232538 -95455316 - L1MA2 LINE L1 0 6304 5283 751 228 0 12 chr2 155233704 155233871 -95453983 - AluJb SINE Alu -6 306 142 1548 257 109 67 chr2 155234118 155235045 -95452809 - L1ME3A LINE L1 -13 6157 5187 3873 120 23 20 chr2 155235058 155235412 -95452442 - L1MA1 LINE L1 0 6302 5944 2096 132 10 0 chr2 155235412 155235716 -95452138 - AluSx SINE Alu -5 307 1 3873 120 23 20 chr2 155235716 155236020 -95451834 - L1MA1 LINE L1 -358 5944 5642 382 59 0 0 chr2 155236041 155236092 -95451762 - MADE1 DNA Mariner 0 80 30 19220 179 29 20 chr2 155236092 155236861 -95450993 - L1ME LINE L1 -346 7235 6474 186 43 0 0 chr2 155236861 155236884 -95450970 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 19220 179 29 20 chr2 155236884 155243288 -95444566 - L1ME LINE L1 -1107 6474 13 1614 179 29 5 chr2 155243289 155243723 -95444131 - L1M2 LINE L1 -682 5609 5167 628 137 0 48 chr2 155244982 155245106 -95442748 - L1MA7 LINE L1 -1 7709 7592 11949 205 46 26 chr2 155245112 155246599 -95441255 - L1MA7 LINE L1 -235 7475 6021 1693 170 7 3 chr2 155246599 155246881 -95440973 - AluSx SINE Alu -29 283 1 11949 205 46 26 chr2 155246881 155249297 -95438557 - L1MA7 LINE L1 -1689 6021 3484 24 32 0 0 chr2 155249297 155249328 -95438526 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 155250868 155250890 -95436964 + AT_rich Low_complexity Low_complexity 1 22 0 351 289 86 27 chr2 155250911 155251319 -95436535 - L1MA7 LINE L1 -4191 3374 2943 2416 121 22 0 chr2 155251319 155251675 -95436179 + THE1B LTR MaLR 1 364 0 929 139 0 13 chr2 155251675 155251833 -95436021 + THE1B-int LTR MaLR 1 156 -1424 347 71 18 0 chr2 155251833 155251889 -95435965 + THE1B-int LTR MaLR 99 155 -1496 * 380 110 0 85 chr2 155251861 155251943 -95435911 + THE1B-int LTR MaLR 79 153 -1427 9271 115 34 21 chr2 155251943 155252244 -95435610 + THE1B-int LTR MaLR 97 393 -1187 2089 131 3 0 chr2 155252244 155252535 -95435319 + AluSp SINE Alu 1 292 -21 9271 115 34 21 chr2 155252535 155253698 -95434156 + THE1B-int LTR MaLR 393 1580 0 2053 174 22 0 chr2 155253698 155254054 -95433800 + THE1B LTR MaLR 1 364 0 1714 245 31 25 chr2 155254054 155254902 -95432952 - L1M3b LINE L1 -4292 2557 1703 4188 200 13 11 chr2 155254957 155256108 -95431746 - L1PB4 LINE L1 -14 6142 4991 3736 286 33 11 chr2 155256131 155256578 -95431276 - L1PA15-16 LINE L1 -3344 3505 3069 2138 122 0 7 chr2 155256578 155256881 -95430973 + AluY SINE Alu 4 304 -7 3736 286 33 11 chr2 155256881 155258135 -95429719 - L1PA15-16 LINE L1 -3780 3069 1774 789 303 19 15 chr2 155258175 155258499 -95429355 - L1PA15-16 LINE L1 -5189 1661 1337 299 292 0 0 chr2 155258486 155258575 -95429279 - L1PA15-16 LINE L1 -5286 1563 1475 * 345 143 0 0 chr2 155258572 155258621 -95429233 + L1PA15-16 LINE L1 1417 1465 -5384 4786 249 23 61 chr2 155258671 155260658 -95427196 - L1PA15-16 LINE L1 -5391 1458 1 1100 317 73 56 chr2 155260659 155261303 -95426551 - L1M3b LINE L1 -5038 1741 1087 251 208 31 10 chr2 155262277 155262373 -95425481 + L1ME4a LINE L1 6021 6118 -3 1453 187 10 58 chr2 155262608 155262902 -95424952 + AluJo SINE Alu 3 282 -30 656 147 0 0 chr2 155265373 155265482 -95422372 + MLT1A1 LTR MaLR 1 109 -256 255 216 0 0 chr2 155265548 155265599 -95422255 - MLT1I LTR MaLR -248 161 111 4153 122 40 92 chr2 155265608 155266419 -95421435 - LTR1 LTR ERV1 -2 783 16 651 141 0 0 chr2 155266737 155266836 -95421018 - L1PB4 LINE L1 -7 6149 6051 620 265 86 11 chr2 155266889 155267124 -95420730 + MIR SINE MIR 2 250 -12 22 0 0 0 chr2 155267635 155267657 -95420197 + AT_rich Low_complexity Low_complexity 1 22 0 462 36 0 0 chr2 155268207 155268263 -95419591 + (TA)n Simple_repeat Simple_repeat 2 57 0 414 310 84 116 chr2 155268797 155269132 -95418722 - L2 LINE L2 -23 3249 2926 482 255 130 58 chr2 155269826 155270033 -95417821 + MLT1F1 LTR MaLR 102 323 -244 512 182 0 55 chr2 155270033 155270143 -95417711 + MLT1B LTR MaLR 1 104 -286 316 232 37 37 chr2 155270143 155270225 -95417629 - MER7A DNA MER2_type 0 336 255 1484 139 23 34 chr2 155270294 155270560 -95417294 - MER7A DNA MER2_type -83 263 3 1205 189 30 77 chr2 155270561 155270858 -95416996 + MLT1B LTR MaLR 104 386 -4 191 30 0 61 chr2 155271387 155271420 -95416434 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2293 111 33 19 chr2 155271583 155271951 -95415903 + THE1C LTR MaLR 3 375 0 2261 152 14 25 chr2 155271953 155272425 -95415429 + MLT1B-int LTR MaLR 2 397 -1183 422 153 106 0 chr2 155272404 155272489 -95415365 + THE1-int LTR MaLR 415 508 -1072 * 4163 312 90 27 chr2 155272561 155274112 -95413742 + L1PA12 LINE L1 348 1995 -5586 238 323 5 68 chr2 155274132 155274324 -95413530 + L1PA12 LINE L1 1617 1796 -5785 13667 204 18 15 chr2 155274342 155278977 -95408877 + L1PA13 LINE L1 1539 5928 -1656 5210 120 18 65 chr2 155278978 155280112 -95407742 + L1PA13 LINE L1 6506 7601 0 1749 161 29 19 chr2 155280207 155280523 -95407331 - MER2 DNA MER2_type -3 342 24 375 286 43 5 chr2 155280562 155280747 -95407107 - L1ME4a LINE L1 -198 5923 5732 274 288 25 0 chr2 155280791 155280871 -95406983 - L1ME4a LINE L1 -485 5636 5555 2317 99 0 10 chr2 155280984 155281296 -95406558 - AluSc SINE Alu 0 309 1 23 78 0 0 chr2 155282232 155282283 -95405571 + AT_rich Low_complexity Low_complexity 1 51 0 2232 109 0 0 chr2 155282549 155282843 -95405011 - AluSg SINE Alu -16 294 1 23 0 0 0 chr2 155283216 155283239 -95404615 + AT_rich Low_complexity Low_complexity 1 23 0 466 273 182 0 chr2 155285988 155286131 -95401723 + MER5A DNA MER1_type 21 189 0 624 309 89 10 chr2 155287714 155288005 -95399849 + MLT1I LTR MaLR 91 404 -5 351 0 0 0 chr2 155288071 155288110 -95399744 + (TC)n Simple_repeat Simple_repeat 1 39 0 4096 157 32 13 chr2 155288131 155288876 -95398978 - Tigger1 DNA MER2_type 0 2418 1660 5824 144 16 6 chr2 155288877 155289841 -95398013 - Tigger1 DNA MER2_type -1422 996 24 189 222 0 0 chr2 155290985 155291021 -95396833 + MIR SINE MIR 57 92 -170 1434 206 35 72 chr2 155291270 155291436 -95396418 + MLT1B LTR MaLR 1 172 -218 2581 55 0 0 chr2 155291436 155291747 -95396107 + AluY SINE Alu 1 311 0 1434 206 35 72 chr2 155291747 155291983 -95395871 + MLT1B LTR MaLR 172 388 -2 1348 211 13 38 chr2 155292185 155292502 -95395352 - AluJb SINE Alu -3 309 1 309 342 36 0 chr2 155293290 155293486 -95394368 + HAL1b LINE L1 378 580 -768 1265 262 126 75 chr2 155293909 155294873 -95392981 + L1MC5 LINE L1 6566 7519 -442 232 180 49 0 chr2 155295250 155295311 -95392543 + (TA)n Simple_repeat Simple_repeat 1 64 0 27 29 0 0 chr2 155295518 155295552 -95392302 + AT_rich Low_complexity Low_complexity 1 34 0 320 272 60 63 chr2 155295742 155296010 -95391844 - L1MEd LINE L1 -5291 828 562 1647 341 161 5 chr2 155296298 155297258 -95390596 + L2 LINE L2 376 1485 -1829 430 257 112 61 chr2 155297433 155297647 -95390207 - MLT1L LTR MaLR -225 390 166 532 323 50 15 chr2 155297767 155297968 -95389886 + L2 LINE L2 1474 1681 -1633 1986 116 7 10 chr2 155297972 155298288 -95389566 - AluY SINE Alu 0 311 1 429 270 197 0 chr2 155298976 155299113 -95388741 + MIR SINE MIR 74 237 -25 189 107 0 0 chr2 155299128 155299156 -95388698 + (TTA)n Simple_repeat Simple_repeat 2 29 0 233 353 118 25 chr2 155299156 155299275 -95388579 - MIR3 SINE MIR -69 139 10 990 244 26 70 chr2 155299933 155300319 -95387535 - L1ME3 LINE L1 0 6162 5794 411 298 16 24 chr2 155301608 155301732 -95386122 - L3 LINE CR1 -23 1554 1432 554 265 107 86 chr2 155301815 155302184 -95385670 - MLT1H LTR MaLR -57 498 139 2394 46 0 0 chr2 155302184 155302535 -95385319 + AluY SINE Alu 1 351 0 554 265 107 86 chr2 155302535 155302678 -95385176 - MLT1H LTR MaLR -416 139 1 270 320 219 7 chr2 155302942 155303211 -95384643 - L3 LINE CR1 -154 1423 1098 212 315 43 11 chr2 155303279 155303371 -95384483 - L3 LINE CR1 -625 952 858 509 312 83 47 chr2 155304071 155304529 -95383325 - L2 LINE L2 -92 3221 2752 252 154 80 9 chr2 155304586 155304655 -95383199 - MLT2B3 LTR ERVL 0 554 444 861 367 27 13 chr2 155304709 155305159 -95382695 + ERVL LTR ERVL 3081 3536 -2228 2928 145 10 8 chr2 155305288 155305772 -95382082 + MER31A LTR ERV1 1 485 0 633 200 33 0 chr2 155305772 155305922 -95381932 + L1MB7 LINE L1 5673 5827 -357 11032 231 50 65 chr2 155305923 155312450 -95375404 + L1P4 LINE L1 1 6396 -472 626 130 0 78 chr2 155312611 155312674 -95375180 + MLT1E3 LTR MaLR 1 53 -571 1837 148 114 78 chr2 155312674 155313087 -95374767 + MSTA LTR MaLR 1 428 0 626 130 0 78 chr2 155313087 155313138 -95374716 + MLT1E3 LTR MaLR 53 106 -518 742 274 11 0 chr2 155313145 155313324 -95374530 + MER20 DNA MER1_type 38 218 -1 470 310 75 56 chr2 155313592 155313633 -95374221 + LTR16C LTR ERVL 71 110 -381 405 0 0 0 chr2 155313633 155313678 -95374176 + (TG)n Simple_repeat Simple_repeat 2 46 0 470 310 75 56 chr2 155313678 155313904 -95373950 + LTR16C LTR ERVL 110 343 -148 290 176 20 0 chr2 155313905 155313956 -95373898 - MSTC LTR MaLR 0 428 377 1943 161 5 50 chr2 155314116 155314496 -95373358 - MSTC LTR MaLR -65 363 1 576 218 75 14 chr2 155314496 155314637 -95373217 + LTR16C LTR ERVL 342 491 0 499 295 166 44 chr2 155314645 155315015 -95372839 - L2 LINE L2 -568 2746 2423 2095 143 5 60 chr2 155315015 155315366 -95372488 - THE1B LTR MaLR 0 364 34 2258 93 0 10 chr2 155315366 155315668 -95372186 + AluY SINE Alu 1 299 -12 2095 143 5 60 chr2 155315668 155315701 -95372153 - THE1B LTR MaLR -330 34 1 11335 102 5 6 chr2 155315701 155317283 -95370571 - THE1B-int LTR MaLR 0 1580 1 2376 129 5 30 chr2 155317283 155317655 -95370199 - THE1B LTR MaLR 0 364 2 499 295 166 44 chr2 155317655 155317764 -95370090 - L2 LINE L2 -890 2424 2206 328 303 76 38 chr2 155318275 155318513 -95369341 - L1ME LINE L1 -357 5764 5518 318 277 113 14 chr2 155318544 155318685 -95369169 - L1ME LINE L1 -2340 5468 5314 611 241 224 28 chr2 155319302 155319659 -95368195 + LTR50 LTR ERVL 50 476 -319 273 304 64 8 chr2 155320589 155320714 -95367140 + L3b LINE CR1 1243 1374 -209 761 226 38 0 chr2 155320780 155320939 -95366915 - MER58B DNA MER1_type -1 340 176 2564 204 15 4 chr2 155320940 155321421 -95366433 + Tigger7 DNA MER2_type 1 486 -2001 908 229 66 20 chr2 155321425 155321738 -95366116 + Tigger7 DNA MER2_type 394 2486 -1 232 308 0 0 chr2 155321745 155321797 -95366057 - MER58B DNA MER1_type -289 52 1 250 250 0 0 chr2 155322285 155322345 -95365509 - Charlie8 DNA MER1_type -1008 1409 1350 597 257 53 15 chr2 155322441 155322647 -95365207 - Charlie8 DNA MER1_type -2144 273 60 1338 178 68 34 chr2 155324203 155324529 -95363325 - L1MA9 LINE L1 -10 6302 5966 7490 35 1 0 chr2 155324532 155325433 -95362421 - L1PA3 LINE L1 0 6155 5254 6660 171 37 30 chr2 155325451 155327581 -95360273 - L1MA9 LINE L1 -329 5983 3851 338 250 77 3 chr2 155328771 155328935 -95358919 - LTR33 LTR ERVL -301 220 1 269 330 104 33 chr2 155329434 155329646 -95358208 - MIR SINE MIR -5 257 31 282 56 0 0 chr2 155330748 155330784 -95357070 + (CA)n Simple_repeat Simple_repeat 2 37 0 622 300 69 53 chr2 155330944 155331131 -95356723 + L1MEc LINE L1 1024 1207 -5189 2426 174 17 2 chr2 155331131 155331551 -95356303 - MSTB LTR MaLR 0 426 1 8459 182 18 12 chr2 155331559 155333199 -95354655 - MSTB-int LTR MaLR -2 1649 1 2350 146 22 65 chr2 155333199 155333644 -95354210 - MSTB LTR MaLR 0 426 1 622 300 69 53 chr2 155333644 155334217 -95353637 + L1MEc LINE L1 1212 1806 -4590 342 281 169 8 chr2 155334372 155334614 -95353240 + L1MEc LINE L1 2010 2290 -4106 777 211 85 31 chr2 155334619 155334940 -95352914 - LTR37A LTR ERV1 -2 424 49 1116 279 89 37 chr2 155334966 155335425 -95352429 + L1MEc LINE L1 2250 2769 -3446 180 0 0 0 chr2 155335425 155335445 -95352409 + (CA)n Simple_repeat Simple_repeat 1 20 0 1116 279 89 37 chr2 155335445 155335774 -95352080 + L1MEc LINE L1 2769 3079 -3136 557 253 35 18 chr2 155335898 155336068 -95351786 - LTR16A1 LTR ERVL -139 318 146 1527 258 119 30 chr2 155336432 155337390 -95350464 + L1MEc LINE L1 3126 4168 -2047 2891 259 79 67 chr2 155337501 155337904 -95349950 + L1ME1 LINE L1 111 508 -5888 2313 64 0 55 chr2 155337904 155338232 -95349622 + AluY SINE Alu 1 310 -1 2891 259 79 67 chr2 155338232 155339453 -95348401 + L1ME1 LINE L1 508 1755 -4641 1363 200 28 14 chr2 155339464 155339749 -95348105 + AluJo SINE Alu 22 310 -2 1582 223 105 42 chr2 155339749 155340723 -95347131 + L1ME1 LINE L1 1752 2754 -3461 707 211 7 0 chr2 155340722 155340864 -95346990 + L1ME1 LINE L1 5612 5754 -481 * 1437 200 60 37 chr2 155340871 155341396 -95346458 - MLT2A2 LTR ERVL -11 543 1 487 180 8 206 chr2 155341624 155341881 -95345973 + L1ME1 LINE L1 5790 5998 -235 202 196 22 43 chr2 155341881 155341973 -95345881 + (TATAA)n Simple_repeat Simple_repeat 1 90 0 327 274 19 89 chr2 155341973 155342130 -95345724 + L1ME1 LINE L1 5967 6112 -123 386 222 11 0 chr2 155342185 155342275 -95345579 + L1MA10 LINE L1 6235 6325 -9 813 265 67 80 chr2 155342292 155342497 -95345357 + L1MB8 LINE L1 4187 4393 -1753 2199 96 0 3 chr2 155342497 155342788 -95345066 + AluSq SINE Alu 1 290 -23 813 265 67 80 chr2 155342788 155343549 -95344305 + L1MB8 LINE L1 4393 5141 -1005 4099 179 40 15 chr2 155343588 155344448 -95343406 + L1MB8 LINE L1 5291 6171 -7 227 232 18 0 chr2 155344448 155344504 -95343350 + (TAGA)n Simple_repeat Simple_repeat 3 59 0 349 241 36 15 chr2 155344519 155344656 -95343198 + L1ME3A LINE L1 5160 5299 -847 1071 284 117 7 chr2 155344833 155345276 -95342578 + L1ME3A LINE L1 5501 5992 -178 392 315 49 20 chr2 155345310 155345513 -95342341 - MER63A DNA MER1_type -1 209 1 298 172 0 16 chr2 155345520 155345584 -95342270 + L1ME3A LINE L1 6105 6167 -3 236 208 42 52 chr2 155345823 155345919 -95341935 - Charlie8 DNA MER1_type -1928 489 395 379 333 25 19 chr2 155345921 155346080 -95341774 + MIR SINE MIR 8 167 -95 647 305 154 24 chr2 155346109 155346624 -95341230 - L2 LINE L2 -36 3277 2692 1321 181 4 8 chr2 155346656 155346915 -95340939 + MER44D DNA MER2_type 1 528 -81 2031 101 4 4 chr2 155346948 155347226 -95340628 - AluSq SINE Alu -24 289 12 380 222 12 0 chr2 155347259 155347340 -95340514 + MER44D DNA MER2_type 524 605 0 237 248 99 10 chr2 155347393 155347494 -95340360 - Charlie8 DNA MER1_type -2231 186 77 240 272 87 39 chr2 155348903 155349006 -95338848 - L2 LINE L2 -18 3295 3188 351 355 70 5 chr2 155349354 155349540 -95338314 - MIR SINE MIR -4 258 61 2050 127 0 37 chr2 155349759 155350082 -95337772 - AluSq SINE Alu -2 311 1 23 0 0 0 chr2 155351481 155351504 -95336350 + AT_rich Low_complexity Low_complexity 1 23 0 201 356 173 10 chr2 155351944 155352048 -95335806 - L2 LINE L2 -8 3264 3144 1439 50 10 0 chr2 155352595 155352794 -95335060 - L1PA2 LINE L1 -1720 4426 4226 7931 9 0 0 chr2 155352798 155354529 -95333325 + L1PA2 LINE L1 4423 6155 0 213 276 26 13 chr2 155355615 155355691 -95332163 + L2 LINE L2 3102 3178 -135 3651 128 10 0 chr2 155355695 155356218 -95331636 - MER1A DNA MER1_type -1 528 1 207 286 18 0 chr2 155356230 155356286 -95331568 + L2 LINE L2 3186 3242 -71 299 284 12 0 chr2 155356352 155356433 -95331421 + L2 LINE L2 3230 3311 -2 255 353 23 15 chr2 155356521 155356654 -95331200 - L2 LINE L2 -483 2831 2698 2036 222 57 67 chr2 155357177 155357921 -95329933 - L1MC4 LINE L1 -6 8036 7301 462 297 161 40 chr2 155357934 155358406 -95329448 + MLT1H LTR MaLR 13 541 -8 313 259 143 0 chr2 155358406 155358518 -95329336 - L1MC4 LINE L1 -746 7296 7169 258 325 56 16 chr2 155359058 155359184 -95328670 - MIR SINE MIR -90 172 42 280 68 0 45 chr2 155359278 155359322 -95328532 - MIR SINE MIR -32 230 189 207 148 19 37 chr2 155360066 155360120 -95327734 + G-rich Low_complexity Low_complexity 2 54 0 711 206 31 45 chr2 155360149 155360436 -95327418 + pTR5 LTR ERV1 746 1028 -1410 320 275 78 134 chr2 155360552 155360963 -95326891 - L1M2 LINE L1 -5693 1156 769 258 293 20 34 chr2 155361080 155361227 -95326627 + (TCTCTG)n Simple_repeat Simple_repeat 2 146 0 402 132 0 0 chr2 155362019 155362095 -95325759 + (TC)n Simple_repeat Simple_repeat 1 76 0 207 267 17 0 chr2 155362767 155362827 -95325027 + L2 LINE L2 3251 3311 -2 23 33 0 0 chr2 155363516 155363546 -95324308 + AT_rich Low_complexity Low_complexity 1 30 0 371 20 0 20 chr2 155364401 155364450 -95323404 + (CA)n Simple_repeat Simple_repeat 1 48 0 255 313 23 46 chr2 155366030 155366161 -95321693 - MIR SINE MIR -8 254 127 221 290 75 32 chr2 155367187 155367280 -95320574 - MER5A DNA MER1_type -55 134 38 658 261 45 0 chr2 155367350 155367526 -95320328 - MIR SINE MIR -21 241 58 318 50 0 0 chr2 155367562 155367602 -95320252 + (TG)n Simple_repeat Simple_repeat 2 41 0 1471 165 70 33 chr2 155367604 155367877 -95319977 - AluJo SINE Alu -29 283 1 216 0 0 0 chr2 155369159 155369183 -95318671 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1135 172 33 28 chr2 155370836 155371051 -95316803 - AluJo SINE Alu -13 299 84 342 197 66 156 chr2 155371053 155371243 -95316611 + HAL1 LINE L1 814 971 -1536 374 85 17 0 chr2 155371243 155371302 -95316552 + (TA)n Simple_repeat Simple_repeat 1 60 0 342 197 66 156 chr2 155371302 155371400 -95316454 + HAL1 LINE L1 971 1076 -1431 546 250 77 31 chr2 155371590 155371786 -95316068 + HAL1 LINE L1 1551 1755 -752 232 275 12 0 chr2 155371977 155372057 -95315797 + HAL1 LINE L1 2052 2132 -375 356 263 11 89 chr2 155372119 155372309 -95315545 + HAL1b LINE L1 737 911 -437 283 348 87 9 chr2 155372746 155372861 -95314993 + MIR SINE MIR 30 153 -55 874 74 0 0 chr2 155372864 155372972 -95314882 + AluSq/x SINE Alu 24 131 -181 384 218 0 0 chr2 155372972 155373059 -95314795 + (TATG)n Simple_repeat Simple_repeat 2 88 0 261 0 0 0 chr2 155373061 155373090 -95314764 + (CA)n Simple_repeat Simple_repeat 2 30 0 996 159 7 0 chr2 155373094 155373288 -95314566 + AluSp SINE Alu 134 328 0 234 62 0 0 chr2 155374203 155374235 -95313619 + (GA)n Simple_repeat Simple_repeat 1 32 0 1585 49 5 5 chr2 155374416 155374620 -95313234 - L1PA4 LINE L1 0 6155 5952 1625 45 0 0 chr2 155374620 155374820 -95313034 + L1PA4 LINE L1 5771 5970 -185 298 244 11 33 chr2 155375185 155375275 -95312579 + MIR SINE MIR 70 157 -105 332 253 35 11 chr2 155375300 155375387 -95312467 - MIR SINE MIR -25 237 149 254 269 37 56 chr2 155375385 155375493 -95312361 + MIR SINE MIR 157 262 0 * 22 0 0 0 chr2 155377030 155377052 -95310802 + AT_rich Low_complexity Low_complexity 1 22 0 2220 119 27 11 chr2 155377638 155378007 -95309847 - THE1C LTR MaLR 0 375 1 408 296 158 13 chr2 155378014 155378166 -95309688 + MER5A DNA MER1_type 13 186 -3 367 58 0 19 chr2 155378771 155378823 -95309031 + THE1A LTR MaLR 1 51 -304 1231 339 33 13 chr2 155378923 155379468 -95308386 - L2 LINE L2 -980 2334 1779 303 340 107 0 chr2 155379896 155380055 -95307799 + L1ME4a LINE L1 5757 5932 -189 28 48 0 0 chr2 155380233 155380275 -95307579 + AT_rich Low_complexity Low_complexity 1 42 0 324 317 21 7 chr2 155380602 155380744 -95307110 + HsTC2 DNA Tc2 411 554 -1344 228 422 65 0 chr2 155381155 155381385 -95306469 - L3 LINE CR1 -1130 447 203 206 217 22 0 chr2 155381395 155381441 -95306413 + CT-rich Low_complexity Low_complexity 4 50 0 924 217 31 8 chr2 155382209 155382467 -95305387 + L1MB8 LINE L1 5908 6171 -7 1608 267 122 10 chr2 155382509 155383291 -95304563 + L1ME3A LINE L1 5129 5992 -178 392 315 49 20 chr2 155383325 155383528 -95304326 - MER63A DNA MER1_type -1 209 1 298 172 0 16 chr2 155383535 155383599 -95304255 + L1ME3A LINE L1 6105 6167 -3 236 208 42 52 chr2 155383838 155383934 -95303920 - Charlie8 DNA MER1_type -1928 489 395 379 333 25 19 chr2 155383936 155384095 -95303759 + MIR SINE MIR 8 167 -95 647 305 154 24 chr2 155384124 155384639 -95303215 - L2 LINE L2 -36 3277 2692 1321 181 4 8 chr2 155384671 155384930 -95302924 + MER44D DNA MER2_type 1 528 -81 2031 101 4 4 chr2 155384963 155385241 -95302613 - AluSq SINE Alu -24 289 12 380 222 12 0 chr2 155385274 155385355 -95302499 + MER44D DNA MER2_type 524 605 0 237 248 99 10 chr2 155385408 155385509 -95302345 - Charlie8 DNA MER1_type -2231 186 77 240 272 87 39 chr2 155386918 155387021 -95300833 - L2 LINE L2 -18 3295 3188 351 355 70 5 chr2 155387369 155387555 -95300299 - MIR SINE MIR -4 258 61 2050 127 0 37 chr2 155387774 155388097 -95299757 - AluSq SINE Alu -2 311 1 23 0 0 0 chr2 155389496 155389519 -95298335 + AT_rich Low_complexity Low_complexity 1 23 0 201 356 173 10 chr2 155389959 155390063 -95297791 - L2 LINE L2 -8 3264 3144 1642 24 10 0 chr2 155390610 155390815 -95297039 - L1PA4 LINE L1 -1720 4426 4220 * 8113 23 2 0 chr2 155390813 155392358 -95295496 + L1PA4 LINE L1 4423 5970 -185 298 244 11 33 chr2 155392723 155392813 -95295041 + MIR SINE MIR 70 157 -105 332 253 35 11 chr2 155392838 155392925 -95294929 - MIR SINE MIR -25 237 149 254 269 37 56 chr2 155392923 155393031 -95294823 + MIR SINE MIR 157 262 0 * 22 0 0 0 chr2 155394568 155394590 -95293264 + AT_rich Low_complexity Low_complexity 1 22 0 548 279 65 47 chr2 155399139 155399645 -95288209 - L1ME4a LINE L1 -2 6119 5605 206 217 22 0 chr2 155400299 155400345 -95287509 + GA-rich Low_complexity Low_complexity 4 50 0 261 413 65 0 chr2 155400355 155400585 -95287269 + L3 LINE CR1 203 447 -1130 955 266 23 9 chr2 155400996 155401411 -95286443 - HsTC2 DNA Tc2 -1344 554 64 334 277 18 9 chr2 155401459 155401571 -95286283 + L1ME LINE L1 5594 5706 -415 231 219 36 29 chr2 155402099 155402236 -95285618 + (TA)n Simple_repeat Simple_repeat 1 138 0 1307 124 25 0 chr2 155402323 155402524 -95285330 - L1PA15 LINE L1 0 6165 5960 2211 208 132 44 chr2 155402636 155403683 -95284171 - L1MC4 LINE L1 -5 8037 6810 31 26 0 0 chr2 155404395 155404433 -95283421 + AT_rich Low_complexity Low_complexity 1 38 0 381 298 76 6 chr2 155404766 155404924 -95282930 - Charlie8 DNA MER1_type -2248 169 1 279 312 55 9 chr2 155404975 155405084 -95282770 + MIR SINE MIR 38 151 -111 213 39 0 0 chr2 155405651 155405677 -95282177 + (TA)n Simple_repeat Simple_repeat 2 27 0 1664 104 0 0 chr2 155405677 155405898 -95281956 - AluSg/x SINE Alu -8 304 84 1955 214 48 6 chr2 155406860 155407375 -95280479 - L1 LINE L1 -1281 4865 4329 384 298 40 40 chr2 155408521 155408672 -95279182 - MIR SINE MIR -106 156 6 489 81 81 0 chr2 155409122 155409196 -95278658 + MADE1 DNA Mariner 1 80 0 478 303 32 41 chr2 155409210 155409431 -95278423 + MIR SINE MIR 3 221 -41 21 57 0 0 chr2 155409431 155409466 -95278388 + AT_rich Low_complexity Low_complexity 1 35 0 279 262 63 16 chr2 155409548 155409674 -95278180 - L1ME3A LINE L1 -52 6913 6782 1550 276 33 20 chr2 155409776 155410387 -95277467 - L1ME3A LINE L1 -210 6747 6102 502 317 89 22 chr2 155410576 155411024 -95276830 - L1ME3A LINE L1 -1158 5783 5306 2127 112 9 18 chr2 155411025 155411355 -95276499 - Tigger7 DNA MER2_type 0 2587 2261 2898 200 43 2 chr2 155411358 155411894 -95275960 - Tigger7 DNA MER2_type -171 562 5 7677 25 25 11 chr2 155411993 155413027 -95274827 - L1PA4 LINE L1 -3 6152 5115 221 186 35 12 chr2 155413057 155413143 -95274711 + (TA)n Simple_repeat Simple_repeat 1 88 0 17189 201 21 17 chr2 155413146 155419146 -95268708 - L1PA13 LINE L1 -5 6809 787 3166 192 0 0 chr2 155419140 155419662 -95268192 - L1PA13 LINE L1 -6265 522 1 * 725 288 50 31 chr2 155419688 155420011 -95267843 - L1ME3A LINE L1 -1782 5159 4823 1660 126 4 4 chr2 155420011 155420249 -95267605 + AluSx SINE Alu 64 301 -11 725 288 50 31 chr2 155420249 155420383 -95267471 - L1ME3A LINE L1 -2118 4823 4693 837 329 105 31 chr2 155420491 155421045 -95266809 - L1ME3A LINE L1 -5324 1099 505 790 274 9 0 chr2 155421144 155421363 -95266491 - L1ME3A LINE L1 -6076 347 127 266 303 36 91 chr2 155421392 155421557 -95266297 - MLT1J LTR MaLR -116 395 240 504 59 0 0 chr2 155421832 155421900 -95265954 + (TTCC)n Simple_repeat Simple_repeat 1 68 0 1744 188 13 0 chr2 155421900 155422204 -95265650 - AluJo SINE Alu -4 308 1 335 317 98 15 chr2 155422233 155422438 -95265416 + MIR SINE MIR 13 234 -28 266 360 22 22 chr2 155422735 155422874 -95264980 + MIR3 SINE MIR 66 204 -4 310 281 6 113 chr2 155423011 155423171 -95264683 - L1ME3 LINE L1 -29 6133 5991 328 326 150 51 chr2 155424052 155425115 -95262739 + L2 LINE L2 1169 2336 -978 26 88 0 0 chr2 155425163 155425231 -95262623 + AT_rich Low_complexity Low_complexity 1 68 0 234 331 113 8 chr2 155425498 155425622 -95262232 - MIR SINE MIR -3 259 123 207 132 66 0 chr2 155425716 155425807 -95262047 + (TA)n Simple_repeat Simple_repeat 1 97 0 5505 129 24 0 chr2 155425989 155427373 -95260481 + L1PA15 LINE L1 4748 6153 -12 26 0 0 0 chr2 155428571 155428597 -95259257 + AT_rich Low_complexity Low_complexity 1 26 0 2219 108 0 16 chr2 155428633 155428949 -95258905 - AluSx SINE Alu -1 311 1 4115 37 0 0 chr2 155429290 155429779 -95258075 - L1PA5 LINE L1 0 6154 5666 6868 154 12 6 chr2 155429799 155431811 -95256043 - L1PA11 LINE L1 -8 6166 4146 25 0 0 0 chr2 155431913 155431938 -95255916 + AT_rich Low_complexity Low_complexity 1 25 0 249 243 40 132 chr2 155432845 155432997 -95254857 - L1ME LINE L1 -488 5633 5496 21 0 0 0 chr2 155433054 155433075 -95254779 + AT_rich Low_complexity Low_complexity 1 21 0 236 265 51 10 chr2 155434980 155435078 -95252776 + MER5A DNA MER1_type 11 112 -77 12616 210 52 21 chr2 155435090 155436816 -95251038 - L1PA15 LINE L1 -2 6163 4492 342 0 0 0 chr2 155436816 155436854 -95251000 + (TG)n Simple_repeat Simple_repeat 2 39 0 12616 210 52 21 chr2 155436854 155438364 -95249490 - L1PA15 LINE L1 -1673 4492 3030 2218 125 0 0 chr2 155438364 155438677 -95249177 - AluSq SINE Alu 0 313 1 12616 210 52 21 chr2 155438677 155439450 -95248404 - L1PA15 LINE L1 -3135 3030 2003 192 40 0 0 chr2 155439450 155439475 -95248379 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 12616 210 52 21 chr2 155439475 155439862 -95247992 - L1PA15 LINE L1 -4162 2003 1630 268 225 28 28 chr2 155439864 155439935 -95247919 + L2 LINE L2 3242 3312 -1 505 179 67 20 chr2 155440153 155440303 -95247551 - LTR40c LTR ERVL -9 453 308 460 286 53 13 chr2 155440406 155440666 -95247188 - LTR40c LTR ERVL -158 304 3 3776 250 42 40 chr2 155440668 155441835 -95246019 - HERVL40 LTR ERVL 0 5530 4362 867 212 108 39 chr2 155441836 155442095 -95245759 - MER2 DNA MER2_type -1 344 68 882 250 21 0 chr2 155442098 155442286 -95245568 - HERVL40 LTR ERVL -1619 3911 3720 251 284 0 0 chr2 155442287 155442354 -95245500 - HERVL40 LTR ERVL -4164 1366 1300 199 298 143 101 chr2 155442383 155442476 -95245378 - L2 LINE L2 -518 2796 2708 2184 90 17 0 chr2 155442476 155442766 -95245088 - AluY SINE Alu -16 295 1 199 298 143 101 chr2 155442766 155442853 -95245001 - L2 LINE L2 -606 2708 2626 2280 189 39 13 chr2 155442853 155443394 -95244460 + L1MB8 LINE L1 5615 6169 -9 199 298 143 101 chr2 155443394 155443548 -95244306 - L2 LINE L2 -688 2626 2447 1046 306 159 34 chr2 155443549 155444306 -95243548 - L2 LINE L2 -1330 1984 1119 1840 149 57 39 chr2 155444306 155444689 -95243165 - MLT1B LTR MaLR 0 390 1 1046 306 159 34 chr2 155444689 155444736 -95243118 - L2 LINE L2 -2195 1119 1079 730 271 117 52 chr2 155444757 155445126 -95242728 - L2 LINE L2 -96 3217 2825 458 186 0 29 chr2 155445220 155445322 -95242532 - L1ME2 LINE L1 -3 6161 6063 595 355 62 4 chr2 155445498 155445740 -95242114 - MIR SINE MIR 0 262 7 2108 128 10 0 chr2 155446002 155446306 -95241548 - AluSx SINE Alu -5 307 1 202 146 24 0 chr2 155446694 155446735 -95241119 + A-rich Low_complexity Low_complexity 2 43 0 418 123 0 0 chr2 155446815 155446880 -95240974 - AluSp/q SINE Alu -22 291 227 1175 134 0 0 chr2 155446881 155447045 -95240809 - AluSx SINE Alu -148 164 1 202 297 27 14 chr2 155447962 155448036 -95239818 - MIR SINE MIR -130 132 58 22 0 0 0 chr2 155449215 155449237 -95238617 + AT_rich Low_complexity Low_complexity 1 22 0 2277 112 0 0 chr2 155449249 155449544 -95238310 - AluSq SINE Alu -18 295 1 345 245 182 42 chr2 155449567 155449759 -95238095 - MIR SINE MIR -43 219 1 323 291 91 67 chr2 155450487 155450652 -95237202 + MIR3 SINE MIR 37 205 -3 1637 216 44 6 chr2 155452179 155452522 -95235332 - MLT1A1 LTR MaLR 0 365 10 214 394 63 0 chr2 155452723 155452850 -95235004 + MIR3 SINE MIR 60 194 -14 204 343 43 36 chr2 155452909 155453049 -95234805 - L2 LINE L2 0 3313 3173 200 189 0 0 chr2 155453061 155453098 -95234756 + (TG)n Simple_repeat Simple_repeat 2 38 0 395 219 0 0 chr2 155453098 155453171 -95234683 + MER7A DNA MER2_type 2 74 -274 4568 125 21 9 chr2 155453173 155453988 -95233866 - L1P LINE L1 -750 5413 4594 5123 104 20 5 chr2 155453996 155454755 -95233099 + L1PA13 LINE L1 5386 6155 -8 1734 139 37 0 chr2 155454756 155455029 -95232825 + MER7A DNA MER2_type 66 346 0 677 220 8 8 chr2 155455144 155455276 -95232578 + FLAM_C SINE Alu 2 133 0 503 278 106 51 chr2 155455580 155456542 -95231312 + L1MD3 LINE L1 4860 5792 -567 827 134 14 7 chr2 155456549 155456691 -95231163 + L1PA16 LINE L1 6024 6166 0 588 333 49 38 chr2 155457016 155457487 -95230367 - L2 LINE L2 -557 2757 2282 344 278 99 19 chr2 155458010 155458172 -95229682 + MIR3 SINE MIR 34 208 0 2047 179 35 33 chr2 155458361 155458910 -95228944 - MLT2A2 LTR ERVL 0 554 1 352 297 9 18 chr2 155459154 155459265 -95228589 - MIR SINE MIR -77 185 76 57 39 0 0 chr2 155460321 155460399 -95227455 + AT_rich Low_complexity Low_complexity 1 78 0 458 281 22 0 chr2 155460404 155460543 -95227311 - MIR SINE MIR -42 220 79 511 245 35 0 chr2 155461391 155461534 -95226320 - MER66B LTR ERV1 0 486 339 782 309 13 4 chr2 155461544 155461777 -95226077 + LOR1-int LTR ERV1 6890 7124 -996 8213 194 50 32 chr2 155461778 155463536 -95224318 - MER66B-int LTR ERV1 -2261 4415 2627 317 229 0 0 chr2 155463528 155463598 -95224256 - MER66B-int LTR ERV1 -4271 2405 2336 * 2835 170 53 21 chr2 155463586 155464469 -95223385 - MER66B-int LTR ERV1 -4507 2169 1223 744 279 5 25 chr2 155464535 155464736 -95223118 - MER66B-int LTR ERV1 -3542 3134 2938 2959 170 111 50 chr2 155464803 155465575 -95222279 - MER66B-int LTR ERV1 -5562 1114 296 252 325 48 8 chr2 155465588 155465714 -95222140 - MER66B-int LTR ERV1 -6279 397 267 * 1000 220 52 81 chr2 155465698 155466043 -95221811 - MER66B-int LTR ERV1 -6277 399 65 1836 189 65 44 chr2 155466061 155466537 -95221317 - MER66B LTR ERV1 0 486 1 22 35 0 0 chr2 155466574 155466603 -95221251 + AT_rich Low_complexity Low_complexity 1 29 0 416 91 65 0 chr2 155466768 155466845 -95221009 + L1MA10 LINE L1 6252 6333 -1 232 282 26 0 chr2 155467237 155467315 -95220539 + L1 LINE L1 2386 2465 -3681 371 235 25 0 chr2 155467636 155467717 -95220137 + L2 LINE L2 3229 3311 -2 457 234 253 26 chr2 155468417 155468725 -95219129 - L1ME1 LINE L1 -5 6161 5784 547 272 89 64 chr2 155468734 155469047 -95218807 - MLT1A1 LTR MaLR -12 353 33 1751 211 53 45 chr2 155469052 155469480 -95218374 - L1ME1 LINE L1 -390 5776 5249 477 0 0 0 chr2 155469480 155469533 -95218321 + (TG)n Simple_repeat Simple_repeat 2 54 0 1751 211 53 45 chr2 155469533 155469770 -95218084 - L1ME1 LINE L1 -917 5249 5015 1824 171 0 3 chr2 155469916 155470215 -95217639 + AluSx SINE Alu 1 298 -14 25 65 0 0 chr2 155470296 155470342 -95217512 + AT_rich Low_complexity Low_complexity 1 46 0 21 116 0 0 chr2 155470414 155470526 -95217328 + AT_rich Low_complexity Low_complexity 1 112 0 247 319 53 16 chr2 155470569 155470757 -95217097 - L1ME LINE L1 -238 5883 5689 1740 209 28 21 chr2 155470814 155471250 -95216604 - L1MA4 LINE L1 -6 6294 5856 7897 241 32 26 chr2 155471322 155472123 -95215731 - L1M1 LINE L1 -4045 3520 2725 2312 60 0 10 chr2 155472123 155472421 -95215433 - AluY SINE Alu -16 295 1 7897 241 32 26 chr2 155472421 155474420 -95213434 - L1M1 LINE L1 -4840 2725 10 28 48 0 0 chr2 155475068 155475110 -95212744 + AT_rich Low_complexity Low_complexity 1 42 0 354 327 107 0 chr2 155475288 155475447 -95212407 - L1ME4a LINE L1 -189 5932 5757 2034 322 134 19 chr2 155475875 155477200 -95210654 + L2 LINE L2 1779 3276 -37 1335 234 71 38 chr2 155477554 155478002 -95209852 + MLT1C LTR MaLR 5 467 0 28 29 0 0 chr2 155479292 155479327 -95208527 + AT_rich Low_complexity Low_complexity 1 35 0 182 171 0 0 chr2 155479664 155479699 -95208155 + L2 LINE L2 3273 3307 -6 207 374 16 16 chr2 155479821 155480003 -95207851 + L2 LINE L2 2636 2817 -497 312 325 57 8 chr2 155480046 155480209 -95207645 + MIR3 SINE MIR 9 179 -29 * 647 289 57 0 chr2 155480200 155480394 -95207460 - L2 LINE L2 0 3313 3109 192 281 35 35 chr2 155481075 155481132 -95206722 + MER5A DNA MER1_type 133 189 0 247 381 30 12 chr2 155481133 155481301 -95206553 + L2 LINE L2 2804 2974 -340 1572 148 36 23 chr2 155481433 155481736 -95206118 + L1MA9 LINE L1 6001 6307 -5 358 315 94 40 chr2 155481755 155482031 -95205823 + L2 LINE L2 3023 3313 0 2441 106 22 5 chr2 155483027 155483396 -95204458 - THE1C LTR MaLR 0 375 1 390 303 158 13 chr2 155483403 155483555 -95204299 + MER5A DNA MER1_type 13 186 -3 2717 77 3 0 chr2 155484160 155484512 -95203342 + THE1A LTR MaLR 1 353 -2 892 144 0 63 chr2 155484536 155484710 -95203144 + FRAM SINE Alu 1 157 -19 202 365 12 12 chr2 155484747 155484832 -95203022 + MIR SINE MIR 158 242 -20 21 36 0 0 chr2 155484852 155484880 -95202974 + AT_rich Low_complexity Low_complexity 1 28 0 326 336 124 47 chr2 155485848 155486211 -95201643 - L2 LINE L2 -371 2943 2553 291 352 29 0 chr2 155486318 155486423 -95201431 - L2 LINE L2 -945 2369 2262 25 31 0 0 chr2 155486730 155486762 -95201092 + AT_rich Low_complexity Low_complexity 1 32 0 3580 51 0 11 chr2 155486972 155487426 -95200428 - L1PA5 LINE L1 -6 6148 5700 24 32 0 0 chr2 155487653 155487684 -95200170 + AT_rich Low_complexity Low_complexity 1 31 0 26 82 0 0 chr2 155488502 155488563 -95199291 + AT_rich Low_complexity Low_complexity 1 61 0 40 37 0 0 chr2 155490222 155490276 -95197578 + AT_rich Low_complexity Low_complexity 1 54 0 449 218 0 0 chr2 155490329 155490438 -95197416 - L1ME1 LINE L1 0 6334 6067 444 242 81 16 chr2 155490501 155490687 -95197167 - L1MEc LINE L1 -5176 1220 1023 244 285 166 26 chr2 155490749 155490900 -95196954 + MIR SINE MIR 91 262 0 195 364 80 11 chr2 155491231 155491319 -95196535 + L2 LINE L2 3141 3234 -38 24 0 0 0 chr2 155491342 155491366 -95196488 + AT_rich Low_complexity Low_complexity 1 24 0 555 332 56 61 chr2 155492503 155493130 -95194724 - L2 LINE L2 -433 2881 2258 21 36 0 0 chr2 155493741 155493769 -95194085 + AT_rich Low_complexity Low_complexity 1 28 0 2455 177 33 26 chr2 155493772 155493827 -95194027 - L1MA7 LINE L1 -12 6279 6226 255 61 0 0 chr2 155493827 155493860 -95193994 + (CA)n Simple_repeat Simple_repeat 2 34 0 2455 177 33 26 chr2 155493860 155494345 -95193509 - L1MA7 LINE L1 -65 6226 5735 413 333 85 15 chr2 155495798 155495999 -95191855 - MIR SINE MIR -4 258 44 272 342 87 12 chr2 155497449 155497610 -95190244 + MIR SINE MIR 6 178 -84 2397 75 3 7 chr2 155499167 155499473 -95188381 + AluY SINE Alu 1 305 -6 7169 55 0 4 chr2 155499669 155500684 -95187170 - L1PA5 LINE L1 0 6154 5142 21 57 0 0 chr2 155501058 155501093 -95186761 + AT_rich Low_complexity Low_complexity 1 35 0 7714 234 37 75 chr2 155501276 155503401 -95184453 - L1MA6 LINE L1 0 7719 5515 6864 67 12 2 chr2 155503401 155504655 -95183199 - L1PA7 LINE L1 -3 6151 4891 7714 234 37 75 chr2 155504655 155508549 -95179305 - L1MA6 LINE L1 -2204 5515 2097 658 346 92 11 chr2 155508871 155509319 -95178535 - L1MA6 LINE L1 -5797 1699 1216 2322 136 53 12 chr2 155509368 155509779 -95178075 + MSTA LTR MaLR 1 428 0 1942 128 3 7 chr2 155509962 155510258 -95177596 - AluSc SINE Alu -14 295 1 484 314 22 16 chr2 155511526 155511711 -95176143 - MER5A DNA MER1_type -3 186 1 30 0 0 0 chr2 155512367 155512397 -95175457 + AT_rich Low_complexity Low_complexity 1 30 0 1600 236 98 64 chr2 155512615 155513179 -95174675 + MLT1E1 LTR MaLR 1 583 -71 832 175 0 0 chr2 155513889 155514032 -95173822 - L1P LINE L1 -2015 4131 3989 3814 122 11 28 chr2 155514176 155514822 -95173032 - L1PA15 LINE L1 -2 6814 6180 12351 233 38 14 chr2 155514824 155515256 -95172598 - L1PA15 LINE L1 -1167 5630 5210 1636 134 28 0 chr2 155515256 155515509 -95172345 - AluSx SINE Alu -17 295 36 12351 233 38 14 chr2 155515509 155519084 -95168770 - L1PA15 LINE L1 -1587 5210 1505 2531 275 107 32 chr2 155519256 155520319 -95167535 - L1PA15 LINE L1 -5644 1143 1 2363 61 3 3 chr2 155520390 155520686 -95167168 - AluY SINE Alu -15 296 1 24 53 0 0 chr2 155521050 155521088 -95166766 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 155521594 155521618 -95166236 + AT_rich Low_complexity Low_complexity 1 24 0 2147 110 7 0 chr2 155522170 155522470 -95165384 - AluSg SINE Alu -8 302 1 26 50 0 0 chr2 155522546 155522586 -95165268 + AT_rich Low_complexity Low_complexity 1 40 0 420 229 7 57 chr2 155524305 155524752 -95163102 + GA-rich Low_complexity Low_complexity 1 424 0 1685 120 96 4 chr2 155525107 155525357 -95162497 + AluSc SINE Alu 1 273 -36 468 0 0 0 chr2 155525357 155525409 -95162445 + (CA)n Simple_repeat Simple_repeat 1 52 0 38656 37 3 1 chr2 155525455 155530975 -95156879 - L1PA4 LINE L1 0 6155 623 785 42 0 0 chr2 155530975 155531071 -95156783 - L1PA4 LINE L1 -6050 96 1 261 340 16 63 chr2 155531089 155531280 -95156574 - L1ME4a LINE L1 -70 6051 5870 194 280 0 0 chr2 155531415 155531465 -95156389 - L2 LINE L2 -1 3312 3263 1271 204 74 41 chr2 155532201 155532568 -95155286 - MLT1B LTR MaLR -11 379 1 328 256 135 33 chr2 155534609 155534886 -95152968 + L1ME1 LINE L1 72 642 -5780 28 71 0 0 chr2 155534903 155534959 -95152895 + AT_rich Low_complexity Low_complexity 1 56 0 1984 275 103 33 chr2 155535128 155536325 -95151529 + L1ME1 LINE L1 1018 2129 -4812 1661 174 130 18 chr2 155536325 155536710 -95151144 + MSTA LTR MaLR 1 428 0 1984 275 103 33 chr2 155536710 155537717 -95150137 + L1ME1 LINE L1 2129 3472 -3469 621 247 27 27 chr2 155537711 155537974 -95149880 + L1ME1 LINE L1 3770 4032 -2909 * 1434 264 76 21 chr2 155538035 155538600 -95149254 + L1ME1 LINE L1 4282 4877 -2064 192 77 0 0 chr2 155538615 155538641 -95149213 + (T)n Simple_repeat Simple_repeat 1 26 0 2397 198 49 22 chr2 155538776 155539413 -95148441 + L1ME1 LINE L1 5618 6300 -661 2059 111 0 4 chr2 155539413 155539725 -95148129 + AluSg SINE Alu 1 311 0 2397 198 49 22 chr2 155539725 155540069 -95147785 + L1ME1 LINE L1 6300 6633 -328 2049 149 11 25 chr2 155540196 155540559 -95147295 - L1PB4 LINE L1 -5 6151 5794 2042 130 114 5 chr2 155540559 155540928 -95146926 + L1PB4 LINE L1 5384 5792 -364 260 336 75 19 chr2 155541358 155541465 -95146389 + L2 LINE L2 3193 3305 -8 207 304 0 0 chr2 155542317 155542373 -95145481 + (TG)n Simple_repeat Simple_repeat 1 56 0 192 40 0 0 chr2 155542411 155542436 -95145418 + (CTTTA)n Simple_repeat Simple_repeat 2 26 0 548 289 17 29 chr2 155542539 155542712 -95145142 - MER5B DNA MER1_type -3 175 5 2543 173 2 18 chr2 155543109 155543605 -95144249 + L1MA5 LINE L1 3994 4481 -1665 952 235 67 4 chr2 155543632 155543870 -95143984 + AluJo SINE Alu 6 258 -54 6198 170 14 6 chr2 155543878 155545674 -95142180 + L1MA5 LINE L1 4488 6300 0 314 343 58 29 chr2 155545814 155545951 -95141903 - L2 LINE L2 -9 3263 3123 536 335 45 13 chr2 155546168 155546392 -95141462 + MIR SINE MIR 3 233 -29 21 36 0 0 chr2 155546493 155546521 -95141333 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr2 155546572 155546617 -95141237 + AT_rich Low_complexity Low_complexity 1 45 0 182 211 0 0 chr2 155548016 155548054 -95139800 - L2 LINE L2 -2106 1208 1171 430 281 199 19 chr2 155548225 155548446 -95139408 + L2 LINE L2 3012 3286 -27 255 61 0 0 chr2 155548446 155548479 -95139375 + (TA)n Simple_repeat Simple_repeat 2 34 0 430 281 199 19 chr2 155548479 155548513 -95139341 + L2 LINE L2 3286 3313 0 25 0 0 0 chr2 155548562 155548587 -95139267 + AT_rich Low_complexity Low_complexity 1 25 0 317 289 171 43 chr2 155548668 155548948 -95138906 - L2 LINE L2 -158 3155 2840 417 86 0 0 chr2 155549170 155549228 -95138626 + (TA)n Simple_repeat Simple_repeat 1 58 0 1297 139 0 28 chr2 155549640 155549856 -95137998 + AluSg/x SINE Alu 99 308 -1 23 0 0 0 chr2 155550547 155550570 -95137284 + AT_rich Low_complexity Low_complexity 1 23 0 1366 190 3 59 chr2 155551781 155552071 -95135783 + AluJo SINE Alu 1 274 -38 1566 218 5 40 chr2 155552328 155552732 -95135122 + MLT1B LTR MaLR 1 390 0 555 302 43 35 chr2 155553162 155553420 -95134434 + MIR SINE MIR 3 262 0 901 167 13 113 chr2 155553512 155553695 -95134159 - MER20 DNA MER1_type -3 216 61 2134 145 63 27 chr2 155553695 155554108 -95133746 - MSTA LTR MaLR 0 428 1 901 167 13 113 chr2 155554108 155554163 -95133691 - MER20 DNA MER1_type -158 61 2 27 62 0 0 chr2 155555027 155555075 -95132779 + AT_rich Low_complexity Low_complexity 1 48 0 289 239 18 9 chr2 155555081 155555190 -95132664 + (TA)n Simple_repeat Simple_repeat 1 110 0 217 89 33 56 chr2 155555202 155555292 -95132562 + (TA)n Simple_repeat Simple_repeat 2 89 0 26 30 0 0 chr2 155555619 155555652 -95132202 + AT_rich Low_complexity Low_complexity 1 33 0 2811 10 0 0 chr2 155557032 155557345 -95130509 - AluYb8 SINE Alu -5 313 1 358 284 18 9 chr2 155557895 155558004 -95129850 + L2 LINE L2 3199 3308 -5 2338 59 3 16 chr2 155558490 155558795 -95129059 - AluY SINE Alu -10 301 1 23 54 0 0 chr2 155560582 155560619 -95127235 + AT_rich Low_complexity Low_complexity 1 37 0 35 54 0 0 chr2 155562592 155562648 -95125206 + AT_rich Low_complexity Low_complexity 1 56 0 2053 117 0 0 chr2 155562771 155563084 -95124770 - AluY SINE Alu 0 313 1 223 333 125 0 chr2 155563236 155563332 -95124522 - L2 LINE L2 -55 3217 3110 232 267 12 47 chr2 155563681 155563755 -95124099 - L2 LINE L2 0 3313 3241 1257 255 32 19 chr2 155563755 155564124 -95123730 + MLT1A2 LTR MaLR 1 374 0 232 267 12 47 chr2 155564124 155564135 -95123719 - L2 LINE L2 -72 3241 3231 1714 312 55 6 chr2 155564243 155564930 -95122924 - L2 LINE L2 -191 3122 2391 1699 136 4 4 chr2 155565487 155565759 -95122095 + L1PB1 LINE L1 5877 6148 -3 2203 107 3 3 chr2 155565876 155566176 -95121678 + AluSx SINE Alu 1 300 -12 552 99 52 17 chr2 155566670 155566842 -95121012 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 204 47 78 31 chr2 155566859 155566923 -95120931 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 718 208 0 0 chr2 155567745 155567875 -95119979 - FLAM_A SINE Alu -3 130 1 229 322 107 33 chr2 155569424 155569545 -95118309 + L2 LINE L2 3141 3270 -2 905 282 128 42 chr2 155570373 155570976 -95116878 + MLT2F LTR ERVL 1 655 -8 185 192 0 19 chr2 155571236 155571288 -95116566 + (TA)n Simple_repeat Simple_repeat 2 52 0 2118 120 3 0 chr2 155571352 155571636 -95116218 + AluSp SINE Alu 2 286 -27 244 0 0 0 chr2 155571636 155571663 -95116191 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 32 67 0 0 chr2 155571829 155571889 -95115965 + AT_rich Low_complexity Low_complexity 1 60 0 * 2767 129 18 19 chr2 155571888 155572401 -95115453 + MER57-int LTR ERV1 4401 4912 -2625 8536 117 25 5 chr2 155572401 155573737 -95114117 - MER57A-int LTR ERV1 -3163 4374 3012 892 130 8 0 chr2 155573737 155573868 -95113986 - MER57A-int LTR ERV1 -4629 2908 2777 * 945 143 14 0 chr2 155573863 155574010 -95113844 - MER57A-int LTR ERV1 -3932 2014 1866 * 3770 150 39 24 chr2 155574009 155574675 -95113179 - MER57A-int LTR ERV1 -5166 2371 1696 * 7958 136 46 4 chr2 155574655 155575873 -95111981 - MER57A-int LTR ERV1 -6268 1269 1 2191 166 18 0 chr2 155575877 155576269 -95111585 - MER57A LTR ERV1 -4 399 1 986 216 65 119 chr2 155576278 155576817 -95111037 + L1MC5 LINE L1 6673 7240 -721 1618 148 183 30 chr2 155576817 155577188 -95110666 + MSTA LTR MaLR 1 428 0 7927 137 80 50 chr2 155577190 155578721 -95109133 + MSTA-int LTR MaLR 3 1580 0 1203 176 97 84 chr2 155578721 155578896 -95108958 + THE1C LTR MaLR 1 172 -203 399 41 0 0 chr2 155578896 155578945 -95108909 + (TC)n Simple_repeat Simple_repeat 1 49 0 1203 176 97 84 chr2 155578945 155579139 -95108715 + THE1C LTR MaLR 172 375 0 986 216 65 119 chr2 155579139 155579183 -95108671 + L1MC5 LINE L1 7183 7228 -733 814 213 122 84 chr2 155579370 155579919 -95107935 + L1MC5 LINE L1 7339 7908 -53 248 0 31 0 chr2 155579968 155580000 -95107854 + (CA)n Simple_repeat Simple_repeat 2 34 0 2995 173 77 39 chr2 155580549 155581249 -95106605 + LTR8A LTR ERV1 1 727 0 394 239 0 0 chr2 155582178 155582271 -95105583 + AluJ/FLAM SINE Alu 1 73 -229 337 275 113 28 chr2 155582642 155582784 -95105070 - MIR3 SINE MIR -4 204 51 386 343 97 9 chr2 155583135 155583351 -95104503 - MIR SINE MIR -24 238 4 248 284 62 0 chr2 155584781 155584862 -95102992 + L2 LINE L2 3183 3268 -4 22 0 0 0 chr2 155585122 155585144 -95102710 + AT_rich Low_complexity Low_complexity 1 22 0 1671 132 120 0 chr2 155585247 155585513 -95102341 + AluSg SINE Alu 1 298 -2 416 266 31 23 chr2 155585633 155585761 -95102093 - MIR SINE MIR -61 201 73 2715 91 3 3 chr2 155586177 155586541 -95101313 + THE1B LTR MaLR 1 364 0 711 281 71 4 chr2 155587213 155587451 -95100403 + MIR SINE MIR 9 262 0 1599 142 0 0 chr2 155587691 155587923 -95099931 + AluJb SINE Alu 1 232 -80 404 311 34 8 chr2 155588949 155589068 -95098786 + L2 LINE L2 3146 3267 -5 180 0 0 0 chr2 155591230 155591250 -95096604 + (T)n Simple_repeat Simple_repeat 1 20 0 4745 164 64 6 chr2 155591657 155592235 -95095619 - L1MA8 LINE L1 -11 6280 5626 198 0 0 0 chr2 155592235 155592257 -95095597 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 4745 164 64 6 chr2 155592257 155592620 -95095234 - L1MA8 LINE L1 -665 5626 5285 31 76 0 0 chr2 155592646 155592712 -95095142 + AT_rich Low_complexity Low_complexity 1 66 0 212 250 28 28 chr2 155592841 155592913 -95094941 + MIR SINE MIR 121 192 -70 1915 142 36 21 chr2 155593079 155593410 -95094444 + MER1B DNA MER1_type 2 337 0 2468 60 0 29 chr2 155593916 155594230 -95093624 - AluY SINE Alu -6 305 1 493 223 84 79 chr2 155594264 155594466 -95093388 - MER67D LTR ERV1 -6 508 306 1157 186 17 63 chr2 155594511 155594812 -95093042 - MER67D LTR ERV1 -203 311 25 341 219 52 83 chr2 155594900 155594996 -95092858 + MER5B DNA MER1_type 64 156 -22 1865 224 118 26 chr2 155595141 155595726 -95092128 - LTR48B LTR ERV1 0 644 6 740 303 93 33 chr2 155595884 155596370 -95091484 + MLT1L LTR MaLR 99 613 -2 234 336 74 27 chr2 155596529 155596678 -95091176 + L2 LINE L2 3116 3271 -1 2340 246 72 43 chr2 155597996 155599709 -95088145 + L1ME2 LINE L1 4420 6333 -1 192 347 40 46 chr2 155599923 155600096 -95087758 + MIR SINE MIR 18 147 -61 690 146 0 0 chr2 155601289 155601419 -95086435 - L1P LINE L1 -779 5387 5258 1009 202 5 5 chr2 155601428 155601651 -95086203 - L1 LINE L1 -1269 4877 4655 4112 131 65 21 chr2 155601651 155602370 -95085484 + L1PA16 LINE L1 5412 6163 -3 1495 179 4 29 chr2 155602809 155603082 -95084772 + AluJo SINE Alu 22 287 -25 26 0 0 0 chr2 155603143 155603169 -95084685 + AT_rich Low_complexity Low_complexity 1 26 0 2701 82 3 0 chr2 155603262 155603616 -95084238 + THE1A LTR MaLR 1 355 0 11138 106 10 2 chr2 155603616 155605184 -95082670 + THE1A-int LTR MaLR 1 1580 0 2680 85 3 0 chr2 155605184 155605538 -95082316 + THE1A LTR MaLR 1 355 0 590 201 49 34 chr2 155607056 155607233 -95080621 + MER110 LTR ERV1 326 476 0 2462 70 0 3 chr2 155608168 155608480 -95079374 - AluY SINE Alu 0 311 1 343 308 76 25 chr2 155608606 155608801 -95079053 + L1MC/D LINE L1 5272 5477 -689 494 248 178 19 chr2 155608801 155608958 -95078896 - MER5A DNA MER1_type -1 188 7 216 0 0 0 chr2 155610522 155610546 -95077308 + (A)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr2 155610618 155610646 -95077208 + AT_rich Low_complexity Low_complexity 1 28 0 225 0 0 0 chr2 155611855 155611880 -95075974 + (A)n Simple_repeat Simple_repeat 1 25 0 1818 171 59 11 chr2 155612123 155612479 -95075375 - L1MB3 LINE L1 -297 5886 5514 24 0 0 0 chr2 155613939 155613963 -95073891 + AT_rich Low_complexity Low_complexity 1 24 0 28 29 0 0 chr2 155614378 155614413 -95073441 + AT_rich Low_complexity Low_complexity 1 35 0 340 359 18 49 chr2 155614869 155615092 -95072762 - L2 LINE L2 -464 2850 2635 346 363 42 44 chr2 155615195 155615652 -95072202 - L2 LINE L2 -902 2412 1957 227 274 73 112 chr2 155616030 155616209 -95071645 - LTR16A LTR ERVL -260 190 19 214 273 0 0 chr2 155616244 155616288 -95071566 + L2 LINE L2 3219 3262 -10 212 324 133 50 chr2 155616342 155616799 -95071055 + L2 LINE L2 2805 3299 -14 25 51 0 0 chr2 155616861 155616900 -95070954 + AT_rich Low_complexity Low_complexity 1 39 0 251 220 0 0 chr2 155617577 155617627 -95070227 - MER5A DNA MER1_type -4 185 136 224 230 159 71 chr2 155617596 155617722 -95070132 + MER5A DNA MER1_type 35 171 -18 * 303 301 156 29 chr2 155618015 155618188 -95069666 - MER117 DNA MER1_type 0 197 3 474 18 0 0 chr2 155619077 155619132 -95068722 + (CA)n Simple_repeat Simple_repeat 2 56 0 2277 107 0 3 chr2 155619235 155619651 -95068203 - AluSq SINE Alu 0 416 2 392 221 12 0 chr2 155620134 155620220 -95067634 + L1MC/D LINE L1 5733 5819 -1989 1116 93 0 0 chr2 155620396 155620547 -95067307 + L1PA8 LINE L1 6020 6170 -2 617 293 69 17 chr2 155620672 155620904 -95066950 + MIR SINE MIR 19 262 0 2383 88 3 3 chr2 155621201 155621508 -95066346 - AluSg SINE Alu -3 307 1 4080 123 36 7 chr2 155621539 155622212 -95065642 - L1MA2 LINE L1 0 7723 7032 2169 95 25 9 chr2 155622215 155622612 -95065242 - LTR7 LTR ERV1 -2 448 1 19704 162 34 15 chr2 155622615 155626711 -95061143 - L1MA2 LINE L1 -691 7032 2749 1737 166 0 0 chr2 155626711 155626989 -95060865 - AluSq SINE Alu -15 298 21 19704 162 34 15 chr2 155626989 155629783 -95058071 - L1MA2 LINE L1 -4974 2749 10 422 159 24 159 chr2 155629783 155629990 -95057864 + MER4B-int LTR ERV1 2298 2476 -4282 899 153 10 45 chr2 155630083 155630285 -95057569 + MER4B-int LTR ERV1 3536 3730 -2868 956 206 58 33 chr2 155630366 155630890 -95056964 + MER4B-int LTR ERV1 2666 2950 -1986 289 315 65 4 chr2 155631233 155631368 -95056486 - MLT1H1 LTR MaLR -362 187 2 1488 283 151 8 chr2 155631440 155631942 -95055912 + MLT2E LTR ERVL 55 628 0 484 304 67 57 chr2 155632249 155632532 -95055322 - MLT1I LTR MaLR -50 359 74 1409 160 0 0 chr2 155633145 155633351 -95054503 + AluSx SINE Alu 1 206 -106 254 188 21 0 chr2 155633430 155633478 -95054376 - MER110 LTR ERV1 -336 155 107 292 355 45 0 chr2 155634018 155634128 -95053726 - MIR3 SINE MIR -49 159 45 272 347 45 50 chr2 155635071 155635108 -95052746 + MIR SINE MIR 57 93 -169 1915 188 75 15 chr2 155635108 155635576 -95052278 + LTR54B LTR ERV1 1 496 -2 272 347 45 50 chr2 155635576 155635737 -95052117 + MIR SINE MIR 93 254 -8 186 367 0 0 chr2 155635696 155635756 -95052098 - MIR SINE MIR -155 107 48 * 1064 145 109 87 chr2 155636006 155636282 -95051572 + LTR49 LTR ERV1 1 282 -313 1885 121 28 44 chr2 155636293 155636729 -95051125 + MER51B LTR ERV1 3 377 0 562 208 82 54 chr2 155636765 155636989 -95050865 + LTR29 LTR ERV1 366 638 -15 2274 81 0 28 chr2 155637747 155638067 -95049787 - AluY SINE Alu 0 311 1 1984 134 34 34 chr2 155639876 155640204 -95047650 + MSTC LTR MaLR 1 328 -100 2146 173 77 10 chr2 155640212 155640628 -95047226 + LTR47A LTR ERVL 9 452 0 494 212 20 0 chr2 155640628 155640727 -95047127 + MSTC LTR MaLR 324 424 -4 2271 81 7 7 chr2 155640985 155641282 -95046572 + AluY SINE Alu 1 297 -14 650 106 0 0 chr2 155641616 155641710 -95046144 + AluSg/x SINE Alu 217 310 -2 1010 164 0 0 chr2 155641925 155642105 -95045749 + AluSg/x SINE Alu 134 313 0 334 319 82 24 chr2 155642409 155642616 -95045238 + L1ME2 LINE L1 308 526 -5846 1201 269 133 41 chr2 155643285 155645276 -95042578 + L1ME2 LINE L1 1173 3469 -2913 916 266 100 39 chr2 155645323 155645453 -95042401 + L1ME2 LINE L1 3586 3707 -2675 2124 103 7 20 chr2 155645453 155645754 -95042100 + AluSq SINE Alu 1 297 -16 916 266 100 39 chr2 155645754 155646490 -95041364 + L1ME2 LINE L1 3707 4498 -1884 * 1091 259 71 30 chr2 155646484 155646868 -95040986 + L1ME2 LINE L1 5962 6328 -72 2163 151 20 3 chr2 155646868 155647226 -95040628 + THE1B LTR MaLR 1 364 0 9320 122 89 3 chr2 155647226 155648681 -95039173 + THE1B-int LTR MaLR 1 1580 0 2272 116 11 53 chr2 155648681 155648987 -95038867 + THE1B LTR MaLR 1 290 -74 2363 100 3 3 chr2 155648987 155649298 -95038556 - AluSp SINE Alu -2 311 1 2272 116 11 53 chr2 155649298 155649370 -95038484 + THE1B LTR MaLR 290 363 -1 1091 259 71 30 chr2 155649370 155649389 -95038465 + L1ME2 LINE L1 6327 6384 -16 378 0 0 0 chr2 155649575 155649617 -95038237 + (TG)n Simple_repeat Simple_repeat 2 43 0 207 69 0 0 chr2 155649618 155649647 -95038207 + (GA)n Simple_repeat Simple_repeat 2 30 0 23 0 0 0 chr2 155650128 155650151 -95037703 + AT_rich Low_complexity Low_complexity 1 23 0 207 163 0 47 chr2 155650996 155651039 -95036815 + GA-rich Low_complexity Low_complexity 4 44 0 280 284 0 12 chr2 155651174 155651255 -95036599 + HAL1 LINE L1 1 80 -2427 348 294 98 77 chr2 155651808 155652135 -95035719 + L2 LINE L2 2980 3313 0 246 204 0 54 chr2 155652483 155652576 -95035278 + A-rich Low_complexity Low_complexity 4 91 0 1954 165 0 82 chr2 155652635 155652931 -95034923 - MLT1B LTR MaLR 0 390 138 1485 152 128 35 chr2 155652931 155653274 -95034580 + THE1C LTR MaLR 1 375 0 1954 165 0 82 chr2 155653274 155653402 -95034452 - MLT1B LTR MaLR -252 138 1 23 68 0 0 chr2 155653465 155653509 -95034345 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 155653948 155653970 -95033884 + AT_rich Low_complexity Low_complexity 1 22 0 2148 102 3 0 chr2 155654845 155655129 -95032725 + AluSx SINE Alu 1 285 -27 242 231 26 26 chr2 155655581 155655659 -95032195 + LTR33A LTR ERVL 433 510 -13 1064 234 63 29 chr2 155655812 155656189 -95031665 - MSTC LTR MaLR 0 428 1 266 330 0 0 chr2 155657949 155658043 -95029811 - LTR16A LTR ERVL -44 406 313 328 339 62 27 chr2 155658056 155658280 -95029574 - ERVL LTR ERVL -621 5143 4912 2144 120 3 0 chr2 155659931 155660254 -95027600 + AluSp SINE Alu 3 313 0 3185 98 2 14 chr2 155660258 155660759 -95027095 - L1P LINE L1 -2567 3579 3085 1572 70 0 0 chr2 155660760 155660961 -95026893 + L1PA7 LINE L1 5952 6152 -2 5762 173 26 19 chr2 155661375 155662438 -95025416 - L1MA4 LINE L1 -47 6253 5199 186 43 0 0 chr2 155662438 155662461 -95025393 + (CCTG)n Simple_repeat Simple_repeat 1 23 0 264 30 0 0 chr2 155662461 155662494 -95025360 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 5762 173 26 19 chr2 155662494 155663705 -95024149 - L1MA4 LINE L1 -1100 5200 3952 219 240 40 0 chr2 155663773 155663823 -95024031 + GA-rich Low_complexity Low_complexity 3 54 0 228 283 0 0 chr2 155663970 155664023 -95023831 - MLT1H1 LTR MaLR -470 85 33 706 234 58 13 chr2 155664023 155664177 -95023677 + FRAM SINE Alu 1 160 -16 263 182 0 0 chr2 155664178 155664222 -95023632 - MLT1H1 LTR MaLR -511 44 1 21 71 0 0 chr2 155664832 155664874 -95022980 + AT_rich Low_complexity Low_complexity 1 42 0 245 295 18 36 chr2 155664883 155664995 -95022859 - L1MC4a LINE L1 -1644 6164 6055 499 193 30 37 chr2 155666483 155666618 -95021236 - L1MA3 LINE L1 -1 6304 6171 21 0 0 0 chr2 155666630 155666651 -95021203 + AT_rich Low_complexity Low_complexity 1 21 0 450 176 321 15 chr2 155666753 155666884 -95020970 + MER5A DNA MER1_type 19 189 0 294 226 278 0 chr2 155666915 155667030 -95020824 + MER5A DNA MER1_type 42 188 -1 180 254 55 18 chr2 155666981 155667036 -95020818 + L3 LINE CR1 447 503 -1074 * 735 153 45 40 chr2 155667213 155667389 -95020465 - MER53 DNA DNA -12 177 1 1882 137 34 65 chr2 155667857 155668244 -95019610 + THE1C LTR MaLR 1 375 0 360 296 136 12 chr2 155669149 155669392 -95018462 - L1ME3 LINE L1 -216 5946 5674 438 134 144 21 chr2 155669419 155669516 -95018338 + MER5A DNA MER1_type 4 112 -77 266 278 208 7 chr2 155669537 155669681 -95018173 - L1ME3 LINE L1 -514 5650 5478 246 239 80 31 chr2 155669809 155669972 -95017882 - L1ME3 LINE L1 -773 5373 5203 2126 116 14 0 chr2 155669984 155670277 -95017577 - AluSx SINE Alu -15 297 1 2568 143 9 14 chr2 155670475 155670908 -95016946 + MSTB1 LTR MaLR 2 432 0 1205 210 40 16 chr2 155672219 155672471 -95015383 - AluJo SINE Alu -51 261 4 21 36 0 0 chr2 155673376 155673404 -95014450 + AT_rich Low_complexity Low_complexity 1 28 0 25 65 0 0 chr2 155674203 155674249 -95013605 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr2 155674482 155674504 -95013350 + AT_rich Low_complexity Low_complexity 1 22 0 278 378 130 4 chr2 155675424 155675694 -95012160 + L2 LINE L2 2398 2701 -613 32 57 0 0 chr2 155677870 155677923 -95009931 + AT_rich Low_complexity Low_complexity 1 53 0 22 35 0 0 chr2 155678255 155678284 -95009570 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr2 155678376 155678406 -95009448 + AT_rich Low_complexity Low_complexity 1 30 0 2209 179 38 7 chr2 155678581 155679028 -95008826 - MER65C LTR ERV1 0 461 1 1963 228 80 19 chr2 155679301 155679827 -95008027 - MER74A LTR ERVL 0 558 1 578 233 8 8 chr2 155681143 155681263 -95006591 - FLAM_A SINE Alu -13 120 1 262 200 0 24 chr2 155681763 155681848 -95006006 + (TG)n Simple_repeat Simple_repeat 2 84 0 1785 290 139 31 chr2 155682094 155683161 -95004693 - L2 LINE L2 -1 3312 2119 981 232 79 40 chr2 155683305 155683633 -95004221 + MER58B DNA MER1_type 1 341 0 240 35 0 0 chr2 155683694 155683723 -95004131 + (TG)n Simple_repeat Simple_repeat 1 29 0 272 346 75 8 chr2 155685375 155685508 -95002346 - MIR SINE MIR -56 206 65 724 217 25 12 chr2 155686277 155686438 -95001416 + MER3 DNA MER1_type 5 167 -42 298 340 68 42 chr2 155686903 155687094 -95000760 + MIR SINE MIR 1 196 -66 2213 125 42 31 chr2 155687247 155687607 -95000247 + THE1B LTR MaLR 1 364 0 447 297 55 25 chr2 155688591 155688793 -94999061 - MIR SINE MIR -35 227 20 376 327 146 0 chr2 155688876 155689102 -94998752 - MIR SINE MIR -2 260 2 2101 174 35 33 chr2 155691016 155691566 -94996288 + MLT2A2 LTR ERVL 1 554 0 2628 45 0 0 chr2 155692276 155692587 -94995267 + AluY SINE Alu 1 311 0 711 226 30 57 chr2 155693295 155693525 -94994329 - MIR SINE MIR -13 249 26 483 284 63 31 chr2 155693916 155694138 -94993716 + MIR SINE MIR 20 248 -14 4161 189 53 40 chr2 155694178 155695680 -94992174 - L1MA9 LINE L1 -34 6278 4767 339 192 41 0 chr2 155696187 155696260 -94991594 + MER116 DNA Mariner 5 80 0 260 366 37 55 chr2 155697942 155698106 -94989748 + MIR3 SINE MIR 37 197 -11 256 359 39 0 chr2 155701558 155701661 -94986193 - L2 LINE L2 -8 3305 3199 601 293 80 44 chr2 155702311 155702560 -94985294 + MIR SINE MIR 5 262 0 317 300 53 47 chr2 155703129 155703279 -94984575 + MLT1H LTR MaLR 82 232 -317 216 256 0 0 chr2 155703286 155703329 -94984525 + polypyrimidine Low_complexity Low_complexity 1 43 0 643 245 86 59 chr2 155703342 155703617 -94984237 + MLT1H LTR MaLR 250 610 -14 432 0 0 0 chr2 155705517 155705565 -94982289 + (TTTTG)n Simple_repeat Simple_repeat 1 48 0 1926 124 3 7 chr2 155705565 155705841 -94982013 - AluSx SINE Alu -32 280 6 25 31 0 0 chr2 155706926 155706958 -94980896 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 155707942 155707971 -94979883 + AT_rich Low_complexity Low_complexity 1 29 0 242 277 33 68 chr2 155709450 155709655 -94978199 + MIR SINE MIR 17 261 -1 216 0 0 0 chr2 155709872 155709896 -94977958 + (TTG)n Simple_repeat Simple_repeat 2 25 0 215 313 174 9 chr2 155710109 155710224 -94977630 + MIR SINE MIR 2 135 -127 330 140 0 0 chr2 155710426 155710476 -94977378 + MSTC LTR MaLR 3 52 -376 * 600 168 150 0 chr2 155710469 155710582 -94977272 - MSTC LTR MaLR -298 130 1 * 778 214 85 80 chr2 155710582 155711033 -94976821 - MLT1A2 LTR MaLR -16 449 11 1825 304 80 40 chr2 155711081 155712076 -94975778 - L2 LINE L2 -475 2839 1805 253 293 88 75 chr2 155712107 155712254 -94975600 + MER5B DNA MER1_type 29 177 -1 304 357 25 35 chr2 155712256 155712539 -94975315 - L2 LINE L2 -1517 1797 1518 251 321 57 36 chr2 155713328 155713468 -94974386 + L1ME LINE L1 5676 5818 -303 2114 101 7 7 chr2 155715865 155716162 -94971692 - AluY SINE Alu -14 297 1 24 53 0 0 chr2 155717366 155717404 -94970450 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 155717769 155717793 -94970061 + AT_rich Low_complexity Low_complexity 1 24 0 218 194 16 0 chr2 155718264 155718326 -94969528 + GA-rich Low_complexity Low_complexity 2 64 0 545 247 164 63 chr2 155718534 155718821 -94969033 - L2 LINE L2 -1 3312 2997 425 191 122 0 chr2 155719501 155719616 -94968238 - L1MA6 LINE L1 -260 6040 5912 471 161 21 0 chr2 155719616 155719709 -94968145 + L1MA6 LINE L1 6204 6298 -2 257 347 167 7 chr2 155721022 155721172 -94966682 - MIR SINE MIR -41 221 48 23 54 0 0 chr2 155721340 155721377 -94966477 + AT_rich Low_complexity Low_complexity 1 37 0 1746 263 134 16 chr2 155721544 155722057 -94965797 - MLT1E LTR MaLR -19 574 1 430 267 119 54 chr2 155722192 155722469 -94965385 + L2 LINE L2 2999 3293 -20 364 333 0 38 chr2 155722481 155722613 -94965241 + MIR3 SINE MIR 15 141 -67 408 309 29 0 chr2 155724108 155724244 -94963610 - MIR SINE MIR -1 261 122 22 0 0 0 chr2 155724545 155724567 -94963287 + AT_rich Low_complexity Low_complexity 1 22 0 189 333 19 0 chr2 155724848 155724902 -94962952 - L2 LINE L2 -9 3263 3209 1532 278 77 34 chr2 155725307 155725994 -94961860 - HsTC2a DNA Tc2 -3 741 25 301 361 67 48 chr2 155726324 155726532 -94961322 + MIR SINE MIR 2 213 -49 3113 129 6 8 chr2 155726961 155727457 -94960397 - LOR1a LTR ERV1 -2 495 1 4946 174 54 17 chr2 155728177 155729509 -94958345 - L1MA7 LINE L1 -3 6288 4908 23 0 0 0 chr2 155729566 155729589 -94958265 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 155729830 155729860 -94957994 + AT_rich Low_complexity Low_complexity 1 30 0 1903 123 0 41 chr2 155729991 155730309 -94957545 - AluSx SINE Alu -3 309 5 3066 152 0 8 chr2 155730501 155731002 -94956852 - LOR1a LTR ERV1 0 497 1 3002 97 2 2 chr2 155731109 155731530 -94956324 - L1PA13 LINE L1 -14 6149 5729 526 244 107 12 chr2 155731720 155731888 -94955966 + L2 LINE L2 3118 3301 -12 385 356 56 17 chr2 155731951 155732184 -94955670 - MLT1K LTR MaLR -158 430 189 333 217 12 24 chr2 155732240 155732323 -94955531 + MER5A DNA MER1_type 24 105 -84 310 265 93 93 chr2 155732364 155732515 -94955339 - MLT1K LTR MaLR -435 153 3 272 306 24 0 chr2 155732532 155732617 -94955237 - MIR SINE MIR -16 246 160 1105 322 98 46 chr2 155732668 155733004 -94954850 - L2 LINE L2 -117 3196 2879 2965 127 44 6 chr2 155733004 155733483 -94954371 - LOR1a LTR ERV1 0 497 1 1105 322 98 46 chr2 155733483 155734098 -94953756 - L2 LINE L2 -434 2879 2188 325 259 61 3 chr2 155734190 155734334 -94953520 - MLT1I LTR MaLR -190 219 67 2802 7 0 0 chr2 155734671 155734979 -94952875 + AluYa5 SINE Alu 1 308 -3 698 220 132 0 chr2 155735059 155735241 -94952613 + MER58 DNA MER1_type 1 206 -2214 21 0 0 0 chr2 155736111 155736132 -94951722 + AT_rich Low_complexity Low_complexity 1 21 0 1556 209 43 38 chr2 155737224 155737694 -94950160 - Charlie1b DNA MER1_type -1 522 51 265 203 41 24 chr2 155737774 155737897 -94949957 + (TA)n Simple_repeat Simple_repeat 2 126 0 2142 75 0 14 chr2 155738028 155738308 -94949546 + AluY SINE Alu 1 276 -35 268 294 198 41 chr2 155739484 155739681 -94948173 + MIR SINE MIR 8 235 -27 446 278 84 16 chr2 155739701 155739892 -94947962 - MIR SINE MIR -1 261 58 22 70 0 0 chr2 155739955 155739998 -94947856 + AT_rich Low_complexity Low_complexity 1 43 0 622 215 7 22 chr2 155740011 155740146 -94947708 + FLAM_A SINE Alu 1 133 0 1298 207 31 90 chr2 155740158 155740604 -94947250 - MLT1A1 LTR MaLR 0 365 1 1922 160 3 10 chr2 155744046 155744358 -94943496 + AluSx SINE Alu 1 310 -2 297 256 83 83 chr2 155744720 155744841 -94943013 + MIR SINE MIR 33 153 -55 247 239 0 0 chr2 155745824 155745870 -94941984 + polypurine Low_complexity Low_complexity 3 48 0 314 312 91 65 chr2 155746242 155746339 -94941515 + HAL1b LINE L1 103 196 -1152 1351 142 154 27 chr2 155746339 155746599 -94941255 + AluSx SINE Alu 1 293 -9 314 312 91 65 chr2 155746599 155746963 -94940891 + HAL1b LINE L1 196 576 -772 888 319 105 17 chr2 155746971 155747761 -94940093 + L2 LINE L2 2404 3313 0 378 299 143 47 chr2 155751126 155751510 -94936344 - MLT1L LTR MaLR -12 603 183 213 339 97 16 chr2 155751814 155751938 -94935916 + L2 LINE L2 3180 3313 0 411 21 0 0 chr2 155752187 155752235 -94935619 + (CA)n Simple_repeat Simple_repeat 1 48 0 285 316 15 7 chr2 155752243 155752379 -94935475 + L1MC/D LINE L1 5701 5837 -1971 183 359 94 18 chr2 155752712 155752882 -94934972 + MIR SINE MIR 73 255 -7 387 250 121 7 chr2 155753977 155754117 -94933737 + L2 LINE L2 2221 2376 -938 259 371 42 42 chr2 155754345 155754558 -94933296 + L2 LINE L2 2743 2955 -359 302 345 43 0 chr2 155754870 155755079 -94932775 - L1ME LINE L1 -331 5790 5573 273 370 130 0 chr2 155755127 155755319 -94932535 - MIR SINE MIR -38 224 8 26 30 0 0 chr2 155755860 155755893 -94931961 + AT_rich Low_complexity Low_complexity 1 33 0 712 223 0 0 chr2 155755893 155756023 -94931831 + FLAM_A SINE Alu 1 130 -3 1608 219 34 11 chr2 155757038 155757395 -94930459 - MLT1A1 LTR MaLR 0 365 1 189 0 0 0 chr2 155758157 155758178 -94929676 + (A)n Simple_repeat Simple_repeat 1 21 0 2143 95 0 3 chr2 155758364 155758686 -94929168 - AluSx SINE Alu 0 321 1 1473 257 106 2 chr2 155759150 155759602 -94928252 + MLT1D LTR MaLR 3 501 -4 24 0 0 0 chr2 155759900 155759924 -94927930 + AT_rich Low_complexity Low_complexity 1 24 0 5233 58 1 0 chr2 155763787 155764440 -94923414 - L1PA6 LINE L1 0 6154 5501 235 274 69 29 chr2 155764600 155764702 -94923152 + MLT1F1 LTR MaLR 42 147 -420 1159 227 77 54 chr2 155764702 155765090 -94922764 + L1MC3 LINE L1 7213 7609 -176 403 316 7 26 chr2 155765129 155765281 -94922573 + MIR SINE MIR 20 168 -94 1164 282 110 10 chr2 155765368 155765751 -94922103 + LTR16C LTR ERVL 67 487 -4 1537 186 45 72 chr2 155766821 155767354 -94920500 - MLT1E3 LTR MaLR -1 623 32 246 296 61 23 chr2 155767945 155768077 -94919777 - MIR SINE MIR -1 261 125 21 0 0 0 chr2 155768808 155768829 -94919025 + AT_rich Low_complexity Low_complexity 1 21 0 1373 155 0 4 chr2 155769426 155769652 -94918202 + Tigger1 DNA MER2_type 2 226 -2192 1111 41 95 0 chr2 155769652 155769799 -94918055 - AluY SINE Alu -8 303 143 12977 141 19 17 chr2 155769801 155771977 -94915877 + Tigger1 DNA MER2_type 238 2418 0 2724 91 6 0 chr2 155772518 155772880 -94914974 + THE1B LTR MaLR 1 364 0 1570 183 104 54 chr2 155773323 155773766 -94914088 - MLT1C LTR MaLR 0 467 3 407 200 0 0 chr2 155773931 155774006 -94913848 + MER45A DNA AcHobo 95 169 -9 30 0 0 0 chr2 155774359 155774389 -94913465 + AT_rich Low_complexity Low_complexity 1 30 0 2138 150 48 5 chr2 155774718 155775092 -94912762 + MLT1B LTR MaLR 1 390 0 2094 83 7 0 chr2 155775138 155775416 -94912438 - AluY SINE Alu -15 296 17 1303 157 46 32 chr2 155777772 155778075 -94909779 - AluJo SINE Alu 0 307 1 2201 94 3 3 chr2 155778449 155778746 -94909108 + AluSc SINE Alu 1 297 -12 297 321 28 19 chr2 155778910 155779016 -94908838 - L3b LINE CR1 -88 1495 1389 303 282 68 10 chr2 155779253 155779356 -94908498 - MIR SINE MIR -80 182 74 22 0 0 0 chr2 155781510 155781532 -94906322 + AT_rich Low_complexity Low_complexity 1 22 0 425 248 202 0 chr2 155781876 155782005 -94905849 + MER5A DNA MER1_type 29 183 -6 218 214 366 9 chr2 155782348 155782460 -94905394 - MIR3 SINE MIR -11 197 46 315 299 89 4 chr2 155782712 155782851 -94905003 - MIR SINE MIR -42 220 68 23 0 0 0 chr2 155783476 155783499 -94904355 + AT_rich Low_complexity Low_complexity 1 23 0 758 192 0 0 chr2 155784933 155785063 -94902791 + FLAM_A SINE Alu 1 130 -3 411 261 50 0 chr2 155785487 155785606 -94902248 + L1ME LINE L1 5602 5726 -395 201 272 147 59 chr2 155786669 155786805 -94901049 - L2 LINE L2 -10 3303 3156 225 0 0 0 chr2 155790301 155790326 -94897528 + (A)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr2 155790637 155790666 -94897188 + AT_rich Low_complexity Low_complexity 1 29 0 1128 269 145 12 chr2 155793785 155794212 -94893642 + L2 LINE L2 2374 2857 -457 195 129 0 0 chr2 155794212 155794243 -94893611 + (CA)n Simple_repeat Simple_repeat 2 32 0 350 165 258 0 chr2 155794523 155794620 -94893234 + L2 LINE L2 3191 3312 -1 22 35 0 0 chr2 155794664 155794693 -94893161 + AT_rich Low_complexity Low_complexity 1 29 0 338 348 17 8 chr2 155795046 155795164 -94892690 - MIR3 SINE MIR -31 177 59 1925 129 46 0 chr2 155795255 155795535 -94892319 + AluSx SINE Alu 1 293 -19 272 49 25 74 chr2 155797011 155797092 -94890762 + (TTTTG)n Simple_repeat Simple_repeat 1 77 0 297 128 0 0 chr2 155797861 155797908 -94889946 + (GGGAA)n Simple_repeat Simple_repeat 3 49 0 2568 268 144 42 chr2 155798897 155800118 -94887736 + L2 LINE L2 1959 3313 0 212 349 12 12 chr2 155801046 155801129 -94886725 + MIR SINE MIR 7 89 -173 21 0 0 0 chr2 155802067 155802088 -94885766 + AT_rich Low_complexity Low_complexity 1 21 0 749 75 0 0 chr2 155802088 155802195 -94885659 - L1PA13 LINE L1 -3 6160 6054 237 333 33 25 chr2 155803371 155803491 -94884363 + MLT1K LTR MaLR 126 246 -342 195 329 105 20 chr2 155803805 155803957 -94883897 + MIR SINE MIR 92 256 -6 222 156 0 0 chr2 155805099 155805144 -94882710 + (TG)n Simple_repeat Simple_repeat 2 46 0 1416 206 80 67 chr2 155805459 155805920 -94881934 - MLT1C LTR MaLR 0 467 1 257 330 30 20 chr2 155806592 155806692 -94881162 - MER90 LTR ERV1 -16 559 459 232 283 88 38 chr2 155807161 155807320 -94880534 + MER117 DNA MER1_type 2 168 -29 229 208 0 0 chr2 155807561 155807609 -94880245 + MLT1L LTR MaLR 184 231 -384 272 235 15 15 chr2 155807705 155807773 -94880081 + MLT1K LTR MaLR 504 571 -17 309 396 102 8 chr2 155807809 155808064 -94879790 - L2 LINE L2 -850 2464 2186 402 276 53 0 chr2 155808138 155808290 -94879564 - MER112 DNA MER1_type -100 160 1 472 238 21 111 chr2 155809466 155809701 -94878153 + L1MC5 LINE L1 5682 5895 -1913 491 260 101 34 chr2 155809701 155809909 -94877945 + MLT1G1 LTR MaLR 3 224 -371 2472 290 59 32 chr2 155809915 155811276 -94876578 + HERVL-F LTR ERVL 4299 5756 -8 905 282 128 42 chr2 155811276 155811879 -94875975 + MLT2F LTR ERVL 1 655 -8 185 192 0 19 chr2 155812139 155812191 -94875663 + (TA)n Simple_repeat Simple_repeat 2 52 0 2088 120 3 0 chr2 155812255 155812586 -94875268 + AluSp SINE Alu 2 333 0 29 28 0 0 chr2 155812753 155812789 -94875065 + AT_rich Low_complexity Low_complexity 1 36 0 3511 98 6 2 chr2 155812814 155813324 -94874530 + MER57-int LTR ERV1 4401 4912 -2625 8602 117 24 5 chr2 155813324 155814662 -94873192 - MER57A-int LTR ERV1 -3163 4374 3012 889 130 8 0 chr2 155814662 155814793 -94873061 - MER57A-int LTR ERV1 -4629 2908 2777 * 949 143 14 0 chr2 155814788 155814935 -94872919 - MER57A-int LTR ERV1 -3932 2014 1866 * 3735 152 39 24 chr2 155814934 155815600 -94872254 - MER57A-int LTR ERV1 -5166 2371 1696 * 7956 135 47 4 chr2 155815580 155816797 -94871057 - MER57A-int LTR ERV1 -6268 1269 1 2187 166 18 0 chr2 155816801 155817193 -94870661 - MER57A LTR ERV1 -4 399 1 1010 216 65 119 chr2 155817202 155817741 -94870113 + L1MC5 LINE L1 6673 7240 -721 1604 148 183 30 chr2 155817741 155818112 -94869742 + MSTA LTR MaLR 1 428 0 7819 138 80 50 chr2 155818114 155819645 -94868209 + MSTA-int LTR MaLR 3 1580 0 1202 173 97 84 chr2 155819645 155819820 -94868034 + THE1C LTR MaLR 1 172 -203 327 49 0 0 chr2 155819820 155819861 -94867993 + (TC)n Simple_repeat Simple_repeat 1 41 0 1202 173 97 84 chr2 155819861 155820055 -94867799 + THE1C LTR MaLR 172 375 0 1010 216 65 119 chr2 155820055 155820099 -94867755 + L1MC5 LINE L1 7183 7228 -733 873 229 111 73 chr2 155820286 155820835 -94867019 + L1MC5 LINE L1 7339 7908 -53 230 0 33 0 chr2 155820884 155820914 -94866940 + (CA)n Simple_repeat Simple_repeat 2 32 0 2954 173 77 39 chr2 155821463 155822163 -94865691 + LTR8A LTR ERV1 1 727 0 384 239 0 0 chr2 155823092 155823185 -94864669 + AluJ/FLAM SINE Alu 1 73 -229 335 275 113 28 chr2 155823555 155823697 -94864157 - MIR3 SINE MIR -4 204 51 397 347 97 9 chr2 155824048 155824264 -94863590 - MIR SINE MIR -24 238 4 249 284 62 0 chr2 155825695 155825776 -94862078 + L2 LINE L2 3183 3268 -4 22 0 0 0 chr2 155826036 155826058 -94861796 + AT_rich Low_complexity Low_complexity 1 22 0 1641 132 120 0 chr2 155826161 155826427 -94861427 + AluSg SINE Alu 1 298 -2 420 266 31 23 chr2 155826547 155826675 -94861179 - MIR SINE MIR -61 201 73 2692 91 3 3 chr2 155827091 155827455 -94860399 + THE1B LTR MaLR 1 364 0 714 281 71 4 chr2 155828127 155828365 -94859489 + MIR SINE MIR 9 262 0 1570 142 0 0 chr2 155828605 155828837 -94859017 + AluJb SINE Alu 1 232 -80 182 310 60 52 chr2 155829019 155829135 -94858719 - MIR SINE MIR -57 151 35 402 311 34 8 chr2 155829862 155829981 -94857873 + L2 LINE L2 3146 3267 -5 189 0 0 0 chr2 155832143 155832164 -94855690 + (T)n Simple_repeat Simple_repeat 1 21 0 4803 162 64 6 chr2 155832571 155833149 -94854705 - L1MA8 LINE L1 -11 6280 5626 198 0 0 0 chr2 155833149 155833171 -94854683 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 4803 162 64 6 chr2 155833171 155833534 -94854320 - L1MA8 LINE L1 -665 5626 5285 31 76 0 0 chr2 155833560 155833626 -94854228 + AT_rich Low_complexity Low_complexity 1 66 0 209 250 28 28 chr2 155833755 155833827 -94854027 + MIR SINE MIR 121 192 -70 1883 138 36 24 chr2 155833990 155834323 -94853531 + MER1B DNA MER1_type 1 337 0 2441 60 0 29 chr2 155834829 155835144 -94852710 - AluY SINE Alu -5 306 1 490 223 84 79 chr2 155835178 155835380 -94852474 - MER67D LTR ERV1 -6 508 306 1166 186 17 63 chr2 155835425 155835726 -94852128 - MER67D LTR ERV1 -203 311 25 339 219 52 83 chr2 155835814 155835910 -94851944 + MER5B DNA MER1_type 64 156 -22 1865 224 118 26 chr2 155836055 155836640 -94851214 - LTR48B LTR ERV1 0 644 6 767 295 102 33 chr2 155836798 155837280 -94850574 + MLT1L LTR MaLR 99 613 -2 236 336 74 27 chr2 155837439 155837588 -94850266 + L2 LINE L2 3116 3271 -1 639 62 0 0 chr2 155838098 155838178 -94849676 + MADE1 DNA Mariner 1 80 0 504 179 128 0 chr2 155838293 155838410 -94849444 - MIR SINE MIR -27 235 104 189 0 0 0 chr2 155838416 155838437 -94849417 + (GA)n Simple_repeat Simple_repeat 2 22 0 342 306 139 0 chr2 155839006 155839114 -94848740 + MIR SINE MIR 32 154 -108 1696 161 13 28 chr2 155839120 155839437 -94848417 + AluJo SINE Alu 1 312 0 447 275 161 15 chr2 155839487 155839760 -94848094 - MER110 LTR ERV1 -6 485 173 197 347 0 13 chr2 155839965 155840040 -94847814 + MIR SINE MIR 186 259 -3 23 33 0 0 chr2 155840654 155840684 -94847170 + AT_rich Low_complexity Low_complexity 1 30 0 203 365 47 0 chr2 155841133 155841218 -94846636 - L2 LINE L2 -1 3271 3183 25 0 0 0 chr2 155842384 155842409 -94845445 + AT_rich Low_complexity Low_complexity 1 25 0 508 331 12 6 chr2 155842690 155842859 -94844995 + MER5B DNA MER1_type 7 176 -2 182 351 18 0 chr2 155843505 155843562 -94844292 + MIR3 SINE MIR 133 190 -18 213 368 0 0 chr2 155843621 155843697 -94844157 - MIR3 SINE MIR -30 178 103 205 29 59 0 chr2 155843888 155843922 -94843932 + (TA)n Simple_repeat Simple_repeat 1 36 0 931 289 14 7 chr2 155844090 155844367 -94843487 + HsTC2 DNA Tc2 144 422 -1476 362 333 154 0 chr2 155844369 155844525 -94843329 + MER5A DNA MER1_type 7 186 -3 529 269 113 5 chr2 155844528 155844714 -94843140 + HsTC2 DNA Tc2 410 615 -1283 410 228 76 60 chr2 155844715 155844899 -94842955 + HsTC2 DNA Tc2 1714 1900 0 1507 129 52 18 chr2 155845064 155845350 -94842504 - L1MA9 LINE L1 0 6312 6017 228 73 73 24 chr2 155846527 155846568 -94841286 + L1PA6 LINE L1 6026 6068 -86 398 220 88 0 chr2 155846754 155846845 -94841009 + MER5A DNA MER1_type 14 112 -77 203 147 29 0 chr2 155846837 155846871 -94840983 - MER5A DNA MER1_type -114 75 41 * 2863 142 83 32 chr2 155846871 155847434 -94840420 - LTR1 LTR ERV1 0 785 194 923 128 123 68 chr2 155847474 155847709 -94840145 - LTR1 LTR ERV1 -527 258 11 252 22 43 22 chr2 155848578 155848624 -94839230 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 267 206 76 87 chr2 155849591 155849683 -94838171 - MIR SINE MIR -79 183 93 21 0 0 0 chr2 155849835 155849856 -94837998 + AT_rich Low_complexity Low_complexity 1 21 0 1735 133 61 0 chr2 155851209 155851473 -94836381 + AluSx SINE Alu 1 280 -32 387 0 0 0 chr2 155851474 155851517 -94836337 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 193 263 18 0 chr2 155852588 155852645 -94835209 - L2 LINE L2 0 3272 3215 771 193 176 0 chr2 155853144 155853320 -94834534 - MER6B DNA MER2_type -3 207 1 24 32 0 0 chr2 155853393 155853424 -94834430 + AT_rich Low_complexity Low_complexity 1 31 0 742 275 47 4 chr2 155854889 155855125 -94832729 + Charlie8 DNA MER1_type 3 248 -2169 21 57 0 0 chr2 155858362 155858397 -94829457 + AT_rich Low_complexity Low_complexity 1 35 0 2207 74 0 3 chr2 155858699 155859025 -94828829 - AluY SINE Alu 0 325 1 536 0 16 0 chr2 155859094 155859158 -94828696 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 288 77 0 0 chr2 155859158 155859197 -94828657 + (GGAGA)n Simple_repeat Simple_repeat 5 43 0 414 237 108 17 chr2 155859417 155859612 -94828242 - MIR SINE MIR -1 261 12 384 245 163 0 chr2 155859886 155859984 -94827870 + FLAM_A SINE Alu 2 115 -18 1786 178 0 13 chr2 155862139 155862443 -94825411 + AluJb SINE Alu 1 300 -12 284 327 0 9 chr2 155863027 155863137 -94824717 - MIR SINE MIR -3 259 151 29 0 0 0 chr2 155863504 155863533 -94824321 + AT_rich Low_complexity Low_complexity 1 29 0 411 267 22 39 chr2 155864270 155864450 -94823404 + MER5B DNA MER1_type 1 177 -1 29 60 0 0 chr2 155864896 155864946 -94822908 + AT_rich Low_complexity Low_complexity 1 50 0 36 40 0 0 chr2 155866075 155866125 -94821729 + AT_rich Low_complexity Low_complexity 1 50 0 1578 175 13 25 chr2 155866241 155866555 -94821299 - AluJb SINE Alu -2 310 1 229 322 107 33 chr2 155867967 155868088 -94819766 - L2 LINE L2 -2 3270 3141 294 299 0 0 chr2 155868562 155868639 -94819215 - MIR SINE MIR -180 82 6 488 251 56 34 chr2 155868982 155869161 -94818693 - L2 LINE L2 -34 3279 3097 599 304 47 9 chr2 155869529 155869743 -94818111 + MIR SINE MIR 13 234 -28 24 0 0 0 chr2 155869979 155870003 -94817851 + AT_rich Low_complexity Low_complexity 1 24 0 1274 261 109 26 chr2 155870168 155870662 -94817192 + L1ME1 LINE L1 57 591 -5805 5296 235 56 88 chr2 155870663 155870711 -94817143 + L1ME1 LINE L1 2919 2967 -3268 1900 130 9 51 chr2 155870711 155871026 -94816828 + AluSx SINE Alu 3 304 -8 5296 235 56 88 chr2 155871026 155871786 -94816068 + L1ME1 LINE L1 2967 3750 -2485 2182 116 0 0 chr2 155871786 155872089 -94815765 + AluSq SINE Alu 1 303 -10 5296 235 56 88 chr2 155872089 155873727 -94814127 + L1ME1 LINE L1 3750 5270 -965 2155 95 3 0 chr2 155873727 155874035 -94813819 + AluSq SINE Alu 1 309 0 5296 235 56 88 chr2 155874035 155874966 -94812888 + L1ME1 LINE L1 5270 6230 -5 219 36 0 0 chr2 155874994 155875022 -94812832 + (GA)n Simple_repeat Simple_repeat 2 29 0 180 237 43 65 chr2 155875153 155875246 -94812608 + MIR SINE MIR 145 235 -27 303 71 0 0 chr2 155876253 155876295 -94811559 + (TA)n Simple_repeat Simple_repeat 2 43 0 216 363 33 0 chr2 155877817 155877908 -94809946 - L2 LINE L2 -240 3032 2939 474 301 32 85 chr2 155879419 155879735 -94808119 - L2 LINE L2 -92 3221 2923 1054 173 139 0 chr2 155879890 155880185 -94807669 + MER7A DNA MER2_type 1 333 -4 26 30 0 0 chr2 155880261 155880294 -94807560 + AT_rich Low_complexity Low_complexity 1 33 0 1417 97 3 2 chr2 155880794 155881119 -94806735 + THE1C LTR MaLR 1 375 0 9465 118 39 58 chr2 155881119 155882581 -94805273 + THE1C-int LTR MaLR 1 1433 -147 1835 153 6 50 chr2 155882581 155882901 -94804953 - AluSx SINE Alu -2 310 5 9465 118 39 58 chr2 155882901 155883036 -94804818 + THE1C-int LTR MaLR 1433 1569 -11 2490 110 19 11 chr2 155883040 155883412 -94804442 + THE1C LTR MaLR 1 375 0 23 68 0 0 chr2 155885284 155885328 -94802526 + AT_rich Low_complexity Low_complexity 1 44 0 248 370 110 6 chr2 155885489 155885662 -94802192 - MIR SINE MIR -54 208 18 22 0 0 0 chr2 155886160 155886182 -94801672 + AT_rich Low_complexity Low_complexity 1 22 0 240 271 57 66 chr2 155886649 155886771 -94801083 + L2 LINE L2 3190 3310 -3 568 14 0 0 chr2 155889895 155889964 -94797890 + AluY SINE Alu 228 296 -13 301 327 10 0 chr2 155890039 155890140 -94797714 + (CATA)n Simple_repeat Simple_repeat 2 103 0 6901 185 39 38 chr2 155890355 155890890 -94796964 - L1MA5 LINE L1 -1 6885 6352 279 0 0 0 chr2 155890890 155890921 -94796933 + (CA)n Simple_repeat Simple_repeat 2 32 0 6901 185 39 38 chr2 155890921 155892828 -94795026 - L1MA5 LINE L1 -534 6352 4452 279 192 0 0 chr2 155892826 155892878 -94794976 + L1M1 LINE L1 2964 3015 -4550 * 2084 211 45 10 chr2 155893859 155894367 -94793487 - L1MA5 LINE L1 -4711 1942 1417 2390 117 17 8 chr2 155894367 155894726 -94793128 - THE1B LTR MaLR 0 364 3 6240 126 15 18 chr2 155894728 155895687 -94792167 - THE1B-int LTR MaLR 0 1580 625 2607 110 3 0 chr2 155895698 155896061 -94791793 - THE1B LTR MaLR 0 364 1 1953 294 12 2 chr2 155896063 155896543 -94791311 - L1MA5 LINE L1 -5234 1419 935 276 273 34 34 chr2 155896571 155896659 -94791195 - L1MA5 LINE L1 -6287 366 279 232 279 0 16 chr2 155896703 155896764 -94791090 - L1MA5 LINE L1 -6316 337 278 440 305 37 37 chr2 155896811 155897001 -94790853 - L1M3de LINE L1 -5665 988 799 5026 99 58 48 chr2 155897038 155898232 -94789622 - pTR5 LTR ERV1 0 2606 1520 391 285 50 60 chr2 155898283 155898647 -94789207 - L1M3de LINE L1 -5558 1095 565 313 304 13 0 chr2 155898704 155898783 -94789071 + L2 LINE L2 2552 2631 -683 384 285 84 84 chr2 155898827 155899041 -94788813 - MIR SINE MIR -48 214 1 318 335 84 40 chr2 155899851 155900102 -94787752 - MIR SINE MIR 0 262 1 1626 201 54 82 chr2 155900851 155901313 -94786541 - MER39 LTR ERV1 0 707 259 233 286 31 41 chr2 155901289 155901387 -94786467 - LTR48B LTR ERV1 -547 97 1 * 1933 132 0 30 chr2 155901708 155902042 -94785812 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 155903112 155903137 -94784717 + AT_rich Low_complexity Low_complexity 1 25 0 862 46 9 0 chr2 155903142 155903251 -94784603 - L1PA7 LINE L1 -1 6153 6044 665 350 51 17 chr2 155903258 155903717 -94784137 - L2 LINE L2 -262 3051 2553 1059 230 92 48 chr2 155903720 155904055 -94783799 + MLT1A2 LTR MaLR 25 374 0 194 275 44 66 chr2 155904073 155904164 -94783690 - L2 LINE L2 -779 2535 2447 582 325 28 0 chr2 155904288 155904500 -94783354 - L2 LINE L2 -942 2372 2155 542 130 62 3 chr2 155904761 155905087 -94782767 + (TA)n Simple_repeat Simple_repeat 1 345 0 547 81 64 17 chr2 155905099 155905271 -94782583 + (TA)n Simple_repeat Simple_repeat 1 180 0 52 58 0 0 chr2 155905371 155905458 -94782396 + AT_rich Low_complexity Low_complexity 1 87 0 249 320 37 65 chr2 155905517 155905811 -94782043 - L2 LINE L2 -1603 1711 1426 2442 46 7 29 chr2 155905825 155906132 -94781722 - AluY SINE Alu -11 300 1 26 0 0 0 chr2 155906260 155906286 -94781568 + AT_rich Low_complexity Low_complexity 1 26 0 2301 111 0 6 chr2 155906457 155906772 -94781082 - AluSp SINE Alu 0 313 1 227 175 35 18 chr2 155906934 155906991 -94780863 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 21 0 0 0 chr2 155908252 155908273 -94779581 + AT_rich Low_complexity Low_complexity 1 21 0 242 226 11 54 chr2 155908421 155908514 -94779340 + L1ME4a LINE L1 5977 6065 -56 1834 187 100 27 chr2 155908895 155909434 -94778420 - MER4E LTR ERV1 0 779 104 3059 151 86 12 chr2 155909434 155910004 -94777850 - LTR9 LTR ERV1 0 612 1 1834 187 100 27 chr2 155910004 155910117 -94777737 - MER4E LTR ERV1 -675 104 1 2089 94 17 0 chr2 155910132 155910420 -94777434 - AluSx SINE Alu -16 296 4 203 278 79 40 chr2 155911343 155911469 -94776385 + L3 LINE CR1 150 280 -1297 213 94 0 0 chr2 155911744 155911776 -94776078 + (CA)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr2 155912512 155912535 -94775319 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2046 58 4 0 chr2 155912535 155912793 -94775061 - L1PA7 LINE L1 -14 6140 5882 3255 167 35 59 chr2 155912801 155913509 -94774345 - LTR8 LTR ERV1 0 691 1 1682 188 148 5 chr2 155915739 155916139 -94771715 - MSTB2 LTR MaLR 0 457 1 212 143 48 0 chr2 155916774 155916816 -94771038 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 285 322 13 4 chr2 155916851 155917075 -94770779 - L1MC/D LINE L1 -342 5822 5648 623 244 120 31 chr2 155917084 155917309 -94770545 + MIR SINE MIR 18 262 0 257 262 58 58 chr2 155917397 155917500 -94770354 - L1MC/D LINE L1 -2182 5626 5524 186 208 0 0 chr2 155917551 155917604 -94770250 + (TA)n Simple_repeat Simple_repeat 1 53 0 9045 35 3 2 chr2 155917616 155918686 -94769168 - MER11C LTR ERVK 0 1071 1 360 298 19 63 chr2 155918724 155918929 -94768925 - L1MC/D LINE L1 -749 5397 5202 225 163 0 0 chr2 155919593 155919642 -94768212 - LTR66 LTR ERVL -172 438 390 502 166 7 26 chr2 155919690 155919841 -94768013 + (TA)n Simple_repeat Simple_repeat 2 149 0 2129 116 0 0 chr2 155919843 155920119 -94767735 - AluSc SINE Alu -31 278 3 2297 161 30 23 chr2 155920808 155921237 -94766617 - MSTB1 LTR MaLR 0 432 1 1797 99 0 8 chr2 155922232 155922474 -94765380 + AluSg SINE Alu 57 296 -14 22 0 0 0 chr2 155922781 155922803 -94765051 + AT_rich Low_complexity Low_complexity 1 22 0 916 186 66 51 chr2 155922883 155923238 -94764616 - MSTB2 LTR MaLR 0 457 8 226 297 223 39 chr2 155923243 155923299 -94764555 + L3 LINE CR1 1168 1212 -365 2182 120 10 0 chr2 155923299 155923600 -94764254 + AluSx SINE Alu 1 304 -8 226 297 223 39 chr2 155923600 155923880 -94763974 + L3 LINE CR1 1212 1566 -11 239 326 82 76 chr2 155923953 155924030 -94763824 + L3 LINE CR1 1345 1420 -157 489 220 30 23 chr2 155924030 155924162 -94763692 - MER94 DNA DNA -1 133 1 239 326 82 76 chr2 155924162 155924268 -94763586 + L3 LINE CR1 1420 1529 -48 23 0 0 0 chr2 155924301 155924324 -94763530 + AT_rich Low_complexity Low_complexity 1 23 0 2206 125 3 0 chr2 155924814 155925109 -94762745 + AluSx SINE Alu 3 298 -14 207 246 0 0 chr2 155925237 155925294 -94762560 + (CA)n Simple_repeat Simple_repeat 2 58 0 2075 128 17 0 chr2 155925752 155926048 -94761806 + AluSx SINE Alu 1 301 -11 181 146 42 0 chr2 155926338 155926386 -94761468 + (TA)n Simple_repeat Simple_repeat 2 51 0 544 322 23 0 chr2 155927906 155928077 -94759777 + MIR SINE MIR 75 249 -13 21 0 0 0 chr2 155928079 155928100 -94759754 + AT_rich Low_complexity Low_complexity 1 21 0 270 0 0 0 chr2 155928513 155928543 -94759311 + (T)n Simple_repeat Simple_repeat 1 30 0 1743 254 28 10 chr2 155929048 155929518 -94758336 - MLT1H1 LTR MaLR -1 554 32 23 54 0 0 chr2 155929532 155929569 -94758285 + AT_rich Low_complexity Low_complexity 1 37 0 35 54 0 0 chr2 155931542 155931598 -94756256 + AT_rich Low_complexity Low_complexity 1 56 0 2053 117 0 0 chr2 155931721 155932034 -94755820 - AluY SINE Alu 0 313 1 223 333 125 0 chr2 155932186 155932282 -94755572 - L2 LINE L2 -55 3217 3110 232 267 12 47 chr2 155932631 155932705 -94755149 - L2 LINE L2 0 3313 3241 1257 255 32 19 chr2 155932705 155933074 -94754780 + MLT1A2 LTR MaLR 1 374 0 232 267 12 47 chr2 155933074 155933085 -94754769 - L2 LINE L2 -72 3241 3231 1724 313 54 6 chr2 155933193 155933881 -94753973 - L2 LINE L2 -191 3122 2391 672 194 0 0 chr2 155934483 155934612 -94753242 - LTR33 LTR ERVL 0 521 393 1520 191 69 33 chr2 155934621 155934982 -94752872 + MLT1A2 LTR MaLR 1 374 0 1938 159 0 3 chr2 155935049 155935357 -94752497 - AluSx SINE Alu 0 312 6 454 307 26 20 chr2 155935484 155935637 -94752217 - LTR33 LTR ERVL -364 157 4 496 199 0 52 chr2 155935760 155935896 -94751958 - L1MC4 LINE L1 0 8042 7914 958 187 25 30 chr2 155935937 155936140 -94751714 - MER76 LTR ERV -486 202 1 473 141 51 0 chr2 155936288 155936366 -94751488 - MSTA LTR MaLR -346 82 1 283 333 69 39 chr2 155936584 155936992 -94750862 - HAL1b LINE L1 -733 615 196 1628 147 215 6 chr2 155937117 155937471 -94750383 - MSTA LTR MaLR 0 428 1 215 236 0 0 chr2 155937713 155937768 -94750086 + T-rich Low_complexity Low_complexity 1 55 0 22211 149 23 6 chr2 155938513 155942371 -94745483 + L1MA3 LINE L1 15 3938 -3627 6268 145 7 28 chr2 155942394 155943765 -94744089 + L1MA3 LINE L1 6382 7724 0 371 311 111 13 chr2 155943775 155944000 -94743854 + L1ME4a LINE L1 1545 1791 -4605 305 288 54 19 chr2 155944012 155944217 -94743637 + L1ME4a LINE L1 4367 4578 -1637 360 276 116 28 chr2 155944219 155944469 -94743385 + L1ME4a LINE L1 4642 4913 -1302 2079 133 10 0 chr2 155945341 155945650 -94742204 + AluSx SINE Alu 1 312 0 1634 247 8 61 chr2 155946248 155946726 -94741128 - MER82 DNA MER2_type 0 653 201 534 235 104 27 chr2 155947655 155947838 -94740016 + Charlie1a DNA MER1_type 1 197 -1258 3326 224 65 25 chr2 155947849 155948909 -94738945 + Charlie1a DNA MER1_type 352 1454 -1 223 302 57 19 chr2 155949121 155949227 -94738627 - MIR SINE MIR -56 206 97 2931 175 66 12 chr2 155949252 155949824 -94738030 + L1M1 LINE L1 5025 5627 -1938 897 143 12 19 chr2 155949827 155949988 -94737866 + L1PA15 LINE L1 6001 6160 -5 312 275 60 13 chr2 155950161 155950310 -94737544 - L1ME LINE L1 -274 5847 5692 212 204 45 0 chr2 155950574 155950618 -94737236 - MIR SINE MIR -30 232 187 732 368 9 3 chr2 155950681 155951007 -94736847 - MLT1I LTR MaLR 0 409 82 553 292 0 0 chr2 155951123 155951253 -94736601 - MIR SINE MIR -112 150 21 314 319 45 65 chr2 155952061 155952353 -94735501 + L1ME4a LINE L1 5352 5637 -2240 334 274 65 24 chr2 155952497 155952665 -94735189 + L1ME4a LINE L1 5819 5993 -197 572 282 115 24 chr2 155953491 155953700 -94734154 + MIR SINE MIR 8 235 -27 22 0 0 0 chr2 155954135 155954157 -94733697 + AT_rich Low_complexity Low_complexity 1 22 0 695 309 35 7 chr2 155954157 155954439 -94733415 - MER50 LTR ERV1 -130 604 315 237 160 0 40 chr2 155954997 155955047 -94732807 + GA-rich Low_complexity Low_complexity 4 51 0 6646 96 0 0 chr2 155957427 155958382 -94729472 - L1P LINE L1 -803 5343 4389 270 266 117 21 chr2 155960252 155960346 -94727508 + MIR SINE MIR 30 132 -130 528 255 21 14 chr2 155960490 155960631 -94727223 + FLAM_C SINE Alu 1 142 -1 276 126 74 21 chr2 155960801 155960896 -94726958 + (TA)n Simple_repeat Simple_repeat 1 100 0 193 149 46 11 chr2 155961088 155961175 -94726679 + (TA)n Simple_repeat Simple_repeat 1 90 0 2032 126 0 3 chr2 155963170 155963456 -94724398 - AluSq SINE Alu -26 287 3 4132 231 26 38 chr2 155963542 155964610 -94723244 - L1M4b LINE L1 -5792 1067 13 344 339 100 42 chr2 155965826 155966156 -94721698 + L3 LINE CR1 427 775 -802 234 0 0 0 chr2 155966781 155966807 -94721047 + (A)n Simple_repeat Simple_repeat 1 26 0 24 0 0 0 chr2 155967720 155967744 -94720110 + AT_rich Low_complexity Low_complexity 1 24 0 205 152 22 22 chr2 155968292 155968338 -94719516 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 184 236 57 157 chr2 155968434 155968574 -94719280 - MIR SINE MIR -63 145 20 25 65 0 0 chr2 155969589 155969635 -94718219 + AT_rich Low_complexity Low_complexity 1 46 0 651 225 197 25 chr2 155969957 155970201 -94717653 + Charlie4a DNA MER1_type 222 507 -1 273 146 0 0 chr2 155971690 155971738 -94716116 + (TAAG)n Simple_repeat Simple_repeat 3 50 0 350 333 67 40 chr2 155971866 155972016 -94715838 - L2 LINE L2 -9 3263 3110 259 270 138 72 chr2 155972594 155972746 -94715108 - MIR3 SINE MIR -17 191 30 10221 210 44 11 chr2 155973156 155974361 -94713493 - L1PB4 LINE L1 -1 6857 5694 1474 207 21 7 chr2 155974361 155974646 -94713208 + AluJb SINE Alu 1 289 -23 10221 210 44 11 chr2 155974646 155975859 -94711995 - L1PB4 LINE L1 -1164 5694 4523 225 0 0 0 chr2 155975859 155975884 -94711970 + (TTG)n Simple_repeat Simple_repeat 3 27 0 10221 210 44 11 chr2 155975884 155976935 -94710919 - L1PB4 LINE L1 -2335 4523 3270 1622 120 0 12 chr2 155976938 155977170 -94710684 + L1PBa LINE L1 1091 1321 -5542 1266 136 9 23 chr2 155977170 155977391 -94710463 + L1PB1 LINE L1 5934 6151 0 739 263 32 0 chr2 155977431 155977678 -94710176 - L1PB4 LINE L1 -3588 3260 3006 2184 248 48 19 chr2 155977679 155978591 -94709263 - L1PB4 LINE L1 -4463 2385 1347 228 404 18 22 chr2 155979050 155979278 -94708576 - L1PB4 LINE L1 -5867 982 756 396 361 68 60 chr2 155979468 155979983 -94707871 - L1PB4 LINE L1 -6321 528 10 1702 182 14 28 chr2 155980003 155980355 -94707499 + MER7A DNA MER2_type 2 346 0 760 228 67 5 chr2 155980415 155980608 -94707246 + MER3 DNA MER1_type 1 205 -4 1382 257 30 11 chr2 155980766 155981291 -94706563 - L1M4 LINE L1 -869 5277 4743 6170 206 77 22 chr2 155981440 155981546 -94706308 - L1MA7 LINE L1 0 6495 6396 1885 191 98 13 chr2 155981546 155981719 -94706135 + MSTB1 LTR MaLR 1 158 -274 221 0 35 0 chr2 155981719 155981748 -94706106 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1885 191 98 13 chr2 155981748 155981972 -94705882 + MSTB1 LTR MaLR 158 432 0 6170 206 77 22 chr2 155981972 155982018 -94705836 - L1MA7 LINE L1 -99 6396 6354 2259 112 10 0 chr2 155982018 155982323 -94705531 + AluSc SINE Alu 1 308 -1 6170 206 77 22 chr2 155982323 155984888 -94702966 - L1MA7 LINE L1 -141 6354 3630 180 0 0 0 chr2 155984888 155984908 -94702946 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2989 73 59 7 chr2 155984944 155984984 -94702870 - MLT2A1 LTR ERVL 0 444 408 531 0 0 0 chr2 155984984 155985043 -94702811 + (TA)n Simple_repeat Simple_repeat 2 60 0 * 636 26 0 0 chr2 155985042 155985120 -94702734 + (GA)n Simple_repeat Simple_repeat 2 79 0 2989 73 59 7 chr2 155985043 155985501 -94702353 - MLT2A1 LTR ERVL -36 408 1 42895 83 10 4 chr2 155985501 155989985 -94697869 - HERVL-A1-A1 LTR ERVL 0 5654 1198 233 73 0 24 chr2 155989985 155990026 -94697828 + (TTA)n Simple_repeat Simple_repeat 3 42 0 780 30 0 40 chr2 155990026 155990127 -94697727 - L1PA4 LINE L1 -18 6137 6041 2008 153 0 0 chr2 155990131 155990426 -94697428 - AluSx SINE Alu -17 295 1 42895 83 10 4 chr2 155990426 155991556 -94696298 - HERVL-A1-A1 LTR ERVL -4458 1196 1 3091 95 2 20 chr2 155991556 155992008 -94695846 - MLT2A1 LTR ERVL 0 444 1 2302 117 15 0 chr2 155992008 155992350 -94695504 - L1PB1 LINE L1 -30 6121 5775 1132 194 4 4 chr2 155992337 155992585 -94695269 + L1 LINE L1 4785 5032 -1114 * 4683 263 44 59 chr2 155992593 155994773 -94693081 - L1MA7 LINE L1 -3374 2976 1249 192 40 0 0 chr2 155994773 155994798 -94693056 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 4683 263 44 59 chr2 155994798 155996028 -94691826 - L1MA7 LINE L1 -5101 1249 2 1196 232 47 96 chr2 155996076 155997502 -94690352 - L1M4 LINE L1 -1538 4608 3311 648 250 115 55 chr2 155997516 155997879 -94689975 + L1ME2 LINE L1 1351 1923 -4684 233 294 50 8 chr2 155998095 155998214 -94689640 - Zaphod DNA AcHobo -8 4023 3900 492 236 89 31 chr2 155998215 155998406 -94689448 + L1ME2 LINE L1 5708 5909 -535 753 276 41 33 chr2 155998409 155998755 -94689099 + L1ME2 LINE L1 6106 6614 0 506 300 69 34 chr2 155999653 155999886 -94687968 + MIR SINE MIR 12 252 -10 281 310 62 9 chr2 156000030 156000143 -94687711 + L2 LINE L2 3191 3309 -4 2503 61 0 0 chr2 156001059 156001369 -94686485 + AluY SINE Alu 1 310 -1 234 253 0 63 chr2 156002389 156002484 -94685370 + L1MC4 LINE L1 6614 6702 -1340 221 282 12 12 chr2 156002509 156002594 -94685260 + (TA)n Simple_repeat Simple_repeat 1 85 0 26 50 0 0 chr2 156004315 156004355 -94683499 + AT_rich Low_complexity Low_complexity 1 40 0 790 336 39 11 chr2 156004507 156004888 -94682966 - ERVL LTR ERVL -1766 3998 3607 469 302 98 19 chr2 156004888 156005103 -94682751 - LTR33 LTR ERVL -289 232 1 23 0 0 0 chr2 156005138 156005161 -94682693 + AT_rich Low_complexity Low_complexity 1 23 0 2049 162 34 41 chr2 156006374 156006928 -94680926 - MLT2A2 LTR ERVL 0 554 1 371 217 67 0 chr2 156007082 156007202 -94680652 - L1ME4a LINE L1 -223 5898 5771 1784 137 23 52 chr2 156007309 156007616 -94680238 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr2 156007957 156007978 -94679876 + AT_rich Low_complexity Low_complexity 1 21 0 459 0 0 0 chr2 156008240 156008291 -94679563 + (TA)n Simple_repeat Simple_repeat 1 51 0 701 280 116 30 chr2 156008500 156008903 -94678951 - MLT1J2 LTR MaLR 0 450 6 422 263 17 33 chr2 156009188 156009402 -94678452 + L1MC4a LINE L1 5667 5822 -299 1893 135 24 0 chr2 156009415 156009712 -94678142 + AluSq SINE Alu 1 304 -9 207 173 0 0 chr2 156009864 156009916 -94677938 + CT-rich Low_complexity Low_complexity 2 53 0 23 33 0 0 chr2 156009936 156009966 -94677888 + AT_rich Low_complexity Low_complexity 1 30 0 732 222 0 36 chr2 156010386 156010553 -94677301 + FRAM SINE Alu 1 161 -5 23 33 0 0 chr2 156011320 156011350 -94676504 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 156011441 156011463 -94676391 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr2 156012008 156012033 -94675821 + (CA)n Simple_repeat Simple_repeat 2 26 0 1075 239 48 95 chr2 156012516 156013085 -94674769 + MER34 LTR ERV1 1 542 0 288 0 0 0 chr2 156014327 156014359 -94673495 + (CA)n Simple_repeat Simple_repeat 2 33 0 3975 155 44 6 chr2 156015537 156016261 -94671593 - Tigger3(Golem) DNA MER2_type 0 3029 2278 449 208 0 0 chr2 156016253 156016330 -94671524 - Tigger3(Golem) DNA MER2_type -2922 107 31 * 2308 113 3 0 chr2 156016973 156017283 -94670571 + AluSq SINE Alu 1 311 -2 189 213 0 0 chr2 156017526 156017573 -94670281 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 1801 168 23 49 chr2 156017726 156018072 -94669782 - MER1B DNA MER1_type 0 337 1 2422 89 0 13 chr2 156018281 156018595 -94669259 + AluSx SINE Alu 2 311 -1 24 67 0 0 chr2 156018796 156018841 -94669013 + AT_rich Low_complexity Low_complexity 1 45 0 32 43 0 0 chr2 156019549 156019595 -94668259 + AT_rich Low_complexity Low_complexity 1 46 0 324 130 0 0 chr2 156019756 156019825 -94668029 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 45 34 0 0 chr2 156019833 156019892 -94667962 + AT_rich Low_complexity Low_complexity 1 59 0 209 254 15 30 chr2 156020790 156020857 -94666997 + (TATG)n Simple_repeat Simple_repeat 4 69 0 285 146 0 0 chr2 156020857 156020905 -94666949 + (CA)n Simple_repeat Simple_repeat 2 49 0 919 188 37 41 chr2 156021148 156021221 -94666633 - L1MB2 LINE L1 -11 6160 6088 1059 268 18 67 chr2 156021221 156021788 -94666066 + MER34 LTR ERV1 1 539 -3 919 188 37 41 chr2 156021788 156021932 -94665922 - L1MB2 LINE L1 -83 6088 5944 211 211 21 0 chr2 156022013 156022108 -94665746 + (TA)n Simple_repeat Simple_repeat 2 98 0 42374 41 1 3 chr2 156022625 156028787 -94659067 - L1PA3 LINE L1 -2 6153 4 23 68 0 0 chr2 156028923 156028967 -94658887 + AT_rich Low_complexity Low_complexity 1 44 0 300 27 0 0 chr2 156029636 156029673 -94658181 + (TG)n Simple_repeat Simple_repeat 2 38 0 453 316 97 26 chr2 156031174 156031402 -94656452 - MIR SINE MIR -7 255 12 2217 278 69 111 chr2 156031661 156032093 -94655761 + L2 LINE L2 1189 1637 -1677 713 146 0 0 chr2 156032093 156032196 -94655658 - FLAM_A SINE Alu -18 124 22 2217 278 69 111 chr2 156032196 156033174 -94654680 + L2 LINE L2 1637 2638 -676 209 309 0 85 chr2 156033224 156033318 -94654536 + L2 LINE L2 2651 2736 -578 387 258 31 10 chr2 156033346 156033443 -94654411 + L2 LINE L2 2907 3005 -308 925 40 80 8 chr2 156033456 156033581 -94654273 + MER85 DNA T2_type 6 139 0 2076 114 7 10 chr2 156033808 156034140 -94653714 - AluSx SINE Alu 0 312 1 215 143 0 0 chr2 156034175 156034210 -94653644 + L2 LINE L2 3275 3309 -4 288 288 79 43 chr2 156034583 156034722 -94653132 - MIR SINE MIR -12 250 107 2297 74 7 3 chr2 156036489 156036785 -94651069 - AluY SINE Alu -13 298 2 216 318 0 15 chr2 156037553 156037619 -94650235 - MIR SINE MIR -58 150 86 2212 36 0 21 chr2 156037681 156037962 -94649892 - L1PA4 LINE L1 0 6155 5881 1852 30 0 0 chr2 156037962 156038198 -94649656 + L1P LINE L1 3151 3386 -2760 248 341 77 35 chr2 156038512 156038682 -94649172 + MIR3 SINE MIR 19 195 -13 22 88 0 0 chr2 156040254 156040311 -94647543 + AT_rich Low_complexity Low_complexity 1 57 0 1994 149 0 0 chr2 156040828 156041116 -94646738 + AluSx SINE Alu 1 288 -24 6052 40 0 0 chr2 156041116 156041840 -94646014 + L1PA5 LINE L1 5426 6149 -5 269 351 52 13 chr2 156041866 156042020 -94645834 - L2 LINE L2 -12 3301 3142 1933 207 8 16 chr2 156042880 156043190 -94644664 - MLT2D LTR ERVL -50 364 56 1905 158 19 84 chr2 156043190 156043258 -94644596 - MSTB1 LTR MaLR 0 432 361 2035 125 3 31 chr2 156043258 156043577 -94644277 + AluSg SINE Alu 1 310 0 1905 158 19 84 chr2 156043577 156043970 -94643884 - MSTB1 LTR MaLR -71 361 1 1933 207 8 16 chr2 156043970 156044026 -94643828 - MLT2D LTR ERVL -358 56 1 584 244 0 30 chr2 156044040 156044175 -94643679 + MER63A DNA MER1_type 80 210 0 685 348 13 40 chr2 156044189 156044488 -94643366 - LTR16A LTR ERVL -144 306 16 1632 141 4 4 chr2 156044839 156045087 -94642767 - MLT2B3 LTR ERVL -306 248 1 248 243 14 27 chr2 156045342 156045416 -94642438 + MIR SINE MIR 134 206 -56 339 305 20 37 chr2 156046125 156046342 -94641512 - MIR SINE MIR -50 212 5 321 26 0 0 chr2 156046674 156046712 -94641142 + (CA)n Simple_repeat Simple_repeat 1 38 0 22 0 0 0 chr2 156046847 156046869 -94640985 + AT_rich Low_complexity Low_complexity 1 22 0 2564 166 59 44 chr2 156046874 156047487 -94640367 - L1MA4 LINE L1 0 6300 5679 * 4118 151 34 65 chr2 156047479 156048774 -94639080 + L1MA4 LINE L1 4441 5671 -629 1031 237 151 19 chr2 156050275 156050705 -94637149 - Charlie4a DNA MER1_type -2 506 20 1945 70 85 0 chr2 156050946 156051257 -94636597 - AluY SINE Alu 0 333 1 24 32 0 0 chr2 156051263 156051294 -94636560 + AT_rich Low_complexity Low_complexity 1 31 0 486 252 0 49 chr2 156051619 156051762 -94636092 + MER5A DNA MER1_type 9 144 -45 2402 135 70 68 chr2 156051889 156052444 -94635410 + L1MC2 LINE L1 5776 6331 -13 228 233 0 0 chr2 156052446 156052489 -94635365 + (CATA)n Simple_repeat Simple_repeat 2 44 0 310 303 83 28 chr2 156052518 156052663 -94635191 + MER102b DNA MER1_type 164 316 -25 1742 18 18 9 chr2 156053058 156053278 -94634576 + L1PA4 LINE L1 5929 6150 -5 207 298 0 0 chr2 156053994 156054041 -94633813 + L2 LINE L2 3267 3313 0 180 0 0 0 chr2 156054530 156054550 -94633304 + (A)n Simple_repeat Simple_repeat 1 20 0 30 59 0 0 chr2 156054985 156055036 -94632818 + AT_rich Low_complexity Low_complexity 1 51 0 350 148 0 33 chr2 156055575 156055636 -94632218 + Tigger2 DNA MER2_type 2 60 -2658 682 265 7 7 chr2 156055700 156055851 -94632003 - MER8 DNA MER2_type -87 152 2 30 45 0 0 chr2 156056468 156056512 -94631342 + AT_rich Low_complexity Low_complexity 1 44 0 421 368 38 0 chr2 156056727 156056936 -94630918 - MIR SINE MIR -11 251 35 328 200 80 0 chr2 156057238 156057338 -94630516 - Charlie1a DNA MER1_type -41 1414 1307 246 126 81 11 chr2 156057343 156057430 -94630424 + (TA)n Simple_repeat Simple_repeat 1 93 0 416 213 21 11 chr2 156057466 156057560 -94630294 + AluJ/FLAM SINE Alu 1 95 -217 2883 209 43 26 chr2 156057563 156058137 -94629717 - L1M4c LINE L1 -2324 4058 3464 1852 154 3 13 chr2 156058137 156058442 -94629412 + AluJo SINE Alu 3 304 -8 2883 209 43 26 chr2 156058442 156058676 -94629178 - L1M4c LINE L1 -2918 3464 3236 338 190 0 0 chr2 156058676 156058734 -94629120 - FLAM_A SINE Alu -21 112 55 38 51 0 0 chr2 156058764 156058823 -94629031 + AT_rich Low_complexity Low_complexity 1 59 0 499 285 94 3 chr2 156058844 156059274 -94628580 - L1M4c LINE L1 -3724 2658 2183 662 219 22 4 chr2 156059274 156059493 -94628361 - MSTB1 LTR MaLR 0 432 116 2187 289 38 13 chr2 156059583 156060475 -94627379 - L1M4c LINE L1 -4512 1872 971 2030 237 18 43 chr2 156060488 156061146 -94626708 - Charlie1a DNA MER1_type -483 972 331 731 169 58 7 chr2 156061172 156061326 -94626528 - Charlie1a DNA MER1_type -1220 235 74 22 0 0 0 chr2 156061926 156061948 -94625906 + AT_rich Low_complexity Low_complexity 1 22 0 405 0 0 0 chr2 156062075 156062120 -94625734 + (CA)n Simple_repeat Simple_repeat 2 46 0 306 0 0 0 chr2 156062720 156062754 -94625100 + (TC)n Simple_repeat Simple_repeat 1 34 0 241 320 68 34 chr2 156063571 156063587 -94624267 + MIR SINE MIR 66 80 -182 468 71 129 0 chr2 156063587 156063657 -94624197 + MADE1 DNA Mariner 2 80 0 241 320 68 34 chr2 156063657 156063787 -94624067 + MIR SINE MIR 80 217 -45 1050 207 80 88 chr2 156063983 156064360 -94623494 + MLT1A2 LTR MaLR 1 374 0 1171 171 72 13 chr2 156065461 156065773 -94622081 - MER33 DNA MER1_type -28 296 1 218 205 0 0 chr2 156065945 156065984 -94621870 + (CA)n Simple_repeat Simple_repeat 1 39 0 3848 125 35 63 chr2 156066346 156067154 -94620700 - LTR1 LTR ERV1 0 785 1 28 48 0 0 chr2 156067884 156067926 -94619928 + AT_rich Low_complexity Low_complexity 1 42 0 792 260 8 70 chr2 156068458 156068700 -94619154 + MIR SINE MIR 36 262 0 489 303 39 39 chr2 156068729 156068907 -94618947 + MER5B DNA MER1_type 1 178 0 618 268 81 53 chr2 156069354 156069565 -94618289 - MIR SINE MIR -8 254 34 1668 91 0 4 chr2 156069565 156069795 -94618059 - L1PA8 LINE L1 -2 6170 5942 618 268 81 53 chr2 156069795 156069829 -94618025 - MIR SINE MIR -228 34 2 285 289 106 33 chr2 156070706 156070886 -94616968 + MLT1L LTR MaLR 186 378 -237 198 304 0 18 chr2 156071551 156071607 -94616247 - L3 LINE CR1 -72 1505 1451 22 35 0 0 chr2 156071754 156071783 -94616071 + AT_rich Low_complexity Low_complexity 1 29 0 708 98 0 0 chr2 156071849 156071951 -94615903 + AluSp/q SINE Alu 211 312 -1 465 307 65 27 chr2 156072189 156072759 -94615095 + L1ME LINE L1 4942 5535 -635 267 122 0 0 chr2 156073032 156073081 -94614773 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 566 112 10 10 chr2 156073092 156073190 -94614664 - L1MB4 LINE L1 0 6180 6083 273 230 59 66 chr2 156073373 156073525 -94614329 + HAL1b LINE L1 754 904 -444 24 32 0 0 chr2 156073925 156073956 -94613898 + AT_rich Low_complexity Low_complexity 1 31 0 1338 185 30 104 chr2 156075136 156075530 -94612324 - MLT1A1 LTR MaLR 0 365 1 268 329 40 33 chr2 156077519 156077671 -94610183 - MER5A DNA MER1_type 0 189 37 240 59 0 0 chr2 156078162 156078196 -94609658 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 576 336 170 33 chr2 156078288 156079122 -94608732 + L2 LINE L2 2356 3312 -1 239 330 129 21 chr2 156079229 156079462 -94608392 + L2 LINE L2 2626 2883 -431 225 154 0 0 chr2 156079715 156079754 -94608100 + (TGGA)n Simple_repeat Simple_repeat 3 41 0 634 224 82 0 chr2 156080052 156080222 -94607632 + MER33 DNA MER1_type 18 201 -123 1767 143 10 24 chr2 156080234 156080527 -94607327 - THE1B LTR MaLR 0 364 76 2117 84 3 17 chr2 156080696 156081006 -94606848 - AluY SINE Alu 0 306 1 2037 104 43 7 chr2 156081218 156081517 -94606337 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr2 156081767 156081789 -94606065 + AT_rich Low_complexity Low_complexity 1 22 0 334 188 286 9 chr2 156082160 156082272 -94605582 + MIR SINE MIR 110 252 -10 22 35 0 0 chr2 156083062 156083091 -94604763 + AT_rich Low_complexity Low_complexity 1 29 0 423 38 0 0 chr2 156083322 156083375 -94604479 + (TG)n Simple_repeat Simple_repeat 2 54 0 3856 150 36 1 chr2 156084432 156085157 -94602697 - L1MA7 LINE L1 -4 6287 5538 1370 338 126 20 chr2 156085169 156085818 -94602036 - L2 LINE L2 -379 2935 2356 1583 126 92 95 chr2 156085818 156086050 -94601804 - MER7A DNA MER2_type -2692 346 116 2356 99 0 3 chr2 156086050 156086364 -94601490 + AluSp SINE Alu 1 313 0 1583 126 92 95 chr2 156086364 156086480 -94601374 - MER7A DNA MER2_type -2922 116 1 1370 338 126 20 chr2 156086480 156086930 -94600924 - L2 LINE L2 -958 2356 1720 2235 96 3 0 chr2 156086957 156087249 -94600605 - AluSx SINE Alu -19 293 1 342 269 23 0 chr2 156087268 156087439 -94600415 + CT-rich Low_complexity Low_complexity 6 180 0 1362 169 90 0 chr2 156087818 156088085 -94599769 - AluJb SINE Alu -21 291 1 2162 131 35 11 chr2 156089173 156089539 -94598315 + THE1C LTR MaLR 1 375 0 762 298 83 34 chr2 156089561 156089970 -94597884 + MLT1K LTR MaLR 143 571 -17 218 370 73 21 chr2 156089998 156090190 -94597664 + L2 LINE L2 2659 2860 -454 48 53 0 0 chr2 156090662 156090738 -94597116 + AT_rich Low_complexity Low_complexity 1 76 0 22 35 0 0 chr2 156091410 156091439 -94596415 + AT_rich Low_complexity Low_complexity 1 29 0 1301 190 82 18 chr2 156091508 156091787 -94596067 - AluJo SINE Alu -5 307 11 356 300 87 43 chr2 156093124 156093354 -94594500 + L2 LINE L2 1712 1951 -1363 843 268 29 12 chr2 156093878 156094121 -94593733 - MIR SINE MIR 0 262 16 521 232 54 18 chr2 156094694 156094862 -94592992 - MER69A DNA AcHobo -3 174 1 21 36 0 0 chr2 156097946 156097974 -94589880 + AT_rich Low_complexity Low_complexity 1 28 0 1719 106 4 0 chr2 156098144 156098379 -94589475 - AluSp SINE Alu 0 313 78 422 278 88 10 chr2 156098837 156099031 -94588823 + L1ME2 LINE L1 5941 6149 -15 589 305 139 45 chr2 156099171 156099791 -94588063 + L1MC/D LINE L1 4670 5347 -799 754 11 21 0 chr2 156099807 156099902 -94587952 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 1153 264 19 19 chr2 156099937 156100255 -94587599 + L1MC/D LINE L1 5376 5693 -2115 3207 145 57 27 chr2 156100288 156100921 -94586933 - MER39B LTR ERV1 -1 652 1 576 191 79 7 chr2 156100975 156101127 -94586727 + L1MC4 LINE L1 7354 7516 -526 28 0 0 0 chr2 156101327 156101355 -94586499 + AT_rich Low_complexity Low_complexity 1 28 0 263 297 232 0 chr2 156101841 156101979 -94585875 + MER91A DNA MER1_type 10 179 -17 3042 48 0 20 chr2 156102035 156102433 -94585421 - L1PA4 LINE L1 0 6155 5766 3605 102 0 8 chr2 156102473 156102990 -94584864 + MER75 DNA T2_type 1 513 -1 2246 176 47 9 chr2 156103224 156103668 -94584186 - LOR1b LTR ERV1 0 461 1 32 0 0 0 chr2 156104055 156104087 -94583767 + AT_rich Low_complexity Low_complexity 1 32 0 228 371 159 18 chr2 156104405 156104688 -94583166 - L2 LINE L2 -343 2971 2649 22 80 0 0 chr2 156105346 156105396 -94582458 + AT_rich Low_complexity Low_complexity 1 50 0 12904 212 31 24 chr2 156106519 156107285 -94580569 - L1MA4 LINE L1 -357 7362 6603 186 43 0 0 chr2 156107285 156107308 -94580546 + (CCTG)n Simple_repeat Simple_repeat 1 23 0 264 30 0 0 chr2 156107308 156107341 -94580513 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 12904 212 31 24 chr2 156107341 156110011 -94577843 - L1MA4 LINE L1 -1116 6603 3954 231 36 0 0 chr2 156110011 156110039 -94577815 + (TG)n Simple_repeat Simple_repeat 2 29 0 12904 212 31 24 chr2 156110039 156111435 -94576419 - L1MA4 LINE L1 -3765 3954 2505 2016 114 10 14 chr2 156111435 156111732 -94576122 - AluSg1 SINE Alu -13 296 1 12904 212 31 24 chr2 156111732 156112193 -94575661 - L1MA4 LINE L1 -5214 2505 2049 505 361 53 32 chr2 156112621 156113128 -94574726 - L1MA4 LINE L1 -5763 1733 1216 199 315 63 0 chr2 156113245 156113356 -94574498 + L2 LINE L2 3122 3239 -74 246 264 28 85 chr2 156113887 156113993 -94573861 - MER5B DNA MER1_type -78 100 1 347 276 110 31 chr2 156114124 156114287 -94573567 + L1MC4a LINE L1 5374 5549 -2259 234 316 0 0 chr2 156114421 156114497 -94573357 + L1MC4a LINE L1 5727 5802 -360 897 291 75 42 chr2 156114520 156114974 -94572880 - MLT1H LTR MaLR -8 541 73 552 272 101 50 chr2 156114999 156115297 -94572557 - MER46C DNA MER2_type -24 314 2 23 68 0 0 chr2 156115415 156115459 -94572395 + AT_rich Low_complexity Low_complexity 1 44 0 338 257 43 29 chr2 156115883 156116023 -94571831 + L1MC4a LINE L1 5802 5943 -1865 2764 7 0 0 chr2 156116144 156116448 -94571406 - AluY SINE Alu -7 304 1 23 68 0 0 chr2 156116483 156116527 -94571327 + AT_rich Low_complexity Low_complexity 1 44 0 229 184 20 0 chr2 156116612 156116661 -94571193 - MER46C DNA MER2_type -277 61 12 1783 173 131 11 chr2 156116678 156117060 -94570794 + MSTA LTR MaLR 1 428 0 899 278 101 3 chr2 156117397 156117685 -94570169 + L1MC4a LINE L1 6549 6864 -944 29 70 0 0 chr2 156118375 156118432 -94569422 + AT_rich Low_complexity Low_complexity 1 57 0 730 275 55 64 chr2 156118482 156119845 -94568009 - L1MC4 LINE L1 -84 7958 6669 2165 125 0 0 chr2 156119914 156120211 -94567643 - AluSx SINE Alu -15 297 1 25 65 0 0 chr2 156120247 156120293 -94567561 + AT_rich Low_complexity Low_complexity 1 46 0 459 299 125 70 chr2 156120408 156120740 -94567114 - L1MC4a LINE L1 -1445 6363 5994 450 0 0 0 chr2 156120740 156120790 -94567064 + (TG)n Simple_repeat Simple_repeat 2 51 0 459 299 125 70 chr2 156120790 156120945 -94566909 - L1MC4a LINE L1 -1814 5994 5849 22 35 0 0 chr2 156121368 156121397 -94566457 + AT_rich Low_complexity Low_complexity 1 29 0 30 27 0 0 chr2 156122156 156122193 -94565661 + AT_rich Low_complexity Low_complexity 1 37 0 7229 76 3 5 chr2 156122269 156123225 -94564629 - HERVS71 LTR ERV1 -7483 1495 542 907 58 14 0 chr2 156123255 156123394 -94564460 + (GA)n Simple_repeat Simple_repeat 2 142 0 3074 100 9 13 chr2 156123394 156123844 -94564010 - HERVS71 LTR ERV1 -8527 451 4 434 87 43 0 chr2 156123847 156123916 -94563938 - LTR6B LTR ERV1 0 558 487 2288 172 23 11 chr2 156124147 156124588 -94563266 - HERVS71 LTR ERV1 -8529 449 4 4060 58 24 6 chr2 156124591 156125139 -94562715 - LTR6B LTR ERV1 0 558 1 632 255 44 11 chr2 156126044 156126247 -94561607 + L1MC3 LINE L1 1 176 -5869 2301 213 31 24 chr2 156126256 156126802 -94561052 + MER74A LTR ERVL 9 558 0 3404 225 54 21 chr2 156126805 156127953 -94559901 + L1MC3 LINE L1 201 1390 -4848 1598 220 39 12 chr2 156127957 156128646 -94559208 + L1MC3 LINE L1 3858 8203 0 234 320 20 20 chr2 156129319 156129419 -94558435 - L3 LINE CR1 -271 1306 1207 2561 91 103 7 chr2 156129477 156129886 -94557968 - LTR7 LTR ERV1 -2 448 1 2415 90 48 13 chr2 156129886 156130263 -94557591 - HERVH LTR ERV1 0 7713 7324 1251 134 22 22 chr2 156130263 156130312 -94557542 - HERVH LTR ERV1 -1894 5819 5771 2087 118 0 7 chr2 156130312 156130609 -94557245 + AluY SINE Alu 1 295 -16 1251 134 22 22 chr2 156130609 156130782 -94557072 - HERVH LTR ERV1 -1941 5772 5597 * 6322 119 4 2 chr2 156130779 156131712 -94556142 - HERVH LTR ERV1 -2564 5149 4215 1909 163 2 4 chr2 156131703 156132028 -94555826 - HERVH LTR ERV1 -3104 5522 3994 * 1548 150 0 4 chr2 156132022 156132268 -94555586 - HERVH LTR ERV1 -3977 3736 3492 * 843 161 13 0 chr2 156132258 156132407 -94555447 - HERVH LTR ERV1 -4423 3290 3140 * 10576 102 9 28 chr2 156132386 156134026 -94553828 - HERVH LTR ERV1 -4718 2995 1387 225 150 25 0 chr2 156134428 156134468 -94553386 - MLT2C1 LTR ERVL 0 397 357 1518 245 151 0 chr2 156134522 156134939 -94552915 - MLT2B1 LTR ERVL -40 480 1 252 289 39 51 chr2 156134939 156135095 -94552759 - MIR SINE MIR -8 254 101 787 203 254 67 chr2 156135096 156135411 -94552443 + MLT1A1 LTR MaLR 1 365 0 247 143 61 0 chr2 156135864 156135913 -94551941 - MER63 DNA MER1_type -878 52 1 194 420 0 0 chr2 156136149 156136218 -94551636 + L2 LINE L2 3186 3254 -18 501 291 159 0 chr2 156136466 156136617 -94551237 + MER5A DNA MER1_type 15 189 0 557 202 0 10 chr2 156137245 156137344 -94550510 + 5S rRNA rRNA 4 101 -20 453 274 81 0 chr2 156137355 156137479 -94550375 - MIR SINE MIR -120 142 9 680 225 87 0 chr2 156137479 156137652 -94550202 - MER5A DNA MER1_type 0 189 2 362 148 0 0 chr2 156137896 156137950 -94549904 + LTR17 LTR ERV1 1 54 -726 216 307 87 63 chr2 156137972 156138099 -94549755 + MIR3 SINE MIR 28 157 -51 3220 145 12 6 chr2 156139222 156139731 -94548123 - MER41E LTR ERV1 0 512 1 194 300 0 0 chr2 156139815 156139865 -94547989 - L2 LINE L2 -35 3237 3188 3880 146 41 22 chr2 156139927 156140641 -94547213 + LTR8A LTR ERV1 1 727 0 2311 97 3 0 chr2 156141411 156141711 -94546143 - AluSp SINE Alu -12 301 1 489 304 76 0 chr2 156142579 156142803 -94545051 - L1ME LINE L1 -337 5784 5544 1451 152 35 18 chr2 156143381 156143664 -94544190 + L1ME1 LINE L1 5874 6161 -5 21 0 0 0 chr2 156144208 156144229 -94543625 + AT_rich Low_complexity Low_complexity 1 21 0 1704 109 4 16 chr2 156144303 156144550 -94543304 - AluSc SINE Alu -15 294 51 257 246 27 45 chr2 156144755 156144865 -94542989 - L1MEc LINE L1 -2686 3529 3422 252 103 52 0 chr2 156144893 156144951 -94542903 + (TA)n Simple_repeat Simple_repeat 2 62 0 381 248 47 60 chr2 156144962 156145035 -94542819 - L1MEc LINE L1 -2823 3392 3320 1907 177 0 0 chr2 156145035 156145345 -94542509 - AluSx SINE Alu -2 310 1 381 248 47 60 chr2 156145345 156145570 -94542284 - L1MEc LINE L1 -2895 3320 3098 3377 157 24 12 chr2 156145575 156145884 -94541970 + L1PA16 LINE L1 5465 5786 -380 2232 110 0 0 chr2 156145884 156146174 -94541680 + AluSx SINE Alu 12 301 -11 3377 157 24 12 chr2 156146174 156146455 -94541399 + L1PA16 LINE L1 5786 6062 -104 413 228 139 5 chr2 156146542 156146744 -94541110 - L1MEc LINE L1 -3138 3077 2849 247 330 53 11 chr2 156146963 156147248 -94540606 - L1MEc LINE L1 -3646 2569 2273 1195 252 50 36 chr2 156147612 156147973 -94539881 + MLT1E3 LTR MaLR 60 425 -199 311 229 22 22 chr2 156148262 156148371 -94539483 - L1MEc LINE L1 -861 1715 1563 2128 115 0 55 chr2 156148743 156148936 -94538918 - AluSx SINE Alu 0 312 143 2242 68 7 3 chr2 156148936 156149229 -94538625 - AluY SINE Alu -17 294 1 2128 115 0 55 chr2 156149229 156149365 -94538489 - AluSx SINE Alu -169 143 1 257 238 113 38 chr2 156149479 156149559 -94538295 - MLT1D LTR MaLR -400 105 20 503 310 48 67 chr2 156150359 156150730 -94537124 - LTR16A1 LTR ERVL -4 453 90 818 276 90 48 chr2 156151097 156151518 -94536336 + MLT1J1 LTR MaLR 8 446 0 180 0 0 0 chr2 156152962 156152982 -94534872 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr2 156153166 156153187 -94534667 + AT_rich Low_complexity Low_complexity 1 21 0 24 100 0 0 chr2 156155962 156156042 -94531812 + AT_rich Low_complexity Low_complexity 1 80 0 23 0 0 0 chr2 156156975 156156998 -94530856 + AT_rich Low_complexity Low_complexity 1 23 0 2135 97 37 0 chr2 156157275 156157573 -94530281 - AluSq SINE Alu -1 312 4 1664 62 0 5 chr2 156157592 156157800 -94530054 - AluY SINE Alu 0 311 105 598 334 32 57 chr2 156159008 156159412 -94528442 - L2 LINE L2 -1 3312 2919 196 243 40 27 chr2 156160061 156160135 -94527719 - L2 LINE L2 -192 3080 3006 21 0 0 0 chr2 156160160 156160181 -94527673 + AT_rich Low_complexity Low_complexity 1 21 0 282 314 27 66 chr2 156160333 156160591 -94527263 - L2 LINE L2 -514 2800 2553 529 268 160 64 chr2 156161512 156161762 -94526092 - MLT1L LTR MaLR -340 275 2 24 0 0 0 chr2 156163134 156163158 -94524696 + AT_rich Low_complexity Low_complexity 1 24 0 1921 144 9 38 chr2 156163595 156163942 -94523912 + MER1B DNA MER1_type 1 337 0 259 281 22 79 chr2 156164109 156164248 -94523606 + MIR3 SINE MIR 69 199 -9 248 196 39 0 chr2 156165022 156165073 -94522781 - LTR67 LTR ERVL 0 557 505 2202 50 0 8 chr2 156166698 156166959 -94520895 + AluY SINE Alu 19 277 -34 2543 147 26 91 chr2 156167098 156167636 -94520218 - MLT2B1 LTR ERVL 0 520 18 1049 127 0 17 chr2 156167671 156167703 -94520151 + (TTCC)n Simple_repeat Simple_repeat 1 209 0 1049 127 0 17 chr2 156167703 156167884 -94519970 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 55 29 0 0 chr2 156168530 156168599 -94519255 + AT_rich Low_complexity Low_complexity 1 69 0 241 236 101 11 chr2 156168599 156168688 -94519166 + L1MC4 LINE L1 6609 6705 -1337 198 103 0 0 chr2 156168773 156168802 -94519052 + (TA)n Simple_repeat Simple_repeat 1 29 0 1153 264 31 54 chr2 156169768 156170155 -94517699 + LTR16C LTR ERVL 97 474 -17 194 281 70 0 chr2 156170181 156170238 -94517616 + L2 LINE L2 3212 3272 0 485 316 100 4 chr2 156171183 156171414 -94516440 + MIR SINE MIR 2 254 -8 289 303 84 42 chr2 156173098 156173217 -94514637 + L2 LINE L2 3148 3271 -1 1614 168 0 36 chr2 156173343 156173623 -94514231 + AluJb SINE Alu 1 270 -42 343 111 14 14 chr2 156173646 156173718 -94514136 + (TA)n Simple_repeat Simple_repeat 2 73 0 1389 208 62 4 chr2 156174186 156174460 -94513394 - AluJo SINE Alu -19 293 4 392 340 105 52 chr2 156174881 156175567 -94512287 + L2 LINE L2 2239 2960 -354 22 35 0 0 chr2 156175747 156175776 -94512078 + AT_rich Low_complexity Low_complexity 1 29 0 196 382 18 0 chr2 156175776 156175831 -94512023 + L2 LINE L2 3144 3199 -73 27 81 0 0 chr2 156177041 156177103 -94510751 + AT_rich Low_complexity Low_complexity 1 62 0 25 31 0 0 chr2 156177281 156177313 -94510541 + AT_rich Low_complexity Low_complexity 1 32 0 1081 216 43 43 chr2 156177741 156178042 -94509812 + AluJo SINE Alu 1 301 -1 309 259 49 57 chr2 156178459 156178606 -94509248 - L1MC/D LINE L1 -466 5655 5510 22 35 0 0 chr2 156179294 156179323 -94508531 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 156179936 156179957 -94507897 + AT_rich Low_complexity Low_complexity 1 21 0 430 289 123 9 chr2 156180575 156180786 -94507068 - L1ME LINE L1 -375 5746 5512 201 265 29 0 chr2 156180933 156181035 -94506819 + (TA)n Simple_repeat Simple_repeat 2 106 0 328 323 62 12 chr2 156181072 156181233 -94506621 - L1ME4a LINE L1 -159 5962 5794 373 162 171 43 chr2 156181334 156181451 -94506403 + MER89 LTR ERV1 426 557 -2 216 282 190 35 chr2 156182024 156182166 -94505688 + MIR SINE MIR 1 164 -98 670 196 15 88 chr2 156182260 156182464 -94505390 - MER5A DNA MER1_type 0 189 1 236 190 44 51 chr2 156183359 156183496 -94504358 + (TA)n Simple_repeat Simple_repeat 1 136 0 390 193 33 44 chr2 156183515 156183696 -94504158 + (TA)n Simple_repeat Simple_repeat 2 180 0 264 220 18 9 chr2 156183742 156183851 -94504003 + (TA)n Simple_repeat Simple_repeat 1 110 0 516 318 46 46 chr2 156185160 156185399 -94502455 + MIR SINE MIR 9 247 -15 183 80 0 0 chr2 156185400 156185425 -94502429 + (TTA)n Simple_repeat Simple_repeat 3 27 0 274 338 116 60 chr2 156186601 156187450 -94500404 - L2 LINE L2 -203 3069 2152 283 287 28 28 chr2 156188270 156188378 -94499476 - MIR SINE MIR -1 261 154 1826 133 80 0 chr2 156189419 156189720 -94498134 - MER7A DNA MER2_type 0 346 24 21 0 0 0 chr2 156190059 156190080 -94497774 + AT_rich Low_complexity Low_complexity 1 21 0 419 297 58 22 chr2 156192554 156192692 -94495162 + MIR SINE MIR 41 183 -79 453 254 100 21 chr2 156192769 156192976 -94494878 - L1ME4a LINE L1 -304 5817 5584 377 309 48 32 chr2 156193706 156193894 -94493960 - L1MEc LINE L1 -5707 689 499 1648 277 54 47 chr2 156193998 156194154 -94493700 + MLT1E LTR MaLR 13 166 -427 2322 90 3 0 chr2 156194154 156194464 -94493390 - AluY SINE Alu 0 311 1 1648 277 54 47 chr2 156194464 156194884 -94492970 + MLT1E LTR MaLR 166 593 0 491 316 36 45 chr2 156195221 156195853 -94492001 - L1MEd LINE L1 -4756 1554 889 1008 320 19 29 chr2 156196040 156196415 -94491439 + LTR16C LTR ERVL 111 481 -10 389 296 25 25 chr2 156196603 156196765 -94491089 - MER58B DNA MER1_type -8 333 172 2093 123 0 3 chr2 156196777 156197079 -94490775 - AluSq SINE Alu -12 301 1 557 273 256 14 chr2 156197654 156197943 -94489911 + L2 LINE L2 561 919 -2395 256 358 83 0 chr2 156197957 156198077 -94489777 + L2 LINE L2 2077 2206 -1108 362 220 11 44 chr2 156199269 156199360 -94488494 + MIR SINE MIR 174 261 -1 396 316 158 0 chr2 156199736 156199932 -94487922 - L3 LINE CR1 -64 1513 1287 184 383 158 5 chr2 156201165 156201387 -94486467 - MIR SINE MIR -4 258 3 759 83 0 0 chr2 156201794 156201915 -94485939 + (TC)n Simple_repeat Simple_repeat 1 121 0 396 0 0 0 chr2 156201914 156201958 -94485896 + (CA)n Simple_repeat Simple_repeat 1 44 0 * 1944 140 3 3 chr2 156203046 156203339 -94484515 - AluSx SINE Alu -19 293 1 26 0 0 0 chr2 156203348 156203374 -94484480 + AT_rich Low_complexity Low_complexity 1 26 0 343 313 93 22 chr2 156203612 156203794 -94484060 - MIR SINE MIR -55 207 13 1092 123 0 12 chr2 156204924 156205094 -94482760 - AluSg/x SINE Alu 0 312 145 2424 185 33 26 chr2 156205113 156205685 -94482169 - L1MA8 LINE L1 -5 6286 5711 199 89 0 44 chr2 156208889 156208934 -94478920 + (TA)n Simple_repeat Simple_repeat 2 44 0 1062 297 61 16 chr2 156209107 156209744 -94478110 + L1MEc LINE L1 1008 1673 -4723 333 0 0 0 chr2 156260567 156260604 -94427250 + (A)n Simple_repeat Simple_repeat 1 37 0 261 257 40 0 chr2 156261498 156261599 -94426255 + GA-rich Low_complexity Low_complexity 1 105 0 241 24 48 24 chr2 156261647 156261689 -94426165 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 517 290 87 29 chr2 156261744 156261951 -94425903 - MIR SINE MIR -28 234 16 547 301 25 10 chr2 156262191 156262390 -94425464 + MIR SINE MIR 23 224 -38 316 301 142 18 chr2 156262594 156262813 -94425041 - MIR SINE MIR -16 246 1 224 173 19 19 chr2 156262866 156262918 -94424936 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 361 335 24 63 chr2 156263109 156263315 -94424539 + MIR SINE MIR 9 206 -56 2223 301 105 22 chr2 156263932 156265364 -94422490 - L1MDa LINE L1 -2212 4328 2777 1711 221 153 14 chr2 156265372 156265889 -94421965 - L1MDa LINE L1 -5189 1351 763 2054 171 25 6 chr2 156265892 156266254 -94421600 + Tigger2 DNA MER2_type 2350 2718 0 782 197 141 9 chr2 156266254 156266467 -94421387 + MER2 DNA MER2_type 105 345 0 321 118 0 0 chr2 156266469 156266481 -94421373 + (TA)n Simple_repeat Simple_repeat 1 63 0 321 118 0 0 chr2 156266481 156266532 -94421322 + (TA)n Simple_repeat Simple_repeat 1 51 0 1585 196 28 0 chr2 156269452 156269738 -94418116 + AluJo SINE Alu 1 294 -18 213 318 117 28 chr2 156269891 156270070 -94417784 - MIR SINE MIR 0 262 68 22 35 0 0 chr2 156270327 156270356 -94417498 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 156270555 156270576 -94417278 + AT_rich Low_complexity Low_complexity 1 21 0 712 181 0 18 chr2 156270708 156270901 -94416953 + AluJ SINE Alu 75 303 -9 28 48 0 0 chr2 156270931 156270973 -94416881 + AT_rich Low_complexity Low_complexity 1 42 0 304 281 39 55 chr2 156271500 156271628 -94416226 + MIR SINE MIR 65 190 -72 26 0 0 0 chr2 156274101 156274127 -94413727 + AT_rich Low_complexity Low_complexity 1 26 0 333 185 0 0 chr2 156274231 156274296 -94413558 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 324 281 26 72 chr2 156275887 156276040 -94411814 - L2 LINE L2 0 3313 3168 2304 92 0 13 chr2 156276084 156276400 -94411454 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 156277054 156277075 -94410779 + AT_rich Low_complexity Low_complexity 1 21 0 845 272 26 0 chr2 156277429 156277624 -94410230 - MER90 LTR ERV1 0 614 415 327 317 57 34 chr2 156277624 156277886 -94409968 - L1M4 LINE L1 -1965 4181 3914 574 298 84 81 chr2 156278173 156278804 -94409050 + L1M4 LINE L1 4067 4699 -1447 2328 284 127 30 chr2 156279021 156279580 -94408274 - L1M4 LINE L1 -1460 4686 4182 2282 93 0 19 chr2 156279580 156279890 -94407964 - AluSc SINE Alu -5 304 1 2328 284 127 30 chr2 156279890 156281527 -94406327 - L1M4 LINE L1 -1964 4182 2278 2197 77 0 33 chr2 156281715 156282014 -94405840 + AluY SINE Alu 7 295 -16 29 0 0 0 chr2 156282273 156282302 -94405552 + AT_rich Low_complexity Low_complexity 1 29 0 3641 55 0 8 chr2 156282280 156282751 -94405103 - L1PA8 LINE L1 0 6172 5706 24 32 0 0 chr2 156282941 156282972 -94404882 + AT_rich Low_complexity Low_complexity 1 31 0 251 317 79 11 chr2 156283249 156283361 -94404493 + MIR SINE MIR 49 171 -37 479 233 156 34 chr2 156283402 156283598 -94404256 - MLT1E2 LTR MaLR -319 307 118 1025 97 0 0 chr2 156284654 156284799 -94403055 + L1PB1 LINE L1 6007 6151 0 555 242 73 46 chr2 156284818 156285145 -94402709 - L1M4 LINE L1 -3040 3106 2771 2051 169 21 8 chr2 156285299 156285684 -94402170 - MLT1B LTR MaLR 0 390 1 305 294 47 68 chr2 156285897 156286132 -94401722 + L1 LINE L1 4308 4537 -1609 236 322 41 34 chr2 156286307 156286453 -94401401 + MIR SINE MIR 72 218 -44 518 254 103 10 chr2 156287482 156287687 -94400167 - L1MD1 LINE L1 0 7805 6085 374 148 62 0 chr2 156287681 156287762 -94400092 - L1MC3 LINE L1 0 7785 7700 * 1285 262 88 63 chr2 156287745 156287911 -94399943 - L1M4 LINE L1 -2160 3986 3826 2210 94 0 16 chr2 156287911 156288218 -94399636 - AluSq SINE Alu -11 302 1 1285 262 88 63 chr2 156288218 156288983 -94398871 - L1M4 LINE L1 -2320 3826 3032 230 284 68 11 chr2 156289477 156289565 -94398289 + MIR SINE MIR 63 155 -107 1023 60 0 0 chr2 156290143 156290276 -94397578 - L1PA7 LINE L1 -129 6025 5893 946 59 0 0 chr2 156290275 156290428 -94397426 + L1PA7 LINE L1 6013 6165 0 * 25 83 0 0 chr2 156290678 156290738 -94397116 + AT_rich Low_complexity Low_complexity 1 60 0 2039 202 0 3 chr2 156291269 156291635 -94396219 - MLT1A1 LTR MaLR 0 365 1 1791 197 6 6 chr2 156291975 156292305 -94395549 + MER2 DNA MER2_type 1 330 -15 229 208 0 0 chr2 156293202 156293255 -94394599 + (TA)n Simple_repeat Simple_repeat 1 53 0 468 276 58 29 chr2 156293697 156293940 -94393914 - L1ME LINE L1 -575 5587 5338 653 289 17 0 chr2 156294188 156294368 -94393486 - AluJb SINE Alu -1 311 129 2429 74 0 3 chr2 156294370 156294680 -94393174 - AluY SINE Alu -2 309 1 22 0 0 0 chr2 156294683 156294705 -94393149 + AT_rich Low_complexity Low_complexity 1 22 0 315 182 8 0 chr2 156294710 156294786 -94393068 - FLAM_A SINE Alu 0 133 81 296 293 9 9 chr2 156295092 156295208 -94392646 - L1ME LINE L1 -1497 4649 4534 1777 211 188 2 chr2 156295453 156295879 -94391975 + MLT1D LTR MaLR 1 505 0 217 238 0 0 chr2 156296639 156296681 -94391173 + MIR SINE MIR 103 144 -64 218 280 69 43 chr2 156297324 156297470 -94390384 + MIR SINE MIR 2 148 -62 1346 130 27 14 chr2 156298248 156298471 -94389383 + MER30 DNA MER1_type 5 230 0 243 381 10 0 chr2 156298476 156298573 -94389281 + L2 LINE L2 2871 2968 -304 843 166 60 74 chr2 156298653 156298870 -94388984 - MER20 DNA MER1_type -5 214 1 579 284 33 85 chr2 156298885 156299191 -94388663 + L2 LINE L2 3022 3311 -2 2096 247 60 11 chr2 156299317 156299871 -94387983 + MER119 DNA MER1_type 3 583 0 622 123 9 0 chr2 156299991 156300097 -94387757 - L1P4 LINE L1 -714 5451 5345 296 325 171 29 chr2 156301118 156301358 -94386496 + L2 LINE L2 2475 2748 -566 1990 169 42 44 chr2 156301962 156302393 -94385461 - MSTB1 LTR MaLR 0 432 3 331 221 44 0 chr2 156302444 156302512 -94385342 - MER69 DNA AcHobo -106 71 1 289 211 0 0 chr2 156303419 156303471 -94384383 + MIR SINE MIR 63 114 -148 23 33 0 0 chr2 156303496 156303526 -94384328 + AT_rich Low_complexity Low_complexity 1 30 0 5052 185 34 18 chr2 156303528 156304541 -94383313 - L1MC2 LINE L1 -9 6335 5306 24 0 0 0 chr2 156304555 156304579 -94383275 + AT_rich Low_complexity Low_complexity 1 24 0 2027 93 14 0 chr2 156304604 156304907 -94382947 + AluY SINE Alu 1 307 0 195 223 27 0 chr2 156305573 156305685 -94382169 + (TA)n Simple_repeat Simple_repeat 2 116 0 2077 96 11 0 chr2 156306112 156306392 -94381462 + AluSx SINE Alu 30 312 0 23 68 0 0 chr2 156307600 156307644 -94380210 + AT_rich Low_complexity Low_complexity 1 44 0 22 56 0 0 chr2 156308128 156308164 -94379690 + AT_rich Low_complexity Low_complexity 1 36 0 644 320 49 12 chr2 156308479 156308726 -94379128 + MIR SINE MIR 7 262 0 23 68 0 0 chr2 156308813 156308857 -94378997 + AT_rich Low_complexity Low_complexity 1 44 0 37538 86 11 10 chr2 156309105 156315237 -94372617 - L1PA6 LINE L1 -4 6150 11 2065 125 3 0 chr2 156315286 156315573 -94372281 - AluSx SINE Alu -24 288 1 2206 112 3 0 chr2 156315843 156316138 -94371716 + AluSx SINE Alu 1 296 -16 247 352 68 42 chr2 156316540 156316776 -94371078 - MIR SINE MIR -1 261 20 203 61 30 0 chr2 156317623 156317656 -94370198 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2040 123 3 0 chr2 156317668 156317953 -94369901 - AluSg SINE Alu -24 286 1 14422 50 2 1 chr2 156318286 156320885 -94366969 - L1PA5 LINE L1 -1 6153 3554 2189 114 3 3 chr2 156321980 156322287 -94365567 - AluSx SINE Alu -1 311 5 279 341 49 12 chr2 156322387 156322551 -94365303 + L1 LINE L1 4900 5069 -1077 23 33 0 0 chr2 156325535 156325565 -94362289 + AT_rich Low_complexity Low_complexity 1 30 0 29 47 0 0 chr2 156325618 156325661 -94362193 + AT_rich Low_complexity Low_complexity 1 43 0 1905 158 0 13 chr2 156326001 156326317 -94361537 - AluJb SINE Alu 0 312 1 2238 94 0 0 chr2 156327103 156327402 -94360452 - AluSq SINE Alu -14 299 1 234 91 0 0 chr2 156328129 156328162 -94359692 + (CA)n Simple_repeat Simple_repeat 1 33 0 24 53 0 0 chr2 156329756 156329794 -94358060 + AT_rich Low_complexity Low_complexity 1 38 0 297 283 142 0 chr2 156330043 156330156 -94357698 + MIR SINE MIR 120 248 -14 533 100 54 0 chr2 156330526 156330656 -94357198 + (TA)n Simple_repeat Simple_repeat 2 138 0 2050 106 7 3 chr2 156330657 156330940 -94356914 - AluSc SINE Alu -25 284 1 202 215 15 31 chr2 156331796 156331861 -94355993 + (TA)n Simple_repeat Simple_repeat 2 65 0 1301 213 92 59 chr2 156331937 156332426 -94355428 + MLT1D LTR MaLR 1 505 0 908 249 22 26 chr2 156333289 156333518 -94354336 + MIR SINE MIR 35 262 0 180 152 0 0 chr2 156333616 156333649 -94354205 + (CA)n Simple_repeat Simple_repeat 2 34 0 2165 92 3 3 chr2 156333995 156334288 -94353566 + AluSq SINE Alu 1 293 -20 774 299 37 0 chr2 156334644 156334858 -94352996 - MIR SINE MIR -27 235 14 22 80 0 0 chr2 156335271 156335321 -94352533 + AT_rich Low_complexity Low_complexity 1 50 0 2200 102 3 20 chr2 156335478 156335781 -94352073 - AluSg SINE Alu -12 298 1 664 281 47 51 chr2 156335829 156336085 -94351769 + MIR SINE MIR 7 261 -1 1949 168 12 63 chr2 156336294 156336494 -94351360 - MLT1B LTR MaLR 0 390 220 1057 239 118 14 chr2 156336494 156336850 -94351004 + MSTD LTR MaLR 1 393 -3 1949 168 12 63 chr2 156336850 156337060 -94350794 - MLT1B LTR MaLR -170 220 1 337 284 26 71 chr2 156340877 156341032 -94346822 - L2 LINE L2 0 3313 3166 2093 130 0 13 chr2 156341074 156341390 -94346464 + AluSx SINE Alu 1 312 0 604 207 50 0 chr2 156341638 156341759 -94346095 - MER94 DNA DNA 0 134 8 180 0 0 0 chr2 156343283 156343303 -94344551 + (TTG)n Simple_repeat Simple_repeat 2 21 0 208 330 104 9 chr2 156343605 156343720 -94344134 - MIR SINE MIR -31 231 106 181 261 0 22 chr2 156343759 156343805 -94344049 - L3 LINE CR1 -254 1323 1279 1775 166 13 25 chr2 156344307 156344621 -94343233 + AluJo SINE Alu 1 310 -2 184 179 45 15 chr2 156344807 156344941 -94342913 + (TA)n Simple_repeat Simple_repeat 2 139 0 203 271 0 0 chr2 156344966 156345025 -94342829 + T-rich Low_complexity Low_complexity 1 59 0 201 94 0 0 chr2 156345849 156345881 -94341973 + (CA)n Simple_repeat Simple_repeat 1 32 0 267 256 47 0 chr2 156345927 156346013 -94341841 - L1MC4 LINE L1 -1339 6703 6614 2797 269 107 52 chr2 156346022 156347811 -94340043 - HAL1 LINE L1 -13 2494 609 1799 228 35 35 chr2 156348154 156348646 -94339208 - MLT1D LTR MaLR -13 492 1 363 44 0 0 chr2 156348900 156348945 -94338909 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 2902 65 8 105 chr2 156350704 156351200 -94336654 + LTR7 LTR ERV1 1 448 -2 20204 98 11 14 chr2 156351202 156354202 -94333652 + HERVH LTR ERV1 1 2992 -4721 862 149 20 0 chr2 156354188 156354336 -94333518 + HERVH LTR ERV1 3140 3290 -4423 * 3315 111 2 6 chr2 156354326 156354830 -94333024 + HERVH LTR ERV1 3492 3993 -3720 4232 148 3 1 chr2 156354832 156355493 -94332361 + HERVH LTR ERV1 4488 5149 -2564 * 16219 53 13 3 chr2 156355490 156357587 -94330267 + HERVH LTR ERV1 5597 7713 0 3324 65 5 7 chr2 156357587 156358036 -94329818 + LTR7 LTR ERV1 1 448 -2 1814 145 31 3 chr2 156358705 156358995 -94328859 + AluSq SINE Alu 4 301 -12 626 249 78 54 chr2 156361030 156361235 -94326619 - MLT1E LTR MaLR -354 239 30 28 71 0 0 chr2 156361707 156361763 -94326091 + AT_rich Low_complexity Low_complexity 1 56 0 930 188 81 0 chr2 156361952 156362138 -94325716 - MER2 DNA MER2_type -135 210 10 420 284 90 5 chr2 156362161 156362362 -94325492 + L1ME3A LINE L1 5666 5883 -287 4654 199 14 4 chr2 156363970 156365567 -94322287 - L1MA4 LINE L1 -369 6113 4502 2077 155 19 8 chr2 156365568 156365929 -94321925 - L1PA15 LINE L1 -8 6157 5793 267 293 0 13 chr2 156366050 156366125 -94321729 + CT-rich Low_complexity Low_complexity 5 78 0 5512 128 30 2 chr2 156366126 156367280 -94320574 - L1PA15 LINE L1 -7 6158 4987 7127 256 65 21 chr2 156367286 156371019 -94316835 - L1PA13 LINE L1 -2880 3917 1 2144 220 55 12 chr2 156371041 156371600 -94316254 - L1MA4 LINE L1 -1767 4561 3979 4537 213 26 13 chr2 156371700 156372909 -94314945 - L1MA4 LINE L1 -2624 3704 2480 4077 210 12 21 chr2 156372884 156373694 -94314160 - L1MA4 LINE L1 -4524 804 2 * 211 376 21 0 chr2 156373723 156373816 -94314038 - MIR SINE MIR -70 192 98 471 312 105 71 chr2 156373900 156374592 -94313262 - L2 LINE L2 -80 3233 2504 345 100 0 0 chr2 156374802 156374852 -94313002 + (A)n Simple_repeat Simple_repeat 1 50 0 48 0 0 0 chr2 156375090 156375138 -94312716 + AT_rich Low_complexity Low_complexity 1 48 0 395 303 56 42 chr2 156376654 156377011 -94310843 - L1MC/D LINE L1 -2143 5665 5304 702 302 183 8 chr2 156377185 156377556 -94310298 - LTR16A LTR ERVL -5 445 10 486 244 125 30 chr2 156379882 156380050 -94307804 - MIR SINE MIR -43 219 36 267 362 0 17 chr2 156380346 156380462 -94307392 - L2 LINE L2 0 3313 3200 700 247 73 104 chr2 156380563 156381013 -94306841 + LTR40b LTR ERVL 1 436 -29 193 250 39 0 chr2 156383316 156383368 -94304486 + L2 LINE L2 3259 3312 -1 242 323 83 0 chr2 156383442 156383538 -94304316 - L2 LINE L2 -36 3236 3133 22 0 0 0 chr2 156386062 156386084 -94301770 + AT_rich Low_complexity Low_complexity 1 22 0 254 276 0 20 chr2 156386085 156386183 -94301671 + (TA)n Simple_repeat Simple_repeat 2 97 0 1040 174 26 0 chr2 156386335 156386525 -94301329 - L1MB1 LINE L1 -3 6165 5971 249 86 0 0 chr2 156386527 156386562 -94301292 + L1M3 LINE L1 5705 5739 -429 211 192 27 41 chr2 156386574 156386647 -94301207 + (CA)n Simple_repeat Simple_repeat 2 73 0 321 26 0 0 chr2 156386690 156386728 -94301126 + (CA)n Simple_repeat Simple_repeat 1 38 0 513 260 18 57 chr2 156386829 156387110 -94300744 + L1M4 LINE L1 4549 4818 -1328 942 205 23 5 chr2 156387193 156387413 -94300441 - L1MB1 LINE L1 -264 5904 5676 274 109 40 59 chr2 156387414 156387515 -94300339 + (TG)n Simple_repeat Simple_repeat 2 100 0 1697 137 53 27 chr2 156387626 156387925 -94299929 - AluSg SINE Alu -3 307 1 435 326 107 15 chr2 156388276 156388546 -94299308 - L2 LINE L2 -14 3299 3005 415 275 123 59 chr2 156389561 156389797 -94298057 + MIR SINE MIR 4 254 -8 1656 172 6 38 chr2 156389982 156390426 -94297428 - AluJb SINE Alu 0 436 3 22 35 0 0 chr2 156391895 156391924 -94295930 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr2 156391966 156391996 -94295858 + AT_rich Low_complexity Low_complexity 1 30 0 200 336 65 28 chr2 156392639 156392746 -94295108 + MIR SINE MIR 145 255 -7 300 324 81 14 chr2 156393152 156393300 -94294554 - MIR SINE MIR -88 174 17 24 0 0 0 chr2 156394123 156394147 -94293707 + AT_rich Low_complexity Low_complexity 1 24 0 1210 233 17 31 chr2 156394620 156394907 -94292947 - LTR40a LTR ERVL -2 517 235 523 195 8 51 chr2 156395193 156395311 -94292543 - HERVL68 LTR ERVL -140 5390 5278 271 339 58 36 chr2 156395295 156395569 -94292285 - MER89-int LTR ERV1 -316 6485 6206 * 374 303 70 52 chr2 156395817 156396088 -94291766 - HERVL68 LTR ERVL -328 2709 2434 2991 283 20 37 chr2 156396356 156396584 -94291270 - HERVL68 LTR ERVL -866 4664 4434 2091 128 3 3 chr2 156396584 156396881 -94290973 - AluSx SINE Alu -14 298 2 2991 283 20 37 chr2 156396881 156397600 -94290254 - HERVL68 LTR ERVL -1096 4434 3733 180 176 0 0 chr2 156398390 156398424 -94289430 + (TA)n Simple_repeat Simple_repeat 1 34 0 213 39 0 0 chr2 156398564 156398590 -94289264 + (TC)n Simple_repeat Simple_repeat 2 27 0 1853 152 3 3 chr2 156398596 156398885 -94288969 - AluJb SINE Alu -23 289 1 185 256 0 0 chr2 156399586 156399625 -94288229 - MIR SINE MIR -11 251 213 1463 93 0 34 chr2 156399888 156400093 -94287761 - AluSg SINE Alu -112 198 1 275 273 30 20 chr2 156400698 156400797 -94287057 + L1M4 LINE L1 4513 4612 -1534 22 56 0 0 chr2 156400905 156400941 -94286913 + AT_rich Low_complexity Low_complexity 1 36 0 389 304 29 68 chr2 156401394 156401601 -94286253 - MIR SINE MIR 0 262 64 2090 106 3 0 chr2 156402856 156403173 -94284681 + AluSq SINE Alu 1 318 0 546 347 121 19 chr2 156404197 156404569 -94283285 + L2 LINE L2 2804 3213 -100 195 268 63 47 chr2 156406196 156406323 -94281531 - L3b LINE CR1 -147 1436 1308 402 256 108 23 chr2 156406971 156407100 -94280754 - MIR SINE MIR -14 248 109 278 31 0 0 chr2 156407419 156407451 -94280403 + (T)n Simple_repeat Simple_repeat 1 32 0 606 213 25 0 chr2 156407534 156407656 -94280198 + FLAM_A SINE Alu 16 140 -2 251 266 75 0 chr2 156407786 156407880 -94279974 - L1MC5 LINE L1 -30 7931 7831 2122 104 0 0 chr2 156408015 156408327 -94279527 - AluSc SINE Alu 0 314 3 997 208 62 71 chr2 156408488 156408997 -94278857 - L1MD3 LINE L1 -30 7965 7380 576 127 7 48 chr2 156409084 156409200 -94278654 - MER101 LTR ERV1 0 474 383 228 119 134 75 chr2 156409145 156409212 -94278642 + MER101 LTR ERV1 404 474 0 * 472 208 0 82 chr2 156409212 156409371 -94278483 - L1MC5 LINE L1 -736 7225 7080 554 286 53 60 chr2 156409511 156409812 -94278042 - L1MC4 LINE L1 -974 7068 6770 1967 151 3 0 chr2 156410136 156410441 -94277413 - AluSx SINE Alu -6 306 1 28 71 0 0 chr2 156411206 156411262 -94276592 + AT_rich Low_complexity Low_complexity 1 56 0 220 267 0 17 chr2 156411797 156411857 -94275997 + GA-rich Low_complexity Low_complexity 1 59 0 298 294 25 89 chr2 156412195 156412430 -94275424 + L2 LINE L2 3094 3313 0 1973 148 0 3 chr2 156412564 156412862 -94274992 + AluJb SINE Alu 12 308 -4 24 0 0 0 chr2 156412892 156412916 -94274938 + AT_rich Low_complexity Low_complexity 1 24 0 238 356 89 72 chr2 156413580 156413940 -94273914 + L2 LINE L2 2891 3256 -16 1740 170 0 10 chr2 156414042 156414376 -94273478 - AluJb SINE Alu 0 334 4 26 0 0 0 chr2 156414376 156414402 -94273452 + AT_rich Low_complexity Low_complexity 1 26 0 1775 141 0 0 chr2 156417632 156417901 -94269953 - L1PA15 LINE L1 -12 6153 5885 359 333 27 27 chr2 156468640 156468823 -94219031 + MER5A DNA MER1_type 7 189 0 1343 186 15 40 chr2 156469239 156469567 -94218287 - MER33 DNA MER1_type -4 320 1 277 242 31 94 chr2 156469593 156469721 -94218133 + MIR SINE MIR 49 168 -94 223 361 6 57 chr2 156471733 156471891 -94215963 - L2 LINE L2 -180 3092 2943 1642 244 28 3 chr2 156472097 156472453 -94215401 + MLT1A1 LTR MaLR 1 365 0 481 375 46 21 chr2 156472453 156472736 -94215118 - L2 LINE L2 -602 2712 2423 246 59 0 0 chr2 156473891 156473916 -94213938 + (T)n Simple_repeat Simple_repeat 1 28 -6 2132 119 0 0 chr2 156473916 156474211 -94213643 + AluSg SINE Alu 1 295 -15 246 59 0 0 chr2 156474211 156474219 -94213635 + (T)n Simple_repeat Simple_repeat 27 34 0 21 0 0 0 chr2 156475120 156475141 -94212713 + AT_rich Low_complexity Low_complexity 1 21 0 570 131 0 0 chr2 156475421 156475505 -94212349 + AluS SINE Alu 223 306 -3 408 71 0 0 chr2 156475505 156475561 -94212293 + (TA)n Simple_repeat Simple_repeat 2 57 0 914 284 94 43 chr2 156476268 156476662 -94211192 - LTR33 LTR ERVL -63 458 45 371 294 202 0 chr2 156477050 156477268 -94210586 - MIR SINE MIR 0 262 1 739 301 64 64 chr2 156477272 156477647 -94210207 - L2 LINE L2 -12 3301 2927 290 333 161 6 chr2 156477720 156477888 -94209966 - MIR SINE MIR -32 230 37 362 294 158 52 chr2 156477904 156478598 -94209256 - HAL1 LINE L1 -1274 1233 466 363 222 28 0 chr2 156478659 156478731 -94209123 - L2 LINE L2 -9 3304 3231 23 33 0 0 chr2 156478852 156478882 -94208972 + AT_rich Low_complexity Low_complexity 1 30 0 302 222 6 33 chr2 156482373 156482553 -94205301 + (TA)n Simple_repeat Simple_repeat 1 175 0 190 133 22 22 chr2 156482607 156482652 -94205202 + (TA)n Simple_repeat Simple_repeat 1 45 0 464 314 41 33 chr2 156483111 156483353 -94204501 + L1MEc LINE L1 43 286 -6110 2125 295 81 26 chr2 156483369 156484472 -94203382 + L1MEc LINE L1 336 1498 -4898 1056 174 16 45 chr2 156484512 156484754 -94203100 + L1ME1 LINE L1 5665 5899 -265 1176 167 9 20 chr2 156484759 156485098 -94202756 - Tigger2 DNA MER2_type -11 2707 2280 395 214 0 0 chr2 156485096 156485166 -94202688 + MER8 DNA MER2_type 170 239 0 * 565 277 30 52 chr2 156485166 156485437 -94202417 + L1ME1 LINE L1 5898 6162 -4 211 136 34 34 chr2 156485494 156485553 -94202301 + (CATATA)n Simple_repeat Simple_repeat 6 64 0 257 308 0 0 chr2 156485651 156485716 -94202138 - MIR3 SINE MIR -5 203 139 189 0 0 0 chr2 156485730 156485751 -94202103 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 7000 21 0 1 chr2 156485751 156486567 -94201287 - L1PA3 LINE L1 -10 6145 5331 860 148 19 12 chr2 156488038 156488200 -94199654 + L1PA13 LINE L1 5998 6160 -3 288 302 50 121 chr2 156488722 156489060 -94198794 - L2 LINE L2 -38 3275 2962 202 235 88 15 chr2 156489160 156489228 -94198626 - MIR SINE MIR -31 231 159 244 253 0 13 chr2 156489578 156489653 -94198201 + L1MC4 LINE L1 6626 6699 -1343 222 214 0 0 chr2 156490117 156490159 -94197695 + L2 LINE L2 2669 2710 -604 1307 299 90 1 chr2 156490245 156490775 -94197079 + L2 LINE L2 2732 3306 -7 805 247 11 0 chr2 156491978 156492152 -94195702 + MIR SINE MIR 55 230 -32 242 71 0 24 chr2 156492369 156492411 -94195443 + (GA)n Simple_repeat Simple_repeat 2 42 0 4214 127 17 19 chr2 156492425 156493442 -94194412 + L1PA15 LINE L1 5067 6160 -5 279 0 0 0 chr2 156493472 156493503 -94194351 + (CA)n Simple_repeat Simple_repeat 2 32 0 243 0 0 0 chr2 156493502 156493529 -94194325 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 7807 17 0 0 chr2 156493866 156495050 -94192804 - L1PA2 LINE L1 0 6155 4972 4601 17 0 0 chr2 156495050 156495583 -94192271 + L1PA2 LINE L1 4445 4977 -1169 200 208 0 0 chr2 156496222 156496270 -94191584 + T-rich Low_complexity Low_complexity 1 48 0 3084 42 0 8 chr2 156498861 156499247 -94188607 + L1PA4 LINE L1 5770 6152 -3 772 160 15 0 chr2 156500053 156500184 -94187670 + FLAM_A SINE Alu 1 133 0 35 54 0 0 chr2 156500465 156500521 -94187333 + AT_rich Low_complexity Low_complexity 1 56 0 5218 168 81 16 chr2 156501373 156502484 -94185370 + L1MC1 LINE L1 5069 6256 -77 399 56 0 0 chr2 156502484 156502538 -94185316 + (TG)n Simple_repeat Simple_repeat 1 54 0 5218 168 81 16 chr2 156502538 156502621 -94185233 + L1MC1 LINE L1 6256 6332 -1 22 0 0 0 chr2 156504949 156504971 -94182883 + AT_rich Low_complexity Low_complexity 1 22 0 376 291 85 20 chr2 156505832 156506031 -94181823 + L1M4 LINE L1 4027 4238 -1908 214 261 0 15 chr2 156506970 156507035 -94180819 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 1938 118 0 4 chr2 156508647 156508948 -94178906 - AluSg SINE Alu 0 300 1 26 30 0 0 chr2 156508958 156508991 -94178863 + AT_rich Low_complexity Low_complexity 1 33 0 804 31 0 0 chr2 156511233 156511330 -94176524 + L1PA4 LINE L1 6050 6146 -9 270 333 0 13 chr2 156511789 156511939 -94175915 + L1 LINE L1 3477 3624 -2522 427 227 51 40 chr2 156512139 156512315 -94175539 + L1ME LINE L1 622 799 -5271 814 262 84 62 chr2 156512345 156513010 -94174844 + L1ME LINE L1 781 1460 -4620 * 977 296 121 17 chr2 156513000 156513453 -94174401 + L1MEc LINE L1 688 1092 -5304 410 0 20 0 chr2 156513453 156513503 -94174351 + (CA)n Simple_repeat Simple_repeat 2 52 0 977 296 121 17 chr2 156513503 156513893 -94173961 + L1MEc LINE L1 1092 1619 -4777 1475 342 65 25 chr2 156513893 156515202 -94172652 - HERV16 LTR ERVL -1938 3058 1664 1251 340 21 12 chr2 156515230 156515747 -94172107 - HERV16 LTR ERVL -3432 1564 1043 199 258 32 0 chr2 156516301 156516363 -94171491 + MIR SINE MIR 66 129 -133 1111 170 39 27 chr2 156516489 156516748 -94171106 + L1MA4 LINE L1 6039 6300 0 1948 211 7 56 chr2 156518171 156518805 -94169049 + L1MD3 LINE L1 7212 7828 -10 25 31 0 0 chr2 156519141 156519173 -94168681 + AT_rich Low_complexity Low_complexity 1 32 0 354 360 87 35 chr2 156519242 156519611 -94168243 - L2 LINE L2 -2 3311 2924 204 281 35 0 chr2 156520151 156520208 -94167646 - L2 LINE L2 -517 2797 2739 297 206 44 0 chr2 156521144 156521212 -94166642 - L1M4 LINE L1 -1394 5547 5477 335 205 71 31 chr2 156521327 156521454 -94166400 + L1M4 LINE L1 4595 4726 -1420 316 320 42 33 chr2 156521478 156521812 -94166042 - L1MCc LINE L1 -2538 4403 4067 1478 276 77 70 chr2 156521813 156522022 -94165832 - L1MCc LINE L1 -2846 4095 3889 1164 120 21 0 chr2 156522022 156522213 -94165641 - L1MA5A LINE L1 0 6297 6103 1478 276 77 70 chr2 156522213 156523214 -94164640 - L1MCc LINE L1 -3052 3889 2896 658 207 0 0 chr2 156523214 156523330 -94164524 - FLAM_C SINE Alu -17 116 1 1478 276 77 70 chr2 156523330 156524008 -94163846 - L1MCc LINE L1 -4045 2896 2224 405 0 0 0 chr2 156524008 156524053 -94163801 + (TG)n Simple_repeat Simple_repeat 1 45 0 1478 276 77 70 chr2 156524053 156525218 -94162636 - L1MCc LINE L1 -4717 2224 823 249 300 114 24 chr2 156525356 156525566 -94162288 - L1MCc LINE L1 -6104 319 91 312 311 84 9 chr2 156525789 156526014 -94161840 + L1M4 LINE L1 1177 1418 -5124 22 0 0 0 chr2 156526060 156526082 -94161772 + AT_rich Low_complexity Low_complexity 1 22 0 792 251 91 9 chr2 156526347 156526578 -94161276 - MIR SINE MIR -1 261 12 1263 158 0 68 chr2 156529639 156529746 -94158108 - L1PA16 LINE L1 0 6166 6053 1950 110 10 13 chr2 156529746 156530046 -94157808 + AluSg SINE Alu 1 299 -11 1263 158 0 68 chr2 156530046 156530217 -94157637 - L1PA16 LINE L1 -113 6053 5907 198 0 0 0 chr2 156530939 156530961 -94156893 + (T)n Simple_repeat Simple_repeat 1 22 0 1051 261 95 28 chr2 156532535 156532685 -94155169 - L1MDb LINE L1 -3930 2476 2338 1619 173 26 23 chr2 156532685 156532992 -94154862 - AluJb SINE Alu -2 310 3 1051 261 95 28 chr2 156532992 156533459 -94154395 - L1MDb LINE L1 -4068 2338 1792 197 33 33 0 chr2 156533459 156533489 -94154365 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1051 261 95 28 chr2 156533489 156533659 -94154195 - L1MDb LINE L1 -4614 1792 1635 470 214 156 115 chr2 156533671 156533863 -94153991 - MER20 DNA MER1_type -19 200 1 1074 261 148 26 chr2 156533863 156534644 -94153210 - L1MDb LINE L1 -4766 1640 794 1368 241 123 16 chr2 156534696 156535145 -94152709 + MLT1D LTR MaLR 7 503 -2 2071 132 13 7 chr2 156535975 156536288 -94151566 - AluSx SINE Alu 0 315 1 22 0 0 0 chr2 156536541 156536563 -94151291 + AT_rich Low_complexity Low_complexity 1 22 0 286 174 0 0 chr2 156536637 156536683 -94151171 + L2 LINE L2 3210 3255 -17 2308 52 3 7 chr2 156536717 156537037 -94150817 + AluY SINE Alu 1 319 0 345 24 0 0 chr2 156537805 156537847 -94150007 + (TG)n Simple_repeat Simple_repeat 2 43 0 233 395 24 6 chr2 156537879 156538046 -94149808 + L2 LINE L2 2231 2400 -914 2803 7 0 0 chr2 156539588 156539895 -94147959 - AluYb8 SINE Alu -11 307 1 28 61 0 0 chr2 156540126 156540175 -94147679 + AT_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr2 156541430 156541453 -94146401 + AT_rich Low_complexity Low_complexity 1 23 0 288 351 24 36 chr2 156541866 156542034 -94145820 + MER5B DNA MER1_type 6 171 -7 6087 164 25 24 chr2 156542055 156542596 -94145258 + L1MA4 LINE L1 4105 4644 -1656 1893 107 0 4 chr2 156542596 156542858 -94144996 + AluSg SINE Alu 35 295 -15 6087 164 25 24 chr2 156542858 156544264 -94143590 + L1MA4 LINE L1 4644 6060 -240 1889 113 11 0 chr2 156544264 156544530 -94143324 + AluSp SINE Alu 33 301 -12 6087 164 25 24 chr2 156544530 156544770 -94143084 + L1MA4 LINE L1 6060 6298 -2 26 88 0 0 chr2 156545777 156545845 -94142009 + AT_rich Low_complexity Low_complexity 1 68 0 2353 91 0 0 chr2 156545984 156546291 -94141563 - AluY SINE Alu -4 307 1 23 0 0 0 chr2 156546713 156546736 -94141118 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 156546800 156546822 -94141032 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr2 156547051 156547089 -94140765 + AT_rich Low_complexity Low_complexity 1 38 0 1214 255 42 12 chr2 156548201 156548538 -94139316 - MER90 LTR ERV1 -9 605 259 1106 94 0 6 chr2 156549487 156549647 -94138207 - L1MA2 LINE L1 0 6304 6146 2055 136 36 36 chr2 156549683 156550044 -94137810 - THE1B LTR MaLR 0 364 4 11069 100 2 8 chr2 156550052 156551576 -94136278 - THE1B-int LTR MaLR -12 1568 55 1273 121 28 0 chr2 156551682 156551864 -94135990 - THE1B LTR MaLR -164 200 14 335 158 61 0 chr2 156551899 156552064 -94135790 + (TA)n Simple_repeat Simple_repeat 2 176 0 374 57 98 8 chr2 156552107 156552229 -94135625 + (TA)n Simple_repeat Simple_repeat 2 134 0 444 143 0 0 chr2 156552499 156552583 -94135271 + L1MA4A LINE L1 6216 6299 -4 323 325 17 25 chr2 156552583 156552703 -94135151 + MER5B DNA MER1_type 57 175 -3 446 228 0 79 chr2 156552709 156552836 -94135018 + L2 LINE L2 3196 3312 -1 424 308 43 26 chr2 156553023 156553370 -94134484 - L1M4 LINE L1 -1772 4374 4022 352 274 117 11 chr2 156553368 156553547 -94134307 - L1MEc LINE L1 -4638 1672 1475 * 327 302 84 42 chr2 156553651 156554128 -94133726 - L1MEc LINE L1 -5008 1111 740 1981 149 0 0 chr2 156554216 156554512 -94133342 - AluSx SINE Alu -16 296 1 1396 224 32 3 chr2 156555301 156555644 -94132210 + L1MDa LINE L1 1088 1440 -5103 455 279 37 0 chr2 156555677 156555813 -94132041 + L1MDb LINE L1 1734 1874 -4666 2001 210 96 101 chr2 156555869 156556260 -94131594 + L1MDa LINE L1 1514 1905 -4635 2134 122 23 49 chr2 156556260 156556645 -94131209 - THE1C LTR MaLR 0 375 1 2001 210 96 101 chr2 156556645 156557259 -94130595 + L1MDa LINE L1 1905 2514 -4026 * 2580 216 34 8 chr2 156557256 156557867 -94129987 + L1MD2 LINE L1 5712 6338 -21 284 257 97 65 chr2 156558357 156558622 -94129232 + MLT1I LTR MaLR 98 407 -2 302 60 0 20 chr2 156559023 156559073 -94128781 + (TTG)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr2 156559275 156559303 -94128551 + AT_rich Low_complexity Low_complexity 1 28 0 1862 226 48 46 chr2 156559507 156560048 -94127806 - LTR9 LTR ERV1 -63 549 8 1068 224 43 80 chr2 156561018 156561082 -94126772 - MER69 DNA AcHobo -106 2420 2355 2345 86 0 13 chr2 156561082 156561395 -94126459 + AluY SINE Alu 3 311 0 1068 224 43 80 chr2 156561395 156561768 -94126086 - MER69 DNA AcHobo -171 2355 1999 725 279 106 13 chr2 156561931 156562070 -94125784 - MER69 DNA AcHobo -2206 320 195 918 244 67 56 chr2 156562070 156562430 -94125424 - MLT1A1 LTR MaLR -1 364 1 725 279 106 13 chr2 156562430 156562527 -94125327 - MER69 DNA AcHobo -2331 195 62 462 299 37 43 chr2 156562549 156562844 -94125010 + L3 LINE CR1 1073 1438 -139 239 120 0 20 chr2 156563708 156563758 -94124096 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 256 308 69 0 chr2 156563813 156563943 -94123911 - L1ME3A LINE L1 -213 5957 5819 32 75 0 0 chr2 156564009 156564076 -94123778 + AT_rich Low_complexity Low_complexity 1 67 0 4058 219 48 10 chr2 156564693 156565708 -94122146 - L1 LINE L1 -988 5158 4105 1656 227 150 4 chr2 156565790 156566244 -94121610 - MLT2B1 LTR ERVL 0 520 1 4291 162 101 11 chr2 156566244 156567205 -94120649 - ERVL-B1 LTR ERVL -7 5757 4609 534 209 36 107 chr2 156567205 156567401 -94120453 - MLT2B1 LTR ERVL -200 320 139 4554 176 48 6 chr2 156567401 156568192 -94119662 - ERVL-B1 LTR ERVL -1174 4590 3767 2214 125 24 16 chr2 156568245 156568614 -94119240 - L1PB3 LINE L1 -1 6210 5839 249 224 0 0 chr2 156568614 156568672 -94119182 + (TA)n Simple_repeat Simple_repeat 1 58 0 231 24 49 0 chr2 156568673 156568714 -94119140 + LTR66 LTR ERVL 397 439 -171 12098 219 42 17 chr2 156568725 156570666 -94117188 - L1PB3 LINE L1 -363 5848 3956 2294 92 0 0 chr2 156570666 156570972 -94116882 - AluY SINE Alu -5 306 1 12098 219 42 17 chr2 156570972 156574013 -94113841 - L1PB3 LINE L1 -2255 3956 746 6918 211 33 3 chr2 156574053 156575736 -94112118 - ERVL LTR ERVL -1552 3933 2178 1816 224 61 3 chr2 156575736 156576098 -94111756 - MER70A LTR ERVL 0 472 90 910 206 0 6 chr2 156576097 156576257 -94111597 - MER70B LTR ERVL -419 159 1 * 3135 205 17 16 chr2 156576257 156576711 -94111143 - ERVL LTR ERVL -3543 2221 1764 1291 196 18 101 chr2 156576711 156577109 -94110745 + MLT1A1 LTR MaLR 1 365 0 3135 205 17 16 chr2 156577109 156577292 -94110562 - ERVL LTR ERVL -4000 1764 1583 2646 240 19 17 chr2 156577299 156578117 -94109737 - ERVL LTR ERVL -4525 1239 461 708 275 64 54 chr2 156578122 156578605 -94109249 + L1MEc LINE L1 1614 2101 -4295 25 0 0 0 chr2 156579840 156579865 -94107989 + AT_rich Low_complexity Low_complexity 1 25 0 349 318 26 26 chr2 156580145 156580334 -94107520 - MLT1K LTR MaLR 0 588 400 227 332 79 50 chr2 156581464 156581666 -94106188 + MIR SINE MIR 9 216 -46 875 177 11 32 chr2 156581667 156581853 -94106001 - L1MC3 LINE L1 -22 7763 7582 227 332 79 50 chr2 156582481 156582683 -94105171 + MIR SINE MIR 9 216 -46 1137 193 22 29 chr2 156582684 156582958 -94104896 - L1MC3 LINE L1 -22 7763 7492 207 0 0 0 chr2 156583369 156583392 -94104462 + (TTG)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 156583575 156583597 -94104257 + AT_rich Low_complexity Low_complexity 1 22 0 236 208 0 28 chr2 156583730 156583802 -94104052 + (CATATA)n Simple_repeat Simple_repeat 5 74 0 1905 80 15 0 chr2 156584265 156584527 -94103327 + L1PA11 LINE L1 5906 6171 -3 2191 86 0 0 chr2 156584613 156584915 -94102939 - AluSc SINE Alu 0 302 1 312 222 0 28 chr2 156585056 156585128 -94102726 - MIR SINE MIR -128 134 65 714 327 65 26 chr2 156586420 156586885 -94100969 + MER20B DNA MER1_type 4 486 -297 21 57 0 0 chr2 156587342 156587377 -94100477 + AT_rich Low_complexity Low_complexity 1 35 0 218 222 0 0 chr2 156587776 156587821 -94100033 + (TTA)n Simple_repeat Simple_repeat 1 45 0 2027 50 8 4 chr2 156588426 156588688 -94099166 + L1PA6 LINE L1 5887 6149 -5 22 35 0 0 chr2 156588731 156588760 -94099094 + AT_rich Low_complexity Low_complexity 1 29 0 196 395 97 8 chr2 156589538 156589662 -94098192 - MER5B DNA MER1_type -42 136 2 13240 225 30 41 chr2 156590074 156591674 -94096180 - L1PA15 LINE L1 0 6489 4873 1106 126 6 0 chr2 156591674 156591836 -94096018 + L1PB3 LINE L1 5980 6147 -7 13240 225 30 41 chr2 156591836 156593738 -94094116 - L1PA15 LINE L1 -1616 4873 3025 533 14 29 0 chr2 156593738 156593807 -94094047 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 13240 225 30 41 chr2 156593807 156595212 -94092642 - L1PA15 LINE L1 -3464 3025 1606 582 188 30 0 chr2 156595249 156595350 -94092504 - U6 snRNA snRNA 0 107 4 325 314 64 19 chr2 156596099 156596255 -94091599 + MIR3 SINE MIR 41 203 -5 21 0 0 0 chr2 156596332 156596353 -94091501 + AT_rich Low_complexity Low_complexity 1 21 0 193 305 49 37 chr2 156596462 156596544 -94091310 + MER5A DNA MER1_type 106 188 -1 1375 269 45 21 chr2 156596731 156597258 -94090596 + L1ME1 LINE L1 5583 6122 -44 40 21 0 0 chr2 156598381 156598428 -94089426 + AT_rich Low_complexity Low_complexity 1 47 0 417 39 0 0 chr2 156598848 156598899 -94088955 + (TC)n Simple_repeat Simple_repeat 1 51 0 324 0 0 0 chr2 156598898 156598934 -94088920 + (CA)n Simple_repeat Simple_repeat 1 36 0 * 306 90 0 45 chr2 156599806 156599873 -94087981 + (TTA)n Simple_repeat Simple_repeat 3 66 0 240 178 0 59 chr2 156599881 156599982 -94087872 + (TA)n Simple_repeat Simple_repeat 2 96 0 374 325 65 25 chr2 156600001 156600201 -94087653 - L2 LINE L2 -636 2678 2471 313 228 13 32 chr2 156600234 156600392 -94087462 + (TA)n Simple_repeat Simple_repeat 1 155 0 1236 316 29 0 chr2 156600850 156601264 -94086590 + L2 LINE L2 1451 1876 -1438 1224 289 65 94 chr2 156601287 156602264 -94085590 + L2 LINE L2 2340 3303 -10 777 215 23 11 chr2 156602264 156602441 -94085413 + MLT1D LTR MaLR 1 179 -326 1122 149 10 25 chr2 156602444 156602645 -94085209 - L1PA15 LINE L1 -1 6164 5967 798 223 65 5 chr2 156602738 156602922 -94084932 + MLT1D LTR MaLR 310 504 -1 21 0 0 0 chr2 156603076 156603097 -94084757 + AT_rich Low_complexity Low_complexity 1 21 0 852 265 114 30 chr2 156603662 156604428 -94083426 - L1MEc LINE L1 -4753 1643 814 1403 172 74 74 chr2 156604768 156605158 -94082696 - MLT1B LTR MaLR 0 390 1 648 221 0 14 chr2 156605158 156605303 -94082551 - MLT1B-int LTR MaLR 0 1735 1593 * 4996 191 76 88 chr2 156605299 156607182 -94080672 + L1M1 LINE L1 11 2231 -5334 2100 171 20 0 chr2 156607182 156607539 -94080315 - THE1B LTR MaLR 0 364 1 8008 204 30 6 chr2 156607539 156609149 -94078705 - THE1B-int LTR MaLR 0 1651 3 2248 135 28 6 chr2 156609151 156609507 -94078347 - THE1B LTR MaLR 0 364 1 7118 175 28 38 chr2 156609507 156609884 -94077970 + L1M1 LINE L1 2227 2606 -4959 241 89 0 0 chr2 156609884 156609929 -94077925 + LTR66 LTR ERVL 394 438 -172 7118 175 28 38 chr2 156609929 156612304 -94075550 + L1M1 LINE L1 2606 4993 -2572 5243 166 33 5 chr2 156612304 156613515 -94074339 + L1PA15 LINE L1 4919 6165 0 5733 174 14 118 chr2 156613562 156615253 -94072601 + L1M1 LINE L1 4981 6495 -1070 984 240 87 58 chr2 156615579 156616012 -94071842 - MLT1B-int LTR MaLR -493 878 342 1252 256 48 32 chr2 156616012 156616454 -94071400 + MSTB2 LTR MaLR 9 457 0 1034 181 6 0 chr2 156616454 156616678 -94071176 - MLT1B-int LTR MaLR -1028 343 1 1308 185 23 128 chr2 156616680 156617108 -94070746 - MLT1B LTR MaLR -7 383 1 204 40 0 0 chr2 156617845 156617870 -94069984 + (GA)n Simple_repeat Simple_repeat 2 26 0 29 60 0 0 chr2 156618859 156618909 -94068945 + AT_rich Low_complexity Low_complexity 1 50 0 709 182 0 15 chr2 156619830 156619997 -94067857 + FLAM_C SINE Alu 1 133 0 200 209 30 30 chr2 156620114 156620181 -94067673 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 2436 36 0 23 chr2 156620464 156620768 -94067086 + AluY SINE Alu 1 297 -14 6028 233 46 69 chr2 156620989 156622617 -94065237 + L1M4b LINE L1 5 2016 -4942 524 199 15 66 chr2 156622617 156622753 -94065101 + FLAM_A SINE Alu 4 132 -1 6028 233 46 69 chr2 156622753 156623212 -94064642 + L1M4b LINE L1 2016 2484 -4474 394 130 0 14 chr2 156623215 156623284 -94064570 - MLT1D LTR MaLR 0 505 438 1427 147 126 11 chr2 156623286 156623571 -94064283 + THE1C LTR MaLR 1 318 -57 6842 32 2 0 chr2 156623624 156624773 -94063081 - L1P1 LINE L1 -446 5709 4559 3804 29 2 0 chr2 156624771 156625227 -94062627 + L1P1 LINE L1 4113 4569 -1577 * 2263 92 0 13 chr2 156625967 156626271 -94061583 + AluSc SINE Alu 2 301 -8 272 217 0 85 chr2 156626274 156626380 -94061474 + MER5C DNA MER1_type 227 323 -1 35 41 0 0 chr2 156626888 156626937 -94060917 + AT_rich Low_complexity Low_complexity 1 49 0 2400 72 7 0 chr2 156628331 156628638 -94059216 + AluY SINE Alu 1 309 -2 22 88 0 0 chr2 156628786 156628843 -94059011 + AT_rich Low_complexity Low_complexity 1 57 0 282 239 28 18 chr2 156628843 156628952 -94058902 + (TA)n Simple_repeat Simple_repeat 1 110 0 38 39 0 0 chr2 156629124 156629176 -94058678 + AT_rich Low_complexity Low_complexity 1 52 0 1236 224 98 98 chr2 156629587 156630106 -94057748 + MLT2B1 LTR ERVL 2 520 0 262 219 0 41 chr2 156631213 156631286 -94056568 + MLT2D LTR ERVL 1 70 -344 201 291 70 23 chr2 156631328 156631414 -94056440 + MIR SINE MIR 67 156 -106 189 107 0 0 chr2 156631616 156631644 -94056210 + (TG)n Simple_repeat Simple_repeat 2 29 0 298 163 0 0 chr2 156631649 156631698 -94056156 + MLT2B1 LTR ERVL 472 520 0 204 227 0 0 chr2 156631869 156631913 -94055941 + GA-rich Low_complexity Low_complexity 3 46 0 246 404 66 0 chr2 156632465 156632663 -94055191 + L2 LINE L2 2846 3056 -257 4735 284 58 28 chr2 156633165 156635546 -94052308 + L1MB8 LINE L1 13 2468 -4491 2212 158 64 7 chr2 156635605 156636010 -94051844 + MSTA LTR MaLR 1 428 0 7755 247 68 34 chr2 156636191 156637895 -94049959 + L1MB8 LINE L1 2663 4308 -2649 1273 181 67 26 chr2 156637895 156638165 -94049689 + AluJb SINE Alu 3 283 -29 7755 247 68 34 chr2 156638165 156639692 -94048162 + L1MB8 LINE L1 4308 5967 -990 3011 218 60 15 chr2 156639711 156640504 -94047350 + L1MB8 LINE L1 6149 6980 -9 180 0 0 0 chr2 156641345 156641365 -94046489 + (CA)n Simple_repeat Simple_repeat 2 21 0 701 79 10 0 chr2 156643262 156643363 -94044491 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 2280 91 0 16 chr2 156644271 156644580 -94043274 - AluY SINE Alu -7 304 1 889 244 130 64 chr2 156644659 156645205 -94042649 - MER34C LTR ERV1 -3 582 1 398 172 0 4 chr2 156645439 156645523 -94042331 + MER21A LTR ERV1 1 83 -780 527 119 0 89 chr2 156645624 156645725 -94042129 + MER21A LTR ERV1 74 165 -766 2944 212 64 76 chr2 156645731 156646544 -94041310 + MER21A LTR ERV1 103 905 -26 192 158 0 0 chr2 156646837 156646875 -94040979 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 279 17 0 102 chr2 156647273 156647332 -94040522 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 247 245 181 0 chr2 156647338 156647432 -94040422 + LTR33 LTR ERVL 11 121 -400 1404 216 45 21 chr2 156647592 156647926 -94039928 - MER67C LTR ERV1 -307 403 62 336 231 37 9 chr2 156648053 156648161 -94039693 + T-rich Low_complexity Low_complexity 2 112 0 320 129 24 57 chr2 156648224 156648348 -94039506 + T-rich Low_complexity Low_complexity 1 120 0 1494 186 78 27 chr2 156648455 156648826 -94039028 + MLT1B LTR MaLR 1 390 0 383 348 50 6 chr2 156649550 156649731 -94038123 + MIR SINE MIR 60 248 -14 321 157 0 0 chr2 156649996 156650047 -94037807 - MER67D LTR ERV1 -463 51 1 3368 156 17 5 chr2 156651763 156652347 -94035507 - MER39B LTR ERV1 0 653 63 479 229 28 14 chr2 156653450 156653594 -94034260 + L1MA10 LINE L1 6185 6330 -4 752 271 164 22 chr2 156653624 156654027 -94033827 + L1M4 LINE L1 2816 3275 -2871 2714 81 56 2 chr2 156654028 156654405 -94033449 + MLT2A2 LTR ERVL 1 506 -48 276 91 0 0 chr2 156654405 156654449 -94033405 + (TA)n Simple_repeat Simple_repeat 2 45 0 2714 81 56 2 chr2 156654449 156654460 -94033394 + MLT2A2 LTR ERVL 506 515 -39 361 306 53 29 chr2 156655255 156655425 -94032429 - MLT1J2 LTR MaLR -276 174 1 22 56 0 0 chr2 156655444 156655480 -94032374 + AT_rich Low_complexity Low_complexity 1 36 0 1631 279 78 26 chr2 156657051 156657880 -94029974 - L1ME3 LINE L1 -202 5960 5096 446 275 122 29 chr2 156657883 156658326 -94029528 - L1ME3 LINE L1 -1289 4857 4374 239 154 0 0 chr2 156658376 156658415 -94029439 - MLT2A2 LTR ERVL 0 453 415 234 0 0 0 chr2 156658415 156658441 -94029413 + (TA)n Simple_repeat Simple_repeat 1 26 0 2066 113 37 3 chr2 156658683 156658983 -94028871 - AluSg SINE Alu 0 310 1 23 0 0 0 chr2 156659011 156659034 -94028820 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 156659068 156659103 -94028751 + AT_rich Low_complexity Low_complexity 1 35 0 518 291 58 49 chr2 156660093 156660419 -94027435 - LTR16A LTR ERVL -13 437 109 379 167 0 0 chr2 156660612 156660672 -94027182 - THE1C LTR MaLR 0 375 316 22 35 0 0 chr2 156661743 156661772 -94026082 + AT_rich Low_complexity Low_complexity 1 29 0 210 241 38 0 chr2 156661819 156661898 -94025956 + (TATAA)n Simple_repeat Simple_repeat 2 83 0 21 71 0 0 chr2 156661919 156661961 -94025893 + AT_rich Low_complexity Low_complexity 1 42 0 3182 172 54 14 chr2 156662626 156663271 -94024583 + LTR51 LTR ERV1 1 671 0 589 178 0 28 chr2 156663293 156663400 -94024454 - MER57A LTR ERV1 -27 376 273 663 119 0 0 chr2 156663503 156663604 -94024250 - MER57A LTR ERV1 -302 101 1 6850 63 7 1 chr2 156663611 156664694 -94023160 + L1PA6 LINE L1 5065 6152 -2 438 20 0 0 chr2 156665006 156665057 -94022797 + (CA)n Simple_repeat Simple_repeat 2 52 0 1653 158 40 0 chr2 156665391 156665702 -94022152 + AluSx SINE Alu 1 322 0 692 251 159 14 chr2 156665723 156666006 -94021848 + L1ME3A LINE L1 4608 4931 -1215 21 0 0 0 chr2 156666554 156666575 -94021279 + AT_rich Low_complexity Low_complexity 1 21 0 609 276 35 58 chr2 156666779 156667399 -94020455 + L1ME3A LINE L1 5451 6160 -2 1165 129 46 0 chr2 156667521 156667738 -94020116 - L1MA8 LINE L1 -2 6289 6063 2204 71 46 0 chr2 156667847 156668128 -94019726 + AluY SINE Alu 1 294 -17 259 261 133 13 chr2 156668351 156668462 -94019392 - MIR SINE MIR -59 149 42 180 0 0 0 chr2 156669000 156669020 -94018834 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 1583 232 62 23 chr2 156670372 156670811 -94017043 - L1ME2 LINE L1 -90 6074 5619 357 119 24 60 chr2 156670815 156670899 -94016955 + L1ME LINE L1 5634 5714 -452 21 36 0 0 chr2 156674498 156674526 -94013328 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr2 156675889 156675915 -94011939 + (CA)n Simple_repeat Simple_repeat 2 27 0 273 235 47 0 chr2 156675941 156676026 -94011828 + L1MC4 LINE L1 6614 6702 -1340 690 208 0 16 chr2 156676038 156676221 -94011633 + (TA)n Simple_repeat Simple_repeat 1 180 0 218 304 14 14 chr2 156676690 156676759 -94011095 + L2 LINE L2 1851 1919 -1395 3038 33 0 0 chr2 156677331 156677697 -94010157 - L1PA4 LINE L1 -4 6151 5786 2759 18 17 0 chr2 156677697 156678184 -94009670 + L1P2 LINE L1 5053 5545 -610 5078 109 17 17 chr2 156679508 156679872 -94007982 - L1PB1 LINE L1 -3 6148 5785 468 0 0 0 chr2 156679872 156679924 -94007930 + (TA)n Simple_repeat Simple_repeat 2 53 0 5078 109 17 17 chr2 156679924 156680301 -94007553 - L1PB1 LINE L1 -366 5785 5404 2038 137 25 27 chr2 156680301 156680666 -94007188 - THE1B LTR MaLR 0 364 1 5078 109 17 17 chr2 156680666 156680736 -94007118 - L1PB1 LINE L1 -746 5405 5336 257 324 129 0 chr2 156681099 156681377 -94006477 - L1ME LINE L1 -223 5898 5585 23 54 0 0 chr2 156682586 156682623 -94005231 + AT_rich Low_complexity Low_complexity 1 37 0 49 95 0 0 chr2 156682683 156682830 -94005024 + AT_rich Low_complexity Low_complexity 1 147 0 847 207 6 6 chr2 156683026 156683190 -94004664 + FRAM SINE Alu 1 161 -15 23 0 0 0 chr2 156683313 156683336 -94004518 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 156683390 156683414 -94004440 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 156683911 156683946 -94003908 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr2 156684009 156684052 -94003802 + AT_rich Low_complexity Low_complexity 1 43 0 2262 154 14 0 chr2 156684555 156684925 -94002929 + THE1C LTR MaLR 1 375 0 21 36 0 0 chr2 156685025 156685053 -94002801 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 156685185 156685212 -94002642 + AT_rich Low_complexity Low_complexity 1 27 0 302 244 12 0 chr2 156685700 156685782 -94002072 + (TA)n Simple_repeat Simple_repeat 1 83 0 1323 193 13 23 chr2 156686368 156686668 -94001186 + AluJo SINE Alu 1 297 -15 208 337 30 30 chr2 156687129 156687230 -94000624 - MIR SINE MIR -115 147 47 399 304 9 9 chr2 156687684 156687799 -94000055 - MIR SINE MIR -139 123 9 183 268 0 24 chr2 156687821 156687862 -93999992 + L2 LINE L2 3237 3276 -37 30 0 0 0 chr2 156691187 156691217 -93996637 + AT_rich Low_complexity Low_complexity 1 30 0 873 262 68 64 chr2 156691309 156691748 -93996106 - LTR9 LTR ERV1 0 612 172 37 0 0 0 chr2 156691779 156691816 -93996038 + AT_rich Low_complexity Low_complexity 1 37 0 4727 155 33 23 chr2 156692670 156693042 -93994812 + L1MA8 LINE L1 4955 5322 -969 1896 166 10 0 chr2 156693042 156693338 -93994516 + AluSx SINE Alu 1 299 -13 4727 155 33 23 chr2 156693338 156694136 -93993718 + L1MA8 LINE L1 5322 6139 -152 26 30 0 0 chr2 156694609 156694642 -93993212 + AT_rich Low_complexity Low_complexity 1 33 0 1696 164 0 18 chr2 156696360 156696676 -93991178 - AluJo SINE Alu 0 317 7 271 341 12 0 chr2 156696695 156696777 -93991077 - L2 LINE L2 -2 3311 3229 7767 16 0 0 chr2 156696869 156698099 -93989755 - L1PA2 LINE L1 0 6155 4973 336 318 137 33 chr2 156699308 156699630 -93988224 + L2 LINE L2 2781 3134 -179 560 259 160 14 chr2 156699685 156699897 -93987957 + MLT1D LTR MaLR 3 245 -260 399 245 21 0 chr2 156699954 156700048 -93987806 + MLT1D LTR MaLR 402 497 -8 2908 209 57 29 chr2 156700061 156700816 -93987038 - LTR48 LTR ERV1 -16 742 1 233 244 0 0 chr2 156700840 156700885 -93986969 + L2 LINE L2 3183 3227 -86 207 186 0 23 chr2 156701010 156701053 -93986801 + (CA)n Simple_repeat Simple_repeat 1 42 0 4212 252 26 55 chr2 156702599 156703862 -93983992 + L1MB7 LINE L1 3 1222 -5320 2092 62 15 0 chr2 156703862 156704136 -93983718 + L1PA4 LINE L1 5875 6152 -3 4212 252 26 55 chr2 156704136 156704295 -93983559 + L1MB7 LINE L1 1222 1384 -5158 597 97 0 0 chr2 156704330 156704433 -93983421 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 388 208 0 0 chr2 156704469 156704541 -93983313 + Tigger5 DNA MER2_type 2249 2320 -3 360 253 0 13 chr2 156704541 156704619 -93983235 - Tigger5 DNA MER2_type -2245 78 2 1025 277 16 3 chr2 156704623 156704944 -93982910 + L1MB7 LINE L1 1509 1833 -4813 1477 255 24 6 chr2 156704956 156705447 -93982407 + L1MB7 LINE L1 3192 3691 -2953 * 3240 238 23 37 chr2 156705445 156705504 -93982350 + L1MB7 LINE L1 5295 5353 -1329 1788 165 7 0 chr2 156705504 156705801 -93982053 - AluSx SINE Alu -11 301 3 3240 238 23 37 chr2 156705801 156707133 -93980721 + L1MB7 LINE L1 5353 6657 -25 24 53 0 0 chr2 156707193 156707231 -93980623 + AT_rich Low_complexity Low_complexity 1 38 0 222 226 16 32 chr2 156707393 156707455 -93980399 + MIR SINE MIR 83 143 -119 23 0 0 0 chr2 156707549 156707572 -93980282 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 156709593 156709614 -93978240 + AT_rich Low_complexity Low_complexity 1 21 0 331 253 139 38 chr2 156711002 156711160 -93976694 - LTR41 LTR ERVL -595 178 5 2041 143 22 22 chr2 156711597 156711961 -93975893 - THE1B LTR MaLR 0 364 1 4488 178 19 18 chr2 156712100 156712982 -93974872 + L1MB3 LINE L1 5301 6183 0 255 224 94 24 chr2 156712996 156713081 -93974773 - MIR SINE MIR -156 106 16 191 243 159 37 chr2 156713389 156713496 -93974358 - L2 LINE L2 -3 3310 3191 526 214 156 39 chr2 156713741 156713895 -93973959 - MER5A DNA MER1_type -6 183 12 337 225 116 39 chr2 156713895 156714024 -93973830 + MLT1L LTR MaLR 134 272 -343 306 249 196 48 chr2 156715146 156715355 -93972499 + L2 LINE L2 3072 3311 -2 843 152 22 13 chr2 156715358 156715591 -93972263 + GA-rich Low_complexity Low_complexity 1 235 0 22 94 0 0 chr2 156716792 156716856 -93970998 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr2 156716955 156716977 -93970877 + AT_rich Low_complexity Low_complexity 1 22 0 1597 170 20 47 chr2 156717561 156717861 -93969993 - AluSx SINE Alu -20 292 1 893 213 58 10 chr2 156717974 156718181 -93969673 + MER20 DNA MER1_type 3 219 0 273 196 22 22 chr2 156718978 156719070 -93968784 + GA-rich Low_complexity Low_complexity 3 94 0 24 32 0 0 chr2 156719353 156719384 -93968470 + AT_rich Low_complexity Low_complexity 1 31 0 209 358 0 12 chr2 156719438 156719519 -93968335 - L2 LINE L2 0 3313 3234 23 97 0 0 chr2 156719530 156719602 -93968252 + AT_rich Low_complexity Low_complexity 1 72 0 22 0 0 0 chr2 156719797 156719819 -93968035 + AT_rich Low_complexity Low_complexity 1 22 0 330 281 146 39 chr2 156720080 156720258 -93967596 - MIR SINE MIR -13 249 53 22 35 0 0 chr2 156720303 156720332 -93967522 + AT_rich Low_complexity Low_complexity 1 29 0 602 183 17 0 chr2 156720604 156720719 -93967135 + FRAM SINE Alu 22 138 -38 237 65 0 0 chr2 156722442 156722473 -93965381 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 269 304 0 43 chr2 156722988 156723103 -93964751 - MIR SINE MIR 0 262 153 298 352 0 39 chr2 156723185 156723313 -93964541 - MIR SINE MIR -87 175 53 21 36 0 0 chr2 156723400 156723428 -93964426 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 156723548 156723573 -93964281 + AT_rich Low_complexity Low_complexity 1 25 0 281 294 49 11 chr2 156724571 156724755 -93963099 + HAL1 LINE L1 1157 1347 -1160 362 350 30 47 chr2 156725122 156725548 -93962306 + L1MC/D LINE L1 2202 2620 -3526 23 0 0 0 chr2 156725689 156725712 -93962142 + AT_rich Low_complexity Low_complexity 1 23 0 369 292 131 54 chr2 156725787 156726126 -93961728 + L1MC/D LINE L1 3153 3528 -2618 24 24 0 24 chr2 156726355 156726366 -93961488 + AT_rich Low_complexity Low_complexity 1 11 -30 4585 133 6 1 chr2 156726366 156727093 -93960761 + L1MA2 LINE L1 5575 6304 0 24 24 0 24 chr2 156727093 156727123 -93960731 + AT_rich Low_complexity Low_complexity 11 41 0 314 375 31 0 chr2 156727190 156727382 -93960472 + L1MC/D LINE L1 5439 5636 -2172 202 224 0 0 chr2 156728561 156728610 -93959244 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 233 315 59 73 chr2 156729768 156730108 -93957746 + L3 LINE CR1 923 1257 -320 221 302 73 42 chr2 156730221 156730317 -93957537 + L3b LINE CR1 1485 1583 0 203 343 65 9 chr2 156730976 156731084 -93956770 + MIR3 SINE MIR 89 202 -6 2781 86 0 5 chr2 156731338 156731721 -93956133 - L1PA8 LINE L1 -4 6168 5788 3670 86 12 0 chr2 156731721 156732302 -93955552 + L1PA8 LINE L1 5176 5762 -410 2222 109 0 0 chr2 156732657 156732950 -93954904 + AluSg SINE Alu 1 293 -17 23 0 0 0 chr2 156733363 156733386 -93954468 + AT_rich Low_complexity Low_complexity 1 23 0 6261 69 21 0 chr2 156733471 156734316 -93953538 - L1PA7 LINE L1 -5 6149 5287 3389 224 13 9 chr2 156734288 156735051 -93952803 - L1 LINE L1 -1773 4373 3608 * 486 186 76 42 chr2 156735056 156735174 -93952680 - MER31B LTR ERV1 -344 122 1 203 349 83 54 chr2 156735579 156735820 -93952034 + MIR SINE MIR 13 260 -2 2192 92 13 3 chr2 156736747 156737051 -93950803 + AluY SINE Alu 3 309 -2 210 71 0 0 chr2 156737052 156737080 -93950774 + (GGAGAA)n Simple_repeat Simple_repeat 4 31 0 2018 116 0 7 chr2 156737093 156737387 -93950467 + AluSx SINE Alu 1 292 -20 2262 227 55 96 chr2 156738040 156738877 -93948977 - MER21B LTR ERV1 -60 803 1 37 60 0 12 chr2 156739184 156739218 -93948636 + AT_rich Low_complexity Low_complexity 1 34 -48 2115 111 0 0 chr2 156739218 156739506 -93948348 - AluSx SINE Alu -13 299 12 37 60 0 12 chr2 156739506 156739554 -93948300 + AT_rich Low_complexity Low_complexity 34 82 0 2292 90 0 3 chr2 156739566 156739878 -93947976 - AluY SINE Alu 0 311 1 272 27 27 0 chr2 156740123 156740160 -93947694 + (TA)n Simple_repeat Simple_repeat 2 39 0 776 198 54 6 chr2 156742224 156742391 -93945463 + FRAM SINE Alu 1 175 -1 427 319 53 15 chr2 156742597 156743052 -93944802 + L1M4 LINE L1 4771 5242 -904 419 228 16 8 chr2 156743078 156743201 -93944653 - L1M LINE L1 -2422 5386 5263 1138 214 111 4 chr2 156743203 156743299 -93944555 - MER93b LTR ERV1 -79 294 210 2441 131 8 5 chr2 156743299 156743673 -93944181 - THE1C LTR MaLR 0 375 1 1138 214 111 4 chr2 156743673 156743838 -93944016 - MER93b LTR ERV1 -163 210 5 815 232 71 60 chr2 156743847 156744183 -93943671 - MER57-int LTR ERV1 -398 7139 6800 2727 281 61 29 chr2 156744415 156744839 -93943015 + L1MC4a LINE L1 6186 6595 -1213 2095 116 0 7 chr2 156744839 156745132 -93942722 + AluSc SINE Alu 1 291 -18 227 79 26 0 chr2 156745142 156745180 -93942674 + (TG)n Simple_repeat Simple_repeat 2 40 0 2727 281 61 29 chr2 156745180 156745964 -93941890 + L1MC4a LINE L1 6603 7444 -364 1203 228 16 5 chr2 156745974 156746226 -93941628 - MLT1D LTR MaLR -9 496 252 629 293 15 11 chr2 156746351 156746617 -93941237 + L1MC4 LINE L1 7775 8041 -1 180 357 0 0 chr2 156748052 156748094 -93939760 - L2 LINE L2 -16 3256 3215 1828 205 125 0 chr2 156748126 156748551 -93939303 - MLT1D LTR MaLR 0 505 28 547 149 0 0 chr2 156748551 156748638 -93939216 - AluS SINE Alu -226 87 1 241 219 0 0 chr2 156748640 156748681 -93939173 - MLT1D LTR MaLR -464 41 1 197 324 0 14 chr2 156751301 156751372 -93936482 + L3 LINE CR1 1248 1317 -260 1681 209 11 17 chr2 156751424 156751778 -93936076 - MLT1A1 LTR MaLR -4 361 10 292 157 20 0 chr2 156751795 156751846 -93936008 - MLT2C2 LTR ERVL 0 464 413 22 0 0 0 chr2 156751954 156751976 -93935878 + AT_rich Low_complexity Low_complexity 1 22 0 2028 128 7 0 chr2 156752920 156753217 -93934637 + AluSp SINE Alu 1 299 -14 27 62 0 0 chr2 156753419 156753467 -93934387 + AT_rich Low_complexity Low_complexity 1 48 0 506 285 123 52 chr2 156753507 156754043 -93933811 + HAL1b LINE L1 280 853 -495 348 299 74 32 chr2 156754346 156754563 -93933291 + L1MC4a LINE L1 2205 2430 -3716 576 265 56 0 chr2 156754710 156754872 -93932982 - MER76 LTR ERV -513 175 5 2838 236 35 57 chr2 156755077 156756000 -93931854 + L1MC4a LINE L1 5376 6277 -1531 697 195 13 119 chr2 156756210 156756446 -93931408 + MER20 DNA MER1_type 4 214 -5 1742 154 11 0 chr2 156757308 156757612 -93930242 - AluY SINE Alu 0 307 1 336 102 0 0 chr2 156757880 156757929 -93929925 + (TA)n Simple_repeat Simple_repeat 2 50 0 1756 55 38 0 chr2 156757930 156758165 -93929689 - L1PA7 LINE L1 -14 6140 5897 387 311 57 34 chr2 156758270 156758447 -93929407 - MIR SINE MIR 0 262 82 349 259 218 7 chr2 156758713 156758860 -93928994 + MIR SINE MIR 29 206 -56 183 156 0 0 chr2 156758916 156758948 -93928906 + (TTA)n Simple_repeat Simple_repeat 2 33 0 67 49 0 0 chr2 156759748 156759850 -93928004 + AT_rich Low_complexity Low_complexity 1 102 0 6241 214 24 32 chr2 156760182 156760369 -93927485 - L1M2 LINE L1 -4296 2553 2366 5203 123 15 29 chr2 156760369 156761240 -93926614 - L1MA2 LINE L1 0 6304 5446 6241 214 24 32 chr2 156761240 156762539 -93925315 - L1M2 LINE L1 -4483 2366 1078 21 36 0 0 chr2 156763978 156764006 -93923848 + AT_rich Low_complexity Low_complexity 1 28 0 234 279 57 0 chr2 156764022 156764144 -93923710 + L1ME1 LINE L1 3321 3449 -2697 1644 190 33 49 chr2 156764218 156764608 -93923246 + Tigger7 DNA MER2_type 2204 2587 0 1373 259 33 15 chr2 156764609 156765007 -93922847 + L1ME1 LINE L1 5680 6084 -82 * 1960 226 60 34 chr2 156765003 156765659 -93922195 - L1 LINE L1 -1994 4152 3480 475 268 35 0 chr2 156765630 156765772 -93922082 - L1M4c LINE L1 -4920 1464 1318 * 287 232 11 42 chr2 156765772 156765867 -93921987 + (TATATG)n Simple_repeat Simple_repeat 2 93 0 670 249 23 32 chr2 156765889 156766110 -93921744 - L1M4c LINE L1 -5091 1293 1075 328 241 0 0 chr2 156766114 156766193 -93921661 + L1ME3A LINE L1 5872 5950 -220 24 53 0 0 chr2 156766404 156766442 -93921412 + AT_rich Low_complexity Low_complexity 1 38 0 315 307 44 36 chr2 156768207 156768344 -93919510 - MIR SINE MIR -111 151 14 181 263 20 0 chr2 156768597 156768696 -93919158 + GA-rich Low_complexity Low_complexity 4 104 0 199 306 0 0 chr2 156770412 156770461 -93917393 + MIR SINE MIR 109 157 -105 210 234 0 31 chr2 156770466 156770530 -93917324 + T-rich Low_complexity Low_complexity 3 64 0 4842 246 53 24 chr2 156772074 156773465 -93914389 + L1M1 LINE L1 1879 3228 -4337 285 51 0 0 chr2 156773465 156773504 -93914350 + (TG)n Simple_repeat Simple_repeat 2 40 0 4842 246 53 24 chr2 156773504 156774609 -93913245 + L1M1 LINE L1 3228 4456 -3109 2032 134 3 0 chr2 156774609 156774915 -93912939 + AluSx SINE Alu 1 307 -5 4842 246 53 24 chr2 156774915 156774955 -93912899 + L1M1 LINE L1 4456 4493 -3072 8709 184 39 14 chr2 156775373 156777296 -93910558 + L1M1 LINE L1 4492 6463 -1102 6284 92 33 0 chr2 156778065 156779060 -93908794 - L1PA10 LINE L1 -3 6165 5156 219 323 16 0 chr2 156779544 156779606 -93908248 - L2 LINE L2 -5 3267 3205 20463 172 30 9 chr2 156779742 156782717 -93905137 - L1MA3 LINE L1 0 7724 4812 2364 81 3 0 chr2 156782717 156783015 -93904839 - AluSp SINE Alu -14 299 1 20463 172 30 9 chr2 156783015 156787091 -93900763 - L1MA3 LINE L1 -2912 4812 500 1797 133 58 20 chr2 156787091 156787384 -93900470 - AluSx SINE Alu -8 304 1 20463 172 30 9 chr2 156787384 156787870 -93899984 - L1MA3 LINE L1 -7224 500 26 2242 123 0 0 chr2 156788283 156788593 -93899261 - AluSx SINE Alu 0 312 3 21 36 0 0 chr2 156789679 156789707 -93898147 + AT_rich Low_complexity Low_complexity 1 28 0 29 0 0 62 chr2 156792199 156792247 -93895607 + AT_rich Low_complexity Low_complexity 1 45 0 235 343 38 19 chr2 156792375 156792480 -93895374 - MIR SINE MIR -151 111 5 14957 162 37 7 chr2 156792938 156795691 -93892163 + L1M4 LINE L1 901 3737 -3828 946 126 103 0 chr2 156795692 156795866 -93891988 + L1MA2 LINE L1 6112 6303 -1 349 239 39 52 chr2 156795918 156796073 -93891781 + L1M4 LINE L1 4626 4778 -2787 12378 86 23 4 chr2 156796078 156798393 -93889461 - L1PA7 LINE L1 -259 5895 3558 1699 68 0 5 chr2 156798393 156798640 -93889214 + L1PA7 LINE L1 5919 6166 0 265 221 65 0 chr2 156798723 156798800 -93889054 + L1ME3A LINE L1 6084 6165 -5 754 292 79 50 chr2 156798815 156799792 -93888062 + L1ME3A LINE L1 4326 5330 -816 349 43 0 0 chr2 156799846 156799893 -93887961 - MADE1 DNA Mariner -33 47 1 428 327 85 24 chr2 156799924 156800337 -93887517 + L1ME3A LINE L1 5410 5847 -323 1079 281 62 9 chr2 156801113 156801547 -93886307 + L1M4 LINE L1 6296 6752 -813 782 170 19 6 chr2 156801568 156801727 -93886127 + L1MD1 LINE L1 6072 6232 -10 520 231 16 33 chr2 156801742 156801863 -93885991 + FLAM_A SINE Alu 12 130 -12 189 224 90 30 chr2 156802121 156802188 -93885666 - MIR3 SINE MIR -26 182 112 679 232 11 10 chr2 156802190 156802392 -93885462 - MER5A DNA MER1_type -7 182 2 28 0 0 0 chr2 156802495 156802523 -93885331 + AT_rich Low_complexity Low_complexity 1 28 0 227 265 48 12 chr2 156804061 156804144 -93883710 - L1ME LINE L1 -460 5661 5576 1904 149 40 0 chr2 156804174 156804470 -93883384 - AluSx SINE Alu -4 308 1 414 319 42 33 chr2 156804478 156804719 -93883135 - ERVL LTR ERVL -1039 3957 3715 1630 327 71 61 chr2 156804956 156805907 -93881947 - ERVL LTR ERVL -1595 3694 2754 1283 198 34 58 chr2 156805907 156806200 -93881654 + AluJo SINE Alu 2 287 -25 1630 327 71 61 chr2 156806200 156806241 -93881613 - ERVL LTR ERVL -2535 2754 2715 426 79 0 0 chr2 156806241 156806304 -93881550 + (CATA)n Simple_repeat Simple_repeat 2 64 0 1630 327 71 61 chr2 156806304 156806805 -93881049 - ERVL LTR ERVL -2574 2715 2214 261 242 39 110 chr2 156806826 156806912 -93880942 - MER110-int LTR ERV1 -540 4107 4036 2138 115 3 0 chr2 156806912 156807220 -93880634 + AluSp SINE Alu 1 309 0 261 242 39 110 chr2 156807220 156807312 -93880542 - MER110-int LTR ERV1 -611 4036 3939 270 0 0 0 chr2 156807374 156807404 -93880450 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 901 276 5 5 chr2 156807840 156808061 -93879793 - MER58A DNA MER1_type -2 222 2 29 0 0 0 chr2 156808459 156808488 -93879366 + AT_rich Low_complexity Low_complexity 1 29 0 465 321 64 55 chr2 156809091 156809452 -93878402 - LTR16C LTR ERVL -39 452 89 2798 202 31 16 chr2 156809770 156810060 -93877794 - MER90 LTR ERV1 0 614 330 2055 115 0 20 chr2 156810060 156810356 -93877498 - AluSc SINE Alu -19 290 1 2798 202 31 16 chr2 156810356 156810670 -93877184 - MER90 LTR ERV1 -284 330 1 2461 121 8 11 chr2 156810767 156811140 -93876714 + THE1C LTR MaLR 1 372 -3 29 28 0 0 chr2 156811279 156811315 -93876539 + AT_rich Low_complexity Low_complexity 1 36 0 26 64 0 0 chr2 156811695 156811742 -93876112 + AT_rich Low_complexity Low_complexity 1 47 0 24 77 0 0 chr2 156813435 156813487 -93874367 + AT_rich Low_complexity Low_complexity 1 52 0 22 94 0 0 chr2 156813635 156813699 -93874155 + AT_rich Low_complexity Low_complexity 1 64 0 925 242 59 108 chr2 156813792 156814247 -93873607 - MLT1H LTR MaLR -113 436 4 261 309 60 0 chr2 156814276 156814360 -93873494 + L2 LINE L2 3225 3313 0 26 0 0 0 chr2 156814768 156814794 -93873060 + AT_rich Low_complexity Low_complexity 1 26 0 26 0 0 0 chr2 156815605 156815631 -93872223 + AT_rich Low_complexity Low_complexity 1 26 0 307 95 0 60 chr2 156820019 156820103 -93867751 + (TTATA)n Simple_repeat Simple_repeat 5 83 0 1352 262 83 9 chr2 156820134 156820566 -93867288 + L1ME1 LINE L1 5455 5918 -248 1354 260 63 85 chr2 156820708 156821547 -93866307 + L1MC5 LINE L1 6710 7530 -431 21 57 0 0 chr2 156821896 156821931 -93865923 + AT_rich Low_complexity Low_complexity 1 35 0 453 244 167 0 chr2 156822447 156822615 -93865239 + MER5C DNA MER1_type 129 324 0 444 101 0 0 chr2 156822956 156823025 -93864829 - L1PA13 LINE L1 -2 6161 6093 731 254 110 108 chr2 156823703 156824302 -93863552 - L1ME3 LINE L1 -230 5932 5333 230 357 19 45 chr2 156824313 156824470 -93863384 - L2 LINE L2 -905 2409 2257 291 196 80 27 chr2 156825902 156826014 -93861840 - Charlie7 DNA MER1_type -2451 161 44 330 383 25 0 chr2 156827440 156827675 -93860179 + L2 LINE L2 2380 2620 -694 441 352 46 29 chr2 156828682 156828963 -93858891 + MLT1J LTR MaLR 79 364 -147 22 70 0 0 chr2 156828990 156829033 -93858821 + AT_rich Low_complexity Low_complexity 1 43 0 193 320 21 21 chr2 156829094 156829191 -93858663 + L2 LINE L2 2619 2715 -599 728 228 60 9 chr2 156829191 156829406 -93858448 + L1MCc LINE L1 17 242 -6181 1066 213 114 47 chr2 156829704 156830126 -93857728 + L1MCc LINE L1 1087 1536 -4887 258 394 45 15 chr2 156830879 156831143 -93856711 - LTR16C LTR ERVL -146 345 74 180 0 0 0 chr2 156831384 156831404 -93856450 + (CA)n Simple_repeat Simple_repeat 2 21 0 1728 181 0 3 chr2 156831479 156831771 -93856083 + AluJb SINE Alu 5 295 -17 5087 194 26 11 chr2 156832854 156834775 -93853079 + L1PA16 LINE L1 4204 6157 -9 697 251 10 15 chr2 156835215 156835410 -93852444 + L1MCc LINE L1 2279 2472 -4650 441 267 60 44 chr2 156835429 156835744 -93852110 + L1MCc LINE L1 3600 3919 -3022 739 105 0 0 chr2 156835745 156835850 -93852004 + U6 snRNA snRNA 1 105 -2 2697 209 10 3 chr2 156835860 156836439 -93851415 + L1P LINE L1 1259 1841 -4305 2233 39 0 52 chr2 156836439 156836744 -93851110 - L1PA4 LINE L1 0 6155 5867 246 32 0 0 chr2 156836744 156836775 -93851079 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1264 92 0 0 chr2 156836775 156836939 -93850915 - AluY SINE Alu -29 282 119 1345 192 50 3 chr2 156836944 156837241 -93850613 - AluY SINE Alu 0 311 1 230 299 31 21 chr2 156837243 156837340 -93850514 - L1P LINE L1 -1692 4454 4357 207 0 0 0 chr2 156837520 156837543 -93850311 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 779 224 0 0 chr2 156837543 156837707 -93850147 - AluY SINE Alu -29 282 119 2312 54 51 0 chr2 156837712 156838008 -93849846 - AluY SINE Alu 0 311 1 4730 206 21 3 chr2 156838010 156839025 -93848829 - L1P LINE L1 -1692 4454 3422 1710 112 15 38 chr2 156839045 156839312 -93848542 - AluSx SINE Alu -48 264 4 1115 273 16 0 chr2 156839315 156839680 -93848174 - L1P LINE L1 -3104 3042 2661 1901 135 0 0 chr2 156839799 156840065 -93847789 + AluSq SINE Alu 1 266 -47 1258 53 12 0 chr2 156840081 156840252 -93847602 + (GAAA)n Simple_repeat Simple_repeat 2 174 0 716 382 26 19 chr2 156840644 156841068 -93846786 + LTR16A LTR ERVL 18 444 -6 1518 307 57 36 chr2 156841073 156842209 -93845645 + HERV16 LTR ERVL 1 1178 -3818 2596 319 74 53 chr2 156842920 156843251 -93844603 + HERV16 LTR ERVL 1789 2111 -3487 1221 207 10 67 chr2 156843251 156843551 -93844303 - AluJo SINE Alu -27 285 3 2596 319 74 53 chr2 156843551 156845073 -93842781 + HERV16 LTR ERVL 2111 3697 -1901 585 375 46 22 chr2 156845487 156846079 -93841775 + HERV16 LTR ERVL 4508 5113 -651 2319 91 3 0 chr2 156846114 156846422 -93841432 - AluY SINE Alu -2 309 1 2081 180 0 30 chr2 156846813 156847208 -93840646 - MLT1B LTR MaLR -7 383 1 404 345 43 59 chr2 156847275 156847579 -93840275 + LTR16A LTR ERVL 105 403 -47 925 278 48 75 chr2 156847676 156848212 -93839642 - L1ME3A LINE L1 -213 5957 5436 616 306 95 28 chr2 156848226 156848838 -93839016 - L1ME3A LINE L1 -788 5358 4706 293 281 30 43 chr2 156848970 156849134 -93838720 + L1MEd LINE L1 11 172 -5947 24 0 0 0 chr2 156849334 156849358 -93838496 + AT_rich Low_complexity Low_complexity 1 24 0 1938 138 24 53 chr2 156849560 156849938 -93837916 + MER4E LTR ERV1 1 367 -399 1000 57 0 0 chr2 156849931 156850053 -93837801 + MER4E LTR ERV1 645 766 0 * 23 33 0 0 chr2 156850069 156850099 -93837755 + AT_rich Low_complexity Low_complexity 1 30 0 1221 167 12 56 chr2 156850114 156850267 -93837587 - Tigger5 DNA MER2_type 0 2323 2184 2038 136 0 13 chr2 156850267 156850577 -93837277 + AluSx SINE Alu 3 308 -4 1221 167 12 56 chr2 156850577 156850675 -93837179 - Tigger5 DNA MER2_type -139 2184 2083 1128 232 9 9 chr2 156850666 156850899 -93836955 - Tigger5 DNA MER2_type -2090 233 1 * 415 279 58 47 chr2 156850958 156851302 -93836552 - L1M4 LINE L1 -798 5348 5001 * 743 261 131 17 chr2 156851296 156851893 -93835961 - L1MEc LINE L1 -2726 3489 2825 29054 125 9 31 chr2 156851898 156858137 -93829717 - L1PA8 LINE L1 -7 6480 264 5096 209 20 8 chr2 156858252 156859428 -93828426 - L1P LINE L1 -3095 3051 1861 1829 129 54 4 chr2 156859532 156859810 -93828044 - L1PA8 LINE L1 -6164 297 6 829 283 50 22 chr2 156859814 156860277 -93827577 - L1MEc LINE L1 -3388 2827 2352 1627 192 21 26 chr2 156860280 156860619 -93827235 + MER44D DNA MER2_type 3 609 0 249 281 143 19 chr2 156860681 156860891 -93826963 - L1MEc LINE L1 -4083 2313 2078 271 263 90 23 chr2 156860912 156861045 -93826809 - L1MEc LINE L1 -4389 2007 1866 6106 184 66 47 chr2 156861090 156862548 -93825306 + L1MCa LINE L1 34 1519 -4907 4477 244 42 14 chr2 156862549 156864168 -93823686 - L1PBb LINE L1 -3753 3096 1336 332 284 0 0 chr2 156864158 156864246 -93823608 - L1PBb LINE L1 -5290 1559 1472 * 271 362 7 0 chr2 156864261 156864413 -93823441 - L1PBb LINE L1 -5301 1548 1396 567 276 50 15 chr2 156865394 156865593 -93822261 - L1PBb LINE L1 -6642 208 3 536 153 0 64 chr2 156865653 156865822 -93822032 - L1M4c LINE L1 -3826 2575 2398 * 676 173 0 6 chr2 156865820 156865985 -93821869 - L1M4c LINE L1 -4250 2134 1856 * 4962 181 64 48 chr2 156865984 156867180 -93820674 - L1M4c LINE L1 -5166 1218 3 237 281 128 52 chr2 156867239 156867488 -93820366 - L1MDa LINE L1 -4706 1509 1242 765 303 71 58 chr2 156867600 156868053 -93819801 - L1MDa LINE L1 -5259 1137 691 2232 31 4 0 chr2 156868053 156868313 -93819541 - AluY SINE Alu -15 296 36 765 303 71 58 chr2 156868313 156868869 -93818985 - L1MDa LINE L1 -5705 691 115 433 329 68 60 chr2 156869704 156870303 -93817551 - L1M4 LINE L1 -926 5220 4617 327 293 44 84 chr2 156870367 156870616 -93817238 + L1ME2 LINE L1 2475 2713 -3433 414 302 64 87 chr2 156870778 156871136 -93816718 + L1ME2 LINE L1 5258 5607 -555 3968 164 29 7 chr2 156871147 156871843 -93816011 + MER50 LTR ERV1 1 711 -23 291 91 23 0 chr2 156871897 156871941 -93815913 - MER50 LTR ERV1 -25 709 665 2226 165 27 22 chr2 156872314 156872715 -93815139 - MER50 LTR ERV1 -331 403 1 368 288 28 75 chr2 156872732 156872767 -93815087 + L1ME2 LINE L1 5665 5700 -464 1960 154 3 10 chr2 156872767 156873079 -93814775 + AluSx SINE Alu 1 310 -2 368 288 28 75 chr2 156873079 156873255 -93814599 + L1ME2 LINE L1 5700 5866 -298 21 0 0 0 chr2 156873821 156873842 -93814012 + AT_rich Low_complexity Low_complexity 1 21 0 220 150 67 0 chr2 156875121 156875181 -93812673 + (TA)n Simple_repeat Simple_repeat 2 65 0 392 244 46 46 chr2 156876876 156877007 -93810847 + MER91B DNA MER1_type 31 161 -29 26 0 0 0 chr2 156877683 156877709 -93810145 + AT_rich Low_complexity Low_complexity 1 26 0 405 0 0 0 chr2 156877840 156877885 -93809969 + (TG)n Simple_repeat Simple_repeat 2 46 0 26 74 0 0 chr2 156878608 156878662 -93809192 + AT_rich Low_complexity Low_complexity 1 54 0 361 215 75 0 chr2 156879611 156879704 -93808150 + L1MC3 LINE L1 7680 7779 -6 255 133 0 0 chr2 156880381 156880426 -93807428 + (A)n Simple_repeat Simple_repeat 1 45 0 25 51 0 0 chr2 156881808 156881847 -93806007 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr2 156882942 156882970 -93804884 + AT_rich Low_complexity Low_complexity 1 28 0 24 85 0 0 chr2 156883120 156883179 -93804675 + AT_rich Low_complexity Low_complexity 1 59 0 262 380 42 48 chr2 156884341 156884507 -93803347 - MIR3 SINE MIR -25 183 19 24 32 0 0 chr2 156887756 156887787 -93800067 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 156887845 156887873 -93799981 + AT_rich Low_complexity Low_complexity 1 28 0 248 279 39 19 chr2 156888483 156888587 -93799267 + MIR SINE MIR 59 164 -98 292 269 25 0 chr2 156888931 156889050 -93798804 + (TA)n Simple_repeat Simple_repeat 2 123 0 495 337 44 20 chr2 156890163 156890415 -93797439 - MIR SINE MIR 0 262 5 183 391 0 0 chr2 156892378 156892465 -93795389 + MER5B DNA MER1_type 46 132 -46 1096 300 140 17 chr2 156895163 156895987 -93791867 + L2 LINE L2 2378 3311 -2 371 222 86 34 chr2 156896060 156896199 -93791655 - MIR SINE MIR -44 218 70 244 332 161 47 chr2 156896290 156896823 -93791031 - L2 LINE L2 -92 3221 2638 326 301 37 42 chr2 156897588 156897804 -93790050 - ERVL LTR ERVL -2883 2881 2667 524 295 75 43 chr2 156897842 156898147 -93789707 - ERVL LTR ERVL -3462 2302 1988 25 51 0 0 chr2 156898725 156898764 -93789090 + AT_rich Low_complexity Low_complexity 1 39 0 679 218 0 0 chr2 156898953 156899077 -93788777 + FLAM_A SINE Alu 8 131 -11 283 241 184 0 chr2 156900225 156900312 -93787542 - L3 LINE CR1 -431 1146 1044 213 308 0 0 chr2 156900326 156900378 -93787476 - L2 LINE L2 -11 3261 3210 903 104 0 7 chr2 156900556 156900700 -93787154 - L1MA5 LINE L1 0 6300 6158 21 57 0 0 chr2 156901611 156901646 -93786208 + AT_rich Low_complexity Low_complexity 1 35 0 342 326 68 30 chr2 156902570 156902702 -93785152 - L2 LINE L2 -2 3270 3134 322 271 152 20 chr2 156903524 156903675 -93784179 + MLT1I LTR MaLR 228 398 -11 32 0 0 0 chr2 156903871 156903903 -93783951 + AT_rich Low_complexity Low_complexity 1 32 0 30 59 0 0 chr2 156904119 156904170 -93783684 + AT_rich Low_complexity Low_complexity 1 51 0 2107 102 3 7 chr2 156904754 156905049 -93782805 + AluSg SINE Alu 3 296 -14 1256 273 110 29 chr2 156905234 156905681 -93782173 - MER77 LTR ERV1 -4 601 119 246 81 0 0 chr2 156906015 156906052 -93781802 + (TG)n Simple_repeat Simple_repeat 2 38 0 217 246 33 0 chr2 156906942 156907003 -93780851 + CT-rich Low_complexity Low_complexity 3 65 0 212 163 0 0 chr2 156907197 156907240 -93780614 + (TA)n Simple_repeat Simple_repeat 2 44 0 1510 216 0 0 chr2 156907242 156907534 -93780320 - AluJo SINE Alu -20 292 1 2520 139 11 39 chr2 156909726 156910166 -93777688 + MSTC LTR MaLR 1 428 0 29 0 0 0 chr2 156910167 156910196 -93777658 + AT_rich Low_complexity Low_complexity 1 29 0 348 274 19 28 chr2 156910684 156910790 -93777064 + MLT1J LTR MaLR 350 454 -57 286 209 86 103 chr2 156910870 156911104 -93776750 + L1MC5 LINE L1 7696 7925 -36 243 0 0 0 chr2 156911195 156911222 -93776632 + (GA)n Simple_repeat Simple_repeat 2 28 0 496 287 166 17 chr2 156911266 156911555 -93776299 + HAL1 LINE L1 1484 1815 -692 2133 133 71 0 chr2 156911768 156912120 -93775734 + MER51B LTR ERV1 1 377 0 3851 116 21 16 chr2 156912120 156912236 -93775618 + MER51B-int LTR ERV1 1 115 -7701 3273 119 22 6 chr2 156912236 156912733 -93775121 + LTR10B LTR ERV1 1 505 0 3851 116 21 16 chr2 156912733 156913222 -93774632 + MER51B-int LTR ERV1 115 609 -7207 * 4768 143 19 4 chr2 156913221 156914014 -93773840 + MER51B-int LTR ERV1 691 1495 -6321 584 170 38 119 chr2 156914120 156914279 -93773575 + MER4A LTR ERV1 372 517 -147 2020 115 19 29 chr2 156914291 156914603 -93773251 + AluSx SINE Alu 1 309 -3 7926 103 105 6 chr2 156914603 156915975 -93771879 + MER51B-int LTR ERV1 1804 3315 -4501 1864 154 50 15 chr2 156915959 156916420 -93771434 + MER51B-int LTR ERV1 1474 1917 -4029 * 219 36 0 0 chr2 156916420 156916448 -93771406 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1593 128 27 33 chr2 156916448 156916869 -93770985 + MER51B-int LTR ERV1 2210 4453 -1878 513 121 110 0 chr2 156916868 156916959 -93770895 + MER51B-int LTR ERV1 5249 5349 -2188 * 8197 146 74 57 chr2 156916949 156918882 -93768972 + MER51B-int LTR ERV1 5620 7813 -3 2289 126 56 0 chr2 156918888 156919244 -93768610 + MER51B LTR ERV1 2 377 0 237 268 21 0 chr2 156919600 156919697 -93768157 + L1MC4 LINE L1 6605 6703 -1339 239 164 36 0 chr2 156919698 156919753 -93768101 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 619 216 141 30 chr2 156919853 156920084 -93767770 - L1 LINE L1 -2177 3969 3713 842 272 23 33 chr2 156920094 156920488 -93767366 - L1 LINE L1 -2496 3650 3261 2091 122 7 0 chr2 156921701 156922005 -93765849 - AluSp SINE Alu -7 306 1 1951 102 3 65 chr2 156923443 156923765 -93764089 + AluSg SINE Alu 1 302 -8 312 286 0 22 chr2 156924105 156924196 -93763658 + L1MC4 LINE L1 6615 6703 -1339 317 269 0 43 chr2 156924223 156924316 -93763538 + L1MC4 LINE L1 6615 6703 -1339 323 333 0 6 chr2 156924317 156924476 -93763378 + (TA)n Simple_repeat Simple_repeat 1 158 0 1861 162 0 6 chr2 156925208 156925522 -93762332 + AluSx SINE Alu 1 312 0 897 236 19 24 chr2 156925988 156926200 -93761654 - MER58A DNA MER1_type -3 221 11 466 286 143 0 chr2 156926216 156926377 -93761477 - MLT1J2 LTR MaLR -265 185 2 643 162 0 0 chr2 156926552 156926651 -93761203 - AluSg/x SINE Alu -15 297 199 21 57 0 0 chr2 156927952 156927987 -93759867 + AT_rich Low_complexity Low_complexity 1 35 0 2341 201 39 29 chr2 156928527 156929258 -93758596 - LTR27 LTR ERV1 -2 634 3 42166 38 25 1 chr2 156929426 156935204 -93752650 - L1PA3 LINE L1 -240 5915 1 1927 65 8 4 chr2 156935334 156935595 -93752259 + L1PA6 LINE L1 5887 6148 -6 3435 182 29 2 chr2 156936971 156937782 -93750072 - L1PA15 LINE L1 0 6174 5302 848 195 0 0 chr2 156937780 156937934 -93749920 + L1MB1 LINE L1 5964 6117 -51 * 290 203 29 0 chr2 156937980 156938049 -93749805 - L1 LINE L1 -873 5273 5203 1206 143 5 13 chr2 156938050 156938274 -93749580 + L1 LINE L1 4980 5201 -945 19125 45 4 2 chr2 156939341 156942507 -93745347 + L1PA5 LINE L1 2983 6154 0 674 229 80 11 chr2 156943326 156943514 -93744340 - MIR SINE MIR -56 206 6 21 0 0 0 chr2 156945159 156945180 -93742674 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr2 156945206 156945249 -93742605 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 156945344 156945365 -93742489 + AT_rich Low_complexity Low_complexity 1 21 0 246 188 0 0 chr2 156945529 156945577 -93742277 + MIR SINE MIR 69 116 -92 21 0 0 0 chr2 156945669 156945690 -93742164 + AT_rich Low_complexity Low_complexity 1 21 0 234 271 0 0 chr2 156946212 156946352 -93741502 + GA-rich Low_complexity Low_complexity 1 140 0 442 292 16 70 chr2 156947080 156947265 -93740589 + MIR3 SINE MIR 32 206 -2 186 267 23 105 chr2 156951571 156951657 -93736197 + MIR SINE MIR 52 130 -78 195 42 0 0 chr2 156952192 156952216 -93735638 + (T)n Simple_repeat Simple_repeat 1 24 0 1363 231 7 7 chr2 156953782 156954068 -93733786 - AluJo SINE Alu -24 288 3 623 159 15 61 chr2 156954627 156954759 -93733095 + LTR52 LTR ERVL 3 128 -293 280 343 50 0 chr2 156954759 156954858 -93732996 - MIR SINE MIR -152 110 7 418 203 17 0 chr2 156955765 156955883 -93731971 + CT-rich Low_complexity Low_complexity 4 123 0 197 214 0 83 chr2 156956340 156956424 -93731430 - L2 LINE L2 -1650 1664 1588 330 232 152 0 chr2 156956810 156956909 -93730945 + L2 LINE L2 1329 1442 -1872 2115 133 0 0 chr2 156957257 156957558 -93730296 + AluSx SINE Alu 3 303 -9 303 300 0 11 chr2 156957911 156958001 -93729853 + MER58B DNA MER1_type 1 89 -252 535 252 0 0 chr2 156958022 156958137 -93729717 + FLAM_A SINE Alu 10 124 -18 985 226 67 4 chr2 156958137 156958376 -93729478 + MER58B DNA MER1_type 87 340 -1 1957 146 140 8 chr2 156958510 156958888 -93728966 + MSTA LTR MaLR 1 428 0 22 56 0 0 chr2 156959344 156959380 -93728474 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr2 156959840 156959870 -93727984 + AT_rich Low_complexity Low_complexity 1 30 0 874 229 0 0 chr2 156959873 156960048 -93727806 + FRAM SINE Alu 1 175 -1 2323 143 3 3 chr2 156961331 156961695 -93726159 + THE1B LTR MaLR 1 364 0 260 233 54 70 chr2 156962039 156962168 -93725686 + L1ME LINE L1 5708 5824 -297 7187 10 0 0 chr2 156962411 156963224 -93724630 - L1PA2 LINE L1 0 6155 5343 2864 46 8 0 chr2 156963224 156963597 -93724257 + L1PA2 LINE L1 4984 5359 -787 270 296 55 80 chr2 156963664 156963863 -93723991 - LTR67 LTR ERVL -174 383 190 2015 286 28 2 chr2 156964629 156965231 -93722623 - L1PA13 LINE L1 -4801 1986 1369 4887 245 36 42 chr2 156965482 156967347 -93720507 + L1PA12 LINE L1 2794 4630 -2954 2043 108 31 0 chr2 156967348 156967636 -93720218 + AluSg SINE Alu 1 297 -13 2358 167 24 4 chr2 156968044 156968494 -93719360 - L1MA8 LINE L1 -71 6220 5762 812 179 0 0 chr2 156968509 156968649 -93719205 + L1MA8 LINE L1 5601 5740 -560 * 2082 205 124 0 chr2 156968648 156969190 -93718664 - L1MA8 LINE L1 -1206 4940 4332 234 239 15 15 chr2 156969592 156969659 -93718195 + AluS SINE Alu 225 291 -9 2174 168 48 60 chr2 156969669 156970170 -93717684 + L1MC1 LINE L1 5839 6333 0 710 297 103 15 chr2 156970185 156970538 -93717316 + L2 LINE L2 2720 3110 -162 200 357 0 29 chr2 156970557 156970627 -93717227 - L2 LINE L2 -370 2944 2877 235 248 38 29 chr2 156970643 156970748 -93717106 + HAL1b LINE L1 1235 1340 -8 21 36 0 0 chr2 156971461 156971489 -93716365 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 156971895 156971931 -93715923 + AT_rich Low_complexity Low_complexity 1 36 0 1537 192 50 52 chr2 156972505 156972869 -93714985 + MLT1A2 LTR MaLR 1 363 -11 757 329 126 26 chr2 156972888 156973289 -93714565 - L2 LINE L2 -154 3159 2677 1950 152 0 0 chr2 156973289 156973598 -93714256 - AluSg SINE Alu -1 309 1 757 329 126 26 chr2 156973598 156973781 -93714073 - L2 LINE L2 -636 2677 2514 332 251 68 47 chr2 156973933 156974124 -93713730 + L2 LINE L2 3009 3203 -110 185 320 0 0 chr2 156974569 156974619 -93713235 - L2 LINE L2 -80 3233 3184 484 233 110 0 chr2 156974631 156974794 -93713060 - L1MCc LINE L1 -1572 5369 5189 5451 116 0 0 chr2 156974796 156975788 -93712066 - L1PA13 LINE L1 -4 6159 5175 9463 178 19 10 chr2 156975797 156977612 -93710242 - L1PA13 LINE L1 -1032 5114 3284 1534 254 27 66 chr2 156977593 156978371 -93709483 - L1MCc LINE L1 -2366 4575 3828 * 234 205 54 18 chr2 156978401 156978513 -93709341 + (TA)n Simple_repeat Simple_repeat 1 116 0 1818 281 90 29 chr2 156978543 156979979 -93707875 - L1MCc LINE L1 -3143 3798 2305 966 314 80 20 chr2 156980454 156981246 -93706608 - L1MCc LINE L1 -4892 1531 971 332 231 102 114 chr2 156981541 156981805 -93706049 - L1MDa LINE L1 -4726 1814 1554 278 224 82 10 chr2 156982146 156982244 -93705610 + HsTC2 DNA Tc2 3 107 -1791 233 65 0 0 chr2 156982432 156982463 -93705391 - THE1-int LTR MaLR -1228 352 322 24 0 0 0 chr2 156982620 156982644 -93705210 + AT_rich Low_complexity Low_complexity 1 24 0 708 325 75 17 chr2 156982804 156983152 -93704702 + MLT1J LTR MaLR 39 406 -105 281 261 14 94 chr2 156983233 156983264 -93704590 + MIR SINE MIR 128 160 -102 2502 117 3 8 chr2 156983264 156983639 -93704215 + THE1C LTR MaLR 1 373 -2 9035 115 50 46 chr2 156983641 156984049 -93703805 + THE1C-int LTR MaLR 1 406 -1174 2065 90 0 8 chr2 156984049 156984317 -93703537 - AluY SINE Alu -45 266 1 9035 115 50 46 chr2 156984317 156985481 -93702373 + THE1C-int LTR MaLR 406 1580 0 2498 110 8 29 chr2 156985481 156985864 -93701990 + THE1C LTR MaLR 1 375 0 281 261 14 94 chr2 156985864 156985966 -93701888 + MIR SINE MIR 159 254 -8 32 0 0 0 chr2 156988152 156988184 -93699670 + AT_rich Low_complexity Low_complexity 1 32 0 200 213 16 0 chr2 156988567 156988628 -93699226 + CT-rich Low_complexity Low_complexity 4 65 0 22 70 0 0 chr2 156989154 156989197 -93698657 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr2 156991336 156991357 -93696497 + AT_rich Low_complexity Low_complexity 1 21 0 471 297 37 81 chr2 156992606 156992902 -93694952 - MLT1J LTR MaLR -228 283 1 25505 50 9 3 chr2 156993839 156996378 -93691476 - L1P LINE L1 -754 5392 2828 2280 105 0 0 chr2 156996378 156996684 -93691170 - AluY SINE Alu -5 306 1 25505 50 9 3 chr2 156996684 156997444 -93690410 - L1P LINE L1 -3318 2828 2074 345 67 0 0 chr2 156997445 156997490 -93690364 - L1P LINE L1 -4030 2116 2072 282 54 0 0 chr2 156997486 156997523 -93690331 + L1P LINE L1 2033 2069 -4077 * 231 313 25 49 chr2 156997561 156997724 -93690130 - L2 LINE L2 -1966 1348 1190 1795 191 73 0 chr2 156997837 156998177 -93689677 + MLT1A1 LTR MaLR 1 365 0 1376 180 35 54 chr2 156998279 156998627 -93689227 - AluJb SINE Alu 0 342 1 469 270 106 4 chr2 156998805 156999042 -93688812 - L1M4 LINE L1 -3129 3017 2757 2191 91 7 3 chr2 156999052 156999350 -93688504 + AluY SINE Alu 1 299 -12 1046 90 35 0 chr2 156999350 156999523 -93688331 + AluY SINE Alu 133 310 0 640 237 154 4 chr2 156999528 156999781 -93688073 - L1M4 LINE L1 -3400 2746 2456 245 155 17 0 chr2 156999796 156999854 -93688000 + (TTA)n Simple_repeat Simple_repeat 1 59 0 615 250 45 0 chr2 157000716 157000892 -93686962 - L1ME3A LINE L1 -30 6140 5957 435 153 10 31 chr2 157001211 157001309 -93686545 - L1MA5 LINE L1 -3 6297 6202 3246 154 42 43 chr2 157001309 157001967 -93685887 + L1MA5 LINE L1 5516 6174 -126 22 70 0 0 chr2 157002071 157002114 -93685740 + AT_rich Low_complexity Low_complexity 1 43 0 25 31 0 0 chr2 157002617 157002649 -93685205 + AT_rich Low_complexity Low_complexity 1 32 0 370 310 60 38 chr2 157002649 157002833 -93685021 - MIR SINE MIR -41 221 34 203 218 36 0 chr2 157003358 157003413 -93684441 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 58 0 0 0 chr2 157003689 157003747 -93684107 + AT_rich Low_complexity Low_complexity 1 58 0 7243 151 28 3 chr2 157003752 157006112 -93681742 - L1MA3 LINE L1 -1 6304 3883 2355 121 3 0 chr2 157006149 157006504 -93681350 - L1PB2 LINE L1 -3 6148 5793 285 75 0 0 chr2 157006504 157006544 -93681310 + (TG)n Simple_repeat Simple_repeat 2 41 0 4903 281 34 69 chr2 157006550 157009241 -93678613 + L1PA12 LINE L1 33 3202 -4382 682 123 0 74 chr2 157009241 157009363 -93678491 + AluJb SINE Alu 38 150 -162 4903 281 34 69 chr2 157009363 157010610 -93677244 + L1PA12 LINE L1 3202 4491 -3093 542 171 91 48 chr2 157010580 157010767 -93677087 + L1 LINE L1 5689 5883 -1701 * 358 198 16 8 chr2 157010740 157010861 -93676993 + L1 LINE L1 4499 4620 -2964 * 340 327 73 64 chr2 157011239 157011569 -93676285 - ERVL LTR ERVL -833 4931 4599 571 333 66 25 chr2 157011661 157011904 -93675950 - ERVL LTR ERVL -1130 4355 4103 234 128 0 0 chr2 157013497 157013536 -93674318 + (CA)n Simple_repeat Simple_repeat 2 40 0 210 118 0 0 chr2 157013587 157013621 -93674233 + (GA)n Simple_repeat Simple_repeat 1 34 0 27 29 0 0 chr2 157014163 157014197 -93673657 + AT_rich Low_complexity Low_complexity 1 34 0 26 0 0 0 chr2 157014281 157014307 -93673547 + AT_rich Low_complexity Low_complexity 1 26 0 4345 249 88 34 chr2 157015025 157016557 -93671297 + L1MEc LINE L1 8 1621 -4921 266 298 50 8 chr2 157016588 157016709 -93671145 + L1MB7 LINE L1 2716 2841 -3803 2876 264 56 29 chr2 157016715 157018584 -93669270 + L1MEc LINE L1 1774 3666 -2978 6132 238 50 16 chr2 157018622 157019533 -93668321 + L1MB7 LINE L1 3779 4657 -2025 204 40 0 0 chr2 157019533 157019558 -93668296 + (CA)n Simple_repeat Simple_repeat 2 26 0 6132 238 50 16 chr2 157019558 157019895 -93667959 + L1MB7 LINE L1 4657 4981 -1701 2220 90 0 7 chr2 157019895 157020195 -93667659 - AluY SINE Alu -13 298 1 6132 238 50 16 chr2 157020195 157021431 -93666423 + L1MB7 LINE L1 4981 6381 -301 2033 100 7 4 chr2 157021431 157021732 -93666122 + AluSp SINE Alu 6 307 0 6132 238 50 16 chr2 157021732 157022026 -93665828 + L1MB7 LINE L1 6381 6663 -19 3532 207 94 130 chr2 157022648 157024469 -93663385 - MER52A LTR ERV1 0 1755 1 579 188 29 58 chr2 157024719 157024857 -93662997 - LTR53 LTR ERVL -3 516 383 1993 96 3 65 chr2 157025751 157026073 -93661781 + AluSg SINE Alu 1 302 -8 435 318 81 14 chr2 157026367 157026590 -93661264 - L3b LINE CR1 -243 1340 1103 1838 183 54 11 chr2 157027762 157027795 -93660059 - MLT1A1 LTR MaLR 0 365 335 1527 160 71 29 chr2 157027795 157028145 -93659709 - MER47A DNA MER2_type 0 366 2 1838 183 54 11 chr2 157028145 157028461 -93659393 - MLT1A1 LTR MaLR -30 335 1 395 256 73 36 chr2 157028461 157028680 -93659174 - LTR37B LTR ERV1 -35 433 207 8892 183 48 8 chr2 157028707 157031649 -93656205 - L1MA5A LINE L1 -2 6295 3238 466 196 11 0 chr2 157031657 157031749 -93656105 - LTR37A LTR ERV1 -222 204 112 1569 201 166 53 chr2 157032721 157032953 -93654901 + MLT1D LTR MaLR 1 205 -300 333 47 0 0 chr2 157032953 157032996 -93654858 + (TG)n Simple_repeat Simple_repeat 1 43 0 303 28 0 0 chr2 157032995 157033031 -93654823 + (GA)n Simple_repeat Simple_repeat 1 36 0 * 1569 201 166 53 chr2 157032996 157033049 -93654805 + MLT1D LTR MaLR 205 251 -254 1067 255 60 58 chr2 157033049 157033586 -93654268 - MER34 LTR ERV1 -4 538 1 1569 201 166 53 chr2 157033586 157033787 -93654067 + MLT1D LTR MaLR 251 504 -1 235 306 112 10 chr2 157033800 157033898 -93653956 - L3 LINE CR1 -118 1459 1352 180 0 0 0 chr2 157034030 157034050 -93653804 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 221 414 61 10 chr2 157034094 157034292 -93653562 + L2 LINE L2 2533 2740 -574 815 229 35 0 chr2 157034381 157034551 -93653303 + MER45A DNA AcHobo 3 178 0 2159 133 0 0 chr2 157034775 157035083 -93652771 - AluSx SINE Alu -4 308 1 216 189 0 0 chr2 157035107 157035144 -93652710 + CT-rich Low_complexity Low_complexity 3 39 0 22 0 0 0 chr2 157036533 157036555 -93651299 + AT_rich Low_complexity Low_complexity 1 22 0 195 346 49 25 chr2 157036720 157036801 -93651053 + MIR SINE MIR 19 101 -107 1727 146 29 0 chr2 157037229 157037549 -93650305 - AluSx SINE Alu 0 328 1 279 0 0 0 chr2 157037549 157037580 -93650274 + (T)n Simple_repeat Simple_repeat 1 31 0 245 128 21 0 chr2 157038792 157038839 -93649015 + CT-rich Low_complexity Low_complexity 2 49 0 5427 251 59 21 chr2 157038854 157040033 -93647821 - L1ME1 LINE L1 -119 6116 4983 988 303 34 65 chr2 157040033 157040568 -93647286 + LTR40a LTR ERVL 1 518 -1 5427 251 59 21 chr2 157040568 157041755 -93646099 - L1ME1 LINE L1 -1252 4983 3617 3259 135 2 4 chr2 157041755 157042275 -93645579 - L1PA13 LINE L1 0 6163 5645 5427 251 59 21 chr2 157042275 157042818 -93645036 - L1ME1 LINE L1 -2618 3617 3096 773 289 89 32 chr2 157042796 157043301 -93644553 - L1ME1 LINE L1 -5336 1060 527 * 2998 151 26 4 chr2 157043354 157043884 -93643970 - L1PA16 LINE L1 -3 6163 5622 478 212 48 48 chr2 157043904 157044050 -93643804 - L1 LINE L1 -1058 5791 5646 9799 240 18 19 chr2 157044116 157046969 -93640885 - L1PA15-16 LINE L1 -1188 5661 2811 441 171 37 0 chr2 157046969 157047051 -93640803 - L1PB3 LINE L1 -204 5950 5866 627 106 4 0 chr2 157047053 157047160 -93640694 - L1PA13 LINE L1 -4700 2097 1979 22 0 0 0 chr2 157047187 157047209 -93640645 + AT_rich Low_complexity Low_complexity 1 22 0 246 219 82 14 chr2 157047423 157047496 -93640358 + L2 LINE L2 1648 1725 -1589 862 280 30 8 chr2 157048190 157048426 -93639428 - MIR SINE MIR -5 257 17 512 300 76 23 chr2 157048791 157049162 -93638692 - MLT1I LTR MaLR 0 409 3 697 324 75 40 chr2 157049302 157049676 -93638178 + MLT1J LTR MaLR 125 511 0 22 70 0 0 chr2 157049686 157049729 -93638125 + AT_rich Low_complexity Low_complexity 1 43 0 248 348 43 7 chr2 157049796 157049934 -93637920 + MIR SINE MIR 34 176 -86 16567 23 0 0 chr2 157049947 157052661 -93635193 - L1PA2 LINE L1 -4 6151 3438 4578 33 0 0 chr2 157052661 157053237 -93634617 + L1PA2 LINE L1 2854 3429 -2717 191 244 22 0 chr2 157053239 157053284 -93634570 + MIR SINE MIR 166 211 -51 452 208 313 14 chr2 157053675 157053819 -93634035 + MER5A DNA MER1_type 2 188 -1 23 33 0 0 chr2 157054697 157054727 -93633127 + AT_rich Low_complexity Low_complexity 1 30 0 229 286 0 22 chr2 157055277 157055368 -93632486 - L1MC4 LINE L1 -1339 6703 6615 22 0 0 0 chr2 157055471 157055493 -93632361 + AT_rich Low_complexity Low_complexity 1 22 0 386 350 60 69 chr2 157055873 157056293 -93631561 - L2 LINE L2 -47 3266 2851 583 306 85 69 chr2 157056836 157057831 -93630023 + L1M4 LINE L1 3803 4813 -1333 1235 88 11 0 chr2 157058885 157059066 -93628788 + L1PA7 LINE L1 5972 6154 0 23 78 0 0 chr2 157059107 157059158 -93628696 + AT_rich Low_complexity Low_complexity 1 51 0 232 192 39 13 chr2 157059256 157059334 -93628520 + (TA)n Simple_repeat Simple_repeat 1 80 0 396 303 74 34 chr2 157060049 157060224 -93627630 - MIR3 SINE MIR -11 197 16 1448 204 77 52 chr2 157061010 157061451 -93626403 - MER31B LTR ERV1 -9 457 6 893 248 157 76 chr2 157062156 157062627 -93625227 - LTR33A LTR ERVL -14 509 1 22 35 0 0 chr2 157063264 157063293 -93624561 + AT_rich Low_complexity Low_complexity 1 29 0 217 368 9 0 chr2 157064291 157064397 -93623457 + CT-rich Low_complexity Low_complexity 4 110 0 6363 218 45 6 chr2 157066407 157068036 -93619818 - L1 LINE L1 -1683 4463 2771 731 258 70 65 chr2 157068039 157068906 -93618948 - L1MCc LINE L1 -4803 2138 1266 953 260 99 36 chr2 157069162 157069524 -93618330 + MSTD LTR MaLR 6 390 -6 226 306 36 0 chr2 157070126 157070237 -93617617 - L1MDa LINE L1 -5131 1409 1295 21 0 0 0 chr2 157070540 157070561 -93617293 + AT_rich Low_complexity Low_complexity 1 21 0 7878 203 17 15 chr2 157070752 157073482 -93614372 + L1PA16 LINE L1 3437 6164 -2 373 244 40 19 chr2 157073500 157073657 -93614197 + L1M4c LINE L1 1582 1846 -4536 220 282 0 47 chr2 157075140 157075225 -93612629 + (TATATG)n Simple_repeat Simple_repeat 4 84 0 21 0 0 0 chr2 157075364 157075385 -93612469 + AT_rich Low_complexity Low_complexity 1 21 0 364 332 107 8 chr2 157075913 157076277 -93611577 + L1M4c LINE L1 3116 3515 -2867 1289 293 68 44 chr2 157076290 157076465 -93611389 - L1M4 LINE L1 -1944 4202 4033 1945 143 10 0 chr2 157076465 157076765 -93611089 - AluSx SINE Alu -9 303 1 1289 293 68 44 chr2 157076765 157077530 -93610324 - L1M4 LINE L1 -2113 4033 3239 370 298 53 76 chr2 157077589 157077851 -93610003 - L1M4 LINE L1 -2988 3158 2903 317 207 17 0 chr2 157078281 157078339 -93609515 + polypyrimidine Low_complexity Low_complexity 2 60 0 521 144 16 24 chr2 157078339 157078464 -93609390 + CT-rich Low_complexity Low_complexity 1 124 0 38 75 0 0 chr2 157078746 157078826 -93609028 + AT_rich Low_complexity Low_complexity 1 80 0 43 85 0 0 chr2 157078964 157079070 -93608784 + AT_rich Low_complexity Low_complexity 1 106 0 303 274 78 46 chr2 157079186 157079339 -93608515 - HAL1b LINE L1 -498 850 693 387 336 96 46 chr2 157079466 157079790 -93608064 - HAL1b LINE L1 -954 394 55 484 224 65 0 chr2 157080493 157080600 -93607254 - MER81 DNA DNA 0 114 1 180 0 0 0 chr2 157081210 157081230 -93606624 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 32 57 0 0 chr2 157083557 157083610 -93604244 + AT_rich Low_complexity Low_complexity 1 53 0 21 71 0 0 chr2 157084284 157084326 -93603528 + AT_rich Low_complexity Low_complexity 1 42 0 26 50 0 0 chr2 157084480 157084520 -93603334 + AT_rich Low_complexity Low_complexity 1 40 0 207 220 0 0 chr2 157086807 157086857 -93600997 + CT-rich Low_complexity Low_complexity 3 52 0 227 182 0 23 chr2 157087384 157087428 -93600426 + GA-rich Low_complexity Low_complexity 3 45 0 23 0 0 0 chr2 157088279 157088302 -93599552 + AT_rich Low_complexity Low_complexity 1 23 0 422 353 64 8 chr2 157088477 157088712 -93599142 - L3 LINE CR1 -160 1417 1170 509 168 36 0 chr2 157088738 157088905 -93598949 + (TATAA)n Simple_repeat Simple_repeat 5 177 0 373 182 20 20 chr2 157088905 157089004 -93598850 + (TTATA)n Simple_repeat Simple_repeat 5 103 0 494 331 71 40 chr2 157089092 157089418 -93598436 - L3 LINE CR1 -609 968 633 183 284 88 20 chr2 157090066 157090168 -93597686 + MIR SINE MIR 84 192 -70 24 0 0 0 chr2 157090986 157091010 -93596844 + AT_rich Low_complexity Low_complexity 1 24 0 34 42 0 0 chr2 157091286 157091334 -93596520 + AT_rich Low_complexity Low_complexity 1 48 0 253 250 13 0 chr2 157091370 157091446 -93596408 - L1ME LINE L1 -302 5819 5743 374 274 59 87 chr2 157091538 157092115 -93595739 - L1ME LINE L1 -1511 4635 4075 244 327 145 0 chr2 157092350 157092509 -93595345 + MLT1I LTR MaLR 80 261 -148 30 27 0 0 chr2 157092783 157092820 -93595034 + AT_rich Low_complexity Low_complexity 1 37 0 342 351 13 20 chr2 157093403 157093554 -93594300 + L2 LINE L2 2839 2988 -325 * 664 273 13 7 chr2 157093551 157093705 -93594149 - MER5B DNA MER1_type -4 174 20 400 280 28 82 chr2 157093852 157094034 -93593820 + MER5B DNA MER1_type 7 178 0 2537 159 4 4 chr2 157094739 157095204 -93592650 - L1P LINE L1 -1280 4866 4402 1401 152 0 0 chr2 157095204 157095428 -93592426 + L1P LINE L1 4889 5112 -1034 2834 190 111 6 chr2 157095666 157096378 -93591476 + L1MA8 LINE L1 4154 4940 -1206 812 179 0 0 chr2 157096377 157096517 -93591337 - L1MA8 LINE L1 -560 5740 5601 * 2494 182 22 4 chr2 157096532 157097031 -93590823 + L1MA8 LINE L1 5762 6269 -22 373 15 60 15 chr2 157097199 157097266 -93590588 + (TA)n Simple_repeat Simple_repeat 1 70 0 25 75 0 0 chr2 157097557 157097610 -93590244 + AT_rich Low_complexity Low_complexity 1 53 0 282 305 113 40 chr2 157097781 157098250 -93589604 + L1ME LINE L1 2463 2965 -3181 317 302 73 21 chr2 157098463 157098655 -93589199 + L1ME LINE L1 3557 3758 -2388 302 296 217 18 chr2 157098785 157099413 -93588441 + L1ME LINE L1 3966 4718 -1428 254 315 25 9 chr2 157099782 157099997 -93587857 + L1ME LINE L1 5265 5482 -688 1332 252 88 27 chr2 157100529 157101007 -93586847 - L1ME1 LINE L1 -11 6155 5653 855 274 62 18 chr2 157101290 157101579 -93586275 - L1MD2 LINE L1 -240 6119 5808 2456 191 55 8 chr2 157101636 157102148 -93585706 - L1MC3 LINE L1 -8 7777 7242 * 3123 257 43 38 chr2 157102145 157103917 -93583937 - L1MD2 LINE L1 -756 5390 4058 * 3744 175 12 4 chr2 157103914 157104638 -93583216 + L1 LINE L1 3673 4402 -1744 586 256 87 35 chr2 157104665 157105151 -93582703 - L1ME1 LINE L1 -578 5584 5079 4331 250 88 34 chr2 157106531 157108063 -93579791 + L1M4c LINE L1 8 1621 -4921 266 298 50 8 chr2 157108094 157108215 -93579639 + L1M4 LINE L1 2716 2841 -3803 * 1460 268 53 2 chr2 157108212 157108683 -93579171 + L1M4c LINE L1 1617 2111 -4535 2748 259 54 34 chr2 157108767 157110089 -93577765 + L1M4c LINE L1 2351 3666 -2978 3481 262 75 8 chr2 157110127 157111038 -93576816 + L1M4c LINE L1 3779 4798 -1846 204 40 0 0 chr2 157111038 157111063 -93576791 + (CA)n Simple_repeat Simple_repeat 2 26 0 3481 262 75 8 chr2 157111063 157111397 -93576457 + L1M4c LINE L1 4798 5108 -1536 2015 90 0 62 chr2 157111400 157111721 -93576133 - AluY SINE Alu -10 301 1 1834 60 140 4 chr2 157115497 157115762 -93572092 - AluY SINE Alu 0 301 1 193 352 37 19 chr2 157116653 157116761 -93571093 + L2 LINE L2 2926 3035 -237 406 355 65 14 chr2 157116913 157117127 -93570727 + MIR SINE MIR 37 261 -1 238 294 29 52 chr2 157117459 157117595 -93570259 + MIR SINE MIR 59 191 -71 27 0 0 0 chr2 157118324 157118351 -93569503 + AT_rich Low_complexity Low_complexity 1 27 0 2421 69 0 0 chr2 157119255 157119561 -93568293 + AluY SINE Alu 1 306 -5 1754 135 0 47 chr2 157119674 157119782 -93568072 - L1PB3 LINE L1 -86 6068 5956 1882 134 0 64 chr2 157119782 157120096 -93567758 - AluSx SINE Alu -18 294 1 1754 135 0 47 chr2 157120096 157120139 -93567715 - L1PB3 LINE L1 -198 5956 5604 5259 179 23 32 chr2 157120139 157121992 -93565862 - L1MA9 LINE L1 -363 5791 4131 250 298 48 0 chr2 157122773 157122857 -93564997 + L2 LINE L2 3226 3313 0 282 253 11 23 chr2 157123245 157123332 -93564522 + (TATATG)n Simple_repeat Simple_repeat 4 89 0 228 135 0 0 chr2 157123336 157123373 -93564481 + (CA)n Simple_repeat Simple_repeat 2 38 0 230 240 146 29 chr2 157123461 157123632 -93564222 + L1ME4a LINE L1 5926 6116 -5 1852 89 7 29 chr2 157124058 157124339 -93563515 + AluY SINE Alu 1 275 -36 1824 75 0 56 chr2 157124691 157124957 -93562897 + AluY SINE Alu 46 296 -15 1845 229 28 52 chr2 157125228 157125761 -93562093 - MLT2B1 LTR ERVL 0 520 1 258 287 75 0 chr2 157125878 157125972 -93561882 - L2 LINE L2 -4 3268 3168 226 360 151 40 chr2 157126044 157126622 -93561232 - L2 LINE L2 -371 2943 2302 562 209 159 25 chr2 157127257 157127458 -93560396 + L1ME4a LINE L1 5894 6121 0 205 273 91 38 chr2 157128778 157128910 -93558944 - MIR SINE MIR -51 211 73 36 70 0 0 chr2 157129272 157129343 -93558511 + AT_rich Low_complexity Low_complexity 1 71 0 280 300 123 59 chr2 157129353 157129573 -93558281 - L2 LINE L2 -60 3253 3020 302 295 50 50 chr2 157130346 157130485 -93557369 + L3 LINE CR1 1350 1488 -89 291 322 70 28 chr2 157130823 157130966 -93556888 + MIR3 SINE MIR 21 169 -39 2043 116 7 0 chr2 157131026 157131311 -93556543 + AluSx SINE Alu 1 287 -25 212 0 36 0 chr2 157131327 157131355 -93556499 + (GAA)n Simple_repeat Simple_repeat 2 30 0 548 293 88 8 chr2 157131441 157131680 -93556174 + MIR SINE MIR 2 259 -3 21 36 0 0 chr2 157133119 157133147 -93554707 + AT_rich Low_complexity Low_complexity 1 28 0 486 285 87 17 chr2 157134628 157134800 -93553054 + MIR SINE MIR 10 193 -69 2183 120 7 0 chr2 157135668 157135977 -93551877 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr2 157136543 157136565 -93551289 + AT_rich Low_complexity Low_complexity 1 22 0 255 350 10 0 chr2 157136613 157136716 -93551138 - L1ME LINE L1 -530 5591 5488 180 94 0 31 chr2 157137265 157137297 -93550557 + MIR SINE MIR 132 162 -100 21 71 0 0 chr2 157137607 157137649 -93550205 + AT_rich Low_complexity Low_complexity 1 42 0 26 104 0 0 chr2 157137690 157137786 -93550068 + AT_rich Low_complexity Low_complexity 1 96 0 24 0 0 0 chr2 157137880 157137904 -93549950 + AT_rich Low_complexity Low_complexity 1 24 0 420 349 7 13 chr2 157138022 157138174 -93549680 + MLT1H LTR MaLR 136 286 -263 199 384 103 29 chr2 157138773 157139151 -93548703 - L2 LINE L2 -724 2590 2185 180 0 0 0 chr2 157139271 157139291 -93548563 + (A)n Simple_repeat Simple_repeat 1 20 0 302 283 200 0 chr2 157139968 157140088 -93547766 + MER20B DNA MER1_type 1 144 -639 5377 189 120 79 chr2 157140151 157141228 -93546626 + L1MC3 LINE L1 5996 7257 -528 321 289 0 0 chr2 157141228 157141318 -93546536 + MLT1F1 LTR MaLR 36 125 -442 5377 189 120 79 chr2 157141318 157141862 -93545992 + L1MC3 LINE L1 7257 7777 -8 1008 255 75 5 chr2 157141873 157142245 -93545609 + MER20B DNA MER1_type 238 635 -148 22 35 0 0 chr2 157142527 157142556 -93545298 + AT_rich Low_complexity Low_complexity 1 29 0 203 260 234 58 chr2 157142807 157142961 -93544893 - MER5A DNA MER1_type 0 189 9 603 320 38 60 chr2 157143675 157144044 -93543810 + L2 LINE L2 2953 3313 0 25 51 0 0 chr2 157144750 157144789 -93543065 + AT_rich Low_complexity Low_complexity 1 39 0 1001 249 61 40 chr2 157146399 157146890 -93540964 - MLT1H LTR MaLR 0 549 4 450 176 11 53 chr2 157149537 157149724 -93538130 + (TA)n Simple_repeat Simple_repeat 1 179 0 30 0 0 0 chr2 157149928 157149958 -93537896 + AT_rich Low_complexity Low_complexity 1 30 0 644 307 71 50 chr2 157151824 157152223 -93535631 + LTR16A LTR ERVL 31 457 0 246 262 116 0 chr2 157152359 157152474 -93535380 - L1MC/D LINE L1 -456 5665 5555 281 252 81 8 chr2 157152484 157152607 -93535247 - L1MC/D LINE L1 -2324 5484 5353 473 269 224 40 chr2 157152961 157153511 -93534343 - L1MC/D LINE L1 -2376 3770 3120 2567 7 0 0 chr2 157154912 157155193 -93532661 - AluYb8 SINE Alu 0 318 38 201 94 0 0 chr2 157155374 157155406 -93532448 + (T)n Simple_repeat Simple_repeat 1 32 0 193 269 104 104 chr2 157155663 157155797 -93532057 + MIR3 SINE MIR 2 135 -73 237 196 0 36 chr2 157155803 157155859 -93531995 + L2 LINE L2 3190 3243 -70 26 30 0 0 chr2 157156488 157156521 -93531333 + AT_rich Low_complexity Low_complexity 1 33 0 271 155 62 10 chr2 157156729 157156813 -93531041 + (TA)n Simple_repeat Simple_repeat 2 93 -10 1905 133 0 7 chr2 157156813 157157091 -93530763 - AluSq SINE Alu -37 276 1 271 155 62 10 chr2 157157091 157157103 -93530751 + (TA)n Simple_repeat Simple_repeat 93 103 0 219 262 19 112 chr2 157157775 157157882 -93529972 + L2 LINE L2 3217 3313 0 1078 90 0 0 chr2 157158082 157158226 -93529628 - AluSg/x SINE Alu 0 309 166 453 326 104 5 chr2 157158961 157159182 -93528672 + MIR SINE MIR 17 259 -3 224 250 0 0 chr2 157159385 157159433 -93528421 - L2 LINE L2 -17 3296 3249 284 333 58 43 chr2 157159545 157159752 -93528102 + L2 LINE L2 2666 2875 -439 251 319 53 53 chr2 157159806 157159994 -93527860 + L2 LINE L2 2959 3146 -167 22 0 0 0 chr2 157160001 157160023 -93527831 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 157160985 157161008 -93526846 + AT_rich Low_complexity Low_complexity 1 23 0 183 80 0 0 chr2 157161198 157161223 -93526631 + (GA)n Simple_repeat Simple_repeat 1 25 0 321 68 0 0 chr2 157163366 157163410 -93524444 + (CA)n Simple_repeat Simple_repeat 2 45 0 30 27 0 0 chr2 157164619 157164656 -93523198 + AT_rich Low_complexity Low_complexity 1 37 0 285 232 74 11 chr2 157165040 157165135 -93522719 + MIR SINE MIR 87 187 -75 538 239 19 52 chr2 157166007 157166162 -93521692 - L2 LINE L2 0 3313 3164 452 246 67 15 chr2 157166170 157166304 -93521550 - MIR SINE MIR -86 176 36 484 252 7 0 chr2 157168222 157168373 -93519481 + GA-rich Low_complexity Low_complexity 1 152 0 1476 148 16 12 chr2 157168383 157168639 -93519215 - MLT2C1 LTR ERVL -131 266 10 404 318 42 115 chr2 157168695 157168981 -93518873 - L2 LINE L2 -4 3268 3004 252 241 110 83 chr2 157169018 157169163 -93518691 - L2 LINE L2 -38 3275 3127 21 36 0 0 chr2 157169331 157169359 -93518495 + AT_rich Low_complexity Low_complexity 1 28 0 30 27 0 0 chr2 157169393 157169430 -93518424 + AT_rich Low_complexity Low_complexity 1 37 0 1406 212 94 44 chr2 157169642 157170123 -93517731 + MLT1D LTR MaLR 1 505 0 386 316 38 19 chr2 157171093 157171251 -93516603 - MIR3 SINE MIR -3 205 45 2666 17 0 0 chr2 157171252 157171552 -93516302 + AluYa5 SINE Alu 1 300 -11 3822 145 22 28 chr2 157171809 157172519 -93515335 + L1MA8 LINE L1 5586 6291 0 27 0 0 0 chr2 157172561 157172588 -93515266 + AT_rich Low_complexity Low_complexity 1 27 0 207 244 51 64 chr2 157172816 157172894 -93514960 + MIR SINE MIR 111 187 -75 252 0 0 0 chr2 157172939 157172967 -93514887 + (TG)n Simple_repeat Simple_repeat 2 29 0 491 295 104 6 chr2 157173386 157173559 -93514295 + MIR3 SINE MIR 19 208 0 449 34 17 0 chr2 157173751 157173810 -93514044 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 282 208 100 42 chr2 157174334 157174454 -93513400 - MIR SINE MIR -8 254 128 951 162 0 46 chr2 157174473 157174670 -93513184 - L1PA11 LINE L1 0 6174 5987 21 36 0 0 chr2 157176985 157177013 -93510841 + AT_rich Low_complexity Low_complexity 1 28 0 454 264 155 19 chr2 157177117 157177272 -93510582 + MER5A DNA MER1_type 9 184 -5 356 346 79 38 chr2 157179376 157179490 -93508364 + L3 LINE CR1 1046 1154 -423 1850 10 0 0 chr2 157179490 157179694 -93508160 + AluYb8 SINE Alu 110 313 -5 356 346 79 38 chr2 157179694 157179871 -93507983 + L3 LINE CR1 1154 1349 -228 344 105 0 0 chr2 157180470 157180527 -93507327 - L1MA8 LINE L1 -1 6290 6234 8033 174 41 30 chr2 157180527 157180812 -93507042 - L1M2 LINE L1 -658 5633 5353 1839 122 7 4 chr2 157180812 157181082 -93506772 + AluSq SINE Alu 11 281 -32 818 62 9 0 chr2 157181083 157181196 -93506658 + (GAAA)n Simple_repeat Simple_repeat 2 115 0 8033 174 41 30 chr2 157181196 157182923 -93504931 - L1M2 LINE L1 -937 5354 3584 2939 195 32 7 chr2 157182930 157183277 -93504577 + L1MC1 LINE L1 4978 5315 -1018 2003 110 0 0 chr2 157183277 157183550 -93504304 + AluSg SINE Alu 38 310 0 2939 195 32 7 chr2 157183550 157184039 -93503815 + L1MC1 LINE L1 5315 5830 -503 1667 198 6 3 chr2 157184036 157184370 -93503484 + L1PB4 LINE L1 4009 4343 -1803 * 4948 185 9 8 chr2 157184363 157185759 -93502095 + L1PB4 LINE L1 4757 6151 -5 1193 157 52 0 chr2 157185762 157185972 -93501882 + L1MC1 LINE L1 5813 6033 -300 233 253 40 0 chr2 157185970 157186045 -93501809 - L1MC5 LINE L1 -1266 6695 6618 * 280 183 0 0 chr2 157186476 157186536 -93501318 + LTR66 LTR ERVL 380 439 -171 280 236 24 24 chr2 157186541 157186664 -93501190 + (TA)n Simple_repeat Simple_repeat 2 124 0 22 56 0 0 chr2 157186946 157186982 -93500872 + AT_rich Low_complexity Low_complexity 1 36 0 483 257 188 27 chr2 157187083 157187488 -93500366 + L1MC5 LINE L1 7308 7777 -184 21 36 0 0 chr2 157189074 157189102 -93498752 + AT_rich Low_complexity Low_complexity 1 28 0 33 0 0 0 chr2 157189156 157189189 -93498665 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr2 157189755 157189783 -93498071 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 157190268 157190303 -93497551 + AT_rich Low_complexity Low_complexity 1 35 0 273 312 91 39 chr2 157191897 157192051 -93495803 + MIR3 SINE MIR 42 203 -5 23 0 0 0 chr2 157192332 157192355 -93495499 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 157192798 157192823 -93495031 + AT_rich Low_complexity Low_complexity 1 25 0 251 296 0 0 chr2 157193618 157193672 -93494182 - L2 LINE L2 -82 3190 3137 974 228 151 19 chr2 157194024 157194441 -93493413 - MER20B DNA MER1_type -37 746 275 352 197 33 72 chr2 157194762 157194914 -93492940 - Charlie7 DNA MER1_type -26 2586 2441 3189 193 132 9 chr2 157195192 157195746 -93492108 - L1 LINE L1 -786 5360 4683 2661 93 8 8 chr2 157195746 157196121 -93491733 - THE1C LTR MaLR 0 375 1 3189 193 132 9 chr2 157196121 157196340 -93491514 - L1 LINE L1 -1463 4683 4492 21 0 0 0 chr2 157196731 157196752 -93491102 + AT_rich Low_complexity Low_complexity 1 21 0 186 71 0 0 chr2 157196960 157196988 -93490866 + (GA)n Simple_repeat Simple_repeat 2 29 0 286 208 0 83 chr2 157196988 157197084 -93490770 + HAL1 LINE L1 1451 1538 -969 4637 208 47 15 chr2 157197103 157198545 -93489309 - L1MA7 LINE L1 -11 6280 4794 1745 126 76 44 chr2 157198545 157198892 -93488962 - THE1B LTR MaLR 0 444 1 682 192 0 65 chr2 157198898 157199122 -93488732 - L1M2 LINE L1 -770 5527 5336 222 37 0 0 chr2 157199983 157200010 -93487844 + (TA)n Simple_repeat Simple_repeat 1 27 0 24 32 0 0 chr2 157200798 157200829 -93487025 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 157200969 157200991 -93486863 + AT_rich Low_complexity Low_complexity 1 22 0 1060 166 20 15 chr2 157202147 157202346 -93485508 - AluJb SINE Alu -4 308 109 239 235 0 0 chr2 157202916 157202967 -93484887 + L3 LINE CR1 1520 1570 -7 25 0 0 0 chr2 157203376 157203401 -93484453 + AT_rich Low_complexity Low_complexity 1 25 0 28 0 0 0 chr2 157204615 157204643 -93483211 + AT_rich Low_complexity Low_complexity 1 28 0 34 0 0 0 chr2 157206032 157206066 -93481788 + AT_rich Low_complexity Low_complexity 1 34 0 2063 131 3 0 chr2 157206136 157206427 -93481427 + AluSx SINE Alu 1 292 -20 186 263 300 0 chr2 157206620 157206700 -93481154 - L3 LINE CR1 -195 1382 1279 22 0 0 0 chr2 157206876 157206898 -93480956 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 157207075 157207112 -93480742 + AT_rich Low_complexity Low_complexity 1 37 0 699 224 13 13 chr2 157208540 157208710 -93479144 - MIR SINE MIR -32 230 63 2263 72 0 10 chr2 157208719 157209009 -93478845 + AluY SINE Alu 19 305 -6 349 271 100 0 chr2 157212684 157212794 -93475060 + MIR SINE MIR 38 156 -62 207 114 0 0 chr2 157213232 157213267 -93474587 + (TC)n Simple_repeat Simple_repeat 2 36 0 196 102 57 45 chr2 157213316 157213404 -93474450 + (TTATA)n Simple_repeat Simple_repeat 5 93 0 642 299 30 5 chr2 157213906 157214103 -93473751 + MIR SINE MIR 12 213 -49 27 0 0 0 chr2 157214231 157214258 -93473596 + AT_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr2 157216700 157216734 -93471120 + AT_rich Low_complexity Low_complexity 1 34 0 193 309 0 0 chr2 157217335 157217377 -93470477 + MIR SINE MIR 51 92 -170 435 279 58 19 chr2 157219061 157219215 -93468639 + MIR SINE MIR 55 214 -48 22 56 0 0 chr2 157219262 157219298 -93468556 + AT_rich Low_complexity Low_complexity 1 36 0 2235 209 111 91 chr2 157219652 157220746 -93467108 - MER52A LTR ERV1 -395 1231 1 579 188 29 58 chr2 157220996 157221134 -93466720 - LTR53 LTR ERVL -3 516 383 7106 50 7 0 chr2 157221739 157222810 -93465044 + L1PA5 LINE L1 5078 6152 -2 318 367 143 26 chr2 157222812 157223690 -93464164 + L2 LINE L2 1394 2374 -940 22 0 0 0 chr2 157224032 157224054 -93463800 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr2 157224249 157224287 -93463567 + AT_rich Low_complexity Low_complexity 1 38 0 514 325 60 38 chr2 157224383 157224700 -93463154 + LTR16A LTR ERVL 119 442 -8 23 33 0 0 chr2 157225187 157225217 -93462637 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 157225397 157225423 -93462431 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 157225598 157225620 -93462234 + AT_rich Low_complexity Low_complexity 1 22 0 255 280 145 68 chr2 157225707 157225914 -93461940 - MIR SINE MIR -11 251 29 353 341 36 23 chr2 157225943 157226163 -93461691 + L1MC1 LINE L1 3728 3950 -2196 437 297 100 23 chr2 157226391 157226701 -93461153 + L1MC1 LINE L1 4151 4484 -1662 181 210 32 0 chr2 157226751 157226813 -93461041 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 219 204 21 54 chr2 157226826 157226919 -93460935 + (TTTA)n Simple_repeat Simple_repeat 2 91 0 269 332 10 91 chr2 157227015 157227158 -93460696 + L1MC1 LINE L1 5451 5573 -2235 2076 92 7 20 chr2 157227158 157227462 -93460392 - AluSq SINE Alu -11 302 3 269 332 10 91 chr2 157227462 157227526 -93460328 + L1MC1 LINE L1 5573 5641 -2167 2110 70 17 10 chr2 157227871 157228173 -93459681 + AluY SINE Alu 5 308 -3 609 137 10 0 chr2 157228175 157228277 -93459577 + L1MC1 LINE L1 5845 5947 -386 435 279 58 19 chr2 157228524 157228678 -93459176 + MIR SINE MIR 55 214 -48 22 56 0 0 chr2 157228725 157228761 -93459093 + AT_rich Low_complexity Low_complexity 1 36 0 185 0 40 0 chr2 157230835 157230860 -93456994 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 346 316 68 34 chr2 157231278 157231460 -93456394 + MIR3 SINE MIR 35 219 -39 27 0 0 0 chr2 157234113 157234140 -93453714 + AT_rich Low_complexity Low_complexity 1 27 0 196 321 67 57 chr2 157234246 157234439 -93453415 + L2 LINE L2 2780 2974 -340 583 328 60 34 chr2 157234497 157234765 -93453089 + L2 LINE L2 2992 3266 -6 251 156 22 0 chr2 157234841 157234886 -93452968 + L2 LINE L2 3268 3313 0 258 167 0 56 chr2 157235922 157235994 -93451860 + T-rich Low_complexity Low_complexity 3 70 0 691 139 0 17 chr2 157236469 157236584 -93451270 + FLAM_A SINE Alu 20 132 -10 788 95 0 17 chr2 157238131 157238247 -93449607 - L1PA13 LINE L1 -430 5738 5625 2832 106 2 28 chr2 157238247 157238586 -93449268 + L1PA13 LINE L1 5729 6057 -106 2120 85 0 3 chr2 157238586 157238914 -93448940 + AluY SINE Alu 1 327 0 2832 106 2 28 chr2 157238914 157239008 -93448846 + L1PA13 LINE L1 6057 6152 -11 2019 115 3 10 chr2 157239009 157239346 -93448508 + AluSx SINE Alu 1 312 0 338 225 40 6 chr2 157240064 157240237 -93447617 + (TA)n Simple_repeat Simple_repeat 1 179 0 383 219 19 0 chr2 157240266 157240480 -93447374 + (TA)n Simple_repeat Simple_repeat 1 218 0 230 250 0 0 chr2 157240481 157240549 -93447305 - L1MC4 LINE L1 -1332 6710 6643 23 0 0 0 chr2 157241680 157241703 -93446151 + AT_rich Low_complexity Low_complexity 1 23 0 252 86 0 0 chr2 157241887 157241922 -93445932 + (GGA)n Simple_repeat Simple_repeat 3 37 0 218 357 0 0 chr2 157242774 157242844 -93445010 - MIR SINE MIR -19 243 174 21 57 0 0 chr2 157242847 157242882 -93444972 + AT_rich Low_complexity Low_complexity 1 35 0 30 27 0 0 chr2 157242922 157242959 -93444895 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 157243684 157243705 -93444149 + AT_rich Low_complexity Low_complexity 1 21 0 664 318 99 45 chr2 157243807 157244313 -93443541 + L2 LINE L2 2163 2695 -619 22 0 0 0 chr2 157244333 157244355 -93443499 + AT_rich Low_complexity Low_complexity 1 22 0 186 384 27 36 chr2 157244732 157244844 -93443010 - L2 LINE L2 -237 3035 2925 342 363 102 8 chr2 157245101 157245357 -93442497 - L2 LINE L2 -579 2735 2456 234 321 44 22 chr2 157246747 157246884 -93440970 - MIR SINE MIR -10 252 113 2546 246 86 10 chr2 157247701 157248764 -93439090 - L1ME LINE L1 -547 5615 4475 2205 277 28 26 chr2 157248993 157249646 -93438208 + L1M4b LINE L1 229 882 -5977 24 0 0 0 chr2 157249646 157249670 -93438184 + AT_rich Low_complexity Low_complexity 1 24 0 2252 66 7 3 chr2 157249670 157249958 -93437896 - AluSx SINE Alu -23 289 1 1986 186 48 36 chr2 157249998 157250516 -93437338 + L1MB8 LINE L1 5653 6169 -9 21 0 0 0 chr2 157255357 157255378 -93432476 + AT_rich Low_complexity Low_complexity 1 21 0 225 65 0 0 chr2 157258160 157258191 -93429663 + (GAAA)n Simple_repeat Simple_repeat 4 34 0 324 0 0 0 chr2 157258593 157258629 -93429225 + (CA)n Simple_repeat Simple_repeat 1 36 0 463 274 211 15 chr2 157259069 157259335 -93428519 + L1ME LINE L1 5502 5819 -302 925 97 149 51 chr2 157259452 157259627 -93428227 + AluSg/x SINE Alu 114 305 -7 211 309 144 43 chr2 157260997 157261136 -93426718 + MER5A DNA MER1_type 37 189 0 23 33 0 0 chr2 157261507 157261537 -93426317 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 157261605 157261633 -93426221 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 157261969 157261990 -93425864 + AT_rich Low_complexity Low_complexity 1 21 0 216 111 0 0 chr2 157261992 157262028 -93425826 + (CAATT)n Simple_repeat Simple_repeat 3 38 0 202 347 0 51 chr2 157262252 157262350 -93425504 - L2 LINE L2 -261 3011 2919 344 320 16 16 chr2 157263056 157263181 -93424673 + REP3 LTR ERV 3 127 -435 293 384 0 20 chr2 157263709 157263855 -93423999 - MIR SINE MIR -110 152 10 322 298 88 44 chr2 157264148 157264420 -93423434 - L1ME LINE L1 -5496 574 291 1192 66 0 0 chr2 157264420 157264572 -93423282 - AluY SINE Alu -3 308 157 183 42 0 0 chr2 157264659 157264683 -93423171 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 369 298 10 0 chr2 157264757 157264861 -93422993 - L1ME LINE L1 -5933 137 33 209 208 0 19 chr2 157265056 157265109 -93422745 + T-rich Low_complexity Low_complexity 4 55 0 4943 280 42 39 chr2 157265731 157268101 -93419753 + L1M3b LINE L1 1 2176 -4175 2231 90 7 10 chr2 157268288 157268598 -93419256 + AluY SINE Alu 3 311 0 28 48 0 0 chr2 157268849 157268891 -93418963 + AT_rich Low_complexity Low_complexity 1 42 0 247 329 53 13 chr2 157269267 157269495 -93418359 - L1M4 LINE L1 -2222 3924 3688 1958 122 28 0 chr2 157269774 157270061 -93417793 + AluSq SINE Alu 1 295 -18 21 0 0 0 chr2 157270163 157270184 -93417670 + AT_rich Low_complexity Low_complexity 1 21 0 699 268 6 16 chr2 157270318 157270501 -93417353 + MIR SINE MIR 7 187 -75 189 0 0 0 chr2 157270504 157270525 -93417329 + (TG)n Simple_repeat Simple_repeat 2 22 0 44 0 0 0 chr2 157270525 157270569 -93417285 + AT_rich Low_complexity Low_complexity 1 44 0 857 79 0 0 chr2 157270569 157270683 -93417171 - L1PA8 LINE L1 -3 6169 6056 859 138 0 0 chr2 157270867 157270990 -93416864 - AluSq/x SINE Alu -187 125 3 1521 257 79 28 chr2 157271132 157271602 -93416252 - MLT1D LTR MaLR -5 500 7 895 236 5 10 chr2 157271987 157272182 -93415672 - MLT1B LTR MaLR 0 390 197 719 210 50 108 chr2 157272423 157272866 -93414988 + L1MEd LINE L1 823 1239 -4880 354 267 0 12 chr2 157272867 157272953 -93414901 + Tigger2a DNA MER2_type 5 89 -345 1352 163 17 4 chr2 157272965 157273198 -93414656 + Tigger2a DNA MER2_type 209 444 0 21 0 0 0 chr2 157273272 157273293 -93414561 + AT_rich Low_complexity Low_complexity 1 21 0 1380 154 89 76 chr2 157274468 157274838 -93413016 - THE1C LTR MaLR 0 375 1 9746 120 4 69 chr2 157274838 157276527 -93411327 - THE1C-int LTR MaLR 0 1580 1 1632 167 73 14 chr2 157276527 157276881 -93410973 - THE1C LTR MaLR 0 375 1 323 318 95 0 chr2 157276926 157277074 -93410780 - L1ME LINE L1 -371 5799 5638 236 242 44 0 chr2 157277075 157277166 -93410688 - L1ME LINE L1 -769 5401 5307 198 121 35 17 chr2 157277274 157277332 -93410522 + (TA)n Simple_repeat Simple_repeat 1 59 0 620 282 71 85 chr2 157277385 157278705 -93409149 - L1ME LINE L1 -1930 4216 2915 405 337 99 25 chr2 157278848 157279130 -93408724 - L2 LINE L2 -908 2406 2104 384 251 64 53 chr2 157279185 157279356 -93408498 - L2 LINE L2 -1545 1769 1597 2384 205 30 47 chr2 157279376 157279594 -93408260 + L1ME2 LINE L1 5468 5688 -476 928 116 7 7 chr2 157279594 157279740 -93408114 + L1PB2 LINE L1 6003 6148 -3 2384 205 30 47 chr2 157279740 157280165 -93407689 + L1ME2 LINE L1 5688 6100 -64 189 0 0 0 chr2 157280497 157280518 -93407336 + (T)n Simple_repeat Simple_repeat 1 21 0 400 274 23 63 chr2 157285377 157285552 -93402302 + MIR SINE MIR 40 207 -55 1597 186 55 26 chr2 157285606 157285951 -93401903 - MLT1B LTR MaLR 0 390 36 254 345 18 0 chr2 157286141 157286252 -93401602 + MLT1J2 LTR MaLR 286 398 -52 349 276 124 21 chr2 157286252 157286397 -93401457 + MLT1E LTR MaLR 1 160 -433 1258 315 50 26 chr2 157286401 157286865 -93400989 + MLT1E LTR MaLR 119 593 0 229 354 98 20 chr2 157286931 157287185 -93400669 + L3 LINE CR1 478 751 -826 2169 137 6 11 chr2 157287567 157287917 -93399937 + MER7A DNA MER2_type 1 346 0 329 306 97 49 chr2 157289317 157289461 -93398393 + MIR SINE MIR 17 167 -95 247 263 26 26 chr2 157289471 157289547 -93398307 - MIR SINE MIR 0 262 187 * 269 266 31 0 chr2 157289538 157289602 -93398252 + MIR SINE MIR 189 254 -8 203 236 146 0 chr2 157290711 157290766 -93397088 - L2 LINE L2 -246 3067 3005 417 314 76 54 chr2 157290806 157291214 -93396640 - L1MC/D LINE L1 -2060 5748 5332 1482 203 33 0 chr2 157291463 157291734 -93396120 + AluJb SINE Alu 1 280 -32 183 139 0 0 chr2 157291761 157291797 -93396057 + (TA)n Simple_repeat Simple_repeat 2 37 0 596 291 137 32 chr2 157291817 157292226 -93395628 - L2 LINE L2 -185 3128 2587 1608 206 7 10 chr2 157292282 157292588 -93395266 + AluJb SINE Alu 3 307 -5 3131 181 32 3 chr2 157292862 157293447 -93394407 - MER7C DNA MER2_type 0 602 1 25 0 0 0 chr2 157293528 157293553 -93394301 + AT_rich Low_complexity Low_complexity 1 25 0 229 88 44 88 chr2 157293943 157294011 -93393843 - L1M4 LINE L1 -969 5177 5113 730 279 120 62 chr2 157294359 157294826 -93393028 + MLT1H LTR MaLR 1 536 -13 5864 170 17 22 chr2 157295184 157300218 -93387636 + L1PA10 LINE L1 10 4947 -1536 1271 76 0 0 chr2 157300218 157300388 -93387466 + L1PA6 LINE L1 5982 6152 -2 5864 170 17 22 chr2 157300388 157301913 -93385941 + L1PA10 LINE L1 4947 6479 -4 392 0 21 0 chr2 157301971 157302019 -93385835 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 22 70 0 0 chr2 157302338 157302381 -93385473 + AT_rich Low_complexity Low_complexity 1 43 0 23 33 0 0 chr2 157305505 157305535 -93382319 + AT_rich Low_complexity Low_complexity 1 30 0 258 239 43 33 chr2 157305812 157305904 -93381950 + L1ME LINE L1 676 768 -5302 * 785 176 29 60 chr2 157305892 157306024 -93381830 + L1MA9 LINE L1 5822 5956 -348 1288 208 24 41 chr2 157306024 157306317 -93381537 + AluJo SINE Alu 1 288 -24 785 176 29 60 chr2 157306317 157306583 -93381271 + L1MA9 LINE L1 5956 6292 -12 409 170 52 15 chr2 157306694 157306829 -93381025 + L1M4 LINE L1 2847 2986 -3160 862 280 111 49 chr2 157307443 157308398 -93379456 + L1ME LINE L1 393 1404 -4676 2410 78 6 3 chr2 157308420 157308753 -93379101 + L1PA7 LINE L1 5821 6154 0 400 105 0 0 chr2 157308757 157308814 -93379040 + L1PA13 LINE L1 6089 6145 -18 445 300 44 6 chr2 157308819 157308979 -93378875 + L1ME2 LINE L1 5990 6155 -9 1387 247 108 23 chr2 157309005 157309594 -93378260 + L1MC4 LINE L1 6382 7089 -798 461 137 0 0 chr2 157310444 157310517 -93377337 + L1MC3 LINE L1 6074 6146 -1639 20298 132 17 78 chr2 157310759 157314872 -93372982 - L1P LINE L1 -2272 3874 12 539 279 34 5 chr2 157314896 157315104 -93372750 - L1MCa LINE L1 -3024 3540 3327 1319 203 15 15 chr2 157315117 157315413 -93372441 + AluJo SINE Alu 13 308 0 1041 231 109 0 chr2 157315422 157315725 -93372129 - L1MCa LINE L1 -3244 3320 2985 912 162 45 15 chr2 157315750 157315948 -93371906 - L1MCa LINE L1 -3973 2591 2388 968 176 0 0 chr2 157315962 157316121 -93371733 + FRAM SINE Alu 2 160 -16 647 221 218 16 chr2 157316128 157316431 -93371423 - L1MCa LINE L1 -4210 2354 1991 2357 276 49 39 chr2 157316440 157317311 -93370543 - L1MCa LINE L1 -5163 882 3 233 143 0 20 chr2 157317456 157317505 -93370349 + (CAT)n Simple_repeat Simple_repeat 1 48 0 1088 120 0 0 chr2 157317596 157317746 -93370108 + AluSg/x SINE Alu 152 301 -9 22 56 0 0 chr2 157318825 157318861 -93368993 + AT_rich Low_complexity Low_complexity 1 36 0 203 189 0 0 chr2 157319169 157319206 -93368648 + T-rich Low_complexity Low_complexity 1 37 0 405 313 61 48 chr2 157319270 157319580 -93368274 + MER102a DNA MER1_type 13 326 -4 1934 167 53 0 chr2 157320729 157321088 -93366766 + L1PB4 LINE L1 5776 6153 -3 808 228 6 0 chr2 157321268 157321439 -93366415 - L1MC1 LINE L1 -20 6313 6142 2306 226 48 27 chr2 157321565 157322268 -93365586 - L1M4 LINE L1 -1081 5065 4348 429 284 71 33 chr2 157322275 157322458 -93365396 - MIR SINE MIR -63 199 10 197 261 0 0 chr2 157323418 157323464 -93364390 + L2 LINE L2 2216 2261 -1053 2730 67 3 0 chr2 157323472 157323831 -93364023 + L1PA7 LINE L1 5795 6154 0 709 265 80 25 chr2 157324308 157324546 -93363308 - MIR SINE MIR -10 252 2 195 69 0 0 chr2 157325124 157325153 -93362701 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 279 273 130 13 chr2 157325216 157325370 -93362484 + HAL1 LINE L1 1404 1575 -932 537 311 22 0 chr2 157326179 157326362 -93361492 + MER115 DNA AcHobo 507 693 0 308 344 116 18 chr2 157326422 157326759 -93361095 - L1MDa LINE L1 -4502 2038 1669 184 277 43 0 chr2 157328178 157328225 -93359629 - MIR SINE MIR -63 145 97 14746 174 16 2 chr2 157328316 157332084 -93355770 + L1PA13 LINE L1 2365 6163 0 230 0 33 0 chr2 157333542 157333572 -93354282 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 279 0 0 0 chr2 157333571 157333602 -93354252 + (CA)n Simple_repeat Simple_repeat 2 32 0 212 271 30 36 chr2 157334328 157334494 -93353360 + (TATATG)n Simple_repeat Simple_repeat 4 168 0 855 141 59 0 chr2 157334588 157334723 -93353131 - AluJb SINE Alu -23 289 147 830 253 38 8 chr2 157335826 157336091 -93351763 - L1M4 LINE L1 -1027 5119 4847 304 375 83 29 chr2 157336103 157336711 -93351143 + L1M2 LINE L1 10 1572 -5277 452 346 32 45 chr2 157336789 157337101 -93350753 + L1PB4 LINE L1 53 360 -5844 3714 266 34 21 chr2 157337389 157339430 -93348424 + L1PB4 LINE L1 571 2552 -3651 1466 185 73 20 chr2 157339433 157339789 -93348065 + THE1C LTR MaLR 1 375 0 8141 130 12 128 chr2 157339792 157341245 -93346609 + THE1C-int LTR MaLR 4 1215 -365 1814 122 0 0 chr2 157341245 157341499 -93346355 - AluSx SINE Alu -3 309 56 8141 130 12 128 chr2 157341499 157341828 -93346026 + THE1C-int LTR MaLR 1215 1580 0 1705 163 70 20 chr2 157341828 157342185 -93345669 + THE1C LTR MaLR 1 375 0 3123 243 20 11 chr2 157342185 157343089 -93344765 + L1PB4 LINE L1 2551 3462 -2741 4222 199 38 31 chr2 157343089 157344898 -93342956 + L1PB4 LINE L1 4330 6143 -70 1647 259 86 18 chr2 157344893 157345787 -93342067 - L1M4b LINE L1 -3270 3687 2774 * 288 253 24 12 chr2 157346185 157346268 -93341586 + (TATG)n Simple_repeat Simple_repeat 1 84 0 934 178 12 6 chr2 157346268 157346431 -93341423 + Tigger4(Zombi) DNA MER2_type 1 164 -2567 3865 110 5 0 chr2 157346431 157346987 -93340867 + Tigger4(Zombi) DNA MER2_type 2173 2731 0 1648 294 70 16 chr2 157347030 157348644 -93339210 - L1M4b LINE L1 -5123 1732 3 1629 263 78 20 chr2 157348654 157349396 -93338458 - L1ME3 LINE L1 -220 5942 5153 4332 157 36 12 chr2 157399401 157399735 -93288119 + L1MA4A LINE L1 5444 5769 -534 2484 60 0 10 chr2 157399735 157400049 -93287805 + AluY SINE Alu 1 311 0 4332 157 36 12 chr2 157400049 157400547 -93287307 + L1MA4A LINE L1 5769 6296 -7 367 265 39 2 chr2 157400548 157400693 -93287161 + L1ME2 LINE L1 5305 5454 -788 207 182 39 13 chr2 157400735 157400812 -93287042 + (TATG)n Simple_repeat Simple_repeat 2 80 0 853 302 16 19 chr2 157400815 157401133 -93286721 + L1ME2 LINE L1 5848 6164 0 22 0 0 0 chr2 157401154 157401176 -93286678 + AT_rich Low_complexity Low_complexity 1 22 0 275 314 82 55 chr2 157402566 157402786 -93285068 + L2 LINE L2 1481 1706 -1608 311 133 36 24 chr2 157402786 157402869 -93284985 + GA-rich Low_complexity Low_complexity 1 84 0 1085 329 107 20 chr2 157402997 157403687 -93284167 + L2 LINE L2 1731 2480 -834 255 377 11 60 chr2 157403694 157403736 -93284118 + L2 LINE L2 2736 2779 -535 2255 193 16 47 chr2 157403736 157404222 -93283632 - MER70A LTR ERVL -1 471 1 255 377 11 60 chr2 157404222 157404362 -93283492 + L2 LINE L2 2779 2909 -405 467 291 81 0 chr2 157404634 157404782 -93283072 + L2 LINE L2 3128 3287 -26 930 218 68 28 chr2 157405654 157405906 -93281948 + ORSL DNA AcHobo 14 275 0 270 335 71 29 chr2 157407385 157407555 -93280299 + MIR SINE MIR 8 184 -78 415 278 112 60 chr2 157408124 157408942 -93278912 + HAL1 LINE L1 838 1767 -740 322 278 94 78 chr2 157408946 157409143 -93278711 + HAL1 LINE L1 1835 2038 -469 1190 158 166 46 chr2 157409143 157409402 -93278452 + AluJb SINE Alu 5 294 -8 322 278 94 78 chr2 157409402 157409449 -93278405 + HAL1 LINE L1 2038 2083 -424 2109 131 3 3 chr2 157413085 157413391 -93274463 + AluSq SINE Alu 3 308 -5 237 159 0 0 chr2 157413507 157413551 -93274303 + (CA)n Simple_repeat Simple_repeat 1 44 0 23 33 0 0 chr2 157413718 157413748 -93274106 + AT_rich Low_complexity Low_complexity 1 30 0 185 391 0 0 chr2 157414033 157414120 -93273734 + L2 LINE L2 3186 3272 0 270 81 0 0 chr2 157414287 157414324 -93273530 + (TG)n Simple_repeat Simple_repeat 2 38 0 604 244 0 0 chr2 157414580 157414711 -93273143 - FLAM_A SINE Alu -2 131 1 21 57 0 0 chr2 157416833 157416868 -93270986 + AT_rich Low_complexity Low_complexity 1 35 0 300 111 0 0 chr2 157418127 157418172 -93269682 + (CA)n Simple_repeat Simple_repeat 2 46 0 420 367 20 0 chr2 157421821 157421968 -93265886 - MIR3 SINE MIR -21 187 38 317 301 36 67 chr2 157422160 157422353 -93265501 + L1MC4a LINE L1 5725 5911 -1897 21 0 0 0 chr2 157422535 157422556 -93265298 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr2 157422702 157422733 -93265121 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr2 157422841 157422866 -93264988 + AT_rich Low_complexity Low_complexity 1 25 0 2186 135 7 52 chr2 157425157 157425565 -93262289 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr2 157426886 157426908 -93260946 + AT_rich Low_complexity Low_complexity 1 22 0 2021 132 3 0 chr2 157427301 157427611 -93260243 + AluSx SINE Alu 1 311 -1 1314 210 44 26 chr2 157429814 157430199 -93257655 - Charlie5 DNA MER1_type 0 2623 2232 404 261 0 17 chr2 157430196 157430315 -93257539 - Charlie5 DNA MER1_type -2494 118 2 * 1835 121 0 81 chr2 157430364 157430686 -93257168 + AluSx SINE Alu 1 296 -16 393 303 45 45 chr2 157431217 157431415 -93256439 - MIR SINE MIR -30 232 35 288 215 38 0 chr2 157431984 157432063 -93255791 - Charlie4 DNA MER1_type -53 1908 1827 206 280 144 45 chr2 157432213 157432345 -93255509 - L2 LINE L2 -10 3303 3159 661 230 11 43 chr2 157432414 157432601 -93255253 + MIR SINE MIR 79 259 -3 24 53 0 0 chr2 157432622 157432660 -93255194 + AT_rich Low_complexity Low_complexity 1 38 0 1788 180 36 3 chr2 157432684 157433017 -93254837 - MER2 DNA MER2_type 0 344 1 2036 135 3 3 chr2 157433613 157433909 -93253945 - AluSg SINE Alu -14 296 1 2156 93 35 0 chr2 157434004 157434317 -93253537 + L1PA12 LINE L1 5677 6000 -168 30979 75 32 21 chr2 157434319 157438550 -93249304 - HERVL LTR ERVL -1003 4651 376 1452 128 0 29 chr2 157438663 157438709 -93249145 - MLT2A1 LTR ERVL 0 444 398 276 30 0 0 chr2 157438709 157438742 -93249112 + (TG)n Simple_repeat Simple_repeat 2 34 0 1452 128 0 29 chr2 157438742 157438937 -93248917 - MLT2A1 LTR ERVL -46 398 210 23 0 0 0 chr2 157440019 157440042 -93247812 + AT_rich Low_complexity Low_complexity 1 23 0 515 233 45 60 chr2 157441357 157441661 -93246193 - LTR16A1 LTR ERVL 0 457 107 290 304 33 22 chr2 157441690 157441782 -93246072 - LTR16A1 LTR ERVL -346 111 19 41 58 0 0 chr2 157442508 157442577 -93245277 + AT_rich Low_complexity Low_complexity 1 69 0 2381 226 96 40 chr2 157442740 157443626 -93244228 + L1ME1 LINE L1 5127 6154 -12 348 361 13 93 chr2 157445223 157445600 -93242254 + L2 LINE L2 2918 3264 -8 925 286 65 12 chr2 157446376 157446775 -93241079 - L1MEc LINE L1 -3394 2821 2402 1889 285 88 39 chr2 157446827 157448304 -93239550 - L1MEc LINE L1 -4064 2332 783 246 260 0 0 chr2 157449042 157449115 -93238739 + (TA)n Simple_repeat Simple_repeat 2 74 0 5468 107 14 21 chr2 157450151 157451454 -93236400 - L1PA14 LINE L1 0 6161 4849 10864 186 46 24 chr2 157451454 157452416 -93235438 + L1P LINE L1 2377 3316 -2830 1804 146 168 14 chr2 157452416 157452785 -93235069 - MSTA LTR MaLR -2 426 1 10864 186 46 24 chr2 157452785 157454262 -93233592 + L1P LINE L1 3316 4870 -1276 26 0 0 0 chr2 157454880 157454906 -93232948 + AT_rich Low_complexity Low_complexity 1 26 0 240 211 10 19 chr2 157456359 157456463 -93231391 + (TA)n Simple_repeat Simple_repeat 1 103 0 30 27 0 0 chr2 157456841 157456878 -93230976 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr2 157457381 157457406 -93230448 + AT_rich Low_complexity Low_complexity 1 25 0 2678 112 21 9 chr2 157459224 157459876 -93227978 - L1M2 LINE L1 -4941 1908 3 274 255 32 0 chr2 157461220 157461314 -93226540 + L1ME LINE L1 5684 5780 -341 1957 134 10 0 chr2 157461374 157461666 -93226188 + AluSx SINE Alu 4 298 -14 466 263 52 33 chr2 157461748 157461773 -93226081 + L1ME3A LINE L1 5676 5699 -467 2138 98 3 14 chr2 157461773 157462070 -93225784 + AluY SINE Alu 2 295 -16 466 263 52 33 chr2 157462070 157462245 -93225609 + L1ME3A LINE L1 5699 5882 -284 1616 196 7 0 chr2 157462288 157462573 -93225281 - AluJo SINE Alu -23 289 3 216 0 0 0 chr2 157462598 157462622 -93225232 + (CA)n Simple_repeat Simple_repeat 1 24 0 1777 130 0 0 chr2 157462941 157463203 -93224651 + LTR1 LTR ERV1 514 775 -10 706 352 92 0 chr2 157464166 157464535 -93223319 - L2 LINE L2 0 3313 2911 1301 332 148 18 chr2 157464543 157465152 -93222702 - L2 LINE L2 -560 2754 2226 2056 9 0 0 chr2 157465152 157465378 -93222476 + AluY SINE Alu 86 311 0 1301 332 148 18 chr2 157465378 157465782 -93222072 - L2 LINE L2 -1088 2226 1609 354 395 54 0 chr2 157466859 157467006 -93220848 + MER91A DNA MER1_type 36 190 -6 432 383 60 4 chr2 157467264 157467512 -93220342 + MIR SINE MIR 1 262 0 246 291 164 9 chr2 157467565 157467675 -93220179 + L2 LINE L2 3186 3312 -1 437 277 173 50 chr2 157467803 157468121 -93219733 - MLT1G1 LTR MaLR -22 573 217 824 257 80 14 chr2 157468572 157468996 -93218858 + L1MC5 LINE L1 7474 7925 -36 1019 254 77 19 chr2 157469364 157469675 -93218179 + MLT1I LTR MaLR 81 409 0 344 258 118 21 chr2 157470176 157470356 -93217498 - MLT1I LTR MaLR 0 409 263 229 294 193 0 chr2 157470447 157470556 -93217298 - MLT1I LTR MaLR -279 130 1 180 176 0 0 chr2 157470821 157470855 -93216999 + (TAA)n Simple_repeat Simple_repeat 2 35 0 255 311 0 0 chr2 157470859 157470933 -93216921 - MIR SINE MIR -5 257 184 734 359 54 28 chr2 157472061 157472448 -93215406 + L2 LINE L2 2874 3270 -2 384 325 70 13 chr2 157472642 157472799 -93215055 - MIR SINE MIR -31 231 66 25 51 0 0 chr2 157474192 157474231 -93213623 + AT_rich Low_complexity Low_complexity 1 39 0 570 339 101 67 chr2 157474511 157474957 -93212897 - L3 LINE CR1 -23 1554 1094 371 235 42 17 chr2 157474966 157475085 -93212769 + L1ME1 LINE L1 6043 6164 -2 195 250 287 37 chr2 157475369 157475477 -93212377 - L2 LINE L2 0 3272 3138 331 373 116 10 chr2 157475581 157476026 -93211828 - L2 LINE L2 -199 3073 2581 211 321 147 18 chr2 157475981 157476090 -93211764 - L3 LINE CR1 -920 657 535 * 350 240 30 20 chr2 157476092 157476192 -93211662 + Charlie7 DNA MER1_type 4 104 -2508 180 347 83 0 chr2 157476314 157476386 -93211468 - L3 LINE CR1 -1026 551 474 600 261 36 56 chr2 157476625 157476874 -93210980 + L1MD1 LINE L1 4365 4608 -1538 1838 227 43 29 chr2 157476890 157477745 -93210109 + L1MD1 LINE L1 4710 5569 -745 931 157 0 14 chr2 157477747 157477930 -93209924 - AluJb SINE Alu 0 317 137 784 199 108 19 chr2 157477931 157477958 -93209896 + L1MD1 LINE L1 5555 5578 -664 2235 96 7 0 chr2 157477958 157478260 -93209594 + AluSx SINE Alu 1 304 -8 784 199 108 19 chr2 157478260 157478602 -93209252 + L1MD1 LINE L1 5578 5888 -354 1115 207 153 7 chr2 157478602 157478902 -93208952 + MER2 DNA MER2_type 1 344 0 784 199 108 19 chr2 157478902 157479167 -93208687 + L1MD1 LINE L1 5888 6234 -8 387 98 0 0 chr2 157479315 157479376 -93208478 + (TG)n Simple_repeat Simple_repeat 2 62 0 34 24 0 0 chr2 157479586 157479627 -93208227 + AT_rich Low_complexity Low_complexity 1 41 0 910 191 0 0 chr2 157480129 157480291 -93207563 - AluSg/x SINE Alu -19 293 132 27 62 0 0 chr2 157480303 157480351 -93207503 + AT_rich Low_complexity Low_complexity 1 48 0 2127 148 25 10 chr2 157480580 157480973 -93206881 - L1MA8 LINE L1 0 6291 5893 24 0 0 0 chr2 157484133 157484157 -93203697 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 157485422 157485443 -93202411 + AT_rich Low_complexity Low_complexity 1 21 0 235 280 88 52 chr2 157486054 157486247 -93201607 + L2 LINE L2 3114 3313 0 33 0 0 0 chr2 157487253 157487286 -93200568 + AT_rich Low_complexity Low_complexity 1 33 0 203 0 37 0 chr2 157488587 157488614 -93199240 + (CA)n Simple_repeat Simple_repeat 2 29 0 2346 220 56 18 chr2 157490550 157491104 -93196750 + L1M1 LINE L1 2 576 -6273 5680 210 12 5 chr2 157491133 157492292 -93195562 + L1M1 LINE L1 1016 2182 -4667 13342 105 19 0 chr2 157492292 157494188 -93193666 + L1P LINE L1 1 1931 -4215 9346 37 4 2 chr2 157494189 157496103 -93191751 + L1PA5 LINE L1 4239 6154 0 3531 194 24 12 chr2 157496104 157497215 -93190639 + L1M1 LINE L1 2171 4665 -2183 27025 95 8 12 chr2 157497219 157502889 -93184965 + L1PA7 LINE L1 1 5687 -782 1991 131 0 26 chr2 157502889 157503195 -93184659 + AluSg1 SINE Alu 1 298 -11 27025 95 8 12 chr2 157503195 157503975 -93183879 + L1PA7 LINE L1 5687 6469 0 5834 192 49 26 chr2 157503982 157505447 -93182407 + L1M1 LINE L1 4654 6159 -743 225 204 20 0 chr2 157505550 157505599 -93182255 + (TAGA)n Simple_repeat Simple_repeat 2 51 0 536 324 69 20 chr2 157505692 157505939 -93181915 + MIR SINE MIR 2 260 -2 777 311 61 59 chr2 157506574 157506966 -93180888 - LTR16C LTR ERVL -2 489 97 251 291 75 30 chr2 157507286 157507420 -93180434 + L1ME LINE L1 5579 5718 -403 299 133 0 17 chr2 157507456 157507516 -93180338 + (ATG)n Simple_repeat Simple_repeat 1 59 0 593 289 57 57 chr2 157507562 157507790 -93180064 - MIR SINE MIR -3 259 32 225 261 70 26 chr2 157507790 157507905 -93179949 + L1ME LINE L1 5789 5908 -213 201 74 0 0 chr2 157508556 157508583 -93179271 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 361 274 85 12 chr2 157508801 157509049 -93178805 + L1M4 LINE L1 2297 2562 -3584 2368 96 0 0 chr2 157509525 157509827 -93178027 - AluSx SINE Alu -10 302 1 213 213 157 74 chr2 157510788 157510896 -93176958 - MIR SINE MIR -57 205 89 1565 105 0 23 chr2 157511371 157511590 -93176264 - AluSq SINE Alu -91 222 9 13934 136 44 13 chr2 157512168 157514500 -93173354 + Tigger1 DNA MER2_type 2 2404 -14 23 0 0 0 chr2 157516363 157516386 -93171468 + AT_rich Low_complexity Low_complexity 1 23 0 476 291 28 0 chr2 157516507 157516648 -93171206 - MIR SINE MIR -111 151 7 402 311 184 18 chr2 157516823 157517219 -93170635 - L2 LINE L2 -954 2360 1899 23 0 0 0 chr2 157517640 157517663 -93170191 + AT_rich Low_complexity Low_complexity 1 23 0 354 91 0 0 chr2 157518177 157518232 -93169622 + (CA)n Simple_repeat Simple_repeat 2 56 0 21 0 0 0 chr2 157518252 157518273 -93169581 + AT_rich Low_complexity Low_complexity 1 21 0 705 302 69 62 chr2 157519169 157519606 -93168248 + MLT1L LTR MaLR 19 458 -157 42297 34 22 2 chr2 157519607 157525635 -93162219 + L1PA2 LINE L1 2 6155 0 330 67 0 0 chr2 157525647 157525692 -93162162 - ALR/Alpha Satellite centromeric -112 60 16 2747 220 125 41 chr2 157525782 157526832 -93161022 + L1ME1 LINE L1 4272 5536 -630 1449 226 30 24 chr2 157526832 157527204 -93160650 - MLT1A2 LTR MaLR 0 374 1 2747 220 125 41 chr2 157527204 157527834 -93160020 + L1ME1 LINE L1 5536 6112 -54 26 30 0 0 chr2 157528889 157528922 -93158932 + AT_rich Low_complexity Low_complexity 1 33 0 27 29 0 0 chr2 157529224 157529258 -93158596 + AT_rich Low_complexity Low_complexity 1 34 0 257 343 57 9 chr2 157530752 157530857 -93156997 + MIR SINE MIR 37 146 -62 1496 199 61 28 chr2 157531230 157531592 -93156262 - MLT1A2 LTR MaLR 0 374 1 396 0 0 0 chr2 157531810 157531854 -93156000 + (TG)n Simple_repeat Simple_repeat 1 44 0 3388 119 51 0 chr2 157532155 157532641 -93155213 + MER1A DNA MER1_type 19 529 0 592 268 0 0 chr2 157532716 157532858 -93154996 - Charlie1 DNA MER1_type 0 2761 2620 562 234 25 6 chr2 157532852 157533010 -93154844 - Charlie1 DNA MER1_type -2534 227 67 * 33 73 0 0 chr2 157533263 157533331 -93154523 + AT_rich Low_complexity Low_complexity 1 68 0 863 351 15 29 chr2 157533383 157533793 -93154061 + L1M3a LINE L1 1542 1945 -5541 1079 319 21 3 chr2 157534266 157534649 -93153205 + L1M3a LINE L1 1899 2288 -5277 30 45 0 0 chr2 157534649 157534693 -93153161 + AT_rich Low_complexity Low_complexity 1 44 0 429 283 33 13 chr2 157534704 157534856 -93152998 - L2 LINE L2 -1956 1358 1204 1771 142 163 39 chr2 157534894 157535275 -93152579 - MSTA LTR MaLR 0 428 1 456 176 6 132 chr2 157535308 157535467 -93152387 + Charlie4 DNA MER1_type 1823 1961 0 377 308 42 67 chr2 157535693 157536050 -93151804 - L1M4 LINE L1 -2660 3486 3139 686 241 39 25 chr2 157536066 157536269 -93151585 + MIR SINE MIR 47 252 -10 785 326 78 36 chr2 157537666 157538328 -93149526 + L1MC4a LINE L1 4737 5439 -682 1792 161 7 0 chr2 157538328 157538633 -93149221 - AluSx SINE Alu 0 307 1 785 326 78 36 chr2 157538633 157538739 -93149115 + L1MC4a LINE L1 5439 5539 -582 428 278 54 45 chr2 157538768 157539081 -93148773 + L1MC4a LINE L1 5616 5931 -1877 1137 321 90 50 chr2 157539166 157540113 -93147741 - L2 LINE L2 0 3313 2321 237 265 29 0 chr2 157540146 157540214 -93147640 - MIR SINE MIR -44 218 149 529 132 0 0 chr2 157541929 157542020 -93145834 - MER53 DNA DNA -4 185 95 783 189 61 0 chr2 157542030 157542194 -93145660 + FRAM SINE Alu 2 175 -1 23 0 0 0 chr2 157542197 157542220 -93145634 + AT_rich Low_complexity Low_complexity 1 23 0 193 365 19 19 chr2 157542777 157542884 -93144970 + MIR SINE MIR 35 141 -67 458 281 96 25 chr2 157543107 157543306 -93144548 + L1MEd LINE L1 2 214 -5905 10667 205 23 31 chr2 157543382 157543911 -93143943 - L1PA16 LINE L1 -1 6165 5633 315 0 0 0 chr2 157543911 157543946 -93143908 + (TA)n Simple_repeat Simple_repeat 2 36 0 10667 205 23 31 chr2 157543946 157545667 -93142187 - L1PA16 LINE L1 -533 5633 3899 1873 104 21 0 chr2 157545667 157545954 -93141900 - L1MA2 LINE L1 -4 6300 6008 10667 205 23 31 chr2 157545954 157546758 -93141096 - L1PA16 LINE L1 -2267 3899 3090 198 0 0 0 chr2 157546758 157546780 -93141074 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2024 98 0 4 chr2 157546783 157547058 -93140796 - AluY SINE Alu -22 289 16 10667 205 23 31 chr2 157547058 157547610 -93140244 - L1PA16 LINE L1 -3078 3088 2592 1546 204 0 4 chr2 157547611 157547891 -93139963 + AluJb SINE Alu 1 279 -33 205 39 77 19 chr2 157547895 157547947 -93139907 + (TA)n Simple_repeat Simple_repeat 2 56 0 390 246 16 63 chr2 157547950 157548076 -93139778 - L1PA16 LINE L1 -3550 2596 2477 409 270 59 20 chr2 157548681 157548833 -93139021 + MLT1J2 LTR MaLR 3 160 -290 40 21 0 0 chr2 157550206 157550253 -93137601 + AT_rich Low_complexity Low_complexity 1 47 0 1692 177 0 45 chr2 157550312 157550439 -93137415 + AluSx SINE Alu 1 132 -180 198 71 0 0 chr2 157550439 157550467 -93137387 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 1692 177 0 45 chr2 157550467 157550650 -93137204 + AluSx SINE Alu 132 297 -15 1102 265 106 7 chr2 157551263 157551565 -93136289 + MLT1G LTR MaLR 39 370 -220 500 222 105 52 chr2 157551624 157551745 -93136109 + MLT1A1 LTR MaLR 1 114 -260 5538 136 9 4 chr2 157551745 157553375 -93134479 + L1PA16 LINE L1 4521 6157 -9 500 222 105 52 chr2 157553375 157553578 -93134276 + MLT1A1 LTR MaLR 114 363 -11 1025 220 35 28 chr2 157553601 157553867 -93133987 - MLT1D LTR MaLR -16 489 246 963 229 51 16 chr2 157553971 157554224 -93133630 - MLT1D LTR MaLR -243 262 1 804 249 11 28 chr2 157554236 157554417 -93133437 - MER45A DNA AcHobo 0 178 1 590 286 62 10 chr2 157554421 157554613 -93133241 + MLT1G LTR MaLR 389 590 0 402 294 135 19 chr2 157554878 157555249 -93132605 + L1ME4a LINE L1 5616 6029 -92 282 236 58 81 chr2 157555581 157555755 -93132099 + L1MC/D LINE L1 5685 5856 -265 302 313 21 0 chr2 157555756 157555852 -93132002 + GA-rich Low_complexity Low_complexity 5 102 0 31 0 0 0 chr2 157555862 157555893 -93131961 + AT_rich Low_complexity Low_complexity 1 31 0 32 91 0 0 chr2 157555998 157556086 -93131768 + AT_rich Low_complexity Low_complexity 1 88 0 23 68 0 0 chr2 157556376 157556420 -93131434 + AT_rich Low_complexity Low_complexity 1 44 0 191 319 0 34 chr2 157557017 157557114 -93130740 + MER5B DNA MER1_type 60 164 -25 1733 166 52 0 chr2 157557732 157558022 -93129832 - AluJb SINE Alu -7 305 1 239 214 143 10 chr2 157558398 157558496 -93129358 - LTR33 LTR ERVL 0 521 411 497 286 51 29 chr2 157558534 157558709 -93129145 - LTR33 LTR ERVL -339 182 4 444 224 28 9 chr2 157558963 157559070 -93128784 - MER94 DNA DNA -20 114 6 25 51 0 0 chr2 157559201 157559240 -93128614 + AT_rich Low_complexity Low_complexity 1 39 0 6641 193 150 10 chr2 157559390 157560884 -93126970 - MER52A LTR ERV1 0 1755 53 1811 192 104 16 chr2 157561499 157562057 -93125797 - MER39 LTR ERV1 -25 682 1 506 292 83 41 chr2 157562058 157562421 -93125433 + L1 LINE L1 2797 3174 -2972 25 65 0 0 chr2 157562570 157562616 -93125238 + AT_rich Low_complexity Low_complexity 1 46 0 395 270 133 54 chr2 157562836 157563077 -93124777 + L1 LINE L1 3684 3943 -2203 2217 120 57 14 chr2 157563424 157563773 -93124081 - THE1B LTR MaLR 0 364 1 370 289 100 56 chr2 157564349 157564598 -93123256 + MIR SINE MIR 1 260 -2 4772 106 13 24 chr2 157564993 157565183 -93122671 - LTR8 LTR ERV1 0 691 500 1850 173 39 15 chr2 157565183 157565518 -93122336 + MER61A LTR ERV1 1 343 0 4772 106 13 24 chr2 157565518 157566026 -93121828 - LTR8 LTR ERV1 -191 500 1 195 100 0 0 chr2 157566790 157566820 -93121034 + (GA)n Simple_repeat Simple_repeat 1 30 0 25 31 0 0 chr2 157569141 157569173 -93118681 + AT_rich Low_complexity Low_complexity 1 32 0 3607 117 29 0 chr2 157619281 157620196 -93067658 - L1PA8A LINE L1 -407 5724 4795 933 76 8 0 chr2 157620198 157620330 -93067524 + L1P4 LINE L1 5338 5470 -691 530 75 0 32 chr2 157620330 157620424 -93067430 - L1PA12 LINE L1 0 6168 6078 267 321 68 19 chr2 157620801 157620963 -93066891 - MIR SINE MIR -47 215 46 288 261 159 11 chr2 157621144 157621232 -93066622 + MER5A DNA MER1_type 6 106 -83 255 162 55 34 chr2 157622675 157622760 -93065094 + HsTC2 DNA Tc2 10 91 -1807 25 65 0 0 chr2 157623115 157623161 -93064693 + AT_rich Low_complexity Low_complexity 1 46 0 1528 237 44 35 chr2 157623575 157624031 -93063823 + MLT1C LTR MaLR 8 467 0 499 66 0 26 chr2 157625911 157625987 -93061867 + L1PA8 LINE L1 6097 6170 -2 3498 60 0 0 chr2 157627189 157627624 -93060230 + L1PA7 LINE L1 5709 6143 -11 2061 111 7 39 chr2 157629164 157629470 -93058384 - AluSx SINE Alu -16 296 1 21 0 0 0 chr2 157629699 157629720 -93058134 + AT_rich Low_complexity Low_complexity 1 21 0 2076 114 29 10 chr2 157629721 157630027 -93057827 + AluSx SINE Alu 1 312 0 473 46 0 15 chr2 157630029 157630094 -93057760 + (GGAA)n Simple_repeat Simple_repeat 2 65 0 246 258 0 0 chr2 157630178 157630267 -93057587 + GA-rich Low_complexity Low_complexity 1 89 0 699 151 0 35 chr2 157630480 157630652 -93057202 + GA-rich Low_complexity Low_complexity 1 166 0 646 302 56 34 chr2 157630872 157631193 -93056661 - MER102a DNA MER1_type 0 330 3 676 279 91 26 chr2 157632140 157632480 -93055374 + L1MC4a LINE L1 3680 4041 -2105 454 258 44 13 chr2 157632483 157632642 -93055212 + L1MC4a LINE L1 5727 5890 -1918 370 216 0 72 chr2 157632647 157632744 -93055110 + MLT1F1 LTR MaLR 42 131 -436 1874 222 81 16 chr2 157632744 157633290 -93054564 + L1MD3 LINE L1 7410 7990 -5 427 289 132 4 chr2 157633290 157633518 -93054336 + L1MC4a LINE L1 5875 6131 -1677 1917 100 0 8 chr2 157634030 157634289 -93053565 - AluSg SINE Alu -17 293 37 283 204 122 10 chr2 157634760 157634858 -93052996 + L1MC4a LINE L1 6121 6229 -1579 937 262 62 64 chr2 157634920 157635439 -93052415 + L1MC4 LINE L1 7525 8042 0 1737 124 15 0 chr2 157636321 157636617 -93051237 + L1PA14 LINE L1 5879 6178 0 277 331 8 24 chr2 157637012 157637136 -93050718 + L1MCa LINE L1 742 863 -5553 209 299 0 23 chr2 157637993 157638080 -93049774 + GA-rich Low_complexity Low_complexity 4 88 0 6698 212 33 25 chr2 157638140 157639931 -93047923 + L1PA12 LINE L1 7 2894 -4680 5180 176 31 22 chr2 157639934 157640954 -93046900 - L1P LINE L1 -3639 2507 1479 1630 240 34 26 chr2 157640947 157641254 -93046600 + L1MCa LINE L1 2417 2720 -3706 * 2620 23 0 16 chr2 157641254 157641561 -93046293 - AluYa5 SINE Alu -9 302 1 1630 240 34 26 chr2 157641561 157641857 -93045997 + L1MCa LINE L1 2720 3025 -3401 2143 115 10 0 chr2 157641863 157642159 -93045695 + AluSg SINE Alu 1 299 -11 1105 218 25 17 chr2 157642165 157642523 -93045331 + L1MCa LINE L1 3094 3454 -2972 4093 174 17 162 chr2 157642523 157642791 -93045063 + L1P LINE L1 4125 4430 -1716 387 0 0 0 chr2 157642791 157642834 -93045020 + (CA)n Simple_repeat Simple_repeat 2 44 0 4093 174 17 162 chr2 157642834 157643994 -93043860 + L1P LINE L1 4430 5345 -801 180 0 0 0 chr2 157643994 157644014 -93043840 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 3333 122 10 11 chr2 157644023 157644546 -93043308 - L1PA10 LINE L1 0 6168 5647 7284 40 7 0 chr2 157644938 157646292 -93041562 - L1PA5 LINE L1 -8 6146 4788 7641 46 1 0 chr2 157646292 157647231 -93040623 + L1PA5 LINE L1 3843 4782 -1364 328 323 154 0 chr2 157647232 157647433 -93040421 - L1ME LINE L1 -526 5595 5364 1150 149 5 10 chr2 157647645 157647839 -93040015 + L1PA16 LINE L1 5969 6161 -5 2171 117 0 19 chr2 157648680 157648996 -93038858 - AluSx SINE Alu -2 310 1 292 320 0 0 chr2 157656475 157656550 -93031304 + L2 LINE L2 3239 3313 0 521 281 63 102 chr2 157656932 157657193 -93030661 - MLT1K LTR MaLR -10 578 308 2379 94 3 0 chr2 157657193 157657500 -93030354 - AluY SINE Alu -3 308 1 521 281 63 102 chr2 157657500 157657525 -93030329 - MLT1K LTR MaLR -280 308 284 357 24 0 0 chr2 157657525 157657567 -93030287 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 521 281 63 102 chr2 157657567 157657721 -93030133 - MLT1K LTR MaLR -304 284 154 399 366 51 14 chr2 157657713 157657929 -93029925 - MLT1K LTR MaLR -358 230 7 * 496 206 72 83 chr2 157659644 157659824 -93028030 - MIR SINE MIR -4 258 81 2470 144 12 132 chr2 157660265 157660601 -93027253 - MLT2B3 LTR ERVL 0 520 284 2581 119 6 0 chr2 157660601 157660963 -93026891 + THE1B LTR MaLR 1 364 0 2470 144 12 132 chr2 157660963 157661217 -93026637 - MLT2B3 LTR ERVL -236 284 1 250 311 131 0 chr2 157662098 157662220 -93025634 + MER91C DNA MER1_type 3 140 0 2296 99 3 0 chr2 157664599 157664901 -93022953 + AluY SINE Alu 9 311 0 2201 114 58 17 chr2 157664984 157665344 -93022510 - THE1C LTR MaLR 0 375 1 10416 112 11 35 chr2 157665344 157666963 -93020891 - THE1C-int LTR MaLR 0 1580 2 2544 102 16 13 chr2 157666964 157667338 -93020516 - THE1C LTR MaLR 0 375 1 2431 73 0 25 chr2 157667368 157667684 -93020170 - AluY SINE Alu -3 308 1 269 278 103 32 chr2 157667843 157667969 -93019885 - L2 LINE L2 0 3313 3179 24 0 0 0 chr2 157667974 157667998 -93019856 + AT_rich Low_complexity Low_complexity 1 24 0 1319 203 56 40 chr2 157668001 157668527 -93019327 + L1M3 LINE L1 4961 5489 -691 1034 270 126 3 chr2 157668531 157668857 -93018997 + L2 LINE L2 2145 2510 -804 1420 158 31 17 chr2 157668857 157669149 -93018705 - L1MB5 LINE L1 -212 5962 5667 989 117 0 0 chr2 157669150 157669295 -93018559 + AluSc SINE Alu 158 302 -7 2174 72 14 4 chr2 157669379 157669698 -93018156 + AluY SINE Alu 1 322 0 369 339 103 31 chr2 157669912 157670204 -93017650 - L3b LINE CR1 -169 1414 1102 427 237 166 84 chr2 157671193 157671632 -93016222 + MLT1H LTR MaLR 35 509 -40 701 173 113 8 chr2 157671949 157672082 -93015772 + Tigger1 DNA MER2_type 1 147 -2271 1089 146 34 10 chr2 157672086 157672291 -93015563 + Tigger1 DNA MER2_type 2209 2418 0 1527 179 41 31 chr2 157672292 157672610 -93015244 - THE1C LTR MaLR 0 375 55 1586 255 24 24 chr2 157672620 157673032 -93014822 + MLT1F LTR MaLR 131 542 0 23 0 0 0 chr2 157673065 157673088 -93014766 + AT_rich Low_complexity Low_complexity 1 23 0 267 351 30 38 chr2 157673854 157673985 -93013869 - MER5A DNA MER1_type -9 180 51 2159 119 3 3 chr2 157674133 157674436 -93013418 + AluSx SINE Alu 1 303 -9 598 212 11 34 chr2 157674437 157674616 -93013238 + L1MB8 LINE L1 2319 2493 -3653 1088 165 17 32 chr2 157674627 157674903 -93012951 + L1MB8 LINE L1 5158 5430 -743 21 0 0 0 chr2 157674903 157674924 -93012930 + AT_rich Low_complexity Low_complexity 1 21 0 3520 183 20 33 chr2 157674954 157675720 -93012134 + L1MB8 LINE L1 5423 6178 0 729 97 9 0 chr2 157676388 157676502 -93011352 - L1MA9 LINE L1 0 6312 6198 27 0 0 0 chr2 157676585 157676612 -93011242 + AT_rich Low_complexity Low_complexity 1 27 0 493 189 45 9 chr2 157676653 157676764 -93011090 - FRAM SINE Alu -2 174 60 1497 88 19 0 chr2 157677214 157677429 -93010425 - L1P5 LINE L1 -603 5548 5330 * 4785 232 22 13 chr2 157677428 157678628 -93009226 - L1 LINE L1 -1009 5137 3928 245 291 100 14 chr2 157678959 157679179 -93008675 + L1MC/D LINE L1 5583 5821 -1987 24 67 0 0 chr2 157679383 157679428 -93008426 + AT_rich Low_complexity Low_complexity 1 45 0 3665 37 7 0 chr2 157679490 157679952 -93007902 - L1P LINE L1 -800 5346 4882 4837 30 5 0 chr2 157679952 157680522 -93007332 + L1PA4 LINE L1 5576 6153 -2 662 278 48 19 chr2 157680861 157681070 -93006784 + MIR SINE MIR 6 220 -42 531 241 78 0 chr2 157681287 157681403 -93006451 - L2 LINE L2 0 3313 3189 447 291 186 0 chr2 157682574 157682811 -93005043 - L2 LINE L2 0 3313 3033 581 260 121 72 chr2 157683644 157683871 -93003983 - MLT1K LTR MaLR -36 552 297 1618 182 0 42 chr2 157683871 157684179 -93003675 - AluJo SINE Alu -15 297 3 581 260 121 72 chr2 157684179 157684340 -93003514 - MLT1K LTR MaLR -291 297 145 3697 107 11 8 chr2 157684838 157685363 -93002491 + MER1A DNA MER1_type 1 527 0 281 233 198 0 chr2 157685871 157685957 -93001897 - L3 LINE CR1 -143 1434 1332 229 182 0 0 chr2 157686002 157686035 -93001819 + AluJb SINE Alu 1 33 -270 1785 145 54 18 chr2 157686036 157686367 -93001487 - MER61A LTR ERV1 0 343 1 1620 181 0 0 chr2 157686367 157686646 -93001208 + AluJb SINE Alu 31 309 0 226 320 48 48 chr2 157686647 157686772 -93001082 - L3 LINE CR1 -493 1084 960 1863 210 57 36 chr2 157686930 157687425 -93000429 + MLT1D LTR MaLR 1 505 0 261 229 14 14 chr2 157687695 157687765 -93000089 + LTR33A LTR ERVL 452 521 -2 423 333 56 60 chr2 157687948 157688215 -92999639 - L2 LINE L2 -2 3270 3005 291 364 51 8 chr2 157688723 157688841 -92999013 + MIR3 SINE MIR 14 136 -72 198 191 0 0 chr2 157688913 157688955 -92998899 + T-rich Low_complexity Low_complexity 3 44 0 1811 162 10 0 chr2 157690366 157690674 -92997180 + L1MC1 LINE L1 6023 6333 0 291 386 25 13 chr2 157690720 157690878 -92996976 + L2 LINE L2 3154 3313 0 714 233 38 6 chr2 157691436 157691595 -92996259 + AluJo SINE Alu 113 276 -36 212 171 0 0 chr2 157693269 157693310 -92994544 + T-rich Low_complexity Low_complexity 2 42 0 613 347 29 4 chr2 157697538 157697777 -92990077 + MIR SINE MIR 18 262 0 2195 65 18 0 chr2 157698689 157699006 -92988848 + AluY SINE Alu 1 322 0 208 296 62 12 chr2 157699189 157699270 -92988584 + L2 LINE L2 3216 3300 -13 607 306 16 25 chr2 157699306 157699548 -92988306 + L2 LINE L2 1925 2164 -1150 931 298 68 10 chr2 157699574 157699866 -92987988 + L2 LINE L2 2428 2736 -578 301 266 78 23 chr2 157699913 157699926 -92987928 - L1MA9 LINE L1 0 6312 6300 3132 234 16 62 chr2 157699926 157700865 -92986989 - L1ME1 LINE L1 -19 6147 5285 7007 46 17 0 chr2 157700865 157702015 -92985839 - L1PA5 LINE L1 0 6154 4981 3132 234 16 62 chr2 157702015 157702311 -92985543 - L1ME1 LINE L1 -881 5285 4977 4828 173 25 5 chr2 157702306 157703203 -92984651 - L1MC1 LINE L1 -2 6331 5417 552 188 0 36 chr2 157703207 157703236 -92984618 - L1MA6 LINE L1 -4 6296 6267 510 79 26 0 chr2 157703236 157703312 -92984542 + MADE1 DNA Mariner 3 80 0 552 188 0 36 chr2 157703312 157703420 -92984434 - L1MA6 LINE L1 -33 6267 6164 21 0 0 0 chr2 157703534 157703555 -92984299 + AT_rich Low_complexity Low_complexity 1 21 0 753 181 21 0 chr2 157703566 157703710 -92984144 - L1MA6 LINE L1 -128 6172 6026 * 6751 221 27 39 chr2 157703706 157704048 -92983806 - L1MC1 LINE L1 -743 5403 5058 1705 42 19 0 chr2 157704048 157704261 -92983593 + L1PA3 LINE L1 5938 6154 -1 6751 221 27 39 chr2 157704261 157704790 -92983064 - L1MC1 LINE L1 -1088 5058 4524 1880 155 10 0 chr2 157704790 157705080 -92982774 - AluJb SINE Alu -19 293 1 6751 221 27 39 chr2 157705080 157706244 -92981610 - L1MC1 LINE L1 -1622 4524 3426 909 247 13 21 chr2 157706221 157706460 -92981394 - L1ME1 LINE L1 -1143 5003 4767 * 419 290 11 57 chr2 157706489 157706665 -92981189 + L2 LINE L2 3146 3313 0 324 265 26 34 chr2 157707415 157707532 -92980322 - L2 LINE L2 -1309 2005 1890 396 0 0 0 chr2 157707688 157707732 -92980122 + (TG)n Simple_repeat Simple_repeat 2 45 0 355 353 32 0 chr2 157710507 157710663 -92977191 + MER117 DNA MER1_type 4 164 -33 1199 188 114 96 chr2 157711564 157712074 -92975780 - L1ME2 LINE L1 -52 6112 5594 373 308 8 25 chr2 157712144 157712264 -92975590 - L1ME1 LINE L1 -98 6068 5951 558 233 0 0 chr2 157712276 157712379 -92975475 - L2 LINE L2 -552 2762 2660 920 262 21 18 chr2 157712397 157712679 -92975175 - L1MD2 LINE L1 -422 5937 5655 * 1297 257 63 65 chr2 157712651 157713329 -92974525 - L1MD2 LINE L1 -1939 4207 3529 1747 238 73 22 chr2 157713329 157713820 -92974034 + LTR40a LTR ERVL 3 518 -1 1297 257 63 65 chr2 157713820 157713838 -92974016 - L1MD2 LINE L1 -2617 3529 3512 1826 283 144 42 chr2 157713945 157715180 -92972674 - L2 LINE L2 -1 3312 1954 867 321 40 28 chr2 157715258 157715579 -92972275 + LTR16C LTR ERVL 93 417 -74 2445 292 111 22 chr2 157715650 157716707 -92971147 - L2 LINE L2 -1352 1962 812 701 217 49 0 chr2 157716707 157716850 -92971004 - MER58A DNA MER1_type -38 186 37 5309 195 40 9 chr2 157716994 157718222 -92969632 + L1MC1 LINE L1 4375 5699 -634 1644 218 37 8 chr2 157718222 157718575 -92969279 - MLT1A1 LTR MaLR 0 365 3 5309 195 40 9 chr2 157718575 157719231 -92968623 + L1MC1 LINE L1 5699 6333 0 579 307 41 4 chr2 157719276 157719520 -92968334 - L2 LINE L2 -2498 816 564 23 33 0 0 chr2 157720421 157720451 -92967403 + AT_rich Low_complexity Low_complexity 1 30 0 1203 183 0 19 chr2 157720741 157721045 -92966809 + MLT1A1 LTR MaLR 1 365 0 23 33 0 0 chr2 157721405 157721435 -92966419 + AT_rich Low_complexity Low_complexity 1 30 0 405 255 0 35 chr2 157722357 157722498 -92965356 - MER103 DNA DNA -9 157 22 398 302 213 19 chr2 157723152 157723420 -92964434 + L2 LINE L2 2577 2896 -418 3180 236 69 14 chr2 157723480 157724467 -92963387 + L1PBa LINE L1 6 1046 -5817 8569 165 33 6 chr2 157724470 157727217 -92960637 + L1PBa LINE L1 1093 4057 -2805 252 0 0 0 chr2 157727348 157727376 -92960478 + (TA)n Simple_repeat Simple_repeat 1 28 0 2100 153 3 0 chr2 157727379 157727732 -92960122 + L1PB1 LINE L1 5794 6147 -4 724 257 31 109 chr2 157727735 157728093 -92959761 + L2 LINE L2 2984 3313 0 189 0 0 0 chr2 157728734 157728755 -92959099 + (CAAAC)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr2 157729284 157729305 -92958549 + AT_rich Low_complexity Low_complexity 1 21 0 1010 183 11 0 chr2 157729423 157729603 -92958251 - L1 LINE L1 -2022 4124 3943 22 0 0 0 chr2 157729609 157729631 -92958223 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 157729642 157729664 -92958190 + AT_rich Low_complexity Low_complexity 1 22 0 227 265 47 77 chr2 157729872 157730106 -92957748 - L1ME4a LINE L1 -41 6080 5854 206 346 53 15 chr2 157730826 157730959 -92956895 + MIR SINE MIR 93 230 -32 808 249 89 58 chr2 157731130 157731154 -92956700 - MLT1I LTR MaLR 0 409 387 545 258 144 12 chr2 157731154 157731321 -92956533 + MER5A DNA MER1_type 1 189 0 808 249 89 58 chr2 157731321 157731622 -92956232 - MLT1I LTR MaLR -22 387 74 180 0 0 0 chr2 157732307 157732327 -92955527 + (T)n Simple_repeat Simple_repeat 1 20 0 238 281 58 41 chr2 157732486 157732607 -92955247 - MIR SINE MIR -83 179 57 310 354 46 11 chr2 157732608 157732783 -92955071 + MIR SINE MIR 82 262 0 672 243 88 80 chr2 157732966 157733217 -92954637 + MIR SINE MIR 10 262 0 405 0 0 0 chr2 157733263 157733308 -92954546 + (CA)n Simple_repeat Simple_repeat 1 45 0 22 35 0 0 chr2 157735265 157735294 -92952560 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 157736785 157736814 -92951040 + AT_rich Low_complexity Low_complexity 1 29 0 240 239 0 42 chr2 157738806 157738877 -92948977 + CT-rich Low_complexity Low_complexity 4 71 0 187 336 0 65 chr2 157741512 157741619 -92946235 + L2 LINE L2 2661 2760 -554 261 0 0 0 chr2 157741780 157741809 -92946045 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2053 111 7 0 chr2 157741812 157742092 -92945762 - AluSp SINE Alu -31 282 1 275 351 57 73 chr2 157742577 157742825 -92945029 + L2 LINE L2 2845 3088 -184 341 239 0 0 chr2 157742863 157742930 -92944924 + L2 LINE L2 3201 3267 -5 30 0 0 0 chr2 157744445 157744475 -92943379 + AT_rich Low_complexity Low_complexity 1 30 0 180 179 0 0 chr2 157745447 157745486 -92942368 + CT-rich Low_complexity Low_complexity 4 42 0 206 261 43 0 chr2 157746155 157746201 -92941653 + MIR SINE MIR 53 100 -108 243 0 0 0 chr2 157747630 157747657 -92940197 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 267 114 0 0 chr2 157748427 157748471 -92939383 + (CA)n Simple_repeat Simple_repeat 2 45 0 2254 191 51 0 chr2 157749669 157750098 -92937756 + MLT1C LTR MaLR 1 451 -16 821 285 66 41 chr2 157750421 157750832 -92937022 - LTR33A LTR ERVL -50 473 53 566 289 30 88 chr2 157750962 157751225 -92936629 - MIR SINE MIR -6 256 9 1784 141 0 72 chr2 157751454 157751806 -92936048 + AluSx SINE Alu 1 330 0 5672 162 24 11 chr2 157751806 157752843 -92935011 - L1MC1 LINE L1 -11 6322 5272 843 212 17 55 chr2 157752945 157753238 -92934616 - L1MC1 LINE L1 -1127 5019 4738 15823 163 110 34 chr2 157753243 157753463 -92934391 - L1P3 LINE L1 -1737 4724 4522 2452 88 38 0 chr2 157753463 157753802 -92934052 + THE1A LTR MaLR 1 352 -3 15823 163 110 34 chr2 157753802 157757223 -92930631 - L1P3 LINE L1 -1939 4522 771 2678 175 28 4 chr2 157757223 157757719 -92930135 - L1P3 LINE L1 -5367 508 1 3161 159 22 5 chr2 157757719 157758579 -92929275 - L1P4 LINE L1 -391 5775 4903 2101 125 54 0 chr2 157758583 157758936 -92928918 - L1PA13 LINE L1 -15 6148 5777 183 204 0 0 chr2 157761905 157761949 -92925905 + (TA)n Simple_repeat Simple_repeat 2 45 0 748 266 15 75 chr2 157764118 157764385 -92923469 - MIR SINE MIR 0 262 12 27 73 0 0 chr2 157765832 157765887 -92921967 + AT_rich Low_complexity Low_complexity 1 55 0 302 306 24 0 chr2 157766830 157766915 -92920939 + MIR3 SINE MIR 90 176 -32 344 277 157 24 chr2 157767900 157768066 -92919788 - MIR3 SINE MIR -1 207 20 199 337 24 0 chr2 157768090 157768173 -92919681 - MIR3 SINE MIR -5 203 119 464 348 11 16 chr2 157768926 157769113 -92918741 - L2 LINE L2 -259 3054 2869 3166 173 24 0 chr2 157769121 157769715 -92918139 - L1PA13 LINE L1 -771 5375 4768 * 5791 69 23 0 chr2 157769711 157770490 -92917364 + L1PA13 LINE L1 5366 6162 -1 250 116 319 14 chr2 157771768 157771837 -92916017 + MER99 DNA DNA 2 91 -737 36 53 0 0 chr2 157771945 157772002 -92915852 + AT_rich Low_complexity Low_complexity 1 57 0 26 88 0 0 chr2 157772041 157772109 -92915745 + AT_rich Low_complexity Low_complexity 1 68 0 30 0 0 0 chr2 157772142 157772172 -92915682 + AT_rich Low_complexity Low_complexity 1 30 0 2912 197 49 15 chr2 157772544 157772832 -92915022 + MER99 DNA DNA 192 469 -359 393 39 0 0 chr2 157772832 157772883 -92914971 + (CA)n Simple_repeat Simple_repeat 1 51 0 2912 197 49 15 chr2 157772883 157773209 -92914645 + MER99 DNA DNA 469 827 -1 246 263 0 0 chr2 157773286 157773343 -92914511 + (TA)n Simple_repeat Simple_repeat 2 58 0 606 254 11 40 chr2 157774343 157774520 -92913334 - MER5B DNA MER1_type -1 177 6 1466 173 10 62 chr2 157774656 157774963 -92912891 - MER47A DNA MER2_type -75 291 1 1850 163 0 25 chr2 157775093 157775413 -92912441 - AluSx SINE Alu 0 312 1 534 316 18 18 chr2 157775647 157775919 -92911935 + L1PBa LINE L1 101 372 -6491 1505 191 40 10 chr2 157776272 157776571 -92911283 + AluJo SINE Alu 3 310 -2 22 0 0 0 chr2 157777324 157777346 -92910508 + AT_rich Low_complexity Low_complexity 1 22 0 2218 112 0 3 chr2 157780097 157780393 -92907461 + AluSx SINE Alu 9 303 -9 1970 109 0 0 chr2 157780467 157780723 -92907131 + AluSx SINE Alu 37 292 -20 189 0 0 0 chr2 157780723 157780744 -92907110 + (GA)n Simple_repeat Simple_repeat 2 22 0 420 278 15 5 chr2 157781280 157781439 -92906415 + MLT1J2 LTR MaLR 62 222 -224 711 235 118 11 chr2 157781464 157781651 -92906203 + MER20 DNA MER1_type 12 218 -1 268 298 19 19 chr2 157781694 157781798 -92906056 + MLT1J1 LTR MaLR 287 390 -56 24 32 0 0 chr2 157782205 157782236 -92905618 + GC_rich Low_complexity Low_complexity 1 31 0 5861 181 8 4 chr2 157784705 157785796 -92902058 - L1P LINE L1 -3611 2535 1440 1479 119 75 17 chr2 157785808 157786101 -92901753 - L1M1 LINE L1 -4425 3140 2831 1584 63 0 10 chr2 157786105 157786312 -92901542 + AluYa5 SINE Alu 98 302 -9 423 0 0 0 chr2 157786981 157787028 -92900826 + (CA)n Simple_repeat Simple_repeat 2 48 0 1276 55 6 0 chr2 157788918 157789083 -92898771 - L1PA5 LINE L1 0 6154 5989 9647 112 65 1 chr2 157789591 157791152 -92896702 - L1PBa LINE L1 -3942 2921 1261 843 251 19 5 chr2 157791692 157791907 -92895947 - MER20 DNA MER1_type -1 218 1 437 368 57 41 chr2 157792172 157792631 -92895223 - L2 LINE L2 0 3272 2807 516 188 83 49 chr2 157792753 157792793 -92895061 - MLT2B1 LTR ERVL 0 520 483 459 0 0 0 chr2 157792793 157792844 -92895010 + (TG)n Simple_repeat Simple_repeat 1 51 0 516 188 83 49 chr2 157792844 157792947 -92894907 - MLT2B1 LTR ERVL -37 483 372 946 217 0 20 chr2 157792949 157793152 -92894702 - MLT2B1 LTR ERVL -321 199 1 1931 139 3 22 chr2 157794715 157795031 -92892823 + AluSx SINE Alu 1 310 -2 1150 149 5 10 chr2 157795871 157796065 -92891789 - L1PA16 LINE L1 -5 6161 5969 1761 158 10 17 chr2 157796363 157796654 -92891200 + AluJo SINE Alu 6 294 -18 212 415 34 0 chr2 157796758 157796876 -92890978 - L3 LINE CR1 -1271 306 185 236 53 26 0 chr2 157798004 157798042 -92889812 + (TA)n Simple_repeat Simple_repeat 1 39 0 886 246 93 20 chr2 157798479 157798832 -92889022 + L1ME3A LINE L1 5787 6165 -5 2021 94 12 76 chr2 157798914 157799243 -92888611 - AluSx SINE Alu -4 308 1 358 264 243 0 chr2 157799398 157799538 -92888316 + L1ME LINE L1 5484 5657 -464 21 0 0 0 chr2 157799691 157799712 -92888142 + AT_rich Low_complexity Low_complexity 1 21 0 314 329 29 15 chr2 157800306 157800443 -92887411 - L3b LINE CR1 -232 1351 1213 185 218 146 0 chr2 157800515 157800570 -92887284 + L2 LINE L2 3003 3065 -207 2116 140 0 0 chr2 157801068 157801361 -92886493 + AluSx SINE Alu 1 293 -19 22 35 0 0 chr2 157802208 157802237 -92885617 + AT_rich Low_complexity Low_complexity 1 29 0 288 228 17 39 chr2 157805290 157805470 -92882384 + GA-rich Low_complexity Low_complexity 3 178 0 3420 197 49 85 chr2 157805791 157806906 -92880948 - L1MDa LINE L1 -4401 2139 1065 21 36 0 0 chr2 157807385 157807413 -92880441 + AT_rich Low_complexity Low_complexity 1 28 0 227 196 20 0 chr2 157808484 157808535 -92879319 - MIR3 SINE MIR -38 170 119 703 251 148 5 chr2 157808976 157809256 -92878598 + L1ME4a LINE L1 5528 5849 -272 30 0 0 0 chr2 157809474 157809504 -92878350 + AT_rich Low_complexity Low_complexity 1 30 0 185 150 0 25 chr2 157809869 157809909 -92877945 + (CA)n Simple_repeat Simple_repeat 2 40 0 28 71 0 0 chr2 157810004 157810060 -92877794 + AT_rich Low_complexity Low_complexity 1 56 0 27 0 0 0 chr2 157811287 157811314 -92876540 + AT_rich Low_complexity Low_complexity 1 27 0 337 231 67 114 chr2 157811952 157812138 -92875716 - L1ME3A LINE L1 -3 6159 5987 1706 155 3 45 chr2 157812138 157812448 -92875406 - AluSx SINE Alu -15 297 1 337 231 67 114 chr2 157812448 157812489 -92875365 - L1ME3A LINE L1 -175 5987 5946 333 0 0 0 chr2 157812489 157812526 -92875328 + (TA)n Simple_repeat Simple_repeat 1 37 0 226 109 22 0 chr2 157812556 157812602 -92875252 - L1 LINE L1 -1801 4345 4299 255 93 0 0 chr2 157812617 157812660 -92875194 + (TA)n Simple_repeat Simple_repeat 2 44 0 2059 126 3 3 chr2 157812660 157812946 -92874908 - AluSg SINE Alu -24 286 1 1454 247 65 39 chr2 157812956 157813446 -92874408 - L1ME3A LINE L1 -230 5940 5438 17123 197 20 13 chr2 157813451 157815209 -92872645 - L1PA15 LINE L1 -4 6812 5067 194 0 39 0 chr2 157815209 157815235 -92872619 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 17123 197 20 13 chr2 157815235 157817266 -92870588 - L1PA15 LINE L1 -1749 5067 2984 2004 157 3 0 chr2 157817266 157817572 -92870282 + AluSq SINE Alu 1 307 -6 17123 197 20 13 chr2 157817572 157818586 -92869268 - L1PA15 LINE L1 -3832 2984 1978 366 290 13 19 chr2 157818737 157818892 -92868962 - L1ME3A LINE L1 -808 5338 5185 23 0 0 0 chr2 157818897 157818920 -92868934 + AT_rich Low_complexity Low_complexity 1 23 0 3961 219 10 75 chr2 157819642 157821231 -92866623 + L1PA12 LINE L1 2029 3451 -4133 243 0 0 0 chr2 157821231 157821258 -92866596 + (TC)n Simple_repeat Simple_repeat 1 27 0 3961 219 10 75 chr2 157821258 157821735 -92866119 + L1PA12 LINE L1 3451 3957 -3627 814 254 173 26 chr2 157821799 157822141 -92865713 + MLT1I LTR MaLR 16 407 -2 1668 205 26 17 chr2 157822160 157822511 -92865343 + MLT1A1 LTR MaLR 11 364 -1 2530 187 48 37 chr2 157823420 157823982 -92863872 + L1 LINE L1 17 584 -6981 * 5311 115 56 19 chr2 157823961 157824634 -92863220 + L1 LINE L1 2136 2857 -4708 1994 0 0 0 chr2 157824634 157824847 -92863007 - AluYa5 SINE Alu -1 310 98 5311 115 56 19 chr2 157824847 157825142 -92862712 + L1 LINE L1 2857 3140 -4425 21508 166 10 9 chr2 157825154 157829176 -92858678 + L1PA11 LINE L1 1440 5465 -709 535 157 0 0 chr2 157829179 157829262 -92858592 - AluSg/x SINE Alu -14 296 214 4707 105 8 24 chr2 157829264 157829987 -92857867 + L1PA11 LINE L1 5460 6171 -3 4502 199 28 1 chr2 157829992 157830924 -92856930 + L1 LINE L1 4688 5644 -1921 1631 233 71 27 chr2 157830924 157831593 -92856261 + L1MB7 LINE L1 3811 4560 -3005 2331 234 52 34 chr2 157831597 157832423 -92855431 + L1MB7 LINE L1 4820 5660 -1905 33 25 0 0 chr2 157832423 157832463 -92855391 + AT_rich Low_complexity Low_complexity 1 40 0 2146 236 56 11 chr2 157832512 157833135 -92854719 + L1MB7 LINE L1 5971 6621 -944 17531 157 35 4 chr2 157833146 157837382 -92850472 + L1PBa LINE L1 1 4370 -2492 182 175 0 35 chr2 157837465 157837522 -92850332 + C-rich Low_complexity Low_complexity 4 58 0 183 80 0 0 chr2 157839024 157839049 -92848805 + (A)n Simple_repeat Simple_repeat 1 25 0 316 246 152 64 chr2 157840052 157840282 -92847572 + L1PB1 LINE L1 528 1392 -5457 327 318 39 16 chr2 157840395 157840524 -92847330 - L2 LINE L2 0 3313 3182 619 171 0 0 chr2 157841971 157842076 -92845778 + L1PB1 LINE L1 4463 4567 -2281 * 6950 157 26 11 chr2 157842075 157844367 -92843487 + L1PB1 LINE L1 4527 6848 -5 3793 167 86 54 chr2 157844375 157844454 -92843400 + L1MB7 LINE L1 6608 6683 -920 490 110 0 37 chr2 157844454 157844536 -92843318 - MADE1 DNA Mariner -1 79 1 3793 167 86 54 chr2 157844536 157844721 -92843133 + L1MB7 LINE L1 6683 6861 -742 2149 135 0 0 chr2 157844721 157845018 -92842836 + AluSx SINE Alu 1 297 -15 3793 167 86 54 chr2 157845018 157845718 -92842136 + L1MB7 LINE L1 6861 7603 0 228 377 0 0 chr2 157845747 157845885 -92841969 - L1M4 LINE L1 -2287 3859 3722 233 182 45 0 chr2 157845908 157845952 -92841902 - MLT1B LTR MaLR 0 390 345 629 199 91 11 chr2 157845978 157846154 -92841700 + L1M4 LINE L1 4549 4738 -1408 1690 196 22 52 chr2 157846157 157846559 -92841295 - MLT1B LTR MaLR 0 390 1 35 41 0 0 chr2 157846932 157846981 -92840873 + AT_rich Low_complexity Low_complexity 1 49 0 464 324 98 12 chr2 157846993 157847413 -92840441 - L1ME LINE L1 -304 5817 5362 670 249 12 24 chr2 157847775 157847944 -92839910 - LTR67 LTR ERVL -7 550 384 586 294 82 0 chr2 157848412 157848582 -92839272 + MIR SINE MIR 8 191 -71 518 172 50 0 chr2 157849118 157849217 -92838637 - MLT1D LTR MaLR -5 500 397 499 185 11 0 chr2 157849297 157849389 -92838465 - LTR67 LTR ERVL -8 549 457 1330 211 100 30 chr2 157849395 157849765 -92838089 - MLT1D LTR MaLR -109 396 1 24 32 0 0 chr2 157849841 157849872 -92837982 + AT_rich Low_complexity Low_complexity 1 31 0 5225 140 60 9 chr2 157849874 157850823 -92837031 - L1MA4 LINE L1 -4 6296 5295 210 37 0 0 chr2 157850823 157850850 -92837004 + (TTA)n Simple_repeat Simple_repeat 2 28 0 5225 140 60 9 chr2 157850850 157850872 -92836982 - L1MA4 LINE L1 -1005 5295 5276 2148 129 3 3 chr2 157850910 157851213 -92836641 - AluSx SINE Alu -9 303 1 26 64 0 0 chr2 157851687 157851734 -92836120 + AT_rich Low_complexity Low_complexity 1 47 0 29 0 0 0 chr2 157851839 157851868 -92835986 + AT_rich Low_complexity Low_complexity 1 29 0 2287 102 3 0 chr2 157851930 157852225 -92835629 + AluSx SINE Alu 2 297 -15 2119 106 17 3 chr2 157853471 157853763 -92834091 - AluSq SINE Alu -17 296 1 316 248 50 58 chr2 157854271 157854392 -92833462 + L1MC5 LINE L1 7812 7931 -30 194 311 0 0 chr2 157855107 157855152 -92832702 + MIR SINE MIR 120 164 -98 180 0 0 0 chr2 157855920 157855940 -92831914 + (T)n Simple_repeat Simple_repeat 1 20 0 890 332 59 81 chr2 157855980 157856793 -92831061 + L3 LINE CR1 404 1198 -379 320 290 105 16 chr2 157856908 157857032 -92830822 - L2 LINE L2 0 3313 3179 241 380 60 7 chr2 157857215 157857365 -92830489 + L3 LINE CR1 1327 1484 -93 298 304 68 50 chr2 157857560 157857721 -92830133 - MER5B DNA MER1_type -14 164 1 248 323 15 0 chr2 157857721 157857769 -92830085 + L3b LINE CR1 1531 1579 -4 1547 228 33 63 chr2 157858256 157858359 -92829495 - MLT1D LTR MaLR 0 505 400 2289 104 3 0 chr2 157858359 157858657 -92829197 + AluSg SINE Alu 1 299 -11 1547 228 33 63 chr2 157858657 157859074 -92828780 - MLT1D LTR MaLR -105 400 1 2525 111 11 3 chr2 157859320 157859681 -92828173 + THE1B LTR MaLR 1 364 0 518 174 0 0 chr2 157860070 157860162 -92827692 + AluJb SINE Alu 213 304 -8 286 276 141 25 chr2 157860321 157860520 -92827334 + L2 LINE L2 3080 3301 -12 2374 69 0 3 chr2 157860524 157860815 -92827039 + AluY SINE Alu 1 290 -21 1570 146 32 0 chr2 157861047 157861293 -92826561 + AluSx SINE Alu 11 264 -48 586 318 123 28 chr2 157861469 157861941 -92825913 + L1MB3 LINE L1 5384 5900 -283 3597 142 19 27 chr2 157862354 157863025 -92824829 + L1PA5 LINE L1 4660 5325 -821 42654 34 22 2 chr2 157863027 157869080 -92818774 + L1PA2 LINE L1 2 6155 0 1984 131 3 0 chr2 157869113 157869396 -92818458 + AluSx SINE Alu 1 284 -28 3623 179 24 87 chr2 157869434 157870323 -92817531 + L1PA5 LINE L1 5318 6150 -4 25 0 0 0 chr2 157870326 157870351 -92817503 + AT_rich Low_complexity Low_complexity 1 25 0 1146 238 114 68 chr2 157870468 157870685 -92817169 + L1MC4 LINE L1 7382 7588 -454 1600 194 24 24 chr2 157870685 157870863 -92816991 + MER58B DNA MER1_type 1 181 -2239 2250 98 0 33 chr2 157870863 157871170 -92816684 + AluSq SINE Alu 1 297 -16 1600 194 24 24 chr2 157871170 157871331 -92816523 + MER58B DNA MER1_type 180 340 -1 1146 238 114 68 chr2 157871331 157871744 -92816110 + L1MC4 LINE L1 7588 8041 -1 805 303 124 57 chr2 157871896 157872200 -92815654 + L2 LINE L2 2424 2706 -607 2158 122 3 26 chr2 157872200 157872543 -92815311 - MER1B DNA MER1_type 0 337 3 805 303 124 57 chr2 157872543 157873035 -92814819 + L2 LINE L2 2706 3306 -7 427 315 23 8 chr2 157873019 157873149 -92814705 - L2 LINE L2 0 3313 3182 * 190 270 127 0 chr2 157874781 157874844 -92813010 + L3 LINE CR1 284 354 -1223 278 336 114 0 chr2 157874897 157875037 -92812817 + L3 LINE CR1 355 510 -1067 1893 151 3 0 chr2 157875422 157875720 -92812134 - AluJb SINE Alu -13 299 1 687 143 0 0 chr2 157875879 157875977 -92811877 - FRAM SINE Alu -20 156 59 320 286 75 8 chr2 157875987 157876120 -92811734 - MIR SINE MIR 0 262 121 374 258 23 47 chr2 157878425 157878553 -92809301 - MIR SINE MIR -59 203 79 692 240 28 23 chr2 157878853 157879070 -92808784 - L1M4 LINE L1 -1581 4565 4348 2582 43 0 10 chr2 157879386 157879688 -92808166 + AluY SINE Alu 1 299 -12 222 150 0 0 chr2 157879712 157879752 -92808102 + (A)n Simple_repeat Simple_repeat 1 40 0 277 320 90 0 chr2 157880626 157880748 -92807106 - MIR SINE MIR -10 252 120 468 278 53 62 chr2 157880931 157881140 -92806714 - MIR SINE MIR -31 231 25 412 266 28 9 chr2 157881214 157881323 -92806531 + MIR SINE MIR 40 150 -58 315 311 156 0 chr2 157882236 157882416 -92805438 + MIR SINE MIR 42 249 -13 279 179 263 11 chr2 157882420 157882515 -92805339 + L1ME1 LINE L1 6043 6161 -5 284 355 35 7 chr2 157882664 157882805 -92805049 - LTR67 LTR ERVL -299 258 114 836 260 71 26 chr2 157883120 157883470 -92804384 + L1ME4a LINE L1 5490 5855 -266 336 222 0 14 chr2 157883937 157884009 -92803845 - MIR SINE MIR -6 256 186 22 0 0 0 chr2 157884372 157884394 -92803460 + AT_rich Low_complexity Low_complexity 1 22 0 651 304 49 20 chr2 157885215 157885462 -92802392 - L3 LINE CR1 -1 1576 1323 470 300 131 54 chr2 157885605 157885918 -92801936 - L3 LINE CR1 -258 1319 983 674 223 16 21 chr2 157886711 157886899 -92800955 + MER53 DNA DNA 1 187 -2 219 204 0 0 chr2 157886922 157886971 -92800883 + CT-rich Low_complexity Low_complexity 3 51 0 2015 235 38 38 chr2 157887321 157887951 -92799903 + L1ME1 LINE L1 5519 6148 -18 285 303 53 68 chr2 157889209 157889341 -92798513 - L2 LINE L2 -5 3267 3138 2548 171 34 13 chr2 157889435 157889902 -92797952 + L1PA16 LINE L1 5666 6142 -24 23 86 0 0 chr2 157890788 157890846 -92797008 + AT_rich Low_complexity Low_complexity 1 58 0 23 0 0 0 chr2 157891700 157891723 -92796131 + AT_rich Low_complexity Low_complexity 1 23 0 2215 55 0 17 chr2 157892201 157892493 -92795361 - L1PA5 LINE L1 -4 6150 5864 480 262 35 21 chr2 157892677 157892822 -92795032 + L2 LINE L2 3166 3312 -1 246 313 0 0 chr2 157893010 157893074 -92794780 + L2 LINE L2 3208 3271 -1 1001 183 10 0 chr2 157893891 157894099 -92793755 - L1MA6 LINE L1 0 6300 6091 223 258 45 0 chr2 157894650 157894716 -92793138 - MIR3 SINE MIR -7 201 133 187 313 52 43 chr2 157894933 157895048 -92792806 + MIR SINE MIR 81 196 -66 416 231 157 0 chr2 157895313 157895421 -92792433 + L2 LINE L2 3188 3312 -1 334 246 56 32 chr2 157895584 157895710 -92792144 - MIR SINE MIR -58 204 76 2283 103 0 0 chr2 157895729 157896020 -92791834 - AluSq SINE Alu -21 292 2 3741 211 47 30 chr2 157897437 157898604 -92789250 - L1MB7 LINE L1 0 6184 5039 315 0 0 0 chr2 157898604 157898639 -92789215 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2037 130 0 0 chr2 157898642 157898918 -92788936 - AluSx SINE Alu -31 281 6 3741 211 47 30 chr2 157898918 157899683 -92788171 - L1MB7 LINE L1 -1146 5038 4217 250 340 9 19 chr2 157899824 157899930 -92787924 - L1M4 LINE L1 -5672 1183 1079 429 272 116 17 chr2 157900281 157900454 -92787400 - L1M4 LINE L1 -6599 260 71 909 206 57 14 chr2 157900958 157901167 -92786687 + MER20 DNA MER1_type 2 219 0 813 135 8 29 chr2 157901221 157901460 -92786394 + MER1B DNA MER1_type 1 339 0 2863 203 42 84 chr2 157901571 157901662 -92786192 - MER69 DNA AcHobo -3 2523 2430 279 0 0 0 chr2 157901662 157901693 -92786161 + (TCTCCC)n Simple_repeat Simple_repeat 3 33 0 6717 89 38 23 chr2 157901693 157902025 -92785829 + SVA Other Other 53 1386 -991 6717 97 40 30 chr2 157902025 157903129 -92784725 + SVA Other Other 272 1386 0 2863 203 42 84 chr2 157903129 157903333 -92784521 - MER69 DNA AcHobo -95 2431 2220 1485 161 8 8 chr2 157903333 157903588 -92784266 - AluJb SINE Alu -8 304 50 417 39 0 0 chr2 157903588 157903639 -92784215 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1810 102 75 0 chr2 157903640 157903895 -92783959 - AluSc SINE Alu -30 279 6 2863 203 42 84 chr2 157903895 157904556 -92783298 - MER69 DNA AcHobo -305 2221 1609 1718 175 7 0 chr2 157904556 157904881 -92782973 - AluJb SINE Alu 0 327 1 2863 203 42 84 chr2 157904881 157905008 -92782846 - MER69 DNA AcHobo -917 1609 1478 529 253 22 0 chr2 157905021 157905162 -92782692 - MER69 DNA AcHobo -1077 149 2 734 274 98 5 chr2 157905163 157905378 -92782476 - LTR33 LTR ERVL -277 244 10 195 348 133 27 chr2 157906892 157907185 -92780669 + L2 LINE L2 2468 2791 -523 541 204 57 102 chr2 157907600 157907776 -92780078 - MER5A DNA MER1_type -21 168 1 285 257 40 0 chr2 157908067 157908141 -92779713 + MIR SINE MIR 84 160 -102 647 203 20 180 chr2 157908672 157909022 -92778832 - MLT1G LTR MaLR -57 533 240 1789 184 113 3 chr2 157909176 157909502 -92778352 + MLT1A1 LTR MaLR 4 365 0 1411 187 4 50 chr2 157909618 157909896 -92777958 + AluJb SINE Alu 14 278 -34 26 0 0 0 chr2 157909897 157909923 -92777931 + AT_rich Low_complexity Low_complexity 1 26 0 720 272 76 27 chr2 157909941 157910165 -92777689 + MIR SINE MIR 22 256 -6 356 286 167 0 chr2 157910448 157910574 -92777280 + L2 LINE L2 3121 3267 -5 21 0 0 0 chr2 157912169 157912190 -92775664 + AT_rich Low_complexity Low_complexity 1 21 0 1947 107 33 0 chr2 157912309 157912630 -92775224 + AluY SINE Alu 3 332 0 6989 76 6 13 chr2 157912781 157913727 -92774127 + L1PA8 LINE L1 5216 6154 -18 834 216 6 6 chr2 157913872 157914034 -92773820 - MER45A DNA AcHobo 0 178 17 381 159 0 0 chr2 157914997 157915066 -92772788 + L1M3 LINE L1 4566 4634 -1512 1185 120 0 6 chr2 157915078 157915253 -92772601 + AluSg/x SINE Alu 137 310 -2 3187 159 43 78 chr2 157915261 157915437 -92772417 + L1M3 LINE L1 4639 4820 -1348 2055 141 0 10 chr2 157915437 157915743 -92772111 + AluSx SINE Alu 1 303 -9 3187 159 43 78 chr2 157915743 157916538 -92771316 + L1M3 LINE L1 4820 5563 -605 851 211 6 0 chr2 157916542 157916703 -92771151 + FRAM SINE Alu 2 163 -13 1048 75 5 43 chr2 157916703 157916889 -92770965 + (GGAGA)n Simple_repeat Simple_repeat 1 179 0 340 233 0 0 chr2 157916989 157917075 -92770779 + HAL1 LINE L1 2253 2338 -169 252 272 15 52 chr2 157917081 157917217 -92770637 + HAL1 LINE L1 2376 2506 -1 181 287 80 67 chr2 157917366 157917516 -92770338 + L2 LINE L2 2635 2786 -528 1414 205 98 41 chr2 157917523 157917889 -92769965 - MSTD LTR MaLR 0 396 10 203 295 54 62 chr2 157918114 157918226 -92769628 + L2 LINE L2 3112 3222 -50 585 216 101 0 chr2 157918430 157918578 -92769276 - MIR SINE MIR -37 225 63 1716 146 204 22 chr2 157918610 157918972 -92768882 - MSTA LTR MaLR 0 428 1 28 29 0 0 chr2 157921008 157921043 -92766811 + AT_rich Low_complexity Low_complexity 1 35 0 384 246 14 56 chr2 157922581 157922723 -92765131 - L3b LINE CR1 -346 1237 1102 23 0 0 0 chr2 157926222 157926245 -92761609 + AT_rich Low_complexity Low_complexity 1 23 0 325 250 108 40 chr2 157926969 157927117 -92760737 + MIR SINE MIR 48 205 -57 1406 113 158 63 chr2 157928079 157928397 -92759457 + AluSx SINE Alu 1 345 0 441 221 28 94 chr2 157928539 157928720 -92759134 + MER112 DNA MER1_type 91 259 -1 180 0 0 0 chr2 157931675 157931695 -92756159 + (CA)n Simple_repeat Simple_repeat 1 20 0 300 70 0 0 chr2 157934684 157934727 -92753127 + (TG)n Simple_repeat Simple_repeat 2 44 0 339 320 7 31 chr2 157935912 157936079 -92751775 + CT-rich Low_complexity Low_complexity 5 280 0 186 209 0 0 chr2 157938032 157938075 -92749779 + T-rich Low_complexity Low_complexity 1 43 0 183 80 0 0 chr2 157942298 157942323 -92745531 + (T)n Simple_repeat Simple_repeat 1 25 0 201 175 0 0 chr2 157943808 157943848 -92744006 + (CTG)n Simple_repeat Simple_repeat 2 41 0 37 0 0 0 chr2 157944690 157944727 -92743127 + AT_rich Low_complexity Low_complexity 1 37 0 453 19 0 0 chr2 157945112 157945166 -92742688 + (CA)n Simple_repeat Simple_repeat 1 54 0 301 298 20 110 chr2 157951637 157951892 -92735962 - L1M2 LINE L1 -6069 780 549 226 330 112 48 chr2 157952969 157953157 -92734697 + MIR3 SINE MIR 3 202 -6 526 255 70 69 chr2 157954942 157955370 -92732484 + LTR33A LTR ERVL 3 515 -8 546 305 81 14 chr2 157956463 157956686 -92731168 + MLT1K LTR MaLR 351 588 0 1787 179 0 16 chr2 157957180 157957512 -92730342 - AluJb SINE Alu 0 312 1 183 310 35 52 chr2 157957641 157957699 -92730155 + L2 LINE L2 3122 3178 -94 372 36 72 24 chr2 157958692 157958775 -92729079 + (TTTA)n Simple_repeat Simple_repeat 2 88 0 2870 118 88 101 chr2 157959068 157959602 -92728252 + MER1A DNA MER1_type 1 527 0 1643 138 34 8 chr2 157960063 157960355 -92727499 + AluJb SINE Alu 9 307 0 610 278 114 11 chr2 157961786 157962059 -92725795 - L1MC4a LINE L1 -1916 5892 5592 336 64 0 0 chr2 157962230 157962277 -92725577 + (CA)n Simple_repeat Simple_repeat 2 48 0 780 191 92 155 chr2 157962589 157963008 -92724846 - HAL1 LINE L1 -632 1875 1490 1727 160 41 3 chr2 157963008 157963301 -92724553 - AluJb SINE Alu -8 304 1 780 191 92 155 chr2 157963301 157963372 -92724482 - HAL1 LINE L1 -1017 1490 1416 434 215 62 62 chr2 157963386 157963530 -92724324 - HAL1 LINE L1 -1253 1254 1111 2352 118 52 16 chr2 157963561 157963943 -92723911 - L1MB3 LINE L1 -2 6181 5786 1414 152 52 0 chr2 157963943 157964193 -92723661 - MER2 DNA MER2_type 0 345 83 714 189 5 120 chr2 157964195 157964295 -92723559 - FRAM SINE Alu -136 40 99 2089 98 7 43 chr2 157964295 157964600 -92723254 + AluSx SINE Alu 1 294 -18 714 189 5 120 chr2 157964600 157964690 -92723164 - FRAM SINE Alu -76 100 1 528 174 0 31 chr2 157964698 157964796 -92723058 - MER2 DNA MER2_type -250 95 1 500 181 21 0 chr2 157964796 157964890 -92722964 - L1MB3 LINE L1 -400 5783 5688 1721 268 95 67 chr2 157964896 157965885 -92721969 - HAL1 LINE L1 -1410 1097 81 1607 177 6 54 chr2 157966306 157966623 -92721231 + AluJb SINE Alu 1 302 -10 390 234 234 19 chr2 157968068 157968222 -92719632 + MIR SINE MIR 11 197 -65 555 248 0 0 chr2 157969841 157969950 -92717904 + MER58A DNA MER1_type 28 136 0 567 187 6 26 chr2 157970048 157970185 -92717669 + MER58B DNA MER1_type 87 340 -1 826 310 41 23 chr2 157970210 157970555 -92717299 + L2 LINE L2 201 551 -2763 845 169 0 0 chr2 157970565 157970689 -92717165 - FLAM_C SINE Alu -19 124 1 1922 328 55 32 chr2 157970692 157971796 -92716058 + L2 LINE L2 542 1671 -1643 343 263 116 69 chr2 157971921 157972153 -92715701 + L2 LINE L2 3013 3255 -58 216 97 0 0 chr2 157972189 157972220 -92715634 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 423 0 0 0 chr2 157972223 157972270 -92715584 + (TG)n Simple_repeat Simple_repeat 2 48 0 183 279 47 0 chr2 157972275 157972318 -92715536 + L2 LINE L2 3149 3193 -79 213 300 0 0 chr2 157972569 157972639 -92715215 + (TA)n Simple_repeat Simple_repeat 1 70 0 250 219 7 124 chr2 157973425 157973562 -92714292 - MLT1L LTR MaLR -305 310 190 276 263 0 26 chr2 157974459 157974535 -92713319 + GA-rich Low_complexity Low_complexity 2 75 0 21 0 0 0 chr2 157975385 157975406 -92712448 + AT_rich Low_complexity Low_complexity 1 21 0 184 275 111 64 chr2 157975491 157975571 -92712283 + MIR SINE MIR 74 149 -113 2437 80 0 6 chr2 157975571 157975882 -92711972 + AluSq SINE Alu 1 309 -4 184 275 111 64 chr2 157975882 157975972 -92711882 + MIR SINE MIR 149 252 -10 656 240 33 0 chr2 157976650 157976771 -92711083 + AluJ SINE Alu 2 126 -186 5820 77 20 57 chr2 157976887 157977786 -92710068 + SVA Other Other 1 866 -520 6150 82 18 60 chr2 157977804 157979395 -92708459 + SVA Other Other 433 1386 0 41387 69 8 4 chr2 157979491 157985625 -92702229 - L1PA5 LINE L1 -1 6153 1 213 258 0 0 chr2 157985735 157985801 -92702053 + GA-rich Low_complexity Low_complexity 3 68 0 263 212 123 103 chr2 157986163 157986187 -92701667 - HAL1 LINE L1 -6 2501 2479 2046 187 19 8 chr2 157986187 157986546 -92701308 + MLT1A1 LTR MaLR 1 363 -2 263 212 123 103 chr2 157986546 157986667 -92701187 - HAL1 LINE L1 -28 2479 2353 1001 178 0 6 chr2 157986678 157986841 -92701013 + AluJ SINE Alu 134 295 -17 334 200 39 117 chr2 157986958 157987163 -92700691 - HAL1 LINE L1 -335 2172 1984 5849 136 22 8 chr2 157987181 157988259 -92699595 - L1PA16 LINE L1 -9 6157 5069 976 276 148 65 chr2 157988396 157989452 -92698402 - HAL1 LINE L1 -585 1922 780 1959 200 67 48 chr2 157989600 157990096 -92697758 - MLT1D LTR MaLR 0 505 1 338 275 53 63 chr2 157990390 157990674 -92697180 - HAL1 LINE L1 -2087 420 52 2344 95 0 25 chr2 157990885 157991201 -92696653 + AluSc SINE Alu 1 308 -1 288 292 165 22 chr2 157991328 157991643 -92696211 - HAL1b LINE L1 -657 691 332 24 53 0 0 chr2 157993547 157993585 -92694269 + AT_rich Low_complexity Low_complexity 1 38 0 638 285 149 13 chr2 157993745 157993973 -92693881 - MIR SINE MIR -3 259 1 332 274 0 0 chr2 157995172 157995245 -92692609 + MIR3 SINE MIR 98 170 -38 753 117 133 0 chr2 157995492 157995612 -92692242 + AluJb SINE Alu 2 137 -175 714 139 9 0 chr2 157996343 157996458 -92691396 + L1MB8 LINE L1 6060 6175 -3 230 298 122 61 chr2 157996463 157996594 -92691260 - MER5A DNA MER1_type -15 174 36 233 336 112 12 chr2 157996880 157997061 -92690793 - MIR3 SINE MIR -23 185 11 321 266 164 57 chr2 157997408 157997671 -92690183 + L2 LINE L2 575 865 -2449 2191 129 0 0 chr2 157998017 157998312 -92689542 - AluSx SINE Alu -17 295 1 2133 142 0 0 chr2 157998792 157999087 -92688767 + AluSx SINE Alu 1 295 -17 506 110 70 0 chr2 157999170 157999270 -92688584 - Charlie5 DNA MER1_type -68 2544 2438 2422 111 3 23 chr2 157999271 157999624 -92688230 + L1MB3 LINE L1 5835 6180 -3 2136 132 0 0 chr2 157999648 157999944 -92687910 + AluSx SINE Alu 1 296 -16 229 135 39 0 chr2 157999944 157999996 -92687858 + (TA)n Simple_repeat Simple_repeat 1 54 0 244 109 18 18 chr2 158000073 158000128 -92687726 + (TA)n Simple_repeat Simple_repeat 1 55 0 29 28 0 0 chr2 158000134 158000170 -92687684 + AT_rich Low_complexity Low_complexity 1 36 0 554 350 52 68 chr2 158000406 158000863 -92686991 + L2 LINE L2 2655 3105 -167 749 205 8 0 chr2 158000863 158000990 -92686864 - FLAM_C SINE Alu -5 128 1 554 350 52 68 chr2 158000990 158001156 -92686698 + L2 LINE L2 3105 3272 0 533 264 40 7 chr2 158001768 158001916 -92685938 - MLT1J LTR MaLR -6 505 353 392 258 17 33 chr2 158001959 158002067 -92685787 + MLT1J LTR MaLR 118 225 -286 1871 151 0 29 chr2 158002067 158002208 -92685646 + AluJb SINE Alu 1 145 -167 2244 98 3 7 chr2 158002208 158002514 -92685340 + AluSx SINE Alu 1 305 -7 1871 151 0 29 chr2 158002514 158002683 -92685171 + AluJb SINE Alu 145 302 -10 392 258 17 33 chr2 158002683 158002694 -92685160 + MLT1J LTR MaLR 225 235 -276 225 182 23 0 chr2 158002729 158002773 -92685081 - MLT1J LTR MaLR -466 45 1 216 355 36 9 chr2 158002816 158002926 -92684928 + MIR SINE MIR 22 134 -128 1283 117 72 168 chr2 158003155 158003530 -92684324 - MER1B DNA MER1_type 0 339 1 335 226 46 73 chr2 158003610 158003662 -92684192 - L1MB8 LINE L1 0 6180 6128 1510 77 26 0 chr2 158003662 158003856 -92683998 - AluSg/x SINE Alu -7 303 105 335 226 46 73 chr2 158003856 158003993 -92683861 - L1MB8 LINE L1 -52 6128 5999 1150 194 5 0 chr2 158004300 158004511 -92683343 - AluJb SINE Alu 0 312 101 369 208 0 14 chr2 158004511 158004583 -92683271 - MSTD LTR MaLR -325 71 1 2063 133 0 29 chr2 158005028 158005343 -92682511 - AluSx SINE Alu -6 306 1 777 182 126 6 chr2 158005676 158005835 -92682019 + MER5B DNA MER1_type 1 178 0 359 119 34 0 chr2 158005880 158005939 -92681915 - MER5B DNA MER1_type 0 178 118 480 131 93 5 chr2 158005940 158006122 -92681732 + L1MA9 LINE L1 5994 6288 -24 273 57 0 0 chr2 158006122 158006157 -92681697 + (TA)n Simple_repeat Simple_repeat 1 35 0 604 178 22 52 chr2 158006157 158006292 -92681562 - MER5B DNA MER1_type -46 132 2 2363 229 25 25 chr2 158006453 158007007 -92680847 - MLT2B3 LTR ERVL 0 554 1 2787 105 20 67 chr2 158007129 158007195 -92680659 - MSTA LTR MaLR 0 428 360 2304 105 0 0 chr2 158007195 158007501 -92680353 - AluSx SINE Alu -6 306 1 2787 105 20 67 chr2 158007501 158007883 -92679971 - MSTA LTR MaLR -68 360 1 22 0 0 0 chr2 158009907 158009929 -92677925 + AT_rich Low_complexity Low_complexity 1 22 0 588 69 0 0 chr2 158010002 158010074 -92677780 + tRNA-Ala-GCG tRNA tRNA 1 72 -3 669 0 0 0 chr2 158010380 158010451 -92677403 - tRNA-Gly-GGC tRNA tRNA -3 71 1 833 175 75 38 chr2 158011847 158011882 -92675972 - AluJo SINE Alu -145 167 135 303 71 0 0 chr2 158011882 158011924 -92675930 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 833 175 75 38 chr2 158011924 158012048 -92675806 - AluJo SINE Alu -177 135 2 688 97 0 0 chr2 158012275 158012368 -92675486 + AluJb SINE Alu 210 302 -10 279 236 18 0 chr2 158012638 158012693 -92675161 + MLT1L LTR MaLR 339 394 -221 281 247 56 11 chr2 158012755 158012844 -92675010 + MLT1L LTR MaLR 515 607 -8 225 0 0 0 chr2 158012846 158012871 -92674983 + (TG)n Simple_repeat Simple_repeat 1 25 0 263 291 76 39 chr2 158013021 158013304 -92674550 + MLT1K LTR MaLR 160 523 -65 1593 168 3 68 chr2 158013319 158013628 -92674226 + AluJo SINE Alu 1 289 -23 1884 127 13 54 chr2 158013793 158014107 -92673747 + AluSx SINE Alu 1 301 -11 221 228 35 18 chr2 158015786 158015843 -92672011 + CT-rich Low_complexity Low_complexity 3 60 0 2064 90 4 4 chr2 158016164 158016431 -92671423 + AluSx SINE Alu 1 267 -45 24 0 0 0 chr2 158016522 158016546 -92671308 + AT_rich Low_complexity Low_complexity 1 24 0 770 289 57 0 chr2 158016864 158017075 -92670779 - L1MC/D LINE L1 -2023 5785 5563 2022 149 3 3 chr2 158017180 158017489 -92670365 - AluJb SINE Alu -3 309 1 222 118 0 0 chr2 158017641 158017675 -92670179 + MER5A DNA MER1_type 40 73 -116 1417 154 90 47 chr2 158017678 158017977 -92669877 + AluJo SINE Alu 1 312 0 1793 173 145 5 chr2 158018095 158018482 -92669372 + MLT1C LTR MaLR 27 467 0 1609 200 3 13 chr2 158018650 158018955 -92668899 + AluJo SINE Alu 2 303 -9 1154 221 173 4 chr2 158019041 158019295 -92668559 + AluSx SINE Alu 1 297 -5 475 267 10 0 chr2 158019380 158019481 -92668373 - U13 snRNA snRNA -2 102 1 554 165 0 0 chr2 158019778 158019857 -92667997 - FLAM SINE Alu -16 127 49 236 306 222 9 chr2 158020361 158020469 -92667385 - MIR SINE MIR -119 143 13 2014 119 0 11 chr2 158020546 158020824 -92667030 - AluSq SINE Alu -12 301 27 2144 116 7 10 chr2 158021388 158021690 -92666164 + AluSx SINE Alu 1 301 -11 893 259 18 14 chr2 158021701 158021921 -92665933 + MIR SINE MIR 38 258 -4 1968 141 0 0 chr2 158022062 158022332 -92665522 + AluJb SINE Alu 12 281 -31 2175 117 0 13 chr2 158022536 158022852 -92665002 + AluSx SINE Alu 1 312 0 2151 111 3 0 chr2 158022859 158023156 -92664698 + AluSp SINE Alu 1 298 -15 1271 250 24 100 chr2 158024238 158024390 -92663464 - L1PB2 LINE L1 -34 6117 5955 2359 85 0 0 chr2 158024390 158024695 -92663159 - AluY SINE Alu -6 305 1 1271 250 24 100 chr2 158024695 158024817 -92663037 - L1PB2 LINE L1 -196 5955 5825 2236 117 3 0 chr2 158024817 158025116 -92662738 + AluSp SINE Alu 1 300 -13 1574 22 0 0 chr2 158025116 158025294 -92662560 + AluYa5 SINE Alu 134 311 0 1271 250 24 100 chr2 158025294 158025410 -92662444 - L1PB2 LINE L1 -325 5826 5776 210 71 0 0 chr2 158025410 158025438 -92662416 + (TA)n Simple_repeat Simple_repeat 1 28 0 1271 250 24 100 chr2 158025438 158025525 -92662329 - L1PB2 LINE L1 -375 5776 5684 1561 190 0 50 chr2 158025592 158025892 -92661962 - AluJb SINE Alu -13 299 15 673 211 43 78 chr2 158025906 158026138 -92661716 - L2 LINE L2 -15 3298 3075 27 0 0 0 chr2 158026205 158026232 -92661622 + AT_rich Low_complexity Low_complexity 1 27 0 188 351 98 69 chr2 158026301 158026475 -92661379 + L2 LINE L2 3092 3270 -2 201 171 0 0 chr2 158026747 158026788 -92661066 - L2 LINE L2 0 3313 3273 970 184 25 0 chr2 158026978 158027141 -92660713 + FRAM SINE Alu 1 165 -11 2218 117 0 0 chr2 158027178 158027478 -92660376 + AluSg SINE Alu 1 300 -10 1185 137 22 0 chr2 158027480 158027663 -92660191 + AluSg/x SINE Alu 124 310 0 802 163 105 14 chr2 158027815 158028078 -92659776 - LTR49 LTR ERV1 -4 591 310 799 204 236 14 chr2 158028072 158028288 -92659566 - LTR29 LTR ERV1 -347 275 12 * 2481 87 3 0 chr2 158028292 158028604 -92659250 - AluSp SINE Alu 0 313 1 2038 127 30 3 chr2 158029417 158029716 -92658138 - AluSc SINE Alu -2 307 1 468 250 179 0 chr2 158030265 158030405 -92657449 - MER5A DNA MER1_type -16 173 9 227 271 14 14 chr2 158030437 158030507 -92657347 + MER5A DNA MER1_type 15 84 -105 1584 183 4 7 chr2 158031089 158031363 -92656491 + AluJo SINE Alu 1 273 -39 332 261 52 96 chr2 158031363 158031441 -92656413 + L1ME LINE L1 5593 5673 -448 445 235 0 10 chr2 158031441 158031543 -92656311 + U13 snRNA snRNA 2 102 -2 332 261 52 96 chr2 158031543 158031694 -92656160 + L1ME LINE L1 5673 5812 -309 2183 107 13 7 chr2 158031694 158032003 -92655851 + AluY SINE Alu 1 311 0 27 49 0 0 chr2 158032098 158032139 -92655715 + AT_rich Low_complexity Low_complexity 1 41 0 221 225 225 0 chr2 158032142 158032213 -92655641 + L2 LINE L2 3227 3313 0 690 286 55 5 chr2 158032231 158032448 -92655406 - MIR SINE MIR -16 246 19 402 60 0 0 chr2 158032506 158032556 -92655298 - MADE1 DNA Mariner 0 80 31 499 250 8 8 chr2 158033973 158034093 -92653761 + MER102b DNA MER1_type 118 237 -104 398 292 87 41 chr2 158034280 158034331 -92653523 - L1MC4 LINE L1 -305 7737 7690 1338 196 96 24 chr2 158034331 158034622 -92653232 - AluJo SINE Alu 0 312 1 398 292 87 41 chr2 158034622 158034936 -92652918 - L1MC4 LINE L1 -352 7690 7355 225 245 0 0 chr2 158034940 158034993 -92652861 + MER102b DNA MER1_type 213 265 -76 2056 133 45 58 chr2 158035118 158035169 -92652685 - THE1C LTR MaLR 0 375 325 2512 50 0 3 chr2 158035169 158035468 -92652386 - AluY SINE Alu -13 298 1 2056 133 45 58 chr2 158035468 158035792 -92652062 - THE1C LTR MaLR -50 325 5 275 289 0 13 chr2 158035792 158035868 -92651986 + L2 LINE L2 3236 3310 -3 1071 320 101 3 chr2 158036137 158036525 -92651329 - LTR16A LTR ERVL 0 450 25 1881 201 78 64 chr2 158036929 158037427 -92650427 - MLT1D LTR MaLR 0 505 1 22 35 0 0 chr2 158038901 158038930 -92648924 + AT_rich Low_complexity Low_complexity 1 29 0 357 274 57 94 chr2 158039492 158039704 -92648150 + MIR SINE MIR 57 260 -2 2347 96 0 3 chr2 158041131 158041433 -92646421 - AluSx SINE Alu -11 301 1 1847 148 41 58 chr2 158041500 158041865 -92645989 - L1PA16 LINE L1 -3 6163 5805 5206 77 48 5 chr2 158042286 158042948 -92644906 + LTR8 LTR ERV1 1 691 0 279 238 62 25 chr2 158043029 158043109 -92644745 - L2 LINE L2 0 3272 3190 2217 120 0 0 chr2 158043347 158043647 -92644207 - AluSg SINE Alu -10 300 1 1623 106 64 7 chr2 158043659 158043941 -92643913 - LTR23 LTR ERV1 -139 298 1 215 260 65 107 chr2 158043959 158043996 -92643858 + MER5B DNA MER1_type 17 54 -124 790 189 107 18 chr2 158043996 158044165 -92643689 - MER5A DNA MER1_type -2 187 4 215 260 65 107 chr2 158044165 158044296 -92643558 + MER5B DNA MER1_type 54 178 0 25 0 0 0 chr2 158045572 158045597 -92642257 + GC_rich Low_complexity Low_complexity 1 25 0 403 318 19 19 chr2 158047199 158047353 -92640501 + L2 LINE L2 3158 3311 -2 226 339 0 0 chr2 158047354 158047419 -92640435 + L2 LINE L2 3247 3311 -2 185 222 0 0 chr2 158047504 158047540 -92640314 + MIR SINE MIR 117 152 -110 1319 139 10 29 chr2 158048541 158048749 -92639105 + AluJb SINE Alu 1 204 -108 294 50 0 0 chr2 158048759 158048799 -92639055 + (A)n Simple_repeat Simple_repeat 1 40 0 2088 112 0 17 chr2 158048808 158049122 -92638732 + AluSx SINE Alu 4 312 0 189 0 0 0 chr2 158049732 158049753 -92638101 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2858 239 71 32 chr2 158050037 158050515 -92637339 + MER21B LTR ERV1 1 522 -341 1734 183 0 22 chr2 158050515 158050827 -92637027 + AluJb SINE Alu 1 305 -7 2858 239 71 32 chr2 158050827 158051127 -92636727 + MER21B LTR ERV1 522 809 -54 1916 130 39 0 chr2 158051785 158052069 -92635785 + AluJb SINE Alu 13 307 -5 21 57 0 0 chr2 158052823 158052858 -92634996 + AT_rich Low_complexity Low_complexity 1 35 0 230 213 163 25 chr2 158053264 158053344 -92634510 + MIR3 SINE MIR 84 174 -34 1981 132 7 0 chr2 158053677 158053965 -92633889 + AluSx SINE Alu 2 291 -21 180 0 0 0 chr2 158053966 158053986 -92633868 + (CA)n Simple_repeat Simple_repeat 2 21 0 839 209 13 0 chr2 158053994 158054147 -92633707 - FRAM SINE Alu -9 167 13 692 320 58 37 chr2 158055026 158055178 -92632676 - MLT1J2 LTR MaLR -118 332 185 2135 111 7 0 chr2 158055178 158055466 -92632388 - AluSx SINE Alu -22 290 1 692 320 58 37 chr2 158055466 158055638 -92632216 - MLT1J2 LTR MaLR -265 185 1 2002 109 69 0 chr2 158055649 158055924 -92631930 - AluSg SINE Alu -16 294 1 1768 180 0 0 chr2 158056409 158056692 -92631162 - AluJo SINE Alu -16 296 14 2143 84 23 23 chr2 158057183 158057482 -92630372 - AluSg1 SINE Alu -10 299 1 575 336 132 16 chr2 158057511 158057843 -92630011 - L2 LINE L2 -68 3204 2812 1619 239 102 26 chr2 158057843 158058312 -92629542 - MLT1D LTR MaLR 0 505 1 575 336 132 16 chr2 158058312 158058417 -92629437 - L2 LINE L2 -460 2812 2721 32 26 0 0 chr2 158058478 158058517 -92629337 + AT_rich Low_complexity Low_complexity 1 39 0 672 170 102 48 chr2 158058520 158058667 -92629187 - MER106B DNA MER1_type -904 155 1 2064 108 14 17 chr2 158058798 158059093 -92628761 + AluSx SINE Alu 1 294 -18 2148 290 141 81 chr2 158059101 158059736 -92628118 - L2 LINE L2 -757 2557 1962 6577 62 34 32 chr2 158059736 158061654 -92626200 - SVA Other Other -520 1383 8 2148 290 141 81 chr2 158061654 158062685 -92625169 - L2 LINE L2 -1352 1962 646 2225 103 0 0 chr2 158062685 158062976 -92624878 + AluSx SINE Alu 21 311 -1 2148 290 141 81 chr2 158062976 158063218 -92624636 - L2 LINE L2 -2668 646 420 798 185 8 0 chr2 158063445 158063575 -92624279 + FLAM_C SINE Alu 1 131 -2 267 254 61 24 chr2 158063689 158063890 -92623964 - L2 LINE L2 -2972 342 70 187 282 51 26 chr2 158064382 158064460 -92623394 + MIR SINE MIR 156 235 -27 196 205 26 0 chr2 158064916 158064955 -92622899 + L2 LINE L2 3273 3312 -1 1925 146 28 0 chr2 158065392 158065679 -92622175 + AluSx SINE Alu 1 295 -17 323 178 313 14 chr2 158066995 158067101 -92620753 - MIR SINE MIR -66 142 3 506 272 58 16 chr2 158067885 158068076 -92619778 - L1ME4a LINE L1 -1 6120 5922 189 0 0 0 chr2 158068077 158068098 -92619756 + (TA)n Simple_repeat Simple_repeat 1 21 0 2283 103 6 16 chr2 158068475 158068787 -92619067 + AluSc SINE Alu 1 309 0 216 250 167 39 chr2 158068788 158068944 -92618910 - MIR3 SINE MIR -31 177 2 726 142 0 0 chr2 158070232 158070338 -92617516 - AluJb SINE Alu -5 307 202 234 328 0 76 chr2 158070338 158070457 -92617397 + L2 LINE L2 2642 2751 -563 1817 154 34 3 chr2 158070457 158070750 -92617104 - AluJo SINE Alu -10 302 1 263 244 256 43 chr2 158070782 158070946 -92616908 + L2 LINE L2 3112 3310 -3 2261 100 0 49 chr2 158071343 158071672 -92616182 - AluSp SINE Alu 0 313 1 847 75 19 0 chr2 158071942 158072049 -92615805 + L1PA5 LINE L1 6042 6150 -4 335 276 126 8 chr2 158072352 158072479 -92615375 + L2 LINE L2 3167 3308 -5 325 346 80 0 chr2 158072593 158072755 -92615099 - MIR3 SINE MIR -1 207 33 2298 102 3 0 chr2 158073918 158074221 -92613633 - AluSq SINE Alu -9 304 1 1607 171 33 23 chr2 158074420 158074719 -92613135 - AluJo SINE Alu 0 312 11 3792 109 47 26 chr2 158077770 158078232 -92609622 - L1MA3 LINE L1 0 6305 5825 2200 96 0 23 chr2 158078232 158078535 -92609319 - AluSx SINE Alu -16 296 1 3792 109 47 26 chr2 158078535 158078684 -92609170 - L1MA3 LINE L1 -480 5825 5681 1138 96 191 0 chr2 158078961 158079149 -92608705 - MER41B LTR ERV1 0 635 412 478 35 0 0 chr2 158079143 158079201 -92608653 - MER41A LTR ERV1 -496 58 1 * 1783 185 3 13 chr2 158079255 158079568 -92608286 - AluJo SINE Alu -2 310 1 218 349 107 35 chr2 158080028 158080197 -92607657 + L2 LINE L2 2268 2448 -866 2229 114 0 13 chr2 158081384 158081692 -92606162 - AluSx SINE Alu -8 304 1 334 314 189 12 chr2 158081932 158082101 -92605753 + MIR SINE MIR 64 262 0 640 156 0 0 chr2 158083111 158083201 -92604653 - FRAM SINE Alu -21 155 66 1063 179 103 83 chr2 158083914 158084204 -92603650 + AluJo SINE Alu 11 306 -6 1187 92 0 0 chr2 158084408 158084560 -92603294 - AluSg/x SINE Alu -21 289 138 340 113 0 0 chr2 158084560 158084611 -92603243 - Alu SINE Alu -256 44 1 1900 161 0 3 chr2 158086219 158086504 -92601350 + AluJb SINE Alu 1 284 -28 412 143 0 0 chr2 158086725 158086795 -92601059 - L1MA5A LINE L1 -3 6294 6225 204 167 0 24 chr2 158087572 158087614 -92600240 + A-rich Low_complexity Low_complexity 2 42 0 1177 92 0 7 chr2 158089846 158089999 -92597855 - AluSq SINE Alu -10 303 152 3850 122 7 33 chr2 158090237 158090720 -92597134 - L1MA5 LINE L1 -1 6299 5834 841 114 38 30 chr2 158090720 158090851 -92597003 - FLAM_C SINE Alu -1 132 1 3850 122 7 33 chr2 158090851 158090973 -92596881 - L1MA5 LINE L1 -466 5834 5710 465 284 104 6 chr2 158090973 158091156 -92596698 + MIR SINE MIR 61 261 -1 201 139 0 0 chr2 158092186 158092229 -92595625 + (A)n Simple_repeat Simple_repeat 1 43 0 244 264 91 50 chr2 158092388 158092509 -92595345 + MIR SINE MIR 121 246 -16 216 0 0 0 chr2 158093059 158093083 -92594771 + (T)n Simple_repeat Simple_repeat 1 24 0 2080 86 0 7 chr2 158093215 158093495 -92594359 - AluSx SINE Alu -21 291 14 1332 135 10 29 chr2 158094514 158094722 -92593132 + AluJb SINE Alu 1 204 -108 324 0 0 0 chr2 158094732 158094768 -92593086 + (A)n Simple_repeat Simple_repeat 1 36 0 1247 212 7 20 chr2 158094775 158095067 -92592787 + AluSq SINE Alu 1 288 -25 330 26 0 0 chr2 158095067 158095106 -92592748 + (TTAA)n Simple_repeat Simple_repeat 2 40 0 1621 116 0 0 chr2 158095289 158095527 -92592327 + AluSg/x SINE Alu 76 312 0 1802 137 71 12 chr2 158095544 158095866 -92591988 - L1MA9 LINE L1 -269 6043 5703 547 307 62 0 chr2 158096223 158096399 -92591455 - MLT1J2 LTR MaLR 0 450 264 189 250 33 33 chr2 158096987 158097047 -92590807 - MIR SINE MIR -92 116 57 1877 141 3 30 chr2 158097680 158097985 -92589869 + AluSq SINE Alu 1 297 -16 198 289 36 60 chr2 158098153 158098236 -92589618 + MIR SINE MIR 3 83 -125 349 331 7 7 chr2 158099755 158099894 -92587960 - MER102b DNA MER1_type 0 341 203 658 173 8 36 chr2 158100345 158100599 -92587255 + CT-rich Low_complexity Low_complexity 1 247 0 25 51 0 0 chr2 158101042 158101081 -92586773 + AT_rich Low_complexity Low_complexity 1 39 0 774 267 52 13 chr2 158101282 158101514 -92586340 + MIR SINE MIR 2 242 -20 285 161 12 99 chr2 158101550 158101631 -92586223 - L1ME1 LINE L1 -7 6159 6086 2416 228 38 50 chr2 158101631 158101897 -92585957 - L1ME1 LINE L1 -31 6135 5867 1051 224 67 0 chr2 158101897 158102107 -92585747 - MER58A DNA MER1_type 0 224 1 2416 228 38 50 chr2 158102107 158102395 -92585459 - L1ME1 LINE L1 -299 5867 5588 2194 102 3 0 chr2 158102395 158102688 -92585166 + AluSg SINE Alu 1 294 -16 2416 228 38 50 chr2 158102688 158102791 -92585063 - L1ME1 LINE L1 -578 5588 5485 2049 125 34 0 chr2 158102802 158103099 -92584755 - AluSx SINE Alu -5 307 1 195 42 0 0 chr2 158103099 158103123 -92584731 + (T)n Simple_repeat Simple_repeat 1 24 0 859 343 90 23 chr2 158103187 158103886 -92583968 - L2 LINE L2 -559 2755 2010 312 27 0 0 chr2 158104577 158104614 -92583240 + (TG)n Simple_repeat Simple_repeat 2 38 0 191 250 76 33 chr2 158105024 158105116 -92582738 - MIR SINE MIR -109 153 58 1581 191 0 17 chr2 158105720 158106014 -92581840 + AluJb SINE Alu 1 289 -23 1857 60 21 0 chr2 158106883 158107116 -92580738 - L1PA10 LINE L1 0 6168 5931 30 27 0 0 chr2 158107388 158107425 -92580429 + AT_rich Low_complexity Low_complexity 1 37 0 484 280 56 60 chr2 158107742 158107992 -92579862 + MIR SINE MIR 14 262 0 237 340 58 10 chr2 158108832 158108935 -92578919 - L2 LINE L2 -13 3259 3152 22 0 0 0 chr2 158110947 158110969 -92576885 + AT_rich Low_complexity Low_complexity 1 22 0 540 317 6 24 chr2 158112001 158112168 -92575686 + MIR SINE MIR 2 165 -97 231 88 0 0 chr2 158112762 158112796 -92575058 + (TG)n Simple_repeat Simple_repeat 1 34 0 327 324 146 9 chr2 158112830 158113043 -92574811 + L1M4 LINE L1 4996 5237 -909 180 0 0 0 chr2 158113080 158113100 -92574754 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1662 189 4 0 chr2 158113102 158113383 -92574471 - AluJo SINE Alu -30 282 1 799 225 109 29 chr2 158115270 158115654 -92572200 + HAL1b LINE L1 1191 1331 -17 21 0 0 0 chr2 158117561 158117582 -92570272 + AT_rich Low_complexity Low_complexity 1 21 0 2087 110 24 3 chr2 158117674 158117965 -92569889 - AluSx SINE Alu -15 297 1 1723 173 16 19 chr2 158117967 158118280 -92569574 - AluJb SINE Alu 0 312 1 457 232 199 49 chr2 158118722 158119153 -92568701 - MLT1F LTR MaLR -27 515 1 2307 94 0 28 chr2 158120420 158120739 -92567115 - AluSx SINE Alu -1 311 2 271 23 45 23 chr2 158120876 158120920 -92566934 + (TTTC)n Simple_repeat Simple_repeat 2 46 0 210 292 44 44 chr2 158122321 158122434 -92565420 + MIR SINE MIR 100 212 -50 421 227 220 33 chr2 158123624 158123774 -92564080 - MER5B DNA MER1_type 0 178 1 1369 176 151 4 chr2 158125788 158126060 -92561794 + AluJb SINE Alu 1 312 0 22 35 0 0 chr2 158126326 158126355 -92561499 + AT_rich Low_complexity Low_complexity 1 29 0 255 37 19 111 chr2 158126958 158127012 -92560842 - L1MB5 LINE L1 -8 6166 6118 1658 185 0 20 chr2 158127108 158127400 -92560454 - AluJo SINE Alu -24 288 3 717 88 193 0 chr2 158127801 158127915 -92559939 - AluJb SINE Alu -176 136 1 22 35 0 0 chr2 158128503 158128532 -92559322 + AT_rich Low_complexity Low_complexity 1 29 0 309 326 0 0 chr2 158129622 158129717 -92558137 + Charlie7 DNA MER1_type 7 101 -2511 283 125 25 75 chr2 158129752 158129832 -92558022 + Charlie7 DNA MER1_type 2485 2560 -52 1168 182 91 59 chr2 158130337 158131014 -92556840 - LTR1B LTR ERV1 0 785 1 1794 152 3 3 chr2 158131179 158131537 -92556317 - AluSx SINE Alu 0 358 1 742 300 38 6 chr2 158131574 158131895 -92555959 + L1ME3A LINE L1 5536 5875 -295 303 182 0 0 chr2 158133195 158133250 -92554604 - L2 LINE L2 0 3313 3259 2483 157 12 2 chr2 158133571 158133999 -92553855 - L1MC1 LINE L1 0 6333 5902 265 201 182 88 chr2 158134052 158134313 -92553541 - L1MC5 LINE L1 -16 7945 7649 450 0 0 0 chr2 158134322 158134372 -92553482 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 834 143 0 15 chr2 158134372 158134495 -92553359 - FLAM_C SINE Alu -179 123 1 265 201 182 88 chr2 158134495 158134541 -92553313 - L1MC5 LINE L1 -312 7649 7609 874 179 11 28 chr2 158134645 158134824 -92553030 - L1PB4 LINE L1 -5 6151 5976 1029 233 126 59 chr2 158134930 158135407 -92552447 - MLT1H1 LTR MaLR -10 545 38 1644 213 54 88 chr2 158135467 158136251 -92551603 - L1MC5 LINE L1 -656 7305 6542 309 306 145 16 chr2 158136321 158136569 -92551285 - L1MC4a LINE L1 -1480 6328 6049 207 0 0 0 chr2 158139071 158139094 -92548760 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 13700 26 6 0 chr2 158139094 158141482 -92546372 - L1PA3 LINE L1 -5 6150 3753 633 226 0 0 chr2 158141504 158141637 -92546217 - FLAM_A SINE Alu -4 138 6 28 0 0 0 chr2 158142615 158142643 -92545211 + AT_rich Low_complexity Low_complexity 1 28 0 1316 219 19 35 chr2 158142647 158142958 -92544896 - AluJo SINE Alu -6 306 1 3907 164 82 7 chr2 158144391 158145159 -92542695 - LTR1B LTR ERV1 0 826 1 191 303 84 17 chr2 158145568 158145687 -92542167 - L2 LINE L2 -212 3060 2934 646 152 5 63 chr2 158145927 158146118 -92541736 + GA-rich Low_complexity Low_complexity 1 180 0 197 32 0 32 chr2 158146213 158146244 -92541610 + (TTTTG)n Simple_repeat Simple_repeat 4 33 0 2426 73 0 3 chr2 158149191 158149491 -92538363 + AluY SINE Alu 1 299 -12 194 297 100 42 chr2 158149862 158150051 -92537803 - MIR SINE MIR -50 212 21 254 320 105 7 chr2 158150872 158151025 -92536829 - LTR67 LTR ERVL -240 317 150 303 330 184 5 chr2 158151687 158151872 -92535982 - MIR SINE MIR 0 262 45 286 238 40 79 chr2 158152063 158152164 -92535690 + L2 LINE L2 3202 3298 -15 201 39 0 0 chr2 158152473 158152499 -92535355 + (T)n Simple_repeat Simple_repeat 1 26 0 349 293 96 52 chr2 158153435 158153684 -92534170 + L2 LINE L2 3045 3304 -9 185 356 92 0 chr2 158153966 158154053 -92533801 - L2 LINE L2 -4 3268 3174 297 312 0 0 chr2 158154094 158154171 -92533683 + L2 LINE L2 3178 3254 -18 541 232 158 65 chr2 158154821 158155144 -92532710 - MLT1H LTR MaLR -184 365 13 190 341 57 16 chr2 158155390 158155513 -92532341 - MIR SINE MIR -113 149 22 224 200 15 0 chr2 158155749 158155814 -92532040 + (CA)n Simple_repeat Simple_repeat 1 66 0 269 297 66 55 chr2 158157717 158157808 -92530046 + L2 LINE L2 3148 3239 -33 193 294 61 136 chr2 158157898 158158112 -92529742 - L2 LINE L2 -184 3088 2891 22 0 0 0 chr2 158160714 158160736 -92527118 + AT_rich Low_complexity Low_complexity 1 22 0 388 263 60 0 chr2 158161908 158162041 -92525813 + L1MC5 LINE L1 7772 7912 -49 704 303 111 3 chr2 158162212 158162555 -92525299 + L1ME4a LINE L1 5669 6048 -73 220 395 12 0 chr2 158163311 158163392 -92524462 + MIR SINE MIR 64 145 -63 2108 102 41 0 chr2 158163547 158163840 -92524014 - AluSx SINE Alu -7 305 1 418 204 11 0 chr2 158163899 158163987 -92523867 + L2 LINE L2 3221 3309 -4 23 68 0 0 chr2 158166045 158166089 -92521765 + AT_rich Low_complexity Low_complexity 1 44 0 26 30 0 0 chr2 158166710 158166743 -92521111 + AT_rich Low_complexity Low_complexity 1 33 0 430 326 131 26 chr2 158168848 158169231 -92518623 + L2 LINE L2 2367 2789 -525 1964 103 0 67 chr2 158169245 158169568 -92518286 - AluSg SINE Alu 0 303 1 595 279 71 50 chr2 158171551 158171693 -92516161 - MIR SINE MIR -15 247 97 2385 85 0 0 chr2 158171693 158171998 -92515856 - AluSg SINE Alu -5 305 1 595 279 71 50 chr2 158171998 158172095 -92515759 - MIR SINE MIR -165 97 3 918 230 0 19 chr2 158174469 158174682 -92513172 - MER3 DNA MER1_type 0 209 1 327 267 102 40 chr2 158174782 158174958 -92512896 - MLT1L LTR MaLR -66 549 363 22 0 0 0 chr2 158175430 158175452 -92512402 + AT_rich Low_complexity Low_complexity 1 22 0 443 328 16 8 chr2 158176593 158176715 -92511139 + MER91A DNA MER1_type 2 124 -72 4932 163 39 17 chr2 158176850 158178085 -92509769 - L1MB3 LINE L1 -2 6181 4918 395 315 31 75 chr2 158178728 158178982 -92508872 + MIR SINE MIR 1 243 -19 842 146 0 29 chr2 158179643 158179780 -92508074 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr2 158181019 158181040 -92506814 + AT_rich Low_complexity Low_complexity 1 21 0 305 159 16 0 chr2 158182392 158182455 -92505399 + (CA)n Simple_repeat Simple_repeat 1 64 0 907 253 45 8 chr2 158182543 158182808 -92505046 + L2 LINE L2 1782 2056 -1258 444 193 56 204 chr2 158182809 158183182 -92504672 + L2 LINE L2 2373 2690 -624 722 235 86 48 chr2 158183185 158183453 -92504401 - L2 LINE L2 -1024 2290 2013 1073 186 11 11 chr2 158183459 158183647 -92504207 - MLT1A1 LTR MaLR 0 365 178 329 287 59 20 chr2 158183819 158183980 -92503874 - MIR SINE MIR -61 147 20 440 233 60 20 chr2 158184421 158184571 -92503283 + L3b LINE CR1 1109 1264 -319 316 236 82 18 chr2 158184933 158185043 -92502811 + MER103 DNA DNA 6 122 -44 1391 351 146 43 chr2 158185705 158186044 -92501810 + L3 LINE CR1 45 348 -1229 2019 154 0 10 chr2 158186044 158186355 -92501499 - AluJo SINE Alu -2 310 3 1391 351 146 43 chr2 158186355 158187402 -92500452 + L3 LINE CR1 348 1573 -4 219 114 0 0 chr2 158187666 158187701 -92500153 + (CA)n Simple_repeat Simple_repeat 2 36 0 1634 177 13 30 chr2 158187851 158188150 -92499704 + AluJb SINE Alu 1 294 -18 519 346 68 19 chr2 158188353 158188662 -92499192 - MLT1I LTR MaLR -18 391 68 1227 239 7 0 chr2 158189096 158189372 -92498482 + L1ME1 LINE L1 5800 6077 -89 2154 110 0 16 chr2 158189966 158190283 -92497571 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 158191497 158191522 -92496332 + AT_rich Low_complexity Low_complexity 1 25 0 281 209 19 19 chr2 158192565 158192670 -92495184 + (TA)n Simple_repeat Simple_repeat 2 106 0 189 147 0 0 chr2 158195509 158195543 -92492311 + (TC)n Simple_repeat Simple_repeat 2 35 0 201 94 0 0 chr2 158197073 158197105 -92490749 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 22 56 0 0 chr2 158197604 158197640 -92490214 + AT_rich Low_complexity Low_complexity 1 36 0 28 48 0 0 chr2 158205526 158205568 -92482286 + AT_rich Low_complexity Low_complexity 1 42 0 740 162 19 0 chr2 158207481 158207508 -92480346 - L1MA7 LINE L1 -207 6084 6059 624 105 97 24 chr2 158207508 158207632 -92480222 - L1MA7 LINE L1 0 6291 6159 740 162 19 0 chr2 158207632 158207763 -92480091 - L1MA7 LINE L1 -232 6059 5920 279 0 0 0 chr2 158209003 158209034 -92478820 + (TG)n Simple_repeat Simple_repeat 1 31 0 273 29 0 0 chr2 158209033 158209067 -92478787 + (GA)n Simple_repeat Simple_repeat 1 34 0 * 262 307 84 14 chr2 158209293 158209440 -92478414 - MIR SINE MIR -62 146 41 675 278 21 5 chr2 158210217 158210411 -92477443 - MIR SINE MIR -9 253 57 897 118 0 0 chr2 158211906 158212033 -92475821 - FLAM_C SINE Alu -12 131 5 246 250 24 24 chr2 158213982 158214085 -92473769 - L1M LINE L1 -760 5386 5299 327 277 109 15 chr2 158214127 158214329 -92473525 - L1 LINE L1 -944 5202 4982 1945 139 0 33 chr2 158214930 158215233 -92472621 - AluJo SINE Alu -19 293 1 303 310 183 7 chr2 158215520 158215804 -92472050 - L1MC/D LINE L1 -1962 5846 5513 410 336 47 40 chr2 158216148 158216401 -92471453 + L2 LINE L2 2319 2573 -741 813 315 120 33 chr2 158216401 158216921 -92470933 + L2 LINE L2 2727 3307 -6 1089 218 65 22 chr2 158217320 158217641 -92470213 - L1ME3 LINE L1 -20 6142 5808 24 0 0 0 chr2 158218353 158218377 -92469477 + AT_rich Low_complexity Low_complexity 1 24 0 247 269 39 10 chr2 158219565 158219669 -92468185 + L1MC4 LINE L1 6961 7067 -975 338 280 15 23 chr2 158219689 158219821 -92468033 + L1MC5 LINE L1 6961 7091 -870 241 139 28 42 chr2 158219931 158220003 -92467851 + L1MC5 LINE L1 7855 7925 -36 2671 20 7 0 chr2 158220637 158220942 -92466912 + AluYa5 SINE Alu 1 307 -4 255 318 16 0 chr2 158221492 158221621 -92466233 + (TA)n Simple_repeat Simple_repeat 1 131 0 702 211 53 90 chr2 158221843 158222109 -92465745 + MIR SINE MIR 7 262 0 1376 134 5 0 chr2 158222635 158222851 -92465003 - AluJb SINE Alu 0 304 88 24 0 0 0 chr2 158222891 158222915 -92464939 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 158224055 158224076 -92463778 + AT_rich Low_complexity Low_complexity 1 21 0 415 193 134 148 chr2 158224313 158224396 -92463458 + Charlie2 DNA MER1_type 1 84 -2778 1990 141 0 0 chr2 158224396 158224693 -92463161 - AluSx SINE Alu -7 305 9 415 193 134 148 chr2 158224693 158224811 -92463043 + Charlie2 DNA MER1_type 84 199 -2663 1257 178 143 71 chr2 158224925 158225374 -92462480 + Charlie2 DNA MER1_type 2241 2743 -119 616 26 0 0 chr2 158225374 158225450 -92462404 - L1PA6 LINE L1 -3 6151 6076 1257 178 143 71 chr2 158225450 158225580 -92462274 + Charlie2 DNA MER1_type 2743 2862 0 303 394 32 4 chr2 158226589 158226840 -92461014 - L2 LINE L2 -617 2697 2440 320 302 34 40 chr2 158227471 158227620 -92460234 + MIR3 SINE MIR 13 160 -48 806 75 0 0 chr2 158227695 158227801 -92460053 - AluY SINE Alu -1 310 205 4426 103 110 139 chr2 158227818 158229273 -92458581 - pTR5 LTR ERV1 0 2438 743 518 235 37 62 chr2 158229381 158229543 -92458311 + MIR SINE MIR 9 166 -96 977 220 106 46 chr2 158229632 158229914 -92457940 + MLT1A1 LTR MaLR 66 364 -1 261 296 118 53 chr2 158230681 158230833 -92457021 - MIR SINE MIR -37 225 64 522 274 89 24 chr2 158230930 158231098 -92456756 - MIR SINE MIR 0 262 84 2103 133 7 0 chr2 158231327 158231620 -92456234 - AluSx SINE Alu -17 295 1 189 321 19 0 chr2 158231630 158231683 -92456171 + MER5A DNA MER1_type 136 189 0 22 0 0 0 chr2 158231886 158231908 -92455946 + AT_rich Low_complexity Low_complexity 1 22 0 1831 192 39 10 chr2 158232210 158232595 -92455259 + MSTD LTR MaLR 1 396 0 737 165 104 18 chr2 158234134 158234298 -92453556 - MER5B DNA MER1_type 0 178 1 408 343 203 0 chr2 158234389 158234559 -92453295 + L3 LINE CR1 178 312 -1265 441 0 0 0 chr2 158234559 158234608 -92453246 + (TG)n Simple_repeat Simple_repeat 2 50 0 408 343 203 0 chr2 158234608 158234688 -92453166 + L3 LINE CR1 312 479 -1098 391 288 100 46 chr2 158235054 158235217 -92452637 + L3 LINE CR1 647 833 -744 1335 226 125 12 chr2 158235217 158235553 -92452301 - MLT1A2 LTR MaLR 0 374 1 391 288 100 46 chr2 158235553 158235670 -92452184 + L3 LINE CR1 833 942 -635 1196 253 28 52 chr2 158236099 158236499 -92451355 + LTR16A LTR ERVL 51 440 -10 269 291 68 10 chr2 158236856 158236959 -92450895 - MIR3 SINE MIR -1 207 99 1703 173 6 26 chr2 158238037 158238350 -92449504 - AluJb SINE Alu -5 307 1 249 314 93 20 chr2 158238351 158238555 -92449299 - L1MC/D LINE L1 -2045 5763 5545 287 246 29 29 chr2 158241213 158241282 -92446572 - MIR3 SINE MIR -27 181 113 2683 188 12 21 chr2 158241481 158242044 -92445810 - MER74A LTR ERVL 0 558 1 289 222 16 0 chr2 158243441 158243504 -92444350 - MER103 DNA DNA -65 101 38 2260 103 7 0 chr2 158244895 158245196 -92442658 - AluSx SINE Alu -5 307 5 360 0 0 0 chr2 158245809 158245849 -92442005 + (TG)n Simple_repeat Simple_repeat 1 40 0 2236 82 3 14 chr2 158245955 158246246 -92441608 - AluSg SINE Alu -3 307 20 284 239 116 109 chr2 158246469 158246607 -92441247 + MIR SINE MIR 16 154 -108 2169 110 0 0 chr2 158246648 158246930 -92440924 + AluSq SINE Alu 17 298 -15 21 71 0 0 chr2 158247414 158247456 -92440398 + AT_rich Low_complexity Low_complexity 1 42 0 336 257 13 26 chr2 158247517 158247669 -92440185 + (TAA)n Simple_repeat Simple_repeat 2 151 0 240 315 0 0 chr2 158249060 158249149 -92438705 + L1MC4 LINE L1 6615 6703 -1339 180 0 0 0 chr2 158249343 158249363 -92438491 + (TA)n Simple_repeat Simple_repeat 1 20 0 309 161 0 0 chr2 158249374 158249430 -92438424 - L1MC4 LINE L1 -1339 6703 6648 923 125 7 0 chr2 158249433 158249569 -92438285 - AluSg/x SINE Alu -6 304 168 1489 307 88 34 chr2 158250042 158250857 -92436997 + L1MA6 LINE L1 42 900 -6309 14498 198 32 28 chr2 158250887 158252200 -92435654 + L1MA6 LINE L1 1735 3042 -4320 2049 132 3 3 chr2 158252200 158252496 -92435358 + AluSg SINE Alu 3 298 -12 14498 198 32 28 chr2 158252496 158255406 -92432448 + L1MA6 LINE L1 3042 5699 -1663 5939 84 1 13 chr2 158255406 158256195 -92431659 + LTR17 LTR ERV1 1 780 0 14498 198 32 28 chr2 158256195 158257866 -92429988 + L1MA6 LINE L1 5699 7362 0 1403 182 97 3 chr2 158258930 158259238 -92428616 + MER44D DNA MER2_type 1 607 -2 504 142 18 26 chr2 158259435 158259548 -92428306 + CT-rich Low_complexity Low_complexity 4 115 0 1566 183 25 15 chr2 158259572 158259846 -92428008 - AluJb SINE Alu -35 277 1 360 0 0 0 chr2 158261129 158261169 -92426685 + (CA)n Simple_repeat Simple_repeat 2 41 0 333 354 35 20 chr2 158261187 158261385 -92426469 + Charlie8 DNA MER1_type 74 274 -2143 1462 176 49 52 chr2 158261403 158261455 -92426399 - MLT1A2 LTR MaLR -6 368 317 2281 122 0 0 chr2 158261455 158261767 -92426087 + AluSx SINE Alu 1 312 0 1462 176 49 52 chr2 158261767 158262083 -92425771 - MLT1A2 LTR MaLR -57 317 1 185 234 0 78 chr2 158262197 158262261 -92425593 - MIR3 SINE MIR -42 166 108 516 16 0 0 chr2 158263034 158263095 -92424759 + (TCTCC)n Simple_repeat Simple_repeat 1 61 0 24 0 0 0 chr2 158265406 158265430 -92422424 + AT_rich Low_complexity Low_complexity 1 24 0 508 240 47 23 chr2 158265644 158265773 -92422081 + MER5B DNA MER1_type 47 178 0 2111 127 0 0 chr2 158266660 158266982 -92420872 + AluSx SINE Alu 1 322 0 2241 97 3 10 chr2 158267303 158267634 -92420220 + AluSq SINE Alu 1 313 0 277 359 38 28 chr2 158267882 158267988 -92419866 + L2 LINE L2 3158 3264 -8 837 168 0 0 chr2 158269276 158269419 -92418435 - FLAM_C SINE Alu 0 143 1 1811 238 77 81 chr2 158269571 158270198 -92417656 - MLT1E2 LTR MaLR 0 626 1 777 218 0 0 chr2 158270252 158270385 -92417469 - FLAM_A SINE Alu 0 133 1 978 289 84 45 chr2 158270478 158271038 -92416816 + L2 LINE L2 2730 3310 -3 1942 142 56 12 chr2 158271558 158271881 -92415973 + MER1B DNA MER1_type 1 337 0 2398 59 3 3 chr2 158272506 158272812 -92415042 - AluY SINE Alu -5 306 1 227 351 34 87 chr2 158273065 158273421 -92414433 + L2 LINE L2 2927 3263 -9 305 345 75 23 chr2 158273898 158274072 -92413782 - MER5A DNA MER1_type -1 188 6 429 324 119 14 chr2 158275353 158275724 -92412130 - L1ME3A LINE L1 -284 5886 5477 322 278 112 12 chr2 158275795 158275964 -92411890 - L1ME3A LINE L1 -770 5376 5191 4583 160 25 28 chr2 158275972 158276846 -92411008 - L1MC2 LINE L1 -23 6321 5450 2297 217 12 29 chr2 158276846 158277357 -92410497 + MER74A LTR ERVL 1 502 -56 5719 210 37 68 chr2 158277362 158278005 -92409849 - L1MC2 LINE L1 -743 5403 4741 2259 113 0 3 chr2 158278005 158278315 -92409539 - AluSx SINE Alu -3 309 1 5719 210 37 68 chr2 158278315 158278698 -92409156 - L1MC2 LINE L1 -1405 4741 4347 1749 189 0 3 chr2 158278698 158278989 -92408865 - AluJo SINE Alu -22 290 1 5719 210 37 68 chr2 158278989 158280094 -92407760 - L1MC2 LINE L1 -1799 4347 3398 757 188 0 15 chr2 158280095 158280228 -92407626 + AluJo SINE Alu 1 131 -181 275 246 0 0 chr2 158280229 158280298 -92407556 - L1MC2 LINE L1 -2740 3406 3338 256 106 21 0 chr2 158280299 158280346 -92407508 - L1MB4 LINE L1 -6 6174 6127 1878 160 4 0 chr2 158280359 158280640 -92407214 - AluJo SINE Alu -30 282 1 2597 156 19 6 chr2 158280650 158281130 -92406724 - L1MB3 LINE L1 -2 6181 5696 1259 239 51 36 chr2 158281139 158281587 -92406267 - L1 LINE L1 -1348 4798 4344 263 311 102 64 chr2 158281654 158281889 -92405965 + ERVL LTR ERVL 3713 3956 -1808 260 400 75 0 chr2 158282520 158282640 -92405214 + L2 LINE L2 3125 3253 -19 1014 252 118 22 chr2 158283915 158284272 -92403582 + MLT1J2 LTR MaLR 1 391 -59 965 207 0 0 chr2 158285571 158285735 -92402119 + AluJo SINE Alu 137 300 -2 232 280 75 43 chr2 158285736 158285829 -92402025 - L2 LINE L2 -15 3257 3162 323 241 78 84 chr2 158285981 158286147 -92401707 + MIR SINE MIR 31 195 -67 188 370 0 0 chr2 158286340 158286413 -92401441 - MIR SINE MIR -123 139 67 652 133 273 6 chr2 158287624 158287789 -92400065 + MER3 DNA MER1_type 1 209 0 218 105 26 0 chr2 158288751 158288789 -92399065 + (CA)n Simple_repeat Simple_repeat 2 40 0 5043 185 26 19 chr2 158289422 158289490 -92398364 - L1MB2 LINE L1 -3 6168 6102 2442 37 40 7 chr2 158289490 158289786 -92398068 + AluY SINE Alu 1 306 -5 5043 185 26 19 chr2 158289786 158291519 -92396335 - L1MB2 LINE L1 -69 6102 4351 1577 197 27 3 chr2 158291531 158291830 -92396024 - AluJo SINE Alu -6 306 1 28 29 0 0 chr2 158292166 158292201 -92395653 + AT_rich Low_complexity Low_complexity 1 35 0 1944 204 11 53 chr2 158292356 158292792 -92395062 + MER47B DNA MER2_type 1 418 0 503 352 62 40 chr2 158292824 158293436 -92394418 - L2 LINE L2 -76 3237 2622 1935 139 30 24 chr2 158294816 158295153 -92392701 + MER2 DNA MER2_type 1 339 -6 2268 121 0 0 chr2 158296558 158296871 -92390983 - AluSq SINE Alu 0 313 1 466 164 60 75 chr2 158297010 158297144 -92390710 - MER69A DNA AcHobo -35 142 11 669 305 75 13 chr2 158297766 158298005 -92389849 - MIR SINE MIR -6 256 3 862 210 27 0 chr2 158298036 158298222 -92389632 - MLT1B LTR MaLR -8 382 192 262 385 7 7 chr2 158299685 158299820 -92388034 + G-rich Low_complexity Low_complexity 4 138 0 1810 96 11 18 chr2 158300255 158300537 -92387317 + HERVH LTR ERV1 7434 7713 0 2733 80 95 7 chr2 158300537 158300949 -92386905 + LTR7 LTR ERV1 1 448 -2 671 150 7 57 chr2 158301358 158301498 -92386356 - FLAM_C SINE Alu -10 133 1 270 0 0 0 chr2 158301920 158301950 -92385904 + (TAA)n Simple_repeat Simple_repeat 2 31 0 483 138 161 0 chr2 158302297 158302384 -92385470 + L1PA14 LINE L1 678 778 -6803 6303 82 18 23 chr2 158302385 158302888 -92384966 - L1PA10 LINE L1 -2 6166 5662 2129 117 0 0 chr2 158302888 158303170 -92384684 - AluSx SINE Alu -30 282 1 6303 82 18 23 chr2 158303170 158303701 -92384153 - L1PA10 LINE L1 -506 5662 5166 2281 115 3 0 chr2 158303701 158304006 -92383848 - AluSx SINE Alu -6 306 1 6303 82 18 23 chr2 158304006 158304504 -92383350 - L1PA10 LINE L1 -1002 5166 4667 9155 138 18 2 chr2 158304504 158306017 -92381837 + L1P LINE L1 3088 4624 -1522 6497 139 34 3 chr2 158306016 158306997 -92380857 + L1PA14 LINE L1 1033 2043 -5538 * 2346 74 0 7 chr2 158306997 158307295 -92380559 + AluY SINE Alu 1 296 -15 4713 130 17 15 chr2 158307296 158308159 -92379695 + L1PA14 LINE L1 2364 3279 -4305 5753 115 25 7 chr2 158308160 158309433 -92378421 + L1PA14 LINE L1 5665 6943 -656 180 77 0 0 chr2 158309433 158309459 -92378395 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 5753 115 25 7 chr2 158309459 158310127 -92377727 + L1PA14 LINE L1 6943 7597 -2 647 58 0 11 chr2 158310502 158310589 -92377265 + AluY SINE Alu 214 299 -12 828 307 82 31 chr2 158311163 158311590 -92376264 - LTR16A LTR ERVL -2 455 1 2318 138 41 8 chr2 158314335 158314725 -92373129 - MER57A LTR ERV1 0 403 1 988 232 31 31 chr2 158316065 158316319 -92371535 - LTR52 LTR ERVL -153 268 15 21 0 0 0 chr2 158320665 158320686 -92367168 + AT_rich Low_complexity Low_complexity 1 21 0 272 274 14 0 chr2 158321659 158321732 -92366122 + L3 LINE CR1 649 722 -855 874 203 16 5 chr2 158322846 158323033 -92364821 - MER5A DNA MER1_type 0 189 1 207 336 84 44 chr2 158323557 158323783 -92364071 + L3b LINE CR1 1348 1582 -1 365 272 0 0 chr2 158324010 158324091 -92363763 - MIR3 SINE MIR -45 163 83 1919 72 0 0 chr2 158324211 158324448 -92363406 + AluY SINE Alu 69 305 -6 1666 190 53 18 chr2 158327195 158327537 -92360317 - MLT1A1 LTR MaLR -2 363 10 192 200 46 62 chr2 158327600 158327665 -92360189 - L3b LINE CR1 -232 1351 1288 194 296 28 28 chr2 158328483 158328554 -92359300 + MIR3 SINE MIR 87 157 -51 256 369 92 23 chr2 158328849 158328979 -92358875 + L2 LINE L2 3134 3272 0 181 321 79 14 chr2 158330690 158330830 -92357024 - L2 LINE L2 -289 2983 2835 243 303 45 11 chr2 158331702 158331791 -92356063 - MIR3 SINE MIR -32 176 85 200 118 29 0 chr2 158332022 158332056 -92355798 + T-rich Low_complexity Low_complexity 2 36 0 1968 115 59 0 chr2 158332114 158332402 -92355452 + AluSg SINE Alu 1 305 -5 3476 47 5 0 chr2 158332405 158332834 -92355020 + L1PA5 LINE L1 5723 6153 -1 1316 148 19 0 chr2 158333426 158333642 -92354212 - HERVH LTR ERV1 -1894 5819 5600 4288 139 1 9 chr2 158333643 158334310 -92353544 - HERVH LTR ERV1 -2564 5149 4488 3416 89 8 14 chr2 158334312 158334817 -92353037 - HERVH LTR ERV1 -3720 3993 3492 828 152 41 0 chr2 158334807 158334952 -92352902 - HERVH LTR ERV1 -4423 3290 3140 * 19974 91 13 30 chr2 158334946 158337984 -92349870 - HERVH LTR ERV1 -4726 2987 1 2763 70 95 7 chr2 158337986 158338398 -92349456 - LTR7 LTR ERV1 -2 448 1 204 231 0 0 chr2 158338550 158338602 -92349252 + (CA)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr2 158338977 158338998 -92348856 + AT_rich Low_complexity Low_complexity 1 21 0 188 281 109 0 chr2 158340071 158340135 -92347719 - L2 LINE L2 -50 3263 3193 618 245 10 68 chr2 158340442 158340634 -92347220 - MER63A DNA MER1_type -27 183 3 531 300 79 12 chr2 158341054 158341294 -92346560 + MIR SINE MIR 3 258 -4 236 98 0 24 chr2 158342925 158342966 -92344888 + (TTCC)n Simple_repeat Simple_repeat 2 41 0 395 323 59 86 chr2 158342967 158342983 -92344871 - L2 LINE L2 -1 3271 3256 2224 115 3 0 chr2 158342983 158343287 -92344567 - AluSp SINE Alu -8 305 1 395 323 59 86 chr2 158343287 158343974 -92343880 - L2 LINE L2 -16 3256 2585 7487 146 7 9 chr2 158344696 158345880 -92341974 + ERVL-B3 LTR ERVL 4569 5749 -15 2729 174 100 6 chr2 158345888 158346354 -92341500 + MLT2B3 LTR ERVL 1 518 -36 216 0 0 0 chr2 158346354 158346378 -92341476 + (TCTA)n Simple_repeat Simple_repeat 2 25 0 2729 174 100 6 chr2 158346378 158346410 -92341444 + MLT2B3 LTR ERVL 518 546 -8 233 309 33 22 chr2 158346431 158346584 -92341270 + MIR SINE MIR 5 198 -64 317 320 0 10 chr2 158346590 158346690 -92341164 - L2 LINE L2 0 3313 3215 209 205 0 0 chr2 158346750 158346789 -92341065 + MIR SINE MIR 220 258 -4 362 251 160 18 chr2 158350261 158350480 -92337374 + MER112 DNA MER1_type 4 253 -3 263 260 41 0 chr2 158350483 158350556 -92337298 - MIR3 SINE MIR -49 159 84 411 38 0 0 chr2 158351235 158351288 -92336566 + (TG)n Simple_repeat Simple_repeat 2 54 0 700 200 77 47 chr2 158352860 158353030 -92334824 + MER20 DNA MER1_type 24 198 -21 226 263 84 21 chr2 158353225 158353320 -92334534 + L1M3 LINE L1 5619 5719 -449 207 281 112 11 chr2 158353372 158353461 -92334393 - L2 LINE L2 -996 2318 2221 199 336 53 69 chr2 158355719 158355850 -92332004 - L2 LINE L2 -5 3267 3139 2247 106 16 0 chr2 158355873 158356176 -92331678 + AluSc SINE Alu 1 308 -1 24 32 0 0 chr2 158356371 158356402 -92331452 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 158356495 158356516 -92331338 + AT_rich Low_complexity Low_complexity 1 21 0 1765 147 0 7 chr2 158356901 158357180 -92330674 - AluSq SINE Alu -4 309 33 782 277 27 50 chr2 158358283 158358523 -92329331 - MIR SINE MIR -3 259 24 2067 142 9 20 chr2 158358523 158358867 -92328987 - MER58B DNA MER1_type -1 340 1 782 277 27 50 chr2 158358867 158358886 -92328968 - MIR SINE MIR -238 24 6 603 148 65 0 chr2 158359763 158359871 -92327983 + MER58 DNA MER1_type 2306 2420 0 248 340 10 10 chr2 158360069 158360166 -92327688 + MARNA DNA Mariner 85 181 -405 186 174 22 43 chr2 158360203 158360249 -92327605 - MIR3 SINE MIR -7 201 157 22 0 0 0 chr2 158360840 158360862 -92326992 + AT_rich Low_complexity Low_complexity 1 22 0 312 120 0 0 chr2 158362764 158362811 -92325043 + (TG)n Simple_repeat Simple_repeat 1 97 0 312 120 0 0 chr2 158362811 158362861 -92324993 + (TG)n Simple_repeat Simple_repeat 2 51 0 1815 146 19 0 chr2 158362885 158363153 -92324701 - AluSx SINE Alu -32 280 8 2413 128 15 46 chr2 158364935 158365394 -92322460 + MER65A LTR ERV1 1 445 0 1413 88 5 5 chr2 158365684 158365877 -92321977 + MER107 DNA MER1_type 5 197 0 1109 302 70 14 chr2 158366656 158367070 -92320784 + L2 LINE L2 2425 2861 -453 199 283 22 0 chr2 158367122 158367168 -92320686 - L2 LINE L2 -16 3297 3251 * 327 308 19 19 chr2 158367160 158367264 -92320590 - MIR SINE MIR -156 106 3 21 36 0 0 chr2 158367521 158367549 -92320305 + AT_rich Low_complexity Low_complexity 1 28 0 2451 167 24 7 chr2 158368362 158368781 -92319073 - MSTB LTR MaLR 0 426 1 630 298 18 46 chr2 158368833 158369051 -92318803 - MIR SINE MIR -39 223 12 849 142 0 0 chr2 158369252 158369379 -92318475 - FLAM_C SINE Alu -6 127 1 1404 140 140 11 chr2 158369930 158370194 -92317660 + AluJb SINE Alu 3 300 -2 264 30 0 0 chr2 158370973 158371006 -92316848 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 23 0 0 0 chr2 158371155 158371178 -92316676 + AT_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr2 158371803 158371840 -92316014 + AT_rich Low_complexity Low_complexity 1 37 0 5835 114 7 11 chr2 158371980 158373485 -92314369 + L1PA14 LINE L1 4629 6144 -17 2260 77 7 0 chr2 158373996 158374306 -92313548 + L1PBa LINE L1 1459 1770 -5093 1245 106 53 57 chr2 158374326 158374553 -92313301 + THE1B LTR MaLR 139 364 0 6011 120 41 13 chr2 158374553 158375826 -92312028 + L1PB1 LINE L1 4796 6107 -44 1131 259 292 15 chr2 158375983 158376582 -92311272 + LTR50 LTR ERVL 8 772 -23 256 301 87 10 chr2 158377978 158378081 -92309773 - MIR SINE MIR -70 138 28 615 369 63 58 chr2 158378930 158379565 -92308289 - L3 LINE CR1 -178 1399 762 451 221 56 56 chr2 158380102 158380351 -92307503 + L1ME LINE L1 903 1151 -5054 452 328 41 25 chr2 158380576 158380969 -92306885 + L1ME LINE L1 1605 2003 -4393 296 293 60 14 chr2 158381059 158381274 -92306580 + L1ME LINE L1 1996 2220 -4176 2067 290 31 20 chr2 158381278 158382223 -92305631 + L1ME LINE L1 2201 3155 -3060 360 154 60 60 chr2 158382256 158382373 -92305481 + L1M4 LINE L1 55 171 -6371 3758 235 95 62 chr2 158382423 158383522 -92304332 + L1M4 LINE L1 965 2143 -4503 255 31 0 0 chr2 158383522 158383554 -92304300 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3758 235 95 62 chr2 158383554 158384179 -92303675 + L1M4 LINE L1 2143 2746 -3900 7865 37 1 0 chr2 158384210 158385944 -92301910 - L1PA3 LINE L1 0 6155 4421 1848 128 4 0 chr2 158386044 158386310 -92301544 + AluSp SINE Alu 47 313 0 5513 198 9 1 chr2 158386310 158387604 -92300250 + L1P5 LINE L1 4157 5463 -688 1326 140 85 13 chr2 158387704 158387940 -92299914 + MSTA LTR MaLR 176 428 0 1937 157 10 0 chr2 158388106 158388412 -92299442 + AluSx SINE Alu 1 309 -3 24 0 0 0 chr2 158388449 158388473 -92299381 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 158390882 158390902 -92296952 + (TA)n Simple_repeat Simple_repeat 2 21 0 31 26 0 0 chr2 158394265 158394303 -92293551 + AT_rich Low_complexity Low_complexity 1 38 0 24 32 0 0 chr2 158394619 158394650 -92293204 + AT_rich Low_complexity Low_complexity 1 31 0 626 323 102 0 chr2 158394650 158394885 -92292969 - MIR SINE MIR -1 261 3 26 0 0 0 chr2 158395323 158395349 -92292505 + AT_rich Low_complexity Low_complexity 1 26 0 26 30 0 0 chr2 158395766 158395799 -92292055 + AT_rich Low_complexity Low_complexity 1 33 0 2052 142 0 0 chr2 158396400 158396702 -92291152 + AluSx SINE Alu 1 302 -10 218 234 117 26 chr2 158396702 158396779 -92291075 - MIR SINE MIR -15 247 164 2126 127 0 3 chr2 158397026 158397333 -92290521 - AluSc SINE Alu -3 306 1 198 0 0 0 chr2 158398188 158398210 -92289644 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 259 347 60 56 chr2 158398542 158398827 -92289027 - L2 LINE L2 -338 2976 2691 26 64 0 0 chr2 158398847 158398894 -92288960 + AT_rich Low_complexity Low_complexity 1 47 0 543 341 48 39 chr2 158399214 158399677 -92288177 + MLT1K LTR MaLR 105 571 -17 279 247 124 0 chr2 158400560 158400657 -92287197 - MER5A DNA MER1_type -77 112 4 220 273 45 45 chr2 158400737 158400825 -92287029 - MIR3 SINE MIR -12 196 109 203 306 14 42 chr2 158401295 158401367 -92286487 + L2 LINE L2 3242 3311 -2 1808 306 139 25 chr2 158402185 158403423 -92284431 + L2 LINE L2 1925 3313 0 265 261 0 22 chr2 158403704 158403796 -92284058 + CT-rich Low_complexity Low_complexity 2 91 0 25 31 0 0 chr2 158404751 158404783 -92283071 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr2 158405752 158405774 -92282080 + AT_rich Low_complexity Low_complexity 1 22 0 2364 86 7 0 chr2 158406113 158406416 -92281438 - AluSp SINE Alu -7 306 2 294 353 61 39 chr2 158406507 158406819 -92281035 + L2 LINE L2 2331 2649 -665 239 346 145 41 chr2 158406948 158407341 -92280513 + L2 LINE L2 2826 3259 -13 199 308 58 87 chr2 158408054 158408158 -92279696 - L2 LINE L2 -14 3258 3158 25 31 0 0 chr2 158408174 158408206 -92279648 + AT_rich Low_complexity Low_complexity 1 32 0 1368 131 14 9 chr2 158410658 158410880 -92276974 - L1PB1 LINE L1 0 6151 5929 2152 131 0 0 chr2 158410980 158411285 -92276569 + AluSx SINE Alu 1 305 -7 21 57 0 0 chr2 158412287 158412322 -92275532 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr2 158412902 158412937 -92274917 + AT_rich Low_complexity Low_complexity 1 35 0 3224 208 53 17 chr2 158414117 158414987 -92272867 - L1M4 LINE L1 -3009 3137 2237 31588 35 188 1 chr2 158414990 158419906 -92267948 + L1PA3 LINE L1 3 5867 -288 588 133 11 0 chr2 158420006 158420096 -92267758 + MSTB1 LTR MaLR 342 432 0 1339 311 70 38 chr2 158420110 158420938 -92266916 - L2 LINE L2 -5 3308 2467 277 279 71 97 chr2 158421062 158421216 -92266638 - L2 LINE L2 -1 3312 3163 196 343 48 48 chr2 158421773 158421919 -92265935 + L2 LINE L2 2173 2318 -996 442 322 71 46 chr2 158422121 158422472 -92265382 - MLT1I LTR MaLR -4 405 46 429 244 76 17 chr2 158422868 158422987 -92264867 + L2 LINE L2 3142 3267 -5 22 0 0 0 chr2 158423561 158423583 -92264271 + AT_rich Low_complexity Low_complexity 1 22 0 188 337 96 0 chr2 158423708 158423791 -92264063 + MIR3 SINE MIR 115 205 -3 22 35 0 0 chr2 158423925 158423954 -92263900 + AT_rich Low_complexity Low_complexity 1 29 0 691 313 19 5 chr2 158423959 158424167 -92263687 - MIR SINE MIR -34 228 18 23 0 0 0 chr2 158424766 158424789 -92263065 + AT_rich Low_complexity Low_complexity 1 23 0 641 277 35 76 chr2 158424922 158425344 -92262510 - MLT1I LTR MaLR -4 405 1 830 317 100 52 chr2 158426022 158427002 -92260852 + L1ME LINE L1 37 1063 -5333 249 273 14 43 chr2 158427076 158427215 -92260639 + T-rich Low_complexity Low_complexity 6 140 0 2342 265 36 40 chr2 158427556 158428741 -92259113 + L1ME LINE L1 4372 5556 -677 1723 225 40 1 chr2 158428740 158429187 -92258667 + L1M4 LINE L1 4880 5339 -807 * 279 273 137 25 chr2 158429159 158429869 -92257985 + L1ME3 LINE L1 4460 5272 -874 * 765 291 61 34 chr2 158429876 158430288 -92257566 + L1ME3 LINE L1 5529 5951 -211 2543 163 30 32 chr2 158430632 158431159 -92256695 - LTR27 LTR ERV1 -108 528 3 965 256 33 4 chr2 158431432 158431705 -92256149 + L3b LINE CR1 1114 1394 -189 2521 57 0 0 chr2 158432815 158433115 -92254739 - AluY SINE Alu -9 302 3 376 201 35 28 chr2 158433918 158434062 -92253792 + (TATAA)n Simple_repeat Simple_repeat 2 146 0 26 50 0 0 chr2 158434067 158434107 -92253747 + AT_rich Low_complexity Low_complexity 1 40 0 504 274 132 9 chr2 158434744 158434956 -92252898 - MIR SINE MIR -5 257 20 1496 194 18 4 chr2 158435408 158435712 -92252142 + AluJo SINE Alu 1 308 0 211 290 0 0 chr2 158436523 158436592 -92251262 + T-rich Low_complexity Low_complexity 1 69 0 676 232 77 46 chr2 158437406 158437600 -92250254 + MER58C DNA MER1_type 16 215 0 233 250 0 0 chr2 158437808 158437872 -92249982 - L1MC4 LINE L1 -1339 6703 6640 356 310 87 65 chr2 158438203 158438526 -92249328 - MLT1I LTR MaLR -38 371 42 24 77 0 0 chr2 158439438 158439490 -92248364 + AT_rich Low_complexity Low_complexity 1 52 0 267 295 57 48 chr2 158439565 158439670 -92248184 + L1MA4A LINE L1 1117 1232 -5977 14852 177 36 18 chr2 158439765 158445772 -92242082 + L1MA4A LINE L1 1239 7356 -9 1911 237 79 9 chr2 158445784 158446426 -92241428 - L1M4 LINE L1 -1052 5163 4477 269 189 31 94 chr2 158446429 158446588 -92241266 - L1MEc LINE L1 -2828 3387 3239 2483 237 46 55 chr2 158447191 158448413 -92239441 - L1MEc LINE L1 -3022 3193 2020 656 250 136 16 chr2 158448413 158448597 -92239257 - MER58C DNA MER1_type 0 215 10 1039 259 76 50 chr2 158448644 158449223 -92238631 - L1MEc LINE L1 -4394 2002 1409 1069 271 48 38 chr2 158449241 158449969 -92237885 - L1MEc LINE L1 -5042 1354 498 1200 172 187 11 chr2 158450095 158450363 -92237491 + MSTA LTR MaLR 114 428 0 370 263 35 0 chr2 158450499 158450613 -92237241 - L1MEc LINE L1 -6171 225 108 961 103 242 6 chr2 158450670 158450835 -92237019 + MER30 DNA MER1_type 1 204 -26 368 204 204 80 chr2 158451380 158451606 -92236248 - MER112 DNA MER1_type -6 254 1 1075 182 0 45 chr2 158451646 158451866 -92235988 + AluJb SINE Alu 82 291 -21 21 0 0 0 chr2 158452295 158452316 -92235538 + AT_rich Low_complexity Low_complexity 1 21 0 1690 124 13 126 chr2 158453848 158454228 -92233626 + MER44D DNA MER2_type 1 607 -2 23 54 0 0 chr2 158454319 158454356 -92233498 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 158454656 158454677 -92233177 + AT_rich Low_complexity Low_complexity 1 21 0 24 77 0 0 chr2 158455292 158455344 -92232510 + AT_rich Low_complexity Low_complexity 1 52 0 420 165 0 134 chr2 158455904 158456001 -92231853 + Tigger7 DNA MER2_type 2402 2485 -2 3662 110 4 0 chr2 158456916 158457443 -92230411 + L1PA15 LINE L1 5636 6164 -1 294 73 0 0 chr2 158457700 158457741 -92230113 + (TG)n Simple_repeat Simple_repeat 2 42 0 198 0 0 0 chr2 158458872 158458894 -92228960 + (A)n Simple_repeat Simple_repeat 1 22 0 14753 123 21 24 chr2 158459853 158460339 -92227515 + Tigger1 DNA MER2_type 1 487 -1931 1528 184 7 43 chr2 158460339 158460638 -92227216 + AluJo SINE Alu 1 288 -24 14753 123 21 24 chr2 158460638 158460684 -92227170 + Tigger1 DNA MER2_type 487 532 -1886 2131 114 0 0 chr2 158460684 158460973 -92226881 + AluSx SINE Alu 14 302 -10 14753 123 21 24 chr2 158460973 158461320 -92226534 + Tigger1 DNA MER2_type 532 879 -1539 1823 150 27 3 chr2 158461320 158461613 -92226241 + AluSx SINE Alu 1 300 -12 14753 123 21 24 chr2 158461613 158463156 -92224698 + Tigger1 DNA MER2_type 879 2418 0 425 303 102 68 chr2 158463163 158463252 -92224602 - L1M4 LINE L1 -1999 4147 4063 2193 132 0 0 chr2 158463252 158463563 -92224291 - AluSx SINE Alu -1 311 1 425 303 102 68 chr2 158463563 158463972 -92223882 - L1M4 LINE L1 -2083 4063 3632 181 243 68 68 chr2 158464043 158464117 -92223737 - MIR3 SINE MIR -38 170 97 2981 113 4 0 chr2 158465730 158466180 -92221674 + L1PA14 LINE L1 5706 6157 -4 1666 147 7 41 chr2 158468562 158468855 -92218999 - THE1B LTR MaLR -10 354 72 2773 66 0 3 chr2 158468868 158469230 -92218624 - THE1B-int LTR MaLR -1219 361 1 2136 118 36 25 chr2 158469231 158469588 -92218266 - THE1B LTR MaLR -1 363 3 2078 110 7 0 chr2 158469699 158469999 -92217855 + AluSx SINE Alu 1 302 -10 23 0 0 0 chr2 158470555 158470578 -92217276 + AT_rich Low_complexity Low_complexity 1 23 0 2172 115 0 3 chr2 158470748 158471043 -92216811 - AluSx SINE Alu -18 294 1 21 0 0 0 chr2 158471277 158471298 -92216556 + AT_rich Low_complexity Low_complexity 1 21 0 1821 31 9 0 chr2 158471299 158471522 -92216332 - L1PA5 LINE L1 -9 6145 5921 331 70 0 0 chr2 158471523 158471566 -92216288 + L1P1 LINE L1 5667 5709 -446 273 62 70 0 chr2 158471533 158471583 -92216271 + L1P5 LINE L1 5677 5729 -422 * 197 268 0 9 chr2 158471853 158471965 -92215889 + (TA)n Simple_repeat Simple_repeat 2 112 0 274 239 43 11 chr2 158471997 158472089 -92215765 + L1MC4 LINE L1 6609 6703 -1339 258 215 31 0 chr2 158472061 158472126 -92215728 - L1MC4 LINE L1 -1339 6703 6637 * 194 234 0 13 chr2 158472151 158472228 -92215626 + (TA)n Simple_repeat Simple_repeat 2 77 0 508 174 11 0 chr2 158472669 158472761 -92215093 + MER5A DNA MER1_type 14 106 -83 710 194 0 38 chr2 158473375 158473535 -92214319 + FRAM SINE Alu 1 154 -12 26 107 0 0 chr2 158474353 158474456 -92213398 + AT_rich Low_complexity Low_complexity 1 103 0 23 54 0 0 chr2 158474575 158474612 -92213242 + AT_rich Low_complexity Low_complexity 1 37 0 1218 247 67 110 chr2 158474717 158475499 -92212355 + MER20B DNA MER1_type 36 783 0 387 268 39 16 chr2 158475633 158475760 -92212094 + MIR3 SINE MIR 48 177 -31 235 288 34 42 chr2 158476124 158476242 -92211612 - L1MC4 LINE L1 -1340 6702 6586 31 0 0 0 chr2 158477546 158477577 -92210277 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 158478210 158478231 -92209623 + AT_rich Low_complexity Low_complexity 1 21 0 754 308 24 0 chr2 158479855 158480066 -92207788 + MIR SINE MIR 37 252 -10 319 390 81 5 chr2 158480464 158480687 -92207167 - MIR SINE MIR -18 244 5 1383 151 62 75 chr2 158480819 158481111 -92206743 - AluJo SINE Alu -24 288 1 752 295 70 8 chr2 158481364 158481751 -92206103 + L1MEc LINE L1 1211 1621 -4775 369 282 57 70 chr2 158481816 158482043 -92205811 + L1MEc LINE L1 1856 2079 -4317 292 155 121 0 chr2 158482979 158483037 -92204817 - MER5A DNA MER1_type -83 106 42 24 0 0 0 chr2 158484247 158484271 -92203583 + AT_rich Low_complexity Low_complexity 1 24 0 185 362 0 0 chr2 158484678 158484725 -92203129 - L2 LINE L2 -88 3225 3179 3320 47 0 0 chr2 158485217 158485622 -92202232 + L1PA7 LINE L1 5737 6141 -13 479 250 113 63 chr2 158486165 158486449 -92201405 + L1MEd LINE L1 811 1108 -5011 255 242 0 0 chr2 158486473 158486535 -92201319 + L1MEd LINE L1 1172 1233 -4886 413 296 31 66 chr2 158486844 158487070 -92200784 - L2 LINE L2 -1 3312 3095 207 0 0 0 chr2 158487149 158487172 -92200682 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 198 217 0 36 chr2 158488705 158488788 -92199066 + CT-rich Low_complexity Low_complexity 2 81 0 779 179 113 0 chr2 158488905 158489056 -92198798 + FRAM SINE Alu 9 176 0 358 250 60 0 chr2 158489259 158489359 -92198495 - MER112 DNA MER1_type -6 254 149 403 318 47 0 chr2 158489596 158489703 -92198151 + L2 LINE L2 3202 3313 0 381 302 22 7 chr2 158489840 158489979 -92197875 - MLT1J1 LTR MaLR -295 151 11 702 184 43 0 chr2 158490891 158491032 -92196822 + FRAM SINE Alu 9 155 -21 491 316 91 0 chr2 158491167 158491354 -92196500 - MIR SINE MIR -54 208 5 1991 94 4 18 chr2 158491722 158491998 -92195856 + AluSq SINE Alu 25 296 -17 298 291 159 77 chr2 158492454 158492932 -92194922 - LTR33 LTR ERVL -2 519 3 435 209 229 0 chr2 158493010 158493115 -92194739 - FLAM_C SINE Alu -1 132 4 2281 190 19 0 chr2 158493296 158493728 -92194126 + L1MA9 LINE L1 5496 5935 -377 729 215 31 43 chr2 158493741 158493904 -92193950 + AluJo SINE Alu 121 281 -31 699 214 66 90 chr2 158493931 158494263 -92193591 + L1MA9 LINE L1 5959 6282 -30 1619 91 0 5 chr2 158494279 158494499 -92193355 - L1PA7 LINE L1 -4 6150 5932 1028 103 0 0 chr2 158494580 158494736 -92193118 - L1MA8 LINE L1 -1 6290 6135 247 389 41 9 chr2 158495020 158495241 -92192613 - L2 LINE L2 -218 3054 2827 2676 159 56 20 chr2 158495245 158495742 -92192112 - MLT2B2 LTR ERVL 0 515 1 330 164 48 34 chr2 158495785 158495931 -92191923 + (TA)n Simple_repeat Simple_repeat 2 149 0 328 251 102 60 chr2 158495943 158496110 -92191744 + MER5B DNA MER1_type 1 174 -4 387 340 106 49 chr2 158496141 158496630 -92191224 + L2 LINE L2 2242 2758 -556 402 331 127 42 chr2 158496736 158497044 -92190810 + L2 LINE L2 2939 3272 0 251 323 43 115 chr2 158497018 158497480 -92190374 - L2 LINE L2 -23 3249 2821 * 1655 195 96 30 chr2 158497940 158498376 -92189478 + MLT1C LTR MaLR 3 467 0 437 267 9 0 chr2 158498397 158498502 -92189352 - MIR SINE MIR -10 252 147 26 30 0 0 chr2 158498503 158498536 -92189318 + AT_rich Low_complexity Low_complexity 1 33 0 237 316 32 27 chr2 158499649 158499780 -92188074 - MIR SINE MIR -79 129 17 198 103 0 0 chr2 158500407 158500436 -92187418 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 183 80 0 0 chr2 158500924 158500949 -92186905 + (CATA)n Simple_repeat Simple_repeat 3 27 0 252 186 0 0 chr2 158502511 158502570 -92185284 + (TG)n Simple_repeat Simple_repeat 1 59 0 195 129 0 0 chr2 158503006 158503037 -92184817 + (CA)n Simple_repeat Simple_repeat 2 32 0 198 209 0 0 chr2 158504003 158504046 -92183808 + (CATATA)n Simple_repeat Simple_repeat 5 47 0 324 316 113 34 chr2 158506427 158506604 -92181250 - MIR SINE MIR -52 210 20 235 71 48 0 chr2 158507933 158507975 -92179879 + (TA)n Simple_repeat Simple_repeat 1 44 0 387 105 0 0 chr2 158509374 158509431 -92178423 + (TG)n Simple_repeat Simple_repeat 2 58 0 228 81 0 0 chr2 158509572 158509609 -92178245 + L1PA15 LINE L1 6129 6165 0 377 360 37 11 chr2 158509631 158509820 -92178034 - MIR SINE MIR -59 203 10 3546 55 2 0 chr2 158510766 158511218 -92176636 + L1PA7 LINE L1 5700 6152 -2 311 325 79 16 chr2 158511526 158511652 -92176202 + HAL1 LINE L1 1815 1948 -559 586 174 76 0 chr2 158511700 158511832 -92176022 - L1MB1 LINE L1 -1 6167 6026 1665 150 87 14 chr2 158512011 158512298 -92175556 - AluJo SINE Alu 0 312 5 303 203 0 14 chr2 158512352 158512426 -92175428 + HAL1 LINE L1 2075 2147 -360 378 191 0 0 chr2 158512880 158512948 -92174906 + MLT1E2 LTR MaLR 559 626 0 634 263 6 22 chr2 158513099 158513278 -92174576 + MER5B DNA MER1_type 3 178 0 374 262 97 79 chr2 158514813 158515103 -92172751 - L1ME4a LINE L1 -3 6118 5824 747 312 148 38 chr2 158515133 158515585 -92172269 - L2 LINE L2 0 3313 2812 275 376 37 0 chr2 158516267 158516376 -92171478 - L2 LINE L2 -5 3308 3196 348 585 6 17 chr2 158516940 158517116 -92170738 + (TAAA)n Simple_repeat Simple_repeat 4 177 0 267 347 60 15 chr2 158517602 158517801 -92170053 - L2 LINE L2 -215 3057 2850 21 0 0 0 chr2 158518170 158518191 -92169663 + AT_rich Low_complexity Low_complexity 1 21 0 319 356 95 5 chr2 158518573 158518795 -92169059 + MIR SINE MIR 20 261 -1 22 35 0 0 chr2 158518950 158518979 -92168875 + AT_rich Low_complexity Low_complexity 1 29 0 651 252 73 23 chr2 158519689 158519991 -92167863 - L1MC5 LINE L1 -36 7925 7609 322 296 0 0 chr2 158520002 158520090 -92167764 + (TA)n Simple_repeat Simple_repeat 2 89 0 311 233 67 67 chr2 158520162 158520312 -92167542 - L1MC5 LINE L1 -614 7347 7198 1015 216 44 0 chr2 158520316 158520520 -92167334 + MER58A DNA MER1_type 12 224 0 1212 241 75 63 chr2 158520618 158521338 -92166516 - L1MC5 LINE L1 -803 7005 6403 549 301 33 6 chr2 158523616 158523799 -92164055 + MIR SINE MIR 73 260 -2 416 200 0 0 chr2 158524242 158524322 -92163532 + MER116 DNA Mariner 1 80 0 28 102 0 0 chr2 158524681 158524779 -92163075 + AT_rich Low_complexity Low_complexity 1 98 0 34 24 0 0 chr2 158524987 158525028 -92162826 + AT_rich Low_complexity Low_complexity 1 41 0 2014 227 71 46 chr2 158525028 158525707 -92162147 - L1MB8 LINE L1 -7 6171 5476 2694 208 55 2 chr2 158525715 158526420 -92161434 - L1MB8 LINE L1 -747 5399 4671 1023 228 23 105 chr2 158526421 158526499 -92161355 - MLT2C1 LTR ERVL -2 395 312 2075 122 3 19 chr2 158526499 158526810 -92161044 + AluSx SINE Alu 1 306 -6 1023 228 23 105 chr2 158526810 158527161 -92160693 - MLT2C1 LTR ERVL -85 312 1 741 191 0 0 chr2 158527182 158527313 -92160541 - AluJb SINE Alu -25 287 157 433 149 0 0 chr2 158527321 158527395 -92160459 - AluS SINE Alu -235 74 1 216 0 0 0 chr2 158527469 158527493 -92160361 + (A)n Simple_repeat Simple_repeat 1 24 0 410 269 145 0 chr2 158527515 158527701 -92160153 - L1MB8 LINE L1 -1543 4603 4391 344 211 40 0 chr2 158527701 158527777 -92160077 + Tigger5 DNA MER2_type 1 79 -2244 459 208 0 0 chr2 158527847 158527924 -92159930 + Tigger5 DNA MER2_type 2247 2323 0 21 104 0 0 chr2 158527931 158528008 -92159846 + AT_rich Low_complexity Low_complexity 1 77 0 1341 231 49 52 chr2 158528016 158528588 -92159266 - L1MB8 LINE L1 -2134 4012 3443 25 0 0 0 chr2 158528610 158528635 -92159219 + AT_rich Low_complexity Low_complexity 1 25 0 2720 244 68 43 chr2 158528635 158529963 -92157891 - L1ME1 LINE L1 -11 6224 4144 1466 289 88 67 chr2 158529959 158531478 -92156376 - L1ME1 LINE L1 -4755 1641 92 * 408 40 0 0 chr2 158531654 158531704 -92156150 + (TTCC)n Simple_repeat Simple_repeat 3 52 0 2116 104 10 3 chr2 158531717 158532005 -92155849 - AluSq SINE Alu -23 290 1 23 54 0 0 chr2 158532248 158532285 -92155569 + AT_rich Low_complexity Low_complexity 1 37 0 2173 239 81 33 chr2 158532720 158533267 -92154587 - L1ME1 LINE L1 -5 6161 5567 1812 157 3 46 chr2 158533267 158533591 -92154263 + AluJb SINE Alu 2 311 -1 2173 239 81 33 chr2 158533591 158533792 -92154062 - L1ME1 LINE L1 -599 5567 5377 585 117 75 0 chr2 158534905 158534993 -92152861 - MER6A DNA MER2_type 0 605 511 1856 104 21 18 chr2 158534993 158535273 -92152581 + THE1B LTR MaLR 1 281 -83 2124 130 0 0 chr2 158535307 158535607 -92152247 + AluSc SINE Alu 10 309 0 807 107 0 0 chr2 158535607 158535728 -92152126 + THE1B-int LTR MaLR 36 156 -1424 * 8666 104 35 113 chr2 158535725 158535999 -92151855 + THE1B-int LTR MaLR 97 391 -1189 1017 167 0 0 chr2 158535999 158536155 -92151699 - AluSg/x SINE Alu -21 291 136 8666 104 35 113 chr2 158536155 158537334 -92150520 + THE1B-int LTR MaLR 391 1580 0 2220 118 40 9 chr2 158537336 158537685 -92150169 + THE1B LTR MaLR 3 362 -2 813 89 24 0 chr2 158537687 158537811 -92150043 - MER6A DNA MER2_type -85 520 394 2573 141 16 14 chr2 158537811 158538238 -92149616 - MSTA LTR MaLR 0 428 1 8525 176 63 5 chr2 158538243 158539524 -92148330 - MSTA-int LTR MaLR -16 1635 246 2115 129 33 33 chr2 158539524 158539888 -92147966 + THE1B LTR MaLR 1 364 0 8525 176 63 5 chr2 158539888 158540150 -92147704 - MSTA-int LTR MaLR -1405 246 1 2144 163 64 7 chr2 158540151 158540556 -92147298 - MSTA LTR MaLR 0 428 1 2443 167 15 8 chr2 158540556 158540951 -92146903 - MER6A DNA MER2_type -207 398 1 241 259 0 17 chr2 158541559 158541617 -92146237 + MIR3 SINE MIR 150 206 -2 378 230 10 0 chr2 158543357 158543457 -92144397 - L1MB8 LINE L1 -6 6172 6072 231 91 0 0 chr2 158544176 158544209 -92143645 + L1M LINE L1 5395 5427 -875 645 50 0 0 chr2 158544626 158544706 -92143148 - MADE1 DNA Mariner 0 80 1 26 50 0 0 chr2 158545227 158545267 -92142587 + AT_rich Low_complexity Low_complexity 1 40 0 537 108 0 72 chr2 158545559 158545753 -92142101 + (TA)n Simple_repeat Simple_repeat 1 180 0 1208 250 53 65 chr2 158545934 158546461 -92141393 + MER21B LTR ERV1 19 589 -274 3679 116 16 0 chr2 158546461 158547006 -92140848 + MER41A LTR ERV1 1 554 0 1208 250 53 65 chr2 158547006 158547173 -92140681 + MER21B LTR ERV1 589 756 -107 528 273 149 3 chr2 158547603 158547711 -92140143 + L1MCc LINE L1 1237 1328 -5146 246 32 0 0 chr2 158547711 158547742 -92140112 + (GA)n Simple_repeat Simple_repeat 1 31 0 528 273 149 3 chr2 158547742 158547944 -92139910 + L1MCc LINE L1 1328 1587 -4887 211 214 0 0 chr2 158548515 158548557 -92139297 + (CATATA)n Simple_repeat Simple_repeat 6 47 0 2419 96 3 0 chr2 158549166 158549478 -92138376 + AluSq SINE Alu 1 313 0 821 126 16 0 chr2 158550066 158550193 -92137661 - Tigger3b DNA MER2_type -304 927 799 * 3352 136 7 28 chr2 158550189 158550735 -92137119 - Tigger3b DNA MER2_type -696 535 1 305 374 24 12 chr2 158551649 158551815 -92136039 + MIR SINE MIR 21 188 -74 376 282 264 6 chr2 158551927 158552101 -92135753 + MER97a DNA MER1_type? 317 535 -359 310 287 98 25 chr2 158552145 158552267 -92135587 - L1ME3A LINE L1 -7 6163 6033 6593 99 23 41 chr2 158552444 158553534 -92134320 + L1MA3 LINE L1 5229 6298 -7 961 184 105 71 chr2 158553700 158554053 -92133801 + MLT1A1 LTR MaLR 1 365 0 12419 26 1 0 chr2 158554704 158556937 -92130917 - L1PA3 LINE L1 -3 6152 3918 4993 45 0 0 chr2 158556938 158557584 -92130270 + L1P LINE L1 3046 3691 -2455 812 304 179 23 chr2 158558062 158558869 -92128985 - L2 LINE L2 -1 3312 2332 419 373 74 20 chr2 158558975 158559273 -92128581 - L1MEd LINE L1 -5283 836 523 872 289 138 56 chr2 158559671 158560238 -92127616 - L2 LINE L2 -1042 2272 1623 2142 118 10 0 chr2 158560238 158560544 -92127310 - AluSq SINE Alu -4 309 1 872 289 138 56 chr2 158560544 158560750 -92127104 - L2 LINE L2 -1691 1623 1435 517 259 102 91 chr2 158560912 158561186 -92126668 + L3 LINE CR1 1243 1519 -58 27 73 0 0 chr2 158563265 158563320 -92124534 + AT_rich Low_complexity Low_complexity 1 55 0 370 258 194 45 chr2 158564451 158564606 -92123248 - MIR SINE MIR -70 192 15 4220 187 35 50 chr2 158565936 158566403 -92121451 - L1 LINE L1 -1121 5025 4552 1792 119 119 32 chr2 158566403 158566748 -92121106 + THE1C LTR MaLR 1 375 0 4220 187 35 50 chr2 158566748 158567316 -92120538 - L1 LINE L1 -1594 4552 4006 * 4447 183 42 4 chr2 158567313 158568414 -92119440 + L1MB1 LINE L1 5028 6168 0 28 29 0 0 chr2 158568466 158568501 -92119353 + AT_rich Low_complexity Low_complexity 1 35 0 949 169 38 58 chr2 158568616 158568877 -92118977 + Charlie5 DNA MER1_type 2369 2624 0 33 43 0 0 chr2 158568997 158569044 -92118810 + AT_rich Low_complexity Low_complexity 1 47 0 1874 122 14 14 chr2 158569045 158569333 -92118521 - AluSx SINE Alu -24 288 1 279 306 105 10 chr2 158570071 158570274 -92117580 - L2 LINE L2 0 3313 2754 237 241 139 22 chr2 158570671 158570808 -92117046 + L1ME LINE L1 5709 5861 -260 23 54 0 0 chr2 158570984 158571021 -92116833 + AT_rich Low_complexity Low_complexity 1 37 0 450 173 222 6 chr2 158571025 158571187 -92116667 - MER113 DNA MER1_type? -280 241 45 25 31 0 0 chr2 158571433 158571465 -92116389 + AT_rich Low_complexity Low_complexity 1 32 0 2092 124 0 0 chr2 158571558 158571875 -92115979 + AluSx SINE Alu 1 317 0 532 101 13 0 chr2 158572249 158572328 -92115526 - MADE1 DNA Mariner 0 80 1 245 343 58 36 chr2 158573690 158573827 -92114027 + L2 LINE L2 3133 3272 0 266 294 38 52 chr2 158573921 158574060 -92113794 + MER5A DNA MER1_type 7 161 -28 595 253 98 0 chr2 158574418 158574592 -92113262 - MSTD LTR MaLR -43 353 163 1834 247 62 96 chr2 158574739 158575892 -92111962 - L1MEc LINE L1 -3705 2522 1440 809 137 38 0 chr2 158575928 158576059 -92111795 + MSTC LTR MaLR 1 136 -292 1415 229 37 44 chr2 158576172 158576608 -92111246 + MLT1D LTR MaLR 73 505 0 207 0 0 0 chr2 158577339 158577362 -92110492 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1634 126 76 50 chr2 158577845 158578149 -92109705 + AluSx SINE Alu 1 311 0 2482 193 6 28 chr2 158578216 158578687 -92109167 - MLT2B1 LTR ERVL -57 463 3 2310 88 60 28 chr2 158579347 158579700 -92108154 + THE1B LTR MaLR 1 364 0 11581 93 8 6 chr2 158579700 158581278 -92106576 + THE1B-int LTR MaLR 1 1580 0 1895 139 81 29 chr2 158581278 158581624 -92106230 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr2 158581915 158581939 -92105915 + AT_rich Low_complexity Low_complexity 1 24 0 1541 145 3 82 chr2 158582179 158582350 -92105504 + L1PA16 LINE L1 5874 6057 -109 1976 89 79 34 chr2 158582350 158582641 -92105213 + AluSq SINE Alu 1 304 -9 1541 145 3 82 chr2 158582641 158582654 -92105200 + L1PA16 LINE L1 6057 6069 -97 194 0 39 0 chr2 158582654 158582680 -92105174 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1541 145 3 82 chr2 158582680 158582812 -92105042 + L1PA16 LINE L1 6069 6166 0 1795 157 64 20 chr2 158582857 158582900 -92104954 + MER46B DNA MER2_type 2 42 -2689 4196 68 9 0 chr2 158582900 158583445 -92104409 + L1PA7 LINE L1 5605 6154 0 1795 157 64 20 chr2 158583445 158583746 -92104108 + MER46B DNA MER2_type 42 236 0 734 214 140 84 chr2 158583746 158584031 -92103823 + MLT1A1 LTR MaLR 65 365 0 456 217 38 0 chr2 158584031 158584135 -92103719 - MLT1C LTR MaLR -357 110 3 702 210 7 0 chr2 158584274 158584417 -92103437 + AluY SINE Alu 138 281 -30 2293 94 0 3 chr2 158584461 158584760 -92103094 + AluY SINE Alu 1 298 -13 290 115 0 82 chr2 158584760 158584821 -92103033 + L1PB1 LINE L1 6096 6151 0 * 825 272 10 9 chr2 158584811 158585049 -92102805 + L1ME LINE L1 5472 5704 -462 4173 247 63 9 chr2 158585050 158585447 -92102407 - L1MC/D LINE L1 -743 5403 5029 2346 82 0 3 chr2 158585447 158585753 -92102101 - AluY SINE Alu -6 305 1 4173 247 63 9 chr2 158585753 158586888 -92100966 - L1MC/D LINE L1 -1117 5029 3850 2367 220 24 37 chr2 158586900 158587523 -92100331 - L1MA10 LINE L1 -1 6333 5719 1424 236 50 19 chr2 158587519 158587909 -92099945 - L1MEc LINE L1 -3573 2642 2270 * 1329 204 85 4 chr2 158587909 158588208 -92099646 - AluJo SINE Alu 0 320 1 1424 236 50 19 chr2 158588208 158588351 -92099503 - L1MEc LINE L1 -3945 2270 2133 12267 197 42 51 chr2 158588378 158590756 -92097098 - L1PB3 LINE L1 -8 6203 3806 987 214 0 0 chr2 158590756 158590943 -92096911 - AluSg/x SINE Alu -9 301 115 12267 197 42 51 chr2 158590943 158592301 -92095553 - L1PB3 LINE L1 -2405 3806 2438 2036 128 17 0 chr2 158592301 158592598 -92095256 - AluSg SINE Alu -8 302 1 12267 197 42 51 chr2 158592598 158594299 -92093555 - L1PB3 LINE L1 -3773 2438 664 2144 119 0 0 chr2 158594299 158594584 -92093270 - AluSx SINE Alu -27 285 1 12267 197 42 51 chr2 158594584 158594607 -92093247 - L1PB3 LINE L1 -5547 664 642 4514 291 20 22 chr2 158594615 158596155 -92091699 - L1PBa LINE L1 -5320 1543 7 2988 250 39 25 chr2 158596219 158596625 -92091229 - L1M1 LINE L1 -4124 3441 3042 2181 115 3 10 chr2 158596625 158596930 -92090924 + AluSg SINE Alu 5 307 -3 2988 250 39 25 chr2 158596930 158598119 -92089735 - L1M1 LINE L1 -4523 3042 2108 1596 291 102 23 chr2 158599190 158600290 -92087564 + L1MEc LINE L1 56 1400 -4996 36249 65 2 6 chr2 158600296 158605840 -92082014 + L1PA5 LINE L1 630 6152 -2 2775 254 59 17 chr2 158606005 158608105 -92079749 + L1MEc LINE L1 1595 3920 -2295 747 270 22 14 chr2 158608110 158608332 -92079522 + L1M3c LINE L1 6 229 -5912 386 261 42 17 chr2 158608338 158608457 -92079397 + L1M3c LINE L1 323 444 -5697 40 0 0 0 chr2 158608481 158608521 -92079333 + AT_rich Low_complexity Low_complexity 1 40 0 672 229 71 28 chr2 158608541 158608794 -92079060 + L1ME LINE L1 825 1088 -5117 527 291 62 75 chr2 158608836 158609252 -92078602 + L1ME LINE L1 1679 2089 -4307 2117 131 0 7 chr2 158610071 158610377 -92077477 - AluJb SINE Alu -8 304 1 187 250 71 18 chr2 158610621 158610677 -92077177 + MIR SINE MIR 44 102 -160 180 77 0 0 chr2 158613215 158613241 -92074613 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 1837 104 13 30 chr2 158616031 158616330 -92071524 + MER39B LTR ERV1 277 570 -83 22 35 0 0 chr2 158616595 158616624 -92071230 + AT_rich Low_complexity Low_complexity 1 29 0 628 298 96 37 chr2 158616787 158617174 -92070680 - MLT1J2 LTR MaLR -45 401 1 21 57 0 0 chr2 158618416 158618451 -92069403 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 158618490 158618513 -92069341 + AT_rich Low_complexity Low_complexity 1 23 0 1855 151 4 0 chr2 158618540 158618818 -92069036 - AluSp SINE Alu -32 281 3 2616 201 58 53 chr2 158618999 158619526 -92068328 - MER99 DNA DNA -3 825 291 5718 110 6 26 chr2 158619526 158620414 -92067440 - MER4D LTR ERV1 -2 870 1 2616 201 58 53 chr2 158620414 158620608 -92067246 - MER99 DNA DNA -537 291 100 235 364 0 0 chr2 158620797 158620885 -92066969 - MER99 DNA DNA -735 93 6 1930 118 34 3 chr2 158620980 158621277 -92066577 - AluSg1 SINE Alu -3 306 1 463 333 0 0 chr2 158622694 158622811 -92065043 + L2 LINE L2 3197 3313 0 226 305 17 69 chr2 158623099 158623273 -92064581 + MIR SINE MIR 46 210 -52 1052 209 118 65 chr2 158623489 158623564 -92064290 - MLT1A2 LTR MaLR 0 374 304 2134 142 3 0 chr2 158623564 158623874 -92063980 + AluSx SINE Alu 2 312 0 1052 209 118 65 chr2 158623874 158624153 -92063701 - MLT1A2 LTR MaLR -70 304 1 336 48 0 0 chr2 158624269 158624311 -92063543 + (TG)n Simple_repeat Simple_repeat 2 43 0 214 263 0 0 chr2 158624331 158624388 -92063466 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 267 194 30 15 chr2 158626359 158626426 -92061428 + CT-rich Low_complexity Low_complexity 2 69 0 186 43 0 0 chr2 158627331 158627354 -92060500 + (TC)n Simple_repeat Simple_repeat 2 24 0 1311 308 25 31 chr2 158628195 158628705 -92059149 + LTR33 LTR ERVL 15 521 0 1356 248 13 0 chr2 158629038 158629344 -92058510 + L1MB7 LINE L1 5402 5711 -467 * 25169 67 4 3 chr2 158629342 158633466 -92054388 - L1PA6 LINE L1 -6 6148 2018 2457 162 15 25 chr2 158633466 158633936 -92053918 + L1MB7 LINE L1 5701 6165 -19 231 173 0 0 chr2 158633941 158633993 -92053861 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 379 172 25 16 chr2 158634110 158634232 -92053622 + GA-rich Low_complexity Low_complexity 2 124 0 23 0 0 0 chr2 158636336 158636359 -92051495 + AT_rich Low_complexity Low_complexity 1 23 0 203 184 0 20 chr2 158636744 158636793 -92051061 + GA-rich Low_complexity Low_complexity 3 50 0 202 364 9 27 chr2 158637065 158637175 -92050679 + L2 LINE L2 2950 3057 -215 293 226 0 0 chr2 158638491 158638544 -92049310 + MER3 DNA MER1_type 43 95 -114 295 125 0 0 chr2 158638502 158638542 -92049312 - Charlie5 DNA MER1_type -2409 203 164 299 325 77 62 chr2 158639888 158640082 -92047772 - MIR3 SINE MIR -3 205 9 5480 78 15 1 chr2 158640293 158641040 -92046814 - L1P LINE L1 -1510 4636 3880 191 316 143 30 chr2 158641816 158641949 -92045905 + L2 LINE L2 2502 2649 -665 631 116 0 0 chr2 158642430 158642525 -92045329 - AluSg/x SINE Alu -33 279 185 553 239 42 84 chr2 158642544 158642783 -92045071 + MER112 DNA MER1_type 6 234 -26 186 233 283 0 chr2 158642824 158642884 -92044970 + L2 LINE L2 3194 3270 -2 23 33 0 0 chr2 158643258 158643288 -92044566 + AT_rich Low_complexity Low_complexity 1 30 0 256 313 20 10 chr2 158644216 158644315 -92043539 - MER5A DNA MER1_type -51 138 39 344 248 68 3 chr2 158644360 158644495 -92043359 + MER5A DNA MER1_type 7 189 0 708 245 43 59 chr2 158645187 158645446 -92042408 + MIR SINE MIR 9 262 0 24 32 0 0 chr2 158645923 158645954 -92041900 + AT_rich Low_complexity Low_complexity 1 31 0 2107 92 0 4 chr2 158646181 158646453 -92041401 + AluSx SINE Alu 42 312 0 2240 41 0 0 chr2 158647901 158648171 -92039683 - L1PA3 LINE L1 -3 6152 5883 221 289 33 33 chr2 158650534 158650655 -92037199 + MIR3 SINE MIR 85 205 -3 282 160 0 0 chr2 158650660 158650710 -92037144 + (TG)n Simple_repeat Simple_repeat 2 51 0 2316 97 0 0 chr2 158652610 158652908 -92034946 + AluSc SINE Alu 1 298 -11 387 235 123 9 chr2 158652992 158653132 -92034722 - MIR SINE MIR -65 143 3 259 322 118 26 chr2 158653167 158653319 -92034535 - MIR3 SINE MIR -39 169 4 292 321 165 38 chr2 158653800 158654455 -92033399 + L2 LINE L2 1706 2443 -871 22 0 0 0 chr2 158654524 158654546 -92033308 + AT_rich Low_complexity Low_complexity 1 22 0 537 270 70 23 chr2 158656630 158656845 -92031009 - MIR SINE MIR -1 261 37 22 0 0 0 chr2 158658076 158658098 -92029756 + AT_rich Low_complexity Low_complexity 1 22 0 27 73 0 0 chr2 158660392 158660447 -92027407 + AT_rich Low_complexity Low_complexity 1 55 0 386 338 156 50 chr2 158660464 158661364 -92026490 + L2 LINE L2 1815 2809 -505 2385 63 10 0 chr2 158662213 158662515 -92025339 - AluY SINE Alu -6 305 1 1978 120 7 19 chr2 158663374 158663682 -92024172 - AluSx SINE Alu -8 304 1 356 296 108 46 chr2 158666278 158666585 -92021269 - L1ME4a LINE L1 -187 5934 5609 439 316 85 22 chr2 158667647 158667963 -92019891 - MER102b DNA MER1_type -4 337 2 5564 92 19 0 chr2 158668004 158669025 -92018829 + L1PA10 LINE L1 5025 6064 -104 930 212 6 11 chr2 158669034 158669213 -92018641 - MER92B LTR ERV1 -415 221 44 992 235 31 15 chr2 158669213 158669473 -92018381 + MLT2B3 LTR ERVL 1 264 -290 327 275 54 74 chr2 158670023 158670172 -92017682 - L2 LINE L2 -9 3263 3118 219 294 4 0 chr2 158670643 158670709 -92017145 - MIR SINE MIR -106 102 36 483 339 72 15 chr2 158671459 158671654 -92016200 + MIR SINE MIR 5 210 -52 2244 99 10 3 chr2 158671865 158672168 -92015686 - AluSc SINE Alu -4 305 1 219 246 15 62 chr2 158674097 158674162 -92013692 + L2 LINE L2 3247 3308 -5 311 211 40 13 chr2 158674555 158674631 -92013223 + LTR33A LTR ERVL 444 521 -2 1061 247 85 75 chr2 158674935 158675627 -92012227 - L1MEc LINE L1 -1481 4734 4036 220 224 15 0 chr2 158675632 158675699 -92012155 + (TA)n Simple_repeat Simple_repeat 2 69 0 478 182 10 20 chr2 158675710 158675809 -92012045 - AluSg/x SINE Alu -17 293 196 534 205 8 88 chr2 158675889 158676070 -92011784 - L1MEc LINE L1 -2787 3428 3269 1981 126 4 0 chr2 158676070 158676339 -92011515 - AluSg SINE Alu -22 288 19 534 205 8 88 chr2 158676339 158676396 -92011458 - L1MEc LINE L1 -2946 3269 3209 289 301 16 31 chr2 158676364 158676557 -92011297 - L1MEc LINE L1 -4574 1822 1633 * 333 207 43 50 chr2 158676561 158676701 -92011153 - L1MC4 LINE L1 0 8042 7904 316 263 20 20 chr2 158676704 158676803 -92011051 + (TATATG)n Simple_repeat Simple_repeat 5 103 0 1123 309 95 42 chr2 158676854 158678368 -92009486 - L1MEc LINE L1 -4767 1629 36 258 56 0 0 chr2 158678419 158678455 -92009399 + (TC)n Simple_repeat Simple_repeat 1 36 0 24 0 0 0 chr2 158679868 158679892 -92007962 + AT_rich Low_complexity Low_complexity 1 24 0 191 35 0 35 chr2 158680190 158680219 -92007635 + (TA)n Simple_repeat Simple_repeat 1 28 0 244 196 18 0 chr2 158680258 158680314 -92007540 + L1M4 LINE L1 2222 2278 -3868 474 265 81 53 chr2 158680316 158680620 -92007234 + L1M4 LINE L1 2353 2672 -3474 2004 126 28 0 chr2 158680620 158680906 -92006948 - AluSx SINE Alu -15 297 4 474 265 81 53 chr2 158680906 158680997 -92006857 + L1M4 LINE L1 2672 2759 -3387 309 258 62 0 chr2 158681553 158681650 -92006204 + L1M4 LINE L1 2868 2970 -3176 2150 109 3 3 chr2 158681853 158682147 -92005707 + AluSg SINE Alu 6 299 -11 2367 237 93 18 chr2 158682255 158683040 -92004814 - L1PBa LINE L1 -6014 849 6 231 254 0 66 chr2 158683132 158683254 -92004600 + GA-rich Low_complexity Low_complexity 4 117 0 195 42 0 0 chr2 158683271 158683295 -92004559 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 24 0 0 0 chr2 158683554 158683578 -92004276 + AT_rich Low_complexity Low_complexity 1 24 0 404 301 23 53 chr2 158685546 158685679 -92002175 + MIR SINE MIR 23 151 -111 212 333 194 22 chr2 158685878 158686244 -92001610 + L2 LINE L2 2832 3260 -12 216 0 0 0 chr2 158687263 158687287 -92000567 + (A)n Simple_repeat Simple_repeat 1 24 0 436 193 0 0 chr2 158687941 158688024 -91999830 - AluY SINE Alu -228 83 1 2507 50 7 0 chr2 158688043 158688345 -91999509 - AluY SINE Alu -7 304 1 5573 163 32 73 chr2 158688346 158689440 -91998414 - L1PB1 LINE L1 -44 6107 5008 1123 84 36 54 chr2 158689440 158689607 -91998247 - AluSg/x SINE Alu -24 288 125 5573 163 32 73 chr2 158689607 158690575 -91997279 - L1PB1 LINE L1 -1143 5008 4002 266 192 41 14 chr2 158690575 158690648 -91997206 - L1ME1 LINE L1 -2487 5508 5434 * 2053 243 61 14 chr2 158690645 158691270 -91996584 + L1ME1 LINE L1 5494 6147 -19 518 196 135 0 chr2 158691301 158691434 -91996420 + L1ME1 LINE L1 5281 5431 -747 588 207 20 154 chr2 158691437 158691742 -91996112 + L1ME1 LINE L1 5831 6094 -72 460 214 166 0 chr2 158691653 158691798 -91996056 + L1MA10 LINE L1 6164 6332 -2 * 275 284 54 0 chr2 158693114 158693188 -91994666 - MIR SINE MIR -184 78 1 659 265 19 72 chr2 158693195 158693459 -91994395 - MIR SINE MIR 0 262 13 2148 100 3 13 chr2 158693561 158693861 -91993993 - AluY SINE Alu -14 297 1 24 32 0 0 chr2 158693917 158693948 -91993906 + AT_rich Low_complexity Low_complexity 1 31 0 2247 264 22 9 chr2 158694113 158694663 -91993191 + L1P4 LINE L1 6 562 -7019 * 16833 227 44 21 chr2 158694661 158694950 -91992904 + L1P4 LINE L1 969 1250 -6353 3084 175 28 51 chr2 158694950 158695657 -91992197 + LTR8 LTR ERV1 1 691 0 16833 227 44 21 chr2 158695657 158696355 -91991499 + L1P4 LINE L1 1250 1931 -5672 2423 106 56 0 chr2 158696355 158696712 -91991142 + MER51B LTR ERV1 1 377 0 16833 227 44 21 chr2 158696712 158700412 -91987442 + L1P4 LINE L1 1931 5545 -2058 198 0 0 0 chr2 158700412 158700434 -91987420 + (TA)n Simple_repeat Simple_repeat 2 23 0 16833 227 44 21 chr2 158700434 158700991 -91986863 + L1P4 LINE L1 5545 6088 -1515 1615 171 128 50 chr2 158700991 158701388 -91986466 - MSTA LTR MaLR 0 428 1 16833 227 44 21 chr2 158701388 158702069 -91985785 + L1P4 LINE L1 6088 7084 -519 1077 236 58 16 chr2 158702169 158702427 -91985427 + MLT2B3 LTR ERVL 285 553 -1 355 143 0 0 chr2 158702427 158702476 -91985378 - MER92B LTR ERV1 -587 49 1 687 303 96 32 chr2 158703761 158704167 -91983687 + MLT1K LTR MaLR 157 588 0 244 339 90 26 chr2 158704194 158704416 -91983438 + MIR SINE MIR 15 262 0 2264 77 11 0 chr2 158704697 158704984 -91982870 + AluY SINE Alu 1 290 -21 297 75 0 0 chr2 158704984 158705024 -91982830 + (AAGTG)n Simple_repeat Simple_repeat 2 41 0 614 311 147 36 chr2 158705967 158706443 -91981411 + HAL1 LINE L1 1168 1696 -811 22 88 0 0 chr2 158706729 158706786 -91981068 + AT_rich Low_complexity Low_complexity 1 57 0 502 311 94 63 chr2 158706977 158707372 -91980482 + L1M3d LINE L1 4 650 -5481 377 184 23 58 chr2 158707748 158707835 -91980019 + L1M3d LINE L1 917 1000 -5141 9364 228 46 51 chr2 158707854 158708792 -91979062 + L1ME4a LINE L1 975 1916 -4466 2369 59 3 3 chr2 158708792 158709078 -91978776 + AluY SINE Alu 1 286 -25 9364 228 46 51 chr2 158709078 158709604 -91978250 + L1ME4a LINE L1 1916 2443 -3939 1968 142 0 3 chr2 158709604 158709893 -91977961 + AluSx SINE Alu 1 288 -24 195 42 0 0 chr2 158709893 158709917 -91977937 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 9364 228 46 51 chr2 158709917 158712498 -91975356 + L1ME4a LINE L1 2441 5076 -1306 367 283 40 81 chr2 158712699 158712897 -91974957 + HAL1 LINE L1 19 208 -2299 1184 265 89 50 chr2 158713254 158713938 -91973916 + HAL1 LINE L1 719 1429 -1078 697 220 144 43 chr2 158713990 158714336 -91973518 + HAL1 LINE L1 1807 2187 -320 940 220 117 20 chr2 158714479 158714852 -91973002 + LTR50 LTR ERVL 296 791 -4 227 260 39 29 chr2 158714861 158714965 -91972889 + HAL1 LINE L1 2290 2394 -113 207 0 0 0 chr2 158717029 158717052 -91970802 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 731 261 27 63 chr2 158717260 158717649 -91970205 + L1ME4a LINE L1 5778 6161 -196 30 27 0 0 chr2 158717695 158717732 -91970122 + AT_rich Low_complexity Low_complexity 1 37 0 25 75 0 0 chr2 158717777 158717830 -91970024 + AT_rich Low_complexity Low_complexity 1 53 0 44386 35 1 1 chr2 158718379 158724542 -91963312 + L1PA3 LINE L1 9 6155 0 1801 184 76 25 chr2 158725052 158725459 -91962395 + MSTA LTR MaLR 1 428 0 377 248 46 13 chr2 158725740 158725893 -91961961 - L1ME LINE L1 -382 5739 5582 351 0 0 0 chr2 158725939 158725978 -91961876 + (CA)n Simple_repeat Simple_repeat 2 40 0 24 0 0 0 chr2 158726036 158726060 -91961794 + AT_rich Low_complexity Low_complexity 1 24 0 314 323 113 56 chr2 158726335 158726669 -91961185 - L1ME LINE L1 -1967 4179 3816 4841 208 71 85 chr2 158726669 158728449 -91959405 + MER52A LTR ERV1 1 1755 0 314 323 113 56 chr2 158728449 158728523 -91959331 - L1ME LINE L1 -2330 3816 3748 1038 196 76 0 chr2 158728650 158728875 -91958979 - L1PB4 LINE L1 -1 6155 5914 376 333 102 48 chr2 158728876 158729398 -91958456 - L1ME LINE L1 -2509 3637 3088 25 0 0 0 chr2 158729488 158729513 -91958341 + AT_rich Low_complexity Low_complexity 1 25 0 417 330 55 53 chr2 158729579 158729994 -91957860 - L1ME LINE L1 -3129 3017 2602 681 209 16 0 chr2 158730026 158730155 -91957699 + FLAM_A SINE Alu 1 131 -2 367 180 0 0 chr2 158730387 158730448 -91957406 + L1PA16 LINE L1 142 202 -6647 10209 151 13 14 chr2 158730449 158732135 -91955719 + L1PA16 LINE L1 847 2530 -4319 765 111 0 0 chr2 158732135 158732243 -91955611 - L1PA15-16 LINE L1 -4292 2557 2450 1514 93 23 9 chr2 158732297 158732513 -91955341 + L1PA15-16 LINE L1 2316 2534 -4315 634 170 0 0 chr2 158732509 158732615 -91955239 - L1PA15-16 LINE L1 -4291 2558 2453 * 11185 207 27 11 chr2 158732638 158736307 -91951547 + L1PA16 LINE L1 3142 6866 -3 21 0 0 0 chr2 158737799 158737820 -91950034 + AT_rich Low_complexity Low_complexity 1 21 0 210 316 25 38 chr2 158738004 158738083 -91949771 - MER5B DNA MER1_type -100 78 1 186 103 0 0 chr2 158740416 158740445 -91947409 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 666 47 0 0 chr2 158740447 158740533 -91947321 + (CTATG)n Simple_repeat Simple_repeat 2 87 0 1952 134 3 24 chr2 158740533 158740824 -91947030 - AluSx SINE Alu -27 285 1 308 297 59 14 chr2 158742656 158742844 -91945010 + MIR SINE MIR 4 249 -13 239 246 0 0 chr2 158743230 158743287 -91944567 + MIR SINE MIR 65 121 -87 324 0 0 0 chr2 158745125 158745161 -91942693 + (TG)n Simple_repeat Simple_repeat 2 37 0 218 192 19 0 chr2 158745404 158745456 -91942398 + GA-rich Low_complexity Low_complexity 2 54 0 484 317 175 18 chr2 158746810 158747318 -91940536 - L2 LINE L2 -7 3306 2715 1707 279 133 16 chr2 158747322 158748024 -91939830 - L2 LINE L2 -1286 2028 1245 192 309 0 18 chr2 158748028 158748083 -91939771 - L2 LINE L2 -2178 1136 1083 436 222 64 28 chr2 158748129 158748252 -91939602 + MLT1J2 LTR MaLR 324 446 0 772 152 13 0 chr2 158749294 158749445 -91938409 + CT-rich Low_complexity Low_complexity 2 154 0 225 362 133 0 chr2 158750926 158751031 -91936823 - L2 LINE L2 -6 3266 3148 219 36 0 0 chr2 158751128 158751156 -91936698 + (CA)n Simple_repeat Simple_repeat 2 29 0 2218 93 36 0 chr2 158751692 158751994 -91935860 - AluSp SINE Alu 0 313 1 297 278 155 0 chr2 158752055 158752152 -91935702 + MIR SINE MIR 57 168 -94 583 304 89 5 chr2 158753315 158753529 -91934325 + MIR SINE MIR 12 243 -19 396 293 28 71 chr2 158753755 158753967 -91933887 + MIR SINE MIR 18 220 -42 25 0 0 0 chr2 158754294 158754319 -91933535 + AT_rich Low_complexity Low_complexity 1 25 0 14848 211 11 6 chr2 158754516 158758895 -91928959 - L1PB1 LINE L1 -14 6137 1766 225 0 0 0 chr2 158759479 158759504 -91928350 + (A)n Simple_repeat Simple_repeat 1 25 0 352 234 25 21 chr2 158762027 158762309 -91925545 + (TA)n Simple_repeat Simple_repeat 1 283 0 316 151 6 164 chr2 158762339 158762498 -91925356 - L1MA7 LINE L1 -2 6289 6156 197 400 83 8 chr2 158763720 158763840 -91924014 - L2 LINE L2 -36 3236 3108 359 338 86 7 chr2 158763912 158764051 -91923803 + MIR3 SINE MIR 36 185 -23 2039 149 3 0 chr2 158765309 158765617 -91922237 + AluSx SINE Alu 1 309 -3 1658 244 86 59 chr2 158765720 158766403 -91921451 + MER50 LTR ERV1 14 715 -19 607 272 100 35 chr2 158766776 158767066 -91920788 - L2 LINE L2 0 3313 3005 750 272 40 24 chr2 158767589 158768013 -91919841 + L1M4c LINE L1 2269 2706 -3676 21 71 0 0 chr2 158768281 158768323 -91919531 + AT_rich Low_complexity Low_complexity 1 42 0 244 287 75 0 chr2 158768415 158768509 -91919345 - MIR SINE MIR -1 261 161 * 285 348 102 13 chr2 158768503 158768800 -91919054 - L2 LINE L2 -255 3017 2685 440 371 22 22 chr2 158768974 158769152 -91918702 - MIR3 SINE MIR -15 193 16 266 358 42 0 chr2 158769521 158769641 -91918213 + L3 LINE CR1 1447 1571 -6 243 286 100 0 chr2 158771049 158771119 -91916735 - MER2 DNA MER2_type 0 345 269 1114 133 18 89 chr2 158771169 158771394 -91916460 - MER2 DNA MER2_type -135 210 2 521 229 229 7 chr2 158771400 158771553 -91916301 - MIR SINE MIR -69 193 7 24 53 0 0 chr2 158772314 158772352 -91915502 + AT_rich Low_complexity Low_complexity 1 38 0 1254 225 81 75 chr2 158772740 158773234 -91914620 - MLT1D LTR MaLR -8 497 1 7176 202 134 27 chr2 158774736 158776322 -91911532 - MER52A LTR ERV1 0 1755 1 1960 194 44 70 chr2 158777294 158777820 -91910034 + MLT2B3 LTR ERVL 1 512 -42 261 305 11 11 chr2 158777821 158777916 -91909938 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 892 194 6 0 chr2 158777916 158778081 -91909773 + AluJb SINE Alu 133 298 -14 603 348 17 9 chr2 158778562 158778792 -91909062 - MIR SINE MIR -1 261 30 764 296 86 26 chr2 158778913 158779261 -91908593 - MLT1I LTR MaLR -22 387 19 255 291 12 12 chr2 158779433 158779519 -91908335 + MIR SINE MIR 177 262 0 1578 201 3 26 chr2 158779926 158780239 -91907615 - AluJo SINE Alu -6 306 1 670 265 119 15 chr2 158780401 158780669 -91907185 + LTR33A LTR ERVL 226 521 -2 271 360 212 18 chr2 158780669 158781164 -91906690 + L3 LINE CR1 966 1556 -21 1062 0 0 0 chr2 158782066 158782184 -91905670 - AluYa5/8 SINE Alu 0 311 194 306 290 131 0 chr2 158782184 158782291 -91905563 - MLT1H LTR MaLR -37 512 392 294 305 123 7 chr2 158782318 158782472 -91905382 - MLT1H LTR MaLR -251 298 127 639 271 106 26 chr2 158784815 158785117 -91902737 - MER102b DNA MER1_type -9 332 7 302 318 177 5 chr2 158785285 158785483 -91902371 + MIR SINE MIR 28 259 -3 543 277 74 43 chr2 158785561 158785792 -91902062 - MIR SINE MIR -13 249 12 3630 54 6 35 chr2 158786709 158787188 -91900666 + THE1B-int LTR MaLR 1116 1580 0 1995 126 27 48 chr2 158787188 158787560 -91900294 + THE1B LTR MaLR 1 364 0 369 323 50 31 chr2 158788089 158788250 -91899604 - MER5B DNA MER1_type -3 175 12 195 246 18 35 chr2 158788509 158788566 -91899288 - L3 LINE CR1 -880 697 642 1193 205 9 0 chr2 158788569 158788784 -91899070 + AluJo SINE Alu 1 217 -95 281 295 29 72 chr2 158788796 158788935 -91898919 + MER5A DNA MER1_type 55 187 -2 2322 64 3 14 chr2 158789035 158789332 -91898522 + AluSc SINE Alu 1 294 -15 560 100 0 0 chr2 158789427 158789507 -91898347 + MADE1 DNA Mariner 1 80 0 186 286 0 0 chr2 158789963 158790012 -91897842 - MIR SINE MIR -98 110 62 216 0 0 0 chr2 158790651 158790675 -91897179 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 287 289 0 52 chr2 158791414 158791511 -91896343 - L2 LINE L2 0 3313 3222 1751 172 3 7 chr2 158791526 158791817 -91896037 + AluJb SINE Alu 3 292 -20 207 100 0 0 chr2 158793425 158793455 -91894399 + (CA)n Simple_repeat Simple_repeat 1 30 0 633 333 82 0 chr2 158794100 158794331 -91893523 - MIR SINE MIR 0 262 13 1416 81 38 81 chr2 158794374 158794609 -91893245 - AluSx SINE Alu -7 303 79 484 120 0 0 chr2 158794725 158794800 -91893054 - AluSx SINE Alu -237 75 1 650 365 16 35 chr2 158796509 158796821 -91891033 + L2 LINE L2 2967 3272 0 766 309 69 24 chr2 158796845 158797220 -91890634 - L2 LINE L2 -1 3312 2921 2366 87 0 10 chr2 158797883 158798183 -91889671 + AluSq SINE Alu 1 297 -16 34 42 0 0 chr2 158798307 158798355 -91889499 + AT_rich Low_complexity Low_complexity 1 48 0 28 0 0 0 chr2 158799267 158799295 -91888559 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 158799491 158799521 -91888333 + AT_rich Low_complexity Low_complexity 1 30 0 235 187 19 93 chr2 158799653 158799760 -91888094 + Charlie7 DNA MER1_type 2514 2612 0 22 0 0 0 chr2 158804086 158804108 -91883746 + AT_rich Low_complexity Low_complexity 1 22 0 234 364 73 0 chr2 158804190 158804300 -91883554 + L3 LINE CR1 1459 1576 -1 425 271 8 10 chr2 158805407 158805528 -91882326 - MIR SINE MIR -61 147 42 206 269 51 51 chr2 158805613 158805691 -91882163 - MER5B DNA MER1_type -75 103 26 2117 226 155 20 chr2 158805986 158806651 -91881203 + MER63C DNA MER1_type 124 893 -167 2346 45 0 21 chr2 158806651 158806964 -91880890 + AluY SINE Alu 1 307 0 2117 226 155 20 chr2 158806964 158807008 -91880846 + MER63C DNA MER1_type 893 930 0 285 351 67 15 chr2 158807017 158807151 -91880703 - MIR3 SINE MIR -66 142 2 6019 161 17 39 chr2 158807386 158808594 -91879260 + L1MC1 LINE L1 292 1473 -4953 * 6285 219 54 49 chr2 158808592 158808814 -91879040 + L1MC1 LINE L1 3020 3240 -3186 1526 190 7 35 chr2 158808814 158809103 -91878751 + AluJo SINE Alu 1 281 -31 6285 219 54 49 chr2 158809103 158810912 -91876942 + L1MC1 LINE L1 3240 5060 -1366 6174 156 23 8 chr2 158810913 158811338 -91876516 + L1MC1 LINE L1 5262 5679 -934 985 194 131 91 chr2 158811338 158811689 -91876165 - MLT1A1 LTR MaLR 0 365 1 6174 156 23 8 chr2 158811689 158812595 -91875259 + L1MC1 LINE L1 5679 6607 -6 381 230 34 95 chr2 158812629 158812777 -91875077 - L1MC5 LINE L1 -845 7116 6978 248 265 0 48 chr2 158813002 158813085 -91874769 + MIR SINE MIR 76 154 -108 1043 153 5 81 chr2 158813413 158813635 -91874219 - MER20 DNA MER1_type -1 218 14 433 104 0 0 chr2 158813998 158814065 -91873789 - Alu SINE Alu -7 302 236 201 39 0 0 chr2 158814622 158814648 -91873206 + (TA)n Simple_repeat Simple_repeat 2 27 0 686 270 116 25 chr2 158814767 158815104 -91872750 + LTR33A LTR ERVL 157 521 -2 194 270 16 32 chr2 158815143 158815206 -91872648 + L2 LINE L2 3210 3271 -1 357 184 24 80 chr2 158815410 158815535 -91872319 - L1ME3A LINE L1 -91 6079 5962 31 26 0 0 chr2 158815651 158815689 -91872165 + AT_rich Low_complexity Low_complexity 1 38 0 2489 58 0 3 chr2 158815689 158815998 -91871856 - AluY SINE Alu -3 308 1 1078 269 47 41 chr2 158816001 158816466 -91871388 - L1MC5 LINE L1 -445 7516 7049 2735 225 85 56 chr2 158816981 158817934 -91869920 - L1ME2 LINE L1 -8 6951 6027 315 0 0 0 chr2 158817934 158817969 -91869885 + (TG)n Simple_repeat Simple_repeat 2 36 0 2735 225 85 56 chr2 158817969 158818628 -91869226 - L1ME2 LINE L1 -932 6027 5238 252 111 0 0 chr2 158818628 158818673 -91869181 - LTR66 LTR ERVL -172 438 394 2735 225 85 56 chr2 158818673 158818826 -91869028 - L1ME2 LINE L1 -1721 5238 5091 3315 266 92 36 chr2 158818845 158819907 -91867947 - L1ME2 LINE L1 -2223 4718 3522 1999 118 4 0 chr2 158819907 158820187 -91867667 - AluSg SINE Alu -28 282 2 3315 266 92 36 chr2 158820187 158820841 -91867013 - L1ME2 LINE L1 -3419 3522 2906 32 26 0 0 chr2 158820863 158820902 -91866952 + AT_rich Low_complexity Low_complexity 1 39 0 1695 294 45 33 chr2 158822069 158823788 -91864066 - L1ME2 LINE L1 -4209 2913 960 504 253 20 7 chr2 158824153 158824299 -91863555 - L1ME2 LINE L1 -5990 433 286 904 243 212 21 chr2 158824308 158824596 -91863258 - MLT2B1 LTR ERVL 0 520 178 849 95 16 32 chr2 158824629 158824755 -91863099 - AluSq/x SINE Alu -188 124 1 969 174 12 0 chr2 158824761 158824933 -91862921 - MLT2B1 LTR ERVL -346 174 1 767 263 53 0 chr2 158824934 158825143 -91862711 - L1ME2 LINE L1 -6143 280 61 26 0 0 0 chr2 158825369 158825395 -91862459 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 158827143 158827165 -91860689 + AT_rich Low_complexity Low_complexity 1 22 0 30 83 0 0 chr2 158827788 158827860 -91859994 + AT_rich Low_complexity Low_complexity 1 72 0 1716 167 17 0 chr2 158828380 158828674 -91859180 + AluSx SINE Alu 3 301 -11 926 188 25 14 chr2 158829146 158829344 -91858510 - MSTD LTR MaLR 0 396 225 1766 174 0 10 chr2 158829961 158830271 -91857583 - AluJb SINE Alu -3 309 3 261 0 0 0 chr2 158831250 158831279 -91856575 + (CA)n Simple_repeat Simple_repeat 2 30 0 2208 98 3 10 chr2 158833465 158833772 -91854082 + AluSq SINE Alu 1 305 -8 5017 35 0 2 chr2 158834930 158835526 -91852328 + L1PA5 LINE L1 5545 6139 -15 372 22 0 0 chr2 158835526 158835571 -91852283 + (TA)n Simple_repeat Simple_repeat 2 46 0 3653 173 14 0 chr2 158835571 158836231 -91851623 + L1P LINE L1 3777 4445 -1701 1704 273 69 18 chr2 158836356 158837139 -91850715 - L1MDa LINE L1 -1822 4718 3896 23 33 0 0 chr2 158837253 158837283 -91850571 + AT_rich Low_complexity Low_complexity 1 30 0 427 291 42 13 chr2 158837291 158837528 -91850326 - L1MDa LINE L1 -2694 3846 3603 7175 153 29 31 chr2 158837608 158839974 -91847880 - L1MA4A LINE L1 -6 6297 3925 1721 218 54 10 chr2 158839964 158840217 -91847637 - L1 LINE L1 -2461 5104 4863 * 2105 161 53 0 chr2 158840217 158840597 -91847257 - MER57A LTR ERV1 0 403 4 1721 218 54 10 chr2 158840597 158840903 -91846951 - L1 LINE L1 -2702 4863 4475 555 141 4 2 chr2 158840903 158841008 -91846846 - L1 LINE L1 -3924 3641 3536 * 2634 178 47 18 chr2 158840994 158841551 -91846303 - L1 LINE L1 -6344 1222 358 2047 106 17 0 chr2 158841561 158841853 -91846001 - AluSx SINE Alu -15 297 1 971 276 66 11 chr2 158841871 158842324 -91845530 - L1MDa LINE L1 -2980 3560 3083 230 250 21 10 chr2 158842327 158842423 -91845431 - L1MDa LINE L1 -3967 2573 2477 3388 178 21 3 chr2 158842488 158843147 -91844707 - L1MB3 LINE L1 -1 6182 5512 617 320 101 68 chr2 158843440 158844072 -91843782 - L1MDa LINE L1 -4440 2100 1448 298 331 18 4 chr2 158844915 158845092 -91842762 - MIR SINE MIR 0 262 21 181 337 84 68 chr2 158845477 158845667 -91842187 + L2 LINE L2 3075 3267 -5 1321 95 5 20 chr2 158846013 158846213 -91841641 + L1PA6 LINE L1 5957 6153 -1 1978 214 124 56 chr2 158847303 158848076 -91839778 + LTR1B LTR ERV1 1 826 0 304 379 147 34 chr2 158849346 158849760 -91838094 + L2 LINE L2 2808 3268 -4 1604 128 15 0 chr2 158850184 158850450 -91837404 + L1MA2 LINE L1 6035 6304 0 304 366 72 21 chr2 158850510 158850704 -91837150 - MIR SINE MIR -5 257 54 448 188 24 0 chr2 158851247 158851332 -91836522 - L1MC1 LINE L1 -6 6327 6241 3787 92 2 0 chr2 158851373 158851886 -91835968 - MER75 DNA T2_type 0 514 1 238 356 11 0 chr2 158852036 158852126 -91835728 - MIR SINE MIR 0 262 172 7101 133 20 36 chr2 158852964 158854213 -91833641 - Tigger3b DNA MER2_type -1 1230 2 840 284 26 4 chr2 158854466 158854695 -91833159 - MIR SINE MIR 0 262 29 336 331 31 0 chr2 158854723 158854850 -91833004 - MER20B DNA MER1_type -592 191 61 253 258 0 0 chr2 158854931 158854993 -91832861 + (CA)n Simple_repeat Simple_repeat 1 62 0 250 258 10 21 chr2 158855127 158855224 -91832630 + A-rich Low_complexity Low_complexity 2 97 0 861 321 58 28 chr2 158855348 158855709 -91832145 - L3 LINE CR1 -3 1574 1203 209 333 0 19 chr2 158855874 158855982 -91831872 + (TA)n Simple_repeat Simple_repeat 1 106 0 1202 208 175 16 chr2 158857689 158858117 -91829737 + LTR54B LTR ERV1 1 496 -2 522 267 6 25 chr2 158858957 158859118 -91828736 - L1MA10 LINE L1 -1 6333 6176 24 0 0 0 chr2 158859328 158859352 -91828502 + AT_rich Low_complexity Low_complexity 1 24 0 382 296 16 32 chr2 158859989 158860114 -91827740 - MIR SINE MIR -38 224 102 312 304 29 66 chr2 158860205 158860438 -91827416 - MIR SINE MIR -34 228 5 206 191 0 32 chr2 158860592 158860655 -91827199 + (TATG)n Simple_repeat Simple_repeat 2 62 0 365 321 46 4 chr2 158860661 158860826 -91827028 - MIR SINE MIR -67 141 17 209 316 166 43 chr2 158861300 158861439 -91826415 - L2 LINE L2 -457 2857 2702 288 313 99 30 chr2 158861492 158861623 -91826231 - MIR3 SINE MIR -4 204 65 321 145 33 0 chr2 158862080 158862151 -91825703 + L1ME LINE L1 5538 5599 -567 314 281 79 55 chr2 158862825 158862989 -91824865 + MER5A DNA MER1_type 3 170 -19 229 262 119 60 chr2 158863021 158863105 -91824749 + L2 LINE L2 3217 3305 -8 28 71 0 0 chr2 158863423 158863479 -91824375 + AT_rich Low_complexity Low_complexity 1 56 0 950 203 4 5 chr2 158864080 158864291 -91823563 - L1M4 LINE L1 -1168 4978 4769 1145 202 0 5 chr2 158864294 158864507 -91823347 - AluJb SINE Alu -22 290 79 1791 158 28 51 chr2 158864509 158864938 -91822916 - L1M4 LINE L1 -1368 4778 4360 5724 154 28 24 chr2 158864945 158865761 -91822093 + L1MA9 LINE L1 4981 5800 -512 350 89 0 18 chr2 158865761 158865817 -91822037 + (CA)n Simple_repeat Simple_repeat 2 56 0 5724 154 28 24 chr2 158865817 158866333 -91821521 + L1MA9 LINE L1 5800 6312 0 182 270 122 0 chr2 158866759 158866833 -91821021 + MIR SINE MIR 178 260 -2 * 242 193 23 125 chr2 158866828 158866916 -91820938 - MIR SINE MIR -64 198 120 183 339 17 0 chr2 158867548 158867607 -91820247 - MIR SINE MIR -104 104 45 25 0 0 0 chr2 158868168 158868193 -91819661 + AT_rich Low_complexity Low_complexity 1 25 0 359 327 125 14 chr2 158868634 158868842 -91819012 + MIR SINE MIR 2 232 -30 2902 163 12 68 chr2 158869140 158869718 -91818136 - MLT2B3 LTR ERVL 0 554 9 328 127 0 18 chr2 158869785 158869840 -91818014 + MER5B DNA MER1_type 1 54 -124 396 0 0 0 chr2 158869857 158869901 -91817953 + (TA)n Simple_repeat Simple_repeat 2 45 0 587 247 6 41 chr2 158870028 158870124 -91817730 + MER5C DNA MER1_type 1 90 -234 2127 170 20 0 chr2 158870124 158870482 -91817372 - MLT1A1 LTR MaLR 0 365 1 587 247 6 41 chr2 158870482 158870555 -91817299 + MER5C DNA MER1_type 90 164 -160 240 35 0 0 chr2 158871274 158871303 -91816551 + (CTG)n Simple_repeat Simple_repeat 2 30 0 305 283 85 0 chr2 158874207 158874313 -91813541 - MIR SINE MIR -73 135 21 1623 193 25 4 chr2 158875642 158875954 -91811900 + AluJb SINE Alu 1 318 0 2603 55 3 0 chr2 158876107 158876414 -91811440 - AluY SINE Alu -3 308 1 360 64 0 0 chr2 158877452 158877499 -91810355 + (CA)n Simple_repeat Simple_repeat 2 48 0 210 71 0 0 chr2 158878026 158878054 -91809800 + (GGA)n Simple_repeat Simple_repeat 1 28 0 29 0 0 0 chr2 158878146 158878175 -91809679 + AT_rich Low_complexity Low_complexity 1 29 0 228 290 0 0 chr2 158878388 158878450 -91809404 + (TG)n Simple_repeat Simple_repeat 2 63 0 435 326 22 13 chr2 158879208 158879407 -91808447 - MIR SINE MIR -56 206 9 788 301 169 43 chr2 158881350 158881554 -91806300 - L2 LINE L2 0 3313 3136 2172 78 46 3 chr2 158881554 158881837 -91806017 + AluY SINE Alu 1 295 -16 788 301 169 43 chr2 158881837 158882847 -91805007 - L2 LINE L2 -177 3136 1939 4398 114 39 24 chr2 158883103 158883816 -91804038 - L1PA16 LINE L1 -9 6157 5434 1417 104 0 5 chr2 158884351 158884544 -91803310 - AluSp SINE Alu -1 312 121 35943 85 12 11 chr2 158884544 158890672 -91797182 - L1PA6 LINE L1 -10 6144 11 982 112 0 8 chr2 158890685 158890819 -91797035 - AluSp SINE Alu -180 133 1 787 206 186 90 chr2 158890865 158891311 -91796543 + MLT1D LTR MaLR 17 505 0 1944 184 2 137 chr2 158891312 158891389 -91796465 + MLT1D-int LTR MaLR 2 88 -1283 2469 152 18 39 chr2 158891389 158891773 -91796081 + MSTB LTR MaLR 1 379 -47 1886 107 0 30 chr2 158891773 158892067 -91795787 - AluSx SINE Alu 0 305 20 2469 152 18 39 chr2 158892067 158892115 -91795739 + MSTB LTR MaLR 379 426 0 1944 184 2 137 chr2 158892115 158892278 -91795576 + MLT1D-int LTR MaLR 88 271 -1100 282 220 0 0 chr2 158892278 158892354 -91795500 + AluS SINE Alu 231 306 0 1944 184 2 137 chr2 158892354 158892696 -91795158 + MLT1D-int LTR MaLR 271 549 -822 21 0 0 0 chr2 158892943 158892964 -91794890 + AT_rich Low_complexity Low_complexity 1 21 0 211 204 0 0 chr2 158893045 158893094 -91794760 + (TTTG)n Simple_repeat Simple_repeat 4 52 0 187 307 53 0 chr2 158893100 158893175 -91794679 + MER5A DNA MER1_type 61 139 -50 240 346 168 20 chr2 158893251 158893453 -91794401 - MIR SINE MIR -8 254 23 380 284 73 18 chr2 158893820 158893929 -91793925 + MIR SINE MIR 32 146 -116 458 242 81 7 chr2 158894470 158894619 -91793235 - MIR SINE MIR -3 259 100 363 182 0 0 chr2 158896055 158896121 -91791733 - MER69 DNA AcHobo -1 2525 2460 512 242 186 21 chr2 158896135 158896329 -91791525 - MER69 DNA AcHobo -2140 386 161 483 263 19 54 chr2 158896894 158897153 -91790701 - L1MC4 LINE L1 -1 8041 7792 2195 84 3 0 chr2 158897218 158897503 -91790351 - AluY SINE Alu -5 306 21 396 0 0 0 chr2 158897615 158897659 -91790195 + (TG)n Simple_repeat Simple_repeat 2 45 0 268 261 161 22 chr2 158897797 158897977 -91789877 - L1MC4a LINE L1 -458 7350 7146 186 154 31 31 chr2 158898087 158898152 -91789702 + CT-rich Low_complexity Low_complexity 3 67 0 403 196 72 0 chr2 158898200 158898297 -91789557 - L1MC4 LINE L1 -1025 7017 6914 808 301 23 0 chr2 158898553 158898772 -91789082 - MIR SINE MIR -30 232 9 1203 351 83 8 chr2 158899169 158899795 -91788059 - L2 LINE L2 -337 2977 2305 350 298 102 38 chr2 158900067 158900302 -91787552 + MER112 DNA MER1_type 1 250 -10 338 230 163 0 chr2 158900348 158900483 -91787371 - MER5C DNA MER1_type -3 321 165 2283 82 10 7 chr2 158900503 158900797 -91787057 + AluSq SINE Alu 1 295 -18 343 225 169 0 chr2 158900800 158900889 -91786965 - L1MC4 LINE L1 -1339 6703 6600 304 212 221 26 chr2 158900894 158901007 -91786847 - MER5C DNA MER1_type -188 136 2 1476 88 22 0 chr2 158902519 158902745 -91785109 + L1MA5 LINE L1 6066 6296 -4 205 276 103 0 chr2 158902843 158902901 -91784953 - MIR SINE MIR -142 120 57 2063 128 7 0 chr2 158903424 158903713 -91784141 - AluSc SINE Alu -18 291 1 1849 187 16 22 chr2 158903862 158904225 -91783629 - MLT1A1 LTR MaLR 0 365 5 643 338 30 4 chr2 158904581 158904812 -91783042 + MIR SINE MIR 20 256 -6 2061 214 81 31 chr2 158904830 158905450 -91782404 - MER76 LTR ERV -27 661 11 402 0 17 33 chr2 158905475 158905535 -91782319 + (CA)n Simple_repeat Simple_repeat 1 59 0 747 182 29 12 chr2 158905708 158905878 -91781976 - L1MB2 LINE L1 -7 6164 5992 350 327 188 5 chr2 158908043 158908245 -91779609 - MIR SINE MIR -8 254 16 542 278 90 19 chr2 158908597 158908809 -91779045 + MIR SINE MIR 29 255 -7 4013 104 27 22 chr2 158908838 158909474 -91778380 + MER51C LTR ERV1 1 639 -1 363 141 16 0 chr2 158909593 158909657 -91778197 - 7SK RNA RNA 0 193 129 714 120 0 16 chr2 158909744 158909869 -91777985 - 7SK RNA RNA -70 123 1 207 300 80 20 chr2 158909885 158909985 -91777869 + MIR SINE MIR 147 252 -10 562 312 112 27 chr2 158911898 158912392 -91775462 - L2 LINE L2 0 3313 2771 198 118 0 0 chr2 158912392 158912426 -91775428 + (TTCC)n Simple_repeat Simple_repeat 2 35 0 385 268 78 13 chr2 158914604 158914757 -91773097 - MER103 DNA DNA -1 165 3 398 312 147 40 chr2 158914929 158915304 -91772550 - L1MEd LINE L1 -5349 770 356 248 293 0 12 chr2 158915423 158915505 -91772349 - L1MEd LINE L1 -5941 178 98 383 313 119 48 chr2 158916705 158916932 -91770922 + MIR SINE MIR 19 261 -1 449 231 184 0 chr2 158918214 158918361 -91769493 - MER5A DNA MER1_type -3 186 13 356 314 164 23 chr2 158918986 158919206 -91768648 - MIR SINE MIR -5 257 7 21 36 0 0 chr2 158919615 158919643 -91768211 + AT_rich Low_complexity Low_complexity 1 28 0 739 258 45 5 chr2 158919921 158920119 -91767735 - MER63A DNA MER1_type -4 206 1 219 36 0 0 chr2 158920714 158920742 -91767112 + (GA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr2 158922967 158922990 -91764864 + AT_rich Low_complexity Low_complexity 1 23 0 288 293 64 50 chr2 158923308 158923448 -91764406 - MIR3 SINE MIR -27 181 40 1795 153 50 29 chr2 158923822 158924162 -91763692 + MER7A DNA MER2_type 1 345 -1 2247 106 0 0 chr2 158925511 158925795 -91762059 + AluSg SINE Alu 3 286 -24 300 322 103 50 chr2 158925884 158926126 -91761728 - MIR SINE MIR -6 256 2 1604 241 25 84 chr2 158926463 158927114 -91760740 - LTR9 LTR ERV1 0 612 1 233 116 0 23 chr2 158927868 158927911 -91759943 + (TA)n Simple_repeat Simple_repeat 2 43 0 207 167 0 0 chr2 158932238 158932280 -91755574 + (CAT)n Simple_repeat Simple_repeat 3 44 0 302 296 134 0 chr2 158932666 158932808 -91755046 + MER103 DNA DNA 6 166 0 381 43 0 0 chr2 158932939 158932986 -91754868 + (CA)n Simple_repeat Simple_repeat 1 47 0 2225 98 14 0 chr2 158934680 158934806 -91753048 + AluSq SINE Alu 1 124 -189 243 0 0 0 chr2 158934806 158934833 -91753021 + (CA)n Simple_repeat Simple_repeat 2 28 0 2225 98 14 0 chr2 158934833 158935001 -91752853 + AluSq SINE Alu 124 299 -14 22 70 0 0 chr2 158935480 158935523 -91752331 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr2 158935676 158935705 -91752149 + AT_rich Low_complexity Low_complexity 1 29 0 259 333 34 17 chr2 158935852 158935969 -91751885 - MIR SINE MIR -100 162 44 301 360 83 31 chr2 158937399 158937749 -91750105 + L2 LINE L2 2929 3296 -17 225 180 0 0 chr2 158937752 158937802 -91750052 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 31 26 0 0 chr2 158937807 158937845 -91750009 + AT_rich Low_complexity Low_complexity 1 38 0 706 293 0 16 chr2 158938111 158938299 -91749555 - MIR SINE MIR -5 257 73 2004 138 3 3 chr2 158939338 158939629 -91748225 - AluSp SINE Alu -22 291 1 1294 217 79 55 chr2 158940024 158940620 -91747234 - MLT2F LTR ERVL 0 663 5 2122 143 0 0 chr2 158941595 158941896 -91745958 + AluSx SINE Alu 1 301 -11 1742 172 122 45 chr2 158942000 158942291 -91745563 + MLT1D LTR MaLR 1 343 -162 1125 142 42 84 chr2 158942291 158942530 -91745324 + MER30 DNA MER1_type 1 229 -1 1742 172 122 45 chr2 158942530 158942704 -91745150 + MLT1D LTR MaLR 343 502 -3 2034 102 88 0 chr2 158942742 158943025 -91744829 - AluSg SINE Alu -2 308 1 652 322 20 27 chr2 158943576 158943868 -91743986 - MLT1K LTR MaLR -158 430 141 461 254 35 28 chr2 158943961 158944103 -91743751 + MIR SINE MIR 119 261 -1 203 333 152 0 chr2 158944144 158944282 -91743572 + MIR SINE MIR 77 235 -27 190 286 17 101 chr2 158945793 158945912 -91741942 + L2 LINE L2 2587 2695 -619 21 0 0 0 chr2 158946006 158946027 -91741827 + AT_rich Low_complexity Low_complexity 1 21 0 483 285 108 27 chr2 158946545 158946731 -91741123 + MIR SINE MIR 47 247 -15 409 307 69 37 chr2 158947314 158947532 -91740322 + MIR SINE MIR 10 234 -28 389 293 86 14 chr2 158947598 158947738 -91740116 - MER5A DNA MER1_type -5 184 35 907 254 23 8 chr2 158947881 158948137 -91739717 - MIR SINE MIR 0 262 3 246 32 0 0 chr2 158948299 158948330 -91739524 + (TG)n Simple_repeat Simple_repeat 2 32 0 276 238 95 29 chr2 158948945 158949050 -91738804 + L2 LINE L2 3160 3271 -1 1016 289 39 72 chr2 158949445 158949930 -91737924 - L3 LINE CR1 -1 1576 1108 494 311 46 20 chr2 158950231 158950427 -91737427 - MIR SINE MIR -9 253 53 243 237 51 17 chr2 158950430 158950548 -91737306 - MER103 DNA DNA 0 166 45 4030 84 0 25 chr2 158950594 158951162 -91736692 - MER41A LTR ERV1 0 554 1 241 397 71 12 chr2 158951182 158951522 -91736332 - L3 LINE CR1 -597 980 621 5921 146 9 43 chr2 158951662 158952808 -91735046 - HERVH LTR ERV1 -5834 1879 773 1462 191 108 8 chr2 158952820 158953182 -91734672 - HERVH LTR ERV1 -7315 398 1 1902 164 37 20 chr2 158953182 158953590 -91734264 - LTR7 LTR ERV1 0 450 36 7867 168 6 9 chr2 158953616 158955121 -91732733 + HERVH LTR ERV1 6214 7713 0 2304 134 43 25 chr2 158955123 158955563 -91732291 + LTR7 LTR ERV1 3 450 0 3266 222 90 46 chr2 158955563 158957279 -91730575 + L1MCb LINE L1 7 1801 -4763 2205 134 3 0 chr2 158957279 158957585 -91730269 + AluSx SINE Alu 1 307 -5 358 111 4 2 chr2 158957585 158957829 -91730025 + AluSp SINE Alu 1 302 -1 312 213 38 0 chr2 158957829 158957909 -91729945 + L1M1 LINE L1 2907 2989 -4576 349 358 159 12 chr2 158958025 158958352 -91729502 - L3 LINE CR1 -1070 507 133 281 258 61 0 chr2 158959185 158959291 -91728563 + MIR SINE MIR 45 162 -46 966 242 56 3 chr2 158959374 158959680 -91728174 - MER113 DNA MER1_type? -34 487 166 839 139 0 0 chr2 158959690 158959819 -91728035 - AluSg/x SINE Alu 0 312 184 226 231 108 15 chr2 158959822 158959952 -91727902 - MER113 DNA MER1_type? -378 143 2 32 0 0 0 chr2 158960001 158960033 -91727821 + AT_rich Low_complexity Low_complexity 1 32 0 414 266 48 20 chr2 158961332 158961491 -91726363 - MIR SINE MIR -55 207 45 993 175 42 23 chr2 158961758 158961975 -91725879 + Tigger1 DNA MER2_type 1 221 -2197 1024 159 0 40 chr2 158961986 158962162 -91725692 - AluJb SINE Alu -6 306 138 759 109 0 34 chr2 158962165 158962284 -91725570 + Tigger1 DNA MER2_type 219 333 -2085 1755 198 29 8 chr2 158962319 158962693 -91725161 + Tigger1 DNA MER2_type 277 658 -1760 * 2942 131 4 25 chr2 158962683 158962953 -91724901 + Tigger1 DNA MER2_type 987 1244 -1174 2104 134 3 0 chr2 158962953 158963245 -91724609 - AluSp SINE Alu -19 294 2 2942 131 4 25 chr2 158963245 158963461 -91724393 + Tigger1 DNA MER2_type 1244 1463 -955 1079 190 5 15 chr2 158963463 158963663 -91724191 - AluJb SINE Alu -80 232 35 5953 122 8 8 chr2 158963663 158963886 -91723968 + Tigger1 DNA MER2_type 1449 1671 -747 2011 126 44 47 chr2 158963886 158964251 -91723603 - THE1B LTR MaLR 0 364 1 5953 122 8 8 chr2 158964251 158964997 -91722857 + Tigger1 DNA MER2_type 1670 2418 0 243 0 0 0 chr2 158964997 158965024 -91722830 + (TA)n Simple_repeat Simple_repeat 1 27 0 259 250 28 0 chr2 158967489 158967561 -91720293 - MIR SINE MIR -95 167 94 232 255 202 24 chr2 158967586 158967794 -91720060 + LTR33A LTR ERVL 3 247 -276 475 331 39 0 chr2 158968645 158968823 -91719031 - MIR SINE MIR 0 262 78 405 318 158 50 chr2 158969069 158969683 -91718171 + L3 LINE CR1 739 1418 -159 1803 147 50 0 chr2 158970139 158970418 -91717436 - AluJb SINE Alu -17 295 3 265 347 32 0 chr2 158970660 158970755 -91717099 + L3 LINE CR1 1469 1566 -11 2380 125 13 19 chr2 158970865 158971242 -91716612 + THE1C LTR MaLR 1 375 0 9315 113 72 42 chr2 158971242 158972776 -91715078 + THE1C-int LTR MaLR 1 1580 0 2309 134 11 26 chr2 158972776 158973157 -91714697 + THE1C LTR MaLR 1 375 0 211 300 88 12 chr2 158973307 158973387 -91714467 + MIR3 SINE MIR 87 172 -36 853 291 93 70 chr2 158974177 158975007 -91712847 - L2 LINE L2 0 3313 2462 208 291 0 13 chr2 158975392 158975471 -91712383 + A-rich Low_complexity Low_complexity 4 81 0 234 191 0 21 chr2 158975807 158975854 -91712000 + CT-rich Low_complexity Low_complexity 3 48 0 368 320 40 15 chr2 158976767 158976938 -91710916 + MIR SINE MIR 17 190 -62 1669 190 10 0 chr2 158977125 158977420 -91710434 + AluJo SINE Alu 1 298 -14 508 281 214 0 chr2 158977868 158978078 -91709776 - MIR SINE MIR -5 257 3 577 281 35 30 chr2 158978446 158978649 -91709205 - MIR SINE MIR -10 252 49 42919 33 21 1 chr2 158978649 158984680 -91703174 + L1PA2 LINE L1 1 6154 -1 2109 145 99 18 chr2 158984784 158985178 -91702676 - MSTA LTR MaLR 0 428 3 2574 145 7 5 chr2 158985182 158985596 -91702258 - MSTA-int LTR MaLR 0 1651 1237 * 5531 172 85 1 chr2 158985590 158986604 -91701250 - MSTA-int LTR MaLR -552 1099 1 1209 138 61 22 chr2 158986604 158986835 -91701019 - MSTA LTR MaLR 0 428 189 2317 85 0 0 chr2 158986835 158987129 -91700725 - AluY SINE Alu -17 294 1 937 179 6 6 chr2 158988417 158988596 -91699258 + L1 LINE L1 3559 3737 -2409 276 242 0 0 chr2 158989860 158989922 -91697932 + CT-rich Low_complexity Low_complexity 3 64 0 2560 191 2 12 chr2 158990617 158991124 -91696730 + L1 LINE L1 3727 4228 -1918 940 196 29 0 chr2 158991135 158991339 -91696515 + L1 LINE L1 5057 5266 -880 * 6084 129 38 5 chr2 158991334 158992436 -91695418 + L1MA5A LINE L1 5156 6293 -4 1647 167 0 8 chr2 158992661 158992925 -91694929 + AluJb SINE Alu 40 301 -11 1534 125 0 9 chr2 158992964 158993196 -91694658 + MER30 DNA MER1_type 1 230 0 24 32 0 0 chr2 158993658 158993689 -91694165 + AT_rich Low_complexity Low_complexity 1 31 0 450 268 106 24 chr2 158993758 158994087 -91693767 + L1M4 LINE L1 2209 2564 -3582 6293 133 4 4 chr2 158994274 158995270 -91692584 + L1PA8A LINE L1 4008 5003 -1143 4456 117 91 56 chr2 158995276 158995503 -91692351 + L1PA8A LINE L1 5264 5482 -649 2264 100 7 3 chr2 158995503 158995803 -91692051 + AluSq SINE Alu 1 301 -12 4456 117 91 56 chr2 158995803 158996414 -91691440 + L1PA8A LINE L1 5482 6131 0 636 133 9 44 chr2 158996417 158996530 -91691324 + L1M1 LINE L1 118 226 -7339 10957 113 24 3 chr2 158996534 158998270 -91689584 + L1M1 LINE L1 1845 3617 -3948 6283 99 5 2 chr2 158998470 158999827 -91688027 - L1PA14 LINE L1 0 6161 4799 252 0 0 0 chr2 158999844 158999872 -91687982 + (TTA)n Simple_repeat Simple_repeat 3 30 0 2837 18 0 0 chr2 158999872 159000198 -91687656 - L1PA3 LINE L1 -18 6137 5812 13274 189 17 3 chr2 159000199 159002848 -91685006 - L1PA14 LINE L1 -1364 4782 2096 313 278 62 57 chr2 159003241 159003417 -91684437 + L1ME4a LINE L1 5839 6015 -106 27 29 0 0 chr2 159003445 159003479 -91684375 + AT_rich Low_complexity Low_complexity 1 34 0 180 310 23 85 chr2 159005388 159005517 -91682337 - L2 LINE L2 -588 2726 2606 516 285 129 46 chr2 159005525 159005664 -91682190 + MER102b DNA MER1_type 2 128 -213 1583 193 0 27 chr2 159005664 159005959 -91681895 + AluJb SINE Alu 1 287 -25 516 285 129 46 chr2 159005959 159006082 -91681772 + MER102b DNA MER1_type 128 286 -55 284 301 0 0 chr2 159006756 159006839 -91681015 + (TA)n Simple_repeat Simple_repeat 1 83 0 233 127 0 36 chr2 159007224 159007234 -91680620 + (TTTTC)n Simple_repeat Simple_repeat 2 11 -43 2915 69 0 65 chr2 159007234 159007667 -91680187 - L1PA5 LINE L1 0 6154 5750 233 127 0 36 chr2 159007667 159007711 -91680143 + (TTTTC)n Simple_repeat Simple_repeat 11 54 0 40344 70 9 1 chr2 159007713 159013815 -91674039 - L1PA3 LINE L1 -3 6152 2 425 341 24 12 chr2 159014448 159014612 -91673242 + MER5A DNA MER1_type 2 167 -22 367 249 52 92 chr2 159014481 159014654 -91673200 - MER5A DNA MER1_type -22 167 2 * 21 57 0 0 chr2 159014914 159014949 -91672905 + AT_rich Low_complexity Low_complexity 1 35 0 7508 28 27 11 chr2 159014972 159016108 -91671746 - L1PA4 LINE L1 -2 6153 5025 3024 251 43 7 chr2 159016115 159017118 -91670736 - L1M4 LINE L1 -2887 3259 2221 1026 171 31 61 chr2 159017142 159017291 -91670563 - L1MCa LINE L1 -6187 239 98 2330 104 0 0 chr2 159017291 159017600 -91670254 - AluSg1 SINE Alu 0 309 1 1026 171 31 61 chr2 159017600 159017678 -91670176 - L1MCa LINE L1 -6328 98 19 2472 57 0 0 chr2 159017683 159017980 -91669874 - AluY SINE Alu -14 297 1 36 70 0 0 chr2 159017994 159018065 -91669789 + AT_rich Low_complexity Low_complexity 1 71 0 7217 182 83 82 chr2 159018148 159018755 -91669099 - L1MC3 LINE L1 0 7768 7163 283 350 0 0 chr2 159018755 159018852 -91669002 - MLT1F1 LTR MaLR -436 131 35 7217 182 83 82 chr2 159018852 159020169 -91667685 - L1MC3 LINE L1 -605 7163 5746 3650 236 90 10 chr2 159020167 159021334 -91666520 - L1MC3 LINE L1 -919 5210 3951 * 317 295 67 47 chr2 159021374 159021523 -91666331 - L1MC3 LINE L1 -5346 773 622 1271 269 96 45 chr2 159021859 159022386 -91665468 + MLT1E LTR MaLR 1 560 -33 2265 119 0 0 chr2 159022386 159022697 -91665157 - AluSq SINE Alu -1 312 2 1271 269 96 45 chr2 159022697 159022731 -91665123 + MLT1E LTR MaLR 560 591 -2 228 111 0 0 chr2 159022858 159022894 -91664960 + (GA)n Simple_repeat Simple_repeat 2 37 0 275 283 105 11 chr2 159024226 159024363 -91663491 + MIR SINE MIR 28 186 -76 315 0 0 0 chr2 159024694 159024729 -91663125 + (GA)n Simple_repeat Simple_repeat 2 36 0 22 35 0 0 chr2 159026480 159026509 -91661345 + AT_rich Low_complexity Low_complexity 1 29 0 24 32 0 0 chr2 159026714 159026745 -91661109 + AT_rich Low_complexity Low_complexity 1 31 0 234 0 0 0 chr2 159027092 159027118 -91660736 + (GA)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr2 159027734 159027755 -91660099 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 159028708 159028741 -91659113 + AT_rich Low_complexity Low_complexity 1 33 0 25 65 0 0 chr2 159028942 159028988 -91658866 + AT_rich Low_complexity Low_complexity 1 46 0 521 277 84 0 chr2 159029000 159029166 -91658688 + MIR SINE MIR 72 251 -11 1515 103 23 5 chr2 159029190 159029404 -91658450 - AluSg SINE Alu -92 218 1 1464 170 27 88 chr2 159030165 159030345 -91657509 + AluJo SINE Alu 1 154 -158 2086 142 0 0 chr2 159030345 159030641 -91657213 + AluSq SINE Alu 1 296 -17 1464 170 27 88 chr2 159030641 159030789 -91657065 + AluJo SINE Alu 154 309 -3 315 200 0 31 chr2 159031355 159031420 -91656434 + L2 LINE L2 3206 3268 -4 2376 81 0 7 chr2 159032497 159032804 -91655050 + AluSq SINE Alu 1 305 -8 414 293 115 44 chr2 159032872 159033665 -91654189 + L1MEd LINE L1 835 3504 -2625 691 278 109 54 chr2 159033695 159034654 -91653200 + L1MEd LINE L1 3572 4583 -1546 853 204 7 0 chr2 159034655 159034807 -91653047 + FRAM SINE Alu 1 152 -24 567 255 22 54 chr2 159034945 159035223 -91652631 + L1MEd LINE L1 4768 5036 -1093 259 276 26 35 chr2 159035273 159035389 -91652465 + L1MCa LINE L1 1575 1689 -4737 311 309 61 24 chr2 159035998 159036163 -91651691 + L1M4 LINE L1 4099 4269 -1877 295 336 0 84 chr2 159037874 159038005 -91649849 - L2 LINE L2 -2 3311 3192 526 259 98 11 chr2 159039036 159039210 -91648644 + MIR SINE MIR 14 202 -60 706 350 90 28 chr2 159039211 159039737 -91648117 + L2 LINE L2 2754 3311 -2 2550 56 0 0 chr2 159039853 159040157 -91647697 + AluY SINE Alu 1 304 -7 278 287 37 28 chr2 159042071 159042179 -91645675 - L3 LINE CR1 -2 1575 1467 232 307 34 0 chr2 159042592 159042680 -91645174 - MIR SINE MIR -12 250 160 243 103 0 0 chr2 159044668 159044707 -91643147 + (TG)n Simple_repeat Simple_repeat 2 40 0 342 0 0 0 chr2 159045086 159045124 -91642730 + (TC)n Simple_repeat Simple_repeat 1 38 0 * 450 0 0 0 chr2 159045123 159045173 -91642681 + (CA)n Simple_repeat Simple_repeat 1 50 0 237 108 0 0 chr2 159046857 159046894 -91640960 + (TA)n Simple_repeat Simple_repeat 1 37 0 222 333 97 0 chr2 159046960 159047032 -91640822 + L2 LINE L2 3216 3294 -19 6854 110 24 39 chr2 159047263 159047694 -91640160 + L1MA5A LINE L1 4921 5357 -940 2198 114 7 0 chr2 159047694 159048000 -91639854 + AluSx SINE Alu 3 310 -2 6854 110 24 39 chr2 159048000 159048946 -91638908 + L1MA5A LINE L1 5357 6290 -7 348 24 0 0 chr2 159051823 159051872 -91635982 + (CA)n Simple_repeat Simple_repeat 1 90 0 348 24 0 0 chr2 159051872 159051913 -91635941 + (CA)n Simple_repeat Simple_repeat 1 41 0 238 125 21 42 chr2 159052585 159052633 -91635221 - L3 LINE CR1 -1257 320 274 685 271 48 0 chr2 159053394 159053604 -91634250 - MIR SINE MIR -1 261 42 231 323 10 40 chr2 159055581 159055680 -91632174 - MER102b DNA MER1_type 0 341 246 306 0 0 0 chr2 159055751 159055785 -91632069 + (TG)n Simple_repeat Simple_repeat 2 35 0 30 27 0 0 chr2 159055910 159055947 -91631907 + AT_rich Low_complexity Low_complexity 1 37 0 37 0 0 0 chr2 159056589 159056626 -91631228 + AT_rich Low_complexity Low_complexity 1 37 0 219 339 17 0 chr2 159057281 159057340 -91630514 + MIR SINE MIR 16 75 -187 1639 180 31 48 chr2 159057346 159057701 -91630153 + MLT1A2 LTR MaLR 3 351 -23 200 116 0 70 chr2 159058239 159058282 -91629572 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 2390 67 0 3 chr2 159060259 159060578 -91627276 - AluY SINE Alu 0 311 2 229 310 0 10 chr2 159060730 159060830 -91627024 + L1ME4a LINE L1 3950 4048 -2098 22 56 0 0 chr2 159061104 159061140 -91626714 + AT_rich Low_complexity Low_complexity 1 36 0 254 259 70 28 chr2 159061239 159061382 -91626472 + L1ME4a LINE L1 4474 4622 -1524 357 305 64 80 chr2 159061393 159061921 -91625933 + L1ME4a LINE L1 4614 5133 -1013 556 279 71 74 chr2 159062058 159062397 -91625457 + L1ME4a LINE L1 5325 5664 -457 2079 123 3 0 chr2 159062397 159062697 -91625157 + AluSx SINE Alu 1 301 -11 556 279 71 74 chr2 159062697 159063073 -91624781 + L1ME4a LINE L1 5664 6014 -107 465 283 158 5 chr2 159063875 159064124 -91623730 + L2 LINE L2 2763 3046 -267 423 0 0 0 chr2 159064387 159064434 -91623420 + (TG)n Simple_repeat Simple_repeat 2 48 0 233 314 14 0 chr2 159064589 159064659 -91623195 + L2 LINE L2 3235 3305 -8 210 71 0 0 chr2 159064831 159064859 -91622995 + (TC)n Simple_repeat Simple_repeat 1 28 0 2120 137 30 9 chr2 159064873 159065210 -91622644 + MER2 DNA MER2_type 1 344 0 336 235 59 0 chr2 159065211 159065296 -91622558 - L1MC4 LINE L1 -1339 6703 6614 513 262 30 30 chr2 159065357 159065521 -91622333 - MIR3 SINE MIR -16 192 29 268 307 102 18 chr2 159065579 159065745 -91622109 - MIR SINE MIR -82 180 1 1197 238 86 31 chr2 159066033 159066416 -91621438 + MLT1C LTR MaLR 3 406 -61 383 192 350 0 chr2 159067307 159067427 -91620427 + MIR SINE MIR 89 250 -12 209 357 56 24 chr2 159067704 159067830 -91620024 + L2 LINE L2 3180 3309 -4 345 271 65 7 chr2 159068068 159068223 -91619631 - MER104 DNA Tc2 -3 177 14 1602 134 47 0 chr2 159068802 159069079 -91618775 - L1MA8 LINE L1 -3 6288 5999 23 33 0 0 chr2 159069325 159069355 -91618499 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 159070442 159070464 -91617390 + AT_rich Low_complexity Low_complexity 1 22 0 209 318 34 23 chr2 159071586 159071674 -91616180 - MIR3 SINE MIR -10 198 110 1981 158 7 0 chr2 159072555 159072865 -91614989 + AluJb SINE Alu 1 312 0 271 279 13 0 chr2 159072868 159072947 -91614907 + GA-rich Low_complexity Low_complexity 3 82 0 199 330 11 34 chr2 159073131 159073219 -91614635 - MIR3 SINE MIR 0 208 123 211 313 0 38 chr2 159073954 159074034 -91613820 + L3b LINE CR1 1369 1445 -138 2062 100 30 0 chr2 159074035 159074306 -91613548 + AluSg SINE Alu 1 279 -31 283 82 0 20 chr2 159075335 159075384 -91612470 + L1PB4 LINE L1 6100 6147 -9 1938 144 10 0 chr2 159076442 159076733 -91611121 + AluSx SINE Alu 1 294 -18 934 273 120 3 chr2 159078171 159078504 -91609350 + MLT1G1 LTR MaLR 222 593 -2 388 151 261 34 chr2 159078940 159079059 -91608795 + MIR SINE MIR 110 255 -7 367 259 133 7 chr2 159081806 159081941 -91605913 + MIR SINE MIR 97 248 -14 2210 131 0 0 chr2 159081950 159082255 -91605599 + AluSg SINE Alu 1 305 -5 215 111 0 22 chr2 159082292 159082337 -91605517 + (TAG)n Simple_repeat Simple_repeat 1 44 0 1915 135 0 39 chr2 159082484 159082796 -91605058 + AluJb SINE Alu 7 306 -6 395 267 22 22 chr2 159083443 159083578 -91604276 + L2 LINE L2 3179 3313 0 235 287 45 38 chr2 159085537 159085694 -91602160 - L1ME LINE L1 -295 5826 5669 5462 97 20 15 chr2 159085735 159086583 -91601271 + L1PA14 LINE L1 5308 6159 -2 255 239 14 14 chr2 159086586 159086657 -91601197 - L1ME LINE L1 -497 5624 5554 361 268 146 50 chr2 159086866 159087105 -91600749 - L1ME LINE L1 -900 5246 4985 734 276 20 5 chr2 159087318 159087514 -91600340 + MIR SINE MIR 8 206 -56 594 184 57 0 chr2 159088012 159088153 -91599701 + L1PA13 LINE L1 6011 6159 -4 866 160 7 0 chr2 159088261 159088405 -91599449 - L1MC1 LINE L1 -6 6327 6183 312 295 0 21 chr2 159088406 159088501 -91599353 + MIR SINE MIR 108 200 -62 3867 156 24 24 chr2 159088529 159088682 -91599172 - L1MC1 LINE L1 -173 6160 6008 2356 77 30 0 chr2 159088682 159088980 -91598874 - AluY SINE Alu -4 307 1 3867 156 24 24 chr2 159088980 159089572 -91598282 - L1MC1 LINE L1 -324 6009 5415 13578 169 50 6 chr2 159089587 159092132 -91595722 + L1M1 LINE L1 36 2692 -4873 899 180 14 0 chr2 159092128 159092402 -91595452 - L1MC1 LINE L1 -743 5403 5152 * 386 237 0 10 chr2 159093835 159093932 -91593922 - L1MD3 LINE L1 -355 7640 7545 213 254 210 36 chr2 159094619 159094757 -91593097 + MIR SINE MIR 101 262 0 2219 102 7 7 chr2 159095451 159095754 -91592100 - AluSq SINE Alu -10 303 1 343 271 136 73 chr2 159096438 159096615 -91591239 + MER5A DNA MER1_type 2 189 0 297 197 0 0 chr2 159097005 159097071 -91590783 + CT-rich Low_complexity Low_complexity 1 66 0 268 160 20 0 chr2 159099510 159099560 -91588294 - L2 LINE L2 -1 3312 3262 248 194 119 0 chr2 159100503 159100570 -91587284 - LTR58 LTR ERV1 -232 447 373 213 146 0 0 chr2 159101170 159101218 -91586636 + (CA)n Simple_repeat Simple_repeat 2 49 0 383 253 74 0 chr2 159102193 159102288 -91585566 - MIR SINE MIR -66 196 95 716 180 19 12 chr2 159103262 159103423 -91584431 - MER65C LTR ERV1 0 461 300 644 230 213 10 chr2 159103530 159103826 -91584028 - MER65C LTR ERV1 -105 356 1 288 161 115 92 chr2 159104657 159104744 -91583110 - L2 LINE L2 -41 3272 3184 3652 195 78 15 chr2 159104943 159105705 -91582149 - L1MC4a LINE L1 -218 7590 6877 1573 143 57 32 chr2 159105705 159105984 -91581870 + AluJb SINE Alu 1 286 -26 557 72 12 0 chr2 159105984 159106067 -91581787 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 3652 195 78 15 chr2 159106067 159106230 -91581624 - L1MC4a LINE L1 -930 6878 6606 904 140 140 0 chr2 159106296 159106474 -91581380 - MER2 DNA MER2_type -139 206 4 327 85 0 0 chr2 159106527 159106574 -91581280 + (TC)n Simple_repeat Simple_repeat 1 47 0 228 35 0 0 chr2 159106574 159106603 -91581251 + (TG)n Simple_repeat Simple_repeat 2 30 0 1968 230 51 24 chr2 159106615 159107277 -91580577 - L1MC4a LINE L1 -1203 6605 5926 1192 223 32 46 chr2 159107644 159107756 -91580098 - L1MC4a LINE L1 -1834 5974 5862 2368 62 3 3 chr2 159107756 159108046 -91579808 + AluSc SINE Alu 1 290 -19 1192 223 32 46 chr2 159108046 159108345 -91579509 - L1MC4a LINE L1 -1946 5862 5569 235 356 44 0 chr2 159108346 159108436 -91579418 - MER5B DNA MER1_type -39 139 46 313 232 50 10 chr2 159108445 159108544 -91579310 - L1MB7 LINE L1 -15 6169 6067 191 211 26 0 chr2 159108549 159108587 -91579267 - MER5B DNA MER1_type -125 53 15 363 305 131 77 chr2 159108922 159109520 -91578334 - L2 LINE L2 -204 3068 2448 * 1633 266 105 11 chr2 159109512 159110054 -91577800 + L2 LINE L2 538 1130 -2184 2450 235 83 12 chr2 159110511 159111403 -91576451 - L1ME2 LINE L1 -9 6155 5203 580 187 7 184 chr2 159111414 159111549 -91576305 + L1MC4 LINE L1 7734 7840 -202 248 104 0 0 chr2 159111549 159111597 -91576257 - LTR66 LTR ERVL -169 441 394 580 187 7 184 chr2 159111597 159111724 -91576130 + L1MC4 LINE L1 7840 7988 -54 4863 181 41 7 chr2 159161735 159162743 -91525111 + L1MA7 LINE L1 3502 4543 -1603 297 253 195 0 chr2 159162733 159162820 -91525034 + L1 LINE L1 2587 2690 -3456 * 337 169 217 0 chr2 159164136 159164219 -91523635 + MER90 LTR ERV1 503 603 -11 5232 172 25 15 chr2 159166690 159167734 -91520120 + L1MA7 LINE L1 5227 6280 -11 235 217 65 0 chr2 159168052 159168144 -91519710 + (TA)n Simple_repeat Simple_repeat 1 98 0 284 313 18 9 chr2 159169221 159169333 -91518521 + Tigger1 DNA MER2_type 1040 1152 -1266 762 329 23 26 chr2 159169887 159170234 -91517620 - MARNA DNA Mariner -181 405 60 43 56 0 0 chr2 159172059 159172130 -91515724 + AT_rich Low_complexity Low_complexity 1 71 0 5309 20 3 0 chr2 159173359 159174233 -91513621 + L1P1 LINE L1 4750 5625 -530 189 0 0 0 chr2 159174565 159174586 -91513268 + (T)n Simple_repeat Simple_repeat 1 21 0 226 383 21 0 chr2 159174699 159174793 -91513061 + MIR SINE MIR 4 99 -163 496 170 0 0 chr2 159174793 159174887 -91512967 + MLT2B1 LTR ERVL 1 94 -426 3785 194 101 21 chr2 159174892 159175713 -91512141 + ERVL LTR ERVL 388 1274 -4490 7014 149 16 22 chr2 159178380 159179421 -91508433 + Tigger1 DNA MER2_type 501 1535 -883 2224 99 20 0 chr2 159179421 159179715 -91508139 + AluSq SINE Alu 1 300 -13 7014 149 16 22 chr2 159179715 159179904 -91507950 + Tigger1 DNA MER2_type 1535 1724 -694 375 314 0 0 chr2 159179904 159180057 -91507797 + G-rich Low_complexity Low_complexity 1 153 0 399 199 0 43 chr2 159180069 159180255 -91507599 + G-rich Low_complexity Low_complexity 3 180 0 267 293 12 0 chr2 159180268 159180350 -91507504 + G-rich Low_complexity Low_complexity 2 84 0 189 269 39 0 chr2 159181916 159181968 -91505886 - L2 LINE L2 0 3272 3219 255 204 255 20 chr2 159182145 159182243 -91505611 + MIR SINE MIR 113 233 -29 722 288 35 31 chr2 159182277 159182533 -91505321 + MIR SINE MIR 6 262 0 2213 33 7 4 chr2 159182709 159182980 -91504874 - L1PA4 LINE L1 -3 6152 5881 23 33 0 0 chr2 159183410 159183440 -91504414 + AT_rich Low_complexity Low_complexity 1 30 0 243 204 0 0 chr2 159183779 159183823 -91504031 + MIR3 SINE MIR 154 197 -11 2098 128 10 0 chr2 159184832 159185138 -91502716 + AluSx SINE Alu 1 309 -3 331 296 77 61 chr2 159185494 159185690 -91502164 + MIR SINE MIR 20 218 -44 315 287 17 9 chr2 159186255 159186370 -91501484 + L1ME4a LINE L1 5525 5640 -481 286 268 118 0 chr2 159186567 159186694 -91501160 + L1ME4a LINE L1 5955 6096 -25 24 32 0 0 chr2 159187658 159187689 -91500165 + AT_rich Low_complexity Low_complexity 1 31 0 334 287 134 43 chr2 159187698 159187907 -91499947 - HAL1 LINE L1 -10 2497 2270 1532 243 114 2 chr2 159188066 159188532 -91499322 - L1ME1 LINE L1 -144 6302 5785 2789 219 45 24 chr2 159188534 159189334 -91498520 - L1ME1 LINE L1 -816 5610 4794 725 192 15 0 chr2 159189339 159189469 -91498385 + MER2 DNA MER2_type 5 136 -209 1697 151 46 14 chr2 159189488 159189833 -91498021 - L1MA4A LINE L1 -8 7357 7002 3788 134 31 9 chr2 159189975 159190542 -91497312 - L1MA4A LINE L1 -425 6940 6387 198 0 0 0 chr2 159190542 159190564 -91497290 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3788 134 31 9 chr2 159190564 159191138 -91496716 - L1MA4A LINE L1 -978 6387 5785 11517 201 31 39 chr2 159191569 159197529 -91490325 - L1MA4A LINE L1 -1381 5827 1 608 199 144 30 chr2 159197543 159197744 -91490110 + MER2 DNA MER2_type 122 345 0 1970 257 36 16 chr2 159197800 159198486 -91489368 - L1ME1 LINE L1 -2211 4215 3516 2486 228 42 42 chr2 159198536 159199361 -91488493 - L1ME1 LINE L1 -3318 3108 2310 833 144 0 43 chr2 159199401 159199540 -91488314 + FLAM_C SINE Alu 1 133 -10 1734 167 0 4 chr2 159199605 159199869 -91487985 - AluJo SINE Alu -26 286 24 308 263 123 0 chr2 159199871 159199985 -91487869 - L1ME1 LINE L1 -4586 1840 1713 29 0 0 0 chr2 159200003 159200032 -91487822 + AT_rich Low_complexity Low_complexity 1 29 0 1419 236 56 90 chr2 159200053 159200833 -91487021 - L1ME1 LINE L1 -4865 1561 808 1217 252 142 17 chr2 159200997 159201654 -91486200 + L1MEc LINE L1 2037 2741 -3474 445 248 79 50 chr2 159201648 159201850 -91486004 + L1ME2 LINE L1 5937 6144 -20 * 782 275 52 9 chr2 159202127 159202473 -91485381 + L1MEc LINE L1 1627 1987 -4409 603 241 112 47 chr2 159202474 159202895 -91484959 + L1MEc LINE L1 1991 2467 -3890 396 256 33 0 chr2 159202885 159203006 -91484848 + L1MEc LINE L1 2356 2480 -3735 * 1640 278 20 19 chr2 159202997 159203694 -91484160 + L1MEc LINE L1 2433 3130 -3085 740 226 149 15 chr2 159203697 159203892 -91483962 + MER58A DNA MER1_type 4 224 0 420 293 72 8 chr2 159203906 159204169 -91483685 + L1MEc LINE L1 3139 3418 -2797 21 57 0 0 chr2 159204799 159204834 -91483020 + AT_rich Low_complexity Low_complexity 1 35 0 1150 112 17 0 chr2 159204834 159205012 -91482842 - L1MA5 LINE L1 -5 6295 6115 25 31 0 0 chr2 159205298 159205330 -91482524 + AT_rich Low_complexity Low_complexity 1 32 0 7088 114 24 8 chr2 159206448 159208113 -91479741 + L1MA1 LINE L1 4605 6298 -4 21 0 0 0 chr2 159208119 159208140 -91479714 + AT_rich Low_complexity Low_complexity 1 21 0 661 213 52 6 chr2 159209054 159209228 -91478626 - MER53 DNA DNA 0 189 8 905 238 35 64 chr2 159209263 159209545 -91478309 + L2 LINE L2 2218 2491 -823 1793 156 10 14 chr2 159210199 159210488 -91477366 - AluJo SINE Alu -24 288 1 314 294 157 77 chr2 159212779 159213249 -91474605 - L1M2 LINE L1 -5768 1081 574 411 21 0 0 chr2 159213803 159213851 -91474003 + (CA)n Simple_repeat Simple_repeat 2 49 0 234 0 0 0 chr2 159214814 159214840 -91473014 + (A)n Simple_repeat Simple_repeat 1 26 0 2550 53 0 0 chr2 159214840 159215141 -91472713 + AluY SINE Alu 1 301 -10 1444 186 25 6 chr2 159215220 159215537 -91472317 + MER33 DNA MER1_type 2 324 0 2834 7 0 0 chr2 159217077 159217383 -91470471 - AluYa5 SINE Alu -5 306 1 4460 140 3 7 chr2 159217490 159218213 -91469641 - L1PB4 LINE L1 -2 6154 5435 1204 173 102 7 chr2 159218585 159218880 -91468974 + MER33 DNA MER1_type 1 323 -1 1968 111 53 58 chr2 159218948 159219078 -91468776 - THE1C LTR MaLR 0 375 246 2080 125 0 3 chr2 159219078 159219374 -91468480 + AluSg SINE Alu 1 295 -15 1968 111 53 58 chr2 159219374 159219620 -91468234 - THE1C LTR MaLR -129 246 1 636 180 14 7 chr2 159219971 159220110 -91467744 - Charlie1 DNA MER1_type 0 2761 2622 * 1112 227 17 13 chr2 159220096 159220334 -91467520 - Charlie1 DNA MER1_type -2522 239 1 673 314 102 22 chr2 159220340 159220741 -91467113 + L2 LINE L2 2154 2586 -728 855 168 21 0 chr2 159220747 159220890 -91466964 - AluJb SINE Alu -35 277 132 426 307 43 0 chr2 159221027 159221167 -91466687 + MIR SINE MIR 100 245 -17 416 175 19 0 chr2 159221246 159221349 -91466505 + L1MA4A LINE L1 6198 6302 -1 1512 113 0 0 chr2 159222089 159222293 -91465561 + AluSx SINE Alu 1 204 -108 340 141 12 12 chr2 159222841 159222926 -91464928 + (TGAA)n Simple_repeat Simple_repeat 4 88 0 291 295 55 44 chr2 159223178 159223361 -91464493 + MLT1J LTR MaLR 327 511 0 349 259 65 0 chr2 159223757 159223865 -91463989 + MER103 DNA DNA 49 163 -3 2309 87 0 0 chr2 159223898 159224185 -91463669 - AluSg SINE Alu -21 289 3 853 146 2 13 chr2 159224490 159224646 -91463208 + L1ME3 LINE L1 6021 6170 0 557 271 195 29 chr2 159224875 159225085 -91462769 - MIR SINE MIR -13 249 5 188 366 43 0 chr2 159225175 159225268 -91462586 + L2 LINE L2 2569 2665 -649 222 307 49 55 chr2 159225285 159225448 -91462406 + L2 LINE L2 3147 3308 -5 404 39 0 0 chr2 159225591 159225643 -91462211 - MADE1 DNA Mariner 0 80 29 275 221 47 47 chr2 159225792 159225878 -91461976 + L2 LINE L2 3186 3271 -1 2470 53 3 3 chr2 159227013 159227314 -91460540 + AluY SINE Alu 1 301 -10 768 272 60 13 chr2 159227776 159228008 -91459846 + MLT1K LTR MaLR 344 586 -2 4837 34 0 0 chr2 159228325 159228893 -91458961 - L1PA5 LINE L1 -2 6152 5585 4446 134 11 11 chr2 159229006 159229709 -91458145 - MER44D DNA MER2_type -2 703 1 21 0 0 0 chr2 159230340 159230361 -91457493 + AT_rich Low_complexity Low_complexity 1 21 0 2349 96 0 6 chr2 159230497 159230811 -91457043 + AluSx SINE Alu 1 312 0 1912 263 101 40 chr2 159231087 159232257 -91455597 + HAL1 LINE L1 114 1388 -1119 582 194 123 29 chr2 159232776 159232946 -91454908 + HAL1 LINE L1 1397 1582 -925 1191 254 44 86 chr2 159232981 159233259 -91454595 + HAL1 LINE L1 1521 1809 -698 1941 152 14 0 chr2 159233259 159233548 -91454306 + AluSx SINE Alu 1 293 -19 1191 254 44 86 chr2 159233548 159234058 -91453796 + HAL1 LINE L1 1809 2276 -231 1042 177 0 11 chr2 159234082 159234257 -91453597 + AluJb SINE Alu 2 174 -138 3613 262 84 38 chr2 159234412 159234712 -91453142 + L1ME2 LINE L1 36 321 -5894 2808 39 0 0 chr2 159234712 159235077 -91452777 + L1PA5 LINE L1 5800 6164 0 3613 262 84 38 chr2 159235077 159236171 -91451683 + L1ME2 LINE L1 321 1364 -4851 2126 120 35 37 chr2 159236171 159236547 -91451307 + THE1C LTR MaLR 1 375 0 3613 262 84 38 chr2 159236547 159238074 -91449780 + L1ME2 LINE L1 1364 3072 -3143 631 211 98 31 chr2 159238074 159238268 -91449586 - MER3 DNA MER1_type -1 208 2 3613 262 84 38 chr2 159238268 159238409 -91449445 + L1ME2 LINE L1 3072 3205 -3010 595 202 0 0 chr2 159238421 159238530 -91449324 + AluSg/x SINE Alu 189 297 -13 3310 217 51 43 chr2 159238563 159240246 -91447608 + L1ME2 LINE L1 4537 6224 -9 185 330 170 0 chr2 159240467 159240561 -91447293 - MIR SINE MIR -84 178 69 705 302 59 20 chr2 159240609 159240950 -91446904 - LTR16A LTR ERVL -5 445 92 1630 202 53 37 chr2 159241097 159241527 -91446327 + LTR47B LTR ERVL 7 443 0 695 261 27 36 chr2 159241710 159241932 -91445922 - MIR SINE MIR -30 232 13 198 0 0 0 chr2 159242045 159242067 -91445787 + (A)n Simple_repeat Simple_repeat 1 22 0 560 283 66 20 chr2 159242540 159242692 -91445162 + MIR3 SINE MIR 23 181 -27 405 289 0 10 chr2 159243299 159243403 -91444451 - MIR SINE MIR -61 147 45 219 114 0 0 chr2 159243605 159243640 -91444214 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 1827 276 48 20 chr2 159243647 159244533 -91443321 - L2 LINE L2 0 3313 2396 272 260 26 143 chr2 159244533 159244687 -91443167 - L2 LINE L2 -564 2750 2615 206 132 38 19 chr2 159244781 159244834 -91443020 + (TA)n Simple_repeat Simple_repeat 1 54 0 186 118 0 0 chr2 159244834 159244868 -91442986 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 884 128 0 0 chr2 159245009 159245134 -91442720 + AluSp/q SINE Alu 177 301 -12 14240 131 11 20 chr2 159245136 159245630 -91442224 - Tigger1 DNA MER2_type -169 2249 1752 2188 118 0 0 chr2 159245630 159245926 -91441928 + AluSx SINE Alu 1 296 -16 14240 131 11 20 chr2 159245926 159246161 -91441693 - Tigger1 DNA MER2_type -666 1752 1516 2237 94 17 3 chr2 159246161 159246458 -91441396 - AluSq SINE Alu -12 301 1 14240 131 11 20 chr2 159246458 159247997 -91439857 - Tigger1 DNA MER2_type -902 1516 1 2569 150 25 5 chr2 159247997 159248751 -91439103 - L1M2 LINE L1 -645 5646 4876 27 0 0 0 chr2 159248761 159248788 -91439066 + AT_rich Low_complexity Low_complexity 1 27 0 267 31 0 0 chr2 159249533 159249565 -91438289 + (CTA)n Simple_repeat Simple_repeat 3 34 0 286 211 79 0 chr2 159249628 159249704 -91438150 - MIR SINE MIR -50 212 131 874 233 4 79 chr2 159250138 159250378 -91437476 - MER58A DNA MER1_type -2 222 1 336 273 5 93 chr2 159250378 159250586 -91437268 + MIR SINE MIR 59 247 -15 222 118 0 0 chr2 159250732 159250766 -91437088 + (CA)n Simple_repeat Simple_repeat 1 34 0 423 121 71 193 chr2 159251273 159251373 -91436481 + MER63 DNA MER1_type 2 113 -949 1159 123 91 50 chr2 159251373 159251495 -91436359 + MER30 DNA MER1_type 3 140 -90 2198 91 0 14 chr2 159251495 159251801 -91436053 + AluSc SINE Alu 1 302 0 1159 123 91 50 chr2 159251801 159251896 -91435958 + MER30 DNA MER1_type 140 230 0 423 121 71 193 chr2 159251896 159251935 -91435919 + MER63 DNA MER1_type 113 750 -312 330 26 0 0 chr2 159252230 159252269 -91435585 + (CA)n Simple_repeat Simple_repeat 1 39 0 356 302 10 0 chr2 159252388 159252484 -91435370 + MER5A DNA MER1_type 10 106 -83 220 343 60 66 chr2 159252782 159252859 -91434995 + L2 LINE L2 3060 3136 -136 1838 189 106 38 chr2 159252859 159253330 -91434524 + MLT1D LTR MaLR 1 503 -2 220 343 60 66 chr2 159253330 159253418 -91434436 + L2 LINE L2 3136 3224 -48 257 286 65 0 chr2 159253509 159253586 -91434268 + L2 LINE L2 2730 2811 -503 441 252 92 0 chr2 159253827 159253946 -91433908 + L2 LINE L2 3179 3308 -5 659 249 35 12 chr2 159254276 159254445 -91433409 - MER63A DNA MER1_type -36 174 2 23 33 0 0 chr2 159255463 159255493 -91432361 + AT_rich Low_complexity Low_complexity 1 30 0 11370 215 33 27 chr2 159255539 159261319 -91426535 + L1MA4A LINE L1 21 5859 -1349 31602 103 12 56 chr2 159261332 159267767 -91420087 + L1PA7 LINE L1 9 6152 -2 3457 178 19 6 chr2 159267762 159268864 -91418990 + L1MA4A LINE L1 5845 6956 -409 * 576 242 69 35 chr2 159268864 159269182 -91418672 - L1MEc LINE L1 -2726 3489 3161 718 125 29 0 chr2 159269182 159269286 -91418568 - AluSq/x SINE Alu -206 107 1 3522 249 90 62 chr2 159269290 159269369 -91418485 - L1MEc LINE L1 -3214 3001 2926 2070 182 57 7 chr2 159269369 159269775 -91418079 - MSTB LTR MaLR 0 426 1 3522 249 90 62 chr2 159269775 159271172 -91416682 - L1MEc LINE L1 -3289 2926 1569 2033 117 6 49 chr2 159271172 159271498 -91416356 - AluSp SINE Alu -1 312 1 3522 249 90 62 chr2 159271498 159272988 -91414866 - L1MEc LINE L1 -4646 1569 4 1378 197 79 104 chr2 159273030 159273400 -91414454 - MLT1D LTR MaLR 0 505 127 2246 85 3 0 chr2 159273400 159273683 -91414171 + AluSp SINE Alu 1 284 -29 211 0 57 29 chr2 159273688 159273723 -91414131 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1378 197 79 104 chr2 159273723 159273864 -91413990 - MLT1D LTR MaLR -382 123 1 2428 100 0 0 chr2 159275381 159275691 -91412163 + AluSg SINE Alu 1 310 0 828 257 6 0 chr2 159275739 159275922 -91411932 + Charlie8 DNA MER1_type 92 275 -2142 456 199 81 81 chr2 159276345 159276506 -91411348 + MIR SINE MIR 100 260 -2 2577 39 3 3 chr2 159277191 159277497 -91410357 - AluY SINE Alu -5 306 1 714 240 5 60 chr2 159278269 159278469 -91409385 - MER5A DNA MER1_type 0 189 1 2335 96 3 16 chr2 159278630 159278943 -91408911 + AluSq SINE Alu 4 312 -1 1928 259 115 58 chr2 159278947 159280244 -91407610 + L1MEc LINE L1 450 1820 -4576 425 332 118 14 chr2 159281030 159281250 -91406604 + MIR SINE MIR 18 260 -2 2062 135 0 0 chr2 159281479 159281785 -91406069 + AluSx SINE Alu 1 306 0 2454 158 15 17 chr2 159281794 159282261 -91405593 + L1MB2 LINE L1 5705 6170 -1 1476 164 61 0 chr2 159282264 159282593 -91405261 + L1MB4 LINE L1 5832 6180 0 288 351 88 29 chr2 159284234 159284405 -91403449 - MIR3 SINE MIR -8 200 20 239 254 123 62 chr2 159284451 159284581 -91403273 + MER5B DNA MER1_type 30 167 -11 204 0 26 53 chr2 159284720 159284758 -91403096 + (TA)n Simple_repeat Simple_repeat 1 37 0 659 281 127 34 chr2 159284760 159285145 -91402709 + Charlie7 DNA MER1_type 114 534 -2078 544 217 55 77 chr2 159285284 159285519 -91402335 + HAL1 LINE L1 796 1025 -1482 1720 188 7 7 chr2 159285544 159285853 -91402001 + AluJb SINE Alu 1 309 -3 1027 218 13 39 chr2 159286002 159286236 -91401618 - MIR SINE MIR -33 229 2 418 191 0 29 chr2 159286237 159286342 -91401512 + HAL1 LINE L1 1154 1255 -1252 526 234 169 43 chr2 159286354 159286679 -91401175 + HAL1 LINE L1 1427 1792 -715 394 221 111 22 chr2 159286689 159286870 -91400984 + HAL1 LINE L1 1980 2176 -331 466 246 8 42 chr2 159286878 159286996 -91400858 + L2 LINE L2 3200 3313 0 7110 48 10 3 chr2 159287198 159288943 -91398911 + L1PA7 LINE L1 4400 6154 0 231 274 24 48 chr2 159288945 159289029 -91398825 + HAL1 LINE L1 2377 2458 -49 629 329 77 8 chr2 159289443 159289677 -91398177 + MIR SINE MIR 5 254 -8 1068 169 140 0 chr2 159290082 159290289 -91397565 - MER8 DNA MER2_type 0 239 4 992 173 19 0 chr2 159290994 159291156 -91396698 + AluJb SINE Alu 135 299 -13 2281 105 32 32 chr2 159291189 159291559 -91396295 + THE1C LTR MaLR 6 375 0 870 244 162 0 chr2 159291567 159291895 -91395959 - LTR50 LTR ERVL -192 603 223 440 254 35 29 chr2 159292067 159292240 -91395614 + L1MB3 LINE L1 5466 5639 -531 693 222 91 21 chr2 159292255 159292498 -91395356 + L1ME3A LINE L1 5909 6168 -2 2340 152 101 12 chr2 159292504 159292998 -91394856 + L1MB3 LINE L1 5626 6163 -20 21 0 0 0 chr2 159297026 159297047 -91390807 + AT_rich Low_complexity Low_complexity 1 21 0 2054 135 3 3 chr2 159297050 159297347 -91390507 + AluSx SINE Alu 1 297 -15 2195 107 3 0 chr2 159298501 159298800 -91389054 + AluSc SINE Alu 10 309 0 278 349 0 46 chr2 159300509 159300661 -91387193 + L2 LINE L2 3159 3303 -10 1098 238 35 50 chr2 159300669 159301009 -91386845 - MER46C DNA MER2_type -3 335 1 270 335 71 24 chr2 159301045 159301215 -91386639 - MIR3 SINE MIR -24 184 7 681 197 58 24 chr2 159301587 159301795 -91386059 - MER113 DNA MER1_type? -306 215 1 21 0 0 0 chr2 159302228 159302249 -91385605 + AT_rich Low_complexity Low_complexity 1 21 0 381 204 142 26 chr2 159303388 159303501 -91384353 - MIR SINE MIR -21 241 116 499 245 28 0 chr2 159303785 159303891 -91383963 + MER5A DNA MER1_type 81 189 0 420 221 39 94 chr2 159304359 159304540 -91383314 + L1ME LINE L1 5512 5682 -439 3299 244 54 52 chr2 159306817 159308063 -91379791 + L1M2b LINE L1 1052 2272 -4937 7972 143 152 13 chr2 159308069 159309718 -91378136 + L1PBa LINE L1 1 1878 -4985 7482 221 7 10 chr2 159309718 159310393 -91377461 + L1PBa LINE L1 2481 3157 -3705 2298 100 0 0 chr2 159310393 159310684 -91377170 + AluSg SINE Alu 1 291 -19 7482 221 7 10 chr2 159310684 159312193 -91375661 + L1PBa LINE L1 3157 4644 -2218 1430 183 25 6 chr2 159313607 159313924 -91373930 - MER33 DNA MER1_type 0 324 2 2768 7 0 0 chr2 159314003 159314305 -91373549 - AluYa5 SINE Alu -9 302 1 4429 140 3 7 chr2 159314412 159315135 -91372719 - L1PB4 LINE L1 -2 6154 5435 1169 173 102 7 chr2 159315507 159315802 -91372052 + MER33 DNA MER1_type 1 323 -1 2136 106 40 43 chr2 159315870 159315999 -91371855 - THE1C LTR MaLR 0 375 247 2058 132 0 3 chr2 159315999 159316295 -91371559 + AluSg SINE Alu 1 295 -15 2136 106 40 43 chr2 159316295 159316541 -91371313 - THE1C LTR MaLR -128 247 1 596 170 15 7 chr2 159316896 159317031 -91370823 - Charlie1 DNA MER1_type -4 2757 2622 * 1034 227 17 13 chr2 159317017 159317255 -91370599 - Charlie1 DNA MER1_type -2522 239 1 682 314 102 22 chr2 159317261 159317662 -91370192 + L2 LINE L2 2154 2586 -728 742 164 43 0 chr2 159317668 159317808 -91370046 - AluJb SINE Alu -35 277 132 426 307 43 0 chr2 159317945 159318085 -91369769 + MIR SINE MIR 100 245 -17 405 175 19 0 chr2 159318164 159318267 -91369587 + L1MA4A LINE L1 6198 6302 -1 424 320 117 16 chr2 159321587 159321843 -91366011 - L2 LINE L2 -4 3309 3028 525 16 0 0 chr2 159321886 159321948 -91365906 + (TG)n Simple_repeat Simple_repeat 2 63 0 1010 306 131 19 chr2 159321948 159322627 -91365227 - L2 LINE L2 -375 2939 2185 837 290 48 8 chr2 159324051 159324299 -91363555 + MIR SINE MIR 3 260 -2 206 140 88 0 chr2 159325498 159325555 -91362299 + (TTAAA)n Simple_repeat Simple_repeat 4 65 0 397 296 80 30 chr2 159325642 159325856 -91361998 - MIR SINE MIR -28 234 10 198 339 73 28 chr2 159325874 159325983 -91361871 - MER5B DNA MER1_type -23 155 42 4175 24 6 6 chr2 159326730 159327238 -91360616 + L1PA3 LINE L1 5648 6155 0 682 281 171 41 chr2 159327403 159327841 -91360013 + MLT1L LTR MaLR 121 615 0 395 37 0 19 chr2 159328165 159328219 -91359635 + (TC)n Simple_repeat Simple_repeat 1 53 0 395 318 0 19 chr2 159328372 159328526 -91359328 - MER117 DNA MER1_type -44 153 3 210 254 18 0 chr2 159328608 159328663 -91359191 - MER5A DNA MER1_type -81 108 53 676 262 70 42 chr2 159328667 159329062 -91358792 + Charlie8 DNA MER1_type 4 412 -2005 420 276 256 18 chr2 159329901 159330346 -91357508 - L1MC4a LINE L1 -1905 5903 5353 372 343 56 19 chr2 159330349 159330617 -91357237 - L1MC4a LINE L1 -826 5320 5043 638 163 16 47 chr2 159330861 159330990 -91356864 - FLAM_C SINE Alu -6 127 3 201 278 0 0 chr2 159331071 159331125 -91356729 + (TAA)n Simple_repeat Simple_repeat 1 54 0 336 291 200 24 chr2 159331130 159331340 -91356514 - MIR SINE MIR -1 261 15 21 36 0 0 chr2 159331871 159331899 -91355955 + AT_rich Low_complexity Low_complexity 1 28 0 369 282 109 70 chr2 159331900 159332457 -91355397 + L1MC4a LINE L1 5352 5930 -1878 22 0 0 0 chr2 159333102 159333124 -91354730 + AT_rich Low_complexity Low_complexity 1 22 0 309 352 38 19 chr2 159334468 159334627 -91353227 + MIR3 SINE MIR 23 184 -24 335 319 72 0 chr2 159334673 159334811 -91353043 + MIR SINE MIR 75 222 -40 942 225 6 0 chr2 159334827 159335005 -91352849 - MSTD LTR MaLR 0 396 218 2547 14 0 0 chr2 159335007 159335286 -91352568 + AluYb8 SINE Alu 1 279 -39 204 40 0 0 chr2 159335428 159335453 -91352401 + (A)n Simple_repeat Simple_repeat 1 25 0 769 205 19 6 chr2 159335472 159335628 -91352226 - MSTD LTR MaLR -270 158 1 180 200 0 0 chr2 159335628 159335673 -91352181 + (ATG)n Simple_repeat Simple_repeat 2 46 0 2911 90 12 88 chr2 159336022 159336512 -91351342 + MLT2A2 LTR ERVL 1 453 0 186 362 75 0 chr2 159338231 159338325 -91349529 + L2 LINE L2 3139 3239 -33 186 43 0 0 chr2 159338356 159338379 -91349475 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 233 306 97 16 chr2 159338435 159338559 -91349295 + MIR SINE MIR 109 242 -20 492 276 167 6 chr2 159340332 159340488 -91347366 - MER5A DNA MER1_type 0 189 9 1180 216 9 0 chr2 159340538 159340760 -91347094 - MER58A DNA MER1_type 0 224 1 323 287 27 103 chr2 159341257 159341599 -91346255 - L2 LINE L2 0 3272 2927 6317 56 4 18 chr2 159341599 159341732 -91346122 + L1PA8 LINE L1 5358 5491 -681 2188 84 7 26 chr2 159341732 159342040 -91345814 + AluY SINE Alu 1 302 -9 6317 56 4 18 chr2 159342040 159342733 -91345121 + L1PA8 LINE L1 5491 6172 0 323 287 27 103 chr2 159342733 159342867 -91344987 - L2 LINE L2 -345 2927 2784 1019 296 65 53 chr2 159342988 159343606 -91344248 - L2 LINE L2 -556 2758 2134 342 247 37 0 chr2 159344407 159344488 -91343366 - MIR SINE MIR -113 149 66 501 304 56 0 chr2 159344893 159345054 -91342800 - L2 LINE L2 -1 3271 3102 3742 167 18 4 chr2 159345974 159347226 -91340628 + L1PB1 LINE L1 4525 5793 -358 249 113 14 28 chr2 159347239 159347310 -91340544 + (TA)n Simple_repeat Simple_repeat 1 70 0 420 122 14 0 chr2 159347310 159347384 -91340470 + L1PB1 LINE L1 5782 5856 -295 * 4174 172 28 20 chr2 159347383 159348525 -91339329 + L1PA12 LINE L1 1974 3103 -3745 912 206 94 49 chr2 159348531 159348754 -91339100 + MER8 DNA MER2_type 7 239 0 7544 189 78 8 chr2 159348754 159350464 -91337390 + L1 LINE L1 3102 4932 -1916 2005 155 22 27 chr2 159350466 159350867 -91336987 + L1MA4A LINE L1 5894 6292 -11 1602 152 100 7 chr2 159352444 159352754 -91335100 + MER44D DNA MER2_type 1 609 0 301 146 0 0 chr2 159352844 159352892 -91334962 - MLT1F1 LTR MaLR -518 49 2 994 225 163 56 chr2 159352905 159353345 -91334509 + MLT1F LTR MaLR 53 542 0 397 268 34 50 chr2 159353477 159353656 -91334198 + L1MC4 LINE L1 7795 7970 -72 1495 184 56 11 chr2 159353719 159353986 -91333868 + AluJo SINE Alu 6 284 -28 2039 82 0 82 chr2 159354470 159354786 -91333068 - AluSx SINE Alu -22 290 1 217 308 77 22 chr2 159354938 159355029 -91332825 - MIR SINE MIR -142 120 25 443 211 140 70 chr2 159355677 159355848 -91332006 + L1ME2 LINE L1 5972 6154 -10 248 238 59 20 chr2 159356005 159356106 -91331748 + L1MC4 LINE L1 7923 8027 -15 307 302 12 55 chr2 159356837 159356985 -91330869 + MIR3 SINE MIR 20 163 -45 180 240 17 166 chr2 159357170 159357300 -91330554 - L2 LINE L2 -183 3089 2990 2283 99 0 6 chr2 159357300 159357612 -91330242 - AluSq SINE Alu -3 310 1 180 240 17 166 chr2 159357612 159357656 -91330198 - L2 LINE L2 -282 2990 2941 296 271 116 23 chr2 159357932 159358061 -91329793 - MIR SINE MIR -53 209 69 253 371 0 21 chr2 159358223 159358320 -91329534 - MIR SINE MIR -167 95 1 21 0 0 0 chr2 159358759 159358780 -91329074 + AT_rich Low_complexity Low_complexity 1 21 0 362 325 45 13 chr2 159359046 159359203 -91328651 + MIR SINE MIR 101 262 0 2415 87 3 0 chr2 159364627 159364939 -91322915 - AluSp SINE Alu 0 313 1 752 162 7 29 chr2 159366162 159366298 -91321556 - FLAM_C SINE Alu 0 133 1 620 263 162 7 chr2 159367132 159367410 -91320444 - MER113 DNA MER1_type? -41 480 160 943 208 33 57 chr2 159367556 159367888 -91319966 + MER33 DNA MER1_type 1 324 0 250 246 0 0 chr2 159369094 159369151 -91318703 + (TTCA)n Simple_repeat Simple_repeat 2 58 0 1044 235 13 4 chr2 159371401 159371635 -91316219 - MER46A DNA MER2_type 0 236 1 221 333 43 11 chr2 159376056 159376149 -91311705 + L2 LINE L2 2349 2444 -870 197 260 65 0 chr2 159376151 159376228 -91311626 + L2 LINE L2 2739 2820 -494 291 244 44 0 chr2 159576973 159577063 -91110791 - L1ME4a LINE L1 -82 6039 5946 266 200 144 33 chr2 159577215 159577281 -91110573 - L2 LINE L2 0 3272 3192 378 61 0 0 chr2 159577281 159577330 -91110524 + (CA)n Simple_repeat Simple_repeat 2 50 0 266 200 144 33 chr2 159577330 159577353 -91110501 - L2 LINE L2 -80 3192 3173 181 325 0 0 chr2 159577415 159577455 -91110399 - L2 LINE L2 -247 3066 3027 2815 7 0 0 chr2 159577459 159577760 -91110094 + AluYa5 SINE Alu 1 301 -10 2170 110 36 0 chr2 159577881 159578182 -91109672 - AluSx SINE Alu 0 312 1 291 54 0 0 chr2 159578200 159578237 -91109617 + (T)n Simple_repeat Simple_repeat 1 37 0 2103 120 30 0 chr2 159578367 159578668 -91109186 - AluSx SINE Alu -2 310 1 959 172 0 0 chr2 159578671 159578822 -91109032 + AluJb SINE Alu 105 255 -57 777 200 30 0 chr2 159578831 159578966 -91108888 + MLT1A1 LTR MaLR 227 365 0 2076 137 0 7 chr2 159579195 159579494 -91108360 - AluSx SINE Alu -15 297 1 1231 159 10 5 chr2 159581473 159581674 -91106180 + AluJb SINE Alu 1 202 -110 604 190 83 0 chr2 159581873 159581994 -91105860 + MER99 DNA DNA 698 828 0 323 156 16 31 chr2 159582729 159582793 -91105061 + MER116 DNA Mariner 1 63 -17 1913 150 7 0 chr2 159582795 159583081 -91104773 + AluJo SINE Alu 1 288 -24 2033 129 27 10 chr2 159583363 159583658 -91104196 - AluSx SINE Alu -12 300 1 2096 121 3 3 chr2 159585474 159585780 -91102074 + AluSx SINE Alu 4 309 -3 322 286 158 0 chr2 159586416 159586549 -91101305 + MIR SINE MIR 11 164 -98 220 318 95 0 chr2 159586560 159586686 -91101168 - MIR SINE MIR -1 261 124 1974 122 3 38 chr2 159587844 159588164 -91099690 - AluSx SINE Alu -3 309 1 814 168 8 15 chr2 159588165 159588296 -91099558 - AluJo SINE Alu -178 134 5 4227 95 16 0 chr2 159588412 159588957 -91098897 + MER41A LTR ERV1 1 554 0 292 164 16 33 chr2 159589163 159589224 -91098630 - MER113 DNA MER1_type? -1 520 461 513 172 45 76 chr2 159589351 159589508 -91098346 + MER5B DNA MER1_type 24 175 -3 331 219 114 38 chr2 159589608 159589713 -91098141 - MER81 DNA DNA -1 113 1 243 212 82 59 chr2 159589909 159589994 -91097860 + MER103 DNA DNA 70 156 -10 309 271 110 51 chr2 159590246 159590364 -91097490 - MER5A DNA MER1_type -56 133 9 229 231 0 0 chr2 159590645 159590697 -91097157 + L2 LINE L2 3262 3313 0 240 111 89 22 chr2 159590846 159590891 -91096963 - Alu SINE Alu -203 99 52 424 148 0 157 chr2 159590897 159590947 -91096907 - MLT1A1 LTR MaLR -274 91 65 2356 103 0 3 chr2 159590947 159591258 -91096596 - AluSx SINE Alu -2 310 1 424 148 0 157 chr2 159591258 159591315 -91096539 - MLT1A1 LTR MaLR -300 65 1 364 290 77 103 chr2 159591333 159591830 -91096024 + MLT1K LTR MaLR 99 582 -6 242 388 23 47 chr2 159591830 159592044 -91095810 - L2 LINE L2 -232 3040 2832 1627 174 30 127 chr2 159592163 159592429 -91095425 - MLT1B LTR MaLR 0 390 180 2569 53 7 0 chr2 159592429 159592732 -91095122 - AluY SINE Alu -6 305 1 1627 174 30 127 chr2 159592732 159592897 -91094957 - MLT1B LTR MaLR -210 180 1 264 346 55 28 chr2 159592904 159593193 -91094661 + L1ME3A LINE L1 5483 5779 -383 1692 188 0 10 chr2 159593201 159593494 -91094360 - AluJo SINE Alu -21 291 2 313 246 15 90 chr2 159593495 159593629 -91094225 + L1ME3A LINE L1 5765 5888 -282 758 232 88 5 chr2 159593652 159593846 -91094008 - MER63A DNA MER1_type 0 210 1 506 176 52 15 chr2 159593862 159593998 -91093856 - MIR SINE MIR -65 197 57 2121 77 34 24 chr2 159594760 159595057 -91092797 - AluSc SINE Alu -9 300 1 1500 180 21 25 chr2 159595115 159595398 -91092456 - AluJb SINE Alu -19 293 12 21 0 0 0 chr2 159595839 159595860 -91091994 + AT_rich Low_complexity Low_complexity 1 21 0 187 295 29 105 chr2 159596080 159596185 -91091669 - MIR3 SINE MIR -36 172 76 241 296 14 0 chr2 159596295 159596366 -91091488 + L1MC/D LINE L1 5588 5659 -2149 218 81 27 0 chr2 159596369 159596406 -91091448 + (TAGA)n Simple_repeat Simple_repeat 2 39 0 2415 64 3 13 chr2 159596406 159596717 -91091137 + AluSp SINE Alu 2 309 -4 396 0 0 0 chr2 159596717 159596761 -91091093 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 425 172 0 0 chr2 159596785 159596849 -91091005 - Tigger7 DNA MER2_type -22 2465 2402 534 128 12 12 chr2 159597390 159597476 -91090378 + AluS SINE Alu 220 305 -7 240 325 244 30 chr2 159597535 159597739 -91090115 + L3 LINE CR1 289 448 -1129 2183 130 0 0 chr2 159597739 159598039 -91089815 + AluSx SINE Alu 1 300 -12 240 325 244 30 chr2 159598039 159598862 -91088992 + L3 LINE CR1 448 1536 -41 504 0 0 0 chr2 159598921 159598977 -91088877 + (CA)n Simple_repeat Simple_repeat 2 57 0 1988 146 3 7 chr2 159599282 159599590 -91088264 + AluJb SINE Alu 1 307 -5 1757 207 39 8 chr2 159600247 159600609 -91087245 - MLT1A2 LTR MaLR 0 374 2 461 333 69 74 chr2 159600787 159601235 -91086619 + L2 LINE L2 2826 3271 -1 2373 71 3 3 chr2 159601507 159601803 -91086051 + AluY SINE Alu 1 296 -15 2108 112 0 17 chr2 159601819 159602113 -91085741 + AluSc SINE Alu 1 289 -20 1363 161 11 80 chr2 159602199 159602335 -91085519 + AluJb SINE Alu 1 145 -167 360 0 0 0 chr2 159602335 159602375 -91085479 + (TG)n Simple_repeat Simple_repeat 2 41 0 1363 161 11 80 chr2 159602375 159602389 -91085465 + AluJb SINE Alu 145 158 -154 207 0 0 0 chr2 159602389 159602412 -91085442 + (CA)n Simple_repeat Simple_repeat 2 24 0 1363 161 11 80 chr2 159602412 159602546 -91085308 + AluJb SINE Alu 158 266 -46 185 188 0 0 chr2 159603609 159603641 -91084213 - L2 LINE L2 -12 3301 3270 2111 150 3 0 chr2 159603982 159604289 -91083565 + AluJb SINE Alu 1 308 -4 2398 77 7 0 chr2 159604561 159604860 -91082994 - AluSp SINE Alu -12 301 1 186 262 162 113 chr2 159605638 159606046 -91081808 + L2 LINE L2 2825 3252 -20 189 0 0 0 chr2 159606420 159606441 -91081413 + (T)n Simple_repeat Simple_repeat 1 21 0 746 142 30 127 chr2 159607030 159607082 -91080772 - MER3 DNA MER1_type -31 131 76 956 109 0 29 chr2 159607082 159607219 -91080635 + FLAM_C SINE Alu 1 133 0 746 142 30 127 chr2 159607219 159607363 -91080491 - MER3 DNA MER1_type -86 76 1 370 284 174 19 chr2 159607374 159607529 -91080325 + MER5A DNA MER1_type 4 182 -7 523 131 202 0 chr2 159607569 159607653 -91080201 + U6 snRNA snRNA 1 101 -6 6158 98 37 6 chr2 159607693 159608526 -91079328 + L1PA16 LINE L1 4820 5703 -463 1616 186 23 3 chr2 159608526 159608827 -91079027 + AluJo SINE Alu 1 307 -5 6158 98 37 6 chr2 159608827 159609307 -91078547 + L1PA16 LINE L1 5703 6166 0 234 0 0 0 chr2 159609310 159609336 -91078518 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 890 212 26 37 chr2 159609341 159609437 -91078417 - MER5A DNA MER1_type 0 189 94 2195 210 47 13 chr2 159609437 159609889 -91077965 - MLT1C LTR MaLR 0 467 1 890 212 26 37 chr2 159609889 159609981 -91077873 - MER5A DNA MER1_type -95 94 3 312 345 21 7 chr2 159610018 159610160 -91077694 - L3 LINE CR1 -19 1558 1415 284 200 0 0 chr2 159610870 159610920 -91076934 + MLT1L LTR MaLR 152 201 -414 2159 118 0 40 chr2 159611039 159611362 -91076492 - AluSx SINE Alu -2 310 1 24 32 0 0 chr2 159611539 159611570 -91076284 + AT_rich Low_complexity Low_complexity 1 31 0 228 219 0 0 chr2 159611936 159611977 -91075877 + MER5B DNA MER1_type 1 41 -137 2333 109 0 0 chr2 159612046 159612357 -91075497 - AluSx SINE Alu 0 312 2 465 292 15 0 chr2 159612998 159613128 -91074726 + MLT1L LTR MaLR 1 132 -483 226 204 0 0 chr2 159613189 159613233 -91074621 + MIR SINE MIR 82 125 -137 274 302 0 42 chr2 159613259 159613355 -91074499 + MLT1L LTR MaLR 411 502 -113 564 218 0 9 chr2 159613355 159613465 -91074389 + L2 LINE L2 3197 3305 -8 299 219 117 87 chr2 159613868 159614064 -91073790 + MLT1K LTR MaLR 379 580 -8 2320 117 0 0 chr2 159614180 159614489 -91073365 + AluSc SINE Alu 1 309 0 309 26 0 0 chr2 159615439 159615477 -91072377 + (CA)n Simple_repeat Simple_repeat 2 39 0 306 200 10 30 chr2 159615870 159615956 -91071898 + CT-rich Low_complexity Low_complexity 3 88 -12 2114 101 3 7 chr2 159615956 159616242 -91071612 - AluSg SINE Alu -25 285 1 306 200 10 30 chr2 159616242 159616255 -91071599 + CT-rich Low_complexity Low_complexity 88 100 0 658 175 0 0 chr2 159616333 159616430 -91071424 - FRAM SINE Alu -77 99 3 192 77 0 0 chr2 159616506 159616532 -91071322 + (A)n Simple_repeat Simple_repeat 1 26 0 474 33 0 0 chr2 159616551 159616611 -91071243 + (CAAG)n Simple_repeat Simple_repeat 2 61 0 1933 163 17 0 chr2 159616631 159616932 -91070922 + AluJb SINE Alu 1 306 -6 324 254 152 25 chr2 159617079 159617287 -91070567 - MIR SINE MIR -17 245 13 447 175 12 25 chr2 159617558 159617638 -91070216 + MER94 DNA DNA 1 79 -55 382 237 53 46 chr2 159617906 159618037 -91069817 - MER5A DNA MER1_type -1 188 57 213 297 50 40 chr2 159617957 159618058 -91069796 + MER5A DNA MER1_type 63 164 -25 * 403 291 61 56 chr2 159618436 159618632 -91069222 - MIR SINE MIR -30 232 36 184 263 75 25 chr2 159619467 159619547 -91068307 + MIR SINE MIR 64 147 -115 21 36 0 0 chr2 159619648 159619676 -91068178 + AT_rich Low_complexity Low_complexity 1 28 0 237 245 0 0 chr2 159620253 159620306 -91067548 - MIR SINE MIR -92 170 118 709 207 0 0 chr2 159620336 159620452 -91067402 + FLAM_A SINE Alu 4 119 -14 25 31 0 0 chr2 159620452 159620484 -91067370 + AT_rich Low_complexity Low_complexity 1 32 0 1148 254 27 52 chr2 159620736 159621142 -91066712 - L1MC4a LINE L1 -1892 5916 5521 736 181 17 0 chr2 159621250 159621366 -91066488 + FLAM_A SINE Alu 1 118 -15 207 0 0 0 chr2 159623035 159623058 -91064796 + (A)n Simple_repeat Simple_repeat 1 23 0 643 261 47 85 chr2 159624070 159624264 -91063590 + L1MC5 LINE L1 7505 7705 -256 350 42 21 0 chr2 159624264 159624312 -91063542 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 1743 156 0 11 chr2 159624320 159624595 -91063259 - AluSx SINE Alu -38 274 3 643 261 47 85 chr2 159624595 159624813 -91063041 + L1MC5 LINE L1 7712 7910 -51 2429 101 3 0 chr2 159626345 159626653 -91061201 + AluSx SINE Alu 2 310 -2 25 0 0 0 chr2 159626762 159626787 -91061067 + AT_rich Low_complexity Low_complexity 1 25 0 359 276 45 85 chr2 159628073 159628272 -91059582 - Charlie8 DNA MER1_type -2226 191 1 456 239 72 7 chr2 159628322 159628460 -91059394 + MIR SINE MIR 79 225 -37 2165 94 7 14 chr2 159628705 159629002 -91058852 + AluSg SINE Alu 2 296 -14 406 272 93 37 chr2 159629907 159630153 -91057701 - MER112 DNA MER1_type 0 260 1 330 250 67 39 chr2 159631501 159631605 -91056249 - L2 LINE L2 -8 3264 3158 561 246 47 52 chr2 159633487 159633698 -91054156 - MER113 DNA MER1_type? -311 210 1 361 282 210 31 chr2 159633703 159633898 -91053956 + MIR SINE MIR 13 242 -20 252 59 0 0 chr2 159635987 159636021 -91051833 + (CA)n Simple_repeat Simple_repeat 2 35 0 1676 150 3 47 chr2 159636484 159636784 -91051070 - AluJo SINE Alu -4 308 22 341 247 0 0 chr2 159636786 159636867 -91050987 - AluJ/FLAM SINE Alu -240 62 1 423 92 0 0 chr2 159636971 159637036 -91050818 + L1PB4 LINE L1 6092 6156 0 867 144 6 61 chr2 159637067 159637247 -91050607 + L1MB8 LINE L1 6007 6176 -2 2037 125 10 10 chr2 159637258 159637553 -91050301 + AluSx SINE Alu 1 295 -17 227 316 31 10 chr2 159637558 159637656 -91050198 - L1ME4a LINE L1 -73 6048 5949 880 231 0 0 chr2 159637718 159637878 -91049976 + FRAM SINE Alu 2 161 -5 364 314 57 19 chr2 159637914 159638073 -91049781 + MIR3 SINE MIR 41 205 -3 257 265 0 91 chr2 159638125 159638257 -91049597 + L1MC4a LINE L1 5819 5938 -1870 321 25 50 0 chr2 159638394 159638434 -91049420 + tRNA-Gln-CAG tRNA tRNA 1 42 -33 1782 145 60 0 chr2 159638457 159638740 -91049114 - AluJb SINE Alu -7 305 6 188 0 74 0 chr2 159638756 159638783 -91049071 + (TTTTC)n Simple_repeat Simple_repeat 1 29 0 * 225 94 0 0 chr2 159638782 159638814 -91049040 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 2135 141 0 3 chr2 159638814 159639126 -91048728 - AluSx SINE Alu -1 311 1 2270 100 10 0 chr2 159639249 159639549 -91048305 - AluSp SINE Alu -10 303 1 220 345 78 21 chr2 159639573 159639715 -91048139 + L2 LINE L2 2783 2932 -382 358 243 72 18 chr2 159639781 159639892 -91047962 - MIR3 SINE MIR -16 192 76 410 224 197 0 chr2 159640600 159640747 -91047107 - L1ME4a LINE L1 -2 6119 5944 430 272 31 25 chr2 159640861 159641023 -91046831 - L1ME4a LINE L1 -426 5695 5533 24 0 0 0 chr2 159641088 159641112 -91046742 + AT_rich Low_complexity Low_complexity 1 24 0 2318 68 0 0 chr2 159641321 159641625 -91046229 + AluY SINE Alu 1 304 0 24 67 0 0 chr2 159641811 159641856 -91045998 + AT_rich Low_complexity Low_complexity 1 45 0 2365 73 0 0 chr2 159643278 159643564 -91044290 - AluSx SINE Alu -15 297 12 24 32 0 0 chr2 159643670 159643701 -91044153 + AT_rich Low_complexity Low_complexity 1 31 0 49 0 0 0 chr2 159643796 159643845 -91044009 + AT_rich Low_complexity Low_complexity 1 49 0 1339 153 28 23 chr2 159644158 159644374 -91043480 + MER20 DNA MER1_type 3 219 0 342 0 0 0 chr2 159644478 159644516 -91043338 + (CA)n Simple_repeat Simple_repeat 2 39 0 3426 134 88 0 chr2 159644625 159645134 -91042720 - MER41C LTR ERV1 0 554 1 343 314 57 8 chr2 159645303 159645427 -91042427 - L2 LINE L2 0 3272 3143 222 254 16 16 chr2 159645566 159645629 -91042225 - MIR SINE MIR -152 110 48 458 211 140 70 chr2 159646322 159646493 -91041361 + L1ME2 LINE L1 5972 6154 -10 261 238 59 20 chr2 159646650 159646751 -91041103 + L1MC4 LINE L1 7923 8027 -15 293 299 14 57 chr2 159647482 159647630 -91040224 + MIR3 SINE MIR 20 163 -45 192 271 39 93 chr2 159647815 159647944 -91039910 - L2 LINE L2 -183 3089 2968 2307 99 0 6 chr2 159647945 159648257 -91039597 - AluSq SINE Alu -3 310 1 286 271 116 23 chr2 159648577 159648706 -91039148 - MIR SINE MIR -53 209 69 245 371 0 21 chr2 159648868 159648965 -91038889 - MIR SINE MIR -167 95 1 21 0 0 0 chr2 159649404 159649425 -91038429 + AT_rich Low_complexity Low_complexity 1 21 0 353 329 38 13 chr2 159649691 159649849 -91038005 + MIR SINE MIR 101 262 0 2442 87 3 0 chr2 159655276 159655588 -91032266 - AluSp SINE Alu 0 313 1 750 170 15 30 chr2 159656811 159656946 -91030908 - FLAM_C SINE Alu 0 133 1 662 263 162 7 chr2 159657780 159658058 -91029796 - MER113 DNA MER1_type? -41 480 160 1061 208 33 57 chr2 159658204 159658536 -91029318 + MER33 DNA MER1_type 1 324 0 250 246 0 0 chr2 159659746 159659803 -91028051 + (TTCA)n Simple_repeat Simple_repeat 2 58 0 1135 235 13 4 chr2 159662053 159662287 -91025567 - MER46A DNA MER2_type 0 236 1 221 333 43 11 chr2 159666710 159666803 -91021051 + L2 LINE L2 2349 2444 -870 206 234 78 13 chr2 159666805 159666882 -91020972 + L2 LINE L2 2739 2820 -494 333 327 66 83 chr2 159666952 159667301 -91020553 + L2 LINE L2 2926 3268 -4 3098 179 26 4 chr2 159669149 159669681 -91018173 + MER44D DNA MER2_type 7 605 0 392 268 0 0 chr2 159672318 159672400 -91015454 - L2 LINE L2 0 3313 3232 275 195 239 9 chr2 159672427 159672540 -91015314 - MIR SINE MIR -21 241 103 595 200 33 72 chr2 159673590 159673770 -91014084 - MER112 DNA MER1_type -85 175 3 295 298 161 6 chr2 159675483 159675651 -91012203 + MIR SINE MIR 68 261 -1 480 18 0 0 chr2 159676270 159676327 -91011527 + (CA)n Simple_repeat Simple_repeat 2 58 0 1868 158 7 0 chr2 159676834 159677132 -91010722 + AluJo SINE Alu 1 300 -12 1695 173 13 7 chr2 159677162 159677462 -91010392 + AluJb SINE Alu 1 302 -10 315 267 13 13 chr2 159677618 159677693 -91010161 - MER20 DNA MER1_type -144 75 1 326 179 155 12 chr2 159677882 159677966 -91009888 - MER33 DNA MER1_type 0 363 268 * 516 218 145 0 chr2 159677964 159678096 -91009758 - MER33 DNA MER1_type -252 72 1 1337 241 32 123 chr2 159678603 159678675 -91009179 + MER20B DNA MER1_type 106 183 -600 1561 185 141 3 chr2 159678675 159678994 -91008860 + MLT1A1 LTR MaLR 3 365 0 1337 241 32 123 chr2 159678994 159679435 -91008419 + MER20B DNA MER1_type 183 662 -121 2192 119 0 0 chr2 159679435 159679720 -91008134 - AluSx SINE Alu -27 285 1 1337 241 32 123 chr2 159679720 159679784 -91008070 + MER20B DNA MER1_type 662 606 -177 2255 112 3 0 chr2 159679784 159680088 -91007766 - AluSx SINE Alu -7 305 1 1337 241 32 123 chr2 159680088 159680247 -91007607 + MER20B DNA MER1_type 605 777 -6 914 110 0 0 chr2 159681145 159681263 -91006591 + FLAM_C SINE Alu 1 118 -15 34 24 0 0 chr2 159681267 159681308 -91006546 + AT_rich Low_complexity Low_complexity 1 41 0 828 299 153 24 chr2 159681849 159682484 -91005370 + Charlie7 DNA MER1_type 7 723 -1889 234 221 174 27 chr2 159682481 159682630 -91005224 + Charlie7 DNA MER1_type 2442 2612 0 * 230 290 170 0 chr2 159682685 159682785 -91005069 - L2 LINE L2 0 3313 3197 412 299 61 121 chr2 159683251 159683723 -91004131 + L2 LINE L2 2828 3271 -1 21 0 0 0 chr2 159684363 159684384 -91003470 + AT_rich Low_complexity Low_complexity 1 21 0 1074 196 135 24 chr2 159684542 159684919 -91002935 - Charlie1 DNA MER1_type 0 2761 2343 258 304 14 14 chr2 159684917 159684986 -91002868 - Charlie1 DNA MER1_type -2690 71 3 * 212 330 113 10 chr2 159686145 159686242 -91001612 - L3b LINE CR1 -13 1570 1464 180 0 0 0 chr2 159686579 159686599 -91001255 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1931 159 0 13 chr2 159686612 159686926 -91000928 - AluJb SINE Alu -2 310 1 312 70 0 0 chr2 159688706 159688749 -90999105 + (TC)n Simple_repeat Simple_repeat 2 44 0 308 216 102 148 chr2 159688862 159689098 -90998756 + L2 LINE L2 3073 3297 -16 21 0 0 0 chr2 159689673 159689694 -90998160 + AT_rich Low_complexity Low_complexity 1 21 0 1848 169 0 3 chr2 159690590 159690880 -90996974 + AluJo SINE Alu 1 289 -23 265 274 111 34 chr2 159691725 159691842 -90996012 - MER5A DNA MER1_type -26 163 38 31 0 0 0 chr2 159692224 159692255 -90995599 + AT_rich Low_complexity Low_complexity 1 31 0 453 193 99 62 chr2 159692371 159692563 -90995291 - L1MC5 LINE L1 -158 7803 7605 189 0 0 0 chr2 159692584 159692605 -90995249 + (CAA)n Simple_repeat Simple_repeat 1 21 0 180 0 0 0 chr2 159692754 159692774 -90995080 + (CAA)n Simple_repeat Simple_repeat 1 20 0 619 245 52 95 chr2 159692832 159693179 -90994675 + L1MC4a LINE L1 6397 6728 -1080 275 287 25 19 chr2 159693174 159693331 -90994523 + L1MC5 LINE L1 7370 7527 -434 * 270 330 0 0 chr2 159694168 159694271 -90993583 + L1MC1 LINE L1 4745 4847 -1299 404 321 68 42 chr2 159694342 159694794 -90993060 + MLT1J LTR MaLR 1 511 0 419 263 0 72 chr2 159694948 159695100 -90992754 + L2 LINE L2 3173 3313 0 1386 280 75 26 chr2 159695242 159695769 -90992085 + L1MC1 LINE L1 5287 5852 -1956 2277 84 0 19 chr2 159695769 159696079 -90991775 + AluY SINE Alu 2 305 -6 1386 280 75 26 chr2 159696079 159696193 -90991661 + L1MC1 LINE L1 5852 5959 -1849 1403 167 0 50 chr2 159697307 159697594 -90990260 + AluJo SINE Alu 40 313 0 1690 194 0 10 chr2 159697930 159698229 -90989625 - AluJb SINE Alu -16 296 1 2335 154 41 5 chr2 159698285 159698674 -90989180 + L1MC1 LINE L1 5931 6333 0 2222 112 3 10 chr2 159698685 159698997 -90988857 + AluSg SINE Alu 1 310 0 2888 7 0 0 chr2 159699762 159700069 -90987785 + AluYa5 SINE Alu 1 307 -4 1752 94 11 60 chr2 159700214 159700481 -90987373 + AluSq SINE Alu 49 302 -11 244 191 43 0 chr2 159700880 159700927 -90986927 + Charlie3 DNA MER1_type 2635 2683 -27 319 289 96 19 chr2 159701453 159701557 -90986297 + L2 LINE L2 3201 3312 -1 1674 179 40 7 chr2 159701579 159701899 -90985955 + AluJb SINE Alu 1 525 -87 1093 63 0 53 chr2 159701899 159702089 -90985765 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 1674 179 40 7 chr2 159702089 159702181 -90985673 + AluJb SINE Alu 525 612 0 1536 167 53 25 chr2 159703240 159703365 -90984489 + AluJb SINE Alu 1 121 -191 2307 88 3 10 chr2 159703365 159703671 -90984183 + AluSx SINE Alu 1 304 -8 1536 167 53 25 chr2 159703671 159703827 -90984027 + AluJb SINE Alu 121 290 -22 22 80 0 0 chr2 159703873 159703923 -90983931 + AT_rich Low_complexity Low_complexity 1 50 0 2191 105 0 3 chr2 159703954 159704267 -90983587 - AluSx SINE Alu 0 312 1 227 285 192 10 chr2 159704736 159704929 -90982925 + L2 LINE L2 2807 3034 -238 2217 98 3 20 chr2 159705132 159705437 -90982417 + AluSq SINE Alu 1 300 -13 22 35 0 0 chr2 159705933 159705962 -90981892 + AT_rich Low_complexity Low_complexity 1 29 0 869 247 0 0 chr2 159706137 159706295 -90981559 - FRAM SINE Alu -18 158 1 875 142 13 13 chr2 159707011 159707166 -90980688 + L1MB7 LINE L1 6030 6184 0 234 296 104 17 chr2 159707288 159707403 -90980451 + MIR SINE MIR 20 144 -118 23 33 0 0 chr2 159707489 159707519 -90980335 + AT_rich Low_complexity Low_complexity 1 30 0 228 219 0 0 chr2 159708560 159708601 -90979253 + MER5B DNA MER1_type 1 41 -137 225 213 0 21 chr2 159708639 159708686 -90979168 + MER5B DNA MER1_type 133 178 0 2081 90 0 4 chr2 159709325 159709592 -90978262 - AluSx SINE Alu -46 266 1 237 200 0 29 chr2 159709831 159709901 -90977953 + (TA)n Simple_repeat Simple_repeat 2 69 0 2059 170 19 35 chr2 159709909 159710280 -90977574 + MLT1A1 LTR MaLR 1 365 0 618 260 121 14 chr2 159710416 159710639 -90977215 + MIR SINE MIR 14 260 -2 194 218 77 51 chr2 159711862 159711940 -90975914 + L2 LINE L2 3168 3247 -25 204 280 273 30 chr2 159712189 159712321 -90975533 + MIR SINE MIR 81 244 -18 31 26 0 0 chr2 159712678 159712716 -90975138 + AT_rich Low_complexity Low_complexity 1 38 0 254 29 29 0 chr2 159712992 159713027 -90974827 + (GGA)n Simple_repeat Simple_repeat 3 38 0 24 0 0 0 chr2 159714269 159714293 -90973561 + AT_rich Low_complexity Low_complexity 1 24 0 506 297 125 47 chr2 159715195 159715538 -90972316 + MLT1K LTR MaLR 196 565 -23 992 210 0 39 chr2 159716758 159716939 -90970915 + FAM SINE Alu 1 174 -1 2220 99 0 13 chr2 159716941 159717245 -90970609 + AluY SINE Alu 1 300 -11 203 246 53 0 chr2 159717392 159717449 -90970405 + L2 LINE L2 3187 3246 -26 408 306 48 0 chr2 159717587 159717711 -90970143 - L2 LINE L2 0 3313 3184 185 253 96 24 chr2 159718501 159718584 -90969270 + MIR SINE MIR 74 162 -100 * 743 269 11 34 chr2 159718569 159718833 -90969021 - MIR SINE MIR 0 262 5 24 0 0 0 chr2 159719981 159720005 -90967849 + AT_rich Low_complexity Low_complexity 1 24 0 1721 168 100 24 chr2 159720104 159720443 -90967411 + MLT1A1 LTR MaLR 1 365 0 1251 218 124 51 chr2 159720582 159721017 -90966837 + MLT1C LTR MaLR 1 467 0 1304 174 34 50 chr2 159721388 159721749 -90966105 + MLT1D LTR MaLR 32 501 -4 483 265 0 15 chr2 159722052 159722188 -90965666 + L1ME3 LINE L1 6025 6158 -4 379 221 117 32 chr2 159722526 159722680 -90965174 + MER112 DNA MER1_type 42 208 -52 1060 160 31 0 chr2 159723325 159723519 -90964335 + L1MC3 LINE L1 7410 7609 -176 2137 198 132 32 chr2 159723519 159724050 -90963804 + MLT1G LTR MaLR 7 590 0 449 217 78 35 chr2 159724378 159724493 -90963361 + L2 LINE L2 2492 2611 -703 328 228 33 11 chr2 159724595 159724687 -90963167 - MER5C DNA MER1_type -200 124 31 2632 203 72 3 chr2 159724748 159725319 -90962535 + MER99 DNA DNA 77 686 -142 246 200 0 0 chr2 159725316 159725356 -90962498 - MER3 DNA MER1_type -129 80 41 * 270 300 0 27 chr2 159775562 159775672 -90912182 - LTR67 LTR ERVL -22 535 429 2343 92 0 0 chr2 159775838 159776133 -90911721 - AluSg SINE Alu -15 295 1 1758 132 0 8 chr2 159776153 159776404 -90911450 + AluSx SINE Alu 46 294 -18 529 198 41 25 chr2 159776456 159776577 -90911277 - MLT1B LTR MaLR 0 390 268 529 198 41 25 chr2 159776583 159776704 -90911150 - MLT1B LTR MaLR 0 390 268 1527 200 49 38 chr2 159776710 159777080 -90910774 - MLT1A2 LTR MaLR 0 374 1 2269 114 0 0 chr2 159777275 159777573 -90910281 - AluSx SINE Alu -14 298 1 309 291 10 0 chr2 159777918 159778021 -90909833 + MIR SINE MIR 159 262 0 1479 221 113 36 chr2 159778428 159778895 -90908959 + MLT1D LTR MaLR 1 503 -2 3125 297 46 15 chr2 159779692 159780754 -90907100 + HERV16-F LTR ERVL 474 1568 -3428 3246 311 65 30 chr2 159780820 159780920 -90906934 + HERV16-F LTR ERVL 1736 1831 -3165 2123 107 23 7 chr2 159780920 159781228 -90906626 - AluSp SINE Alu 0 313 1 3246 311 65 30 chr2 159781228 159781616 -90906238 + HERV16-F LTR ERVL 1831 2204 -2792 1571 211 24 63 chr2 159781616 159781692 -90906162 + MLT1A1 LTR MaLR 1 78 -287 1621 143 0 0 chr2 159781692 159781943 -90905911 - AluSx SINE Alu 0 305 55 1571 211 24 63 chr2 159781943 159782244 -90905610 + MLT1A1 LTR MaLR 78 365 0 3246 311 65 30 chr2 159782244 159783038 -90904816 + HERV16-F LTR ERVL 2204 3063 -1933 1346 156 13 5 chr2 159783038 159783262 -90904592 + AluJb SINE Alu 87 312 0 465 332 71 50 chr2 159783275 159784057 -90903797 + HERV16-F LTR ERVL 3059 3534 -1462 1220 346 66 18 chr2 159784142 159784793 -90903061 + HERV16-F LTR ERVL 3996 4677 -977 382 318 29 18 chr2 159785094 159785264 -90902590 + HERV16-F LTR ERVL 4517 4688 -308 23 0 0 0 chr2 159785280 159785303 -90902551 + AT_rich Low_complexity Low_complexity 1 23 0 834 147 0 44 chr2 159785303 159785439 -90902415 - FLAM_C SINE Alu -3 130 1 329 264 69 45 chr2 159785474 159785632 -90902222 - L1M4 LINE L1 -976 5170 5001 2072 81 0 4 chr2 159785632 159785935 -90901919 - AluSg1 SINE Alu 0 324 23 329 264 69 45 chr2 159785935 159786021 -90901833 - L1M4 LINE L1 -1145 5001 4919 1255 304 72 45 chr2 159786115 159786255 -90901599 + MLT2F LTR ERVL 1 136 -527 698 34 11 0 chr2 159786255 159786344 -90901510 + (TCTA)n Simple_repeat Simple_repeat 2 91 0 1255 304 72 45 chr2 159786344 159786828 -90901026 + MLT2F LTR ERVL 136 642 -21 183 100 0 0 chr2 159787349 159787379 -90900475 + (TG)n Simple_repeat Simple_repeat 1 30 0 387 293 43 43 chr2 159787636 159787894 -90899960 + MLT1J LTR MaLR 279 511 0 834 211 0 0 chr2 159787945 159788078 -90899776 - FLAM_A SINE Alu 0 133 1 821 237 0 13 chr2 159788102 159788258 -90899596 - AluJb SINE Alu -26 286 133 1445 191 67 24 chr2 159789016 159789345 -90898509 - MER2 DNA MER2_type -1 343 1 5364 112 56 92 chr2 159789400 159790417 -90897437 - L1MA8 LINE L1 -4 6287 5321 185 0 0 39 chr2 159790417 159790443 -90897411 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 5364 112 56 92 chr2 159790443 159790646 -90897208 - L1MA8 LINE L1 -970 5321 5112 21 0 0 0 chr2 159790723 159790744 -90897110 + AT_rich Low_complexity Low_complexity 1 21 0 1573 132 116 4 chr2 159790751 159791009 -90896845 + AluSx SINE Alu 1 287 -25 193 272 78 68 chr2 159791070 159791173 -90896681 + MIR SINE MIR 36 139 -69 4469 143 22 3 chr2 159791258 159791950 -90895904 + MER50 LTR ERV1 3 707 -27 1919 157 7 3 chr2 159792195 159792489 -90895365 - AluJb SINE Alu -17 295 1 1766 271 84 26 chr2 159792525 159792937 -90894917 - MER20B DNA MER1_type 0 783 397 1513 139 3 133 chr2 159792937 159793269 -90894585 + AluJo SINE Alu 2 290 -12 1766 271 84 26 chr2 159793269 159793472 -90894382 - MER20B DNA MER1_type -386 397 207 2328 107 3 16 chr2 159793472 159793789 -90894065 + AluSp SINE Alu 1 313 0 1766 271 84 26 chr2 159793789 159793906 -90893948 - MER20B DNA MER1_type -576 207 7 185 263 0 70 chr2 159793918 159793975 -90893879 + L2 LINE L2 3261 3313 0 595 273 38 30 chr2 159794007 159794351 -90893503 - MLT1J LTR MaLR -14 497 116 2421 103 0 0 chr2 159794399 159794709 -90893145 + AluSg SINE Alu 1 310 0 4046 212 26 22 chr2 159794974 159795952 -90891902 + L1MB7 LINE L1 5190 6184 0 1655 175 3 31 chr2 159796119 159796405 -90891449 - AluJo SINE Alu -26 286 9 1137 208 42 45 chr2 159796485 159796798 -90891056 - L1M4 LINE L1 -2060 4086 3775 189 0 0 0 chr2 159796818 159796839 -90891015 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 1115 176 21 5 chr2 159796845 159797032 -90890822 - AluSg/x SINE Alu -38 272 83 2558 105 62 3 chr2 159797113 159797466 -90890388 - THE1C LTR MaLR -1 374 1 10314 121 41 10 chr2 159797471 159798997 -90888857 - THE1C-int LTR MaLR -6 1574 1 2776 96 2 53 chr2 159798997 159799066 -90888788 - THE1C LTR MaLR 0 375 304 225 0 0 0 chr2 159799066 159799091 -90888763 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2086 104 0 7 chr2 159799100 159799378 -90888476 - AluSp SINE Alu -37 276 1 2776 96 2 53 chr2 159799378 159799693 -90888161 - THE1C LTR MaLR -79 296 1 2078 149 0 0 chr2 159800026 159800327 -90887527 + AluSx SINE Alu 1 301 -11 1613 228 28 7 chr2 159801985 159802407 -90885447 - L1M4 LINE L1 -2368 3778 3348 923 240 1 5 chr2 159802413 159802621 -90885233 - MLT1A2 LTR MaLR 0 374 183 7582 167 29 25 chr2 159802678 159803077 -90884777 - L1PB1 LINE L1 -1 6866 6470 1938 144 0 23 chr2 159803077 159803383 -90884471 - AluSx SINE Alu -13 299 1 7582 167 29 25 chr2 159803383 159804579 -90883275 - L1PB1 LINE L1 -397 6470 5280 1825 176 3 0 chr2 159804579 159804874 -90882980 - AluSx SINE Alu -16 296 1 7582 167 29 25 chr2 159804874 159805059 -90882795 - L1PB1 LINE L1 -1587 5280 5097 2176 109 0 7 chr2 159805059 159805366 -90882488 - AluSg SINE Alu 0 305 1 7582 167 29 25 chr2 159805366 159806056 -90881798 - L1PB1 LINE L1 -1770 5097 4408 3145 133 124 114 chr2 159806056 159807375 -90880479 - pTR5 LTR ERV1 0 1600 6 8068 169 27 12 chr2 159807375 159810468 -90877386 - L1PB1 LINE L1 -2444 4418 1093 4521 205 54 12 chr2 159810469 159811470 -90876384 - L1PB1 LINE L1 -5815 1048 6 607 193 43 62 chr2 159811488 159811649 -90876205 - MLT1A2 LTR MaLR -216 158 1 3410 240 48 36 chr2 159811680 159811733 -90876121 - L1MEc LINE L1 -2833 3549 3498 2238 110 3 28 chr2 159811733 159812051 -90875803 - AluSx SINE Alu -2 310 1 3410 240 48 36 chr2 159812051 159812885 -90874969 - L1MEc LINE L1 -2884 3498 2675 2165 122 0 7 chr2 159812885 159813180 -90874674 - AluSx SINE Alu -19 293 1 3410 240 48 36 chr2 159813180 159813403 -90874451 - L1MEc LINE L1 -3707 2675 2455 2209 113 0 39 chr2 159813403 159813714 -90874140 - AluSq SINE Alu -14 299 1 3410 240 48 36 chr2 159813714 159813933 -90873921 - L1MEc LINE L1 -3927 2455 2240 21 0 0 0 chr2 159813934 159813955 -90873899 + AT_rich Low_complexity Low_complexity 1 21 0 1402 104 0 0 chr2 159813955 159814147 -90873707 - L1MA2 LINE L1 0 7723 7532 3284 110 9 9 chr2 159814150 159814613 -90873241 - L1PA11 LINE L1 -2 6172 5710 15513 156 20 20 chr2 159814614 159815423 -90872431 - L1MA2 LINE L1 -172 7551 6743 2157 96 48 0 chr2 159815423 159815714 -90872140 - AluSx SINE Alu -7 305 1 15513 156 20 20 chr2 159815714 159818139 -90869715 - L1MA2 LINE L1 -980 6743 4318 2401 118 48 25 chr2 159818139 159818495 -90869359 + THE1B LTR MaLR 1 364 0 12359 93 12 4 chr2 159818496 159820062 -90867792 + THE1B-int LTR MaLR 2 1580 0 2182 131 49 55 chr2 159820062 159820351 -90867503 + THE1B LTR MaLR 1 289 -75 2286 114 0 0 chr2 159820351 159820650 -90867204 - AluSc SINE Alu -10 299 1 2182 131 49 55 chr2 159820650 159820726 -90867128 + THE1B LTR MaLR 289 364 0 15513 156 20 20 chr2 159820726 159820774 -90867080 - L1MA2 LINE L1 -3404 4319 4272 2331 67 0 0 chr2 159820774 159821081 -90866773 - AluY SINE Alu 0 307 1 15513 156 20 20 chr2 159821081 159823878 -90863976 - L1MA2 LINE L1 -3451 4272 1434 410 233 67 67 chr2 159823866 159823905 -90863949 - L1MEc LINE L1 -4157 2227 2189 * 2397 207 13 103 chr2 159823905 159824514 -90863340 - MLT2B3 LTR ERVL 0 554 1 410 233 67 67 chr2 159824514 159824667 -90863187 - L1MEc LINE L1 -4194 2190 2035 634 198 9 0 chr2 159824735 159824841 -90863013 - U6 snRNA snRNA 0 107 1 877 319 98 48 chr2 159824861 159825633 -90862221 - L2 LINE L2 -611 2703 1893 1098 258 179 25 chr2 159825633 159826109 -90861745 + MLT1H1 LTR MaLR 1 549 -6 226 320 92 42 chr2 159826135 159826355 -90861499 - L2 LINE L2 -1426 1888 1647 1727 172 0 20 chr2 159826355 159826652 -90861202 + AluJo SINE Alu 9 299 -13 226 320 92 42 chr2 159826652 159826737 -90861117 - L2 LINE L2 -1667 1647 1568 656 271 21 27 chr2 159826989 159827177 -90860677 - MLT1L LTR MaLR -112 503 317 371 324 58 0 chr2 159827265 159827404 -90860450 + MIR SINE MIR 86 232 -30 1807 50 18 0 chr2 159827503 159827721 -90860133 + L1PA7 LINE L1 5932 6153 -1 193 271 29 93 chr2 159829696 159829782 -90858072 + MIR SINE MIR 82 157 -105 1655 193 21 70 chr2 159829782 159830166 -90857688 - MLT1A1 LTR MaLR 0 365 1 193 271 29 93 chr2 159830166 159830219 -90857635 + MIR SINE MIR 157 212 -50 309 259 23 46 chr2 159831762 159831893 -90855961 + MIR SINE MIR 79 206 -56 2365 128 88 20 chr2 159832597 159832996 -90854858 - MSTA LTR MaLR -2 426 1 2221 176 37 42 chr2 159833031 159833463 -90854391 - MSTB1 LTR MaLR -2 430 1 397 335 15 35 chr2 159833508 159833711 -90854143 - MIR SINE MIR -32 230 32 1096 186 6 0 chr2 159833714 159833891 -90853963 + MER45A DNA AcHobo 1 178 0 24 53 0 0 chr2 159834557 159834595 -90853259 + AT_rich Low_complexity Low_complexity 1 38 0 496 252 84 0 chr2 159834841 159834984 -90852870 - L1ME LINE L1 -454 5667 5513 23 0 0 0 chr2 159836191 159836214 -90851640 + AT_rich Low_complexity Low_complexity 1 23 0 391 329 52 33 chr2 159836492 159836705 -90851149 - MERVL LTR ERVL -725 4760 4544 933 334 48 48 chr2 159836713 159837377 -90850477 + ERVL LTR ERVL 796 1459 -4305 1152 245 68 68 chr2 159837405 159837466 -90850388 - L1MEc LINE L1 -4972 1424 1364 1967 135 11 4 chr2 159837466 159837780 -90850074 + AluSx SINE Alu 1 316 0 1152 245 68 68 chr2 159837780 159838111 -90849743 - L1MEc LINE L1 -5032 1364 1027 2066 129 4 0 chr2 159838111 159838424 -90849430 - AluSx SINE Alu 0 314 1 1152 245 68 68 chr2 159838424 159838542 -90849312 - L1MEc LINE L1 -5368 1028 911 569 252 0 0 chr2 159838543 159838650 -90849204 + Tigger3(Golem) DNA MER2_type 2 108 -2921 467 107 133 0 chr2 159838647 159838722 -90849132 + Tigger3(Golem) DNA MER2_type 2281 2365 -664 * 186 133 0 0 chr2 159838888 159838918 -90848936 + (GGGA)n Simple_repeat Simple_repeat 4 33 0 810 92 0 9 chr2 159839014 159839123 -90848731 - AluSg/x SINE Alu -17 293 186 455 278 0 0 chr2 159839145 159839260 -90848594 - L1MEc LINE L1 -5869 527 413 345 264 56 16 chr2 159839579 159839704 -90848150 - MLT1K LTR MaLR -304 284 155 1141 228 174 38 chr2 159840147 159840590 -90847264 - LTR33 LTR ERVL -17 504 2 231 36 0 0 chr2 159840904 159840932 -90846922 + (A)n Simple_repeat Simple_repeat 1 28 0 591 280 47 19 chr2 159842293 159842372 -90845482 + L1MC4 LINE L1 6470 6545 -1497 2279 128 0 0 chr2 159842372 159842684 -90845170 + AluSx SINE Alu 1 312 0 591 280 47 19 chr2 159842684 159842818 -90845036 + L1MC4 LINE L1 6545 6689 -1353 397 241 17 17 chr2 159842921 159843037 -90844817 + MIR SINE MIR 146 261 -1 335 229 59 59 chr2 159843487 159843605 -90844249 - L2 LINE L2 -30 3283 3166 319 304 145 0 chr2 159843731 159843869 -90843985 + MIR SINE MIR 105 262 0 431 378 49 18 chr2 159844246 159844574 -90843280 - L2 LINE L2 -510 2804 2467 2396 56 0 56 chr2 159845124 159845446 -90842408 + AluY SINE Alu 1 304 -7 471 278 87 48 chr2 159846076 159846306 -90841548 - MIR SINE MIR -14 248 10 1813 110 98 0 chr2 159846562 159846826 -90841028 - AluSg SINE Alu 0 310 21 335 129 9 4 chr2 159846826 159846886 -90840968 - Alu SINE Alu -257 45 2 21 0 0 0 chr2 159849046 159849067 -90838787 + AT_rich Low_complexity Low_complexity 1 21 0 2337 101 3 0 chr2 159849704 159850011 -90837843 - AluSx SINE Alu -4 308 1 292 310 96 43 chr2 159850355 159850542 -90837312 - MLT1K LTR MaLR -254 334 138 255 136 34 85 chr2 159850509 159850568 -90837286 - MLT1K LTR MaLR -349 239 184 * 195 42 0 0 chr2 159850613 159850637 -90837217 + (GGGA)n Simple_repeat Simple_repeat 2 25 0 218 143 143 0 chr2 159850720 159850762 -90837092 + L2 LINE L2 3265 3312 -1 2259 109 10 0 chr2 159851210 159851514 -90836340 - AluSx SINE Alu -5 307 1 259 264 151 9 chr2 159851528 159851634 -90836220 - L1ME LINE L1 -401 5720 5600 1480 173 71 35 chr2 159851959 159852242 -90835612 - AluJo SINE Alu -19 293 1 364 188 100 0 chr2 159852309 159852389 -90835465 + Zaphod DNA AcHobo 3944 4031 0 23 51 0 34 chr2 159854014 159854034 -90833820 + AT_rich Low_complexity Low_complexity 1 20 -37 4330 136 21 8 chr2 159854034 159854532 -90833322 - L1MB2 LINE L1 -17 6154 5643 2064 141 136 21 chr2 159854532 159854915 -90832939 + MSTA LTR MaLR 2 428 0 4330 136 21 8 chr2 159854915 159855071 -90832783 - L1MB2 LINE L1 -528 5643 5491 23 51 0 34 chr2 159855071 159855109 -90832745 + AT_rich Low_complexity Low_complexity 20 57 0 2175 113 7 0 chr2 159855293 159855585 -90832269 - AluSq SINE Alu -19 294 1 210 207 52 0 chr2 159857384 159857442 -90830412 + CT-rich Low_complexity Low_complexity 3 63 0 1830 216 25 43 chr2 159857777 159858222 -90829632 - LTR47B LTR ERVL -6 437 1 441 0 0 0 chr2 159858586 159858635 -90829219 + (CA)n Simple_repeat Simple_repeat 2 50 0 242 253 129 37 chr2 159858758 159858903 -90828951 + L1MD2 LINE L1 6008 6166 0 768 176 30 0 chr2 159859964 159860095 -90827759 - Charlie4 DNA MER1_type -7 1954 1820 311 342 0 9 chr2 159860120 159860234 -90827620 - Charlie8 DNA MER1_type -2210 207 95 362 267 163 45 chr2 159861048 159861124 -90826730 + MER112 DNA MER1_type 2 68 -192 2365 80 3 3 chr2 159861124 159861423 -90826431 + AluSg SINE Alu 1 299 -11 362 267 163 45 chr2 159861423 159861567 -90826287 + MER112 DNA MER1_type 68 248 -12 224 271 47 24 chr2 159861767 159861852 -90826002 - L2 LINE L2 -2 3311 3225 396 314 103 13 chr2 159862404 159862560 -90825294 - MIR3 SINE MIR -5 203 34 351 268 65 43 chr2 159862971 159863109 -90824745 - MER5A DNA MER1_type -12 177 37 22 0 0 0 chr2 159863793 159863815 -90824039 + AT_rich Low_complexity Low_complexity 1 22 0 2362 87 3 3 chr2 159863866 159864166 -90823688 + AluSx SINE Alu 1 300 -12 2402 118 9 3 chr2 159865680 159866027 -90821827 - THE1A LTR MaLR 0 355 7 12837 82 9 1 chr2 159866034 159867602 -90820252 - THE1A-int LTR MaLR 0 1580 1 2031 128 7 7 chr2 159867602 159867900 -90819954 - THE1A LTR MaLR 0 355 58 494 206 10 0 chr2 159868500 159868597 -90819257 + MER94 DNA DNA 1 98 -36 21 0 0 0 chr2 159868742 159868763 -90819091 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 159870029 159870051 -90817803 + AT_rich Low_complexity Low_complexity 1 22 0 541 325 203 10 chr2 159870919 159871304 -90816550 + L3 LINE CR1 1061 1519 -58 198 0 0 0 chr2 159872455 159872477 -90815377 + (CAGC)n Simple_repeat Simple_repeat 2 23 0 2411 75 7 0 chr2 159874105 159874400 -90813454 - AluSg SINE Alu -13 297 1 2212 95 10 13 chr2 159876039 159876343 -90811511 + AluSg SINE Alu 1 303 -7 2534 165 28 28 chr2 159876357 159876824 -90811030 - MLT1C LTR MaLR 0 467 1 385 299 35 28 chr2 159878189 159878333 -90809521 + MIR3 SINE MIR 17 161 -47 391 228 317 14 chr2 159878334 159878479 -90809375 - MIR SINE MIR -13 249 61 366 260 83 0 chr2 159878586 159878682 -90809172 + MER5A DNA MER1_type 9 112 -77 232 391 31 1 chr2 159879749 159879900 -90807954 + MIR SINE MIR 9 161 -63 396 289 52 15 chr2 159879911 159880046 -90807808 + MIR SINE MIR 67 206 -56 21 89 0 0 chr2 159880172 159880228 -90807626 + AT_rich Low_complexity Low_complexity 1 56 0 479 310 84 24 chr2 159882775 159882988 -90804866 + MIR SINE MIR 31 256 -6 239 300 0 0 chr2 159886729 159886789 -90801065 - L2 LINE L2 -5 3308 3249 1809 165 11 4 chr2 159887274 159887553 -90800301 + AluJb SINE Alu 5 285 -27 722 225 0 0 chr2 159889463 159889592 -90798262 + FLAM_A SINE Alu 1 129 -4 1412 98 60 0 chr2 159889772 159890006 -90797848 + L1MA2 LINE L1 6052 6299 -5 420 20 0 0 chr2 159890104 159890153 -90797701 + (TG)n Simple_repeat Simple_repeat 2 50 0 2083 111 0 0 chr2 159890447 159890765 -90797089 + AluSg SINE Alu 1 318 0 569 116 22 3 chr2 159890996 159891138 -90796716 + MER53 DNA DNA 1 189 0 241 250 53 40 chr2 159891432 159891508 -90796346 + L2 LINE L2 3196 3272 0 * 351 291 56 3 chr2 159891496 159891631 -90796223 + MIR SINE MIR 7 160 -66 186 103 0 0 chr2 159891672 159891701 -90796153 + (CAT)n Simple_repeat Simple_repeat 3 31 0 1123 216 5 0 chr2 159891707 159891929 -90795925 - MER58A DNA MER1_type -1 223 1 463 338 196 5 chr2 159892226 159892445 -90795409 - MIR SINE MIR 0 262 2 201 39 0 0 chr2 159892528 159892554 -90795300 + (TGGA)n Simple_repeat Simple_repeat 4 29 0 1622 137 49 19 chr2 159892976 159893239 -90794615 + AluSx SINE Alu 42 312 0 1698 114 19 35 chr2 159893739 159893978 -90793876 - L1MB3 LINE L1 -17 6166 5932 2583 115 53 24 chr2 159893978 159894394 -90793460 - MSTC LTR MaLR 0 428 1 1698 114 19 35 chr2 159894394 159894470 -90793384 - L1MB3 LINE L1 -251 5932 5856 4037 165 34 20 chr2 159895140 159895376 -90792478 - L1MC3 LINE L1 -2 7783 7552 1559 231 53 29 chr2 159895376 159895831 -90792023 - MLT1C LTR MaLR -1 466 1 4037 165 34 20 chr2 159895831 159896483 -90791371 - L1MC3 LINE L1 -233 7552 6883 717 112 20 33 chr2 159896494 159896646 -90791208 - L1MC3 LINE L1 -68 7717 7568 1027 194 80 48 chr2 159896787 159896956 -90790898 + MLT1B LTR MaLR 1 163 -227 2535 67 0 6 chr2 159896956 159897269 -90790585 + AluY SINE Alu 1 311 0 1027 194 80 48 chr2 159897269 159897320 -90790534 + MLT1B LTR MaLR 163 211 -179 333 0 0 0 chr2 159897320 159897357 -90790497 + (TC)n Simple_repeat Simple_repeat 1 37 0 279 0 0 0 chr2 159897366 159897397 -90790457 + (TG)n Simple_repeat Simple_repeat 2 32 0 1027 194 80 48 chr2 159897397 159897608 -90790246 + MLT1B LTR MaLR 218 390 0 841 113 56 38 chr2 159897609 159897769 -90790085 - L1MC3 LINE L1 -909 6876 6714 200 260 40 0 chr2 159899019 159899069 -90788785 + (CATG)n Simple_repeat Simple_repeat 3 54 0 494 323 8 15 chr2 159899102 159899362 -90788492 + MIR SINE MIR 4 261 -1 1951 181 22 8 chr2 159899548 159899913 -90787941 + MLT1A2 LTR MaLR 1 370 -4 379 323 31 0 chr2 159900108 159900235 -90787619 - MIR3 SINE MIR 0 208 78 738 253 6 0 chr2 159900924 159901098 -90786756 + MER58A DNA MER1_type 45 219 -5 979 230 5 0 chr2 159901102 159901306 -90786548 + MER3 DNA MER1_type 5 209 0 664 324 88 0 chr2 159902082 159902344 -90785510 + L2 LINE L2 3028 3312 -1 6748 65 16 1 chr2 159902544 159903976 -90783878 - L1PA7 LINE L1 0 6154 4711 360 78 0 0 chr2 159903976 159904027 -90783827 + L1P3 LINE L1 20 70 -6391 222 205 0 0 chr2 159906317 159906356 -90781498 + GA-rich Low_complexity Low_complexity 2 40 0 25 0 0 0 chr2 159906699 159906724 -90781130 + AT_rich Low_complexity Low_complexity 1 25 0 203 161 0 0 chr2 159907536 159907567 -90780287 + MIR3 SINE MIR 124 154 -54 342 0 0 0 chr2 159907712 159907750 -90780104 + (TA)n Simple_repeat Simple_repeat 2 39 0 2439 55 21 0 chr2 159907752 159908041 -90779813 - AluY SINE Alu 0 311 17 1307 245 112 56 chr2 159908170 159908696 -90779158 + LTR41 LTR ERVL 1 556 -217 1170 183 93 11 chr2 159908696 159908964 -90778890 - MLT1A1 LTR MaLR 0 365 76 852 178 13 98 chr2 159908965 159909201 -90778653 + LTR41 LTR ERVL 552 767 -6 520 294 55 7 chr2 159909367 159909513 -90778341 - MIR3 SINE MIR -54 154 2 19834 158 30 23 chr2 159909549 159910225 -90777629 + L1MA2 LINE L1 15 685 -7038 2272 110 13 0 chr2 159910225 159910525 -90777329 + AluSx SINE Alu 7 310 -2 19834 158 30 23 chr2 159910525 159911588 -90776266 + L1MA2 LINE L1 685 1739 -5984 324 0 0 0 chr2 159911588 159911624 -90776230 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 19834 158 30 23 chr2 159911624 159912839 -90775015 + L1MA2 LINE L1 1739 2944 -4779 1531 224 3 19 chr2 159912839 159913156 -90774698 + AluJb SINE Alu 1 312 0 19834 158 30 23 chr2 159913156 159913634 -90774220 + L1MA2 LINE L1 2944 3417 -4306 339 25 0 0 chr2 159913634 159913674 -90774180 + (CA)n Simple_repeat Simple_repeat 1 40 0 19834 158 30 23 chr2 159913674 159917835 -90770019 + L1MA2 LINE L1 3417 7680 -43 1989 133 77 14 chr2 159917835 159918188 -90769666 + THE1C LTR MaLR 1 375 0 19834 158 30 23 chr2 159918188 159918233 -90769621 + L1MA2 LINE L1 7680 7723 0 193 279 139 23 chr2 159919128 159919257 -90768597 - MIR SINE MIR 0 262 119 23 68 0 0 chr2 159919907 159919951 -90767903 + AT_rich Low_complexity Low_complexity 1 44 0 3147 126 30 0 chr2 159920307 159920837 -90767017 + L1MA3 LINE L1 5535 6080 -225 1916 92 7 52 chr2 159920847 159920900 -90766954 - L1PB1 LINE L1 -2 6865 6811 2086 122 10 10 chr2 159920900 159921196 -90766658 - AluSx SINE Alu -16 296 1 1916 92 7 52 chr2 159921196 159921448 -90766406 - L1PB1 LINE L1 -56 6811 6574 7175 53 8 0 chr2 159921448 159922661 -90765193 + L1PA7 LINE L1 4934 6153 -1 525 82 47 0 chr2 159922662 159922747 -90765107 - L1PB1 LINE L1 -281 6586 6498 249 197 0 0 chr2 159922747 159922808 -90765046 + (TA)n Simple_repeat Simple_repeat 2 62 0 13753 162 42 7 chr2 159922822 159928974 -90758880 - L1PB1 LINE L1 -360 6507 1 1211 141 12 52 chr2 159928976 159929167 -90758687 + L1MA3 LINE L1 6067 6264 -41 2388 51 3 10 chr2 159929167 159929463 -90758391 + AluY SINE Alu 1 294 -17 180 0 0 0 chr2 159929469 159929489 -90758365 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1211 141 12 52 chr2 159929489 159929539 -90758315 + L1MA3 LINE L1 6269 6305 0 448 297 115 35 chr2 159929856 159930395 -90757459 + L1MEd LINE L1 309 890 -5229 369 330 11 11 chr2 159930769 159930948 -90756906 - MLT1H LTR MaLR -363 186 8 486 298 71 17 chr2 159930979 159931484 -90756370 + L1MEd LINE L1 993 1626 -864 1982 132 0 0 chr2 159931894 159932166 -90755688 - AluSx SINE Alu -39 273 2 330 26 0 0 chr2 159932214 159932253 -90755601 + (CA)n Simple_repeat Simple_repeat 2 40 0 510 299 63 21 chr2 159932445 159932780 -90755074 + L1MC/D LINE L1 5258 5606 -2202 284 139 19 46 chr2 159932892 159933000 -90754854 + (TA)n Simple_repeat Simple_repeat 1 105 0 22 35 0 0 chr2 159933279 159933308 -90754546 + AT_rich Low_complexity Low_complexity 1 29 0 675 272 35 31 chr2 159934467 159934695 -90753159 + MIR SINE MIR 8 236 -26 22 0 0 0 chr2 159935238 159935260 -90752594 + AT_rich Low_complexity Low_complexity 1 22 0 2300 92 0 0 chr2 159935263 159935578 -90752276 + AluSx SINE Alu 1 315 0 27 62 0 0 chr2 159935990 159936038 -90751816 + AT_rich Low_complexity Low_complexity 1 48 0 214 244 0 0 chr2 159936094 159936135 -90751719 + L2 LINE L2 3267 3307 -6 195 344 19 69 chr2 159937932 159938092 -90749762 + L3b LINE CR1 1161 1312 -271 322 307 0 0 chr2 159938127 159938215 -90749639 + L2 LINE L2 3185 3272 0 524 311 22 0 chr2 159942348 159942483 -90745371 + MER5B DNA MER1_type 40 177 -1 615 232 166 7 chr2 159942625 159942776 -90745078 - MER5A DNA MER1_type 0 189 15 197 286 151 59 chr2 159943221 159943336 -90744518 - L2 LINE L2 -222 3050 2925 304 296 39 67 chr2 159943336 159943515 -90744339 - MER5B DNA MER1_type 0 178 5 2001 130 4 0 chr2 159943586 159943863 -90743991 + AluSx SINE Alu 1 278 -34 939 85 0 0 chr2 159943864 159943994 -90743860 + (GGGAA)n Simple_repeat Simple_repeat 4 133 0 527 271 114 12 chr2 159944369 159944535 -90743319 + MER5A DNA MER1_type 1 183 -6 343 256 0 49 chr2 159944550 159944632 -90743222 - MIR SINE MIR -157 105 28 380 312 71 0 chr2 159944683 159944837 -90743017 + MIR SINE MIR 37 201 -61 309 225 138 51 chr2 159945705 159945843 -90742011 - L1ME4a LINE L1 -6 6115 5966 220 326 96 30 chr2 159946302 159946438 -90741416 - MIR3 SINE MIR -73 135 14 207 167 0 0 chr2 159946573 159946615 -90741239 + GA-rich Low_complexity Low_complexity 3 44 0 346 256 67 110 chr2 159947127 159947343 -90740511 - MIR SINE MIR -8 254 44 180 47 47 47 chr2 159947376 159947419 -90740435 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 318 87 0 0 chr2 159947534 159947580 -90740274 + (CA)n Simple_repeat Simple_repeat 1 46 0 417 20 0 0 chr2 159947834 159947884 -90739970 + (TG)n Simple_repeat Simple_repeat 2 51 0 1117 242 43 70 chr2 159948295 159948712 -90739142 - MLT1J2 LTR MaLR -44 406 1 399 274 40 0 chr2 159948832 159948956 -90738898 + L1M4 LINE L1 2912 3040 -3106 6822 43 20 0 chr2 159948958 159950105 -90737749 - L1PA5 LINE L1 -7 6147 5003 1345 225 82 27 chr2 159950124 159950830 -90737024 - L1MEc LINE L1 -3570 2645 1966 * 2964 219 11 0 chr2 159950823 159951553 -90736301 + L1M4 LINE L1 4409 5146 -1000 223 378 65 20 chr2 159952871 159953117 -90734737 - MIR SINE MIR 0 262 6 255 307 79 39 chr2 159955607 159955734 -90732120 - MIR3 SINE MIR -1 207 76 2058 158 3 3 chr2 159958675 159958985 -90728869 + AluSx SINE Alu 1 310 -2 946 196 0 6 chr2 159959135 159959314 -90728540 - MER58A DNA MER1_type -1 223 46 552 262 54 13 chr2 159959372 159959521 -90728333 - L2 LINE L2 0 3313 3159 663 201 40 25 chr2 159961247 159961446 -90726408 + MER20B DNA MER1_type 582 783 0 421 170 38 19 chr2 159961534 159961640 -90726214 + Charlie8 DNA MER1_type 49 156 -2261 187 289 14 99 chr2 159962983 159963095 -90724759 - MIR SINE MIR -63 145 76 2147 265 165 4 chr2 159963217 159964107 -90723747 - L2 LINE L2 -303 3010 1984 2105 129 10 16 chr2 159964356 159964666 -90723188 - AluSx SINE Alu -4 308 1 532 262 112 115 chr2 159966099 159966404 -90721450 + L2 LINE L2 3010 3313 0 309 308 7 7 chr2 159967514 159967639 -90720215 - MIR SINE MIR -83 125 1 367 298 112 6 chr2 159968369 159968530 -90719324 - MIR3 SINE MIR -15 193 16 1425 173 24 97 chr2 159968706 159969036 -90718818 - AluJo SINE Alu -6 306 1 2050 87 0 32 chr2 159969144 159969421 -90718433 + AluY SINE Alu 38 305 -6 268 279 157 76 chr2 159969694 159969866 -90717988 - MER5A DNA MER1_type 0 189 4 363 306 52 8 chr2 159971350 159971484 -90716370 + MIR SINE MIR 63 202 -60 5368 142 36 10 chr2 159971553 159972607 -90715247 + L1MA7 LINE L1 5217 6290 -1 569 328 50 11 chr2 159975471 159975733 -90712121 + L2 LINE L2 2384 2655 -659 377 258 57 94 chr2 159975980 159976139 -90711715 + MER91A DNA MER1_type 43 195 -1 474 341 111 22 chr2 159976155 159976516 -90711338 + L2 LINE L2 2921 3313 0 261 248 195 40 chr2 159977616 159977765 -90710089 - MER5B DNA MER1_type -4 174 3 265 300 100 0 chr2 159977873 159977963 -90709891 + L2 LINE L2 3143 3241 -31 58 78 0 0 chr2 159977979 159978107 -90709747 + AT_rich Low_complexity Low_complexity 1 128 0 706 207 154 0 chr2 159978745 159978991 -90708863 + LTR33 LTR ERVL 238 521 0 279 370 28 62 chr2 159979285 159979642 -90708212 - L3 LINE CR1 -1136 441 97 22 0 0 0 chr2 159979877 159979899 -90707955 + AT_rich Low_complexity Low_complexity 1 22 0 1791 160 22 22 chr2 159981471 159981833 -90706021 + L1MB3 LINE L1 5794 6155 -28 329 313 117 18 chr2 159983080 159983243 -90704611 + L1MEd LINE L1 605 783 -5336 1865 243 81 6 chr2 159983363 159983996 -90703858 + L1PA5 LINE L1 6 685 -6178 482 171 226 0 chr2 159983997 159984205 -90703649 + L1PA5 LINE L1 990 1393 -5470 1696 167 107 31 chr2 159984248 159984668 -90703186 + LTR10A LTR ERV1 97 548 -61 13938 190 19 11 chr2 159984681 159986852 -90701002 + L1PA5 LINE L1 1390 3542 -3325 2386 81 3 0 chr2 159986852 159987148 -90700706 + AluY SINE Alu 1 297 -14 13938 190 19 11 chr2 159987148 159989969 -90697885 + L1PA5 LINE L1 3542 6487 -380 396 0 0 0 chr2 159989973 159990017 -90697837 + (TA)n Simple_repeat Simple_repeat 1 44 0 995 33 0 0 chr2 159990523 159990644 -90697210 - L1PA5 LINE L1 -1 6153 6033 558 49 85 0 chr2 159990644 159990726 -90697128 + L1PA5 LINE L1 6671 6759 -111 7453 30 7 0 chr2 159991619 159992612 -90695242 + L1PA3 LINE L1 5158 6155 0 28 0 0 0 chr2 159992680 159992708 -90695146 + AT_rich Low_complexity Low_complexity 1 28 0 384 303 45 70 chr2 159993151 159993329 -90694525 + L1MEd LINE L1 796 964 -5155 2299 123 0 0 chr2 159993329 159993630 -90694224 + AluSq SINE Alu 1 301 -12 384 303 45 70 chr2 159993630 159993781 -90694073 + L1MEd LINE L1 964 1117 -5002 201 175 0 0 chr2 159993787 159993827 -90694027 + (CATATA)n Simple_repeat Simple_repeat 4 43 0 2459 53 0 20 chr2 159993858 159994159 -90693695 - AluY SINE Alu -16 295 1 802 274 66 99 chr2 159994178 159994601 -90693253 + L1M4 LINE L1 4051 4486 -1660 376 73 18 0 chr2 159994601 159994656 -90693198 + MER41B LTR ERV1 479 534 -101 802 274 66 99 chr2 159994656 159995207 -90692647 + L1M4 LINE L1 4486 5045 -1101 2078 99 7 0 chr2 159995231 159995524 -90692330 - THE1A LTR MaLR 0 355 61 241 82 0 20 chr2 159995735 159995784 -90692070 + LTR66 LTR ERVL 393 440 -170 300 66 92 13 chr2 159995790 159995866 -90691988 + (CATAT)n Simple_repeat Simple_repeat 1 82 0 2539 93 3 13 chr2 159995880 159996258 -90691596 + L1PB1 LINE L1 5778 6151 0 267 79 0 0 chr2 159996307 159996345 -90691509 + (ATG)n Simple_repeat Simple_repeat 2 39 0 687 237 15 61 chr2 159996387 159996585 -90691269 - MIR SINE MIR -67 195 7 379 267 82 66 chr2 159996675 159997258 -90690596 + L1MEd LINE L1 948 1629 -861 16803 141 12 35 chr2 159997573 159998929 -90688925 + L1M1 LINE L1 13 1399 -6166 1775 145 4 11 chr2 159998929 159999205 -90688649 + AluSq SINE Alu 1 274 -39 16803 141 12 35 chr2 159999205 160000724 -90687130 + L1M1 LINE L1 1399 2822 -4743 778 300 30 9 chr2 160000927 160001157 -90686697 + MIR SINE MIR 28 262 0 481 218 96 80 chr2 160001290 160001716 -90686138 - MLT1H LTR MaLR -106 436 25 641 319 76 23 chr2 160003069 160003737 -90684117 + ERVL LTR ERVL 4639 5333 -152 288 0 0 0 chr2 160003768 160003800 -90684054 + (CA)n Simple_repeat Simple_repeat 2 33 0 255 281 174 25 chr2 160004169 160004365 -90683489 + LTR67 LTR ERVL 33 257 -300 272 318 8 30 chr2 160004551 160004683 -90683171 + LTR67 LTR ERVL 429 557 0 243 306 0 0 chr2 160004683 160004745 -90683109 + MIR3 SINE MIR 144 205 -3 22 35 0 0 chr2 160004748 160004777 -90683077 + AT_rich Low_complexity Low_complexity 1 29 0 338 224 9 0 chr2 160004842 160004958 -90682896 + (TA)n Simple_repeat Simple_repeat 2 118 0 7516 96 6 0 chr2 160005362 160006476 -90681378 + L1P LINE L1 1721 2841 -3305 2290 88 0 50 chr2 160006476 160006796 -90681058 + AluY SINE Alu 1 304 -7 1696 70 0 0 chr2 160006796 160007011 -90680843 + L1PA7 LINE L1 5939 6153 -1 6746 40 1 1 chr2 160008886 160009710 -90678144 + L1PA4 LINE L1 5332 6155 0 246 341 110 26 chr2 160010403 160010831 -90677023 + L2 LINE L2 1527 1990 -1324 1021 327 116 34 chr2 160010867 160011946 -90675908 - L2 LINE L2 0 3313 2152 195 292 97 35 chr2 160011950 160012094 -90675760 + L2 LINE L2 2909 3061 -211 188 379 0 0 chr2 160012410 160012468 -90675386 + L2 LINE L2 3184 3241 -31 2010 133 12 3 chr2 160013562 160013894 -90673960 + L1MA4 LINE L1 5955 6289 -11 2083 130 0 3 chr2 160014632 160014924 -90672930 + AluSc SINE Alu 1 291 -18 26 30 0 0 chr2 160015220 160015253 -90672601 + AT_rich Low_complexity Low_complexity 1 33 0 236 333 95 0 chr2 160015302 160015449 -90672405 + L1ME4a LINE L1 5664 5824 -297 305 145 159 58 chr2 160015555 160015693 -90672161 + L1ME4a LINE L1 5959 6110 -11 1236 93 11 0 chr2 160015694 160015876 -90671978 + L1PA13 LINE L1 5974 6157 -6 311 282 60 8 chr2 160017423 160017540 -90670314 - MIR3 SINE MIR 0 208 86 2449 295 164 14 chr2 160017624 160019257 -90668597 - L2 LINE L2 0 3313 1422 845 242 116 5 chr2 160019739 160019954 -90667900 + MIR SINE MIR 3 241 -21 650 222 45 45 chr2 160020278 160020454 -90667400 - MER5B DNA MER1_type 0 178 3 207 0 0 0 chr2 160021424 160021447 -90666407 + (A)n Simple_repeat Simple_repeat 1 23 0 366 344 113 13 chr2 160022271 160022582 -90665272 + L1M4 LINE L1 4672 5013 -1133 364 358 7 22 chr2 160022639 160022776 -90665078 + MER91A DNA MER1_type 1 135 -61 717 40 0 30 chr2 160022846 160022945 -90664909 - L1PA5 LINE L1 -2 6152 6057 1063 217 132 15 chr2 160023054 160023381 -90664473 + MLT1A1 LTR MaLR 1 365 0 31 26 0 0 chr2 160023592 160023630 -90664224 + AT_rich Low_complexity Low_complexity 1 38 0 1485 62 0 0 chr2 160023688 160023865 -90663989 - AluSg/x SINE Alu -2 310 134 866 192 0 6 chr2 160023898 160024065 -90663789 - MLT1B LTR MaLR 0 390 225 887 277 41 8 chr2 160024133 160024375 -90663479 - MIR SINE MIR -11 251 2 472 96 27 0 chr2 160024521 160024594 -90663260 + MER116 DNA Mariner 5 79 -1 366 212 0 0 chr2 160024612 160024711 -90663143 + (TA)n Simple_repeat Simple_repeat 2 100 0 2234 86 0 10 chr2 160024715 160025006 -90662848 - AluY SINE Alu -23 288 1 21 0 0 0 chr2 160025364 160025385 -90662469 + AT_rich Low_complexity Low_complexity 1 21 0 498 255 74 47 chr2 160025547 160025696 -90662158 - MIR3 SINE MIR -37 171 19 307 194 30 0 chr2 160026412 160026479 -90661375 - L1MC1 LINE L1 -5 6328 6260 748 202 39 6 chr2 160026630 160026808 -90661046 + LTR41 LTR ERVL 1 184 -589 357 232 89 47 chr2 160027065 160027322 -90660532 + LTR41 LTR ERVL 510 795 0 341 307 53 0 chr2 160027322 160027436 -90660418 + MIR3 SINE MIR 86 205 -3 350 248 98 23 chr2 160029283 160029416 -90658438 + L1ME4a LINE L1 5978 6120 -1 281 352 181 34 chr2 160029753 160030134 -90657720 + L2 LINE L2 200 636 -2678 39138 51 6 2 chr2 160030135 160035340 -90652514 + L1P LINE L1 2 5224 -922 24 0 0 0 chr2 160036034 160036058 -90651796 + AT_rich Low_complexity Low_complexity 1 24 0 757 346 103 18 chr2 160037494 160037951 -90649903 - LTR67 LTR ERVL -18 539 44 369 276 12 77 chr2 160038025 160038195 -90649659 - L2 LINE L2 -809 2505 2347 2009 145 3 3 chr2 160038330 160038627 -90649227 + AluSc SINE Alu 1 297 -12 23 33 0 0 chr2 160039412 160039442 -90648412 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 160039514 160039538 -90648316 + AT_rich Low_complexity Low_complexity 1 24 0 5617 180 65 33 chr2 160039607 160041975 -90645879 + L1MB4 LINE L1 3733 6179 -1 275 186 174 0 chr2 160042055 160042141 -90645713 + L1MC4 LINE L1 7942 8042 0 463 327 101 38 chr2 160042151 160042469 -90645385 + HAL1b LINE L1 73 410 -938 23 33 0 0 chr2 160042825 160042855 -90644999 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr2 160043021 160043058 -90644796 + AT_rich Low_complexity Low_complexity 1 37 0 1852 154 7 3 chr2 160043080 160043379 -90644475 - AluSx SINE Alu -12 300 1 873 322 3 3 chr2 160043386 160043669 -90644185 + L1MC4 LINE L1 6615 6897 -1145 905 262 88 62 chr2 160043685 160044136 -90643718 + MLT1G1 LTR MaLR 16 427 -115 1917 213 57 25 chr2 160044136 160044624 -90643230 + MLT1D LTR MaLR 2 505 0 905 262 88 62 chr2 160044624 160044737 -90643117 + MLT1G1 LTR MaLR 427 536 -6 1308 243 41 93 chr2 160044740 160045489 -90642365 + L1MC5 LINE L1 6818 7527 -434 1357 338 84 8 chr2 160045547 160046271 -90641583 - L2 LINE L2 -1156 2158 1380 861 255 208 21 chr2 160046970 160047484 -90640370 - L1ME3A LINE L1 -208 5962 5353 2504 150 19 0 chr2 160047520 160047941 -90639913 + L1P LINE L1 4850 5278 -868 334 361 60 53 chr2 160050726 160051028 -90636826 - L2 LINE L2 -574 2740 2437 21 36 0 0 chr2 160051193 160051221 -90636633 + AT_rich Low_complexity Low_complexity 1 28 0 485 292 115 6 chr2 160051436 160051633 -90636221 - MIR SINE MIR -13 249 32 1420 143 17 162 chr2 160051827 160052234 -90635620 - MER7A DNA MER2_type 0 346 1 248 322 35 0 chr2 160052918 160053005 -90634849 + L2 LINE L2 3224 3313 0 26 0 0 0 chr2 160053085 160053111 -90634743 + AT_rich Low_complexity Low_complexity 1 26 0 311 160 13 0 chr2 160053176 160053251 -90634603 + (TCCA)n Simple_repeat Simple_repeat 3 78 0 32 26 0 0 chr2 160053456 160053495 -90634359 + AT_rich Low_complexity Low_complexity 1 39 0 30 45 0 0 chr2 160053552 160053596 -90634258 + AT_rich Low_complexity Low_complexity 1 44 0 769 248 59 5 chr2 160055120 160055322 -90632532 + MIR SINE MIR 37 249 -13 397 270 48 96 chr2 160055294 160055514 -90632340 - MIR SINE MIR -51 211 6 * 2030 93 45 0 chr2 160056482 160056751 -90631103 - AluSc SINE Alu -7 302 22 181 217 65 0 chr2 160056929 160056975 -90630879 + MER5A DNA MER1_type 17 65 -124 451 290 14 28 chr2 160057551 160057696 -90630158 - MIR SINE MIR -13 249 107 789 321 53 56 chr2 160058659 160059126 -90628728 - L2 LINE L2 0 3272 2807 319 296 236 7 chr2 160059483 160059916 -90627938 - L2 LINE L2 -1054 2260 1729 453 205 8 90 chr2 160061776 160061898 -90625956 - L2 LINE L2 -6 3307 3196 526 216 40 40 chr2 160062040 160062188 -90625666 + MER5B DNA MER1_type 31 178 0 983 181 22 0 chr2 160062199 160062381 -90625473 - MER5A DNA MER1_type -1 188 3 421 159 115 26 chr2 160063260 160063373 -90624481 + MER97c DNA MER1_type? 56 178 -912 209 396 10 0 chr2 160063392 160063493 -90624361 + L2 LINE L2 311 412 -2902 247 200 0 0 chr2 160063823 160063863 -90623991 + MER91 DNA MER1_type 25 64 -76 285 333 0 30 chr2 160064041 160064176 -90623678 + L2 LINE L2 1713 1843 -1471 448 347 76 42 chr2 160064677 160065153 -90622701 + L2 LINE L2 1588 2079 -1235 2101 157 24 21 chr2 160065932 160066574 -90621280 + L1P4 LINE L1 4908 5550 -616 415 260 104 0 chr2 160066606 160066760 -90621094 + MLT1K LTR MaLR 414 583 -5 488 247 25 32 chr2 160066923 160067081 -90620773 + MER103 DNA DNA 8 164 -2 355 299 75 34 chr2 160067181 160067328 -90620526 + L2 LINE L2 3102 3254 -18 373 326 105 23 chr2 160070898 160071070 -90616784 + MER5A DNA MER1_type 3 188 -1 1945 193 35 35 chr2 160072469 160072904 -90614950 - MER63B DNA MER1_type 0 436 2 381 313 106 14 chr2 160073412 160073620 -90614234 + L3b LINE CR1 1122 1348 -235 228 125 0 69 chr2 160074294 160074366 -90613488 + (TTAA)n Simple_repeat Simple_repeat 4 70 0 196 386 34 0 chr2 160074409 160074497 -90613357 + L2 LINE L2 2792 2882 -432 260 346 0 0 chr2 160074682 160074760 -90613094 + L2 LINE L2 3134 3211 -61 30 21 0 21 chr2 160075649 160075678 -90612176 + AT_rich Low_complexity Low_complexity 1 30 -17 2065 120 0 7 chr2 160075678 160075969 -90611885 - AluSx SINE Alu -23 289 1 30 21 0 21 chr2 160075969 160075987 -90611867 + AT_rich Low_complexity Low_complexity 30 47 0 226 179 18 36 chr2 160076477 160076533 -90611321 + L3 LINE CR1 812 866 -711 364 269 94 65 chr2 160076565 160076820 -90611034 - L1MC4 LINE L1 -355 7687 7331 843 246 133 0 chr2 160076821 160077016 -90610838 + MER58A DNA MER1_type 1 221 -3 681 268 78 12 chr2 160077030 160077528 -90610326 - L1MC4 LINE L1 -547 7495 6733 304 255 175 65 chr2 160077565 160077823 -90610031 - L1MC4a LINE L1 -1211 6597 6294 1733 191 0 6 chr2 160077823 160078137 -90609717 - AluJb SINE Alu 0 312 1 304 255 175 65 chr2 160078137 160078203 -90609651 - L1MC4a LINE L1 -1514 6294 6237 702 274 50 44 chr2 160078210 160078527 -90609327 + L1MC4 LINE L1 7694 8012 -30 1415 178 46 23 chr2 160078959 160079263 -90608591 - MER58B DNA MER1_type -2 339 29 275 309 113 98 chr2 160079978 160080305 -90607549 + L3 LINE CR1 1214 1545 -32 322 346 128 58 chr2 160080501 160080689 -90607165 - L2 LINE L2 0 3272 3072 1408 273 60 16 chr2 160080689 160081145 -90606709 + MLT1G LTR MaLR 1 504 -91 516 319 195 8 chr2 160081218 160081914 -90605940 - L2 LINE L2 -257 3056 2230 281 309 12 0 chr2 160081984 160082065 -90605789 - MIR SINE MIR -147 115 34 591 362 32 24 chr2 160082069 160082447 -90605407 + HERVL LTR ERVL 2949 3329 -2325 429 316 8 0 chr2 160082453 160082586 -90605268 - MIR SINE MIR -1 261 128 235 200 20 0 chr2 160083022 160083072 -90604782 + L2 LINE L2 3263 3313 0 281 253 23 0 chr2 160083073 160083160 -90604694 + HERVL LTR ERVL 3858 3946 -1818 366 262 94 58 chr2 160083225 160083416 -90604438 + HERVL LTR ERVL 4063 4260 -1504 231 77 39 77 chr2 160084102 160084154 -90603700 + (TTTAA)n Simple_repeat Simple_repeat 5 54 0 222 37 0 0 chr2 160084966 160084993 -90602861 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 351 0 0 0 chr2 160084992 160085031 -90602823 + (CA)n Simple_repeat Simple_repeat 1 39 0 191 35 0 35 chr2 160085634 160085663 -90602191 + (TTAGG)n Simple_repeat Simple_repeat 3 30 0 285 320 0 0 chr2 160085717 160085792 -90602062 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 328 250 215 12 chr2 160086894 160087066 -90600788 - MIR SINE MIR -9 253 47 469 263 68 32 chr2 160087915 160088105 -90599749 - MLT1E2-int LTR MaLR -493 878 682 914 227 27 47 chr2 160088295 160088793 -90599061 - MLT1E2-int LTR MaLR -766 605 1 1619 232 129 33 chr2 160088793 160089381 -90598473 - MLT1E2 LTR MaLR 0 626 5 192 77 0 0 chr2 160091017 160091043 -90596811 + (CA)n Simple_repeat Simple_repeat 2 27 0 285 232 11 11 chr2 160091606 160091701 -90596153 + L1MC/D LINE L1 5191 5285 -861 284 302 63 19 chr2 160091710 160091869 -90595985 + L1MC/D LINE L1 5317 5482 -639 237 291 115 32 chr2 160091903 160092115 -90595739 + L1MC/D LINE L1 5588 5819 -374 2284 94 3 0 chr2 160092115 160092403 -90595451 + AluSx SINE Alu 1 289 -23 237 291 115 32 chr2 160092403 160092429 -90595425 + L1MC/D LINE L1 5819 5841 -352 1489 40 0 0 chr2 160092450 160092626 -90595228 - L1PA8 LINE L1 -8 6164 5989 37 39 0 0 chr2 160092944 160092995 -90594859 + AT_rich Low_complexity Low_complexity 1 51 0 212 261 23 45 chr2 160095305 160095393 -90592461 + CT-rich Low_complexity Low_complexity 2 87 0 799 283 77 51 chr2 160095941 160096507 -90591347 + HAL1b LINE L1 1191 1338 -10 270 356 132 12 chr2 160097042 160097466 -90590388 + L2 LINE L2 1894 2368 -946 215 222 19 56 chr2 160098137 160098191 -90589663 + L2 LINE L2 3213 3264 -8 405 146 21 31 chr2 160098219 160098315 -90589539 + L1MC5 LINE L1 7134 7228 -733 1096 210 89 99 chr2 160098390 160099028 -90588826 + L1MC5 LINE L1 7226 7857 -104 213 39 0 0 chr2 160099648 160099674 -90588180 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 29 28 0 0 chr2 160101018 160101054 -90586800 + AT_rich Low_complexity Low_complexity 1 36 0 676 330 56 35 chr2 160101272 160101560 -90586294 + L2 LINE L2 2979 3272 0 276 227 30 0 chr2 160102526 160102592 -90585262 + MIR SINE MIR 81 148 -60 372 198 170 9 chr2 160102593 160102699 -90585155 - MER112 DNA MER1_type 0 260 138 310 296 0 0 chr2 160102741 160102812 -90585042 - MER112 DNA MER1_type -187 73 3 414 335 66 6 chr2 160102936 160103103 -90584751 + MIR SINE MIR 3 179 -83 449 334 71 96 chr2 160103113 160103988 -90583866 + L2 LINE L2 2430 3268 -4 476 313 40 27 chr2 160104606 160104756 -90583098 + L2 LINE L2 3121 3272 0 8134 163 21 11 chr2 160104775 160107038 -90580816 + L1PA14 LINE L1 3865 6133 -28 1939 117 73 31 chr2 160107038 160107396 -90580458 - THE1C LTR MaLR 0 375 3 8134 163 21 11 chr2 160107396 160107416 -90580438 + L1PA14 LINE L1 6133 6151 -10 31 58 0 0 chr2 160107905 160107957 -90579897 + AT_rich Low_complexity Low_complexity 1 52 0 29 47 0 0 chr2 160108425 160108468 -90579386 + AT_rich Low_complexity Low_complexity 1 43 0 622 325 135 18 chr2 160110256 160110699 -90577155 + L2 LINE L2 2263 2757 -557 662 209 15 135 chr2 160110709 160110968 -90576886 - MER102a DNA MER1_type 0 330 103 2404 96 11 14 chr2 160111016 160111381 -90576473 - L1PB1 LINE L1 -4 6147 5784 210 37 0 0 chr2 160111381 160111408 -90576446 + (TG)n Simple_repeat Simple_repeat 2 28 0 254 259 0 0 chr2 160111416 160111501 -90576353 - L1MC4 LINE L1 -1339 6703 6619 * 264 245 21 21 chr2 160111431 160111525 -90576329 + L1MC4 LINE L1 6615 6708 -1334 1524 169 66 29 chr2 160112153 160112502 -90575352 - L1M2 LINE L1 -578 5734 5373 197 309 83 0 chr2 160113443 160113527 -90574327 + L2 LINE L2 3012 3102 -170 184 371 9 29 chr2 160113592 160113697 -90574157 + L2 LINE L2 3179 3281 -32 2282 194 38 6 chr2 160113905 160114374 -90573480 - L1ME1 LINE L1 -203 5963 5480 1949 159 55 17 chr2 160114562 160114965 -90572889 - L1MA9 LINE L1 -1 6311 5894 2066 205 82 29 chr2 160115987 160116508 -90571346 + MER44D DNA MER2_type 1 604 -1 728 152 0 0 chr2 160117568 160117693 -90570161 + L1MA7 LINE L1 6162 6286 -5 431 230 23 11 chr2 160118872 160118959 -90568895 + MER5A DNA MER1_type 4 91 -98 1247 271 49 3 chr2 160119043 160119409 -90568445 + MER20B DNA MER1_type 398 780 -3 436 327 19 43 chr2 160119415 160119626 -90568228 - L2 LINE L2 -556 2758 2553 308 286 91 31 chr2 160119881 160120052 -90567802 + MIR SINE MIR 33 212 -50 2205 106 0 10 chr2 160120868 160121171 -90566683 + AluSx SINE Alu 10 309 -3 579 68 0 0 chr2 160121191 160121298 -90566556 + AluSg/x SINE Alu 206 312 0 248 246 174 0 chr2 160121712 160121781 -90566073 - MIR3 SINE MIR -9 199 119 202 181 0 169 chr2 160121868 160121951 -90565903 + MER91B DNA MER1_type 10 78 -112 525 304 26 60 chr2 160122182 160122292 -90565562 - MIR SINE MIR 0 262 150 2232 67 0 0 chr2 160122292 160122560 -90565294 - AluY SINE Alu -7 304 37 525 304 26 60 chr2 160122560 160122715 -90565139 - MIR SINE MIR -112 150 6 41233 48 6 2 chr2 160122839 160128035 -90559819 + L1P LINE L1 4 5221 -925 204 244 6 67 chr2 160128084 160128248 -90559606 + A-rich Low_complexity Low_complexity 6 159 0 193 288 113 73 chr2 160178393 160178570 -90509284 + MIR SINE MIR 33 216 -46 234 0 0 0 chr2 160179337 160179363 -90508491 + (T)n Simple_repeat Simple_repeat 1 26 0 319 204 23 0 chr2 160181146 160181234 -90506620 + L1ME2 LINE L1 4157 4246 -1900 332 284 12 0 chr2 160181243 160181324 -90506530 + MER58 DNA MER1_type 10 91 -2329 1739 231 62 38 chr2 160181340 160181941 -90505913 + L1ME2 LINE L1 5541 6155 -9 26 0 0 0 chr2 160183652 160183678 -90504176 + AT_rich Low_complexity Low_complexity 1 26 0 403 159 262 0 chr2 160184604 160184711 -90503143 - L1ME1 LINE L1 -6 6160 6026 1490 243 94 19 chr2 160186190 160186660 -90501194 + MLT1D LTR MaLR 1 505 0 1082 160 8 5 chr2 160186660 160186901 -90500953 + MLT1D-int LTR MaLR 1 356 -1015 1061 97 49 80 chr2 160186904 160187130 -90500724 - Tigger1 DNA MER2_type 0 2418 2200 663 221 0 7 chr2 160187128 160187264 -90500590 - Tigger1 DNA MER2_type -2281 137 3 * 2880 214 71 92 chr2 160187269 160188277 -90499577 + MLT1D-int LTR MaLR 361 1347 -24 281 302 96 55 chr2 160188331 160188693 -90499161 + L2 LINE L2 452 928 -2386 2455 68 0 0 chr2 160188693 160188988 -90498866 - AluY SINE Alu -16 295 1 281 302 96 55 chr2 160188988 160189048 -90498806 + L2 LINE L2 928 984 -2330 201 247 86 49 chr2 160190886 160190967 -90496887 + L3 LINE CR1 1486 1569 -8 411 314 145 0 chr2 160191244 160191403 -90496451 + MIR SINE MIR 10 191 -71 270 352 31 38 chr2 160192143 160192302 -90495552 - L2 LINE L2 -961 2353 2196 194 300 25 75 chr2 160192396 160192516 -90495338 + MIR SINE MIR 128 241 -21 355 315 81 34 chr2 160192619 160193003 -90494851 - L2 LINE L2 -1201 2113 1712 2275 99 0 0 chr2 160194138 160194430 -90493424 - AluSx SINE Alu -20 292 1 30 0 0 0 chr2 160194928 160194958 -90492896 + AT_rich Low_complexity Low_complexity 1 30 0 501 285 87 17 chr2 160194993 160195165 -90492689 - MIR SINE MIR -51 211 28 1498 155 40 40 chr2 160195249 160195572 -90492282 + MER58B DNA MER1_type 19 341 0 1434 50 75 5 chr2 160196057 160196256 -90491598 - L1PA6 LINE L1 -1 6153 5941 2124 117 117 18 chr2 160196522 160196917 -90490937 + L1MB3 LINE L1 5747 6180 -3 21 0 0 0 chr2 160197130 160197151 -90490703 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 160197508 160197543 -90490311 + AT_rich Low_complexity Low_complexity 1 35 0 344 304 159 24 chr2 160197723 160198101 -90489753 - L1MC4a LINE L1 -1920 5888 5460 32 57 0 0 chr2 160198371 160198424 -90489430 + AT_rich Low_complexity Low_complexity 1 53 0 661 260 88 37 chr2 160198614 160199030 -90488824 - L1MC/D LINE L1 -459 5662 5375 248 178 79 26 chr2 160199303 160199370 -90488484 + MIR SINE MIR 51 121 -94 237 178 0 0 chr2 160199676 160199721 -90488133 + T-rich Low_complexity Low_complexity 1 45 0 23 33 0 0 chr2 160200729 160200759 -90487095 + AT_rich Low_complexity Low_complexity 1 30 0 214 342 195 13 chr2 160201532 160201681 -90486173 - L2 LINE L2 -340 2974 2799 199 323 255 5 chr2 160201743 160201935 -90485919 + MIR SINE MIR 9 248 -14 600 142 277 65 chr2 160202253 160202316 -90485538 - MER5A DNA MER1_type 0 189 141 2198 100 3 17 chr2 160202316 160202617 -90485237 + AluSq SINE Alu 1 297 -16 600 142 277 65 chr2 160202617 160202708 -90485146 - MER5A DNA MER1_type -48 141 2 2028 119 4 0 chr2 160202968 160203245 -90484609 + AluSx SINE Alu 14 291 -21 537 235 27 7 chr2 160204015 160204164 -90483690 + MER103 DNA DNA 14 165 -1 367 282 14 150 chr2 160205707 160205987 -90481867 - L2 LINE L2 -2829 485 244 253 274 89 12 chr2 160206390 160206558 -90481296 + L1MEd LINE L1 895 1075 -5044 958 288 57 58 chr2 160206988 160207567 -90480287 + L1ME2 LINE L1 5366 5882 -282 23 54 0 0 chr2 160207715 160207752 -90480102 + AT_rich Low_complexity Low_complexity 1 37 0 247 271 37 9 chr2 160207768 160207875 -90479979 + L1MC4 LINE L1 7929 8038 -4 426 266 128 18 chr2 160207937 160208233 -90479621 - LTR16A LTR ERVL 0 450 77 531 290 20 30 chr2 160209225 160209425 -90478429 - LTR67 LTR ERVL -4 553 356 497 348 44 23 chr2 160212982 160213324 -90474530 + L1MEd LINE L1 4 352 -5767 246 256 51 26 chr2 160213337 160213415 -90474439 + L1MEd LINE L1 475 554 -5565 1287 119 0 10 chr2 160213472 160213665 -90474189 + L1M3e LINE L1 1 191 -6839 232 258 40 96 chr2 160213830 160214028 -90473826 + L1ME LINE L1 5665 5851 -319 186 128 0 0 chr2 160214108 160214147 -90473707 + (TA)n Simple_repeat Simple_repeat 2 40 0 184 215 13 89 chr2 160215199 160215278 -90472576 + L2 LINE L2 3198 3270 -2 379 168 39 136 chr2 160217784 160217939 -90469915 - L1MB7 LINE L1 -12 6172 6033 30 0 0 0 chr2 160217976 160218006 -90469848 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr2 160218113 160218148 -90469706 + AT_rich Low_complexity Low_complexity 1 35 0 866 151 0 0 chr2 160218803 160218929 -90468925 + FLAM_C SINE Alu 1 126 -17 27 49 0 0 chr2 160219257 160219298 -90468556 + AT_rich Low_complexity Low_complexity 1 41 0 2261 177 23 8 chr2 160220011 160220486 -90467368 - L1MB7 LINE L1 0 6184 5703 24 0 0 0 chr2 160221620 160221644 -90466210 + AT_rich Low_complexity Low_complexity 1 24 0 35 24 0 0 chr2 160221980 160222022 -90465832 + AT_rich Low_complexity Low_complexity 1 42 0 408 269 134 77 chr2 160222254 160222797 -90465057 - L1ME3 LINE L1 -300 5862 5289 416 19 19 0 chr2 160224576 160224629 -90463225 + (TG)n Simple_repeat Simple_repeat 2 55 0 1268 257 75 35 chr2 160225086 160225831 -90462023 + L1MC5 LINE L1 7233 7911 -50 26 64 0 0 chr2 160226838 160226885 -90460969 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 0 chr2 160227346 160227369 -90460485 + AT_rich Low_complexity Low_complexity 1 23 0 243 121 0 0 chr2 160230828 160230861 -90456993 + Alu SINE Alu 3 35 -267 * 284 189 0 0 chr2 160230856 160230909 -90456945 + FAM SINE Alu 126 178 -1 314 275 38 0 chr2 160231382 160231462 -90456392 + L2 LINE L2 3227 3309 -4 1562 168 9 63 chr2 160232071 160232387 -90455467 - AluJo SINE Alu -13 299 1 2391 54 7 7 chr2 160232750 160233044 -90454810 + AluY SINE Alu 2 295 -16 328 327 57 42 chr2 160233304 160233567 -90454287 - L2 LINE L2 -491 2823 2557 283 308 65 28 chr2 160233578 160233685 -90454169 - L2 LINE L2 -25 3247 3137 564 277 7 19 chr2 160233886 160234041 -90453813 - LTR67 LTR ERVL -3 554 402 184 191 0 71 chr2 160234666 160234708 -90453146 + L2 LINE L2 3218 3256 -16 21 36 0 0 chr2 160235048 160235076 -90452778 + AT_rich Low_complexity Low_complexity 1 28 0 376 238 12 12 chr2 160235353 160235437 -90452417 - L2 LINE L2 -19 3253 3170 293 293 253 35 chr2 160236462 160236660 -90451194 + MIR SINE MIR 7 247 -15 342 260 16 79 chr2 160237929 160238056 -90449798 - L2 LINE L2 -5 3308 3190 198 341 106 32 chr2 160238560 160238806 -90449048 - L2 LINE L2 -456 2858 2595 180 326 0 0 chr2 160239338 160239387 -90448467 + L2 LINE L2 3168 3216 -56 2865 169 77 12 chr2 160239892 160240489 -90447365 - L1MB8 LINE L1 -5 6173 5538 805 111 0 0 chr2 160240507 160240624 -90447230 + AluY SINE Alu 187 303 -8 413 125 88 0 chr2 160240628 160240719 -90447135 - L1MB8 LINE L1 -644 5526 5426 254 239 55 55 chr2 160240769 160240878 -90446976 - L1ME4a LINE L1 0 6121 6013 700 281 47 4 chr2 160241203 160241456 -90446398 - L1ME4a LINE L1 -348 5773 5510 820 284 87 38 chr2 160241601 160241967 -90445887 - LTR33A LTR ERVL -2 521 138 1450 133 39 0 chr2 160242214 160242470 -90445384 + L1MA2 LINE L1 6039 6304 0 2023 139 0 10 chr2 160243065 160243374 -90444480 - AluSx SINE Alu 0 312 7 23 0 0 0 chr2 160245709 160245732 -90442122 + AT_rich Low_complexity Low_complexity 1 23 0 200 189 0 0 chr2 160246362 160246399 -90441455 + (CA)n Simple_repeat Simple_repeat 2 38 0 540 292 129 20 chr2 160246503 160246852 -90441002 - L1MC4a LINE L1 -1884 5924 5538 508 230 40 17 chr2 160247323 160247497 -90440357 + MER5B DNA MER1_type 1 178 0 525 234 65 37 chr2 160247499 160247713 -90440141 + L1MC5 LINE L1 7009 7228 -733 717 247 5 75 chr2 160247723 160247909 -90439945 + MER5B DNA MER1_type 6 178 0 260 236 67 0 chr2 160248382 160248471 -90439383 + L1MC5 LINE L1 7680 7774 -187 21 36 0 0 chr2 160249845 160249873 -90437981 + AT_rich Low_complexity Low_complexity 1 28 0 188 194 0 0 chr2 160249988 160250019 -90437835 - MIR SINE MIR -202 60 30 2034 132 31 0 chr2 160252164 160252452 -90435402 + AluSx SINE Alu 1 297 -15 586 205 63 24 chr2 160253958 160254085 -90433769 - L2 LINE L2 0 3313 3182 194 275 0 0 chr2 160254144 160254184 -90433670 + L2 LINE L2 3019 3058 -214 213 39 0 0 chr2 160254194 160254220 -90433634 + (CA)n Simple_repeat Simple_repeat 2 27 0 2537 67 0 0 chr2 160255727 160256039 -90431815 + AluSx SINE Alu 1 312 0 1622 171 0 38 chr2 160257453 160257746 -90430108 - AluJo SINE Alu -30 282 1 858 243 143 53 chr2 160260556 160261103 -90426751 - L1MC4a LINE L1 -1899 5909 5314 21 0 0 0 chr2 160262032 160262053 -90425801 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 160262210 160262236 -90425618 + AT_rich Low_complexity Low_complexity 1 26 0 2459 75 0 0 chr2 160262236 160262542 -90425312 - AluSc SINE Alu -3 306 1 262 326 118 0 chr2 160263604 160263748 -90424106 + MIR3 SINE MIR 46 206 -2 1804 118 0 76 chr2 160263981 160264295 -90423559 - AluSg1 SINE Alu -19 290 1 2352 53 0 11 chr2 160265190 160265502 -90422352 - AluY SINE Alu 0 310 2 1694 161 3 28 chr2 160265653 160265939 -90421915 - AluJo SINE Alu -18 294 16 1185 148 0 0 chr2 160267402 160267591 -90420263 - Tigger7 DNA MER2_type -1 2486 2298 * 1875 175 16 6 chr2 160267587 160267902 -90419952 - Tigger7 DNA MER2_type -415 318 1 2001 305 76 38 chr2 160270396 160272069 -90415785 - L1MEc LINE L1 -4626 1770 35 503 299 39 39 chr2 160272553 160272764 -90415090 - MIR SINE MIR -50 212 3 433 265 157 60 chr2 160272847 160273115 -90414739 - L2 LINE L2 -597 2717 2424 359 260 47 16 chr2 160273319 160273446 -90414408 + MIR SINE MIR 118 248 -14 309 89 0 0 chr2 160273585 160273630 -90414224 + (TG)n Simple_repeat Simple_repeat 1 45 0 436 297 282 0 chr2 160274041 160274243 -90413611 + MIR SINE MIR 4 262 0 2050 120 21 3 chr2 160275318 160275609 -90412245 + AluSx SINE Alu 1 296 -16 2055 117 0 7 chr2 160276306 160276587 -90411267 - AluSx SINE Alu -33 279 1 210 266 63 38 chr2 160277350 160277429 -90410425 - L2 LINE L2 -25 3288 3208 1857 164 3 10 chr2 160277692 160278002 -90409852 + AluJo SINE Alu 1 308 -4 2161 118 0 0 chr2 160278041 160278329 -90409525 - AluSx SINE Alu -24 288 1 23 0 0 0 chr2 160279168 160279191 -90408663 + AT_rich Low_complexity Low_complexity 1 23 0 416 300 31 0 chr2 160280989 160281119 -90406735 - L3 LINE CR1 -18 1559 1426 2033 122 17 0 chr2 160282980 160283268 -90404586 + AluSx SINE Alu 1 293 -19 263 240 53 27 chr2 160283423 160283498 -90404356 - MIR3 SINE MIR -24 184 108 995 191 187 0 chr2 160286292 160286565 -90401289 - MER33 DNA MER1_type 0 324 1 186 143 29 0 chr2 160289121 160289156 -90398698 - L2 LINE L2 -13 3300 3265 248 226 81 0 chr2 160289361 160289423 -90398431 + MIR SINE MIR 189 255 -7 373 228 132 22 chr2 160293236 160293372 -90394482 + MIR SINE MIR 107 257 -5 938 291 163 22 chr2 160293711 160294749 -90393105 - L2 LINE L2 -70 3243 2005 499 196 0 0 chr2 160295212 160295319 -90392535 - MIR SINE MIR -38 224 118 304 262 12 0 chr2 160299036 160299120 -90388734 + MIR SINE MIR 111 195 -67 198 0 0 0 chr2 160299451 160299473 -90388381 + (GGCTG)n Simple_repeat Simple_repeat 5 26 0 662 263 6 0 chr2 160301306 160301462 -90386392 + MER96 DNA MER1_type? 1 157 -18 209 279 13 38 chr2 160301846 160301925 -90385929 + MIR SINE MIR 152 228 -34 2204 141 22 14 chr2 160304423 160304785 -90383069 - MLT1A1 LTR MaLR 0 365 1 298 263 42 53 chr2 160305351 160305446 -90382408 + L2 LINE L2 3213 3306 -7 21 71 0 0 chr2 160305588 160305630 -90382224 + AT_rich Low_complexity Low_complexity 1 42 0 658 314 52 29 chr2 160305872 160306315 -90381539 - L2 LINE L2 -5 3308 2856 378 198 23 5 chr2 160306443 160306579 -90381275 - L2 LINE L2 -1366 1948 1751 1441 117 40 5 chr2 160309475 160309697 -90378157 - MER30 DNA MER1_type 0 230 1 183 42 0 0 chr2 160311324 160311348 -90376506 + (TATG)n Simple_repeat Simple_repeat 3 26 0 296 271 84 9 chr2 160317375 160317482 -90370372 + MER5B DNA MER1_type 63 177 -1 299 232 167 54 chr2 160317806 160317974 -90369880 - MIR SINE MIR -7 255 69 226 96 96 39 chr2 160318079 160318131 -90369723 + MER113 DNA MER1_type? 136 190 -331 1204 139 0 0 chr2 160318224 160318390 -90369464 + FRAM SINE Alu 1 161 -15 252 235 0 44 chr2 160318391 160318459 -90369395 + MER113 DNA MER1_type? 453 517 -4 1228 158 157 92 chr2 160318715 160319110 -90368744 + L1ME2 LINE L1 5679 6110 -54 2221 110 10 0 chr2 160319110 160319411 -90368443 + AluSq SINE Alu 1 304 -9 1228 158 157 92 chr2 160319411 160319470 -90368384 + L1ME2 LINE L1 6110 6164 0 2162 113 0 20 chr2 160319594 160319896 -90367958 - AluSx SINE Alu -16 296 1 384 242 157 68 chr2 160322277 160322558 -90365296 - MLT1J LTR MaLR -202 309 4 213 0 53 26 chr2 160323451 160323489 -90364365 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 218 289 0 77 chr2 160323559 160323663 -90364191 - MIR SINE MIR 0 262 167 221 321 12 0 chr2 160325186 160325267 -90362587 - MIR SINE MIR -97 165 84 2119 55 51 39 chr2 160325398 160325709 -90362145 - L1PA7 LINE L1 -2 6152 5838 439 168 56 47 chr2 160326157 160326264 -90361590 - MER103 DNA DNA 0 166 59 2038 189 114 6 chr2 160326538 160327010 -90360844 - Charlie1b DNA MER1_type 0 523 1 587 266 176 0 chr2 160327898 160328097 -90359757 + MIR SINE MIR 29 262 0 974 247 109 19 chr2 160328310 160328723 -90359131 - Zaphod DNA AcHobo 0 4031 3582 * 1025 207 60 64 chr2 160328708 160328822 -90359032 - Zaphod DNA AcHobo -3043 988 875 2080 122 27 3 chr2 160328822 160329116 -90358738 - AluSg SINE Alu -9 301 1 1025 207 60 64 chr2 160329116 160329519 -90358335 - Zaphod DNA AcHobo -3156 875 473 5043 126 14 40 chr2 160329524 160330037 -90357817 + L1MB2 LINE L1 5311 5793 -378 1861 176 0 0 chr2 160330037 160330327 -90357527 + AluJb SINE Alu 1 290 -22 5043 126 14 40 chr2 160330327 160330696 -90357158 + L1MB2 LINE L1 5793 6170 -1 3668 234 62 12 chr2 160330813 160331853 -90356001 + L1MC/D LINE L1 3949 5039 -1107 570 164 16 47 chr2 160331853 160331981 -90355873 + AluJb SINE Alu 189 312 0 2579 145 61 91 chr2 160331981 160332258 -90355596 + L1MC/D LINE L1 5049 5333 -1000 3001 95 2 0 chr2 160332258 160332667 -90355187 + L1PA8 LINE L1 5749 6158 -14 2579 145 61 91 chr2 160332667 160333150 -90354704 + L1MC/D LINE L1 5333 5809 -524 21 0 0 0 chr2 160333180 160333201 -90354653 + AT_rich Low_complexity Low_complexity 1 21 0 334 230 58 0 chr2 160333260 160333347 -90354507 - ERVL LTR ERVL -1909 3855 3764 255 57 0 57 chr2 160333416 160333469 -90354385 + (GGA)n Simple_repeat Simple_repeat 3 52 0 906 284 105 14 chr2 160333485 160333855 -90353999 - Zaphod DNA AcHobo -3537 494 91 410 53 18 0 chr2 160333857 160333914 -90353940 + (TG)n Simple_repeat Simple_repeat 1 58 0 1431 172 72 48 chr2 160334041 160334265 -90353589 + MER44D DNA MER2_type 1 218 -2273 5022 153 33 12 chr2 160334265 160335112 -90352742 + MER6 DNA MER2_type 1 865 0 1431 172 72 48 chr2 160335112 160335218 -90352636 + MER44D DNA MER2_type 218 609 0 435 96 36 0 chr2 160335931 160336014 -90351840 + CT-rich Low_complexity Low_complexity 1 86 0 1901 165 38 22 chr2 160336145 160336514 -90351340 - THE1C LTR MaLR 0 375 1 511 224 118 35 chr2 160336610 160336726 -90351128 + MER20 DNA MER1_type 36 172 -47 419 0 20 0 chr2 160336726 160336777 -90351077 + (TAA)n Simple_repeat Simple_repeat 2 53 0 511 224 118 35 chr2 160336777 160336830 -90351024 + MER20 DNA MER1_type 172 219 0 926 210 149 14 chr2 160336876 160337152 -90350702 - MLT1C LTR MaLR 0 467 155 485 215 92 61 chr2 160337972 160338135 -90349719 - MLT1C LTR MaLR -299 168 1 1468 263 135 2 chr2 160338446 160338963 -90348891 + MLT1G LTR MaLR 3 588 -2 1733 128 50 61 chr2 160339007 160339439 -90348415 + THE1C LTR MaLR 1 375 0 313 326 41 0 chr2 160339541 160339688 -90348166 - MIR SINE MIR -9 253 101 4122 110 35 74 chr2 160339849 160340567 -90347287 - LTR8 LTR ERV1 0 691 2 3825 175 82 13 chr2 160341015 160341414 -90346440 + L1MCa LINE L1 19 389 -6037 225 0 0 0 chr2 160341414 160341439 -90346415 + (CA)n Simple_repeat Simple_repeat 2 26 0 3825 175 82 13 chr2 160341439 160341793 -90346061 + L1MCa LINE L1 389 824 -5602 390 143 231 0 chr2 160341795 160341886 -90345968 - MER1B DNA MER1_type -185 112 1 255 354 139 0 chr2 160342126 160342284 -90345570 - MIR SINE MIR -79 183 4 3626 152 106 52 chr2 160342426 160342932 -90344922 - L1MD1 LINE L1 0 6242 5676 1517 159 47 29 chr2 160342932 160343248 -90344606 - AluJb SINE Alu 0 321 1 3626 152 106 52 chr2 160343248 160343511 -90344343 - L1MD1 LINE L1 -566 5676 5429 * 4526 234 21 47 chr2 160343481 160343699 -90344155 - L1MDa LINE L1 -2458 4082 3860 1933 130 18 0 chr2 160343699 160344001 -90343853 - AluSx SINE Alu 0 307 1 4526 234 21 47 chr2 160344001 160344836 -90343018 - L1MDa LINE L1 -2680 3860 3005 2163 123 13 13 chr2 160344836 160345146 -90342708 - AluSx SINE Alu -2 310 1 4526 234 21 47 chr2 160345146 160345246 -90342608 - L1MDa LINE L1 -3535 3005 2904 1536 173 3 69 chr2 160345246 160345564 -90342290 - AluJb SINE Alu -15 297 1 4526 234 21 47 chr2 160345564 160345861 -90341993 - L1MDa LINE L1 -3636 2904 2666 3973 166 4 36 chr2 160345862 160346587 -90341267 - L1MB3 LINE L1 -36 6147 5446 10037 192 108 20 chr2 160346588 160346887 -90340967 - L1MDa LINE L1 -3858 2682 2411 2105 139 10 0 chr2 160346887 160347196 -90340658 - AluSx SINE Alu 0 312 1 10037 192 108 20 chr2 160347196 160349347 -90338507 - L1MDa LINE L1 -4129 2411 18 423 291 80 7 chr2 160349537 160349688 -90338166 - MER103 DNA DNA -3 163 2 25 0 0 0 chr2 160350229 160350254 -90337600 + AT_rich Low_complexity Low_complexity 1 25 0 348 250 230 0 chr2 160351458 160351610 -90336244 + MIR3 SINE MIR 13 199 -9 400 243 81 22 chr2 160351802 160351938 -90335916 + MIR SINE MIR 13 156 -106 357 346 13 26 chr2 160352812 160352965 -90334889 + MIR SINE MIR 103 253 -9 289 228 101 13 chr2 160352995 160353074 -90334780 + L2 LINE L2 3123 3208 -64 362 228 96 52 chr2 160353132 160353268 -90334586 - MLT1H LTR MaLR -3 546 405 1078 176 80 50 chr2 160353356 160353594 -90334260 - MLT1H LTR MaLR -304 245 1 331 268 84 101 chr2 160355301 160355480 -90332374 - MER5A DNA MER1_type -5 184 9 1291 193 137 117 chr2 160355550 160355611 -90332243 - MLT1D LTR MaLR -7 498 440 2675 179 11 4 chr2 160355611 160356081 -90331773 + L1MB3 LINE L1 5704 6176 -7 1291 193 137 117 chr2 160356081 160356507 -90331347 - MLT1D LTR MaLR -65 440 1 273 364 45 0 chr2 160356915 160357069 -90330785 - MIR SINE MIR -21 241 81 239 247 49 25 chr2 160357103 160357184 -90330670 + MIR SINE MIR 15 97 -165 504 270 38 49 chr2 160359548 160359733 -90328121 + MIR SINE MIR 28 210 -52 411 286 62 31 chr2 160361768 160361929 -90325925 + MIR SINE MIR 22 187 -75 430 289 111 45 chr2 160361944 160362276 -90325578 - MLT1K LTR MaLR -68 520 167 949 296 108 41 chr2 160362278 160362981 -90324873 - L2 LINE L2 0 3313 2532 337 320 61 20 chr2 160363230 160363377 -90324477 - MIR3 SINE MIR -32 176 24 301 353 93 43 chr2 160366357 160366657 -90321197 + L2 LINE L2 2921 3235 -37 488 219 65 32 chr2 160366726 160366881 -90320973 - MER5A DNA MER1_type 0 189 30 1282 207 26 16 chr2 160367107 160367456 -90320398 + HsTC2 DNA Tc2 1 406 -1492 457 271 179 0 chr2 160367484 160367635 -90320219 + MER5A DNA MER1_type 9 186 -3 569 211 10 0 chr2 160367637 160367741 -90320113 + HsTC2 DNA Tc2 409 513 -1385 1131 216 123 33 chr2 160367742 160368141 -90319713 + HsTC2 DNA Tc2 1287 1897 -1 2336 107 0 3 chr2 160368283 160368480 -90319374 - AluSx SINE Alu -4 308 111 219 69 0 0 chr2 160368480 160368509 -90319345 + (CGGGG)n Simple_repeat Simple_repeat 1 29 0 2336 107 0 3 chr2 160368509 160368620 -90319234 - AluSx SINE Alu -201 111 1 332 312 74 53 chr2 160368896 160369069 -90318785 - MIR SINE MIR -51 157 17 784 214 18 6 chr2 160369592 160369760 -90318094 + MER5B DNA MER1_type 2 171 -7 1987 124 10 23 chr2 160369852 160370159 -90317695 + AluSx SINE Alu 1 303 -9 277 287 24 86 chr2 160370208 160370417 -90317437 - L1ME4a LINE L1 -1 6120 5925 450 294 8 8 chr2 160371989 160372115 -90315739 - L2 LINE L2 0 3313 3188 23 33 0 0 chr2 160372510 160372540 -90315314 + AT_rich Low_complexity Low_complexity 1 30 0 409 264 45 9 chr2 160373126 160373236 -90314618 - L2 LINE L2 0 3272 3159 1304 142 87 14 chr2 160373340 160373559 -90314295 + MER46A DNA MER2_type 1 235 -1 238 260 124 65 chr2 160373635 160373804 -90314050 - Charlie7 DNA MER1_type -1923 689 511 825 234 87 26 chr2 160373850 160374237 -90313617 - Charlie7 DNA MER1_type -2095 517 36 321 312 143 25 chr2 160376632 160376866 -90310988 + MIR SINE MIR 3 262 0 457 270 58 87 chr2 160377081 160377392 -90310462 + Charlie8 DNA MER1_type 26 327 -2090 446 290 99 6 chr2 160377505 160377667 -90310187 + MIR SINE MIR 27 203 -59 264 238 0 0 chr2 160377738 160377822 -90310032 + (CTA)n Simple_repeat Simple_repeat 2 85 0 7214 71 24 4 chr2 160378176 160382651 -90305203 + L1PA6 LINE L1 1591 6154 0 184 136 45 45 chr2 160383848 160383892 -90303962 - MIR SINE MIR -138 70 27 209 196 22 0 chr2 160384298 160384344 -90303510 + (CA)n Simple_repeat Simple_repeat 1 47 0 216 111 0 0 chr2 160384633 160384669 -90303185 + (CA)n Simple_repeat Simple_repeat 2 37 0 672 261 28 37 chr2 160384882 160385100 -90302754 + MIR SINE MIR 46 261 -1 269 237 0 0 chr2 160385120 160385179 -90302675 + MER94 DNA DNA 6 64 -70 27 29 0 0 chr2 160385619 160385653 -90302201 + AT_rich Low_complexity Low_complexity 1 34 0 338 276 158 9 chr2 160385993 160386221 -90301633 + L1MC4a LINE L1 5914 6175 -1633 249 384 0 16 chr2 160386935 160387060 -90300794 + 7SK RNA RNA 1 123 -70 240 341 152 15 chr2 160387261 160387393 -90300461 + MER91A DNA MER1_type 38 187 -9 1952 176 0 0 chr2 160387556 160387868 -90299986 - AluJb SINE Alu 0 312 1 211 236 14 28 chr2 160387948 160388020 -90299834 + CT-rich Low_complexity Low_complexity 2 72 0 3429 140 92 63 chr2 160389030 160390011 -90297843 - L1MA9 LINE L1 -1 6311 5266 22 35 0 0 chr2 160390019 160390048 -90297806 + AT_rich Low_complexity Low_complexity 1 29 0 5064 89 0 0 chr2 160390066 160390707 -90297147 + THE1B-int LTR MaLR 940 1580 0 2130 115 80 37 chr2 160390707 160391056 -90296798 + THE1B LTR MaLR 1 364 0 2772 274 75 12 chr2 160391071 160392828 -90295026 - L1 LINE L1 -3771 3794 2209 514 285 78 54 chr2 160392932 160393356 -90294498 - L1 LINE L1 -6734 832 399 216 343 0 0 chr2 160393428 160393501 -90294353 + MER5A DNA MER1_type 60 132 -57 387 0 0 0 chr2 160393772 160393815 -90294039 + (TTA)n Simple_repeat Simple_repeat 3 45 0 1067 32 0 0 chr2 160393815 160393938 -90293916 - L1PA3 LINE L1 -18 6137 6015 210 352 38 38 chr2 160394413 160394518 -90293336 - L2 LINE L2 -8 3264 3160 712 224 107 15 chr2 160394577 160394782 -90293072 - MER58A DNA MER1_type 0 224 1 593 43 97 11 chr2 160395442 160395535 -90292319 + L1PA4 LINE L1 6053 6153 -2 462 279 8 115 chr2 160395538 160395782 -90292072 - MIR SINE MIR -27 235 18 2042 139 142 18 chr2 160396025 160396406 -90291448 - MSTA LTR MaLR 0 428 1 2166 124 30 3 chr2 160396406 160396770 -90291084 - MSTA-int LTR MaLR 0 1651 1278 * 4918 168 68 10 chr2 160396759 160397768 -90290086 - MSTA-int LTR MaLR -510 1070 3 2177 138 138 5 chr2 160397770 160398148 -90289706 - MSTA LTR MaLR 0 428 1 1250 257 54 34 chr2 160398255 160398702 -90289152 + LTR16B LTR ERVL 1 456 -8 23 78 0 0 chr2 160398937 160398988 -90288866 + AT_rich Low_complexity Low_complexity 1 51 0 565 294 12 12 chr2 160399094 160399254 -90288600 + MIR3 SINE MIR 48 207 -1 737 286 156 31 chr2 160399417 160399808 -90288046 + L2 LINE L2 2874 3313 0 538 266 108 0 chr2 160400433 160400591 -90287263 + MIR SINE MIR 58 232 -30 27903 56 10 2 chr2 160401077 160405673 -90282181 + L1PA5 LINE L1 1521 6152 -2 22 0 0 0 chr2 160406562 160406584 -90281270 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr2 160408006 160408039 -90279815 + AT_rich Low_complexity Low_complexity 1 33 0 1185 314 79 80 chr2 160408383 160408535 -90279319 - L2 LINE L2 -221 3051 2900 1740 196 3 3 chr2 160408535 160408826 -90279028 + AluJb SINE Alu 3 293 -19 1185 314 79 80 chr2 160408826 160409518 -90278336 - L2 LINE L2 -372 2900 2209 5916 50 0 0 chr2 160409518 160410244 -90277610 + L1PA5 LINE L1 5429 6154 0 1185 314 79 80 chr2 160410244 160410306 -90277548 - L2 LINE L2 -1063 2209 2148 396 0 0 0 chr2 160410306 160410350 -90277504 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 1185 314 79 80 chr2 160410350 160410533 -90277321 - L2 LINE L2 -1124 2148 1965 755 336 64 27 chr2 160410621 160411398 -90276456 + L1MEc LINE L1 35 840 -5556 1041 176 70 4 chr2 160411447 160411691 -90276163 + L1MA4 LINE L1 6030 6289 -11 772 256 56 77 chr2 160411704 160412601 -90275253 + L1MEc LINE L1 862 1741 -4655 1745 153 43 7 chr2 160412601 160412882 -90274972 + AluSx SINE Alu 1 291 -21 772 256 56 77 chr2 160412882 160412898 -90274956 + L1MEc LINE L1 1741 1756 -4640 644 263 101 15 chr2 160412921 160413385 -90274469 + L1MEc LINE L1 1906 2409 -3987 588 314 27 6 chr2 160413399 160413737 -90274117 + L1MEc LINE L1 3417 3761 -2454 812 113 0 0 chr2 160413737 160413843 -90274011 + AluSq/x SINE Alu 1 106 -207 1349 226 14 24 chr2 160413901 160414037 -90273817 + AluJb SINE Alu 1 137 -175 180 0 0 0 chr2 160414037 160414057 -90273797 + (TA)n Simple_repeat Simple_repeat 2 21 0 1349 226 14 24 chr2 160414057 160414208 -90273646 + AluJb SINE Alu 137 285 -27 581 199 71 9 chr2 160414216 160414427 -90273427 + L1ME2 LINE L1 5093 5316 -830 38982 66 4 2 chr2 160414447 160420583 -90267271 + L1PA5 LINE L1 1 6153 -1 1665 182 68 68 chr2 160420643 160420819 -90267035 + L1ME2 LINE L1 5317 5492 -672 1509 190 7 34 chr2 160420819 160421114 -90266740 - AluJo SINE Alu -25 287 1 1665 182 68 68 chr2 160421114 160421411 -90266443 + L1ME2 LINE L1 5492 5793 -371 1557 135 122 3 chr2 160421411 160421714 -90266140 - MER44D DNA MER2_type 0 609 1 1665 182 68 68 chr2 160421714 160421755 -90266099 + L1ME2 LINE L1 5792 5832 -332 946 193 18 6 chr2 160421845 160422016 -90265838 + FAM SINE Alu 1 173 -2 685 231 156 0 chr2 160423704 160423890 -90263964 - MIR SINE MIR -21 241 27 243 0 0 0 chr2 160423980 160424007 -90263847 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1556 162 12 96 chr2 160424140 160424474 -90263380 + AluJb SINE Alu 4 309 -3 250 266 31 55 chr2 160424699 160424827 -90263027 - MIR SINE MIR -64 144 20 185 233 23 0 chr2 160425281 160425324 -90262530 + MIR3 SINE MIR 159 202 -6 2010 135 3 16 chr2 160425445 160425756 -90262098 + AluJo SINE Alu 2 308 -4 186 254 42 28 chr2 160426067 160426138 -90261716 - MIR SINE MIR -62 146 75 24 32 0 0 chr2 160426705 160426736 -90261118 + AT_rich Low_complexity Low_complexity 1 31 0 887 247 102 33 chr2 160426802 160427011 -90260843 - Charlie7 DNA MER1_type -265 2347 2154 1848 151 13 23 chr2 160427011 160427310 -90260544 + AluJo SINE Alu 1 296 -16 887 247 102 33 chr2 160427310 160427521 -90260333 - Charlie7 DNA MER1_type -458 2154 1898 22 35 0 0 chr2 160427537 160427566 -90260288 + AT_rich Low_complexity Low_complexity 1 29 0 2260 234 81 30 chr2 160427568 160428100 -90259754 - L1ME1 LINE L1 -5 6397 5894 1658 205 10 0 chr2 160428100 160428407 -90259447 - 7SLRNA srpRNA srpRNA -10 310 1 2260 234 81 30 chr2 160428407 160429286 -90258568 - L1ME1 LINE L1 -508 5894 5062 1913 162 13 0 chr2 160429286 160429589 -90258265 - AluJb SINE Alu -5 307 1 2260 234 81 30 chr2 160429589 160429770 -90258084 - L1ME1 LINE L1 -1340 5062 4892 2258 116 0 0 chr2 160429770 160430071 -90257783 - AluSg SINE Alu -9 301 1 2260 234 81 30 chr2 160430071 160430348 -90257506 - L1ME1 LINE L1 -1510 4892 4314 272 165 58 184 chr2 160430348 160430396 -90257458 - 5S rRNA rRNA -31 90 60 2058 131 7 3 chr2 160430396 160430694 -90257160 - AluSx SINE Alu -13 299 1 272 165 58 184 chr2 160430694 160430748 -90257106 - 5S rRNA rRNA -61 60 1 528 255 35 5 chr2 160430749 160430949 -90256905 - L1ME1 LINE L1 -2065 4317 4112 1867 280 75 12 chr2 160431490 160432355 -90255499 - L1ME1 LINE L1 -4728 1656 737 757 209 114 101 chr2 160432971 160433506 -90254348 - MER34 LTR ERV1 0 542 1 393 299 209 31 chr2 160437739 160438060 -90249794 - L1M2 LINE L1 -5930 919 542 23 92 0 0 chr2 160438253 160438318 -90249536 + GC_rich Low_complexity Low_complexity 1 65 0 293 0 0 26 chr2 160440735 160440773 -90247081 + (CA)n Simple_repeat Simple_repeat 1 37 0 946 230 19 0 chr2 160443662 160443871 -90243983 + MIR SINE MIR 37 249 -13 639 257 76 26 chr2 160444463 160444643 -90243211 + MIR3 SINE MIR 11 201 -7 2143 110 0 27 chr2 160447360 160447659 -90240195 + AluSx SINE Alu 1 291 -21 801 166 13 14 chr2 160448144 160448358 -90239496 - L1MD1 LINE L1 -66 6176 5929 906 179 13 0 chr2 160448359 160448510 -90239344 + AluJb SINE Alu 145 297 -15 1759 197 0 3 chr2 160448513 160448817 -90239037 + AluJo SINE Alu 5 307 -5 1233 204 95 0 chr2 160448817 160449111 -90238743 - L1MD1 LINE L1 -312 5930 5609 21 57 0 0 chr2 160449427 160449462 -90238392 + AT_rich Low_complexity Low_complexity 1 35 0 1944 148 6 28 chr2 160449707 160450024 -90237830 - AluJo SINE Alu -2 310 1 2306 113 0 0 chr2 160450033 160450335 -90237519 - AluSx SINE Alu -10 302 1 278 316 77 93 chr2 160450829 160451152 -90236702 + L2 LINE L2 2955 3272 0 253 262 119 38 chr2 160451471 160451681 -90236173 + L1MCb LINE L1 36 262 -5783 1058 191 59 0 chr2 160452972 160453244 -90234610 + L1MA8 LINE L1 6003 6290 -1 2311 82 0 19 chr2 160453273 160453589 -90234265 + AluY SINE Alu 1 310 -1 6013 98 22 0 chr2 160453806 160454745 -90233109 + L1PA14 LINE L1 5187 6144 -17 21 0 0 0 chr2 160455437 160455458 -90232396 + AT_rich Low_complexity Low_complexity 1 21 0 364 314 109 16 chr2 160455747 160456069 -90231785 - L1MCc LINE L1 -6000 423 72 367 319 44 52 chr2 160456206 160456341 -90231513 + L2 LINE L2 3116 3249 -23 589 268 158 4 chr2 160456597 160456825 -90231029 + LTR16C LTR ERVL 229 491 0 1714 185 14 3 chr2 160457279 160457576 -90230278 - AluJo SINE Alu -12 300 1 307 224 54 48 chr2 160457662 160457809 -90230045 - L1ME4a LINE L1 0 6121 5974 257 396 0 0 chr2 160458120 160458216 -90229638 - MIR3 SINE MIR -6 202 107 948 200 0 6 chr2 160458647 160458812 -90229042 + FAM SINE Alu 4 167 -8 53 34 0 22 chr2 160460143 160460175 -90227679 + AT_rich Low_complexity Low_complexity 1 32 -55 1874 144 34 0 chr2 160460175 160460467 -90227387 - AluJb SINE Alu -10 302 1 53 34 0 22 chr2 160460467 160460523 -90227331 + AT_rich Low_complexity Low_complexity 32 87 0 2188 113 7 3 chr2 160461182 160461482 -90226372 - AluSq SINE Alu -12 301 1 27 62 0 0 chr2 160461583 160461631 -90226223 + AT_rich Low_complexity Low_complexity 1 48 0 1757 157 23 26 chr2 160461655 160461998 -90225856 - L1MB7 LINE L1 -19 6165 5824 885 127 0 45 chr2 160462035 160462169 -90225685 - FLAM_C SINE Alu -15 128 1 2788 132 20 10 chr2 160462169 160462678 -90225176 - L1MB7 LINE L1 -359 5825 5312 824 181 77 11 chr2 160462999 160463181 -90224673 - MER3 DNA MER1_type 0 209 16 182 125 0 25 chr2 160463235 160463275 -90224579 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 682 204 0 0 chr2 160463279 160463392 -90224462 - FLAM_A SINE Alu -19 114 2 1659 192 31 0 chr2 160463500 160463786 -90224068 + AluJo SINE Alu 1 295 -17 2786 19 0 19 chr2 160464968 160465292 -90222562 - AluYb8 SINE Alu 0 318 1 680 270 69 20 chr2 160466145 160466349 -90221505 - MIR SINE MIR 0 262 49 207 347 0 14 chr2 160466479 160466551 -90221303 + L2 LINE L2 3201 3271 -1 24 67 0 0 chr2 160466936 160466981 -90220873 + AT_rich Low_complexity Low_complexity 1 45 0 246 319 31 80 chr2 160468242 160468405 -90219449 - MIR SINE MIR -56 206 52 247 177 32 0 chr2 160468720 160468782 -90219072 + GA-rich Low_complexity Low_complexity 3 66 0 183 167 56 0 chr2 160469179 160469215 -90218639 - L2 LINE L2 -9 3304 3267 374 308 20 14 chr2 160469543 160469689 -90218165 + MLT1E LTR MaLR 1 147 -446 308 236 42 0 chr2 160469918 160469990 -90217864 + MIR3 SINE MIR 89 163 -45 317 324 79 81 chr2 160471852 160472321 -90215533 - L1MB5 LINE L1 -166 6008 5541 266 256 80 25 chr2 160472342 160472541 -90215313 - L1P5 LINE L1 -690 5466 5257 1474 194 6 52 chr2 160472730 160473054 -90214800 - AluJb SINE Alu -3 309 1 29 84 0 0 chr2 160473890 160473961 -90213893 + AT_rich Low_complexity Low_complexity 1 71 0 285 272 99 25 chr2 160473963 160474125 -90213729 - HAL1 LINE L1 -56 2451 2278 374 282 80 41 chr2 160474171 160474533 -90213321 - HAL1 LINE L1 -302 2205 1830 321 281 72 29 chr2 160475672 160475811 -90212043 + MIR SINE MIR 58 202 -60 2211 107 0 3 chr2 160475882 160476180 -90211674 + AluSg SINE Alu 1 297 -13 1982 119 7 0 chr2 160476501 160476826 -90211028 + AluSx SINE Alu 3 329 0 1962 135 3 3 chr2 160476924 160477226 -90210628 - AluSx SINE Alu 0 302 1 23 33 0 0 chr2 160477227 160477257 -90210597 + AT_rich Low_complexity Low_complexity 1 30 0 363 23 0 0 chr2 160477666 160477705 -90210149 + (TG)n Simple_repeat Simple_repeat 1 83 0 363 23 0 0 chr2 160477705 160477749 -90210105 + (TG)n Simple_repeat Simple_repeat 2 45 0 356 185 217 0 chr2 160478098 160478190 -90209664 - MER21B LTR ERV1 -423 440 329 499 294 110 5 chr2 160478503 160478721 -90209133 + MIR SINE MIR 10 250 -12 782 163 31 0 chr2 160479103 160479232 -90208622 - FLAM_A SINE Alu 0 133 1 21 36 0 0 chr2 160484310 160484338 -90203516 + AT_rich Low_complexity Low_complexity 1 28 0 577 202 10 0 chr2 160484743 160484847 -90203007 - MER5A DNA MER1_type 0 189 85 207 0 0 0 chr2 160484911 160484934 -90202920 + (T)n Simple_repeat Simple_repeat 1 23 0 220 236 0 18 chr2 160485237 160485292 -90202562 + L2 LINE L2 3218 3271 -1 2410 81 0 28 chr2 160489020 160489340 -90198514 + AluSq SINE Alu 1 311 -2 2512 63 3 0 chr2 160490611 160490912 -90196942 + AluSp SINE Alu 1 302 -11 2171 113 3 0 chr2 160492050 160492342 -90195512 + AluSx SINE Alu 1 293 -19 376 295 19 19 chr2 160495118 160495223 -90192631 - L2 LINE L2 -7 3265 3161 2336 100 0 0 chr2 160495606 160495897 -90191957 + AluSx SINE Alu 3 293 -19 658 231 0 15 chr2 160496283 160496417 -90191437 + FLAM_A SINE Alu 1 132 -1 1590 200 4 0 chr2 160496719 160496989 -90190865 + AluJo SINE Alu 11 281 -31 381 282 167 6 chr2 160497111 160497267 -90190587 - MER5A DNA MER1_type 0 189 9 2289 101 7 10 chr2 160497599 160497906 -90189948 - AluSq SINE Alu -7 306 1 1502 181 14 14 chr2 160498593 160498881 -90188973 + AluJb SINE Alu 15 302 -10 536 237 109 55 chr2 160498992 160499414 -90188440 - MLT1H LTR MaLR -19 530 14 527 307 189 36 chr2 160499675 160500284 -90187570 - HAL1 LINE L1 -836 1671 970 301 323 129 39 chr2 160501534 160501689 -90186165 - L1ME3A LINE L1 -37 6133 5965 1219 274 77 14 chr2 160501733 160502302 -90185552 - L1ME3A LINE L1 -211 5959 5355 40971 32 21 1 chr2 160503563 160509595 -90178259 + L1PA2 LINE L1 1 6155 0 309 294 59 39 chr2 160509920 160510073 -90177781 - L3 LINE CR1 -13 1564 1409 503 332 207 33 chr2 160510426 160511383 -90176471 - L3 LINE CR1 -418 1159 37 246 62 0 0 chr2 160511442 160511474 -90176380 + (T)n Simple_repeat Simple_repeat 1 32 0 286 220 0 17 chr2 160513309 160513368 -90174486 - L2 LINE L2 0 3272 3215 1576 181 0 37 chr2 160516367 160516666 -90171188 - AluJo SINE Alu -24 288 1 22 0 0 0 chr2 160516667 160516689 -90171165 + AT_rich Low_complexity Low_complexity 1 22 0 566 187 194 14 chr2 160516844 160516983 -90170871 + MIR SINE MIR 78 241 -21 182 309 8 89 chr2 160517880 160518003 -90169851 + L2 LINE L2 3160 3272 0 1911 139 45 7 chr2 160518692 160518980 -90168874 + AluJb SINE Alu 2 300 -12 2380 101 0 7 chr2 160519480 160519787 -90168067 - AluSx SINE Alu -7 305 1 190 320 0 27 chr2 160520675 160520750 -90167104 - L3 LINE CR1 -900 677 605 23 33 0 0 chr2 160521367 160521397 -90166457 + AT_rich Low_complexity Low_complexity 1 30 0 21 89 0 0 chr2 160522528 160522584 -90165270 + AT_rich Low_complexity Low_complexity 1 56 0 270 193 0 0 chr2 160523716 160523773 -90164081 + (CTA)n Simple_repeat Simple_repeat 3 59 0 255 229 0 0 chr2 160523866 160523914 -90163940 - MIR SINE MIR -2 260 213 300 181 24 48 chr2 160524094 160524177 -90163677 - MER46A DNA MER2_type -43 193 113 284 182 0 0 chr2 160524179 160524234 -90163620 + MER46A DNA MER2_type 97 151 -85 362 293 44 68 chr2 160524815 160525064 -90162790 - MIR SINE MIR 0 262 20 225 0 0 0 chr2 160575212 160575237 -90112617 + (T)n Simple_repeat Simple_repeat 1 25 0 326 197 0 0 chr2 160576467 160576538 -90111316 + L1PB3 LINE L1 6082 6152 -2 27 0 0 0 chr2 160576538 160576565 -90111289 + AT_rich Low_complexity Low_complexity 1 27 0 1840 136 10 7 chr2 160576640 160576941 -90110913 + AluJo SINE Alu 1 302 -10 245 257 28 18 chr2 160577349 160577458 -90110396 + (CA)n Simple_repeat Simple_repeat 1 110 0 3534 123 25 16 chr2 160578482 160579050 -90108804 + MER50 LTR ERV1 1 573 -161 1226 92 0 0 chr2 160579050 160579214 -90108640 - AluSg/x SINE Alu -15 295 132 894 96 103 26 chr2 160579214 160579370 -90108484 + MER50 LTR ERV1 567 734 0 398 280 31 16 chr2 160580283 160580430 -90107424 + MIR SINE MIR 5 153 -67 339 202 61 70 chr2 160580677 160580791 -90107063 - MLT1L LTR MaLR -333 282 170 280 221 88 0 chr2 160580977 160581045 -90106809 + MIR SINE MIR 174 247 -15 1035 190 72 0 chr2 160581443 160581638 -90106216 + MER3 DNA MER1_type 1 209 0 1336 169 72 22 chr2 160583084 160583362 -90104492 - L1MB4 LINE L1 -3 6177 5886 566 175 95 7 chr2 160584245 160584382 -90103472 + MER103 DNA DNA 16 164 -2 637 280 35 19 chr2 160584960 160585217 -90102637 - MIR SINE MIR 0 262 2 904 247 125 55 chr2 160585314 160585698 -90102156 + MLT1J LTR MaLR 101 511 0 186 43 0 0 chr2 160586337 160586360 -90101494 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 304 317 89 44 chr2 160586491 160586671 -90101183 + L1ME3A LINE L1 5982 6169 -1 1858 112 7 44 chr2 160587502 160587683 -90100171 - AluSq SINE Alu 0 305 138 2114 100 0 0 chr2 160587683 160588017 -90099837 - AluY SINE Alu 0 311 1 1858 112 7 44 chr2 160588017 160588151 -90099703 - AluSq SINE Alu -167 138 1 1718 154 0 11 chr2 160588163 160588448 -90099406 - AluJb SINE Alu -25 287 6 3378 195 25 6 chr2 160589405 160590057 -90097797 + L1MB5 LINE L1 5503 6166 -8 308 198 0 11 chr2 160590676 160590746 -90097108 + Alu SINE Alu 1 52 -250 227 279 171 25 chr2 160590899 160591057 -90096797 - L2 LINE L2 -961 2353 2173 303 297 84 88 chr2 160591721 160592017 -90095837 + L1ME4a LINE L1 5813 6107 -14 1956 147 0 10 chr2 160593470 160593777 -90094077 + AluJo SINE Alu 1 304 -8 182 313 132 49 chr2 160594089 160594354 -90093500 + L2 LINE L2 2686 2972 -342 238 277 62 0 chr2 160594522 160594587 -90093267 + L2 LINE L2 3168 3236 -36 870 188 134 21 chr2 160594931 160595249 -90092605 - MSTD LTR MaLR 0 396 38 1316 194 7 25 chr2 160595249 160595527 -90092327 + AluJb SINE Alu 1 273 -39 23 54 0 0 chr2 160595527 160595564 -90092290 + AT_rich Low_complexity Low_complexity 1 37 0 333 83 21 0 chr2 160595569 160595617 -90092237 - MSTD LTR MaLR -347 49 1 250 202 394 10 chr2 160595628 160595727 -90092127 - MER5A DNA MER1_type 0 189 53 1424 159 78 62 chr2 160595727 160596047 -90091807 - MLT1B LTR MaLR 0 390 66 2474 79 7 0 chr2 160596880 160597183 -90090671 + AluSx SINE Alu 1 305 -7 1940 125 40 14 chr2 160597456 160597752 -90090102 - AluSx SINE Alu -8 304 1 759 224 9 75 chr2 160598134 160598362 -90089492 - L1ME LINE L1 -385 5736 5524 492 326 43 5 chr2 160598383 160598567 -90089287 + MIR SINE MIR 23 213 -49 1959 141 0 3 chr2 160598573 160598857 -90088997 + AluJb SINE Alu 1 283 -29 2763 169 31 33 chr2 160599070 160599622 -90088232 - L1MB8 LINE L1 0 6178 5628 257 219 146 0 chr2 160599791 160599873 -90087981 + MIR SINE MIR 169 262 0 204 125 0 0 chr2 160600714 160600746 -90087108 - L2 LINE L2 -5 3308 3277 1127 173 31 87 chr2 160600760 160600888 -90086966 - MLT1C LTR MaLR -188 279 145 1871 146 20 10 chr2 160600888 160601183 -90086671 + AluJo SINE Alu 1 298 -14 1127 173 31 87 chr2 160601183 160601343 -90086511 - MLT1C LTR MaLR -322 145 7 394 229 132 42 chr2 160601348 160601492 -90086362 + MIR SINE MIR 84 240 -22 349 371 112 19 chr2 160601626 160601993 -90085861 + L2 LINE L2 2827 3227 -45 1187 254 148 32 chr2 160601993 160602486 -90085368 + MLT1L LTR MaLR 3 552 -63 272 250 80 11 chr2 160602515 160602603 -90085251 + MLT1L LTR MaLR 521 614 -1 422 200 12 12 chr2 160602776 160602861 -90084993 - MIR SINE MIR -118 144 60 243 0 0 0 chr2 160603573 160603600 -90084254 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 225 65 0 0 chr2 160603889 160603920 -90083934 + (GA)n Simple_repeat Simple_repeat 1 31 0 1532 184 34 10 chr2 160603978 160604272 -90083582 - AluJb SINE Alu -9 303 3 21 36 0 0 chr2 160604297 160604325 -90083529 + AT_rich Low_complexity Low_complexity 1 28 0 461 124 21 62 chr2 160604331 160604445 -90083409 + L1PA16 LINE L1 6037 6144 -14 335 22 0 22 chr2 160604445 160604490 -90083364 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 1003 170 0 0 chr2 160604490 160604637 -90083217 - FRAM SINE Alu -19 147 1 21 57 0 0 chr2 160604638 160604673 -90083181 + AT_rich Low_complexity Low_complexity 1 35 0 570 289 44 4 chr2 160604885 160605110 -90082744 - L1MC4a LINE L1 -1729 6079 5846 279 0 0 0 chr2 160606273 160606304 -90081550 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2299 85 0 0 chr2 160606328 160606611 -90081243 - AluSx SINE Alu -29 283 1 2329 173 96 19 chr2 160606769 160607236 -90080618 - MLT1D LTR MaLR 0 505 3 2041 78 0 58 chr2 160607345 160607640 -90080214 - L1PA12 LINE L1 0 6168 5891 2414 53 0 0 chr2 160609485 160609799 -90078055 - AluY SINE Alu 0 314 1 2309 106 0 0 chr2 160609943 160610246 -90077608 - AluSx SINE Alu -9 303 1 810 230 158 66 chr2 160610536 160611144 -90076710 + L1MC5 LINE L1 7244 7907 -54 510 196 0 21 chr2 160611166 160611263 -90076591 + AluJ SINE Alu 44 138 -174 1438 196 18 14 chr2 160611263 160611572 -90076282 + AluJo SINE Alu 3 312 0 938 191 0 0 chr2 160611871 160612053 -90075801 + AluJ SINE Alu 120 301 0 1335 219 32 0 chr2 160612065 160612184 -90075670 + AluJo SINE Alu 1 115 -197 396 0 0 0 chr2 160612184 160612228 -90075626 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1335 219 32 0 chr2 160612228 160612387 -90075467 + AluJo SINE Alu 115 288 -24 1404 271 68 20 chr2 160612387 160612924 -90074930 + L1MC4a LINE L1 5387 5952 -1856 2355 43 20 33 chr2 160612924 160613228 -90074626 + AluY SINE Alu 2 301 -10 1979 270 124 103 chr2 160613388 160614387 -90073467 - LTR28 LTR ERV1 0 1020 1 888 137 68 0 chr2 160616172 160616318 -90071536 + MSTC LTR MaLR 1 156 -272 704 178 34 0 chr2 160616318 160616436 -90071418 + FLAM_C SINE Alu 5 126 -17 1121 189 42 39 chr2 160616439 160616450 -90071404 + MSTC LTR MaLR 143 152 -276 1619 156 51 7 chr2 160616450 160616725 -90071129 + AluJb SINE Alu 3 289 -23 1121 189 42 39 chr2 160616725 160616780 -90071074 + MSTC LTR MaLR 152 205 -223 1942 115 0 38 chr2 160616780 160617067 -90070787 + AluSx SINE Alu 1 276 -36 1121 189 42 39 chr2 160617067 160617217 -90070637 + MSTC LTR MaLR 205 364 -64 1584 172 62 3 chr2 160617217 160617507 -90070347 - AluJb SINE Alu -5 307 1 1121 189 42 39 chr2 160617507 160617573 -90070281 + MSTC LTR MaLR 364 428 0 1286 68 11 0 chr2 160618429 160618606 -90069248 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 186 133 0 0 chr2 160618607 160618637 -90069217 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 554 210 81 8 chr2 160618637 160618761 -90069093 - FLAM_A SINE Alu 0 133 1 1709 156 0 30 chr2 160618797 160619099 -90068755 - AluJb SINE Alu -19 293 1 229 221 30 114 chr2 160619161 160619292 -90068562 - MER103 DNA DNA -27 139 20 882 178 15 50 chr2 160619503 160619705 -90068149 - MER3 DNA MER1_type 0 209 15 228 316 68 15 chr2 160619765 160619898 -90067956 + L2 LINE L2 3133 3272 0 241 214 48 39 chr2 160619989 160620092 -90067762 - L1ME4a LINE L1 -43 6078 5975 2297 210 79 9 chr2 160620118 160620661 -90067193 - L1ME1 LINE L1 -5 6161 5581 237 214 143 0 chr2 160621310 160621366 -90066488 - MLT2E LTR ERVL -192 436 373 2075 140 0 10 chr2 160621566 160621880 -90065974 + AluSx SINE Alu 1 311 -1 1969 227 137 7 chr2 160622877 160623414 -90064440 + MLT2E LTR ERVL 11 660 -3 214 270 22 56 chr2 160624357 160624446 -90063408 + MIR SINE MIR 19 104 -104 981 249 122 47 chr2 160624548 160624957 -90062897 + MLT1J LTR MaLR 72 511 0 2117 130 0 17 chr2 160625096 160625396 -90062458 - AluSx SINE Alu -17 295 1 1499 135 34 30 chr2 160626069 160626336 -90061518 - L1MA5A LINE L1 -6 6291 6024 2301 206 36 14 chr2 160627262 160627766 -90060088 - MLT2B1 LTR ERVL 0 520 6 387 238 0 0 chr2 160627919 160627999 -90059855 - MER94 DNA DNA -53 81 2 729 212 20 40 chr2 160628133 160628331 -90059523 - LTR67 LTR ERVL -3 554 361 206 275 0 0 chr2 160629859 160629899 -90057955 - MER91 DNA MER1_type -10 180 141 208 227 76 0 chr2 160629983 160630049 -90057805 - MER91 DNA MER1_type -82 114 44 561 151 44 12 chr2 160630140 160630244 -90057610 + MLT1C LTR MaLR 1 105 -371 2114 131 23 0 chr2 160630275 160630580 -90057274 - AluSx SINE Alu 0 312 1 459 149 0 0 chr2 160630580 160630647 -90057207 + MLT1C LTR MaLR 401 467 0 197 0 0 67 chr2 160630780 160630810 -90057044 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 1753 193 0 0 chr2 160631964 160632264 -90055590 + AluJo SINE Alu 1 300 -12 222 298 107 0 chr2 160632921 160633005 -90054849 - MIR SINE MIR -87 175 83 931 179 23 17 chr2 160633005 160633178 -90054676 - LTR40b LTR ERVL 0 462 289 1073 272 85 15 chr2 160633258 160633589 -90054265 - LTR40a LTR ERVL -165 354 1 3248 141 42 26 chr2 160633774 160634315 -90053539 + MER44D DNA MER2_type 1 605 0 3452 149 38 53 chr2 160635144 160635828 -90052026 + L1MD1 LINE L1 5569 6242 0 588 228 34 7 chr2 160636360 160636509 -90051345 - L1M4 LINE L1 -829 5317 5165 392 276 78 31 chr2 160636676 160636933 -90050921 - L1ME4a LINE L1 -238 5883 5615 363 307 203 18 chr2 160639184 160639347 -90048507 + MIR SINE MIR 25 217 -45 2351 88 3 0 chr2 160639536 160639831 -90048023 + AluSq SINE Alu 1 296 -17 322 284 0 0 chr2 160640604 160640692 -90047162 - MIR SINE MIR -122 140 53 1391 66 0 0 chr2 160641941 160642108 -90045746 + AluSc SINE Alu 132 298 -11 331 402 71 4 chr2 160642221 160642460 -90045394 - L3 LINE CR1 -36 1541 1287 248 294 220 17 chr2 160642459 160642636 -90045218 - MIR SINE MIR 0 262 50 * 478 226 141 30 chr2 160642666 160642865 -90044989 - L3 LINE CR1 -293 1284 1064 2152 120 0 10 chr2 160642869 160643169 -90044685 - AluSx SINE Alu -15 297 1 226 235 0 0 chr2 160643706 160643757 -90044097 + L1MC4a LINE L1 3791 3841 -2305 1506 240 67 78 chr2 160643815 160644335 -90043519 + L1MC4a LINE L1 5160 5124 -1022 3378 177 20 2 chr2 160644335 160644882 -90042972 + MER41D LTR ERV1 1 557 0 1506 240 67 78 chr2 160644882 160645156 -90042698 + L1MC4a LINE L1 5123 5399 -747 24 0 0 0 chr2 160646147 160646171 -90041683 + AT_rich Low_complexity Low_complexity 1 24 0 382 228 56 72 chr2 160647893 160648073 -90039781 - MER69A DNA AcHobo 0 177 1 512 200 50 27 chr2 160648352 160648571 -90039283 + L1ME3A LINE L1 5873 6170 0 2292 112 0 3 chr2 160648577 160648896 -90038958 + AluSq SINE Alu 1 318 0 2166 120 7 0 chr2 160649670 160649970 -90037884 - AluSq SINE Alu -11 302 1 414 285 38 6 chr2 160650314 160650472 -90037382 + MIR SINE MIR 74 236 -26 2399 82 3 0 chr2 160651103 160651397 -90036457 + AluSg SINE Alu 1 295 -15 536 272 25 55 chr2 160651492 160651727 -90036127 + MIR SINE MIR 12 239 -23 546 227 80 23 chr2 160651977 160652153 -90035701 + L1ME1 LINE L1 5962 6147 -19 190 304 11 54 chr2 160652858 160652950 -90034904 + MIR SINE MIR 31 118 -90 3702 134 1 68 chr2 160654437 160654535 -90033319 + L1MB3 LINE L1 5523 5626 -557 1769 191 0 3 chr2 160654535 160654844 -90033010 + AluJo SINE Alu 1 308 -4 3702 134 1 68 chr2 160654844 160655446 -90032408 + L1MB3 LINE L1 5626 6176 -7 2475 78 0 0 chr2 160655570 160655878 -90031976 - AluY SINE Alu -3 308 1 455 216 37 60 chr2 160656445 160656579 -90031275 - L1ME4a LINE L1 -24 6097 5967 327 329 163 31 chr2 160656903 160657208 -90030646 - L3b LINE CR1 -10 1573 1197 322 250 0 0 chr2 160657208 160657288 -90030566 + MER116 DNA Mariner 1 80 0 327 329 163 31 chr2 160657288 160657399 -90030455 - L3b LINE CR1 -386 1197 1102 369 0 0 0 chr2 160658585 160658626 -90029228 + (CA)n Simple_repeat Simple_repeat 1 41 0 211 254 152 0 chr2 160659201 160659298 -90028556 + MIR SINE MIR 40 154 -87 238 310 69 9 chr2 160660086 160660202 -90027652 - L2 LINE L2 -42 3230 3108 605 211 40 105 chr2 160660353 160660581 -90027273 - L1MC5 LINE L1 -44 7917 7705 214 91 0 45 chr2 160661100 160661144 -90026710 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1563 163 54 22 chr2 160661146 160661423 -90026431 - AluJb SINE Alu -26 286 1 251 338 19 25 chr2 160662240 160662397 -90025457 - MIR SINE MIR -31 231 76 2707 109 46 12 chr2 160662654 160663068 -90024786 + MSTC LTR MaLR 1 428 0 2192 117 0 3 chr2 160663890 160664189 -90023665 - AluSx SINE Alu -9 303 6 619 274 90 67 chr2 160664207 160664498 -90023356 + L1MC4a LINE L1 5299 5579 -542 455 151 0 94 chr2 160664498 160664604 -90023250 - L1PB4 LINE L1 -3 6153 6058 619 274 90 67 chr2 160664604 160664851 -90023003 + L1MC4a LINE L1 5579 5819 -302 1793 108 4 0 chr2 160664872 160665113 -90022741 + AluSp SINE Alu 61 302 -11 2490 59 7 0 chr2 160665115 160665418 -90022436 + AluY SINE Alu 1 305 -6 1442 219 17 37 chr2 160665517 160665594 -90022260 + L1ME1 LINE L1 5818 5895 -271 2125 90 0 4 chr2 160665594 160665861 -90021993 + AluSx SINE Alu 11 276 -36 1442 219 17 37 chr2 160665861 160666134 -90021720 + L1ME1 LINE L1 5895 6161 -5 341 43 21 0 chr2 160666495 160666542 -90021312 + (TG)n Simple_repeat Simple_repeat 1 48 0 244 289 182 32 chr2 160666714 160666901 -90020953 - L2 LINE L2 -1756 1558 1344 2129 113 3 3 chr2 160667026 160667327 -90020527 + AluSg SINE Alu 6 306 -4 226 219 156 0 chr2 160667424 160667488 -90020366 - Charlie8 DNA MER1_type -2246 171 98 275 27 54 0 chr2 160667498 160667561 -90020293 + AluY SINE Alu 244 308 0 835 144 0 0 chr2 160667793 160667911 -90019943 + FLAM_C SINE Alu 1 118 -15 2011 128 7 4 chr2 160667920 160668225 -90019629 - AluSx SINE Alu 0 306 1 30 27 0 0 chr2 160668225 160668262 -90019592 + AT_rich Low_complexity Low_complexity 1 37 0 2058 121 3 0 chr2 160668384 160668673 -90019181 - AluSp SINE Alu -10 303 14 702 173 0 24 chr2 160668887 160669014 -90018840 + FLAM_C SINE Alu 2 125 -18 202 176 0 0 chr2 160669471 160669505 -90018349 + MER5A DNA MER1_type 140 173 -16 1590 158 0 77 chr2 160669834 160670144 -90017710 - AluJo SINE Alu -16 296 11 1648 91 4 4 chr2 160670269 160670500 -90017354 + MER50 LTR ERV1 2 232 -502 329 181 42 28 chr2 160670502 160670574 -90017280 + MER50 LTR ERV1 435 507 -227 942 144 88 0 chr2 160670686 160670846 -90017008 + MER50 LTR ERV1 561 734 0 6998 56 9 51 chr2 160671433 160672306 -90015548 - L1PA7 LINE L1 -6 6148 5294 2244 105 0 3 chr2 160672306 160672602 -90015252 - AluY SINE Alu -16 295 1 6998 56 9 51 chr2 160672602 160672802 -90015052 - L1PA7 LINE L1 -860 5294 5087 2123 139 0 7 chr2 160672808 160673110 -90014744 + AluSx SINE Alu 1 300 -12 384 22 0 0 chr2 160673963 160674008 -90013846 + (CA)n Simple_repeat Simple_repeat 1 45 0 1972 193 70 31 chr2 160674216 160674447 -90013407 - MLT1D LTR MaLR -3 502 282 2332 104 7 0 chr2 160674447 160674755 -90013099 - AluSx SINE Alu -2 310 1 1972 193 70 31 chr2 160674755 160675006 -90012848 - MLT1D LTR MaLR -223 282 1 928 142 117 0 chr2 160675341 160675503 -90012351 - L1MCa LINE L1 -6001 425 245 498 228 8 41 chr2 160675618 160675741 -90012113 - MER20B DNA MER1_type -647 136 18 426 158 146 0 chr2 160676852 160676934 -90010920 - MIR SINE MIR -98 164 71 16800 84 7 16 chr2 160678225 160680518 -90007336 + HERVE LTR ERV1 2892 5165 -2648 2206 193 91 30 chr2 160680518 160682820 -90005034 - SATR1 Satellite Satellite -2 2442 1 1244 209 239 33 chr2 160682861 160683999 -90003855 - SATR1 Satellite Satellite -2 1372 1 1509 99 27 18 chr2 160684027 160684249 -90003605 - AluSq SINE Alu -89 224 1 684 239 46 0 chr2 160686158 160686355 -90001499 + MER6B DNA MER2_type 5 210 0 217 305 26 52 chr2 160686458 160686612 -90001242 + MER5B DNA MER1_type 5 154 -24 1161 166 28 125 chr2 160686797 160687116 -90000738 - AluYb8 SINE Alu -30 288 1 855 171 17 28 chr2 160687306 160687487 -90000367 + L1MA4 LINE L1 5771 5949 -351 1588 122 4 4 chr2 160687488 160687718 -90000136 + AluSx SINE Alu 1 230 -82 591 241 285 4 chr2 160687746 160688125 -89999729 - SATR1 Satellite Satellite -2 485 1 2296 190 123 12 chr2 160688163 160689574 -89998280 - SATR1 Satellite Satellite -1 1567 1 233 217 14 49 chr2 160689748 160689891 -89997963 + (TTA)n Simple_repeat Simple_repeat 1 138 0 1131 222 164 16 chr2 160689911 160690290 -89997564 + SATR1 Satellite Satellite 12 446 -24 1805 198 65 50 chr2 160690345 160690804 -89997050 - SATR1 Satellite Satellite -1 469 4 2292 171 103 7 chr2 160690837 160691494 -89996360 - SATR1 Satellite Satellite 0 719 1 809 208 0 42 chr2 160691665 160691857 -89995997 + LTR2 LTR ERV1 266 449 0 518 122 0 0 chr2 160691862 160691936 -89995918 - tRNA-Glu-GAG tRNA tRNA 0 75 2 29046 89 13 10 chr2 160691937 160695861 -89991993 + HERVE LTR ERV1 647 4580 -3233 923 206 275 30 chr2 160695961 160696408 -89991446 - SATR1 Satellite Satellite -1 556 1 1483 109 27 14 chr2 160696410 160696631 -89991223 - AluSq SINE Alu -89 224 1 708 234 46 0 chr2 160698505 160698702 -89989152 + MER6B DNA MER2_type 5 210 0 347 205 36 0 chr2 160698807 160698890 -89988964 - MER5B DNA MER1_type -6 172 87 294 244 94 62 chr2 160699107 160699118 -89988736 - HsTC2 DNA Tc2 -103 1795 1786 1970 142 0 25 chr2 160699118 160699435 -89988419 - AluSp SINE Alu -4 309 1 294 244 94 62 chr2 160699435 160699583 -89988271 - HsTC2 DNA Tc2 -112 1786 1631 1322 216 3 72 chr2 160699624 160699804 -89988050 + L1MA4 LINE L1 5770 5910 -390 1706 151 7 4 chr2 160699804 160700083 -89987771 + AluSx SINE Alu 1 280 -32 1322 216 3 72 chr2 160700083 160700290 -89987564 + L1MA4 LINE L1 5910 6130 -170 1996 134 3 3 chr2 160700369 160700676 -89987178 - AluSp SINE Alu -4 309 3 3020 232 25 52 chr2 160700723 160701715 -89986139 + L1MB3 LINE L1 4818 5835 -348 2020 125 6 10 chr2 160701715 160702028 -89985826 + AluSx SINE Alu 1 312 0 3020 232 25 52 chr2 160702028 160702158 -89985696 + L1MB3 LINE L1 5835 5967 -216 1947 138 7 0 chr2 160702158 160702449 -89985405 + AluSx SINE Alu 12 304 -8 3020 232 25 52 chr2 160702449 160702695 -89985159 + L1MB3 LINE L1 5967 6151 -32 189 132 0 0 chr2 160703478 160703516 -89984338 + (ATG)n Simple_repeat Simple_repeat 3 40 0 217 341 61 28 chr2 160703535 160703749 -89984105 - MIR SINE MIR -10 252 32 2160 98 10 7 chr2 160704143 160704449 -89983405 + AluSg SINE Alu 1 307 -3 226 319 44 26 chr2 160704833 160704946 -89982908 + L2 LINE L2 3158 3272 0 2181 93 0 10 chr2 160705011 160705313 -89982541 - AluSc SINE Alu -10 299 1 960 218 195 30 chr2 160707066 160707471 -89980383 - SATR1 Satellite Satellite -1 471 1 960 227 249 43 chr2 160707523 160708364 -89979490 - SATR1 Satellite Satellite -1 1014 1 1933 212 168 17 chr2 160708385 160709549 -89978305 - SATR1 Satellite Satellite -1 1339 1 252 209 11 73 chr2 160709647 160709838 -89978016 + (TTA)n Simple_repeat Simple_repeat 1 179 0 29039 97 11 11 chr2 160709908 160713966 -89973888 + HERVE LTR ERV1 1108 5165 -2648 2308 180 111 5 chr2 160713966 160715578 -89972276 - SATR1 Satellite Satellite -3 1783 1 1973 196 191 56 chr2 160715617 160717510 -89970344 - SATR1 Satellite Satellite -2 2149 1 1509 99 27 18 chr2 160717539 160717761 -89970093 - AluSq SINE Alu -89 224 1 654 237 45 5 chr2 160719670 160719868 -89967986 + MER6B DNA MER2_type 5 210 0 341 235 96 9 chr2 160719971 160720086 -89967768 - MER5B DNA MER1_type -4 174 50 1384 168 20 114 chr2 160720280 160720631 -89967223 - AluYb8 SINE Alu 0 318 1 855 171 17 28 chr2 160720821 160721002 -89966852 + L1MA4 LINE L1 5771 5949 -351 1592 130 0 4 chr2 160721003 160721234 -89966620 + AluSx SINE Alu 1 230 -82 591 241 285 4 chr2 160721262 160721641 -89966213 - SATR1 Satellite Satellite -2 485 1 2296 190 123 12 chr2 160721679 160723091 -89964763 - SATR1 Satellite Satellite -1 1567 1 1882 103 48 38 chr2 160723296 160723587 -89964267 - AluSx SINE Alu -18 294 1 2087 238 85 6 chr2 160723670 160724200 -89963654 + MER97b DNA MER1_type? 3 574 -479 1438 66 0 16 chr2 160724481 160724663 -89963191 - AluYb8 SINE Alu -139 179 1 771 89 27 18 chr2 160724666 160724778 -89963076 + Tigger1 DNA MER2_type 2248 2360 -58 632 238 8 0 chr2 160724842 160724968 -89962886 + FLAM_A SINE Alu 1 127 -6 1426 101 0 0 chr2 160725045 160725224 -89962630 - AluSx SINE Alu -131 181 3 1807 180 7 7 chr2 160725268 160725568 -89962286 + AluJo SINE Alu 1 300 -12 1827 165 10 0 chr2 160726042 160726339 -89961515 - AluJb SINE Alu -12 300 1 180 0 0 0 chr2 160726343 160726363 -89961491 + (T)n Simple_repeat Simple_repeat 1 20 0 25 0 0 0 chr2 160726422 160726447 -89961407 + AT_rich Low_complexity Low_complexity 1 25 0 491 240 154 17 chr2 160726457 160726690 -89961164 - MER110A LTR ERV1 -20 448 184 408 159 14 0 chr2 160726725 160726794 -89961060 + MLT1A2 LTR MaLR 1 70 -304 1441 145 17 21 chr2 160726794 160727035 -89960819 - Tigger2a DNA MER2_type 0 444 205 808 182 0 0 chr2 160727037 160727158 -89960696 + FLAM_C SINE Alu 3 123 -20 186 43 0 0 chr2 160727162 160727185 -89960669 + (GAA)n Simple_repeat Simple_repeat 2 24 0 977 140 27 104 chr2 160727185 160727232 -89960622 - Tigger2a DNA MER2_type -2504 204 155 2131 103 0 0 chr2 160727232 160727505 -89960349 + AluSg SINE Alu 1 273 -37 351 0 0 0 chr2 160727510 160727549 -89960305 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 977 140 27 104 chr2 160727549 160727716 -89960138 - Tigger2a DNA MER2_type -2557 151 1 * 1125 149 111 76 chr2 160727716 160728003 -89959851 + MLT1A2 LTR MaLR 69 365 -9 346 250 16 113 chr2 160728115 160728239 -89959615 - MER52A LTR ERV1 -300 1455 1344 2156 208 24 57 chr2 160728264 160728940 -89958914 - LTR27 LTR ERV1 -141 495 2 220 167 136 15 chr2 160730006 160730072 -89957782 + MIR SINE MIR 168 241 -21 28 48 0 0 chr2 160730112 160730154 -89957700 + AT_rich Low_complexity Low_complexity 1 42 0 1016 153 11 17 chr2 160730592 160730768 -89957086 - L1MC1 LINE L1 0 6333 6159 1207 199 4 13 chr2 160730768 160730994 -89956860 - AluJo SINE Alu -88 224 1 1771 159 106 0 chr2 160730996 160731317 -89956537 - L1MC1 LINE L1 -2310 5685 5331 1512 171 148 41 chr2 160731317 160731710 -89956144 - MSTB2 LTR MaLR 0 457 23 1751 213 27 18 chr2 160731729 160732118 -89955736 - L1MC1 LINE L1 -812 5334 4939 203 0 0 36 chr2 160732118 160732146 -89955708 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1751 213 27 18 chr2 160732146 160732197 -89955657 - L1MC1 LINE L1 -1207 4939 4890 1797 87 4 21 chr2 160732199 160732440 -89955414 + AluY SINE Alu 1 237 -74 334 284 103 0 chr2 160732552 160732668 -89955186 + MIR SINE MIR 34 161 -101 354 219 187 0 chr2 160732722 160732845 -89955009 + MIR SINE MIR 91 236 -26 2123 144 0 0 chr2 160732991 160733290 -89954564 + AluSx SINE Alu 11 309 -3 1358 149 0 31 chr2 160733711 160733933 -89953921 + AluJo SINE Alu 85 299 -13 901 171 19 0 chr2 160736588 160736746 -89951108 + AluJb SINE Alu 136 296 -16 2435 184 216 16 chr2 160736750 160737447 -89950407 + L1ME1 LINE L1 5340 6184 0 2256 102 3 0 chr2 160737458 160737752 -89950102 + AluSx SINE Alu 1 295 -17 617 182 0 9 chr2 160737775 160737885 -89949969 + FLAM_A SINE Alu 23 131 -11 418 315 65 36 chr2 160737901 160738180 -89949674 - L2 LINE L2 -583 2731 2445 22 0 0 0 chr2 160738578 160738600 -89949254 + AT_rich Low_complexity Low_complexity 1 22 0 1545 141 0 29 chr2 160738909 160739151 -89948703 + AluJo SINE Alu 1 235 -77 839 128 0 0 chr2 160739252 160739361 -89948493 + FRAM SINE Alu 21 129 -47 2210 114 7 0 chr2 160739401 160739698 -89948156 + AluSp SINE Alu 3 301 -12 1221 174 10 0 chr2 160739772 160739967 -89947887 + AluJo SINE Alu 86 282 -30 246 32 0 0 chr2 160739970 160740001 -89947853 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 259 156 41 115 chr2 160740191 160740313 -89947541 - HAL1 LINE L1 -109 2398 2286 1275 178 115 32 chr2 160740313 160740603 -89947251 + MLT1A1 LTR MaLR 1 320 -45 1490 159 55 38 chr2 160740603 160740892 -89946962 - AluJb SINE Alu -18 294 1 1275 178 115 32 chr2 160740892 160740915 -89946939 + MLT1A1 LTR MaLR 320 340 -25 4393 251 79 57 chr2 160741217 160741647 -89946207 - HAL1 LINE L1 -541 1966 1547 1964 150 7 0 chr2 160741647 160741940 -89945914 - AluSx SINE Alu -17 295 1 4393 251 79 57 chr2 160741940 160742190 -89945664 - HAL1 LINE L1 -960 1547 1304 2038 194 96 35 chr2 160742190 160742414 -89945440 + MLT2B1 LTR ERVL 1 210 -310 1882 142 48 0 chr2 160742414 160742703 -89945151 + AluJb SINE Alu 1 303 -9 2038 194 96 35 chr2 160742703 160742967 -89944887 + MLT2B1 LTR ERVL 210 519 -1 4393 251 79 57 chr2 160742967 160744174 -89943680 - HAL1 LINE L1 -1203 1304 35 2138 132 0 10 chr2 160744444 160744754 -89943100 - AluSx SINE Alu 0 312 6 180 77 0 0 chr2 160744759 160744785 -89943069 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 1498 97 24 0 chr2 160744785 160744991 -89942863 - L1PA10 LINE L1 -21 6147 5937 198 191 0 0 chr2 160745066 160745113 -89942741 + (CA)n Simple_repeat Simple_repeat 2 48 0 772 266 23 5 chr2 160745463 160745681 -89942173 - LTR33 LTR ERVL -7 514 293 230 69 0 0 chr2 160745756 160745785 -89942069 - MER53 DNA DNA -160 29 1 759 221 104 8 chr2 160746831 160747071 -89940783 - MER97c DNA MER1_type? -1 1089 827 851 154 85 69 chr2 160747259 160747285 -89940569 + L1MD2 LINE L1 6107 6131 -228 1817 172 3 7 chr2 160747285 160747588 -89940266 + AluJb SINE Alu 1 302 -10 851 154 85 69 chr2 160747588 160747807 -89940047 + L1MD2 LINE L1 6131 6356 -3 230 266 0 0 chr2 160747803 160747867 -89939987 + L1ME1 LINE L1 5892 5955 -211 * 2191 228 18 26 chr2 160747976 160748476 -89939378 + LTR31 LTR ERV1 109 604 -15 394 234 80 29 chr2 160748485 160748622 -89939232 + L1ME1 LINE L1 6005 6148 -18 201 233 225 58 chr2 160748717 160748837 -89939017 + MIR SINE MIR 120 259 -3 1495 156 62 82 chr2 160748908 160749325 -89938529 + LTR37A LTR ERV1 18 426 0 654 103 0 111 chr2 160749326 160749443 -89938411 - AluSx SINE Alu -13 299 196 852 104 0 0 chr2 160749443 160749549 -89938305 - AluSx SINE Alu -207 106 1 2187 115 0 7 chr2 160749725 160750051 -89937803 - AluSx SINE Alu 0 324 1 203 294 0 0 chr2 160750078 160750129 -89937725 + L2 LINE L2 3222 3272 0 924 254 122 21 chr2 160750255 160750582 -89937272 - MLT1I LTR MaLR -2 407 48 217 179 60 0 chr2 160750674 160750741 -89937113 + (TA)n Simple_repeat Simple_repeat 1 71 0 1521 127 4 28 chr2 160750742 160750994 -89936860 - L1PA16 LINE L1 -9 6157 5912 647 287 7 52 chr2 160751091 160751363 -89936491 - MER52A LTR ERV1 0 1755 1496 357 315 23 0 chr2 160751682 160751812 -89936042 - MIR3 SINE MIR -3 205 73 262 264 37 135 chr2 160752144 160752440 -89935414 - L2 LINE L2 -119 3153 2887 2036 135 0 0 chr2 160753449 160753757 -89934097 + AluJb SINE Alu 1 308 0 379 208 10 30 chr2 160754200 160754301 -89933553 - MIR SINE MIR -46 216 118 1404 232 141 3 chr2 160754542 160754925 -89932929 + MER110 LTR ERV1 55 490 -1 2144 96 11 0 chr2 160755686 160755992 -89931862 - AluSp SINE Alu 0 309 1 715 203 20 0 chr2 160756000 160756148 -89931706 - L1ME2 LINE L1 -17 6147 5997 2663 217 27 23 chr2 160756205 160756855 -89930999 - L1ME2 LINE L1 -259 5905 5259 1601 172 23 33 chr2 160756855 160757157 -89930697 - AluJo SINE Alu -13 299 1 2663 217 27 23 chr2 160757157 160757217 -89930637 - L1ME2 LINE L1 -905 5259 5189 2032 120 43 3 chr2 160757217 160757516 -89930338 - AluSq SINE Alu -2 311 1 2663 217 27 23 chr2 160757516 160757533 -89930321 - L1ME2 LINE L1 -975 5189 5174 285 264 64 36 chr2 160757557 160757697 -89930157 - MIR SINE MIR -33 229 86 2349 187 113 12 chr2 160757762 160759742 -89928112 + SATR1 Satellite Satellite 1 2179 -30 3286 97 0 0 chr2 160759743 160760175 -89927679 - HERVE LTR ERV1 -2639 5174 4743 1112 168 0 0 chr2 160760282 160760455 -89927399 - AluSq SINE Alu -39 274 102 313 0 0 0 chr2 160760455 160760489 -89927365 + U2 snRNA snRNA 1 34 -154 732 191 0 0 chr2 160760489 160760604 -89927250 - AluSq SINE Alu -197 116 2 5779 212 39 71 chr2 160760605 160760646 -89927208 - L1ME2 LINE L1 -1441 4705 4664 288 0 0 0 chr2 160760646 160760678 -89927176 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 5779 212 39 71 chr2 160760678 160761254 -89926600 - L1ME2 LINE L1 -1482 4664 4071 2396 97 3 0 chr2 160761254 160761565 -89926289 - AluSp SINE Alu -1 312 1 5779 212 39 71 chr2 160761565 160762750 -89925104 - L1ME2 LINE L1 -2075 4071 2960 198 266 31 16 chr2 160762968 160763032 -89924822 + MER5B DNA MER1_type 89 153 -25 285 341 196 19 chr2 160763089 160763303 -89924551 + L2 LINE L2 2923 3174 -98 2768 205 2 34 chr2 160763314 160763599 -89924255 - MLT1F LTR MaLR 0 542 249 1930 180 105 10 chr2 160763599 160763988 -89923866 + MSTB LTR MaLR 1 426 0 2768 205 2 34 chr2 160763988 160764211 -89923643 - MLT1F LTR MaLR -293 249 51 2110 162 21 0 chr2 160764211 160764550 -89923304 + MER7A DNA MER2_type 3 346 0 2768 205 2 34 chr2 160764550 160764600 -89923254 - MLT1F LTR MaLR -491 51 1 984 245 58 80 chr2 160764691 160765140 -89922714 + MLT1K LTR MaLR 139 577 -11 569 258 69 26 chr2 160766276 160766414 -89921440 + MIR SINE MIR 19 172 -90 560 214 8 56 chr2 160766414 160766540 -89921314 + FLAM_A SINE Alu 1 120 -13 569 258 69 26 chr2 160766540 160766634 -89921220 + MIR SINE MIR 172 261 -1 22 0 0 0 chr2 160766723 160766745 -89921109 + AT_rich Low_complexity Low_complexity 1 22 0 1254 129 0 6 chr2 160767144 160767322 -89920532 - AluJb SINE Alu -135 177 1 1912 131 14 3 chr2 160768563 160768853 -89919001 - AluSx SINE Alu -18 294 2 692 243 34 17 chr2 160769488 160769665 -89918189 - U2 snRNA snRNA -3 185 6 2275 108 0 0 chr2 160770000 160770295 -89917559 + AluSx SINE Alu 1 295 -17 500 245 28 21 chr2 160770296 160770439 -89917415 - L1MC5 LINE L1 -36 7925 7782 775 141 8 23 chr2 160770466 160770594 -89917260 - FLAM_C SINE Alu -3 140 15 355 172 200 48 chr2 160770609 160770754 -89917100 - L1MC5 LINE L1 -262 7699 7533 1031 282 43 35 chr2 160770764 160771111 -89916743 - MLT1I LTR MaLR 0 409 60 477 243 116 16 chr2 160771152 160771341 -89916513 - L1MC5 LINE L1 -440 7521 7314 1452 236 68 68 chr2 160771453 160771995 -89915859 - MLT1F LTR MaLR 0 542 1 2379 80 10 3 chr2 160772032 160772331 -89915523 + AluSg SINE Alu 1 301 -9 24 32 0 0 chr2 160772480 160772511 -89915343 + AT_rich Low_complexity Low_complexity 1 31 0 746 242 22 63 chr2 160772552 160772671 -89915183 + L1M3 LINE L1 5506 5628 -548 484 205 137 0 chr2 160772671 160772788 -89915066 - FLAM_A SINE Alu 0 133 1 746 242 22 63 chr2 160772788 160772961 -89914893 + L1M3 LINE L1 5628 5781 -395 1286 124 14 24 chr2 160772961 160773171 -89914683 + MER2 DNA MER2_type 2 209 -136 9352 137 14 17 chr2 160773310 160773836 -89914018 + Tigger1 DNA MER2_type 1 527 -1891 2321 70 0 0 chr2 160773836 160774109 -89913745 + AluSc SINE Alu 27 299 -10 9352 137 14 17 chr2 160774109 160774829 -89913025 + Tigger1 DNA MER2_type 527 1245 -1173 2197 113 7 0 chr2 160774829 160775121 -89912733 - AluSq SINE Alu -17 296 3 9352 137 14 17 chr2 160775121 160775355 -89912499 + Tigger1 DNA MER2_type 1245 1478 -940 316 257 9 37 chr2 160775523 160775632 -89912222 + L1ME4a LINE L1 5926 6031 -90 959 104 0 8 chr2 160775639 160775773 -89912081 - FLAM_C SINE Alu 0 133 1 1597 223 200 25 chr2 160775777 160775875 -89911979 + MLT1F1 LTR MaLR 1 80 -487 333 0 0 0 chr2 160775875 160775912 -89911942 + (TG)n Simple_repeat Simple_repeat 1 37 0 1597 223 200 25 chr2 160775912 160776292 -89911562 + MLT1F1 LTR MaLR 80 563 -4 2109 110 27 13 chr2 160776327 160776628 -89911226 - AluSg SINE Alu -5 305 1 1579 174 24 20 chr2 160776707 160777001 -89910853 + AluJo SINE Alu 1 295 -17 2265 125 0 0 chr2 160778942 160779239 -89908615 + AluSx SINE Alu 1 297 -15 2392 105 0 3 chr2 160779436 160779750 -89908104 + AluSq SINE Alu 1 313 0 23 68 0 0 chr2 160779764 160779808 -89908046 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr2 160780104 160780125 -89907729 + AT_rich Low_complexity Low_complexity 1 21 0 201 304 152 7 chr2 160780684 160780822 -89907032 + MIR SINE MIR 90 247 -15 910 283 103 19 chr2 160780833 160781200 -89906654 + MLT1I LTR MaLR 3 400 -9 735 160 64 0 chr2 160781382 160781507 -89906347 - FRAM SINE Alu -33 143 11 2286 97 16 3 chr2 160781847 160782155 -89905699 - AluSp SINE Alu -1 312 1 841 248 109 74 chr2 160782203 160782687 -89905167 - MLT1J LTR MaLR -8 503 3 582 240 17 57 chr2 160782691 160782866 -89904988 - MIR SINE MIR -54 208 41 234 62 0 0 chr2 160783579 160783611 -89904243 + (TG)n Simple_repeat Simple_repeat 1 32 0 1809 156 23 26 chr2 160783698 160784006 -89903848 - AluJo SINE Alu -5 307 1 2498 83 3 0 chr2 160784012 160784324 -89903530 - AluSp SINE Alu 0 313 1 424 290 105 42 chr2 160784430 160784847 -89903007 - L1ME4a LINE L1 -169 5952 5507 675 278 78 32 chr2 160784853 160785204 -89902650 + LTR50 LTR ERVL 1 346 -177 460 207 93 21 chr2 160785208 160785348 -89902506 + LTR33A LTR ERVL 365 514 -9 25 90 0 0 chr2 160785458 160785525 -89902329 + AT_rich Low_complexity Low_complexity 1 67 0 1113 227 60 113 chr2 160785583 160785787 -89902067 + MLT1D LTR MaLR 1 214 -291 771 228 95 0 chr2 160785787 160785945 -89901909 + FAM SINE Alu 2 174 -1 1113 227 60 113 chr2 160785945 160786273 -89901581 + MLT1D LTR MaLR 214 505 0 221 0 0 33 chr2 160786473 160786503 -89901351 + (TTCTG)n Simple_repeat Simple_repeat 4 32 0 2049 120 23 3 chr2 160786725 160787024 -89900830 - AluJb SINE Alu -7 305 1 451 104 13 26 chr2 160787057 160787134 -89900720 + SVA Other Other 488 563 -823 22 35 0 0 chr2 160787215 160787244 -89900610 + AT_rich Low_complexity Low_complexity 1 29 0 499 316 41 62 chr2 160787472 160787908 -89899946 + MLT1K LTR MaLR 141 567 -21 241 36 0 0 chr2 160788585 160788640 -89899214 - AluY SINE Alu 0 309 255 1390 194 51 31 chr2 160788784 160789077 -89898777 - AluJo SINE Alu -13 299 1 1992 120 14 3 chr2 160789241 160789525 -89898329 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr2 160789532 160789554 -89898300 + AT_rich Low_complexity Low_complexity 1 22 0 596 246 149 58 chr2 160789601 160789983 -89897871 + MLT1F LTR MaLR 120 536 -6 230 171 0 0 chr2 160790029 160790064 -89897790 - L2 LINE L2 -96 3217 3183 2642 48 0 3 chr2 160790236 160790545 -89897309 - AluY SINE Alu -3 308 1 1303 169 55 19 chr2 160790621 160790928 -89896926 - L1MD1 LINE L1 0 6242 5925 797 171 79 6 chr2 160790932 160791096 -89896758 + AluJb SINE Alu 137 312 0 2472 55 3 0 chr2 160791096 160791420 -89896434 + AluY SINE Alu 1 325 0 1848 160 49 9 chr2 160791424 160791755 -89896099 - L1MD1 LINE L1 -302 5940 5593 213 39 0 0 chr2 160791755 160791781 -89896073 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1848 160 49 9 chr2 160791781 160791799 -89896055 - L1MD1 LINE L1 -649 5593 5577 1202 162 131 35 chr2 160791804 160792063 -89895791 + AluJo SINE Alu 11 294 -18 467 214 0 0 chr2 160792088 160792172 -89895682 - L1MD1 LINE L1 -651 5591 5508 392 294 95 23 chr2 160793794 160794024 -89893830 - MIR SINE MIR 0 262 19 22 70 0 0 chr2 160794723 160794766 -89893088 + AT_rich Low_complexity Low_complexity 1 43 0 26 30 0 0 chr2 160795508 160795541 -89892313 + AT_rich Low_complexity Low_complexity 1 33 0 35 54 0 0 chr2 160797770 160797826 -89890028 + GC_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr2 160798417 160798445 -89889409 + GC_rich Low_complexity Low_complexity 1 28 0 204 282 97 40 chr2 160801101 160801225 -89886629 - MIR3 SINE MIR -76 132 2 971 201 60 116 chr2 160803590 160803716 -89884138 + MER2 DNA MER2_type 9 141 -204 2296 103 3 7 chr2 160803716 160804017 -89883837 - AluSx SINE Alu -12 300 1 1658 141 7 67 chr2 160804026 160804323 -89883531 - AluJb SINE Alu -21 291 13 971 201 60 116 chr2 160804323 160804438 -89883416 + MER2 DNA MER2_type 149 237 -108 217 51 51 0 chr2 160804438 160804477 -89883377 + (TATTG)n Simple_repeat Simple_repeat 5 45 0 971 201 60 116 chr2 160804477 160804577 -89883277 + MER2 DNA MER2_type 237 341 -4 513 313 12 0 chr2 160804599 160804762 -89883092 + MLT1L LTR MaLR 50 214 -401 726 147 17 0 chr2 160804901 160805017 -89882837 - FLAM_C SINE Alu -24 119 2 300 213 93 0 chr2 160805031 160805106 -89882748 + MLT1L LTR MaLR 474 555 -60 2313 122 0 0 chr2 160805106 160805418 -89882436 - AluJb SINE Alu 0 312 1 947 225 212 16 chr2 160805442 160805815 -89882039 + Charlie7 DNA MER1_type 29 474 -2138 2255 112 0 0 chr2 160805883 160806189 -89881665 + AluSx SINE Alu 1 306 0 22 80 0 0 chr2 160806336 160806386 -89881468 + AT_rich Low_complexity Low_complexity 1 50 0 1015 175 0 0 chr2 160806422 160806588 -89881266 - FRAM SINE Alu 0 166 1 26 0 0 27 chr2 160806588 160806603 -89881251 + AT_rich Low_complexity Low_complexity 1 15 -21 2130 130 0 0 chr2 160806603 160806895 -89880959 - AluSx SINE Alu -20 292 1 26 0 0 27 chr2 160806895 160806916 -89880938 + AT_rich Low_complexity Low_complexity 15 36 0 314 194 0 16 chr2 160806956 160807018 -89880836 + MLT1L LTR MaLR 555 615 0 1778 190 0 16 chr2 160808491 160808807 -89879047 + AluJb SINE Alu 1 311 -1 576 228 24 42 chr2 160809399 160809566 -89878288 + MER103 DNA DNA 1 164 -2 231 242 91 38 chr2 160809644 160809776 -89878078 - L1MC5 LINE L1 -191 7770 7632 2563 57 3 0 chr2 160809779 160810076 -89877778 + AluY SINE Alu 1 298 -13 355 289 86 0 chr2 160810248 160810376 -89877478 - L1MC5 LINE L1 -534 7427 7289 1365 191 11 36 chr2 160810474 160810752 -89877102 + AluJo SINE Alu 18 288 -24 468 0 0 0 chr2 160810776 160810828 -89877026 + (TA)n Simple_repeat Simple_repeat 1 52 0 246 264 242 22 chr2 160811633 160811815 -89876039 + MIR SINE MIR 5 226 -36 1681 171 6 54 chr2 160811865 160812207 -89875647 - AluJo SINE Alu 0 327 1 2633 43 0 3 chr2 160812469 160812772 -89875082 + AluY SINE Alu 1 302 -9 234 62 0 0 chr2 160813949 160813981 -89873873 + (GGA)n Simple_repeat Simple_repeat 3 34 0 246 317 106 39 chr2 160814052 160814412 -89873442 - L2 LINE L2 -337 2977 2594 262 239 45 23 chr2 160814487 160814575 -89873279 - MIR SINE MIR -62 200 111 1722 169 44 102 chr2 160814642 160814926 -89872928 - LTR54B LTR ERV1 -2 496 256 2171 127 3 0 chr2 160814926 160815225 -89872629 - AluSg SINE Alu -10 300 1 1722 169 44 102 chr2 160815225 160815467 -89872387 - LTR54B LTR ERV1 -242 256 1 331 287 25 25 chr2 160815776 160815898 -89871956 - MER5A DNA MER1_type -22 167 46 1375 118 5 50 chr2 160816297 160816517 -89871337 + AluSg/x SINE Alu 93 302 -10 2148 124 0 7 chr2 160816528 160816819 -89871035 + AluJb SINE Alu 1 289 -23 245 353 66 0 chr2 160816938 160817060 -89870794 + MIR SINE MIR 18 147 -115 2252 87 3 13 chr2 160817325 160817634 -89870220 + AluSx SINE Alu 1 306 -6 227 308 0 0 chr2 160817939 160818004 -89869850 - L2 LINE L2 0 3313 3249 261 209 0 0 chr2 160818512 160818555 -89869299 + AluJ/monomer SINE Alu 2 44 -258 1907 162 3 16 chr2 160818608 160818916 -89868938 + AluJo SINE Alu 1 304 -8 465 270 156 9 chr2 160819075 160819203 -89868651 + MIR SINE MIR 2 110 -152 1984 89 13 70 chr2 160819203 160819516 -89868338 - AluSg SINE Alu -15 295 1 465 270 156 9 chr2 160819516 160819598 -89868256 + MIR SINE MIR 110 243 -19 272 336 99 48 chr2 160819656 160820010 -89867844 - L2 LINE L2 -73 3199 2828 1873 137 0 69 chr2 160820071 160820406 -89867448 + AluJb SINE Alu 1 312 0 343 286 17 0 chr2 160820595 160820714 -89867140 + L1MC3 LINE L1 5761 5881 -1927 2279 84 27 3 chr2 160820752 160821049 -89866805 + AluY SINE Alu 1 304 -7 2046 139 0 7 chr2 160821361 160821663 -89866191 + AluJb SINE Alu 1 300 -12 2349 62 0 58 chr2 160821790 160822098 -89865756 - AluY SINE Alu -19 292 3 1339 169 50 0 chr2 160822532 160822774 -89865080 - AluJb SINE Alu 0 312 59 235 88 0 0 chr2 160822816 160822850 -89865004 - HY3 scRNA scRNA -1 100 67 22 56 0 0 chr2 160822911 160822947 -89864907 + AT_rich Low_complexity Low_complexity 1 36 0 1559 169 24 14 chr2 160823552 160823848 -89864006 - AluJo SINE Alu -10 302 4 1801 151 10 33 chr2 160825349 160825653 -89862201 + AluJb SINE Alu 1 297 -15 2724 223 149 22 chr2 160826289 160827089 -89860765 + L1MC3 LINE L1 6190 7090 -695 345 225 32 20 chr2 160827096 160827200 -89860654 + MLT1F1 LTR MaLR 35 138 -442 441 165 12 12 chr2 160827200 160827285 -89860569 + L1MD3 LINE L1 7413 7497 -498 1440 127 73 33 chr2 160827310 160827555 -89860299 + AluJo SINE Alu 54 308 -4 673 194 24 0 chr2 160829228 160829352 -89858502 - FLAM_C SINE Alu -5 128 2 631 243 81 5 chr2 160830154 160830339 -89857515 - MIR SINE MIR -23 239 41 956 138 66 0 chr2 160830655 160830822 -89857032 + L1MB3 LINE L1 6004 6181 -2 568 306 86 9 chr2 160830889 160831111 -89856743 - MIR SINE MIR -12 250 12 22 35 0 0 chr2 160832122 160832151 -89855703 + AT_rich Low_complexity Low_complexity 1 29 0 280 187 53 27 chr2 160832691 160832766 -89855088 + L2 LINE L2 3217 3293 -20 297 258 0 0 chr2 160832775 160832841 -89855013 - MIR SINE MIR -125 137 72 21 36 0 0 chr2 160833704 160833732 -89854122 + AT_rich Low_complexity Low_complexity 1 28 0 188 119 0 48 chr2 160833886 160833928 -89853926 + (TATG)n Simple_repeat Simple_repeat 3 42 0 3369 118 12 23 chr2 160834031 160834548 -89853306 - MER9 LTR ERVK 0 511 1 1880 164 10 0 chr2 160834589 160834882 -89852972 + AluJb SINE Alu 1 296 -16 33 25 0 0 chr2 160834904 160834944 -89852910 + AT_rich Low_complexity Low_complexity 1 40 0 208 186 151 81 chr2 160834950 160835036 -89852818 + MIR SINE MIR 161 252 -10 2086 131 3 7 chr2 160835293 160835599 -89852255 + AluSx SINE Alu 1 305 -7 1716 135 50 130 chr2 160836303 160836419 -89851435 + Tigger3(Golem) DNA MER2_type 1 125 -2903 2378 94 3 0 chr2 160836419 160836726 -89851128 - AluSp SINE Alu -5 308 1 1716 135 50 130 chr2 160836726 160836987 -89850867 + Tigger3(Golem) DNA MER2_type 125 3028 0 4362 129 34 7 chr2 160838467 160839181 -89848673 + L1MA5 LINE L1 5568 6300 0 230 287 28 46 chr2 160840045 160840153 -89847701 + MIR3 SINE MIR 82 187 -21 303 146 0 0 chr2 160840176 160840231 -89847623 - Alu SINE Alu 0 302 248 246 283 109 14 chr2 160840322 160840460 -89847394 - MIR SINE MIR -54 208 58 1065 158 0 18 chr2 160840808 160840979 -89846875 - FRAM SINE Alu -7 169 2 1963 153 14 83 chr2 160843034 160843407 -89844447 - MLT1B LTR MaLR 0 390 -7 2098 143 22 25 chr2 160843407 160843772 -89844082 - THE1B LTR MaLR 0 364 1 11436 107 11 2 chr2 160843772 160845337 -89842517 - THE1B-int LTR MaLR 0 1580 1 2018 124 19 62 chr2 160845337 160845708 -89842146 - THE1A LTR MaLR 0 355 1 1963 153 14 83 chr2 160845708 160845751 -89842103 - MLT1B LTR MaLR -345 45 1 2454 80 0 0 chr2 160845855 160846154 -89841700 - AluY SINE Alu -12 299 1 21 0 0 0 chr2 160846973 160846994 -89840860 + AT_rich Low_complexity Low_complexity 1 21 0 1349 60 0 0 chr2 160847000 160847168 -89840686 + L1PA8 LINE L1 6005 6172 0 1538 160 32 7 chr2 160847756 160848038 -89839816 - L1MB4 LINE L1 -6 6174 5886 746 230 20 56 chr2 160848223 160848475 -89839379 - MIR SINE MIR 0 262 20 511 249 55 36 chr2 160848613 160848778 -89839076 - Charlie8 DNA MER1_type -2226 191 24 587 91 0 0 chr2 160848937 160849025 -89838829 - Alu SINE Alu 0 310 223 720 127 42 8 chr2 160849027 160849145 -89838709 - AluJb SINE Alu -138 174 53 2105 112 13 39 chr2 160849394 160849706 -89838148 - AluSx SINE Alu -8 304 1 200 310 0 28 chr2 160849816 160849887 -89837967 - MIR SINE MIR 0 262 194 952 188 0 36 chr2 160850731 160850897 -89836957 + FAM SINE Alu 1 54 0 250 33 0 0 chr2 160850897 160850927 -89836927 + (GAAA)n Simple_repeat Simple_repeat 3 160 0 2043 130 27 0 chr2 160851744 160852037 -89835817 + AluSx SINE Alu 1 301 -11 204 333 159 0 chr2 160852217 160852286 -89835568 - L2 LINE L2 -48 3224 3145 1720 176 7 7 chr2 160852622 160852923 -89834931 - AluJb SINE Alu -11 301 1 2148 120 0 17 chr2 160852967 160853267 -89834587 + AluSx SINE Alu 1 295 -17 263 98 0 0 chr2 160853410 160853451 -89834403 - L1MA9 LINE L1 -38 6274 6234 2723 164 50 47 chr2 160853478 160853756 -89834098 + MER7C DNA MER2_type 46 321 -2707 2314 109 0 0 chr2 160853756 160854049 -89833805 + AluSx SINE Alu 5 297 -15 2723 164 50 47 chr2 160854049 160854325 -89833529 + MER7C DNA MER2_type 321 602 0 344 233 0 0 chr2 160854331 160854404 -89833450 - L1MA9 LINE L1 -71 6241 6169 841 108 36 12 chr2 160854405 160854571 -89833283 + CT-rich Low_complexity Low_complexity 4 173 0 687 219 12 18 chr2 160854571 160854735 -89833119 - L1MA9 LINE L1 -147 6165 6003 274 265 152 8 chr2 160854739 160854871 -89832983 - L1MC5 LINE L1 -187 7774 7624 1790 164 10 3 chr2 160855210 160855515 -89832339 - AluJo SINE Alu -5 307 1 1034 140 37 0 chr2 160855778 160855942 -89831912 - MSTC LTR MaLR -12 416 247 3617 232 29 60 chr2 160855955 160856320 -89831534 - MSTD-int LTR MaLR -802 933 558 778 126 0 0 chr2 160856320 160856423 -89831431 - U6 snRNA snRNA -2 105 3 3617 232 29 60 chr2 160856423 160857019 -89830835 - MSTD-int LTR MaLR -1177 558 2 988 203 131 75 chr2 160857022 160857396 -89830458 - MSTD LTR MaLR -1 395 1 2125 139 0 0 chr2 160857408 160857703 -89830151 - AluSq SINE Alu -18 295 1 2623 156 30 76 chr2 160857820 160858064 -89829790 - L1MB1 LINE L1 -5 6163 5909 1343 183 59 22 chr2 160858064 160858337 -89829517 - AluJo SINE Alu -28 284 2 2623 156 30 76 chr2 160858337 160858668 -89829186 - L1MB1 LINE L1 -259 5909 5615 1473 199 25 7 chr2 160858859 160859140 -89828714 - AluJo SINE Alu -23 289 4 765 183 0 0 chr2 160859155 160859270 -89828584 - FLAM_C SINE Alu -27 116 2 220 218 30 30 chr2 160863231 160863332 -89824522 + (CA)n Simple_repeat Simple_repeat 1 101 0 473 236 140 25 chr2 160863751 160863908 -89823946 - MER5B DNA MER1_type -1 177 3 25336 57 7 3 chr2 160865713 160869580 -89818274 - L1PA6 LINE L1 -11 6143 2266 10764 129 9 21 chr2 160869581 160871271 -89816583 - L1PA6 LINE L1 -4476 1670 1 181 315 19 0 chr2 160872980 160873034 -89814820 + L2 LINE L2 3211 3265 -7 1621 127 53 46 chr2 160873501 160873784 -89814070 + AluJo SINE Alu 2 286 -26 1684 112 116 8 chr2 160874520 160874787 -89813067 + AluSx SINE Alu 1 296 -16 396 306 93 81 chr2 160875762 160875933 -89811921 + L2 LINE L2 1868 2036 -1278 1964 146 0 16 chr2 160875933 160876248 -89811606 - AluJb SINE Alu -2 310 1 396 306 93 81 chr2 160876248 160876678 -89811176 + L2 LINE L2 2036 2476 -838 491 168 32 11 chr2 160876761 160876856 -89810998 + MER4A LTR ERV1 2 98 -566 1837 108 32 28 chr2 160876856 160877200 -89810654 + MER4A LTR ERV1 261 664 0 240 325 83 30 chr2 160877303 160877472 -89810382 - MIR SINE MIR -34 228 51 905 128 0 0 chr2 160878151 160878276 -89809578 - FLAM_C SINE Alu -18 125 1 351 226 71 0 chr2 160878851 160878935 -89808919 + MER5A DNA MER1_type 79 168 -21 1253 184 139 38 chr2 160879481 160879748 -89808106 - AluJo SINE Alu -8 294 1 482 208 50 0 chr2 160879950 160880051 -89807803 + MIR SINE MIR 83 188 -74 23 0 0 0 chr2 160880331 160880354 -89807500 + AT_rich Low_complexity Low_complexity 1 23 0 381 22 0 0 chr2 160881010 160881056 -89806798 + (TG)n Simple_repeat Simple_repeat 2 47 0 835 167 0 83 chr2 160881829 160881997 -89805857 + MSTD LTR MaLR 243 396 0 * 1321 220 122 17 chr2 160881997 160882414 -89805440 + Charlie4a DNA MER1_type 38 498 -10 615 222 169 0 chr2 160883549 160883738 -89804116 + MIR SINE MIR 27 247 -15 227 255 32 75 chr2 160883745 160883839 -89804015 + MER5B DNA MER1_type 17 106 -72 186 200 80 20 chr2 160884241 160884291 -89803563 - MIR3 SINE MIR -7 201 149 192 324 56 0 chr2 160884839 160884910 -89802944 + MIR SINE MIR 18 92 -170 234 0 0 0 chr2 160885237 160885263 -89802591 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2248 102 0 13 chr2 160885667 160885980 -89801874 - AluY SINE Alu -2 309 1 659 138 147 0 chr2 160886464 160886580 -89801274 - FLAM_C SINE Alu 0 133 1 184 363 0 12 chr2 160886849 160886929 -89800925 + MIR SINE MIR 43 121 -87 243 0 0 0 chr2 160888181 160888208 -89799646 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1449 200 22 35 chr2 160888586 160888901 -89798953 + AluJb SINE Alu 1 311 -1 378 0 0 0 chr2 160889254 160889296 -89798558 + (TG)n Simple_repeat Simple_repeat 1 42 0 220 226 48 12 chr2 160889296 160889380 -89798474 + T-rich Low_complexity Low_complexity 5 91 0 191 265 122 20 chr2 160889986 160890084 -89797770 - L2 LINE L2 -10 3262 3155 329 226 29 49 chr2 160890625 160890727 -89797127 + LTR48B LTR ERV1 1 100 -544 * 2005 188 92 12 chr2 160890701 160891116 -89796738 + MER39 LTR ERV1 260 707 0 2399 103 3 0 chr2 160891321 160891633 -89796221 + AluSq SINE Alu 1 313 0 2886 19 0 0 chr2 160892051 160892365 -89795489 + AluYb8 SINE Alu 1 314 -4 370 288 90 0 chr2 160893901 160894012 -89793842 + MIR SINE MIR 33 153 -55 249 267 27 13 chr2 160894240 160894315 -89793539 + C-rich Low_complexity Low_complexity 5 80 0 1810 139 3 30 chr2 160895490 160895792 -89792062 + AluJo SINE Alu 1 294 -18 1995 119 7 11 chr2 160898118 160898404 -89789450 - AluSx SINE Alu -26 286 2 189 344 137 38 chr2 160898702 160898885 -89788969 - L3b LINE CR1 -4 1579 1379 284 239 104 60 chr2 160899025 160899130 -89788724 + L1M4 LINE L1 4327 4426 -1720 1624 142 35 76 chr2 160899130 160899446 -89788408 - AluJb SINE Alu -9 303 1 284 239 104 60 chr2 160899446 160899615 -89788239 + L1M4 LINE L1 4426 4619 -1527 1870 132 62 10 chr2 160899615 160899919 -89787935 - L1MC1 LINE L1 0 6333 6014 284 239 104 60 chr2 160899919 160899961 -89787893 + L1M4 LINE L1 4619 4658 -1488 283 253 12 24 chr2 160900009 160900092 -89787762 - LTR67 LTR ERVL -379 178 97 2095 139 0 7 chr2 160901336 160901646 -89786208 - AluSx SINE Alu -4 308 1 236 355 0 21 chr2 160901748 160901841 -89786013 + MIR SINE MIR 20 110 -152 1019 60 0 0 chr2 160902010 160902144 -89785710 + L1PA4 LINE L1 6022 6155 0 1307 198 83 52 chr2 160904076 160904439 -89783415 - MLT1A2 LTR MaLR 0 374 1 1704 187 0 35 chr2 160904651 160904966 -89782888 + AluJb SINE Alu 2 305 -7 403 303 125 29 chr2 160905060 160905515 -89782339 - L1ME LINE L1 -314 5807 5309 1017 188 11 0 chr2 160906442 160906623 -89781231 - AluJo SINE Alu -31 281 99 758 279 136 10 chr2 160907044 160907435 -89780419 - L1MC/D LINE L1 -2007 5801 5362 517 206 284 0 chr2 160907436 160907591 -89780263 + MIR SINE MIR 37 235 -27 717 203 0 15 chr2 160908561 160908694 -89779160 - FLAM_A SINE Alu -2 131 1 189 0 0 0 chr2 160908711 160908732 -89779122 + (T)n Simple_repeat Simple_repeat 1 21 0 306 318 45 0 chr2 160908802 160908890 -89778964 - MIR SINE MIR -150 112 21 270 238 25 25 chr2 160908910 160908990 -89778864 + MIR SINE MIR 116 195 -67 207 152 0 0 chr2 160911391 160911437 -89776417 + (CCCTG)n Simple_repeat Simple_repeat 3 48 0 246 250 0 0 chr2 160911754 160911810 -89776044 + MIR SINE MIR 207 262 0 2004 136 3 40 chr2 160912296 160912619 -89775235 - AluSx SINE Alu -1 311 1 22 35 0 0 chr2 160912619 160912648 -89775206 + AT_rich Low_complexity Low_complexity 1 29 0 2298 98 0 0 chr2 160913334 160913629 -89774225 + AluSg SINE Alu 1 295 -15 511 271 32 13 chr2 160914212 160914367 -89773487 + MIR SINE MIR 2 159 -103 1781 151 58 0 chr2 160914439 160914751 -89773103 + MSTB2 LTR MaLR 122 451 -6 207 216 0 95 chr2 160914757 160914831 -89773023 + MIR SINE MIR 196 262 0 2073 160 118 3 chr2 160914858 160915240 -89772614 - MSTB LTR MaLR 0 426 1 21 36 0 0 chr2 160916030 160916058 -89771796 + AT_rich Low_complexity Low_complexity 1 28 0 301 315 56 43 chr2 160916666 160916828 -89771026 - HAL1b LINE L1 -738 610 447 922 212 0 0 chr2 160916859 160917038 -89770816 - AluJb SINE Alu -1 311 133 1805 231 54 7 chr2 160917087 160917532 -89770322 + MLT1C LTR MaLR 2 467 0 1489 97 65 5 chr2 160917941 160918158 -89769696 - MER30 DNA MER1_type 0 230 1 192 179 0 0 chr2 160919574 160919613 -89768241 + (CATATA)n Simple_repeat Simple_repeat 5 43 0 283 307 34 0 chr2 160919764 160919852 -89768002 + MER5B DNA MER1_type 3 93 -85 742 217 29 24 chr2 160920545 160920752 -89767102 + MIR SINE MIR 28 235 -27 340 257 14 0 chr2 160922107 160922181 -89765673 + MER58 DNA MER1_type 2345 2419 -1 2205 125 0 6 chr2 160924294 160924606 -89763248 - AluSg SINE Alu 0 310 1 2406 80 10 0 chr2 160924817 160925117 -89762737 + AluSg SINE Alu 1 303 -7 3036 126 51 38 chr2 160925779 160926327 -89761527 - LTR10A LTR ERV1 -54 555 1 22 35 0 0 chr2 160927322 160927351 -89760503 + AT_rich Low_complexity Low_complexity 1 29 0 2012 155 35 18 chr2 160927491 160927833 -89760021 + MER7A DNA MER2_type 1 346 0 228 35 0 0 chr2 160928859 160928888 -89758966 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2207 154 85 40 chr2 160928891 160929340 -89758514 + MER31A LTR ERV1 12 480 -5 22 0 0 0 chr2 160930225 160930247 -89757607 + AT_rich Low_complexity Low_complexity 1 22 0 1867 134 6 51 chr2 160931640 160931953 -89755901 - AluJb SINE Alu -13 299 1 2431 86 3 0 chr2 160932072 160932376 -89755478 - AluY SINE Alu -6 305 1 637 126 63 0 chr2 160932441 160932552 -89755302 - L1MB2 LINE L1 -1 6170 6053 548 262 24 53 chr2 160932559 160932765 -89755089 - L1ME LINE L1 -421 5700 5501 245 312 51 36 chr2 160933018 160933156 -89754698 - MIR3 SINE MIR -2 206 67 621 274 0 30 chr2 160933686 160933854 -89754000 - MER5B DNA MER1_type -15 163 1 1814 135 7 53 chr2 160933917 160934221 -89753633 - AluJb SINE Alu -22 290 1 2673 58 0 0 chr2 160934341 160934652 -89753202 - AluY SINE Alu 0 311 1 630 127 64 0 chr2 160934716 160934826 -89753028 - L1MB2 LINE L1 -2 6169 6053 234 273 13 39 chr2 160934833 160934910 -89752944 - L1ME LINE L1 -421 5700 5626 2938 182 45 72 chr2 160935458 160936370 -89751484 - L1MB7 LINE L1 0 6184 5174 2041 119 3 7 chr2 160936370 160936685 -89751169 - AluSx SINE Alu 0 314 1 2938 182 45 72 chr2 160936685 160936980 -89750874 - L1MB7 LINE L1 -1010 5174 4873 845 217 44 30 chr2 160938699 160938902 -89748952 + MLT1A2 LTR MaLR 1 206 -168 3915 174 35 8 chr2 160938907 160939613 -89748241 + Tigger7 DNA MER2_type 25 749 -1738 571 159 65 28 chr2 160939611 160939718 -89748136 + Tigger7 DNA MER2_type 2381 2491 0 * 562 167 87 29 chr2 160939718 160939840 -89748014 + MLT1A2 LTR MaLR 211 340 -25 870 134 0 8 chr2 160939847 160939974 -89747880 - AluJb SINE Alu -186 126 1 1995 142 0 28 chr2 160941597 160941915 -89745939 - AluSx SINE Alu -3 309 1 1727 160 6 49 chr2 160941915 160942240 -89745614 - AluJo SINE Alu -1 311 1 1515 143 39 80 chr2 160942316 160942602 -89745252 - AluJb SINE Alu -23 289 16 248 253 102 48 chr2 160942706 160942872 -89744982 + MIR SINE MIR 40 214 -48 545 231 16 8 chr2 160943077 160943198 -89744656 + FLAM_A SINE Alu 1 122 -11 209 316 44 44 chr2 160944336 160944450 -89743404 - L2 LINE L2 -20 3252 3139 375 60 0 0 chr2 160944531 160944581 -89743273 + (TG)n Simple_repeat Simple_repeat 2 51 0 2225 113 0 7 chr2 160945504 160945830 -89742024 + AluSg SINE Alu 1 310 0 1204 188 10 0 chr2 160945881 160946089 -89741765 - MER58A DNA MER1_type -8 216 7 244 293 49 32 chr2 160946191 160946314 -89741540 - MIR SINE MIR -111 151 27 1531 183 47 116 chr2 160946585 160946754 -89741100 - L1MC3 LINE L1 0 7785 7606 2508 60 0 3 chr2 160946754 160947054 -89740800 - AluY SINE Alu -12 299 1 1531 183 47 116 chr2 160947054 160947757 -89740097 - L1MC3 LINE L1 -179 7606 7038 25 0 0 0 chr2 160949693 160949718 -89738136 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 160949919 160949944 -89737910 + AT_rich Low_complexity Low_complexity 1 25 0 1656 144 27 19 chr2 160949980 160950236 -89737618 - AluJb SINE Alu -54 258 1 487 215 156 7 chr2 160950266 160950401 -89737453 - MLT1D LTR MaLR -350 155 1 385 261 85 76 chr2 160950419 160950630 -89737224 - MLT1J LTR MaLR -201 310 98 1882 134 36 0 chr2 160950683 160950958 -89736896 - AluSq SINE Alu -27 286 2 311 185 46 85 chr2 160951076 160951206 -89736648 - LTR37A LTR ERV1 -264 162 38 2015 153 0 0 chr2 160951272 160951573 -89736281 - AluJb SINE Alu -11 301 1 889 219 129 22 chr2 160951790 160952101 -89735753 - L1ME1 LINE L1 -15 6151 5808 733 207 47 0 chr2 160952099 160952268 -89735586 - L1M3 LINE L1 -573 5610 5431 * 266 268 22 112 chr2 160954966 160955145 -89732709 + L3 LINE CR1 901 1063 -514 462 161 12 0 chr2 160955280 160955361 -89732493 + AluJ/FLAM SINE Alu 4 85 -227 329 281 68 52 chr2 160955552 160955769 -89732085 + MIR SINE MIR 3 224 -38 962 152 24 24 chr2 160956340 160956504 -89731350 - AluJb SINE Alu -20 292 129 274 276 86 109 chr2 160956763 160956909 -89730945 - LTR67 LTR ERVL 0 557 409 2021 145 30 0 chr2 160956909 160957206 -89730648 + AluJb SINE Alu 1 306 -6 274 276 86 109 chr2 160957206 160957527 -89730327 - LTR67 LTR ERVL -148 409 101 853 225 6 11 chr2 160957702 160957880 -89729974 - MER45A DNA AcHobo 0 178 2 1328 179 25 4 chr2 160958156 160958436 -89729418 - L1MB4 LINE L1 -155 6025 5740 2444 77 0 0 chr2 160958451 160958750 -89729104 - AluY SINE Alu -12 299 1 990 82 0 0 chr2 160958834 160958956 -89728898 - AluSg SINE Alu -187 123 2 1000 161 0 0 chr2 160959017 160959198 -89728656 - AluSg/x SINE Alu 0 301 121 2228 119 3 0 chr2 160959313 160959616 -89728238 - AluSq SINE Alu -9 304 1 458 244 0 0 chr2 160959619 160959709 -89728145 - AluJ/FLAM SINE Alu -222 90 1 185 320 18 146 chr2 160960793 160961012 -89726842 + L2 LINE L2 2992 3182 -90 309 298 39 19 chr2 160961113 160961217 -89726637 - L2 LINE L2 -4 3309 3204 240 314 86 69 chr2 160961215 160961390 -89726464 - L2 LINE L2 -235 3037 2860 * 21 71 0 0 chr2 160961499 160961541 -89726313 + AT_rich Low_complexity Low_complexity 1 42 0 2000 141 0 23 chr2 160962433 160962737 -89725117 - AluSx SINE Alu -15 297 1 1658 165 70 0 chr2 160962945 160963217 -89724637 + AluJo SINE Alu 1 291 -21 219 309 59 52 chr2 160965142 160965278 -89722576 + MIR3 SINE MIR 2 138 -70 5641 142 30 7 chr2 160965402 160966439 -89721415 - L1MC2 LINE L1 0 6344 5284 1759 231 65 14 chr2 160966687 160967206 -89720648 + L1MC4a LINE L1 7255 7800 -8 324 315 102 76 chr2 160967251 160967673 -89720181 + L1M2 LINE L1 528 960 -5889 252 268 195 8 chr2 160969062 160969185 -89718669 + MIR SINE MIR 86 231 -31 338 283 200 23 chr2 160969809 160970191 -89717663 + L2 LINE L2 2785 3244 -69 2451 91 0 0 chr2 160970380 160970688 -89717166 - AluSg SINE Alu -2 308 1 1912 152 0 14 chr2 160971034 160971372 -89716482 - AluJb SINE Alu 0 334 1 193 333 56 44 chr2 160972289 160972379 -89715475 - L3 LINE CR1 -35 1542 1452 342 147 59 15 chr2 160972630 160972698 -89715156 - Tigger5 DNA MER2_type 0 2323 2253 405 0 0 0 chr2 160972883 160972928 -89714926 + (CA)n Simple_repeat Simple_repeat 2 46 0 277 0 0 53 chr2 160972931 160972969 -89714885 + MLT2B2 LTR ERVL 480 515 0 1890 214 37 9 chr2 160972970 160973401 -89714453 + MLT1F LTR MaLR 100 542 0 419 275 0 30 chr2 160973401 160973532 -89714322 + L2 LINE L2 3139 3265 -48 470 232 116 45 chr2 160973538 160973693 -89714161 - MIR SINE MIR -84 178 13 215 288 15 0 chr2 160974680 160974746 -89713108 + GA-rich Low_complexity Low_complexity 3 69 0 252 236 0 0 chr2 160974883 160974938 -89712916 - L2 LINE L2 -1 3312 3258 * 445 378 67 30 chr2 160974931 160975262 -89712592 + L2 LINE L2 2928 3270 -2 334 302 119 20 chr2 160975737 160976047 -89711807 + L1ME3A LINE L1 786 1069 -5149 1721 129 82 25 chr2 160976049 160976328 -89711526 + AluJo SINE Alu 1 295 -17 444 289 67 49 chr2 160976422 160976768 -89711086 + L1ME3A LINE L1 1040 1542 -4826 1657 158 42 33 chr2 160976801 160977131 -89710723 - MER7A DNA MER2_type -14 332 2 413 317 28 36 chr2 160977145 160977219 -89710635 + L1ME3A LINE L1 1574 1647 -4749 2193 88 37 7 chr2 160977219 160977516 -89710338 - AluSx SINE Alu -4 308 3 413 317 28 36 chr2 160977516 160977690 -89710164 + L1ME3A LINE L1 1647 1820 -4576 546 243 88 40 chr2 160977716 160978115 -89709739 + L1ME3A LINE L1 1930 2347 -4049 589 212 163 5 chr2 160978116 160978300 -89709554 + L1ME3A LINE L1 5627 5839 -400 848 178 114 111 chr2 160978337 160978635 -89709219 + L1ME3A LINE L1 5936 6234 -5 2430 88 0 0 chr2 160978717 160979024 -89708830 + AluSx SINE Alu 1 307 -5 290 364 51 8 chr2 160979126 160979244 -89708610 - L2 LINE L2 0 3272 3150 359 293 185 10 chr2 160979272 160979477 -89708377 - MIR SINE MIR -2 260 20 327 209 127 22 chr2 160979728 160979862 -89707992 - HAL1 LINE L1 -2118 389 242 1880 158 7 7 chr2 160980080 160980378 -89707476 + AluJo SINE Alu 5 302 -10 2089 146 0 0 chr2 160980695 160981004 -89706850 + AluJb SINE Alu 1 309 -3 582 279 90 30 chr2 160982214 160982447 -89705407 - MIR SINE MIR -14 248 2 1855 152 31 3 chr2 160982611 160982900 -89704954 - AluJo SINE Alu -15 297 1 2089 94 9 44 chr2 160982911 160983230 -89704624 - AluY SINE Alu -3 308 1 954 143 0 0 chr2 160983233 160983366 -89704488 - AluSq/x SINE Alu -180 133 1 215 200 0 18 chr2 160983703 160983758 -89704096 + CT-rich Low_complexity Low_complexity 3 56 0 1991 135 51 0 chr2 160983764 160983939 -89703915 - AluSx SINE Alu -1 311 113 192 40 0 0 chr2 160983939 160983964 -89703890 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1991 135 51 0 chr2 160983964 160984084 -89703770 - AluSx SINE Alu -199 113 1 1424 184 99 0 chr2 160985448 160985720 -89702134 + AluJb SINE Alu 1 299 -13 2419 81 0 3 chr2 160986093 160986400 -89701454 - AluSg SINE Alu -4 306 1 237 156 57 19 chr2 160986543 160986637 -89701217 + AluSc SINE Alu 1 125 -177 1430 231 107 11 chr2 160987576 160988127 -89699727 - L1ME2 LINE L1 -241 5923 5320 1546 158 24 4 chr2 160988129 160988376 -89699478 - AluJb SINE Alu -60 252 1 1322 94 11 11 chr2 160988461 160988652 -89699202 + AluSg/x SINE Alu 119 309 -3 1866 157 50 55 chr2 160988776 160989197 -89698657 + L1MB3 LINE L1 5476 5894 -289 570 96 0 37 chr2 160989197 160989464 -89698390 + AluSx SINE Alu 1 310 0 735 193 124 27 chr2 160989464 160989710 -89698144 + L1MB3 LINE L1 5882 6158 -16 299 260 130 31 chr2 160989724 160989916 -89697938 + HAL1 LINE L1 2296 2506 -1 206 254 0 18 chr2 160990034 160990089 -89697765 + (TATATG)n Simple_repeat Simple_repeat 5 58 0 581 249 110 91 chr2 160990089 160990398 -89697456 - L2 LINE L2 -19 3294 2980 246 275 55 33 chr2 160990377 160990468 -89697386 + L3 LINE CR1 1261 1353 -224 * 262 218 151 0 chr2 160990715 160990819 -89697035 + MIR SINE MIR 3 124 -84 200 299 69 11 chr2 160991306 160991393 -89696461 - L2 LINE L2 -1394 1920 1829 1294 170 26 0 chr2 160992036 160992265 -89695589 + AluSx SINE Alu 1 235 -77 22 0 0 0 chr2 160992580 160992602 -89695252 + AT_rich Low_complexity Low_complexity 1 22 0 725 166 140 4 chr2 160994484 160994740 -89693114 - MER7A DNA MER2_type -1 335 25 743 189 141 11 chr2 160995338 160995523 -89692331 - MER3 DNA MER1_type 0 209 1 1796 159 0 11 chr2 160995706 160995989 -89691865 - AluSx SINE Alu -32 280 1 26 64 0 0 chr2 160997384 160997431 -89690423 + AT_rich Low_complexity Low_complexity 1 47 0 212 220 20 0 chr2 160997854 160997904 -89689950 + (TA)n Simple_repeat Simple_repeat 2 52 0 21 57 0 0 chr2 161000890 161000925 -89686929 + AT_rich Low_complexity Low_complexity 1 35 0 396 0 0 0 chr2 161001094 161001138 -89686716 + (CA)n Simple_repeat Simple_repeat 1 44 0 750 236 99 58 chr2 161003005 161003435 -89684419 - LTR56 LTR ERV1 0 437 11 2344 107 10 0 chr2 161003639 161003948 -89683906 + AluSq SINE Alu 1 312 -1 2142 91 20 7 chr2 161004027 161004323 -89683531 + AluSq SINE Alu 1 300 -13 284 0 0 27 chr2 161004604 161004641 -89683213 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 994 179 30 15 chr2 161005128 161005329 -89682525 + L1MB5 LINE L1 5891 6094 -80 708 160 16 24 chr2 161005400 161005525 -89682329 - FLAM_C SINE Alu -10 133 10 23 0 0 0 chr2 161005828 161005851 -89682003 + AT_rich Low_complexity Low_complexity 1 23 0 1447 173 67 20 chr2 161006660 161007002 -89680852 + L1MB4 LINE L1 5804 6161 -19 290 297 45 27 chr2 161007219 161007330 -89680524 - L2 LINE L2 -4 3268 3156 718 233 55 0 chr2 161007699 161007862 -89679992 - AluJb SINE Alu -21 291 120 2081 119 3 17 chr2 161008153 161008455 -89679399 + AluSx SINE Alu 1 298 -14 267 256 128 45 chr2 161008456 161008589 -89679265 - MIR SINE MIR -5 257 114 * 346 237 25 68 chr2 161008582 161008636 -89679218 + MER5B DNA MER1_type 66 121 -57 2435 87 0 3 chr2 161008636 161008946 -89678908 - AluSx SINE Alu -3 309 1 346 237 25 68 chr2 161008946 161009009 -89678845 + MER5B DNA MER1_type 121 178 0 267 330 0 36 chr2 161009009 161009120 -89678734 - MIR SINE MIR -155 107 1 269 250 95 0 chr2 161009199 161009283 -89678571 - MIR SINE MIR -2 260 169 439 332 62 22 chr2 161009667 161009893 -89677961 + L2 LINE L2 263 497 -2817 2839 286 189 31 chr2 161009900 161011787 -89676067 + L2 LINE L2 607 2880 -433 2156 47 77 4 chr2 161011787 161012061 -89675793 - AluY SINE Alu -17 294 1 2839 286 189 31 chr2 161012061 161012280 -89675574 + L2 LINE L2 2880 3063 -250 210 247 13 78 chr2 161012297 161012374 -89675480 + L2 LINE L2 3181 3252 -20 2137 108 4 0 chr2 161014800 161015105 -89672749 - AluSc SINE Alu 0 306 1 837 153 0 0 chr2 161015145 161015269 -89672585 + FLAM_C SINE Alu 1 124 -19 2058 120 18 0 chr2 161015704 161016023 -89671831 + AluSq SINE Alu 2 325 0 2289 116 3 0 chr2 161016073 161016384 -89671470 + AluSx SINE Alu 1 312 0 2089 141 3 0 chr2 161018650 161018955 -89668899 + AluSq SINE Alu 1 306 -7 2069 106 3 3 chr2 161019674 161019977 -89667877 - AluSx SINE Alu 0 303 1 228 321 12 24 chr2 161020950 161021034 -89666820 - MIR SINE MIR -68 140 58 2693 13 7 3 chr2 161021063 161021373 -89666481 + AluYa5 SINE Alu 1 311 0 1457 170 0 38 chr2 161021425 161021690 -89666164 - AluJo SINE Alu -16 296 42 2134 105 31 0 chr2 161022397 161022683 -89665171 - AluSg SINE Alu -15 295 1 1635 169 86 0 chr2 161023978 161024256 -89663598 - AluJo SINE Alu -10 302 1 916 143 0 29 chr2 161024313 161024453 -89663401 - AluJo SINE Alu -176 136 1 22 35 0 0 chr2 161024838 161024867 -89662987 + AT_rich Low_complexity Low_complexity 1 29 0 416 219 219 0 chr2 161025847 161025993 -89661861 - L1M4 LINE L1 -439 5745 5568 6148 184 88 21 chr2 161026016 161027456 -89660398 + MER52A LTR ERV1 1 1743 -12 1348 146 75 26 chr2 161027464 161027545 -89660309 - L1M4 LINE L1 -611 5563 5487 1694 152 13 36 chr2 161027545 161027847 -89660007 - AluJo SINE Alu -17 295 1 1348 146 75 26 chr2 161027847 161028186 -89659668 - L1M4 LINE L1 -687 5487 5123 252 54 0 0 chr2 161028378 161028415 -89659439 + L1MB8 LINE L1 6130 6166 -12 3191 174 96 43 chr2 161028756 161029222 -89658632 + L1MB8 LINE L1 5167 5607 -571 1487 218 7 0 chr2 161029222 161029502 -89658352 - AluJo SINE Alu -30 282 1 3191 174 96 43 chr2 161029502 161029986 -89657868 + L1MB8 LINE L1 5607 6172 -6 1718 162 7 40 chr2 161030356 161030659 -89657195 - AluJb SINE Alu -19 293 1 1426 221 11 3 chr2 161031811 161032096 -89655758 + AluJo SINE Alu 1 287 -25 250 188 12 38 chr2 161032240 161032320 -89655534 + (TAA)n Simple_repeat Simple_repeat 2 79 0 189 200 0 50 chr2 161032330 161032370 -89655484 - L2 LINE L2 -25 3288 3251 * 264 279 39 29 chr2 161032340 161032444 -89655410 - MIR SINE MIR -27 235 131 1460 175 0 68 chr2 161032517 161032825 -89655029 + AluJo SINE Alu 1 287 -25 24 77 0 0 chr2 161033006 161033058 -89654796 + AT_rich Low_complexity Low_complexity 1 52 0 2550 68 0 0 chr2 161033215 161033526 -89654328 - AluY SINE Alu 0 311 1 2266 89 3 3 chr2 161033584 161033877 -89653977 - AluSp SINE Alu -20 293 1 26 30 0 0 chr2 161034002 161034035 -89653819 + AT_rich Low_complexity Low_complexity 1 33 0 299 305 181 40 chr2 161034040 161034157 -89653697 - MIR SINE MIR 0 262 163 1762 169 6 13 chr2 161034157 161034470 -89653384 + AluJb SINE Alu 1 311 -1 299 305 181 40 chr2 161034470 161034578 -89653276 - MIR SINE MIR -99 163 5 690 211 16 8 chr2 161035149 161035277 -89652577 + FLAM_A SINE Alu 1 129 -4 1487 150 39 18 chr2 161035664 161035950 -89651904 - AluSx SINE Alu -19 293 2 229 167 42 0 chr2 161035971 161036019 -89651835 + MER46C DNA MER2_type 2 51 -287 187 250 0 39 chr2 161036918 161036970 -89650884 + MIR SINE MIR 199 248 -14 * 199 231 0 19 chr2 161036938 161036990 -89650864 + L2 LINE L2 3262 3312 -1 665 235 43 32 chr2 161037044 161037231 -89650623 - MIR SINE MIR -3 259 71 814 238 57 16 chr2 161037469 161037717 -89650137 - L1ME3A LINE L1 -217 5953 5696 2330 78 0 3 chr2 161037741 161038034 -89649820 - AluY SINE Alu -19 292 1 845 123 0 32 chr2 161038085 161038239 -89649615 - L1MB3 LINE L1 -250 5933 5785 1282 169 77 0 chr2 161038239 161038500 -89649354 - MER7A DNA MER2_type -1 345 67 773 172 133 16 chr2 161038500 161038734 -89649120 + L1MB3 LINE L1 5946 6181 -2 2178 85 0 0 chr2 161038778 161039121 -89648733 + AluY SINE Alu 1 343 0 988 263 124 48 chr2 161039517 161039721 -89648133 + HAL1 LINE L1 792 979 -1528 6906 64 6 1 chr2 161039721 161040649 -89647205 + L1PA5 LINE L1 5215 6146 -8 988 263 124 48 chr2 161040649 161041350 -89646504 + HAL1 LINE L1 979 1766 -741 23 0 0 0 chr2 161041538 161041561 -89646293 + AT_rich Low_complexity Low_complexity 1 23 0 357 261 6 62 chr2 161041719 161041880 -89645974 + HAL1 LINE L1 2297 2448 -59 434 277 0 17 chr2 161041913 161042032 -89645822 - MER94 DNA DNA -14 120 4 2035 125 20 3 chr2 161042906 161043209 -89644645 + AluSx SINE Alu 1 308 -4 382 250 100 0 chr2 161043458 161043558 -89644296 + MER45B DNA AcHobo 59 168 -872 276 250 100 0 chr2 161043621 161043701 -89644153 + MER45B DNA AcHobo 329 416 -624 1815 135 7 38 chr2 161044175 161044463 -89643391 + AluSg SINE Alu 1 279 -31 326 375 22 5 chr2 161044504 161044688 -89643166 + L1MEd LINE L1 484 670 -5449 265 241 72 0 chr2 161044926 161045009 -89642845 + L1MC4 LINE L1 7477 7565 -477 2082 111 0 0 chr2 161045016 161045295 -89642559 + AluSg SINE Alu 1 279 -31 816 253 116 23 chr2 161045303 161045647 -89642207 + L1MCc LINE L1 1041 1416 -5007 636 134 134 0 chr2 161046009 161046121 -89641733 + FLAM_C SINE Alu 1 127 -16 1126 127 76 35 chr2 161046140 161046337 -89641517 + AluSg/x SINE Alu 80 284 -26 29 28 0 0 chr2 161046970 161047006 -89640848 + AT_rich Low_complexity Low_complexity 1 36 0 353 262 79 27 chr2 161047131 161047296 -89640558 + MIR SINE MIR 53 262 0 226 153 118 35 chr2 161047820 161047905 -89639949 - L1MC5 LINE L1 -36 7925 7834 257 250 29 19 chr2 161048019 161048123 -89639731 + MLT1H LTR MaLR 13 117 -432 283 281 128 25 chr2 161048259 161048462 -89639392 + MLT1H1 LTR MaLR 321 544 -11 1990 128 24 10 chr2 161048685 161048975 -89638879 - AluJb SINE Alu -18 294 1 1337 159 112 28 chr2 161049696 161049947 -89637907 + AluJb SINE Alu 9 280 -32 1189 182 73 31 chr2 161050401 161050687 -89637167 - AluJo SINE Alu -2 300 3 187 382 22 44 chr2 161050887 161051023 -89636831 + L2 LINE L2 3063 3195 -77 25 65 0 0 chr2 161053093 161053139 -89634715 + GC_rich Low_complexity Low_complexity 1 46 0 204 40 0 0 chr2 161053242 161053267 -89634587 + (T)n Simple_repeat Simple_repeat 1 25 0 672 215 127 59 chr2 161054169 161054406 -89633448 + MIR SINE MIR 8 260 -2 2260 87 0 10 chr2 161054856 161055154 -89632700 + AluY SINE Alu 1 295 -16 2120 133 14 11 chr2 161055773 161056135 -89631719 - L1MA4A LINE L1 -5 6298 5936 373 86 0 43 chr2 161056135 161056205 -89631649 - AluS SINE Alu -236 67 1 1249 167 78 30 chr2 161056517 161056838 -89631016 + AluJo SINE Alu 1 334 0 980 191 83 58 chr2 161057082 161057360 -89630494 - AluJo SINE Alu -15 287 3 1953 104 0 27 chr2 161057372 161057552 -89630302 - AluSq SINE Alu -3 310 140 2227 112 0 3 chr2 161057552 161057848 -89630006 - AluSg SINE Alu -15 295 1 1953 104 0 27 chr2 161057848 161057965 -89629889 - AluSq SINE Alu -173 140 21 607 180 23 31 chr2 161057998 161058126 -89629728 - FLAM_C SINE Alu -16 127 1 32 57 0 0 chr2 161058200 161058253 -89629601 + AT_rich Low_complexity Low_complexity 1 53 0 1845 129 94 46 chr2 161058286 161058657 -89629197 - MLT2C1 LTR ERVL -8 389 1 418 188 139 20 chr2 161058663 161058764 -89629090 + MER58B DNA MER1_type 229 341 0 236 300 0 0 chr2 161058829 161058889 -89628965 + (CACG)n Simple_repeat Simple_repeat 4 63 0 201 39 0 0 chr2 161059288 161059314 -89628540 + (TG)n Simple_repeat Simple_repeat 2 27 0 225 205 26 51 chr2 161059732 161059810 -89628044 - L1 LINE L1 -1161 4985 4910 1845 156 0 32 chr2 161060081 161060396 -89627458 + AluJb SINE Alu 3 307 -5 1552 75 30 5 chr2 161060406 161060607 -89627247 + AluY SINE Alu 1 206 -105 2167 115 0 7 chr2 161060629 161060933 -89626921 + AluSq SINE Alu 9 310 -3 216 97 0 0 chr2 161060936 161060967 -89626887 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 1552 157 72 4 chr2 161061540 161061802 -89626052 - AluJo SINE Alu -21 291 12 2356 77 0 13 chr2 161062155 161062467 -89625387 - AluY SINE Alu -3 308 1 2118 123 3 0 chr2 161063198 161063483 -89624371 + AluSx SINE Alu 1 286 -26 201 119 15 45 chr2 161063488 161063555 -89624299 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 35 41 0 0 chr2 161063555 161063604 -89624250 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr2 161064259 161064280 -89623574 + AT_rich Low_complexity Low_complexity 1 21 0 1211 213 53 19 chr2 161064394 161064481 -89623373 - MER2 DNA MER2_type -15 330 247 2223 98 0 7 chr2 161064481 161064788 -89623066 + AluSg SINE Alu 1 305 -5 1211 213 53 19 chr2 161064788 161065019 -89622835 - MER2 DNA MER2_type -98 247 1 839 221 36 111 chr2 161065078 161065385 -89622469 + MLT1A1 LTR MaLR 3 286 -79 1705 180 20 7 chr2 161065671 161065965 -89621889 - AluJo SINE Alu -14 298 1 24 53 0 0 chr2 161066387 161066425 -89621429 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 161066586 161066607 -89621247 + AT_rich Low_complexity Low_complexity 1 21 0 1696 137 62 42 chr2 161066680 161066986 -89620868 - AluJo SINE Alu 0 312 1 310 305 34 26 chr2 161067190 161067324 -89620530 - MIR SINE MIR -65 143 37 2060 114 4 4 chr2 161068140 161068446 -89619408 + AluSx SINE Alu 1 306 0 2006 137 3 19 chr2 161069168 161069482 -89618372 + AluSx SINE Alu 3 311 -1 4166 180 22 58 chr2 161069482 161070860 -89616994 + L1MB7 LINE L1 4790 6127 -57 1784 144 45 45 chr2 161070860 161071236 -89616618 - MLT1B LTR MaLR 0 390 15 264 80 0 100 chr2 161071236 161071286 -89616568 + L1MB7 LINE L1 6121 6165 -19 230 143 0 0 chr2 161071253 161071295 -89616559 + L1ME2 LINE L1 6123 6164 0 * 897 171 101 6 chr2 161071357 161071515 -89616339 + FAM SINE Alu 1 173 -2 1611 174 8 0 chr2 161071537 161071801 -89616053 + AluJb SINE Alu 35 300 -12 375 234 51 82 chr2 161072002 161072132 -89615722 + L1 LINE L1 3656 3782 -2364 1138 189 64 81 chr2 161072132 161072428 -89615426 + AluJo SINE Alu 2 292 -10 375 234 51 82 chr2 161072428 161072455 -89615399 + L1 LINE L1 3782 3808 -2338 4297 146 14 38 chr2 161072455 161072519 -89615335 + Tigger2 DNA MER2_type 1 65 -2653 787 141 7 30 chr2 161072519 161072654 -89615200 - FLAM_A SINE Alu 0 133 2 4297 146 14 38 chr2 161072654 161072767 -89615087 + Tigger2 DNA MER2_type 65 179 -2539 2274 97 0 16 chr2 161072767 161073078 -89614776 + AluSx SINE Alu 1 306 -6 4297 146 14 38 chr2 161073078 161073661 -89614193 + Tigger2 DNA MER2_type 179 744 -1974 1439 129 75 0 chr2 161073735 161073975 -89613879 + Tigger2 DNA MER2_type 2461 2718 0 902 238 44 85 chr2 161073975 161074434 -89613420 + L1 LINE L1 3807 4246 -1900 453 285 7 40 chr2 161074463 161074614 -89613240 + MER58B DNA MER1_type 196 341 0 246 279 29 67 chr2 161074614 161074854 -89613000 + L1 LINE L1 4251 4481 -1665 2240 109 6 6 chr2 161075553 161075864 -89611990 + AluSx SINE Alu 1 311 -1 2411 199 113 58 chr2 161076115 161076875 -89610979 + L1MC4 LINE L1 7193 7994 -48 1470 193 55 7 chr2 161076897 161077172 -89610682 + AluJo SINE Alu 1 288 -24 2076 255 58 70 chr2 161077254 161078070 -89609784 - MER21B LTR ERV1 -51 812 7 1839 185 45 118 chr2 161078080 161078166 -89609688 - L1MD3 LINE L1 -53 7942 7851 2477 67 0 0 chr2 161078166 161078464 -89609390 - AluY SINE Alu -13 298 1 1839 185 45 118 chr2 161078464 161078972 -89608882 - L1MD3 LINE L1 -144 7851 7308 1609 177 0 15 chr2 161078972 161079243 -89608611 - AluJo SINE Alu -43 269 3 1839 185 45 118 chr2 161079243 161079280 -89608574 - L1MD3 LINE L1 -687 7308 7270 298 200 0 0 chr2 161079280 161079335 -89608519 - MLT1F1 LTR MaLR -445 122 68 1839 185 45 118 chr2 161079335 161079776 -89608078 - L1MD3 LINE L1 -725 7270 6707 21 0 0 0 chr2 161079931 161079952 -89607902 + AT_rich Low_complexity Low_complexity 1 21 0 721 100 10 0 chr2 161080580 161080680 -89607174 + FRAM SINE Alu 21 121 -55 1966 194 40 9 chr2 161080831 161081254 -89606600 + L1ME1 LINE L1 5574 6009 -157 920 242 65 11 chr2 161081257 161081694 -89606160 + MLT1D LTR MaLR 5 501 -4 590 174 24 84 chr2 161081698 161081825 -89606029 + L1ME1 LINE L1 6005 6121 -45 649 153 0 139 chr2 161081825 161081969 -89605885 + FLAM_A SINE Alu 1 124 -9 590 174 24 84 chr2 161081969 161082008 -89605846 + L1ME1 LINE L1 6121 6161 -5 298 219 109 0 chr2 161082467 161082531 -89605323 + MLT1L LTR MaLR 469 539 -76 647 261 80 73 chr2 161082608 161082748 -89605106 + LTR33 LTR ERVL 1 138 -383 1622 154 63 0 chr2 161082748 161083033 -89604821 + AluJo SINE Alu 1 303 -9 647 261 80 73 chr2 161083033 161083277 -89604577 + LTR33 LTR ERVL 138 464 -57 2275 74 37 10 chr2 161083277 161083575 -89604279 - AluSq SINE Alu -7 306 1 647 261 80 73 chr2 161083575 161083629 -89604225 + LTR33 LTR ERVL 464 516 -5 341 278 30 53 chr2 161083673 161083806 -89604048 - L1MDa LINE L1 -5153 1387 1258 274 241 35 60 chr2 161084869 161084985 -89602869 + L3 LINE CR1 664 776 -801 381 283 92 13 chr2 161085276 161085428 -89602426 + MER117 DNA MER1_type 32 195 -2 332 213 0 0 chr2 161085716 161085791 -89602063 + L1MD2 LINE L1 5709 5783 -2002 269 140 0 20 chr2 161085827 161085877 -89601977 + L1P5 LINE L1 5776 5824 -332 683 241 108 64 chr2 161085892 161085929 -89601925 + L1MD2 LINE L1 5806 5840 -519 2539 59 0 0 chr2 161085929 161086233 -89601621 - AluY SINE Alu -7 304 1 683 241 108 64 chr2 161086233 161086490 -89601364 + L1MD2 LINE L1 5840 6113 -246 518 183 43 17 chr2 161086580 161086695 -89601159 - FLAM_A SINE Alu -14 128 11 387 0 0 0 chr2 161088228 161088271 -89599583 + (TA)n Simple_repeat Simple_repeat 1 43 0 1064 155 68 0 chr2 161088309 161088516 -89599338 - L1MB4 LINE L1 -20 6160 5940 306 0 0 0 chr2 161088542 161088576 -89599278 + (TG)n Simple_repeat Simple_repeat 1 34 0 525 206 10 0 chr2 161088587 161088689 -89599165 - FLAM_A SINE Alu -39 103 1 1656 166 13 20 chr2 161088891 161089031 -89598823 + AluJo SINE Alu 1 140 -172 2124 107 10 0 chr2 161089031 161089321 -89598533 + AluSg SINE Alu 1 293 -17 1656 166 13 20 chr2 161089321 161089481 -89598373 + AluJo SINE Alu 140 299 -13 25 0 0 0 chr2 161089962 161089987 -89597867 + AT_rich Low_complexity Low_complexity 1 25 0 467 200 0 0 chr2 161090019 161090099 -89597755 - AluJ/FLAM SINE Alu -227 85 6 617 301 57 38 chr2 161090116 161090488 -89597366 - L1MC4a LINE L1 -1243 6565 6187 2148 125 0 3 chr2 161090489 161090792 -89597062 - AluSq SINE Alu -11 302 1 1681 196 33 3 chr2 161090796 161091162 -89596692 - AluJb SINE Alu 0 376 2 28 0 0 0 chr2 161091172 161091200 -89596654 + AT_rich Low_complexity Low_complexity 1 28 0 2268 259 49 46 chr2 161091217 161092453 -89595401 - L1MC4a LINE L1 -743 5403 4900 2704 250 69 49 chr2 161094155 161094953 -89592901 + L1ME LINE L1 1430 2211 -4004 2148 128 0 0 chr2 161094953 161095257 -89592597 + AluSx SINE Alu 1 304 -8 2704 250 69 49 chr2 161095257 161096136 -89591718 + L1ME LINE L1 2211 3091 -3124 2089 123 3 7 chr2 161096136 161096436 -89591418 - AluSx SINE Alu 0 312 14 2704 250 69 49 chr2 161096436 161096697 -89591157 + L1ME LINE L1 3091 3345 -2870 2393 258 76 42 chr2 161096672 161097579 -89590275 + L1ME LINE L1 3981 4856 -1377 * 1963 148 3 0 chr2 161097579 161097909 -89589945 - AluSx SINE Alu 0 331 1 2393 258 76 42 chr2 161097909 161098118 -89589736 + L1ME LINE L1 4856 5056 -1177 1711 68 5 0 chr2 161098118 161098339 -89589515 - L1PA8 LINE L1 -4 6168 5947 1836 137 7 3 chr2 161098340 161098624 -89589230 - AluSx SINE Alu -3 309 25 2393 258 76 42 chr2 161098624 161098663 -89589191 + L1ME LINE L1 5056 5092 -1141 2066 133 3 16 chr2 161098663 161098979 -89588875 + AluJb SINE Alu 1 312 0 2393 258 76 42 chr2 161098979 161099434 -89588420 + L1ME LINE L1 5092 5654 -579 * 7191 19 0 0 chr2 161099432 161100273 -89587581 - L1HS LINE L1 -1067 5079 4239 * 7936 11 0 0 chr2 161100270 161101347 -89586507 + L1HS LINE L1 5079 6155 0 204 40 0 0 chr2 161101347 161101372 -89586482 + (A)n Simple_repeat Simple_repeat 1 25 0 2237 96 3 16 chr2 161101406 161101709 -89586145 + AluSg SINE Alu 1 299 -11 2359 97 6 3 chr2 161101720 161102031 -89585823 + AluSx SINE Alu 1 312 0 4060 174 40 41 chr2 161102031 161102391 -89585463 + L1MB5 LINE L1 5112 5471 -703 2069 116 6 31 chr2 161102391 161102711 -89585143 + AluSx SINE Alu 1 312 0 4060 174 40 41 chr2 161102711 161103312 -89584542 + L1MB5 LINE L1 5471 6073 -101 784 167 0 23 chr2 161103312 161103444 -89584410 + FLAM_C SINE Alu 1 129 -4 4060 174 40 41 chr2 161103444 161103529 -89584325 + L1MB5 LINE L1 6073 6157 -17 2285 248 31 35 chr2 161103562 161104296 -89583558 + L1ME1 LINE L1 5430 6160 -6 22 0 0 0 chr2 161104299 161104321 -89583533 + AT_rich Low_complexity Low_complexity 1 22 0 1899 135 44 0 chr2 161104327 161104601 -89583253 + AluSx SINE Alu 3 288 -24 2834 202 24 15 chr2 161104609 161105287 -89582567 + L1MB4 LINE L1 5497 6180 0 307 309 21 19 chr2 161105361 161105553 -89582301 + L1MC2 LINE L1 110 537 -6318 6182 224 53 24 chr2 161106073 161106269 -89581585 + L1MC2 LINE L1 4365 4554 -2456 1550 204 0 14 chr2 161106269 161106404 -89581450 + AluJo SINE Alu 1 136 -176 1881 155 3 19 chr2 161106404 161106721 -89581133 + AluSx SINE Alu 1 312 0 1550 204 0 14 chr2 161106721 161106879 -89580975 + AluJo SINE Alu 136 290 -22 6182 224 53 24 chr2 161106879 161108505 -89579349 + L1MC2 LINE L1 4554 6238 -772 2636 171 48 9 chr2 161108505 161109049 -89578805 + L1MC2 LINE L1 6589 7153 -2 6182 224 53 24 chr2 161109049 161109079 -89578775 + L1MC2 LINE L1 6238 6266 -744 963 269 158 13 chr2 161109057 161109971 -89577883 + L1M4 LINE L1 1212 2264 -4695 * 670 120 0 0 chr2 161109971 161110063 -89577791 - AluSq/x SINE Alu -179 134 43 1382 128 87 5 chr2 161110312 161110530 -89577324 - AluJb SINE Alu -76 236 1 320 384 35 6 chr2 161111471 161111643 -89576211 + MIR3 SINE MIR 19 195 -13 2224 115 3 10 chr2 161111984 161112296 -89575558 + AluSx SINE Alu 2 311 -1 1548 194 3 30 chr2 161112305 161112604 -89575250 + AluJb SINE Alu 1 291 -21 3386 194 68 17 chr2 161112614 161112713 -89575141 + L1MB8 LINE L1 5391 5484 -694 2242 107 3 3 chr2 161112713 161113011 -89574843 + AluSq SINE Alu 1 298 -15 3386 194 68 17 chr2 161113011 161113659 -89574195 + L1MB8 LINE L1 5484 6176 -2 3108 273 65 33 chr2 161114225 161115633 -89572221 + L1ME1 LINE L1 38 1490 -4906 2698 98 14 16 chr2 161115633 161116001 -89571853 + MER1A DNA MER1_type 1 367 -162 2781 229 22 39 chr2 161116004 161116787 -89571067 + L1ME1 LINE L1 5323 5994 -241 2018 147 0 0 chr2 161116787 161117105 -89570749 + AluSx SINE Alu 1 318 0 2781 229 22 39 chr2 161117105 161117203 -89570651 + L1ME1 LINE L1 5994 6092 -143 445 257 7 22 chr2 161117115 161117251 -89570603 + L1MA10 LINE L1 6244 6377 -26 * 1777 181 43 16 chr2 161117251 161117621 -89570233 + Tigger6a DNA MER2_type 1 380 -703 1306 257 119 15 chr2 161117621 161118092 -89569762 + MLT2B1 LTR ERVL 1 520 0 1340 179 168 19 chr2 161118092 161118456 -89569398 + MLT1-int LTR MaLR 1 418 -953 2165 132 3 51 chr2 161118457 161118509 -89569345 + MER1B DNA MER1_type 1 54 -2658 7925 85 4 13 chr2 161118509 161119590 -89568264 + MER11C LTR ERVK 1 1071 0 2165 132 3 51 chr2 161119590 161119892 -89567962 + MER1B DNA MER1_type 54 338 -1 1869 150 14 0 chr2 161119946 161120232 -89567622 - AluJb SINE Alu -22 290 1 1078 237 43 23 chr2 161120234 161120580 -89567274 + MLT1-int LTR MaLR 441 884 -487 308 276 11 0 chr2 161120641 161120728 -89567126 + MLT-int LTR MaLR 679 766 -969 2034 185 16 63 chr2 161120820 161121121 -89566733 + MLT1A2-int LTR MaLR 1314 1628 -107 541 237 93 0 chr2 161121121 161121260 -89566594 - FRAM SINE Alu -13 153 2 2034 185 16 63 chr2 161121260 161121326 -89566528 + MLT1A2-int LTR MaLR 1628 1659 -76 2225 110 0 3 chr2 161121326 161121627 -89566227 - AluSq SINE Alu -8 305 6 2034 185 16 63 chr2 161121627 161121701 -89566153 + MLT1A2-int LTR MaLR 1659 1735 0 1143 285 39 17 chr2 161121704 161122065 -89565789 + MLT1A2 LTR MaLR 6 374 0 2661 202 37 3 chr2 161122068 161122686 -89565168 + Tigger6a DNA MER2_type 379 1017 -66 2130 141 0 3 chr2 161122686 161122998 -89564856 + AluSx SINE Alu 1 311 -1 2474 126 26 4 chr2 161123422 161124088 -89563766 + L1P4 LINE L1 4910 5587 -581 19704 157 50 36 chr2 161124092 161127363 -89560491 - L1 LINE L1 -2750 4815 1460 1792 158 27 13 chr2 161127363 161127661 -89560193 + AluJb SINE Alu 1 302 -10 19704 157 50 36 chr2 161127661 161129127 -89558727 - L1 LINE L1 -6105 1460 15 1196 204 0 0 chr2 161129142 161129362 -89558492 - AluJb SINE Alu -4 308 89 216 149 0 0 chr2 161129822 161129869 -89557985 + (TTTTTG)n Simple_repeat Simple_repeat 3 49 0 2184 133 3 0 chr2 161131185 161131493 -89556361 + AluSx SINE Alu 1 309 -3 2992 195 105 29 chr2 161132072 161132903 -89554951 + MER63C DNA MER1_type 31 924 -6 201 175 0 0 chr2 161133309 161133349 -89554505 + (TA)n Simple_repeat Simple_repeat 2 41 0 1430 204 36 94 chr2 161133405 161133949 -89553905 - L1MC5 LINE L1 -896 7065 6542 1718 182 7 7 chr2 161133995 161134313 -89553541 - AluJb SINE Alu 0 312 1 2684 23 0 3 chr2 161134391 161134696 -89553158 + AluY SINE Alu 1 304 -7 900 210 0 12 chr2 161134881 161135048 -89552806 - FRAM SINE Alu -1 165 1 362 237 0 34 chr2 161135254 161135372 -89552482 - L1MC5 LINE L1 -1882 5926 5813 31407 105 9 28 chr2 161135390 161141266 -89546588 - L1PA7 LINE L1 -2 6152 387 1095 238 50 85 chr2 161141304 161141788 -89546066 - L1MC5 LINE L1 -1979 5829 5363 751 236 81 0 chr2 161141840 161142001 -89545853 - FAM SINE Alu -1 174 1 411 230 22 28 chr2 161142033 161142211 -89545643 + CT-rich Low_complexity Low_complexity 3 179 0 1420 157 157 0 chr2 161142233 161142494 -89545360 - AluJb SINE Alu -10 302 1 282 291 90 61 chr2 161142494 161142933 -89544921 - L1MC5 LINE L1 -775 5371 4909 1681 159 42 36 chr2 161142933 161143105 -89544749 - AluJo SINE Alu -2 310 134 2254 81 7 7 chr2 161143105 161143400 -89544454 - AluSp SINE Alu -17 296 2 1681 159 42 36 chr2 161143400 161143535 -89544319 - AluJo SINE Alu -178 134 1 282 291 90 61 chr2 161143535 161143685 -89544169 - L1MC5 LINE L1 -1237 4909 4765 498 317 153 51 chr2 161144095 161144891 -89542963 + L2 LINE L2 2395 3271 -1 51 17 0 0 chr2 161145632 161145690 -89542164 + AT_rich Low_complexity Low_complexity 1 58 0 23 0 0 0 chr2 161145829 161145852 -89542002 + AT_rich Low_complexity Low_complexity 1 23 0 28 48 0 0 chr2 161146145 161146187 -89541667 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr2 161146605 161146627 -89541227 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 161148148 161148170 -89539684 + AT_rich Low_complexity Low_complexity 1 22 0 25 75 0 0 chr2 161153118 161153171 -89534683 + AT_rich Low_complexity Low_complexity 1 53 0 24 32 0 0 chr2 161154471 161154502 -89533352 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 161155502 161155524 -89532330 + AT_rich Low_complexity Low_complexity 1 22 0 1904 165 3 3 chr2 161156823 161157132 -89530722 - AluJb SINE Alu -3 309 1 688 91 0 3 chr2 161158070 161158308 -89529546 + AluSx SINE Alu 1 303 -9 24 0 0 0 chr2 161159472 161159496 -89528358 + AT_rich Low_complexity Low_complexity 1 24 0 723 144 34 0 chr2 161159496 161159614 -89528240 - FLAM_A SINE Alu -11 122 1 1587 170 28 28 chr2 161159889 161160171 -89527683 + AluJo SINE Alu 1 282 -30 225 167 0 0 chr2 161160206 161160242 -89527612 + Alu SINE Alu 247 282 -20 228 67 0 0 chr2 161160262 161160292 -89527562 + (CA)n Simple_repeat Simple_repeat 1 30 0 21 36 0 0 chr2 161160638 161160666 -89527188 + AT_rich Low_complexity Low_complexity 1 28 0 347 70 88 0 chr2 161160761 161160818 -89527036 + L1MA5 LINE L1 6236 6297 -3 696 204 0 8 chr2 161160818 161160950 -89526904 + FLAM_A SINE Alu 1 131 -2 24 32 0 0 chr2 161161166 161161197 -89526657 + AT_rich Low_complexity Low_complexity 1 31 0 353 254 78 21 chr2 161161371 161161513 -89526341 - L2 LINE L2 -1326 1988 1839 297 198 329 29 chr2 161161984 161162062 -89525792 - L1ME4a LINE L1 -251 5870 5817 1965 159 0 0 chr2 161162062 161162370 -89525484 - AluSx SINE Alu -4 308 1 297 198 329 29 chr2 161162370 161162498 -89525356 - L1ME4a LINE L1 -304 5817 5602 1315 201 100 15 chr2 161162499 161162898 -89524956 + MER63B DNA MER1_type 4 436 0 236 250 54 11 chr2 161163194 161163286 -89524568 - L1 LINE L1 -1856 4290 4195 2255 98 7 0 chr2 161163489 161163784 -89524070 - AluSq SINE Alu -16 297 1 695 148 0 0 chr2 161163784 161163892 -89523962 - AluJb SINE Alu -13 299 192 732 208 79 129 chr2 161165114 161165260 -89522594 - MER31-int LTR ERV1 -835 4101 3949 2519 71 0 0 chr2 161165260 161165570 -89522284 - AluY SINE Alu -1 310 1 2332 103 3 0 chr2 161165576 161165887 -89521967 - AluSp SINE Alu 0 313 2 732 208 79 129 chr2 161165887 161166089 -89521765 - MER31-int LTR ERV1 -992 3944 3764 1084 125 81 0 chr2 161166102 161166262 -89521592 - AluSx SINE Alu -137 175 3 219 36 0 0 chr2 161166277 161166305 -89521549 + (TATG)n Simple_repeat Simple_repeat 1 28 0 1665 103 60 68 chr2 161166350 161166654 -89521200 - AluSg SINE Alu 0 305 4 334 292 7 65 chr2 161166705 161166859 -89520995 - MER31-int LTR ERV1 -1873 3063 2919 2280 100 3 0 chr2 161166933 161167232 -89520622 + AluSg SINE Alu 1 300 -10 1030 128 9 3 chr2 161167469 161167687 -89520167 + AluSx SINE Alu 1 291 -21 2048 85 25 11 chr2 161167963 161168681 -89519173 + L1PB1 LINE L1 5284 6150 -1 579 241 9 46 chr2 161168868 161169084 -89518770 + Charlie1 DNA MER1_type 2550 2757 -4 2196 159 18 8 chr2 161169174 161169565 -89518289 - MER57A LTR ERV1 0 403 9 313 253 84 0 chr2 161169616 161169711 -89518143 - MER31-int LTR ERV1 -2869 2067 1965 2233 77 4 0 chr2 161169843 161170116 -89517738 + AluSp SINE Alu 21 294 -19 1678 194 0 3 chr2 161170292 161170591 -89517263 + AluJb SINE Alu 1 298 -14 2289 61 0 14 chr2 161170807 161171103 -89516751 - AluY SINE Alu -19 292 1 551 125 0 0 chr2 161171185 161171273 -89516581 + L1MB4 LINE L1 6051 6138 -42 374 185 46 0 chr2 161171275 161171340 -89516514 + 5S rRNA rRNA 23 90 -31 318 109 0 36 chr2 161171386 161171441 -89516413 - Tigger7 DNA MER2_type 0 2487 2435 1406 219 11 0 chr2 161171471 161171736 -89516118 - Tigger7 DNA MER2_type -465 268 1 1258 247 99 11 chr2 161172311 161172676 -89515178 - MLT1F1 LTR MaLR -8 559 163 817 120 17 0 chr2 161172777 161172917 -89514937 + FLAM_C SINE Alu 1 142 0 1132 209 4 0 chr2 161173076 161173306 -89514548 - AluJb SINE Alu 0 312 82 23 54 0 0 chr2 161173665 161173702 -89514152 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr2 161174291 161174322 -89513532 + AT_rich Low_complexity Low_complexity 1 31 0 2030 119 3 7 chr2 161174599 161174917 -89512937 - AluSq SINE Alu 0 317 1 2328 112 0 0 chr2 161175007 161175320 -89512534 - AluSq SINE Alu 0 313 1 559 183 73 26 chr2 161175409 161175600 -89512254 - Charlie7 DNA MER1_type -3 2609 2410 * 1003 263 170 22 chr2 161175588 161176181 -89511673 - Charlie7 DNA MER1_type -1893 719 39 384 251 64 41 chr2 161176482 161176653 -89511201 + MER20B DNA MER1_type 1 175 -608 775 239 6 18 chr2 161176709 161176876 -89510978 - AluJo SINE Alu -37 275 111 1591 145 3 80 chr2 161176992 161177317 -89510537 - AluJo SINE Alu -12 300 1 286 362 69 9 chr2 161177373 161177489 -89510365 - L2 LINE L2 -23 3249 3127 2425 64 0 7 chr2 161177846 161178143 -89509711 + AluY SINE Alu 2 296 -15 601 164 0 36 chr2 161178502 161178612 -89509242 - AluJo SINE Alu -180 132 27 23 33 0 0 chr2 161178997 161179027 -89508827 + AT_rich Low_complexity Low_complexity 1 30 0 1568 257 93 81 chr2 161179957 161180118 -89507736 + L2 LINE L2 2292 2450 -863 2466 149 42 2 chr2 161180118 161180527 -89507327 - MSTA LTR MaLR -2 426 2 1568 257 93 81 chr2 161180527 161180805 -89507049 + L2 LINE L2 2450 2723 -590 2152 120 0 0 chr2 161180805 161181097 -89506757 + AluSc SINE Alu 1 292 -17 1568 257 93 81 chr2 161181097 161181653 -89506201 + L2 LINE L2 2723 3313 0 2390 105 0 0 chr2 161181810 161182123 -89505731 + AluSq SINE Alu 1 313 0 1504 147 94 4 chr2 161182542 161182807 -89505047 + AluJb SINE Alu 3 291 -21 23 54 0 0 chr2 161183008 161183045 -89504809 + AT_rich Low_complexity Low_complexity 1 37 0 21555 54 5 3 chr2 161183151 161186725 -89501129 - L1PA5 LINE L1 -8 6146 2563 293 235 15 0 chr2 161186815 161186883 -89500971 + MER103 DNA DNA 98 166 0 245 263 163 38 chr2 161187746 161187906 -89499948 - L1ME4a LINE L1 -1 6120 5941 1768 178 0 7 chr2 161187988 161188281 -89499573 - AluJb SINE Alu -21 291 1 2424 84 0 3 chr2 161188285 161188593 -89499261 - AluSg SINE Alu -3 307 1 314 297 117 8 chr2 161188689 161188817 -89499037 - L1ME4a LINE L1 -2331 5477 5336 330 137 0 0 chr2 161188818 161188869 -89498985 - FLAM SINE Alu -2 131 81 583 251 85 38 chr2 161188896 161189106 -89498748 - MIR SINE MIR -9 253 32 183 209 139 0 chr2 161189587 161189630 -89498224 - MIR SINE MIR -116 146 98 271 143 0 0 chr2 161189908 161189957 -89497897 - Alu SINE Alu -6 294 246 3225 157 33 83 chr2 161190023 161190225 -89497629 - L1MB8 LINE L1 -164 6014 5804 2091 122 47 0 chr2 161190225 161190521 -89497333 - AluSg SINE Alu 0 310 1 3225 157 33 83 chr2 161190521 161191051 -89496803 - L1MB8 LINE L1 -374 5804 5249 459 35 0 0 chr2 161191051 161191108 -89496746 + (TG)n Simple_repeat Simple_repeat 2 58 0 3225 157 33 83 chr2 161191108 161191132 -89496722 - L1MB8 LINE L1 -929 5249 5225 1555 181 7 7 chr2 161191132 161191408 -89496446 - AluJb SINE Alu -36 276 1 3225 157 33 83 chr2 161191408 161192033 -89495821 - L1MB8 LINE L1 -953 5225 4670 1953 283 68 29 chr2 161192732 161193205 -89494649 - MER21B LTR ERV1 -111 752 240 1532 215 38 26 chr2 161193205 161193596 -89494258 + MSTD LTR MaLR 1 396 0 1953 283 68 29 chr2 161193596 161193846 -89494008 - MER21B LTR ERV1 -623 240 1 373 258 0 21 chr2 161193906 161194003 -89493851 - MER34 LTR ERV1 -447 95 1 2129 139 0 0 chr2 161194071 161194373 -89493481 + AluSx SINE Alu 1 302 -10 2400 84 7 0 chr2 161194744 161195052 -89492802 + AluSg SINE Alu 1 310 0 199 283 0 0 chr2 161195206 161195252 -89492602 - L2 LINE L2 -9 3304 3259 969 179 0 6 chr2 161195388 161195556 -89492298 - FRAM SINE Alu -18 158 1 22 0 0 0 chr2 161195796 161195818 -89492036 + AT_rich Low_complexity Low_complexity 1 22 0 750 137 13 59 chr2 161197052 161197205 -89490649 + L1MB5 LINE L1 5999 6144 -30 2270 110 0 0 chr2 161197225 161197533 -89490321 - AluSc SINE Alu -1 308 1 2057 111 49 0 chr2 161197975 161198263 -89489591 - AluSq SINE Alu -11 302 1 2324 82 3 0 chr2 161198915 161199208 -89488646 + AluSp SINE Alu 2 295 -18 2186 123 0 3 chr2 161199418 161199728 -89488126 - AluSg SINE Alu -1 309 1 1028 238 64 57 chr2 161199782 161200055 -89487799 + L2 LINE L2 1628 1907 -1407 2208 110 3 0 chr2 161200055 161200346 -89487508 + AluSx SINE Alu 1 292 -20 1028 238 64 57 chr2 161200346 161200496 -89487358 + L2 LINE L2 1907 2054 -1260 945 283 219 19 chr2 161200517 161201300 -89486554 + L2 LINE L2 2375 3312 -1 1821 120 68 19 chr2 161201386 161201711 -89486143 - L1MB3 LINE L1 -4 6179 5839 1017 200 5 24 chr2 161203567 161203703 -89484151 - MER3 DNA MER1_type -8 201 69 2280 163 47 29 chr2 161203703 161204152 -89483702 - MSTB2 LTR MaLR 0 457 1 1017 200 5 24 chr2 161204152 161204220 -89483634 - MER3 DNA MER1_type -140 69 1 1507 82 5 5 chr2 161204398 161204594 -89483260 + AluSg1 SINE Alu 1 196 -113 430 88 0 0 chr2 161204595 161204652 -89483202 + AluSg1 SINE Alu 241 297 -15 1812 151 13 20 chr2 161205969 161206268 -89481586 - AluJb SINE Alu -15 297 1 2355 73 0 10 chr2 161206665 161206954 -89480900 + AluSp SINE Alu 1 286 -27 837 78 0 0 chr2 161206852 161206954 -89480900 + AluSp/q SINE Alu 185 310 0 217 0 0 0 chr2 161206954 161206978 -89480876 + (TAAA)n Simple_repeat Simple_repeat 2 96 0 758 290 71 29 chr2 161207576 161207904 -89479950 - L2 LINE L2 -254 3059 2710 763 140 45 57 chr2 161207910 161208067 -89479787 + AluJb SINE Alu 37 191 -121 186 316 36 50 chr2 161208235 161208374 -89479480 + MIR SINE MIR 81 217 -45 1854 158 7 3 chr2 161208463 161208761 -89479093 + AluSx SINE Alu 1 299 -13 24 96 0 0 chr2 161209560 161209633 -89478221 + AT_rich Low_complexity Low_complexity 1 73 0 2339 80 10 0 chr2 161209834 161210134 -89477720 + AluSx SINE Alu 1 303 -9 180 0 0 0 chr2 161210135 161210155 -89477699 + (CA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr2 161210830 161210851 -89477003 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 161210965 161210988 -89476866 + AT_rich Low_complexity Low_complexity 1 23 0 23 78 0 0 chr2 161211468 161211519 -89476335 + AT_rich Low_complexity Low_complexity 1 51 0 200 347 52 89 chr2 161211577 161211803 -89476051 + L2 LINE L2 2622 2830 -484 2229 121 7 0 chr2 161211803 161212110 -89475744 - AluSx SINE Alu -1 311 3 200 347 52 89 chr2 161212110 161212252 -89475602 + L2 LINE L2 2830 2976 -338 361 250 103 59 chr2 161212575 161212711 -89475143 + MIR SINE MIR 1 142 -120 443 322 101 14 chr2 161213158 161213366 -89474488 + MIR SINE MIR 10 235 -27 2279 92 7 0 chr2 161213734 161214037 -89473817 - AluY SINE Alu -6 305 1 1686 169 3 14 chr2 161214088 161214378 -89473476 + AluJo SINE Alu 3 289 -23 1280 248 135 22 chr2 161214586 161215045 -89472809 + MLT1J LTR MaLR 1 511 0 2017 106 0 67 chr2 161215081 161215411 -89472443 + AluSg SINE Alu 1 308 -2 1365 150 18 4 chr2 161215499 161215726 -89472128 - MER30 DNA MER1_type 0 230 1 2100 105 0 3 chr2 161215920 161216227 -89471627 - AluSx SINE Alu 0 306 1 24 32 0 0 chr2 161216342 161216373 -89471481 + AT_rich Low_complexity Low_complexity 1 31 0 806 203 13 13 chr2 161216414 161216572 -89471282 - FRAM SINE Alu -8 158 1 25 31 0 0 chr2 161216576 161216608 -89471246 + AT_rich Low_complexity Low_complexity 1 32 0 273 291 154 0 chr2 161216678 161216788 -89471066 - MIR SINE MIR -69 193 67 1998 132 69 26 chr2 161218738 161219087 -89468767 - THE1B LTR MaLR 0 364 1 212 342 60 87 chr2 161219452 161219601 -89468253 + L2 LINE L2 3115 3259 -13 508 332 53 42 chr2 161220571 161220854 -89467000 + L2 LINE L2 2238 2523 -791 453 298 50 0 chr2 161220870 161221011 -89466843 - MIR SINE MIR 0 262 115 1040 215 80 40 chr2 161221046 161221391 -89466463 + L1MC5 LINE L1 7291 7654 -307 2213 113 0 0 chr2 161221391 161221692 -89466162 + AluSc SINE Alu 1 301 -8 1040 215 80 40 chr2 161221692 161221722 -89466132 + L1MC5 LINE L1 7654 7681 -280 23 0 0 0 chr2 161221905 161221928 -89465926 + AT_rich Low_complexity Low_complexity 1 23 0 708 269 52 16 chr2 161222075 161222324 -89465530 - MIR SINE MIR -2 260 3 524 223 0 87 chr2 161222374 161222558 -89465296 - L1M4c LINE L1 -4701 1683 1516 974 204 0 0 chr2 161222563 161222739 -89465115 - FRAM SINE Alu -5 171 1 2866 161 27 44 chr2 161222739 161223377 -89464477 - L1M4c LINE L1 -4860 1524 898 591 182 8 23 chr2 161223350 161223482 -89464372 + L1M4c LINE L1 1688 1817 -4567 * 2021 113 3 3 chr2 161223646 161223965 -89463889 + AluSx SINE Alu 1 319 0 350 337 0 10 chr2 161224038 161224139 -89463715 - MIR SINE MIR -137 125 26 221 342 34 43 chr2 161224490 161224607 -89463247 - MIR SINE MIR -139 123 8 682 287 63 44 chr2 161225018 161225335 -89462519 - L2 LINE L2 0 3313 2991 650 180 0 33 chr2 161225513 161225635 -89462219 - FLAM_C SINE Alu -25 118 1 1384 159 0 4 chr2 161226998 161227231 -89460623 + AluSg/x SINE Alu 72 303 -9 836 273 48 32 chr2 161227342 161227653 -89460201 + HAL1 LINE L1 12 327 -2180 229 266 71 71 chr2 161227738 161227851 -89460003 + HAL1 LINE L1 351 463 -2044 2085 180 0 13 chr2 161227856 161228251 -89459603 - L1MB3 LINE L1 -80 6103 5714 22 56 0 0 chr2 161228780 161228816 -89459038 + AT_rich Low_complexity Low_complexity 1 36 0 602 129 0 10 chr2 161228878 161228979 -89458875 + HY3 scRNA scRNA 1 100 -1 2129 123 0 10 chr2 161229684 161229985 -89457869 - AluSx SINE Alu -14 298 1 1837 124 78 0 chr2 161230318 161230601 -89457253 + AluSx SINE Alu 1 305 -7 1902 133 8 100 chr2 161230647 161231016 -89456838 + MER7A DNA MER2_type 14 346 0 229 318 169 40 chr2 161231735 161231883 -89455971 - MIR3 SINE MIR -23 185 19 271 342 68 19 chr2 161232480 161232641 -89455213 - MIR3 SINE MIR -10 198 30 29 0 0 0 chr2 161233110 161233139 -89454715 + AT_rich Low_complexity Low_complexity 1 29 0 433 315 47 0 chr2 161233910 161234037 -89453817 - MIR3 SINE MIR -6 202 70 2033 112 18 0 chr2 161234228 161234536 -89453318 - AluSx SINE Alu 0 313 1 21 0 0 0 chr2 161234735 161234756 -89453098 + AT_rich Low_complexity Low_complexity 1 21 0 1089 303 67 27 chr2 161235421 161235870 -89451984 - L2 LINE L2 -21 3292 2826 22 35 0 0 chr2 161236072 161236101 -89451753 + AT_rich Low_complexity Low_complexity 1 29 0 1638 29 0 10 chr2 161236101 161236305 -89451549 - L1PA5 LINE L1 -2 6152 5951 2284 103 3 0 chr2 161236524 161236824 -89451030 - AluSx SINE Alu -11 301 1 383 366 47 17 chr2 161236943 161237175 -89450679 + L2 LINE L2 2594 2832 -482 1445 178 55 113 chr2 161237624 161238076 -89449778 + L1ME LINE L1 4996 5460 -706 403 141 70 0 chr2 161238076 161238147 -89449707 + AluJo SINE Alu 61 136 -166 1445 178 55 113 chr2 161238147 161238298 -89449556 + L1ME LINE L1 5460 5618 -548 411 145 40 0 chr2 161238301 161238377 -89449477 + AluJ/FRAM SINE Alu 224 302 -10 295 320 103 18 chr2 161238669 161238997 -89448857 - L1ME LINE L1 -317 5849 5493 1217 120 24 19 chr2 161239535 161239743 -89448111 - Tigger4(Zombi) DNA MER2_type 0 2731 2523 668 175 0 0 chr2 161239739 161239842 -89448012 - Tigger4(Zombi) DNA MER2_type -2607 124 22 * 214 321 34 101 chr2 161239927 161240136 -89447718 + L2 LINE L2 2885 3079 -193 658 149 0 0 chr2 161240190 161240297 -89447557 - FLAM_A SINE Alu -12 130 24 191 309 0 36 chr2 161240339 161240394 -89447460 + L2 LINE L2 3190 3242 -30 22 0 0 0 chr2 161240401 161240423 -89447431 + AT_rich Low_complexity Low_complexity 1 22 0 1391 139 9 112 chr2 161240750 161241073 -89446781 - AluJb SINE Alu -9 303 14 2166 104 20 0 chr2 161241503 161241801 -89446053 - AluSg SINE Alu -6 304 1 1689 193 7 3 chr2 161241804 161242104 -89445750 - AluJo SINE Alu -11 301 1 764 174 0 8 chr2 161242109 161242241 -89445613 - FLAM_C SINE Alu -2 131 1 248 254 119 0 chr2 161242242 161242309 -89445545 - MER5A DNA MER1_type -114 75 1 1135 68 0 0 chr2 161245413 161245561 -89442293 + AluY SINE Alu 161 308 -3 2882 3 0 3 chr2 161245695 161246014 -89441840 + AluYb8 SINE Alu 1 318 0 214 360 20 10 chr2 161249476 161249576 -89438278 + MIR SINE MIR 35 135 -73 612 242 75 91 chr2 161250400 161250652 -89437202 - MIR SINE MIR -12 250 3 406 268 58 14 chr2 161250702 161250840 -89437014 - L2 LINE L2 -1 3312 3169 1175 266 189 25 chr2 161250965 161251787 -89436067 - L2 LINE L2 -50 3263 2293 336 314 117 21 chr2 161252049 161252237 -89435617 - MIR SINE MIR -37 225 20 2169 121 0 7 chr2 161253719 161254026 -89433828 + AluSq SINE Alu 1 305 -8 536 100 0 0 chr2 161254491 161254571 -89433283 - L1MB8 LINE L1 -6 6172 6093 1700 172 39 57 chr2 161254576 161254756 -89433098 - L1MB4 LINE L1 0 6180 5998 1601 133 72 34 chr2 161254756 161255049 -89432805 + AluJb SINE Alu 1 304 -8 1700 172 39 57 chr2 161255049 161255275 -89432579 - L1MB4 LINE L1 -182 5998 5781 180 179 0 0 chr2 161255285 161255324 -89432530 + (CATA)n Simple_repeat Simple_repeat 3 41 0 227 242 22 44 chr2 161255332 161255423 -89432431 - L1MC4 LINE L1 -1339 6703 6615 215 215 15 0 chr2 161255426 161255491 -89432363 + (TA)n Simple_repeat Simple_repeat 2 67 0 276 164 27 9 chr2 161255520 161255628 -89432226 - L1MB4 LINE L1 -480 5700 5555 22 70 0 0 chr2 161256048 161256091 -89431763 + AT_rich Low_complexity Low_complexity 1 43 0 1828 141 4 4 chr2 161257054 161257330 -89430524 + AluSx SINE Alu 1 276 -36 505 227 81 52 chr2 161259751 161259923 -89427931 - MER5B DNA MER1_type 0 178 2 869 205 6 6 chr2 161260723 161260889 -89426965 + FAM SINE Alu 2 167 -8 1191 8 0 0 chr2 161260926 161261059 -89426795 + L1PA3 LINE L1 6019 6151 -4 21 71 0 0 chr2 161261059 161261101 -89426753 + AT_rich Low_complexity Low_complexity 1 42 0 2385 92 0 3 chr2 161261344 161261658 -89426196 + AluSq SINE Alu 1 313 0 485 319 75 60 chr2 161261733 161262252 -89425602 - L2 LINE L2 -191 3081 2553 1617 185 7 30 chr2 161262580 161262877 -89424977 - AluJb SINE Alu -17 295 6 2849 141 52 48 chr2 161262886 161263484 -89424370 - L1MB8 LINE L1 0 6178 5579 1616 171 21 4 chr2 161263828 161263982 -89423872 - AluJb SINE Alu -27 285 122 692 46 54 0 chr2 161263982 161264112 -89423742 + (TA)n Simple_repeat Simple_repeat 1 137 0 1616 171 21 4 chr2 161264112 161264237 -89423617 - AluJb SINE Alu -190 122 1 2179 136 0 0 chr2 161264243 161264553 -89423301 - AluSx SINE Alu -2 310 1 6354 91 17 1 chr2 161264712 161266211 -89421643 + L1PA11 LINE L1 4678 6172 -2 2402 68 10 3 chr2 161268412 161268722 -89419132 - AluSp SINE Alu -1 312 1 432 122 222 0 chr2 161268722 161268812 -89419042 - AluY SINE Alu -11 300 191 2233 101 0 13 chr2 161268823 161269131 -89418723 - AluSc SINE Alu -5 304 1 2047 92 14 14 chr2 161269156 161269450 -89418404 + AluY SINE Alu 1 294 -17 23 92 0 0 chr2 161269590 161269655 -89418199 + AT_rich Low_complexity Low_complexity 1 65 0 2857 6 0 0 chr2 161269710 161270021 -89417833 - AluYa5 SINE Alu 0 311 1 262 234 0 26 chr2 161270728 161270805 -89417049 + (TATATG)n Simple_repeat Simple_repeat 2 76 0 589 158 105 0 chr2 161271910 161272024 -89415830 + MER3 DNA MER1_type 83 208 -1 254 369 45 9 chr2 161272629 161272740 -89415114 - L2 LINE L2 -1 3271 3157 2799 7 0 3 chr2 161273478 161273786 -89414068 - AluYa5 SINE Alu -4 307 1 1079 174 0 55 chr2 161274478 161274714 -89413140 + AluJb SINE Alu 84 306 -6 1425 179 13 45 chr2 161275294 161275602 -89412252 - AluJo SINE Alu -13 299 2 1363 188 49 49 chr2 161275608 161276033 -89411821 - L1MDa LINE L1 -4856 1684 1260 214 317 89 41 chr2 161276357 161276480 -89411374 - L3 LINE CR1 -78 1499 1371 332 182 56 91 chr2 161276551 161276694 -89411160 - L1ME4a LINE L1 -20 6101 5964 951 105 46 0 chr2 161276700 161276852 -89411002 - L1MA3 LINE L1 0 6305 6147 2018 142 3 7 chr2 161276856 161277159 -89410695 + AluSx SINE Alu 5 306 -6 1861 111 44 0 chr2 161277211 161277526 -89410328 - L1PBa LINE L1 -4549 2314 1986 356 230 145 56 chr2 161278242 161278546 -89409308 - L1MC4a LINE L1 -1841 5967 5637 201 147 0 0 chr2 161278613 161278647 -89409207 + (A)n Simple_repeat Simple_repeat 1 34 0 245 354 31 21 chr2 161279555 161279651 -89408203 - MIR3 SINE MIR -27 181 85 686 216 88 33 chr2 161281018 161281199 -89406655 - MER20 DNA MER1_type 0 219 29 2092 136 0 13 chr2 161281385 161281730 -89406124 - AluSx SINE Alu 0 312 1 1628 165 0 11 chr2 161281752 161282019 -89405835 + AluJb SINE Alu 28 291 -21 370 281 168 12 chr2 161282779 161282946 -89404908 - MIR SINE MIR -27 235 43 2206 192 97 67 chr2 161283103 161283760 -89404094 - L1MC4a LINE L1 0 7808 7132 30 27 0 0 chr2 161283761 161283798 -89404056 + AT_rich Low_complexity Low_complexity 1 37 0 507 71 0 0 chr2 161283798 161283868 -89403986 - L1PA5 LINE L1 -7 6147 6078 23 0 0 0 chr2 161286400 161286423 -89401431 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 161286874 161286909 -89400945 + AT_rich Low_complexity Low_complexity 1 35 0 1835 106 78 0 chr2 161287122 161287378 -89400476 + AluSp SINE Alu 1 276 -37 229 224 0 0 chr2 161287834 161287892 -89399962 + L1MC4 LINE L1 6646 6703 -1339 2288 95 0 7 chr2 161287897 161288201 -89399653 - AluY SINE Alu -9 302 1 23743 104 18 37 chr2 161288986 161293148 -89394706 + L1P3 LINE L1 777 4852 -1609 1103 263 217 70 chr2 161293482 161293639 -89394215 + L2 LINE L2 1587 1720 -1594 1524 158 75 15 chr2 161293639 161293905 -89393949 - AluJb SINE Alu -30 282 1 1103 263 217 70 chr2 161293905 161294713 -89393141 + L2 LINE L2 1720 2694 -620 749 259 63 0 chr2 161294743 161294932 -89392922 - L1ME1 LINE L1 -1 6165 5965 * 2004 224 102 82 chr2 161294929 161295484 -89392370 - L1M4 LINE L1 -2155 3991 3449 2118 100 0 17 chr2 161295484 161295801 -89392053 + AluSx SINE Alu 1 312 0 2004 224 102 82 chr2 161295801 161296157 -89391697 - L1M4 LINE L1 -2697 3449 3047 1988 125 3 26 chr2 161296157 161296462 -89391392 - AluSg SINE Alu -12 298 1 2004 224 102 82 chr2 161296462 161296734 -89391120 - L1M4 LINE L1 -3099 3047 2782 228 35 0 0 chr2 161296884 161296913 -89390941 + (TTG)n Simple_repeat Simple_repeat 2 30 0 292 295 91 56 chr2 161297114 161297541 -89390313 - L1ME LINE L1 -5618 452 11 364 278 35 75 chr2 161297596 161297769 -89390085 + MLT1K LTR MaLR 138 303 -285 322 335 194 34 chr2 161298009 161298222 -89389632 + L2 LINE L2 2804 2982 -331 1270 163 309 22 chr2 161298222 161298626 -89389228 + MLT2B1 LTR ERVL 1 520 0 322 335 194 34 chr2 161298626 161298851 -89389003 + L2 LINE L2 2982 3312 -1 2061 123 28 0 chr2 161299297 161299582 -89388272 - AluSx SINE Alu -16 296 4 1606 180 5 88 chr2 161299789 161300211 -89387643 + MLT1B LTR MaLR 4 390 0 2144 223 62 19 chr2 161300617 161301213 -89386641 + L1MD3 LINE L1 7374 7995 0 2137 118 0 3 chr2 161301221 161301508 -89386346 + AluSg SINE Alu 1 286 -24 2521 126 17 10 chr2 161301526 161301940 -89385914 + L1M2 LINE L1 5333 5749 -542 209 377 37 33 chr2 161306353 161306597 -89381257 - L2 LINE L2 -1084 2230 1986 2545 71 0 0 chr2 161306600 161306911 -89380943 + AluY SINE Alu 1 311 0 2011 123 11 7 chr2 161306919 161307203 -89380651 + AluSg SINE Alu 3 287 -23 243 312 26 0 chr2 161307805 161307882 -89379972 - L2 LINE L2 0 3272 3194 249 324 83 28 chr2 161307989 161308097 -89379757 + L2 LINE L2 3158 3271 -1 225 0 0 0 chr2 161309436 161309461 -89378393 + (A)n Simple_repeat Simple_repeat 1 25 0 2091 173 3 0 chr2 161310572 161310918 -89376936 + MER7A DNA MER2_type 2 346 0 24 53 0 0 chr2 161311078 161311116 -89376738 + AT_rich Low_complexity Low_complexity 1 38 0 2194 129 0 0 chr2 161312098 161312407 -89375447 - AluSx SINE Alu -3 309 1 942 239 29 25 chr2 161312673 161312912 -89374942 + MIR SINE MIR 23 262 0 1652 164 64 0 chr2 161314203 161314483 -89373371 + AluSx SINE Alu 1 298 -14 962 155 12 19 chr2 161314831 161314992 -89372862 - AluSg/x SINE Alu -11 298 139 689 209 14 7 chr2 161315195 161315334 -89372520 - AluJo SINE Alu -170 142 3 23 0 0 0 chr2 161315751 161315774 -89372080 + AT_rich Low_complexity Low_complexity 1 23 0 1354 159 37 83 chr2 161317068 161317394 -89370460 - AluJo SINE Alu -1 311 1 1748 190 43 0 chr2 161317861 161318230 -89369624 - L1MB5 LINE L1 -7 6167 5783 291 295 98 55 chr2 161318611 161318794 -89369060 - MIR SINE MIR 0 262 72 407 179 116 27 chr2 161318836 161318948 -89368906 - L1MC5 LINE L1 -44 7917 7796 288 233 341 16 chr2 161318949 161319078 -89368776 + LTR41 LTR ERVL 3 173 -600 1660 197 10 0 chr2 161319083 161319392 -89368462 - AluJb SINE Alu 0 312 1 694 226 3 142 chr2 161319696 161320006 -89367848 + LTR41 LTR ERVL 496 762 -11 284 236 79 0 chr2 161321127 161321216 -89366638 - L1MC5 LINE L1 -160 7801 7706 202 279 152 0 chr2 161321278 161321357 -89366497 - L2 LINE L2 -15 3298 3208 26 30 0 0 chr2 161321888 161321921 -89365933 + AT_rich Low_complexity Low_complexity 1 33 0 3125 149 35 51 chr2 161322079 161322729 -89365125 + L1MB3 LINE L1 5543 6182 -1 688 325 105 33 chr2 161322761 161323281 -89364573 + L2 LINE L2 2740 3301 -12 855 131 7 22 chr2 161323431 161323568 -89364286 + FRAM SINE Alu 20 154 -22 23 68 0 0 chr2 161323570 161323614 -89364240 + AT_rich Low_complexity Low_complexity 1 44 0 24 0 0 0 chr2 161324188 161324212 -89363642 + AT_rich Low_complexity Low_complexity 1 24 0 2126 96 24 0 chr2 161324416 161324707 -89363147 + AluSg1 SINE Alu 1 298 -11 302 291 121 24 chr2 161325404 161325569 -89362285 + L2 LINE L2 3047 3227 -86 183 42 0 0 chr2 161326119 161326143 -89361711 + (GAA)n Simple_repeat Simple_repeat 3 26 0 2033 148 0 0 chr2 161327286 161327590 -89360264 - AluSx SINE Alu -8 304 1 859 133 7 22 chr2 161327694 161327829 -89360025 + FLAM_C SINE Alu 1 133 0 393 240 96 16 chr2 161328088 161328213 -89359641 - MIR SINE MIR -12 250 116 2263 85 0 10 chr2 161328453 161328758 -89359096 - AluY SINE Alu -9 302 1 1773 112 26 22 chr2 161329435 161329571 -89358283 + AluSx SINE Alu 1 140 -172 2360 95 0 0 chr2 161329571 161329876 -89357978 + AluSc SINE Alu 1 305 -4 1773 112 26 22 chr2 161329876 161330006 -89357848 + AluSx SINE Alu 140 268 -44 36 23 0 0 chr2 161330009 161330052 -89357802 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr2 161330248 161330276 -89357578 + AT_rich Low_complexity Low_complexity 1 28 0 2302 78 0 0 chr2 161330766 161331073 -89356781 + AluSc SINE Alu 1 307 0 1716 171 17 16 chr2 161331075 161331420 -89356434 + MER47B DNA MER2_type 25 417 -1 21 0 0 0 chr2 161331659 161331680 -89356174 + AT_rich Low_complexity Low_complexity 1 21 0 192 172 0 0 chr2 161332390 161332448 -89355406 + (ATG)n Simple_repeat Simple_repeat 3 60 0 2496 136 58 5 chr2 161334668 161335080 -89352774 - Tigger2a DNA MER2_type 0 434 1 23 54 0 0 chr2 161335907 161335944 -89351910 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 161336592 161336621 -89351233 + AT_rich Low_complexity Low_complexity 1 29 0 195 343 0 57 chr2 161338105 161338210 -89349644 + MIR SINE MIR 108 206 -56 2119 109 3 3 chr2 161339744 161340046 -89347808 + AluSx SINE Alu 1 302 -10 1567 197 25 16 chr2 161340238 161340553 -89347301 - MER2 DNA MER2_type 0 345 28 21 0 0 0 chr2 161340725 161340746 -89347108 + AT_rich Low_complexity Low_complexity 1 21 0 5136 180 47 18 chr2 161341199 161341887 -89345967 - L1PA16 LINE L1 -3 6163 5496 2213 105 0 3 chr2 161341887 161342191 -89345663 - AluY SINE Alu -8 303 1 5136 180 47 18 chr2 161342191 161343485 -89344369 - L1PA16 LINE L1 -670 5496 4136 23 33 0 0 chr2 161343626 161343656 -89344198 + AT_rich Low_complexity Low_complexity 1 30 0 1732 191 0 16 chr2 161343750 161344064 -89343790 + AluJo SINE Alu 1 309 -3 266 262 12 24 chr2 161345165 161345249 -89342605 - MLT1J LTR MaLR -428 83 1 216 250 36 18 chr2 161345283 161345339 -89342515 + MIR SINE MIR 23 79 -129 185 276 53 66 chr2 161345994 161346070 -89341784 + MIR3 SINE MIR 120 194 -14 2207 118 0 0 chr2 161347756 161348061 -89339793 + AluSx SINE Alu 3 307 -5 469 278 161 31 chr2 161349177 161349400 -89338454 + MIR SINE MIR 10 261 -1 2304 98 0 0 chr2 161349763 161350060 -89337794 - AluSg SINE Alu -13 297 1 1423 204 127 95 chr2 161350112 161350340 -89337514 - L1MC5 LINE L1 -48 7913 7694 4601 110 18 36 chr2 161350340 161350395 -89337459 - L1MA3 LINE L1 0 6305 6251 2158 102 0 0 chr2 161350395 161350690 -89337164 - AluSx SINE Alu -17 295 1 4601 110 18 36 chr2 161350690 161351408 -89336446 - L1MA3 LINE L1 -54 6251 5546 1423 204 127 95 chr2 161351408 161351488 -89336366 - L1MC5 LINE L1 -267 7694 7618 2176 92 0 3 chr2 161351488 161351800 -89336054 - AluSq SINE Alu 0 311 1 1423 204 127 95 chr2 161351800 161352291 -89335563 - L1MC5 LINE L1 -343 7618 7086 1546 205 0 7 chr2 161353919 161354202 -89333652 + AluJo SINE Alu 19 299 -13 21 0 0 0 chr2 161354380 161354401 -89333453 + AT_rich Low_complexity Low_complexity 1 21 0 1894 145 56 11 chr2 161354555 161354914 -89332940 - THE1C LTR MaLR 0 375 1 415 172 166 51 chr2 161355873 161356030 -89331824 - MER104 DNA MER2_type -1 179 5 2207 109 3 3 chr2 161356275 161356588 -89331266 - AluSq SINE Alu 0 313 1 22 80 0 0 chr2 161356633 161356683 -89331171 + AT_rich Low_complexity Low_complexity 1 50 0 1356 194 51 31 chr2 161356752 161357045 -89330809 + AluJo SINE Alu 1 299 -13 1820 127 58 4 chr2 161357760 161358035 -89329819 - AluSq SINE Alu -23 290 1 284 331 76 25 chr2 161358051 161358171 -89329683 + MIR SINE MIR 90 221 -41 2479 68 3 0 chr2 161358171 161358481 -89329373 + AluY SINE Alu 1 311 0 284 331 76 25 chr2 161358481 161358517 -89329337 + MIR SINE MIR 221 254 -8 719 277 121 29 chr2 161358769 161359191 -89328663 - MLT1H LTR MaLR -16 533 4 192 209 0 0 chr2 161359658 161359701 -89328153 + MIR SINE MIR 65 107 -155 2330 79 0 3 chr2 161359714 161360005 -89327849 + AluSg SINE Alu 1 290 -20 186 191 0 106 chr2 161361184 161361231 -89326623 + MIR3 SINE MIR 147 188 -20 407 321 132 11 chr2 161361283 161361473 -89326381 + MIR SINE MIR 32 244 -18 312 301 78 13 chr2 161362212 161362365 -89325489 + MIR SINE MIR 63 225 -37 1955 143 0 6 chr2 161362745 161363059 -89324795 - AluSx SINE Alu 0 312 1 30 45 0 0 chr2 161363468 161363512 -89324342 + AT_rich Low_complexity Low_complexity 1 44 0 31 0 0 0 chr2 161363605 161363636 -89324218 + AT_rich Low_complexity Low_complexity 1 31 0 2393 66 3 13 chr2 161364165 161364466 -89323388 - AluY SINE Alu -13 298 1 21 36 0 0 chr2 161364635 161364663 -89323191 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 161365854 161365878 -89321976 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr2 161365909 161365936 -89321918 + AT_rich Low_complexity Low_complexity 1 27 0 251 155 35 0 chr2 161365939 161365997 -89321857 + L1ME4a LINE L1 6062 6121 0 324 167 12 60 chr2 161367653 161367737 -89320117 - MER116 DNA Mariner 0 80 1 221 0 35 0 chr2 161369297 161369326 -89318528 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 750 257 19 53 chr2 161370333 161370539 -89317315 + MIR SINE MIR 37 235 -27 449 338 80 28 chr2 161371869 161372230 -89315624 + L2 LINE L2 2632 3048 -265 26 74 0 0 chr2 161372233 161372287 -89315567 + AT_rich Low_complexity Low_complexity 1 54 0 197 351 63 36 chr2 161372678 161372789 -89315065 - L2 LINE L2 -55 3217 3104 192 246 18 35 chr2 161372894 161372951 -89314903 - L2 LINE L2 -289 2983 2928 749 190 7 21 chr2 161373796 161373938 -89313916 - Tigger3(Golem) DNA MER2_type -2 3027 2888 286 336 43 0 chr2 161375187 161375303 -89312551 - MARNA DNA Mariner -109 477 357 324 64 0 0 chr2 161376084 161376131 -89311723 + (TTGG)n Simple_repeat Simple_repeat 1 47 0 1277 156 14 92 chr2 161376131 161376420 -89311434 - AluJo SINE Alu -26 286 21 947 234 43 13 chr2 161376513 161376744 -89311110 - MIR SINE MIR -10 252 15 878 29 0 0 chr2 161377088 161377192 -89310662 - L1PA3 LINE L1 -3 6152 6049 21 0 0 0 chr2 161378249 161378270 -89309584 + AT_rich Low_complexity Low_complexity 1 21 0 200 33 0 33 chr2 161378584 161378614 -89309240 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 423 248 43 7 chr2 161380113 161380254 -89307600 - L1ME4a LINE L1 -3 6118 5973 204 303 0 15 chr2 161381121 161381187 -89306667 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 222 206 0 0 chr2 161382551 161382614 -89305240 + (ATG)n Simple_repeat Simple_repeat 3 65 0 233 286 286 18 chr2 161382701 161382869 -89304985 + MIR SINE MIR 1 213 -49 927 320 122 49 chr2 161383286 161384198 -89303656 - L2 LINE L2 -252 3020 1905 2866 154 82 11 chr2 161384198 161384723 -89303131 - MER68 LTR ERV1 0 562 1 927 320 122 49 chr2 161384723 161385235 -89302619 - L2 LINE L2 -1367 1905 1432 5016 135 26 52 chr2 161385717 161386828 -89301026 - L1MB1 LINE L1 -5 6163 5082 2397 76 3 0 chr2 161387391 161387692 -89300162 - AluSg SINE Alu -8 302 1 358 204 97 11 chr2 161389006 161389099 -89298755 - MIR SINE MIR -70 192 92 1557 173 69 0 chr2 161390009 161390286 -89297568 - AluJo SINE Alu -11 301 6 205 224 102 0 chr2 161390378 161390427 -89297427 + L2 LINE L2 3219 3272 0 1010 98 0 0 chr2 161391026 161391158 -89296696 + FLAM_C SINE Alu 12 143 0 1838 156 26 3 chr2 161391374 161391676 -89296178 - AluJb SINE Alu -3 309 1 357 248 120 34 chr2 161392990 161393107 -89294747 - L2 LINE L2 -17 3255 3129 244 286 36 60 chr2 161393425 161393509 -89294345 + L2 LINE L2 3099 3180 -92 1795 164 3 3 chr2 161393781 161394067 -89293787 + AluSx SINE Alu 1 286 -26 192 97 0 0 chr2 161394067 161394098 -89293756 + (CATA)n Simple_repeat Simple_repeat 2 32 0 2086 112 0 20 chr2 161394117 161394422 -89293432 + AluSp SINE Alu 1 299 -14 2310 58 41 7 chr2 161394553 161394846 -89293008 + AluY SINE Alu 1 303 -8 1228 72 1 2 chr2 161394874 161394900 -89292954 + L1P1 LINE L1 5583 5608 -547 3473 34 0 0 chr2 161394900 161395310 -89292544 - L1PA5 LINE L1 -8 6146 5737 1228 72 1 2 chr2 161395310 161395461 -89292393 + L1PA5 LINE L1 5608 5759 -396 263 203 165 38 chr2 161395481 161395560 -89292294 + MER5B DNA MER1_type 2 90 -88 181 276 40 53 chr2 161395500 161395576 -89292278 - MER5A DNA MER1_type -29 160 86 * 22 70 0 0 chr2 161396258 161396301 -89291553 + AT_rich Low_complexity Low_complexity 1 43 0 225 0 0 0 chr2 161396341 161396366 -89291488 + (T)n Simple_repeat Simple_repeat 1 25 0 181 349 28 37 chr2 161396430 161396539 -89291315 + MIR SINE MIR 101 208 -54 191 265 88 29 chr2 161396802 161396870 -89290984 - L2 LINE L2 -4 3309 3238 1087 204 15 5 chr2 161396874 161397075 -89290779 + AluJo SINE Alu 3 205 -107 2282 85 0 10 chr2 161397327 161397621 -89290233 - AluY SINE Alu -20 291 1 23 0 0 0 chr2 161397787 161397810 -89290044 + AT_rich Low_complexity Low_complexity 1 23 0 1575 173 85 0 chr2 161400555 161400827 -89287027 + AluJb SINE Alu 1 295 -17 32380 103 11 54 chr2 161403105 161409531 -89278323 - L1PA7 LINE L1 -1 6153 9 2032 136 3 0 chr2 161410574 161410861 -89276993 + AluSx SINE Alu 1 288 -24 23 0 0 0 chr2 161410861 161410884 -89276970 + AT_rich Low_complexity Low_complexity 1 23 0 3292 214 60 15 chr2 161411198 161411982 -89275872 - L1MEc LINE L1 -5543 853 35 314 260 20 62 chr2 161412040 161412186 -89275668 + L1MC4a LINE L1 5743 5882 -1926 909 137 0 0 chr2 161412234 161412365 -89275489 - FLAM_A SINE Alu -1 132 2 679 297 91 75 chr2 161412365 161412441 -89275413 - L2 LINE L2 -20 3293 3220 1737 172 14 14 chr2 161412441 161412738 -89275116 + AluJb SINE Alu 3 299 -13 679 297 91 75 chr2 161412738 161413184 -89274670 - L2 LINE L2 -93 3220 2763 516 303 108 43 chr2 161413452 161414154 -89273700 + L1ME4a LINE L1 5314 6072 -49 1390 19 0 0 chr2 161414154 161414315 -89273539 - L1PA3 LINE L1 0 6155 5995 516 303 108 43 chr2 161414315 161414347 -89273507 + L1ME4a LINE L1 6072 6100 -21 1904 142 3 20 chr2 161414352 161414648 -89273206 + AluSx SINE Alu 1 291 -21 23 33 0 0 chr2 161414667 161414697 -89273157 + AT_rich Low_complexity Low_complexity 1 30 0 1810 168 23 52 chr2 161416631 161416879 -89270975 - MER2 DNA MER2_type -3 342 105 2009 155 0 3 chr2 161416879 161417188 -89270666 - AluJo SINE Alu -4 308 1 1810 168 23 52 chr2 161417188 161417285 -89270569 - MER2 DNA MER2_type -240 105 7 579 261 155 0 chr2 161417783 161417990 -89269864 - MIR SINE MIR -4 258 20 1832 143 55 0 chr2 161418509 161418802 -89269052 - AluSx SINE Alu -3 309 1 6268 133 26 24 chr2 161419748 161419990 -89267864 - L1MA5A LINE L1 -2 6477 6237 2266 108 0 3 chr2 161419990 161420297 -89267557 - AluSp SINE Alu -7 306 1 6268 133 26 24 chr2 161420297 161420667 -89267187 - L1MA5A LINE L1 -242 6237 5869 2379 80 13 0 chr2 161420667 161420969 -89266885 - AluSp SINE Alu -7 306 1 6268 133 26 24 chr2 161420969 161421167 -89266687 - L1MA5A LINE L1 -610 5869 5673 2447 83 0 6 chr2 161421167 161421480 -89266374 - AluY SINE Alu 0 311 1 6268 133 26 24 chr2 161421480 161422639 -89265215 - L1MA5A LINE L1 -806 5673 4503 1557 140 5 0 chr2 161422639 161422861 -89264993 + AluJb SINE Alu 1 223 -89 1269 188 23 0 chr2 161422861 161423127 -89264727 - L1P LINE L1 -1463 4683 4412 4647 188 42 39 chr2 161423141 161425241 -89262613 - L1MA5A LINE L1 -2938 3390 1284 2960 156 4 8 chr2 161425232 161425737 -89262117 - L1MA4 LINE L1 -235 6065 5563 * 1634 161 0 14 chr2 161425730 161426010 -89261844 - L1MA5A LINE L1 -5009 319 44 * 233 255 0 0 chr2 161426022 161426069 -89261785 - L1MA5A LINE L1 -5269 59 13 300 388 85 38 chr2 161426183 161426606 -89261248 - L2 LINE L2 -5 3267 2825 487 259 73 121 chr2 161426681 161427036 -89260818 - L2 LINE L2 -5 3267 2930 21 57 0 0 chr2 161427222 161427257 -89260597 + AT_rich Low_complexity Low_complexity 1 35 0 2182 115 17 0 chr2 161429051 161429346 -89258508 - AluSq SINE Alu -13 300 1 2231 107 13 3 chr2 161429661 161429960 -89257894 - AluSx SINE Alu -10 302 1 902 206 17 17 chr2 161430150 161430325 -89257529 + FAM SINE Alu 1 175 0 24 32 0 0 chr2 161431843 161431874 -89255980 + AT_rich Low_complexity Low_complexity 1 31 0 1476 194 36 16 chr2 161432714 161433018 -89254836 - AluJo SINE Alu -2 310 1 198 316 26 0 chr2 161433094 161433170 -89254684 + L2 LINE L2 770 847 -2467 2537 287 138 21 chr2 161433183 161433550 -89254304 + L2 LINE L2 824 1147 -2167 1866 143 0 31 chr2 161433550 161433843 -89254011 + AluSx SINE Alu 3 286 -26 2537 287 138 21 chr2 161433843 161434356 -89253498 + L2 LINE L2 1147 1598 -1716 1435 200 17 10 chr2 161434356 161434646 -89253208 - AluJo SINE Alu -20 292 1 2537 287 138 21 chr2 161434646 161434931 -89252923 + L2 LINE L2 1598 2127 -1187 305 274 78 10 chr2 161434930 161435032 -89252822 + MIR SINE MIR 109 217 -45 * 216 97 0 0 chr2 161435675 161435706 -89252148 + (TATG)n Simple_repeat Simple_repeat 4 34 0 237 177 16 48 chr2 161435730 161435792 -89252062 + L1MC4 LINE L1 6656 6715 -1327 1177 194 44 88 chr2 161435795 161436066 -89251788 + MER2 DNA MER2_type 16 271 -74 2277 115 0 10 chr2 161436066 161436379 -89251475 - AluSx SINE Alu -2 310 1 1177 194 44 88 chr2 161436379 161436447 -89251407 + MER2 DNA MER2_type 271 340 -5 214 234 0 0 chr2 161436457 161436504 -89251350 + (CA)n Simple_repeat Simple_repeat 2 48 0 1111 278 34 12 chr2 161436514 161436838 -89251016 - MER102b DNA MER1_type -9 332 2 2207 131 0 3 chr2 161437130 161437443 -89250411 - AluSx SINE Alu 0 312 1 1047 146 12 6 chr2 161438005 161438169 -89249685 + AluJb SINE Alu 133 297 -15 289 384 130 0 chr2 161438496 161438642 -89249212 - MIR3 SINE MIR -12 196 32 2034 138 0 0 chr2 161439794 161440076 -89247778 + AluSx SINE Alu 1 282 -30 811 9 43 0 chr2 161440076 161440192 -89247662 + (TA)n Simple_repeat Simple_repeat 1 121 0 319 324 9 19 chr2 161440427 161440532 -89247322 - L2 LINE L2 -5 3267 3164 576 0 0 0 chr2 161440535 161440599 -89247255 + (TG)n Simple_repeat Simple_repeat 2 65 0 2331 90 10 3 chr2 161441393 161441704 -89246150 - AluSq SINE Alu 0 313 1 1924 138 28 0 chr2 161441940 161442230 -89245624 + AluSx SINE Alu 1 298 -14 1279 175 76 12 chr2 161442698 161442960 -89244894 + L1MB5 LINE L1 5881 6164 -10 5074 87 34 3 chr2 161443182 161443919 -89243935 - L1MA2 LINE L1 0 6304 5545 196 262 95 60 chr2 161446641 161446725 -89241129 - L2 LINE L2 -40 3232 3146 1807 136 30 4 chr2 161448185 161448488 -89239366 - AluSx SINE Alu 0 321 12 2561 52 7 0 chr2 161448507 161448814 -89239040 - AluY SINE Alu -2 309 1 380 284 81 55 chr2 161449283 161449437 -89238417 - L1MB8 LINE L1 -349 5829 5680 2344 214 52 12 chr2 161449437 161449956 -89237898 + MLT1F LTR MaLR 1 540 -2 380 284 81 55 chr2 161449956 161450111 -89237743 - L1MB8 LINE L1 -498 5680 5512 6928 57 20 0 chr2 161450205 161451860 -89235994 - L1PA7 LINE L1 -8 6146 4470 2137 125 0 3 chr2 161452451 161452755 -89235099 + AluSx SINE Alu 1 303 -9 234 346 51 13 chr2 161453055 161453211 -89234643 - MARNA DNA Mariner -105 481 320 1106 221 148 36 chr2 161453762 161454174 -89233680 + MLT1L LTR MaLR 127 584 -31 202 339 0 16 chr2 161454199 161454261 -89233593 - MER91 DNA MER1_type 0 140 80 1752 156 25 0 chr2 161454524 161454826 -89233028 - AluJo SINE Alu 0 309 1 2189 283 39 23 chr2 161454923 161455875 -89231979 + L1ME1 LINE L1 40 824 -5289 1500 241 32 63 chr2 161455905 161456462 -89231392 + L1ME1 LINE L1 3835 4374 -1841 428 222 40 40 chr2 161456449 161456625 -89231229 + L1ME1 LINE L1 5180 5355 -860 * 2700 218 83 23 chr2 161456631 161457403 -89230451 + L1ME1 LINE L1 5411 6228 -7 2210 115 0 0 chr2 161457812 161458100 -89229754 + AluSc SINE Alu 1 288 -21 201 129 0 0 chr2 161458134 161458165 -89229689 + (TTG)n Simple_repeat Simple_repeat 3 33 0 387 328 132 41 chr2 161458337 161458384 -89229470 + L2 LINE L2 2194 2235 -1079 1723 150 126 3 chr2 161458384 161458710 -89229144 + MER47A DNA MER2_type 1 366 0 387 328 132 41 chr2 161458710 161459055 -89228799 + L2 LINE L2 2235 2622 -692 2189 109 0 22 chr2 161459104 161459416 -89228438 + AluSx SINE Alu 1 305 -7 254 118 0 0 chr2 161459416 161459450 -89228404 + U2 snRNA snRNA 2 35 -153 848 148 0 7 chr2 161459453 161459602 -89228252 - L1MB3 LINE L1 -7 6176 6029 9208 158 31 2 chr2 161459604 161461258 -89226596 - L1P LINE L1 -2399 3747 2047 1337 163 14 62 chr2 161461269 161461558 -89226296 + L1PA11 LINE L1 5060 5334 -812 1613 107 0 0 chr2 161461558 161461764 -89226090 + AluSx SINE Alu 5 210 -102 5045 87 14 5 chr2 161461762 161462417 -89225437 + L1PA11 LINE L1 5513 6173 -1 1279 112 73 0 chr2 161462664 161462749 -89225105 + L1MA9 LINE L1 6067 6144 -168 408 104 0 0 chr2 161462749 161462816 -89225038 + (CA)n Simple_repeat Simple_repeat 1 67 0 1279 112 73 0 chr2 161462816 161462936 -89224918 + L1MA9 LINE L1 6144 6287 -25 851 161 15 0 chr2 161462944 161463081 -89224773 - L1MB3 LINE L1 -146 6037 5899 7506 214 26 28 chr2 161463081 161464186 -89223668 + L1MB7 LINE L1 3220 4325 -1821 3794 143 18 12 chr2 161464186 161464787 -89223067 + MER6A DNA MER2_type 1 605 0 7506 214 26 28 chr2 161464787 161465491 -89222363 + L1MB7 LINE L1 4325 5028 -1118 2245 102 0 0 chr2 161465491 161465784 -89222070 - AluSg SINE Alu -17 293 1 7506 214 26 28 chr2 161465784 161465907 -89221947 + L1MB7 LINE L1 5028 5150 -996 3300 193 58 9 chr2 161465905 161466600 -89221254 + L1MB7 LINE L1 5437 6165 -19 * 2122 157 42 14 chr2 161466607 161467035 -89220819 - LTR7 LTR ERV1 -8 442 3 1609 184 7 7 chr2 161467193 161467541 -89220313 + AluJo SINE Alu 3 350 0 470 178 51 34 chr2 161467644 161467762 -89220092 + MER65A LTR ERV1 9 128 -317 846 172 80 6 chr2 161467900 161468063 -89219791 - FRAM SINE Alu -7 169 1 879 132 21 7 chr2 161469474 161469618 -89218236 - MER50 LTR ERV1 -23 711 566 2033 148 0 19 chr2 161469620 161469938 -89217916 + AluJb SINE Alu 1 312 0 12777 52 78 4 chr2 161470089 161471759 -89216095 + L1P LINE L1 1 1793 -4353 7599 5 0 0 chr2 161471756 161472587 -89215267 + L1HS LINE L1 5325 6155 0 * 213 39 0 0 chr2 161472587 161472613 -89215241 + (A)n Simple_repeat Simple_repeat 1 26 0 1527 244 201 4 chr2 161472665 161473157 -89214697 - MLT1G1 LTR MaLR -5 590 2 1287 129 5 49 chr2 161473696 161473920 -89213934 + AluJo SINE Alu 1 214 -98 208 51 26 26 chr2 161473922 161473961 -89213893 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 294 247 27 0 chr2 161474535 161474608 -89213246 - L1ME3A LINE L1 -15 6155 6081 1332 20 0 0 chr2 161474963 161475109 -89212745 + L1PA4 LINE L1 6007 6152 -3 2213 91 10 0 chr2 161475142 161475440 -89212414 + AluY SINE Alu 1 301 -10 2219 108 0 3 chr2 161475558 161475854 -89212000 - AluSx SINE Alu -17 295 1 1909 105 0 4 chr2 161476259 161476517 -89211337 + AluSx SINE Alu 43 299 -13 654 241 187 98 chr2 161476525 161476686 -89211168 + L1ME4a LINE L1 5460 5605 -516 2156 115 0 10 chr2 161476686 161476991 -89210863 - AluSx SINE Alu -10 302 1 654 241 187 98 chr2 161476991 161477432 -89210422 + L1ME4a LINE L1 5605 6116 -5 1650 169 4 4 chr2 161479521 161479799 -89208055 - AluJb SINE Alu -32 280 3 534 271 227 29 chr2 161480043 161480493 -89207361 - L2 LINE L2 -8 3305 2759 1988 133 13 3 chr2 161481113 161481415 -89206439 + AluSx SINE Alu 1 305 -7 660 135 143 8 chr2 161481419 161481545 -89206309 + MER1B DNA MER1_type 5 147 -150 1111 123 19 0 chr2 161481656 161481810 -89206044 - AluSg/x SINE Alu -30 282 126 1142 118 34 0 chr2 161481828 161482006 -89205848 + MER1B DNA MER1_type 156 339 0 2499 61 0 0 chr2 161482733 161483027 -89204827 + AluY SINE Alu 1 294 -17 2137 106 0 16 chr2 161483232 161483535 -89204319 - AluSq SINE Alu -15 298 1 986 165 13 0 chr2 161483818 161483976 -89203878 + FRAM SINE Alu 1 156 -20 2843 0 0 0 chr2 161484515 161484815 -89203039 - AluYa5 SINE Alu -11 300 1 909 173 237 15 chr2 161486086 161486354 -89201500 - MER33 DNA MER1_type 0 363 1 221 279 20 48 chr2 161486681 161486828 -89201026 + L2 LINE L2 3098 3240 -73 22 0 0 0 chr2 161487662 161487684 -89200170 + AT_rich Low_complexity Low_complexity 1 22 0 1505 166 69 11 chr2 161488209 161488486 -89199368 - AluJo SINE Alu -19 293 1 2257 102 3 10 chr2 161488866 161489169 -89198685 + AluSg SINE Alu 1 301 -9 22 0 0 0 chr2 161489563 161489585 -89198269 + AT_rich Low_complexity Low_complexity 1 22 0 305 282 124 38 chr2 161489800 161490009 -89197845 - HAL1 LINE L1 -4 2503 2277 597 257 259 23 chr2 161490014 161490536 -89197318 - HAL1 LINE L1 -1119 1388 744 883 176 0 0 chr2 161490861 161491003 -89196851 - AluJo SINE Alu -170 142 1 2128 125 10 0 chr2 161491505 161491808 -89196046 + AluSx SINE Alu 1 306 -6 203 270 0 0 chr2 161492028 161492065 -89195789 + L2 LINE L2 3192 3228 -44 3097 142 19 60 chr2 161492704 161493239 -89194615 + LTR64 LTR ERVK 1 513 0 1893 268 73 28 chr2 161493617 161494451 -89193403 - L1ME3A LINE L1 -98 6072 5195 1449 247 227 42 chr2 161494551 161495588 -89192266 - L1ME3A LINE L1 -1166 4980 3753 2221 113 0 7 chr2 161495831 161496158 -89191696 + AluSg SINE Alu 1 310 0 1201 188 10 0 chr2 161496209 161496417 -89191437 - MER58A DNA MER1_type -8 216 7 270 307 42 40 chr2 161496519 161496672 -89191182 - MIR SINE MIR -69 139 7 1504 187 61 56 chr2 161496913 161497082 -89190772 - L1MC3 LINE L1 0 7785 7618 2473 60 0 3 chr2 161497082 161497382 -89190472 - AluY SINE Alu -12 299 1 1504 187 61 56 chr2 161497382 161497608 -89190246 - L1MC3 LINE L1 -167 7618 7388 1211 177 29 150 chr2 161497656 161498108 -89189746 - L1MC3 LINE L1 -351 7434 7038 25 0 0 0 chr2 161500044 161500069 -89187785 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 161500270 161500295 -89187559 + AT_rich Low_complexity Low_complexity 1 25 0 1637 144 27 19 chr2 161500331 161500587 -89187267 - AluJb SINE Alu -54 258 1 487 215 156 7 chr2 161500617 161500752 -89187102 - MLT1D LTR MaLR -350 155 1 384 261 85 76 chr2 161500770 161500981 -89186873 - MLT1J LTR MaLR -201 310 98 1860 134 36 0 chr2 161501034 161501309 -89186545 - AluSq SINE Alu -27 286 2 318 185 46 85 chr2 161501427 161501557 -89186297 - LTR37A LTR ERV1 -264 162 38 2006 153 0 0 chr2 161501623 161501924 -89185930 - AluJb SINE Alu -11 301 1 918 215 129 22 chr2 161502141 161502452 -89185402 - L1ME1 LINE L1 -15 6151 5808 740 210 18 0 chr2 161502450 161502620 -89185234 - L1M3 LINE L1 -573 5610 5431 * 2035 114 50 0 chr2 161503762 161504042 -89183812 + AluSx SINE Alu 1 294 -18 413 137 14 0 chr2 161504074 161504147 -89183707 - MER5A DNA MER1_type -96 93 20 1613 157 30 40 chr2 161504429 161504729 -89183125 - AluJb SINE Alu -15 297 1 1437 190 110 116 chr2 161505011 161505290 -89182564 - MLT1E2 LTR MaLR 0 626 347 2220 78 18 3 chr2 161505290 161505574 -89182280 - AluSx SINE Alu -24 288 1 1437 190 110 116 chr2 161505574 161505925 -89181929 - MLT1E2 LTR MaLR -279 347 3 190 326 0 0 chr2 161506539 161506588 -89181266 + L2 LINE L2 3264 3312 -1 1427 113 35 1 chr2 161506811 161507567 -89180287 + L1PA10 LINE L1 5304 6168 0 180 77 0 0 chr2 161509813 161509839 -89178015 + (TTG)n Simple_repeat Simple_repeat 2 27 0 616 138 138 0 chr2 161510436 161510530 -89177324 - FRAM SINE Alu -69 107 1 595 236 121 59 chr2 161510534 161510890 -89176964 - HAL1 LINE L1 -1588 919 542 397 367 112 33 chr2 161510990 161511420 -89176434 - HAL1 LINE L1 -2042 465 2 338 318 127 27 chr2 161511744 161511964 -89175890 + MIR SINE MIR 11 252 -10 1797 130 25 35 chr2 161512154 161512479 -89175375 - AluSx SINE Alu 0 322 1 1162 162 0 0 chr2 161513030 161513209 -89174645 - FRAM SINE Alu -2 174 1 1730 160 13 27 chr2 161513994 161514158 -89173696 - AluJb SINE Alu -16 296 136 2327 87 3 10 chr2 161514158 161514468 -89173386 - AluSg SINE Alu -2 308 1 1730 160 13 27 chr2 161514468 161514603 -89173251 - AluJb SINE Alu -176 136 1 2395 202 110 23 chr2 161514611 161515234 -89172620 - L1MB8 LINE L1 0 6178 5514 432 0 0 0 chr2 161515688 161515736 -89172118 + (TG)n Simple_repeat Simple_repeat 1 48 0 685 216 0 0 chr2 161518771 161518896 -89168958 + FLAM_C SINE Alu 1 125 -18 1705 203 3 0 chr2 161519626 161519932 -89167922 + AluJo SINE Alu 1 307 -5 2343 122 0 0 chr2 161520372 161520676 -89167178 - AluSq SINE Alu -9 304 1 1204 188 50 13 chr2 161520738 161520977 -89166877 - MLT1A1 LTR MaLR 0 365 118 3660 189 68 57 chr2 161521880 161522467 -89165387 + Charlie1a DNA MER1_type 1 605 -2156 2315 110 3 0 chr2 161522467 161522777 -89165077 + AluSx SINE Alu 1 311 -1 3660 189 68 57 chr2 161522777 161523143 -89164711 + Charlie1a DNA MER1_type 605 965 -490 758 117 17 8 chr2 161523144 161523264 -89164590 + FLAM_C SINE Alu 23 143 0 1451 167 102 75 chr2 161523272 161523751 -89164103 + Charlie1a DNA MER1_type 960 1451 -4 2097 109 0 65 chr2 161524060 161524382 -89163472 - AluSx SINE Alu -11 301 1 2488 87 3 0 chr2 161526216 161526526 -89161328 - AluSq SINE Alu -2 311 1 294 309 32 16 chr2 161530773 161530896 -89156958 + MIR3 SINE MIR 33 157 -51 206 425 18 0 chr2 161530899 161531012 -89156842 + MER5B DNA MER1_type 1 115 -63 1166 162 40 47 chr2 161531518 161531771 -89156083 - L1MB8 LINE L1 -11 6167 5917 1579 172 25 47 chr2 161532150 161532469 -89155385 - AluJo SINE Alu 0 312 1 189 147 29 0 chr2 161536133 161536167 -89151687 - L2 LINE L2 -12 3301 3267 1862 147 3 17 chr2 161537759 161538059 -89149795 + AluJo SINE Alu 1 296 -16 218 297 14 14 chr2 161538119 161538193 -89149661 + MIR SINE MIR 165 238 -24 1762 124 30 8 chr2 161538876 161539143 -89148711 + AluJb SINE Alu 28 300 -12 243 0 0 0 chr2 161539377 161539404 -89148450 + (TG)n Simple_repeat Simple_repeat 1 27 0 * 396 0 0 0 chr2 161539403 161539447 -89148407 + (GA)n Simple_repeat Simple_repeat 1 44 0 738 197 0 15 chr2 161539560 161539692 -89148162 + FLAM_A SINE Alu 1 130 -3 180 225 25 0 chr2 161541256 161541296 -89146558 + L2 LINE L2 3216 3256 -16 281 200 36 0 chr2 161541570 161541625 -89146229 - L2 LINE L2 0 3272 3216 383 294 7 15 chr2 161543321 161543457 -89144397 + MIR3 SINE MIR 73 207 -1 1105 196 46 1 chr2 161543877 161544174 -89143680 - MER2 DNA MER2_type 0 345 2 2175 113 3 10 chr2 161547985 161548287 -89139567 - AluSx SINE Alu -12 300 1 2326 108 7 0 chr2 161549396 161549692 -89138162 + AluSq SINE Alu 1 298 -15 1546 151 34 0 chr2 161551035 161551274 -89136580 + AluJo SINE Alu 1 247 -65 2275 108 0 0 chr2 161551275 161551572 -89136282 + AluSx SINE Alu 16 312 0 426 227 136 68 chr2 161552822 161553006 -89134848 + MER112 DNA MER1_type 3 206 -54 2148 127 0 7 chr2 161553006 161553314 -89134540 + AluSx SINE Alu 1 306 -6 426 227 136 68 chr2 161553314 161553349 -89134505 + MER112 DNA MER1_type 206 237 -23 207 211 56 67 chr2 161553580 161553670 -89134184 + MIR SINE MIR 37 125 -83 23 33 0 0 chr2 161554369 161554399 -89133455 + AT_rich Low_complexity Low_complexity 1 30 0 2350 99 0 0 chr2 161556593 161556895 -89130959 - AluSx SINE Alu -10 302 1 602 214 76 27 chr2 161557437 161557661 -89130193 + L1ME3A LINE L1 5931 6165 -5 398 185 12 0 chr2 161560269 161560350 -89127504 + MER96 DNA MER1_type? 1 82 -93 2382 66 7 7 chr2 161560979 161561282 -89126572 - AluY SINE Alu -8 303 1 2198 93 10 30 chr2 161561604 161561906 -89125948 + AluSq SINE Alu 1 296 -17 979 238 158 38 chr2 161561913 161562527 -89125327 - L1MC5 LINE L1 -98 7863 7176 605 270 93 19 chr2 161563711 161563926 -89123928 + MIR SINE MIR 16 246 -16 234 355 159 0 chr2 161565262 161565369 -89122485 - L2 LINE L2 0 3313 3190 343 246 30 75 chr2 161565844 161565978 -89121876 - L1MC5 LINE L1 -435 7526 7399 622 118 157 0 chr2 161565978 161566080 -89121774 - FRAM SINE Alu -49 127 10 1243 151 0 5 chr2 161566139 161566338 -89121516 + AluSg/x SINE Alu 94 291 -21 237 323 52 21 chr2 161567248 161567344 -89120510 - MIR SINE MIR -88 174 76 282 290 81 59 chr2 161568679 161568865 -89118989 + MIR SINE MIR 64 253 -9 370 272 122 7 chr2 161569224 161569371 -89118483 - MIR SINE MIR -22 240 77 521 261 111 0 chr2 161569428 161569581 -89118273 + MER5B DNA MER1_type 6 175 -3 238 287 7 4 chr2 161569838 161569917 -89117937 - MIR SINE MIR -79 129 50 2272 103 0 0 chr2 161570225 161570537 -89117317 - AluSq SINE Alu -1 312 1 280 278 181 30 chr2 161571022 161571288 -89116566 - L2 LINE L2 -199 3114 2809 819 151 0 0 chr2 161572008 161572134 -89115720 - FLAM_C SINE Alu -17 126 1 526 190 116 16 chr2 161572189 161572310 -89115544 + MER5A DNA MER1_type 1 133 -56 2041 115 3 3 chr2 161572323 161572635 -89115219 - AluSx SINE Alu 0 312 1 2708 174 38 5 chr2 161572651 161573203 -89114651 - L1MB2 LINE L1 -2 6169 5600 2322 76 7 0 chr2 161573203 161573506 -89114348 - AluSc SINE Alu -4 305 1 933 163 6 6 chr2 161573530 161573696 -89114158 - FAM SINE Alu -7 42 1 449 106 26 18 chr2 161573703 161573791 -89114063 - L1MB2 LINE L1 -554 5614 5529 290 196 20 0 chr2 161573794 161573845 -89114009 + MER5A DNA MER1_type 138 189 0 537 272 48 20 chr2 161574610 161574757 -89113097 + MIR SINE MIR 35 185 -77 1868 144 17 0 chr2 161574813 161575105 -89112749 - AluSx SINE Alu -15 297 1 225 0 0 0 chr2 161577290 161577315 -89110539 + (CA)n Simple_repeat Simple_repeat 2 26 0 1726 208 86 47 chr2 161577541 161578027 -89109827 - MLT1D LTR MaLR 0 505 1 210 263 74 63 chr2 161579869 161579964 -89107890 + MIR SINE MIR 2 97 -165 201 235 88 29 chr2 161579970 161580038 -89107816 - MER5A DNA MER1_type -75 114 43 793 248 44 9 chr2 161580345 161580539 -89107315 - MLT1E LTR MaLR -53 514 298 2137 118 0 0 chr2 161582885 161583190 -89104664 - AluSc SINE Alu -4 305 1 1708 147 0 45 chr2 161583250 161583562 -89104292 - AluJb SINE Alu -14 298 1 953 173 99 11 chr2 161583636 161583827 -89104027 + MER3 DNA MER1_type 2 209 0 1598 193 46 21 chr2 161585105 161585431 -89102423 + MER7A DNA MER2_type 1 332 -14 2266 88 7 0 chr2 161587105 161587413 -89100441 + AluSg SINE Alu 1 310 0 436 275 73 28 chr2 161587438 161587616 -89100238 + MIR SINE MIR 77 262 0 515 356 24 24 chr2 161587641 161587888 -89099966 + MIR SINE MIR 15 261 -1 22 0 0 0 chr2 161587906 161587928 -89099926 + AT_rich Low_complexity Low_complexity 1 22 0 1590 162 115 17 chr2 161588476 161588772 -89099082 - MER7A DNA MER2_type -23 323 1 607 301 61 29 chr2 161589327 161589639 -89098215 - Tigger8 DNA MER2_type -89 577 256 1974 102 0 21 chr2 161590239 161590553 -89097301 - AluSc SINE Alu 0 311 4 2265 88 3 0 chr2 161590562 161590856 -89096998 - AluSx SINE Alu -17 295 1 2423 145 131 20 chr2 161592131 161592325 -89095529 - MER34C LTR ERV1 0 585 414 2170 99 3 3 chr2 161592325 161592627 -89095227 + AluSg SINE Alu 1 302 -8 2423 145 131 20 chr2 161592627 161592928 -89094926 - MER34C LTR ERV1 -171 414 35 2242 94 3 0 chr2 161593529 161593827 -89094027 + AluSx SINE Alu 1 299 -13 255 225 135 72 chr2 161593975 161594086 -89093768 - MIR3 SINE MIR -53 155 38 362 344 80 24 chr2 161595413 161595826 -89092028 - L1ME3A LINE L1 -229 5941 5506 1042 252 58 33 chr2 161596740 161597131 -89090723 - MLT1G1 LTR MaLR -130 465 19 185 56 0 56 chr2 161597743 161597779 -89090075 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 396 0 0 0 chr2 161599663 161599707 -89088147 + (TG)n Simple_repeat Simple_repeat 2 45 0 2171 101 13 7 chr2 161599979 161600287 -89087567 - AluSg SINE Alu 0 310 1 1519 152 67 7 chr2 161600296 161600565 -89087289 - AluJb SINE Alu -25 287 3 2479 135 65 32 chr2 161600571 161600754 -89087100 - L1MA7 LINE L1 0 6291 6115 1681 115 3 91 chr2 161600754 161601085 -89086769 + AluSq SINE Alu 1 302 -11 2479 135 65 32 chr2 161601085 161601396 -89086458 - L1MA7 LINE L1 -176 6115 5781 3617 174 35 62 chr2 161601920 161602586 -89085268 - L1MB2 LINE L1 0 6171 5536 2168 109 3 0 chr2 161602586 161602890 -89084964 - AluSx SINE Alu -7 305 1 3617 174 35 62 chr2 161602890 161603153 -89084701 - L1MB2 LINE L1 -635 5536 5267 197 228 76 13 chr2 161604327 161604406 -89083448 - MER5B DNA MER1_type -94 84 1 409 267 118 18 chr2 161604673 161604894 -89082960 - MIR SINE MIR -7 255 13 1916 128 42 0 chr2 161605585 161605873 -89081981 + AluSx SINE Alu 1 300 -12 990 232 66 5 chr2 161606393 161606604 -89081250 - MER58A DNA MER1_type 0 224 1 247 281 217 35 chr2 161608131 161608444 -89079410 + L2 LINE L2 1441 1810 -1504 267 231 64 13 chr2 161609043 161609121 -89078733 + MIR SINE MIR 21 102 -160 266 226 71 0 chr2 161611363 161611447 -89076407 - MARNA DNA Mariner -239 347 258 2146 76 59 0 chr2 161613403 161613691 -89074163 + AluSc SINE Alu 1 305 -4 2044 61 90 7 chr2 161613730 161614008 -89073846 + AluY SINE Alu 1 301 -10 1805 144 17 0 chr2 161614195 161614493 -89073361 + AluSg SINE Alu 1 303 -7 1446 126 158 4 chr2 161616336 161616606 -89071248 - AluSq SINE Alu 0 308 1 2156 122 0 3 chr2 161616923 161617219 -89070635 + AluSx SINE Alu 1 295 -17 250 143 0 0 chr2 161617447 161617489 -89070365 - L1MC/D LINE L1 -607 5752 5711 949 188 171 30 chr2 161617571 161617875 -89069979 - L1MC/D LINE L1 -2155 5653 5307 485 335 113 20 chr2 161618016 161618031 -89069823 - L1MC/D LINE L1 -1104 5042 5030 441 194 136 10 chr2 161618031 161618134 -89069720 - FLAM_A SINE Alu -17 116 1 485 335 113 20 chr2 161618134 161618613 -89069241 - L1MC/D LINE L1 -1116 5030 4502 1682 186 0 17 chr2 161618696 161618992 -89068862 - AluJo SINE Alu -21 291 1 712 146 9 0 chr2 161619327 161619437 -89068417 + AluJb SINE Alu 1 111 -201 1816 174 285 2 chr2 161619642 161620263 -89067591 - L1MB7 LINE L1 -15 6169 5373 879 235 25 15 chr2 161620282 161620482 -89067372 - MIR SINE MIR -42 220 19 316 221 96 52 chr2 161620499 161620635 -89067219 + L1ME1 LINE L1 911 1052 -5067 1720 142 0 0 chr2 161621018 161621257 -89066597 + AluSx SINE Alu 54 292 -20 1052 107 0 0 chr2 161621393 161621533 -89066321 - AluSg/x SINE Alu -7 305 166 2351 75 0 23 chr2 161621737 161622042 -89065812 - AluY SINE Alu -13 298 1 1997 109 46 3 chr2 161622070 161622354 -89065500 + AluSq SINE Alu 1 296 -17 1049 203 163 9 chr2 161622880 161623294 -89064560 + L1MD2 LINE L1 5863 6242 0 369 274 26 0 chr2 161623306 161623419 -89064435 + L1ME3A LINE L1 5458 5573 -589 750 175 196 4 chr2 161623438 161623678 -89064176 + L1ME3A LINE L1 5635 5920 -250 656 186 153 19 chr2 161623743 161623958 -89063896 + L1ME1 LINE L1 3933 4176 -1953 442 170 48 18 chr2 161624020 161624178 -89063676 - MER2 DNA MER2_type -4 341 114 1623 180 10 27 chr2 161624328 161624628 -89063226 + AluJo SINE Alu 1 295 -17 2101 217 132 26 chr2 161624697 161624930 -89062924 + L1ME1 LINE L1 4470 4677 -1472 1952 133 0 20 chr2 161624930 161625232 -89062622 + AluSx SINE Alu 1 296 -16 2101 217 132 26 chr2 161625232 161625836 -89062018 + L1ME1 LINE L1 4677 5216 -933 2472 70 0 0 chr2 161625836 161626134 -89061720 + AluY SINE Alu 1 298 -13 2101 217 132 26 chr2 161626134 161626566 -89061288 + L1ME1 LINE L1 5216 5879 -270 251 304 14 0 chr2 161626867 161626936 -89060918 - MIR SINE MIR -5 257 188 362 351 92 50 chr2 161627019 161627495 -89060359 + L1ME LINE L1 5310 5805 -299 450 49 0 0 chr2 161627568 161627629 -89060225 + (TA)n Simple_repeat Simple_repeat 1 61 0 1986 142 0 10 chr2 161628302 161628591 -89059263 - AluJb SINE Alu -26 286 1 474 202 223 34 chr2 161629190 161629428 -89058426 + LTR40a LTR ERVL 1 283 -236 2022 125 0 70 chr2 161629469 161629796 -89058058 + AluSx SINE Alu 1 304 -8 315 282 129 12 chr2 161630338 161630508 -89057346 - L2 LINE L2 -2235 1079 890 1925 158 3 16 chr2 161630667 161630978 -89056876 + AluJo SINE Alu 1 307 -5 31 0 0 0 chr2 161631816 161631847 -89056007 + AT_rich Low_complexity Low_complexity 1 31 0 1827 167 0 3 chr2 161633963 161634256 -89053598 + AluJb SINE Alu 1 292 -20 1764 160 7 4 chr2 161634535 161634810 -89053044 + AluJo SINE Alu 2 277 -35 2398 89 0 0 chr2 161634871 161635165 -89052689 + AluY SINE Alu 1 297 -14 192 40 0 0 chr2 161635165 161635190 -89052664 + (TTAAA)n Simple_repeat Simple_repeat 2 26 0 1077 130 65 5 chr2 161635526 161635767 -89052087 + L1M4 LINE L1 5231 5485 -693 693 215 8 0 chr2 161636169 161636299 -89051555 + FLAM_A SINE Alu 1 131 -2 21 0 0 0 chr2 161636355 161636376 -89051478 + AT_rich Low_complexity Low_complexity 1 21 0 1697 179 0 10 chr2 161636697 161636987 -89050867 - AluJb SINE Alu -25 287 1 2245 113 0 3 chr2 161637073 161637373 -89050481 - AluSq SINE Alu -14 299 1 22 0 0 0 chr2 161637586 161637608 -89050246 + AT_rich Low_complexity Low_complexity 1 22 0 2088 130 3 3 chr2 161638062 161638363 -89049491 + AluSx SINE Alu 1 301 -11 1982 144 0 3 chr2 161638718 161639010 -89048844 - AluSx SINE Alu -21 291 1 1993 134 3 14 chr2 161639707 161639998 -89047856 + AluSg SINE Alu 1 288 -22 1183 199 84 16 chr2 161640752 161641073 -89046781 - MER2 DNA MER2_type -2 343 1 547 161 8 51 chr2 161641316 161641434 -89046420 + L1M3e LINE L1 1 113 -6917 450 0 0 0 chr2 161641533 161641583 -89046271 + (TA)n Simple_repeat Simple_repeat 2 51 0 288 0 0 0 chr2 161641583 161641615 -89046239 + (T)n Simple_repeat Simple_repeat 1 32 0 664 279 54 38 chr2 161643545 161643785 -89044069 - MIR SINE MIR -11 251 8 2380 100 0 0 chr2 161644487 161644818 -89043036 + AluSq SINE Alu 1 313 0 665 230 115 0 chr2 161644826 161644965 -89042889 + AluJb SINE Alu 132 286 -26 269 26 26 0 chr2 161644970 161645008 -89042846 + (CA)n Simple_repeat Simple_repeat 1 39 0 1623 151 94 0 chr2 161645135 161645400 -89042454 + AluJb SINE Alu 1 290 -22 225 216 0 0 chr2 161645570 161645621 -89042233 + Charlie1 DNA MER1_type 157 207 -2554 * 602 111 0 20 chr2 161645620 161645719 -89042135 + Charlie1 DNA MER1_type 2432 2528 -233 554 177 39 0 chr2 161645745 161645875 -89041979 + Charlie1 DNA MER1_type 2595 2729 -32 2404 62 0 0 chr2 161645883 161646173 -89041681 - AluY SINE Alu -21 290 1 276 184 0 0 chr2 161646185 161646234 -89041620 + Charlie1 DNA MER1_type 2713 2761 0 1915 158 3 0 chr2 161646455 161646758 -89041096 - AluJo SINE Alu -8 304 1 1905 160 3 22 chr2 161646977 161647289 -89040565 - AluJo SINE Alu -6 306 1 369 267 57 68 chr2 161648533 161648851 -89039003 + L1ME3A LINE L1 1011 1344 -5052 2371 108 0 0 chr2 161648851 161649156 -89038698 - AluSx SINE Alu -7 305 1 369 267 57 68 chr2 161649156 161649334 -89038520 + L1ME3A LINE L1 1344 1522 -4874 784 267 97 19 chr2 161649372 161649784 -89038070 + L1ME3A LINE L1 3874 4317 -1898 536 207 37 83 chr2 161649916 161650133 -89037721 + L1ME3A LINE L1 4549 4755 -1460 456 239 75 52 chr2 161650146 161650359 -89037495 + L1ME3A LINE L1 4832 5049 -1166 1566 276 81 14 chr2 161650553 161651291 -89036563 + L1ME3A LINE L1 5352 6139 -100 2841 142 19 60 chr2 161651671 161652206 -89035648 - LTR64 LTR ERVK 0 513 1 204 270 0 0 chr2 161652845 161652882 -89034972 - L2 LINE L2 -44 3228 3192 2134 125 10 0 chr2 161653102 161653405 -89034449 - AluSx SINE Alu -6 306 1 894 176 0 0 chr2 161653907 161654049 -89033805 + AluJo SINE Alu 1 142 -170 456 270 144 18 chr2 161654570 161654896 -89032958 + HAL1 LINE L1 1022 1388 -1119 315 282 124 38 chr2 161654901 161655110 -89032744 + HAL1 LINE L1 2277 2503 -4 22 0 0 0 chr2 161655325 161655347 -89032507 + AT_rich Low_complexity Low_complexity 1 22 0 2265 102 3 10 chr2 161655741 161656045 -89031809 - AluSg SINE Alu -8 302 1 1516 166 69 11 chr2 161656425 161656702 -89031152 + AluJo SINE Alu 1 293 -19 22 0 0 0 chr2 161657227 161657249 -89030605 + AT_rich Low_complexity Low_complexity 1 22 0 236 279 20 48 chr2 161658083 161658230 -89029624 - L2 LINE L2 -73 3240 3098 791 173 237 15 chr2 161658557 161658825 -89029029 + MER33 DNA MER1_type 1 363 0 2906 0 0 0 chr2 161660096 161660407 -89027447 + AluYa5 SINE Alu 1 311 0 21 0 0 0 chr2 161660407 161660428 -89027426 + AT_rich Low_complexity Low_complexity 1 21 0 989 165 13 0 chr2 161660964 161661122 -89026732 - FRAM SINE Alu -20 156 1 2133 106 0 16 chr2 161661405 161661708 -89026146 + AluSq SINE Alu 1 298 -15 2457 65 0 0 chr2 161661913 161662207 -89025647 - AluY SINE Alu -17 294 1 1062 118 34 0 chr2 161662934 161663112 -89024742 - MER1B DNA MER1_type 0 339 156 1115 123 19 0 chr2 161663130 161663284 -89024570 + AluSg/x SINE Alu 124 280 -30 615 135 143 8 chr2 161663395 161663521 -89024333 - MER1B DNA MER1_type -150 147 5 1984 133 13 3 chr2 161663525 161663827 -89024027 - AluSx SINE Alu -7 305 1 535 274 220 30 chr2 161664447 161664897 -89022957 + L2 LINE L2 2759 3305 -8 1651 169 4 4 chr2 161665141 161665419 -89022435 + AluJb SINE Alu 3 280 -32 349 240 118 25 chr2 161667656 161667860 -89019994 - L1ME4a LINE L1 -222 5899 5677 488 308 63 14 chr2 161667890 161667949 -89019905 - L1ME4a LINE L1 -430 5691 5636 2157 115 0 10 chr2 161667949 161668254 -89019600 + AluSx SINE Alu 1 302 -10 488 308 63 14 chr2 161668254 161668415 -89019439 - L1ME4a LINE L1 -485 5636 5460 1905 105 0 4 chr2 161668423 161668681 -89019173 - AluSx SINE Alu -13 299 43 2221 108 0 3 chr2 161669086 161669382 -89018472 + AluSx SINE Alu 1 295 -17 2202 91 10 0 chr2 161669500 161669798 -89018056 - AluY SINE Alu -10 301 1 1247 20 0 0 chr2 161669831 161669977 -89017877 - L1PA4 LINE L1 -3 6152 6007 268 247 27 0 chr2 161670332 161670405 -89017449 + L1ME3A LINE L1 6081 6155 -15 208 51 26 26 chr2 161670979 161671018 -89016836 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1275 129 5 49 chr2 161671020 161671244 -89016610 - AluJo SINE Alu -98 214 1 1341 246 201 4 chr2 161671783 161672275 -89015579 + MLT1G1 LTR MaLR 2 590 -5 2067 148 0 19 chr2 161672471 161672789 -89015065 - AluJb SINE Alu 0 312 1 811 132 21 7 chr2 161672791 161672935 -89014919 + MER50 LTR ERV1 566 711 -23 851 173 80 6 chr2 161674346 161674508 -89013346 + FRAM SINE Alu 1 168 -8 417 178 51 34 chr2 161674646 161674764 -89013090 - MER65B LTR ERV1 -403 128 9 194 85 0 64 chr2 161674867 161674914 -89012940 + (TTTTTG)n Simple_repeat Simple_repeat 5 48 0 1617 184 7 7 chr2 161674916 161675215 -89012639 - AluJo SINE Alu -11 301 3 1957 154 42 14 chr2 161675373 161675801 -89012053 + LTR7 LTR ERV1 3 442 -8 2988 193 58 9 chr2 161675808 161676503 -89011351 - L1MB7 LINE L1 -19 6165 5437 * 6621 216 26 28 chr2 161676501 161676624 -89011230 - L1MB7 LINE L1 -996 5150 5028 2236 103 0 0 chr2 161676624 161676916 -89010938 + AluSg SINE Alu 1 292 -18 6621 216 26 28 chr2 161676916 161677620 -89010234 - L1MB7 LINE L1 -1118 5028 4324 3506 143 18 12 chr2 161677620 161678221 -89009633 - MER6A DNA MER2_type 0 605 1 6621 216 26 28 chr2 161678221 161679326 -89008528 - L1MB7 LINE L1 -1822 4324 3220 779 168 15 0 chr2 161679326 161679463 -89008391 + L1MB3 LINE L1 5899 6037 -146 1179 107 73 0 chr2 161679471 161679591 -89008263 - L1MA9 LINE L1 -25 6287 6177 408 104 0 0 chr2 161679591 161679658 -89008196 + (TG)n Simple_repeat Simple_repeat 1 67 0 1179 107 73 0 chr2 161679658 161679743 -89008111 - L1MA9 LINE L1 -135 6177 6067 4723 84 14 5 chr2 161679990 161680643 -89007211 - L1PA11 LINE L1 -1 6173 5515 1609 103 0 0 chr2 161680646 161680849 -89007005 - AluSx SINE Alu -105 207 5 1265 169 14 53 chr2 161680852 161681136 -89006718 - L1PA11 LINE L1 -814 5332 5060 8707 158 31 2 chr2 161681147 161682804 -89005050 + L1P LINE L1 2047 3750 -2396 835 148 0 7 chr2 161682804 161682952 -89004902 + L1MB3 LINE L1 6029 6176 -7 241 118 0 0 chr2 161682955 161682989 -89004865 - U2 snRNA snRNA -153 35 2 2203 107 0 23 chr2 161682989 161683299 -89004555 - AluSx SINE Alu -9 303 1 388 328 132 41 chr2 161683348 161683693 -89004161 - L2 LINE L2 -692 2622 2235 1700 150 126 3 chr2 161683693 161684019 -89003835 - MER47A DNA MER2_type 0 366 1 388 328 132 41 chr2 161684019 161684066 -89003788 - L2 LINE L2 -1079 2235 2194 201 129 0 0 chr2 161684238 161684269 -89003585 + (CAA)n Simple_repeat Simple_repeat 3 33 0 2245 111 0 0 chr2 161684303 161684591 -89003263 - AluSc SINE Alu -21 288 1 2377 220 52 22 chr2 161685001 161685772 -89002082 - L1ME1 LINE L1 -9 6224 5411 405 216 40 40 chr2 161685778 161685954 -89001900 - L1ME1 LINE L1 -860 5355 5180 * 1356 237 32 63 chr2 161685941 161686498 -89001356 - L1ME1 LINE L1 -1841 4374 3835 1926 287 39 22 chr2 161686532 161687480 -89000374 - L1ME1 LINE L1 -5292 965 40 1780 153 25 0 chr2 161687577 161687875 -88999979 + AluJo SINE Alu 1 305 0 204 339 0 16 chr2 161688138 161688200 -88999654 - MER91 DNA MER1_type -79 61 1 1028 214 148 36 chr2 161688225 161688637 -88999217 - MLT1L LTR MaLR -31 584 127 2155 125 0 3 chr2 161689644 161689948 -88997906 - AluSx SINE Alu -9 303 1 6932 57 11 0 chr2 161690539 161692194 -88995660 + L1PA7 LINE L1 4470 6146 -8 305 284 81 55 chr2 161692288 161692443 -88995411 + L1M4 LINE L1 5512 5662 -516 2346 212 52 12 chr2 161692443 161692962 -88994892 - MLT1F LTR MaLR -2 540 1 305 284 81 55 chr2 161692962 161693116 -88994738 + L1M4 LINE L1 5662 5829 -349 2580 52 7 0 chr2 161693585 161693893 -88993961 + AluY SINE Alu 1 310 -1 1818 136 30 4 chr2 161693912 161694210 -88993644 + AluSx SINE Alu 12 316 0 207 262 95 60 chr2 161695670 161695754 -88992100 + L2 LINE L2 3146 3232 -40 5009 85 40 3 chr2 161698476 161699209 -88988645 + L1MA2 LINE L1 5545 6304 0 1215 174 75 12 chr2 161699429 161699693 -88988161 - L1MB5 LINE L1 -8 6166 5881 1957 138 28 0 chr2 161700161 161700451 -88987403 - AluSx SINE Alu -14 298 1 2340 84 13 3 chr2 161700687 161700997 -88986857 + AluSq SINE Alu 1 313 0 360 0 0 0 chr2 161701791 161701831 -88986023 + (CA)n Simple_repeat Simple_repeat 2 41 0 314 324 9 19 chr2 161701834 161701939 -88985915 + L2 LINE L2 3164 3267 -5 505 0 15 15 chr2 161702174 161702240 -88985614 + (TA)n Simple_repeat Simple_repeat 1 66 0 2046 138 0 0 chr2 161702241 161702523 -88985331 - AluSx SINE Alu -30 282 1 2208 108 0 7 chr2 161704093 161704390 -88983464 - AluSx SINE Alu -17 295 1 187 394 0 39 chr2 161704423 161704603 -88983251 + L2 LINE L2 1166 1338 -1976 767 161 23 15 chr2 161704617 161704747 -88983107 + AluJ SINE Alu 1 131 -171 505 157 0 22 chr2 161704756 161704845 -88983009 + AluJ SINE Alu 209 295 -17 345 318 75 68 chr2 161705001 161705305 -88982549 + L2 LINE L2 1529 1838 -1476 2177 109 3 67 chr2 161705305 161705636 -88982218 - AluSx SINE Alu -2 310 1 345 318 75 68 chr2 161705636 161705784 -88982070 + L2 LINE L2 1838 1984 -1330 1687 167 0 18 chr2 161705795 161706077 -88981777 - AluJo SINE Alu -24 288 12 2380 69 0 10 chr2 161707109 161707412 -88980442 + AluSx SINE Alu 1 300 -12 188 328 31 0 chr2 161708570 161708634 -88979220 + L2 LINE L2 2159 2224 -1090 596 312 112 37 chr2 161708725 161709184 -88978670 + L2 LINE L2 2733 3290 -23 1027 142 89 0 chr2 161710100 161710290 -88977564 - MER3 DNA MER1_type 0 209 3 287 93 0 0 chr2 161710793 161710836 -88977018 - MADE1 DNA Mariner -37 43 1 340 166 112 53 chr2 161711723 161711849 -88976005 - MIR SINE MIR -59 149 16 32 26 0 0 chr2 161712507 161712546 -88975308 + AT_rich Low_complexity Low_complexity 1 39 0 2145 133 0 0 chr2 161712546 161712854 -88975000 - AluSx SINE Alu -4 308 1 382 268 117 46 chr2 161712888 161712919 -88974935 - L1ME4a LINE L1 -267 5854 5827 2238 74 0 4 chr2 161712919 161713190 -88974664 - AluSc SINE Alu -21 288 19 382 268 117 46 chr2 161713190 161713397 -88974457 - L1ME4a LINE L1 -294 5827 5599 21 0 0 0 chr2 161713869 161713890 -88973964 + AT_rich Low_complexity Low_complexity 1 21 0 880 127 0 8 chr2 161713926 161714052 -88973802 - AluSq/x SINE Alu -187 125 1 3600 148 65 25 chr2 161715232 161715290 -88972564 - L1MB3 LINE L1 0 6183 6129 1857 187 0 7 chr2 161715290 161715590 -88972264 - AluJo SINE Alu -14 298 1 3600 148 65 25 chr2 161715590 161716209 -88971645 - L1MB3 LINE L1 -54 6129 5479 1462 219 67 5 chr2 161716251 161716640 -88971214 - MLT1C LTR MaLR 0 467 55 387 177 0 25 chr2 161717165 161717244 -88970610 + MER103 DNA DNA 9 85 -81 1743 177 6 22 chr2 161717244 161717555 -88970299 + AluJo SINE Alu 1 306 -6 386 19 57 0 chr2 161717558 161717611 -88970243 + (GAAAA)n Simple_repeat Simple_repeat 4 59 0 2425 59 0 3 chr2 161717875 161718178 -88969676 - AluY SINE Alu -9 302 1 244 285 163 49 chr2 161719272 161719395 -88968459 - MIR SINE MIR -106 156 20 822 140 5 83 chr2 161720314 161720507 -88967347 + L1MC3 LINE L1 6835 7012 -773 293 89 10 198 chr2 161720607 161720643 -88967211 + L1MC3 LINE L1 7013 7022 -763 2221 81 0 3 chr2 161720643 161720958 -88966896 + AluSx SINE Alu 1 314 0 293 89 10 198 chr2 161720958 161721020 -88966834 + L1MC3 LINE L1 7022 7094 -691 258 319 0 11 chr2 161721021 161721115 -88966739 + MLT1F1 LTR MaLR 33 125 -442 2752 173 65 7 chr2 161721115 161721671 -88966183 + L1MC3 LINE L1 7190 7777 -8 23 68 0 0 chr2 161722106 161722150 -88965704 + AT_rich Low_complexity Low_complexity 1 44 0 3652 63 10 16 chr2 161723073 161723567 -88964287 + L1PB1 LINE L1 5661 6151 0 2083 120 0 3 chr2 161723723 161724015 -88963839 - AluSg1 SINE Alu -18 291 1 956 174 122 70 chr2 161724016 161724211 -88963643 + L1MB8 LINE L1 4847 5061 -1085 2057 137 3 9 chr2 161724211 161724526 -88963328 + AluSq SINE Alu 1 313 0 956 174 122 70 chr2 161724526 161724600 -88963254 + L1MB8 LINE L1 5061 5130 -1016 32811 105 10 45 chr2 161724622 161730994 -88956860 + L1PA7 LINE L1 12 6154 0 58 28 0 0 chr2 161731066 161731138 -88956716 + AT_rich Low_complexity Low_complexity 1 72 0 3597 172 57 36 chr2 161731149 161731928 -88955926 + L1MB8 LINE L1 5255 6049 -129 2130 112 26 10 chr2 161733453 161733757 -88954097 - AluSx SINE Alu -3 309 1 1813 129 187 8 chr2 161733971 161734334 -88953520 + MSTA LTR MaLR 1 428 0 1638 126 113 74 chr2 161735041 161735367 -88952487 + MER1B DNA MER1_type 1 339 0 1452 202 49 3 chr2 161736005 161736292 -88951562 - AluJo SINE Alu -12 300 1 2593 95 17 3 chr2 161736552 161736911 -88950943 + THE1B LTR MaLR 1 364 0 22 35 0 0 chr2 161738164 161738193 -88949661 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr2 161738604 161738630 -88949224 + AT_rich Low_complexity Low_complexity 1 26 0 846 268 57 0 chr2 161738631 161738859 -88948995 - MIR SINE MIR -11 251 11 339 291 160 34 chr2 161738960 161739166 -88948688 + MIR SINE MIR 7 238 -24 3564 146 11 3 chr2 161739890 161740458 -88947396 + L1PA16 LINE L1 5519 6090 -76 182 384 52 35 chr2 161740601 161740773 -88947081 + L2 LINE L2 354 528 -2786 254 317 89 40 chr2 161740964 161741188 -88946666 + L2 LINE L2 2539 2773 -541 306 239 94 36 chr2 161741391 161741529 -88946325 + L1ME4a LINE L1 5944 6089 -32 26 0 0 0 chr2 161741730 161741756 -88946098 + AT_rich Low_complexity Low_complexity 1 26 0 2214 119 0 0 chr2 161741756 161742050 -88945804 - AluSx SINE Alu -18 294 1 597 180 47 39 chr2 161742523 161742651 -88945203 - FLAM_A SINE Alu -4 129 1 2212 129 0 0 chr2 161742678 161742987 -88944867 + AluSx SINE Alu 1 309 -3 1764 189 0 3 chr2 161743244 161743535 -88944319 + AluJb SINE Alu 2 291 -21 23 68 0 0 chr2 161744497 161744541 -88943313 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr2 161744836 161744859 -88942995 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 161744954 161744993 -88942861 + AT_rich Low_complexity Low_complexity 1 39 0 614 128 288 0 chr2 161744993 161745118 -88942736 - L1PA16 LINE L1 -6 6160 6000 318 351 0 9 chr2 161746289 161746403 -88941451 + L1ME4a LINE L1 3347 3459 -2687 710 271 76 17 chr2 161746434 161746670 -88941184 - MIR SINE MIR 0 262 13 941 187 0 5 chr2 161746708 161746906 -88940948 + L1MA6 LINE L1 6102 6298 -2 22 0 0 0 chr2 161746908 161746930 -88940924 + AT_rich Low_complexity Low_complexity 1 22 0 254 305 81 43 chr2 161747020 161747390 -88940464 + L1ME4a LINE L1 3595 3978 -2168 284 127 14 42 chr2 161747752 161747823 -88940031 - L1PA16 LINE L1 0 6166 6098 883 150 11 0 chr2 161747824 161748033 -88939821 - L1PA15 LINE L1 -105 6061 5808 247 196 98 20 chr2 161748070 161748172 -88939682 + L1ME4a LINE L1 4459 4568 -1578 1106 100 72 0 chr2 161748430 161748610 -88939244 - MER2 DNA MER2_type 0 345 153 567 109 0 76 chr2 161748735 161748827 -88939027 - FLAM_C SINE Alu -28 115 31 1600 187 31 7 chr2 161748995 161749289 -88938565 + AluJo SINE Alu 1 301 -11 2090 127 0 16 chr2 161749750 161750066 -88937788 - AluSx SINE Alu -1 311 1 779 196 0 7 chr2 161750093 161750246 -88937608 - FRAM SINE Alu -21 155 4 456 319 118 0 chr2 161750248 161750452 -88937402 + MIR SINE MIR 33 260 -2 720 265 112 3 chr2 161750458 161750745 -88937109 + L1ME4a LINE L1 5494 5811 -310 487 125 0 0 chr2 161750739 161750811 -88937043 + L1PB1 LINE L1 5704 5775 -376 * 230 111 44 0 chr2 161750814 161750859 -88936995 + LTR66 LTR ERVL 392 438 -172 214 191 16 16 chr2 161750879 161750942 -88936912 + (TATG)n Simple_repeat Simple_repeat 2 64 0 2563 84 3 16 chr2 161750942 161751310 -88936544 + L1PB1 LINE L1 5781 6143 -8 277 244 51 0 chr2 161751328 161751406 -88936448 + L1ME4a LINE L1 5838 5919 -202 261 241 111 19 chr2 161751495 161751603 -88936251 - MER112 DNA MER1_type -25 235 118 595 190 44 25 chr2 161751625 161751783 -88936071 - MER112 DNA MER1_type -91 169 9 1269 172 37 11 chr2 161752383 161752656 -88935198 - L1MB8 LINE L1 -6 6172 5893 587 170 0 20 chr2 161753388 161753488 -88934366 - FRAM SINE Alu -24 152 55 310 82 82 0 chr2 161753525 161753623 -88934231 + (TA)n Simple_repeat Simple_repeat 2 107 0 422 280 259 16 chr2 161753635 161753828 -88934026 - MIR SINE MIR -12 250 11 330 262 103 32 chr2 161754225 161754351 -88933503 + MLT1J LTR MaLR 311 445 -66 2169 128 0 3 chr2 161755164 161755470 -88932384 - AluSx SINE Alu -7 305 1 33 80 0 0 chr2 161757035 161757110 -88930744 + AT_rich Low_complexity Low_complexity 1 75 0 1495 78 0 5 chr2 161807272 161807463 -88880391 + AluY SINE Alu 116 305 -6 699 209 90 0 chr2 161807463 161807674 -88880180 + Charlie2 DNA MER1_type 2425 2654 -208 3032 190 92 4 chr2 161807674 161807942 -88879912 + L1MC4a LINE L1 6716 6959 -849 195 42 0 0 chr2 161807942 161807966 -88879888 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 3032 190 92 4 chr2 161807966 161808418 -88879436 + L1MC4a LINE L1 6959 7499 -309 536 217 159 0 chr2 161808723 161808880 -88878974 - MIR SINE MIR -19 243 62 222 218 64 13 chr2 161809241 161809319 -88878535 - MIR SINE MIR -59 149 68 255 306 46 28 chr2 161810525 161810633 -88877221 + MIR SINE MIR 85 194 -68 237 132 0 0 chr2 161811338 161811376 -88876478 + (CTG)n Simple_repeat Simple_repeat 1 38 0 23 33 0 0 chr2 161811678 161811708 -88876146 + GC_rich Low_complexity Low_complexity 1 30 0 2106 112 0 3 chr2 161811944 161812249 -88875605 - AluJb SINE Alu -8 304 1 197 133 0 0 chr2 161812354 161812384 -88875470 - L2 LINE L2 -8 3305 3276 276 333 12 0 chr2 161813345 161813429 -88874425 - MIR3 SINE MIR -5 203 119 2870 76 0 0 chr2 161813744 161814099 -88873755 + THE1A LTR MaLR 1 355 0 790 244 17 0 chr2 161814124 161814296 -88873558 + MIR SINE MIR 1 175 -87 3593 120 15 19 chr2 161814442 161814967 -88872887 + MER1A DNA MER1_type 1 523 -4 819 245 166 25 chr2 161815555 161815869 -88871985 - LTR16C LTR ERVL 0 491 134 287 280 201 28 chr2 161816083 161816297 -88871557 - L2 LINE L2 -150 3122 2872 350 337 40 40 chr2 161817168 161817370 -88870484 - L2 LINE L2 -2397 917 716 614 239 67 50 chr2 161817395 161817633 -88870221 + MER112 DNA MER1_type 14 255 -5 303 211 239 49 chr2 161817947 161818089 -88869765 - MIR SINE MIR -54 208 40 25 0 0 0 chr2 161819350 161819375 -88868479 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr2 161819426 161819459 -88868395 + AT_rich Low_complexity Low_complexity 1 33 0 847 138 8 0 chr2 161819460 161819583 -88868271 - FLAM_C SINE Alu -19 124 1 196 256 0 0 chr2 161819586 161819629 -88868225 - MIR SINE MIR -104 158 116 943 231 26 41 chr2 161819726 161819995 -88867859 + MER45C DNA AcHobo 1 265 -688 1177 157 10 102 chr2 161820275 161820580 -88867274 + MLT1B LTR MaLR 114 390 0 237 33 0 0 chr2 161820609 161820639 -88867215 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 220 277 15 46 chr2 161823114 161823179 -88864675 + MIR3 SINE MIR 138 200 -8 1549 111 33 0 chr2 161823432 161823675 -88864179 - L1PA10 LINE L1 0 6168 5918 1583 124 154 0 chr2 161823715 161823974 -88863880 - AluSg SINE Alu -1 299 1 279 315 0 0 chr2 161824118 161824191 -88863663 + L2 LINE L2 3200 3272 0 2735 10 0 3 chr2 161824419 161824721 -88863133 + AluYa5 SINE Alu 1 301 -10 196 321 91 43 chr2 161826204 161826391 -88861463 + MIR SINE MIR 35 230 -32 32 0 0 0 chr2 161827422 161827454 -88860400 + AT_rich Low_complexity Low_complexity 1 32 0 1978 140 7 0 chr2 161828103 161828389 -88859465 + AluSx SINE Alu 1 288 -24 294 273 141 16 chr2 161829462 161829590 -88858264 - MLT1J LTR MaLR -144 367 224 523 276 125 39 chr2 161830283 161830515 -88857339 + MIR SINE MIR 5 256 -6 251 91 0 23 chr2 161830519 161830563 -88857291 + (CACCAT)n Simple_repeat Simple_repeat 1 43 0 255 302 24 56 chr2 161830616 161830742 -88857112 + L2 LINE L2 3095 3216 -56 1761 163 37 0 chr2 161832109 161832379 -88855475 + AluJb SINE Alu 1 280 -32 1759 182 14 3 chr2 161832969 161833265 -88854589 + AluJb SINE Alu 1 299 -13 1819 163 0 23 chr2 161833311 161833611 -88854243 - AluJo SINE Alu -19 293 1 270 234 0 0 chr2 161833996 161834060 -88853794 - L1M4 LINE L1 -2198 3948 3885 231 241 18 107 chr2 161834099 161834211 -88853643 - MER102b DNA MER1_type -32 309 208 46 0 0 0 chr2 161834247 161834293 -88853561 + AT_rich Low_complexity Low_complexity 1 46 0 737 102 0 0 chr2 161834486 161834584 -88853270 + AluS SINE Alu 1 98 -215 212 255 0 0 chr2 161834595 161834642 -88853212 + (TATG)n Simple_repeat Simple_repeat 2 48 0 322 122 0 56 chr2 161835914 161836004 -88851850 + (GAA)n Simple_repeat Simple_repeat 2 86 0 493 212 32 3 chr2 161836492 161837118 -88850736 + (TA)n Simple_repeat Simple_repeat 1 643 0 310 207 30 0 chr2 161837130 161837294 -88850560 + (TA)n Simple_repeat Simple_repeat 2 170 0 898 229 81 0 chr2 161837441 161837699 -88850155 - Charlie2a DNA MER1_type -1117 1745 1467 1330 252 120 22 chr2 161837788 161838288 -88849566 - Charlie2a DNA MER1_type -2261 601 53 585 142 35 0 chr2 161838550 161838719 -88849135 + (TA)n Simple_repeat Simple_repeat 2 176 0 547 244 138 12 chr2 161839521 161839681 -88848173 - MIR SINE MIR -75 187 8 333 285 171 8 chr2 161839868 161839991 -88847863 - MIR SINE MIR -82 180 38 2476 82 0 9 chr2 161840406 161840722 -88847132 + AluSq SINE Alu 1 313 0 275 306 218 7 chr2 161841058 161841205 -88846649 + MIR3 SINE MIR 27 204 -4 2201 127 3 0 chr2 161841270 161841578 -88846276 + AluSx SINE Alu 1 309 -3 1107 199 5 5 chr2 161843407 161843618 -88844236 + AluJb SINE Alu 85 295 -17 5459 128 34 17 chr2 161843825 161844830 -88843024 - L1MA8 LINE L1 -3 6288 5267 1115 153 153 30 chr2 161845010 161845272 -88842582 + MER7A DNA MER2_type 55 346 0 3696 133 2 5 chr2 161845272 161845902 -88841952 - L1MA8 LINE L1 -878 5268 4641 188 314 0 29 chr2 161846624 161846694 -88841160 - L2 LINE L2 -32 3240 3173 195 272 173 25 chr2 161849324 161849405 -88838449 - L2 LINE L2 -6 3266 3174 375 261 102 0 chr2 161849537 161849694 -88838160 + L1ME4a LINE L1 5943 6115 -6 2644 58 0 0 chr2 161850086 161850429 -88837425 + L1PA6 LINE L1 5782 6124 -30 1872 151 0 24 chr2 161850646 161850938 -88836916 + AluJb SINE Alu 1 285 -27 394 260 162 12 chr2 161851471 161851644 -88836210 - MIR SINE MIR -52 210 12 375 78 0 0 chr2 161854698 161854749 -88833105 + (TCCA)n Simple_repeat Simple_repeat 2 52 0 237 296 0 0 chr2 161854793 161854864 -88832990 - L2 LINE L2 -43 3229 3159 589 249 114 102 chr2 161855440 161855930 -88831924 + L2 LINE L2 2602 3112 -201 381 43 0 0 chr2 161855930 161855977 -88831877 + (CA)n Simple_repeat Simple_repeat 1 47 0 589 249 114 102 chr2 161855977 161856182 -88831672 + L2 LINE L2 3112 3313 0 536 329 46 42 chr2 161857652 161857892 -88829962 + MIR SINE MIR 3 243 -19 192 125 0 0 chr2 161857912 161857944 -88829910 + (CAG)n Simple_repeat Simple_repeat 1 32 0 315 294 73 29 chr2 161858144 161858280 -88829574 - MER5A DNA MER1_type -22 167 26 2121 112 7 0 chr2 161859604 161859882 -88827972 + AluSx SINE Alu 1 280 -32 434 304 67 52 chr2 161859914 161860302 -88827552 + L2 LINE L2 1185 1578 -1736 823 228 18 0 chr2 161860314 161860481 -88827373 + MER5A DNA MER1_type 1 170 -19 274 338 25 31 chr2 161860490 161860650 -88827204 + L2 LINE L2 1640 1798 -1516 660 277 134 36 chr2 161860732 161861061 -88826793 - L2 LINE L2 0 3313 2953 529 237 12 41 chr2 161861081 161861250 -88826604 + MER97a DNA MER1_type? 12 175 -719 677 331 76 24 chr2 161861348 161861717 -88826137 - L2 LINE L2 -420 2894 2507 1359 197 46 43 chr2 161861719 161862090 -88825764 - MER76 LTR ERV 0 688 317 1515 117 133 15 chr2 161862432 161862696 -88825158 - MER1B DNA MER1_type -9 330 36 793 224 56 0 chr2 161863571 161863767 -88824087 - MER3 DNA MER1_type -2 207 1 1486 16 0 33 chr2 161864859 161865043 -88822811 + L1PA2 LINE L1 5977 6154 -1 2067 121 75 29 chr2 161865698 161866046 -88821808 + THE1B LTR MaLR 1 364 0 1034 172 32 16 chr2 161866419 161866605 -88821249 - MER5A DNA MER1_type 0 189 1 23 0 0 0 chr2 161867355 161867378 -88820476 + AT_rich Low_complexity Low_complexity 1 23 0 294 266 51 13 chr2 161868701 161868780 -88819074 - L2 LINE L2 -52 3261 3180 210 26 77 0 chr2 161868858 161868897 -88818957 + (TA)n Simple_repeat Simple_repeat 2 43 0 351 0 0 0 chr2 161868963 161869002 -88818852 + (CA)n Simple_repeat Simple_repeat 1 39 0 1996 105 0 15 chr2 161869076 161869343 -88818511 + AluSx SINE Alu 50 312 0 980 192 6 0 chr2 161869984 161870140 -88817714 + FAM SINE Alu 1 157 -18 292 313 165 16 chr2 161870175 161870357 -88817497 + MIR SINE MIR 53 261 -1 756 249 21 10 chr2 161870541 161870734 -88817120 + MIR SINE MIR 37 231 -31 27 29 0 0 chr2 161870813 161870847 -88817007 + AT_rich Low_complexity Low_complexity 1 34 0 603 231 45 32 chr2 161870857 161870979 -88816875 + L1M4 LINE L1 4432 4560 -1586 1605 180 27 23 chr2 161870979 161871279 -88816575 - AluJo SINE Alu -11 301 1 603 231 45 32 chr2 161871279 161871377 -88816477 + L1M4 LINE L1 4560 4655 -1491 25 83 0 0 chr2 161871392 161871452 -88816402 + AT_rich Low_complexity Low_complexity 1 60 0 277 228 30 40 chr2 161872646 161872747 -88815107 + (TATATG)n Simple_repeat Simple_repeat 3 102 0 357 185 49 12 chr2 161872963 161873044 -88814810 - MIR3 SINE MIR -25 183 100 260 259 35 12 chr2 161873533 161873618 -88814236 + MIR3 SINE MIR 84 170 -38 768 211 84 6 chr2 161873790 161873956 -88813898 + MER5A DNA MER1_type 3 181 -8 1045 264 19 8 chr2 161874070 161874328 -88813526 + MIR SINE MIR 2 262 0 2228 157 90 55 chr2 161874766 161875257 -88812597 + LTR54 LTR ERV1 3 510 0 197 349 58 0 chr2 161875298 161875384 -88812470 + L2 LINE L2 1818 1908 -1406 359 292 56 28 chr2 161875938 161876082 -88811772 + MIR SINE MIR 1 148 -114 192 355 108 0 chr2 161878209 161878302 -88809552 + MIR SINE MIR 35 137 -71 614 227 15 0 chr2 161878770 161878902 -88808952 - Charlie4 DNA MER1_type -4 1957 1824 774 115 0 0 chr2 161879674 161879778 -88808076 - MER76 LTR ERV -584 104 1 689 305 154 27 chr2 161879859 161880308 -88807546 - L2 LINE L2 -925 2389 1884 251 122 0 0 chr2 161880349 161880390 -88807464 + L1M4 LINE L1 3600 3640 -2506 509 271 65 7 chr2 161880668 161880823 -88807031 - LTR16A LTR ERVL -181 269 106 1768 127 81 0 chr2 161880969 161881253 -88806601 - MER46B DNA MER2_type 0 236 55 1238 181 9 14 chr2 161881273 161881494 -88806360 - AluJo SINE Alu -92 220 1 604 178 68 20 chr2 161881977 161882123 -88805731 + MER103 DNA DNA 3 155 -11 273 206 41 52 chr2 161883898 161883995 -88803859 - L1ME4a LINE L1 -20 6101 6006 1986 149 0 16 chr2 161884078 161884393 -88803461 + AluSx SINE Alu 1 310 -2 759 250 83 13 chr2 161884454 161884682 -88803172 + MIR SINE MIR 16 259 -3 336 297 0 0 chr2 161884690 161884801 -88803053 - L1ME4a LINE L1 -211 5910 5800 353 284 82 15 chr2 161884881 161885015 -88802839 - L1ME4a LINE L1 -424 5697 5555 572 282 0 0 chr2 161886042 161886173 -88801681 + MER94 DNA DNA 3 133 -1 21 71 0 0 chr2 161888262 161888304 -88799550 + AT_rich Low_complexity Low_complexity 1 42 0 365 242 17 33 chr2 161888777 161888897 -88798957 + CT-rich Low_complexity Low_complexity 2 119 0 2113 81 18 0 chr2 161889019 161889292 -88798562 - AluSq SINE Alu -35 278 1 905 249 28 21 chr2 161889989 161890274 -88797580 - L1MA9 LINE L1 -30 6282 5996 1144 223 57 97 chr2 161890274 161890760 -88797094 - L1M1 LINE L1 -3925 3640 3136 231 36 0 0 chr2 161890760 161890788 -88797066 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 762 199 81 0 chr2 161890790 161890926 -88796928 - FRAM SINE Alu -16 150 4 1144 223 57 97 chr2 161890926 161891032 -88796822 - L1M1 LINE L1 -4430 3135 3069 4955 228 26 68 chr2 161891032 161892398 -88795456 - L1M1 LINE L1 -5822 1744 437 3839 127 83 5 chr2 161892398 161892987 -88794867 - MER41B LTR ERV1 0 635 1 4955 228 26 68 chr2 161892987 161893023 -88794831 - L1M1 LINE L1 -7129 437 401 3999 125 35 25 chr2 161894372 161895019 -88792835 - L1PB4 LINE L1 -13 6143 5490 3043 107 41 2 chr2 161895293 161895705 -88792149 - MSTC LTR MaLR 0 428 1 693 284 213 35 chr2 161896093 161896847 -88791007 - L2 LINE L2 -49 3264 2362 937 220 22 0 chr2 161898568 161898750 -88789104 + MER5A DNA MER1_type 1 186 -3 265 310 203 5 chr2 161898799 161898986 -88788868 + MIR SINE MIR 37 260 -2 252 43 43 21 chr2 161899408 161899455 -88788399 + (TC)n Simple_repeat Simple_repeat 1 48 0 2285 120 3 0 chr2 161899653 161899962 -88787892 - AluSx SINE Alu -2 310 1 1085 160 6 17 chr2 161901109 161901284 -88786570 - FAM SINE Alu -2 173 1 312 248 49 14 chr2 161901424 161901519 -88786335 + MIR SINE MIR 44 123 -85 537 270 225 0 chr2 161902232 161902410 -88785444 + MIR SINE MIR 2 219 -43 227 204 0 0 chr2 161903710 161903754 -88784100 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2315 103 0 0 chr2 161903852 161904144 -88783710 - AluSx SINE Alu -20 292 1 30 0 0 0 chr2 161907791 161907821 -88780033 + GC_rich Low_complexity Low_complexity 1 30 0 191 222 133 22 chr2 161908735 161908825 -88779029 - L2 LINE L2 -5 3308 3209 1767 166 83 30 chr2 161908852 161909382 -88778472 + MLT2A2 LTR ERVL 1 554 0 370 303 37 0 chr2 161909796 161909905 -88777949 + L2 LINE L2 3201 3313 0 278 313 144 25 chr2 161909916 161910076 -88777778 + L2 LINE L2 2571 2749 -565 234 134 10 175 chr2 161910135 161910232 -88777622 + Charlie4 DNA MER1_type 1865 1945 -16 2265 95 3 3 chr2 161910275 161910571 -88777283 - AluSp SINE Alu -17 296 1 539 313 59 47 chr2 161910938 161911194 -88776660 + L2 LINE L2 3005 3263 -50 402 274 51 26 chr2 161911429 161911546 -88776308 - MIR SINE MIR -35 227 108 21 0 0 0 chr2 161911705 161911726 -88776128 + AT_rich Low_complexity Low_complexity 1 21 0 1200 239 93 59 chr2 161911874 161912472 -88775382 - L1ME3A LINE L1 -220 5950 5329 859 219 101 110 chr2 161912472 161912998 -88774856 + LTR33A LTR ERVL 1 521 -2 579 341 81 20 chr2 161913583 161914274 -88773580 - L1ME3A LINE L1 -927 5219 4487 314 368 70 5 chr2 161914334 161914519 -88773335 - L2 LINE L2 -565 2749 2553 227 266 56 49 chr2 161914704 161914741 -88773113 + L2 LINE L2 2933 2968 -304 2231 81 41 0 chr2 161914741 161915036 -88772818 - AluSq SINE Alu -6 307 1 227 266 56 49 chr2 161915036 161915141 -88772713 + L2 LINE L2 2968 3076 -196 254 95 24 0 chr2 161915849 161915891 -88771963 + (TG)n Simple_repeat Simple_repeat 2 44 0 811 281 49 31 chr2 161916478 161916827 -88771027 - LTR16C LTR ERVL -65 426 72 499 255 67 20 chr2 161918197 161918346 -88769508 + MIR SINE MIR 107 262 0 221 333 101 78 chr2 161918759 161919017 -88768837 - L2 LINE L2 -485 2829 2566 214 328 214 25 chr2 161919907 161920379 -88767475 - L2 LINE L2 -723 2591 2031 245 196 98 33 chr2 161920432 161920524 -88767330 - Charlie7 DNA MER1_type -1 2611 2514 27 73 0 0 chr2 161920507 161920562 -88767292 + AT_rich Low_complexity Low_complexity 1 55 0 * 482 236 47 20 chr2 161920723 161920871 -88766983 + HsTC2 DNA Tc2 1723 1874 -24 312 146 0 0 chr2 161920863 161920911 -88766943 - Charlie7 DNA MER1_type -2520 92 45 * 2404 92 0 13 chr2 161920940 161921255 -88766599 + AluSx SINE Alu 1 311 -1 486 279 158 9 chr2 161921472 161921687 -88766167 - MIR SINE MIR -11 251 5 313 301 141 69 chr2 161921852 161922463 -88765391 - L2 LINE L2 -1611 1703 1049 272 341 67 22 chr2 161922700 161922835 -88765019 + MLT2E LTR ERVL 32 172 -456 489 269 62 43 chr2 161923190 161923398 -88764456 - LTR67 LTR ERVL -2 555 344 2255 99 0 7 chr2 161923414 161923708 -88764146 - AluSg SINE Alu -18 292 1 273 314 81 41 chr2 161923710 161923882 -88763972 - LTR67 LTR ERVL -377 180 2 204 97 0 0 chr2 161923896 161923927 -88763927 + (TG)n Simple_repeat Simple_repeat 2 32 0 1626 150 20 10 chr2 161924392 161924698 -88763156 + MER4B LTR ERV1 299 607 -3 280 143 0 0 chr2 161925329 161925371 -88762483 - 5S rRNA rRNA -79 42 1 216 97 0 0 chr2 161925520 161925551 -88762303 + (A)n Simple_repeat Simple_repeat 1 31 0 191 306 111 0 chr2 161925617 161925689 -88762165 + MIR SINE MIR 45 124 -84 463 270 184 6 chr2 161925791 161925965 -88761889 - MIR SINE MIR -46 216 12 471 62 0 0 chr2 161926004 161926016 -88761838 + (GA)n Simple_repeat Simple_repeat 2 13 -53 369 0 0 0 chr2 161926016 161926057 -88761797 + (CA)n Simple_repeat Simple_repeat 2 42 0 471 62 0 0 chr2 161926057 161926109 -88761745 + (GA)n Simple_repeat Simple_repeat 12 66 0 22 70 0 0 chr2 161926162 161926205 -88761649 + AT_rich Low_complexity Low_complexity 1 43 0 2319 110 3 0 chr2 161926828 161927138 -88760716 - AluSx SINE Alu -1 311 1 261 98 0 0 chr2 161927780 161927821 -88760033 + (CA)n Simple_repeat Simple_repeat 1 41 0 201 293 0 0 chr2 161928194 161928235 -88759619 - L2 LINE L2 -16 3256 3216 1931 164 0 7 chr2 161929631 161929935 -88757919 - AluJo SINE Alu -6 306 5 4800 170 30 31 chr2 161930032 161931426 -88756428 - L1MB3 LINE L1 -1 6182 4791 1868 164 0 13 chr2 161931426 161931738 -88756116 - AluJo SINE Alu -4 308 1 4800 170 30 31 chr2 161931738 161932166 -88755688 - L1MB3 LINE L1 -1392 4791 4364 1496 132 10 34 chr2 161932173 161932468 -88755386 - LTR1 LTR ERV1 -482 303 16 1773 147 72 0 chr2 161934272 161934589 -88753265 - AluJb SINE Alu 0 312 1 337 314 48 0 chr2 161935463 161935587 -88752267 - MER94 DNA DNA -4 130 1 304 297 63 26 chr2 161935674 161935999 -88751855 - L1ME4a LINE L1 -106 5998 5661 263 291 61 20 chr2 161936083 161936231 -88751623 - L1ME4a LINE L1 -594 5510 5357 305 301 134 33 chr2 161936362 161936638 -88751216 - L1ME4a LINE L1 -932 5197 4894 332 280 108 33 chr2 161936826 161937040 -88750814 - L1ME4a LINE L1 -2171 3958 3729 489 242 0 10 chr2 161937100 161937199 -88750655 - MER5A DNA MER1_type -83 106 9 1071 305 49 25 chr2 161937450 161938322 -88749532 - L1ME4a LINE L1 -3144 2985 2093 428 259 91 62 chr2 161938752 161939169 -88748685 - L1ME4a LINE L1 -4915 1204 776 557 321 64 57 chr2 161939235 161939880 -88747974 - L1ME4a LINE L1 -5446 673 25 1401 158 143 60 chr2 161940170 161940505 -88747349 - MLT1A1 LTR MaLR -2 363 1 245 324 112 41 chr2 161940730 161940900 -88746954 - L2 LINE L2 -421 2893 2712 662 258 154 34 chr2 161940960 161941193 -88746661 + MIR SINE MIR 2 262 0 8116 141 61 37 chr2 161941529 161943425 -88744429 + L1MCa LINE L1 18 2054 -4372 205 29 59 0 chr2 161943425 161943459 -88744395 + (TAGA)n Simple_repeat Simple_repeat 2 37 0 8116 141 61 37 chr2 161943459 161943513 -88744341 + L1MCa LINE L1 2054 2105 -4321 679 163 75 12 chr2 161943510 161943670 -88744184 + L1MC1 LINE L1 6141 6310 -23 * 304 167 36 0 chr2 161944477 161944561 -88743293 - L1MC1 LINE L1 -106 6227 6141 2772 219 69 69 chr2 161944719 161945959 -88741895 - L1MC5 LINE L1 -104 7857 6601 252 0 0 0 chr2 161945959 161945987 -88741867 + (TG)n Simple_repeat Simple_repeat 2 29 0 2772 219 69 69 chr2 161945987 161946052 -88741802 - L1MC5 LINE L1 -1360 6601 6538 3892 30 0 0 chr2 161946665 161947158 -88740696 - L1P LINE L1 -1395 4751 4259 7190 22 0 1 chr2 161947158 161947976 -88739878 + L1PA3 LINE L1 5321 6153 -2 576 265 66 19 chr2 161948372 161948583 -88739271 + MIR SINE MIR 36 256 -6 499 261 68 17 chr2 161948577 161948753 -88739101 + MIR SINE MIR 48 232 -30 * 214 250 15 15 chr2 161948812 161948880 -88738974 + GA-rich Low_complexity Low_complexity 2 69 0 263 299 92 29 chr2 161949753 161949927 -88737927 - MIR SINE MIR -51 211 27 260 312 60 134 chr2 161950847 161951145 -88736709 + L2 LINE L2 2994 3269 -3 266 213 0 0 chr2 161952380 161952427 -88735427 + L2 LINE L2 3256 3302 -11 2221 125 0 0 chr2 161952551 161952862 -88734992 + AluSx SINE Alu 1 311 -1 1250 233 106 6 chr2 161953068 161953407 -88734447 - MER70A LTR ERVL -96 376 4 225 154 0 0 chr2 161953616 161953655 -88734199 + (TG)n Simple_repeat Simple_repeat 2 40 0 443 324 77 6 chr2 161953964 161954134 -88733720 - MIR3 SINE MIR -11 197 16 364 250 58 10 chr2 161954715 161954819 -88733035 + MIR SINE MIR 26 134 -128 187 231 0 58 chr2 161954808 161954860 -88732994 - L2 LINE L2 -1 3312 3264 * 195 265 44 0 chr2 161954895 161954963 -88732891 + MIR SINE MIR 128 198 -64 371 269 237 9 chr2 161955923 161956142 -88731712 - L3 LINE CR1 -77 1500 1232 255 217 133 0 chr2 161956627 161956710 -88731144 - MER103 DNA DNA -2 164 71 243 299 115 11 chr2 161956853 161956940 -88730914 + MER5A DNA MER1_type 64 159 -30 1083 183 191 12 chr2 161957244 161957490 -88730364 + AluJo SINE Alu 2 291 -11 1764 155 21 17 chr2 161957505 161957796 -88730058 + AluJb SINE Alu 1 292 -20 282 116 0 0 chr2 161957963 161958006 -88729848 + (CA)n Simple_repeat Simple_repeat 2 44 0 465 147 0 55 chr2 161959131 161959240 -88728614 - L1PA8 LINE L1 0 6172 6070 360 256 327 18 chr2 161960129 161960297 -88727557 - MIR SINE MIR -14 248 29 298 327 37 0 chr2 161960415 161960522 -88727332 - MIR3 SINE MIR -11 197 87 2111 100 43 20 chr2 161961253 161961554 -88726300 - AluY SINE Alu -3 308 1 197 0 0 67 chr2 161961554 161961584 -88726270 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 204 318 0 0 chr2 161962821 161962884 -88724970 + (TG)n Simple_repeat Simple_repeat 2 64 0 423 254 10 83 chr2 161963455 161963660 -88724194 - L2 LINE L2 -61 3252 3063 194 303 166 21 chr2 161963686 161963831 -88724023 + L3b LINE CR1 1249 1414 -169 238 363 88 0 chr2 161963858 161963949 -88723905 - L2 LINE L2 -5 3267 3169 272 131 16 0 chr2 161963962 161964023 -88723831 + L1MA8 LINE L1 6220 6281 -10 517 283 52 13 chr2 161964753 161964939 -88722915 - MIR SINE MIR -42 220 31 1691 169 69 31 chr2 161965491 161965841 -88722013 - MLT1A1 LTR MaLR 0 365 3 22 0 0 0 chr2 161966128 161966150 -88721704 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 161966283 161966304 -88721550 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 161966543 161966564 -88721290 + AT_rich Low_complexity Low_complexity 1 21 0 249 33 0 0 chr2 161967701 161967731 -88720123 + (TG)n Simple_repeat Simple_repeat 1 30 0 260 307 55 47 chr2 161967891 161968018 -88719836 - L3 LINE CR1 -548 1029 902 2797 39 0 0 chr2 161968094 161968425 -88719429 - L1PA7 LINE L1 -3 6151 5821 486 151 5 194 chr2 161969215 161969363 -88718491 - L1MA10 LINE L1 -89 6245 6155 2120 107 3 3 chr2 161969363 161969653 -88718201 + AluSx SINE Alu 1 290 -22 486 151 5 194 chr2 161969653 161969741 -88718113 - L1MA10 LINE L1 -179 6155 6052 318 271 0 0 chr2 161971956 161972063 -88715791 + (TG)n Simple_repeat Simple_repeat 2 108 0 295 361 54 25 chr2 161972598 161972642 -88715212 - MIR SINE MIR -11 251 210 2187 160 36 16 chr2 161972642 161973085 -88714769 - L1MB2 LINE L1 0 6171 5720 295 361 54 25 chr2 161973085 161973281 -88714573 - MIR SINE MIR -52 210 4 5655 96 28 28 chr2 161973319 161974171 -88713683 + L1MC1 LINE L1 5416 6270 -63 1815 128 16 0 chr2 161974171 161974422 -88713432 - AluSx SINE Alu -22 290 36 5655 96 28 28 chr2 161974422 161974484 -88713370 + L1MC1 LINE L1 6269 6330 -3 4270 178 33 20 chr2 161974807 161975984 -88711870 - L1MB4 LINE L1 -15 6165 4973 7043 52 3 0 chr2 161976167 161977279 -88710575 - L1PA7 LINE L1 -3 6151 5034 532 274 30 36 chr2 161977679 161977847 -88710007 - MER5B DNA MER1_type 0 178 12 196 294 0 0 chr2 161978407 161978458 -88709396 - MIR SINE MIR -136 126 76 318 289 22 11 chr2 161978770 161978860 -88708994 - L2 LINE L2 -48 3224 3134 783 338 106 26 chr2 161978984 161979590 -88708264 - L2 LINE L2 -344 2970 2317 291 271 24 12 chr2 161980224 161980309 -88707545 - L2 LINE L2 -534 2780 2695 843 193 25 35 chr2 161980318 161980520 -88707334 - MER20 DNA MER1_type -19 200 1 2393 143 44 12 chr2 161980735 161981148 -88706706 - MSTB LTR MaLR 0 426 1 2272 101 0 13 chr2 161981553 161981859 -88705995 + AluSc SINE Alu 1 302 -7 39 38 0 0 chr2 161983458 161983511 -88704343 + AT_rich Low_complexity Low_complexity 1 53 0 27 62 0 0 chr2 161983621 161983669 -88704185 + AT_rich Low_complexity Low_complexity 1 48 0 210 37 0 0 chr2 161984520 161984547 -88703307 + (TA)n Simple_repeat Simple_repeat 1 27 0 322 228 63 0 chr2 161984842 161984921 -88702933 - MIR SINE MIR -77 185 102 2003 107 7 4 chr2 161984928 161985208 -88702646 + AluSx SINE Alu 2 282 -30 216 0 0 0 chr2 161985212 161985236 -88702618 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 278 258 142 58 chr2 161985376 161985531 -88702323 + MIR SINE MIR 1 168 -94 360 355 65 5 chr2 161986279 161986479 -88701375 - MIR SINE MIR -3 259 48 21 36 0 0 chr2 161988196 161988224 -88699630 + AT_rich Low_complexity Low_complexity 1 28 0 804 251 149 54 chr2 161988325 161988822 -88699032 - L1MC4a LINE L1 -152 5969 5426 246 304 60 50 chr2 161989461 161989662 -88698192 - L2 LINE L2 0 3313 3111 189 107 0 0 chr2 161990389 161990417 -88697437 + (T)n Simple_repeat Simple_repeat 1 28 0 25 51 0 0 chr2 161990543 161990582 -88697272 + AT_rich Low_complexity Low_complexity 1 39 0 429 254 100 23 chr2 161990582 161990712 -88697142 - MIR SINE MIR -102 160 21 200 132 26 0 chr2 161990739 161990777 -88697077 + (TTATG)n Simple_repeat Simple_repeat 2 40 0 872 166 34 23 chr2 161992558 161992733 -88695121 - MER97a DNA MER1_type? -710 184 8 4549 19 2 2 chr2 161993070 161993597 -88694257 + L1PA3 LINE L1 5626 6152 -3 30 0 0 0 chr2 161993597 161993627 -88694227 + AT_rich Low_complexity Low_complexity 1 30 0 220 256 0 64 chr2 161995117 161995195 -88692659 - MIR SINE MIR -69 193 121 266 270 90 0 chr2 161995327 161995438 -88692416 + L1MA4 LINE L1 6178 6298 -2 2141 123 7 3 chr2 161995527 161995827 -88692027 + AluSx SINE Alu 1 301 -11 951 175 155 0 chr2 161996375 161996569 -88691285 - MER58A DNA MER1_type 0 224 1 968 172 0 0 chr2 161998241 161998392 -88689462 + FRAM SINE Alu 2 152 -24 2246 127 0 0 chr2 161999264 161999571 -88688283 - AluSc SINE Alu -2 307 1 497 196 78 0 chr2 161999637 161999739 -88688115 + L1PB4 LINE L1 6034 6143 -13 1050 180 87 0 chr2 162000399 162000605 -88687249 + MER58A DNA MER1_type 1 224 0 307 366 45 73 chr2 162000721 162000967 -88686887 - L2 LINE L2 -10 3262 3024 27 29 0 0 chr2 162001568 162001602 -88686252 + AT_rich Low_complexity Low_complexity 1 34 0 1039 139 104 12 chr2 162002690 162002863 -88684991 + AluJb SINE Alu 103 291 -21 1178 220 0 16 chr2 162002933 162003178 -88684676 - AluJo SINE Alu -71 241 1 2535 75 3 47 chr2 162003880 162004003 -88683851 - L1PB1 LINE L1 -8 6143 6016 2440 64 0 0 chr2 162004003 162004299 -88683555 - AluY SINE Alu -15 296 1 2535 75 3 47 chr2 162004299 162004559 -88683295 - L1PB1 LINE L1 -135 6016 5777 357 91 26 39 chr2 162004564 162004641 -88683213 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 241 83 62 0 chr2 162004777 162004825 -88683029 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 4427 147 9 4 chr2 162004825 162006218 -88681636 - L1PB1 LINE L1 -360 5791 4395 260 357 62 0 chr2 162006685 162006797 -88681057 - MIR SINE MIR -67 141 23 939 263 77 39 chr2 162007503 162007971 -88679883 + LTR33 LTR ERVL 36 521 0 306 258 54 11 chr2 162008832 162008925 -88678929 - MIR SINE MIR -110 152 56 26 0 0 0 chr2 162009830 162009856 -88677998 + AT_rich Low_complexity Low_complexity 1 26 0 370 228 11 0 chr2 162010120 162010212 -88677642 + LTR67 LTR ERVL 117 209 -348 1840 198 42 32 chr2 162010219 162010714 -88677140 + MLT1D LTR MaLR 6 505 0 292 323 32 0 chr2 162010715 162010808 -88677046 + LTR67 LTR ERVL 208 303 -254 295 299 47 0 chr2 162010906 162011013 -88676841 + LTR67 LTR ERVL 440 551 -6 381 242 216 39 chr2 162011384 162011537 -88676317 + MER5A DNA MER1_type 9 188 -1 205 339 209 26 chr2 162011548 162011663 -88676191 - L2 LINE L2 -220 3052 2917 319 233 47 39 chr2 162012384 162012513 -88675341 - LTR67 LTR ERVL 0 557 428 2373 66 0 17 chr2 162062817 162063119 -88624735 + AluY SINE Alu 1 297 -14 2154 107 3 0 chr2 162063418 162063707 -88624147 - AluSx SINE Alu -22 290 1 520 267 6 50 chr2 162063707 162063868 -88623986 + MIR SINE MIR 79 232 -30 243 61 0 0 chr2 162064191 162064224 -88623630 + (TC)n Simple_repeat Simple_repeat 2 34 0 207 0 0 0 chr2 162064536 162064559 -88623295 + (CAAAAA)n Simple_repeat Simple_repeat 4 26 0 211 191 0 0 chr2 162065489 162065531 -88622323 + C-rich Low_complexity Low_complexity 6 47 0 231 114 0 0 chr2 162066234 162066269 -88621585 + (T)n Simple_repeat Simple_repeat 1 35 0 180 97 0 0 chr2 162066293 162066324 -88621530 + (T)n Simple_repeat Simple_repeat 1 31 0 881 236 46 49 chr2 162067746 162068073 -88619781 - MER46C DNA MER2_type -9 329 4 211 344 141 8 chr2 162068483 162068611 -88619243 + L2 LINE L2 3128 3272 0 2177 120 0 13 chr2 162068726 162069026 -88618828 + AluSx SINE Alu 1 296 -16 196 349 0 16 chr2 162070321 162070384 -88617470 - L2 LINE L2 -6 3307 3246 373 287 70 21 chr2 162072488 162072631 -88615223 - MIR SINE MIR -112 150 1 829 228 103 61 chr2 162072805 162073213 -88614641 - MLT1C LTR MaLR -42 425 1 213 186 34 51 chr2 162073226 162073285 -88614569 + MIR SINE MIR 163 220 -42 1914 223 10 24 chr2 162074208 162074710 -88613144 + Charlie4a DNA MER1_type 13 507 -1 324 280 157 66 chr2 162075292 162075610 -88612244 + Tigger8 DNA MER2_type 68 414 -252 243 0 0 0 chr2 162076467 162076494 -88611360 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 489 158 0 11 chr2 162076645 162076740 -88611114 + (CCA)n Simple_repeat Simple_repeat 1 94 0 1366 187 0 32 chr2 162077246 162077497 -88610357 - AluJo SINE Alu -69 243 1 188 146 0 42 chr2 162080580 162080628 -88607226 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 196 186 23 0 chr2 162082967 162083010 -88604844 + MIR SINE MIR 110 153 -109 598 251 23 59 chr2 162084039 162084261 -88603593 - MIR SINE MIR 0 262 53 1022 135 0 31 chr2 162085420 162085583 -88602271 + FRAM SINE Alu 1 155 -21 576 199 147 13 chr2 162085685 162085841 -88602013 - MER3 DNA MER1_type 0 209 33 475 314 7 14 chr2 162087712 162087852 -88600002 + L2 LINE L2 3134 3272 0 4739 142 83 15 chr2 162089436 162090282 -88597572 + MER4D LTR ERV1 1 903 0 335 286 126 0 chr2 162090621 162090740 -88597114 - L2 LINE L2 0 3313 3180 339 299 243 6 chr2 162091413 162091738 -88596116 - L2 LINE L2 -925 2389 1988 188 280 0 20 chr2 162091878 162091928 -88595926 - L2 LINE L2 -16 3256 3208 289 275 12 12 chr2 162092054 162092134 -88595720 + MIR SINE MIR 180 259 -3 230 161 0 36 chr2 162092473 162092529 -88595325 + (TATG)n Simple_repeat Simple_repeat 1 54 0 317 217 72 12 chr2 162092529 162092553 -88595301 - L1MC4 LINE L1 -1340 6702 6681 1957 170 33 0 chr2 162092553 162092889 -88594965 - MER7A DNA MER2_type 0 346 2 317 217 72 12 chr2 162092889 162092947 -88594907 - L1MC4 LINE L1 -1361 6681 6615 279 197 0 16 chr2 162092968 162093029 -88594825 - MER47A DNA MER2_type -1 365 306 204 40 0 0 chr2 162093658 162093683 -88594171 + (CAA)n Simple_repeat Simple_repeat 3 27 0 269 250 0 0 chr2 162094126 162094182 -88593672 + L2 LINE L2 3248 3303 -10 341 246 0 0 chr2 162095520 162095589 -88592265 + L2 LINE L2 3244 3312 -1 24830 34 6 0 chr2 162095687 162099654 -88588200 + L1PA4 LINE L1 2171 6155 0 245 186 51 17 chr2 162099907 162099966 -88587888 - L2 LINE L2 -10 3303 3243 1455 226 79 25 chr2 162100647 162101129 -88586725 - HsTC2 DNA Tc2 -1381 517 10 366 79 16 0 chr2 162101443 162101506 -88586348 - L1MA2 LINE L1 0 6304 6241 306 286 150 0 chr2 162101562 162101695 -88586159 - L2 LINE L2 -2615 699 547 241 204 19 0 chr2 162108124 162108178 -88579676 + MIR SINE MIR 97 151 -111 2490 59 3 3 chr2 162108215 162108520 -88579334 - AluY SINE Alu -6 305 1 444 354 71 40 chr2 162108527 162108852 -88579002 - L2 LINE L2 -14 3258 2924 181 177 32 97 chr2 162111148 162111210 -88576644 + L2 LINE L2 522 579 -2735 264 179 103 51 chr2 162111674 162111752 -88576102 + MIR SINE MIR 69 150 -112 635 253 56 0 chr2 162111762 162111940 -88575914 + MER5A DNA MER1_type 2 189 0 2828 225 1 43 chr2 162112146 162112827 -88575027 - MER82 DNA MER2_type 0 653 1 427 264 201 22 chr2 162113738 162114066 -88573788 - L1MC/D LINE L1 -334 5787 5392 1979 115 18 7 chr2 162114235 162114521 -88573333 + AluJb SINE Alu 2 290 -22 889 199 6 0 chr2 162115273 162115429 -88572425 - FRAM SINE Alu -8 158 2 521 115 0 11 chr2 162117434 162117521 -88570333 - L1MA5 LINE L1 -6 6294 6209 249 139 0 0 chr2 162117883 162117926 -88569928 + (TC)n Simple_repeat Simple_repeat 2 44 0 1789 157 59 0 chr2 162118052 162118339 -88569515 + AluJb SINE Alu 6 309 -3 357 69 14 42 chr2 162118347 162118419 -88569435 + (GAAA)n Simple_repeat Simple_repeat 2 71 0 294 259 0 37 chr2 162118419 162118527 -88569327 - L1ME3 LINE L1 -107 6055 5952 253 262 48 10 chr2 162118540 162118643 -88569211 + L1ME LINE L1 5060 5166 -980 * 3022 193 35 2 chr2 162118640 162119709 -88568145 + L1MC1 LINE L1 4570 5668 -665 35456 81 13 5 chr2 162119709 162125816 -88562038 + L1PA6 LINE L1 11 6147 -7 3975 144 20 29 chr2 162125816 162126079 -88561775 + L1MC1 LINE L1 5653 5917 -416 2274 122 163 0 chr2 162126079 162126447 -88561407 + MSTA LTR MaLR 1 428 0 3975 144 20 29 chr2 162126447 162126867 -88560987 + L1MC1 LINE L1 5917 6333 0 1160 223 160 24 chr2 162126867 162127321 -88560533 + L1ME LINE L1 5156 5689 -479 382 314 59 3 chr2 162127883 162128042 -88559812 - MIR SINE MIR -82 180 19 1328 170 75 78 chr2 162128155 162128561 -88559293 - MLT1C LTR MaLR 0 390 1 198 0 0 0 chr2 162128976 162128998 -88558856 + (A)n Simple_repeat Simple_repeat 1 22 0 502 185 17 101 chr2 162129973 162130046 -88557808 + MER5A DNA MER1_type 4 65 -124 2263 110 0 3 chr2 162130046 162130346 -88557508 + AluSc SINE Alu 1 299 -10 502 185 17 101 chr2 162130346 162130391 -88557463 + MER5A DNA MER1_type 65 112 -77 622 235 0 15 chr2 162130457 162130589 -88557265 - MER5B DNA MER1_type -48 130 1 826 271 122 49 chr2 162130792 162131261 -88556593 + L2 LINE L2 2810 3312 -1 783 215 164 6 chr2 162131267 162131444 -88556410 + MER58A DNA MER1_type 1 205 -19 794 188 33 17 chr2 162131450 162131631 -88556223 - MER53 DNA DNA -5 184 1 1776 124 0 0 chr2 162132578 162132820 -88555034 - AluSx SINE Alu -70 242 1 473 306 153 23 chr2 162133073 162133380 -88554474 + L1ME3A LINE L1 5531 5877 -293 463 136 25 0 chr2 162133449 162133530 -88554324 + L1MB4 LINE L1 6098 6180 0 265 149 0 0 chr2 162133640 162133687 -88554167 - LTR66 LTR ERVL -170 440 394 2367 85 3 3 chr2 162133904 162134210 -88553644 - AluSq SINE Alu -7 306 1 2152 117 0 46 chr2 162134585 162134911 -88552943 + AluSq SINE Alu 1 311 -2 575 179 137 17 chr2 162135081 162135198 -88552656 - FLAM_A SINE Alu -1 132 2 446 110 0 33 chr2 162135215 162135306 -88552548 - L1PA15 LINE L1 -1 6164 6077 788 220 19 0 chr2 162135306 162135465 -88552389 + Charlie1a DNA MER1_type 5 166 -1289 33189 105 11 54 chr2 162135467 162141897 -88545957 + L1PA7 LINE L1 13 6153 -1 2913 158 45 79 chr2 162141912 162142707 -88545147 + Charlie1 DNA MER1_type 1993 2760 -1 354 280 56 0 chr2 162142785 162142892 -88544962 - MIR SINE MIR -64 198 86 468 340 39 27 chr2 162143297 162143374 -88544480 - MIR SINE MIR 0 262 187 2045 140 0 7 chr2 162143374 162143674 -88544180 - AluSg SINE Alu -12 298 1 468 340 39 27 chr2 162143674 162143689 -88544165 - MIR SINE MIR -75 187 174 8147 26 2 0 chr2 162143689 162145136 -88542718 + L1PA4 LINE L1 4707 6155 0 468 340 39 27 chr2 162145136 162145301 -88542553 - MIR SINE MIR -88 174 1 452 250 55 0 chr2 162145305 162145433 -88542421 + L2 LINE L2 3138 3272 0 251 250 53 0 chr2 162146049 162146125 -88541729 + MLT1L LTR MaLR 20 99 -516 * 338 227 146 45 chr2 162146105 162146215 -88541639 + MLT1J LTR MaLR 52 187 -237 4618 228 53 27 chr2 162146223 162148394 -88539460 + L1ME2 LINE L1 3926 6154 -10 686 262 56 72 chr2 162148405 162148645 -88539209 + MLT1J LTR MaLR 212 448 -63 2082 125 0 0 chr2 162148645 162148960 -88538894 + AluSx SINE Alu 1 315 0 686 262 56 72 chr2 162148960 162149023 -88538831 + MLT1J LTR MaLR 448 511 0 23 33 0 0 chr2 162149156 162149186 -88538668 + AT_rich Low_complexity Low_complexity 1 30 0 297 311 20 92 chr2 162149245 162149441 -88538413 + MIR SINE MIR 54 235 -27 219 36 0 0 chr2 162151450 162151478 -88536376 + (TG)n Simple_repeat Simple_repeat 1 28 0 510 265 38 0 chr2 162152521 162152653 -88535201 + L2 LINE L2 3136 3272 0 243 228 33 0 chr2 162152790 162152882 -88534972 + (TA)n Simple_repeat Simple_repeat 2 96 0 183 42 0 0 chr2 162153344 162153368 -88534486 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 441 282 73 16 chr2 162154443 162154567 -88533287 - L2 LINE L2 -4 3268 3138 22 0 0 0 chr2 162155268 162155290 -88532564 + AT_rich Low_complexity Low_complexity 1 22 0 1182 69 0 0 chr2 162156825 162156969 -88530885 + AluYa5 SINE Alu 149 292 -19 27 62 0 0 chr2 162160148 162160196 -88527658 + AT_rich Low_complexity Low_complexity 1 48 0 25 75 0 0 chr2 162160407 162160460 -88527394 + AT_rich Low_complexity Low_complexity 1 53 0 191 316 140 26 chr2 162160531 162160645 -88527209 + L2 LINE L2 3146 3272 0 1576 78 0 0 chr2 162160899 162161104 -88526750 + L1MA2 LINE L1 6100 6304 0 27 0 0 0 chr2 162161105 162161132 -88526722 + AT_rich Low_complexity Low_complexity 1 27 0 1392 289 118 32 chr2 162161414 162162514 -88525340 - L2 LINE L2 0 3313 2075 2012 237 24 63 chr2 162162558 162163098 -88524756 + LTR40a LTR ERVL 1 519 0 377 329 50 0 chr2 162163358 162163498 -88524356 + MLT1J2 LTR MaLR 16 163 -284 396 339 68 85 chr2 162163654 162164052 -88523802 + L2 LINE L2 2882 3272 0 2907 168 22 6 chr2 162165893 162166400 -88521454 - L1MB3 LINE L1 0 6183 5669 607 199 18 72 chr2 162166633 162166705 -88521149 - MER69 DNA AcHobo -2 2524 2450 2114 122 14 0 chr2 162166705 162167001 -88520853 + AluSx SINE Alu 1 300 -12 607 199 18 72 chr2 162167001 162167094 -88520760 - MER69 DNA AcHobo -76 2450 2368 472 314 26 7 chr2 162167317 162167470 -88520384 - MIR SINE MIR -14 248 93 1054 262 110 35 chr2 162168349 162169159 -88518695 - L2 LINE L2 0 3313 2438 1094 204 56 32 chr2 162169735 162169985 -88517869 - AluJo SINE Alu -12 300 45 336 268 21 21 chr2 162171050 162171147 -88516707 - MER103 DNA DNA -35 131 35 450 165 254 5 chr2 162172486 162172609 -88515245 - L1MC3 LINE L1 -2 7766 6186 797 73 92 0 chr2 162172609 162172718 -88515136 - AluSg/x SINE Alu -21 291 173 313 299 88 57 chr2 162172879 162173073 -88514781 + MIR3 SINE MIR 3 202 -6 205 292 66 44 chr2 162173331 162173468 -88514386 - L2 LINE L2 -455 2859 2720 2000 115 81 37 chr2 162173660 162173983 -88513871 + MER1B DNA MER1_type 1 337 0 1072 77 15 0 chr2 162174022 162174152 -88513702 + L1PA10 LINE L1 6032 6163 -5 1031 276 69 38 chr2 162174192 162174563 -88513291 + MLT1I LTR MaLR 42 394 -15 200 181 121 96 chr2 162175360 162175443 -88512411 - MIR SINE MIR -1 261 177 1082 231 139 12 chr2 162175455 162176070 -88511784 + LTR50 LTR ERVL 6 794 -1 180 345 115 7 chr2 162176072 162176211 -88511643 - MIR SINE MIR -96 166 13 513 248 0 17 chr2 162177363 162177480 -88510374 + MER91B DNA MER1_type 69 183 -7 283 287 149 6 chr2 162178221 162178395 -88509459 - L2 LINE L2 -404 2910 2712 311 314 111 7 chr2 162178441 162178594 -88509260 - MIR SINE MIR -82 180 12 228 148 33 33 chr2 162180108 162180169 -88507685 + (CA)n Simple_repeat Simple_repeat 2 62 0 221 278 103 21 chr2 162180445 162180542 -88507312 - L2 LINE L2 0 3272 3168 413 320 132 19 chr2 162182187 162182552 -88505302 - L2 LINE L2 -4 3309 2904 578 287 80 4 chr2 162182600 162182875 -88504979 - L2 LINE L2 -556 2758 2463 1594 113 123 39 chr2 162185177 162185461 -88502393 - AluSg SINE Alu -2 308 1 422 314 44 0 chr2 162185604 162185763 -88502091 + MIR SINE MIR 63 228 -34 235 296 28 0 chr2 162185839 162185910 -88501944 - MIR SINE MIR -80 182 110 1379 159 82 46 chr2 162186151 162186474 -88501380 + MER33 DNA MER1_type 1 323 -1 955 255 42 45 chr2 162186690 162187000 -88500854 - MER102a DNA MER1_type 0 330 22 2165 126 3 0 chr2 162187220 162187513 -88500341 + AluSg SINE Alu 1 294 -16 8633 115 8 30 chr2 162188385 162188535 -88499319 + HSMAR2 DNA Mariner 2 154 -1148 1765 169 21 0 chr2 162188535 162188825 -88499029 + AluJb SINE Alu 2 297 -15 8633 115 8 30 chr2 162188825 162189919 -88497935 + HSMAR2 DNA Mariner 154 1218 -84 1870 143 0 7 chr2 162189919 162190221 -88497633 - AluJb SINE Alu 0 312 13 8633 115 8 30 chr2 162190221 162190303 -88497551 + HSMAR2 DNA Mariner 1218 1300 -2 2128 121 0 0 chr2 162190703 162191014 -88496840 + AluSx SINE Alu 3 313 0 22 0 0 0 chr2 162191971 162191993 -88495861 + AT_rich Low_complexity Low_complexity 1 22 0 328 285 135 34 chr2 162192066 162192333 -88495521 - L2 LINE L2 -1 3312 3019 182 214 24 0 chr2 162192499 162192541 -88495313 + L2 LINE L2 2755 2797 -517 887 233 51 67 chr2 162192617 162192948 -88494906 + L2 LINE L2 2988 3313 0 237 213 0 0 chr2 162193803 162193850 -88494004 - MER103 DNA DNA -71 95 49 251 289 39 10 chr2 162194163 162194267 -88493587 - MIR SINE MIR -142 120 14 22 0 0 0 chr2 162195419 162195441 -88492413 + AT_rich Low_complexity Low_complexity 1 22 0 230 404 66 0 chr2 162195640 162195776 -88492078 - L2 LINE L2 -5 3267 3123 518 277 14 0 chr2 162196104 162196252 -88491602 + MER91B DNA MER1_type 28 177 -13 322 262 87 10 chr2 162197095 162197198 -88490656 + L2 LINE L2 3162 3272 0 2020 172 12 65 chr2 162197233 162197645 -88490209 - MLT2C1 LTR ERVL -7 390 1 244 314 0 0 chr2 162197815 162197885 -88489969 - L2 LINE L2 -86 3186 3117 21 0 0 0 chr2 162199668 162199689 -88488165 + AT_rich Low_complexity Low_complexity 1 21 0 1313 246 33 26 chr2 162200082 162200673 -88487181 + L2 LINE L2 2677 3268 -45 192 77 0 0 chr2 162201637 162201663 -88486191 + (T)n Simple_repeat Simple_repeat 1 26 0 1028 129 0 25 chr2 162201706 162201869 -88485985 - L1PA13 LINE L1 -11 6152 5994 564 15 0 0 chr2 162201881 162201946 -88485908 + (GAAA)n Simple_repeat Simple_repeat 1 65 0 213 311 0 0 chr2 162201946 162202007 -88485847 - MIR SINE MIR -143 119 59 240 263 0 0 chr2 162203126 162203183 -88484671 - Charlie8 DNA MER1_type 0 2417 2361 351 285 159 60 chr2 162203187 162203552 -88484302 - Charlie8 DNA MER1_type -1875 542 142 536 257 0 7 chr2 162204027 162204163 -88483691 - L1M4 LINE L1 -1822 4324 4190 390 173 0 40 chr2 162204431 162204506 -88483348 + MLT1H LTR MaLR 407 478 -71 360 0 0 0 chr2 162205378 162205418 -88482436 + (TG)n Simple_repeat Simple_repeat 2 41 0 1940 186 68 6 chr2 162205779 162206144 -88481710 + MSTD LTR MaLR 8 395 -1 479 347 63 5 chr2 162209425 162209647 -88478207 - MIR SINE MIR 0 262 28 477 256 48 72 chr2 162209729 162209936 -88477918 + MIR3 SINE MIR 4 205 -3 428 273 125 51 chr2 162211097 162211394 -88476460 - L1MC/D LINE L1 -351 5770 5485 243 279 203 17 chr2 162211463 162211622 -88476232 - MIR3 SINE MIR -65 143 2 225 83 0 0 chr2 162212629 162212665 -88475189 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1322 224 119 45 chr2 162213687 162213857 -88473997 - Charlie7 DNA MER1_type 0 2612 2456 2349 97 3 7 chr2 162213857 162214167 -88473687 + AluSx SINE Alu 4 312 0 1322 224 119 45 chr2 162214167 162214549 -88473305 - Charlie7 DNA MER1_type -156 2456 2019 313 156 62 31 chr2 162214543 162214607 -88473247 - LTR33 LTR ERVL -371 150 85 * 238 229 0 16 chr2 162214663 162214724 -88473130 - Charlie7 DNA MER1_type -631 1981 1922 460 151 32 0 chr2 162214734 162214827 -88473027 - L1MB3 LINE L1 -3 6180 6085 2286 69 7 13 chr2 162214877 162215182 -88472672 - L1MA4 LINE L1 -353 5947 5645 787 226 122 63 chr2 162215185 162215223 -88472631 - Charlie7 DNA MER1_type -615 1997 1963 1710 197 3 0 chr2 162215223 162215522 -88472332 - AluJo SINE Alu -12 300 1 787 226 122 63 chr2 162215522 162215802 -88472052 - Charlie7 DNA MER1_type -649 1963 1660 908 293 103 19 chr2 162215929 162216189 -88471665 - LTR33 LTR ERVL 0 521 284 1830 163 120 6 chr2 162216189 162216539 -88471315 - MLT1B LTR MaLR 0 390 1 908 293 103 19 chr2 162216539 162216745 -88471109 - LTR33 LTR ERVL -237 284 16 223 179 54 71 chr2 162216945 162217001 -88470853 - MER91A DNA MER1_type -15 181 127 461 286 26 32 chr2 162217550 162217704 -88470150 + MER91B DNA MER1_type 33 185 -5 243 290 8 38 chr2 162219045 162219176 -88468678 + CT-rich Low_complexity Low_complexity 1 127 0 2369 233 254 86 chr2 162219523 162219542 -88468312 + L1MC4 LINE L1 6459 6473 -1569 1782 136 188 22 chr2 162219542 162219909 -88467945 - MSTA LTR MaLR 0 428 1 2369 233 254 86 chr2 162219909 162219993 -88467861 + L1MC4 LINE L1 6473 6542 -1500 1511 187 7 21 chr2 162219993 162220277 -88467577 + AluJo SINE Alu 27 306 -6 2369 233 254 86 chr2 162220277 162220491 -88467363 + L1MC4 LINE L1 6542 6719 -1323 1712 95 56 4 chr2 162220491 162220722 -88467132 + AluSx SINE Alu 1 243 -69 2369 233 254 86 chr2 162220722 162221572 -88466282 + L1MC4 LINE L1 6719 7825 -217 195 42 0 0 chr2 162222718 162222742 -88465112 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 229 227 172 39 chr2 162223660 162223788 -88464066 - L1ME4a LINE L1 0 6121 5977 1495 188 24 14 chr2 162223794 162224082 -88463772 - AluJo SINE Alu -21 291 1 285 219 89 8 chr2 162224100 162224223 -88463631 - L1ME4a LINE L1 -190 5931 5799 247 294 185 41 chr2 162224451 162224743 -88463111 + L3 LINE CR1 1177 1510 -67 22 0 0 0 chr2 162225352 162225374 -88462480 + GC_rich Low_complexity Low_complexity 1 22 0 258 274 179 56 chr2 162326558 162326810 -88361044 + L2 LINE L2 3023 3305 -8 23 0 0 0 chr2 162327764 162327787 -88360067 + AT_rich Low_complexity Low_complexity 1 23 0 195 315 27 14 chr2 162327904 162327977 -88359877 + MIR3 SINE MIR 112 185 -23 2006 125 0 27 chr2 162328358 162328655 -88359199 - AluSq SINE Alu -24 289 1 1449 196 20 55 chr2 162331075 162331409 -88356445 - L1ME4a LINE L1 -772 5374 5055 1047 165 34 0 chr2 162331409 162331615 -88356239 - L1MA6 LINE L1 -1 6299 6087 1449 196 20 55 chr2 162331615 162331677 -88356177 - L1ME4a LINE L1 -1091 5055 4992 9161 179 31 23 chr2 162331704 162334084 -88353770 - L1PA16 LINE L1 -1 6165 3759 2209 93 33 13 chr2 162334084 162334386 -88353468 - AluY SINE Alu -1 310 3 9161 179 31 23 chr2 162334386 162335096 -88352758 - L1PA16 LINE L1 -2407 3759 3056 2920 226 109 15 chr2 162335095 162335604 -88352250 - L1ME4a LINE L1 -1142 5004 4544 * 1907 183 0 0 chr2 162335604 162335910 -88351944 - AluJb SINE Alu -4 308 3 2920 226 109 15 chr2 162335910 162336261 -88351593 - L1ME4a LINE L1 -1602 4544 4063 2861 249 36 8 chr2 162336264 162337177 -88350677 - L1ME4a LINE L1 -2988 3158 2220 218 231 58 0 chr2 162337586 162337638 -88350216 - MIR3 SINE MIR -42 166 112 5823 25 0 0 chr2 162338059 162339076 -88348778 + L1P1 LINE L1 4690 5706 -449 9568 24 1 0 chr2 162339176 162341088 -88346766 + L1PA2 LINE L1 4250 6166 0 186 189 0 0 chr2 162341809 162341846 -88346008 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 201 207 0 85 chr2 162342902 162342984 -88344870 + A-rich Low_complexity Low_complexity 2 76 0 226 293 129 7 chr2 162343044 162343191 -88344663 - MIR SINE MIR 0 262 98 979 204 23 5 chr2 162343459 162343675 -88344179 + L1ME1 LINE L1 5734 5953 -213 458 219 34 25 chr2 162343676 162343795 -88344059 + L1ME1 LINE L1 6043 6162 -2 335 315 42 7 chr2 162344222 162344365 -88343489 + HsTC2 DNA Tc2 490 637 -1261 1033 260 12 4 chr2 162344777 162345035 -88342819 + HsTC2 DNA Tc2 632 891 -1007 2153 72 8 0 chr2 162345200 162345462 -88342392 - AluSc SINE Alu -43 266 3 468 0 0 0 chr2 162345752 162345804 -88342050 + (TG)n Simple_repeat Simple_repeat 2 53 0 293 308 58 0 chr2 162346601 162346721 -88341133 - L2 LINE L2 -3 3310 3184 792 188 53 0 chr2 162347353 162347523 -88340331 + MIR SINE MIR 28 206 -56 269 160 309 0 chr2 162347902 162347996 -88339858 + MIR SINE MIR 130 252 -10 1612 210 46 9 chr2 162348388 162348735 -88339119 + MLT1A1 LTR MaLR 6 365 0 222 37 0 0 chr2 162349062 162349089 -88338765 + (TG)n Simple_repeat Simple_repeat 2 28 0 14014 106 5 7 chr2 162349103 162349794 -88338060 - L1PA8 LINE L1 -2 6170 5479 2059 133 14 3 chr2 162349794 162350088 -88337766 - AluSg SINE Alu -13 297 1 14014 106 5 7 chr2 162350088 162352280 -88335574 - L1PA8 LINE L1 -693 5479 3305 8173 224 23 21 chr2 162352726 162355543 -88332311 + L1PA16 LINE L1 3127 5938 -228 326 255 78 20 chr2 162355645 162355747 -88332107 + MIR SINE MIR 29 136 -126 246 246 222 40 chr2 162355802 162355928 -88331926 + L2 LINE L2 3146 3294 -19 235 341 78 16 chr2 162356257 162356386 -88331468 - L3 LINE CR1 -802 775 639 762 318 109 23 chr2 162357888 162358120 -88329734 - L2 LINE L2 -4 3309 3098 1504 214 70 62 chr2 162358120 162358619 -88329235 - MLT1D LTR MaLR 0 505 3 762 318 109 23 chr2 162358619 162358964 -88328890 - L2 LINE L2 -215 3098 2686 535 301 32 58 chr2 162358964 162359306 -88328548 + L1ME3A LINE L1 5559 5891 -279 799 277 148 51 chr2 162359353 162360073 -88327781 - L2 LINE L2 -9 3304 2533 260 215 46 0 chr2 162360099 162360164 -88327690 - L1MC4 LINE L1 0 8042 7975 507 151 0 0 chr2 162360190 162360283 -88327571 + (CA)n Simple_repeat Simple_repeat 1 93 0 3969 190 78 32 chr2 162360283 162361250 -88326604 - L1MC4 LINE L1 -229 7813 6803 2570 253 75 19 chr2 162361312 162362135 -88325719 - L2 LINE L2 -826 2488 1620 916 207 67 110 chr2 162362143 162362519 -88325335 - MLT1E2 LTR MaLR -161 344 1 1276 245 117 7 chr2 162362816 162363228 -88324626 + LTR33A LTR ERVL 65 521 -2 1154 175 53 0 chr2 162364882 162365088 -88322766 + MER20 DNA MER1_type 1 217 -2 2190 129 0 0 chr2 162365817 162366120 -88321734 + AluSx SINE Alu 3 305 -7 396 0 0 0 chr2 162366652 162366696 -88321158 + (CA)n Simple_repeat Simple_repeat 1 44 0 316 224 40 13 chr2 162367575 162367651 -88320203 + LTR16C LTR ERVL 412 489 -2 452 322 131 62 chr2 162368037 162368441 -88319413 + L2 LINE L2 2837 3268 -4 242 256 26 0 chr2 162368754 162368832 -88319022 + MLT1L LTR MaLR 496 575 -40 627 196 12 68 chr2 162368839 162369002 -88318852 - L1PA16 LINE L1 -5 6161 6008 308 343 79 17 chr2 162369534 162369712 -88318142 + MIR3 SINE MIR 20 208 0 29 47 0 0 chr2 162370493 162370536 -88317318 + AT_rich Low_complexity Low_complexity 1 43 0 186 43 0 0 chr2 162371926 162371949 -88315905 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1582 260 56 27 chr2 162372034 162372591 -88315263 + L1MC/D LINE L1 4512 5084 -1062 28 0 0 0 chr2 162372605 162372633 -88315221 + AT_rich Low_complexity Low_complexity 1 28 0 1464 302 104 35 chr2 162372716 162373954 -88313900 + L2 LINE L2 1978 3313 0 254 256 139 0 chr2 162373965 162374094 -88313760 + L1MC/D LINE L1 5704 5850 -1958 943 201 40 25 chr2 162374268 162374467 -88313387 + MER20 DNA MER1_type 13 214 -5 740 269 79 18 chr2 162375848 162376075 -88311779 + MIR SINE MIR 22 262 0 972 239 122 62 chr2 162376409 162376777 -88311077 + LTR16C LTR ERVL 102 491 0 312 172 0 0 chr2 162376878 162376936 -88310918 + (TCTA)n Simple_repeat Simple_repeat 2 59 0 674 220 173 0 chr2 162380168 162380359 -88307495 - MER58A DNA MER1_type 0 224 1 898 281 82 63 chr2 162380821 162381081 -88306773 - L1MEd LINE L1 -4893 1226 972 2396 97 0 13 chr2 162381081 162381390 -88306464 - AluSc SINE Alu -4 305 1 898 281 82 63 chr2 162381390 162382085 -88305769 - L1MEd LINE L1 -5147 972 253 21 0 0 0 chr2 162382355 162382376 -88305478 + AT_rich Low_complexity Low_complexity 1 21 0 42305 35 1 4 chr2 162383584 162389754 -88298100 - L1PA3 LINE L1 -1 6154 2 278 180 16 0 chr2 162391150 162391211 -88296643 + CT-rich Low_complexity Low_complexity 1 62 0 2024 113 32 3 chr2 162391211 162391494 -88296360 - AluSg SINE Alu -18 292 2 399 297 53 24 chr2 162392245 162392593 -88295261 + L2 LINE L2 2699 3120 -193 41049 43 10 4 chr2 162393167 162399286 -88288568 + L1PA4 LINE L1 1 6152 -3 21 0 0 0 chr2 162399368 162399389 -88288465 + AT_rich Low_complexity Low_complexity 1 21 0 348 176 0 0 chr2 162399419 162399487 -88288367 + (TG)n Simple_repeat Simple_repeat 1 68 0 24 32 0 0 chr2 162399849 162399880 -88287974 + AT_rich Low_complexity Low_complexity 1 31 0 266 367 55 3 chr2 162399890 162400220 -88287634 + L1MEc LINE L1 36 382 -6014 234 274 103 26 chr2 162400537 162400771 -88287083 + L1MEc LINE L1 711 962 -5243 * 2136 232 97 15 chr2 162400766 162401084 -88286770 + L1MEc LINE L1 2252 2542 -3673 1470 191 44 39 chr2 162401084 162401446 -88286408 - MLT1A1 LTR MaLR -1 364 1 2136 232 97 15 chr2 162401446 162402001 -88285853 + L1MEc LINE L1 2542 3197 -3018 257 100 40 0 chr2 162402002 162402052 -88285802 + Alu SINE Alu 251 302 0 427 232 9 9 chr2 162402373 162402485 -88285369 + L1MEc LINE L1 3509 3620 -2595 857 218 142 12 chr2 162402555 162402899 -88284955 + Charlie1b DNA MER1_type 106 494 -29 280 267 12 0 chr2 162402943 162403029 -88284825 + L1MEc LINE L1 3658 3744 -2471 2772 262 38 23 chr2 162403051 162403838 -88284016 + L1PA15 LINE L1 1 799 -5988 14305 207 28 14 chr2 162403842 162409301 -88278553 + L1PA15 LINE L1 1236 6811 -5 1580 323 72 36 chr2 162409526 162410687 -88277167 + HERV16 LTR ERVL 1 1203 -3793 847 188 52 31 chr2 162411001 162411193 -88276661 - MER3 DNA MER1_type 0 209 14 2870 324 55 26 chr2 162411256 162411436 -88276418 + HERV16 LTR ERVL 1738 1911 -3574 1443 172 62 52 chr2 162411436 162411727 -88276127 + AluJo SINE Alu 1 294 -18 2870 324 55 26 chr2 162411727 162413718 -88274136 + HERV16 LTR ERVL 1911 4001 -1484 482 250 44 7 chr2 162413706 162413842 -88274012 + HERV16 LTR ERVL 4167 4307 -1347 * 2548 206 100 39 chr2 162414044 162414762 -88273092 + L1ME2 LINE L1 4978 5779 -385 1882 182 19 14 chr2 162414762 162415125 -88272729 + MLT1A1 LTR MaLR 1 365 0 2548 206 100 39 chr2 162415125 162415536 -88272318 + L1ME2 LINE L1 5779 6164 0 23 54 0 0 chr2 162416646 162416683 -88271171 + AT_rich Low_complexity Low_complexity 1 37 0 3902 251 57 47 chr2 162417148 162418675 -88269179 + L1M4b LINE L1 17 1558 -5301 * 4786 165 39 22 chr2 162418645 162419584 -88268270 + L1MA7 LINE L1 5986 6946 -156 1165 201 54 62 chr2 162419584 162419952 -88267902 - MLT1A1 LTR MaLR 0 365 1 4786 165 39 22 chr2 162419952 162420110 -88267744 + L1MA7 LINE L1 6946 7100 -2 262 232 0 0 chr2 162420104 162420173 -88267681 + L1M4b LINE L1 1544 1612 -5247 * 1309 290 79 3 chr2 162420177 162420832 -88267022 + L1M4b LINE L1 1711 2415 -4544 31 26 0 0 chr2 162421025 162421063 -88266791 + AT_rich Low_complexity Low_complexity 1 38 0 388 276 95 65 chr2 162421075 162421215 -88266639 + L1M4b LINE L1 2586 2737 -4401 198 91 0 0 chr2 162421215 162421248 -88266606 + (TA)n Simple_repeat Simple_repeat 1 33 0 388 276 95 65 chr2 162421248 162421339 -88266515 + L1M4b LINE L1 2737 2824 -4314 7771 138 36 23 chr2 162421361 162422198 -88265656 + Tigger1 DNA MER2_type 6 831 -1587 2114 114 3 56 chr2 162422198 162422522 -88265332 + AluSq SINE Alu 1 307 -6 7771 138 36 23 chr2 162422522 162422705 -88265149 + Tigger1 DNA MER2_type 831 1010 -1408 2514 73 18 0 chr2 162422705 162423047 -88264807 + L1PA6 LINE L1 5806 6153 -1 1581 120 56 3 chr2 162423057 162423341 -88264513 + L1MA3 LINE L1 6007 6305 0 7771 138 36 23 chr2 162423341 162423540 -88264314 + Tigger1 DNA MER2_type 1018 1213 -1205 1662 189 25 3 chr2 162423540 162423826 -88264028 - AluJb SINE Alu -20 292 1 7771 138 36 23 chr2 162423826 162424054 -88263800 + Tigger1 DNA MER2_type 1213 1484 -934 42498 37 1 1 chr2 162424060 162430193 -88257661 + L1PA3 LINE L1 9 6171 0 307 0 0 0 chr2 162430193 162430227 -88257627 + (TAA)n Simple_repeat Simple_repeat 3 180 0 5986 105 30 26 chr2 162430227 162431058 -88256796 + Tigger1 DNA MER2_type 1466 2302 -116 2243 116 3 0 chr2 162431058 162431361 -88256493 - AluSp SINE Alu -9 304 1 5986 105 30 26 chr2 162431361 162431479 -88256375 + Tigger1 DNA MER2_type 2302 2418 0 2648 242 31 7 chr2 162431552 162432404 -88255450 + L1M4b LINE L1 2914 3743 -3214 816 140 0 0 chr2 162432410 162432524 -88255330 + AluJb SINE Alu 1 114 -198 1992 144 53 6 chr2 162432524 162432863 -88254991 - THE1A LTR MaLR 0 355 1 9140 117 13 2 chr2 162432863 162434416 -88253438 - THE1-int LTR MaLR 0 1580 1 624 212 7 48 chr2 162434416 162434562 -88253292 + AluJb SINE Alu 110 249 -63 295 133 0 0 chr2 162434587 162434632 -88253222 - THE1-int LTR MaLR -928 652 608 * 728 118 0 34 chr2 162434621 162434740 -88253114 + THE1-int LTR MaLR 953 1067 -513 22 0 0 0 chr2 162434744 162434766 -88253088 + AT_rich Low_complexity Low_complexity 1 22 0 7844 125 37 1 chr2 162434767 162436810 -88251044 - L1PA10 LINE L1 -11 6157 4067 429 229 248 0 chr2 162437958 162438111 -88249743 - MIR SINE MIR -63 199 9 745 279 73 0 chr2 162438436 162438640 -88249214 + MLT1H1 LTR MaLR 197 415 -140 574 179 28 0 chr2 162438627 162438733 -88249121 + MER45A DNA AcHobo 69 177 -1 * 180 0 0 0 chr2 162438756 162438776 -88249078 + (TA)n Simple_repeat Simple_repeat 2 21 0 269 300 100 43 chr2 162439797 162439937 -88247917 - L2 LINE L2 -2 3270 3123 402 57 0 0 chr2 162441185 162441238 -88246616 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 2525 142 42 2 chr2 162442290 162442700 -88245154 + MSTB LTR MaLR 1 426 0 234 320 49 49 chr2 162443530 162443652 -88244202 - MIR3 SINE MIR 0 208 87 1262 236 93 16 chr2 162444876 162445387 -88242467 - L1ME2 LINE L1 -129 6035 5441 * 5057 198 21 18 chr2 162445383 162447397 -88240457 - L1MC1 LINE L1 -178 6155 4140 1219 229 153 10 chr2 162447397 162447782 -88240072 - MSTB2 LTR MaLR 0 457 18 3171 247 11 14 chr2 162447786 162448657 -88239197 - L1MC1 LINE L1 -2000 4146 3278 2694 123 18 0 chr2 162448657 162449097 -88238757 - L1MA5 LINE L1 -2 7319 6872 1445 157 19 0 chr2 162449110 162449426 -88238428 - L1MA5 LINE L1 -743 6424 6141 * 9124 201 29 20 chr2 162449422 162454021 -88233833 - L1MA5 LINE L1 -1949 5218 644 3759 200 29 65 chr2 162454102 162455026 -88232828 - L1M2a LINE L1 -6272 896 6 2107 209 35 14 chr2 162455028 162455649 -88232205 - L1MCa LINE L1 -2840 3586 2953 364 205 16 131 chr2 162455636 162455758 -88232096 - L1MCa LINE L1 -5746 680 573 * 2441 196 52 63 chr2 162455761 162456377 -88231477 - L1MCa LINE L1 -5811 615 7 * 2606 277 85 27 chr2 162456364 162457964 -88229890 - L1ME LINE L1 -4003 2258 519 516 75 0 0 chr2 162458300 162458367 -88229487 - MLT2C2 LTR ERVL -397 67 1 25 0 0 0 chr2 162458771 162458796 -88229058 + AT_rich Low_complexity Low_complexity 1 25 0 735 164 33 0 chr2 162458809 162458931 -88228923 + FLAM_C SINE Alu 1 126 -7 2098 113 7 7 chr2 162458935 162459219 -88228635 + AluSx SINE Alu 1 284 -28 405 0 0 0 chr2 162459227 162459272 -88228582 + (CAT)n Simple_repeat Simple_repeat 2 46 0 804 105 0 0 chr2 162459474 162459588 -88228266 + AluSg/x SINE Alu 189 302 -7 26 0 0 0 chr2 162460806 162460832 -88227022 + AT_rich Low_complexity Low_complexity 1 26 0 842 291 73 18 chr2 162461944 162462219 -88225635 + MLT1J LTR MaLR 5 294 -217 252 304 133 63 chr2 162463157 162463427 -88224427 + L2 LINE L2 2807 3095 -177 387 0 0 0 chr2 162464693 162464736 -88223118 + (CA)n Simple_repeat Simple_repeat 2 44 0 241 254 0 16 chr2 162466652 162466715 -88221139 + GA-rich Low_complexity Low_complexity 2 63 0 245 216 32 17 chr2 162467311 162467399 -88220455 + L1MB3 LINE L1 5342 5434 -746 * 3088 245 38 17 chr2 162467398 162468324 -88219530 + L1M4 LINE L1 3328 4272 -1874 907 163 0 0 chr2 162468326 162468486 -88219368 + L1MB3 LINE L1 5984 6143 -40 16740 164 32 15 chr2 162468494 162471094 -88216760 + L1PB1 LINE L1 1 2556 -4311 2250 109 3 0 chr2 162471094 162471398 -88216456 + AluY SINE Alu 1 305 -6 16740 164 32 15 chr2 162471398 162475157 -88212697 + L1PB1 LINE L1 2556 6490 -377 364 37 37 0 chr2 162475157 162475211 -88212643 + (TA)n Simple_repeat Simple_repeat 2 57 0 16740 164 32 15 chr2 162475211 162475592 -88212262 + L1PB1 LINE L1 6490 6863 -4 276 0 96 19 chr2 162475605 162475657 -88212197 + L1MB4 LINE L1 6125 6180 0 207 302 302 0 chr2 162476205 162476301 -88211553 - L2 LINE L2 -7 3265 3141 488 243 146 27 chr2 162476859 162477160 -88210694 + L1MC4 LINE L1 7691 8027 -15 228 299 15 0 chr2 162477210 162477277 -88210577 + MIR3 SINE MIR 109 176 -32 228 149 0 0 chr2 162477342 162477389 -88210465 + (T)n Simple_repeat Simple_repeat 1 47 0 29524 32 14 1 chr2 162477389 162483417 -88204437 - L1PA2 LINE L1 0 6155 2 2383 164 42 11 chr2 162483692 162484168 -88203686 - L1MC3 LINE L1 -21 7764 7274 1118 305 24 12 chr2 162484184 162484607 -88203247 - L1MCb LINE L1 -5617 428 1 210 37 0 0 chr2 162484913 162484940 -88202914 + (TC)n Simple_repeat Simple_repeat 2 28 0 191 246 18 35 chr2 162485062 162485119 -88202735 + MIR SINE MIR 157 212 -50 212 123 27 68 chr2 162485212 162485285 -88202569 + T-rich Low_complexity Low_complexity 1 70 0 180 339 32 0 chr2 162485398 162485460 -88202394 - L3b LINE CR1 -160 1423 1360 183 80 0 0 chr2 162487069 162487094 -88200760 + (GGGAA)n Simple_repeat Simple_repeat 5 29 0 523 90 20 80 chr2 162487141 162487241 -88200613 - L1PA16 LINE L1 0 6166 6073 4349 12 4 0 chr2 162487243 162487759 -88200095 + L1PA2 LINE L1 5429 5946 -209 250 261 10 0 chr2 162488096 162488160 -88199694 + MIR SINE MIR 98 148 -60 399 256 128 13 chr2 162488168 162488324 -88199530 - MIR SINE MIR 0 262 89 1226 261 37 22 chr2 162488357 162488866 -88198988 + MER113 DNA MER1_type? 1 517 -4 269 315 19 9 chr2 162489143 162489251 -88198603 + LTR67 LTR ERVL 440 548 -9 312 320 123 35 chr2 162490326 162490529 -88197325 - MIR SINE MIR -40 222 2 23 0 0 0 chr2 162490539 162490562 -88197292 + AT_rich Low_complexity Low_complexity 1 23 0 1449 324 107 59 chr2 162491222 162491484 -88196370 - L2 LINE L2 -1311 2003 1755 426 39 0 0 chr2 162491484 162491536 -88196318 + (TG)n Simple_repeat Simple_repeat 2 53 0 1449 324 107 59 chr2 162491536 162491966 -88195888 - L2 LINE L2 -1559 1755 1347 2322 103 0 3 chr2 162491966 162492276 -88195578 + AluSq SINE Alu 1 309 -4 1449 324 107 59 chr2 162492276 162493316 -88194538 - L2 LINE L2 -1967 1347 187 2535 236 13 22 chr2 162493603 162494277 -88193577 + L1ME1 LINE L1 5494 6161 -5 2001 212 114 63 chr2 162494305 162495065 -88192789 + L1ME1 LINE L1 5317 6115 -51 591 201 12 47 chr2 162494959 162495128 -88192726 + L1MA10 LINE L1 6171 6333 -1 * 1209 144 15 0 chr2 162496638 162496833 -88191021 + L1PA16 LINE L1 5956 6153 -13 384 22 0 0 chr2 162497121 162497166 -88190688 + (CA)n Simple_repeat Simple_repeat 1 45 0 339 282 77 22 chr2 162497509 162497690 -88190164 - HAL1 LINE L1 -74 2433 2243 781 264 134 25 chr2 162497873 162498187 -88189667 - HAL1 LINE L1 -616 1891 1544 1549 134 119 34 chr2 162498192 162498461 -88189393 - AluSx SINE Alu -12 300 9 738 279 171 41 chr2 162498521 162499260 -88188594 - L2 LINE L2 -4 3309 2470 1846 158 14 0 chr2 162499318 162499610 -88188244 - AluJb SINE Alu -16 296 1 2664 193 86 32 chr2 162499938 162500161 -88187693 - MER69 DNA AcHobo -1 2525 2316 216 0 0 0 chr2 162500161 162500185 -88187669 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2664 193 86 32 chr2 162500185 162500686 -88187168 - MER69 DNA AcHobo -210 2316 1736 2832 142 62 30 chr2 162500686 162501132 -88186722 + L1MA4 LINE L1 5682 6153 -147 1777 75 0 0 chr2 162501132 162501359 -88186495 + AluY SINE Alu 71 297 -14 2832 142 62 30 chr2 162501359 162501512 -88186342 + L1MA4 LINE L1 6153 6300 0 2664 193 86 32 chr2 162501512 162501681 -88186173 - MER69 DNA AcHobo -790 1736 1578 2650 249 92 16 chr2 162501685 162502550 -88185304 - MER69 DNA AcHobo -1520 1006 1 1778 182 0 3 chr2 162504241 162504527 -88183327 + 7SLRNA srpRNA srpRNA 25 309 -11 291 182 18 0 chr2 162504577 162504632 -88183222 - L2 LINE L2 0 3272 3217 * 379 281 0 50 chr2 162504631 162504752 -88183102 + L2 LINE L2 3197 3311 -2 1715 140 169 63 chr2 162504830 162505287 -88182567 - MLT1D LTR MaLR 0 505 1 243 356 141 0 chr2 162505310 162505459 -88182395 - L2 LINE L2 -189 3083 2914 377 248 55 0 chr2 162505707 162505816 -88182038 - Charlie4 DNA MER1_type -27 1934 1820 2187 76 7 0 chr2 162505965 162506240 -88181614 + AluSp SINE Alu 37 313 0 24 67 0 0 chr2 162506413 162506458 -88181396 + AT_rich Low_complexity Low_complexity 1 45 0 210 333 242 8 chr2 162506458 162506578 -88181276 + L2 LINE L2 3117 3264 -8 10222 177 29 21 chr2 162506581 162507473 -88180381 - L1MC3 LINE L1 -15 7770 6886 396 0 0 0 chr2 162507473 162507517 -88180337 + (TG)n Simple_repeat Simple_repeat 2 45 0 10222 177 29 21 chr2 162507517 162507975 -88179879 - L1MC3 LINE L1 -899 6886 6433 2196 143 25 0 chr2 162507975 162508332 -88179522 - MER47A DNA MER2_type 0 366 1 10222 177 29 21 chr2 162508332 162508898 -88178956 - L1MC3 LINE L1 -1352 6433 5831 2045 149 3 31 chr2 162508898 162509219 -88178635 + AluSx SINE Alu 1 312 0 10222 177 29 21 chr2 162509219 162509499 -88178355 - L1MC3 LINE L1 -1954 5831 5555 2449 154 2 10 chr2 162511687 162512102 -88175752 - MER47B DNA MER2_type 0 418 7 1911 197 45 16 chr2 162512647 162513093 -88174761 + L1MD3 LINE L1 7537 7995 0 455 247 160 40 chr2 162513246 162513521 -88174333 - MLT1K LTR MaLR 0 588 281 330 260 42 10 chr2 162513531 162513627 -88174227 + L1MEc LINE L1 1762 1860 -4536 799 242 47 0 chr2 162513647 162513837 -88174017 - MER58C DNA MER1_type -16 199 1 2987 222 62 21 chr2 162513840 162515004 -88172850 + L1MEc LINE L1 1868 3047 -3168 1950 282 86 28 chr2 162515010 162516059 -88171795 - L2 LINE L2 -12 3301 2208 461 268 87 0 chr2 162516062 162516189 -88171665 - LTR33 LTR ERVL -8 513 376 858 248 180 6 chr2 162516491 162516818 -88171036 - L2 LINE L2 -1089 2225 1842 319 229 0 0 chr2 162516841 162516902 -88170952 + AluJ/FLAM SINE Alu 1 61 -241 1005 172 6 11 chr2 162516922 162517096 -88170758 + FRAM SINE Alu 1 165 -11 234 116 0 70 chr2 162517256 162517299 -88170555 + Alu SINE Alu 250 289 -11 549 248 56 96 chr2 162517299 162517569 -88170285 - L2 LINE L2 -1489 1825 1567 184 376 51 8 chr2 162517584 162517701 -88170153 + MIR SINE MIR 141 262 0 387 0 0 0 chr2 162518744 162518787 -88169067 + (CA)n Simple_repeat Simple_repeat 2 44 0 269 301 43 0 chr2 162519336 162519429 -88168425 + MIR SINE MIR 91 187 -75 216 0 0 0 chr2 162519569 162519593 -88168261 + (T)n Simple_repeat Simple_repeat 1 24 0 841 193 39 0 chr2 162519917 162520098 -88167756 + MER53 DNA DNA 1 188 -1 642 292 70 12 chr2 162520625 162520868 -88166986 + MIR SINE MIR 2 258 -4 370 265 38 45 chr2 162521301 162521438 -88166416 + MER5B DNA MER1_type 1 145 -44 251 328 23 23 chr2 162521468 162521596 -88166258 + MIR SINE MIR 21 148 -114 1840 178 0 6 chr2 162521789 162522103 -88165751 - AluJo SINE Alu 0 312 1 204 136 30 15 chr2 162522156 162522222 -88165632 + (TA)n Simple_repeat Simple_repeat 1 67 0 1511 253 47 20 chr2 162522726 162523320 -88164534 - L1MCc LINE L1 -3905 3217 2608 690 213 49 0 chr2 162523358 162523522 -88164332 + MER58A DNA MER1_type 38 209 -15 1705 188 7 3 chr2 162523658 162523945 -88163909 - AluJo SINE Alu -24 288 1 3312 255 62 60 chr2 162523958 162526238 -88161616 - L1MCc LINE L1 -4611 2511 25 290 75 0 0 chr2 162526552 162526592 -88161262 - MLT2B1 LTR ERVL -8 456 417 712 157 19 22 chr2 162526620 162526772 -88161082 - L1PA15 LINE L1 -261 5904 5748 2158 44 15 0 chr2 162526781 162527054 -88160800 - L1PA7 LINE L1 0 6154 5878 1007 236 103 61 chr2 162527090 162527517 -88160337 - MLT2B1 LTR ERVL -75 445 1 231 275 225 45 chr2 162527665 162527843 -88160011 - LTR40a LTR ERVL -78 441 232 21 0 0 0 chr2 162529109 162529130 -88158724 + AT_rich Low_complexity Low_complexity 1 21 0 1754 146 25 11 chr2 162529192 162529473 -88158381 + AluJb SINE Alu 12 296 -16 1125 136 20 0 chr2 162531127 162531215 -88156639 + MER2 DNA MER2_type 2 87 -258 195 42 0 0 chr2 162531215 162531239 -88156615 + (TG)n Simple_repeat Simple_repeat 2 25 0 1125 136 20 0 chr2 162531239 162531348 -88156506 + MER2 DNA MER2_type 87 203 -142 247 203 68 0 chr2 162531377 162531436 -88156418 + MER2 DNA MER2_type 269 331 -14 275 279 265 34 chr2 162532881 162533028 -88154826 - MER5A DNA MER1_type 0 189 9 315 221 39 0 chr2 162533044 162533121 -88154733 + MER112 DNA MER1_type 1 80 -180 887 224 63 8 chr2 162533234 162533502 -88154352 + L1MD2 LINE L1 6074 6356 -3 2326 107 0 7 chr2 162533949 162534259 -88153595 - AluSx SINE Alu -4 308 1 207 0 0 0 chr2 162538325 162538348 -88149506 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1547 179 31 26 chr2 162540760 162541111 -88146743 - MLT1A1 LTR MaLR -11 354 2 6927 66 9 2 chr2 162541234 162542532 -88145322 - L1PA8 LINE L1 -13 6159 4857 2943 97 11 15 chr2 162542538 162543001 -88144853 + L1P LINE L1 4301 4761 -1385 180 275 25 62 chr2 162548492 162548572 -88139282 + L2 LINE L2 3188 3264 -8 947 174 50 0 chr2 162548621 162548782 -88139072 + FRAM SINE Alu 1 167 -9 244 243 129 0 chr2 162549228 162549298 -88138556 + MIR SINE MIR 73 151 -111 25 51 0 0 chr2 162549689 162549728 -88138126 + AT_rich Low_complexity Low_complexity 1 39 0 312 345 0 0 chr2 162550289 162550373 -88137481 + L2 LINE L2 3188 3271 -1 230 336 78 9 chr2 162550580 162550696 -88137158 + MIR SINE MIR 48 171 -91 863 141 0 0 chr2 162550765 162550886 -88136968 + FLAM_A SINE Alu 1 121 -12 241 192 91 111 chr2 162551069 162551168 -88136686 + MER5A DNA MER1_type 68 164 -25 544 206 10 0 chr2 162551221 162551318 -88136536 - MER5A DNA MER1_type 0 189 92 1484 124 7 4 chr2 162551318 162551583 -88136271 - THE1B LTR MaLR 0 375 1 570 148 0 0 chr2 162551583 162551671 -88136183 - MER5A DNA MER1_type -93 96 9 284 266 76 0 chr2 162551694 162551773 -88136081 + MER5A DNA MER1_type 12 96 -93 287 317 92 8 chr2 162551804 162551924 -88135930 + MER5A DNA MER1_type 40 169 -20 247 293 89 89 chr2 162551808 162551965 -88135889 - MER5A DNA MER1_type -32 157 1 * 736 272 59 35 chr2 162552414 162552825 -88135029 + MLT1G1 LTR MaLR 1 391 -199 549 235 197 0 chr2 162553102 162553234 -88134620 - MER5A DNA MER1_type -15 174 17 782 273 81 64 chr2 162553278 162553810 -88134044 - L1MC4 LINE L1 -150 7892 7352 1755 153 18 4 chr2 162553831 162554112 -88133742 - AluJb SINE Alu 0 312 28 463 284 135 0 chr2 162554148 162554370 -88133484 - MLT1L LTR MaLR -363 252 1 3258 76 20 31 chr2 162557179 162557637 -88130217 + MLT2A2 LTR ERVL 1 453 0 188 414 21 14 chr2 162558452 162558592 -88129262 - L2 LINE L2 -725 2589 2449 1653 187 0 23 chr2 162558593 162558893 -88128961 - AluJb SINE Alu -12 300 8 434 320 0 33 chr2 162558954 162559104 -88128750 - L2 LINE L2 -2 3311 3167 344 269 69 40 chr2 162559423 162559618 -88128236 + MIR3 SINE MIR 2 200 -62 480 264 84 22 chr2 162559675 162559853 -88128001 - LTR33 LTR ERVL 0 521 333 316 335 22 17 chr2 162559914 162560093 -88127761 - LTR33 LTR ERVL -297 224 45 275 246 18 97 chr2 162560112 162560226 -88127628 - MER5A DNA MER1_type 0 189 85 225 292 62 0 chr2 162560721 162560786 -88127068 + L2 LINE L2 3187 3255 -17 639 232 38 11 chr2 162561883 162562068 -88125786 - MLT1L LTR MaLR 0 615 426 1940 183 33 13 chr2 162562096 162562485 -88125369 - MLT2C1 LTR ERVL 0 397 1 437 237 59 30 chr2 162562513 162562648 -88125206 - MLT1L LTR MaLR -333 282 144 200 226 57 0 chr2 162562738 162562791 -88125063 + L2 LINE L2 3258 3313 0 2468 150 7 54 chr2 162564768 162564809 -88123045 - MSTB LTR MaLR 0 426 385 2025 122 17 3 chr2 162564809 162565133 -88122721 + AluSx SINE Alu 1 312 0 2468 150 7 54 chr2 162565133 162565537 -88122317 - MSTB LTR MaLR -41 385 2 2878 3 0 0 chr2 162565777 162566088 -88121766 - AluYa5 SINE Alu 0 311 1 328 216 21 0 chr2 162567826 162567923 -88119931 + GA-rich Low_complexity Low_complexity 1 99 0 242 333 102 27 chr2 162568553 162568741 -88119113 - MIR3 SINE MIR -64 198 3 22 35 0 0 chr2 162568791 162568820 -88119034 + AT_rich Low_complexity Low_complexity 1 29 0 267 233 167 33 chr2 162569254 162569344 -88118510 + MER5A DNA MER1_type 50 151 -38 195 338 14 28 chr2 162570551 162570622 -88117232 + MIR SINE MIR 24 93 -115 191 300 0 0 chr2 162570738 162570791 -88117063 + MIR SINE MIR 99 152 -56 709 204 20 26 chr2 162571026 162571178 -88116676 + MER20 DNA MER1_type 69 219 0 301 254 14 0 chr2 162571315 162571386 -88116468 + ERVL LTR ERVL 2182 2253 -3511 4271 319 79 55 chr2 162571534 162573333 -88114521 + ERVL LTR ERVL 942 2697 -3067 1911 118 57 0 chr2 162573333 162573612 -88114242 + AluSq SINE Alu 1 295 -18 4271 319 79 55 chr2 162573612 162574092 -88113762 + ERVL LTR ERVL 2697 3164 -2600 2418 93 3 6 chr2 162574092 162574404 -88113450 - AluSx SINE Alu 0 312 2 4271 319 79 55 chr2 162574404 162575953 -88111901 + ERVL LTR ERVL 3164 4995 -769 368 78 0 47 chr2 162575993 162576057 -88111797 + L1PA16 LINE L1 6106 6166 0 26 30 0 0 chr2 162576087 162576120 -88111734 + AT_rich Low_complexity Low_complexity 1 33 0 10134 28 1 2 chr2 162576144 162578123 -88109731 + L1PA3 LINE L1 4172 6152 -3 192 158 0 0 chr2 162578127 162578165 -88109689 + A-rich Low_complexity Low_complexity 1 38 0 1742 160 6 31 chr2 162578276 162578595 -88109259 - AluJo SINE Alu -1 311 1 290 255 41 76 chr2 162580074 162580219 -88107635 + L2 LINE L2 3123 3262 -51 300 208 101 77 chr2 162580394 162580562 -88107292 + L2 LINE L2 3073 3244 -69 862 258 105 62 chr2 162580627 162581111 -88106743 + L2 LINE L2 2809 3313 0 405 0 0 0 chr2 162581397 162581442 -88106412 + (CA)n Simple_repeat Simple_repeat 2 46 0 184 322 11 11 chr2 162581859 162581946 -88105908 - MIR3 SINE MIR -1 207 121 394 271 110 0 chr2 162582323 162582441 -88105413 - MIR SINE MIR -5 257 127 220 320 39 13 chr2 162585155 162585233 -88102621 - L3 LINE CR1 0 1577 1498 2370 103 3 0 chr2 162586529 162586839 -88101015 + AluSp SINE Alu 1 311 -2 894 189 0 19 chr2 162587527 162587686 -88100168 + FRAM SINE Alu 2 157 -9 1517 149 38 59 chr2 162587944 162588256 -88099598 + AluJo SINE Alu 1 306 0 579 276 96 7 chr2 162588260 162588561 -88099293 + L1M4 LINE L1 2235 2562 -3584 278 220 103 81 chr2 162588782 162588844 -88099010 + L1M4 LINE L1 2880 2939 -3207 601 158 139 0 chr2 162588844 162588966 -88098888 + FLAM_A SINE Alu 1 136 0 278 220 103 81 chr2 162588966 162589174 -88098680 + L1M4 LINE L1 2939 3158 -2988 181 277 84 12 chr2 162589206 162589289 -88098565 + L2 LINE L2 2529 2617 -697 1328 149 45 23 chr2 162589307 162589616 -88098238 - MER33 DNA MER1_type -3 321 6 381 315 212 20 chr2 162590413 162590616 -88097238 + MIR SINE MIR 16 257 -5 781 309 32 0 chr2 162591459 162591676 -88096178 - MIR SINE MIR -36 226 3 22 35 0 0 chr2 162593200 162593229 -88094625 + AT_rich Low_complexity Low_complexity 1 29 0 1688 173 3 14 chr2 162593547 162593842 -88094012 + AluJb SINE Alu 2 293 -19 1003 212 0 5 chr2 162595586 162595770 -88092084 - MER5A DNA MER1_type 0 189 7 403 311 67 6 chr2 162595812 162595992 -88091862 + MIR SINE MIR 72 262 0 2626 29 9 3 chr2 162596290 162596606 -88091248 + AluYb8 SINE Alu 1 318 0 237 324 52 35 chr2 162597689 162597856 -88089998 + MIR3 SINE MIR 3 172 -36 426 265 245 0 chr2 162597856 162598003 -88089851 - MER5A DNA MER1_type -3 186 4 1355 209 49 9 chr2 162598373 162598431 -88089423 + L1ME1 LINE L1 5143 5197 -1121 2228 98 7 0 chr2 162598431 162598716 -88089138 + AluSq SINE Alu 1 287 -26 1355 209 49 9 chr2 162598716 162599083 -88088771 + L1ME1 LINE L1 5197 5575 -743 663 222 104 14 chr2 162599063 162599275 -88088579 + L1ME1 LINE L1 5918 6148 -18 * 562 259 114 42 chr2 162599715 162600029 -88087825 + L1ME4a LINE L1 5327 5665 -456 329 224 68 48 chr2 162600478 162600625 -88087229 + L1ME4a LINE L1 5970 6119 -2 7279 46 50 0 chr2 162602205 162603353 -88084501 - L1PA7 LINE L1 0 6154 4985 398 305 0 0 chr2 162603559 162603664 -88084190 - MIR SINE MIR -112 150 46 24 67 0 0 chr2 162604420 162604465 -88083389 + AT_rich Low_complexity Low_complexity 1 45 0 205 49 0 49 chr2 162604827 162604868 -88082986 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 558 231 0 45 chr2 162605246 162605380 -88082474 + MIR3 SINE MIR 64 191 -17 511 203 15 58 chr2 162605688 162605952 -88081902 + MER34 LTR ERV1 306 542 0 192 77 0 0 chr2 162606354 162606380 -88081474 + (TATG)n Simple_repeat Simple_repeat 2 27 0 288 224 13 0 chr2 162606430 162606506 -88081348 - L1MD1 LINE L1 -11 6231 6155 2308 92 20 0 chr2 162606553 162606859 -88080995 - AluSp SINE Alu -1 312 1 303 214 41 0 chr2 162606987 162607085 -88080769 + L1MB4 LINE L1 6062 6163 -17 1175 272 100 46 chr2 162607126 162607796 -88080058 + L1MB5 LINE L1 54 759 -5783 528 232 0 0 chr2 162607810 162607905 -88079949 + FLAM_A SINE Alu 20 114 -28 477 0 0 0 chr2 162607907 162607960 -88079894 + (CA)n Simple_repeat Simple_repeat 2 54 0 1668 204 20 68 chr2 162607963 162608153 -88079701 + L1MB5 LINE L1 751 949 -5593 2451 113 39 53 chr2 162608153 162608587 -88079267 + MSTA LTR MaLR 1 428 0 1668 204 20 68 chr2 162608587 162608936 -88078918 + L1MB5 LINE L1 949 1264 -5278 * 4125 181 63 8 chr2 162608928 162610439 -88077415 + L1MB5 LINE L1 5059 6659 -13 356 297 128 87 chr2 162610525 162610592 -88077262 + L2 LINE L2 2809 2872 -400 2029 158 30 25 chr2 162610592 162610953 -88076901 + THE1B LTR MaLR 1 363 -1 356 297 128 87 chr2 162610953 162611323 -88076531 + L2 LINE L2 2872 3264 -8 274 297 33 43 chr2 162611604 162611783 -88076071 + MIR SINE MIR 30 204 -58 862 124 0 0 chr2 162613087 162613200 -88074654 + AluY SINE Alu 1 113 -198 4709 50 16 3 chr2 162613200 162614219 -88073635 - MER11A LTR ERVK -1 1265 1 1586 90 0 0 chr2 162614219 162614419 -88073435 + AluY SINE Alu 107 306 -5 1213 117 0 0 chr2 162614419 162614582 -88073272 + AluSg/x SINE Alu 134 296 -16 234 360 121 47 chr2 162614860 162615157 -88072697 + L2 LINE L2 2954 3272 0 460 272 65 71 chr2 162615687 162615941 -88071913 + LTR33 LTR ERVL 14 254 -269 337 325 10 62 chr2 162618232 162618426 -88069428 + MER5A DNA MER1_type 6 189 0 1858 168 3 20 chr2 162618504 162618807 -88069047 + AluSx SINE Alu 1 298 -14 349 293 10 10 chr2 162619258 162619357 -88068497 - MIR SINE MIR 0 262 164 2285 98 24 0 chr2 162619357 162619653 -88068201 - AluSp SINE Alu -10 303 1 304 196 0 0 chr2 162619707 162619758 -88068096 - MIR SINE MIR -93 169 119 197 300 40 0 chr2 162619804 162619854 -88068000 - L2 LINE L2 -11 3302 3251 * 601 255 21 7 chr2 162619827 162619972 -88067882 - MIR SINE MIR -94 168 22 980 77 0 0 chr2 162620084 162620214 -88067640 - L1PA3 LINE L1 -3 6152 6023 303 154 0 0 chr2 162620811 162620876 -88066978 + GA-rich Low_complexity Low_complexity 2 66 0 213 39 0 0 chr2 162620876 162620902 -88066952 + (TG)n Simple_repeat Simple_repeat 2 27 0 6667 122 37 57 chr2 162621426 162621735 -88066119 + Tigger3b DNA MER2_type 1 315 -2713 1726 159 25 0 chr2 162621735 162622018 -88065836 - AluJo SINE Alu -12 300 11 6667 122 37 57 chr2 162622018 162622333 -88065521 + Tigger3b DNA MER2_type 315 635 -2393 2144 96 0 27 chr2 162622333 162622625 -88065229 + AluY SINE Alu 21 304 -7 6667 122 37 57 chr2 162622625 162623254 -88064600 + Tigger3b DNA MER2_type 635 1229 -2 2151 141 0 3 chr2 162623732 162624044 -88063810 + AluSx SINE Alu 1 311 -1 34 0 0 0 chr2 162624081 162624115 -88063739 + AT_rich Low_complexity Low_complexity 1 34 0 30760 30 2 3 chr2 162624128 162628805 -88059049 - L1PA3 LINE L1 -2 6153 1480 10725 70 15 7 chr2 162628801 162630302 -88057552 + L1P LINE L1 9 1522 -4624 * 354 307 52 7 chr2 162630666 162630819 -88057035 - MIR SINE MIR -83 179 20 247 48 24 24 chr2 162631351 162631393 -88056461 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 267 297 36 29 chr2 162631611 162631749 -88056105 + MLT1H LTR MaLR 95 233 -316 22 56 0 0 chr2 162632670 162632706 -88055148 + AT_rich Low_complexity Low_complexity 1 36 0 435 262 73 29 chr2 162633424 162633481 -88054373 - MIR SINE MIR -6 256 203 2064 114 39 36 chr2 162633481 162633815 -88054039 - MER1B DNA MER1_type 0 337 3 435 262 73 29 chr2 162633815 162633972 -88053882 - MIR SINE MIR -59 203 36 4361 25 0 0 chr2 162634054 162634528 -88053326 - L1PA3 LINE L1 0 6155 5682 243 351 11 0 chr2 162634546 162634640 -88053214 + L3 LINE CR1 1280 1374 -203 4417 194 19 59 chr2 162634994 162635352 -88052502 + Charlie1a DNA MER1_type 14 385 -2376 2744 74 14 6 chr2 162635352 162635704 -88052150 + THE1A LTR MaLR 1 355 0 4417 194 19 59 chr2 162635704 162635774 -88052080 + Charlie1a DNA MER1_type 385 456 -2305 1756 178 11 0 chr2 162635774 162636061 -88051793 + AluJo SINE Alu 5 294 -18 4417 194 19 59 chr2 162636061 162636625 -88051229 + Charlie1a DNA MER1_type 456 967 -488 33783 96 12 57 chr2 162636638 162643082 -88044772 + L1PA7 LINE L1 12 6154 0 855 168 20 0 chr2 162643082 162643231 -88044623 + Charlie1a DNA MER1_type 958 1109 -346 646 214 80 5 chr2 162643342 162643529 -88044325 + L1M4 LINE L1 2666 2866 -3280 800 223 27 32 chr2 162643533 162643721 -88044133 - MSTD LTR MaLR 0 396 210 243 79 0 0 chr2 162643771 162643809 -88044045 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1624 277 13 14 chr2 162643812 162644365 -88043489 + L1M4 LINE L1 3171 3722 -2424 2258 211 55 0 chr2 162644401 162644860 -88042994 + MLT1D LTR MaLR 22 505 0 273 282 18 35 chr2 162646335 162646505 -88041349 + CT-rich Low_complexity Low_complexity 5 171 0 555 296 156 46 chr2 162647922 162648294 -88039560 + MLT2F LTR ERVL 250 662 -1 2525 61 3 13 chr2 162648362 162648672 -88039182 + AluY SINE Alu 1 307 -4 1800 182 14 17 chr2 162649152 162649514 -88038340 - MER74A LTR ERVL -197 361 1 265 183 141 0 chr2 162649958 162650029 -88037825 - L1MB2 LINE L1 0 6171 6091 201 287 117 0 chr2 162651486 162651580 -88036274 - MIR SINE MIR -81 181 77 943 205 5 20 chr2 162651717 162651917 -88035937 - LTR23-int LTR ERV1 -401 4722 4526 1003 289 68 32 chr2 162651921 162651989 -88035865 - Charlie7 DNA MER1_type -2126 486 422 2123 121 7 3 chr2 162651989 162652294 -88035560 - AluSx SINE Alu -6 306 1 1003 289 68 32 chr2 162652294 162652693 -88035161 - Charlie7 DNA MER1_type -2190 422 2 1193 176 22 57 chr2 162652712 162652939 -88034915 - MER20 DNA MER1_type 0 219 1 200 351 14 14 chr2 162653257 162653331 -88034523 + MIR SINE MIR 19 92 -170 1214 81 12 0 chr2 162653355 162653516 -88034338 - AluY SINE Alu -12 299 137 357 75 0 0 chr2 162653928 162653981 -88033873 + (TG)n Simple_repeat Simple_repeat 2 54 0 1265 106 56 0 chr2 162654694 162654874 -88032980 - AluSq SINE Alu -123 190 1 509 246 43 103 chr2 162654994 162655126 -88032728 + L1ME4a LINE L1 5582 5690 -431 791 271 110 64 chr2 162655126 162655624 -88032230 + LTR33A LTR ERVL 3 523 0 509 246 43 103 chr2 162655624 162655772 -88032082 + L1ME4a LINE L1 5690 5845 -276 455 257 128 6 chr2 162656246 162656300 -88031554 - MLT1K LTR MaLR -10 578 532 194 62 31 0 chr2 162656300 162656332 -88031522 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 455 257 128 6 chr2 162656332 162656456 -88031398 - MLT1K LTR MaLR -56 532 378 348 123 18 0 chr2 162657018 162657075 -88030779 - L1MB7 LINE L1 -16 6168 6111 458 289 88 102 chr2 162657252 162657625 -88030229 - MLT1I LTR MaLR 0 409 42 1444 179 153 7 chr2 162657673 162657974 -88029880 + MER7A DNA MER2_type 1 343 -3 246 141 47 62 chr2 162657995 162658059 -88029795 - MLT1J1 LTR MaLR 0 446 384 7877 141 25 18 chr2 162658434 162659804 -88028050 + MER61-int LTR ERV1 2173 5030 -187 313 247 79 36 chr2 162660181 162660309 -88027545 - L1MC/D LINE L1 -491 5630 5498 322 270 31 55 chr2 162661358 162661419 -88026435 + L1MC4a LINE L1 5733 5794 -2014 2373 191 109 27 chr2 162661419 162661943 -88025911 - MLT1F1 LTR MaLR 0 567 1 322 270 31 55 chr2 162661943 162662044 -88025810 + L1MC4a LINE L1 5794 5891 -1917 1704 126 98 25 chr2 162662302 162662654 -88025200 + MSTA LTR MaLR 5 411 -17 289 273 68 11 chr2 162662928 162663104 -88024750 + L1MEd LINE L1 706 891 -5228 378 343 29 0 chr2 162663876 162664016 -88023838 + MER69 DNA AcHobo 6 149 -2377 * 426 211 39 51 chr2 162664004 162664160 -88023694 + MER69 DNA AcHobo 1989 2142 -384 944 199 11 6 chr2 162664168 162664344 -88023510 + AluJo SINE Alu 13 189 -123 556 208 87 111 chr2 162664464 162664594 -88023260 - L1M2 LINE L1 -4225 2202 2070 1597 103 60 4 chr2 162664594 162664826 -88023028 - AluSx SINE Alu -18 294 50 556 208 87 111 chr2 162664826 162665040 -88022814 - L1M2 LINE L1 -4357 2070 1748 207 146 0 0 chr2 162665572 162665613 -88022241 + (TG)n Simple_repeat Simple_repeat 1 41 0 211 320 20 0 chr2 162666126 162666226 -88021628 + C-rich Low_complexity Low_complexity 6 107 0 443 295 120 32 chr2 162666513 162667180 -88020674 - L1MC4a LINE L1 -748 5398 5196 32 26 0 0 chr2 162667207 162667246 -88020608 + AT_rich Low_complexity Low_complexity 1 39 0 1430 200 163 0 chr2 162668419 162668714 -88019140 + MER57A LTR ERV1 15 357 -46 324 301 57 23 chr2 162668814 162668990 -88018864 - MLT1K-int LTR MaLR -882 489 308 1492 150 0 0 chr2 162668994 162669221 -88018633 - AluSg/x SINE Alu 0 312 86 230 136 0 23 chr2 162670138 162670182 -88017672 + L1MB8 LINE L1 6136 6178 0 2243 201 130 111 chr2 162670193 162670614 -88017240 + L1MC3 LINE L1 6675 7087 -698 298 266 0 43 chr2 162670614 162670708 -88017146 + MLT1F1 LTR MaLR 35 124 -443 2243 201 130 111 chr2 162670708 162671180 -88016674 + L1MC3 LINE L1 7087 7679 -106 298 193 70 0 chr2 162673617 162673674 -88014180 - L2 LINE L2 0 3272 3212 320 297 148 29 chr2 162673976 162674185 -88013669 - MLT1K LTR MaLR -20 568 335 234 330 160 19 chr2 162674458 162674670 -88013184 - L2 LINE L2 -218 3054 2813 2412 60 7 3 chr2 162674910 162675210 -88012644 + AluY SINE Alu 1 301 -10 285 299 108 91 chr2 162675974 162676205 -88011649 - L1MEd LINE L1 -5454 665 431 387 316 57 29 chr2 162676372 162676581 -88011273 - L1MEd LINE L1 -5829 290 76 643 117 0 36 chr2 162676787 162676898 -88010956 - L1PA15 LINE L1 0 6165 6059 1687 165 22 13 chr2 162676900 162677215 -88010639 - MER57B LTR ERV1 -3 431 114 1880 19 5 0 chr2 162677599 162677811 -88010043 - AluYa5 SINE Alu -6 305 93 330 284 60 49 chr2 162678929 162679112 -88008742 - MIR3 SINE MIR -7 201 17 1161 126 21 97 chr2 162679142 162679380 -88008474 + AluJo SINE Alu 2 221 -91 219 250 104 10 chr2 162680863 162680959 -88006895 + MIR SINE MIR 102 206 -56 1526 72 0 0 chr2 162680974 162681154 -88006700 + AluSc SINE Alu 1 180 -129 384 200 11 28 chr2 162681310 162681490 -88006364 + (TTG)n Simple_repeat Simple_repeat 3 179 0 716 157 0 8 chr2 162681610 162681744 -88006110 + CT-rich Low_complexity Low_complexity 1 133 0 1192 172 0 29 chr2 162681744 162681948 -88005906 - AluJo SINE Alu -33 279 82 209 227 0 0 chr2 162682367 162682411 -88005443 - L2 LINE L2 -2 3311 3268 6010 179 55 27 chr2 162682771 162684013 -88003841 - L1MC3 LINE L1 -274 7511 6236 21 0 0 0 chr2 162685108 162685129 -88002725 + AT_rich Low_complexity Low_complexity 1 21 0 1818 135 11 0 chr2 162686899 162687173 -88000681 + AluY SINE Alu 1 277 -34 1887 131 22 0 chr2 162687426 162687739 -88000115 + MER61-int LTR ERV1 4886 5205 -12 2946 42 0 0 chr2 162687744 162688098 -87999756 - L1PA4 LINE L1 0 6155 5802 3468 29 0 0 chr2 162688098 162688705 -87999149 + L1P2 LINE L1 5075 5681 -474 274 263 5 134 chr2 162688986 162689195 -87998659 - MER102b DNA MER1_type -3 338 157 503 130 10 0 chr2 162689195 162689295 -87998559 + (TTCC)n Simple_repeat Simple_repeat 2 102 0 210 203 27 14 chr2 162689285 162689333 -87998521 + CT-rich Low_complexity Low_complexity 2 53 -23 * 2239 136 0 0 chr2 162689333 162689643 -87998211 - AluSg SINE Alu 0 310 1 210 203 27 14 chr2 162689643 162689668 -87998186 + CT-rich Low_complexity Low_complexity 53 76 0 558 187 0 0 chr2 162689696 162689803 -87998051 + MLT2B2 LTR ERVL 409 515 0 2214 227 96 50 chr2 162689812 162690508 -87997346 - L1M4 LINE L1 -5543 999 272 1814 118 3 14 chr2 162690651 162690947 -87996907 - L1P LINE L1 -2187 3959 3667 4276 86 52 5 chr2 162690947 162691565 -87996289 + L1PA13 LINE L1 5512 6160 -3 797 254 47 14 chr2 162691569 162691988 -87995866 + L1MCa LINE L1 1750 2220 -4206 504 162 0 0 chr2 162692253 162692358 -87995496 - L1P4 LINE L1 -713 5452 5348 433 307 122 8 chr2 162692393 162692631 -87995223 - HAL1 LINE L1 -671 1836 1572 2362 232 87 41 chr2 162692643 162693556 -87994298 + L1MCc LINE L1 12 1315 -5107 476 275 0 14 chr2 162694675 162694817 -87993037 - MER117 DNA MER1_type -51 146 7 1172 199 146 12 chr2 162695044 162695366 -87992488 + MLT1A1 LTR MaLR 1 365 0 255 169 0 62 chr2 162695459 162695524 -87992330 - Alu SINE Alu 0 300 240 650 277 62 32 chr2 162695928 162696170 -87991684 - MIR SINE MIR -6 256 10 1144 227 123 54 chr2 162696882 162697344 -87990510 - MLT1D LTR MaLR -9 496 3 236 263 12 25 chr2 162697713 162697793 -87990061 + MLT1J2 LTR MaLR 58 136 -314 537 273 52 47 chr2 162698525 162698910 -87988944 - L1ME LINE L1 -477 5644 5258 23 68 0 0 chr2 162699700 162699744 -87988110 + AT_rich Low_complexity Low_complexity 1 44 0 374 318 62 31 chr2 162699902 162700094 -87987760 - L1ME LINE L1 -1999 4147 3950 942 151 6 73 chr2 162700925 162701104 -87986750 + AluJb SINE Alu 134 300 -12 22 0 0 0 chr2 162701158 162701180 -87986674 + AT_rich Low_complexity Low_complexity 1 22 0 2326 105 0 3 chr2 162701247 162701560 -87986294 + AluSx SINE Alu 1 312 0 1564 138 15 4 chr2 162701945 162702206 -87985648 + AluY SINE Alu 1 264 -47 378 341 157 45 chr2 162702548 162703423 -87984431 - L2 LINE L2 -180 3092 2136 406 301 100 50 chr2 162703875 162704134 -87983720 + HAL1b LINE L1 303 574 -774 240 297 129 66 chr2 162705154 162705440 -87982414 + L2 LINE L2 3008 3311 -2 2326 103 0 0 chr2 162705549 162705850 -87982004 + AluSx SINE Alu 1 301 -11 1046 192 74 3 chr2 162706258 162706678 -87981176 + MLT1D LTR MaLR 2 497 -8 307 270 98 76 chr2 162707553 162707750 -87980104 - MIR SINE MIR -21 187 14 325 311 43 6 chr2 162708167 162708328 -87979526 - L1ME LINE L1 -648 5522 5356 392 294 156 20 chr2 162708331 162708722 -87979132 - L1ME LINE L1 -843 5303 4860 189 0 0 0 chr2 162709187 162709208 -87978646 + (A)n Simple_repeat Simple_repeat 1 21 0 491 101 13 13 chr2 162709579 162709658 -87978196 + MADE1 DNA Mariner 2 80 0 380 170 40 90 chr2 162709691 162709791 -87978063 + MLT1E2 LTR MaLR 1 95 -531 1456 133 58 94 chr2 162709913 162710273 -87977581 - THE1C LTR MaLR -27 348 2 1945 137 11 0 chr2 162711046 162711331 -87976523 - AluSp SINE Alu -16 297 10 2220 96 10 0 chr2 162712460 162712753 -87975101 + AluSg SINE Alu 1 296 -14 2060 143 21 19 chr2 162712838 162713210 -87974644 - THE1C LTR MaLR -2 373 1 889 152 8 0 chr2 162713395 162713527 -87974327 - AluJb SINE Alu -21 291 159 1626 142 9 72 chr2 162714671 162715017 -87972837 - MER33 DNA MER1_type 0 324 1 1758 170 27 3 chr2 162715495 162715830 -87972024 + L1MB5 LINE L1 5801 6143 -31 1912 164 3 3 chr2 162715840 162716151 -87971703 - AluJb SINE Alu -1 311 1 726 267 23 1 chr2 162716397 162716590 -87971264 - MLT1H LTR MaLR -336 213 36 202 277 0 0 chr2 162716630 162716677 -87971177 + L2 LINE L2 3226 3272 0 818 222 45 0 chr2 162717009 162717185 -87970669 + MER63A DNA MER1_type 27 210 0 278 404 44 0 chr2 162717302 162717416 -87970438 - L2 LINE L2 -1 3271 3153 1270 58 26 0 chr2 162717497 162717688 -87970166 - L1P3 LINE L1 -705 5449 5254 22 99 0 0 chr2 162718333 162718404 -87969450 + AT_rich Low_complexity Low_complexity 1 71 0 304 290 48 32 chr2 162719519 162719643 -87968211 - L3 LINE CR1 -9 1568 1443 842 156 70 5 chr2 162720017 162720216 -87967638 - Charlie1 DNA MER1_type 0 2761 2550 196 273 0 36 chr2 162722217 162722272 -87965582 + MIR SINE MIR 82 134 -128 219 290 65 32 chr2 162722312 162722405 -87965449 - MER5B DNA MER1_type 0 178 83 344 227 78 91 chr2 162723094 162723248 -87964606 - MIR SINE MIR -50 212 61 359 21 21 0 chr2 162723343 162723391 -87964463 + (CA)n Simple_repeat Simple_repeat 1 49 0 576 186 5 0 chr2 162723812 162724050 -87963804 + ACRO1 Satellite acromeric 1 239 -56 1313 126 19 24 chr2 162724575 162724781 -87963073 + AluSg/x SINE Alu 104 308 -2 21 82 0 0 chr2 162725303 162725352 -87962502 + AT_rich Low_complexity Low_complexity 1 49 0 1106 285 92 27 chr2 162725550 162725717 -87962137 + LTR33 LTR ERVL 1 156 -365 1376 116 74 5 chr2 162725717 162725932 -87961922 + MER30 DNA MER1_type 1 230 0 1106 285 92 27 chr2 162725932 162726251 -87961603 + LTR33 LTR ERVL 156 519 -2 296 167 28 14 chr2 162726342 162726414 -87961440 - MLT1I LTR MaLR -11 398 326 815 229 6 0 chr2 162726414 162726571 -87961283 + FRAM SINE Alu 1 154 -22 881 168 7 0 chr2 162726571 162726720 -87961134 + Tigger2 DNA MER2_type 2546 2695 -23 234 240 0 60 chr2 162726966 162727066 -87960788 + A-rich Low_complexity Low_complexity 1 94 0 296 273 45 0 chr2 162727071 162727181 -87960673 + HAL1 LINE L1 1530 1644 -863 2212 107 3 0 chr2 162727342 162727641 -87960213 + AluSc SINE Alu 1 300 -9 1389 147 0 77 chr2 162727830 162728089 -87959765 + AluJo SINE Alu 44 282 -30 7027 122 34 0 chr2 162728105 162729228 -87958626 + L1P LINE L1 1 1161 -4985 2019 119 3 7 chr2 162729694 162730003 -87957851 + AluSx SINE Alu 1 308 0 2309 110 15 44 chr2 162730159 162730568 -87957286 - L1MA8 LINE L1 -275 6016 5620 391 280 121 34 chr2 162731368 162731575 -87956279 - L1M2 LINE L1 -5958 891 667 1072 202 29 83 chr2 162731644 162731813 -87956041 - L1M4 LINE L1 -848 5298 5121 2077 106 6 13 chr2 162731813 162732125 -87955729 + AluY SINE Alu 1 310 -1 1072 202 29 83 chr2 162732125 162732375 -87955479 - L1M4 LINE L1 -1025 5121 4902 1106 197 52 21 chr2 162732383 162732672 -87955182 - L1M4 LINE L1 -1976 4170 3873 788 73 9 0 chr2 162733114 162733224 -87954630 + L1PA5 LINE L1 6038 6148 -6 23 0 0 0 chr2 162733226 162733249 -87954605 + AT_rich Low_complexity Low_complexity 1 23 0 277 188 116 0 chr2 162733341 162733410 -87954444 - MIR SINE MIR -49 213 137 2423 181 17 13 chr2 162733488 162733947 -87953907 + Tigger7 DNA MER2_type 57 517 -1970 407 148 114 34 chr2 162733963 162734051 -87953803 + Tigger7 DNA MER2_type 2397 2491 0 337 292 127 60 chr2 162734298 162734331 -87953523 + L1M4 LINE L1 4817 4846 -1300 2194 110 3 10 chr2 162734331 162734639 -87953215 - AluSg SINE Alu -4 306 1 337 292 127 60 chr2 162734639 162734889 -87952965 + L1M4 LINE L1 4846 5119 -1027 2100 86 14 4 chr2 162735289 162735587 -87952267 - AluSx SINE Alu 0 301 1 704 164 16 8 chr2 162736050 162736178 -87951676 - FLAM_A SINE Alu -2 140 12 2259 97 7 0 chr2 162736833 162737132 -87950722 + AluSg SINE Alu 2 302 -8 2007 132 3 14 chr2 162737132 162737420 -87950434 + AluSp SINE Alu 1 285 -28 24 32 0 0 chr2 162737420 162737451 -87950403 + AT_rich Low_complexity Low_complexity 1 31 0 266 226 38 0 chr2 162737559 162737612 -87950242 - MIR SINE MIR -116 146 92 739 110 55 55 chr2 162737816 162737943 -87949911 - FLAM_C SINE Alu -3 130 4 883 211 29 10 chr2 162738368 162738572 -87949282 + MER3 DNA MER1_type 2 209 0 473 306 37 33 chr2 162738587 162738832 -87949022 - L1MC4a LINE L1 -1945 5863 5618 218 380 87 0 chr2 162738873 162738965 -87948889 + MIR SINE MIR 46 145 -63 364 228 228 21 chr2 162739346 162739491 -87948363 + Tigger8 DNA MER2_type 148 322 -344 2256 102 0 0 chr2 162739636 162739955 -87947899 - AluSx SINE Alu 0 319 1 254 313 17 43 chr2 162740239 162740354 -87947500 - MIR SINE MIR -143 119 8 1943 167 0 0 chr2 162741602 162741901 -87945953 + AluSx SINE Alu 1 299 -13 22 56 0 0 chr2 162742436 162742472 -87945382 + AT_rich Low_complexity Low_complexity 1 36 0 2103 113 0 20 chr2 162742633 162742935 -87944919 - AluSx SINE Alu -16 296 1 431 281 16 39 chr2 162743034 162743187 -87944667 - MER5A DNA MER1_type -1 188 29 25 31 0 0 chr2 162743355 162743387 -87944467 + AT_rich Low_complexity Low_complexity 1 32 0 32 0 0 0 chr2 162743728 162743760 -87944094 + GC_rich Low_complexity Low_complexity 1 32 0 1073 269 99 19 chr2 162743905 162744059 -87943795 + MLT1E2 LTR MaLR 289 429 -197 2183 125 33 25 chr2 162744059 162744420 -87943434 - THE1B LTR MaLR 0 364 1 1073 269 99 19 chr2 162744420 162744577 -87943277 + MLT1E2 LTR MaLR 429 625 -1 1032 202 20 134 chr2 162744669 162745103 -87942751 + L1MDa LINE L1 889 1270 -5270 237 65 0 0 chr2 162745103 162745134 -87942720 + (TA)n Simple_repeat Simple_repeat 2 32 0 1032 202 20 134 chr2 162745134 162745154 -87942700 + L1MDa LINE L1 1270 1291 -5249 743 114 18 0 chr2 162745153 162745267 -87942587 + L1PA3 LINE L1 1 116 -6030 * 4124 66 0 7 chr2 162745249 162745785 -87942069 + L1PA3 LINE L1 1094 1627 -4519 15173 31 0 0 chr2 162745785 162748390 -87939464 + L1PA3 LINE L1 3553 6155 0 1623 220 136 0 chr2 162748390 162748955 -87938899 + L1M1 LINE L1 3508 4160 -3405 1042 150 12 95 chr2 162748952 162749063 -87938791 + L1MC2 LINE L1 6113 6193 -151 * 1590 199 14 3 chr2 162749063 162749360 -87938494 + AluJo SINE Alu 1 300 -12 1042 150 12 95 chr2 162749360 162749501 -87938353 + L1MC2 LINE L1 6193 6344 0 363 179 15 0 chr2 162749498 162749565 -87938289 + L1MC4 LINE L1 6935 7002 -1040 * 1099 216 48 11 chr2 162749608 162749947 -87937907 - L1ME2 LINE L1 -167 5999 5654 405 217 47 0 chr2 162750033 162750139 -87937715 + L1MC5 LINE L1 7001 7111 -850 308 312 124 26 chr2 162750165 162750511 -87937343 + L1MC4 LINE L1 7095 7474 -568 * 357 266 105 61 chr2 162750480 162750871 -87936983 + L1MC5 LINE L1 7270 7677 -284 913 282 98 14 chr2 162750902 162751605 -87936249 + L1ME LINE L1 4759 5525 -639 2329 37 0 4 chr2 162751605 162751874 -87935980 - AluY SINE Alu -15 296 29 2582 29 0 10 chr2 162763776 162764090 -87923764 + L1PA3 LINE L1 5842 6152 -3 2995 41 3 3 chr2 162764100 162764511 -87923343 + L1PA5 LINE L1 5770 6180 0 2110 130 5 46 chr2 162766450 162766820 -87921034 + L1MA9 LINE L1 5680 6034 -278 21 57 0 0 chr2 162767076 162767111 -87920743 + AT_rich Low_complexity Low_complexity 1 35 0 24 91 0 0 chr2 162768087 162768153 -87919701 + AT_rich Low_complexity Low_complexity 1 66 0 2157 109 26 3 chr2 162768780 162769127 -87918727 - L1MA2 LINE L1 0 6304 5950 6417 83 32 0 chr2 162769425 162770378 -87917476 - L1PA10 LINE L1 0 6168 5209 4368 106 49 18 chr2 162770767 162771483 -87916371 - Tigger3(Golem) DNA MER2_type -7 3022 2285 658 207 0 8 chr2 162771469 162771590 -87916264 - Tigger3(Golem) DNA MER2_type -2907 122 3 * 250 358 91 29 chr2 162772058 162772301 -87915553 - L3b LINE CR1 -9 1574 1317 1932 120 73 25 chr2 162772412 162772770 -87915084 - THE1C LTR MaLR 0 375 1 25 0 0 0 chr2 162772959 162772984 -87914870 + AT_rich Low_complexity Low_complexity 1 25 0 312 257 83 49 chr2 162773015 162773159 -87914695 - L1ME4a LINE L1 -48 6073 5925 1834 110 44 4 chr2 162773223 162773495 -87914359 + AluSx SINE Alu 1 283 -29 236 319 40 53 chr2 162773601 162773827 -87914027 - L1ME4a LINE L1 -428 5693 5471 23 86 0 0 chr2 162773827 162773885 -87913969 + AT_rich Low_complexity Low_complexity 1 58 0 254 295 134 18 chr2 162774190 162774302 -87913552 + L2 LINE L2 3067 3191 -81 702 304 57 22 chr2 162774459 162774560 -87913294 + MIR SINE MIR 17 113 -149 1959 133 0 7 chr2 162774560 162774881 -87912973 - AluSx SINE Alu 0 329 11 702 304 57 22 chr2 162774881 162775008 -87912846 + MIR SINE MIR 113 254 -8 575 198 33 8 chr2 162775513 162775634 -87912220 - MIR SINE MIR -71 191 68 2437 189 2 4 chr2 162775884 162776355 -87911499 + L1MB3 LINE L1 5714 6183 0 337 250 210 8 chr2 162776874 162776998 -87910856 - L2 LINE L2 0 3313 3165 232 286 40 40 chr2 162777059 162777185 -87910669 + MLT1G1 LTR MaLR 1 126 -467 36 94 0 0 chr2 162777198 162777304 -87910550 + AT_rich Low_complexity Low_complexity 1 106 0 238 247 14 41 chr2 162777365 162777438 -87910416 + MLT1G1 LTR MaLR 205 275 -280 359 236 114 10 chr2 162777523 162777676 -87910178 + MLT1G1 LTR MaLR 382 595 0 298 259 129 14 chr2 162777914 162778061 -87909793 + MER103 DNA DNA 1 164 -2 278 303 115 0 chr2 162778774 162778896 -87908958 + MIR3 SINE MIR 73 208 0 465 147 32 0 chr2 162779430 162779525 -87908329 + L1MA9 LINE L1 6215 6312 0 262 406 19 45 chr2 162779964 162780119 -87907735 - L2 LINE L2 -95 3177 3027 306 0 0 0 chr2 162780494 162780528 -87907326 + (CA)n Simple_repeat Simple_repeat 2 35 0 320 333 23 30 chr2 162780750 162780882 -87906972 + L2 LINE L2 3137 3267 -5 2536 241 38 13 chr2 162781040 162781755 -87906099 + L1ME3 LINE L1 5437 6331 -3 665 299 34 10 chr2 162782376 162782583 -87905271 + MIR SINE MIR 41 252 -10 5772 157 18 12 chr2 162782904 162783354 -87904500 + L1M1 LINE L1 4246 4692 -1519 210 37 0 0 chr2 162783354 162783381 -87904473 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5772 157 18 12 chr2 162783381 162784146 -87903708 + L1M1 LINE L1 4692 5466 -745 326 235 59 0 chr2 162784313 162784398 -87903456 + L1MC4 LINE L1 6614 6703 -1339 216 0 0 0 chr2 162784398 162784422 -87903432 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 393 75 0 0 chr2 162784421 162784474 -87903380 + (TA)n Simple_repeat Simple_repeat 2 54 0 6142 230 24 8 chr2 162785378 162786708 -87901146 - ERVL LTR ERVL -3578 2186 835 30 45 0 0 chr2 162787173 162787217 -87900637 + AT_rich Low_complexity Low_complexity 1 44 0 362 282 174 46 chr2 162788471 162788666 -87899188 - L2 LINE L2 -5 3267 3048 746 302 69 8 chr2 162788731 162788976 -87898878 + MIR SINE MIR 3 262 0 876 227 50 38 chr2 162790263 162790597 -87897257 - MSTD LTR MaLR -8 388 19 573 143 0 0 chr2 162791516 162791607 -87896247 - MER53 DNA DNA -4 185 95 652 307 34 84 chr2 162791676 162792116 -87895738 + LTR16A LTR ERVL 31 448 -2 1672 275 129 24 chr2 162792117 162792753 -87895101 + HERV16 LTR ERVL 2095 2797 -2199 4090 164 56 7 chr2 162793472 162794076 -87893778 - L1MB2 LINE L1 -57 6817 6166 324 0 0 0 chr2 162794076 162794112 -87893742 + (TG)n Simple_repeat Simple_repeat 2 37 0 4090 164 56 7 chr2 162794112 162794273 -87893581 - L1MB2 LINE L1 -708 6166 6014 76 12 0 0 chr2 162794304 162794387 -87893467 + AT_rich Low_complexity Low_complexity 1 83 0 1277 245 6 21 chr2 162794507 162794758 -87893096 - L1MB2 LINE L1 -849 6000 5754 2068 137 30 35 chr2 162794758 162795124 -87892730 - THE1B LTR MaLR 0 364 1 1277 245 6 21 chr2 162795124 162795211 -87892643 - L1MB2 LINE L1 -1095 5754 5667 2428 153 52 27 chr2 162796231 162796677 -87891177 - MSTB2 LTR MaLR 0 457 1 21 36 0 0 chr2 162798021 162798049 -87889805 + AT_rich Low_complexity Low_complexity 1 28 0 588 280 30 0 chr2 162798050 162798218 -87889636 + Cheshire DNA MER1_type 750 922 -1498 6761 240 70 23 chr2 162798226 162802397 -87885457 + L1M3d LINE L1 1 3981 -1989 2108 245 31 10 chr2 162802400 162803095 -87884759 - L1MB2 LINE L1 -3439 3410 2710 569 252 13 7 chr2 162803170 162803321 -87884533 - L1PBb LINE L1 -3988 2215 2064 4697 228 22 49 chr2 162803396 162804871 -87882983 - L1PBb LINE L1 -3988 2215 690 298 326 0 0 chr2 162804856 162804948 -87882906 - L1PA15-16 LINE L1 -5285 1564 1473 * 827 188 44 12 chr2 162805933 162806093 -87881761 - MER7C DNA MER2_type -437 165 1 571 265 22 0 chr2 162806345 162806481 -87881373 - MIR SINE MIR -75 187 49 6011 102 6 2 chr2 162807203 162808053 -87879801 + L1PA11 LINE L1 5322 6174 0 29 78 0 0 chr2 162809304 162809368 -87878486 + AT_rich Low_complexity Low_complexity 1 64 0 1652 156 32 24 chr2 162809559 162809899 -87877955 - L1MA8 LINE L1 -3 6288 5946 248 266 101 0 chr2 162810610 162810689 -87877165 - MIR SINE MIR -82 180 94 696 169 17 96 chr2 162810690 162810867 -87876987 + L1MA10 LINE L1 6047 6209 -125 614 298 6 6 chr2 162811159 162811317 -87876537 + MER63A DNA MER1_type 53 210 0 268 200 40 0 chr2 162811666 162811716 -87876138 - L2 LINE L2 0 3272 3221 1300 195 62 4 chr2 162811788 162811939 -87875915 - L1MA10 LINE L1 -1 6333 6192 246 81 0 0 chr2 162811939 162811976 -87875878 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1300 195 62 4 chr2 162811976 162812096 -87875758 - L1MA10 LINE L1 -142 6192 6046 467 290 52 0 chr2 162812096 162812251 -87875603 + MIR SINE MIR 94 256 -6 23 0 0 0 chr2 162812561 162812584 -87875270 + AT_rich Low_complexity Low_complexity 1 23 0 984 252 134 42 chr2 162812599 162813063 -87874791 - MLT1H LTR MaLR -2 547 1 22 70 0 0 chr2 162813616 162813659 -87874195 + AT_rich Low_complexity Low_complexity 1 43 0 217 375 86 8 chr2 162813761 162813889 -87873965 + L2 LINE L2 2925 3062 -210 22 35 0 0 chr2 162815046 162815075 -87872779 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr2 162815742 162815774 -87872080 + AT_rich Low_complexity Low_complexity 1 32 0 265 259 12 62 chr2 162816133 162816214 -87871640 - MIR SINE MIR -6 256 180 250 202 48 24 chr2 162816240 162816324 -87871530 + LTR68 LTR ERV1 4 89 -651 412 292 35 0 chr2 162816897 162817010 -87870844 - L2 LINE L2 0 3313 3197 937 261 172 20 chr2 162817021 162817370 -87870484 - L2 LINE L2 -2451 863 462 1973 126 20 27 chr2 162818132 162818433 -87869421 - AluSx SINE Alu -13 299 1 779 259 58 4 chr2 162818483 162818726 -87869128 + MER112 DNA MER1_type 1 256 0 1699 268 30 8 chr2 162819330 162819837 -87868017 - L1MC4a LINE L1 -1738 6070 5553 1064 260 111 77 chr2 162819915 162820419 -87867435 + LTR33 LTR ERVL 1 521 0 304 288 12 22 chr2 162822580 162822744 -87865110 + MIR SINE MIR 34 262 0 22 0 0 0 chr2 162822745 162822767 -87865087 + AT_rich Low_complexity Low_complexity 1 22 0 218 149 43 0 chr2 162822799 162822846 -87865008 + (TG)n Simple_repeat Simple_repeat 2 50 0 263 193 0 0 chr2 162822862 162822919 -87864935 - L1P5 LINE L1 -361 5795 5739 223 345 58 11 chr2 162823066 162823153 -87864701 - L2 LINE L2 -218 3054 2964 638 278 135 27 chr2 162823385 162823894 -87863960 + L1MEd LINE L1 929 1598 -892 1051 174 0 48 chr2 162823906 162824136 -87863718 + L1MA9 LINE L1 5165 5383 -763 2584 128 22 14 chr2 162824136 162824580 -87863274 + L1MA9 LINE L1 5864 6312 0 2380 55 0 3 chr2 162827742 162828035 -87859819 - AluY SINE Alu -19 292 1 305 275 125 0 chr2 162830153 162830273 -87857581 + MIR SINE MIR 118 252 -10 313 200 46 0 chr2 162830710 162830775 -87857079 - MLT1L LTR MaLR -409 206 139 1534 220 15 0 chr2 162830808 162831135 -87856719 - MER58B DNA MER1_type 0 341 10 261 157 0 20 chr2 162831225 162831276 -87856578 + L3 LINE CR1 1527 1576 -1 2507 46 0 0 chr2 162832061 162832366 -87855488 + AluY SINE Alu 6 310 -1 1585 125 0 4 chr2 162832442 162832674 -87855180 + AluSc SINE Alu 77 307 -2 759 160 8 0 chr2 162833944 162834063 -87853791 + FLAM_C SINE Alu 1 120 -13 24 0 0 0 chr2 162834078 162834102 -87853752 + AT_rich Low_complexity Low_complexity 1 24 0 210 319 14 14 chr2 162835085 162835154 -87852700 + MIR SINE MIR 89 157 -105 383 0 21 0 chr2 162835552 162835599 -87852255 + (TG)n Simple_repeat Simple_repeat 2 49 0 189 292 108 0 chr2 162835864 162835929 -87851925 + MIR SINE MIR 117 188 -74 281 346 143 8 chr2 162836582 162836715 -87851139 + MIR3 SINE MIR 31 181 -27 773 282 37 60 chr2 162838407 162838787 -87849067 + MLT1I LTR MaLR 39 409 0 21 36 0 0 chr2 162838847 162838875 -87848979 + AT_rich Low_complexity Low_complexity 1 28 0 246 333 25 0 chr2 162839024 162839105 -87848749 + MIR SINE MIR 66 148 -60 * 257 252 50 122 chr2 162839099 162839238 -87848616 - MIR SINE MIR -129 133 5 1019 209 9 5 chr2 162839859 162840069 -87847785 + AluJo SINE Alu 91 301 -11 21 36 0 0 chr2 162840290 162840318 -87847536 + AT_rich Low_complexity Low_complexity 1 28 0 12422 206 21 61 chr2 162840421 162841541 -87846313 + L1PA15 LINE L1 2325 3488 -2677 1647 183 11 7 chr2 162841541 162841849 -87846005 - AluSx SINE Alu 0 309 1 12422 206 21 61 chr2 162841849 162844625 -87843229 + L1PA15 LINE L1 3488 6165 0 268 24 24 24 chr2 162844652 162844694 -87843160 + (TG)n Simple_repeat Simple_repeat 1 42 0 1594 168 3 37 chr2 162844717 162845015 -87842839 - AluJb SINE Alu -24 288 1 4490 199 30 11 chr2 162845019 162846337 -87841517 - L1MD2 LINE L1 -229 6130 4789 193 318 15 0 chr2 162848697 162848763 -87839091 + MIR SINE MIR 37 103 -159 1053 266 87 46 chr2 162849462 162850132 -87837722 + L1MC4a LINE L1 5318 6015 -106 216 280 27 13 chr2 162850430 162850505 -87837349 + L3 LINE CR1 926 1001 -576 1940 129 0 0 chr2 162850592 162850871 -87836983 + AluSx SINE Alu 5 283 -29 207 0 0 0 chr2 162850874 162850897 -87836957 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 294 298 8 24 chr2 162850926 162851050 -87836804 + L2 LINE L2 2938 3059 -213 201 338 0 15 chr2 162851140 162851208 -87836646 + MER5A DNA MER1_type 117 183 -6 302 305 109 23 chr2 162851293 162851421 -87836433 + L2 LINE L2 3175 3313 0 24 96 0 0 chr2 162852383 162852456 -87835398 + AT_rich Low_complexity Low_complexity 1 73 0 3782 227 45 36 chr2 162852610 162853862 -87833992 - L1ME1 LINE L1 -132 6314 5040 1623 204 31 14 chr2 162853862 162854220 -87833634 - MLT1A1 LTR MaLR 0 365 2 3782 227 45 36 chr2 162854220 162854965 -87832889 - L1ME1 LINE L1 -1406 5040 4303 745 214 107 104 chr2 162854959 162855320 -87832534 - L1ME1 LINE L1 -4584 1842 1483 * 967 52 13 26 chr2 162855320 162855474 -87832380 + (TTTC)n Simple_repeat Simple_repeat 1 152 0 2041 104 0 0 chr2 162855475 162855735 -87832119 - AluSx SINE Alu -44 268 9 745 214 107 104 chr2 162855735 162855807 -87832047 - L1ME1 LINE L1 -4942 1484 1261 779 257 30 41 chr2 162855843 162856190 -87831664 - HERVL40 LTR ERVL 0 5530 2783 286 280 28 28 chr2 162856164 162856271 -87831583 - HERVL40 LTR ERVL -349 4674 4568 * 2200 114 0 3 chr2 162856622 162856919 -87830935 + AluSg SINE Alu 1 296 -14 369 0 0 0 chr2 162857257 162857298 -87830556 + (TG)n Simple_repeat Simple_repeat 2 42 0 3314 253 22 10 chr2 162857537 162858342 -87829512 - HERVL40 LTR ERVL -987 4543 3729 979 309 14 14 chr2 162858359 162858650 -87829204 - HERVL40 LTR ERVL -4676 854 564 991 255 78 93 chr2 162858653 162858914 -87828940 - HERVL40 LTR ERVL -4927 603 340 2346 50 0 27 chr2 162858914 162859247 -87828607 + AluY SINE Alu 1 311 0 991 255 78 93 chr2 162859247 162859597 -87828257 - HERVL40 LTR ERVL -5190 340 1 1789 231 92 12 chr2 162859598 162860079 -87827775 - LTR40a LTR ERVL 0 519 1 320 249 104 23 chr2 162860346 162860519 -87827335 + L1M4 LINE L1 4317 4503 -1643 373 324 93 55 chr2 162860807 162861246 -87826608 + L2 LINE L2 2825 3280 -33 2208 121 30 30 chr2 162861895 162862259 -87825595 + THE1B LTR MaLR 1 364 0 402 21 0 0 chr2 162863145 162863192 -87824662 + (TA)n Simple_repeat Simple_repeat 1 47 0 337 198 27 18 chr2 162863365 162863476 -87824378 + (TA)n Simple_repeat Simple_repeat 1 112 0 2344 40 7 13 chr2 162864095 162864394 -87823460 + AluY SINE Alu 1 297 -14 256 346 93 45 chr2 162864492 162864847 -87823007 - L2 LINE L2 -876 2438 2067 315 318 27 34 chr2 162864863 162865011 -87822843 - L2 LINE L2 0 3313 3167 9142 144 49 4 chr2 162866706 162868210 -87819644 - Tigger2 DNA MER2_type 0 2718 1147 3794 152 12 15 chr2 162868287 162868945 -87818909 - Tigger2 DNA MER2_type -1968 750 95 625 236 90 57 chr2 162869884 162870096 -87817758 + MIR SINE MIR 8 226 -36 310 303 19 74 chr2 162870124 162870286 -87817568 - MIR SINE MIR -59 203 51 1179 147 71 4 chr2 162870304 162870529 -87817325 - L1PA16 LINE L1 -11 6155 5916 413 283 42 103 chr2 162870852 162871163 -87816691 + MLT1I LTR MaLR 116 407 -2 267 309 27 13 chr2 162871186 162871335 -87816519 - L1ME LINE L1 -283 5838 5688 2171 101 3 3 chr2 162871503 162871800 -87816054 + AluSg SINE Alu 1 297 -13 240 325 41 41 chr2 162872058 162872181 -87815673 - MIR3 SINE MIR -5 203 81 1700 152 7 47 chr2 162873370 162873716 -87814138 + AluSx SINE Alu 1 334 0 204 40 0 0 chr2 162873926 162873951 -87813903 + (CTA)n Simple_repeat Simple_repeat 1 25 0 579 267 15 8 chr2 162874007 162874138 -87813716 - MIR SINE MIR -111 151 20 1024 142 64 0 chr2 162874528 162874732 -87813122 - L1MA8 LINE L1 -3 6288 6072 1764 169 103 20 chr2 162874733 162875117 -87812737 - L1MA8 LINE L1 -286 6014 5599 25 31 0 0 chr2 162875294 162875326 -87812528 + AT_rich Low_complexity Low_complexity 1 32 0 272 131 33 82 chr2 162875907 162875968 -87811886 + L1MA9 LINE L1 175 232 -6081 12427 203 43 24 chr2 162876067 162879099 -87808755 + L1MA9 LINE L1 2121 5268 -1280 324 0 0 0 chr2 162879099 162879135 -87808719 + (CA)n Simple_repeat Simple_repeat 1 36 0 12427 203 43 24 chr2 162879135 162879867 -87807987 + L1MA9 LINE L1 5268 5984 -564 15719 181 115 9 chr2 162879928 162883032 -87804822 + L1 LINE L1 12 3443 -4122 2830 197 19 13 chr2 162883025 162883649 -87804205 + L1 LINE L1 5157 5784 -1781 * 2260 145 3 3 chr2 162883762 162884120 -87803734 - L1PB4 LINE L1 -274 5882 5525 1985 137 17 0 chr2 162884165 162884464 -87803390 + AluSx SINE Alu 1 304 -8 29 0 0 0 chr2 162885113 162885142 -87802712 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 162885493 162885515 -87802339 + AT_rich Low_complexity Low_complexity 1 22 0 450 283 48 14 chr2 162885694 162885839 -87802015 - MIR SINE MIR -3 259 110 25 0 0 0 chr2 162886555 162886580 -87801274 + AT_rich Low_complexity Low_complexity 1 25 0 1130 160 0 0 chr2 162886754 162886929 -87800925 - L1 LINE L1 -2185 3961 3787 1000 86 0 0 chr2 162886945 162887073 -87800781 + AluSg SINE Alu 1 128 -182 2021 108 7 3 chr2 162887173 162887469 -87800385 + AluSx SINE Alu 14 310 -2 4440 130 14 8 chr2 162887493 162888225 -87799629 + L1MA3 LINE L1 5570 6305 0 1402 165 42 39 chr2 162888228 162888562 -87799292 + L1MA9 LINE L1 6050 6384 -164 314 27 0 0 chr2 162888575 162888612 -87799242 + tRNA-Tyr-TAC tRNA tRNA 1 37 -39 1360 197 75 0 chr2 162888623 162888902 -87798952 - AluJb SINE Alu -12 300 1 536 161 66 80 chr2 162888904 162889041 -87798813 + L1MA9 LINE L1 6374 6508 -40 10622 181 43 29 chr2 162889077 162891237 -87796617 + MER21-int LTR ERV1 1744 3933 -258 2032 191 48 5 chr2 162891238 162891616 -87796238 + MER57A LTR ERV1 1 394 -9 3226 218 38 48 chr2 162891624 162892459 -87795395 + MER57A-int LTR ERV1 5 831 -6706 419 303 0 21 chr2 162892551 162892696 -87795158 + MER57A-int LTR ERV1 841 982 -4141 525 212 139 82 chr2 162892702 162892742 -87795112 + MER34C LTR ERV1 155 191 -394 1548 185 7 28 chr2 162892742 162893054 -87794800 + AluJb SINE Alu 2 307 0 525 212 139 82 chr2 162893054 162893135 -87794719 + MER34C LTR ERV1 191 266 -319 2644 112 3 0 chr2 162893135 162893509 -87794345 + THE1C LTR MaLR 1 375 0 525 212 139 82 chr2 162893509 162893630 -87794224 + MER34C LTR ERV1 266 413 -172 272 194 0 0 chr2 162893702 162893764 -87794090 + MER57A-int LTR ERV1 1128 1189 -3682 21 71 0 0 chr2 162893780 162893822 -87794032 + AT_rich Low_complexity Low_complexity 1 42 0 1051 184 38 65 chr2 162893856 162894117 -87793737 + MER21B-int LTR ERV1 3087 3340 -2991 480 274 34 0 chr2 162894163 162894280 -87793574 + MER21B-int LTR ERV1 3344 3464 -2867 560 206 22 40 chr2 162894388 162894728 -87793126 + MER21B-int LTR ERV1 1711 2104 -3019 202 56 56 0 chr2 162894728 162894764 -87793090 + (TA)n Simple_repeat Simple_repeat 2 39 0 1604 153 71 42 chr2 162894765 162895118 -87792736 - THE1C LTR MaLR -12 363 1 2214 116 14 14 chr2 162895337 162895692 -87792162 - THE1A LTR MaLR 0 355 1 11071 88 9 25 chr2 162895692 162897252 -87790602 - THE1A-int LTR MaLR 0 1580 46 567 191 8 53 chr2 162897252 162897383 -87790471 + MER21B-int LTR ERV1 4020 4144 -47 2549 207 53 0 chr2 162897460 162897929 -87789925 + MER21B LTR ERV1 1 494 -369 21 36 0 0 chr2 162897948 162897976 -87789878 + AT_rich Low_complexity Low_complexity 1 28 0 371 266 130 49 chr2 162898326 162898510 -87789344 - HAL1 LINE L1 0 2507 2309 289 247 0 0 chr2 162898509 162898582 -87789272 - L1M4 LINE L1 -3111 3035 2963 * 195 160 100 80 chr2 162898728 162898778 -87789076 - L2 LINE L2 0 3272 3222 390 299 146 0 chr2 162899207 162899351 -87788503 - L3 LINE CR1 -33 1544 1380 190 154 64 0 chr2 162899418 162899496 -87788358 + (TAGA)n Simple_repeat Simple_repeat 3 85 0 389 324 52 35 chr2 162899526 162899699 -87788155 - L3 LINE CR1 -210 1367 1192 1067 207 25 8 chr2 162900010 162900247 -87787607 - L1 LINE L1 -2427 3719 3479 6673 174 26 10 chr2 162900248 162902206 -87785648 + L1MB1 LINE L1 3988 5977 -191 5637 55 10 0 chr2 162902206 162902918 -87784936 + L1PA7 LINE L1 5435 6153 -1 250 167 62 0 chr2 162902918 162902966 -87784888 - L1 LINE L1 -3458 2688 2638 1002 196 32 0 chr2 162902966 162903185 -87784669 + L1MB1 LINE L1 5942 6167 -1 805 184 24 24 chr2 162903383 162903590 -87784264 + L1MC3 LINE L1 6906 7090 -695 389 194 78 19 chr2 162903603 162903706 -87784148 + MLT1F1 LTR MaLR 39 147 -420 584 75 0 12 chr2 162903706 162903786 -87784068 + L1MD3 LINE L1 7424 7502 -493 7177 175 63 36 chr2 162903786 162905419 -87782435 - MER52A LTR ERV1 0 1755 1 2430 179 33 16 chr2 162905420 162905912 -87781942 + L1MD3 LINE L1 6208 6342 -2 28 29 0 0 chr2 162906145 162906180 -87781674 + AT_rich Low_complexity Low_complexity 1 35 0 249 227 195 16 chr2 162906272 162906400 -87781454 + L1ME LINE L1 5319 5469 -2339 1611 153 35 7 chr2 162906404 162906686 -87781168 - AluJb SINE Alu -22 290 1 287 254 143 38 chr2 162906841 162907050 -87780804 + L1MD3 LINE L1 5686 5916 -1892 225 310 64 96 chr2 162907549 162907782 -87780072 + MIR3 SINE MIR 5 225 -37 23 0 0 0 chr2 162910883 162910906 -87776948 + AT_rich Low_complexity Low_complexity 1 23 0 1531 179 47 0 chr2 162911277 162911556 -87776298 - AluJo SINE Alu -18 294 3 208 239 0 0 chr2 162911681 162911727 -87776127 + A-rich Low_complexity Low_complexity 3 48 0 822 181 0 19 chr2 162914943 162915103 -87772751 + FAM SINE Alu 1 157 -18 645 49 0 0 chr2 162915105 162915186 -87772668 + (GGAA)n Simple_repeat Simple_repeat 3 83 0 302 244 0 26 chr2 162915303 162915381 -87772473 + L1ME LINE L1 5532 5607 -514 * 1090 218 83 65 chr2 162915375 162915747 -87772107 + L1MD3 LINE L1 6771 7149 -846 * 6415 149 30 5 chr2 162915745 162916907 -87770947 - L1MA6 LINE L1 -1751 4395 3205 5036 154 34 37 chr2 162916901 162918262 -87769592 + L1MA6 LINE L1 4399 5779 -521 * 1985 116 3 14 chr2 162918272 162918557 -87769297 + AluSx SINE Alu 1 282 -30 240 35 0 0 chr2 162918557 162918586 -87769268 + (TC)n Simple_repeat Simple_repeat 2 30 0 240 143 0 0 chr2 162918588 162918630 -87769224 + (TA)n Simple_repeat Simple_repeat 2 43 0 316 234 21 43 chr2 162918630 162918724 -87769130 - L1MC4 LINE L1 -1337 6705 6614 1380 188 0 92 chr2 162918755 162919080 -87768774 + AluJo SINE Alu 1 295 -17 1883 125 24 17 chr2 162919080 162919367 -87768487 + AluSq SINE Alu 1 289 -24 3082 130 15 26 chr2 162919401 162919551 -87768303 + L1MA6 LINE L1 5773 5923 -377 8050 129 20 3 chr2 162919551 162920829 -87767025 + HSMAR2 DNA Mariner 1 1300 -2 3082 130 15 26 chr2 162920829 162921207 -87766647 + L1MA6 LINE L1 5923 6295 -5 1911 241 123 5 chr2 162921223 162921874 -87765980 + L1MC4a LINE L1 7081 7808 0 407 340 75 19 chr2 162922143 162922355 -87765499 - MIR SINE MIR -27 235 12 482 213 0 0 chr2 162922536 162922616 -87765238 - Tigger5 DNA MER2_type -2 2321 2242 342 253 0 0 chr2 162922606 162922685 -87765169 + Tigger5 DNA MER2_type 2242 2320 -3 * 302 210 16 0 chr2 162922685 162922746 -87765108 - Tigger5 DNA MER2_type -2245 78 17 22 0 0 0 chr2 162922908 162922930 -87764924 + AT_rich Low_complexity Low_complexity 1 22 0 431 338 13 6 chr2 162922967 162923124 -87764730 - MER5A DNA MER1_type -6 183 26 1622 146 14 4 chr2 162924446 162924727 -87763127 - L1MB7 LINE L1 -1 6183 5900 468 321 42 0 chr2 162924881 162925046 -87762808 + MIR SINE MIR 53 224 -38 361 264 0 138 chr2 162925153 162925312 -87762542 + MIR3 SINE MIR 38 174 -34 752 210 33 0 chr2 162925381 162925562 -87762292 + L1MC1 LINE L1 3587 3773 -2373 4624 146 52 1 chr2 162925562 162926376 -87761478 + L1MC1 LINE L1 5477 6331 -2 885 288 62 0 chr2 162926450 162926742 -87761112 + Charlie7 DNA MER1_type 24 333 -2279 21 57 0 0 chr2 162926902 162926937 -87760917 + AT_rich Low_complexity Low_complexity 1 35 0 335 319 18 18 chr2 162927833 162927946 -87759908 + L2 LINE L2 3177 3289 -24 315 278 172 17 chr2 162928624 162928804 -87759050 - MIR SINE MIR -1 261 54 423 305 64 14 chr2 162928998 162929139 -87758715 + MIR SINE MIR 41 188 -74 414 0 0 0 chr2 162930658 162930704 -87757150 + (CA)n Simple_repeat Simple_repeat 2 47 0 22 56 0 0 chr2 162932480 162932516 -87755338 + AT_rich Low_complexity Low_complexity 1 36 0 26 88 0 0 chr2 162932843 162932911 -87754943 + AT_rich Low_complexity Low_complexity 1 68 0 2386 138 42 22 chr2 162934565 162934971 -87752883 - Tigger2a DNA MER2_type -16 418 5 210 263 232 0 chr2 162935451 162935550 -87752304 - L2 LINE L2 -8 3305 3184 458 244 32 8 chr2 162936619 162936742 -87751112 - L1ME4a LINE L1 -30 6091 5966 29 78 0 0 chr2 162937355 162937419 -87750435 + AT_rich Low_complexity Low_complexity 1 64 0 402 292 154 51 chr2 162937530 162937725 -87750129 - L2 LINE L2 -1 3271 3057 322 353 16 8 chr2 162938016 162938138 -87749716 - MER5A DNA MER1_type -12 177 55 785 282 57 4 chr2 162938325 162938573 -87749281 - MIR SINE MIR 0 262 2 203 345 170 47 chr2 162939131 162939638 -87748216 - L2 LINE L2 -400 2914 2346 694 244 116 45 chr2 162939638 162939880 -87747974 + MIR SINE MIR 3 261 -1 670 287 62 68 chr2 162941164 162941533 -87746321 - L2 LINE L2 -5 3308 2942 * 768 242 157 8 chr2 162941529 162941777 -87746077 - L2 LINE L2 -638 2676 2392 416 256 158 35 chr2 162941782 162941985 -87745869 - L2 LINE L2 -1390 1924 1697 362 320 41 0 chr2 162942605 162942727 -87745127 + L2 LINE L2 3187 3313 0 242 234 62 0 chr2 162943870 162943934 -87743920 + MLT1K LTR MaLR 203 270 -318 211 208 75 38 chr2 162944308 162944361 -87743493 - MIR SINE MIR -67 141 87 315 352 9 0 chr2 162944842 162944947 -87742907 - MER5A DNA MER1_type -80 109 4 346 225 107 47 chr2 162944998 162945167 -87742687 + L2 LINE L2 2951 3129 -184 2192 241 57 60 chr2 162945170 162945972 -87741882 + L1MEc LINE L1 29 828 -5568 * 3448 159 0 36 chr2 162945970 162946654 -87741200 + L1P LINE L1 4557 5215 -931 6452 80 13 1 chr2 162946654 162947689 -87740165 + L1PA13 LINE L1 5116 6161 -2 3537 195 73 61 chr2 162947689 162948043 -87739811 + L1MB7 LINE L1 4484 4832 -1352 513 0 0 0 chr2 162948043 162948100 -87739754 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 3537 195 73 61 chr2 162948100 162949437 -87738417 + L1MB7 LINE L1 4832 6174 -10 1313 232 76 25 chr2 162949442 162950050 -87737804 + L1MEc LINE L1 1627 2265 -4131 219 250 19 0 chr2 162950104 162950156 -87737698 + L2 LINE L2 3255 3307 -6 27 29 0 0 chr2 162950262 162950296 -87737558 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr2 162951512 162951541 -87736313 + AT_rich Low_complexity Low_complexity 1 29 0 4599 182 23 10 chr2 162951963 162953174 -87734680 - L1MB5 LINE L1 -8 6166 4941 919 104 0 37 chr2 162953177 162953311 -87734543 + AluJb SINE Alu 5 133 -179 2565 173 87 35 chr2 162953340 162953969 -87733885 - L1MB7 LINE L1 -10 6174 5513 1550 206 34 43 chr2 162953969 162954406 -87733448 - L1MB5 LINE L1 -1183 4963 4531 338 279 0 35 chr2 162954781 162954867 -87732987 - MER5A DNA MER1_type -98 91 9 687 201 6 19 chr2 162954885 162955044 -87732810 + MER5B DNA MER1_type 21 177 -1 801 244 105 29 chr2 162955436 162955824 -87732030 + L1ME LINE L1 5220 5636 -534 340 65 5 136 chr2 162955829 162955905 -87731949 + Alu SINE Alu 245 301 -1 329 286 0 0 chr2 162955907 162956026 -87731828 + L1ME LINE L1 5644 5762 -400 481 224 109 38 chr2 162956072 162956255 -87731599 - MIR SINE MIR -21 241 46 6955 185 33 9 chr2 162956263 162958621 -87729233 - L1PA16 LINE L1 0 6166 3713 603 175 329 7 chr2 162958658 162958801 -87729053 + MER5A DNA MER1_type 1 189 0 1675 195 3 7 chr2 162959822 162960124 -87727730 - AluSx SINE Alu -11 301 1 1335 307 68 53 chr2 162960714 162961561 -87726293 + L1M3b LINE L1 1226 2085 -5411 30 0 0 0 chr2 162961585 162961615 -87726239 + AT_rich Low_complexity Low_complexity 1 30 0 2205 247 67 36 chr2 162961615 162962297 -87725557 + L1M3b LINE L1 2097 2756 -4809 213 65 0 0 chr2 162962297 162962328 -87725526 + (TG)n Simple_repeat Simple_repeat 2 32 0 2205 247 67 36 chr2 162962328 162963161 -87724693 + L1M3b LINE L1 2756 3636 -3929 1386 170 52 48 chr2 162963171 162963442 -87724412 + AluJo SINE Alu 11 282 -30 378 42 0 0 chr2 162963445 162963493 -87724361 + (CA)n Simple_repeat Simple_repeat 2 49 0 7569 211 29 22 chr2 162963494 162963724 -87724130 + L1M3b LINE L1 3632 3859 -3706 11174 33 0 3 chr2 162963724 162965843 -87722011 + L1PA4 LINE L1 4022 6154 -1 7569 211 29 22 chr2 162965843 162967483 -87720371 + L1M3b LINE L1 3859 5516 -2049 4372 129 32 61 chr2 162967483 162968364 -87719490 + L1MA9 LINE L1 5456 6310 -2 725 132 20 26 chr2 162968365 162968517 -87719337 + L1MA9 LINE L1 6160 6310 -2 1147 167 38 0 chr2 162969730 162969940 -87717914 + L1PA16 LINE L1 5932 6149 -17 25 31 0 0 chr2 162969940 162969972 -87717882 + AT_rich Low_complexity Low_complexity 1 32 0 2301 105 0 6 chr2 162970308 162970623 -87717231 - AluSq SINE Alu 0 313 1 2132 83 18 0 chr2 162970847 162971164 -87716690 - AluSx SINE Alu 0 322 1 390 249 145 25 chr2 162971190 162971540 -87716314 - L1MC/D LINE L1 -351 5770 5415 543 215 153 21 chr2 162971643 162971787 -87716067 + MIR SINE MIR 3 165 -97 365 269 81 11 chr2 162971830 162972016 -87715838 - L1MC/D LINE L1 -860 5286 5088 28 61 0 0 chr2 162972725 162972774 -87715080 + AT_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr2 162973520 162973545 -87714309 + AT_rich Low_complexity Low_complexity 1 25 0 2276 153 53 8 chr2 162973587 162973966 -87713888 + MSTB LTR MaLR 31 426 0 24 0 0 0 chr2 162974432 162974456 -87713398 + AT_rich Low_complexity Low_complexity 1 24 0 1846 155 7 3 chr2 162975937 162976233 -87711621 + AluJb SINE Alu 1 297 -15 254 400 53 24 chr2 162976277 162976650 -87711204 + L2 LINE L2 2811 3272 0 9712 201 85 19 chr2 162976816 162979157 -87708697 + L1MDa LINE L1 27 2521 -4019 3677 126 34 90 chr2 162979159 162979991 -87707863 - LTR1 LTR ERV1 0 785 1 1507 166 3 75 chr2 162980046 162980353 -87707501 + AluJo SINE Alu 6 290 -22 1152 271 34 11 chr2 162980360 162980806 -87707048 + L1MDa LINE L1 3658 4113 -2427 * 2576 194 60 15 chr2 162980773 162981801 -87706053 + L1PA15 LINE L1 4895 5973 -586 229 121 61 20 chr2 162981833 162981932 -87705922 + (TA)n Simple_repeat Simple_repeat 2 104 0 2910 144 2 33 chr2 162981987 162982501 -87705353 + L1PA15 LINE L1 6062 6559 0 1130 186 7 81 chr2 162982591 162982756 -87705098 + L1MD1 LINE L1 5167 5343 -899 1505 123 100 16 chr2 162982756 162983030 -87704824 + AluSx SINE Alu 14 308 0 1130 186 7 81 chr2 162983030 162983235 -87704619 + L1MD1 LINE L1 5343 5520 -722 1399 164 50 47 chr2 162983237 162983578 -87704276 + L1MD1 LINE L1 5901 6242 0 319 193 35 0 chr2 162983821 162983878 -87703976 - MIR3 SINE MIR -31 177 119 2559 268 86 90 chr2 162983912 162985527 -87702327 + L1M2 LINE L1 13 1621 -5228 11441 51 3 0 chr2 162987438 162988876 -87698978 - L1P LINE L1 -1325 4821 3380 3721 47 0 0 chr2 162988875 162989343 -87698511 + L1P LINE L1 4829 5296 -850 * 256 362 60 0 chr2 162989566 162989682 -87698172 - L3 LINE CR1 -392 1185 1063 476 228 4 3 chr2 162989843 162989964 -87697890 - L1ME1 LINE L1 -50 6116 6016 2621 256 36 30 chr2 162989975 162990763 -87697091 - L1M4 LINE L1 -1822 4324 3523 1957 138 10 3 chr2 162990763 162991054 -87696800 - AluSx SINE Alu -14 298 6 2621 256 36 30 chr2 162991054 162991373 -87696481 - L1M4 LINE L1 -2623 3523 3207 * 3387 272 86 22 chr2 162991357 162992421 -87695433 - HAL1 LINE L1 -1044 1463 290 2016 152 0 0 chr2 162992421 162992724 -87695130 - AluSx SINE Alu -8 304 2 3387 272 86 22 chr2 162992724 162993034 -87694820 - HAL1 LINE L1 -2217 290 1 328 306 117 0 chr2 162993287 162993398 -87694456 - L2 LINE L2 -17 3255 3132 314 274 294 20 chr2 162993913 162994117 -87693737 - MIR SINE MIR 0 262 3 205 363 52 22 chr2 162994288 162994423 -87693431 - L2 LINE L2 0 3313 3175 208 296 0 0 chr2 162994726 162994770 -87693084 + L2 LINE L2 3017 3060 -253 226 326 151 0 chr2 162994818 162994904 -87692950 + L2 LINE L2 3174 3272 0 494 339 192 27 chr2 162994952 162995515 -87692339 - L2 LINE L2 -443 2871 2216 437 352 11 11 chr2 162995516 162995692 -87692162 - MER5B DNA MER1_type 0 178 3 4234 222 28 42 chr2 162995903 162997755 -87690099 + L1PA10 LINE L1 48 3178 -4406 1079 150 10 0 chr2 162997857 162998050 -87689804 + L1PA3 LINE L1 5959 6153 -2 * 15683 139 26 2 chr2 162998048 163001613 -87686241 + L1PA10 LINE L1 3970 7602 -4 350 328 0 42 chr2 163001738 163001857 -87685997 + MIR SINE MIR 1 114 -148 295 306 0 24 chr2 163001886 163002010 -87685844 + (TA)n Simple_repeat Simple_repeat 1 121 0 732 269 43 24 chr2 163002038 163002291 -87685563 - MIR SINE MIR -1 261 4 188 329 57 0 chr2 163003837 163003907 -87683947 + L2 LINE L2 2919 2992 -280 794 240 153 0 chr2 163005022 163005218 -87682636 - MIR SINE MIR -24 238 13 237 108 0 0 chr2 163008152 163008189 -87679665 + (CA)n Simple_repeat Simple_repeat 2 38 0 326 333 131 31 chr2 163010156 163010378 -87677476 - L2 LINE L2 0 3272 3029 461 333 162 18 chr2 163010411 163010807 -87677047 - L2 LINE L2 -407 2907 2455 1074 170 64 17 chr2 163011380 163011660 -87676194 - MLT1A1 LTR MaLR 0 374 1 438 304 54 34 chr2 163011808 163011956 -87675898 - MIR3 SINE MIR -38 170 20 485 305 137 14 chr2 163012188 163012545 -87675309 + L1ME4a LINE L1 5526 5926 -195 244 239 0 87 chr2 163013651 163013743 -87674111 - L1ME4a LINE L1 -56 6065 5982 1091 297 25 2 chr2 163013780 163014168 -87673686 - L1ME4a LINE L1 -239 5882 5478 3180 108 15 4 chr2 163014891 163015371 -87672483 - L1MA4 LINE L1 -410 5890 5406 2214 132 14 0 chr2 163015371 163015741 -87672113 + L1MA4 LINE L1 5914 6289 -11 503 269 146 14 chr2 163015990 163016209 -87671645 + MIR SINE MIR 14 261 -1 492 292 110 14 chr2 163016427 163016636 -87671218 + MIR SINE MIR 31 259 -3 566 304 9 51 chr2 163017137 163017351 -87670503 + MIR SINE MIR 48 252 -10 195 355 40 57 chr2 163017338 163017462 -87670392 + L2 LINE L2 2934 3055 -217 * 2283 84 3 7 chr2 163017869 163018179 -87669675 + AluY SINE Alu 1 309 -2 15292 51 1 1 chr2 163018179 163020604 -87667250 + L1PA4 LINE L1 3451 5875 -280 2105 189 33 0 chr2 163020704 163021101 -87666753 - MSTB1 LTR MaLR -22 410 1 236 139 0 0 chr2 163021151 163021187 -87666667 + MER103 DNA DNA 60 95 -71 301 301 23 45 chr2 163022406 163022539 -87665315 - MIR3 SINE MIR 0 208 79 428 312 0 36 chr2 163023219 163023357 -87664497 + L2 LINE L2 3168 3300 -13 22 0 0 0 chr2 163023740 163023762 -87664092 + AT_rich Low_complexity Low_complexity 1 22 0 365 213 64 11 chr2 163023781 163023875 -87663979 - MIR SINE MIR -87 175 77 2065 138 0 0 chr2 163024091 163024387 -87663467 - AluSx SINE Alu -16 296 1 545 141 24 0 chr2 163025584 163025669 -87662185 - FLAM_A SINE Alu -18 124 38 24 53 0 0 chr2 163025724 163025762 -87662092 + AT_rich Low_complexity Low_complexity 1 38 0 1141 136 0 6 chr2 163026404 163026580 -87661274 - L1PA16 LINE L1 -16 6150 5976 1487 169 42 82 chr2 163026664 163027042 -87660812 - MLT1A1 LTR MaLR 0 365 3 192 188 0 0 chr2 163027738 163027770 -87660084 + MIR SINE MIR 217 248 -14 219 254 0 0 chr2 163027784 163027847 -87660007 + A-rich Low_complexity Low_complexity 2 64 0 542 301 106 13 chr2 163027932 163028158 -87659696 - MIR SINE MIR 0 262 16 242 148 19 0 chr2 163028678 163028732 -87659122 + (TG)n Simple_repeat Simple_repeat 2 56 0 628 308 161 14 chr2 163029524 163029872 -87657982 - L3 LINE CR1 -56 1521 1123 201 217 22 0 chr2 163030391 163030437 -87657417 + (TA)n Simple_repeat Simple_repeat 1 47 0 386 250 62 0 chr2 163030699 163030795 -87657059 + L2 LINE L2 3179 3280 -33 26 50 0 0 chr2 163032120 163032160 -87655694 + AT_rich Low_complexity Low_complexity 1 40 0 1093 103 22 197 chr2 163032388 163032586 -87655268 - Tigger2 DNA MER2_type -2454 264 141 1734 177 7 0 chr2 163032586 163032874 -87654980 - AluSx SINE Alu -22 290 1 1093 103 22 197 chr2 163032874 163032995 -87654859 - Tigger2 DNA MER2_type -2576 142 1 727 236 47 0 chr2 163033936 163034084 -87653770 - FRAM SINE Alu -11 155 1 2022 249 98 23 chr2 163034325 163035140 -87652714 + L1ME3A LINE L1 5175 6037 -133 2160 103 0 3 chr2 163035771 163036063 -87651791 + AluSg SINE Alu 1 291 -19 28 0 0 0 chr2 163036146 163036174 -87651680 + AT_rich Low_complexity Low_complexity 1 28 0 14581 37 3 1 chr2 163036529 163039082 -87648772 + L1PA4 LINE L1 3594 6153 -2 618 200 26 39 chr2 163039812 163039967 -87647887 + MER5B DNA MER1_type 26 178 0 1781 128 47 65 chr2 163040014 163040396 -87647458 - THE1C LTR MaLR 0 375 1 357 269 75 0 chr2 163040422 163040515 -87647339 - MER5A DNA MER1_type -80 109 10 24 85 0 0 chr2 163040520 163040579 -87647275 + AT_rich Low_complexity Low_complexity 1 59 0 5777 122 18 3 chr2 163040628 163041519 -87646335 - L1PA16 LINE L1 -9 6157 5254 439 223 176 34 chr2 163041587 163041735 -87646119 - MER5B DNA MER1_type -9 169 1 2736 148 30 2 chr2 163042725 163043192 -87644662 + L1PA16 LINE L1 5683 6162 -4 313 361 105 11 chr2 163043855 163044132 -87643722 - L2 LINE L2 -1882 1432 1130 6022 220 21 8 chr2 163044154 163045614 -87642240 + L1P LINE L1 3102 4581 -1565 183 42 0 0 chr2 163048416 163048440 -87639414 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 9934 52 3 0 chr2 163049762 163051012 -87636842 - L1P LINE L1 -1512 4634 3381 7250 49 1 1 chr2 163051012 163052338 -87635516 + L1PA5 LINE L1 4829 6154 0 1553 195 69 5 chr2 163052504 163052894 -87634960 + L1PB4 LINE L1 1610 2024 -4825 * 5907 89 48 1 chr2 163052891 163053742 -87634112 - L1PA11 LINE L1 0 6174 5284 1431 255 13 29 chr2 163053736 163054191 -87633663 + L1PB4 LINE L1 2005 2452 -4397 * 8406 170 18 21 chr2 163054196 163055272 -87632582 + L1PB4 LINE L1 4196 5273 -1732 2201 111 25 43 chr2 163055272 163055640 -87632214 - THE1B LTR MaLR 0 364 4 11501 104 5 0 chr2 163055643 163057215 -87630639 - THE1B-int LTR MaLR 0 1580 1 2262 128 19 27 chr2 163057215 163057582 -87630272 - THE1B LTR MaLR 0 364 1 8406 170 18 21 chr2 163057582 163058809 -87629045 + L1PB4 LINE L1 5274 6503 -502 249 33 0 0 chr2 163058809 163058839 -87629015 + (TG)n Simple_repeat Simple_repeat 2 31 0 * 279 0 0 0 chr2 163058838 163058869 -87628985 + (TA)n Simple_repeat Simple_repeat 1 31 0 8406 170 18 21 chr2 163058839 163059249 -87628605 + L1PB4 LINE L1 6503 7004 -1 676 119 10 0 chr2 163059378 163059479 -87628375 - U13 snRNA snRNA 0 104 3 403 267 86 9 chr2 163059865 163059981 -87627873 - L2 LINE L2 -11 3302 3178 21 36 0 0 chr2 163062834 163062862 -87624992 + AT_rich Low_complexity Low_complexity 1 28 0 557 239 142 0 chr2 163067417 163067572 -87620282 - MER117 DNA MER1_type -20 177 1 24 0 0 0 chr2 163067681 163067705 -87620149 + AT_rich Low_complexity Low_complexity 1 24 0 806 153 0 0 chr2 163068079 163068197 -87619657 - FLAM_C SINE Alu -14 119 2 296 354 31 19 chr2 163068197 163068358 -87619496 + L3b LINE CR1 1221 1383 -200 657 261 183 48 chr2 163068595 163069512 -87618342 + L1MC4a LINE L1 4121 5158 -988 2188 245 55 30 chr2 163069562 163070285 -87617569 + L1MC4a LINE L1 5266 6006 -1802 2246 122 0 0 chr2 163070286 163070597 -87617257 + AluSx SINE Alu 1 311 -1 2064 148 104 0 chr2 163071064 163071429 -87616425 + MSTA LTR MaLR 2 404 -24 303 176 0 0 chr2 163071429 163071480 -87616374 + MSTA LTR MaLR 376 426 -2 2028 121 13 3 chr2 163071779 163072085 -87615769 + AluSx SINE Alu 1 309 -3 27 29 0 0 chr2 163072225 163072259 -87615595 + AT_rich Low_complexity Low_complexity 1 34 0 913 288 113 18 chr2 163072493 163072819 -87615035 - L1ME3A LINE L1 -280 5890 5596 2532 34 3 3 chr2 163072819 163073115 -87614739 + AluY SINE Alu 1 296 -15 913 288 113 18 chr2 163073115 163073818 -87614036 - L1ME3A LINE L1 -574 5596 4759 357 266 105 61 chr2 163073849 163074240 -87613614 - L1MC5 LINE L1 -284 7677 7270 308 312 124 26 chr2 163074209 163074555 -87613299 - L1MC4 LINE L1 -568 7474 7095 * 405 217 47 0 chr2 163074581 163074687 -87613167 - L1MC5 LINE L1 -850 7111 7001 1099 216 48 11 chr2 163074773 163075112 -87612742 + L1ME2 LINE L1 5654 5999 -167 363 179 15 0 chr2 163075155 163075222 -87612632 - L1MC4 LINE L1 -1040 7002 6935 * 1042 150 12 95 chr2 163075219 163075360 -87612494 - L1MC2 LINE L1 0 6344 6232 1590 199 14 3 chr2 163075360 163075657 -87612197 - AluJo SINE Alu -12 300 1 1042 150 12 95 chr2 163075657 163075768 -87612086 - L1MC2 LINE L1 -112 6232 6113 * 1623 220 135 0 chr2 163075765 163076335 -87611519 - L1 LINE L1 -3405 2945 2288 * 37446 34 26 3 chr2 163076330 163081776 -87606078 - L1PA3 LINE L1 0 6155 580 539 60 0 0 chr2 163081745 163081812 -87606042 - L1PA3 LINE L1 -6048 98 32 * 4022 251 67 39 chr2 163081814 163082710 -87605144 - L1 LINE L1 -4048 2302 1432 2729 112 12 69 chr2 163082710 163083201 -87604653 - L1PA16 LINE L1 0 6166 5704 4022 251 67 39 chr2 163083201 163083547 -87604307 - L1 LINE L1 -4918 1432 1097 2920 179 13 20 chr2 163083547 163084100 -87603754 + MER44D DNA MER2_type 1 604 -1 4022 251 67 39 chr2 163084100 163085248 -87602606 - L1 LINE L1 -5253 1097 11 230 270 32 16 chr2 163085683 163085809 -87602045 - L1 LINE L1 -3684 2462 2335 2506 57 0 13 chr2 163085815 163086129 -87601725 - AluY SINE Alu -1 310 1 2774 30 0 6 chr2 163086136 163086471 -87601383 - L1PA2 LINE L1 0 6155 5823 547 0 0 0 chr2 163086471 163086534 -87601320 + L1P1 LINE L1 5717 5779 -376 28 29 0 0 chr2 163086549 163086584 -87601270 + AT_rich Low_complexity Low_complexity 1 35 0 1998 252 108 23 chr2 163087069 163087487 -87600367 + MLT1E2 LTR MaLR 1 483 -143 2213 125 33 22 chr2 163087487 163087847 -87600007 - THE1B LTR MaLR 0 364 1 1998 252 108 23 chr2 163087847 163088004 -87599850 + MLT1E2 LTR MaLR 483 625 -1 1032 202 20 134 chr2 163088096 163088530 -87599324 + L1MDa LINE L1 889 1270 -5270 237 65 0 0 chr2 163088530 163088561 -87599293 + (TA)n Simple_repeat Simple_repeat 1 31 0 1032 202 20 134 chr2 163088561 163088581 -87599273 + L1MDa LINE L1 1270 1291 -5249 743 114 18 0 chr2 163088580 163088694 -87599160 + L1PA4 LINE L1 1 116 -6030 * 4124 63 0 0 chr2 163088676 163089212 -87598642 + L1PA4 LINE L1 1094 1629 -4517 14792 36 1 0 chr2 163089212 163091804 -87596050 + L1PA4 LINE L1 3553 6153 -2 745 200 30 96 chr2 163091811 163091954 -87595900 + L1MDa LINE L1 1307 1425 -5115 1744 161 13 23 chr2 163091954 163092259 -87595595 + AluJo SINE Alu 10 311 -1 745 200 30 96 chr2 163092259 163092385 -87595469 + L1MDa LINE L1 1425 1558 -4982 483 272 173 6 chr2 163092438 163092600 -87595254 + MIR SINE MIR 74 262 0 3206 203 71 36 chr2 163092948 163093980 -87593874 + L1MDa LINE L1 1540 2607 -3933 4455 228 119 67 chr2 163094049 163095091 -87592763 + L1MDa LINE L1 269 1255 -5287 1820 143 7 46 chr2 163095091 163095398 -87592456 + AluSq SINE Alu 1 295 -18 4455 228 119 67 chr2 163095398 163095445 -87592409 + L1MDa LINE L1 1255 1298 -5244 1854 183 0 0 chr2 163095445 163095740 -87592114 + AluJo SINE Alu 1 295 -17 4455 228 119 67 chr2 163095740 163096236 -87591618 + L1MDa LINE L1 1298 1767 -4775 2295 104 0 0 chr2 163096236 163096533 -87591321 + AluSx SINE Alu 5 301 -11 4455 228 119 67 chr2 163096533 163096814 -87591040 + L1MDa LINE L1 1767 2032 -4510 1874 183 0 3 chr2 163096814 163097126 -87590728 + AluJb SINE Alu 1 311 -1 4455 228 119 67 chr2 163097126 163097527 -87590327 + L1MDa LINE L1 2032 2658 -3884 5061 240 83 14 chr2 163097543 163099341 -87588513 + L1MDa LINE L1 2599 4519 -2021 2852 148 94 49 chr2 163099345 163100366 -87587488 + L1MCa LINE L1 991 2162 -4264 1621 199 0 0 chr2 163100366 163100647 -87587207 + AluJb SINE Alu 1 281 -31 2852 148 94 49 chr2 163100647 163100777 -87587077 + L1MCa LINE L1 2162 2285 -4141 1793 57 4 37 chr2 163100822 163101068 -87586786 + L1PB1 LINE L1 5911 6148 -3 2774 161 37 42 chr2 163101103 163101784 -87586070 + L1MB3 LINE L1 5152 5828 -355 635 114 38 0 chr2 163101803 163101908 -87585946 + L1MB3 LINE L1 5774 5882 -301 * 1940 89 18 4 chr2 163101905 163102186 -87585668 - L1P4 LINE L1 -529 5636 5352 6865 57 7 0 chr2 163102230 163103560 -87584294 - L1PA7 LINE L1 -14 6140 4807 11265 85 34 8 chr2 163103567 163105114 -87582740 - L1P3 LINE L1 -4874 1587 1 9022 163 18 1 chr2 163105124 163106762 -87581092 - L1P4 LINE L1 -783 5363 3698 1407 233 47 14 chr2 163106745 163107174 -87580680 + L1MB5 LINE L1 4084 4526 -1620 * 1057 199 90 28 chr2 163107177 163107564 -87580290 + L1MA9 LINE L1 2970 3380 -2766 7399 173 25 20 chr2 163107570 163109516 -87578338 + L1MA9 LINE L1 3810 5770 -542 1518 152 126 4 chr2 163109516 163109785 -87578069 + AluSx SINE Alu 1 302 0 7399 173 25 20 chr2 163109785 163109830 -87578024 + L1MA9 LINE L1 5770 5813 -499 2358 51 0 0 chr2 163109830 163110106 -87577748 + AluY SINE Alu 36 311 0 31 26 0 0 chr2 163110132 163110170 -87577684 + GC_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr2 163117218 163117248 -87570606 + AT_rich Low_complexity Low_complexity 1 30 0 2377 150 83 0 chr2 163118883 163119342 -87568512 + L1MA9 LINE L1 5816 6312 0 2272 113 0 0 chr2 163119352 163119652 -87568202 + AluSq SINE Alu 14 313 0 4879 180 10 16 chr2 163119661 163121309 -87566545 + L1MB5 LINE L1 4519 6157 -17 189 132 0 0 chr2 163121329 163121367 -87566487 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 1288 202 115 0 chr2 163121495 163121747 -87566107 + AluJo SINE Alu 1 281 -31 26 0 0 0 chr2 163121747 163121773 -87566081 + AT_rich Low_complexity Low_complexity 1 26 0 252 146 0 0 chr2 163122178 163122219 -87565635 - MADE1 DNA Mariner 0 80 40 226 376 55 0 chr2 163122977 163123086 -87564768 - L2 LINE L2 0 3313 3199 1412 254 75 54 chr2 163123659 163124330 -87563524 + L2 LINE L2 2470 3169 -144 1815 155 11 4 chr2 163124330 163124608 -87563246 - AluJb SINE Alu -32 280 1 1412 254 75 54 chr2 163124608 163124741 -87563113 + L2 LINE L2 3169 3298 -15 197 203 17 102 chr2 163125574 163125633 -87562221 - L2 LINE L2 0 3272 3219 432 0 0 0 chr2 163127554 163127602 -87560252 + (TG)n Simple_repeat Simple_repeat 1 48 0 270 0 0 0 chr2 163127601 163127631 -87560223 + (GA)n Simple_repeat Simple_repeat 1 30 0 * 1736 162 4 4 chr2 163127631 163127909 -87559945 - AluJb SINE Alu -34 278 1 24 0 0 0 chr2 163127912 163127936 -87559918 + AT_rich Low_complexity Low_complexity 1 24 0 1626 144 11 23 chr2 163128029 163128292 -87559562 + AluJo SINE Alu 29 288 -24 500 294 79 17 chr2 163128413 163128590 -87559264 + LTR16A LTR ERVL 257 444 -6 795 315 93 13 chr2 163128596 163129185 -87558669 + HERV16 LTR ERVL 1 666 -4330 416 331 33 0 chr2 163129258 163129409 -87558445 + HERV16 LTR ERVL 686 841 -4155 459 0 0 0 chr2 163129460 163129511 -87558343 + (GGAA)n Simple_repeat Simple_repeat 2 52 0 1789 291 72 14 chr2 163129715 163130268 -87557586 + HERV16 LTR ERVL 993 1577 -3419 2548 53 0 3 chr2 163130277 163130577 -87557277 + AluY SINE Alu 1 299 -12 1725 297 21 12 chr2 163130619 163131104 -87556750 + HERV16 LTR ERVL 1690 2178 -2818 14258 169 28 21 chr2 163131121 163133777 -87554077 - L1MA5A LINE L1 -300 6639 3943 1620 199 0 3 chr2 163133777 163134059 -87553795 + AluJo SINE Alu 8 288 -24 14258 169 28 21 chr2 163134059 163135187 -87552667 - L1MA5A LINE L1 -2996 3943 2825 1273 161 26 43 chr2 163135187 163135417 -87552437 - AluJo SINE Alu -86 226 1 11377 162 31 100 chr2 163135418 163135683 -87552171 - L1MA5A LINE L1 -3958 2831 2549 1957 166 0 0 chr2 163135683 163135978 -87551876 - AluJb SINE Alu -17 295 1 11377 162 31 100 chr2 163135978 163138778 -87549076 - L1MA5A LINE L1 -4240 2549 14 1647 233 67 36 chr2 163139044 163139674 -87548180 + HAL1b LINE L1 513 1161 -187 387 0 0 0 chr2 163139734 163139777 -87548077 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 803 261 6 0 chr2 163139777 163139953 -87547901 + MER8 DNA MER2_type 3 179 -60 351 222 0 0 chr2 163139928 163139991 -87547863 + MER2 DNA MER2_type 282 344 -1 * 276 240 54 54 chr2 163140030 163140159 -87547695 + L1ME4a LINE L1 5993 6121 0 2194 115 3 0 chr2 163140242 163140538 -87547316 - AluSq SINE Alu -16 297 1 378 287 102 12 chr2 163140724 163140891 -87546963 - L2 LINE L2 -1315 1999 1818 3643 76 23 12 chr2 163140962 163141477 -87546377 - L1PA10 LINE L1 -1 6167 5647 587 128 0 21 chr2 163141477 163141571 -87546283 + L1P4 LINE L1 5477 5568 -600 * 6702 115 14 4 chr2 163141569 163142915 -87544939 - L1PA10 LINE L1 -534 5634 4278 1010 198 0 10 chr2 163142915 163143172 -87544682 - AluJo SINE Alu -6 306 1 1754 175 0 7 chr2 163143521 163143813 -87544041 + AluJb SINE Alu 14 303 -9 344 315 50 46 chr2 163143853 163144072 -87543782 + L1MC4a LINE L1 3925 4144 -2002 448 349 32 26 chr2 163144087 163144399 -87543455 + L1MC4a LINE L1 4220 4533 -1613 278 260 124 23 chr2 163144399 163144576 -87543278 + L1MC4a LINE L1 5730 5924 -1884 202 64 0 85 chr2 163144623 163144670 -87543184 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1980 158 0 64 chr2 163145024 163145384 -87542470 + MER1B DNA MER1_type 1 337 0 2387 92 0 0 chr2 163145536 163145829 -87542025 - AluY SINE Alu -18 293 1 270 238 48 0 chr2 163146163 163146226 -87541628 + LTR67 LTR ERVL 2 67 -490 266 204 0 0 chr2 163147093 163147142 -87540712 + LTR67 LTR ERVL 19 67 -490 210 368 19 0 chr2 163147162 163147268 -87540586 - L2 LINE L2 -2196 1118 1011 673 299 72 72 chr2 163148645 163149431 -87538423 + L1ME LINE L1 361 1146 -5575 382 318 117 78 chr2 163149433 163149577 -87538277 + L1MEc LINE L1 466 603 -5927 3762 121 24 95 chr2 163149577 163150114 -87537740 + L1MB2 LINE L1 5408 5981 -190 2523 54 3 0 chr2 163150114 163150410 -87537444 + AluSp SINE Alu 1 297 -16 3762 121 24 95 chr2 163150410 163150555 -87537299 + L1MB2 LINE L1 5981 6025 -146 2450 96 0 3 chr2 163150555 163150868 -87536986 + AluSq SINE Alu 1 312 -1 3762 121 24 95 chr2 163150868 163151004 -87536850 + L1MB2 LINE L1 6025 6169 -2 382 318 117 78 chr2 163151004 163151331 -87536523 + L1MEc LINE L1 603 955 -5575 595 243 22 0 chr2 163151433 163151614 -87536240 + L1ME LINE L1 1768 1952 -4588 2575 238 75 17 chr2 163151720 163152899 -87534955 + L1ME LINE L1 2314 3520 -3020 911 239 74 60 chr2 163152894 163153042 -87534812 + L1MEc LINE L1 1135 1279 -5442 * 2697 39 0 0 chr2 163153042 163153351 -87534503 + AluY SINE Alu 1 309 -2 911 239 74 60 chr2 163153351 163153683 -87534171 + L1MEc LINE L1 1279 1629 -5092 1645 183 13 27 chr2 163153683 163153983 -87533871 + AluJo SINE Alu 1 296 -16 911 239 74 60 chr2 163153983 163154133 -87533721 + L1MEc LINE L1 1629 1775 -4946 1888 152 7 7 chr2 163154143 163154433 -87533421 + AluJo SINE Alu 1 290 -22 320 333 78 0 chr2 163154443 163154596 -87533258 + L1ME2 LINE L1 1613 1777 -4765 1004 272 42 20 chr2 163154603 163155150 -87532704 + L1ME2 LINE L1 3516 4074 -2466 27836 125 27 65 chr2 163155170 163160725 -87527129 + L1P LINE L1 12 5351 -795 4843 58 0 0 chr2 163160726 163161325 -87526529 - L1PA5 LINE L1 0 6154 5556 229 0 0 29 chr2 163161343 163161377 -87526477 + L1PA7 LINE L1 6114 6146 -8 2206 239 123 39 chr2 163161443 163162507 -87525347 + L1ME2 LINE L1 4047 5200 -1340 2047 220 23 33 chr2 163162530 163162794 -87525060 + L1ME2 LINE L1 5955 6220 -338 2277 73 20 3 chr2 163162794 163162915 -87524939 + AluY SINE Alu 1 118 -193 603 0 0 0 chr2 163162915 163162982 -87524872 + (CA)n Simple_repeat Simple_repeat 2 68 0 2277 73 20 3 chr2 163162982 163163160 -87524694 + AluY SINE Alu 118 305 -6 2047 220 23 33 chr2 163163160 163163499 -87524355 + L1ME2 LINE L1 6220 6552 -6 369 328 80 67 chr2 163163532 163163983 -87523871 + HAL1 LINE L1 1152 1608 -899 915 218 43 28 chr2 163164233 163164444 -87523410 - MER20 DNA MER1_type -5 214 1 435 360 51 6 chr2 163164629 163164940 -87522914 + L1M4 LINE L1 4157 4481 -1665 1842 244 109 26 chr2 163164940 163165009 -87522845 + MER69 DNA AcHobo 1 63 -2463 2222 173 67 50 chr2 163165009 163165505 -87522349 + MLT1D LTR MaLR 1 504 -1 1842 244 109 26 chr2 163165505 163166014 -87521840 + MER69 DNA AcHobo 63 627 -1899 1087 174 93 20 chr2 163166237 163166512 -87521342 - MLT1D LTR MaLR -224 281 1 2222 115 0 0 chr2 163166631 163166935 -87520919 + AluSx SINE Alu 1 304 -8 899 214 99 92 chr2 163167107 163167329 -87520525 + L1MC5 LINE L1 6542 6761 -1200 1510 172 37 7 chr2 163167329 163167602 -87520252 + AluJb SINE Alu 1 281 -31 899 214 99 92 chr2 163167602 163168201 -87519653 + L1MC5 LINE L1 6761 7340 -621 25 90 0 0 chr2 163168223 163168290 -87519564 + AT_rich Low_complexity Low_complexity 1 67 0 2153 103 10 7 chr2 163168290 163168592 -87519262 + AluSg SINE Alu 1 303 -7 22 0 0 0 chr2 163169924 163169946 -87517908 + AT_rich Low_complexity Low_complexity 1 22 0 649 256 112 18 chr2 163169946 163170184 -87517670 - MIR SINE MIR 0 262 3 226 273 171 0 chr2 163170418 163170506 -87517348 - L2 LINE L2 -3 3310 3208 600 103 82 0 chr2 163170600 163170697 -87517157 + FLAM_A SINE Alu 23 127 -15 416 259 139 13 chr2 163171871 163171982 -87515872 - MER5B DNA MER1_type 0 178 40 192 111 0 0 chr2 163171982 163172018 -87515836 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 416 259 139 13 chr2 163172018 163172064 -87515790 - MER5B DNA MER1_type -138 40 1 1123 96 117 10 chr2 163172633 163172830 -87515024 + AluSx SINE Alu 1 218 -94 22 0 0 0 chr2 163173271 163173293 -87514561 + AT_rich Low_complexity Low_complexity 1 22 0 2222 98 19 3 chr2 163173492 163173799 -87514055 + AluSx SINE Alu 1 312 0 473 65 0 140 chr2 163173875 163173968 -87513886 + MADE1 DNA Mariner 1 80 0 893 218 109 0 chr2 163174108 163174319 -87513535 + MIR SINE MIR 29 262 0 1895 135 7 7 chr2 163174549 163174830 -87513024 + AluSx SINE Alu 24 304 -8 433 294 61 71 chr2 163175015 163175212 -87512642 + MIR SINE MIR 6 200 -62 1958 102 106 3 chr2 163176485 163176769 -87511085 + AluSq SINE Alu 1 313 0 1219 147 215 12 chr2 163178115 163178366 -87509488 - AluJb SINE Alu 0 302 1 192 347 123 42 chr2 163179358 163179643 -87508211 + L2 LINE L2 2807 3114 -158 4797 137 15 7 chr2 163181888 163183337 -87504517 + L1PA15 LINE L1 4586 6048 -117 576 239 7 45 chr2 163183440 163183595 -87504259 - MER5B DNA MER1_type -14 164 16 240 35 0 0 chr2 163183768 163183797 -87504057 + (TG)n Simple_repeat Simple_repeat 1 29 0 561 229 175 27 chr2 163184170 163184393 -87503461 - MER112 DNA MER1_type 0 256 1 187 236 111 28 chr2 163184458 163184530 -87503324 - MIR3 SINE MIR -4 204 127 200 94 31 0 chr2 163184983 163185015 -87502839 + (CA)n Simple_repeat Simple_repeat 2 34 0 261 0 0 0 chr2 163185665 163185694 -87502160 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 370 280 156 47 chr2 163189658 163189979 -87497875 + L1M2 LINE L1 1007 1362 -5487 25 0 0 0 chr2 163190802 163190827 -87497027 + GC_rich Low_complexity Low_complexity 1 25 0 190 188 0 31 chr2 163193120 163193184 -87494670 + A-rich Low_complexity Low_complexity 2 63 0 207 0 0 0 chr2 163193306 163193329 -87494525 + (TCCA)n Simple_repeat Simple_repeat 1 23 0 235 247 0 43 chr2 163193702 163193795 -87494059 + (CGGGG)n Simple_repeat Simple_repeat 3 91 0 372 279 93 97 chr2 163193858 163194478 -87493376 - L1M2 LINE L1 -5458 1391 600 30 0 0 0 chr2 163194478 163194508 -87493346 + GC_rich Low_complexity Low_complexity 1 30 0 372 279 93 97 chr2 163194508 163194579 -87493275 - L1M2 LINE L1 -6249 600 530 205 136 23 45 chr2 163195522 163195566 -87492288 - L2 LINE L2 -16 3256 3214 452 157 17 13 chr2 163195566 163195633 -87492221 - MIR SINE MIR -8 254 91 261 0 0 0 chr2 163196057 163196086 -87491768 + (TG)n Simple_repeat Simple_repeat 2 30 0 259 145 0 32 chr2 163197582 163197644 -87490210 + (GAA)n Simple_repeat Simple_repeat 2 61 0 21 36 0 0 chr2 163199200 163199228 -87488626 + GC_rich Low_complexity Low_complexity 1 28 0 375 23 0 0 chr2 163199892 163199936 -87487918 + (CA)n Simple_repeat Simple_repeat 2 45 0 192 77 0 0 chr2 163202840 163202866 -87484988 + (TG)n Simple_repeat Simple_repeat 2 27 0 402 259 27 75 chr2 163204340 163204487 -87483367 - MER5A DNA MER1_type -40 149 10 198 0 0 0 chr2 163205006 163205028 -87482826 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 274 301 43 0 chr2 163208372 163208465 -87479389 - 5S rRNA rRNA -19 102 6 297 255 196 0 chr2 163213680 163213782 -87474072 - L2 LINE L2 -1 3312 3191 1273 228 7 17 chr2 163213815 163214113 -87473741 + AluJo SINE Alu 1 295 -17 4161 161 92 7 chr2 163214474 163215315 -87472539 - L1MB5 LINE L1 0 6174 5263 207 0 0 0 chr2 163215358 163215381 -87472473 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1555 172 14 25 chr2 163215383 163215662 -87472192 - AluJb SINE Alu -30 282 7 365 243 0 19 chr2 163215666 163215773 -87472081 - L1MB5 LINE L1 -871 5275 5171 206 287 113 28 chr2 163215773 163215971 -87471883 - L2 LINE L2 -593 2721 2460 188 226 0 0 chr2 163216004 163216035 -87471819 - L2 LINE L2 -20 3293 3263 262 338 51 2 chr2 163216053 163216171 -87471683 - MIR SINE MIR -62 146 28 403 256 28 78 chr2 163216441 163216621 -87471233 + MLT1J LTR MaLR 1 171 -340 1366 164 27 19 chr2 163216621 163216877 -87470977 - Tigger2 DNA MER2_type 0 2718 2461 500 78 0 0 chr2 163216942 163217006 -87470848 - Tigger2 DNA MER2_type -1974 744 681 * 1266 196 44 32 chr2 163217003 163217179 -87470675 - Tigger2 DNA MER2_type -2398 320 137 1828 172 28 0 chr2 163217179 163217470 -87470384 + AluJb SINE Alu 2 300 -12 1266 196 44 32 chr2 163217470 163217609 -87470245 - Tigger2 DNA MER2_type -2581 137 1 831 243 108 52 chr2 163217609 163217897 -87469957 + MLT1J LTR MaLR 168 472 -39 26 82 0 0 chr2 163218273 163218334 -87469520 + AT_rich Low_complexity Low_complexity 1 61 0 24 0 0 98 chr2 163218409 163218435 -87469419 + AT_rich Low_complexity Low_complexity 1 21 -25 794 134 0 15 chr2 163218435 163218569 -87469285 + L1PB1 LINE L1 6019 6150 -1 24 0 0 98 chr2 163218569 163218593 -87469261 + AT_rich Low_complexity Low_complexity 21 46 0 208 250 0 0 chr2 163218667 163218707 -87469147 + MIR SINE MIR 223 262 0 233 276 61 33 chr2 163218786 163218967 -87468887 - L1MB5 LINE L1 -1577 4569 4384 21 57 0 0 chr2 163220375 163220410 -87467444 + AT_rich Low_complexity Low_complexity 1 35 0 334 389 125 20 chr2 163220523 163220894 -87466960 + L2 LINE L2 2349 2791 -523 2051 118 0 7 chr2 163220894 163221204 -87466650 + AluSx SINE Alu 1 308 0 334 389 125 20 chr2 163221204 163221342 -87466512 + L2 LINE L2 2791 2913 -401 2440 108 15 44 chr2 163221360 163221769 -87466085 - L1MA8 LINE L1 -275 6016 5620 345 238 0 38 chr2 163222029 163222109 -87465745 - MER5A DNA MER1_type -93 96 20 200 178 67 0 chr2 163222357 163222402 -87465452 + L2 LINE L2 3265 3312 -1 770 217 144 0 chr2 163222544 163222724 -87465130 + MER58A DNA MER1_type 1 206 -18 683 269 157 55 chr2 163223117 163223481 -87464373 + L2 LINE L2 2913 3313 0 379 272 112 0 chr2 163223551 163223676 -87464178 + MIR3 SINE MIR 69 207 -1 2142 113 17 3 chr2 163223752 163224052 -87463802 + AluSx SINE Alu 1 304 -8 1455 208 0 25 chr2 163226125 163226409 -87461445 + AluJo SINE Alu 1 277 -35 207 0 0 0 chr2 163226420 163226443 -87461411 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 943 120 0 0 chr2 163227994 163228127 -87459727 + FLAM_C SINE Alu 1 133 0 350 279 66 41 chr2 163228146 163228268 -87459586 - MIR SINE MIR -133 129 5 406 248 218 30 chr2 163228657 163228790 -87459064 - MER91A DNA MER1_type -35 161 4 277 311 58 10 chr2 163229595 163229698 -87458156 + MIR SINE MIR 37 144 -64 26 50 0 0 chr2 163230037 163230077 -87457777 + AT_rich Low_complexity Low_complexity 1 40 0 402 214 223 26 chr2 163230217 163230446 -87457408 - L1ME4a LINE L1 -12 6109 5836 25 0 0 0 chr2 163232675 163232700 -87455154 + AT_rich Low_complexity Low_complexity 1 25 0 204 102 61 0 chr2 163236747 163236796 -87451058 + (TA)n Simple_repeat Simple_repeat 1 52 0 503 265 0 37 chr2 163237744 163237880 -87449974 + MIR SINE MIR 2 132 -130 1199 272 87 12 chr2 163237999 163238400 -87449454 + LTR16B LTR ERVL 34 464 0 474 338 56 5 chr2 163239153 163239351 -87448503 - MIR SINE MIR -49 213 6 215 337 40 40 chr2 163239413 163239514 -87448340 + L2 LINE L2 3167 3267 -5 205 303 157 11 chr2 163240091 163240180 -87447674 + L2 LINE L2 3169 3270 -2 22 35 0 0 chr2 163241163 163241192 -87446662 + AT_rich Low_complexity Low_complexity 1 29 0 189 268 158 0 chr2 163241227 163241309 -87446545 - L2 LINE L2 -93 3220 3126 660 296 60 21 chr2 163241645 163241878 -87445976 - MIR SINE MIR -12 250 9 267 79 0 0 chr2 163241902 163241940 -87445914 + (TA)n Simple_repeat Simple_repeat 1 38 0 678 181 0 56 chr2 163242131 163242275 -87445579 - FLAM_C SINE Alu -7 136 1 21 36 0 0 chr2 163243696 163243724 -87444130 + AT_rich Low_complexity Low_complexity 1 28 0 371 352 53 44 chr2 163243926 163244153 -87443701 + MIR SINE MIR 20 248 -14 26 50 0 0 chr2 163244774 163244814 -87443040 + AT_rich Low_complexity Low_complexity 1 40 0 21 89 0 0 chr2 163244834 163244890 -87442964 + AT_rich Low_complexity Low_complexity 1 56 0 223 140 0 35 chr2 163246030 163246087 -87441767 + (GAAA)n Simple_repeat Simple_repeat 4 58 0 22 0 0 0 chr2 163246382 163246404 -87441450 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr2 163251601 163251636 -87436218 + (TG)n Simple_repeat Simple_repeat 2 36 0 1177 158 81 0 chr2 163252109 163252355 -87435499 + L1MA7 LINE L1 6026 6291 0 346 261 0 43 chr2 163252589 163252681 -87435173 + L2 LINE L2 3226 3313 0 1822 142 3 10 chr2 163252899 163253202 -87434652 - AluSx SINE Alu -11 301 1 3199 169 90 38 chr2 163253489 163254322 -87433532 + LTR1 LTR ERV1 1 785 0 1793 151 45 7 chr2 163254723 163255014 -87432840 - MER1B DNA MER1_type 0 339 38 321 282 65 78 chr2 163255234 163255620 -87432234 + HAL1b LINE L1 343 723 -625 839 152 15 0 chr2 163255814 163255946 -87431908 + AluJb SINE Alu 156 289 -23 22 0 0 0 chr2 163255946 163255968 -87431886 + AT_rich Low_complexity Low_complexity 1 22 0 313 301 87 20 chr2 163256019 163256215 -87431639 + L1MEc LINE L1 2160 2368 -4028 329 269 179 74 chr2 163256303 163256790 -87431064 - L1M4 LINE L1 -2283 3863 3326 1358 118 0 0 chr2 163257188 163257366 -87430488 + AluY SINE Alu 1 178 -133 2065 111 31 0 chr2 163257369 163257657 -87430197 + AluSx SINE Alu 1 297 -15 1061 138 19 0 chr2 163257673 163257832 -87430022 + FRAM SINE Alu 1 162 -4 1557 194 17 17 chr2 163258752 163259045 -87428809 + AluJb SINE Alu 1 293 -19 1447 117 10 0 chr2 163259164 163259361 -87428493 - AluSg SINE Alu -111 199 1 21 0 0 0 chr2 163261336 163261357 -87426497 + AT_rich Low_complexity Low_complexity 1 21 0 249 119 0 0 chr2 163262452 163262494 -87425360 + (GAAA)n Simple_repeat Simple_repeat 2 43 0 21 89 0 0 chr2 163262575 163262631 -87425223 + AT_rich Low_complexity Low_complexity 1 56 0 1122 175 21 5 chr2 163263564 163263758 -87424096 + AluJb SINE Alu 86 282 -30 25 0 0 0 chr2 163264047 163264072 -87423782 + AT_rich Low_complexity Low_complexity 1 25 0 772 206 34 17 chr2 163265655 163265830 -87422024 - MER5B DNA MER1_type 0 178 1 716 242 37 22 chr2 163266061 163266402 -87421452 + MLT1I LTR MaLR 16 409 0 939 125 74 0 chr2 163267653 163267829 -87420025 - MER53 DNA DNA 0 189 1 502 128 0 0 chr2 163268843 163268921 -87418933 + MADE1 DNA Mariner 2 79 -1 21 71 0 0 chr2 163269114 163269156 -87418698 + AT_rich Low_complexity Low_complexity 1 42 0 477 284 96 46 chr2 163269506 163269574 -87418280 - L1ME LINE L1 -391 5779 5716 968 212 52 0 chr2 163269574 163269786 -87418068 + MER58A DNA MER1_type 2 224 0 477 284 96 46 chr2 163269786 163269956 -87417898 - L1ME LINE L1 -454 5716 5529 250 228 163 0 chr2 163269981 163270104 -87417750 - L1ME LINE L1 -799 5347 5205 490 248 55 28 chr2 163270122 163270267 -87417587 + MIR SINE MIR 111 259 -3 565 205 49 8 chr2 163270584 163270706 -87417148 + FLAM_A SINE Alu 5 131 -2 3071 243 50 20 chr2 163270723 163271687 -87416167 + L1ME1 LINE L1 361 1378 -5343 676 268 157 32 chr2 163271769 163271841 -87416013 + L1ME1 LINE L1 1320 1382 -5158 1748 158 34 7 chr2 163271841 163272138 -87415716 + AluJb SINE Alu 1 305 -7 676 268 157 32 chr2 163272138 163272442 -87415412 + L1ME1 LINE L1 1382 1743 -4797 2025 114 0 56 chr2 163272463 163272787 -87415067 + AluJb SINE Alu 1 306 -6 1938 202 60 12 chr2 163272787 163273301 -87414553 + L1MB3 LINE L1 4790 5328 -818 579 195 122 18 chr2 163273299 163273463 -87414391 + L1ME1 LINE L1 2011 2191 -4530 * 1027 212 27 27 chr2 163273553 163273812 -87414042 + MLT1A1 LTR MaLR 107 365 0 1290 137 45 11 chr2 163273844 163274138 -87413716 + MER2 DNA MER2_type 2 339 -6 2743 148 43 32 chr2 163274142 163274181 -87413673 + L1MB3 LINE L1 5643 5680 -503 1966 150 0 0 chr2 163274181 163274475 -87413379 - AluSx SINE Alu -15 297 4 2743 148 43 32 chr2 163274475 163274970 -87412884 + L1MB3 LINE L1 5680 6183 0 1557 228 50 58 chr2 163275014 163275614 -87412240 + L1ME1 LINE L1 2254 2848 -3873 1187 212 50 20 chr2 163275593 163275895 -87411959 + L1ME1 LINE L1 4254 4564 -1976 * 1173 202 29 83 chr2 163275903 163276153 -87411701 + L1ME1 LINE L1 5296 5515 -1025 2185 96 3 13 chr2 163276153 163276466 -87411388 - AluY SINE Alu -1 310 1 1173 202 29 83 chr2 163276466 163276635 -87411219 + L1ME1 LINE L1 5515 5692 -848 395 309 67 56 chr2 163276711 163276996 -87410858 + L1M2 LINE L1 677 964 -5885 214 305 0 9 chr2 163277005 163277110 -87410744 + GA-rich Low_complexity Low_complexity 1 104 0 3164 218 50 16 chr2 163278525 163279371 -87408483 + L1ME1 LINE L1 5679 6552 -8 221 303 74 33 chr2 163280140 163280262 -87407592 - MIR3 SINE MIR -70 138 12 387 240 62 47 chr2 163280529 163280658 -87407196 + MIR SINE MIR 103 233 -29 2159 113 3 0 chr2 163281149 163281467 -87406387 + AluSx SINE Alu 1 319 0 364 228 228 21 chr2 163281612 163281757 -87406097 - Tigger8 DNA MER2_type -344 322 148 218 380 87 0 chr2 163282138 163282230 -87405624 - MIR SINE MIR -63 145 46 473 306 37 33 chr2 163282271 163282516 -87405338 + L1MC4a LINE L1 5618 5863 -1945 941 223 15 5 chr2 163282531 163282737 -87405117 - MER3 DNA MER1_type 0 209 2 739 110 55 55 chr2 163283162 163283289 -87404565 + FLAM_C SINE Alu 4 130 -3 266 226 38 0 chr2 163283493 163283546 -87404308 + MIR SINE MIR 92 146 -116 24 32 0 0 chr2 163283654 163283685 -87404169 + AT_rich Low_complexity Low_complexity 1 31 0 2007 132 3 14 chr2 163283685 163283973 -87403881 - AluSp SINE Alu -28 285 1 2259 97 7 0 chr2 163283973 163284272 -87403582 - AluSg SINE Alu -8 302 2 22 0 0 0 chr2 163285621 163285643 -87402211 + AT_rich Low_complexity Low_complexity 1 22 0 216 222 136 25 chr2 163286097 163286178 -87401676 + MIR SINE MIR 112 201 -61 2279 84 13 3 chr2 163286466 163286765 -87401089 + AluSg SINE Alu 1 302 -8 26 0 0 0 chr2 163287186 163287212 -87400642 + AT_rich Low_complexity Low_complexity 1 26 0 398 260 113 40 chr2 163288830 163288980 -87398874 + L2 LINE L2 2687 2847 -467 506 223 124 0 chr2 163289259 163289380 -87398474 - MER3 DNA MER1_type 0 209 74 * 760 219 77 0 chr2 163289366 163289535 -87398319 - MER3 DNA MER1_type -26 183 2 330 313 69 21 chr2 163289601 163289745 -87398109 - L1ME3A LINE L1 -230 5940 5790 315 349 46 5 chr2 163289752 163289947 -87397907 - L1ME3A LINE L1 -419 5751 5549 210 281 70 0 chr2 163289960 163290017 -87397837 - L2 LINE L2 -5 3308 3248 342 0 0 0 chr2 163290039 163290077 -87397777 + (CA)n Simple_repeat Simple_repeat 1 38 0 278 243 55 39 chr2 163290083 163290254 -87397600 - L1ME3A LINE L1 -721 5443 5344 269 282 97 0 chr2 163290509 163290612 -87397242 - MIR SINE MIR -30 232 120 3803 154 35 14 chr2 163290629 163291014 -87396840 - L1MB3 LINE L1 -9 6174 5799 1089 222 114 22 chr2 163291014 163291329 -87396525 - MER2 DNA MER2_type 0 344 1 3803 154 35 14 chr2 163291329 163291619 -87396235 - L1MB3 LINE L1 -384 5799 5481 180 0 0 0 chr2 163291619 163291639 -87396215 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3803 154 35 14 chr2 163291639 163291670 -87396184 - L1MB3 LINE L1 -702 5481 5452 2075 122 24 0 chr2 163291695 163291983 -87395871 + AluSx SINE Alu 3 297 -15 811 288 77 26 chr2 163291989 163292524 -87395330 - L1MB3 LINE L1 -1118 5028 4467 608 289 118 18 chr2 163293012 163293240 -87394614 - MLT1I LTR MaLR -131 278 28 180 111 0 0 chr2 163293376 163293403 -87394451 + (A)n Simple_repeat Simple_repeat 1 27 0 1993 143 3 0 chr2 163294348 163294642 -87393212 - AluSx SINE Alu -17 295 1 1918 154 0 0 chr2 163295334 163295620 -87392234 + AluSx SINE Alu 1 286 -26 1406 254 92 77 chr2 163295836 163296522 -87391332 + MER21B LTR ERV1 8 703 -160 189 103 0 0 chr2 163296766 163296795 -87391059 + L3 LINE CR1 1092 1120 -457 29 21 0 21 chr2 163296979 163297000 -87390854 + AT_rich Low_complexity Low_complexity 1 21 -25 2195 114 0 0 chr2 163297000 163297289 -87390565 + AluSx SINE Alu 3 291 -21 29 21 0 21 chr2 163297289 163297314 -87390540 + AT_rich Low_complexity Low_complexity 21 46 0 21 36 0 0 chr2 163298622 163298650 -87389204 + AT_rich Low_complexity Low_complexity 1 28 0 850 211 105 11 chr2 163300420 163300686 -87387168 - L1ME3A LINE L1 -28 6142 5852 21 57 0 0 chr2 163301413 163301448 -87386406 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr2 163301602 163301633 -87386221 + AT_rich Low_complexity Low_complexity 1 31 0 1748 206 103 25 chr2 163301782 163301880 -87385974 + Looper DNA T2_type 30 119 -1439 2375 77 7 7 chr2 163301880 163302190 -87385664 + AluSq SINE Alu 1 310 -3 1748 206 103 25 chr2 163302190 163302704 -87385150 + Looper DNA T2_type 119 690 -868 852 210 59 11 chr2 163302707 163302893 -87384961 - MER20 DNA MER1_type 0 219 25 2270 149 80 124 chr2 163302947 163303033 -87384821 + Looper DNA T2_type 695 783 -775 2666 171 21 46 chr2 163303033 163303641 -87384213 + L1MB5 LINE L1 5574 6166 -8 2270 149 80 124 chr2 163303641 163304015 -87383839 + Looper DNA T2_type 783 1172 -386 761 123 39 0 chr2 163304015 163304145 -87383709 + L1MB3 LINE L1 6039 6173 -10 2270 149 80 124 chr2 163304145 163304374 -87383480 + Looper DNA T2_type 1172 1399 -159 2143 129 0 0 chr2 163304374 163304669 -87383185 + AluSx SINE Alu 1 295 -17 2270 149 80 124 chr2 163304669 163304823 -87383031 + Looper DNA T2_type 1399 1558 0 660 280 92 23 chr2 163304834 163305052 -87382802 + MIR SINE MIR 29 261 -1 2293 107 0 0 chr2 163305580 163305878 -87381976 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr2 163306041 163306063 -87381791 + AT_rich Low_complexity Low_complexity 1 22 0 2107 97 59 0 chr2 163306109 163306398 -87381456 + AluSx SINE Alu 1 306 -6 1669 146 58 24 chr2 163306454 163306697 -87381157 + MER2 DNA MER2_type 5 263 -81 2083 99 20 26 chr2 163306697 163306999 -87380855 - AluSx SINE Alu -12 300 1 1669 146 58 24 chr2 163306999 163307083 -87380771 + MER2 DNA MER2_type 263 343 -1 495 299 145 14 chr2 163307206 163307413 -87380441 + MIR SINE MIR 29 262 0 184 296 167 0 chr2 163307437 163307491 -87380363 - MIR3 SINE MIR -18 190 128 1787 119 41 31 chr2 163307857 163308150 -87379704 - AluSg SINE Alu -14 296 1 189 0 0 0 chr2 163310806 163310827 -87377027 + (TTTTA)n Simple_repeat Simple_repeat 5 25 0 1012 168 34 103 chr2 163310848 163311110 -87376744 - AluJb SINE Alu -25 287 44 210 342 60 17 chr2 163311114 163311231 -87376623 + L2 LINE L2 2659 2780 -534 862 211 5 41 chr2 163311293 163311487 -87376367 + L1M4 LINE L1 559 745 -5797 258 67 283 0 chr2 163311493 163311553 -87376301 + MADE1 DNA Mariner 4 80 0 3432 221 36 72 chr2 163311553 163311753 -87376101 + L1M4 LINE L1 743 949 -5876 459 173 260 0 chr2 163311753 163311857 -87375997 + FLAM_A SINE Alu 1 131 -2 3432 221 36 72 chr2 163311857 163313500 -87374354 + L1M4 LINE L1 949 2676 -4149 1254 221 82 50 chr2 163313519 163313537 -87374317 - MER101 LTR ERV1 -12 462 446 1889 163 0 7 chr2 163313537 163313837 -87374017 + AluJb SINE Alu 1 298 -14 1254 221 82 50 chr2 163313837 163314257 -87373597 - MER101 LTR ERV1 -28 446 10 500 212 53 12 chr2 163314264 163314434 -87373420 + L1M4 LINE L1 2640 2816 -3828 * 1616 235 68 26 chr2 163314429 163315030 -87372824 + L1ME1 LINE L1 5547 6334 0 1771 160 14 7 chr2 163315528 163315821 -87372033 - AluSx SINE Alu -17 295 1 22 0 0 0 chr2 163316625 163316647 -87371207 + AT_rich Low_complexity Low_complexity 1 22 0 2105 145 0 0 chr2 163316956 163317259 -87370595 - AluSx SINE Alu -9 303 1 272 300 57 21 chr2 163317487 163317627 -87370227 + L2 LINE L2 2135 2279 -1035 902 251 97 22 chr2 163317627 163318060 -87369794 - L1MC/D LINE L1 -389 5773 5317 1686 146 19 65 chr2 163318322 163318631 -87369223 + AluJb SINE Alu 2 296 -16 1008 171 11 21 chr2 163319111 163319298 -87368556 - AluJb SINE Alu -6 306 122 180 285 123 64 chr2 163319328 163319563 -87368291 + L3b LINE CR1 1131 1379 -204 2036 144 7 3 chr2 163319575 163319880 -87367974 + AluJb SINE Alu 1 306 -6 642 185 8 31 chr2 163320088 163320218 -87367636 - FLAM_A SINE Alu -9 133 7 21 0 0 0 chr2 163320223 163320244 -87367610 + AT_rich Low_complexity Low_complexity 1 21 0 436 70 0 28 chr2 163320244 163320315 -87367539 - L1PA8 LINE L1 -6 6166 6098 3199 37 0 2 chr2 163320315 163320716 -87367138 + L1PA15 LINE L1 5399 5798 -356 1086 156 5 5 chr2 163320961 163321147 -87366707 + L1PA15 LINE L1 5978 6163 -2 2268 100 0 26 chr2 163321249 163321559 -87366295 + AluSx SINE Alu 1 302 -10 2271 93 0 3 chr2 163321564 163321855 -87365999 - AluSq SINE Alu -21 292 3 2064 120 0 28 chr2 163322515 163322844 -87365010 + AluSx SINE Alu 1 321 0 2195 97 0 0 chr2 163323350 163323648 -87364206 + AluSc SINE Alu 1 298 0 2273 110 0 7 chr2 163324298 163324606 -87363248 + AluSg SINE Alu 1 306 -4 407 148 114 34 chr2 163324886 163324974 -87362880 - Tigger7 DNA MER2_type 0 2491 2397 2488 181 17 11 chr2 163324987 163325450 -87362404 - Tigger7 DNA MER2_type -1965 522 57 277 188 116 0 chr2 163325528 163325597 -87362257 + MIR SINE MIR 137 213 -49 23 0 0 0 chr2 163325689 163325712 -87362142 + AT_rich Low_complexity Low_complexity 1 23 0 38852 66 12 2 chr2 163325714 163329521 -87358333 - L1PA5 LINE L1 -6 6148 2263 198 0 0 0 chr2 163329521 163329543 -87358311 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 38852 66 12 2 chr2 163329543 163331828 -87356026 - L1PA5 LINE L1 -3891 2263 1 1389 147 0 77 chr2 163331844 163332103 -87355751 - AluJo SINE Alu -30 282 44 2226 104 3 0 chr2 163332292 163332591 -87355263 - AluSc SINE Alu -9 300 1 296 273 45 0 chr2 163332752 163332862 -87354992 - HAL1 LINE L1 -863 1644 1530 234 240 0 60 chr2 163332867 163332967 -87354887 + T-rich Low_complexity Low_complexity 1 94 0 21 0 0 0 chr2 163333089 163333110 -87354744 + AT_rich Low_complexity Low_complexity 1 21 0 881 168 7 0 chr2 163333215 163333364 -87354490 - Tigger2 DNA MER2_type -23 2695 2546 815 229 6 0 chr2 163333364 163333521 -87354333 - FRAM SINE Alu -22 154 1 296 167 28 14 chr2 163333521 163333593 -87354261 + MLT1I LTR MaLR 326 398 -11 1095 288 92 27 chr2 163333684 163334003 -87353851 - LTR33 LTR ERVL -2 519 156 1376 116 74 5 chr2 163334003 163334218 -87353636 - MER30 DNA MER1_type 0 230 1 1095 288 92 27 chr2 163334218 163334385 -87353469 - LTR33 LTR ERVL -365 156 1 21 82 0 0 chr2 163334583 163334632 -87353222 + AT_rich Low_complexity Low_complexity 1 49 0 1320 122 19 24 chr2 163335154 163335359 -87352495 - AluSg/x SINE Alu -3 309 106 576 190 5 0 chr2 163335884 163336122 -87351732 - ACRO1 Satellite acromeric -5 239 1 449 17 17 0 chr2 163336543 163336601 -87351253 + (TG)n Simple_repeat Simple_repeat 1 59 0 207 0 0 0 chr2 163336643 163336666 -87351188 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 275 250 92 0 chr2 163337087 163337163 -87350691 + MER5A DNA MER1_type 105 187 -2 1286 227 178 7 chr2 163337409 163337863 -87349991 + MER21B LTR ERV1 199 730 -133 1800 110 65 0 chr2 163338049 163338339 -87349515 - L1PA10 LINE L1 0 6168 5860 248 254 0 0 chr2 163338720 163338775 -87349079 + Tigger5 DNA MER2_type 1 55 -2268 540 0 0 0 chr2 163339073 163339133 -87348721 + (GGAA)n Simple_repeat Simple_repeat 4 63 0 609 184 39 129 chr2 163339188 163339443 -87348411 + L1MB8 LINE L1 5839 6070 -108 1578 161 15 70 chr2 163339487 163339817 -87348037 - AluJo SINE Alu 0 312 1 1676 169 14 10 chr2 163339824 163340119 -87347735 - AluJo SINE Alu -12 300 5 1069 152 99 19 chr2 163340274 163340326 -87347528 + AluJo SINE Alu 85 131 -181 1785 185 0 0 chr2 163340326 163340624 -87347230 + AluJb SINE Alu 1 298 -14 1069 152 99 19 chr2 163340624 163340782 -87347072 + AluJo SINE Alu 131 312 0 423 170 30 0 chr2 163340782 163340882 -87346972 + GA-rich Low_complexity Low_complexity 2 104 0 1089 136 32 120 chr2 163341181 163341497 -87346357 + L1MA4 LINE L1 6006 6293 -7 25 90 0 0 chr2 163341498 163341565 -87346289 + AT_rich Low_complexity Low_complexity 1 67 0 1968 154 0 0 chr2 163341599 163341891 -87345963 - AluJb SINE Alu -20 292 1 2311 93 7 0 chr2 163341981 163342281 -87345573 + AluSg1 SINE Alu 1 302 -7 222 261 9 45 chr2 163342380 163342491 -87345363 + A-rich Low_complexity Low_complexity 2 108 0 2297 65 31 7 chr2 163342880 163343172 -87344682 - AluSx SINE Alu -13 299 1 254 313 17 43 chr2 163343456 163343571 -87344283 - MIR SINE MIR -143 119 8 1975 167 0 0 chr2 163344821 163345120 -87342734 + AluSx SINE Alu 1 299 -13 22 56 0 0 chr2 163345655 163345691 -87342163 + AT_rich Low_complexity Low_complexity 1 36 0 2118 113 0 20 chr2 163345852 163346154 -87341700 - AluSx SINE Alu -16 296 1 430 281 16 39 chr2 163346253 163346406 -87341448 - MER5A DNA MER1_type -1 188 29 25 31 0 0 chr2 163346574 163346606 -87341248 + AT_rich Low_complexity Low_complexity 1 32 0 260 273 30 0 chr2 163348273 163348339 -87339515 + L3 LINE CR1 1509 1576 -1 21 0 0 0 chr2 163348495 163348516 -87339338 + AT_rich Low_complexity Low_complexity 1 21 0 339 191 44 0 chr2 163349334 163349402 -87338452 - L1MB3 LINE L1 -85 6098 6028 2101 96 48 7 chr2 163350913 163351205 -87336649 + AluSq SINE Alu 1 304 -9 757 186 0 0 chr2 163353671 163353800 -87334054 + FLAM_A SINE Alu 1 129 -4 2276 110 3 0 chr2 163354274 163354574 -87333280 + AluSx SINE Alu 1 301 -11 1541 205 64 12 chr2 163355568 163355910 -87331944 + MLT1A1 LTR MaLR 5 364 -1 719 242 71 52 chr2 163355972 163356282 -87331572 - L1MC4a LINE L1 -1922 5886 5571 2370 161 31 5 chr2 163356347 163356762 -87331092 - MSTB LTR MaLR 0 426 1 26 50 0 0 chr2 163357042 163357082 -87330772 + AT_rich Low_complexity Low_complexity 1 40 0 1880 182 0 0 chr2 163357703 163358005 -87329849 + AluJo SINE Alu 3 304 -8 261 196 0 0 chr2 163358066 163358122 -87329732 + (CA)n Simple_repeat Simple_repeat 1 56 0 324 291 149 38 chr2 163358809 163359125 -87328729 - L3b LINE CR1 -130 1453 1103 2296 106 0 0 chr2 163359175 163359477 -87328377 + AluSx SINE Alu 1 302 -10 210 91 0 0 chr2 163359477 163359510 -87328344 + (TA)n Simple_repeat Simple_repeat 2 34 0 337 183 150 83 chr2 163360489 163360610 -87327244 + MLT1I LTR MaLR 282 533 -16 28 29 0 0 chr2 163361372 163361407 -87326447 + AT_rich Low_complexity Low_complexity 1 35 0 528 219 133 57 chr2 163361473 163361879 -87325975 + L1ME4a LINE L1 5685 6121 0 236 191 24 0 chr2 163362669 163362711 -87325143 - MER57A LTR ERV1 -66 337 295 21 36 0 0 chr2 163362711 163362739 -87325115 + AT_rich Low_complexity Low_complexity 1 28 0 2310 80 0 0 chr2 163362873 163363161 -87324693 + AluSg SINE Alu 1 288 -22 1650 123 47 11 chr2 163363162 163363438 -87324416 - L1MB3 LINE L1 -7 6176 5891 1009 154 0 0 chr2 163364248 163364404 -87323450 + AluJb SINE Alu 144 299 -13 271 152 0 0 chr2 163364456 163364502 -87323352 - AluSg SINE Alu -2 306 261 1675 96 0 5 chr2 163364502 163364720 -87323134 - AluSg SINE Alu -93 217 1 821 270 146 40 chr2 163364896 163365312 -87322542 + L1ME4a LINE L1 5288 5773 -348 2250 111 0 3 chr2 163365312 163365609 -87322245 + AluSx SINE Alu 1 296 -16 821 270 146 40 chr2 163365609 163365730 -87322124 + L1ME4a LINE L1 5773 5880 -241 1244 87 0 0 chr2 163365807 163365968 -87321886 + AluY SINE Alu 1 161 -150 247 61 0 0 chr2 163365969 163366002 -87321852 + L1ME4a LINE L1 6084 6116 -5 221 319 219 6 chr2 163367942 163368102 -87319752 + MIR SINE MIR 26 219 -43 21 0 0 0 chr2 163369283 163369304 -87318550 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr2 163371372 163371406 -87316448 + AT_rich Low_complexity Low_complexity 1 34 0 27 0 0 0 chr2 163372835 163372862 -87314992 + GC_rich Low_complexity Low_complexity 1 27 0 492 126 39 58 chr2 163373614 163373717 -87314137 - MER53 DNA DNA -88 101 1 210 37 0 0 chr2 163375104 163375131 -87312723 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 2218 92 0 0 chr2 163375132 163375413 -87312441 - AluSx SINE Alu -31 281 1 23 33 0 0 chr2 163378983 163379013 -87308841 + GC_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 163379106 163379129 -87308725 + GC_rich Low_complexity Low_complexity 1 23 0 243 261 11 22 chr2 163379130 163379222 -87308632 + GA-rich Low_complexity Low_complexity 1 91 0 33 0 0 0 chr2 163379507 163379540 -87308314 + AT_rich Low_complexity Low_complexity 1 33 0 396 0 0 0 chr2 163380947 163380991 -87306863 + (TG)n Simple_repeat Simple_repeat 1 44 0 28 61 0 0 chr2 163384004 163384053 -87303801 + AT_rich Low_complexity Low_complexity 1 49 0 23 68 0 0 chr2 163384210 163384254 -87303600 + AT_rich Low_complexity Low_complexity 1 44 0 30 0 0 0 chr2 163384593 163384623 -87303231 + AT_rich Low_complexity Low_complexity 1 30 0 1744 157 0 43 chr2 163384623 163384922 -87302932 - AluJo SINE Alu -26 286 1 24 32 0 0 chr2 163385607 163385638 -87302216 + AT_rich Low_complexity Low_complexity 1 31 0 619 332 113 58 chr2 163388347 163388981 -87298873 + L2 LINE L2 2451 3138 -134 3384 123 51 35 chr2 163388981 163389476 -87298378 - MER7C DNA MER2_type -2427 601 94 2300 78 3 14 chr2 163389476 163389772 -87298082 - AluSp SINE Alu -18 295 3 3384 123 51 35 chr2 163389772 163389868 -87297986 - MER7C DNA MER2_type -2934 94 1 619 332 113 58 chr2 163389868 163390007 -87297847 + L2 LINE L2 3138 3268 -4 871 256 64 20 chr2 163390378 163390628 -87297226 - MIR SINE MIR 0 262 2 682 124 25 41 chr2 163392686 163392807 -87295047 + FAM SINE Alu 1 45 -4 33 25 0 0 chr2 163393485 163393525 -87294329 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr2 163393957 163393985 -87293869 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 163394774 163394796 -87293058 + AT_rich Low_complexity Low_complexity 1 22 0 534 122 22 0 chr2 163395689 163395779 -87292075 + AluY SINE Alu 218 309 -2 2307 107 0 0 chr2 163397403 163397703 -87290151 - AluSq SINE Alu -13 300 1 22 35 0 0 chr2 163398671 163398700 -87289154 + AT_rich Low_complexity Low_complexity 1 29 0 532 180 153 0 chr2 163399099 163399210 -87288644 + FLAM_A SINE Alu 1 128 -5 568 233 0 8 chr2 163399356 163399476 -87288378 - FLAM_A SINE Alu -14 119 1 186 360 70 20 chr2 163399532 163399632 -87288222 - MIR SINE MIR -150 112 8 377 262 81 7 chr2 163400131 163400280 -87287574 - L1ME LINE L1 -5299 771 612 1003 296 87 31 chr2 163400333 163400393 -87287461 + L1ME LINE L1 21 76 -5994 405 0 0 0 chr2 163400393 163400438 -87287416 + (CA)n Simple_repeat Simple_repeat 2 46 0 1003 296 87 31 chr2 163400438 163400894 -87286960 + L1ME LINE L1 76 566 -5504 630 128 87 107 chr2 163400894 163401043 -87286811 + L1MC/D LINE L1 5563 5708 -534 5268 166 67 32 chr2 163402818 163402881 -87284973 + Charlie1a DNA MER1_type 1 60 -2701 1314 207 90 43 chr2 163402881 163403325 -87284529 + LTR40c LTR ERVL 1 465 0 5268 166 67 32 chr2 163403325 163404354 -87283500 + Charlie1a DNA MER1_type 60 1131 -324 2193 117 13 0 chr2 163404403 163404703 -87283151 - AluSq SINE Alu -9 304 1 2270 142 37 35 chr2 163404765 163405194 -87282660 + MSTB1 LTR MaLR 1 430 -2 2099 135 0 0 chr2 163405663 163405960 -87281894 + AluSx SINE Alu 1 297 -15 1630 86 0 0 chr2 163407305 163407514 -87280340 - AluSq SINE Alu -9 304 96 193 250 100 38 chr2 163407646 163407726 -87280128 + L2 LINE L2 3227 3311 -2 1166 199 100 6 chr2 163409065 163409503 -87278351 + MLT1F1 LTR MaLR 1 537 -30 22 0 0 0 chr2 163410575 163410597 -87277257 + AT_rich Low_complexity Low_complexity 1 22 0 186 310 0 17 chr2 163411881 163411939 -87275915 + L3 LINE CR1 78 134 -1443 720 120 0 0 chr2 163412111 163412211 -87275643 + AluSg/x SINE Alu 189 288 -21 180 0 0 0 chr2 163412215 163412235 -87275619 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 26 30 0 0 chr2 163412323 163412356 -87275498 + AT_rich Low_complexity Low_complexity 1 33 0 258 239 239 0 chr2 163412378 163412470 -87275384 - L1ME LINE L1 -396 5766 5653 222 250 0 19 chr2 163412617 163412669 -87275185 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 1472 202 34 14 chr2 163412689 163412981 -87274873 - AluJb SINE Alu -14 298 1 497 304 20 57 chr2 163414022 163414269 -87273585 - L1ME LINE L1 -382 5739 5502 2161 85 0 0 chr2 163415573 163415845 -87272009 + AluY SINE Alu 39 310 -1 488 255 138 7 chr2 163416962 163417107 -87270747 + L2 LINE L2 3108 3271 -1 541 89 0 0 chr2 163417139 163417218 -87270636 + MER41A LTR ERV1 388 466 -88 937 113 0 0 chr2 163418138 163418262 -87269592 - FLAM_C SINE Alu -19 124 1 206 247 101 45 chr2 163419283 163419372 -87268482 + MIR SINE MIR 81 174 -88 2574 205 47 80 chr2 163419471 163420138 -87267716 + MLT1A1-int LTR MaLR 1091 1735 0 1697 147 15 105 chr2 163420138 163420539 -87267315 + MLT1A1 LTR MaLR 1 365 0 526 223 64 128 chr2 163421088 163421216 -87266638 - MIR SINE MIR -27 235 129 1741 106 0 4 chr2 163421216 163421451 -87266403 - AluSq SINE Alu -79 234 1 526 223 64 128 chr2 163421451 163421573 -87266281 - MIR SINE MIR -133 129 1 1984 109 6 51 chr2 163421912 163422225 -87265629 - AluSq SINE Alu -14 299 1 216 284 53 21 chr2 163422393 163422488 -87265366 + L2 LINE L2 2736 2833 -481 436 264 51 51 chr2 163422660 163422857 -87264997 + L2 LINE L2 3113 3309 -4 1028 258 119 0 chr2 163424087 163424389 -87263465 + MLT1J LTR MaLR 1 338 -173 720 209 0 8 chr2 163424451 163424585 -87263269 - AluJo SINE Alu -178 134 2 217 261 58 14 chr2 163425189 163425258 -87262596 + MIR SINE MIR 104 175 -87 398 260 199 7 chr2 163425764 163425910 -87261944 - L2 LINE L2 -955 2359 2186 2072 114 21 0 chr2 163425936 163426226 -87261628 + AluSx SINE Alu 1 296 -16 552 266 153 52 chr2 163426324 163426553 -87261301 + MIR SINE MIR 7 258 -4 4093 189 50 7 chr2 163427118 163428222 -87259632 - L1MB3 LINE L1 -85 6098 4954 6756 207 49 32 chr2 163428226 163428909 -87258945 - L1MB3 LINE L1 -745 5401 4731 999 210 148 66 chr2 163428909 163429275 -87258579 - MSTD LTR MaLR 0 396 1 6756 207 49 32 chr2 163429275 163430568 -87257286 - L1MB3 LINE L1 -1415 4731 2969 1687 171 10 19 chr2 163430568 163430878 -87256976 - AluJb SINE Alu -3 309 3 6756 207 49 32 chr2 163430878 163431582 -87256272 - L1MB3 LINE L1 -3177 2969 2278 463 314 91 15 chr2 163431606 163431822 -87256032 - L2 LINE L2 -311 3002 2774 950 125 5 103 chr2 163431823 163432007 -87255847 - FRAM SINE Alu -17 159 1 381 206 103 79 chr2 163432014 163432140 -87255714 - L2 LINE L2 -532 2782 2654 2543 32 0 3 chr2 163432153 163432462 -87255392 - L1PA2 LINE L1 -5 6150 5843 620 342 76 21 chr2 163432552 163432935 -87254919 + L2 LINE L2 1730 2133 -1181 190 315 83 55 chr2 163433046 163433335 -87254519 + L2 LINE L2 2155 2451 -863 215 225 22 22 chr2 163433515 163433604 -87254250 + (TA)n Simple_repeat Simple_repeat 1 89 0 219 323 0 0 chr2 163433644 163433706 -87254148 + L2 LINE L2 3242 3303 -10 280 349 0 0 chr2 163434196 163434279 -87253575 + L2 LINE L2 3227 3309 -4 4340 176 34 62 chr2 163434961 163435848 -87252006 + MER21A LTR ERV1 1 862 -69 21 0 0 0 chr2 163435885 163435906 -87251948 + AT_rich Low_complexity Low_complexity 1 21 0 387 178 27 0 chr2 163435982 163436055 -87251799 + MER21A LTR ERV1 857 931 0 1240 240 121 60 chr2 163436144 163436223 -87251631 + MER68 LTR ERV1 1 74 -488 1719 138 126 69 chr2 163436223 163436575 -87251279 + MSTA LTR MaLR 1 380 -48 2099 142 3 0 chr2 163436575 163436885 -87250969 - AluSq SINE Alu -2 311 1 1719 138 126 69 chr2 163436885 163436937 -87250917 + MSTA LTR MaLR 380 428 0 1240 240 121 60 chr2 163436937 163437387 -87250467 + MER68 LTR ERV1 74 562 0 21 57 0 0 chr2 163437973 163438008 -87249846 + AT_rich Low_complexity Low_complexity 1 35 0 4344 189 37 10 chr2 163439347 163440632 -87247222 - L1MB7 LINE L1 -19 6165 4843 230 259 119 76 chr2 163441209 163441394 -87246460 + MIR3 SINE MIR 13 205 -3 254 327 65 9 chr2 163442782 163442889 -87244965 - L2 LINE L2 -6 3307 3195 284 265 0 0 chr2 163443945 163444013 -87243841 + MLT1J LTR MaLR 13 80 -431 225 290 19 37 chr2 163444575 163444682 -87243172 - L2 LINE L2 -223 3049 2945 335 280 96 8 chr2 163444798 163444923 -87242931 + MER91C DNA MER1_type 1 136 -4 438 314 116 34 chr2 163444935 163445288 -87242566 - L2 LINE L2 -495 2819 2438 249 287 0 69 chr2 163445275 163445376 -87242478 - MER5A DNA MER1_type -90 99 6 * 194 273 0 36 chr2 163447208 163447263 -87240591 + MIR SINE MIR 82 134 -128 215 290 65 32 chr2 163447303 163447396 -87240458 - MER5B DNA MER1_type 0 178 83 369 254 45 110 chr2 163448085 163448289 -87239565 - MIR SINE MIR -50 212 15 3104 232 145 21 chr2 163448294 163449199 -87238655 - HAL1 LINE L1 0 2507 1419 2033 117 0 4 chr2 163449199 163449473 -87238381 - AluSx SINE Alu -39 273 1 3104 232 145 21 chr2 163449473 163449753 -87238101 - HAL1 LINE L1 -1088 1419 1175 1219 201 82 75 chr2 163449792 163450100 -87237754 + LTR56 LTR ERV1 14 318 -127 2264 80 0 7 chr2 163450100 163450389 -87237465 + AluY SINE Alu 1 287 -24 207 0 0 0 chr2 163450392 163450415 -87237439 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1219 201 82 75 chr2 163450415 163450530 -87237324 + LTR56 LTR ERV1 319 444 -1 843 160 6 61 chr2 163451200 163451381 -87236473 - FRAM SINE Alu -2 174 4 189 0 0 0 chr2 163452963 163452984 -87234870 + (A)n Simple_repeat Simple_repeat 1 21 0 619 130 0 19 chr2 163453196 163453304 -87234550 + L1MB2 LINE L1 6065 6170 -1 492 274 140 33 chr2 163454768 163455162 -87232692 + L1M4 LINE L1 3520 3955 -2191 294 278 62 38 chr2 163455307 163455516 -87232338 + L1M4 LINE L1 3952 4165 -1981 24 0 0 0 chr2 163455564 163455588 -87232266 + AT_rich Low_complexity Low_complexity 1 24 0 468 341 100 23 chr2 163455728 163456159 -87231695 + L1M4 LINE L1 4675 5138 -1008 298 219 0 42 chr2 163457695 163457791 -87230063 + (CCCCG)n Simple_repeat Simple_repeat 3 94 0 333 351 54 30 chr2 163457937 163458105 -87229749 - MER5A DNA MER1_type -16 173 2 701 164 16 8 chr2 163458623 163458751 -87229103 - L1MC1 LINE L1 -8 6325 6197 2809 118 39 16 chr2 163458760 163459327 -87228527 - L1MC/D LINE L1 -622 5711 5135 726 162 8 0 chr2 163459845 163459962 -87227892 + FLAM_C SINE Alu 1 118 -15 27 29 0 0 chr2 163459962 163459996 -87227858 + AT_rich Low_complexity Low_complexity 1 34 0 2164 113 0 0 chr2 163460043 163460327 -87227527 + AluSx SINE Alu 4 287 -25 307 303 97 21 chr2 163460602 163460747 -87227107 + MER91A DNA MER1_type 41 196 0 211 387 110 19 chr2 163462057 163462212 -87225642 - L2 LINE L2 0 3272 3104 233 300 129 34 chr2 163462319 163462669 -87225185 + HAL1b LINE L1 348 730 -618 28 48 0 0 chr2 163462719 163462761 -87225093 + AT_rich Low_complexity Low_complexity 1 42 0 2067 133 0 0 chr2 163462990 163463276 -87224578 + AluSx SINE Alu 12 297 -15 265 353 115 0 chr2 163464066 163464188 -87223666 + MIR SINE MIR 5 140 -122 1948 138 3 3 chr2 163464312 163464602 -87223252 - AluJb SINE Alu -6 306 17 1010 213 26 10 chr2 163464681 163465167 -87222687 + L1MB5 LINE L1 1137 1705 -4941 433 242 0 0 chr2 163465165 163465256 -87222598 - L1M4 LINE L1 -5327 1215 1125 * 184 259 0 19 chr2 163465336 163465390 -87222464 - L2 LINE L2 -2 3311 3259 11368 222 30 12 chr2 163465431 163467133 -87220721 + L1MB5 LINE L1 1699 3369 -3303 2061 125 33 13 chr2 163467133 163467437 -87220417 + AluSx SINE Alu 1 310 -2 11368 222 30 12 chr2 163467437 163470254 -87217600 + L1MB5 LINE L1 3369 6402 -270 27190 133 13 19 chr2 163470254 163476700 -87211154 + L1PA8 LINE L1 5 6486 -1 1519 179 18 0 chr2 163476701 163476975 -87210879 + L1MB5 LINE L1 6394 6672 0 1030 161 9 19 chr2 163476990 163477201 -87210653 + L1MC2 LINE L1 6127 6335 -9 408 297 80 34 chr2 163477219 163477472 -87210382 + L1M4 LINE L1 2876 3151 -2995 473 320 83 51 chr2 163477534 163478003 -87209851 + L1M4 LINE L1 3254 3737 -2409 449 257 40 20 chr2 163478716 163478864 -87208990 + L1M4 LINE L1 4015 4165 -1981 2086 116 28 0 chr2 163480047 163480332 -87207522 - AluSq SINE Alu -20 293 1 25 0 0 0 chr2 163480591 163480616 -87207238 + AT_rich Low_complexity Low_complexity 1 25 0 846 136 0 0 chr2 163480664 163480782 -87207072 - FLAM_C SINE Alu -15 118 1 183 42 0 0 chr2 163481281 163481305 -87206549 + (CAA)n Simple_repeat Simple_repeat 2 25 0 506 267 86 12 chr2 163481766 163481947 -87205907 - MIR3 SINE MIR -13 195 3 257 320 154 46 chr2 163481952 163482127 -87205727 - MIR3 SINE MIR -12 196 3 1902 89 75 169 chr2 163483870 163484284 -87203570 - Tigger2 DNA MER2_type -59 2659 1 316 331 161 24 chr2 163484285 163484409 -87203445 - L2 LINE L2 -4 3268 3128 1834 162 13 22 chr2 163484726 163485040 -87202814 - AluJo SINE Alu 0 312 2 3825 106 65 2 chr2 163485182 163485767 -87202087 - L1PA13 LINE L1 -57 6106 5485 481 290 233 69 chr2 163485880 163486550 -87201304 + L3 LINE CR1 725 1504 -73 737 264 101 0 chr2 163486567 163486794 -87201060 - MIR SINE MIR 0 262 13 1731 99 121 7 chr2 163486917 163487189 -87200665 - AluSg1 SINE Alu -4 305 3 1740 153 27 30 chr2 163487390 163487724 -87200130 + THE1C LTR MaLR 43 375 0 183 290 32 0 chr2 163488956 163489018 -87198836 - MIR SINE MIR -120 142 79 272 280 30 21 chr2 163489398 163489555 -87198299 + MIR SINE MIR 9 237 -25 2308 106 0 3 chr2 163489637 163489939 -87197915 + AluSx SINE Alu 1 301 -11 27 0 0 0 chr2 163490366 163490393 -87197461 + AT_rich Low_complexity Low_complexity 1 27 0 1921 132 0 41 chr2 163490394 163490689 -87197165 - AluSx SINE Alu -27 285 3 493 231 38 56 chr2 163490691 163490851 -87197003 + MLT1L LTR MaLR 449 605 -10 217 323 219 0 chr2 163490901 163490997 -87196857 - MIR SINE MIR -1 261 145 387 0 0 0 chr2 163491103 163491146 -87196708 + (TG)n Simple_repeat Simple_repeat 1 43 0 655 233 16 0 chr2 163491349 163491478 -87196376 - FAM SINE Alu -54 131 1 445 190 16 33 chr2 163491912 163492033 -87195821 - LTR41 LTR ERVL -6 767 649 695 244 28 15 chr2 163492394 163492604 -87195250 - LTR41 LTR ERVL -555 240 1 1486 196 22 104 chr2 163493416 163493830 -87194024 - MLT1B LTR MaLR -10 380 1 500 245 175 7 chr2 163495997 163496140 -87191714 + MER5A DNA MER1_type 13 179 -10 513 263 0 53 chr2 163496521 163496673 -87191181 - MER5B DNA MER1_type -17 161 18 376 247 280 5 chr2 163497180 163497366 -87190488 - MIR SINE MIR -6 256 20 1564 216 10 10 chr2 163497433 163497739 -87190115 - AluJo SINE Alu -6 306 1 1844 191 92 27 chr2 163498179 163498674 -87189180 + MER39 LTR ERV1 1 707 0 399 293 111 11 chr2 163500583 163500764 -87187090 - L1ME4a LINE L1 -199 5922 5724 219 276 9 86 chr2 163500961 163501066 -87186788 + MER5A DNA MER1_type 3 99 -90 * 407 286 9 18 chr2 163500981 163501093 -87186761 - MER5A DNA MER1_type -5 184 74 198 348 35 26 chr2 163501800 163501915 -87185939 - MIR SINE MIR -71 191 76 1996 224 38 5 chr2 163501990 163502437 -87185417 + LTR40b LTR ERVL 1 462 0 394 303 45 45 chr2 163504316 163504448 -87183406 + L2 LINE L2 3141 3272 0 2229 107 10 0 chr2 163505504 163505812 -87182042 - AluSp SINE Alu -2 311 1 22 0 0 0 chr2 163507254 163507276 -87180578 + AT_rich Low_complexity Low_complexity 1 22 0 260 303 33 92 chr2 163507424 163507576 -87180278 - MIR SINE MIR -50 212 70 2000 118 4 7 chr2 163507861 163508141 -87179713 - AluSg SINE Alu -31 279 1 348 176 0 0 chr2 163508200 163508268 -87179586 + (TG)n Simple_repeat Simple_repeat 1 68 0 522 300 25 92 chr2 163508688 163509015 -87178839 - L2 LINE L2 -1 3312 3008 1543 142 101 51 chr2 163509164 163509559 -87178295 - Charlie1 DNA MER1_type -4 2757 2343 726 183 57 51 chr2 163510026 163510201 -87177653 + MER69A DNA AcHobo 1 176 -1 761 138 0 0 chr2 163510580 163510710 -87177144 - L1M3 LINE L1 -721 5447 5318 347 381 31 35 chr2 163511029 163511289 -87176565 + L2 LINE L2 2545 2803 -511 212 330 110 17 chr2 163511374 163511492 -87176362 + L2 LINE L2 3184 3312 -1 259 197 45 0 chr2 163511677 163511743 -87176111 + (TTATA)n Simple_repeat Simple_repeat 5 73 0 207 0 0 0 chr2 163512275 163512298 -87175556 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2313 90 0 0 chr2 163513056 163513345 -87174509 - AluSg SINE Alu -21 289 1 236 299 24 79 chr2 163514026 163514153 -87173701 - MER5A DNA MER1_type -1 188 69 32 0 0 0 chr2 163514153 163514185 -87173669 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 163515543 163515572 -87172282 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 0 0 chr2 163516876 163516897 -87170957 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 8419 83 16 1 chr2 163518266 163520204 -87167650 + L1PA7 LINE L1 4185 6146 -8 1694 170 3 24 chr2 163520586 163520880 -87166974 - AluJb SINE Alu -24 288 1 633 163 163 22 chr2 163520883 163521018 -87166836 - FAM SINE Alu -9 40 1 202 182 0 0 chr2 163521220 163521253 -87166601 + polypyrimidine Low_complexity Low_complexity 3 35 0 189 181 28 125 chr2 163521435 163521507 -87166347 - L3b LINE CR1 -246 1337 1273 21 0 0 0 chr2 163522200 163522221 -87165633 + AT_rich Low_complexity Low_complexity 1 21 0 335 259 37 0 chr2 163522911 163523019 -87164835 - L1ME4a LINE L1 -41 6080 5969 598 265 172 9 chr2 163523195 163523410 -87164444 + MLT1J LTR MaLR 1 250 -261 452 249 189 0 chr2 163523768 163524001 -87163853 - L1ME4a LINE L1 -264 5857 5581 803 181 6 31 chr2 163524270 163524430 -87163424 - FRAM SINE Alu -22 154 1 756 189 7 13 chr2 163524936 163525116 -87162738 + L1ME2 LINE L1 5695 5881 -285 352 222 111 0 chr2 163525090 163525171 -87162683 - L1ME3 LINE L1 -225 5937 5848 * 685 281 0 13 chr2 163525171 163525324 -87162530 - MER63A DNA MER1_type -9 201 51 630 205 0 16 chr2 163525353 163525480 -87162374 - L1ME3 LINE L1 -453 5711 5587 1960 164 49 0 chr2 163525632 163525980 -87161874 + MLT1A1 LTR MaLR 1 365 0 458 221 12 0 chr2 163526012 163526098 -87161756 - L2 LINE L2 0 3272 3186 212 0 36 0 chr2 163526602 163526630 -87161224 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 211 189 0 0 chr2 163526838 163526875 -87160979 - MIR SINE MIR -109 153 117 1006 191 0 0 chr2 163529523 163529701 -87158153 - MER5B DNA MER1_type 0 178 1 231 273 71 40 chr2 163530848 163530947 -87156907 - MIR3 SINE MIR -31 177 76 186 43 0 0 chr2 163530947 163530970 -87156884 + (T)n Simple_repeat Simple_repeat 1 23 0 354 231 31 51 chr2 163531139 163531334 -87156520 + L1ME4a LINE L1 5681 5871 -250 259 290 0 0 chr2 163531704 163531773 -87156081 + L2 LINE L2 2291 2359 -955 614 330 17 13 chr2 163531841 163532074 -87155780 + L2 LINE L2 2598 2831 -483 381 350 104 27 chr2 163532120 163532340 -87155514 + L2 LINE L2 2989 3225 -47 1021 285 97 14 chr2 163532543 163532964 -87154890 + MLT1L LTR MaLR 142 597 -18 147 0 0 0 chr2 163533337 163533484 -87154370 + AT_rich Low_complexity Low_complexity 1 147 0 491 295 118 22 chr2 163533522 163533929 -87153925 - L1ME4a LINE L1 -33 6088 5643 230 275 100 40 chr2 163533945 163534294 -87153560 - L1ME4a LINE L1 -1320 4826 4457 23 0 0 0 chr2 163535128 163535151 -87152703 + AT_rich Low_complexity Low_complexity 1 23 0 7055 52 12 2 chr2 163535715 163536656 -87151198 + L1PA7 LINE L1 5204 6153 -1 817 81 0 0 chr2 163536662 163536773 -87151081 + L1P3 LINE L1 5476 5586 -586 1282 38 6 0 chr2 163536773 163536925 -87150929 + L1PA8 LINE L1 6013 6170 -2 23 0 0 0 chr2 163536965 163536988 -87150866 + AT_rich Low_complexity Low_complexity 1 23 0 1202 226 122 28 chr2 163537168 163537245 -87150609 + MSTD LTR MaLR 1 69 -327 1703 155 45 21 chr2 163537245 163537535 -87150319 + AluSx SINE Alu 1 297 -15 1202 226 122 28 chr2 163537535 163537819 -87150035 + MSTD LTR MaLR 69 396 0 491 225 238 19 chr2 163538846 163539006 -87148848 + MIR SINE MIR 68 262 0 257 371 138 40 chr2 163539442 163539545 -87148309 + L2 LINE L2 607 698 -2616 1771 168 52 29 chr2 163539545 163539926 -87147928 + MLT1B LTR MaLR 1 390 0 257 371 138 40 chr2 163539926 163540769 -87147085 + L2 LINE L2 698 1646 -1668 1985 118 35 0 chr2 163540913 163541201 -87146653 - AluSx SINE Alu -14 298 1 258 309 31 0 chr2 163541202 163541299 -87146555 - MIR SINE MIR -39 223 124 463 252 203 0 chr2 163541361 163541504 -87146350 - MIR SINE MIR -50 212 41 576 275 52 20 chr2 163541575 163541787 -87146067 + MIR SINE MIR 13 224 -38 1217 138 60 0 chr2 163541809 163542026 -87145828 + MER30 DNA MER1_type 1 230 0 2086 235 128 17 chr2 163542186 163542782 -87145072 + Zaphod DNA AcHobo 2 663 -3368 2880 193 57 21 chr2 163542787 163543504 -87144350 + Zaphod DNA AcHobo 3289 4031 0 1098 158 24 49 chr2 163543560 163543872 -87143982 - MER2 DNA MER2_type 0 345 1 3495 121 6 0 chr2 163543891 163544435 -87143419 - L1PA8 LINE L1 -1299 4847 4301 6767 73 7 1 chr2 163544441 163545737 -87142117 + L1PA8 LINE L1 4857 6158 -14 208 307 133 0 chr2 163545864 163545939 -87141915 + L2 LINE L2 3009 3093 -179 213 387 0 38 chr2 163545999 163546105 -87141749 + MIR SINE MIR 48 149 -113 189 171 0 0 chr2 163546501 163546536 -87141318 + GA-rich Low_complexity Low_complexity 2 36 0 673 235 48 46 chr2 163546757 163547126 -87140728 - MLT1I LTR MaLR 0 409 7 228 146 0 0 chr2 163548249 163548290 -87139564 - L1ME4a LINE L1 -106 6015 5975 189 154 0 0 chr2 163548312 163548351 -87139503 + T-rich Low_complexity Low_complexity 1 39 0 2190 122 0 22 chr2 163548353 163548672 -87139182 - AluSx SINE Alu 0 312 1 554 310 41 4 chr2 163548727 163548995 -87138859 - L1MC4a LINE L1 -1919 5889 5612 222 118 0 0 chr2 163550568 163550602 -87137252 + (TG)n Simple_repeat Simple_repeat 1 34 0 232 351 35 35 chr2 163550698 163550812 -87137042 - L2 LINE L2 -167 3105 2992 599 330 45 9 chr2 163550986 163551210 -87136644 - MIR SINE MIR -7 255 24 619 227 32 7 chr2 163551320 163551474 -87136380 + MER106B DNA MER1_type 902 1059 0 227 193 102 91 chr2 163551474 163551562 -87136292 - MIR3 SINE MIR -48 160 72 2167 112 7 3 chr2 163552575 163552871 -87134983 + AluSx SINE Alu 1 297 -15 488 317 38 0 chr2 163552978 163553218 -87134636 - L1MC4a LINE L1 -2197 5611 5363 28 29 0 0 chr2 163553358 163553393 -87134461 + AT_rich Low_complexity Low_complexity 1 35 0 379 192 13 0 chr2 163553896 163553974 -87133880 - MER116 DNA Mariner 0 80 2 207 0 0 0 chr2 163555493 163555516 -87132338 + (A)n Simple_repeat Simple_repeat 1 23 0 186 171 0 24 chr2 163555814 163555855 -87131999 + L2 LINE L2 3274 3313 0 1837 172 37 30 chr2 163556260 163556815 -87131039 - MLT2A2 LTR ERVL 0 554 1 535 278 112 10 chr2 163559078 163559283 -87128571 - MIR SINE MIR -10 252 27 2324 107 3 0 chr2 163559708 163560006 -87127848 + AluSp SINE Alu 1 299 -14 3407 79 17 0 chr2 163560803 163561285 -87126569 + L1PA10 LINE L1 5375 5864 -304 2131 174 12 5 chr2 163561291 163561706 -87126148 - LTR10E LTR ERV1 -43 590 173 594 85 21 0 chr2 163561732 163561826 -87126028 - LTR10E LTR ERV1 -537 96 1 2063 105 16 7 chr2 163561828 163562134 -87125720 + L1PA10 LINE L1 5850 6158 -10 649 184 146 0 chr2 163562154 163562312 -87125542 - MER3 DNA MER1_type -24 185 5 695 281 45 49 chr2 163562328 163562574 -87125280 - MIR SINE MIR -2 260 16 181 329 76 32 chr2 163562844 163563002 -87124852 + L2 LINE L2 1527 1691 -1623 209 280 178 9 chr2 163563202 163563309 -87124545 + L2 LINE L2 3180 3304 -9 2021 113 46 0 chr2 163563453 163563735 -87124119 - AluSx SINE Alu -17 295 1 2743 148 30 53 chr2 163563780 163564386 -87123468 + Ricksha DNA DNA 2640 3231 -23 283 363 68 49 chr2 163564723 163565133 -87122721 + L2 LINE L2 2334 2751 -563 202 310 93 97 chr2 163565322 163565632 -87122222 + L2 LINE L2 2957 3265 -7 1073 208 148 67 chr2 163566121 163566553 -87121301 + MLT1D LTR MaLR 31 497 -8 330 344 32 16 chr2 163566667 163566792 -87121062 - L2 LINE L2 -9 3304 3178 322 294 36 67 chr2 163566805 163566999 -87120855 - L2 LINE L2 -213 3059 2872 1477 189 63 30 chr2 163569789 163570091 -87117763 - AluJb SINE Alu 0 312 1 871 227 0 0 chr2 163570684 163570847 -87117007 - FRAM SINE Alu -3 163 1 1880 227 43 63 chr2 163571154 163571752 -87116102 - MLT1E2 LTR MaLR -4 622 37 917 238 183 55 chr2 163572290 163572640 -87115214 - L2 LINE L2 -1 3312 2894 949 48 56 0 chr2 163572640 163572766 -87115088 + L1PB1 LINE L1 6017 6149 -2 917 238 183 55 chr2 163572766 163572852 -87115002 - L2 LINE L2 -419 2894 2820 752 276 22 0 chr2 163574027 163574212 -87113642 + MIR SINE MIR 62 250 -12 423 263 51 44 chr2 163575401 163575538 -87112316 + MIR SINE MIR 7 144 -118 183 42 0 0 chr2 163576494 163576518 -87111336 + (TG)n Simple_repeat Simple_repeat 2 25 0 1631 186 7 0 chr2 163577011 163577291 -87110563 + AluJo SINE Alu 1 282 -30 734 256 11 0 chr2 163578199 163578379 -87109475 - MIR SINE MIR -5 257 76 207 367 13 0 chr2 163578504 163578583 -87109271 + MER5A DNA MER1_type 105 184 -5 536 223 69 0 chr2 163578751 163578881 -87108973 + MER117 DNA MER1_type 30 168 -29 212 0 36 0 chr2 163579466 163579494 -87108360 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 248 208 104 0 chr2 163579773 163579850 -87108004 + MIR SINE MIR 117 201 -61 270 297 91 48 chr2 163581980 163582068 -87105786 + MIR3 SINE MIR 34 117 -91 3806 102 13 48 chr2 163582068 163582678 -87105176 + L1PA14 LINE L1 5564 6152 -9 270 297 91 48 chr2 163582678 163582754 -87105100 + MIR3 SINE MIR 117 205 -3 1232 265 66 48 chr2 163583840 163584383 -87103471 + LTR67 LTR ERVL 5 557 0 205 277 24 60 chr2 163584386 163584469 -87103385 - L2 LINE L2 -93 3220 3141 2009 154 7 0 chr2 163584916 163585222 -87102632 - AluSx SINE Alu -4 308 1 21 0 0 0 chr2 163585364 163585385 -87102469 + AT_rich Low_complexity Low_complexity 1 21 0 573 285 18 53 chr2 163585610 163585838 -87102016 - MIR SINE MIR -31 231 12 451 248 43 21 chr2 163585904 163586045 -87101809 + MIR SINE MIR 69 212 -50 321 311 10 29 chr2 163586649 163586752 -87101102 + L2 LINE L2 2693 2793 -521 402 293 127 13 chr2 163586771 163586928 -87100926 + MLT1K LTR MaLR 84 258 -330 403 282 128 13 chr2 163586958 163587114 -87100740 + MLT1K LTR MaLR 85 258 -330 374 271 30 36 chr2 163587118 163587284 -87100570 + MLT1K LTR MaLR 424 588 0 211 278 160 65 chr2 163587290 163587650 -87100204 + L2 LINE L2 2796 3193 -79 1454 130 99 50 chr2 163588089 163588412 -87099442 - MER44D DNA MER2_type 0 609 1 210 313 62 0 chr2 163588433 163588513 -87099341 + L2 LINE L2 1819 1903 -1411 843 316 99 54 chr2 163588543 163589289 -87098565 + L2 LINE L2 2124 2903 -411 339 261 96 9 chr2 163589332 163589447 -87098407 + L2 LINE L2 2967 3091 -181 231 254 0 0 chr2 163589604 163589663 -87098191 - MLT1H1 LTR MaLR -16 539 481 1938 176 29 3 chr2 163589668 163590048 -87097806 + L1M4 LINE L1 5392 5781 -393 14095 119 28 27 chr2 163590052 163590149 -87097705 - Tigger1 DNA MER2_type 0 2418 2323 9876 169 25 7 chr2 163590149 163590564 -87097290 - L1PA15 LINE L1 -6 6159 5753 1472 108 212 0 chr2 163590564 163590805 -87097049 + AluSx SINE Alu 1 292 -20 9876 169 25 7 chr2 163590805 163593120 -87094734 - L1PA15 LINE L1 -412 5753 3421 14095 119 28 27 chr2 163593120 163593953 -87093901 - Tigger1 DNA MER2_type -95 2323 1493 1707 167 3 27 chr2 163593953 163594253 -87093601 - AluJo SINE Alu -19 293 1 14095 119 28 27 chr2 163594253 163594940 -87092914 - Tigger1 DNA MER2_type -925 1493 808 2047 94 48 92 chr2 163594940 163595332 -87092522 + THE1C LTR MaLR 1 375 0 14095 119 28 27 chr2 163595332 163595934 -87091920 - Tigger1 DNA MER2_type -1610 808 191 1792 197 0 16 chr2 163595934 163596249 -87091605 + AluJo SINE Alu 1 310 -2 14095 119 28 27 chr2 163596249 163596441 -87091413 - Tigger1 DNA MER2_type -2227 191 1 1256 205 50 63 chr2 163597859 163598240 -87089614 - MLT1B LTR MaLR 0 390 15 2717 155 20 6 chr2 163598463 163598973 -87088881 - L1MC2 LINE L1 -14 6330 5814 1490 127 16 0 chr2 163598974 163599218 -87088636 - MER44D DNA MER2_type 0 605 303 2210 98 53 36 chr2 163600232 163600589 -87087265 - THE1B LTR MaLR 0 364 2 11706 97 8 3 chr2 163600590 163602163 -87085691 - THE1B-int LTR MaLR 0 1580 1 2197 116 51 23 chr2 163602163 163602517 -87085337 - THE1B LTR MaLR 0 364 1 195 324 13 7 chr2 163602623 163602729 -87085125 + L2 LINE L2 695 799 -2515 260 326 0 0 chr2 163603120 163603209 -87084645 - L1MEc LINE L1 -4753 1643 1555 8892 221 19 8 chr2 163603693 163606674 -87081180 - L1PA16 LINE L1 -15 6151 3102 319 361 105 11 chr2 163606696 163606973 -87080881 + L2 LINE L2 1130 1432 -1882 2722 148 30 2 chr2 163607636 163608103 -87079751 - L1PA16 LINE L1 -4 6162 5683 437 223 176 34 chr2 163609093 163609241 -87078613 + MER5B DNA MER1_type 1 169 -9 5777 122 18 3 chr2 163609309 163610200 -87077654 + L1PA16 LINE L1 5254 6157 -9 24 85 0 0 chr2 163610249 163610308 -87077546 + AT_rich Low_complexity Low_complexity 1 59 0 357 269 75 0 chr2 163610313 163610406 -87077448 + MER5A DNA MER1_type 10 109 -80 1720 131 47 68 chr2 163610432 163610813 -87077041 + THE1C LTR MaLR 1 373 -2 572 209 19 51 chr2 163610863 163611021 -87076833 - MER5B DNA MER1_type 0 178 26 7368 27 10 2 chr2 163611751 163613331 -87074523 - L1PA4 LINE L1 -2 6153 4566 4672 164 5 21 chr2 163613333 163613670 -87074184 - L1P LINE L1 -3603 2543 2202 2130 110 7 0 chr2 163613670 163613961 -87073893 - AluSx SINE Alu -7 305 13 4672 164 5 21 chr2 163613961 163614487 -87073367 - L1P LINE L1 -3944 2202 1694 1914 35 0 0 chr2 163614642 163614873 -87072981 + L1PA4 LINE L1 5922 6152 -3 38 68 0 0 chr2 163616619 163616692 -87071162 + AT_rich Low_complexity Low_complexity 1 73 0 265 307 63 8 chr2 163617243 163617370 -87070484 + L2 LINE L2 3144 3277 -36 202 128 0 26 chr2 163617499 163617538 -87070316 + L2 LINE L2 3275 3312 -1 21 0 0 0 chr2 163619034 163619055 -87068799 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 163620284 163620305 -87067549 + AT_rich Low_complexity Low_complexity 1 21 0 1275 242 27 70 chr2 163620363 163620491 -87067363 + MLT1C LTR MaLR 1 133 -334 1657 205 186 131 chr2 163620491 163621456 -87066398 + LTR28 LTR ERV1 2 1020 0 1275 242 27 70 chr2 163621456 163621815 -87066039 + MLT1C LTR MaLR 133 467 0 1250 277 131 32 chr2 163621866 163622465 -87065389 + L2 LINE L2 2386 3054 -259 1783 213 140 4 chr2 163622532 163622982 -87064872 - L1ME1 LINE L1 -6 6160 5650 188 130 0 58 chr2 163622982 163623051 -87064803 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 358 239 0 0 chr2 163623053 163623120 -87064734 - L1ME1 LINE L1 -520 5646 5580 639 136 0 34 chr2 163623120 163623238 -87064616 + AluJb SINE Alu 199 312 0 268 267 47 47 chr2 163623245 163623331 -87064523 - L1ME1 LINE L1 -588 5578 5493 618 223 19 32 chr2 163623360 163623517 -87064337 + L2 LINE L2 3159 3313 0 1978 165 0 0 chr2 163623777 163624086 -87063768 - AluSx SINE Alu -3 309 1 21 36 0 0 chr2 163624134 163624162 -87063692 + AT_rich Low_complexity Low_complexity 1 28 0 3715 187 139 12 chr2 163624345 163625256 -87062598 + MER52A LTR ERV1 1 1027 -728 21 0 0 0 chr2 163625998 163626019 -87061835 + AT_rich Low_complexity Low_complexity 1 21 0 25 75 0 0 chr2 163626139 163626192 -87061662 + AT_rich Low_complexity Low_complexity 1 53 0 21 71 0 0 chr2 163626768 163626810 -87061044 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 163629095 163629123 -87058731 + AT_rich Low_complexity Low_complexity 1 28 0 39 22 0 0 chr2 163629443 163629489 -87058365 + AT_rich Low_complexity Low_complexity 1 46 0 2285 101 0 0 chr2 163632024 163632331 -87055523 - AluSx SINE Alu -5 307 1 1188 144 0 0 chr2 163632700 163632874 -87054980 + AluSg/x SINE Alu 135 308 -4 537 302 107 25 chr2 163634021 163634263 -87053591 + MIR SINE MIR 1 262 0 299 337 103 0 chr2 163635075 163635216 -87052638 - MIR3 SINE MIR -10 198 42 22 0 0 0 chr2 163635679 163635701 -87052153 + AT_rich Low_complexity Low_complexity 1 22 0 1702 146 7 24 chr2 163635718 163636006 -87051848 + AluJb SINE Alu 5 287 -25 23 86 0 0 chr2 163636098 163636156 -87051698 + AT_rich Low_complexity Low_complexity 1 58 0 21 57 0 0 chr2 163637136 163637171 -87050683 + AT_rich Low_complexity Low_complexity 1 35 0 186 296 0 0 chr2 163638333 163638387 -87049467 - L2 LINE L2 -4 3309 3256 180 0 0 0 chr2 163638864 163638884 -87048970 + (T)n Simple_repeat Simple_repeat 1 20 0 201 176 0 0 chr2 163639305 163639339 -87048515 + A-rich Low_complexity Low_complexity 1 34 0 1205 217 64 108 chr2 163642845 163643328 -87044526 - MLT1C LTR MaLR 0 467 6 2081 155 0 0 chr2 163644213 163644548 -87043306 + AluSx SINE Alu 1 312 0 729 136 24 131 chr2 163644997 163645141 -87042713 - Charlie1 DNA MER1_type -28 2733 2616 1451 180 28 14 chr2 163645141 163645424 -87042430 + AluJb SINE Alu 4 290 -22 729 136 24 131 chr2 163645424 163645485 -87042369 - Charlie1 DNA MER1_type -145 2616 2550 220 361 34 8 chr2 163645872 163645991 -87041863 + L2 LINE L2 1783 1904 -1410 28987 97 10 9 chr2 163646235 163651349 -87036505 - L1PA7 LINE L1 -2 6152 1042 24 0 0 0 chr2 163651840 163651864 -87035990 + AT_rich Low_complexity Low_complexity 1 24 0 700 299 102 27 chr2 163652427 163652798 -87035056 - MLT1I LTR MaLR -10 399 1 433 224 81 48 chr2 163652896 163652971 -87034883 - MER2 DNA MER2_type -1 344 273 1662 163 20 30 chr2 163652971 163653271 -87034583 + AluJo SINE Alu 5 301 -11 433 224 81 48 chr2 163653271 163653403 -87034451 - MER2 DNA MER2_type -72 273 130 314 141 183 28 chr2 163653403 163653474 -87034380 - Tigger5 DNA MER2_type 0 2323 2242 * 456 157 0 0 chr2 163653471 163653541 -87034313 + Tigger5 DNA MER2_type 2249 2318 -5 416 215 0 0 chr2 163653541 163653620 -87034234 - Tigger5 DNA MER2_type -2243 80 2 811 202 0 0 chr2 163653622 163653751 -87034103 - MER2 DNA MER2_type -215 130 2 23 0 0 0 chr2 163654063 163654086 -87033768 + AT_rich Low_complexity Low_complexity 1 23 0 27 49 0 0 chr2 163654175 163654216 -87033638 + AT_rich Low_complexity Low_complexity 1 41 0 207 0 0 0 chr2 163654448 163654471 -87033383 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 7456 36 0 1 chr2 163654471 163656100 -87031754 - L1PA3 LINE L1 -6 6149 4521 1054 8 0 0 chr2 163656100 163656224 -87031630 + L1PA3 LINE L1 4402 4525 -1621 251 288 45 4 chr2 163657613 163657701 -87030153 + MIR SINE MIR 19 116 -92 772 222 130 0 chr2 163657714 163657899 -87029955 + MER3 DNA MER1_type 1 209 0 244 218 0 36 chr2 163657856 163657911 -87029943 - MER3 DNA MER1_type -119 90 38 * 3454 238 91 15 chr2 163658220 163659162 -87028692 + L2 LINE L2 1033 2046 -1268 275 306 59 12 chr2 163660119 163660204 -87027650 + L2 LINE L2 3184 3272 0 523 298 7 0 chr2 163660212 163660353 -87027501 - MIR SINE MIR -65 197 56 26 50 0 0 chr2 163664620 163664660 -87023194 + AT_rich Low_complexity Low_complexity 1 40 0 2074 126 60 0 chr2 163664727 163665045 -87022809 - MER1B DNA MER1_type 0 337 1 235 366 21 0 chr2 163665558 163665651 -87022203 - L3 LINE CR1 -5 1572 1478 2311 22 0 7 chr2 163666362 163666636 -87021218 + AluY SINE Alu 39 310 -1 537 296 102 73 chr2 163666995 163667309 -87020545 - L2 LINE L2 -32 3240 2918 23 0 0 0 chr2 163667682 163667705 -87020149 + AT_rich Low_complexity Low_complexity 1 23 0 2402 28 0 0 chr2 163667864 163668148 -87019706 + L1PA4 LINE L1 5869 6152 -3 2331 152 36 10 chr2 163668825 163669240 -87018614 + MER52A LTR ERV1 1330 1755 0 205 328 0 0 chr2 163669897 163669961 -87017893 + L2 LINE L2 3250 3313 0 518 333 57 10 chr2 163670559 163670751 -87017103 - MIR SINE MIR -36 226 26 258 285 152 30 chr2 163670918 163671083 -87016771 - L2 LINE L2 -30 3283 3099 695 249 24 103 chr2 163672398 163672469 -87015385 - MIR SINE MIR -26 236 161 2595 32 0 9 chr2 163672469 163672785 -87015069 + L1PA4 LINE L1 5841 6153 -2 695 249 24 103 chr2 163672785 163672966 -87014888 - MIR SINE MIR -101 161 4 192 152 0 0 chr2 163673094 163673127 -87014727 + T-rich Low_complexity Low_complexity 2 34 0 36 94 0 0 chr2 163673434 163673540 -87014314 + AT_rich Low_complexity Low_complexity 1 106 0 17925 43 2 6 chr2 163674114 163676391 -87011463 - L1P LINE L1 -2612 3534 1267 7697 21 0 6 chr2 163676391 163677489 -87010365 + L1PA3 LINE L1 5063 6155 0 28 48 0 0 chr2 163677490 163677532 -87010322 + AT_rich Low_complexity Low_complexity 1 42 0 220 353 164 25 chr2 163677610 163677732 -87010122 + MIR3 SINE MIR 19 157 -51 42 20 0 0 chr2 163679478 163679527 -87008327 + AT_rich Low_complexity Low_complexity 1 49 0 224 246 49 0 chr2 163679543 163679604 -87008250 - MIR SINE MIR -150 112 49 1437 119 10 0 chr2 163679853 163680099 -87007755 - AluSg/x SINE Alu 0 328 81 22 0 0 0 chr2 163680454 163680476 -87007378 + AT_rich Low_complexity Low_complexity 1 22 0 1332 155 4 17 chr2 163681824 163682063 -87005791 - L1MA8 LINE L1 -290 6001 5766 1025 102 17 6 chr2 163682080 163682256 -87005598 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 283 207 0 23 chr2 163682256 163682343 -87005511 + CT-rich Low_complexity Low_complexity 1 85 0 1481 194 20 7 chr2 163682350 163682643 -87005211 - AluJo SINE Alu -15 297 1 10484 165 75 36 chr2 163682647 163682966 -87004888 - L1MA8 LINE L1 -508 5783 5478 3754 126 7 7 chr2 163682966 163683563 -87004291 - L1MA3 LINE L1 0 6305 5709 10484 165 75 36 chr2 163683563 163684686 -87003168 - L1MA8 LINE L1 -813 5478 4400 180 0 0 0 chr2 163684686 163684706 -87003148 + (TTTC)n Simple_repeat Simple_repeat 1 20 0 10484 165 75 36 chr2 163684706 163686168 -87001686 - L1MA8 LINE L1 -1891 4400 2768 233 182 0 73 chr2 163686844 163686898 -87000956 + MLT1A2 LTR MaLR 1 50 -324 700 151 104 137 chr2 163686898 163686939 -87000915 - LTR64 LTR ERVK 0 558 517 1807 161 7 0 chr2 163686939 163687231 -87000623 + AluSx SINE Alu 1 294 -18 700 151 104 137 chr2 163687231 163687401 -87000453 - LTR64 LTR ERVK -41 517 354 25 75 0 0 chr2 163687422 163687475 -87000379 + AT_rich Low_complexity Low_complexity 1 53 0 257 289 34 27 chr2 163687870 163688019 -86999835 - HAL1 LINE L1 -112 2395 2246 1974 127 3 3 chr2 163688021 163688320 -86999534 - AluSc SINE Alu -7 302 4 22 103 0 0 chr2 163688668 163688746 -86999108 + AT_rich Low_complexity Low_complexity 1 78 0 259 275 0 0 chr2 163688794 163688863 -86998991 - HAL1 LINE L1 -359 2148 2080 3935 229 121 11 chr2 163688918 163689770 -86998084 + L1M4b LINE L1 11 985 -5874 805 152 0 36 chr2 163689770 163689908 -86997946 + FLAM_C SINE Alu 1 133 0 3935 229 121 11 chr2 163689908 163690029 -86997825 + L1M4b LINE L1 985 1091 -5768 2251 234 75 38 chr2 163690217 163690819 -86997035 - MER72 LTR ERV1 -37 685 62 339 78 0 0 chr2 163694094 163694145 -86993709 + (TA)n Simple_repeat Simple_repeat 1 51 0 228 200 0 0 chr2 163694743 163694798 -86993056 + (TG)n Simple_repeat Simple_repeat 2 56 0 511 335 10 20 chr2 163696195 163696392 -86991462 + MIR SINE MIR 52 246 -16 38 39 0 0 chr2 163698578 163698630 -86989224 + AT_rich Low_complexity Low_complexity 1 52 0 1167 147 20 5 chr2 163698819 163699017 -86988837 - Tigger4(Zombi) DNA MER2_type 0 2731 2531 686 136 18 0 chr2 163699020 163699130 -86988724 - Tigger4(Zombi) DNA MER2_type -2607 124 13 722 237 121 20 chr2 163699493 163699691 -86988163 + MIR SINE MIR 3 220 -42 331 203 0 0 chr2 163700928 163700987 -86986867 + MADE1 DNA Mariner 1 59 -21 2124 128 0 0 chr2 163751880 163752168 -86935686 + AluSx SINE Alu 3 290 -22 242 308 71 55 chr2 163752203 163752385 -86935469 + L2 LINE L2 3123 3307 -6 591 281 52 26 chr2 163752889 163753081 -86934773 - MIR3 SINE MIR -7 201 5 24 77 0 0 chr2 163756568 163756620 -86931234 + AT_rich Low_complexity Low_complexity 1 52 0 693 257 42 46 chr2 163758449 163758690 -86929164 + MER41D LTR ERV1 318 557 0 459 0 0 0 chr2 163759208 163759259 -86928595 + (TA)n Simple_repeat Simple_repeat 2 52 0 232 264 69 0 chr2 163759272 163759344 -86928510 - MIR SINE MIR -85 177 101 185 128 0 26 chr2 163759352 163759391 -86928463 + (TA)n Simple_repeat Simple_repeat 1 38 0 335 225 56 100 chr2 163760021 163760181 -86927673 - MIR SINE MIR -77 185 33 1840 124 14 14 chr2 163760753 163761063 -86926791 - AluSx SINE Alu 0 310 1 2001 122 61 0 chr2 163762734 163763013 -86924841 + AluSx SINE Alu 1 296 -16 2410 97 0 0 chr2 163763020 163763330 -86924524 - AluY SINE Alu -1 310 1 1643 129 109 22 chr2 163768117 163768428 -86919426 + MER44D DNA MER2_type 2 609 0 263 290 75 11 chr2 163768887 163768980 -86918874 + L2 LINE L2 3169 3267 -46 436 261 48 100 chr2 163769167 163769397 -86918457 - MIR SINE MIR -1 261 44 668 286 110 13 chr2 163771343 163771570 -86916284 - MIR SINE MIR -12 250 2 425 262 85 7 chr2 163772655 163772796 -86915058 + MIR SINE MIR 99 250 -12 323 328 86 0 chr2 163773566 163773682 -86914172 - MER91A DNA MER1_type 0 196 71 326 156 16 0 chr2 163774150 163774214 -86913640 + GA-rich Low_complexity Low_complexity 1 65 0 24 0 0 0 chr2 163775041 163775065 -86912789 + AT_rich Low_complexity Low_complexity 1 24 0 273 57 0 0 chr2 163776097 163776132 -86911722 + (CA)n Simple_repeat Simple_repeat 1 35 0 21 57 0 0 chr2 163778184 163778219 -86909635 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr2 163778897 163778929 -86908925 + AT_rich Low_complexity Low_complexity 1 32 0 216 216 0 0 chr2 163780491 163780542 -86907312 + CT-rich Low_complexity Low_complexity 3 53 0 357 24 0 0 chr2 163781025 163781067 -86906787 + (TG)n Simple_repeat Simple_repeat 1 42 0 246 267 10 40 chr2 163781677 163781778 -86906076 - L1ME3A LINE L1 -5 6165 6068 461 185 99 26 chr2 163781882 163782033 -86905821 - L1ME3A LINE L1 -223 5947 5786 203 292 239 18 chr2 163782506 163782619 -86905235 + MIR SINE MIR 36 173 -89 22 35 0 0 chr2 163784638 163784667 -86903187 + AT_rich Low_complexity Low_complexity 1 29 0 260 337 40 0 chr2 163785074 163785175 -86902679 + MIR SINE MIR 110 214 -48 349 287 180 13 chr2 163787385 163787535 -86900319 + MER5A DNA MER1_type 15 189 0 186 259 103 0 chr2 163788924 163788982 -86898872 + MIR SINE MIR 81 144 -64 596 281 108 0 chr2 163789358 163789543 -86898311 + MIR SINE MIR 45 249 -13 364 266 70 14 chr2 163789719 163789862 -86897992 + MIR SINE MIR 7 157 -105 21 57 0 0 chr2 163790798 163790833 -86897021 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 163791815 163791844 -86896010 + AT_rich Low_complexity Low_complexity 1 29 0 203 240 40 27 chr2 163792357 163792432 -86895422 + MIR SINE MIR 132 207 -55 253 274 86 91 chr2 163794529 163794726 -86893128 + L2 LINE L2 2326 2521 -793 255 312 80 40 chr2 163795395 163795520 -86892334 + L2 LINE L2 3143 3272 0 180 263 63 63 chr2 163796176 163796271 -86891583 - MIR3 SINE MIR -109 99 5 208 225 0 0 chr2 163796453 163796493 -86891361 + GA-rich Low_complexity Low_complexity 1 40 0 273 250 0 0 chr2 163797474 163797538 -86890316 + L2 LINE L2 3202 3265 -7 1189 226 61 18 chr2 163798384 163798633 -86889221 - MER58B DNA MER1_type -2079 341 73 1822 117 8 0 chr2 163798633 163798882 -86888972 + AluSx SINE Alu 54 304 -8 1189 226 61 18 chr2 163798882 163798959 -86888895 - MER58B DNA MER1_type -2347 73 1 1984 158 0 0 chr2 163799592 163799889 -86887965 + AluSx SINE Alu 2 298 -14 717 277 91 9 chr2 163800222 163800453 -86887401 - MIR SINE MIR 0 262 13 264 267 0 17 chr2 163800674 163800734 -86887120 + L2 LINE L2 3214 3272 0 255 61 0 0 chr2 163801451 163801484 -86886370 + (TCCA)n Simple_repeat Simple_repeat 2 34 0 298 296 0 0 chr2 163801495 163801566 -86886288 - L2 LINE L2 0 3272 3202 493 202 0 0 chr2 163802649 163802743 -86885111 + MIR SINE MIR 45 138 -70 209 250 0 0 chr2 163803859 163803903 -86883951 + MIR SINE MIR 219 262 0 243 128 0 0 chr2 163803907 163803917 -86883937 + (CAA)n Simple_repeat Simple_repeat 2 11 -37 2190 80 31 7 chr2 163803917 163804205 -86883649 + AluSg SINE Alu 1 295 -15 243 128 0 0 chr2 163804205 163804241 -86883613 + (CAA)n Simple_repeat Simple_repeat 10 48 0 905 284 113 27 chr2 163804483 163804927 -86882927 + L2 LINE L2 2832 3313 0 317 80 0 20 chr2 163805367 163805417 -86882437 + (TA)n Simple_repeat Simple_repeat 2 50 0 479 301 174 9 chr2 163807885 163808104 -86879750 - MIR SINE MIR -6 256 2 207 296 42 42 chr2 163808109 163808180 -86879674 - L3 LINE CR1 -106 1471 1401 267 260 250 0 chr2 163808277 163808377 -86879477 - MIR SINE MIR -63 145 21 220 323 11 43 chr2 163808394 163808487 -86879367 - L3 LINE CR1 -203 1374 1285 195 300 113 25 chr2 163810834 163810914 -86876940 - L3 LINE CR1 -11 1566 1480 302 282 43 28 chr2 163811023 163811190 -86876664 + L1MC2 LINE L1 5443 5604 -517 1042 256 88 5 chr2 163811280 163811701 -86876153 + L1M4 LINE L1 3083 3538 -2608 3834 138 31 64 chr2 163811701 163812438 -86875416 + L1MC2 LINE L1 5623 6335 -9 238 405 91 0 chr2 163812767 163812888 -86874966 + L2 LINE L2 3122 3253 -19 237 337 92 0 chr2 163812909 163813007 -86874847 - MIR SINE MIR -63 145 39 301 311 228 0 chr2 163813622 163813802 -86874052 + MIR SINE MIR 18 238 -24 207 256 0 0 chr2 163813895 163813934 -86873920 + (CTCA)n Simple_repeat Simple_repeat 3 41 0 297 311 174 29 chr2 163814217 163814603 -86873251 - L2 LINE L2 0 3313 2872 343 293 9 19 chr2 163814637 163814743 -86873111 - MER5B DNA MER1_type -73 105 1 457 301 38 30 chr2 163814755 163814991 -86872863 - L2 LINE L2 -448 2866 2629 452 226 19 101 chr2 163815194 163815260 -86872594 - MER5B DNA MER1_type 0 178 108 1815 177 3 3 chr2 163815260 163815554 -86872300 + AluJo SINE Alu 4 297 -15 452 226 19 101 chr2 163815554 163815646 -86872208 - MER5B DNA MER1_type -70 108 33 189 227 0 0 chr2 163815909 163816019 -86871835 + (TG)n Simple_repeat Simple_repeat 2 111 0 941 182 6 28 chr2 163816458 163816639 -86871215 - FRAM SINE Alu 0 176 1 182 372 39 28 chr2 163817353 163817533 -86870321 - L2 LINE L2 -282 2990 2809 476 276 159 72 chr2 163817846 163818349 -86869505 - L2 LINE L2 -833 2481 1935 986 196 100 7 chr2 163819275 163819573 -86868281 - MER33 DNA MER1_type 0 363 5 3024 104 0 10 chr2 163820770 163821175 -86866679 + L1PA11 LINE L1 5774 6174 0 32 26 0 0 chr2 163822565 163822604 -86865250 + AT_rich Low_complexity Low_complexity 1 39 0 342 215 13 0 chr2 163822630 163822709 -86865145 - MER116 DNA Mariner 0 80 1 237 271 71 0 chr2 163823353 163823423 -86864431 + MIR SINE MIR 36 110 -152 1075 196 71 82 chr2 163823424 163823549 -86864305 + MLT1A1 LTR MaLR 1 126 -239 2228 115 7 0 chr2 163823549 163823854 -86864000 + AluSp SINE Alu 1 307 -6 1075 196 71 82 chr2 163823854 163824095 -86863759 + MLT1A1 LTR MaLR 126 363 -2 7049 196 76 48 chr2 163824097 163824846 -86863008 + MLT1A1-int LTR MaLR 1 727 -1008 1459 104 90 0 chr2 163824846 163825057 -86862797 + MER30 DNA MER1_type 1 230 0 7049 196 76 48 chr2 163825057 163825990 -86861864 + MLT1A1-int LTR MaLR 727 1731 -4 1331 166 142 59 chr2 163825993 163826330 -86861524 + MLT1A1 LTR MaLR 1 365 0 210 313 111 0 chr2 163826353 163826452 -86861402 + MIR SINE MIR 131 240 -22 1674 120 109 14 chr2 163826926 163827201 -86860653 + AluSq SINE Alu 1 301 -12 1320 239 79 44 chr2 163827390 163827872 -86859982 + L2 LINE L2 2810 3308 -5 2582 171 66 122 chr2 163828006 163828776 -86859078 + LTR8A LTR ERV1 1 727 0 326 291 108 54 chr2 163828831 163829034 -86858820 + LTR50 LTR ERVL 1 214 -581 290 200 191 0 chr2 163829184 163829289 -86858565 + LTR33A LTR ERVL 364 488 -35 2177 129 0 0 chr2 163829290 163829584 -86858270 - AluSx SINE Alu -18 294 1 2601 166 74 0 chr2 163829678 163830111 -86857743 + LTR24 LTR ERV1 3 467 0 795 217 5 48 chr2 163830158 163830347 -86857507 - MER58A DNA MER1_type -2 222 42 475 286 122 34 chr2 163831391 163831629 -86856225 - MIR SINE MIR 0 262 4 908 146 6 0 chr2 163832371 163832549 -86855305 + CT-rich Low_complexity Low_complexity 1 179 0 982 168 0 24 chr2 163832551 163832718 -86855136 - FRAM SINE Alu -14 162 1 23 0 0 0 chr2 163833143 163833166 -86854688 + AT_rich Low_complexity Low_complexity 1 23 0 716 289 16 11 chr2 163833231 163833421 -86854433 - L2 LINE L2 -1 3312 3122 3459 270 98 33 chr2 163833429 163833500 -86854354 - L2 LINE L2 -556 2758 2693 1973 142 0 41 chr2 163833500 163833816 -86854038 + AluSx SINE Alu 3 305 -7 3459 270 98 33 chr2 163833816 163833839 -86854015 - L2 LINE L2 -621 2693 2673 2255 202 86 72 chr2 163833839 163834454 -86853400 - MLT1E2 LTR MaLR -2 624 1 3459 270 98 33 chr2 163834454 163835784 -86852070 - L2 LINE L2 -641 2673 1240 1353 263 48 54 chr2 163836577 163837098 -86850756 + MLT1L LTR MaLR 90 607 -8 289 330 76 0 chr2 163837351 163837469 -86850385 + L2 LINE L2 3173 3299 -14 496 303 130 34 chr2 163837680 163838127 -86849727 + L2 LINE L2 2454 2857 -456 2137 142 117 28 chr2 163838127 163838522 -86849332 - MSTB1 LTR MaLR -2 430 1 496 303 130 34 chr2 163838522 163838588 -86849266 + L2 LINE L2 2857 3305 -8 296 290 161 23 chr2 163839844 163839955 -86847899 + MIR SINE MIR 1 116 -92 1096 199 0 35 chr2 163839966 163840192 -86847662 + MLT1F1 LTR MaLR 7 224 -318 1463 153 142 0 chr2 163840391 163840652 -86847202 + MLT1F1 LTR MaLR 266 563 -4 413 248 62 23 chr2 163840677 163840806 -86847048 + MIR SINE MIR 129 262 0 224 82 66 33 chr2 163842039 163842100 -86845754 + CT-rich Low_complexity Low_complexity 2 64 0 182 188 0 0 chr2 163842413 163842445 -86845409 + L2 LINE L2 2300 2331 -983 1519 121 5 5 chr2 163842874 163843089 -86844765 + AluSc SINE Alu 2 216 -93 248 234 91 110 chr2 163843578 163843732 -86844122 + L2 LINE L2 3161 3311 -2 34 42 0 0 chr2 163844593 163844641 -86843213 + AT_rich Low_complexity Low_complexity 1 48 0 285 287 40 27 chr2 163845899 163846049 -86841805 - MIR3 SINE MIR -25 183 32 281 273 56 20 chr2 163846275 163846407 -86841447 - MIR SINE MIR -67 141 20 267 315 74 0 chr2 163846531 163846639 -86841215 - L2 LINE L2 -1 3312 3197 1541 286 63 37 chr2 163847056 163847913 -86839941 - ERVL LTR ERVL -1452 4312 3396 567 211 18 0 chr2 163847914 163848023 -86839831 + MLT1C LTR MaLR 1 111 -356 828 158 7 7 chr2 163849225 163849377 -86838477 + MLT1C LTR MaLR 100 251 -139 2941 96 3 0 chr2 163849388 163849751 -86838103 - THE1B LTR MaLR 0 364 1 9514 105 92 28 chr2 163849751 163851237 -86836617 - THE1B-int LTR MaLR 0 1580 1 2950 99 0 3 chr2 163851237 163851602 -86836252 - THE1B LTR MaLR 0 364 1 882 173 7 0 chr2 163851620 163851759 -86836095 + MLT1C LTR MaLR 325 464 -3 285 120 0 40 chr2 163851874 163851924 -86835930 + MLT1F1 LTR MaLR 518 565 -2 1711 323 64 9 chr2 163851969 163852641 -86835213 - ERVL LTR ERVL -2495 3269 2561 801 250 39 42 chr2 163852670 163852930 -86834924 - ERVL LTR ERVL -3290 2474 2216 1328 184 5 0 chr2 163852933 163853151 -86834703 + MLT1D LTR MaLR 281 499 -6 735 269 32 56 chr2 163853650 163853899 -86833955 - LTR33 LTR ERVL -255 266 24 284 281 45 0 chr2 163854001 163854090 -86833764 + L2 LINE L2 3179 3271 -1 505 246 79 97 chr2 163855494 163855792 -86832062 - MER34 LTR ERV1 -45 497 230 345 282 0 0 chr2 163855973 163856058 -86831796 - MER34 LTR ERV1 -457 85 1 189 74 0 0 chr2 163857736 163857763 -86830091 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 295 219 0 62 chr2 163857819 163857915 -86829939 - MER57-int LTR ERV1 -1387 6150 6061 306 123 88 0 chr2 163859614 163859671 -86828183 - L1MB2 LINE L1 -7 6164 6103 189 107 0 0 chr2 163860169 163860197 -86827657 + (T)n Simple_repeat Simple_repeat 1 28 0 498 180 104 55 chr2 163860234 163860323 -86827531 - MER106A DNA MER1_type -44 192 109 180 0 0 0 chr2 163860323 163860343 -86827511 + (TA)n Simple_repeat Simple_repeat 2 21 0 498 180 104 55 chr2 163860343 163860436 -86827418 - MER106A DNA MER1_type -127 109 1 2217 133 3 0 chr2 163860574 163860876 -86826978 - AluSx SINE Alu -9 303 1 445 191 0 0 chr2 163860897 163860986 -86826868 + MER89 LTR ERV1 1 89 -470 1219 211 47 0 chr2 163861002 163861281 -86826573 + MER89 LTR ERV1 268 559 0 725 291 34 9 chr2 163862295 163862618 -86825236 + L1MA9 LINE L1 5951 6281 -31 316 296 80 92 chr2 163863133 163863447 -86824407 + L2 LINE L2 2178 2487 -827 197 274 97 0 chr2 163863597 163863659 -86824195 + L2 LINE L2 2720 2787 -527 298 368 58 23 chr2 163863777 163863948 -86823906 + L2 LINE L2 2915 3091 -181 804 282 77 0 chr2 163864015 163864249 -86823605 - MIR SINE MIR 0 262 11 366 307 0 10 chr2 163864263 163864364 -86823490 + L2 LINE L2 3214 3313 0 226 327 69 55 chr2 163864793 163864995 -86822859 + L3b LINE CR1 1111 1315 -268 225 0 0 0 chr2 163866591 163866616 -86821238 + (TA)n Simple_repeat Simple_repeat 2 26 0 4091 52 0 15 chr2 163866616 163867132 -86820722 - L1PA5 LINE L1 -10 6144 5637 335 213 0 0 chr2 163867353 163867428 -86820426 + MER116 DNA Mariner 6 80 0 1441 202 36 14 chr2 163867790 163868147 -86819707 - MLT1A1 LTR MaLR 0 365 1 2207 132 0 0 chr2 163868817 163869120 -86818734 + AluSx SINE Alu 1 303 -9 349 266 0 0 chr2 163869772 163869851 -86818003 + L2 LINE L2 3235 3313 0 329 301 144 6 chr2 163869999 163870172 -86817682 + MIR SINE MIR 60 256 -6 27 73 0 0 chr2 163870279 163870334 -86817520 + AT_rich Low_complexity Low_complexity 1 55 0 2086 132 0 0 chr2 163870463 163870743 -86817111 + AluSx SINE Alu 3 282 -30 252 243 14 14 chr2 163872374 163872448 -86815406 + LTR33 LTR ERVL 32 105 -416 344 67 0 0 chr2 163872449 163872494 -86815360 - MLT2B1 LTR ERVL 0 464 420 2627 122 34 11 chr2 163872494 163872930 -86814924 - Tigger2 DNA MER2_type 0 2718 2273 300 111 0 0 chr2 163872971 163873016 -86814838 + (TG)n Simple_repeat Simple_repeat 2 46 0 1545 192 35 35 chr2 163873041 163873385 -86814469 - MLT2B1 LTR ERVL -175 345 2 356 286 34 25 chr2 163873385 163873498 -86814356 + LTR33 LTR ERVL 99 212 -309 193 319 56 35 chr2 163873607 163873751 -86814103 - L2 LINE L2 -193 3079 2933 786 197 88 35 chr2 163874324 163874779 -86813075 - MLT1G LTR MaLR -14 516 11 436 331 6 12 chr2 163875598 163875767 -86812087 + LTR16C LTR ERVL 306 473 -18 1640 236 61 30 chr2 163876065 163876369 -86811485 + MLT1F LTR MaLR 1 327 -215 2068 158 120 57 chr2 163876369 163876844 -86811010 - MLT1D LTR MaLR 0 505 1 1640 236 61 30 chr2 163876844 163877014 -86810840 + MLT1F LTR MaLR 327 490 -52 280 182 0 0 chr2 163877052 163877109 -86810745 + MLT1F1 LTR MaLR 509 559 -8 1477 227 7 20 chr2 163877365 163877669 -86810185 + AluJo SINE Alu 1 300 -12 835 163 29 77 chr2 163877676 163877885 -86809969 + L1MB8 LINE L1 5980 6178 0 306 181 24 24 chr2 163877892 163877975 -86809879 + L1ME3A LINE L1 5939 6021 -149 977 128 0 45 chr2 163877987 163878171 -86809683 - AluSg/x SINE Alu 0 311 135 307 250 62 0 chr2 163878187 163878283 -86809571 + L1ME3A LINE L1 6058 6159 -11 21 36 0 0 chr2 163878755 163878783 -86809071 + AT_rich Low_complexity Low_complexity 1 28 0 610 249 17 45 chr2 163878879 163878897 -86808957 + Charlie1 DNA MER1_type 4 21 -2740 1786 232 37 35 chr2 163878897 163879415 -86808439 - LTR40a LTR ERVL 0 519 1 610 249 17 45 chr2 163879415 163879573 -86808281 + Charlie1 DNA MER1_type 21 175 -2586 731 174 14 0 chr2 163879581 163879719 -86808135 + Charlie1 DNA MER1_type 2622 2761 0 526 193 25 34 chr2 163880175 163880294 -86807560 + MER63 DNA MER1_type 9 752 -310 377 167 139 0 chr2 163880296 163880368 -86807486 + MER63 DNA MER1_type 980 1061 0 358 291 36 45 chr2 163881205 163881345 -86806509 - L1ME3A LINE L1 -261 5909 5770 2091 78 53 0 chr2 163881345 163881626 -86806228 - AluSp SINE Alu -17 296 1 358 291 36 45 chr2 163881626 163881708 -86806146 - L1ME3A LINE L1 -400 5770 5689 1625 129 4 0 chr2 163881832 163882065 -86805789 + AluSx SINE Alu 62 295 -17 360 205 172 70 chr2 163882524 163882797 -86805057 - L1ME4a LINE L1 -5 6116 5816 670 195 34 0 chr2 163882826 163882944 -86804910 - FLAM_C SINE Alu -10 123 2 447 258 98 104 chr2 163883184 163883712 -86804142 + MLT1F LTR MaLR 18 542 0 260 307 0 91 chr2 163883716 163883804 -86804050 + L2 LINE L2 3234 3313 0 219 296 178 7 chr2 163885363 163885498 -86802356 + L2 LINE L2 3000 3157 -115 462 75 0 0 chr2 163885552 163885619 -86802235 + (TGAA)n Simple_repeat Simple_repeat 4 70 0 201 171 0 0 chr2 163886105 163886140 -86801714 + A-rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 163886153 163886174 -86801680 + AT_rich Low_complexity Low_complexity 1 21 0 204 83 56 0 chr2 163886201 163886237 -86801617 + T-rich Low_complexity Low_complexity 5 42 0 634 210 249 42 chr2 163887411 163887626 -86800228 - MLT1G3 LTR MaLR 0 530 361 1483 221 20 8 chr2 163887626 163887984 -86799870 + MLT1A1 LTR MaLR 1 362 -3 634 210 249 42 chr2 163887984 163888077 -86799777 - MLT1G3 LTR MaLR -169 361 158 245 315 0 14 chr2 163888078 163888151 -86799703 + MER45 DNA AcHobo 1 72 -881 235 281 0 0 chr2 163888157 163888221 -86799633 + MER45 DNA AcHobo 1516 1579 -2 221 57 29 0 chr2 163888231 163888266 -86799588 + (GA)n Simple_repeat Simple_repeat 2 37 0 695 260 45 14 chr2 163888280 163888503 -86799351 - MLT1G1 LTR MaLR -365 230 1 38 85 0 0 chr2 163888888 163888982 -86798872 + AT_rich Low_complexity Low_complexity 1 94 0 1945 155 0 19 chr2 163888985 163889302 -86798552 - AluSx SINE Alu -1 311 1 472 243 19 0 chr2 163889872 163889979 -86797875 + MER81 DNA DNA 6 114 0 219 36 0 0 chr2 163890927 163890955 -86796899 + (CAGCT)n Simple_repeat Simple_repeat 4 31 0 487 270 50 25 chr2 163891192 163891351 -86796503 + MIR SINE MIR 50 212 -50 3493 269 78 52 chr2 163891754 163893175 -86794679 - L2 LINE L2 -1264 2050 593 2296 55 21 7 chr2 163893270 163893559 -86794295 + AluY SINE Alu 1 293 -18 1583 198 109 31 chr2 163893746 163894225 -86793629 + Charlie1b DNA MER1_type 8 523 0 253 164 16 0 chr2 163894563 163894624 -86793230 - L1ME4a LINE L1 0 6121 6060 21 0 0 0 chr2 163894784 163894805 -86793049 + AT_rich Low_complexity Low_complexity 1 21 0 291 54 0 0 chr2 163894919 163894956 -86792898 + (CA)n Simple_repeat Simple_repeat 1 37 0 403 302 47 52 chr2 163895073 163895305 -86792549 + L1M4 LINE L1 4569 4799 -1347 385 364 58 60 chr2 163896749 163897213 -86790641 + L2 LINE L2 2809 3271 -1 659 342 94 31 chr2 163897684 163898099 -86789755 - L3b LINE CR1 -4 1579 1139 2271 171 60 25 chr2 163898358 163898844 -86789010 + MLT1D LTR MaLR 3 505 0 346 323 159 15 chr2 163899042 163899243 -86788611 - MIR SINE MIR -12 250 21 281 288 88 50 chr2 163900236 163900396 -86787458 + L2 LINE L2 2313 2478 -836 1805 143 4 11 chr2 163900448 163900721 -86787133 + AluJb SINE Alu 27 297 -15 6331 124 29 6 chr2 163900792 163902569 -86785285 - L1MA3 LINE L1 -3 6302 4484 183 100 0 0 chr2 163902638 163902668 -86785186 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2178 115 0 3 chr2 163902765 163903076 -86784778 - AluSq SINE Alu 0 310 1 2005 143 0 28 chr2 163903489 163903810 -86784044 + AluSx SINE Alu 1 312 0 510 212 146 7 chr2 163904093 163904230 -86783624 - MER63A DNA MER1_type -5 205 50 425 230 16 16 chr2 163904398 163904524 -86783330 - L1MC5 LINE L1 -30 7931 7806 326 307 44 7 chr2 163904754 163904891 -86782963 - L1MC5 LINE L1 -426 7535 7394 243 0 0 0 chr2 163905105 163905132 -86782722 + (T)n Simple_repeat Simple_repeat 1 27 0 429 282 32 23 chr2 163905132 163905352 -86782502 - L1MC5 LINE L1 -777 7184 6963 2086 114 0 7 chr2 163905369 163905677 -86782177 + AluSq SINE Alu 3 313 0 512 259 192 20 chr2 163905797 163906198 -86781656 - L1MC4 LINE L1 -1115 6927 6458 801 283 111 16 chr2 163906278 163906646 -86781208 - L1MC4 LINE L1 -1987 5821 5419 21 0 0 0 chr2 163906667 163906688 -86781166 + AT_rich Low_complexity Low_complexity 1 21 0 718 233 25 110 chr2 163906700 163907265 -86780589 - L1ME2 LINE L1 -22 6142 5489 407 289 104 35 chr2 163907300 163908099 -86779755 - L1ME2 LINE L1 -2172 3974 3121 3103 263 74 30 chr2 163908100 163909844 -86778010 - L1M4 LINE L1 -2185 3961 2142 1672 201 8 41 chr2 163909916 163910219 -86777635 - MER82 DNA MER2_type 0 653 362 1812 167 31 0 chr2 163910219 163910507 -86777347 + AluJb SINE Alu 1 297 -15 1672 201 8 41 chr2 163910507 163910567 -86777287 - MER82 DNA MER2_type -291 362 302 183 80 0 0 chr2 163910850 163910875 -86776979 + (T)n Simple_repeat Simple_repeat 1 25 0 234 248 26 88 chr2 163911274 163911387 -86776467 - MER5A DNA MER1_type -80 109 4 27 49 0 0 chr2 163911456 163911497 -86776357 + AT_rich Low_complexity Low_complexity 1 41 0 2288 110 0 0 chr2 163911647 163911947 -86775907 - AluSq SINE Alu -13 300 1 380 287 30 23 chr2 163912120 163912319 -86775535 + MLT1J LTR MaLR 16 282 -310 347 269 106 80 chr2 163912412 163912687 -86775167 + MLT1J LTR MaLR 228 509 -2 285 182 0 0 chr2 163912999 163913054 -86774800 + (CA)n Simple_repeat Simple_repeat 2 56 0 243 270 52 7 chr2 163913575 163913683 -86774171 - MIR SINE MIR -66 142 28 411 289 107 11 chr2 163914080 163914267 -86773587 - Charlie8 DNA MER1_type -2166 251 47 227 217 22 0 chr2 163915299 163915345 -86772509 + L2 LINE L2 3226 3272 0 25 0 0 0 chr2 163916582 163916607 -86771247 + AT_rich Low_complexity Low_complexity 1 25 0 361 235 49 0 chr2 163916715 163916796 -86771058 - MER94 DNA DNA -25 109 25 392 67 17 0 chr2 163918050 163918110 -86769744 + (TC)n Simple_repeat Simple_repeat 2 62 0 873 276 141 25 chr2 163919608 163920241 -86767613 + L1ME4a LINE L1 5415 6120 -1 407 252 54 9 chr2 163924696 163924807 -86763047 + MIR3 SINE MIR 52 167 -41 376 215 370 7 chr2 163925095 163925230 -86762624 + MER5A DNA MER1_type 4 187 -2 217 214 0 0 chr2 163925541 163925583 -86762271 + CT-rich Low_complexity Low_complexity 1 42 0 291 309 121 0 chr2 163926153 163926255 -86761599 + MER45 DNA AcHobo 21 1539 -42 705 302 163 26 chr2 163926311 163926887 -86760967 + L1MC4a LINE L1 5458 6112 -1696 1856 219 99 14 chr2 163926962 163927525 -86760329 + L1ME2 LINE L1 5544 6154 -10 476 219 22 22 chr2 163927570 163927707 -86760147 + L1MC5 LINE L1 7794 7930 -31 244 314 192 27 chr2 163928243 163928504 -86759350 + L3b LINE CR1 1227 1530 -53 180 125 0 0 chr2 163928769 163928801 -86759053 + (TA)n Simple_repeat Simple_repeat 2 33 0 1982 61 0 4 chr2 163929680 163929968 -86757886 - AluY SINE Alu 0 326 40 209 351 143 0 chr2 163930385 163930539 -86757315 - MIR SINE MIR -3 259 84 2944 174 18 4 chr2 163930744 163931301 -86756553 - L1MB7 LINE L1 -58 6126 5562 4137 199 49 8 chr2 163932024 163932511 -86755343 - L1MB5 LINE L1 -8 6166 5626 411 21 0 0 chr2 163932511 163932559 -86755295 + (TA)n Simple_repeat Simple_repeat 1 48 0 4137 199 49 8 chr2 163932559 163932946 -86754908 - L1MB5 LINE L1 -548 5626 5256 46 86 0 0 chr2 163932962 163933078 -86754776 + AT_rich Low_complexity Low_complexity 1 116 0 24 32 0 0 chr2 163933150 163933181 -86754673 + AT_rich Low_complexity Low_complexity 1 31 0 2233 109 0 22 chr2 163933488 163933799 -86754055 - AluSx SINE Alu -8 304 1 430 232 55 118 chr2 163934814 163935086 -86752768 + Charlie8 DNA MER1_type 75 1416 -1001 2060 115 7 0 chr2 163935216 163935561 -86752293 + AluSq SINE Alu 3 349 0 844 321 98 25 chr2 163936827 163937316 -86750538 - L2 LINE L2 -4 3309 2783 627 306 53 5 chr2 163937710 163937919 -86749935 - MIR SINE MIR -32 230 12 242 314 0 47 chr2 163939406 163939492 -86748362 + L2 LINE L2 3232 3313 0 21 0 0 0 chr2 163939517 163939538 -86748316 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr2 163939805 163939829 -86748025 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 417 221 35 12 chr2 163940130 163940216 -86747638 + L2 LINE L2 3185 3272 0 714 189 28 0 chr2 163940454 163940597 -86747257 + MER3 DNA MER1_type 7 153 -56 371 316 0 0 chr2 163942901 163942996 -86744858 + MIR3 SINE MIR 103 197 -11 1362 167 51 10 chr2 163943298 163943591 -86744263 - L1MA4 LINE L1 -12 6288 5984 253 289 53 0 chr2 163943800 163943876 -86743978 - L2 LINE L2 0 3272 3193 342 298 78 52 chr2 163944035 163944226 -86743628 - MIR3 SINE MIR -12 196 1 235 218 0 0 chr2 163947644 163947699 -86740155 + GA-rich Low_complexity Low_complexity 2 56 0 1269 284 64 16 chr2 163948863 163949368 -86738486 + L2 LINE L2 2775 3311 -2 400 298 112 21 chr2 163949368 163949556 -86738298 - MIR SINE MIR -55 207 3 1317 139 48 0 chr2 163949855 163950064 -86737790 - MER20 DNA MER1_type 0 219 1 184 327 117 44 chr2 163950359 163950607 -86737247 + L2 LINE L2 2442 2707 -607 244 280 8 129 chr2 163950941 163951073 -86736781 - L2 LINE L2 -30 3283 3168 321 93 0 0 chr2 163951271 163951325 -86736529 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 2271 109 0 0 chr2 163951325 163951618 -86736236 - AluSg SINE Alu -17 293 1 212 388 80 15 chr2 163951641 163951904 -86735950 - L2 LINE L2 -453 2861 2582 * 681 185 152 0 chr2 163951889 163952040 -86735814 + MER5A DNA MER1_type 16 189 0 501 347 96 20 chr2 163952062 163952405 -86735449 - L2 LINE L2 -725 2589 2221 1889 157 13 20 chr2 163952504 163952810 -86735044 + AluSx SINE Alu 1 304 -8 181 268 54 45 chr2 163952966 163953078 -86734776 + L2 LINE L2 2871 2983 -330 27 73 0 0 chr2 163954564 163954619 -86733235 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr2 163955124 163955145 -86732709 + AT_rich Low_complexity Low_complexity 1 21 0 194 352 45 0 chr2 163955254 163955342 -86732512 - MIR SINE MIR -84 124 33 219 36 0 0 chr2 163961907 163961935 -86725919 + (CA)n Simple_repeat Simple_repeat 2 29 0 911 315 102 39 chr2 163963474 163964299 -86723555 + L2 LINE L2 1537 2413 -901 443 300 0 129 chr2 163964384 163964647 -86723207 + L2 LINE L2 3038 3266 -6 243 348 104 17 chr2 163964692 163964807 -86723047 + MER5A DNA MER1_type 22 146 -43 331 274 77 17 chr2 163965584 163965701 -86722153 + L3 LINE CR1 846 969 -608 252 0 0 0 chr2 163965784 163965812 -86722042 + (CA)n Simple_repeat Simple_repeat 1 28 0 206 296 84 0 chr2 163965865 163965936 -86721918 + L3 LINE CR1 1498 1574 -3 294 326 82 0 chr2 163968726 163968824 -86719030 - L2 LINE L2 -5 3267 3162 357 298 33 20 chr2 163969963 163970114 -86717740 + MIR SINE MIR 12 164 -98 324 250 45 11 chr2 163971469 163971557 -86716297 + MIR SINE MIR 148 238 -24 256 268 0 0 chr2 163971728 163971784 -86716070 + L2 LINE L2 3258 3313 0 273 283 80 44 chr2 163973211 163973324 -86714530 - L2 LINE L2 -2 3311 3195 396 267 43 0 chr2 163973828 163973944 -86713910 + MIR SINE MIR 49 169 -93 1250 225 86 48 chr2 163975856 163976296 -86711558 + MLT1C LTR MaLR 11 467 0 597 303 82 33 chr2 163976363 163976729 -86711125 + MER57A LTR ERV1 14 397 -6 2111 113 17 3 chr2 163977021 163977323 -86710531 - AluSp SINE Alu -7 306 1 21 0 0 0 chr2 163978089 163978110 -86709744 + AT_rich Low_complexity Low_complexity 1 21 0 225 338 14 0 chr2 163978359 163978433 -86709421 + MIR SINE MIR 41 115 -93 275 280 60 48 chr2 163978697 163978865 -86708989 - MARNA DNA Mariner -9 577 408 233 349 15 8 chr2 163978967 163979099 -86708755 + MARNA DNA Mariner 246 378 -208 1900 44 9 4 chr2 163979226 163979453 -86708401 - AluY SINE Alu -16 295 68 2338 85 0 0 chr2 163979487 163979780 -86708074 + AluSc SINE Alu 1 293 -16 237 259 82 24 chr2 163979913 163979998 -86707856 + MARNA DNA Mariner 409 498 -88 22 0 0 0 chr2 163980596 163980618 -86707236 + AT_rich Low_complexity Low_complexity 1 22 0 362 342 152 27 chr2 163981995 163982363 -86705491 - L2 LINE L2 -341 2973 2560 1044 244 34 84 chr2 163982511 163982925 -86704929 + MLT1J1 LTR MaLR 24 416 -30 226 284 9 64 chr2 163982986 163983095 -86704759 - L2 LINE L2 -1219 2095 1993 2370 97 0 0 chr2 163984607 163984947 -86702907 + AluSc SINE Alu 1 340 0 23 0 0 0 chr2 163984989 163985012 -86702842 + AT_rich Low_complexity Low_complexity 1 23 0 516 325 98 5 chr2 163986256 163986450 -86701404 + MIR SINE MIR 51 262 0 23 0 0 0 chr2 163989886 163989909 -86697945 + AT_rich Low_complexity Low_complexity 1 23 0 447 19 0 0 chr2 163990073 163990125 -86697729 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 22 35 0 0 chr2 163990507 163990536 -86697318 + AT_rich Low_complexity Low_complexity 1 29 0 292 341 101 0 chr2 163991571 163991700 -86696154 + MIR3 SINE MIR 19 160 -48 * 555 309 23 17 chr2 163991691 163991866 -86695988 - MIR3 SINE MIR 0 208 33 263 180 0 20 chr2 163991887 163991937 -86695917 + MIR3 SINE MIR 151 199 -9 1787 116 56 3 chr2 163992769 163993053 -86694801 + AluSx SINE Alu 1 299 -13 209 118 0 0 chr2 163993824 163993858 -86693996 + L2 LINE L2 3272 3305 -8 21 0 0 0 chr2 163994003 163994024 -86693830 + AT_rich Low_complexity Low_complexity 1 21 0 375 292 50 87 chr2 163994151 163994473 -86693381 + L2 LINE L2 2664 2973 -341 28 79 0 0 chr2 163994632 163994695 -86693159 + AT_rich Low_complexity Low_complexity 1 63 0 25 51 0 0 chr2 163995654 163995693 -86692161 + AT_rich Low_complexity Low_complexity 1 39 0 587 299 30 53 chr2 163996517 163996781 -86691073 - MIR SINE MIR -4 258 1 232 286 0 48 chr2 163997248 163997311 -86690543 + MER91 DNA MER1_type 130 189 -1 342 335 81 64 chr2 163999303 163999661 -86688193 + L2 LINE L2 2950 3313 0 258 95 0 0 chr2 163999673 163999715 -86688139 + (GCTG)n Simple_repeat Simple_repeat 4 45 0 268 319 67 8 chr2 163999736 163999855 -86687999 + MIR3 SINE MIR 76 201 -7 223 290 14 0 chr2 164000732 164000801 -86687053 + MIR SINE MIR 183 252 -10 361 324 0 9 chr2 164001939 164002044 -86685810 + L2 LINE L2 3205 3308 -5 22 0 0 0 chr2 164002170 164002192 -86685662 + AT_rich Low_complexity Low_complexity 1 22 0 360 276 52 39 chr2 164002197 164002346 -86685508 + MER5A DNA MER1_type 27 185 -4 570 275 122 11 chr2 164003736 164003925 -86683929 - MIR SINE MIR -48 214 5 473 281 118 46 chr2 164004607 164004845 -86683009 + L2 LINE L2 2262 2516 -798 3984 214 60 13 chr2 164004945 164006153 -86681701 - L1M3 LINE L1 -733 5447 4088 3799 127 38 156 chr2 164006187 164007224 -86680630 + pTR5 LTR ERV1 6 277 -437 266 286 0 0 chr2 164007224 164007301 -86680553 + LTR30 LTR ERV1 544 620 -102 775 102 0 0 chr2 164007304 164007423 -86680431 + pTR5 LTR ERV1 48 400 -2038 2293 205 38 45 chr2 164007431 164008070 -86679784 - L1M3 LINE L1 -2104 4042 3409 1577 148 72 0 chr2 164008140 164008403 -86679451 - AluSx SINE Alu -30 282 1 22 80 0 0 chr2 164008498 164008548 -86679306 + AT_rich Low_complexity Low_complexity 1 50 0 6638 55 4 0 chr2 164008735 164009739 -86678115 - L1PA7 LINE L1 -4 6150 5124 220 250 17 0 chr2 164010507 164010567 -86677287 + (TA)n Simple_repeat Simple_repeat 1 61 0 1076 161 0 32 chr2 164010658 164010844 -86677010 - AluJb SINE Alu -127 185 6 24 32 0 0 chr2 164015711 164015742 -86672112 + AT_rich Low_complexity Low_complexity 1 31 0 273 261 62 0 chr2 164017222 164017287 -86670567 - L2 LINE L2 -60 3253 3185 288 324 36 14 chr2 164017332 164017471 -86670383 + MER117 DNA MER1_type 55 196 -1 222 270 40 40 chr2 164018134 164018208 -86669646 - MIR3 SINE MIR -46 162 89 25 0 0 0 chr2 164018279 164018304 -86669550 + AT_rich Low_complexity Low_complexity 1 25 0 646 241 86 0 chr2 164019205 164019367 -86668487 - MIR SINE MIR -46 216 41 349 348 75 38 chr2 164019452 164019771 -86668083 - L2 LINE L2 -2316 998 668 264 329 12 0 chr2 164019836 164019918 -86667936 + HAL1 LINE L1 1 83 -2424 252 0 0 0 chr2 164020154 164020182 -86667672 + (A)n Simple_repeat Simple_repeat 1 28 0 1849 195 54 13 chr2 164020587 164020950 -86666904 + MLT2B2 LTR ERVL 1 378 -36 493 76 25 0 chr2 164020950 164021029 -86666825 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 1849 195 54 13 chr2 164021029 164021066 -86666788 + MLT2B2 LTR ERVL 378 412 -2 821 323 91 15 chr2 164021077 164021691 -86666163 + HAL1 LINE L1 1071 1731 -776 231 234 7 124 chr2 164022078 164022223 -86665631 + HAL1b LINE L1 775 902 -446 577 296 61 47 chr2 164022509 164023002 -86664852 + L1MC/D LINE L1 5315 5814 -1994 525 279 17 17 chr2 164023141 164023313 -86664541 + MER97a DNA MER1_type? 8 179 -715 225 198 99 25 chr2 164023393 164023474 -86664380 + Charlie8 DNA MER1_type 381 467 -1950 816 283 66 7 chr2 164024076 164024362 -86663492 + L2 LINE L2 3011 3313 0 24 0 0 0 chr2 164024820 164024844 -86663010 + AT_rich Low_complexity Low_complexity 1 24 0 746 282 49 76 chr2 164026039 164026470 -86661384 - LTR16A LTR ERVL -2 455 29 1407 187 88 54 chr2 164026482 164026835 -86661019 - MLT1A1 LTR MaLR 0 365 1 1235 184 58 19 chr2 164027038 164027347 -86660507 + MER33 DNA MER1_type 4 324 0 1567 203 13 45 chr2 164027532 164027907 -86659947 - MLT1A2 LTR MaLR -11 363 1 218 302 0 0 chr2 164029015 164029078 -86658776 - MIR SINE MIR -6 256 194 222 91 0 0 chr2 164029458 164029491 -86658363 + (TC)n Simple_repeat Simple_repeat 2 34 0 727 272 136 0 chr2 164029599 164029805 -86658049 - MIR SINE MIR -11 251 18 183 254 68 0 chr2 164029822 164029881 -86657973 - MIR SINE MIR -126 136 74 738 315 95 35 chr2 164030066 164030619 -86657235 + L2 LINE L2 2455 3056 -257 2086 107 0 0 chr2 164031134 164031404 -86656450 - AluSc SINE Alu -39 270 1 236 299 29 72 chr2 164031459 164031666 -86656188 - MARNA DNA Mariner -143 443 246 213 139 0 0 chr2 164031708 164031751 -86656103 + (CTAG)n Simple_repeat Simple_repeat 2 44 0 250 236 42 28 chr2 164032192 164032264 -86655590 + MIR SINE MIR 184 256 -6 1112 103 12 6 chr2 164032377 164032542 -86655312 + L1PA10 LINE L1 5998 6163 -5 2318 202 146 40 chr2 164032835 164033528 -86654326 - LTR41 LTR ERVL -6 767 2 33 25 0 0 chr2 164033856 164033896 -86653958 + AT_rich Low_complexity Low_complexity 1 40 0 2432 50 0 10 chr2 164034200 164034499 -86653355 + AluY SINE Alu 1 296 -15 243 284 269 0 chr2 164034985 164035126 -86652728 - MIR SINE MIR -48 214 36 455 266 73 57 chr2 164036253 164036382 -86651472 - MIR3 SINE MIR 0 208 74 1895 134 31 0 chr2 164036382 164036674 -86651180 - AluSx SINE Alu -11 301 1 455 266 73 57 chr2 164036674 164036721 -86651133 - MIR3 SINE MIR -134 74 29 1521 242 60 20 chr2 164037791 164038329 -86649525 + MLT1E LTR MaLR 1 591 -2 365 290 20 20 chr2 164038356 164038456 -86649398 - MIR SINE MIR -65 143 44 700 292 69 38 chr2 164040004 164040094 -86647760 - L3 LINE CR1 -155 1422 1336 1816 163 4 0 chr2 164040094 164040395 -86647459 - AluSx SINE Alu 0 307 6 700 292 69 38 chr2 164040395 164040594 -86647260 - L3 LINE CR1 -241 1336 1123 620 265 169 58 chr2 164040594 164040937 -86646917 + MLT1J LTR MaLR 1 381 -130 334 250 12 0 chr2 164041849 164041929 -86645925 + MER117 DNA MER1_type 6 86 -111 275 250 46 172 chr2 164042702 164042778 -86645076 + L2 LINE L2 3005 3089 -224 2750 63 0 0 chr2 164042778 164043129 -86644725 + L1PA5 LINE L1 5802 6152 -2 275 250 46 172 chr2 164043129 164043400 -86644454 + L2 LINE L2 3089 3308 -5 21 0 0 0 chr2 164046177 164046198 -86641656 + AT_rich Low_complexity Low_complexity 1 21 0 1658 206 0 6 chr2 164047832 164048143 -86639711 + AluJo SINE Alu 1 309 -3 185 0 0 39 chr2 164048149 164048175 -86639679 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 369 128 117 0 chr2 164048479 164048573 -86639281 + L1MA7 LINE L1 6183 6287 -4 216 200 0 0 chr2 164048984 164049044 -86638810 + (CAT)n Simple_repeat Simple_repeat 2 61 0 1197 224 26 0 chr2 164050264 164050536 -86637318 + L1ME3A LINE L1 5878 6156 -14 251 329 0 0 chr2 164050769 164050854 -86637000 - MIR SINE MIR -2 260 176 23 0 0 0 chr2 164051398 164051421 -86636433 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 164053385 164053407 -86634447 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 164053495 164053521 -86634333 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr2 164053832 164053864 -86633990 + AT_rich Low_complexity Low_complexity 1 32 0 280 289 21 70 chr2 164055501 164055643 -86632211 + MER5A DNA MER1_type 7 141 -48 419 183 87 17 chr2 164055851 164055966 -86631888 + MIR SINE MIR 69 191 -71 443 311 56 20 chr2 164056053 164056249 -86631605 + MIR SINE MIR 20 222 -40 1170 288 126 35 chr2 164057331 164057967 -86629887 + L3 LINE CR1 795 1488 -89 308 293 72 8 chr2 164058389 164058508 -86629346 - MIR SINE MIR -17 191 49 372 22 0 0 chr2 164060429 164060474 -86627380 + (CA)n Simple_repeat Simple_repeat 1 45 0 33 100 0 0 chr2 164060722 164060832 -86627022 + AT_rich Low_complexity Low_complexity 1 110 0 250 220 20 0 chr2 164062056 164062106 -86625748 - L2 LINE L2 0 3313 3263 271 236 0 0 chr2 164063582 164063637 -86624217 + L2 LINE L2 3218 3272 0 279 286 22 62 chr2 164064374 164064552 -86623302 + L1MC/D LINE L1 5402 5572 -594 27 29 0 0 chr2 164064689 164064723 -86623131 + AT_rich Low_complexity Low_complexity 1 34 0 25 0 0 0 chr2 164065194 164065219 -86622635 + AT_rich Low_complexity Low_complexity 1 25 0 31 0 0 0 chr2 164066253 164066284 -86621570 + AT_rich Low_complexity Low_complexity 1 31 0 264 247 35 0 chr2 164066507 164066592 -86621262 - L1ME1 LINE L1 -7 6159 6072 * 298 209 82 82 chr2 164066572 164066602 -86621252 - L1MA10 LINE L1 -56 6278 6249 1234 207 27 65 chr2 164066602 164066955 -86620899 - L1ME1 LINE L1 -69 6097 5760 489 226 48 78 chr2 164067851 164068081 -86619773 - MIR SINE MIR -31 231 9 25 75 0 0 chr2 164068547 164068600 -86619254 + AT_rich Low_complexity Low_complexity 1 53 0 282 143 0 0 chr2 164070279 164070328 -86617526 + (CA)n Simple_repeat Simple_repeat 2 50 0 708 266 68 0 chr2 164070935 164071127 -86616727 + MER63A DNA MER1_type 5 209 -1 192 263 93 110 chr2 164071293 164071529 -86616325 + L2 LINE L2 2820 3051 -221 30 45 0 0 chr2 164073835 164073879 -86613975 + AT_rich Low_complexity Low_complexity 1 44 0 2122 120 0 13 chr2 164074627 164074927 -86612927 - AluSq SINE Alu -17 296 1 324 294 55 9 chr2 164074983 164075092 -86612762 + L2 LINE L2 3199 3312 -1 281 278 0 22 chr2 164075094 164075184 -86612670 + GA-rich Low_complexity Low_complexity 1 88 0 23 0 0 0 chr2 164075262 164075285 -86612569 + AT_rich Low_complexity Low_complexity 1 23 0 1763 129 0 36 chr2 164075703 164075981 -86611873 + AluJb SINE Alu 15 282 -30 430 282 67 29 chr2 164076229 164076631 -86611223 + L1ME4a LINE L1 5414 5857 -264 2118 106 0 0 chr2 164076799 164077126 -86610728 + AluSx SINE Alu 1 327 0 1883 202 58 0 chr2 164077139 164077549 -86610305 - MER63B DNA MER1_type 0 436 3 24 0 0 0 chr2 164078085 164078109 -86609745 + AT_rich Low_complexity Low_complexity 1 24 0 502 170 44 175 chr2 164079364 164079570 -86608284 - MIR SINE MIR -49 213 35 1149 204 82 99 chr2 164079606 164079893 -86607961 - MLT1B LTR MaLR -5 385 105 2240 101 7 0 chr2 164079893 164080189 -86607665 - AluSx SINE Alu -14 298 1 1149 204 82 99 chr2 164080189 164080293 -86607561 - MLT1B LTR MaLR -285 105 1 1892 222 14 63 chr2 164080293 164080784 -86607070 - MLT1B-int LTR MaLR 0 1735 1269 374 272 0 0 chr2 164080886 164080978 -86606876 - MLT1B-int LTR MaLR -968 767 676 1331 159 168 9 chr2 164081034 164081607 -86606247 - MLT1-int LTR MaLR -485 886 16 223 296 80 0 chr2 164082092 164082180 -86605674 + MIR3 SINE MIR 108 202 -6 198 0 0 0 chr2 164082633 164082655 -86605199 + (CAA)n Simple_repeat Simple_repeat 3 24 0 426 305 7 26 chr2 164083365 164083519 -86604335 - MER5B DNA MER1_type 0 178 28 580 270 107 10 chr2 164083822 164084018 -86603836 - MIR SINE MIR -21 241 27 27 0 0 0 chr2 164084718 164084745 -86603109 + AT_rich Low_complexity Low_complexity 1 27 0 2209 106 3 3 chr2 164085848 164086299 -86601555 - AluY SINE Alu 0 451 1 206 326 43 22 chr2 164086343 164086435 -86601419 + L2 LINE L2 3160 3253 -19 204 40 0 0 chr2 164086441 164086466 -86601388 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 314 326 54 33 chr2 164087048 164087232 -86600622 - MIR SINE MIR -46 216 29 315 0 0 0 chr2 164088528 164088563 -86599291 + (TG)n Simple_repeat Simple_repeat 1 35 0 795 208 64 2 chr2 164088617 164088883 -86598971 - MER58B DNA MER1_type 0 341 1 645 260 68 16 chr2 164088937 164089129 -86598725 + MIR SINE MIR 59 260 -2 262 211 0 40 chr2 164090005 164090081 -86597773 + (CGGG)n Simple_repeat Simple_repeat 2 74 0 503 301 65 27 chr2 164092196 164092382 -86595472 - L2 LINE L2 0 3313 3121 376 313 178 0 chr2 164093087 164093295 -86594559 + MIR SINE MIR 2 246 -16 507 73 0 0 chr2 164093392 164093460 -86594394 + (TA)n Simple_repeat Simple_repeat 1 68 0 320 264 102 42 chr2 164093679 164093895 -86593959 - Charlie7 DNA MER1_type -669 1943 1715 306 0 0 0 chr2 164093897 164093931 -86593923 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 7729 19 0 0 chr2 164093931 164095518 -86592336 - L1PA3 LINE L1 -13 6142 4556 3899 103 67 62 chr2 164095518 164096254 -86591600 - LTR1 LTR ERV1 -46 739 1 16864 147 41 18 chr2 164096297 164098018 -86589836 - HUERS-P2 LTR ERV1 0 3088 1277 2193 132 0 3 chr2 164098018 164098329 -86589525 - AluSx SINE Alu -2 310 1 16864 147 41 18 chr2 164098329 164099388 -86588466 - HUERS-P2 LTR ERV1 -1811 1277 244 768 183 0 54 chr2 164099444 164099630 -86588224 + pTR5 LTR ERV1 743 918 -1520 1827 122 4 40 chr2 164099640 164099918 -86587936 + AluSx SINE Alu 31 298 -14 361 196 80 80 chr2 164099918 164100030 -86587824 - HUERS-P2 LTR ERV1 -2976 112 1 3561 121 64 88 chr2 164100045 164100765 -86587089 - LTR1 LTR ERV1 -67 718 16 305 215 283 29 chr2 164100872 164101151 -86586703 + Charlie7 DNA MER1_type 2234 2583 -29 42 0 0 0 chr2 164101152 164101194 -86586660 + AT_rich Low_complexity Low_complexity 1 42 0 4944 88 22 0 chr2 164101198 164101876 -86585978 - L1PA13 LINE L1 -6 6157 5465 3380 195 47 6 chr2 164102292 164102913 -86584941 + MER82 DNA MER2_type 7 652 -1 1351 219 19 35 chr2 164102916 164103285 -86584569 + MLT1A1 LTR MaLR 3 365 0 2488 71 0 0 chr2 164103540 164103835 -86584019 + AluY SINE Alu 2 296 -15 290 51 76 13 chr2 164103835 164103914 -86583940 + (TA)n Simple_repeat Simple_repeat 1 84 0 443 380 44 0 chr2 164106157 164106315 -86581539 + L2 LINE L2 3107 3271 -1 180 209 70 0 chr2 164106382 164106425 -86581429 - MIR SINE MIR -54 208 163 438 333 72 36 chr2 164106432 164106654 -86581200 + MLT1K LTR MaLR 2 231 -357 2063 108 0 11 chr2 164106667 164106945 -86580909 + AluSx SINE Alu 27 301 -11 307 224 85 30 chr2 164107039 164107197 -86580657 + MLT1K LTR MaLR 421 558 -30 245 330 12 18 chr2 164107204 164107312 -86580542 - MIR SINE MIR -31 177 71 1514 300 65 2 chr2 164108560 164109034 -86578820 + LTR33 LTR ERVL 2 505 -16 26 50 0 0 chr2 164109669 164109709 -86578145 + AT_rich Low_complexity Low_complexity 1 40 0 1497 195 23 64 chr2 164111017 164111407 -86576447 + MLT1A2 LTR MaLR 1 374 0 29 0 0 0 chr2 164111507 164111536 -86576318 + AT_rich Low_complexity Low_complexity 1 29 0 1441 272 129 26 chr2 164111762 164112694 -86575160 + L2 LINE L2 2289 3313 0 297 0 0 0 chr2 164112779 164112812 -86575042 + (TA)n Simple_repeat Simple_repeat 1 33 0 23 68 0 0 chr2 164113507 164113551 -86574303 + AT_rich Low_complexity Low_complexity 1 44 0 1294 236 48 27 chr2 164113792 164114123 -86573731 - LTR40a LTR ERVL 0 519 182 235 257 0 43 chr2 164114104 164114174 -86573680 - LTR40b LTR ERVL -394 68 2 * 547 184 127 38 chr2 164114892 164115050 -86572804 - MER53 DNA DNA -5 184 13 282 223 107 0 chr2 164116454 164116557 -86571297 + Charlie7 DNA MER1_type 48 161 -2451 429 36 0 0 chr2 164116605 164116660 -86571194 + (TGG)n Simple_repeat Simple_repeat 1 55 0 1169 245 160 25 chr2 164116670 164117358 -86570496 + Charlie2a DNA MER1_type 77 900 -1962 408 203 99 35 chr2 164117486 164117688 -86570166 + Charlie2a DNA MER1_type 2234 2448 -414 452 287 69 40 chr2 164117900 164118166 -86569688 + MLT1H1 LTR MaLR 2 317 -232 508 248 293 9 chr2 164118173 164118508 -86569346 - Charlie7 DNA MER1_type -1967 645 216 626 199 26 7 chr2 164118527 164118678 -86569176 - Charlie2 DNA MER1_type -6 2856 2703 21 0 0 0 chr2 164120020 164120041 -86567813 + AT_rich Low_complexity Low_complexity 1 21 0 247 236 38 66 chr2 164120394 164120500 -86567354 + L1M4 LINE L1 4518 4620 -1526 34 42 0 0 chr2 164120565 164120613 -86567241 + AT_rich Low_complexity Low_complexity 1 48 0 428 256 69 96 chr2 164121601 164122007 -86565847 + MLT1J LTR MaLR 112 506 -5 4167 246 218 31 chr2 164124008 164124699 -86563155 - HAL1 LINE L1 -8 2499 1939 2166 112 0 0 chr2 164124699 164124995 -86562859 + AluSc SINE Alu 1 296 -13 4167 246 218 31 chr2 164124995 164126373 -86561481 - HAL1 LINE L1 -568 1939 42 358 368 97 16 chr2 164127301 164127548 -86560306 + L2 LINE L2 2594 2860 -454 21 36 0 0 chr2 164129392 164129420 -86558434 + AT_rich Low_complexity Low_complexity 1 28 0 268 247 57 32 chr2 164129801 164129959 -86557895 + Charlie7 DNA MER1_type 2449 2610 -2 24 67 0 0 chr2 164132354 164132399 -86555455 + AT_rich Low_complexity Low_complexity 1 45 0 333 246 162 14 chr2 164133625 164133767 -86554087 - MER103 DNA DNA -2 164 2 626 240 130 19 chr2 164139300 164139508 -86548346 - MIR SINE MIR -9 253 23 940 189 11 21 chr2 164139522 164139712 -86548142 - MER5A DNA MER1_type -1 188 1 24 32 0 0 chr2 164139987 164140018 -86547836 + AT_rich Low_complexity Low_complexity 1 31 0 1101 205 5 9 chr2 164142277 164142492 -86545362 - AluJb SINE Alu -13 299 86 26 0 0 0 chr2 164143081 164143107 -86544747 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr2 164143849 164143874 -86543980 + AT_rich Low_complexity Low_complexity 1 25 0 519 275 28 22 chr2 164144773 164144955 -86542899 - MER5A DNA MER1_type -5 184 2 196 341 22 22 chr2 164146551 164146642 -86541212 + L2 LINE L2 3001 3091 -181 1413 156 138 25 chr2 164147157 164147432 -86540422 + AluJb SINE Alu 1 306 -6 2196 98 3 0 chr2 164147876 164148173 -86539681 - AluSg1 SINE Alu -11 298 1 454 253 193 7 chr2 164148173 164148323 -86539531 + MER5A DNA MER1_type 12 189 0 2405 142 42 9 chr2 164148850 164149281 -86538573 - MER65A LTR ERV1 0 445 1 223 342 135 30 chr2 164152534 164152800 -86535054 + L3b LINE CR1 1145 1438 -145 21 89 0 0 chr2 164154471 164154527 -86533327 + AT_rich Low_complexity Low_complexity 1 56 0 452 264 74 25 chr2 164155317 164155480 -86532374 - MIR SINE MIR -50 212 42 180 0 0 0 chr2 164155682 164155702 -86532152 + (TAAAAA)n Simple_repeat Simple_repeat 4 23 0 23 33 0 0 chr2 164157433 164157463 -86530391 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr2 164159671 164159718 -86528136 + AT_rich Low_complexity Low_complexity 1 47 0 1306 157 66 7 chr2 164159727 164159864 -86527990 + L1MA9 LINE L1 6009 6136 -176 198 71 0 0 chr2 164159864 164159892 -86527962 + (CA)n Simple_repeat Simple_repeat 1 28 0 1306 157 66 7 chr2 164159892 164160040 -86527814 + L1MA9 LINE L1 6136 6311 -1 208 28 83 0 chr2 164160641 164160677 -86527177 + T-rich Low_complexity Low_complexity 2 40 0 317 221 30 92 chr2 164161697 164161828 -86526026 - L1MC4 LINE L1 -1306 6736 6614 452 318 71 52 chr2 164163191 164163443 -86524411 + L3b LINE CR1 1170 1426 -157 276 100 0 0 chr2 164163785 164163825 -86524029 + (TG)n Simple_repeat Simple_repeat 2 41 0 227 336 175 49 chr2 164164065 164164208 -86523646 - L2 LINE L2 -2 3270 3110 1198 302 66 59 chr2 164164347 164165192 -86522662 - L2 LINE L2 -559 2755 1905 2099 191 21 23 chr2 164166337 164166772 -86521082 + Tigger2a DNA MER2_type 1 434 0 559 281 20 81 chr2 164169203 164169449 -86518405 - MIR SINE MIR 0 262 32 26 50 0 0 chr2 164170422 164170462 -86517392 + AT_rich Low_complexity Low_complexity 1 40 0 200 279 73 0 chr2 164170500 164170568 -86517286 - L2 LINE L2 -38 3275 3203 214 0 81 27 chr2 164170838 164170875 -86516979 + T-rich Low_complexity Low_complexity 2 40 0 1445 51 0 0 chr2 164170889 164171065 -86516789 - L1PA5 LINE L1 -6 6148 5973 238 241 172 11 chr2 164173306 164173393 -86514461 + MIR SINE MIR 45 145 -63 210 118 0 0 chr2 164174297 164174331 -86513523 + (TG)n Simple_repeat Simple_repeat 1 34 0 528 308 50 22 chr2 164174427 164174609 -86513245 + MIR SINE MIR 26 212 -50 310 214 10 143 chr2 164175870 164175913 -86511941 - L2 LINE L2 -2 3311 3287 2332 150 65 0 chr2 164175913 164176314 -86511540 + MSTA LTR MaLR 2 428 0 310 214 10 143 chr2 164176314 164176368 -86511486 - L2 LINE L2 -26 3287 3227 181 236 200 0 chr2 164179272 164179327 -86508527 + L3b LINE CR1 1479 1544 -39 478 306 106 26 chr2 164180405 164180896 -86506958 + L1MC/D LINE L1 2921 3450 -2696 5541 183 14 18 chr2 164181086 164183135 -86504719 + L1PA16 LINE L1 4126 6166 0 52 69 0 0 chr2 164183223 164183324 -86504530 + AT_rich Low_complexity Low_complexity 1 101 0 214 218 13 51 chr2 164183460 164183538 -86504316 + (CAAAT)n Simple_repeat Simple_repeat 5 79 0 190 238 426 8 chr2 164183839 164183961 -86503893 - MER5B DNA MER1_type 0 178 6 306 371 30 20 chr2 164184521 164184641 -86503213 + L1MC/D LINE L1 4648 4765 -1381 1919 141 10 0 chr2 164184641 164184938 -86502916 - AluSq SINE Alu -13 300 1 306 371 30 20 chr2 164184938 164185116 -86502738 + L1MC/D LINE L1 4765 4949 -1197 557 360 41 0 chr2 164185592 164185884 -86501970 + L1MC/D LINE L1 5451 5754 -2054 21 82 0 0 chr2 164185934 164185983 -86501871 + AT_rich Low_complexity Low_complexity 1 49 0 223 229 0 33 chr2 164186117 164186178 -86501676 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 1174 197 29 35 chr2 164186345 164186660 -86501194 + LTR56 LTR ERV1 1 313 -132 232 170 0 0 chr2 164186660 164186707 -86501147 + A-rich Low_complexity Low_complexity 1 47 0 401 167 60 12 chr2 164186746 164186830 -86501024 + LTR23 LTR ERV1 350 437 0 27 29 0 0 chr2 164187190 164187224 -86500630 + AT_rich Low_complexity Low_complexity 1 34 0 1925 122 56 0 chr2 164187620 164187907 -86499947 + AluSg SINE Alu 1 303 -7 207 0 0 0 chr2 164190786 164190809 -86497045 + (A)n Simple_repeat Simple_repeat 1 23 0 292 219 188 21 chr2 164190992 164191088 -86496766 - MIR SINE MIR -76 132 21 2069 132 3 0 chr2 164191606 164191910 -86495944 + AluSx SINE Alu 1 305 -7 1368 173 155 82 chr2 164196376 164196861 -86490993 + MLT2B1 LTR ERVL 1 520 0 1995 148 0 0 chr2 164197443 164197747 -86490107 + AluJb SINE Alu 1 304 -8 3721 187 47 19 chr2 164198232 164199240 -86488614 - L1ME2 LINE L1 -9 6224 5191 2780 248 115 52 chr2 164199243 164201372 -86486482 - L1ME2 LINE L1 -2687 3528 1085 1271 329 60 25 chr2 164201410 164202251 -86485603 - L1ME2 LINE L1 -5491 905 36 34 55 0 0 chr2 164202362 164202417 -86485437 + AT_rich Low_complexity Low_complexity 1 55 0 234 91 0 0 chr2 164203325 164203358 -86484496 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 4990 204 36 2 chr2 164204115 164205213 -86482641 + L1PA16 LINE L1 3928 5063 -1083 4215 129 1 30 chr2 164205217 164205906 -86481948 + L1PA16 LINE L1 5489 6157 -9 252 143 0 0 chr2 164206214 164206256 -86481598 + (TA)n Simple_repeat Simple_repeat 2 43 0 254 295 76 19 chr2 164207398 164207503 -86480351 - L2 LINE L2 0 3272 3162 294 241 50 122 chr2 164207513 164207775 -86480079 - L2 LINE L2 -83 3230 2988 1698 167 3 40 chr2 164208340 164208640 -86479214 + AluJo SINE Alu 2 290 -22 285 224 86 115 chr2 164209022 164209196 -86478658 + MIR SINE MIR 7 175 -87 25 0 0 0 chr2 164211335 164211360 -86476494 + AT_rich Low_complexity Low_complexity 1 25 0 35 98 0 0 chr2 164211583 164211695 -86476159 + AT_rich Low_complexity Low_complexity 1 112 0 295 339 60 60 chr2 164212179 164212362 -86475492 - L3b LINE CR1 -118 1465 1283 2547 47 0 31 chr2 164213516 164213837 -86474017 - AluY SINE Alu 0 311 1 1737 159 14 3 chr2 164214088 164214371 -86473483 + AluJb SINE Alu 1 286 -26 204 184 0 0 chr2 164214425 164214474 -86473380 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 601 290 85 104 chr2 164214804 164215846 -86472008 + L2 LINE L2 2292 3312 -1 202 283 19 19 chr2 164215951 164216004 -86471850 + L3b LINE CR1 1517 1569 -14 249 139 0 0 chr2 164216454 164216497 -86471357 - MIR SINE MIR -102 160 118 24 32 0 0 chr2 164218388 164218419 -86469435 + AT_rich Low_complexity Low_complexity 1 31 0 227 321 58 88 chr2 164220280 164220691 -86467163 - L2 LINE L2 -47 3225 2827 1896 195 43 37 chr2 164220911 164221373 -86466481 + MLT1C LTR MaLR 3 467 0 1213 266 71 99 chr2 164222919 164223452 -86464402 - MLT1H1 LTR MaLR 0 555 38 548 231 33 47 chr2 164223528 164223740 -86464114 + L1MC5 LINE L1 7653 7861 -100 24 53 0 0 chr2 164223745 164223783 -86464071 + AT_rich Low_complexity Low_complexity 1 38 0 19327 113 12 24 chr2 164224451 164228386 -86459468 - L1PA8 LINE L1 0 6172 2280 23 33 0 0 chr2 164229508 164229538 -86458316 + AT_rich Low_complexity Low_complexity 1 30 0 294 29 0 0 chr2 164229611 164229646 -86458208 + (TG)n Simple_repeat Simple_repeat 2 36 0 1206 170 5 15 chr2 164230319 164230559 -86457295 + AluJb SINE Alu 87 324 0 229 179 51 0 chr2 164230726 164230765 -86457089 + L2 LINE L2 3196 3236 -36 280 224 0 0 chr2 164230957 164231015 -86456839 + MLT1J1 LTR MaLR 63 120 -326 2336 100 0 3 chr2 164231325 164231635 -86456219 + AluSc SINE Alu 1 309 0 1167 256 30 13 chr2 164232002 164232303 -86455551 + MLT1C LTR MaLR 162 467 0 363 296 57 61 chr2 164232738 164232968 -86454886 + MIR SINE MIR 33 261 -1 336 94 0 0 chr2 164234020 164234073 -86453781 + (GA)n Simple_repeat Simple_repeat 1 53 0 714 128 0 0 chr2 164234299 164234416 -86453438 + L1MA7 LINE L1 6175 6291 0 184 222 16 16 chr2 164234829 164234892 -86452962 + CT-rich Low_complexity Low_complexity 4 66 0 207 191 0 0 chr2 164235290 164235337 -86452517 + A-rich Low_complexity Low_complexity 1 47 0 292 293 0 24 chr2 164236717 164236799 -86451055 + MIR3 SINE MIR 123 202 -6 1797 136 36 19 chr2 164237760 164238091 -86449763 - THE1C LTR MaLR 0 375 1 2028 183 58 5 chr2 164238789 164239199 -86448655 + MSTB1 LTR MaLR 1 432 0 1686 201 84 3 chr2 164239242 164239575 -86448279 - MLT1A1 LTR MaLR -3 362 3 2106 105 0 81 chr2 164240024 164240358 -86447496 - AluY SINE Alu -4 307 1 1436 213 49 17 chr2 164240366 164240653 -86447201 - AluJo SINE Alu -6 296 1 292 302 69 57 chr2 164241119 164241184 -86446670 - MER5A DNA MER1_type -2 187 124 10743 36 1 130 chr2 164241184 164242776 -86445078 + SVA Other Other 1 1386 0 292 302 69 57 chr2 164242776 164242869 -86444985 - MER5A DNA MER1_type -65 124 27 299 305 0 0 chr2 164242872 164242954 -86444900 + (TG)n Simple_repeat Simple_repeat 1 82 0 7780 43 20 2 chr2 164243035 164244747 -86443107 + L1PA5 LINE L1 4426 6154 0 316 243 132 59 chr2 164245110 164245246 -86442608 - L2 LINE L2 0 3313 3168 875 319 8 0 chr2 164245529 164245789 -86442065 - MIR SINE MIR 0 262 1 293 317 55 48 chr2 164245861 164246006 -86441848 - L2 LINE L2 -588 2726 2581 733 219 123 68 chr2 164246007 164246364 -86441490 + MLT1F1 LTR MaLR 32 409 -158 276 248 80 80 chr2 164246331 164246468 -86441386 + MLT1F1 LTR MaLR 142 278 -289 * 657 255 10 10 chr2 164246465 164246639 -86441215 + MLT1F1 LTR MaLR 419 564 -3 411 113 0 0 chr2 164249324 164249386 -86438468 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 344 275 101 50 chr2 164249399 164249617 -86438237 - L2 LINE L2 -56 3257 3029 381 43 0 0 chr2 164251169 164251216 -86436638 + (TG)n Simple_repeat Simple_repeat 2 48 0 188 200 89 0 chr2 164253168 164253213 -86434641 + L2 LINE L2 3265 3313 0 400 18 35 0 chr2 164253461 164253518 -86434336 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 186 43 0 0 chr2 164253541 164253564 -86434290 + (CAT)n Simple_repeat Simple_repeat 3 25 0 261 366 10 10 chr2 164255488 164255589 -86432265 + MIR3 SINE MIR 12 112 -96 324 64 0 0 chr2 164255732 164255779 -86432075 + (CA)n Simple_repeat Simple_repeat 2 48 0 2361 138 43 17 chr2 164256115 164256536 -86431318 + MSTB1 LTR MaLR 1 432 0 255 266 21 11 chr2 164258326 164258420 -86429434 + MER103 DNA DNA 2 96 -70 208 268 0 0 chr2 164259062 164259103 -86428751 + L3 LINE CR1 1530 1570 -7 1370 203 102 42 chr2 164259882 164260360 -86427494 + MER84 LTR ERV1 1 507 0 1449 126 36 0 chr2 164260783 164261005 -86426849 + MER30 DNA MER1_type 1 230 0 1785 176 28 17 chr2 164261579 164262020 -86425834 + MER61D LTR ERV1 2 501 0 341 246 115 46 chr2 164262131 164262261 -86425593 + MER61D-int LTR ERV1 113 251 -6840 * 1437 234 58 81 chr2 164262257 164262976 -86424878 + MER61D-int LTR ERV1 224 887 -2331 12918 170 29 46 chr2 164262979 164267751 -86420103 + HUERS-P3b LTR ERV1 609 6994 -2 1856 160 24 21 chr2 164267754 164268189 -86419665 + MER61D LTR ERV1 1 501 0 555 191 0 0 chr2 164268448 164268537 -86419317 + 5S rRNA rRNA 2 90 -31 575 294 50 28 chr2 164269144 164269362 -86418492 + MIR SINE MIR 32 254 -8 192 374 206 14 chr2 164269489 164269708 -86418146 - L3b LINE CR1 -197 1386 1126 333 0 0 0 chr2 164269828 164269865 -86417989 + (TTTAA)n Simple_repeat Simple_repeat 5 41 0 348 252 153 91 chr2 164270179 164270532 -86417322 + MLT1K LTR MaLR 214 588 0 197 241 130 0 chr2 164271560 164271614 -86416240 + L2 LINE L2 3210 3270 -43 333 128 84 11 chr2 164271616 164271897 -86415957 + (TA)n Simple_repeat Simple_repeat 1 301 0 218 160 20 0 chr2 164271918 164271968 -86415886 + (TGAA)n Simple_repeat Simple_repeat 1 51 0 197 355 50 28 chr2 164272706 164272847 -86415007 + L2 LINE L2 2578 2721 -593 1819 199 14 19 chr2 164273015 164273377 -86414477 - MLT1A1 LTR MaLR -2 363 4 21 82 0 0 chr2 164273377 164273426 -86414428 + AT_rich Low_complexity Low_complexity 1 49 0 242 269 51 26 chr2 164273722 164273800 -86414054 - L2 LINE L2 0 3272 3193 652 303 23 34 chr2 164274376 164274640 -86413214 + Charlie8 DNA MER1_type 3 263 -2154 1079 246 201 29 chr2 164278331 164278750 -86409104 + MER20B DNA MER1_type 3 493 -290 21 0 0 0 chr2 164278858 164278879 -86408975 + AT_rich Low_complexity Low_complexity 1 21 0 957 200 94 0 chr2 164279485 164279720 -86408134 + MER20B DNA MER1_type 527 783 0 188 286 0 18 chr2 164280133 164280189 -86407665 - MIR SINE MIR -96 166 112 202 316 25 0 chr2 164281861 164281940 -86405914 + L3b LINE CR1 1285 1365 -218 195 42 0 0 chr2 164282992 164283016 -86404838 + (A)n Simple_repeat Simple_repeat 1 24 0 192 77 0 0 chr2 164284655 164284681 -86403173 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 1338 103 0 3 chr2 164284681 164285042 -86402812 + (TTCC)n Simple_repeat Simple_repeat 1 360 0 439 241 35 0 chr2 164285042 164285158 -86402696 - FLAM_A SINE Alu -13 120 1 1196 205 80 0 chr2 164286008 164286296 -86401558 + MER5C DNA MER1_type 11 321 -3 229 353 39 10 chr2 164287605 164287707 -86400147 - L2 LINE L2 -13 3259 3155 658 261 21 64 chr2 164288318 164288552 -86399302 + MIR SINE MIR 29 252 -10 201 171 0 0 chr2 164290302 164290337 -86397517 + T-rich Low_complexity Low_complexity 1 35 0 34 55 0 0 chr2 164290434 164290489 -86397365 + AT_rich Low_complexity Low_complexity 1 55 0 386 262 63 49 chr2 164290492 164290734 -86397120 + L1ME LINE L1 5386 5635 -535 561 345 67 58 chr2 164291374 164291956 -86395898 + L2 LINE L2 2091 2677 -637 22 35 0 0 chr2 164291956 164291985 -86395869 + AT_rich Low_complexity Low_complexity 1 29 0 1379 209 3 33 chr2 164291993 164292294 -86395560 + AluJo SINE Alu 5 296 -16 187 327 39 52 chr2 164292604 164292757 -86395097 + L2 LINE L2 3123 3273 -40 1624 178 12 15 chr2 164293132 164293475 -86394379 - L1MA4 LINE L1 -9 6291 5950 252 86 0 0 chr2 164295044 164295079 -86392775 + (TC)n Simple_repeat Simple_repeat 2 36 0 403 312 142 27 chr2 164295587 164295997 -86391857 - LTR16A1 LTR ERVL 0 457 1 7428 91 6 23 chr2 164297483 164298572 -86389282 - MER11C LTR ERVK 0 1071 1 599 232 107 0 chr2 164299422 164299590 -86388264 - MER5A DNA MER1_type -3 186 1 309 337 105 57 chr2 164300091 164300902 -86386952 - L2 LINE L2 -462 2852 2003 23 54 0 0 chr2 164301057 164301094 -86386760 + AT_rich Low_complexity Low_complexity 1 37 0 198 0 0 0 chr2 164301984 164302006 -86385848 + (CA)n Simple_repeat Simple_repeat 1 22 0 477 328 15 18 chr2 164303938 164304180 -86383674 + HAL1b LINE L1 382 1715 -758 226 57 29 0 chr2 164304522 164304557 -86383297 - MADE1 DNA Mariner 0 80 45 331 321 48 71 chr2 164304916 164305312 -86382542 + L1MC/D LINE L1 2223 2609 -3537 986 325 105 30 chr2 164305374 164307667 -86380187 + L1MC/D LINE L1 2678 5141 -1005 1288 246 86 34 chr2 164307794 164308238 -86379616 + L1MC/D LINE L1 5321 5787 -2021 1473 84 44 22 chr2 164309626 164309851 -86378003 - MER30 DNA MER1_type 0 230 1 1767 265 84 46 chr2 164312078 164312927 -86374927 - L2 LINE L2 -392 2922 2035 3085 108 9 0 chr2 164312927 164313379 -86374475 + L1PA11 LINE L1 5717 6172 -2 1767 265 84 46 chr2 164313379 164313437 -86374417 - L2 LINE L2 -1279 2035 1981 5730 39 0 0 chr2 164313766 164314453 -86373401 - L1PA3 LINE L1 -5 6150 5464 264 59 0 0 chr2 164314782 164314816 -86373038 + (CA)n Simple_repeat Simple_repeat 1 34 0 553 269 19 66 chr2 164315184 164315396 -86372458 + MIR SINE MIR 60 261 -1 384 223 100 31 chr2 164315876 164316006 -86371848 - MIR SINE MIR -8 254 116 321 330 17 0 chr2 164316710 164316828 -86371026 - MER103 DNA DNA -43 123 4 1531 154 26 48 chr2 164318461 164318772 -86369082 - THE1C LTR MaLR 0 375 72 785 293 9 14 chr2 164318988 164319210 -86368644 - MIR SINE MIR -1 261 41 707 285 81 29 chr2 164320158 164320404 -86367450 + MIR SINE MIR 4 262 0 704 305 144 30 chr2 164321784 164322250 -86365604 + LTR33 LTR ERVL 3 521 0 279 0 0 0 chr2 164322399 164322430 -86365424 + (TAA)n Simple_repeat Simple_repeat 3 33 0 196 266 77 89 chr2 164323643 164323812 -86364042 - MIR SINE MIR -93 169 3 1070 253 113 51 chr2 164323983 164324496 -86363358 + MLT1E3 LTR MaLR 7 551 -73 2159 84 7 0 chr2 164324927 164325213 -86362641 + AluY SINE Alu 24 311 0 25 31 0 0 chr2 164326916 164326948 -86360906 + AT_rich Low_complexity Low_complexity 1 32 0 630 275 48 39 chr2 164327025 164327232 -86360622 - MIR SINE MIR 0 262 54 839 284 90 78 chr2 164327793 164328381 -86359473 - MLT1G1 LTR MaLR 0 595 1 185 333 0 23 chr2 164329093 164329180 -86358674 - L2 LINE L2 -316 2956 2872 21 82 0 0 chr2 164330215 164330264 -86357590 + AT_rich Low_complexity Low_complexity 1 49 0 2060 109 0 48 chr2 164330649 164330960 -86356894 - AluSg SINE Alu -14 296 1 234 339 48 4 chr2 164331029 164331256 -86356598 - L1ME LINE L1 -249 5872 5636 28 29 0 0 chr2 164331968 164332003 -86355851 + AT_rich Low_complexity Low_complexity 1 35 0 360 368 112 21 chr2 164333351 164333636 -86354218 - L2 LINE L2 -830 2484 2174 27 0 0 0 chr2 164333677 164333704 -86354150 + AT_rich Low_complexity Low_complexity 1 27 0 479 219 42 0 chr2 164334419 164334515 -86353339 - AluJo SINE Alu -101 211 112 30 0 0 0 chr2 164334729 164334759 -86353095 + AT_rich Low_complexity Low_complexity 1 30 0 306 50 0 0 chr2 164335120 164335160 -86352694 + (TCC)n Simple_repeat Simple_repeat 2 41 0 482 303 131 17 chr2 164335319 164335649 -86352205 - L2 LINE L2 -157 3156 2779 243 0 0 0 chr2 164336628 164336655 -86351199 + (A)n Simple_repeat Simple_repeat 1 27 0 217 283 22 98 chr2 164337017 164337062 -86350792 - MIR3 SINE MIR -11 197 161 334 286 112 6 chr2 164337062 164337240 -86350614 - MER117 DNA MER1_type 0 197 1 217 283 22 98 chr2 164337240 164337286 -86350568 - MIR3 SINE MIR -47 161 113 6398 182 20 7 chr2 164337408 164338731 -86349123 - L1 LINE L1 -747 5399 4059 243 0 0 0 chr2 164339266 164339293 -86348561 + (A)n Simple_repeat Simple_repeat 1 27 0 228 304 0 76 chr2 164339654 164339699 -86348155 - MIR3 SINE MIR -11 197 161 334 286 112 6 chr2 164339699 164339877 -86347977 - MER117 DNA MER1_type 0 197 1 228 304 0 76 chr2 164339877 164339923 -86347931 - MIR3 SINE MIR -47 161 113 271 340 94 21 chr2 164340510 164340701 -86347153 + L3 LINE CR1 601 805 -772 191 158 0 26 chr2 164340780 164340818 -86347036 - L3 LINE CR1 -1238 339 303 755 122 0 32 chr2 164341454 164341577 -86346277 - AluSx SINE Alu 0 312 194 1176 78 0 0 chr2 164341578 164341719 -86346135 - AluSx SINE Alu -172 141 1 3969 152 27 24 chr2 164342851 164343600 -86344254 - L1MA7 LINE L1 -2 6289 5539 253 302 16 0 chr2 164343824 164343887 -86343967 - MIR3 SINE MIR -5 203 140 280 217 29 14 chr2 164344445 164344514 -86343340 + LTR37B LTR ERV1 13 82 -386 522 333 31 12 chr2 164346351 164346609 -86341245 + L1MEd LINE L1 4 266 -5853 239 268 18 0 chr2 164346632 164346688 -86341166 + L1MEd LINE L1 328 384 -5735 356 302 29 36 chr2 164346778 164346917 -86340937 + L1MEd LINE L1 483 620 -5499 348 325 58 38 chr2 164347134 164347695 -86340159 + L1MEd LINE L1 911 1575 -915 387 323 30 0 chr2 164348300 164348478 -86339376 + L1ME3A LINE L1 5480 5664 -506 564 233 33 0 chr2 164348579 164348699 -86339155 - MER5C DNA MER1_type -200 124 1 401 263 28 78 chr2 164348717 164348934 -86338920 + L1ME3A LINE L1 5665 5870 -300 258 73 36 18 chr2 164349003 164349058 -86338796 + (TA)n Simple_repeat Simple_repeat 2 57 0 507 299 46 17 chr2 164350727 164350901 -86336953 + MIR3 SINE MIR 7 185 -23 2579 46 0 0 chr2 164351526 164351829 -86336025 + AluY SINE Alu 1 303 -8 21 71 0 0 chr2 164352318 164352360 -86335494 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr2 164354146 164354181 -86333673 + AT_rich Low_complexity Low_complexity 1 35 0 214 279 15 7 chr2 164354474 164354610 -86333244 + (TA)n Simple_repeat Simple_repeat 1 137 0 197 250 0 0 chr2 164354622 164354662 -86333192 + MIR3 SINE MIR 142 181 -27 435 233 78 0 chr2 164355220 164355323 -86332531 + MER94 DNA DNA 20 130 -4 225 0 0 0 chr2 164355583 164355608 -86332246 + (T)n Simple_repeat Simple_repeat 1 25 0 567 135 67 122 chr2 164356082 164356293 -86331561 + THE1C LTR MaLR 208 428 0 1078 226 8 12 chr2 164356293 164356404 -86331450 - L1 LINE L1 -2291 3855 3745 1710 183 45 15 chr2 164356404 164356737 -86331117 + MER2 DNA MER2_type 2 344 0 1078 226 8 12 chr2 164356737 164356882 -86330972 - L1 LINE L1 -2401 3745 3600 441 181 138 0 chr2 164357424 164357518 -86330336 - MER46A DNA MER2_type -129 107 1 205 97 0 0 chr2 164357979 164358010 -86329844 - MIR SINE MIR -108 154 124 490 266 88 57 chr2 164358069 164358261 -86329593 + MER58C DNA MER1_type 1 198 -17 21 36 0 0 chr2 164358559 164358587 -86329267 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 164359558 164359589 -86328265 + AT_rich Low_complexity Low_complexity 1 31 0 790 315 134 38 chr2 164359914 164360730 -86327124 - L2 LINE L2 -12 3301 2420 1627 114 38 0 chr2 164362437 164362701 -86325153 + L1MA5A LINE L1 6024 6297 0 21 0 0 0 chr2 164363762 164363783 -86324071 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 164364450 164364485 -86323369 + AT_rich Low_complexity Low_complexity 1 35 0 1011 224 88 81 chr2 164364671 164365216 -86322638 - MLT1H LTR MaLR 0 549 1 21 57 0 0 chr2 164365290 164365325 -86322529 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr2 164365427 164365464 -86322390 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr2 164366437 164366460 -86321394 + AT_rich Low_complexity Low_complexity 1 23 0 401 252 10 47 chr2 164367152 164367352 -86320502 + MER46C DNA MER2_type 93 336 -2 293 290 161 0 chr2 164368372 164368496 -86319358 - MIR3 SINE MIR -35 173 30 180 216 0 0 chr2 164370655 164370706 -86317148 + (AATTG)n Simple_repeat Simple_repeat 3 53 0 22 0 0 0 chr2 164372905 164372927 -86314927 + AT_rich Low_complexity Low_complexity 1 22 0 499 319 14 7 chr2 164373175 164373316 -86314538 + MIR SINE MIR 12 153 -109 21 0 0 0 chr2 164373343 164373364 -86314490 + AT_rich Low_complexity Low_complexity 1 21 0 1033 30 8 8 chr2 164373819 164373953 -86313901 + (TAGA)n Simple_repeat Simple_repeat 4 137 0 1678 168 10 45 chr2 164374016 164374347 -86313507 + AluJo SINE Alu 1 312 0 292 290 93 0 chr2 164374861 164374968 -86312886 - MIR SINE MIR -55 153 37 13264 31 1 0 chr2 164378168 164380524 -86307330 - L1PA3 LINE L1 0 6155 3805 14777 33 0 4 chr2 164380524 164382359 -86305495 + L1PA3 LINE L1 1971 3797 -2349 1778 178 51 18 chr2 164382732 164382910 -86304944 - MER7A DNA MER2_type -2692 346 152 2175 119 38 24 chr2 164382910 164383280 -86304574 + THE1C LTR MaLR 1 375 0 1778 178 51 18 chr2 164383280 164383433 -86304421 - MER7A DNA MER2_type -2886 152 6 427 215 154 23 chr2 164383507 164383637 -86304217 - L2 LINE L2 -6 3307 3161 191 304 141 11 chr2 164384510 164384602 -86303252 + L2 LINE L2 3193 3296 -17 292 296 156 34 chr2 164385260 164385439 -86302415 - MIR SINE MIR -50 212 12 24 0 0 0 chr2 164387012 164387036 -86300818 + AT_rich Low_complexity Low_complexity 1 24 0 3795 64 2 0 chr2 164389015 164389500 -86298354 - L1PA7 LINE L1 -3 6151 5666 2978 49 3 0 chr2 164389500 164389868 -86297986 + L1PA7 LINE L1 5312 5680 -474 228 299 13 13 chr2 164391966 164392043 -86295811 + MIR3 SINE MIR 91 167 -41 2254 59 31 7 chr2 164392149 164392436 -86295418 - AluY SINE Alu -1 310 17 373 257 79 0 chr2 164392726 164392827 -86295027 + MER94 DNA DNA 20 128 -6 216 0 0 0 chr2 164393090 164393114 -86294740 + (T)n Simple_repeat Simple_repeat 1 24 0 188 237 0 0 chr2 164393464 164393502 -86294352 - L2 LINE L2 -8 3305 3268 293 200 0 0 chr2 164395169 164395229 -86292625 - MER116 DNA Mariner -20 60 1 718 286 69 28 chr2 164395407 164395624 -86292230 + MIR SINE MIR 7 232 -30 2342 210 21 31 chr2 164395690 164396236 -86291618 + MER44D DNA MER2_type 1 605 0 2128 126 3 0 chr2 164396726 164397028 -86290826 - AluSp SINE Alu -5 308 6 667 322 21 21 chr2 164397040 164397273 -86290581 + MIR SINE MIR 30 262 0 21 0 0 0 chr2 164397915 164397936 -86289918 + AT_rich Low_complexity Low_complexity 1 21 0 241 259 0 35 chr2 164399544 164399602 -86288252 + 7SK RNA RNA 8 63 -130 2368 118 18 26 chr2 164400279 164400668 -86287186 - L1PA13 LINE L1 0 6163 5778 896 225 24 29 chr2 164401455 164401664 -86286190 - MER63A DNA MER1_type -2 208 1 211 371 28 21 chr2 164401853 164401996 -86285858 - L2 LINE L2 -2493 821 678 379 338 53 50 chr2 164402026 164402384 -86285470 - L2 LINE L2 -954 2360 2002 271 310 101 39 chr2 164403871 164404896 -86282958 + L1M4 LINE L1 4146 5233 -913 243 345 99 21 chr2 164404990 164405181 -86282673 - MIR SINE MIR -12 250 45 271 321 152 31 chr2 164455189 164455620 -86232234 + L2 LINE L2 429 917 -2397 1905 174 0 3 chr2 164455620 164455931 -86231923 - AluJb SINE Alu 0 312 3 271 321 152 31 chr2 164455931 164455947 -86231907 + L2 LINE L2 917 930 -2384 * 685 344 54 32 chr2 164455932 164456565 -86231289 + L2 LINE L2 2661 3312 -1 517 327 93 58 chr2 164456722 164457801 -86230053 + L1MEc LINE L1 184 1300 -4905 308 255 12 0 chr2 164457998 164458090 -86229764 + L1MEc LINE L1 1531 1667 -909 896 181 75 0 chr2 164458241 164458401 -86229453 + MER20 DNA MER1_type 36 207 -12 2288 84 0 3 chr2 164458430 164458738 -86229116 + AluSq SINE Alu 1 307 -6 2073 123 13 3 chr2 164458803 164459111 -86228743 + AluSq SINE Alu 1 311 -2 4555 135 32 30 chr2 164459523 164460340 -86227514 + L1PB4 LINE L1 5328 6149 -7 338 292 50 71 chr2 164460376 164460616 -86227238 + L1ME3A LINE L1 2351 2585 -3630 227 291 0 23 chr2 164460640 164460726 -86227128 + L1ME3A LINE L1 2532 2615 -3600 729 282 44 17 chr2 164460835 164461129 -86226725 + L1ME3A LINE L1 2769 3070 -3145 22 0 0 0 chr2 164461141 164461163 -86226691 + AT_rich Low_complexity Low_complexity 1 22 0 258 291 35 0 chr2 164461273 164461359 -86226495 - MIR SINE MIR -21 241 153 395 306 109 36 chr2 164461548 164461878 -86225976 + L1ME3A LINE L1 3439 3792 -2423 357 263 59 0 chr2 164461913 164462031 -86225823 + L1ME3A LINE L1 3811 3935 -2280 456 346 67 28 chr2 164462105 164462388 -86225466 + MLT1I LTR MaLR 94 387 -22 1084 301 110 36 chr2 164462392 164463673 -86224181 + L1ME3A LINE L1 3944 5319 -896 373 335 45 9 chr2 164463825 164464046 -86223808 + L1ME3A LINE L1 5455 5683 -548 458 293 46 24 chr2 164464050 164464297 -86223557 + L1ME3A LINE L1 5779 6028 -203 238 65 0 0 chr2 164464480 164464511 -86223343 - MER113 DNA MER1_type? -467 54 24 27 49 0 0 chr2 164465586 164465627 -86222227 + AT_rich Low_complexity Low_complexity 1 41 0 1577 244 109 8 chr2 164466055 164466593 -86221261 - L1ME3A LINE L1 -268 5902 5305 244 277 31 0 chr2 164466693 164466758 -86221096 + (TATG)n Simple_repeat Simple_repeat 1 67 0 269 281 8 41 chr2 164469158 164469279 -86218575 - L2 LINE L2 -44 3269 3153 * 356 319 124 0 chr2 164469274 164469443 -86218411 + MIR SINE MIR 10 199 -63 494 243 50 44 chr2 164469932 164470113 -86217741 + L1ME3A LINE L1 6047 6228 -11 243 267 33 22 chr2 164470807 164470897 -86216957 - L2 LINE L2 0 3313 3223 276 53 0 0 chr2 164471017 164471055 -86216799 + (GA)n Simple_repeat Simple_repeat 1 38 0 303 229 114 14 chr2 164471211 164471351 -86216503 + L1ME4a LINE L1 5968 6121 0 22 35 0 0 chr2 164471926 164471955 -86215899 + AT_rich Low_complexity Low_complexity 1 29 0 7051 50 6 0 chr2 164472379 164473966 -86213888 + L1PA7 LINE L1 4562 6150 -4 1412 251 57 26 chr2 164475890 164476313 -86211541 - MER63B DNA MER1_type 0 436 1 183 80 0 0 chr2 164477342 164477367 -86210487 + (T)n Simple_repeat Simple_repeat 1 25 0 282 298 144 43 chr2 164477488 164477696 -86210158 + MIR SINE MIR 34 262 0 1709 122 8 4 chr2 164477752 164478018 -86209836 - AluSq SINE Alu 0 313 47 881 181 4 97 chr2 164478919 164479156 -86208698 - MER20 DNA MER1_type -3 216 2 247 213 40 53 chr2 164479243 164479318 -86208536 - MIR SINE MIR -44 218 145 460 256 8 16 chr2 164479374 164479495 -86208359 - MIR SINE MIR -119 143 24 4267 223 59 28 chr2 164479623 164481420 -86206434 + L1MD1 LINE L1 4044 5925 -317 681 151 0 65 chr2 164481420 164481559 -86206295 + FLAM_C SINE Alu 1 130 -3 4267 223 59 28 chr2 164481559 164481888 -86205966 + L1MD1 LINE L1 5925 6242 0 180 289 39 19 chr2 164482236 164482288 -86205566 - L2 LINE L2 -11 3302 3250 25 0 0 0 chr2 164482309 164482334 -86205520 + AT_rich Low_complexity Low_complexity 1 25 0 200 79 53 0 chr2 164483310 164483348 -86204506 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 2315 88 7 3 chr2 164483520 164483827 -86204027 + AluSc SINE Alu 2 309 0 280 369 121 0 chr2 164484667 164484816 -86203038 - L3b LINE CR1 -308 1275 1109 2103 126 7 0 chr2 164485152 164485438 -86202416 - AluSc SINE Alu -21 288 1 257 236 18 0 chr2 164486451 164486506 -86201348 + MLT1E1 LTR MaLR 92 147 -507 * 2065 252 84 11 chr2 164486476 164487012 -86200842 + MLT1E2 LTR MaLR 52 626 0 2059 159 31 0 chr2 164487454 164487807 -86200047 + THE1B LTR MaLR 1 364 0 1967 151 125 10 chr2 164488087 164488471 -86199383 - MSTA LTR MaLR 0 428 1 304 224 17 0 chr2 164488649 164488707 -86199147 + MER58 DNA MER1_type 1 59 -2361 * 346 179 0 107 chr2 164488706 164488790 -86199064 + MER58 DNA MER1_type 2346 2420 0 210 71 0 0 chr2 164489681 164489709 -86198145 + (GA)n Simple_repeat Simple_repeat 2 29 0 506 294 56 109 chr2 164490486 164490843 -86197011 + L2 LINE L2 2935 3272 0 5789 99 27 0 chr2 164491211 164492058 -86195796 - L1PA14 LINE L1 -9 6152 5283 298 317 41 16 chr2 164492209 164492332 -86195522 + MIR SINE MIR 70 195 -67 1472 146 19 127 chr2 164492354 164492731 -86195123 - MER1B DNA MER1_type -1 336 1 5818 150 63 14 chr2 164493199 164495275 -86192579 + L1MA8 LINE L1 4099 6291 0 441 243 179 21 chr2 164495353 164495493 -86192361 + MIR SINE MIR 18 179 -83 2276 72 3 26 chr2 164495497 164495803 -86192051 + AluSc SINE Alu 1 299 -10 323 272 176 8 chr2 164496848 164496973 -86190881 - MER102b DNA MER1_type 0 341 196 3772 142 57 39 chr2 164497003 164497778 -86190076 - L1MC1 LINE L1 -3 6330 5542 340 216 10 0 chr2 164497796 164497893 -86189961 + L1M4 LINE L1 4978 5075 -1071 1018 240 0 28 chr2 164497902 164498156 -86189698 + MLT1A1 LTR MaLR 10 256 -109 4817 245 32 18 chr2 164498183 164499333 -86188521 - L1MC1 LINE L1 -1195 4951 3820 2180 119 0 3 chr2 164499333 164499635 -86188219 - AluSx SINE Alu -11 301 1 4817 245 32 18 chr2 164499635 164500633 -86187221 - L1MC1 LINE L1 -2326 3820 2614 22 35 0 0 chr2 164501010 164501039 -86186815 + AT_rich Low_complexity Low_complexity 1 29 0 32 26 0 0 chr2 164501871 164501910 -86185944 + AT_rich Low_complexity Low_complexity 1 39 0 2282 100 0 3 chr2 164501974 164502283 -86185571 + AluSg SINE Alu 1 308 -2 376 270 12 68 chr2 164502711 164502874 -86184980 + L2 LINE L2 3160 3313 0 262 313 128 24 chr2 164502887 164503098 -86184756 + MIR SINE MIR 6 238 -24 193 238 0 0 chr2 164503193 164503235 -86184619 + L2 LINE L2 3223 3264 -8 367 345 58 22 chr2 164504436 164504575 -86183279 - MIR SINE MIR -117 145 2 21 57 0 0 chr2 164505990 164506025 -86181829 + AT_rich Low_complexity Low_complexity 1 35 0 279 350 42 63 chr2 164506189 164506520 -86181334 + L2 LINE L2 71 394 -2920 39 50 0 0 chr2 164506681 164506741 -86181113 + AT_rich Low_complexity Low_complexity 1 60 0 3937 88 9 16 chr2 164506881 164507451 -86180403 + L1PA13 LINE L1 5594 6159 -4 1398 126 0 27 chr2 164509179 164509401 -86178453 - AluSc SINE Alu -15 294 79 216 186 23 0 chr2 164509472 164509515 -86178339 + (CA)n Simple_repeat Simple_repeat 2 45 0 282 132 0 0 chr2 164511508 164511561 -86176293 + (TG)n Simple_repeat Simple_repeat 1 53 0 1965 98 3 79 chr2 164511803 164512120 -86175734 - AluSg SINE Alu -17 293 1 1828 238 80 71 chr2 164513600 164514486 -86173368 + L1MC5 LINE L1 6633 7526 -435 23 54 0 0 chr2 164514782 164514819 -86173035 + AT_rich Low_complexity Low_complexity 1 37 0 340 246 23 0 chr2 164515742 164515853 -86172001 + MIR SINE MIR 101 214 -48 826 138 57 16 chr2 164515966 164515997 -86171857 - L1MA7 LINE L1 -202 5952 5924 1771 121 32 13 chr2 164515997 164516311 -86171543 - L1MA8 LINE L1 -2 6289 5970 826 138 57 16 chr2 164516311 164516451 -86171403 - L1MA7 LINE L1 -230 5924 5781 301 132 0 0 chr2 164516569 164516622 -86171232 - L1PA7 LINE L1 -1 6153 6101 186 103 0 0 chr2 164518397 164518426 -86169428 + (TA)n Simple_repeat Simple_repeat 1 29 0 2166 130 0 0 chr2 164518780 164519081 -86168773 + AluSg SINE Alu 1 301 -9 203 354 14 49 chr2 164519762 164519906 -86167948 + L2 LINE L2 2926 3064 -208 310 346 7 46 chr2 164520245 164520398 -86167456 - MIR SINE MIR -67 195 49 513 272 98 11 chr2 164523421 164523605 -86164249 - MIR SINE MIR -18 244 45 23 33 0 0 chr2 164524497 164524527 -86163327 + AT_rich Low_complexity Low_complexity 1 30 0 951 294 87 22 chr2 164524815 164525264 -86162590 + L2 LINE L2 2831 3308 -5 365 259 0 12 chr2 164526157 164526242 -86161612 + MIR SINE MIR 114 197 -65 508 316 53 24 chr2 164527788 164527994 -86159860 - Charlie8 DNA MER1_type -2199 218 7 955 114 0 54 chr2 164530067 164530216 -86157638 - AluSq SINE Alu -103 210 70 29 0 0 0 chr2 164530686 164530715 -86157139 + AT_rich Low_complexity Low_complexity 1 29 0 2205 122 3 0 chr2 164530788 164531100 -86156754 - AluSq SINE Alu 0 313 1 1578 202 43 6 chr2 164531654 164531981 -86155873 - MER58B DNA MER1_type -2 339 1 1940 156 122 8 chr2 164532138 164532522 -86155332 - MSTA LTR MaLR 0 428 1 362 299 29 17 chr2 164532527 164532701 -86155153 + MLT1H LTR MaLR 1 176 -373 795 152 20 0 chr2 164532723 164532874 -86154980 + L1MD1 LINE L1 6089 6242 0 271 276 11 0 chr2 164532908 164532995 -86154859 - L1M4 LINE L1 -1542 4604 4517 288 0 0 0 chr2 164532999 164533031 -86154823 + (TG)n Simple_repeat Simple_repeat 1 32 0 26 30 0 0 chr2 164533068 164533101 -86154753 + AT_rich Low_complexity Low_complexity 1 33 0 427 348 124 0 chr2 164534292 164534470 -86153384 - MIR SINE MIR -50 212 13 390 297 249 0 chr2 164534501 164534794 -86153060 + L2 LINE L2 2841 3206 -107 186 43 0 0 chr2 164534823 164534846 -86153008 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 583 274 62 48 chr2 164535611 164535984 -86151870 - MARNA DNA Mariner -40 546 169 21 36 0 0 chr2 164536926 164536954 -86150900 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 164537131 164537154 -86150700 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 216 0 0 0 chr2 164537663 164537687 -86150167 + (A)n Simple_repeat Simple_repeat 1 24 0 * 249 108 0 0 chr2 164537686 164537723 -86150131 + (GA)n Simple_repeat Simple_repeat 2 38 0 3324 223 40 26 chr2 164537807 164538722 -86149132 + MER63C DNA MER1_type 2 929 -1 2141 230 53 65 chr2 164539814 164540729 -86147125 - L1M4c LINE L1 -4516 1787 798 524 177 143 8 chr2 164540730 164540856 -86146998 + L1MB1 LINE L1 5719 5860 -308 1486 164 43 66 chr2 164541563 164541754 -86146100 - MER44D DNA MER2_type -1882 609 415 2601 13 0 7 chr2 164541754 164542052 -86145802 + AluYa5 SINE Alu 1 296 -15 1486 164 43 66 chr2 164542052 164542207 -86145647 - MER44D DNA MER2_type -2076 415 1 186 43 0 0 chr2 164543000 164543023 -86144831 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 553 265 29 25 chr2 164543107 164543311 -86144543 - L1MC5 LINE L1 -48 7913 7709 315 147 147 69 chr2 164543643 164543745 -86144109 - L1MC5 LINE L1 -905 7056 6947 1896 144 0 0 chr2 164543922 164544207 -86143647 - AluSx SINE Alu -27 285 1 718 258 54 74 chr2 164544209 164544586 -86143268 - L1MC5 LINE L1 -884 6924 6542 959 245 120 45 chr2 164544839 164545304 -86142550 - L1ME1 LINE L1 -6 6160 5661 1588 229 86 37 chr2 164545459 164545984 -86141870 - L1ME LINE L1 -468 5698 5113 2178 89 4 0 chr2 164545984 164546285 -86141569 + AluSp SINE Alu 1 302 0 1588 229 86 37 chr2 164546285 164546643 -86141211 - L1ME LINE L1 -1053 5113 4774 1435 46 0 0 chr2 164546651 164546825 -86141029 - AluY SINE Alu -9 302 129 461 225 0 63 chr2 164546839 164546981 -86140873 - L1ME LINE L1 -1388 4758 4626 * 668 245 108 83 chr2 164546976 164547412 -86140442 - L1ME LINE L1 -1819 4327 3881 491 291 97 10 chr2 164547622 164547828 -86140026 + L1ME3 LINE L1 1033 1256 -4863 251 342 8 0 chr2 164548196 164548316 -86139538 + L1ME3 LINE L1 3609 3729 -2400 422 271 119 61 chr2 164548397 164548707 -86139147 + L1ME3 LINE L1 4928 5255 -874 228 136 85 0 chr2 164548708 164548767 -86139087 + (TA)n Simple_repeat Simple_repeat 2 65 0 341 283 62 0 chr2 164548884 164549041 -86138813 + L1ME3 LINE L1 5699 5868 -285 22 0 0 0 chr2 164549063 164549085 -86138769 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 164549136 164549166 -86138688 + AT_rich Low_complexity Low_complexity 1 30 0 342 268 21 78 chr2 164550066 164550208 -86137646 + MIR SINE MIR 56 189 -73 414 293 21 0 chr2 164550388 164550528 -86137326 + Charlie8 DNA MER1_type 38 180 -2237 855 311 82 16 chr2 164550802 164551169 -86136685 + MLT1I LTR MaLR 19 409 0 341 293 109 7 chr2 164551379 164551526 -86136328 - MIR SINE MIR -6 256 95 412 277 70 67 chr2 164552616 164552893 -86134961 + LTR8 LTR ERV1 1 283 -444 1005 252 100 55 chr2 164552894 164553363 -86134491 + LTR8A LTR ERV1 113 727 0 2112 120 3 13 chr2 164555271 164555580 -86132274 + AluSx SINE Alu 1 306 -6 198 224 0 0 chr2 164555701 164555750 -86132104 + (TATG)n Simple_repeat Simple_repeat 4 52 0 240 228 5 60 chr2 164558663 164558847 -86129007 + (TAA)n Simple_repeat Simple_repeat 3 176 0 204 240 0 0 chr2 164558920 164558970 -86128884 + (TTATA)n Simple_repeat Simple_repeat 5 54 0 21 36 0 0 chr2 164559745 164559773 -86128081 + AT_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr2 164560771 164560802 -86127052 + AT_rich Low_complexity Low_complexity 1 31 0 30 27 0 0 chr2 164561346 164561383 -86126471 + AT_rich Low_complexity Low_complexity 1 37 0 2516 49 0 3 chr2 164562057 164562361 -86125493 - AluY SINE Alu -8 303 1 793 156 25 0 chr2 164566330 164566490 -86121364 + CT-rich Low_complexity Low_complexity 3 166 0 216 240 39 10 chr2 164566602 164566706 -86121148 + CT-rich Low_complexity Low_complexity 3 109 0 532 283 85 94 chr2 164566824 164567153 -86120701 - L2 LINE L2 0 3313 2988 23 0 0 0 chr2 164567826 164567849 -86120005 + AT_rich Low_complexity Low_complexity 1 23 0 31 26 0 0 chr2 164569188 164569226 -86118628 + AT_rich Low_complexity Low_complexity 1 38 0 694 228 88 49 chr2 164569777 164570106 -86117748 + Charlie4a DNA MER1_type 166 507 -1 2092 109 0 7 chr2 164570106 164570392 -86117462 + AluSx SINE Alu 2 413 0 889 62 0 0 chr2 164570392 164570520 -86117334 + (GAAAA)n Simple_repeat Simple_repeat 2 170 0 27 0 0 0 chr2 164570843 164570870 -86116984 + AT_rich Low_complexity Low_complexity 1 27 0 33 73 0 0 chr2 164571434 164571502 -86116352 + AT_rich Low_complexity Low_complexity 1 68 0 1936 132 3 14 chr2 164572675 164572986 -86114868 + AluSp SINE Alu 1 308 0 197 286 48 0 chr2 164573821 164573884 -86113970 + L2 LINE L2 3238 3303 -10 1627 190 20 7 chr2 164573957 164574252 -86113602 - AluJo SINE Alu -13 299 1 185 342 40 0 chr2 164575564 164575640 -86112214 + L2 LINE L2 3230 3308 -5 302 261 0 22 chr2 164575932 164576024 -86111830 - L1MC4 LINE L1 -1339 6703 6614 * 312 289 0 48 chr2 164575996 164576100 -86111754 - L1MC4 LINE L1 -1330 6712 6614 217 245 10 10 chr2 164577129 164577227 -86110627 + GA-rich Low_complexity Low_complexity 2 99 0 27 29 0 0 chr2 164577820 164577854 -86110000 + AT_rich Low_complexity Low_complexity 1 34 0 256 284 256 6 chr2 164579014 164579190 -86108664 - MIR SINE MIR -9 253 34 270 176 0 0 chr2 164579751 164579802 -86108052 + (TA)n Simple_repeat Simple_repeat 2 52 0 396 0 0 0 chr2 164581217 164581261 -86106593 + (TG)n Simple_repeat Simple_repeat 2 45 0 181 277 85 0 chr2 164581304 164581351 -86106503 - L2 LINE L2 -18 3254 3204 21 0 0 0 chr2 164582472 164582493 -86105361 + AT_rich Low_complexity Low_complexity 1 21 0 1307 187 25 25 chr2 164583240 164583523 -86104331 - AluJo SINE Alu -7 305 23 197 33 33 0 chr2 164583658 164583688 -86104166 + (TG)n Simple_repeat Simple_repeat 2 32 0 405 39 0 0 chr2 164584353 164584404 -86103450 + (CA)n Simple_repeat Simple_repeat 2 52 0 762 266 46 126 chr2 164584410 164584956 -86102898 - L1MC4 LINE L1 -1875 5933 5432 234 194 46 9 chr2 164587124 164587232 -86100622 + (TA)n Simple_repeat Simple_repeat 1 112 0 24 0 0 0 chr2 164587744 164587768 -86100086 + AT_rich Low_complexity Low_complexity 1 24 0 284 127 18 0 chr2 164587791 164587846 -86100008 + (TA)n Simple_repeat Simple_repeat 2 57 0 223 345 71 0 chr2 164587928 164588041 -86099813 + MIR SINE MIR 32 152 -110 268 337 139 39 chr2 164588173 164588612 -86099242 + L2 LINE L2 2158 2640 -674 670 310 23 0 chr2 164589460 164589676 -86098178 + MLT1L LTR MaLR 387 607 -8 2031 129 7 10 chr2 164590694 164590997 -86096857 + AluSx SINE Alu 1 302 -10 191 70 0 93 chr2 164591108 164591151 -86096703 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 29 0 0 0 chr2 164591667 164591696 -86096158 + AT_rich Low_complexity Low_complexity 1 29 0 239 311 106 0 chr2 164592179 164592311 -86095543 - L1ME4a LINE L1 -30 6091 5946 302 274 219 30 chr2 164592500 164592737 -86095117 - L1ME4a LINE L1 -443 5678 5397 523 310 188 0 chr2 164593330 164593543 -86094311 + MIR SINE MIR 8 260 -2 239 314 29 29 chr2 164593615 164593685 -86094169 - L2 LINE L2 -2 3311 3242 190 173 19 19 chr2 164594001 164594053 -86093801 + GA-rich Low_complexity Low_complexity 2 53 0 1880 170 24 3 chr2 164594656 164594985 -86092869 + MER2 DNA MER2_type 10 345 0 558 250 51 83 chr2 164595038 164595254 -86092600 - MIR SINE MIR -7 255 47 325 348 0 8 chr2 164595773 164595891 -86091963 + L2 LINE L2 3196 3312 -1 311 296 104 32 chr2 164595975 164596100 -86091754 + L2 LINE L2 3137 3270 -2 2236 102 0 3 chr2 164596668 164596987 -86090867 - AluSc SINE Alu 0 309 1 507 264 24 55 chr2 164597688 164597942 -86089912 - L1MC4a LINE L1 -1878 5930 5685 288 286 31 0 chr2 164598516 164598614 -86089240 - MIR3 SINE MIR -5 203 103 371 390 14 9 chr2 164598656 164598866 -86088988 - MIR SINE MIR -2 260 50 1286 278 50 20 chr2 164599652 164600163 -86087691 - L2 LINE L2 -67 3246 2725 1212 274 68 27 chr2 164600323 164600841 -86087013 + MLT2E LTR ERVL 27 624 -4 24 0 0 0 chr2 164601568 164601592 -86086262 + AT_rich Low_complexity Low_complexity 1 24 0 229 372 115 6 chr2 164602096 164602252 -86085602 + MIR SINE MIR 29 201 -61 2091 129 0 7 chr2 164603451 164603754 -86084100 + AluSg SINE Alu 1 301 -9 586 327 58 4 chr2 164603766 164603992 -86083862 - MIR SINE MIR -6 256 19 1238 219 34 0 chr2 164604276 164604541 -86083313 + L1M3e LINE L1 3 276 -6754 2257 275 61 51 chr2 164604551 164605671 -86082183 + L1M3e LINE L1 921 2051 -4979 271 211 19 0 chr2 164605671 164605723 -86082131 + Tigger5 DNA MER2_type 1 53 -2270 353 157 229 0 chr2 164605732 164605802 -86082052 + Tigger5 DNA MER2_type 2238 2323 0 2192 260 45 45 chr2 164605803 164606737 -86081117 + L1M4c LINE L1 928 1861 -4523 7646 209 37 11 chr2 164606827 164608687 -86079167 + L1M4c LINE L1 2700 4607 -1775 * 9910 159 15 14 chr2 164608684 164610253 -86077601 - L1P LINE L1 -1413 4733 3159 414 0 0 0 chr2 164610253 164610299 -86077555 + (TG)n Simple_repeat Simple_repeat 2 47 0 9910 159 15 14 chr2 164610299 164610572 -86077282 - L1P LINE L1 -2987 3159 2888 2836 85 0 0 chr2 164610572 164610956 -86076898 + L1PA13 LINE L1 5775 6161 -2 889 168 159 4 chr2 164610957 164611189 -86076665 + L1M4c LINE L1 4602 4869 -1513 725 173 0 0 chr2 164611161 164611294 -86076560 + L1MA9 LINE L1 6172 6304 -244 * 1301 152 45 0 chr2 164611343 164611586 -86076268 + L1MA9 LINE L1 6295 6548 0 314 96 0 19 chr2 164611705 164611757 -86076097 + (GGAA)n Simple_repeat Simple_repeat 3 53 0 593 315 33 9 chr2 164613620 164613833 -86074021 + MIR SINE MIR 20 237 -25 21 0 0 0 chr2 164616607 164616628 -86071226 + AT_rich Low_complexity Low_complexity 1 21 0 276 30 0 0 chr2 164617432 164617465 -86070389 + (CA)n Simple_repeat Simple_repeat 2 34 0 839 224 28 6 chr2 164619488 164619667 -86068187 - MER5A DNA MER1_type -1 188 6 920 222 49 8 chr2 164620038 164620304 -86067550 - Charlie5 DNA MER1_type 0 2624 2348 345 191 61 61 chr2 164620325 164620472 -86067382 - Charlie5 DNA MER1_type -2441 171 25 21 0 0 0 chr2 164620692 164620713 -86067141 + AT_rich Low_complexity Low_complexity 1 21 0 344 192 51 0 chr2 164620939 164621017 -86066837 - MIR SINE MIR -110 152 71 5980 158 18 13 chr2 164621644 164623727 -86064127 + L1PB3 LINE L1 4055 6147 -7 29 28 0 0 chr2 164623727 164623763 -86064091 + AT_rich Low_complexity Low_complexity 1 36 0 207 0 0 0 chr2 164624290 164624313 -86063541 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 1834 130 0 81 chr2 164624619 164624941 -86062913 + AluSx SINE Alu 1 296 -16 2325 63 0 3 chr2 164625164 164625472 -86062382 - AluSg SINE Alu 0 307 1 373 172 0 0 chr2 164625538 164625596 -86062258 + MER2 DNA MER2_type 37 94 -251 27 73 0 0 chr2 164626135 164626190 -86061664 + AT_rich Low_complexity Low_complexity 1 55 0 2739 23 0 0 chr2 164627318 164627626 -86060228 - AluY SINE Alu -3 308 1 21 36 0 0 chr2 164628089 164628117 -86059737 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 164628627 164628656 -86059198 + AT_rich Low_complexity Low_complexity 1 29 0 2323 88 7 0 chr2 164633388 164633694 -86054160 + AluSp SINE Alu 1 308 -5 2772 235 76 18 chr2 164634493 164635313 -86052541 - L1ME2 LINE L1 -19 6145 5279 200 250 18 0 chr2 164635313 164635369 -86052485 + (TA)n Simple_repeat Simple_repeat 1 57 0 1649 247 141 11 chr2 164635475 164636221 -86051633 - L1ME2 LINE L1 -946 5200 4358 1745 228 45 67 chr2 164636257 164636964 -86050890 + L1MC4 LINE L1 7363 8042 0 2242 74 27 3 chr2 164637444 164637620 -86050234 - AluY SINE Alu -6 305 118 351 0 0 0 chr2 164637620 164637659 -86050195 + (TG)n Simple_repeat Simple_repeat 2 40 0 2242 74 27 3 chr2 164637659 164637780 -86050074 - AluY SINE Alu -193 118 1 197 0 71 0 chr2 164638020 164638048 -86049806 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 455 286 8 8 chr2 164638991 164639124 -86048730 - MER94 DNA DNA -1 133 1 21 0 0 0 chr2 164639689 164639710 -86048144 + AT_rich Low_complexity Low_complexity 1 21 0 546 291 94 30 chr2 164639712 164639946 -86047908 - MIR SINE MIR -11 251 3 230 197 155 28 chr2 164640059 164640130 -86047724 - L2 LINE L2 0 3313 3234 375 314 127 30 chr2 164640476 164640712 -86047142 + MIR SINE MIR 4 262 0 23 33 0 0 chr2 164641211 164641241 -86046613 + AT_rich Low_complexity Low_complexity 1 30 0 327 279 110 64 chr2 164642915 164643396 -86044458 + L1ME4a LINE L1 5574 6076 -45 282 250 54 11 chr2 164644814 164644906 -86042948 + MER94 DNA DNA 10 105 -29 287 253 147 21 chr2 164645179 164645274 -86042580 + MIR SINE MIR 80 186 -76 243 277 123 67 chr2 164647783 164647978 -86039876 - MIR SINE MIR -5 257 52 1511 197 22 48 chr2 164648002 164648373 -86039481 + MLT1A1 LTR MaLR 5 365 0 397 379 40 0 chr2 164648511 164648685 -86039169 + MIR SINE MIR 63 243 -19 212 352 0 19 chr2 164648821 164648926 -86038928 - L2 LINE L2 -769 2545 2443 22 0 0 0 chr2 164649969 164649991 -86037863 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 164651733 164651763 -86036091 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 164654936 164654960 -86032894 + AT_rich Low_complexity Low_complexity 1 24 0 204 258 0 0 chr2 164656026 164656123 -86031731 + G-rich Low_complexity Low_complexity 2 98 0 2454 54 0 0 chr2 164659011 164659306 -86028548 - AluY SINE Alu -14 297 3 1134 229 44 55 chr2 164659317 164659610 -86028244 - AluJb SINE Alu -12 290 1 223 211 18 0 chr2 164660938 164660995 -86026859 + (TA)n Simple_repeat Simple_repeat 2 59 0 3578 277 96 37 chr2 164661216 164663611 -86024243 + L1ME1 LINE L1 46 2542 -3673 1860 196 10 24 chr2 164663611 164663954 -86023900 + L1MB7 LINE L1 5759 6096 -88 1705 180 41 18 chr2 164663954 164664293 -86023561 + MER7A DNA MER2_type 1 345 -1 1860 196 10 24 chr2 164664293 164664367 -86023487 + L1MB7 LINE L1 6096 6170 -14 3578 277 96 37 chr2 164664367 164664479 -86023375 + L1ME1 LINE L1 2542 2646 -3569 1185 154 22 22 chr2 164664480 164664707 -86023147 - THE1C LTR MaLR 0 375 149 5207 134 110 1 chr2 164664734 164665615 -86022239 - THE1C-int LTR MaLR -603 977 1 1510 163 89 50 chr2 164665615 164665976 -86021878 - THE1C LTR MaLR 0 375 1 593 246 107 0 chr2 164665982 164666254 -86021600 + L1ME1 LINE L1 2649 2949 -3266 1350 216 47 50 chr2 164666283 164666644 -86021210 + MLT1A1 LTR MaLR 6 365 0 1006 245 57 53 chr2 164666649 164666967 -86020887 + MLT2C1 LTR ERVL 14 332 -65 4001 252 90 55 chr2 164667031 164669409 -86018445 + L1ME1 LINE L1 2970 5430 -785 791 160 28 104 chr2 164669405 164669617 -86018237 + L1MA9 LINE L1 6116 6311 -1 * 1967 246 91 48 chr2 164669622 164670312 -86017542 + L1ME1 LINE L1 5420 6139 -96 547 252 31 0 chr2 164671250 164671377 -86016477 - MIR SINE MIR -68 194 64 242 257 0 0 chr2 164671776 164671846 -86016008 - L1MB7 LINE L1 -1 6183 6114 4199 68 10 0 chr2 164671871 164672719 -86015135 - L1P2 LINE L1 -496 5658 4806 3245 60 25 2 chr2 164672719 164673146 -86014708 + L1PA6 LINE L1 5710 6152 -2 473 209 43 17 chr2 164673151 164673266 -86014588 - L1MD2 LINE L1 -19 6340 6223 1760 242 149 6 chr2 164673309 164673785 -86014069 - MER77 LTR ERV1 0 605 62 226 289 72 36 chr2 164674216 164674299 -86013555 + L2 LINE L2 3186 3271 -1 237 279 17 31 chr2 164674331 164674685 -86013169 + GA-rich Low_complexity Low_complexity 1 349 0 192 240 140 0 chr2 164675317 164675367 -86012487 - MIR SINE MIR -67 141 85 1440 108 70 0 chr2 164676259 164676473 -86011381 - MER30 DNA MER1_type -1 229 1 271 291 30 55 chr2 164676913 164677156 -86010698 - MLT1L LTR MaLR -199 416 203 29 60 0 0 chr2 164677760 164677810 -86010044 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 164677992 164678014 -86009840 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr2 164678186 164678215 -86009639 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr2 164679968 164680006 -86007848 + AT_rich Low_complexity Low_complexity 1 38 0 328 252 25 84 chr2 164680135 164680254 -86007600 + L2 LINE L2 3197 3308 -5 554 278 124 6 chr2 164680391 164680560 -86007294 + LTR33 LTR ERVL 15 203 -318 1834 154 47 16 chr2 164680632 164680996 -86006858 - THE1C LTR MaLR 0 375 1 10336 104 36 19 chr2 164680996 164682549 -86005305 - THE1C-int LTR MaLR 0 1580 1 2227 128 50 8 chr2 164682549 164682909 -86004945 - THE1C LTR MaLR 0 375 1 1682 161 3 59 chr2 164682971 164683337 -86004517 - MER4A LTR ERV1 0 664 261 800 334 47 18 chr2 164683419 164683760 -86004094 - ERVL LTR ERVL -2255 3509 3159 1112 324 56 17 chr2 164683762 164684243 -86003611 - ERVL LTR ERVL -2193 2803 2304 19864 178 27 15 chr2 164684243 164687192 -86000662 + L1MA2 LINE L1 16 2929 -4636 2297 105 14 6 chr2 164687192 164687544 -86000310 - THE1A LTR MaLR 0 355 1 19864 178 27 15 chr2 164687544 164691209 -85996645 + L1MA2 LINE L1 2929 6705 -860 23 68 0 0 chr2 164691216 164691260 -85996594 + AT_rich Low_complexity Low_complexity 1 44 0 6959 98 14 3 chr2 164691262 164692271 -85995583 + L1MA2 LINE L1 6704 7723 0 25 51 0 0 chr2 164692272 164692311 -85995543 + AT_rich Low_complexity Low_complexity 1 39 0 406 317 37 63 chr2 164692311 164692582 -85995272 - ERVL LTR ERVL -3413 2351 2088 511 176 0 78 chr2 164692586 164692660 -85995194 - MER2 DNA MER2_type 0 345 280 417 253 35 2 chr2 164692660 164692768 -85995086 + FRAM/FAM SINE Alu 1 73 -93 1660 137 3 46 chr2 164692768 164693053 -85994801 - MER2 DNA MER2_type -72 273 1 1128 303 28 14 chr2 164693054 164693414 -85994440 - ERVL LTR ERVL -2958 2038 1674 843 303 4 0 chr2 164693519 164693783 -85994071 + L1ME3A LINE L1 5676 5940 -230 25 0 0 0 chr2 164693790 164693815 -85994039 + AT_rich Low_complexity Low_complexity 1 25 0 233 234 88 98 chr2 164693906 164694111 -85993743 + L1ME3A LINE L1 5968 6170 0 1815 171 11 38 chr2 164694323 164694692 -85993162 - MER47A DNA MER2_type -4 362 4 6400 99 20 0 chr2 164694997 164696667 -85991187 + L1PA7 LINE L1 4466 6152 -2 574 310 12 12 chr2 164697245 164697416 -85990438 + MER5B DNA MER1_type 1 171 -7 777 325 114 14 chr2 164697864 164698301 -85989553 - MLT1J LTR MaLR -30 481 1 788 234 35 0 chr2 164698491 164698662 -85989192 + MER20 DNA MER1_type 21 197 -22 365 287 37 30 chr2 164698980 164699043 -85988811 - Charlie8 DNA MER1_type -81 249 188 1541 223 25 68 chr2 164699043 164699531 -85988323 - MLT1C LTR MaLR 0 467 1 365 287 37 30 chr2 164699531 164699631 -85988223 - Charlie8 DNA MER1_type -142 188 85 336 260 55 0 chr2 164700231 164700304 -85987550 - MLT1K LTR MaLR -440 148 72 264 59 0 0 chr2 164700323 164700357 -85987497 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 210 236 0 0 chr2 164700386 164700441 -85987413 + CT-rich Low_complexity Low_complexity 2 56 0 237 311 25 41 chr2 164700643 164700765 -85987089 - L2 LINE L2 -218 3054 2935 201 239 45 91 chr2 164703439 164703527 -85984327 - L2 LINE L2 0 3313 3230 558 206 71 29 chr2 164704011 164704181 -85983673 + MIR SINE MIR 85 261 -1 353 307 34 45 chr2 164704189 164704365 -85983489 - MER5B DNA MER1_type -2 176 3 231 167 0 0 chr2 164705625 164705667 -85982187 + (CA)n Simple_repeat Simple_repeat 2 43 0 261 323 71 0 chr2 164706122 164706249 -85981605 - MIR SINE MIR 0 262 127 21 0 0 0 chr2 164707088 164707109 -85980745 + AT_rich Low_complexity Low_complexity 1 21 0 267 246 62 0 chr2 164707941 164708006 -85979848 + MER94 DNA DNA 4 72 -62 203 200 0 33 chr2 164708191 164708251 -85979603 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 581 154 43 0 chr2 164708684 164708846 -85979008 + (TA)n Simple_repeat Simple_repeat 2 170 0 2292 79 7 0 chr2 164708922 164709214 -85978640 - AluSc SINE Alu -15 294 1 234 0 0 0 chr2 164709566 164709592 -85978262 + (TG)n Simple_repeat Simple_repeat 2 27 0 1991 129 0 3 chr2 164709627 164709921 -85977933 - AluSq SINE Alu -18 295 3 21 0 0 0 chr2 164709963 164709984 -85977870 + AT_rich Low_complexity Low_complexity 1 21 0 1996 104 0 0 chr2 164710139 164710399 -85977455 - AluSc SINE Alu -49 260 1 1182 277 36 53 chr2 164710696 164711548 -85976306 - L1M4b LINE L1 -3542 3415 2610 24 63 0 16 chr2 164711548 164711588 -85976266 + AT_rich Low_complexity Low_complexity 1 41 -21 1452 123 22 43 chr2 164711588 164711864 -85975990 - L1MA5A LINE L1 -4 6293 6024 24 63 0 16 chr2 164711864 164711886 -85975968 + AT_rich Low_complexity Low_complexity 41 62 0 21 36 0 0 chr2 164712131 164712159 -85975695 + AT_rich Low_complexity Low_complexity 1 28 0 1599 207 46 23 chr2 164712165 164712775 -85975079 - L1M4b LINE L1 -5679 1180 6 5963 134 4 6 chr2 164712811 164713763 -85974091 - L1MA3 LINE L1 -5 6300 5351 465 297 76 92 chr2 164713744 164714919 -85972935 - L1MEc LINE L1 -5206 1190 35 * 28 29 0 0 chr2 164715001 164715036 -85972818 + AT_rich Low_complexity Low_complexity 1 35 0 222 271 21 42 chr2 164715081 164715177 -85972677 + MIR SINE MIR 55 148 -114 459 280 161 0 chr2 164715371 164715557 -85972297 + MIR SINE MIR 47 262 0 6733 161 18 3 chr2 164716138 164716489 -85971365 - L1PB1 LINE L1 0 6151 5806 240 111 0 0 chr2 164716489 164716525 -85971329 + (TA)n Simple_repeat Simple_repeat 2 37 0 6733 161 18 3 chr2 164716525 164718357 -85969497 - L1PB1 LINE L1 -345 5806 3941 1353 207 0 0 chr2 164718354 164718624 -85969230 + L1PB1 LINE L1 3641 3910 -2236 * 1075 229 118 102 chr2 164718628 164719244 -85968610 - MLT1E2 LTR MaLR 0 626 1 544 263 50 57 chr2 164719280 164719542 -85968312 + L2 LINE L2 3054 3313 0 1647 172 45 56 chr2 164720120 164720438 -85967416 + MLT1A2 LTR MaLR 1 316 -58 1796 162 40 9 chr2 164720438 164720765 -85967089 + MER1B DNA MER1_type 1 337 0 1647 172 45 56 chr2 164720765 164720824 -85967030 + MLT1A2 LTR MaLR 316 374 0 302 342 19 51 chr2 164720853 164721011 -85966843 - MIR3 SINE MIR -54 154 2 1595 223 71 11 chr2 164722047 164722482 -85965372 + MLT1C LTR MaLR 4 464 -3 186 167 38 27 chr2 164726873 164726921 -85960933 - L3b LINE CR1 -10 1573 1518 250 413 45 10 chr2 164727259 164727547 -85960307 + L2 LINE L2 2559 2856 -458 510 341 11 6 chr2 164727787 164727966 -85959888 - MER5A DNA MER1_type -7 182 3 1041 316 50 45 chr2 164728562 164728931 -85958923 + LTR16A LTR ERVL 16 389 -61 1257 153 146 55 chr2 164728931 164729205 -85958649 + AluSg SINE Alu 1 299 -11 1041 316 50 45 chr2 164729205 164729253 -85958601 + LTR16A LTR ERVL 389 435 -15 3479 298 59 40 chr2 164729270 164730805 -85957049 + HERV16 LTR ERVL 13 1576 -3420 3377 304 60 25 chr2 164730871 164732095 -85955759 + HERV16 LTR ERVL 1712 2978 -2018 1632 149 174 0 chr2 164732165 164732481 -85955373 + MER83C LTR ERV1 3 373 0 3662 222 91 30 chr2 164732484 164733534 -85954320 + MER83C-int LTR ERV1 15 2204 -3845 2224 154 0 23 chr2 164733778 164734128 -85953726 + MER83B-int LTR ERV1 4525 4866 -14 1563 162 200 0 chr2 164734142 164734457 -85953397 + MER83B LTR ERV1 1 378 0 1278 328 36 2 chr2 164734824 164735236 -85952618 + LTR16A LTR ERVL 11 436 -14 24 0 0 0 chr2 164735473 164735497 -85952357 + AT_rich Low_complexity Low_complexity 1 24 0 212 236 73 0 chr2 164735982 164736037 -85951817 + MER91C DNA MER1_type 18 76 -64 471 322 99 78 chr2 164736531 164737056 -85950798 + HAL1 LINE L1 818 1353 -1154 228 292 42 0 chr2 164737144 164737216 -85950638 + HAL1b LINE L1 392 466 -882 190 256 11 11 chr2 164737318 164737408 -85950446 + (CATATA)n Simple_repeat Simple_repeat 6 95 0 544 220 0 0 chr2 164737409 164737509 -85950345 - MER20 DNA MER1_type -1 218 119 222 220 0 0 chr2 164737561 164737620 -85950234 + (TA)n Simple_repeat Simple_repeat 2 60 0 260 316 0 0 chr2 164737634 164737732 -85950122 + (TA)n Simple_repeat Simple_repeat 1 98 0 2177 169 33 24 chr2 164737761 164738187 -85949667 - Tigger2a DNA MER2_type -1 433 4 213 39 0 0 chr2 164738232 164738258 -85949596 + (TGGA)n Simple_repeat Simple_repeat 4 29 0 2366 203 83 14 chr2 164738258 164738811 -85949043 + MER90 LTR ERV1 3 593 -21 331 323 0 67 chr2 164739098 164739262 -85948592 + HAL1b LINE L1 759 911 -437 235 172 58 23 chr2 164739752 164739839 -85948015 + (TA)n Simple_repeat Simple_repeat 2 91 0 345 311 64 60 chr2 164740102 164740369 -85947485 - L2 LINE L2 -941 2373 2106 2527 197 85 16 chr2 164740471 164741035 -85946819 - MLT2F LTR ERVL -58 605 3 183 179 107 89 chr2 164741258 164741314 -85946540 + L2 LINE L2 3257 3313 0 317 277 207 27 chr2 164741406 164741594 -85946260 + MIR SINE MIR 31 252 -10 225 0 0 0 chr2 164741776 164741801 -85946053 + (CA)n Simple_repeat Simple_repeat 1 25 0 192 125 0 0 chr2 164743175 164743207 -85944647 + (GA)n Simple_repeat Simple_repeat 1 32 0 693 183 0 9 chr2 164744373 164744488 -85943366 + Tigger3(Golem) DNA MER2_type 1 114 -2915 * 3676 133 81 16 chr2 164744473 164745179 -85942675 + Tigger3(Golem) DNA MER2_type 2278 3029 0 1920 110 10 0 chr2 164745400 164745690 -85942164 - L1PA13 LINE L1 -13 6150 5858 1354 121 70 0 chr2 164745742 164745957 -85941897 - MER30 DNA MER1_type 0 230 1 348 83 0 0 chr2 164746316 164746364 -85941490 + (TG)n Simple_repeat Simple_repeat 2 49 0 217 220 34 0 chr2 164746882 164746941 -85940913 + (TA)n Simple_repeat Simple_repeat 1 61 0 1142 291 47 28 chr2 164746949 164747416 -85940438 + MER74B LTR ERVL 72 547 -75 290 325 113 16 chr2 164747260 164747454 -85940400 - MER88 LTR ERVL -206 258 46 * 220 222 19 0 chr2 164747467 164747521 -85940333 + (CATATA)n Simple_repeat Simple_repeat 4 58 0 32 0 0 0 chr2 164747521 164747553 -85940301 + AT_rich Low_complexity Low_complexity 1 32 0 392 259 224 6 chr2 164747665 164747839 -85940015 + LTR33 LTR ERVL 5 216 -305 319 108 40 40 chr2 164747898 164747949 -85939905 + CT-rich Low_complexity Low_complexity 3 56 -20 1405 146 124 0 chr2 164747949 164748216 -85939638 - AluSx SINE Alu 0 302 3 319 108 40 40 chr2 164748216 164748238 -85939616 + CT-rich Low_complexity Low_complexity 55 76 0 183 80 0 0 chr2 164748860 164748885 -85938969 + (TCTA)n Simple_repeat Simple_repeat 2 26 0 196 270 16 32 chr2 164749555 164749618 -85938236 - MIR SINE MIR -131 77 16 339 130 0 0 chr2 164750902 164750956 -85936898 + (TC)n Simple_repeat Simple_repeat 1 54 0 2351 238 116 44 chr2 164751109 164752460 -85935394 + L1ME1 LINE L1 3781 5228 -918 2817 238 30 47 chr2 164752469 164753301 -85934553 + L1ME1 LINE L1 5273 6090 -76 540 56 111 0 chr2 164753319 164754083 -85933771 + (TA)n Simple_repeat Simple_repeat 1 849 0 24 32 0 0 chr2 164754469 164754500 -85933354 + AT_rich Low_complexity Low_complexity 1 31 0 3571 179 43 33 chr2 164754749 164755567 -85932287 + LTR1B LTR ERV1 1 826 0 2271 89 0 3 chr2 164756228 164756520 -85931334 + AluY SINE Alu 3 293 -18 23 0 0 0 chr2 164757771 164757794 -85930060 + AT_rich Low_complexity Low_complexity 1 23 0 1592 123 127 8 chr2 164757875 164758135 -85929719 + AluSg SINE Alu 1 291 -19 2308 90 0 10 chr2 164759363 164759663 -85928191 - AluY SINE Alu -14 297 1 961 244 7 18 chr2 164759718 164759992 -85927862 + L1M2 LINE L1 2245 2515 -4334 867 162 7 0 chr2 164759996 164760150 -85927704 - L1PA13 LINE L1 -17 6146 5992 1077 151 0 0 chr2 164760155 164760345 -85927509 + AluSg/x SINE Alu 123 312 0 1444 210 43 34 chr2 164760352 164761078 -85926776 + L1M2 LINE L1 3664 4493 -2355 * 9485 200 38 55 chr2 164761071 164764027 -85923827 + L1PA16 LINE L1 427 3430 -4135 3813 151 32 5 chr2 164764027 164764683 -85923171 + L1PA16 LINE L1 6903 7576 -9 9485 200 38 55 chr2 164764683 164765135 -85922719 + L1PA16 LINE L1 3430 3888 -3677 2147 53 46 7 chr2 164765135 164765418 -85922436 + AluY SINE Alu 1 294 -17 9485 200 38 55 chr2 164765418 164765579 -85922275 + L1PA16 LINE L1 3888 4616 -2949 512 160 0 11 chr2 164765680 164765774 -85922080 + THE1C-int LTR MaLR 1486 1578 -2 1761 150 76 17 chr2 164765776 164766130 -85921724 + THE1C LTR MaLR 1 375 0 28 29 0 0 chr2 164766478 164766513 -85921341 + AT_rich Low_complexity Low_complexity 1 35 0 307 252 126 17 chr2 164766562 164766681 -85921173 + L2 LINE L2 3178 3309 -4 2480 139 33 49 chr2 164766846 164767336 -85920518 + L1MA2 LINE L1 5816 6297 -7 22 0 0 0 chr2 164767415 164767437 -85920417 + AT_rich Low_complexity Low_complexity 1 22 0 6787 29 0 2 chr2 164768026 164769154 -85918700 + L1PA3 LINE L1 4934 6059 -96 3051 193 50 3 chr2 164769254 164769870 -85917984 + MLT1-int LTR MaLR 88 732 -639 353 262 12 0 chr2 164769973 164770057 -85917797 + MLT1-int LTR MaLR 673 757 -978 1892 271 15 6 chr2 164770125 164770621 -85917233 + MLT1B-int LTR MaLR 953 1370 -1 1423 189 60 49 chr2 164770622 164770802 -85917052 + MLT1B LTR MaLR 1 178 -212 279 93 0 0 chr2 164770802 164770845 -85917009 + (TG)n Simple_repeat Simple_repeat 2 44 0 1423 189 60 49 chr2 164770845 164771050 -85916804 + MLT1B LTR MaLR 178 390 0 186 216 78 0 chr2 164771160 164771211 -85916643 - L2 LINE L2 -8 3264 3210 1137 193 29 8 chr2 164772419 164772663 -85915191 - L1MB5 LINE L1 0 6174 5926 538 286 117 0 chr2 164774183 164774354 -85913500 - MIR SINE MIR -24 238 48 267 313 12 0 chr2 164774575 164774655 -85913199 - L2 LINE L2 -4 3309 3229 4492 185 49 10 chr2 164774655 164775312 -85912542 + L1MA9 LINE L1 4251 4881 -1431 2226 107 0 0 chr2 164775312 164775603 -85912251 + AluSg SINE Alu 1 291 -19 4492 185 49 10 chr2 164775603 164776535 -85911319 + L1MA9 LINE L1 4881 5903 -409 1791 182 44 62 chr2 164776635 164777184 -85910670 + L1M1 LINE L1 3239 3777 -2369 2786 168 37 2 chr2 164777279 164778204 -85909650 + L1M1 LINE L1 4774 5728 -577 1225 293 78 11 chr2 164778201 164778959 -85908895 + L1ME3A LINE L1 3161 3969 -2177 * 2158 265 52 8 chr2 164778976 164779688 -85908166 + L1ME3A LINE L1 5418 6160 -10 425 51 39 13 chr2 164779692 164779770 -85908084 + (TA)n Simple_repeat Simple_repeat 1 80 0 1661 194 104 40 chr2 164779770 164780240 -85907614 - MLT1D LTR MaLR -1 504 5 277 134 15 15 chr2 164780240 164780307 -85907547 + (TG)n Simple_repeat Simple_repeat 2 68 0 218 343 120 0 chr2 164780389 164780497 -85907357 + MIR3 SINE MIR 49 169 -39 488 265 56 31 chr2 164782694 164782892 -85904962 - MIR SINE MIR -48 214 13 303 311 114 79 chr2 164782955 164783299 -85904555 - L1MC4a LINE L1 -1920 5888 5515 1359 173 23 0 chr2 164783299 164783559 -85904295 - L1MA6 LINE L1 0 6300 6035 303 311 114 79 chr2 164783559 164783774 -85904080 - L1MC4a LINE L1 -2293 5515 5309 2307 95 7 0 chr2 164783790 164784085 -85903769 - AluSx SINE Alu -11 301 5 21 0 0 0 chr2 164784170 164784191 -85903663 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr2 164784646 164784669 -85903185 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 470 371 130 23 chr2 164786280 164786924 -85900930 + L2 LINE L2 1362 2074 -1240 420 143 0 0 chr2 164786930 164787000 -85900854 + (CA)n Simple_repeat Simple_repeat 2 71 0 317 366 125 49 chr2 164787141 164787469 -85900385 + L2 LINE L2 2920 3272 0 438 319 83 75 chr2 164787499 164787765 -85900089 + L3 LINE CR1 228 495 -1082 8413 106 14 1 chr2 164787793 164789900 -85897954 + L1PA8 LINE L1 4096 6194 0 265 256 35 35 chr2 164789920 164789931 -85897923 + L3 LINE CR1 592 602 -975 2403 115 19 16 chr2 164789931 164790305 -85897549 + THE1C LTR MaLR 1 375 0 265 256 35 35 chr2 164790305 164790379 -85897475 + L3 LINE CR1 601 677 -900 188 35 35 0 chr2 164790380 164790409 -85897445 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 339 285 39 62 chr2 164790441 164790571 -85897283 + L3 LINE CR1 1450 1576 -1 250 387 47 33 chr2 164791474 164791748 -85896106 + L2 LINE L2 2510 2787 -527 219 331 145 28 chr2 164793255 164793343 -85894511 + MER5B DNA MER1_type 14 90 -88 216 0 0 0 chr2 164793343 164793367 -85894487 + (TG)n Simple_repeat Simple_repeat 2 25 0 219 331 145 28 chr2 164793367 164793423 -85894431 + MER5B DNA MER1_type 90 175 -3 313 233 76 135 chr2 164794455 164794695 -85893159 + MIR SINE MIR 47 262 0 225 0 0 0 chr2 164795668 164795693 -85892161 + (TG)n Simple_repeat Simple_repeat 2 26 0 314 368 45 0 chr2 164796329 164796462 -85891392 + MER91A DNA MER1_type 10 148 -48 1650 192 54 0 chr2 164797466 164797800 -85890054 - MER46B DNA MER2_type -9 227 1 23 0 0 0 chr2 164797910 164797933 -85889921 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr2 164800061 164800093 -85887761 + (CA)n Simple_repeat Simple_repeat 2 33 0 297 375 10 10 chr2 164800421 164800525 -85887329 + MIR SINE MIR 31 134 -74 420 143 0 0 chr2 164801671 164801741 -85886113 + (GGAA)n Simple_repeat Simple_repeat 1 70 0 395 316 101 13 chr2 164803044 164803202 -85884652 - MIR SINE MIR -27 235 64 850 252 14 18 chr2 164803230 164803448 -85884406 + MER20 DNA MER1_type 1 217 -2 234 220 0 0 chr2 164803740 164803799 -85884055 + (TA)n Simple_repeat Simple_repeat 1 59 0 546 263 105 7 chr2 164803916 164804068 -85883786 - MIR SINE MIR -92 170 4 1127 189 49 4 chr2 164804396 164804640 -85883214 + L1MA4 LINE L1 6037 6291 -9 627 245 27 7 chr2 164805148 164805295 -85882559 + MIR SINE MIR 63 212 -50 184 226 0 57 chr2 164805788 164805841 -85882013 - L2 LINE L2 0 3272 3223 * 333 315 144 17 chr2 164805807 164805988 -85881866 - MIR SINE MIR -10 252 49 457 350 132 15 chr2 164806094 164806683 -85881171 + L2 LINE L2 1749 2406 -908 224 295 82 0 chr2 164806685 164806746 -85881108 + L2 LINE L2 2584 2649 -665 563 358 108 13 chr2 164806999 164807396 -85880458 - L2 LINE L2 -1 3312 2878 740 302 98 67 chr2 164807409 164807932 -85879922 + MLT1H LTR MaLR 1 539 -10 551 317 75 29 chr2 164807993 164808299 -85879555 - L2 LINE L2 -1219 2095 1776 793 310 53 0 chr2 164809679 164809960 -85877894 + LTR16B LTR ERVL 36 331 -133 1840 334 39 51 chr2 164809976 164811162 -85876692 + ERVL LTR ERVL 2614 3785 -1979 1341 169 43 128 chr2 164811165 164811586 -85876268 - MLT1B LTR MaLR -5 385 1 24 32 0 0 chr2 164811708 164811739 -85876115 + AT_rich Low_complexity Low_complexity 1 31 0 1081 194 40 49 chr2 164811756 164812003 -85875851 - AluJo SINE Alu -26 286 42 16346 29 5 0 chr2 164813527 164816251 -85871603 + L1PA4 LINE L1 3429 6155 0 180 306 16 0 chr2 164817333 164817395 -85870459 - MIR SINE MIR 0 262 200 292 211 0 0 chr2 164817707 164817759 -85870095 - MER92C LTR ERV1 -19 535 484 333 247 0 35 chr2 164817988 164818073 -85869781 - MER92B LTR ERV1 -554 82 1 308 319 60 0 chr2 164819153 164819269 -85868585 + MIR SINE MIR 84 206 -56 322 254 89 93 chr2 164820019 164820255 -85867599 + L2 LINE L2 2989 3223 -90 500 272 42 38 chr2 164820255 164820468 -85867386 - LTR16C LTR ERVL -2 489 276 320 244 77 2 chr2 164820960 164821116 -85866738 - MER58B DNA MER1_type 0 341 31 12414 141 27 6 chr2 164821630 164823656 -85864198 + Tigger1 DNA MER2_type 107 2174 -244 1191 260 98 32 chr2 164823670 164824416 -85863438 - L1ME LINE L1 -2575 3505 2711 4860 144 29 1 chr2 164824417 164825218 -85862636 - HSMAR2 DNA Mariner -478 824 2 273 57 0 0 chr2 164825228 164825263 -85862591 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 1956 173 10 50 chr2 164825266 164825666 -85862188 - MLT1B LTR MaLR -6 384 1 719 292 68 26 chr2 164825814 164826527 -85861327 - L1ME LINE L1 -4917 1165 529 690 315 98 35 chr2 164826783 164827183 -85860671 - L1ME LINE L1 -5630 440 16 21 57 0 0 chr2 164828448 164828483 -85859371 + AT_rich Low_complexity Low_complexity 1 35 0 1615 173 0 4 chr2 164828651 164828911 -85858943 + AluJb SINE Alu 33 291 -21 21 82 0 0 chr2 164829566 164829615 -85858239 + AT_rich Low_complexity Low_complexity 1 49 0 2170 94 7 0 chr2 164830240 164830549 -85857305 - L1PA8 LINE L1 -4 6168 5858 30204 128 12 60 chr2 164830576 164833585 -85854269 - L1PA8 LINE L1 -581 5591 3011 3610 110 0 12 chr2 164833585 164834102 -85853752 + MER9 LTR ERVK 1 511 0 30204 128 12 60 chr2 164834102 164836975 -85850879 - L1PA8 LINE L1 -3161 3011 2 268 372 62 0 chr2 164837372 164837485 -85850369 - L3 LINE CR1 -74 1503 1384 180 111 0 0 chr2 164838205 164838232 -85849622 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 256 284 23 11 chr2 164838990 164839078 -85848776 - MIR3 SINE MIR -6 202 114 341 315 56 7 chr2 164839258 164839401 -85848453 - MIR SINE MIR -93 169 20 2829 183 87 5 chr2 164839571 164840200 -85847654 - L1MB7 LINE L1 -31 6153 5473 337 291 146 34 chr2 164840204 164840499 -85847355 - L1ME4a LINE L1 -218 5903 5576 387 0 0 0 chr2 164841391 164841434 -85846420 + (TC)n Simple_repeat Simple_repeat 2 44 0 252 0 0 0 chr2 164841433 164841461 -85846393 + (TG)n Simple_repeat Simple_repeat 1 28 0 * 228 290 58 58 chr2 164841725 164841863 -85845991 - HAL1 LINE L1 -263 2244 2107 1240 305 81 17 chr2 164841871 164842576 -85845278 - HAL1 LINE L1 -475 2032 1283 25 31 0 0 chr2 164842576 164842608 -85845246 + AT_rich Low_complexity Low_complexity 1 32 0 4464 146 14 0 chr2 164842614 164843341 -85844513 - L1PA15 LINE L1 -6 6159 5423 5045 84 39 0 chr2 164843341 164844058 -85843796 + L1PA13 LINE L1 5411 6156 -7 326 180 27 9 chr2 164844506 164844617 -85843237 + (TA)n Simple_repeat Simple_repeat 2 114 0 22 70 0 0 chr2 164844662 164844705 -85843149 + AT_rich Low_complexity Low_complexity 1 43 0 21 100 0 0 chr2 164844802 164844872 -85842982 + AT_rich Low_complexity Low_complexity 1 70 0 3871 137 74 85 chr2 164844982 164846376 -85841478 + pTR5 LTR ERV1 741 2438 0 2227 236 4 4 chr2 164846495 164846962 -85840892 + MLT1C LTR MaLR 1 467 0 356 320 180 21 chr2 164847113 164847541 -85840313 - L2 LINE L2 -5 3308 2813 229 198 49 37 chr2 164847845 164847926 -85839928 + MLT1K LTR MaLR 399 480 -108 529 330 65 48 chr2 164848375 164848599 -85839255 + L2 LINE L2 2813 3049 -264 2492 43 0 17 chr2 164848599 164848900 -85838954 - AluY SINE Alu -15 296 1 529 330 65 48 chr2 164848900 164849087 -85838767 + L2 LINE L2 3049 3231 -82 904 195 29 0 chr2 164849087 164849292 -85838562 - L1MA9 LINE L1 0 6312 6102 607 207 0 0 chr2 164849295 164849406 -85838448 - Tigger1 DNA MER2_type -12 2406 2296 245 88 0 0 chr2 164849406 164849440 -85838414 - Tigger1 DNA MER2_type -85 2333 2300 382 184 58 11 chr2 164849446 164849533 -85838321 + L1ME1 LINE L1 3569 3659 -2487 * 1827 250 28 5 chr2 164849529 164850105 -85837749 - L1 LINE L1 -2709 3437 2849 310 190 26 17 chr2 164850124 164850240 -85837614 + L1ME1 LINE L1 4399 4515 -1631 271 57 0 91 chr2 164850262 164850350 -85837504 + (TA)n Simple_repeat Simple_repeat 1 80 0 999 239 8 4 chr2 164850420 164850675 -85837179 + L1ME1 LINE L1 4614 4869 -1277 2076 190 41 41 chr2 164850725 164851210 -85836644 + MLT1D LTR MaLR 21 505 0 1868 256 72 57 chr2 164851214 164852381 -85835473 + L1ME1 LINE L1 4901 6093 -73 240 35 0 0 chr2 164852381 164852410 -85835444 + (TA)n Simple_repeat Simple_repeat 2 30 0 1868 256 72 57 chr2 164852410 164852477 -85835377 + L1ME1 LINE L1 6093 6157 -9 629 276 35 65 chr2 164852494 164852835 -85835019 + L1ME2 LINE L1 5825 6155 -9 953 330 68 22 chr2 164853444 164853902 -85833952 - MLT1K LTR MaLR -16 572 94 5830 96 64 0 chr2 164854610 164855751 -85832103 - L1PA12 LINE L1 -3 6165 4973 3132 166 7 13 chr2 164855755 164856353 -85831501 + L1PA13 LINE L1 1602 2195 -4592 376 213 0 0 chr2 164856814 164856889 -85830965 + MLT1K LTR MaLR 506 580 -8 25 0 0 0 chr2 164857593 164857618 -85830236 + AT_rich Low_complexity Low_complexity 1 25 0 248 337 59 48 chr2 164857656 164857843 -85830011 + MER5A DNA MER1_type 1 189 0 22 0 0 0 chr2 164858659 164858681 -85829173 + AT_rich Low_complexity Low_complexity 1 22 0 222 270 130 43 chr2 164859092 164859207 -85828647 - L2 LINE L2 -5 3267 3143 323 353 10 0 chr2 164859546 164859648 -85828206 - L2 LINE L2 -20 3293 3191 308 328 125 39 chr2 164859680 164860113 -85827741 + L2 LINE L2 2013 2482 -832 2851 103 51 14 chr2 164860455 164860839 -85827015 + MLT2A1 LTR ERVL 1 404 -40 189 107 0 0 chr2 164860839 164860867 -85826987 + (TA)n Simple_repeat Simple_repeat 2 29 0 2851 103 51 14 chr2 164860867 164860910 -85826944 + MLT2A1 LTR ERVL 404 444 0 1750 188 0 16 chr2 164861251 164861559 -85826295 + AluJb SINE Alu 1 303 -9 214 183 28 0 chr2 164862438 164862509 -85825345 + (TA)n Simple_repeat Simple_repeat 1 73 0 23 0 0 0 chr2 164862590 164862613 -85825241 + AT_rich Low_complexity Low_complexity 1 23 0 371 306 23 91 chr2 164863811 164864030 -85823824 - MIR SINE MIR -8 254 51 259 331 131 0 chr2 164864226 164864371 -85823483 + MER5A DNA MER1_type 26 189 0 192 360 20 10 chr2 164864997 164865097 -85822757 - L2 LINE L2 -291 2981 2881 2205 114 0 16 chr2 164865211 164865528 -85822326 - AluSq SINE Alu -1 312 1 455 299 62 21 chr2 164866223 164866372 -85821482 - MER5A DNA MER1_type -19 170 5 1887 235 19 26 chr2 164867323 164867897 -85819957 - L1M4 LINE L1 -1481 4665 4096 240 297 54 27 chr2 164867999 164868147 -85819707 + HAL1 LINE L1 1897 2048 -459 234 0 0 0 chr2 164868537 164868563 -85819291 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 405 0 0 0 chr2 164868562 164868607 -85819247 + (GA)n Simple_repeat Simple_repeat 2 46 0 375 285 41 0 chr2 164869786 164869909 -85817945 - MIR3 SINE MIR -6 202 75 184 382 13 0 chr2 164869970 164870046 -85817808 - MIR3 SINE MIR -15 193 117 461 277 39 30 chr2 164871100 164871251 -85816603 + MER5A DNA MER1_type 5 170 -19 431 209 0 0 chr2 164871952 164872038 -85815816 + AluS SINE Alu 5 90 -222 537 296 117 35 chr2 164872418 164872648 -85815206 - MIR SINE MIR -11 251 3 6878 41 10 2 chr2 164873730 164874674 -85813180 - L1PA5 LINE L1 -47 6107 5158 2345 32 0 0 chr2 164874674 164874958 -85812896 + L1PA5 LINE L1 4854 5137 -1009 1501 197 89 11 chr2 164874969 164875340 -85812514 + L1MCb LINE L1 723 1122 -4923 223 255 64 0 chr2 164875565 164875612 -85812242 + MIR SINE MIR 21 70 -192 2084 152 28 11 chr2 164875721 164876077 -85811777 + THE1B LTR MaLR 3 364 0 33 25 0 0 chr2 164876967 164877007 -85810847 + AT_rich Low_complexity Low_complexity 1 40 0 332 331 14 35 chr2 164877654 164877796 -85810058 + MIR SINE MIR 25 163 -99 24 0 0 0 chr2 164877929 164877953 -85809901 + AT_rich Low_complexity Low_complexity 1 24 0 2053 137 0 0 chr2 164880861 164881160 -85806694 - AluSx SINE Alu -13 299 1 217 196 0 22 chr2 164881245 164881291 -85806563 + (TA)n Simple_repeat Simple_repeat 1 45 0 462 302 84 54 chr2 164882043 164882771 -85805083 - HAL1b LINE L1 -503 845 96 27 0 0 0 chr2 164883015 164883042 -85804812 + AT_rich Low_complexity Low_complexity 1 27 0 2117 112 0 10 chr2 164884035 164884330 -85803524 + AluSq SINE Alu 9 300 -13 1668 139 8 0 chr2 164886728 164886893 -85800961 - AluJo SINE Alu -15 297 135 282 29 0 0 chr2 164886893 164886928 -85800926 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2385 67 0 0 chr2 164886928 164887212 -85800642 - AluY SINE Alu -27 284 1 1668 139 8 0 chr2 164887212 164887297 -85800557 - AluJo SINE Alu -176 136 44 3132 152 49 3 chr2 164887835 164888402 -85799452 - L1MC1 LINE L1 0 6333 5741 1057 159 24 0 chr2 164888402 164888609 -85799245 + L1PA8 LINE L1 5858 6069 -103 3086 157 49 3 chr2 164889147 164889714 -85798140 - L1MC1 LINE L1 0 6333 5741 2286 86 0 0 chr2 164889714 164890028 -85797826 + L1PA8 LINE L1 5858 6171 -1 3284 203 47 11 chr2 164890032 164890487 -85797367 - L1MC1 LINE L1 -579 5754 5317 1786 103 0 0 chr2 164890487 164890721 -85797133 + AluSc SINE Alu 65 298 -11 3284 203 47 11 chr2 164890721 164891047 -85796807 - L1MC1 LINE L1 -1016 5317 5004 180 0 0 0 chr2 164891047 164891067 -85796787 + (TTTTA)n Simple_repeat Simple_repeat 5 24 0 3284 203 47 11 chr2 164891067 164891577 -85796277 - L1MC1 LINE L1 -1329 5004 4409 247 278 42 0 chr2 164892164 164892236 -85795618 - L2 LINE L2 -7 3306 3232 354 286 0 16 chr2 164892925 164893051 -85794803 + (TATATG)n Simple_repeat Simple_repeat 6 129 0 237 196 0 0 chr2 164893844 164893895 -85793959 + (TA)n Simple_repeat Simple_repeat 2 52 0 378 285 49 14 chr2 164894029 164894173 -85793681 + L1 LINE L1 3688 3836 -2310 318 225 62 0 chr2 164895456 164895536 -85792318 - HsTC2 DNA Tc2 -1 1897 1813 357 24 0 0 chr2 164895725 164895767 -85792087 + (CA)n Simple_repeat Simple_repeat 1 42 0 195 254 175 0 chr2 164896428 164896491 -85791363 + MER5A DNA MER1_type 40 113 -76 187 263 105 0 chr2 164896483 164896540 -85791314 - MER5B DNA MER1_type -115 63 1 * 30 69 0 0 chr2 164896771 164896829 -85791025 + AT_rich Low_complexity Low_complexity 1 58 0 232 244 13 26 chr2 164896964 164897042 -85790812 + (TATATG)n Simple_repeat Simple_repeat 3 79 0 276 111 0 0 chr2 164897052 164897088 -85790766 - U2 snRNA snRNA -152 36 1 30 27 0 0 chr2 164897801 164897838 -85790016 + AT_rich Low_complexity Low_complexity 1 37 0 475 336 56 17 chr2 164899386 164899618 -85788236 - MIR SINE MIR -13 249 9 5495 70 1 1 chr2 164899846 164900586 -85787268 + pTR5 LTR ERV1 393 2468 0 * 21993 98 5 11 chr2 164900586 164903665 -85784189 + HERV17 LTR ERV1 79 3139 -5260 6338 100 3 12 chr2 164903672 164904575 -85783279 + HERV17 LTR ERV1 4080 4974 -3425 1880 118 25 32 chr2 164904542 164905422 -85782432 + HERV17 LTR ERV1 703 1720 -5176 * 4643 100 3 0 chr2 164905416 164906058 -85781796 + HERV17 LTR ERV1 7756 8399 0 4391 69 128 2 chr2 164906058 164906669 -85781185 + LTR12 LTR ERV1 1 688 0 1479 248 52 7 chr2 164906848 164907272 -85780582 + LTR47B LTR ERVL 1 443 0 412 259 22 37 chr2 164907687 164907822 -85780032 - Charlie8 DNA MER1_type -2201 216 84 270 241 0 0 chr2 164909977 164910035 -85777819 - MER103 DNA DNA -57 109 52 225 0 0 0 chr2 164910243 164910268 -85777586 + (TG)n Simple_repeat Simple_repeat 1 25 0 21 36 0 0 chr2 164911033 164911061 -85776793 + AT_rich Low_complexity Low_complexity 1 28 0 3587 136 55 50 chr2 164911513 164912236 -85775618 + LTR8A LTR ERV1 1 727 0 1114 245 9 0 chr2 164912236 164912452 -85775402 + HUERS-P1 LTR ERV1 1 218 -6045 261 135 19 39 chr2 164912581 164912633 -85775221 + HUERS-P1 LTR ERV1 475 525 -5738 6638 210 31 23 chr2 164912703 164913762 -85774092 + HUERS-P1 LTR ERV1 662 1572 -4374 1839 145 78 20 chr2 164913762 164914106 -85773748 - THE1B LTR MaLR 0 364 1 6638 210 31 23 chr2 164914106 164914562 -85773292 + HUERS-P1 LTR ERV1 1572 2023 -3923 1569 212 74 104 chr2 164914570 164915069 -85772785 + HUERS-P1 LTR ERV1 2931 3414 -4123 724 244 38 48 chr2 164915139 164915430 -85772424 + HUERS-P1 LTR ERV1 1824 2111 -4487 * 7010 203 76 55 chr2 164915425 164917624 -85770230 + HUERS-P1 LTR ERV1 3652 5790 -541 1204 163 147 49 chr2 164917646 164917972 -85769882 + HUERS-P1 LTR ERV1 5914 6271 -60 771 274 11 0 chr2 164918121 164918307 -85769547 + HUERS-P1 LTR ERV1 6076 6263 0 2585 150 65 12 chr2 164918307 164918799 -85769055 + LTR8A LTR ERV1 1 518 -209 3823 78 29 100 chr2 164918811 164919462 -85768392 + LTR14B LTR ERVK 4 608 0 850 250 0 21 chr2 164919472 164919660 -85768194 + LTR8 LTR ERV1 497 680 -11 1431 181 144 34 chr2 164919901 164920344 -85767510 + LTR54B LTR ERV1 1 492 -6 529 258 39 38 chr2 164920406 164920688 -85767166 + LTR49-int LTR ERV1 1995 2239 -4092 459 224 61 20 chr2 164920661 164920808 -85767046 + LTR49-int LTR ERV1 329 481 -7056 * 515 196 8 162 chr2 164920940 164921186 -85766668 + LTR49-int LTR ERV1 478 3352 -4185 808 202 0 86 chr2 164921212 164921445 -85766409 + LTR49-int LTR ERV1 617 829 -6708 278 250 57 32 chr2 164921526 164921650 -85766204 + LTR49-int LTR ERV1 2551 2677 -3654 1601 166 3 24 chr2 164921661 164921951 -85765903 - AluSg SINE Alu -17 293 10 2164 85 3 38 chr2 164922085 164922401 -85765453 - AluSc SINE Alu -4 305 1 2173 89 3 10 chr2 164922411 164922703 -85765151 - AluSx SINE Alu -14 298 9 1629 185 34 0 chr2 164922722 164923019 -85764835 + LOR1b LTR ERV1 155 461 0 390 277 106 21 chr2 164923792 164923933 -85763921 - MIR SINE MIR -1 261 109 444 216 40 32 chr2 164923939 164924064 -85763790 + L2 LINE L2 2395 2520 -794 4472 132 40 6 chr2 164924462 164925415 -85762439 + L1MA6 LINE L1 5095 6080 -220 1287 107 123 7 chr2 164925415 164925717 -85762137 + Charlie3 DNA MER1_type 1 2527 -183 851 189 0 16 chr2 164925817 164926002 -85761852 + L1MA8 LINE L1 4973 5154 -992 * 5029 150 19 21 chr2 164926000 164927070 -85760784 + L1MA8 LINE L1 5106 6164 -127 9004 144 8 1 chr2 164927171 164928673 -85759181 - L1P LINE L1 -1640 4506 2995 25 31 0 0 chr2 164929323 164929355 -85758499 + AT_rich Low_complexity Low_complexity 1 32 0 248 298 25 41 chr2 164929509 164929630 -85758224 - MIR SINE MIR -111 151 33 * 283 349 63 16 chr2 164929620 164929746 -85758108 - L2 LINE L2 -4 3268 3137 845 117 0 71 chr2 164930591 164930745 -85757109 + L1 LINE L1 4674 4816 -1330 829 138 31 19 chr2 164930743 164930902 -85756952 + L1MA8 LINE L1 6021 6181 -110 * 24 53 0 0 chr2 164930902 164930940 -85756914 + AT_rich Low_complexity Low_complexity 1 38 0 1488 230 39 26 chr2 164931792 164931899 -85755955 + L1MB5 LINE L1 4080 4184 -1962 2059 133 130 18 chr2 164931899 164932284 -85755570 + MSTA LTR MaLR 1 428 0 1488 230 39 26 chr2 164932284 164932816 -85755038 + L1MB5 LINE L1 4184 4821 -1325 2789 211 38 49 chr2 164932894 164933662 -85754192 + L1MB5 LINE L1 4821 5564 -610 2050 119 20 0 chr2 164933662 164933956 -85753898 + AluSq SINE Alu 1 300 -13 2789 211 38 49 chr2 164933956 164934414 -85753440 + L1MB5 LINE L1 5564 6026 -148 1650 147 46 46 chr2 164934573 164934967 -85752887 + L1MA4A LINE L1 5906 6299 -4 780 269 70 8 chr2 164934988 164935244 -85752610 + LTR16B LTR ERVL 191 462 -2 1393 349 53 17 chr2 164935271 164936139 -85751715 + HERV16 LTR ERVL 96 994 -4002 981 308 106 21 chr2 164936296 164937056 -85750798 + HERV16 LTR ERVL 1200 2078 -2918 367 295 114 18 chr2 164937602 164937768 -85750086 - MIR SINE MIR -69 193 12 561 245 20 34 chr2 164937770 164937917 -85749937 - MIR SINE MIR -1 261 117 296 345 126 0 chr2 164939085 164939259 -85748595 - MIR SINE MIR -19 243 48 2188 88 14 0 chr2 164939377 164939660 -85748194 - AluSc SINE Alu -18 291 5 244 333 25 0 chr2 164940494 164940575 -85747279 - MIR3 SINE MIR 0 208 126 1050 132 103 5 chr2 164941952 164942156 -85745698 + L1MA3 LINE L1 6079 6302 -3 30 0 0 0 chr2 164942156 164942186 -85745668 + AT_rich Low_complexity Low_complexity 1 30 0 453 370 15 27 chr2 164942297 164942559 -85745295 + HAL1 LINE L1 812 1070 -1437 2826 159 33 74 chr2 164942564 164942981 -85744873 + L1PB1 LINE L1 5449 5825 -326 432 0 0 0 chr2 164942981 164943029 -85744825 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 2826 159 33 74 chr2 164943029 164943340 -85744514 + L1PB1 LINE L1 5825 6147 -4 228 255 124 52 chr2 164943353 164943506 -85744348 + L1MC4a LINE L1 5811 5974 -1834 23 33 0 0 chr2 164943637 164943667 -85744187 + AT_rich Low_complexity Low_complexity 1 30 0 230 276 102 41 chr2 164943804 164943902 -85743952 - L2 LINE L2 -7 3306 3203 28 86 0 0 chr2 164946729 164946799 -85741055 + AT_rich Low_complexity Low_complexity 1 70 0 22 35 0 0 chr2 164947709 164947738 -85740116 + AT_rich Low_complexity Low_complexity 1 29 0 209 170 19 19 chr2 164949341 164949394 -85738460 + (TTTAA)n Simple_repeat Simple_repeat 5 57 0 361 254 51 29 chr2 164949626 164949764 -85738090 + LTR67 LTR ERVL 417 557 0 236 146 36 36 chr2 164951378 164951433 -85736421 - L2 LINE L2 -9 3304 3250 209 296 222 9 chr2 164952033 164952141 -85735713 + MIR SINE MIR 82 212 -50 1520 299 131 33 chr2 164952455 164953334 -85734520 + L2 LINE L2 2108 3060 -253 1951 234 95 67 chr2 164953339 164954398 -85733456 - L1MDa LINE L1 -4439 2101 1013 201 244 0 0 chr2 164954417 164954458 -85733396 + CT-rich Low_complexity Low_complexity 2 42 0 279 0 0 0 chr2 164954918 164954949 -85732905 + (CTG)n Simple_repeat Simple_repeat 3 33 0 279 93 0 0 chr2 164955284 164955327 -85732527 + (CA)n Simple_repeat Simple_repeat 2 44 0 513 307 52 16 chr2 164957366 164957558 -85730296 + L3 LINE CR1 1372 1570 -7 1762 191 62 37 chr2 164958202 164958606 -85729248 - MLT2D LTR ERVL 0 414 1 189 0 0 0 chr2 164960715 164960736 -85727118 + (CAAAA)n Simple_repeat Simple_repeat 4 24 0 203 156 0 0 chr2 164961213 164961245 -85726609 + T-rich Low_complexity Low_complexity 5 36 0 418 315 154 7 chr2 164961314 164961463 -85726391 + MER5A DNA MER1_type 12 182 -7 446 349 57 78 chr2 164961477 164961963 -85725891 + L2 LINE L2 2309 2779 -535 777 148 0 0 chr2 164961963 164962098 -85725756 - L1MA7 LINE L1 0 6291 6157 446 349 57 78 chr2 164962098 164962293 -85725561 + L2 LINE L2 2779 2976 -338 454 135 14 0 chr2 164962777 164962851 -85725003 - L1MC/D LINE L1 -655 5704 5630 * 1888 183 4 5 chr2 164962833 164963317 -85724537 + L1MC/D LINE L1 5106 5588 -654 207 0 0 0 chr2 164963317 164963340 -85724514 + (CATAT)n Simple_repeat Simple_repeat 5 27 0 267 261 0 15 chr2 164963639 164963704 -85724150 + MIR SINE MIR 153 216 -46 21 57 0 0 chr2 164963898 164963933 -85723921 + AT_rich Low_complexity Low_complexity 1 35 0 189 74 0 0 chr2 164964846 164964873 -85722981 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 611 335 43 13 chr2 164965147 164965380 -85722474 + MIR SINE MIR 2 241 -21 554 298 107 18 chr2 164966762 164966987 -85720867 + MIR SINE MIR 3 247 -15 196 333 78 39 chr2 164967572 164967701 -85720153 + MIR SINE MIR 127 260 -2 360 259 177 6 chr2 164969884 164970042 -85717812 + MIR SINE MIR 68 252 -10 240 143 0 0 chr2 164970387 164970429 -85717425 + (A)n Simple_repeat Simple_repeat 1 42 0 225 94 0 0 chr2 164970843 164970875 -85716979 + (T)n Simple_repeat Simple_repeat 1 32 0 2159 104 19 10 chr2 164971930 164972239 -85715615 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 164972422 164972443 -85715411 + AT_rich Low_complexity Low_complexity 1 21 0 2251 92 0 3 chr2 164972500 164972804 -85715050 - AluY SINE Alu -8 303 1 2501 211 49 12 chr2 164973076 164973664 -85714190 - MER90 LTR ERV1 -2 612 3 771 266 52 8 chr2 164974232 164974480 -85713374 + MIR SINE MIR 3 261 -1 267 265 238 27 chr2 164974702 164974849 -85713005 + MIR SINE MIR 29 206 -56 25 51 0 0 chr2 164974872 164974911 -85712943 + AT_rich Low_complexity Low_complexity 1 39 0 533 292 200 5 chr2 164975597 164976147 -85711707 + LTR50 LTR ERVL 27 523 0 28 0 0 0 chr2 164976860 164976888 -85710966 + AT_rich Low_complexity Low_complexity 1 28 0 2156 145 176 5 chr2 164977004 164977431 -85710423 + MER61D LTR ERV1 2 501 0 21 82 0 0 chr2 164978962 164979011 -85708843 + AT_rich Low_complexity Low_complexity 1 49 0 1393 201 62 27 chr2 164979327 164979665 -85708189 - MLT1A1 LTR MaLR -11 354 5 335 311 115 7 chr2 164979804 164979952 -85707902 - L3 LINE CR1 -2 1575 1412 579 256 6 6 chr2 164980292 164980456 -85707398 - MER103 DNA DNA -2 164 1 23 33 0 0 chr2 164980979 164981009 -85706845 + AT_rich Low_complexity Low_complexity 1 30 0 276 30 0 0 chr2 164981760 164981793 -85706061 + (CA)n Simple_repeat Simple_repeat 2 34 0 328 306 41 54 chr2 164982138 164982285 -85705569 + MIR SINE MIR 41 185 -77 263 314 0 12 chr2 164982338 164982424 -85705430 + CT-rich Low_complexity Low_complexity 5 89 0 181 326 134 62 chr2 164983561 164983868 -85703986 + L2 LINE L2 2985 3313 0 207 100 0 0 chr2 164983921 164983951 -85703903 + (CA)n Simple_repeat Simple_repeat 2 31 0 26 0 0 0 chr2 164984129 164984155 -85703699 + AT_rich Low_complexity Low_complexity 1 26 0 195 218 0 0 chr2 164984272 164984327 -85703527 + (TATG)n Simple_repeat Simple_repeat 2 56 0 194 250 83 12 chr2 164984341 164984425 -85703429 - MIR SINE MIR -80 128 39 187 340 117 10 chr2 164984845 164984948 -85702906 - MIR SINE MIR -129 133 20 230 229 86 0 chr2 164986119 164986189 -85701665 - REP3 LTR ERV -7 555 480 1398 258 48 0 chr2 164986208 164986522 -85701332 - REP3 LTR ERV -231 331 3 2619 126 28 14 chr2 164986848 164987270 -85700584 - MSTA LTR MaLR 0 428 1 8468 175 24 43 chr2 164987270 164988953 -85698901 - MSTA-int LTR MaLR 0 1651 1 2471 142 41 14 chr2 164988953 164989229 -85698625 - MSTA LTR MaLR 0 428 136 2357 129 5 24 chr2 164989229 164989600 -85698254 - THE1B LTR MaLR 0 364 1 2471 142 41 14 chr2 164989600 164989738 -85698116 - MSTA LTR MaLR -292 136 3 395 258 50 13 chr2 164989891 164990050 -85697804 - L1ME LINE L1 -334 5787 5623 1056 269 55 60 chr2 164990053 164990488 -85697366 - LTR16A LTR ERVL -2 448 16 546 298 72 24 chr2 164990494 164990786 -85697068 - L1ME LINE L1 -2185 5623 5318 523 306 119 42 chr2 164991806 164992375 -85695479 - L1ME LINE L1 -1172 4974 4362 21 0 0 0 chr2 164992386 164992407 -85695447 + AT_rich Low_complexity Low_complexity 1 21 0 503 256 30 77 chr2 164992425 164992593 -85695261 + MER63A DNA MER1_type 1 160 0 49 60 0 0 chr2 164992594 164992678 -85695176 + AT_rich Low_complexity Low_complexity 1 84 0 1976 147 83 0 chr2 164993631 164993991 -85693863 - MLT1B LTR MaLR 0 390 1 21 82 0 0 chr2 164996942 164996991 -85690863 + AT_rich Low_complexity Low_complexity 1 49 0 327 376 66 9 chr2 164998087 164998300 -85689554 - L1ME LINE L1 -418 5703 5479 2447 71 0 10 chr2 164998826 164999137 -85688717 - AluY SINE Alu -3 308 1 2084 149 22 8 chr2 164999191 164999547 -85688307 + MLT1A1 LTR MaLR 5 365 0 280 260 78 0 chr2 165000373 165000450 -85687404 + MIR3 SINE MIR 125 207 -1 212 200 18 0 chr2 165000701 165000756 -85687098 + (TA)n Simple_repeat Simple_repeat 2 57 0 426 257 0 0 chr2 165000969 165001074 -85686780 + L1 LINE L1 4793 4897 -1249 411 305 228 4 chr2 165001203 165001462 -85686392 + Charlie7 DNA MER1_type 105 421 -2191 1238 244 43 40 chr2 165001757 165002130 -85685724 - MLT1B LTR MaLR -16 374 1 284 358 30 55 chr2 165002454 165002619 -85685235 + L2 LINE L2 3060 3220 -52 2309 130 11 16 chr2 165003128 165003505 -85684349 - THE1C LTR MaLR 0 375 1 1371 101 14 0 chr2 165005664 165005873 -85681981 - L1MA2 LINE L1 0 6304 6093 610 148 20 0 chr2 165005883 165005984 -85681870 - U6 snRNA snRNA -4 103 1 757 278 86 43 chr2 165006244 165006511 -85681343 + LTR16C LTR ERVL 154 439 -52 2130 119 0 0 chr2 165006511 165006819 -85681035 + AluSx SINE Alu 3 312 0 757 278 86 43 chr2 165006819 165006875 -85680979 + LTR16C LTR ERVL 439 491 0 1453 169 0 20 chr2 165007051 165007299 -85680555 + AluJb SINE Alu 1 243 -69 634 202 0 0 chr2 165007622 165007736 -85680118 - FRAM SINE Alu -5 171 58 322 272 191 7 chr2 165007953 165008100 -85679754 - MER69A DNA AcHobo 0 177 4 320 309 230 21 chr2 165008227 165008418 -85679436 - MIR SINE MIR -16 246 16 9542 136 24 22 chr2 165008422 165008924 -85678930 + Tigger1 DNA MER2_type 1 501 -1917 1931 173 0 0 chr2 165008924 165009231 -85678623 + AluSx SINE Alu 1 307 -5 9542 136 24 22 chr2 165009231 165009900 -85677954 + Tigger1 DNA MER2_type 501 1178 -1240 2348 102 73 14 chr2 165009900 165010244 -85677610 + THE1B LTR MaLR 1 364 0 9542 136 24 22 chr2 165010244 165010673 -85677181 + Tigger1 DNA MER2_type 1178 1605 -813 16541 50 1 0 chr2 165010673 165012761 -85675093 - L1P LINE L1 -1366 4780 2690 243 0 0 0 chr2 165012980 165013007 -85674847 + (TG)n Simple_repeat Simple_repeat 2 28 0 759 291 88 35 chr2 165013023 165014243 -85673611 - L1ME LINE L1 -505 5642 4368 238 281 0 0 chr2 165014447 165014511 -85673343 - MLT1I LTR MaLR 0 409 346 2229 94 17 0 chr2 165014511 165014810 -85673044 + AluSp SINE Alu 1 304 -9 1424 171 0 45 chr2 165015292 165015579 -85672275 - AluJo SINE Alu -2 310 37 431 320 97 58 chr2 165015778 165016760 -85671094 - L1ME LINE L1 -5059 1060 41 548 263 82 47 chr2 165016854 165017086 -85670768 + MIR SINE MIR 23 262 0 239 328 34 25 chr2 165017374 165017493 -85670361 + MER5A DNA MER1_type 43 162 -27 718 261 50 18 chr2 165019297 165019577 -85668277 + L1ME LINE L1 5534 5822 -299 283 312 0 30 chr2 165019716 165019863 -85667991 + L1M3e LINE L1 63 1106 -5992 2203 99 0 0 chr2 165020593 165020900 -85666954 + AluSg SINE Alu 1 307 0 1360 240 100 17 chr2 165021062 165021247 -85666607 + L1M3e LINE L1 1493 1661 -5437 297 0 0 0 chr2 165021247 165021280 -85666574 + (GA)n Simple_repeat Simple_repeat 2 34 0 1360 240 100 17 chr2 165021280 165021925 -85665929 + L1M3e LINE L1 1661 2408 -4690 1938 201 21 3 chr2 165021932 165022305 -85665549 + L1PBa LINE L1 1 380 -6483 * 2764 228 83 19 chr2 165022300 165023318 -85664536 + L1MD2 LINE L1 1136 2219 -4321 1016 229 45 93 chr2 165023339 165023541 -85664313 + L1MD2 LINE L1 2643 2853 -3687 4486 71 3 12 chr2 165023541 165024145 -85663709 + L1PA8 LINE L1 5572 6170 -2 1016 229 45 93 chr2 165024145 165024478 -85663376 + L1MD2 LINE L1 2853 3152 -3388 824 276 52 23 chr2 165024574 165024922 -85662932 + L1MD2 LINE L1 5275 5632 -908 761 70 0 35 chr2 165024988 165025103 -85662751 - AluY SINE Alu -14 297 187 2776 216 53 22 chr2 165025103 165025813 -85662041 + L1MD2 LINE L1 5976 6707 -46 1473 215 26 24 chr2 165025825 165026249 -85661605 + L1ME1 LINE L1 4224 4648 -1892 230 73 24 0 chr2 165026264 165026305 -85661549 + (TA)n Simple_repeat Simple_repeat 1 42 0 746 270 20 8 chr2 165026331 165026583 -85661271 + L1ME1 LINE L1 4837 5091 -1449 1297 206 3 62 chr2 165026588 165026627 -85661227 - AluJo SINE Alu -38 274 234 2380 57 0 20 chr2 165026627 165026926 -85660928 - AluY SINE Alu -18 293 1 1297 206 3 62 chr2 165026926 165027177 -85660677 - AluJo SINE Alu -78 234 1 3405 217 63 29 chr2 165027178 165028610 -85659244 + L1ME1 LINE L1 5074 6555 -5 637 175 44 15 chr2 165028670 165028807 -85659047 + MER6A DNA MER2_type 4 144 -461 2005 118 31 3 chr2 165028807 165029128 -85658726 + MER6A DNA MER2_type 274 603 -2 22 35 0 0 chr2 165029496 165029525 -85658329 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 165031631 165031652 -85656202 + AT_rich Low_complexity Low_complexity 1 21 0 208 321 132 19 chr2 165031798 165031904 -85655950 + L2 LINE L2 2261 2378 -936 313 263 0 0 chr2 165034271 165034351 -85653503 + MER116 DNA Mariner 1 80 0 32 86 0 0 chr2 165034726 165034807 -85653047 + AT_rich Low_complexity Low_complexity 1 81 0 3724 96 0 4 chr2 165035642 165036155 -85651699 + MER9 LTR ERVK 1 511 0 940 191 0 0 chr2 165036494 165036651 -85651203 + AluSp SINE Alu 139 295 -18 1590 173 4 0 chr2 165037051 165037299 -85650555 + AluJo SINE Alu 1 249 -63 262 341 45 12 chr2 165037391 165037668 -85650186 + L1ME LINE L1 5612 5899 -271 251 140 20 0 chr2 165038754 165038804 -85649050 + GA-rich Low_complexity Low_complexity 2 52 0 2210 131 0 0 chr2 165039983 165040296 -85647558 - AluSq SINE Alu 0 313 1 677 207 64 0 chr2 165040337 165040500 -85647354 - FRAM SINE Alu 0 170 1 349 329 43 25 chr2 165041474 165041635 -85646219 + LTR16C LTR ERVL 328 491 0 1014 213 0 11 chr2 165042306 165042489 -85645365 + MER5A DNA MER1_type 8 188 -1 253 309 75 32 chr2 165043407 165043501 -85644353 + MER63A DNA MER1_type 113 210 0 1853 158 7 0 chr2 165043577 165043874 -85643980 - AluJo SINE Alu -13 299 1 1657 267 63 55 chr2 165043978 165044633 -85643221 - L1M4 LINE L1 -5863 679 20 1473 236 65 0 chr2 165044647 165045091 -85642763 - L1MC4 LINE L1 -445 7597 7125 225 348 70 9 chr2 165045130 165045245 -85642609 + L2 LINE L2 3192 3313 0 1278 273 47 56 chr2 165045664 165046214 -85641640 + MER77 LTR ERV1 54 598 -7 307 320 23 8 chr2 165046435 165046563 -85641291 + MLT1I LTR MaLR 280 409 0 1698 199 0 3 chr2 165046817 165047119 -85640735 + AluJo SINE Alu 2 302 -10 355 252 41 0 chr2 165047736 165047859 -85639995 + (TA)n Simple_repeat Simple_repeat 2 129 0 21 36 0 0 chr2 165048180 165048208 -85639646 + AT_rich Low_complexity Low_complexity 1 28 0 2506 56 0 0 chr2 165048339 165048641 -85639213 + AluY SINE Alu 1 302 -9 253 341 22 0 chr2 165048648 165048739 -85639115 - MIR SINE MIR -12 250 158 21 0 0 0 chr2 165051270 165051291 -85636563 + AT_rich Low_complexity Low_complexity 1 21 0 2291 168 16 0 chr2 165051551 165051933 -85635921 + MLT1B LTR MaLR 1 388 -2 186 320 170 59 chr2 165052044 165052197 -85635657 - L2 LINE L2 0 3272 3103 380 330 106 13 chr2 165052392 165052695 -85635159 + L2 LINE L2 2296 2626 -688 234 91 0 0 chr2 165053260 165053293 -85634561 + (TTA)n Simple_repeat Simple_repeat 2 34 0 45 19 0 0 chr2 165053691 165053743 -85634111 + AT_rich Low_complexity Low_complexity 1 52 0 301 207 24 24 chr2 165058267 165058349 -85629505 - MER103 DNA DNA -56 110 29 311 277 110 13 chr2 165059248 165059403 -85628451 - L1ME4a LINE L1 -5 6116 5947 497 317 14 7 chr2 165060859 165061004 -85626850 + MIR3 SINE MIR 17 162 -46 304 349 109 10 chr2 165061685 165061877 -85625977 - MLT1J1 LTR MaLR -235 211 1 456 344 96 0 chr2 165063185 165063415 -85624439 - MLT1J2 LTR MaLR -162 288 37 44 63 0 0 chr2 165063851 165063930 -85623924 + AT_rich Low_complexity Low_complexity 1 79 0 481 246 43 20 chr2 165064130 165064281 -85623573 + MLT1H LTR MaLR 23 142 -267 350 186 42 127 chr2 165064422 165064540 -85623314 + MLT1E3 LTR MaLR 411 564 -31 26 0 0 0 chr2 165066065 165066091 -85621763 + AT_rich Low_complexity Low_complexity 1 26 0 4527 197 38 12 chr2 165066258 165067408 -85620446 + L1MA9 LINE L1 4304 5485 -683 686 253 6 6 chr2 165067413 165067587 -85620267 + FRAM SINE Alu 1 174 -2 2573 209 76 47 chr2 165067587 165067999 -85619855 + L1MA9 LINE L1 5493 5891 -421 243 0 0 0 chr2 165067999 165068026 -85619828 + (TA)n Simple_repeat Simple_repeat 2 28 0 2657 45 0 0 chr2 165068030 165068341 -85619513 - AluY SINE Alu 0 311 1 2573 209 76 47 chr2 165068341 165068675 -85619179 + L1MA9 LINE L1 5893 6266 -46 385 228 0 0 chr2 165068704 165068783 -85619071 + MLT1E3 LTR MaLR 544 622 -2 29 47 0 0 chr2 165068952 165068995 -85618859 + AT_rich Low_complexity Low_complexity 1 43 0 509 284 114 33 chr2 165069404 165069615 -85618239 - MIR SINE MIR -11 251 24 21 36 0 0 chr2 165070517 165070545 -85617309 + AT_rich Low_complexity Low_complexity 1 28 0 35 24 0 0 chr2 165071873 165071915 -85615939 + AT_rich Low_complexity Low_complexity 1 42 0 475 317 100 17 chr2 165073132 165073372 -85614482 - MIR SINE MIR -1 261 2 1744 102 0 0 chr2 165075836 165076072 -85611782 - AluSg/x SINE Alu -2 308 73 238 218 69 23 chr2 165076172 165076259 -85611595 + Zaphod DNA AcHobo 3618 3708 -323 322 302 72 14 chr2 165076273 165076412 -85611442 - L1ME4a LINE L1 -44 6077 5931 23 78 0 0 chr2 165077504 165077555 -85610299 + AT_rich Low_complexity Low_complexity 1 51 0 2632 40 0 0 chr2 165077768 165078071 -85609783 - AluY SINE Alu -8 303 1 250 347 27 27 chr2 165079013 165079163 -85608691 - L1MEd LINE L1 -5665 454 305 272 89 22 0 chr2 165079942 165079987 -85607867 - MADE1 DNA Mariner 0 80 35 409 306 138 14 chr2 165079997 165080344 -85607510 - L1MEc LINE L1 -4745 1565 1176 282 298 66 44 chr2 165080608 165080783 -85607071 - L1MEc LINE L1 -5282 837 667 2130 104 0 49 chr2 165080783 165080928 -85606926 + AluSx SINE Alu 1 152 -160 2066 88 47 10 chr2 165080928 165081224 -85606630 + AluY SINE Alu 2 308 -3 2130 104 0 49 chr2 165081224 165081406 -85606448 + AluSx SINE Alu 152 312 0 282 298 66 44 chr2 165081406 165081748 -85606106 - L1MEc LINE L1 -5452 667 271 318 310 65 50 chr2 165081755 165081955 -85605899 - L1MEc LINE L1 -5906 213 11 465 246 88 44 chr2 165082310 165082345 -85605509 - MER113 DNA MER1_type? -163 358 326 2649 93 0 3 chr2 165082345 165082701 -85605153 - THE1A LTR MaLR 0 355 1 465 246 88 44 chr2 165082701 165082937 -85604917 - MER113 DNA MER1_type? -195 326 75 230 128 0 85 chr2 165083962 165084009 -85603845 + MIR SINE MIR 109 151 -111 313 122 0 0 chr2 165084045 165084094 -85603760 - MADE1 DNA Mariner 0 80 32 217 196 0 22 chr2 165085576 165085622 -85602232 + (TA)n Simple_repeat Simple_repeat 1 45 0 1856 161 0 0 chr2 165085708 165086007 -85601847 + AluSx SINE Alu 1 299 -13 715 279 61 18 chr2 165086347 165086576 -85601278 - MER57-int LTR ERV1 -685 6852 6614 4361 222 64 79 chr2 165086667 165087593 -85600261 - MER57-int LTR ERV1 -697 5094 4156 2324 45 3 14 chr2 165087593 165087899 -85599955 - AluY SINE Alu 0 303 1 4361 222 64 79 chr2 165087899 165088081 -85599773 - MER57-int LTR ERV1 -1635 4156 3973 210 105 0 0 chr2 165088081 165088119 -85599735 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 4361 222 64 79 chr2 165088119 165088607 -85599247 - MER57-int LTR ERV1 -1818 3973 3479 2408 64 0 3 chr2 165088607 165088903 -85598951 - AluSg SINE Alu -15 295 1 4361 222 64 79 chr2 165088903 165089226 -85598628 - MER57-int LTR ERV1 -2312 3479 2493 1440 223 3 10 chr2 165089230 165089521 -85598333 + AluJb SINE Alu 1 289 -23 246 268 52 21 chr2 165089787 165089884 -85597970 + MIR SINE MIR 67 166 -96 355 324 9 0 chr2 165089930 165090038 -85597816 - MLT1I LTR MaLR -300 109 1 323 320 0 0 chr2 165090038 165090141 -85597713 + MIR SINE MIR 160 262 0 231 246 49 0 chr2 165090479 165090540 -85597314 + MER94 DNA DNA 18 81 -53 360 357 70 7 chr2 165090809 165090952 -85596902 + L2 LINE L2 3121 3272 0 202 326 30 53 chr2 165091477 165091609 -85596245 + L2 LINE L2 2611 2739 -575 29 47 0 0 chr2 165091618 165091661 -85596193 + AT_rich Low_complexity Low_complexity 1 43 0 184 233 35 70 chr2 165091676 165091762 -85596092 - L3 LINE CR1 -196 1381 1299 336 342 75 0 chr2 165092845 165092965 -85594889 + MIR3 SINE MIR 40 168 -40 207 294 132 37 chr2 165093316 165093452 -85594402 - MER5A DNA MER1_type -24 165 17 527 313 116 11 chr2 165093539 165093814 -85594040 - MER102b DNA MER1_type 0 341 38 228 128 26 0 chr2 165095331 165095370 -85592484 - L2 LINE L2 0 3313 3274 258 297 82 51 chr2 165095555 165095645 -85592209 - L1MC4a LINE L1 -1875 5933 5847 1750 154 0 67 chr2 165095645 165095799 -85592055 + AluJo SINE Alu 1 123 -189 2272 97 0 0 chr2 165095799 165096089 -85591765 + AluY SINE Alu 4 293 -18 1750 154 0 67 chr2 165096089 165096264 -85591590 + AluJo SINE Alu 123 308 -4 2042 141 3 0 chr2 165096270 165096561 -85591293 + AluSx SINE Alu 1 292 -20 258 297 82 51 chr2 165096561 165096719 -85591135 - L1MC4a LINE L1 -1965 5843 5670 185 154 26 0 chr2 165097107 165097146 -85590708 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 265 310 103 0 chr2 165098169 165098256 -85589598 - MIR3 SINE MIR -104 104 9 310 413 75 0 chr2 165099174 165099334 -85588520 + L2 LINE L2 3101 3272 0 21 0 0 0 chr2 165099530 165099551 -85588303 + AT_rich Low_complexity Low_complexity 1 21 0 408 256 183 0 chr2 165101657 165101794 -85586060 - MIR SINE MIR -40 222 61 235 325 0 0 chr2 165102671 165102754 -85585100 + (TATATG)n Simple_repeat Simple_repeat 5 87 0 387 329 113 18 chr2 165102804 165103026 -85584828 + MIR SINE MIR 20 262 0 180 152 30 0 chr2 165103031 165103064 -85584790 + L2 LINE L2 3265 3298 -15 221 304 65 22 chr2 165103403 165103495 -85584359 + MIR3 SINE MIR 85 180 -28 1221 40 14 0 chr2 165103691 165103839 -85584015 - AluY SINE Alu -18 293 144 186 382 13 0 chr2 165104740 165104816 -85583038 + MIR3 SINE MIR 117 193 -15 379 285 41 0 chr2 165104877 165105000 -85582854 + MIR3 SINE MIR 75 202 -6 199 372 23 0 chr2 165105592 165105678 -85582176 - MIR SINE MIR 0 262 175 356 232 79 49 chr2 165105976 165106140 -85581714 - L1MC5 LINE L1 -175 7786 7618 300 219 10 10 chr2 165106144 165106240 -85581614 + L1ME3A LINE L1 2902 2997 -3149 739 245 82 106 chr2 165106243 165106949 -85580905 + L1ME3A LINE L1 3846 4534 -1612 243 0 0 0 chr2 165107040 165107067 -85580787 + (TG)n Simple_repeat Simple_repeat 2 28 0 1678 267 21 15 chr2 165107334 165107813 -85580041 + L1ME3A LINE L1 5655 6136 -34 883 263 82 23 chr2 165107853 165108290 -85579564 + HAL1 LINE L1 1272 1734 -773 461 317 111 29 chr2 165108300 165108838 -85579016 + MLT1G1 LTR MaLR 14 555 0 373 220 119 0 chr2 165109318 165109427 -85578427 + HAL1 LINE L1 2306 2427 -80 348 83 0 0 chr2 165114036 165114084 -85573770 + (TA)n Simple_repeat Simple_repeat 2 49 0 250 313 83 0 chr2 165114856 165114952 -85572902 - MIR SINE MIR -50 212 109 1873 249 119 28 chr2 165116094 165116489 -85571365 - Charlie7 DNA MER1_type -12 2600 2243 2251 102 0 0 chr2 165116489 165116782 -85571072 - AluSx SINE Alu -19 293 1 1873 249 119 28 chr2 165116782 165117128 -85570726 - Charlie7 DNA MER1_type -369 2243 1930 2395 140 65 2 chr2 165117128 165117529 -85570325 + MSTA LTR MaLR 1 426 -2 1873 249 119 28 chr2 165117529 165117804 -85570050 - Charlie7 DNA MER1_type -682 1930 1490 318 263 166 14 chr2 165117847 165118064 -85569790 - Charlie7 DNA MER1_type -2293 319 70 240 250 143 27 chr2 165118556 165118668 -85569186 + HAL1 LINE L1 2380 2504 -3 813 276 57 12 chr2 165118672 165118918 -85568936 - MIR SINE MIR -3 259 3 2839 241 291 37 chr2 165119031 165121396 -85566458 + L1M3e LINE L1 460 3394 -4172 1282 148 59 35 chr2 165121423 165121679 -85566175 + Tigger2a DNA MER2_type 1 262 -172 5450 224 38 11 chr2 165121696 165123340 -85564514 + L1M3e LINE L1 3313 5004 -2561 2422 48 3 0 chr2 165123334 165123629 -85564225 - L1PA7 LINE L1 -496 5658 5363 * 3633 77 8 2 chr2 165123629 165124136 -85563718 + L1PA7 LINE L1 5642 6158 0 3460 164 18 0 chr2 165124222 165124838 -85563016 + L1M3e LINE L1 4971 5597 -1968 2127 113 0 3 chr2 165125036 165125345 -85562509 - AluSg SINE Alu -2 308 1 1534 224 55 48 chr2 165125345 165125672 -85562182 - MER57-int LTR ERV1 -1697 4901 4578 1508 220 3 10 chr2 165125672 165125976 -85561878 + AluJb SINE Alu 1 302 -10 1534 224 55 48 chr2 165125976 165126274 -85561580 - MER57-int LTR ERV1 -2020 4578 2409 882 199 6 0 chr2 165126286 165126442 -85561412 + AluJo SINE Alu 127 283 -29 284 271 28 57 chr2 165126459 165126636 -85561218 - MER57-int LTR ERV1 -3231 1892 1721 925 217 87 74 chr2 165126733 165127293 -85560561 - MER57-int LTR ERV1 -3416 2293 1095 520 113 0 12 chr2 165127472 165127552 -85560302 + MER54A LTR ERVL 7 85 -816 507 188 0 0 chr2 165127543 165127628 -85560226 + MER54A LTR ERVL 256 340 -561 * 2004 123 3 23 chr2 165127644 165127945 -85559909 + AluSg SINE Alu 1 295 -15 397 218 57 32 chr2 165127954 165128078 -85559776 - MER57-int LTR ERV1 -3654 2677 2551 762 215 0 86 chr2 165128157 165128390 -85559464 - MER57-int LTR ERV1 -6708 829 617 260 208 0 0 chr2 165128416 165128469 -85559385 - MER57-int LTR ERV1 -6919 618 566 1281 213 38 35 chr2 165128759 165129073 -85558781 - L1MC3 LINE L1 -1181 6604 6290 1470 184 111 55 chr2 165129075 165129472 -85558382 + L1MC3 LINE L1 6588 7006 -779 1717 120 10 50 chr2 165129499 165129798 -85558056 + MER51A LTR ERV1 348 634 0 281 283 38 0 chr2 165129876 165129982 -85557872 + L1 LINE L1 4934 5043 -1103 261 57 0 0 chr2 165130701 165130736 -85557118 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5517 173 64 13 chr2 165132608 165133775 -85554079 + Tigger3b DNA MER2_type 1 1227 -4 5368 193 61 32 chr2 165133782 165134711 -85553143 - L1MCa LINE L1 -5114 1312 336 2140 125 112 20 chr2 165134711 165135103 -85552751 - MSTA LTR MaLR 0 428 1 5368 193 61 32 chr2 165135103 165135440 -85552414 - L1MCa LINE L1 -6090 336 10 186 118 0 0 chr2 165135746 165135780 -85552074 + (CA)n Simple_repeat Simple_repeat 1 34 0 512 220 66 25 chr2 165136502 165136743 -85551111 - L1M4 LINE L1 -3657 2489 2239 225 174 22 0 chr2 165137980 165138026 -85549828 + L1MC3 LINE L1 5923 5969 -1816 21 0 0 0 chr2 165138235 165138256 -85549598 + AT_rich Low_complexity Low_complexity 1 21 0 2543 40 0 0 chr2 165138698 165138999 -85548855 + AluY SINE Alu 1 301 -10 2323 102 0 10 chr2 165140260 165140574 -85547280 + AluY SINE Alu 1 311 0 334 265 26 17 chr2 165140879 165140996 -85546858 + L1MDb LINE L1 1106 1223 -5186 203 239 0 0 chr2 165142098 165142144 -85545710 + GA-rich Low_complexity Low_complexity 1 46 0 2073 168 15 3 chr2 165142729 165143068 -85544786 - MER61A LTR ERV1 0 343 1 6029 117 35 1 chr2 165143068 165143975 -85543879 - MER61A-int LTR ERV1 0 5217 4280 6543 166 55 24 chr2 165143975 165145174 -85542680 - MER61A-int LTR ERV1 -1101 6066 4905 3269 108 10 19 chr2 165145174 165145690 -85542164 + MER9 LTR ERVK 1 511 0 6543 166 55 24 chr2 165145690 165147758 -85540096 - MER61A-int LTR ERV1 -2262 4905 1 1956 175 12 12 chr2 165147758 165148101 -85539753 - MER61A LTR ERV1 0 343 1 189 0 0 0 chr2 165148337 165148358 -85539496 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 261 0 0 0 chr2 165148357 165148386 -85539468 + (CA)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr2 165149182 165149205 -85538649 + AT_rich Low_complexity Low_complexity 1 23 0 248 284 37 0 chr2 165150573 165150654 -85537200 - MER103 DNA DNA -47 119 36 255 288 76 8 chr2 165151742 165151860 -85535994 - MER103 DNA DNA -5 161 36 959 194 33 0 chr2 165152310 165152490 -85535364 - MER5A DNA MER1_type -3 186 1 977 305 91 7 chr2 165152875 165153305 -85534549 - HsTC2 DNA Tc2 -1086 812 347 3529 157 19 3 chr2 165153438 165154032 -85533822 + LTR26 LTR ERV1 1 603 0 269 309 113 0 chr2 165154704 165154801 -85533053 - MIR3 SINE MIR -30 178 71 218 157 216 0 chr2 165155542 165155593 -85532261 - L2 LINE L2 -1 3312 3251 588 247 53 99 chr2 165155705 165155948 -85531906 - MIR SINE MIR 0 262 31 1244 218 109 7 chr2 165156148 165156560 -85531294 - Charlie4a DNA MER1_type -1 507 54 2059 138 0 0 chr2 165159916 165160212 -85527642 - AluSx SINE Alu -16 296 1 1671 201 94 3 chr2 165160261 165160624 -85527230 - MSTD LTR MaLR 0 396 1 563 153 20 10 chr2 165160664 165160762 -85527092 - Tigger7 DNA MER2_type 0 2491 2393 * 1348 224 15 8 chr2 165160760 165161024 -85526830 - Tigger7 DNA MER2_type -284 266 1 267 259 109 34 chr2 165162845 165162992 -85524862 + L1MC4a LINE L1 7161 7318 -490 180 286 20 0 chr2 165163027 165163076 -85524778 + MIR SINE MIR 101 150 -58 735 241 120 81 chr2 165164745 165165127 -85522727 - MER61A LTR ERV1 -2 401 5 417 225 45 36 chr2 165165148 165165259 -85522595 - MIR SINE MIR -150 112 1 24 53 0 0 chr2 165165849 165165887 -85521967 + AT_rich Low_complexity Low_complexity 1 38 0 444 154 18 9 chr2 165166042 165166152 -85521702 + (TA)n Simple_repeat Simple_repeat 1 111 0 1321 237 148 15 chr2 165166583 165167043 -85520811 + L1ME4a LINE L1 29 549 -5877 416 329 15 0 chr2 165167166 165167303 -85520551 + MIR SINE MIR 111 249 -13 638 316 42 50 chr2 165167629 165168109 -85519745 + L1ME4a LINE L1 378 853 -5563 210 37 0 0 chr2 165168226 165168253 -85519601 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 863 287 106 45 chr2 165168289 165168801 -85519053 + L1ME2 LINE L1 1 543 -5527 31 0 0 0 chr2 165168954 165168985 -85518869 + AT_rich Low_complexity Low_complexity 1 31 0 458 241 91 32 chr2 165169003 165169256 -85518598 + L1ME2 LINE L1 579 846 -5224 * 1374 261 107 14 chr2 165169249 165169880 -85517974 + L1ME2 LINE L1 5205 5946 -152 2407 132 51 14 chr2 165169880 165170312 -85517542 - MER83 LTR ERV1 0 448 1 1374 261 107 14 chr2 165170312 165170481 -85517373 + L1ME2 LINE L1 5946 6098 0 380 376 102 45 chr2 165170800 165171220 -85516634 + L2 LINE L2 2812 3255 -17 207 214 18 18 chr2 165171233 165171289 -85516565 + (TGAA)n Simple_repeat Simple_repeat 3 58 0 23 33 0 0 chr2 165171816 165171846 -85516008 + AT_rich Low_complexity Low_complexity 1 30 0 315 0 0 0 chr2 165172094 165172129 -85515725 + (TG)n Simple_repeat Simple_repeat 2 36 0 305 237 17 17 chr2 165172148 165172266 -85515588 + L1ME4a LINE L1 1506 6325 -5 309 26 0 0 chr2 165172778 165172816 -85515038 + (TA)n Simple_repeat Simple_repeat 2 39 0 796 193 7 0 chr2 165172816 165172961 -85514893 - AluJb SINE Alu -10 302 157 703 303 73 28 chr2 165173844 165174524 -85513330 - L1ME LINE L1 -4845 1235 525 322 283 136 68 chr2 165174827 165175263 -85512591 - L1ME LINE L1 -5557 513 42 1388 145 0 0 chr2 165175782 165175989 -85511865 + THE1-int LTR MaLR 1183 1389 -191 2803 122 28 30 chr2 165177096 165177555 -85510299 - MER4C LTR ERV1 -7 458 1 1682 163 82 18 chr2 165177634 165177977 -85509877 + MLT1A1 LTR MaLR 1 365 0 184 389 51 17 chr2 165178196 165178371 -85509483 - MIR3 SINE MIR -7 201 21 1746 266 47 49 chr2 165179321 165179365 -85508489 + L1MC4a LINE L1 5257 5300 -2508 2352 77 3 0 chr2 165179365 165179662 -85508192 + AluSg SINE Alu 2 299 -11 1746 266 47 49 chr2 165179662 165180435 -85507419 + L1MC4a LINE L1 5300 6072 -1736 314 335 17 6 chr2 165180726 165180899 -85506955 + L1MC4a LINE L1 6378 6552 -1256 2167 103 0 13 chr2 165180899 165181199 -85506655 + AluSg SINE Alu 1 296 -14 405 248 0 68 chr2 165181662 165181779 -85506075 - MER94 DNA DNA -1 133 25 483 315 35 7 chr2 165181840 165182020 -85505834 - MIR SINE MIR -21 187 3 24 32 0 0 chr2 165182834 165182865 -85504989 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 165184518 165184541 -85503313 + AT_rich Low_complexity Low_complexity 1 23 0 180 111 0 0 chr2 165185161 165185188 -85502666 + (CATA)n Simple_repeat Simple_repeat 1 27 0 30 59 0 0 chr2 165185211 165185262 -85502592 + AT_rich Low_complexity Low_complexity 1 51 0 519 252 103 34 chr2 165185591 165185614 -85502240 + MER112 DNA MER1_type 10 30 -230 1986 200 58 11 chr2 165185614 165186060 -85501794 + MLT1C LTR MaLR 1 467 0 519 252 103 34 chr2 165186060 165186270 -85501584 + MER112 DNA MER1_type 30 259 -1 278 267 20 30 chr2 165186821 165186922 -85500932 - MLT1G1 LTR MaLR -13 582 483 206 311 0 22 chr2 165188396 165188486 -85499368 + A-rich Low_complexity Low_complexity 2 89 0 1133 314 90 11 chr2 165188764 165189731 -85498123 + L1ME3A LINE L1 2145 3146 -3069 1708 158 40 0 chr2 165189757 165190124 -85497730 + AluY SINE Alu 1 378 0 311 277 183 0 chr2 165190124 165190261 -85497593 + L1ME3A LINE L1 3814 3975 -2240 429 314 20 20 chr2 165190328 165190573 -85497281 + L1ME3A LINE L1 4992 5236 -979 1750 234 137 36 chr2 165190729 165191554 -85496300 + L1ME3A LINE L1 5323 6230 -9 323 284 30 71 chr2 165191695 165191864 -85495990 - MIR SINE MIR -21 241 80 23 33 0 0 chr2 165193085 165193115 -85494739 + AT_rich Low_complexity Low_complexity 1 30 0 439 239 0 18 chr2 165193468 165193581 -85494273 + MIR SINE MIR 152 262 0 188 326 0 0 chr2 165193790 165193839 -85494015 - L2 LINE L2 -15 3298 3250 250 333 73 13 chr2 165194921 165195071 -85492783 - L2 LINE L2 0 3313 3155 203 373 86 38 chr2 165195345 165195554 -85492300 - L2 LINE L2 -482 2832 2614 369 357 20 20 chr2 165195788 165195987 -85491867 - MIR SINE MIR -60 202 4 223 250 188 0 chr2 165196003 165196083 -85491771 - L2 LINE L2 -952 2362 2268 250 389 28 9 chr2 165196295 165196403 -85491451 + L2 LINE L2 2990 3099 -173 551 278 85 22 chr2 165196822 165197045 -85490809 + MIR SINE MIR 2 238 -24 180 111 0 0 chr2 165197055 165197082 -85490772 + (CTG)n Simple_repeat Simple_repeat 3 29 0 306 175 0 0 chr2 165197399 165197411 -85490443 + L1MC3 LINE L1 7041 7052 -733 270 0 0 0 chr2 165197411 165197441 -85490413 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 306 175 0 0 chr2 165197441 165197485 -85490369 + L1MC3 LINE L1 7051 7097 -688 328 320 0 0 chr2 165197485 165197582 -85490272 + MLT1F1 LTR MaLR 35 131 -436 3054 170 24 5 chr2 165197584 165198165 -85489689 + L1MC3 LINE L1 7194 7785 0 1093 187 10 0 chr2 165198161 165198370 -85489484 + L1MC3 LINE L1 7575 7785 0 * 398 243 19 39 chr2 165200003 165200106 -85487748 - MIR SINE MIR -78 130 30 2881 195 12 28 chr2 165200244 165200764 -85487090 + MLT2B3 LTR ERVL 1 528 -26 549 30 0 0 chr2 165200764 165200831 -85487023 + (TC)n Simple_repeat Simple_repeat 2 68 0 297 0 0 0 chr2 165200830 165200863 -85486991 + (TA)n Simple_repeat Simple_repeat 1 33 0 * 2881 195 12 28 chr2 165200831 165200905 -85486949 + MLT2B3 LTR ERVL 528 554 0 716 266 14 14 chr2 165201109 165201323 -85486531 - LTR33 LTR ERVL -3 518 305 603 325 81 0 chr2 165202663 165202897 -85484957 - MIR SINE MIR -9 253 1 781 288 103 23 chr2 165203399 165203788 -85484066 - MLT1J1 LTR MaLR -11 435 16 224 361 48 12 chr2 165203823 165203906 -85483948 - L2 LINE L2 -44 3228 3143 422 283 185 6 chr2 165203957 165204130 -85483724 - MIR SINE MIR -39 223 20 247 290 50 0 chr2 165204647 165204747 -85483107 + MIR SINE MIR 36 140 -122 246 322 0 0 chr2 165206452 165206511 -85481343 - MER91A DNA MER1_type 0 190 132 440 357 32 13 chr2 165206549 165206706 -85481148 - MER91A DNA MER1_type -35 161 2 236 188 115 21 chr2 165207247 165207343 -85480511 - L1ME4a LINE L1 -9 6112 6008 24 32 0 0 chr2 165208650 165208681 -85479173 + AT_rich Low_complexity Low_complexity 1 31 0 496 315 35 7 chr2 165209495 165209675 -85478179 + MIR SINE MIR 3 187 -21 405 248 0 68 chr2 165209736 165209853 -85478001 + MER94 DNA DNA 25 133 -1 25 51 0 0 chr2 165210431 165210470 -85477384 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 165211038 165211059 -85476795 + AT_rich Low_complexity Low_complexity 1 21 0 958 291 72 42 chr2 165211250 165211697 -85476157 + LTR16B LTR ERVL 5 464 0 225 0 0 0 chr2 165211921 165211946 -85475908 + (TG)n Simple_repeat Simple_repeat 2 26 0 253 273 43 122 chr2 165212703 165212842 -85475012 + MIR3 SINE MIR 55 182 -26 21 0 0 0 chr2 165215518 165215539 -85472315 + AT_rich Low_complexity Low_complexity 1 21 0 471 228 82 54 chr2 165215539 165215723 -85472131 - L1MC5 LINE L1 -48 7913 7725 328 337 49 54 chr2 165216241 165216425 -85471429 - MIR SINE MIR -57 151 20 23 0 0 0 chr2 165216546 165216569 -85471285 + AT_rich Low_complexity Low_complexity 1 23 0 1802 158 53 0 chr2 165217459 165217579 -85470275 + AluSx SINE Alu 1 113 -199 438 20 0 0 chr2 165217579 165217630 -85470224 + (CA)n Simple_repeat Simple_repeat 2 52 0 1802 158 53 0 chr2 165217630 165217793 -85470061 + AluSx SINE Alu 113 299 -13 420 134 67 0 chr2 165218169 165218303 -85469551 + (TA)n Simple_repeat Simple_repeat 1 143 0 209 154 39 0 chr2 165219633 165219685 -85468169 + T-rich Low_complexity Low_complexity 1 54 0 186 71 0 0 chr2 165220117 165220145 -85467709 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 540 360 35 26 chr2 165220271 165220582 -85467272 - L3 LINE CR1 -1 1576 1263 243 274 14 0 chr2 165222116 165222189 -85465665 + MER116 DNA Mariner 1 74 -6 318 364 16 8 chr2 165222227 165222356 -85465498 + MER5A DNA MER1_type 57 186 -3 477 298 157 28 chr2 165223686 165223867 -85463987 + L2 LINE L2 2530 2686 -627 279 0 0 0 chr2 165223867 165223898 -85463956 + (CA)n Simple_repeat Simple_repeat 1 31 0 477 298 157 28 chr2 165223898 165224203 -85463651 + L2 LINE L2 2686 3125 -188 5161 134 48 10 chr2 165224933 165226944 -85460910 + L1PA16 LINE L1 4110 6166 0 25 31 0 0 chr2 165226958 165226990 -85460864 + AT_rich Low_complexity Low_complexity 1 32 0 2391 74 0 3 chr2 165227033 165227331 -85460523 - AluY SINE Alu -14 297 1 243 208 19 0 chr2 165227423 165227476 -85460378 + (CATATA)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr2 165228064 165228085 -85459769 + AT_rich Low_complexity Low_complexity 1 21 0 234 319 77 11 chr2 165228447 165228538 -85459316 - L2 LINE L2 -12 3260 3164 1851 184 9 11 chr2 165228895 165229243 -85458611 + MER7A DNA MER2_type 2 346 0 6391 74 10 2 chr2 165229592 165231040 -85456814 + L1PA8A LINE L1 4675 6125 -6 252 0 0 0 chr2 165231175 165231203 -85456651 + (TG)n Simple_repeat Simple_repeat 2 29 0 27 29 0 0 chr2 165232954 165232988 -85454866 + AT_rich Low_complexity Low_complexity 1 34 0 683 311 32 9 chr2 165233558 165233777 -85454077 + MIR SINE MIR 15 238 -24 219 170 0 0 chr2 165234127 165234174 -85453680 + T-rich Low_complexity Low_complexity 1 47 0 2098 105 31 0 chr2 165234339 165234633 -85453221 - AluSq SINE Alu -10 303 1 3037 268 57 68 chr2 165235156 165235915 -85451939 + L2 LINE L2 1777 2500 -813 592 98 0 0 chr2 165235915 165235997 -85451857 - L1PA16 LINE L1 -9 6157 6076 3037 268 57 68 chr2 165235997 165236705 -85451149 + L2 LINE L2 2500 3214 -99 562 334 61 2 chr2 165236768 165237010 -85450844 - L1ME LINE L1 -415 5706 5443 26 0 0 0 chr2 165237084 165237110 -85450744 + AT_rich Low_complexity Low_complexity 1 26 0 1426 132 21 113 chr2 165237110 165237436 -85450418 - AluYb8 SINE Alu -22 296 1 2849 3 0 0 chr2 165237438 165237748 -85450106 - AluYa5 SINE Alu -1 310 1 321 289 78 14 chr2 165239302 165239444 -85448410 + L2 LINE L2 3156 3306 -7 1528 105 41 0 chr2 165240616 165240835 -85447019 + MER30 DNA MER1_type 3 230 0 205 259 0 52 chr2 165241086 165241144 -85446710 - L2 LINE L2 -4 3268 3214 316 260 41 48 chr2 165241557 165241703 -85446151 + LTR67 LTR ERVL 398 542 -15 1955 139 0 0 chr2 165241919 165242193 -85445661 + AluSx SINE Alu 1 274 -38 2390 49 3 10 chr2 165242238 165242542 -85445312 + AluY SINE Alu 1 302 -9 10125 223 61 17 chr2 165242562 165243603 -85444251 + L1MC1 LINE L1 28 1022 -5591 919 186 6 6 chr2 165243603 165243780 -85444074 + FRAM SINE Alu 1 176 0 10125 223 61 17 chr2 165243780 165248886 -85438968 + L1MC1 LINE L1 1022 6613 0 23 0 0 0 chr2 165249074 165249097 -85438757 + AT_rich Low_complexity Low_complexity 1 23 0 2068 121 0 0 chr2 165249294 165249610 -85438244 + AluSx SINE Alu 1 316 0 408 298 81 12 chr2 165249873 165250034 -85437820 + MIR SINE MIR 36 207 -55 247 362 87 18 chr2 165250241 165250575 -85437279 + L2 LINE L2 1747 2103 -1211 578 277 90 68 chr2 165250927 165251370 -85436484 - MLT1H LTR MaLR -24 525 1 288 178 41 41 chr2 165251763 165251836 -85436018 + MLT1K LTR MaLR 350 422 -166 1008 314 91 36 chr2 165252333 165253091 -85434763 + L2 LINE L2 2494 3313 0 220 250 0 0 chr2 165253818 165253858 -85433996 + (CACG)n Simple_repeat Simple_repeat 4 43 0 614 242 19 13 chr2 165254356 165254513 -85433341 - MIR SINE MIR -57 205 48 25 31 0 0 chr2 165254685 165254717 -85433137 + AT_rich Low_complexity Low_complexity 1 32 0 453 241 14 48 chr2 165255055 165255194 -85432660 - MIR SINE MIR -67 141 39 824 266 42 13 chr2 165255245 165255544 -85432310 - L2 LINE L2 -447 2867 2492 834 338 113 39 chr2 165255639 165256391 -85431463 - L2 LINE L2 -601 2713 1906 286 275 25 0 chr2 165257661 165257741 -85430113 + GA-rich Low_complexity Low_complexity 3 84 0 366 23 0 0 chr2 165260348 165260391 -85427463 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 537 314 27 21 chr2 165260917 165261323 -85426531 + MLT1K LTR MaLR 136 588 0 752 294 44 12 chr2 165261353 165261605 -85426249 + MIR SINE MIR 3 262 0 248 271 17 0 chr2 165262291 165262350 -85425504 + L2 LINE L2 3211 3270 -2 2101 123 0 0 chr2 165263307 165263609 -85424245 + AluY SINE Alu 1 302 -9 196 191 0 64 chr2 165263992 165264025 -85423829 + MIR SINE MIR 184 213 -49 498 248 19 9 chr2 165264025 165264130 -85423724 + MER5B DNA MER1_type 1 106 -72 415 256 101 59 chr2 165264126 165264345 -85423509 + L2 LINE L2 162 389 -2925 * 514 218 28 42 chr2 165264282 165264424 -85423430 - MER91B DNA MER1_type -13 177 38 1143 271 298 7 chr2 165264444 165265149 -85422705 + L2 LINE L2 334 1243 -2071 980 174 0 0 chr2 165265155 165265310 -85422544 - AluJb SINE Alu -24 288 134 738 289 184 18 chr2 165265311 165265654 -85422200 + L2 LINE L2 1242 1641 -1673 611 241 40 6 chr2 165265686 165265860 -85421994 + L1MC4 LINE L1 7721 7900 -142 200 163 23 0 chr2 165265862 165265905 -85421949 + GA-rich Low_complexity Low_complexity 1 44 0 334 85 0 0 chr2 165265940 165265987 -85421867 - MLT2B2 LTR ERVL -8 507 461 251 258 129 30 chr2 165266618 165266750 -85421104 - MER117 DNA MER1_type 0 197 53 420 237 70 64 chr2 165266972 165267128 -85420726 - MIR3 SINE MIR -21 187 31 187 219 57 0 chr2 165267223 165267328 -85420526 + GA-rich Low_complexity Low_complexity 5 115 0 369 0 0 0 chr2 165269212 165269253 -85418601 + (TG)n Simple_repeat Simple_repeat 2 42 0 1857 152 3 7 chr2 165270136 165270432 -85417422 - AluSx SINE Alu -17 295 1 21 95 0 0 chr2 165270580 165270643 -85417211 + AT_rich Low_complexity Low_complexity 1 63 0 1673 167 27 38 chr2 165270676 165271041 -85416813 + MLT1A1 LTR MaLR 5 365 0 331 303 17 8 chr2 165271041 165271160 -85416694 - L2 LINE L2 -42 3271 3152 396 0 0 0 chr2 165273077 165273121 -85414733 + (TG)n Simple_repeat Simple_repeat 2 45 0 641 317 53 12 chr2 165273830 165274073 -85413781 - MIR SINE MIR 0 262 10 23 0 0 0 chr2 165274677 165274700 -85413154 + AT_rich Low_complexity Low_complexity 1 23 0 287 252 144 27 chr2 165275367 165275478 -85412376 + MIR SINE MIR 89 212 -50 259 291 23 23 chr2 165275534 165275620 -85412234 + L2 LINE L2 3185 3270 -2 446 0 19 0 chr2 165275655 165275709 -85412145 + (TTTTA)n Simple_repeat Simple_repeat 1 55 0 558 258 12 68 chr2 165276357 165276520 -85411334 + MER96 DNA MER1_type? 8 161 -14 2117 133 0 0 chr2 165276798 165277100 -85410754 + AluSg SINE Alu 2 303 -7 293 311 136 14 chr2 165277321 165277731 -85410123 + L1M4c LINE L1 1174 1577 -4805 2881 217 15 31 chr2 165277732 165278446 -85409408 - Cheshire DNA MER1_type -1654 766 64 242 247 12 12 chr2 165279219 165279382 -85408472 + GA-rich Low_complexity Low_complexity 1 163 0 777 132 0 137 chr2 165279779 165279983 -85407871 - L1MA10 LINE L1 -10 6324 6149 1100 213 130 108 chr2 165280192 165280722 -85407132 + MLT1F LTR MaLR 1 542 0 25 0 0 0 chr2 165282522 165282547 -85405307 + AT_rich Low_complexity Low_complexity 1 25 0 450 36 0 0 chr2 165282584 165282640 -85405214 + (CA)n Simple_repeat Simple_repeat 1 56 0 180 77 0 0 chr2 165282640 165282666 -85405188 + (GA)n Simple_repeat Simple_repeat 1 26 0 264 174 0 0 chr2 165282674 165282720 -85405134 + MADE1 DNA Mariner 35 80 0 357 371 129 22 chr2 165282880 165283564 -85404290 - L2 LINE L2 -338 2976 2220 202 241 35 0 chr2 165284480 165284538 -85403316 + GA-rich Low_complexity Low_complexity 5 64 0 21 36 0 0 chr2 165284731 165284759 -85403095 + AT_rich Low_complexity Low_complexity 1 28 0 185 219 0 16 chr2 165286218 165286282 -85401572 + CT-rich Low_complexity Low_complexity 2 64 0 1850 130 11 0 chr2 165286953 165287215 -85400639 - AluSp SINE Alu -45 268 4 1211 199 75 53 chr2 165288110 165288392 -85399462 + AluJo SINE Alu 6 293 -19 195 220 0 0 chr2 165289316 165289366 -85398488 + (CA)n Simple_repeat Simple_repeat 2 51 0 2048 130 0 3 chr2 165289396 165289688 -85398166 + AluSx SINE Alu 1 291 -21 447 78 0 0 chr2 165289688 165289752 -85398102 + (GGGGA)n Simple_repeat Simple_repeat 1 64 0 642 21 21 21 chr2 165289753 165289846 -85398008 + (GAAA)n Simple_repeat Simple_repeat 4 96 0 660 291 64 30 chr2 165289861 165290095 -85397759 + MIR SINE MIR 8 249 -13 256 326 23 0 chr2 165290331 165290417 -85397437 + MIR SINE MIR 61 148 -60 5048 66 158 6 chr2 165291287 165292004 -85395850 + LTR12 LTR ERV1 1 826 0 207 69 0 0 chr2 165292117 165292146 -85395708 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2081 116 0 0 chr2 165292150 165292426 -85395428 - AluSg SINE Alu -34 276 1 292 375 132 0 chr2 165292805 165292949 -85394905 - MER91A DNA MER1_type -16 180 18 23 0 0 0 chr2 165293184 165293207 -85394647 + AT_rich Low_complexity Low_complexity 1 23 0 221 352 88 16 chr2 165295215 165295340 -85392514 - L2 LINE L2 -6 3266 3133 294 29 0 0 chr2 165296490 165296525 -85391329 + (GA)n Simple_repeat Simple_repeat 2 36 0 216 0 0 0 chr2 165300026 165300050 -85387804 + (A)n Simple_repeat Simple_repeat 1 24 0 894 296 128 22 chr2 165300104 165300425 -85387429 - L2 LINE L2 -5 3308 2954 383 350 43 12 chr2 165300930 165301093 -85386761 - MIR3 SINE MIR -18 190 23 197 239 0 0 chr2 165302346 165302392 -85385462 + L2 LINE L2 3268 3313 0 212 161 16 32 chr2 165303353 165303415 -85384439 + (TATAA)n Simple_repeat Simple_repeat 5 65 0 387 0 0 0 chr2 165305187 165305230 -85382624 + (TG)n Simple_repeat Simple_repeat 2 44 0 183 302 32 32 chr2 165306204 165306267 -85381587 + L2 LINE L2 3242 3304 -9 303 28 0 0 chr2 165307172 165307208 -85380646 + (TG)n Simple_repeat Simple_repeat 2 37 0 251 221 12 0 chr2 165307810 165307896 -85379958 + CT-rich Low_complexity Low_complexity 2 88 0 195 100 0 0 chr2 165307899 165307929 -85379925 + (CA)n Simple_repeat Simple_repeat 2 31 0 207 162 0 0 chr2 165308822 165308859 -85378995 + A-rich Low_complexity Low_complexity 1 37 0 26 64 0 0 chr2 165309106 165309153 -85378701 + AT_rich Low_complexity Low_complexity 1 47 0 22 0 0 0 chr2 165309412 165309434 -85378420 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 165311291 165311312 -85376542 + AT_rich Low_complexity Low_complexity 1 21 0 599 294 6 17 chr2 165311986 165312163 -85375691 - MIR3 SINE MIR -16 192 18 361 274 51 44 chr2 165312679 165312873 -85374981 + MIR SINE MIR 1 254 -8 252 86 0 0 chr2 165312874 165312909 -85374945 + (TTA)n Simple_repeat Simple_repeat 1 35 0 419 294 162 17 chr2 165313649 165313871 -85373983 - MIR SINE MIR -6 256 2 189 0 0 0 chr2 165313917 165313938 -85373916 + (CA)n Simple_repeat Simple_repeat 2 22 0 304 337 44 17 chr2 165313988 165314169 -85373685 - L2 LINE L2 -1369 1945 1760 22 0 0 0 chr2 165317804 165317826 -85370028 + AT_rich Low_complexity Low_complexity 1 22 0 731 198 22 44 chr2 165317846 165318028 -85369826 - L1MD2 LINE L1 -39 6320 6143 568 280 45 72 chr2 165318695 165318959 -85368895 - MIR SINE MIR -4 258 2 6212 93 47 13 chr2 165319165 165320212 -85367642 - L1PA13 LINE L1 -3 6160 5095 1862 140 3 25 chr2 165321177 165321462 -85366392 + AluJb SINE Alu 1 279 -33 216 0 0 0 chr2 165321464 165321488 -85366366 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1792 119 0 4 chr2 165322111 165322362 -85365492 + AluSc SINE Alu 44 293 -16 312 183 50 8 chr2 165322672 165322792 -85365062 + (TA)n Simple_repeat Simple_repeat 1 125 0 243 344 74 33 chr2 165323126 165323248 -85364606 + MIR3 SINE MIR 28 154 -54 321 345 68 17 chr2 165323469 165323646 -85364208 - MIR SINE MIR -2 260 75 2035 114 30 0 chr2 165325885 165326059 -85361795 - AluSx SINE Alu -5 307 119 438 20 0 0 chr2 165326059 165326110 -85361744 + (TG)n Simple_repeat Simple_repeat 2 52 0 2035 114 30 0 chr2 165326110 165326232 -85361622 - AluSx SINE Alu -193 119 2 303 315 232 11 chr2 165327280 165327461 -85360393 + MIR SINE MIR 28 248 -14 1112 301 97 93 chr2 165327703 165329289 -85358565 + L2 LINE L2 1331 2922 -392 1027 107 0 29 chr2 165329388 165329528 -85358326 + AluSq/x SINE Alu 1 136 -177 2166 80 0 0 chr2 165329528 165329790 -85358064 + AluSg SINE Alu 1 262 -48 597 291 63 5 chr2 165329806 165329995 -85357859 + MIR SINE MIR 63 262 0 200 246 0 35 chr2 165330229 165330286 -85357568 + L2 LINE L2 2917 2971 -301 2167 113 0 7 chr2 165330802 165331102 -85356752 + AluSx SINE Alu 11 308 -4 686 209 109 109 chr2 165332257 165332587 -85355267 - MLT1K LTR MaLR -34 554 225 272 232 37 37 chr2 165332646 165332728 -85355126 + MIR SINE MIR 4 85 -177 279 322 9 61 chr2 165332732 165332847 -85355007 - MLT1K LTR MaLR -367 221 113 215 390 0 0 chr2 165333025 165333102 -85354752 + L2 LINE L2 3111 3187 -85 1952 131 80 14 chr2 165335969 165336321 -85351533 + THE1C LTR MaLR 1 375 0 617 186 18 9 chr2 165336324 165336437 -85351417 - L2 LINE L2 -5 3308 3195 7463 121 14 3 chr2 165336511 165338403 -85349451 + L1PA10 LINE L1 4068 5974 -194 29501 112 11 58 chr2 165338413 165344873 -85342981 + L1PA7 LINE L1 12 6154 0 1401 106 0 42 chr2 165344873 165345090 -85342764 + L1PA10 LINE L1 5959 6166 -2 5939 144 31 8 chr2 165345946 165347159 -85340695 - L1MA3 LINE L1 -8 6297 5113 236 30 30 0 chr2 165347159 165347192 -85340662 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 5939 144 31 8 chr2 165347192 165347518 -85340336 - L1MA3 LINE L1 -1192 5113 4796 193 0 94 0 chr2 165347518 165347550 -85340304 + T-rich Low_complexity Low_complexity 2 36 0 5939 144 31 8 chr2 165347550 165348124 -85339730 - L1MA3 LINE L1 -1509 4796 4135 346 69 0 26 chr2 165348439 165348506 -85339348 + Alu SINE Alu 261 308 0 1646 111 0 0 chr2 165348514 165348730 -85339124 + AluSx SINE Alu 1 216 -96 37 86 0 0 chr2 165348809 165348902 -85338952 + AT_rich Low_complexity Low_complexity 1 93 0 2447 75 0 0 chr2 165349146 165349441 -85338413 + AluY SINE Alu 1 295 -16 2170 110 14 0 chr2 165349443 165349734 -85338120 + AluSx SINE Alu 1 295 -17 805 284 207 18 chr2 165399742 165400182 -85287672 + MLT1G1 LTR MaLR 73 595 0 603 314 106 36 chr2 165400262 165400689 -85287165 + L2 LINE L2 2770 3233 -80 225 0 0 0 chr2 165400695 165400720 -85287134 + (T)n Simple_repeat Simple_repeat 1 25 0 189 277 231 0 chr2 165400721 165400786 -85287068 + L2 LINE L2 3189 3268 -4 9883 191 34 7 chr2 165400807 165403155 -85284699 - L1PA13 LINE L1 -3 6160 3721 252 0 0 0 chr2 165403155 165403183 -85284671 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 9883 191 34 7 chr2 165403183 165403715 -85284139 - L1PA13 LINE L1 -2442 3721 3205 772 126 0 0 chr2 165403732 165403851 -85284003 + AluY SINE Alu 192 310 -1 1645 199 19 29 chr2 165403864 165403888 -85283966 - L1PA13 LINE L1 -2938 3208 3185 1721 173 17 30 chr2 165403888 165404064 -85283790 - AluSx SINE Alu -14 298 126 381 43 0 0 chr2 165404064 165404111 -85283743 + (TG)n Simple_repeat Simple_repeat 2 48 0 1721 173 17 30 chr2 165404111 165404235 -85283619 - AluSx SINE Alu -186 126 2 1645 199 19 29 chr2 165404235 165404622 -85283232 - L1PA13 LINE L1 -2961 3185 2801 1933 93 0 23 chr2 165404633 165404892 -85282962 - AluY SINE Alu -7 304 52 591 187 8 21 chr2 165405340 165405473 -85282381 + L1M4 LINE L1 5469 5595 -579 * 3679 195 68 74 chr2 165405449 165405615 -85282239 + L1MB4 LINE L1 4892 5057 -1123 234 33 0 4 chr2 165405615 165405662 -85282192 + Alu SINE Alu 263 300 0 3679 195 68 74 chr2 165405662 165405784 -85282070 + L1MB4 LINE L1 5057 5178 -1002 1888 182 0 3 chr2 165405784 165406092 -85281762 - AluSx SINE Alu -5 307 1 3679 195 68 74 chr2 165406092 165407050 -85280804 + L1MB4 LINE L1 5178 6180 0 2283 224 41 29 chr2 165407045 165407702 -85280152 + L1M4 LINE L1 2489 3153 -2993 * 1283 257 59 11 chr2 165408284 165408739 -85279115 - L1ME3A LINE L1 -208 5962 5486 736 25 17 34 chr2 165408775 165408893 -85278961 + (TTTC)n Simple_repeat Simple_repeat 3 118 0 745 246 99 65 chr2 165408895 165409194 -85278660 - L1ME3A LINE L1 -968 5178 4858 1626 157 26 46 chr2 165409194 165409328 -85278526 + AluJb SINE Alu 1 136 -176 2106 124 0 0 chr2 165409328 165409641 -85278213 + AluSx SINE Alu 1 313 0 1626 157 26 46 chr2 165409641 165409811 -85278043 + AluJb SINE Alu 136 300 -12 745 246 99 65 chr2 165409811 165409945 -85277909 - L1ME3A LINE L1 -1288 4858 4730 796 267 6 0 chr2 165409969 165410141 -85277713 - MER45A DNA AcHobo -1 177 5 908 197 22 0 chr2 165410155 165410333 -85277521 + MER58B DNA MER1_type 158 339 -2 229 365 35 0 chr2 165410359 165410474 -85277380 - L2 LINE L2 -213 3059 2941 309 240 10 60 chr2 165412195 165412295 -85275559 - MIR SINE MIR -89 173 79 243 274 293 3 chr2 165412556 165412737 -85275117 - MIR SINE MIR 0 262 31 1242 264 96 74 chr2 165413203 165413500 -85274354 + L2 LINE L2 2204 2493 -820 598 233 8 0 chr2 165413500 165413629 -85274225 - FLAM_A SINE Alu -3 130 1 1242 264 96 74 chr2 165413629 165414346 -85273508 + L2 LINE L2 2493 3303 -10 2601 146 28 12 chr2 165414467 165414974 -85272880 + L1MA7 LINE L1 5777 6291 0 2257 108 7 0 chr2 165415015 165415312 -85272542 + AluSp SINE Alu 1 299 -14 188 283 0 22 chr2 165416023 165416069 -85271785 + MIR SINE MIR 79 123 -139 457 233 17 9 chr2 165416538 165416654 -85271200 + MER5A DNA MER1_type 2 118 -71 426 326 105 22 chr2 165416766 165416937 -85270917 - MER102a DNA MER1_type -1089 328 126 1920 124 44 72 chr2 165416937 165417323 -85270531 + THE1C LTR MaLR 1 375 0 426 326 105 22 chr2 165417323 165417418 -85270436 - MER102a DNA MER1_type -1291 126 40 784 281 34 38 chr2 165417418 165417681 -85270173 - L2 LINE L2 -379 2935 2674 912 293 277 14 chr2 165417827 165418516 -85269338 - L3 LINE CR1 -89 1488 619 418 345 7 0 chr2 165418548 165418693 -85269161 - MER117 DNA MER1_type -33 164 19 1857 147 3 3 chr2 165419010 165419296 -85268558 - AluJb SINE Alu -26 286 1 215 389 28 28 chr2 165419473 165419617 -85268237 - L2 LINE L2 0 3313 3170 1589 185 31 10 chr2 165419634 165419926 -85267928 + AluJo SINE Alu 1 298 -14 26 0 0 0 chr2 165419926 165419952 -85267902 + AT_rich Low_complexity Low_complexity 1 26 0 520 342 123 32 chr2 165420240 165420711 -85267143 - L2 LINE L2 -555 2759 2246 3232 201 65 30 chr2 165421024 165421851 -85266003 - L1MB8 LINE L1 -1 6675 5820 1037 204 47 55 chr2 165421851 165422328 -85265526 - MLT1F1 LTR MaLR 0 567 1 2191 206 98 21 chr2 165422328 165422630 -85265224 - L1MB8 LINE L1 -820 5824 5547 2359 82 3 0 chr2 165422630 165422924 -85264930 - AluY SINE Alu -16 295 1 2191 206 98 21 chr2 165422924 165423275 -85264579 - L1MB8 LINE L1 -1097 5547 5121 3392 244 36 55 chr2 165423280 165424397 -85263457 - L1MB8 LINE L1 -2776 3868 2731 228 67 0 0 chr2 165424397 165424427 -85263427 + (TG)n Simple_repeat Simple_repeat 1 30 0 1262 208 68 4 chr2 165424432 165424696 -85263158 - AluJb SINE Alu -30 282 2 3392 244 36 55 chr2 165424696 165425393 -85262461 - L1MB8 LINE L1 -3917 2727 2101 1421 257 91 60 chr2 165425392 165425996 -85261858 - L1MB8 LINE L1 -4782 1864 1280 * 2221 110 7 0 chr2 165425996 165426287 -85261567 - AluSc SINE Alu -16 293 1 1421 257 91 60 chr2 165426287 165426394 -85261460 - L1MB8 LINE L1 -5366 1280 1178 210 37 0 0 chr2 165426394 165426421 -85261433 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1421 257 91 60 chr2 165426421 165426608 -85261246 - L1MB8 LINE L1 -5468 1178 937 233 243 27 54 chr2 165426728 165426802 -85261052 - L1MB8 LINE L1 -5662 880 809 429 192 0 0 chr2 165427425 165427498 -85260356 + Tigger2 DNA MER2_type 1 73 -2645 911 220 6 17 chr2 165427533 165427710 -85260144 - MER8 DNA MER2_type -64 175 1 1779 184 0 16 chr2 165428651 165428961 -85258893 - AluJb SINE Alu -3 309 5 369 0 0 0 chr2 165429029 165429070 -85258784 + (CA)n Simple_repeat Simple_repeat 2 42 0 2248 91 3 0 chr2 165429082 165429367 -85258487 - AluSq SINE Alu -27 286 1 453 237 0 18 chr2 165429402 165429516 -85258338 + Charlie8 DNA MER1_type 111 222 -2195 188 194 0 0 chr2 165429575 165429606 -85258248 + L3 LINE CR1 1543 1573 -4 512 247 67 36 chr2 165429880 165430074 -85257780 - MIR SINE MIR -14 248 49 27 29 0 0 chr2 165432189 165432223 -85255631 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 165432532 165432560 -85255294 + AT_rich Low_complexity Low_complexity 1 28 0 1068 193 25 41 chr2 165433616 165433685 -85254169 + Charlie1 DNA MER1_type 1 70 -2691 2386 93 0 10 chr2 165433685 165433996 -85253858 - AluSp SINE Alu -5 308 1 1068 193 25 41 chr2 165433996 165434170 -85253684 + Charlie1 DNA MER1_type 70 240 -2521 418 309 58 38 chr2 165434595 165434826 -85253028 - MIR SINE MIR -26 236 4 207 297 83 55 chr2 165435306 165435451 -85252403 - MIR SINE MIR -111 151 3 234 312 80 16 chr2 165436075 165436200 -85251654 - MIR SINE MIR -62 200 68 225 225 155 14 chr2 165436314 165436385 -85251469 - MIR SINE MIR -16 246 166 202 246 15 15 chr2 165438040 165438105 -85249749 + CT-rich Low_complexity Low_complexity 3 67 0 43 56 0 0 chr2 165438645 165438716 -85249138 + AT_rich Low_complexity Low_complexity 1 71 0 207 0 0 0 chr2 165438922 165438945 -85248909 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1295 223 50 43 chr2 165439896 165440332 -85247522 - MLT1C LTR MaLR -9 458 13 784 130 8 0 chr2 165440846 165440969 -85246885 - L1PB4 LINE L1 -3 6153 6030 2171 114 0 3 chr2 165441049 165441346 -85246508 - AluSq SINE Alu -17 296 1 2940 172 44 2 chr2 165442377 165442905 -85244949 + MER44D DNA MER2_type 1 605 0 2031 166 30 0 chr2 165442911 165443242 -85244612 - MER7A DNA MER2_type 0 346 8 423 0 0 0 chr2 165443247 165443294 -85244560 + (TG)n Simple_repeat Simple_repeat 2 48 0 509 152 0 0 chr2 165443890 165443969 -85243885 + MSTA LTR MaLR 299 377 -51 22 0 0 0 chr2 165445201 165445223 -85242631 + AT_rich Low_complexity Low_complexity 1 22 0 33 56 0 0 chr2 165446390 165446444 -85241410 + AT_rich Low_complexity Low_complexity 1 54 0 1752 197 3 3 chr2 165446477 165446968 -85240886 + AluJb SINE Alu 3 493 0 441 106 0 15 chr2 165446968 165447034 -85240820 + (GGGA)n Simple_repeat Simple_repeat 2 66 0 297 336 19 19 chr2 165447529 165447633 -85240221 - MIR SINE MIR -157 105 2 194 171 73 0 chr2 165447708 165447749 -85240105 - MER5A DNA MER1_type -145 44 1 855 286 34 67 chr2 165448350 165448846 -85239008 - MLT1J LTR MaLR -31 480 1 22 0 0 0 chr2 165448896 165448918 -85238936 + AT_rich Low_complexity Low_complexity 1 22 0 536 241 69 0 chr2 165449235 165449380 -85238474 - L2 LINE L2 -1 3312 3158 1825 181 17 64 chr2 165449415 165449802 -85238052 + MLT1B LTR MaLR 1 370 -20 1519 207 41 41 chr2 165449802 165450165 -85237689 + MLT1A1 LTR MaLR 3 365 0 1825 181 17 64 chr2 165450165 165450186 -85237668 + MLT1B LTR MaLR 370 390 0 367 269 160 8 chr2 165450225 165450344 -85237510 - L2 LINE L2 -246 3067 2931 320 321 28 0 chr2 165450801 165450910 -85236944 - MIR SINE MIR -78 184 73 365 166 187 129 chr2 165451007 165451113 -85236741 - MER5A DNA MER1_type 0 189 72 1513 171 16 44 chr2 165451113 165451288 -85236566 - AluJb SINE Alu 0 312 149 233 0 62 0 chr2 165451288 165451320 -85236534 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1513 171 16 44 chr2 165451320 165451465 -85236389 - AluJb SINE Alu -163 149 1 365 166 187 129 chr2 165451465 165451497 -85236357 - MER5A DNA MER1_type -117 72 43 2378 47 0 69 chr2 165451655 165451974 -85235880 - AluY SINE Alu -14 297 1 31 58 0 0 chr2 165452429 165452481 -85235373 + AT_rich Low_complexity Low_complexity 1 52 0 2092 118 6 16 chr2 165453060 165453375 -85234479 - AluSx SINE Alu 0 312 1 2351 87 0 0 chr2 165453752 165454050 -85233804 + AluY SINE Alu 3 300 -11 1544 143 11 19 chr2 165454299 165454565 -85233289 - AluJo SINE Alu -20 292 29 2001 118 47 7 chr2 165455949 165456245 -85231609 + AluSx SINE Alu 1 308 -4 2195 146 69 30 chr2 165456595 165457098 -85230756 + MLT2A2 LTR ERVL 1 554 0 1363 216 53 38 chr2 165457098 165457440 -85230414 - MLT1A1 LTR MaLR -18 347 1 1384 307 96 52 chr2 165457980 165458203 -85229651 - L2 LINE L2 -17 3296 3084 195 42 0 0 chr2 165458203 165458227 -85229627 + (ACATG)n Simple_repeat Simple_repeat 5 28 0 1384 307 96 52 chr2 165458227 165458335 -85229519 - L2 LINE L2 -229 3084 2982 2256 100 0 3 chr2 165458335 165458634 -85229220 + AluSx SINE Alu 1 298 -14 1384 307 96 52 chr2 165458634 165459331 -85228523 - L2 LINE L2 -331 2982 2221 896 275 124 14 chr2 165459397 165459761 -85228093 + LTR33 LTR ERVL 104 507 -14 2423 81 3 0 chr2 165460446 165460756 -85227098 - AluY SINE Alu 0 311 1 1086 347 59 51 chr2 165460954 165461913 -85225941 + HERVL LTR ERVL 1003 1975 -3789 847 209 73 6 chr2 165461913 165462090 -85225764 - MER5A DNA MER1_type 0 189 1 1086 347 59 51 chr2 165462090 165462308 -85225546 + HERVL LTR ERVL 1975 2190 -3574 577 334 70 22 chr2 165462423 165462794 -85225060 + HERVL LTR ERVL 2305 2693 -2961 845 316 37 3 chr2 165462851 165463148 -85224706 + HERVL LTR ERVL 2829 3135 -2629 1106 239 103 8 chr2 165463516 165463779 -85224075 + AluJo SINE Alu 2 289 -13 342 316 52 23 chr2 165463800 165463981 -85223873 + HERVL LTR ERVL 3453 3610 -2044 334 149 0 15 chr2 165464240 165464307 -85223547 - MLT1D LTR MaLR 0 505 440 745 171 0 0 chr2 165464307 165464424 -85223430 + FLAM_C SINE Alu 1 117 -26 234 246 0 31 chr2 165464583 165464648 -85223206 + L2 LINE L2 3237 3299 -14 * 246 304 0 89 chr2 165464631 165464743 -85223111 - L2 LINE L2 0 3313 3212 898 254 38 14 chr2 165464763 165464976 -85222878 - MER58A DNA MER1_type 0 224 7 762 316 121 1 chr2 165464980 165465433 -85222421 - L2 LINE L2 -163 3150 2646 251 274 16 0 chr2 165465810 165465872 -85221982 - L2 LINE L2 -1 3312 3250 2523 54 0 0 chr2 165466098 165466392 -85221462 - AluY SINE Alu -17 294 1 1894 153 6 34 chr2 165467381 165467701 -85220153 + AluJb SINE Alu 1 311 -1 2153 96 3 0 chr2 165467978 165468291 -85219563 + AluSg SINE Alu 1 314 0 412 200 109 9 chr2 165468965 165469075 -85218779 - MIR SINE MIR -50 212 92 25 51 0 0 chr2 165469482 165469521 -85218333 + AT_rich Low_complexity Low_complexity 1 39 0 340 272 117 0 chr2 165469876 165469979 -85217875 - L2 LINE L2 -44 3228 3114 297 337 96 17 chr2 165471118 165471296 -85216558 + MIR SINE MIR 14 205 -57 2309 119 0 0 chr2 165471547 165471859 -85215995 - AluSx SINE Alu 0 312 1 270 346 25 12 chr2 165471943 165472024 -85215830 - MIR SINE MIR -96 112 31 223 241 78 78 chr2 165475545 165475661 -85212193 + MIR SINE MIR 123 238 -24 375 359 163 0 chr2 165475914 165476123 -85211731 + MIR SINE MIR 20 262 0 270 0 0 0 chr2 165476289 165476319 -85211535 + (TG)n Simple_repeat Simple_repeat 2 31 0 1767 181 0 7 chr2 165476470 165476768 -85211086 - AluJb SINE Alu -16 296 1 783 260 12 12 chr2 165478712 165478885 -85208969 + MER5A DNA MER1_type 17 189 0 441 0 0 0 chr2 165480332 165480381 -85207473 + (CA)n Simple_repeat Simple_repeat 1 49 0 351 113 38 0 chr2 165483894 165483974 -85203880 + GA-rich Low_complexity Low_complexity 2 84 0 231 88 0 0 chr2 165484708 165484742 -85203112 + (CA)n Simple_repeat Simple_repeat 2 35 0 27 0 0 0 chr2 165484742 165484769 -85203085 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr2 165486743 165486767 -85201087 + AT_rich Low_complexity Low_complexity 1 24 0 221 228 0 0 chr2 165487381 165487438 -85200416 + (TTTG)n Simple_repeat Simple_repeat 2 58 0 207 100 0 0 chr2 165487542 165487572 -85200282 + (CCA)n Simple_repeat Simple_repeat 2 31 0 243 0 0 0 chr2 165491806 165491833 -85196021 + (TG)n Simple_repeat Simple_repeat 2 28 0 203 0 37 0 chr2 165491863 165491890 -85195964 + (TA)n Simple_repeat Simple_repeat 2 29 0 237 65 0 0 chr2 165491890 165491921 -85195933 + (GA)n Simple_repeat Simple_repeat 1 31 0 413 292 97 27 chr2 165492147 165492332 -85195522 - MIR3 SINE MIR -7 201 4 24 53 0 0 chr2 165493133 165493171 -85194683 + AT_rich Low_complexity Low_complexity 1 38 0 30 27 0 0 chr2 165495802 165495839 -85192015 + AT_rich Low_complexity Low_complexity 1 37 0 474 297 79 55 chr2 165497612 165497942 -85189912 + MER102b DNA MER1_type 2 339 -2 261 0 0 0 chr2 165499965 165499994 -85187860 + (TG)n Simple_repeat Simple_repeat 2 30 0 866 182 38 0 chr2 165501295 165501454 -85186400 + AluSg/x SINE Alu 126 290 -22 35 0 0 0 chr2 165501655 165501690 -85186164 + AT_rich Low_complexity Low_complexity 1 35 0 1926 136 0 11 chr2 165501690 165501977 -85185877 - AluJb SINE Alu -27 285 2 237 65 0 0 chr2 165503792 165503823 -85184031 + (TA)n Simple_repeat Simple_repeat 2 32 0 4271 106 11 8 chr2 165505741 165506374 -85181480 + MER41B LTR ERV1 1 635 0 192 77 0 0 chr2 165506876 165506902 -85180952 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 265 248 116 25 chr2 165507928 165508049 -85179805 - MIR SINE MIR -72 190 59 1647 194 13 16 chr2 165508865 165509175 -85178679 - AluJb SINE Alu -2 310 2 184 339 0 17 chr2 165510647 165510706 -85177148 + L2 LINE L2 3206 3263 -50 2184 131 0 0 chr2 165510776 165511082 -85176772 + AluSq SINE Alu 1 306 -7 629 290 165 44 chr2 165511115 165511522 -85176332 - MER115 DNA AcHobo -74 619 164 180 242 48 0 chr2 165511522 165511584 -85176270 + MIR SINE MIR 144 208 -54 195 329 0 14 chr2 165511625 165511698 -85176156 + L3 LINE CR1 1290 1361 -216 1488 186 37 14 chr2 165511819 165512115 -85175739 + AluJo SINE Alu 1 303 -9 806 207 131 5 chr2 165512197 165512419 -85175435 - MIR SINE MIR 0 262 13 315 326 58 16 chr2 165512662 165512852 -85175002 + L2 LINE L2 2222 2419 -895 336 102 0 0 chr2 165512985 165513034 -85174820 + (TG)n Simple_repeat Simple_repeat 2 50 0 218 343 15 0 chr2 165513794 165513861 -85173993 + L2 LINE L2 3185 3252 -20 1775 188 10 10 chr2 165514196 165514499 -85173355 + AluJb SINE Alu 1 303 -9 202 220 0 0 chr2 165514834 165514884 -85172970 + (TAGA)n Simple_repeat Simple_repeat 2 51 0 1951 78 4 0 chr2 165515194 165515459 -85172395 - AluSp SINE Alu 0 302 37 30 45 0 0 chr2 165515698 165515742 -85172112 + AT_rich Low_complexity Low_complexity 1 44 0 1530 115 0 5 chr2 165515779 165515997 -85171857 + AluSg/x SINE Alu 82 298 -12 22 0 0 0 chr2 165518016 165518038 -85169816 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 165518644 165518672 -85169182 + AT_rich Low_complexity Low_complexity 1 28 0 312 302 12 0 chr2 165520302 165520388 -85167466 - MIR3 SINE MIR -10 198 112 291 323 42 0 chr2 165521553 165521649 -85166205 + L2 LINE L2 3167 3266 -6 4346 190 38 19 chr2 165521649 165522272 -85165582 + L1MB8 LINE L1 4352 4961 -1217 2059 149 0 0 chr2 165522272 165522568 -85165286 + AluSx SINE Alu 4 299 -13 1798 129 77 3 chr2 165522573 165522860 -85164994 + AluSq SINE Alu 2 309 -4 4346 190 38 19 chr2 165522860 165524018 -85163836 + L1MB8 LINE L1 4964 6178 0 251 295 57 25 chr2 165524085 165524207 -85163647 - L2 LINE L2 -353 2960 2835 23 0 0 0 chr2 165525430 165525453 -85162401 + AT_rich Low_complexity Low_complexity 1 23 0 402 318 69 12 chr2 165526379 165526552 -85161302 - MIR3 SINE MIR -15 193 11 205 179 36 18 chr2 165526690 165526746 -85161108 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 208 231 0 51 chr2 165526892 165526970 -85160884 + (CAGAGA)n Simple_repeat Simple_repeat 5 78 0 260 153 167 28 chr2 165528123 165528195 -85159659 + MLT1H1 LTR MaLR 1 82 -460 697 221 182 54 chr2 165528280 165528658 -85159196 + MLT1H1 LTR MaLR 172 553 -2 260 250 39 67 chr2 165528825 165528929 -85158925 - MIR SINE MIR -146 116 16 241 169 48 24 chr2 165529196 165529279 -85158575 + (TA)n Simple_repeat Simple_repeat 2 86 0 1856 67 16 4 chr2 165529298 165529553 -85158301 - L1PA7 LINE L1 -4 6150 5893 2127 104 23 0 chr2 165530083 165530382 -85157472 + AluY SINE Alu 1 306 -5 381 22 0 0 chr2 165531245 165531291 -85156563 + (CA)n Simple_repeat Simple_repeat 2 47 0 1036 245 63 4 chr2 165531889 165532126 -85155728 + MIR SINE MIR 1 251 -11 219 389 0 14 chr2 165532135 165532207 -85155647 - L2 LINE L2 -32 3281 3211 24 0 0 0 chr2 165532251 165532275 -85155579 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr2 165533028 165533058 -85154796 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 165533140 165533169 -85154685 + AT_rich Low_complexity Low_complexity 1 29 0 882 98 116 12 chr2 165533591 165533755 -85154099 + L1MA3 LINE L1 6125 6305 0 291 93 0 0 chr2 165534664 165534707 -85153147 + (CA)n Simple_repeat Simple_repeat 2 44 0 216 0 0 0 chr2 165534706 165534730 -85153124 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 288 0 0 0 chr2 165536402 165536434 -85151420 + (TG)n Simple_repeat Simple_repeat 1 32 0 1010 214 36 5 chr2 165537325 165537545 -85150309 - MSTB LTR MaLR -198 228 2 2008 144 6 6 chr2 165538539 165538851 -85149003 + AluSx SINE Alu 1 312 0 258 105 0 0 chr2 165539374 165539412 -85148442 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 1062 144 0 0 chr2 165539414 165539594 -85148260 + (TA)n Simple_repeat Simple_repeat 1 180 0 1938 141 16 0 chr2 165539598 165539902 -85147952 - AluSq SINE Alu -4 309 1 25 0 0 0 chr2 165539943 165539968 -85147886 + AT_rich Low_complexity Low_complexity 1 25 0 254 264 0 0 chr2 165539970 165540023 -85147831 - AluJ/monomer SINE Alu -14 287 235 362 261 0 22 chr2 165540125 165540217 -85147637 + L1MC4 LINE L1 6614 6703 -1339 356 250 0 22 chr2 165540145 165540237 -85147617 - L1MC4 LINE L1 -1339 6703 6614 * 2403 82 16 0 chr2 165540244 165540548 -85147306 - AluSq SINE Alu -4 309 1 180 0 0 0 chr2 165540598 165540618 -85147236 + (TTA)n Simple_repeat Simple_repeat 2 21 0 844 206 0 0 chr2 165540618 165540764 -85147090 - AluJo/FRAM SINE Alu -16 286 141 1284 148 0 5 chr2 165540767 165540963 -85146891 - AluSq SINE Alu -20 293 99 2808 79 0 0 chr2 165540963 165541318 -85146536 + THE1A LTR MaLR 1 355 0 5005 110 15 5 chr2 165541318 165542053 -85145801 + THE1A-int LTR MaLR 1 742 -838 2550 87 6 14 chr2 165542059 165542417 -85145437 + THE1A LTR MaLR 1 355 0 1009 96 0 34 chr2 165542439 165542585 -85145269 - AluSq/x SINE Alu -171 141 1 1800 96 4 0 chr2 165542690 165542943 -85144911 - AluSp SINE Alu 0 309 56 2242 89 3 3 chr2 165542966 165543273 -85144581 + AluSp SINE Alu 2 308 0 183 275 187 0 chr2 165543351 165543442 -85144412 + MIR SINE MIR 48 155 -107 198 273 136 0 chr2 165545190 165545256 -85142598 + MIR SINE MIR 70 144 -118 308 328 40 57 chr2 165545841 165546018 -85141836 + MIR3 SINE MIR 32 205 -3 188 281 156 62 chr2 165546085 165546181 -85141673 - MIR3 SINE MIR -49 159 55 198 191 0 0 chr2 165546301 165546343 -85141511 + (TA)n Simple_repeat Simple_repeat 1 42 0 502 303 92 92 chr2 165546916 165547296 -85140558 + L2 LINE L2 2893 3272 0 756 252 163 27 chr2 165547565 165547902 -85139952 - L2 LINE L2 -1091 2223 1841 2571 46 0 3 chr2 165548024 165548326 -85139528 + AluY SINE Alu 1 301 -10 189 0 0 0 chr2 165548381 165548402 -85139452 + (TA)n Simple_repeat Simple_repeat 2 22 0 1299 145 0 23 chr2 165548582 165548796 -85139058 - AluJb SINE Alu -17 295 87 529 234 0 0 chr2 165549954 165550078 -85137776 - L1MA7 LINE L1 -6 6285 6162 245 255 0 0 chr2 165551878 165551929 -85135925 + L2 LINE L2 3257 3307 -6 250 282 14 0 chr2 165553035 165553106 -85134748 + L2 LINE L2 3154 3225 -47 301 252 148 0 chr2 165553248 165553363 -85134491 + MIR SINE MIR 116 247 -15 1008 181 33 0 chr2 165554764 165554946 -85132908 + MER5A DNA MER1_type 2 189 0 285 98 0 0 chr2 165555055 165555096 -85132758 + (T)n Simple_repeat Simple_repeat 1 41 0 192 26 53 26 chr2 165555181 165555219 -85132635 + (TA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 165555405 165555428 -85132426 + AT_rich Low_complexity Low_complexity 1 23 0 450 0 0 0 chr2 165555801 165555851 -85132003 + (TA)n Simple_repeat Simple_repeat 2 51 0 945 169 38 22 chr2 165556750 165556934 -85130920 + MER3 DNA MER1_type 23 209 0 1326 181 19 54 chr2 165557323 165557582 -85130272 - L1MC3 LINE L1 -21 7764 7516 2279 112 0 0 chr2 165557582 165557887 -85129967 - AluSx SINE Alu -7 305 1 1326 181 19 54 chr2 165557887 165557941 -85129913 - L1MC3 LINE L1 -269 7516 7462 2289 81 0 10 chr2 165558578 165558875 -85128979 + AluY SINE Alu 1 294 -17 237 384 96 0 chr2 165559236 165559382 -85128472 - MIR3 SINE MIR -8 200 41 555 284 113 9 chr2 165560287 165560509 -85127345 - MIR SINE MIR 0 262 18 190 203 186 0 chr2 165560661 165560720 -85127134 - MIR3 SINE MIR -26 182 113 731 208 0 0 chr2 165560795 165560925 -85126929 + FLAM_C SINE Alu 1 130 -3 207 0 0 0 chr2 165561503 165561526 -85126328 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 284 271 17 0 chr2 165562107 165562166 -85125688 - L2 LINE L2 -5 3267 3208 449 257 10 20 chr2 165562234 165562335 -85125519 + MIR3 SINE MIR 79 178 -30 1104 131 11 6 chr2 165562980 165563156 -85124698 - MER5B DNA MER1_type -1 177 1 1226 125 9 54 chr2 165564134 165564358 -85123496 - AluSq SINE Alu -6 307 94 1034 101 0 0 chr2 165564496 165564625 -85123229 - AluSg SINE Alu -179 131 3 434 336 92 35 chr2 165564842 165565157 -85122697 - L3 LINE CR1 -306 1271 939 301 161 18 0 chr2 165566301 165566357 -85121497 - L1MC4 LINE L1 -1340 6702 6646 234 91 0 0 chr2 165566555 165566588 -85121266 + (CA)n Simple_repeat Simple_repeat 2 34 0 192 171 0 73 chr2 165566692 165566733 -85121121 - L2 LINE L2 -1098 2216 2179 1520 198 35 0 chr2 165568430 165568713 -85119141 + AluJb SINE Alu 1 293 -19 249 57 0 0 chr2 165568716 165568751 -85119103 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 165569016 165569037 -85118817 + AT_rich Low_complexity Low_complexity 1 21 0 180 374 43 0 chr2 165570157 165570272 -85117582 + L3b LINE CR1 1153 1272 -311 414 258 169 54 chr2 165570732 165571027 -85116827 + MER102a DNA MER1_type 2 330 0 26 50 0 0 chr2 165571658 165571698 -85116156 + AT_rich Low_complexity Low_complexity 1 40 0 218 116 23 0 chr2 165572774 165572817 -85115037 + (TG)n Simple_repeat Simple_repeat 2 45 0 204 213 98 16 chr2 165572920 165572981 -85114873 + L2 LINE L2 3169 3234 -38 186 143 0 0 chr2 165573157 165573192 -85114662 + (CA)n Simple_repeat Simple_repeat 2 36 0 474 234 131 0 chr2 165573861 165573998 -85113856 - MER103 DNA DNA -9 157 3 412 295 41 0 chr2 165574079 165574201 -85113653 - MIR3 SINE MIR -1 207 81 637 219 0 8 chr2 165574375 165574494 -85113360 - FLAM_A SINE Alu -15 118 1 523 261 42 0 chr2 165575099 165575218 -85112636 + MER94 DNA DNA 5 128 -6 216 316 237 0 chr2 165575225 165575364 -85112490 + L2 LINE L2 3124 3295 -18 2081 122 0 10 chr2 165575368 165575681 -85112173 + AluSx SINE Alu 1 310 0 227 278 37 83 chr2 165576115 165576177 -85111677 - MIR SINE MIR -56 206 148 1498 208 0 10 chr2 165576177 165576513 -85111341 - AluJo SINE Alu 0 333 1 227 278 37 83 chr2 165576513 165576557 -85111297 - MIR SINE MIR -114 148 104 2067 152 7 0 chr2 165576633 165576943 -85110911 - AluSx SINE Alu 0 312 1 363 309 81 42 chr2 165577189 165577425 -85110429 + MIR SINE MIR 16 260 -2 352 323 24 24 chr2 165577585 165577752 -85110102 + MIR SINE MIR 21 187 -75 200 61 61 0 chr2 165579584 165579617 -85108237 + GA-rich Low_complexity Low_complexity 3 37 0 370 283 109 43 chr2 165580657 165580841 -85107013 + MIR SINE MIR 12 207 -55 693 182 71 29 chr2 165581679 165581849 -85106005 + MER69A DNA AcHobo 1 177 0 27 0 0 0 chr2 165583636 165583663 -85104191 + AT_rich Low_complexity Low_complexity 1 27 0 315 299 46 0 chr2 165584060 165584147 -85103707 + MIR SINE MIR 59 149 -113 357 24 0 0 chr2 165584158 165584200 -85103654 + (TC)n Simple_repeat Simple_repeat 1 42 0 306 0 0 0 chr2 165584199 165584233 -85103621 + (CA)n Simple_repeat Simple_repeat 1 34 0 * 343 292 62 31 chr2 165584921 165585051 -85102803 - MIR3 SINE MIR -11 197 64 26 30 0 0 chr2 165586022 165586055 -85101799 + AT_rich Low_complexity Low_complexity 1 33 0 1565 101 0 40 chr2 165586696 165586923 -85100931 + AluSc SINE Alu 88 305 -4 27 0 0 0 chr2 165587851 165587878 -85099976 + AT_rich Low_complexity Low_complexity 1 27 0 209 189 0 0 chr2 165590546 165590583 -85097271 + (CA)n Simple_repeat Simple_repeat 2 38 0 221 0 35 0 chr2 165592987 165593016 -85094838 + (CA)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr2 165597071 165597093 -85090761 + AT_rich Low_complexity Low_complexity 1 22 0 249 57 0 0 chr2 165598373 165598408 -85089446 + (GA)n Simple_repeat Simple_repeat 2 36 0 186 43 0 0 chr2 165600517 165600540 -85087314 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr2 165600736 165600757 -85087097 + AT_rich Low_complexity Low_complexity 1 21 0 236 239 155 0 chr2 165601921 165601992 -85085862 + L3 LINE CR1 1403 1484 -93 36 53 0 0 chr2 165602391 165602448 -85085406 + AT_rich Low_complexity Low_complexity 1 57 0 2167 63 0 17 chr2 165602450 165602778 -85085076 + AluY SINE Alu 1 323 0 272 318 76 62 chr2 165602811 165603100 -85084754 - L2 LINE L2 -4 3309 3017 356 256 0 108 chr2 165603586 165603715 -85084139 - MIR3 SINE MIR -9 199 85 208 154 103 0 chr2 165603975 165604014 -85083840 + MER5B DNA MER1_type 16 58 -120 27 0 0 0 chr2 165604048 165604075 -85083779 + AT_rich Low_complexity Low_complexity 1 27 0 180 111 0 0 chr2 165604805 165604832 -85083022 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 685 208 39 45 chr2 165608082 165608260 -85079594 + MER45A DNA AcHobo 1 177 -1 213 155 0 42 chr2 165608553 165608624 -85079230 + (TA)n Simple_repeat Simple_repeat 1 68 0 318 26 0 0 chr2 165609858 165609897 -85077957 + (TG)n Simple_repeat Simple_repeat 1 39 0 215 163 0 23 chr2 165613216 165613259 -85074595 + CT-rich Low_complexity Low_complexity 2 43 0 180 0 0 0 chr2 165613301 165613321 -85074533 + (A)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr2 165613916 165613936 -85073918 + (A)n Simple_repeat Simple_repeat 1 20 0 262 279 0 73 chr2 165615472 165615637 -85072217 + G-rich Low_complexity Low_complexity 1 153 0 28 0 0 0 chr2 165615694 165615722 -85072132 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 165615737 165615761 -85072093 + GC_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 165617589 165617610 -85070244 + AT_rich Low_complexity Low_complexity 1 21 0 26 98 0 0 chr2 165619149 165619231 -85068623 + AT_rich Low_complexity Low_complexity 1 82 0 243 88 0 0 chr2 165619455 165619489 -85068365 + (A)n Simple_repeat Simple_repeat 1 34 0 632 218 0 27 chr2 165619999 165620146 -85067708 - FLAM_C SINE Alu 0 143 1 282 116 0 0 chr2 165621422 165621465 -85066389 + (T)n Simple_repeat Simple_repeat 1 43 0 208 256 0 0 chr2 165621504 165621547 -85066307 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 26 50 0 0 chr2 165622852 165622892 -85064962 + AT_rich Low_complexity Low_complexity 1 40 0 1542 150 8 0 chr2 165623318 165623584 -85064270 + L1PA16 LINE L1 5890 6157 -9 338 252 43 9 chr2 165624195 165624310 -85063544 - MLT1L LTR MaLR -4 611 493 350 274 157 15 chr2 165624355 165624552 -85063302 - MLT1L LTR MaLR -239 376 152 22 88 0 0 chr2 165625035 165625092 -85062762 + AT_rich Low_complexity Low_complexity 1 57 0 1515 160 15 8 chr2 165626624 165626892 -85060962 - L1PB4 LINE L1 -13 6143 5874 516 262 91 11 chr2 165627522 165627709 -85060145 - MIR SINE MIR -52 210 9 26 30 0 0 chr2 165628062 165628095 -85059759 + AT_rich Low_complexity Low_complexity 1 33 0 1535 150 11 15 chr2 165628100 165628366 -85059488 - AluJb SINE Alu -10 302 38 293 283 158 20 chr2 165628789 165628941 -85058913 + MER5A DNA MER1_type 8 180 -9 591 15 0 0 chr2 165629048 165629116 -85058738 + (TTCC)n Simple_repeat Simple_repeat 4 71 0 243 125 0 0 chr2 165629150 165629190 -85058664 + (GA)n Simple_repeat Simple_repeat 1 40 0 776 259 0 0 chr2 165630458 165630624 -85057230 - FAM SINE Alu -8 167 2 253 199 15 206 chr2 165632061 165632192 -85055662 + MIR SINE MIR 85 190 -72 491 296 154 18 chr2 165634591 165634811 -85053043 + MIR SINE MIR 10 259 -3 384 209 143 11 chr2 165636634 165636725 -85051129 - MIR3 SINE MIR -1 207 105 437 240 223 11 chr2 165636826 165637001 -85050853 - MIR SINE MIR -26 236 25 1600 145 32 51 chr2 165637673 165637984 -85049870 + AluJo SINE Alu 7 311 -1 499 275 103 34 chr2 165640810 165641043 -85046811 - MIR SINE MIR 0 262 14 235 302 0 0 chr2 165642305 165642358 -85045496 + L2 LINE L2 3251 3303 -10 189 281 18 18 chr2 165642386 165642443 -85045411 + L3 LINE CR1 178 234 -1343 428 336 36 9 chr2 165642452 165642672 -85045182 + MIR SINE MIR 36 261 -1 210 118 0 0 chr2 165642880 165642914 -85044940 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 236 161 49 12 chr2 165642916 165642997 -85044857 + CT-rich Low_complexity Low_complexity 1 84 0 2022 176 80 9 chr2 165643443 165643870 -85043984 - MLT1C LTR MaLR -8 459 3 199 256 0 0 chr2 165643985 165644028 -85043826 - L2 LINE L2 -2 3311 3269 180 329 66 0 chr2 165643995 165644071 -85043783 - MIR SINE MIR -6 256 176 * 653 0 13 0 chr2 165644108 165644185 -85043669 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 260 319 0 0 chr2 165645101 165645173 -85042681 - Charlie8 DNA MER1_type -1 2416 2345 430 200 31 113 chr2 165645522 165645682 -85042172 - MER103 DNA DNA -8 158 12 21 0 0 0 chr2 165647352 165647373 -85040481 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 165648598 165648633 -85039221 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 165650556 165650577 -85037277 + AT_rich Low_complexity Low_complexity 1 21 0 452 110 55 0 chr2 165650879 165650952 -85036902 - MADE1 DNA Mariner 0 80 4 342 0 0 0 chr2 165651482 165651520 -85036334 + (TG)n Simple_repeat Simple_repeat 2 39 0 2065 126 10 0 chr2 165651568 165651739 -85036115 - AluSq SINE Alu -8 305 128 657 0 0 0 chr2 165651739 165651812 -85036042 + (TTTTA)n Simple_repeat Simple_repeat 2 74 0 2065 126 10 0 chr2 165651812 165651942 -85035912 - AluSq SINE Alu -185 128 1 421 308 39 13 chr2 165652496 165652652 -85035202 - MIR SINE MIR -6 256 97 1117 176 32 14 chr2 165652652 165652689 -85035165 + AluJb SINE Alu 84 119 -193 207 0 0 0 chr2 165652689 165652712 -85035142 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 279 0 0 0 chr2 165652713 165652744 -85035110 + (CA)n Simple_repeat Simple_repeat 2 32 0 1117 176 32 14 chr2 165652744 165652920 -85034934 + AluJb SINE Alu 118 303 -9 1990 149 0 3 chr2 165655271 165655566 -85032288 + AluJb SINE Alu 1 294 -18 1673 171 9 50 chr2 165655602 165655924 -85031930 - AluJb SINE Alu -3 309 1 22 0 0 0 chr2 165656036 165656058 -85031796 + AT_rich Low_complexity Low_complexity 1 22 0 325 245 201 0 chr2 165656348 165656487 -85031367 - MIR SINE MIR -6 256 90 1161 294 112 20 chr2 165656922 165657489 -85030365 + L2 LINE L2 2687 3310 -3 3088 118 113 84 chr2 165657699 165658400 -85029454 + L1MA9 LINE L1 5592 6312 0 191 304 25 0 chr2 165658709 165658788 -85029066 - L2 LINE L2 -532 2782 2702 272 344 41 25 chr2 165660629 165660751 -85027103 + L3 LINE CR1 497 620 -957 470 257 40 7 chr2 165661172 165661320 -85026534 + L1M4 LINE L1 4085 4237 -1909 411 187 252 0 chr2 165661328 165661483 -85026371 - L1MCa LINE L1 -4321 2105 1912 433 245 147 11 chr2 165661500 165661684 -85026170 + L3 LINE CR1 907 1115 -462 2226 90 45 0 chr2 165661805 165662137 -85025717 - L1MA3 LINE L1 0 6305 5959 233 289 0 0 chr2 165662853 165662929 -85024925 + A-rich Low_complexity Low_complexity 1 76 0 411 273 119 6 chr2 165662936 165663112 -85024742 + L3 LINE CR1 1356 1551 -26 194 125 0 100 chr2 165663255 165663295 -85024559 + L2 LINE L2 3266 3301 -12 2260 107 3 0 chr2 165663974 165664284 -85023570 - AluSq SINE Alu -2 311 1 1773 226 26 61 chr2 165664284 165664823 -85023031 + MLT2B1 LTR ERVL 1 520 0 2310 102 3 0 chr2 165665245 165665548 -85022306 - AluSg SINE Alu -6 304 1 607 206 17 56 chr2 165665721 165665901 -85021953 - L2 LINE L2 0 3313 3141 4077 176 28 55 chr2 165666616 165667495 -85020359 - MER21B LTR ERV1 -7 856 1 241 200 20 0 chr2 165667851 165667901 -85019953 - L2 LINE L2 0 3272 3222 7641 48 1 1 chr2 165668313 165670036 -85017818 + L1PA5 LINE L1 4429 6152 -2 332 310 69 30 chr2 165670230 165670439 -85017415 - MIR SINE MIR -5 257 41 21 0 0 0 chr2 165671341 165671362 -85016492 + AT_rich Low_complexity Low_complexity 1 21 0 239 78 26 78 chr2 165671362 165671439 -85016415 - L1MA3 LINE L1 -1 6304 6232 239 86 0 103 chr2 165672089 165672147 -85015707 - L1PA4 LINE L1 -1 6154 6103 684 176 0 133 chr2 165672247 165672457 -85015397 + MER3 DNA MER1_type 27 208 -1 242 242 30 81 chr2 165672784 165672883 -85014971 - MIR3 SINE MIR -103 105 12 1586 243 128 17 chr2 165674352 165674932 -85012922 + LTR48B LTR ERV1 1 644 0 246 279 29 0 chr2 165674936 165675004 -85012850 + MIR SINE MIR 75 144 -64 2604 45 3 0 chr2 165675273 165675581 -85012273 - AluY SINE Alu -2 309 1 196 214 0 0 chr2 165676206 165676248 -85011606 + L2 LINE L2 3221 3262 -10 4582 255 71 36 chr2 165676608 165678295 -85009559 - L1MEc LINE L1 -4228 2168 540 426 20 0 0 chr2 165678295 165678346 -85009508 + (TC)n Simple_repeat Simple_repeat 2 52 0 4582 255 71 36 chr2 165678346 165678575 -85009279 - L1MEc LINE L1 -5856 540 320 369 113 62 0 chr2 165678575 165678655 -85009199 + L1PA16 LINE L1 6080 6164 -2 4582 255 71 36 chr2 165678655 165678762 -85009092 - L1MEc LINE L1 -6076 320 37 282 276 11 11 chr2 165682803 165682890 -85004964 + CT-rich Low_complexity Low_complexity 1 87 0 227 344 11 22 chr2 165683447 165683537 -85004317 + MIR3 SINE MIR 111 199 -9 27 62 0 0 chr2 165684106 165684154 -85003700 + AT_rich Low_complexity Low_complexity 1 48 0 379 330 53 94 chr2 165685362 165685829 -85002025 - L2 LINE L2 -2 3270 2823 238 314 97 76 chr2 165686029 165686214 -85001640 - L2 LINE L2 -523 2791 2603 1512 245 44 46 chr2 165686820 165687356 -85000498 + MLT1E2 LTR MaLR 3 505 0 2173 140 8 17 chr2 165687408 165687464 -85000390 - MER7A DNA MER2_type -2692 346 291 2667 152 17 0 chr2 165687464 165687885 -84999969 + MSTA LTR MaLR 1 428 0 2173 140 8 17 chr2 165687885 165688179 -84999675 - MER7A DNA MER2_type -2747 291 1 1267 305 99 5 chr2 165688802 165689238 -84998616 + LTR16C LTR ERVL 1 477 -14 24 32 0 0 chr2 165689730 165689761 -84998093 + AT_rich Low_complexity Low_complexity 1 31 0 2590 64 0 0 chr2 165689912 165690223 -84997631 + AluY SINE Alu 1 311 0 191 102 0 61 chr2 165691061 165691110 -84996744 + (A)n Simple_repeat Simple_repeat 1 46 0 1346 185 54 40 chr2 165691600 165691898 -84995956 - AluJo SINE Alu -10 302 1 321 82 0 0 chr2 165692043 165692092 -84995762 + (TC)n Simple_repeat Simple_repeat 2 50 0 336 320 84 48 chr2 165692315 165692624 -84995230 - HAL1b LINE L1 -970 378 59 29 0 0 0 chr2 165692905 165692934 -84994920 + AT_rich Low_complexity Low_complexity 1 29 0 201 121 0 0 chr2 165693002 165693035 -84994819 + (TCCCC)n Simple_repeat Simple_repeat 5 37 0 1521 181 0 46 chr2 165693053 165693334 -84994520 - AluJo SINE Alu -39 273 6 2033 271 94 29 chr2 165693590 165694482 -84993372 - L1MEc LINE L1 -3905 2312 1376 336 48 0 0 chr2 165694482 165694524 -84993330 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 2033 271 94 29 chr2 165694524 165694724 -84993130 - L1MEc LINE L1 -4841 1376 1191 750 137 39 46 chr2 165694732 165694885 -84992969 - BC200 scRNA scRNA -47 153 2 342 228 11 0 chr2 165694912 165695004 -84992850 - L1MEc LINE L1 -5249 1147 1055 7738 20 0 1 chr2 165695021 165696476 -84991378 - L1PA3 LINE L1 0 6155 4702 585 113 38 38 chr2 165696476 165696582 -84991272 - BC200 scRNA scRNA -93 107 2 1442 297 55 67 chr2 165696612 165697636 -84990218 - L1MEc LINE L1 -5254 1142 132 189 74 0 0 chr2 165697648 165697675 -84990179 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 619 355 183 16 chr2 165698851 165699409 -84988445 + L3 LINE CR1 369 1019 -558 187 288 243 27 chr2 165699621 165699732 -84988122 + L3 LINE CR1 1209 1343 -234 272 235 0 24 chr2 165700252 165700337 -84987517 + L2 LINE L2 3115 3197 -116 829 80 0 0 chr2 165700347 165700460 -84987394 - L1MA1 LINE L1 0 7721 7609 15702 174 74 27 chr2 165700460 165703148 -84984706 - L1MA1 LINE L1 -326 7395 4834 2204 124 0 0 chr2 165703148 165703455 -84984399 - AluSc SINE Alu -2 307 1 15702 174 74 27 chr2 165703455 165706669 -84981185 - L1MA1 LINE L1 -2887 4834 1772 1976 144 79 15 chr2 165706669 165707010 -84980844 - THE1B LTR MaLR 0 364 2 11317 93 10 1 chr2 165707011 165708577 -84979277 - THE1B-int LTR MaLR 0 1580 1 2111 128 72 17 chr2 165708577 165708922 -84978932 - THE1B LTR MaLR 0 364 1 15702 174 74 27 chr2 165708922 165710051 -84977803 - L1MA1 LINE L1 -5948 1773 11 1141 209 95 71 chr2 165710092 165710503 -84977351 - MLT1C LTR MaLR -41 426 6 441 263 20 0 chr2 165710507 165710606 -84977248 + L2 LINE L2 3208 3308 -5 208 202 24 155 chr2 165710579 165710663 -84977191 - L2 LINE L2 -4 3309 3237 * 192 313 0 0 chr2 165710697 165710745 -84977109 + L2 LINE L2 3179 3226 -87 2471 60 0 13 chr2 165710775 165711090 -84976764 - AluY SINE Alu 0 311 1 22 70 0 0 chr2 165711924 165711967 -84975887 + AT_rich Low_complexity Low_complexity 1 43 0 285 29 0 0 chr2 165712096 165712130 -84975724 + (CA)n Simple_repeat Simple_repeat 2 35 0 1007 218 28 25 chr2 165713570 165713881 -84973973 - MER39 LTR ERV1 -4 662 392 207 91 0 68 chr2 165714166 165714210 -84973644 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2248 109 0 0 chr2 165714258 165714560 -84973294 - AluSg SINE Alu -8 302 1 235 203 135 11 chr2 165714570 165714670 -84973184 - MER39 LTR ERV1 -419 123 1 423 263 123 61 chr2 165716128 165716519 -84971335 - L1ME4a LINE L1 -1 6120 5706 262 256 59 66 chr2 165716560 165716903 -84970951 - L1ME4a LINE L1 -491 5630 5291 594 294 110 77 chr2 165716932 165717541 -84970313 - L1ME4a LINE L1 -913 5233 4605 905 162 45 0 chr2 165717573 165717727 -84970127 + MLT1D LTR MaLR 1 161 -344 847 217 43 0 chr2 165717766 165717950 -84969904 + MLT1D LTR MaLR 314 505 0 1643 168 66 0 chr2 165718039 165718325 -84969529 - AluSx SINE Alu -7 305 1 365 303 172 36 chr2 165718512 165718550 -84969304 - L1ME4a LINE L1 -2958 3188 3157 930 230 0 0 chr2 165718550 165718724 -84969130 + FAM SINE Alu 2 175 0 365 303 172 36 chr2 165718724 165719127 -84968727 - L1ME4a LINE L1 -2989 3157 2687 2623 134 26 44 chr2 165720386 165720930 -84966924 + L1MA8 LINE L1 5753 6286 -5 412 284 278 22 chr2 165721044 165721414 -84966440 - L1ME3 LINE L1 -268 6288 5824 1712 246 108 27 chr2 165721461 165722275 -84965579 - L1ME3 LINE L1 -806 5734 4855 2230 253 135 60 chr2 165722314 165724281 -84963573 - L1ME3 LINE L1 -1744 4796 2660 5360 148 19 0 chr2 165724281 165725634 -84962220 + L1PA16 LINE L1 4789 6157 -9 2230 253 135 60 chr2 165725634 165725781 -84962073 - L1ME3 LINE L1 -3880 2660 2525 3228 261 54 11 chr2 165725832 165727132 -84960722 - L1M4 LINE L1 -2436 3710 2355 335 257 0 0 chr2 165727134 165727204 -84960650 - L1ME3 LINE L1 -5811 729 660 4730 200 81 32 chr2 165727212 165728555 -84959299 + L1MDa LINE L1 1123 2544 -3996 4198 113 13 6 chr2 165728555 165729186 -84958668 - MER41B LTR ERV1 0 635 1 4730 200 81 32 chr2 165729186 165729295 -84958559 + L1MDa LINE L1 2544 2646 -3894 2061 269 19 12 chr2 165729321 165729551 -84958303 + L1MDa LINE L1 2747 2974 -3566 2485 43 3 0 chr2 165729551 165729856 -84957998 + AluY SINE Alu 1 306 -5 2061 269 19 12 chr2 165729856 165730310 -84957544 + L1MDa LINE L1 2974 3436 -3104 294 121 17 35 chr2 165730311 165730369 -84957485 + AluSq/x SINE Alu 87 143 -159 273 188 0 0 chr2 165730368 165730416 -84957438 + Alu SINE Alu 252 299 -3 * 1344 266 60 54 chr2 165730427 165731172 -84956682 + L1MDa LINE L1 3447 4196 -2344 788 284 48 21 chr2 165731166 165731500 -84956354 + L1MDa LINE L1 5067 5409 -1131 * 540 308 83 33 chr2 165731555 165732376 -84955478 - L1MEc LINE L1 -4750 1646 785 4443 45 4 1 chr2 165732701 165732722 -84955132 + L1P2 LINE L1 5097 5116 -1038 2341 54 0 7 chr2 165732722 165733019 -84954835 - L1PA6 LINE L1 -8 6146 5852 4443 45 4 1 chr2 165733019 165733696 -84954158 + L1P2 LINE L1 5116 5799 -355 455 290 39 77 chr2 165734457 165734984 -84952870 + L1MC4 LINE L1 7215 7743 -299 1708 121 52 33 chr2 165734984 165735309 -84952545 - AluSx SINE Alu 0 335 6 455 290 39 77 chr2 165735309 165735462 -84952392 + L1MC4 LINE L1 7743 7900 -142 21 0 0 0 chr2 165737161 165737182 -84950672 + AT_rich Low_complexity Low_complexity 1 21 0 379 162 68 0 chr2 165737274 165737348 -84950506 + MADE1 DNA Mariner 2 80 0 948 43 0 0 chr2 165737586 165737701 -84950153 - L1PA2 LINE L1 -3 6152 6038 456 271 50 8 chr2 165739736 165739882 -84947972 + MIR SINE MIR 37 187 -65 1960 135 3 7 chr2 165741818 165742106 -84945748 + AluSx SINE Alu 1 287 -25 1683 264 159 22 chr2 165742438 165743242 -84944612 - L1ME3A LINE L1 -2 6168 5255 240 200 0 0 chr2 165743265 165743315 -84944539 + CT-rich Low_complexity Low_complexity 1 50 0 1709 269 53 44 chr2 165743528 165744490 -84943364 - L1ME3A LINE L1 -1174 4972 4002 376 251 161 41 chr2 165744811 165745177 -84942677 - L1MC5 LINE L1 -48 7913 7504 6307 171 8 13 chr2 165745236 165746455 -84941399 + L1PA13 LINE L1 4186 5403 -760 2494 110 8 26 chr2 165746455 165746837 -84941017 - THE1C LTR MaLR 0 375 1 6307 171 8 13 chr2 165746837 165747589 -84940265 + L1PA13 LINE L1 5403 6158 -5 419 245 49 14 chr2 165747663 165747806 -84940048 - L1MC5 LINE L1 -514 7447 7300 216 0 0 0 chr2 165749530 165749554 -84938300 + (T)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr2 165749891 165749913 -84937941 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr2 165750163 165750191 -84937663 + AT_rich Low_complexity Low_complexity 1 28 0 802 118 0 8 chr2 165750191 165750310 -84937544 - AluSp/q SINE Alu -22 291 174 285 258 73 73 chr2 165751597 165751721 -84936133 - L2 LINE L2 -30 3283 3160 255 292 125 0 chr2 165751731 165751827 -84936027 - L2 LINE L2 -256 3057 2950 271 125 107 0 chr2 165752222 165752278 -84935576 + L1PA16 LINE L1 6102 6163 -3 27 0 0 0 chr2 165752557 165752584 -84935270 + AT_rich Low_complexity Low_complexity 1 27 0 439 306 93 29 chr2 165754174 165754452 -84933402 - L3b LINE CR1 -123 1460 1165 347 216 63 0 chr2 165755503 165755614 -84932240 + L1ME4a LINE L1 6002 6119 -2 2236 78 10 10 chr2 165755709 165756005 -84931849 + AluSc SINE Alu 1 296 -13 532 326 69 16 chr2 165756768 165757013 -84930841 + MIR SINE MIR 1 258 -4 299 340 70 83 chr2 165757015 165757315 -84930539 - L2 LINE L2 -5 3267 2972 457 301 181 26 chr2 165757319 165757705 -84930149 - MLT1K LTR MaLR -29 559 114 759 341 203 18 chr2 165757791 165758777 -84929077 - L2 LINE L2 -400 2914 1747 1051 224 33 12 chr2 165758859 165759104 -84928750 - MIR SINE MIR -10 252 3 422 299 71 0 chr2 165759211 165759365 -84928489 - MLT1J LTR MaLR -11 500 336 1304 175 28 55 chr2 165759411 165759737 -84928117 + MER33 DNA MER1_type 2 318 -6 809 301 106 0 chr2 165759742 165759998 -84927856 - MLT1J LTR MaLR -228 283 1 387 0 0 0 chr2 165760147 165760190 -84927664 + (TG)n Simple_repeat Simple_repeat 2 44 0 914 337 50 31 chr2 165760190 165760807 -84927047 - L2 LINE L2 -1980 1334 706 412 227 64 9 chr2 165760873 165760983 -84926871 + LTR40b LTR ERVL 1 116 -346 456 271 25 30 chr2 165761104 165761303 -84926551 - L2 LINE L2 -2411 903 706 1753 240 26 9 chr2 165761369 165761823 -84926031 + LTR40b LTR ERVL 1 462 0 2083 106 7 7 chr2 165763899 165764192 -84923662 + AluSx SINE Alu 9 301 -11 1232 236 85 14 chr2 165764747 165765183 -84922671 - MLT1C LTR MaLR 0 467 1 26 0 0 0 chr2 165765258 165765284 -84922570 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr2 165766171 165766199 -84921655 + AT_rich Low_complexity Low_complexity 1 28 0 247 390 59 7 chr2 165766869 165767005 -84920849 - MIR3 SINE MIR -33 175 33 228 214 0 0 chr2 165767890 165767932 -84919922 + CT-rich Low_complexity Low_complexity 1 42 0 1081 241 18 9 chr2 165769226 165769454 -84918400 + MIR SINE MIR 1 230 -32 1695 179 0 38 chr2 165770370 165770594 -84917260 + AluJo SINE Alu 6 237 -75 2303 126 39 8 chr2 165770594 165770958 -84916896 - THE1C LTR MaLR 0 375 1 9267 122 42 45 chr2 165770958 165772542 -84915312 - THE1C-int LTR MaLR 0 1580 1 2415 110 39 8 chr2 165772542 165772906 -84914948 - THE1C LTR MaLR 0 375 1 1695 179 0 38 chr2 165772906 165773039 -84914815 + AluJo SINE Alu 234 312 0 249 353 166 7 chr2 165773564 165773842 -84914012 + L3 LINE CR1 645 966 -611 3291 164 11 31 chr2 165774084 165774700 -84913154 + MER6A DNA MER2_type 2 605 0 243 292 67 45 chr2 165776464 165776553 -84911301 - L2 LINE L2 -33 3280 3190 1226 251 143 13 chr2 165776711 165777090 -84910764 + L1M1 LINE L1 10 437 -6412 7791 258 29 15 chr2 165777269 165779292 -84908562 + L1M1 LINE L1 676 2727 -4122 * 10342 197 20 23 chr2 165779289 165782244 -84905610 + L1M1 LINE L1 3423 6367 -638 1906 233 58 39 chr2 165782271 165783019 -84904835 + L1MC/D LINE L1 4663 5436 -743 25 31 0 0 chr2 165783060 165783092 -84904762 + AT_rich Low_complexity Low_complexity 1 32 0 322 321 41 56 chr2 165783189 165783385 -84904469 - L1 LINE L1 -1219 4927 4735 253 342 55 62 chr2 165783982 165784254 -84903600 - L2 LINE L2 -2359 955 686 307 306 81 8 chr2 165784322 165784446 -84903408 + Charlie1a DNA MER1_type 2 134 -1321 5348 210 30 19 chr2 165784464 165786597 -84901257 + L1MB7 LINE L1 4023 6178 -6 4885 185 70 42 chr2 165786601 165786731 -84901123 + Charlie1a DNA MER1_type 144 269 -2492 2428 75 3 7 chr2 165786731 165787037 -84900817 + AluSq SINE Alu 1 305 -8 4885 185 70 42 chr2 165787037 165787098 -84900756 + Charlie1a DNA MER1_type 269 327 -2434 2434 67 3 0 chr2 165787098 165787396 -84900458 + AluY SINE Alu 2 300 -11 4885 185 70 42 chr2 165787396 165788480 -84899374 + Charlie1a DNA MER1_type 327 1455 0 372 278 46 38 chr2 165788594 165788770 -84899084 - MIR SINE MIR -63 145 5 6426 108 87 33 chr2 165788770 165789914 -84897940 + pTR5 LTR ERV1 821 2025 -413 361 163 0 54 chr2 165789914 165790006 -84897848 + LTR30 LTR ERV1 544 630 -92 1538 88 0 31 chr2 165790015 165790243 -84897611 + pTR5 LTR ERV1 172 392 -2046 258 379 46 17 chr2 165790370 165790544 -84897310 - MIR SINE MIR -18 244 66 25 0 0 0 chr2 165790709 165790734 -84897120 + AT_rich Low_complexity Low_complexity 1 25 0 23 68 0 0 chr2 165790792 165790836 -84897018 + AT_rich Low_complexity Low_complexity 1 44 0 223 65 43 43 chr2 165790863 165790909 -84896945 + CT-rich Low_complexity Low_complexity 3 48 0 2089 174 49 35 chr2 165790949 165791402 -84896452 + LOR1b LTR ERV1 1 459 -2 767 200 76 12 chr2 165791402 165791555 -84896299 - Charlie1 DNA MER1_type -5 2756 2579 3625 164 23 67 chr2 165791555 165792376 -84895478 + LTR1 LTR ERV1 1 785 0 767 200 76 12 chr2 165792376 165792472 -84895382 - Charlie1 DNA MER1_type -182 2579 2491 226 130 19 19 chr2 165792473 165792527 -84895327 + (TA)n Simple_repeat Simple_repeat 1 54 0 4394 103 93 110 chr2 165792772 165794213 -84893641 + pTR5 LTR ERV1 66 2438 0 754 301 39 31 chr2 165794842 165795101 -84892753 + MIR SINE MIR 2 262 0 371 306 87 22 chr2 165795625 165795854 -84892000 + HAL1 LINE L1 1091 1334 -1173 345 341 53 0 chr2 165796218 165796388 -84891466 + MIR SINE MIR 74 252 -10 22 0 0 0 chr2 165796641 165796663 -84891191 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 165797162 165797198 -84890656 + AT_rich Low_complexity Low_complexity 1 36 0 506 248 55 45 chr2 165798172 165798374 -84889480 - MIR SINE MIR -56 206 3 233 284 239 9 chr2 165798598 165798707 -84889147 - MIR SINE MIR -78 184 51 395 231 0 0 chr2 165798833 165798924 -84888930 + L1M4 LINE L1 4519 4609 -1537 589 295 27 16 chr2 165798924 165799107 -84888747 + L3 LINE CR1 1308 1492 -85 529 317 58 8 chr2 165799232 165799472 -84888382 + MIR SINE MIR 11 262 0 1546 256 27 17 chr2 165800614 165801091 -84886763 - L1ME1 LINE L1 -8 6438 5957 376 203 38 0 chr2 165801091 165801170 -84886684 - MLT1A1 LTR MaLR -2 363 282 * 495 127 13 0 chr2 165801161 165801240 -84886614 - MLT1A1 LTR MaLR -285 80 1 7381 246 54 45 chr2 165801255 165804664 -84883190 - L1ME1 LINE L1 -504 5942 2508 2082 110 27 10 chr2 165804664 165804965 -84882889 - AluSg SINE Alu -4 306 1 7381 246 54 45 chr2 165804965 165805463 -84882391 - L1ME1 LINE L1 -3938 2508 2016 872 269 6 10 chr2 165805467 165805776 -84882078 - L1ME1 LINE L1 -4620 1987 1494 1783 156 53 35 chr2 165805777 165806116 -84881738 + MER21B LTR ERV1 503 847 -16 5296 153 22 3 chr2 165806404 165807401 -84880453 + L1PA15 LINE L1 5156 6165 0 220 293 17 0 chr2 165809207 165809265 -84878589 - L2 LINE L2 -5 3308 3250 24 32 0 0 chr2 165810089 165810120 -84877734 + AT_rich Low_complexity Low_complexity 1 31 0 183 114 0 0 chr2 165810343 165810378 -84877476 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2141 91 0 0 chr2 165810685 165810961 -84876893 - AluSg SINE Alu -13 297 22 229 372 131 25 chr2 165810975 165811257 -84876597 - L3 LINE CR1 -181 1396 1085 454 270 179 20 chr2 165811454 165811650 -84876204 - L3 LINE CR1 -859 718 492 231 325 114 0 chr2 165811680 165811803 -84876051 - MIR SINE MIR -79 183 47 307 260 34 75 chr2 165811822 165811862 -84875992 - L3 LINE CR1 -1136 441 401 2135 163 20 0 chr2 165811862 165812219 -84875635 + MER47A DNA MER2_type 2 365 -1 307 260 34 75 chr2 165812219 165812324 -84875530 - L3 LINE CR1 -1176 401 302 271 287 117 57 chr2 165812300 165812565 -84875289 + L2 LINE L2 3033 3313 0 * 365 289 25 63 chr2 165813132 165813291 -84874563 - L2 LINE L2 -192 3080 2928 315 387 46 13 chr2 165813670 165813975 -84873879 - L2 LINE L2 -1043 2271 1957 1249 160 28 0 chr2 165813997 165814209 -84873645 + AluJo SINE Alu 82 299 -13 196 185 15 31 chr2 165814211 165814276 -84873578 + GA-rich Low_complexity Low_complexity 3 66 0 215 221 182 39 chr2 165814297 165814374 -84873480 - MIR SINE MIR -25 237 150 277 163 102 0 chr2 165814563 165814612 -84873242 - MIR SINE MIR -113 149 96 681 318 85 41 chr2 165816758 165817214 -84870640 + L2 LINE L2 2641 3141 -172 2230 132 27 39 chr2 165817214 165817622 -84870232 - MER57A LTR ERV1 0 403 1 681 318 85 41 chr2 165817622 165817803 -84870051 + L2 LINE L2 3141 3313 0 3042 204 39 14 chr2 165818969 165819590 -84868264 - MER82 DNA MER2_type -6 647 12 264 30 0 0 chr2 165819601 165819634 -84868220 + (TG)n Simple_repeat Simple_repeat 1 33 0 432 252 233 14 chr2 165819865 165820075 -84867779 + MIR SINE MIR 7 262 0 192 40 0 0 chr2 165820147 165820172 -84867682 + (TTG)n Simple_repeat Simple_repeat 1 25 0 191 204 23 23 chr2 165820551 165820595 -84867259 + MIR SINE MIR 117 160 -102 1883 209 9 95 chr2 165820762 165821331 -84866523 + MLT2B1 LTR ERVL 1 520 0 180 111 0 0 chr2 165823225 165823252 -84864602 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 802 291 77 52 chr2 165825567 165826045 -84861809 - MLT1L LTR MaLR -9 606 117 554 259 113 87 chr2 165826263 165826633 -84861221 - MLT1J LTR MaLR -106 405 26 647 314 103 0 chr2 165829311 165829515 -84858339 + MIR SINE MIR 11 235 -27 613 225 126 50 chr2 165829797 165830019 -84857835 - MLT1J1 LTR MaLR -1 541 303 24 32 0 0 chr2 165830749 165830780 -84857074 + AT_rich Low_complexity Low_complexity 1 31 0 1518 165 55 15 chr2 165830838 165831153 -84856701 - AluSq SINE Alu 0 326 1 1525 143 0 4 chr2 165831713 165831944 -84855910 + AluSq SINE Alu 1 230 -83 252 227 0 93 chr2 165832274 165832349 -84855505 + MIR3 SINE MIR 132 199 -9 267 306 111 0 chr2 165832933 165833041 -84854813 + L2 LINE L2 3153 3272 0 181 273 0 0 chr2 165833194 165833238 -84854616 + MIR SINE MIR 120 163 -99 21 36 0 0 chr2 165833749 165833777 -84854077 + AT_rich Low_complexity Low_complexity 1 28 0 194 405 11 34 chr2 165833844 165833933 -84853921 - L2 LINE L2 -76 3196 3110 497 319 84 4 chr2 165834444 165834670 -84853184 + LTR16A LTR ERVL 207 450 0 2021 141 0 0 chr2 165835005 165835303 -84852551 - AluSx SINE Alu -14 298 1 180 387 67 35 chr2 165835376 165835720 -84852134 - L2 LINE L2 -561 2753 2399 222 250 125 0 chr2 165836617 165836713 -84851141 - MIR SINE MIR -9 253 146 550 186 0 0 chr2 165836716 165836813 -84851041 - FRAM SINE Alu -3 173 77 339 247 43 21 chr2 165836815 165836908 -84850946 - MIR SINE MIR -102 160 66 615 266 100 14 chr2 165837578 165837881 -84849973 - MLT1J1 LTR MaLR -107 339 1 432 298 50 46 chr2 165837883 165837986 -84849868 + MIR SINE MIR 41 142 -120 2159 120 0 0 chr2 165837986 165838285 -84849569 + AluSx SINE Alu 1 299 -13 432 298 50 46 chr2 165838285 165838399 -84849455 + MIR SINE MIR 142 259 -3 401 326 22 0 chr2 165838560 165838698 -84849156 - MIR SINE MIR -21 241 101 2011 115 0 49 chr2 165838699 165839004 -84848850 - AluSx SINE Alu -16 296 7 22 56 0 0 chr2 165840226 165840262 -84847592 + AT_rich Low_complexity Low_complexity 1 36 0 183 42 0 0 chr2 165840297 165840321 -84847533 + (CA)n Simple_repeat Simple_repeat 1 24 0 24 32 0 0 chr2 165841388 165841419 -84846435 + AT_rich Low_complexity Low_complexity 1 31 0 219 69 0 0 chr2 165842383 165842412 -84845442 + (CATATA)n Simple_repeat Simple_repeat 5 33 0 241 263 30 12 chr2 165842691 165842791 -84845063 + GA-rich Low_complexity Low_complexity 1 101 0 288 0 0 0 chr2 165843026 165843058 -84844796 + (TA)n Simple_repeat Simple_repeat 2 33 0 29 70 0 0 chr2 165843074 165843131 -84844723 + AT_rich Low_complexity Low_complexity 1 57 0 25 51 0 0 chr2 165844459 165844498 -84843356 + AT_rich Low_complexity Low_complexity 1 39 0 203 175 0 0 chr2 165844798 165844838 -84843016 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 22 35 0 0 chr2 165845925 165845954 -84841900 + AT_rich Low_complexity Low_complexity 1 29 0 1830 113 0 43 chr2 165848345 165848627 -84839227 + AluSq SINE Alu 35 304 -9 619 327 40 5 chr2 165848887 165849086 -84838768 - MIR SINE MIR -50 212 7 184 353 164 8 chr2 165849119 165849241 -84838613 + MIR SINE MIR 5 145 -117 613 200 23 31 chr2 165849246 165849376 -84838478 + FLAM_C SINE Alu 3 131 -12 212 237 105 105 chr2 165849398 165849512 -84838342 + MIR SINE MIR 137 250 -12 2376 91 0 0 chr2 165849657 165849955 -84837899 + AluSc SINE Alu 1 298 -11 22 0 0 0 chr2 165850232 165850254 -84837600 + AT_rich Low_complexity Low_complexity 1 22 0 5659 103 5 6 chr2 165850254 165851089 -84836765 - L1PB1 LINE L1 -1 6150 5317 26 30 0 0 chr2 165851597 165851630 -84836224 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 165851729 165851750 -84836104 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr2 165852020 165852065 -84835789 + AT_rich Low_complexity Low_complexity 1 45 0 321 89 0 0 chr2 165852573 165852618 -84835236 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 256 355 131 20 chr2 165853061 165853605 -84834249 - L2 LINE L2 -475 2839 2236 42 36 0 0 chr2 165854056 165854112 -84833742 + AT_rich Low_complexity Low_complexity 1 56 0 377 330 9 9 chr2 165854203 165854312 -84833542 + L2 LINE L2 3195 3303 -10 21 36 0 0 chr2 165854353 165854381 -84833473 + AT_rich Low_complexity Low_complexity 1 28 0 2326 298 121 24 chr2 165854618 165855034 -84832820 - L2 LINE L2 -62 3251 2876 7763 128 16 27 chr2 165855034 165856349 -84831505 - HSMAR2 DNA Mariner -1 1301 2 2326 298 121 24 chr2 165856349 165857325 -84830529 - L2 LINE L2 -437 2876 1752 253 204 20 0 chr2 165857332 165857381 -84830473 + L2 LINE L2 2613 2662 -652 1001 290 98 24 chr2 165857384 165857794 -84830060 - MLT1J1 LTR MaLR -5 441 2 2165 76 0 28 chr2 165858586 165858767 -84829087 - AluY SINE Alu 0 310 139 2472 81 0 0 chr2 165858767 165859077 -84828777 - AluSg SINE Alu 0 310 1 2165 76 0 28 chr2 165859077 165859213 -84828641 - AluY SINE Alu -171 139 1 198 103 0 0 chr2 165859235 165859264 -84828590 + (CCCCCT)n Simple_repeat Simple_repeat 3 31 0 1439 98 5 5 chr2 165859386 165859591 -84828263 + THE1B-int LTR MaLR 1370 1574 -6 2291 136 19 8 chr2 165859596 165859956 -84827898 + THE1B LTR MaLR 1 364 0 310 321 37 48 chr2 165860107 165860294 -84827560 - MIR SINE MIR -56 206 22 231 259 19 0 chr2 165860596 165860650 -84827204 - L2 LINE L2 -94 3219 3165 529 260 158 15 chr2 165860790 165860986 -84826868 - MLT1K LTR MaLR 0 588 365 881 136 0 0 chr2 165861107 165861239 -84826615 + AluSp/q SINE Alu 179 310 -3 790 278 75 58 chr2 165861443 165861910 -84825944 - MLT1L LTR MaLR -9 606 132 201 292 125 42 chr2 165862008 165862128 -84825726 - MIR SINE MIR -118 144 15 242 297 16 0 chr2 165862233 165862297 -84825557 - MER96 DNA MER1_type? 0 175 111 288 0 0 0 chr2 165862481 165862513 -84825341 + (T)n Simple_repeat Simple_repeat 1 32 0 432 0 0 0 chr2 165863524 165863572 -84824282 + (TCCA)n Simple_repeat Simple_repeat 2 49 0 328 348 61 0 chr2 165863580 165863695 -84824159 - L2 LINE L2 -1 3312 3191 714 125 33 92 chr2 165863897 165864049 -84823805 + MER20 DNA MER1_type 29 171 -48 2188 106 10 0 chr2 165864806 165865099 -84822755 + AluSx SINE Alu 10 305 -7 1016 84 17 84 chr2 165865100 165865279 -84822575 + AluSx SINE Alu 1 167 -145 209 354 12 12 chr2 165865279 165865361 -84822493 + CT-rich Low_complexity Low_complexity 2 83 0 540 0 0 0 chr2 165865409 165865469 -84822385 + (TA)n Simple_repeat Simple_repeat 1 60 0 180 313 55 31 chr2 165865530 165865658 -84822196 - L2 LINE L2 -221 3051 2921 227 257 122 40 chr2 165868200 165868274 -84819580 + MIR3 SINE MIR 86 165 -43 205 189 0 0 chr2 165868725 165868762 -84819092 + MER5B DNA MER1_type 7 43 -135 244 267 186 12 chr2 165868773 165868859 -84818995 + MIR SINE MIR 36 136 -126 290 295 72 36 chr2 165869005 165869171 -84818683 + MIR SINE MIR 35 206 -56 183 208 83 21 chr2 165869257 165869305 -84818549 - L2 LINE L2 -5 3308 3258 22 0 0 0 chr2 165870925 165870947 -84816907 + AT_rich Low_complexity Low_complexity 1 22 0 2025 128 0 4 chr2 165873820 165874159 -84813695 - AluSg SINE Alu 0 338 1 5008 156 13 70 chr2 165875858 165876933 -84810921 + L1MA8 LINE L1 5282 6161 -5 372 313 104 18 chr2 165877449 165877608 -84810246 - MLT1I LTR MaLR 0 409 237 576 191 107 28 chr2 165877608 165877786 -84810068 - MER95 LTR ERV 0 431 240 614 282 162 8 chr2 165878695 165878936 -84808918 - LTR16C LTR ERVL 0 491 214 180 0 0 0 chr2 165879448 165879468 -84808386 + (GGAAA)n Simple_repeat Simple_repeat 1 20 0 532 226 136 77 chr2 165879594 165879904 -84807950 - MLT1J2 LTR MaLR -19 431 100 209 353 16 41 chr2 165880283 165880405 -84807449 + MER5A DNA MER1_type 70 188 -1 200 411 38 19 chr2 165880405 165880560 -84807294 - MIR3 SINE MIR -48 160 3 23 0 0 0 chr2 165880631 165880654 -84807200 + AT_rich Low_complexity Low_complexity 1 23 0 9353 103 7 9 chr2 165883389 165884717 -84803137 - THE1B-int LTR MaLR -253 1327 3 1465 133 28 28 chr2 165884740 165884989 -84802865 - THE1B LTR MaLR -115 249 1 24 32 0 0 chr2 165886749 165886780 -84801074 + AT_rich Low_complexity Low_complexity 1 31 0 207 146 0 0 chr2 165886817 165886858 -84800996 + (A)n Simple_repeat Simple_repeat 1 41 0 1400 247 97 17 chr2 165887718 165888204 -84799650 + L1MC4a LINE L1 6163 6310 -49 466 277 76 27 chr2 165888219 165888403 -84799451 + MIR SINE MIR 59 251 -11 1222 231 102 64 chr2 165889237 165889676 -84798178 + MLT2B1 LTR ERVL 1 422 -98 183 100 0 0 chr2 165889676 165889706 -84798148 + (CA)n Simple_repeat Simple_repeat 2 31 0 1222 231 102 64 chr2 165889706 165889726 -84798128 + MLT2B1 LTR ERVL 422 440 -80 243 0 0 0 chr2 165889726 165889753 -84798101 + (CA)n Simple_repeat Simple_repeat 1 27 0 1222 231 102 64 chr2 165889753 165889793 -84798061 + MLT2B1 LTR ERVL 440 520 0 180 0 0 0 chr2 165890701 165890721 -84797133 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 748 216 42 47 chr2 165891456 165891692 -84796162 - L1MC4 LINE L1 0 8042 7808 495 211 10 0 chr2 165891690 165891794 -84796060 + L1MC4a LINE L1 7086 7190 -618 * 703 232 75 168 chr2 165891849 165892217 -84795637 + MER77 LTR ERV1 55 347 -258 2334 52 23 16 chr2 165892217 165892401 -84795453 - AluY SINE Alu -1 310 122 207 0 0 0 chr2 165892401 165892424 -84795430 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2334 52 23 16 chr2 165892424 165892547 -84795307 - AluY SINE Alu -189 122 1 703 232 75 168 chr2 165892547 165892781 -84795073 + MER77 LTR ERV1 347 601 -4 1201 195 0 0 chr2 165893718 165893944 -84793910 - AluJo SINE Alu -1 311 86 2162 107 7 10 chr2 165896401 165896700 -84791154 + AluSp SINE Alu 1 298 -15 745 206 15 78 chr2 165896792 165896998 -84790856 - MIR SINE MIR 0 262 71 1693 158 30 34 chr2 165898442 165898739 -84789115 + AluJo SINE Alu 1 296 -16 238 260 26 26 chr2 165899121 165899198 -84788656 + GA-rich Low_complexity Low_complexity 4 80 0 728 174 43 8 chr2 165899700 165899846 -84788008 + MLT1J2 LTR MaLR 5 195 -305 228 257 95 0 chr2 165899870 165899944 -84787910 + MLT1J2 LTR MaLR 364 444 -6 1851 163 52 19 chr2 165900575 165900938 -84786916 - THE1C LTR MaLR 0 375 1 275 302 60 0 chr2 165901097 165901213 -84786641 - MER117 DNA MER1_type -47 150 28 577 264 111 23 chr2 165902512 165902728 -84785126 - MIR SINE MIR 0 262 28 441 15 45 0 chr2 165903932 165903998 -84783856 + (TA)n Simple_repeat Simple_repeat 2 70 0 23 0 0 0 chr2 165904569 165904592 -84783262 + AT_rich Low_complexity Low_complexity 1 23 0 324 288 14 27 chr2 165904928 165905074 -84782780 - L1ME2 LINE L1 -275 5889 5746 1687 165 10 7 chr2 165905289 165905580 -84782274 + AluJb SINE Alu 1 292 -20 468 267 166 23 chr2 165907380 165907597 -84780257 + MIR SINE MIR 2 249 -13 1417 183 106 0 chr2 165909213 165909459 -84778395 + AluJo SINE Alu 5 276 -36 645 299 131 47 chr2 165909695 165910312 -84777542 + L2 LINE L2 2626 3313 0 25 31 0 0 chr2 165910430 165910462 -84777392 + AT_rich Low_complexity Low_complexity 1 32 0 869 266 53 50 chr2 165910905 165911224 -84776630 + MER21B LTR ERV1 395 714 -149 287 254 50 116 chr2 165911420 165911601 -84776253 - L2 LINE L2 0 3313 3145 268 275 34 7 chr2 165912336 165912485 -84775369 + (TA)n Simple_repeat Simple_repeat 2 154 0 1493 156 38 0 chr2 165913839 165914077 -84773777 - AluJb SINE Alu -20 292 46 187 339 0 0 chr2 165914331 165914390 -84773464 + MIR SINE MIR 42 100 -108 399 41 0 0 chr2 165915066 165915115 -84772739 + (TA)n Simple_repeat Simple_repeat 2 50 0 2822 184 132 134 chr2 165915564 165916162 -84771692 - L1MD3 LINE L1 -3 7992 7273 494 244 16 0 chr2 165916162 165916285 -84771569 - MLT1F1 LTR MaLR -442 125 1 2822 184 132 134 chr2 165916285 165916670 -84771184 - L1MD3 LINE L1 -722 7273 6889 282 302 17 70 chr2 165916800 165916827 -84771027 - L1M4 LINE L1 -1944 4202 4175 181 56 28 28 chr2 165916827 165916863 -84770991 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2415 75 0 0 chr2 165916865 165917157 -84770697 - AluY SINE Alu -19 292 1 282 302 17 70 chr2 165917157 165917298 -84770556 - L1M4 LINE L1 -1972 4174 4040 340 304 116 84 chr2 165917700 165918057 -84769797 - L1M4 LINE L1 -2324 3822 3437 2252 113 0 0 chr2 165918057 165918367 -84769487 - AluSg SINE Alu 0 310 1 340 304 116 84 chr2 165918367 165918595 -84769259 - L1M4 LINE L1 -2709 3437 3218 731 307 51 18 chr2 165919200 165919474 -84768380 + LTR16B LTR ERVL 176 458 -6 1476 22 0 0 chr2 165919741 165919923 -84767931 - L1P2 LINE L1 -683 5472 5291 * 4776 29 0 0 chr2 165919921 165920515 -84767339 + L1PA4 LINE L1 5578 6171 0 510 302 52 21 chr2 165921622 165921814 -84766040 + MIR SINE MIR 21 218 -44 472 248 227 7 chr2 165921829 165921970 -84765884 - MER5A DNA MER1_type -7 182 11 295 347 72 24 chr2 165922386 165922553 -84765301 + L2 LINE L2 3089 3263 -9 545 230 85 24 chr2 165923203 165923368 -84764486 + MER5B DNA MER1_type 3 177 -1 540 173 82 9 chr2 165924156 165924266 -84763588 + AluSg/x SINE Alu 192 309 0 196 51 26 26 chr2 165924269 165924308 -84763546 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 2127 131 0 3 chr2 165924341 165924638 -84763216 - AluSg SINE Alu -12 298 3 24 0 0 0 chr2 165924745 165924769 -84763085 + AT_rich Low_complexity Low_complexity 1 24 0 3891 119 12 9 chr2 165924784 165925347 -84762507 - MER61E LTR ERV1 -4 565 1 373 281 144 0 chr2 165926533 165926672 -84761182 - MIR SINE MIR -2 260 102 1998 186 24 3 chr2 165926828 165927204 -84760650 - MLT1C LTR MaLR -81 386 3 352 203 68 0 chr2 165927911 165927985 -84759869 + MIR SINE MIR 184 262 0 21 57 0 0 chr2 165928354 165928389 -84759465 + AT_rich Low_complexity Low_complexity 1 35 0 603 250 40 57 chr2 165928943 165929119 -84758735 + MER5B DNA MER1_type 4 176 -2 2361 66 7 3 chr2 165929150 165929452 -84758402 + AluY SINE Alu 1 303 -8 1464 221 53 62 chr2 165930300 165930770 -84757084 - MER31B LTR ERV1 0 466 1 432 290 30 30 chr2 165931927 165932058 -84755796 + MIR SINE MIR 27 157 -105 293 318 40 0 chr2 165932364 165932490 -84755364 + MIR SINE MIR 51 181 -81 279 0 0 0 chr2 165932498 165932529 -84755325 + (CA)n Simple_repeat Simple_repeat 2 32 0 195 42 0 0 chr2 165932528 165932552 -84755302 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 2244 116 6 0 chr2 165932674 165932985 -84754869 + AluSq SINE Alu 1 313 0 1848 181 9 20 chr2 165933037 165933379 -84754475 - MLT1A1 LTR MaLR -26 339 2 264 111 0 0 chr2 165933396 165933441 -84754413 + (CA)n Simple_repeat Simple_repeat 2 46 0 2774 236 57 32 chr2 165933442 165934669 -84753185 + L1ME1 LINE L1 4840 6096 -70 37 23 0 0 chr2 165935077 165935121 -84752733 + AT_rich Low_complexity Low_complexity 1 44 0 1038 117 31 76 chr2 165935125 165935379 -84752475 - L1MA7 LINE L1 0 6291 6050 5842 78 39 32 chr2 165935379 165936198 -84751656 - LTR12 LTR ERV1 0 826 2 1038 117 31 76 chr2 165936198 165936233 -84751621 - L1MA7 LINE L1 -241 6050 6015 195 341 95 40 chr2 165937322 165937448 -84750406 + L2 LINE L2 3140 3272 0 480 201 176 4 chr2 165937576 165937738 -84750116 + MIR SINE MIR 58 249 -13 345 352 19 25 chr2 165937785 165937944 -84749910 - MIR SINE MIR -62 146 34 494 299 88 23 chr2 165938266 165938680 -84749174 + MLT1L LTR MaLR 164 615 0 260 226 38 0 chr2 165939330 165939383 -84748471 + L2 LINE L2 3246 3300 -13 2127 86 24 3 chr2 165939423 165939713 -84748141 + AluSc SINE Alu 1 296 -13 2167 59 79 7 chr2 165939913 165940203 -84747651 + AluY SINE Alu 1 311 0 308 284 137 37 chr2 165940336 165940526 -84747328 - HAL1 LINE L1 -1622 885 677 1200 302 73 40 chr2 165940844 165941554 -84746300 - L2 LINE L2 -4 3309 2579 1458 225 66 35 chr2 165941554 165942007 -84745847 - MLT1C LTR MaLR 0 467 1 1200 302 73 40 chr2 165942007 165942131 -84745723 - L2 LINE L2 -734 2579 2461 626 279 35 26 chr2 165942133 165942362 -84745492 - HAL1 LINE L1 -2275 232 2 331 227 68 0 chr2 165942377 165942465 -84745389 - MER69 DNA AcHobo 0 2526 2433 1961 246 58 58 chr2 165942472 165943131 -84744723 + Zaphod DNA AcHobo 2 660 -3371 1942 224 87 32 chr2 165943134 165943844 -84744010 + Zaphod DNA AcHobo 3283 4031 0 1057 203 96 16 chr2 165943854 165944228 -84743626 - MER69 DNA AcHobo -110 2416 2013 1997 238 144 39 chr2 165944246 165944940 -84742914 - MER69 DNA AcHobo -1749 777 11 278 298 22 56 chr2 165945877 165946055 -84741799 + MIR SINE MIR 41 212 -50 39 50 0 0 chr2 165946066 165946126 -84741728 + AT_rich Low_complexity Low_complexity 1 60 0 204 313 25 25 chr2 165946932 165947012 -84740842 - L2 LINE L2 -537 2777 2698 254 274 28 47 chr2 165947908 165948014 -84739840 + MLT1L LTR MaLR 165 268 -347 2326 109 0 0 chr2 165948023 165948327 -84739527 + AluSg SINE Alu 1 304 -6 1814 213 95 30 chr2 165948514 165948988 -84738866 + MLT1D LTR MaLR 1 505 0 3675 167 79 21 chr2 165950034 165950214 -84737640 + MER6 DNA MER2_type 32 200 -665 210 37 0 0 chr2 165950214 165950241 -84737613 + (TG)n Simple_repeat Simple_repeat 1 27 0 3675 167 79 21 chr2 165950241 165950767 -84737087 + MER6 DNA MER2_type 200 790 -75 1651 160 22 44 chr2 165950767 165951085 -84736769 - AluJo SINE Alu -1 311 1 3675 167 79 21 chr2 165951085 165951166 -84736688 + MER6 DNA MER2_type 790 865 0 238 361 121 0 chr2 165951256 165951422 -84736432 + MIR SINE MIR 77 262 0 2454 78 0 10 chr2 165952297 165952604 -84735250 - AluSq SINE Alu -9 304 1 513 252 20 13 chr2 165953459 165953610 -84734244 + MER69A DNA AcHobo 1 152 -25 861 298 144 33 chr2 165953640 165954187 -84733667 + Charlie2 DNA MER1_type 1 608 -2254 725 219 114 19 chr2 165954288 165954612 -84733242 + Charlie2a DNA MER1_type 1473 1827 -1035 2399 205 63 21 chr2 165954740 165955516 -84732338 + Charlie2a DNA MER1_type 2004 2812 -50 319 287 9 56 chr2 165955964 165956072 -84731782 + L2 LINE L2 3210 3312 -1 541 310 0 7 chr2 165956800 165956945 -84730909 + MIR SINE MIR 36 179 -83 1795 58 0 9 chr2 165957277 165957502 -84730352 - AluY SINE Alu -14 297 75 25 65 0 0 chr2 165957700 165957746 -84730108 + AT_rich Low_complexity Low_complexity 1 46 0 315 0 0 0 chr2 165958887 165958922 -84728932 + (CA)n Simple_repeat Simple_repeat 2 36 0 201 216 0 0 chr2 165961366 165961403 -84726451 + MIR SINE MIR 117 153 -109 27 29 0 0 chr2 165963936 165963970 -84723884 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr2 165964813 165964836 -84723018 + AT_rich Low_complexity Low_complexity 1 23 0 305 293 131 20 chr2 165964845 165964944 -84722910 - MER91A DNA MER1_type -1 195 86 786 365 70 6 chr2 165965083 165965425 -84722429 - MER115 DNA AcHobo -327 366 3 615 264 204 0 chr2 165965451 165965731 -84722123 - LTR33 LTR ERVL -173 348 12 234 0 0 0 chr2 165966146 165966172 -84721682 + (T)n Simple_repeat Simple_repeat 1 26 0 2044 126 0 44 chr2 165966266 165966583 -84721271 - AluSx SINE Alu -9 303 1 24 0 0 0 chr2 165966621 165966645 -84721209 + AT_rich Low_complexity Low_complexity 1 24 0 243 195 78 13 chr2 165966898 165966975 -84720879 - MER103 DNA DNA -51 115 34 418 316 68 11 chr2 165968760 165968937 -84718917 - MIR SINE MIR -28 234 48 231 114 0 0 chr2 165969830 165969847 -84718007 + (CA)n Simple_repeat Simple_repeat 1 52 0 231 114 0 0 chr2 165969847 165969882 -84717972 + (CA)n Simple_repeat Simple_repeat 2 36 0 852 222 17 11 chr2 165970829 165971005 -84716849 - MER5A DNA MER1_type -12 177 1 1805 156 7 0 chr2 165971172 165971476 -84716378 + AluSx SINE Alu 1 306 0 23 33 0 0 chr2 165972295 165972325 -84715529 + AT_rich Low_complexity Low_complexity 1 30 0 29 28 0 0 chr2 165972370 165972406 -84715448 + AT_rich Low_complexity Low_complexity 1 36 0 185 333 0 0 chr2 165972905 165972959 -84714895 + L2 LINE L2 3250 3303 -10 357 235 167 53 chr2 165973004 165973136 -84714718 + MIR3 SINE MIR 53 199 -9 272 296 130 19 chr2 165973720 165973828 -84714026 + L2 LINE L2 3153 3272 0 21 36 0 0 chr2 165974536 165974564 -84713290 + AT_rich Low_complexity Low_complexity 1 28 0 187 405 11 34 chr2 165974631 165974720 -84713134 - L2 LINE L2 -76 3196 3110 264 342 35 9 chr2 165975895 165976009 -84711845 + MIR SINE MIR 138 254 -8 444 286 73 73 chr2 165977394 165977586 -84710268 - MIR SINE MIR -5 257 66 911 187 0 0 chr2 165977701 165977872 -84709982 + MER2 DNA MER2_type 40 210 -135 434 208 0 0 chr2 165977900 165977977 -84709877 + MER2 DNA MER2_type 269 345 0 369 105 0 0 chr2 165977999 165978056 -84709798 + MER53 DNA DNA 131 187 -2 21 0 0 0 chr2 165979250 165979271 -84708583 + AT_rich Low_complexity Low_complexity 1 21 0 2066 213 82 43 chr2 165979272 165979348 -84708506 + MER21B LTR ERV1 17 89 -774 1740 114 4 0 chr2 165979348 165979585 -84708269 - AluSq SINE Alu -11 302 65 2066 213 82 43 chr2 165979585 165980091 -84707763 + MER21B LTR ERV1 89 622 -241 948 101 0 0 chr2 165980092 165980230 -84707624 + (TTCC)n Simple_repeat Simple_repeat 4 141 0 346 279 14 71 chr2 165981135 165981275 -84706579 - MIR SINE MIR -51 211 80 758 322 131 12 chr2 165982205 165982633 -84705221 - MLT1K LTR MaLR -92 496 18 223 370 9 37 chr2 165983911 165984019 -84703835 + L2 LINE L2 3165 3269 -3 2035 101 4 4 chr2 165984325 165984592 -84703262 - AluSg1 SINE Alu -42 267 1 195 100 0 0 chr2 165984619 165984649 -84703205 + (ATGGTG)n Simple_repeat Simple_repeat 6 35 0 463 182 52 52 chr2 165984821 165985090 -84702764 - L1M4 LINE L1 -1944 4202 3809 * 1046 259 142 2 chr2 165985088 165985490 -84702364 - L1M4 LINE L1 -3434 2712 2255 * 1461 162 86 37 chr2 165985487 165985509 -84702345 + L1M2 LINE L1 4203 4222 -1924 291 65 0 48 chr2 165985509 165985571 -84702283 + (TA)n Simple_repeat Simple_repeat 1 59 0 1461 162 86 37 chr2 165985571 165985931 -84701923 + L1M2 LINE L1 4222 4604 -1542 * 35760 34 1 0 chr2 165985930 165991237 -84696617 + L1PA3 LINE L1 841 6150 -5 3125 167 72 14 chr2 165991243 165992147 -84695707 + L1M2 LINE L1 4600 5557 -734 634 251 158 57 chr2 165992742 165993165 -84694689 - MLT1H LTR MaLR 0 549 84 310 333 99 9 chr2 165994470 165994581 -84693273 - L2 LINE L2 -5 3267 3147 448 174 23 0 chr2 165994642 165994728 -84693126 - MER33 DNA MER1_type -236 88 1 400 207 23 0 chr2 165994942 165995029 -84692825 - MER103 DNA DNA -21 145 57 200 259 29 149 chr2 165995298 165995372 -84692482 + L2 LINE L2 2939 2982 -290 2416 83 7 0 chr2 165995372 165995674 -84692180 + AluSp SINE Alu 5 308 -5 200 259 29 149 chr2 165995674 165995773 -84692081 + L2 LINE L2 2982 3091 -181 1547 92 5 42 chr2 165997561 165997778 -84690076 - AluSq SINE Alu -104 209 1 1676 250 91 98 chr2 165998668 165999222 -84688632 + L1MC4 LINE L1 5975 6531 -1277 2281 95 20 0 chr2 165999222 165999517 -84688337 + AluSc SINE Alu 1 301 -8 1676 250 91 98 chr2 165999517 166000008 -84687846 + L1MC4 LINE L1 6531 7024 -784 227 79 26 0 chr2 166000008 166000046 -84687808 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 1676 250 91 98 chr2 166000046 166000065 -84687789 + L1MC4 LINE L1 7024 7042 -766 1816 143 66 0 chr2 166000065 166000337 -84687517 + AluSx SINE Alu 1 290 -22 1676 250 91 98 chr2 166000337 166000709 -84687145 + L1MC4 LINE L1 7042 7325 -483 1589 141 8 0 chr2 166000709 166000957 -84686897 + Tigger1 DNA MER2_type 1 250 -2168 * 5056 115 21 3 chr2 166000950 166001662 -84686192 + Tigger1 DNA MER2_type 1694 2418 0 1449 261 38 52 chr2 166001663 166002223 -84685631 + L1MC4 LINE L1 7491 8042 0 21 0 0 0 chr2 166002936 166002957 -84684897 + AT_rich Low_complexity Low_complexity 1 21 0 238 191 0 0 chr2 166002996 166003043 -84684811 + CT-rich Low_complexity Low_complexity 1 47 0 279 309 100 70 chr2 166003871 166004302 -84683552 - L2 LINE L2 -3 3269 2826 2198 242 56 15 chr2 166004361 166004882 -84682972 + MER74A LTR ERVL 3 544 -14 405 0 0 0 chr2 166004888 166004933 -84682921 + (TA)n Simple_repeat Simple_repeat 1 45 0 2319 83 0 7 chr2 166004936 166005238 -84682616 - AluY SINE Alu -11 300 1 787 117 0 0 chr2 166006495 166006606 -84681248 + L1PA8 LINE L1 6052 6162 -10 2326 87 0 3 chr2 166006637 166006936 -84680918 + AluSc SINE Alu 1 298 -11 21 0 0 0 chr2 166007178 166007199 -84680655 + AT_rich Low_complexity Low_complexity 1 21 0 469 212 12 0 chr2 166008530 166008615 -84679239 + MER5A DNA MER1_type 102 187 -2 799 173 135 0 chr2 166008726 166008882 -84678972 + MER20 DNA MER1_type 36 212 -7 258 261 31 0 chr2 166008885 166008950 -84678904 + MLT1L LTR MaLR 190 256 -359 484 338 23 17 chr2 166009530 166009876 -84677978 - HAL1 LINE L1 -737 1770 1423 21 36 0 0 chr2 166009901 166009929 -84677925 + AT_rich Low_complexity Low_complexity 1 28 0 1053 133 35 53 chr2 166009933 166010159 -84677695 - L1MA9 LINE L1 -17 6295 6074 234 122 0 82 chr2 166010162 166010211 -84677643 + L1MA9 LINE L1 5997 6041 -271 2237 117 0 0 chr2 166010355 166010662 -84677192 - AluSg SINE Alu -3 307 1 633 249 43 22 chr2 166011056 166011241 -84676613 + MER5A DNA MER1_type 1 189 0 336 309 21 0 chr2 166011916 166012010 -84675844 - MER5A DNA MER1_type -84 105 10 488 254 61 39 chr2 166014030 166014071 -84673783 - L1MD3 LINE L1 -2027 5968 5928 1820 91 53 11 chr2 166014071 166014325 -84673529 - L1PA10 LINE L1 -234 5934 5667 1333 46 0 0 chr2 166014325 166014474 -84673380 + L1PA10 LINE L1 6013 6164 -4 714 305 62 7 chr2 166014524 166014894 -84672960 - MLT1J1 LTR MaLR -2 444 12 182 222 16 79 chr2 166014919 166014982 -84672872 + MIR SINE MIR 21 79 -129 224 321 80 18 chr2 166015651 166015763 -84672091 + L2 LINE L2 2227 2345 -969 895 330 58 58 chr2 166015911 166016703 -84671151 + L1MEc LINE L1 170 961 -5435 911 76 84 30 chr2 166016703 166016834 -84671020 - MER85 DNA T2_type -1 138 1 895 330 58 58 chr2 166016834 166016871 -84670983 + L1MEc LINE L1 961 997 -5399 1717 115 57 11 chr2 166016871 166017150 -84670704 - AluSg SINE Alu -18 292 1 895 330 58 58 chr2 166017150 166017706 -84670148 + L1MEc LINE L1 996 1556 -4840 2278 237 34 11 chr2 166017852 166018752 -84669102 - L1MCb LINE L1 -4856 1189 568 1581 276 42 27 chr2 166018858 166019409 -84668445 - L1MCb LINE L1 -5486 559 1 375 278 32 29 chr2 166019435 166019631 -84668223 - L1MC4 LINE L1 -889 6934 6730 645 210 204 0 chr2 166070860 166071017 -84616837 + MER20 DNA MER1_type 31 219 0 294 191 0 0 chr2 166071813 166071860 -84615994 + Tigger3(Golem) DNA MER2_type 2983 3029 0 2089 147 0 29 chr2 166071875 166072222 -84615632 - MER1B DNA MER1_type 0 337 1 1825 154 14 47 chr2 166072223 166072567 -84615287 - MLT2C1 LTR ERVL -62 335 3 937 266 40 9 chr2 166072671 166072897 -84614957 + MIR SINE MIR 21 253 -9 204 239 55 73 chr2 166073522 166073631 -84614223 + L2 LINE L2 3110 3216 -97 214 341 117 68 chr2 166075024 166075332 -84612522 - L2 LINE L2 0 3272 2950 1363 241 149 23 chr2 166075479 166075961 -84611893 - MLT1H LTR MaLR -6 543 1 23 33 0 0 chr2 166077855 166077885 -84609969 + AT_rich Low_complexity Low_complexity 1 30 0 589 336 37 9 chr2 166077985 166078199 -84609655 - MIR SINE MIR -26 236 17 252 143 0 0 chr2 166078445 166078487 -84609367 + (TA)n Simple_repeat Simple_repeat 1 42 0 181 290 0 75 chr2 166078532 166078625 -84609229 + L2 LINE L2 1654 1739 -1575 307 253 46 11 chr2 166078717 166078804 -84609050 - HAL1 LINE L1 -1886 621 532 284 358 52 18 chr2 166078888 166079117 -84608737 - HAL1 LINE L1 -2129 378 142 204 357 32 16 chr2 166080518 166080644 -84607210 + MER5A DNA MER1_type 59 186 -3 205 154 0 26 chr2 166081021 166081060 -84606794 - MIR SINE MIR -50 212 175 2240 146 6 3 chr2 166081094 166081458 -84606396 - MER47A DNA MER2_type 0 366 2 6728 24 0 0 chr2 166081458 166082240 -84605614 - L1HS LINE L1 -1914 4232 3451 * 9680 15 0 1 chr2 166082239 166084143 -84603711 + L1HS LINE L1 4251 6154 -1 29 28 0 0 chr2 166084143 166084179 -84603675 + AT_rich Low_complexity Low_complexity 1 36 0 268 229 43 14 chr2 166085444 166085514 -84602340 + MER102a DNA MER1_type 235 306 -24 237 233 42 33 chr2 166085729 166085849 -84602005 + L1ME1 LINE L1 5761 5881 -240 411 321 38 0 chr2 166085876 166086007 -84601847 - MER63A DNA MER1_type -3 207 72 2190 109 20 0 chr2 166086969 166087272 -84600582 - AluSp SINE Alu -4 309 1 471 259 36 30 chr2 166089621 166089787 -84598067 + L1ME1 LINE L1 5976 6142 -24 625 153 89 0 chr2 166091904 166092028 -84595826 - L1PA11 LINE L1 -6 6168 6034 984 228 35 22 chr2 166092028 166092260 -84595594 - MLT2B3 LTR ERVL -61 493 259 1984 166 6 29 chr2 166092372 166092716 -84595138 + MER1B DNA MER1_type 1 336 -1 527 299 200 44 chr2 166093771 166094176 -84593678 - L2 LINE L2 0 3313 2846 193 311 47 57 chr2 166094616 166094722 -84593132 + MER5A DNA MER1_type 32 136 -53 24 0 0 0 chr2 166095981 166096005 -84591849 + AT_rich Low_complexity Low_complexity 1 24 0 341 267 57 61 chr2 166096251 166096442 -84591412 - MIR SINE MIR -42 220 32 1490 97 0 0 chr2 166097210 166097396 -84590458 + AluSc SINE Alu 1 186 -123 611 103 0 0 chr2 166097396 166097483 -84590371 + AluSp/q SINE Alu 221 307 -6 486 202 0 0 chr2 166098103 166098187 -84589667 + MER5A DNA MER1_type 12 95 -94 249 247 57 44 chr2 166098685 166098843 -84589011 + L1MEc LINE L1 1313 1472 -4924 648 274 55 78 chr2 166098975 166099282 -84588572 + MLT1H LTR MaLR 31 330 -219 422 313 90 10 chr2 166100080 166100387 -84587467 + L1ME LINE L1 5479 5807 -357 239 207 17 17 chr2 166100528 166100586 -84587268 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 238 302 95 69 chr2 166100851 166100967 -84586887 - L2 LINE L2 -4 3268 3150 1727 144 71 37 chr2 166100998 166101324 -84586530 - MER1B DNA MER1_type 0 337 1 376 277 45 0 chr2 166101485 166101597 -84586257 - MIR SINE MIR 0 262 146 2202 193 50 20 chr2 166101771 166102311 -84585543 - L1MA6 LINE L1 -4 6296 5741 317 279 8 70 chr2 166102414 166102543 -84585311 + MER77 LTR ERV1 82 202 -403 227 261 126 92 chr2 166102618 166102737 -84585117 + MER77 LTR ERV1 231 353 -252 2372 51 9 25 chr2 166102755 166102946 -84584908 - AluY SINE Alu -1 310 124 234 0 0 0 chr2 166102946 166102972 -84584882 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2372 51 9 25 chr2 166102972 166103095 -84584759 - AluY SINE Alu -187 124 1 664 243 97 52 chr2 166103095 166103421 -84584433 + MER77 LTR ERV1 344 655 -4 1449 247 94 15 chr2 166103551 166104037 -84583817 + L1MC4a LINE L1 6163 6310 -49 466 277 76 27 chr2 166104052 166104236 -84583618 + MIR SINE MIR 59 251 -11 1222 226 104 62 chr2 166105070 166105508 -84582346 + MLT2B1 LTR ERVL 1 419 -101 183 100 0 0 chr2 166105508 166105538 -84582316 + (CA)n Simple_repeat Simple_repeat 2 31 0 1222 226 104 62 chr2 166105538 166105557 -84582297 + MLT2B1 LTR ERVL 419 436 -84 189 0 0 0 chr2 166105557 166105578 -84582276 + (CA)n Simple_repeat Simple_repeat 1 21 0 1222 226 104 62 chr2 166105578 166105618 -84582236 + MLT2B1 LTR ERVL 436 520 0 180 0 0 0 chr2 166106526 166106546 -84581308 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 185 184 0 26 chr2 166107706 166107744 -84580110 - L2 LINE L2 -35 3237 3201 1773 210 42 22 chr2 166108189 166108684 -84579170 - MLT1D LTR MaLR 0 505 1 237 83 0 0 chr2 166108760 166108796 -84579058 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr2 166109034 166109056 -84578798 + AT_rich Low_complexity Low_complexity 1 22 0 577 264 111 23 chr2 166110238 166110454 -84577400 + MIR SINE MIR 28 262 0 2026 128 0 4 chr2 166113162 166113481 -84574373 + AluSg SINE Alu 1 318 0 468 267 166 23 chr2 166117391 166117608 -84570246 - MIR SINE MIR -13 249 2 1672 168 10 7 chr2 166119406 166119697 -84568157 - AluJb SINE Alu -20 292 1 288 283 8 33 chr2 166119939 166120059 -84567795 + L1ME3A LINE L1 5773 5889 -281 23 0 0 0 chr2 166120395 166120418 -84567436 + AT_rich Low_complexity Low_complexity 1 23 0 219 69 0 0 chr2 166121072 166121101 -84566753 + (TA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr2 166124248 166124270 -84563584 + AT_rich Low_complexity Low_complexity 1 22 0 195 340 78 57 chr2 166124547 166124688 -84563166 - MIR3 SINE MIR -62 146 3 227 257 122 40 chr2 166127210 166127284 -84560570 + MIR3 SINE MIR 86 165 -43 205 189 0 0 chr2 166127735 166127772 -84560082 + MER5B DNA MER1_type 7 43 -135 244 267 186 12 chr2 166127783 166127869 -84559985 + MIR SINE MIR 36 136 -126 290 295 72 36 chr2 166128015 166128181 -84559673 + MIR SINE MIR 35 206 -56 183 208 83 21 chr2 166128267 166128315 -84559539 - L2 LINE L2 -5 3308 3258 180 313 55 31 chr2 166128489 166128617 -84559237 + L2 LINE L2 2921 3051 -221 315 0 0 0 chr2 166128676 166128711 -84559143 + (TA)n Simple_repeat Simple_repeat 2 36 0 2066 82 9 73 chr2 166128711 166129041 -84558813 - AluSx SINE Alu -3 309 1 2217 106 7 0 chr2 166129042 166129334 -84558520 - AluSx SINE Alu -9 303 10 1430 179 106 0 chr2 166131292 166131538 -84556316 + AluJo SINE Alu 5 276 -36 645 299 131 47 chr2 166131774 166132391 -84555463 + L2 LINE L2 2626 3313 0 25 31 0 0 chr2 166132509 166132541 -84555313 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 166132878 166132917 -84554937 + AT_rich Low_complexity Low_complexity 1 39 0 869 266 53 50 chr2 166132984 166133303 -84554551 + MER21B LTR ERV1 395 714 -149 287 254 50 116 chr2 166133499 166133680 -84554174 - L2 LINE L2 0 3313 3145 268 275 34 7 chr2 166134415 166134564 -84553290 + (TA)n Simple_repeat Simple_repeat 1 153 0 1493 156 38 0 chr2 166135918 166136156 -84551698 - AluJb SINE Alu -20 292 46 187 339 0 0 chr2 166136410 166136469 -84551385 + MIR SINE MIR 42 100 -108 261 0 0 0 chr2 166137146 166137175 -84550679 + (TA)n Simple_repeat Simple_repeat 2 30 0 3401 186 32 4 chr2 166137590 166138226 -84549628 - L1 LINE L1 -784 6424 5764 2274 105 0 3 chr2 166138226 166138532 -84549322 - AluSc SINE Alu -4 305 1 3401 186 32 4 chr2 166138532 166138615 -84549239 - L1 LINE L1 -1444 5764 5685 1722 258 65 34 chr2 166138611 166138778 -84549076 - L1 LINE L1 -4877 2332 2172 * 1750 125 29 36 chr2 166138778 166139059 -84548795 + AluSx SINE Alu 1 279 -33 473 44 15 0 chr2 166139062 166139130 -84548724 + (TAAA)n Simple_repeat Simple_repeat 2 70 0 1722 258 65 34 chr2 166139130 166139632 -84548222 - L1 LINE L1 -5038 2171 1638 816 304 88 35 chr2 166139637 166140289 -84547565 - L1 LINE L1 -6569 640 10 261 0 0 0 chr2 166140289 166140318 -84547536 + (TG)n Simple_repeat Simple_repeat 2 30 0 391 222 154 99 chr2 166144288 166144450 -84543404 + MIR SINE MIR 21 191 -71 395 361 119 9 chr2 166144864 166145091 -84542763 + MIR SINE MIR 4 255 -7 199 385 152 39 chr2 166145250 166145675 -84542179 - L2 LINE L2 -4 3268 2797 2409 84 7 0 chr2 166145692 166146000 -84541854 + AluSp SINE Alu 1 310 -3 245 139 0 0 chr2 166146289 166146332 -84541522 + 5S rRNA rRNA 1 43 -78 245 139 0 0 chr2 166146343 166146386 -84541468 + 5S rRNA rRNA 1 43 -78 32 43 0 0 chr2 166147708 166147754 -84540100 + AT_rich Low_complexity Low_complexity 1 46 0 856 211 0 6 chr2 166147766 166147932 -84539922 - FRAM SINE Alu -1 165 1 942 262 62 13 chr2 166149535 166149840 -84538014 - MER46C DNA MER2_type -8 330 11 210 253 93 13 chr2 166149988 166150063 -84537791 + L3b LINE CR1 1241 1321 -262 259 232 14 0 chr2 166151378 166151447 -84536407 - L1ME4a LINE L1 -70 6051 5982 262 270 30 10 chr2 166152552 166152652 -84535202 - L1ME4a LINE L1 -448 5673 5572 180 0 0 0 chr2 166152963 166152983 -84534871 + (TTTTTA)n Simple_repeat Simple_repeat 6 25 0 558 153 27 0 chr2 166153313 166153424 -84534430 + L1MB4 LINE L1 6066 6179 -1 520 169 23 153 chr2 166153575 166153752 -84534102 - L1ME1 LINE L1 -5 6555 6402 1848 245 100 28 chr2 166153756 166154824 -84533030 - L1M4 LINE L1 -2734 3412 2268 884 217 16 11 chr2 166154863 166155052 -84532802 - L1ME1 LINE L1 -657 6096 5907 2290 80 0 0 chr2 166155414 166155702 -84532152 + AluY SINE Alu 1 288 -23 334 256 30 30 chr2 166155708 166155841 -84532013 - L1ME1 LINE L1 -996 5544 5412 * 1769 210 30 142 chr2 166155814 166156610 -84531244 - L1ME1 LINE L1 -1756 4784 4078 317 248 47 60 chr2 166156649 166156798 -84531056 - L1ME1 LINE L1 -3563 2977 2831 589 70 0 82 chr2 166156802 166156973 -84530881 + (TA)n Simple_repeat Simple_repeat 1 157 0 512 176 9 9 chr2 166156994 166157102 -84530752 - L1ME1 LINE L1 -3756 2784 2677 340 211 137 0 chr2 166157104 166157199 -84530655 - L1ME1 LINE L1 -6384 156 49 3677 226 42 14 chr2 166157228 166158927 -84528927 - L1MB8 LINE L1 -6 6172 4425 1320 126 0 0 chr2 166158927 166159118 -84528736 - AluSc SINE Alu -5 304 114 1906 248 65 43 chr2 166159120 166159890 -84527964 - L1MB8 LINE L1 -1776 4370 3584 1874 305 117 16 chr2 166159904 166160694 -84527160 + L1M4b LINE L1 68 936 -5923 1908 65 37 65 chr2 166161086 166161380 -84526474 - AluY SINE Alu -25 286 1 992 329 35 27 chr2 166161512 166162032 -84525822 - L1ME LINE L1 -5541 529 6 548 265 86 26 chr2 166162132 166162445 -84525409 - L1MEc LINE L1 -3979 2417 2086 233 288 144 8 chr2 166162588 166162706 -84525148 - L1MEc LINE L1 -4582 1814 1681 309 313 10 21 chr2 166162902 166162998 -84524856 + CT-rich Low_complexity Low_complexity 2 96 0 189 154 0 0 chr2 166163016 166163055 -84524799 + CT-rich Low_complexity Low_complexity 2 40 0 942 309 115 3 chr2 166163091 166163762 -84524092 - L1MEc LINE L1 -4815 1581 836 493 288 66 55 chr2 166163843 166164100 -84523754 - L1MEc LINE L1 -6038 358 99 2067 209 55 92 chr2 166164124 166164778 -84523076 - MER21B LTR ERV1 -2 861 232 495 77 0 0 chr2 166164949 166165014 -84522840 - AluY SINE Alu -37 274 210 294 361 39 39 chr2 166165254 166165509 -84522345 + L2 LINE L2 2477 2731 -583 433 323 87 62 chr2 166166002 166166118 -84521736 + L2 LINE L2 2712 2824 -489 2725 7 0 3 chr2 166166118 166166417 -84521437 - AluYa5 SINE Alu -13 298 1 433 323 87 62 chr2 166166417 166166684 -84521170 + L2 LINE L2 2824 3120 -193 1621 182 7 11 chr2 166166684 166166970 -84520884 + AluJb SINE Alu 1 285 -27 433 323 87 62 chr2 166166970 166167170 -84520684 + L2 LINE L2 3120 3313 0 2774 83 88 5 chr2 166167951 166168359 -84519495 - MLT2A1 LTR ERVL -2 442 1 37359 81 6 8 chr2 166168359 166173278 -84514576 - HERVL-A1 LTR ERVL 0 5654 743 700 65 0 0 chr2 166173278 166173370 -84514484 - MLT2A2 LTR ERVL -361 92 1 258 116 0 0 chr2 166173427 166173470 -84514384 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 335 254 116 29 chr2 166174021 166174159 -84513695 - MIR SINE MIR -30 232 83 2135 113 0 0 chr2 166174167 166174479 -84513375 - AluY SINE Alu 0 312 1 243 310 80 44 chr2 166175867 166175980 -84511874 - MIR SINE MIR -143 119 3 22 0 0 0 chr2 166176029 166176051 -84511803 + AT_rich Low_complexity Low_complexity 1 22 0 770 304 27 19 chr2 166176403 166176660 -84511194 + MIR SINE MIR 4 262 0 468 0 0 0 chr2 166178024 166178076 -84509778 + (TCCA)n Simple_repeat Simple_repeat 2 53 0 328 348 61 0 chr2 166178084 166178199 -84509655 - L2 LINE L2 -1 3312 3191 952 142 35 71 chr2 166178401 166178598 -84509256 + MER20 DNA MER1_type 29 218 -1 2279 123 0 0 chr2 166178616 166178925 -84508929 + AluSq SINE Alu 1 309 -4 790 278 75 58 chr2 166179129 166179596 -84508258 - MLT1L LTR MaLR -9 606 132 201 292 125 42 chr2 166179694 166179814 -84508040 - MIR SINE MIR -118 144 15 537 230 85 24 chr2 166180660 166180825 -84507029 - MER5B DNA MER1_type -1 177 3 295 347 72 24 chr2 166181475 166181642 -84506212 - L2 LINE L2 -9 3263 3089 472 248 227 7 chr2 166182058 166182199 -84505655 + MER5A DNA MER1_type 11 182 -7 510 302 52 21 chr2 166182214 166182406 -84505448 - MIR SINE MIR -44 218 21 257 50 0 25 chr2 166183513 166183553 -84504301 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 4775 29 0 0 chr2 166183553 166184107 -84503747 - L1PA4 LINE L1 -24 6131 5578 1987 29 0 0 chr2 166184105 166184349 -84503505 + L1P2 LINE L1 5291 5534 -621 * 285 302 60 0 chr2 166184603 166184719 -84503135 + MER117 DNA MER1_type 28 150 -47 1851 163 52 19 chr2 166184878 166185241 -84502613 + THE1C LTR MaLR 1 375 0 228 257 95 0 chr2 166185872 166185946 -84501908 - MLT1J2 LTR MaLR -6 444 364 728 174 43 8 chr2 166185970 166186116 -84501738 - MLT1J2 LTR MaLR -305 145 5 238 260 26 26 chr2 166186618 166186695 -84501159 + CT-rich Low_complexity Low_complexity 4 80 0 1721 158 30 27 chr2 166187077 166187374 -84500480 - AluJo SINE Alu -14 298 1 2140 116 0 7 chr2 166188770 166189072 -84498782 + AluY SINE Alu 1 300 -11 600 220 48 18 chr2 166189606 166189774 -84498080 + L1MC5 LINE L1 7753 7925 -36 288 261 84 79 chr2 166190388 166190591 -84497263 - MLT1H LTR MaLR 0 549 346 198 277 21 0 chr2 166190633 166190680 -84497174 + L2 LINE L2 3009 3056 -257 2828 187 131 133 chr2 166190775 166191373 -84496481 - L1MD3 LINE L1 -3 7992 7273 494 244 16 0 chr2 166191373 166191496 -84496358 - MLT1F1 LTR MaLR -442 125 1 2828 187 131 133 chr2 166191496 166191881 -84495973 - L1MD3 LINE L1 -722 7273 6889 282 302 17 70 chr2 166192011 166192038 -84495816 - L1M4 LINE L1 -1944 4202 4175 181 56 28 28 chr2 166192038 166192074 -84495780 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2415 75 0 0 chr2 166192076 166192368 -84495486 - AluY SINE Alu -19 292 1 282 302 17 70 chr2 166192368 166192509 -84495345 - L1M4 LINE L1 -1972 4174 4040 253 266 0 0 chr2 166192713 166192777 -84495077 - HsTC2 DNA Tc2 -604 1294 1231 350 303 118 84 chr2 166192911 166193267 -84494587 - L1M4 LINE L1 -2324 3822 3437 2252 113 0 0 chr2 166193267 166193577 -84494277 - AluSg SINE Alu 0 310 1 350 303 118 84 chr2 166193577 166193805 -84494049 - L1M4 LINE L1 -2709 3437 3218 731 307 51 18 chr2 166194410 166194684 -84493170 + LTR16B LTR ERVL 176 458 -6 192 40 0 0 chr2 166195033 166195058 -84492796 + (TC)n Simple_repeat Simple_repeat 2 26 0 258 136 0 0 chr2 166195058 166195102 -84492752 + (TG)n Simple_repeat Simple_repeat 2 45 0 869 185 113 5 chr2 166195683 166195878 -84491976 - MER20 DNA MER1_type 0 219 4 364 349 34 0 chr2 166196128 166196277 -84491577 - MIR3 SINE MIR -4 204 51 294 295 108 0 chr2 166197681 166197810 -84490044 - L1ME4a LINE L1 -12 6109 5967 1675 127 0 40 chr2 166197856 166198109 -84489745 + AluSq SINE Alu 2 244 -69 180 77 0 0 chr2 166198337 166198363 -84489491 + (GA)n Simple_repeat Simple_repeat 2 27 0 198 0 0 0 chr2 166199899 166199921 -84487933 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 2603 46 7 0 chr2 166200372 166200679 -84487175 + AluY SINE Alu 1 309 -2 263 308 88 76 chr2 166202167 166202563 -84485291 - MLT1K LTR MaLR 0 588 188 245 328 68 29 chr2 166202877 166203022 -84484832 + MIR3 SINE MIR 6 153 -67 765 57 0 19 chr2 166204302 166204408 -84483446 - L1PA5 LINE L1 -3 6151 6048 226 212 0 97 chr2 166204445 166204558 -84483296 + A-rich Low_complexity Low_complexity 3 104 0 3730 148 80 11 chr2 166204732 166205453 -84482401 + LTR1 LTR ERV1 12 782 -3 308 365 62 10 chr2 166205751 166205943 -84481911 + MIR SINE MIR 6 207 -55 384 250 313 10 chr2 166206048 166206240 -84481614 + MIR SINE MIR 10 259 -3 23 0 0 0 chr2 166206630 166206653 -84481201 + AT_rich Low_complexity Low_complexity 1 23 0 632 255 143 54 chr2 166207192 166207506 -84480348 - MLT1I LTR MaLR -67 342 1 249 360 0 0 chr2 166208271 166208360 -84479494 + GA-rich Low_complexity Low_complexity 2 90 0 1414 268 159 17 chr2 166209274 166209815 -84478039 - MLT2F LTR ERVL -45 618 1 26 30 0 0 chr2 166211233 166211266 -84476588 + AT_rich Low_complexity Low_complexity 1 33 0 267 54 0 0 chr2 166211547 166211584 -84476270 + (CA)n Simple_repeat Simple_repeat 2 38 0 255 278 65 42 chr2 166211796 166212059 -84475795 - L1MEc LINE L1 -3597 2618 2350 269 251 29 58 chr2 166212079 166212250 -84475604 - L1MEc LINE L1 -4081 2315 2150 30 83 0 0 chr2 166213306 166213378 -84474476 + AT_rich Low_complexity Low_complexity 1 72 0 361 182 13 13 chr2 166214264 166214341 -84473513 - MLT1K LTR MaLR 0 588 512 1777 144 74 0 chr2 166217099 166217383 -84470471 + AluSx SINE Alu 1 305 -7 3072 123 2 0 chr2 166217418 166217883 -84469971 + L1PA14 LINE L1 5695 6160 -1 2618 98 0 11 chr2 166218390 166218758 -84469096 + THE1B LTR MaLR 1 364 0 1333 213 28 31 chr2 166219226 166219517 -84468337 - AluJo SINE Alu -12 290 1 191 226 0 16 chr2 166220323 166220385 -84467469 + GA-rich Low_complexity Low_complexity 3 63 0 448 267 148 51 chr2 166221291 166221508 -84466346 + L2 LINE L2 3076 3313 0 21 0 0 0 chr2 166221947 166221968 -84465886 + AT_rich Low_complexity Low_complexity 1 21 0 5381 180 28 12 chr2 166223182 166225123 -84462731 + L1MB1 LINE L1 4195 6168 0 241 231 0 0 chr2 166227278 166227330 -84460524 + (TG)n Simple_repeat Simple_repeat 1 52 0 2146 129 10 0 chr2 166227359 166227662 -84460192 - AluSx SINE Alu -6 306 1 24 53 0 0 chr2 166227872 166227910 -84459944 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 166229829 166229850 -84458004 + AT_rich Low_complexity Low_complexity 1 21 0 214 310 0 0 chr2 166230181 166230252 -84457602 + MIR SINE MIR 183 253 -9 22 0 0 0 chr2 166233335 166233357 -84454497 + AT_rich Low_complexity Low_complexity 1 22 0 2315 168 10 27 chr2 166233608 166234095 -84453759 - L1MA6 LINE L1 -5 6295 5817 234 0 0 0 chr2 166234891 166234917 -84452937 + (T)n Simple_repeat Simple_repeat 1 26 0 429 227 7 57 chr2 166235219 166235367 -84452487 + MLT1E3 LTR MaLR 56 177 -447 851 173 17 4 chr2 166236623 166236862 -84450992 + GA-rich Low_complexity Low_complexity 1 242 0 230 229 14 29 chr2 166237028 166237047 -84450807 + A-rich Low_complexity Low_complexity 2 20 -50 2001 101 7 7 chr2 166237047 166237324 -84450530 + AluSx SINE Alu 35 311 -1 230 229 14 29 chr2 166237324 166237374 -84450480 + A-rich Low_complexity Low_complexity 20 70 0 243 0 0 0 chr2 166238059 166238086 -84449768 + (T)n Simple_repeat Simple_repeat 1 27 0 1303 231 182 28 chr2 166238354 166238909 -84448945 + MLT1E2 LTR MaLR 2 626 0 203 365 43 30 chr2 166238915 166239145 -84448709 + L2 LINE L2 2492 2724 -590 2123 101 0 0 chr2 166239657 166239933 -84447921 + AluSg SINE Alu 1 276 -34 791 61 30 15 chr2 166239933 166240064 -84447790 + (GAAA)n Simple_repeat Simple_repeat 3 135 0 374 343 4 37 chr2 166240233 166240310 -84447544 + HAL1 LINE L1 818 896 -1611 1721 152 0 7 chr2 166240310 166240579 -84447275 + AluSx SINE Alu 1 267 -45 374 343 4 37 chr2 166240579 166240772 -84447082 + HAL1 LINE L1 896 1079 -1428 * 767 283 125 27 chr2 166240747 166241266 -84446588 + HAL1 LINE L1 1315 1884 -623 790 236 11 0 chr2 166241440 166241618 -84446236 + L1MD3 LINE L1 7800 7979 -16 655 308 4 25 chr2 166242837 166243077 -84444777 + L1MC3 LINE L1 1062 1296 -5842 * 945 227 70 56 chr2 166243062 166243792 -84444062 + L1MC3 LINE L1 2462 3351 -3606 1401 263 49 14 chr2 166243797 166244429 -84443425 + L1MC3 LINE L1 3518 4171 -2786 4039 154 8 1 chr2 166244547 166245201 -84442653 + HERVH LTR ERV1 4492 5149 -2564 1305 131 23 14 chr2 166245198 166245419 -84442435 + HERVH LTR ERV1 5597 5819 -1894 * 2530 69 45 13 chr2 166245419 166245797 -84442057 + HERVH LTR ERV1 7324 7713 0 1385 152 110 65 chr2 166245797 166246226 -84441628 + LTR7 LTR ERV1 1 448 -2 1726 240 98 35 chr2 166246227 166246594 -84441260 + L1MC3 LINE L1 5318 5661 -1296 2277 102 0 7 chr2 166246594 166246899 -84440955 + AluSq SINE Alu 1 303 -10 1726 240 98 35 chr2 166246899 166247319 -84440535 + L1MC3 LINE L1 5661 6154 -803 1487 265 24 0 chr2 166247329 166247665 -84440189 + L1MEc LINE L1 10 353 -6506 1293 173 77 8 chr2 166247668 166247916 -84439938 + L1MEc LINE L1 670 934 -5925 1947 238 96 32 chr2 166247930 166248719 -84439135 + L1MEc LINE L1 994 1832 -5023 1137 195 24 4 chr2 166248709 166248960 -84438894 + L1MEc LINE L1 4468 4723 -2234 * 815 175 25 10 chr2 166248960 166249274 -84438580 + MSTC LTR MaLR 1 428 0 4396 232 46 33 chr2 166249274 166250794 -84437060 + L1MEc LINE L1 4719 6260 -745 1494 217 59 5 chr2 166250768 166251142 -84436712 + L1MB8 LINE L1 6592 6985 -4 * 2840 263 44 18 chr2 166251149 166252088 -84435766 + L1MC3 LINE L1 6139 7101 -1495 2991 214 51 8 chr2 166252092 166252891 -84434963 + L1MD1 LINE L1 4466 5299 -847 290 261 78 20 chr2 166252895 166253048 -84434806 + L1MD1 LINE L1 5757 5931 -311 * 3036 132 25 35 chr2 166252933 166253065 -84434789 + L1MA3 LINE L1 5757 5889 -416 3036 119 18 43 chr2 166253065 166253462 -84434392 + L1MA3 LINE L1 5757 6138 -167 1994 126 0 7 chr2 166253462 166253769 -84434085 + AluSx SINE Alu 1 305 0 3036 119 18 43 chr2 166253769 166253933 -84433921 + L1MA3 LINE L1 6138 6305 0 3036 132 25 35 chr2 166253933 166253952 -84433902 + L1MA3 LINE L1 5889 6305 0 22 35 0 0 chr2 166254013 166254042 -84433812 + AT_rich Low_complexity Low_complexity 1 29 0 32 67 0 0 chr2 166254059 166254119 -84433735 + AT_rich Low_complexity Low_complexity 1 60 0 33729 31 1 2 chr2 166254230 166259069 -84428785 + L1PA4 LINE L1 1304 6141 -14 1154 142 9 47 chr2 166259069 166259281 -84428573 + THE1B LTR MaLR 159 362 -2 11029 109 5 9 chr2 166259283 166260869 -84426985 + THE1B-int LTR MaLR 1 1580 0 2446 100 11 30 chr2 166260869 166261240 -84426614 + THE1B LTR MaLR 1 364 0 5515 172 11 20 chr2 166261412 166263185 -84424669 - L1PA16 LINE L1 0 6166 4410 1869 271 91 22 chr2 166263179 166264117 -84423737 + L1ME2 LINE L1 5178 6161 -3 * 22 0 0 0 chr2 166265743 166265765 -84422089 + AT_rich Low_complexity Low_complexity 1 22 0 227 53 0 53 chr2 166266383 166266421 -84421433 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 325 296 170 35 chr2 166266560 166266790 -84421064 - HAL1 LINE L1 -27 2480 2220 1213 271 134 63 chr2 166266847 166267782 -84420072 - HAL1 LINE L1 -301 2206 1206 764 313 99 10 chr2 166267807 166268111 -84419743 - HAL1 LINE L1 -1604 903 573 246 250 91 15 chr2 166268234 166268366 -84419488 + L1ME LINE L1 5597 5738 -383 355 216 12 17 chr2 166268553 166268730 -84419124 + GA-rich Low_complexity Low_complexity 1 176 0 13035 189 36 22 chr2 166269070 166270210 -84417644 - L1M2 LINE L1 -726 5574 4452 225 0 0 0 chr2 166270210 166270235 -84417619 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2214 86 0 0 chr2 166270236 166270515 -84417339 - AluY SINE Alu -32 279 1 13035 189 36 22 chr2 166270515 166272719 -84415135 - L1M2 LINE L1 -1847 4453 2183 245 139 0 0 chr2 166272719 166272762 -84415092 - L1 LINE L1 -3816 2330 2288 * 1140 211 11 3 chr2 166272758 166273043 -84414811 - L1 LINE L1 -3011 3371 3085 535 216 12 64 chr2 166273053 166273224 -84414630 - L1 LINE L1 -3802 2580 2419 * 990 237 18 48 chr2 166273223 166273380 -84414474 - L1 LINE L1 -3815 2567 2407 2205 98 0 57 chr2 166273380 166273698 -84414156 - AluSq SINE Alu -13 300 1 990 237 18 48 chr2 166273698 166274003 -84413851 - L1 LINE L1 -3975 2407 2116 225 316 18 9 chr2 166274130 166274244 -84413610 + L1ME4a LINE L1 4187 4301 -1845 874 245 94 24 chr2 166274267 166274639 -84413215 - L1M4 LINE L1 -985 5161 4764 26 101 0 0 chr2 166274698 166274787 -84413067 + AT_rich Low_complexity Low_complexity 1 89 0 282 276 35 21 chr2 166274829 166274974 -84412880 - L2 LINE L2 -746 2568 2422 338 251 40 91 chr2 166275018 166275217 -84412637 + L1ME4a LINE L1 5676 5864 -257 1713 177 93 3 chr2 166275249 166275605 -84412249 + L1MC1 LINE L1 5946 6333 0 876 172 13 0 chr2 166275754 166275992 -84411862 + GA-rich Low_complexity Low_complexity 1 241 0 206 241 17 17 chr2 166276572 166276630 -84411224 + MIR SINE MIR 132 189 -73 460 323 137 33 chr2 166278571 166278935 -84408919 + L1MEd LINE L1 589 914 -1576 1771 149 61 30 chr2 166278935 166279297 -84408557 - THE1C LTR MaLR -2 373 1 460 323 137 33 chr2 166279297 166279314 -84408540 + L1MEd LINE L1 914 928 -1562 19651 96 3 0 chr2 166279314 166282958 -84404896 + L1PA7 LINE L1 2501 6153 -1 460 323 137 33 chr2 166282958 166283275 -84404579 + L1MEd LINE L1 928 1441 -1049 2661 178 27 37 chr2 166283369 166283885 -84403969 - MER68 LTR ERV1 -51 511 1 312 343 62 19 chr2 166284017 166284227 -84403627 + L2 LINE L2 2130 2348 -966 716 261 32 18 chr2 166284319 166284599 -84403255 + L1M4 LINE L1 4229 4512 -1634 1279 185 97 62 chr2 166284599 166285032 -84402822 + LTR7 LTR ERV1 1 448 -2 20070 99 13 14 chr2 166285034 166288024 -84399830 + HERVH LTR ERV1 1 2987 -4726 949 127 7 0 chr2 166288018 166288168 -84399686 + HERVH LTR ERV1 3140 3290 -4423 * 2709 122 16 7 chr2 166288158 166288599 -84399255 + HERVH LTR ERV1 3492 3936 -3777 2050 270 42 30 chr2 166288705 166289624 -84398230 + L1M4 LINE L1 3386 4315 -1831 315 298 43 53 chr2 166290601 166290789 -84397065 + HAL1 LINE L1 2176 2361 -146 22 56 0 0 chr2 166290935 166290971 -84396883 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr2 166292102 166292133 -84395721 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 166294437 166294466 -84393388 + AT_rich Low_complexity Low_complexity 1 29 0 385 347 73 0 chr2 166295013 166295163 -84392691 - L2 LINE L2 -13 3300 3140 739 277 56 14 chr2 166296825 166297038 -84390816 + MIR SINE MIR 1 222 -40 219 268 127 0 chr2 166297238 166297309 -84390545 + MIR3 SINE MIR 98 177 -31 327 320 145 17 chr2 166297411 166297616 -84390238 - MIR SINE MIR -2 260 28 24 0 0 0 chr2 166297861 166297885 -84389969 + AT_rich Low_complexity Low_complexity 1 24 0 488 321 38 22 chr2 166299333 166299517 -84388337 + MIR SINE MIR 30 216 -46 1880 107 7 7 chr2 166299517 166299807 -84388047 - L1PA10 LINE L1 -815 5331 5042 * 5689 92 3 39 chr2 166299802 166300239 -84387615 + L1PA10 LINE L1 5347 5741 -427 1673 117 12 24 chr2 166300239 166300487 -84387367 + AluSg SINE Alu 64 308 -2 5689 92 3 39 chr2 166300487 166300897 -84386957 + L1PA10 LINE L1 5741 6164 -4 1143 197 117 33 chr2 166300915 166301279 -84386575 + MLT1E3 LTR MaLR 178 577 -47 773 79 9 0 chr2 166301280 166301394 -84386460 + (GGAA)n Simple_repeat Simple_repeat 1 115 0 216 321 291 0 chr2 166302065 166302199 -84385655 - L2 LINE L2 -6 3266 3094 2344 86 10 0 chr2 166302341 166302644 -84385210 - AluSg SINE Alu -4 306 1 1778 160 10 33 chr2 166302885 166303192 -84384662 + AluJb SINE Alu 1 300 -12 310 310 11 0 chr2 166303595 166303682 -84384172 - L2 LINE L2 0 3313 3226 648 178 42 0 chr2 166303770 166303888 -84383966 - MER63 DNA MER1_type -313 749 1 330 246 209 21 chr2 166304078 166304265 -84383589 - L2 LINE L2 -378 2936 2715 21 0 0 0 chr2 166306941 166306962 -84380892 + AT_rich Low_complexity Low_complexity 1 21 0 317 318 30 30 chr2 166308307 166308439 -84379415 + MIR SINE MIR 8 139 -123 30 83 0 0 chr2 166308439 166308511 -84379343 + AT_rich Low_complexity Low_complexity 1 72 0 445 265 67 59 chr2 166308761 166308906 -84378948 - MLT1K LTR MaLR 0 588 439 2162 92 3 7 chr2 166308906 166309201 -84378653 + AluSp SINE Alu 1 294 -19 445 265 67 59 chr2 166309201 166309293 -84378561 - MLT1K LTR MaLR -149 439 349 1209 241 4 4 chr2 166309326 166309575 -84378279 + MER58 DNA MER1_type 1 249 -2171 367 271 67 75 chr2 166309576 166309952 -84377902 + L1ME4a LINE L1 5524 5896 -225 669 317 124 38 chr2 166311603 166312305 -84375549 - L2 LINE L2 -3 3310 2560 2027 111 91 24 chr2 166312324 166312665 -84375189 - THE1B LTR MaLR 0 364 1 11539 101 4 1 chr2 166312670 166314239 -84373615 - THE1B-int LTR MaLR -6 1574 1 2041 120 88 20 chr2 166314239 166314580 -84373274 - THE1B LTR MaLR 0 364 1 1729 319 46 12 chr2 166314580 166315228 -84372626 - L2 LINE L2 -768 2546 1877 429 95 0 0 chr2 166315512 166315575 -84372279 + (CA)n Simple_repeat Simple_repeat 2 64 0 23 33 0 0 chr2 166315695 166315725 -84372129 + AT_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chr2 166316966 166317007 -84370847 + AT_rich Low_complexity Low_complexity 1 41 0 590 171 8 0 chr2 166317599 166317722 -84370132 + CT-rich Low_complexity Low_complexity 1 124 0 1582 181 0 44 chr2 166317722 166318042 -84369812 - AluJb SINE Alu -6 306 1 925 254 10 5 chr2 166319978 166320175 -84367679 - MER58A DNA MER1_type -1 223 26 1764 210 43 43 chr2 166320388 166320849 -84367005 + MLT1C LTR MaLR 7 467 0 1538 214 56 47 chr2 166320926 166321412 -84366442 - Charlie4a DNA MER1_type -17 491 2 29 0 0 0 chr2 166321796 166321825 -84366029 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr2 166322097 166322139 -84365715 + AT_rich Low_complexity Low_complexity 1 42 0 1975 127 45 10 chr2 166322820 166323134 -84364720 - MER7A DNA MER2_type -20 326 4 228 290 145 32 chr2 166323587 166323711 -84364143 - L2 LINE L2 -1 3312 3175 180 302 127 16 chr2 166328752 166328878 -84358976 + L2 LINE L2 1762 1901 -1413 228 135 0 0 chr2 166329258 166329295 -84358559 + (TA)n Simple_repeat Simple_repeat 2 38 0 540 287 97 43 chr2 166330898 166331105 -84356749 + L1M4 LINE L1 2261 2455 -3691 2365 92 0 0 chr2 166331105 166331411 -84356443 + AluSc SINE Alu 1 306 -3 540 287 97 43 chr2 166331411 166332037 -84355817 + L1M4 LINE L1 2455 3139 -3007 1315 165 27 0 chr2 166332091 166332315 -84355539 + AluSg/x SINE Alu 71 300 -12 339 259 109 38 chr2 166332354 166332775 -84355079 + L1M4 LINE L1 3164 3614 -2532 1242 216 63 116 chr2 166333069 166333639 -84354215 - MLT1F LTR MaLR 0 542 3 6904 68 239 8 chr2 166333792 166334897 -84352957 + L1P LINE L1 1 1360 -4786 388 284 35 0 chr2 166335069 166335185 -84352669 - Zaphod DNA AcHobo -3860 171 52 1913 209 14 69 chr2 166335259 166335767 -84352087 - MLT1D LTR MaLR -22 483 4 2551 148 52 70 chr2 166335768 166336341 -84351513 - MER34B LTR ERV1 -2 563 1 806 337 8 35 chr2 166336348 166336722 -84351132 - MLT1I LTR MaLR -6 403 40 508 334 136 56 chr2 166336771 166337145 -84350709 + L1MEd LINE L1 59 462 -5657 380 375 102 3 chr2 166337168 166337493 -84350361 - L1 LINE L1 -3595 2551 2195 269 193 181 48 chr2 166337534 166337750 -84350104 + L1MC/D LINE L1 5176 5422 -742 267 223 108 45 chr2 166337830 166338013 -84349841 + L1MC/D LINE L1 5628 5814 -320 22 56 0 0 chr2 166338154 166338190 -84349664 + AT_rich Low_complexity Low_complexity 1 36 0 33 25 0 0 chr2 166338401 166338441 -84349413 + AT_rich Low_complexity Low_complexity 1 40 0 237 267 47 23 chr2 166339200 166339286 -84348568 + L2 LINE L2 3216 3303 -10 348 236 30 79 chr2 166340915 166341080 -84346774 + MER103 DNA DNA 3 159 -7 183 80 0 0 chr2 166341096 166341121 -84346733 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 82 0 0 chr2 166341656 166341705 -84346149 + AT_rich Low_complexity Low_complexity 1 49 0 262 355 136 0 chr2 166342802 166342971 -84344883 + MIR SINE MIR 68 259 -3 428 327 97 35 chr2 166343479 166343621 -84344233 + MIR SINE MIR 15 178 -84 195 69 0 0 chr2 166343621 166343650 -84344204 + (TG)n Simple_repeat Simple_repeat 2 30 0 428 327 97 35 chr2 166343650 166343733 -84344121 + MIR SINE MIR 178 254 -8 227 280 0 0 chr2 166343749 166343799 -84344055 - MIR SINE MIR -162 100 51 5082 183 83 88 chr2 166344140 166344720 -84343134 - L1MC3 LINE L1 -9 7776 7195 284 274 36 12 chr2 166344720 166344804 -84343050 - MLT1F1 LTR MaLR -437 130 45 5082 183 83 88 chr2 166344804 166345571 -84342283 - L1MC3 LINE L1 -590 7195 6353 2104 137 32 0 chr2 166345568 166345941 -84341913 - L1M4c LINE L1 -4993 1391 1007 * 463 137 20 20 chr2 166345922 166345944 -84341910 - L1P5 LINE L1 -475 5681 5660 * 2226 143 69 2 chr2 166345944 166346350 -84341504 - L1PB4 LINE L1 0 6156 5724 463 137 20 20 chr2 166346350 166346429 -84341425 - L1P5 LINE L1 -495 5661 5580 329 289 72 7 chr2 166346755 166346907 -84340947 + HAL1 LINE L1 2061 2222 -285 192 182 0 0 chr2 166346934 166346978 -84340876 + (TATG)n Simple_repeat Simple_repeat 2 45 0 399 249 36 18 chr2 166346981 166347146 -84340708 + HAL1 LINE L1 2231 2398 -109 972 258 50 74 chr2 166347935 166348040 -84339814 - L1M4 LINE L1 -1394 4752 4646 1474 172 7 36 chr2 166348040 166348342 -84339512 - AluJo SINE Alu -19 293 1 972 258 50 74 chr2 166348342 166348622 -84339232 - L1M4 LINE L1 -1500 4646 4361 300 70 0 0 chr2 166348622 166348665 -84339189 + (TG)n Simple_repeat Simple_repeat 2 44 0 565 213 56 0 chr2 166348667 166348775 -84339079 - FLAM_C SINE Alu -18 115 2 972 258 50 74 chr2 166348775 166349064 -84338790 - L1M4 LINE L1 -1786 4360 4090 626 206 52 0 chr2 166349064 166349200 -84338654 - AluJb SINE Alu -4 308 166 454 252 112 0 chr2 166349513 166349656 -84338198 + MER3 DNA MER1_type 45 203 -6 389 291 59 44 chr2 166349761 166349964 -84337890 + MER46C DNA MER2_type 67 272 -66 236 279 9 18 chr2 166349967 166350078 -84337776 + (TA)n Simple_repeat Simple_repeat 1 110 0 5419 189 32 28 chr2 166350082 166351624 -84336230 - L1P5 LINE L1 -568 6291 4742 3568 258 55 18 chr2 166351646 166353067 -84334787 - L1P5 LINE L1 -3491 3358 1900 1249 85 18 0 chr2 166353098 166353263 -84334591 - AluY SINE Alu -11 300 133 2459 52 13 20 chr2 166353263 166353568 -84334286 - AluY SINE Alu -8 303 1 5861 259 46 23 chr2 166353586 166355565 -84332289 - L1P5 LINE L1 -4965 1884 2 5326 167 24 26 chr2 166355565 166356582 -84331272 - L1M4c LINE L1 -5352 1032 18 4112 248 98 56 chr2 166356606 166360346 -84327508 - L1MCa LINE L1 -1886 4678 783 307 299 32 19 chr2 166360416 166360573 -84327281 - L1MCa LINE L1 -5480 565 407 2074 281 32 30 chr2 166360576 166361302 -84326552 - L1MCb LINE L1 -5316 729 3 271 271 111 28 chr2 166361411 166361555 -84326299 - L2 LINE L2 -167 3146 2991 661 368 69 26 chr2 166361624 166362200 -84325654 - L2 LINE L2 -433 2881 2281 1802 155 35 58 chr2 166364289 166364688 -84323166 + MLT1B LTR MaLR 1 390 0 33 56 0 0 chr2 166365163 166365217 -84322637 + AT_rich Low_complexity Low_complexity 1 54 0 315 276 13 0 chr2 166365870 166365946 -84321908 + CT-rich Low_complexity Low_complexity 1 77 0 328 264 107 16 chr2 166366207 166366328 -84321526 - MIR SINE MIR -108 154 23 377 303 57 57 chr2 166366596 166367408 -84320446 - L1MDa LINE L1 -2961 3579 2768 322 278 19 78 chr2 166367588 166367793 -84320061 - L1MDa LINE L1 -3980 2560 2368 318 334 30 41 chr2 166368182 166368544 -84319310 - HAL1 LINE L1 -865 1642 1285 783 300 88 45 chr2 166369383 166369911 -84317943 + HAL1b LINE L1 88 651 -697 2382 74 3 3 chr2 166369911 166370222 -84317632 - AluY SINE Alu 0 311 1 783 300 88 45 chr2 166370222 166370340 -84317514 + HAL1b LINE L1 651 762 -586 338 341 34 26 chr2 166370489 166370753 -84317101 + MLT1L LTR MaLR 1 266 -349 198 0 0 0 chr2 166370768 166370790 -84317064 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 3408 180 53 69 chr2 166370793 166371723 -84316131 - L1MB7 LINE L1 -9 6175 5263 3138 108 30 16 chr2 166371728 166372220 -84315634 - L1PA14 LINE L1 -9 6152 5654 344 25 0 0 chr2 166372220 166372260 -84315594 - MLT2A2 LTR ERVL -1 452 413 198 0 0 0 chr2 166372261 166372283 -84315571 + (TA)n Simple_repeat Simple_repeat 2 23 0 270 81 0 0 chr2 166372325 166372362 -84315492 - HERVL LTR ERVL -2565 3089 3053 25 0 0 0 chr2 166372387 166372412 -84315442 + AT_rich Low_complexity Low_complexity 1 25 0 22 99 0 0 chr2 166372443 166372514 -84315340 + AT_rich Low_complexity Low_complexity 1 71 0 951 118 40 7 chr2 166372532 166372684 -84315170 - MLT2A2 LTR ERVL -50 403 247 10984 134 18 28 chr2 166372697 166374537 -84313317 - L1PA12 LINE L1 -4464 3120 1296 326 266 62 9 chr2 166374540 166374653 -84313201 + L1ME4a LINE L1 4932 5050 -1096 1917 148 19 40 chr2 166374694 166375066 -84312788 - THE1B LTR MaLR 0 364 1 281 67 0 22 chr2 166375216 166375261 -84312593 + (TA)n Simple_repeat Simple_repeat 1 44 0 317 304 20 54 chr2 166375537 166375685 -84312169 + MIR SINE MIR 49 191 -71 22 0 0 0 chr2 166375802 166375824 -84312030 + AT_rich Low_complexity Low_complexity 1 22 0 1283 221 41 39 chr2 166377602 166377991 -84309863 - MLT1B LTR MaLR 0 390 1 239 167 21 0 chr2 166378338 166378386 -84309468 + (CA)n Simple_repeat Simple_repeat 2 50 0 230 307 68 55 chr2 166378439 166378602 -84309252 - L2 LINE L2 -505 2809 2645 180 0 0 0 chr2 166378914 166378934 -84308920 + (TA)n Simple_repeat Simple_repeat 2 21 0 1951 109 4 4 chr2 166378937 166379203 -84308651 - AluSg SINE Alu -19 291 26 262 351 98 25 chr2 166379338 166379583 -84308271 + L3 LINE CR1 996 1258 -319 183 254 111 0 chr2 166380336 166380399 -84307455 + L2 LINE L2 3202 3271 -1 2038 121 3 3 chr2 166380967 166381256 -84306598 - AluSx SINE Alu -23 289 1 189 333 0 0 chr2 166382029 166382074 -84305780 + L2 LINE L2 2999 3043 -229 542 242 134 6 chr2 166382579 166382736 -84305118 + MIR3 SINE MIR 19 195 -13 23 54 0 0 chr2 166383588 166383625 -84304229 + AT_rich Low_complexity Low_complexity 1 37 0 206 351 185 9 chr2 166383634 166383845 -84304009 + L3 LINE CR1 1264 1511 -66 211 200 0 22 chr2 166384592 166384637 -84303217 + CT-rich Low_complexity Low_complexity 4 47 0 738 217 118 0 chr2 166385403 166385564 -84302290 + MER5A DNA MER1_type 1 180 -9 460 288 144 11 chr2 166386124 166386402 -84301452 + L1ME4a LINE L1 5382 5696 -425 478 259 12 12 chr2 166386428 166386594 -84301260 + L1ME4a LINE L1 5743 5908 -213 623 40 0 0 chr2 166386649 166386724 -84301130 - L1PA4 LINE L1 -344 5811 5737 2845 50 33 0 chr2 166386724 166387085 -84300769 + L1PA4 LINE L1 5779 6153 -2 397 332 124 10 chr2 166387178 166387371 -84300483 + L2 LINE L2 2762 2976 -338 342 287 33 113 chr2 166387596 166387845 -84300009 - MER41B LTR ERV1 -202 433 53 241 279 176 62 chr2 166388004 166388276 -84299578 + L2 LINE L2 2986 3288 -25 390 244 17 43 chr2 166388845 166388960 -84298894 + MER77 LTR ERV1 85 196 -409 * 1328 274 71 45 chr2 166388932 166389539 -84298315 + MER21B LTR ERV1 96 718 -145 458 291 75 91 chr2 166390878 166391143 -84296711 - MIR SINE MIR 0 262 2 211 178 55 14 chr2 166391441 166391514 -84296340 + (TA)n Simple_repeat Simple_repeat 2 77 0 565 267 49 12 chr2 166391514 166391761 -84296093 - Tigger8 DNA MER2_type -149 517 262 2255 125 0 0 chr2 166391785 166392090 -84295764 - AluSq SINE Alu -8 305 1 2907 152 20 48 chr2 166392916 166393117 -84294737 - L1PB4 LINE L1 -8 6148 5638 2344 113 0 0 chr2 166393117 166393427 -84294427 - AluSx SINE Alu -2 310 1 2762 184 14 97 chr2 166393427 166394200 -84293654 - L1MA8 LINE L1 -323 5968 5260 23 0 0 0 chr2 166396160 166396183 -84291671 + AT_rich Low_complexity Low_complexity 1 23 0 2432 113 10 51 chr2 166396319 166396686 -84291168 + THE1C LTR MaLR 1 353 -22 1811 128 70 56 chr2 166396686 166397045 -84290809 - THE1B LTR MaLR 0 364 1 2432 113 10 51 chr2 166397045 166397068 -84290786 + THE1C LTR MaLR 353 375 0 8874 135 69 14 chr2 166397068 166397381 -84290473 + THE1C-int LTR MaLR 1 295 -1285 2029 153 0 0 chr2 166397381 166397675 -84290179 - AluSx SINE Alu -18 294 1 8874 135 69 14 chr2 166397675 166398859 -84288995 + THE1C-int LTR MaLR 295 1580 0 2346 121 27 16 chr2 166398859 166399230 -84288624 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr2 166399696 166399718 -84288136 + AT_rich Low_complexity Low_complexity 1 22 0 190 314 119 34 chr2 166399760 166399878 -84287976 + MIR SINE MIR 99 226 -36 868 304 12 8 chr2 166399881 166400131 -84287723 - MIR SINE MIR -10 252 2 284 206 16 0 chr2 166400349 166400412 -84287442 + L1 LINE L1 2555 2618 -4231 1544 276 14 20 chr2 166400559 166401109 -84286745 + L1 LINE L1 2836 3382 -3466 * 3070 203 21 24 chr2 166401106 166401855 -84285999 + L1 LINE L1 4741 5487 -1361 1696 66 0 82 chr2 166402117 166402374 -84285480 - AluY SINE Alu 0 311 76 346 246 232 21 chr2 166403988 166404130 -84283724 - MER5A DNA MER1_type 0 189 18 198 237 153 17 chr2 166404932 166404991 -84282863 + L3b LINE CR1 1504 1570 -13 23 0 0 0 chr2 166405407 166405430 -84282424 + AT_rich Low_complexity Low_complexity 1 23 0 193 290 97 32 chr2 166405917 166406010 -84281844 + L2 LINE L2 3215 3313 0 324 0 0 0 chr2 166407361 166407397 -84280457 + (TG)n Simple_repeat Simple_repeat 1 36 0 2021 125 0 14 chr2 166407983 166408280 -84279574 + AluSq SINE Alu 1 293 -20 421 299 138 22 chr2 166409229 166409453 -84278401 - MIR SINE MIR -12 250 1 863 271 54 19 chr2 166410898 166411215 -84276639 - L1M4 LINE L1 -1847 4299 3972 492 175 35 0 chr2 166411209 166411323 -84276531 + L1M4 LINE L1 4321 4438 -1708 * 1719 149 102 18 chr2 166411323 166411658 -84276196 + L1PB4 LINE L1 5794 6156 0 303 369 49 0 chr2 166411841 166411963 -84275891 + L2 LINE L2 3145 3272 0 199 289 23 62 chr2 166412375 166412503 -84275351 - MIR SINE MIR -42 220 98 199 358 98 16 chr2 166412557 166412680 -84275174 + MIR SINE MIR 20 152 -110 1115 198 18 9 chr2 166415019 166415241 -84272613 + AluJo SINE Alu 78 301 -11 245 98 24 0 chr2 166416790 166416831 -84271023 + (TCTCC)n Simple_repeat Simple_repeat 1 42 0 219 226 19 38 chr2 166417698 166417751 -84270103 + MIR SINE MIR 211 262 0 21 0 0 0 chr2 166418127 166418148 -84269706 + AT_rich Low_complexity Low_complexity 1 21 0 1118 274 71 35 chr2 166418547 166419070 -84268784 + MLT1G LTR MaLR 1 503 -87 35 54 0 0 chr2 166419283 166419339 -84268515 + AT_rich Low_complexity Low_complexity 1 56 0 764 261 66 30 chr2 166419892 166420256 -84267598 - L1M4 LINE L1 -2181 3965 3589 406 344 118 14 chr2 166420394 166420868 -84266986 - L1M4 LINE L1 -2713 3433 2906 2008 101 7 7 chr2 166421601 166421930 -84265924 - AluSx SINE Alu 0 363 35 554 313 30 16 chr2 166422079 166422383 -84265471 - HAL1b LINE L1 -734 614 307 2499 61 0 3 chr2 166423743 166424055 -84263799 + AluY SINE Alu 1 311 0 280 322 112 0 chr2 166425512 166425655 -84262199 - MIR SINE MIR -98 164 6 1010 225 83 17 chr2 166427935 166428286 -84259568 - L1M4 LINE L1 -1286 4860 4487 7222 134 15 5 chr2 166428385 166428884 -84258970 + L1MA1 LINE L1 4675 5167 -1135 1702 175 11 3 chr2 166428884 166429170 -84258684 + AluSx SINE Alu 1 288 -24 7222 134 15 5 chr2 166429170 166430280 -84257574 + L1MA1 LINE L1 5167 6302 0 819 207 12 122 chr2 166430301 166430592 -84257262 + MLT1H1 LTR MaLR 289 536 -6 473 260 127 78 chr2 166431651 166431959 -84255895 + MLT1A1-int LTR MaLR 1034 1707 -28 9732 190 51 62 chr2 166432000 166433413 -84254441 + L1MC3 LINE L1 4407 5833 -1952 1659 224 25 6 chr2 166433413 166433771 -84254083 + MLT1A1 LTR MaLR 1 365 0 9732 190 51 62 chr2 166433771 166435769 -84252085 + L1MC3 LINE L1 5833 7778 -7 1990 116 7 0 chr2 166435769 166436053 -84251801 + AluY SINE Alu 1 286 -25 30 0 0 0 chr2 166436053 166436083 -84251771 + AT_rich Low_complexity Low_complexity 1 30 0 1053 240 26 60 chr2 166436092 166436442 -84251412 + L1ME1 LINE L1 4695 5032 -1114 361 344 32 60 chr2 166436808 166437090 -84250764 - L2 LINE L2 -1321 1993 1720 1475 263 82 8 chr2 166437355 166437841 -84250013 + L1ME1 LINE L1 5639 6160 -6 198 369 0 24 chr2 166437874 166437958 -84249896 - L2 LINE L2 -3154 160 79 26 0 0 0 chr2 166438495 166438521 -84249333 + AT_rich Low_complexity Low_complexity 1 26 0 1847 152 24 27 chr2 166440683 166441059 -84246795 - THE1C LTR MaLR 0 375 1 9637 123 56 6 chr2 166441059 166442564 -84245290 - THE1C-int LTR MaLR 0 1580 1 1873 144 41 35 chr2 166442564 166442932 -84244922 - THE1C LTR MaLR 0 375 6 1151 283 87 15 chr2 166442943 166443413 -84244441 + Charlie7 DNA MER1_type 67 570 -2042 274 235 126 53 chr2 166443461 166443708 -84244146 + Charlie7 DNA MER1_type 2347 2611 -1 26 30 0 0 chr2 166443783 166443816 -84244038 + AT_rich Low_complexity Low_complexity 1 33 0 212 359 122 0 chr2 166443826 166443982 -84243872 + L3 LINE CR1 320 494 -1083 1012 294 174 24 chr2 166444034 166444574 -84243280 + L2 LINE L2 884 1504 -1810 634 239 18 18 chr2 166444620 166444783 -84243071 - LTR40b LTR ERVL 0 462 300 1147 198 83 68 chr2 166444796 166445171 -84242683 + MLT2D LTR ERVL 1 479 -41 1290 258 25 34 chr2 166445244 166445601 -84242253 - LTR40a LTR ERVL -164 355 2 197 160 0 60 chr2 166445603 166445653 -84242201 + L2 LINE L2 1538 1584 -1730 241 195 0 0 chr2 166445663 166445704 -84242150 + L2 LINE L2 2661 2701 -613 3451 279 82 49 chr2 166445710 166446048 -84241806 + L2 LINE L2 1561 1886 -1427 1902 180 11 16 chr2 166446048 166446415 -84241439 - MLT1A1 LTR MaLR 0 365 1 3451 279 82 49 chr2 166446415 166447766 -84240088 + L2 LINE L2 1886 3300 -13 289 290 99 27 chr2 166447767 166447988 -84239866 + L1MC1 LINE L1 5761 5997 -336 * 2318 154 58 41 chr2 166447804 166448064 -84239790 + L1MA10 LINE L1 5812 6066 -268 1915 119 54 48 chr2 166448064 166448399 -84239455 - MER1B DNA MER1_type 0 337 1 2318 154 58 41 chr2 166448399 166448653 -84239201 + L1MA10 LINE L1 6066 6334 0 185 269 32 21 chr2 166448697 166448790 -84239064 + L2 LINE L2 2890 2983 -289 322 348 14 7 chr2 166449180 166449321 -84238533 + L3 LINE CR1 1418 1559 -18 23 0 0 0 chr2 166450208 166450231 -84237623 + AT_rich Low_complexity Low_complexity 1 23 0 516 123 0 0 chr2 166450979 166451052 -84236802 + MADE1 DNA Mariner 8 80 0 27 29 0 0 chr2 166451055 166451089 -84236765 + AT_rich Low_complexity Low_complexity 1 34 0 267 152 0 0 chr2 166451106 166451152 -84236702 + (TA)n Simple_repeat Simple_repeat 2 47 0 233 209 0 0 chr2 166451778 166451821 -84236033 + GA-rich Low_complexity Low_complexity 2 44 0 246 160 0 0 chr2 166452011 166452061 -84235793 + (TA)n Simple_repeat Simple_repeat 1 50 0 26 30 0 0 chr2 166452081 166452114 -84235740 + AT_rich Low_complexity Low_complexity 1 33 0 290 109 36 0 chr2 166452605 166452660 -84235194 + CT-rich Low_complexity Low_complexity 3 59 0 323 257 124 29 chr2 166460973 166461078 -84226776 - L2 LINE L2 -1 3271 3157 48 72 0 0 chr2 166462742 166462839 -84225015 + AT_rich Low_complexity Low_complexity 1 97 0 21 0 0 0 chr2 166464085 166464106 -84223748 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 166465168 166465189 -84222665 + AT_rich Low_complexity Low_complexity 1 21 0 2268 123 47 3 chr2 166466068 166466427 -84221427 + THE1C LTR MaLR 1 375 0 22 35 0 0 chr2 166467150 166467179 -84220675 + AT_rich Low_complexity Low_complexity 1 29 0 180 279 15 118 chr2 166468847 166468903 -84218951 + L2 LINE L2 3191 3251 -62 234 0 0 0 chr2 166468903 166468929 -84218925 + (TAG)n Simple_repeat Simple_repeat 1 26 0 180 279 15 118 chr2 166468929 166469008 -84218846 + L2 LINE L2 3251 3312 -1 368 215 99 37 chr2 166469828 166469979 -84217875 - MIR SINE MIR -56 206 44 184 250 66 13 chr2 166469987 166470063 -84217791 - L2 LINE L2 -86 3227 3148 324 394 88 43 chr2 166470234 166470458 -84217396 - L2 LINE L2 -450 2864 2652 350 203 13 0 chr2 166470458 166470537 -84217317 + MER116 DNA Mariner 1 80 0 324 394 88 43 chr2 166470537 166470777 -84217077 - L2 LINE L2 -662 2652 2379 349 258 41 10 chr2 166472092 166472189 -84215665 - MIR SINE MIR -97 165 66 2067 116 7 0 chr2 166472407 166472692 -84215162 - AluSc SINE Alu -19 290 4 387 0 0 0 chr2 166473538 166473581 -84214273 + (TA)n Simple_repeat Simple_repeat 2 44 0 725 306 39 20 chr2 166474558 166474656 -84213198 - MIR SINE MIR 0 262 167 799 183 12 108 chr2 166474656 166474897 -84212957 + MER20 DNA MER1_type 2 219 0 725 306 39 20 chr2 166474897 166475053 -84212801 - MIR SINE MIR -95 167 3 2506 61 0 3 chr2 166476145 166476456 -84211398 + AluY SINE Alu 1 310 -1 209 184 0 0 chr2 166477181 166477219 -84210635 + (CA)n Simple_repeat Simple_repeat 2 39 0 2291 59 0 0 chr2 166478318 166478590 -84209264 + AluSc SINE Alu 29 300 -9 430 174 153 0 chr2 166479716 166479814 -84208040 - MER105 DNA DNA -64 140 28 1078 270 156 35 chr2 166480393 166480978 -84206876 + L2 LINE L2 2398 3049 -264 601 318 52 6 chr2 166481443 166481616 -84206238 - MIR3 SINE MIR -16 192 12 232 261 0 0 chr2 166482014 166482079 -84205775 + (TA)n Simple_repeat Simple_repeat 1 65 0 1696 184 3 7 chr2 166482712 166483016 -84204838 + AluJo SINE Alu 1 303 -9 273 255 48 48 chr2 166484805 166484950 -84202904 - MER117 DNA MER1_type -50 147 3 22 35 0 0 chr2 166485446 166485475 -84202379 + AT_rich Low_complexity Low_complexity 1 29 0 663 89 0 20 chr2 166486022 166486123 -84201731 - MIR3 SINE MIR -1 207 109 204 40 0 0 chr2 166486178 166486203 -84201651 + (T)n Simple_repeat Simple_repeat 1 25 0 3222 52 0 70 chr2 166486606 166487088 -84200766 + LTR7 LTR ERV1 1 448 -2 19427 95 45 8 chr2 166487090 166489978 -84197876 + HERVH LTR ERV1 1 2995 -4718 974 120 7 0 chr2 166489957 166490107 -84197747 + HERVH LTR ERV1 3140 3290 -4423 * 3374 120 0 6 chr2 166490097 166490604 -84197250 + HERVH LTR ERV1 3492 3995 -3718 989 71 0 0 chr2 166490604 166490731 -84197123 + HERVH LTR ERV1 4488 4614 -3099 582 249 106 5 chr2 166490731 166490920 -84196934 - L1ME LINE L1 -654 5512 5305 361 325 80 43 chr2 166491283 166491471 -84196383 + MER91A DNA MER1_type 2 196 0 836 207 50 15 chr2 166492318 166492516 -84195338 - MLT1A1 LTR MaLR 0 365 161 306 252 87 17 chr2 166492532 166492647 -84195207 - MLT1A1 LTR MaLR -171 194 72 2794 66 11 0 chr2 166492684 166493049 -84194805 - L1PA13 LINE L1 -30 6133 5765 408 161 62 0 chr2 166493049 166493130 -84194724 - MLT1A1 LTR MaLR -279 86 1 355 285 108 49 chr2 166493153 166493501 -84194353 + L2 LINE L2 2690 3051 -221 2532 72 0 3 chr2 166493683 166493990 -84193864 - AluSq SINE Alu -7 306 1 362 317 102 59 chr2 166494311 166494518 -84193336 - L2 LINE L2 -100 3213 3016 1795 156 17 3 chr2 166494518 166494806 -84193048 + AluSq SINE Alu 3 294 -19 362 317 102 59 chr2 166494806 166495131 -84192723 - L2 LINE L2 -297 3016 2664 672 241 35 30 chr2 166496160 166496359 -84191495 - MIR SINE MIR -61 201 2 555 335 87 0 chr2 166496533 166496763 -84191091 + MIR SINE MIR 2 251 -11 180 0 0 0 chr2 166498096 166498116 -84189738 + (T)n Simple_repeat Simple_repeat 1 20 0 504 299 25 14 chr2 166498356 166498634 -84189220 + L1ME LINE L1 4573 4853 -1293 207 0 0 0 chr2 166498714 166498737 -84189117 + (TAA)n Simple_repeat Simple_repeat 2 24 0 2399 81 0 10 chr2 166498803 166499110 -84188744 + AluY SINE Alu 1 304 -7 374 264 104 49 chr2 166499183 166499657 -84188197 + L1ME LINE L1 5149 5647 -520 198 0 0 0 chr2 166499837 166499859 -84187995 + (CA)n Simple_repeat Simple_repeat 1 22 0 21 0 0 0 chr2 166500153 166500174 -84187680 + AT_rich Low_complexity Low_complexity 1 21 0 257 266 87 75 chr2 166500723 166500896 -84186958 - MLT1I LTR MaLR -2 407 233 233 186 34 0 chr2 166503050 166503109 -84184745 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 353 390 48 0 chr2 166503368 166503514 -84184340 + L2 LINE L2 3116 3268 -4 251 219 42 16 chr2 166504406 166504486 -84183368 - MIR SINE MIR -78 130 43 640 72 50 7 chr2 166504621 166504760 -84183094 + (TAGA)n Simple_repeat Simple_repeat 1 145 0 274 333 128 7 chr2 166505650 166505791 -84182063 + MIR SINE MIR 102 259 -3 258 307 139 10 chr2 166507175 166507276 -84180578 + MER5A DNA MER1_type 3 116 -73 325 228 8 110 chr2 166507592 166507719 -84180135 + L1ME4a LINE L1 5997 6110 -11 305 82 20 0 chr2 166507821 166507870 -84179984 + (CAT)n Simple_repeat Simple_repeat 3 52 0 393 323 98 51 chr2 166509152 166509468 -84178386 + L2 LINE L2 2646 2976 -338 2187 112 13 0 chr2 166509831 166510135 -84177719 + AluSg SINE Alu 3 310 0 253 227 92 30 chr2 166510314 166510450 -84177404 - L1P5 LINE L1 -722 5434 5292 2168 87 102 15 chr2 166510583 166510918 -84176936 + THE1B LTR MaLR 1 364 0 219 103 0 0 chr2 166511364 166511403 -84176451 + (A)n Simple_repeat Simple_repeat 1 39 0 1732 148 57 15 chr2 166512327 166512658 -84175196 - Tigger7 DNA MER2_type 0 2487 2143 1563 190 0 7 chr2 166512656 166512930 -84174924 + Tigger7 DNA MER2_type 75 346 -204 * 524 367 47 56 chr2 166513251 166513592 -84174262 - L2 LINE L2 0 3272 2935 658 311 145 51 chr2 166513624 166514480 -84173374 - L2 LINE L2 -557 2757 1822 315 206 0 15 chr2 166516345 166516413 -84171441 + Charlie4 DNA MER1_type 1888 1954 -7 324 48 0 0 chr2 166517017 166517059 -84170795 + (CA)n Simple_repeat Simple_repeat 2 43 0 35 24 0 0 chr2 166518287 166518329 -84169525 + AT_rich Low_complexity Low_complexity 1 42 0 212 167 0 24 chr2 166519736 166519778 -84168076 + (CA)n Simple_repeat Simple_repeat 2 42 0 185 0 40 0 chr2 166519907 166519932 -84167922 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2039 122 35 0 chr2 166520825 166521112 -84166742 - AluSx SINE Alu -15 297 1 27 62 0 0 chr2 166521209 166521257 -84166597 + AT_rich Low_complexity Low_complexity 1 48 0 195 304 63 63 chr2 166522660 166522739 -84165115 - L2 LINE L2 0 3272 3194 229 248 208 10 chr2 166525762 166525863 -84161991 - MIR3 SINE MIR -21 187 67 28 29 0 0 chr2 166526903 166526938 -84160916 + AT_rich Low_complexity Low_complexity 1 35 0 25 65 0 0 chr2 166527861 166527907 -84159947 + AT_rich Low_complexity Low_complexity 1 46 0 230 256 0 13 chr2 166528018 166528096 -84159758 + (TATAA)n Simple_repeat Simple_repeat 4 80 0 231 88 0 0 chr2 166529037 166529071 -84158783 + (A)n Simple_repeat Simple_repeat 1 34 0 288 0 0 0 chr2 166529310 166529342 -84158512 + (A)n Simple_repeat Simple_repeat 1 32 0 25 0 0 0 chr2 166529456 166529481 -84158373 + AT_rich Low_complexity Low_complexity 1 25 0 297 0 0 0 chr2 166529861 166529894 -84157960 + (A)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr2 166530010 166530032 -84157822 + AT_rich Low_complexity Low_complexity 1 22 0 375 245 117 0 chr2 166530690 166530784 -84157070 + L1MDb LINE L1 9 113 -6296 294 182 13 39 chr2 166530810 166530887 -84156967 + L1MDb LINE L1 316 390 -6019 1873 202 64 25 chr2 166531117 166531603 -84156251 + MLT1D LTR MaLR 1 505 0 319 244 148 0 chr2 166531739 166531854 -84156000 + HsTC2 DNA Tc2 4 135 -1763 267 229 16 0 chr2 166531853 166531914 -84155940 + HsTC2 DNA Tc2 1251 1312 -586 * 496 261 15 0 chr2 166531930 166532060 -84155794 + HsTC2 DNA Tc2 1569 1700 -198 255 257 27 0 chr2 166532061 166532135 -84155719 + (TATATG)n Simple_repeat Simple_repeat 1 76 0 541 222 19 48 chr2 166532137 166532344 -84155510 + HsTC2 DNA Tc2 1698 1898 0 3021 162 79 64 chr2 166532809 166533530 -84154324 + L1MB5 LINE L1 5442 6173 -1 22 70 0 0 chr2 166535477 166535520 -84152334 + AT_rich Low_complexity Low_complexity 1 43 0 686 174 181 0 chr2 166536060 166536209 -84151645 + MER5A DNA MER1_type 14 189 0 198 0 0 0 chr2 166536210 166536232 -84151622 + (A)n Simple_repeat Simple_repeat 1 22 0 8261 149 31 95 chr2 166536995 166538548 -84149306 + L1M1 LINE L1 9 1660 -5905 222 37 0 0 chr2 166538548 166538575 -84149279 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2231 104 0 0 chr2 166538578 166538867 -84148987 - AluSq SINE Alu -24 289 1 8261 149 31 95 chr2 166538867 166539044 -84148810 + L1M1 LINE L1 1445 1632 -5933 209 274 9 0 chr2 166539485 166539591 -84148263 + CT-rich Low_complexity Low_complexity 1 107 0 647 232 88 45 chr2 166539681 166539955 -84147899 + MLT1D LTR MaLR 1 262 -128 400 340 21 34 chr2 166539963 166540201 -84147653 + HAL1 LINE L1 1249 1483 -1024 14855 144 55 59 chr2 166540594 166542950 -84144904 + L1PB1 LINE L1 11 2377 -4490 1097 124 37 0 chr2 166542950 166543111 -84144743 + AluSc SINE Alu 141 307 -2 14855 144 55 59 chr2 166543111 166543370 -84144484 + L1PB1 LINE L1 2377 2636 -4231 1793 130 4 0 chr2 166543370 166543624 -84144230 + AluSx SINE Alu 27 281 -31 2331 125 30 25 chr2 166543624 166543985 -84143869 - THE1B LTR MaLR -1 363 1 14855 144 55 59 chr2 166543985 166547746 -84140108 + L1PB1 LINE L1 2635 6521 -346 225 94 0 0 chr2 166547746 166547778 -84140076 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 14855 144 55 59 chr2 166547778 166548120 -84139734 + L1PB1 LINE L1 6521 6863 -4 651 287 83 78 chr2 166549320 166549912 -84137942 + MLT1G1 LTR MaLR 1 595 0 27 29 0 0 chr2 166551571 166551605 -84136249 + AT_rich Low_complexity Low_complexity 1 34 0 274 351 68 14 chr2 166551765 166551913 -84135941 - MER5A DNA MER1_type -5 184 29 193 183 130 126 chr2 166551974 166552163 -84135691 - MIR3 SINE MIR -65 143 2 * 402 318 15 42 chr2 166552163 166552327 -84135527 - MER5A DNA MER1_type -12 177 7 715 179 144 20 chr2 166552355 166552550 -84135304 - MER20 DNA MER1_type 0 219 1 24 0 0 0 chr2 166552582 166552606 -84135248 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 166552701 166552722 -84135132 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr2 166553779 166553816 -84134038 + (TA)n Simple_repeat Simple_repeat 2 38 0 1347 242 108 18 chr2 166554478 166554912 -84132942 + L1ME3A LINE L1 5692 6164 -6 3038 138 21 27 chr2 166555449 166556007 -84131847 + L1MB3 LINE L1 5591 6145 -38 1553 299 63 27 chr2 166556485 166556656 -84131198 - L2 LINE L2 -1 3312 3149 2203 166 77 0 chr2 166556656 166557048 -84130806 - MSTB LTR MaLR -1 425 4 1553 299 63 27 chr2 166557048 166557779 -84130075 - L2 LINE L2 -164 3149 2371 1004 217 57 143 chr2 166558983 166559404 -84128450 + MLT1D LTR MaLR 1 390 0 2281 70 40 0 chr2 166559816 166560114 -84127740 - AluY SINE Alu -1 310 1 299 228 0 0 chr2 166560338 166560395 -84127459 + AluSp SINE Alu 129 185 -118 22 70 0 0 chr2 166560831 166560874 -84126980 + AT_rich Low_complexity Low_complexity 1 43 0 21 71 0 0 chr2 166561460 166561502 -84126352 + AT_rich Low_complexity Low_complexity 1 42 0 189 171 0 0 chr2 166561880 166561915 -84125939 + A-rich Low_complexity Low_complexity 1 35 0 563 249 113 42 chr2 166563018 166563451 -84124403 - L1ME4a LINE L1 -2 6119 5656 182 345 81 0 chr2 166564194 166564281 -84123573 - L2 LINE L2 -667 2647 2554 1072 261 52 52 chr2 166565723 166565958 -84121896 - L2 LINE L2 -9 3304 3071 2143 129 0 0 chr2 166565958 166566261 -84121593 - AluSg SINE Alu -7 303 1 1072 261 52 52 chr2 166566261 166566637 -84121217 - L2 LINE L2 -242 3071 2694 1973 139 3 0 chr2 166567104 166567398 -84120456 - AluSx SINE Alu -17 295 1 576 200 36 0 chr2 166567919 166568029 -84119825 + FRAM SINE Alu 42 155 -21 30 0 0 0 chr2 166568029 166568059 -84119795 + AT_rich Low_complexity Low_complexity 1 30 0 1156 151 24 63 chr2 166568096 166568348 -84119506 - L1PA16 LINE L1 -1 6165 5924 3281 147 57 44 chr2 166568348 166569420 -84118434 + L1PA16 LINE L1 4651 5740 -426 1944 139 0 26 chr2 166569420 166569729 -84118125 + AluSx SINE Alu 1 301 -11 3281 147 57 44 chr2 166569729 166569899 -84117955 + L1PA16 LINE L1 5740 5906 -260 267 339 45 0 chr2 166571382 166571494 -84116360 + Charlie2 DNA MER1_type 203 319 -2543 898 206 128 47 chr2 166571504 166571655 -84116199 + Charlie2 DNA MER1_type 1859 1996 -866 1595 208 143 18 chr2 166571655 166572102 -84115752 + MLT1D LTR MaLR 1 503 -2 898 206 128 47 chr2 166572102 166572333 -84115521 + Charlie2 DNA MER1_type 1996 2272 -590 6357 162 71 9 chr2 166572794 166574036 -84113818 + L1M3f LINE L1 3 1648 -4065 4478 172 41 51 chr2 166574288 166574782 -84113072 - L1MA9 LINE L1 -38 6274 5777 204 97 0 0 chr2 166574782 166574813 -84113041 + (TG)n Simple_repeat Simple_repeat 2 32 0 4478 172 41 51 chr2 166574813 166575282 -84112572 - L1MA9 LINE L1 -535 5777 5333 1879 128 13 42 chr2 166575282 166575588 -84112266 - AluSp SINE Alu -14 299 3 4478 172 41 51 chr2 166575588 166575728 -84112126 - L1MA9 LINE L1 -979 5333 5193 2085 128 0 3 chr2 166575991 166576339 -84111515 + AluSx SINE Alu 1 347 0 977 281 108 9 chr2 166576516 166576840 -84111014 + MLT1J2 LTR MaLR 81 436 -14 341 298 123 19 chr2 166576904 166577213 -84110641 + L1ME4a LINE L1 5512 5852 -269 313 327 122 44 chr2 166577250 166577366 -84110488 + MLT1K LTR MaLR 13 119 -469 332 271 144 43 chr2 166577366 166577554 -84110300 - MER63A DNA MER1_type 0 210 4 313 327 122 44 chr2 166577554 166577798 -84110056 + MLT1K LTR MaLR 119 401 -187 722 207 27 7 chr2 166577805 166577955 -84109899 + MLT1A1 LTR MaLR 1 153 -212 249 290 116 92 chr2 166578008 166578215 -84109639 + L2 LINE L2 2936 3147 -125 2307 172 33 2 chr2 166578222 166578641 -84109213 - MSTB1 LTR MaLR 0 432 1 2134 73 40 0 chr2 166580089 166580364 -84107490 + AluSp SINE Alu 7 292 -21 56 16 0 0 chr2 166582011 166582074 -84105780 + AT_rich Low_complexity Low_complexity 1 63 0 23 92 0 0 chr2 166582093 166582158 -84105696 + AT_rich Low_complexity Low_complexity 1 65 0 425 385 125 5 chr2 166582891 166583275 -84104579 + L2 LINE L2 2819 3248 -24 27 49 0 0 chr2 166583811 166583852 -84104002 + AT_rich Low_complexity Low_complexity 1 41 0 430 293 47 37 chr2 166583920 166584135 -84103719 - MLT1J LTR MaLR -3 508 292 183 100 0 0 chr2 166584816 166584846 -84103008 + (CA)n Simple_repeat Simple_repeat 1 30 0 451 213 138 19 chr2 166585347 166585507 -84102347 + MER104 DNA MER2_type 1 179 -1 3907 114 12 3 chr2 166585699 166586297 -84101557 - L1PB1 LINE L1 -3 6148 5546 424 330 75 21 chr2 166586375 166586563 -84101291 - MIR3 SINE MIR -6 202 5 310 269 85 14 chr2 166587223 166587364 -84100490 - MARNA DNA Mariner -126 460 310 369 266 107 12 chr2 166588044 166588213 -84099641 + MIR SINE MIR 34 218 -44 249 348 26 9 chr2 166588460 166588575 -84099279 - L2 LINE L2 -5 3308 3192 393 333 114 15 chr2 166589052 166589253 -84098601 - MIR SINE MIR -11 251 31 199 211 0 0 chr2 166589672 166589710 -84098144 - L2 LINE L2 -13 3300 3263 433 319 107 45 chr2 166589710 166590159 -84097695 + MLT1J LTR MaLR 1 477 -34 2082 106 0 7 chr2 166591134 166591445 -84096409 + AluSc SINE Alu 1 309 0 282 29 0 0 chr2 166591671 166591706 -84096148 + (CA)n Simple_repeat Simple_repeat 1 35 0 517 272 20 27 chr2 166591888 166592035 -84095819 + MIR3 SINE MIR 20 165 -43 30 45 0 0 chr2 166593113 166593157 -84094697 + AT_rich Low_complexity Low_complexity 1 44 0 334 279 66 37 chr2 166593187 166593323 -84094531 - MIR3 SINE MIR -3 205 66 21 71 0 0 chr2 166594009 166594051 -84093803 + AT_rich Low_complexity Low_complexity 1 42 0 1735 76 0 9 chr2 166596151 166596375 -84091479 + AluY SINE Alu 84 305 -6 246 304 49 20 chr2 166596427 166596529 -84091325 - L2 LINE L2 -4 3309 3205 240 308 141 26 chr2 166597289 166597445 -84090409 + MIR SINE MIR 63 236 -26 350 167 281 18 chr2 166597688 166597802 -84090052 - MIR SINE MIR -10 252 109 187 250 0 23 chr2 166598058 166598102 -84089752 - L2 LINE L2 -13 3300 3258 544 113 0 0 chr2 166598232 166598312 -84089542 - MADE1 DNA Mariner 0 80 1 326 232 61 0 chr2 166598602 166598684 -84089170 - MIR SINE MIR -45 217 131 208 289 39 29 chr2 166599247 166599351 -84088503 + L2 LINE L2 3179 3283 -30 2270 88 14 3 chr2 166600316 166600610 -84087244 - AluSc SINE Alu -12 297 1 1654 155 48 14 chr2 166600737 166601027 -84086827 + AluJo SINE Alu 6 305 -7 273 290 138 29 chr2 166601057 166601195 -84086659 + HAL1b LINE L1 295 447 -901 306 373 26 36 chr2 166601232 166601425 -84086429 + HAL1b LINE L1 453 643 -705 23 0 0 0 chr2 166602373 166602396 -84085458 + AT_rich Low_complexity Low_complexity 1 23 0 313 264 23 106 chr2 166602672 166602937 -84084917 + L1MDa LINE L1 2281 2523 -4017 339 315 88 26 chr2 166603028 166603301 -84084553 + L1MDa LINE L1 3706 3995 -2545 1770 145 180 11 chr2 166603385 166603751 -84084103 + MSTA LTR MaLR 1 428 0 2190 123 0 0 chr2 166604026 166604326 -84083528 + AluSg SINE Alu 1 300 -10 344 277 106 50 chr2 166604495 166604596 -84083258 + L1MB8 LINE L1 5254 5348 -830 324 0 0 0 chr2 166604596 166604632 -84083222 + (CA)n Simple_repeat Simple_repeat 1 36 0 344 277 106 50 chr2 166604632 166605165 -84082689 + L1MB8 LINE L1 5348 5930 -248 3039 169 26 30 chr2 166605196 166605581 -84082273 - MER6A DNA MER2_type -261 604 220 207 0 0 0 chr2 166605581 166605604 -84082250 + (CA)n Simple_repeat Simple_repeat 1 23 0 3039 169 26 30 chr2 166605604 166605823 -84082031 - MER6A DNA MER2_type -645 220 2 1094 111 0 0 chr2 166605991 166606135 -84081719 + AluSg/x SINE Alu 158 301 -11 1707 197 38 80 chr2 166606616 166607143 -84080711 + MLT1D LTR MaLR 1 505 0 998 303 14 43 chr2 166607391 166607814 -84080040 + L2 LINE L2 2156 2566 -748 2196 86 0 0 chr2 166607814 166608130 -84079724 - AluSg1 SINE Alu 0 316 1 567 311 40 31 chr2 166608279 166608504 -84079350 + L2 LINE L2 59 285 -3029 228 294 88 0 chr2 166608609 166608711 -84079143 + L2 LINE L2 294 404 -2910 272 296 9 9 chr2 166608714 166608822 -84079032 + L1MEc LINE L1 1643 1750 -4646 235 266 39 49 chr2 166609060 166609263 -84078591 + L1MEc LINE L1 2032 2232 -4164 1813 121 16 77 chr2 166609500 166609813 -84078041 - AluSx SINE Alu -18 294 1 189 306 16 0 chr2 166609917 166609979 -84077875 + MIR3 SINE MIR 118 180 -28 2138 129 0 0 chr2 166660697 166661006 -84026848 - AluSc SINE Alu 0 309 1 238 196 39 0 chr2 166661025 166661076 -84026778 - L2 LINE L2 0 3313 3261 606 273 139 0 chr2 166661078 166661250 -84026604 + MIR SINE MIR 20 215 -47 207 310 17 0 chr2 166661288 166661346 -84026508 - L2 LINE L2 -50 3222 3164 28 0 0 0 chr2 166662079 166662107 -84025747 + AT_rich Low_complexity Low_complexity 1 28 0 186 103 0 0 chr2 166662927 166662956 -84024898 + (CA)n Simple_repeat Simple_repeat 2 30 0 222 37 0 0 chr2 166663884 166663911 -84023943 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 378 252 9 78 chr2 166663912 166664029 -84023825 - L1MC/D LINE L1 -451 5711 5615 736 314 105 21 chr2 166664030 166664462 -84023392 - LTR33 LTR ERVL 0 521 15 603 292 46 15 chr2 166664472 166664731 -84023123 - L1MC/D LINE L1 -585 5577 5336 955 289 78 25 chr2 166664735 166665410 -84022444 + L1MC/D LINE L1 4619 5329 -817 230 372 83 25 chr2 166665455 166665576 -84022278 + L2 LINE L2 3144 3271 -1 1688 77 53 20 chr2 166666336 166666582 -84021272 + L1PA7 LINE L1 5887 6140 -14 225 0 0 0 chr2 166666587 166666612 -84021242 + (TAA)n Simple_repeat Simple_repeat 2 26 0 1010 134 45 0 chr2 166667291 166667470 -84020384 + MER53 DNA DNA 3 189 0 691 249 101 92 chr2 166667895 166668232 -84019622 - MLT1H LTR MaLR -199 350 11 421 209 76 29 chr2 166669386 166669491 -84018363 - MIR SINE MIR -120 142 33 366 23 0 0 chr2 166669645 166669688 -84018166 + (CA)n Simple_repeat Simple_repeat 2 44 0 32 0 0 0 chr2 166669842 166669874 -84017980 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr2 166670136 166670166 -84017688 + AT_rich Low_complexity Low_complexity 1 30 0 604 310 178 9 chr2 166670413 166670852 -84017002 - L1ME3 LINE L1 -296 5866 5354 228 243 78 97 chr2 166674956 166675059 -84012795 + L2 LINE L2 3208 3308 -5 448 147 54 54 chr2 166676326 166676455 -84011399 - MER96B DNA MER1_type? -245 172 44 397 310 74 26 chr2 166676622 166676893 -84010961 - L1ME3A LINE L1 -302 5868 5585 21 0 0 0 chr2 166676932 166676953 -84010901 + AT_rich Low_complexity Low_complexity 1 21 0 192 397 66 16 chr2 166677343 166677464 -84010390 + L2 LINE L2 3138 3264 -8 321 256 87 30 chr2 166682618 166682765 -84005089 + MIR SINE MIR 3 151 -67 30 0 0 0 chr2 166685031 166685061 -84002793 + AT_rich Low_complexity Low_complexity 1 30 0 806 180 40 112 chr2 166685759 166686037 -84001817 + MIR SINE MIR 3 260 -2 297 51 0 0 chr2 166686190 166686229 -84001625 + (CA)n Simple_repeat Simple_repeat 2 40 0 505 315 85 6 chr2 166687836 166688001 -83999853 + MER5B DNA MER1_type 1 178 0 41 58 0 0 chr2 166688602 166688671 -83999183 + AT_rich Low_complexity Low_complexity 1 69 0 26 74 0 0 chr2 166688741 166688795 -83999059 + AT_rich Low_complexity Low_complexity 1 54 0 2318 64 17 3 chr2 166688929 166689225 -83998629 + AluY SINE Alu 1 300 -11 815 203 6 13 chr2 166689298 166689456 -83998398 - FRAM SINE Alu -19 157 1 181 413 80 0 chr2 166691865 166692015 -83995839 - L2 LINE L2 -2 3270 3109 1615 273 148 49 chr2 166692291 166692342 -83995512 + L2 LINE L2 1724 1769 -1544 246 62 0 0 chr2 166692342 166692374 -83995480 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1615 273 148 49 chr2 166692374 166692396 -83995458 + L2 LINE L2 1769 1787 -1526 1976 119 0 42 chr2 166692396 166692706 -83995148 + AluSq SINE Alu 11 307 -6 1615 273 148 49 chr2 166692706 166693798 -83994056 + L2 LINE L2 1787 3076 -237 1978 135 10 0 chr2 166693798 166694086 -83993768 - AluSx SINE Alu -19 293 3 1615 273 148 49 chr2 166694086 166694350 -83993504 + L2 LINE L2 3076 3312 -1 2106 123 3 0 chr2 166696083 166696397 -83991457 + AluSq SINE Alu 1 313 0 207 0 0 0 chr2 166697153 166697176 -83990678 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 2278 90 0 3 chr2 166697211 166697510 -83990344 - AluSg1 SINE Alu -11 298 1 452 333 16 21 chr2 166697724 166697913 -83989941 + MIR SINE MIR 75 262 0 22 0 0 0 chr2 166699314 166699336 -83988518 + AT_rich Low_complexity Low_complexity 1 22 0 294 280 12 0 chr2 166700583 166700672 -83987182 - MIR3 SINE MIR -17 191 100 243 0 0 0 chr2 166700802 166700829 -83987025 + (CA)n Simple_repeat Simple_repeat 2 28 0 250 259 123 12 chr2 166701685 166701766 -83986088 + MIR SINE MIR 163 252 -10 1661 164 0 37 chr2 166704212 166704510 -83983344 - AluJo SINE Alu -23 289 3 1341 239 65 25 chr2 166706010 166706453 -83981401 - MLT1C LTR MaLR -6 461 1 380 329 129 0 chr2 166709297 166709467 -83978387 - MIR SINE MIR -50 212 21 787 233 14 45 chr2 166709673 166709896 -83977958 + MER20 DNA MER1_type 3 218 -1 21 0 0 0 chr2 166709939 166709960 -83977894 + AT_rich Low_complexity Low_complexity 1 21 0 1616 220 41 112 chr2 166709980 166710427 -83977427 + L1MC5 LINE L1 6636 7113 -848 189 0 0 0 chr2 166710427 166710448 -83977406 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1616 220 41 112 chr2 166710448 166710464 -83977390 + L1MC5 LINE L1 7113 7129 -832 2054 109 0 0 chr2 166710464 166710740 -83977114 - AluSx SINE Alu -36 276 1 1616 220 41 112 chr2 166710740 166711172 -83976682 + L1MC5 LINE L1 7129 7469 -492 338 329 82 0 chr2 166711239 166711385 -83976469 + L1M4 LINE L1 2875 3032 -3114 297 0 0 0 chr2 166711749 166711782 -83976072 + (TA)n Simple_repeat Simple_repeat 2 34 0 210 338 0 0 chr2 166711832 166711900 -83975954 - MIR SINE MIR -146 116 49 1889 163 7 3 chr2 166712060 166712366 -83975488 - AluJb SINE Alu -5 307 1 284 336 134 0 chr2 166712750 166712869 -83974985 - MIR3 SINE MIR -27 181 47 402 204 88 29 chr2 166713099 166713236 -83974618 - L1ME4a LINE L1 -3 6118 5974 267 247 0 49 chr2 166715313 166715394 -83972460 + MIR SINE MIR 185 261 -1 24 32 0 0 chr2 166715755 166715786 -83972068 + AT_rich Low_complexity Low_complexity 1 31 0 22 56 0 0 chr2 166715895 166715931 -83971923 + AT_rich Low_complexity Low_complexity 1 36 0 1321 163 0 33 chr2 166716898 166717143 -83970711 + AluJb SINE Alu 44 280 -32 252 122 0 0 chr2 166717145 166717186 -83970668 + (CAA)n Simple_repeat Simple_repeat 2 42 0 717 263 8 59 chr2 166717661 166717897 -83969957 + MER58A DNA MER1_type 1 224 0 462 309 177 22 chr2 166718178 166718686 -83969168 - HAL1 LINE L1 -1626 881 295 2267 85 0 0 chr2 166719421 166719735 -83968119 + AluY SINE Alu 1 314 0 345 204 93 33 chr2 166720432 166720593 -83967261 + MER3 DNA MER1_type 7 208 -1 920 203 17 0 chr2 166720605 166720782 -83967072 + MER5A DNA MER1_type 4 183 -6 836 277 279 12 chr2 166720784 166721356 -83966498 - L2 LINE L2 -103 3210 2468 303 225 125 89 chr2 166723365 166723645 -83964209 + L1ME4a LINE L1 5829 6118 -3 950 178 6 12 chr2 166723648 166723817 -83964037 + AluJo SINE Alu 123 290 -22 361 279 19 19 chr2 166724605 166724709 -83963145 - MIR SINE MIR -87 121 18 1157 190 19 9 chr2 166725312 166725523 -83962331 - MER46A DNA MER2_type 0 236 24 206 119 48 0 chr2 166725571 166725613 -83962241 + (CATA)n Simple_repeat Simple_repeat 4 47 0 26 0 0 0 chr2 166725630 166725656 -83962198 + AT_rich Low_complexity Low_complexity 1 26 0 1145 191 19 0 chr2 166726817 166727026 -83960828 + AluJb SINE Alu 90 302 -10 190 271 34 34 chr2 166727245 166727304 -83960550 - L2 LINE L2 -4 3309 3251 2158 117 7 0 chr2 166727641 166727940 -83959914 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr2 166729018 166729041 -83958813 + AT_rich Low_complexity Low_complexity 1 23 0 504 252 17 0 chr2 166731188 166731307 -83956547 + FLAM_A SINE Alu 1 121 -12 579 257 268 4 chr2 166732698 166732959 -83954895 + L2 LINE L2 2386 2715 -599 459 108 0 0 chr2 166732959 166733024 -83954830 + U3 snRNA snRNA 1 65 -152 217 272 86 37 chr2 166733049 166733130 -83954724 + L2 LINE L2 2701 2785 -529 407 204 68 0 chr2 166733133 166733236 -83954618 - Tigger5 DNA MER2_type 0 2323 2214 309 247 14 14 chr2 166733270 166733343 -83954511 - Tigger5 DNA MER2_type 0 2323 2251 261 236 0 0 chr2 166733312 166733367 -83954487 - Tigger5 DNA MER2_type -2268 55 1 * 300 231 49 112 chr2 166733579 166733722 -83954132 + L2 LINE L2 3180 3313 0 1724 161 32 0 chr2 166734140 166734420 -83953434 - AluSx SINE Alu -21 291 3 28 0 0 0 chr2 166735173 166735201 -83952653 + AT_rich Low_complexity Low_complexity 1 28 0 1841 289 61 64 chr2 166736452 166737415 -83950439 + L2 LINE L2 1883 2837 -476 463 215 196 13 chr2 166737415 166737573 -83950281 + MER5A DNA MER1_type 3 189 0 1841 289 61 64 chr2 166737573 166738037 -83949817 + L2 LINE L2 2837 3301 -12 740 309 76 0 chr2 166738813 166739036 -83948818 - MIR SINE MIR -18 244 5 187 237 224 0 chr2 166739178 166739254 -83948600 - MIR SINE MIR -89 173 81 485 285 95 13 chr2 166739416 166739574 -83948280 + MIR3 SINE MIR 20 190 -18 504 195 124 0 chr2 166740215 166740328 -83947526 + MER3 DNA MER1_type 48 127 -82 * 1175 167 42 45 chr2 166740325 166740387 -83947467 + MER3 DNA MER1_type 2234 2295 -329 1819 164 31 0 chr2 166740387 166740674 -83947180 - AluSx SINE Alu -10 302 7 1175 167 42 45 chr2 166740674 166740898 -83946956 + MER3 DNA MER1_type 2295 2519 -105 691 231 327 7 chr2 166740903 166741224 -83946630 + MLT1F1 LTR MaLR 3 427 -140 1427 202 40 7 chr2 166741539 166741811 -83946043 + AluJb SINE Alu 1 281 -31 330 156 0 0 chr2 166742704 166742768 -83945086 + GA-rich Low_complexity Low_complexity 1 64 0 268 310 125 42 chr2 166743462 166743639 -83944215 + MIR SINE MIR 12 212 -50 759 150 125 12 chr2 166743639 166743799 -83944055 - MER5B DNA MER1_type 0 178 1 268 310 125 42 chr2 166743799 166743837 -83944017 + MIR SINE MIR 212 245 -17 885 189 18 6 chr2 166744297 166744481 -83943373 + AluJb SINE Alu 121 306 0 183 289 22 0 chr2 166744763 166744808 -83943046 - L2 LINE L2 -7 3265 3220 181 286 18 18 chr2 166744935 166744991 -83942863 - MIR SINE MIR -11 251 196 3219 240 53 40 chr2 166746040 166747396 -83940458 + L1MC4a LINE L1 4975 7807 -1 251 305 227 7 chr2 166747421 166747575 -83940279 + MER5A DNA MER1_type 2 189 0 1999 114 4 0 chr2 166747774 166748047 -83939807 + AluSp SINE Alu 1 274 -39 484 113 0 0 chr2 166748047 166748118 -83939736 + AluSp/q SINE Alu 227 297 -16 940 219 13 75 chr2 166749306 166749344 -83938510 + MER58A DNA MER1_type 11 50 -2370 2328 78 0 0 chr2 166749344 166749640 -83938214 - AluY SINE Alu -12 299 4 940 219 13 75 chr2 166749640 166749829 -83938025 + MER58A DNA MER1_type 50 224 0 1226 274 82 14 chr2 166749956 166750397 -83937457 + L1MC5 LINE L1 5466 5936 -1872 1746 171 3 10 chr2 166750542 166750846 -83937008 - AluJo SINE Alu -10 302 1 745 248 73 73 chr2 166751081 166751670 -83936184 + L1MC5 LINE L1 6554 7169 -792 354 294 42 14 chr2 166751776 166751919 -83935935 + L1MC4 LINE L1 7349 7495 -547 241 250 26 66 chr2 166751954 166752106 -83935748 + L1MC5 LINE L1 7390 7535 -426 280 271 105 11 chr2 166752109 166752290 -83935564 + L1MC5 LINE L1 7663 7860 -101 258 296 42 0 chr2 166752466 166752537 -83935317 + MIR3 SINE MIR 118 191 -17 1409 217 31 5 chr2 166752576 166752917 -83934937 - L1MB8 LINE L1 -186 5992 5678 2519 125 72 2 chr2 166752937 166753337 -83934517 + MSTA LTR MaLR 1 428 0 28 29 0 0 chr2 166754472 166754507 -83933347 + AT_rich Low_complexity Low_complexity 1 35 0 1476 91 101 0 chr2 166754964 166755173 -83932681 - MER30 DNA MER1_type 0 230 1 331 313 0 9 chr2 166755638 166755753 -83932101 + L2 LINE L2 3194 3307 -6 735 155 0 0 chr2 166756224 166756340 -83931514 + FLAM_C SINE Alu 1 116 -17 251 359 122 11 chr2 166756685 166756866 -83930988 - MIR SINE MIR -61 201 1 21 0 0 0 chr2 166758842 166758863 -83928991 + AT_rich Low_complexity Low_complexity 1 21 0 823 208 12 75 chr2 166761396 166761637 -83926217 + L1MA9 LINE L1 6049 6274 -38 716 209 40 14 chr2 166761668 166761816 -83926038 + FRAM SINE Alu 6 157 -19 264 301 15 66 chr2 166761819 166762015 -83925839 + L2 LINE L2 1797 1982 -1332 2064 115 32 0 chr2 166762097 166762401 -83925453 - AluSx SINE Alu 0 313 1 558 305 180 42 chr2 166762501 166763388 -83924466 + L2 LINE L2 2286 3313 0 1133 165 55 8 chr2 166763548 166763803 -83924051 - L1MD3 LINE L1 0 7995 7729 261 0 0 0 chr2 166763979 166764008 -83923846 + (CA)n Simple_repeat Simple_repeat 2 30 0 295 328 88 0 chr2 166764462 166764587 -83923267 - Charlie8 DNA MER1_type -2205 212 77 1824 138 15 0 chr2 166764972 166765240 -83922614 + AluSx SINE Alu 1 272 -40 212 0 36 0 chr2 166765746 166765774 -83922080 + (TTG)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr2 166766609 166766633 -83921221 + AT_rich Low_complexity Low_complexity 1 24 0 418 259 50 7 chr2 166766746 166766885 -83920969 + MIR SINE MIR 36 180 -82 25 31 0 0 chr2 166767033 166767065 -83920789 + AT_rich Low_complexity Low_complexity 1 32 0 242 300 17 0 chr2 166768283 166768343 -83919511 - MIR SINE MIR -195 67 7 864 194 55 46 chr2 166769131 166769348 -83918506 + L1MB5 LINE L1 5953 6171 -3 1654 184 6 47 chr2 166769770 166770091 -83917763 + AluJb SINE Alu 4 311 -1 1658 177 7 3 chr2 166770332 166770615 -83917239 + AluJo SINE Alu 1 284 -28 1031 171 143 70 chr2 166771508 166771823 -83916031 + MLT1A1 LTR MaLR 1 338 -27 1318 173 0 0 chr2 166771827 166772029 -83915825 + AluSg/x SINE Alu 72 273 -37 1124 143 122 4 chr2 166773983 166774213 -83913641 + L1MA9 LINE L1 6051 6307 -5 726 145 0 48 chr2 166775354 166775478 -83912376 + AluSq/x SINE Alu 1 118 -194 405 0 0 0 chr2 166775668 166775713 -83912141 + (CA)n Simple_repeat Simple_repeat 2 46 0 591 176 7 120 chr2 166775713 166775855 -83911999 + FLAM_A SINE Alu 5 130 -3 2999 185 27 8 chr2 166776680 166777268 -83910586 + MER6A DNA MER2_type 4 602 -3 30 27 0 0 chr2 166777930 166777967 -83909887 + AT_rich Low_complexity Low_complexity 1 37 0 210 71 0 0 chr2 166778118 166778146 -83909708 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 221 77 51 0 chr2 166778146 166778185 -83909669 + (CATA)n Simple_repeat Simple_repeat 3 43 0 21 0 0 0 chr2 166778631 166778652 -83909202 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr2 166778755 166778777 -83909077 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1809 143 0 0 chr2 166778790 166779055 -83908799 - AluJo SINE Alu -26 286 22 336 315 157 6 chr2 166779140 166779318 -83908536 + MIR SINE MIR 6 210 -52 187 31 62 0 chr2 166779951 166779983 -83907871 + A-rich Low_complexity Low_complexity 2 35 0 245 257 40 14 chr2 166780849 166780923 -83906931 + MIR SINE MIR 114 189 -73 35 54 0 0 chr2 166783229 166783285 -83904569 + AT_rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 166783353 166783374 -83904480 + (A)n Simple_repeat Simple_repeat 1 21 0 1535 172 4 4 chr2 166783380 166783630 -83904224 + AluJo SINE Alu 41 290 -22 212 336 100 44 chr2 166783999 166784228 -83903626 - MIR SINE MIR -1 261 20 2424 63 0 3 chr2 166785385 166785686 -83902168 + AluY SINE Alu 1 300 -11 3196 237 51 11 chr2 166786024 166787664 -83900190 + L1ME1 LINE L1 4407 6111 -55 1397 185 24 51 chr2 166787665 166787805 -83900049 + AluJo SINE Alu 1 130 -182 2854 10 0 0 chr2 166787805 166788116 -83899738 + AluY SINE Alu 1 311 0 1397 185 24 51 chr2 166788116 166788267 -83899587 + AluJo SINE Alu 130 284 -28 2676 20 0 0 chr2 166789931 166790258 -83897596 + AluYa5 SINE Alu 1 327 0 375 370 84 24 chr2 166790674 166790923 -83896931 - L2 LINE L2 -453 2861 2598 1062 251 161 21 chr2 166791129 166791664 -83896190 - Charlie7 DNA MER1_type -1970 642 33 4477 156 59 8 chr2 166791763 166791923 -83895931 - L1MC2 LINE L1 -25 6319 6169 501 32 0 0 chr2 166791923 166791986 -83895868 + (TC)n Simple_repeat Simple_repeat 2 64 0 234 0 0 0 chr2 166791985 166792011 -83895843 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 4477 156 59 8 chr2 166791986 166792679 -83895175 - L1MC2 LINE L1 -175 6169 5449 210 320 0 0 chr2 166792910 166792960 -83894894 + MIR SINE MIR 48 97 -165 1632 187 7 23 chr2 166793342 166793652 -83894202 - AluJb SINE Alu -7 305 1 1891 117 52 31 chr2 166793813 166794103 -83893751 + AluSx SINE Alu 3 298 -14 1972 134 7 17 chr2 166794432 166794767 -83893087 - AluSx SINE Alu 0 312 1 24 91 0 0 chr2 166796966 166797032 -83890822 + AT_rich Low_complexity Low_complexity 1 66 0 628 184 8 8 chr2 166797487 166797612 -83890242 + HsTC2 DNA Tc2 626 750 -1148 479 270 129 10 chr2 166797614 166797896 -83889958 + HsTC2 DNA Tc2 1286 1759 -139 281 263 61 0 chr2 166798050 166798149 -83889705 + HsTC2 DNA Tc2 1789 1893 -5 237 253 187 33 chr2 166798951 166799042 -83888812 - L2 LINE L2 0 3272 3168 366 284 99 31 chr2 166799242 166799404 -83888450 + MIR SINE MIR 84 256 -6 302 354 55 0 chr2 166800526 166800653 -83887201 - MIR SINE MIR -80 182 49 23 0 0 0 chr2 166800747 166800770 -83887084 + AT_rich Low_complexity Low_complexity 1 23 0 224 319 21 69 chr2 166800857 166801001 -83886853 + MIR SINE MIR 125 261 -1 2025 144 3 0 chr2 166801765 166802064 -83885790 + AluSx SINE Alu 1 300 -12 344 296 111 19 chr2 166802106 166802268 -83885586 + MIR SINE MIR 8 184 -78 274 350 78 30 chr2 166802782 166803163 -83884691 - L2 LINE L2 -204 3068 2673 21 0 0 0 chr2 166803279 166803300 -83884554 + AT_rich Low_complexity Low_complexity 1 21 0 202 188 0 0 chr2 166804009 166804041 -83883813 + polypurine Low_complexity Low_complexity 2 33 0 228 234 21 85 chr2 166804732 166804826 -83883028 + L1MC4 LINE L1 6615 6702 -1340 * 239 261 23 23 chr2 166804786 166804874 -83882980 - L1MC4 LINE L1 -1340 6702 6615 227 287 0 43 chr2 166804889 166804983 -83882871 - L1MC4 LINE L1 -1339 6703 6614 * 240 247 0 82 chr2 166804945 166805042 -83882812 + L1MC4 LINE L1 6614 6702 -1340 487 219 11 15 chr2 166805043 166805436 -83882418 + (TA)n Simple_repeat Simple_repeat 1 391 0 1555 178 43 7 chr2 166805437 166805718 -83882136 - AluJb SINE Alu -21 291 1 21 0 0 0 chr2 166806168 166806189 -83881665 + AT_rich Low_complexity Low_complexity 1 21 0 2044 128 0 26 chr2 166806463 166806776 -83881078 - AluSx SINE Alu -2 310 6 1655 195 0 3 chr2 166806876 166807168 -83880686 - AluJb SINE Alu -21 291 1 2112 107 0 4 chr2 166807529 166807834 -83880020 - AluSg SINE Alu 0 304 1 295 255 89 57 chr2 166808685 166808842 -83879012 - MIR SINE MIR -54 208 47 446 0 19 0 chr2 166809377 166809431 -83878423 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1381 126 5 5 chr2 166809434 166809633 -83878221 - AluSg/x SINE Alu -30 282 84 182 352 37 0 chr2 166809908 166809962 -83877892 + L2 LINE L2 3249 3304 -9 308 316 62 34 chr2 166810539 166810716 -83877138 + L1ME4a LINE L1 5729 5910 -211 2232 116 3 0 chr2 166810747 166811049 -83876805 + AluSx SINE Alu 1 303 -9 445 238 12 61 chr2 166811126 166811290 -83876564 - MER103 DNA DNA -8 158 3 522 327 58 13 chr2 166811580 166811806 -83876048 + MIR SINE MIR 8 243 -19 271 286 156 7 chr2 166813192 166813327 -83874527 - MIR SINE MIR -62 146 2 204 127 55 0 chr2 166813527 166813582 -83874272 + T-rich Low_complexity Low_complexity 3 60 0 2025 146 7 0 chr2 166813587 166813896 -83873958 - AluSx SINE Alu -1 311 1 485 234 39 0 chr2 166815050 166815204 -83872650 + L1MC4a LINE L1 5730 5889 -1919 584 247 78 0 chr2 166815280 166815446 -83872408 + Charlie5 DNA MER1_type 2 180 -2432 350 134 75 0 chr2 166815491 166815558 -83872296 + Charlie5 DNA MER1_type 2552 2623 0 21 57 0 0 chr2 166816378 166816413 -83871441 + AT_rich Low_complexity Low_complexity 1 35 0 51 26 0 13 chr2 166817665 166817688 -83870166 + AT_rich Low_complexity Low_complexity 1 23 -52 2072 146 3 0 chr2 166817688 166817997 -83869857 + AluSx SINE Alu 1 310 -2 51 26 0 13 chr2 166817997 166818049 -83869805 + AT_rich Low_complexity Low_complexity 23 75 0 29 0 0 0 chr2 166818090 166818119 -83869735 + AT_rich Low_complexity Low_complexity 1 29 0 321 258 81 84 chr2 166818937 166819247 -83868607 + MARNA DNA Mariner 21 329 -257 21 36 0 0 chr2 166819338 166819366 -83868488 + AT_rich Low_complexity Low_complexity 1 28 0 2245 86 3 0 chr2 166819421 166819712 -83868142 + AluSp SINE Alu 13 304 -9 1750 134 48 31 chr2 166819726 166820018 -83867836 + AluJb SINE Alu 3 299 -13 2472 60 0 0 chr2 166820097 166820397 -83867457 - AluY SINE Alu -11 300 1 24 0 0 0 chr2 166820474 166820498 -83867356 + AT_rich Low_complexity Low_complexity 1 24 0 675 216 82 18 chr2 166821258 166821429 -83866425 - MER58A DNA MER1_type -3 221 40 3663 166 92 47 chr2 166821437 166822327 -83865527 + L1MB3 LINE L1 5254 6183 0 24 67 0 0 chr2 166823002 166823047 -83864807 + AT_rich Low_complexity Low_complexity 1 45 0 384 256 88 22 chr2 166823126 166823263 -83864591 + MIR SINE MIR 6 151 -111 452 273 37 35 chr2 166823444 166823621 -83864233 + MER5B DNA MER1_type 1 188 -1 334 252 25 8 chr2 166824259 166824378 -83863476 + (TA)n Simple_repeat Simple_repeat 1 121 0 629 195 0 39 chr2 166824548 166824676 -83863178 + FLAM_A SINE Alu 1 123 -10 245 304 73 10 chr2 166825213 166825323 -83862531 + MIR SINE MIR 36 148 -60 626 223 8 8 chr2 166825958 166826088 -83861766 + FLAM_C SINE Alu 1 130 -13 366 248 119 152 chr2 166827367 166828065 -83859789 + L1M2 LINE L1 441 1115 -5734 514 33 11 143 chr2 166829365 166829456 -83858398 - MADE1 DNA Mariner -1 79 1 509 302 76 55 chr2 166830292 166830620 -83857234 + MLT1I LTR MaLR 19 353 -56 2420 100 0 0 chr2 166830722 166831032 -83856822 - AluSq SINE Alu -3 310 1 2171 112 10 3 chr2 166831349 166831652 -83856202 - AluSg SINE Alu -5 305 1 250 309 138 0 chr2 166833759 166833853 -83854001 - L2 LINE L2 -20 3252 3146 425 230 0 20 chr2 166834758 166834858 -83852996 + MIR SINE MIR 7 104 -158 255 188 62 50 chr2 166834989 166835069 -83852785 + MIR SINE MIR 64 144 -64 232 305 142 12 chr2 166835262 166835367 -83852487 - MIR SINE MIR -62 146 34 228 35 0 0 chr2 166835885 166835914 -83851940 + (CAA)n Simple_repeat Simple_repeat 2 30 0 354 286 30 30 chr2 166836188 166836321 -83851533 + MIR SINE MIR 111 243 -19 27 29 0 0 chr2 166837340 166837374 -83850480 + AT_rich Low_complexity Low_complexity 1 34 0 180 296 45 34 chr2 166837491 166837579 -83850275 - MIR3 SINE MIR -9 199 111 804 182 57 17 chr2 166837587 166837763 -83850091 + MER53 DNA DNA 7 189 0 2647 174 40 37 chr2 166837804 166837885 -83849969 - L1MA9 LINE L1 -230 6082 6002 1716 214 24 72 chr2 166837885 166838071 -83849783 - L1MD3 LINE L1 -672 5496 5303 1752 118 0 0 chr2 166838071 166838309 -83849545 - AluSx SINE Alu -12 300 63 1716 214 24 72 chr2 166838309 166838343 -83849511 - L1MD3 LINE L1 -865 5303 5269 312 27 0 0 chr2 166838343 166838380 -83849474 + (CA)n Simple_repeat Simple_repeat 2 38 0 1716 214 24 72 chr2 166838380 166838669 -83849185 - L1MD3 LINE L1 -899 5269 4968 1873 184 0 7 chr2 166838669 166838979 -83848875 - AluJb SINE Alu 0 312 5 180 111 0 0 chr2 166838992 166839019 -83848835 + (TTG)n Simple_repeat Simple_repeat 1 27 0 306 149 0 6 chr2 166839019 166839090 -83848764 - AluJb SINE Alu -175 127 1 1716 214 24 72 chr2 166839090 166839568 -83848286 - L1MD3 LINE L1 -651 5517 5017 3452 117 11 13 chr2 166839867 166840389 -83847465 - Tigger1 DNA MER2_type -3 2415 1895 2133 101 7 0 chr2 166840391 166840679 -83847175 + AluSp SINE Alu 1 290 -23 330 294 0 0 chr2 166840689 166840781 -83847073 + L1MC4 LINE L1 6612 6703 -1339 317 258 40 3 chr2 166840723 166840823 -83847031 - L1MC4 LINE L1 -1339 6703 6614 * 10854 141 25 41 chr2 166840824 166842770 -83845084 - Tigger1 DNA MER2_type -499 1919 5 2204 121 0 0 chr2 166842770 166843067 -83844787 + AluSx SINE Alu 1 297 -15 333 281 50 25 chr2 166843247 166843407 -83844447 - L1MD3 LINE L1 -2830 3316 3153 219 315 11 33 chr2 166843449 166843541 -83844313 + L3 LINE CR1 1456 1545 -32 1833 158 0 7 chr2 166843868 166844165 -83843689 - AluJo SINE Alu -5 307 13 1709 158 56 33 chr2 166844738 166845098 -83842756 - THE1C LTR MaLR 0 375 8 605 157 9 9 chr2 166845079 166845187 -83842667 + 5S rRNA rRNA 1 108 -13 * 260 83 0 0 chr2 166845164 166845200 -83842654 - MSTA LTR MaLR -392 36 1 * 1363 190 45 93 chr2 166846661 166846979 -83840875 + LTR37B LTR ERV1 8 340 -128 186 48 24 48 chr2 166846979 166847021 -83840833 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 2264 90 0 0 chr2 166847024 166847301 -83840553 - AluSq SINE Alu -36 277 1 1824 175 3 7 chr2 166847302 166847599 -83840255 - AluJo SINE Alu -16 296 1 1363 190 45 93 chr2 166847599 166847716 -83840138 + LTR37B LTR ERV1 341 428 -40 22 35 0 0 chr2 166848094 166848123 -83839731 + AT_rich Low_complexity Low_complexity 1 29 0 535 298 49 69 chr2 166850107 166850496 -83837358 + MER31-int LTR ERV1 3672 4052 -884 588 137 51 0 chr2 166850879 166850996 -83836858 + LTR37B LTR ERV1 339 461 -7 24 0 0 0 chr2 166851572 166851596 -83836258 + AT_rich Low_complexity Low_complexity 1 24 0 6669 63 43 0 chr2 166852716 166853574 -83834280 + HERVL-A1 LTR ERVL 4760 5654 0 3166 70 0 2 chr2 166853574 166853973 -83833881 + MLT2A1 LTR ERVL 1 398 -46 288 200 0 0 chr2 166853982 166854042 -83833812 + (CATA)n Simple_repeat Simple_repeat 2 61 0 380 56 0 19 chr2 166854080 166854134 -83833720 + MLT2A1 LTR ERVL 392 444 0 614 284 67 21 chr2 166855459 166855741 -83832113 - L2 LINE L2 -107 3206 2912 259 311 0 0 chr2 166856068 166856129 -83831725 + L2 LINE L2 3245 3305 -8 602 276 72 0 chr2 166856319 166856500 -83831354 + MIR SINE MIR 68 261 -1 206 314 40 32 chr2 166856912 166857036 -83830818 + MIR SINE MIR 122 246 -16 2215 111 0 0 chr2 166857140 166857438 -83830416 + AluSg SINE Alu 1 298 -12 967 184 112 5 chr2 166857567 166857649 -83830205 - AluJo SINE Alu -89 223 151 198 0 0 0 chr2 166857649 166857671 -83830183 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 967 184 112 5 chr2 166857671 166857784 -83830070 - AluJo SINE Alu -161 151 7 2326 109 0 0 chr2 166857823 166858134 -83829720 + AluSx SINE Alu 1 311 -1 2254 107 7 3 chr2 166859299 166859607 -83828247 + AluSg SINE Alu 1 309 -1 253 279 86 64 chr2 166861020 166861160 -83826694 - MIR SINE MIR -11 251 109 288 280 0 32 chr2 166861276 166861369 -83826485 + GA-rich Low_complexity Low_complexity 4 93 0 2175 192 23 21 chr2 166861399 166861831 -83826023 - Tigger2a DNA MER2_type 0 434 2 2230 108 7 0 chr2 166862141 166862437 -83825417 - AluSx SINE Alu -14 298 1 31 26 0 0 chr2 166862510 166862548 -83825306 + AT_rich Low_complexity Low_complexity 1 38 0 255 241 65 169 chr2 166864012 166864302 -83823552 - LTR33A LTR ERVL -113 410 151 489 231 77 23 chr2 166864674 166864804 -83823050 - MIR SINE MIR -47 215 79 327 316 164 11 chr2 166864925 166865102 -83822752 + L2 LINE L2 2570 2773 -541 2543 62 0 0 chr2 166865823 166866127 -83821727 + AluY SINE Alu 1 304 -7 1001 174 6 0 chr2 166867389 166867550 -83820304 - FRAM SINE Alu -18 158 1 573 285 128 29 chr2 166868102 166868383 -83819471 - LTR16A1 LTR ERVL -2 455 147 6071 164 10 4 chr2 166869714 166870756 -83817098 - L1MC1 LINE L1 -18 6315 5268 1264 226 55 58 chr2 166871038 166871809 -83816045 - L1MC5 LINE L1 -42 7919 7033 2109 86 25 62 chr2 166871809 166872134 -83815720 - AluSq SINE Alu 0 313 1 1264 226 55 58 chr2 166872134 166872551 -83815303 - L1MC5 LINE L1 -928 7033 6616 1765 187 0 3 chr2 166872647 166872952 -83814902 - AluJb SINE Alu -8 304 1 820 252 144 33 chr2 166873246 166873726 -83814128 + L1ME4a LINE L1 5482 6014 -107 25 51 0 0 chr2 166873937 166873976 -83813878 + AT_rich Low_complexity Low_complexity 1 39 0 213 336 145 0 chr2 166874102 166874233 -83813621 - MIR SINE MIR -77 185 36 543 183 0 0 chr2 166874310 166874414 -83813440 - L1MA9 LINE L1 0 6312 6209 1725 125 47 3 chr2 166874415 166874711 -83813143 - L1MA9 LINE L1 -194 6118 5810 21 0 0 0 chr2 166874801 166874822 -83813032 + AT_rich Low_complexity Low_complexity 1 21 0 1481 201 7 39 chr2 166875372 166875681 -83812173 - AluJb SINE Alu -13 299 1 468 325 149 0 chr2 166875923 166876077 -83811777 - MER5A DNA MER1_type -1 188 12 504 330 103 0 chr2 166876739 166876924 -83810930 - L3 LINE CR1 -11 1566 1363 2081 122 0 0 chr2 166877721 166878009 -83809845 - AluSx SINE Alu -24 288 1 186 43 0 0 chr2 166878081 166878104 -83809750 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1745 173 53 18 chr2 166880528 166880870 -83806984 - THE1A LTR MaLR -1 354 1 1097 162 17 0 chr2 166881614 166881793 -83806061 + MER5A DNA MER1_type 7 188 -1 632 133 0 0 chr2 166882334 166882424 -83805430 - 5S rRNA rRNA -31 90 1 725 304 112 0 chr2 166883822 166884144 -83803710 + LTR16A LTR ERVL 1 358 -92 192 97 0 0 chr2 166884392 166884423 -83803431 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr2 166884983 166885011 -83802843 + AT_rich Low_complexity Low_complexity 1 28 0 5269 218 38 19 chr2 166886311 166888668 -83799186 - L1MA9 LINE L1 -25 6287 3883 1748 181 44 0 chr2 166888669 166888967 -83798887 - AluJb SINE Alu -1 311 1 258 195 0 61 chr2 166889117 166889199 -83798655 - L1MC5 LINE L1 -36 7925 7849 261 57 0 0 chr2 166889831 166889866 -83797988 + (TG)n Simple_repeat Simple_repeat 2 36 0 426 276 238 19 chr2 166891539 166891753 -83796101 + MIR SINE MIR 2 262 0 2083 118 0 44 chr2 166891763 166892078 -83795776 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 166892453 166892474 -83795380 + AT_rich Low_complexity Low_complexity 1 21 0 1998 136 30 0 chr2 166893910 166894211 -83793643 - AluJb SINE Alu -2 310 1 222 217 0 0 chr2 166894307 166894353 -83793501 + L2 LINE L2 3265 3310 -3 837 185 76 0 chr2 166894935 166895092 -83792762 - MER20 DNA MER1_type 0 219 51 382 389 75 4 chr2 166895698 166895963 -83791891 - L3b LINE CR1 -26 1557 1274 266 317 99 0 chr2 166896148 166896249 -83791605 - L3 LINE CR1 -11 1566 1456 223 248 33 25 chr2 166897633 166897754 -83790100 + (TATATG)n Simple_repeat Simple_repeat 5 126 0 1734 145 33 0 chr2 166898505 166898781 -83789073 + MER7A DNA MER2_type 63 345 -1 23 0 0 0 chr2 166899535 166899558 -83788296 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr2 166899640 166899680 -83788174 + AT_rich Low_complexity Low_complexity 1 40 0 265 250 172 44 chr2 166900716 166900887 -83786967 + MIR3 SINE MIR 3 198 -64 456 288 111 5 chr2 166903080 166903311 -83784543 - MIR SINE MIR -6 256 1 949 303 0 8 chr2 166903458 166903712 -83784142 + MIR SINE MIR 11 262 0 26 50 0 0 chr2 166904934 166904974 -83782880 + AT_rich Low_complexity Low_complexity 1 40 0 530 323 109 13 chr2 166904997 166905464 -83782390 + L1M4 LINE L1 3852 4363 -1783 340 223 0 58 chr2 166905548 166905651 -83782203 + L1M4 LINE L1 4490 4586 -1560 1563 212 23 0 chr2 166905700 166906002 -83781852 + AluJo SINE Alu 1 309 -3 1286 159 0 5 chr2 166906187 166906394 -83781460 + MER2 DNA MER2_type 1 206 -139 231 205 0 0 chr2 166906532 166906571 -83781283 - Tigger7 DNA MER2_type 0 2487 2449 2099 109 10 23 chr2 166906642 166906945 -83780909 + AluSg SINE Alu 3 301 -9 21 0 0 0 chr2 166906978 166906999 -83780855 + AT_rich Low_complexity Low_complexity 1 21 0 351 348 22 7 chr2 166907053 166907188 -83780666 + HAL1 LINE L1 1 137 -2370 526 245 158 17 chr2 166907340 166907581 -83780273 + HAL1 LINE L1 1687 1961 -546 263 254 131 8 chr2 166907760 166907882 -83779972 + HAL1 LINE L1 2244 2380 -127 1440 156 39 35 chr2 166907963 166908275 -83779579 - AluJo SINE Alu 0 313 1 319 274 0 35 chr2 166909234 166909347 -83778507 + L1P LINE L1 4496 4604 -1542 4415 211 19 18 chr2 166909864 166911393 -83776461 - L1MA9 LINE L1 -39 6273 4744 24 67 0 0 chr2 166911853 166911898 -83775956 + AT_rich Low_complexity Low_complexity 1 45 0 2148 120 3 0 chr2 166911949 166912248 -83775606 + AluSc SINE Alu 1 300 -9 898 363 57 37 chr2 166912473 166912782 -83775072 + L2 LINE L2 1836 2137 -1177 2217 128 0 0 chr2 166912782 166913094 -83774760 - AluSx SINE Alu 0 312 1 898 363 57 37 chr2 166913094 166913593 -83774261 + L2 LINE L2 2137 2660 -654 198 244 278 0 chr2 166913745 166913835 -83774019 + MIR SINE MIR 72 186 -76 564 245 31 19 chr2 166913982 166914141 -83773713 - MIR SINE MIR -2 260 100 453 274 148 30 chr2 166914359 166914438 -83773416 - MIR SINE MIR -3 259 191 474 226 108 0 chr2 166914438 166914540 -83773314 + MER81 DNA DNA 2 114 0 453 274 148 30 chr2 166914540 166914690 -83773164 - MIR SINE MIR -71 191 3 519 299 72 0 chr2 166914822 166914989 -83772865 - MIR SINE MIR -66 196 18 1923 124 84 12 chr2 166916095 166916441 -83771413 + THE1C LTR MaLR 1 371 -4 2445 50 0 0 chr2 166916515 166916798 -83771056 + AluY SINE Alu 1 283 -28 198 296 54 36 chr2 166919320 166919440 -83768414 + MIR SINE MIR 48 141 -67 235 354 148 55 chr2 166919685 166919922 -83767932 + L2 LINE L2 3014 3272 0 26 0 0 0 chr2 166919986 166920012 -83767842 + AT_rich Low_complexity Low_complexity 1 26 0 2064 123 0 30 chr2 166920025 166920327 -83767527 - AluSx SINE Alu -17 295 3 198 0 0 0 chr2 166920676 166920698 -83767156 + (TTG)n Simple_repeat Simple_repeat 3 24 0 383 191 292 6 chr2 166922451 166922629 -83765225 - LTR16A1 LTR ERVL -12 445 217 222 37 0 0 chr2 166923400 166923427 -83764427 + (TG)n Simple_repeat Simple_repeat 2 28 0 32 57 0 0 chr2 166924855 166924908 -83762946 + AT_rich Low_complexity Low_complexity 1 53 0 4062 115 6 53 chr2 166925810 166926505 -83761349 + L1PA16 LINE L1 5496 6157 -9 2052 48 41 82 chr2 166926707 166927034 -83760820 - AluY SINE Alu 0 315 1 21 0 0 0 chr2 166927036 166927057 -83760797 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 166927572 166927601 -83760253 + AT_rich Low_complexity Low_complexity 1 29 0 220 286 36 0 chr2 166927794 166927850 -83760004 + L2 LINE L2 3244 3301 -12 255 351 76 62 chr2 166927899 166928320 -83759534 + L2 LINE L2 2421 2847 -467 1313 179 12 148 chr2 166928426 166928508 -83759346 + MLT1A1 LTR MaLR 1 93 -272 4084 43 2 4 chr2 166928508 166929015 -83758839 + L1PA5 LINE L1 5649 6154 0 1313 179 12 148 chr2 166929015 166929351 -83758503 + MLT1A1 LTR MaLR 93 362 -3 331 271 68 42 chr2 166929765 166929957 -83757897 + L2 LINE L2 3112 3308 -5 417 352 24 0 chr2 166930441 166930566 -83757288 - L2 LINE L2 -8 3264 3137 216 313 117 52 chr2 166930712 166930942 -83756912 + L2 LINE L2 1352 1596 -1718 503 302 70 38 chr2 166931425 166931766 -83756088 + MLT1K LTR MaLR 237 588 0 11739 170 53 6 chr2 166931794 166934873 -83752981 + L1PA13 LINE L1 3028 6144 -19 201 287 0 92 chr2 166936136 166936223 -83751631 + L2 LINE L2 3171 3249 -64 553 233 55 20 chr2 166936411 166936557 -83751297 + MER5B DNA MER1_type 28 178 0 21 36 0 0 chr2 166936706 166936734 -83751120 + AT_rich Low_complexity Low_complexity 1 28 0 224 343 7 71 chr2 166936922 166937062 -83750792 + L2 LINE L2 2923 3053 -219 213 323 39 47 chr2 166937199 166937326 -83750528 + L2 LINE L2 3147 3272 0 1760 141 15 61 chr2 166937375 166937702 -83750152 + AluJo SINE Alu 1 312 0 1326 224 16 52 chr2 166937708 166938096 -83749758 + MLT1A2 LTR MaLR 1 374 0 23 54 0 0 chr2 166938109 166938146 -83749708 + AT_rich Low_complexity Low_complexity 1 37 0 482 252 17 0 chr2 166940196 166940315 -83747539 - MIR SINE MIR -139 123 3 23 54 0 0 chr2 166942204 166942241 -83745613 + AT_rich Low_complexity Low_complexity 1 37 0 26 0 0 0 chr2 166942669 166942695 -83745159 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr2 166943112 166943135 -83744719 + AT_rich Low_complexity Low_complexity 1 23 0 1816 157 56 0 chr2 166943161 166943448 -83744406 + AluJb SINE Alu 1 303 -9 354 289 149 10 chr2 166943485 166943679 -83744175 - L1ME4a LINE L1 -38 6083 5863 563 282 40 27 chr2 166943762 166943985 -83743869 - MIR SINE MIR 0 262 30 1420 229 24 85 chr2 166944263 166944655 -83743199 + L1ME1 LINE L1 5664 6078 -88 633 193 92 0 chr2 166944655 166944774 -83743080 - FLAM_A SINE Alu -3 130 1 1420 229 24 85 chr2 166944774 166944854 -83743000 + L1ME1 LINE L1 6078 6103 -63 1999 142 3 0 chr2 166944854 166945150 -83742704 - AluJb SINE Alu -15 297 1 1420 229 24 85 chr2 166945150 166945208 -83742646 + L1ME1 LINE L1 6103 6163 -3 21 0 0 0 chr2 166945303 166945324 -83742530 + AT_rich Low_complexity Low_complexity 1 21 0 27 18 6 0 chr2 166945470 166945538 -83742316 + AT_rich Low_complexity Low_complexity 1 34 0 298 265 36 12 chr2 166947839 166947922 -83739932 - MIR3 SINE MIR -14 194 110 1719 179 49 6 chr2 166948007 166948336 -83739518 + MER2 DNA MER2_type 3 345 0 2199 98 0 3 chr2 166948921 166949207 -83738647 - AluSq SINE Alu -28 285 1 406 333 20 44 chr2 166949212 166949461 -83738393 - L1ME4a LINE L1 -532 5589 5347 262 259 36 0 chr2 166949472 166949584 -83738270 - L1ME4a LINE L1 -816 5330 5215 939 286 86 30 chr2 166949667 166950527 -83737327 + L1M4 LINE L1 3685 4592 -1554 251 98 131 0 chr2 166950713 166950774 -83737080 - MADE1 DNA Mariner -11 69 1 2324 207 76 28 chr2 166950834 166951242 -83736612 + MLT1F1 LTR MaLR 2 444 -123 2080 133 0 3 chr2 166951242 166951536 -83736318 + AluSx SINE Alu 1 293 -19 2324 207 76 28 chr2 166951536 166951667 -83736187 + MLT1F1 LTR MaLR 444 567 0 23 54 0 0 chr2 166951715 166951752 -83736102 + AT_rich Low_complexity Low_complexity 1 37 0 369 270 0 45 chr2 166952764 166952828 -83735026 - MER94 DNA DNA -14 120 62 2380 112 112 0 chr2 166952828 166953213 -83734641 - MSTA LTR MaLR 0 428 1 369 270 0 45 chr2 166953213 166953259 -83734595 - MER94 DNA DNA -72 62 15 458 271 96 23 chr2 166953410 166953587 -83734267 + MIR SINE MIR 7 196 -66 1317 131 44 12 chr2 166953593 166953845 -83734009 - L1MA5 LINE L1 -5 6295 6036 1693 148 111 100 chr2 166953862 166954322 -83733532 - MLT1C LTR MaLR -2 465 1 954 311 96 19 chr2 166954454 166954923 -83732931 + MLT1J LTR MaLR 7 511 0 4078 74 20 0 chr2 166955601 166956144 -83731710 + MER41A LTR ERV1 1 554 0 4209 151 9 28 chr2 166957471 166958212 -83729642 - LTR8A LTR ERV1 0 727 1 800 339 45 16 chr2 166958789 166959170 -83728684 + L3 LINE CR1 768 1159 -418 246 278 175 48 chr2 166959232 166959358 -83728496 + L3 LINE CR1 1362 1503 -74 1854 128 97 34 chr2 166959737 166960088 -83727766 - MER93b LTR ERV1 0 373 1 4978 111 48 5 chr2 166960322 166961070 -83726784 - LTR17 LTR ERV1 0 780 1 2220 111 53 17 chr2 166961120 166961481 -83726373 - THE1C LTR MaLR -1 374 1 378 0 0 0 chr2 166962514 166962556 -83725298 + (TG)n Simple_repeat Simple_repeat 2 43 0 2094 106 7 0 chr2 166964325 166964634 -83723220 - AluSx SINE Alu 0 311 1 2390 227 68 21 chr2 166964639 166965344 -83722510 - L1ME2 LINE L1 -37 6127 5390 225 235 0 20 chr2 166965377 166965428 -83722426 + L2 LINE L2 3256 3305 -8 233 305 79 89 chr2 166965476 166965666 -83722188 + L3b LINE CR1 1377 1564 -19 928 240 20 10 chr2 166967242 166967438 -83720416 + AluJo SINE Alu 87 284 -28 684 255 50 84 chr2 166968719 166969123 -83718731 - MLT1I LTR MaLR -2 407 18 1705 173 7 0 chr2 166969639 166969965 -83717889 + AluJb SINE Alu 1 328 0 401 152 6 5 chr2 166970248 166970420 -83717434 - AluJb SINE Alu -55 257 3 290 257 37 15 chr2 166970489 166970625 -83717229 - L1MC4 LINE L1 -2 8040 7902 447 265 36 22 chr2 166970687 166970910 -83716944 - L1MC4 LINE L1 -128 7914 7689 191 111 0 28 chr2 166971296 166971332 -83716522 + (TA)n Simple_repeat Simple_repeat 2 36 0 392 210 8 65 chr2 166971341 166971465 -83716389 - L1MC4 LINE L1 -492 7550 7434 247 208 0 26 chr2 166972003 166972080 -83715774 + CT-rich Low_complexity Low_complexity 2 76 0 264 212 0 0 chr2 166972520 166972586 -83715268 + CT-rich Low_complexity Low_complexity 1 66 0 249 290 0 16 chr2 166973142 166973204 -83714650 - L2 LINE L2 -8 3305 3245 321 291 26 0 chr2 166973308 166973396 -83714458 + MIR3 SINE MIR 73 163 -45 4395 78 20 20 chr2 166974158 166974359 -83713495 - PABL_B LTR ERV1 -28 639 439 2382 99 3 0 chr2 166974359 166974663 -83713191 - AluSp SINE Alu -8 305 1 4395 78 20 20 chr2 166974663 166975100 -83712754 - PABL_B LTR ERV1 -227 440 1 189 0 0 0 chr2 166975138 166975159 -83712695 + (TTA)n Simple_repeat Simple_repeat 1 21 0 2019 166 98 42 chr2 166975756 166976233 -83711621 - MLT1D LTR MaLR -1 504 1 375 302 76 64 chr2 166976589 166977032 -83710822 - L1MEc LINE L1 -3633 2582 2177 198 153 51 0 chr2 166977140 166977199 -83710655 + (TA)n Simple_repeat Simple_repeat 1 62 0 26 0 0 0 chr2 166977358 166977384 -83710470 + AT_rich Low_complexity Low_complexity 1 26 0 26 64 0 0 chr2 166977432 166977479 -83710375 + AT_rich Low_complexity Low_complexity 1 47 0 380 172 11 4 chr2 166977667 166977757 -83710097 - L1M1 LINE L1 -411 5760 5683 703 181 101 85 chr2 166980808 166981166 -83706688 + MSTD LTR MaLR 1 396 0 2272 115 3 3 chr2 166981711 166982023 -83705831 + AluSq SINE Alu 1 312 -1 1722 187 3 31 chr2 166982335 166982656 -83705198 + AluJo SINE Alu 1 312 0 306 0 0 0 chr2 166982938 166982972 -83704882 + (TG)n Simple_repeat Simple_repeat 1 34 0 23 0 0 0 chr2 166983106 166983129 -83704725 + AT_rich Low_complexity Low_complexity 1 23 0 197 290 16 16 chr2 166984011 166984073 -83703781 - L2 LINE L2 0 3313 3252 198 91 0 0 chr2 166985192 166985225 -83702629 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 1223 130 24 10 chr2 166985259 166985466 -83702388 - LTR9 LTR ERV1 -208 404 195 1436 90 5 9 chr2 166985471 166985693 -83702161 - pTR5 LTR ERV1 -2046 392 172 321 202 32 21 chr2 166985696 166985790 -83702064 - LTR30 LTR ERV1 -80 642 548 4775 130 151 26 chr2 166985795 166986855 -83700999 - pTR5 LTR ERV1 -509 1929 738 963 119 28 34 chr2 166986885 166987061 -83700793 - LTR9 LTR ERV1 -437 175 1 1809 185 0 7 chr2 166987119 166987417 -83700437 + AluJo SINE Alu 1 296 -16 601 294 141 37 chr2 166988041 166988368 -83699486 + L2 LINE L2 2953 3313 0 2361 92 3 13 chr2 166988632 166988948 -83698906 - AluSp SINE Alu 0 313 1 319 333 146 6 chr2 166989343 166989508 -83698346 + MIR3 SINE MIR 14 201 -7 21 0 0 0 chr2 166990363 166990384 -83697470 + AT_rich Low_complexity Low_complexity 1 21 0 302 336 96 0 chr2 166990495 166990599 -83697255 - L1M4 LINE L1 -1300 4846 4733 362 315 68 29 chr2 166990821 166991094 -83696760 - L1M4 LINE L1 -1818 4328 4067 2244 113 54 25 chr2 166991094 166991448 -83696406 - THE1B LTR MaLR 0 364 1 362 315 68 29 chr2 166991448 166991474 -83696380 - L1M4 LINE L1 -2079 4067 4043 1412 191 44 37 chr2 166991474 166991768 -83696086 - AluJo SINE Alu -16 296 1 362 315 68 29 chr2 166991768 166992080 -83695774 - L1M4 LINE L1 -2103 4043 3692 473 202 137 77 chr2 166994880 166994980 -83692874 - MER5A DNA MER1_type -3 186 71 1867 124 37 33 chr2 166994980 166995279 -83692575 - AluSx SINE Alu -12 300 1 473 202 137 77 chr2 166995279 166995346 -83692508 - MER5A DNA MER1_type -118 71 9 1386 87 57 57 chr2 166995417 166995681 -83692173 + MER1B DNA MER1_type 1 264 -75 239 305 21 21 chr2 166995739 166995880 -83691974 - L1M4 LINE L1 -2521 3625 3485 446 309 174 23 chr2 166995897 166996327 -83691527 - L1M4 LINE L1 -2683 3463 2969 522 297 73 57 chr2 166996441 166996795 -83691059 - HAL1b LINE L1 -493 855 496 619 164 164 30 chr2 166998179 166998344 -83689510 + MER3 DNA MER1_type 15 201 -8 353 269 263 13 chr2 166998881 166999037 -83688817 + MIR SINE MIR 35 229 -33 1814 143 33 7 chr2 166999165 166999438 -83688416 + AluSx SINE Alu 1 280 -32 440 253 73 2 chr2 167000190 167000313 -83687541 - MIR SINE MIR -73 135 6 286 284 35 35 chr2 167000511 167000627 -83687227 - MIR SINE MIR -130 132 17 915 92 0 0 chr2 167000953 167001073 -83686781 + AluSg/x SINE Alu 187 306 -3 270 244 157 17 chr2 167001428 167001543 -83686311 - L2 LINE L2 -217 3096 2966 518 307 6 6 chr2 167001652 167001818 -83686036 + LTR33 LTR ERVL 33 198 -323 445 191 0 11 chr2 167001901 167001990 -83685864 - MLT1D LTR MaLR -416 89 2 415 294 40 51 chr2 167002716 167002893 -83684961 - MIR3 SINE MIR 0 208 34 2554 71 0 0 chr2 167003105 167003416 -83684438 + AluY SINE Alu 1 311 0 754 329 156 43 chr2 167004021 167004393 -83683461 + L2 LINE L2 1405 1734 -1580 2272 51 7 14 chr2 167004393 167004686 -83683168 - L1PA7 LINE L1 -3 6151 5861 754 329 156 43 chr2 167004686 167005487 -83682367 + L2 LINE L2 1734 2710 -604 237 289 26 13 chr2 167006054 167006130 -83681724 + L2 LINE L2 2698 2774 -540 286 375 48 57 chr2 167006341 167006656 -83681198 + L2 LINE L2 2845 3156 -116 2306 162 25 2 chr2 167010041 167010448 -83677406 - MSTB LTR MaLR -2 424 9 1494 147 0 121 chr2 167010451 167010798 -83677056 + AluY SINE Alu 1 305 -6 350 173 13 0 chr2 167010891 167010966 -83676888 + CT-rich Low_complexity Low_complexity 2 77 0 251 188 94 16 chr2 167011002 167011066 -83676788 - MLT1K LTR MaLR -2 586 518 200 170 19 0 chr2 167011706 167011759 -83676095 + (TA)n Simple_repeat Simple_repeat 2 55 0 1979 203 13 82 chr2 167011766 167012318 -83675536 - MLT2B3 LTR ERVL -40 514 1 189 283 38 0 chr2 167012571 167012624 -83675230 - L2 LINE L2 -482 2832 2778 2711 167 64 22 chr2 167013252 167013672 -83674182 - MER74A LTR ERVL 0 558 110 2327 89 3 19 chr2 167013672 167013988 -83673866 + AluSp SINE Alu 1 311 -2 2711 167 64 22 chr2 167013988 167014100 -83673754 - MER74A LTR ERVL -448 110 4 864 159 49 12 chr2 167014413 167014576 -83673278 + L1PA15 LINE L1 5991 6159 -6 7391 117 27 8 chr2 167014580 167015412 -83672442 - Tigger1 DNA MER2_type -111 2307 1445 2410 84 0 16 chr2 167015412 167015723 -83672131 - AluY SINE Alu -5 306 1 7391 117 27 8 chr2 167015723 167016075 -83671779 - Tigger1 DNA MER2_type -973 1445 1101 1633 159 56 47 chr2 167016076 167016165 -83671689 + MER2 DNA MER2_type 1 88 -256 2260 105 0 10 chr2 167016165 167016470 -83671384 + AluSq SINE Alu 1 302 -11 1633 159 56 47 chr2 167016470 167016720 -83671134 + MER2 DNA MER2_type 88 343 -1 248 242 91 0 chr2 167016741 167016807 -83671047 + MIR3 SINE MIR 120 191 -17 649 117 0 0 chr2 167017597 167017700 -83670154 - L1PA12 LINE L1 0 6168 6066 6039 156 55 19 chr2 167017712 167019685 -83668169 - L1PB1 LINE L1 -7 6144 4090 1587 188 12 9 chr2 167019682 167020017 -83667837 + L1PB1 LINE L1 3740 4075 -2071 * 5442 99 5 41 chr2 167020015 167020951 -83666903 - L1PA12 LINE L1 -85 6083 5175 405 0 0 0 chr2 167020951 167020996 -83666858 + (TA)n Simple_repeat Simple_repeat 2 46 0 5442 99 5 41 chr2 167020996 167021028 -83666826 - L1PA12 LINE L1 -993 5175 5143 24 53 0 0 chr2 167021242 167021280 -83666574 + AT_rich Low_complexity Low_complexity 1 38 0 929 199 6 11 chr2 167021288 167021464 -83666390 - FRAM SINE Alu -2 174 1 246 348 104 50 chr2 167021977 167022178 -83665676 + L2 LINE L2 2429 2640 -674 2084 170 47 8 chr2 167022261 167023225 -83664629 + L1M2 LINE L1 4255 5331 -981 180 0 0 0 chr2 167023225 167023245 -83664609 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2084 170 47 8 chr2 167023245 167023581 -83664273 + L1M2 LINE L1 5331 5652 -660 * 2618 203 6 4 chr2 167023575 167024113 -83663741 + L1MA7 LINE L1 3550 4088 -2058 2871 162 56 26 chr2 167024118 167024236 -83663618 + L1MA7 LINE L1 5662 5775 -516 267 31 0 0 chr2 167024236 167024268 -83663586 + (CA)n Simple_repeat Simple_repeat 1 32 0 2871 162 56 26 chr2 167024268 167024759 -83663095 + L1MA7 LINE L1 5775 6289 -2 695 289 66 12 chr2 167024863 167025105 -83662749 + MIR SINE MIR 8 262 0 30 100 0 0 chr2 167025227 167025327 -83662527 + AT_rich Low_complexity Low_complexity 1 100 0 180 290 160 47 chr2 167026110 167026279 -83661575 + L2 LINE L2 2859 3046 -226 259 316 86 50 chr2 167026359 167026498 -83661356 + MIR SINE MIR 35 178 -84 1838 245 34 14 chr2 167027051 167027549 -83660305 - L1ME2 LINE L1 -8 6156 5649 * 1964 232 62 23 chr2 167027547 167028241 -83659613 + L1M4 LINE L1 2185 2905 -3241 378 0 0 0 chr2 167028243 167028285 -83659569 + (CA)n Simple_repeat Simple_repeat 1 42 0 185 335 140 30 chr2 167028648 167028884 -83658970 + L3b LINE CR1 1299 1560 -23 270 116 0 0 chr2 167029054 167029097 -83658757 + (TC)n Simple_repeat Simple_repeat 2 44 0 192 158 0 0 chr2 167029833 167029871 -83657983 + A-rich Low_complexity Low_complexity 1 38 0 886 238 26 87 chr2 167030714 167031058 -83656796 + L2 LINE L2 2985 3307 -6 2263 103 0 0 chr2 167031218 167031510 -83656344 - AluSg SINE Alu -18 292 1 232 360 12 0 chr2 167031540 167031626 -83656228 - MIR SINE MIR -156 106 20 21 0 0 0 chr2 167031869 167031890 -83655964 + AT_rich Low_complexity Low_complexity 1 21 0 1146 86 0 0 chr2 167032376 167032516 -83655338 + AluY SINE Alu 5 144 -167 241 31 0 0 chr2 167032516 167032548 -83655306 + Alu SINE Alu 261 292 -10 1237 229 49 24 chr2 167032783 167033111 -83654743 - MER93a LTR ERV1 0 402 67 206 287 23 69 chr2 167033222 167033309 -83654545 - L3 LINE CR1 -227 1350 1268 2052 160 21 24 chr2 167033720 167034096 -83653758 - THE1C LTR MaLR 0 375 1 1381 226 34 0 chr2 167034134 167034426 -83653428 + AluJb SINE Alu 1 302 0 306 143 0 0 chr2 167034442 167034505 -83653349 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 436 316 37 0 chr2 167034530 167034666 -83653188 - MIR SINE MIR -121 141 1 31 26 0 0 chr2 167035024 167035062 -83652792 + AT_rich Low_complexity Low_complexity 1 38 0 2181 109 50 34 chr2 167035256 167035614 -83652240 + THE1B LTR MaLR 1 364 0 309 302 35 0 chr2 167035753 167035839 -83652015 - L2 LINE L2 -18 3295 3207 570 301 31 56 chr2 167036028 167036347 -83651507 + LTR16A1 LTR ERVL 147 457 0 25 31 0 0 chr2 167036375 167036407 -83651447 + AT_rich Low_complexity Low_complexity 1 32 0 1609 163 35 11 chr2 167036418 167036701 -83651153 + AluJo SINE Alu 1 290 -22 844 284 51 32 chr2 167036794 167037240 -83650614 - L2 LINE L2 -225 3088 2617 2070 264 128 50 chr2 167037240 167038070 -83649784 + MER45C DNA AcHobo 1 905 -676 604 236 8 0 chr2 167038070 167038193 -83649661 - FLAM_A SINE Alu -9 124 1 2070 264 128 50 chr2 167038193 167038245 -83649609 + MER45C DNA AcHobo 905 952 -1 770 265 10 10 chr2 167038246 167038442 -83649412 - L2 LINE L2 -690 2624 2429 183 328 103 34 chr2 167038701 167038905 -83648949 - L2 LINE L2 -944 2370 2153 339 96 0 0 chr2 167039522 167039574 -83648280 + (TC)n Simple_repeat Simple_repeat 1 52 0 2307 67 3 0 chr2 167039637 167039947 -83647907 - AluY SINE Alu 0 311 1 4204 147 18 40 chr2 167042438 167043165 -83644689 - MER50 LTR ERV1 -23 711 1 21 36 0 0 chr2 167043958 167043986 -83643868 + AT_rich Low_complexity Low_complexity 1 28 0 252 143 0 0 chr2 167044211 167044253 -83643601 + (TG)n Simple_repeat Simple_repeat 1 42 0 27 29 0 0 chr2 167044771 167044805 -83643049 + AT_rich Low_complexity Low_complexity 1 34 0 540 286 53 75 chr2 167045419 167045560 -83642294 + MIR SINE MIR 3 137 -125 1953 85 85 3 chr2 167045560 167045878 -83641976 - L1MA5A LINE L1 0 6297 5954 540 286 53 75 chr2 167045878 167046002 -83641852 + MIR SINE MIR 137 262 0 2192 99 3 7 chr2 167046510 167046813 -83641041 - AluSq SINE Alu -2 311 10 618 79 0 0 chr2 167046827 167046916 -83640938 + (TTCC)n Simple_repeat Simple_repeat 4 92 0 689 169 12 12 chr2 167046916 167047088 -83640766 + CT-rich Low_complexity Low_complexity 2 173 0 715 194 7 7 chr2 167047088 167047227 -83640627 - FRAM SINE Alu -38 138 1 470 278 140 81 chr2 167047280 167047723 -83640131 + MLT1K LTR MaLR 104 572 -16 1638 139 7 11 chr2 167047797 167048077 -83639777 - L1PA16 LINE L1 -2 6164 5886 462 262 129 25 chr2 167048202 167048404 -83639450 + MIR SINE MIR 22 244 -18 2023 149 20 9 chr2 167048784 167049126 -83638728 - MER7A DNA MER2_type -2 344 1 252 0 0 0 chr2 167049489 167049517 -83638337 + (A)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr2 167051922 167051947 -83635907 + AT_rich Low_complexity Low_complexity 1 25 0 2331 286 43 31 chr2 167055727 167056850 -83631004 - L2 LINE L2 0 3313 2170 381 300 96 43 chr2 167056904 167057134 -83630720 + MIR SINE MIR 7 248 -14 355 343 52 17 chr2 167057275 167057447 -83630407 - MIR3 SINE MIR -5 203 26 294 240 53 0 chr2 167058110 167058185 -83629669 - MIR SINE MIR -111 151 73 2550 46 0 0 chr2 167058747 167059051 -83628803 - AluY SINE Alu -7 304 1 25 51 0 0 chr2 167059396 167059435 -83628419 + AT_rich Low_complexity Low_complexity 1 39 0 1809 142 15 0 chr2 167059589 167059857 -83627997 - AluSx SINE Alu -27 285 14 284 365 24 0 chr2 167059986 167060071 -83627783 - L2 LINE L2 -45 3227 3141 1332 338 111 46 chr2 167060263 167061858 -83625996 - L2 LINE L2 -450 2864 1167 441 0 0 0 chr2 167061980 167062029 -83625825 + (TG)n Simple_repeat Simple_repeat 2 50 0 30 0 0 0 chr2 167062138 167062168 -83625686 + AT_rich Low_complexity Low_complexity 1 30 0 347 339 26 42 chr2 167062613 167062802 -83625052 - MIR SINE MIR -13 249 64 24 0 0 0 chr2 167066111 167066135 -83621719 + AT_rich Low_complexity Low_complexity 1 24 0 211 286 0 0 chr2 167066738 167066794 -83621060 + (TATG)n Simple_repeat Simple_repeat 4 59 0 369 266 276 5 chr2 167067975 167068174 -83619680 + MIR SINE MIR 7 259 -3 212 259 0 0 chr2 167071067 167071121 -83616733 + A-rich Low_complexity Low_complexity 2 55 0 21 0 0 0 chr2 167071267 167071288 -83616566 + AT_rich Low_complexity Low_complexity 1 21 0 220 224 112 84 chr2 167072039 167072182 -83615672 - MIR SINE MIR 0 262 116 266 180 16 0 chr2 167072832 167072893 -83614961 + GA-rich Low_complexity Low_complexity 4 65 0 239 264 11 0 chr2 167073358 167073449 -83614405 + GA-rich Low_complexity Low_complexity 1 92 0 2422 75 3 3 chr2 167074531 167074839 -83613015 + AluY SINE Alu 1 308 -3 1765 168 19 45 chr2 167074981 167075355 -83612499 - THE1B LTR MaLR 0 364 1 11775 91 2 2 chr2 167075355 167076936 -83610918 - THE1B-int LTR MaLR 0 1580 1 2024 136 19 45 chr2 167076936 167077310 -83610544 - THE1B LTR MaLR 0 364 1 815 291 173 3 chr2 167077416 167077787 -83610067 - MLT1K LTR MaLR -6 582 149 571 279 0 25 chr2 167080100 167080279 -83607575 - MIR SINE MIR -28 234 21 380 332 15 51 chr2 167080382 167080578 -83607276 + MER5A DNA MER1_type 1 189 0 22 56 0 0 chr2 167081403 167081439 -83606415 + AT_rich Low_complexity Low_complexity 1 36 0 449 308 114 14 chr2 167083030 167083241 -83604613 + MIR SINE MIR 21 252 -10 207 0 0 0 chr2 167084460 167084483 -83603371 + (T)n Simple_repeat Simple_repeat 1 23 0 21 36 0 0 chr2 167086046 167086074 -83601780 + AT_rich Low_complexity Low_complexity 1 28 0 35 41 0 0 chr2 167087513 167087562 -83600292 + AT_rich Low_complexity Low_complexity 1 49 0 267 293 24 55 chr2 167087843 167088007 -83599847 - MIR SINE MIR 0 262 104 245 341 22 0 chr2 167088083 167088174 -83599680 - L3 LINE CR1 -6 1571 1479 500 340 71 35 chr2 167088233 167088571 -83599283 - MLT1K LTR MaLR -38 550 201 8534 233 42 19 chr2 167088813 167092187 -83595667 + L1MB7 LINE L1 2674 6124 -60 381 307 48 6 chr2 167092186 167092352 -83595502 - L1MC/D LINE L1 -2006 5802 5630 * 1441 280 86 42 chr2 167092387 167093387 -83594467 + L1MEc LINE L1 810 1862 -4534 1683 136 38 0 chr2 167093387 167093652 -83594202 - L1PA15 LINE L1 -6 6159 5885 1441 280 86 42 chr2 167093652 167093722 -83594132 + L1MEc LINE L1 1862 1927 -4469 2331 70 0 3 chr2 167093735 167094033 -83593821 - AluY SINE Alu -14 297 1 2576 255 105 44 chr2 167094073 167094412 -83593442 + L1M4 LINE L1 3690 4007 -2139 2230 85 3 25 chr2 167094412 167094730 -83593124 + AluSq SINE Alu 1 311 -2 2576 255 105 44 chr2 167094730 167095729 -83592125 + L1M4 LINE L1 4007 5110 -1036 610 329 132 50 chr2 167095850 167096560 -83591294 - L2 LINE L2 -841 2473 1639 2496 56 0 0 chr2 167096560 167096866 -83590988 - AluY SINE Alu -5 306 1 610 329 132 50 chr2 167096866 167097263 -83590591 - L2 LINE L2 -1675 1639 1276 516 16 0 0 chr2 167099868 167099972 -83587882 + L1PA3 LINE L1 6091 6194 0 7090 89 13 4 chr2 167100883 167101918 -83585936 - L1P LINE L1 -3691 2455 1412 7059 57 5 0 chr2 167101919 167103070 -83584784 + L1PA7 LINE L1 4981 6146 -8 2005 151 0 0 chr2 167103550 167103849 -83584005 + AluSx SINE Alu 2 300 -12 2198 216 33 0 chr2 167104056 167104482 -83583372 - MLT1F1 LTR MaLR -44 523 84 195 42 0 0 chr2 167105723 167105747 -83582107 + (CA)n Simple_repeat Simple_repeat 2 25 0 419 154 210 5 chr2 167105752 167105947 -83581907 + L1MA8 LINE L1 5782 6016 -275 2985 140 0 0 chr2 167106052 167106510 -83581344 - L1PA15 LINE L1 -211 5954 5497 2297 133 19 68 chr2 167106506 167106934 -83580920 + L1P4 LINE L1 4876 5323 -845 * 255 31 0 0 chr2 167106934 167106966 -83580888 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2297 133 19 68 chr2 167106966 167107110 -83580744 + L1P4 LINE L1 5323 5428 -740 2004 114 3 0 chr2 167107110 167107454 -83580400 + AluSx SINE Alu 1 312 0 2297 133 19 68 chr2 167107454 167107504 -83580350 + L1P4 LINE L1 5428 5479 -689 545 220 42 0 chr2 167107504 167107622 -83580232 + Tigger1 DNA MER2_type 2296 2418 0 2159 110 3 7 chr2 167108640 167108949 -83578905 + AluSx SINE Alu 1 308 -4 22 70 0 0 chr2 167109820 167109863 -83577991 + AT_rich Low_complexity Low_complexity 1 43 0 437 339 102 18 chr2 167110421 167110860 -83576994 + L1 LINE L1 3558 4033 -2113 977 227 56 28 chr2 167111261 167111547 -83576307 - MER58B DNA MER1_type -3 338 45 1640 248 62 20 chr2 167111798 167112249 -83575605 + MER92B LTR ERV1 53 522 -114 28 0 0 0 chr2 167112408 167112436 -83575418 + AT_rich Low_complexity Low_complexity 1 28 0 614 295 51 0 chr2 167112905 167113122 -83574732 + MIR SINE MIR 31 258 -4 511 228 32 44 chr2 167113122 167113280 -83574574 - LTR33 LTR ERVL 0 521 366 28 29 0 0 chr2 167113925 167113960 -83573894 + AT_rich Low_complexity Low_complexity 1 35 0 354 80 0 0 chr2 167114405 167114455 -83573399 + (TG)n Simple_repeat Simple_repeat 1 50 0 296 302 103 8 chr2 167115722 167115848 -83572006 - L2 LINE L2 -12 3301 3164 4677 297 88 46 chr2 167116118 167118737 -83569117 - L2 LINE L2 -5 3308 616 398 248 159 0 chr2 167119165 167119278 -83568576 - MER94 DNA DNA -2 132 2 2544 112 5 5 chr2 167119414 167119789 -83568065 - THE1C LTR MaLR 0 375 1 1833 160 13 7 chr2 167120651 167120977 -83566877 - AluSx SINE Alu 0 312 5 2193 105 10 0 chr2 167121328 167121624 -83566230 - AluSx SINE Alu -13 299 1 236 284 80 45 chr2 167123120 167123208 -83564646 + L2 LINE L2 3155 3245 -27 324 70 0 0 chr2 167123769 167123812 -83564042 + (CA)n Simple_repeat Simple_repeat 2 44 0 180 319 35 78 chr2 167123908 167124024 -83563830 + MIR3 SINE MIR 59 169 -39 324 0 0 0 chr2 167124247 167124283 -83563571 + (CA)n Simple_repeat Simple_repeat 1 36 0 24 32 0 0 chr2 167127202 167127233 -83560621 + AT_rich Low_complexity Low_complexity 1 31 0 827 319 129 4 chr2 167127395 167127942 -83559912 + L2 LINE L2 2677 3289 -24 191 149 0 43 chr2 167128436 167128483 -83559371 + (CATA)n Simple_repeat Simple_repeat 2 46 0 551 291 148 9 chr2 167129278 167129488 -83558366 - MIR SINE MIR -3 259 21 245 167 19 0 chr2 167131322 167131376 -83556478 + (TA)n Simple_repeat Simple_repeat 2 56 0 258 300 161 0 chr2 167132750 167132880 -83554974 + L3 LINE CR1 1355 1505 -72 183 340 0 0 chr2 167132973 167133023 -83554831 - MIR SINE MIR -59 149 100 2644 186 76 10 chr2 167133024 167133504 -83554350 + MLT2B3 LTR ERVL 2 520 -34 845 45 9 0 chr2 167133504 167133614 -83554240 + (TCTA)n Simple_repeat Simple_repeat 2 112 0 2644 186 76 10 chr2 167133614 167133648 -83554206 + MLT2B3 LTR ERVL 520 550 -4 1913 69 120 14 chr2 167133678 167133953 -83553901 + AluY SINE Alu 1 304 -7 530 323 40 24 chr2 167134192 167134440 -83553414 + MLT1J2 LTR MaLR 5 256 -194 201 373 65 56 chr2 167136027 167136333 -83551521 + L2 LINE L2 2667 2975 -339 2003 75 3 150 chr2 167136588 167136948 -83550906 + AluSq SINE Alu 1 307 -6 189 284 190 17 chr2 167137341 167137457 -83550397 - L2 LINE L2 -7 3306 3171 1583 122 8 8 chr2 167139085 167139332 -83548522 - L1PA11 LINE L1 0 6174 5928 249 118 0 0 chr2 167139603 167139637 -83548217 - MSTA LTR MaLR -389 39 6 368 234 125 8 chr2 167139637 167139765 -83548089 + MIR SINE MIR 80 222 -40 180 214 0 0 chr2 167140143 167140199 -83547655 + (CA)n Simple_repeat Simple_repeat 2 57 0 2255 119 3 0 chr2 167140251 167140562 -83547292 + AluSx SINE Alu 1 312 0 2146 148 55 33 chr2 167140619 167141038 -83546816 + MSTA LTR MaLR 1 428 0 966 153 0 7 chr2 167141048 167141198 -83546656 + MLT1A1 LTR MaLR 1 149 -216 2596 188 12 35 chr2 167141199 167141769 -83546085 + L1MB8 LINE L1 5621 6177 -1 235 292 68 42 chr2 167141848 167142084 -83545770 - L2 LINE L2 -1234 2080 1839 546 305 39 117 chr2 167143240 167143837 -83544017 + MLT1K LTR MaLR 39 588 0 214 195 37 37 chr2 167144513 167144595 -83543259 + (TA)n Simple_repeat Simple_repeat 1 82 0 6746 65 18 1 chr2 167145879 167147085 -83540769 + L1PA8 LINE L1 4942 6163 -9 21 36 0 0 chr2 167147189 167147217 -83540637 + AT_rich Low_complexity Low_complexity 1 28 0 1191 330 41 11 chr2 167147217 167147757 -83540097 + MLT1K LTR MaLR 25 580 -8 343 315 70 14 chr2 167148030 167148173 -83539681 + L2 LINE L2 3122 3272 0 26 0 0 0 chr2 167149943 167149969 -83537885 + AT_rich Low_complexity Low_complexity 1 26 0 431 232 106 32 chr2 167149982 167150266 -83537588 - L1MC5 LINE L1 -48 7913 7609 561 283 64 17 chr2 167150705 167150878 -83536976 - MIR SINE MIR -10 252 72 244 174 14 14 chr2 167151641 167151710 -83536144 + CT-rich Low_complexity Low_complexity 1 69 0 355 360 50 18 chr2 167151918 167152201 -83535653 + L2 LINE L2 2245 2536 -778 713 228 25 103 chr2 167152969 167153289 -83534565 + L2 LINE L2 3019 3313 0 22 0 0 0 chr2 167154136 167154158 -83533696 + AT_rich Low_complexity Low_complexity 1 22 0 1527 271 97 24 chr2 167155801 167156014 -83531840 - L1ME3A LINE L1 -14 6156 5960 1397 191 26 43 chr2 167156014 167156317 -83531537 - AluJo SINE Alu -12 300 3 1527 271 97 24 chr2 167156317 167156775 -83531079 - L1ME3A LINE L1 -210 5960 5436 2397 98 3 62 chr2 167157882 167158269 -83529585 - THE1B LTR MaLR 0 364 1 544 141 174 16 chr2 167158305 167158426 -83529428 + MIR SINE MIR 123 262 0 1309 215 82 77 chr2 167158586 167159051 -83528803 + MLT1C LTR MaLR 1 467 0 22 0 0 0 chr2 167160534 167160556 -83527298 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 167161001 167161023 -83526831 + (A)n Simple_repeat Simple_repeat 1 22 0 24 91 0 0 chr2 167161735 167161801 -83526053 + AT_rich Low_complexity Low_complexity 1 66 0 247 435 21 10 chr2 167162873 167163066 -83524788 + MIR3 SINE MIR 7 201 -7 403 274 96 0 chr2 167163288 167163423 -83524431 + MIR SINE MIR 84 231 -31 24 32 0 0 chr2 167165331 167165362 -83522492 + AT_rich Low_complexity Low_complexity 1 31 0 265 311 17 34 chr2 167166203 167166322 -83521532 - MER102a DNA MER1_type -9 321 205 595 263 17 23 chr2 167167429 167167604 -83520250 + MER5B DNA MER1_type 2 175 -3 387 133 67 0 chr2 167169447 167169522 -83518332 + L1MC2 LINE L1 6259 6338 -6 385 223 50 29 chr2 167171803 167171942 -83515912 - Charlie5 DNA MER1_type -28 2584 2443 292 207 17 0 chr2 167171957 167172015 -83515839 - Charlie5 DNA MER1_type -2548 64 6 539 299 109 11 chr2 167172406 167172580 -83515274 + MIR SINE MIR 71 261 -1 770 296 105 36 chr2 167173032 167173682 -83514172 - L2 LINE L2 0 3313 2615 701 176 127 18 chr2 167173900 167174065 -83513789 + MER5A DNA MER1_type 7 189 0 28 0 0 0 chr2 167174144 167174172 -83513682 + AT_rich Low_complexity Low_complexity 1 28 0 331 176 16 0 chr2 167174309 167174434 -83513420 + (TA)n Simple_repeat Simple_repeat 2 128 0 452 297 5 72 chr2 167175943 167176097 -83511757 + MER5A DNA MER1_type 7 147 -42 2251 77 0 53 chr2 167176097 167176420 -83511434 - AluSg SINE Alu -4 306 1 452 297 5 72 chr2 167176420 167176460 -83511394 + MER5A DNA MER1_type 147 188 -1 241 266 195 19 chr2 167177139 167177293 -83510561 - L2 LINE L2 -463 2851 2671 229 233 68 0 chr2 167177811 167177884 -83509970 + GA-rich Low_complexity Low_complexity 2 79 0 2282 88 3 0 chr2 167178631 167178937 -83508917 - AluY SINE Alu -3 308 2 23 0 0 0 chr2 167179017 167179040 -83508814 + AT_rich Low_complexity Low_complexity 1 23 0 498 338 47 20 chr2 167179275 167179571 -83508283 - MLT1L LTR MaLR -136 479 176 258 32 0 0 chr2 167180414 167180445 -83507409 + (T)n Simple_repeat Simple_repeat 1 31 0 534 303 25 19 chr2 167180480 167180642 -83507212 + MIR SINE MIR 100 262 0 1038 151 18 0 chr2 167181930 167182096 -83505758 - FRAM SINE Alu -6 170 2 452 311 161 8 chr2 167182118 167182372 -83505482 + L2 LINE L2 2235 2527 -787 511 276 124 29 chr2 167182424 167182634 -83505220 - MIR SINE MIR -13 249 20 5741 200 76 16 chr2 167182712 167184085 -83503769 + Charlie1a DNA MER1_type 1 1455 0 248 289 66 144 chr2 167184203 167184704 -83503150 + L2 LINE L2 2809 3270 -2 32 81 0 0 chr2 167184910 167184984 -83502870 + AT_rich Low_complexity Low_complexity 1 74 0 1862 134 3 14 chr2 167186399 167186691 -83501163 + AluJb SINE Alu 1 289 -23 22 0 0 0 chr2 167186691 167186713 -83501141 + AT_rich Low_complexity Low_complexity 1 22 0 796 282 62 4 chr2 167187446 167187687 -83500167 - MIR SINE MIR -1 261 7 318 294 7 68 chr2 167187691 167187837 -83500017 + L3 LINE CR1 1222 1358 -219 318 161 0 119 chr2 167188154 167188272 -83499582 - L1MA7 LINE L1 -2 6289 6186 304 229 286 7 chr2 167189866 167190006 -83497848 - MER5A DNA MER1_type -1 188 10 895 199 0 0 chr2 167190721 167190877 -83496977 + FRAM SINE Alu 1 156 -20 859 234 87 0 chr2 167191408 167191639 -83496215 - MIR SINE MIR 0 262 12 486 266 162 13 chr2 167193323 167193477 -83494377 - MER5B DNA MER1_type -1 177 1 218 293 24 24 chr2 167193518 167193600 -83494254 + L3 LINE CR1 1489 1570 -7 267 175 0 0 chr2 167194912 167194969 -83492885 + CT-rich Low_complexity Low_complexity 3 59 0 21 36 0 0 chr2 167195329 167195357 -83492497 + AT_rich Low_complexity Low_complexity 1 28 0 1647 107 0 4 chr2 167197801 167198026 -83489828 + AluSg/x SINE Alu 74 297 -15 22 0 0 0 chr2 167198394 167198416 -83489438 + AT_rich Low_complexity Low_complexity 1 22 0 260 250 0 16 chr2 167199620 167199684 -83488170 + (CA)n Simple_repeat Simple_repeat 2 64 0 22 0 0 0 chr2 167199844 167199866 -83487988 + AT_rich Low_complexity Low_complexity 1 22 0 522 205 108 12 chr2 167199899 167200117 -83487737 + Charlie5 DNA MER1_type 2 2624 0 727 294 21 13 chr2 167203487 167203725 -83484129 + MIR SINE MIR 12 251 -11 375 141 0 0 chr2 167203761 167203825 -83484029 + (A)n Simple_repeat Simple_repeat 1 64 0 805 211 56 0 chr2 167203827 167203988 -83483866 + AluJo SINE Alu 120 289 -23 1743 155 3 14 chr2 167203989 167204280 -83483574 + AluSx SINE Alu 1 288 -24 25 0 0 0 chr2 167204280 167204305 -83483549 + AT_rich Low_complexity Low_complexity 1 25 0 1328 116 5 20 chr2 167204486 167204685 -83483169 - Charlie3 DNA MER1_type -4 2706 2511 502 118 0 13 chr2 167204685 167204761 -83483093 - AluS SINE Alu -238 75 1 2363 58 7 0 chr2 167204774 167205068 -83482786 - AluY SINE Alu -3 308 13 9697 166 117 39 chr2 167205109 167205268 -83482586 + L1MC3 LINE L1 5110 5255 -2530 1591 182 3 24 chr2 167205268 167205586 -83482268 + AluJb SINE Alu 1 312 0 9697 166 117 39 chr2 167205586 167207720 -83480134 + L1MC3 LINE L1 5255 7584 -201 2407 84 0 0 chr2 167207720 167208028 -83479826 + AluY SINE Alu 1 308 -3 9697 166 117 39 chr2 167208028 167208078 -83479776 + L1MC3 LINE L1 7584 7629 -156 704 157 9 0 chr2 167208078 167208193 -83479661 + FLAM_C SINE Alu 1 116 -27 260 244 58 0 chr2 167208227 167208313 -83479541 + L1MC3 LINE L1 7695 7785 0 23 0 0 29 chr2 167208370 167208387 -83479467 + AT_rich Low_complexity Low_complexity 1 17 -16 1607 174 3 22 chr2 167208387 167208704 -83479150 - AluY SINE Alu 0 311 1 23 0 0 29 chr2 167208704 167208720 -83479134 + AT_rich Low_complexity Low_complexity 17 33 0 1770 178 3 0 chr2 167209229 167209521 -83478333 + AluJb SINE Alu 1 293 -19 335 89 38 38 chr2 167209522 167209601 -83478253 + GA-rich Low_complexity Low_complexity 1 79 0 23 0 0 0 chr2 167210748 167210771 -83477083 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr2 167210920 167210941 -83476913 + (A)n Simple_repeat Simple_repeat 1 21 0 1601 233 99 26 chr2 167211174 167211978 -83475876 - L1ME LINE L1 -634 5597 4713 1238 39 7 0 chr2 167212002 167212155 -83475699 - L1PA5 LINE L1 -7 6147 5994 2407 25 0 0 chr2 167212155 167212432 -83475422 + L1P2 LINE L1 5454 5730 -424 3082 256 86 22 chr2 167212460 167213516 -83474338 - L1ME LINE L1 -5237 1159 36 26 0 0 0 chr2 167213978 167214004 -83473850 + AT_rich Low_complexity Low_complexity 1 26 0 2280 95 3 0 chr2 167215455 167215750 -83472104 + AluSx SINE Alu 1 296 -16 22 56 0 0 chr2 167216388 167216424 -83471430 + AT_rich Low_complexity Low_complexity 1 36 0 302 308 206 0 chr2 167216766 167216873 -83470981 - L2 LINE L2 -5 3267 3139 21 0 0 0 chr2 167217238 167217259 -83470595 + AT_rich Low_complexity Low_complexity 1 21 0 348 245 19 0 chr2 167218402 167218561 -83469293 + (TA)n Simple_repeat Simple_repeat 1 162 0 284 276 211 7 chr2 167219688 167219840 -83468014 + MIR SINE MIR 5 187 -75 1162 309 71 19 chr2 167220034 167220510 -83467344 - L2 LINE L2 0 3313 2813 21 57 0 0 chr2 167220893 167220928 -83466926 + AT_rich Low_complexity Low_complexity 1 35 0 343 352 28 22 chr2 167221686 167221868 -83465986 + MER5A DNA MER1_type 2 184 -5 1880 144 0 3 chr2 167221878 167222206 -83465648 + AluSx SINE Alu 1 327 0 197 0 0 67 chr2 167222744 167222774 -83465080 + (TATATG)n Simple_repeat Simple_repeat 2 29 0 23 0 0 0 chr2 167223065 167223088 -83464766 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 167223852 167223879 -83463975 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 167226464 167226487 -83461367 + AT_rich Low_complexity Low_complexity 1 23 0 190 243 29 43 chr2 167228108 167228178 -83459676 + L2 LINE L2 1950 2018 -1296 552 271 60 40 chr2 167228280 167228521 -83459333 + MIR SINE MIR 4 248 -14 456 316 36 41 chr2 167228745 167228941 -83458913 + MIR3 SINE MIR 10 204 -4 22 0 0 0 chr2 167229927 167229949 -83457905 + AT_rich Low_complexity Low_complexity 1 22 0 1767 138 57 20 chr2 167231286 167231582 -83456272 + AluSx SINE Alu 1 307 -5 8303 29 0 0 chr2 167231586 167232901 -83454953 - L1PA3 LINE L1 -452 5703 4389 3371 50 0 0 chr2 167232901 167233310 -83454544 + L1PA3 LINE L1 5721 6136 -19 30 45 0 0 chr2 167233328 167233372 -83454482 + AT_rich Low_complexity Low_complexity 1 44 0 37 0 0 0 chr2 167233750 167233787 -83454067 + AT_rich Low_complexity Low_complexity 1 37 0 263 321 95 22 chr2 167235090 167235227 -83452627 + MIR SINE MIR 46 192 -70 22 0 0 0 chr2 167235972 167235994 -83451860 + AT_rich Low_complexity Low_complexity 1 22 0 204 40 0 0 chr2 167236110 167236135 -83451719 + (CA)n Simple_repeat Simple_repeat 2 26 0 231 36 0 0 chr2 167236475 167236503 -83451351 + (TC)n Simple_repeat Simple_repeat 1 28 0 231 274 0 20 chr2 167236682 167236733 -83451121 + L2 LINE L2 3255 3304 -9 1778 161 3 10 chr2 167237569 167237861 -83449993 + AluJb SINE Alu 1 290 -22 704 178 7 14 chr2 167238250 167238543 -83449311 + GA-rich Low_complexity Low_complexity 1 291 0 205 379 0 0 chr2 167239139 167239205 -83448649 - L2 LINE L2 -3 3269 3204 2203 78 0 45 chr2 167239313 167239621 -83448233 + AluY SINE Alu 1 294 -17 24 0 0 0 chr2 167240834 167240858 -83446996 + AT_rich Low_complexity Low_complexity 1 24 0 218 180 40 0 chr2 167241594 167241644 -83446210 + (TA)n Simple_repeat Simple_repeat 1 52 0 351 113 0 0 chr2 167242670 167242723 -83445131 + (A)n Simple_repeat Simple_repeat 1 53 0 1657 179 0 63 chr2 167245719 167245863 -83441991 + AluJb SINE Alu 1 116 -196 2392 77 0 0 chr2 167245863 167246163 -83441691 + AluY SINE Alu 1 300 -11 1657 179 0 63 chr2 167246163 167246337 -83441517 + AluJb SINE Alu 116 299 -13 29 47 0 0 chr2 167247112 167247155 -83440699 + AT_rich Low_complexity Low_complexity 1 43 0 227 221 0 13 chr2 167247382 167247459 -83440395 + (TATATG)n Simple_repeat Simple_repeat 4 79 0 186 43 0 0 chr2 167248085 167248108 -83439746 + (A)n Simple_repeat Simple_repeat 1 23 0 1118 206 31 76 chr2 167249690 167249981 -83437873 + AluJo SINE Alu 6 283 -29 35 41 0 0 chr2 167249981 167250030 -83437824 + AT_rich Low_complexity Low_complexity 1 49 0 26 64 0 0 chr2 167251033 167251080 -83436774 + AT_rich Low_complexity Low_complexity 1 47 0 341 368 76 18 chr2 167253310 167253481 -83434373 - MIR3 SINE MIR -25 183 3 423 0 0 0 chr2 167253521 167253568 -83434286 + (TG)n Simple_repeat Simple_repeat 2 48 0 2306 81 3 3 chr2 167253704 167253999 -83433855 - AluSq SINE Alu -17 296 2 435 327 105 40 chr2 167254732 167255188 -83432666 - L2 LINE L2 0 3313 2828 1467 261 146 68 chr2 167255318 167256127 -83431727 - L2 LINE L2 -596 2718 1847 26 0 0 0 chr2 167256352 167256378 -83431476 + AT_rich Low_complexity Low_complexity 1 26 0 853 299 30 0 chr2 167256928 167257162 -83430692 - MIR SINE MIR -17 245 5 187 277 134 27 chr2 167257202 167257314 -83430540 - MIR SINE MIR -75 187 64 21 36 0 0 chr2 167257724 167257752 -83430102 + AT_rich Low_complexity Low_complexity 1 28 0 293 298 187 23 chr2 167257845 167258198 -83429656 + L2 LINE L2 2239 2649 -665 409 257 129 0 chr2 167258341 167258481 -83429373 - MIR SINE MIR 0 262 105 259 298 53 0 chr2 167258913 167259007 -83428847 - L1MC/D LINE L1 -2013 5795 5697 950 188 0 0 chr2 167259174 167259334 -83428520 - FRAM SINE Alu -15 161 2 401 286 139 41 chr2 167259872 167260211 -83427643 - HAL1 LINE L1 -2112 395 24 653 280 125 72 chr2 167260246 167260917 -83426937 - L1MC/D LINE L1 -826 5320 4614 181 395 42 25 chr2 167261650 167261769 -83426085 + MIR3 SINE MIR 3 123 -85 1608 173 3 36 chr2 167262516 167262822 -83425032 - AluJo SINE Alu -14 298 3 865 178 19 13 chr2 167263337 167263494 -83424360 + MER105 DNA DNA 27 184 -20 243 342 52 32 chr2 167263518 167263673 -83424181 + MIR SINE MIR 16 173 -89 857 161 136 0 chr2 167263821 167263976 -83423878 - MER46A DNA MER2_type -60 176 1 228 300 271 14 chr2 167264845 167264985 -83422869 - MIR3 SINE MIR -3 205 30 189 94 0 0 chr2 167265303 167265335 -83422519 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2318 50 4 0 chr2 167265337 167265616 -83422238 - AluY SINE Alu -31 280 1 1369 86 0 11 chr2 167266353 167266540 -83421314 - MER107 DNA MER1_type 0 197 13 240 307 102 11 chr2 167270166 167270254 -83417600 + L2 LINE L2 3172 3267 -5 289 267 23 0 chr2 167271246 167271341 -83416513 - MIR SINE MIR -76 132 36 1693 172 27 7 chr2 167271981 167272278 -83415576 - AluJo SINE Alu -9 303 1 22 35 0 0 chr2 167276266 167276295 -83411559 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 167276965 167276990 -83410864 + AT_rich Low_complexity Low_complexity 1 25 0 2376 100 0 6 chr2 167277883 167278194 -83409660 + AluSg SINE Alu 1 309 -1 22 35 0 0 chr2 167278364 167278393 -83409461 + AT_rich Low_complexity Low_complexity 1 29 0 297 330 58 40 chr2 167278503 167278676 -83409178 + MIR3 SINE MIR 21 196 -12 425 161 0 0 chr2 167279234 167279315 -83408539 + AluS SINE Alu 229 309 0 35 24 0 0 chr2 167279353 167279395 -83408459 + AT_rich Low_complexity Low_complexity 1 42 0 480 72 0 0 chr2 167279480 167279549 -83408305 + (TAGA)n Simple_repeat Simple_repeat 3 71 0 327 291 25 15 chr2 167279908 167280104 -83407750 + L1M4 LINE L1 3587 3784 -2362 2718 271 57 29 chr2 167280115 167281064 -83406790 + L1M4b LINE L1 12 1225 -5634 4332 102 22 28 chr2 167281317 167281985 -83405869 - MER4A LTR ERV1 0 664 1 336 269 7 87 chr2 167282187 167282336 -83405518 + L1M4b LINE L1 1205 1341 -5518 * 1932 265 54 13 chr2 167282320 167283025 -83404829 + L1M4b LINE L1 1620 2353 -4606 1522 146 11 14 chr2 167283122 167283402 -83404452 - L1MA8 LINE L1 -20 6271 5993 329 326 111 22 chr2 167283860 167284041 -83403813 + MIR SINE MIR 1 197 -65 2326 153 47 2 chr2 167284068 167284473 -83403381 - MSTB LTR MaLR -3 423 1 1712 174 7 3 chr2 167285326 167285619 -83402235 - AluJo SINE Alu -18 294 1 379 255 47 9 chr2 167286112 167286218 -83401636 + MLT1K LTR MaLR 136 245 -343 1549 249 54 39 chr2 167286291 167286757 -83401097 + MER74B LTR ERVL 56 528 -94 284 143 20 0 chr2 167287013 167287062 -83400792 + MLT1K LTR MaLR 506 555 -33 833 168 34 50 chr2 167287329 167287508 -83400346 + MLT1B LTR MaLR 215 390 0 815 292 50 30 chr2 167287897 167288294 -83399560 + MLT1I LTR MaLR 2 406 -3 320 287 116 37 chr2 167288775 167289043 -83398811 - L1M4 LINE L1 -1125 5021 4733 846 184 30 4 chr2 167289073 167289248 -83398606 + LTR8A LTR ERV1 1 157 -384 7514 181 94 21 chr2 167289251 167290804 -83397050 - MER52A LTR ERV1 0 1755 5 1980 189 29 90 chr2 167290801 167291357 -83396497 + LTR8 LTR ERV1 170 691 0 * 2687 275 95 49 chr2 167291369 167293101 -83394753 - L1M4 LINE L1 -1453 4693 3041 1375 174 35 90 chr2 167293101 167293412 -83394442 + AluJo SINE Alu 1 294 -18 2687 275 95 49 chr2 167293412 167293428 -83394426 - L1M4 LINE L1 -3105 3041 3027 2474 287 48 32 chr2 167293428 167294139 -83393715 + MER72 LTR ERV1 1 722 0 2687 275 95 49 chr2 167294139 167294504 -83393350 - L1M4 LINE L1 -3119 3027 2483 233 268 0 14 chr2 167294777 167294848 -83393006 - MLT2F LTR ERVL -593 70 1 2694 185 16 101 chr2 167295045 167295114 -83392740 + LTR8 LTR ERV1 1 74 -617 1921 141 3 10 chr2 167295114 167295418 -83392436 - AluSx SINE Alu -8 304 3 2694 185 16 101 chr2 167295418 167296103 -83391751 + LTR8 LTR ERV1 74 691 0 27 0 0 0 chr2 167296205 167296232 -83391622 + AT_rich Low_complexity Low_complexity 1 27 0 211 211 0 39 chr2 167298266 167298318 -83389536 + CT-rich Low_complexity Low_complexity 1 50 0 384 22 0 0 chr2 167298473 167298518 -83389336 + (CA)n Simple_repeat Simple_repeat 1 45 0 325 301 27 30 chr2 167298891 167299158 -83388696 + CT-rich Low_complexity Low_complexity 1 266 0 266 260 10 0 chr2 167299228 167299328 -83388526 + CT-rich Low_complexity Low_complexity 5 105 0 355 257 114 50 chr2 167299872 167300074 -83387780 - MIR SINE MIR 0 262 48 1470 198 18 3 chr2 167300110 167300393 -83387461 + AluJb SINE Alu 3 289 -23 351 299 79 8 chr2 167300806 167300933 -83386921 - L2 LINE L2 -14 3299 3164 2022 145 42 24 chr2 167301420 167301751 -83386103 + MER1B DNA MER1_type 1 337 0 513 276 86 21 chr2 167302116 167302359 -83385495 - MIR SINE MIR -3 259 1 2217 105 7 0 chr2 167302411 167302705 -83385149 + AluSg SINE Alu 1 296 -14 3026 118 22 0 chr2 167303085 167303499 -83384355 + LTR46 LTR ERV1 1 427 -33 441 0 0 0 chr2 167303499 167303548 -83384306 + (TG)n Simple_repeat Simple_repeat 2 50 0 3026 118 22 0 chr2 167303548 167303582 -83384272 + LTR46 LTR ERV1 427 459 -1 881 122 0 7 chr2 167303595 167303743 -83384111 + (TTC)n Simple_repeat Simple_repeat 2 148 0 2154 110 0 0 chr2 167303745 167304027 -83383827 - AluSq SINE Alu -31 282 1 384 282 27 74 chr2 167305494 167305643 -83382211 - MIR SINE MIR -38 224 83 512 285 82 43 chr2 167305647 167306060 -83381794 + MLT1H1 LTR MaLR 1 415 -175 25 31 0 0 chr2 167306177 167306209 -83381645 + AT_rich Low_complexity Low_complexity 1 32 0 618 92 0 0 chr2 167306270 167306357 -83381497 - L1PA11 LINE L1 0 6174 6088 6324 191 35 21 chr2 167306496 167307182 -83380672 + Charlie1a DNA MER1_type 1 676 -2085 1634 141 63 19 chr2 167307182 167307480 -83380374 + AluJb SINE Alu 1 310 0 6324 191 35 21 chr2 167307480 167308227 -83379627 + Charlie1a DNA MER1_type 676 1455 0 2098 176 97 103 chr2 167308346 167309044 -83378810 - LTR8A LTR ERV1 0 727 34 11280 236 18 26 chr2 167310122 167311724 -83376130 - L1MC1 LINE L1 -6 6396 4782 1540 122 36 0 chr2 167311724 167311946 -83375908 - MER30 DNA MER1_type 0 230 1 11280 236 18 26 chr2 167311946 167315525 -83372329 - L1MC1 LINE L1 -1620 4782 1313 1055 218 56 48 chr2 167315531 167315783 -83372071 + AluJo SINE Alu 35 288 -24 2484 67 0 0 chr2 167316106 167316405 -83371449 + AluY SINE Alu 1 299 -12 194 222 89 0 chr2 167316839 167316884 -83370970 - L2 LINE L2 -3 3310 3262 250 217 67 0 chr2 167316971 167317031 -83370823 - MLT1K LTR MaLR -15 573 510 2845 7 0 0 chr2 167317373 167317681 -83370173 + AluY SINE Alu 1 308 -3 260 271 73 10 chr2 167318684 167318780 -83369074 + MIR SINE MIR 161 262 0 17885 142 41 17 chr2 167319322 167322335 -83365519 + L1PA3 LINE L1 3 3120 -3742 20291 28 5 0 chr2 167322335 167325546 -83362308 + L1PA3 LINE L1 3655 6871 0 17885 142 41 17 chr2 167325546 167326320 -83361534 + L1PA3 LINE L1 3120 3874 -2988 3149 158 25 1 chr2 167326363 167327781 -83360073 + L1PB1 LINE L1 4613 6150 -1 25 0 0 0 chr2 167327797 167327822 -83360032 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr2 167328074 167328111 -83359743 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 167328184 167328205 -83359649 + AT_rich Low_complexity Low_complexity 1 21 0 196 246 277 15 chr2 167329306 167329371 -83358483 - L2 LINE L2 -26 3287 3206 594 269 63 6 chr2 167329736 167329911 -83357943 + MIR SINE MIR 3 187 -75 2246 206 25 37 chr2 167329932 167330494 -83357360 + MER74A LTR ERVL 2 556 -2 1819 112 34 78 chr2 167330516 167330711 -83357143 - AluSx SINE Alu -4 308 131 315 0 0 0 chr2 167330711 167330746 -83357108 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1819 112 34 78 chr2 167330746 167330872 -83356982 - AluSx SINE Alu -181 131 1 200 203 68 17 chr2 167330875 167330934 -83356920 + MIR SINE MIR 183 244 -18 326 254 82 41 chr2 167331006 167331128 -83356726 - L2 LINE L2 0 3313 3187 181 392 51 25 chr2 167331137 167331295 -83356559 - L3b LINE CR1 -240 1343 1182 184 100 33 0 chr2 167331901 167331931 -83355923 - L2 LINE L2 -1 3271 3241 201 327 158 15 chr2 167332696 167332898 -83354956 + L2 LINE L2 2825 3055 -217 199 290 43 29 chr2 167333006 167333075 -83354779 + L2 LINE L2 3198 3267 -5 2509 64 0 6 chr2 167333279 167333592 -83354262 + AluY SINE Alu 1 311 0 2115 112 29 52 chr2 167334245 167334629 -83353225 - THE1C LTR MaLR 0 375 1 405 148 49 0 chr2 167336076 167336157 -83351697 + MER33 DNA MER1_type 1 85 -239 517 332 82 9 chr2 167336556 167336788 -83351066 + MIR SINE MIR 8 256 -6 1804 177 49 0 chr2 167337561 167337905 -83349949 + MER46B DNA MER2_type 1 236 0 2051 165 80 12 chr2 167338494 167338895 -83348959 - MSTA LTR MaLR 0 428 1 23 0 0 0 chr2 167339954 167339977 -83347877 + AT_rich Low_complexity Low_complexity 1 23 0 1870 100 0 8 chr2 167340788 167341039 -83346815 + AluSg SINE Alu 50 298 -12 22 0 0 0 chr2 167342126 167342148 -83345706 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 167342403 167342432 -83345422 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr2 167345124 167345151 -83342703 + AT_rich Low_complexity Low_complexity 1 27 0 190 261 261 0 chr2 167347099 167347168 -83340686 - L2 LINE L2 0 3313 3227 180 111 0 0 chr2 167348195 167348222 -83339632 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 25 51 0 0 chr2 167348997 167349036 -83338818 + AT_rich Low_complexity Low_complexity 1 39 0 26 50 0 0 chr2 167350107 167350147 -83337707 + AT_rich Low_complexity Low_complexity 1 40 0 324 127 25 25 chr2 167350352 167350431 -83337423 + (TCTA)n Simple_repeat Simple_repeat 1 79 0 225 316 60 34 chr2 167351259 167351376 -83336478 + L2 LINE L2 3185 3304 -9 375 269 101 57 chr2 167351396 167351482 -83336372 + L1ME4a LINE L1 5676 5757 -364 1871 113 67 14 chr2 167351482 167351765 -83336089 + AluSx SINE Alu 1 298 -14 375 269 101 57 chr2 167351765 167351905 -83335949 + L1ME4a LINE L1 5757 5912 -209 22 0 0 0 chr2 167352045 167352067 -83335787 + AT_rich Low_complexity Low_complexity 1 22 0 1872 204 112 86 chr2 167352730 167353535 -83334319 - LTR1B LTR ERV1 0 826 1 204 333 21 21 chr2 167353544 167353640 -83334214 + L2 LINE L2 3195 3290 -23 1663 162 14 11 chr2 167353956 167354260 -83333594 - AluSx SINE Alu 0 305 1 246 289 13 40 chr2 167355344 167355420 -83332434 + L2 LINE L2 3219 3292 -21 225 247 71 0 chr2 167356049 167356134 -83331720 + L1ME4a LINE L1 5979 6069 -52 184 347 99 47 chr2 167356594 167356937 -83330917 - L2 LINE L2 -355 2959 2599 275 323 0 10 chr2 167357036 167357132 -83330722 - L3b LINE CR1 -202 1381 1287 22 35 0 0 chr2 167357384 167357413 -83330441 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 167357496 167357518 -83330336 + AT_rich Low_complexity Low_complexity 1 22 0 606 252 103 7 chr2 167358021 167358176 -83329678 + MER5A DNA MER1_type 20 189 0 2181 142 18 0 chr2 167360062 167360400 -83327454 + L1MA8 LINE L1 5433 5776 -515 216 0 0 0 chr2 167360400 167360424 -83327430 + (TG)n Simple_repeat Simple_repeat 2 25 0 201 237 0 0 chr2 167360426 167360485 -83327369 + (TA)n Simple_repeat Simple_repeat 1 59 0 252 247 68 0 chr2 167360488 167360561 -83327293 + L1MC4 LINE L1 6615 6692 -1350 195 42 0 0 chr2 167360846 167360870 -83326984 + (CA)n Simple_repeat Simple_repeat 2 25 0 2556 137 43 8 chr2 167360875 167361364 -83326490 + L1MA8 LINE L1 5782 6287 -4 195 42 0 0 chr2 167361731 167361755 -83326099 + (TG)n Simple_repeat Simple_repeat 2 25 0 271 268 159 7 chr2 167363475 167363613 -83324241 - MIR SINE MIR 0 262 104 999 283 91 45 chr2 167363821 167364405 -83323449 + L1ME3A LINE L1 5344 5954 -208 278 289 155 37 chr2 167364467 167364654 -83323200 + L1ME3A LINE L1 5962 6170 0 322 247 52 21 chr2 167364733 167364830 -83323024 + MER112 DNA MER1_type 140 239 -21 513 187 53 29 chr2 167365116 167365250 -83322604 - MIR SINE MIR -21 241 105 21 104 0 0 chr2 167366389 167366466 -83321388 + AT_rich Low_complexity Low_complexity 1 77 0 218 408 130 7 chr2 167368381 167368827 -83319027 - L2 LINE L2 -418 2896 2396 614 249 34 15 chr2 167370494 167370699 -83317155 - L1MD3 LINE L1 -19 7976 7768 2258 108 0 7 chr2 167371175 167371480 -83316374 + AluSg SINE Alu 1 303 -7 222 308 77 22 chr2 167371481 167371572 -83316282 + MIR SINE MIR 19 114 -94 355 313 57 88 chr2 167372882 167373068 -83314786 + MIR SINE MIR 46 252 -10 195 306 0 20 chr2 167373124 167373173 -83314681 - MIR SINE MIR -194 68 21 261 211 0 0 chr2 167375585 167375642 -83312212 + (TA)n Simple_repeat Simple_repeat 1 57 0 221 191 0 21 chr2 167377020 167377067 -83310787 + T-rich Low_complexity Low_complexity 1 46 0 376 273 27 96 chr2 167377688 167377875 -83309979 + MER5B DNA MER1_type 2 175 -3 306 293 0 38 chr2 167378443 167378549 -83309305 + G-rich Low_complexity Low_complexity 4 105 0 1696 178 0 41 chr2 167378676 167379007 -83308847 - AluJo SINE Alu 0 322 4 192 158 0 0 chr2 167379684 167379722 -83308132 + CT-rich Low_complexity Low_complexity 4 41 0 338 272 68 27 chr2 167380022 167380169 -83307685 - L1MEc LINE L1 -4640 1756 1604 341 148 49 0 chr2 167380182 167380324 -83307530 + (TA)n Simple_repeat Simple_repeat 2 150 0 44 35 0 0 chr2 167380324 167380382 -83307472 + AT_rich Low_complexity Low_complexity 1 58 0 352 269 56 62 chr2 167380474 167380634 -83307220 - L1MEc LINE L1 -4916 1289 1131 1127 255 85 22 chr2 167380639 167381145 -83306709 - L1M4 LINE L1 -2471 3675 3138 * 2209 284 93 36 chr2 167381131 167382976 -83304878 - L1MEc LINE L1 -1951 4264 2315 306 0 0 0 chr2 167383037 167383071 -83304783 + (CA)n Simple_repeat Simple_repeat 1 34 0 1690 102 81 73 chr2 167383363 167383431 -83304423 - THE1C LTR MaLR 0 375 309 1957 151 7 0 chr2 167383431 167383735 -83304119 - AluSq SINE Alu -7 306 1 1690 102 81 73 chr2 167383735 167384038 -83303816 - THE1C LTR MaLR -66 309 1 294 309 62 21 chr2 167384099 167384293 -83303561 - L1MEc LINE L1 -4653 1743 1542 390 221 0 18 chr2 167384317 167384430 -83303424 - LTR37A LTR ERV1 -27 399 289 2352 198 63 18 chr2 167385556 167385931 -83301923 + L1MB5 LINE L1 5579 5989 -185 1654 187 30 3 chr2 167385931 167386230 -83301624 + AluJb SINE Alu 1 307 -5 2352 198 63 18 chr2 167386230 167386411 -83301443 + L1MB5 LINE L1 5989 6160 -14 992 241 109 18 chr2 167387714 167388217 -83299637 - MLT1E1 LTR MaLR -2 591 55 369 0 0 0 chr2 167388732 167388773 -83299081 + (CA)n Simple_repeat Simple_repeat 2 42 0 226 275 62 25 chr2 167389680 167389760 -83298094 + L2 LINE L2 3174 3256 -16 29 90 0 0 chr2 167392034 167392112 -83295742 + AT_rich Low_complexity Low_complexity 1 78 0 486 264 148 11 chr2 167392129 167392311 -83295543 - MIR SINE MIR -34 228 22 1427 182 0 26 chr2 167392810 167393074 -83294780 + AluJb SINE Alu 11 267 -45 1962 122 7 0 chr2 167394075 167394353 -83293501 + THE1-int LTR MaLR 940 1219 -361 899 104 37 15 chr2 167394353 167394487 -83293367 + THE1B LTR MaLR 5 141 -223 1127 167 11 53 chr2 167394498 167394761 -83293093 + THE1B LTR MaLR 113 364 0 1433 139 0 9 chr2 167394761 167394977 -83292877 + AluSg/x SINE Alu 97 310 0 378 121 0 0 chr2 167395670 167395736 -83292118 + (TC)n Simple_repeat Simple_repeat 2 67 0 2910 0 0 0 chr2 167395999 167396310 -83291544 + AluYa5 SINE Alu 1 311 0 30 27 0 0 chr2 167396503 167396540 -83291314 + AT_rich Low_complexity Low_complexity 1 37 0 267 213 50 62 chr2 167398167 167398247 -83289607 - MER68 LTR ERV1 0 562 484 * 759 233 40 67 chr2 167398246 167398469 -83289385 - MER68 LTR ERV1 -345 217 1 23 0 0 0 chr2 167398498 167398521 -83289333 + AT_rich Low_complexity Low_complexity 1 23 0 419 35 18 0 chr2 167398582 167398639 -83289215 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 185 83 28 0 chr2 167398788 167398824 -83289030 + (TAAAAA)n Simple_repeat Simple_repeat 4 40 0 2240 126 14 0 chr2 167398848 167399197 -83288657 - L1PB1 LINE L1 -5 6862 6509 195 42 0 0 chr2 167399197 167399221 -83288633 + (TG)n Simple_repeat Simple_repeat 2 25 0 198 191 0 0 chr2 167399223 167399265 -83288589 + (CA)n Simple_repeat Simple_repeat 2 43 0 482 170 75 0 chr2 167399328 167399422 -83288432 + MER68 LTR ERV1 117 217 -345 5417 176 7 18 chr2 167399455 167401131 -83286723 - L1PB1 LINE L1 -360 6507 4854 * 6878 149 11 9 chr2 167401122 167402277 -83285577 - L1PB1 LINE L1 -4682 2181 1025 3586 144 35 39 chr2 167402278 167402972 -83284882 - L1PB1 LINE L1 -6170 693 3 271 250 80 23 chr2 167403987 167404075 -83283779 - MER81 DNA DNA 0 114 22 294 257 81 22 chr2 167404167 167404303 -83283551 - L1ME LINE L1 -443 5678 5535 22 35 0 0 chr2 167404690 167404719 -83283135 + AT_rich Low_complexity Low_complexity 1 29 0 1874 156 3 3 chr2 167404781 167405069 -83282785 - AluSx SINE Alu -24 288 1 867 287 16 10 chr2 167405178 167405481 -83282373 + L1MC4a LINE L1 5545 5849 -1959 25 31 0 0 chr2 167406046 167406078 -83281776 + AT_rich Low_complexity Low_complexity 1 32 0 342 215 161 54 chr2 167406731 167406868 -83280986 + Charlie7 DNA MER1_type 390 511 -2101 2490 138 14 28 chr2 167406868 167407302 -83280552 - MSTA LTR MaLR 0 428 1 9192 173 18 9 chr2 167407302 167408939 -83278915 - MSTA-int LTR MaLR 0 1651 1 2383 153 14 34 chr2 167408939 167409376 -83278478 - MSTA LTR MaLR 0 428 1 342 215 161 54 chr2 167409376 167409422 -83278432 + Charlie7 DNA MER1_type 510 595 -2017 314 294 55 3 chr2 167410693 167410813 -83277041 + MER21B LTR ERV1 24 196 -409 998 279 63 83 chr2 167410843 167411398 -83276456 + MER21B LTR ERV1 141 684 -179 918 222 22 0 chr2 167411469 167411654 -83276200 + MER5A DNA MER1_type 1 189 0 467 228 291 39 chr2 167411680 167411886 -83275968 + MER52A LTR ERV1 1 258 -1497 * 6339 183 127 11 chr2 167411860 167413103 -83274751 + MER52A LTR ERV1 368 1755 0 4872 179 55 24 chr2 167413206 167414315 -83273539 - Charlie1a DNA MER1_type 0 1455 313 4374 25 0 0 chr2 167414329 167414947 -83272907 - L1PA3 LINE L1 -665 5490 4873 5757 17 0 0 chr2 167414948 167415601 -83272253 + L1PA3 LINE L1 5503 6155 0 1444 214 0 19 chr2 167415621 167415887 -83271967 - AluJo SINE Alu -30 282 22 410 123 0 0 chr2 167415918 167415983 -83271871 - L1PA8 LINE L1 -9 6163 6099 533 94 12 0 chr2 167416003 167416088 -83271766 + (TC)n Simple_repeat Simple_repeat 1 86 0 1140 212 12 24 chr2 167416088 167416338 -83271516 - Charlie1a DNA MER1_type -1208 247 1 228 358 67 8 chr2 167416356 167416490 -83271364 + L2 LINE L2 3172 3313 0 308 352 86 52 chr2 167417089 167417416 -83270438 + L2 LINE L2 2924 3261 -11 215 223 213 64 chr2 167417769 167417863 -83269991 + MER5A DNA MER1_type 9 116 -73 1729 153 141 6 chr2 167418551 167418878 -83268976 + MSTA LTR MaLR 58 428 0 216 0 0 0 chr2 167418969 167418993 -83268861 + (TTG)n Simple_repeat Simple_repeat 2 25 0 865 140 7 0 chr2 167419008 167419144 -83268710 - MER72 LTR ERV1 0 722 586 15691 148 48 58 chr2 167419144 167422385 -83265469 - MER4B-int LTR ERV1 -706 6052 2729 1248 181 60 91 chr2 167422352 167422423 -83265431 - MER4B-int LTR ERV1 -3538 1585 1513 * 2293 67 0 7 chr2 167422423 167422734 -83265120 - AluY SINE Alu 0 309 1 1248 181 60 91 chr2 167422734 167423178 -83264676 - MER4B-int LTR ERV1 -3610 1513 1190 497 167 98 10 chr2 167423376 167423478 -83264376 - MLT1A2 LTR MaLR -5 369 259 1883 158 3 22 chr2 167423478 167423795 -83264059 + AluSx SINE Alu 1 311 -1 822 209 231 0 chr2 167423835 167424108 -83263746 - Charlie7 DNA MER1_type -513 2099 1764 657 259 122 46 chr2 167424099 167424427 -83263427 - Charlie7 DNA MER1_type -2036 576 224 * 240 216 21 31 chr2 167424456 167424553 -83263301 - Charlie7 DNA MER1_type -2474 138 43 199 325 87 32 chr2 167424587 167424713 -83263141 + MER5A DNA MER1_type 44 176 -13 313 308 77 44 chr2 167424731 167424913 -83262941 + MER5A DNA MER1_type 2 189 0 613 169 186 0 chr2 167425027 167425151 -83262703 + MER5A DNA MER1_type 3 149 -40 1767 164 3 14 chr2 167426218 167426505 -83261349 + AluJo SINE Alu 6 289 -23 469 152 0 25 chr2 167426505 167426584 -83261270 + FLAM SINE Alu 51 127 -16 29 0 0 0 chr2 167426584 167426613 -83261241 + AT_rich Low_complexity Low_complexity 1 29 0 184 146 21 21 chr2 167427481 167427529 -83260325 + (TA)n Simple_repeat Simple_repeat 2 49 0 917 119 0 8 chr2 167427663 167427789 -83260065 + FLAM_C SINE Alu 3 127 -16 28 29 0 0 chr2 167427791 167427826 -83260028 + AT_rich Low_complexity Low_complexity 1 35 0 713 245 86 26 chr2 167428232 167428465 -83259389 - Charlie8 DNA MER1_type -2160 257 11 220 286 43 29 chr2 167428477 167428547 -83259307 - MIR3 SINE MIR -51 157 87 13546 135 43 22 chr2 167429103 167431470 -83256384 + Tigger1 DNA MER2_type 2 2418 0 210 364 26 0 chr2 167431717 167431794 -83256060 - MER5B DNA MER1_type -31 147 69 234 222 0 0 chr2 167433199 167433253 -83254601 + MER103 DNA DNA 19 72 -94 316 275 158 23 chr2 167433409 167433580 -83254274 + MIR SINE MIR 25 218 -44 443 295 57 15 chr2 167433770 167434016 -83253838 - L1MC/D LINE L1 -356 5765 5547 315 0 0 0 chr2 167435683 167435718 -83252136 + (CA)n Simple_repeat Simple_repeat 2 36 0 345 257 83 9 chr2 167436307 167436416 -83251438 + MIR SINE MIR 96 212 -50 545 158 9 9 chr2 167437368 167437482 -83250372 + CT-rich Low_complexity Low_complexity 3 116 0 25 0 0 0 chr2 167437861 167437886 -83249968 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 167439295 167439317 -83248537 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 167441121 167441151 -83246703 + AT_rich Low_complexity Low_complexity 1 30 0 381 314 68 28 chr2 167441445 167441799 -83246055 + L1MEd LINE L1 976 1343 -4862 23 0 0 0 chr2 167441807 167441830 -83246024 + AT_rich Low_complexity Low_complexity 1 23 0 317 314 51 7 chr2 167441847 167441984 -83245870 + L1MEd LINE L1 1633 1775 -4621 1675 187 0 0 chr2 167442262 167442529 -83245325 + AluJb SINE Alu 1 267 -45 245 192 0 0 chr2 167442569 167442621 -83245233 + A-rich Low_complexity Low_complexity 1 52 0 423 282 26 39 chr2 167442685 167442841 -83245013 + L1MC5 LINE L1 5483 5636 -2172 * 687 233 163 60 chr2 167442833 167443433 -83244421 + L1MC5 LINE L1 7005 7666 -295 5001 169 29 24 chr2 167443456 167445166 -83242688 - L1PA16 LINE L1 -7 6159 4459 186 358 28 18 chr2 167445387 167445496 -83242358 - MER5A DNA MER1_type -44 145 36 25 51 0 0 chr2 167445536 167445575 -83242279 + AT_rich Low_complexity Low_complexity 1 39 0 640 183 51 15 chr2 167445998 167446135 -83241719 - FLAM_C SINE Alu -1 142 1 24 32 0 0 chr2 167446189 167446220 -83241634 + AT_rich Low_complexity Low_complexity 1 31 0 1954 142 10 0 chr2 167446410 167446699 -83241155 - AluSx SINE Alu -20 292 1 22 35 0 0 chr2 167447201 167447230 -83240624 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 167447267 167447289 -83240565 + AT_rich Low_complexity Low_complexity 1 22 0 448 271 0 0 chr2 167449148 167449255 -83238599 + FLAM_A SINE Alu 18 124 -18 23 0 0 0 chr2 167449507 167449530 -83238324 + AT_rich Low_complexity Low_complexity 1 23 0 437 259 69 0 chr2 167449530 167449646 -83238208 + L2 LINE L2 3182 3305 -8 250 295 134 69 chr2 167450117 167450334 -83237520 + Charlie8 DNA MER1_type 181 411 -2006 188 83 0 28 chr2 167452725 167452761 -83235093 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 26 0 0 0 chr2 167454134 167454160 -83233694 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr2 167454299 167454329 -83233525 + AT_rich Low_complexity Low_complexity 1 30 0 31 44 0 0 chr2 167455947 167455992 -83231862 + AT_rich Low_complexity Low_complexity 1 45 0 781 233 6 17 chr2 167455992 167456168 -83231686 - FAM SINE Alu -1 174 1 210 231 0 0 chr2 167456326 167456365 -83231489 - MIR SINE MIR -116 146 108 253 330 119 9 chr2 167457296 167457405 -83230449 + L2 LINE L2 3150 3270 -2 214 359 13 0 chr2 167457418 167457496 -83230358 - L3 LINE CR1 -91 1486 1408 22 35 0 0 chr2 167458812 167458841 -83229013 + AT_rich Low_complexity Low_complexity 1 29 0 267 276 60 22 chr2 167459213 167459347 -83228507 + L2 LINE L2 1793 1931 -1383 345 210 280 21 chr2 167459350 167459493 -83228361 - MER5A DNA MER1_type 0 189 10 204 341 48 36 chr2 167459527 167459694 -83228160 + L2 LINE L2 1991 2159 -1155 465 302 8 16 chr2 167459703 167459832 -83228022 - MER5A DNA MER1_type -3 186 59 22 35 0 0 chr2 167459852 167459881 -83227973 + AT_rich Low_complexity Low_complexity 1 29 0 3704 191 34 23 chr2 167459945 167460972 -83226882 - L1MA9 LINE L1 -60 6252 5254 227 344 143 22 chr2 167460973 167461197 -83226657 + L2 LINE L2 2176 2426 -888 392 257 95 47 chr2 167461263 167461411 -83226443 - MER5A DNA MER1_type -9 180 26 350 349 120 47 chr2 167462662 167463412 -83224442 + L2 LINE L2 1277 2081 -1233 264 216 36 16 chr2 167463431 167463513 -83224341 - Charlie8 DNA MER1_type -7 2410 240 40 37 0 0 chr2 167464029 167464083 -83223771 + AT_rich Low_complexity Low_complexity 1 54 0 2974 229 57 26 chr2 167464183 167465189 -83222665 - L1ME1 LINE L1 -18 6148 5074 2092 131 3 6 chr2 167465189 167465502 -83222352 - AluSx SINE Alu 0 312 1 2974 229 57 26 chr2 167465502 167466001 -83221853 - L1ME1 LINE L1 -1092 5074 4592 221 290 75 36 chr2 167466296 167466479 -83221375 + MIR SINE MIR 1 261 -1 706 292 37 20 chr2 167466483 167466903 -83220951 + L1ME4a LINE L1 5489 5914 -207 2320 98 3 0 chr2 167466915 167467220 -83220634 - AluY SINE Alu -5 306 1 777 163 8 0 chr2 167467495 167467624 -83220230 - MLT1A1 LTR MaLR 0 365 236 42952 31 21 1 chr2 167468416 167474417 -83213437 + L1PA2 LINE L1 4 6127 -28 466 286 101 35 chr2 167474834 167475052 -83212802 + MIR SINE MIR 3 238 -24 2150 106 10 0 chr2 167475529 167475659 -83212195 + AluSx SINE Alu 1 128 -184 310 56 19 19 chr2 167475659 167475713 -83212141 + (TA)n Simple_repeat Simple_repeat 2 55 0 2150 106 10 0 chr2 167475713 167475874 -83211980 + AluSx SINE Alu 128 295 -17 1736 188 7 0 chr2 167475887 167476265 -83211589 + AluSx SINE Alu 1 380 0 406 365 66 8 chr2 167476900 167477144 -83210710 + MIR SINE MIR 4 261 -1 595 269 48 27 chr2 167477537 167477723 -83210131 + MIR SINE MIR 14 203 -59 1997 211 57 61 chr2 167477723 167477828 -83210026 - MLT1E3 LTR MaLR 0 624 520 1577 156 11 4 chr2 167477828 167478091 -83209763 + AluJo SINE Alu 34 298 -14 1997 211 57 61 chr2 167478091 167478655 -83209199 - MLT1E3 LTR MaLR -104 520 1 304 210 16 0 chr2 167478656 167478718 -83209136 + MIR SINE MIR 200 262 0 328 233 216 26 chr2 167478822 167478938 -83208916 + L1ME LINE L1 5541 5678 -443 303 104 78 0 chr2 167478939 167479054 -83208800 + (TA)n Simple_repeat Simple_repeat 1 124 0 803 169 0 40 chr2 167479059 167479207 -83208647 + FLAM_C SINE Alu 1 142 -1 244 230 53 115 chr2 167479228 167479437 -83208417 + L1ME LINE L1 5712 5907 -214 1620 181 10 0 chr2 167479987 167480291 -83207563 + L1PA16 LINE L1 5858 6164 -2 374 213 40 0 chr2 167480295 167480370 -83207484 - MIR SINE MIR -95 167 90 2006 138 0 3 chr2 167480458 167480755 -83207099 - AluSx SINE Alu -14 298 3 269 216 11 0 chr2 167481210 167481298 -83206556 + (TA)n Simple_repeat Simple_repeat 1 89 0 1500 168 78 56 chr2 167481772 167482129 -83205725 - MLT1A1 LTR MaLR 0 365 1 1666 130 67 11 chr2 167482295 167482564 -83205290 - AluSx SINE Alu -7 305 22 672 99 0 30 chr2 167484071 167484172 -83203682 + L1PA6 LINE L1 6051 6148 -6 243 310 47 31 chr2 167484519 167484648 -83203206 + L2 LINE L2 3142 3272 0 458 282 26 56 chr2 167485811 167486006 -83201848 - MIR3 SINE MIR -11 197 9 285 146 0 0 chr2 167488495 167488543 -83199311 + (TA)n Simple_repeat Simple_repeat 2 49 0 228 152 0 0 chr2 167488547 167488593 -83199261 - LTR66 LTR ERVL -171 439 394 180 0 0 0 chr2 167488610 167488630 -83199224 + (TA)n Simple_repeat Simple_repeat 1 20 0 2104 102 0 27 chr2 167488630 167488924 -83198930 - AluSx SINE Alu -26 286 1 302 229 0 14 chr2 167489734 167489804 -83198050 - MIR SINE MIR -15 247 179 241 259 222 15 chr2 167490687 167490822 -83197032 - L1ME LINE L1 -466 5655 5493 243 125 0 0 chr2 167490903 167490943 -83196911 + (TC)n Simple_repeat Simple_repeat 2 41 0 240 220 0 17 chr2 167490947 167491006 -83196848 + (CATA)n Simple_repeat Simple_repeat 2 59 0 210 71 0 0 chr2 167491098 167491126 -83196728 + (TG)n Simple_repeat Simple_repeat 1 28 0 318 236 208 54 chr2 167491392 167491633 -83196221 - L1 LINE L1 -1133 5013 4736 518 262 24 97 chr2 167492466 167492672 -83195182 - MIR SINE MIR -71 191 1 27 0 0 0 chr2 167493857 167493884 -83193970 + AT_rich Low_complexity Low_complexity 1 27 0 388 281 57 31 chr2 167494068 167494260 -83193594 - MLT1K LTR MaLR 0 588 392 566 466 50 22 chr2 167494463 167494926 -83192928 + LTR33A LTR ERVL 46 521 -2 189 241 172 0 chr2 167495398 167495456 -83192398 - MIR SINE MIR -114 148 81 426 290 59 106 chr2 167496633 167497211 -83190643 - L1MC4a LINE L1 -204 5917 5506 589 268 86 26 chr2 167497244 167497707 -83190147 - L2 LINE L2 -86 3227 2469 3317 255 28 17 chr2 167497726 167498739 -83189115 - L1MC3 LINE L1 -1 7784 6761 3341 299 53 27 chr2 167498864 167500227 -83187627 - L2 LINE L2 -962 2352 955 2183 88 0 10 chr2 167500958 167501255 -83186599 + AluSc SINE Alu 1 294 -15 282 73 0 0 chr2 167502840 167502881 -83184973 + (TCC)n Simple_repeat Simple_repeat 3 43 0 455 211 0 11 chr2 167502896 167502986 -83184868 - FLAM_A SINE Alu -52 90 2 1898 93 11 25 chr2 167503173 167503451 -83184403 + AluSg SINE Alu 1 274 -36 2098 143 0 0 chr2 167503815 167504123 -83183731 - AluSx SINE Alu -4 308 1 764 227 39 5 chr2 167504405 167504612 -83183242 + L1MA8 LINE L1 6068 6281 -10 23 54 0 0 chr2 167505378 167505415 -83182439 + AT_rich Low_complexity Low_complexity 1 37 0 194 277 0 0 chr2 167506824 167506871 -83180983 - MIR SINE MIR -12 250 204 619 269 14 33 chr2 167507660 167507872 -83179982 - L2 LINE L2 -6 3307 3100 189 0 0 0 chr2 167508708 167508729 -83179125 + (TCTA)n Simple_repeat Simple_repeat 2 22 0 642 83 25 0 chr2 167508732 167508852 -83179002 + (TA)n Simple_repeat Simple_repeat 2 124 0 1141 180 24 24 chr2 167508852 167509063 -83178791 - AluJb SINE Alu -17 295 85 917 209 52 38 chr2 167509700 167509910 -83177944 - MER20 DNA MER1_type 0 219 7 1741 159 0 31 chr2 167510028 167510342 -83177512 + AluJb SINE Alu 1 305 0 417 137 21 11 chr2 167510603 167510698 -83177156 + GA-rich Low_complexity Low_complexity 2 97 0 2724 205 27 18 chr2 167510797 167511460 -83176394 - L1 LINE L1 -755 5391 4723 1649 195 16 24 chr2 167511460 167511829 -83176025 + MER52A LTR ERV1 1 366 -1389 297 167 0 0 chr2 167511829 167511877 -83175977 + L1P4 LINE L1 5423 5470 -695 * 612 45 11 11 chr2 167511869 167511958 -83175896 + THE1A-int LTR MaLR 1492 1580 0 1537 156 101 15 chr2 167511958 167512285 -83175569 + THE1A LTR MaLR 1 355 0 181 346 167 0 chr2 167512411 167512489 -83175365 + L2 LINE L2 3147 3237 -35 1082 42 0 28 chr2 167514183 167514325 -83173529 - L1PA4 LINE L1 -229 5926 5789 * 11657 24 0 0 chr2 167514324 167515716 -83172138 + L1P LINE L1 3051 4442 -1704 236 338 14 0 chr2 167516876 167516947 -83170907 + Charlie8 DNA MER1_type 1 72 -2345 506 304 111 26 chr2 167517093 167517445 -83170409 + L1MC4a LINE L1 5506 5887 -1921 23 68 0 0 chr2 167517483 167517527 -83170327 + AT_rich Low_complexity Low_complexity 1 44 0 203 184 82 20 chr2 167520572 167520621 -83167233 - L2 LINE L2 0 3313 3262 24 0 0 0 chr2 167520954 167520978 -83166876 + AT_rich Low_complexity Low_complexity 1 24 0 229 281 0 0 chr2 167525095 167525152 -83162702 + (TATG)n Simple_repeat Simple_repeat 3 59 0 537 270 158 7 chr2 167525186 167525464 -83162390 - L1ME4a LINE L1 -227 5894 5575 24 85 0 0 chr2 167525959 167526018 -83161836 + AT_rich Low_complexity Low_complexity 1 59 0 692 151 0 72 chr2 167526363 167526515 -83161339 - L1MA1 LINE L1 0 6302 6162 419 253 49 19 chr2 167526529 167526691 -83161163 - L2 LINE L2 -1 3312 3146 21 0 0 0 chr2 167526694 167526715 -83161139 + AT_rich Low_complexity Low_complexity 1 21 0 3184 277 157 14 chr2 167526756 167528175 -83159679 - L2 LINE L2 -140 3173 1545 333 290 20 30 chr2 167528327 167528427 -83159427 + L2 LINE L2 3205 3303 -10 21 82 0 0 chr2 167528477 167528526 -83159328 + AT_rich Low_complexity Low_complexity 1 49 0 422 275 38 8 chr2 167528720 167528851 -83159003 - MIR SINE MIR -108 154 20 2101 92 4 7 chr2 167528890 167529194 -83158660 - AluSg SINE Alu 0 303 1 670 274 103 42 chr2 167529853 167530366 -83157488 - L1MC4a LINE L1 -850 5447 5278 403 295 79 0 chr2 167530958 167531107 -83156747 + MIR SINE MIR 30 190 -63 266 281 70 9 chr2 167535177 167535291 -83152563 - MIR SINE MIR 0 262 142 4750 259 152 46 chr2 167535296 167535398 -83152456 + L2 LINE L2 580 670 -2643 2048 124 23 0 chr2 167535398 167535697 -83152157 - AluSx SINE Alu -6 306 1 4750 259 152 46 chr2 167535697 167538073 -83149781 + L2 LINE L2 670 3313 0 251 313 91 0 chr2 167538081 167538180 -83149674 - MIR SINE MIR -120 142 35 214 358 37 0 chr2 167538439 167538520 -83149334 - L2 LINE L2 -253 3019 2936 531 321 91 49 chr2 167538775 167539323 -83148531 - L2 LINE L2 -718 2596 2026 1336 220 35 49 chr2 167539765 167540111 -83147743 + MER58B DNA MER1_type 1 341 0 233 229 73 62 chr2 167540379 167540475 -83147379 + L2 LINE L2 3168 3264 -8 183 42 0 0 chr2 167541777 167541801 -83146053 + (GA)n Simple_repeat Simple_repeat 1 24 0 25 51 0 0 chr2 167542202 167542241 -83145613 + AT_rich Low_complexity Low_complexity 1 39 0 2451 70 0 0 chr2 167542492 167542790 -83145064 - AluY SINE Alu -1 310 13 2716 101 57 19 chr2 167545869 167546287 -83141567 + MER57B LTR ERV1 1 434 0 258 364 53 0 chr2 167548970 167549102 -83138752 + L2 LINE L2 2920 3058 -214 503 243 81 27 chr2 167549171 167549319 -83138535 + MIR SINE MIR 107 262 0 351 206 27 41 chr2 167549329 167549402 -83138452 - AluJo SINE Alu -145 157 86 183 167 0 0 chr2 167549571 167549613 -83138241 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 180 111 0 0 chr2 167550340 167550367 -83137487 + (TG)n Simple_repeat Simple_repeat 2 28 0 1031 303 8 4 chr2 167551209 167551473 -83136381 - MLT1H1 LTR MaLR -275 280 16 27 29 0 0 chr2 167551473 167551507 -83136347 + AT_rich Low_complexity Low_complexity 1 34 0 25 31 0 0 chr2 167551574 167551606 -83136248 + AT_rich Low_complexity Low_complexity 1 32 0 345 277 89 18 chr2 167551751 167551863 -83135991 + L2 LINE L2 3153 3272 0 32 26 0 0 chr2 167554129 167554168 -83133686 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr2 167554352 167554373 -83133481 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr2 167555752 167555786 -83132068 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 167555931 167555952 -83131902 + AT_rich Low_complexity Low_complexity 1 21 0 224 239 33 0 chr2 167558747 167558932 -83128922 + (TA)n Simple_repeat Simple_repeat 1 191 0 22 56 0 0 chr2 167558983 167559019 -83128835 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 167559935 167559958 -83127896 + AT_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr2 167560015 167560064 -83127790 + AT_rich Low_complexity Low_complexity 1 49 0 33 85 0 0 chr2 167560371 167560453 -83127401 + AT_rich Low_complexity Low_complexity 1 82 0 284 232 14 0 chr2 167561307 167561376 -83126478 - MER103 DNA DNA -65 101 32 408 320 131 0 chr2 167561585 167561760 -83126094 + MIR SINE MIR 65 262 0 219 244 0 0 chr2 167562277 167562322 -83125532 + L2 LINE L2 3225 3269 -3 2143 62 0 0 chr2 167562625 167562883 -83124971 - AluY SINE Alu -5 306 49 2243 100 0 0 chr2 167564251 167564540 -83123314 - AluSx SINE Alu -23 289 1 271 375 10 10 chr2 167564540 167564644 -83123210 - MIR SINE MIR -60 148 45 256 207 262 62 chr2 167564869 167565014 -83122840 + MIR SINE MIR 88 261 -1 360 297 181 0 chr2 167566212 167566350 -83121504 + MIR SINE MIR 73 235 -27 3311 118 59 2 chr2 167566535 167567059 -83120795 - MER41C LTR ERV1 0 554 1 1481 104 45 5 chr2 167567494 167567715 -83120139 + MER30 DNA MER1_type 1 230 0 284 185 141 65 chr2 167569108 167569200 -83118654 + MER53 DNA DNA 2 100 -89 * 545 106 333 0 chr2 167569147 167569270 -83118584 - MER53 DNA DNA -25 164 1 227 407 47 0 chr2 167570527 167570613 -83117241 - L2 LINE L2 -42 3230 3141 516 242 48 66 chr2 167570646 167570873 -83116981 - L2 LINE L2 0 3313 3091 * 849 377 32 0 chr2 167570858 167571229 -83116625 - L2 LINE L2 -356 2958 2576 1593 174 13 22 chr2 167571375 167571686 -83116168 + AluJo SINE Alu 1 308 -4 2759 91 5 0 chr2 167573219 167573592 -83114262 + THE1C LTR MaLR 1 375 0 8937 113 49 63 chr2 167573592 167575195 -83112659 + THE1C-int LTR MaLR 1 1580 0 2325 110 21 32 chr2 167575197 167575499 -83112355 + THE1C LTR MaLR 5 304 -71 2748 10 0 0 chr2 167575499 167575803 -83112051 - AluYa5 SINE Alu -7 304 1 2325 110 21 32 chr2 167575803 167575873 -83111981 + THE1C LTR MaLR 304 373 -2 696 250 5 46 chr2 167576040 167576236 -83111618 - MER5A DNA MER1_type -1 188 1 1949 176 20 3 chr2 167576528 167576881 -83110973 + MER46B DNA MER2_type 2 235 -1 21 82 0 0 chr2 167577559 167577608 -83110246 + AT_rich Low_complexity Low_complexity 1 49 0 1854 137 43 0 chr2 167578509 167578666 -83109188 - AluSx SINE Alu -22 290 114 185 83 28 0 chr2 167578666 167578702 -83109152 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 1854 137 43 0 chr2 167578702 167578822 -83109032 - AluSx SINE Alu -198 114 1 201 94 0 0 chr2 167578826 167578858 -83108996 + (T)n Simple_repeat Simple_repeat 1 32 0 187 239 18 150 chr2 167579436 167579549 -83108305 + MIR SINE MIR 139 236 -26 441 284 117 0 chr2 167579562 167579724 -83108130 - MIR SINE MIR -1 261 81 28 48 0 0 chr2 167581126 167581168 -83106686 + AT_rich Low_complexity Low_complexity 1 42 0 1609 164 60 17 chr2 167581660 167582067 -83105787 + AluJb SINE Alu 1 420 0 980 188 0 6 chr2 167582119 167582289 -83105565 - AluJb SINE Alu -139 173 5 7096 27 0 0 chr2 167582635 167583463 -83104391 - L1PA3 LINE L1 0 6155 5328 305 138 0 17 chr2 167584343 167584401 -83103453 + (TTCC)n Simple_repeat Simple_repeat 1 57 0 2410 61 7 10 chr2 167585587 167585897 -83101957 - AluY SINE Alu -2 309 1 232 288 68 27 chr2 167586814 167586887 -83100967 - L2 LINE L2 -46 3226 3151 247 342 55 25 chr2 167587514 167587716 -83100138 - L3 LINE CR1 -706 871 664 * 351 302 223 32 chr2 167587683 167588118 -83099736 + L2 LINE L2 2531 3070 -243 275 243 188 45 chr2 167588130 167588332 -83099522 + L1MC5 LINE L1 7701 7931 -30 232 197 56 42 chr2 167588336 167588407 -83099447 + AluJ/FRAM SINE Alu 231 302 0 572 272 149 21 chr2 167588619 167589042 -83098812 + L1ME LINE L1 4803 5279 -867 312 327 77 36 chr2 167589083 167589331 -83098523 + L1ME LINE L1 5317 5574 -590 182 37 37 0 chr2 167590774 167590801 -83097053 + (TA)n Simple_repeat Simple_repeat 1 28 0 25 31 0 0 chr2 167591473 167591505 -83096349 + AT_rich Low_complexity Low_complexity 1 32 0 2353 58 0 55 chr2 167591511 167591823 -83096031 + AluY SINE Alu 1 295 -16 285 347 99 19 chr2 167591829 167591876 -83095978 + MIR SINE MIR 32 74 -188 2499 63 0 13 chr2 167591876 167592191 -83095663 + AluY SINE Alu 1 311 0 285 347 99 19 chr2 167592191 167592356 -83095498 + MIR SINE MIR 74 261 -1 245 351 22 37 chr2 167592805 167592939 -83094915 - MIR SINE MIR -130 132 1 359 148 6 225 chr2 167594002 167594171 -83093683 + L1MA8 LINE L1 6158 6289 -2 695 270 5 25 chr2 167594321 167594517 -83093337 - MIR SINE MIR -53 209 18 7307 159 25 24 chr2 167595106 167597452 -83090402 - L1MA5 LINE L1 -126 7236 4892 6060 208 77 40 chr2 167597436 167597965 -83089889 - L1MA5 LINE L1 -3178 4030 3522 * 2312 102 0 0 chr2 167597965 167598260 -83089594 + AluY SINE Alu 2 296 -15 6060 208 77 40 chr2 167598260 167598434 -83089420 - L1MA5 LINE L1 -3686 3522 3356 1367 174 80 67 chr2 167598434 167598733 -83089121 - AluJb SINE Alu -9 303 1 6060 208 77 40 chr2 167598733 167601120 -83086734 - L1MA5 LINE L1 -3852 3356 24 189 74 0 0 chr2 167602283 167602310 -83085544 + (CA)n Simple_repeat Simple_repeat 2 28 0 845 306 51 24 chr2 167605173 167605509 -83082345 - MLT1J LTR MaLR -53 458 114 1429 191 93 28 chr2 167605706 167605891 -83081963 - MER2 DNA MER2_type 0 345 173 1970 149 33 9 chr2 167605891 167606220 -83081634 + MER1B DNA MER1_type 1 337 0 1429 191 93 28 chr2 167606220 167606358 -83081496 - MER2 DNA MER2_type -172 173 1 37 62 0 0 chr2 167606865 167606930 -83080924 + AT_rich Low_complexity Low_complexity 1 65 0 312 263 179 6 chr2 167607509 167607665 -83080189 - MIR SINE MIR -43 219 37 259 216 153 12 chr2 167607754 167607855 -83079999 + MIR SINE MIR 34 145 -63 807 305 106 8 chr2 167607867 167608048 -83079806 - L2 LINE L2 -1 3312 3150 2032 129 10 26 chr2 167608048 167608359 -83079495 + AluSx SINE Alu 2 307 -5 807 305 106 8 chr2 167608359 167608371 -83079483 - L2 LINE L2 -163 3150 3141 1786 100 140 0 chr2 167608371 167608642 -83079212 + AluSq SINE Alu 1 309 -4 2250 118 3 0 chr2 167608645 167608951 -83078903 + AluSq SINE Alu 3 309 -4 807 305 106 8 chr2 167608951 167609109 -83078745 - L2 LINE L2 -173 3140 2921 225 283 50 20 chr2 167610517 167610616 -83077238 - MIR SINE MIR -112 150 49 185 262 24 0 chr2 167611101 167611143 -83076711 + MER5A DNA MER1_type 2 44 -145 2321 91 0 0 chr2 167611144 167611440 -83076414 + AluSq SINE Alu 1 296 -17 911 116 7 34 chr2 167611487 167611634 -83076220 + FLAM_C SINE Alu 1 143 0 249 241 0 37 chr2 167611634 167611688 -83076166 + MER5A DNA MER1_type 107 158 -31 477 196 165 0 chr2 167611746 167611843 -83076011 - MER63 DNA MER1_type -97 739 1 183 189 0 0 chr2 167613560 167613597 -83074257 - L2 LINE L2 -1 3312 3276 1036 225 19 5 chr2 167614422 167614631 -83073223 + MER58A DNA MER1_type 1 212 -12 1685 177 45 10 chr2 167614943 167615231 -83072623 + AluJo SINE Alu 2 299 -13 315 230 81 0 chr2 167616396 167616470 -83071384 + L2 LINE L2 3226 3305 -8 1840 157 3 7 chr2 167616765 167617058 -83070796 + AluJb SINE Alu 7 298 -14 500 353 71 14 chr2 167617086 167617381 -83070473 - L2 LINE L2 -7 3306 2995 199 282 114 30 chr2 167617557 167617688 -83070166 + L2 LINE L2 3123 3264 -8 207 218 73 0 chr2 167618941 167618996 -83068858 + L2 LINE L2 3255 3313 0 25 0 0 0 chr2 167619484 167619509 -83068345 + AT_rich Low_complexity Low_complexity 1 25 0 493 266 94 70 chr2 167620659 167620882 -83066972 - L1ME4a LINE L1 -236 5885 5669 2131 125 3 0 chr2 167620882 167621177 -83066677 + AluSq SINE Alu 1 296 -17 493 266 94 70 chr2 167621177 167621442 -83066412 - L1ME4a LINE L1 -452 5669 5385 21 0 0 0 chr2 167621443 167621464 -83066390 + AT_rich Low_complexity Low_complexity 1 21 0 2719 204 97 3 chr2 167621545 167622142 -83065712 + MER82 DNA MER2_type 1 653 0 700 278 74 4 chr2 167622875 167623105 -83064749 - MIR SINE MIR -5 257 12 670 275 45 33 chr2 167623448 167623692 -83064162 + MIR SINE MIR 2 248 -14 259 257 36 21 chr2 167623766 167623906 -83063948 - Charlie7 DNA MER1_type -4 2608 2467 471 18 0 0 chr2 167624794 167624850 -83063004 + (CA)n Simple_repeat Simple_repeat 2 57 0 2219 109 3 3 chr2 167625262 167625564 -83062290 - AluSq SINE Alu -11 302 1 206 156 22 0 chr2 167625657 167625702 -83062152 + GA-rich Low_complexity Low_complexity 1 46 0 215 337 48 12 chr2 167625816 167625899 -83061955 - L2 LINE L2 0 3313 3228 1832 242 24 0 chr2 167625901 167626319 -83061535 + LTR40c LTR ERVL 1 428 -37 22 0 0 0 chr2 167626402 167626424 -83061430 + AT_rich Low_complexity Low_complexity 1 22 0 432 329 88 40 chr2 167627175 167627424 -83060430 - L2 LINE L2 0 3272 3012 2044 152 19 43 chr2 167627522 167627754 -83060100 - MLT1A1 LTR MaLR 0 365 144 2031 160 0 3 chr2 167627754 167628067 -83059787 + AluSx SINE Alu 1 312 0 2044 152 19 43 chr2 167628067 167628208 -83059646 - MLT1A1 LTR MaLR -221 144 1 1169 161 196 16 chr2 167628443 167628575 -83059279 - AluSg1 SINE Alu -8 301 194 328 20 20 20 chr2 167628575 167628625 -83059229 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 1169 161 196 16 chr2 167628625 167628747 -83059107 - AluSg1 SINE Alu -115 194 1 2074 125 19 27 chr2 167630304 167630673 -83057181 + MER47A DNA MER2_type 1 366 0 23 0 0 0 chr2 167630800 167630823 -83057031 + AT_rich Low_complexity Low_complexity 1 23 0 37 39 0 0 chr2 167631158 167631209 -83056645 + AT_rich Low_complexity Low_complexity 1 51 0 291 93 0 0 chr2 167631213 167631256 -83056598 - tRNA-Cys-TGC tRNA tRNA -32 43 1 2412 84 0 0 chr2 167634360 167634658 -83053196 - AluSx SINE Alu -14 298 1 2072 107 39 0 chr2 167634932 167635213 -83052641 + AluSc SINE Alu 1 292 -17 1801 178 3 3 chr2 167635242 167635545 -83052309 - AluSx SINE Alu -9 303 1 2471 99 0 0 chr2 167636392 167636705 -83051149 + AluSq SINE Alu 1 313 0 222 313 36 27 chr2 167636895 167637007 -83050847 + L3b LINE CR1 1390 1502 -81 380 191 13 172 chr2 167637265 167637320 -83050534 + L2 LINE L2 3182 3244 -69 2107 127 0 0 chr2 167637320 167637619 -83050235 - AluSx SINE Alu 0 312 14 380 191 13 172 chr2 167637619 167637720 -83050134 + L2 LINE L2 3244 3313 0 490 293 98 19 chr2 167637998 167638203 -83049651 + MIR SINE MIR 41 261 -1 1275 206 92 70 chr2 167638270 167638727 -83049127 - MLT1C LTR MaLR 0 467 1 331 369 43 0 chr2 167638858 167638999 -83048855 + MIR3 SINE MIR 37 183 -25 644 181 22 0 chr2 167639118 167639256 -83048598 + L1MA8 LINE L1 6148 6288 -3 2737 192 38 6 chr2 167639629 167640160 -83047694 + MER44D DNA MER2_type 2 604 -1 663 298 118 64 chr2 167640916 167641267 -83046587 - L2 LINE L2 0 3313 2982 2109 111 53 39 chr2 167641267 167641626 -83046228 - THE1B LTR MaLR 0 364 1 663 298 118 64 chr2 167641626 167642251 -83045603 - L2 LINE L2 -331 2982 2292 333 261 93 25 chr2 167642912 167643073 -83044781 - MIR SINE MIR 0 262 91 1803 212 69 5 chr2 167643935 167644327 -83043527 - MER47B DNA MER2_type -1 417 1 753 191 158 16 chr2 167646411 167646594 -83041260 - MER63A DNA MER1_type 0 210 2 1050 279 121 81 chr2 167646940 167647830 -83040024 - L3 LINE CR1 -28 1549 624 1576 169 7 28 chr2 167648181 167648465 -83039389 + AluJo SINE Alu 1 278 -34 393 113 0 0 chr2 167648468 167648521 -83039333 + (GA)n Simple_repeat Simple_repeat 2 54 0 766 192 9 14 chr2 167648521 167648877 -83038977 + GA-rich Low_complexity Low_complexity 1 354 0 687 256 6 14 chr2 167648893 167649388 -83038466 + GA-rich Low_complexity Low_complexity 1 490 0 254 175 0 18 chr2 167649541 167649598 -83038256 + GA-rich Low_complexity Low_complexity 4 59 0 224 324 114 9 chr2 167650262 167650367 -83037487 + L2 LINE L2 3117 3232 -40 452 319 7 21 chr2 167650389 167650530 -83037324 - L2 LINE L2 0 3272 3134 2115 137 7 0 chr2 167650821 167651127 -83036727 - AluSg SINE Alu -2 308 1 242 355 37 47 chr2 167651322 167651429 -83036425 + MIR SINE MIR 36 141 -67 202 114 29 0 chr2 167651700 167651735 -83036119 + T-rich Low_complexity Low_complexity 3 38 0 206 295 16 0 chr2 167652215 167652276 -83035578 + (CA)n Simple_repeat Simple_repeat 1 62 0 204 300 80 30 chr2 167652541 167652641 -83035213 + L2 LINE L2 2911 3015 -257 804 237 43 19 chr2 167652915 167653126 -83034728 + MIR SINE MIR 18 233 -29 484 120 120 11 chr2 167653768 167653860 -83033994 - THE1B LTR MaLR -51 313 212 4582 108 52 65 chr2 167653864 167654692 -83033162 - THE1B-int LTR MaLR -763 817 1 2016 137 69 29 chr2 167654692 167655042 -83032812 - THE1B LTR MaLR 0 364 1 1926 173 0 0 chr2 167655559 167655865 -83031989 - AluSx SINE Alu -6 306 1 2254 102 0 10 chr2 167656176 167656481 -83031373 + AluSx SINE Alu 11 312 0 411 132 19 9 chr2 167657036 167657142 -83030712 + (TA)n Simple_repeat Simple_repeat 1 107 0 1938 152 3 7 chr2 167657143 167657440 -83030414 - AluJb SINE Alu -16 296 1 25 0 0 0 chr2 167657693 167657718 -83030136 + AT_rich Low_complexity Low_complexity 1 25 0 337 331 62 21 chr2 167659440 167659585 -83028269 + MIR3 SINE MIR 10 160 -48 1054 202 0 39 chr2 167659585 167659818 -83028036 + MER58A DNA MER1_type 1 224 0 285 98 0 0 chr2 167661534 167661575 -83026279 + (GGA)n Simple_repeat Simple_repeat 2 42 0 25 0 0 0 chr2 167663113 167663138 -83024716 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 167663844 167663867 -83023987 + AT_rich Low_complexity Low_complexity 1 23 0 345 244 0 0 chr2 167664167 167664257 -83023597 + L1MC4 LINE L1 6614 6703 -1339 214 306 47 0 chr2 167666056 167666141 -83021713 - L2 LINE L2 0 3272 3184 286 330 91 23 chr2 167669319 167669495 -83018359 - L3b LINE CR1 -22 1561 1374 25 0 0 0 chr2 167670450 167670475 -83017379 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 167670643 167670666 -83017188 + AT_rich Low_complexity Low_complexity 1 23 0 270 326 12 81 chr2 167672491 167672663 -83015191 + L2 LINE L2 2691 2850 -464 191 326 68 15 chr2 167673820 167673952 -83013902 - L2 LINE L2 -930 2384 2246 672 285 113 26 chr2 167674039 167674428 -83013426 - LTR16A LTR ERVL 0 450 28 354 358 47 35 chr2 167674874 167675215 -83012639 - HERV16 LTR ERVL -808 4956 4612 743 308 17 0 chr2 167675422 167675659 -83012195 - HERV16 LTR ERVL -1308 4346 4106 1167 154 131 0 chr2 167675769 167676036 -83011818 - MER33 DNA MER1_type -22 302 1 3566 318 42 26 chr2 167676679 167678586 -83009268 - HERV16 LTR ERVL -1906 3090 1449 676 298 96 16 chr2 167678702 167679014 -83008840 - LTR16A LTR ERVL -5 445 109 500 328 197 14 chr2 167679228 167679518 -83008336 + L3 LINE CR1 1054 1396 -181 269 345 11 0 chr2 167679856 167679943 -83007911 + L2 LINE L2 3182 3269 -3 216 0 0 0 chr2 167681327 167681351 -83006503 + (TA)n Simple_repeat Simple_repeat 2 25 0 * 297 0 0 0 chr2 167681350 167681383 -83006471 + (TG)n Simple_repeat Simple_repeat 2 34 0 35 41 0 0 chr2 167681386 167681435 -83006419 + AT_rich Low_complexity Low_complexity 1 49 0 31 0 0 0 chr2 167681490 167681521 -83006333 + AT_rich Low_complexity Low_complexity 1 31 0 21 71 0 0 chr2 167681578 167681620 -83006234 + AT_rich Low_complexity Low_complexity 1 42 0 699 228 138 12 chr2 167682380 167682634 -83005220 - MLT1I LTR MaLR -26 383 98 257 164 82 0 chr2 167682730 167682791 -83005063 - MLT1I LTR MaLR -343 66 1 999 195 9 14 chr2 167683501 167683711 -83004143 + MER3 DNA MER1_type 1 209 0 180 0 0 0 chr2 167684122 167684142 -83003712 + (TG)n Simple_repeat Simple_repeat 1 20 0 448 315 107 28 chr2 167684197 167684413 -83003441 - MIR SINE MIR -10 252 20 457 297 16 60 chr2 167684615 167684737 -83003117 + MER5B DNA MER1_type 1 114 -64 1570 192 6 40 chr2 167684737 167684779 -83003075 - AluJo SINE Alu 0 312 270 207 0 0 0 chr2 167684779 167684802 -83003052 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1570 192 6 40 chr2 167684802 167685082 -83002772 - AluJo SINE Alu -42 270 1 457 297 16 60 chr2 167685082 167685141 -83002713 + MER5B DNA MER1_type 114 174 -4 198 0 0 0 chr2 167685735 167685757 -83002097 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2088 197 81 15 chr2 167686030 167686498 -83001356 + MLT1D LTR MaLR 1 499 -6 712 132 35 9 chr2 167687207 167687321 -83000533 - FLAM_C SINE Alu -21 122 6 3567 158 52 41 chr2 167687471 167688343 -82999511 - L1MB7 LINE L1 -17 6167 5287 1720 192 10 0 chr2 167688644 167688952 -82998902 - AluJb SINE Alu -1 311 1 475 258 96 18 chr2 167688981 167689148 -82998706 + L2 LINE L2 3104 3283 -30 319 286 123 70 chr2 167689584 167689811 -82998043 + MIR SINE MIR 18 256 -6 3321 54 0 69 chr2 167689947 167690428 -82997426 - LTR7 LTR ERV1 -2 448 1 52673 76 18 14 chr2 167690428 167698111 -82989743 - HERVH LTR ERV1 0 7713 1 3214 64 0 69 chr2 167698113 167698594 -82989260 - LTR7 LTR ERV1 -2 448 1 2212 96 0 0 chr2 167699420 167699712 -82988142 + AluSc SINE Alu 1 292 -17 592 227 77 21 chr2 167700519 167700566 -82987288 - L1MC4 LINE L1 -1 8041 7998 1389 218 13 53 chr2 167700566 167700943 -82986911 + MLT1A1 LTR MaLR 1 362 -3 592 227 77 21 chr2 167700943 167701089 -82986765 - L1MC4 LINE L1 -44 7998 7837 707 206 164 33 chr2 167701734 167701910 -82985944 - MER69 DNA AcHobo -4 2522 2370 1866 166 0 7 chr2 167701910 167702199 -82985655 + AluJb SINE Alu 2 288 -24 707 206 164 33 chr2 167702199 167702352 -82985502 - MER69 DNA AcHobo -156 2370 2150 222 333 27 27 chr2 167704473 167704584 -82983270 + L2 LINE L2 2981 3091 -181 733 286 36 48 chr2 167705765 167706116 -82981738 - L1ME LINE L1 -466 5655 5324 1885 185 56 52 chr2 167706190 167706693 -82981161 + MLT1D LTR MaLR 1 505 0 2822 241 124 35 chr2 167707037 167707131 -82980723 + L1MC4 LINE L1 6459 6543 -1499 2260 105 7 0 chr2 167707131 167707427 -82980427 + AluSx SINE Alu 13 310 -2 234 0 0 0 chr2 167707427 167707453 -82980401 + (TA)n Simple_repeat Simple_repeat 2 27 0 2822 241 124 35 chr2 167707453 167708687 -82979167 + L1MC4 LINE L1 6542 7906 -136 285 98 0 0 chr2 167708689 167708730 -82979124 + (TG)n Simple_repeat Simple_repeat 1 41 0 1385 172 68 74 chr2 167709150 167709446 -82978408 + AluJo SINE Alu 1 294 -18 335 292 82 35 chr2 167710491 167710662 -82977192 + L1ME2 LINE L1 1166 1344 -5079 473 134 0 12 chr2 167710667 167710749 -82977105 + L1PA15 LINE L1 6084 6164 -1 663 215 134 14 chr2 167710750 167710973 -82976881 + L1ME2 LINE L1 3619 3868 -3073 933 167 0 32 chr2 167710973 167711129 -82976725 - AluJo SINE Alu -153 159 9 437 256 61 6 chr2 167711163 167711343 -82976511 + L1ME2 LINE L1 4388 4577 -2364 3885 199 63 20 chr2 167711343 167712818 -82975036 + L1ME2 LINE L1 4913 6476 -503 1548 185 59 0 chr2 167712818 167713105 -82974749 + AluJo SINE Alu 1 304 -8 3885 199 63 20 chr2 167713105 167713408 -82974446 + L1ME2 LINE L1 6476 6765 -214 1011 258 95 5 chr2 167713429 167713820 -82974034 + L1ME2 LINE L1 4566 4991 -1950 553 235 101 14 chr2 167713817 167714034 -82973820 + L1ME2 LINE L1 5420 5655 -1286 * 41212 30 21 1 chr2 167714059 167720090 -82967764 - L1PA2 LINE L1 0 6155 1 1411 136 91 15 chr2 167720130 167720445 -82967409 - THE1C LTR MaLR 0 355 1 1829 224 69 90 chr2 167720468 167721256 -82966598 + L1ME2 LINE L1 5703 6443 -516 2270 84 0 20 chr2 167721256 167721552 -82966302 - AluY SINE Alu -8 303 14 1829 224 69 90 chr2 167721552 167722042 -82965812 + L1ME2 LINE L1 6443 6942 -17 502 219 16 0 chr2 167722122 167722245 -82965609 + L1ME2 LINE L1 6818 6942 -17 25 31 0 0 chr2 167722250 167722282 -82965572 + AT_rich Low_complexity Low_complexity 1 32 0 651 291 39 92 chr2 167722539 167723103 -82964751 + LTR67 LTR ERVL 16 549 -8 472 349 125 23 chr2 167724011 167724480 -82963374 - L2 LINE L2 -96 3217 2678 309 331 42 0 chr2 167724543 167724685 -82963169 + HAL1 LINE L1 35 182 -2325 459 210 344 10 chr2 167724851 167725046 -82962808 + HAL1 LINE L1 417 676 -1831 1467 265 110 43 chr2 167725056 167726110 -82961744 + HAL1 LINE L1 716 1840 -667 959 335 138 45 chr2 167726112 167727100 -82960754 - L2 LINE L2 -2153 1161 83 435 290 0 0 chr2 167727136 167727236 -82960618 + MER5A DNA MER1_type 10 109 -80 24 77 0 0 chr2 167727764 167727816 -82960038 + AT_rich Low_complexity Low_complexity 1 52 0 286 22 0 44 chr2 167727816 167727861 -82959993 + (CA)n Simple_repeat Simple_repeat 2 44 0 2030 152 33 25 chr2 167728996 167729357 -82958497 + THE1B LTR MaLR 1 364 0 1670 170 9 72 chr2 167729422 167729740 -82958114 - AluJb SINE Alu -14 298 1 24 0 0 0 chr2 167730447 167730471 -82957383 + AT_rich Low_complexity Low_complexity 1 24 0 588 224 54 14 chr2 167732691 167732838 -82955016 + MIR SINE MIR 110 262 0 348 292 36 108 chr2 167733230 167733480 -82954374 + L2 LINE L2 2926 3157 -115 258 242 0 61 chr2 167733602 167733668 -82954186 - MIR SINE MIR -7 255 194 673 279 184 17 chr2 167734361 167734908 -82952946 + L2 LINE L2 2679 3309 -4 232 277 0 32 chr2 167735301 167735395 -82952459 + L1MC4 LINE L1 6616 6706 -1336 218 154 77 39 chr2 167735971 167736023 -82951831 + L2 LINE L2 3219 3272 0 2128 131 0 6 chr2 167736471 167736785 -82951069 - AluSx SINE Alu 0 312 1 225 0 0 0 chr2 167736788 167736813 -82951041 + (T)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr2 167737169 167737194 -82950660 + AT_rich Low_complexity Low_complexity 1 25 0 371 306 20 10 chr2 167738356 167738454 -82949400 - MER91A DNA MER1_type -97 99 1 228 367 11 11 chr2 167740515 167740605 -82947249 - MIR SINE MIR -161 101 12 1115 165 68 8 chr2 167742111 167742348 -82945506 - L1MA9 LINE L1 -6 6306 6056 237 65 0 0 chr2 167743592 167743623 -82944231 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2048 137 0 0 chr2 167743623 167743907 -82943947 - AluSx SINE Alu -28 284 1 225 0 0 0 chr2 167743959 167743984 -82943870 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1529 149 39 52 chr2 167745187 167745495 -82942359 - AluJb SINE Alu -8 304 1 526 249 57 40 chr2 167746198 167746375 -82941479 + MIR SINE MIR 16 195 -67 204 250 0 0 chr2 167746696 167746744 -82941110 - MIR SINE MIR -62 200 153 231 264 136 0 chr2 167746747 167746872 -82940982 + MER104 DNA Tc2 1 142 -38 656 201 47 40 chr2 167746894 167747043 -82940811 - MIR SINE MIR -112 150 1 2237 73 14 0 chr2 167747893 167748179 -82939675 - AluY SINE Alu -17 294 5 670 172 22 30 chr2 167748340 167748474 -82939380 - FLAM_C SINE Alu 0 133 1 187 204 143 0 chr2 167748495 167748544 -82939310 - L2 LINE L2 -1 3271 3216 1751 88 0 0 chr2 167750265 167750481 -82937373 - AluSc SINE Alu -7 302 87 513 149 0 0 chr2 167750481 167750555 -82937299 + AluS SINE Alu 3 76 -233 2101 113 3 3 chr2 167751188 167751490 -82936364 - AluSq SINE Alu -11 302 1 2166 109 0 0 chr2 167751519 167751838 -82936016 + AluSx SINE Alu 1 319 0 1390 94 0 6 chr2 167751867 167752047 -82935807 + AluSq SINE Alu 1 179 -134 28 0 0 0 chr2 167753476 167753504 -82934350 + AT_rich Low_complexity Low_complexity 1 28 0 222 335 95 76 chr2 167754552 167754698 -82933156 - L2 LINE L2 -36 3236 3094 2051 147 3 3 chr2 167754698 167755005 -82932849 + AluJo SINE Alu 1 307 -5 222 335 95 76 chr2 167755005 167755372 -82932482 - L2 LINE L2 -178 3094 2691 211 330 124 36 chr2 167755485 167755517 -82932337 - L2 LINE L2 -829 2485 2457 2235 137 25 6 chr2 167755517 167755874 -82931980 + THE1B LTR MaLR 1 364 0 211 330 124 36 chr2 167755874 167756147 -82931707 - L2 LINE L2 -857 2457 2153 278 279 67 19 chr2 167757044 167757148 -82930706 + L2 LINE L2 3200 3308 -5 811 161 0 29 chr2 167757313 167757450 -82930404 - FLAM_C SINE Alu 0 133 1 398 265 106 65 chr2 167758025 167758195 -82929659 - MER5B DNA MER1_type 0 178 2 26 0 0 0 chr2 167758461 167758487 -82929367 + AT_rich Low_complexity Low_complexity 1 26 0 198 103 0 0 chr2 167758934 167758963 -82928891 + (A)n Simple_repeat Simple_repeat 1 29 0 289 211 0 0 chr2 167759265 167759322 -82928532 - MER5A DNA MER1_type -6 183 127 836 228 150 67 chr2 167760799 167761185 -82926669 - LTR41 LTR ERVL -20 753 336 871 241 117 11 chr2 167761493 167761759 -82926095 - LTR41 LTR ERVL -477 296 3 4209 291 62 13 chr2 167762276 167763042 -82924812 - HERVL LTR ERVL -1210 4444 3717 288 0 0 0 chr2 167763042 167763074 -82924780 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4209 291 62 13 chr2 167763074 167763704 -82924150 - HERVL LTR ERVL -1937 3717 2979 1602 191 24 10 chr2 167763715 167764013 -82923841 + AluJb SINE Alu 1 302 -10 3202 265 87 16 chr2 167764054 167764669 -82923185 - HERVL LTR ERVL -2885 2879 2176 1511 116 17 30 chr2 167764669 167764902 -82922952 + MER30 DNA MER1_type 1 230 0 3202 265 87 16 chr2 167764902 167765204 -82922650 - HERVL LTR ERVL -3588 2176 1897 250 351 23 30 chr2 167765402 167765533 -82922321 - HERVL LTR ERVL -4140 1624 1495 3783 129 3 2 chr2 167766045 167766617 -82921237 - HERVK3 LTR ERVK -4584 2659 2087 3289 157 28 4 chr2 167766617 167767160 -82920694 - LTR6A LTR ERV1 0 564 9 1689 122 77 55 chr2 167767504 167767866 -82919988 + THE1C LTR MaLR 5 374 -1 914 255 57 5 chr2 167768924 167769136 -82918718 - MER58A DNA MER1_type -1 223 1 711 139 9 0 chr2 167769952 167770060 -82917794 + FLAM_A SINE Alu 18 126 -16 381 258 104 33 chr2 167770472 167770712 -82917142 + L1MC4a LINE L1 5631 5887 -1921 21 0 0 0 chr2 167770754 167770775 -82917079 + AT_rich Low_complexity Low_complexity 1 21 0 1372 256 123 54 chr2 167770947 167771747 -82916107 + HAL1 LINE L1 1615 2469 -38 1177 231 106 0 chr2 167771773 167772084 -82915770 + MER2 DNA MER2_type 1 344 0 751 281 67 5 chr2 167772085 167772295 -82915559 + MIR SINE MIR 24 246 -16 611 306 188 17 chr2 167772569 167773085 -82914769 - L2 LINE L2 -236 3036 2440 2151 89 41 3 chr2 167773427 167773719 -82914135 + AluY SINE Alu 1 303 -8 360 0 0 0 chr2 167773847 167773887 -82913967 + (TG)n Simple_repeat Simple_repeat 2 41 0 323 387 87 17 chr2 167774216 167774497 -82913357 - L2 LINE L2 -519 2795 2484 1521 166 65 39 chr2 167774497 167774853 -82913001 - MLT1A1 LTR MaLR 0 365 1 323 387 87 17 chr2 167774853 167774917 -82912937 - L2 LINE L2 -830 2484 2426 810 124 0 9 chr2 167774987 167775100 -82912754 + FLAM_A SINE Alu 20 131 -11 552 221 96 66 chr2 167775100 167775371 -82912483 - MER46C DNA MER2_type -52 286 8 267 93 0 0 chr2 167776618 167776661 -82911193 + (TG)n Simple_repeat Simple_repeat 2 44 0 22 0 0 0 chr2 167776807 167776829 -82911025 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 167777990 167778013 -82909841 + AT_rich Low_complexity Low_complexity 1 23 0 354 61 0 0 chr2 167781705 167781754 -82906100 + (GA)n Simple_repeat Simple_repeat 2 50 0 1475 103 115 12 chr2 167781754 167781997 -82905857 - MER46B DNA MER2_type -93 143 1 21 0 0 0 chr2 167782052 167782073 -82905781 + AT_rich Low_complexity Low_complexity 1 21 0 338 89 0 18 chr2 167782387 167782443 -82905411 + (CA)n Simple_repeat Simple_repeat 1 55 0 340 222 0 0 chr2 167782520 167782583 -82905271 + L2 LINE L2 3251 3313 0 231 308 58 19 chr2 167782794 167782898 -82904956 + MIR3 SINE MIR 97 204 -4 186 43 0 0 chr2 167782913 167782936 -82904918 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 307 95 0 0 chr2 167783571 167783613 -82904241 + L2 LINE L2 3263 3304 -9 306 273 165 6 chr2 167784107 167784283 -82903571 - L1ME4a LINE L1 -223 5898 5695 813 164 0 7 chr2 167784329 167784469 -82903385 - FLAM_C SINE Alu -2 141 3 1473 214 50 0 chr2 167784473 167784631 -82903223 - AluJb SINE Alu -18 294 114 216 0 0 0 chr2 167784631 167784655 -82903199 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1473 214 50 0 chr2 167784655 167784776 -82903078 - AluJb SINE Alu -197 115 1 2389 117 22 6 chr2 167785166 167785524 -82902330 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr2 167785859 167785887 -82901967 + AT_rich Low_complexity Low_complexity 1 28 0 938 251 152 41 chr2 167786513 167786975 -82900879 + MLT1H LTR MaLR 3 515 -34 953 176 0 0 chr2 167787646 167787805 -82900049 + MER58A DNA MER1_type 43 201 -23 255 244 158 0 chr2 167788737 167788819 -82899035 - MIR SINE MIR -11 251 157 1506 150 92 15 chr2 167789415 167789708 -82898146 - AluSx SINE Alu 0 312 1 637 266 142 51 chr2 167790787 167791103 -82896751 - L1ME3A LINE L1 -268 5902 5558 186 103 0 0 chr2 167791157 167791186 -82896668 + (CA)n Simple_repeat Simple_repeat 1 29 0 2608 42 0 3 chr2 167791386 167791695 -82896159 - AluY SINE Alu -3 308 1 527 296 136 0 chr2 167792853 167793066 -82894788 - MIR SINE MIR -15 247 6 191 223 11 85 chr2 167793226 167793320 -82894534 - L2 LINE L2 -95 3218 3132 2887 13 0 0 chr2 167793621 167793939 -82893915 - AluYb8 SINE Alu 0 318 1 487 303 15 0 chr2 167793969 167794101 -82893753 - L2 LINE L2 -2 3270 3137 26 0 0 0 chr2 167794875 167794901 -82892953 + AT_rich Low_complexity Low_complexity 1 26 0 28 29 0 0 chr2 167795173 167795208 -82892646 + AT_rich Low_complexity Low_complexity 1 35 0 1944 160 0 0 chr2 167795308 167795614 -82892240 + AluSx SINE Alu 6 311 -1 415 309 84 35 chr2 167795791 167796102 -82891752 - MLT1L LTR MaLR -73 542 217 188 288 17 0 chr2 167796275 167796334 -82891520 + L2 LINE L2 3187 3246 -67 918 211 34 29 chr2 167796542 167796746 -82891108 - MLT1A2 LTR MaLR -165 209 5 21 36 0 0 chr2 167796746 167796774 -82891080 + AT_rich Low_complexity Low_complexity 1 28 0 463 321 112 12 chr2 167796957 167797174 -82890680 - MIR SINE MIR -1 261 25 189 0 0 0 chr2 167797973 167797994 -82889860 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 306 325 40 0 chr2 167797994 167798120 -82889734 - L3 LINE CR1 -79 1498 1368 775 235 36 68 chr2 167798125 167798376 -82889478 - MLT1I LTR MaLR -5 404 162 183 325 26 61 chr2 167798545 167798659 -82889195 - L3 LINE CR1 -293 1284 1175 586 304 16 27 chr2 167799044 167799228 -82888626 + MIR SINE MIR 10 191 -71 353 255 125 98 chr2 167799431 167799569 -82888285 + MER5A DNA MER1_type 1 147 -42 1067 127 5 21 chr2 167799569 167799758 -82888096 - MER53 DNA DNA 0 189 4 353 255 125 98 chr2 167799758 167799803 -82888051 + MER5A DNA MER1_type 147 189 0 219 147 0 0 chr2 167799850 167799884 -82887970 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 763 127 62 4 chr2 167799884 167800131 -82887723 + GA-rich Low_complexity Low_complexity 1 261 0 270 0 0 0 chr2 167800324 167800354 -82887500 + (T)n Simple_repeat Simple_repeat 1 30 0 436 227 97 51 chr2 167800815 167800991 -82886863 + MIR SINE MIR 79 262 0 184 209 47 0 chr2 167802556 167802599 -82885255 - L2 LINE L2 -4 3309 3265 190 111 0 44 chr2 167802615 167802660 -82885194 + (GGAGAA)n Simple_repeat Simple_repeat 4 46 0 240 322 125 26 chr2 167802905 167803057 -82884797 + MIR SINE MIR 8 174 -88 743 240 51 24 chr2 167803084 167803338 -82884516 + MIR SINE MIR 2 262 0 254 128 0 0 chr2 167803641 167803680 -82884174 + FLAM SINE Alu 88 126 -7 181 200 25 0 chr2 167804070 167804110 -82883744 - L2 LINE L2 -5 3267 3227 745 251 30 44 chr2 167804758 167805029 -82882825 + L1MC4a LINE L1 5613 5879 -1929 29 0 0 0 chr2 167805286 167805315 -82882539 + AT_rich Low_complexity Low_complexity 1 29 0 1461 251 19 67 chr2 167807034 167807109 -82880745 + MER34 LTR ERV1 1 78 -464 1967 147 7 7 chr2 167807109 167807409 -82880445 + AluSx SINE Alu 1 300 -12 1461 251 19 67 chr2 167807409 167807902 -82879952 + MER34 LTR ERV1 78 542 0 21 71 0 0 chr2 167807913 167807955 -82879899 + AT_rich Low_complexity Low_complexity 1 42 0 245 267 167 0 chr2 167808025 167808145 -82879709 - L1ME LINE L1 -348 5773 5634 889 282 78 46 chr2 167809438 167810069 -82877785 - HAL1 LINE L1 0 2507 1857 2082 243 78 32 chr2 167810393 167811001 -82876853 - HAL1 LINE L1 -658 1849 1191 889 78 78 0 chr2 167811001 167811130 -82876724 - MER85 DNA T2_type 0 139 1 2082 243 78 32 chr2 167811130 167811360 -82876494 - HAL1 LINE L1 -1316 1191 973 533 295 68 32 chr2 167811399 167811650 -82876204 + MIR SINE MIR 2 261 -1 689 213 7 20 chr2 167811651 167811801 -82876053 - HAL1 LINE L1 -1575 932 785 303 273 45 39 chr2 167813458 167813580 -82874274 - MIR SINE MIR -38 224 99 580 221 9 0 chr2 167813580 167813693 -82874161 + MER81 DNA DNA 1 114 0 303 273 45 39 chr2 167813693 167813724 -82874130 - MIR SINE MIR -163 99 70 1586 184 7 24 chr2 167813820 167814114 -82873740 - AluJo SINE Alu -23 289 1 208 250 28 28 chr2 167814267 167814339 -82873515 - MIR3 SINE MIR -48 160 89 4053 164 43 1 chr2 167815470 167816173 -82871681 - MER44D DNA MER2_type 0 605 2 860 68 76 0 chr2 167817553 167817671 -82870183 + AluY SINE Alu 180 306 -5 231 103 0 0 chr2 167817841 167817880 -82869974 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 241 196 0 39 chr2 167818968 167819019 -82868835 + L2 LINE L2 3265 3313 0 230 0 0 32 chr2 167819165 167819196 -82868658 + (TAAAAA)n Simple_repeat Simple_repeat 1 30 0 250 235 185 0 chr2 167819276 167819357 -82868497 + MLT1L LTR MaLR 503 598 -17 1332 119 42 19 chr2 167819782 167820042 -82867812 - MER33 DNA MER1_type -23 301 36 273 301 252 0 chr2 167820564 167820687 -82867167 + MIR SINE MIR 1 154 -108 1472 266 96 11 chr2 167820690 167821148 -82866706 + MLT1J LTR MaLR 1 497 -14 232 321 0 45 chr2 167821152 167821264 -82866590 + MIR SINE MIR 156 262 0 228 250 24 48 chr2 167822125 167822209 -82865645 + MIR SINE MIR 180 261 -1 312 275 125 62 chr2 167823219 167823379 -82864475 + MER91A DNA MER1_type 1 170 -26 264 278 62 21 chr2 167823500 167823597 -82864257 - MIR3 SINE MIR 0 208 108 1395 141 35 51 chr2 167823600 167823855 -82863999 + MSTB LTR MaLR 5 255 -171 1204 214 0 9 chr2 167823858 167824082 -82863772 - AluJb SINE Alu -22 290 69 724 206 6 31 chr2 167824082 167824242 -82863612 - AluJo SINE Alu -156 156 1 729 156 220 0 chr2 167824242 167824383 -82863471 + MSTB LTR MaLR 255 426 0 23 54 0 0 chr2 167824415 167824452 -82863402 + AT_rich Low_complexity Low_complexity 1 37 0 343 323 23 118 chr2 167824664 167824927 -82862927 + L2 LINE L2 3026 3263 -9 2548 207 14 56 chr2 167825186 167825779 -82862075 + MLT1E LTR MaLR 26 593 0 721 136 11 38 chr2 167825826 167826010 -82861844 + GA-rich Low_complexity Low_complexity 2 180 0 288 352 65 20 chr2 167826400 167826517 -82861337 - MIR SINE MIR -6 256 125 279 0 0 0 chr2 167826517 167826548 -82861306 + (CA)n Simple_repeat Simple_repeat 2 32 0 288 352 65 20 chr2 167826548 167826629 -82861225 - MIR SINE MIR -137 125 49 439 300 72 4 chr2 167826781 167827031 -82860823 + L1M3 LINE L1 5299 5565 -603 2255 87 7 3 chr2 167827243 167827542 -82860312 + AluSg SINE Alu 1 300 -10 396 0 0 0 chr2 167829112 167829156 -82858698 + (TG)n Simple_repeat Simple_repeat 1 44 0 289 189 21 0 chr2 167829157 167829252 -82858602 + (TA)n Simple_repeat Simple_repeat 1 97 0 29 0 0 0 chr2 167831758 167831787 -82856067 + AT_rich Low_complexity Low_complexity 1 29 0 14169 176 48 88 chr2 167833158 167833483 -82854371 - L1MA6 LINE L1 0 7002 6665 351 154 0 15 chr2 167833483 167833548 -82854306 + MADE1 DNA Mariner 17 80 0 14169 176 48 88 chr2 167833548 167834689 -82853165 - L1MA6 LINE L1 -337 6665 5479 1467 181 73 7 chr2 167834689 167834977 -82852877 - AluJb SINE Alu 0 312 6 14169 176 48 88 chr2 167834977 167838645 -82849209 - L1MA6 LINE L1 -1523 5479 2022 488 245 50 57 chr2 167838645 167838804 -82849050 - AluJo SINE Alu -74 238 81 14169 176 48 88 chr2 167838804 167840746 -82847108 - L1MA6 LINE L1 -4980 2022 3 398 245 166 53 chr2 167840890 167841020 -82846834 + LTR16A1 LTR ERVL 51 165 -292 1212 189 50 98 chr2 167841020 167841458 -82846396 + MER96B DNA MER1_type 1 417 0 398 245 166 53 chr2 167841458 167841629 -82846225 + LTR16A1 LTR ERVL 165 386 -71 266 321 21 64 chr2 167841680 167841762 -82846092 - MIR SINE MIR -128 134 57 1697 166 7 4 chr2 167841762 167842071 -82845783 + AluJb SINE Alu 3 312 0 266 321 21 64 chr2 167842071 167842126 -82845728 - MIR SINE MIR -205 57 1 2218 147 102 34 chr2 167842284 167842753 -82845101 + MLT1D LTR MaLR 1 501 -4 25 0 0 0 chr2 167842879 167842904 -82844950 + AT_rich Low_complexity Low_complexity 1 25 0 1613 164 55 33 chr2 167843809 167844174 -82843680 - THE1C LTR MaLR -2 373 1 23 0 0 0 chr2 167844400 167844423 -82843431 + AT_rich Low_complexity Low_complexity 1 23 0 2293 100 54 17 chr2 167845142 167845493 -82842361 - THE1B LTR MaLR 0 364 1 11513 100 2 5 chr2 167845494 167847077 -82840777 - THE1B-int LTR MaLR -1 1579 1 933 129 18 37 chr2 167847077 167847138 -82840716 - THE1B LTR MaLR 0 355 294 1702 127 46 120 chr2 167847138 167847531 -82840323 + THE1B LTR MaLR 1 364 0 933 129 18 37 chr2 167847531 167847632 -82840222 - THE1B LTR MaLR -61 294 196 249 278 0 0 chr2 167847690 167847744 -82840110 + L2 LINE L2 3205 3258 -14 317 265 10 10 chr2 167848026 167848128 -82839726 + (TA)n Simple_repeat Simple_repeat 1 102 0 209 366 42 0 chr2 167848136 167848207 -82839647 + MIR3 SINE MIR 92 165 -43 402 265 72 63 chr2 167848779 167848974 -82838880 - MIR SINE MIR -50 212 10 204 120 0 60 chr2 167850041 167850091 -82837763 + (TAAAAA)n Simple_repeat Simple_repeat 3 49 0 2273 103 3 13 chr2 167850549 167850861 -82836993 - AluSq SINE Alu -4 309 1 1740 228 26 45 chr2 167851026 167851664 -82836190 + L1MC4 LINE L1 6380 7074 -819 1504 260 129 30 chr2 167851891 167852653 -82835201 + L1MC4 LINE L1 7075 7911 -131 318 299 130 23 chr2 167854362 167854539 -82833315 - MER91A DNA MER1_type 0 196 1 2036 115 14 3 chr2 167855195 167855490 -82832364 - AluSx SINE Alu -2 310 13 599 239 113 48 chr2 167856923 167857153 -82830701 - MIR SINE MIR -16 246 2 497 342 75 4 chr2 167857335 167857563 -82830291 + MIR SINE MIR 7 250 -12 1581 219 14 14 chr2 167857738 167858103 -82829751 - MLT1A1 LTR MaLR 0 365 1 210 243 86 14 chr2 167858170 167858240 -82829614 + MIR SINE MIR 116 190 -72 1717 148 0 0 chr2 167858333 167858590 -82829264 + AluSx SINE Alu 48 304 -8 33 0 0 0 chr2 167859344 167859377 -82828477 + AT_rich Low_complexity Low_complexity 1 33 0 2197 124 0 0 chr2 167859448 167859755 -82828099 + AluY SINE Alu 1 307 -4 315 217 0 0 chr2 167862743 167862750 -82825104 + (TA)n Simple_repeat Simple_repeat 2 8 -76 1731 153 109 0 chr2 167862750 167863063 -82824791 + MER7A DNA MER2_type 2 346 0 315 217 0 0 chr2 167863063 167863138 -82824716 + (TA)n Simple_repeat Simple_repeat 7 84 0 298 297 38 44 chr2 167863340 167863526 -82824328 + MIR SINE MIR 34 217 -45 217 271 0 0 chr2 167863973 167864021 -82823833 + (TG)n Simple_repeat Simple_repeat 2 49 0 2437 83 0 0 chr2 167864134 167864435 -82823419 - AluSx SINE Alu -11 301 1 416 361 62 12 chr2 167864909 167865150 -82822704 + L3 LINE CR1 866 1118 -459 32 0 0 0 chr2 167865209 167865241 -82822613 + AT_rich Low_complexity Low_complexity 1 32 0 438 273 198 22 chr2 167865283 167865602 -82822252 + L3 LINE CR1 1123 1497 -80 499 200 145 21 chr2 167865684 167865829 -82822025 - MER103 DNA DNA -1 165 3 23 33 0 0 chr2 167865966 167865996 -82821858 + AT_rich Low_complexity Low_complexity 1 30 0 238 360 0 20 chr2 167866365 167866465 -82821389 + MER5B DNA MER1_type 1 98 -80 1055 214 92 62 chr2 167866536 167867121 -82820733 - L1MC5 LINE L1 -53 7908 7306 240 130 0 11 chr2 167867449 167867526 -82820328 + MER96B DNA MER1_type? 193 351 -66 1071 172 118 113 chr2 167867606 167868082 -82819772 - L1MC5 LINE L1 -722 7239 6762 278 221 16 8 chr2 167870330 167870413 -82817441 + AluS SINE Alu 1 58 -245 1199 162 0 24 chr2 167870413 167870623 -82817231 + AluJo SINE Alu 98 302 -10 212 351 108 40 chr2 167871789 167871937 -82815917 + L2 LINE L2 3112 3269 -3 1835 109 8 0 chr2 167872902 167873159 -82814695 + AluSq SINE Alu 42 300 -13 330 229 67 38 chr2 167874328 167874433 -82813421 - MIR3 SINE MIR -49 159 52 529 322 122 29 chr2 167874821 167875206 -82812648 + L2 LINE L2 1906 2326 -988 22 0 0 0 chr2 167876735 167876757 -82811097 + AT_rich Low_complexity Low_complexity 1 22 0 396 0 0 0 chr2 167877218 167877262 -82810592 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 294 252 107 0 chr2 167877373 167877504 -82810350 - L1ME4a LINE L1 -2 6119 5975 316 192 0 14 chr2 167877661 167877734 -82810120 - L1ME4a LINE L1 -248 5873 5802 2471 171 48 45 chr2 167877976 167878537 -82809317 + L1MB3 LINE L1 5613 6175 -8 229 325 95 16 chr2 167878699 167878825 -82809029 + MIR SINE MIR 19 154 -108 28 48 0 0 chr2 167878859 167878901 -82808953 + AT_rich Low_complexity Low_complexity 1 42 0 244 321 107 18 chr2 167879343 167879511 -82808343 - L2 LINE L2 -194 3078 2896 208 347 40 0 chr2 167879706 167879781 -82808073 - L2 LINE L2 -665 2649 2572 731 109 0 0 chr2 167880231 167880332 -82807522 - AluSg/x SINE Alu -25 287 187 300 381 119 0 chr2 167880372 167880506 -82807348 - L2 LINE L2 0 3272 3123 501 234 36 9 chr2 167880560 167880671 -82807183 - MER81 DNA DNA 0 114 1 34 0 0 0 chr2 167881497 167881531 -82806323 + AT_rich Low_complexity Low_complexity 1 34 0 262 290 0 14 chr2 167881919 167881988 -82805866 + CT-rich Low_complexity Low_complexity 3 70 0 264 309 85 0 chr2 167882005 167882099 -82805755 - L2 LINE L2 -20 3293 3192 183 42 0 0 chr2 167882533 167882557 -82805297 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 395 242 34 64 chr2 167882645 167882817 -82805037 + MLT1J LTR MaLR 291 437 -74 2488 309 146 19 chr2 167882892 167884301 -82803553 - L2 LINE L2 -656 2658 1070 345 263 158 15 chr2 167885785 167885918 -82801936 + MIR3 SINE MIR 21 172 -36 22 0 0 0 chr2 167886020 167886042 -82801812 + AT_rich Low_complexity Low_complexity 1 22 0 65 56 0 0 chr2 167886379 167886486 -82801368 + AT_rich Low_complexity Low_complexity 1 107 0 1862 171 3 3 chr2 167886547 167886856 -82800998 - AluJb SINE Alu -3 309 1 2090 105 3 16 chr2 167887039 167887344 -82800510 - AluSx SINE Alu -11 301 1 190 339 65 0 chr2 167888119 167888181 -82799673 - L2 LINE L2 0 3272 3207 302 344 65 62 chr2 167889127 167889418 -82798436 - L2 LINE L2 -516 2798 2507 183 138 0 0 chr2 167889520 167889549 -82798305 + L2 LINE L2 3243 3271 -1 216 200 0 0 chr2 167890157 167890202 -82797652 + (CA)n Simple_repeat Simple_repeat 1 45 0 282 280 70 31 chr2 167890296 167890404 -82797450 + MIR SINE MIR 3 118 -90 1767 258 112 60 chr2 167891035 167891561 -82796293 + L1MC4a LINE L1 2110 2607 -3539 225 163 0 0 chr2 167891561 167891604 -82796250 + HSMAR1 DNA Mariner 1 43 -1244 1767 258 112 60 chr2 167891604 167892246 -82795608 + L1MC4a LINE L1 2607 3383 -2763 2283 93 0 31 chr2 167892385 167892708 -82795146 + AluSq SINE Alu 1 313 0 643 206 44 56 chr2 167892723 167892981 -82794873 + L1MC4a LINE L1 3713 3970 -2176 323 234 45 9 chr2 167892993 167893104 -82794750 + L1MC4a LINE L1 4394 4508 -1638 196 333 265 0 chr2 167893114 167893276 -82794578 + MIR SINE MIR 48 252 -10 942 242 18 81 chr2 167893907 167894180 -82793674 + MIR SINE MIR 2 257 -5 255 354 66 22 chr2 167894276 167894457 -82793397 + MIR SINE MIR 64 252 -10 266 250 79 44 chr2 167894966 167895218 -82792636 + L1MC4a LINE L1 4995 5255 -891 311 262 94 13 chr2 167895467 167895616 -82792238 + L1MC4a LINE L1 5735 5895 -1913 2333 79 0 0 chr2 167895844 167896136 -82791718 + AluY SINE Alu 1 292 -19 308 279 90 26 chr2 167896148 167896388 -82791466 + L1ME LINE L1 5546 5811 -310 2074 125 0 7 chr2 167897515 167897811 -82790043 - AluSx SINE Alu -18 294 1 2023 103 50 4 chr2 167898891 167899172 -82788682 - AluSx SINE Alu -18 294 1 25 0 0 0 chr2 167899546 167899571 -82788283 + AT_rich Low_complexity Low_complexity 1 25 0 223 288 113 0 chr2 167900023 167900103 -82787751 - MIR SINE MIR -45 217 129 374 0 22 0 chr2 167900505 167900551 -82787303 + (TG)n Simple_repeat Simple_repeat 2 48 0 1272 193 83 4 chr2 167901863 167902117 -82785737 + AluJo SINE Alu 16 289 -23 25 0 0 0 chr2 167902307 167902332 -82785522 + AT_rich Low_complexity Low_complexity 1 25 0 2217 110 0 7 chr2 167902724 167903024 -82784830 - AluSx SINE Alu -12 300 3 222 325 88 44 chr2 167903974 167904088 -82783766 - MER5B DNA MER1_type -4 174 56 2351 62 0 3 chr2 167904150 167904442 -82783412 - AluY SINE Alu -20 291 1 228 232 96 0 chr2 167904805 167904898 -82782956 - MIR SINE MIR -58 204 101 24 32 0 0 chr2 167905598 167905629 -82782225 + AT_rich Low_complexity Low_complexity 1 31 0 40 21 0 0 chr2 167906593 167906640 -82781214 + AT_rich Low_complexity Low_complexity 1 47 0 1108 240 90 95 chr2 167906986 167907552 -82780302 + MER21B LTR ERV1 144 706 -157 1379 56 36 31 chr2 167907677 167907872 -82779982 - L1PB1 LINE L1 0 6151 5956 4399 120 9 19 chr2 167908189 167908889 -82778965 + L1PB3 LINE L1 5255 5947 -207 2140 100 13 3 chr2 167909312 167909611 -82778243 - AluY SINE Alu -9 302 1 1942 139 0 16 chr2 167909613 167909922 -82777932 - AluJb SINE Alu -8 304 1 655 248 122 56 chr2 167912122 167912425 -82775429 + L2 LINE L2 2652 2974 -340 2917 96 23 0 chr2 167912441 167912838 -82775016 + MLT2A2 LTR ERVL 1 406 -47 357 268 0 0 chr2 167912843 167912960 -82774894 + L1MC3 LINE L1 6571 6703 -1131 187 588 0 0 chr2 167913182 167913267 -82774587 + G-rich Low_complexity Low_complexity 1 85 0 1069 174 37 50 chr2 167913428 167913669 -82774185 + MLT1A2 LTR MaLR 136 373 -1 373 206 11 22 chr2 167913673 167913765 -82774089 + LTR40b LTR ERVL 298 388 -74 233 264 33 0 chr2 167913752 167913843 -82774011 + MER103 DNA DNA 71 164 -2 * 527 202 10 0 chr2 167914310 167914409 -82773445 - MLT1E LTR MaLR -18 575 476 562 299 67 36 chr2 167916040 167916264 -82771590 - MIR SINE MIR -31 231 1 269 295 82 22 chr2 167916264 167916379 -82771475 + MIR SINE MIR 97 221 -41 1698 159 11 7 chr2 167917428 167917711 -82770143 + AluJo SINE Alu 5 288 -24 24 0 0 0 chr2 167917804 167917828 -82770026 + AT_rich Low_complexity Low_complexity 1 24 0 31 26 0 0 chr2 167918696 167918734 -82769120 + AT_rich Low_complexity Low_complexity 1 38 0 432 287 182 43 chr2 167922554 167923043 -82764811 - L1 LINE L1 -1534 4612 4051 7801 69 1 0 chr2 167924873 167926676 -82761178 + L1PA6 LINE L1 4353 6154 0 276 53 0 0 chr2 167927424 167927462 -82760392 + (TTG)n Simple_repeat Simple_repeat 1 38 0 1985 133 0 0 chr2 167927462 167927741 -82760113 - AluSx SINE Alu -33 279 1 463 297 147 30 chr2 167928209 167928441 -82759413 + MIR SINE MIR 4 262 0 1380 209 18 109 chr2 167929098 167929604 -82758250 + L1M3c LINE L1 922 1381 -4760 6903 38 9 5 chr2 167929604 167930463 -82757391 + L1PA4 LINE L1 5282 6144 -11 475 262 88 6 chr2 167931957 167932072 -82755782 + MIR SINE MIR 52 156 -106 1637 221 82 16 chr2 167932072 167932510 -82755344 + MLT1C LTR MaLR 1 467 0 475 262 88 6 chr2 167932510 167932588 -82755266 + MIR SINE MIR 156 262 0 23 68 0 0 chr2 167933374 167933418 -82754436 + AT_rich Low_complexity Low_complexity 1 44 0 25 0 0 0 chr2 167933712 167933737 -82754117 + AT_rich Low_complexity Low_complexity 1 25 0 481 238 32 148 chr2 167933746 167934023 -82753831 - MIR SINE MIR -11 251 7 2287 95 0 10 chr2 167934519 167934824 -82753030 - AluSg SINE Alu -8 302 1 26 30 0 0 chr2 167935536 167935569 -82752285 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr2 167935646 167935674 -82752180 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 167935764 167935788 -82752066 + AT_rich Low_complexity Low_complexity 1 24 0 591 208 134 7 chr2 167936344 167936493 -82751361 - MER58A DNA MER1_type -38 186 19 234 342 144 42 chr2 167936697 167937101 -82750753 + L2 LINE L2 2825 3269 -3 458 223 32 0 chr2 167937728 167937822 -82750032 - MER5A DNA MER1_type -32 157 61 625 55 33 60 chr2 167937958 167938141 -82749713 + (TA)n Simple_repeat Simple_repeat 2 179 0 569 303 142 11 chr2 167938147 167938414 -82749440 + L2 LINE L2 3008 3309 -4 1083 322 179 56 chr2 167938479 167939684 -82748170 + L3 LINE CR1 223 1576 -1 22 35 0 0 chr2 167941190 167941219 -82746635 + AT_rich Low_complexity Low_complexity 1 29 0 306 0 0 0 chr2 167941497 167941531 -82746323 + (TG)n Simple_repeat Simple_repeat 2 35 0 21 36 0 0 chr2 167943849 167943877 -82743977 + AT_rich Low_complexity Low_complexity 1 28 0 316 243 27 68 chr2 167944073 167944221 -82743633 + L1MC5 LINE L1 3732 3873 -2273 427 317 101 13 chr2 167944428 167944655 -82743199 + MLT1H LTR MaLR 1 247 -302 319 235 40 82 chr2 167944762 167944917 -82742937 + MLT1E LTR MaLR 399 581 0 1372 116 14 5 chr2 167945079 167945294 -82742560 + AluSp SINE Alu 96 312 -1 506 234 101 57 chr2 167945405 167945653 -82742201 + L1MC5 LINE L1 5353 5611 -2197 421 316 168 40 chr2 167945654 167946053 -82741801 + MLT1J2 LTR MaLR 1 450 0 237 302 49 58 chr2 167946057 167946262 -82741592 + L1MC5 LINE L1 5613 5815 -1993 6220 181 34 18 chr2 167946269 167948386 -82739468 + L1MC1 LINE L1 4180 6333 0 21 36 0 0 chr2 167948503 167948531 -82739323 + AT_rich Low_complexity Low_complexity 1 28 0 468 0 0 0 chr2 167948536 167948588 -82739266 + (CA)n Simple_repeat Simple_repeat 1 52 0 2036 230 45 69 chr2 167948634 167949464 -82738390 + L1MC5 LINE L1 6688 7497 -464 221 217 0 29 chr2 167949481 167949550 -82738304 + GA-rich Low_complexity Low_complexity 6 72 0 626 201 64 61 chr2 167949580 167949844 -82738010 + L1MC5 LINE L1 7511 7775 -186 730 263 22 22 chr2 167950364 167950592 -82737262 + L2 LINE L2 2207 2434 -880 851 242 6 6 chr2 167950597 167950775 -82737079 + MIR SINE MIR 12 189 -73 1192 269 114 22 chr2 167950842 167951573 -82736281 + L2 LINE L2 2428 3231 -82 326 253 112 46 chr2 167952401 167952642 -82735212 + L1ME4a LINE L1 5614 5870 -251 830 323 134 19 chr2 167953178 167953736 -82734118 + L2 LINE L2 2694 3310 -3 260 389 75 24 chr2 167954897 167955149 -82732705 + L2 LINE L2 2200 2464 -850 204 312 8 88 chr2 167955581 167955706 -82732148 + L2 LINE L2 2945 3059 -213 315 154 0 0 chr2 167955737 167955789 -82732065 + MIR SINE MIR 211 262 0 285 253 24 12 chr2 167955973 167956056 -82731798 + GA-rich Low_complexity Low_complexity 4 87 0 21 0 0 0 chr2 167956472 167956493 -82731361 + AT_rich Low_complexity Low_complexity 1 21 0 1308 187 84 30 chr2 167956559 167956809 -82731045 - Charlie5 DNA MER1_type -2 2622 2344 2238 74 0 45 chr2 167956809 167957120 -82730734 + AluY SINE Alu 1 297 -14 1308 187 84 30 chr2 167957120 167957238 -82730616 - Charlie5 DNA MER1_type -280 2344 2234 268 96 0 0 chr2 167957246 167957298 -82730556 - Charlie5 DNA MER1_type -2490 122 71 1884 94 23 23 chr2 167957321 167957586 -82730268 + AluSq SINE Alu 1 265 -48 231 36 0 0 chr2 167957931 167957959 -82729895 + (TA)n Simple_repeat Simple_repeat 2 29 0 721 160 15 8 chr2 167959486 167959617 -82728237 - FLAM_C SINE Alu 0 133 2 1850 128 48 3 chr2 167961380 167961669 -82726185 - AluSx SINE Alu -7 305 4 210 284 81 14 chr2 167962075 167962149 -82725705 + MIR SINE MIR 117 195 -67 385 257 53 58 chr2 167962418 167962589 -82725265 - L2 LINE L2 -2 3311 3142 1326 199 111 0 chr2 167962911 167963218 -82724636 + MER58B DNA MER1_type 1 341 0 648 265 54 15 chr2 167963507 167963711 -82724143 + L2 LINE L2 3102 3313 0 370 254 109 0 chr2 167963732 167963842 -82724012 + L2 LINE L2 3190 3311 -2 237 178 0 0 chr2 167964405 167964450 -82723404 + (CCCG)n Simple_repeat Simple_repeat 3 47 0 205 258 96 21 chr2 167966465 167966555 -82721299 + MIR SINE MIR 44 140 -68 1454 163 34 90 chr2 167966649 167967006 -82720848 - MER1B DNA MER1_type 0 337 1 4206 154 42 27 chr2 167967167 167968388 -82719466 - pTR5 LTR ERV1 -259 1683 31 423 318 127 0 chr2 167968394 167968567 -82719287 + MIR SINE MIR 67 261 -1 976 239 141 11 chr2 167968998 167969353 -82718501 + MER57A LTR ERV1 3 403 0 184 342 66 13 chr2 167969464 167969540 -82718314 + MIR SINE MIR 36 115 -93 2083 131 3 0 chr2 167969556 167969846 -82718008 + AluSx SINE Alu 1 291 -21 12951 190 36 46 chr2 167969850 167972015 -82715839 - L1MA4 LINE L1 -7 7712 5527 2352 79 0 0 chr2 167972015 167972307 -82715547 + AluY SINE Alu 1 292 -19 12951 190 36 46 chr2 167972307 167972471 -82715383 - L1MA4 LINE L1 -2192 5527 5363 1455 84 0 5 chr2 167972471 167972662 -82715192 - AluSg/x SINE Alu -5 307 118 12951 190 36 46 chr2 167972662 167973801 -82714053 - L1MA4 LINE L1 -2356 5363 4214 824 240 0 28 chr2 167973801 167973980 -82713874 - FRAM SINE Alu -3 173 1 12951 190 36 46 chr2 167973980 167976101 -82711753 - L1MA4 LINE L1 -3505 4214 2008 2185 62 0 18 chr2 167976150 167976425 -82711429 - AluY SINE Alu -41 270 1 239 186 62 78 chr2 167976605 167976734 -82711120 - L1MC4 LINE L1 -2 8040 7914 935 211 45 0 chr2 167976802 167977001 -82710853 - MER3 DNA MER1_type 0 209 2 2691 85 0 25 chr2 167977363 167977539 -82710315 + THE1A LTR MaLR 1 165 -190 2235 83 0 13 chr2 167977539 167977839 -82710015 - AluY SINE Alu -1 310 15 2691 85 0 25 chr2 167977839 167978026 -82709828 + THE1A LTR MaLR 165 355 0 11373 100 12 1 chr2 167978026 167979588 -82708266 + THE1A-int LTR MaLR 1 1580 0 2536 105 3 0 chr2 167979589 167979942 -82707912 + THE1A LTR MaLR 2 355 0 256 154 0 0 chr2 167980225 167980264 -82707590 - MER5A DNA MER1_type 0 189 151 235 237 66 0 chr2 167980264 167980340 -82707514 - L1MA8 LINE L1 -142 6149 6069 631 174 28 0 chr2 167980342 167980486 -82707368 + L1MA8 LINE L1 6140 6287 -4 897 177 6 24 chr2 167980520 167980684 -82707170 - MER5A DNA MER1_type -28 161 1 6130 188 32 16 chr2 167981041 167982249 -82705605 + L1M3f LINE L1 1 1228 -4100 26062 109 16 19 chr2 167982258 167988695 -82699159 + L1PA8 LINE L1 1 6415 -72 1953 172 42 0 chr2 167988677 167989437 -82698417 + L1MA4 LINE L1 5429 6295 -5 * 265 283 38 57 chr2 167989884 167989990 -82697864 - MIR3 SINE MIR -17 191 88 1779 198 17 6 chr2 167990443 167990802 -82697052 + MLT1A1 LTR MaLR 3 365 0 831 122 0 36 chr2 167990802 167990941 -82696913 + MLT1A1-int LTR MaLR 1 134 -1601 294 277 50 0 chr2 167991062 167991163 -82696691 - L3b LINE CR1 -335 1248 1143 460 226 29 0 chr2 167992055 167992157 -82695697 - MER94 DNA DNA -4 130 26 3549 129 17 72 chr2 167992430 167992815 -82695039 - L1PB3 LINE L1 -1 6153 5823 1361 96 5 10 chr2 167992815 167993013 -82694841 - MER107 DNA MER1_type 0 197 1 3549 129 17 72 chr2 167993013 167993339 -82694515 - L1PB3 LINE L1 -331 5823 5481 647 256 175 19 chr2 167993636 167993847 -82694007 - MIR SINE MIR -6 256 13 2162 120 0 0 chr2 167993924 167994224 -82693630 + AluSx SINE Alu 1 300 -12 1861 119 30 10 chr2 167994584 167994887 -82692967 + AluSc SINE Alu 1 309 0 23 33 0 0 chr2 167995349 167995379 -82692475 + AT_rich Low_complexity Low_complexity 1 30 0 476 194 5 43 chr2 167996039 167996225 -82691629 + GA-rich Low_complexity Low_complexity 2 180 0 203 300 0 0 chr2 167997493 167997553 -82690301 + (CATA)n Simple_repeat Simple_repeat 4 63 0 3274 214 95 22 chr2 167997561 167998504 -82689350 - L1MC4 LINE L1 -142 7900 6889 1317 276 109 11 chr2 167999084 167999552 -82688302 - LTR33 LTR ERVL -7 514 1 360 0 0 0 chr2 167999792 167999832 -82688022 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr2 168000283 168000304 -82687550 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 168001986 168002014 -82685840 + AT_rich Low_complexity Low_complexity 1 28 0 30 59 0 0 chr2 168003310 168003361 -82684493 + AT_rich Low_complexity Low_complexity 1 51 0 279 0 0 0 chr2 168003944 168003975 -82683879 + (TG)n Simple_repeat Simple_repeat 1 31 0 252 305 128 20 chr2 168004433 168004636 -82683218 + L2 LINE L2 2129 2353 -961 258 254 0 0 chr2 168004773 168004836 -82683018 + L1ME4a LINE L1 5967 6029 -92 279 0 0 0 chr2 168005414 168005445 -82682409 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 227 364 63 28 chr2 168007036 168007179 -82680675 - MIR SINE MIR -55 207 60 240 276 0 0 chr2 168007591 168007667 -82680187 + L1P LINE L1 5323 5398 -756 237 254 36 18 chr2 168007929 168008039 -82679815 + L1ME LINE L1 5682 5793 -328 33 25 0 0 chr2 168009232 168009272 -82678582 + AT_rich Low_complexity Low_complexity 1 40 0 776 162 0 21 chr2 168011905 168012047 -82675807 - FLAM_C SINE Alu 0 143 5 23 33 0 0 chr2 168012458 168012488 -82675366 + AT_rich Low_complexity Low_complexity 1 30 0 428 56 14 14 chr2 168012643 168012715 -82675139 - AluSp/q SINE Alu -4 309 238 32 67 0 0 chr2 168013948 168014008 -82673846 + AT_rich Low_complexity Low_complexity 1 60 0 263 356 19 0 chr2 168015675 168015779 -82672075 - MIR3 SINE MIR 0 208 103 229 97 0 0 chr2 168019275 168019306 -82668548 - L1ME4a LINE L1 -104 6017 5987 23 0 0 0 chr2 168019603 168019626 -82668228 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr2 168023378 168023401 -82664453 + (T)n Simple_repeat Simple_repeat 1 23 0 204 194 0 0 chr2 168023802 168023838 -82664016 + CT-rich Low_complexity Low_complexity 2 37 0 23 68 0 0 chr2 168023885 168023929 -82663925 + AT_rich Low_complexity Low_complexity 1 44 0 240 256 0 0 chr2 168025447 168025533 -82662321 + GA-rich Low_complexity Low_complexity 3 88 0 238 264 0 42 chr2 168026776 168026848 -82661006 + GA-rich Low_complexity Low_complexity 3 71 0 184 222 0 0 chr2 168027433 168027478 -82660376 - L2 LINE L2 0 3313 3269 2482 60 0 0 chr2 168030675 168030975 -82656879 - AluY SINE Alu -11 300 1 22 35 0 0 chr2 168032692 168032721 -82655133 + AT_rich Low_complexity Low_complexity 1 29 0 511 269 0 0 chr2 168032734 168032842 -82655012 + FLAM_A SINE Alu 21 128 -14 864 216 6 6 chr2 168033318 168033480 -82654374 + MLT1E LTR MaLR 1 162 -431 305 315 138 0 chr2 168034159 168034289 -82653565 + MIR3 SINE MIR 56 203 -5 776 155 64 112 chr2 168034487 168034551 -82653303 + AluJo SINE Alu 83 149 -163 2311 78 3 3 chr2 168034551 168034845 -82653009 - AluSq SINE Alu -19 294 1 776 155 64 112 chr2 168034845 168034998 -82652856 + AluJo SINE Alu 149 285 -27 238 65 0 0 chr2 168034998 168035029 -82652825 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 209 167 21 21 chr2 168035252 168035300 -82652554 + T-rich Low_complexity Low_complexity 2 49 0 1727 154 35 0 chr2 168035436 168035721 -82652133 - AluJb SINE Alu -15 297 3 1419 211 176 82 chr2 168035828 168036426 -82651428 - MLT1E1 LTR MaLR 0 654 1 351 314 58 11 chr2 168036722 168036913 -82650941 - L1M4 LINE L1 -3261 2885 2686 2170 70 0 0 chr2 168037441 168037712 -82650142 - AluY SINE Alu 0 311 41 268 178 27 0 chr2 168038334 168038407 -82649447 + (TA)n Simple_repeat Simple_repeat 2 76 0 352 326 108 15 chr2 168039265 168039427 -82648427 + MIR SINE MIR 35 214 -48 405 329 89 50 chr2 168039525 168039805 -82648049 - L2 LINE L2 -37 3235 2945 290 339 116 16 chr2 168039852 168040162 -82647692 - L2 LINE L2 -424 2890 2550 413 299 120 34 chr2 168040926 168041160 -82646694 + MIR SINE MIR 7 260 -2 26 0 0 0 chr2 168041300 168041326 -82646528 + AT_rich Low_complexity Low_complexity 1 26 0 195 273 71 50 chr2 168041392 168041491 -82646363 - MIR SINE MIR -74 188 88 225 254 0 51 chr2 168041545 168041604 -82646250 - L2 LINE L2 -14 3258 3203 508 284 123 19 chr2 168042477 168042688 -82645166 - MIR SINE MIR 0 262 30 303 28 0 0 chr2 168042969 168043005 -82644849 + (CA)n Simple_repeat Simple_repeat 1 36 0 230 328 75 46 chr2 168043434 168043608 -82644246 + L3 LINE CR1 792 970 -607 463 94 0 0 chr2 168044199 168044263 -82643591 + Alu SINE Alu 1 64 -247 1382 200 20 83 chr2 168045415 168045810 -82642044 + MLT1A2 LTR MaLR 1 370 -4 322 284 163 7 chr2 168045915 168046057 -82641797 + MIR SINE MIR 30 189 -66 1254 186 8 0 chr2 168046282 168046518 -82641336 - Tigger5 DNA MER2_type -1 2322 2085 * 1282 181 12 52 chr2 168046508 168046756 -82641098 - Tigger5 DNA MER2_type -2085 238 1 203 161 0 0 chr2 168046756 168046787 -82641067 + (TATATG)n Simple_repeat Simple_repeat 4 34 0 252 368 75 17 chr2 168047413 168047587 -82640267 + MIR3 SINE MIR 14 197 -11 709 12 0 0 chr2 168048425 168048510 -82639344 - L1PA2 LINE L1 -4 6151 6067 1819 140 51 0 chr2 168049114 168049407 -82638447 - AluSx SINE Alu -4 308 1 487 341 24 12 chr2 168050511 168050681 -82637173 - MIR SINE MIR -50 212 41 2502 46 20 0 chr2 168050682 168050987 -82636867 - AluY SINE Alu 0 311 1 27 29 0 0 chr2 168053419 168053453 -82634401 + AT_rich Low_complexity Low_complexity 1 34 0 231 36 0 0 chr2 168055061 168055089 -82632765 + (CA)n Simple_repeat Simple_repeat 2 29 0 180 324 88 60 chr2 168055432 168055614 -82632240 - MIR3 SINE MIR -1 207 21 3596 74 12 2 chr2 168058964 168059449 -82628405 - L1PA12 LINE L1 0 6168 5679 203 267 0 0 chr2 168059596 168059641 -82628213 + (CATA)n Simple_repeat Simple_repeat 2 46 0 27 29 0 0 chr2 168061043 168061077 -82626777 + AT_rich Low_complexity Low_complexity 1 34 0 200 200 22 22 chr2 168061121 168061166 -82626688 - MIR3 SINE MIR -7 201 157 953 133 20 13 chr2 168061355 168061376 -82626478 - AluJo SINE Alu -161 151 132 333 68 0 0 chr2 168061376 168061420 -82626434 + (TA)n Simple_repeat Simple_repeat 2 45 0 953 133 20 13 chr2 168061420 168061548 -82626306 - AluJo SINE Alu -180 132 1 25 31 0 0 chr2 168062099 168062131 -82625723 + AT_rich Low_complexity Low_complexity 1 32 0 1169 86 40 0 chr2 168062298 168062472 -82625382 - L1MA2 LINE L1 0 6304 6124 217 321 0 24 chr2 168064754 168064838 -82623016 + GA-rich Low_complexity Low_complexity 2 83 0 22 35 0 0 chr2 168064867 168064896 -82622958 + AT_rich Low_complexity Low_complexity 1 29 0 207 167 0 0 chr2 168065115 168065157 -82622697 + (TG)n Simple_repeat Simple_repeat 1 42 0 23 33 0 0 chr2 168066216 168066246 -82621608 + AT_rich Low_complexity Low_complexity 1 30 0 346 127 113 0 chr2 168066350 168066421 -82621433 - MADE1 DNA Mariner -1 79 1 456 270 32 8 chr2 168067388 168067514 -82620340 + MIR SINE MIR 92 220 -42 406 263 10 101 chr2 168067895 168068093 -82619761 + MIR SINE MIR 78 257 -5 212 301 60 12 chr2 168068103 168068186 -82619668 - MIR3 SINE MIR -5 203 117 21 0 0 0 chr2 168069123 168069144 -82618710 + AT_rich Low_complexity Low_complexity 1 21 0 498 246 95 0 chr2 168070722 168070901 -82616953 + MER5C DNA MER1_type 56 251 -73 2122 103 0 39 chr2 168071345 168071657 -82616197 + AluSq SINE Alu 1 300 -13 21 0 0 0 chr2 168071700 168071721 -82616133 + AT_rich Low_complexity Low_complexity 1 21 0 1975 130 36 0 chr2 168072149 168072479 -82615375 + L1MA5A LINE L1 5953 6294 -3 820 178 145 79 chr2 168074400 168074704 -82613150 - MER33 DNA MER1_type 0 324 1 519 314 51 0 chr2 168074903 168075059 -82612795 + MIR SINE MIR 17 180 -82 290 333 111 29 chr2 168075234 168075441 -82612413 - L3 LINE CR1 -1167 410 187 293 265 72 54 chr2 168076586 168076752 -82611102 - Charlie8 DNA MER1_type -2238 179 11 365 253 122 46 chr2 168077086 168077254 -82610600 + MIR SINE MIR 31 214 -48 306 348 60 22 chr2 168077549 168077733 -82610121 + L2 LINE L2 2671 2861 -453 227 303 157 0 chr2 168077770 168077859 -82609995 + L2 LINE L2 2942 3044 -228 24 32 0 0 chr2 168078049 168078080 -82609774 + AT_rich Low_complexity Low_complexity 1 31 0 782 277 60 78 chr2 168078479 168078926 -82608928 + MLT1K LTR MaLR 13 451 -137 184 239 0 60 chr2 168080448 168080515 -82607339 - L2 LINE L2 -1606 1708 1646 229 333 0 0 chr2 168081113 168081176 -82606678 - U1 snRNA snRNA -96 69 7 2370 75 0 0 chr2 168082379 168082685 -82605169 + AluY SINE Alu 1 306 -5 288 77 0 0 chr2 168083553 168083592 -82604262 + (TTCC)n Simple_repeat Simple_repeat 1 39 0 2024 101 10 16 chr2 168083601 168083909 -82603945 - AluSc SINE Alu -3 306 1 1144 309 44 19 chr2 168086182 168086755 -82601099 - L1MC4a LINE L1 -1887 5921 5335 2168 256 12 2 chr2 168087152 168087731 -82600123 + L1MC1 LINE L1 4479 5063 -1083 871 137 6 48 chr2 168087754 168087922 -82599932 - L1M3f LINE L1 -5165 163 3 * 4661 141 10 10 chr2 168087920 168088991 -82598863 + L1MC1 LINE L1 5077 7663 -122 613 187 97 8 chr2 168089205 168089339 -82598515 + L1MC1 LINE L1 6187 6332 -1 385 340 64 10 chr2 168089411 168089614 -82598240 + L1M4 LINE L1 4487 4700 -1446 301 310 70 36 chr2 168089628 168090245 -82597609 - L1M4 LINE L1 -3243 2903 2266 22 0 0 0 chr2 168090560 168090582 -82597272 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr2 168090701 168090739 -82597115 + AT_rich Low_complexity Low_complexity 1 38 0 254 367 0 13 chr2 168093046 168093125 -82594729 - MIR SINE MIR -104 104 27 2217 189 60 9 chr2 168095511 168095946 -82591908 + LTR32 LTR ERVL 15 471 0 4350 142 54 0 chr2 168096811 168097492 -82590362 + MER72 LTR ERV1 5 722 0 2135 148 30 50 chr2 168097754 168097956 -82589898 + MSTB1 LTR MaLR 1 206 -226 2013 117 3 27 chr2 168097956 168098255 -82589599 + AluSp SINE Alu 1 292 -21 2135 148 30 50 chr2 168098255 168098491 -82589363 + MSTB1 LTR MaLR 206 430 -2 183 309 29 0 chr2 168098512 168098580 -82589274 - L2 LINE L2 -1 3312 3243 318 26 0 0 chr2 168098820 168098859 -82588995 + (TG)n Simple_repeat Simple_repeat 2 40 0 715 198 43 32 chr2 168099706 168099791 -82588063 - MER53 DNA DNA 0 189 106 1517 71 28 5 chr2 168099791 168100003 -82587851 - L1PA7 LINE L1 0 6154 5938 715 198 43 32 chr2 168100003 168100104 -82587750 - MER53 DNA DNA -83 106 1 204 40 0 0 chr2 168100778 168100803 -82587051 + (TTCC)n Simple_repeat Simple_repeat 1 25 0 1613 190 30 0 chr2 168100803 168101103 -82586751 - AluJo SINE Alu -2 310 2 205 200 80 0 chr2 168102604 168102654 -82585200 + L2 LINE L2 3219 3272 0 444 264 35 58 chr2 168102967 168103141 -82584713 - MER5A DNA MER1_type -19 170 1 682 212 7 7 chr2 168103300 168103437 -82584417 - AluJo SINE Alu -173 139 3 250 403 7 19 chr2 168103496 168103650 -82584204 + MIR SINE MIR 19 170 -92 2257 94 0 16 chr2 168104108 168104416 -82583438 - AluY SINE Alu -8 303 1 463 324 61 24 chr2 168105844 168106091 -82581763 - L3b LINE CR1 -224 1359 1104 2237 91 3 0 chr2 168107057 168107353 -82580501 - AluSg SINE Alu -13 297 1 1583 161 4 4 chr2 168107784 168108057 -82579797 - AluSx SINE Alu -1 311 39 1501 200 11 7 chr2 168108374 168108654 -82579200 - AluJo SINE Alu -31 281 1 7997 174 20 11 chr2 168108811 168109914 -82577940 + L1PA16 LINE L1 3659 4750 -1416 13576 23 5 0 chr2 168109914 168112296 -82575558 + L1PA2 LINE L1 3768 6155 0 7997 174 20 11 chr2 168112296 168112988 -82574866 + L1PA16 LINE L1 4750 5479 -687 2383 76 0 16 chr2 168112988 168113304 -82574550 + AluY SINE Alu 1 311 0 7997 174 20 11 chr2 168113304 168113684 -82574170 + L1PA16 LINE L1 5479 5854 -312 2029 114 0 0 chr2 168113942 168114269 -82573585 + AluSx SINE Alu 1 327 0 192 227 23 0 chr2 168114614 168114658 -82573196 - MIR SINE MIR -108 154 110 188 254 127 0 chr2 168114768 168114831 -82573023 + L2 LINE L2 3201 3271 -1 268 328 81 11 chr2 168115048 168115234 -82572620 - L2 LINE L2 -1293 2021 1823 1834 169 3 0 chr2 168115234 168115530 -82572324 + AluJb SINE Alu 1 297 -15 341 165 111 128 chr2 168116643 168116679 -82571175 - LTR41 LTR ERVL -1 794 759 2420 71 0 0 chr2 168116679 168116988 -82570866 + AluY SINE Alu 1 309 -2 341 165 111 128 chr2 168116988 168117183 -82570671 - LTR41 LTR ERVL -36 759 544 588 247 60 0 chr2 168117577 168117743 -82570111 - LTR41 LTR ERVL -595 178 3 248 235 0 0 chr2 168118034 168118085 -82569769 - LTR11 LTR ERV -207 477 427 4027 206 25 23 chr2 168118459 168119695 -82568159 + L1MB7 LINE L1 4867 6117 -67 5875 120 21 41 chr2 168120218 168120638 -82567216 + Tigger1 DNA MER2_type 1 428 -1990 1563 121 29 77 chr2 168120638 168120951 -82566903 + L1MA3 LINE L1 6008 6305 0 5875 120 21 41 chr2 168120951 168121490 -82566364 + Tigger1 DNA MER2_type 428 941 -1477 2750 93 0 8 chr2 168121490 168121857 -82565997 + THE1B LTR MaLR 1 364 0 10163 111 10 5 chr2 168121857 168123331 -82564523 + Tigger1 DNA MER2_type 938 2418 0 336 193 0 102 chr2 168123331 168123417 -82564437 + MER21B LTR ERV1 20 96 -767 1647 208 339 9 chr2 168123419 168123962 -82563892 + MER21B LTR ERV1 18 739 -124 231 36 0 0 chr2 168123982 168124010 -82563844 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 191 158 26 0 chr2 168124122 168124160 -82563694 + L2 LINE L2 3273 3311 -2 751 256 6 0 chr2 168124469 168124649 -82563205 + L1PB4 LINE L1 5969 6149 -7 24 32 0 0 chr2 168124649 168124680 -82563174 + AT_rich Low_complexity Low_complexity 1 31 0 240 245 101 14 chr2 168125446 168125585 -82562269 + L1ME LINE L1 5722 5872 -249 1925 133 27 13 chr2 168125857 168126157 -82561697 + AluSq SINE Alu 1 304 -9 22 35 0 0 chr2 168126352 168126381 -82561473 + AT_rich Low_complexity Low_complexity 1 29 0 497 242 69 17 chr2 168127447 168127678 -82560176 - Charlie1a DNA MER1_type -12 1443 1201 * 3066 221 70 12 chr2 168127676 168128210 -82559644 - Charlie1a DNA MER1_type -1955 806 213 201 74 0 0 chr2 168128210 168128237 -82559617 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3066 221 70 12 chr2 168128237 168128464 -82559390 - Charlie1a DNA MER1_type -2548 213 1 1846 89 124 0 chr2 168128488 168128747 -82559107 + AluSg SINE Alu 1 291 -19 183 100 0 0 chr2 168128918 168128948 -82558906 + (GA)n Simple_repeat Simple_repeat 2 31 0 440 84 0 0 chr2 168129076 168129147 -82558707 - Alu SINE Alu -2 310 240 442 89 0 63 chr2 168129669 168129748 -82558106 - MER1B DNA MER1_type -1 332 259 1617 112 0 0 chr2 168129750 168129973 -82557881 - MER1B DNA MER1_type -73 224 2 23 33 0 0 chr2 168130777 168130807 -82557047 + AT_rich Low_complexity Low_complexity 1 30 0 442 285 116 26 chr2 168131060 168131362 -82556492 - L1ME4a LINE L1 -69 6052 5724 2209 110 0 28 chr2 168131370 168131689 -82556165 - AluSx SINE Alu -2 310 1 258 105 0 0 chr2 168131883 168131921 -82555933 + (A)n Simple_repeat Simple_repeat 1 38 0 283 233 35 12 chr2 168132055 168132141 -82555713 + LTR67 LTR ERVL 445 532 -25 1773 193 37 5 chr2 168132548 168132926 -82554928 + MLT1B LTR MaLR 1 390 0 1282 228 11 15 chr2 168133369 168133723 -82554131 + L1M4 LINE L1 4860 5205 -941 342 0 0 0 chr2 168133997 168134035 -82553819 + (A)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr2 168134241 168134264 -82553590 + AT_rich Low_complexity Low_complexity 1 23 0 659 124 0 9 chr2 168134269 168134374 -82553480 - HY1 scRNA scRNA -6 106 3 297 323 132 45 chr2 168134670 168134980 -82552874 + L2 LINE L2 2926 3262 -51 22 0 0 0 chr2 168135014 168135036 -82552818 + AT_rich Low_complexity Low_complexity 1 22 0 1986 118 7 0 chr2 168135041 168135351 -82552503 + AluSx SINE Alu 1 312 0 778 211 106 29 chr2 168135513 168135721 -82552133 + MIR SINE MIR 18 241 -21 196 264 38 0 chr2 168135688 168135741 -82552113 + L2 LINE L2 3254 3308 -5 * 244 118 20 20 chr2 168138360 168138411 -82549443 + GA-rich Low_complexity Low_complexity 2 52 0 249 146 0 0 chr2 168138696 168138744 -82549110 + (CA)n Simple_repeat Simple_repeat 2 49 0 200 317 108 25 chr2 168139917 168140037 -82547817 - MIR SINE MIR -105 157 28 367 304 54 0 chr2 168141043 168141155 -82546699 - L2 LINE L2 -1 3312 3195 21 0 0 0 chr2 168143536 168143557 -82544297 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 168143796 168143829 -82544025 + AT_rich Low_complexity Low_complexity 1 33 0 513 206 16 32 chr2 168144921 168145047 -82542807 - MIR3 SINE MIR -9 199 76 181 286 0 0 chr2 168148085 168148120 -82539734 + L2 LINE L2 3247 3281 -32 2224 141 8 19 chr2 168148124 168148487 -82539367 + THE1B LTR MaLR 1 359 -5 11709 94 13 0 chr2 168148491 168150051 -82537803 + THE1B-int LTR MaLR 1 1580 0 2053 122 9 28 chr2 168150051 168150377 -82537477 + THE1B LTR MaLR 1 320 -44 1332 131 60 33 chr2 168150377 168150672 -82537182 - THE1B LTR MaLR 0 375 1 653 272 14 42 chr2 168150773 168150990 -82536864 - MIR SINE MIR -49 213 3 553 216 161 12 chr2 168151643 168151805 -82536049 + MER5A DNA MER1_type 4 189 0 22 35 0 0 chr2 168152142 168152171 -82535683 + AT_rich Low_complexity Low_complexity 1 29 0 772 167 0 0 chr2 168152185 168152305 -82535549 + FLAM_C SINE Alu 3 122 -21 408 313 15 79 chr2 168152429 168152694 -82535160 - L1MC/D LINE L1 -2020 5788 5541 2289 136 28 0 chr2 168153489 168153843 -82534011 + THE1B LTR MaLR 1 364 0 2551 54 0 0 chr2 168153943 168154240 -82533614 - AluY SINE Alu -14 297 1 184 239 43 0 chr2 168154981 168155027 -82532827 - L2 LINE L2 -4 3268 3221 182 257 114 38 chr2 168155139 168155244 -82532610 + MIR SINE MIR 93 205 -57 218 343 14 0 chr2 168155540 168155610 -82532244 + MIR SINE MIR 111 181 -81 1714 86 64 4 chr2 168155628 168155861 -82531993 - AluSg SINE Alu -14 296 50 239 288 34 0 chr2 168155861 168155920 -82531934 - MER5A DNA MER1_type -125 64 4 234 346 28 9 chr2 168156377 168156484 -82531370 + MIR SINE MIR 81 189 -73 326 205 26 39 chr2 168156787 168157020 -82530834 + (TA)n Simple_repeat Simple_repeat 1 229 0 437 181 11 44 chr2 168157101 168157283 -82530571 + (TA)n Simple_repeat Simple_repeat 1 176 0 1868 189 58 19 chr2 168158827 168159239 -82528615 + MSTC LTR MaLR 1 428 0 221 271 0 0 chr2 168159365 168159424 -82528430 + (TA)n Simple_repeat Simple_repeat 1 59 0 580 255 37 37 chr2 168159523 168159711 -82528143 - MER5A DNA MER1_type -1 188 1 29 60 0 0 chr2 168160077 168160127 -82527727 + AT_rich Low_complexity Low_complexity 1 50 0 2302 82 0 7 chr2 168160489 168160781 -82527073 - AluSx SINE Alu -22 290 1 38 61 0 0 chr2 168161207 168161273 -82526581 + AT_rich Low_complexity Low_complexity 1 66 0 21 57 0 0 chr2 168161473 168161508 -82526346 + AT_rich Low_complexity Low_complexity 1 35 0 188 284 60 15 chr2 168162771 168162838 -82525016 + L2 LINE L2 3201 3270 -2 649 60 0 0 chr2 168163217 168163300 -82524554 + AluSg/x SINE Alu 217 299 -11 425 259 127 0 chr2 168164127 168164320 -82523534 + MIR SINE MIR 45 260 -2 653 59 0 0 chr2 168164321 168164406 -82523448 - L1PA14 LINE L1 -1 6160 6076 1728 236 26 14 chr2 168164790 168165210 -82522644 + LTR40c LTR ERVL 36 460 -5 1652 191 11 31 chr2 168165893 168166244 -82521610 + MER65C LTR ERV1 1 344 -117 486 182 66 41 chr2 168166214 168166335 -82521519 + LTR51 LTR ERV1 548 671 0 * 206 333 13 0 chr2 168166343 168166418 -82521436 + L2 LINE L2 3187 3262 -10 24 32 0 0 chr2 168166754 168166785 -82521069 + AT_rich Low_complexity Low_complexity 1 31 0 471 320 83 52 chr2 168167697 168168119 -82519735 - L2 LINE L2 -431 2883 2449 790 240 148 4 chr2 168168411 168168661 -82519193 - MER63C DNA MER1_type 0 931 646 2418 237 54 8 chr2 168168774 168169445 -82518409 - MER63C DNA MER1_type -227 703 2 824 125 16 99 chr2 168171276 168171468 -82516386 - AluJb SINE Alu 0 312 137 215 225 0 0 chr2 168171661 168171701 -82516153 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr2 168172147 168172168 -82515686 + AT_rich Low_complexity Low_complexity 1 21 0 773 221 56 28 chr2 168172573 168172786 -82515068 + MER20 DNA MER1_type 1 219 0 226 309 25 12 chr2 168172786 168172867 -82514987 - MIR3 SINE MIR -48 160 79 1043 186 0 21 chr2 168173139 168173332 -82514522 - MER5A DNA MER1_type 0 189 1 24 32 0 0 chr2 168173524 168173555 -82514299 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 168176307 168176335 -82511519 + AT_rich Low_complexity Low_complexity 1 28 0 274 320 139 0 chr2 168176485 168176657 -82511197 - MIR3 SINE MIR -9 199 4 257 247 123 0 chr2 168177107 168177188 -82510666 + L2 LINE L2 3223 3313 0 506 272 91 87 chr2 168177399 168177859 -82509995 - MLT1J LTR MaLR 0 511 50 531 277 64 62 chr2 168179080 168179485 -82508369 - MLT1J2 LTR MaLR 0 450 4 1514 198 7 11 chr2 168179930 168180213 -82507641 + AluJo SINE Alu 1 282 -30 321 274 54 54 chr2 168180272 168180440 -82507414 - MLT1J LTR MaLR -343 168 1 186 43 0 0 chr2 168180553 168180576 -82507278 + (CA)n Simple_repeat Simple_repeat 2 24 0 * 234 0 0 0 chr2 168180575 168180601 -82507253 + (GA)n Simple_repeat Simple_repeat 2 27 0 426 151 0 0 chr2 168181159 168181232 -82506622 + GA-rich Low_complexity Low_complexity 2 74 0 221 305 49 49 chr2 168182286 168182368 -82505486 + L2 LINE L2 3208 3289 -24 21 0 0 0 chr2 168182652 168182673 -82505181 + AT_rich Low_complexity Low_complexity 1 21 0 359 333 34 0 chr2 168183492 168183609 -82504245 - MIR3 SINE MIR -50 158 38 2423 155 24 9 chr2 168183926 168184351 -82503503 + MSTB1 LTR MaLR 2 432 0 209 294 176 0 chr2 168185343 168185445 -82502409 + MIR SINE MIR 137 256 -6 294 309 88 28 chr2 168187979 168188160 -82499694 + MIR SINE MIR 6 197 -65 499 360 71 44 chr2 168188295 168188842 -82499012 + L2 LINE L2 2140 2701 -613 2387 69 10 3 chr2 168188842 168189216 -82498638 - AluY SINE Alu 0 376 1 826 279 29 85 chr2 168189396 168189772 -82498082 + LTR16A LTR ERVL 81 435 -15 478 326 157 47 chr2 168189837 168190220 -82497634 + L2 LINE L2 2847 3271 -1 366 314 29 21 chr2 168190906 168191046 -82496808 - LTR16A1 LTR ERVL -304 153 13 1877 164 121 44 chr2 168191134 168191615 -82496239 - MLT2B1 LTR ERVL 0 520 3 246 194 15 30 chr2 168193046 168193113 -82494741 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 22 0 0 0 chr2 168193156 168193178 -82494676 + AT_rich Low_complexity Low_complexity 1 22 0 210 269 119 0 chr2 168194189 168194256 -82493598 + L2 LINE L2 3225 3299 -14 263 260 77 39 chr2 168194343 168194447 -82493407 + L2 LINE L2 2557 2664 -650 4744 178 23 11 chr2 168194463 168196216 -82491638 + L1PA16 LINE L1 4137 5906 -260 234 150 0 0 chr2 168196319 168196359 -82491495 + (A)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr2 168196413 168196434 -82491420 + AT_rich Low_complexity Low_complexity 1 21 0 1819 93 0 0 chr2 168196688 168196913 -82490941 - AluSc SINE Alu -24 285 61 624 321 130 34 chr2 168197522 168197819 -82490035 + L2 LINE L2 2485 2752 -561 1860 172 3 10 chr2 168197819 168198127 -82489727 - AluSx SINE Alu -6 306 1 624 321 130 34 chr2 168198127 168198575 -82489279 + L2 LINE L2 2752 3312 -1 532 296 61 14 chr2 168199526 168199739 -82488115 - MIR SINE MIR -38 224 2 255 250 250 0 chr2 168199955 168200027 -82487827 - MER5A DNA MER1_type 0 189 100 350 362 25 6 chr2 168200178 168200341 -82487513 - L2 LINE L2 -968 2346 2181 270 260 73 31 chr2 168200741 168200837 -82487017 - MIR SINE MIR -71 137 38 30 0 0 0 chr2 168201364 168201394 -82486460 + AT_rich Low_complexity Low_complexity 1 30 0 1919 218 22 16 chr2 168203469 168204093 -82483761 + L1PA13 LINE L1 1534 2307 -4490 2018 140 6 3 chr2 168204093 168204407 -82483447 - MER1A DNA MER1_type 0 529 215 528 175 53 0 chr2 168204407 168204521 -82483333 + L1PA16 LINE L1 6047 6166 0 622 247 36 6 chr2 168204541 168204707 -82483147 + MER5B DNA MER1_type 5 175 -3 680 236 22 50 chr2 168204776 168204958 -82482896 + MER5A DNA MER1_type 13 189 0 193 310 184 0 chr2 168205480 168205567 -82482287 + MIR SINE MIR 32 134 -128 738 226 39 29 chr2 168205664 168205872 -82481982 - MER63A DNA MER1_type 0 210 1 949 300 57 57 chr2 168206222 168206762 -82481092 - L2 LINE L2 -61 3252 2705 2200 38 0 0 chr2 168206762 168207028 -82480826 - L1PA4 LINE L1 0 6155 5890 949 300 57 57 chr2 168207028 168207276 -82480578 - L2 LINE L2 -608 2705 2459 428 318 40 6 chr2 168207901 168208074 -82479780 + L1MEd LINE L1 325 503 -5869 909 206 70 50 chr2 168208095 168208416 -82479438 - L1ME3 LINE L1 -10 6160 5828 2030 118 0 14 chr2 168208549 168208838 -82479016 + AluSx SINE Alu 6 290 -22 901 172 0 0 chr2 168208869 168209003 -82478851 - FRAM SINE Alu -30 146 13 1159 240 39 18 chr2 168209015 168209398 -82478456 - L1ME3 LINE L1 -368 5794 5404 1164 27 60 0 chr2 168210594 168210744 -82477110 - L1PA4 LINE L1 -2 6153 5995 1719 19 5 0 chr2 168210744 168210950 -82476904 + L1PA4 LINE L1 5758 5964 -190 23 0 0 0 chr2 168210950 168210973 -82476881 + AT_rich Low_complexity Low_complexity 1 23 0 229 214 0 0 chr2 168211104 168211146 -82476708 + MER69 DNA AcHobo 2483 2524 -2 663 254 41 22 chr2 168212014 168212386 -82475468 + L1MEd LINE L1 2181 2561 -3821 777 277 11 0 chr2 168212397 168212574 -82475280 + MER8 DNA MER2_type 1 179 -60 4618 240 37 4 chr2 168212610 168213733 -82474121 + L1MEd LINE L1 2569 3744 -2638 387 60 0 0 chr2 168213733 168213783 -82474071 + (TAA)n Simple_repeat Simple_repeat 2 51 0 4618 240 37 4 chr2 168213783 168213984 -82473870 + L1MEd LINE L1 3744 3937 -2445 361 346 45 30 chr2 168213995 168214261 -82473593 + L1M3d LINE L1 2 271 -5620 671 322 103 26 chr2 168214419 168214770 -82473084 + L1M3de LINE L1 620 997 -5656 843 129 223 21 chr2 168214888 168215081 -82472773 + L1PA16 LINE L1 5933 6164 -2 516 310 86 102 chr2 168215118 168215640 -82472214 + L2 LINE L2 2765 3300 -13 296 284 29 10 chr2 168218784 168218886 -82468968 + LTR67 LTR ERVL 428 531 -26 209 33 33 0 chr2 168219157 168219187 -82468667 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 190 430 0 0 chr2 168220265 168220344 -82467510 - L2 LINE L2 -685 2629 2551 222 118 0 0 chr2 168220762 168220796 -82467058 + (T)n Simple_repeat Simple_repeat 1 34 0 381 95 0 0 chr2 168221437 168221500 -82466354 + (GA)n Simple_repeat Simple_repeat 2 64 0 264 186 194 48 chr2 168221630 168221754 -82466100 + L1ME4a LINE L1 5955 6096 -25 6469 131 19 6 chr2 168222303 168223370 -82464484 - L1MA2 LINE L1 0 6304 5225 1756 237 0 2 chr2 168223363 168223773 -82464081 + L1MA2 LINE L1 4809 5217 -929 * 234 244 78 56 chr2 168224777 168224867 -82462987 - MIR SINE MIR -133 129 38 544 243 27 181 chr2 168225123 168225493 -82462361 + L1MA8 LINE L1 -453 4294967155 -6524 470 164 0 0 chr2 168225493 168225566 -82462288 - 7SK RNA RNA 0 193 121 474 204 0 0 chr2 168225600 168225703 -82462151 - 7SK RNA RNA -58 135 33 241 338 0 0 chr2 168225734 168225814 -82462040 + L1PA12 LINE L1 2103 2182 -5399 370 112 94 65 chr2 168225974 168226144 -82461710 + (CTATA)n Simple_repeat Simple_repeat 1 175 0 * 580 118 27 72 chr2 168226062 168226396 -82461458 + (TATATG)n Simple_repeat Simple_repeat 1 319 0 1920 149 3 3 chr2 168226621 168226917 -82460937 + AluSx SINE Alu 1 296 -16 381 250 64 14 chr2 168226976 168227116 -82460738 + HAL1b LINE L1 1199 1345 -3 810 11 11 0 chr2 168227260 168227354 -82460500 + AluY SINE Alu 1 95 -216 1716 275 56 36 chr2 168227454 168227700 -82460154 + L1MA8 LINE L1 1146 1385 -4997 2002 128 3 13 chr2 168227700 168228004 -82459850 + AluSq SINE Alu 1 301 -12 1716 275 56 36 chr2 168228004 168228590 -82459264 + L1MA8 LINE L1 1385 2081 -4301 2442 11 0 4 chr2 168228698 168228969 -82458885 - AluY SINE Alu -41 270 1 11395 195 40 18 chr2 168229078 168232123 -82455731 + L1MA8 LINE L1 2844 6036 -367 484 54 0 163 chr2 168232123 168232215 -82455639 - MADE1 DNA Mariner 0 80 4 11395 195 40 18 chr2 168232215 168232592 -82455262 + L1MA8 LINE L1 6036 6403 0 259 236 24 73 chr2 168232600 168232723 -82455131 + L1MA7 LINE L1 5940 6056 -235 6399 89 8 3 chr2 168232724 168233898 -82453956 + L1PA12 LINE L1 4990 6167 -1 881 171 22 0 chr2 168233927 168234108 -82453746 + L1MA7 LINE L1 6106 6290 -1 1359 167 13 33 chr2 168234118 168234423 -82453431 + L1M2 LINE L1 3681 3979 -2167 1197 214 65 64 chr2 168234424 168234812 -82453042 + MSTD LTR MaLR 1 356 -8 5707 191 25 19 chr2 168234813 168235551 -82452303 + L1M2 LINE L1 3979 4647 -1499 1541 207 13 10 chr2 168235551 168235851 -82452003 - AluJo SINE Alu -9 303 3 5707 191 25 19 chr2 168235851 168236503 -82451351 + L1M2 LINE L1 4647 5294 -852 2150 112 7 3 chr2 168236503 168236798 -82451056 + AluSc SINE Alu 1 296 -13 2638 35 3 0 chr2 168236807 168237117 -82450737 + AluY SINE Alu 1 311 0 512 148 11 0 chr2 168237231 168237319 -82450535 + MER20 DNA MER1_type 129 217 -2 427 322 143 32 chr2 168237852 168238166 -82449688 - L2 LINE L2 -571 2743 2395 818 206 7 7 chr2 168238189 168238344 -82449510 + MER2 DNA MER2_type 1 155 -190 289 250 23 0 chr2 168438641 168438729 -82249125 - L1MC4 LINE L1 -1339 6703 6614 266 191 0 16 chr2 168438732 168438795 -82249059 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 1547 208 0 0 chr2 168438796 168439084 -82248770 - AluSx SINE Alu -23 289 2 235 187 133 27 chr2 168439348 168439423 -82248431 - MLT1G LTR MaLR -17 573 491 22 0 0 0 chr2 168439633 168439655 -82248199 + AT_rich Low_complexity Low_complexity 1 22 0 1072 134 25 0 chr2 168439865 168440066 -82247788 + L1MA8 LINE L1 6086 6291 0 657 252 120 71 chr2 168440956 168441107 -82246747 - L1MEc LINE L1 -5774 622 480 1877 127 87 6 chr2 168441107 168441429 -82246425 + MER7A DNA MER2_type 1 346 0 657 252 120 71 chr2 168441429 168441769 -82246085 - L1MEc LINE L1 -5916 480 107 323 191 32 40 chr2 168443128 168443254 -82244600 + (TATAA)n Simple_repeat Simple_repeat 5 129 0 5973 151 33 23 chr2 168443293 168444515 -82243339 + L1MC1 LINE L1 5093 6333 0 21 0 0 0 chr2 168445064 168445085 -82242769 + AT_rich Low_complexity Low_complexity 1 21 0 222 62 0 0 chr2 168445648 168445680 -82242174 + (CA)n Simple_repeat Simple_repeat 2 33 0 195 42 0 0 chr2 168445817 168445841 -82242013 + (GGGA)n Simple_repeat Simple_repeat 2 25 0 26 0 0 0 chr2 168447240 168447266 -82240588 + AT_rich Low_complexity Low_complexity 1 26 0 22 56 0 0 chr2 168447363 168447399 -82240455 + AT_rich Low_complexity Low_complexity 1 36 0 269 319 69 108 chr2 168448277 168448612 -82239242 + L2 LINE L2 2360 2681 -633 194 150 25 0 chr2 168448664 168448704 -82239150 + GA-rich Low_complexity Low_complexity 2 42 0 233 323 213 40 chr2 168448773 168449200 -82238654 + L2 LINE L2 2812 3312 -1 285 51 0 0 chr2 168449870 168449909 -82237945 + (CA)n Simple_repeat Simple_repeat 1 39 0 30 45 0 0 chr2 168450327 168450371 -82237483 + AT_rich Low_complexity Low_complexity 1 44 0 2516 64 3 3 chr2 168451418 168451729 -82236125 - AluY SINE Alu 0 311 1 405 0 0 0 chr2 168451753 168451798 -82236056 + (TTA)n Simple_repeat Simple_repeat 2 46 0 694 197 15 0 chr2 168452022 168452154 -82235700 + AluJo SINE Alu 2 135 -177 2229 107 3 0 chr2 168452986 168453285 -82234569 - AluSq SINE Alu -13 300 1 406 91 26 26 chr2 168453288 168453365 -82234489 - L1PA10 LINE L1 0 6168 6092 2004 128 4 0 chr2 168453366 168453639 -82234215 - AluSx SINE Alu -38 274 1 2115 105 3 16 chr2 168454247 168454551 -82233303 + AluSx SINE Alu 1 300 -12 2249 160 89 5 chr2 168455094 168455519 -82232335 + L1MB1 LINE L1 5425 5885 -304 198 209 0 0 chr2 168455850 168455893 -82231961 + CT-rich Low_complexity Low_complexity 2 44 0 505 318 128 29 chr2 168456008 168456282 -82231572 - L2 LINE L2 -177 3136 2836 190 192 14 27 chr2 168456503 168456576 -82231278 + (TATATG)n Simple_repeat Simple_repeat 4 75 0 4636 190 41 6 chr2 168456956 168458109 -82229745 - L1MB3 LINE L1 -4 6179 4994 2146 101 38 3 chr2 168459630 168459917 -82227937 + AluSx SINE Alu 1 297 -15 732 274 42 30 chr2 168461400 168461663 -82226191 - L2 LINE L2 -15 3298 3033 390 327 37 23 chr2 168461915 168462129 -82225725 + MLT1I LTR MaLR 69 285 -124 630 216 8 22 chr2 168462253 168462387 -82225467 + FLAM_A SINE Alu 2 133 0 239 303 78 43 chr2 168462989 168463182 -82224672 - L1ME LINE L1 -278 5843 5631 2217 115 0 3 chr2 168463182 168463486 -82224368 + AluSq SINE Alu 1 303 -10 239 303 78 43 chr2 168463486 168463639 -82224215 - L1ME LINE L1 -490 5631 5485 1142 276 80 35 chr2 168463888 168464487 -82223367 - L1ME1 LINE L1 -6 6160 5535 577 158 184 2 chr2 168465793 168465929 -82221925 - L1MB4 LINE L1 0 6180 6017 279 287 83 15 chr2 168466323 168466650 -82221204 - L1MEd LINE L1 -856 1232 416 5704 172 30 19 chr2 168466748 168468510 -82219344 - L1MA8 LINE L1 -2 6289 4491 423 305 89 43 chr2 168468510 168468835 -82219019 - L1MEd LINE L1 -5098 1021 682 2800 122 115 11 chr2 168468921 168469462 -82218392 + Tigger3b DNA MER2_type 306 902 -329 231 61 0 0 chr2 168470311 168470344 -82217510 + (CA)n Simple_repeat Simple_repeat 2 34 0 690 218 53 0 chr2 168470355 168470488 -82217366 - FRAM SINE Alu -37 139 1 1830 200 81 7 chr2 168470552 168470982 -82216872 - MLT1C LTR MaLR 0 467 6 665 336 60 58 chr2 168473371 168473958 -82213896 + HERVL LTR ERVL 1873 2460 -3194 508 349 44 3 chr2 168474057 168474355 -82213499 + HERVL LTR ERVL 2604 2913 -2741 329 247 144 20 chr2 168474684 168474830 -82213024 + HERVL LTR ERVL 3338 3501 -2263 399 276 63 86 chr2 168476101 168476543 -82211311 - L1MDa LINE L1 -4574 1966 1535 1892 104 4 4 chr2 168477213 168477486 -82210368 - AluSx SINE Alu 0 305 33 2075 106 32 0 chr2 168477615 168477898 -82209956 + AluSg SINE Alu 1 292 -18 2412 93 0 0 chr2 168479619 168479929 -82207925 - AluSg SINE Alu 0 310 1 641 273 61 13 chr2 168480203 168480434 -82207420 - L1MEc LINE L1 -4677 1719 1478 1581 268 96 51 chr2 168480578 168480833 -82207021 - L1MEc LINE L1 -5127 1269 1027 2388 95 0 0 chr2 168480833 168481138 -82206716 + AluSx SINE Alu 1 305 -7 1581 268 96 51 chr2 168481138 168481490 -82206364 - L1MEc LINE L1 -5369 1027 692 2162 122 3 0 chr2 168481490 168481786 -82206068 - AluSp SINE Alu -16 297 1 1581 268 96 51 chr2 168481786 168482157 -82205697 - L1MEc LINE L1 -5704 692 246 27 0 0 0 chr2 168482730 168482757 -82205097 + AT_rich Low_complexity Low_complexity 1 27 0 195 297 102 55 chr2 168482920 168482971 -82204883 + MIR SINE MIR 108 155 -107 2078 91 7 24 chr2 168482971 168483268 -82204586 - AluSx SINE Alu -20 292 1 195 297 102 55 chr2 168483268 168483344 -82204510 + MIR SINE MIR 155 241 -21 507 311 42 40 chr2 168483542 168483966 -82203888 - L1MDa LINE L1 -4674 1866 1442 10141 193 27 9 chr2 168483984 168487194 -82200660 - L1MA4 LINE L1 -2 6298 3028 2057 113 6 52 chr2 168487207 168487371 -82200483 + THE1B LTR MaLR 1 171 -261 1815 151 53 0 chr2 168487371 168487656 -82200198 - AluSx SINE Alu -12 300 1 2057 113 6 52 chr2 168487656 168487843 -82200011 + THE1B LTR MaLR 171 406 -26 499 201 31 19 chr2 168487877 168488036 -82199818 + L1 LINE L1 2734 2894 -3252 2308 90 17 0 chr2 168488038 168488337 -82199517 + AluSg SINE Alu 1 304 -6 35813 83 7 11 chr2 168488398 168494559 -82193295 + L1PA6 LINE L1 3 6154 0 2522 261 138 22 chr2 168494580 168495982 -82191872 + L1 LINE L1 2942 4505 -1641 2946 271 45 51 chr2 168495992 168496801 -82191053 - L1MDa LINE L1 -1367 5173 4361 600 181 43 0 chr2 168496801 168496917 -82190937 - L1PA15 LINE L1 -13 6152 6032 2001 128 7 0 chr2 168496923 168497221 -82190633 + AluSg SINE Alu 9 308 -2 2946 271 45 51 chr2 168497221 168498692 -82189162 - L1MDa LINE L1 -2184 4356 1482 * 3942 277 71 25 chr2 168498687 168500026 -82187828 - L1MDa LINE L1 -4940 1600 200 1626 188 140 11 chr2 168500037 168500409 -82187445 + MSTA LTR MaLR 9 428 0 549 274 40 0 chr2 168500409 168500584 -82187270 - L1MDa LINE L1 -6340 200 19 251 331 15 54 chr2 168500638 168500768 -82187086 + L2 LINE L2 2934 3058 -214 223 270 225 9 chr2 168500907 168501018 -82186836 + L2 LINE L2 3138 3272 0 5614 221 37 26 chr2 168501435 168501825 -82186029 + L1 LINE L1 2224 2608 -3538 1789 166 6 35 chr2 168501825 168502144 -82185710 + AluSx SINE Alu 3 312 0 5614 221 37 26 chr2 168502144 168503308 -82184546 + L1 LINE L1 2608 3794 -2352 1960 148 61 17 chr2 168503309 168503668 -82184186 - THE1C LTR MaLR 0 375 1 2543 138 5 10 chr2 168503668 168504067 -82183787 - THE1C-int LTR MaLR 0 1580 1184 3864 152 10 19 chr2 168504067 168504146 -82183708 + L1 LINE L1 3791 3869 -2277 1720 151 148 13 chr2 168504146 168504523 -82183331 - MSTA LTR MaLR 0 428 1 8537 162 26 26 chr2 168504524 168506101 -82181753 - MSTA-int LTR MaLR -1 1579 3 1814 161 135 26 chr2 168506105 168506489 -82181365 - MSTA LTR MaLR -2 426 1 3864 152 10 19 chr2 168506489 168507104 -82180750 + L1 LINE L1 3872 4486 -1660 4854 100 18 32 chr2 168507990 168508248 -82179606 + L1MA2 LINE L1 5531 5791 -513 2187 50 7 4 chr2 168508248 168508525 -82179329 + AluY SINE Alu 1 278 -33 180 0 0 0 chr2 168508527 168508547 -82179307 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 4854 100 18 32 chr2 168508547 168509065 -82178789 + L1MA2 LINE L1 5792 6299 -5 253 349 36 0 chr2 168511156 168511239 -82176615 + L2 LINE L2 3175 3260 -12 522 291 95 11 chr2 168512811 168513000 -82174854 - MIR SINE MIR -38 224 20 696 185 12 17 chr2 168515089 168515262 -82172592 + CT-rich Low_complexity Low_complexity 4 175 0 1001 183 89 5 chr2 168515274 168515476 -82172378 - AluJb SINE Alu -9 303 85 333 253 53 67 chr2 168515478 168515628 -82172226 + L1MEd LINE L1 1108 1255 -4864 22 0 0 0 chr2 168515825 168515847 -82172007 + AT_rich Low_complexity Low_complexity 1 22 0 200 224 20 0 chr2 168515883 168515932 -82171922 + T-rich Low_complexity Low_complexity 2 51 0 384 319 92 29 chr2 168516424 168516697 -82171157 - L1MC/D LINE L1 -2238 5547 5258 534 331 92 52 chr2 168516802 168517526 -82170328 - L1MC/D LINE L1 -1027 5119 4367 411 216 37 12 chr2 168517586 168517748 -82170106 + (TA)n Simple_repeat Simple_repeat 1 166 0 1505 235 36 8 chr2 168517858 168518220 -82169634 + MLT1A2 LTR MaLR 3 374 0 3641 139 25 3 chr2 168519597 168520434 -82167420 + L1P5 LINE L1 4934 5788 -363 209 204 0 11 chr2 168520439 168520527 -82167327 + (TA)n Simple_repeat Simple_repeat 2 88 0 628 179 0 0 chr2 168520539 168520645 -82167209 + MLT2B3 LTR ERVL 15 120 -434 233 160 20 0 chr2 168520645 168520695 -82167159 + (TA)n Simple_repeat Simple_repeat 1 51 0 2286 89 62 0 chr2 168520711 168521049 -82166805 + L1PB1 LINE L1 5793 6151 0 221 239 0 0 chr2 168521071 168521117 -82166737 - MIR SINE MIR -105 157 112 1889 214 82 65 chr2 168521128 168521665 -82166189 + MLT2B3 LTR ERVL 1 546 -8 1316 211 48 0 chr2 168523629 168523899 -82163955 - AluJb SINE Alu -29 283 1 1886 221 89 4 chr2 168524322 168524784 -82163070 - MLT1D LTR MaLR -2 503 3 805 323 12 4 chr2 168525556 168525804 -82162050 + MIR SINE MIR 13 262 0 316 275 43 43 chr2 168526115 168526253 -82161601 - L2 LINE L2 0 3313 3176 284 386 17 6 chr2 168526390 168526566 -82161288 - L2 LINE L2 -383 2931 2754 333 264 58 0 chr2 168526644 168526731 -82161123 - MLT1D LTR MaLR -122 383 292 381 345 35 49 chr2 168526731 168526934 -82160920 - L2 LINE L2 -685 2629 2430 42 48 0 0 chr2 168528413 168528476 -82159378 + AT_rich Low_complexity Low_complexity 1 63 0 1334 300 45 32 chr2 168528490 168530037 -82157817 - L1ME2 LINE L1 -48 6116 4533 6908 227 31 17 chr2 168530057 168531915 -82155939 + L1 LINE L1 3040 4923 -1223 35 83 0 0 chr2 168531971 168532055 -82155799 + AT_rich Low_complexity Low_complexity 1 84 0 320 326 58 16 chr2 168532087 168532400 -82155454 - L1ME2 LINE L1 -1743 4403 4078 23 0 0 0 chr2 168532704 168532727 -82155127 + AT_rich Low_complexity Low_complexity 1 23 0 2817 169 22 7 chr2 168532727 168533267 -82154587 - L1PA16 LINE L1 -8 6158 5611 2677 217 41 4 chr2 168533267 168533971 -82153883 - L1 LINE L1 -2395 3751 3022 1853 266 148 22 chr2 168535046 168536469 -82151385 + L1MC4a LINE L1 2237 3838 -2308 1798 146 7 4 chr2 168536556 168536860 -82150994 - AluSg SINE Alu 0 305 1 721 230 7 7 chr2 168536881 168537033 -82150821 - FRAM SINE Alu -12 164 13 1187 152 0 0 chr2 168538009 168538187 -82149667 - AluSg/x SINE Alu -12 300 123 186 303 0 45 chr2 168539281 168539347 -82148507 + MER5A DNA MER1_type 122 184 -5 23 54 0 0 chr2 168540061 168540098 -82147756 + AT_rich Low_complexity Low_complexity 1 37 0 315 0 0 0 chr2 168540912 168540947 -82146907 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 236 263 18 0 chr2 168541462 168541519 -82146335 + GA-rich Low_complexity Low_complexity 1 58 0 407 303 27 23 chr2 168543112 168543373 -82144481 - MIR SINE MIR 0 262 1 235 304 208 36 chr2 168543570 168543738 -82144116 - MIR SINE MIR -36 226 30 2499 71 10 0 chr2 168544085 168544394 -82143460 - AluSp SINE Alu 0 313 2 32 26 0 0 chr2 168544464 168544503 -82143351 + AT_rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr2 168544742 168544771 -82143083 + AT_rich Low_complexity Low_complexity 1 29 0 391 320 83 24 chr2 168545180 168545470 -82142384 + L1MC4a LINE L1 4739 5051 -1095 445 239 0 0 chr2 168545504 168545596 -82142258 - U13 snRNA snRNA -4 100 9 395 291 60 67 chr2 168545792 168545964 -82141890 + L1MC4a LINE L1 5273 5445 -2363 1969 137 0 0 chr2 168545964 168546299 -82141555 + AluSq SINE Alu 1 335 0 395 291 60 67 chr2 168546299 168546441 -82141413 + L1MC4a LINE L1 5445 5586 -2222 472 238 27 56 chr2 168546667 168546905 -82140949 - MER41B LTR ERV1 -210 425 55 277 266 0 64 chr2 168547002 168547096 -82140758 + L1MC4a LINE L1 5569 5656 -2152 1752 96 0 0 chr2 168547126 168547375 -82140479 + L1PA13 LINE L1 5911 6159 -4 392 284 34 31 chr2 168547422 168547659 -82140195 + L1MC4a LINE L1 5716 5956 -1852 198 0 0 0 chr2 168547977 168547999 -82139855 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 2096 96 46 0 chr2 168548263 168548544 -82139310 + AluSc SINE Alu 1 294 -15 183 42 0 0 chr2 168548802 168548826 -82139028 + (CA)n Simple_repeat Simple_repeat 1 24 0 1082 197 65 55 chr2 168549096 168549386 -82138468 + AluJo SINE Alu 1 293 -9 21 36 0 0 chr2 168550271 168550299 -82137555 + AT_rich Low_complexity Low_complexity 1 28 0 298 333 57 8 chr2 168550391 168550514 -82137340 - L2 LINE L2 -5 3308 3180 941 122 8 0 chr2 168551128 168551259 -82136595 - AluSq/x SINE Alu -179 134 3 27 49 0 0 chr2 168553349 168553390 -82134464 + AT_rich Low_complexity Low_complexity 1 41 0 196 295 53 21 chr2 168554131 168554226 -82133628 - MIR3 SINE MIR 0 208 111 2454 84 3 0 chr2 168554331 168554641 -82133213 - AluSp SINE Alu 0 313 3 257 329 38 0 chr2 168555054 168555133 -82132721 - L2 LINE L2 -12 3260 3179 279 0 0 0 chr2 168555176 168555207 -82132647 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2123 89 7 11 chr2 168555208 168555490 -82132364 - AluSp SINE Alu -32 281 1 303 291 119 46 chr2 168555689 168555840 -82132014 - L2 LINE L2 -557 2757 2596 293 176 0 0 chr2 168556358 168556409 -82131445 + MER53 DNA DNA 139 189 0 213 342 154 0 chr2 168556586 168556735 -82131119 + MIR SINE MIR 43 214 -48 23 0 0 0 chr2 168560513 168560536 -82127318 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 168561178 168561208 -82126646 + AT_rich Low_complexity Low_complexity 1 30 0 1218 218 0 11 chr2 168563013 168563274 -82124580 + AluJb SINE Alu 1 258 -54 296 169 22 34 chr2 168563454 168563543 -82124311 + GA-rich Low_complexity Low_complexity 1 88 0 22 0 0 0 chr2 168563836 168563858 -82123996 + AT_rich Low_complexity Low_complexity 1 22 0 218 293 86 0 chr2 168564079 168564137 -82123717 - MIR SINE MIR -151 111 49 354 297 11 40 chr2 168565107 168565228 -82122626 + MIR SINE MIR 30 146 -64 602 193 15 15 chr2 168565236 168565371 -82122483 + L1MC4 LINE L1 7513 7647 -395 519 269 104 0 chr2 168565372 168565554 -82122300 + L1MD3 LINE L1 7787 7987 -8 551 259 117 15 chr2 168566125 168566330 -82121524 - MIR SINE MIR 0 262 37 499 310 51 48 chr2 168566570 168566941 -82120913 + L2 LINE L2 2208 2579 -735 243 247 96 0 chr2 168567518 168567591 -82120263 - MER20 DNA MER1_type -57 162 83 1107 172 6 0 chr2 168567917 168568097 -82119757 + MER2 DNA MER2_type 1 181 -164 30 69 0 0 chr2 168569955 168570013 -82117841 + AT_rich Low_complexity Low_complexity 1 58 0 2127 160 40 104 chr2 168570130 168570679 -82117175 - MLT2B2 LTR ERVL -1 514 1 8168 173 43 26 chr2 168570679 168572269 -82115585 - ERVL-B2 LTR ERVL -7 5757 4141 695 143 118 0 chr2 168572271 168572390 -82115464 - MLT2B2 LTR ERVL -382 133 1 2219 124 0 0 chr2 168572585 168572876 -82114978 - AluSx SINE Alu -21 291 1 394 269 99 9 chr2 168574089 168574254 -82113600 - MLT1L LTR MaLR -319 269 81 29 28 0 0 chr2 168575747 168575783 -82112071 + AT_rich Low_complexity Low_complexity 1 36 0 1201 264 112 55 chr2 168576096 168576641 -82111213 + LTR41 LTR ERVL 1 576 -197 3016 159 37 14 chr2 168577301 168577868 -82109986 + LTR22 LTR ERVK 1 580 0 3421 153 55 64 chr2 168577999 168578750 -82109104 + HERVK22 LTR ERVK 9 752 -6085 852 176 31 6 chr2 168579152 168579311 -82108543 + HERVK22 LTR ERVK 2327 2489 -4348 4494 106 129 12 chr2 168579354 168580074 -82107780 - pTR5 LTR ERV1 0 2438 1635 528 138 0 0 chr2 168580473 168580553 -82107301 + HERVK22 LTR ERVK 3474 3553 -3284 * 6446 118 8 12 chr2 168580549 168581634 -82106220 + HERVK22 LTR ERVK 2021 4824 -2013 4352 164 36 24 chr2 168581697 168582641 -82105213 + HERVKC4 LTR ERVK 2626 6834 -3 3208 145 26 28 chr2 168582642 168583223 -82104631 + LTR22 LTR ERVK 1 580 0 2393 109 17 0 chr2 168583488 168583836 -82104018 - L1PA10 LINE L1 -16 6152 5799 1632 224 128 29 chr2 168584049 168584559 -82103295 + L1MC3 LINE L1 6403 6962 -823 745 272 72 9 chr2 168584556 168584902 -82102952 - L1MCa LINE L1 -3462 2964 2597 * 827 192 51 31 chr2 168584890 168585330 -82102524 - L1MCa LINE L1 -4090 2336 1847 2756 214 48 35 chr2 168585331 168586163 -82101691 - L1MCa LINE L1 -4786 1640 798 4823 137 37 4 chr2 168586196 168586928 -82100926 + THE1-int LTR MaLR 506 1261 -319 335 211 79 40 chr2 168586928 168587004 -82100850 - AluS SINE Alu -223 80 2 898 221 100 108 chr2 168587008 168587488 -82100366 - L1MCa LINE L1 -5948 478 3 23 0 0 0 chr2 168587897 168587920 -82099934 + AT_rich Low_complexity Low_complexity 1 23 0 2872 117 28 37 chr2 168588599 168589136 -82098718 - L1MA3 LINE L1 -5 7719 7188 215 0 67 0 chr2 168589136 168589166 -82098688 + (TTTTC)n Simple_repeat Simple_repeat 5 36 0 1394 163 61 0 chr2 168589187 168589432 -82098422 - AluSq SINE Alu -53 260 1 * 8110 148 33 23 chr2 168589432 168590848 -82097006 - L1MA3 LINE L1 -526 7198 5798 2349 69 0 3 chr2 168590848 168591138 -82096716 + AluY SINE Alu 1 289 -22 188 0 74 0 chr2 168591148 168591175 -82096679 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 8110 148 33 23 chr2 168591175 168591721 -82096133 - L1MA3 LINE L1 -1934 5790 5206 10977 205 6 12 chr2 168591729 168594969 -82092885 - L1PA13 LINE L1 0 7601 4376 1349 157 0 0 chr2 168594969 168595195 -82092659 - L1P LINE L1 -3568 2578 2350 6389 254 48 37 chr2 168595202 168597513 -82090341 - L1PA13 LINE L1 -4286 3298 952 20717 158 49 7 chr2 168597541 168601487 -82086367 - L1MA3 LINE L1 -3444 4121 13 907 230 16 26 chr2 168601581 168601772 -82086082 - MER5A DNA MER1_type 0 189 1 2002 113 81 14 chr2 168604497 168604874 -82082980 + LTR7 LTR ERV1 3 450 0 390 314 92 7 chr2 168605400 168605553 -82082301 - L2 LINE L2 0 3313 3148 262 333 137 0 chr2 168605574 168605691 -82082163 + L2 LINE L2 3181 3313 0 * 423 334 161 26 chr2 168605686 168606183 -82081671 - L2 LINE L2 -1025 2289 1726 345 232 21 21 chr2 168606490 168606585 -82081269 - MLT1I LTR MaLR 0 409 315 258 314 10 20 chr2 168606902 168607004 -82080850 - MER5B DNA MER1_type -10 168 68 4256 206 34 20 chr2 168607561 168608240 -82079614 - MER54A LTR ERVL 0 901 206 2287 50 60 0 chr2 168608240 168608521 -82079333 + AluY SINE Alu 1 298 -13 4256 206 34 20 chr2 168608521 168608726 -82079128 - MER54A LTR ERVL -695 206 5 199 305 12 37 chr2 168609416 168609498 -82078356 + MIR SINE MIR 61 140 -122 29 0 0 0 chr2 168609556 168609585 -82078269 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 168609602 168609631 -82078223 + AT_rich Low_complexity Low_complexity 1 29 0 2061 113 3 0 chr2 168610634 168610947 -82076907 - AluSc SINE Alu 0 314 1 241 287 83 65 chr2 168611801 168611909 -82075945 - MIR3 SINE MIR -15 193 84 693 210 83 17 chr2 168611921 168612102 -82075752 - MER3 DNA MER1_type 0 209 17 460 181 11 0 chr2 168612429 168612523 -82075331 - L1PA15 LINE L1 -4 6161 6067 204 376 43 54 chr2 168614267 168614453 -82073401 - L2 LINE L2 -56 3216 3033 22 0 0 0 chr2 168615214 168615236 -82072618 + AT_rich Low_complexity Low_complexity 1 22 0 361 314 142 15 chr2 168615244 168615581 -82072273 - HAL1 LINE L1 0 2507 2128 714 293 43 53 chr2 168615747 168616163 -82071691 - HAL1 LINE L1 -623 1884 1473 300 233 27 0 chr2 168616172 168616245 -82071609 - L1MD3 LINE L1 -173 7822 7748 28648 125 18 57 chr2 168616253 168622675 -82065179 + L1PA8 LINE L1 12 6172 0 1747 236 49 7 chr2 168622706 168623156 -82064698 - L1MC4a LINE L1 -221 7587 7119 22 0 0 0 chr2 168623166 168623188 -82064666 + AT_rich Low_complexity Low_complexity 1 22 0 7781 18 0 0 chr2 168623198 168624129 -82063725 - L1PA2 LINE L1 0 6155 5226 13729 26 0 0 chr2 168624129 168625754 -82062100 + L1PA2 LINE L1 3613 5237 -909 2647 197 13 31 chr2 168625752 168626356 -82061498 - L1MC3 LINE L1 -10 7775 7183 * 790 306 73 68 chr2 168626328 168626460 -82061394 - HAL1 LINE L1 -1337 1170 1040 * 1770 195 12 32 chr2 168626460 168626891 -82060963 - L1MA9 LINE L1 -3 6309 5888 790 306 73 68 chr2 168626891 168627575 -82060279 - HAL1 LINE L1 -1467 1040 350 625 305 155 27 chr2 168628188 168628634 -82059220 + MLT1J LTR MaLR 3 505 -6 861 151 178 36 chr2 168629556 168629775 -82058079 + L1PB4 LINE L1 5907 6156 0 2201 95 3 0 chr2 168629869 168630176 -82057678 + AluSx SINE Alu 1 308 0 3692 176 42 9 chr2 168630559 168631345 -82056509 - L1MA7 LINE L1 -10 6281 5470 375 42 0 0 chr2 168631347 168631395 -82056459 + L1MA7 LINE L1 5433 5480 -811 334 299 87 22 chr2 168631715 168631899 -82055955 - L2 LINE L2 -9 3304 3109 307 236 63 31 chr2 168633126 168633253 -82054601 + L1MC5 LINE L1 7630 7760 -201 226 408 0 6 chr2 168633631 168633805 -82054049 + C-rich Low_complexity Low_complexity 4 176 0 203 222 32 0 chr2 168633917 168633980 -82053874 + GA-rich Low_complexity Low_complexity 1 65 0 198 348 36 14 chr2 168636950 168637088 -82050766 + MER5A DNA MER1_type 24 164 -25 1155 131 26 11 chr2 168637633 168637824 -82050030 - L1MA7 LINE L1 -451 5840 5647 2274 136 8 75 chr2 168637828 168638320 -82049534 + L1MA7 LINE L1 5833 6291 0 396 350 67 35 chr2 168639038 168639318 -82048536 - L1MC4a LINE L1 -1928 5880 5584 2239 126 0 0 chr2 168639318 168639627 -82048227 + AluSx SINE Alu 1 309 -3 396 350 67 35 chr2 168639627 168639717 -82048137 - L1MC4a LINE L1 -2224 5584 5498 433 303 0 8 chr2 168641002 168641121 -82046733 + MER94 DNA DNA 3 120 -14 743 195 59 42 chr2 168643059 168643295 -82044559 - L1ME2 LINE L1 -210 5954 5715 433 279 19 33 chr2 168643376 168643591 -82044263 - L1MDa LINE L1 -4597 1943 1732 369 271 7 14 chr2 168643805 168643949 -82043905 + (TA)n Simple_repeat Simple_repeat 1 143 0 260 311 122 25 chr2 168644284 168644570 -82043284 - L1ME LINE L1 -316 5805 5492 46 68 0 0 chr2 168644593 168644681 -82043173 + AT_rich Low_complexity Low_complexity 1 88 0 904 336 139 7 chr2 168646285 168646862 -82040992 - L3 LINE CR1 -153 1424 772 339 369 84 9 chr2 168646884 168647109 -82040745 - MIR SINE MIR -2 260 19 23 0 0 0 chr2 168647701 168647724 -82040130 + AT_rich Low_complexity Low_complexity 1 23 0 2316 74 3 3 chr2 168647770 168648079 -82039775 - AluY SINE Alu -2 309 1 28 29 0 0 chr2 168649913 168649948 -82037906 + AT_rich Low_complexity Low_complexity 1 35 0 597 43 0 87 chr2 168649948 168650040 -82037814 - L1PA5 LINE L1 -7 6147 6064 182 340 122 19 chr2 168651766 168651922 -82035932 - L2 LINE L2 -849 2465 2294 21 36 0 0 chr2 168652745 168652773 -82035081 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr2 168652919 168652956 -82034898 + AT_rich Low_complexity Low_complexity 1 37 0 432 118 0 0 chr2 168653116 168653184 -82034670 + (TA)n Simple_repeat Simple_repeat 1 68 0 181 210 32 0 chr2 168653212 168653274 -82034580 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 290 216 48 16 chr2 168654449 168654574 -82033280 + (TTATA)n Simple_repeat Simple_repeat 4 132 0 21 0 0 0 chr2 168654899 168654920 -82032934 + AT_rich Low_complexity Low_complexity 1 21 0 2117 102 15 24 chr2 168655057 168655391 -82032463 - L1PA13 LINE L1 0 6163 5833 771 132 0 0 chr2 168655391 168655512 -82032342 + L1P LINE L1 4645 4765 -1381 1257 49 6 0 chr2 168656130 168656292 -82031562 + L1PA4 LINE L1 5993 6155 0 207 310 0 0 chr2 168656762 168656820 -82031034 + (TTA)n Simple_repeat Simple_repeat 2 59 0 1123 215 12 8 chr2 168656833 168657075 -82030779 - MIR SINE MIR -5 257 15 226 184 26 0 chr2 168657096 168657172 -82030682 + (CAT)n Simple_repeat Simple_repeat 3 80 0 24 53 0 0 chr2 168657878 168657916 -82029938 + AT_rich Low_complexity Low_complexity 1 38 0 299 191 44 0 chr2 168658377 168658445 -82029409 + L1MB7 LINE L1 6104 6174 -10 532 317 102 62 chr2 168659064 168659713 -82028141 + HAL1b LINE L1 109 783 -565 282 309 118 25 chr2 168659770 168660007 -82027847 + Charlie8 DNA MER1_type 58 1407 -1010 240 186 0 0 chr2 168660753 168660812 -82027042 + (TA)n Simple_repeat Simple_repeat 1 59 0 254 270 72 45 chr2 168661369 168661480 -82026374 - MIR SINE MIR -74 188 75 192 179 0 0 chr2 168661563 168661602 -82026252 + GA-rich Low_complexity Low_complexity 3 41 0 324 272 39 75 chr2 168662887 168662927 -82024927 - MIR SINE MIR -62 200 160 1804 195 25 8 chr2 168662927 168663286 -82024568 - MLT1A1 LTR MaLR 0 365 1 324 272 39 75 chr2 168663286 168663435 -82024419 - MIR SINE MIR -102 160 24 190 346 86 12 chr2 168664198 168664279 -82023575 - MIR SINE MIR -15 247 161 231 0 77 0 chr2 168664280 168664319 -82023535 + GA-rich Low_complexity Low_complexity 2 43 0 180 143 0 0 chr2 168664318 168664341 -82023513 + (TG)n Simple_repeat Simple_repeat 1 26 -9 * 2209 84 10 0 chr2 168664341 168664639 -82023215 - AluY SINE Alu -10 301 1 180 143 0 0 chr2 168664639 168664650 -82023204 + (TG)n Simple_repeat Simple_repeat 25 35 0 204 342 108 9 chr2 168664652 168664763 -82023091 - MIR SINE MIR -122 140 19 249 33 0 0 chr2 168665373 168665403 -82022451 + (A)n Simple_repeat Simple_repeat 1 30 0 3292 65 5 7 chr2 168666320 168666754 -82021100 - L1PA7 LINE L1 -14 6140 5708 217 233 192 0 chr2 168666909 168666982 -82020872 - L2 LINE L2 -1 3312 3226 196 318 127 9 chr2 168667017 168667127 -82020727 - MIR SINE MIR -4 258 136 1106 167 48 53 chr2 168667347 168667548 -82020306 + MER2 DNA MER2_type 2 201 -144 1793 166 27 23 chr2 168667548 168667927 -82019927 - Tigger3(Golem) DNA MER2_type -1 3028 1 577 220 113 0 chr2 168667928 168668069 -82019785 + MER2 DNA MER2_type 188 344 -1 1183 143 10 15 chr2 168668101 168668297 -82019557 - AluJb SINE Alu -13 299 105 24 77 0 0 chr2 168668625 168668677 -82019177 + AT_rich Low_complexity Low_complexity 1 52 0 333 102 0 0 chr2 168669582 168669641 -82018213 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 229 154 51 0 chr2 168669647 168669686 -82018168 - MLT1H LTR MaLR -49 500 460 272 193 70 0 chr2 168669869 168669926 -82017928 - MLT1H LTR MaLR -488 61 1 28 0 0 0 chr2 168670000 168670028 -82017826 + AT_rich Low_complexity Low_complexity 1 28 0 2623 81 7 65 chr2 168670071 168670489 -82017365 - L1PA7 LINE L1 -2 6152 5759 1702 108 0 0 chr2 168670492 168670742 -82017112 + L1P LINE L1 3745 3994 -2152 2160 124 21 3 chr2 168670742 168671080 -82016774 - L1PA16 LINE L1 -9 6157 5814 22 56 0 0 chr2 168672551 168672587 -82015267 + AT_rich Low_complexity Low_complexity 1 36 0 682 287 42 17 chr2 168672722 168672959 -82014895 + MIR SINE MIR 10 252 -10 354 306 52 0 chr2 168673150 168673284 -82014570 - MIR SINE MIR -9 253 113 21 0 0 0 chr2 168673831 168673852 -82014002 + AT_rich Low_complexity Low_complexity 1 21 0 217 356 11 22 chr2 168673906 168673996 -82013858 - L2 LINE L2 -48 3224 3136 394 283 102 31 chr2 168674105 168674459 -82013395 + L1MC5 LINE L1 7310 7688 -273 246 230 108 65 chr2 168674481 168674620 -82013234 + L1MC5 LINE L1 7743 7887 -74 193 242 172 70 chr2 168674706 168674834 -82013020 - L2 LINE L2 -217 3055 2915 2183 76 22 0 chr2 168675646 168675922 -82011932 - AluSc SINE Alu -24 285 4 4586 139 29 42 chr2 168675963 168676820 -82011034 - L1PA16 LINE L1 0 6166 5321 23 0 0 0 chr2 168677776 168677799 -82010055 + AT_rich Low_complexity Low_complexity 1 23 0 4389 146 14 4 chr2 168677867 168678628 -82009226 + L1MA4 LINE L1 5532 6300 0 2662 101 2 15 chr2 168679395 168679790 -82008064 - L1PA8 LINE L1 -6 6166 5777 3631 82 21 1 chr2 168679959 168680780 -82007074 - L1PA8 LINE L1 -471 5701 4870 519 73 0 0 chr2 168680779 168680847 -82007007 + L1P LINE L1 3757 3824 -2322 * 345 183 19 145 chr2 168680847 168681009 -82006845 - LTR9 LTR ERV1 -31 581 366 419 92 15 0 chr2 168681139 168681204 -82006650 + (TTCC)n Simple_repeat Simple_repeat 1 66 0 2028 144 7 0 chr2 168681204 168681503 -82006351 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 168682625 168682646 -82005208 + AT_rich Low_complexity Low_complexity 1 21 0 344 293 49 16 chr2 168683075 168683198 -82004656 + MIR SINE MIR 116 242 -20 397 382 64 4 chr2 168683664 168683897 -82003957 + L3 LINE CR1 612 858 -719 1231 174 22 4 chr2 168683915 168684145 -82003709 + AluJo SINE Alu 66 299 -13 230 372 173 16 chr2 168684171 168684362 -82003492 + L3 LINE CR1 891 1111 -466 770 202 25 18 chr2 168685173 168685386 -82002468 + MER33 DNA MER1_type 1 188 -97 1324 239 15 0 chr2 168685386 168685646 -82002208 + Tigger7 DNA MER2_type 2 265 -2222 439 211 0 0 chr2 168685649 168685739 -82002115 + Tigger7 DNA MER2_type 2402 2491 0 26 64 0 0 chr2 168685793 168685840 -82002014 + AT_rich Low_complexity Low_complexity 1 47 0 550 186 48 0 chr2 168685883 168686007 -82001847 + MER33 DNA MER1_type 194 323 -1 389 289 170 7 chr2 168686030 168686165 -82001689 + MER5A DNA MER1_type 32 188 -1 705 235 31 19 chr2 168686192 168686354 -82001500 - MER5B DNA MER1_type -14 164 1 345 301 111 13 chr2 168686638 168686791 -82001063 + L2 LINE L2 3124 3291 -22 704 332 61 48 chr2 168686815 168687376 -82000478 - MLT1K LTR MaLR -10 578 11 240 250 0 0 chr2 168687423 168687487 -82000367 - L1MC4 LINE L1 -1339 6703 6640 196 75 25 25 chr2 168687489 168687529 -82000325 + (TA)n Simple_repeat Simple_repeat 2 41 0 189 345 17 17 chr2 168688004 168688062 -81999792 + MIR SINE MIR 17 74 -134 2517 123 11 5 chr2 168688062 168688435 -81999419 - THE1C LTR MaLR 0 375 1 6786 213 84 8 chr2 168688435 168689904 -81997950 - THE1C-int LTR MaLR 0 1580 1 2380 142 8 3 chr2 168689904 168690277 -81997577 - THE1C LTR MaLR 0 375 1 293 339 43 0 chr2 168690279 168690394 -81997460 + MIR SINE MIR 71 190 -72 210 208 0 0 chr2 168691356 168691409 -81996445 + (TATG)n Simple_repeat Simple_repeat 4 56 0 210 354 125 0 chr2 168691534 168691630 -81996224 - L2 LINE L2 -12 3301 3194 289 329 51 44 chr2 168692865 168693023 -81994831 + MIR SINE MIR 81 239 -23 782 149 20 0 chr2 168693098 168693246 -81994608 - L1MA8 LINE L1 -3 6288 6138 890 48 112 0 chr2 168693246 168693371 -81994483 + MER85 DNA T2_type 1 139 0 1095 142 5 59 chr2 168693388 168693607 -81994247 + L1MA8 LINE L1 5947 6153 -138 450 291 128 34 chr2 168694236 168694415 -81993439 + MIR SINE MIR 59 254 -8 206 300 0 33 chr2 168694557 168694617 -81993237 + L3 LINE CR1 1515 1572 -5 212 171 0 0 chr2 168695484 168695525 -81992329 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 243 273 66 50 chr2 168695581 168695823 -81992031 - L1ME4a LINE L1 -64 6057 5812 23 54 0 0 chr2 168695926 168695963 -81991891 + AT_rich Low_complexity Low_complexity 1 37 0 31 26 0 0 chr2 168698734 168698772 -81989082 + AT_rich Low_complexity Low_complexity 1 38 0 559 279 86 44 chr2 168698968 168699330 -81988524 + L1MC4a LINE L1 5594 5970 -1838 630 270 77 12 chr2 168699475 168699734 -81988120 - L1ME3A LINE L1 -22 6148 5873 502 307 26 26 chr2 168700093 168700246 -81987608 - HERV16 LTR ERVL -1910 3086 2934 426 273 10 0 chr2 168700241 168700340 -81987514 - HERV16 LTR ERVL -2190 2806 2707 * 735 196 37 0 chr2 168700432 168700595 -81987259 + MLT1D LTR MaLR 5 173 -332 585 204 113 16 chr2 168701064 168701250 -81986604 + MLT1D LTR MaLR 300 503 -2 424 290 30 53 chr2 168701292 168701461 -81986393 - HERV16 LTR ERVL -4103 893 729 495 232 80 66 chr2 168701521 168701810 -81986044 - LTR16A1 LTR ERVL -164 293 1 250 320 95 0 chr2 168701953 168702100 -81985754 - L1M4 LINE L1 -3594 2552 2392 256 350 14 35 chr2 168702910 168703053 -81984801 + MER117 DNA MER1_type 15 154 -43 1008 326 89 16 chr2 168703714 168704461 -81983393 + L2 LINE L2 2511 3313 0 21 0 0 0 chr2 168705353 168705374 -81982480 + AT_rich Low_complexity Low_complexity 1 21 0 36 62 0 0 chr2 168706510 168706574 -81981280 + AT_rich Low_complexity Low_complexity 1 64 0 1712 150 10 33 chr2 168707011 168707311 -81980543 + AluJb SINE Alu 6 298 -14 1630 125 50 39 chr2 168708241 168708563 -81979291 + AluSq SINE Alu 1 325 0 202 325 38 0 chr2 168708863 168708943 -81978911 + L2 LINE L2 1993 2075 -1239 33 0 0 0 chr2 168709531 168709564 -81978290 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 168709633 168709654 -81978200 + AT_rich Low_complexity Low_complexity 1 21 0 2089 104 0 10 chr2 168709758 168710055 -81977799 - AluY SINE Alu -17 294 1 4769 59 16 1 chr2 168710684 168711696 -81976158 - MER11A LTR ERVK 0 1266 1 2101 140 0 0 chr2 168711724 168712032 -81975822 + AluSc SINE Alu 1 308 -1 1583 98 45 0 chr2 168712288 168712532 -81975322 - MLT2A2 LTR ERVL -198 255 1 1853 224 85 10 chr2 168714367 168714863 -81972991 - Tigger7 DNA MER2_type -200 533 1 390 320 27 99 chr2 168716841 168717135 -81970719 - L2 LINE L2 -52 3220 2948 186 286 61 0 chr2 168717162 168717211 -81970643 + L2 LINE L2 3190 3241 -72 182 315 192 0 chr2 168717193 168717266 -81970588 - L2 LINE L2 -16 3297 3211 * 418 376 122 43 chr2 168717370 168717961 -81969893 - L2 LINE L2 -2293 1021 353 1856 107 0 35 chr2 168717961 168718250 -81969604 + L1PA8A LINE L1 5850 6128 -3 418 376 122 43 chr2 168718250 168718430 -81969424 - L2 LINE L2 -2961 353 189 186 103 0 0 chr2 168721146 168721175 -81966679 + (T)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr2 168721829 168721857 -81965997 + AT_rich Low_complexity Low_complexity 1 28 0 229 353 49 48 chr2 168722888 168723034 -81964820 - MIR SINE MIR -61 147 6 180 263 0 0 chr2 168724051 168724089 -81963765 - L2 LINE L2 -12 3301 3264 818 149 0 0 chr2 168724521 168724642 -81963212 + FLAM_C SINE Alu 1 121 -12 443 170 57 0 chr2 168724732 168724838 -81963016 - L1MB7 LINE L1 0 6184 6073 2973 201 67 42 chr2 168725443 168725587 -81962267 - L1ME2 LINE L1 -118 6440 6301 2885 84 0 0 chr2 168725587 168725980 -81961874 - L1PA13 LINE L1 -1 6162 5770 2973 201 67 42 chr2 168725980 168727348 -81960506 - L1ME2 LINE L1 -257 6301 4890 2510 246 67 59 chr2 168727346 168728153 -81959701 - L1ME2 LINE L1 -2906 3634 2835 * 2051 29 4 0 chr2 168728153 168728399 -81959455 - L1PA3 LINE L1 0 6155 5909 2510 246 67 59 chr2 168728399 168728915 -81958939 - L1ME2 LINE L1 -3705 2835 2318 186 103 0 0 chr2 168728915 168728944 -81958910 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 2510 246 67 59 chr2 168728944 168728974 -81958880 - L1ME2 LINE L1 -4222 2318 2290 616 217 120 11 chr2 168729016 168729200 -81958654 - L1ME2 LINE L1 -4366 2174 1971 866 183 170 35 chr2 168729200 168729430 -81958424 + L1PB4 LINE L1 5892 6152 -4 534 198 149 0 chr2 168729810 168729931 -81957923 + MER5A DNA MER1_type 48 186 -3 807 251 16 0 chr2 168729948 168730139 -81957715 - MER3 DNA MER1_type -15 194 1 618 283 0 0 chr2 168730193 168730345 -81957509 + LTR33 LTR ERVL 1 152 -369 412 84 14 14 chr2 168730765 168730836 -81957018 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 2288 108 0 0 chr2 168731029 168731336 -81956518 + AluSg SINE Alu 1 307 -3 254 319 28 7 chr2 168733314 168733458 -81954396 + L1MEc LINE L1 38 184 -6212 719 289 103 33 chr2 168733488 168734000 -81953854 + L1MEc LINE L1 631 1178 -5218 1278 268 50 35 chr2 168734049 168734653 -81953201 + L1MEc LINE L1 1620 2232 -4164 1598 266 47 12 chr2 168734755 168735397 -81952457 + L1MEc LINE L1 2306 2969 -3246 1477 261 61 27 chr2 168735392 168735978 -81951876 + L1M4 LINE L1 4183 4788 -1358 * 455 269 87 20 chr2 168735978 168736127 -81951727 - MIR SINE MIR -30 232 74 2138 114 70 9 chr2 168736813 168737156 -81950698 + THE1B LTR MaLR 1 364 0 732 300 115 32 chr2 168737727 168738074 -81949780 - LTR16A LTR ERVL -54 396 21 24 32 0 0 chr2 168738371 168738402 -81949452 + AT_rich Low_complexity Low_complexity 1 31 0 289 320 13 95 chr2 168738461 168738839 -81949015 + L2 LINE L2 2283 2629 -685 219 336 44 9 chr2 168739099 168739212 -81948642 + L2 LINE L2 2936 3052 -220 2787 7 0 0 chr2 168739832 168740139 -81947715 - AluY SINE Alu -4 307 1 22 70 0 0 chr2 168740785 168740828 -81947026 + AT_rich Low_complexity Low_complexity 1 43 0 1864 143 11 0 chr2 168741265 168741551 -81946303 + AluSx SINE Alu 1 289 -23 249 83 0 0 chr2 168741552 168741588 -81946266 + (CA)n Simple_repeat Simple_repeat 2 37 0 282 331 33 0 chr2 168741756 168741877 -81945977 - MIR3 SINE MIR -28 180 56 494 277 126 19 chr2 168742116 168742275 -81945579 + MIR SINE MIR 1 176 -86 778 178 8 0 chr2 168742275 168742404 -81945450 + AluJ SINE Alu 1 130 -172 1807 152 68 17 chr2 168742420 168742775 -81945079 - THE1C LTR MaLR -2 373 1 922 184 7 0 chr2 168742775 168742945 -81944909 + AluJ SINE Alu 138 308 0 202 272 25 25 chr2 168742949 168743030 -81944824 + MIR SINE MIR 172 252 -10 27 0 0 0 chr2 168743297 168743324 -81944530 + AT_rich Low_complexity Low_complexity 1 27 0 3479 107 8 2 chr2 168743495 168743970 -81943884 - MER1A DNA MER1_type 0 529 52 249 299 49 28 chr2 168744367 168744511 -81943343 - MARNA DNA Mariner -45 541 395 1787 191 0 9 chr2 168744535 168744850 -81943004 - AluJb SINE Alu 0 312 1 649 254 5 5 chr2 168745388 168745573 -81942281 - L1MEc LINE L1 -3033 3349 3165 186 118 88 0 chr2 168745581 168745683 -81942171 + (TA)n Simple_repeat Simple_repeat 1 111 0 1130 271 23 23 chr2 168745703 168746098 -81941756 - L1 LINE L1 -3246 3136 2742 4118 61 0 2 chr2 168746103 168746630 -81941224 - L1PA5 LINE L1 -5 6149 5624 931 290 94 51 chr2 168746730 168747760 -81940094 - L1MEc LINE L1 -3142 3240 2189 713 243 35 0 chr2 168747948 168748150 -81939704 - L1MEc LINE L1 -4979 1405 1197 459 335 63 81 chr2 168748974 168749568 -81938286 - L2 LINE L2 0 3272 2686 2163 193 117 2 chr2 168749699 168750306 -81937548 - SATR1 Satellite Satellite -2 676 1 28 0 0 0 chr2 168750306 168750334 -81937520 + AT_rich Low_complexity Low_complexity 1 28 0 409 205 5 63 chr2 168750342 168750532 -81937322 + (TAA)n Simple_repeat Simple_repeat 1 179 0 278 200 0 0 chr2 168750535 168750585 -81937269 - SATR1 Satellite Satellite -156 314 265 47 33 0 0 chr2 168750588 168750649 -81937205 + AT_rich Low_complexity Low_complexity 1 61 0 1938 193 114 1 chr2 168750649 168751124 -81936730 + SATR1 Satellite Satellite 1 528 -101 2728 183 34 0 chr2 168751235 168751759 -81936095 - L1MB8 LINE L1 -186 5992 5451 2571 222 44 66 chr2 168751840 168752790 -81935064 - L1MB8 LINE L1 -1719 4427 3499 1091 61 0 0 chr2 168752866 168752997 -81934857 - AluY SINE Alu -17 294 164 486 264 39 0 chr2 168753006 168753184 -81934670 - L1MB8 LINE L1 -2927 3219 3035 26 64 0 0 chr2 168753288 168753335 -81934519 + AT_rich Low_complexity Low_complexity 1 47 0 1453 246 37 38 chr2 168755485 168755592 -81932262 + L1M4b LINE L1 1165 1271 -5584 904 228 86 100 chr2 168755592 168756102 -81931752 + MLT1D LTR MaLR 3 505 0 1453 246 37 38 chr2 168756102 168756586 -81931268 + L1M4b LINE L1 1271 1755 -5100 6364 210 29 12 chr2 168756689 168758246 -81929608 + L1M1 LINE L1 3188 4771 -1375 2009 146 28 56 chr2 168758245 168758582 -81929272 + L1M1 LINE L1 5228 5551 -752 * 2311 98 3 0 chr2 168758582 168758889 -81928965 + AluY SINE Alu 1 308 -3 2009 146 28 56 chr2 168758889 168758986 -81928868 + L1M1 LINE L1 5551 5649 -654 2276 176 110 8 chr2 168759609 168761114 -81926740 - SATR1 Satellite Satellite -1 1658 1 2551 39 23 6 chr2 168761216 168761735 -81926119 - L1P2 LINE L1 -565 5589 5065 * 6059 52 79 0 chr2 168761731 168762538 -81925316 + L1P2 LINE L1 4203 5073 -1073 1276 241 84 55 chr2 168762540 168763666 -81924188 - L1M4 LINE L1 -3625 2345 1186 846 252 0 36 chr2 168763788 168764010 -81923844 - L1M4 LINE L1 -4994 897 684 728 327 53 10 chr2 168764011 168764371 -81923483 - L1M4 LINE L1 -5379 512 240 515 303 21 86 chr2 168764373 168764700 -81923154 - MER77 LTR ERV1 -296 309 4 1729 170 7 14 chr2 168767252 168767546 -81920308 - AluSg SINE Alu -18 292 1 969 247 0 0 chr2 168768048 168768287 -81919567 - L1P LINE L1 -1020 5126 4888 2012 147 3 9 chr2 168768295 168768629 -81919225 + L1PB3 LINE L1 5820 6151 -3 436 325 152 0 chr2 168768884 168769075 -81918779 - MIR SINE MIR -29 233 14 213 247 214 45 chr2 168769412 168769566 -81918288 - MIR SINE MIR -6 256 77 340 274 24 0 chr2 168769893 168769977 -81917877 - MIR SINE MIR 0 262 177 182 195 0 208 chr2 168770064 168770141 -81917713 + MER5A DNA MER1_type 65 125 -64 2122 134 3 0 chr2 168770153 168770451 -81917403 - AluSx SINE Alu -13 299 1 22 35 0 0 chr2 168771700 168771729 -81916125 + AT_rich Low_complexity Low_complexity 1 29 0 357 62 0 0 chr2 168772407 168772455 -81915399 + (TG)n Simple_repeat Simple_repeat 1 48 0 3511 189 27 0 chr2 168772909 168773604 -81914250 - L1MB1 LINE L1 -18 6150 5437 2788 216 20 27 chr2 168773605 168773857 -81913997 + L1 LINE L1 4699 4951 -1195 2316 88 0 3 chr2 168773857 168774151 -81913703 + AluY SINE Alu 1 293 -18 2788 216 20 27 chr2 168774151 168774593 -81913261 + L1 LINE L1 4951 5388 -758 396 88 0 0 chr2 168776046 168776103 -81911751 + (TG)n Simple_repeat Simple_repeat 2 58 0 2601 84 6 8 chr2 168776143 168776499 -81911355 - THE1A LTR MaLR 0 355 1 11262 105 11 0 chr2 168776499 168778061 -81909793 - THE1A-int LTR MaLR 0 1580 1 2641 99 0 0 chr2 168778061 168778416 -81909438 - THE1A LTR MaLR 0 355 1 2405 157 108 13 chr2 168780100 168781934 -81905920 + SATR1 Satellite Satellite 1 2007 -62 23 0 0 0 chr2 168782315 168782338 -81905516 + AT_rich Low_complexity Low_complexity 1 23 0 360 0 0 0 chr2 168782375 168782415 -81905439 + (CA)n Simple_repeat Simple_repeat 2 41 0 447 345 52 22 chr2 168782528 168782760 -81905094 + MIR SINE MIR 20 258 -4 281 288 123 34 chr2 168786836 168786982 -81900872 - L2 LINE L2 -2 3311 3153 1197 143 22 14 chr2 168786994 168787217 -81900637 - MER57B LTR ERV1 -6 428 204 3716 159 71 34 chr2 168787220 168787559 -81900295 - MER57B-int LTR ERV1 -3698 4118 3793 2050 132 7 0 chr2 168787559 168787848 -81900006 - AluSq SINE Alu -22 291 1 3716 159 71 34 chr2 168787848 168789067 -81898787 - MER57B-int LTR ERV1 -4023 3793 288 * 4092 147 24 21 chr2 168789061 168789734 -81898120 - MER57B-int LTR ERV1 -6862 675 1 2386 165 11 16 chr2 168789734 168790170 -81897684 - MER57B LTR ERV1 0 434 1 350 349 150 15 chr2 168790173 168790546 -81897308 - L2 LINE L2 -175 3138 2710 1456 207 31 17 chr2 168791493 168791851 -81896003 + MLT1A1 LTR MaLR 3 365 0 2443 129 5 16 chr2 168792421 168792800 -81895054 - THE1C LTR MaLR 0 375 1 1703 231 62 2 chr2 168792957 168793412 -81894442 + MER21B LTR ERV1 321 802 -61 305 102 0 0 chr2 168794228 168794277 -81893577 - MLT2B1 LTR ERVL -14 506 458 40250 42 23 1 chr2 168794379 168799842 -81888012 - L1P1 LINE L1 -558 5597 13 3768 188 40 17 chr2 168800275 168801393 -81886461 - L1MB1 LINE L1 -1 6167 5023 1296 60 5 0 chr2 168801513 168801697 -81886157 + L1P LINE L1 4631 4815 -1331 38094 69 10 3 chr2 168801901 168808003 -81879851 - L1PA5 LINE L1 0 6154 11 1298 99 0 16 chr2 168808305 168808487 -81879367 - AluSq SINE Alu -134 179 1 2385 178 31 25 chr2 168808602 168809079 -81878775 + MLT2B1 LTR ERVL 1 480 -40 200 182 0 0 chr2 168809086 168809119 -81878735 + (TG)n Simple_repeat Simple_repeat 2 34 0 1776 198 15 3 chr2 168809120 168809459 -81878395 - MER2 DNA MER2_type 0 344 2 441 0 0 0 chr2 168809459 168809508 -81878346 + (CA)n Simple_repeat Simple_repeat 2 50 0 279 0 0 0 chr2 168809507 168809538 -81878316 + (GA)n Simple_repeat Simple_repeat 2 32 0 * 1952 134 3 3 chr2 168809538 168809851 -81878003 - Tigger3(Golem) DNA MER2_type -7 3022 2710 256 284 45 0 chr2 168809843 168809910 -81877944 - Tigger3(Golem) DNA MER2_type -2951 78 9 * 954 181 110 9 chr2 168809986 168810213 -81877641 + ERVL-B1 LTR ERVL 2 251 -5513 570 310 21 10 chr2 168810718 168810941 -81876913 + L2 LINE L2 2782 3006 -307 431 252 114 24 chr2 168810947 168811070 -81876784 + L2 LINE L2 3180 3313 0 24 0 0 0 chr2 168811551 168811575 -81876279 + AT_rich Low_complexity Low_complexity 1 24 0 250 316 9 35 chr2 168811662 168811776 -81876078 - MIR SINE MIR -61 201 91 896 291 52 21 chr2 168813101 168813520 -81874334 + L2 LINE L2 2246 2677 -637 28 61 0 0 chr2 168813743 168813792 -81874062 + AT_rich Low_complexity Low_complexity 1 49 0 4201 203 39 36 chr2 168813796 168815415 -81872439 + L1MA8 LINE L1 2503 4270 -1876 4612 151 55 15 chr2 168815415 168816275 -81871579 + MER4D LTR ERV1 1 894 -9 393 150 58 42 chr2 168816282 168816402 -81871452 + L1MA8 LINE L1 4266 4387 -1759 330 91 18 0 chr2 168816405 168816460 -81871394 + MADE1 DNA Mariner 25 80 0 4053 205 30 0 chr2 168816460 168817439 -81870415 + L1MA8 LINE L1 4386 5393 -753 3886 185 33 23 chr2 168817551 168818471 -81869383 + L1MA8 LINE L1 5360 6288 -3 23 54 0 0 chr2 168819642 168819679 -81868175 + AT_rich Low_complexity Low_complexity 1 37 0 215 191 0 0 chr2 168820606 168820648 -81867206 + MIR3 SINE MIR 150 191 -17 676 254 97 0 chr2 168820855 168820875 -81866979 - MLT1A1 LTR MaLR -3 362 345 195 42 0 0 chr2 168820875 168820899 -81866955 + (CAA)n Simple_repeat Simple_repeat 3 26 0 676 254 97 0 chr2 168820899 168821063 -81866791 - MLT1A1 LTR MaLR -20 345 160 204 40 0 0 chr2 168822655 168822680 -81865174 + (TG)n Simple_repeat Simple_repeat 2 26 0 3083 160 23 3 chr2 168823047 168823977 -81863877 + L1P4 LINE L1 4830 5782 -379 324 316 181 38 chr2 168824212 168824681 -81863173 - L2 LINE L2 -394 2920 2385 2163 204 35 55 chr2 168827676 168828437 -81859417 + L1MD3 LINE L1 7054 7995 0 23 54 0 0 chr2 168828490 168828527 -81859327 + AT_rich Low_complexity Low_complexity 1 37 0 282 262 75 117 chr2 168830971 168831185 -81856669 + MIR SINE MIR 2 206 -56 198 272 54 43 chr2 168831683 168831775 -81856079 - MIR SINE MIR -111 151 59 5351 99 29 13 chr2 168831901 168832727 -81855127 - L1PA11 LINE L1 -1 6173 5335 3195 201 66 15 chr2 168832827 168833685 -81854169 - L1 LINE L1 -2161 4189 3288 416 121 0 0 chr2 168833723 168833781 -81854073 - AluSc SINE Alu -14 295 238 5863 77 6 64 chr2 168833785 168834660 -81853194 - LTR12 LTR ERV1 -2 824 1 5402 96 3 0 chr2 168834660 168835432 -81852422 - HERV9 LTR ERV1 0 8399 7626 1042 96 0 0 chr2 168835430 168835587 -81852267 - HERV9 LTR ERV1 -5156 1740 1584 * 1852 110 59 40 chr2 168835564 168836229 -81851625 - HERV9 LTR ERV1 -3380 4405 877 1300 106 0 0 chr2 168836204 168836393 -81851461 - HERV9 LTR ERV1 -3455 4944 4756 * 13446 109 9 9 chr2 168836392 168839225 -81848629 - HERV9 LTR ERV1 -5427 2972 58 5634 80 12 71 chr2 168839273 168840150 -81847704 - LTR12 LTR ERV1 0 826 1 1870 106 0 0 chr2 168840154 168840389 -81847465 - AluSc SINE Alu -74 235 1 651 269 41 0 chr2 168840395 168840592 -81847262 - L1 LINE L1 -4957 1324 1120 1962 148 7 3 chr2 168840598 168840889 -81846965 - AluSx SINE Alu -20 292 1 614 372 40 28 chr2 168841262 168841765 -81846089 - L1 LINE L1 -5770 511 3 306 256 25 25 chr2 168843050 168843210 -81844644 + (TA)n Simple_repeat Simple_repeat 1 160 0 21 0 0 0 chr2 168843579 168843600 -81844254 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 168847470 168847495 -81840359 + AT_rich Low_complexity Low_complexity 1 25 0 268 272 133 6 chr2 168848426 168848586 -81839268 + L1ME LINE L1 5582 5764 -357 1850 140 58 0 chr2 168848592 168848885 -81838969 + AluSx SINE Alu 1 310 -2 207 0 0 0 chr2 168848918 168848941 -81838913 + (CA)n Simple_repeat Simple_repeat 2 24 0 273 57 0 0 chr2 168849104 168849139 -81838715 + (CA)n Simple_repeat Simple_repeat 2 36 0 658 289 70 19 chr2 168849313 168849569 -81838285 - MLT1J LTR MaLR -9 502 234 198 50 75 0 chr2 168849768 168849808 -81838046 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 23 33 0 0 chr2 168849863 168849893 -81837961 + AT_rich Low_complexity Low_complexity 1 30 0 245 169 17 0 chr2 168850626 168850685 -81837169 + CT-rich Low_complexity Low_complexity 1 60 0 577 250 172 17 chr2 168851635 168851867 -81835987 + MLT1F1 LTR MaLR 156 423 -144 267 176 20 0 chr2 168852330 168852381 -81835473 + LTR50 LTR ERVL 2 53 -742 * 2627 163 11 8 chr2 168852378 168852850 -81835004 - MER50 LTR ERV1 -218 516 44 336 276 123 50 chr2 168852842 168853103 -81834751 + LTR50 LTR ERVL 510 789 -6 * 1879 196 99 22 chr2 168853149 168853604 -81834250 + LTR2B LTR ERV1 1 490 0 9719 167 19 5 chr2 168854259 168856879 -81830975 - L1PA13 LINE L1 -7 6807 4162 685 256 53 14 chr2 168856898 168857105 -81830749 + L1PA13 LINE L1 592 806 -5981 * 1907 190 13 24 chr2 168857098 168857562 -81830292 + L1P LINE L1 2946 3404 -2742 870 130 40 17 chr2 168857698 168857875 -81829979 - L1MA8 LINE L1 -19 6272 6092 1316 184 79 57 chr2 168857884 168858200 -81829654 - L1PA13 LINE L1 -6360 427 105 635 117 0 11 chr2 168858224 168858318 -81829536 + MER4A LTR ERV1 6 98 -566 1760 117 177 76 chr2 168858318 168858685 -81829169 + MER4A LTR ERV1 261 664 0 4501 136 41 40 chr2 168858685 168859541 -81828313 + LTR49-int LTR ERV1 5475 6331 0 3264 154 35 3 chr2 168859542 168860118 -81827736 + LTR49 LTR ERV1 2 595 0 6230 183 51 10 chr2 168860118 168861516 -81826338 - L1 LINE L1 -1275 4871 3417 216 340 100 20 chr2 168861543 168861643 -81826211 - MIR SINE MIR -109 153 46 183 351 45 9 chr2 168861845 168861956 -81825898 + MIR SINE MIR 86 200 -62 473 248 169 40 chr2 168862546 168862871 -81824983 - MLT1J LTR MaLR -21 468 120 336 281 182 20 chr2 168863091 168863294 -81824560 - L1 LINE L1 -3609 2537 2302 2470 87 0 0 chr2 168864313 168864625 -81823229 + AluSx SINE Alu 1 312 0 832 306 4 8 chr2 168864887 168865139 -81822715 - MIR SINE MIR 0 262 12 1530 204 0 17 chr2 168865165 168865488 -81822366 + AluJb SINE Alu 1 318 0 196 319 26 71 chr2 168865556 168865669 -81822185 - MIR SINE MIR 0 262 155 300 278 21 21 chr2 168866183 168866280 -81821574 + L1MC4 LINE L1 6616 6712 -1330 195 287 191 43 chr2 168866280 168866374 -81821480 - MIR SINE MIR -98 164 57 1784 180 7 10 chr2 168866409 168866714 -81821140 + AluJo SINE Alu 1 304 -8 732 102 31 0 chr2 168866715 168866843 -81821011 + GA-rich Low_complexity Low_complexity 1 132 0 305 365 94 22 chr2 168866982 168867163 -81820691 - L2 LINE L2 -672 2642 2449 2039 285 95 23 chr2 168867432 168868184 -81819670 - L1M4 LINE L1 -1456 4690 3800 1602 170 48 14 chr2 168868184 168868478 -81819376 - AluJb SINE Alu -8 304 1 2039 285 95 23 chr2 168868478 168868892 -81818962 - L1M4 LINE L1 -2346 3800 3417 2247 78 41 3 chr2 168868925 168869219 -81818635 - AluSg SINE Alu -5 305 1 611 313 59 55 chr2 168869336 168870054 -81817800 - ERVL LTR ERVL -1494 4160 3450 865 296 12 16 chr2 168870054 168870297 -81817557 - LTR16C LTR ERVL -181 310 69 1450 206 41 0 chr2 168870592 168870883 -81816971 - AluJo SINE Alu -5 307 5 22 35 0 0 chr2 168871244 168871273 -81816581 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr2 168871434 168871471 -81816383 + AT_rich Low_complexity Low_complexity 1 37 0 233 324 83 28 chr2 168871958 168872103 -81815751 + MLT1L LTR MaLR 1 153 -462 4239 134 9 16 chr2 168872224 168873462 -81814392 + L1P4 LINE L1 4545 5766 -395 455 211 62 2 chr2 168873479 168873629 -81814225 + L1M4 LINE L1 5325 5480 -690 369 134 73 7 chr2 168873732 168874042 -81813812 + (TTATA)n Simple_repeat Simple_repeat 1 330 0 985 164 13 78 chr2 168875020 168875251 -81812603 + L1MC3 LINE L1 6712 6927 -858 29 0 0 0 chr2 168877598 168877627 -81810227 + AT_rich Low_complexity Low_complexity 1 29 0 313 325 53 0 chr2 168877642 168877756 -81810098 + L2 LINE L2 3148 3267 -5 189 268 0 0 chr2 168878323 168878379 -81809475 + (TG)n Simple_repeat Simple_repeat 2 57 0 31 26 0 0 chr2 168878640 168878678 -81809176 + AT_rich Low_complexity Low_complexity 1 38 0 1893 251 29 21 chr2 168878811 168879432 -81808422 - L1M4c LINE L1 -3425 2957 2329 318 296 37 15 chr2 168879434 168879569 -81808285 - L1M4c LINE L1 -4214 2170 2033 5692 87 8 10 chr2 168879569 168880527 -81807327 - L1P3 LINE L1 -634 5520 4570 1708 124 14 37 chr2 168880672 168881055 -81806799 - Charlie3 DNA MER1_type 0 2712 1 228 271 57 0 chr2 168882668 168882738 -81805116 + Charlie8 DNA MER1_type 2341 2414 -3 463 10 106 0 chr2 168883700 168883804 -81804050 + (TA)n Simple_repeat Simple_repeat 2 116 0 52 50 0 0 chr2 168883804 168883884 -81803970 + AT_rich Low_complexity Low_complexity 1 80 0 274 237 11 65 chr2 168885143 168885236 -81802618 + L2 LINE L2 3226 3313 0 2192 194 34 74 chr2 168885717 168886395 -81801459 - L1MD3 LINE L1 -84 7911 7026 309 185 0 0 chr2 168886497 168886562 -81801292 + (TA)n Simple_repeat Simple_repeat 1 65 0 477 373 69 45 chr2 168886693 168887322 -81800532 + L2 LINE L2 2612 3256 -16 577 258 67 27 chr2 168888284 168888450 -81799404 - MIR SINE MIR -25 183 8 227 258 237 43 chr2 168890219 168890312 -81797542 + MIR SINE MIR 40 150 -58 22 35 0 0 chr2 168891242 168891271 -81796583 + AT_rich Low_complexity Low_complexity 1 29 0 296 311 135 5 chr2 168891331 168891478 -81796376 - MIR SINE MIR -65 143 30 303 320 32 32 chr2 168891550 168891675 -81796179 - MER5A DNA MER1_type -1 188 64 180 0 0 0 chr2 168892248 168892268 -81795586 + (A)n Simple_repeat Simple_repeat 1 20 0 393 70 0 0 chr2 168892362 168892419 -81795435 + (TG)n Simple_repeat Simple_repeat 1 57 0 5332 250 80 24 chr2 168892591 168894909 -81792945 + L1M4b LINE L1 6 2603 -4535 180 152 0 0 chr2 168894983 168895016 -81792838 + GA-rich Low_complexity Low_complexity 2 34 0 1162 193 43 12 chr2 168895175 168895429 -81792425 - LTR22 LTR ERVK 0 580 319 282 110 0 254 chr2 168895530 168895648 -81792206 + L1MC3 LINE L1 7685 7772 -13 2063 104 0 66 chr2 168895649 168895966 -81791888 + AluSq SINE Alu 1 296 -17 197 326 152 0 chr2 168896245 168896337 -81791517 + MIR3 SINE MIR 97 202 -6 292 286 31 20 chr2 168897292 168897390 -81790464 + MERVL LTR ERVL 4357 4455 -1030 2509 263 88 15 chr2 168897482 168897831 -81790023 - L1ME2 LINE L1 -27 6137 5815 192 77 0 0 chr2 168897831 168897857 -81789997 + (CATTC)n Simple_repeat Simple_repeat 2 27 0 2509 263 88 15 chr2 168897857 168898954 -81788900 - L1ME2 LINE L1 -349 5815 4590 381 43 0 0 chr2 168899736 168899783 -81788071 + (CA)n Simple_repeat Simple_repeat 2 48 0 447 253 5 104 chr2 168900454 168900656 -81787198 + L1ME3A LINE L1 5985 6166 -4 2219 116 0 3 chr2 168900935 168901246 -81786608 - AluSx SINE Alu -2 310 1 207 303 101 0 chr2 168901381 168901470 -81786384 + MIR SINE MIR 37 134 -128 270 184 23 23 chr2 168901989 168902076 -81785778 + (TATG)n Simple_repeat Simple_repeat 2 88 0 24 0 0 0 chr2 168902619 168902643 -81785211 + AT_rich Low_complexity Low_complexity 1 24 0 404 313 125 39 chr2 168903549 168904096 -81783758 - L2 LINE L2 -154 3159 2542 23 54 0 0 chr2 168904482 168904519 -81783335 + AT_rich Low_complexity Low_complexity 1 37 0 336 284 43 35 chr2 168906482 168906623 -81781231 + MIR SINE MIR 66 207 -55 499 279 0 0 chr2 168907072 168907201 -81780653 - L1PB4 LINE L1 -7 6149 6021 268 370 99 30 chr2 168909958 168910320 -81777534 - L2 LINE L2 -470 2844 2458 207 226 19 19 chr2 168911769 168911822 -81776032 - L2 LINE L2 0 3313 3261 246 338 125 12 chr2 168912202 168912362 -81775492 - L2 LINE L2 -470 2844 2667 1366 166 19 15 chr2 168912510 168912769 -81775085 - LTR22 LTR ERVK -320 260 1 21 36 0 0 chr2 168912814 168912842 -81775012 + AT_rich Low_complexity Low_complexity 1 28 0 3003 258 117 22 chr2 168912980 168914506 -81773348 + L1MDa LINE L1 2262 3928 -2612 321 234 91 0 chr2 168914511 168914588 -81773266 - MLT1F LTR MaLR -458 84 1 278 224 0 26 chr2 168916418 168916494 -81771360 + L1MDa LINE L1 4979 5052 -1488 189 151 57 0 chr2 168916579 168916632 -81771222 + GA-rich Low_complexity Low_complexity 5 60 0 310 319 137 17 chr2 168916641 168916882 -81770972 + L1MDa LINE L1 5086 5355 -1185 959 114 0 0 chr2 168916882 168917014 -81770840 + AluSg/x SINE Alu 161 292 -20 351 321 138 0 chr2 168917022 168917246 -81770608 + L1MDa LINE L1 5444 5698 -842 1625 208 28 77 chr2 168917283 168917816 -81770038 - L1MB7 LINE L1 -16 6168 5662 2411 84 26 55 chr2 168917821 168918200 -81769654 - L1PA14 LINE L1 -3 6158 5791 7046 183 15 10 chr2 168918200 168919641 -81768213 + L1P LINE L1 2908 4354 -1792 2513 153 34 0 chr2 168920149 168920561 -81767293 + MSTB LTR MaLR 1 426 0 720 149 155 20 chr2 168920768 168920916 -81766938 + MLT1E LTR MaLR 426 593 0 25 31 0 0 chr2 168922719 168922751 -81765103 + AT_rich Low_complexity Low_complexity 1 32 0 222 208 13 26 chr2 168924034 168924111 -81763743 + (TTA)n Simple_repeat Simple_repeat 3 78 0 438 295 36 71 chr2 168924143 168924674 -81763180 + L1MC4 LINE L1 6488 7084 -801 213 296 0 0 chr2 168925147 168925218 -81762636 + A-rich Low_complexity Low_complexity 1 71 0 888 251 58 64 chr2 168925346 168925688 -81762166 + MLT1D LTR MaLR 1 340 -165 22 0 0 0 chr2 168926522 168926544 -81761310 + AT_rich Low_complexity Low_complexity 1 22 0 1058 197 81 1 chr2 168926687 168926905 -81760949 + MLT2D LTR ERVL 1 228 -186 226 139 93 0 chr2 168926948 168926991 -81760863 + MLT2B1 LTR ERVL 474 520 0 444 272 65 24 chr2 168927023 168927192 -81760662 - L2 LINE L2 -1345 1969 1794 1673 199 85 45 chr2 168927515 168927987 -81759867 + MLT1D LTR MaLR 1 491 -14 275 286 0 0 chr2 168929140 168929210 -81758644 + T-rich Low_complexity Low_complexity 5 74 0 22 0 0 0 chr2 168930171 168930193 -81757661 + AT_rich Low_complexity Low_complexity 1 22 0 379 233 11 22 chr2 168930724 168930814 -81757040 - MIR SINE MIR -108 154 66 334 278 53 45 chr2 168930992 168931125 -81756729 + L2 LINE L2 3175 3308 -5 25 31 0 0 chr2 168931438 168931470 -81756384 + AT_rich Low_complexity Low_complexity 1 32 0 236 286 150 45 chr2 168931470 168931603 -81756251 - MIR SINE MIR -11 251 105 1104 183 54 5 chr2 168932023 168932247 -81755607 - L1MC2 LINE L1 -108 6236 6002 481 305 42 21 chr2 168933624 168933863 -81753991 + LTR16C LTR ERVL 240 483 -8 181 400 8 8 chr2 168934377 168934497 -81753357 + L2 LINE L2 2365 2484 -830 3375 168 40 35 chr2 168934512 168934947 -81752907 - L1MA8 LINE L1 -36 6255 5813 225 0 0 0 chr2 168934947 168934972 -81752882 + (TG)n Simple_repeat Simple_repeat 2 26 0 3375 168 40 35 chr2 168934972 168935232 -81752622 - L1MA8 LINE L1 -478 5813 5556 27 0 0 0 chr2 168935259 168935286 -81752568 + AT_rich Low_complexity Low_complexity 1 27 0 43586 42 3 1 chr2 168935286 168941423 -81746431 - L1PA3 LINE L1 -3 6152 9 2235 181 11 20 chr2 168941409 168942123 -81745731 - L1MA8 LINE L1 -717 5574 4871 * 4047 213 62 11 chr2 168942147 168943121 -81744733 - L1MA7 LINE L1 0 6291 5269 2024 163 11 17 chr2 168943121 168943319 -81744535 - MER7A DNA MER2_type -2692 346 151 2287 101 30 41 chr2 168943319 168943687 -81744167 + THE1B LTR MaLR 1 364 0 2024 163 11 17 chr2 168943687 168943838 -81744016 - MER7A DNA MER2_type -2887 151 1 519 213 9 0 chr2 168943838 168943946 -81743908 - L1MA7 LINE L1 -876 5270 5162 3454 161 9 5 chr2 168943947 168944601 -81743253 - L1MA8 LINE L1 -1272 4874 4218 267 190 50 10 chr2 168944603 168944703 -81743151 - L1MA8 LINE L1 -2877 3269 3166 363 162 0 0 chr2 168944705 168944773 -81743081 + L1 LINE L1 4403 4470 -1676 1012 257 12 9 chr2 168944790 168945133 -81742721 - L1MA8 LINE L1 -2985 3161 2818 630 306 60 42 chr2 168946270 168946702 -81741152 + MLT1J1 LTR MaLR 7 446 0 210 37 0 0 chr2 168947132 168947159 -81740695 + (TA)n Simple_repeat Simple_repeat 2 28 0 29 0 0 0 chr2 168948398 168948427 -81739427 + AT_rich Low_complexity Low_complexity 1 29 0 1995 99 0 89 chr2 168948455 168948779 -81739075 - AluSp SINE Alu -14 299 5 184 300 150 30 chr2 168950144 168950244 -81737610 + MIR SINE MIR 23 134 -74 1301 183 82 57 chr2 168951012 168951379 -81736475 - MER51B LTR ERV1 0 377 2 282 56 0 0 chr2 168951495 168951531 -81736323 + (TGGA)n Simple_repeat Simple_repeat 2 37 0 2333 87 7 0 chr2 168951995 168952295 -81735559 + AluSp SINE Alu 1 302 -11 213 224 176 24 chr2 168952480 168952565 -81735289 + MIR SINE MIR 156 253 -9 211 245 85 64 chr2 168953730 168953824 -81734030 + MER5C DNA MER1_type 29 124 -200 219 167 14 97 chr2 168953967 168954039 -81733815 + MER5C DNA MER1_type 259 324 0 1306 308 12 12 chr2 168954209 168954624 -81733230 + LTR16A LTR ERVL 35 449 -1 599 256 154 0 chr2 168955281 168955437 -81732417 + MER5A DNA MER1_type 10 189 0 1095 201 107 10 chr2 168956431 168956730 -81731124 - L1MEc LINE L1 -6057 339 12 1078 243 73 30 chr2 168956949 168957428 -81730426 - MLT1E LTR MaLR -2 591 1 2060 144 0 0 chr2 168957466 168957829 -81730025 - AluSx SINE Alu 0 363 1 28 29 0 0 chr2 168957838 168957873 -81729981 + AT_rich Low_complexity Low_complexity 1 35 0 578 364 66 36 chr2 168958924 168959620 -81728234 + L2 LINE L2 2170 2886 -428 282 303 75 45 chr2 168960582 168960849 -81727005 + L1MEd LINE L1 276 550 -5569 386 259 157 61 chr2 168960946 168961309 -81726545 + L1MEd LINE L1 685 1082 -5037 261 280 74 32 chr2 168961337 168961526 -81726328 + L1MEd LINE L1 1176 1372 -4938 1970 140 3 0 chr2 168961919 168962212 -81725642 + AluSx SINE Alu 1 294 -18 556 157 77 18 chr2 168962661 168962865 -81724989 + L1MC3 LINE L1 6735 7038 -747 257 282 0 14 chr2 168962879 168962950 -81724904 + MLT1F1 LTR MaLR 45 114 -453 3025 187 10 10 chr2 168962956 168963539 -81724315 + L1MC3 LINE L1 7184 7766 -19 21 57 0 0 chr2 168963656 168963691 -81724163 + AT_rich Low_complexity Low_complexity 1 35 0 876 195 38 24 chr2 168964151 168964189 -81723665 - MLT2B1 LTR ERVL 0 520 484 234 91 0 0 chr2 168964189 168964222 -81723632 + (TG)n Simple_repeat Simple_repeat 2 34 0 876 195 38 24 chr2 168964222 168964393 -81723461 - MLT2B1 LTR ERVL -36 484 308 1644 249 35 9 chr2 168964845 168965338 -81722516 + LTR51 LTR ERV1 222 923 0 1649 258 27 30 chr2 168966107 168966545 -81721309 + MER21B LTR ERV1 12 448 -415 13959 45 3 1 chr2 169016549 169018493 -81669361 - L1P2 LINE L1 -545 5609 3661 12429 29 0 3 chr2 169018593 169020621 -81667233 + L1PA3 LINE L1 3903 5924 -231 21 0 0 0 chr2 169020867 169020888 -81666966 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 169021442 169021464 -81666390 + AT_rich Low_complexity Low_complexity 1 22 0 262 301 57 46 chr2 169022295 169022458 -81665396 + MIR SINE MIR 27 185 -58 2382 77 3 13 chr2 169022882 169023193 -81664661 + AluY SINE Alu 3 310 -1 281 341 58 0 chr2 169024652 169024790 -81663064 + MIR SINE MIR 57 202 -60 270 297 59 30 chr2 169024891 169024992 -81662862 + MIR3 SINE MIR 66 169 -39 24051 72 5 1 chr2 169025393 169028654 -81659200 - L1P LINE L1 -2659 3487 2 880 247 39 9 chr2 169028665 169028896 -81658958 - MLT1H LTR MaLR -311 238 1 746 242 104 22 chr2 169029058 169029444 -81658410 + MLT1D LTR MaLR 3 446 -59 2066 92 0 7 chr2 169029449 169029721 -81658133 - AluY SINE Alu -5 306 37 1939 136 17 3 chr2 169029838 169030139 -81657715 + AluSx SINE Alu 3 307 -5 1575 197 132 28 chr2 169030172 169030451 -81657403 - MER67D LTR ERV1 -4 510 261 416 198 0 31 chr2 169030451 169030547 -81657307 - L1MA3 LINE L1 -5 6300 6208 1575 197 132 28 chr2 169030547 169030729 -81657125 - MER67D LTR ERV1 -253 261 1 540 276 33 43 chr2 169031483 169031693 -81656161 + L3 LINE CR1 1198 1405 -172 257 194 97 0 chr2 169032374 169032446 -81655408 - MER117 DNA MER1_type -117 80 2 1964 125 7 0 chr2 169033515 169033823 -81654031 - AluY SINE Alu 0 310 1 223 327 26 39 chr2 169033847 169034000 -81653854 - MER5A DNA MER1_type -4 185 35 * 274 316 19 45 chr2 169033864 169034019 -81653835 + MER5B DNA MER1_type 25 175 -3 279 330 25 51 chr2 169037721 169037839 -81650015 + MER5A DNA MER1_type 2 116 -73 477 314 75 46 chr2 169037938 169038394 -81649460 - L2 LINE L2 -5 3308 2840 560 226 0 0 chr2 169039356 169039458 -81648396 + Tigger3b DNA MER2_type 1 102 -1129 * 916 163 0 59 chr2 169039456 169039659 -81648195 + Tigger3b DNA MER2_type 274 464 -767 763 278 67 94 chr2 169039994 169041022 -81646832 - L1MEc LINE L1 -4187 2209 1210 471 306 15 15 chr2 169041236 169041432 -81646422 + L1MEc LINE L1 59 254 -6142 385 247 0 0 chr2 169041444 169041521 -81646333 + L1MEc LINE L1 565 641 -5755 1282 265 39 85 chr2 169041550 169042335 -81645519 - L1M4 LINE L1 -1052 5094 4274 1468 167 73 0 chr2 169042335 169042581 -81645273 + AluJo SINE Alu 1 264 -48 283 214 0 43 chr2 169042550 169042620 -81645234 + AluSp/q SINE Alu 234 300 -3 * 1282 265 39 85 chr2 169042581 169042771 -81645083 - L1M4 LINE L1 -1872 4274 4164 1410 278 51 20 chr2 169042984 169043570 -81644284 - L1M4 LINE L1 -1956 4190 3587 245 224 45 0 chr2 169043784 169043851 -81644003 - L1MC4a LINE L1 -492 7316 7247 644 255 148 0 chr2 169044258 169044454 -81643400 + L1MC4a LINE L1 7506 7730 -78 205 100 0 50 chr2 169045398 169045438 -81642416 + (CAAAAA)n Simple_repeat Simple_repeat 6 43 0 553 341 60 9 chr2 169045808 169046025 -81641829 - MIR SINE MIR -17 245 18 495 203 34 17 chr2 169046176 169046294 -81641560 + MER104 DNA Tc2 14 133 -47 521 306 45 18 chr2 169046361 169046583 -81641271 - MIR SINE MIR -15 247 20 1058 187 35 0 chr2 169046876 169047074 -81640780 - L1MC/D LINE L1 -670 5663 5459 385 275 75 0 chr2 169047114 169047234 -81640620 - MER94 DNA DNA -3 131 3 538 91 0 0 chr2 169048363 169048440 -81639414 + Alu SINE Alu 221 297 -15 204 179 0 0 chr2 169048465 169048504 -81639350 + CT-rich Low_complexity Low_complexity 2 40 0 517 305 67 42 chr2 169049249 169049534 -81638320 - L3 LINE CR1 -11 1566 1275 269 115 0 0 chr2 169051220 169051272 -81636582 + MER4B-int LTR ERV1 1145 1196 -5562 312 70 0 0 chr2 169051272 169051315 -81636539 + (TA)n Simple_repeat Simple_repeat 2 44 0 206 292 14 28 chr2 169051371 169051443 -81636411 + L2 LINE L2 3243 3313 0 1589 187 0 33 chr2 169051451 169051756 -81636098 + AluJo SINE Alu 1 295 -17 1530 218 33 90 chr2 169052944 169053457 -81634397 - MLT1D LTR MaLR -1 504 21 2206 251 77 49 chr2 169054871 169055814 -81632040 - L1ME3 LINE L1 -8 6548 5632 1554 178 24 24 chr2 169055814 169056112 -81631742 - AluJo SINE Alu -14 298 1 2206 251 77 49 chr2 169056112 169056665 -81631189 - L1ME3 LINE L1 -924 5632 5003 300 91 0 0 chr2 169056665 169056709 -81631145 + (CA)n Simple_repeat Simple_repeat 2 45 0 2206 251 77 49 chr2 169056709 169056751 -81631103 - L1ME3 LINE L1 -1553 5003 4964 2281 88 0 3 chr2 169056751 169057046 -81630808 - AluY SINE Alu -17 294 1 295 215 75 28 chr2 169057227 169057334 -81630520 + MER103 DNA DNA 55 166 0 309 164 19 106 chr2 169057597 169057701 -81630153 - LTR41 LTR ERVL -6 767 673 494 239 65 43 chr2 169058232 169058416 -81629438 - LTR41 LTR ERVL -585 188 1 576 223 11 0 chr2 169058585 169058738 -81629116 - L1MD2 LINE L1 -13 7807 6200 1062 242 26 7 chr2 169058746 169059015 -81628839 - L1MD2 LINE L1 -226 6133 5860 3731 268 96 66 chr2 169059021 169059878 -81627976 - L1ME3 LINE L1 -3922 2618 1788 258 108 0 0 chr2 169059878 169059915 -81627939 - LTR41 LTR ERVL -736 37 1 3731 268 96 66 chr2 169059915 169061545 -81626309 - L1ME3 LINE L1 -4752 1788 19 509 263 25 72 chr2 169062262 169062498 -81625356 - MER112 DNA MER1_type -35 225 1 192 40 0 0 chr2 169062688 169062713 -81625141 + (TG)n Simple_repeat Simple_repeat 2 26 0 568 284 120 27 chr2 169062848 169063073 -81624781 + MIR SINE MIR 15 260 -2 195 100 0 0 chr2 169066453 169066483 -81621371 + (CATATA)n Simple_repeat Simple_repeat 4 33 0 227 197 29 22 chr2 169066483 169066620 -81621234 + (TATATG)n Simple_repeat Simple_repeat 5 142 0 1522 157 19 77 chr2 169066964 169067277 -81620577 + AluSx SINE Alu 1 295 -17 7302 49 0 0 chr2 169067650 169069320 -81618534 - L1PA5 LINE L1 -3 6151 4480 30889 73 3 13 chr2 169069321 169071633 -81616221 - L1PA5 LINE L1 -1989 4157 1903 2403 77 3 0 chr2 169071633 169071943 -81615911 + AluY SINE Alu 1 311 0 30889 73 3 13 chr2 169071943 169073827 -81614027 - L1PA5 LINE L1 -4243 1903 2 23 68 0 0 chr2 169075489 169075533 -81612321 + AT_rich Low_complexity Low_complexity 1 44 0 237 293 60 72 chr2 169075786 169075953 -81611901 + MLT1K LTR MaLR 92 256 -332 624 271 41 66 chr2 169076880 169077124 -81610730 - MIR SINE MIR 0 262 25 23 68 0 0 chr2 169077705 169077749 -81610105 + AT_rich Low_complexity Low_complexity 1 44 0 1653 98 53 0 chr2 169077899 169078075 -81609779 - AluSp SINE Alu -5 308 116 183 42 0 0 chr2 169078075 169078099 -81609755 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1653 98 53 0 chr2 169078099 169078147 -81609707 - AluSp SINE Alu -197 116 72 957 218 95 41 chr2 169078914 169079281 -81608573 - LTR37A LTR ERV1 -19 407 21 3825 169 73 8 chr2 169079861 169080632 -81607222 + L1MC1 LINE L1 5513 6333 0 331 244 44 11 chr2 169080763 169080853 -81607001 - MIR SINE MIR -76 186 94 591 248 41 28 chr2 169080986 169081204 -81606650 - LTR37B LTR ERV1 -39 429 209 562 324 16 16 chr2 169081577 169081759 -81606095 + MIR SINE MIR 6 187 -75 1185 108 42 100 chr2 169083559 169083819 -81604035 - MSTA LTR MaLR -4 424 180 331 183 0 0 chr2 169083824 169083884 -81603970 + AluSg/x SINE Alu 211 270 -32 542 250 42 9 chr2 169084273 169084438 -81603416 + MIR SINE MIR 34 198 -62 236 296 45 0 chr2 169084466 169084554 -81603300 - MLT1J LTR MaLR -2 547 456 1717 121 10 2 chr2 169085577 169085870 -81601984 + THE1B LTR MaLR 1 363 -1 213 39 0 0 chr2 169086172 169086198 -81601656 + (TTCC)n Simple_repeat Simple_repeat 4 29 0 814 174 71 0 chr2 169086471 169086667 -81601187 - Tigger6a DNA MER2_type -22 1061 852 1256 84 22 11 chr2 169086767 169086946 -81600908 + L1PA10 LINE L1 5977 6157 -11 1653 236 19 27 chr2 169086986 169087473 -81600381 + L1MB7 LINE L1 5696 6178 -6 3610 203 16 45 chr2 169087473 169088314 -81599540 - Tigger6a DNA MER2_type -267 816 1 387 241 137 80 chr2 169088430 169088766 -81599088 - MLT1J LTR MaLR -50 461 107 24 67 0 0 chr2 169089224 169089269 -81598585 + AT_rich Low_complexity Low_complexity 1 45 0 447 293 89 44 chr2 169090350 169090575 -81597279 + MIR SINE MIR 28 262 0 260 283 0 50 chr2 169090737 169090836 -81597018 - MIR3 SINE MIR -2 206 113 1438 117 48 0 chr2 169094783 169095014 -81592840 + L1MA5A LINE L1 6051 6292 -5 30 45 0 0 chr2 169095014 169095058 -81592796 + AT_rich Low_complexity Low_complexity 1 44 0 357 109 0 0 chr2 169095160 169095215 -81592639 + (TTCA)n Simple_repeat Simple_repeat 2 56 0 587 340 100 38 chr2 169095285 169095954 -81591900 - L2 LINE L2 -144 3169 2450 417 327 75 47 chr2 169096765 169097083 -81590771 - MLT1I LTR MaLR -71 338 12 1606 199 3 10 chr2 169097441 169097752 -81590102 - AluJo SINE Alu -3 309 1 21 36 0 0 chr2 169097822 169097850 -81590004 + AT_rich Low_complexity Low_complexity 1 28 0 320 340 58 6 chr2 169098711 169098867 -81588987 + L3 LINE CR1 1360 1523 -54 266 286 39 0 chr2 169099170 169099247 -81588607 - MIR3 SINE MIR -4 204 125 22 0 0 0 chr2 169101434 169101456 -81586398 + AT_rich Low_complexity Low_complexity 1 22 0 430 235 61 23 chr2 169101456 169101588 -81586266 + L2 LINE L2 3176 3312 -1 1203 192 75 36 chr2 169102222 169102582 -81585272 + MLT1A2 LTR MaLR 1 374 0 369 245 35 63 chr2 169103690 169103833 -81584021 - MIR SINE MIR -100 162 24 353 238 9 38 chr2 169103852 169103957 -81583897 + MER5A DNA MER1_type 5 106 -83 1789 277 53 41 chr2 169104215 169105713 -81582141 + L1ME LINE L1 7 2730 -3350 235 65 0 0 chr2 169105713 169105769 -81582085 + AluSc SINE Alu 247 302 0 257 320 78 0 chr2 169105790 169105893 -81581961 + L1ME2 LINE L1 5988 6098 -66 1844 26 0 26 chr2 169105902 169106132 -81581722 + AluY SINE Alu 1 224 -87 2244 104 0 3 chr2 169106292 169106589 -81581265 - AluSq SINE Alu -15 298 3 516 293 49 15 chr2 169106619 169106882 -81580972 - L1ME LINE L1 -4139 2122 1851 1350 203 83 83 chr2 169107003 169107294 -81580560 - MLT1C LTR MaLR 0 467 174 1808 129 75 0 chr2 169107294 169107572 -81580282 - AluSx SINE Alu -11 301 3 1350 203 83 83 chr2 169107572 169107739 -81580115 - MLT1C LTR MaLR -292 175 9 847 269 74 50 chr2 169107779 169108687 -81579167 - L1ME LINE L1 -4451 1629 706 315 288 19 120 chr2 169108699 169109015 -81578839 - L1ME LINE L1 -5772 298 15 636 240 41 28 chr2 169109023 169109351 -81578503 - L1MCc LINE L1 -4973 1450 1374 323 366 56 19 chr2 169109567 169109783 -81578071 - L1MCc LINE L1 -6137 985 762 23 54 0 0 chr2 169111455 169111492 -81576362 + AT_rich Low_complexity Low_complexity 1 37 0 1707 263 165 19 chr2 169111608 169112404 -81575450 + L1MC4 LINE L1 6767 7678 -364 42702 31 21 2 chr2 169112432 169118468 -81569386 + L1HS LINE L1 4 6155 0 22 0 0 0 chr2 169118468 169118490 -81569364 + AT_rich Low_complexity Low_complexity 1 22 0 638 246 26 10 chr2 169118675 169118870 -81568984 + L1MD3 LINE L1 7787 7984 -11 1741 98 0 0 chr2 169118923 169119157 -81568697 - AluSc SINE Alu -75 234 1 346 283 43 43 chr2 169120045 169120183 -81567671 + L2 LINE L2 3176 3313 0 2007 147 13 0 chr2 169120326 169120632 -81567222 + AluSx SINE Alu 1 310 -2 2167 109 0 7 chr2 169121602 169121905 -81565949 + AluSc SINE Alu 1 301 -8 479 36 0 0 chr2 169122110 169122170 -81565684 - L1M4 LINE L1 -429 5739 5686 387 182 13 0 chr2 169122170 169122244 -81565610 + L1PA10 LINE L1 6080 6157 -11 1444 185 92 59 chr2 169122257 169122333 -81565521 + MER93b LTR ERV1 5 77 -296 2239 105 0 0 chr2 169122333 169122637 -81565217 + AluY SINE Alu 1 304 -7 1444 185 92 59 chr2 169122637 169122917 -81564937 + MER93b LTR ERV1 77 373 0 21 36 0 0 chr2 169123884 169123912 -81563942 + AT_rich Low_complexity Low_complexity 1 28 0 573 227 117 79 chr2 169124239 169124631 -81563223 - L1MC5 LINE L1 -390 7571 7165 758 199 0 0 chr2 169124879 169125010 -81562844 + FAM SINE Alu 2 132 -53 181 245 20 0 chr2 169126715 169126764 -81561090 + L2 LINE L2 3263 3312 -1 21 36 0 0 chr2 169127893 169127921 -81559933 + AT_rich Low_complexity Low_complexity 1 28 0 325 292 151 32 chr2 169128170 169128355 -81559499 - MIR SINE MIR -13 249 43 337 258 91 23 chr2 169129332 169129464 -81558390 - MIR3 SINE MIR -8 200 60 240 303 26 45 chr2 169129530 169129685 -81558169 + L3b LINE CR1 1191 1342 -241 261 332 42 42 chr2 169129945 169130135 -81557719 + L2 LINE L2 3124 3313 0 244 289 9 26 chr2 169131466 169131580 -81556274 + L1MC3 LINE L1 7600 7711 -74 225 0 0 0 chr2 169131657 169131682 -81556172 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 324 0 0 0 chr2 169131681 169131717 -81556137 + (CA)n Simple_repeat Simple_repeat 1 36 0 960 233 67 25 chr2 169131717 169132074 -81555780 + MER69 DNA AcHobo 2155 2526 0 252 347 135 1 chr2 169132092 169132373 -81555481 - L3 LINE CR1 -162 1415 1080 21 36 0 0 chr2 169132788 169132816 -81555038 + AT_rich Low_complexity Low_complexity 1 28 0 23 78 0 0 chr2 169132943 169132994 -81554860 + AT_rich Low_complexity Low_complexity 1 51 0 24 0 0 0 chr2 169133019 169133043 -81554811 + AT_rich Low_complexity Low_complexity 1 24 0 1593 56 0 0 chr2 169133043 169133240 -81554614 - L1PA3 LINE L1 -3 6152 5956 7420 31 13 0 chr2 169133340 169134262 -81553592 - L1P LINE L1 -2322 3824 2891 22 0 0 0 chr2 169134949 169134971 -81552883 + AT_rich Low_complexity Low_complexity 1 22 0 357 241 46 0 chr2 169135365 169135452 -81552402 - MER5A DNA MER1_type -71 118 28 244 277 134 60 chr2 169136164 169136662 -81551192 + HAL1 LINE L1 837 1371 -1136 479 324 49 3 chr2 169136674 169136864 -81550990 - MIR SINE MIR 0 262 7 365 280 136 37 chr2 169137307 169137347 -81550507 - MIR SINE MIR -26 236 201 413 36 18 0 chr2 169137347 169137402 -81550452 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 365 280 136 37 chr2 169137402 169137575 -81550279 - MIR SINE MIR -61 201 2 215 222 0 14 chr2 169138037 169138109 -81549745 + CT-rich Low_complexity Low_complexity 2 72 0 192 279 0 0 chr2 169138247 169138290 -81549564 + L2 LINE L2 2671 2713 -601 1009 285 50 48 chr2 169138510 169138973 -81548881 - LTR16B LTR ERVL 0 464 1 359 271 47 47 chr2 169138973 169139209 -81548645 - HERV16 LTR ERVL 0 4996 4761 303 269 51 39 chr2 169139257 169139413 -81548441 - HERV16 LTR ERVL -333 4663 4506 701 350 41 21 chr2 169139662 169140197 -81547657 - HERV16 LTR ERVL -4329 667 122 470 286 136 29 chr2 169140253 169140533 -81547321 - LTR16B LTR ERVL 0 464 155 253 331 29 43 chr2 169140806 169140945 -81546909 + L2 LINE L2 3134 3270 -2 214 227 0 0 chr2 169142946 169142990 -81544864 + MER5B DNA MER1_type 4 47 -131 1462 165 92 0 chr2 169143481 169143741 -81544113 + AluJb SINE Alu 9 292 -20 36134 38 1 11 chr2 169144358 169149690 -81538164 - L1PA3 LINE L1 -3 6152 873 349 276 124 42 chr2 169149709 169149974 -81537880 + L1ME LINE L1 5353 5639 -482 22 0 0 0 chr2 169150018 169150040 -81537814 + AT_rich Low_complexity Low_complexity 1 22 0 247 326 11 0 chr2 169150054 169150149 -81537705 - MIR SINE MIR -3 259 164 4882 152 20 1 chr2 169150227 169151063 -81536791 + L1M1 LINE L1 1721 2572 -4993 * 15328 114 13 6 chr2 169151060 169153421 -81534433 - L1PA7 LINE L1 -1940 4206 1830 8128 94 12 0 chr2 169153421 169155348 -81532506 + L1PA7 LINE L1 4198 6144 -10 5774 156 40 24 chr2 169155355 169155524 -81532330 + L1M1 LINE L1 2560 2725 -4840 225 65 0 0 chr2 169155524 169155555 -81532299 + (CAAAA)n Simple_repeat Simple_repeat 4 34 0 5774 156 40 24 chr2 169155555 169156724 -81531130 + L1M1 LINE L1 2725 3873 -3692 2592 93 3 3 chr2 169156724 169157079 -81530775 + THE1A LTR MaLR 1 355 0 10821 106 18 2 chr2 169157079 169158634 -81529220 + THE1A-int LTR MaLR 1 1580 0 2662 84 3 6 chr2 169158634 169158990 -81528864 + THE1A LTR MaLR 1 355 0 5774 156 40 24 chr2 169158990 169159236 -81528618 + L1M1 LINE L1 3872 4181 -3384 360 0 0 0 chr2 169159424 169159464 -81528390 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 0 0 0 chr2 169159605 169159627 -81528227 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr2 169159801 169159834 -81528020 + AT_rich Low_complexity Low_complexity 1 33 0 21 57 0 0 chr2 169160316 169160351 -81527503 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr2 169160540 169160582 -81527272 + AT_rich Low_complexity Low_complexity 1 42 0 262 250 0 110 chr2 169161213 169161313 -81526541 - L2 LINE L2 0 3272 3184 216 122 0 0 chr2 169161472 169161513 -81526341 + (CA)n Simple_repeat Simple_repeat 2 42 0 379 326 64 50 chr2 169161683 169161965 -81525889 + L1ME LINE L1 5532 5817 -345 1819 287 64 48 chr2 169162080 169163087 -81524767 + L1PA15 LINE L1 1 1536 -5251 14495 225 35 41 chr2 169163095 169167787 -81520067 + L1PA15 LINE L1 1650 6288 -528 594 175 0 0 chr2 169167802 169167916 -81519938 - L1P LINE L1 -2099 4047 3934 1032 209 51 0 chr2 169167934 169168188 -81519666 - L1P LINE L1 -1649 4497 4231 535 214 0 0 chr2 169168217 169168334 -81519520 - L1P LINE L1 -2099 4047 3931 2922 175 6 4 chr2 169168334 169168855 -81518999 + L1PA15 LINE L1 6289 6816 0 317 302 123 45 chr2 169168909 169169439 -81518415 + L1M4 LINE L1 4034 4604 -1542 487 175 0 0 chr2 169169954 169170034 -81517820 - MLT1A1 LTR MaLR -285 80 1 21 36 0 0 chr2 169173621 169173649 -81514205 + AT_rich Low_complexity Low_complexity 1 28 0 2144 127 0 0 chr2 169176310 169176618 -81511236 + AluSx SINE Alu 1 308 -4 732 171 33 39 chr2 169176812 169176982 -81510872 - MLT1H LTR MaLR 0 595 387 268 338 0 0 chr2 169178507 169178587 -81509267 + MIR SINE MIR 71 150 -112 259 244 156 25 chr2 169178869 169179029 -81508825 + MIR SINE MIR 82 262 0 225 108 0 0 chr2 169179031 169179068 -81508786 + (CAT)n Simple_repeat Simple_repeat 1 37 0 1409 156 20 80 chr2 169179912 169180289 -81507565 - AluJb SINE Alu 0 359 1 385 271 158 22 chr2 169180299 169180605 -81507249 - MLT1H1 LTR MaLR 0 555 224 1833 109 31 59 chr2 169180999 169181320 -81506534 - AluSx SINE Alu 0 312 1 396 0 0 0 chr2 169181359 169181403 -81506451 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 301 271 54 55 chr2 169181903 169182085 -81505769 + MLT1H1 LTR MaLR 351 582 -13 4370 236 75 112 chr2 169182334 169183416 -81504438 - L1MCc LINE L1 -1064 5877 4757 1662 236 35 15 chr2 169183416 169183874 -81503980 + MLT1C LTR MaLR 1 467 0 4370 236 75 112 chr2 169183874 169184067 -81503787 - L1MCc LINE L1 -2184 4757 4558 603 208 22 67 chr2 169184067 169184245 -81503609 - MER63A DNA MER1_type -39 171 2 4370 236 75 112 chr2 169184245 169185824 -81502030 - L1MCc LINE L1 -2383 4558 2957 583 146 109 0 chr2 169185996 169186133 -81501721 - L1MA9 LINE L1 0 6312 6161 * 620 255 103 26 chr2 169186127 169186398 -81501456 - L1MCc LINE L1 -4257 2865 2574 4543 188 15 24 chr2 169186403 169187510 -81500344 - L1MB2 LINE L1 -2 6169 5073 594 283 109 25 chr2 169187523 169187845 -81500009 - L1MCc LINE L1 -4539 2583 2235 * 1581 165 125 21 chr2 169187834 169187966 -81499888 - L1MA10 LINE L1 -7 6327 6210 195 42 0 0 chr2 169187966 169187990 -81499864 + (TG)n Simple_repeat Simple_repeat 2 25 0 1581 165 125 21 chr2 169187990 169188233 -81499621 - L1MA10 LINE L1 -124 6210 5913 2714 193 16 23 chr2 169188233 169188793 -81499061 + L1MA10 LINE L1 5339 5894 -274 967 276 72 20 chr2 169188795 169189334 -81498520 - L1MCc LINE L1 -4860 2262 1696 879 174 112 0 chr2 169189368 169189564 -81498290 - Tigger1 DNA MER2_type 0 2418 2201 867 173 13 6 chr2 169189552 169189708 -81498146 - Tigger1 DNA MER2_type -2261 157 1 * 284 279 19 82 chr2 169189757 169189915 -81497939 - L1MEc LINE L1 -5890 506 359 195 69 0 0 chr2 169190152 169190181 -81497673 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 245 319 29 0 chr2 169190186 169190324 -81497530 - L1MCc LINE L1 -4915 1508 1367 571 289 29 10 chr2 169190426 169190634 -81497220 - MER58C DNA MER1_type -3 212 1 1474 104 50 5 chr2 169190642 169190862 -81496992 - MER30 DNA MER1_type 0 230 1 916 257 41 24 chr2 169190946 169191238 -81496616 + MER2 DNA MER2_type 44 340 -5 311 315 99 11 chr2 169192790 169192971 -81494883 - MIR SINE MIR -2 260 64 28 0 0 0 chr2 169193989 169194017 -81493837 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 169194949 169194977 -81492877 + AT_rich Low_complexity Low_complexity 1 28 0 239 343 105 29 chr2 169195965 169196204 -81491650 + MIR SINE MIR 6 262 0 222 298 67 130 chr2 169196457 169196514 -81491340 + MIR3 SINE MIR 5 64 -144 387 89 0 0 chr2 169196514 169196570 -81491284 + (TG)n Simple_repeat Simple_repeat 1 56 0 1450 186 65 0 chr2 169196571 169196834 -81491020 - AluJb SINE Alu -32 280 1 222 298 67 130 chr2 169196834 169196982 -81490872 + MIR3 SINE MIR 63 199 -9 227 255 0 0 chr2 169197028 169197075 -81490779 + L2 LINE L2 3235 3281 -32 216 0 0 0 chr2 169197091 169197115 -81490739 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1709 113 0 110 chr2 169197575 169197885 -81489969 - AluSq SINE Alu -37 276 1 1465 181 36 4 chr2 169198755 169198909 -81488945 - AluSx SINE Alu -26 286 118 213 65 0 0 chr2 169198909 169198940 -81488914 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1465 181 36 4 chr2 169198940 169199061 -81488793 - AluSx SINE Alu -194 118 2 780 302 81 25 chr2 169199269 169199788 -81488066 - L2 LINE L2 -2 3311 2660 6741 211 28 12 chr2 169199790 169200414 -81487440 - L1 LINE L1 -1399 4747 4135 469 58 0 116 chr2 169200414 169200464 -81487390 - MADE1 DNA Mariner 0 80 42 2380 64 0 7 chr2 169200464 169200762 -81487092 + AluY SINE Alu 1 296 -15 469 58 0 116 chr2 169200762 169200797 -81487057 - MADE1 DNA Mariner -38 42 5 6741 211 28 12 chr2 169200797 169201809 -81486045 - L1 LINE L1 -2011 4135 3084 189 0 0 0 chr2 169201931 169201952 -81485902 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 242 178 22 0 chr2 169201969 169202014 -81485840 - L2 LINE L2 -668 2646 2601 21 0 0 0 chr2 169202288 169202309 -81485545 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 169202526 169202554 -81485300 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 169202624 169202645 -81485209 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 169202713 169202750 -81485104 + AT_rich Low_complexity Low_complexity 1 37 0 1314 196 31 31 chr2 169202835 169203121 -81484733 + AluJo SINE Alu 4 289 -23 32807 36 3 1 chr2 169203595 169208425 -81479429 - L1PA2 LINE L1 0 6155 1316 570 334 158 55 chr2 169208549 169209632 -81478222 + L2 LINE L2 1471 2440 -832 898 247 5 27 chr2 169209632 169209855 -81477999 + MER20 DNA MER1_type 2 219 0 570 334 158 55 chr2 169209855 169209917 -81477937 + L2 LINE L2 2440 2494 -778 342 0 0 0 chr2 169209917 169209955 -81477899 + (CA)n Simple_repeat Simple_repeat 2 39 0 570 334 158 55 chr2 169209955 169210257 -81477597 + L2 LINE L2 2494 3077 -195 26 0 0 0 chr2 169210365 169210391 -81477463 + AT_rich Low_complexity Low_complexity 1 26 0 341 319 0 0 chr2 169210452 169210543 -81477311 - MIR SINE MIR -76 132 42 386 240 11 11 chr2 169211529 169211708 -81476146 + (TA)n Simple_repeat Simple_repeat 2 180 0 198 203 25 13 chr2 169211719 169211798 -81476056 + (TA)n Simple_repeat Simple_repeat 1 80 0 1990 176 161 8 chr2 169211979 169212456 -81475398 - MER44D DNA MER2_type 0 605 1 29 60 0 0 chr2 169213642 169213692 -81474162 + AT_rich Low_complexity Low_complexity 1 50 0 586 257 162 0 chr2 169214344 169214492 -81473362 + MER5A DNA MER1_type 12 183 -6 2137 114 0 3 chr2 169216189 169216478 -81471376 + AluSx SINE Alu 1 288 -24 309 151 0 0 chr2 169216478 169216531 -81471323 + (TA)n Simple_repeat Simple_repeat 2 54 0 790 196 0 35 chr2 169217143 169217316 -81470538 + MER3 DNA MER1_type 8 127 -82 698 268 48 64 chr2 169218693 169219007 -81468847 - L2 LINE L2 -1 3312 3004 1700 155 7 4 chr2 169219014 169219291 -81468563 + AluJo SINE Alu 29 306 -6 2197 115 3 13 chr2 169219674 169219987 -81467867 + AluSg SINE Alu 1 310 0 246 239 0 0 chr2 169220329 169220400 -81467454 + GA-rich Low_complexity Low_complexity 4 74 0 504 383 51 10 chr2 169220529 169220840 -81467014 - L2 LINE L2 0 3272 2949 28 29 0 0 chr2 169221445 169221480 -81466374 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr2 169222509 169222534 -81465320 + AT_rich Low_complexity Low_complexity 1 25 0 401 296 39 90 chr2 169222773 169223084 -81464770 + HAL1 LINE L1 1251 1545 -962 504 271 98 80 chr2 169223144 169223626 -81464228 + L1MEc LINE L1 531 1030 -5089 2231 135 0 3 chr2 169223626 169223937 -81463917 + AluSx SINE Alu 3 312 0 504 271 98 80 chr2 169223937 169224117 -81463737 + L1MEc LINE L1 1030 1205 -4914 252 331 24 5 chr2 169224325 169224542 -81463312 + L1MEc LINE L1 1486 1653 -861 2867 218 17 15 chr2 169224662 169225255 -81462599 + MER77 LTR ERV1 1 594 -11 503 131 28 11 chr2 169225488 169225506 -81462348 + GA-rich Low_complexity Low_complexity 1 17 -433 1992 120 0 0 chr2 169225506 169225773 -81462081 + AluSx SINE Alu 1 267 -45 503 131 28 11 chr2 169225773 169225931 -81461923 + GA-rich Low_complexity Low_complexity 17 450 0 320 364 57 60 chr2 169226219 169226535 -81461319 + L1MC/D LINE L1 113 427 -5692 463 286 8 8 chr2 169226665 169226798 -81461056 + L1MC/D LINE L1 593 725 -5394 673 313 92 33 chr2 169226854 169227400 -81460454 + L1MC/D LINE L1 4795 5372 -757 571 200 9 0 chr2 169227404 169227514 -81460340 + L1PA16 LINE L1 6038 6148 -18 309 276 11 9 chr2 169227803 169227948 -81459906 + L1MC/D LINE L1 5628 5773 -331 24 0 0 0 chr2 169228137 169228161 -81459693 + AT_rich Low_complexity Low_complexity 1 24 0 393 135 11 45 chr2 169228780 169228869 -81458985 + L1PB4 LINE L1 6071 6156 0 196 288 0 68 chr2 169229123 169229182 -81458672 - L2 LINE L2 -93 3220 3166 1017 276 99 21 chr2 169229501 169229981 -81457873 + MER34 LTR ERV1 2 565 -20 314 369 21 14 chr2 169230620 169230761 -81457093 + MIR SINE MIR 2 143 -119 21 0 0 0 chr2 169230790 169230811 -81457043 + AT_rich Low_complexity Low_complexity 1 21 0 7653 25 4 2 chr2 169230811 169232055 -81455799 - L1PA3 LINE L1 -3 6152 4908 13752 31 0 0 chr2 169232055 169233718 -81454136 + L1P LINE L1 3048 4710 -1436 250 231 0 0 chr2 169234671 169234723 -81453131 + (TTCA)n Simple_repeat Simple_repeat 2 53 0 22606 46 45 20 chr2 169236154 169239161 -81448693 - L1P LINE L1 -3064 3082 2 184 280 93 13 chr2 169239466 169239541 -81448313 + L2 LINE L2 2977 3057 -215 552 342 119 20 chr2 169239557 169240218 -81447636 + L2 LINE L2 2550 3271 -1 245 286 116 34 chr2 169240347 169240494 -81447360 - MLT1L LTR MaLR -237 378 220 1320 201 7 28 chr2 169240495 169240778 -81447076 - Charlie1a DNA MER1_type -910 545 269 770 256 18 31 chr2 169240912 169241139 -81446715 + MER58A DNA MER1_type 1 224 0 506 345 13 8 chr2 169241139 169241372 -81446482 - Charlie1a DNA MER1_type -1221 234 1 267 317 16 44 chr2 169241567 169241728 -81446126 - L1MEc LINE L1 -4619 1777 1620 2282 181 50 5 chr2 169241728 169242165 -81445689 - MSTB2 LTR MaLR 0 457 1 267 317 16 44 chr2 169242165 169242186 -81445668 - L1MEc LINE L1 -4776 1620 1600 234 306 89 42 chr2 169242423 169242828 -81445026 - L1MEc LINE L1 -4902 1303 880 24 106 0 0 chr2 169244395 169244489 -81443365 + AT_rich Low_complexity Low_complexity 1 94 0 29833 121 14 54 chr2 169244514 169247054 -81440800 - L1PA7 LINE L1 -2 6152 3513 1667 89 0 0 chr2 169247054 169247268 -81440586 - AluY SINE Alu 0 311 98 29833 121 14 54 chr2 169247268 169248562 -81439292 - L1PA7 LINE L1 -2641 3513 2169 180 77 0 0 chr2 169248562 169248588 -81439266 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 29833 121 14 54 chr2 169248588 169251157 -81436697 - L1PA7 LINE L1 -3985 2169 9 37 76 0 0 chr2 169251349 169251428 -81436426 + AT_rich Low_complexity Low_complexity 1 79 0 359 245 42 68 chr2 169252323 169252515 -81435339 + L1MC4a LINE L1 5773 5959 -1849 2433 108 25 0 chr2 169252517 169252878 -81434976 - L1PB1 LINE L1 -1 6150 5781 189 244 0 0 chr2 169253081 169253126 -81434728 - L2 LINE L2 0 3313 3269 1045 204 0 0 chr2 169254167 169254358 -81433496 + AluJb SINE Alu 119 309 -3 21 36 0 0 chr2 169255678 169255706 -81432148 + AT_rich Low_complexity Low_complexity 1 28 0 4407 221 40 58 chr2 169256277 169259178 -81428676 - L1MD1 LINE L1 0 6242 3394 1106 273 52 21 chr2 169259181 169259763 -81428091 - L1MD1 LINE L1 -2629 3517 2918 11348 204 12 9 chr2 169260058 169260464 -81427390 - L1PA15 LINE L1 -7 6809 6406 252 0 0 0 chr2 169260464 169260492 -81427362 + (TTCTCC)n Simple_repeat Simple_repeat 4 31 0 2079 114 0 7 chr2 169260493 169260774 -81427080 - AluSx SINE Alu -33 279 1 11348 204 12 9 chr2 169260774 169263689 -81424165 - L1PA15 LINE L1 -409 6407 3475 286 181 9 9 chr2 169263718 169263834 -81424020 + (TA)n Simple_repeat Simple_repeat 1 116 0 1918 156 0 10 chr2 169263859 169264147 -81423707 - AluSx SINE Alu -27 285 1 5408 214 30 23 chr2 169264147 169265637 -81422217 - L1PA15 LINE L1 -3323 3474 1959 6069 34 1 1 chr2 169265637 169266366 -81421488 - L1PA3 LINE L1 0 6155 5427 5408 214 30 23 chr2 169266366 169266797 -81421057 - L1PA15 LINE L1 -4838 1959 1532 2438 256 21 14 chr2 169267038 169267887 -81419967 - L1MD1 LINE L1 -3212 2934 2114 807 212 54 114 chr2 169269083 169269231 -81418623 + MSTD LTR MaLR 7 162 -234 2003 121 0 7 chr2 169269231 169269567 -81418287 + AluSx SINE Alu 3 336 0 807 212 54 114 chr2 169269567 169269827 -81418027 + MSTD LTR MaLR 162 396 0 501 309 104 29 chr2 169269910 169270256 -81417598 - L2 LINE L2 -1220 2094 1723 299 189 72 18 chr2 169270350 169270461 -81417393 - LTR37A LTR ERV1 -2 424 308 205 388 78 9 chr2 169270581 169270697 -81417157 + L2 LINE L2 3149 3272 0 314 314 29 20 chr2 169272040 169272198 -81415656 - MIR3 SINE MIR -66 142 7 1229 148 55 169 chr2 169274459 169274532 -81413322 - MLT1B LTR MaLR -1 389 309 228 35 0 0 chr2 169274532 169274561 -81413293 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 1229 148 55 169 chr2 169274561 169274926 -81412928 - MLT1B LTR MaLR -81 309 1 439 301 46 77 chr2 169275524 169275783 -81412071 - L2 LINE L2 0 3272 3022 182 282 0 0 chr2 169276279 169276318 -81411536 - L2 LINE L2 -18 3254 3216 543 273 147 17 chr2 169276438 169276669 -81411185 + MIR SINE MIR 1 261 -1 431 278 95 105 chr2 169276769 169277168 -81410686 - MLT1G3 LTR MaLR -2 553 156 294 87 0 0 chr2 169277208 169277254 -81410600 + (TC)n Simple_repeat Simple_repeat 2 47 0 247 248 82 78 chr2 169277309 169277515 -81410339 - MLT1H LTR MaLR -302 247 41 217 299 137 8 chr2 169277549 169277666 -81410188 - MIR SINE MIR -99 163 32 465 248 55 21 chr2 169277845 169277990 -81409864 + MIR SINE MIR 113 262 0 331 228 16 87 chr2 169278247 169278374 -81409480 + MER91B DNA MER1_type 8 125 -65 391 272 43 0 chr2 169278397 169278489 -81409365 + MER91B DNA MER1_type 91 186 -4 388 265 64 73 chr2 169278574 169278793 -81409061 + L2 LINE L2 2161 2377 -937 738 211 7 154 chr2 169279350 169279630 -81408224 - MER8 DNA MER2_type 0 239 1 247 390 50 66 chr2 169279741 169279982 -81407872 + L2 LINE L2 3035 3271 -1 2135 93 14 7 chr2 169280645 169280935 -81406919 + AluSp SINE Alu 22 313 0 439 324 0 27 chr2 169281071 169281256 -81406598 + L2 LINE L2 259 438 -2876 557 251 12 109 chr2 169281510 169281757 -81406097 - LTR41 LTR ERVL -78 695 473 29 60 0 0 chr2 169282104 169282154 -81405700 + AT_rich Low_complexity Low_complexity 1 50 0 335 321 38 76 chr2 169282177 169282414 -81405440 + MIR SINE MIR 5 232 -30 230 284 60 35 chr2 169282500 169282616 -81405238 + HAL1b LINE L1 339 457 -891 317 253 127 74 chr2 169282819 169283023 -81404831 - L1ME4a LINE L1 0 6121 5929 1949 137 82 23 chr2 169283023 169283365 -81404489 - THE1B LTR MaLR -2 362 1 11300 105 6 0 chr2 169283365 169284935 -81402919 - THE1B-int LTR MaLR 0 1580 1 2191 102 73 14 chr2 169284935 169285279 -81402575 - THE1B LTR MaLR 0 364 1 317 253 127 74 chr2 169285279 169285301 -81402553 - L1ME4a LINE L1 -191 5930 5881 7212 213 97 46 chr2 169285330 169286786 -81401068 - L1MC1 LINE L1 -1 6612 5232 2467 54 0 19 chr2 169286786 169287101 -81400753 + AluY SINE Alu 1 309 -2 7212 213 97 46 chr2 169287101 169289113 -81398741 - L1MC1 LINE L1 -1381 5232 3325 2008 149 136 0 chr2 169289113 169289488 -81398366 - MSTB LTR MaLR 0 426 1 7212 213 97 46 chr2 169289488 169291050 -81396804 - L1MC1 LINE L1 -3288 3325 1845 203 61 30 0 chr2 169291050 169291083 -81396771 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7212 213 97 46 chr2 169291083 169291233 -81396621 - L1MC1 LINE L1 -4768 1845 1704 2235 68 0 0 chr2 169291233 169291511 -81396343 - AluY SINE Alu 0 311 34 7212 213 97 46 chr2 169291511 169292291 -81395563 - L1MC1 LINE L1 -4909 1704 19 863 268 78 31 chr2 169292293 169292778 -81395076 - L1M4 LINE L1 -1744 4402 3895 2922 268 67 20 chr2 169292806 169293518 -81394336 - L1M4 LINE L1 -2364 3782 3105 2267 103 3 7 chr2 169293518 169293828 -81394026 - AluSx SINE Alu 0 312 4 2922 268 67 20 chr2 169293828 169294543 -81393311 - L1M4 LINE L1 -3041 3105 2288 659 120 0 0 chr2 169294558 169294658 -81393196 - L1MA2 LINE L1 0 6304 6205 5842 110 29 19 chr2 169294658 169294670 -81393184 - L1MA2 LINE L1 -1 6303 6293 6739 115 29 14 chr2 169294670 169295722 -81392132 - MER11C LTR ERVK -4 1067 1 5842 110 29 19 chr2 169295722 169296544 -81391310 - L1MA2 LINE L1 -11 6293 5361 7545 117 12 6 chr2 169296560 169297766 -81390088 - L1P LINE L1 -2307 3839 2627 4930 96 63 7 chr2 169297867 169298640 -81389214 - L1P3 LINE L1 -2946 3515 2699 * 7715 91 124 2 chr2 169298620 169299767 -81388087 - L1P3 LINE L1 -5174 1287 1 722 328 46 28 chr2 169299771 169300231 -81387623 - L1MCc LINE L1 -4978 1445 978 607 284 64 64 chr2 169300288 169300728 -81387126 - L1MCc LINE L1 -5970 453 14 365 221 62 41 chr2 169300747 169300892 -81386962 - L1ME4a LINE L1 -260 5861 5714 24 32 0 0 chr2 169300953 169300984 -81386870 + AT_rich Low_complexity Low_complexity 1 31 0 447 251 9 7 chr2 169301143 169301272 -81386582 + L1MC/D LINE L1 5667 5796 -368 218 309 73 0 chr2 169302140 169302208 -81385646 + L2 LINE L2 3227 3299 -14 2331 100 0 3 chr2 169302611 169302922 -81384932 - AluSg SINE Alu 0 310 1 1540 189 7 27 chr2 169302945 169303246 -81384608 - AluJb SINE Alu -14 298 4 21 0 0 0 chr2 169303566 169303587 -81384267 + AT_rich Low_complexity Low_complexity 1 21 0 33 43 0 0 chr2 169304803 169304850 -81383004 + AT_rich Low_complexity Low_complexity 1 47 0 501 302 39 0 chr2 169305895 169306081 -81381773 + MIR SINE MIR 37 230 -32 223 254 45 73 chr2 169306417 169306527 -81381327 + L3 LINE CR1 579 685 -892 377 301 9 9 chr2 169306807 169307026 -81380828 - L1ME LINE L1 -5136 934 716 23 0 0 0 chr2 169307226 169307249 -81380605 + AT_rich Low_complexity Low_complexity 1 23 0 238 257 29 0 chr2 169308245 169308315 -81379539 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 384 232 56 49 chr2 169309118 169309260 -81378594 - MIR SINE MIR -56 206 64 820 210 72 5 chr2 169309285 169309480 -81378374 + MER3 DNA MER1_type 1 208 -1 180 158 0 0 chr2 169312529 169312567 -81375287 + CT-rich Low_complexity Low_complexity 1 38 0 2290 241 56 50 chr2 169313051 169313803 -81374051 - MER21B LTR ERV1 -107 756 1 1785 147 65 10 chr2 169314221 169314540 -81373314 + AluJb SINE Alu 5 339 0 183 184 0 0 chr2 169316676 169316714 -81371140 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 2189 121 0 7 chr2 169316893 169317198 -81370656 + AluSx SINE Alu 1 303 -9 2268 114 3 0 chr2 169317372 169317679 -81370175 - AluSx SINE Alu -4 308 1 961 230 38 8 chr2 169317964 169318203 -81369651 + MIR SINE MIR 15 260 -2 387 0 0 0 chr2 169319711 169319754 -81368100 + (TG)n Simple_repeat Simple_repeat 2 44 0 193 356 0 0 chr2 169320688 169320747 -81367107 - L2 LINE L2 -4 3309 3251 22 56 0 0 chr2 169324335 169324371 -81363483 + AT_rich Low_complexity Low_complexity 1 36 0 384 275 168 0 chr2 169324410 169324559 -81363295 + MIR SINE MIR 45 218 -44 2360 213 6 27 chr2 169325222 169325738 -81362116 - MLT1D LTR MaLR 0 505 1 535 283 132 28 chr2 169326509 169326721 -81361133 + MIR SINE MIR 25 258 -4 243 234 45 36 chr2 169326963 169327074 -81360780 - L1 LINE L1 -1131 5015 4904 303 267 78 120 chr2 169327138 169327329 -81360525 + L2 LINE L2 3004 3186 -86 25 65 0 0 chr2 169327414 169327460 -81360394 + AT_rich Low_complexity Low_complexity 1 46 0 326 310 20 82 chr2 169328116 169328361 -81359493 - HAL1b LINE L1 -914 434 205 25 51 0 0 chr2 169329826 169329865 -81357989 + AT_rich Low_complexity Low_complexity 1 39 0 267 356 56 0 chr2 169330091 169330181 -81357673 + MIR SINE MIR 50 144 -64 2390 35 0 7 chr2 169330386 169330669 -81357185 - AluY SINE Alu -30 281 1 22 0 0 0 chr2 169330878 169330900 -81356954 + AT_rich Low_complexity Low_complexity 1 22 0 186 271 34 0 chr2 169331962 169332021 -81355833 + MIR3 SINE MIR 147 207 -1 322 366 59 0 chr2 169332336 169332522 -81355332 + MIR SINE MIR 66 262 0 487 248 112 90 chr2 169333044 169333159 -81354695 + MIR SINE MIR 1 112 -150 2181 98 27 3 chr2 169333159 169333456 -81354398 - AluSc SINE Alu -5 304 1 487 248 112 90 chr2 169333456 169333602 -81354252 + MIR SINE MIR 112 262 0 213 94 0 0 chr2 169334016 169334048 -81353806 + (GA)n Simple_repeat Simple_repeat 1 32 0 234 325 156 7 chr2 169334590 169334744 -81353110 - MIR3 SINE MIR -9 199 23 328 316 93 46 chr2 169335248 169335485 -81352369 - MIR SINE MIR -6 256 9 949 97 8 0 chr2 169336014 169336138 -81351716 + AluSq/x SINE Alu 8 132 -181 518 43 14 0 chr2 169336139 169336208 -81351646 + (GGAA)n Simple_repeat Simple_repeat 4 73 0 544 151 0 28 chr2 169336322 169336428 -81351426 + AluSg/x SINE Alu 198 300 -9 2177 117 0 7 chr2 169336500 169336799 -81351055 - AluSg SINE Alu -13 297 1 6111 17 0 2 chr2 169337876 169339036 -81348818 + L1PA2 LINE L1 4803 5960 -195 258 277 15 0 chr2 169339142 169339207 -81348647 + MIR SINE MIR 107 172 -90 222 324 32 70 chr2 169341086 169341164 -81346690 + MIR SINE MIR 13 92 -170 825 224 53 6 chr2 169341164 169341334 -81346520 + MER45A DNA AcHobo 1 178 0 222 324 32 70 chr2 169341334 169341440 -81346414 + MIR SINE MIR 92 190 -72 425 162 54 0 chr2 169341696 169341770 -81346084 - MER63 DNA MER1_type -91 745 42 957 308 0 0 chr2 169341851 169342101 -81345753 + MIR SINE MIR 7 256 -6 2015 88 48 0 chr2 169342792 169343064 -81344790 + AluSp SINE Alu 1 285 -28 23 68 0 0 chr2 169343478 169343522 -81344332 + AT_rich Low_complexity Low_complexity 1 44 0 719 210 6 6 chr2 169344561 169344723 -81343131 - L1MB7 LINE L1 -12 6172 6011 1013 221 118 76 chr2 169345600 169345922 -81341932 - MSTD LTR MaLR 0 396 54 1717 155 3 44 chr2 169345922 169346218 -81341636 - AluJb SINE Alu -26 286 3 1013 221 118 76 chr2 169346218 169346275 -81341579 - MSTD LTR MaLR -342 54 1 188 313 62 10 chr2 169348632 169348728 -81339126 + MER5B DNA MER1_type 60 160 -18 1690 114 7 73 chr2 169349099 169349388 -81338466 + AluJo SINE Alu 21 290 -22 599 318 58 73 chr2 169353326 169353789 -81334065 + LTR67 LTR ERVL 102 557 0 238 329 68 0 chr2 169354248 169354321 -81333533 + L2 LINE L2 3231 3308 -5 523 258 102 6 chr2 169354371 169354538 -81333316 - MIR SINE MIR -61 201 19 363 346 61 43 chr2 169354899 169355179 -81332675 - L2 LINE L2 -446 2868 2584 24 0 0 0 chr2 169356076 169356100 -81331754 + AT_rich Low_complexity Low_complexity 1 24 0 208 281 31 31 chr2 169356153 169356217 -81331637 + L2 LINE L2 3209 3272 0 459 116 35 12 chr2 169356757 169356843 -81331011 - L1PB4 LINE L1 -1 6155 6068 202 383 67 38 chr2 169357177 169357417 -81330437 - L2 LINE L2 -20 3252 3006 472 195 168 27 chr2 169359064 169359213 -81328641 - Charlie8 DNA MER1_type -2228 189 20 195 262 66 16 chr2 169359607 169359668 -81328186 + L2 LINE L2 3230 3293 -20 252 0 0 0 chr2 169360409 169360437 -81327417 + (CAAT)n Simple_repeat Simple_repeat 3 30 0 1547 200 109 54 chr2 169360804 169361283 -81326571 + MLT1D LTR MaLR 1 505 0 2083 118 0 10 chr2 169361669 169361966 -81325888 + AluSg SINE Alu 1 294 -16 275 158 53 0 chr2 169362963 169363020 -81324834 - L1ME4a LINE L1 -1 6120 6061 812 169 0 0 chr2 169363183 169363307 -81324547 - FLAM_C SINE Alu -19 124 1 244 221 13 26 chr2 169375285 169375362 -81312492 + (TA)n Simple_repeat Simple_repeat 1 76 0 743 208 25 84 chr2 169376088 169376290 -81311564 - MER58A DNA MER1_type 0 224 35 999 333 81 19 chr2 169376530 169377151 -81310703 + L2 LINE L2 1914 2572 -742 488 326 64 33 chr2 169377414 169377930 -81309924 - HAL1b LINE L1 -755 593 62 207 170 0 125 chr2 169377940 169378052 -81309802 + T-rich Low_complexity Low_complexity 2 99 0 207 139 0 0 chr2 169380025 169380061 -81307793 + (GGAA)n Simple_repeat Simple_repeat 2 37 0 1535 209 42 24 chr2 169382123 169382506 -81305348 - MLT1B LTR MaLR 0 390 1 2387 88 41 6 chr2 169382964 169383328 -81304526 - L1MA1 LINE L1 -4 6298 5922 1983 171 32 5 chr2 169383679 169384058 -81303796 - MLT1B LTR MaLR 0 390 2 242 351 53 15 chr2 169385677 169385808 -81302046 + LTR16A LTR ERVL 16 151 -299 807 210 98 29 chr2 169385839 169386044 -81301810 + LTR16A LTR ERVL 227 445 -5 411 295 73 15 chr2 169386051 169386348 -81301506 + HERV16 LTR ERVL 3 359 -4637 207 161 0 0 chr2 169386510 169386541 -81301313 + (TTG)n Simple_repeat Simple_repeat 3 33 0 544 230 174 59 chr2 169386600 169386870 -81300984 - MLT1H LTR MaLR -110 439 139 201 178 0 0 chr2 169388067 169388112 -81299742 + (TG)n Simple_repeat Simple_repeat 2 46 0 422 368 81 16 chr2 169388457 169388840 -81299014 + L2 LINE L2 2151 2558 -756 2251 112 42 22 chr2 169388921 169389277 -81298577 + THE1B LTR MaLR 2 364 0 11320 91 6 31 chr2 169389277 169390898 -81296956 + THE1B-int LTR MaLR 1 1580 0 1801 176 48 20 chr2 169390898 169391250 -81296604 + THE1B LTR MaLR 1 362 -2 360 357 23 8 chr2 169391252 169391381 -81296473 + L2 LINE L2 3142 3272 0 220 286 24 8 chr2 169391712 169391838 -81296016 + (TA)n Simple_repeat Simple_repeat 2 129 0 349 288 8 20 chr2 169392156 169392305 -81295549 - MIR SINE MIR -59 203 57 292 312 0 16 chr2 169392504 169392629 -81295225 + (TATATG)n Simple_repeat Simple_repeat 2 124 0 281 263 59 25 chr2 169392926 169393044 -81294810 - MIR SINE MIR -70 192 71 208 323 23 15 chr2 169393215 169393348 -81294506 + (TA)n Simple_repeat Simple_repeat 2 135 0 281 305 85 0 chr2 169394673 169394791 -81293063 - MIR SINE MIR -71 191 64 1093 253 82 19 chr2 169395144 169395511 -81292343 - MLT1J2 LTR MaLR -25 425 36 2396 51 0 42 chr2 169395568 169395881 -81291973 - AluY SINE Alu -11 300 1 3044 34 18 8 chr2 169446987 169447369 -81240485 - L1PA5 LINE L1 0 6154 5769 360 0 0 0 chr2 169448230 169448270 -81239584 + (CA)n Simple_repeat Simple_repeat 2 41 0 212 343 0 0 chr2 169448529 169448599 -81239255 - MIR SINE MIR -109 153 84 613 286 132 29 chr2 169449228 169449508 -81238346 - MLT1G1 LTR MaLR 0 595 287 423 0 0 0 chr2 169451952 169451999 -81235855 + (TG)n Simple_repeat Simple_repeat 2 48 0 333 242 63 11 chr2 169453278 169453373 -81234481 - L2 LINE L2 -5 3267 3168 1865 102 0 4 chr2 169453574 169453842 -81234012 + AluSg SINE Alu 39 305 0 395 196 125 18 chr2 169454042 169454154 -81233700 + L2 LINE L2 3183 3306 -7 303 287 50 40 chr2 169454516 169454617 -81233237 - MIR3 SINE MIR -24 184 83 576 334 128 25 chr2 169454920 169455576 -81232278 - L2 LINE L2 -3 3310 2577 363 78 0 0 chr2 169455576 169455627 -81232227 + (TG)n Simple_repeat Simple_repeat 1 51 0 576 334 128 25 chr2 169455627 169455643 -81232211 - L2 LINE L2 -736 2577 2564 207 0 0 0 chr2 169456106 169456129 -81231725 + (T)n Simple_repeat Simple_repeat 1 23 0 575 268 73 38 chr2 169456806 169457258 -81230596 + L1MC5 LINE L1 7447 7914 -47 25 0 0 0 chr2 169457434 169457459 -81230395 + AT_rich Low_complexity Low_complexity 1 25 0 740 225 6 19 chr2 169457627 169457787 -81230067 - FRAM SINE Alu -8 158 1 3764 139 6 19 chr2 169458166 169458813 -81229041 + L1MC1 LINE L1 5693 6331 -2 2189 129 0 0 chr2 169460064 169460374 -81227480 - AluSg SINE Alu 0 310 1 12928 178 45 17 chr2 169460378 169461040 -81226814 - L1M1 LINE L1 -725 6280 5638 207 0 0 0 chr2 169461040 169461063 -81226791 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1992 131 0 0 chr2 169461066 169461348 -81226506 - AluSx SINE Alu -30 282 1 12928 178 45 17 chr2 169461348 169463162 -81224692 - L1M1 LINE L1 -1368 5637 3685 1957 150 10 0 chr2 169463162 169463469 -81224385 - AluSx SINE Alu 0 312 3 12928 178 45 17 chr2 169463469 169464056 -81223798 - L1M1 LINE L1 -3320 3685 3116 9946 196 77 34 chr2 169464030 169464683 -81223171 - L1M1 LINE L1 -4249 2600 1976 * 1678 183 0 11 chr2 169464683 169464967 -81222887 + AluJo SINE Alu 1 281 -31 9946 196 77 34 chr2 169464967 169466626 -81221228 - L1M1 LINE L1 -4873 1976 190 1334 278 27 27 chr2 169467404 169467807 -81220047 + HAL1 LINE L1 4 406 -2101 203 256 0 0 chr2 169467873 169467916 -81219938 - MIR SINE MIR -100 108 66 793 78 0 0 chr2 169469644 169469746 -81218108 - MER57B LTR ERV1 -331 103 2 3635 112 22 4 chr2 169469749 169470303 -81217551 - MER41B LTR ERV1 -71 564 1 195 69 0 0 chr2 169471087 169471116 -81216738 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 317 117 17 0 chr2 169471705 169471765 -81216089 + (CA)n Simple_repeat Simple_repeat 1 61 0 325 299 163 23 chr2 169472909 169473210 -81214644 + L1ME LINE L1 4911 5253 -893 471 310 105 22 chr2 169473223 169473608 -81214246 + L1ME LINE L1 5378 5795 -367 2244 113 3 0 chr2 169474195 169474505 -81213349 + AluSx SINE Alu 1 311 -1 2205 107 0 0 chr2 169475261 169475559 -81212295 - AluSx SINE Alu -14 298 1 354 219 30 3 chr2 169476041 169476122 -81211732 - MER5A DNA MER1_type 0 189 96 3441 122 56 8 chr2 169476145 169476751 -81211103 + L1MA4 LINE L1 5660 6294 -6 661 254 22 0 chr2 169476757 169476895 -81210959 - MER5A DNA MER1_type -48 141 1 22 0 0 0 chr2 169477244 169477266 -81210588 + AT_rich Low_complexity Low_complexity 1 22 0 197 313 0 0 chr2 169477795 169477843 -81210011 + MER5A DNA MER1_type 6 53 -136 2293 75 7 3 chr2 169478250 169478542 -81209312 + AluSc SINE Alu 1 293 -16 40 59 0 0 chr2 169479928 169479996 -81207858 + AT_rich Low_complexity Low_complexity 1 68 0 195 184 0 0 chr2 169480297 169480335 -81207519 + (CATA)n Simple_repeat Simple_repeat 1 38 0 232 225 14 14 chr2 169480538 169480609 -81207245 + (TA)n Simple_repeat Simple_repeat 1 71 0 25 31 0 0 chr2 169480698 169480730 -81207124 + AT_rich Low_complexity Low_complexity 1 32 0 2503 67 0 0 chr2 169482703 169483003 -81204851 + AluSc SINE Alu 1 300 -9 22 0 0 0 chr2 169483645 169483667 -81204187 + AT_rich Low_complexity Low_complexity 1 22 0 2147 86 13 10 chr2 169484604 169484907 -81202947 - AluY SINE Alu -7 304 1 192 40 0 0 chr2 169485053 169485078 -81202776 + (A)n Simple_repeat Simple_repeat 1 25 0 27 29 0 0 chr2 169485194 169485228 -81202626 + AT_rich Low_complexity Low_complexity 1 34 0 27 0 0 0 chr2 169485299 169485326 -81202528 + AT_rich Low_complexity Low_complexity 1 27 0 1192 253 52 44 chr2 169485399 169486860 -81200994 + L1M4 LINE L1 3775 5347 -799 1105 175 6 0 chr2 169486947 169487130 -81200724 - AluSx SINE Alu -126 186 3 17118 189 22 11 chr2 169487133 169492274 -81195580 - L1PA16 LINE L1 -11 6858 1625 1959 114 36 65 chr2 169492274 169492660 -81195194 - THE1C LTR MaLR 0 375 1 17118 189 22 11 chr2 169492660 169494093 -81193761 - L1PA16 LINE L1 -5244 1625 210 198 0 0 0 chr2 169494960 169494982 -81192872 + (A)n Simple_repeat Simple_repeat 1 22 0 303 264 115 6 chr2 169495602 169495784 -81192070 + L1MDb LINE L1 1116 1317 -5092 2019 149 0 0 chr2 169496028 169496323 -81191531 + AluSx SINE Alu 3 297 -15 2268 119 0 7 chr2 169496954 169497264 -81190590 + AluSx SINE Alu 3 310 -2 183 309 48 48 chr2 169499404 169499488 -81188366 - MIR SINE MIR -118 144 61 239 192 0 19 chr2 169499682 169499734 -81188120 - L2 LINE L2 -1 3312 3262 192 220 102 17 chr2 169500322 169500381 -81187473 - L2 LINE L2 -70 3202 3139 27 0 0 0 chr2 169500739 169500766 -81187088 + AT_rich Low_complexity Low_complexity 1 27 0 225 94 0 0 chr2 169501404 169501436 -81186418 + (TG)n Simple_repeat Simple_repeat 2 33 0 400 320 99 35 chr2 169502589 169502815 -81185039 + MIR SINE MIR 16 252 -10 21 82 0 0 chr2 169502820 169502869 -81184985 + AT_rich Low_complexity Low_complexity 1 49 0 223 389 51 25 chr2 169503374 169503649 -81184205 + L2 LINE L2 3020 3301 -12 4059 170 23 12 chr2 169503731 169504456 -81183398 + MER44D DNA MER2_type 1 605 0 291 297 10 94 chr2 169504805 169504997 -81182857 + MIR SINE MIR 38 213 -49 2413 99 0 0 chr2 169505633 169505945 -81181909 + AluSx SINE Alu 1 312 0 2212 104 3 31 chr2 169506595 169506913 -81180941 - AluSc SINE Alu 0 309 1 192 40 0 0 chr2 169506915 169506940 -81180914 + (T)n Simple_repeat Simple_repeat 1 25 0 1137 145 6 6 chr2 169507041 169507220 -81180634 - L1PA15-16 LINE L1 -6669 180 2 1857 168 24 7 chr2 169507243 169507541 -81180313 - AluJb SINE Alu -7 305 3 409 308 58 23 chr2 169507607 169507779 -81180075 + MER5B DNA MER1_type 1 178 0 202 222 19 0 chr2 169508459 169508513 -81179341 + CT-rich Low_complexity Low_complexity 3 57 0 240 167 0 0 chr2 169508615 169508663 -81179191 + CT-rich Low_complexity Low_complexity 2 49 0 546 200 27 0 chr2 169509086 169509316 -81178538 + L1MA4A LINE L1 5989 6274 -17 205 333 15 0 chr2 169509588 169509654 -81178200 + L2 LINE L2 2945 3011 -261 236 339 122 65 chr2 169511329 169511683 -81176171 + L2 LINE L2 2885 3258 -14 291 352 0 0 chr2 169511785 169511893 -81175961 - MIR SINE MIR -124 138 31 192 40 0 0 chr2 169513194 169513219 -81174635 + (CATAT)n Simple_repeat Simple_repeat 4 28 0 631 206 22 56 chr2 169514817 169514997 -81172857 + MER5B DNA MER1_type 5 178 0 936 180 12 0 chr2 169515947 169516119 -81171735 + AluJb SINE Alu 137 310 -2 206 143 0 48 chr2 169516862 169516904 -81170950 + L2 LINE L2 3164 3203 -110 207 0 0 0 chr2 169516974 169516997 -81170857 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 233 302 36 79 chr2 169517930 169518069 -81169785 + L2 LINE L2 3173 3305 -8 25 0 0 0 chr2 169518971 169518996 -81168858 + AT_rich Low_complexity Low_complexity 1 25 0 2547 53 3 0 chr2 169519134 169519437 -81168417 + AluY SINE Alu 1 304 -7 22 0 0 0 chr2 169519456 169519478 -81168376 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 169520080 169520111 -81167743 + AT_rich Low_complexity Low_complexity 1 31 0 1447 213 23 104 chr2 169520927 169521369 -81166485 + MLT1D-int LTR MaLR 961 1366 -5 2118 200 45 59 chr2 169521370 169521875 -81165979 + MLT1D LTR MaLR 8 505 0 279 0 0 0 chr2 169522715 169522746 -81165108 + (TG)n Simple_repeat Simple_repeat 2 32 0 35 54 0 0 chr2 169522773 169522829 -81165025 + AT_rich Low_complexity Low_complexity 1 56 0 288 209 0 29 chr2 169523369 169523474 -81164380 + CT-rich Low_complexity Low_complexity 3 104 0 25 51 0 0 chr2 169525539 169525578 -81162276 + AT_rich Low_complexity Low_complexity 1 39 0 1205 304 82 27 chr2 169525863 169526343 -81161511 - HAL1 LINE L1 -600 1907 1372 372 59 0 0 chr2 169526343 169526394 -81161460 + (TG)n Simple_repeat Simple_repeat 2 52 0 1205 304 82 27 chr2 169526394 169526628 -81161226 - HAL1 LINE L1 -1135 1372 1153 288 180 40 0 chr2 169526683 169526733 -81161121 + LTR50 LTR ERVL 100 151 -644 655 301 71 4 chr2 169528686 169528925 -81158929 - MIR SINE MIR -2 260 6 3488 72 9 0 chr2 169529207 169529668 -81158186 - L1PA5 LINE L1 0 6154 5690 426 270 145 64 chr2 169529722 169530143 -81157711 + L3 LINE CR1 914 1380 -197 2035 156 65 29 chr2 169530143 169530560 -81157294 - MSTB1 LTR MaLR 0 432 1 426 270 145 64 chr2 169530560 169530620 -81157234 + L3 LINE CR1 1380 1434 -143 22 88 0 0 chr2 169532205 169532262 -81155592 + AT_rich Low_complexity Low_complexity 1 57 0 439 269 60 7 chr2 169532310 169532459 -81155395 + L1ME3A LINE L1 4960 5116 -1030 * 3509 182 30 16 chr2 169532457 169533134 -81154720 + L1MA4 LINE L1 2 687 -4641 9246 166 43 26 chr2 169533134 169534196 -81153658 + L1MA4 LINE L1 2782 3824 -2504 552 15 0 0 chr2 169534196 169534261 -81153593 + (CA)n Simple_repeat Simple_repeat 2 66 0 9246 166 43 26 chr2 169534261 169535282 -81152572 + L1MA4 LINE L1 3824 4901 -1427 2961 193 0 0 chr2 169535316 169535903 -81151951 - L1P LINE L1 -4382 1764 1178 5689 47 5 24 chr2 169535904 169536402 -81151452 + L1PA8 LINE L1 5438 5919 -253 2189 79 45 0 chr2 169536402 169536692 -81151162 + AluY SINE Alu 1 303 -8 5689 47 5 24 chr2 169536692 169536941 -81150913 + L1PA8 LINE L1 5919 6171 -1 3953 141 60 57 chr2 169537239 169537404 -81150450 + L1MA4 LINE L1 5203 5366 -1116 269 26 0 26 chr2 169537404 169537443 -81150411 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3953 141 60 57 chr2 169537443 169538259 -81149595 + L1MA4 LINE L1 5366 6204 -278 1669 265 109 14 chr2 169538430 169539358 -81148496 + L1ME3A LINE L1 5136 6160 -10 436 277 78 55 chr2 169539395 169539922 -81147932 - L1M4 LINE L1 -3354 2792 2254 833 212 35 35 chr2 169540166 169540397 -81147457 - MER39 LTR ERV1 0 707 477 215 402 0 11 chr2 169540445 169540532 -81147322 + MIR SINE MIR 20 105 -103 341 283 156 61 chr2 169541151 169541270 -81146584 - MIR SINE MIR -11 251 145 2243 159 83 5 chr2 169541270 169541665 -81146189 + MSTC LTR MaLR 1 426 -2 5002 288 86 33 chr2 169541665 169543309 -81144545 + MSTC-int LTR MaLR 2 1733 -2 2408 147 33 19 chr2 169543311 169543733 -81144121 + MSTC LTR MaLR 1 428 0 341 283 156 61 chr2 169543733 169543789 -81144065 - MIR SINE MIR -117 145 55 298 106 0 0 chr2 169544880 169544927 -81142927 - AluSp/q SINE Alu -4 299 253 851 99 0 0 chr2 169544927 169545038 -81142816 - AluSq/x SINE Alu -202 111 1 194 316 94 17 chr2 169545602 169545719 -81142135 - L2 LINE L2 -12 3301 3176 680 224 33 81 chr2 169547333 169547543 -81140311 - MER3 DNA MER1_type -3 206 7 408 222 11 11 chr2 169548163 169548253 -81139601 + MLT1A2 LTR MaLR 26 115 -250 355 233 8 8 chr2 169548253 169548373 -81139481 + GA-rich Low_complexity Low_complexity 2 121 0 195 218 0 0 chr2 169548396 169548451 -81139403 + CT-rich Low_complexity Low_complexity 2 56 0 998 201 20 15 chr2 169548452 169548651 -81139203 + MLT1A2 LTR MaLR 175 374 0 296 222 167 0 chr2 169550035 169550125 -81137729 + L2 LINE L2 3206 3310 -3 1910 128 0 7 chr2 169551950 169552231 -81135623 - AluSx SINE Alu -11 301 23 269 276 69 11 chr2 169552264 169552351 -81135503 + L2 LINE L2 3181 3272 0 1120 267 87 15 chr2 169552431 169552843 -81135011 + L1ME3A LINE L1 5529 5970 -200 1463 189 12 0 chr2 169553227 169553471 -81134383 - AluJo SINE Alu -26 286 40 1978 125 0 11 chr2 169554083 169554362 -81133492 + AluSx SINE Alu 15 290 -22 25 0 0 0 chr2 169554570 169554595 -81133259 + AT_rich Low_complexity Low_complexity 1 25 0 2554 58 0 7 chr2 169554674 169554984 -81132870 + AluY SINE Alu 1 308 -3 24 32 0 0 chr2 169555240 169555271 -81132583 + AT_rich Low_complexity Low_complexity 1 31 0 491 304 134 9 chr2 169555304 169555528 -81132326 + MIR SINE MIR 3 254 -8 1460 282 136 19 chr2 169555556 169556437 -81131417 - L2 LINE L2 -2 3311 2338 1973 170 80 5 chr2 169557215 169557591 -81130263 + MSTA LTR MaLR 25 428 0 3222 148 50 34 chr2 169557596 169558240 -81129614 + L1MA4A LINE L1 5638 6291 -12 30 0 0 0 chr2 169558523 169558553 -81129301 + AT_rich Low_complexity Low_complexity 1 30 0 186 286 63 0 chr2 169559042 169559105 -81128749 - MIR SINE MIR -83 179 113 340 271 182 0 chr2 169559695 169559865 -81127989 + Tigger8 DNA MER2_type 192 392 -274 30 27 0 0 chr2 169560442 169560479 -81127375 + AT_rich Low_complexity Low_complexity 1 37 0 1982 143 3 3 chr2 169562344 169562637 -81125217 + AluSx SINE Alu 7 299 -13 268 303 131 23 chr2 169562878 169563053 -81124801 + MIR SINE MIR 69 262 0 2001 98 22 4 chr2 169564476 169564782 -81123072 - AluSg1 SINE Alu 0 311 1 1177 283 132 0 chr2 169565942 169566306 -81121548 - LTR16C LTR ERVL 0 491 80 302 304 77 26 chr2 169570157 169570430 -81117424 - L1MDb LINE L1 -4086 2501 2215 297 277 72 30 chr2 169570874 169571166 -81116688 - L1MDb LINE L1 -4915 1481 1162 251 234 48 57 chr2 169571318 169571442 -81116412 - L1MC4 LINE L1 0 8042 7920 414 318 123 40 chr2 169572204 169572506 -81115348 + L2 LINE L2 2837 3163 -150 23 54 0 0 chr2 169572982 169573019 -81114835 + AT_rich Low_complexity Low_complexity 1 37 0 294 296 22 80 chr2 169574555 169574781 -81113073 + MIR SINE MIR 48 260 -2 24 32 0 0 chr2 169576336 169576367 -81111487 + AT_rich Low_complexity Low_complexity 1 31 0 740 286 56 47 chr2 169576488 169576936 -81110918 - L1ME4a LINE L1 -222 5899 5448 458 359 50 27 chr2 169576969 169577267 -81110587 + L3 LINE CR1 399 703 -874 490 264 96 38 chr2 169577290 169577582 -81110272 + L1MC4a LINE L1 5598 5906 -1902 2173 231 50 0 chr2 169577659 169578101 -81109753 + MLT2B1 LTR ERVL 1 464 -56 299 105 18 0 chr2 169578134 169578191 -81109663 + (TC)n Simple_repeat Simple_repeat 1 58 0 316 157 0 28 chr2 169578191 169578260 -81109594 + MLT2D LTR ERVL 366 412 -2 577 232 0 40 chr2 169578261 169578412 -81109442 + ERVL-D LTR ERVL 2 146 -5618 2428 206 44 40 chr2 169578533 169579076 -81108778 + ERVL-D LTR ERVL 332 876 -4888 420 20 0 0 chr2 169579139 169579188 -81108666 + (TG)n Simple_repeat Simple_repeat 2 50 0 1361 186 73 0 chr2 169579189 169579437 -81108417 - MLT2B1 LTR ERVL -254 266 1 22 35 0 0 chr2 169579546 169579575 -81108279 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 169580192 169580215 -81107639 + AT_rich Low_complexity Low_complexity 1 23 0 236 158 70 0 chr2 169580642 169580699 -81107155 - L1ME LINE L1 -222 5899 5839 246 250 79 0 chr2 169580799 169580875 -81106979 - L1ME LINE L1 -454 5667 5586 1919 132 11 4 chr2 169580974 169581282 -81106572 + AluSx SINE Alu 1 310 0 182 259 37 62 chr2 169631673 169631754 -81056100 - L3 LINE CR1 -73 1504 1426 185 321 57 19 chr2 169633549 169633602 -81054252 + L2 LINE L2 3193 3247 -25 198 118 0 0 chr2 169633613 169633647 -81054207 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 942 231 49 7 chr2 169633712 169633998 -81053856 - MER33 DNA MER1_type 0 324 27 297 0 0 0 chr2 169634486 169634519 -81053335 + (TA)n Simple_repeat Simple_repeat 1 33 0 329 316 60 40 chr2 169634560 169635029 -81052825 - L1ME LINE L1 -1333 4813 4336 292 250 250 10 chr2 169635071 169635175 -81052679 - MIR SINE MIR -73 189 61 413 319 0 0 chr2 169635839 169635952 -81051902 + MER117 DNA MER1_type 85 197 0 275 308 112 0 chr2 169635952 169636059 -81051795 - MIR3 SINE MIR -48 160 42 650 258 129 45 chr2 169636798 169637131 -81050723 + L2 LINE L2 2953 3313 0 256 392 70 0 chr2 169637383 169637554 -81050300 - L3b LINE CR1 -105 1478 1296 2950 110 22 10 chr2 169638471 169638971 -81048883 - SVA Other Other -659 727 222 8480 39 8 2 chr2 169638971 169640797 -81047057 + L1PA3 LINE L1 4318 6150 -5 278 328 60 26 chr2 169640865 169640981 -81046873 - MIR3 SINE MIR -51 157 38 372 381 45 6 chr2 169641173 169641349 -81046505 + MER5A DNA MER1_type 1 183 -6 6702 188 51 19 chr2 169641841 169644731 -81043123 - L1MC1 LINE L1 0 6333 3353 258 266 35 35 chr2 169645092 169645205 -81042649 - MER103 DNA DNA -20 146 34 473 312 102 14 chr2 169649055 169649270 -81038584 - L3 LINE CR1 -525 1052 819 599 308 33 14 chr2 169649279 169649493 -81038361 + MIR SINE MIR 31 248 -14 1083 299 48 6 chr2 169649601 169649952 -81037902 - L3 LINE CR1 -779 798 433 288 102 0 0 chr2 169650789 169650838 -81037016 + (T)n Simple_repeat Simple_repeat 1 49 0 182 362 43 0 chr2 169651632 169651701 -81036153 + MIR3 SINE MIR 89 160 -48 21 0 0 0 chr2 169653600 169653621 -81034233 + AT_rich Low_complexity Low_complexity 1 21 0 267 209 0 0 chr2 169653642 169653685 -81034169 + MER5B DNA MER1_type 2 44 -134 273 75 0 0 chr2 169653699 169653739 -81034115 + (T)n Simple_repeat Simple_repeat 1 40 0 4027 187 67 17 chr2 169658697 169659500 -81028354 - MER21B LTR ERV1 -20 843 1 1581 279 105 20 chr2 169659596 169660435 -81027419 + L1ME3A LINE L1 5254 6157 -13 2291 97 0 0 chr2 169660591 169660890 -81026964 - AluY SINE Alu -12 299 1 309 222 58 105 chr2 169661606 169661777 -81026077 - MIR SINE MIR -5 257 95 478 249 119 34 chr2 169662730 169663027 -81024827 - L1ME LINE L1 -522 5599 5290 24 32 0 0 chr2 169663070 169663101 -81024753 + AT_rich Low_complexity Low_complexity 1 31 0 874 82 8 8 chr2 169663110 169663244 -81024610 + (TTCC)n Simple_repeat Simple_repeat 3 136 0 1666 175 10 20 chr2 169663245 169663537 -81024317 - AluJo SINE Alu -23 289 1 22 35 0 0 chr2 169663997 169664026 -81023828 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 169664039 169664068 -81023786 + AT_rich Low_complexity Low_complexity 1 29 0 2626 50 0 0 chr2 169664356 169664658 -81023196 + AluY SINE Alu 1 302 -9 855 133 13 27 chr2 169664658 169664808 -81023046 + L1PA11 LINE L1 6024 6171 -3 632 315 52 14 chr2 169665250 169665536 -81022318 - L2 LINE L2 -1 3312 3016 1717 276 130 20 chr2 169665578 169665751 -81022103 - L2 LINE L2 -417 2897 2744 1609 179 7 14 chr2 169665751 169666064 -81021790 - AluJo SINE Alu 0 311 1 198 71 0 0 chr2 169666069 169666097 -81021757 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1717 276 130 20 chr2 169666097 169666561 -81021293 - L2 LINE L2 -573 2741 2182 320 306 124 12 chr2 169667327 169667657 -81020197 + L1MC4a LINE L1 5543 5909 -1899 28 0 0 0 chr2 169667899 169667927 -81019927 + AT_rich Low_complexity Low_complexity 1 28 0 1951 147 23 0 chr2 169668922 169669222 -81018632 + AluSx SINE Alu 1 307 -5 320 355 117 9 chr2 169670659 169670881 -81016973 + MIR SINE MIR 3 254 -8 358 296 86 37 chr2 169671179 169671341 -81016513 - MIR3 SINE MIR -1 207 38 2307 98 0 10 chr2 169671397 169671704 -81016150 - AluY SINE Alu -7 304 1 235 185 19 19 chr2 169672566 169672620 -81015234 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 354 245 78 88 chr2 169673259 169673451 -81014403 - MIR3 SINE MIR -2 206 17 2375 197 14 71 chr2 169674646 169675285 -81012569 - L1MB8 LINE L1 0 6178 5573 1967 109 41 0 chr2 169675347 169675639 -81012215 - AluSc SINE Alu 0 303 1 271 263 53 13 chr2 169675872 169675948 -81011906 - MIR SINE MIR -87 175 97 434 278 53 20 chr2 169676215 169676366 -81011488 - MIR SINE MIR -87 175 20 357 212 0 81 chr2 169678025 169678124 -81009730 + MIR SINE MIR 106 196 -66 771 308 76 26 chr2 169679890 169680312 -81007542 - MLT1G1 LTR MaLR -15 580 138 296 315 111 22 chr2 169680368 169680549 -81007305 - MIR SINE MIR -32 230 34 335 284 142 43 chr2 169682000 169682141 -81005713 - MLT1J2 LTR MaLR -249 201 47 180 77 0 0 chr2 169682144 169682170 -81005684 + (TG)n Simple_repeat Simple_repeat 1 26 0 565 303 172 20 chr2 169683985 169684375 -81003479 - MLT1L LTR MaLR 0 615 167 1260 119 68 0 chr2 169685578 169685797 -81002057 + L1PA15 LINE L1 5932 6165 0 37 0 0 0 chr2 169685832 169685869 -81001985 + AT_rich Low_complexity Low_complexity 1 37 0 261 0 0 0 chr2 169687002 169687031 -81000823 + (TTA)n Simple_repeat Simple_repeat 2 30 0 474 284 43 23 chr2 169687767 169688066 -80999788 + L1ME4a LINE L1 5593 5897 -224 28 29 0 0 chr2 169688066 169688101 -80999753 + AT_rich Low_complexity Low_complexity 1 35 0 236 323 10 0 chr2 169688642 169688741 -80999113 + L1M4 LINE L1 4100 4199 -1947 829 191 57 81 chr2 169689005 169689288 -80998566 - LTR37A LTR ERV1 -133 293 18 5096 158 19 14 chr2 169689771 169690661 -80997193 - MER4D LTR ERV1 -8 895 1 201 328 15 0 chr2 169691109 169691176 -80996678 + L2 LINE L2 3201 3268 -4 2351 101 3 0 chr2 169691551 169691858 -80995996 + AluSc SINE Alu 1 308 -1 2068 87 15 0 chr2 169691913 169692179 -80995675 + AluSc SINE Alu 1 270 -39 28 71 0 0 chr2 169692433 169692489 -80995365 + AT_rich Low_complexity Low_complexity 1 56 0 345 330 30 66 chr2 169693756 169693953 -80993901 + L2 LINE L2 3083 3272 0 312 304 13 19 chr2 169694064 169694087 -80993767 - L1MA10 LINE L1 -14 6320 6298 1238 209 47 0 chr2 169694087 169694365 -80993489 - L1ME2 LINE L1 -27 6137 5847 1096 273 62 90 chr2 169696008 169696190 -80991664 - MER77 LTR ERV1 -28 577 392 1764 144 107 3 chr2 169696190 169696517 -80991337 - MER46B DNA MER2_type 0 236 1 1096 273 62 90 chr2 169696517 169696983 -80990871 - MER77 LTR ERV1 -213 392 54 317 302 0 93 chr2 169697742 169697800 -80990054 - MIR SINE MIR -69 139 98 2135 111 7 3 chr2 169697800 169698097 -80989757 + AluSg SINE Alu 1 298 -12 317 302 0 93 chr2 169698097 169698167 -80989687 - MIR SINE MIR -110 98 23 306 230 243 7 chr2 169698471 169698623 -80989231 - MIR3 SINE MIR -2 206 19 1181 228 98 25 chr2 169698761 169699056 -80988798 + MLT1J LTR MaLR 101 430 -81 474 75 0 0 chr2 169699056 169699123 -80988731 + (TG)n Simple_repeat Simple_repeat 1 67 0 1181 228 98 25 chr2 169699123 169699195 -80988659 + MLT1J LTR MaLR 430 495 -16 218 213 160 0 chr2 169699613 169699688 -80988166 - MIR SINE MIR -81 181 95 1059 261 113 7 chr2 169701215 169701621 -80986233 - MLT1J2 LTR MaLR 0 450 2 282 406 35 0 chr2 169701898 169702041 -80985813 + MER91A DNA MER1_type 1 148 -48 266 254 0 17 chr2 169702108 169702167 -80985687 + MER91A DNA MER1_type 133 190 0 395 232 66 122 chr2 169702504 169702685 -80985169 + MIR3 SINE MIR 32 202 -6 22 35 0 0 chr2 169702795 169702824 -80985030 + AT_rich Low_complexity Low_complexity 1 29 0 368 262 95 36 chr2 169703720 169703888 -80983966 - MIR3 SINE MIR -13 195 18 696 308 63 4 chr2 169704435 169704672 -80983182 + MIR SINE MIR 1 251 -11 289 197 91 0 chr2 169707255 169707321 -80980533 - MIR SINE MIR -73 189 118 35034 46 2 2 chr2 169708707 169713036 -80974818 + L1P LINE L1 5 4332 -1814 5985 80 6 71 chr2 169713036 169714049 -80973805 - SVA Other Other -1 1385 439 2396 78 0 3 chr2 169715569 169715864 -80971990 + AluY SINE Alu 1 294 -17 4197 205 12 9 chr2 169715868 169716747 -80971107 - L1MC2 LINE L1 -37 6307 5426 225 0 0 0 chr2 169716914 169716939 -80970915 + (TG)n Simple_repeat Simple_repeat 2 26 0 258 366 69 11 chr2 169717811 169717986 -80969868 - MER5A DNA MER1_type -4 185 1 28 29 0 0 chr2 169718251 169718286 -80969568 + AT_rich Low_complexity Low_complexity 1 35 0 266 28 28 0 chr2 169718348 169718384 -80969470 + AluY SINE Alu 256 292 -9 22 35 0 0 chr2 169718737 169718766 -80969088 + AT_rich Low_complexity Low_complexity 1 29 0 190 255 66 85 chr2 169718848 169718954 -80968900 - MER5A DNA MER1_type -25 164 61 2379 82 7 0 chr2 169719363 169719668 -80968186 - AluSp SINE Alu -6 307 1 297 239 28 0 chr2 169720584 169720655 -80967199 - L2 LINE L2 -16 3297 3225 1360 213 16 75 chr2 169720671 169720986 -80966868 + MLT1A1 LTR MaLR 1 292 -73 934 26 0 0 chr2 169720986 169721099 -80966755 + L1PA4 LINE L1 6039 6151 -4 1360 213 16 75 chr2 169721099 169721159 -80966695 + MLT1A1 LTR MaLR 292 354 -11 479 332 55 30 chr2 169721227 169721462 -80966392 - L2 LINE L2 -179 3134 2894 212 182 0 23 chr2 169724003 169724047 -80963807 + (TG)n Simple_repeat Simple_repeat 1 43 0 30 45 0 0 chr2 169725372 169725416 -80962438 + AT_rich Low_complexity Low_complexity 1 44 0 225 0 0 0 chr2 169725760 169725785 -80962069 + (A)n Simple_repeat Simple_repeat 1 25 0 212 213 85 0 chr2 169726104 169726151 -80961703 - L2 LINE L2 -1 3271 3221 1916 129 153 47 chr2 169726462 169726799 -80961055 - MSTA LTR MaLR 0 428 43 2338 100 3 0 chr2 169726799 169727110 -80960744 + AluSq SINE Alu 1 312 -1 1916 129 153 47 chr2 169727110 169727159 -80960695 - MSTA LTR MaLR -385 43 1 530 249 42 37 chr2 169728622 169728677 -80959177 + L1MC4a LINE L1 5742 5795 -2013 1873 180 39 0 chr2 169728677 169729011 -80958843 + MER7A DNA MER2_type 1 345 -1 530 249 42 37 chr2 169729011 169729172 -80958682 + L1MC4a LINE L1 5795 5959 -1849 28 48 0 0 chr2 169729326 169729368 -80958486 + AT_rich Low_complexity Low_complexity 1 42 0 2158 103 7 0 chr2 169729820 169730110 -80957744 + AluSx SINE Alu 1 292 -20 2266 91 3 7 chr2 169731264 169731560 -80956294 + AluSc SINE Alu 4 298 -11 1537 188 61 17 chr2 169731883 169732229 -80955625 - MLT1A1 LTR MaLR 0 365 5 2436 76 0 19 chr2 169732267 169732584 -80955270 - AluY SINE Alu 0 311 1 276 202 119 12 chr2 169733030 169733114 -80954740 - L2 LINE L2 -842 2472 2380 902 289 131 41 chr2 169733319 169734090 -80953764 - L2 LINE L2 -13 3300 2465 187 235 82 35 chr2 169734666 169734751 -80953103 - L2 LINE L2 -847 2467 2379 1234 266 6 12 chr2 169735513 169735833 -80952021 - L2 LINE L2 -840 2474 2157 2116 129 38 30 chr2 169736093 169736465 -80951389 + THE1C LTR MaLR 1 375 0 231 214 225 11 chr2 169736547 169736636 -80951218 + L1ME4a LINE L1 5979 6086 -35 526 193 102 96 chr2 169736777 169736964 -80950890 - L2 LINE L2 -21 3292 3105 740 272 55 3 chr2 169737009 169737321 -80950533 - L1M4 LINE L1 -2022 4124 3797 357 195 0 67 chr2 169737367 169737487 -80950367 + L1MC4 LINE L1 1996 6983 -1339 1517 181 4 29 chr2 169737494 169737771 -80950083 - AluJb SINE Alu -26 286 17 48 32 0 0 chr2 169737786 169737848 -80950006 + AT_rich Low_complexity Low_complexity 1 62 0 316 256 69 64 chr2 169737857 169738060 -80949794 + L1MC5 LINE L1 7242 7445 -516 281 289 0 31 chr2 169738071 169738168 -80949686 + L1M4 LINE L1 4031 4124 -2022 323 215 65 9 chr2 169738304 169738411 -80949443 + L1MC5 LINE L1 7603 7715 -246 2291 99 0 3 chr2 169738748 169739050 -80948804 - AluY SINE Alu -10 301 1 28 48 0 0 chr2 169739057 169739099 -80948755 + AT_rich Low_complexity Low_complexity 1 42 0 593 222 153 0 chr2 169739277 169739453 -80948401 - LTR50 LTR ERVL -590 205 3 245 358 149 8 chr2 169739521 169739655 -80948199 + MIR SINE MIR 1 153 -109 222 363 102 62 chr2 169741073 169741329 -80946525 + L2 LINE L2 2586 2851 -463 * 548 271 55 55 chr2 169741319 169741537 -80946317 + MIR SINE MIR 30 247 -15 201 200 40 0 chr2 169741547 169741597 -80946257 + (TTG)n Simple_repeat Simple_repeat 2 53 0 189 0 0 0 chr2 169741794 169741815 -80946039 + (TA)n Simple_repeat Simple_repeat 2 22 0 287 319 0 0 chr2 169743032 169743101 -80944753 - tRNA-Ile-ATT tRNA tRNA -3 74 6 240 323 15 0 chr2 169743708 169743773 -80944081 + tRNA-Ile-ATT tRNA tRNA 9 74 -3 23 0 0 0 chr2 169744252 169744275 -80943579 + AT_rich Low_complexity Low_complexity 1 23 0 1723 148 97 0 chr2 169744633 169744911 -80942943 + AluSx SINE Alu 1 305 -7 7905 122 16 5 chr2 169744952 169746166 -80941688 - HSMAR2 DNA Mariner -7 1295 68 412 301 103 24 chr2 169746235 169746574 -80941280 - L1ME4a LINE L1 -257 5864 5499 243 93 0 0 chr2 169746820 169746863 -80940991 + LTR66 LTR ERVL 394 436 -174 1999 131 3 7 chr2 169748270 169748568 -80939286 - AluSx SINE Alu -15 297 1 402 304 46 17 chr2 169748605 169748845 -80939009 - L1MC4a LINE L1 -1883 5925 5679 281 294 0 0 chr2 169748861 169748929 -80938925 - L1MC4a LINE L1 -504 5617 5550 204 212 188 24 chr2 169749179 169749264 -80938590 - L3b LINE CR1 -286 1297 1199 592 321 59 53 chr2 169749642 169750116 -80937738 - L1MC4a LINE L1 -1907 5884 5408 36 70 0 0 chr2 169750223 169750294 -80937560 + AT_rich Low_complexity Low_complexity 1 71 0 2336 223 49 38 chr2 169750306 169750463 -80937391 - L1MC3 LINE L1 -722 7063 6909 1397 172 88 44 chr2 169750463 169750760 -80937094 - AluJo SINE Alu 0 312 3 2336 223 49 38 chr2 169750760 169751310 -80936544 - L1MC3 LINE L1 -876 6909 6348 359 279 82 0 chr2 169751610 169751768 -80936086 - L1ME4a LINE L1 -1 6120 5950 460 356 92 26 chr2 169752941 169753308 -80934546 + L2 LINE L2 2746 3134 -179 324 326 69 21 chr2 169753354 169753498 -80934356 + MIR SINE MIR 20 170 -92 1980 330 139 22 chr2 169753723 169755153 -80932701 + L2 LINE L2 1714 3313 0 267 392 70 0 chr2 169755405 169755576 -80932278 - L3b LINE CR1 -105 1478 1296 346 205 54 18 chr2 169756760 169756899 -80930955 - L1MC4a LINE L1 -708 5426 5285 198 118 0 0 chr2 169757245 169757279 -80930575 + (CA)n Simple_repeat Simple_repeat 2 35 0 969 232 187 61 chr2 169757408 169757556 -80930298 - L1MC4a LINE L1 -1779 4350 4222 2310 101 3 0 chr2 169757556 169757862 -80929992 - AluSp SINE Alu -6 307 1 969 232 187 61 chr2 169757862 169758316 -80929538 - L1MC4a LINE L1 -1907 4222 3672 515 292 75 35 chr2 169758492 169759090 -80928764 - L1MEd LINE L1 -4657 1653 987 395 296 177 14 chr2 169759561 169759781 -80928073 - MIR SINE MIR -6 256 1 224 263 118 0 chr2 169759986 169760062 -80927792 - MER91B DNA MER1_type -103 87 3 1945 121 59 0 chr2 169760619 169760908 -80926946 - AluSx SINE Alu -6 306 1 181 230 0 46 chr2 169760967 169761054 -80926800 + GA-rich Low_complexity Low_complexity 4 86 0 2078 137 51 11 chr2 169761730 169762080 -80925774 - THE1B LTR MaLR 0 364 1 204 243 24 136 chr2 169762217 169762386 -80925468 + L2 LINE L2 2385 2534 -780 1876 140 13 3 chr2 169762524 169762824 -80925030 - AluSx SINE Alu -9 303 1 192 228 0 0 chr2 169763059 169763116 -80924738 + (TA)n Simple_repeat Simple_repeat 2 58 0 36 0 0 0 chr2 169764513 169764549 -80923305 + AT_rich Low_complexity Low_complexity 1 36 0 559 255 153 6 chr2 169764994 169765151 -80922703 + MER5A DNA MER1_type 10 189 0 23 0 0 0 chr2 169766825 169766848 -80921006 + AT_rich Low_complexity Low_complexity 1 23 0 530 296 160 29 chr2 169768519 169768938 -80918916 - MLT1L LTR MaLR -15 600 127 2010 134 3 7 chr2 169768990 169769295 -80918559 - AluSx SINE Alu -6 306 3 623 188 48 105 chr2 169769515 169769744 -80918110 - LTR12 LTR ERV1 -251 463 248 357 247 82 27 chr2 169769893 169770039 -80917815 + L1 LINE L1 4357 4510 -1636 296 161 16 0 chr2 169770464 169770526 -80917328 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 2496 152 75 37 chr2 169770758 169771277 -80916577 + L1MA8 LINE L1 5753 6291 0 904 253 20 33 chr2 169771343 169771588 -80916266 - MIR SINE MIR 0 262 21 238 228 101 13 chr2 169771871 169771950 -80915904 + L1ME LINE L1 5546 5631 -490 1905 131 29 0 chr2 169772038 169772337 -80915517 + AluSx SINE Alu 1 307 0 963 258 79 72 chr2 169772561 169773170 -80914684 - MLT1L LTR MaLR -2 613 1 286 319 78 60 chr2 169773296 169773462 -80914392 - MIR3 SINE MIR -5 203 35 3047 222 113 14 chr2 169773892 169774818 -80913036 - L1MD3 LINE L1 -8 8028 7024 319 237 92 61 chr2 169774976 169775107 -80912747 + L2 LINE L2 3152 3286 -27 388 348 80 26 chr2 169775423 169775736 -80912118 - L2 LINE L2 0 3313 2984 295 331 43 49 chr2 169775932 169776095 -80911759 - L2 LINE L2 -426 2888 2727 1189 204 57 37 chr2 169776149 169776394 -80911460 - MER82 DNA MER2_type -14 639 390 1832 167 13 3 chr2 169776705 169777005 -80910849 - AluJb SINE Alu -9 303 1 2547 63 0 118 chr2 169777209 169777634 -80910220 + THE1C LTR MaLR 1 375 0 627 329 167 22 chr2 169777762 169778212 -80909642 + MLT1L LTR MaLR 93 607 -8 432 209 0 0 chr2 169778242 169778328 -80909526 + HsTC2 DNA Tc2 2 87 -1811 251 150 0 0 chr2 169778302 169778342 -80909512 + HsTC2 DNA Tc2 1856 1895 -3 * 5324 64 26 3 chr2 169778669 169779385 -80908469 + L1PA7 LINE L1 5422 6154 0 195 320 48 48 chr2 169779622 169779747 -80908107 - L2 LINE L2 -222 3050 2926 503 297 169 0 chr2 169780079 169780274 -80907580 - MIR SINE MIR -30 232 5 414 0 0 0 chr2 169781566 169781612 -80906242 + (TA)n Simple_repeat Simple_repeat 2 47 0 529 294 2 2 chr2 169781842 169782033 -80905821 - L1MC4a LINE L1 -1211 6597 6433 266 254 15 30 chr2 169782642 169782709 -80905145 + L2 LINE L2 3161 3226 -46 3478 218 8 48 chr2 169782819 169783804 -80904050 - L1ME1 LINE L1 -41 6125 5180 445 268 14 21 chr2 169785686 169785828 -80902026 + MIR SINE MIR 82 222 -40 385 283 72 78 chr2 169785880 169786396 -80901458 + L1MC4 LINE L1 7517 8029 -13 222 217 17 17 chr2 169786517 169786577 -80901277 + CT-rich Low_complexity Low_complexity 2 61 0 325 172 17 0 chr2 169787112 169787170 -80900684 - U7 snRNA snRNA -3 60 2 210 71 0 0 chr2 169787391 169787419 -80900435 + (T)n Simple_repeat Simple_repeat 1 28 0 6920 62 0 0 chr2 169787430 169788704 -80899150 - L1PA7 LINE L1 0 6154 4878 18831 89 130 13 chr2 169788704 169791710 -80896144 + L1PA7 LINE L1 1523 4878 -1268 4971 60 0 5 chr2 169791998 169792632 -80895222 + L1PA7 LINE L1 5524 6154 0 2790 143 30 2 chr2 169792994 169793468 -80894386 - L1MA4A LINE L1 -3 6300 5814 367 225 62 12 chr2 169794486 169794566 -80893288 + MIR SINE MIR 47 130 -78 284 316 7 29 chr2 169796241 169796377 -80891477 + Charlie8 DNA MER1_type 20 152 -2265 427 269 21 21 chr2 169796881 169797022 -80890832 + L2 LINE L2 1790 1930 -1384 486 308 29 0 chr2 169797029 169797201 -80890653 + MIR SINE MIR 86 262 0 981 276 138 13 chr2 169797232 169797616 -80890238 + L2 LINE L2 1960 2391 -923 218 250 0 36 chr2 169798139 169798195 -80889659 + L2 LINE L2 3003 3056 -257 319 98 0 0 chr2 169798222 169798263 -80889591 + Alu SINE Alu 2 42 -260 430 255 66 80 chr2 169798316 169798528 -80889326 + L2 LINE L2 3105 3313 0 2554 68 0 0 chr2 169800126 169800434 -80887420 + AluY SINE Alu 2 309 -2 2201 117 0 28 chr2 169801180 169801497 -80886357 - AluSx SINE Alu -4 308 1 280 281 73 0 chr2 169801679 169801775 -80886079 - MIR3 SINE MIR -9 199 97 190 337 74 31 chr2 169803197 169803360 -80884494 + L2 LINE L2 2227 2396 -918 1294 97 0 0 chr2 169803412 169803597 -80884257 - L1MA1 LINE L1 0 6302 6118 1856 176 31 21 chr2 169804923 169805309 -80882545 - L1MB5 LINE L1 -8 6166 5777 2061 233 21 21 chr2 169805310 169805890 -80881964 - L1MB5 LINE L1 -1763 4383 3804 1586 205 61 22 chr2 169805942 169806352 -80881502 - L1MB5 LINE L1 -2280 3866 3441 324 0 0 0 chr2 169806862 169806898 -80880956 + (TG)n Simple_repeat Simple_repeat 1 36 0 412 234 0 43 chr2 169807193 169807287 -80880567 - L2 LINE L2 -1 3271 3182 287 344 21 0 chr2 169807958 169808054 -80879800 + MIR SINE MIR 48 145 -63 204 324 15 0 chr2 169808540 169808608 -80879246 + (TG)n Simple_repeat Simple_repeat 2 70 0 707 262 114 13 chr2 169809670 169809907 -80877947 + MIR SINE MIR 2 262 0 1605 203 20 7 chr2 169810116 169810421 -80877433 - AluJo SINE Alu -3 309 1 245 276 66 0 chr2 169812514 169812590 -80875264 - L2 LINE L2 -8 3264 3184 532 335 41 49 chr2 169812681 169813072 -80874782 - L2 LINE L2 -878 2436 2049 21 82 0 0 chr2 169813419 169813468 -80874386 + AT_rich Low_complexity Low_complexity 1 49 0 234 354 44 0 chr2 169813575 169813688 -80874166 + L3 LINE CR1 1312 1429 -148 426 304 14 58 chr2 169813708 169813915 -80873939 - L2 LINE L2 -11 3302 3105 219 321 71 60 chr2 169813930 169814114 -80873740 - L2 LINE L2 -1636 1678 1493 632 223 102 12 chr2 169814122 169814288 -80873566 - MER63A DNA MER1_type -29 181 1 394 222 10 10 chr2 169816420 169816519 -80871335 - HsTC2 DNA Tc2 -1796 102 4 808 223 53 10 chr2 169817108 169817314 -80870540 - MER20 DNA MER1_type -4 215 1 662 157 0 0 chr2 169817960 169818068 -80869786 - L1MC1 LINE L1 -18 6315 6208 1226 258 92 10 chr2 169818152 169818562 -80869292 + L2 LINE L2 2594 3036 -277 42096 37 24 2 chr2 169818581 169824600 -80863254 - L1PA3 LINE L1 0 6155 2 216 299 52 43 chr2 169824601 169824812 -80863042 + L2 LINE L2 3024 3236 -77 4632 248 91 10 chr2 169825380 169826585 -80861269 + L1M3c LINE L1 239 1540 -4601 3688 225 74 9 chr2 169826590 169827675 -80860179 + L1M3c LINE L1 2326 3480 -2730 804 248 39 10 chr2 169828172 169828378 -80859476 + MIR SINE MIR 36 247 -15 30 0 0 0 chr2 169829229 169829259 -80858595 + AT_rich Low_complexity Low_complexity 1 30 0 34 24 0 0 chr2 169830478 169830519 -80857335 + AT_rich Low_complexity Low_complexity 1 41 0 1770 235 135 50 chr2 169830912 169831632 -80856222 - MER20B DNA MER1_type 0 783 3 411 160 0 0 chr2 169832104 169832179 -80855675 + (CA)n Simple_repeat Simple_repeat 2 76 0 1671 128 98 0 chr2 169832195 169832460 -80855394 - AluSq SINE Alu -22 291 1 674 253 128 32 chr2 169832633 169832945 -80854909 + L1MA9 LINE L1 5933 6274 -38 2351 132 5 13 chr2 169833331 169833709 -80854145 - THE1C LTR MaLR 0 375 1 718 304 22 13 chr2 169833853 169834077 -80853777 - MIR SINE MIR 0 262 37 2461 82 0 6 chr2 169834727 169835042 -80852812 - AluSp SINE Alu 0 313 1 1076 83 0 0 chr2 169835042 169835175 -80852679 - AluSp SINE Alu -178 135 3 398 293 180 6 chr2 169835288 169835455 -80852399 + MIR SINE MIR 61 256 -6 180 0 0 0 chr2 169836030 169836050 -80851804 + (GA)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr2 169836869 169836892 -80850962 + AT_rich Low_complexity Low_complexity 1 23 0 344 296 9 35 chr2 169838160 169838275 -80849579 - MER5A DNA MER1_type -4 185 74 1664 173 36 0 chr2 169839070 169839347 -80848507 + AluJb SINE Alu 1 287 -25 189 0 0 0 chr2 169839370 169839391 -80848463 + (CA)n Simple_repeat Simple_repeat 2 22 0 533 360 39 42 chr2 169839546 169839879 -80847975 + L2 LINE L2 2941 3272 0 662 197 8 16 chr2 169840888 169841015 -80846839 - FLAM_A SINE Alu -7 126 1 557 318 87 4 chr2 169841160 169841402 -80846452 - L2 LINE L2 -338 2976 2715 248 304 104 44 chr2 169843731 169843866 -80843988 + MIR SINE MIR 18 160 -102 2219 178 52 34 chr2 169843879 169844475 -80843379 + L1MDa LINE L1 1074 1680 -4860 1986 161 53 23 chr2 169844727 169845162 -80842692 + L1MDa LINE L1 1681 2128 -4412 968 294 90 13 chr2 169845192 169845570 -80842284 - L2 LINE L2 -528 2786 2380 31 82 0 0 chr2 169845816 169845889 -80841965 + AT_rich Low_complexity Low_complexity 1 73 0 29 70 0 0 chr2 169845985 169846042 -80841812 + AT_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr2 169846646 169846668 -80841186 + AT_rich Low_complexity Low_complexity 1 22 0 351 223 98 27 chr2 169847192 169847304 -80840550 + L2 LINE L2 3187 3306 -7 25 51 0 0 chr2 169848409 169848448 -80839406 + AT_rich Low_complexity Low_complexity 1 39 0 592 264 93 41 chr2 169849456 169849702 -80838152 - MLT1A1 LTR MaLR -5 550 292 * 830 179 46 7 chr2 169849697 169849848 -80838006 - MLT1A1 LTR MaLR -208 157 1 852 244 108 6 chr2 169849848 169850172 -80837682 + Charlie2 DNA MER1_type 1839 2195 -667 559 261 48 56 chr2 169850221 169850445 -80837409 - MLT1H1 LTR MaLR -276 273 11 778 310 63 22 chr2 169851441 169851760 -80836094 - MLT1J LTR MaLR -179 332 1 525 290 70 16 chr2 169851853 169852039 -80835815 + MIR SINE MIR 66 261 -1 468 285 21 7 chr2 169852497 169852641 -80835213 + MIR SINE MIR 102 247 -15 234 308 103 27 chr2 169854051 169854197 -80833657 - MIR3 SINE MIR -31 177 21 225 0 0 0 chr2 169855004 169855029 -80832825 + (T)n Simple_repeat Simple_repeat 1 25 0 2189 121 0 0 chr2 169855346 169855636 -80832218 - AluSq SINE Alu -23 290 1 1126 197 28 9 chr2 169855673 169855886 -80831968 + AluJb SINE Alu 85 301 -11 317 276 102 8 chr2 169856598 169856725 -80831129 - MIR SINE MIR 0 262 124 460 282 77 59 chr2 169858714 169858945 -80828909 - MIR SINE MIR -14 248 17 2479 63 0 0 chr2 169859523 169859826 -80828028 + AluY SINE Alu 1 303 -8 1015 151 117 6 chr2 169861415 169861594 -80826260 - MER3 DNA MER1_type -10 199 1 1710 214 107 66 chr2 169862393 169862953 -80824901 + MLT1G1 LTR MaLR 5 587 -8 1490 234 52 46 chr2 169862987 169863448 -80824406 - MLT1D LTR MaLR -41 464 1 2268 99 3 3 chr2 169864002 169864304 -80823550 + AluSp SINE Alu 1 302 -11 218 235 94 24 chr2 169865304 169865389 -80822465 - MIR SINE MIR -44 218 128 350 260 55 39 chr2 169865449 169865576 -80822278 + MIR SINE MIR 119 247 -15 360 268 0 12 chr2 169865965 169866047 -80821807 - MIR3 SINE MIR -12 196 116 821 289 205 18 chr2 169866358 169867040 -80820814 + L2 LINE L2 2458 3272 0 26 0 0 0 chr2 169867278 169867304 -80820550 + AT_rich Low_complexity Low_complexity 1 26 0 1707 186 0 10 chr2 169867308 169867603 -80820251 + AluSx SINE Alu 3 294 -18 21 36 0 0 chr2 169868954 169868982 -80818872 + AT_rich Low_complexity Low_complexity 1 28 0 1503 197 96 40 chr2 169871944 169872688 -80815166 - L1MDa LINE L1 -3634 2906 2122 207 167 0 0 chr2 169872813 169872855 -80814999 + CT-rich Low_complexity Low_complexity 2 43 0 1154 21 28 7 chr2 169872918 169873063 -80814791 - L1PA4 LINE L1 -2 6153 6006 728 311 119 35 chr2 169873066 169873644 -80814210 - L1ME4a LINE L1 -177 5944 5318 756 188 87 97 chr2 169874104 169874402 -80813452 - MER39 LTR ERV1 0 707 413 255 172 0 78 chr2 169874438 169874502 -80813352 - MER39 LTR ERV1 -425 282 224 2291 92 3 3 chr2 169875277 169875572 -80812282 + AluSg SINE Alu 3 297 -13 189 107 0 0 chr2 169876589 169876617 -80811237 + (TTG)n Simple_repeat Simple_repeat 2 29 0 384 158 20 10 chr2 169876633 169876734 -80811120 + CT-rich Low_complexity Low_complexity 1 102 0 23 54 0 0 chr2 169879076 169879113 -80808741 + AT_rich Low_complexity Low_complexity 1 37 0 2095 151 0 6 chr2 169879142 169879454 -80808400 - AluSx SINE Alu -2 310 1 1231 214 146 18 chr2 169880111 169880538 -80807316 - Charlie1 DNA MER1_type -6 2755 3 244 267 93 12 chr2 169881152 169881238 -80806616 - MIR3 SINE MIR -52 156 64 574 322 29 5 chr2 169882205 169882410 -80805444 - MIR SINE MIR -32 230 21 250 205 222 68 chr2 169882980 169883097 -80804757 - MLT1D LTR MaLR -370 135 1 557 203 23 23 chr2 169883097 169883230 -80804624 - MLT1D-int LTR MaLR 0 1371 1239 240 208 21 125 chr2 169883239 169883335 -80804519 - MLT1D-int LTR MaLR -107 1264 1179 1044 292 32 3 chr2 169883345 169883684 -80804170 - HsTC2 DNA Tc2 -1057 841 493 2063 114 4 4 chr2 169883728 169884008 -80803846 + AluSx SINE Alu 1 280 -32 289 234 194 0 chr2 169884307 169884431 -80803423 - L1ME4a LINE L1 -244 5877 5730 411 258 66 46 chr2 169886105 169886256 -80801598 - MIR SINE MIR -96 166 13 861 279 41 0 chr2 169886485 169886717 -80801137 - MIR SINE MIR -4 258 17 385 280 76 8 chr2 169886717 169886849 -80801005 + MIR SINE MIR 2 142 -120 555 253 169 0 chr2 169888492 169888658 -80799196 - MIR SINE MIR -2 260 67 1546 78 50 0 chr2 169888933 169889152 -80798702 - MER30 DNA MER1_type 0 230 1 243 355 81 16 chr2 169889208 169889332 -80798522 - MIR SINE MIR -73 189 58 476 271 111 17 chr2 169891307 169891488 -80796366 - MIR SINE MIR 0 262 65 212 167 21 0 chr2 169891515 169891563 -80796291 + GA-rich Low_complexity Low_complexity 3 51 0 431 335 57 26 chr2 169891574 169891768 -80796086 - MIR SINE MIR -35 227 28 1503 138 6 106 chr2 169892243 169892555 -80795299 + AluY SINE Alu 1 281 -30 416 307 178 5 chr2 169892794 169892996 -80794858 - MIR SINE MIR -11 251 15 242 343 0 0 chr2 169893004 169893074 -80794780 + L3 LINE CR1 522 591 -986 534 335 55 99 chr2 169893079 169893572 -80794282 + L3 LINE CR1 1070 1540 -37 183 237 75 75 chr2 169895276 169895369 -80792485 + L2 LINE L2 3221 3313 0 1634 187 0 27 chr2 169895432 169895773 -80792081 + AluJo SINE Alu 1 312 0 23 54 0 0 chr2 169896326 169896363 -80791491 + AT_rich Low_complexity Low_complexity 1 37 0 241 211 26 66 chr2 169896566 169896642 -80791212 + MLT1K LTR MaLR 176 248 -340 183 341 57 11 chr2 169896980 169897068 -80790786 - L2 LINE L2 -51 3262 3171 744 192 11 45 chr2 169897068 169897245 -80790609 + MER97a DNA MER1_type? 9 179 -715 558 284 138 31 chr2 169898602 169899187 -80788667 - L1ME3A LINE L1 -219 5951 5304 468 293 46 42 chr2 169899238 169899521 -80788333 - L1ME3A LINE L1 -2792 3354 3071 398 296 123 30 chr2 169899584 169900214 -80787640 - L1ME3A LINE L1 -3199 2947 2234 2234 91 14 0 chr2 169900214 169900511 -80787343 - AluSq SINE Alu -12 301 1 398 296 123 30 chr2 169900511 169900638 -80787216 - L1ME3A LINE L1 -3912 2234 2120 230 289 82 36 chr2 169901141 169901529 -80786325 - HAL1 LINE L1 -865 1642 1237 279 254 0 0 chr2 169904518 169904577 -80783277 - L2 LINE L2 -2 3270 3212 180 0 0 0 chr2 169906358 169906378 -80781476 + (A)n Simple_repeat Simple_repeat 1 20 0 1219 202 18 0 chr2 169906560 169906778 -80781076 - MER58A DNA MER1_type -2 222 1 206 205 0 0 chr2 169908193 169908232 -80779622 + C-rich Low_complexity Low_complexity 1 39 0 393 291 63 32 chr2 169909938 169910096 -80777758 - MER5A DNA MER1_type 0 189 27 23 0 0 0 chr2 169910452 169910475 -80777379 + AT_rich Low_complexity Low_complexity 1 23 0 1587 194 0 29 chr2 169911309 169911619 -80776235 + AluJo SINE Alu 1 301 -11 290 322 17 17 chr2 169912600 169912718 -80775136 + MIR SINE MIR 39 156 -106 243 210 37 37 chr2 169913066 169913147 -80774707 + L1PB4 LINE L1 6062 6142 -14 180 409 55 8 chr2 169913855 169913982 -80773872 + L2 LINE L2 3083 3215 -57 196 278 19 0 chr2 169914903 169914957 -80772897 + MIR SINE MIR 103 158 -50 183 267 33 17 chr2 169915060 169915120 -80772734 + MIR SINE MIR 188 248 -14 202 286 100 14 chr2 169917537 169917607 -80770247 + L2 LINE L2 3229 3304 -9 22 0 0 0 chr2 169918198 169918220 -80769634 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 169918730 169918767 -80769087 + AT_rich Low_complexity Low_complexity 1 37 0 1109 149 6 0 chr2 169919167 169919335 -80768519 + AluSg/x SINE Alu 135 303 -9 8175 110 32 5 chr2 169922000 169923263 -80764591 - HSMAR2 DNA Mariner -2 1300 4 2020 166 126 18 chr2 169923418 169923864 -80763990 - MLT2B1 LTR ERVL -26 494 1 2587 216 52 70 chr2 169925038 169925721 -80762133 - L1ME1 LINE L1 -9 6157 5463 216 0 0 0 chr2 169925721 169925745 -80762109 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 954 174 0 0 chr2 169925745 169925894 -80761960 - FRAM SINE Alu -17 149 1 2587 216 52 70 chr2 169925894 169926372 -80761482 - L1ME1 LINE L1 -701 5465 5023 401 258 113 38 chr2 169926635 169926848 -80761006 + MIR SINE MIR 4 232 -30 1887 89 96 31 chr2 169926931 169927222 -80760632 + AluSx SINE Alu 1 310 -2 644 324 42 13 chr2 169927918 169928156 -80759698 - MIR SINE MIR -13 249 5 218 159 58 43 chr2 169928860 169928929 -80758925 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 2570 71 0 0 chr2 169930109 169930419 -80757435 - AluSg SINE Alu 0 310 1 335 298 135 37 chr2 169930476 169930912 -80756942 + L1ME4a LINE L1 5371 5849 -272 2346 97 0 0 chr2 169930912 169931211 -80756643 + AluSg SINE Alu 1 299 -11 342 0 0 0 chr2 169931664 169931702 -80756152 + (CA)n Simple_repeat Simple_repeat 1 38 0 223 324 137 6 chr2 169931984 169932166 -80755688 + MIR SINE MIR 41 246 -16 2259 99 0 3 chr2 169932977 169933271 -80754583 - AluSx SINE Alu -19 293 1 1087 171 32 23 chr2 169933462 169933679 -80754175 + MER20 DNA MER1_type 1 219 0 23 33 0 0 chr2 169934013 169934043 -80753811 + AT_rich Low_complexity Low_complexity 1 30 0 764 174 7 0 chr2 169936481 169936625 -80751229 + L1MB5 LINE L1 6029 6173 -1 2077 142 3 3 chr2 169937356 169937665 -80750189 - AluSx SINE Alu -3 309 1 343 286 31 8 chr2 169940106 169940273 -80747581 + L1ME LINE L1 5602 5777 -346 266 363 18 0 chr2 169941844 169941957 -80745897 + MIR SINE MIR 88 202 -60 409 241 32 91 chr2 169942418 169942546 -80745308 - MER5B DNA MER1_type -1 177 62 183 42 0 0 chr2 169942546 169942570 -80745284 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 409 241 32 91 chr2 169942570 169942628 -80745226 - MER5B DNA MER1_type -116 62 2 502 286 101 0 chr2 169942771 169942939 -80744915 + MIR SINE MIR 20 204 -58 3590 107 23 21 chr2 169943825 169944350 -80743504 - MER1A DNA MER1_type 0 527 2 545 320 68 19 chr2 169944924 169945130 -80742724 + MIR SINE MIR 17 232 -30 209 227 0 0 chr2 169945156 169945200 -80742654 + (TAA)n Simple_repeat Simple_repeat 3 46 0 216 0 0 0 chr2 169945660 169945684 -80742170 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 962 194 68 10 chr2 169946687 169946893 -80740961 - MIR SINE MIR -7 255 38 204 457 36 7 chr2 169947887 169948027 -80739827 - L2 LINE L2 -6 3266 3123 238 387 31 40 chr2 169948226 169948451 -80739403 - L2 LINE L2 -493 2821 2599 23 0 0 0 chr2 169948482 169948505 -80739349 + AT_rich Low_complexity Low_complexity 1 23 0 340 294 89 33 chr2 169948623 169948803 -80739051 - MLT1L LTR MaLR -2 613 424 347 267 82 7 chr2 169948883 169949018 -80738836 - MLT1L LTR MaLR -325 290 146 2010 131 3 13 chr2 169952092 169952397 -80735457 + AluSx SINE Alu 1 302 -10 6697 82 14 0 chr2 169952592 169953326 -80734528 - L1PA11 LINE L1 -2 6172 5450 216 0 0 0 chr2 169953326 169953350 -80734504 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2175 100 14 0 chr2 169953350 169953629 -80734225 - AluY SINE Alu -28 283 1 6697 82 14 0 chr2 169953629 169954405 -80733449 - L1PA11 LINE L1 -723 5451 4657 235 279 16 0 chr2 169954572 169954633 -80733221 + L2 LINE L2 3245 3306 -7 1579 132 12 16 chr2 169954816 169955067 -80732787 - L1PB3 LINE L1 0 6154 5905 492 286 8 15 chr2 169955611 169955744 -80732110 + L2 LINE L2 3178 3309 -4 21 57 0 0 chr2 169958029 169958064 -80729790 + AT_rich Low_complexity Low_complexity 1 35 0 363 23 0 0 chr2 169958704 169958748 -80729106 + (CA)n Simple_repeat Simple_repeat 2 45 0 2007 118 21 0 chr2 169959636 169959916 -80727938 - AluSx SINE Alu -26 286 1 39840 38 9 0 chr2 169959953 169965508 -80722346 - L1PA4 LINE L1 0 6155 552 2037 120 17 3 chr2 169965963 169966254 -80721600 - AluSx SINE Alu -15 297 3 785 233 12 0 chr2 169966256 169966419 -80721435 - L1ME1 LINE L1 -57 6109 5945 764 171 5 93 chr2 169966419 169966624 -80721230 - AluSc SINE Alu 0 309 123 272 158 433 25 chr2 169966624 169966744 -80721110 - L1ME1 LINE L1 -232 5932 5764 463 299 0 0 chr2 169966911 169967008 -80720846 + MER81 DNA DNA 18 114 0 939 142 136 0 chr2 169967009 169967185 -80720669 - Cheshire DNA MER1_type -1392 1028 829 1670 169 38 0 chr2 169967186 169967476 -80720378 + AluSx SINE Alu 11 311 -1 309 273 182 71 chr2 169967551 169967726 -80720128 + L2 LINE L2 3013 3226 -87 1932 138 0 17 chr2 169967726 169968022 -80719832 + AluSx SINE Alu 4 294 -18 309 273 182 71 chr2 169968022 169968099 -80719755 + L2 LINE L2 3226 3293 -20 1343 114 0 19 chr2 169968327 169968538 -80719316 - AluSg SINE Alu -101 209 3 21 0 0 0 chr2 169968630 169968651 -80719203 + AT_rich Low_complexity Low_complexity 1 21 0 1823 96 4 0 chr2 169968795 169969034 -80718820 - AluSx SINE Alu -70 242 3 764 209 160 73 chr2 169969280 169969704 -80718150 + MLT1F1 LTR MaLR 68 557 -1 31238 49 10 0 chr2 169970073 169973876 -80713978 - L1P LINE L1 -2302 3844 3 207 154 0 0 chr2 169976398 169976431 -80711423 + (CA)n Simple_repeat Simple_repeat 2 35 0 192 40 0 0 chr2 169976431 169976456 -80711398 + (CCCCCA)n Simple_repeat Simple_repeat 3 27 0 2022 126 10 0 chr2 169977930 169978223 -80709631 + AluY SINE Alu 1 296 -15 518 266 49 49 chr2 169978305 169978489 -80709365 + MER63A DNA MER1_type 27 210 0 610 277 51 11 chr2 169978490 169978667 -80709187 + LTR16A LTR ERVL 239 422 -28 251 300 101 23 chr2 169980594 169980792 -80707062 + MIR SINE MIR 42 262 0 440 252 133 0 chr2 169980795 169980938 -80706916 - MIR SINE MIR 0 262 101 223 337 21 21 chr2 169981430 169981525 -80706329 + MIR SINE MIR 58 152 -56 626 256 26 112 chr2 169981597 169981910 -80705944 + MER102b DNA MER1_type 53 338 -3 326 104 21 0 chr2 169982453 169982501 -80705353 - L1PA10 LINE L1 -3 6165 6117 332 316 45 38 chr2 169982962 169983095 -80704759 + MIR3 SINE MIR 9 142 -66 335 250 87 58 chr2 169983611 169983783 -80704071 - L2 LINE L2 -92 3221 3045 844 273 67 64 chr2 169983816 169984175 -80703679 + MLT1I LTR MaLR 44 403 -6 2382 99 7 0 chr2 169984881 169985184 -80702670 - AluSq SINE Alu -8 305 1 206 243 252 0 chr2 169985469 169985572 -80702282 - MIR SINE MIR -114 148 20 627 300 110 39 chr2 169986326 169986736 -80701118 + MLT1J1 LTR MaLR 1 439 -7 265 298 124 16 chr2 169987074 169987195 -80700659 - L2 LINE L2 -5 3267 3134 27 62 0 0 chr2 169987295 169987343 -80700511 + AT_rich Low_complexity Low_complexity 1 48 0 231 326 44 83 chr2 169987517 169987698 -80700156 - L2 LINE L2 -292 2980 2807 345 335 44 52 chr2 169987725 169987976 -80699878 - L2 LINE L2 -587 2727 2479 230 257 67 57 chr2 169987926 169988031 -80699823 - MIR3 SINE MIR -100 108 3 * 543 284 103 70 chr2 169988186 169988470 -80699384 - L2 LINE L2 -840 2474 2176 2418 62 3 0 chr2 169988470 169988760 -80699094 + AluY SINE Alu 21 311 0 543 284 103 70 chr2 169988760 169988816 -80699038 - L2 LINE L2 -1138 2176 2123 294 174 14 29 chr2 169988834 169988883 -80698971 - MLT2B1 LTR ERVL -2 518 469 276 100 0 0 chr2 169988883 169988923 -80698931 + (TG)n Simple_repeat Simple_repeat 2 41 0 294 174 14 29 chr2 169988923 169988942 -80698912 - MLT2B1 LTR ERVL -51 469 451 1314 211 78 19 chr2 169990109 169990431 -80697423 - MER2 DNA MER2_type -1 343 3 509 269 96 18 chr2 169992109 169992338 -80695516 - MIR SINE MIR 0 262 19 2298 106 0 6 chr2 169992645 169992957 -80694897 + AluSg SINE Alu 1 310 0 339 229 0 0 chr2 169995597 169995667 -80692187 + MER116 DNA Mariner 11 80 0 1805 152 0 0 chr2 169998042 169998305 -80689549 + AluSx SINE Alu 32 294 -18 37064 33 3 1 chr2 169998487 170004634 -80683220 + L1PA3 LINE L1 2 6155 0 21 0 0 0 chr2 170005350 170005371 -80682483 + AT_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr2 170005994 170006036 -80681818 + AT_rich Low_complexity Low_complexity 1 42 0 1791 150 8 4 chr2 170006036 170006302 -80681552 + AluJb SINE Alu 1 267 -45 296 268 92 20 chr2 170006441 170006539 -80681315 - MIR SINE MIR -101 107 2 13748 199 40 11 chr2 170007683 170013050 -80674804 + L1PB1 LINE L1 6 5748 -1119 2480 46 0 10 chr2 170013050 170013352 -80674502 + AluY SINE Alu 1 299 -12 13748 199 40 11 chr2 170013352 170014122 -80673732 + L1PB1 LINE L1 5748 6494 -373 1984 111 0 0 chr2 170014124 170014412 -80673442 + L1PB1 LINE L1 6572 6859 -8 286 286 36 6 chr2 170014428 170014596 -80673258 + L1ME4a LINE L1 5938 6110 -11 249 220 0 0 chr2 170014966 170015025 -80672829 - MER103 DNA DNA -75 91 33 327 49 0 0 chr2 170015912 170015953 -80671901 + (TG)n Simple_repeat Simple_repeat 1 41 0 189 412 0 0 chr2 170016672 170016769 -80671085 + L2 LINE L2 2878 2974 -298 252 343 0 0 chr2 170018063 170018136 -80669718 - LTR67 LTR ERVL -369 188 116 204 167 0 0 chr2 170018259 170018295 -80669559 - MIR SINE MIR -164 98 63 521 249 77 50 chr2 170018763 170018944 -80668910 + MIR SINE MIR 47 232 -30 180 0 0 0 chr2 170021787 170021807 -80666047 + (A)n Simple_repeat Simple_repeat 1 20 0 307 273 60 54 chr2 170021963 170022129 -80665725 - MIR SINE MIR -56 206 36 1202 179 212 0 chr2 170024497 170024799 -80663055 + MER47A DNA MER2_type 1 366 0 324 243 195 24 chr2 170025048 170025217 -80662637 + L2 LINE L2 3005 3202 -111 190 286 18 0 chr2 170025300 170025356 -80662498 + L2 LINE L2 3215 3271 -1 3202 157 0 4 chr2 170025547 170026064 -80661790 - MLT2B1 LTR ERVL -5 515 1 402 115 0 0 chr2 170027412 170027473 -80660381 + (TG)n Simple_repeat Simple_repeat 2 62 0 1797 153 0 37 chr2 170027712 170028007 -80659847 + AluJb SINE Alu 1 284 -28 459 250 29 0 chr2 170028146 170028250 -80659604 + MIR SINE MIR 69 175 -87 2174 109 20 3 chr2 170028559 170028862 -80658992 + AluSx SINE Alu 1 308 -4 2383 59 0 3 chr2 170028943 170029230 -80658624 + AluY SINE Alu 1 286 -25 205 282 90 98 chr2 170029374 170029608 -80658246 + L2 LINE L2 2831 3062 -210 235 278 56 0 chr2 170029641 170029713 -80658141 - MER91C DNA MER1_type -48 92 17 2500 48 0 0 chr2 170030369 170030659 -80657195 - AluY SINE Alu -21 290 1 22 0 0 0 chr2 170031921 170031943 -80655911 + AT_rich Low_complexity Low_complexity 1 22 0 228 111 0 0 chr2 170034135 170034171 -80653683 + (T)n Simple_repeat Simple_repeat 1 36 0 284 305 62 16 chr2 170034577 170034705 -80653149 + MIR SINE MIR 48 181 -81 2736 23 0 3 chr2 170035332 170035642 -80652212 - AluY SINE Alu -2 309 1 2452 90 41 3 chr2 170038083 170038448 -80649406 - L1PA11 LINE L1 -1 6173 5795 1765 142 11 3 chr2 170038642 170038959 -80648895 + AluSx SINE Alu 1 319 0 561 252 136 0 chr2 170038959 170039114 -80648740 + MER5A DNA MER1_type 14 189 0 643 243 120 26 chr2 170039122 170039389 -80648465 + MER58D DNA MER1_type 1 292 -94 2397 38 10 0 chr2 170039694 170039983 -80647871 - AluY SINE Alu -19 292 1 374 214 67 0 chr2 170039983 170040072 -80647782 + MER58D DNA MER1_type 292 386 0 21 0 0 0 chr2 170040264 170040285 -80647569 + AT_rich Low_complexity Low_complexity 1 21 0 405 234 256 7 chr2 170041083 170041220 -80646634 - MIR SINE MIR -77 185 15 850 157 71 15 chr2 170041348 170041545 -80646309 - L1ME1 LINE L1 -3 6163 5956 277 326 245 14 chr2 170042337 170042484 -80645370 - MER5A DNA MER1_type 0 189 9 1625 130 70 30 chr2 170042531 170042831 -80645023 - AluJb SINE Alu 0 312 1 2110 132 3 0 chr2 170043449 170043744 -80644110 + AluSx SINE Alu 1 296 -16 195 69 0 0 chr2 170043798 170043827 -80644027 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 310 318 32 39 chr2 170043879 170044033 -80643821 - MIR SINE MIR -108 154 2 204 40 0 0 chr2 170045290 170045315 -80642539 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 181 279 0 98 chr2 170045950 170046011 -80641843 + L2 LINE L2 1128 1182 -2132 207 304 69 10 chr2 170046485 170046587 -80641267 + L2 LINE L2 2357 2464 -850 728 323 90 16 chr2 170046669 170047337 -80640517 + L2 LINE L2 2605 3313 0 259 303 30 10 chr2 170047519 170047618 -80640236 - L3 LINE CR1 -84 1493 1393 206 274 265 29 chr2 170047711 170047915 -80639939 + L2 LINE L2 2726 2977 -337 2425 91 0 17 chr2 170048668 170049020 -80638834 - L1PB1 LINE L1 0 6151 5806 252 143 0 0 chr2 170049029 170049071 -80638783 + (TA)n Simple_repeat Simple_repeat 2 43 0 1245 243 10 18 chr2 170049071 170049458 -80638396 + L1P LINE L1 3267 3650 -2496 188 70 116 0 chr2 170049465 170049551 -80638303 + (TA)n Simple_repeat Simple_repeat 1 96 0 * 201 114 71 29 chr2 170049490 170049560 -80638294 + (TATAA)n Simple_repeat Simple_repeat 1 73 0 316 200 0 0 chr2 170049566 170049626 -80638228 + L1MC4 LINE L1 6644 6703 -1339 247 143 0 0 chr2 170049650 170049699 -80638155 - LTR66 LTR ERVL -171 439 391 5521 167 8 4 chr2 170049706 170051059 -80636795 - L1P5 LINE L1 -383 5768 4406 453 19 0 0 chr2 170051059 170051113 -80636741 + (GTATG)n Simple_repeat Simple_repeat 2 55 0 5521 167 8 4 chr2 170051113 170051428 -80636426 - L1P5 LINE L1 -1745 4406 4094 8422 174 48 2 chr2 170051432 170054851 -80633003 - L1PBa LINE L1 -2430 4432 722 757 69 0 10 chr2 170054951 170055053 -80632801 + AluSp/q SINE Alu 206 306 -7 2402 149 24 4 chr2 170055402 170055852 -80632002 - Tigger4(Zombi) DNA MER2_type 0 2731 2273 473 148 86 0 chr2 170055850 170055931 -80631923 - Tigger4(Zombi) DNA MER2_type -2643 88 1 * 2112 101 3 11 chr2 170055931 170056239 -80631615 - AluSx SINE Alu 0 306 1 230 170 0 64 chr2 170057280 170057327 -80630527 - MIR3 SINE MIR -15 193 150 256 331 250 0 chr2 170057502 170057626 -80630228 - MIR3 SINE MIR -51 157 3 342 311 37 50 chr2 170057933 170058094 -80629760 - L2 LINE L2 -48 3224 3066 434 297 34 38 chr2 170058291 170058554 -80629300 + L1M4 LINE L1 28 289 -6570 306 293 16 16 chr2 170058897 170059020 -80628834 + L1M4 LINE L1 1066 1188 -5667 969 261 169 17 chr2 170059068 170060101 -80627753 + L1M4 LINE L1 1187 2527 -4611 380 125 111 0 chr2 170060114 170060186 -80627668 + MADE1 DNA Mariner 1 80 0 453 238 68 68 chr2 170060470 170060676 -80627178 + L1M4 LINE L1 5637 5842 -1115 457 254 76 65 chr2 170060944 170061019 -80626835 - MLT1K LTR MaLR -27 561 488 1727 181 3 0 chr2 170061019 170061307 -80626547 + AluJb SINE Alu 1 289 -23 457 254 76 65 chr2 170061307 170061506 -80626348 - MLT1K LTR MaLR -100 488 284 472 254 168 5 chr2 170061544 170061729 -80626125 - MLT1K LTR MaLR -372 216 2 183 42 0 0 chr2 170061858 170061882 -80625972 + (GA)n Simple_repeat Simple_repeat 1 24 0 2532 65 0 0 chr2 170062583 170062890 -80624964 + AluY SINE Alu 1 307 -4 486 260 77 30 chr2 170063478 170063647 -80624207 - MIR SINE MIR -79 183 7 259 306 134 37 chr2 170064382 170064516 -80623338 + MIR SINE MIR 52 198 -64 304 259 35 12 chr2 170064551 170064636 -80623218 + L2 LINE L2 3227 3313 0 472 300 17 55 chr2 170064809 170065099 -80622755 - HAL1 LINE L1 -701 1806 1528 358 266 35 0 chr2 170065113 170065226 -80622628 - L1ME4a LINE L1 -31 6090 5974 203 229 16 0 chr2 170066211 170066272 -80621582 + GA-rich Low_complexity Low_complexity 2 63 0 1096 183 11 61 chr2 170066404 170066666 -80621188 - MLT1D LTR MaLR -7 498 250 1866 154 7 13 chr2 170066667 170066966 -80620888 + AluSx SINE Alu 1 297 -15 2714 123 14 0 chr2 170066985 170067399 -80620455 + MER57B LTR ERV1 1 420 -14 297 100 0 0 chr2 170067400 170067450 -80620404 + MER57B LTR ERV1 385 434 0 528 208 28 111 chr2 170067484 170067700 -80620154 - MLT1D LTR MaLR -307 198 1 5655 167 16 30 chr2 170067999 170069071 -80618783 - L1MC1 LINE L1 0 6333 5248 243 0 0 0 chr2 170069071 170069098 -80618756 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1607 164 7 7 chr2 170069100 170069374 -80618480 - AluSx SINE Alu -35 277 4 5655 167 16 30 chr2 170069374 170069647 -80618207 - L1MC1 LINE L1 -1086 5247 5024 234 114 91 0 chr2 170069667 170069711 -80618143 - L1MC1 LINE L1 -1198 4948 4901 2746 133 24 0 chr2 170069759 170070224 -80617630 - L1MB2 LINE L1 -3 6168 5693 738 191 11 39 chr2 170072037 170072215 -80615639 + L1PA16 LINE L1 5989 6161 -5 945 154 74 12 chr2 170072222 170072384 -80615470 + FAM SINE Alu 3 174 -1 2398 96 0 10 chr2 170072396 170072708 -80615146 + AluSx SINE Alu 1 309 -3 200 282 223 0 chr2 170073523 170073626 -80614228 + L2 LINE L2 2934 3059 -213 948 262 0 0 chr2 170073828 170074015 -80613839 + MER5A DNA MER1_type 1 187 -2 269 229 108 117 chr2 170074054 170074294 -80613560 - MER102b DNA MER1_type 0 341 104 2231 102 7 0 chr2 170075572 170075866 -80611988 - AluSq SINE Alu -17 296 1 344 247 62 12 chr2 170075953 170076115 -80611739 - L1ME4a LINE L1 -2 6119 5950 7758 106 11 15 chr2 170076162 170076215 -80611639 + HSMAR2 DNA Mariner 2 54 -1248 2043 138 10 0 chr2 170076215 170076519 -80611335 + AluSx SINE Alu 1 307 -5 7758 106 11 15 chr2 170076519 170077671 -80610183 + HSMAR2 DNA Mariner 54 1202 -100 889 159 51 0 chr2 170077684 170077841 -80610013 + FRAM SINE Alu 1 165 -1 431 344 56 30 chr2 170077841 170078178 -80609676 + L1MC4a LINE L1 2253 2598 -3548 22 35 0 0 chr2 170078235 170078264 -80609590 + AT_rich Low_complexity Low_complexity 1 29 0 289 277 92 73 chr2 170078392 170078690 -80609164 + L1MC4a LINE L1 2895 3186 -2960 2215 106 20 0 chr2 170078690 170078993 -80608861 + AluSq SINE Alu 1 309 -4 289 277 92 73 chr2 170078993 170079756 -80608098 + L1MC4a LINE L1 3186 3976 -2170 606 369 57 12 chr2 170079823 170080332 -80607522 + L1MC4a LINE L1 4067 4598 -1548 2432 62 26 7 chr2 170080562 170080867 -80606987 + AluY SINE Alu 1 311 0 227 324 29 7 chr2 170080922 170081058 -80606796 + L1MC4a LINE L1 4881 5019 -1127 1421 189 57 7 chr2 170081082 170081379 -80606475 + AluJo SINE Alu 1 312 0 360 194 56 56 chr2 170081518 170081626 -80606228 + FLAM_C SINE Alu 2 109 -24 180 0 0 0 chr2 170081635 170081655 -80606199 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 660 219 8 122 chr2 170081676 170081735 -80606119 + MIR SINE MIR 19 83 -179 2546 33 10 0 chr2 170081735 170082038 -80605816 - AluY SINE Alu -5 306 1 660 219 8 122 chr2 170082038 170082225 -80605629 + MIR SINE MIR 83 237 -25 869 296 88 33 chr2 170082270 170082780 -80605074 + L1MC4a LINE L1 5406 5943 -1865 585 274 44 63 chr2 170083072 170083324 -80604530 + LTR16A LTR ERVL 198 444 -6 23 54 0 0 chr2 170083373 170083410 -80604444 + AT_rich Low_complexity Low_complexity 1 37 0 377 348 96 50 chr2 170083974 170085003 -80602851 - L2 LINE L2 -340 2974 1898 2016 127 41 71 chr2 170085108 170085345 -80602509 - MSTC LTR MaLR 0 428 206 707 177 8 23 chr2 170085345 170085475 -80602379 - FLAM_A SINE Alu -4 129 2 2016 127 41 71 chr2 170085475 170085631 -80602223 - MSTC LTR MaLR -222 206 47 523 183 42 70 chr2 170085731 170085873 -80601981 + MIR SINE MIR 109 246 -16 1758 151 46 3 chr2 170086144 170086429 -80601425 + AluJo SINE Alu 1 297 -15 221 316 110 7 chr2 170089196 170089332 -80598522 - L2 LINE L2 -23 3290 3141 581 292 19 80 chr2 170090080 170090344 -80597510 + MIR SINE MIR 15 262 0 206 354 43 34 chr2 170090862 170091071 -80596783 + L2 LINE L2 2556 2766 -548 353 254 71 8 chr2 170091166 170091292 -80596562 - Charlie8 DNA MER1_type -1959 458 325 696 242 13 6 chr2 170091508 170091665 -80596189 + Charlie1 DNA MER1_type 2 159 -2602 398 277 39 15 chr2 170091777 170091907 -80595947 - L2 LINE L2 -3 3269 3137 2659 127 30 5 chr2 170092399 170092800 -80595054 + LTR57 LTR ERVL 1 411 0 668 164 70 35 chr2 170092840 170093011 -80594843 + MLT1B LTR MaLR 1 177 -213 1846 113 35 0 chr2 170093013 170093295 -80594559 + AluSx SINE Alu 1 292 -20 1975 237 80 9 chr2 170093630 170094281 -80593573 - L1PBa LINE L1 -6161 702 6 405 308 36 15 chr2 170094510 170094722 -80593132 - L2 LINE L2 -267 3005 2791 308 305 105 0 chr2 170094917 170095022 -80592832 - L2 LINE L2 -557 2757 2642 1571 190 76 11 chr2 170095096 170095465 -80592389 - L1MB7 LINE L1 -17 6167 5775 * 1636 235 35 26 chr2 170095463 170096144 -80591710 - L1M4 LINE L1 -2775 3869 3183 * 4871 201 31 58 chr2 170096141 170096876 -80590978 - L1M4 LINE L1 -5223 1319 565 2291 97 10 3 chr2 170096876 170097174 -80590680 - AluSq SINE Alu -13 300 1 4871 201 31 58 chr2 170097174 170097745 -80590109 - L1M4 LINE L1 -5977 565 48 2001 145 3 22 chr2 170097745 170098063 -80589791 - AluJo SINE Alu 0 312 1 4871 201 31 58 chr2 170098063 170098096 -80589758 - L1M4 LINE L1 -6494 48 16 228 324 69 10 chr2 170098167 170098269 -80589585 - L2 LINE L2 -5 3267 3160 1125 84 137 4 chr2 170098970 170099232 -80588622 + AluSp SINE Alu 1 297 -6 1670 161 0 4 chr2 170099458 170099719 -80588135 + AluSx SINE Alu 13 272 -40 417 129 32 11 chr2 170099725 170099818 -80588036 + GA-rich Low_complexity Low_complexity 1 95 0 1199 32 5 43 chr2 170099819 170100006 -80587848 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1772 181 38 107 chr2 170100033 170100592 -80587262 + MLT2B1 LTR ERVL 1 520 0 2080 113 0 10 chr2 170100624 170100915 -80586939 + AluSg SINE Alu 1 288 -22 313 321 30 30 chr2 170101595 170101760 -80586094 + MIR3 SINE MIR 3 167 -41 591 198 0 0 chr2 170101877 170101988 -80585866 + FLAM_A SINE Alu 12 122 -20 185 65 32 0 chr2 170102614 170102645 -80585209 + (TATAA)n Simple_repeat Simple_repeat 4 35 0 283 229 145 0 chr2 170104110 170104193 -80583661 + MIR SINE MIR 168 262 0 2379 74 36 3 chr2 170105367 170105704 -80582150 - THE1A LTR MaLR 0 355 8 826 281 122 47 chr2 170105755 170106221 -80581633 - L2 LINE L2 0 3313 2813 303 260 135 0 chr2 170107164 170107260 -80580594 + MER117 DNA MER1_type 42 150 -47 2833 90 59 5 chr2 170107365 170107786 -80580068 - MLT2A1 LTR ERVL 0 444 1 1405 137 0 31 chr2 170107833 170108060 -80579794 + AluJb SINE Alu 85 304 -8 513 259 168 11 chr2 170108827 170109012 -80578842 + MIR SINE MIR 49 262 0 656 177 0 0 chr2 170109188 170109291 -80578563 + MER72 LTR ERV1 5 107 -615 3474 152 6 24 chr2 170109291 170109929 -80577925 + MER41B LTR ERV1 1 627 -8 920 150 180 5 chr2 170110019 170110219 -80577635 + MER72 LTR ERV1 154 388 -334 2280 133 3 0 chr2 170110319 170110672 -80577182 + MER72 LTR ERV1 367 720 -2 407 308 31 15 chr2 170111219 170111349 -80576505 - MIR3 SINE MIR -14 194 63 24 0 0 0 chr2 170111399 170111423 -80576431 + AT_rich Low_complexity Low_complexity 1 24 0 371 167 97 79 chr2 170111659 170111773 -80576081 + MER69A DNA AcHobo 61 176 -1 774 270 58 9 chr2 170111780 170112006 -80575848 + MIR SINE MIR 2 238 -24 599 287 86 24 chr2 170112043 170112252 -80575602 + MIR SINE MIR 4 225 -37 286 236 34 11 chr2 170112299 170112388 -80575466 + MER112 DNA MER1_type 1 91 -169 2356 89 0 0 chr2 170114678 170114970 -80572884 + AluSx SINE Alu 1 292 -20 4097 148 80 59 chr2 170115589 170116044 -80571810 - L1MA9 LINE L1 -25 6287 5843 1621 130 0 55 chr2 170116044 170116297 -80571557 + AluJb SINE Alu 44 282 -30 4097 148 80 59 chr2 170116297 170117538 -80570316 - L1MA9 LINE L1 -469 5843 4566 329 302 28 73 chr2 170118096 170118275 -80569579 + MIR3 SINE MIR 15 185 -23 22 0 0 0 chr2 170119818 170119840 -80568014 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr2 170120381 170120419 -80567435 + AT_rich Low_complexity Low_complexity 1 38 0 2207 83 3 26 chr2 170120776 170121078 -80566776 + AluSc SINE Alu 1 295 -14 270 0 0 0 chr2 170121167 170121197 -80566657 + (CA)n Simple_repeat Simple_repeat 2 31 0 * 297 0 0 0 chr2 170121196 170121229 -80566625 + (TC)n Simple_repeat Simple_repeat 1 33 0 593 228 7 7 chr2 170122621 170122766 -80565088 - Charlie1a DNA MER1_type 0 1455 1311 4498 181 88 58 chr2 170122867 170123604 -80564250 - Charlie1a DNA MER1_type -1420 1341 546 2178 79 7 24 chr2 170123604 170123927 -80563927 - AluY SINE Alu 0 318 1 4498 181 88 58 chr2 170123927 170124486 -80563368 - Charlie1a DNA MER1_type -2215 546 5 2279 186 47 25 chr2 170124502 170125030 -80562824 + MER34 LTR ERV1 2 541 -1 805 218 11 11 chr2 170125354 170125542 -80562312 - MER5A DNA MER1_type 0 189 2 401 261 25 8 chr2 170126237 170126356 -80561498 + MER5B DNA MER1_type 2 122 -56 228 299 145 0 chr2 170126370 170126487 -80561367 - MIR SINE MIR -118 144 11 208 143 39 143 chr2 170126511 170126588 -80561266 + MER5B DNA MER1_type 108 176 -2 21 57 0 0 chr2 170130252 170130287 -80557567 + AT_rich Low_complexity Low_complexity 1 35 0 3355 138 25 0 chr2 170132301 170132859 -80554995 - L1PA16 LINE L1 -9 6157 5586 29 0 0 0 chr2 170133302 170133331 -80554523 + AT_rich Low_complexity Low_complexity 1 29 0 801 239 35 63 chr2 170133447 170133702 -80554152 + MIR SINE MIR 2 249 -13 299 352 51 40 chr2 170133705 170133978 -80553876 + L2 LINE L2 2596 2871 -443 1326 259 77 33 chr2 170134131 170134841 -80553013 + L2 LINE L2 2524 3264 -49 2899 107 36 0 chr2 170135111 170135530 -80552324 + MER57B LTR ERV1 1 434 0 4077 123 28 8 chr2 170135530 170136183 -80551671 + MER57B-int LTR ERV1 1 666 -6871 1285 80 0 0 chr2 170136183 170136358 -80551496 + MER57B-int LTR ERV1 793 967 -6570 * 3272 145 41 18 chr2 170136352 170137122 -80550732 + MER57B-int LTR ERV1 648 3585 -4231 583 157 9 17 chr2 170137125 170137240 -80550614 + MER41-int LTR ERV1 1901 2014 -3932 * 844 123 29 0 chr2 170137239 170137377 -80550477 + MER41-int LTR ERV1 2781 2922 -4615 * 13098 101 44 41 chr2 170137369 170139707 -80548147 + MER41-int LTR ERV1 3252 5595 -1942 1762 80 4 0 chr2 170140033 170140258 -80547596 + AluY SINE Alu 1 226 -85 612 304 113 14 chr2 170140258 170140603 -80547251 + LTR16A LTR ERVL 61 439 -11 3095 143 123 29 chr2 170140781 170141445 -80546409 + LTR8A LTR ERV1 1 727 0 2686 147 51 103 chr2 170142253 170142982 -80544872 - LTR8 LTR ERV1 0 691 1 2094 193 58 108 chr2 170143116 170143950 -80543904 - L1ME1 LINE L1 -6 6160 5369 279 160 0 20 chr2 170147051 170147101 -80540753 - MER94 DNA DNA -85 49 1 395 308 9 0 chr2 170147455 170147562 -80540292 + L2 LINE L2 3206 3313 0 1911 105 98 0 chr2 170147696 170147973 -80539881 + AluSp SINE Alu 1 304 -9 342 0 0 0 chr2 170147976 170148014 -80539840 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 289 324 141 62 chr2 170148622 170149027 -80538827 - L2 LINE L2 0 3272 2836 289 324 141 62 chr2 170149868 170150273 -80537581 - L2 LINE L2 0 3272 2836 23 0 0 0 chr2 170151477 170151500 -80536354 + AT_rich Low_complexity Low_complexity 1 23 0 704 251 45 10 chr2 170153654 170153853 -80534001 - MIR SINE MIR -48 214 9 346 260 115 10 chr2 170156487 170156591 -80531263 - L2 LINE L2 0 3313 3199 367 242 9 117 chr2 170157909 170158140 -80529714 - Charlie8 DNA MER1_type -2211 206 1 587 108 0 0 chr2 170159393 170159476 -80528378 + AluJ/FLAM SINE Alu 1 83 -229 568 268 79 9 chr2 170159499 170159727 -80528127 + MLT1L LTR MaLR 368 611 -4 1952 144 3 3 chr2 170160426 170160739 -80527115 - L1MB5 LINE L1 -11 6163 5851 33 35 0 17 chr2 170161098 170161133 -80526721 + AT_rich Low_complexity Low_complexity 1 36 -21 2405 81 0 3 chr2 170161133 170161441 -80526413 - AluSc SINE Alu -2 307 1 33 35 0 17 chr2 170161441 170161463 -80526391 + AT_rich Low_complexity Low_complexity 36 57 0 217 360 103 0 chr2 170161744 170161880 -80525974 + L3 LINE CR1 1326 1475 -102 843 171 61 0 chr2 170161925 170162089 -80525765 + MER45A DNA AcHobo 5 178 0 553 289 89 22 chr2 170163437 170163662 -80524192 - MIR SINE MIR -3 259 20 212 0 36 0 chr2 170164652 170164680 -80523174 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 239 298 35 61 chr2 170165071 170165185 -80522669 + L2 LINE L2 2779 2889 -425 401 336 62 38 chr2 170165228 170165485 -80522369 + L2 LINE L2 3015 3281 -32 2391 90 0 3 chr2 170165485 170165795 -80522059 - AluY SINE Alu -2 309 1 401 336 62 38 chr2 170165795 170165829 -80522025 + L2 LINE L2 3281 3313 0 308 104 0 0 chr2 170167242 170167290 -80520564 + L1MA4 LINE L1 6242 6289 -11 2269 94 20 0 chr2 170169010 170169309 -80518545 - AluSg SINE Alu -5 305 1 2384 87 0 3 chr2 170170484 170170784 -80517070 + AluY SINE Alu 1 299 -12 342 328 8 25 chr2 170170802 170170921 -80516933 - MER5A DNA MER1_type -1 188 72 2089 153 0 3 chr2 170171129 170171442 -80516412 + AluJb SINE Alu 1 312 0 2208 131 0 0 chr2 170172787 170173092 -80514762 - AluSx SINE Alu -7 305 1 211 247 191 22 chr2 170173329 170173418 -80514436 - L2 LINE L2 0 3313 3210 2807 257 114 75 chr2 170175154 170175672 -80512182 - L2 LINE L2 0 3313 2817 1554 160 24 3 chr2 170175672 170175960 -80511894 - L1MB7 LINE L1 -19 6165 5872 2807 257 114 75 chr2 170175960 170177123 -80510731 - L2 LINE L2 -496 2817 1551 256 214 51 82 chr2 170177346 170177444 -80510410 + MIR SINE MIR 107 201 -61 2206 112 0 3 chr2 170178802 170179098 -80508756 + AluSx SINE Alu 1 295 -17 22 35 0 0 chr2 170179222 170179251 -80508603 + AT_rich Low_complexity Low_complexity 1 29 0 436 356 0 0 chr2 170179570 170179702 -80508152 + MIR3 SINE MIR 67 198 -10 1858 131 46 3 chr2 170179976 170180259 -80507595 - AluSq SINE Alu -18 295 1 417 156 0 0 chr2 170181580 170181657 -80506197 + (TG)n Simple_repeat Simple_repeat 1 77 0 274 224 17 0 chr2 170181696 170181754 -80506100 + MIR SINE MIR 203 261 -1 1591 168 71 20 chr2 170181989 170182286 -80505568 + AluJo SINE Alu 1 312 0 2036 147 0 0 chr2 170183722 170184014 -80503840 - AluSx SINE Alu -20 292 1 234 0 0 0 chr2 170184174 170184200 -80503654 + (A)n Simple_repeat Simple_repeat 1 26 0 2182 85 48 7 chr2 170185164 170185458 -80502396 - AluSp SINE Alu -7 306 1 22 0 0 0 chr2 170185458 170185480 -80502374 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 170185657 170185694 -80502160 + AT_rich Low_complexity Low_complexity 1 37 0 497 224 155 31 chr2 170189237 170189398 -80498456 + MER5A DNA MER1_type 9 189 0 489 287 41 61 chr2 170189461 170189681 -80498173 - MIR SINE MIR -34 228 16 8143 101 66 12 chr2 170189767 170190008 -80497846 + THE1B-int LTR MaLR 250 477 -1103 2369 78 0 3 chr2 170190008 170190304 -80497550 + AluY SINE Alu 1 295 -16 8143 101 66 12 chr2 170190304 170191325 -80496529 + THE1B-int LTR MaLR 477 1580 0 2395 136 5 19 chr2 170191325 170191694 -80496160 + THE1B LTR MaLR 1 364 0 190 344 0 0 chr2 170192615 170192679 -80495175 + MIR SINE MIR 199 262 0 249 319 168 8 chr2 170193058 170193177 -80494677 - L2 LINE L2 -1 3271 3134 599 319 49 29 chr2 170193457 170193764 -80494090 - MER102b DNA MER1_type -8 333 21 323 184 112 31 chr2 170194045 170194143 -80493711 + MLT1F1 LTR MaLR 413 518 -49 553 327 20 0 chr2 170194153 170194407 -80493447 + MLT1F1-int LTR MaLR 292 550 -821 576 265 82 14 chr2 170195347 170195637 -80492217 + MLT1G LTR MaLR 3 276 -314 288 215 37 56 chr2 170195682 170195789 -80492065 + MLT1G LTR MaLR 453 557 -10 23 33 0 0 chr2 170196271 170196301 -80491553 + AT_rich Low_complexity Low_complexity 1 30 0 1058 230 37 55 chr2 170196984 170197388 -80490466 + MLT2C1 LTR ERVL 1 397 0 1930 92 62 0 chr2 170199287 170199559 -80488295 - AluSp SINE Alu -24 289 1 225 0 0 0 chr2 170199952 170199977 -80487877 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 182 301 24 48 chr2 170200231 170200314 -80487540 + L2 LINE L2 3191 3271 -1 306 0 0 0 chr2 170200811 170200845 -80487009 + (CA)n Simple_repeat Simple_repeat 1 34 0 520 233 104 29 chr2 170201347 170201695 -80486159 - L1MC5 LINE L1 -31 7930 7558 2387 95 40 6 chr2 170202902 170203251 -80484603 - THE1B LTR MaLR 0 364 4 205 278 28 42 chr2 170204994 170205066 -80482788 - MER5A DNA MER1_type -5 184 114 * 228 298 0 18 chr2 170205021 170205078 -80482776 + MER5A DNA MER1_type 44 99 -90 1269 53 0 0 chr2 170205281 170205432 -80482422 - AluY SINE Alu -5 306 156 454 277 134 26 chr2 170205928 170206159 -80481695 + MIR SINE MIR 1 256 -6 313 303 30 0 chr2 170206988 170207087 -80480767 + L2 LINE L2 3146 3247 -25 1575 181 3 35 chr2 170207104 170207419 -80480435 + AluJo SINE Alu 1 305 -7 241 208 21 0 chr2 170207802 170207850 -80480004 + L2 LINE L2 3251 3299 -14 814 254 152 49 chr2 170208408 170208935 -80478919 + MLT1G1 LTR MaLR 7 587 -8 366 297 76 8 chr2 170209966 170210084 -80477770 + MIR3 SINE MIR 12 137 -71 822 131 0 8 chr2 170210104 170210226 -80477628 - FLAM_C SINE Alu -12 121 1 969 87 0 0 chr2 170210236 170210374 -80477480 + L1PA7 LINE L1 5145 5282 -864 5347 49 1 0 chr2 170210374 170211029 -80476825 + L1PA7 LINE L1 5496 6152 -2 2132 134 0 6 chr2 170211118 170211432 -80476422 + AluSx SINE Alu 1 312 0 1364 135 38 19 chr2 170211443 170211710 -80476144 - L1MB8 LINE L1 -12 6166 5895 1584 171 49 17 chr2 170211713 170212057 -80475797 - L1MB8 LINE L1 -411 5767 5413 2512 65 3 7 chr2 170212310 170212619 -80475235 + AluY SINE Alu 1 308 -3 417 305 130 51 chr2 170213585 170213955 -80473899 + L1ME4a LINE L1 5723 6121 0 820 235 138 12 chr2 170214395 170214714 -80473140 + L1MC4a LINE L1 5563 5921 -1887 1139 130 0 0 chr2 170215640 170215794 -80472060 - AluSc SINE Alu -26 283 130 682 287 28 9 chr2 170215849 170216065 -80471789 + MIR SINE MIR 43 262 0 1942 146 0 10 chr2 170216199 170216494 -80471360 + AluJo SINE Alu 1 292 -20 247 253 13 13 chr2 170216495 170216570 -80471284 + (TA)n Simple_repeat Simple_repeat 1 75 0 1971 144 29 10 chr2 170217937 170218243 -80469611 + AluJb SINE Alu 1 312 0 531 309 37 0 chr2 170218577 170218765 -80469089 - MIR SINE MIR -32 230 36 581 279 141 35 chr2 170218983 170219885 -80467969 - L1ME2 LINE L1 -226 5938 4836 1737 190 0 22 chr2 170219885 170220201 -80467653 - AluJo SINE Alu -3 309 1 581 279 141 35 chr2 170220201 170220669 -80467185 - L1ME2 LINE L1 -1328 4836 4419 304 267 118 26 chr2 170220702 170220923 -80466931 - L1ME2 LINE L1 -2678 3468 3224 231 303 156 28 chr2 170221038 170221256 -80466598 - HAL1 LINE L1 -840 1667 1422 1704 143 81 39 chr2 170221962 170222320 -80465534 + THE1C LTR MaLR 3 375 0 182 333 14 0 chr2 170222678 170222750 -80465104 - L3 LINE CR1 -159 1418 1346 276 320 0 20 chr2 170223347 170223447 -80464407 + MER5A DNA MER1_type 35 132 -57 198 286 0 0 chr2 170224116 170224172 -80463682 - MIR SINE MIR -49 213 158 21 0 0 0 chr2 170224894 170224915 -80462939 + AT_rich Low_complexity Low_complexity 1 21 0 1817 132 26 0 chr2 170225273 170225538 -80462316 + AluSx SINE Alu 12 283 -29 695 0 0 40 chr2 170225547 170225646 -80462208 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 1534 167 97 6 chr2 170226258 170226569 -80461285 + MER44D DNA MER2_type 1 609 0 2217 113 0 25 chr2 170226730 170227048 -80460806 - AluSx SINE Alu -1 311 2 1887 200 68 18 chr2 170227111 170227607 -80460247 - Charlie1b DNA MER1_type -1 522 2 271 192 27 0 chr2 170227608 170227681 -80460173 + (TA)n Simple_repeat Simple_repeat 2 76 0 201 279 132 62 chr2 170227724 170227853 -80460001 - MIR SINE MIR -60 202 65 998 255 62 21 chr2 170229039 170229412 -80458442 - L1MC4a LINE L1 -1884 5924 5537 592 284 33 0 chr2 170229477 170229688 -80458166 - Charlie8 DNA MER1_type -2153 264 47 1656 183 13 16 chr2 170229954 170230260 -80457594 - AluJo SINE Alu -7 305 1 207 167 74 19 chr2 170231342 170231396 -80456458 + MIR SINE MIR 100 156 -106 1469 198 119 0 chr2 170231403 170231757 -80456097 + MSTD LTR MaLR 1 396 0 462 316 40 23 chr2 170231759 170231936 -80455918 - MIR SINE MIR -21 241 62 229 322 91 37 chr2 170232101 170232540 -80455314 + L2 LINE L2 2066 2601 -713 278 296 61 0 chr2 170232976 170233074 -80454780 + MIR SINE MIR 70 173 -89 650 254 8 0 chr2 170233392 170233526 -80454328 - MIR3 SINE MIR -1 207 73 244 214 54 0 chr2 170233532 170233588 -80454266 - L2 LINE L2 -3 3310 3252 741 176 0 0 chr2 170233881 170234000 -80453854 + AluJb SINE Alu 2 120 -192 336 301 21 0 chr2 170234606 170234699 -80453155 + (CATA)n Simple_repeat Simple_repeat 4 98 0 262 245 20 20 chr2 170235230 170235328 -80452526 - L1MC4 LINE L1 -16 8026 7929 2255 70 3 3 chr2 170237003 170237288 -80450566 + AluY SINE Alu 1 285 -26 1878 158 45 26 chr2 170238519 170238900 -80448954 + MLT1B LTR MaLR 3 390 0 446 310 19 13 chr2 170240801 170240956 -80446898 + MIR SINE MIR 28 183 -79 202 342 26 26 chr2 170243913 170244030 -80443824 + L3 LINE CR1 268 384 -1193 819 276 103 29 chr2 170244380 170244924 -80442930 + L1ME4a LINE L1 5530 6113 -8 2478 221 98 26 chr2 170245361 170246354 -80441500 + L1ME1 LINE L1 4899 6134 -200 2859 10 0 0 chr2 170246354 170246666 -80441188 + AluYb8 SINE Alu 1 312 -6 2478 221 98 26 chr2 170246666 170246881 -80440973 + L1ME1 LINE L1 6134 6332 -2 366 256 11 0 chr2 170248052 170248142 -80439712 - L2 LINE L2 -45 3268 3178 54 16 0 0 chr2 170248297 170248358 -80439496 + AT_rich Low_complexity Low_complexity 1 61 0 194 226 38 135 chr2 170248504 170248637 -80439217 - MER5A DNA MER1_type -42 147 28 2309 112 0 0 chr2 170249616 170249919 -80437935 - AluSg1 SINE Alu -6 303 1 182 62 31 0 chr2 170252086 170252118 -80435736 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2204 84 3 14 chr2 170253127 170253443 -80434411 + AluSc SINE Alu 1 313 0 2407 81 0 0 chr2 170255256 170255551 -80432303 - AluY SINE Alu -16 295 1 472 303 41 32 chr2 170256533 170256751 -80431103 + MIR SINE MIR 33 252 -10 2217 183 47 27 chr2 170257384 170257870 -80429984 + MLT1D LTR MaLR 10 505 0 861 146 0 15 chr2 170258662 170258792 -80429062 - FLAM_C SINE Alu -5 128 1 527 286 33 60 chr2 170260194 170260561 -80427293 + L1ME4a LINE L1 5715 6071 -50 223 314 86 9 chr2 170260870 170260975 -80426879 + MIR SINE MIR 25 137 -71 467 380 9 9 chr2 170261287 170261513 -80426341 + MIR SINE MIR 20 245 -17 318 289 125 29 chr2 170261908 170262116 -80425738 + L2 LINE L2 3075 3302 -11 183 230 216 14 chr2 170263189 170263263 -80424591 - L3 LINE CR1 -1384 193 105 190 191 16 32 chr2 170263696 170263759 -80424095 + (TATATG)n Simple_repeat Simple_repeat 5 66 0 2248 121 0 0 chr2 170264225 170264531 -80423323 - AluSx SINE Alu -6 306 1 255 189 0 0 chr2 170264573 170264626 -80423228 + (CA)n Simple_repeat Simple_repeat 1 53 0 3040 266 176 31 chr2 170264646 170266220 -80421634 + L2 LINE L2 1233 3104 -209 2524 218 112 7 chr2 170266220 170266812 -80421042 + MLT1E1 LTR MaLR 1 654 0 3040 266 176 31 chr2 170266812 170267058 -80420796 + L2 LINE L2 3104 3313 0 1317 179 129 41 chr2 170267286 170267626 -80420228 + MLT1A2 LTR MaLR 1 370 -4 891 320 117 48 chr2 170267636 170268382 -80419472 + L3 LINE CR1 314 1110 -467 298 267 114 0 chr2 170268402 170268507 -80419347 + MER103 DNA DNA 1 117 -49 209 362 43 0 chr2 170268884 170268953 -80418901 + MER5A DNA MER1_type 109 180 -9 337 332 85 53 chr2 170268958 170269205 -80418649 + L3 LINE CR1 1305 1559 -18 259 293 0 105 chr2 170269201 170269334 -80418520 + L2 LINE L2 3154 3272 0 * 22 0 0 0 chr2 170269949 170269971 -80417883 + AT_rich Low_complexity Low_complexity 1 22 0 195 129 0 0 chr2 170270235 170270266 -80417588 + (A)n Simple_repeat Simple_repeat 1 31 0 319 300 9 73 chr2 170271442 170271552 -80416302 + MIR SINE MIR 45 147 -61 364 326 91 17 chr2 170272532 170272707 -80415147 + MER5A DNA MER1_type 1 188 -1 2389 158 40 42 chr2 170273923 170273976 -80413878 + MSTB LTR MaLR 3 55 -371 1943 166 0 7 chr2 170273976 170274277 -80413577 + AluSx SINE Alu 1 299 -13 2389 158 40 42 chr2 170274277 170274648 -80413206 + MSTB LTR MaLR 55 426 0 2547 141 6 3 chr2 170274886 170275249 -80412605 - THE1B LTR MaLR 0 364 1 1079 274 7 0 chr2 170275426 170275696 -80412158 + L1MD3 LINE L1 7719 7990 -5 2311 92 7 3 chr2 170275961 170276254 -80411600 - AluSx SINE Alu -18 294 1 377 291 52 30 chr2 170276725 170276859 -80410995 + MER5B DNA MER1_type 6 142 -36 180 308 0 15 chr2 170277272 170277337 -80410517 + L2 LINE L2 3205 3268 -4 2960 41 3 0 chr2 170277478 170277818 -80410036 - L1PA5 LINE L1 0 6154 5814 2174 80 42 3 chr2 170278631 170278919 -80408935 + AluY SINE Alu 1 299 -12 294 250 143 9 chr2 170279022 170279134 -80408720 + L1MC/D LINE L1 5709 5835 -1973 656 277 44 65 chr2 170279382 170279703 -80408151 + L2 LINE L2 2992 3305 -8 1913 119 40 0 chr2 170280671 170280949 -80406905 - AluSx SINE Alu -23 289 1 368 262 69 45 chr2 170281750 170281916 -80405938 - MIR SINE MIR -62 146 15 507 237 90 0 chr2 170283173 170283329 -80404525 - MIR3 SINE MIR -8 200 31 460 314 69 23 chr2 170283452 170283755 -80404099 + L1ME4a LINE L1 5611 5927 -194 200 368 23 41 chr2 170283826 170283997 -80403857 - L2 LINE L2 -410 2904 2737 22 0 0 0 chr2 170284514 170284536 -80403318 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr2 170286628 170286649 -80401205 + (A)n Simple_repeat Simple_repeat 1 21 0 236 155 17 35 chr2 170287021 170287079 -80400775 + MIR SINE MIR 98 154 -108 195 369 63 27 chr2 170287980 170288091 -80399763 + MIR3 SINE MIR 87 201 -7 218 238 181 29 chr2 170288722 170288827 -80399027 - MIR SINE MIR -23 239 119 306 272 179 11 chr2 170289180 170289314 -80398540 + MIR3 SINE MIR 4 143 -65 312 321 131 0 chr2 170289802 170289939 -80397915 - MIR SINE MIR -17 245 91 2765 124 7 5 chr2 170290048 170290458 -80397396 - L1PA15 LINE L1 0 6165 5755 1661 202 11 0 chr2 170290472 170290759 -80397095 - AluJo SINE Alu -22 290 1 2429 189 168 21 chr2 170290976 170291600 -80396254 + L1MC4 LINE L1 7327 8042 0 2155 101 6 25 chr2 170291609 170291925 -80395929 + AluSq SINE Alu 1 310 -3 2230 107 7 0 chr2 170292421 170292721 -80395133 - AluSx SINE Alu -10 302 1 2496 51 7 0 chr2 170292865 170293157 -80394697 + L1PA7 LINE L1 5860 6153 -1 2144 115 0 0 chr2 170295159 170295471 -80392383 - AluSc SINE Alu 0 309 1 30 27 0 0 chr2 170296875 170296912 -80390942 + AT_rich Low_complexity Low_complexity 1 37 0 222 222 0 0 chr2 170296976 170297030 -80390824 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 565 300 80 16 chr2 170298350 170298803 -80389051 - L1MC5 LINE L1 -398 7410 7018 707 250 204 44 chr2 170298811 170299311 -80388543 + L1MC4 LINE L1 7462 8041 -1 425 338 15 8 chr2 170299899 170300032 -80387822 - L2 LINE L2 -1 3271 3138 228 278 35 76 chr2 170300728 170300872 -80386982 + L2 LINE L2 3127 3264 -49 2222 91 31 0 chr2 170301603 170301890 -80385964 + AluSx SINE Alu 1 296 -16 295 287 23 70 chr2 170303332 170303461 -80384393 - MIR SINE MIR -36 226 104 2331 97 3 10 chr2 170304104 170304415 -80383439 + AluSc SINE Alu 1 309 0 309 267 73 12 chr2 170307421 170307586 -80380268 + L1ME4a LINE L1 5944 6118 -3 990 194 5 22 chr2 170309267 170309489 -80378365 - MER46A DNA MER2_type -17 219 2 22 0 0 0 chr2 170309961 170309983 -80377871 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr2 170310391 170310433 -80377421 + AT_rich Low_complexity Low_complexity 1 42 0 342 259 134 43 chr2 170311266 170311449 -80376405 + L2 LINE L2 2538 2748 -566 2040 118 0 10 chr2 170311449 170311745 -80376109 + AluSc SINE Alu 1 293 -16 342 259 134 43 chr2 170311745 170311793 -80376061 + L2 LINE L2 2748 2790 -524 1873 178 0 7 chr2 170312317 170312626 -80375228 - AluJo SINE Alu -5 307 1 992 169 12 0 chr2 170312858 170313018 -80374836 + FRAM SINE Alu 4 165 -1 390 307 36 18 chr2 170313445 170313611 -80374243 - Charlie8 DNA MER1_type -2177 240 72 194 286 16 16 chr2 170315972 170316035 -80371819 + L2 LINE L2 2683 2745 -569 311 306 44 33 chr2 170317412 170317592 -80370262 + MLT1L LTR MaLR 428 609 -6 442 264 209 0 chr2 170317992 170318140 -80369714 + MER5A DNA MER1_type 10 188 -1 476 82 41 0 chr2 170318666 170318739 -80369115 - MADE1 DNA Mariner -2 78 3 2266 96 0 10 chr2 170319472 170319774 -80368080 + AluY SINE Alu 1 299 -12 249 304 0 0 chr2 170320440 170320509 -80367345 - MIR3 SINE MIR -26 182 114 184 319 99 22 chr2 170320638 170320729 -80367125 + MIR SINE MIR 86 183 -79 1554 272 158 44 chr2 170321230 170321407 -80366447 - L2 LINE L2 0 3313 3157 907 169 49 27 chr2 170321407 170321591 -80366263 - MER5A DNA MER1_type -1 188 1 1554 272 158 44 chr2 170321591 170322289 -80365565 - L2 LINE L2 -156 3157 2355 206 238 113 38 chr2 170322308 170322388 -80365466 - MIR3 SINE MIR -19 189 104 360 327 83 6 chr2 170322672 170322828 -80365026 + L2 LINE L2 3140 3307 -6 261 330 160 0 chr2 170323972 170324066 -80363788 - L2 LINE L2 -26 3246 3138 467 248 58 29 chr2 170324677 170324814 -80363040 - MIR SINE MIR -114 148 8 2060 174 8 0 chr2 170325437 170325799 -80362055 - MLT1A1 LTR MaLR 0 365 1 677 295 40 9 chr2 170326637 170326861 -80360993 + MIR SINE MIR 26 256 -6 216 228 0 0 chr2 170328452 170328509 -80359345 + (TAG)n Simple_repeat Simple_repeat 1 57 0 553 317 104 0 chr2 170328532 170328753 -80359101 - MIR SINE MIR -11 251 8 360 223 48 29 chr2 170328953 170329056 -80358798 + L1MC5 LINE L1 7783 7887 -74 2312 98 10 0 chr2 170330020 170330326 -80357528 + AluSq SINE Alu 1 309 -4 23 54 0 0 chr2 170330616 170330653 -80357201 + AT_rich Low_complexity Low_complexity 1 37 0 2270 118 3 0 chr2 170330759 170331063 -80356791 + AluSx SINE Alu 1 305 -7 2089 153 0 3 chr2 170332408 170332721 -80355133 - AluJb SINE Alu 0 312 1 209 200 0 0 chr2 170333579 170333614 -80354240 + T-rich Low_complexity Low_complexity 2 36 0 224 357 0 0 chr2 170334000 170334070 -80353784 + MIR SINE MIR 81 150 -58 532 329 19 14 chr2 170334122 170334329 -80353525 + MIR SINE MIR 55 262 0 182 193 18 70 chr2 170334558 170334615 -80353239 - MIR SINE MIR -6 256 203 668 188 124 5 chr2 170334646 170334832 -80353022 - MER3 DNA MER1_type -1 208 1 214 297 66 11 chr2 170335843 170335934 -80351920 + MIR SINE MIR 125 220 -42 350 240 10 10 chr2 170336014 170336118 -80351736 - MER103 DNA DNA -9 157 54 1811 163 27 7 chr2 170336722 170337022 -80350832 + AluSx SINE Alu 1 306 -6 270 0 0 0 chr2 170337645 170337675 -80350179 + (TG)n Simple_repeat Simple_repeat 2 31 0 546 253 152 6 chr2 170338487 170338645 -80349209 - MER5A DNA MER1_type 0 189 9 1584 204 10 10 chr2 170339507 170339801 -80348053 - AluJo SINE Alu -18 294 1 598 295 47 11 chr2 170339997 170340187 -80347667 + MIR SINE MIR 48 244 -18 809 220 6 6 chr2 170340900 170341077 -80346777 - MER5B DNA MER1_type 0 178 2 2119 106 29 22 chr2 170341551 170341862 -80345992 - AluSq SINE Alu 0 313 1 747 189 8 0 chr2 170342730 170342862 -80344992 + FLAM_A SINE Alu 1 133 0 2322 109 0 0 chr2 170348078 170348382 -80339472 + AluSx SINE Alu 1 304 -8 187 277 191 43 chr2 170348483 170348624 -80339230 - MIR3 SINE MIR -4 204 43 4243 177 22 60 chr2 170349120 170349730 -80338124 + L1 LINE L1 3544 4176 -1970 1172 100 100 0 chr2 170349730 170349890 -80337964 + AluSg/x SINE Alu 123 298 -14 4243 177 22 60 chr2 170349890 170350644 -80337210 + L1 LINE L1 4176 4932 -1214 421 282 60 40 chr2 170352880 170353029 -80334825 - MIR SINE MIR -91 171 20 372 263 72 46 chr2 170353993 170354145 -80333709 - MIR3 SINE MIR -17 191 36 377 239 261 14 chr2 170354164 170354306 -80333548 - MER112 DNA MER1_type 0 260 84 209 346 12 0 chr2 170355326 170355407 -80332447 - L2 LINE L2 0 3272 3191 1943 185 8 58 chr2 170355482 170355876 -80331978 + MLT1A2 LTR MaLR 1 374 0 232 240 20 0 chr2 170356234 170356284 -80331570 + MIR3 SINE MIR 110 160 -48 2329 105 0 0 chr2 170356577 170356871 -80330983 + AluSg SINE Alu 1 294 -16 1002 245 14 0 chr2 170356896 170357112 -80330742 + MIR SINE MIR 39 257 -5 347 293 36 7 chr2 170357164 170357304 -80330550 - L1ME LINE L1 -349 5821 5678 488 322 38 4 chr2 170357743 170357982 -80329872 - Charlie8 DNA MER1_type -2131 286 40 267 134 194 15 chr2 170358076 170358143 -80329711 - MER116 DNA Mariner 0 80 2 23 33 0 0 chr2 170358596 170358626 -80329228 + AT_rich Low_complexity Low_complexity 1 30 0 199 369 15 0 chr2 170359333 170359398 -80328456 + MIR SINE MIR 51 116 -92 184 288 17 0 chr2 170359651 170359710 -80328144 + L2 LINE L2 3253 3312 -1 22 0 0 0 chr2 170360893 170360915 -80326939 + AT_rich Low_complexity Low_complexity 1 22 0 358 335 13 20 chr2 170361021 170361173 -80326681 + MER5A DNA MER1_type 36 186 -3 706 244 298 34 chr2 170361241 170361836 -80326018 - LTR50 LTR ERVL -3 659 9 497 283 27 43 chr2 170362096 170362280 -80325574 + MIR SINE MIR 79 259 -3 396 198 55 0 chr2 170363273 170363364 -80324490 - MER5A DNA MER1_type -85 104 9 1915 145 0 20 chr2 170363636 170363932 -80323922 + AluSx SINE Alu 1 290 -22 1223 173 0 14 chr2 170364705 170364913 -80322941 + AluJo SINE Alu 87 291 -21 2072 119 0 0 chr2 170365248 170365525 -80322329 + AluSq SINE Alu 11 287 -26 677 133 8 25 chr2 170365714 170365834 -80322020 + L1M1 LINE L1 4886 5003 -1143 2089 173 38 29 chr2 170365838 170366388 -80321466 - MLT2A2 LTR ERVL 0 554 1 2957 133 20 2 chr2 170366388 170367072 -80320782 + L1M1 LINE L1 5003 5699 -605 565 163 0 41 chr2 170367072 170367170 -80320684 - AluJo SINE Alu -123 189 96 1118 86 7 0 chr2 170367170 170367310 -80320544 - AluSq/x SINE Alu -169 143 3 24 0 0 0 chr2 170367810 170367834 -80320020 + AT_rich Low_complexity Low_complexity 1 24 0 2377 92 0 3 chr2 170369123 170369427 -80318427 - AluSg SINE Alu -7 303 1 554 256 87 6 chr2 170369939 170370037 -80317817 + MIR SINE MIR 77 166 -96 1917 149 66 30 chr2 170370037 170370399 -80317455 - THE1C LTR MaLR 0 375 1 554 256 87 6 chr2 170370399 170370472 -80317382 + MIR SINE MIR 166 262 0 1999 113 55 7 chr2 170370741 170371034 -80316820 + AluSx SINE Alu 1 307 -5 1109 270 58 121 chr2 170371252 170371920 -80315934 + L1MEc LINE L1 3 712 -5684 2226 96 0 13 chr2 170371920 170372232 -80315622 + AluSx SINE Alu 1 308 -4 1109 270 58 121 chr2 170372232 170372243 -80315611 + L1MEc LINE L1 712 722 -5674 603 179 0 0 chr2 170372243 170372338 -80315516 + FLAM_A SINE Alu 38 132 -10 1109 270 58 121 chr2 170372338 170372799 -80315055 + L1MEc LINE L1 722 1160 -5236 2695 192 111 17 chr2 170372819 170373531 -80314323 + L1MC4 LINE L1 7067 7845 -197 22 35 0 0 chr2 170373531 170373560 -80314294 + AT_rich Low_complexity Low_complexity 1 29 0 1883 210 151 68 chr2 170373568 170374253 -80313601 + L1M4 LINE L1 3833 4641 -1505 2247 134 0 0 chr2 170374253 170374558 -80313296 + AluSx SINE Alu 1 305 -7 1883 210 151 68 chr2 170374558 170374805 -80313049 + L1M4 LINE L1 4641 4866 -1280 378 223 0 39 chr2 170374819 170374922 -80312932 - L1ME2 LINE L1 -154 6010 5912 886 313 114 11 chr2 170374943 170375311 -80312543 - MLT1K LTR MaLR -87 501 96 21 0 0 0 chr2 170376069 170376090 -80311764 + AT_rich Low_complexity Low_complexity 1 21 0 1712 260 117 0 chr2 170376391 170376861 -80310993 + MLT1H1 LTR MaLR 12 536 -19 5204 61 3 5 chr2 170377925 170378545 -80309309 + L1PA7 LINE L1 5536 6154 0 2494 74 0 3 chr2 170379289 170379601 -80308253 + AluY SINE Alu 1 311 0 2271 109 0 0 chr2 170380618 170380912 -80306942 - AluSx SINE Alu -11 301 8 265 191 159 0 chr2 170380991 170381054 -80306800 - MLT1K LTR MaLR -24 564 492 2080 103 4 18 chr2 170381730 170382011 -80305843 + AluSx SINE Alu 1 277 -35 2073 136 0 22 chr2 170382139 170382455 -80305399 + AluSx SINE Alu 1 309 -3 419 185 46 46 chr2 170382496 170382626 -80305228 + MER31-int LTR ERV1 2784 2913 -2023 662 191 55 0 chr2 170382670 170382780 -80305074 - FLAM_A SINE Alu -17 116 1 1112 243 125 85 chr2 170383253 170383957 -80303897 + MER31-int LTR ERV1 3330 4061 -875 2221 102 20 0 chr2 170384234 170384538 -80303316 + AluSg SINE Alu 1 310 0 2186 104 7 3 chr2 170384611 170384910 -80302944 - AluSx SINE Alu -12 300 1 758 306 115 28 chr2 170386107 170386256 -80301598 - L2 LINE L2 -1 3312 3177 1939 95 73 4 chr2 170386256 170386529 -80301325 + AluSx SINE Alu 1 292 -20 758 306 115 28 chr2 170386529 170387148 -80300706 - L2 LINE L2 -136 3177 2472 2360 99 0 6 chr2 170387629 170387941 -80299913 + AluSq SINE Alu 1 310 -3 2191 89 46 0 chr2 170389407 170389688 -80298166 - AluSg SINE Alu -16 294 1 1902 144 0 40 chr2 170390258 170390556 -80297298 + AluSx SINE Alu 1 286 -26 315 0 0 0 chr2 170390560 170390595 -80297259 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 381 311 34 17 chr2 170391967 170392144 -80295710 + MER5A DNA MER1_type 7 186 -3 308 256 256 0 chr2 170392270 170392387 -80295467 - MIR SINE MIR -69 193 47 803 181 93 84 chr2 170392879 170393094 -80294760 - MER20 DNA MER1_type 0 219 3 186 191 0 0 chr2 170393303 170393345 -80294509 + A-rich Low_complexity Low_complexity 1 42 0 2245 96 0 3 chr2 170393478 170393769 -80294085 - AluSx SINE Alu -22 290 1 181 359 16 0 chr2 170394037 170394101 -80293753 - L2 LINE L2 -10 3262 3198 242 222 103 17 chr2 170394943 170395060 -80292794 + L1MC4 LINE L1 7916 8042 0 518 172 52 9 chr2 170395181 170395297 -80292557 + L1ME4a LINE L1 5979 6099 -22 30 45 0 0 chr2 170395307 170395351 -80292503 + AT_rich Low_complexity Low_complexity 1 44 0 1675 148 19 53 chr2 170395403 170395721 -80292133 + AluJo SINE Alu 6 312 0 2298 99 3 3 chr2 170396163 170396476 -80291378 - AluSp SINE Alu 0 313 1 181 219 0 0 chr2 170396497 170396529 -80291325 + MIR SINE MIR 81 112 -150 295 320 90 8 chr2 170397655 170397777 -80290077 - MIR SINE MIR -113 149 18 359 253 111 82 chr2 170398567 170398883 -80288971 + MLT1I LTR MaLR 83 407 -2 2101 113 3 16 chr2 170399270 170399580 -80288274 + AluSp SINE Alu 1 306 -7 2100 144 10 0 chr2 170399592 170399898 -80287956 + AluSx SINE Alu 1 309 -3 495 48 0 0 chr2 170399901 170399963 -80287891 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 2007 152 0 0 chr2 170400391 170400694 -80287160 - AluSx SINE Alu -9 303 1 186 256 0 0 chr2 170402323 170402366 -80285488 + MIR SINE MIR 77 119 -143 213 296 174 10 chr2 170403152 170403250 -80284604 + MIR SINE MIR 149 262 0 1271 147 5 27 chr2 170403358 170403582 -80284272 + AluJo SINE Alu 83 301 -11 274 328 35 0 chr2 170403729 170403845 -80284009 + L1ME4a LINE L1 5695 5814 -307 415 306 96 6 chr2 170403934 170404091 -80283763 + MIR SINE MIR 11 181 -81 1090 146 48 125 chr2 170404220 170404515 -80283339 + L1MB5 LINE L1 5893 6164 -10 269 277 18 27 chr2 170404774 170404886 -80282968 - L1MC4a LINE L1 -1892 5916 5806 1924 151 88 3 chr2 170407415 170407732 -80280122 + MER2 DNA MER2_type 1 344 0 1231 99 0 6 chr2 170409012 170409173 -80278681 + AluSg/x SINE Alu 135 294 -16 670 170 9 9 chr2 170409974 170410080 -80277774 - FLAM_C SINE Alu -25 118 13 200 116 0 139 chr2 170410235 170410278 -80277576 + MIR SINE MIR 2 38 -224 344 255 51 0 chr2 170412716 170412814 -80275040 + MIR SINE MIR 134 236 -26 304 273 64 76 chr2 170412858 170413030 -80274824 - MIR SINE MIR -56 206 37 2370 99 3 6 chr2 170413100 170413412 -80274442 + AluSx SINE Alu 1 311 -1 330 316 70 23 chr2 170413532 170413703 -80274151 + MIR SINE MIR 77 255 -7 192 77 0 0 chr2 170416488 170416514 -80271340 + (CACCC)n Simple_repeat Simple_repeat 5 30 0 260 314 57 9 chr2 170416638 170416743 -80271111 + L1ME4a LINE L1 5549 5658 -2150 291 275 33 71 chr2 170416980 170417162 -80270692 + L1ME4a LINE L1 5874 6048 -73 2213 79 62 0 chr2 170417537 170417828 -80270026 - AluY SINE Alu -2 309 1 239 261 135 18 chr2 170418245 170418356 -80269498 + L1ME4a LINE L1 5985 6108 -13 2064 121 17 0 chr2 170418380 170418669 -80269185 + AluSq SINE Alu 1 294 -19 2018 115 3 58 chr2 170418959 170419271 -80268583 + AluSg SINE Alu 1 295 -15 200 226 0 19 chr2 170419314 170419367 -80268487 + A-rich Low_complexity Low_complexity 3 54 0 1392 268 72 25 chr2 170420004 170420516 -80267338 + MLT1H LTR MaLR 14 549 0 343 303 121 0 chr2 170421030 170421162 -80266692 + MARNA DNA Mariner 86 233 -353 2333 88 0 3 chr2 170422502 170422797 -80265057 + AluSg SINE Alu 1 294 -16 945 228 19 19 chr2 170424091 170424297 -80263557 + MER3 DNA MER1_type 1 206 -3 934 165 0 0 chr2 170424742 170424875 -80262979 + FLAM_C SINE Alu 1 133 0 2158 113 0 20 chr2 170424911 170425213 -80262641 - AluSg SINE Alu -14 296 1 12900 25 8 0 chr2 170425320 170427551 -80260303 - L1PA4 LINE L1 0 6155 3937 513 210 10 0 chr2 170429830 170429930 -80257924 + L1ME3A LINE L1 6059 6159 -11 500 349 126 34 chr2 170429997 170430624 -80257230 - L2 LINE L2 -340 2974 2290 196 307 155 60 chr2 170430705 170431119 -80256735 - L2 LINE L2 -1245 2069 1617 622 249 106 18 chr2 170431652 170431869 -80255985 - MIR SINE MIR -4 258 23 548 89 11 22 chr2 170432067 170432157 -80255697 + L1MB4 LINE L1 6091 6179 -1 1724 139 61 4 chr2 170432169 170432449 -80255405 + AluSx SINE Alu 1 296 -16 333 0 0 0 chr2 170432449 170432486 -80255368 + (TA)n Simple_repeat Simple_repeat 1 37 0 1781 156 3 31 chr2 170432490 170432811 -80255043 + AluJo SINE Alu 1 312 0 292 304 165 45 chr2 170435091 170435334 -80252520 + L2 LINE L2 2999 3270 -2 25 31 0 0 chr2 170435835 170435867 -80251987 + AT_rich Low_complexity Low_complexity 1 32 0 216 0 0 0 chr2 170436926 170436950 -80250904 + (A)n Simple_repeat Simple_repeat 1 24 0 252 0 0 0 chr2 170437080 170437108 -80250746 + (A)n Simple_repeat Simple_repeat 1 28 0 42 71 0 0 chr2 170437301 170437385 -80250469 + GC_rich Low_complexity Low_complexity 1 84 0 189 74 0 0 chr2 170437555 170437582 -80250272 + (CCG)n Simple_repeat Simple_repeat 1 27 0 696 181 170 29 chr2 170439792 170439861 -80247993 - MER20 DNA MER1_type 0 219 161 1723 201 77 0 chr2 170439861 170440200 -80247654 + MLT1A1 LTR MaLR 1 365 0 696 181 170 29 chr2 170440200 170440301 -80247553 - MER20 DNA MER1_type -58 161 25 1476 82 0 53 chr2 170440496 170440670 -80247184 - AluSq SINE Alu -14 299 136 2459 74 0 6 chr2 170440670 170440982 -80246872 - AluY SINE Alu -1 310 1 1476 82 0 53 chr2 170440982 170441014 -80246840 - AluSq SINE Alu -177 136 104 1999 120 7 14 chr2 170441022 170441313 -80246541 - AluSx SINE Alu -23 289 1 1676 164 24 14 chr2 170441319 170441606 -80246248 - AluJo SINE Alu -22 290 1 312 231 261 8 chr2 170441624 170441754 -80246100 + MIR SINE MIR 86 248 -14 579 186 25 25 chr2 170441854 170441972 -80245882 + L2 LINE L2 3193 3310 -3 195 327 27 64 chr2 170442042 170442152 -80245702 - L2 LINE L2 -649 2665 2560 283 288 200 18 chr2 170442554 170442724 -80245130 + MIR SINE MIR 12 212 -50 1826 160 70 72 chr2 170442820 170443258 -80244596 + MLT1C LTR MaLR 8 446 -21 1846 126 171 58 chr2 170443258 170443369 -80244485 - MER65A LTR ERV1 0 445 348 243 0 0 0 chr2 170443369 170443396 -80244458 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1846 126 171 58 chr2 170443396 170443682 -80244172 - MER65A LTR ERV1 -97 348 3 1826 160 70 72 chr2 170443682 170443699 -80244155 + MLT1C LTR MaLR 446 462 -5 2066 106 58 7 chr2 170443790 170444082 -80243772 + AluSx SINE Alu 1 307 -5 211 299 111 26 chr2 170445224 170445341 -80242513 - L2 LINE L2 0 3313 3187 816 119 0 2 chr2 170445413 170445674 -80242180 + AluSx SINE Alu 1 310 0 397 239 100 23 chr2 170446115 170446245 -80241609 - Charlie8 DNA MER1_type -2227 190 51 235 280 47 19 chr2 170446458 170446565 -80241289 + L1MC4 LINE L1 7933 8042 0 335 344 134 6 chr2 170446731 170446888 -80240966 + MER5B DNA MER1_type 1 177 -1 3600 63 20 14 chr2 170447064 170447455 -80240399 + MLT2A1 LTR ERVL 1 397 -47 405 0 0 0 chr2 170447455 170447500 -80240354 + (CA)n Simple_repeat Simple_repeat 2 46 0 3600 63 20 14 chr2 170447500 170447549 -80240305 + MLT2A1 LTR ERVL 397 444 0 17908 115 10 6 chr2 170447549 170448211 -80239643 + HERVL-A1 LTR ERVL 1 659 -4995 1976 133 4 0 chr2 170448211 170448540 -80239314 - AluSx SINE Alu 0 333 4 17908 115 10 6 chr2 170448540 170453450 -80234404 + HERVL-A1 LTR ERVL 659 5654 0 3338 57 2 63 chr2 170453450 170453923 -80233931 + MLT2A1 LTR ERVL 1 444 0 1150 123 21 11 chr2 170453960 170454147 -80233707 - L1MC1 LINE L1 -2 6331 6143 616 157 0 0 chr2 170454147 170454249 -80233605 + L1MC1 LINE L1 6038 6139 -194 2189 102 13 13 chr2 170454249 170454554 -80233300 - AluSg SINE Alu -2 308 4 322 255 50 57 chr2 170454624 170454765 -80233089 - L2 LINE L2 -12 3260 3121 347 310 42 49 chr2 170455289 170455504 -80232350 - MIR SINE MIR -38 224 14 29 70 0 0 chr2 170455522 170455579 -80232275 + AT_rich Low_complexity Low_complexity 1 57 0 1858 162 0 19 chr2 170456473 170456651 -80231203 - AluJb SINE Alu -2 310 130 243 0 0 0 chr2 170456651 170456678 -80231176 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2085 125 0 0 chr2 170456678 170456958 -80230896 - AluSc SINE Alu -29 280 1 1858 162 0 19 chr2 170456958 170457092 -80230762 - AluJb SINE Alu -180 132 3 2192 105 7 3 chr2 170457252 170457548 -80230306 - AluSc SINE Alu -12 297 1 481 190 86 0 chr2 170457892 170458008 -80229846 - L1ME2 LINE L1 0 6164 6039 * 943 267 155 25 chr2 170458007 170458294 -80229560 - L1ME2 LINE L1 -480 5832 5469 2117 70 0 0 chr2 170458294 170458551 -80229303 - AluY SINE Alu -12 299 43 943 267 155 25 chr2 170458551 170458672 -80229182 - L1ME2 LINE L1 -843 5469 5365 296 301 29 10 chr2 170459507 170459610 -80228244 - MIR SINE MIR -95 167 63 535 266 65 91 chr2 170459737 170460045 -80227809 - MARNA DNA Mariner -17 569 270 971 78 0 72 chr2 170460096 170460249 -80227605 + L1PA8A LINE L1 5990 6131 0 259 261 29 14 chr2 170460330 170460399 -80227455 - LTR67 LTR ERVL -389 168 99 2302 175 177 23 chr2 170460431 170460963 -80226891 - LTR18B LTR ERVL 0 614 1 228 271 73 21 chr2 170461084 170461180 -80226674 + MIR3 SINE MIR 101 201 -7 2302 89 0 3 chr2 170461722 170462013 -80225841 + AluSc SINE Alu 1 290 -19 1674 225 125 20 chr2 170462182 170462671 -80225183 + MLT1H LTR MaLR 1 540 -9 401 290 85 0 chr2 170462749 170462925 -80224929 - L1ME4a LINE L1 -4 6117 5927 2359 76 7 3 chr2 170462954 170463257 -80224597 - AluY SINE Alu -7 304 1 2019 137 0 19 chr2 170463259 170463566 -80224288 - AluSx SINE Alu -8 304 4 27 0 0 0 chr2 170463585 170463612 -80224242 + AT_rich Low_complexity Low_complexity 1 27 0 252 196 0 18 chr2 170463768 170463824 -80224030 - L1M1 LINE L1 -749 5554 5500 2801 223 46 15 chr2 170463931 170464609 -80223245 - L1ME2 LINE L1 -10 6154 5456 526 284 56 74 chr2 170464921 170465054 -80222800 - L1ME4a LINE L1 -2063 5745 5611 1978 173 62 0 chr2 170465054 170465424 -80222430 + MLT2C1 LTR ERVL 1 393 -4 526 284 56 74 chr2 170465424 170465628 -80222226 - L1ME4a LINE L1 -2197 5611 5414 437 236 16 0 chr2 170465931 170466178 -80221676 + (TA)n Simple_repeat Simple_repeat 1 251 0 1576 201 28 0 chr2 170466454 170466619 -80221235 - AluJb SINE Alu -15 297 119 201 39 0 0 chr2 170466619 170466645 -80221209 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1576 201 28 0 chr2 170466645 170466768 -80221086 - AluJb SINE Alu -193 119 1 334 280 60 73 chr2 170466774 170467006 -80220848 - L1ME4a LINE L1 -1896 4250 4022 642 271 50 6 chr2 170467279 170467460 -80220394 - MER5A DNA MER1_type 0 189 1 842 287 117 32 chr2 170467773 170468216 -80219638 + MLT1J LTR MaLR 21 501 -10 2042 107 0 21 chr2 170468217 170468547 -80219307 - AluSx SINE Alu 0 324 1 342 0 0 0 chr2 170469123 170469161 -80218693 + (TG)n Simple_repeat Simple_repeat 1 38 0 958 228 5 14 chr2 170469581 170469792 -80218062 - MER63A DNA MER1_type 0 210 2 245 283 111 0 chr2 170470654 170470753 -80217101 + L1M LINE L1 5285 5394 -2414 980 167 17 11 chr2 170470755 170470929 -80216925 - FAM SINE Alu 0 175 1 224 378 11 0 chr2 170471338 170471428 -80216426 - MIR SINE MIR -1 261 171 577 271 81 46 chr2 170472364 170472736 -80215118 - MLT1H LTR MaLR -9 540 96 2085 101 0 50 chr2 170472941 170473258 -80214596 + AluSg SINE Alu 1 301 -9 534 273 91 14 chr2 170473817 170474037 -80213817 - LTR33A LTR ERVL 0 523 287 228 238 0 48 chr2 170525453 170525516 -80162338 + GA-rich Low_complexity Low_complexity 3 62 0 6008 198 8 2 chr2 170525873 170526929 -80160925 + L1M1 LINE L1 353 1415 -6150 1899 147 10 3 chr2 170527549 170527841 -80160013 + AluSx SINE Alu 1 294 -18 236 237 13 40 chr2 170528791 170528867 -80158987 + GA-rich Low_complexity Low_complexity 6 79 0 364 274 71 0 chr2 170529499 170529612 -80158242 - MIR3 SINE MIR -5 203 83 1225 121 0 11 chr2 170529816 170529998 -80157856 - L1MB3 LINE L1 -2 6181 6002 338 77 19 4 chr2 170530121 170530181 -80157673 + MADE1 DNA Mariner 35 80 0 5635 135 31 11 chr2 170531362 170533018 -80154836 - L1PA16 LINE L1 0 6166 4480 265 171 13 13 chr2 170533018 170533094 -80154760 - L1PA16 LINE L1 -2976 3170 3095 330 264 152 52 chr2 170533276 170533360 -80154494 + HAL1 LINE L1 2141 2215 -292 2246 100 3 3 chr2 170533360 170533661 -80154193 + AluSx SINE Alu 1 301 -11 330 264 152 52 chr2 170533661 170533845 -80154009 + HAL1 LINE L1 2215 2436 -71 21 0 0 0 chr2 170533989 170534010 -80153844 + AT_rich Low_complexity Low_complexity 1 21 0 278 269 11 54 chr2 170534355 170534448 -80153406 + MIR SINE MIR 49 137 -125 1817 132 77 0 chr2 170534952 170535225 -80152629 + AluSx SINE Alu 1 294 -18 190 278 37 0 chr2 170535232 170535286 -80152568 + L2 LINE L2 3225 3280 -33 2385 104 17 46 chr2 170536922 170537269 -80150585 + MER1B DNA MER1_type 1 337 0 299 221 37 73 chr2 170537280 170537416 -80150438 + MIR SINE MIR 132 262 0 416 248 127 32 chr2 170538218 170538375 -80149479 + MIR SINE MIR 61 232 -30 21 57 0 0 chr2 170538431 170538466 -80149388 + AT_rich Low_complexity Low_complexity 1 35 0 334 324 76 59 chr2 170538484 170538722 -80149132 + L3 LINE CR1 1029 1270 -307 1177 319 27 17 chr2 170538764 170539349 -80148505 - L1MEd LINE L1 -5494 625 4 23 54 0 0 chr2 170539352 170539389 -80148465 + AT_rich Low_complexity Low_complexity 1 37 0 216 0 0 0 chr2 170541153 170541177 -80146677 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1566 221 54 54 chr2 170542009 170542079 -80145775 + MER41B LTR ERV1 112 181 -454 2147 124 0 0 chr2 170542079 170542412 -80145442 + AluSg SINE Alu 1 333 0 1566 221 54 54 chr2 170542412 170542823 -80145031 + MER41B LTR ERV1 180 595 -40 1150 120 0 0 chr2 170544219 170544369 -80143485 + AluSg/x SINE Alu 154 303 -9 28 71 0 0 chr2 170544566 170544622 -80143232 + AT_rich Low_complexity Low_complexity 1 56 0 21 0 0 0 chr2 170544831 170544852 -80143002 + AT_rich Low_complexity Low_complexity 1 21 0 247 139 0 0 chr2 170544997 170545033 -80142821 + MER5B DNA MER1_type 3 38 -140 26 0 0 0 chr2 170545377 170545403 -80142451 + AT_rich Low_complexity Low_complexity 1 26 0 2601 110 39 6 chr2 170545764 170546127 -80141727 - THE1C LTR MaLR 0 375 1 237 294 0 0 chr2 170546999 170547067 -80140787 + CT-rich Low_complexity Low_complexity 2 69 0 21 0 0 0 chr2 170547444 170547465 -80140389 + AT_rich Low_complexity Low_complexity 1 21 0 875 209 144 9 chr2 170548204 170548448 -80139406 + MLT1J2 LTR MaLR 8 301 -149 570 186 90 32 chr2 170548503 170548659 -80139195 - MLT1F LTR MaLR 0 542 378 2258 96 7 3 chr2 170548738 170549040 -80138814 + AluY SINE Alu 1 303 -8 21 36 0 0 chr2 170549537 170549565 -80138289 + AT_rich Low_complexity Low_complexity 1 28 0 237 226 79 110 chr2 170550267 170550433 -80137421 + MIR SINE MIR 18 175 -63 * 535 294 127 56 chr2 170550415 170550809 -80137045 + L2 LINE L2 2851 3272 0 1704 222 31 86 chr2 170551343 170551892 -80135962 + MLT2B1 LTR ERVL 2 520 0 820 247 64 8 chr2 170552140 170552375 -80135479 + MLT1H1 LTR MaLR 9 256 -299 261 231 0 0 chr2 170552487 170552539 -80135315 + MLT1G1 LTR MaLR 544 595 0 1098 110 0 7 chr2 170552961 170553116 -80134738 + AluSg/x SINE Alu 131 284 -28 189 0 0 0 chr2 170553116 170553137 -80134717 + (CAAT)n Simple_repeat Simple_repeat 2 22 0 2326 64 34 7 chr2 170554172 170554469 -80133385 + AluY SINE Alu 1 305 -6 1049 216 53 20 chr2 170554496 170556136 -80131718 + L1ME LINE L1 3767 5552 -614 * 1620 230 39 54 chr2 170556122 170556682 -80131172 - L1ME1 LINE L1 -45 6121 5570 302 255 54 66 chr2 170556686 170556847 -80131007 - MIR SINE MIR -36 172 31 225 331 51 0 chr2 170557024 170557181 -80130673 - MER103 DNA DNA -1 165 1 625 228 124 51 chr2 170558037 170558431 -80129423 + LTR33 LTR ERVL 83 505 -16 1716 166 18 0 chr2 170559161 170559465 -80128389 + AluJb SINE Alu 1 309 0 1146 160 0 0 chr2 170559924 170560093 -80127761 - AluJo SINE Alu -7 305 137 746 198 0 0 chr2 170560799 170560925 -80126929 - AluJo SINE Alu -175 127 2 200 35 35 0 chr2 170561103 170561132 -80126722 + (GA)n Simple_repeat Simple_repeat 2 31 0 393 215 85 70 chr2 170561178 170561368 -80126486 - MLT1K LTR MaLR -1 587 395 1199 191 46 0 chr2 170561368 170561650 -80126204 + MER63 DNA MER1_type 3 297 -764 1185 201 80 20 chr2 170561660 170562009 -80125845 + MLT1B LTR MaLR 1 370 -20 588 239 94 0 chr2 170562030 170562231 -80125623 + MER63 DNA MER1_type 438 657 -404 1010 211 37 18 chr2 170562232 170562450 -80125404 + MER58A DNA MER1_type 3 224 0 * 1873 158 18 91 chr2 170562450 170562894 -80124960 + MER63 DNA MER1_type 649 1059 -2 701 328 37 52 chr2 170563226 170563686 -80124168 - L3 LINE CR1 -458 1119 667 209 344 16 0 chr2 170564561 170564622 -80123232 + L2 LINE L2 3231 3292 -21 840 137 8 8 chr2 170565787 170565918 -80121936 - AluJo SINE Alu -169 133 3 326 203 53 4 chr2 170566616 170566726 -80121128 - L1MC4 LINE L1 -1339 6983 1995 195 175 75 0 chr2 170566768 170566808 -80121046 - L2 LINE L2 -10 3303 3261 3486 159 47 6 chr2 170566886 170567541 -80120313 + L1MB3 LINE L1 5444 6125 -58 1575 179 3 44 chr2 170567544 170567841 -80120013 - AluJo SINE Alu -19 293 9 293 328 71 58 chr2 170567861 170568172 -80119682 - L2 LINE L2 -148 3165 2851 188 204 61 122 chr2 170568423 170568521 -80119333 + MER5A DNA MER1_type 61 152 -37 * 294 336 23 39 chr2 170568472 170568600 -80119254 + MIR SINE MIR 61 186 -76 1860 174 3 0 chr2 170568737 170569035 -80118819 + AluJb SINE Alu 1 299 -13 429 228 31 55 chr2 170569726 170569853 -80118001 + L2 LINE L2 3190 3313 0 714 182 49 0 chr2 170571718 170571892 -80115962 - L1MD3 LINE L1 -142 7825 7460 2121 116 3 7 chr2 170572334 170572627 -80115227 + AluSg SINE Alu 1 292 -18 2269 227 18 0 chr2 170572686 170573175 -80114679 + MLT1D LTR MaLR 1 498 -7 596 174 25 0 chr2 170573208 170573329 -80114525 + L1MA3 LINE L1 12 135 -7430 * 14931 147 30 10 chr2 170573325 170576329 -80111525 + L1MA3 LINE L1 1105 4046 -3678 4829 57 0 0 chr2 170576329 170576926 -80110928 + L1PA6 LINE L1 5550 6146 -8 14931 147 30 10 chr2 170576926 170580414 -80107440 + L1MA3 LINE L1 4046 7724 0 389 242 112 6 chr2 170581005 170581166 -80106688 - LTR67 LTR ERVL 0 557 380 1407 178 16 55 chr2 170581379 170581405 -80106449 + AluJo SINE Alu 1 26 -286 1670 133 57 78 chr2 170581405 170581639 -80106215 - THE1C LTR MaLR 0 375 151 2128 121 3 34 chr2 170581639 170581962 -80105892 - AluSq SINE Alu 0 313 1 1670 133 57 78 chr2 170581962 170582110 -80105744 - THE1C LTR MaLR -224 151 1 1407 178 16 55 chr2 170582110 170582392 -80105462 + AluJo SINE Alu 26 297 -15 250 289 9 114 chr2 170582402 170582613 -80105241 - LTR67 LTR ERVL -367 190 2 492 231 49 20 chr2 170582837 170583040 -80104814 + L1MC5 LINE L1 7732 7940 -21 11463 146 21 1 chr2 170583406 170584191 -80103663 + L1 LINE L1 2975 3743 -2403 2132 43 0 12 chr2 170584191 170584448 -80103406 + AluY SINE Alu 49 302 -9 11463 146 21 1 chr2 170584448 170585765 -80102089 + L1 LINE L1 3743 5119 -1027 548 250 41 0 chr2 170585759 170585931 -80101923 + L1MA6 LINE L1 18 196 -6667 * 11069 205 18 10 chr2 170585929 170589877 -80097977 + L1MA6 LINE L1 1392 5420 -1442 2789 123 31 2 chr2 170589977 170590084 -80097770 + L1PB1 LINE L1 5677 5779 -372 207 100 0 0 chr2 170590084 170590114 -80097740 + (TA)n Simple_repeat Simple_repeat 1 30 0 2789 123 31 2 chr2 170590114 170590463 -80097391 + L1PB1 LINE L1 5779 6146 -5 5032 161 12 35 chr2 170590471 170591563 -80096291 + L1MA6 LINE L1 5824 6887 -129 2163 97 28 0 chr2 170591563 170591853 -80096001 + AluSp SINE Alu 1 298 -15 5032 161 12 35 chr2 170591853 170591981 -80095873 + L1MA6 LINE L1 6887 7016 0 489 325 75 47 chr2 170593029 170593284 -80094570 + MIR SINE MIR 1 262 0 626 294 309 15 chr2 170593296 170593633 -80094221 + L2 LINE L2 2868 3303 -10 2265 96 0 20 chr2 170593742 170594044 -80093810 - AluSc SINE Alu -13 296 1 1110 193 5 5 chr2 170594272 170594459 -80093395 + AluJo SINE Alu 1 187 -125 5167 232 26 6 chr2 170594580 170596583 -80091271 - L1PA13 LINE L1 -3417 3380 1330 1787 326 8 13 chr2 170596676 170597283 -80090571 - L1PA13 LINE L1 -6183 604 1 210 143 0 0 chr2 170597549 170597584 -80090270 + (CAT)n Simple_repeat Simple_repeat 1 35 0 224 247 27 14 chr2 170598290 170598363 -80089491 + L2 LINE L2 2671 2744 -570 389 310 59 73 chr2 170598552 170598723 -80089131 + L2 LINE L2 3015 3182 -131 1435 223 103 73 chr2 170598723 170599364 -80088490 - MLT2F LTR ERVL 0 663 4 389 310 59 73 chr2 170599364 170599495 -80088359 + L2 LINE L2 3182 3313 0 929 194 17 11 chr2 170599510 170599685 -80088169 - AluJo SINE Alu -16 296 121 22 0 0 0 chr2 170599905 170599927 -80087927 + AT_rich Low_complexity Low_complexity 1 22 0 6603 128 21 9 chr2 170600762 170601859 -80085995 + HSMAR2 DNA Mariner 4 1113 -189 188 61 61 0 chr2 170601902 170601935 -80085919 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 920 221 0 0 chr2 170601935 170602093 -80085761 - AluJb SINE Alu -26 286 129 27746 99 51 48 chr2 170602093 170602760 -80085094 - L1PA7 LINE L1 -5 6149 5486 2029 137 3 3 chr2 170602760 170603059 -80084795 - AluSx SINE Alu -13 299 1 27746 99 51 48 chr2 170603059 170606039 -80081815 - L1PA7 LINE L1 -668 5486 2496 2489 66 17 0 chr2 170606039 170606340 -80081514 - AluY SINE Alu -5 306 1 27746 99 51 48 chr2 170606340 170608836 -80079018 - L1PA7 LINE L1 -3658 2496 9 291 326 0 11 chr2 170608902 170608994 -80078860 - L2 LINE L2 -55 3258 3168 2537 128 0 3 chr2 170609402 170609762 -80078092 - THE1B LTR MaLR -5 359 1 10978 109 32 40 chr2 170609762 170611354 -80076500 - THE1B-int LTR MaLR 0 1580 1 2449 140 37 0 chr2 170611355 170611705 -80076149 - THE1B LTR MaLR -1 363 1 1655 167 0 72 chr2 170612116 170612451 -80075403 + AluJb SINE Alu 1 311 -1 286 259 150 34 chr2 170612484 170612778 -80075076 + L1ME3A LINE L1 4373 4700 -1446 403 230 60 51 chr2 170612793 170613010 -80074844 + L1ME3A LINE L1 5087 5305 -841 562 303 50 72 chr2 170613018 170613416 -80074438 + L1ME3A LINE L1 5544 5883 -287 2253 108 10 0 chr2 170613416 170613723 -80074131 + AluSx SINE Alu 1 310 -2 562 303 50 72 chr2 170613723 170613768 -80074086 + L1ME3A LINE L1 5883 5927 -243 819 214 0 0 chr2 170614068 170614213 -80073641 - FRAM SINE Alu -30 146 2 483 345 90 33 chr2 170614997 170615606 -80072248 - L2 LINE L2 -346 2968 2325 967 183 16 16 chr2 170615820 170616006 -80071848 - L1MB7 LINE L1 -2 6182 5997 1284 177 0 33 chr2 170616467 170616682 -80071172 - AluJo SINE Alu -101 211 4 332 291 50 43 chr2 170617761 170617902 -80069952 + MIR SINE MIR 9 150 -112 879 284 97 37 chr2 170618651 170619084 -80068770 + LTR67 LTR ERVL 2 460 -97 926 231 113 40 chr2 170619232 170619850 -80068004 + MER20B DNA MER1_type 47 755 -28 1409 166 72 16 chr2 170621842 170622149 -80065705 + MER33 DNA MER1_type 1 324 0 32 26 0 0 chr2 170623523 170623562 -80064292 + AT_rich Low_complexity Low_complexity 1 39 0 1101 242 263 17 chr2 170623562 170623828 -80064026 - MLT1G1 LTR MaLR -61 529 330 219 36 0 0 chr2 170623828 170623856 -80063998 + (TG)n Simple_repeat Simple_repeat 1 28 0 186 43 0 0 chr2 170623855 170623878 -80063976 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 1101 242 263 17 chr2 170623856 170624082 -80063772 - MLT1G1 LTR MaLR -260 330 1 332 330 51 8 chr2 170624090 170624208 -80063646 - MIR SINE MIR -122 140 18 23 54 0 0 chr2 170624253 170624290 -80063564 + AT_rich Low_complexity Low_complexity 1 37 0 252 0 0 0 chr2 170624817 170624845 -80063009 + (A)n Simple_repeat Simple_repeat 1 28 0 2403 81 3 0 chr2 170624851 170625148 -80062706 + AluY SINE Alu 2 299 -12 254 241 0 0 chr2 170625729 170625783 -80062071 + GA-rich Low_complexity Low_complexity 2 55 0 396 259 78 102 chr2 170625785 170625990 -80061864 - MIR SINE MIR -6 256 57 239 331 74 25 chr2 170626121 170626242 -80061612 - L2 LINE L2 -14 3258 3132 259 273 74 40 chr2 170626516 170626692 -80061162 - L2 LINE L2 -454 2860 2679 4532 127 35 6 chr2 170628142 170628837 -80059017 - MER50 LTR ERV1 -12 722 8 1489 188 3 70 chr2 170629091 170629178 -80058676 - 7SLRNA srpRNA srpRNA -12 308 217 2517 129 89 5 chr2 170629178 170629573 -80058281 - MSTA LTR MaLR 0 428 1 1489 188 3 70 chr2 170629573 170629815 -80058039 - 7SLRNA srpRNA srpRNA -103 217 1 529 277 98 35 chr2 170630237 170630522 -80057332 - L2 LINE L2 -1 3312 3010 22 0 0 0 chr2 170631770 170631792 -80056062 + AT_rich Low_complexity Low_complexity 1 22 0 286 279 173 0 chr2 170632826 170632930 -80054924 + L2 LINE L2 3151 3272 0 240 192 0 19 chr2 170632990 170633042 -80054812 + CT-rich Low_complexity Low_complexity 2 52 0 628 318 54 17 chr2 170633061 170633300 -80054554 - MIR SINE MIR -14 248 1 814 283 50 29 chr2 170633371 170633695 -80054159 + MLT1I LTR MaLR 59 401 -8 23 33 0 0 chr2 170633877 170633907 -80053947 + AT_rich Low_complexity Low_complexity 1 30 0 2284 70 13 7 chr2 170634260 170634561 -80053293 - AluY SINE Alu -8 303 1 482 338 81 9 chr2 170634594 170634928 -80052926 - L3 LINE CR1 -27 1550 1193 201 289 0 0 chr2 170635226 170635278 -80052576 + CT-rich Low_complexity Low_complexity 3 54 0 241 345 18 36 chr2 170635656 170635766 -80052088 - L3 LINE CR1 -405 1172 1065 334 213 13 0 chr2 170635874 170635949 -80051905 + Charlie8 DNA MER1_type 2341 2416 -1 1734 142 4 0 chr2 170636349 170636596 -80051258 + AluSq SINE Alu 1 248 -65 234 0 0 0 chr2 170636599 170636625 -80051229 + (CAA)n Simple_repeat Simple_repeat 2 27 0 389 259 241 12 chr2 170636997 170637159 -80050695 + L3 LINE CR1 1378 1576 -1 1703 193 49 49 chr2 170637299 170637687 -80050167 + MSTD LTR MaLR 9 396 0 182 314 0 0 chr2 170638650 170638701 -80049153 - MIR SINE MIR -6 256 206 2168 78 33 0 chr2 170639187 170639490 -80048364 + AluSg SINE Alu 1 312 0 1790 150 68 14 chr2 170639929 170640222 -80047632 + 7SLRNA srpRNA srpRNA 1 309 -11 195 69 0 0 chr2 170641566 170641595 -80046259 + (ACATG)n Simple_repeat Simple_repeat 4 32 0 3219 255 118 25 chr2 170641912 170643171 -80044683 - L2 LINE L2 0 3313 1906 1723 181 68 37 chr2 170643171 170643525 -80044329 + MLT1A1 LTR MaLR 1 365 0 3219 255 118 25 chr2 170643525 170643711 -80044143 - L2 LINE L2 -1407 1906 1739 216 0 0 0 chr2 170643733 170643757 -80044097 + (TG)n Simple_repeat Simple_repeat 1 24 0 285 29 0 0 chr2 170644108 170644142 -80043712 + (CAT)n Simple_repeat Simple_repeat 2 35 0 206 250 39 0 chr2 170644383 170644435 -80043419 + C-rich Low_complexity Low_complexity 4 57 0 242 130 0 19 chr2 170644898 170644952 -80042902 + (CGG)n Simple_repeat Simple_repeat 3 55 0 202 293 0 13 chr2 170645256 170645331 -80042523 + (CG)n Simple_repeat Simple_repeat 2 75 0 1902 159 0 7 chr2 170648790 170649099 -80038755 - AluJo SINE Alu -5 307 1 180 97 0 0 chr2 170649576 170649607 -80038247 + (GA)n Simple_repeat Simple_repeat 1 31 0 857 127 0 8 chr2 170649958 170650084 -80037770 + AluJb SINE Alu 180 304 -8 1509 185 50 14 chr2 170651139 170651436 -80036418 - AluJo SINE Alu -4 308 1 341 288 136 5 chr2 170651606 170651797 -80036057 - MIR SINE MIR 0 262 47 498 244 35 38 chr2 170651849 170652188 -80035666 - L1ME4a LINE L1 -206 5915 5540 1870 169 0 3 chr2 170652228 170652523 -80035331 + AluJb SINE Alu 1 294 -18 342 0 0 0 chr2 170652777 170652815 -80035039 + (TG)n Simple_repeat Simple_repeat 1 38 0 1549 120 132 8 chr2 170652821 170653063 -80034791 - AluSg SINE Alu -38 272 1 3833 150 98 24 chr2 170653378 170653775 -80034079 + L1MB3 LINE L1 5376 5742 -441 2299 171 11 3 chr2 170653775 170654137 -80033717 - MLT1A1 LTR MaLR 0 365 1 3833 150 98 24 chr2 170654137 170654491 -80033363 + L1MB3 LINE L1 5742 6183 0 272 253 0 27 chr2 170655620 170655695 -80032159 + CT-rich Low_complexity Low_complexity 4 76 0 531 211 186 6 chr2 170657014 170657170 -80030684 + MIR SINE MIR 47 230 -32 519 234 74 51 chr2 170658173 170658348 -80029506 + MER97c DNA MER1_type? 1 179 -911 252 252 61 61 chr2 170658448 170658579 -80029275 - MIR3 SINE MIR -27 181 51 1220 171 58 46 chr2 170658705 170658945 -80028909 + AluJo SINE Alu 1 243 -69 374 194 0 101 chr2 170660813 170660952 -80026902 - L1ME3A LINE L1 -19 6151 6027 352 259 28 0 chr2 170661676 170661784 -80026070 - HAL1b LINE L1 -1152 196 86 23 0 0 0 chr2 170662327 170662350 -80025504 + AT_rich Low_complexity Low_complexity 1 23 0 972 194 29 0 chr2 170662513 170662683 -80025171 + FAM SINE Alu 1 175 0 330 245 79 36 chr2 170662955 170663094 -80024760 - L1ME LINE L1 -482 5639 5495 21 0 0 0 chr2 170664210 170664231 -80023623 + AT_rich Low_complexity Low_complexity 1 21 0 1927 205 113 21 chr2 170665039 170665573 -80022281 - MLT2B3 LTR ERVL -8 519 1 773 167 52 35 chr2 170665573 170665745 -80022109 - MLT1A1 LTR MaLR -16 349 175 384 88 0 0 chr2 170665763 170665820 -80022034 + (GA)n Simple_repeat Simple_repeat 1 57 0 533 172 52 15 chr2 170665826 170665960 -80021894 - MLT1A1 LTR MaLR -225 140 2 465 254 132 61 chr2 170666002 170666502 -80021352 - L1ME3A LINE L1 -225 5896 5351 388 183 39 39 chr2 170666726 170666830 -80021024 - HAL1 LINE L1 -1806 701 598 492 281 70 12 chr2 170666867 170667109 -80020745 - HAL1 LINE L1 -2000 507 252 487 214 221 21 chr2 170667118 170667263 -80020591 + MER5A DNA MER1_type 9 182 -7 2349 97 3 0 chr2 170668199 170668508 -80019346 - AluSp SINE Alu -3 310 1 260 299 185 6 chr2 170668562 170668719 -80019135 + MIR SINE MIR 53 237 -25 516 254 55 44 chr2 170669005 170669186 -80018668 - MIR3 SINE MIR -5 203 21 2265 87 3 0 chr2 170669734 170670023 -80017831 + AluY SINE Alu 1 290 -21 667 251 16 11 chr2 170671701 170671884 -80015970 - MIR SINE MIR -1 261 78 951 174 62 0 chr2 170672419 170672597 -80015257 - MER5A DNA MER1_type 0 189 1 2370 94 3 3 chr2 170672739 170673076 -80014778 - AluSp SINE Alu 0 343 7 4551 183 61 30 chr2 170673777 170675270 -80012584 - L1MC2 LINE L1 0 6278 4743 1445 155 43 53 chr2 170676316 170676619 -80011235 - AluJo SINE Alu -12 300 1 1926 267 96 32 chr2 170676972 170678725 -80009129 - L1MC2 LINE L1 -3802 2278 411 288 332 66 13 chr2 170678722 170678948 -80008906 - L1MC2 LINE L1 -5576 494 257 * 192 40 0 0 chr2 170679047 170679072 -80008782 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7007 45 15 0 chr2 170680236 170681369 -80006485 - L1PA7 LINE L1 -1 6153 5003 321 271 122 0 chr2 170681993 170682100 -80005754 - MIR SINE MIR -138 124 5 279 301 7 59 chr2 170682104 170682240 -80005614 - L2 LINE L2 -44 3269 3141 211 133 40 67 chr2 170682405 170682480 -80005374 + (TATAA)n Simple_repeat Simple_repeat 2 74 0 275 313 26 35 chr2 170682778 170682893 -80004961 + L2 LINE L2 3115 3228 -44 895 230 88 4 chr2 170682897 170683123 -80004731 + MIR SINE MIR 5 249 -13 2580 160 20 4 chr2 170683197 170683647 -80004207 - LTR32 LTR ERVL 0 471 15 435 222 9 9 chr2 170684772 170684880 -80002974 - L1MC/D LINE L1 -2036 5772 5665 229 238 79 30 chr2 170685079 170685180 -80002674 + L2 LINE L2 3200 3305 -8 21 0 0 0 chr2 170685241 170685262 -80002592 + AT_rich Low_complexity Low_complexity 1 21 0 241 116 0 47 chr2 170685878 170685921 -80001933 - L2 LINE L2 -8 3305 3265 180 0 0 0 chr2 170685974 170685994 -80001860 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 227 77 0 26 chr2 170686005 170686044 -80001810 + (GAAA)n Simple_repeat Simple_repeat 1 38 0 829 264 190 8 chr2 170686101 170686490 -80001364 - L2 LINE L2 -254 3059 2588 2713 203 49 30 chr2 170686927 170687627 -80000227 - MER72 LTR ERV1 0 722 10 1680 196 44 11 chr2 170687636 170687999 -79999855 - MER72-int LTR ERV1 0 6758 6384 349 244 49 8 chr2 170688151 170688274 -79999580 - MER84-int LTR ERV1 -500 4454 4327 436 157 17 113 chr2 170689808 170689923 -79997931 - MER84-int LTR ERV1 -4238 3882 3779 210 235 20 0 chr2 170690968 170691019 -79996835 + GA-rich Low_complexity Low_complexity 6 57 0 2247 123 21 21 chr2 170691554 170691927 -79995927 + THE1C LTR MaLR 3 375 0 1208 169 169 15 chr2 170692733 170692994 -79994860 + AluJo SINE Alu 1 301 -1 276 211 75 95 chr2 170693088 170693235 -79994619 - ERVL LTR ERVL -3087 2677 2534 1930 161 3 19 chr2 170693699 170694016 -79993838 + AluJb SINE Alu 1 312 0 2183 246 99 29 chr2 170695521 170695641 -79992213 - L1MD3 LINE L1 -5 8037 7927 225 94 0 0 chr2 170695641 170695673 -79992181 + (TG)n Simple_repeat Simple_repeat 1 32 0 2183 246 99 29 chr2 170695673 170696436 -79991418 - L1MD3 LINE L1 -115 7927 7094 2586 62 3 3 chr2 170697136 170697474 -79990380 + L1PA7 LINE L1 5813 6150 -4 239 333 104 7 chr2 170698105 170698249 -79989605 + MIR3 SINE MIR 45 202 -6 751 190 0 0 chr2 170698383 170698520 -79989334 + FLAM_C SINE Alu 1 137 -6 1514 179 83 12 chr2 170698893 170699218 -79988636 + Tigger3(Golem) DNA MER2_type 2681 3028 -1 302 202 37 64 chr2 170699257 170699366 -79988488 - HAL1 LINE L1 -412 2095 1990 472 300 30 79 chr2 170699370 170699637 -79988217 - MIR SINE MIR -8 254 1 751 294 157 36 chr2 170699694 170700337 -79987517 - HAL1 LINE L1 -616 1891 1171 488 139 69 0 chr2 170700351 170700452 -79987402 - L1ME1 LINE L1 -9 6157 6050 2508 150 0 45 chr2 170700453 170700555 -79987299 + L1MB3 LINE L1 5712 5817 -366 270 0 0 0 chr2 170700555 170700585 -79987269 + (CA)n Simple_repeat Simple_repeat 1 30 0 2508 150 0 45 chr2 170700585 170700976 -79986878 + L1MB3 LINE L1 5817 6183 0 527 264 52 64 chr2 170701015 170701264 -79986590 - HAL1 LINE L1 -1322 1185 942 2330 108 0 0 chr2 170701264 170701570 -79986284 - AluSg SINE Alu -4 306 1 527 264 52 64 chr2 170701570 170701744 -79986110 - HAL1 LINE L1 -1565 942 767 2846 177 58 8 chr2 170701745 170702367 -79985487 - L1MC3 LINE L1 0 7785 7133 264 308 90 39 chr2 170703409 170703565 -79984289 - MIR3 SINE MIR -15 193 30 23 78 0 0 chr2 170704934 170704985 -79982869 + AT_rich Low_complexity Low_complexity 1 51 0 611 308 40 36 chr2 170705038 170705262 -79982592 + MIR SINE MIR 9 233 -29 286 311 57 9 chr2 170705422 170705528 -79982326 - L3 LINE CR1 -154 1423 1313 2102 132 0 6 chr2 170705814 170706163 -79981691 + AluSx SINE Alu 1 312 0 333 292 236 0 chr2 170707549 170707693 -79980161 + MER5B DNA MER1_type 1 178 0 4791 125 10 5 chr2 170707976 170709186 -79978668 - L1PA16 LINE L1 -5 6161 5000 2283 111 3 0 chr2 170709200 170709506 -79978348 - AluSx SINE Alu -1 311 5 1851 136 0 52 chr2 170711138 170711447 -79976407 - AluJb SINE Alu -19 293 1 34 42 0 0 chr2 170713425 170713473 -79974381 + AT_rich Low_complexity Low_complexity 1 48 0 411 299 121 24 chr2 170713529 170713736 -79974118 + L3 LINE CR1 1198 1424 -153 1023 191 5 0 chr2 170713784 170713972 -79973882 - MER5A DNA MER1_type 0 189 1 368 300 153 20 chr2 170713986 170714136 -79973718 - MER5A DNA MER1_type -7 182 13 231 348 0 54 chr2 170714145 170714257 -79973597 + L3 LINE CR1 1465 1570 -7 501 244 197 9 chr2 170715085 170715298 -79972556 - MIR SINE MIR -6 256 4 755 213 154 0 chr2 170715559 170715780 -79972074 + LTR50 LTR ERVL 1 255 -540 1623 141 30 30 chr2 170715806 170716057 -79971797 - L1MC1 LINE L1 -5 6328 6075 1192 204 35 108 chr2 170716057 170716329 -79971525 - MSTD LTR MaLR 0 396 165 1653 203 0 3 chr2 170716329 170716620 -79971234 - AluJb SINE Alu -22 290 1 1192 204 35 108 chr2 170716620 170716774 -79971080 - MSTD LTR MaLR -231 165 1 1623 141 30 30 chr2 170716774 170716827 -79971027 - L1MC1 LINE L1 -257 6076 6024 478 167 241 6 chr2 170716972 170717146 -79970708 + LTR50 LTR ERVL 580 794 -1 254 245 196 10 chr2 170717330 170717432 -79970422 + MIR SINE MIR 20 140 -68 240 326 35 35 chr2 170718290 170718431 -79969423 + MIR SINE MIR 96 236 -26 412 282 125 42 chr2 170719615 170719902 -79967952 + L3b LINE CR1 1120 1430 -153 320 206 0 0 chr2 170719909 170719977 -79967877 - L1MD1 LINE L1 -11 6231 6164 2301 95 3 0 chr2 170720140 170720435 -79967419 + AluSx SINE Alu 3 298 -14 312 269 121 7 chr2 170721333 170721474 -79966380 - L1ME4a LINE L1 -31 6090 5934 1025 84 32 0 chr2 170721774 170721929 -79965925 - L1P LINE L1 -2411 3735 3576 1023 98 37 12 chr2 170721999 170722163 -79965691 - L1P LINE L1 -1949 4197 4030 3669 174 16 41 chr2 170722163 170723673 -79964181 - L1P3 LINE L1 -4345 2116 592 2317 89 3 0 chr2 170724473 170724777 -79963077 + AluSc SINE Alu 1 305 -4 694 131 0 0 chr2 170725141 170725248 -79962606 - MER45 DNA AcHobo -3 1578 1472 578 313 107 30 chr2 170726055 170726288 -79961566 + MIR SINE MIR 12 262 0 860 215 39 73 chr2 170727714 170727974 -79959880 + MIR SINE MIR 3 253 -9 188 337 122 0 chr2 170728372 170728470 -79959384 + MIR SINE MIR 20 129 -79 353 324 32 36 chr2 170728516 170728769 -79959085 - HAL1 LINE L1 -2254 253 2 3565 133 18 3 chr2 170728988 170729559 -79958295 - L1P3 LINE L1 -5293 582 4 248 257 0 10 chr2 170729584 170729685 -79958169 - L1M LINE L1 -2392 5416 5317 269 214 182 58 chr2 170729735 170729889 -79957965 - L1M4 LINE L1 -694 5490 5318 26 50 0 0 chr2 170730309 170730349 -79957505 + AT_rich Low_complexity Low_complexity 1 40 0 357 226 54 0 chr2 170730380 170730473 -79957381 + L1MA9 LINE L1 6176 6273 -39 352 303 95 60 chr2 170730500 170730817 -79957037 + L1ME4a LINE L1 5791 6118 -3 1871 286 109 35 chr2 170731533 170732656 -79955198 + L2 LINE L2 2088 3298 -15 2797 3 0 0 chr2 170732871 170733173 -79954681 - AluYa5 SINE Alu -9 302 1 347 293 115 26 chr2 170733206 170733397 -79954457 + MIR SINE MIR 42 249 -13 491 259 107 18 chr2 170733850 170734074 -79953780 - L1MEc LINE L1 -4577 2144 1901 307 123 175 0 chr2 170734146 170734203 -79953651 + MER7A DNA MER2_type 41 105 -241 664 108 25 50 chr2 170734206 170734326 -79953528 - THE1C LTR MaLR -51 324 208 1182 154 47 26 chr2 170734345 170734579 -79953275 + MER7A DNA MER2_type 98 336 0 538 253 92 43 chr2 170734580 170734804 -79953050 - L1MEc LINE L1 -4685 1855 1643 2137 153 65 19 chr2 170734804 170735217 -79952637 - MSTB1 LTR MaLR 0 432 1 538 253 92 43 chr2 170735217 170735438 -79952416 - L1MEc LINE L1 -4897 1643 1388 691 295 62 50 chr2 170735499 170736045 -79951809 - L1MEc LINE L1 -5445 1085 533 1313 186 7 25 chr2 170736125 170736405 -79951449 - L1MD2 LINE L1 -3 6356 6082 2080 128 6 19 chr2 170736592 170736905 -79950949 - AluSx SINE Alu -3 309 1 253 151 0 75 chr2 170737923 170737976 -79949878 - L2 LINE L2 0 3313 3265 270 188 47 0 chr2 170738275 170738339 -79949515 + MIR SINE MIR 126 192 -70 287 339 0 0 chr2 170738984 170739102 -79948752 + (TA)n Simple_repeat Simple_repeat 1 118 0 233 293 27 27 chr2 170739109 170739184 -79948670 - MIR SINE MIR -122 140 66 22 35 0 0 chr2 170739402 170739431 -79948423 + AT_rich Low_complexity Low_complexity 1 29 0 976 198 10 20 chr2 170742673 170742875 -79944979 - MER45C DNA AcHobo -738 215 16 335 300 79 29 chr2 170743093 170743233 -79944621 + MIR SINE MIR 45 191 -71 440 17 0 17 chr2 170744040 170744098 -79943756 + (CA)n Simple_repeat Simple_repeat 2 58 0 21 36 0 0 chr2 170745039 170745067 -79942787 + AT_rich Low_complexity Low_complexity 1 28 0 535 309 160 26 chr2 170745069 170745613 -79942241 + HAL1b LINE L1 281 897 -451 1553 174 37 79 chr2 170745994 170746401 -79941453 + MLT1B LTR MaLR 1 390 0 373 302 177 39 chr2 170746497 170747033 -79940821 + L1MC4a LINE L1 2348 2957 -3189 23 33 0 0 chr2 170747199 170747229 -79940625 + AT_rich Low_complexity Low_complexity 1 30 0 402 21 0 0 chr2 170747413 170747460 -79940394 + (TG)n Simple_repeat Simple_repeat 2 48 0 345 261 0 0 chr2 170747668 170747756 -79940098 - L1MA9 LINE L1 -38 6274 6187 232 314 45 37 chr2 170747767 170748009 -79939845 + L1MC4a LINE L1 3545 3788 -2358 430 279 52 52 chr2 170748480 170748563 -79939291 + L1MC4a LINE L1 4287 4369 -1777 1638 185 3 32 chr2 170748563 170748877 -79938977 + AluJb SINE Alu 1 305 -7 430 279 52 52 chr2 170748877 170749022 -79938832 + L1MC4a LINE L1 4368 4515 -1631 1114 285 89 31 chr2 170749259 170750268 -79937586 + L1MC4a LINE L1 4927 5395 -751 2373 77 0 0 chr2 170750278 170750575 -79937279 + AluY SINE Alu 1 297 -14 1284 172 37 84 chr2 170751001 170751384 -79936470 - MLT1A1 LTR MaLR 0 365 1 180 0 0 0 chr2 170751425 170751445 -79936409 + (TA)n Simple_repeat Simple_repeat 2 21 0 1866 142 111 15 chr2 170751685 170752017 -79935837 - THE1B LTR MaLR 0 364 1 311 122 0 20 chr2 170752103 170752152 -79935702 - MIR SINE MIR -56 152 105 189 0 0 0 chr2 170752463 170752484 -79935370 + (TTG)n Simple_repeat Simple_repeat 1 21 0 223 317 174 36 chr2 170753364 170753531 -79934323 + L3b LINE CR1 1380 1569 -14 1180 219 43 101 chr2 170753940 170754456 -79933398 - LTR5 LTR ERVK 0 969 484 380 225 238 0 chr2 170754796 170754923 -79932931 - MER5A DNA MER1_type -23 166 4 2456 72 0 0 chr2 170755205 170755498 -79932356 + AluY SINE Alu 1 293 -18 298 359 24 18 chr2 170756934 170757104 -79930750 - MER5B DNA MER1_type -1 177 7 27 29 0 0 chr2 170757695 170757729 -79930125 + AT_rich Low_complexity Low_complexity 1 34 0 1370 203 121 7 chr2 170759032 170759338 -79928516 - MER58B DNA MER1_type 0 341 1 1369 194 167 3 chr2 170760737 170761066 -79926788 - MLT1B LTR MaLR -7 383 1 462 296 94 24 chr2 170761405 170761618 -79926236 + MIR SINE MIR 8 235 -27 278 292 51 56 chr2 170762171 170762349 -79925505 + MIR SINE MIR 50 226 -36 1315 121 0 15 chr2 170763147 170763345 -79924509 - L1MA2 LINE L1 -4 6300 6106 395 259 72 43 chr2 170763816 170763955 -79923899 - MIR SINE MIR -72 190 48 220 156 16 47 chr2 170763984 170764048 -79923806 + (TATAA)n Simple_repeat Simple_repeat 2 63 0 339 333 57 14 chr2 170764239 170764380 -79923474 + L2 LINE L2 3126 3272 0 482 194 0 0 chr2 170764576 170764674 -79923180 + L1PB1 LINE L1 6053 6150 -1 24 32 0 0 chr2 170764937 170764968 -79922886 + AT_rich Low_complexity Low_complexity 1 31 0 405 0 0 0 chr2 170765842 170765887 -79921967 + (TG)n Simple_repeat Simple_repeat 2 46 0 338 263 22 66 chr2 170766010 170766147 -79921707 + MIR SINE MIR 118 248 -14 193 286 135 39 chr2 170766562 170766706 -79921148 + MIR SINE MIR 67 233 -29 1795 122 100 61 chr2 170766706 170767067 -79920787 - THE1C LTR MaLR 0 375 1 193 286 135 39 chr2 170767067 170767100 -79920754 + MIR SINE MIR 233 261 -1 246 275 107 61 chr2 170767262 170767393 -79920461 + L2 LINE L2 2909 3045 -227 452 263 187 0 chr2 170767425 170767596 -79920258 - L2 LINE L2 -1741 1573 1371 231 319 0 0 chr2 170767840 170767912 -79919942 - L2 LINE L2 -1 3312 3241 496 170 21 154 chr2 170768041 170768207 -79919647 - L1MC4 LINE L1 0 8042 7902 207 100 0 0 chr2 170768207 170768237 -79919617 + (CATA)n Simple_repeat Simple_repeat 2 31 0 496 170 21 154 chr2 170768237 170768258 -79919596 - L1MC4 LINE L1 -140 7902 7880 2449 255 187 7 chr2 170768279 170769327 -79918527 - L2 LINE L2 -779 2535 1299 21 36 0 0 chr2 170770412 170770440 -79917414 + AT_rich Low_complexity Low_complexity 1 28 0 418 208 36 2 chr2 170770521 170770625 -79917229 - L1MC5 LINE L1 0 8042 7838 252 276 109 40 chr2 170771208 170771382 -79916472 + L2 LINE L2 2791 2976 -338 859 288 123 42 chr2 170771601 170772495 -79915359 - L1MEd LINE L1 -4044 2266 1446 2210 125 0 0 chr2 170772495 170772791 -79915063 - AluSx SINE Alu -16 296 1 859 288 123 42 chr2 170772791 170773420 -79914434 - L1MEd LINE L1 -4864 1446 565 224 312 285 5 chr2 170775416 170775602 -79912252 - MIR SINE MIR -7 255 18 294 318 109 0 chr2 170776748 170776858 -79910996 - L2 LINE L2 0 3313 3192 302 358 44 7 chr2 170776891 170777028 -79910826 + MIR SINE MIR 3 144 -118 1339 159 0 10 chr2 170777468 170777675 -79910179 - AluJb SINE Alu -24 288 84 356 345 40 10 chr2 170778159 170778359 -79909495 + MIR SINE MIR 51 256 -6 1865 155 9 25 chr2 170778361 170778678 -79909176 + AluSx SINE Alu 1 312 0 28 71 0 0 chr2 170779179 170779235 -79908619 + AT_rich Low_complexity Low_complexity 1 56 0 213 235 20 0 chr2 170779347 170779398 -79908456 - MIR SINE MIR -8 254 203 1380 182 47 25 chr2 170779417 170779692 -79908162 - AluJo SINE Alu -31 281 1 3938 143 32 34 chr2 170779699 170780223 -79907631 - L1MB3 LINE L1 -2 6181 5658 180 0 0 0 chr2 170780223 170780243 -79907611 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1590 164 48 4 chr2 170780243 170780512 -79907342 - AluSx SINE Alu -31 281 1 3938 143 32 34 chr2 170780512 170780693 -79907161 - L1MB3 LINE L1 -523 5660 5476 273 294 188 12 chr2 170780761 170780921 -79906933 - MIR SINE MIR -56 206 19 24 0 0 0 chr2 170781106 170781130 -79906724 + AT_rich Low_complexity Low_complexity 1 24 0 263 253 0 33 chr2 170781317 170781408 -79906446 - L1ME LINE L1 -440 5681 5594 543 285 6 45 chr2 170782167 170782346 -79905508 - MIR SINE MIR -18 244 73 302 271 60 50 chr2 170782481 170782680 -79905174 - L1ME LINE L1 -304 5817 5617 2048 212 45 45 chr2 170784356 170784861 -79902993 - MLT1D LTR MaLR 0 505 1 275 0 29 0 chr2 170785062 170785097 -79902757 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1824 137 11 11 chr2 170785851 170786128 -79901726 + AluJo SINE Alu 14 290 -22 265 227 45 0 chr2 170786128 170786194 -79901660 - L2 LINE L2 -2 3270 3202 1030 92 0 0 chr2 170787502 170787632 -79900222 + FLAM_C SINE Alu 1 130 -3 1755 145 80 7 chr2 170788087 170788363 -79899491 - AluSg SINE Alu -14 296 1 2441 152 37 48 chr2 170788626 170789088 -79898766 - LTR32 LTR ERVL 0 471 15 189 0 0 0 chr2 170791722 170791743 -79896111 + (TC)n Simple_repeat Simple_repeat 2 22 0 2228 92 0 0 chr2 170791743 170792035 -79895819 - AluY SINE Alu -19 292 1 2177 113 7 0 chr2 170793088 170793381 -79894473 - AluSx SINE Alu -17 295 1 180 0 0 0 chr2 170795922 170795942 -79891912 + (TG)n Simple_repeat Simple_repeat 2 21 0 363 269 0 0 chr2 170795946 170796024 -79891830 + MER58 DNA MER1_type 1 78 -137 2663 120 50 26 chr2 170796024 170796442 -79891412 + MSTA LTR MaLR 1 428 0 9197 139 36 45 chr2 170796442 170797921 -79889933 + MSTA-int LTR MaLR 1 1465 -186 681 152 0 0 chr2 170797921 170798026 -79889828 - U6 snRNA snRNA -2 105 1 9197 139 36 45 chr2 170798026 170798210 -79889644 + MSTA-int LTR MaLR 1465 1649 -2 2799 101 48 14 chr2 170798212 170798626 -79889228 + MSTA LTR MaLR 1 428 0 527 208 20 0 chr2 170798691 170798792 -79889062 + MER58 DNA MER1_type 2318 2420 0 2374 99 0 0 chr2 170798906 170799209 -79888645 - AluSc SINE Alu -6 303 1 225 306 0 0 chr2 170799455 170799517 -79888337 - MER113 DNA MER1_type? -104 417 356 2637 197 98 32 chr2 170799573 170800368 -79887486 - L1MB8 LINE L1 -174 6004 5167 523 200 33 0 chr2 170800730 170800820 -79887034 - FRAM SINE Alu -83 93 1 2510 70 0 0 chr2 170801504 170801806 -79886048 - AluY SINE Alu -9 302 1 272 301 80 9 chr2 170801883 170801996 -79885858 + L2 LINE L2 3190 3310 -3 21 0 0 0 chr2 170802100 170802121 -79885733 + AT_rich Low_complexity Low_complexity 1 21 0 2236 126 0 3 chr2 170802328 170802638 -79885216 - AluSx SINE Alu -3 309 1 244 219 0 0 chr2 170802906 170802947 -79884907 + Charlie8 DNA MER1_type 1388 1428 -989 21 57 0 0 chr2 170803250 170803285 -79884569 + AT_rich Low_complexity Low_complexity 1 35 0 636 271 84 15 chr2 170803567 170803770 -79884084 - MIR SINE MIR 0 262 46 353 309 9 0 chr2 170805762 170805872 -79881982 + (CATATA)n Simple_repeat Simple_repeat 4 114 0 13966 189 33 13 chr2 170805949 170811542 -79876312 + L1PB1 LINE L1 616 6508 -359 447 19 0 0 chr2 170811542 170811594 -79876260 + (CA)n Simple_repeat Simple_repeat 1 52 0 13966 189 33 13 chr2 170811594 170811962 -79875892 + L1PB1 LINE L1 6508 6867 0 269 239 56 0 chr2 170812051 170812122 -79875732 - MIR SINE MIR -70 192 118 1770 144 0 0 chr2 170812291 170812547 -79875307 - AluJo SINE Alu -10 302 47 1485 118 36 0 chr2 170813689 170813910 -79873944 + MER30 DNA MER1_type 2 230 0 397 222 95 0 chr2 170814737 170814863 -79872991 + L1MA9 LINE L1 5941 6078 -234 1947 127 0 14 chr2 170866423 170866707 -79821147 - AluJo SINE Alu -30 282 3 2469 60 0 0 chr2 170866872 170867170 -79820684 - AluY SINE Alu -13 298 1 883 258 26 15 chr2 170867490 170867758 -79820096 + AluY SINE Alu 1 271 -40 193 352 0 0 chr2 170869039 170869093 -79818761 + L2 LINE L2 3041 3094 -178 383 246 9 18 chr2 170869575 170869689 -79818165 - MER34C LTR ERV1 0 585 473 1350 170 121 4 chr2 170869887 170870152 -79817702 + AluJb SINE Alu 1 296 -6 983 218 160 0 chr2 170871452 170871746 -79816108 - MLT1D LTR MaLR -164 341 1 2448 85 3 0 chr2 170872608 170872913 -79814941 + AluSg SINE Alu 1 306 -4 243 0 0 0 chr2 170872913 170872940 -79814914 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 432 0 0 0 chr2 170872939 170872987 -79814867 + (GA)n Simple_repeat Simple_repeat 2 49 0 34 18 0 36 chr2 170873301 170873334 -79814520 + AT_rich Low_complexity Low_complexity 1 33 -21 12796 184 27 6 chr2 170873334 170876839 -79811015 - L1PA14 LINE L1 -5 6156 2597 34 18 0 36 chr2 170876839 170876861 -79810993 + AT_rich Low_complexity Low_complexity 33 54 0 251 272 224 0 chr2 170876998 170877123 -79810731 - MIR SINE MIR -75 187 35 1806 133 78 39 chr2 170879240 170879601 -79808253 - THE1C LTR MaLR 0 375 1 2041 133 20 0 chr2 170882063 170882364 -79805490 + AluSq SINE Alu 1 307 -6 192 306 81 81 chr2 170882656 170882767 -79805087 - MIR SINE MIR -73 135 25 4284 187 36 12 chr2 170882802 170883786 -79804068 + L1MA9 LINE L1 5266 6272 -40 6002 125 136 115 chr2 170884138 170885802 -79802052 - pTR5 LTR ERV1 0 2438 741 698 256 26 21 chr2 170885802 170885993 -79801861 + MIR SINE MIR 1 192 -70 684 254 132 18 chr2 170886420 170886640 -79801214 - MIR SINE MIR -3 259 15 317 324 20 29 chr2 170887510 170887612 -79800242 + L2 LINE L2 3150 3250 -22 2303 83 0 10 chr2 170890243 170890544 -79797310 + AluSq SINE Alu 1 298 -15 942 122 8 0 chr2 170891213 170891344 -79796510 - FLAM_C SINE Alu -11 132 1 203 171 0 0 chr2 170891624 170891665 -79796189 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 634 279 85 50 chr2 170891953 170892177 -79795677 + MLT1J LTR MaLR 113 357 -154 4375 65 2 0 chr2 170892177 170892729 -79795125 - MER41A LTR ERV1 -1 553 1 634 279 85 50 chr2 170892729 170892881 -79794973 + MLT1J LTR MaLR 357 502 -9 187 200 36 18 chr2 170893271 170893326 -79794528 - MIR SINE MIR -83 179 124 416 267 121 29 chr2 170893354 170893560 -79794294 + L2 LINE L2 3080 3304 -9 312 347 0 21 chr2 170893566 170893661 -79794193 - MIR SINE MIR -169 93 1 3164 158 71 40 chr2 170893729 170893749 -79794105 - L1MC2 LINE L1 0 6344 6326 351 0 0 0 chr2 170893749 170893788 -79794066 + (TG)n Simple_repeat Simple_repeat 2 40 0 3164 158 71 40 chr2 170893788 170894470 -79793384 - L1MC2 LINE L1 -18 6326 5620 181 279 63 38 chr2 170895400 170895479 -79792375 + L2 LINE L2 2404 2484 -830 295 309 61 45 chr2 170895934 170896180 -79791674 + L2 LINE L2 2265 2514 -800 1980 139 0 23 chr2 170896241 170896550 -79791304 - AluSx SINE Alu -10 302 1 892 258 68 80 chr2 170896821 170897321 -79790533 - MLT1J LTR MaLR -3 508 15 737 252 32 86 chr2 170898449 170898763 -79789091 + L2 LINE L2 3002 3298 -15 2063 113 0 21 chr2 170898777 170899061 -79788793 - AluSc SINE Alu -31 278 1 397 307 84 39 chr2 170901329 170901508 -79786346 - MIR3 SINE MIR -21 187 1 3902 195 87 63 chr2 170902598 170902756 -79785098 - Charlie1a DNA MER1_type -1306 1455 1302 2017 102 11 4 chr2 170902756 170903066 -79784788 - AluSc SINE Alu 0 314 3 3902 195 87 63 chr2 170903066 170903099 -79784755 - Charlie1a DNA MER1_type -1459 1302 1271 1932 142 0 3 chr2 170903099 170903401 -79784453 + AluJb SINE Alu 1 301 0 3902 195 87 63 chr2 170903401 170903483 -79784371 - Charlie1a DNA MER1_type -1490 1271 1192 2353 101 0 0 chr2 170903483 170903781 -79784073 - AluSc SINE Alu -11 298 1 3902 195 87 63 chr2 170903781 170904784 -79783070 - Charlie1a DNA MER1_type -1569 1192 145 3944 56 6 23 chr2 170904818 170905294 -79782560 - L1PA7 LINE L1 0 6154 5686 2378 94 3 0 chr2 170905294 170905593 -79782261 - AluSp SINE Alu -13 300 1 3944 56 6 23 chr2 170905593 170905636 -79782218 - L1PA7 LINE L1 -468 5686 5644 2277 47 0 3 chr2 170905634 170905933 -79781921 + L1P3 LINE L1 5287 5584 -570 620 227 47 7 chr2 170905935 170906085 -79781769 - Charlie1a DNA MER1_type -1299 156 1 3673 156 35 9 chr2 170906584 170907268 -79780586 + L1MA6 LINE L1 5598 6299 -1 225 315 114 71 chr2 170908239 170908371 -79779483 + L2 LINE L2 2938 3063 -209 985 198 164 46 chr2 170908371 170908695 -79779159 + MLT1A1 LTR MaLR 1 362 -3 225 315 114 71 chr2 170908695 170908870 -79778984 + L2 LINE L2 3063 3258 -14 3825 133 35 1 chr2 170909317 170909976 -79777878 - L1MA5 LINE L1 -24 6276 5596 321 251 80 96 chr2 170910025 170910276 -79777578 - L1ME4a LINE L1 -6 6115 5869 23 0 0 0 chr2 170910819 170910842 -79777012 + AT_rich Low_complexity Low_complexity 1 23 0 411 188 12 0 chr2 170910947 170911027 -79776827 - L1ME4a LINE L1 -493 5628 5548 348 273 63 28 chr2 170911134 170911277 -79776577 - L1ME4a LINE L1 -754 5392 5245 979 224 21 63 chr2 170913843 170914178 -79773676 - MLT1B LTR MaLR -4 386 66 186 43 0 0 chr2 170914199 170914222 -79773632 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 231 314 28 33 chr2 170914485 170914600 -79773254 + MIR SINE MIR 5 121 -87 236 228 18 0 chr2 170914712 170914769 -79773085 - MLT1J LTR MaLR -66 445 388 394 219 24 0 chr2 170915193 170915275 -79772579 + MER5A DNA MER1_type 11 94 -95 200 225 0 0 chr2 170915383 170915423 -79772431 + MIR SINE MIR 173 212 -50 1683 191 3 7 chr2 170915507 170915789 -79772065 - AluJb SINE Alu -20 292 12 623 100 160 0 chr2 170916130 170916230 -79771624 + AluSc SINE Alu 182 297 -12 33 25 0 0 chr2 170917249 170917289 -79770565 + AT_rich Low_complexity Low_complexity 1 40 0 238 241 51 25 chr2 170917368 170917447 -79770407 - MIR SINE MIR -70 192 112 614 322 84 0 chr2 170917693 170917920 -79769934 + MIR SINE MIR 9 254 -8 327 255 21 78 chr2 170920972 170921113 -79766741 + MIR SINE MIR 73 205 -57 861 138 7 7 chr2 170921485 170921637 -79766217 - MLT1A1 LTR MaLR -213 152 1 204 250 0 50 chr2 170922063 170922123 -79765731 - MIR SINE MIR -92 170 114 185 276 219 41 chr2 170922090 170922213 -79765641 - MIR3 SINE MIR -61 147 3 * 990 172 98 23 chr2 170923685 170923900 -79763954 + MER46A DNA MER2_type 3 233 -3 1463 201 91 15 chr2 170924315 170924654 -79763200 - MLT1A1 LTR MaLR 0 365 1 200 300 0 0 chr2 170925209 170925259 -79762595 - L2 LINE L2 -10 3262 3213 180 292 45 56 chr2 170925369 170925458 -79762396 - MIR SINE MIR -131 131 44 251 150 0 0 chr2 170925765 170925805 -79762049 - MSTA LTR MaLR 0 428 389 457 165 0 34 chr2 170925806 170926062 -79761792 + AluJb SINE Alu 1 312 0 2192 106 46 30 chr2 170926069 170926464 -79761390 - MSTA LTR MaLR -27 401 1 921 228 72 17 chr2 170928419 170928656 -79759198 + MIR SINE MIR 2 251 -11 896 251 87 49 chr2 170928667 170929057 -79758797 + MLT1I LTR MaLR 5 409 0 1243 200 75 21 chr2 170929129 170929409 -79758445 + Charlie1a DNA MER1_type 8 302 -1153 1276 94 26 149 chr2 170929409 170929521 -79758333 + MER2 DNA MER2_type 2 126 -219 792 167 8 0 chr2 170929521 170929653 -79758201 + FLAM_C SINE Alu 1 133 0 1276 94 26 149 chr2 170929653 170929849 -79758005 + MER2 DNA MER2_type 126 272 -73 359 223 96 11 chr2 170929876 170929970 -79757884 + MER2 DNA MER2_type 242 343 -2 4037 184 111 17 chr2 170929972 170931029 -79756825 + Charlie1a DNA MER1_type 300 1455 0 2285 91 0 3 chr2 170931082 170931378 -79756476 + AluSx SINE Alu 12 306 -6 2160 87 30 7 chr2 170932395 170932694 -79755160 - AluSc SINE Alu -3 306 1 486 299 52 11 chr2 170932857 170933031 -79754823 + MIR SINE MIR 11 191 -71 192 40 0 0 chr2 170933165 170933190 -79754664 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 871 186 6 0 chr2 170934634 170934795 -79753059 - MER58B DNA MER1_type -11 330 169 25 51 0 0 chr2 170938071 170938110 -79749744 + AT_rich Low_complexity Low_complexity 1 39 0 2171 117 7 0 chr2 170939248 170939546 -79748308 + AluSx SINE Alu 1 300 -12 1017 300 55 57 chr2 170940479 170940969 -79746885 + L2 LINE L2 2823 3311 -2 316 203 0 14 chr2 170941497 170941571 -79746283 + L1PA16 LINE L1 6078 6150 -16 2130 166 11 6 chr2 170941733 170942095 -79745759 - MLT1A1 LTR MaLR -1 364 1 671 202 0 0 chr2 170942480 170942604 -79745250 + MLT1A1 LTR MaLR 150 273 -92 199 375 117 0 chr2 170942618 170942738 -79745116 + L2 LINE L2 3139 3272 0 1013 195 16 0 chr2 170946132 170946317 -79741537 + MER5A DNA MER1_type 1 188 -1 577 321 176 13 chr2 170946387 170946836 -79741018 - L3 LINE CR1 -857 720 199 240 346 47 9 chr2 170946892 170946999 -79740855 - L2 LINE L2 -8 3264 3154 797 186 64 79 chr2 170947592 170947737 -79740117 - MER33 DNA MER1_type -2261 324 178 2004 111 31 10 chr2 170947737 170948026 -79739828 - AluSx SINE Alu -17 295 1 797 186 64 79 chr2 170948026 170948208 -79739646 - MER33 DNA MER1_type -2407 178 2 583 270 155 9 chr2 170948316 170948542 -79739312 + MIR SINE MIR 2 260 -2 766 181 124 34 chr2 170948723 170948900 -79738954 + Tigger3(Golem) DNA MER2_type 1 193 -2836 2122 176 26 2 chr2 170948900 170949327 -79738527 - L1MB7 LINE L1 -174 6010 5574 222 62 0 0 chr2 170949334 170949366 -79738488 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 1768 179 0 4 chr2 170949436 170949716 -79738138 - AluJo SINE Alu -33 279 1 1356 193 41 56 chr2 170949716 170950328 -79737526 - L1MB7 LINE L1 -589 5585 4904 516 365 23 0 chr2 170951001 170951220 -79736634 - L3 LINE CR1 -105 1472 1249 4610 135 64 62 chr2 170951800 170953259 -79734595 - pTR5 LTR ERV1 0 2438 66 252 292 118 21 chr2 170954352 170954496 -79733358 + MIR SINE MIR 41 198 -64 2347 84 0 3 chr2 170955064 170955361 -79732493 + AluSc SINE Alu 1 296 -13 1038 229 32 5 chr2 170955831 170956049 -79731805 + MER58A DNA MER1_type 1 224 0 1918 88 12 0 chr2 170956184 170956424 -79731430 - AluSx SINE Alu -10 302 60 2324 88 0 13 chr2 170956520 170956827 -79731027 + AluSx SINE Alu 1 303 -9 210 235 20 0 chr2 170957683 170957734 -79730120 - L2 LINE L2 -21 3251 3200 182 180 66 66 chr2 170957750 170957811 -79730043 + L2 LINE L2 3252 3312 -1 21 0 0 0 chr2 170958716 170958737 -79729117 + AT_rich Low_complexity Low_complexity 1 21 0 183 254 68 17 chr2 170961712 170961771 -79726083 - L2 LINE L2 -1311 2003 1942 257 188 25 163 chr2 170962070 170962230 -79725624 - LTR16B LTR ERVL -318 146 9 201 154 0 0 chr2 170962336 170962375 -79725479 + (CA)n Simple_repeat Simple_repeat 2 40 0 1920 156 3 28 chr2 170963387 170963707 -79724147 + AluJo SINE Alu 1 312 0 862 193 0 56 chr2 170963720 170963881 -79723973 + AluJo SINE Alu 1 152 -160 1318 142 42 54 chr2 170964129 170964390 -79723464 - AluJo SINE Alu -21 291 34 305 161 32 89 chr2 170965775 170965899 -79721955 + L1MC5 LINE L1 7795 7911 -50 1895 104 7 78 chr2 170966694 170967003 -79720851 - AluSx SINE Alu -23 289 3 205 340 113 0 chr2 170967057 170967163 -79720691 - L2 LINE L2 -236 3036 2919 211 169 51 17 chr2 170967405 170967464 -79720390 + T-rich Low_complexity Low_complexity 4 64 0 1698 88 180 0 chr2 170967547 170967797 -79720057 - AluSx SINE Alu -17 295 1 383 356 68 40 chr2 170968161 170968439 -79719415 - L2 LINE L2 -1 3271 2986 246 344 41 49 chr2 170968636 170968880 -79718974 - L2 LINE L2 -684 2630 2389 * 399 280 89 36 chr2 170968873 170969041 -79718813 + MIR SINE MIR 11 187 -75 254 286 174 0 chr2 170969068 170969166 -79718688 - L2 LINE L2 -929 2385 2271 198 0 0 0 chr2 170969170 170969192 -79718662 + (A)n Simple_repeat Simple_repeat 1 22 0 1308 93 192 0 chr2 170969221 170969414 -79718440 + MER30 DNA MER1_type 1 230 0 391 347 84 18 chr2 170970453 170970678 -79717176 - L2 LINE L2 -351 2963 2724 645 179 0 0 chr2 170970945 170971068 -79716786 + (TATG)n Simple_repeat Simple_repeat 2 124 0 1273 131 11 5 chr2 170971150 170971341 -79716513 + AluJb SINE Alu 1 192 -120 21 0 0 0 chr2 170971652 170971673 -79716181 + AT_rich Low_complexity Low_complexity 1 21 0 2471 60 0 28 chr2 170971783 170972102 -79715752 - AluY SINE Alu -1 310 1 867 174 47 35 chr2 170972661 170972833 -79715021 + MER5B DNA MER1_type 2 175 -3 2458 68 0 0 chr2 170973044 170973337 -79714517 - AluY SINE Alu -18 293 1 846 290 63 17 chr2 170973391 170973691 -79714163 - MER115 DNA AcHobo -9 684 371 307 284 168 30 chr2 170973792 170973989 -79713865 - MER115 DNA AcHobo -442 251 28 414 0 0 0 chr2 170974572 170974618 -79713236 + (TA)n Simple_repeat Simple_repeat 1 46 0 269 255 168 51 chr2 170974672 170974868 -79712986 - L1ME4a LINE L1 -2 6119 5901 1262 161 0 33 chr2 170974877 170975088 -79712766 + AluJo SINE Alu 85 288 -24 268 258 72 10 chr2 170975106 170975203 -79712651 - L1ME4a LINE L1 -236 5885 5783 294 288 71 38 chr2 170975215 170975427 -79712427 - L1ME4a LINE L1 -391 5730 5512 222 128 0 0 chr2 170975617 170975656 -79712198 + (CA)n Simple_repeat Simple_repeat 2 40 0 233 213 0 50 chr2 170975730 170975810 -79712044 - L1ME4a LINE L1 -691 5430 5355 28 0 0 0 chr2 170976172 170976200 -79711654 + AT_rich Low_complexity Low_complexity 1 28 0 453 191 12 24 chr2 170977414 170977498 -79710356 - AluJo SINE Alu -143 169 87 2231 149 61 25 chr2 170977527 170977971 -79709883 - MER66B LTR ERV1 0 486 27 1128 274 102 15 chr2 170978124 170978654 -79709200 - L1ME4a LINE L1 -9 6112 5537 667 211 49 8 chr2 170979953 170980076 -79707778 + FLAM_A SINE Alu 1 128 -5 351 0 0 0 chr2 170980076 170980115 -79707739 + (TG)n Simple_repeat Simple_repeat 2 40 0 463 314 59 7 chr2 170980857 170981010 -79706844 - MIR3 SINE MIR -18 190 30 1612 148 23 59 chr2 170982562 170982866 -79704988 - AluJo SINE Alu -19 293 1 549 231 30 130 chr2 170984546 170984815 -79703039 + MIR SINE MIR 21 262 0 285 345 0 0 chr2 170984832 170984916 -79702938 + MIR SINE MIR 161 244 -18 937 128 0 0 chr2 170985396 170985521 -79702333 + FLAM_C SINE Alu 1 125 -18 690 185 71 62 chr2 170987747 170987926 -79699928 - L1ME3 LINE L1 0 6162 5979 3171 85 52 5 chr2 170987926 170988350 -79699504 - MLT2A1 LTR ERVL 0 444 1 690 185 71 62 chr2 170988350 170988381 -79699473 - L1ME3 LINE L1 -183 5979 5950 2497 18 0 7 chr2 170988531 170988853 -79699001 - AluY SINE Alu 0 320 1 30 0 0 0 chr2 170989672 170989702 -79698152 + AT_rich Low_complexity Low_complexity 1 30 0 2115 92 4 0 chr2 170989705 170989976 -79697878 + L1PA8 LINE L1 5895 6166 -6 259 291 25 0 chr2 170990144 170990223 -79697631 - L1M4 LINE L1 -2005 4141 4061 1716 158 13 23 chr2 170990668 170990971 -79696883 - AluJo SINE Alu -12 300 1 2041 122 0 62 chr2 170991037 170991358 -79696496 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 170991418 170991439 -79696415 + AT_rich Low_complexity Low_complexity 1 21 0 2430 80 0 0 chr2 170991936 170992236 -79695618 - AluY SINE Alu -9 302 3 2709 162 113 4 chr2 170992645 170993157 -79694697 + L1MB3 LINE L1 5615 6182 -1 1929 120 14 11 chr2 170996011 170996329 -79691525 - AluSp SINE Alu 0 319 1 2358 106 3 0 chr2 170996420 170996731 -79691123 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 171003215 171003238 -79684616 + AT_rich Low_complexity Low_complexity 1 23 0 986 174 84 42 chr2 171003723 171003936 -79683918 - MSTD LTR MaLR 0 396 175 40 16 0 32 chr2 171004360 171004399 -79683455 + AT_rich Low_complexity Low_complexity 1 39 -21 1539 193 7 7 chr2 171004399 171004679 -79683175 - AluJo SINE Alu -32 280 1 40 16 0 32 chr2 171004679 171004701 -79683153 + AT_rich Low_complexity Low_complexity 39 60 0 551 241 43 32 chr2 171004708 171004895 -79682959 - LTR33 LTR ERVL -4 517 329 257 286 111 16 chr2 171004948 171005074 -79682780 - LTR33 LTR ERVL -327 194 57 266 300 14 0 chr2 171005118 171005188 -79682666 + L2 LINE L2 3202 3272 0 464 287 17 0 chr2 171005674 171005789 -79682065 - L2 LINE L2 0 3313 3197 6043 125 20 16 chr2 171005799 171006758 -79681096 + L1MC1 LINE L1 5371 6333 0 2031 149 44 54 chr2 171006771 171007161 -79680693 - MLT1B LTR MaLR -2 388 3 951 243 99 48 chr2 171007206 171007639 -79680215 + LTR1B LTR ERV1 44 498 -328 583 290 53 42 chr2 171007859 171008216 -79679638 - L2 LINE L2 -245 3068 2710 2695 213 49 16 chr2 171008906 171009183 -79678671 + MER82 DNA MER2_type 1 267 -386 4252 116 52 51 chr2 171009183 171009909 -79677945 - LTR8A LTR ERV1 0 727 1 2695 213 49 16 chr2 171009909 171010183 -79677671 + MER82 DNA MER2_type 267 571 -82 268 196 0 0 chr2 171010183 171010216 -79677638 - MLT2D LTR ERVL 0 414 382 4244 140 33 10 chr2 171010216 171010911 -79676943 + MER50 LTR ERV1 1 711 -23 369 0 0 0 chr2 171010927 171010968 -79676886 + (TG)n Simple_repeat Simple_repeat 1 41 0 1865 177 58 94 chr2 171010997 171011478 -79676376 - MLT2B1 LTR ERVL -56 464 1 458 202 0 0 chr2 171011479 171011563 -79676291 + MER82 DNA MER2_type 564 647 -6 1323 153 112 84 chr2 171011582 171011729 -79676125 - MER63B DNA MER1_type -626 436 295 1932 142 3 27 chr2 171011729 171012025 -79675829 + AluJb SINE Alu 1 289 -23 1323 153 112 84 chr2 171012025 171012262 -79675592 - MER63B DNA MER1_type -767 295 37 195 42 0 0 chr2 171012262 171012286 -79675568 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 1323 153 112 84 chr2 171012286 171012318 -79675536 - MER63B DNA MER1_type -1025 37 7 2314 100 0 13 chr2 171013548 171013849 -79674005 - AluSx SINE Alu -15 297 1 21 0 0 0 chr2 171013859 171013880 -79673974 + AT_rich Low_complexity Low_complexity 1 21 0 3764 159 5 23 chr2 171013976 171014622 -79673232 + MER50 LTR ERV1 12 645 -89 1375 98 0 35 chr2 171014622 171014825 -79673029 - AluSq SINE Alu -117 196 1 435 174 0 0 chr2 171014826 171014895 -79672959 + MER50 LTR ERV1 643 711 -23 478 303 73 84 chr2 171015031 171015470 -79672384 + L2 LINE L2 2835 3268 -4 261 311 56 0 chr2 171015649 171015739 -79672115 - MIR SINE MIR -122 140 46 182 333 39 20 chr2 171015762 171015864 -79671990 - L2 LINE L2 -1168 2146 2043 942 170 6 12 chr2 171015889 171016054 -79671800 + FRAM SINE Alu 1 163 -13 1851 214 82 34 chr2 171016452 171016681 -79671173 + L1MC4 LINE L1 6458 6675 -1367 446 33 17 0 chr2 171016681 171016741 -79671113 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 1851 214 82 34 chr2 171016741 171017038 -79670816 + L1MC4 LINE L1 6675 7009 -1033 2516 120 46 6 chr2 171017043 171017393 -79670461 - THE1B LTR MaLR 0 364 1 246 149 21 21 chr2 171017408 171017455 -79670399 - MLT1G LTR MaLR -474 116 70 2252 223 77 22 chr2 171018016 171018717 -79669137 + L1MC4 LINE L1 7004 7903 -139 7711 37 10 0 chr2 171018792 171019957 -79667897 - L1PA4 LINE L1 -3 6152 4977 1656 126 7 100 chr2 171020244 171020554 -79667300 - AluSq SINE Alu -10 303 23 226 366 49 14 chr2 171020684 171020826 -79667028 - MIR SINE MIR -111 151 5 265 327 161 31 chr2 171020871 171021094 -79666760 + L2 LINE L2 2443 2694 -620 1942 160 0 13 chr2 171021121 171021428 -79666426 + AluJb SINE Alu 1 303 -9 181 79 0 53 chr2 171021979 171022017 -79665837 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 2436 77 0 0 chr2 171022150 171022447 -79665407 - AluY SINE Alu -14 297 1 733 164 18 0 chr2 171022578 171022688 -79665166 - FLAM_A SINE Alu -30 112 1 23 0 0 0 chr2 171023749 171023772 -79664082 + AT_rich Low_complexity Low_complexity 1 23 0 1920 161 0 37 chr2 171024869 171025193 -79662661 - AluJb SINE Alu 0 312 1 188 431 32 8 chr2 171025280 171025403 -79662451 - L2 LINE L2 -229 3043 2918 22 0 0 0 chr2 171025468 171025490 -79662364 + AT_rich Low_complexity Low_complexity 1 22 0 781 186 0 0 chr2 171025493 171025611 -79662243 + FLAM_C SINE Alu 2 119 -24 294 236 0 45 chr2 171025613 171025702 -79662152 + MIR SINE MIR 114 198 -64 1173 157 15 10 chr2 171025702 171025906 -79661948 + MER2 DNA MER2_type 2 206 -139 26 30 0 0 chr2 171025908 171025941 -79661913 + AT_rich Low_complexity Low_complexity 1 33 0 253 250 33 0 chr2 171025987 171026047 -79661807 + MIR SINE MIR 201 262 0 243 88 0 0 chr2 171026610 171026644 -79661210 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 2565 155 16 20 chr2 171026654 171027093 -79660761 + LTR23 LTR ERV1 1 437 0 1090 262 116 28 chr2 171027637 171028130 -79659724 + MLT1H LTR MaLR 1 536 -13 801 152 0 0 chr2 171028724 171028836 -79659018 - FLAM_C SINE Alu -26 117 6 1011 170 58 67 chr2 171029095 171029319 -79658535 - AluJo SINE Alu -90 222 1 202 305 17 0 chr2 171029724 171029783 -79658071 + L2 LINE L2 443 502 -2812 1297 192 7 22 chr2 171029796 171030072 -79657782 - MER74B LTR ERVL -293 329 58 984 207 144 39 chr2 171032521 171032959 -79654895 + Charlie4a DNA MER1_type 22 507 -1 223 202 0 149 chr2 171033735 171033849 -79654005 + MIR3 SINE MIR 97 193 -15 196 178 44 22 chr2 171033963 171034008 -79653846 + L2 LINE L2 3216 3261 -11 214 263 288 0 chr2 171034821 171034901 -79652953 + MIR3 SINE MIR 54 156 -52 255 61 0 0 chr2 171035046 171035079 -79652775 + (CA)n Simple_repeat Simple_repeat 2 34 0 420 311 51 17 chr2 171036421 171036717 -79651137 + L1M4 LINE L1 4406 4711 -1435 571 244 42 47 chr2 171036851 171037044 -79650810 - MLT1J LTR MaLR 0 511 320 278 316 43 17 chr2 171037136 171037253 -79650601 - MLT1J LTR MaLR -323 188 69 313 152 30 45 chr2 171037348 171037414 -79650440 + MER103 DNA DNA 13 77 -89 83 0 0 0 chr2 171037504 171037587 -79650267 + AT_rich Low_complexity Low_complexity 1 83 0 554 282 139 20 chr2 171037681 171037975 -79649879 + MER102a DNA MER1_type 2 330 0 186 59 29 59 chr2 171038312 171038346 -79649508 + L2 LINE L2 3223 3255 -17 195 352 0 0 chr2 171039674 171039728 -79648126 + L2 LINE L2 3041 3094 -178 718 249 86 46 chr2 171040206 171040555 -79647299 - MER34B LTR ERV1 0 565 203 200 280 0 0 chr2 171042521 171042571 -79645283 + L2 LINE L2 3223 3272 0 788 155 9 0 chr2 171042581 171042697 -79645157 + FLAM_C SINE Alu 2 118 -25 434 300 68 23 chr2 171043452 171043672 -79644182 + L2 LINE L2 2160 2389 -925 439 342 58 32 chr2 171043863 171044053 -79643801 + MER91A DNA MER1_type 2 196 0 395 320 106 78 chr2 171044321 171044652 -79643202 + L2 LINE L2 2932 3271 -1 199 358 24 8 chr2 171044822 171044945 -79642909 - MIR SINE MIR -12 250 126 1388 205 13 23 chr2 171045945 171046252 -79641602 - AluJo SINE Alu -8 304 1 23 0 0 0 chr2 171046452 171046475 -79641379 + AT_rich Low_complexity Low_complexity 1 23 0 308 67 0 0 chr2 171046647 171046692 -79641162 - L1MA3 LINE L1 0 6305 6261 692 267 24 44 chr2 171047958 171048209 -79639645 + MIR SINE MIR 14 259 -3 845 260 178 27 chr2 171049234 171049677 -79638177 - L2 LINE L2 0 3313 2804 24 32 0 0 chr2 171050316 171050347 -79637507 + AT_rich Low_complexity Low_complexity 1 31 0 2372 94 0 0 chr2 171050805 171051112 -79636742 - AluY SINE Alu -4 307 1 2386 148 83 16 chr2 171051115 171051549 -79636305 - MLT1C LTR MaLR 0 467 5 2141 131 7 0 chr2 171051591 171051897 -79635957 + AluSq SINE Alu 1 308 -5 2235 115 0 0 chr2 171052100 171052395 -79635459 - AluSx SINE Alu -17 295 1 1487 150 87 19 chr2 171052550 171052854 -79635000 - AluJb SINE Alu 0 323 2 589 258 74 0 chr2 171052945 171053162 -79634692 - MIR SINE MIR -12 250 18 346 309 51 12 chr2 171053217 171053390 -79634464 + MIR SINE MIR 33 218 -44 622 308 128 0 chr2 171053758 171053985 -79633869 + MIR SINE MIR 2 257 -5 272 200 14 0 chr2 171054208 171054278 -79633576 + CT-rich Low_complexity Low_complexity 2 72 0 907 253 43 25 chr2 171054521 171054798 -79633056 - L1ME1 LINE L1 -5 6161 5880 1481 165 23 27 chr2 171055390 171055651 -79632203 - AluJo SINE Alu -32 280 21 33 25 0 0 chr2 171056407 171056447 -79631407 + AT_rich Low_complexity Low_complexity 1 40 0 856 256 127 16 chr2 171056448 171056827 -79631027 + L1ME4a LINE L1 5658 6078 -43 257 125 0 21 chr2 171057047 171057095 -79630759 + (TTCC)n Simple_repeat Simple_repeat 2 48 0 2091 127 6 16 chr2 171057101 171057417 -79630437 - AluSq SINE Alu 0 313 1 2070 152 20 6 chr2 171058855 171059211 -79628643 - MLT1A1 LTR MaLR 0 365 5 755 260 92 9 chr2 171059525 171059752 -79628102 - MIR SINE MIR -15 247 2 819 150 0 57 chr2 171060564 171060704 -79627150 - FLAM_C SINE Alu -11 132 1 23 54 0 0 chr2 171060859 171060896 -79626958 + AT_rich Low_complexity Low_complexity 1 37 0 407 68 17 0 chr2 171062283 171062342 -79625512 + (CA)n Simple_repeat Simple_repeat 1 60 0 700 187 0 30 chr2 171062350 171062484 -79625370 - FLAM_A SINE Alu -2 131 2 318 119 87 48 chr2 171062615 171062741 -79625113 - Charlie7 DNA MER1_type -65 2547 2417 * 1103 284 72 55 chr2 171062734 171062870 -79624984 - Charlie7 DNA MER1_type -1891 721 589 2009 137 0 13 chr2 171062870 171063170 -79624684 - AluSx SINE Alu -16 296 1 1103 284 72 55 chr2 171063170 171063738 -79624116 - Charlie7 DNA MER1_type -2023 589 5 2262 52 7 3 chr2 171065478 171065765 -79622089 + AluY SINE Alu 13 300 -11 198 103 0 0 chr2 171066655 171066684 -79621170 + (T)n Simple_repeat Simple_repeat 1 29 0 420 301 187 5 chr2 171067590 171067637 -79620217 + L1ME4a LINE L1 5563 5600 -521 940 177 36 10 chr2 171067637 171067829 -79620025 - MER105 DNA DNA -4 200 4 420 301 187 5 chr2 171067829 171068177 -79619677 + L1ME4a LINE L1 5600 6030 -91 2127 158 22 2 chr2 171069440 171069844 -79618010 + L1MB3 LINE L1 5769 6180 -3 2225 114 0 37 chr2 171070212 171070536 -79617318 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 171070546 171070567 -79617287 + AT_rich Low_complexity Low_complexity 1 21 0 3521 158 6 23 chr2 171070663 171071316 -79616538 + MER50 LTR ERV1 12 653 -81 1399 109 0 5 chr2 171071319 171071511 -79616343 - AluSq SINE Alu -122 191 1 404 174 0 0 chr2 171071512 171071581 -79616273 + MER50 LTR ERV1 643 711 -23 181 336 0 80 chr2 171071585 171071698 -79616156 - L2 LINE L2 -228 3044 2941 493 303 73 84 chr2 171071717 171072156 -79615698 + L2 LINE L2 2835 3268 -4 180 268 85 59 chr2 171072147 171072300 -79615554 - L2 LINE L2 -886 2428 2272 * 263 311 56 0 chr2 171072335 171072425 -79615429 - MIR SINE MIR -122 140 46 189 333 39 20 chr2 171072448 171072550 -79615304 - L2 LINE L2 -1168 2146 2043 958 170 6 12 chr2 171072575 171072740 -79615114 + FRAM SINE Alu 1 163 -13 1629 216 82 34 chr2 171073138 171073367 -79614487 + L1MC4 LINE L1 6458 6675 -1367 410 36 18 0 chr2 171073367 171073423 -79614431 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 1629 216 82 34 chr2 171073423 171073720 -79614134 + L1MC4 LINE L1 6675 7009 -1033 2328 118 49 6 chr2 171073725 171074074 -79613780 - THE1B LTR MaLR 0 364 1 226 149 21 21 chr2 171074089 171074136 -79613718 - MLT1G LTR MaLR -474 116 70 1992 230 69 19 chr2 171074699 171075379 -79612475 + L1MC4 LINE L1 7006 7880 -162 7213 37 10 0 chr2 171075473 171076638 -79611216 - L1PA4 LINE L1 -3 6152 4977 1664 135 28 95 chr2 171076925 171077250 -79610604 - AluSq SINE Alu -10 303 1 240 359 49 14 chr2 171077365 171077507 -79610347 - MIR SINE MIR -111 151 5 285 335 149 29 chr2 171077552 171077794 -79610060 + L2 LINE L2 2443 2713 -601 1962 160 0 13 chr2 171077802 171078109 -79609745 + AluJb SINE Alu 1 303 -9 181 79 0 53 chr2 171078660 171078698 -79609156 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 2413 81 0 0 chr2 171078831 171079128 -79608726 - AluY SINE Alu -14 297 1 694 164 18 0 chr2 171079259 171079369 -79608485 - FLAM_A SINE Alu -30 112 1 23 0 0 0 chr2 171080430 171080453 -79607401 + AT_rich Low_complexity Low_complexity 1 23 0 1950 161 0 37 chr2 171081551 171081875 -79605979 - AluJb SINE Alu 0 312 1 207 423 32 8 chr2 171081962 171082085 -79605769 - L2 LINE L2 -229 3043 2918 21 0 0 0 chr2 171082150 171082171 -79605683 + AT_rich Low_complexity Low_complexity 1 21 0 738 186 0 0 chr2 171082174 171082292 -79605562 + FLAM_C SINE Alu 2 119 -24 311 236 0 45 chr2 171082294 171082383 -79605471 + MIR SINE MIR 114 198 -64 1092 153 11 5 chr2 171082383 171082573 -79605281 + MER2 DNA MER2_type 2 192 -153 205 95 0 71 chr2 171082582 171082624 -79605230 + (TTTTTA)n Simple_repeat Simple_repeat 1 39 0 254 250 33 0 chr2 171082668 171082728 -79605126 + MIR SINE MIR 201 262 0 263 150 17 0 chr2 171083275 171083335 -79604519 + (TAGA)n Simple_repeat Simple_repeat 3 63 0 2345 150 16 20 chr2 171083339 171083778 -79604076 + LTR23 LTR ERV1 1 437 0 915 278 110 22 chr2 171084322 171084812 -79603042 + MLT1H LTR MaLR 1 533 -16 727 188 0 0 chr2 171085408 171085525 -79602329 - FLAM_C SINE Alu -26 117 1 2343 109 0 3 chr2 171085899 171086211 -79601643 + AluSx SINE Alu 1 311 -1 261 235 92 0 chr2 171086656 171086754 -79601100 + L1ME3A LINE L1 5844 5950 -220 1584 198 7 0 chr2 171086756 171087034 -79600820 + AluJb SINE Alu 1 280 -32 2348 71 0 0 chr2 171087035 171087317 -79600537 + AluY SINE Alu 3 284 -27 311 169 0 26 chr2 171087457 171087534 -79600320 + (TATATG)n Simple_repeat Simple_repeat 2 76 0 804 151 0 0 chr2 171087553 171087672 -79600182 - AluJb SINE Alu -179 133 15 309 51 0 0 chr2 171087678 171087717 -79600137 + (TG)n Simple_repeat Simple_repeat 2 40 0 * 1194 107 0 0 chr2 171087716 171087893 -79599961 + (TA)n Simple_repeat Simple_repeat 2 178 0 25623 28 9 0 chr2 171088554 171092561 -79595293 + L1PA4 LINE L1 2111 6153 -2 1825 156 31 3 chr2 171093173 171093461 -79594393 - AluSx SINE Alu -16 296 1 2730 165 51 4 chr2 171095041 171095748 -79592106 + L1MB4 LINE L1 5096 5828 -352 782 166 25 45 chr2 171095768 171095925 -79591929 - MER68 LTR ERV1 -36 526 373 * 1507 177 40 4 chr2 171095917 171096194 -79591660 + MER68 LTR ERV1 276 562 0 418 176 11 44 chr2 171096346 171096436 -79591418 - MER44D DNA MER2_type 0 705 619 452 195 0 0 chr2 171096436 171096523 -79591331 - Tigger5 DNA MER2_type 0 2323 2237 317 176 0 0 chr2 171096535 171096586 -79591268 - Tigger5 DNA MER2_type -2270 53 3 1252 114 13 42 chr2 171096587 171096823 -79591031 - MER44D DNA MER2_type -84 525 27 280 302 22 7 chr2 171096874 171097013 -79590841 + L1ME LINE L1 5731 5871 -250 229 250 36 0 chr2 171098060 171098116 -79589738 + L2 LINE L2 3251 3308 -5 1421 170 137 7 chr2 171098922 171099193 -79588661 - AluJo SINE Alu -6 306 1 307 306 250 21 chr2 171099395 171099863 -79587991 + L1MB7 LINE L1 3697 4271 -1875 13980 115 56 5 chr2 171100033 171102327 -79585527 - Tigger1 DNA MER2_type -2 2416 6 218 265 46 133 chr2 171103440 171103519 -79584335 - MIR SINE MIR -122 140 77 1994 112 11 0 chr2 171103519 171103824 -79584030 + AluSc SINE Alu 1 308 0 218 265 46 133 chr2 171103824 171103894 -79583960 - MIR SINE MIR -185 77 3 255 275 99 7 chr2 171103937 171104079 -79583775 + L1MB7 LINE L1 5298 5452 -669 484 275 69 16 chr2 171104121 171104368 -79583486 + L1MB7 LINE L1 5541 5800 -321 244 248 109 30 chr2 171104769 171104870 -79582984 + MIR SINE MIR 124 232 -30 2335 106 0 0 chr2 171104965 171105267 -79582587 - AluSc SINE Alu -7 302 1 453 213 221 0 chr2 171105389 171105511 -79582343 + MIR SINE MIR 2 150 -112 378 232 125 18 chr2 171105608 171105720 -79582134 + L2 LINE L2 3190 3313 0 467 266 51 62 chr2 171105969 171106146 -79581708 + MIR SINE MIR 86 260 -2 472 297 153 66 chr2 171106181 171106889 -79580965 + L2 LINE L2 2199 2967 -347 793 208 98 11 chr2 171106955 171107138 -79580716 + MIR SINE MIR 37 235 -27 409 117 39 0 chr2 171107667 171107744 -79580110 + (CATATA)n Simple_repeat Simple_repeat 1 80 0 185 57 171 0 chr2 171108645 171108680 -79579174 + MIR SINE MIR 106 146 -62 233 277 0 31 chr2 171110719 171110784 -79577070 - L2 LINE L2 -1 3312 3250 22 0 0 0 chr2 171111440 171111462 -79576392 + AT_rich Low_complexity Low_complexity 1 22 0 1767 160 29 14 chr2 171111481 171111831 -79576023 - MSTA LTR MaLR 0 428 74 262 284 15 3 chr2 171111872 171112012 -79575842 + L1M4b LINE L1 31 474 -6381 * 866 278 49 7 chr2 171112007 171112313 -79575541 + L1MB7 LINE L1 5857 6175 -9 1161 176 55 0 chr2 171112419 171112657 -79575197 - L1MB3 LINE L1 -3 6180 5930 309 347 20 80 chr2 171112775 171113026 -79574828 + L2 LINE L2 2958 3193 -79 689 226 50 22 chr2 171113058 171113239 -79574615 + MER5A DNA MER1_type 4 189 0 241 296 15 34 chr2 171114688 171114810 -79573044 + GA-rich Low_complexity Low_complexity 4 199 0 373 327 130 0 chr2 171115193 171115355 -79572499 - MER5A DNA MER1_type 0 189 7 268 244 55 24 chr2 171115815 171115942 -79571912 - L1MC4a LINE L1 -1630 6178 6048 52 17 0 0 chr2 171115950 171116009 -79571845 + AT_rich Low_complexity Low_complexity 1 59 0 350 150 60 0 chr2 171116009 171116176 -79571678 + (TA)n Simple_repeat Simple_repeat 2 178 0 45 91 0 7 chr2 171116176 171116313 -79571541 + AT_rich Low_complexity Low_complexity 1 138 -15 625 214 8 0 chr2 171116313 171116430 -79571424 - FLAM_C SINE Alu -15 118 1 45 91 0 7 chr2 171116430 171116446 -79571408 + AT_rich Low_complexity Low_complexity 138 153 0 418 266 11 0 chr2 171116495 171116672 -79571182 + (TA)n Simple_repeat Simple_repeat 1 179 0 248 304 0 14 chr2 171116853 171116922 -79570932 - L2 LINE L2 0 3272 3205 2215 81 7 20 chr2 171117048 171117344 -79570510 - AluSx SINE Alu -20 292 1 180 313 188 0 chr2 171117409 171117505 -79570349 - L2 LINE L2 -30 3242 3129 21 0 0 0 chr2 171117520 171117541 -79570313 + AT_rich Low_complexity Low_complexity 1 21 0 2060 142 66 3 chr2 171117555 171117921 -79569933 + MLT1B LTR MaLR 2 390 0 406 329 44 13 chr2 171118491 171118649 -79569205 - MER5B DNA MER1_type 0 178 16 2380 99 3 0 chr2 171120373 171120677 -79567177 - AluSp SINE Alu -8 305 1 24 32 0 0 chr2 171121833 171121864 -79565990 + AT_rich Low_complexity Low_complexity 1 31 0 251 184 126 78 chr2 171122276 171122379 -79565475 - MER103 DNA DNA -24 142 35 647 50 0 0 chr2 171122720 171122800 -79565054 + MADE1 DNA Mariner 1 80 0 227 119 0 51 chr2 171124717 171124776 -79563078 + (A)n Simple_repeat Simple_repeat 1 56 0 191 179 13 128 chr2 171125175 171125253 -79562601 - MIR3 SINE MIR -2 206 138 614 274 58 23 chr2 171126820 171127079 -79560775 + Charlie8 DNA MER1_type 7 274 -2143 364 273 132 0 chr2 171127159 171127280 -79560574 - MIR3 SINE MIR -33 175 39 1451 166 10 52 chr2 171127328 171127636 -79560218 - AluJo SINE Alu -5 307 13 920 169 28 52 chr2 171129931 171130058 -79557796 + MER3 DNA MER1_type 1 123 -86 2386 64 3 3 chr2 171130058 171130353 -79557501 - AluY SINE Alu -16 295 1 920 169 28 52 chr2 171130353 171130438 -79557416 + MER3 DNA MER1_type 123 208 -1 509 223 121 0 chr2 171130572 171130738 -79557116 - L1MEc LINE L1 -5982 414 229 207 0 0 0 chr2 171131989 171132012 -79555842 + (CCCCG)n Simple_repeat Simple_repeat 2 24 0 312 27 0 0 chr2 171132189 171132226 -79555628 + (TG)n Simple_repeat Simple_repeat 2 38 0 255 359 42 12 chr2 171132405 171132572 -79555282 + MIR3 SINE MIR 30 201 -7 186 43 0 0 chr2 171134103 171134126 -79553728 + (CAA)n Simple_repeat Simple_repeat 2 24 0 471 241 128 61 chr2 171134149 171134477 -79553377 - MLT1J LTR MaLR -51 460 111 1080 162 89 60 chr2 171136448 171136763 -79551091 + MER33 DNA MER1_type 1 324 0 266 287 61 52 chr2 171136856 171136971 -79550883 - L2 LINE L2 -8 3305 3190 1837 277 59 60 chr2 171137602 171138500 -79549354 - HAL1 LINE L1 -131 2376 1479 1719 157 43 20 chr2 171138500 171138805 -79549049 - AluJb SINE Alu 0 312 1 1837 277 59 60 chr2 171138805 171139212 -79548642 - HAL1 LINE L1 -1028 1479 1073 624 283 38 40 chr2 171140089 171140460 -79547394 - HAL1 LINE L1 -1418 1089 720 1439 45 50 15 chr2 171140484 171140685 -79547169 - AluY SINE Alu -1 310 103 957 324 111 27 chr2 171140808 171141080 -79546774 - HAL1 LINE L1 -1542 965 717 2435 47 37 3 chr2 171141080 171141378 -79546476 - AluY SINE Alu -3 308 1 957 324 111 27 chr2 171141378 171141986 -79545868 - HAL1 LINE L1 -1790 717 11 194 368 105 0 chr2 171142403 171142498 -79545356 - L2 LINE L2 -10 3303 3199 352 313 132 25 chr2 171144443 171144671 -79543183 + MIR SINE MIR 12 262 0 * 401 311 123 48 chr2 171144660 171144888 -79542966 - MIR SINE MIR -5 257 13 226 221 15 59 chr2 171145061 171145129 -79542725 + L2 LINE L2 3208 3272 0 435 282 70 14 chr2 171145637 171145779 -79542075 - MIR SINE MIR -110 152 3 2215 142 23 0 chr2 171145963 171146316 -79541538 - MER46B DNA MER2_type 0 236 1 228 286 95 56 chr2 171147084 171147210 -79540644 - L2 LINE L2 0 3272 3142 230 267 51 111 chr2 171147443 171147660 -79540194 + L2 LINE L2 3103 3306 -7 394 241 139 11 chr2 171148343 171148530 -79539324 + HAL1 LINE L1 1601 1811 -696 400 263 119 51 chr2 171149015 171149327 -79538527 + HAL1 LINE L1 2175 2507 0 2778 50 3 14 chr2 171151237 171151598 -79536256 - L1PA7 LINE L1 -3 6151 5795 259 326 0 22 chr2 171151816 171151905 -79535949 + MIR SINE MIR 31 117 -91 2610 55 0 0 chr2 171152057 171152364 -79535490 + AluY SINE Alu 1 307 -4 202 156 22 22 chr2 171152625 171152670 -79535184 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 2013 112 11 28 chr2 171152979 171153285 -79534569 - AluSx SINE Alu 0 301 1 29 94 0 0 chr2 171153312 171153397 -79534457 + AT_rich Low_complexity Low_complexity 1 85 0 475 268 33 26 chr2 171153915 171154068 -79533786 + MLT1H LTR MaLR 1 154 -395 351 199 176 29 chr2 171154220 171154356 -79533498 + MLT1H LTR MaLR 390 545 -4 3005 135 29 35 chr2 171155758 171156112 -79531742 - L1MB4 LINE L1 -7 6173 5822 1885 184 7 0 chr2 171156112 171156422 -79531432 - AluJb SINE Alu 0 312 1 3005 135 29 35 chr2 171156422 171156645 -79531209 - L1MB4 LINE L1 -358 5822 5599 2615 173 48 8 chr2 171157466 171157941 -79529913 + L1MB3 LINE L1 5683 6176 -7 417 259 79 72 chr2 171158128 171158418 -79529436 - L1MC4a LINE L1 -1849 5959 5668 836 339 111 41 chr2 171158545 171159214 -79528640 + L2 LINE L2 1783 2404 -910 1816 126 0 0 chr2 171159214 171159460 -79528394 - AluSx SINE Alu -66 246 1 836 339 111 41 chr2 171159460 171159710 -79528144 + L2 LINE L2 2404 2778 -536 2190 105 14 3 chr2 171159710 171160006 -79527848 - AluSq SINE Alu -14 299 1 836 339 111 41 chr2 171160006 171160071 -79527783 + L2 LINE L2 2778 2837 -477 329 328 169 16 chr2 171160291 171160480 -79527374 + L2 LINE L2 3055 3272 0 1908 86 112 4 chr2 171160592 171160861 -79526993 + AluSx SINE Alu 1 298 -14 198 0 0 0 chr2 171160861 171160883 -79526971 + (TA)n Simple_repeat Simple_repeat 2 23 0 2651 51 0 0 chr2 171161209 171161520 -79526334 + AluY SINE Alu 1 311 0 344 389 0 16 chr2 171161746 171161931 -79525923 + MER5A DNA MER1_type 4 185 -4 1545 167 88 27 chr2 171161931 171162225 -79525629 + AluJb SINE Alu 1 312 0 496 255 113 49 chr2 171162583 171162639 -79525215 - MIR SINE MIR -18 244 193 4472 115 11 9 chr2 171162639 171163289 -79524565 - MER39B LTR ERV1 0 653 3 496 255 113 49 chr2 171163289 171163436 -79524418 - MIR SINE MIR -69 193 28 323 336 9 9 chr2 171163672 171163779 -79524075 + MIR3 SINE MIR 82 188 -20 184 347 21 11 chr2 171164151 171164246 -79523608 + MIR SINE MIR 38 133 -75 262 286 42 59 chr2 171164427 171164546 -79523308 - L2 LINE L2 -25 3288 3172 528 289 101 41 chr2 171164554 171165046 -79522808 + L1ME3A LINE L1 5301 5884 -286 2357 53 0 0 chr2 171165567 171165851 -79522003 + AluY SINE Alu 18 301 -10 213 121 0 0 chr2 171166742 171166775 -79521079 + (T)n Simple_repeat Simple_repeat 1 33 0 597 301 187 5 chr2 171167681 171167728 -79520126 + L1ME4a LINE L1 5563 5600 -521 1036 177 36 10 chr2 171167728 171167920 -79519934 - MER105 DNA DNA -4 200 4 597 301 187 5 chr2 171167920 171168268 -79519586 + L1ME4a LINE L1 5600 6030 -91 2305 161 22 2 chr2 171169530 171169934 -79517920 + L1MB3 LINE L1 5769 6180 -3 2162 135 3 0 chr2 171170310 171170622 -79517232 - AluSq SINE Alu 0 313 1 180 0 0 0 chr2 171170637 171170657 -79517197 + (A)n Simple_repeat Simple_repeat 1 20 0 2147 128 16 0 chr2 171170878 171171184 -79516670 - AluSq SINE Alu -2 311 1 21 0 0 0 chr2 171171566 171171587 -79516267 + AT_rich Low_complexity Low_complexity 1 21 0 936 121 0 0 chr2 171171602 171171726 -79516128 + AluSq/x SINE Alu 1 124 -189 1473 206 128 69 chr2 171172693 171173207 -79514647 - MLT1F1 LTR MaLR -3 564 30 2228 102 0 3 chr2 171174846 171175140 -79512714 - AluSx SINE Alu -19 293 1 186 352 35 35 chr2 171175538 171175683 -79512171 + L2 LINE L2 2831 2975 -338 24 53 0 0 chr2 171176199 171176237 -79511617 + AT_rich Low_complexity Low_complexity 1 38 0 267 175 0 0 chr2 171176576 171176633 -79511221 + A-rich Low_complexity Low_complexity 1 57 0 2185 127 0 0 chr2 171177267 171177559 -79510295 + AluSg SINE Alu 1 292 -18 363 231 73 34 chr2 171178121 171178262 -79509592 + MIR SINE MIR 114 262 0 235 323 152 64 chr2 171179461 171179836 -79508018 + L3 LINE CR1 1165 1572 -5 2295 110 0 0 chr2 171181364 171181674 -79506180 + AluSx SINE Alu 3 312 0 575 288 146 0 chr2 171183185 171183411 -79504443 - MIR SINE MIR -1 261 3 322 231 135 45 chr2 171183415 171183571 -79504283 - MIR3 SINE MIR -14 194 25 912 133 0 0 chr2 171184884 171185012 -79502842 - AluSg/x SINE Alu -11 299 172 1638 113 0 38 chr2 171185012 171185251 -79502603 - AluSx SINE Alu -82 230 1 2219 91 3 20 chr2 171185260 171185557 -79502297 - AluSg SINE Alu -18 292 1 224 303 42 34 chr2 171186180 171186299 -79501555 - MIR3 SINE MIR -31 177 58 11821 26 1 4 chr2 171186459 171188247 -79499607 + L1P2 LINE L1 4005 5787 -368 * 28093 30 8 2 chr2 171188245 171192355 -79495499 + L1PA4 LINE L1 2021 6155 0 440 158 0 0 chr2 171192583 171192659 -79495195 + AluS SINE Alu 230 305 -5 187 206 0 0 chr2 171195006 171195040 -79492814 + MER5A DNA MER1_type 1 34 -155 2004 142 3 0 chr2 171195065 171195360 -79492494 + AluSx SINE Alu 1 296 -16 644 282 120 37 chr2 171195895 171196149 -79491705 + L1ME4a LINE L1 2874 3105 -3041 2248 95 20 0 chr2 171196149 171196453 -79491401 + AluSg SINE Alu 1 310 0 644 282 120 37 chr2 171196453 171196590 -79491264 + L1ME4a LINE L1 3105 3229 -2917 992 128 0 0 chr2 171196590 171196723 -79491131 + FLAM_C SINE Alu 1 133 0 644 282 120 37 chr2 171196723 171197011 -79490843 + L1ME4a LINE L1 3229 3611 -2535 704 246 83 38 chr2 171197021 171197309 -79490545 + L1ME4a LINE L1 3691 3991 -2155 286 300 50 20 chr2 171197350 171197450 -79490404 - MIR SINE MIR -72 136 34 334 127 2 8 chr2 171197912 171198137 -79489717 + AluJb SINE Alu 3 288 -14 246 176 59 0 chr2 171198276 171198327 -79489527 - L2 LINE L2 -7 3306 3253 1178 188 195 16 chr2 171198900 171199156 -79488698 - AluJo SINE Alu 0 302 1 772 259 40 18 chr2 171199568 171199796 -79488058 + MIR SINE MIR 16 248 -14 2214 104 0 0 chr2 171199995 171200284 -79487570 - AluSg SINE Alu -21 289 1 2249 140 106 61 chr2 171201352 171201953 -79485901 + MER39 LTR ERV1 1 706 -1 1815 162 42 27 chr2 171202753 171203087 -79484767 - MER44D DNA MER2_type 0 609 1 36717 42 1 1 chr2 171203179 171207576 -79480278 + L1P LINE L1 4 4401 -1745 21 0 0 0 chr2 171207974 171207995 -79479859 + AT_rich Low_complexity Low_complexity 1 21 0 12365 123 88 50 chr2 171208199 171210506 -79477348 + Tigger1 DNA MER2_type 25 2418 0 422 317 48 63 chr2 171210840 171210989 -79476865 + L1ME4a LINE L1 4615 4765 -1381 1629 94 19 23 chr2 171210989 171211254 -79476600 + L1MA1 LINE L1 6039 6302 0 422 317 48 63 chr2 171211254 171211562 -79476292 + L1ME4a LINE L1 4765 5065 -1081 308 308 30 23 chr2 171211968 171212101 -79475753 + L1ME4a LINE L1 5793 5926 -195 33 56 0 0 chr2 171212355 171212409 -79475445 + AT_rich Low_complexity Low_complexity 1 54 0 1704 114 20 0 chr2 171213534 171213789 -79474065 + L1MC1 LINE L1 6072 6331 -2 573 169 7 27 chr2 171214021 171214169 -79473685 + GA-rich Low_complexity Low_complexity 2 146 0 184 244 22 0 chr2 171214763 171214808 -79473046 - L2 LINE L2 -3 3310 3265 26 50 0 0 chr2 171215052 171215092 -79472762 + AT_rich Low_complexity Low_complexity 1 40 0 388 280 79 58 chr2 171215607 171215861 -79471993 - MIR SINE MIR -6 256 4 399 294 44 50 chr2 171216452 171216612 -79471242 - MIR3 SINE MIR -11 197 39 296 288 39 102 chr2 171216780 171216985 -79470869 + L2 LINE L2 3081 3272 0 243 323 113 15 chr2 171216990 171217123 -79470731 + L2 LINE L2 3167 3312 -1 193 319 0 0 chr2 171217523 171217570 -79470284 + MIR SINE MIR 28 74 -134 3007 137 43 0 chr2 171217708 171218198 -79469656 - L1PB4 LINE L1 -7 7211 6701 2473 106 50 24 chr2 171218198 171218610 -79469244 + MLT2A1 LTR ERVL 1 481 -34 261 0 0 0 chr2 171218628 171218657 -79469197 + (CA)n Simple_repeat Simple_repeat 2 30 0 201 147 0 0 chr2 171218689 171218723 -79469131 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 330 105 0 35 chr2 171218726 171218783 -79469071 + MLT2A2 LTR ERVL 399 453 0 13636 190 38 6 chr2 171218784 171222175 -79465679 - L1PB4 LINE L1 -514 6704 3211 554 128 53 11 chr2 171222175 171222269 -79465585 + MER4A LTR ERV1 1 98 -566 1885 148 3 22 chr2 171222269 171222621 -79465233 + MER4A LTR ERV1 261 664 0 4299 211 16 28 chr2 171222621 171223760 -79464094 - L1PB4 LINE L1 -3995 3214 2090 1645 168 204 11 chr2 171223761 171224118 -79463736 - MSTA LTR MaLR -2 426 1 2406 110 5 19 chr2 171224118 171224491 -79463363 - MSTA-int LTR MaLR 0 1580 1213 1610 150 48 48 chr2 171224491 171224824 -79463030 - THE1C LTR MaLR -38 337 5 805 149 75 0 chr2 171224829 171225031 -79462823 - L1PB4 LINE L1 -5120 2089 1845 1275 335 23 5 chr2 171225179 171225609 -79462245 - L1PB4 LINE L1 -6399 810 373 707 273 128 0 chr2 171225668 171225855 -79461999 + MIR SINE MIR 21 231 -31 297 261 15 0 chr2 171227955 171228020 -79459834 + MIR3 SINE MIR 98 163 -45 1351 247 21 35 chr2 171228024 171228400 -79459454 + LTR40b LTR ERVL 5 375 -87 225 0 0 0 chr2 171228422 171228447 -79459407 + (A)n Simple_repeat Simple_repeat 1 25 0 395 191 38 19 chr2 171228461 171228566 -79459288 + LTR40b LTR ERVL 354 460 -2 241 327 96 26 chr2 171228573 171228729 -79459125 - MER5B DNA MER1_type -3 175 9 233 312 104 0 chr2 171229521 171229598 -79458256 + L2 LINE L2 3188 3272 0 280 282 20 19 chr2 171230163 171230268 -79457586 + MIR SINE MIR 11 117 -91 230 302 78 47 chr2 171233365 171233494 -79454360 - L2 LINE L2 0 3313 3181 451 323 37 43 chr2 171233801 171234101 -79453753 + MLT1K LTR MaLR 271 568 -20 197 287 94 72 chr2 171234364 171234587 -79453267 + L2 LINE L2 2392 2619 -695 777 294 48 16 chr2 171239234 171239482 -79448372 - MIR SINE MIR -2 260 5 1032 253 8 12 chr2 171239537 171239778 -79448076 + MIR SINE MIR 13 252 -10 584 298 126 5 chr2 171241296 171241511 -79446343 + MIR SINE MIR 20 260 -2 636 159 28 0 chr2 171241685 171241792 -79446062 - Tigger3(Golem) DNA MER2_type 0 3038 2929 420 250 0 0 chr2 171241896 171241976 -79445878 - Tigger3(Golem) DNA MER2_type -2949 80 1 261 303 101 17 chr2 171243055 171243174 -79444680 + L2 LINE L2 3144 3272 0 247 130 22 0 chr2 171243202 171243248 -79444606 - MADE1 DNA Mariner -27 53 7 564 207 10 0 chr2 171243403 171244143 -79443711 + (TA)n Simple_repeat Simple_repeat 1 747 0 25 0 0 0 chr2 171244146 171244171 -79443683 + AT_rich Low_complexity Low_complexity 1 25 0 294 53 0 79 chr2 171244234 171244310 -79443544 + (TA)n Simple_repeat Simple_repeat 2 71 0 36 53 0 0 chr2 171245487 171245544 -79442310 + AT_rich Low_complexity Low_complexity 1 57 0 244 179 28 47 chr2 171245559 171245665 -79442189 + (TTATA)n Simple_repeat Simple_repeat 5 108 0 266 309 93 22 chr2 171245684 171245823 -79442031 - MIR SINE MIR -38 224 76 1932 125 70 25 chr2 171246084 171246443 -79441411 - THE1C LTR MaLR 0 375 1 2054 133 33 0 chr2 171246621 171246923 -79440931 - AluJo SINE Alu 0 312 1 1895 158 0 3 chr2 171247203 171247507 -79440347 - AluJb SINE Alu -9 303 1 349 316 76 68 chr2 171247657 171248052 -79439802 + L2 LINE L2 2851 3248 -65 1058 53 0 0 chr2 171248059 171248190 -79439664 + AluSp/q SINE Alu 183 313 0 266 270 276 13 chr2 171249011 171249163 -79438691 - MIR SINE MIR -37 225 34 505 286 15 8 chr2 171249879 171250012 -79437842 + MIR SINE MIR 89 222 -40 1139 202 23 5 chr2 171250202 171250420 -79437434 - MER58A DNA MER1_type -2 222 1 308 43 22 0 chr2 171251255 171251301 -79436553 + (GA)n Simple_repeat Simple_repeat 1 47 0 229 188 21 0 chr2 171251444 171251492 -79436362 + L2 LINE L2 3265 3313 0 195 326 169 11 chr2 171252401 171252579 -79435275 - L2 LINE L2 -94 3219 3014 471 254 34 115 chr2 171252724 171252933 -79434921 + L2 LINE L2 3120 3311 -2 5721 116 26 45 chr2 171253305 171254441 -79433413 + L1PB1 LINE L1 5027 6151 0 192 269 0 0 chr2 171255767 171255819 -79432035 + L2 LINE L2 3262 3313 0 1902 167 0 7 chr2 171255924 171256218 -79431636 - AluJo SINE Alu -20 292 1 1198 111 43 34 chr2 171256357 171256592 -79431262 - L1MA8 LINE L1 -4 6287 6051 4109 128 31 54 chr2 171256705 171258135 -79429719 - L1MA8 LINE L1 -243 6048 4657 4673 149 14 11 chr2 171258139 171258945 -79428909 - L1MA8 LINE L1 -2037 4109 3302 22 0 0 0 chr2 171260103 171260125 -79427729 + AT_rich Low_complexity Low_complexity 1 22 0 1113 173 0 69 chr2 171260323 171260554 -79427300 - AluJo SINE Alu -13 299 85 441 320 69 11 chr2 171261047 171261222 -79426632 - MIR SINE MIR -18 244 60 639 278 109 17 chr2 171261750 171261980 -79425874 + MIR SINE MIR 1 251 -11 889 219 109 13 chr2 171262869 171263107 -79424747 + MIR SINE MIR 2 262 0 23 33 0 0 chr2 171263179 171263209 -79424645 + AT_rich Low_complexity Low_complexity 1 30 0 258 324 83 0 chr2 171263305 171263413 -79424441 - MIR SINE MIR -75 133 17 29 0 0 0 chr2 171263746 171263775 -79424079 + AT_rich Low_complexity Low_complexity 1 29 0 236 320 72 10 chr2 171264173 171264270 -79423584 + MIR SINE MIR 44 146 -62 216 0 0 0 chr2 171264463 171264487 -79423367 + (A)n Simple_repeat Simple_repeat 1 24 0 196 53 53 35 chr2 171265297 171265354 -79422500 + (TA)n Simple_repeat Simple_repeat 2 59 0 1899 118 34 12 chr2 171266756 171267078 -79420776 + L1MA6 LINE L1 5966 6294 -6 229 218 26 77 chr2 171267718 171267796 -79420058 + T-rich Low_complexity Low_complexity 5 78 0 3769 195 66 19 chr2 171267846 171269300 -79418554 - L1MD1 LINE L1 -107 6529 5009 2812 156 52 20 chr2 171269313 171269909 -79417945 - L1MD1 LINE L1 -4009 2531 1917 1687 247 73 44 chr2 171269912 171270428 -79417426 - L1MD1 LINE L1 -5828 712 94 1377 184 27 12 chr2 171270424 171270761 -79417093 + L1M4 LINE L1 2155 2496 -3650 * 3763 142 55 0 chr2 171270759 171271399 -79416455 + L1MA8 LINE L1 5465 6139 -152 29 60 0 0 chr2 171271399 171271449 -79416405 + AT_rich Low_complexity Low_complexity 1 50 0 2671 75 11 19 chr2 171271449 171271807 -79416047 - L1PB1 LINE L1 -2 6865 6509 240 35 0 0 chr2 171271807 171271836 -79416018 + (TG)n Simple_repeat Simple_repeat 1 29 0 2671 75 11 19 chr2 171271836 171271848 -79416006 - L1PB1 LINE L1 -358 6509 6498 26 74 0 0 chr2 171271867 171271921 -79415933 + AT_rich Low_complexity Low_complexity 1 54 0 2682 96 3 16 chr2 171271940 171272326 -79415528 - L1PB1 LINE L1 -361 6506 6126 8361 106 32 16 chr2 171272328 171274138 -79413716 - L1PB1 LINE L1 -4247 2616 634 1022 106 6 0 chr2 171274176 171274336 -79413518 + L1MA8 LINE L1 6128 6288 -3 5514 223 70 5 chr2 171274343 171275038 -79412816 + L1M4 LINE L1 3439 4087 -2059 312 27 0 0 chr2 171275038 171275075 -79412779 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 5514 223 70 5 chr2 171275075 171275852 -79412002 + L1M4 LINE L1 4087 5007 -1139 1261 162 32 5 chr2 171275862 171276078 -79411776 - MSTA LTR MaLR 0 428 207 483 218 73 0 chr2 171276081 171276205 -79411649 + L1M4 LINE L1 5059 5191 -955 * 1185 195 16 65 chr2 171276194 171276634 -79411220 + L1MB8 LINE L1 5059 5471 -713 1426 219 104 40 chr2 171276634 171277104 -79410750 - MLT1D LTR MaLR 0 505 6 2858 161 58 14 chr2 171277125 171277677 -79410177 + L1MB8 LINE L1 5488 6063 -115 4657 31 4 0 chr2 171277678 171278225 -79409629 + L1PA4 LINE L1 5605 6153 -2 763 144 0 8 chr2 171278235 171278367 -79409487 + L1MB8 LINE L1 6048 6178 0 532 317 24 6 chr2 171278533 171278700 -79409154 + MLT1F LTR MaLR 2 171 -371 188 312 28 128 chr2 171280129 171280176 -79407678 + L2 LINE L2 3146 3196 -76 1371 210 58 11 chr2 171280176 171280452 -79407402 - AluJo SINE Alu -23 289 1 188 312 28 128 chr2 171280452 171280545 -79407309 + L2 LINE L2 3196 3272 0 2036 110 24 0 chr2 171280965 171281256 -79406598 + AluSq SINE Alu 16 313 0 377 340 25 19 chr2 171283070 171283232 -79404622 + MIR3 SINE MIR 14 176 -32 280 338 118 23 chr2 171283375 171283807 -79404047 + L2 LINE L2 736 1208 -2106 1011 326 34 36 chr2 171283846 171284407 -79403447 + L2 LINE L2 2750 3313 0 396 0 0 0 chr2 171285467 171285511 -79402343 + (CA)n Simple_repeat Simple_repeat 2 45 0 259 362 9 17 chr2 171285955 171286071 -79401783 + MIR SINE MIR 28 142 -120 348 276 21 35 chr2 171287725 171287870 -79399984 + L1MC4a LINE L1 1188 1330 -4875 1142 207 4 65 chr2 171287917 171288163 -79399691 + MER8 DNA MER2_type 6 236 -3 424 283 115 56 chr2 171288171 171288493 -79399361 + HAL1 LINE L1 1413 1753 -754 29 60 0 0 chr2 171288690 171288740 -79399114 + AT_rich Low_complexity Low_complexity 1 50 0 226 204 0 0 chr2 171288744 171288793 -79399061 + MER116 DNA Mariner 4 52 -28 434 285 92 50 chr2 171288923 171289044 -79398810 + L1MC4a LINE L1 2145 2259 -3956 1837 145 36 36 chr2 171289044 171289409 -79398445 + L1MB7 LINE L1 5820 6184 0 434 285 92 50 chr2 171289409 171289453 -79398401 + L1MC4a LINE L1 2259 2300 -3915 2090 141 0 0 chr2 171289453 171289750 -79398104 - AluSx SINE Alu -15 297 1 434 285 92 50 chr2 171289750 171290006 -79397848 + L1MC4a LINE L1 2300 2542 -3673 21 89 0 0 chr2 171290087 171290143 -79397711 + AT_rich Low_complexity Low_complexity 1 56 0 23 33 0 0 chr2 171290214 171290244 -79397610 + AT_rich Low_complexity Low_complexity 1 30 0 257 271 86 0 chr2 171290518 171290658 -79397196 + L1MC4a LINE L1 2938 3089 -3126 371 299 107 31 chr2 171290695 171291341 -79396513 + L1MC4a LINE L1 3197 3891 -2324 237 192 96 0 chr2 171291433 171291506 -79396348 + L1MC5 LINE L1 7149 7228 -733 409 280 31 17 chr2 171291522 171291722 -79396132 + L1MC4a LINE L1 5532 5734 -505 728 299 15 0 chr2 171291722 171291926 -79395928 - MIR SINE MIR -4 258 52 323 293 84 19 chr2 171291926 171292168 -79395686 + L1MC4a LINE L1 5732 5893 -297 1406 86 30 5 chr2 171292483 171292701 -79395153 + L1PA10 LINE L1 5945 6167 0 1742 122 10 112 chr2 171292918 171293321 -79394533 - L1MC3 LINE L1 -23 7762 7401 24 32 0 0 chr2 171293592 171293623 -79394231 + AT_rich Low_complexity Low_complexity 1 31 0 1159 254 80 4 chr2 171294254 171294699 -79393155 - MER90 LTR ERV1 0 614 35 529 198 166 57 chr2 171296474 171296631 -79391223 + MER58B DNA MER1_type 168 341 0 422 288 64 72 chr2 171296731 171297217 -79390637 - L2 LINE L2 -91 3181 2687 189 107 0 0 chr2 171297747 171297775 -79390079 + (T)n Simple_repeat Simple_repeat 1 28 0 2847 13 3 0 chr2 171298212 171298527 -79389327 - AluYb8 SINE Alu -2 316 1 669 313 25 16 chr2 171300543 171300786 -79387068 - MIR SINE MIR 0 262 18 21 57 0 0 chr2 171300957 171300992 -79386862 + AT_rich Low_complexity Low_complexity 1 35 0 283 273 10 50 chr2 171301364 171301463 -79386391 - MIR3 SINE MIR -5 203 109 631 209 104 149 chr2 171301672 171302193 -79385661 - L2 LINE L2 -36 3277 2782 567 219 62 23 chr2 171302193 171302321 -79385533 + MER5A DNA MER1_type 1 133 -56 305 297 20 20 chr2 171303271 171303372 -79384482 + MIR SINE MIR 2 102 -160 1363 244 47 39 chr2 171303386 171303747 -79384107 - MLT1J1 LTR MaLR -75 371 8 519 196 0 0 chr2 171303782 171303874 -79383980 + MIR SINE MIR 71 162 -100 331 260 67 47 chr2 171304006 171304156 -79383698 + L1ME4a LINE L1 5953 6105 -16 288 273 187 50 chr2 171305928 171306113 -79381741 - MIR SINE MIR -51 211 4 1087 284 74 43 chr2 171306178 171306664 -79381190 + MLT1L LTR MaLR 42 542 -73 201 210 0 65 chr2 171306837 171306899 -79380955 + A-rich Low_complexity Low_complexity 4 61 0 1521 116 0 8 chr2 171307267 171307509 -79380345 - L1PA13 LINE L1 0 6163 5924 2151 120 0 3 chr2 171308013 171308314 -79379540 - AluJb SINE Alu -3 309 10 829 350 53 31 chr2 171308500 171308952 -79378902 - L2 LINE L2 -841 2473 2012 3483 234 54 57 chr2 171309148 171310526 -79377328 + L1MB5 LINE L1 1 1407 -5239 768 204 0 0 chr2 171310526 171310658 -79377196 + FLAM_C SINE Alu 1 132 -1 3483 234 54 57 chr2 171310658 171311235 -79376619 + L1MB5 LINE L1 1407 1984 -4662 4565 216 51 23 chr2 171311239 171311538 -79376316 + L1MB5 LINE L1 4018 4307 -2337 2703 91 6 0 chr2 171311538 171311891 -79375963 + THE1A LTR MaLR 1 355 0 11592 101 4 6 chr2 171311891 171313473 -79374381 + THE1A-int LTR MaLR 1 1580 0 2752 74 6 0 chr2 171313475 171313826 -79374028 + THE1A LTR MaLR 3 355 0 4565 216 51 23 chr2 171313826 171314803 -79373051 + L1MB5 LINE L1 4307 5334 -1310 3460 137 8 27 chr2 171314804 171315403 -79372451 + L1M1 LINE L1 15 602 -6963 * 16545 112 32 7 chr2 171315400 171318034 -79369820 + L1M1 LINE L1 819 3519 -4046 1975 184 15 11 chr2 171318026 171318482 -79369372 + L1MB5 LINE L1 5315 5772 -872 * 3558 179 24 28 chr2 171318494 171319253 -79368601 + L1MB5 LINE L1 5907 6662 -10 1490 165 45 88 chr2 171319463 171319862 -79367992 + MLT1B LTR MaLR 3 384 -6 337 195 1 0 chr2 171320851 171320927 -79366927 - MLT1H LTR MaLR 0 549 482 948 179 193 18 chr2 171321002 171321282 -79366572 - MER39 LTR ERV1 -122 585 257 355 281 78 8 chr2 171321250 171321378 -79366476 - MER39 LTR ERV1 -570 137 1 * 2002 159 0 3 chr2 171321414 171321722 -79366132 + AluSx SINE Alu 1 307 -5 311 313 141 6 chr2 171321841 171322004 -79365850 - MLT1H LTR MaLR -268 281 97 368 320 59 18 chr2 171322093 171322315 -79365539 + L1ME4a LINE L1 5636 5866 -255 22 56 0 0 chr2 171322323 171322359 -79365495 + AT_rich Low_complexity Low_complexity 1 36 0 2123 152 3 0 chr2 171322360 171322669 -79365185 - AluSx SINE Alu -2 310 1 20297 134 12 7 chr2 171322721 171324063 -79363791 + L1PA10 LINE L1 1708 3041 -3127 2231 102 3 3 chr2 171324063 171324367 -79363487 + AluY SINE Alu 1 304 -7 20297 134 12 7 chr2 171324367 171327453 -79360401 + L1PA10 LINE L1 3041 6162 -6 6344 161 4 1 chr2 171327477 171328635 -79359219 + L1PA13 LINE L1 4068 5229 -917 7683 25 0 0 chr2 171328641 171329575 -79358279 - L1PA4 LINE L1 -3 6152 5218 6528 78 8 7 chr2 171329574 171330526 -79357328 + L1PA13 LINE L1 5210 6162 -1 * 339 239 177 18 chr2 171330710 171330823 -79357031 + MIR SINE MIR 98 228 -34 1262 220 83 35 chr2 171331387 171331809 -79356045 - MER39 LTR ERV1 0 707 266 2364 61 7 0 chr2 171332706 171333000 -79354854 - AluY SINE Alu -15 296 1 655 234 63 36 chr2 171333020 171333353 -79354501 - L1MC5 LINE L1 -36 7925 7584 1065 190 28 12 chr2 171333467 171333714 -79354140 - L1PB4 LINE L1 -3 6153 5903 261 244 26 0 chr2 171333818 171333896 -79353958 - L1MC5 LINE L1 -585 7376 7297 423 305 118 22 chr2 171334145 171334477 -79353377 - L1MC5 LINE L1 -304 5817 5500 1640 130 16 8 chr2 171336802 171337079 -79350775 - AluSx SINE Alu 0 313 35 190 274 48 32 chr2 171338952 171339014 -79348840 + L2 LINE L2 3146 3208 -64 2550 62 0 0 chr2 171339270 171339579 -79348275 + AluY SINE Alu 1 309 -2 195 129 0 0 chr2 171341581 171341612 -79346242 + (TTCC)n Simple_repeat Simple_repeat 3 33 0 315 296 150 49 chr2 171341702 171341928 -79345926 + MIR SINE MIR 13 261 -1 270 56 0 0 chr2 171342104 171342140 -79345714 - MSTA LTR MaLR -392 36 1 1165 170 19 0 chr2 171342374 171342586 -79345268 + MER20 DNA MER1_type 1 216 -3 354 319 96 6 chr2 171342706 171342863 -79344991 - MIR SINE MIR -90 172 2 4215 210 85 40 chr2 171343715 171345161 -79342693 - L1MC4 LINE L1 0 8042 6467 2147 127 63 3 chr2 171345170 171345533 -79342321 - Tigger2 DNA MER2_type 0 2718 2334 263 188 62 0 chr2 171345791 171345871 -79341983 - Charlie4 DNA MER1_type -70 1891 1807 1143 209 11 8 chr2 171345894 171346162 -79341692 - Charlie4 DNA MER1_type -1675 286 18 192 219 167 42 chr2 171346612 171346708 -79341146 + MIR SINE MIR 85 192 -70 2043 97 6 82 chr2 171347303 171347634 -79340220 - AluSg SINE Alu -4 306 1 2153 110 0 23 chr2 171348059 171348351 -79339503 + AluSq SINE Alu 1 287 -26 1065 145 0 0 chr2 171348351 171348530 -79339324 + (GA)n Simple_repeat Simple_repeat 2 180 0 2153 110 0 23 chr2 171348530 171348545 -79339309 + AluSq SINE Alu 287 301 -12 1984 29 4 0 chr2 171351288 171351526 -79336328 + L1PA4 LINE L1 5912 6150 -5 6388 130 22 27 chr2 171352187 171354338 -79333516 - L1MA3 LINE L1 -4 7720 5592 16818 129 25 17 chr2 171354339 171357094 -79330760 - L1MA3 LINE L1 -4790 2775 1 549 232 27 0 chr2 171357098 171357210 -79330644 - MIR SINE MIR -113 149 35 341 290 85 30 chr2 171357543 171357743 -79330111 - LTR33 LTR ERVL -4 517 307 554 187 193 0 chr2 171358243 171358386 -79329468 - MER5A DNA MER1_type -11 178 4 2234 184 45 5 chr2 171359213 171359615 -79328239 + MER47B DNA MER2_type 1 418 0 684 0 0 0 chr2 171359712 171359788 -79328066 + (TAAAA)n Simple_repeat Simple_repeat 5 80 0 338 235 160 59 chr2 171360020 171360139 -79327715 + MIR SINE MIR 19 149 -59 247 325 209 0 chr2 171360613 171360819 -79327035 - MIR SINE MIR -10 252 4 646 270 146 21 chr2 171361263 171361496 -79326358 - MIR SINE MIR 0 262 1 288 77 0 0 chr2 171361819 171361858 -79325996 + (CA)n Simple_repeat Simple_repeat 2 40 0 2459 144 43 19 chr2 171362454 171363033 -79324821 - L1M2 LINE L1 -667 5624 5034 918 132 0 22 chr2 171363033 171363169 -79324685 - FLAM_C SINE Alu 0 133 1 2459 144 43 19 chr2 171363169 171363312 -79324542 - L1M2 LINE L1 -1257 5034 4896 939 209 17 0 chr2 171363671 171363848 -79324006 + MER5A DNA MER1_type 10 189 0 1598 155 44 0 chr2 171365520 171365798 -79322056 + AluJb SINE Alu 21 309 0 400 307 118 68 chr2 171367125 171367860 -79319994 + L2 LINE L2 2472 3308 -5 1446 170 62 38 chr2 171367923 171368212 -79319642 + AluJo SINE Alu 1 296 -16 269 344 128 0 chr2 171368443 171368568 -79319286 - L3b LINE CR1 -18 1565 1425 201 133 0 0 chr2 171369014 171369044 -79318810 + (TTTTC)n Simple_repeat Simple_repeat 5 34 0 531 287 29 0 chr2 171369547 171369683 -79318171 - MIR SINE MIR -122 140 1 1267 107 0 0 chr2 171369697 171369856 -79317998 + AluSq SINE Alu 1 159 -154 221 178 22 0 chr2 171370133 171370178 -79317676 + CT-rich Low_complexity Low_complexity 3 48 0 189 0 0 0 chr2 171370516 171370537 -79317317 + (A)n Simple_repeat Simple_repeat 1 21 0 229 294 131 39 chr2 171370570 171370723 -79317131 - L3 LINE CR1 -37 1540 1374 292 368 23 0 chr2 171370797 171370930 -79316924 - MIR SINE MIR -1 261 126 596 273 176 70 chr2 171371443 171372297 -79315557 + L3 LINE CR1 601 1544 -33 2644 119 10 83 chr2 171373058 171373538 -79314316 - MER65A LTR ERV1 0 445 1 1869 156 13 73 chr2 171374162 171374560 -79313294 + MLT1B LTR MaLR 1 374 -16 581 260 117 20 chr2 171374708 171374904 -79312950 + MIR SINE MIR 10 224 -38 267 250 200 43 chr2 171375687 171375827 -79312027 - MIR SINE MIR -42 220 59 21 0 0 0 chr2 171376008 171376029 -79311825 + AT_rich Low_complexity Low_complexity 1 21 0 738 191 32 0 chr2 171376100 171376226 -79311628 - FLAM_A SINE Alu -3 130 1 448 254 8 24 chr2 171376998 171377124 -79310730 - MIR SINE MIR -58 204 81 338 316 0 34 chr2 171378042 171378159 -79309695 - MIR SINE MIR -80 128 16 321 216 137 39 chr2 171380417 171380463 -79307391 + MER34 LTR ERV1 1 41 -501 1713 188 0 3 chr2 171380463 171380756 -79307098 + AluJo SINE Alu 5 296 -16 321 216 137 39 chr2 171380756 171380811 -79307043 + MER34 LTR ERV1 41 112 -430 * 1448 218 51 60 chr2 171380795 171381249 -79306605 + MER39 LTR ERV1 257 706 -1 338 238 105 19 chr2 171381571 171381676 -79306178 - MIR SINE MIR -84 178 65 677 84 21 0 chr2 171382149 171382244 -79305610 - L1PA13 LINE L1 -3 6160 6064 198 302 110 55 chr2 171382290 171382545 -79305309 + L2 LINE L2 3036 3304 -9 184 278 83 42 chr2 171382681 171382753 -79305101 + L3 LINE CR1 1499 1573 -4 524 341 66 12 chr2 171383151 171383409 -79304445 - LTR16A LTR ERVL -96 354 83 803 146 42 114 chr2 171386405 171386601 -79301253 - MER51C LTR ERV1 0 640 471 26 30 0 0 chr2 171386617 171386650 -79301204 + AT_rich Low_complexity Low_complexity 1 33 0 426 319 31 21 chr2 171387236 171387427 -79300427 + MIR SINE MIR 14 206 -56 299 287 148 9 chr2 171387419 171387527 -79300327 + L2 LINE L2 3189 3311 -2 * 989 172 0 64 chr2 171388914 171388983 -79298871 + L1M2 LINE L1 3 75 -6774 2575 67 0 10 chr2 171388983 171389297 -79298557 + AluY SINE Alu 1 311 0 989 172 0 64 chr2 171389297 171389431 -79298423 + L1M2 LINE L1 75 193 -6656 * 15447 198 36 21 chr2 171389413 171394650 -79293204 + L1M2 LINE L1 676 5991 -857 222 222 0 0 chr2 171395130 171395179 -79292675 - MIR SINE MIR -55 153 104 273 119 0 0 chr2 171395740 171395782 -79292072 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 919 158 0 0 chr2 171395905 171396038 -79291816 + FLAM_A SINE Alu 1 133 0 508 176 124 26 chr2 171398062 171398215 -79289639 - MIR SINE MIR 0 262 95 2200 131 0 0 chr2 171398776 171399073 -79288781 - AluSg SINE Alu -13 297 1 363 89 0 0 chr2 171399721 171399777 -79288077 + (TG)n Simple_repeat Simple_repeat 1 56 0 504 256 47 24 chr2 171400076 171400274 -79287580 + MER20B DNA MER1_type 2 214 -5 24 0 0 0 chr2 171400911 171400935 -79286919 + AT_rich Low_complexity Low_complexity 1 24 0 1003 159 0 0 chr2 171402270 171402433 -79285421 + HERVH LTR ERV1 2825 2987 -4726 941 140 7 0 chr2 171402427 171402577 -79285277 + HERVH LTR ERV1 3140 3290 -4423 * 7918 124 13 5 chr2 171402567 171404278 -79283576 + HERVH LTR ERV1 3492 5286 -1805 1511 127 0 0 chr2 171404279 171404499 -79283355 + HERVH LTR ERV1 5600 5819 -1894 2451 81 47 24 chr2 171404499 171404880 -79282974 + HERVH LTR ERV1 7324 7713 0 3114 58 2 12 chr2 171404880 171405294 -79282560 + LTR7 LTR ERV1 1 410 -40 203 321 0 0 chr2 171405515 171405571 -79282283 - L2 LINE L2 0 3272 3217 315 85 0 0 chr2 171405989 171406036 -79281818 + (GA)n Simple_repeat Simple_repeat 2 48 0 446 303 101 22 chr2 171406440 171406668 -79281186 - MIR SINE MIR -8 254 9 240 237 68 4 chr2 171408642 171408779 -79279075 + MER5A DNA MER1_type 4 189 0 1008 222 83 23 chr2 171409688 171409990 -79277864 + L2 LINE L2 2975 3294 -19 478 204 51 66 chr2 171411802 171411848 -79276006 - MER5B DNA MER1_type -16 162 117 2422 73 0 13 chr2 171411848 171412161 -79275693 + AluY SINE Alu 1 309 -2 478 204 51 66 chr2 171412161 171412251 -79275603 - MER5B DNA MER1_type -61 117 28 196 259 56 0 chr2 171412304 171412358 -79275496 + MIR3 SINE MIR 151 207 -1 538 197 142 16 chr2 171412474 171412633 -79275221 - MER5A DNA MER1_type -4 185 4 891 225 39 0 chr2 171412644 171412826 -79275028 + MER5A DNA MER1_type 1 189 0 255 61 0 0 chr2 171412855 171412888 -79274966 + (CCCCCA)n Simple_repeat Simple_repeat 3 35 0 321 252 92 25 chr2 171413467 171413586 -79274268 + MIR SINE MIR 71 197 -65 23 0 0 0 chr2 171415183 171415206 -79272648 + AT_rich Low_complexity Low_complexity 1 23 0 497 202 37 9 chr2 171415732 171415841 -79272013 - L2 LINE L2 -1 3312 3201 1672 153 31 8 chr2 171415842 171416103 -79271751 - AluJo SINE Alu -44 268 2 271 296 57 45 chr2 171416342 171416518 -79271336 - Charlie8 DNA MER1_type -2236 181 4 1217 158 75 11 chr2 171416683 171416978 -79270876 + L1MB8 LINE L1 5876 6182 -2 815 87 10 0 chr2 171417010 171417114 -79270740 + FRAM SINE Alu 41 145 -31 31 44 0 0 chr2 171417121 171417166 -79270688 + AT_rich Low_complexity Low_complexity 1 45 0 350 304 7 29 chr2 171417599 171417737 -79270117 + MIR SINE MIR 120 254 -8 2135 118 7 7 chr2 171418042 171418348 -79269506 + AluSq SINE Alu 1 306 -7 26 64 0 0 chr2 171418951 171418998 -79268856 + AT_rich Low_complexity Low_complexity 1 47 0 354 305 24 67 chr2 171422057 171422221 -79265633 - MIR SINE MIR -46 216 60 386 349 35 75 chr2 171422338 171422656 -79265198 - L2 LINE L2 -1 3271 2967 243 300 45 18 chr2 171425016 171425126 -79262728 - MIR SINE MIR 0 262 150 216 227 15 30 chr2 171425608 171425674 -79262180 - L2 LINE L2 0 3272 3208 444 136 19 19 chr2 171426343 171426446 -79261408 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 333 0 0 0 chr2 171426549 171426586 -79261268 + (CA)n Simple_repeat Simple_repeat 2 38 0 322 256 116 72 chr2 171426645 171426895 -79260959 + L1ME4a LINE L1 5525 5785 -336 444 218 38 15 chr2 171426919 171427052 -79260802 - MER104 DNA Tc2 -37 143 8 262 261 93 43 chr2 171427053 171427310 -79260544 + L1ME4a LINE L1 5776 6045 -76 511 276 0 6 chr2 171428041 171428204 -79259650 - L1M4 LINE L1 -2685 3461 3300 582 173 40 63 chr2 171428690 171428881 -79258973 + L1MA9 LINE L1 6078 6265 -40 341 147 0 15 chr2 171428929 171428997 -79258857 + (GAA)n Simple_repeat Simple_repeat 3 69 0 284 255 102 0 chr2 171429559 171429657 -79258197 - MIR SINE MIR -62 146 39 287 275 211 7 chr2 171429669 171429811 -79258043 + MIR SINE MIR 42 212 -50 1729 184 10 0 chr2 171429943 171430261 -79257593 - AluJb SINE Alu 0 312 1 1180 57 0 19 chr2 171430383 171430541 -79257313 - L1PA6 LINE L1 -5 6149 5995 463 338 101 9 chr2 171430607 171430826 -79257028 + MIR SINE MIR 20 258 -4 385 239 169 11 chr2 171431194 171431378 -79256476 + MLT1J1 LTR MaLR 66 278 -168 253 283 33 11 chr2 171431401 171431493 -79256361 + MLT1J2 LTR MaLR 343 436 -14 406 231 8 43 chr2 171432471 171432588 -79255266 + MER94 DNA DNA 2 114 -20 461 218 26 22 chr2 171432954 171433124 -79254730 + MLT1J2 LTR MaLR 70 237 -172 316 221 4 31 chr2 171433159 171433264 -79254590 + MLT1I LTR MaLR 316 449 -1 449 250 33 0 chr2 171434706 171434798 -79253056 - L2 LINE L2 -44 3228 3134 345 231 0 0 chr2 171435954 171436019 -79251835 - MER5A DNA MER1_type -6 183 119 196 349 38 47 chr2 171435971 171436077 -79251777 + MER5A DNA MER1_type 35 139 -50 * 397 270 0 11 chr2 171436137 171436226 -79251628 - MER5A DNA MER1_type -100 89 2 340 308 33 66 chr2 171436306 171436488 -79251366 - MER5B DNA MER1_type 0 178 3 252 0 0 0 chr2 171436506 171436534 -79251320 + (TA)n Simple_repeat Simple_repeat 2 29 0 355 160 67 0 chr2 171437615 171437690 -79250164 + LTR5 LTR ERVK 1 80 -889 299 152 61 0 chr2 171437697 171437763 -79250091 + LTR5 LTR ERVK 900 969 0 186 103 0 0 chr2 171439379 171439408 -79248446 + (TC)n Simple_repeat Simple_repeat 2 30 0 678 226 0 0 chr2 171439414 171439547 -79248307 - FLAM_A SINE Alu 0 133 1 357 282 62 77 chr2 171441927 171442122 -79245732 + MIR SINE MIR 1 192 -70 1608 159 4 4 chr2 171443046 171443297 -79244557 - AluJb SINE Alu -61 251 1 23 0 0 0 chr2 171447250 171447273 -79240581 + AT_rich Low_complexity Low_complexity 1 23 0 384 22 0 0 chr2 171447472 171447517 -79240337 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 1607 191 11 0 chr2 171447522 171447794 -79240060 - AluSx SINE Alu -37 275 1 2277 96 3 0 chr2 171447926 171448219 -79239635 + AluSp SINE Alu 1 294 -19 285 337 0 0 chr2 171448963 171449049 -79238805 + MER117 DNA MER1_type 101 186 -11 22 0 0 0 chr2 171449156 171449178 -79238676 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 171451417 171451453 -79236401 + AT_rich Low_complexity Low_complexity 1 36 0 253 270 87 52 chr2 171451900 171452015 -79235839 - MIR SINE MIR 0 262 144 1593 172 11 4 chr2 171453234 171453548 -79234306 - AluJb SINE Alu 0 316 1 296 363 0 32 chr2 171453569 171453693 -79234161 + L2 LINE L2 3153 3272 0 21 0 0 0 chr2 171453789 171453810 -79234044 + AT_rich Low_complexity Low_complexity 1 21 0 498 263 68 0 chr2 171454803 171454936 -79232918 + MER63A DNA MER1_type 50 191 -19 365 336 29 7 chr2 171455112 171455252 -79232602 + MIR3 SINE MIR 58 200 -8 691 61 50 10 chr2 171455559 171455658 -79232196 - L1PA11 LINE L1 0 6174 6072 284 272 0 25 chr2 171458340 171458421 -79229433 + GA-rich Low_complexity Low_complexity 2 80 0 720 278 122 36 chr2 171459500 171459892 -79227962 + Charlie8 DNA MER1_type 2 427 -1990 486 151 23 0 chr2 171459939 171460025 -79227829 + ORSL DNA AcHobo 1 88 -187 783 176 47 12 chr2 171460096 171460266 -79227588 + ORSL DNA AcHobo 98 273 -2 496 269 63 23 chr2 171460884 171461059 -79226795 - MIR SINE MIR -76 186 5 1884 166 6 19 chr2 171461634 171461948 -79225906 + AluJb SINE Alu 3 312 0 502 239 60 33 chr2 171462752 171462936 -79224918 + L2 LINE L2 3075 3263 -50 2313 68 34 0 chr2 171463204 171463496 -79224358 - AluSc SINE Alu -7 302 1 390 301 120 14 chr2 171463518 171463794 -79224060 + L1MC4 LINE L1 5605 5909 -1899 247 268 48 30 chr2 171464393 171464561 -79223293 + L1ME LINE L1 5648 5818 -303 502 254 232 0 chr2 171464574 171464755 -79223099 - MER58A DNA MER1_type 0 224 2 1850 163 7 0 chr2 171466619 171466908 -79220946 + AluJo SINE Alu 1 291 -21 782 252 115 85 chr2 171467682 171468456 -79219398 + L1MC5 LINE L1 5762 6511 -1450 2499 61 0 3 chr2 171468456 171468753 -79219101 + AluY SINE Alu 1 296 -15 782 252 115 85 chr2 171468753 171469096 -79218758 + L1MC5 LINE L1 6511 6842 -1119 201 39 0 0 chr2 171469096 171469122 -79218732 + (CTAAA)n Simple_repeat Simple_repeat 5 30 0 782 252 115 85 chr2 171469122 171469878 -79217976 + L1MC5 LINE L1 6842 7700 -261 446 278 170 5 chr2 171470877 171471071 -79216783 - MIR SINE MIR -25 237 12 2126 117 13 0 chr2 171471966 171472264 -79215590 + AluSx SINE Alu 1 302 -10 201 246 29 29 chr2 171473017 171473086 -79214768 + MIR SINE MIR 180 248 -14 1374 161 18 0 chr2 171476569 171476786 -79211068 - MER58A DNA MER1_type -3 221 1 2184 113 0 16 chr2 171476933 171477244 -79210610 - AluSx SINE Alu -6 306 1 1498 248 120 80 chr2 171478265 171479504 -79208350 + L1MC4 LINE L1 6746 8034 -8 815 214 28 6 chr2 171480130 171480312 -79207542 + MER5A DNA MER1_type 3 188 -1 2305 88 3 6 chr2 171481089 171481418 -79206436 + L1PB1 LINE L1 5824 6151 0 490 256 176 20 chr2 171481720 171481919 -79205935 - L2 LINE L2 -7 3306 3077 213 284 0 54 chr2 171482965 171483039 -79204815 - L2 LINE L2 -5 3267 3198 237 167 0 0 chr2 171484066 171484120 -79203734 + (CATA)n Simple_repeat Simple_repeat 3 56 0 435 149 51 29 chr2 171484191 171484366 -79203488 + (TA)n Simple_repeat Simple_repeat 2 180 0 1441 241 47 16 chr2 171487081 171487508 -79200346 + MLT1J1 LTR MaLR 7 446 0 273 288 154 43 chr2 171487963 171488069 -79199785 + L2 LINE L2 2625 2718 -596 1527 76 141 24 chr2 171488069 171488318 -79199536 + L1PA16 LINE L1 5888 6165 -1 273 288 154 43 chr2 171488318 171488510 -79199344 + L2 LINE L2 2718 2956 -358 263 297 173 27 chr2 171489539 171489724 -79198130 + MIR SINE MIR 37 248 -14 479 280 87 7 chr2 171489744 171489894 -79197960 - MIR SINE MIR -12 250 89 210 71 0 0 chr2 171490168 171490196 -79197658 + (CA)n Simple_repeat Simple_repeat 1 28 0 404 189 27 0 chr2 171490817 171490891 -79196963 - MIR SINE MIR -117 145 70 1712 130 43 34 chr2 171491017 171491339 -79196515 - MER44D DNA MER2_type -8 601 7 182 282 18 118 chr2 171492173 171492283 -79195571 + MIR3 SINE MIR 104 202 -6 470 227 0 0 chr2 171492485 171492582 -79195272 - Tigger7 DNA MER2_type 0 2587 2491 2202 105 0 14 chr2 171493295 171493620 -79194234 + AluSx SINE Alu 1 312 0 229 378 13 74 chr2 171494445 171494675 -79193179 + L2 LINE L2 3057 3272 0 514 285 15 15 chr2 171495631 171495768 -79192086 + L2 LINE L2 3136 3272 0 341 330 121 13 chr2 171497476 171497700 -79190154 - L2 LINE L2 -6 3266 3019 1914 176 0 0 chr2 171499499 171499811 -79188043 + AluJb SINE Alu 1 312 0 720 322 176 2 chr2 171500914 171501318 -79186536 - L2 LINE L2 0 3313 2840 255 259 43 69 chr2 171502332 171502448 -79185406 - MIR SINE MIR -66 142 30 5077 46 36 0 chr2 171502617 171503253 -79184601 - L1PA8 LINE L1 0 6172 5514 2065 144 0 10 chr2 171503394 171503699 -79184155 - AluJb SINE Alu -10 302 1 2309 108 3 0 chr2 171503731 171504026 -79183828 - AluSx SINE Alu -16 296 1 756 279 82 19 chr2 171507192 171507511 -79180343 + MLT1J LTR MaLR 1 339 -172 187 186 70 0 chr2 171507834 171507877 -79179977 - MIR SINE MIR -56 206 161 1795 62 0 0 chr2 171511624 171511833 -79176021 - L1PA7 LINE L1 0 6154 5946 254 229 0 0 chr2 171512551 171512599 -79175255 - MIR3 SINE MIR -11 197 150 431 275 44 55 chr2 171513586 171513824 -79174030 - MIR SINE MIR -12 250 9 703 230 7 0 chr2 171514349 171514488 -79173366 - AluJb SINE Alu -2 310 171 371 129 0 65 chr2 171514514 171514576 -79173278 + AluY SINE Alu 118 175 -126 716 12 0 0 chr2 171514681 171514763 -79173091 - L1PA3 LINE L1 0 6155 6074 772 153 93 0 chr2 171514763 171514881 -79172973 - FLAM_C SINE Alu -12 131 3 197 339 15 0 chr2 171516400 171516465 -79171389 + MIR3 SINE MIR 142 207 -1 43903 30 21 2 chr2 171517111 171523144 -79164710 + L1HS LINE L1 2 6155 0 437 339 106 17 chr2 171523624 171523804 -79164050 - MER91A DNA MER1_type 0 196 1 30 59 0 0 chr2 171524819 171524870 -79162984 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr2 171526064 171526085 -79161769 + AT_rich Low_complexity Low_complexity 1 21 0 294 123 0 0 chr2 171526297 171526354 -79161500 + (A)n Simple_repeat Simple_repeat 1 57 0 417 315 46 20 chr2 171526664 171526861 -79160993 + MIR SINE MIR 18 219 -43 213 300 0 50 chr2 171527827 171527927 -79159927 - L2 LINE L2 -211 3061 2967 1852 96 8 4 chr2 171528038 171528289 -79159565 - L1PA10 LINE L1 -2 6166 5915 1017 159 44 6 chr2 171528485 171528667 -79159187 - MER20 DNA MER1_type 0 219 31 481 222 0 0 chr2 171528905 171528995 -79158859 - L2 LINE L2 0 3272 3183 17266 39 1 2 chr2 171530109 171532856 -79154998 - L1PA5 LINE L1 -5 6149 3409 364 314 131 21 chr2 171532892 171533128 -79154726 - L2 LINE L2 -403 2911 2650 870 163 102 152 chr2 171533235 171533578 -79154276 - L1MC4 LINE L1 -369 7673 7348 728 169 97 58 chr2 171533640 171533794 -79154060 - AluJo SINE Alu -30 282 123 1166 208 102 12 chr2 171533899 171534144 -79153710 + MER74A LTR ERVL 292 558 0 340 159 43 0 chr2 171534144 171534213 -79153641 - L1MC4a LINE L1 -538 7270 7199 244 236 18 0 chr2 171534213 171534268 -79153586 + MER112 DNA MER1_type 9 64 -196 324 0 0 0 chr2 171534268 171534304 -79153550 + (TG)n Simple_repeat Simple_repeat 2 37 0 276 30 0 0 chr2 171534413 171534446 -79153408 + (CA)n Simple_repeat Simple_repeat 2 34 0 306 323 56 0 chr2 171534446 171534607 -79153247 + MER112 DNA MER1_type 89 258 -2 252 301 70 8 chr2 171534630 171534837 -79153017 - L2 LINE L2 -624 2690 2416 214 297 16 0 chr2 171535210 171535274 -79152580 + CT-rich Low_complexity Low_complexity 2 66 0 531 0 0 0 chr2 171535473 171535532 -79152322 + (CA)n Simple_repeat Simple_repeat 1 59 0 334 326 14 14 chr2 171536942 171537086 -79150768 + CT-rich Low_complexity Low_complexity 4 147 0 262 343 12 6 chr2 171537255 171537427 -79150427 + (TG)n Simple_repeat Simple_repeat 2 174 0 338 342 0 0 chr2 171538579 171538696 -79149158 + GA-rich Low_complexity Low_complexity 4 120 0 790 58 16 0 chr2 171538712 171538833 -79149021 + (GA)n Simple_repeat Simple_repeat 2 124 0 21 0 0 0 chr2 171539697 171539718 -79148136 + AT_rich Low_complexity Low_complexity 1 21 0 878 227 46 19 chr2 171539727 171539943 -79147911 - MIR SINE MIR 0 262 41 2202 114 0 16 chr2 171539991 171540298 -79147556 - AluSx SINE Alu -10 302 1 182 200 0 0 chr2 171540452 171540487 -79147367 - MIR SINE MIR -143 65 31 635 292 34 14 chr2 171540808 171541017 -79146837 + MIR SINE MIR 21 233 -29 24 53 0 0 chr2 171541035 171541073 -79146781 + AT_rich Low_complexity Low_complexity 1 38 0 204 40 0 0 chr2 171541216 171541241 -79146613 + (T)n Simple_repeat Simple_repeat 1 25 0 767 195 0 0 chr2 171541311 171541429 -79146425 - FLAM_C SINE Alu -15 118 1 229 289 29 67 chr2 171541713 171541817 -79146037 - MIR3 SINE MIR -5 203 104 41 21 0 0 chr2 171542340 171542388 -79145466 + AT_rich Low_complexity Low_complexity 1 48 0 2122 122 0 0 chr2 171542510 171542882 -79144972 + AluSg SINE Alu 1 310 0 368 282 118 46 chr2 171543488 171543683 -79144171 + MIR SINE MIR 13 221 -41 588 306 84 64 chr2 171543856 171543947 -79143907 - MLT1K LTR MaLR -2 586 498 2047 135 0 7 chr2 171543947 171544243 -79143611 + AluJo SINE Alu 1 294 -18 588 306 84 64 chr2 171544243 171544268 -79143586 - MLT1K LTR MaLR -90 498 475 384 123 37 49 chr2 171544268 171544349 -79143505 - MER116 DNA Mariner 0 80 1 588 306 84 64 chr2 171544349 171544685 -79143169 - MLT1K LTR MaLR -113 475 124 264 178 0 0 chr2 171546116 171546161 -79141693 - Alu SINE Alu -4 298 254 1554 186 45 0 chr2 171546162 171546431 -79141423 - AluJb SINE Alu -31 281 1 432 244 15 23 chr2 171546598 171546729 -79141125 - MLT1K LTR MaLR -10 578 449 192 273 146 64 chr2 171546974 171547084 -79140770 + MER5A DNA MER1_type 21 139 -50 3162 56 0 51 chr2 171547091 171547504 -79140350 - L1PA8 LINE L1 -4 6168 5777 389 64 3 3 chr2 171547504 171547561 -79140293 + L1PA8 LINE L1 5735 5791 -387 214 281 56 34 chr2 171547587 171547676 -79140178 - MIR3 SINE MIR -23 185 95 2904 243 136 118 chr2 171548101 171549393 -79138461 + L2 LINE L2 893 2229 -1085 2116 108 34 3 chr2 171549393 171549689 -79138165 - AluSx SINE Alu -7 305 1 2904 243 136 118 chr2 171549689 171550225 -79137629 + L2 LINE L2 2229 2754 -560 861 258 186 0 chr2 171550234 171550525 -79137329 - LTR16A LTR ERVL -5 445 101 1105 255 135 35 chr2 171550604 171551121 -79136733 + L2 LINE L2 2750 3313 0 504 282 144 0 chr2 171551929 171552117 -79135737 - MIR SINE MIR 0 262 48 216 0 0 0 chr2 171552294 171552318 -79135536 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 816 151 7 58 chr2 171553442 171553581 -79134273 - FLAM_A SINE Alu -1 132 1 261 0 0 0 chr2 171554252 171554281 -79133573 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 492 238 31 16 chr2 171554489 171554643 -79133211 - L1MD2 LINE L1 -18 6148 5993 2365 58 0 0 chr2 171555743 171556020 -79131834 + L1PA7 LINE L1 5878 6154 0 329 256 183 30 chr2 171556476 171556640 -79131214 + MIR SINE MIR 64 252 -10 217 305 34 119 chr2 171557362 171557539 -79130315 - L2 LINE L2 -107 3165 3004 202 329 123 18 chr2 171557552 171557771 -79130083 - L2 LINE L2 -523 2791 2550 21 0 0 0 chr2 171557927 171557948 -79129906 + AT_rich Low_complexity Low_complexity 1 21 0 594 221 54 30 chr2 171558040 171558216 -79129638 + MER20B DNA MER1_type 29 211 -8 310 273 13 0 chr2 171558333 171558410 -79129444 - MIR SINE MIR -72 190 113 35 0 0 0 chr2 171558790 171558825 -79129029 + AT_rich Low_complexity Low_complexity 1 35 0 259 274 146 106 chr2 171558904 171559261 -79128593 + L2 LINE L2 2894 3264 -8 1048 289 78 34 chr2 171559366 171559778 -79128076 - MLT1J LTR MaLR -54 457 28 728 330 38 8 chr2 171559807 171560071 -79127783 + L3 LINE CR1 1049 1320 -257 543 244 172 6 chr2 171561104 171561284 -79126570 - MIR SINE MIR -3 259 50 998 144 33 3 chr2 171561668 171562005 -79125849 + CT-rich Low_complexity Low_complexity 1 348 0 1786 161 7 16 chr2 171562010 171562315 -79125539 - AluJo SINE Alu -10 302 1 285 29 0 0 chr2 171563569 171563603 -79124251 + (TG)n Simple_repeat Simple_repeat 1 34 0 1977 128 0 7 chr2 171563603 171563884 -79123970 - AluSx SINE Alu -33 279 1 2072 144 0 3 chr2 171564109 171564408 -79123446 - AluSx SINE Alu -14 298 1 654 235 8 15 chr2 171564474 171564606 -79123248 - FLAM_C SINE Alu -2 131 1 217 246 0 0 chr2 171564930 171564987 -79122867 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 200 314 124 0 chr2 171565236 171565357 -79122497 - MIR SINE MIR -6 256 121 290 263 0 0 chr2 171565423 171565480 -79122374 - L2 LINE L2 -62 3210 3154 26 30 0 0 chr2 171565592 171565625 -79122229 + AT_rich Low_complexity Low_complexity 1 33 0 24 32 0 0 chr2 171565903 171565934 -79121920 + AT_rich Low_complexity Low_complexity 1 31 0 500 99 0 12 chr2 171566602 171566683 -79121171 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 235 311 0 0 chr2 171567375 171567449 -79120405 + L1MC4 LINE L1 6652 6725 -1317 270 211 40 13 chr2 171567695 171567771 -79120083 + CT-rich Low_complexity Low_complexity 1 78 0 21 0 0 0 chr2 171568821 171568842 -79119012 + AT_rich Low_complexity Low_complexity 1 21 0 484 261 60 27 chr2 171569355 171569539 -79118315 + MER20B DNA MER1_type 2 191 -592 2489 112 0 32 chr2 171569972 171570319 -79117535 - MER1B DNA MER1_type 0 337 2 845 129 8 0 chr2 171570755 171570879 -79116975 - AluSq/x SINE Alu -187 125 1 587 280 137 0 chr2 171571079 171571290 -79116564 + MIR SINE MIR 14 253 -9 553 293 65 14 chr2 171571324 171571539 -79116315 + MIR SINE MIR 23 248 -14 306 123 0 0 chr2 171571639 171571696 -79116158 + (T)n Simple_repeat Simple_repeat 1 57 0 1715 97 34 94 chr2 171571696 171573032 -79114822 - SVA Other Other -551 902 433 5727 65 21 52 chr2 171573060 171573900 -79113954 - SVA Other Other -520 866 53 643 36 0 45 chr2 171573900 171574012 -79113842 + (GGGAGA)n Simple_repeat Simple_repeat 3 109 0 201 74 0 0 chr2 171575053 171575080 -79112774 + (T)n Simple_repeat Simple_repeat 1 27 0 987 249 21 9 chr2 171575844 171576077 -79111777 + MIR SINE MIR 6 241 -21 25 0 0 0 chr2 171578456 171578481 -79109373 + AT_rich Low_complexity Low_complexity 1 25 0 315 263 42 11 chr2 171578591 171578686 -79109168 - L1ME4a LINE L1 -73 6048 5951 910 259 102 21 chr2 171578725 171579203 -79108651 - L1ME4a LINE L1 -249 5872 5356 274 293 164 0 chr2 171579927 171580043 -79107811 - MIR SINE MIR -56 206 72 425 286 182 13 chr2 171580287 171580441 -79107413 - MER5A DNA MER1_type 0 189 10 206 271 0 0 chr2 171580636 171580684 -79107170 + (TAA)n Simple_repeat Simple_repeat 1 48 0 288 268 138 8 chr2 171580697 171580820 -79107034 - MIR SINE MIR -52 210 72 209 56 0 28 chr2 171582025 171582061 -79105793 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 1797 151 4 0 chr2 171582063 171582334 -79105520 - AluJo SINE Alu -30 282 11 836 242 57 5 chr2 171582475 171582702 -79105152 - MLT1L LTR MaLR 0 615 278 610 334 113 19 chr2 171583107 171583574 -79104280 + L2 LINE L2 1879 2389 -925 285 304 24 120 chr2 171583817 171583984 -79103870 + L2 LINE L2 2424 2561 -753 1840 127 6 64 chr2 171583984 171584298 -79103556 - AluJb SINE Alu -16 296 1 285 304 24 120 chr2 171584298 171584380 -79103474 + L2 LINE L2 2561 2649 -665 482 330 54 68 chr2 171584643 171584979 -79102875 + L2 LINE L2 2942 3272 0 1274 191 6 85 chr2 171585702 171586021 -79101833 - AluJo SINE Alu -16 296 3 773 73 0 0 chr2 171586308 171586404 -79101450 + L1PA5 LINE L1 1 96 -6050 37835 56 5 2 chr2 171586404 171591918 -79095936 + L1PA5 LINE L1 623 6153 -1 498 211 33 46 chr2 171592239 171592391 -79095463 - L1ME4a LINE L1 -1 6120 5971 22 35 0 0 chr2 171592703 171592732 -79095122 + AT_rich Low_complexity Low_complexity 1 29 0 2350 98 3 0 chr2 171593581 171593888 -79093966 - AluSp SINE Alu -5 308 1 31 44 0 0 chr2 171593952 171593997 -79093857 + AT_rich Low_complexity Low_complexity 1 45 0 2062 152 0 60 chr2 171594059 171594428 -79093426 - MER7A DNA MER2_type -1 345 1 212 283 0 0 chr2 171594960 171595013 -79092841 + L2 LINE L2 3182 3234 -38 2426 76 0 0 chr2 171595054 171595096 -79092758 - L1PA8 LINE L1 -3 6169 6128 1116 257 6 30 chr2 171595096 171595431 -79092423 - L1MA8 LINE L1 -320 5971 5645 25 0 0 0 chr2 171596211 171596236 -79091618 + AT_rich Low_complexity Low_complexity 1 25 0 191 241 74 19 chr2 171596780 171596834 -79091020 - MIR SINE MIR -188 74 18 2146 213 49 67 chr2 171596947 171597515 -79090339 - L1MC5 LINE L1 -54 7907 7353 1087 174 123 0 chr2 171597515 171597710 -79090144 - MER20 DNA MER1_type 0 219 1 2146 213 49 67 chr2 171597710 171597875 -79089979 - L1MC5 LINE L1 -608 7353 7187 22 35 0 0 chr2 171598592 171598621 -79089233 + AT_rich Low_complexity Low_complexity 1 29 0 293 251 66 163 chr2 171599479 171599798 -79088056 + L2 LINE L2 1641 1928 -1386 1120 21 21 0 chr2 171600947 171601089 -79086765 + (TTTC)n Simple_repeat Simple_repeat 4 148 0 953 249 25 8 chr2 171601667 171601904 -79085950 + MIR SINE MIR 12 252 -10 360 0 0 0 chr2 171601906 171601946 -79085908 + (ATG)n Simple_repeat Simple_repeat 2 41 0 207 0 0 0 chr2 171602144 171602167 -79085687 + (TG)n Simple_repeat Simple_repeat 2 24 0 23 68 0 0 chr2 171603799 171603843 -79084011 + AT_rich Low_complexity Low_complexity 1 44 0 209 308 66 22 chr2 171604467 171604558 -79083296 - L2 LINE L2 -37 3276 3182 191 281 109 31 chr2 171604849 171604977 -79082877 - MIR3 SINE MIR -70 138 1 405 314 127 21 chr2 171605086 171605369 -79082485 + L2 LINE L2 2996 3308 -5 222 118 0 0 chr2 171605388 171605422 -79082432 + (T)n Simple_repeat Simple_repeat 1 34 0 1185 193 19 5 chr2 171605563 171605770 -79082084 - MER63A DNA MER1_type 0 210 1 218 31 0 31 chr2 171606031 171606063 -79081791 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2153 133 3 0 chr2 171606438 171606746 -79081108 - AluSx SINE Alu -3 309 1 1427 124 0 62 chr2 171607281 171607523 -79080331 - AluJb SINE Alu -4 308 82 396 235 111 50 chr2 171609370 171609706 -79078148 - MLT1H LTR MaLR 0 549 24 261 0 0 0 chr2 171609846 171609875 -79077979 + (A)n Simple_repeat Simple_repeat 1 29 0 332 261 60 45 chr2 171610295 171610429 -79077425 - L1ME4a LINE L1 -14 6107 5972 1230 224 0 26 chr2 171610558 171610826 -79077028 - AluJo SINE Alu -5 307 47 69 0 0 0 chr2 171612242 171612311 -79075543 + AT_rich Low_complexity Low_complexity 1 69 0 207 0 0 0 chr2 171612473 171612496 -79075358 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1378 157 102 47 chr2 171614839 171615113 -79072741 - AluJo SINE Alu -23 289 1 2226 127 0 6 chr2 171615573 171615917 -79071937 + AluSx SINE Alu 1 342 0 313 280 0 10 chr2 171616083 171616183 -79071671 - LTR33 LTR ERVL -396 125 27 993 158 34 38 chr2 171616597 171616806 -79071048 + MER3 DNA MER1_type 2 209 0 457 285 41 12 chr2 171618286 171618368 -79069486 - L1MC4a LINE L1 -1892 5916 5838 2143 96 7 0 chr2 171618368 171618701 -79069153 - AluY SINE Alu 0 335 1 2257 112 0 0 chr2 171618704 171619000 -79068854 - AluSq SINE Alu -17 296 1 457 285 41 12 chr2 171619000 171619154 -79068700 - L1MC4a LINE L1 -1971 5837 5668 380 296 52 47 chr2 171619339 171619511 -79068343 + MIR SINE MIR 20 192 -70 1795 178 7 3 chr2 171621644 171621937 -79065917 - AluJo SINE Alu -18 294 1 2092 161 3 0 chr2 171622923 171623227 -79064627 - AluSx SINE Alu -7 305 1 256 235 284 10 chr2 171625336 171625438 -79062416 - L2 LINE L2 -4 3309 3180 251 218 51 26 chr2 171625431 171625509 -79062345 - MIR3 SINE MIR -41 167 88 * 737 187 0 8 chr2 171625704 171625838 -79062016 - FLAM_C SINE Alu 0 133 1 331 288 134 42 chr2 171626060 171626418 -79061436 + MARNA DNA Mariner 21 411 -175 403 327 85 0 chr2 171626524 171626689 -79061165 + MIR SINE MIR 29 207 -55 399 41 0 0 chr2 171628484 171628533 -79059321 + (TG)n Simple_repeat Simple_repeat 2 50 0 959 69 8 0 chr2 171628614 171628745 -79059109 - L1PA5 LINE L1 -1 6153 6022 27 62 0 0 chr2 171628895 171628943 -79058911 + AT_rich Low_complexity Low_complexity 1 48 0 219 69 0 0 chr2 171629248 171629277 -79058577 + (TG)n Simple_repeat Simple_repeat 2 30 0 324 0 0 0 chr2 171629346 171629382 -79058472 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 21085 58 2 1 chr2 171629384 171632873 -79054981 - L1PA5 LINE L1 -12 6142 2650 1603 183 4 8 chr2 171632988 171633256 -79054598 + AluJo SINE Alu 38 304 -8 764 263 39 16 chr2 171633464 171633719 -79054135 + MIR SINE MIR 2 262 0 1389 253 156 19 chr2 171633793 171634597 -79053257 - HAL1 LINE L1 -130 2377 1464 294 325 106 14 chr2 171634630 171634913 -79052941 - HAL1 LINE L1 -1557 950 642 632 323 114 39 chr2 171635031 171635576 -79052278 - HAL1 LINE L1 -1812 695 110 23 0 0 0 chr2 171635858 171635881 -79051973 + AT_rich Low_complexity Low_complexity 1 23 0 15827 26 1 0 chr2 171635881 171638526 -79049328 - L1PA3 LINE L1 0 6155 3509 632 171 178 0 chr2 171638661 171638807 -79049047 + FRAM SINE Alu 1 166 -10 325 325 157 33 chr2 171638841 171639352 -79048502 + L2 LINE L2 1584 2157 -1157 269 357 31 0 chr2 171639514 171639643 -79048211 + L2 LINE L2 2244 2376 -938 565 294 31 0 chr2 171639989 171640149 -79047705 + MIR SINE MIR 98 262 0 189 0 0 0 chr2 171640773 171640794 -79047060 + (T)n Simple_repeat Simple_repeat 1 21 0 632 323 114 39 chr2 171641120 171641665 -79046189 + HAL1 LINE L1 110 695 -1812 289 317 84 20 chr2 171641864 171642066 -79045788 + HAL1 LINE L1 736 950 -1557 1288 254 163 19 chr2 171642099 171642898 -79044956 + HAL1 LINE L1 1464 2377 -130 764 263 39 16 chr2 171642972 171643227 -79044627 - MIR SINE MIR 0 262 2 1563 188 4 8 chr2 171643435 171643701 -79044153 - AluJo SINE Alu -10 302 38 21066 58 1 2 chr2 171643816 171647314 -79040540 + L1PA5 LINE L1 2650 6149 -5 437 244 35 0 chr2 171648713 171648828 -79039026 - ERVL LTR ERVL -1314 4450 4332 484 249 70 25 chr2 171648838 171649095 -79038759 - L1M4 LINE L1 -2694 3688 3444 1984 144 0 13 chr2 171649095 171649400 -79038454 - AluJb SINE Alu -11 301 1 484 249 70 25 chr2 171649400 171649603 -79038251 - L1M4 LINE L1 -2938 3444 975 1571 201 31 7 chr2 171649637 171649930 -79037924 - AluJo SINE Alu -12 300 1 2352 88 10 7 chr2 171650536 171650842 -79037012 - AluSx SINE Alu -3 309 3 1764 166 64 5 chr2 171650891 171651264 -79036590 - Charlie1 DNA MER1_type -433 2328 1934 971 133 0 7 chr2 171651425 171651568 -79036286 + FRAM SINE Alu 5 146 -30 180 0 0 0 chr2 171651568 171651588 -79036266 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 543 155 0 21 chr2 171651701 171651798 -79036056 + FRAM SINE Alu 68 162 -14 219 85 0 85 chr2 171652712 171652759 -79035095 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 7045 210 25 31 chr2 171654283 171655469 -79032385 + L1MB4 LINE L1 3389 4581 -1599 1306 182 49 66 chr2 171655469 171655755 -79032099 + AluJb SINE Alu 1 281 -31 7045 210 25 31 chr2 171655755 171655770 -79032084 + L1MB4 LINE L1 4581 4595 -1585 949 200 0 0 chr2 171655770 171655925 -79031929 + FRAM SINE Alu 1 155 -11 7045 210 25 31 chr2 171655925 171656707 -79031147 + L1MB4 LINE L1 4595 5352 -828 2161 138 0 3 chr2 171656707 171657018 -79030836 + AluSq SINE Alu 2 311 -2 7045 210 25 31 chr2 171657018 171657560 -79030294 + L1MB4 LINE L1 5352 5896 -284 1684 136 0 0 chr2 171657696 171657939 -79029915 + AluSg/x SINE Alu 65 307 -3 557 256 19 58 chr2 171658903 171659059 -79028795 + MIR SINE MIR 36 185 -77 303 302 151 34 chr2 171861085 171861290 -78826564 + MIR SINE MIR 13 241 -21 2503 54 3 0 chr2 171861340 171861637 -78826217 + AluY SINE Alu 1 298 -13 1968 133 13 10 chr2 171861814 171862116 -78825738 + AluSx SINE Alu 1 303 -9 222 37 0 0 chr2 171862572 171862599 -78825255 + (TG)n Simple_repeat Simple_repeat 2 28 0 628 133 39 39 chr2 171862624 171862752 -78825102 + AluSg/x SINE Alu 181 308 -1 1929 94 29 23 chr2 171862752 171863059 -78824795 - L1MA8 LINE L1 -184 6107 5799 2011 108 0 72 chr2 171863085 171863419 -78824435 + AluSx SINE Alu 3 312 0 325 204 129 21 chr2 171863428 171863521 -78824333 - L1ME4a LINE L1 -22 6099 5997 1736 197 0 9 chr2 171863710 171864025 -78823829 - AluJb SINE Alu 0 312 1 360 324 42 28 chr2 171864385 171864527 -78823327 - MIR SINE MIR -53 209 66 323 157 71 0 chr2 171864630 171864700 -78823154 + L1MD3 LINE L1 7917 7991 -4 851 154 8 8 chr2 171864820 171864950 -78822904 + FLAM_A SINE Alu 1 130 -3 2352 87 3 0 chr2 171865406 171865705 -78822149 - AluSg SINE Alu -10 300 1 1684 174 0 50 chr2 171865733 171865845 -78822009 + AluSx SINE Alu 1 117 -195 2451 77 0 0 chr2 171865845 171866144 -78821710 - AluY SINE Alu -12 299 1 1684 174 0 50 chr2 171866144 171866353 -78821501 + AluSx SINE Alu 117 306 -6 835 284 81 22 chr2 171866395 171866840 -78821014 + L1MC4 LINE L1 7024 7495 -547 1321 175 16 40 chr2 171866843 171867129 -78820725 - AluJb SINE Alu 0 317 38 226 214 0 0 chr2 171867161 171867203 -78820651 - AluJb SINE Alu -255 44 3 340 273 100 33 chr2 171867219 171867369 -78820485 + L1MC5 LINE L1 7323 7482 -479 1714 160 0 72 chr2 171867414 171867752 -78820102 + AluJb SINE Alu 5 312 0 915 290 68 46 chr2 171867845 171868267 -78819587 + L1ME3A LINE L1 4684 5095 -1075 1236 199 44 0 chr2 171868267 171868493 -78819361 - MER46A DNA MER2_type 0 236 1 915 290 68 46 chr2 171868493 171869212 -78818642 + L1ME3A LINE L1 5095 5851 -319 2238 113 0 3 chr2 171869333 171869644 -78818210 + AluSg SINE Alu 1 310 0 1169 152 59 5 chr2 171869777 171870060 -78817794 + MSTB LTR MaLR 1 371 -55 2306 85 7 0 chr2 171870060 171870355 -78817499 - AluSp SINE Alu -16 297 1 1169 152 59 5 chr2 171870355 171870415 -78817439 + MSTB LTR MaLR 371 426 0 1890 110 30 0 chr2 171870435 171870699 -78817155 + AluSg SINE Alu 33 304 -6 3734 184 58 62 chr2 171871274 171871620 -78816234 - L1MD2 LINE L1 -126 6233 5887 832 141 0 44 chr2 171871620 171871631 -78816223 - FLAM_C SINE Alu -173 129 119 2330 98 0 0 chr2 171871631 171871926 -78815928 + AluY SINE Alu 2 296 -15 832 141 0 44 chr2 171871926 171872049 -78815805 - FLAM_C SINE Alu -183 119 1 3734 184 58 62 chr2 171872049 171872526 -78815328 - L1MD2 LINE L1 -472 5887 5412 1677 176 35 24 chr2 171872526 171872815 -78815039 - AluJo SINE Alu -19 293 2 3734 184 58 62 chr2 171872815 171872871 -78814983 - L1MD2 LINE L1 -947 5412 5357 1737 207 25 58 chr2 171873531 171873976 -78813878 + MLT1D LTR MaLR 76 505 0 2046 131 23 3 chr2 171874108 171874413 -78813441 + AluSx SINE Alu 1 311 -1 2983 184 92 83 chr2 171874424 171875243 -78812611 + LTR1B LTR ERV1 1 826 0 1992 209 29 22 chr2 171875332 171875390 -78812464 - MLT1C LTR MaLR -1 466 410 2369 113 0 0 chr2 171875390 171875699 -78812155 + AluSx SINE Alu 1 309 -3 1992 209 29 22 chr2 171875699 171876094 -78811760 - MLT1C LTR MaLR -57 410 10 301 306 27 9 chr2 171876117 171876228 -78811626 + MER5A DNA MER1_type 38 150 -39 2234 123 7 0 chr2 171876231 171876541 -78811313 + AluSx SINE Alu 1 312 0 2570 64 0 0 chr2 171876645 171876943 -78810911 + AluY SINE Alu 1 298 -13 2322 105 0 6 chr2 171877725 171878038 -78809816 - AluSx SINE Alu -1 311 1 1057 114 69 0 chr2 171878038 171878213 -78809641 + L1MA8 LINE L1 6099 6285 -6 6651 77 21 25 chr2 171878233 171878280 -78809574 + L1PA14 LINE L1 4959 5005 -1156 2144 107 37 3 chr2 171878280 171878578 -78809276 + AluSx SINE Alu 1 308 -4 222 37 0 0 chr2 171878578 171878605 -78809249 + (CA)n Simple_repeat Simple_repeat 2 28 0 6651 77 21 25 chr2 171878605 171879773 -78808081 + L1PA14 LINE L1 5003 6159 -2 507 226 152 12 chr2 171880300 171880464 -78807390 + MER5A DNA MER1_type 3 189 0 1830 148 3 49 chr2 171880659 171880984 -78806870 + AluJb SINE Alu 1 310 -2 2095 113 3 7 chr2 171881155 171881446 -78806408 + AluSx SINE Alu 1 290 -22 3454 115 6 28 chr2 171881648 171882188 -78805666 + MER41B LTR ERV1 1 528 -107 694 126 118 8 chr2 171882193 171882312 -78805542 - FLAM_C SINE Alu 0 133 2 840 133 0 0 chr2 171882313 171882441 -78805413 + MER41A LTR ERV1 427 554 0 2547 62 3 0 chr2 171882755 171883062 -78804792 + AluSp SINE Alu 2 309 -4 787 249 59 52 chr2 171883114 171883403 -78804451 - MER21B LTR ERV1 -58 805 515 355 169 42 14 chr2 171883404 171883475 -78804379 + MER84 LTR ERVI 2 74 -433 3096 115 73 13 chr2 171883475 171883851 -78804003 + MER84 LTR ERV1 2 415 -92 2361 84 3 10 chr2 171883851 171884159 -78803695 - AluSp SINE Alu -7 306 1 3096 115 73 13 chr2 171884159 171884259 -78803595 + MER84 LTR ERV1 415 507 0 1837 223 22 71 chr2 171884259 171884805 -78803049 - MER21B LTR ERV1 -344 519 1 191 121 0 0 chr2 171884874 171884907 -78802947 - L2 LINE L2 -2 3311 3279 1058 111 130 96 chr2 171885360 171885630 -78802224 - L1MC1 LINE L1 0 6333 6055 862 247 116 45 chr2 171886140 171886432 -78801422 + MLT1J LTR MaLR 61 373 -138 866 216 6 12 chr2 171887462 171887624 -78800230 + AluJb SINE Alu 137 297 -15 2160 136 3 0 chr2 171888582 171888892 -78798962 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr2 171888904 171888927 -78798927 + AT_rich Low_complexity Low_complexity 1 23 0 2260 282 162 27 chr2 171888945 171890456 -78797398 + L1ME LINE L1 3472 5295 -869 1978 143 0 7 chr2 171890456 171890750 -78797104 + AluJb SINE Alu 1 292 -20 2260 282 162 27 chr2 171890750 171891152 -78796702 + L1ME LINE L1 5295 5641 -523 1506 253 119 40 chr2 171891154 171891700 -78796154 + MLT1E LTR MaLR 3 591 -2 2234 163 19 16 chr2 171891700 171892069 -78795785 + THE1C LTR MaLR 1 375 0 509 263 81 25 chr2 171893566 171893764 -78794090 + MIR SINE MIR 28 236 -26 273 257 38 9 chr2 171893794 171893899 -78793955 + L1M4 LINE L1 2982 3089 -3057 250 300 29 43 chr2 171893923 171894063 -78793791 + L1MEd LINE L1 3 140 -5979 2393 87 0 6 chr2 171894094 171894405 -78793449 + AluSc SINE Alu 1 309 0 2375 93 0 6 chr2 171895019 171895330 -78792524 + AluSx SINE Alu 2 310 -2 2482 113 32 59 chr2 171895350 171895616 -78792238 + L1PA13 LINE L1 5762 6015 -148 2181 105 13 0 chr2 171895616 171895921 -78791933 + AluSg SINE Alu 1 309 -1 2482 113 32 59 chr2 171895921 171896061 -78791793 + L1PA13 LINE L1 6015 6157 -6 21 0 0 0 chr2 171896061 171896082 -78791772 + AT_rich Low_complexity Low_complexity 1 21 0 2804 134 87 104 chr2 171897174 171897469 -78790385 - MER39B LTR ERV1 0 653 355 1906 131 51 0 chr2 171897469 171897743 -78790111 - AluSx SINE Alu -24 288 1 2804 134 87 104 chr2 171897743 171898103 -78789751 - MER39B LTR ERV1 -298 355 9 840 134 47 0 chr2 171898696 171898823 -78789031 + FLAM_A SINE Alu 1 133 0 1721 208 105 97 chr2 171898836 171899389 -78788465 - L1MC5 LINE L1 -35 7926 7379 753 137 292 0 chr2 171899389 171899550 -78788304 + MER3 DNA MER1_type 1 208 -1 249 149 43 0 chr2 171899556 171899603 -78788251 + MER3 DNA MER1_type 153 201 -8 1721 208 105 97 chr2 171899603 171899880 -78787974 - L1MC5 LINE L1 -586 7375 7036 * 2036 143 36 2 chr2 171899866 171900273 -78787581 - L1M4 LINE L1 -572 5606 5189 412 254 25 17 chr2 171900274 171900392 -78787462 + LTR16B LTR ERVL 86 204 -260 590 227 68 12 chr2 171900452 171900615 -78787239 + LTR16B LTR ERVL 293 464 0 662 271 60 5 chr2 171900797 171900996 -78786858 + MIR SINE MIR 47 256 -6 1577 151 18 32 chr2 171901535 171901820 -78786034 + AluJb SINE Alu 1 281 -31 806 193 0 15 chr2 171902166 171902301 -78785553 + AluSq/x SINE Alu 2 134 -179 2232 111 0 0 chr2 171902306 171902603 -78785251 + AluSx SINE Alu 6 302 -10 2031 80 105 4 chr2 171903954 171904230 -78783624 + AluSx SINE Alu 1 304 -8 2140 132 10 0 chr2 171904444 171904739 -78783115 - AluSx SINE Alu -14 298 1 30 27 0 0 chr2 171904902 171904939 -78782915 + AT_rich Low_complexity Low_complexity 1 37 0 725 251 126 22 chr2 171904988 171905219 -78782635 + MER46C DNA MER2_type 80 334 -4 217 217 0 0 chr2 171905821 171905867 -78781987 + GA-rich Low_complexity Low_complexity 2 47 0 207 176 0 0 chr2 171907734 171907768 -78780086 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 192 200 0 0 chr2 171907915 171907965 -78779889 + A-rich Low_complexity Low_complexity 1 50 0 259 233 0 0 chr2 171908010 171908070 -78779784 + (TTCA)n Simple_repeat Simple_repeat 2 61 0 2079 141 0 6 chr2 171910062 171910196 -78777658 + AluSx SINE Alu 1 134 -178 2502 53 7 3 chr2 171910196 171910495 -78777359 + L1PA5 LINE L1 5855 6154 0 2079 141 0 6 chr2 171910495 171910673 -78777181 + AluSx SINE Alu 134 311 -1 279 0 0 0 chr2 171911199 171911230 -78776624 + (TG)n Simple_repeat Simple_repeat 2 32 0 2205 111 3 0 chr2 171911338 171911635 -78776219 + AluSq SINE Alu 1 298 -15 237 298 0 0 chr2 171911864 171911921 -78775933 + L2 LINE L2 3189 3245 -68 22 88 0 0 chr2 171912207 171912264 -78775590 + AT_rich Low_complexity Low_complexity 1 57 0 1974 141 13 3 chr2 171912362 171912660 -78775194 + AluJb SINE Alu 1 301 -11 360 0 0 0 chr2 171913261 171913301 -78774553 + (TG)n Simple_repeat Simple_repeat 1 40 0 22 0 0 0 chr2 171913722 171913744 -78774110 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 171913792 171913814 -78774040 + AT_rich Low_complexity Low_complexity 1 22 0 189 107 0 0 chr2 171917004 171917032 -78770822 + (A)n Simple_repeat Simple_repeat 1 28 0 1713 181 29 0 chr2 171917840 171918117 -78769737 + AluJo SINE Alu 4 288 -24 1261 203 45 45 chr2 171918343 171918634 -78769220 + AluJb SINE Alu 4 294 -18 271 254 0 16 chr2 171918841 171918904 -78768950 - MER112 DNA MER1_type -195 65 4 28 29 0 0 chr2 171919558 171919593 -78768261 + AT_rich Low_complexity Low_complexity 1 35 0 1932 121 57 0 chr2 171919895 171920176 -78767678 + AluSx SINE Alu 1 297 -15 2394 90 0 0 chr2 171920434 171920744 -78767110 + AluY SINE Alu 1 310 -1 1948 235 37 14 chr2 171920954 171921388 -78766466 + MLT1F1 LTR MaLR 72 515 -52 1480 145 24 28 chr2 171921456 171921711 -78766143 + AluJo SINE Alu 33 286 -26 387 0 0 0 chr2 171921730 171921773 -78766081 + (CA)n Simple_repeat Simple_repeat 1 43 0 222 236 36 18 chr2 171922425 171922480 -78765374 + L2 LINE L2 3213 3268 -4 1841 175 0 16 chr2 171924669 171924984 -78762870 + AluJb SINE Alu 3 312 0 395 129 129 0 chr2 171925213 171925283 -78762571 + MADE1 DNA Mariner 1 79 -1 251 111 0 22 chr2 171925359 171925404 -78762450 + (TTTTC)n Simple_repeat Simple_repeat 5 48 0 1140 133 60 117 chr2 171925632 171925881 -78761973 + AluJo SINE Alu 36 270 -42 24 53 0 0 chr2 171925942 171925980 -78761874 + AT_rich Low_complexity Low_complexity 1 38 0 236 394 16 31 chr2 171926350 171926477 -78761377 + L2 LINE L2 3104 3228 -44 223 250 0 80 chr2 171929396 171929467 -78758387 - L2 LINE L2 -12 3301 3237 2071 133 3 0 chr2 171929467 171929776 -78758078 + AluJb SINE Alu 3 312 0 223 250 0 80 chr2 171929776 171929792 -78758062 - L2 LINE L2 -76 3237 3221 345 132 206 0 chr2 171929918 171929986 -78757868 + Tigger5 DNA MER2_type 2242 2323 0 253 341 22 75 chr2 171930023 171930249 -78757605 - L2 LINE L2 -210 3062 2849 817 321 127 21 chr2 171930401 171930872 -78756982 + LTR33 LTR ERVL 1 521 0 1778 179 0 19 chr2 171931127 171931434 -78756420 + AluJo SINE Alu 5 305 -7 828 215 49 20 chr2 171931804 171932050 -78755804 + L1ME3 LINE L1 5902 6154 -8 21 36 0 0 chr2 171933536 171933564 -78754290 + AT_rich Low_complexity Low_complexity 1 28 0 2382 74 3 10 chr2 171933956 171934265 -78753589 - AluY SINE Alu -4 307 1 466 333 25 0 chr2 171934355 171934553 -78753301 + L2 LINE L2 2262 2464 -850 201 393 0 0 chr2 171935438 171935522 -78752332 + L2 LINE L2 3152 3235 -37 841 129 0 0 chr2 171935770 171935914 -78751940 + FLAM_C SINE Alu 1 144 0 730 195 124 5 chr2 171936146 171936331 -78751523 - LTR33 LTR ERVL -307 214 8 414 0 0 0 chr2 171936517 171936563 -78751291 + (TG)n Simple_repeat Simple_repeat 2 47 0 215 91 0 45 chr2 171936868 171936912 -78750942 + (CAGAGA)n Simple_repeat Simple_repeat 3 44 0 528 298 67 33 chr2 171937259 171937588 -78750266 - L2 LINE L2 -939 2375 2036 2123 131 0 7 chr2 171937589 171937895 -78749959 + AluSx SINE Alu 1 304 -8 277 89 0 54 chr2 171938089 171938145 -78749709 - L1PA10 LINE L1 -5 6163 6111 1262 117 0 0 chr2 171938173 171938379 -78749475 - L1P LINE L1 -1626 4520 4315 3788 100 47 5 chr2 171938379 171938971 -78748883 + L1MA2 LINE L1 5680 6304 0 2016 38 8 4 chr2 171939219 171939502 -78748352 - AluY SINE Alu 0 330 47 296 286 157 20 chr2 171939690 171939837 -78748017 - L2 LINE L2 -158 3155 2989 935 267 105 82 chr2 171939875 171940400 -78747454 + LTR67 LTR ERVL 19 555 -2 381 347 85 0 chr2 171941017 171941193 -78746661 + MIR SINE MIR 59 249 -13 2091 127 3 0 chr2 171941421 171941713 -78746141 + AluSx SINE Alu 2 294 -18 1605 166 32 11 chr2 171942565 171942876 -78744978 + AluJb SINE Alu 1 317 0 1083 153 118 5 chr2 171943809 171944012 -78743842 + AluJb SINE Alu 1 226 -86 429 20 0 0 chr2 171944018 171944068 -78743786 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 204 347 28 0 chr2 171944265 171944337 -78743517 + MIR SINE MIR 187 260 -2 1241 207 108 25 chr2 171944472 171944795 -78743059 - MLT1D LTR MaLR 0 505 156 906 259 137 42 chr2 171945187 171945612 -78742242 + HAL1 LINE L1 1814 2278 -229 383 226 54 0 chr2 171946801 171946894 -78740960 - L2 LINE L2 -4 3309 3212 23 0 0 0 chr2 171949202 171949225 -78738629 + AT_rich Low_complexity Low_complexity 1 23 0 29 28 0 0 chr2 171949279 171949315 -78738539 + AT_rich Low_complexity Low_complexity 1 36 0 1146 144 15 10 chr2 171949325 171949527 -78738327 - L1PB3 LINE L1 -7 6147 5945 288 0 0 0 chr2 171949893 171949925 -78737929 + (TG)n Simple_repeat Simple_repeat 2 33 0 324 133 40 13 chr2 171949939 171950014 -78737840 + L1ME4a LINE L1 5987 6063 -58 2264 98 10 0 chr2 171950125 171950421 -78737433 - AluSx SINE Alu -11 301 3 207 288 17 17 chr2 171950430 171950489 -78737365 + L3b LINE CR1 1268 1326 -257 409 300 40 45 chr2 171950586 171950786 -78737068 - MIR SINE MIR -14 248 50 798 256 113 57 chr2 171950806 171951248 -78736606 - MLT1L LTR MaLR 0 615 149 216 341 33 0 chr2 171951675 171951766 -78736088 + L3b LINE CR1 1358 1451 -132 299 152 0 0 chr2 171952496 171952542 -78735312 + L2 LINE L2 3263 3308 -5 270 116 0 0 chr2 171952546 171952589 -78735265 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 703 266 111 66 chr2 171952603 171952981 -78734873 - LTR16A LTR ERVL 0 450 49 1464 223 60 38 chr2 171952981 171953434 -78734420 + MLT1C LTR MaLR 5 467 0 703 266 111 66 chr2 171953434 171953480 -78734374 - LTR16A LTR ERVL -401 49 7 226 323 20 10 chr2 171954635 171954734 -78733120 + GA-rich Low_complexity Low_complexity 4 103 0 466 277 48 23 chr2 171954762 171954964 -78732890 + L1M4 LINE L1 3553 3759 -2387 800 137 92 0 chr2 171954965 171955096 -78732758 + FRAM SINE Alu 2 144 -32 180 0 0 0 chr2 171955096 171955116 -78732738 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 645 277 47 27 chr2 171955122 171955378 -78732476 + L1M4 LINE L1 3751 4011 -2135 862 167 50 19 chr2 171955423 171955739 -78732115 + L1MA4A LINE L1 5897 6283 -20 230 271 14 0 chr2 171955736 171955806 -78732048 + L1M4 LINE L1 4484 4554 -1592 * 407 256 173 41 chr2 171955820 171956086 -78731768 + L1ME3A LINE L1 3865 4165 -1981 2383 248 79 25 chr2 171956095 171956206 -78731648 + L1ME3A LINE L1 4258 4362 -1808 1969 114 50 0 chr2 171956206 171956487 -78731367 + AluSg SINE Alu 1 295 -15 2383 248 79 25 chr2 171956487 171957062 -78730792 + L1ME3A LINE L1 4362 4905 -1265 2555 83 0 3 chr2 171957062 171957412 -78730442 - L1PA14 LINE L1 0 6161 5813 2383 248 79 25 chr2 171957412 171958216 -78729638 + L1PA14 LINE L1 4905 5836 -334 1355 162 114 8 chr2 171958264 171958589 -78729265 - L1MA1 LINE L1 0 6302 5961 216 135 0 0 chr2 171958590 171958627 -78729227 + (TC)n Simple_repeat Simple_repeat 1 37 0 1932 147 0 0 chr2 171958629 171958901 -78728953 - AluSx SINE Alu -38 274 3 4089 76 2 2 chr2 171958928 171959462 -78728392 - L1MA1 LINE L1 -316 5986 5450 1591 180 4 22 chr2 171959462 171959740 -78728114 - AluJb SINE Alu -27 285 13 4089 76 2 2 chr2 171959740 171959755 -78728099 - L1MA1 LINE L1 -851 5451 5437 241 235 99 0 chr2 171959745 171959826 -78728028 + L1ME3A LINE L1 5852 5940 -230 * 22 0 0 0 chr2 171960013 171960035 -78727819 + AT_rich Low_complexity Low_complexity 1 22 0 2414 86 3 0 chr2 171961433 171961735 -78726119 - AluSp SINE Alu -10 303 1 406 267 17 9 chr2 171962662 171962778 -78725076 - MLT1L LTR MaLR -1 614 498 1462 128 23 0 chr2 171962901 171963119 -78724735 - AluSx SINE Alu -67 245 23 13400 127 28 26 chr2 171963119 171964504 -78723350 + L1MA3 LINE L1 453 1834 -5731 249 33 0 0 chr2 171964504 171964534 -78723320 + (GA)n Simple_repeat Simple_repeat 1 30 0 13400 127 28 26 chr2 171964534 171964756 -78723098 + L1MA3 LINE L1 1834 2054 -5511 1957 158 0 3 chr2 171964756 171965066 -78722788 + AluSx SINE Alu 1 309 0 13400 127 28 26 chr2 171965066 171965893 -78721961 + L1MA3 LINE L1 2054 3573 -3992 1386 146 19 0 chr2 171965893 171966125 -78721729 + AluJb SINE Alu 76 311 0 12267 177 15 4 chr2 171966132 171968480 -78719374 + L1MA3 LINE L1 3682 6054 -1511 2391 96 0 3 chr2 171968482 171968794 -78719060 + AluY SINE Alu 1 311 0 44065 48 4 1 chr2 171968808 171974943 -78712911 + L1PA4 LINE L1 2 6155 0 5589 141 22 33 chr2 171974939 171975391 -78712463 + L1MA3 LINE L1 6042 6498 -1226 * 2260 102 0 7 chr2 171975391 171975686 -78712168 + AluSx SINE Alu 1 293 -19 5589 141 22 33 chr2 171975686 171976774 -78711080 + L1MA3 LINE L1 6498 7500 -224 1255 98 0 43 chr2 171976774 171976930 -78710924 + AluSg/x SINE Alu 134 282 -28 1510 92 53 0 chr2 171976930 171977157 -78710697 + L1MA3 LINE L1 7486 7724 0 1255 98 0 43 chr2 171977157 171977184 -78710670 + AluSg/x SINE Alu 282 309 -1 462 136 91 0 chr2 171978996 171979084 -78708770 + MER67B LTR ERV1 566 661 0 267 31 0 0 chr2 171979233 171979265 -78708589 + (GGA)n Simple_repeat Simple_repeat 3 34 0 21 0 0 0 chr2 171979329 171979350 -78708504 + AT_rich Low_complexity Low_complexity 1 21 0 1125 199 58 17 chr2 171979358 171979479 -78708375 + L1MA9 LINE L1 5971 6086 -226 2128 141 39 6 chr2 171979479 171979840 -78708014 - THE1C LTR MaLR 0 375 3 1125 199 58 17 chr2 171979840 171980010 -78707844 + L1MA9 LINE L1 6086 6274 -38 2001 113 8 0 chr2 171980020 171980285 -78707569 + AluSc SINE Alu 32 298 -11 1971 155 3 0 chr2 171980636 171980926 -78706928 - AluSq SINE Alu -22 291 1 1965 154 0 10 chr2 171980972 171981277 -78706577 + AluSx SINE Alu 1 302 -10 747 223 16 65 chr2 171981789 171981973 -78705881 - FAM SINE Alu 0 175 1 269 156 73 18 chr2 171982388 171982497 -78705357 + GA-rich Low_complexity Low_complexity 2 116 0 1719 178 7 17 chr2 171983102 171983395 -78704459 - AluJo SINE Alu -22 290 1 1216 154 3 109 chr2 171983577 171983710 -78704144 - MER4C LTR ERV1 0 465 320 348 24 0 0 chr2 171983710 171983751 -78704103 + (TTCC)n Simple_repeat Simple_repeat 2 42 0 1723 135 3 71 chr2 171983752 171984048 -78703806 - AluSx SINE Alu -36 276 1 1216 154 3 109 chr2 171984048 171984197 -78703657 - MER4C LTR ERV1 -144 321 211 1895 123 0 40 chr2 171984312 171984588 -78703266 + AluSx SINE Alu 28 292 -20 1293 155 97 12 chr2 171984659 171984917 -78702937 - LTR4 LTR ERV1 0 596 317 246 228 53 0 chr2 171985003 171985060 -78702794 - LTR4 LTR ERV1 -239 357 298 759 164 7 14 chr2 171985274 171985420 -78702434 - MER4C LTR ERV1 -320 145 1 1324 183 146 66 chr2 171985567 171986082 -78701772 - MER34C LTR ERV1 0 585 30 22 56 0 0 chr2 171986389 171986425 -78701429 + AT_rich Low_complexity Low_complexity 1 36 0 1531 168 82 4 chr2 171986486 171986754 -78701100 - AluJo SINE Alu -18 294 6 1460 118 30 106 chr2 171986865 171987195 -78700659 + LTR23 LTR ERV1 1 305 -132 2041 154 0 0 chr2 171987195 171987494 -78700360 + AluSx SINE Alu 1 299 -13 1930 132 46 0 chr2 171987494 171987775 -78700079 + AluSx SINE Alu 1 294 -18 24 32 0 0 chr2 171987775 171987806 -78700048 + AT_rich Low_complexity Low_complexity 1 31 0 828 168 7 0 chr2 171987812 171987949 -78699905 + LTR23 LTR ERV1 300 437 0 1351 182 107 4 chr2 171988190 171988443 -78699411 + AluJo SINE Alu 1 279 -33 7224 169 102 34 chr2 171988443 171989994 -78697860 - MER52A LTR ERV1 0 1755 1 987 218 0 0 chr2 171990239 171990413 -78697441 + AluJo SINE Alu 111 284 -28 195 42 0 0 chr2 171990418 171990442 -78697412 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 269 338 40 56 chr2 171990530 171990728 -78697126 + LTR23-int LTR ERV1 368 562 -6196 4176 206 69 61 chr2 171991142 171991535 -78696319 + LTR23-int LTR ERV1 751 1139 -5192 1616 118 0 0 chr2 171991535 171991747 -78696107 + AluSg/x SINE Alu 83 294 -18 4176 206 69 61 chr2 171991747 171992494 -78695360 + LTR23-int LTR ERV1 1139 2658 -3673 470 121 0 0 chr2 171992496 171992562 -78695292 + MER34C LTR ERV1 160 225 -360 729 179 46 122 chr2 171992608 171992871 -78694983 + LTR23-int LTR ERV1 1093 1335 -3788 3273 162 21 5 chr2 171992878 171993441 -78694413 + MER50 LTR ERV1 1 572 -162 2083 102 0 0 chr2 171993441 171993706 -78694148 - AluSx SINE Alu -16 296 32 274 103 0 0 chr2 171993719 171993758 -78694096 + LTR23-int LTR ERV1 2594 2632 -2491 1711 186 26 22 chr2 171993889 171994200 -78693654 - AluJb SINE Alu 0 312 1 910 270 113 48 chr2 171994875 171995390 -78692464 + LTR1B LTR ERV1 42 589 -237 1007 97 0 15 chr2 171995656 171995790 -78692064 - FLAM_C SINE Alu -11 132 1 1521 106 17 4 chr2 171995956 171996191 -78691663 + LTR23 LTR ERV1 200 437 0 1652 194 0 26 chr2 171996339 171996643 -78691211 + AluJo SINE Alu 3 298 -14 1760 197 0 0 chr2 171996810 171997115 -78690739 + AluJo SINE Alu 1 305 -7 575 244 94 22 chr2 171997139 171997319 -78690535 - MLT1K LTR MaLR -2 586 394 801 120 0 0 chr2 171997488 171997613 -78690241 + MER53 DNA DNA 9 133 -56 4760 17 6 0 chr2 171998443 171998980 -78688874 - L1PA3 LINE L1 0 6155 5616 360 276 103 9 chr2 171999093 171999209 -78688645 - MIR3 SINE MIR -1 207 81 1069 202 27 27 chr2 171999210 171999433 -78688421 + MER58A DNA MER1_type 1 223 -1 481 208 39 73 chr2 171999448 171999626 -78688228 - MLT1J2 LTR MaLR -214 236 65 2086 149 3 0 chr2 172000245 172000580 -78687274 - L1PB4 LINE L1 -4 6854 6519 254 222 32 0 chr2 172000600 172000624 -78687230 - L1P4 LINE L1 -309 5854 5831 3292 95 12 82 chr2 172000624 172000755 -78687099 - L1PB4 LINE L1 -328 5828 5689 2456 147 65 0 chr2 172000755 172001157 -78686697 - MSTA LTR MaLR 0 428 1 3292 95 12 82 chr2 172001157 172001614 -78686240 - L1PB4 LINE L1 -467 5689 5281 28 0 0 0 chr2 172001815 172001843 -78686011 + AT_rich Low_complexity Low_complexity 1 28 0 1186 150 93 0 chr2 172002065 172002258 -78685596 - AluJb SINE Alu -16 296 86 2141 133 3 16 chr2 172002268 172002584 -78685270 - AluSx SINE Alu 0 312 1 4000 176 29 31 chr2 172002584 172003163 -78684691 - L1PB4 LINE L1 -818 6030 5452 2382 86 0 3 chr2 172003163 172003466 -78684388 - AluSc SINE Alu -7 302 1 4000 176 29 31 chr2 172003466 172003774 -78684080 - L1PB4 LINE L1 -1396 5452 5145 2307 255 42 7 chr2 172003779 172004347 -78683507 - L1PB4 LINE L1 -5192 1657 1070 2287 148 23 52 chr2 172004933 172005003 -78682851 - MSTB LTR MaLR 0 426 355 2236 131 0 0 chr2 172005003 172005309 -78682545 + AluSx SINE Alu 1 306 -6 2287 148 23 52 chr2 172005309 172005677 -78682177 - MSTB LTR MaLR -71 355 1 1201 270 72 24 chr2 172005962 172006381 -78681473 - L1PB4 LINE L1 -6400 449 11 2396 99 0 6 chr2 172006845 172007157 -78680697 - AluSg SINE Alu 0 310 1 240 242 0 0 chr2 172007830 172007925 -78679929 + G-rich Low_complexity Low_complexity 1 95 0 211 329 0 0 chr2 172007938 172008011 -78679843 + G-rich Low_complexity Low_complexity 1 73 0 2324 64 3 3 chr2 172008136 172008441 -78679413 + AluY SINE Alu 1 305 0 275 289 67 15 chr2 172008478 172008613 -78679241 + L1ME3A LINE L1 5977 6118 -52 358 218 141 26 chr2 172008648 172008804 -78679050 - MER104 DNA MER2_type -3 177 4 2099 130 0 34 chr2 172008960 172009283 -78678571 - AluSx SINE Alu 0 312 1 1136 153 13 61 chr2 172009336 172009446 -78678408 - AluJo SINE Alu -90 222 127 351 78 0 0 chr2 172009446 172009497 -78678357 + (TTA)n Simple_repeat Simple_repeat 2 52 0 1136 153 13 61 chr2 172009497 172009614 -78678240 - AluJo SINE Alu -185 127 6 674 147 0 28 chr2 172009819 172009996 -78677858 + (G)n Simple_repeat Simple_repeat 1 172 0 371 210 94 91 chr2 172010820 172011106 -78676748 + L1ME4a LINE L1 5601 5887 -234 207 0 0 0 chr2 172011119 172011142 -78676712 + (TA)n Simple_repeat Simple_repeat 1 23 0 2289 88 7 3 chr2 172011143 172011438 -78676416 - AluSx SINE Alu -16 296 1 1810 188 0 0 chr2 172011609 172011907 -78675947 - AluJo SINE Alu -14 298 1 1070 153 0 25 chr2 172012011 172012174 -78675680 - AluJb SINE Alu -21 291 133 761 150 27 7 chr2 172013513 172013660 -78674194 - L1MC1 LINE L1 -244 6089 5940 1306 200 125 23 chr2 172014939 172015284 -78672570 - MLT1C LTR MaLR -2 465 86 23 0 0 0 chr2 172015660 172015683 -78672171 + AT_rich Low_complexity Low_complexity 1 23 0 484 258 8 16 chr2 172015827 172015955 -78671899 + LTR47B LTR ERVL 1 127 -316 1105 150 6 0 chr2 172016009 172016182 -78671672 + LTR47B LTR ERVL 270 443 0 1407 178 24 35 chr2 172016288 172016575 -78671279 + MER61A LTR ERV1 59 342 -1 1051 138 16 16 chr2 172016577 172016765 -78671089 + L1MA9 LINE L1 6088 6275 -37 1020 202 0 0 chr2 172016765 172016943 -78670911 + FRAM SINE Alu 1 175 -1 312 80 0 20 chr2 172016973 172017023 -78670831 + L1MA9 LINE L1 6264 6312 0 363 252 68 19 chr2 172017035 172017138 -78670716 - MIR SINE MIR -51 157 50 1530 203 45 0 chr2 172017198 172017488 -78670366 - AluJo SINE Alu -9 303 1 989 241 158 45 chr2 172017528 172018036 -78669818 - MLT1G LTR MaLR -3 552 1 2266 102 3 10 chr2 172018558 172018871 -78668983 + AluSp SINE Alu 1 311 -2 202 135 27 0 chr2 172019151 172019188 -78668666 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 578 135 9 108 chr2 172019297 172019311 -78668543 + MLT1G1 LTR MaLR 456 470 -125 2074 133 17 0 chr2 172019311 172019612 -78668242 - AluSx SINE Alu -6 306 1 578 135 9 108 chr2 172019612 172019708 -78668146 + MLT1G1 LTR MaLR 470 595 0 422 317 40 22 chr2 172019874 172020098 -78667756 + MLT1-int LTR MaLR 351 578 -793 763 118 0 0 chr2 172020156 172020258 -78667596 + AluSg/x SINE Alu 197 298 -11 730 246 69 78 chr2 172020258 172020446 -78667408 - MLT1G1 LTR MaLR -92 503 315 2271 117 31 60 chr2 172020446 172020832 -78667022 + THE1C LTR MaLR 1 375 0 730 246 69 78 chr2 172020832 172020898 -78666956 - MLT1G1 LTR MaLR -280 315 250 288 0 0 0 chr2 172020898 172020930 -78666924 + (GA)n Simple_repeat Simple_repeat 1 32 0 730 246 69 78 chr2 172020930 172020987 -78666867 - MLT1G1 LTR MaLR -345 250 194 1654 166 46 3 chr2 172020987 172021270 -78666584 - AluJo SINE Alu -12 300 6 730 246 69 78 chr2 172021270 172021398 -78666456 - MLT1G1 LTR MaLR -401 194 3 261 296 102 11 chr2 172021407 172021495 -78666359 - MIR SINE MIR -108 154 59 1936 156 0 25 chr2 172022754 172023074 -78664780 - AluSx SINE Alu 0 312 1 235 300 9 73 chr2 172023371 172023481 -78664373 - MIR3 SINE MIR -94 114 12 391 228 157 48 chr2 172023750 172023864 -78663990 - L1ME4a LINE L1 -3 6118 6018 1951 105 25 28 chr2 172023864 172024176 -78663678 - AluSx SINE Alu 0 311 1 391 228 157 48 chr2 172024176 172024411 -78663443 - L1ME4a LINE L1 -103 6018 5730 282 115 0 0 chr2 172024515 172024567 -78663287 + (GA)n Simple_repeat Simple_repeat 1 52 0 229 243 103 28 chr2 172025458 172025565 -78662289 + MER89 LTR ERV1 402 516 -43 887 92 17 0 chr2 172025965 172026084 -78661770 - LTR10C LTR ERV1 0 591 471 11419 48 56 13 chr2 172026084 172027517 -78660337 + HERV17 LTR ERV1 4525 6019 -2607 294 77 0 0 chr2 172027510 172027549 -78660305 + HERV17 LTR ERV1 7510 7548 -1078 * 2531 34 0 0 chr2 172027539 172027831 -78660023 + HERV17 LTR ERV1 8335 8626 0 2655 62 0 0 chr2 172027831 172028155 -78659699 + LTR17 LTR ERV1 1 324 -456 1955 165 3 16 chr2 172028486 172028802 -78659052 - AluJb SINE Alu 0 312 1 1464 206 13 13 chr2 172028803 172029104 -78658750 + MER4D LTR ERV1 581 881 -22 730 169 96 11 chr2 172029104 172029281 -78658573 + MER66B LTR ERV1 295 486 0 1389 179 132 26 chr2 172029317 172029658 -78658196 + LTR8A LTR ERV1 287 663 -64 31 0 0 0 chr2 172029664 172029695 -78658159 + AT_rich Low_complexity Low_complexity 1 31 0 329 96 45 45 chr2 172029695 172029873 -78657981 + (TA)n Simple_repeat Simple_repeat 1 178 0 21 57 0 0 chr2 172029873 172029908 -78657946 + AT_rich Low_complexity Low_complexity 1 35 0 956 279 12 8 chr2 172032286 172032526 -78655328 + MIR SINE MIR 1 241 -21 181 263 18 70 chr2 172033061 172033118 -78654736 - L2 LINE L2 -13 3300 3247 27 62 0 0 chr2 172033830 172033878 -78653976 + AT_rich Low_complexity Low_complexity 1 48 0 1966 134 17 0 chr2 172033897 172034360 -78653494 + MER51A LTR ERV1 1 634 0 39 38 0 0 chr2 172034566 172034619 -78653235 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr2 172034895 172034916 -78652938 + AT_rich Low_complexity Low_complexity 1 21 0 333 291 108 5 chr2 172035052 172035265 -78652589 - L1ME4a LINE L1 -212 5909 5675 333 291 52 0 chr2 172035854 172035988 -78651866 + L1M4 LINE L1 3838 3978 -2168 305 228 67 72 chr2 172036013 172036151 -78651703 - MLT1J2 LTR MaLR -14 426 302 261 265 122 28 chr2 172036171 172036401 -78651453 + L1M4 LINE L1 4089 4349 -1797 473 213 142 0 chr2 172036531 172036672 -78651182 + L1M4 LINE L1 4524 4684 -1462 2008 145 26 0 chr2 172036943 172037247 -78650607 + AluJb SINE Alu 1 312 0 33 43 0 0 chr2 172037616 172037663 -78650191 + AT_rich Low_complexity Low_complexity 1 47 0 1895 138 21 0 chr2 172037808 172038090 -78649764 + AluSx SINE Alu 23 310 -2 353 282 28 42 chr2 172038090 172038221 -78649633 - MER5B DNA MER1_type -47 131 1 315 235 68 31 chr2 172038463 172038625 -78649229 + L1ME4a LINE L1 5895 6062 -59 417 167 0 0 chr2 172038632 172038698 -78649156 - MER66A LTR ERV1 -126 352 287 306 174 29 14 chr2 172038703 172038772 -78649082 + L1ME4a LINE L1 6047 6116 -5 1949 163 0 0 chr2 172038808 172039108 -78648746 + AluSx SINE Alu 1 300 -12 821 165 0 0 chr2 172039231 172039364 -78648490 - FLAM_C SINE Alu -5 138 6 246 105 0 0 chr2 172039383 172039421 -78648433 + (T)n Simple_repeat Simple_repeat 1 38 0 189 0 0 0 chr2 172039525 172039546 -78648308 + (T)n Simple_repeat Simple_repeat 1 21 0 198 279 51 13 chr2 172039546 172039625 -78648229 + L3b LINE CR1 1224 1305 -278 208 314 128 0 chr2 172039651 172039753 -78648101 - L2 LINE L2 -2 3270 3156 799 220 31 0 chr2 172039830 172039989 -78647865 - MER5A DNA MER1_type -11 178 15 180 0 0 0 chr2 172040065 172040085 -78647769 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 631 324 136 54 chr2 172040160 172041016 -78646838 + L2 LINE L2 1050 1975 -1339 212 325 137 40 chr2 172041017 172041294 -78646560 + L2 LINE L2 2372 2675 -639 338 298 176 73 chr2 172041298 172041667 -78646187 + L2 LINE L2 2866 3272 0 382 315 85 21 chr2 172041795 172042030 -78645824 - MIR SINE MIR -1 261 12 295 219 0 123 chr2 172042241 172042283 -78645571 + L1ME LINE L1 3851 3897 -2249 1220 142 19 5 chr2 172042283 172042495 -78645359 + L1MA4 LINE L1 6086 6300 0 2150 113 0 32 chr2 172042503 172042814 -78645040 + AluSx SINE Alu 1 301 -11 295 219 0 123 chr2 172042814 172042876 -78644978 + L1ME LINE L1 3904 3950 -2196 2021 155 0 0 chr2 172043031 172043335 -78644519 - AluJb SINE Alu -8 304 1 400 280 24 0 chr2 172043511 172043636 -78644218 + L1ME LINE L1 4903 5030 -1116 366 306 128 30 chr2 172043688 172044389 -78643465 + L1ME LINE L1 5010 5604 -558 204 242 30 20 chr2 172044495 172044594 -78643260 + (TTAA)n Simple_repeat Simple_repeat 3 102 0 1681 218 32 21 chr2 172044680 172045115 -78642739 + MLT1E2 LTR MaLR 184 623 -3 1487 213 0 23 chr2 172045289 172045599 -78642255 - AluJb SINE Alu -9 303 1 225 167 0 0 chr2 172045653 172045695 -78642159 + CT-rich Low_complexity Low_complexity 1 42 0 793 186 16 0 chr2 172045695 172045824 -78642030 - FLAM_C SINE Alu -2 131 1 2323 110 3 0 chr2 172046030 172046339 -78641515 + AluSx SINE Alu 3 312 0 810 249 68 66 chr2 172046665 172047075 -78640779 + L2 LINE L2 1958 2368 -946 2185 82 31 7 chr2 172047128 172047419 -78640435 + AluSx SINE Alu 1 298 -14 1958 253 85 13 chr2 172047479 172048104 -78639750 + L1ME3A LINE L1 5413 6082 -88 2405 100 0 6 chr2 172048161 172048472 -78639382 + AluSx SINE Alu 1 309 -3 271 175 0 0 chr2 172048495 172048535 -78639319 - MER94 DNA DNA -94 40 1 1717 169 0 0 chr2 172048717 172048990 -78638864 - AluJb SINE Alu -39 273 1 23 0 0 0 chr2 172049045 172049068 -78638786 + AT_rich Low_complexity Low_complexity 1 23 0 2097 103 0 65 chr2 172049073 172049394 -78638460 + AluSx SINE Alu 1 300 -12 270 337 40 23 chr2 172049446 172049621 -78638233 - L3b LINE CR1 -69 1514 1337 280 240 64 48 chr2 172049784 172049909 -78637945 + L2 LINE L2 3138 3264 -8 2042 107 50 4 chr2 172049916 172050197 -78637657 - AluSq SINE Alu -19 294 1 1524 96 22 17 chr2 172050202 172050432 -78637422 - L1MA5A LINE L1 -6 6291 6061 1041 144 60 0 chr2 172050434 172050601 -78637253 - L1MD2 LINE L1 -10 6349 6173 23 33 0 0 chr2 172050601 172050631 -78637223 + AT_rich Low_complexity Low_complexity 1 30 0 297 89 0 0 chr2 172051005 172051050 -78636804 + (CA)n Simple_repeat Simple_repeat 2 46 0 528 209 108 7 chr2 172051050 172051189 -78636665 - MIR SINE MIR -17 245 93 322 287 96 34 chr2 172051424 172051457 -78636397 + L1ME3A LINE L1 5944 5974 -196 2012 139 10 16 chr2 172051457 172051586 -78636268 + AluSx SINE Alu 1 129 -183 2203 104 0 13 chr2 172051586 172051885 -78635969 + AluSx SINE Alu 1 295 -17 2012 139 10 16 chr2 172051885 172052058 -78635796 + AluSx SINE Alu 129 301 -11 322 287 96 34 chr2 172052058 172052233 -78635621 + L1ME3A LINE L1 5974 6165 -5 1864 173 0 3 chr2 172052252 172052552 -78635302 + AluJb SINE Alu 1 299 -13 995 170 0 0 chr2 172053147 172053300 -78634554 - AluSg/x SINE Alu -26 286 134 455 135 0 15 chr2 172054186 172054433 -78633421 + AluSx SINE Alu 1 310 -1 420 275 22 0 chr2 172054714 172054805 -78633049 + L2 LINE L2 3204 3296 -17 2225 106 0 3 chr2 172054806 172055107 -78632747 - AluSx SINE Alu -12 300 1 28 0 0 0 chr2 172055198 172055226 -78632628 + AT_rich Low_complexity Low_complexity 1 28 0 529 111 162 0 chr2 172055231 172055276 -78632578 - L1MA8 LINE L1 -12 6279 6243 339 25 0 0 chr2 172055276 172055316 -78632538 + (CA)n Simple_repeat Simple_repeat 1 40 0 529 111 162 0 chr2 172055316 172055369 -78632485 - L1MA8 LINE L1 -48 6243 6165 2038 151 0 3 chr2 172055369 172055674 -78632180 - AluJb SINE Alu -8 304 1 201 223 383 0 chr2 172056421 172056515 -78631339 + MIR3 SINE MIR 58 187 -21 837 207 24 0 chr2 172056588 172056752 -78631102 + AluJb SINE Alu 141 308 -4 271 306 28 0 chr2 172056800 172056872 -78630982 + L2 LINE L2 3240 3313 0 1817 110 92 14 chr2 172057015 172057297 -78630557 - AluJb SINE Alu -8 304 1 484 305 65 38 chr2 172057393 172057655 -78630199 + Charlie8 DNA MER1_type 9 277 -2140 1648 209 64 46 chr2 172057889 172058343 -78629511 - MLT1C LTR MaLR 0 467 6 2505 75 3 0 chr2 172058636 172058941 -78628913 - AluSp SINE Alu -6 307 2 547 264 64 7 chr2 172059082 172059222 -78628632 - L2 LINE L2 -1 3312 3165 2899 238 59 62 chr2 172059225 172059807 -78628047 - L2 LINE L2 -760 2554 1972 2309 105 3 0 chr2 172059807 172060111 -78627743 + AluSp SINE Alu 1 305 -8 2899 238 59 62 chr2 172060111 172060399 -78627455 - L2 LINE L2 -1342 1972 1685 240 35 0 0 chr2 172060399 172060428 -78627426 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2899 238 59 62 chr2 172060428 172060511 -78627343 - L2 LINE L2 -1629 1685 1603 374 213 32 64 chr2 172060780 172060874 -78626980 - L2 LINE L2 0 3313 3223 296 225 31 8 chr2 172061736 172061865 -78625989 + GA-rich Low_complexity Low_complexity 1 132 0 2262 106 0 0 chr2 172061915 172062207 -78625647 - AluSx SINE Alu -20 292 1 1135 75 0 7 chr2 172062216 172062362 -78625492 - AluSp/q SINE Alu -3 310 166 2284 109 0 0 chr2 172062954 172063256 -78624598 + AluSx SINE Alu 1 302 -10 221 108 54 0 chr2 172063540 172063577 -78624277 + MIR SINE MIR 92 130 -132 330 229 171 62 chr2 172065164 172065374 -78622480 + L1M2 LINE L1 817 1049 -5800 5296 135 70 33 chr2 172066205 172067095 -78620759 + MER49 LTR ERV1 1 923 0 1899 146 58 0 chr2 172067100 172067395 -78620459 + AluJb SINE Alu 1 312 0 607 164 149 15 chr2 172067420 172067554 -78620300 + FRAM SINE Alu 10 161 -15 690 245 143 33 chr2 172068523 172068954 -78618900 - LTR33 LTR ERVL 0 521 7 21 0 0 0 chr2 172069426 172069447 -78618407 + AT_rich Low_complexity Low_complexity 1 21 0 1869 143 21 0 chr2 172069447 172069734 -78618120 - AluJb SINE Alu -19 293 1 307 296 58 58 chr2 172069737 172069909 -78617945 + L3 LINE CR1 1376 1547 -30 2651 52 0 0 chr2 172069917 172070227 -78617627 + AluY SINE Alu 1 310 -1 1293 281 69 2 chr2 172071066 172071543 -78616311 + LTR33 LTR ERVL 1 509 -12 2092 101 35 3 chr2 172071738 172072025 -78615829 + AluSq SINE Alu 1 296 -17 1883 123 222 18 chr2 172072733 172073067 -78614787 - MER4A LTR ERV1 0 664 263 577 140 0 20 chr2 172073067 172073167 -78614687 - MER4A LTR ERV1 -566 98 1 1944 160 0 3 chr2 172073272 172073566 -78614288 - AluJo SINE Alu -14 298 6 625 276 86 47 chr2 172073951 172074230 -78613624 - MER74B LTR ERVL 0 622 333 706 229 39 17 chr2 172074237 172074416 -78613438 - MER74A LTR ERVL -367 191 9 2351 84 0 10 chr2 172074664 172074961 -78612893 - AluSc SINE Alu -15 294 1 1142 196 80 0 chr2 172075547 172075797 -78612057 + Charlie4 DNA MER1_type 6 275 -1686 1982 202 39 53 chr2 172076519 172077030 -78610824 - MLT1D LTR MaLR -1 504 1 31 0 0 0 chr2 172077125 172077156 -78610698 + AT_rich Low_complexity Low_complexity 1 31 0 1952 141 7 3 chr2 172077156 172077446 -78610408 - AluSx SINE Alu -21 291 1 607 215 25 60 chr2 172077456 172077600 -78610254 - L1ME LINE L1 -313 5808 5671 1706 272 51 68 chr2 172077600 172078266 -78609588 + MLT2F LTR ERVL 5 659 -4 607 215 25 60 chr2 172078266 172078321 -78609533 - L1ME LINE L1 -450 5671 5616 318 262 0 0 chr2 172078794 172078855 -78608999 - MER91 DNA MER1_type -76 64 4 632 283 139 0 chr2 172080203 172080426 -78607428 + L1MC4a LINE L1 5621 5874 -1934 283 339 83 31 chr2 172080691 172080712 -78607142 + L1MEd LINE L1 561 579 -5540 583 45 0 112 chr2 172080712 172080742 -78607112 - MADE1 DNA Mariner 0 80 48 2072 122 26 3 chr2 172080742 172081045 -78606809 + AluSx SINE Alu 1 310 -2 583 45 0 112 chr2 172081045 172081103 -78606751 - MADE1 DNA Mariner -32 48 2 283 339 83 31 chr2 172081103 172081273 -78606581 + L1MEd LINE L1 579 762 -5357 252 216 14 0 chr2 172081412 172081486 -78606368 - L1ME LINE L1 -960 5186 5112 258 228 95 69 chr2 172081529 172081707 -78606147 - L1ME3 LINE L1 -67 6103 5919 902 194 52 73 chr2 172081774 172081998 -78605856 + L1M4 LINE L1 4965 5183 -963 1850 171 3 3 chr2 172081998 172082307 -78605547 + AluJb SINE Alu 3 311 -1 902 194 52 73 chr2 172082307 172082370 -78605484 + L1M4 LINE L1 5183 5246 -900 * 5989 185 40 62 chr2 172082348 172082928 -78604926 + L1MB7 LINE L1 3807 4398 -1786 2278 111 0 3 chr2 172082928 172083234 -78604620 - AluSx SINE Alu -7 305 1 5989 185 40 62 chr2 172083234 172083351 -78604503 + L1MB7 LINE L1 4398 4516 -1668 2770 142 71 0 chr2 172083351 172083773 -78604081 - LTR47A LTR ERVL 0 452 1 5989 185 40 62 chr2 172083773 172084278 -78603576 + L1MB7 LINE L1 4516 5030 -1154 2186 153 10 81 chr2 172084278 172084671 -78603183 + MLT1A1 LTR MaLR 1 365 0 5989 185 40 62 chr2 172084671 172084805 -78603049 + L1MB7 LINE L1 5030 5165 -1019 1848 173 0 10 chr2 172084805 172085118 -78602736 + AluJb SINE Alu 1 310 -2 5989 185 40 62 chr2 172085118 172086196 -78601658 + L1MB7 LINE L1 5165 6165 -19 201 74 0 0 chr2 172086206 172086233 -78601621 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 1908 152 0 7 chr2 172086234 172086517 -78601337 - AluJo SINE Alu -31 281 1 376 186 0 160 chr2 172086633 172086789 -78601065 + L1M LINE L1 5256 5386 -778 485 298 77 27 chr2 172086806 172087143 -78600711 - L1MCc LINE L1 -4892 1531 1332 1941 161 3 7 chr2 172087143 172087453 -78600401 - AluJb SINE Alu -1 311 3 485 298 77 27 chr2 172087453 172087624 -78600230 - L1MCc LINE L1 -5091 1332 1171 1645 148 37 78 chr2 172087734 172087861 -78599993 + MLT1B LTR MaLR 1 132 -335 2137 97 59 0 chr2 172087861 172088151 -78599703 + AluSx SINE Alu 1 307 -5 1645 148 37 78 chr2 172088151 172088479 -78599375 + MLT1B LTR MaLR 132 466 -1 711 77 51 43 chr2 172088479 172088596 -78599258 - MSTB1 LTR MaLR 0 432 315 21 0 0 0 chr2 172089109 172089130 -78598724 + AT_rich Low_complexity Low_complexity 1 21 0 2352 77 3 7 chr2 172089172 172089469 -78598385 - AluSg SINE Alu -14 296 1 271 224 47 19 chr2 172089621 172089728 -78598126 + L1MB7 LINE L1 4325 4434 -1712 683 95 0 11 chr2 172089743 172089838 -78598016 + LTR7 LTR ERV1 1 94 -356 2430 74 0 3 chr2 172089847 172090144 -78597710 + AluY SINE Alu 1 296 -15 748 209 68 34 chr2 172090368 172090574 -78597280 + LTR7 LTR ERV1 238 450 0 996 271 124 25 chr2 172090574 172090999 -78596855 + L1MB7 LINE L1 4445 4935 -1211 953 150 0 0 chr2 172090999 172091132 -78596722 - FLAM_C SINE Alu 0 133 1 996 271 124 25 chr2 172091132 172091237 -78596617 + L1MB7 LINE L1 4935 5028 -1118 2832 124 19 0 chr2 172091249 172091660 -78596194 + MSTB LTR MaLR 1 419 -7 484 15 31 0 chr2 172091753 172091818 -78596036 + (TG)n Simple_repeat Simple_repeat 2 68 0 1972 107 21 7 chr2 172091921 172092229 -78595625 - AluSx SINE Alu 0 312 1 201 74 0 0 chr2 172092947 172092974 -78594880 + (T)n Simple_repeat Simple_repeat 1 27 0 4879 143 38 30 chr2 172093769 172094441 -78593413 + L1MB7 LINE L1 5009 5698 -486 825 184 0 0 chr2 172094441 172094566 -78593288 - FLAM_C SINE Alu -8 125 1 4879 143 38 30 chr2 172094566 172095003 -78592851 + L1MB7 LINE L1 5698 6130 -54 353 160 0 27 chr2 172095345 172095420 -78592434 + L1MB7 LINE L1 6112 6184 0 2048 104 4 11 chr2 172095425 172095704 -78592150 - AluSg SINE Alu -29 281 5 1918 95 8 4 chr2 172095708 172095960 -78591894 - AluSg SINE Alu -12 298 46 2258 106 27 0 chr2 172096844 172097145 -78590709 - AluSg SINE Alu -1 309 1 333 346 31 40 chr2 172097550 172097778 -78590076 + LTR16C LTR ERVL 266 491 0 21 0 0 0 chr2 172097920 172097941 -78589913 + AT_rich Low_complexity Low_complexity 1 21 0 431 268 63 7 chr2 172098032 172098174 -78589680 + MER102b DNA MER1_type 38 187 -154 2519 72 0 0 chr2 172098241 172098546 -78589308 + AluY SINE Alu 1 305 -6 723 235 0 0 chr2 172099228 172099360 -78588494 - MER94 DNA DNA 0 134 3 765 137 0 0 chr2 172100333 172100435 -78587419 + FLAM_C SINE Alu 2 103 -40 2025 125 4 0 chr2 172100488 172100768 -78587086 + AluSx SINE Alu 20 300 -12 2567 206 70 54 chr2 172100773 172101621 -78586233 + L1ME1 LINE L1 5339 6130 -36 1791 123 16 0 chr2 172101621 172101872 -78585982 + AluSx SINE Alu 36 290 -22 2567 206 70 54 chr2 172101872 172101904 -78585950 + L1ME1 LINE L1 6130 6160 -6 256 280 128 46 chr2 172102676 172102894 -78584960 + L1MC4a LINE L1 6680 6915 -893 * 3010 214 30 24 chr2 172102891 172103615 -78584239 + L1ME2 LINE L1 5435 6163 -1 666 234 35 35 chr2 172104333 172104534 -78583320 + MIR SINE MIR 59 259 -3 460 205 19 83 chr2 172105135 172105291 -78582563 + MER102b DNA MER1_type 181 326 -15 404 333 56 33 chr2 172107414 172107594 -78580260 + MIR3 SINE MIR 15 198 -10 261 57 0 0 chr2 172109832 172109867 -78577987 + (CAAAA)n Simple_repeat Simple_repeat 4 38 0 1685 136 7 78 chr2 172110372 172110680 -78577174 - AluJb SINE Alu -26 286 1 1787 169 10 7 chr2 172112407 172112708 -78575146 - AluJo SINE Alu -10 302 1 603 313 91 24 chr2 172112718 172113057 -78574797 - L2 LINE L2 -6 3307 2946 577 283 225 36 chr2 172113108 172113809 -78574045 - L2 LINE L2 -508 2806 1973 282 321 221 0 chr2 172114585 172114716 -78573138 - MIR SINE MIR -12 250 91 876 164 0 22 chr2 172114735 172114869 -78572985 - FLAM_C SINE Alu -2 131 1 348 356 62 7 chr2 172115392 172115538 -78572316 - L2 LINE L2 -8 3264 3111 2237 116 3 0 chr2 172115713 172116015 -78571839 + AluSx SINE Alu 1 303 -9 2085 148 0 0 chr2 172116154 172116459 -78571395 - AluJb SINE Alu -7 305 1 685 173 0 58 chr2 172117146 172117285 -78570569 + MER2 DNA MER2_type 2 132 -213 551 153 12 0 chr2 172117283 172117368 -78570486 + MER2 DNA MER2_type 260 345 0 * 1546 159 4 0 chr2 172117922 172118174 -78569680 + AluJo SINE Alu 54 306 -6 864 185 0 0 chr2 172118243 172118378 -78569476 + AluJb SINE Alu 158 292 -20 292 228 259 25 chr2 172118425 172118587 -78569267 + L2 LINE L2 3108 3307 -6 193 306 165 25 chr2 172119622 172119743 -78568111 - MIR SINE MIR 0 262 125 1007 120 0 32 chr2 172120369 172120437 -78567417 - Tigger2 DNA MER2_type -2 2716 2647 1921 110 12 118 chr2 172120437 172120783 -78567071 - AluSx SINE Alu -3 309 1 1007 120 0 32 chr2 172120783 172120872 -78566982 - Tigger2 DNA MER2_type -71 2647 2564 * 1122 116 50 5 chr2 172120869 172121067 -78566787 - Tigger2 DNA MER2_type -2510 208 2 225 179 90 13 chr2 172121173 172121251 -78566603 + L1M LINE L1 5255 5338 -904 386 315 50 15 chr2 172121572 172121772 -78566082 + L1MC4 LINE L1 6765 6971 -1071 914 150 0 0 chr2 172122030 172122163 -78565691 + AluJo SINE Alu 3 135 -177 430 320 41 22 chr2 172122175 172122407 -78565447 + L1MC4a LINE L1 5861 6104 -1704 1764 149 34 17 chr2 172122407 172122703 -78565151 + AluSx SINE Alu 1 301 -11 430 320 41 22 chr2 172122703 172122836 -78565018 + L1MC4a LINE L1 6104 6233 -1575 2455 82 0 7 chr2 172122973 172123278 -78564576 - AluSx SINE Alu -9 303 1 322 241 95 0 chr2 172123422 172123541 -78564313 + L1MC4a LINE L1 6565 6745 -1124 1773 199 69 14 chr2 172123542 172123979 -78563875 + MLT1C LTR MaLR 1 461 -6 391 254 72 98 chr2 172124027 172124487 -78563367 + L1MC4 LINE L1 6776 7223 -738 414 157 34 0 chr2 172124499 172124588 -78563266 + L1ME1 LINE L1 5711 5802 -319 258 212 8 114 chr2 172124833 172124939 -78562915 - L1MC4a LINE L1 -1882 5926 5835 2084 130 23 0 chr2 172124939 172125240 -78562614 - AluSx SINE Alu -2 310 3 258 212 8 114 chr2 172125240 172125265 -78562589 - L1MC4a LINE L1 -1973 5835 5809 583 285 80 37 chr2 172125395 172126081 -78561773 - L1MC4a LINE L1 -812 5334 5023 1305 206 27 24 chr2 172126201 172126536 -78561318 + L1ME1 LINE L1 5824 6159 -7 2135 92 65 3 chr2 172126736 172127029 -78560825 - AluSx SINE Alu -1 311 1 252 289 26 0 chr2 172127236 172127351 -78560503 - MIR SINE MIR -1 207 92 1842 161 0 17 chr2 172127356 172127676 -78560178 + AluJb SINE Alu 1 315 0 2376 98 0 0 chr2 172127850 172128147 -78559707 - AluSg SINE Alu -11 299 3 22 0 0 0 chr2 172128377 172128399 -78559455 + AT_rich Low_complexity Low_complexity 1 22 0 353 311 142 16 chr2 172128445 172128635 -78559219 - L1MC4a LINE L1 -1927 4219 4006 331 340 20 27 chr2 172128698 172128848 -78559006 - L1MC4a LINE L1 -2240 3906 3758 2276 99 7 13 chr2 172128861 172129164 -78558690 - AluSp SINE Alu -12 301 1 387 259 43 26 chr2 172129370 172129486 -78558368 - MIR3 SINE MIR -3 205 88 7226 150 10 34 chr2 172131117 172133217 -78554637 + L1PA12 LINE L1 4058 6168 0 1880 149 50 0 chr2 172133296 172133577 -78554277 - AluSx SINE Alu -17 295 1 2393 85 0 0 chr2 172133608 172133903 -78553951 + AluY SINE Alu 1 295 -16 930 161 0 13 chr2 172133996 172134145 -78553709 - FRAM SINE Alu -6 170 24 1614 166 14 35 chr2 172135438 172135728 -78552126 + AluJo SINE Alu 11 294 -18 1768 101 86 4 chr2 172136339 172136621 -78551233 + AluSc SINE Alu 1 303 0 854 244 52 0 chr2 172137211 172137424 -78550430 + MIR SINE MIR 2 225 -37 24 0 0 0 chr2 172137779 172137803 -78550051 + AT_rich Low_complexity Low_complexity 1 24 0 2260 107 0 0 chr2 172137803 172138122 -78549732 - L1PB1 LINE L1 -3 6148 5830 31 58 0 0 chr2 172138372 172138424 -78549430 + AT_rich Low_complexity Low_complexity 1 52 0 2050 141 3 0 chr2 172138884 172139188 -78548666 + AluSx SINE Alu 1 305 -7 29 28 0 0 chr2 172139739 172139775 -78548079 + AT_rich Low_complexity Low_complexity 1 36 0 1029 153 0 0 chr2 172139901 172140051 -78547803 + AluJb SINE Alu 142 291 -21 717 217 0 0 chr2 172140394 172140523 -78547331 + FLAM_C SINE Alu 5 133 0 2238 95 13 10 chr2 172140530 172140835 -78547019 + AluSg SINE Alu 1 306 -4 2446 77 0 0 chr2 172141629 172141926 -78545928 - AluSg SINE Alu -13 297 1 2038 156 0 0 chr2 172142209 172142498 -78545356 + AluJb SINE Alu 1 289 -23 29 47 0 0 chr2 172142498 172142541 -78545313 + AT_rich Low_complexity Low_complexity 1 43 0 2162 99 14 3 chr2 172142767 172143059 -78544795 + AluSq SINE Alu 1 295 -18 1992 107 120 12 chr2 172143549 172143875 -78543979 - MER46B DNA MER2_type 0 236 1 23 0 0 0 chr2 172144166 172144189 -78543665 + AT_rich Low_complexity Low_complexity 1 23 0 225 250 56 37 chr2 172144831 172144939 -78542915 - L1ME4a LINE L1 -61 6060 5951 239 267 0 0 chr2 172145157 172145217 -78542637 - L1ME4a LINE L1 -536 5585 5526 1751 188 17 0 chr2 172145295 172145593 -78542261 - AluJb SINE Alu -8 304 2 2413 86 0 22 chr2 172145600 172145915 -78541939 - AluSg SINE Alu -2 308 1 3239 266 33 13 chr2 172146275 172147210 -78540644 + L1M4b LINE L1 4 957 -5902 821 226 46 17 chr2 172147223 172147462 -78540392 + L1MCa LINE L1 161 406 -6158 * 1133 171 18 94 chr2 172147451 172147612 -78540242 + L1MCa LINE L1 778 903 -5142 1728 168 7 0 chr2 172147612 172147898 -78539956 - AluJb SINE Alu -24 288 1 1133 171 18 94 chr2 172147898 172148064 -78539790 + L1MCa LINE L1 903 1080 -4965 866 211 0 12 chr2 172148064 172148225 -78539629 + FAM SINE Alu 1 159 -16 1902 134 24 20 chr2 172148247 172148545 -78539309 - AluSx SINE Alu -13 299 1 1346 195 44 36 chr2 172148581 172149171 -78538683 + L1MCa LINE L1 1075 1734 -4830 1218 169 73 42 chr2 172149173 172149433 -78538421 + AluJo SINE Alu 11 278 -34 3933 226 72 10 chr2 172149451 172150697 -78537157 + L1MCa LINE L1 2672 3995 -2569 3493 194 60 18 chr2 172150693 172151118 -78536736 + L1MB8 LINE L1 4745 5151 -1027 * 2361 84 3 0 chr2 172151118 172151417 -78536437 + AluSp SINE Alu 1 300 -13 3493 194 60 18 chr2 172151417 172152380 -78535474 + L1MB8 LINE L1 5151 6178 0 254 206 15 0 chr2 172152460 172152528 -78535326 + L1MC4 LINE L1 7925 7993 -49 29 47 0 0 chr2 172153435 172153478 -78534376 + GC_rich Low_complexity Low_complexity 1 43 0 309 326 73 56 chr2 172153590 172153878 -78533976 - L1M2 LINE L1 -5885 964 672 3464 133 36 10 chr2 172154834 172155422 -78532432 + MER6A DNA MER2_type 1 603 -2 3150 195 87 73 chr2 172155968 172156659 -78531195 - LTR28 LTR ERV1 -20 1735 1055 2980 112 99 0 chr2 172156659 172157115 -78530739 - MER61D LTR ERV1 0 501 1 3150 195 87 73 chr2 172157115 172157515 -78530339 - LTR28 LTR ERV1 -700 1055 1 1145 96 42 0 chr2 172157643 172157810 -78530044 - L1PA7 LINE L1 0 6154 5981 2217 118 0 0 chr2 172157811 172158116 -78529738 - AluSx SINE Alu -7 305 1 2378 89 0 10 chr2 172158130 172158434 -78529420 - AluSq SINE Alu -12 301 1 278 348 209 35 chr2 172159235 172159632 -78528222 + L2 LINE L2 2807 3272 0 516 188 69 104 chr2 172159685 172159829 -78528025 - FLAM_A SINE Alu -3 139 1 1119 301 106 17 chr2 172160285 172161057 -78526797 - L2 LINE L2 -2 3311 2463 234 273 385 0 chr2 172161211 172161416 -78526438 - L2 LINE L2 -431 2883 2600 334 251 104 50 chr2 172161813 172162009 -78525845 - L1ME3A LINE L1 -222 5931 5716 2275 121 0 0 chr2 172162009 172162315 -78525539 - AluSg SINE Alu -4 306 1 334 251 104 50 chr2 172162315 172162377 -78525477 - L1ME3A LINE L1 -437 5716 5659 1511 223 79 4 chr2 172162391 172162882 -78524972 - MLT1E1 LTR MaLR 0 654 1 2427 280 49 26 chr2 172162887 172162942 -78524912 - L1ME3A LINE L1 -505 5642 5590 3022 64 0 5 chr2 172162942 172163319 -78524535 - THE1C LTR MaLR 0 375 1 10597 97 34 36 chr2 172163319 172164903 -78522951 - THE1C-int LTR MaLR 0 1580 1 2593 107 13 8 chr2 172164903 172165276 -78522578 - THE1C LTR MaLR 0 375 1 2427 280 49 26 chr2 172165276 172166328 -78521526 - L1ME3A LINE L1 -557 5590 4564 1374 189 4 0 chr2 172166328 172166561 -78521293 + MER8 DNA MER2_type 2 235 -4 2427 280 49 26 chr2 172166561 172166694 -78521160 - L1ME3A LINE L1 -1583 4564 4436 237 108 0 0 chr2 172166694 172166731 -78521123 + (TG)n Simple_repeat Simple_repeat 2 38 0 938 181 24 0 chr2 172166732 172166898 -78520956 - FAM SINE Alu -5 170 1 2427 280 49 26 chr2 172166898 172167470 -78520384 - L1ME3A LINE L1 -1710 4437 3803 344 294 23 68 chr2 172167551 172167728 -78520126 - L1ME3A LINE L1 -5949 170 2 254 344 62 10 chr2 172167868 172167964 -78519890 + MIR3 SINE MIR 6 106 -102 1098 96 0 0 chr2 172167988 172168123 -78519731 - AluJb SINE Alu -177 135 1 4092 155 66 106 chr2 172168282 172169155 -78518699 + L1MC3 LINE L1 5979 6885 -900 268 53 0 0 chr2 172169155 172169193 -78518661 - AluJb SINE Alu -5 297 260 4092 155 66 106 chr2 172169193 172169255 -78518599 + L1MC3 LINE L1 6885 6948 -837 1720 148 0 26 chr2 172169255 172169526 -78518328 - AluJb SINE Alu -48 264 1 4092 155 66 106 chr2 172169526 172169717 -78518137 + L1MC3 LINE L1 6948 7097 -688 282 311 0 0 chr2 172169717 172169807 -78518047 + MLT1L LTR MaLR 35 124 -443 1496 171 48 20 chr2 172169851 172169949 -78517905 + L1MC3 LINE L1 7424 7518 -267 2383 79 0 0 chr2 172169949 172170240 -78517614 + AluY SINE Alu 1 291 -20 1496 171 48 20 chr2 172170240 172170492 -78517362 + L1MC3 LINE L1 7518 7784 -1 644 242 109 93 chr2 172170527 172170775 -78517079 + MIR SINE MIR 1 252 -10 228 274 215 22 chr2 172171335 172171470 -78516384 + MIR SINE MIR 6 166 -96 27 29 0 0 chr2 172172472 172172506 -78515348 + AT_rich Low_complexity Low_complexity 1 34 0 2346 90 7 0 chr2 172172542 172172842 -78515012 + AluSg1 SINE Alu 1 302 -7 2258 119 31 31 chr2 172173058 172173418 -78514436 - THE1B LTR MaLR -4 360 1 1826 181 0 3 chr2 172173448 172173747 -78514107 - AluJb SINE Alu -14 298 1 2312 98 3 0 chr2 172173759 172174056 -78513798 - AluSp SINE Alu -15 298 1 261 303 116 21 chr2 172174065 172174349 -78513505 - L1MC/D LINE L1 -1992 5816 5506 3565 158 58 72 chr2 172174458 172175380 -78512474 - Charlie1a DNA MER1_type 0 1455 547 1091 226 10 48 chr2 172175407 172175717 -78512137 - Charlie1a DNA MER1_type -1152 303 6 1174 252 65 24 chr2 172175730 172176147 -78511707 + MLT1L LTR MaLR 174 607 -8 253 255 83 0 chr2 172176157 172176288 -78511566 - L1MC/D LINE L1 -772 5411 5269 495 303 57 57 chr2 172176326 172176709 -78511145 - L1MC/D LINE L1 -962 5184 4802 372 295 15 23 chr2 172176879 172177140 -78510714 - L1MC/D LINE L1 -1489 4657 4399 366 267 81 19 chr2 172177495 172177656 -78510198 + MARNA DNA Mariner 354 524 -62 249 313 104 12 chr2 172177535 172177698 -78510156 - MARNA DNA Mariner -394 192 15 * 954 178 130 17 chr2 172178234 172178465 -78509389 + MER76 LTR ERV 1 257 -431 496 284 74 33 chr2 172178477 172178748 -78509106 + MER76 LTR ERV 373 654 -34 23 0 0 0 chr2 172178775 172178798 -78509056 + AT_rich Low_complexity Low_complexity 1 23 0 181 308 26 51 chr2 172178994 172179072 -78508782 + MIR SINE MIR 20 95 -167 338 305 136 0 chr2 172179274 172179428 -78508426 - MIR SINE MIR -10 252 78 2324 96 10 0 chr2 172179600 172179903 -78507951 + AluSp SINE Alu 1 306 -7 591 156 128 0 chr2 172180855 172180964 -78506890 - FRAM SINE Alu -25 151 29 284 210 99 0 chr2 172181231 172181312 -78506542 - MLT1L LTR MaLR -2 613 525 1552 157 110 39 chr2 172181470 172181834 -78506020 + MLT1B LTR MaLR 1 390 0 343 258 10 21 chr2 172181973 172182070 -78505784 - MLT1K LTR MaLR -353 235 140 346 287 87 97 chr2 172182940 172183261 -78504593 + L2 LINE L2 2228 2545 -769 251 287 75 21 chr2 172183369 172183463 -78504391 - MER5B DNA MER1_type -1 177 79 3392 148 79 18 chr2 172183537 172184091 -78503763 + MER44D DNA MER2_type 6 608 -1979 432 0 0 0 chr2 172184091 172184139 -78503715 + (TA)n Simple_repeat Simple_repeat 2 49 0 3392 148 79 18 chr2 172184139 172184244 -78503610 + MER44D DNA MER2_type 608 705 0 6477 146 86 63 chr2 172184445 172185028 -78502826 - L1MC3 LINE L1 -10 7775 7207 286 236 56 0 chr2 172185028 172185100 -78502754 - MLT1K LTR MaLR -456 111 36 6477 146 86 63 chr2 172185100 172185928 -78501926 - L1MC3 LINE L1 -578 7207 6259 315 375 48 65 chr2 172185935 172186271 -78501583 + L2 LINE L2 2891 3220 -52 357 237 133 15 chr2 172186285 172186420 -78501434 - MLT1L LTR MaLR -29 586 436 412 311 105 34 chr2 172187927 172188136 -78499718 + MIR SINE MIR 21 244 -18 893 146 0 0 chr2 172188205 172188335 -78499519 - FLAM_C SINE Alu -3 130 1 293 115 0 0 chr2 172189276 172189328 -78498526 - L1MB3 LINE L1 -113 6070 6019 3038 150 10 69 chr2 172189365 172190261 -78497593 - L1MB3 LINE L1 -37 6275 5451 1605 224 30 68 chr2 172190274 172190618 -78497236 - L1MEc LINE L1 -2647 3568 3212 1404 175 0 117 chr2 172190618 172190960 -78496894 - AluJo SINE Alu 0 302 1 1605 224 30 68 chr2 172190960 172191070 -78496784 - L1MEc LINE L1 -3003 3212 3099 1304 204 118 0 chr2 172191070 172191340 -78496514 + AluSx SINE Alu 1 302 -10 1605 224 30 68 chr2 172191340 172191590 -78496264 - L1MEc LINE L1 -3116 3099 2890 388 247 61 52 chr2 172191597 172191828 -78496026 + L1M4 LINE L1 2197 2429 -3717 2074 204 52 51 chr2 172191835 172191889 -78495965 - L1MEc LINE L1 -3334 2881 2829 1954 99 52 15 chr2 172191889 172192202 -78495652 - AluSx SINE Alu 0 323 1 2074 204 52 51 chr2 172192202 172192940 -78494914 - L1MEc LINE L1 -3386 2829 2135 25 31 0 0 chr2 172193446 172193478 -78494376 + AT_rich Low_complexity Low_complexity 1 32 0 1550 199 80 0 chr2 172194766 172195053 -78492801 - AluJb SINE Alu -2 310 1 2023 131 6 29 chr2 172195064 172195376 -78492478 - AluSx SINE Alu -6 306 2 15463 105 20 42 chr2 172196785 172198649 -78489205 - Tigger1 DNA MER2_type 0 2418 622 2029 144 23 0 chr2 172198649 172198954 -78488900 - AluJb SINE Alu 0 312 1 15463 105 20 42 chr2 172198954 172199563 -78488291 - Tigger1 DNA MER2_type -1796 622 1 185 344 33 0 chr2 172199578 172199639 -78488215 + L2 LINE L2 3209 3271 -1 226 340 141 33 chr2 172199981 172200287 -78487567 - L2 LINE L2 -784 2530 2192 601 178 124 45 chr2 172200401 172200603 -78487251 + MER33 DNA MER1_type 1 218 -106 21 0 0 0 chr2 172200617 172200638 -78487216 + AT_rich Low_complexity Low_complexity 1 21 0 1074 119 0 31 chr2 172200638 172200798 -78487056 - AluSx SINE Alu -11 301 147 3852 136 95 18 chr2 172200798 172201527 -78486327 - LTR1 LTR ERV1 0 785 1 1106 119 0 0 chr2 172201559 172201710 -78486144 - AluSx SINE Alu -162 151 1 523 164 9 9 chr2 172201710 172201826 -78486028 + MER33 DNA MER1_type 244 359 -4 210 376 0 10 chr2 172202169 172202270 -78485584 + MER5A DNA MER1_type 90 189 0 467 145 0 0 chr2 172202841 172202910 -78484944 - AluJ/FRAM SINE Alu -16 296 228 859 136 0 15 chr2 172202929 172203061 -78484793 - FLAM_C SINE Alu -3 130 1 24 32 0 0 chr2 172203195 172203226 -78484628 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 172203340 172203361 -78484493 + AT_rich Low_complexity Low_complexity 1 21 0 1800 167 0 7 chr2 172203361 172203636 -78484218 - AluJo SINE Alu -31 281 9 1828 134 7 14 chr2 172203657 172203968 -78483886 - AluJb SINE Alu 0 309 1 1928 161 29 3 chr2 172203968 172204353 -78483501 - L1MB5 LINE L1 -234 5940 5546 468 206 58 111 chr2 172204615 172204858 -78482996 + MER112 DNA MER1_type 30 259 -1 2274 98 0 16 chr2 172205085 172205401 -78482453 - AluSx SINE Alu -1 311 1 205 186 0 0 chr2 172205411 172205454 -78482400 + T-rich Low_complexity Low_complexity 1 43 0 20645 118 13 15 chr2 172205455 172206110 -78481744 - L1PA8 LINE L1 0 6172 5517 2409 86 0 7 chr2 172206110 172206411 -78481443 + AluSc SINE Alu 1 299 -10 20645 118 13 15 chr2 172206411 172209533 -78478321 - L1PA8 LINE L1 -655 5517 2389 2362 108 3 0 chr2 172209533 172209840 -78478014 - AluSg SINE Alu -2 308 1 20645 118 13 15 chr2 172209840 172210254 -78477600 - L1PA8 LINE L1 -3783 2389 3569 216 0 0 0 chr2 172210254 172210278 -78477576 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 20645 118 13 15 chr2 172210278 172211822 -78476032 - L1PA8 LINE L1 -2602 3570 2024 546 220 7 14 chr2 172212338 172212479 -78475375 - L1ME1 LINE L1 -224 5942 5803 1557 180 25 9 chr2 172212494 172212817 -78475037 + L1MC4a LINE L1 5262 5589 -577 956 206 48 67 chr2 172213375 172213705 -78474149 + L1ME1 LINE L1 5839 6162 -4 357 260 20 13 chr2 172213718 172213868 -78473986 + L1MC4a LINE L1 5780 5930 -1878 8287 46 5 0 chr2 172213879 172215712 -78472142 + L1PA5 LINE L1 4291 6158 0 224 307 13 13 chr2 172216010 172216085 -78471769 + L2 LINE L2 3188 3262 -10 1138 153 13 61 chr2 172216204 172216321 -78471533 + AluJo SINE Alu 6 108 -204 417 39 0 0 chr2 172216321 172216372 -78471482 + (TAA)n Simple_repeat Simple_repeat 2 52 0 1138 153 13 61 chr2 172216372 172216482 -78471372 + AluJo SINE Alu 108 222 -90 2097 130 0 34 chr2 172216535 172216858 -78470996 + AluSx SINE Alu 1 312 0 327 226 138 25 chr2 172217011 172217170 -78470684 + MER104 DNA MER2_type 1 177 -3 355 289 67 15 chr2 172217205 172217340 -78470514 - L1ME3A LINE L1 -52 6118 5977 2394 60 0 0 chr2 172217377 172217682 -78470172 - AluY SINE Alu 0 305 1 322 222 91 91 chr2 172218006 172218113 -78469741 - L1MEc LINE L1 -4001 2214 2105 2350 99 0 0 chr2 172218113 172218406 -78469448 - AluSg SINE Alu -17 293 1 322 222 91 91 chr2 172218406 172218496 -78469358 - L1MEc LINE L1 -4109 2106 2017 5266 167 75 51 chr2 172218503 172218862 -78468992 - Charlie1a DNA MER1_type -1313 1448 1099 2325 85 0 3 chr2 172218862 172219168 -78468686 - AluY SINE Alu -6 305 1 5266 167 75 51 chr2 172219168 172219314 -78468540 - Charlie1a DNA MER1_type -1662 1099 958 673 180 8 0 chr2 172219314 172219436 -78468418 - FLAM_A SINE Alu -10 123 1 5266 167 75 51 chr2 172219436 172220298 -78467556 - Charlie1a DNA MER1_type -1803 958 47 1584 275 66 34 chr2 172220320 172221276 -78466578 - L1MEc LINE L1 -4331 2065 1079 1021 165 32 0 chr2 172221283 172221441 -78466413 - AluJb SINE Alu -10 302 140 955 259 102 56 chr2 172221446 172222496 -78465358 - L1MEc LINE L1 -5160 1045 18 4457 84 5 2 chr2 172222574 172223159 -78464695 - LTR14C LTR ERVK 0 587 1 307 217 87 101 chr2 172224034 172224077 -78463777 - L1ME3A LINE L1 -181 5940 5898 2344 87 0 7 chr2 172224077 172224375 -78463479 + AluSx SINE Alu 1 296 -16 207 0 0 0 chr2 172224376 172224399 -78463455 + (TA)n Simple_repeat Simple_repeat 1 23 0 307 217 87 101 chr2 172224399 172224698 -78463156 - L1ME3A LINE L1 -222 5899 5601 335 21 43 0 chr2 172225589 172225636 -78462218 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 204 371 71 16 chr2 172225763 172226016 -78461838 + L2 LINE L2 2399 2665 -649 674 294 69 9 chr2 172226429 172226647 -78461207 + MIR SINE MIR 6 236 -26 1999 82 82 4 chr2 172228302 172228572 -78459282 + AluSc SINE Alu 1 291 -18 2619 109 2 12 chr2 172228580 172229000 -78458854 - L1M1 LINE L1 -560 5740 5325 615 182 61 15 chr2 172229001 172229133 -78458721 - AluJb SINE Alu -13 299 162 286 137 20 0 chr2 172229133 172229184 -78458670 - Alu SINE Alu -250 52 1 6069 155 12 30 chr2 172229184 172229814 -78458040 - L1M1 LINE L1 -817 5329 4689 2273 120 3 0 chr2 172229814 172230123 -78457731 - AluSq SINE Alu -3 310 1 6069 155 12 30 chr2 172230123 172230195 -78457659 - L1M1 LINE L1 -1457 4689 4617 1972 169 0 7 chr2 172230195 172230503 -78457351 + AluJo SINE Alu 1 306 -6 6069 155 12 30 chr2 172230503 172230933 -78456921 - L1M1 LINE L1 -1529 4617 4220 2030 134 0 23 chr2 172230933 172231239 -78456615 + AluSx SINE Alu 1 299 -13 6069 155 12 30 chr2 172231239 172231387 -78456467 - L1M1 LINE L1 -1926 4220 4071 1984 138 51 24 chr2 172231385 172231753 -78456101 + L1MA4 LINE L1 5755 6137 -163 * 1929 126 50 0 chr2 172231753 172232030 -78455824 + AluSx SINE Alu 1 291 -21 1984 138 51 24 chr2 172232030 172232074 -78455780 + L1MA4 LINE L1 6137 6178 -122 39820 65 4 3 chr2 172232085 172238339 -78449515 + L1PA5 LINE L1 11 6154 0 2973 139 15 4 chr2 172238351 172238870 -78448984 + L1MB2 LINE L1 5479 6003 -168 772 180 0 12 chr2 172239037 172239204 -78448650 + L1MB2 LINE L1 6000 6164 -7 536 175 8 175 chr2 172239388 172239640 -78448214 - L1ME3A LINE L1 -20 6150 5941 1114 185 31 22 chr2 172239711 172239933 -78447921 + MER58A DNA MER1_type 1 224 0 2070 144 10 0 chr2 172241865 172242170 -78445684 + AluJb SINE Alu 1 308 -4 675 293 59 28 chr2 172243809 172244062 -78443792 + MIR SINE MIR 2 262 0 254 183 49 85 chr2 172244418 172244500 -78443354 - MIR3 SINE MIR -12 196 118 2085 110 3 0 chr2 172244709 172245034 -78442820 - AluSp SINE Alu 0 326 1 287 263 19 6 chr2 172245043 172245168 -78442686 - L1ME3A LINE L1 -299 5822 5696 742 147 16 23 chr2 172245170 172245299 -78442555 - FLAM_C SINE Alu -5 128 1 23 33 0 0 chr2 172246143 172246173 -78441681 + AT_rich Low_complexity Low_complexity 1 30 0 250 275 24 66 chr2 172246241 172246323 -78441531 - L1MC4a LINE L1 -1764 6044 5960 306 0 0 0 chr2 172246323 172246357 -78441497 + (TG)n Simple_repeat Simple_repeat 2 35 0 250 275 24 66 chr2 172246357 172246485 -78441369 - L1MC4a LINE L1 -1848 5960 5843 1051 99 0 0 chr2 172246654 172246785 -78441069 + AluSq/x SINE Alu 2 132 -180 2503 64 0 0 chr2 172246849 172247144 -78440710 - AluSg SINE Alu -15 295 1 224 316 114 0 chr2 172247412 172247526 -78440328 + MIR3 SINE MIR 81 207 -1 2037 136 13 0 chr2 172247670 172247971 -78439883 - AluSx SINE Alu -7 305 1 2357 87 7 3 chr2 172247975 172248273 -78439581 - AluSq SINE Alu -12 301 3 26 74 0 0 chr2 172248490 172248544 -78439310 + AT_rich Low_complexity Low_complexity 1 54 0 2328 107 0 7 chr2 172249526 172249836 -78438018 - AluSq SINE Alu -5 308 1 394 285 32 16 chr2 172249855 172250041 -78437813 - L1ME4a LINE L1 -210 5911 5723 400 253 114 30 chr2 172250095 172250392 -78437462 - L1ME4a LINE L1 -487 5634 5313 2106 119 13 3 chr2 172251025 172251328 -78436526 + AluSq SINE Alu 1 306 -7 1945 36 0 0 chr2 172251575 172251795 -78436059 + AluY SINE Alu 85 304 -7 2313 85 3 3 chr2 172251797 172252090 -78435764 + AluSg SINE Alu 1 293 -17 2341 89 0 7 chr2 172252467 172252759 -78435095 + AluSx SINE Alu 1 290 -22 303 239 141 0 chr2 172252761 172252853 -78435001 - L1MC5 LINE L1 -36 7925 7821 351 0 0 0 chr2 172254081 172254120 -78433734 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 186 189 0 0 chr2 172254170 172254207 -78433647 + (TAA)n Simple_repeat Simple_repeat 1 37 0 942 254 41 12 chr2 172254210 172254454 -78433400 - MIR SINE MIR 0 262 12 2400 90 3 10 chr2 172254794 172255106 -78432748 + AluSq SINE Alu 1 310 -3 1066 153 0 25 chr2 172255739 172255902 -78431952 + AluJb SINE Alu 133 291 -21 1831 188 0 0 chr2 172256006 172256304 -78431550 + AluJo SINE Alu 1 298 -14 2178 103 10 0 chr2 172256475 172256767 -78431087 + AluSx SINE Alu 1 295 -17 2332 92 0 0 chr2 172256784 172257079 -78430775 + AluSc SINE Alu 2 296 -13 23 0 0 0 chr2 172257418 172257441 -78430413 + AT_rich Low_complexity Low_complexity 1 23 0 1968 126 20 36 chr2 172258901 172259203 -78428651 + AluSx SINE Alu 1 297 -15 2055 116 16 19 chr2 172259203 172259514 -78428340 + AluSx SINE Alu 1 310 -2 1137 133 0 12 chr2 172259514 172259679 -78428175 + AluSg/x SINE Alu 132 294 -16 336 250 97 17 chr2 172260720 172260896 -78426958 - MER117 DNA MER1_type -7 190 1 1313 212 24 31 chr2 172262703 172262995 -78424859 + AluJo SINE Alu 1 290 -22 1623 121 4 66 chr2 172263044 172263316 -78424538 - AluSx SINE Alu -4 308 54 717 115 0 0 chr2 172263316 172263412 -78424442 - AluS SINE Alu -216 96 1 1994 166 0 0 chr2 172264658 172264965 -78422889 + AluJb SINE Alu 1 307 -5 3710 92 30 7 chr2 172264989 172265421 -78422433 + MER41A LTR ERV1 1 449 -105 2471 73 0 25 chr2 172265421 172265737 -78422117 - AluY SINE Alu -3 308 1 3710 92 30 7 chr2 172265737 172265846 -78422008 + MER41A LTR ERV1 449 554 0 2167 90 3 13 chr2 172265929 172266229 -78421625 + AluSg SINE Alu 1 297 -13 1098 153 0 6 chr2 172266729 172266899 -78420955 + AluSc SINE Alu 89 257 -52 392 267 164 7 chr2 172269200 172269346 -78418508 - MIR SINE MIR -71 191 23 185 343 15 0 chr2 172269432 172269499 -78418355 + L3 LINE CR1 1508 1575 -2 2236 95 13 7 chr2 172272765 172273071 -78414783 + AluSq SINE Alu 1 308 -5 2258 170 103 16 chr2 172273547 172273656 -78414198 + LTR48 LTR ERV1 1 99 -545 2285 101 7 0 chr2 172273656 172273954 -78413900 + AluSp SINE Alu 1 300 -13 2258 170 103 16 chr2 172273954 172274404 -78413450 + LTR48 LTR ERV1 99 417 -227 339 73 0 0 chr2 172274404 172274445 -78413409 - THE1B LTR MaLR 0 364 324 470 213 0 0 chr2 172274445 172274525 -78413329 + AluS SINE Alu 2 81 -232 1874 72 0 0 chr2 172274525 172274746 -78413108 - AluSq SINE Alu -92 221 1 2383 88 3 3 chr2 172274759 172275064 -78412790 - AluSp SINE Alu -8 305 1 9989 95 36 1 chr2 172275064 172276414 -78411440 - THE1B-int LTR MaLR -177 1403 7 2561 124 22 0 chr2 172276420 172276776 -78411078 - THE1B LTR MaLR 0 364 1 901 127 76 40 chr2 172276776 172276985 -78410869 + LTR48 LTR ERV1 412 740 -30 2295 101 3 0 chr2 172277546 172277844 -78410010 + AluSq SINE Alu 3 301 -12 469 368 81 0 chr2 172278719 172278942 -78408912 + MIR SINE MIR 21 261 -1 328 30 60 15 chr2 172278950 172279017 -78408837 + (TA)n Simple_repeat Simple_repeat 2 71 0 2733 126 132 78 chr2 172279046 172279569 -78408285 + MLT2B3 LTR ERVL 3 553 -1 64 0 0 0 chr2 172279619 172279683 -78408171 + AT_rich Low_complexity Low_complexity 1 64 0 219 104 30 30 chr2 172279683 172279750 -78408104 + (TAAA)n Simple_repeat Simple_repeat 1 67 0 33 0 0 0 chr2 172279750 172279783 -78408071 + AT_rich Low_complexity Low_complexity 1 33 0 259 333 0 46 chr2 172279858 172279966 -78407888 - L2 LINE L2 -1 3312 3210 190 361 65 19 chr2 172279924 172280032 -78407822 + L3b LINE CR1 1402 1514 -69 * 5524 152 21 25 chr2 172280550 172281007 -78406847 + L1MB3 LINE L1 4818 5275 -908 1872 152 0 46 chr2 172281007 172281330 -78406524 + AluJo SINE Alu 3 310 -2 5524 152 21 25 chr2 172281330 172281783 -78406071 + L1MB3 LINE L1 5275 5728 -455 2109 135 90 40 chr2 172281783 172282160 -78405694 - MSTD LTR MaLR 0 396 1 5524 152 21 25 chr2 172282160 172282614 -78405240 + L1MB3 LINE L1 5728 6182 -1 2442 86 0 0 chr2 172282623 172282924 -78404930 + AluSg SINE Alu 1 301 -9 2410 91 0 0 chr2 172283031 172283340 -78404514 - AluSc SINE Alu 0 309 1 1922 168 0 10 chr2 172283755 172284064 -78403790 - AluJo SINE Alu -6 306 1 1201 161 138 28 chr2 172284382 172284673 -78403181 - MLT1A1 LTR MaLR -42 323 1 2248 100 0 0 chr2 172284700 172284989 -78402865 + AluSp SINE Alu 1 289 -24 203 0 37 0 chr2 172284992 172285019 -78402835 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2113 114 30 3 chr2 172285042 172285339 -78402515 + AluSg SINE Alu 1 305 -5 324 305 175 13 chr2 172285469 172285623 -78402231 + MER5A DNA MER1_type 7 185 -4 240 258 0 16 chr2 172285656 172285718 -78402136 - MER5B DNA MER1_type 0 178 118 1526 161 23 80 chr2 172285720 172286019 -78401835 + AluJo SINE Alu 1 282 -30 286 215 46 0 chr2 172286042 172286107 -78401747 - MER5B DNA MER1_type -54 124 57 214 245 57 0 chr2 172286171 172286224 -78401630 + MER5B DNA MER1_type 123 178 0 2035 114 19 32 chr2 172286810 172287126 -78400728 - AluSx SINE Alu 0 312 1 447 273 36 14 chr2 172287778 172287917 -78399937 + MIR3 SINE MIR 64 205 -3 764 290 73 13 chr2 172288106 172288670 -78399184 - L1ME4a LINE L1 -172 5949 5307 442 273 98 0 chr2 172288670 172288802 -78399052 + MIR SINE MIR 89 233 -29 2185 102 3 3 chr2 172289346 172289641 -78398213 - AluSc SINE Alu -14 295 1 405 0 0 0 chr2 172289694 172289739 -78398115 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 1720 180 0 0 chr2 172290836 172291142 -78396712 - AluJo SINE Alu 0 306 1 243 348 120 0 chr2 172291949 172292041 -78395813 + L2 LINE L2 3128 3230 -42 1454 177 9 84 chr2 172292043 172292179 -78395675 + MER33 DNA MER1_type 1 146 -2439 2010 146 7 3 chr2 172292179 172292474 -78395380 + AluSx SINE Alu 1 296 -16 2241 103 7 0 chr2 172292483 172292785 -78395069 + AluSx SINE Alu 1 304 -8 1454 177 9 84 chr2 172292785 172292983 -78394871 + MER33 DNA MER1_type 154 319 -5 654 238 113 13 chr2 172293011 172293242 -78394612 - LTR33 LTR ERVL -6 515 262 2293 122 0 0 chr2 172293656 172293960 -78393894 + AluSx SINE Alu 5 308 -4 443 273 45 119 chr2 172294463 172294774 -78393080 + L2 LINE L2 2932 3219 -94 545 246 115 26 chr2 172294785 172294976 -78392878 - MIR SINE MIR -25 237 30 2386 100 0 3 chr2 172295046 172295357 -78392497 - AluSg SINE Alu 0 310 1 584 246 151 0 chr2 172295360 172295539 -78392315 - MIR SINE MIR -8 254 49 2096 104 38 7 chr2 172295669 172295956 -78391898 + AluSx SINE Alu 1 296 -16 494 129 0 112 chr2 172296148 172296311 -78391543 + L1M4 LINE L1 2851 2987 -3159 1522 114 0 77 chr2 172296328 172296511 -78391343 - HSMAR2 DNA Mariner -1 1301 1106 2066 114 3 57 chr2 172296511 172296827 -78391027 - AluSx SINE Alu -13 299 1 1522 114 0 77 chr2 172296827 172296883 -78390971 - HSMAR2 DNA Mariner -196 1106 1083 1815 173 3 10 chr2 172296883 172297184 -78390670 - AluJo SINE Alu -13 299 1 1522 114 0 77 chr2 172297184 172297216 -78390638 - HSMAR2 DNA Mariner -219 1083 1050 801 119 9 0 chr2 172297223 172297332 -78390522 + FLAM_C SINE Alu 2 111 -32 1967 88 22 60 chr2 172297332 172297425 -78390429 - HSMAR2 DNA Mariner -994 308 213 2147 122 7 0 chr2 172297425 172297728 -78390126 - AluSx SINE Alu -7 305 1 1967 88 22 60 chr2 172297728 172297953 -78389901 - HSMAR2 DNA Mariner -1089 213 2 299 290 21 21 chr2 172298015 172298108 -78389746 - L2 LINE L2 -4 3268 3176 327 269 0 21 chr2 172298716 172298809 -78389045 + L2 LINE L2 3220 3310 -3 196 318 68 0 chr2 172298942 172299030 -78388824 + L2 LINE L2 3220 3313 0 207 114 0 0 chr2 172301319 172301354 -78386500 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 2409 92 20 0 chr2 172301458 172301764 -78386090 - AluSq SINE Alu -1 312 1 303 268 62 21 chr2 172302243 172302340 -78385514 + MIR SINE MIR 40 140 -68 375 217 283 0 chr2 172302437 172302543 -78385311 - L2 LINE L2 -1 3312 3177 * 404 239 85 15 chr2 172302541 172302671 -78385183 + MIR SINE MIR 75 213 -49 334 309 82 0 chr2 172302876 172302973 -78384881 - L2 LINE L2 -1 3312 3208 250 302 47 0 chr2 172303525 172303611 -78384243 - MIR SINE MIR -10 252 163 2290 98 0 0 chr2 172304321 172304616 -78383238 + AluSc SINE Alu 1 295 -14 2147 117 0 3 chr2 172304647 172304947 -78382907 + AluSx SINE Alu 1 299 -13 303 276 0 22 chr2 172304950 172305046 -78382808 + MIR SINE MIR 34 126 -82 771 227 116 23 chr2 172305422 172305557 -78382297 - MIR SINE MIR -1 261 97 1801 188 0 6 chr2 172305557 172305871 -78381983 + AluJb SINE Alu 1 312 0 771 227 116 23 chr2 172305871 172305951 -78381903 - MIR SINE MIR -165 97 26 23 0 0 0 chr2 172305985 172306008 -78381846 + AT_rich Low_complexity Low_complexity 1 23 0 333 267 99 0 chr2 172306011 172306142 -78381712 - L1ME4a LINE L1 0 6121 5978 595 219 6 12 chr2 172306199 172306363 -78381491 - L1ME4a LINE L1 -236 5885 5723 204 235 0 0 chr2 172306649 172306700 -78381154 + A-rich Low_complexity Low_complexity 1 51 0 196 293 23 45 chr2 172307007 172307140 -78380714 - L2 LINE L2 -95 3218 3089 1830 155 3 7 chr2 172307467 172307771 -78380083 - AluJb SINE Alu -5 307 5 1320 140 34 72 chr2 172308057 172308322 -78379532 - Tigger2 DNA MER2_type 0 2718 2464 4324 132 50 6 chr2 172308382 172309104 -78378750 - Tigger2 DNA MER2_type -1964 754 1 1702 254 65 36 chr2 172309108 172309743 -78378111 - L1MEc LINE L1 -4488 1908 1256 1698 157 79 23 chr2 172309751 172310094 -78377760 + MLT1B LTR MaLR 29 390 0 257 250 94 21 chr2 172310105 172310201 -78377653 - L1MEc LINE L1 -5142 1254 1152 360 117 31 239 chr2 172310758 172310921 -78376933 - L1MEc LINE L1 -5251 1145 1017 4087 84 16 14 chr2 172310931 172311502 -78376352 - L1MA3 LINE L1 0 6305 5734 241 132 38 0 chr2 172311520 172311573 -78376281 - L1MC2 LINE L1 -10 6334 6280 2303 94 7 0 chr2 172311573 172311872 -78375982 + AluSp SINE Alu 1 301 -12 1697 180 42 68 chr2 172311885 172312285 -78375569 + MLT1B LTR MaLR 1 390 0 1977 130 10 7 chr2 172312292 172312585 -78375269 + AluJo SINE Alu 1 294 -18 565 147 95 17 chr2 172312589 172312705 -78375149 - L1M3 LINE L1 -491 5692 5568 402 343 41 30 chr2 172312757 172312926 -78374928 + MIR3 SINE MIR 38 208 0 199 255 0 0 chr2 172313271 172313318 -78374536 + MIR SINE MIR 107 153 -109 451 165 13 0 chr2 172313443 172313522 -78374332 + L1MC4 LINE L1 7949 8028 -14 1044 181 42 23 chr2 172313526 172313741 -78374113 + L1PA16 LINE L1 5940 6158 -8 2027 137 3 16 chr2 172313815 172314129 -78373725 + AluJo SINE Alu 1 310 -2 948 210 6 11 chr2 172314160 172314336 -78373518 + FAM SINE Alu 1 175 0 2492 62 0 10 chr2 172315268 172315573 -78372281 + AluY SINE Alu 6 307 -4 207 286 0 0 chr2 172316383 172316446 -78371408 + A-rich Low_complexity Low_complexity 1 63 0 543 43 0 0 chr2 172317233 172317303 -78370551 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 636 261 241 27 chr2 172317309 172317916 -78369938 - L2 LINE L2 -8 3305 2586 2450 146 23 48 chr2 172317931 172318370 -78369484 + MSTA LTR MaLR 1 428 0 423 285 42 20 chr2 172318370 172318550 -78369304 + MLT1G3 LTR MaLR 42 234 -321 491 170 19 0 chr2 172318556 172318632 -78369222 + AluS SINE Alu 2 77 -236 2397 100 3 0 chr2 172318632 172318941 -78368913 - AluSq SINE Alu -3 310 1 1537 131 4 4 chr2 172318941 172319170 -78368684 + AluSg SINE Alu 64 292 -18 897 170 6 38 chr2 172319183 172319342 -78368512 + FRAM SINE Alu 1 154 -12 1006 234 158 5 chr2 172319344 172319653 -78368201 + MLT1G3 LTR MaLR 191 595 0 1318 288 56 28 chr2 172319653 172320192 -78367662 - L2 LINE L2 -920 2394 1841 212 239 0 0 chr2 172320372 172320418 -78367436 + MIR SINE MIR 94 139 -123 397 237 119 41 chr2 172320419 172320613 -78367241 - MER34B LTR ERV1 0 565 357 819 231 42 139 chr2 172320616 172320903 -78366951 - MER34B LTR ERV1 -128 437 124 216 0 0 0 chr2 172320903 172320927 -78366927 + (GA)n Simple_repeat Simple_repeat 1 24 0 819 231 42 139 chr2 172320927 172320973 -78366881 - MER34B LTR ERV1 -441 124 75 808 154 0 8 chr2 172320973 172321090 -78366764 - FLAM_C SINE Alu -16 117 2 819 231 42 139 chr2 172321090 172321236 -78366618 - MER34B LTR ERV1 -490 75 4 201 216 136 11 chr2 172321243 172321331 -78366523 + MIR SINE MIR 146 244 -18 941 304 38 69 chr2 172321333 172321894 -78365960 - L2 LINE L2 -2 3270 2722 858 185 0 0 chr2 172321902 172322048 -78365806 - FRAM SINE Alu -11 165 20 384 186 105 0 chr2 172322281 172322367 -78365487 + MER69 DNA AcHobo 2162 2256 -270 1262 116 97 42 chr2 172322372 172322588 -78365266 + AluJo SINE Alu 85 312 0 253 176 51 209 chr2 172322591 172322745 -78365109 + MER69 DNA AcHobo 2269 2446 -80 1210 177 0 0 chr2 172322745 172322920 -78364934 - FAM SINE Alu 0 175 1 2508 63 0 0 chr2 172322927 172323227 -78364627 - AluY SINE Alu -11 300 1 253 176 51 209 chr2 172323227 172323360 -78364494 + MER69 DNA AcHobo 2452 2517 -9 436 230 115 0 chr2 172323368 172323481 -78364373 + LTR33 LTR ERVL 389 514 -7 209 182 0 0 chr2 172323581 172323614 -78364240 + (CATA)n Simple_repeat Simple_repeat 2 34 0 333 0 0 0 chr2 172323619 172323656 -78364198 + (TG)n Simple_repeat Simple_repeat 2 38 0 922 126 15 7 chr2 172323792 172323927 -78363927 - AluJo SINE Alu -176 136 1 2342 102 3 0 chr2 172324771 172325076 -78362778 + AluSp SINE Alu 1 306 -7 1436 127 19 5 chr2 172325084 172325297 -78362557 + AluSg/x SINE Alu 89 304 -8 2430 77 0 0 chr2 172325309 172325607 -78362247 + AluY SINE Alu 3 300 -11 2251 96 0 0 chr2 172326491 172326783 -78361071 - AluSq SINE Alu -21 292 1 352 204 0 34 chr2 172326819 172326907 -78360947 - L1MA9 LINE L1 0 6312 6228 1549 158 116 101 chr2 172326907 172327512 -78360342 - MER4C LTR ERV1 0 465 1 3162 181 94 34 chr2 172327512 172328268 -78359586 - L1ME1 LINE L1 -79 6087 5287 2265 108 0 3 chr2 172328271 172328577 -78359277 - AluSg SINE Alu 0 310 6 1276 153 0 0 chr2 172328582 172328771 -78359083 - AluSc SINE Alu -12 297 109 * 1433 117 5 0 chr2 172328770 172328966 -78358888 - AluSq SINE Alu -116 197 1 3945 251 57 13 chr2 172328968 172330241 -78357613 - L1MEc LINE L1 -4411 1985 657 981 102 34 28 chr2 172330241 172330417 -78357437 + L1MA3 LINE L1 5921 6097 -208 1535 143 0 56 chr2 172330417 172330528 -78357326 + AluJb SINE Alu 36 152 -160 2358 96 3 0 chr2 172330528 172330840 -78357014 + AluSp SINE Alu 1 313 0 1535 143 0 56 chr2 172330840 172330980 -78356874 + AluJb SINE Alu 152 273 -39 378 0 0 0 chr2 172330993 172331035 -78356819 + (CA)n Simple_repeat Simple_repeat 1 42 0 2290 85 0 10 chr2 172331035 172331330 -78356524 - AluSc SINE Alu -17 292 1 3230 141 131 49 chr2 172331479 172331971 -78355883 - LTR48 LTR ERV1 -13 757 200 2476 88 0 0 chr2 172331971 172332279 -78355575 - AluSg SINE Alu -2 308 1 3230 141 131 49 chr2 172332279 172332496 -78355358 - LTR48 LTR ERV1 -570 200 2 1116 266 64 44 chr2 172332743 172333197 -78354657 + LTR67 LTR ERVL 52 514 -43 1719 180 29 38 chr2 172333198 172333571 -78354283 + MLT1A2 LTR MaLR 1 428 0 1285 231 14 32 chr2 172333657 172333939 -78353915 - MER58B DNA MER1_type -35 306 30 377 164 30 0 chr2 172333956 172334023 -78353831 + LTR67 LTR ERVL 489 557 0 235 351 45 60 chr2 172334030 172334164 -78353690 - L3b LINE CR1 -59 1524 1393 1872 136 0 48 chr2 172334955 172335098 -78352756 + AluJb SINE Alu 1 149 -152 2225 127 0 6 chr2 172335098 172335413 -78352441 + AluSq SINE Alu 1 313 0 1872 136 0 48 chr2 172335413 172335584 -78352270 + AluJb SINE Alu 149 301 0 2764 148 75 2 chr2 172335670 172336151 -78351703 + L1MC3 LINE L1 7262 7777 -8 2371 65 0 3 chr2 172337021 172337314 -78350540 - AluY SINE Alu -19 292 1 2157 116 3 3 chr2 172337404 172337705 -78350149 + AluSq SINE Alu 1 301 -12 408 227 118 17 chr2 172337720 172337839 -78350015 + MIR3 SINE MIR 15 145 -63 1487 196 18 0 chr2 172337900 172338175 -78349679 - AluJo SINE Alu -32 280 1 246 224 0 0 chr2 172338310 172338359 -78349495 - LTR67 LTR ERVL -19 538 490 465 252 65 118 chr2 172338366 172338612 -78349242 - LTR67 LTR ERVL -320 237 5 198 350 0 0 chr2 172339627 172339687 -78348167 - L2 LINE L2 0 3272 3213 1817 245 30 12 chr2 172339687 172340119 -78347735 + MER69 DNA AcHobo 4 443 -2083 * 1989 174 138 35 chr2 172340114 172340436 -78347418 + MER69 DNA AcHobo 1920 2207 -319 2131 130 3 13 chr2 172340436 172340752 -78347102 + AluSq SINE Alu 1 313 0 1989 174 138 35 chr2 172340752 172340979 -78346875 + MER69 DNA AcHobo 2207 2526 0 1382 224 45 62 chr2 172341159 172341182 -78346672 - MER21B LTR ERV1 -62 801 779 5289 94 8 26 chr2 172341182 172341885 -78345969 + LTR8 LTR ERV1 1 691 0 1382 224 45 62 chr2 172341885 172342279 -78345575 - MER21B LTR ERV1 -84 779 391 2390 188 70 54 chr2 172342279 172342296 -78345558 + LTR26E LTR ERV1 1 16 -606 2384 198 73 78 chr2 172342296 172343024 -78344830 - LTR8A LTR ERV1 -3 724 1 2390 188 70 54 chr2 172343024 172343618 -78344236 + LTR26E LTR ERV1 16 622 0 1106 234 31 32 chr2 172343618 172344041 -78343813 - MER21B LTR ERV1 -469 394 8 2364 89 0 0 chr2 172344191 172344484 -78343370 + AluSg SINE Alu 1 293 -17 239 238 16 63 chr2 172344713 172344776 -78343078 + MIR3 SINE MIR 126 185 -23 1109 153 107 5 chr2 172344995 172345211 -78342643 + LTR23 LTR ERV1 1 238 -199 935 143 8 8 chr2 172345219 172345352 -78342502 - FLAM_C SINE Alu 0 133 1 300 125 71 0 chr2 172345422 172345478 -78342376 + LTR23 LTR ERV1 240 299 -138 2164 119 0 13 chr2 172345481 172345783 -78342071 + AluSx SINE Alu 1 298 -14 230 143 24 0 chr2 172345822 172345864 -78341990 - MER57A LTR ERV1 -66 337 295 1743 185 0 13 chr2 172346040 172346348 -78341506 + AluJo SINE Alu 2 305 -7 33 0 0 0 chr2 172346352 172346385 -78341469 + AT_rich Low_complexity Low_complexity 1 33 0 215 291 247 11 chr2 172346831 172347013 -78340841 + MIR SINE MIR 2 226 -36 554 295 118 38 chr2 172347146 172347383 -78340471 - L3 LINE CR1 -24 1553 1298 2026 111 0 90 chr2 172347398 172347741 -78340113 - AluSq SINE Alu -1 312 1 2334 101 0 0 chr2 172348242 172348539 -78339315 - AluSg SINE Alu -13 297 1 232 89 22 22 chr2 172348539 172348584 -78339270 + (TTCTC)n Simple_repeat Simple_repeat 3 47 0 1697 150 3 28 chr2 172348643 172348929 -78338925 + AluJo SINE Alu 1 279 -33 2002 142 69 6 chr2 172349147 172349464 -78338390 - MER1B DNA MER1_type 0 337 1 1914 228 117 60 chr2 172349801 172350472 -78337382 + LTR41 LTR ERVL 3 720 -53 2069 104 0 40 chr2 172350472 172350816 -78337038 + AluSx SINE Alu 1 332 0 1914 228 117 60 chr2 172350816 172350870 -78336984 + LTR41 LTR ERVL 720 770 -3 423 246 162 12 chr2 172350944 172351111 -78336743 - MLT1K LTR MaLR -4 584 393 209 125 25 0 chr2 172351136 172351176 -78336678 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 342 0 0 0 chr2 172351285 172351323 -78336531 + (A)n Simple_repeat Simple_repeat 1 38 0 308 314 48 19 chr2 172351372 172351477 -78336377 - MLT1K LTR MaLR -356 232 125 1104 279 57 40 chr2 172351753 172351937 -78335917 + MLT1L LTR MaLR 1 180 -435 2244 127 0 0 chr2 172351937 172352245 -78335609 - AluSx SINE Alu -4 308 1 1104 279 57 40 chr2 172352245 172352531 -78335323 + MLT1L LTR MaLR 180 479 -136 880 211 78 32 chr2 172352531 172352765 -78335089 + MER39 LTR ERV1 1 227 -426 2204 133 51 8 chr2 172352765 172353119 -78334735 + MER39 LTR ERV1 339 707 0 349 231 121 0 chr2 172353125 172353216 -78334638 + MLT1L LTR MaLR 483 584 -31 342 0 0 0 chr2 172353713 172353751 -78334103 + (CA)n Simple_repeat Simple_repeat 2 39 0 * 351 0 0 0 chr2 172353750 172353789 -78334065 + (TC)n Simple_repeat Simple_repeat 1 39 0 420 244 59 13 chr2 172353890 172354053 -78333801 + MIR SINE MIR 1 168 -65 302 236 52 89 chr2 172354249 172354440 -78333414 + L1ME LINE L1 2 185 -5934 699 272 129 39 chr2 172354749 172355561 -78332293 + L1ME LINE L1 2433 3317 -2812 240 197 45 15 chr2 172355573 172355639 -78332215 + MER116 DNA Mariner 1 68 -12 227 253 91 26 chr2 172355639 172355793 -78332061 + L1ME LINE L1 3332 3495 -2634 274 296 17 47 chr2 172355903 172356075 -78331779 + L1ME LINE L1 5614 5780 -324 2261 98 23 0 chr2 172356120 172356426 -78331428 - AluSp SINE Alu 0 313 1 899 182 58 70 chr2 172356712 172357099 -78330755 + MLT1C LTR MaLR 1 440 -27 3337 157 11 17 chr2 172357452 172357986 -78329868 - LTR26B LTR ERV1 0 531 1 222 315 90 9 chr2 172359510 172359621 -78328233 + MIR SINE MIR 67 186 -76 1442 200 15 4 chr2 172359633 172359903 -78327951 - AluJo SINE Alu -22 290 18 2316 120 0 0 chr2 172359990 172360298 -78327556 - AluSx SINE Alu -4 308 1 1074 204 139 109 chr2 172360560 172361020 -78326834 - MLT1K LTR MaLR -2 474 1 427 245 41 0 chr2 172361957 172362055 -78325799 - MLT1I LTR MaLR 0 409 308 771 166 53 20 chr2 172362232 172362383 -78325471 + L1MC4 LINE L1 6707 6862 -1180 3565 180 86 34 chr2 172362431 172363636 -78324218 - L1M4 LINE L1 -409 5769 4495 3931 137 27 21 chr2 172363675 172364413 -78323441 + L1MA4 LINE L1 4560 5325 -975 2174 125 3 0 chr2 172364413 172364710 -78323144 + AluSx SINE Alu 2 299 -13 3931 137 27 21 chr2 172364710 172365075 -78322779 + L1MA4 LINE L1 5325 5686 -614 2154 124 0 0 chr2 172365077 172365384 -78322470 + AluSx SINE Alu 1 307 0 1214 97 24 24 chr2 172365384 172365591 -78322263 + L1MA4 LINE L1 6093 6299 -1 1359 165 28 16 chr2 172365594 172365870 -78321984 + AluJb SINE Alu 35 312 0 632 322 50 31 chr2 172365877 172366197 -78321657 - MLT1I LTR MaLR -13 396 71 1353 197 41 56 chr2 172366229 172366569 -78321285 + MLT1B LTR MaLR 13 347 -43 240 349 0 12 chr2 172366909 172366995 -78320859 - MLT1K LTR MaLR -501 87 3 838 115 0 0 chr2 172367162 172367275 -78320579 - FLAM_C SINE Alu -17 126 14 27 0 0 0 chr2 172367295 172367322 -78320532 + AT_rich Low_complexity Low_complexity 1 27 0 1772 231 117 8 chr2 172367426 172367897 -78319957 - MLT1F LTR MaLR -18 524 3 1555 199 80 84 chr2 172367935 172368137 -78319717 + MLT1D LTR MaLR 3 204 -301 1824 176 21 61 chr2 172368137 172368291 -78319563 + MLT1A1 LTR MaLR 5 164 -201 2170 135 0 0 chr2 172368291 172368587 -78319267 + AluSx SINE Alu 1 296 -16 1824 176 21 61 chr2 172368587 172368808 -78319046 + MLT1A1 LTR MaLR 164 365 0 1555 199 80 84 chr2 172368808 172369058 -78318796 + MLT1D LTR MaLR 204 453 -52 372 214 254 16 chr2 172369101 172369227 -78318627 + MIR SINE MIR 15 170 -92 1274 123 31 35 chr2 172369251 172369287 -78318567 - L1MB2 LINE L1 -9 6162 6127 1674 172 10 111 chr2 172369287 172369693 -78318161 + MLT1A1 LTR MaLR 1 365 0 1274 123 31 35 chr2 172369693 172369884 -78317970 - L1MB2 LINE L1 -44 6127 5936 2147 119 3 7 chr2 172369885 172370220 -78317634 - AluSc SINE Alu 0 309 1 415 117 0 0 chr2 172370226 172370286 -78317568 + MLT1D LTR MaLR 445 504 -1 289 266 0 0 chr2 172370966 172371030 -78316824 - L2 LINE L2 0 3272 3209 2348 178 46 33 chr2 172371153 172371613 -78316241 - MLT1C LTR MaLR -1 466 1 2631 53 0 0 chr2 172371693 172371997 -78315857 - AluY SINE Alu -7 304 1 923 236 63 8 chr2 172372013 172372250 -78315604 + MIR SINE MIR 8 257 -5 1869 170 0 0 chr2 172372955 172373249 -78314605 + AluJo SINE Alu 5 298 -14 1005 179 16 21 chr2 172373482 172373672 -78314182 + MER5A DNA MER1_type 1 189 0 321 276 31 6 chr2 172373835 172373962 -78313892 - MIR SINE MIR -39 169 37 1251 117 22 0 chr2 172373966 172374146 -78313708 - AluJo SINE Alu -9 303 120 1311 149 18 36 chr2 172374238 172374459 -78313395 + AluJo SINE Alu 74 290 -22 897 165 181 27 chr2 172374463 172374651 -78313203 - AluJo SINE Alu -91 221 5 28 0 0 0 chr2 172374655 172374683 -78313171 + AT_rich Low_complexity Low_complexity 1 28 0 1873 161 19 13 chr2 172374689 172374999 -78312855 + AluJb SINE Alu 1 312 0 181 296 148 12 chr2 172375003 172375084 -78312770 - L3 LINE CR1 -940 637 546 24 32 0 0 chr2 172375084 172375115 -78312739 + AT_rich Low_complexity Low_complexity 1 31 0 265 283 28 103 chr2 172375527 172375672 -78312182 - MIR3 SINE MIR -67 141 8 231 241 35 0 chr2 172375873 172375931 -78311923 + G-rich Low_complexity Low_complexity 1 60 0 2169 100 24 3 chr2 172376052 172376342 -78311512 + AluSx SINE Alu 1 296 -16 2303 86 0 3 chr2 172376344 172376636 -78311218 + AluSg SINE Alu 1 291 -19 678 140 279 7 chr2 172377777 172377913 -78309941 + FAM SINE Alu 1 173 -2 2210 165 11 19 chr2 172378252 172378627 -78309227 - MLT1B LTR MaLR -3 387 16 239 280 63 21 chr2 172378690 172378833 -78309021 - L1ME LINE L1 -213 5908 5760 1942 256 132 11 chr2 172378848 172379478 -78308376 - L1MC4a LINE L1 -1643 6165 5460 320 339 35 6 chr2 172379482 172379653 -78308201 - L1ME LINE L1 -357 5764 5589 21 36 0 0 chr2 172379835 172379863 -78307991 + AT_rich Low_complexity Low_complexity 1 28 0 1973 113 0 22 chr2 172380165 172380439 -78307415 + AluSq SINE Alu 1 268 -45 6154 125 40 0 chr2 172380493 172381439 -78306415 - L1MC1 LINE L1 -5 6328 5345 2619 229 66 27 chr2 172381893 172382568 -78305286 - HsTC2c DNA Tc2 -1169 729 25 1891 170 0 3 chr2 172382568 172382868 -78304986 + AluJb SINE Alu 1 299 -13 2619 229 66 27 chr2 172382868 172382887 -78304967 - HsTC2c DNA Tc2 -1873 25 8 815 214 0 0 chr2 172382973 172383127 -78304727 - AluJb SINE Alu -24 288 135 2140 115 20 0 chr2 172383219 172383515 -78304339 - AluSx SINE Alu -10 302 1 365 264 117 59 chr2 172383610 172383849 -78304005 - L1MC4 LINE L1 -1021 7021 6769 2140 119 0 13 chr2 172384121 172384424 -78303430 - AluSx SINE Alu -13 299 1 2801 148 21 31 chr2 172384536 172385017 -78302837 + L1MB2 LINE L1 5692 6167 -4 23 33 0 0 chr2 172385105 172385135 -78302719 + AT_rich Low_complexity Low_complexity 1 30 0 2007 121 0 11 chr2 172385412 172385717 -78302137 - AluSg SINE Alu 0 303 2 2369 71 14 0 chr2 172385724 172386018 -78301836 - AluSp SINE Alu -15 298 1 527 122 0 0 chr2 172386024 172386106 -78301748 + MER53 DNA DNA 106 187 -2 563 12 35 12 chr2 172386213 172386298 -78301556 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 200 315 11 22 chr2 172386309 172386401 -78301453 + L3 LINE CR1 982 1072 -505 457 338 95 23 chr2 172386419 172386724 -78301130 + L3 LINE CR1 1210 1536 -41 2335 98 0 7 chr2 172387008 172387313 -78300541 + AluSx SINE Alu 1 303 -9 727 217 84 0 chr2 172387480 172387623 -78300231 - FAM SINE Alu -19 156 2 1650 191 10 10 chr2 172388666 172388960 -78298894 - AluJb SINE Alu -15 297 4 259 313 0 0 chr2 172390125 172390192 -78297662 - L2 LINE L2 -15 3298 3232 389 258 32 65 chr2 172390226 172390381 -78297473 - MER5A DNA MER1_type 0 189 40 2138 140 0 0 chr2 172390387 172390695 -78297159 - AluSx SINE Alu -4 308 1 213 239 0 0 chr2 172390702 172390748 -78297106 - MER5A DNA MER1_type -138 51 6 2143 123 0 0 chr2 172391777 172392069 -78295785 + AluSx SINE Alu 3 294 -18 315 71 0 0 chr2 172392083 172392125 -78295729 + (TTCC)n Simple_repeat Simple_repeat 1 42 0 1701 137 80 43 chr2 172392125 172392425 -78295429 - AluSx SINE Alu -1 311 1 2537 50 3 0 chr2 172392669 172392970 -78294884 - AluY SINE Alu -9 302 1 2711 39 0 0 chr2 172393345 172393656 -78294198 - AluY SINE Alu 0 311 1 206 289 0 0 chr2 172393918 172393963 -78293891 - MER91 DNA MER1_type -145 45 1 2323 98 3 13 chr2 172394173 172394489 -78293365 + AluSq SINE Alu 1 313 0 2496 56 0 16 chr2 172394492 172394798 -78293056 + AluY SINE Alu 2 302 -9 2365 87 3 3 chr2 172395483 172395794 -78292060 - AluY SINE Alu 0 311 1 1697 168 7 7 chr2 172395872 172396157 -78291697 + AluJb SINE Alu 10 294 -18 227 158 0 0 chr2 172396214 172396252 -78291602 + MER103 DNA DNA 3 40 -126 1071 180 5 50 chr2 172396683 172396905 -78290949 - AluJb SINE Alu -100 212 1 2236 183 78 38 chr2 172396937 172397018 -78290836 - MER69 DNA AcHobo -1 2525 2449 2151 113 14 0 chr2 172397018 172397310 -78290544 - AluSx SINE Alu -16 296 1 2236 183 78 38 chr2 172397310 172397840 -78290014 - MER69 DNA AcHobo -77 2449 1889 1192 268 103 0 chr2 172397844 172398173 -78289681 - MER69 DNA AcHobo -2085 441 79 617 85 0 0 chr2 172398236 172398318 -78289536 - AluJ/FRAM SINE Alu -9 303 222 256 195 57 138 chr2 172398335 172398458 -78289396 + MLT1J LTR MaLR 244 356 -155 2042 102 4 4 chr2 172398752 172399026 -78288828 + AluSg SINE Alu 26 299 -11 2105 105 20 17 chr2 172399302 172399461 -78288393 - AluSx SINE Alu -15 297 135 2248 108 3 10 chr2 172399461 172399768 -78288086 - AluSg SINE Alu -5 305 1 2105 105 20 17 chr2 172399768 172399904 -78287950 - AluSx SINE Alu -177 135 1 550 248 14 35 chr2 172400339 172400484 -78287370 - L2 LINE L2 0 3313 3172 2463 97 0 0 chr2 172401104 172401414 -78286440 - AluSg SINE Alu 0 310 1 549 293 68 19 chr2 172401631 172401836 -78286018 - MER20 DNA MER1_type -4 215 1 712 242 116 15 chr2 172401995 172402193 -78285661 - MARNA DNA Mariner -124 462 245 303 347 77 70 chr2 172402328 172403039 -78284815 - L2 LINE L2 -46 3226 2509 2257 78 0 4 chr2 172403053 172403357 -78284497 + AluY SINE Alu 1 303 0 2374 94 3 0 chr2 172403523 172403830 -78284024 - AluSp SINE Alu -4 309 2 2114 204 51 25 chr2 172403830 172404319 -78283535 - MLT1D LTR MaLR -3 502 1 260 288 58 45 chr2 172404323 172404794 -78283060 + L1M4 LINE L1 4942 5417 -734 338 250 0 0 chr2 172405114 172405194 -78282660 - L1MC4 LINE L1 -7 8035 7956 * 1585 209 133 58 chr2 172405186 172405241 -78282613 - L1MC4 LINE L1 -166 7653 7604 1754 179 0 6 chr2 172405241 172405554 -78282300 - AluJo SINE Alu -1 311 1 1585 209 133 58 chr2 172405554 172406049 -78281805 - L1MC4 LINE L1 -215 7604 7052 2679 162 41 0 chr2 172406342 172406755 -78281099 + MSTB1 LTR MaLR 1 430 -2 180 0 0 0 chr2 172407348 172407368 -78280486 + (A)n Simple_repeat Simple_repeat 1 20 0 263 139 14 167 chr2 172407958 172408030 -78279824 - AluYb8 SINE Alu -9 299 239 1282 115 0 22 chr2 172408030 172408075 -78279779 - AluSq SINE Alu -135 178 134 2090 141 0 3 chr2 172408075 172408380 -78279474 - AluSx SINE Alu -8 304 1 1282 115 0 22 chr2 172408380 172408516 -78279338 - AluSq SINE Alu -179 134 1 21 36 0 0 chr2 172409265 172409293 -78278561 + AT_rich Low_complexity Low_complexity 1 28 0 791 293 12 12 chr2 172409849 172410091 -78277763 + MIR SINE MIR 9 250 -12 2310 80 3 17 chr2 172410094 172410395 -78277459 + AluSp SINE Alu 1 297 -16 265 224 20 157 chr2 172410703 172410759 -78277095 - L2 LINE L2 -379 2934 2872 1929 149 0 3 chr2 172410759 172411055 -78276799 + AluJb SINE Alu 11 305 -7 2169 118 7 7 chr2 172411059 172411363 -78276491 + AluSx SINE Alu 1 304 -8 265 224 20 157 chr2 172411363 172411448 -78276406 - L2 LINE L2 -444 2869 2808 * 1012 271 297 8 chr2 172411444 172411890 -78275964 - L2 LINE L2 -620 2694 2378 584 192 66 115 chr2 172411890 172411952 -78275902 - MER5B DNA MER1_type -2 176 112 2346 98 0 9 chr2 172411952 172412268 -78275586 + AluSp SINE Alu 1 313 0 584 192 66 115 chr2 172412268 172412387 -78275467 - MER5B DNA MER1_type -66 112 4 1012 271 297 8 chr2 172412387 172412553 -78275301 - L2 LINE L2 -936 2378 1905 1849 164 51 27 chr2 172412615 172412951 -78274903 + MER2 DNA MER2_type 1 344 0 1574 166 54 11 chr2 172412954 172413231 -78274623 - AluJo SINE Alu -23 289 1 437 324 78 0 chr2 172413472 172413614 -78274240 - L2 LINE L2 -18 3254 3102 225 176 59 0 chr2 172414154 172414205 -78273649 + (TGGA)n Simple_repeat Simple_repeat 4 57 0 327 241 74 37 chr2 172414390 172414498 -78273356 - L2 LINE L2 -978 2336 2225 1443 182 4 15 chr2 172414501 172414770 -78273084 + AluJo SINE Alu 1 266 -46 478 167 0 0 chr2 172414770 172414842 -78273012 + AluJo/FRAM SINE Alu 210 281 -31 342 256 128 29 chr2 172415124 172415296 -78272558 - L1ME LINE L1 -414 5707 5519 2978 101 62 7 chr2 172415300 172415705 -78272149 - MSTA LTR MaLR -1 427 1 3075 210 111 14 chr2 172415776 172416663 -78271191 - L1ME3A LINE L1 -2 6168 5199 548 152 80 116 chr2 172416670 172416808 -78271046 - FLAM_A SINE Alu -9 133 1 833 195 81 0 chr2 172416822 172416971 -78270883 - AluJb SINE Alu -14 298 138 928 261 25 19 chr2 172416971 172417289 -78270565 - L1ME3A LINE L1 -944 5202 4883 559 281 106 78 chr2 172417401 172417760 -78270094 - MLT1I LTR MaLR 0 409 41 228 301 72 7 chr2 172417949 172418102 -78269752 - L1ME3A LINE L1 -3839 2307 2145 362 259 59 7 chr2 172418482 172418617 -78269237 - L1ME4a LINE L1 0 6121 5980 377 239 169 0 chr2 172418619 172418725 -78269129 + FLAM_A SINE Alu 2 106 -27 661 234 95 65 chr2 172418725 172419092 -78268762 - L1ME4a LINE L1 -127 5994 5617 2245 97 10 0 chr2 172419099 172419389 -78268465 - AluSx SINE Alu -15 297 5 269 98 0 0 chr2 172419658 172419699 -78268155 - Alu SINE Alu -258 45 5 28 0 0 0 chr2 172419795 172419823 -78268031 + AT_rich Low_complexity Low_complexity 1 28 0 39 0 0 0 chr2 172420207 172420246 -78267608 + AT_rich Low_complexity Low_complexity 1 39 0 740 278 139 12 chr2 172421184 172421522 -78266332 - L1ME3A LINE L1 -208 5962 5582 367 120 40 100 chr2 172421558 172421658 -78266196 - MER53 DNA DNA 0 189 96 302 302 52 78 chr2 172421866 172422012 -78265842 - L2 LINE L2 -35 3237 3096 825 222 28 38 chr2 172422012 172422224 -78265630 + MER63A DNA MER1_type 1 210 0 302 302 52 78 chr2 172422224 172422269 -78265585 - L2 LINE L2 -176 3096 3051 2381 79 0 0 chr2 172422269 172422561 -78265293 - AluSg SINE Alu -18 292 1 180 222 22 0 chr2 172422871 172422916 -78264938 - L2 LINE L2 0 3272 3227 893 126 0 22 chr2 172423218 172423353 -78264501 - FLAM_C SINE Alu -1 132 1 309 241 105 15 chr2 172423555 172423688 -78264166 - L1ME4a LINE L1 -3 6118 5974 596 175 0 0 chr2 172423688 172423785 -78264069 - FLAM_A SINE Alu -11 131 35 226 333 0 0 chr2 172423875 172423959 -78263895 - L1ME4a LINE L1 -284 5837 5754 1712 159 54 4 chr2 172424170 172424447 -78263407 + AluSx SINE Alu 5 295 -17 254 289 26 53 chr2 172424578 172424654 -78263200 - MIR3 SINE MIR -14 194 121 1599 196 44 68 chr2 172424846 172425100 -78262754 + L1ME1 LINE L1 5633 5892 -274 2162 97 30 7 chr2 172425100 172425399 -78262455 + AluSx SINE Alu 1 306 -6 1599 196 44 68 chr2 172425399 172425629 -78262225 + L1ME1 LINE L1 5892 6105 -61 2276 79 0 26 chr2 172425629 172425934 -78261920 - AluSg SINE Alu -13 297 1 1599 196 44 68 chr2 172425934 172425990 -78261864 + L1ME1 LINE L1 6105 6161 -5 308 308 128 23 chr2 172426930 172427102 -78260752 - L1M2 LINE L1 -5438 1411 1222 * 321 308 164 34 chr2 172426956 172427188 -78260666 + L1M2 LINE L1 558 759 -6090 282 95 0 0 chr2 172427188 172427230 -78260624 + (CCG)n Simple_repeat Simple_repeat 1 42 0 321 308 164 34 chr2 172427230 172427491 -78260363 + L1M2 LINE L1 759 1115 -5734 421 277 11 34 chr2 172427494 172427671 -78260183 + C-rich Low_complexity Low_complexity 4 176 0 229 136 37 74 chr2 172427907 172427988 -78259866 + C-rich Low_complexity Low_complexity 3 80 0 240 35 0 0 chr2 172429570 172429599 -78258255 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 260 318 0 0 chr2 172429602 172429668 -78258186 - L2 LINE L2 -14 3258 3193 1697 136 94 0 chr2 172431086 172431351 -78256503 + AluJb SINE Alu 1 290 -22 1488 160 186 14 chr2 172431683 172432096 -78255758 - Charlie1 DNA MER1_type -14 2747 2264 187 232 0 71 chr2 172432190 172432246 -78255608 + L3 LINE CR1 1218 1269 -308 405 299 90 0 chr2 172433506 172433650 -78254204 + MIR3 SINE MIR 4 160 -48 * 427 259 193 0 chr2 172433627 172433762 -78254092 - MIR3 SINE MIR -15 193 33 376 212 47 12 chr2 172433792 172433877 -78253977 + MIR3 SINE MIR 118 205 -3 1528 160 61 41 chr2 172434005 172434299 -78253555 + AluJo SINE Alu 1 300 -12 26 0 0 0 chr2 172434381 172434407 -78253447 + AT_rich Low_complexity Low_complexity 1 26 0 249 307 123 22 chr2 172434545 172434724 -78253130 + L2 LINE L2 3114 3310 -3 475 243 146 38 chr2 172434858 172435043 -78252811 - MIR SINE MIR -56 206 2 240 35 0 0 chr2 172435650 172435679 -78252175 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2637 40 0 3 chr2 172436417 172436721 -78251133 + AluY SINE Alu 1 303 -8 736 236 77 64 chr2 172436732 172436873 -78250981 - MIR SINE MIR -26 236 89 1990 128 14 3 chr2 172436873 172437163 -78250691 + AluJb SINE Alu 1 293 -19 736 236 77 64 chr2 172437163 172437254 -78250600 - MIR SINE MIR -173 89 1 298 269 235 39 chr2 172437316 172437576 -78250278 - MLT1K LTR MaLR -4 584 274 271 294 24 32 chr2 172437903 172438029 -78249825 - L1ME LINE L1 -473 5884 5760 27 29 0 0 chr2 172438193 172438227 -78249627 + AT_rich Low_complexity Low_complexity 1 34 0 1919 160 3 6 chr2 172438256 172438568 -78249286 - AluJo SINE Alu -1 311 1 293 200 157 86 chr2 172438764 172438904 -78248950 + MIR SINE MIR 63 212 -50 286 125 2 0 chr2 172438978 172439027 -78248827 - Alu SINE Alu -11 291 249 240 35 0 0 chr2 172439068 172439097 -78248757 + (A)n Simple_repeat Simple_repeat 1 29 0 279 79 0 0 chr2 172439242 172439280 -78248574 + (CA)n Simple_repeat Simple_repeat 1 38 0 198 0 0 0 chr2 172439279 172439301 -78248553 + (TA)n Simple_repeat Simple_repeat 2 23 0 * 1995 138 10 0 chr2 172439301 172439591 -78248263 - AluSx SINE Alu -19 293 1 2170 103 0 0 chr2 172440003 172440295 -78247559 + AluY SINE Alu 2 293 -18 732 158 0 9 chr2 172440651 172440765 -78247089 + FAM SINE Alu 1 113 -72 250 296 165 35 chr2 172440951 172441066 -78246788 - L2 LINE L2 -1 3271 3142 416 235 61 0 chr2 172441764 172441862 -78245992 - U13 snRNA snRNA 0 104 1 878 194 0 0 chr2 172441871 172442015 -78245839 - FRAM SINE Alu -33 143 1 1036 225 137 29 chr2 172442123 172442567 -78245287 - L1ME3A LINE L1 -1 6169 5678 2380 95 0 0 chr2 172442578 172442882 -78244972 - AluSg SINE Alu -6 304 1 1781 134 53 3 chr2 172442882 172443165 -78244689 - AluSx SINE Alu -15 297 1 534 219 58 24 chr2 172443165 172443429 -78244425 - L1ME LINE L1 -711 5689 5414 2672 236 58 17 chr2 172443471 172444625 -78243229 - L1ME LINE L1 -3103 3279 2074 1895 127 4 7 chr2 172444632 172444932 -78242922 - AluSx SINE Alu 0 336 38 291 104 0 0 chr2 172445066 172445114 -78242740 + (TTCA)n Simple_repeat Simple_repeat 3 50 0 747 159 37 55 chr2 172445116 172445279 -78242575 - AluSg/x SINE Alu -30 280 121 587 289 98 43 chr2 172445307 172446761 -78241093 - L1MEd LINE L1 -3368 2761 1172 524 203 146 57 chr2 172446761 172446953 -78240901 - MER3 DNA MER1_type 0 209 1 587 289 98 43 chr2 172446953 172447373 -78240481 - L1MEd LINE L1 -4957 1172 776 1961 140 27 12 chr2 172448087 172448350 -78239504 + MER1B DNA MER1_type 4 274 -2436 267 31 0 0 chr2 172448350 172448382 -78239472 + (CACCC)n Simple_repeat Simple_repeat 5 36 0 1961 140 27 12 chr2 172448382 172448447 -78239407 + MER1B DNA MER1_type 274 337 0 183 42 0 0 chr2 172448559 172448583 -78239271 + (TTG)n Simple_repeat Simple_repeat 2 25 0 2009 117 17 3 chr2 172448585 172448876 -78238978 - AluSx SINE Alu -17 295 1 2237 110 3 3 chr2 172450317 172450625 -78237229 - AluSx SINE Alu -4 308 1 1413 166 162 0 chr2 172450898 172451151 -78236703 - AluJb SINE Alu -8 294 1 420 202 92 0 chr2 172451211 172451330 -78236524 - MER58 DNA MER1_type -109 232 103 263 122 0 20 chr2 172451551 172451600 -78236254 - L1MB2 LINE L1 -3 6168 6121 207 69 0 0 chr2 172451608 172451637 -78236217 + (TCCTG)n Simple_repeat Simple_repeat 2 30 0 522 87 262 10 chr2 172451637 172451731 -78236123 - AluSg/x SINE Alu -22 288 165 2440 181 64 4 chr2 172451744 172452391 -78235463 - L1MB2 LINE L1 -38 6133 5391 584 178 0 19 chr2 172452393 172452404 -78235450 - FLAM_A SINE Alu -169 142 132 2026 100 0 4 chr2 172452404 172452673 -78235181 - AluSq SINE Alu -45 268 1 584 178 0 19 chr2 172452673 172452768 -78235086 - FLAM_A SINE Alu -179 132 38 3488 118 65 31 chr2 172452789 172452847 -78235007 - L1MA7 LINE L1 -3 6288 6233 225 0 0 0 chr2 172452847 172452872 -78234982 + (TA)n Simple_repeat Simple_repeat 2 26 0 210 37 0 0 chr2 172452871 172452898 -78234956 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 3488 118 65 31 chr2 172452872 172453292 -78234562 - L1MA7 LINE L1 -58 6233 5805 793 181 23 53 chr2 172453292 172453463 -78234391 + FRAM SINE Alu 1 166 0 3488 118 65 31 chr2 172453463 172453655 -78234199 - L1MA7 LINE L1 -486 5805 5621 455 157 45 0 chr2 172453656 172453745 -78234109 - L1MB2 LINE L1 -749 5397 5305 731 184 37 7 chr2 172454185 172454321 -78233533 + AluJb SINE Alu 126 265 -47 813 152 13 0 chr2 172454338 172454489 -78233365 + Tigger4(Zombi) DNA MER2_type 2579 2731 0 1858 146 6 32 chr2 172454557 172454872 -78232982 - AluSx SINE Alu -2 310 4 21 0 0 0 chr2 172455099 172455120 -78232734 + AT_rich Low_complexity Low_complexity 1 21 0 1078 191 67 0 chr2 172455311 172455521 -78232333 - AluJo SINE Alu -14 298 75 1976 123 67 22 chr2 172455783 172456142 -78231712 + THE1C LTR MaLR 1 375 0 389 165 101 18 chr2 172456367 172456476 -78231378 + L1ME4a LINE L1 5966 6083 -38 307 216 54 0 chr2 172456901 172456975 -78230879 - MER116 DNA Mariner 0 80 3 183 240 0 0 chr2 172457030 172457134 -78230720 + (TA)n Simple_repeat Simple_repeat 1 104 0 413 263 116 65 chr2 172457641 172457778 -78230076 - MIR SINE MIR -3 259 104 2127 130 7 0 chr2 172457778 172458070 -78229784 - AluSg SINE Alu -16 294 1 413 263 116 65 chr2 172458070 172458164 -78229690 - MIR SINE MIR -158 104 16 513 0 0 0 chr2 172458304 172458361 -78229493 + (TTATG)n Simple_repeat Simple_repeat 2 58 0 1286 165 51 31 chr2 172458379 172458634 -78229220 - AluJb SINE Alu -52 260 1 237 65 0 0 chr2 172459197 172459228 -78228626 + (CA)n Simple_repeat Simple_repeat 1 31 0 224 240 0 0 chr2 172459302 172459352 -78228502 + MIR SINE MIR 102 151 -111 243 247 0 0 chr2 172459382 172459455 -78228399 + (TA)n Simple_repeat Simple_repeat 1 73 0 568 264 42 6 chr2 172459697 172459864 -78227990 - MIR SINE MIR -11 251 79 25 75 0 0 chr2 172459909 172459962 -78227892 + AT_rich Low_complexity Low_complexity 1 53 0 220 226 0 19 chr2 172460270 172460323 -78227531 + (TATG)n Simple_repeat Simple_repeat 3 54 0 2322 100 0 6 chr2 172460887 172461198 -78226656 - AluSx SINE Alu -3 309 1 8814 176 70 55 chr2 172462326 172462366 -78225488 + Cheshire DNA MER1_type 86 124 -2296 772 60 0 0 chr2 172462366 172462466 -78225388 + L1PB1 LINE L1 6051 6150 -1 8814 176 70 55 chr2 172462466 172464357 -78223497 + Cheshire DNA MER1_type 124 1984 -436 1653 175 3 23 chr2 172464357 172464666 -78223188 - AluJo SINE Alu -9 303 1 8814 176 70 55 chr2 172464666 172464689 -78223165 + Cheshire DNA MER1_type 1984 2005 -415 2080 128 0 20 chr2 172464689 172464986 -78222868 + AluSx SINE Alu 1 291 -21 8814 176 70 55 chr2 172464986 172465104 -78222750 + Cheshire DNA MER1_type 2005 2120 -300 270 0 0 0 chr2 172465104 172465134 -78222720 + (TG)n Simple_repeat Simple_repeat 2 31 0 2087 140 3 0 chr2 172465135 172465435 -78222419 - AluSq SINE Alu -12 301 1 8814 176 70 55 chr2 172465435 172465644 -78222210 + Cheshire DNA MER1_type 2119 2408 -12 323 331 153 6 chr2 172465664 172465821 -78222033 - MER5A DNA MER1_type -1 188 9 255 255 0 0 chr2 172465846 172465893 -78221961 - L2 LINE L2 -16 3256 3210 2188 91 0 60 chr2 172465928 172466246 -78221608 + AluSc SINE Alu 1 299 -10 359 179 27 36 chr2 172466522 172466634 -78221220 - L1M4 LINE L1 -901 5245 5135 1749 153 14 4 chr2 172466658 172466933 -78220921 - AluJb SINE Alu -27 285 8 3573 164 27 19 chr2 172466947 172467919 -78219935 - L1MB3 LINE L1 0 6577 5522 2124 114 13 19 chr2 172467919 172468227 -78219627 - AluSx SINE Alu -6 306 1 3573 164 27 19 chr2 172468227 172468592 -78219262 - L1MB3 LINE L1 -1055 5522 5161 328 232 89 79 chr2 172469882 172470154 -78217700 - MER112 DNA MER1_type -2 258 1 256 238 0 16 chr2 172470255 172470318 -78217536 + (TA)n Simple_repeat Simple_repeat 2 63 0 1808 132 47 59 chr2 172470806 172471147 -78216707 + MER1B DNA MER1_type 1 337 0 432 356 36 0 chr2 172471188 172471407 -78216447 - L1ME LINE L1 -413 5708 5482 2440 70 10 0 chr2 172471471 172471773 -78216081 - AluSx SINE Alu -7 305 1 439 344 55 9 chr2 172471774 172471992 -78215862 - L1ME LINE L1 -745 5401 5174 647 196 13 6 chr2 172472097 172472255 -78215599 - Looper DNA T2_type 0 1558 1400 1994 194 82 46 chr2 172472271 172472719 -78215135 - Looper DNA T2_type -598 960 485 2409 69 10 13 chr2 172472719 172473025 -78214829 + AluSp SINE Alu 1 305 -8 1994 194 82 46 chr2 172473025 172473144 -78214710 - Looper DNA T2_type -1073 485 372 1896 202 41 53 chr2 172473144 172473328 -78214526 - MLT1D LTR MaLR 0 505 320 1848 171 3 0 chr2 172473328 172473638 -78214216 - AluSx SINE Alu -1 311 1 1896 202 41 53 chr2 172473638 172473964 -78213890 - MLT1D LTR MaLR -185 320 1 1591 133 58 50 chr2 172473966 172474328 -78213526 - Looper DNA T2_type -1185 373 9 256 282 29 10 chr2 172474417 172474520 -78213334 - L1P LINE L1 -1140 5006 4902 2247 107 0 7 chr2 172474619 172474919 -78212935 + AluSq SINE Alu 1 298 -15 261 322 43 0 chr2 172475217 172475332 -78212522 - L1MB3 LINE L1 -1538 5002 4883 350 278 156 47 chr2 172475388 172475920 -78211934 - L1MB3 LINE L1 -1771 4769 4180 2170 116 7 0 chr2 172475942 172476245 -78211609 + AluSg SINE Alu 1 305 -5 410 225 0 22 chr2 172476330 172476419 -78211435 - L1ME2 LINE L1 -49 6115 6029 1684 158 6 48 chr2 172476590 172476901 -78210953 - AluJb SINE Alu -14 298 1 436 251 103 36 chr2 172477011 172477234 -78210620 - L1MB3 LINE L1 -2862 3678 3441 1486 208 41 56 chr2 172477307 172477704 -78210150 - L1ME1 LINE L1 -3 6163 5773 2125 117 13 0 chr2 172477704 172478004 -78209850 - AluSx SINE Alu -8 304 1 1486 208 41 56 chr2 172478004 172478092 -78209762 - L1ME1 LINE L1 -393 5773 5685 2027 199 125 37 chr2 172478122 172478745 -78209109 - L1ME2 LINE L1 -89 6075 5398 339 277 168 0 chr2 172478744 172478946 -78208908 - L1MB3 LINE L1 -3145 3395 3160 * 440 263 87 39 chr2 172478972 172479296 -78208558 - L1MB3 LINE L1 -3488 3052 2627 1976 124 28 10 chr2 172479296 172479587 -78208267 + AluJb SINE Alu 1 296 -16 440 263 87 39 chr2 172479587 172479755 -78208099 - L1MB3 LINE L1 -3913 2627 2468 291 259 9 18 chr2 172479929 172480041 -78207813 - L1MC4 LINE L1 0 8042 7932 1693 159 14 10 chr2 172480098 172480415 -78207439 - AluJb SINE Alu 0 312 1 753 236 151 8 chr2 172480420 172480679 -78207175 - L1MC4 LINE L1 -996 7046 6751 830 276 100 56 chr2 172480698 172481326 -78206528 + L1MC4 LINE L1 7117 7772 -270 4471 146 42 3 chr2 172481706 172482478 -78205376 - L1MA5 LINE L1 -2 6298 5497 2322 87 3 7 chr2 172482478 172482788 -78205066 - AluSx SINE Alu -3 309 1 4092 143 59 133 chr2 172482789 172483434 -78204420 - L1MA5 LINE L1 -751 5395 4704 608 97 140 0 chr2 172483434 172483527 -78204327 + AluSq/x SINE Alu 1 106 -206 4092 143 59 133 chr2 172483527 172483899 -78203955 - L1MA5 LINE L1 -1442 4704 4391 2155 91 45 3 chr2 172483899 172484185 -78203669 - AluSx SINE Alu -14 298 1 4092 143 59 133 chr2 172484185 172484355 -78203499 - L1MA5 LINE L1 -1755 4391 4210 1364 136 139 27 chr2 172484650 172484908 -78202946 + AluSg1 SINE Alu 1 287 -22 210 361 0 21 chr2 172484922 172485019 -78202835 + L2 LINE L2 2705 2799 -515 722 244 92 30 chr2 172485133 172485428 -78202426 + L2 LINE L2 3001 3313 0 2858 190 38 34 chr2 172486529 172486826 -78201028 - L1MB7 LINE L1 -1 6183 5889 2351 90 7 0 chr2 172486826 172487126 -78200728 - AluSq SINE Alu -11 302 1 2858 190 38 34 chr2 172487126 172487543 -78200311 - L1MB7 LINE L1 -295 5889 5466 1962 182 93 8 chr2 172487543 172487963 -78199891 - MSTB2 LTR MaLR 0 443 1 973 196 90 27 chr2 172487963 172489775 -78198079 - L1MB7 LINE L1 -699 5467 3441 2174 131 66 0 chr2 172489786 172490167 -78197687 - L1MA9 LINE L1 -5 6307 5902 273 119 0 0 chr2 172490186 172490228 -78197626 + (TC)n Simple_repeat Simple_repeat 1 42 0 186 43 0 0 chr2 172490246 172490269 -78197585 + (TTTCC)n Simple_repeat Simple_repeat 5 27 0 1889 137 4 4 chr2 172490272 172490549 -78197305 - AluSx SINE Alu -35 277 1 4714 182 34 66 chr2 172490549 172491418 -78196436 - L1M4 LINE L1 -819 5327 4432 2081 131 0 3 chr2 172491418 172491715 -78196139 - AluSx SINE Alu -14 298 3 4714 182 34 66 chr2 172491715 172491847 -78196007 - L1M4 LINE L1 -1714 4432 4297 884 138 0 0 chr2 172491847 172491970 -78195884 - FLAM_C SINE Alu -16 127 5 4714 182 34 66 chr2 172491970 172492627 -78195227 - L1M4 LINE L1 -1849 4297 3723 1715 237 39 8 chr2 172492607 172493201 -78194653 - L1MB7 LINE L1 -2686 3460 2849 * 2387 81 3 0 chr2 172493284 172493580 -78194274 + AluSq SINE Alu 1 297 -16 301 300 106 70 chr2 172493741 172493968 -78193886 - HAL1b LINE L1 -1100 248 14 23 78 0 0 chr2 172494020 172494071 -78193783 + AT_rich Low_complexity Low_complexity 1 51 0 204 357 49 63 chr2 172494587 172494873 -78192981 + L2 LINE L2 2817 3098 -174 227 309 0 24 chr2 172495979 172496063 -78191791 - LTR67 LTR ERVL -41 516 435 2115 71 45 0 chr2 172496160 172496476 -78191378 + AluY SINE Alu 1 328 0 901 194 50 6 chr2 172496962 172497142 -78190712 - MER58A DNA MER1_type 0 224 37 753 178 48 0 chr2 172497169 172497315 -78190539 + MER3 DNA MER1_type 1 153 -56 455 178 40 0 chr2 172497671 172497772 -78190082 - L1ME3A LINE L1 -27 6143 6039 1581 264 37 75 chr2 172497775 172498355 -78189499 + L1M4 LINE L1 4214 4743 -1403 926 150 6 42 chr2 172498355 172498522 -78189332 + FRAM SINE Alu 2 162 -4 1581 264 37 75 chr2 172498522 172498921 -78188933 + L1M4 LINE L1 4743 5156 -990 1367 129 119 0 chr2 172499034 172499244 -78188610 + AluSg SINE Alu 1 235 -75 1701 213 58 27 chr2 172499270 172499753 -78188101 - HAL1 LINE L1 -721 1786 1289 543 294 138 50 chr2 172499748 172499859 -78187995 - HAL1 LINE L1 -1655 852 752 * 1751 155 25 14 chr2 172499859 172500143 -78187711 - AluJb SINE Alu -25 287 1 543 294 138 50 chr2 172500143 172500409 -78187445 - HAL1 LINE L1 -1755 752 442 * 1663 251 132 25 chr2 172500399 172501521 -78186333 - L1ME LINE L1 -4715 1365 159 2048 147 0 0 chr2 172501541 172501848 -78186006 - AluSx SINE Alu -5 307 1 245 218 146 64 chr2 172501852 172501962 -78185892 - L1ME LINE L1 -5901 169 51 288 325 42 24 chr2 172502431 172502643 -78185211 - HAL1b LINE L1 -701 647 432 2321 95 3 3 chr2 172502780 172503084 -78184770 - AluSq SINE Alu -9 304 1 243 0 0 0 chr2 172506134 172506161 -78181693 + (TG)n Simple_repeat Simple_repeat 2 28 0 1887 159 10 3 chr2 172507186 172507488 -78180366 + AluJb SINE Alu 1 304 -8 315 71 0 0 chr2 172507605 172507647 -78180207 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1158 136 0 0 chr2 172507978 172508140 -78179714 - AluSg/x SINE Alu -13 299 138 21 0 0 0 chr2 172508221 172508242 -78179612 + AT_rich Low_complexity Low_complexity 1 21 0 272 378 113 7 chr2 172508657 172508808 -78179046 - L2 LINE L2 -9 3263 3097 231 250 18 0 chr2 172509061 172509117 -78178737 - MER5B DNA MER1_type 0 178 122 227 148 185 19 chr2 172509574 172509628 -78178226 - MER5A DNA MER1_type -81 108 46 2400 84 3 0 chr2 172509637 172509933 -78177921 - AluSg SINE Alu -12 298 2 233 263 120 69 chr2 172509945 172510120 -78177734 - L2 LINE L2 -778 2536 2353 758 272 33 5 chr2 172510196 172510380 -78177474 + Charlie1 DNA MER1_type 2 190 -2571 541 170 9 18 chr2 172510432 172510544 -78177310 + Charlie1 DNA MER1_type 2638 2748 -13 324 323 169 15 chr2 172510571 172510766 -78177088 - L2 LINE L2 -1357 1957 1733 2235 86 3 46 chr2 172511249 172511574 -78176280 - AluY SINE Alu 0 311 1 1299 226 56 48 chr2 172511663 172511974 -78175880 - MSTD LTR MaLR 0 396 80 1986 129 4 0 chr2 172511974 172512253 -78175601 - AluSq SINE Alu -30 283 4 1299 226 56 48 chr2 172512253 172512334 -78175520 - MSTD LTR MaLR -316 80 1 23 33 0 0 chr2 172513108 172513138 -78174716 + AT_rich Low_complexity Low_complexity 1 30 0 1953 163 3 0 chr2 172513535 172513841 -78174013 - AluSx SINE Alu 0 312 6 2251 112 0 0 chr2 172514001 172514305 -78173549 + AluSx SINE Alu 1 304 -8 6996 136 39 19 chr2 172514896 172515245 -78172609 + L1MA3 LINE L1 4065 4406 -1899 2105 100 7 39 chr2 172515245 172515410 -78172444 - AluSx SINE Alu -12 300 148 2061 124 0 33 chr2 172515410 172515716 -78172138 - AluSq SINE Alu -17 296 1 2105 100 7 39 chr2 172515716 172515860 -78171994 - AluSx SINE Alu -164 148 1 6996 136 39 19 chr2 172515860 172516605 -78171249 + L1MA3 LINE L1 4406 5135 -1170 2339 82 0 0 chr2 172516605 172516897 -78170957 + AluY SINE Alu 1 292 -19 6996 136 39 19 chr2 172516897 172518001 -78169853 + L1MA3 LINE L1 5135 6305 0 209 277 21 0 chr2 172518107 172518154 -78169700 + L2 LINE L2 3214 3261 -11 519 139 41 33 chr2 172518253 172518375 -78169479 - Charlie1 DNA MER1_type -1 2760 2638 466 209 64 0 chr2 172518385 172518495 -78169359 - Charlie1 DNA MER1_type -2536 225 109 765 208 82 39 chr2 172518555 172518762 -78169092 - MER20 DNA MER1_type 0 219 4 371 275 50 33 chr2 172518853 172518973 -78168881 - MIR SINE MIR -135 127 6 304 337 72 30 chr2 172519514 172519680 -78168174 - MER5B DNA MER1_type -5 173 1 591 209 18 0 chr2 172519724 172519834 -78168020 + FLAM_A SINE Alu 2 113 -29 2262 115 0 6 chr2 172519834 172520147 -78167707 - AluSq SINE Alu -2 311 1 2621 86 3 27 chr2 172520205 172520578 -78167276 + L1PA7 LINE L1 5790 6153 -1 329 316 34 78 chr2 172520640 172520731 -78167123 + L1ME LINE L1 5517 5610 -511 2318 90 0 7 chr2 172520731 172521031 -78166823 + AluY SINE Alu 1 298 -13 329 316 34 78 chr2 172521031 172521145 -78166709 + L1ME LINE L1 5610 5713 -408 21 36 0 0 chr2 172521956 172521984 -78165870 + AT_rich Low_complexity Low_complexity 1 28 0 2410 63 3 3 chr2 172522355 172522657 -78165197 + AluY SINE Alu 1 302 -9 434 205 39 63 chr2 172524306 172524433 -78163421 - MER103 DNA DNA -10 156 33 2057 132 0 0 chr2 172524833 172525128 -78162726 - AluSx SINE Alu -17 295 1 298 204 31 43 chr2 172525466 172525561 -78162293 + MIR SINE MIR 21 107 -102 191 300 29 14 chr2 172525912 172525982 -78161872 - L2 LINE L2 0 3313 3243 1379 219 56 12 chr2 172526168 172526492 -78161362 - MER58B DNA MER1_type 0 341 4 2141 117 27 18 chr2 172528202 172528536 -78159318 + MER1B DNA MER1_type 1 337 0 277 173 0 19 chr2 172529180 172529232 -78158622 + L2 LINE L2 3263 3313 0 277 250 112 60 chr2 172530228 172530344 -78157510 - MIR SINE MIR -46 216 95 245 111 185 56 chr2 172530347 172530401 -78157453 + MER85 DNA T2_type 20 80 -59 319 281 85 0 chr2 172530764 172530846 -78157008 - L2 LINE L2 -10 3303 3215 335 235 245 0 chr2 172532759 172532857 -78154997 + L2 LINE L2 3189 3310 -3 29 47 0 0 chr2 172532970 172533013 -78154841 + AT_rich Low_complexity Low_complexity 1 43 0 1265 137 114 8 chr2 172533780 172534035 -78153819 + L1MA8 LINE L1 6007 6288 -3 2247 102 0 0 chr2 172534531 172534824 -78153030 + AluSc SINE Alu 1 293 -16 543 287 17 33 chr2 172535147 172535328 -78152526 - MER5B DNA MER1_type 0 178 1 795 281 80 11 chr2 172535524 172535901 -78151953 - L1ME3A LINE L1 -203 5967 5565 1511 171 45 4 chr2 172535935 172536204 -78151650 - AluJo SINE Alu -32 280 1 414 275 66 14 chr2 172536242 172536453 -78151401 - L1ME3A LINE L1 -1163 4983 4762 514 292 135 43 chr2 172536490 172536905 -78150949 - MLT1J LTR MaLR -19 492 40 353 292 49 0 chr2 172537100 172537223 -78150631 - L1MEc LINE L1 -4315 1901 1525 802 221 32 0 chr2 172537233 172537391 -78150463 + MER5A DNA MER1_type 4 166 -23 391 298 57 14 chr2 172537397 172537538 -78150316 - MLT1L LTR MaLR -466 149 3 1618 130 18 11 chr2 172538893 172539169 -78148685 - L1PA16 LINE L1 -1 6165 5888 2170 106 0 13 chr2 172539946 172540249 -78147605 + AluSx SINE Alu 4 302 -10 180 194 28 0 chr2 172540271 172540307 -78147547 - L2 LINE L2 -5 3308 3272 329 292 9 71 chr2 172541389 172541502 -78146352 - L2 LINE L2 -5 3267 3162 182 366 28 14 chr2 172541625 172541696 -78146158 - L2 LINE L2 -211 3061 2990 1851 131 62 3 chr2 172542679 172542970 -78144884 + AluSq SINE Alu 3 310 -3 597 333 141 37 chr2 172543146 172543735 -78144119 + L2 LINE L2 1705 2354 -960 773 174 0 7 chr2 172543908 172544052 -78143802 - FLAM_C SINE Alu 0 143 1 756 152 7 51 chr2 172544313 172544451 -78143403 + FLAM_C SINE Alu 1 132 -1 311 343 53 74 chr2 172544536 172544930 -78142924 + L2 LINE L2 2554 2939 -375 259 258 65 0 chr2 172545559 172545621 -78142233 + L2 LINE L2 3226 3291 -22 1661 176 20 10 chr2 172545646 172545947 -78141907 + AluJo SINE Alu 1 304 -8 1901 135 30 30 chr2 172546439 172546773 -78141081 - MER1B DNA MER1_type 0 337 4 193 334 203 3 chr2 172546803 172546965 -78140889 + MIR SINE MIR 38 234 -28 21 36 0 0 chr2 172547287 172547315 -78140539 + AT_rich Low_complexity Low_complexity 1 28 0 2025 137 3 19 chr2 172547315 172547630 -78140224 + AluJb SINE Alu 1 310 -2 1091 154 85 53 chr2 172547672 172547919 -78139935 - L1MC1 LINE L1 0 6333 6079 308 216 196 0 chr2 172548325 172548471 -78139383 - L1MEc LINE L1 -4562 2019 1801 496 207 27 81 chr2 172548502 172548634 -78139220 + L1MEc LINE L1 1273 1390 -5006 1818 155 26 3 chr2 172548634 172548937 -78138917 + AluJb SINE Alu 1 310 -2 496 207 27 81 chr2 172548937 172549026 -78138828 + L1MEc LINE L1 1390 1482 -4914 1812 255 124 76 chr2 172549047 172550663 -78137191 + L1MEc LINE L1 2368 4061 -2154 2324 88 3 0 chr2 172550735 172551032 -78136822 - AluSp SINE Alu -15 298 1 1028 266 57 55 chr2 172551301 172551703 -78136151 - MLT1D-int LTR MaLR -14 1357 955 1512 124 0 5 chr2 172551819 172552029 -78135825 - AluSq SINE Alu -104 209 1 489 234 28 0 chr2 172552036 172552143 -78135711 - MLT1D-int LTR MaLR -1261 110 1 1470 224 94 36 chr2 172552143 172552620 -78135234 - MLT1D LTR MaLR 0 505 1 2149 93 68 71 chr2 172552643 172552838 -78135016 - THE1B LTR MaLR 0 364 169 2249 85 3 3 chr2 172552838 172553133 -78134721 - AluSq SINE Alu -18 295 1 2149 93 68 71 chr2 172553133 172553302 -78134552 - THE1B LTR MaLR -195 169 1 3584 213 40 20 chr2 172553432 172554405 -78133449 - L1MB5 LINE L1 -1 6173 5220 2160 90 59 11 chr2 172554405 172554431 -78133423 - L1MA3 LINE L1 0 6305 6282 583 40 27 0 chr2 172554431 172554506 -78133348 + MADE1 DNA Mariner 1 77 -3 2160 90 59 11 chr2 172554506 172554833 -78133021 - L1MA3 LINE L1 -23 6282 5935 3584 213 40 20 chr2 172554833 172554963 -78132891 - L1MB5 LINE L1 -954 5220 5094 1928 140 7 0 chr2 172554963 172555266 -78132588 - AluSx SINE Alu 0 305 1 3584 213 40 20 chr2 172555266 172555551 -78132303 - L1MB5 LINE L1 -1080 5094 4760 2196 211 16 10 chr2 172555552 172556065 -78131789 - L1MB5 LINE L1 -1608 4538 4023 203 59 0 29 chr2 172556072 172556106 -78131748 + (TTG)n Simple_repeat Simple_repeat 2 34 0 999 131 14 0 chr2 172556115 172556260 -78131594 - AluSg/x SINE Alu -39 273 127 26 64 0 0 chr2 172556591 172556638 -78131216 + AT_rich Low_complexity Low_complexity 1 47 0 1854 138 4 4 chr2 172558146 172558422 -78129432 + AluSx SINE Alu 1 276 -36 578 256 0 0 chr2 172558564 172558681 -78129173 + FLAM_A SINE Alu 1 117 -16 763 129 0 0 chr2 172558728 172558844 -78129010 - FLAM_C SINE Alu -17 116 1 301 373 76 27 chr2 172558977 172559202 -78128652 + L2 LINE L2 2740 2975 -339 1837 150 24 0 chr2 172560024 172560311 -78127543 - AluSx SINE Alu -18 294 1 23 54 0 0 chr2 172563921 172563958 -78123896 + AT_rich Low_complexity Low_complexity 1 37 0 279 104 0 0 chr2 172564740 172564788 -78123066 + (TG)n Simple_repeat Simple_repeat 1 48 0 183 227 45 76 chr2 172565496 172565562 -78122292 + L3 LINE CR1 605 668 -909 360 0 0 0 chr2 172566065 172566105 -78121749 + (TG)n Simple_repeat Simple_repeat 2 41 0 1962 95 0 19 chr2 172566108 172566371 -78121483 - AluSg SINE Alu -49 261 4 639 123 189 16 chr2 172566624 172566746 -78121108 + FLAM_C SINE Alu 1 143 0 267 31 0 0 chr2 172567446 172567478 -78120376 + (TTGG)n Simple_repeat Simple_repeat 4 35 0 2176 114 7 0 chr2 172567626 172567932 -78119922 - AluSg SINE Alu -2 308 1 22 0 0 0 chr2 172568022 172568044 -78119810 + AT_rich Low_complexity Low_complexity 1 22 0 2041 132 0 13 chr2 172568112 172568416 -78119438 - AluSx SINE Alu -12 300 1 21 0 0 0 chr2 172569061 172569082 -78118772 + AT_rich Low_complexity Low_complexity 1 21 0 1185 178 109 74 chr2 172569836 172570174 -78117680 - MLT1A2 LTR MaLR -20 354 5 27 0 0 0 chr2 172571145 172571172 -78116682 + AT_rich Low_complexity Low_complexity 1 27 0 1729 162 30 0 chr2 172571758 172572023 -78115831 + AluJb SINE Alu 1 273 -39 2189 90 3 24 chr2 172572113 172572402 -78115452 - AluSp SINE Alu -30 283 1 363 78 0 0 chr2 172572455 172572506 -78115348 + (TG)n Simple_repeat Simple_repeat 1 51 0 23 78 0 0 chr2 172572589 172572640 -78115214 + AT_rich Low_complexity Low_complexity 1 51 0 426 20 0 0 chr2 172572729 172572780 -78115074 + (TG)n Simple_repeat Simple_repeat 2 52 0 1122 235 59 56 chr2 172573432 172573693 -78114161 + L2 LINE L2 2753 3012 -301 724 176 8 23 chr2 172573693 172573824 -78114030 + FLAM_A SINE Alu 1 129 -4 1122 235 59 56 chr2 172573824 172574043 -78113811 + L2 LINE L2 3012 3299 -14 1415 199 77 0 chr2 172574586 172574873 -78112981 + AluJb SINE Alu 1 309 -3 2042 92 66 0 chr2 172574879 172575151 -78112703 + AluSx SINE Alu 1 290 -22 1973 130 29 0 chr2 172575415 172575718 -78112136 + AluSg SINE Alu 1 311 0 595 221 62 0 chr2 172575793 172575938 -78111916 + MIR SINE MIR 64 217 -45 1101 136 72 76 chr2 172575941 172576177 -78111677 + MER46A DNA MER2_type 1 235 -1 29 28 0 0 chr2 172576235 172576271 -78111583 + AT_rich Low_complexity Low_complexity 1 36 0 1643 175 39 0 chr2 172576900 172577186 -78110668 + AluJo SINE Alu 3 299 -13 636 270 49 10 chr2 172578342 172578546 -78109308 + MIR SINE MIR 7 218 -44 1838 139 10 26 chr2 172578597 172578900 -78108954 + AluSx SINE Alu 13 310 -2 229 325 121 18 chr2 172578966 172579132 -78108722 + MIR3 SINE MIR 20 202 -6 228 234 0 16 chr2 172579868 172579932 -78107922 - MIR SINE MIR -33 229 167 437 200 134 69 chr2 172580357 172580647 -78107207 + L1MC5 LINE L1 7609 7917 -44 22 56 0 0 chr2 172582361 172582397 -78105457 + AT_rich Low_complexity Low_complexity 1 36 0 1382 182 104 0 chr2 172582459 172582728 -78105126 - AluJo SINE Alu -15 297 1 14514 123 90 37 chr2 172583773 172583929 -78103925 + Tigger2 DNA MER2_type 1 147 -2571 2163 102 3 50 chr2 172583929 172584251 -78103603 + AluSx SINE Alu 1 307 -5 14514 123 90 37 chr2 172584251 172584888 -78102966 + Tigger2 DNA MER2_type 147 749 -1969 2613 68 0 0 chr2 172584888 172585198 -78102656 - AluY SINE Alu 0 311 2 14514 123 90 37 chr2 172585198 172585249 -78102605 + Tigger2 DNA MER2_type 749 796 -1922 1722 163 0 32 chr2 172585249 172585562 -78102292 + AluJb SINE Alu 1 303 -9 14514 123 90 37 chr2 172585562 172585618 -78102236 + Tigger2 DNA MER2_type 796 848 -1870 2436 63 0 50 chr2 172585618 172585936 -78101918 + AluY SINE Alu 1 302 -9 14514 123 90 37 chr2 172585936 172586115 -78101739 + Tigger2 DNA MER2_type 848 1016 -1702 2039 98 18 4 chr2 172586115 172586391 -78101463 + AluSc SINE Alu 1 280 -29 189 0 0 0 chr2 172586398 172586419 -78101435 + (TGAA)n Simple_repeat Simple_repeat 4 24 0 14514 123 90 37 chr2 172586419 172587792 -78100062 + Tigger2 DNA MER2_type 1021 2320 -398 2237 102 7 10 chr2 172587792 172588096 -78099758 - AluSg SINE Alu -7 303 1 14514 123 90 37 chr2 172588096 172588145 -78099709 + Tigger2 DNA MER2_type 2320 2365 -353 1531 152 79 35 chr2 172588145 172588435 -78099419 + AluJb SINE Alu 1 303 -9 14514 123 90 37 chr2 172588435 172588501 -78099353 + Tigger2 DNA MER2_type 2365 2718 0 1631 188 11 0 chr2 172589126 172589413 -78098441 + AluJo SINE Alu 1 290 -22 520 90 11 22 chr2 172590068 172590157 -78097697 + (TAGA)n Simple_repeat Simple_repeat 1 88 0 1905 155 0 3 chr2 172591893 172592183 -78095671 + AluJb SINE Alu 1 289 -23 1854 156 3 0 chr2 172592190 172592491 -78095363 + AluJb SINE Alu 1 302 -10 37 62 0 0 chr2 172592804 172592869 -78094985 + AT_rich Low_complexity Low_complexity 1 65 0 939 201 113 48 chr2 172593344 172593637 -78094217 + L1ME3A LINE L1 5849 6160 -10 258 81 0 0 chr2 172594486 172594523 -78093331 + (T)n Simple_repeat Simple_repeat 1 37 0 1987 143 0 17 chr2 172597617 172597917 -78089937 + AluSx SINE Alu 1 295 -17 1711 124 113 0 chr2 172598320 172598586 -78089268 - AluJb SINE Alu -16 296 1 256 277 40 40 chr2 172598682 172598783 -78089071 + MIR SINE MIR 113 213 -49 188 301 39 29 chr2 172599134 172599237 -78088617 - MIR SINE MIR -86 176 73 1605 120 30 123 chr2 172599396 172599729 -78088125 - AluJb SINE Alu -10 302 1 2167 101 3 24 chr2 172600054 172600350 -78087504 + AluSp SINE Alu 2 291 -22 430 291 53 7 chr2 172600939 172601090 -78086764 + MIR SINE MIR 13 170 -92 180 0 0 0 chr2 172601658 172601678 -78086176 + (TA)n Simple_repeat Simple_repeat 2 21 0 2150 102 49 3 chr2 172601678 172601962 -78085892 - AluSg SINE Alu -13 297 1 1899 151 8 48 chr2 172602488 172602839 -78085015 + MER1B DNA MER1_type 1 337 0 833 102 16 24 chr2 172603225 172603352 -78084502 + FLAM_C SINE Alu 1 126 -17 234 231 0 0 chr2 172603720 172603772 -78084082 - MLT1J2 LTR MaLR -126 324 273 282 269 194 45 chr2 172604447 172604648 -78083206 - MIR SINE MIR 0 262 32 2714 70 122 5 chr2 172604805 172605206 -78082648 + LTR7 LTR ERV1 1 448 -2 26667 86 48 14 chr2 172605208 172609070 -78078784 + HERVH LTR ERV1 1 3993 -3720 4339 147 0 6 chr2 172609072 172609738 -78078116 + HERVH LTR ERV1 4488 5149 -2564 1435 128 18 0 chr2 172609737 172609955 -78077899 + HERVH LTR ERV1 5598 5819 -1894 * 2481 95 45 13 chr2 172609955 172610333 -78077521 + HERVH LTR ERV1 7324 7713 0 2714 77 120 2 chr2 172610333 172610734 -78077120 + LTR7 LTR ERV1 1 448 -2 1459 112 0 19 chr2 172610806 172611012 -78076842 - AluSg/x SINE Alu -17 295 94 2539 72 0 0 chr2 172611286 172611592 -78076262 - AluSq SINE Alu -7 306 1 195 129 0 0 chr2 172611621 172611652 -78076202 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1701 152 71 7 chr2 172611653 172611936 -78075918 - AluJb SINE Alu -11 301 1 389 250 16 62 chr2 172612947 172613075 -78074779 + MIR3 SINE MIR 47 168 -40 285 288 79 53 chr2 172613653 172613980 -78073874 + L2 LINE L2 2774 3106 -166 27 87 0 0 chr2 172614500 172614569 -78073285 + GC_rich Low_complexity Low_complexity 1 69 0 2349 68 20 0 chr2 172615831 172616125 -78071729 - AluSc SINE Alu -9 300 1 2376 83 0 3 chr2 172616222 172616534 -78071320 + AluY SINE Alu 1 311 0 2313 93 20 0 chr2 172616544 172616845 -78071009 + AluSx SINE Alu 1 307 -5 600 207 183 58 chr2 172617474 172617769 -78070085 - Charlie8 DNA MER1_type -2084 333 2 369 0 0 0 chr2 172618312 172618353 -78069501 + (TA)n Simple_repeat Simple_repeat 1 41 0 1706 114 167 9 chr2 172619256 172619580 -78068274 + THE1C LTR MaLR 1 375 0 1312 123 21 0 chr2 172619779 172619966 -78067888 - AluJo SINE Alu -77 235 45 1057 153 0 0 chr2 172620208 172620371 -78067483 + AluJb SINE Alu 143 305 -7 2076 121 0 40 chr2 172622977 172623299 -78064555 + AluJo SINE Alu 1 309 -3 2316 109 0 0 chr2 172623518 172623821 -78064033 - AluSx SINE Alu -9 303 1 2004 149 0 10 chr2 172624247 172624556 -78063298 + AluJb SINE Alu 1 306 -6 312 27 0 0 chr2 172624704 172624741 -78063113 + (GGA)n Simple_repeat Simple_repeat 1 37 0 204 40 0 0 chr2 172624741 172624766 -78063088 + (CAG)n Simple_repeat Simple_repeat 1 25 0 2153 115 0 7 chr2 172624800 172625088 -78062766 - AluSx SINE Alu -13 299 14 506 189 139 21 chr2 172625731 172625866 -78061988 - L1MD3 LINE L1 0 8042 7898 360 222 94 89 chr2 172627898 172628071 -78059783 - L2 LINE L2 -2 3311 3135 2309 115 3 0 chr2 172628071 172628376 -78059478 + AluSx SINE Alu 1 306 -6 360 222 94 89 chr2 172628376 172628405 -78059449 - L2 LINE L2 -178 3135 3108 2453 65 0 3 chr2 172628930 172629221 -78058633 + AluSq SINE Alu 1 290 -23 1932 108 19 60 chr2 172629222 172629538 -78058316 + AluSx SINE Alu 1 303 -9 194 286 54 95 chr2 172629589 172629757 -78058097 + L3 LINE CR1 1404 1564 -13 471 208 8 16 chr2 172629798 172629923 -78057931 + L1MB8 LINE L1 6055 6178 0 318 110 137 27 chr2 172629963 172630036 -78057818 + L1MC5 LINE L1 7831 7911 -50 635 197 23 0 chr2 172630234 172630366 -78057488 + AluJo SINE Alu 2 136 -176 709 169 18 24 chr2 172630379 172630545 -78057309 + L1MB8 LINE L1 6012 6176 -2 2153 121 7 3 chr2 172630616 172630914 -78056940 + AluSq SINE Alu 1 299 -14 52 26 0 13 chr2 172631224 172631287 -78056567 + AT_rich Low_complexity Low_complexity 1 64 -12 1678 145 22 33 chr2 172631287 172631563 -78056291 - AluJb SINE Alu -39 273 1 52 26 0 13 chr2 172631563 172631576 -78056278 + AT_rich Low_complexity Low_complexity 64 76 0 438 285 89 0 chr2 172633155 172633313 -78054541 + L2 LINE L2 2200 2371 -943 345 91 0 0 chr2 172633621 172633665 -78054189 - LTR56 LTR ERV1 -53 392 349 541 253 165 8 chr2 172633717 172633966 -78053888 + L2 LINE L2 3024 3311 -2 250 345 34 0 chr2 172634444 172634563 -78053291 + LTR67 LTR ERVL 435 557 0 270 0 0 0 chr2 172634806 172634836 -78053018 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1681 172 0 0 chr2 172634851 172635118 -78052736 - AluJb SINE Alu -45 267 1 1345 210 49 3 chr2 172635216 172635502 -78052352 + AluJo SINE Alu 1 299 -13 234 222 74 37 chr2 172636913 172636994 -78050860 - MER5B DNA MER1_type 0 178 95 227 215 65 43 chr2 172636914 172637007 -78050847 + MER5A DNA MER1_type 14 108 -81 * 2073 154 0 7 chr2 172637187 172637492 -78050362 - AluJb SINE Alu -9 303 1 24 0 0 0 chr2 172638012 172638036 -78049818 + AT_rich Low_complexity Low_complexity 1 24 0 28 48 0 0 chr2 172638154 172638196 -78049658 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr2 172639512 172639542 -78048312 + AT_rich Low_complexity Low_complexity 1 30 0 1934 155 0 10 chr2 172640050 172640353 -78047501 - AluJb SINE Alu -12 300 1 2062 116 0 29 chr2 172641232 172641542 -78046312 - AluSx SINE Alu -11 301 1 1564 176 37 4 chr2 172641889 172642186 -78045668 + AluJo SINE Alu 1 306 0 968 205 3 123 chr2 172642670 172643012 -78044842 - AluJo SINE Alu 0 302 2 241 167 0 67 chr2 172643091 172643151 -78044703 + MER117 DNA MER1_type 11 66 -131 1816 172 0 10 chr2 172644216 172644518 -78043336 + AluJo SINE Alu 1 299 -13 535 323 18 13 chr2 172644553 172644779 -78043075 + MIR SINE MIR 26 252 -10 2179 242 72 34 chr2 172644961 172645263 -78042591 + L1ME3A LINE L1 4979 5268 -902 3917 157 49 10 chr2 172645263 172645982 -78041872 + L1MB7 LINE L1 5428 6174 -10 2179 242 72 34 chr2 172645982 172646637 -78041217 + L1ME3A LINE L1 5268 5975 -195 314 169 108 15 chr2 172646690 172646755 -78041099 + L1ME3A LINE L1 6066 6136 -34 21 36 0 0 chr2 172646919 172646947 -78040907 + AT_rich Low_complexity Low_complexity 1 28 0 253 258 211 37 chr2 172647263 172647453 -78040401 - MER112 DNA MER1_type 0 260 38 1244 193 118 16 chr2 172648437 172648743 -78039111 - MER44D DNA MER2_type -1 608 2 329 229 10 21 chr2 172649138 172649183 -78038671 + MIR3 SINE MIR 76 120 -88 2050 106 11 7 chr2 172649183 172649467 -78038387 - AluSq SINE Alu -14 299 15 329 229 10 21 chr2 172649467 172649517 -78038337 + MIR3 SINE MIR 120 170 -38 265 314 38 0 chr2 172649975 172650080 -78037774 - MIR SINE MIR -6 256 148 252 300 42 34 chr2 172650162 172650284 -78037570 - MIR SINE MIR -65 143 44 699 229 7 0 chr2 172650352 172650492 -78037362 - FLAM_C SINE Alu 0 143 3 214 200 0 22 chr2 172650494 172650539 -78037315 + CT-rich Low_complexity Low_complexity 2 45 0 614 213 39 0 chr2 172650541 172650668 -78037186 - FLAM_A SINE Alu 0 133 2 1489 197 30 0 chr2 172650702 172650971 -78036883 + AluJb SINE Alu 12 288 -24 2357 82 3 0 chr2 172650971 172651265 -78036589 - AluSx SINE Alu -17 295 1 31 44 0 0 chr2 172651265 172651310 -78036544 + AT_rich Low_complexity Low_complexity 1 45 0 417 147 13 13 chr2 172651314 172651389 -78036465 - AluJo/FRAM SINE Alu -42 270 196 516 189 55 63 chr2 172651392 172651519 -78036335 - FLAM_A SINE Alu -7 126 1 1677 186 27 3 chr2 172651672 172651967 -78035887 + AluJo SINE Alu 1 302 -10 1894 135 26 10 chr2 172652316 172652619 -78035235 + AluJb SINE Alu 1 308 -4 2092 139 0 0 chr2 172652638 172652932 -78034922 + AluSx SINE Alu 2 295 -17 2036 132 0 0 chr2 172653154 172653469 -78034385 + AluSx SINE Alu 1 312 0 2089 79 57 4 chr2 172653635 172653944 -78033910 + AluSq SINE Alu 5 313 0 278 275 152 14 chr2 172655447 172655585 -78032269 + L1ME4a LINE L1 5964 6120 -1 228 339 68 11 chr2 172655716 172655893 -78031961 + L1ME4a LINE L1 5712 5898 -1910 2256 103 7 3 chr2 172655954 172656246 -78031608 - AluSq SINE Alu -20 293 1 236 270 45 0 chr2 172659872 172659961 -78027893 + L1MC5 LINE L1 7349 7441 -520 246 186 114 84 chr2 172660190 172660357 -78027497 + L1ME4a LINE L1 5881 6052 -69 31 0 0 0 chr2 172660404 172660435 -78027419 + AT_rich Low_complexity Low_complexity 1 31 0 249 318 6 89 chr2 172660835 172661014 -78026840 + L2 LINE L2 2869 3032 -240 691 133 16 8 chr2 172661144 172661272 -78026582 + CT-rich Low_complexity Low_complexity 4 132 0 1834 157 13 7 chr2 172661307 172661612 -78026242 - AluJb SINE Alu -5 307 1 288 111 0 0 chr2 172662267 172662312 -78025542 + (TCCCC)n Simple_repeat Simple_repeat 2 46 0 1656 169 58 0 chr2 172662328 172662589 -78025265 - AluSx SINE Alu -36 276 1 1108 149 154 0 chr2 172662648 172662849 -78025005 - MER46A DNA MER2_type -4 232 1 423 248 60 0 chr2 172663231 172663348 -78024506 + L2 LINE L2 3190 3313 0 5799 172 103 133 chr2 172663368 172665176 -78022678 + MER52A LTR ERV1 1 1755 0 282 260 260 0 chr2 172665199 172665345 -78022509 + MER5A DNA MER1_type 1 184 -5 792 118 0 8 chr2 172665595 172665714 -78022140 - FLAM_C SINE Alu -15 118 1 2866 194 52 119 chr2 172665714 172666048 -78021806 - L1MC3 LINE L1 -24 7761 7406 2061 139 3 7 chr2 172666048 172666357 -78021497 - AluSx SINE Alu -4 308 1 2866 194 52 119 chr2 172666357 172666637 -78021217 - L1MC3 LINE L1 -379 7406 7109 236 121 35 86 chr2 172666637 172666695 -78021159 - MLT1F1 LTR MaLR -491 76 22 2027 146 7 3 chr2 172666697 172666999 -78020855 + AluJb SINE Alu 5 307 -5 1842 124 7 21 chr2 172666999 172667282 -78020572 + AluSg SINE Alu 30 308 -2 2866 194 52 119 chr2 172667282 172667572 -78020282 - L1MC3 LINE L1 -676 7109 6879 534 160 10 0 chr2 172667572 172667672 -78020182 - L1MB3 LINE L1 -7 6176 6076 2866 194 52 119 chr2 172667672 172667826 -78020028 - L1MC3 LINE L1 -906 6879 6716 1545 213 23 6 chr2 172667823 172668171 -78019683 - L1M4 LINE L1 -937 5209 4856 * 24 0 0 0 chr2 172668278 172668302 -78019552 + AT_rich Low_complexity Low_complexity 1 24 0 2159 105 0 7 chr2 172668302 172668587 -78019267 - AluSc SINE Alu -26 283 1 180 0 0 0 chr2 172668652 172668672 -78019182 + (T)n Simple_repeat Simple_repeat 1 20 0 3301 145 60 7 chr2 172668935 172669514 -78018340 + MER4B LTR ERV1 1 610 0 3889 192 87 68 chr2 172669977 172671064 -78016790 + LTR28 LTR ERV1 2 636 0 409 186 10 82 chr2 172671195 172671233 -78016621 - LTR26B LTR ERV1 0 531 492 8263 51 13 3 chr2 172671233 172672229 -78015625 - LTR13 LTR ERVK -1 1006 1 409 186 10 82 chr2 172672229 172672287 -78015567 - LTR26B LTR ERV1 -39 492 442 4223 135 32 55 chr2 172672287 172673747 -78014107 + LTR12 LTR ERV1 35 2438 0 2578 133 61 21 chr2 172673750 172674178 -78013676 - LTR26B LTR ERV1 -86 445 1 496 314 44 9 chr2 172674182 172674408 -78013446 - MER102b DNA MER1_type 0 341 108 333 99 19 52 chr2 172674427 172674638 -78013216 + AluSx SINE Alu 1 293 -9 1266 191 20 29 chr2 172674640 172674886 -78012968 + L1ME LINE L1 5468 5711 -455 855 204 106 79 chr2 172675366 172675407 -78012447 + L1M4 LINE L1 4865 4903 -1243 2273 99 7 0 chr2 172675407 172675701 -78012153 + AluSg SINE Alu 1 296 -14 855 204 106 79 chr2 172675701 172676027 -78011827 + L1M4 LINE L1 4903 5242 -904 4039 188 73 42 chr2 172676123 172676491 -78011363 + L1MB5 LINE L1 4347 4702 -1472 1323 199 125 8 chr2 172676491 172676747 -78011107 + AluJo SINE Alu 2 287 -25 4039 188 73 42 chr2 172676747 172677274 -78010580 + L1MB5 LINE L1 4702 5211 -963 1757 177 16 32 chr2 172677274 172677590 -78010264 + AluJo SINE Alu 1 311 -1 4039 188 73 42 chr2 172677590 172678016 -78009838 + L1MB5 LINE L1 5211 5623 -551 2025 117 0 52 chr2 172678016 172678325 -78009529 + AluSx SINE Alu 1 293 -19 4039 188 73 42 chr2 172678325 172678736 -78009118 + L1MB5 LINE L1 5623 6138 -36 22 103 0 0 chr2 172678740 172678818 -78009036 + AT_rich Low_complexity Low_complexity 1 78 0 2184 86 7 17 chr2 172678842 172679134 -78008720 - AluSg1 SINE Alu -20 289 1 1981 136 7 0 chr2 172679332 172679626 -78008228 - AluJb SINE Alu -16 296 1 6553 69 3 9 chr2 172679716 172680573 -78007281 - L1PA10 LINE L1 0 6168 5317 1128 151 22 0 chr2 172680569 172680754 -78007100 + L1P LINE L1 2690 2878 -3268 * 931 191 9 9 chr2 172681657 172681872 -78005982 + L1M4 LINE L1 4987 5201 -945 1920 168 0 3 chr2 172682712 172683010 -78004844 - AluSx SINE Alu -15 297 1 21 57 0 0 chr2 172683079 172683114 -78004740 + AT_rich Low_complexity Low_complexity 1 35 0 486 296 89 79 chr2 172683461 172683499 -78004355 - L1M4 LINE L1 -2060 4086 4050 1636 158 6 87 chr2 172683499 172683822 -78004032 - AluJb SINE Alu -15 297 1 486 296 89 79 chr2 172683822 172684233 -78003621 - L1M4 LINE L1 -2096 4050 3637 305 248 48 57 chr2 172684257 172684362 -78003492 + L2 LINE L2 3209 3312 -1 216 67 0 0 chr2 172684370 172684400 -78003454 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 326 304 133 0 chr2 172684571 172684706 -78003148 + L1ME3A LINE L1 5794 5946 -224 2384 106 3 0 chr2 172684709 172685020 -78002834 + AluSx SINE Alu 1 312 0 1784 160 0 21 chr2 172685046 172685333 -78002521 + AluJo SINE Alu 15 295 -17 432 246 142 22 chr2 172685421 172685555 -78002299 + LTR33A LTR ERVL 71 220 -303 723 230 97 31 chr2 172685618 172685814 -78002040 - LTR33 LTR ERVL -288 233 25 430 219 0 38 chr2 172685859 172685964 -78001890 + LTR33A LTR ERVL 420 520 -3 297 358 36 36 chr2 172686269 172686434 -78001420 + MIR SINE MIR 47 211 -51 1843 137 23 17 chr2 172686607 172686906 -78000948 - AluJb SINE Alu -11 301 1 2592 46 0 0 chr2 172686937 172687240 -78000614 + AluY SINE Alu 1 303 -8 645 230 0 37 chr2 172687397 172687532 -78000322 + FLAM_A SINE Alu 1 130 -3 750 280 67 14 chr2 172687535 172687892 -77999962 - L1ME4a LINE L1 -195 5926 5551 1524 143 179 0 chr2 172688464 172688715 -77999139 + AluJb SINE Alu 2 297 -5 2060 104 0 87 chr2 172689506 172689841 -77998013 - AluSq SINE Alu -7 306 1 29 31 0 31 chr2 172689956 172689979 -77997875 + AT_rich Low_complexity Low_complexity 1 23 -40 2194 117 0 0 chr2 172689979 172690270 -77997584 - AluSq SINE Alu -22 291 1 29 31 0 31 chr2 172690270 172690293 -77997561 + AT_rich Low_complexity Low_complexity 23 47 -16 2260 90 0 23 chr2 172690293 172690594 -77997260 + AluSp SINE Alu 1 294 -19 29 31 0 31 chr2 172690594 172690611 -77997243 + AT_rich Low_complexity Low_complexity 47 63 0 743 207 16 31 chr2 172690721 172690914 -77996940 - HsTC2 DNA Tc2 0 1899 1710 673 218 91 10 chr2 172690910 172691164 -77996690 - HsTC2 DNA Tc2 -1578 320 1 * 932 232 43 4 chr2 172691621 172691854 -77996000 - MIR SINE MIR -19 243 2 518 244 123 83 chr2 172693797 172693977 -77993877 + L1ME4a LINE L1 5407 5579 -542 2114 125 3 6 chr2 172693977 172694288 -77993566 + AluJb SINE Alu 1 310 -2 518 244 123 83 chr2 172694288 172694631 -77993223 + L1ME4a LINE L1 5579 5969 -152 800 183 8 0 chr2 172694657 172694783 -77993071 - FLAM_C SINE Alu -16 127 1 301 220 175 30 chr2 172694784 172694984 -77992870 + L1ME4a LINE L1 5850 6078 -43 1246 155 22 13 chr2 172695014 172695240 -77992614 + L1MA9 LINE L1 6085 6312 0 317 311 30 55 chr2 172695304 172695468 -77992386 - MIR3 SINE MIR -3 205 46 25 0 0 0 chr2 172696351 172696376 -77991478 + AT_rich Low_complexity Low_complexity 1 25 0 605 245 92 66 chr2 172696482 172696755 -77991099 - MLT1J LTR MaLR 0 511 232 249 330 119 0 chr2 172697148 172697266 -77990588 - L3b LINE CR1 -168 1415 1284 21 0 0 0 chr2 172697730 172697751 -77990103 + AT_rich Low_complexity Low_complexity 1 21 0 513 325 0 0 chr2 172697780 172697900 -77989954 + MIR SINE MIR 24 143 -119 1771 136 0 0 chr2 172698213 172698455 -77989399 - AluSx SINE Alu -32 280 39 22 0 0 0 chr2 172698470 172698492 -77989362 + AT_rich Low_complexity Low_complexity 1 22 0 349 282 128 0 chr2 172698617 172698734 -77989120 - MER5B DNA MER1_type -1 177 46 494 289 13 19 chr2 172698787 172698943 -77988911 - MER5B DNA MER1_type -23 155 1 386 313 141 10 chr2 172749082 172749274 -77938580 - L1MC/D LINE L1 -2182 5626 5410 930 320 109 8 chr2 172749296 172749789 -77938065 - L2 LINE L2 0 3313 2773 305 138 0 17 chr2 172749820 172749878 -77937976 + (TCCC)n Simple_repeat Simple_repeat 2 58 0 1928 145 14 0 chr2 172749878 172750175 -77937679 - AluSx SINE Alu -3 309 9 381 265 73 7 chr2 172750184 172750335 -77937519 - L2 LINE L2 -537 2777 2617 411 236 207 0 chr2 172750880 172751020 -77936834 - MER5A DNA MER1_type -12 177 9 336 375 82 4 chr2 172751029 172751129 -77936725 + L3 LINE CR1 495 586 -991 1580 193 44 3 chr2 172751129 172751425 -77936429 - AluJo SINE Alu -4 308 1 336 375 82 4 chr2 172751425 172751567 -77936287 + L3 LINE CR1 586 756 -821 238 255 0 75 chr2 172751632 172751726 -77936128 + MIR SINE MIR 61 147 -115 524 241 217 98 chr2 172751726 172752183 -77935671 - MLT1K LTR MaLR -2 586 76 5213 126 17 15 chr2 172752284 172753101 -77934753 - L1PA16 LINE L1 -1 6165 5347 2182 210 54 24 chr2 172754989 172755038 -77932816 - MLT1F1 LTR MaLR -16 551 505 2271 122 0 0 chr2 172755038 172755349 -77932505 + AluSx SINE Alu 1 311 -1 2182 210 54 24 chr2 172755349 172755833 -77932021 - MLT1F1 LTR MaLR -62 505 2 1281 113 5 15 chr2 172755988 172756191 -77931663 + L1PB1 LINE L1 5951 6151 0 853 69 0 58 chr2 172756661 172756721 -77931133 + (TTCCC)n Simple_repeat Simple_repeat 1 219 0 853 69 0 58 chr2 172756721 172756894 -77930960 + (TTCCC)n Simple_repeat Simple_repeat 2 164 0 1723 167 39 23 chr2 172756927 172757233 -77930621 - AluJo SINE Alu -1 311 1 684 242 81 5 chr2 172759270 172759493 -77928361 - LTR16C LTR ERVL 0 491 252 2298 110 10 0 chr2 172759529 172759877 -77927977 - AluSx SINE Alu 0 351 1 1677 167 11 14 chr2 172759879 172760161 -77927693 - AluJb SINE Alu -16 296 16 1654 157 31 89 chr2 172760254 172760430 -77927424 + MLT1B LTR MaLR 1 186 -204 2413 86 0 10 chr2 172760430 172760732 -77927122 + AluSq SINE Alu 1 299 -14 1654 157 31 89 chr2 172760732 172760969 -77926885 + MLT1B LTR MaLR 186 390 0 1689 146 31 0 chr2 172761611 172761871 -77925983 + AluJo SINE Alu 1 268 -44 191 286 18 0 chr2 172762255 172762311 -77925543 - L3 LINE CR1 -23 1554 1498 773 203 106 23 chr2 172762387 172762604 -77925250 + MIR SINE MIR 28 262 0 545 312 132 51 chr2 172762617 172763110 -77924744 - L3 LINE CR1 -198 1379 847 984 161 12 0 chr2 172763222 172763384 -77924470 - FRAM SINE Alu 0 176 13 1389 183 12 16 chr2 172764595 172764847 -77923007 - AluJb SINE Alu -23 289 39 1140 251 148 43 chr2 172764930 172765237 -77922617 - MLT1E2 LTR MaLR -1 625 251 2591 47 3 0 chr2 172765237 172765535 -77922319 - AluY SINE Alu -12 299 1 1140 251 148 43 chr2 172765535 172765693 -77922161 - MLT1E2 LTR MaLR -375 251 111 252 204 41 61 chr2 172765609 172765707 -77922147 - MLT2C1 LTR ERVL -192 205 110 * 196 151 19 38 chr2 172766631 172766684 -77921170 + CT-rich Low_complexity Low_complexity 1 52 0 845 126 0 0 chr2 172766949 172767060 -77920794 - FLAM_C SINE Alu -21 122 12 1369 146 4 17 chr2 172767257 172767496 -77920358 + L1MA7 LINE L1 6056 6291 0 1996 151 3 7 chr2 172767976 172768281 -77919573 + AluJo SINE Alu 1 304 -8 1962 91 7 101 chr2 172768284 172768592 -77919262 + AluSx SINE Alu 1 279 -33 2418 88 0 0 chr2 172769126 172769423 -77918431 + AluSx SINE Alu 1 297 -15 288 0 0 0 chr2 172769437 172769469 -77918385 + (CACCC)n Simple_repeat Simple_repeat 4 35 0 590 90 0 0 chr2 172769662 172769740 -77918114 - MSTB LTR MaLR -348 78 1 918 112 24 0 chr2 172769769 172769894 -77917960 - MSTB LTR MaLR -27 399 272 535 345 68 17 chr2 172769936 172770171 -77917683 - MLT1K LTR MaLR -339 249 3 538 271 62 60 chr2 172770911 172771180 -77916674 + L1MEc LINE L1 2043 2310 -3905 1810 137 88 0 chr2 172771180 172771465 -77916389 + AluJo SINE Alu 3 312 0 538 271 62 60 chr2 172771465 172771775 -77916079 + L1MEc LINE L1 2310 2597 -3618 * 735 252 63 75 chr2 172771747 172771945 -77915909 + L1MEc LINE L1 2973 3172 -3043 2326 78 0 38 chr2 172771945 172772264 -77915590 + AluY SINE Alu 1 307 -4 735 252 63 75 chr2 172772264 172772624 -77915230 + L1MEc LINE L1 3172 3524 -2691 1051 255 74 104 chr2 172772639 172773254 -77914600 + L1MEc LINE L1 3930 4515 -1700 1916 156 3 3 chr2 172773254 172773549 -77914305 + AluJb SINE Alu 5 299 -13 1051 255 74 104 chr2 172773549 172773756 -77914098 + L1MEc LINE L1 4515 4727 -1488 931 274 81 25 chr2 172773797 172774644 -77913210 + L1MEc LINE L1 5040 5942 -301 228 303 182 45 chr2 172774665 172774797 -77913057 + MER91A DNA MER1_type 42 191 -5 266 187 55 44 chr2 172774801 172774892 -77912962 + L1ME3A LINE L1 5929 6020 -219 2027 161 3 3 chr2 172775141 172775445 -77912409 + AluJo SINE Alu 1 304 -8 1697 169 6 10 chr2 172775473 172775786 -77912068 - AluJo SINE Alu 0 312 1 2841 208 47 36 chr2 172775993 172776737 -77911117 + L1ME1 LINE L1 5412 6163 -3 1932 95 4 0 chr2 172777394 172777658 -77910196 + AluSc SINE Alu 1 265 -44 222 37 0 0 chr2 172777664 172777691 -77910163 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 357 24 0 0 chr2 172777690 172777732 -77910122 + (CA)n Simple_repeat Simple_repeat 1 42 0 1729 176 0 0 chr2 172778050 172778334 -77909520 - AluJb SINE Alu -28 284 1 22 0 0 0 chr2 172778535 172778557 -77909297 + AT_rich Low_complexity Low_complexity 1 22 0 325 233 0 14 chr2 172780250 172780323 -77907531 + L2 LINE L2 3242 3313 0 440 304 0 9 chr2 172781753 172781868 -77905986 + L2 LINE L2 3184 3297 -16 930 133 0 0 chr2 172782072 172782200 -77905654 - FLAM_C SINE Alu -5 128 1 904 223 201 4 chr2 172782913 172783142 -77904712 + MER5C DNA MER1_type 3 294 -30 180 0 0 0 chr2 172783142 172783162 -77904692 + (CAA)n Simple_repeat Simple_repeat 2 21 0 904 223 201 4 chr2 172783162 172783201 -77904653 + MER5C DNA MER1_type 294 324 0 1987 142 7 0 chr2 172783768 172784071 -77903783 - AluSx SINE Alu -7 305 1 2035 121 10 0 chr2 172784156 172784461 -77903393 + AluSq SINE Alu 1 308 -5 23 0 0 0 chr2 172784591 172784614 -77903240 + AT_rich Low_complexity Low_complexity 1 23 0 2447 52 0 16 chr2 172784959 172785269 -77902585 + AluY SINE Alu 1 305 -6 200 288 45 0 chr2 172787156 172787222 -77900632 - MIR SINE MIR 0 262 194 681 279 149 0 chr2 172787225 172787426 -77900428 + MIR SINE MIR 2 232 -30 810 273 11 0 chr2 172787426 172787609 -77900245 - MIR SINE MIR -76 186 2 1888 133 23 3 chr2 172788626 172788926 -77898928 - AluSx SINE Alu -6 306 1 964 258 86 25 chr2 172789045 172789456 -77898398 + L2 LINE L2 2768 3215 -98 261 224 0 0 chr2 172789587 172789636 -77898218 + L2 LINE L2 3265 3313 0 198 0 0 0 chr2 172789951 172789973 -77897881 + (ATTG)n Simple_repeat Simple_repeat 3 24 0 851 134 0 0 chr2 172789978 172790097 -77897757 - FLAM_C SINE Alu -14 119 1 2230 100 7 0 chr2 172791138 172791448 -77896406 - AluSq SINE Alu -1 312 1 201 74 0 0 chr2 172792142 172792169 -77895685 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 771 228 0 73 chr2 172792169 172792401 -77895453 - L2 LINE L2 -13 3300 3086 1719 153 14 7 chr2 172792646 172792940 -77894914 - AluJb SINE Alu -16 296 1 1375 135 5 9 chr2 172795052 172795267 -77892587 + AluJo SINE Alu 99 312 0 420 339 58 23 chr2 172795788 172795959 -77891895 + L3b LINE CR1 1397 1573 -10 21 0 0 0 chr2 172796023 172796044 -77891810 + AT_rich Low_complexity Low_complexity 1 21 0 289 321 28 18 chr2 172797664 172797773 -77890081 - L2 LINE L2 -1 3271 3162 794 155 0 8 chr2 172798115 172798244 -77889610 - FLAM_C SINE Alu -13 130 3 346 256 118 67 chr2 172798753 172798991 -77888863 + MLT1J LTR MaLR 1 250 -261 242 93 0 23 chr2 172798991 172799034 -77888820 + (TCCC)n Simple_repeat Simple_repeat 4 45 0 354 264 13 88 chr2 172799034 172799193 -77888661 + MLT1J LTR MaLR 226 372 -139 450 296 38 8 chr2 172799479 172799611 -77888243 - MIR SINE MIR -74 188 53 2074 124 3 0 chr2 172800033 172800331 -77887523 - AluSx SINE Alu -13 299 1 181 176 59 59 chr2 172803303 172803354 -77884500 - L3b LINE CR1 -157 1426 1376 960 200 109 68 chr2 172804318 172804592 -77883262 + L1MC5 LINE L1 7448 7750 -211 2189 87 3 23 chr2 172804592 172804901 -77882953 + AluSq SINE Alu 1 303 -10 960 200 109 68 chr2 172804901 172805095 -77882759 + L1MC5 LINE L1 7750 7935 -26 1547 178 40 10 chr2 172805633 172805936 -77881918 - AluSx SINE Alu 0 312 1 226 273 0 0 chr2 172806414 172806480 -77881374 + MARNA DNA Mariner 215 280 -306 360 164 0 0 chr2 172806959 172807026 -77880828 + (TG)n Simple_repeat Simple_repeat 2 68 0 2171 187 47 9 chr2 172807075 172807525 -77880329 + MLT1C LTR MaLR 1 467 0 868 146 119 0 chr2 172807687 172807838 -77880016 - AluJb SINE Alu -19 293 125 319 221 44 71 chr2 172807838 172807951 -77879903 - L1MCa LINE L1 -4363 2063 1954 227 181 42 0 chr2 172807956 172808028 -77879826 + (TA)n Simple_repeat Simple_repeat 2 76 0 369 0 0 0 chr2 172808028 172808069 -77879785 + (CA)n Simple_repeat Simple_repeat 2 42 0 811 150 0 0 chr2 172808071 172808191 -77879663 - AluJb SINE Alu -192 120 1 269 342 51 0 chr2 172808919 172809036 -77878818 + L3 LINE CR1 1379 1501 -76 300 159 22 50 chr2 172810582 172810764 -77877090 + GA-rich Low_complexity Low_complexity 4 180 0 230 142 61 14 chr2 172810798 172810946 -77876908 + GA-rich Low_complexity Low_complexity 3 157 0 250 257 40 0 chr2 172810964 172811065 -77876789 + GA-rich Low_complexity Low_complexity 3 107 0 301 290 22 65 chr2 172811240 172811378 -77876476 - L2 LINE L2 -3 3310 3179 2234 100 0 3 chr2 172812501 172812801 -77875053 - AluSx SINE Alu -13 299 1 207 273 0 0 chr2 172813459 172813503 -77874351 + (TG)n Simple_repeat Simple_repeat 2 45 0 389 329 58 52 chr2 172813532 172813667 -77874187 + MER91A DNA MER1_type 5 143 -53 1698 157 0 30 chr2 172813667 172813972 -77873882 - AluJo SINE Alu -6 306 11 389 329 58 52 chr2 172813972 172813991 -77873863 + MER91A DNA MER1_type 143 160 -36 267 237 134 0 chr2 172814045 172814120 -77873734 - Charlie8 DNA MER1_type -183 147 55 282 56 0 0 chr2 172814120 172814156 -77873698 + (CA)n Simple_repeat Simple_repeat 2 37 0 267 237 134 0 chr2 172814156 172814177 -77873677 - Charlie8 DNA MER1_type -275 55 38 378 0 0 0 chr2 172814665 172814707 -77873147 + (TG)n Simple_repeat Simple_repeat 2 43 0 237 65 0 0 chr2 172815415 172815446 -77872408 + (TGGGGG)n Simple_repeat Simple_repeat 4 34 0 381 274 6 76 chr2 172818169 172818326 -77869528 - MIR SINE MIR -50 212 67 225 0 0 0 chr2 172819769 172819794 -77868060 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 239 224 20 0 chr2 172822540 172822589 -77865265 + C-rich Low_complexity Low_complexity 1 50 0 277 149 0 0 chr2 172824432 172824479 -77863375 - L2 LINE L2 -4 3309 3263 517 127 13 0 chr2 172826877 172826956 -77860898 - MSTB LTR MaLR -346 80 1 2023 142 0 7 chr2 172827011 172827320 -77860534 + AluSx SINE Alu 1 307 -5 269 267 95 9 chr2 172827596 172827712 -77860142 - MIR SINE MIR -67 141 16 224 303 114 53 chr2 172827726 172827858 -77859996 + MIR3 SINE MIR 60 199 -9 2203 85 14 7 chr2 172828114 172828407 -77859447 + AluSx SINE Alu 1 295 -17 1888 239 159 65 chr2 172828762 172828984 -77858870 + L2 LINE L2 2120 2320 -993 2268 116 3 0 chr2 172828984 172829295 -77858559 - AluSx SINE Alu 0 312 1 1888 239 159 65 chr2 172829295 172829951 -77857903 + L2 LINE L2 2320 3074 -239 282 146 0 0 chr2 172829951 172829999 -77857855 + Alu SINE Alu 1 48 -255 1541 167 3 61 chr2 172830000 172830294 -77857560 - AluJb SINE Alu -35 277 1 2213 123 3 0 chr2 172830497 172830799 -77857055 + AluSx SINE Alu 3 305 -7 2686 157 41 0 chr2 172831702 172832192 -77855662 + L1MB3 LINE L1 5672 6181 -2 260 250 21 52 chr2 172832727 172832823 -77855031 - MLT1L LTR MaLR -371 244 152 1866 159 3 3 chr2 172833316 172833612 -77854242 + AluJo SINE Alu 1 296 -16 766 286 67 8 chr2 172833852 172834090 -77853764 + MIR SINE MIR 10 261 -1 1139 148 62 29 chr2 172834121 172834331 -77853523 - AluJb SINE Alu -12 300 84 366 300 67 18 chr2 172834402 172834625 -77853229 + L2 LINE L2 1788 2021 -1293 528 277 122 22 chr2 172834640 172835037 -77852817 - MLT1L LTR MaLR -2 613 151 309 314 58 37 chr2 172835140 172835382 -77852472 + L2 LINE L2 2032 2278 -1036 2109 173 33 51 chr2 172835421 172835930 -77851924 + MLT1D LTR MaLR 6 505 0 547 274 63 38 chr2 172836215 172836452 -77851402 + MER112 DNA MER1_type 6 248 -12 263 357 166 21 chr2 172836469 172836970 -77850884 + L2 LINE L2 2686 3262 -10 2324 84 0 3 chr2 172836970 172837285 -77850569 + AluSq SINE Alu 1 314 0 1755 140 54 94 chr2 172838488 172838532 -77849322 + MSTB1 LTR MaLR 1 45 -387 1785 189 0 19 chr2 172838532 172838850 -77849004 + AluJo SINE Alu 1 312 0 1755 140 54 94 chr2 172838850 172839257 -77848597 + MSTB1 LTR MaLR 45 432 0 343 277 87 38 chr2 172839398 172839582 -77848272 - L2 LINE L2 -1 3312 3120 749 188 0 8 chr2 172839595 172839728 -77848126 + FLAM_C SINE Alu 1 132 -1 787 262 69 0 chr2 172839776 172839978 -77847876 + MIR SINE MIR 19 234 -28 2193 124 20 0 chr2 172841264 172841570 -77846284 - AluSx SINE Alu 0 312 1 1975 164 0 3 chr2 172842349 172842661 -77845193 + AluJb SINE Alu 1 311 -1 1849 164 3 0 chr2 172843439 172843725 -77844129 + AluJb SINE Alu 1 287 -25 1752 175 14 0 chr2 172843808 172844094 -77843760 + AluJb SINE Alu 1 290 -22 233 335 54 0 chr2 172844463 172844648 -77843206 + L1ME LINE L1 782 976 -5094 2083 136 10 3 chr2 172844679 172844988 -77842866 + AluSx SINE Alu 1 311 -1 186 43 0 0 chr2 172844995 172845018 -77842836 + (GGAA)n Simple_repeat Simple_repeat 2 24 0 365 236 37 94 chr2 172845018 172845315 -77842539 + L1ME LINE L1 988 1315 -4813 1169 252 160 18 chr2 172845315 172845830 -77842024 + L2 LINE L2 2708 3313 0 2084 47 4 0 chr2 172847349 172847637 -77840217 - AluY SINE Alu 0 328 40 358 313 107 37 chr2 172848084 172848265 -77839589 - L1M4 LINE L1 -3025 3121 2954 2224 101 3 29 chr2 172848265 172848440 -77839414 - AluSx SINE Alu -13 299 134 2295 100 0 0 chr2 172848440 172848741 -77839113 - AluSx SINE Alu -11 301 1 2224 101 3 29 chr2 172848741 172848872 -77838982 - AluSx SINE Alu -178 134 1 358 313 107 37 chr2 172848872 172849016 -77838838 - L1M4 LINE L1 -3192 2954 2773 369 162 105 89 chr2 172849031 172849222 -77838632 - L1MC5 LINE L1 -34 7927 7734 351 330 58 32 chr2 172849536 172849825 -77838029 + L1MC4 LINE L1 7622 7921 -121 2119 121 3 19 chr2 172849825 172850138 -77837716 + AluSx SINE Alu 5 312 0 351 330 58 32 chr2 172850138 172850160 -77837694 + L1MC4 LINE L1 7921 7941 -101 428 219 17 8 chr2 172850189 172850308 -77837546 + L1MC4 LINE L1 7918 8037 -5 2134 97 3 32 chr2 172850309 172850618 -77837236 + AluSc SINE Alu 1 300 -9 4121 270 70 35 chr2 172851092 172851870 -77835984 + L1MEc LINE L1 43 792 -5604 876 163 46 7 chr2 172851870 172852054 -77835800 + FAM SINE Alu 1 55 0 4121 270 70 35 chr2 172852054 172853198 -77834656 + L1MEc LINE L1 792 2034 -4362 374 294 12 0 chr2 172853552 172853637 -77834217 + L2 LINE L2 3167 3252 -20 21 0 0 0 chr2 172853796 172853817 -77834037 + AT_rich Low_complexity Low_complexity 1 21 0 1945 149 53 0 chr2 172853818 172854173 -77833681 - L1MA4 LINE L1 -1 6299 5926 189 178 0 0 chr2 172854300 172854345 -77833509 + (CAT)n Simple_repeat Simple_repeat 2 46 0 823 217 79 5 chr2 172854569 172854772 -77833082 - MIR SINE MIR -44 218 1 1855 136 32 0 chr2 172855509 172855788 -77832066 - AluSx SINE Alu -2 310 23 532 157 78 0 chr2 172855817 172855919 -77831935 - HY1 scRNA scRNA -2 110 1 251 67 44 0 chr2 172855923 172855968 -77831886 + T-rich Low_complexity Low_complexity 2 48 0 1470 187 13 62 chr2 172855983 172856288 -77831566 - AluJo SINE Alu -22 290 1 467 289 47 13 chr2 172856293 172856442 -77831412 + L2 LINE L2 3159 3312 -1 220 283 0 54 chr2 172856524 172856615 -77831239 + MER5B DNA MER1_type 4 101 -88 2305 98 0 0 chr2 172857437 172857732 -77830122 - AluSg1 SINE Alu -14 295 1 440 188 138 31 chr2 172858301 172858461 -77829393 - MER104 DNA MER2_type -3 177 1 21 82 0 0 chr2 172860522 172860571 -77827283 + AT_rich Low_complexity Low_complexity 1 49 0 228 97 0 0 chr2 172860919 172860950 -77826904 - U2 snRNA snRNA -153 35 5 1099 73 24 12 chr2 172862151 172862316 -77825538 + L1PA14 LINE L1 5995 6161 0 2308 87 0 0 chr2 172862408 172862696 -77825158 + AluSx SINE Alu 1 288 -24 231 241 0 17 chr2 172863255 172863313 -77824541 + LTR16A1 LTR ERVL 390 446 -11 26 0 0 0 chr2 172863624 172863650 -77824204 + AT_rich Low_complexity Low_complexity 1 26 0 1822 141 3 17 chr2 172863650 172863940 -77823914 - AluJo SINE Alu -26 286 1 2241 87 0 32 chr2 172864211 172864521 -77823333 + AluY SINE Alu 1 300 -11 678 312 29 5 chr2 172864525 172864730 -77823124 + MIR SINE MIR 28 237 -25 1791 177 14 0 chr2 172865064 172865352 -77822502 + AluJo SINE Alu 1 292 -20 307 321 107 27 chr2 172865371 172865483 -77822371 - L2 LINE L2 -14 3258 3138 1620 147 3 48 chr2 172865693 172866007 -77821847 + LTR8 LTR ERV1 1 300 -391 188 0 74 0 chr2 172866049 172866076 -77821778 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr2 172866472 172866494 -77821360 + AT_rich Low_complexity Low_complexity 1 22 0 799 224 77 11 chr2 172866499 172866682 -77821172 + MIR SINE MIR 1 195 -67 21 0 0 0 chr2 172867049 172867070 -77820784 + AT_rich Low_complexity Low_complexity 1 21 0 195 325 75 12 chr2 172867308 172867388 -77820466 - MIR3 SINE MIR -36 172 88 300 267 74 113 chr2 172867944 172868070 -77819784 - L1M2 LINE L1 -5694 1155 1026 273 109 0 0 chr2 172868070 172868116 -77819738 + (CGGGGG)n Simple_repeat Simple_repeat 4 49 0 300 267 74 113 chr2 172868116 172868300 -77819554 - L1M2 LINE L1 -5823 1026 857 33 25 0 0 chr2 172869068 172869108 -77818746 + AT_rich Low_complexity Low_complexity 1 40 0 1296 143 136 52 chr2 172869650 172869687 -77818167 + AluJb SINE Alu 1 33 -279 2447 45 0 3 chr2 172869687 172869978 -77817876 - AluY SINE Alu -20 291 2 1296 143 136 52 chr2 172869978 172870212 -77817642 + AluJb SINE Alu 33 295 -17 1328 158 74 49 chr2 172870806 172871090 -77816764 - AluJo SINE Alu -21 291 1 228 240 60 10 chr2 172871197 172871297 -77816557 - L1ME4a LINE L1 -50 6071 5967 243 0 0 0 chr2 172871305 172871332 -77816522 + (TA)n Simple_repeat Simple_repeat 1 27 0 336 202 193 9 chr2 172871375 172871484 -77816370 - L1ME4a LINE L1 -239 5882 5754 210 258 34 112 chr2 172871510 172871538 -77816316 - L2 LINE L2 0 3272 3243 2557 57 0 0 chr2 172871538 172871838 -77816016 + AluY SINE Alu 1 300 -11 210 258 34 112 chr2 172871838 172871898 -77815956 - L2 LINE L2 -29 3243 3191 22 35 0 0 chr2 172872528 172872557 -77815297 + AT_rich Low_complexity Low_complexity 1 29 0 362 57 19 0 chr2 172872575 172872628 -77815226 + (CA)n Simple_repeat Simple_repeat 2 55 0 358 162 29 0 chr2 172872661 172872729 -77815125 - MER116 DNA Mariner 0 80 11 27 49 0 0 chr2 172872730 172872771 -77815083 + AT_rich Low_complexity Low_complexity 1 41 0 27 0 0 0 chr2 172873031 172873058 -77814796 + AT_rich Low_complexity Low_complexity 1 27 0 2085 139 0 13 chr2 172873067 172873376 -77814478 + AluSx SINE Alu 1 305 -7 387 240 47 23 chr2 172874161 172874290 -77813564 + MER103 DNA DNA 35 166 0 2359 44 20 20 chr2 172874853 172875151 -77812703 - AluY SINE Alu -13 298 1 2087 184 74 11 chr2 172875172 172875629 -77812225 + MER66B LTR ERV1 1 486 0 1700 163 3 18 chr2 172875629 172875912 -77811942 - AluJb SINE Alu -33 279 1 453 302 207 18 chr2 172875915 172876243 -77811611 + L2 LINE L2 1985 2374 -940 1001 305 66 71 chr2 172876250 172876533 -77811321 + L2 LINE L2 1885 2168 -1146 1078 277 71 45 chr2 172876533 172876587 -77811267 - MLT1H LTR MaLR 0 549 498 2185 104 0 3 chr2 172876587 172876875 -77810979 + AluSx SINE Alu 24 310 -2 1078 277 71 45 chr2 172876875 172877355 -77810499 - MLT1H LTR MaLR -51 498 1 1001 305 66 71 chr2 172877355 172877867 -77809987 + L2 LINE L2 2168 2704 -610 235 223 86 65 chr2 172877924 172878063 -77809791 + HAL1 LINE L1 47 188 -2319 1421 220 26 62 chr2 172878370 172878494 -77809360 - L1ME1 LINE L1 -164 6071 5944 2564 65 0 0 chr2 172878494 172878800 -77809054 - AluY SINE Alu -5 306 1 1421 220 26 62 chr2 172878800 172879007 -77808847 - L1ME1 LINE L1 -291 5944 5751 1468 165 119 35 chr2 172879007 172879320 -77808534 + AluJo SINE Alu 1 335 0 1421 220 26 62 chr2 172879320 172879372 -77808482 - L1ME1 LINE L1 -484 5751 5699 440 255 179 0 chr2 172879434 172879579 -77808275 - L1ME1 LINE L1 -518 5717 5547 737 75 0 0 chr2 172879579 172879697 -77808157 - AluSp/q SINE Alu 0 307 190 712 228 68 58 chr2 172879702 172879903 -77807951 - L1ME1 LINE L1 -684 5551 5353 2010 152 20 26 chr2 172879903 172880146 -77807708 - MER7A DNA MER2_type -2692 346 106 1894 137 65 0 chr2 172880146 172880423 -77807431 + AluSx SINE Alu 1 295 -17 2010 152 20 26 chr2 172880423 172880528 -77807326 - MER7A DNA MER2_type -2932 106 2 712 228 68 58 chr2 172880528 172880709 -77807145 - L1ME1 LINE L1 -882 5353 5170 2260 100 19 13 chr2 172880709 172881018 -77806836 - AluSq SINE Alu -2 311 1 712 228 68 58 chr2 172881018 172881178 -77806676 - L1ME1 LINE L1 -1065 5170 5013 2084 106 0 7 chr2 172881180 172881489 -77806365 - AluSg SINE Alu 0 307 1 1767 92 0 25 chr2 172881537 172881777 -77806077 - AluSq SINE Alu -12 301 68 2408 74 0 7 chr2 172881778 172882076 -77805778 + AluY SINE Alu 2 297 -14 527 133 0 0 chr2 172882076 172882151 -77805703 - AluSq SINE Alu -236 76 2 3798 250 50 123 chr2 172882151 172882385 -77805469 - L1ME1 LINE L1 -1227 4988 4739 1743 174 10 3 chr2 172882385 172882673 -77805181 + AluJo SINE Alu 1 290 -22 3798 250 50 123 chr2 172882673 172882924 -77804930 - L1ME1 LINE L1 -1476 4739 4471 1717 135 48 45 chr2 172882924 172882937 -77804917 - AluJb SINE Alu 0 312 301 2409 94 0 3 chr2 172882937 172883246 -77804608 - AluSg SINE Alu 0 310 3 1717 135 48 45 chr2 172883246 172883409 -77804445 - AluJb SINE Alu -11 301 132 2376 79 3 23 chr2 172883409 172883713 -77804141 - AluSp SINE Alu -15 298 1 1717 135 48 45 chr2 172883713 172883846 -77804008 - AluJb SINE Alu -180 132 1 3798 250 50 123 chr2 172883846 172883992 -77803862 - L1ME1 LINE L1 -1744 4471 4316 2443 78 0 0 chr2 172883992 172884287 -77803567 - AluSg1 SINE Alu -14 295 1 3798 250 50 123 chr2 172884287 172884317 -77803537 - L1ME1 LINE L1 -1899 4316 4285 722 177 0 0 chr2 172884317 172884430 -77803424 - FLAM_C SINE Alu -29 114 2 3798 250 50 123 chr2 172884430 172885578 -77802276 - L1ME1 LINE L1 -1930 4285 3204 966 194 0 0 chr2 172885578 172885753 -77802101 - FRAM SINE Alu 0 168 1 676 257 29 25 chr2 172885754 172885995 -77801859 - L1ME1 LINE L1 -3009 3206 2965 195 42 0 0 chr2 172887211 172887235 -77800619 + (TTC)n Simple_repeat Simple_repeat 2 25 0 4415 227 41 43 chr2 172887371 172889063 -77798791 - L1ME1 LINE L1 -3225 2990 1346 1879 127 46 30 chr2 172889063 172889432 -77798422 + THE1C LTR MaLR 1 375 0 4415 227 41 43 chr2 172889432 172889916 -77797938 - L1ME1 LINE L1 -4869 1346 863 471 178 0 22 chr2 172889935 172890025 -77797829 - FRAM SINE Alu -12 164 77 1103 168 31 16 chr2 172890025 172890281 -77797573 + MER33 DNA MER1_type 56 315 -9 738 244 37 78 chr2 172890285 172890527 -77797327 + L2 LINE L2 802 1031 -2283 1713 158 3 46 chr2 172890527 172890830 -77797024 - AluJo SINE Alu -22 290 1 738 244 37 78 chr2 172890830 172890882 -77796972 + L2 LINE L2 1031 1084 -2230 522 310 60 5 chr2 172891082 172891282 -77796572 + L2 LINE L2 1097 1307 -2007 1888 221 121 74 chr2 172891328 172891815 -77796039 + Charlie2a DNA MER1_type 79 542 -2320 738 172 0 0 chr2 172891815 172891931 -77795923 - FLAM_C SINE Alu -17 116 1 1888 221 121 74 chr2 172891931 172892298 -77795556 + Charlie2a DNA MER1_type 542 1041 -1821 2109 121 0 3 chr2 172892298 172892588 -77795266 + AluSx SINE Alu 1 289 -23 1888 221 121 74 chr2 172892588 172892763 -77795091 + Charlie2a DNA MER1_type 1041 1206 -1656 2032 93 104 0 chr2 172893131 172893411 -77794443 - AluSp SINE Alu -4 309 1 1684 213 66 20 chr2 172893863 172894035 -77793819 + MLT1C LTR MaLR 6 169 -298 252 59 0 0 chr2 172894035 172894069 -77793785 + (CAGA)n Simple_repeat Simple_repeat 1 34 0 1684 213 66 20 chr2 172894069 172894338 -77793516 + MLT1C LTR MaLR 169 467 0 1713 222 34 12 chr2 172894891 172895301 -77792553 + LTR52 LTR ERVL 1 419 -2 1886 132 66 0 chr2 172895318 172895591 -77792263 + AluJb SINE Alu 5 295 -17 265 245 0 0 chr2 172895917 172895970 -77791884 + MER81 DNA DNA 35 87 -27 * 592 222 26 46 chr2 172895960 172896113 -77791741 + MLT1F LTR MaLR 393 542 0 2267 93 0 0 chr2 172896120 172896420 -77791434 + AluSg SINE Alu 1 300 0 2142 250 37 9 chr2 172896452 172897370 -77790484 + L2 LINE L2 2360 3306 -7 423 266 23 57 chr2 172897406 172897583 -77790271 + HAL1b LINE L1 712 882 -466 206 325 0 38 chr2 172898562 172898642 -77789212 + L2 LINE L2 2696 2772 -542 1671 167 27 37 chr2 172898759 172899059 -77788795 + AluJb SINE Alu 1 297 -15 646 238 40 22 chr2 172899380 172899603 -77788251 + MER113 DNA MER1_type? 1 227 -294 250 374 53 8 chr2 172899837 172899968 -77787886 + L2 LINE L2 3136 3272 0 1364 164 0 126 chr2 172900068 172900410 -77787444 - AluJo SINE Alu -2 300 2 1770 205 149 106 chr2 172900499 172900597 -77787257 + MLT1G LTR MaLR 1 93 -497 2246 114 10 7 chr2 172900597 172900905 -77786949 + AluSx SINE Alu 1 309 -3 1770 205 149 106 chr2 172900905 172901399 -77786455 + MLT1G LTR MaLR 93 590 0 245 191 0 0 chr2 172901399 172901446 -77786408 + MLT1G-int LTR MaLR 1 47 -1324 2860 158 46 20 chr2 172901492 172902037 -77785817 - MER89 LTR ERV1 0 559 1 248 353 55 20 chr2 172902118 172902319 -77785535 + MLT1G-int LTR MaLR 312 519 -852 286 257 110 9 chr2 172902463 172902572 -77785282 - MLT1-int LTR MaLR -25 1346 1227 5750 114 7 54 chr2 172902849 172903172 -77784682 - MER4D LTR ERV1 0 903 567 2401 104 0 0 chr2 172903172 172903480 -77784374 + AluSx SINE Alu 1 308 -4 5750 114 7 54 chr2 172903480 172903888 -77783966 - MER4D LTR ERV1 -336 567 223 2258 114 0 0 chr2 172903888 172904185 -77783669 - AluSx SINE Alu -10 302 6 5750 114 7 54 chr2 172904185 172904399 -77783455 - MER4D LTR ERV1 -680 223 1 1551 230 150 64 chr2 172904412 172904901 -77782953 + MLT1G LTR MaLR 58 590 0 378 244 159 7 chr2 172904922 172905058 -77782796 - MIR3 SINE MIR -3 205 56 183 200 29 0 chr2 172905625 172905660 -77782194 - MIR SINE MIR -90 118 83 1649 171 25 7 chr2 172906225 172906380 -77781474 - AluJb SINE Alu -26 286 122 180 0 0 0 chr2 172906380 172906400 -77781454 + (TTTG)n Simple_repeat Simple_repeat 4 23 0 1649 171 25 7 chr2 172906400 172906525 -77781329 - AluJb SINE Alu -190 122 1 1999 175 11 14 chr2 172906722 172907088 -77780766 - MLT1A1 LTR MaLR 0 365 1 21 0 0 0 chr2 172907281 172907302 -77780552 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 172907358 172907388 -77780466 + AT_rich Low_complexity Low_complexity 1 30 0 2193 108 3 61 chr2 172907403 172907763 -77780091 - L1PB1 LINE L1 -1 6150 5812 349 182 0 0 chr2 172907781 172907847 -77780007 - MIR SINE MIR -73 189 124 279 0 0 0 chr2 172907848 172907879 -77779975 + (CA)n Simple_repeat Simple_repeat 1 31 0 2229 107 0 3 chr2 172908063 172908361 -77779493 - AluSx SINE Alu -15 297 1 2303 106 10 0 chr2 172908369 172908670 -77779184 - AluSq SINE Alu -7 306 3 289 283 43 0 chr2 172908742 172908834 -77779020 + MLT1J2 LTR MaLR 67 162 -288 290 196 0 0 chr2 172908844 172908890 -77778964 - MLT1F LTR MaLR -496 46 1 385 259 20 61 chr2 172909003 172909150 -77778704 + L2 LINE L2 3172 3312 -1 1399 262 57 29 chr2 172909425 172909914 -77777940 - MLT1J LTR MaLR -2 509 7 2217 207 123 35 chr2 172910016 172910561 -77777293 + MLT1E LTR MaLR 1 593 0 290 253 40 0 chr2 172911156 172911231 -77776623 - L2 LINE L2 -4 3309 3232 246 338 118 0 chr2 172911258 172911394 -77776460 + L2 LINE L2 3121 3272 0 203 184 26 0 chr2 172911462 172911500 -77776354 + L2 LINE L2 3186 3224 -89 * 208 357 31 0 chr2 172911494 172911592 -77776262 + MIR3 SINE MIR 108 208 0 364 341 28 17 chr2 172911985 172912164 -77775690 + MER5A DNA MER1_type 7 187 -2 2239 90 19 32 chr2 172912382 172912692 -77775162 - AluSx SINE Alu -6 306 1 2353 109 3 0 chr2 172913728 172914039 -77773815 - AluSx SINE Alu 0 312 1 1036 121 11 23 chr2 172914150 172914324 -77773530 - MER5A DNA MER1_type 0 189 18 1199 110 0 29 chr2 172914742 172914915 -77772939 - AluSg/x SINE Alu -10 300 133 2224 97 23 0 chr2 172915945 172916245 -77771609 + AluSx SINE Alu 1 307 -5 2540 78 0 0 chr2 172918228 172918537 -77769317 + AluSc SINE Alu 1 309 0 25 31 0 0 chr2 172921212 172921244 -77766610 + AT_rich Low_complexity Low_complexity 1 32 0 203 162 27 0 chr2 172922166 172922203 -77765651 + (CGG)n Simple_repeat Simple_repeat 2 39 0 189 121 0 0 chr2 172922349 172922382 -77765472 + (CGG)n Simple_repeat Simple_repeat 2 34 0 216 211 11 63 chr2 172922878 172922973 -77764881 + C-rich Low_complexity Low_complexity 5 94 0 231 36 0 0 chr2 172924100 172924128 -77763726 + (CA)n Simple_repeat Simple_repeat 2 29 0 23 68 0 0 chr2 172924350 172924394 -77763460 + GC_rich Low_complexity Low_complexity 1 44 0 25 31 0 0 chr2 172924412 172924444 -77763410 + GC_rich Low_complexity Low_complexity 1 32 0 591 283 57 30 chr2 172926179 172926409 -77761445 + MIR SINE MIR 7 242 -20 4237 162 75 20 chr2 172928842 172928993 -77758861 + L1MB7 LINE L1 4899 5040 -1144 2215 88 32 3 chr2 172928993 172929276 -77758578 + AluSg SINE Alu 1 291 -19 4237 162 75 20 chr2 172929276 172930336 -77757518 + L1MB7 LINE L1 5040 6184 0 2164 123 0 7 chr2 172931392 172931685 -77756169 + AluSx SINE Alu 1 291 -21 1731 176 0 14 chr2 172932393 172932682 -77755172 - AluJb SINE Alu -27 285 1 182 316 127 0 chr2 172933244 172933323 -77754531 - MIR SINE MIR -159 103 15 229 206 29 108 chr2 172934158 172934220 -77753634 - LTR67 LTR ERVL -29 528 475 2407 108 7 0 chr2 172934220 172934526 -77753328 + AluSx SINE Alu 1 308 -4 229 206 29 108 chr2 172934526 172934565 -77753289 - LTR67 LTR ERVL -82 475 435 1002 192 73 27 chr2 172934734 172934931 -77752923 - LTR39 LTR ERV1 0 783 574 1957 149 134 33 chr2 172934931 172935275 -77752579 + MSTA LTR MaLR 1 390 -38 2077 114 0 0 chr2 172935275 172935547 -77752307 - AluSg SINE Alu -38 272 1 1957 149 134 33 chr2 172935547 172935591 -77752263 + MSTA LTR MaLR 390 428 0 560 128 23 0 chr2 172935601 172935687 -77752167 - MSTA LTR MaLR -2 426 339 186 278 41 65 chr2 172935738 172935907 -77751947 - L2 LINE L2 -923 2391 2227 193 162 0 0 chr2 172935932 172935969 -77751885 + L2 LINE L2 3271 3307 -6 242 305 25 51 chr2 172936163 172936182 -77751672 + LTR67 LTR ERVL 87 105 -452 248 143 0 0 chr2 172936182 172936217 -77751637 + MLT1J LTR MaLR 100 134 -377 242 305 25 51 chr2 172936217 172936281 -77751573 + LTR67 LTR ERVL 105 201 -356 3314 114 19 31 chr2 172936443 172936628 -77751226 + LTR39 LTR ERV1 37 223 -560 2077 112 0 20 chr2 172936628 172936923 -77750931 - AluSg SINE Alu -20 290 2 3314 114 19 31 chr2 172936923 172937254 -77750600 + LTR39 LTR ERV1 223 547 -236 1038 213 98 0 chr2 172937250 172937475 -77750379 + MLT1G LTR MaLR 344 590 0 * 605 192 50 0 chr2 172937854 172937974 -77749880 - MER3 DNA MER1_type -4 205 80 21 71 0 0 chr2 172938985 172939027 -77748827 + AT_rich Low_complexity Low_complexity 1 42 0 2182 104 3 10 chr2 172939033 172939322 -77748532 - AluSx SINE Alu -25 287 1 765 159 76 0 chr2 172939532 172939677 -77748177 - AluSg/x SINE Alu -20 292 137 2357 78 0 0 chr2 172939758 172940069 -77747785 + AluSq SINE Alu 1 311 0 2358 83 0 0 chr2 172940723 172941012 -77746842 - AluSc SINE Alu -11 298 10 1828 142 21 78 chr2 172941039 172941398 -77746456 - L1MB2 LINE L1 -2 6169 5832 2244 104 0 14 chr2 172941398 172941695 -77746159 - AluSq SINE Alu -20 293 1 1828 142 21 78 chr2 172941695 172941722 -77746132 - L1MB2 LINE L1 -339 5832 5805 1544 209 7 3 chr2 172942278 172942575 -77745279 + AluJo SINE Alu 1 298 -14 2486 83 3 3 chr2 172944157 172944469 -77743385 - AluSp SINE Alu 0 313 2 482 186 80 26 chr2 172944799 172944912 -77742942 + MER5B DNA MER1_type 1 119 -59 1590 213 98 109 chr2 172944916 172945059 -77742795 - L1MD2 LINE L1 -2 6357 6214 2266 126 0 0 chr2 172945059 172945369 -77742485 + AluSx SINE Alu 2 311 -1 1590 213 98 109 chr2 172945369 172945911 -77741943 - L1MD2 LINE L1 -145 6214 5680 2263 102 7 0 chr2 172945911 172946342 -77741512 - AluY SINE Alu 0 436 4 240 208 19 0 chr2 172946349 172946402 -77741452 + MER5B DNA MER1_type 125 178 0 2323 86 3 10 chr2 172946575 172946876 -77740978 - AluSx SINE Alu -12 300 2 184 261 148 11 chr2 172946878 172946966 -77740888 + MIR SINE MIR 163 262 0 406 243 69 28 chr2 172947218 172947362 -77740492 + L2 LINE L2 3122 3271 -1 756 212 52 21 chr2 172947753 172947946 -77739908 + MIR SINE MIR 24 222 -40 2330 121 0 0 chr2 172948734 172949047 -77738807 - AluSq SINE Alu 0 313 1 2406 91 3 0 chr2 172949776 172950084 -77737770 - AluSp SINE Alu -3 310 2 2240 98 3 13 chr2 172950322 172950628 -77737226 - AluSc SINE Alu -6 303 1 2367 75 3 28 chr2 172950809 172951128 -77736726 + AluY SINE Alu 1 311 0 549 290 140 21 chr2 172951137 172951210 -77736644 - L1MB2 LINE L1 -317 5804 5741 216 67 0 0 chr2 172951210 172951240 -77736614 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 549 290 140 21 chr2 172951240 172951538 -77736316 - L1MB2 LINE L1 -380 5741 5389 2417 82 7 0 chr2 172951539 172951842 -77736012 - AluSg SINE Alu -5 305 1 876 151 0 36 chr2 172951843 172952009 -77735845 - AluSq SINE Alu -17 296 137 302 273 74 16 chr2 172952010 172952131 -77735723 - L1MB2 LINE L1 -765 5397 5270 932 151 41 0 chr2 172952299 172952471 -77735383 - L1MB3 LINE L1 -9 6174 5996 554 141 13 34 chr2 172952647 172952796 -77735058 + C-rich Low_complexity Low_complexity 4 149 0 685 187 41 0 chr2 172952800 172952923 -77734931 - FLAM_A SINE Alu -1 141 14 1745 205 106 17 chr2 172953004 172953477 -77734377 + LTR40a LTR ERVL 5 519 0 211 298 0 0 chr2 172953701 172953758 -77734096 + CT-rich Low_complexity Low_complexity 2 58 0 208 216 0 0 chr2 172953790 172953827 -77734027 + MIR SINE MIR 215 251 -11 * 219 219 0 0 chr2 172953794 172953835 -77734019 + L2 LINE L2 3223 3263 -9 225 0 0 0 chr2 172954272 172954297 -77733557 + (A)n Simple_repeat Simple_repeat 1 25 0 2275 101 3 19 chr2 172954427 172954745 -77733109 - AluSp SINE Alu 0 313 1 2177 132 3 0 chr2 172955188 172955498 -77732356 - AluSx SINE Alu -1 311 1 2625 65 0 0 chr2 172955510 172955818 -77732036 - AluY SINE Alu -3 308 1 1205 150 0 0 chr2 172955979 172956159 -77731695 - AluSg/x SINE Alu 0 312 133 470 263 9 0 chr2 172956597 172956711 -77731143 + L2 LINE L2 3197 3311 -2 2560 59 3 3 chr2 172956744 172957048 -77730806 + AluSp SINE Alu 1 304 -9 21 0 0 0 chr2 172959146 172959167 -77728687 + AT_rich Low_complexity Low_complexity 1 21 0 2032 129 3 3 chr2 172960569 172960864 -77726990 + AluJb SINE Alu 6 300 -12 2287 96 0 0 chr2 172961966 172962258 -77725596 - AluY SINE Alu -19 292 1 2256 100 3 3 chr2 172962265 172962565 -77725289 - AluSg SINE Alu -10 300 1 2398 94 3 0 chr2 172962577 172962886 -77724968 - AluSg SINE Alu 0 310 1 28 29 0 0 chr2 172963057 172963092 -77724762 + AT_rich Low_complexity Low_complexity 1 35 0 240 87 22 0 chr2 172963092 172963138 -77724716 - L1MA9 LINE L1 -30 6282 6236 1855 114 0 15 chr2 172963227 172963490 -77724364 - AluSc SINE Alu -17 292 34 316 263 8 45 chr2 172963598 172963731 -77724123 + L2 LINE L2 2979 3106 -207 249 204 37 0 chr2 172963748 172963802 -77724052 + MER94 DNA DNA 1 56 -78 375 227 13 93 chr2 172963876 172964026 -77723828 + L2 LINE L2 3145 3282 -31 204 97 0 0 chr2 172964038 172964069 -77723785 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 1979 146 0 13 chr2 172964451 172964753 -77723101 - AluJo SINE Alu -9 303 6 432 0 0 0 chr2 172964970 172965018 -77722836 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 739 212 66 0 chr2 172965096 172965278 -77722576 - AluJo SINE Alu 0 312 121 238 83 0 42 chr2 172966060 172966108 -77721746 + (TA)n Simple_repeat Simple_repeat 2 47 0 183 80 0 0 chr2 172966219 172966244 -77721610 + (CTG)n Simple_repeat Simple_repeat 2 26 0 202 301 108 34 chr2 172966497 172966673 -77721181 - MER5A DNA MER1_type 0 189 1 239 300 0 0 chr2 172967218 172967278 -77720576 + L2 LINE L2 3213 3272 0 2394 66 0 23 chr2 172967291 172967593 -77720261 - AluY SINE Alu -16 295 1 1186 139 6 0 chr2 172968778 172968951 -77718903 - MER58B DNA MER1_type -1 340 167 677 121 0 48 chr2 172968984 172969108 -77718746 + FLAM_A SINE Alu 23 140 -2 2181 97 4 0 chr2 172969120 172969399 -77718455 + AluSp SINE Alu 2 281 -32 240 59 0 0 chr2 172969403 172969437 -77718417 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2401 93 3 0 chr2 172969568 172969870 -77717984 + AluSp SINE Alu 1 303 -10 518 256 145 30 chr2 172970671 172970905 -77716949 + MIR SINE MIR 2 262 0 2507 90 3 0 chr2 172970941 172971252 -77716602 - AluSx SINE Alu 0 312 1 23 0 0 0 chr2 172971546 172971569 -77716285 + AT_rich Low_complexity Low_complexity 1 23 0 2247 76 14 0 chr2 172971694 172971994 -77715860 - AluSq SINE Alu 0 308 5 284 305 71 54 chr2 172973661 172973900 -77713954 + L2 LINE L2 2590 2832 -482 2339 94 3 0 chr2 172973945 172974252 -77713602 + AluSx SINE Alu 5 312 0 189 358 142 31 chr2 172974444 172974606 -77713248 + L2 LINE L2 2986 3165 -107 2124 113 3 3 chr2 172974646 172974951 -77712903 + AluJb SINE Alu 1 305 0 240 183 50 0 chr2 172975043 172975103 -77712751 + L1MB7 LINE L1 6122 6184 0 1739 177 14 0 chr2 172975139 172975422 -77712432 - AluJo SINE Alu -23 289 3 2332 64 0 0 chr2 172975473 172975799 -77712055 + AluY SINE Alu 1 326 0 800 193 14 0 chr2 172975886 172976026 -77711828 + AluJo SINE Alu 23 164 -148 2375 90 0 0 chr2 172976303 172976602 -77711252 - AluSg SINE Alu -11 299 1 918 270 37 27 chr2 172976992 172977410 -77710444 + L1ME3A LINE L1 1391 2009 -4598 222 222 0 0 chr2 172977481 172977535 -77710319 + (TA)n Simple_repeat Simple_repeat 2 55 0 1326 151 60 48 chr2 172977772 172977901 -77709953 + AluJo SINE Alu 1 127 -185 561 30 0 0 chr2 172977901 172977968 -77709886 + (CA)n Simple_repeat Simple_repeat 2 68 0 1326 151 60 48 chr2 172977968 172978090 -77709764 + AluJo SINE Alu 127 255 -57 274 226 48 24 chr2 172978094 172978178 -77709676 + L1ME3A LINE L1 3025 3110 -3316 732 267 168 43 chr2 172978247 172978621 -77709233 + MLT1H LTR MaLR 129 549 0 873 240 77 56 chr2 172978622 172978928 -77708926 + L1ME3A LINE L1 4421 4742 -1684 2118 135 0 3 chr2 172978928 172979225 -77708629 + AluSx SINE Alu 1 296 -16 873 240 77 56 chr2 172979225 172979384 -77708470 + L1ME3A LINE L1 4742 4896 -1530 1112 165 25 55 chr2 172979400 172979564 -77708290 - AluJo SINE Alu -26 286 130 2321 92 7 0 chr2 172979564 172979858 -77707996 + AluSg SINE Alu 1 296 -14 1112 165 25 55 chr2 172979858 172979929 -77707925 - AluJo SINE Alu -182 130 58 910 121 0 0 chr2 172979962 172980086 -77707768 - FLAM_C SINE Alu -19 124 1 1029 281 126 31 chr2 172980088 172980531 -77707323 + L1ME3A LINE L1 4886 5285 -1141 1896 143 27 3 chr2 172980531 172980825 -77707029 - AluJb SINE Alu -1 311 11 1029 281 126 31 chr2 172980825 172980844 -77707010 + L1ME3A LINE L1 5285 5301 -1125 613 131 108 8 chr2 172980844 172980974 -77706880 + L1PA12 LINE L1 6026 6168 0 1029 281 126 31 chr2 172980974 172981097 -77706757 + L1ME3A LINE L1 5301 5528 -898 1563 258 30 60 chr2 172981124 172981577 -77706277 + L1ME3A LINE L1 5597 6025 -425 2405 87 0 10 chr2 172981577 172981887 -77705967 + AluSx SINE Alu 1 307 -5 1563 258 30 60 chr2 172981887 172982099 -77705755 + L1ME3A LINE L1 6025 6242 -208 472 235 49 64 chr2 172982155 172982359 -77705495 + L1ME3A LINE L1 6245 6445 -5 2083 150 0 6 chr2 172982361 172982675 -77705179 + AluSx SINE Alu 1 312 0 2205 115 3 6 chr2 172982831 172983144 -77704710 - AluSx SINE Alu 0 312 1 477 272 123 25 chr2 172983144 172983379 -77704475 + HAL1 LINE L1 2250 2507 0 2284 93 3 3 chr2 172983437 172983738 -77704116 + AluSp SINE Alu 1 301 -12 27 73 0 0 chr2 172984106 172984161 -77703693 + AT_rich Low_complexity Low_complexity 1 55 0 2321 88 0 38 chr2 172984398 172984716 -77703138 - AluSg SINE Alu -4 306 1 203 211 0 158 chr2 172985069 172985183 -77702671 - L2 LINE L2 -40 3232 3137 2208 78 0 0 chr2 172988129 172988399 -77699455 + AluSg SINE Alu 40 309 -1 1871 79 0 0 chr2 172988823 172989051 -77698803 + AluSg/x SINE Alu 83 310 0 238 311 115 33 chr2 172989064 172989186 -77698668 - MIR3 SINE MIR -47 161 30 2194 109 14 0 chr2 172989234 172989527 -77698327 - AluSx SINE Alu -15 297 1 263 90 111 0 chr2 172989604 172989748 -77698106 + (TA)n Simple_repeat Simple_repeat 2 161 0 * 461 117 78 0 chr2 172989738 172989995 -77697859 + (TTATA)n Simple_repeat Simple_repeat 1 277 0 313 117 56 37 chr2 172990008 172990170 -77697684 + (TTATA)n Simple_repeat Simple_repeat 5 169 0 214 100 113 0 chr2 172990178 172990258 -77697596 + (TA)n Simple_repeat Simple_repeat 2 90 0 305 120 46 46 chr2 172990260 172990435 -77697419 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 1912 142 29 4 chr2 172990443 172990724 -77697130 - AluSx SINE Alu -24 288 1 1836 167 0 13 chr2 172992376 172992687 -77695167 + AluJb SINE Alu 1 307 -5 2430 67 3 0 chr2 172992785 172993082 -77694772 - AluSp SINE Alu -15 298 1 2280 102 10 3 chr2 172993580 172993883 -77693971 - AluSx SINE Alu -7 305 1 2104 136 0 3 chr2 172994485 172994787 -77693067 + AluSx SINE Alu 1 301 -11 663 174 118 0 chr2 172994798 172994942 -77692912 - MER53 DNA DNA -28 161 1 315 230 23 92 chr2 172995999 172996086 -77691768 - MER5B DNA MER1_type -97 81 1 305 47 23 0 chr2 172996847 172996890 -77690964 + (TGAA)n Simple_repeat Simple_repeat 2 45 0 861 297 42 21 chr2 172997440 172997868 -77689986 - L1ME LINE L1 -298 5823 5387 1566 230 65 51 chr2 172998071 172998580 -77689274 + MER113 DNA MER1_type? 2 517 -4 215 234 106 32 chr2 172998657 172998751 -77689103 + MIR SINE MIR 141 241 -21 699 220 0 89 chr2 172998784 172998975 -77688879 - MER5B DNA MER1_type -1 177 4 324 222 39 92 chr2 173000117 173000270 -77687584 + MIR3 SINE MIR 12 156 -52 260 245 0 0 chr2 173000459 173000512 -77687342 + L3 LINE CR1 1523 1575 -2 21 0 0 0 chr2 173000855 173000876 -77686978 + AT_rich Low_complexity Low_complexity 1 21 0 249 33 0 0 chr2 173000961 173000991 -77686863 + (GA)n Simple_repeat Simple_repeat 1 30 0 2274 98 0 3 chr2 173001603 173001900 -77685954 + AluSx SINE Alu 5 300 -12 312 27 0 0 chr2 173002082 173002119 -77685735 + (CA)n Simple_repeat Simple_repeat 2 38 0 25293 54 14 2 chr2 173003454 173007313 -77680541 - L1PA5 LINE L1 -9 6145 2248 12195 107 24 17 chr2 173007314 173009132 -77678722 - L1PA5 LINE L1 -4306 1840 11 2019 144 3 3 chr2 173009205 173009504 -77678350 - AluSx SINE Alu -13 299 1 42187 59 8 1 chr2 173010400 173016498 -77671356 + L1PA5 LINE L1 11 6153 -1 2035 127 3 40 chr2 173017249 173017572 -77670282 + AluSx SINE Alu 1 311 -1 600 228 114 72 chr2 173017714 173017803 -77670051 - MIR SINE MIR -13 249 165 2119 223 58 32 chr2 173017803 173017883 -77669971 + LTR40a LTR ERVL 5 81 -438 2300 94 0 0 chr2 173017883 173018182 -77669672 + AluSx SINE Alu 1 299 -13 2119 223 58 32 chr2 173018182 173018603 -77669251 + LTR40a LTR ERVL 81 519 0 600 228 114 72 chr2 173018603 173018750 -77669104 - MIR SINE MIR -97 165 3 412 233 56 0 chr2 173018887 173018977 -77668877 + L2 LINE L2 2702 2796 -518 1035 237 137 68 chr2 173018987 173019109 -77668745 + MLT1F LTR MaLR 1 113 -429 1857 83 0 0 chr2 173019109 173019337 -77668517 + AluSg/x SINE Alu 83 310 0 1035 237 137 68 chr2 173019337 173019621 -77668233 + MLT1F LTR MaLR 113 435 -107 7555 35 4 30 chr2 173019621 173020536 -77667318 + MER11D LTR ERVK 1 892 -5 8714 36 8 1 chr2 173020536 173021556 -77666298 + HERVK11D LTR ERVK 5565 6591 -1161 8334 31 4 2 chr2 173021546 173022514 -77665340 + HERVK11D LTR ERVK 6783 7752 0 * 8182 39 0 1 chr2 173022514 173023412 -77664442 + MER11D LTR ERVK 1 897 0 718 134 9 0 chr2 173023412 173023524 -77664330 + MLT1F LTR MaLR 455 567 0 561 255 372 9 chr2 173023530 173023863 -77663991 + L2 LINE L2 2851 3304 -9 518 241 35 17 chr2 173024367 173024483 -77663371 + MER5A DNA MER1_type 18 135 -54 491 295 164 5 chr2 173024721 173024928 -77662926 - MIR SINE MIR -1 261 22 3640 63 11 16 chr2 173025064 173025510 -77662344 - MLT2A1 LTR ERVL 0 444 1 483 220 54 75 chr2 173026495 173026681 -77661173 - L2 LINE L2 -20 3293 3112 2302 87 0 17 chr2 173028717 173029017 -77658837 - AluY SINE Alu -16 295 1 335 266 117 99 chr2 173029115 173029449 -77658405 + MLT1K LTR MaLR 111 450 -138 247 188 21 0 chr2 173029746 173029794 -77658060 + (TG)n Simple_repeat Simple_repeat 2 50 0 216 86 0 0 chr2 173030367 173030402 -77657452 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 580 171 29 0 chr2 173030855 173030960 -77656894 - AluSg/x SINE Alu -21 288 181 1080 269 74 28 chr2 173031425 173031815 -77656039 + MLT1I LTR MaLR 1 408 -1 2148 92 3 0 chr2 173032018 173032333 -77655521 - AluSp SINE Alu 0 316 1 2210 288 160 39 chr2 173032423 173033201 -77654653 - L2 LINE L2 -19 3294 2611 2206 98 3 10 chr2 173033201 173033496 -77654358 - AluSx SINE Alu -19 293 1 2210 288 160 39 chr2 173033496 173034161 -77653693 - L2 LINE L2 -702 2611 1683 28 48 0 0 chr2 173034561 173034603 -77653251 + AT_rich Low_complexity Low_complexity 1 42 0 201 74 0 0 chr2 173034788 173034815 -77653039 + (TAAAAA)n Simple_repeat Simple_repeat 3 29 0 377 225 95 6 chr2 173034827 173034894 -77652960 - L1MC4a LINE L1 -1895 5913 5853 1986 180 0 0 chr2 173034894 173035238 -77652616 - MER7A DNA MER2_type -1 345 4 377 225 95 6 chr2 173035238 173035339 -77652515 - L1MC4a LINE L1 -1955 5853 5730 2331 105 3 6 chr2 173035973 173036286 -77651568 - AluSp SINE Alu 0 313 2 185 370 172 0 chr2 173036298 173036490 -77651364 - L2 LINE L2 -527 2787 2563 291 191 0 36 chr2 173037379 173037463 -77650391 + GA-rich Low_complexity Low_complexity 2 82 0 22 0 0 0 chr2 173037529 173037551 -77650303 + AT_rich Low_complexity Low_complexity 1 22 0 323 301 127 19 chr2 173039165 173039306 -77648548 + L1M4 LINE L1 5003 5127 -1019 2157 97 0 4 chr2 173039306 173039585 -77648269 - AluSx SINE Alu -12 300 23 323 301 127 19 chr2 173039585 173039702 -77648152 + L1M4 LINE L1 5127 5289 -857 190 281 0 53 chr2 173040028 173040085 -77647769 + L2 LINE L2 3211 3264 -8 507 323 74 9 chr2 173040184 173040401 -77647453 - MIR SINE MIR -24 238 8 1583 92 26 13 chr2 173041677 173041905 -77645949 - AluSg/x SINE Alu -3 307 77 1936 151 10 7 chr2 173043334 173043633 -77644221 + AluJo SINE Alu 1 300 -12 375 273 103 48 chr2 173043859 173044067 -77643787 - MIR SINE MIR -52 210 1 279 0 0 0 chr2 173044213 173044244 -77643610 + (TG)n Simple_repeat Simple_repeat 1 31 0 201 105 0 53 chr2 173044697 173044735 -77643119 + (TCTCC)n Simple_repeat Simple_repeat 1 36 0 280 250 65 54 chr2 173044878 173044970 -77642884 - MLT1K LTR MaLR -349 239 147 266 319 0 0 chr2 173045598 173045667 -77642187 + MIR SINE MIR 79 147 -115 1769 157 7 18 chr2 173045669 173045955 -77641899 + AluJo SINE Alu 1 283 -29 292 170 0 0 chr2 173046037 173046090 -77641764 + (TCTA)n Simple_repeat Simple_repeat 1 53 0 277 190 8 8 chr2 173046103 173046224 -77641630 + (TA)n Simple_repeat Simple_repeat 1 121 0 391 248 60 43 chr2 173046312 173046429 -77641425 - L2 LINE L2 -15 3298 3180 245 191 0 21 chr2 173046453 173046500 -77641354 + MIR SINE MIR 206 251 -11 497 274 139 19 chr2 173046907 173047115 -77640739 + MIR SINE MIR 15 247 -15 479 257 46 0 chr2 173047331 173047440 -77640414 + MIR3 SINE MIR 86 199 -9 16683 114 50 18 chr2 173048907 173050626 -77637228 - Tigger3(Golem) DNA MER2_type 0 3029 1187 1689 164 3 27 chr2 173050626 173050919 -77636935 - AluJo SINE Alu -23 289 4 16683 114 50 18 chr2 173050919 173051973 -77635881 - Tigger3(Golem) DNA MER2_type -1842 1187 168 194 0 39 0 chr2 173053024 173053050 -77634804 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1486 100 168 24 chr2 173053052 173053302 -77634552 - AluSx SINE Alu -26 286 1 1164 138 0 17 chr2 173053896 173054077 -77633777 + MER5B DNA MER1_type 1 178 0 452 268 17 87 chr2 173055233 173055464 -77632390 + MIR SINE MIR 48 262 0 195 299 93 65 chr2 173055805 173055912 -77631942 - L2 LINE L2 -24 3248 3139 586 289 95 26 chr2 173057344 173058160 -77629694 + L1ME LINE L1 4879 5764 -398 375 23 0 0 chr2 173058309 173058353 -77629501 + (CA)n Simple_repeat Simple_repeat 1 44 0 974 167 70 109 chr2 173058359 173058409 -77629445 - MER69 DNA AcHobo -13 2513 2463 2298 111 3 0 chr2 173058409 173058716 -77629138 - AluSx SINE Alu -4 308 1 974 167 70 109 chr2 173058716 173059095 -77628759 - MER69 DNA AcHobo -63 2463 2101 43 64 0 0 chr2 173059729 173059807 -77628047 + AT_rich Low_complexity Low_complexity 1 78 0 279 338 73 33 chr2 173061658 173061809 -77626045 - L2 LINE L2 -7 3265 3109 26 30 0 0 chr2 173061827 173061860 -77625994 + AT_rich Low_complexity Low_complexity 1 33 0 1439 293 67 13 chr2 173061874 173062399 -77625455 + ERVL LTR ERVL 4851 5403 -361 1029 208 183 3 chr2 173062488 173062952 -77624902 + LTR50 LTR ERVL 55 684 -111 466 305 40 28 chr2 173062996 173063173 -77624681 + MIR3 SINE MIR 19 197 -11 1272 223 20 7 chr2 173063438 173063739 -77624115 + MER58B DNA MER1_type 37 341 0 335 321 104 17 chr2 173063787 173064027 -77623827 - L1ME4a LINE L1 -202 5919 5659 240 155 17 35 chr2 173064116 173064174 -77623680 + GA-rich Low_complexity Low_complexity 4 60 0 193 252 113 52 chr2 173064194 173064309 -77623545 + MIR SINE MIR 91 212 -50 307 239 33 33 chr2 173065030 173065122 -77622732 + MIR3 SINE MIR 96 187 -21 314 274 65 32 chr2 173065776 173065900 -77621954 - L1MC4 LINE L1 -1303 6739 6612 1816 149 23 36 chr2 173066447 173066631 -77621223 - AluJo SINE Alu -13 299 119 2417 78 0 0 chr2 173066631 173066924 -77620930 - AluSg SINE Alu -17 293 1 1816 149 23 36 chr2 173066924 173067040 -77620814 - AluJo SINE Alu -193 119 3 531 318 73 45 chr2 173067247 173067775 -77620079 + L2 LINE L2 2439 3091 -181 322 323 16 8 chr2 173068504 173068631 -77619223 + MIR SINE MIR 21 148 -114 2214 129 3 0 chr2 173069182 173069492 -77618362 - AluSx SINE Alu -1 311 1 265 305 17 0 chr2 173073580 173073639 -77614215 - L2 LINE L2 0 3272 3213 461 307 203 32 chr2 173073764 173074080 -77613774 - L1ME4a LINE L1 -469 5652 5283 309 290 65 0 chr2 173074238 173074331 -77613523 - L1ME LINE L1 -267 5854 5756 249 273 30 20 chr2 173074366 173074465 -77613389 - L1ME LINE L1 -489 5632 5533 2159 137 0 0 chr2 173074581 173074881 -77612973 - AluSx SINE Alu -12 300 1 772 302 59 23 chr2 173075514 173075905 -77611949 + LTR33 LTR ERVL 114 518 -3 583 140 0 15 chr2 173075912 173076048 -77611806 + (TG)n Simple_repeat Simple_repeat 2 135 0 183 194 28 0 chr2 173077637 173077673 -77610181 + L3 LINE CR1 1468 1504 -73 236 244 0 0 chr2 173079008 173079053 -77608801 - MIR SINE MIR -6 256 212 186 71 0 0 chr2 173079131 173079159 -77608695 + (CA)n Simple_repeat Simple_repeat 1 28 0 193 289 58 0 chr2 173079933 173079985 -77607869 + MIR3 SINE MIR 122 176 -32 780 252 124 14 chr2 173080096 173080314 -77607540 - MIR SINE MIR -14 248 7 902 261 73 93 chr2 173080348 173080755 -77607099 + L1ME3A LINE L1 5713 6112 -58 2301 91 0 7 chr2 173080755 173081052 -77606802 - AluY SINE Alu -16 295 1 902 261 73 93 chr2 173081052 173081096 -77606758 + L1ME3A LINE L1 6112 6155 -15 263 336 144 0 chr2 173081384 173081509 -77606345 + L2 LINE L2 3167 3309 -4 2278 61 0 0 chr2 173081665 173081942 -77605912 + AluY SINE Alu 33 309 -2 4926 146 79 67 chr2 173081996 173082250 -77605604 + L1MC2 LINE L1 5232 5481 -863 2267 109 3 3 chr2 173082250 173082552 -77605302 + AluSq SINE Alu 1 302 -11 4926 146 79 67 chr2 173082552 173082862 -77604992 + L1MC2 LINE L1 5481 5786 -558 2176 128 0 0 chr2 173082862 173083158 -77604696 - AluSx SINE Alu -16 296 1 4926 146 79 67 chr2 173083158 173083195 -77604659 + L1MC2 LINE L1 5786 5821 -523 1791 188 0 0 chr2 173083195 173083482 -77604372 - AluJo SINE Alu -25 287 1 4926 146 79 67 chr2 173083482 173083976 -77603878 + L1MC2 LINE L1 5821 6343 -1 208 139 0 0 chr2 173084896 173084932 -77602922 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 2212 153 140 8 chr2 173084963 173085341 -77602513 - MSTA LTR MaLR 0 428 1 10136 125 27 43 chr2 173085341 173086945 -77600909 - MSTA-int LTR MaLR 0 1580 3 2317 108 137 34 chr2 173086947 173087335 -77600519 - MSTA LTR MaLR 0 428 1 261 0 0 0 chr2 173087504 173087533 -77600321 + (T)n Simple_repeat Simple_repeat 1 29 0 582 180 0 0 chr2 173087593 173087728 -77600126 + AluSg/x SINE Alu 193 327 0 21 0 0 0 chr2 173087728 173087749 -77600105 + AT_rich Low_complexity Low_complexity 1 21 0 1794 177 0 3 chr2 173087872 173088177 -77599677 + AluSx SINE Alu 1 304 -8 347 175 0 0 chr2 173088435 173088492 -77599362 + L2 LINE L2 3214 3270 -2 683 244 56 11 chr2 173088565 173088745 -77599109 + MER5A DNA MER1_type 1 188 -1 563 252 18 0 chr2 173089319 173089430 -77598424 - MER81 DNA DNA -1 113 1 316 238 119 10 chr2 173090471 173090572 -77597282 + L2 LINE L2 2662 2773 -541 325 313 20 0 chr2 173090581 173090680 -77597174 + MER5A DNA MER1_type 9 109 -80 673 264 46 93 chr2 173090737 173090936 -77596918 + L2 LINE L2 2828 2998 -315 1470 57 0 0 chr2 173090936 173091113 -77596741 - AluY SINE Alu -1 310 134 673 264 46 93 chr2 173091113 173091330 -77596524 + L2 LINE L2 2998 3224 -89 431 223 45 0 chr2 173091357 173091469 -77596385 + MER5C DNA MER1_type 208 324 0 216 128 106 0 chr2 173091471 173091518 -77596336 + L2 LINE L2 3262 3313 0 2410 52 0 36 chr2 173091724 173092029 -77595825 - AluY SINE Alu -12 299 6 270 324 133 44 chr2 173092896 173093308 -77594546 - L2 LINE L2 -255 3017 2569 684 281 91 18 chr2 173093636 173093857 -77593997 - MIR SINE MIR 0 262 26 832 132 1 8 chr2 173093920 173094090 -77593764 + L1MDa LINE L1 2452 2612 -3928 369 282 107 7 chr2 173096556 173096705 -77591149 + MER103 DNA DNA 3 166 0 474 263 17 8 chr2 173096975 173097093 -77590761 + MIR3 SINE MIR 85 203 -5 542 215 29 70 chr2 173097219 173097391 -77590463 + L2 LINE L2 3148 3312 -1 412 261 28 72 chr2 173097526 173097706 -77590148 - MIR SINE MIR -87 175 4 260 322 51 25 chr2 173098093 173098211 -77589643 + MER103 DNA DNA 4 124 -42 236 91 23 0 chr2 173098368 173098412 -77589442 + (TTG)n Simple_repeat Simple_repeat 2 46 0 684 209 0 0 chr2 173098500 173098610 -77589244 + FLAM_A SINE Alu 8 117 -25 25 31 0 0 chr2 173098610 173098642 -77589212 + AT_rich Low_complexity Low_complexity 1 32 0 1696 149 4 11 chr2 173098735 173098997 -77588857 - AluJo SINE Alu -17 295 36 205 328 60 0 chr2 173099004 173099071 -77588783 - MIR SINE MIR -122 140 70 1836 172 0 10 chr2 173099151 173099465 -77588389 + AluJb SINE Alu 2 312 0 472 304 54 57 chr2 173099465 173100100 -77587754 + L1MC5 LINE L1 7131 7677 -284 1807 161 50 3 chr2 173101325 173101623 -77586231 + AluJb SINE Alu 1 312 0 817 148 0 0 chr2 173101718 173101833 -77586021 - AluJb SINE Alu -25 287 173 2376 97 0 3 chr2 173101843 173102152 -77585702 - AluSg SINE Alu -2 308 1 216 315 155 25 chr2 173103303 173103503 -77584351 - MIR SINE MIR -21 241 16 613 272 97 38 chr2 173103820 173104110 -77583744 - L2 LINE L2 -2 3311 3005 269 139 0 153 chr2 173104302 173104331 -77583523 - MER53 DNA DNA 0 189 175 1642 191 22 4 chr2 173104331 173104632 -77583222 + AluJo SINE Alu 1 306 0 269 139 0 153 chr2 173104632 173104667 -77583187 - MER53 DNA DNA -14 175 135 1119 131 96 0 chr2 173104667 173104865 -77582989 - Tigger1 DNA MER2_type 0 2418 2202 900 199 40 0 chr2 173104835 173105011 -77582843 - Tigger1 DNA MER2_type -2235 183 1 * 526 185 31 31 chr2 173105011 173105141 -77582713 - MER53 DNA DNA -59 130 1 21 0 0 0 chr2 173105268 173105289 -77582565 + AT_rich Low_complexity Low_complexity 1 21 0 3873 195 79 36 chr2 173106051 173106236 -77581618 - L1MC4 LINE L1 0 8042 7867 2373 95 0 10 chr2 173106236 173106541 -77581313 - AluSq SINE Alu -11 302 1 3873 195 79 36 chr2 173106541 173107363 -77580491 - L1MC4 LINE L1 -175 7867 6991 367 325 46 18 chr2 173107480 173107695 -77580159 - MIR SINE MIR -2 260 41 239 233 0 14 chr2 173109602 173109675 -77578179 + GA-rich Low_complexity Low_complexity 2 73 0 1425 148 0 0 chr2 173109698 173109915 -77577939 - L1PA13 LINE L1 0 6163 5947 2110 130 0 7 chr2 173110366 173110665 -77577189 + AluSc SINE Alu 1 297 -12 419 262 267 11 chr2 173111238 173111429 -77576425 - MIR SINE MIR 0 262 23 414 286 79 0 chr2 173111569 173111709 -77576145 - Charlie8 DNA MER1_type -2241 176 26 515 298 162 0 chr2 173112776 173112967 -77574887 - MIR SINE MIR -15 247 26 393 305 183 19 chr2 173114100 173114287 -77573567 + MIR SINE MIR 2 229 -33 2086 133 0 10 chr2 173114287 173114587 -77573267 + AluSg SINE Alu 1 297 -13 393 305 183 19 chr2 173114587 173114612 -77573242 + MIR SINE MIR 229 249 -13 234 293 35 0 chr2 173114649 173114707 -77573147 + MIR SINE MIR 34 93 -169 225 278 87 40 chr2 173114818 173114944 -77572910 + MIR SINE MIR 118 249 -13 647 243 32 132 chr2 173115145 173115494 -77572360 + MLT1L LTR MaLR 109 526 -89 236 324 29 0 chr2 173116084 173116189 -77571665 - Charlie3 DNA MER1_type -1106 1604 1497 322 276 41 10 chr2 173117641 173117739 -77570115 - MIR SINE MIR -91 117 17 37 39 0 0 chr2 173117941 173117992 -77569862 + AT_rich Low_complexity Low_complexity 1 51 0 312 167 0 17 chr2 173118556 173118616 -77569238 + L1MCa LINE L1 2006 2064 -4362 666 217 0 0 chr2 173118650 173118765 -77569089 - FLAM_A SINE Alu -18 115 1 943 174 26 37 chr2 173118769 173118959 -77568895 - MER20 DNA MER1_type -3 216 29 2331 105 0 3 chr2 173119076 173119382 -77568472 - AluSx SINE Alu -7 305 1 454 205 68 99 chr2 173120170 173120256 -77567598 - MER117 DNA MER1_type -40 157 70 1054 203 16 5 chr2 173120256 173120443 -77567411 + MER5A DNA MER1_type 1 189 0 746 229 72 0 chr2 173120452 173120618 -77567236 - MER5B DNA MER1_type 0 178 1 454 205 68 99 chr2 173120618 173120682 -77567172 - MER117 DNA MER1_type -135 62 2 228 35 0 0 chr2 173121057 173121086 -77566768 + (CA)n Simple_repeat Simple_repeat 2 30 0 2343 74 0 7 chr2 173122411 173122708 -77565146 - AluY SINE Alu -12 299 5 9550 56 1 0 chr2 173172904 173174198 -77513656 + L1P LINE L1 3146 4441 -1705 263 250 7 22 chr2 173174368 173174504 -77513350 + CT-rich Low_complexity Low_complexity 3 136 0 211 160 80 10 chr2 173174652 173174752 -77513102 + (CATCT)n Simple_repeat Simple_repeat 1 107 0 * 599 106 69 12 chr2 173174729 173174889 -77512965 + (CATTT)n Simple_repeat Simple_repeat 5 173 0 724 91 85 6 chr2 173174906 173175071 -77512783 + (CATTT)n Simple_repeat Simple_repeat 1 178 0 324 126 84 28 chr2 173175102 173175245 -77512609 + (CATCT)n Simple_repeat Simple_repeat 5 155 0 1339 199 60 18 chr2 173175335 173175672 -77512182 - AluJo SINE Alu 0 366 18 545 207 16 16 chr2 173175696 173175817 -77512037 - FLAM_A SINE Alu -12 121 1 223 219 0 0 chr2 173176107 173176148 -77511706 - L2 LINE L2 -10 3303 3263 621 100 20 10 chr2 173178635 173178735 -77509119 - AluY SINE Alu -210 101 1 390 257 15 15 chr2 173178739 173178875 -77508979 + L1M4 LINE L1 4895 5030 -1116 2084 165 18 0 chr2 173180910 173181249 -77506605 + MER7A DNA MER2_type 3 345 -1 718 189 0 16 chr2 173181463 173181590 -77506264 - FLAM_A SINE Alu -8 125 1 295 293 57 0 chr2 173181670 173181776 -77506078 - L1ME3A LINE L1 -28 6142 6031 2297 74 3 0 chr2 173181884 173182168 -77505686 + AluY SINE Alu 24 308 -3 611 189 61 17 chr2 173182169 173182349 -77505505 + L1M4 LINE L1 4362 4549 -1597 691 114 53 35 chr2 173182352 173182466 -77505388 + MLT2D LTR ERVL 125 240 -174 287 145 14 0 chr2 173182476 173182545 -77505309 + (CA)n Simple_repeat Simple_repeat 2 71 0 313 70 0 23 chr2 173182545 173182588 -77505266 + MLT2D LTR ERVL 367 408 -6 260 301 105 15 chr2 173182936 173183069 -77504785 - MIR3 SINE MIR -27 181 37 1080 194 107 51 chr2 173183328 173183720 -77504134 + LTR37A LTR ERV1 13 426 0 257 50 0 25 chr2 173183872 173183912 -77503942 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 527 319 47 4 chr2 173183956 173184191 -77503663 - L1ME LINE L1 -543 5621 5377 396 286 34 23 chr2 173184710 173184885 -77502969 - L2 LINE L2 -5 3308 3132 294 304 11 0 chr2 173184951 173185043 -77502811 + L3 LINE CR1 1139 1231 -346 585 242 37 12 chr2 173185067 173185228 -77502626 + MER5A DNA MER1_type 25 189 0 402 348 84 22 chr2 173185228 173185549 -77502305 + L3 LINE CR1 1226 1566 -11 2531 69 13 0 chr2 173185587 173185891 -77501963 + AluSp SINE Alu 1 308 -5 657 230 10 83 chr2 173186085 173186289 -77501565 + MER5A DNA MER1_type 1 189 0 1707 60 0 64 chr2 173186649 173186883 -77500971 - AluSq SINE Alu -94 219 1 2313 113 0 0 chr2 173189676 173189987 -77497867 - AluY SINE Alu 0 311 1 21 0 0 0 chr2 173190034 173190055 -77497799 + AT_rich Low_complexity Low_complexity 1 21 0 581 253 52 13 chr2 173190076 173190230 -77497624 - MIR SINE MIR -90 172 13 522 163 22 0 chr2 173191892 173191984 -77495870 + AluSg/x SINE Alu 185 278 -32 3711 174 34 11 chr2 173191984 173192710 -77495144 + L1MB1 LINE L1 5426 6168 0 827 238 144 60 chr2 173192877 173193378 -77494476 - MER39 LTR ERV1 -3 704 1 321 291 54 47 chr2 173193483 173193631 -77494223 + MIR SINE MIR 63 211 -51 1130 229 89 68 chr2 173195048 173195506 -77492348 + MER110A LTR ERV1 1 468 0 1062 200 15 5 chr2 173195680 173195875 -77491979 + AluJ SINE Alu 1 197 -115 1670 160 100 32 chr2 173195879 173196333 -77491521 + LTR10A LTR ERV1 1 548 -61 669 125 0 0 chr2 173196348 173196444 -77491410 + AluJ SINE Alu 200 295 -17 639 168 16 40 chr2 173196764 173196889 -77490965 - Tigger3b DNA MER2_type 0 1231 1110 363 263 44 22 chr2 173196890 173197027 -77490827 + MER65B LTR ERV1 1 140 -391 5423 148 53 31 chr2 173197387 173197599 -77490255 - Tigger3b DNA MER2_type -1914 1114 908 189 74 0 0 chr2 173197599 173197626 -77490228 + (TGAG)n Simple_repeat Simple_repeat 1 27 0 5423 148 53 31 chr2 173197626 173197762 -77490092 - Tigger3b DNA MER2_type -2120 908 776 2416 71 3 3 chr2 173197762 173198058 -77489796 + AluY SINE Alu 1 296 -15 5423 148 53 31 chr2 173198058 173198798 -77489056 - Tigger3b DNA MER2_type -2252 776 1 2204 118 0 22 chr2 173199968 173200281 -77487573 + AluSg SINE Alu 1 306 -4 1022 204 73 36 chr2 173200460 173200680 -77487174 + MER8 DNA MER2_type 11 238 -1 1139 135 0 0 chr2 173201063 173201233 -77486621 + AluY SINE Alu 127 296 -15 948 163 0 0 chr2 173201235 173201376 -77486478 - FRAM SINE Alu -32 144 4 304 287 149 6 chr2 173201587 173201768 -77486086 - MIR SINE MIR -7 255 49 2130 119 27 0 chr2 173202940 173203235 -77484619 - AluSg SINE Alu -7 303 1 2261 102 10 0 chr2 173203693 173203986 -77483868 + AluSc SINE Alu 1 296 -13 812 188 110 47 chr2 173204242 173204289 -77483565 + MER33 DNA MER1_type 5 48 -2537 2457 99 0 3 chr2 173204289 173204602 -77483252 + AluSq SINE Alu 1 312 -1 812 188 110 47 chr2 173204602 173204809 -77483045 + MER33 DNA MER1_type 48 275 -49 2160 113 10 0 chr2 173204817 173205109 -77482745 + AluSx SINE Alu 2 296 -16 915 197 0 0 chr2 173205199 173205351 -77482503 + FRAM SINE Alu 1 146 -30 207 0 0 0 chr2 173205355 173205378 -77482476 + (CAA)n Simple_repeat Simple_repeat 2 24 0 286 250 83 31 chr2 173206488 173206584 -77481270 - L2 LINE L2 -25 3288 3188 2053 101 7 21 chr2 173207337 173207669 -77480185 - AluSg SINE Alu 0 328 1 917 157 3 24 chr2 173207992 173208312 -77479542 + MLT1B LTR MaLR 1 386 -4 2118 185 65 2 chr2 173209651 173210079 -77477775 + MLT1C LTR MaLR 13 467 0 570 297 118 60 chr2 173210146 173210462 -77477392 - L2 LINE L2 -6 3307 3011 2087 84 11 14 chr2 173210462 173210747 -77477107 + AluY SINE Alu 21 304 -7 570 297 118 60 chr2 173210747 173211012 -77476842 - L2 LINE L2 -302 3011 2714 2226 100 13 7 chr2 173211022 173211323 -77476531 - AluSx SINE Alu -9 303 1 1379 169 28 12 chr2 173211409 173211658 -77476196 - MLT1C LTR MaLR -212 255 3 321 330 16 32 chr2 173211684 173211869 -77475985 - L2 LINE L2 -1645 1669 1488 962 240 71 49 chr2 173211969 173212336 -77475518 - L2 LINE L2 0 3313 2939 3513 225 39 12 chr2 173212336 173213077 -77474777 + L1M4 LINE L1 4000 4769 -1377 2123 121 7 3 chr2 173213077 173213367 -77474487 + AluSq SINE Alu 1 291 -22 3513 225 39 12 chr2 173213367 173213502 -77474352 + L1M4 LINE L1 4769 4899 -1247 752 88 0 0 chr2 173213504 173213606 -77474248 - AluSg/x SINE Alu -10 302 201 2214 92 30 0 chr2 173213991 173214286 -77473568 + AluSp SINE Alu 1 304 -9 2344 103 3 0 chr2 173214292 173214592 -77473262 + AluSq SINE Alu 1 301 -12 2077 112 30 3 chr2 173216872 173217168 -77470686 + AluSx SINE Alu 1 304 -8 2289 146 54 54 chr2 173217622 173217670 -77470184 - MSTB LTR MaLR -2 424 377 2074 122 3 23 chr2 173217670 173217974 -77469880 - AluSx SINE Alu -14 298 1 2289 146 54 54 chr2 173217974 173218349 -77469505 - MSTB LTR MaLR -48 378 1 355 254 79 9 chr2 173218559 173218673 -77469181 - MARNA DNA Mariner -313 273 152 795 212 47 52 chr2 173219941 173220153 -77467701 - MIR SINE MIR -39 223 13 1935 103 92 0 chr2 173221680 173221951 -77465903 + AluSx SINE Alu 1 296 -16 3980 169 60 69 chr2 173222559 173222622 -77465232 - L1MB7 LINE L1 -9 6175 6113 2515 78 3 0 chr2 173222622 173222931 -77464923 + AluSp SINE Alu 1 310 -3 3980 169 60 69 chr2 173222931 173223846 -77464008 - L1MB7 LINE L1 -71 6113 5190 2144 128 3 0 chr2 173223846 173224151 -77463703 - AluSx SINE Alu -6 306 1 3980 169 60 69 chr2 173224151 173224510 -77463344 - L1MB7 LINE L1 -994 5190 4860 2429 80 3 3 chr2 173224510 173224809 -77463045 + AluSp SINE Alu 1 299 -14 3980 169 60 69 chr2 173224809 173224886 -77462968 - L1MB7 LINE L1 -1324 4860 4784 473 342 50 67 chr2 173225082 173225469 -77462385 + L2 LINE L2 2804 3184 -88 1736 176 4 0 chr2 173225469 173225799 -77462055 - AluJb SINE Alu 0 334 4 473 342 50 67 chr2 173225799 173225886 -77461968 + L2 LINE L2 3184 3271 -1 2474 86 0 13 chr2 173225932 173226247 -77461607 - AluY SINE Alu 0 311 1 958 254 146 60 chr2 173226750 173227202 -77460652 - MLT1K LTR MaLR 0 588 98 2304 107 0 19 chr2 173227256 173227575 -77460279 + AluSp SINE Alu 1 313 0 1783 172 3 17 chr2 173228059 173228356 -77459498 - AluJo SINE Alu -19 293 1 2201 143 42 89 chr2 173228602 173228854 -77459000 + LTR47A LTR ERVL 1 222 -230 4699 155 39 14 chr2 173228854 173229660 -77458194 - LTR1B LTR ERV1 0 826 1 2201 143 42 89 chr2 173229660 173229881 -77457973 + LTR47A LTR ERVL 222 452 0 349 330 84 66 chr2 173230001 173230334 -77457520 + L2 LINE L2 2932 3270 -2 599 285 93 71 chr2 173230337 173230396 -77457458 - MLT1L LTR MaLR -2 613 557 1009 203 22 36 chr2 173230396 173230618 -77457236 - MER20 DNA MER1_type 0 219 1 599 285 93 71 chr2 173230618 173230968 -77456886 - MLT1L LTR MaLR -58 557 195 351 0 0 0 chr2 173231325 173231364 -77456490 + (CA)n Simple_repeat Simple_repeat 2 40 0 412 111 0 0 chr2 173231366 173231429 -77456425 - Alu SINE Alu -7 304 242 251 243 54 27 chr2 173231560 173231634 -77456220 - Charlie8 DNA MER1_type -2339 78 3 203 313 0 0 chr2 173233949 173234013 -77453841 - L2 LINE L2 -74 3239 3176 2098 193 48 5 chr2 173234068 173234504 -77453350 + MLT1C LTR MaLR 10 464 -3 1060 219 9 22 chr2 173234683 173234911 -77452943 - MIR SINE MIR -26 236 12 217 291 29 48 chr2 173236071 173236174 -77451680 + MIR SINE MIR 119 219 -43 384 256 55 73 chr2 173236311 173236339 -77451515 + L1PA16 LINE L1 5666 5693 -473 2572 57 0 22 chr2 173236339 173236654 -77451200 + AluY SINE Alu 1 308 -3 384 256 55 73 chr2 173236654 173236844 -77451010 + L1PA16 LINE L1 5693 5880 -286 * 1748 163 28 53 chr2 173236661 173237017 -77450837 + L1ME1 LINE L1 5691 6037 -129 730 172 93 7 chr2 173237043 173237194 -77450660 - MLT1C LTR MaLR -294 173 10 200 297 31 0 chr2 173237246 173237310 -77450544 + L2 LINE L2 3171 3236 -77 2073 140 0 0 chr2 173238330 173238630 -77449224 - AluSx SINE Alu -12 300 1 633 286 55 28 chr2 173238739 173238956 -77448898 - MIR SINE MIR -12 250 28 2114 132 23 0 chr2 173240012 173240315 -77447539 + AluSx SINE Alu 1 310 -2 201 277 0 0 chr2 173241176 173241223 -77446631 + L2 LINE L2 3267 3313 0 325 351 0 0 chr2 173245353 173245467 -77442387 - MIR3 SINE MIR -4 204 91 524 226 17 0 chr2 173245484 173245599 -77442255 + MIR SINE MIR 29 145 -117 208 232 0 36 chr2 173246480 173246536 -77441318 + GA-rich Low_complexity Low_complexity 1 54 0 1352 199 96 34 chr2 173247113 173247635 -77440219 + LTR48 LTR ERV1 1 787 0 267 304 43 0 chr2 173247637 173247706 -77440148 + L2 LINE L2 3228 3299 -14 546 119 0 0 chr2 173247720 173247804 -77440050 + (GGAA)n Simple_repeat Simple_repeat 3 86 0 1279 104 0 0 chr2 173249734 173249907 -77437947 - AluSq SINE Alu -4 309 137 1083 221 41 73 chr2 173249908 173250074 -77437780 - MER39 LTR ERV1 -8 684 514 2358 74 0 7 chr2 173250074 173250371 -77437483 - AluY SINE Alu -16 295 1 1083 221 41 73 chr2 173250371 173250658 -77437196 - MER39 LTR ERV1 -178 514 68 251 184 20 0 chr2 173250650 173250699 -77437155 - MER34 LTR ERV1 -491 51 2 * 201 256 0 0 chr2 173250715 173250758 -77437096 + CT-rich Low_complexity Low_complexity 3 45 0 1606 164 65 11 chr2 173250780 173251055 -77436799 + AluJo SINE Alu 3 292 -20 251 83 67 0 chr2 173251055 173251115 -77436739 + (TA)n Simple_repeat Simple_repeat 1 64 0 199 203 170 56 chr2 173252672 173252774 -77435080 + MIR SINE MIR 34 132 -76 2126 151 0 0 chr2 173252948 173253260 -77434594 - AluSx SINE Alu 0 312 1 3074 188 45 13 chr2 173253585 173253943 -77433911 - MLT1F1 LTR MaLR 0 567 183 216 0 0 0 chr2 173253943 173253967 -77433887 + (TTGGGG)n Simple_repeat Simple_repeat 1 24 0 3074 188 45 13 chr2 173253967 173254157 -77433697 - MLT1F1 LTR MaLR -384 183 1 1254 256 54 6 chr2 173255298 173255634 -77432220 + L1MEc LINE L1 324 675 -5721 1908 124 8 4 chr2 173255636 173255902 -77431952 - AluSx SINE Alu -14 298 32 2085 214 53 50 chr2 173255903 173255981 -77431873 + L1MEc LINE L1 2762 2838 -3377 2330 65 17 0 chr2 173255981 173256271 -77431583 + AluY SINE Alu 1 295 -16 2085 214 53 50 chr2 173256271 173256874 -77430980 + L1MEc LINE L1 2838 3445 -2770 1809 217 32 40 chr2 173256864 173257362 -77430492 + L1MEc LINE L1 3930 4423 -1792 * 274 344 48 16 chr2 173257993 173258182 -77429672 - LTR67 LTR ERVL 0 557 363 227 317 30 30 chr2 173258339 173258440 -77429414 - LTR67 LTR ERVL -358 199 99 397 206 29 81 chr2 173258907 173259043 -77428811 - MER63 DNA MER1_type -81 755 1 2309 105 0 6 chr2 173259345 173259659 -77428195 + AluSx SINE Alu 1 312 0 1676 180 48 42 chr2 173260549 173260563 -77427291 + L1MB5 LINE L1 5785 5797 -377 2045 119 0 7 chr2 173260563 173260874 -77426980 + AluSx SINE Alu 1 309 0 1676 180 48 42 chr2 173260874 173260966 -77426888 + L1MB5 LINE L1 5797 5887 -287 652 190 86 0 chr2 173260966 173261082 -77426772 - FLAM_C SINE Alu -7 126 1 1676 180 48 42 chr2 173261082 173261357 -77426497 + L1MB5 LINE L1 5887 6165 -9 250 234 119 145 chr2 173261377 173261480 -77426374 + MIR SINE MIR 1 105 -157 1978 143 20 0 chr2 173261480 173261780 -77426074 - AluSx SINE Alu -6 306 1 250 234 119 145 chr2 173261780 173261945 -77425909 + MIR SINE MIR 105 262 0 463 289 82 0 chr2 173262181 173262316 -77425538 - MER117 DNA MER1_type -49 148 3 1198 259 92 0 chr2 173262572 173262854 -77425000 + MLT1E2 LTR MaLR 319 626 0 468 310 78 59 chr2 173262854 173263353 -77424501 + L2 LINE L2 2495 3010 -262 467 338 75 4 chr2 173263770 173264010 -77423844 - MIR SINE MIR -3 259 3 1829 87 0 9 chr2 173264681 173264911 -77422943 + AluSq SINE Alu 1 228 -85 330 291 55 0 chr2 173265481 173265663 -77422191 + L1ME4a LINE L1 5208 5399 -747 777 298 110 31 chr2 173266178 173266560 -77421294 + L1ME4a LINE L1 5445 5894 -227 988 168 26 37 chr2 173266560 173266751 -77421103 - MER5A DNA MER1_type 0 189 1 777 298 110 31 chr2 173266751 173266975 -77420879 + L1ME4a LINE L1 5894 6099 -22 369 268 119 31 chr2 173267736 173267855 -77419999 - MIR SINE MIR -44 218 74 981 53 83 30 chr2 173267855 173267987 -77419867 - MER85 DNA T2_type 0 139 1 369 268 119 31 chr2 173267987 173268061 -77419793 - MIR SINE MIR -188 74 8 1120 130 5 16 chr2 173268145 173268329 -77419525 + AluSg/x SINE Alu 129 310 0 252 336 52 43 chr2 173268677 173268793 -77419061 - L2 LINE L2 -1 3271 3155 357 219 47 55 chr2 173268878 173269006 -77418848 - MER103 DNA DNA -9 157 31 338 328 47 29 chr2 173269033 173269204 -77418650 - MER5B DNA MER1_type -4 174 1 605 75 0 0 chr2 173269207 173269287 -77418567 + AluSg/x SINE Alu 219 298 -11 2059 93 0 18 chr2 173269435 173269714 -77418140 + AluSg1 SINE Alu 27 300 -9 608 249 99 28 chr2 173269994 173270247 -77417607 + MLT1J1 LTR MaLR 1 271 -175 31 44 0 0 chr2 173270581 173270626 -77417228 + AT_rich Low_complexity Low_complexity 1 45 0 1522 133 0 5 chr2 173270628 173270846 -77417008 - AluSg/x SINE Alu -15 295 79 2395 82 13 0 chr2 173270850 173271153 -77416701 - AluSp SINE Alu -6 307 1 1219 189 72 18 chr2 173271155 173271377 -77416477 - MER8 DNA MER2_type 0 239 6 2862 217 48 75 chr2 173271380 173271865 -77415989 + MER21B LTR ERV1 18 474 -389 2414 97 0 3 chr2 173271865 173272176 -77415678 - AluSq SINE Alu -2 311 2 2862 217 48 75 chr2 173272176 173272500 -77415354 + MER21B LTR ERV1 474 805 -58 1036 62 78 0 chr2 173275821 173275950 -77411904 + MER85 DNA T2_type 1 139 0 21 0 0 0 chr2 173276263 173276284 -77411570 + AT_rich Low_complexity Low_complexity 1 21 0 2388 104 0 0 chr2 173276733 173277032 -77410822 + AluSx SINE Alu 1 299 -13 501 183 8 0 chr2 173277391 173277493 -77410361 - MER5A DNA MER1_type -83 106 4 1118 158 0 0 chr2 173277802 173277973 -77409881 - AluJo/FRAM SINE Alu -8 304 134 1500 162 118 0 chr2 173277973 173278244 -77409610 - AluJb SINE Alu -9 303 1 297 216 181 9 chr2 173278938 173279054 -77408800 - MIR3 SINE MIR -38 170 35 389 184 110 55 chr2 173279278 173279387 -77408467 + MER5C DNA MER1_type 210 324 0 1674 159 48 7 chr2 173279688 173279959 -77407895 - AluJo SINE Alu -30 282 1 31 0 0 0 chr2 173279960 173279991 -77407863 + AT_rich Low_complexity Low_complexity 1 31 0 227 277 62 0 chr2 173280049 173280114 -77407740 - L2 LINE L2 -4 3268 3200 587 303 80 36 chr2 173280151 173280402 -77407452 - L2 LINE L2 -655 2659 2398 738 220 29 12 chr2 173280585 173280758 -77407096 - MLT1I LTR MaLR -2 407 232 377 184 40 0 chr2 173280919 173280995 -77406859 - MIR SINE MIR -70 192 114 900 273 88 31 chr2 173281304 173281692 -77406162 + L2 LINE L2 2494 2903 -411 255 307 21 94 chr2 173281776 173281968 -77405886 + L2 LINE L2 3115 3292 -21 221 253 0 13 chr2 173282019 173282098 -77405756 + (TAA)n Simple_repeat Simple_repeat 3 80 0 707 258 129 9 chr2 173282159 173282384 -77405470 - MIR SINE MIR 0 262 11 317 322 13 20 chr2 173283413 173283562 -77404292 - L3b LINE CR1 -332 1251 1104 1741 277 98 7 chr2 173283986 173284589 -77403265 - L1MC4a LINE L1 -1897 5911 5254 530 172 0 30 chr2 173284593 173284692 -77403162 + MER21B LTR ERV1 1 96 -767 1626 220 83 45 chr2 173284736 173285366 -77402488 + MER21B LTR ERV1 102 803 -60 515 316 142 0 chr2 173286523 173286735 -77401119 + MIR SINE MIR 21 262 0 21 0 0 0 chr2 173287352 173287373 -77400481 + AT_rich Low_complexity Low_complexity 1 21 0 251 154 0 19 chr2 173288821 173288873 -77398981 + (CCTA)n Simple_repeat Simple_repeat 1 51 0 275 258 8 62 chr2 173288975 173288988 -77398866 - L1ME LINE L1 -345 5776 5764 1638 195 3 17 chr2 173288988 173289280 -77398574 - AluJo SINE Alu -24 288 1 275 258 8 62 chr2 173289280 173289395 -77398459 - L1ME LINE L1 -357 5764 5652 231 369 54 8 chr2 173289550 173289680 -77398174 + MIR3 SINE MIR 5 140 -68 2348 97 0 0 chr2 173290621 173290919 -77396935 + AluSc SINE Alu 1 298 -11 366 317 37 45 chr2 173291059 173291305 -77396549 + L1MDa LINE L1 22 265 -6275 22 70 0 0 chr2 173291576 173291619 -77396235 + AT_rich Low_complexity Low_complexity 1 43 0 21 71 0 0 chr2 173292001 173292043 -77395811 + AT_rich Low_complexity Low_complexity 1 42 0 216 0 0 0 chr2 173294368 173294392 -77393462 + (TG)n Simple_repeat Simple_repeat 1 24 0 399 41 0 0 chr2 173295313 173295362 -77392492 + (TG)n Simple_repeat Simple_repeat 1 49 0 203 228 88 0 chr2 173296024 173296081 -77391773 - MIR SINE MIR -12 250 189 489 274 75 122 chr2 173297134 173297602 -77390252 + L2 LINE L2 2827 3272 0 428 214 377 0 chr2 173297785 173297939 -77389915 - MIR SINE MIR -7 255 44 1810 129 25 74 chr2 173297969 173298294 -77389560 - AluJo SINE Alu -3 309 1 1156 99 6 12 chr2 173298893 173299054 -77388800 - AluSp SINE Alu -153 160 1 891 178 100 17 chr2 173299067 173299112 -77388742 + AluJo SINE Alu 78 118 -194 225 0 0 0 chr2 173299112 173299137 -77388717 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 891 178 100 17 chr2 173299137 173299271 -77388583 + AluJo SINE Alu 118 272 -40 216 158 0 0 chr2 173299630 173299668 -77388186 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 209 322 58 0 chr2 173299668 173299755 -77388099 - L2 LINE L2 -28 3244 3153 190 326 61 39 chr2 173300025 173300255 -77387599 - L2 LINE L2 -464 2850 2616 186 336 62 35 chr2 173300533 173300646 -77387208 + L2 LINE L2 3162 3277 -36 1208 261 108 50 chr2 173300822 173301035 -77386819 - MLT1H1 LTR MaLR -6 549 350 5242 136 58 35 chr2 173301035 173301982 -77385872 - LTR5 LTR ERVK 0 969 1 1208 261 108 50 chr2 173301982 173302285 -77385569 - MLT1H1 LTR MaLR -205 350 3 216 303 296 0 chr2 173302298 173302450 -77385404 + MIR SINE MIR 66 262 0 906 259 103 66 chr2 173304819 173305198 -77382656 - MLT1J1 LTR MaLR -52 394 2 1831 79 0 9 chr2 173305659 173305887 -77381967 + AluSq SINE Alu 3 228 -85 310 291 55 0 chr2 173306457 173306639 -77381215 + L1ME4a LINE L1 5208 5399 -747 682 292 116 35 chr2 173307154 173307536 -77380318 + L1ME4a LINE L1 5445 5895 -226 908 178 26 37 chr2 173307536 173307727 -77380127 - MER5A DNA MER1_type 0 189 1 682 292 116 35 chr2 173307727 173307950 -77379904 + L1ME4a LINE L1 5895 6099 -22 189 309 138 21 chr2 173308702 173308796 -77379058 - MIR SINE MIR -41 221 117 1041 191 11 0 chr2 173309855 173310038 -77377816 + MER5A DNA MER1_type 1 185 -4 245 311 90 0 chr2 173310047 173310169 -77377685 + L2 LINE L2 2553 2685 -629 884 242 125 49 chr2 173310329 173310697 -77377157 + MSTD LTR MaLR 1 396 0 219 239 155 14 chr2 173311393 173311464 -77376390 + L2 LINE L2 2980 3060 -253 329 175 0 35 chr2 173311821 173311935 -77375919 + GA-rich Low_complexity Low_complexity 1 110 0 212 243 43 43 chr2 173312182 173312252 -77375602 + L2 LINE L2 3198 3267 -5 807 221 17 6 chr2 173312325 173312506 -77375348 + L1ME1 LINE L1 5979 6161 -5 268 281 12 0 chr2 173313005 173313087 -77374767 + MER103 DNA DNA 2 84 -82 327 261 108 40 chr2 173315406 173315582 -77372272 - L1ME4a LINE L1 -2 6119 5932 5343 134 26 32 chr2 173316205 173317195 -77370659 - L1MA4A LINE L1 0 7365 6382 6376 88 5 17 chr2 173317207 173319017 -77368837 - L1PA14 LINE L1 -17 6144 4345 2582 208 93 5 chr2 173319019 173319678 -77368176 + L1P LINE L1 2652 3368 -2778 * 3953 168 28 8 chr2 173319672 173320462 -77367392 - L1MA4A LINE L1 -815 6393 5588 2643 224 159 9 chr2 173320459 173321194 -77366660 - L1MA4A LINE L1 -6342 867 23 * 244 237 26 26 chr2 173322057 173322133 -77365721 + MER116 DNA Mariner 5 80 0 567 311 63 28 chr2 173322641 173322959 -77364895 - L1ME4a LINE L1 -214 5956 5628 924 291 57 18 chr2 173323001 173323104 -77364750 - L1ME4a LINE L1 -834 5312 5214 2030 113 27 14 chr2 173323104 173323396 -77364458 - AluSx SINE Alu -16 296 1 924 291 57 18 chr2 173323396 173323855 -77363999 - L1ME4a LINE L1 -932 5214 4728 306 308 96 10 chr2 173324253 173324451 -77363403 - L1ME4a LINE L1 -1445 4701 4487 383 146 45 0 chr2 173324497 173324586 -77363268 - L1MB3 LINE L1 -1 6182 6090 15584 181 34 13 chr2 173324595 173328699 -77359155 - L1MA4 LINE L1 -281 6201 1936 2251 110 3 3 chr2 173328699 173329008 -77358846 + AluSq SINE Alu 1 309 -4 15584 181 34 13 chr2 173329008 173330985 -77356869 - L1MA4 LINE L1 -4546 1936 2 292 209 70 23 chr2 173331121 173331207 -77356647 - L1P LINE L1 -2016 4130 4041 662 306 146 35 chr2 173331854 173332367 -77355487 - L1ME4a LINE L1 -2923 3223 2654 1668 142 46 3 chr2 173332410 173332692 -77355162 + L1MC1 LINE L1 6034 6327 -6 297 296 21 86 chr2 173333431 173333617 -77354237 - HAL1 LINE L1 -797 1710 1537 2306 155 48 10 chr2 173334388 173334800 -77353054 - MSTA LTR MaLR 0 428 1 195 351 0 0 chr2 173334882 173334939 -77352915 - L2 LINE L2 -9 3263 3207 2314 98 0 16 chr2 173336126 173336432 -77351422 + AluSg1 SINE Alu 1 301 -8 1898 151 71 0 chr2 173336521 173336845 -77351009 + MER7A DNA MER2_type 2 346 0 305 258 38 75 chr2 173336881 173337040 -77350814 + L2 LINE L2 3161 3313 0 893 279 16 13 chr2 173337216 173337464 -77350390 - MIR SINE MIR -3 259 13 768 275 68 5 chr2 173337830 173338052 -77349802 + MLT1I LTR MaLR 4 239 -170 225 0 0 0 chr2 173339606 173339631 -77348223 + (T)n Simple_repeat Simple_repeat 1 25 0 449 312 130 22 chr2 173340736 173340967 -77346887 - L1MC4a LINE L1 -1875 5933 5678 380 328 69 22 chr2 173340968 173341200 -77346654 - L1MC4a LINE L1 -2182 5626 5384 873 114 0 0 chr2 173341204 173341335 -77346519 - L1PA13 LINE L1 -3 6160 6030 583 322 44 33 chr2 173341610 173342184 -77345670 - L1MC4a LINE L1 -1914 5894 5315 2383 115 0 6 chr2 173342184 173342498 -77345356 - AluSx SINE Alu 0 312 1 374 336 30 62 chr2 173342542 173342914 -77344940 - L1MC4a LINE L1 -875 5271 4912 25 0 0 0 chr2 173343466 173343491 -77344363 + AT_rich Low_complexity Low_complexity 1 25 0 639 235 8 0 chr2 173343498 173343617 -77344237 - FLAM_A SINE Alu -13 120 1 1500 265 58 14 chr2 173343618 173344101 -77343753 - MLT1H1 LTR MaLR -30 525 22 1425 170 0 26 chr2 173344770 173345000 -77342854 + AluJo SINE Alu 85 308 -4 1408 198 32 7 chr2 173345308 173345616 -77342238 - MER66A LTR ERV1 0 478 163 300 208 56 14 chr2 173345764 173345836 -77342018 + L2 LINE L2 3236 3310 -3 248 294 145 98 chr2 173347092 173347429 -77340425 + L2 LINE L2 2920 3272 0 2469 144 7 14 chr2 173347487 173347916 -77339938 - L1MB5 LINE L1 -9 6165 5740 2083 95 34 39 chr2 173347921 173348112 -77339742 - MER4E LTR ERV1 -4 762 572 2243 109 3 10 chr2 173348112 173348423 -77339431 + AluSq SINE Alu 1 309 -4 2083 95 34 39 chr2 173348423 173348588 -77339266 - MER4E LTR ERV1 -194 572 408 793 156 161 17 chr2 173348587 173348767 -77339087 - MER4B LTR ERV1 -403 207 2 * 2614 198 42 11 chr2 173348768 173349798 -77338056 - L1MB5 LINE L1 -432 5742 4681 310 355 117 0 chr2 173350885 173351082 -77336772 + MIR SINE MIR 30 249 -13 21 0 0 0 chr2 173351107 173351128 -77336726 + AT_rich Low_complexity Low_complexity 1 21 0 192 40 0 0 chr2 173351585 173351610 -77336244 + (CA)n Simple_repeat Simple_repeat 2 26 0 2099 107 28 0 chr2 173353046 173353337 -77334517 - AluSx SINE Alu -13 299 1 778 311 16 24 chr2 173353365 173353614 -77334240 - MIR SINE MIR -5 257 11 231 292 0 14 chr2 173353888 173353960 -77333894 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 226 324 157 15 chr2 173354166 173354370 -77333484 - L3b LINE CR1 -8 1575 1343 512 335 28 6 chr2 173355037 173355216 -77332638 - MER5A DNA MER1_type -3 186 4 339 238 12 0 chr2 173355509 173355593 -77332261 + MER103 DNA DNA 2 86 -80 378 294 35 46 chr2 173355687 173355870 -77331984 + MIR SINE MIR 34 212 -50 712 323 31 4 chr2 173356817 173357071 -77330783 - MIR SINE MIR 0 262 2 1806 266 45 19 chr2 173357094 173357850 -77330004 + L1M4c LINE L1 1059 1834 -4550 1053 177 0 43 chr2 173357894 173358080 -77329774 - AluJo SINE Alu -134 178 1 241 192 26 26 chr2 173358358 173358436 -77329418 + (TA)n Simple_repeat Simple_repeat 1 78 0 923 211 0 0 chr2 173358674 173358840 -77329014 + FAM SINE Alu 1 166 -9 319 305 69 22 chr2 173358863 173359227 -77328627 + L1M4c LINE L1 3193 3573 -2809 2337 97 0 0 chr2 173359566 173359865 -77327989 + AluSc SINE Alu 1 299 -10 617 264 181 0 chr2 173361281 173361497 -77326357 + MIR SINE MIR 8 262 0 562 236 31 6 chr2 173362378 173362539 -77325315 + LTR41 LTR ERVL 23 187 -586 706 190 15 88 chr2 173362801 173362921 -77324933 + LTR41 LTR ERVL 584 684 -89 2428 82 3 13 chr2 173362921 173363237 -77324617 - AluSq SINE Alu 0 313 1 706 190 15 88 chr2 173363237 173363321 -77324533 + LTR41 LTR ERVL 684 773 0 31 0 0 0 chr2 173364040 173364071 -77323783 + AT_rich Low_complexity Low_complexity 1 31 0 2207 117 0 0 chr2 173364834 173365132 -77322722 + AluSg SINE Alu 1 298 -12 300 53 18 35 chr2 173365590 173365647 -77322207 + (TA)n Simple_repeat Simple_repeat 2 57 0 1740 174 7 0 chr2 173365647 173365929 -77321925 - AluJb SINE Alu -28 284 1 322 267 15 47 chr2 173366341 173366497 -77321357 + L1ME LINE L1 5676 5825 -341 280 59 23 19 chr2 173366592 173366650 -77321204 + AluSp SINE Alu 120 170 -133 2283 100 3 3 chr2 173366781 173367081 -77320773 + AluSg SINE Alu 1 300 -10 274 337 142 3 chr2 173368860 173369000 -77318854 - MIR3 SINE MIR -44 164 7 1808 198 21 17 chr2 173369801 173370077 -77317777 - L1 LINE L1 -847 5299 5026 2351 86 0 0 chr2 173370077 173370368 -77317486 - AluY SINE Alu -20 291 1 1808 198 21 17 chr2 173370368 173370976 -77316878 - L1 LINE L1 -1120 5026 4336 1160 130 0 12 chr2 173370976 173371168 -77316686 + AluSg/x SINE Alu 118 307 0 2544 50 7 0 chr2 173371187 173371488 -77316366 - AluSg SINE Alu -7 303 1 1263 178 28 68 chr2 173371492 173371788 -77316066 - L1 LINE L1 -1834 4312 4031 4427 91 9 14 chr2 173371788 173372426 -77315428 - MER41B LTR ERV1 0 635 1 1263 178 28 68 chr2 173372426 173372483 -77315371 - L1 LINE L1 -2115 4031 3973 1289 249 25 8 chr2 173372487 173372889 -77314965 - L1ME LINE L1 -486 5680 5272 7143 47 9 0 chr2 173372892 173374064 -77313790 - L1PA5 LINE L1 0 6154 4970 47 61 0 0 chr2 173374121 173374203 -77313651 + AT_rich Low_complexity Low_complexity 1 82 0 1954 165 75 141 chr2 173375346 173375729 -77312125 + MER82 DNA MER2_type 1 408 -245 2232 97 7 0 chr2 173375729 173376028 -77311826 - AluSp SINE Alu -12 301 1 1648 171 17 31 chr2 173376030 173376322 -77311532 - AluJo SINE Alu -20 292 5 1954 165 75 141 chr2 173376322 173376603 -77311251 + MER82 DNA MER2_type 409 624 -29 1142 209 82 42 chr2 173377098 173377452 -77310402 - MER39 LTR ERV1 0 707 340 4287 116 8 62 chr2 173378019 173378749 -77309105 - LTR8 LTR ERV1 0 691 1 23143 147 44 48 chr2 173378750 173379884 -77307970 - HUERS-P1 LTR ERV1 -1 6262 5125 2373 113 3 0 chr2 173379884 173380195 -77307659 + AluSp SINE Alu 1 312 -1 23143 147 44 48 chr2 173380195 173383798 -77304056 - HUERS-P1 LTR ERV1 -1138 5125 1510 396 0 0 0 chr2 173383798 173383842 -77304012 + (CA)n Simple_repeat Simple_repeat 2 45 0 204 40 0 0 chr2 173383842 173383867 -77303987 + (GA)n Simple_repeat Simple_repeat 1 25 0 23143 147 44 48 chr2 173383867 173385071 -77302783 - HUERS-P1 LTR ERV1 -4751 1512 1 4356 114 31 66 chr2 173385071 173385787 -77302067 - LTR8 LTR ERV1 0 691 1 594 281 61 8 chr2 173385791 173386037 -77301817 + MIR SINE MIR 2 260 -2 2212 190 98 44 chr2 173386343 173386954 -77300900 - LTR48B LTR ERV1 0 644 1 223 250 0 53 chr2 173387157 173387202 -77300652 - MIR SINE MIR -118 144 103 6803 124 44 54 chr2 173387202 173388147 -77299707 - Tigger3b DNA MER2_type -1797 1231 299 1910 142 10 3 chr2 173388147 173388442 -77299412 - AluSq SINE Alu -16 297 1 6803 124 44 54 chr2 173388442 173388739 -77299115 - Tigger3b DNA MER2_type -2729 299 1 223 250 0 53 chr2 173388739 173388769 -77299085 - MIR SINE MIR -159 103 73 1354 85 45 15 chr2 173389294 173389495 -77298359 - LTR12 LTR ERV1 -23 691 485 404 239 9 0 chr2 173389495 173389604 -77298250 - LTR30 LTR ERV1 -74 648 539 3652 176 76 52 chr2 173389604 173390587 -77297267 - pTR5 LTR ERV1 -418 2020 734 2487 79 0 0 chr2 173390593 173390896 -77296958 + AluSg SINE Alu 1 303 -7 23 0 0 0 chr2 173391224 173391247 -77296607 + AT_rich Low_complexity Low_complexity 1 23 0 202 228 88 0 chr2 173391714 173391771 -77296083 - MIR SINE MIR -12 250 189 501 274 75 122 chr2 173392823 173393291 -77294563 + L2 LINE L2 2827 3272 0 382 205 404 0 chr2 173393474 173393625 -77294229 - MIR SINE MIR -7 255 44 1830 129 25 74 chr2 173393655 173393980 -77293874 - AluJo SINE Alu -3 309 1 2362 92 0 3 chr2 173394560 173394864 -77292990 - AluSg SINE Alu -7 303 1 221 216 0 0 chr2 173394880 173394917 -77292937 + polypurine Low_complexity Low_complexity 1 37 0 459 0 0 0 chr2 173395125 173395176 -77292678 + (TG)n Simple_repeat Simple_repeat 2 52 0 1933 132 40 10 chr2 173399208 173399511 -77288343 + AluJo SINE Alu 1 312 0 2779 124 43 22 chr2 173399570 173400015 -77287839 - LTR32 LTR ERVL -4 467 14 233 285 49 49 chr2 173400482 173400605 -77287249 - MIR3 SINE MIR -4 204 82 361 289 24 42 chr2 173401394 173401560 -77286294 - MER103 DNA DNA 0 166 4 249 260 156 0 chr2 173404616 173404693 -77283161 + MIR SINE MIR 168 256 -6 242 266 0 31 chr2 173404668 173404732 -77283122 - L2 LINE L2 -12 3260 3199 * 1158 180 57 116 chr2 173404802 173405190 -77282664 - MLT1A1 LTR MaLR 0 365 1 261 357 117 45 chr2 173405841 173406149 -77281705 - L2 LINE L2 0 3272 2943 354 330 36 40 chr2 173406594 173406818 -77281036 + L2 LINE L2 1853 2075 -1239 3483 144 66 30 chr2 173407190 173407623 -77280231 - L1MB8 LINE L1 -5 6173 5710 2437 75 3 0 chr2 173407623 173407929 -77279925 - AluSp SINE Alu -6 307 1 3483 144 66 30 chr2 173407929 173408118 -77279736 - L1MB8 LINE L1 -468 5710 5529 309 76 76 0 chr2 173408389 173408468 -77279386 + (TA)n Simple_repeat Simple_repeat 2 86 0 1409 124 5 0 chr2 173408470 173408672 -77279182 - AluSg/x SINE Alu -6 306 104 1657 167 0 55 chr2 173408713 173409042 -77278812 + AluJo SINE Alu 1 311 -1 2203 115 3 0 chr2 173409138 173409434 -77278420 + AluSq SINE Alu 1 297 -16 2404 61 3 3 chr2 173409539 173409836 -77278018 + AluY SINE Alu 1 297 -14 230 0 33 0 chr2 173409839 173409869 -77277985 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 192 77 0 0 chr2 173411554 173411580 -77276274 + (GAGAA)n Simple_repeat Simple_repeat 4 29 0 6023 130 12 10 chr2 173412061 173412967 -77274887 - L1MC1 LINE L1 -3 6330 5423 275 317 0 12 chr2 173413032 173413114 -77274740 - MER63 DNA MER1_type 0 1060 980 * 552 221 29 44 chr2 173413109 173413245 -77274609 - MER63 DNA MER1_type -76 760 1 2309 105 0 6 chr2 173413547 173413861 -77273993 + AluSx SINE Alu 1 312 0 508 115 10 10 chr2 173414705 173414801 -77273053 + (TTCC)n Simple_repeat Simple_repeat 2 97 0 1653 141 16 4 chr2 173415535 173415791 -77272063 + AluJb SINE Alu 38 296 -16 2366 119 0 0 chr2 173415969 173416281 -77271573 - AluSx SINE Alu 0 312 1 339 25 0 0 chr2 173416295 173416335 -77271519 + (CA)n Simple_repeat Simple_repeat 2 41 0 331 177 53 7 chr2 173416341 173416411 -77271443 + (TA)n Simple_repeat Simple_repeat 1 66 -555 2415 104 0 0 chr2 173416411 173416718 -77271136 + AluSx SINE Alu 1 307 -5 331 177 53 7 chr2 173416718 173416935 -77270919 + (TA)n Simple_repeat Simple_repeat 66 621 0 320 180 52 6 chr2 173416949 173417121 -77270733 + (TA)n Simple_repeat Simple_repeat 1 180 0 264 232 0 53 chr2 173417205 173417300 -77270554 + L1MC4 LINE L1 6616 6705 -1337 433 184 18 0 chr2 173417360 173417469 -77270385 + (TA)n Simple_repeat Simple_repeat 1 111 0 1217 126 131 5 chr2 173417512 173417726 -77270128 + MER21A LTR ERV1 24 264 -667 3098 143 49 43 chr2 173417731 173418284 -77269570 + MER21A LTR ERV1 376 931 0 1533 152 82 7 chr2 173418721 173418991 -77268863 + AluJb SINE Alu 2 291 -21 2436 103 47 36 chr2 173419382 173419560 -77268294 + THE1B LTR MaLR 1 176 -188 2273 112 3 0 chr2 173419560 173419864 -77267990 - AluSx SINE Alu -7 305 1 2436 103 47 36 chr2 173419864 173420045 -77267809 + THE1B LTR MaLR 176 364 0 209 198 50 174 chr2 173420088 173420209 -77267645 - MIR3 SINE MIR -14 194 89 2506 15 0 0 chr2 173420785 173421057 -77266797 - AluY SINE Alu -1 310 39 335 320 26 13 chr2 173421194 173421350 -77266504 - MER117 DNA MER1_type -2 195 38 366 310 167 23 chr2 173421539 173421713 -77266141 - MIR SINE MIR -11 251 53 200 289 0 0 chr2 173421974 173422012 -77265842 - L2 LINE L2 -15 3257 3220 293 289 60 66 chr2 173422155 173422321 -77265533 + L3b LINE CR1 1277 1441 -142 297 0 0 0 chr2 173422796 173422829 -77265025 + (CA)n Simple_repeat Simple_repeat 2 34 0 222 62 0 0 chr2 173422831 173422863 -77264991 + (GA)n Simple_repeat Simple_repeat 2 33 0 238 268 0 0 chr2 173423016 173423072 -77264782 - L1MC/D LINE L1 -2035 5773 5718 831 256 93 112 chr2 173423346 173423546 -77264308 + MLT1J LTR MaLR 9 211 -300 2086 118 0 0 chr2 173423546 173423826 -77264028 - AluSg SINE Alu -30 280 1 831 256 93 112 chr2 173423826 173424132 -77263722 + MLT1J LTR MaLR 211 505 -6 537 266 102 0 chr2 173424150 173424278 -77263576 - MIR SINE MIR -109 153 13 1610 171 38 11 chr2 173424568 173424855 -77262999 - AluJo SINE Alu -17 295 1 432 0 0 0 chr2 173424933 173424981 -77262873 + (TG)n Simple_repeat Simple_repeat 2 49 0 654 222 208 10 chr2 173425157 173425364 -77262490 + MIR SINE MIR 15 262 0 456 247 65 43 chr2 173425374 173425535 -77262319 - MIR SINE MIR -50 158 43 1671 199 75 25 chr2 173427111 173427588 -77260266 + MER39 LTR ERV1 1 707 0 2147 136 0 3 chr2 173429113 173429421 -77258433 + AluSx SINE Alu 1 307 -5 2914 120 7 44 chr2 173429983 173430433 -77257421 + Tigger2a DNA MER2_type 2 434 0 1331 203 37 87 chr2 173431209 173431564 -77256290 - MER46C DNA MER2_type -1 337 1 306 160 0 0 chr2 173431850 173431900 -77255954 - MER46C DNA MER2_type -288 50 1 186 319 156 7 chr2 173433140 173433281 -77254573 - L2 LINE L2 -2 3270 3109 215 336 78 26 chr2 173433433 173433549 -77254305 - L2 LINE L2 -17 3255 3134 1535 273 65 31 chr2 173433981 173434457 -77253397 + MLT1J LTR MaLR 10 501 -10 336 345 29 73 chr2 173434568 173434814 -77253040 - L2 LINE L2 -201 3071 2837 281 319 192 11 chr2 173435909 173436185 -77251669 + L2 LINE L2 2067 2392 -922 1118 223 60 32 chr2 173436246 173436529 -77251325 + MLT1E2 LTR MaLR 5 295 -331 215 285 50 76 chr2 173437031 173437333 -77250521 + L2 LINE L2 2557 2850 -464 228 268 37 0 chr2 173437651 173437733 -77250121 + LTR66 LTR ERVL 360 444 -166 883 178 100 17 chr2 173438087 173438221 -77249633 - AluJo SINE Alu -40 272 118 225 0 0 0 chr2 173438221 173438246 -77249608 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 883 178 100 17 chr2 173438246 173438291 -77249563 - AluJo SINE Alu -194 118 78 2349 93 3 7 chr2 173438304 173438614 -77249240 + AluSp SINE Alu 1 309 -4 376 214 84 46 chr2 173438620 173438751 -77249103 + L2 LINE L2 1699 1834 -1480 235 245 0 0 chr2 173438838 173438887 -77248967 + L2 LINE L2 1838 1886 -1428 11383 194 32 66 chr2 173438900 173444520 -77243334 - L1PA16 LINE L1 -1 7603 2203 401 276 13 55 chr2 173445164 173445381 -77242473 - L1PA16 LINE L1 -5268 2306 2086 1127 337 24 40 chr2 173445406 173445999 -77241855 - L1PA16 LINE L1 -6203 1371 789 3592 255 72 32 chr2 173446008 173447399 -77240455 + L2 LINE L2 1857 3313 0 23 0 0 0 chr2 173447469 173447492 -77240362 + AT_rich Low_complexity Low_complexity 1 23 0 1556 196 186 15 chr2 173448117 173448510 -77239344 - MLT1C LTR MaLR -5 462 3 199 256 48 96 chr2 173448580 173448705 -77239149 + MIR SINE MIR 65 183 -79 3647 144 84 13 chr2 173448778 173449495 -77238359 + LTR1B LTR ERV1 1 785 0 350 130 19 0 chr2 173449533 173449587 -77238267 - Charlie7 DNA MER1_type 0 2612 2558 2034 248 75 29 chr2 173449707 173450401 -77237453 - Charlie7 DNA MER1_type -1852 760 35 2136 201 33 41 chr2 173451028 173451511 -77236343 + MLT1D LTR MaLR 27 505 0 2312 173 3 14 chr2 173452006 173452375 -77235479 + MLT1A1 LTR MaLR 1 365 0 1434 157 75 105 chr2 173453132 173453343 -77234511 - MLT1B LTR MaLR 0 390 195 342 0 0 0 chr2 173453343 173453381 -77234473 + (TG)n Simple_repeat Simple_repeat 2 39 0 1434 157 75 105 chr2 173453381 173453570 -77234284 - MLT1B LTR MaLR -195 195 2 326 198 16 157 chr2 173453903 173453969 -77233885 + MER5B DNA MER1_type 75 118 -60 475 75 32 96 chr2 173453969 173454063 -77233791 - L1PA3 LINE L1 0 6155 6068 326 198 16 157 chr2 173454063 173454117 -77233737 + MER5B DNA MER1_type 118 178 0 720 346 74 35 chr2 173454978 173455463 -77232391 - L3 LINE CR1 -1044 533 30 609 288 75 24 chr2 173456246 173456458 -77231396 - MIR SINE MIR -8 254 32 1237 186 155 10 chr2 173456502 173456793 -77231061 + MLT1H LTR MaLR 217 549 0 211 234 0 0 chr2 173458769 173458816 -77229038 + A-rich Low_complexity Low_complexity 1 47 0 192 284 99 25 chr2 173459222 173459303 -77228551 + L2 LINE L2 3149 3235 -37 534 321 71 25 chr2 173459355 173459595 -77228259 + MIR SINE MIR 12 262 0 1367 228 97 35 chr2 173459686 173460120 -77227734 + MLT1C LTR MaLR 7 467 0 222 105 0 0 chr2 173461528 173461566 -77226288 + (GA)n Simple_repeat Simple_repeat 1 38 0 180 0 0 0 chr2 173461888 173461908 -77225946 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 1531 251 121 19 chr2 173464823 173465294 -77222560 - L2 LINE L2 -491 2823 2305 501 145 14 172 chr2 173465299 173465355 -77222499 + MLT1D LTR MaLR 382 445 -60 1428 177 129 39 chr2 173465355 173465689 -77222165 + MLT1A1 LTR MaLR 1 364 -1 501 145 14 172 chr2 173465689 173465713 -77222141 + MLT1D LTR MaLR 445 471 -34 2801 19 0 0 chr2 173465713 173466021 -77221833 - AluYa5 SINE Alu -3 308 1 501 145 14 172 chr2 173466021 173466084 -77221770 + MLT1D LTR MaLR 471 503 -2 253 290 14 0 chr2 173466390 173466459 -77221395 - L3b LINE CR1 -92 1491 1422 195 268 71 0 chr2 173467095 173467151 -77220703 - L2 LINE L2 -8 3305 3246 588 279 43 0 chr2 173467173 173467313 -77220541 - MIR SINE MIR -73 189 44 375 318 37 0 chr2 173467959 173468066 -77219788 + MIR3 SINE MIR 97 207 -1 228 309 37 12 chr2 173468953 173469034 -77218820 + MIR SINE MIR 39 121 -141 373 261 7 43 chr2 173469125 173469263 -77218591 + L1ME4a LINE L1 5987 6119 -2 2231 101 0 41 chr2 173469430 173469748 -77218106 + AluSg SINE Alu 1 305 -5 180 0 0 0 chr2 173470930 173470950 -77216904 + (T)n Simple_repeat Simple_repeat 1 20 0 478 268 7 42 chr2 173471536 173471678 -77216176 - MIR3 SINE MIR -30 178 42 1871 154 0 0 chr2 173472326 173472605 -77215249 + AluJb SINE Alu 1 279 -33 199 205 51 115 chr2 173473918 173473996 -77213858 - MIR3 SINE MIR -28 180 108 300 313 10 40 chr2 173474149 173474248 -77213606 - MIR SINE MIR -147 115 20 697 299 44 16 chr2 173474541 173474792 -77213062 + MIR SINE MIR 5 262 0 209 268 13 6 chr2 173475509 173475594 -77212260 + MIR SINE MIR 105 191 -17 * 470 310 32 21 chr2 173475581 173475768 -77212086 + MIR SINE MIR 62 250 -12 188 343 71 10 chr2 173476355 173476454 -77211400 + MIR SINE MIR 38 142 -66 2186 200 32 26 chr2 173477117 173477581 -77210273 + MLT1C LTR MaLR 1 467 0 834 165 0 8 chr2 173478045 173478172 -77209682 + FLAM_A SINE Alu 1 126 -7 2430 75 3 0 chr2 173479257 173479563 -77208291 - AluY SINE Alu -4 307 1 2372 72 0 10 chr2 173479618 173479935 -77207919 - AluY SINE Alu 0 311 1 389 323 104 79 chr2 173480234 173480252 -77207602 - L2 LINE L2 0 3272 3256 2174 131 0 0 chr2 173480252 173480550 -77207304 - AluSx SINE Alu -14 298 1 389 323 104 79 chr2 173480550 173480974 -77206880 - L2 LINE L2 -16 3256 2819 207 271 57 29 chr2 173481693 173481763 -77206091 - L2 LINE L2 -558 2756 2685 319 278 155 0 chr2 173482132 173482229 -77205625 + MER91A DNA MER1_type 60 171 -25 325 235 82 0 chr2 173482237 173482322 -77205532 + MER91A DNA MER1_type 95 186 -10 1809 183 47 6 chr2 173482645 173482967 -77204887 - MER58B DNA MER1_type 0 341 7 397 255 87 47 chr2 173483426 173483575 -77204279 + MIR SINE MIR 58 212 -50 27 0 0 0 chr2 173485787 173485814 -77202040 + AT_rich Low_complexity Low_complexity 1 27 0 2643 120 67 36 chr2 173486264 173486739 -77201115 + LTR2B LTR ERV1 1 490 0 1912 162 39 19 chr2 173486978 173487391 -77200463 + MER61C LTR ERV1 14 434 0 654 127 24 32 chr2 173487391 173487517 -77200337 + MER61C-int LTR ERV1 1 125 -5092 338 125 0 18 chr2 173487589 173487645 -77200209 + MER61C-int LTR ERV1 345 399 -4818 2287 93 3 0 chr2 173487650 173487950 -77199904 - AluSp SINE Alu -12 301 1 25035 92 29 27 chr2 173487959 173492669 -77195185 + MER61C-int LTR ERV1 467 5114 -103 270 300 40 131 chr2 173493470 173493767 -77194087 - L2 LINE L2 -87 3185 2916 217 176 59 50 chr2 173493923 173494042 -77193812 + (CTATA)n Simple_repeat Simple_repeat 1 120 0 185 365 101 14 chr2 173494057 173494334 -77193520 - L2 LINE L2 -558 2756 2456 355 258 32 11 chr2 173497344 173497437 -77190417 + MIR3 SINE MIR 60 154 -54 521 313 118 12 chr2 173498906 173499229 -77188625 + LTR16A LTR ERVL 88 444 -6 4078 129 39 30 chr2 173502545 173503266 -77184588 - LTR8A LTR ERV1 0 727 1 1525 172 24 54 chr2 173503392 173503689 -77184165 - AluJb SINE Alu -24 288 1 403 113 0 0 chr2 173503981 173504043 -77183811 + MLT2A2 LTR ERVL 1 62 -391 2307 159 74 7 chr2 173504043 173504779 -77183075 - LTR1B LTR ERV1 0 826 1 1529 171 37 41 chr2 173504779 173505268 -77182586 + MLT2A2 LTR ERVL 59 554 0 707 233 126 71 chr2 173505325 173505393 -77182461 + HAL1b LINE L1 414 477 -871 1894 166 3 3 chr2 173505393 173505689 -77182165 - AluJb SINE Alu -14 298 3 707 233 126 71 chr2 173505689 173506002 -77181852 + HAL1b LINE L1 477 816 -532 223 286 18 0 chr2 173506623 173506679 -77181175 - L2 LINE L2 -7 3306 3250 1373 302 120 30 chr2 173506714 173507821 -77180033 + L1MC/D LINE L1 2434 3640 -2506 22110 141 35 13 chr2 173507996 173512385 -77175469 + L1MA3 LINE L1 18 4628 -3096 2073 139 13 0 chr2 173512385 173512687 -77175167 + AluSx SINE Alu 1 306 -6 22110 141 35 13 chr2 173512687 173515854 -77172000 + L1MA3 LINE L1 4628 7724 0 831 306 103 45 chr2 173516353 173516648 -77171206 + L1MC/D LINE L1 4294 4571 -1575 2095 120 3 3 chr2 173516648 173516939 -77170915 - AluSx SINE Alu -21 291 1 831 306 103 45 chr2 173516939 173517005 -77170849 + L1MC/D LINE L1 4571 4632 -1514 2066 129 13 0 chr2 173517005 173517314 -77170540 + AluSq SINE Alu 1 313 0 831 306 103 45 chr2 173517314 173517778 -77170076 + L1MC/D LINE L1 4632 5167 -979 448 277 141 19 chr2 173517905 173518161 -77169693 + L1MC/D LINE L1 5372 5658 -2150 1554 194 47 49 chr2 173518185 173518674 -77169180 + L1MC4a LINE L1 3863 4350 -1796 272 205 93 43 chr2 173518666 173518827 -77169027 + L1MC4a LINE L1 4889 5057 -1089 * 265 253 49 93 chr2 173518811 173519080 -77168774 + L1MC4a LINE L1 5679 5812 -309 * 226 245 0 0 chr2 173519101 173519154 -77168700 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 28 0 0 0 chr2 173519301 173519329 -77168525 + AT_rich Low_complexity Low_complexity 1 28 0 1834 152 81 47 chr2 173520131 173520513 -77167341 - MSTD LTR MaLR 0 396 2 255 231 19 0 chr2 173520586 173520638 -77167216 + L2 LINE L2 3007 3059 -213 716 108 146 8 chr2 173520694 173520824 -77167030 - L1PA8 LINE L1 -9 6163 6016 180 250 66 105 chr2 173520853 173520929 -77166925 + L3b LINE CR1 1511 1583 0 356 40 20 0 chr2 173521327 173521377 -77166477 + (TG)n Simple_repeat Simple_repeat 2 52 0 2294 115 0 0 chr2 173522270 173522575 -77165279 + AluSx SINE Alu 2 306 -6 1364 170 18 0 chr2 173524117 173524340 -77163514 + AluJo SINE Alu 67 293 -19 312 307 45 0 chr2 173524394 173524482 -77163372 + L2 LINE L2 3147 3238 -34 2292 102 0 3 chr2 173524967 173525271 -77162583 + AluSx SINE Alu 1 303 -9 297 0 0 0 chr2 173525609 173525642 -77162212 + (CA)n Simple_repeat Simple_repeat 1 33 0 1705 143 0 26 chr2 173525881 173526153 -77161701 + AluJo SINE Alu 37 301 -11 493 226 148 13 chr2 173526295 173526450 -77161404 - MER5B DNA MER1_type -2 176 1 725 171 118 18 chr2 173526460 173526630 -77161224 - MER5A DNA MER1_type -2 187 1 186 259 90 66 chr2 173526674 173526840 -77161014 - L2 LINE L2 -337 2977 2808 1642 166 40 27 chr2 173527399 173527695 -77160159 + AluJo SINE Alu 1 300 -12 417 130 130 30 chr2 173527981 173528112 -77159742 - L1ME4a LINE L1 -1 6120 5977 305 316 93 5 chr2 173528465 173528658 -77159196 - L1ME4a LINE L1 -322 5799 5590 249 285 114 41 chr2 173529219 173529342 -77158512 + L2 LINE L2 3141 3272 0 692 329 6 0 chr2 173529601 173529771 -77158083 + MER91A DNA MER1_type 3 173 -23 30 27 0 0 chr2 173530450 173530487 -77157367 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 173530762 173530790 -77157064 + AT_rich Low_complexity Low_complexity 1 28 0 2080 174 113 22 chr2 173531092 173531553 -77156301 - MLT1D LTR MaLR 0 505 3 582 289 20 25 chr2 173531598 173531799 -77156055 + MIR SINE MIR 7 206 -56 215 274 288 33 chr2 173532328 173532481 -77155373 + MIR SINE MIR 20 211 -51 211 378 55 31 chr2 173532511 173532638 -77155216 - L2 LINE L2 -6 3266 3137 607 274 112 17 chr2 173532671 173532912 -77154942 - L1ME2 LINE L1 0 6164 5901 496 147 11 32 chr2 173532916 173533011 -77154843 - FRAM SINE Alu -11 165 73 818 164 46 76 chr2 173533011 173533273 -77154581 - L1ME2 LINE L1 -287 5877 5624 399 217 11 33 chr2 173533704 173533796 -77154058 + L2 LINE L2 3182 3271 -1 317 333 9 9 chr2 173534620 173534728 -77153126 - MLT1K LTR MaLR -384 204 97 2263 109 3 6 chr2 173534813 173535124 -77152730 + AluSx SINE Alu 1 310 -2 321 208 0 0 chr2 173535747 173535819 -77152035 + (TA)n Simple_repeat Simple_repeat 1 72 0 539 237 17 0 chr2 173536021 173536139 -77151715 - MER5B DNA MER1_type 0 178 59 322 252 90 36 chr2 173536529 173536640 -77151214 + MIR SINE MIR 16 132 -76 301 314 55 68 chr2 173536637 173536956 -77150898 - L2 LINE L2 -219 3053 2736 * 2107 137 7 0 chr2 173536975 173537275 -77150579 + AluSx SINE Alu 1 302 -10 201 178 22 0 chr2 173537414 173537459 -77150395 + MIR SINE MIR 99 144 -64 180 0 0 0 chr2 173537514 173537534 -77150320 + (T)n Simple_repeat Simple_repeat 1 20 0 842 274 148 28 chr2 173537536 173537995 -77149859 - MLT1K LTR MaLR -64 524 11 240 35 0 0 chr2 173538195 173538224 -77149630 + (CA)n Simple_repeat Simple_repeat 2 30 0 254 283 92 0 chr2 173538404 173538524 -77149330 + L3b LINE CR1 1115 1245 -338 272 346 15 8 chr2 173539189 173539319 -77148535 - L2 LINE L2 -4 3309 3179 2290 104 3 0 chr2 173539369 173539667 -77148187 + AluSq SINE Alu 1 299 -14 705 256 118 5 chr2 173540061 173540272 -77147582 - MIR SINE MIR -24 238 4 318 217 183 50 chr2 173540583 173540703 -77147151 + MIR SINE MIR 20 155 -107 302 243 189 0 chr2 173540879 173540990 -77146864 - MIR SINE MIR -31 231 100 248 302 0 0 chr2 173542709 173542772 -77145082 - L2 LINE L2 -4 3268 3206 213 250 0 0 chr2 173543382 173543430 -77144424 - MER5A DNA MER1_type -138 51 4 243 274 0 0 chr2 173543500 173543562 -77144292 - MIR SINE MIR 0 262 201 405 0 0 0 chr2 173543712 173543757 -77144097 + (CA)n Simple_repeat Simple_repeat 2 46 0 1708 139 133 10 chr2 173543758 173543963 -77143891 - MER7A DNA MER2_type -2693 345 90 1837 157 3 13 chr2 173543963 173544269 -77143585 - AluJb SINE Alu -9 303 1 1708 139 133 10 chr2 173544269 173544372 -77143482 - MER7A DNA MER2_type -2948 90 1 632 154 0 70 chr2 173544385 173544411 -77143443 - L1MB5 LINE L1 -9 6165 6139 2207 91 0 10 chr2 173544411 173544708 -77143146 - AluY SINE Alu -17 294 1 632 154 0 70 chr2 173544708 173544824 -77143030 - L1MB5 LINE L1 -35 6139 6033 1608 172 3 0 chr2 173594824 173595114 -77092740 + AluSg SINE Alu 20 310 0 225 0 0 0 chr2 173595115 173595140 -77092714 + (TA)n Simple_repeat Simple_repeat 1 25 0 298 179 9 0 chr2 173595233 173595288 -77092566 + AluSp SINE Alu 136 181 -122 1354 168 7 74 chr2 173595289 173595564 -77092290 + AluJo SINE Alu 23 315 3 224 89 0 22 chr2 173595564 173595609 -77092245 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 724 144 36 36 chr2 173595609 173595748 -77092106 + L1PA16 LINE L1 6028 6166 0 1354 168 7 74 chr2 173595748 173595768 -77092086 + AluJo SINE Alu 279 299 -13 995 147 6 6 chr2 173596151 173596307 -77091547 - AluJb SINE Alu -156 156 1 745 169 0 29 chr2 173596962 173597098 -77090756 + FLAM_C SINE Alu 1 132 -1 2419 171 10 40 chr2 173597850 173598352 -77089502 - L1MB5 LINE L1 -15 6159 5673 320 203 0 0 chr2 173598353 173598412 -77089442 + AluSq/x SINE Alu 46 104 -199 328 325 123 44 chr2 173598675 173599083 -77088771 - L1M4 LINE L1 -1092 5054 4581 2239 116 0 0 chr2 173599083 173599375 -77088479 - AluSx SINE Alu -20 292 1 328 325 123 44 chr2 173599375 173599576 -77088278 - L1M4 LINE L1 -1565 4581 4397 26 30 0 0 chr2 173599779 173599812 -77088042 + AT_rich Low_complexity Low_complexity 1 33 0 187 318 59 24 chr2 173600282 173600367 -77087487 - L2 LINE L2 -787 2527 2440 280 149 0 0 chr2 173600506 173600553 -77087301 + MADE1 DNA Mariner 34 80 0 751 312 137 15 chr2 173600572 173601040 -77086814 - L2 LINE L2 -922 2392 1868 231 244 0 0 chr2 173601285 173601330 -77086524 + L2 LINE L2 3263 3307 -6 726 156 23 31 chr2 173601594 173601722 -77086132 - FLAM_C SINE Alu -16 127 1 226 265 60 0 chr2 173602057 173602140 -77085714 + L1M LINE L1 5319 5406 -885 6397 179 22 11 chr2 173602480 173604723 -77083131 + L1MC1 LINE L1 4061 6320 -13 23 33 0 0 chr2 173605043 173605073 -77082781 + AT_rich Low_complexity Low_complexity 1 30 0 663 305 41 24 chr2 173605221 173605467 -77082387 + MIR SINE MIR 3 252 -10 1846 200 51 47 chr2 173605823 173606312 -77081542 + L1MC4 LINE L1 7246 7736 -306 236 167 21 0 chr2 173606346 173606394 -77081460 - L1 LINE L1 -1201 4945 4897 406 282 76 15 chr2 173606505 173606636 -77081218 + MER5A DNA MER1_type 49 187 -2 506 211 79 0 chr2 173607557 173607671 -77080183 + MIR SINE MIR 54 176 -86 241 260 0 0 chr2 173609440 173609490 -77078364 - MER5A DNA MER1_type -3 186 137 425 264 94 47 chr2 173609583 173609795 -77078059 - L3b LINE CR1 -117 1466 1245 238 361 21 0 chr2 173609776 173609873 -77077981 - MIR3 SINE MIR -3 205 107 * 550 149 214 7 chr2 173610112 173610266 -77077588 - MER53 DNA DNA -3 186 1 807 306 77 25 chr2 173610321 173610674 -77077180 + L2 LINE L2 2889 3259 -54 1372 199 16 32 chr2 173610690 173611001 -77076853 - MLT1F LTR MaLR 0 542 237 475 135 0 0 chr2 173611038 173611112 -77076742 + FLAM SINE Alu 49 122 -21 333 118 0 0 chr2 173611113 173611164 -77076690 + (CA)n Simple_repeat Simple_repeat 2 52 0 316 257 0 14 chr2 173611170 173611240 -77076614 - MLT1F LTR MaLR -404 138 70 764 211 14 0 chr2 173611245 173611392 -77076462 - MLT1E1 LTR MaLR -1 653 505 5035 234 133 36 chr2 173611408 173612922 -77074932 + L1MDa LINE L1 2484 4263 -2277 3155 83 43 0 chr2 173612922 173613365 -77074489 + L1PA10 LINE L1 5707 6168 0 5035 234 133 36 chr2 173613365 173613944 -77073910 + L1MDa LINE L1 4263 4784 -1756 291 191 79 0 chr2 173614029 173614092 -77073762 + L1ME3A LINE L1 5927 5994 -176 22 35 0 0 chr2 173614474 173614503 -77073351 + AT_rich Low_complexity Low_complexity 1 29 0 342 293 68 20 chr2 173615029 173615176 -77072678 - L1ME LINE L1 -435 5735 5582 262 246 59 19 chr2 173615199 173615338 -77072516 - L1P5 LINE L1 -702 5452 5306 481 273 16 0 chr2 173615525 173615646 -77072208 - MIR SINE MIR -62 200 78 235 0 0 0 chr2 173615704 173615734 -77072120 + L1MA1 LINE L1 6269 6298 -4 263 269 64 64 chr2 173615973 173616114 -77071740 + L2 LINE L2 3155 3295 -18 2073 103 41 0 chr2 173616496 173616787 -77071067 - AluSp SINE Alu -10 303 1 613 135 99 35 chr2 173617128 173617269 -77070585 - L1MD3 LINE L1 -10 7985 7836 342 202 78 62 chr2 173617256 173617385 -77070469 - L1MD2 LINE L1 -203 6156 6026 * 48 18 0 0 chr2 173617560 173617615 -77070239 + AT_rich Low_complexity Low_complexity 1 55 0 26 50 0 0 chr2 173618337 173618377 -77069477 + AT_rich Low_complexity Low_complexity 1 40 0 2043 126 0 0 chr2 173618508 173618779 -77069075 + AluSx SINE Alu 3 273 -39 222 37 0 0 chr2 173618794 173618821 -77069033 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 980 278 129 11 chr2 173619956 173620320 -77067534 - MLT1I LTR MaLR -2 407 1 309 306 153 16 chr2 173620320 173620570 -77067284 - L1 LINE L1 -1101 5045 4762 488 221 21 35 chr2 173620584 173620729 -77067125 - L1PA16 LINE L1 0 6166 6024 590 252 14 20 chr2 173620766 173620913 -77066941 - FRAM SINE Alu -27 149 4 946 119 0 0 chr2 173621099 173621225 -77066629 + AluSg/x SINE Alu 150 275 -37 2329 105 0 0 chr2 173621394 173621698 -77066156 + AluSx SINE Alu 1 304 -8 225 108 0 0 chr2 173621711 173621748 -77066106 + (A)n Simple_repeat Simple_repeat 1 37 0 352 276 35 83 chr2 173621939 173622120 -77065734 + L1ME LINE L1 4911 5074 -1072 341 58 0 0 chr2 173622120 173622172 -77065682 - L1MA3 LINE L1 0 6305 6254 352 276 35 83 chr2 173622172 173622280 -77065574 + L1ME LINE L1 5074 5186 -960 329 296 91 67 chr2 173622344 173622794 -77065060 + L1ME LINE L1 5308 5768 -394 1101 179 17 98 chr2 173622822 173623056 -77064798 - Tigger7 DNA MER2_type -2272 215 1 266 319 81 56 chr2 173623418 173623578 -77064276 + L2 LINE L2 2626 2789 -525 25 0 0 0 chr2 173623946 173623971 -77063883 + AT_rich Low_complexity Low_complexity 1 25 0 2155 118 0 0 chr2 173624776 173625064 -77062790 + AluSx SINE Alu 7 294 -18 294 305 43 35 chr2 173625706 173625847 -77062007 + L1MC/D LINE L1 5598 5739 -2069 190 264 55 66 chr2 173626519 173626610 -77061244 + L2 LINE L2 3119 3208 -64 2005 155 7 0 chr2 173627722 173628088 -77059766 + AluJo SINE Alu 1 368 0 247 254 0 0 chr2 173628328 173628383 -77059471 + GA-rich Low_complexity Low_complexity 3 57 0 467 214 0 20 chr2 173628466 173628564 -77059290 + MER2 DNA MER2_type 3 98 -247 1940 140 7 10 chr2 173629119 173629426 -77058428 + AluJb SINE Alu 1 306 -6 394 294 50 25 chr2 173629517 173629677 -77058177 - MIR3 SINE MIR 0 208 45 745 142 0 0 chr2 173630313 173630433 -77057421 + AluSg/x SINE Alu 193 312 0 1540 152 3 87 chr2 173631089 173631399 -77056455 - AluJo SINE Alu -13 299 16 192 299 91 0 chr2 173631529 173631606 -77056248 + MIR SINE MIR 40 123 -85 852 203 54 45 chr2 173631792 173631847 -77056007 + AluJb SINE Alu 87 140 -172 2209 97 0 7 chr2 173631847 173632145 -77055709 + AluSg SINE Alu 1 296 -14 852 203 54 45 chr2 173632145 173632311 -77055543 + AluJb SINE Alu 140 310 -2 234 255 39 0 chr2 173632337 173632388 -77055466 + MIR SINE MIR 198 250 -12 219 333 73 41 chr2 173632481 173632604 -77055250 - MIR SINE MIR -133 129 3 * 432 308 149 55 chr2 173632604 173632801 -77055053 + L2 LINE L2 2401 2639 -675 3099 149 40 20 chr2 173632801 173633352 -77054502 - MER68 LTR ERV1 0 562 1 432 308 149 55 chr2 173633352 173633421 -77054433 + L2 LINE L2 2639 2700 -614 3852 141 42 22 chr2 173633429 173634151 -77053703 - L1MA9 LINE L1 -4 6308 5573 309 300 25 40 chr2 173634358 173634609 -77053245 - L2 LINE L2 -1009 2305 1997 2186 112 3 6 chr2 173634784 173635096 -77052758 + AluSq SINE Alu 1 311 -2 2072 152 27 6 chr2 173635216 173635552 -77052302 - MER2 DNA MER2_type 0 344 2 498 144 10 62 chr2 173636872 173636969 -77050885 - Tigger7 DNA MER2_type -1 2586 2495 2299 131 29 79 chr2 173636969 173637412 -77050442 + Tigger2a DNA MER2_type 14 434 0 524 80 280 0 chr2 173637412 173637534 -77050320 - Tigger7 DNA MER2_type -102 2385 2229 1357 159 9 4 chr2 173637529 173637750 -77050104 - Tigger7 DNA MER2_type -1918 569 348 2118 218 66 2 chr2 173637750 173638205 -77049649 - MER72 LTR ERV1 0 722 239 260 83 0 0 chr2 173638401 173638437 -77049417 - MER72 LTR ERV1 -685 37 2 2174 176 0 6 chr2 173638437 173638790 -77049064 - Tigger7 DNA MER2_type -199 351 1 1435 121 22 81 chr2 173639199 173639471 -77048383 + AluJo SINE Alu 46 301 -11 1959 206 104 65 chr2 173639575 173640199 -77047655 + L1MC5 LINE L1 6926 7595 -366 2136 110 17 3 chr2 173640199 173640499 -77047355 + AluSg SINE Alu 1 304 -6 1959 206 104 65 chr2 173640499 173640752 -77047102 + L1MC5 LINE L1 7595 7837 -124 1999 136 43 54 chr2 173641068 173641436 -77046418 + THE1B LTR MaLR 1 364 0 269 310 49 35 chr2 173641559 173641701 -77046153 + MLT1J LTR MaLR 177 320 -191 333 219 8 73 chr2 173641735 173641858 -77045996 + MLT1J LTR MaLR 395 509 -2 317 265 34 86 chr2 173642720 173642837 -77045017 + L2 LINE L2 3161 3271 -1 381 122 40 10 chr2 173643665 173643752 -77044102 + L1M3 LINE L1 5589 5677 -497 979 412 0 50 chr2 173643755 173644073 -77043781 - AluJb SINE Alu 0 302 1 599 223 0 0 chr2 173644083 173644213 -77043641 - FLAM_A SINE Alu -3 139 10 291 186 0 0 chr2 173644214 173644257 -77043597 - AluSp SINE Alu -125 178 136 26 0 0 0 chr2 173644350 173644376 -77043478 + AT_rich Low_complexity Low_complexity 1 26 0 2291 104 3 0 chr2 173644376 173644685 -77043169 - AluSg SINE Alu 0 310 1 369 280 140 0 chr2 173644690 173644897 -77042957 - L1M4 LINE L1 -1483 4663 4428 21 89 0 0 chr2 173644936 173644992 -77042862 + AT_rich Low_complexity Low_complexity 1 56 0 263 235 41 31 chr2 173645153 173645251 -77042603 - L1M4 LINE L1 -2053 4093 3995 335 193 114 43 chr2 173645285 173645425 -77042429 - L1MEc LINE L1 -3901 2677 2490 395 228 132 48 chr2 173645895 173646062 -77041792 - MIR SINE MIR -36 226 46 3761 171 85 24 chr2 173646179 173647172 -77040682 - L1MB7 LINE L1 -16 6168 5106 3276 128 23 17 chr2 173647172 173647695 -77040159 - MER1A DNA MER1_type -1 526 1 3761 171 85 24 chr2 173647695 173647748 -77040106 - L1MB7 LINE L1 -1078 5106 5058 762 317 86 21 chr2 173647944 173648597 -77039257 - L1MEc LINE L1 -4614 2107 1413 276 259 53 43 chr2 173649043 173649320 -77038534 - HAL1b LINE L1 -814 534 219 1842 253 76 10 chr2 173649334 173649973 -77037881 - L1MD1 LINE L1 0 7803 6097 1665 207 121 66 chr2 173649985 173650483 -77037371 + MLT1F LTR MaLR 18 542 0 333 267 120 22 chr2 173650896 173651121 -77036733 + MLT1L LTR MaLR 369 615 0 409 345 172 19 chr2 173651321 173651785 -77036069 + L2 LINE L2 1848 2382 -932 524 180 174 118 chr2 173651961 173652046 -77035808 + MER58A DNA MER1_type 37 116 -2304 243 0 0 0 chr2 173652046 173652073 -77035781 + (TG)n Simple_repeat Simple_repeat 2 28 0 524 180 174 118 chr2 173652073 173652165 -77035689 + MER58A DNA MER1_type 116 224 0 520 366 86 31 chr2 173652281 173652702 -77035152 + L2 LINE L2 2807 3250 -22 460 349 96 7 chr2 173652743 173653015 -77034839 + L2 LINE L2 2538 2833 -481 460 352 102 42 chr2 173653023 173653407 -77034447 + L2 LINE L2 2866 3272 0 212 355 83 37 chr2 173653465 173653899 -77033955 + L2 LINE L2 971 1424 -1890 22 0 0 0 chr2 173657215 173657237 -77030617 + AT_rich Low_complexity Low_complexity 1 22 0 668 130 28 0 chr2 173657607 173657715 -77030139 - AluSq SINE Alu -78 235 125 2328 84 0 13 chr2 173657715 173658025 -77029829 - AluY SINE Alu 0 311 6 1738 128 26 33 chr2 173658032 173658336 -77029518 - AluJo SINE Alu -10 302 1 23 0 0 0 chr2 173658703 173658726 -77029128 + AT_rich Low_complexity Low_complexity 1 23 0 320 293 28 100 chr2 173660393 173660847 -77027007 + HERVL LTR ERVL 4341 4794 -860 2184 116 0 0 chr2 173661363 173661648 -77026206 + AluSx SINE Alu 1 285 -27 315 323 158 12 chr2 173664308 173664562 -77023292 - L2 LINE L2 0 3313 3023 5895 29 0 0 chr2 173666666 173667352 -77020502 - L1PA3 LINE L1 -3 6152 5467 288 284 326 0 chr2 173667360 173667455 -77020399 + L2 LINE L2 3133 3258 -14 801 220 149 10 chr2 173667626 173668396 -77019458 - L1ME1 LINE L1 -5 6161 5221 633 206 0 0 chr2 173668393 173668519 -77019335 - L1MB7 LINE L1 -20 6164 6039 * 2152 204 57 14 chr2 173668516 173669095 -77018759 - L1ME1 LINE L1 -1753 4393 3790 534 121 12 0 chr2 173669095 173669178 -77018676 + L1MA9 LINE L1 5692 5775 -537 25 31 0 0 chr2 173669231 173669263 -77018591 + AT_rich Low_complexity Low_complexity 1 32 0 1051 149 60 25 chr2 173669263 173669464 -77018390 - MER2 DNA MER2_type -137 208 1 2574 102 87 23 chr2 173669464 173669946 -77017908 + L1MA9 LINE L1 5786 6298 -14 3076 214 89 78 chr2 173669978 173670513 -77017341 - L1ME1 LINE L1 -2339 3807 3279 237 29 29 0 chr2 173670513 173670547 -77017307 + MER76 LTR ERV 654 688 0 3076 214 89 78 chr2 173670547 173670766 -77017088 - L1ME1 LINE L1 -2867 3279 3064 2183 112 3 7 chr2 173670766 173671060 -77016794 - AluSg SINE Alu -17 293 1 3076 214 89 78 chr2 173671060 173671179 -77016675 - L1ME1 LINE L1 -3082 3064 2948 1982 127 13 3 chr2 173671179 173671478 -77016376 + AluSq SINE Alu 1 302 -11 3076 214 89 78 chr2 173671478 173671946 -77015908 - L1ME1 LINE L1 -3198 2948 2416 730 269 30 63 chr2 173672075 173672254 -77015600 + MIR SINE MIR 1 184 -78 252 0 0 0 chr2 173672254 173672282 -77015572 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2322 57 7 0 chr2 173672285 173672564 -77015290 - AluY SINE Alu -30 281 1 730 269 30 63 chr2 173672564 173672651 -77015203 + MIR SINE MIR 186 262 0 331 327 33 20 chr2 173673127 173673277 -77014577 + L1M4 LINE L1 4258 4409 -1737 763 230 46 17 chr2 173673656 173673895 -77013959 - L1 LINE L1 -1580 4566 4321 1225 50 13 0 chr2 173673895 173674054 -77013800 - L1PA4 LINE L1 -2 6153 5993 4419 150 81 62 chr2 173674056 173675103 -77012751 + L1MC3 LINE L1 6719 7785 0 26 64 0 0 chr2 173675355 173675402 -77012452 + AT_rich Low_complexity Low_complexity 1 47 0 28 48 0 0 chr2 173675626 173675668 -77012186 + AT_rich Low_complexity Low_complexity 1 42 0 534 264 75 95 chr2 173676040 173676389 -77011465 - MLT1H LTR MaLR 0 549 208 864 185 35 114 chr2 173676428 173676527 -77011327 - MLT1H LTR MaLR -305 244 139 2112 128 0 16 chr2 173676527 173676832 -77011022 - AluSx SINE Alu -8 304 5 864 185 35 114 chr2 173676832 173676986 -77010868 - MLT1H LTR MaLR -410 139 11 644 228 42 11 chr2 173677623 173677812 -77010042 - L1ME3A LINE L1 -98 6072 5878 2369 93 0 6 chr2 173678494 173678805 -77009049 - AluSq SINE Alu -4 309 1 207 0 0 0 chr2 173678922 173678945 -77008909 + (TTTTTG)n Simple_repeat Simple_repeat 4 26 0 183 279 47 23 chr2 173679192 173679278 -77008576 + MIR SINE MIR 53 140 -68 2214 109 3 16 chr2 173680381 173680694 -77007160 + AluSx SINE Alu 1 309 -3 40 21 0 0 chr2 173680833 173680880 -77006974 + AT_rich Low_complexity Low_complexity 1 47 0 352 226 216 0 chr2 173681517 173681619 -77006235 - L2 LINE L2 0 3313 3190 1767 167 37 10 chr2 173681797 173682096 -77005758 + AluJo SINE Alu 2 308 -4 694 216 121 74 chr2 173682309 173683375 -77004479 - L1MC5 LINE L1 -86 7875 6638 418 217 184 8 chr2 173683863 173683991 -77003863 + L1M4c LINE L1 2071 2175 -4209 297 0 0 0 chr2 173683991 173684024 -77003830 + (CA)n Simple_repeat Simple_repeat 2 34 0 418 217 184 8 chr2 173684024 173684139 -77003715 + L1M4c LINE L1 2175 2357 -4027 355 76 0 3 chr2 173684261 173684318 -77003536 + THE1B LTR MaLR 284 400 -28 286 266 112 35 chr2 173684593 173684762 -77003092 + MIR SINE MIR 71 252 -10 724 200 126 4 chr2 173684935 173685165 -77002689 - MIR SINE MIR -3 259 2 2701 150 126 10 chr2 173685888 173686380 -77001474 + MER44D DNA MER2_type 1 604 -1 31 82 0 0 chr2 173687586 173687659 -77000195 + AT_rich Low_complexity Low_complexity 1 73 0 345 259 190 9 chr2 173687739 173687955 -76999899 + L1MC4 LINE L1 7788 8042 0 376 303 130 62 chr2 173688892 173689215 -76998639 + HAL1 LINE L1 837 1181 -1326 710 195 128 12 chr2 173689215 173689379 -76998475 - MLT1F LTR MaLR -13 529 347 569 143 64 71 chr2 173689381 173689521 -76998333 + FLAM_C SINE Alu 3 141 -2 1088 192 164 41 chr2 173689534 173689851 -76998003 - MLT1F LTR MaLR -181 361 6 799 291 55 24 chr2 173689885 173690266 -76997588 + HAL1 LINE L1 1299 1691 -816 724 214 0 0 chr2 173690272 173690403 -76997451 + FLAM_A SINE Alu 2 132 -1 30 0 0 0 chr2 173690659 173690689 -76997165 + AT_rich Low_complexity Low_complexity 1 30 0 311 266 126 35 chr2 173690980 173691123 -76996731 + HAL1b LINE L1 749 904 -444 307 319 13 51 chr2 173691128 173691285 -76996569 + HAL1b LINE L1 756 906 -442 1620 138 41 38 chr2 173691307 173691496 -76996358 - MER46B DNA MER2_type -2495 236 169 2041 90 56 7 chr2 173691496 173691784 -76996070 - AluSx SINE Alu -10 302 1 1620 138 41 38 chr2 173691784 173691884 -76995970 - MER46B DNA MER2_type -2562 169 71 307 106 0 0 chr2 173691884 173691931 -76995923 + L1 LINE L1 3357 3403 -2743 948 279 15 38 chr2 173691931 173692196 -76995658 + MLT2B3 LTR ERVL 288 546 -8 429 165 12 0 chr2 173692206 173692291 -76995563 + L1M2a LINE L1 2026 2111 -5057 418 145 0 188 chr2 173692296 173692413 -76995441 - MER46B DNA MER2_type -266 95 1 3269 54 0 0 chr2 173694032 173694438 -76993416 - L1PA5 LINE L1 -4 6150 5745 610 267 68 38 chr2 173695065 173695301 -76992553 + MARNA DNA Mariner 101 343 -243 37 76 0 0 chr2 173695422 173695501 -76992353 + AT_rich Low_complexity Low_complexity 1 79 0 201 39 0 0 chr2 173695523 173695549 -76992305 + (GA)n Simple_repeat Simple_repeat 2 27 0 1339 235 75 49 chr2 173695551 173695941 -76991913 + L1MC4 LINE L1 6492 6870 -1172 2275 117 0 0 chr2 173695941 173696241 -76991613 - AluSx SINE Alu -12 300 1 1339 235 75 49 chr2 173696241 173696880 -76990974 + L1MC4 LINE L1 6870 7706 -336 2340 93 3 0 chr2 173696880 173697182 -76990672 + AluSg SINE Alu 1 303 -7 1695 159 11 7 chr2 173697210 173697487 -76990367 + AluJb SINE Alu 1 278 -34 512 331 144 32 chr2 173697711 173698435 -76989419 + L2 LINE L2 1872 2676 -638 204 333 18 0 chr2 173698615 173698672 -76989182 + L2 LINE L2 3121 3178 -94 25 0 0 0 chr2 173699700 173699725 -76988129 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr2 173700919 173700951 -76986903 + AT_rich Low_complexity Low_complexity 1 32 0 26 74 0 0 chr2 173701073 173701127 -76986727 + AT_rich Low_complexity Low_complexity 1 54 0 22 35 0 0 chr2 173701813 173701842 -76986012 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 173703697 173703719 -76984135 + AT_rich Low_complexity Low_complexity 1 22 0 31 44 0 0 chr2 173704002 173704047 -76983807 + AT_rich Low_complexity Low_complexity 1 45 0 271 232 0 29 chr2 173704104 173704173 -76983681 + MIR SINE MIR 186 252 -10 229 283 145 53 chr2 173704784 173704936 -76982918 + MIR SINE MIR 4 169 -93 281 268 49 0 chr2 173705011 173705093 -76982761 + MIR SINE MIR 168 253 -9 191 240 248 24 chr2 173705148 173705273 -76982581 - MIR3 SINE MIR -26 182 30 358 284 23 68 chr2 173705812 173705988 -76981866 + MIR SINE MIR 92 259 -3 2176 80 4 0 chr2 173706524 173706798 -76981056 - AluSg SINE Alu -35 275 1 476 271 36 0 chr2 173707945 173708085 -76979769 + L1MEd LINE L1 25 169 -5950 480 250 8 16 chr2 173708110 173708234 -76979620 + L1MEd LINE L1 251 373 -5746 1448 135 46 23 chr2 173708325 173708572 -76979282 - Tigger7 DNA MER2_type 0 2487 2235 1437 175 58 21 chr2 173708572 173708898 -76978956 + MER44D DNA MER2_type 2 609 0 * 2680 190 4 15 chr2 173708898 173709358 -76978496 - MER44D DNA MER2_type -250 455 1 247 298 122 30 chr2 173709358 173709882 -76977972 + L1MEd LINE L1 2446 3017 -3112 960 125 30 12 chr2 173709900 173710068 -76977786 + L1MA4 LINE L1 6094 6264 -36 28 48 0 0 chr2 173710105 173710147 -76977707 + AT_rich Low_complexity Low_complexity 1 42 0 1951 151 7 3 chr2 173710254 173710552 -76977302 + AluJb SINE Alu 1 299 -13 2276 76 3 30 chr2 173710552 173710855 -76976999 + AluY SINE Alu 1 295 -16 1024 205 47 77 chr2 173711235 173711556 -76976298 + L1M4 LINE L1 4934 5229 -922 1431 189 47 14 chr2 173711556 173711853 -76976001 + AluJb SINE Alu 3 309 -3 1024 205 47 77 chr2 173711853 173711956 -76975898 + L1M4 LINE L1 5229 5334 -817 269 192 27 55 chr2 173711951 173712024 -76975830 + HAL1 LINE L1 283 353 -2154 * 750 264 140 58 chr2 173712148 173712446 -76975408 + HAL1 LINE L1 573 919 -1588 7179 37 17 0 chr2 173712446 173713597 -76974257 + L1PA5 LINE L1 4993 6158 0 750 264 140 58 chr2 173713597 173713725 -76974129 + HAL1 LINE L1 919 1035 -1472 2375 93 3 0 chr2 173713756 173714066 -76973788 + AluSp SINE Alu 1 311 -2 1762 185 0 10 chr2 173714648 173714951 -76972903 + AluJo SINE Alu 3 302 -10 299 282 0 0 chr2 173715346 173715417 -76972437 - L2 LINE L2 -1 3271 3201 386 155 0 6 chr2 173715564 173715634 -76972220 + Alu SINE Alu 1 55 -247 296 297 51 22 chr2 173715941 173716079 -76971775 - L2 LINE L2 0 3313 3172 258 32 0 0 chr2 173716207 173716238 -76971616 + (TTG)n Simple_repeat Simple_repeat 1 31 0 606 234 0 0 chr2 173717552 173717676 -76970178 + FLAM_A SINE Alu 1 124 -9 2283 103 0 0 chr2 173717737 173718038 -76969816 + AluSx SINE Alu 1 301 -11 252 204 0 0 chr2 173718168 173718212 -76969642 - MER113 DNA MER1_type? -14 507 464 22 35 0 0 chr2 173718233 173718262 -76969592 + AT_rich Low_complexity Low_complexity 1 29 0 2599 56 0 0 chr2 173718741 173719045 -76968809 - AluY SINE Alu -7 304 1 1827 168 7 0 chr2 173719431 173719734 -76968120 + AluJo SINE Alu 1 305 -7 380 324 6 55 chr2 173719838 173720020 -76967834 - MER5A DNA MER1_type -16 173 1 2195 98 3 10 chr2 173720527 173720823 -76967031 - AluSq SINE Alu -19 294 1 21 89 0 0 chr2 173722614 173722670 -76965184 + AT_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr2 173723301 173723329 -76964525 + AT_rich Low_complexity Low_complexity 1 28 0 1880 130 39 23 chr2 173723503 173723810 -76964044 - AluSx SINE Alu 0 312 1 1876 222 90 23 chr2 173723810 173724323 -76963531 + MER74B LTR ERVL 66 612 -10 2312 94 0 7 chr2 173725066 173725364 -76962490 - AluSc SINE Alu -13 296 1 336 307 24 47 chr2 173725567 173725694 -76962160 - MIR SINE MIR -60 148 25 193 333 53 40 chr2 173726367 173726442 -76961412 + L2 LINE L2 3148 3223 -49 686 312 20 0 chr2 173726588 173726787 -76961067 - MIR SINE MIR -10 252 50 2046 150 11 11 chr2 173727321 173727681 -76960173 + L1MB2 LINE L1 5810 6169 -2 465 215 190 65 chr2 173727785 173727809 -76960045 + MIR SINE MIR 8 28 -234 1780 165 7 13 chr2 173727809 173728112 -76959742 - AluJb SINE Alu -11 301 1 465 215 190 65 chr2 173728112 173728132 -76959722 + MIR SINE MIR 28 44 -218 2025 114 4 0 chr2 173728132 173728404 -76959450 - AluSx SINE Alu -36 276 4 465 215 190 65 chr2 173728404 173728558 -76959296 + MIR SINE MIR 44 232 -30 566 345 140 17 chr2 173728719 173729183 -76958671 + L2 LINE L2 2138 2658 -656 7399 32 9 0 chr2 173729643 173730714 -76957140 - L1PA4 LINE L1 -7 6148 5081 543 300 163 58 chr2 173730991 173731304 -76956550 + L2 LINE L2 2924 3269 -3 864 136 8 0 chr2 173731494 173731626 -76956228 + FLAM_C SINE Alu 1 133 0 26 50 0 0 chr2 173731791 173731831 -76956023 + AT_rich Low_complexity Low_complexity 1 40 0 237 253 81 46 chr2 173731833 173731929 -76955925 - MIR SINE MIR -100 108 10 240 372 6 0 chr2 173731954 173732086 -76955768 + MIR SINE MIR 29 160 -59 2165 128 0 3 chr2 173732115 173732420 -76955434 + AluSq SINE Alu 3 306 -7 1787 220 230 22 chr2 173733800 173734580 -76953274 + L1MC4 LINE L1 6453 7069 -739 2198 112 0 7 chr2 173734580 173734876 -76952978 + AluSx SINE Alu 1 294 -18 1787 220 230 22 chr2 173734876 173735170 -76952684 + L1MC4 LINE L1 7069 7713 -95 225 0 0 0 chr2 173735242 173735267 -76952587 + (CA)n Simple_repeat Simple_repeat 2 26 0 30 77 0 0 chr2 173736068 173736133 -76951721 + AT_rich Low_complexity Low_complexity 1 65 0 765 171 55 0 chr2 173736370 173736534 -76951320 + L1MB4 LINE L1 6008 6180 0 4288 169 45 11 chr2 173736755 173737032 -76950822 + L1MB7 LINE L1 5297 5563 -621 1622 190 10 17 chr2 173737032 173737332 -76950522 + AluJo SINE Alu 1 298 -14 4288 169 45 11 chr2 173737332 173737891 -76949963 + L1MB7 LINE L1 5563 6162 -22 273 327 0 10 chr2 173738377 173738476 -76949378 + L1ME LINE L1 5508 5605 -516 528 239 16 87 chr2 173738597 173738781 -76949073 + MIR SINE MIR 72 242 -20 301 79 0 0 chr2 173738947 173738985 -76948869 - tRNA-Lys-AAA tRNA tRNA -37 39 2 411 284 175 24 chr2 173739240 173739451 -76948403 + MIR SINE MIR 1 243 -19 187 296 0 0 chr2 173739683 173739727 -76948127 + L2 LINE L2 2665 2708 -606 1184 285 114 59 chr2 173739811 173740295 -76947559 + L2 LINE L2 2086 2627 -687 2057 124 12 67 chr2 173740295 173740697 -76947157 - L1MA7 LINE L1 0 6291 5912 1184 285 114 59 chr2 173740697 173740969 -76946885 + L2 LINE L2 2627 2883 -431 2447 57 10 10 chr2 173740992 173741293 -76946561 + AluY SINE Alu 1 301 -10 225 373 13 13 chr2 173741542 173741617 -76946237 + L2 LINE L2 3162 3236 -36 326 318 30 3 chr2 173741820 173741937 -76945917 + MER5B DNA MER1_type 51 181 -8 221 373 60 40 chr2 173741965 173742086 -76945768 - L2 LINE L2 -351 2963 2846 1697 116 30 26 chr2 173742086 173742354 -76945500 + AluSx SINE Alu 44 312 0 221 373 60 40 chr2 173742354 173742581 -76945273 - L2 LINE L2 -468 2846 2608 1498 123 9 0 chr2 173742866 173743086 -76944768 + AluSc SINE Alu 87 308 -1 28 29 0 0 chr2 173743542 173743577 -76944277 + AT_rich Low_complexity Low_complexity 1 35 0 905 147 0 0 chr2 173744440 173744576 -76943278 + AluJo SINE Alu 1 136 -176 383 304 125 24 chr2 173745078 173745246 -76942608 + MIR SINE MIR 30 214 -48 762 169 0 8 chr2 173746251 173746375 -76941479 - FLAM_A SINE Alu -10 123 1 765 181 7 0 chr2 173746970 173747125 -76940729 + L1PA3 LINE L1 5999 6154 -1 658 207 57 0 chr2 173747164 173747304 -76940550 + L1MC3 LINE L1 6992 7139 -646 6845 182 45 18 chr2 173747306 173748787 -76939067 - L1MC3 LINE L1 -743 5403 5182 6268 182 50 0 chr2 173748781 173749902 -76937952 + L1MA4 LINE L1 853 2029 -5139 * 2093 228 25 62 chr2 173749902 173750467 -76937387 + MLT2B3 LTR ERVL 3 546 -8 9791 199 43 49 chr2 173750489 173751835 -76936019 + L1MA4 LINE L1 2038 3391 -3776 198 0 0 0 chr2 173751835 173751857 -76935997 + (TA)n Simple_repeat Simple_repeat 2 23 0 9791 199 43 49 chr2 173751857 173751929 -76935925 + L1MA4 LINE L1 3391 3462 -3705 523 185 0 137 chr2 173751929 173752075 -76935779 - FLAM_A SINE Alu -6 127 2 9791 199 43 49 chr2 173752075 173752554 -76935300 + L1MA4 LINE L1 3462 3942 -3225 1732 159 42 0 chr2 173752554 173752843 -76935011 - AluJb SINE Alu -11 301 1 9791 199 43 49 chr2 173752843 173754224 -76933630 + L1MA4 LINE L1 3942 5356 -1811 * 14712 35 1 1 chr2 173754219 173756012 -76931842 - L1PA3 LINE L1 -1398 4748 2955 7646 21 4 2 chr2 173756012 173757417 -76930437 + L1PA3 LINE L1 4749 6155 0 5334 157 35 22 chr2 173757417 173757895 -76929959 + L1MA4 LINE L1 5342 5813 -1508 2275 90 0 7 chr2 173757895 173758196 -76929658 + AluY SINE Alu 1 299 -12 5334 157 35 22 chr2 173758196 173759663 -76928191 + L1MA4 LINE L1 5813 7310 -11 384 196 103 0 chr2 173759686 173759793 -76928061 + L1MC4a LINE L1 5814 5931 -1877 31 58 0 0 chr2 173759824 173759876 -76927978 + AT_rich Low_complexity Low_complexity 1 52 0 24 0 0 0 chr2 173760313 173760337 -76927517 + AT_rich Low_complexity Low_complexity 1 24 0 1152 222 77 94 chr2 173760958 173761566 -76926288 - L1MC5 LINE L1 -726 7235 6638 3038 220 149 37 chr2 173762054 173762182 -76925672 + L1M4c LINE L1 2071 2183 -4199 297 0 0 0 chr2 173762182 173762215 -76925639 + (CA)n Simple_repeat Simple_repeat 2 34 0 3038 220 149 37 chr2 173762215 173763060 -76924794 + L1M4c LINE L1 2183 2932 -3450 2295 94 0 0 chr2 173763060 173763348 -76924506 - AluY SINE Alu -23 288 1 3038 220 149 37 chr2 173763348 173764020 -76923834 + L1M4c LINE L1 2932 4028 -2354 254 275 0 0 chr2 173764152 173764221 -76923633 - L1MC4 LINE L1 -170 7872 7804 1922 164 0 0 chr2 173764241 173764527 -76923327 - AluSx SINE Alu -26 286 1 247 288 85 8 chr2 173764527 173764645 -76923209 - L1MC4 LINE L1 -224 7818 7692 556 134 17 67 chr2 173764651 173764770 -76923084 - L1MA7 LINE L1 -7 6284 6172 921 270 80 24 chr2 173764827 173765164 -76922690 - L1MC4 LINE L1 -335 7707 7352 730 256 147 11 chr2 173765252 173765537 -76922317 - L1MC4 LINE L1 -1015 7027 6704 4581 161 19 43 chr2 173766170 173767056 -76920798 + MER6 DNA MER2_type 1 865 0 459 277 92 7 chr2 173767710 173767851 -76920003 + MIR3 SINE MIR 15 167 -41 2298 90 0 26 chr2 173768152 173768462 -76919392 - AluSc SINE Alu -7 302 1 1439 206 168 79 chr2 173768624 173769491 -76918363 - MER52A LTR ERV1 -3 1752 666 237 274 226 24 chr2 173770287 173770455 -76917399 + MIR SINE MIR 20 221 -41 21 0 0 0 chr2 173770952 173770973 -76916881 + AT_rich Low_complexity Low_complexity 1 21 0 2428 75 3 22 chr2 173771305 173771624 -76916230 + AluSp SINE Alu 1 313 0 490 342 128 42 chr2 173771758 173772399 -76915455 - L2 LINE L2 -631 2683 1988 2276 94 0 52 chr2 173773077 173773405 -76914449 + AluSx SINE Alu 1 311 -1 644 161 0 0 chr2 173774308 173774420 -76913434 - FRAM SINE Alu -3 173 62 324 358 117 28 chr2 173774506 173774858 -76912996 + L2 LINE L2 2469 2851 -463 443 341 36 0 chr2 173774929 173775067 -76912787 - L2 LINE L2 -4 3268 3126 2388 71 3 0 chr2 173775106 173775403 -76912451 - AluY SINE Alu -13 298 1 260 400 84 16 chr2 173775444 173775634 -76912220 - L2 LINE L2 -460 2854 2652 2273 119 0 3 chr2 173776092 173776403 -76911451 + AluSq SINE Alu 1 310 -3 2369 82 0 3 chr2 173776406 173776709 -76911145 + AluY SINE Alu 1 302 -9 344 327 243 16 chr2 173776722 173777513 -76910341 - L2 LINE L2 -2004 1310 341 183 355 73 36 chr2 173777556 173777666 -76910188 + L2 LINE L2 2939 3052 -220 285 263 0 0 chr2 173777758 173777815 -76910039 + L2 LINE L2 3208 3264 -8 1217 93 0 0 chr2 173778939 173779090 -76908764 + AluSq/x SINE Alu 1 151 -161 1647 153 0 0 chr2 173779090 173779338 -76908516 + AluSx SINE Alu 46 293 -19 186 43 0 0 chr2 173779375 173779398 -76908456 + (TG)n Simple_repeat Simple_repeat 2 24 0 32 26 0 0 chr2 173780453 173780492 -76907362 + AT_rich Low_complexity Low_complexity 1 39 0 264 219 61 49 chr2 173781189 173781271 -76906583 - MIR SINE MIR -85 123 41 1654 187 6 32 chr2 173782346 173782662 -76905192 + AluJb SINE Alu 1 308 -4 206 326 0 0 chr2 173783874 173783923 -76903931 - L2 LINE L2 -87 3185 3137 266 292 158 3 chr2 173784154 173784251 -76903603 - MIR SINE MIR -90 118 10 692 203 16 0 chr2 173784787 173784910 -76902944 + FLAM_A SINE Alu 1 125 -8 28 0 0 0 chr2 173785134 173785162 -76902692 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr2 173785808 173785832 -76902022 + (T)n Simple_repeat Simple_repeat 1 24 0 516 16 0 0 chr2 173788986 173789047 -76898807 + (CA)n Simple_repeat Simple_repeat 2 62 0 500 287 80 0 chr2 173789353 173789503 -76898351 - MIR SINE MIR -67 195 34 197 0 0 67 chr2 173789698 173789728 -76898126 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 1541 191 3 10 chr2 173790865 173791158 -76896696 + AluJo SINE Alu 1 291 -21 268 167 19 0 chr2 173791247 173791301 -76896553 - FAM SINE Alu -10 169 115 1792 158 3 18 chr2 173791259 173791543 -76896311 - AluJo SINE Alu -30 282 3 327 244 39 0 chr2 173791933 173792011 -76895843 + MIR3 SINE MIR 85 165 -43 296 308 100 15 chr2 173792341 173792471 -76895383 - L3 LINE CR1 -1 1576 1436 2080 124 16 11 chr2 173792729 173793093 -76894761 - MLT1A1 LTR MaLR -2 426 1 28 29 0 0 chr2 173794156 173794191 -76893663 + AT_rich Low_complexity Low_complexity 1 35 0 828 181 0 0 chr2 173794602 173794735 -76893119 - FLAM_A SINE Alu 0 133 1 1306 114 0 0 chr2 173794875 173795051 -76892803 - AluSg/x SINE Alu -14 296 121 2484 64 0 0 chr2 173795636 173795932 -76891922 - AluY SINE Alu -15 296 1 556 298 95 29 chr2 173796338 173796580 -76891274 - MIR SINE MIR 0 262 5 645 197 100 80 chr2 173797045 173797294 -76890560 - L1MC4 LINE L1 0 8042 7789 2284 171 91 17 chr2 173797299 173797773 -76890081 + LTR22 LTR ERVK 1 509 0 49920 76 9 4 chr2 173797773 173804577 -76883277 + HERVK22 LTR ERVK 1 6837 0 2283 188 55 16 chr2 173804577 173805067 -76882787 + LTR22 LTR ERVK 1 509 0 325 182 0 0 chr2 173805159 173805225 -76882629 - L1MC4 LINE L1 -371 7671 7606 432 176 33 11 chr2 173805294 173805385 -76882469 - U6 snRNA snRNA -14 93 1 397 246 121 80 chr2 173805410 173805674 -76882180 - L1MC4a LINE L1 -357 7451 7177 681 142 0 0 chr2 173806629 173806742 -76881112 + (TCCA)n Simple_repeat Simple_repeat 4 116 0 269 213 24 150 chr2 173806752 173806879 -76880975 - L2 LINE L2 0 3313 3203 180 106 21 43 chr2 173809265 173809312 -76878542 + (TG)n Simple_repeat Simple_repeat 1 46 0 295 254 30 60 chr2 173809498 173809632 -76878222 - MIR SINE MIR 0 262 133 667 266 91 0 chr2 173809918 173810117 -76877737 - MIR SINE MIR -15 247 31 491 157 43 0 chr2 173810139 173810254 -76877600 - MER69 DNA AcHobo -46 2480 2361 1426 290 47 32 chr2 173810255 173810786 -76877068 + L1MEc LINE L1 35 573 -5823 271 304 36 54 chr2 173811251 173811363 -76876491 + MIR SINE MIR 38 147 -61 720 294 55 33 chr2 173812386 173812645 -76875209 + MIR SINE MIR 1 262 0 1976 139 10 17 chr2 173812645 173812947 -76874907 + AluSx SINE Alu 1 300 -12 225 192 0 0 chr2 173812961 173813013 -76874841 - L1MC4 LINE L1 -1339 6703 6652 234 181 191 48 chr2 173813230 173813335 -76874519 + L1ME4a LINE L1 5712 5831 -290 232 273 101 45 chr2 173813336 173813534 -76874320 + L1ME4a LINE L1 5902 6110 -11 247 267 17 8 chr2 173813580 173813700 -76874154 + (TAA)n Simple_repeat Simple_repeat 1 121 0 21 0 0 0 chr2 173813976 173813997 -76873857 + AT_rich Low_complexity Low_complexity 1 21 0 1924 137 35 0 chr2 173814147 173814431 -76873423 - AluSx SINE Alu -18 294 1 22 70 0 0 chr2 173815428 173815471 -76872383 + AT_rich Low_complexity Low_complexity 1 43 0 1281 150 22 26 chr2 173816097 173816323 -76871531 - AluJo SINE Alu -1 311 87 1651 171 7 27 chr2 173816586 173816885 -76870969 + AluJb SINE Alu 1 293 -19 300 293 75 57 chr2 173817399 173817505 -76870349 - MIR3 SINE MIR -40 168 61 21 95 0 0 chr2 173817810 173817873 -76869981 + AT_rich Low_complexity Low_complexity 1 63 0 33 73 0 0 chr2 173817921 173817989 -76869865 + AT_rich Low_complexity Low_complexity 1 68 0 1117 261 8 12 chr2 173818215 173818472 -76869382 + MIR SINE MIR 2 257 -5 201 121 0 0 chr2 173819321 173819354 -76868500 + (TG)n Simple_repeat Simple_repeat 2 34 0 849 194 6 6 chr2 173819464 173819644 -76868210 - L1PA13 LINE L1 -141 6022 5843 2231 124 3 0 chr2 173819892 173820199 -76867655 - AluSx SINE Alu -4 308 1 319 91 73 0 chr2 173820330 173820385 -76867469 - Alu SINE Alu -2 300 242 309 214 10 61 chr2 173820391 173820489 -76867365 - L1MC4 LINE L1 -1346 6696 6604 651 176 27 9 chr2 173820489 173820722 -76867132 + (TA)n Simple_repeat Simple_repeat 1 237 0 1807 169 37 7 chr2 173821117 173821412 -76866442 - AluJo SINE Alu -4 308 5 350 226 216 0 chr2 173821594 173821696 -76866158 + L2 LINE L2 3190 3313 0 40 21 0 0 chr2 173822333 173822380 -76865474 + AT_rich Low_complexity Low_complexity 1 47 0 2134 92 55 3 chr2 173822519 173822811 -76865043 - AluSg SINE Alu -3 307 1 931 80 72 8 chr2 173822811 173822936 -76864918 - AluSc SINE Alu -175 134 2 1926 117 0 0 chr2 173823052 173823318 -76864536 + AluY SINE Alu 45 310 -1 340 322 86 89 chr2 173824075 173824423 -76863431 - L2 LINE L2 -31 3241 2895 1485 219 53 49 chr2 173824973 173825462 -76862392 + L1MC4 LINE L1 7246 7736 -306 290 228 24 12 chr2 173825491 173825617 -76862237 - L1M4 LINE L1 -1197 4949 4823 312 269 90 48 chr2 173825619 173825786 -76862068 - L1MC4 LINE L1 -1826 5982 5809 3712 107 21 4 chr2 173825801 173826361 -76861493 + L1PA16 LINE L1 5588 6157 -9 480 311 109 4 chr2 173826370 173826637 -76861217 + L1M4 LINE L1 4992 5286 -860 835 218 120 60 chr2 173826647 173826913 -76860941 + AluJo SINE Alu 1 282 -30 360 282 110 66 chr2 173826990 173827263 -76860591 + L1MC4a LINE L1 6069 6353 -1455 1539 224 57 51 chr2 173827355 173828104 -76859750 + L1MC4 LINE L1 6493 7217 -744 21 0 0 0 chr2 173829283 173829304 -76858550 + AT_rich Low_complexity Low_complexity 1 21 0 318 207 126 54 chr2 173829869 173829980 -76857874 - MIR SINE MIR -25 237 119 194 283 43 0 chr2 173830481 173830527 -76857327 - MIR SINE MIR -58 150 103 273 251 108 38 chr2 173831300 173831412 -76856442 + MIR SINE MIR 27 150 -97 22 0 0 0 chr2 173831529 173831551 -76856303 + AT_rich Low_complexity Low_complexity 1 22 0 340 322 86 89 chr2 173832404 173832752 -76855102 + L2 LINE L2 2895 3241 -31 1926 117 0 0 chr2 173833509 173833775 -76854079 - AluY SINE Alu -1 310 45 2060 99 31 24 chr2 173833891 173834016 -76853838 + AluSg SINE Alu 2 125 -185 2038 97 56 0 chr2 173834016 173834314 -76853540 + AluSg SINE Alu 1 313 0 2060 99 31 24 chr2 173834314 173834480 -76853374 + AluSg SINE Alu 125 296 -14 828 181 0 0 chr2 173834620 173834753 -76853101 + FLAM_A SINE Alu 1 133 0 28 29 0 0 chr2 173835165 173835200 -76852654 + AT_rich Low_complexity Low_complexity 1 35 0 2080 124 16 11 chr2 173836263 173836627 -76851227 + MLT1A1 LTR MaLR 1 426 -2 296 308 100 15 chr2 173836885 173837015 -76850839 + L3 LINE CR1 1436 1576 -1 327 244 39 0 chr2 173837345 173837423 -76850431 - MIR3 SINE MIR -43 165 85 849 171 0 0 chr2 173837813 173837936 -76849918 + FLAM_C SINE Alu 3 125 -18 237 272 29 52 chr2 173838018 173838154 -76849700 + MARNA DNA Mariner 322 454 -132 21 36 0 0 chr2 173838870 173838898 -76848956 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 173839305 173839330 -76848524 + AT_rich Low_complexity Low_complexity 1 25 0 2042 92 0 0 chr2 173839335 173839586 -76848268 - AluSc SINE Alu -20 289 39 511 313 140 31 chr2 173839630 173840138 -76847716 + L2 LINE L2 1872 2434 -880 2615 40 0 0 chr2 173840284 173840581 -76847273 - AluY SINE Alu -14 297 1 2181 93 0 4 chr2 173840581 173840860 -76846994 - AluSq SINE Alu -35 278 1 23 0 0 0 chr2 173841029 173841052 -76846802 + AT_rich Low_complexity Low_complexity 1 23 0 6405 59 20 3 chr2 173841087 173841973 -76845881 - L1PA7 LINE L1 0 6154 5254 6693 55 16 0 chr2 173841089 173842146 -76845708 - L1PA7 LINE L1 0 6154 5081 476 252 16 8 chr2 173842448 173842571 -76845283 - MER94 DNA DNA -9 125 2 298 261 52 43 chr2 173842576 173842691 -76845163 + L2 LINE L2 1901 2016 -1298 21 0 0 0 chr2 173842883 173842904 -76844950 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 173843195 173843230 -76844624 + AT_rich Low_complexity Low_complexity 1 35 0 402 285 148 81 chr2 173843491 173844011 -76843843 + L2 LINE L2 2252 2806 -508 417 316 75 90 chr2 173844076 173844194 -76843660 + L2 LINE L2 2943 3061 -211 2224 105 3 3 chr2 173844194 173844490 -76843364 - AluSx SINE Alu -16 296 1 417 316 75 90 chr2 173844490 173844706 -76843148 + L2 LINE L2 3061 3272 0 243 0 0 0 chr2 173845217 173845244 -76842610 + (TG)n Simple_repeat Simple_repeat 2 28 0 25 31 0 0 chr2 173846170 173846202 -76841652 + AT_rich Low_complexity Low_complexity 1 32 0 543 69 0 0 chr2 173846245 173846317 -76841537 + (TA)n Simple_repeat Simple_repeat 2 73 0 233 269 97 0 chr2 173847568 173847661 -76840193 - L2 LINE L2 -260 3012 2911 607 293 142 0 chr2 173847744 173847997 -76839857 + L1ME LINE L1 5507 5795 -326 2116 104 13 19 chr2 173848423 173848698 -76839156 + AluSx SINE Alu 6 280 -32 423 0 0 0 chr2 173848698 173848745 -76839109 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2116 104 13 19 chr2 173848745 173848778 -76839076 + AluSx SINE Alu 280 312 0 2419 87 3 0 chr2 173848780 173849091 -76838763 + AluSp SINE Alu 2 313 0 210 329 43 0 chr2 173849823 173849893 -76837961 + L3 LINE CR1 492 564 -1013 366 311 97 65 chr2 173849895 173850216 -76837638 + L3 LINE CR1 697 1027 -550 757 262 151 4 chr2 173850323 173850602 -76837252 + L3 LINE CR1 1254 1573 -4 2246 95 3 0 chr2 173850681 173850977 -76836877 - AluSg SINE Alu -13 297 1 2032 143 13 0 chr2 173851247 173851555 -76836299 - AluSx SINE Alu 0 312 1 2266 76 24 0 chr2 173852407 173852698 -76835156 + AluY SINE Alu 1 298 -13 2144 122 3 0 chr2 173852722 173853016 -76834838 + AluSx SINE Alu 1 295 -17 970 290 74 44 chr2 173853294 173853821 -76834033 + MLT1H1 LTR MaLR 1 543 -12 431 322 38 38 chr2 173853850 173854033 -76833821 + MIR3 SINE MIR 19 201 -7 2086 141 10 0 chr2 173854091 173854395 -76833459 - AluSx SINE Alu -5 307 1 409 86 54 0 chr2 173854451 173854544 -76833310 + (TA)n Simple_repeat Simple_repeat 1 98 0 325 230 0 80 chr2 173854544 173854644 -76833210 + L1MC4 LINE L1 6612 6703 -1339 303 221 70 12 chr2 173854693 173854779 -76833075 + L1MC4 LINE L1 6613 6703 -1339 180 137 59 0 chr2 173854782 173854833 -76833021 + (TA)n Simple_repeat Simple_repeat 1 54 0 2157 92 3 24 chr2 173856177 173856470 -76831384 + AluSx SINE Alu 1 287 -25 351 0 0 0 chr2 173856470 173856509 -76831345 + (CAATA)n Simple_repeat Simple_repeat 2 40 0 567 307 35 35 chr2 173856510 173856662 -76831192 + MIR3 SINE MIR 6 160 -48 2519 47 10 0 chr2 173856662 173856959 -76830895 + AluY SINE Alu 2 301 -10 567 307 35 35 chr2 173856959 173857008 -76830846 + MIR3 SINE MIR 159 207 -1 1087 169 6 0 chr2 173857533 173857710 -76830144 + AluY SINE Alu 121 298 -13 2239 105 3 3 chr2 173858572 173858867 -76828987 + AluSq SINE Alu 1 295 -18 1690 154 11 32 chr2 173859366 173859651 -76828203 - AluJo SINE Alu -33 279 1 22 56 0 0 chr2 173859866 173859902 -76827952 + AT_rich Low_complexity Low_complexity 1 36 0 1738 109 98 18 chr2 173861281 173861557 -76826297 - AluSx SINE Alu -14 298 1 1108 165 213 24 chr2 173861611 173861865 -76825989 - AluJo SINE Alu 0 302 1 2269 117 0 0 chr2 173862087 173862396 -76825458 + AluSx SINE Alu 1 309 -3 553 281 153 52 chr2 173862407 173862612 -76825242 + L1ME LINE L1 4578 4761 -1418 810 144 0 8 chr2 173862612 173862737 -76825117 + FLAM_C SINE Alu 1 124 -9 553 281 153 52 chr2 173862737 173863301 -76824553 + L1ME LINE L1 4761 5429 -750 2201 121 0 7 chr2 173863518 173863824 -76824030 + AluSx SINE Alu 2 305 -7 422 282 40 0 chr2 173863893 173864067 -76823787 + L1MC5 LINE L1 7262 7442 -519 351 246 66 75 chr2 173864348 173864421 -76823433 + L1MC5 LINE L1 7631 7703 -258 1592 136 115 49 chr2 173864421 173864707 -76823147 + AluSx SINE Alu 1 305 -7 351 246 66 75 chr2 173864707 173864861 -76822993 + L1MC5 LINE L1 7703 7856 -105 291 301 110 10 chr2 173865435 173865644 -76822210 + L1ME LINE L1 5562 5791 -330 2318 114 3 0 chr2 173866380 173866686 -76821168 + AluSx SINE Alu 3 309 -3 329 71 0 36 chr2 173866762 173866818 -76821036 - Alu SINE Alu 0 300 247 2217 105 3 6 chr2 173866860 173867173 -76820681 - AluSx SINE Alu 0 312 1 489 179 0 0 chr2 173867775 173867853 -76820001 + FLAM SINE Alu 48 125 -18 21 36 0 0 chr2 173867855 173867883 -76819971 + AT_rich Low_complexity Low_complexity 1 28 0 2056 120 0 27 chr2 173867945 173868104 -76819750 - AluSx SINE Alu -20 292 143 2560 57 0 13 chr2 173868104 173868419 -76819435 - AluY SINE Alu 0 311 1 2056 120 0 27 chr2 173868419 173868559 -76819295 - AluSx SINE Alu -169 143 1 358 267 219 7 chr2 173868626 173868772 -76819082 - L2 LINE L2 -14 3299 3123 1292 179 14 14 chr2 173868779 173869002 -76818852 + AluJb SINE Alu 85 307 -5 380 252 0 61 chr2 173869037 173869152 -76818702 - L2 LINE L2 -238 3075 2968 351 200 83 48 chr2 173869653 173869798 -76818056 - L1ME3A LINE L1 -5 6165 6016 438 280 155 16 chr2 173870328 173870521 -76817333 + L1MC/D LINE L1 4561 4780 -1366 28 48 0 0 chr2 173870816 173870858 -76816996 + AT_rich Low_complexity Low_complexity 1 42 0 343 309 62 53 chr2 173870983 173871226 -76816628 + L1MC/D LINE L1 4803 5047 -1099 2453 81 3 0 chr2 173871404 173871713 -76816141 - AluSg SINE Alu 0 310 1 1793 163 51 43 chr2 173871777 173872332 -76815522 + MLT2A2 LTR ERVL 1 554 0 266 167 128 0 chr2 173872369 173872447 -76815407 + L1MC/D LINE L1 5351 5438 -2370 247 235 0 0 chr2 173872485 173872536 -76815318 + L1MC/D LINE L1 50 100 -6296 * 1284 282 84 49 chr2 173872534 173873024 -76814830 + L1MC/D LINE L1 531 1003 -5212 2067 102 0 14 chr2 173873024 173873344 -76814510 + AluSc SINE Alu 1 316 0 1284 282 84 49 chr2 173873344 173873670 -76814184 + L1MC/D LINE L1 1003 1316 -4899 2145 90 52 3 chr2 173873670 173873959 -76813895 + AluY SINE Alu 1 303 -8 1284 282 84 49 chr2 173873959 173874141 -76813713 + L1MC/D LINE L1 1316 1372 -4843 1987 143 0 3 chr2 173874141 173874460 -76813394 + AluSx SINE Alu 1 318 0 1284 282 84 49 chr2 173874460 173874559 -76813295 + L1MC/D LINE L1 1372 1466 -4749 284 204 0 0 chr2 173874565 173874614 -76813240 + AluSp SINE Alu 142 190 -113 289 217 98 0 chr2 173874642 173874734 -76813120 + L1MC/D LINE L1 1624 1724 -4672 1219 242 11 0 chr2 173874734 173875018 -76812836 + MLT1F1 LTR MaLR 233 561 -6 892 189 11 23 chr2 173875128 173875303 -76812551 + AluJb SINE Alu 129 301 -11 2167 115 0 32 chr2 173875315 173875627 -76812227 + AluSq SINE Alu 1 302 -11 313 214 19 88 chr2 173875627 173875674 -76812180 + L1MC/D LINE L1 2827 2876 -3339 2060 123 30 10 chr2 173875674 173875976 -76811878 + AluSx SINE Alu 1 308 -4 313 214 19 88 chr2 173875976 173876087 -76811767 + L1MC/D LINE L1 2876 2974 -3241 319 226 34 167 chr2 173876088 173876186 -76811668 + L1MC/D LINE L1 5494 5545 -2332 9796 55 6 102 chr2 173876186 173877694 -76810160 + SVA Other Other 21 1383 -3 319 226 34 167 chr2 173877694 173877829 -76810025 + L1MC/D LINE L1 5545 5696 -2181 2091 63 11 0 chr2 173878849 173879117 -76808737 - L1PA8 LINE L1 -5 6167 5897 2006 155 3 0 chr2 173879293 173879654 -76808200 + AluSx SINE Alu 1 362 0 2057 129 3 25 chr2 173880164 173880481 -76807373 - AluSx SINE Alu -2 310 1 779 214 93 0 chr2 173880492 173880674 -76807180 - MER58A DNA MER1_type -23 201 3 210 271 14 29 chr2 173880863 173880933 -76806921 + MIR3 SINE MIR 128 196 -12 1996 92 96 0 chr2 173881187 173881458 -76806396 - AluSc SINE Alu -12 297 1 1892 173 0 13 chr2 173881621 173881922 -76805932 + AluJb SINE Alu 9 305 -7 268 280 0 0 chr2 173881923 173882016 -76805838 + L1MEc LINE L1 2212 2304 -4092 1505 134 13 53 chr2 173882070 173882184 -76805670 + LTR36 LTR ERV1 1 118 -493 2445 61 0 0 chr2 173882184 173882479 -76805375 - AluY SINE Alu -16 295 1 1505 134 13 53 chr2 173882479 173882563 -76805291 + LTR36 LTR ERV1 118 186 -425 1937 166 0 0 chr2 173882563 173882870 -76804984 + AluJo SINE Alu 1 307 -5 1505 134 13 53 chr2 173882870 173882969 -76804885 + LTR36 LTR ERV1 186 287 -324 * 1626 199 36 34 chr2 173882942 173883359 -76804495 + LTR36 LTR ERV1 189 606 -5 817 150 0 23 chr2 173883457 173883590 -76804264 + FLAM_C SINE Alu 1 130 -3 4124 77 48 10 chr2 173883603 173884191 -76803663 + LTR66 LTR ERVL 1 610 0 1129 118 25 12 chr2 173884191 173884352 -76803502 + AluSq SINE Alu 142 304 -9 23 33 0 0 chr2 173884527 173884557 -76803297 + AT_rich Low_complexity Low_complexity 1 30 0 1382 274 41 35 chr2 173884833 173885370 -76802484 + L1MEc LINE L1 92 631 -5765 * 1990 223 72 54 chr2 173885368 173885927 -76801927 + L1MEc LINE L1 1731 2279 -3936 414 0 0 0 chr2 173885927 173885973 -76801881 + (CA)n Simple_repeat Simple_repeat 1 46 0 1990 223 72 54 chr2 173885973 173886015 -76801839 + L1MEc LINE L1 2279 2319 -3896 1690 197 0 17 chr2 173886015 173886310 -76801544 + AluJb SINE Alu 1 290 -22 1990 223 72 54 chr2 173886310 173886325 -76801529 + L1MEc LINE L1 2319 2332 -3883 2405 87 0 0 chr2 173886325 173886623 -76801231 - AluSg SINE Alu -12 298 1 1990 223 72 54 chr2 173886623 173887167 -76800687 + L1MEc LINE L1 2332 2890 -3325 1999 160 6 6 chr2 173887169 173887521 -76800333 + AluSx SINE Alu 1 352 0 348 24 0 0 chr2 173887519 173887560 -76800294 + (CGA)n Simple_repeat Simple_repeat 2 42 0 1269 206 9 9 chr2 173888117 173888433 -76799421 + MER33 DNA MER1_type 9 324 0 296 242 40 20 chr2 173888445 173888544 -76799310 + Charlie7 DNA MER1_type 5 105 -2507 271 238 37 43 chr2 173888532 173888696 -76799158 + Charlie7 DNA MER1_type 2435 2597 -15 * 460 248 8 31 chr2 173889982 173890111 -76797743 - MER67C LTR ERV1 -301 409 284 1476 209 67 14 chr2 173890112 173890470 -76797384 - MSTA LTR MaLR 0 428 52 1130 56 0 7 chr2 173890655 173890823 -76797031 + AluY SINE Alu 138 304 0 950 169 11 11 chr2 173890824 173891001 -76796853 - MSTB LTR MaLR -249 177 1 772 123 46 0 chr2 173891003 173891133 -76796721 - MLT1A1 LTR MaLR -229 136 1 467 246 123 40 chr2 173891185 173891437 -76796417 + MLT1J LTR MaLR 239 511 0 1626 113 84 35 chr2 173891507 173891818 -76796036 + MER4B LTR ERV1 9 334 -276 405 291 118 8 chr2 173891930 173892167 -76795687 + L1ME LINE L1 5548 5810 -311 199 342 13 26 chr2 173892502 173892578 -76795276 - MIR SINE MIR -187 75 1 683 86 0 0 chr2 173895322 173895415 -76792439 - AluY SINE Alu -217 94 2 284 247 11 45 chr2 173896425 173896514 -76791340 - MIR3 SINE MIR -13 195 110 1256 178 0 48 chr2 173896832 173897062 -76790792 - AluJo SINE Alu -92 220 2 1402 132 5 0 chr2 173897071 173897283 -76790571 - AluSq SINE Alu -10 303 91 1990 191 66 34 chr2 173897286 173897508 -76790346 - L1M4 LINE L1 -1009 5137 4924 1922 144 16 23 chr2 173897508 173897814 -76790040 - AluJb SINE Alu -8 304 1 1990 191 66 34 chr2 173897814 173898093 -76789761 - L1M4 LINE L1 -1222 4924 4620 324 195 61 12 chr2 173898113 173898195 -76789659 - L1ME4a LINE L1 -52 6069 5984 272 298 21 0 chr2 173898311 173898405 -76789449 - MER5A DNA MER1_type -51 138 43 292 259 187 22 chr2 173898809 173898948 -76788906 + MIR SINE MIR 84 245 -17 195 162 0 0 chr2 173898988 173899025 -76788829 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 212 300 171 35 chr2 173899438 173899695 -76788159 - L2 LINE L2 -86 3186 2895 486 228 14 62 chr2 173900037 173900151 -76787703 + MLT1A1 LTR MaLR 186 293 -72 2580 52 3 0 chr2 173900151 173900459 -76787395 - AluY SINE Alu -2 309 1 486 228 14 62 chr2 173900459 173900489 -76787365 + MLT1A1 LTR MaLR 293 323 -42 539 103 23 0 chr2 173900506 173900593 -76787261 + (TCCCC)n Simple_repeat Simple_repeat 4 92 0 2259 96 0 7 chr2 173900593 173900885 -76786969 - AluSx SINE Alu -22 290 1 235 81 27 0 chr2 173901089 173901126 -76786728 - L2 LINE L2 -5 3308 3271 1472 118 41 0 chr2 173901408 173901629 -76786225 - MER30 DNA MER1_type 0 230 1 2106 110 38 0 chr2 173901906 173902198 -76785656 + AluSq SINE Alu 1 303 -10 181 340 9 19 chr2 173902268 173902374 -76785480 - L2 LINE L2 -666 2648 2544 2102 102 0 11 chr2 173902562 173902870 -76784984 - AluSc SINE Alu 0 305 1 522 278 110 50 chr2 173902871 173903077 -76784777 - L2 LINE L2 -11 3302 3073 2362 111 0 0 chr2 173903077 173903383 -76784471 - AluSx SINE Alu -6 306 1 522 278 110 50 chr2 173903383 173903457 -76784397 - L2 LINE L2 -240 3073 3005 1719 104 0 0 chr2 173903457 173903795 -76784059 + L1M1 LINE L1 5101 5438 -743 1480 190 0 31 chr2 173903797 173904086 -76783768 + AluJb SINE Alu 1 280 -32 4651 87 36 29 chr2 173904090 173904791 -76783063 + L1MA2 LINE L1 5595 6300 -4 2174 131 3 6 chr2 173904798 173905111 -76782743 + AluSx SINE Alu 1 312 0 285 192 0 135 chr2 173905112 173905216 -76782638 - L2 LINE L2 -300 3013 2924 1841 175 0 0 chr2 173905580 173905872 -76781982 - AluJb SINE Alu -20 292 1 2087 230 86 34 chr2 173905886 173906217 -76781637 + L1M4 LINE L1 2874 3186 -2960 2013 135 3 10 chr2 173906217 173906520 -76781334 + AluSx SINE Alu 1 301 -11 2087 230 86 34 chr2 173906520 173906714 -76781140 + L1M4 LINE L1 3186 3368 -2778 2311 92 26 0 chr2 173906714 173907019 -76780835 + AluSq SINE Alu 1 313 0 2087 230 86 34 chr2 173907019 173907435 -76780419 + L1M4 LINE L1 3368 3865 -2281 1116 167 43 119 chr2 173907440 173907835 -76780019 + MLT1A1 LTR MaLR 1 365 0 900 202 0 13 chr2 173907835 173908157 -76779697 + MLT1A1-int LTR MaLR 1 375 -1360 4170 141 24 89 chr2 173908158 173909671 -76778183 - pTR5 LTR ERV1 0 2606 1524 1739 193 102 59 chr2 173909671 173910111 -76777743 + MLT1A1-int LTR MaLR 381 839 -896 2285 98 0 28 chr2 173910286 173910603 -76777251 - AluSx SINE Alu -4 308 1 1371 127 28 0 chr2 173910652 173910865 -76776989 + L1PA10 LINE L1 5940 6158 -10 951 264 144 22 chr2 173910895 173911374 -76776480 - L1MC/D LINE L1 -747 5399 4861 1938 124 62 49 chr2 173911374 173911416 -76776438 - THE1C LTR MaLR 0 375 335 2360 84 3 0 chr2 173911416 173911715 -76776139 + AluSp SINE Alu 4 303 -10 1938 124 62 49 chr2 173911715 173912042 -76775812 - THE1C LTR MaLR -40 335 1 951 264 144 22 chr2 173912042 173912363 -76775491 - L1MC/D LINE L1 -1285 4861 4581 896 161 235 40 chr2 173912506 173912606 -76775248 - MLT1A1 LTR MaLR -2 363 284 549 0 0 0 chr2 173912606 173912667 -76775187 + (TG)n Simple_repeat Simple_repeat 2 62 0 896 161 235 40 chr2 173912667 173912864 -76774990 - MLT1A1 LTR MaLR -81 284 8 3332 199 46 91 chr2 173912876 173913121 -76774733 - MLT1A1-int LTR MaLR -1 1734 1480 4321 148 14 17 chr2 173913121 173913886 -76773968 + L1MA4 LINE L1 5531 6293 -7 3332 199 46 91 chr2 173913886 173914086 -76773768 - MLT1A1-int LTR MaLR -255 1480 1273 3797 101 66 2 chr2 173914086 173914631 -76773223 - LTR19B LTR ERV1 0 580 1 3332 199 46 91 chr2 173914631 173915098 -76772756 - MLT1A1-int LTR MaLR -462 1273 862 279 266 53 26 chr2 173915347 173915460 -76772394 + L1MC4 LINE L1 7927 8042 0 259 188 27 134 chr2 173915450 173915497 -76772357 + L1MC5 LINE L1 7603 7653 -308 * 2170 123 3 0 chr2 173915497 173915799 -76772055 + AluSx SINE Alu 1 303 -9 259 188 27 134 chr2 173915799 173915852 -76772002 + L1MC5 LINE L1 7653 7710 -251 931 211 0 0 chr2 173915852 173916027 -76771827 - FAM SINE Alu 0 175 1 2579 147 9 20 chr2 173916031 173916481 -76771373 - L1MB3 LINE L1 -1 6182 5738 259 188 27 134 chr2 173916481 173916597 -76771257 + L1MC5 LINE L1 7713 7801 -160 906 269 98 52 chr2 173916619 173917066 -76770788 + L1MC4a LINE L1 5435 5902 -1906 305 204 56 99 chr2 173917093 173917161 -76770693 + L1MEd LINE L1 6 66 -6053 1815 137 3 24 chr2 173917161 173917453 -76770401 + AluJb SINE Alu 12 297 -15 305 204 56 99 chr2 173917453 173917526 -76770328 + L1MEd LINE L1 66 141 -5978 806 225 88 35 chr2 173918007 173918234 -76769620 - MER8 DNA MER2_type 0 239 1 2327 92 7 0 chr2 173918291 173918585 -76769269 - AluSp SINE Alu -17 296 1 2395 63 0 54 chr2 173918652 173918969 -76768885 - AluY SINE Alu -11 300 1 2371 90 3 31 chr2 173919788 173920109 -76767745 + AluSp SINE Alu 1 312 -1 189 0 0 0 chr2 173920109 173920130 -76767724 + (TA)n Simple_repeat Simple_repeat 1 21 0 230 318 0 0 chr2 173920505 173920612 -76767242 + A-rich Low_complexity Low_complexity 1 107 0 393 250 91 0 chr2 173920696 173920828 -76767026 + MIR SINE MIR 73 216 -46 376 219 171 8 chr2 173920833 173920956 -76766898 + L1MC4a LINE L1 5442 5584 -2224 219 88 0 0 chr2 173921095 173921129 -76766725 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 230 207 116 96 chr2 173921147 173921345 -76766509 + L1MC4a LINE L1 5792 5993 -1815 360 0 0 0 chr2 173921383 173921423 -76766431 + (TG)n Simple_repeat Simple_repeat 2 41 0 2426 70 3 3 chr2 173921514 173921815 -76766039 + AluSp SINE Alu 1 301 -12 223 155 12 60 chr2 173923460 173923544 -76764310 + (CCG)n Simple_repeat Simple_repeat 3 82 0 24 32 0 0 chr2 173923695 173923726 -76764128 + GC_rich Low_complexity Low_complexity 1 31 0 2420 70 0 0 chr2 173924195 173924507 -76763347 + AluSx SINE Alu 1 312 0 1896 166 10 0 chr2 173925099 173925406 -76762448 - AluSx SINE Alu 0 312 3 2473 55 0 3 chr2 173925564 173925857 -76761997 - AluY SINE Alu -19 292 1 496 257 107 33 chr2 173926846 173927118 -76760736 + L2 LINE L2 3016 3307 -6 21 0 0 0 chr2 173927387 173927408 -76760446 + AT_rich Low_complexity Low_complexity 1 21 0 1780 159 3 7 chr2 173927408 173927697 -76760157 - AluJo SINE Alu -24 288 1 1684 174 31 0 chr2 173927958 173928251 -76759603 + AluJo SINE Alu 1 302 -10 864 158 0 0 chr2 173928504 173928637 -76759217 + FLAM_C SINE Alu 1 133 0 1558 127 0 0 chr2 173929549 173929754 -76758100 + AluJb SINE Alu 1 205 -107 345 179 30 0 chr2 173929761 173929828 -76758026 + AluJb SINE Alu 234 302 0 1329 208 40 20 chr2 173930205 173930325 -76757529 + AluJo SINE Alu 1 117 -195 216 0 0 0 chr2 173930325 173930349 -76757505 + (CA)n Simple_repeat Simple_repeat 1 24 0 1329 208 40 20 chr2 173930349 173930526 -76757328 + AluJo SINE Alu 117 304 -8 2271 74 35 0 chr2 173930979 173931264 -76756590 + AluSp SINE Alu 1 295 -18 21 0 0 0 chr2 173931362 173931383 -76756471 + AT_rich Low_complexity Low_complexity 1 21 0 636 203 38 138 chr2 173932188 173932478 -76755376 + MIR SINE MIR 2 262 0 2860 159 62 19 chr2 173932767 173933296 -76754558 - MER68 LTR ERV1 -10 552 1 5639 47 33 0 chr2 173933313 173934010 -76753844 - L1PA6 LINE L1 -2 6152 5433 5826 87 7 25 chr2 173934139 173935198 -76752656 - L1PA8A LINE L1 -553 5578 4542 565 70 0 0 chr2 173935198 173935269 -76752585 - U3 snRNA snRNA -146 71 1 1034 164 110 138 chr2 173935436 173935790 -76752064 - MER7A DNA MER2_type -1 345 4 2214 118 3 10 chr2 173936355 173936669 -76751185 + AluSx SINE Alu 1 312 0 2398 91 0 3 chr2 173936673 173936971 -76750883 + AluY SINE Alu 1 297 -14 2001 118 66 0 chr2 173937054 173937342 -76750512 - AluSx SINE Alu -5 307 1 1826 121 10 42 chr2 173937668 173937974 -76749880 - AluSx SINE Alu -16 296 1 1155 131 0 6 chr2 173938787 173938955 -76748899 + AluSg/x SINE Alu 137 303 -9 275 170 0 0 chr2 173941034 173941087 -76746767 + AluSp/q SINE Alu 249 301 -2 2379 70 7 13 chr2 173941276 173941578 -76746276 + AluY SINE Alu 1 300 -11 2186 119 0 0 chr2 173941797 173942090 -76745764 - AluSx SINE Alu -19 293 1 885 127 55 6 chr2 173942875 173943040 -76744814 - L1MB7 LINE L1 0 6184 6012 207 0 0 0 chr2 173943428 173943451 -76744403 + (A)n Simple_repeat Simple_repeat 1 23 0 2317 107 3 0 chr2 173943600 173943908 -76743946 + AluSq SINE Alu 1 309 -4 202 320 95 30 chr2 173944788 173944924 -76742930 - MIR SINE MIR 0 262 107 1690 169 29 0 chr2 173944924 173945221 -76742633 + AluJb SINE Alu 1 305 0 202 320 95 30 chr2 173945221 173945283 -76742571 - MIR SINE MIR -155 107 50 1939 142 31 3 chr2 173946044 173946333 -76741521 - AluSx SINE Alu -15 297 1 24 0 0 0 chr2 173946495 173946519 -76741335 + AT_rich Low_complexity Low_complexity 1 24 0 1609 135 83 11 chr2 173946526 173946792 -76741062 + AluSc SINE Alu 1 285 -24 1550 174 85 7 chr2 173946802 173946922 -76740932 + AluJb SINE Alu 1 110 -202 194 0 0 37 chr2 173946922 173946949 -76740905 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1550 174 85 7 chr2 173946949 173947110 -76740744 + AluJb SINE Alu 110 304 -8 1753 157 3 23 chr2 173947312 173947612 -76740242 + AluSx SINE Alu 1 294 -18 913 199 6 0 chr2 173947619 173947775 -76740079 - AluJb SINE Alu -23 289 133 25 0 0 0 chr2 173947776 173947801 -76740053 + AT_rich Low_complexity Low_complexity 1 25 0 1905 123 51 27 chr2 173947801 173948094 -76739760 + AluSx SINE Alu 1 300 -12 282 240 90 38 chr2 173948113 173948282 -76739572 + L1ME3A LINE L1 5384 5565 -597 887 155 0 13 chr2 173948528 173948683 -76739171 + L1MC1 LINE L1 6181 6333 0 435 183 0 0 chr2 173949072 173949143 -76738711 - MER57A LTR ERV1 -37 366 296 1417 183 4 19 chr2 173949166 173949429 -76738425 - AluJb SINE Alu -29 283 25 2270 93 0 59 chr2 173949517 173949841 -76738013 + AluSx SINE Alu 1 305 -7 368 192 58 10 chr2 173949949 173950053 -76737801 - MIR SINE MIR -26 236 128 2364 66 10 20 chr2 173950797 173951102 -76736752 - AluSq SINE Alu -11 302 1 198 0 0 0 chr2 173952050 173952072 -76735782 + (A)n Simple_repeat Simple_repeat 1 22 0 467 268 78 28 chr2 173952889 173953068 -76734786 + MIR SINE MIR 1 188 -74 2874 107 21 5 chr2 173953081 173953402 -76734452 - LTR23 LTR ERV1 0 437 106 1778 145 103 34 chr2 173953402 173953753 -76734101 + THE1C LTR MaLR 1 375 0 2874 107 21 5 chr2 173953753 173953861 -76733993 - LTR23 LTR ERV1 -331 106 1 2217 109 6 10 chr2 173954302 173954641 -76733213 - AluSx SINE Alu 0 338 1 791 242 35 81 chr2 173954859 173954956 -76732898 + L1ME3A LINE L1 5554 5654 -547 1652 89 0 14 chr2 173954956 173955169 -76732685 + AluSg/x SINE Alu 85 294 -18 791 242 35 81 chr2 173955169 173955229 -76732625 + L1ME3A LINE L1 5654 5715 -486 2407 101 0 0 chr2 173955229 173955535 -76732319 + AluSg SINE Alu 1 306 -4 791 242 35 81 chr2 173955535 173955754 -76732100 + L1ME3A LINE L1 5715 5916 -285 2285 232 21 23 chr2 173955907 173956437 -76731417 - LTR31 LTR ERV1 -18 601 73 845 307 89 7 chr2 173956471 173956875 -76730979 - L2 LINE L2 -923 2391 1955 1457 197 46 75 chr2 173956887 173957258 -76730596 + MSTB2 LTR MaLR 98 457 0 885 283 109 27 chr2 173957294 173957661 -76730193 + MLT1J LTR MaLR 1 397 -114 234 0 0 0 chr2 173957885 173957911 -76729943 + (TG)n Simple_repeat Simple_repeat 1 26 0 239 157 88 147 chr2 173958413 173958515 -76729339 - MER3 DNA MER1_type -106 103 8 247 153 322 0 chr2 173958516 173958575 -76729279 - L1ME3 LINE L1 -150 6012 5935 1735 192 14 41 chr2 173958594 173958958 -76728896 - MLT1A1 LTR MaLR 0 365 12 1088 202 85 39 chr2 173958970 173959008 -76728846 - L1ME3 LINE L1 -369 5793 5758 1925 151 0 16 chr2 173959008 173959312 -76728542 - AluSx SINE Alu -13 299 1 1088 202 85 39 chr2 173959312 173959555 -76728299 - L1ME3 LINE L1 -404 5758 5499 1186 128 43 5 chr2 173959599 173959786 -76728068 - L1PB4 LINE L1 -2 6154 5961 2568 49 7 3 chr2 173959962 173960270 -76727584 + AluY SINE Alu 1 309 -2 534 200 108 0 chr2 173960569 173960689 -76727165 + FLAM_A SINE Alu 9 141 -1 2429 81 0 3 chr2 173960689 173960986 -76726868 + AluSg SINE Alu 1 296 -14 526 196 72 0 chr2 173961385 173961542 -76726312 - L1ME3 LINE L1 -676 5488 5312 638 100 185 69 chr2 173961551 173961681 -76726173 + AluJo SINE Alu 2 146 -166 683 282 6 20 chr2 173961817 173962157 -76725697 - L1ME3 LINE L1 -865 5281 4894 1859 153 0 33 chr2 173962208 173962515 -76725339 - AluJo SINE Alu -15 297 1 442 184 0 0 chr2 173962765 173962841 -76725013 - FLAM_A SINE Alu -57 85 10 295 259 186 21 chr2 173962857 173963093 -76724761 - LTR33 LTR ERVL -55 466 192 238 129 200 29 chr2 173963147 173963217 -76724637 - LTR33 LTR ERVL -439 82 1 1177 262 29 4 chr2 173963281 173963556 -76724298 + MER69 DNA AcHobo 1 282 -944 912 196 65 4 chr2 173963629 173963905 -76723949 + MER69 DNA AcHobo 1583 1875 -651 653 66 11 0 chr2 173963905 173963996 -76723858 + (TCTCCC)n Simple_repeat Simple_repeat 1 92 0 4061 59 21 4 chr2 173963996 173964507 -76723347 + SVA Other Other 57 576 -810 904 219 62 27 chr2 173964628 173964884 -76722970 - L1ME3 LINE L1 -276 5886 5622 1118 189 124 130 chr2 173964900 173964911 -76722943 + MER69 DNA AcHobo 1888 1898 -628 2047 116 14 3 chr2 173964911 173965195 -76722659 - AluSc SINE Alu -22 287 1 1118 189 124 130 chr2 173965195 173965718 -76722136 + MER69 DNA AcHobo 1898 2420 -106 2183 107 27 0 chr2 173965718 173966018 -76721836 - AluSx SINE Alu -4 308 1 1118 189 124 130 chr2 173966018 173966113 -76721741 + MER69 DNA AcHobo 2420 2514 -12 1787 163 0 7 chr2 173966284 173966561 -76721293 - AluJo SINE Alu -32 280 6 2426 88 0 7 chr2 173967036 173967342 -76720512 - AluSp SINE Alu -9 304 1 1717 229 49 45 chr2 173967422 173968201 -76719653 - L1MC5 LINE L1 -32 7929 7241 857 215 60 59 chr2 173968195 173968351 -76719503 - L1MC4a LINE L1 -632 7233 7079 * 2301 88 10 19 chr2 173968351 173968659 -76719195 + AluSg SINE Alu 5 309 -1 1590 145 26 46 chr2 173968661 173968965 -76718889 + AluJb SINE Alu 1 298 -14 857 215 60 59 chr2 173968965 173969099 -76718755 - L1MC4a LINE L1 -786 7079 6965 502 271 172 0 chr2 173969738 173969930 -76717924 - L2 LINE L2 -1360 1954 1730 427 125 9 161 chr2 173969949 173970061 -76717793 - FLAM_C SINE Alu -12 131 37 2055 105 70 0 chr2 173970073 173970359 -76717495 - AluSx SINE Alu -6 306 1 1862 150 3 33 chr2 173970410 173970710 -76717144 + AluSx SINE Alu 1 291 -21 326 285 76 114 chr2 173970752 173971201 -76716653 - L2 LINE L2 -1670 1644 1213 360 0 0 0 chr2 173971357 173971397 -76716457 + (A)n Simple_repeat Simple_repeat 1 40 0 224 259 45 27 chr2 173971453 173971565 -76716289 - L2 LINE L2 -2634 680 567 2212 99 7 3 chr2 173971607 173971909 -76715945 + AluSc SINE Alu 1 303 -6 1884 130 8 0 chr2 173972033 173972322 -76715532 + AluSx SINE Alu 21 311 0 311 232 260 34 chr2 173973977 173974154 -76713700 + L2 LINE L2 2924 3140 -173 2310 104 0 3 chr2 173974154 173974463 -76713391 + AluSc SINE Alu 1 308 -1 353 159 55 117 chr2 173974493 173974590 -76713264 - MER69 DNA AcHobo -3 2523 2436 2087 64 107 4 chr2 173974590 173974870 -76712984 + AluY SINE Alu 1 309 -2 353 159 55 117 chr2 173974870 173974917 -76712937 - MER69 DNA AcHobo -90 2436 2388 329 281 48 42 chr2 173975092 173975259 -76712595 + L2 LINE L2 3142 3309 -4 249 288 95 78 chr2 173975288 173975391 -76712463 + L2 LINE L2 3066 3166 -147 2007 131 7 10 chr2 173975391 173975688 -76712166 - AluSx SINE Alu -16 296 1 249 288 95 78 chr2 173975688 173975827 -76712027 + L2 LINE L2 3166 3312 -1 22 56 0 0 chr2 173975957 173975993 -76711861 + AT_rich Low_complexity Low_complexity 1 36 0 817 224 162 26 chr2 173976287 173976590 -76711264 - L1MC4a LINE L1 -1841 5967 5624 2213 117 0 3 chr2 173977234 173977532 -76710322 - AluSx SINE Alu -15 297 1 422 229 0 10 chr2 173977683 173977779 -76710075 - L2 LINE L2 -505 2809 2715 1683 179 17 7 chr2 173977989 173978290 -76709564 - AluJb SINE Alu -8 304 1 1738 186 0 34 chr2 173978702 173978888 -76708966 - AluJo SINE Alu 0 312 140 2418 84 3 0 chr2 173978888 173979184 -76708670 - AluSx SINE Alu -15 297 1 1738 186 0 34 chr2 173979184 173979320 -76708534 - AluJo SINE Alu -172 140 1 703 304 61 20 chr2 173979690 173980036 -76707818 + L1MC5 LINE L1 5488 5847 -1961 1852 172 13 0 chr2 173983078 173983380 -76704474 - AluJb SINE Alu -6 306 1 1908 150 28 0 chr2 173983780 173984066 -76703788 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr2 173984077 173984098 -76703756 + AT_rich Low_complexity Low_complexity 1 21 0 369 0 0 0 chr2 173984156 173984197 -76703657 + (TG)n Simple_repeat Simple_repeat 1 41 0 339 130 0 0 chr2 173984200 173984254 -76703600 + (GA)n Simple_repeat Simple_repeat 1 54 0 690 168 72 8 chr2 173984440 173984565 -76703289 - AluJo SINE Alu -175 137 5 1816 189 24 92 chr2 173984593 173984960 -76702894 + L1MC5 LINE L1 6646 6966 -995 2356 82 0 16 chr2 173984960 173985263 -76702591 + AluSc SINE Alu 1 298 -11 1816 189 24 92 chr2 173985263 173985439 -76702415 + L1MC5 LINE L1 6966 7152 -809 2541 59 0 0 chr2 173985446 173985736 -76702118 + AluY SINE Alu 1 290 -21 1268 95 5 11 chr2 173986777 173986967 -76700887 - L1PA14 LINE L1 -2 6159 5971 2049 117 0 7 chr2 173987066 173987372 -76700482 + AluSc SINE Alu 1 304 0 841 200 222 50 chr2 173987373 173987693 -76700161 + MLT1D LTR MaLR 131 505 0 281 268 49 55 chr2 173987760 173987924 -76699930 + L1ME3A LINE L1 6008 6170 0 5188 123 22 21 chr2 173988810 173988940 -76698914 - L1PA14 LINE L1 0 6161 6033 2013 152 3 0 chr2 173988940 173989236 -76698618 - AluSx SINE Alu -15 297 1 5188 123 22 21 chr2 173989236 173989920 -76697934 - L1PA14 LINE L1 -128 6033 5346 2414 84 3 3 chr2 173989934 173990242 -76697612 + AluSp SINE Alu 1 308 -5 2471 84 0 0 chr2 173990242 173990553 -76697301 + AluY SINE Alu 1 311 0 1796 167 37 7 chr2 173990716 173991016 -76696838 - AluJo SINE Alu -3 309 1 2079 120 11 0 chr2 173991192 173991475 -76696379 + AluSx SINE Alu 1 286 -26 189 0 0 0 chr2 173991580 173991601 -76696253 + (T)n Simple_repeat Simple_repeat 1 21 0 495 233 25 8 chr2 173991613 173991733 -76696121 - MLT1L LTR MaLR -359 256 135 411 221 58 0 chr2 173992034 173992120 -76695734 + MLT1D LTR MaLR 1 91 -414 492 178 37 12 chr2 173992142 173992252 -76695602 + MLT1D LTR MaLR 410 505 0 230 205 107 107 chr2 173992310 173992432 -76695422 - MLT1K LTR MaLR -17 571 450 784 105 0 0 chr2 173992533 173992638 -76695216 - MSTB1 LTR MaLR -327 105 1 6232 183 67 71 chr2 173992638 173994032 -76693822 - MSTB1-int LTR MaLR 0 1651 233 30 0 0 0 chr2 173994032 173994062 -76693792 + AT_rich Low_complexity Low_complexity 1 30 0 6232 183 67 71 chr2 173994062 173994187 -76693667 - MSTB1-int LTR MaLR -1418 233 109 1311 256 40 44 chr2 173994219 173994550 -76693304 + LTR38 LTR ERV1 86 416 -140 3454 81 19 2 chr2 173994550 173995022 -76692832 + L1PA11 LINE L1 5693 6172 -2 1311 256 40 44 chr2 173995022 173995163 -76692691 + LTR38 LTR ERV1 416 556 0 680 146 0 0 chr2 173995163 173995273 -76692581 - MSTB1-int LTR MaLR -1541 110 1 2311 124 67 38 chr2 173995273 173995348 -76692506 - MSTB1 LTR MaLR 0 432 361 2198 100 30 3 chr2 173995348 173995648 -76692206 + AluSc SINE Alu 1 308 -1 2311 124 67 38 chr2 173995648 173995992 -76691862 - MSTB1 LTR MaLR -71 361 1 587 191 96 20 chr2 173996273 173996539 -76691315 - MLT1B LTR MaLR 0 390 48 813 107 0 0 chr2 173996802 173996942 -76690912 + (TA)n Simple_repeat Simple_repeat 2 141 0 1668 160 22 4 chr2 173996942 173997217 -76690637 - AluJo SINE Alu -17 295 16 1002 127 0 0 chr2 173997419 173997553 -76690301 + AluSq/x SINE Alu 1 134 -179 21 89 0 0 chr2 173998141 173998197 -76689657 + AT_rich Low_complexity Low_complexity 1 56 0 641 267 124 9 chr2 173998265 173998613 -76689241 - L1ME4a LINE L1 -187 5934 5547 186 290 93 56 chr2 173998992 173999099 -76688755 - MIR3 SINE MIR -94 114 4 851 107 74 0 chr2 173999522 173999644 -76688210 - FLAM_C SINE Alu -2 131 1 230 315 0 0 chr2 173999878 173999970 -76687884 - L1MC4 LINE L1 -1339 6703 6612 246 229 0 62 chr2 173999999 174000095 -76687759 - L1MC4 LINE L1 -1339 6703 6614 432 218 232 0 chr2 174001354 174001496 -76686358 + MER96 DNA MER1_type 1 175 0 518 280 131 33 chr2 174001668 174001866 -76685988 + L2 LINE L2 2945 3122 -191 1823 164 3 7 chr2 174001866 174002158 -76685696 - AluJo SINE Alu -9 303 13 518 280 131 33 chr2 174002158 174002295 -76685559 + L2 LINE L2 3122 3313 0 889 147 0 0 chr2 174002417 174002546 -76685308 + FLAM_A SINE Alu 8 136 -6 1729 114 72 88 chr2 174002602 174002909 -76684945 - AluSx SINE Alu -10 302 1 182 270 124 22 chr2 174003436 174003525 -76684329 + L2 LINE L2 3175 3272 0 224 325 53 9 chr2 174003726 174003840 -76684014 - MIR3 SINE MIR -30 178 60 2578 62 0 7 chr2 174004471 174004780 -76683074 - AluY SINE Alu -4 307 1 1625 118 151 15 chr2 174004808 174005080 -76682774 + AluSx SINE Alu 1 309 -3 2050 129 3 3 chr2 174005154 174005448 -76682406 + AluSg SINE Alu 1 294 -16 24 53 0 0 chr2 174005997 174006035 -76681819 + AT_rich Low_complexity Low_complexity 1 38 0 627 288 34 34 chr2 174006277 174006510 -76681344 - Charlie8 DNA MER1_type -2146 271 39 21 36 0 0 chr2 174006601 174006629 -76681225 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 174006776 174006798 -76681056 + AT_rich Low_complexity Low_complexity 1 22 0 725 254 46 18 chr2 174006936 174007153 -76680701 + MIR SINE MIR 37 259 -3 721 249 39 35 chr2 174007465 174007694 -76680160 + MIR SINE MIR 12 241 -21 660 175 14 35 chr2 174008840 174008983 -76678871 + Tigger3(Golem) DNA MER2_type 52 191 -2838 * 3366 116 252 44 chr2 174008972 174009218 -76678636 + Tigger3(Golem) DNA MER2_type 2154 2347 -682 239 0 32 0 chr2 174009218 174009249 -76678605 + (TA)n Simple_repeat Simple_repeat 1 32 0 3366 116 252 44 chr2 174009249 174009263 -76678591 + Tigger3(Golem) DNA MER2_type 2347 2357 -672 2534 61 0 0 chr2 174009263 174009557 -76678297 + AluY SINE Alu 1 294 -17 3366 116 252 44 chr2 174009557 174009615 -76678239 + Tigger3(Golem) DNA MER2_type 2357 2402 -627 1633 169 7 11 chr2 174009615 174009894 -76677960 + AluJo SINE Alu 19 296 -16 3366 116 252 44 chr2 174009894 174010298 -76677556 + Tigger3(Golem) DNA MER2_type 2402 3029 0 234 289 141 7 chr2 174010375 174010510 -76677344 - L2 LINE L2 -191 3081 2929 580 214 6 13 chr2 174010932 174011091 -76676763 + GA-rich Low_complexity Low_complexity 2 159 0 269 194 0 15 chr2 174011116 174011183 -76676671 + GA-rich Low_complexity Low_complexity 1 66 0 720 153 0 9 chr2 174011603 174011714 -76676140 + FLAM_C SINE Alu 2 111 -32 36 23 0 0 chr2 174011727 174011770 -76676084 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr2 174012044 174012066 -76675788 + AT_rich Low_complexity Low_complexity 1 22 0 2349 95 0 0 chr2 174012110 174012406 -76675448 + AluSx SINE Alu 16 311 -1 915 229 22 13 chr2 174012737 174012964 -76674890 - MIR SINE MIR -10 252 24 23 0 0 0 chr2 174014758 174014781 -76673073 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr2 174015573 174015602 -76672252 + GC_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr2 174015657 174015693 -76672161 + GC_rich Low_complexity Low_complexity 1 36 0 235 227 27 0 chr2 174015762 174015877 -76671977 + (CCCCG)n Simple_repeat Simple_repeat 1 118 0 285 146 0 0 chr2 174016383 174016431 -76671423 + (TG)n Simple_repeat Simple_repeat 2 49 0 317 302 0 0 chr2 174017071 174017157 -76670697 + MER89 LTR ERV1 174 259 -300 1415 121 78 51 chr2 174017157 174017414 -76670440 - AluJo SINE Alu -15 297 34 1489 158 46 26 chr2 174017414 174017718 -76670136 + MER89 LTR ERV1 250 559 0 180 206 0 48 chr2 174017795 174017858 -76669996 + MER5A DNA MER1_type 109 168 -21 312 293 54 48 chr2 174017965 174018132 -76669722 + MIR SINE MIR 50 217 -45 23 33 0 0 chr2 174018973 174019003 -76668851 + AT_rich Low_complexity Low_complexity 1 30 0 1141 211 218 63 chr2 174019125 174019171 -76668683 + Charlie2a DNA MER1_type 1754 1792 -1070 2280 107 0 0 chr2 174019171 174019462 -76668392 + AluSg SINE Alu 1 291 -19 1141 211 218 63 chr2 174019462 174019482 -76668372 + Charlie2a DNA MER1_type 1792 1808 -1054 368 304 44 15 chr2 174019482 174019617 -76668237 - MER91C DNA MER1_type -1 139 1 1141 211 218 63 chr2 174019617 174019812 -76668042 + Charlie2a DNA MER1_type 1808 1972 -890 2175 131 3 0 chr2 174019812 174020117 -76667737 - AluSx SINE Alu -6 306 1 1141 211 218 63 chr2 174020117 174020501 -76667353 + Charlie2a DNA MER1_type 1972 2501 -361 5463 176 47 11 chr2 174020543 174020963 -76666891 + Tigger6a DNA MER2_type 14 417 -1180 2331 106 3 0 chr2 174020963 174021265 -76666589 + AluSq SINE Alu 1 303 -10 5463 176 47 11 chr2 174021265 174021877 -76665977 + Tigger6a DNA MER2_type 417 1083 0 235 250 0 16 chr2 174021880 174021944 -76665910 + Charlie2a DNA MER1_type 2502 2564 -298 873 208 87 0 chr2 174022138 174022369 -76665485 + Charlie2a DNA MER1_type 2574 2824 -38 1056 258 10 0 chr2 174022531 174022852 -76665002 - AluY SINE Alu 0 324 1 299 120 60 0 chr2 174022885 174022935 -76664919 - MLT1A1 LTR MaLR -312 53 1 999 201 0 6 chr2 174023343 174023522 -76664332 + AluJb SINE Alu 113 290 -22 216 0 0 0 chr2 174023706 174023730 -76664124 + (A)n Simple_repeat Simple_repeat 1 24 0 2492 87 0 0 chr2 174024044 174024343 -76663511 + AluSx SINE Alu 1 299 -13 923 197 4 82 chr2 174024671 174024904 -76662950 + MER20 DNA MER1_type 5 219 0 1904 125 31 68 chr2 174025308 174025512 -76662342 + LTR32 LTR ERVL 15 202 -269 2647 52 0 3 chr2 174025512 174025821 -76662033 - AluY SINE Alu -3 308 1 1904 125 31 68 chr2 174025821 174025967 -76661887 + LTR32 LTR ERVL 202 352 -119 759 186 19 19 chr2 174025966 174026122 -76661732 + LTR32 LTR ERVL 316 471 0 * 393 232 32 0 chr2 174026221 174026316 -76661538 + MER5A DNA MER1_type 9 106 -83 1708 135 0 4 chr2 174026536 174026780 -76661074 + AluSp SINE Alu 1 243 -70 854 169 22 64 chr2 174026870 174027128 -76660726 + LTR18B LTR ERVL 1 294 -320 658 200 0 22 chr2 174027131 174027266 -76660588 + LTR18B LTR ERVL 477 608 -6 13400 170 26 28 chr2 174027276 174029670 -76658184 + HERVL18 LTR ERVL 2 2452 -3595 4453 167 45 71 chr2 174029667 174030552 -76657302 + HERVL18 LTR ERVL 2718 3579 -2468 * 10845 147 11 13 chr2 174030554 174032210 -76655644 + HERVL18 LTR ERVL 4394 6047 0 854 182 18 38 chr2 174032363 174032835 -76655019 + LTR18B LTR ERVL 1 614 0 468 265 39 44 chr2 174032995 174033180 -76654674 - MIR3 SINE MIR -6 202 18 267 292 110 14 chr2 174033256 174033465 -76654389 + L1ME4a LINE L1 5817 6045 -76 894 189 23 23 chr2 174033568 174033743 -76654111 + MER45A DNA AcHobo 4 178 0 34 55 0 0 chr2 174033799 174033854 -76654000 + AT_rich Low_complexity Low_complexity 1 55 0 1939 208 139 13 chr2 174034064 174034616 -76653238 - MLT1E3 LTR MaLR -2 622 1 1623 158 81 14 chr2 174034704 174034824 -76653030 + AluJo SINE Alu 1 112 -200 225 0 0 0 chr2 174034824 174034849 -76653005 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 1623 158 81 14 chr2 174034849 174035012 -76652842 + AluJo SINE Alu 112 303 -9 1555 201 169 34 chr2 174035721 174036165 -76651689 + MLT1D LTR MaLR 2 505 0 250 284 198 6 chr2 174036170 174036332 -76651522 - MIR SINE MIR -67 195 3 1416 277 19 33 chr2 174036367 174036847 -76651007 + L1MEc LINE L1 57 529 -5867 783 231 59 29 chr2 174037052 174037141 -76650713 + L1M4 LINE L1 3326 3411 -2735 2112 181 35 123 chr2 174037141 174037281 -76650573 + MLT1F1 LTR MaLR 3 154 -413 2225 54 57 4 chr2 174037281 174037560 -76650294 - AluY SINE Alu -17 294 1 2112 181 35 123 chr2 174037560 174037599 -76650255 + MLT1F1 LTR MaLR 154 195 -372 2045 118 33 7 chr2 174037599 174037904 -76649950 - AluSq SINE Alu 0 313 1 2112 181 35 123 chr2 174037904 174038342 -76649512 + MLT1F1 LTR MaLR 195 567 0 783 231 59 29 chr2 174038342 174038490 -76649364 + L1M4 LINE L1 3411 3570 -2576 353 225 137 10 chr2 174038493 174038718 -76649136 - L1MDa LINE L1 -4736 1848 1459 479 271 94 59 chr2 174038754 174038789 -76649065 - L1MDa LINE L1 -4906 1624 1592 2346 88 0 16 chr2 174038789 174039094 -76648760 - AluY SINE Alu -11 300 1 479 271 94 59 chr2 174039094 174039356 -76648498 - L1MDa LINE L1 -4938 1592 1308 1228 140 89 16 chr2 174039360 174039617 -76648237 - L1MA5A LINE L1 -1 6296 6021 2130 220 119 19 chr2 174039831 174040368 -76647486 - MLT1E LTR MaLR -2 591 1 21 0 0 0 chr2 174040767 174040788 -76647066 + AT_rich Low_complexity Low_complexity 1 21 0 847 138 8 0 chr2 174040793 174040923 -76646931 - FLAM_C SINE Alu -2 131 1 809 167 0 8 chr2 174041028 174041160 -76646694 - FLAM_C SINE Alu -12 131 1 398 297 33 24 chr2 174041181 174041338 -76646516 + MLT1E LTR MaLR 313 504 -150 21 0 0 0 chr2 174041463 174041484 -76646370 + AT_rich Low_complexity Low_complexity 1 21 0 1460 184 32 11 chr2 174041927 174042209 -76645645 + AluJb SINE Alu 1 288 -24 1070 237 16 83 chr2 174042286 174042741 -76645113 + MLT1J LTR MaLR 3 511 0 2490 129 7 2 chr2 174043987 174044390 -76643464 + L1PA11 LINE L1 4873 5277 -869 6032 79 13 21 chr2 174044544 174045456 -76642398 + L1PA11 LINE L1 5270 6174 0 600 286 138 9 chr2 174045862 174046093 -76641761 - MIR SINE MIR -1 261 1 2318 65 14 0 chr2 174047144 174047434 -76640420 + AluY SINE Alu 1 294 -17 1012 201 216 33 chr2 174048412 174048801 -76639053 + LTR40b LTR ERVL 1 460 -2 2475 37 0 7 chr2 174048804 174049100 -76638754 - AluY SINE Alu -17 294 1 931 146 224 0 chr2 174049519 174049711 -76638143 - MER46A DNA MER2_type -1 235 1 383 287 48 52 chr2 174049814 174050044 -76637810 - L1M4 LINE L1 -2993 3153 2925 1258 207 50 18 chr2 174050074 174050354 -76637500 - AluJo SINE Alu -20 292 4 1196 154 27 0 chr2 174050521 174050709 -76637145 - AluSg/x SINE Alu 0 310 118 2064 131 7 3 chr2 174051020 174051318 -76636536 + AluJb SINE Alu 1 299 -13 22 0 0 0 chr2 174051318 174051340 -76636514 + AT_rich Low_complexity Low_complexity 1 22 0 1624 168 42 71 chr2 174051342 174051478 -76636376 + L1 LINE L1 3055 3193 -2953 192 40 0 0 chr2 174051478 174051503 -76636351 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 1624 168 42 71 chr2 174051503 174051520 -76636334 + L1 LINE L1 3193 3209 -2937 2260 115 0 10 chr2 174051520 174051816 -76636038 - AluSg SINE Alu -17 293 1 1624 168 42 71 chr2 174051816 174052137 -76635717 + L1 LINE L1 3209 3516 -2630 687 73 9 27 chr2 174052136 174052246 -76635608 + MSTA-int LTR MaLR 1473 1580 0 * 2162 126 98 23 chr2 174052246 174052644 -76635210 + MSTA LTR MaLR 1 428 0 1641 195 27 3 chr2 174052782 174053079 -76634775 - AluJb SINE Alu -8 304 1 317 285 80 131 chr2 174054304 174054655 -76633199 + L1M2 LINE L1 794 1126 -5723 1433 263 30 26 chr2 174055984 174056414 -76631440 + L1MB7 LINE L1 1 432 -6110 1336 165 71 85 chr2 174056461 174056631 -76631223 + MSTD LTR MaLR 31 202 -194 362 21 21 0 chr2 174056631 174056678 -76631176 + (TG)n Simple_repeat Simple_repeat 1 48 0 1336 165 71 85 chr2 174056678 174056871 -76630983 + MSTD LTR MaLR 202 389 -7 2522 190 65 20 chr2 174056871 174057482 -76630372 + L1MB7 LINE L1 502 1140 -5402 2089 192 24 53 chr2 174057693 174058425 -76629429 + L1MB7 LINE L1 1143 1862 -4784 1963 90 0 0 chr2 174058436 174058681 -76629173 - AluSq SINE Alu -11 302 58 991 213 44 4 chr2 174058700 174058949 -76628905 + L1MB7 LINE L1 3993 4251 -2393 961 155 47 0 chr2 174058961 174059109 -76628745 + FAM SINE Alu 11 165 -20 2456 186 83 31 chr2 174059124 174059862 -76627992 + L1MB7 LINE L1 4237 5012 -1632 2647 86 14 0 chr2 174059864 174060214 -76627640 + THE1A LTR MaLR 1 355 0 10826 82 5 69 chr2 174060214 174061903 -76625951 + THE1A-int LTR MaLR 1 1580 0 2580 97 8 0 chr2 174061903 174062255 -76625599 + THE1A LTR MaLR 1 355 0 2640 129 24 12 chr2 174062415 174062834 -76625020 + MSTC LTR MaLR 5 428 0 4198 171 38 33 chr2 174062834 174063053 -76624801 + L1MB7 LINE L1 5049 5265 -1417 892 222 0 6 chr2 174063053 174063229 -76624625 + FAM SINE Alu 1 175 0 4198 171 38 33 chr2 174063229 174064281 -76623573 + L1MB7 LINE L1 5265 6310 -372 1865 140 4 11 chr2 174064281 174064559 -76623295 + AluSx SINE Alu 1 276 -36 225 0 0 0 chr2 174064563 174064588 -76623266 + (CAA)n Simple_repeat Simple_repeat 1 25 0 4198 171 38 33 chr2 174064588 174064927 -76622927 + L1MB7 LINE L1 6312 6666 -16 639 299 170 9 chr2 174066273 174066497 -76621357 - MIR SINE MIR 0 262 3 970 303 34 67 chr2 174066497 174067065 -76620789 + LTR67 LTR ERVL 6 554 -3 284 281 94 6 chr2 174067112 174067283 -76620571 - MLT1L LTR MaLR 0 615 430 516 335 0 18 chr2 174067684 174067848 -76620006 - MIR SINE MIR -82 180 20 530 230 26 0 chr2 174068353 174068365 -76619489 - L1MA10 LINE L1 -3 6331 6320 464 272 24 47 chr2 174068365 174068578 -76619276 - L1ME1 LINE L1 -6 6160 5953 4941 219 45 42 chr2 174068584 174069445 -76618409 - L1ME1 LINE L1 -288 5878 5021 1335 128 57 64 chr2 174069445 174069533 -76618321 + L1PA15 LINE L1 5899 5986 -179 2285 95 3 10 chr2 174069533 174069839 -76618015 - AluY SINE Alu -7 304 1 1335 128 57 64 chr2 174069839 174070015 -76617839 + L1PA15 LINE L1 5986 6161 -4 4941 219 45 42 chr2 174070015 174070386 -76617468 - L1ME1 LINE L1 -1145 5021 4653 2343 107 0 0 chr2 174070386 174070694 -76617160 - AluSx SINE Alu -4 308 1 4941 219 45 42 chr2 174070694 174070865 -76616989 - L1ME1 LINE L1 -1513 4653 4484 2464 83 3 3 chr2 174070865 174071178 -76616676 - AluSp SINE Alu 0 313 1 4941 219 45 42 chr2 174071178 174072001 -76615853 - L1ME1 LINE L1 -1682 4484 3652 631 191 30 0 chr2 174072608 174072739 -76615115 + L1ME1 LINE L1 5920 6054 -112 306 326 78 17 chr2 174072917 174073328 -76614526 + L1M4 LINE L1 4695 5130 -1016 2950 117 7 2 chr2 174073531 174073957 -76613897 + MSTA LTR MaLR 1 428 0 25 51 0 0 chr2 174074065 174074104 -76613750 + AT_rich Low_complexity Low_complexity 1 39 0 320 260 110 0 chr2 174074719 174074819 -76613035 - L1ME4a LINE L1 -2 6119 6009 288 286 27 18 chr2 174074847 174074959 -76612895 - MLT1H LTR MaLR -16 533 421 611 212 176 0 chr2 174075364 174075534 -76612320 - L1ME1 LINE L1 -6 6160 5961 2115 202 21 66 chr2 174076342 174076920 -76610934 + MLT2B3 LTR ERVL 1 552 -2 789 309 72 72 chr2 174077358 174077466 -76610388 - L2 LINE L2 -1 3271 3164 2126 123 0 7 chr2 174077466 174077759 -76610095 + AluSq SINE Alu 1 291 -22 789 309 72 72 chr2 174077759 174078133 -76609721 - L2 LINE L2 -108 3164 2791 1354 230 58 6 chr2 174078288 174078796 -76609058 + MLT1F1 LTR MaLR 1 567 0 553 265 112 6 chr2 174079257 174079427 -76608427 + L2 LINE L2 2182 2369 -945 717 65 0 0 chr2 174079443 174079536 -76608318 - AluY SINE Alu -11 300 208 959 310 116 28 chr2 174079542 174080081 -76607773 + L2 LINE L2 2415 3000 -272 13840 109 12 9 chr2 174080214 174081798 -76606056 + Tigger1 DNA MER2_type 2 1596 -822 2482 78 7 0 chr2 174081798 174082106 -76605748 + AluSq SINE Alu 1 310 -3 13840 109 12 9 chr2 174082106 174082626 -76605228 + Tigger1 DNA MER2_type 1596 2113 -305 262 236 45 34 chr2 174082641 174082730 -76605124 - L2 LINE L2 -65 3248 3159 1506 138 13 107 chr2 174082989 174083102 -76604752 + AluJo SINE Alu 1 123 -189 2391 155 84 2 chr2 174083102 174083516 -76604338 + MER83 LTR ERV1 1 448 0 1506 138 13 107 chr2 174083516 174083720 -76604134 + AluJo SINE Alu 123 288 -24 667 239 172 40 chr2 174083755 174084127 -76603727 + LTR52 LTR ERVL 1 421 0 256 314 114 0 chr2 174084241 174084381 -76603473 + MER117 DNA MER1_type 32 187 -10 25 31 0 0 chr2 174084508 174084540 -76603314 + AT_rich Low_complexity Low_complexity 1 32 0 1927 123 10 33 chr2 174084808 174085110 -76602744 - AluSx SINE Alu -15 297 3 25 0 0 0 chr2 174085210 174085235 -76602619 + AT_rich Low_complexity Low_complexity 1 25 0 901 141 0 0 chr2 174085518 174085646 -76602208 + AluJo SINE Alu 1 128 -174 1941 135 72 21 chr2 174086797 174087183 -76600671 - L1MA4A LINE L1 -11 6292 5887 1363 106 0 6 chr2 174088069 174088248 -76599606 - AluSq SINE Alu -135 178 1 300 268 49 0 chr2 174088294 174088376 -76599478 - MLT1J LTR MaLR -202 309 224 696 179 0 22 chr2 174088400 174088584 -76599270 + CT-rich Low_complexity Low_complexity 1 180 0 1210 178 9 13 chr2 174088586 174088843 -76599011 - AluJo SINE Alu 0 336 81 294 283 85 0 chr2 174088843 174088949 -76598905 - MLT1J LTR MaLR -297 214 100 377 300 82 6 chr2 174089027 174089197 -76598657 - HAL1 LINE L1 -1346 1161 979 307 221 15 29 chr2 174089199 174089267 -76598587 + MIR SINE MIR 31 97 -111 706 173 65 0 chr2 174089633 174089772 -76598082 + AluJo SINE Alu 137 284 -18 22 0 0 0 chr2 174090128 174090150 -76597704 + AT_rich Low_complexity Low_complexity 1 22 0 316 204 71 10 chr2 174090215 174090313 -76597541 - L1ME4a LINE L1 -50 6071 5968 571 276 0 16 chr2 174090472 174090657 -76597197 - L1ME4a LINE L1 -359 5762 5581 480 307 173 37 chr2 174090979 174091442 -76596412 - L2 LINE L2 -954 2360 1835 775 222 73 129 chr2 174091444 174091827 -76596027 + L2 LINE L2 2711 3114 -199 531 82 0 0 chr2 174091827 174091900 -76595954 + (TA)n Simple_repeat Simple_repeat 2 74 0 2587 35 0 16 chr2 174091906 174092216 -76595638 - AluY SINE Alu -6 305 1 775 222 73 129 chr2 174092216 174092308 -76595546 + L2 LINE L2 3119 3212 -101 900 229 0 0 chr2 174092308 174092474 -76595380 - FAM SINE Alu -9 166 1 775 222 73 129 chr2 174092474 174092552 -76595302 + L2 LINE L2 3212 3293 -20 642 152 0 0 chr2 174092955 174093054 -76594800 + FLAM_C SINE Alu 38 136 -7 1630 97 169 0 chr2 174093275 174093523 -76594331 + AluSx SINE Alu 1 290 -12 1762 140 44 20 chr2 174093523 174093685 -76594169 - AluJo SINE Alu -12 300 126 2401 84 0 0 chr2 174093685 174093983 -76593871 - AluSg SINE Alu -12 298 1 1762 140 44 20 chr2 174093983 174094113 -76593741 - AluJo SINE Alu -186 126 1 333 0 0 0 chr2 174094158 174094195 -76593659 + (CA)n Simple_repeat Simple_repeat 2 38 0 2085 82 36 14 chr2 174094994 174095274 -76592580 - AluSp SINE Alu -17 296 11 1143 217 39 68 chr2 174096161 174096452 -76591402 - L1ME4a LINE L1 -588 5578 5280 1410 170 57 3 chr2 174096452 174096735 -76591119 - L1MB4 LINE L1 -1 6179 5882 2203 85 13 29 chr2 174096739 174097055 -76590799 - AluSq SINE Alu -2 311 1 1143 217 39 68 chr2 174097055 174097221 -76590633 - L1ME4a LINE L1 -889 5277 5152 329 271 70 8 chr2 174097312 174097441 -76590413 - L1MC5 LINE L1 -847 7114 6978 21 36 0 0 chr2 174097960 174097988 -76589866 + AT_rich Low_complexity Low_complexity 1 28 0 1449 177 115 12 chr2 174099262 174099616 -76588238 - L1MB5 LINE L1 0 6174 5783 838 192 24 0 chr2 174099843 174100010 -76587844 + L1MB5 LINE L1 5948 6118 -56 3984 142 129 6 chr2 174100052 174100939 -76586915 - L1MB2 LINE L1 0 6171 5172 608 263 59 60 chr2 174100987 174101283 -76586571 - L1MC5 LINE L1 -355 5809 5586 1051 217 199 15 chr2 174101625 174101952 -76585902 + MER119 DNA MER1_type 5 391 -192 923 164 13 0 chr2 174101999 174102151 -76585703 - FRAM SINE Alu -10 166 13 497 183 29 29 chr2 174102158 174102262 -76585592 + MER119 DNA MER1_type 480 583 0 21 0 0 0 chr2 174108951 174108972 -76578882 + AT_rich Low_complexity Low_complexity 1 21 0 220 321 30 52 chr2 174109306 174109440 -76578414 - L2 LINE L2 -19 3294 3164 382 374 86 40 chr2 174109486 174109764 -76578090 - L2 LINE L2 -353 2961 2671 582 224 66 0 chr2 174109811 174109963 -76577891 + Charlie1 DNA MER1_type 65 226 -2535 * 640 183 15 7 chr2 174109957 174110094 -76577760 + Charlie1 DNA MER1_type 2619 2756 -5 304 335 234 13 chr2 174110259 174110572 -76577282 - L2 LINE L2 -823 2491 2248 1866 155 7 4 chr2 174110572 174110850 -76577004 + AluJb SINE Alu 5 283 -29 1760 107 12 8 chr2 174110850 174111093 -76576761 + AluSx SINE Alu 50 294 -18 304 335 234 13 chr2 174111093 174111154 -76576700 - L2 LINE L2 -1065 2249 2033 193 333 73 27 chr2 174111154 174111304 -76576550 - L2 LINE L2 -1387 1927 1771 21 0 0 0 chr2 174111376 174111397 -76576457 + AT_rich Low_complexity Low_complexity 1 21 0 2308 59 3 14 chr2 174112014 174112321 -76575533 - AluY SINE Alu 0 304 1 202 214 24 0 chr2 174112849 174112891 -76574963 + CT-rich Low_complexity Low_complexity 1 43 0 567 211 109 17 chr2 174114888 174115063 -76572791 + L1MC5 LINE L1 7036 7226 -735 720 217 141 52 chr2 174115141 174115624 -76572230 + L1MC5 LINE L1 7375 7900 -61 1808 160 23 20 chr2 174115810 174116116 -76571738 - AluJb SINE Alu 0 312 6 648 198 0 24 chr2 174116124 174116250 -76571604 - FLAM_A SINE Alu -8 125 3 189 0 0 0 chr2 174117053 174117074 -76570780 + (A)n Simple_repeat Simple_repeat 1 21 0 885 198 0 0 chr2 174117091 174117253 -76570601 + AluJb SINE Alu 140 301 -11 1911 146 7 0 chr2 174117384 174117665 -76570189 + AluSx SINE Alu 3 285 -27 1975 134 0 11 chr2 174117766 174118049 -76569805 + AluSx SINE Alu 1 280 -32 2081 110 14 0 chr2 174118097 174118387 -76569467 + AluSx SINE Alu 9 302 -10 1686 156 0 8 chr2 174118721 174118978 -76568876 + MER1B DNA MER1_type 19 273 -66 528 247 149 44 chr2 174118982 174119421 -76568433 + L1MCa LINE L1 1753 5932 -2156 1327 130 29 12 chr2 174119555 174119801 -76568053 + L1MA7 LINE L1 6021 6270 -21 24 32 0 0 chr2 174119807 174119838 -76568016 + AT_rich Low_complexity Low_complexity 1 31 0 2372 73 0 10 chr2 174119889 174120191 -76567663 + AluY SINE Alu 1 299 -12 1754 170 14 0 chr2 174120525 174120808 -76567046 + AluJo SINE Alu 13 299 -13 745 88 97 0 chr2 174121334 174121447 -76566407 - MER85 DNA T2_type -15 124 1 1005 84 15 0 chr2 174122509 174122640 -76565214 - AluSq/x SINE Alu -179 133 1 1184 165 165 31 chr2 174122716 174122971 -76564883 - AluJo SINE Alu -23 289 1 26 0 0 0 chr2 174123023 174123049 -76564805 + AT_rich Low_complexity Low_complexity 1 26 0 24 53 0 0 chr2 174123197 174123235 -76564619 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 174123476 174123498 -76564356 + AT_rich Low_complexity Low_complexity 1 22 0 213 247 206 14 chr2 174123740 174123813 -76564041 + MIR SINE MIR 102 188 -74 2994 137 24 7 chr2 174124411 174125149 -76562705 + L1MA8 LINE L1 4862 5610 -681 * 19846 84 10 16 chr2 174125132 174128011 -76559843 + L1PA7 LINE L1 2370 5231 -915 5035 113 10 13 chr2 174128438 174129268 -76558586 + L1PA7 LINE L1 5327 6153 -1 3419 148 49 24 chr2 174129268 174129768 -76558086 + L1MA8 LINE L1 5595 6129 -162 2303 113 0 0 chr2 174129768 174130078 -76557776 + AluSg SINE Alu 1 310 0 3419 148 49 24 chr2 174130078 174130243 -76557611 + L1MA8 LINE L1 6129 6288 -3 23 0 0 0 chr2 174130597 174130620 -76557234 + AT_rich Low_complexity Low_complexity 1 23 0 1834 152 16 3 chr2 174131161 174131464 -76556390 - AluJo SINE Alu -2 310 4 22 35 0 0 chr2 174131665 174131694 -76556160 + AT_rich Low_complexity Low_complexity 1 29 0 438 259 15 67 chr2 174131976 174132111 -76555743 - MER82 DNA MER2_type -1 652 525 2413 178 118 20 chr2 174132116 174132434 -76555420 + L1MB4 LINE L1 5496 5781 -399 2444 73 3 0 chr2 174132434 174132735 -76555119 + AluY SINE Alu 2 303 -8 2413 178 118 20 chr2 174132735 174132968 -76554886 + L1MB4 LINE L1 5781 6101 -79 920 176 0 0 chr2 174132979 174133121 -76554733 + FRAM SINE Alu 5 146 -30 189 0 0 0 chr2 174133121 174133142 -76554712 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 305 64 0 76 chr2 174133148 174133206 -76554648 + L1MB4 LINE L1 6093 6157 -23 281 287 182 25 chr2 174133439 174133725 -76554129 + L1ME LINE L1 5497 5827 -294 1850 116 67 11 chr2 174133902 174134186 -76553668 - AluSx SINE Alu -12 300 1 1996 226 105 32 chr2 174134234 174134977 -76552877 + L1MC4a LINE L1 5760 6556 -1252 465 169 0 0 chr2 174135124 174135201 -76552653 + MER82 DNA MER2_type 577 653 0 1554 194 77 5 chr2 174135202 174135578 -76552276 - L1MC4 LINE L1 -722 7320 6918 1338 140 14 14 chr2 174135677 174135898 -76551956 + AluJb SINE Alu 81 301 -11 2388 54 10 7 chr2 174136007 174136305 -76551549 - AluY SINE Alu -12 299 1 2363 65 3 3 chr2 174136607 174136897 -76550957 - AluY SINE Alu -21 290 1 891 218 12 0 chr2 174137076 174137241 -76550613 + FAM SINE Alu 1 167 -8 22 0 0 0 chr2 174138216 174138238 -76549616 + AT_rich Low_complexity Low_complexity 1 22 0 2274 110 0 0 chr2 174138494 174138794 -76549060 - AluSg SINE Alu -10 300 1 219 235 59 0 chr2 174138869 174138920 -76548934 + L3 LINE CR1 1518 1571 -6 23 33 0 0 chr2 174139193 174139223 -76548631 + AT_rich Low_complexity Low_complexity 1 30 0 2058 118 10 3 chr2 174139298 174139587 -76548267 - AluSx SINE Alu -21 291 1 1936 124 0 24 chr2 174139591 174139752 -76548102 - AluSx SINE Alu -21 291 139 2174 119 7 0 chr2 174139752 174140054 -76547800 - AluSq SINE Alu -9 304 1 1936 124 0 24 chr2 174140054 174140190 -76547664 - AluSx SINE Alu -173 139 1 2166 106 3 7 chr2 174140211 174140512 -76547342 - AluSg SINE Alu -10 300 1 565 206 48 0 chr2 174140641 174140767 -76547087 + FLAM_C SINE Alu 2 133 0 22 56 0 0 chr2 174141955 174141991 -76545863 + AT_rich Low_complexity Low_complexity 1 36 0 898 297 122 22 chr2 174141991 174142361 -76545493 + L2 LINE L2 2338 2744 -570 234 169 74 155 chr2 174142408 174142494 -76545360 - MER33 DNA MER1_type -2261 324 292 2106 88 7 0 chr2 174142494 174142766 -76545088 + AluSg SINE Alu 1 274 -36 234 169 74 155 chr2 174142766 174142823 -76545031 - MER33 DNA MER1_type -2293 292 232 1184 126 45 31 chr2 174142823 174143046 -76544808 - Tigger4(Zombi) DNA MER2_type 0 2731 2506 289 179 295 0 chr2 174143057 174143135 -76544719 - Tigger4(Zombi) DNA MER2_type -2630 101 1 744 184 69 6 chr2 174143135 174143309 -76544545 - MER33 DNA MER1_type -126 198 14 864 283 81 54 chr2 174143317 174143813 -76544041 + L2 LINE L2 2796 3313 0 186 143 0 0 chr2 174144412 174144447 -76543407 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1013 183 49 0 chr2 174144492 174144698 -76543156 + MER46A DNA MER2_type 3 233 -3 1790 167 10 0 chr2 174144732 174145026 -76542828 + AluJb SINE Alu 1 297 -15 232 255 235 10 chr2 174145283 174145385 -76542469 - MER20B DNA MER1_type -595 188 64 802 247 26 18 chr2 174145925 174146166 -76541688 + L1ME4a LINE L1 5532 5776 -345 267 239 0 0 chr2 174146175 174146305 -76541549 + (TA)n Simple_repeat Simple_repeat 1 130 0 33 43 0 0 chr2 174146320 174146367 -76541487 + AT_rich Low_complexity Low_complexity 1 47 0 2337 88 0 3 chr2 174146514 174146821 -76541033 + AluY SINE Alu 1 306 -5 1693 161 8 0 chr2 174146840 174147101 -76540753 + AluJb SINE Alu 35 297 -15 772 164 91 209 chr2 174147107 174147211 -76540643 + AluJo SINE Alu 3 118 -184 222 37 0 0 chr2 174147211 174147238 -76540616 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 772 164 91 209 chr2 174147238 174147291 -76540563 + AluJo SINE Alu 118 176 -126 2177 135 3 3 chr2 174147291 174147603 -76540251 + AluSx SINE Alu 1 312 0 772 164 91 209 chr2 174147603 174147774 -76540080 + AluJo SINE Alu 176 293 -9 22 35 0 0 chr2 174147906 174147935 -76539919 + AT_rich Low_complexity Low_complexity 1 29 0 960 133 13 0 chr2 174147938 174148088 -76539766 + L1MA3 LINE L1 5629 5780 -525 2103 129 0 7 chr2 174148088 174148383 -76539471 + AluSx SINE Alu 1 293 -19 2154 103 7 13 chr2 174148685 174148986 -76538868 + AluSx SINE Alu 1 299 -13 2437 70 3 3 chr2 174148986 174149298 -76538556 + AluSp SINE Alu 1 312 -1 3297 116 37 14 chr2 174149299 174149816 -76538038 + L1MA3 LINE L1 5777 6305 0 1983 110 33 0 chr2 174149870 174150167 -76537687 + AluSx SINE Alu 1 306 0 2063 119 33 10 chr2 174150169 174150471 -76537383 + AluSx SINE Alu 2 310 -2 309 292 168 0 chr2 174150530 174150732 -76537122 + L1ME4a LINE L1 5874 6109 -12 284 313 118 19 chr2 174150819 174151030 -76536824 + L1ME LINE L1 5512 5743 -378 2348 62 16 33 chr2 174151134 174151438 -76536416 + AluY SINE Alu 1 299 -12 1854 120 0 4 chr2 174151628 174151914 -76535940 + AluSq SINE Alu 36 320 0 785 160 0 16 chr2 174152356 174152481 -76535373 + FLAM_C SINE Alu 8 130 -13 2582 62 0 0 chr2 174152485 174152794 -76535060 + AluY SINE Alu 1 309 -2 1297 158 14 9 chr2 174152945 174153166 -76534688 + AluJo SINE Alu 83 304 -8 1068 161 65 15 chr2 174154069 174154268 -76533586 - AluJo SINE Alu -18 294 86 2300 69 0 10 chr2 174154426 174154729 -76533125 - AluY SINE Alu -11 300 1 2231 89 3 49 chr2 174154936 174155261 -76532593 - AluSp SINE Alu -1 312 3 2320 80 13 0 chr2 174156106 174156408 -76531446 - AluSp SINE Alu -7 306 1 2365 66 0 35 chr2 174156899 174157216 -76530638 - AluSp SINE Alu -7 306 1 21 36 0 0 chr2 174157226 174157254 -76530600 + AT_rich Low_complexity Low_complexity 1 28 0 2177 122 0 0 chr2 174157552 174157846 -76530008 + AluSg SINE Alu 3 296 -14 2115 126 3 0 chr2 174157863 174158165 -76529689 + AluSx SINE Alu 7 309 -3 189 186 0 93 chr2 174158691 174158734 -76529120 - MIR SINE MIR -64 144 106 2446 63 7 0 chr2 174159531 174159830 -76528024 + AluY SINE Alu 1 301 -10 253 306 148 28 chr2 174161125 174161233 -76526621 - MIR SINE MIR -67 141 21 22 0 0 0 chr2 174161247 174161269 -76526585 + AT_rich Low_complexity Low_complexity 1 22 0 1164 69 0 7 chr2 174161730 174161874 -76525980 - AluSp SINE Alu -170 143 1 5884 101 10 1 chr2 174161875 174162687 -76525167 + L1PA13 LINE L1 5343 6161 -2 223 218 18 0 chr2 174162756 174162811 -76525043 + (TA)n Simple_repeat Simple_repeat 1 56 0 245 261 0 0 chr2 174162812 174162877 -76524977 - L1MC4 LINE L1 -1342 6700 6636 370 151 54 15 chr2 174162879 174162955 -76524899 + MLT1G1 LTR MaLR 480 595 0 864 189 0 0 chr2 174163018 174163150 -76524704 - FLAM_A SINE Alu 0 133 2 229 86 114 0 chr2 174163332 174163367 -76524487 - MLT1F LTR MaLR -41 501 463 2187 104 0 0 chr2 174163392 174163728 -76524126 + AluSg SINE Alu 1 336 0 445 287 25 32 chr2 174163858 174164015 -76523839 + MLT1J2 LTR MaLR 283 438 -12 523 198 47 0 chr2 174164284 174164390 -76523464 + MER90 LTR ERV1 117 227 -348 2543 76 0 0 chr2 174164390 174164692 -76523162 + AluY SINE Alu 1 302 -9 1272 185 5 0 chr2 174164805 174165010 -76522844 - AluSx SINE Alu -106 206 1 564 224 82 14 chr2 174165010 174165157 -76522697 + MER90 LTR ERV1 457 613 -1 1149 117 22 72 chr2 174165309 174165532 -76522322 + L1MB8 LINE L1 5967 6178 0 2159 104 0 36 chr2 174166268 174166576 -76521278 - AluSx SINE Alu -15 297 1 2195 116 0 10 chr2 174166678 174166980 -76520874 - AluSg SINE Alu -11 299 1 189 107 0 0 chr2 174167567 174167595 -76520259 + (T)n Simple_repeat Simple_repeat 1 28 0 2038 145 0 0 chr2 174167689 174167986 -76519868 + AluSx SINE Alu 1 297 -15 1885 157 0 7 chr2 174168367 174168672 -76519182 + AluJb SINE Alu 1 303 -9 10361 40 17 98 chr2 174168759 174170267 -76517587 + SVA Other Other 1 1386 0 549 241 94 0 chr2 174170482 174170685 -76517169 + MER5C DNA MER1_type 36 257 -67 194 200 91 36 chr2 174171349 174171404 -76516450 - MIR SINE MIR -154 108 51 269 283 172 11 chr2 174171678 174171872 -76515982 + MIR SINE MIR 38 261 -1 186 103 0 0 chr2 174172234 174172263 -76515591 + (TA)n Simple_repeat Simple_repeat 1 29 0 2276 82 23 3 chr2 174173200 174173503 -76514351 - AluY SINE Alu -2 309 1 756 98 0 0 chr2 174173566 174173683 -76514171 - AluSc SINE Alu 0 303 187 2151 133 0 0 chr2 174173809 174174110 -76513744 + AluSx SINE Alu 1 301 -11 222 245 0 0 chr2 174174424 174174473 -76513381 + A-rich Low_complexity Low_complexity 1 49 0 2202 118 0 0 chr2 174174917 174175214 -76512640 - AluSx SINE Alu -12 300 4 2279 95 0 3 chr2 174175773 174176067 -76511787 - AluSg1 SINE Alu -16 293 1 857 165 0 8 chr2 174176072 174176272 -76511582 - FLAM_C SINE Alu 0 200 2 2252 106 3 0 chr2 174177656 174177948 -76509906 - AluSg SINE Alu -17 293 1 1554 176 4 0 chr2 174178059 174178314 -76509540 - AluJb SINE Alu -18 294 39 711 208 71 12 chr2 174178327 174178540 -76509314 - L1MD3 LINE L1 0 7995 7713 424 194 15 0 chr2 174178548 174178615 -76509239 + AluSc SINE Alu 118 185 -124 7461 84 24 11 chr2 174178617 174179221 -76508633 + L1MA1 LINE L1 5168 5762 -540 2662 51 0 0 chr2 174179221 174179532 -76508322 + AluY SINE Alu 1 311 0 2381 69 16 3 chr2 174179532 174179835 -76508019 + AluSp SINE Alu 1 307 -6 7461 84 24 11 chr2 174179835 174180343 -76507511 + L1MA1 LINE L1 5761 6296 -6 28 0 0 0 chr2 174180343 174180371 -76507483 + AT_rich Low_complexity Low_complexity 1 28 0 490 204 0 0 chr2 174180371 174180459 -76507395 + FLAM_A SINE Alu 45 132 -10 301 287 103 29 chr2 174180469 174180605 -76507249 - L1MC5 LINE L1 -308 7653 7508 922 242 206 12 chr2 174180610 174181028 -76506826 - L1ME3A LINE L1 0 6170 5672 26 98 0 0 chr2 174181294 174181376 -76506478 + AT_rich Low_complexity Low_complexity 1 82 0 376 294 90 9 chr2 174181608 174181760 -76506094 + MIR SINE MIR 46 209 -53 940 191 53 36 chr2 174181771 174182122 -76505732 - LTR40b LTR ERVL 0 462 60 2190 122 3 3 chr2 174182248 174182560 -76505294 + AluSx SINE Alu 1 312 0 354 105 0 76 chr2 174182608 174183098 -76504756 + (TAAA)n Simple_repeat Simple_repeat 1 452 0 268 186 69 0 chr2 174183102 174183204 -76504650 + (TTAA)n Simple_repeat Simple_repeat 2 110 0 827 104 128 0 chr2 174183553 174183678 -76504176 - AluSg/x SINE Alu -14 298 158 1539 177 50 7 chr2 174184898 174185197 -76502657 + AluJb SINE Alu 1 312 0 2271 88 7 0 chr2 174185343 174185639 -76502215 + AluSp SINE Alu 1 298 -15 1926 102 10 69 chr2 174185727 174185865 -76501989 + AluSx SINE Alu 1 113 -199 2403 93 0 3 chr2 174185865 174186176 -76501678 + AluSq SINE Alu 1 310 -3 1926 102 10 69 chr2 174186176 174186341 -76501513 + AluSx SINE Alu 113 286 -26 1419 120 176 19 chr2 174187580 174187760 -76500094 - AluSg SINE Alu -1 309 159 279 0 0 0 chr2 174187760 174187791 -76500063 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2032 106 0 11 chr2 174187791 174188073 -76499781 - AluSx SINE Alu -28 284 6 1419 120 176 19 chr2 174188073 174188158 -76499696 - AluSg SINE Alu -150 160 1 1795 146 4 0 chr2 174188159 174188434 -76499420 - AluJb SINE Alu -6 306 31 222 195 0 0 chr2 174188547 174188588 -76499266 + T-rich Low_complexity Low_complexity 3 43 0 528 181 0 0 chr2 174188590 174188673 -76499181 - AluJo SINE Alu -176 136 54 264 346 67 19 chr2 174189228 174189332 -76498522 + L2 LINE L2 3163 3271 -1 2250 132 0 0 chr2 174189926 174190236 -76497618 - AluSx SINE Alu -1 311 2 1329 122 43 154 chr2 174190304 174190649 -76497205 - AluJo SINE Alu -1 311 5 2381 70 0 17 chr2 174190673 174190975 -76496879 - AluY SINE Alu -14 297 1 216 0 0 0 chr2 174191321 174191345 -76496509 + (T)n Simple_repeat Simple_repeat 1 24 0 23 54 0 0 chr2 174191351 174191388 -76496466 + AT_rich Low_complexity Low_complexity 1 37 0 2035 135 16 0 chr2 174191388 174191692 -76496162 - AluSx SINE Alu -3 309 1 2635 143 10 55 chr2 174191714 174192209 -76495645 - L1PB3 LINE L1 -6 6148 5676 1606 207 118 40 chr2 174192703 174192809 -76495045 - L1ME3A LINE L1 -160 6010 5914 1878 157 14 0 chr2 174192809 174193102 -76494752 - AluJb SINE Alu -15 297 1 1606 207 118 40 chr2 174193102 174193497 -76494357 - L1ME3A LINE L1 -256 5914 5470 816 255 120 46 chr2 174193839 174193875 -76493979 - L1ME4a LINE L1 -31 6090 6058 1579 193 0 0 chr2 174193875 174194145 -76493709 + AluJo SINE Alu 38 307 -5 816 255 120 46 chr2 174194145 174194449 -76493405 - L1ME4a LINE L1 -63 6058 5778 706 147 15 88 chr2 174194449 174194585 -76493269 + FLAM_A SINE Alu 5 130 -3 816 255 120 46 chr2 174194585 174194808 -76493046 - L1ME4a LINE L1 -343 5778 5484 32 0 0 23 chr2 174194831 174194850 -76493004 + AT_rich Low_complexity Low_complexity 1 19 -23 1783 164 3 7 chr2 174194850 174195143 -76492711 + AluJo SINE Alu 1 292 -20 32 0 0 23 chr2 174195143 174195166 -76492688 + AT_rich Low_complexity Low_complexity 19 42 0 2317 69 13 28 chr2 174195183 174195501 -76492353 - AluSp SINE Alu 0 313 1 2424 55 0 10 chr2 174195511 174195801 -76492053 - AluY SINE Alu -24 287 1 2315 98 3 3 chr2 174195857 174196164 -76491690 - AluSx SINE Alu -5 307 1 23 33 0 0 chr2 174196174 174196204 -76491650 + AT_rich Low_complexity Low_complexity 1 30 0 288 120 0 0 chr2 174196568 174196618 -76491236 + (T)n Simple_repeat Simple_repeat 1 50 0 1979 93 51 55 chr2 174196697 174197008 -76490846 - AluSg SINE Alu 0 310 1 2978 159 87 25 chr2 174197047 174197819 -76490035 + MER21A LTR ERV1 6 931 0 898 167 19 12 chr2 174198528 174198690 -76489164 + FRAM SINE Alu 1 163 -13 739 161 0 0 chr2 174199400 174199518 -76488336 - FLAM_C SINE Alu -25 118 1 2120 127 0 3 chr2 174200026 174200333 -76487521 - AluSx SINE Alu -6 306 1 613 307 98 14 chr2 174200353 174200793 -76487061 - L1MC4 LINE L1 0 8042 7566 2432 75 3 0 chr2 174201147 174201439 -76486415 - AluSp SINE Alu -20 293 1 380 303 54 11 chr2 174201479 174201734 -76486120 - L1MC5 LINE L1 -466 7495 7264 775 143 8 0 chr2 174201918 174202037 -76485817 - FLAM_C SINE Alu -13 120 1 1177 261 41 37 chr2 174202350 174202809 -76485045 - L2 LINE L2 -40 3273 2813 183 129 0 0 chr2 174203097 174203128 -76484726 + (TATATG)n Simple_repeat Simple_repeat 6 36 0 613 299 109 0 chr2 174203813 174204024 -76483830 + MIR SINE MIR 8 241 -21 416 260 79 66 chr2 174204108 174204335 -76483519 - L1ME3A LINE L1 0 6170 5941 451 204 63 63 chr2 174204665 174204841 -76483013 - L1ME4a LINE L1 -2 6119 5941 1842 157 17 0 chr2 174204841 174205135 -76482719 - AluJo SINE Alu -13 299 1 451 204 63 63 chr2 174205135 174205149 -76482705 - L1ME4a LINE L1 -179 5942 5929 887 134 39 0 chr2 174205165 174205292 -76482562 - AluJo SINE Alu -178 134 3 2039 149 0 13 chr2 174205320 174205636 -76482218 - AluSx SINE Alu 0 312 1 301 237 74 67 chr2 174205670 174205805 -76482049 - L1ME4a LINE L1 -263 5903 5768 2260 103 7 0 chr2 174205924 174206225 -76481629 - AluSp SINE Alu -10 303 1 2381 78 3 10 chr2 174206936 174207244 -76480610 + AluSp SINE Alu 3 308 -5 22 0 0 0 chr2 174207256 174207278 -76480576 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 174207607 174207628 -76480226 + AT_rich Low_complexity Low_complexity 1 21 0 634 319 191 24 chr2 174207793 174208332 -76479522 + L3 LINE CR1 577 1205 -372 540 178 164 20 chr2 174208345 174208497 -76479357 + MIR SINE MIR 89 262 0 828 88 48 40 chr2 174208501 174208626 -76479228 - FLAM_C SINE Alu -7 126 1 361 273 303 8 chr2 174208655 174208919 -76478935 + L3 LINE CR1 1201 1542 -35 682 182 130 39 chr2 174209010 174209132 -76478722 + AluJo SINE Alu 1 141 -171 416 19 19 0 chr2 174209132 174209185 -76478669 + (TAAA)n Simple_repeat Simple_repeat 1 54 0 682 182 130 39 chr2 174209185 174209216 -76478638 + AluJo SINE Alu 141 168 -144 1178 171 44 0 chr2 174209218 174209453 -76478401 + AluJo SINE Alu 69 312 0 680 188 0 8 chr2 174209466 174209583 -76478271 + FLAM_C SINE Alu 2 117 -16 1432 199 21 78 chr2 174209796 174209865 -76477989 - MLT1A1 LTR MaLR 0 365 294 2407 78 10 0 chr2 174209865 174210173 -76477681 + AluSx SINE Alu 1 311 -1 1432 199 21 78 chr2 174210173 174210408 -76477446 - MLT1A1 LTR MaLR -71 294 85 2075 133 0 40 chr2 174210408 174210730 -76477124 - AluJb SINE Alu -3 309 1 1432 199 21 78 chr2 174210730 174210811 -76477043 - MLT1A1 LTR MaLR -280 85 1 301 286 67 19 chr2 174210816 174210921 -76476933 - L1ME4a LINE L1 -247 5874 5765 657 291 68 38 chr2 174210997 174211234 -76476620 - MIR SINE MIR -14 248 5 226 180 10 70 chr2 174211324 174211424 -76476430 - L1MC5 LINE L1 -229 7732 7639 305 165 28 197 chr2 174211951 174212169 -76475685 - L1MC5 LINE L1 -532 7429 7249 1529 153 85 27 chr2 174212191 174212485 -76475369 - AluJb SINE Alu -1 311 1 962 199 62 24 chr2 174212563 174212831 -76475023 - L1MC4 LINE L1 -728 7233 6972 23 0 0 0 chr2 174214128 174214151 -76473703 + AT_rich Low_complexity Low_complexity 1 23 0 929 154 40 0 chr2 174214177 174214326 -76473528 + AluJb SINE Alu 148 302 -10 3910 250 85 24 chr2 174214869 174216016 -76471838 - L2 LINE L2 -363 2951 1736 188 150 25 50 chr2 174216085 174216125 -76471729 - L2 LINE L2 -3 3269 3231 1543 142 69 40 chr2 174216852 174217127 -76470727 - MER1B DNA MER1_type 0 339 57 712 82 90 8 chr2 174217246 174217368 -76470486 - L1MB7 LINE L1 -16 6168 6037 25 0 0 0 chr2 174218281 174218306 -76469548 + AT_rich Low_complexity Low_complexity 1 25 0 222 303 76 0 chr2 174219445 174219511 -76468343 + L2 LINE L2 3190 3260 -12 1951 118 90 0 chr2 174219925 174220204 -76467650 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr2 174220237 174220260 -76467594 + AT_rich Low_complexity Low_complexity 1 23 0 855 222 23 12 chr2 174220731 174220902 -76466952 - MER5A DNA MER1_type 0 189 17 883 181 30 0 chr2 174220916 174221082 -76466772 - MER5B DNA MER1_type -4 174 4 746 247 6 6 chr2 174221173 174221351 -76466503 + MER5B DNA MER1_type 1 178 0 690 226 5 68 chr2 174221560 174221600 -76466254 - MER5B DNA MER1_type 0 178 137 2363 99 0 6 chr2 174221600 174221914 -76465940 + AluSx SINE Alu 1 312 0 690 226 5 68 chr2 174221914 174222063 -76465791 - MER5B DNA MER1_type -41 137 1 188 240 280 13 chr2 174222518 174222593 -76465261 - MER5A DNA MER1_type -11 178 84 455 113 75 0 chr2 174222599 174222679 -76465175 - AluS SINE Alu -1 309 224 2239 102 20 0 chr2 174222931 174223235 -76464619 + AluSx SINE Alu 1 310 -2 2027 118 0 0 chr2 174223427 174223698 -76464156 + AluSx SINE Alu 22 292 -20 197 200 36 0 chr2 174223829 174223884 -76463970 + GA-rich Low_complexity Low_complexity 5 61 0 2910 137 11 35 chr2 174224321 174224861 -76462993 + L1MB7 LINE L1 5639 6165 -19 2469 37 0 74 chr2 174224988 174225314 -76462540 + AluY SINE Alu 2 303 -8 1431 129 0 5 chr2 174225328 174225530 -76462324 + AluSc SINE Alu 1 201 -108 609 102 54 0 chr2 174225633 174225799 -76462055 + (TA)n Simple_repeat Simple_repeat 2 176 0 36 0 0 0 chr2 174225799 174225835 -76462019 + AT_rich Low_complexity Low_complexity 1 36 0 631 83 65 0 chr2 174225837 174226006 -76461848 + (TA)n Simple_repeat Simple_repeat 1 180 0 2072 136 0 0 chr2 174226006 174226293 -76461561 - AluSx SINE Alu -25 287 1 25 0 0 0 chr2 174226979 174227004 -76460850 + AT_rich Low_complexity Low_complexity 1 25 0 4680 121 39 42 chr2 174227280 174227584 -76460270 + L1MA10 LINE L1 5477 5781 -553 1718 151 101 3 chr2 174227584 174227901 -76459953 - MER7A DNA MER2_type 0 346 1 4680 121 39 42 chr2 174227901 174228238 -76459616 + L1MA10 LINE L1 5781 6117 -217 782 197 0 0 chr2 174228238 174228365 -76459489 + FLAM_A SINE Alu 1 127 -6 4680 121 39 42 chr2 174228365 174228572 -76459282 + L1MA10 LINE L1 6117 6323 -11 976 228 29 29 chr2 174228851 174229132 -76458722 + L1M4 LINE L1 3767 4047 -2099 1679 104 4 0 chr2 174229132 174229362 -76458492 + AluSp SINE Alu 82 312 -1 1416 216 19 0 chr2 174229391 174229655 -76458199 + MLT1E LTR MaLR 325 593 0 905 158 0 7 chr2 174229662 174229808 -76458046 + FRAM SINE Alu 1 145 -31 553 221 73 117 chr2 174229985 174230405 -76457449 + MLT1E1-int LTR MaLR 1064 1367 -4 1223 204 145 51 chr2 174230409 174230956 -76456898 + MLT1E1 LTR MaLR 1 608 -16 2017 131 0 26 chr2 174231082 174231388 -76456466 + AluSx SINE Alu 5 302 -10 2557 156 25 29 chr2 174231388 174231902 -76455952 - L1MC2 LINE L1 -19 6325 5814 821 131 19 38 chr2 174231902 174232053 -76455801 - L1PA16 LINE L1 0 6166 6010 858 188 17 92 chr2 174232068 174232103 -76455751 - L1ME2 LINE L1 -11 6153 6117 2606 11 0 0 chr2 174232103 174232428 -76455426 - AluY SINE Alu 0 325 1 858 188 17 92 chr2 174232428 174232631 -76455223 - L1ME2 LINE L1 -47 6117 5932 1457 156 39 102 chr2 174232666 174233076 -76454778 - L1ME2 LINE L1 -216 5950 5567 283 281 0 0 chr2 174233076 174233140 -76454714 + L2 LINE L2 3250 3313 0 755 169 18 82 chr2 174233361 174233466 -76454388 + L1MA4 LINE L1 6023 6108 -192 727 178 0 30 chr2 174233466 174233601 -76454253 - FLAM_C SINE Alu -2 131 1 755 169 18 82 chr2 174233601 174233714 -76454140 + L1MA4 LINE L1 6108 6227 -73 415 296 17 17 chr2 174233850 174233965 -76453889 - L2 LINE L2 -15 3298 3184 21 57 0 0 chr2 174234121 174234156 -76453698 + AT_rich Low_complexity Low_complexity 1 35 0 1056 203 24 28 chr2 174234430 174234642 -76453212 - MER21B LTR ERV1 -555 308 98 442 245 0 20 chr2 174234681 174234779 -76453075 - MER21B LTR ERV1 -767 96 1 8727 231 47 33 chr2 174234779 174235331 -76452523 - L1MD2 LINE L1 -456 5903 5360 1680 167 3 39 chr2 174235331 174235643 -76452211 - AluJo SINE Alu -11 301 1 8727 231 47 33 chr2 174235643 174236234 -76451620 - L1MD2 LINE L1 -999 5360 4779 747 0 0 0 chr2 174236234 174236320 -76451534 - L1PA3 LINE L1 -3 6152 6067 8727 231 47 33 chr2 174236320 174237526 -76450328 - L1MD2 LINE L1 -1580 4779 3592 2436 74 0 0 chr2 174237526 174237823 -76450031 - AluY SINE Alu -2 309 13 8727 231 47 33 chr2 174237823 174238963 -76448891 - L1MD2 LINE L1 -2767 3592 2356 2444 78 0 0 chr2 174239086 174239380 -76448474 + AluSc SINE Alu 1 294 -15 652 228 0 0 chr2 174239474 174239597 -76448257 + FLAM_A SINE Alu 1 123 -10 25 65 0 0 chr2 174239598 174239644 -76448210 + AT_rich Low_complexity Low_complexity 1 46 0 188 388 12 12 chr2 174240119 174240199 -76447655 - L2 LINE L2 -45 3268 3189 283 323 105 8 chr2 174240346 174240479 -76447375 - MIR SINE MIR -115 147 2 21 36 0 0 chr2 174240737 174240765 -76447089 + AT_rich Low_complexity Low_complexity 1 28 0 858 133 0 22 chr2 174241311 174241446 -76446408 + FLAM_C SINE Alu 1 132 -1 328 266 112 77 chr2 174241891 174242034 -76445820 - L2 LINE L2 0 3272 3125 1471 190 53 11 chr2 174242533 174242817 -76445037 - AluJb SINE Alu -14 298 3 45 34 0 0 chr2 174243261 174243320 -76444534 + AT_rich Low_complexity Low_complexity 1 59 0 1020 92 0 0 chr2 174243334 174243464 -76444390 + AluY SINE Alu 5 134 -177 2632 27 0 0 chr2 174243464 174243757 -76444097 + AluYa5 SINE Alu 1 293 -18 1586 178 7 14 chr2 174243916 174244191 -76443663 + AluJo SINE Alu 3 275 -37 668 272 46 2 chr2 174244809 174245004 -76442850 - MIR SINE MIR -38 224 28 386 264 108 116 chr2 174245286 174245412 -76442442 - MIR SINE MIR -12 250 125 2299 55 41 7 chr2 174245412 174245705 -76442149 + AluY SINE Alu 1 303 -8 386 264 108 116 chr2 174245705 174245828 -76442026 - MIR SINE MIR -137 125 3 350 217 66 81 chr2 174246034 174246232 -76441622 + L1MC5 LINE L1 7731 7925 -36 271 197 131 0 chr2 174247978 174248039 -76439815 + L2 LINE L2 2310 2378 -936 237 304 261 0 chr2 174248216 174248308 -76439546 + MIR SINE MIR 17 132 -76 1387 168 18 95 chr2 174248320 174248647 -76439207 + AluJo SINE Alu 1 302 -10 447 283 199 29 chr2 174248804 174249080 -76438774 + L2 LINE L2 2988 3310 -3 626 267 43 0 chr2 174249080 174249241 -76438613 - MIR SINE MIR -16 246 79 310 203 13 13 chr2 174249296 174249375 -76438479 + MER116 DNA Mariner 2 80 0 776 208 0 14 chr2 174250255 174250399 -76437455 + FLAM_C SINE Alu 2 143 0 27 62 0 0 chr2 174250478 174250526 -76437328 + AT_rich Low_complexity Low_complexity 1 48 0 201 250 0 0 chr2 174250848 174250892 -76436962 + T-rich Low_complexity Low_complexity 4 47 0 1086 286 114 24 chr2 174251292 174251747 -76436107 + MER21B LTR ERV1 317 812 -51 943 261 12 12 chr2 174251761 174252014 -76435840 + L1ME1 LINE L1 5896 6148 -18 1412 292 119 37 chr2 174252035 174252658 -76435196 + L3 LINE CR1 903 1576 -1 555 217 217 0 chr2 174253645 174253829 -76434025 + L1ME3A LINE L1 5939 6162 -8 2370 82 0 28 chr2 174253853 174254172 -76433682 + AluSq SINE Alu 1 310 -3 246 233 137 41 chr2 174254557 174254703 -76433151 + L1ME4a LINE L1 5945 6104 -17 2206 110 7 7 chr2 174254731 174255040 -76432814 - AluSg SINE Alu -1 309 1 879 224 25 0 chr2 174255110 174255311 -76432543 - L1M4 LINE L1 -869 5277 5072 340 278 21 10 chr2 174255372 174255469 -76432385 - MIR SINE MIR -108 154 57 197 95 0 48 chr2 174255534 174255576 -76432278 + (TTTTC)n Simple_repeat Simple_repeat 2 41 0 1925 98 3 71 chr2 174255590 174255885 -76431969 + AluSx SINE Alu 1 275 -37 307 77 0 0 chr2 174255886 174255925 -76431929 - Alu SINE Alu -260 39 1 189 0 0 0 chr2 174256611 174256632 -76431222 + (A)n Simple_repeat Simple_repeat 1 21 0 1611 179 11 7 chr2 174256632 174256917 -76430937 + AluJo SINE Alu 1 286 -26 44793 42 1 1 chr2 174256938 174263091 -76424763 + L1PA4 LINE L1 1 6155 0 248 254 0 0 chr2 174263252 174263307 -76424547 - L2 LINE L2 0 3313 3259 1349 175 18 43 chr2 174263636 174263916 -76423938 - L1MB7 LINE L1 -8 6176 5904 1450 146 46 68 chr2 174263929 174264233 -76423621 - AluJo SINE Alu 0 306 9 186 43 0 0 chr2 174264814 174264837 -76423017 + (A)n Simple_repeat Simple_repeat 1 23 0 2258 95 17 0 chr2 174264927 174265222 -76422632 + AluSx SINE Alu 1 300 -12 523 308 0 8 chr2 174266062 174266192 -76421662 - MER5B DNA MER1_type -9 169 41 1265 191 120 39 chr2 174266481 174266791 -76421063 - MLT1A1 LTR MaLR 0 593 25 264 266 0 16 chr2 174267153 174267217 -76420637 - L2 LINE L2 -9 3263 3201 426 85 0 0 chr2 174268036 174268095 -76419759 + (CA)n Simple_repeat Simple_repeat 2 60 0 1297 124 0 11 chr2 174269184 174269361 -76418493 - AluSx SINE Alu -137 175 1 972 211 0 29 chr2 174269384 174269555 -76418299 + FRAM SINE Alu 1 166 0 3051 112 148 17 chr2 174269900 174270366 -76417488 + MER1A DNA MER1_type 1 527 0 36 77 0 0 chr2 174270829 174270907 -76416947 + AT_rich Low_complexity Low_complexity 1 78 0 22 0 0 0 chr2 174271294 174271316 -76416538 + AT_rich Low_complexity Low_complexity 1 22 0 272 228 114 32 chr2 174272139 174272262 -76415592 - MER103 DNA DNA -13 153 21 246 218 205 13 chr2 174272537 174272615 -76415239 - LTR33 LTR ERVL -4 517 425 666 235 119 21 chr2 174272650 174272893 -76414961 - LTR33 LTR ERVL -254 267 1 407 259 42 74 chr2 174273094 174273283 -76414571 + MIR SINE MIR 77 259 -3 22 0 0 0 chr2 174273716 174273738 -76414116 + AT_rich Low_complexity Low_complexity 1 22 0 1750 172 3 3 chr2 174274154 174274439 -76413415 - AluJo SINE Alu -27 285 1 639 129 0 0 chr2 174275084 174275169 -76412685 + AluS SINE Alu 1 85 -227 188 343 28 45 chr2 174276596 174276774 -76411080 - L2 LINE L2 -421 2893 2719 181 372 93 11 chr2 174276938 174277121 -76410733 + L2 LINE L2 2659 2856 -458 196 370 37 0 chr2 174277181 174277262 -76410592 + L2 LINE L2 2942 3025 -247 2639 42 13 0 chr2 174277563 174277869 -76409985 + AluSp SINE Alu 2 311 -2 275 319 22 51 chr2 174278431 174278569 -76409285 - MIR SINE MIR -55 153 20 1569 139 0 66 chr2 174279322 174279609 -76408245 + AluJo SINE Alu 1 268 -44 4081 131 3 35 chr2 174279610 174280230 -76407624 - LTR26 LTR ERV1 -3 600 1 313 293 119 30 chr2 174280315 174280453 -76407401 + L2 LINE L2 2872 2996 -276 2306 73 3 0 chr2 174280453 174280742 -76407112 + AluSq SINE Alu 1 290 -23 216 67 0 0 chr2 174280742 174280772 -76407082 + (CAAAT)n Simple_repeat Simple_repeat 2 31 0 313 293 119 30 chr2 174280772 174280923 -76406931 + L2 LINE L2 2995 3271 -1 627 153 81 0 chr2 174280982 174281093 -76406761 + Charlie1 DNA MER1_type 46 165 -2596 279 0 0 0 chr2 174281095 174281126 -76406728 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1333 193 91 0 chr2 174281129 174281265 -76406589 - AluJo SINE Alu -33 279 157 186 43 0 0 chr2 174281265 174281288 -76406566 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1333 193 91 0 chr2 174281288 174281405 -76406449 - AluJo SINE Alu -155 157 3 804 182 86 7 chr2 174281412 174281704 -76406150 + Charlie1 DNA MER1_type 2421 2759 -2 758 239 38 16 chr2 174281861 174282045 -76405809 + MLT1E LTR MaLR 51 238 -355 1326 100 0 0 chr2 174282045 174282215 -76405639 + AluSq SINE Alu 1 170 -143 499 141 0 0 chr2 174282315 174282386 -76405468 + AluS SINE Alu 222 292 -17 1195 167 39 143 chr2 174282398 174282512 -76405342 + AluJo SINE Alu 1 125 -177 474 18 0 0 chr2 174282512 174282567 -76405287 + (CA)n Simple_repeat Simple_repeat 1 55 0 1195 167 39 143 chr2 174282567 174282633 -76405221 + AluJo SINE Alu 125 196 -106 513 0 0 0 chr2 174282633 174282690 -76405164 + (CA)n Simple_repeat Simple_repeat 2 58 0 1195 167 39 143 chr2 174282690 174282843 -76405011 + AluJo SINE Alu 196 300 -2 1141 71 0 7 chr2 174282949 174283090 -76404764 + AluSq/x SINE Alu 1 140 -173 22 35 0 0 chr2 174283090 174283119 -76404735 + AT_rich Low_complexity Low_complexity 1 29 0 428 89 0 0 chr2 174283135 174283191 -76404663 + Alu SINE Alu 244 299 -13 522 246 133 38 chr2 174283196 174283460 -76404394 - L1ME4a LINE L1 -38 6083 5795 24 32 0 0 chr2 174283679 174283710 -76404144 + AT_rich Low_complexity Low_complexity 1 31 0 1677 145 35 42 chr2 174283863 174284152 -76403702 + AluJo SINE Alu 1 287 -25 1752 154 0 4 chr2 174285250 174285522 -76402332 - AluSx SINE Alu -41 271 1 2167 98 34 0 chr2 174285807 174286103 -76401751 - AluSp SINE Alu -7 306 1 2439 88 3 0 chr2 174287510 174287817 -76400037 + AluSp SINE Alu 1 308 -5 25 0 0 0 chr2 174288890 174288915 -76398939 + AT_rich Low_complexity Low_complexity 1 25 0 640 279 113 9 chr2 174289437 174289659 -76398195 - MIR SINE MIR 0 262 18 263 255 75 19 chr2 174289814 174289920 -76397934 + MIR3 SINE MIR 97 208 0 809 135 0 23 chr2 174291493 174291626 -76396228 + FLAM_C SINE Alu 1 130 -13 29 28 0 0 chr2 174293764 174293800 -76394054 + AT_rich Low_complexity Low_complexity 1 36 0 2322 94 0 0 chr2 174294260 174294557 -76393297 - AluSg SINE Alu -13 297 1 234 186 186 69 chr2 174294667 174294769 -76393085 + L2 LINE L2 3200 3313 0 1909 126 22 4 chr2 174295781 174296079 -76391775 - AluSx SINE Alu 0 303 1 22 80 0 0 chr2 174296308 174296358 -76391496 + AT_rich Low_complexity Low_complexity 1 50 0 3383 92 9 51 chr2 174296374 174297004 -76390850 - SVA Other Other -350 1036 433 5373 92 23 10 chr2 174297059 174297839 -76390015 - SVA Other Other -518 868 79 2101 139 3 0 chr2 174499712 174500014 -76187840 + AluSx SINE Alu 1 303 -9 479 250 58 6 chr2 174500070 174500226 -76187628 + L1MC4a LINE L1 7195 7358 -450 519 187 12 15 chr2 174500228 174500414 -76187440 + MER8 DNA MER2_type 1 239 0 519 228 142 80 chr2 174500421 174500724 -76187130 + L1MC4 LINE L1 7272 7555 -487 1659 176 24 7 chr2 174500724 174501014 -76186840 - AluJo SINE Alu -15 297 3 519 228 142 80 chr2 174501014 174501128 -76186726 + L1MC4 LINE L1 7555 7660 -382 213 39 0 0 chr2 174501128 174501154 -76186700 + (TA)n Simple_repeat Simple_repeat 2 27 0 519 228 142 80 chr2 174501154 174501271 -76186583 + L1MC4 LINE L1 7660 7952 -90 195 114 0 0 chr2 174501829 174501864 -76185990 + (T)n Simple_repeat Simple_repeat 1 35 0 766 274 119 69 chr2 174501903 174501996 -76185858 - L1ME3A LINE L1 -9 6161 6074 2344 57 0 0 chr2 174501996 174502314 -76185540 - AluY SINE Alu 0 318 1 766 274 119 69 chr2 174502314 174502497 -76185357 - L1ME3A LINE L1 -96 6074 5902 1783 180 7 0 chr2 174502497 174502792 -76185062 - AluJo SINE Alu -9 303 7 766 274 119 69 chr2 174502792 174502886 -76184968 - L1ME3A LINE L1 -268 5902 5814 2545 66 0 0 chr2 174502886 174503187 -76184667 + AluY SINE Alu 1 301 -10 766 274 119 69 chr2 174503187 174503250 -76184604 - L1ME3A LINE L1 -356 5814 5756 2275 64 0 0 chr2 174503250 174503516 -76184338 - AluY SINE Alu -45 266 1 766 274 119 69 chr2 174503516 174503734 -76184120 - L1ME3A LINE L1 -414 5756 5473 2364 93 0 7 chr2 174503829 174504129 -76183725 + AluSp SINE Alu 1 298 -15 225 0 0 0 chr2 174504147 174504172 -76183682 + (TG)n Simple_repeat Simple_repeat 1 25 0 265 158 79 66 chr2 174504354 174504430 -76183424 - MIR SINE MIR -13 249 173 2533 62 3 3 chr2 174504560 174504865 -76182989 - AluSp SINE Alu -8 305 1 315 295 144 12 chr2 174505141 174505314 -76182540 - L1ME3A LINE L1 -2287 5521 5326 1813 132 68 0 chr2 174505330 174505619 -76182235 - AluSx SINE Alu 0 307 1 1971 98 9 98 chr2 174505634 174505961 -76181893 - AluSx SINE Alu -14 298 1 1895 150 11 11 chr2 174506139 174506425 -76181429 - AluJo SINE Alu -24 288 3 728 144 0 9 chr2 174507016 174507127 -76180727 + FLAM_A SINE Alu 18 127 -15 303 322 0 0 chr2 174507129 174507275 -76180579 + (TA)n Simple_repeat Simple_repeat 1 146 0 228 247 71 24 chr2 174507296 174507381 -76180473 - L1MC4 LINE L1 -1339 6703 6615 * 242 264 22 44 chr2 174507364 174507455 -76180399 + L1MC4 LINE L1 6614 6702 -1340 225 213 0 0 chr2 174507488 174507535 -76180319 - L1MC4 LINE L1 -1347 6695 6649 406 283 17 25 chr2 174507682 174507802 -76180052 - MIR SINE MIR -110 152 34 2177 85 7 33 chr2 174509772 174510077 -76177777 - AluSg SINE Alu -13 297 1 2172 54 98 0 chr2 174510082 174510358 -76177496 - AluSg SINE Alu -7 303 1 21 0 0 0 chr2 174510459 174510480 -76177374 + AT_rich Low_complexity Low_complexity 1 21 0 2172 79 0 70 chr2 174510849 174511165 -76176689 - AluSc SINE Alu -10 299 6 2037 131 3 3 chr2 174511283 174511580 -76176274 + AluSg SINE Alu 1 297 -13 1515 198 152 14 chr2 174511793 174512207 -76175647 - MLT1D LTR MaLR -34 471 1 2365 97 0 0 chr2 174512229 174512518 -76175336 - AluSx SINE Alu -23 289 1 2348 90 7 0 chr2 174512920 174513209 -76174645 - AluSx SINE Alu -21 291 1 1054 99 0 20 chr2 174513268 174513419 -76174435 - FRAM SINE Alu 0 40 1 613 189 19 0 chr2 174513419 174513525 -76174329 - AluJo/FLAM SINE Alu -203 109 2 1639 189 6 6 chr2 174513550 174513862 -76173992 - AluJo SINE Alu 0 312 1 419 201 62 49 chr2 174514182 174514326 -76173528 + MIR SINE MIR 114 259 -3 1031 194 92 9 chr2 174514650 174514877 -76172977 + L1MB8 LINE L1 5926 6171 -7 1905 117 3 52 chr2 174515193 174515502 -76172352 + AluSx SINE Alu 3 296 -16 2198 91 0 17 chr2 174515813 174516110 -76171744 + AluSq SINE Alu 1 292 -21 2273 121 0 0 chr2 174516120 174516427 -76171427 + AluSx SINE Alu 1 307 -5 1901 139 3 41 chr2 174516443 174516759 -76171095 + AluSx SINE Alu 1 304 -8 2912 215 65 34 chr2 174516857 174517121 -76170733 + L1MC4 LINE L1 6786 7040 -1002 1858 116 50 43 chr2 174517121 174517234 -76170620 + AluJo SINE Alu 1 112 -200 2044 119 14 0 chr2 174517234 174517527 -76170327 - AluSx SINE Alu -15 297 1 1858 116 50 43 chr2 174517527 174517714 -76170140 + AluJo SINE Alu 112 303 -9 2912 215 65 34 chr2 174517714 174518342 -76169512 + L1MC4 LINE L1 7040 7706 -336 23 0 0 0 chr2 174518377 174518400 -76169454 + AT_rich Low_complexity Low_complexity 1 23 0 257 187 33 11 chr2 174519058 174519149 -76168705 + GA-rich Low_complexity Low_complexity 6 98 0 21 0 0 0 chr2 174519229 174519250 -76168604 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 174522112 174522137 -76165717 + AT_rich Low_complexity Low_complexity 1 25 0 249 108 0 0 chr2 174522423 174522460 -76165394 + (TTA)n Simple_repeat Simple_repeat 2 38 0 251 260 7 7 chr2 174526485 174526580 -76161274 + A-rich Low_complexity Low_complexity 1 95 0 2487 69 3 28 chr2 174527286 174527603 -76160251 - AluSx SINE Alu -3 309 1 651 216 172 24 chr2 174528127 174528465 -76159389 + L1ME4a LINE L1 5734 6121 0 2351 109 0 0 chr2 174528518 174528821 -76159033 + AluSx SINE Alu 1 303 -9 19457 95 15 21 chr2 174528899 174529291 -76158563 + Charlie3 DNA MER1_type 2 395 -2311 1540 118 0 0 chr2 174529291 174529520 -76158334 + AluSg/x SINE Alu 82 310 -2 19457 95 15 21 chr2 174529520 174530653 -76157201 + Charlie3 DNA MER1_type 395 1533 -1173 1572 178 82 0 chr2 174530653 174530934 -76156920 + AluJo SINE Alu 1 304 -8 19457 95 15 21 chr2 174530934 174531682 -76156172 + Charlie3 DNA MER1_type 1533 2260 -446 1903 177 0 0 chr2 174531682 174531976 -76155878 + AluSx SINE Alu 1 294 -18 19457 95 15 21 chr2 174531976 174532421 -76155433 + Charlie3 DNA MER1_type 2260 2706 0 824 160 0 16 chr2 174532488 174532613 -76155241 - FLAM_C SINE Alu -20 123 1 531 0 0 0 chr2 174532647 174532706 -76155148 + (GA)n Simple_repeat Simple_repeat 2 60 0 1126 175 90 9 chr2 174532728 174532951 -76154903 - AluJo SINE Alu -31 281 41 1541 147 0 0 chr2 174533548 174533773 -76154081 + AluJb SINE Alu 73 297 -15 1600 257 138 55 chr2 174534090 174534823 -76153031 + L2 LINE L2 83 754 -2560 2093 137 3 13 chr2 174534823 174535136 -76152718 - AluJb SINE Alu -2 310 1 1600 257 138 55 chr2 174535136 174535192 -76152662 + L2 LINE L2 754 804 -2510 2371 98 7 0 chr2 174535192 174535498 -76152356 - AluSq SINE Alu -5 308 1 1600 257 138 55 chr2 174535498 174535580 -76152274 + L2 LINE L2 804 1027 -2287 201 121 0 0 chr2 174535731 174535764 -76152090 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 2061 149 3 0 chr2 174537881 174538177 -76149677 - AluJb SINE Alu -14 298 2 191 202 22 146 chr2 174539324 174539413 -76148441 - MIR3 SINE MIR -23 185 108 2277 115 0 3 chr2 174540089 174540394 -76147460 + AluSx SINE Alu 1 304 -8 375 254 99 39 chr2 174540404 174540585 -76147269 - HAL1 LINE L1 -945 1562 1371 550 216 216 5 chr2 174540642 174540846 -76147008 + MIR SINE MIR 9 255 -7 564 268 142 19 chr2 174540861 174541186 -76146668 - HAL1 LINE L1 -1156 1351 987 1512 179 0 70 chr2 174541221 174541522 -76146332 + AluJb SINE Alu 1 280 -32 587 292 48 14 chr2 174541536 174541631 -76146223 - L1MC4 LINE L1 -19 8023 7933 258 32 0 0 chr2 174541631 174541662 -76146192 + (CA)n Simple_repeat Simple_repeat 2 32 0 587 292 48 14 chr2 174541662 174541854 -76146000 - L1MC4 LINE L1 -109 7933 7609 2416 87 0 0 chr2 174541861 174542159 -76145695 + AluY SINE Alu 1 298 -13 713 279 90 19 chr2 174542181 174542503 -76145351 + L1MC4a LINE L1 5580 5924 -1884 1152 170 42 19 chr2 174542760 174542972 -76144882 + MER20 DNA MER1_type 1 217 -2 1572 120 124 40 chr2 174543087 174543362 -76144492 + AluJb SINE Alu 1 298 -14 580 230 92 6 chr2 174543544 174543718 -76144136 + L1MC/D LINE L1 5631 5819 -1989 831 159 0 8 chr2 174544194 174544326 -76143528 - FLAM_A SINE Alu -2 131 1 1736 154 6 56 chr2 174544326 174544508 -76143346 - AluJo SINE Alu -4 308 147 1450 131 0 5 chr2 174544508 174544722 -76143132 - AluSg/x SINE Alu -9 301 89 1736 154 6 56 chr2 174544722 174544740 -76143114 - AluJo SINE Alu -165 147 1 751 163 8 0 chr2 174544740 174544863 -76142991 - FLAM_C SINE Alu -9 124 1 222 282 28 0 chr2 174544960 174545031 -76142823 + MIR SINE MIR 24 96 -112 280 196 87 22 chr2 174545873 174545965 -76141889 - MIR3 SINE MIR -1 207 110 1025 70 23 8 chr2 174546015 174546144 -76141710 + AluSq/x SINE Alu 1 131 -181 1120 203 91 31 chr2 174546244 174546392 -76141462 + L1MC4 LINE L1 7612 7750 -245 2018 127 7 0 chr2 174546392 174546675 -76141179 + AluSq SINE Alu 1 285 -28 1120 203 91 31 chr2 174546675 174546945 -76140909 + L1MC4 LINE L1 7750 7995 0 2232 106 10 0 chr2 174547017 174547318 -76140536 - AluSx SINE Alu -8 304 1 1667 158 11 14 chr2 174547359 174547674 -76140180 + AluJo SINE Alu 1 314 0 277 287 232 12 chr2 174547785 174547949 -76139905 + MIR SINE MIR 12 211 -51 325 244 92 43 chr2 174548645 174548809 -76139045 - L1MC/D LINE L1 -2061 5747 5576 992 112 15 0 chr2 174548811 174548945 -76138909 + AluSq/x SINE Alu 1 136 -177 1959 118 66 3 chr2 174548945 174549232 -76138622 + AluSx SINE Alu 1 305 -7 5417 109 34 2 chr2 174550211 174551073 -76136781 + L1PA14 LINE L1 5273 6161 0 183 42 0 0 chr2 174551803 174551827 -76136027 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 253 315 207 20 chr2 174552342 174552545 -76135309 - L2 LINE L2 -661 2653 2413 560 125 0 0 chr2 174552557 174552645 -76135209 - AluJ/FLAM SINE Alu -224 88 1 25 83 0 0 chr2 174552828 174552888 -76134966 + AT_rich Low_complexity Low_complexity 1 60 0 2216 112 7 0 chr2 174553679 174553974 -76133880 - AluSq SINE Alu -16 297 1 2246 124 0 6 chr2 174553975 174554289 -76133565 - AluSx SINE Alu 0 312 1 2129 142 0 0 chr2 174554730 174555026 -76132828 - AluSx SINE Alu -14 298 3 240 35 0 0 chr2 174555027 174555056 -76132798 + (TTTTC)n Simple_repeat Simple_repeat 1 29 0 2040 121 4 0 chr2 174555056 174555337 -76132517 - AluSq SINE Alu -31 282 1 1324 189 8 24 chr2 174555810 174556058 -76131796 - AluJo SINE Alu -68 244 1 251 375 80 0 chr2 174556314 174556490 -76131364 - L2 LINE L2 -995 2319 2130 1720 159 60 26 chr2 174556520 174556822 -76131032 + AluJb SINE Alu 1 312 0 384 323 32 75 chr2 174556981 174557280 -76130574 - L2 LINE L2 -227 3045 2759 2247 86 45 0 chr2 174557352 174557642 -76130212 - AluSg SINE Alu -7 303 1 2167 92 10 3 chr2 174557650 174557943 -76129911 - AluY SINE Alu -16 295 1 234 333 0 0 chr2 174557964 174558033 -76129821 + L2 LINE L2 2990 3058 -214 30 27 0 0 chr2 174558114 174558151 -76129703 + AT_rich Low_complexity Low_complexity 1 37 0 610 204 88 0 chr2 174558283 174558420 -76129434 - MIR SINE MIR -107 155 7 2145 138 0 0 chr2 174558998 174559294 -76128560 - AluJb SINE Alu -16 296 1 1708 143 35 51 chr2 174559394 174559530 -76128324 + AluSx SINE Alu 1 138 -174 2187 121 0 0 chr2 174559530 174559835 -76128019 + AluSx SINE Alu 1 305 0 1708 143 35 51 chr2 174559835 174560010 -76127844 + AluSx SINE Alu 138 309 -3 3484 177 50 48 chr2 174560017 174560065 -76127789 + L1MB8 LINE L1 4655 4701 -1477 2243 116 7 0 chr2 174560065 174560367 -76127487 + AluSg SINE Alu 1 304 -6 3484 177 50 48 chr2 174560367 174561716 -76126138 + L1MB8 LINE L1 4701 6064 -114 1672 152 12 0 chr2 174561716 174561966 -76125888 + AluSx SINE Alu 31 283 -29 3484 177 50 48 chr2 174561966 174562076 -76125778 + L1MB8 LINE L1 6064 6172 -6 1408 219 123 23 chr2 174562609 174563146 -76124708 + L1M4c LINE L1 1281 1922 -4460 2562 34 0 0 chr2 174563151 174563443 -76124411 + AluY SINE Alu 1 292 -19 1308 201 118 7 chr2 174563505 174563784 -76124070 + AluJo SINE Alu 1 310 -2 959 169 0 52 chr2 174563790 174563962 -76123892 - AluJo SINE Alu -131 181 19 215 194 0 0 chr2 174566254 174566290 -76121564 + (CA)n Simple_repeat Simple_repeat 2 37 0 31 0 0 0 chr2 174568923 174568954 -76118900 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 174570936 174570957 -76116897 + AT_rich Low_complexity Low_complexity 1 21 0 183 80 0 0 chr2 174575308 174575333 -76112521 + (TTC)n Simple_repeat Simple_repeat 2 26 0 286 258 76 26 chr2 174578858 174579004 -76108850 - MIR SINE MIR -62 146 16 1744 191 26 0 chr2 174579508 174579812 -76108042 + AluJo SINE Alu 1 312 0 456 91 0 0 chr2 174579822 174579888 -76107966 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 2042 129 3 0 chr2 174579911 174580198 -76107656 + AluSx SINE Alu 6 293 -19 2051 98 0 34 chr2 174580299 174580617 -76107237 - AluSx SINE Alu 0 308 1 255 188 0 0 chr2 174580624 174580672 -76107182 - L2 LINE L2 -5 3308 3261 24 32 0 0 chr2 174580860 174580891 -76106963 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr2 174583731 174583761 -76104093 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr2 174583862 174583909 -76103945 + AT_rich Low_complexity Low_complexity 1 47 0 1971 98 0 0 chr2 174584132 174584376 -76103478 - AluSx SINE Alu -13 299 56 32 43 0 0 chr2 174584760 174584806 -76103048 + AT_rich Low_complexity Low_complexity 1 46 0 717 229 67 76 chr2 174587857 174588172 -76099682 + L1MC4a LINE L1 5572 5883 -1925 2131 148 0 3 chr2 174588331 174588635 -76099219 - AluJo SINE Alu -9 303 1 2336 77 3 13 chr2 174588686 174588999 -76098855 - AluSg SINE Alu 0 310 1 1198 208 98 22 chr2 174589043 174589360 -76098494 + MER58B DNA MER1_type 1 341 0 232 283 19 0 chr2 174589368 174589421 -76098433 + MER5A DNA MER1_type 1 54 -135 1587 97 0 0 chr2 174589465 174589671 -76098183 + AluSg/x SINE Alu 105 310 0 496 235 42 0 chr2 174589678 174589797 -76098057 + MER5A DNA MER1_type 61 184 -5 643 185 23 39 chr2 174590090 174590220 -76097634 + FLAM_A SINE Alu 3 130 -3 382 263 68 34 chr2 174590323 174590441 -76097413 + MIR3 SINE MIR 3 124 -84 994 98 128 226 chr2 174590526 174590832 -76097022 + AluJo SINE Alu 22 297 -15 607 243 138 11 chr2 174590887 174591076 -76096778 - MIR SINE MIR -16 246 34 310 239 120 70 chr2 174591477 174591619 -76096235 - MIR SINE MIR 0 262 114 268 313 88 14 chr2 174591934 174592081 -76095773 + MIR SINE MIR 95 252 -10 541 264 50 35 chr2 174592143 174592344 -76095510 - L2 LINE L2 -1 3312 3109 260 182 55 0 chr2 174592500 174592555 -76095299 + MIR3 SINE MIR 133 190 -18 2227 78 3 11 chr2 174594219 174594528 -76093326 - AluSc SINE Alu 0 307 1 339 239 0 0 chr2 174599307 174599437 -76088417 + (TA)n Simple_repeat Simple_repeat 2 131 0 1811 171 0 10 chr2 174599498 174599791 -76088063 + AluJb SINE Alu 14 303 -9 21 0 0 0 chr2 174600148 174600169 -76087685 + AT_rich Low_complexity Low_complexity 1 21 0 554 237 132 0 chr2 174600277 174600429 -76087425 + MIR SINE MIR 90 261 -1 2038 144 0 3 chr2 174601035 174601333 -76086521 + AluJb SINE Alu 1 297 -15 228 65 0 0 chr2 174602909 174602955 -76084899 - LTR66 LTR ERVL -171 439 394 537 198 0 0 chr2 174602955 174603066 -76084788 + (CA)n Simple_repeat Simple_repeat 2 112 0 446 210 0 0 chr2 174603213 174603294 -76084560 + FLAM SINE Alu 38 118 -25 1355 219 9 6 chr2 174603328 174603666 -76084188 + L1M4 LINE L1 2386 2724 -3422 658 212 53 35 chr2 174603678 174603848 -76084006 + MER58C DNA MER1_type 1 173 -42 189 0 0 0 chr2 174603860 174603881 -76083973 + (A)n Simple_repeat Simple_repeat 1 21 0 1841 168 3 0 chr2 174603933 174604218 -76083636 + AluJb SINE Alu 1 286 -26 2450 88 0 0 chr2 174604344 174604649 -76083205 - AluY SINE Alu -6 305 1 2353 87 3 0 chr2 174604649 174604948 -76082906 - AluSp SINE Alu -12 301 1 5122 211 55 61 chr2 174604950 174605226 -76082628 + L1M4 LINE L1 2780 3056 -3090 1644 176 56 0 chr2 174605226 174605510 -76082344 + AluSx SINE Alu 1 300 -12 5122 211 55 61 chr2 174605510 174606059 -76081795 + L1M4 LINE L1 3056 3607 -2539 2352 103 0 6 chr2 174606059 174606371 -76081483 + AluSx SINE Alu 1 310 -2 5122 211 55 61 chr2 174606371 174607262 -76080592 + L1M4 LINE L1 3607 4502 -1644 1957 141 20 0 chr2 174607262 174607568 -76080286 - AluJb SINE Alu 0 312 1 5122 211 55 61 chr2 174607568 174607596 -76080258 + L1M4 LINE L1 4502 4529 -1617 1560 162 33 95 chr2 174607596 174607955 -76079899 - MER1B DNA MER1_type 0 337 1 5122 211 55 61 chr2 174607955 174608181 -76079673 + L1M4 LINE L1 4529 4740 -1406 1769 140 15 64 chr2 174608904 174609232 -76078622 + AluJo SINE Alu 1 312 0 28 0 0 0 chr2 174609741 174609769 -76078085 + AT_rich Low_complexity Low_complexity 1 28 0 1031 204 45 19 chr2 174609769 174610033 -76077821 + L1M4 LINE L1 4744 5014 -1132 303 182 30 15 chr2 174610039 174610105 -76077749 + L1ME1 LINE L1 5986 6052 -114 470 103 11 23 chr2 174610118 174610205 -76077649 + L1MB7 LINE L1 6099 6184 0 1849 92 68 0 chr2 174610249 174610500 -76077354 - AluY SINE Alu -9 302 35 1597 159 20 44 chr2 174610508 174610803 -76077051 - AluJo SINE Alu -24 288 1 23 0 0 0 chr2 174613842 174613865 -76073989 + AT_rich Low_complexity Low_complexity 1 23 0 268 205 13 13 chr2 174617431 174617509 -76070345 + (TA)n Simple_repeat Simple_repeat 1 78 0 24 32 0 0 chr2 174617656 174617687 -76070167 + AT_rich Low_complexity Low_complexity 1 31 0 2232 113 3 0 chr2 174618099 174618391 -76069463 + AluSx SINE Alu 1 293 -19 1478 189 19 7 chr2 174619472 174619630 -76068224 - AluJo SINE Alu -19 293 129 2064 151 0 0 chr2 174619630 174619928 -76067926 - AluSx SINE Alu -13 299 2 1478 189 19 7 chr2 174619928 174620039 -76067815 - AluJo SINE Alu -183 129 21 626 289 199 50 chr2 174620363 174620926 -76066928 + L2 LINE L2 2331 2977 -337 257 214 214 22 chr2 174620986 174621075 -76066779 + L2 LINE L2 3158 3263 -50 939 148 7 0 chr2 174622201 174622336 -76065518 + AluJo SINE Alu 1 136 -176 433 46 62 0 chr2 174622388 174622453 -76065401 + L1PA8 LINE L1 6102 6170 -2 185 148 0 0 chr2 174622603 174622630 -76065224 + MIR SINE MIR 72 98 -164 3454 198 46 95 chr2 174623119 174624252 -76063602 - MLT1-int LTR MaLR -14 1357 281 1363 178 3 92 chr2 174624254 174624591 -76063263 - AluJb SINE Alu 0 309 1 829 135 14 28 chr2 174624591 174624732 -76063122 - FRAM SINE Alu -5 171 33 2267 82 0 7 chr2 174624740 174625031 -76062823 - AluSg SINE Alu -21 289 1 1213 155 24 69 chr2 174625032 174625153 -76062701 - MLT1-int LTR MaLR -1094 277 152 2172 90 3 14 chr2 174625153 174625464 -76062390 - AluSq SINE Alu 0 308 1 1213 155 24 69 chr2 174625464 174625631 -76062223 - MLT1-int LTR MaLR -1219 152 1 243 0 0 0 chr2 174626083 174626110 -76061744 + (CA)n Simple_repeat Simple_repeat 2 28 0 295 282 39 0 chr2 174626111 174626189 -76061665 - MIR SINE MIR -136 126 46 2294 202 61 61 chr2 174626202 174626417 -76061437 - L1MC5 LINE L1 -36 7925 7711 2078 110 20 10 chr2 174626417 174626716 -76061138 - AluSg SINE Alu -8 302 1 2294 202 61 61 chr2 174626716 174626860 -76060994 - L1MC5 LINE L1 -250 7711 7568 2185 107 3 10 chr2 174626860 174627158 -76060696 + AluSx SINE Alu 1 296 -16 2294 202 61 61 chr2 174627158 174627419 -76060435 - L1MC5 LINE L1 -393 7568 7308 2106 90 14 0 chr2 174627419 174627734 -76060120 - AluY SINE Alu 0 311 1 2294 202 61 61 chr2 174627734 174628033 -76059821 - L1MC5 LINE L1 -652 7309 7004 2246 108 0 7 chr2 174630122 174630445 -76057409 + AluSp SINE Alu 2 313 0 2190 119 0 3 chr2 174630457 174630750 -76057104 + AluSx SINE Alu 1 292 -20 1634 176 3 52 chr2 174631081 174631387 -76056467 - AluJb SINE Alu -21 291 1 477 34 0 0 chr2 174631917 174631976 -76055878 + (CA)n Simple_repeat Simple_repeat 2 60 0 589 301 124 15 chr2 174632032 174632480 -76055374 + L2 LINE L2 2730 3220 -93 222 308 0 0 chr2 174632844 174632909 -76054945 + (CA)n Simple_repeat Simple_repeat 2 66 0 1966 155 39 3 chr2 174632913 174633249 -76054605 - MER7A DNA MER2_type 0 346 1 234 288 34 0 chr2 174633354 174633413 -76054441 + L2 LINE L2 3212 3272 0 1123 223 65 66 chr2 174634026 174634644 -76053210 + L1MC5 LINE L1 7182 7798 -163 447 152 54 22 chr2 174634696 174634788 -76053066 + FRAM SINE Alu 61 155 -21 1743 144 0 35 chr2 174634877 174635161 -76052693 + AluJb SINE Alu 13 286 -26 22 0 0 0 chr2 174635161 174635183 -76052671 + AT_rich Low_complexity Low_complexity 1 22 0 454 327 61 6 chr2 174635253 174635418 -76052436 + MER5A DNA MER1_type 16 189 0 198 328 35 0 chr2 174635478 174635536 -76052318 - MIR SINE MIR -63 145 86 405 0 0 0 chr2 174635714 174635759 -76052095 + (CA)n Simple_repeat Simple_repeat 2 46 0 2455 79 0 16 chr2 174636349 174636654 -76051200 + AluY SINE Alu 1 300 -11 642 232 36 30 chr2 174636872 174637040 -76050814 - L1ME2 LINE L1 -10 6154 5986 2379 82 0 7 chr2 174637311 174637605 -76050249 - AluSp SINE Alu -21 292 1 545 213 106 19 chr2 174639782 174639942 -76047912 + L2 LINE L2 3118 3291 -22 2118 107 21 3 chr2 174640224 174640513 -76047341 + AluSc SINE Alu 1 294 -15 235 241 19 0 chr2 174640546 174640600 -76047254 + MER5A DNA MER1_type 51 105 -84 26 30 0 0 chr2 174640920 174640953 -76046901 + AT_rich Low_complexity Low_complexity 1 33 0 817 135 0 0 chr2 174640964 174641075 -76046779 - FLAM_C SINE Alu -32 111 1 1213 195 0 0 chr2 174641234 174641439 -76046415 - AluJo SINE Alu -107 205 1 748 275 129 83 chr2 174641439 174642221 -76045633 - HAL1 LINE L1 -1595 912 95 2469 92 0 0 chr2 174642355 174642660 -76045194 - AluSg SINE Alu -5 305 1 309 302 0 21 chr2 174643054 174643150 -76044704 + L1MC4 LINE L1 6610 6703 -1339 * 354 289 0 0 chr2 174643094 174643184 -76044670 - L1MC4 LINE L1 -1339 6703 6614 297 0 0 0 chr2 174643234 174643267 -76044587 + (TG)n Simple_repeat Simple_repeat 2 34 0 405 225 14 36 chr2 174643267 174643395 -76044459 + HAL1 LINE L1 1037 1163 -1344 457 297 155 5 chr2 174643508 174643832 -76044022 - L2 LINE L2 -245 3068 2698 1898 149 0 32 chr2 174643849 174644165 -76043689 - AluJb SINE Alu -4 308 3 246 32 0 0 chr2 174644167 174644198 -76043656 + (TA)n Simple_repeat Simple_repeat 1 31 0 2157 124 0 57 chr2 174644201 174644532 -76043322 - AluSx SINE Alu 0 312 1 1857 141 25 14 chr2 174644546 174644829 -76043025 - AluJo SINE Alu -26 286 1 212 170 43 0 chr2 174644839 174644886 -76042968 - L2 LINE L2 -609 2705 2657 709 218 8 99 chr2 174644908 174645080 -76042774 - L1ME LINE L1 -303 5818 5677 1735 109 124 8 chr2 174645080 174645345 -76042509 - AluSg1 SINE Alu -13 296 1 709 218 8 99 chr2 174645345 174645434 -76042420 - L1ME LINE L1 -444 5677 5581 2178 112 3 0 chr2 174645556 174645860 -76041994 + AluY SINE Alu 1 305 -6 2143 108 25 3 chr2 174646095 174646381 -76041473 + AluSx SINE Alu 1 292 -20 2365 92 0 7 chr2 174646386 174646691 -76041163 + AluSx SINE Alu 3 305 -7 2978 131 34 12 chr2 174648627 174648920 -76038934 + L1MB8 LINE L1 5662 5972 -206 2596 55 0 0 chr2 174648920 174649228 -76038626 + AluY SINE Alu 1 308 -3 2978 131 34 12 chr2 174649228 174649438 -76038416 + L1MB8 LINE L1 5972 6176 -2 2190 95 7 29 chr2 174649449 174649755 -76038099 + AluSx SINE Alu 1 299 -13 1665 150 11 4 chr2 174649760 174650020 -76037834 + AluSx SINE Alu 51 312 0 2135 142 0 16 chr2 174650059 174650376 -76037478 + AluJb SINE Alu 1 312 0 3399 157 81 24 chr2 174651108 174651162 -76036692 + MER44D DNA MER2_type 38 87 -2500 2362 66 3 10 chr2 174651162 174651467 -76036387 + AluY SINE Alu 1 303 -8 3399 157 81 24 chr2 174651467 174652041 -76035813 + MER44D DNA MER2_type 87 702 -3 1024 246 127 39 chr2 174652044 174652508 -76035346 + L1MC5 LINE L1 7010 7514 -447 2173 98 28 0 chr2 174652519 174652806 -76035048 + AluSx SINE Alu 1 295 -17 287 283 90 14 chr2 174652834 174652979 -76034875 + L1MEc LINE L1 62 217 -6179 1302 116 0 6 chr2 174653167 174653339 -76034515 + FRAM SINE Alu 1 167 -9 383 250 82 59 chr2 174653339 174653595 -76034259 + L1MEc LINE L1 770 1046 -5174 * 969 188 14 29 chr2 174653590 174653797 -76034057 + L1MC5 LINE L1 7696 7899 -62 2580 60 0 0 chr2 174654021 174654321 -76033533 + AluY SINE Alu 1 300 -11 2478 102 46 28 chr2 174654635 174654674 -76033180 + L1PB2 LINE L1 5750 5787 -364 2138 89 25 4 chr2 174654674 174654955 -76032899 + AluSx SINE Alu 11 297 -15 234 0 0 0 chr2 174654956 174654982 -76032872 + (TA)n Simple_repeat Simple_repeat 2 27 0 2478 102 46 28 chr2 174654982 174655332 -76032522 + L1PB2 LINE L1 5786 6148 -3 1071 180 76 5 chr2 174655371 174655582 -76032272 + AluJb SINE Alu 86 311 -1 2160 122 0 13 chr2 174655877 174656181 -76031673 + AluSx SINE Alu 1 300 -12 2215 105 0 16 chr2 174656432 174656738 -76031116 + AluSx SINE Alu 1 301 -11 1845 130 76 21 chr2 174656755 174657085 -76030769 - THE1C LTR MaLR 0 375 28 269 205 0 13 chr2 174658116 174658125 -76029729 + (CATA)n Simple_repeat Simple_repeat 2 10 -68 373 132 118 0 chr2 174658125 174658193 -76029661 + MADE1 DNA Mariner 5 80 0 269 205 0 13 chr2 174658193 174658261 -76029593 + (CATA)n Simple_repeat Simple_repeat 10 78 0 1612 121 4 21 chr2 174658453 174658692 -76029162 - AluSx SINE Alu -77 235 1 2286 110 7 0 chr2 174658935 174659243 -76028611 - AluSx SINE Alu 0 312 3 314 242 71 0 chr2 174659384 174659483 -76028371 + MIR SINE MIR 66 171 -91 1310 135 0 15 chr2 174659483 174659683 -76028171 - AluJb SINE Alu -13 299 103 213 339 0 0 chr2 174659710 174659775 -76028079 + MIR SINE MIR 198 262 0 2099 119 14 0 chr2 174662531 174662825 -76025029 + AluSx SINE Alu 1 298 -14 206 196 0 78 chr2 174662856 174662907 -76024947 + MIR3 SINE MIR 152 198 -10 2096 137 0 0 chr2 174663092 174663385 -76024469 + AluJo SINE Alu 1 293 -19 23 68 0 0 chr2 174663547 174663591 -76024263 + AT_rich Low_complexity Low_complexity 1 44 0 2014 125 10 7 chr2 174663905 174664202 -76023652 + AluSx SINE Alu 1 298 -14 691 90 0 18 chr2 174664211 174664322 -76023532 + (GGAA)n Simple_repeat Simple_repeat 4 112 0 828 206 14 47 chr2 174714617 174714831 -75973023 + L1MB7 LINE L1 4644 4850 -1296 1798 183 6 3 chr2 174714836 174715257 -75972597 - AluJo SINE Alu 0 422 1 890 208 10 21 chr2 174715260 174715452 -75972402 + L1MB7 LINE L1 4847 5036 -1110 844 201 32 7 chr2 174715511 174715665 -75972189 + FAM SINE Alu 1 158 -17 261 0 0 0 chr2 174715668 174715697 -75972157 + (TA)n Simple_repeat Simple_repeat 2 30 0 568 87 12 52 chr2 174717037 174717209 -75970645 + (TA)n Simple_repeat Simple_repeat 1 165 0 2194 119 0 0 chr2 174717209 174717495 -75970359 - AluSx SINE Alu -26 286 1 233 190 25 76 chr2 174717709 174717788 -75970066 - L1MD3 LINE L1 -11 7984 7910 3679 197 34 44 chr2 174717948 174718988 -75968866 - L1ME2 LINE L1 -10 6154 5129 6079 26 21 1 chr2 174718989 174719691 -75968163 - SVA Other Other -1 1385 670 304 301 0 0 chr2 174719813 174719896 -75967958 - L1MC4 LINE L1 -1037 7005 6923 818 204 0 0 chr2 174719899 174720031 -75967823 - FLAM_A SINE Alu -8 134 3 621 204 20 0 chr2 174720133 174720231 -75967623 - AluJ/FLAM SINE Alu -211 101 2 469 211 19 0 chr2 174720242 174720346 -75967508 - L1MC5 LINE L1 -1124 6837 6732 26 30 0 0 chr2 174720348 174720381 -75967473 + AT_rich Low_complexity Low_complexity 1 33 0 385 269 133 87 chr2 174720595 174721007 -75966847 - HAL1 LINE L1 -1231 1276 846 4042 164 37 33 chr2 174721151 174721878 -75965976 - MER44D DNA MER2_type 0 605 4 1107 275 232 30 chr2 174722723 174723280 -75964574 + MER115 DNA AcHobo 24 692 -1 12360 113 11 63 chr2 174723486 174726011 -75961843 + L1P3 LINE L1 5 2485 -3976 2315 104 0 0 chr2 174726011 174726309 -75961545 + AluSg SINE Alu 1 298 -12 12360 113 11 63 chr2 174726309 174726500 -75961354 + L1P3 LINE L1 2485 2684 -3777 3604 163 80 27 chr2 174726879 174727654 -75960200 + L1MB7 LINE L1 5368 6183 -1 391 328 141 50 chr2 174727672 174728068 -75959786 + HAL1b LINE L1 98 529 -819 795 189 127 88 chr2 174728260 174728423 -75959431 + L1MC5 LINE L1 7375 7530 -431 2183 99 19 32 chr2 174728423 174728736 -75959118 + AluSx SINE Alu 1 309 -3 795 189 127 88 chr2 174728736 174729081 -75958773 + L1MC5 LINE L1 7530 7917 -44 1644 97 166 12 chr2 174729307 174729566 -75958288 - AluSg1 SINE Alu -10 299 1 358 233 226 20 chr2 174729572 174729718 -75958136 + MER5B DNA MER1_type 3 178 0 1361 169 31 38 chr2 174729801 174730077 -75957777 + L1ME3A LINE L1 5620 5895 -275 2309 108 0 0 chr2 174730077 174730383 -75957471 - AluSq SINE Alu -7 306 1 1361 169 31 38 chr2 174730383 174730426 -75957428 + L1ME3A LINE L1 5895 5937 -233 784 106 41 0 chr2 174730503 174730626 -75957228 + L1PA13 LINE L1 6036 6163 0 1831 142 4 4 chr2 174730715 174730983 -75956871 + AluSx SINE Alu 1 268 -44 2018 202 49 11 chr2 174731034 174731479 -75956375 + MLT1C LTR MaLR 6 467 0 1324 150 44 0 chr2 174732868 174733094 -75954760 - MER46A DNA MER2_type 0 236 1 2597 112 94 40 chr2 174734288 174734950 -75952904 + L1P4 LINE L1 4805 5489 -672 20721 78 25 7 chr2 174735117 174738677 -75949177 + L1PA7 LINE L1 2221 5845 -309 2316 95 0 7 chr2 174738677 174738982 -75948872 + AluY SINE Alu 1 303 -8 20721 78 25 7 chr2 174738982 174739278 -75948576 + L1PA7 LINE L1 5845 6134 -20 593 255 40 7 chr2 174739516 174739665 -75948189 - MER63A DNA MER1_type 0 210 57 205 281 62 16 chr2 174740257 174740321 -75947533 - MIR SINE MIR -73 135 69 183 287 45 16 chr2 174741215 174741281 -75946573 + MIR SINE MIR 56 122 -107 239 291 73 43 chr2 174741765 174741896 -75945958 - MIR3 SINE MIR -108 100 6 1680 119 16 122 chr2 174742932 174743309 -75944545 + MER1B DNA MER1_type 1 337 0 216 0 0 0 chr2 174747011 174747035 -75940819 + (TA)n Simple_repeat Simple_repeat 2 25 0 225 0 0 0 chr2 174747378 174747403 -75940451 + (TA)n Simple_repeat Simple_repeat 1 25 0 2326 88 7 0 chr2 174747404 174747698 -75940156 - AluSx SINE Alu -16 296 1 852 194 75 0 chr2 174747809 174747995 -75939859 - MER3 DNA MER1_type 0 209 10 21 0 0 0 chr2 174749475 174749496 -75938358 + AT_rich Low_complexity Low_complexity 1 21 0 2244 156 18 36 chr2 174751201 174751643 -75936211 + Tigger2a DNA MER2_type 1 434 0 430 174 0 0 chr2 174752049 174752135 -75935719 + L1M4 LINE L1 4867 4952 -1194 1873 167 3 3 chr2 174752141 174752435 -75935419 + AluJb SINE Alu 3 296 -16 485 104 0 0 chr2 174752566 174752643 -75935211 + AluSp/q SINE Alu 235 311 -2 2250 100 3 37 chr2 174752736 174752853 -75935001 - AluSg SINE Alu 0 310 191 1967 114 34 27 chr2 174752853 174753151 -75934703 - AluSp SINE Alu -11 302 3 2089 125 7 7 chr2 174753153 174753457 -75934397 - AluSx SINE Alu -8 304 1 2250 100 3 37 chr2 174753457 174753657 -75934197 - AluSg SINE Alu -120 190 1 270 331 123 39 chr2 174753726 174753880 -75933974 - L3 LINE CR1 -5 1572 1406 1492 85 5 10 chr2 174754212 174754412 -75933442 + AluSg/x SINE Alu 101 299 -13 2135 102 0 3 chr2 174754421 174754705 -75933149 + AluSx SINE Alu 1 283 -29 227 79 26 0 chr2 174754705 174754743 -75933111 + (CA)n Simple_repeat Simple_repeat 2 40 0 189 107 0 0 chr2 174757289 174757317 -75930537 + (A)n Simple_repeat Simple_repeat 1 28 0 2469 45 10 0 chr2 174757402 174757694 -75930160 + AluY SINE Alu 1 295 -16 338 198 219 0 chr2 174757801 174757897 -75929957 + MIR3 SINE MIR 87 203 -5 257 345 67 18 chr2 174758335 174758500 -75929354 + MIR3 SINE MIR 24 196 -12 2189 94 24 3 chr2 174758614 174758902 -75928952 - AluSg SINE Alu -16 294 1 1764 176 4 4 chr2 174759144 174759423 -75928431 + AluJb SINE Alu 1 279 -33 273 29 0 0 chr2 174759424 174759458 -75928396 + (CA)n Simple_repeat Simple_repeat 2 35 0 185 260 0 60 chr2 174759679 174759729 -75928125 - L2 LINE L2 -4 3268 3222 468 293 245 0 chr2 174759963 174760171 -75927683 - MIR SINE MIR -1 261 3 2284 94 0 16 chr2 174761184 174761492 -75926362 + AluSx SINE Alu 1 303 -9 1809 193 0 13 chr2 174761528 174761844 -75926010 + AluJo SINE Alu 1 312 0 319 257 37 46 chr2 174762990 174763099 -75924755 + L1MC/D LINE L1 5565 5672 -570 2419 73 0 3 chr2 174763117 174763417 -75924437 + AluY SINE Alu 1 299 -12 231 283 76 31 chr2 174763418 174763479 -75924375 + L1MC/D LINE L1 5679 5736 -2072 1458 134 9 18 chr2 174763479 174763696 -75924158 + AluJb SINE Alu 86 300 -12 231 283 76 31 chr2 174763696 174763857 -75923997 + L1MC/D LINE L1 5736 5911 -1897 2070 117 29 0 chr2 174764223 174764529 -75923325 - AluSx SINE Alu 0 314 1 275 208 13 0 chr2 174764602 174764679 -75923175 + MER113 DNA MER1_type? 331 408 -113 1981 56 0 0 chr2 174764761 174764995 -75922859 - AluY SINE Alu -77 234 1 196 182 55 91 chr2 174764997 174765052 -75922802 - L2 LINE L2 -10 3262 3210 2089 106 0 45 chr2 174765131 174765443 -75922411 - AluSq SINE Alu -15 298 1 1761 110 0 4 chr2 174765491 174765737 -75922117 + AluSg SINE Alu 54 298 -12 1694 168 0 63 chr2 174765748 174766081 -75921773 + AluJo SINE Alu 1 312 0 363 280 149 11 chr2 174766157 174766332 -75921522 - L2 LINE L2 -244 3069 2871 294 124 24 4 chr2 174766358 174766419 -75921435 - Alu SINE Alu -251 48 1 377 268 161 12 chr2 174766510 174766678 -75921176 + MIR SINE MIR 25 217 -45 787 277 136 24 chr2 174767326 174767737 -75920117 - MLT1K LTR MaLR -108 480 24 333 330 61 26 chr2 174768184 174768299 -75919555 - L2 LINE L2 -4 3268 3150 2010 119 25 0 chr2 174768547 174768855 -75918999 + AluSx SINE Alu 1 312 0 925 246 20 0 chr2 174768887 174769082 -75918772 - MIR SINE MIR 0 262 64 945 191 27 0 chr2 174769245 174769428 -75918426 + L1PA16 LINE L1 5968 6155 -11 2137 94 18 0 chr2 174769428 174769704 -75918150 + AluSx SINE Alu 14 294 -18 929 221 89 31 chr2 174769713 174770138 -75917716 - L1MC5 LINE L1 -8 7953 7504 24 53 0 0 chr2 174770905 174770943 -75916911 + AT_rich Low_complexity Low_complexity 1 38 0 216 200 47 118 chr2 174771742 174771827 -75916027 - MIR3 SINE MIR -129 79 1 * 288 209 47 81 chr2 174771827 174771895 -75915959 + L2 LINE L2 3173 3237 -35 2202 98 0 16 chr2 174772303 174772608 -75915246 - AluSg SINE Alu -10 300 1 655 144 8 80 chr2 174773314 174773439 -75914415 + AluJo SINE Alu 92 207 -105 1097 183 8 8 chr2 174774020 174774058 -75913796 - L1PA16 LINE L1 -7 6161 6124 2454 69 7 0 chr2 174774058 174774361 -75913493 - AluY SINE Alu -6 305 1 1097 183 8 8 chr2 174774361 174774546 -75913308 - L1PA16 LINE L1 -44 6124 5944 3349 148 78 15 chr2 174774569 174775157 -75912697 - MER51A LTR ERV1 -9 625 1 1139 127 0 6 chr2 174775157 174775322 -75912532 - L1PA16 LINE L1 -219 5947 5784 1243 113 0 17 chr2 174775575 174775752 -75912102 - AluSq SINE Alu -8 305 132 2339 72 3 3 chr2 174775759 174776049 -75911805 - AluSp SINE Alu -23 290 1 340 314 76 66 chr2 174776140 174776443 -75911411 + L1MC4a LINE L1 5876 6181 -1627 2211 113 0 0 chr2 174776525 174776826 -75911028 - AluY SINE Alu -10 301 1 185 366 68 41 chr2 174776826 174777110 -75910744 + L2 LINE L2 2599 2893 -421 184 30 61 0 chr2 174777169 174777202 -75910652 + T-rich Low_complexity Low_complexity 2 36 0 279 336 61 38 chr2 174777756 174777887 -75909967 - MIR3 SINE MIR -33 175 42 892 108 0 0 chr2 174778052 174778172 -75909682 - AluSx SINE Alu -9 303 184 223 364 68 23 chr2 174778196 174778372 -75909482 - L2 LINE L2 -529 2785 2602 1034 54 8 8 chr2 174778372 174778501 -75909353 + AluY SINE Alu 1 129 -182 1322 154 0 19 chr2 174778501 174778709 -75909145 - AluSx SINE Alu -108 204 1 1827 162 20 0 chr2 174778765 174779067 -75908787 - AluJb SINE Alu -4 308 1 871 228 160 38 chr2 174779146 174779357 -75908497 - HAL1 LINE L1 -70 2437 2253 1961 150 7 0 chr2 174779357 174779651 -75908203 - AluJb SINE Alu -16 296 1 871 228 160 38 chr2 174779651 174779839 -75908015 - HAL1 LINE L1 -254 2253 1989 649 238 69 21 chr2 174779839 174780028 -75907826 - L2 LINE L2 -8 3305 3108 592 244 98 26 chr2 174780029 174780222 -75907632 - HAL1 LINE L1 -993 1514 1308 31 0 0 0 chr2 174780355 174780386 -75907468 + AT_rich Low_complexity Low_complexity 1 31 0 1799 168 9 23 chr2 174780639 174780984 -75906870 - L1MB7 LINE L1 -19 6165 5826 2366 84 3 10 chr2 174781378 174781688 -75906166 + AluSp SINE Alu 1 308 -5 33 25 0 0 chr2 174781773 174781813 -75906041 + AT_rich Low_complexity Low_complexity 1 40 0 2125 95 7 33 chr2 174781847 174782151 -75905703 + AluY SINE Alu 1 296 -15 8092 78 29 120 chr2 174782330 174783836 -75904018 + SVA Other Other 7 1375 -11 33 25 0 0 chr2 174783982 174784022 -75903832 + AT_rich Low_complexity Low_complexity 1 40 0 2192 122 0 0 chr2 174784022 174784310 -75903544 - AluSx SINE Alu -24 288 1 344 236 317 37 chr2 174784504 174784665 -75903189 - L2 LINE L2 -1 3312 3107 366 347 35 90 chr2 174784703 174785046 -75902808 - L2 LINE L2 -4 3268 2945 214 287 50 30 chr2 174785636 174785737 -75902117 + L2 LINE L2 3199 3301 -12 2201 119 3 10 chr2 174786134 174786445 -75901409 - AluSg SINE Alu -1 309 1 1803 173 0 17 chr2 174786488 174786789 -75901065 + AluJo SINE Alu 3 298 -14 1738 177 3 10 chr2 174787981 174788286 -75899568 + AluJo SINE Alu 1 303 -9 319 241 83 69 chr2 174788452 174788545 -75899309 - L1MC4 LINE L1 -1 8041 7951 1787 153 3 37 chr2 174788545 174788889 -75898965 - AluJo SINE Alu 0 334 1 319 241 83 69 chr2 174788889 174788931 -75898923 - L1MC4 LINE L1 -91 7951 7911 195 114 0 0 chr2 174788931 174788966 -75898888 + (TCCA)n Simple_repeat Simple_repeat 3 37 0 319 241 83 69 chr2 174788966 174789044 -75898810 - L1MC4 LINE L1 -131 7911 7823 1946 128 0 64 chr2 174789063 174789390 -75898464 - AluSx SINE Alu -6 306 1 276 247 75 32 chr2 174789400 174789493 -75898361 - L1ME2 LINE L1 0 6164 6068 2014 151 31 54 chr2 174789503 174789620 -75898234 - L1MB4 LINE L1 0 6180 6062 2182 106 0 23 chr2 174789620 174789922 -75897932 + AluSq SINE Alu 1 295 -18 2014 151 31 54 chr2 174789922 174790194 -75897660 - L1MB4 LINE L1 -118 6062 5800 1090 171 0 11 chr2 174790206 174790382 -75897472 - AluJo SINE Alu -19 293 120 556 313 47 21 chr2 174790907 174791140 -75896714 - Charlie8 DNA MER1_type -2178 239 1 22 0 0 0 chr2 174791320 174791342 -75896512 + AT_rich Low_complexity Low_complexity 1 22 0 204 67 0 0 chr2 174791748 174791778 -75896076 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 944 179 0 0 chr2 174791793 174791944 -75895910 - FAM SINE Alu -34 151 1 21 43 0 22 chr2 174791978 174791996 -75895858 + AT_rich Low_complexity Low_complexity 1 18 -27 1954 159 0 0 chr2 174791996 174792286 -75895568 - AluJb SINE Alu -22 290 1 21 43 0 22 chr2 174792286 174792313 -75895541 + AT_rich Low_complexity Low_complexity 18 45 0 1883 151 3 17 chr2 174792313 174792605 -75895249 - AluJo SINE Alu -24 288 1 1392 202 129 121 chr2 174792608 174793018 -75894836 - L1MC5 LINE L1 -35 7926 7521 451 82 49 0 chr2 174793018 174793079 -75894775 + U6 snRNA snRNA 1 64 -43 1392 202 129 121 chr2 174793079 174793240 -75894614 - L1MC5 LINE L1 -440 7521 7363 1489 107 44 0 chr2 174793240 174793446 -75894408 + MER20 DNA MER1_type 1 215 -4 1392 202 129 121 chr2 174793446 174793712 -75894142 - L1MC5 LINE L1 -598 7363 7021 678 153 29 15 chr2 174794627 174794764 -75893090 - L1MB2 LINE L1 -3 6168 6030 2302 103 0 0 chr2 174795101 174795402 -75892452 - AluSg SINE Alu -9 301 1 2189 104 3 13 chr2 174795995 174796293 -75891561 - AluSx SINE Alu -17 295 1 664 141 7 148 chr2 174796511 174796653 -75891201 + FLAM_A SINE Alu 1 122 -11 1932 159 0 3 chr2 174797852 174798147 -75889707 + AluJb SINE Alu 1 294 -18 2302 96 10 0 chr2 174798198 174798501 -75889353 + AluSg SINE Alu 1 306 -4 790 54 0 0 chr2 174798927 174799020 -75888834 + AluSx SINE Alu 2 94 -219 2371 75 0 63 chr2 174799022 174799353 -75888501 + AluSg SINE Alu 1 310 0 1519 121 0 0 chr2 174799353 174799550 -75888304 + AluSx SINE Alu 80 277 -33 1759 133 0 8 chr2 174799583 174799831 -75888023 + AluSx SINE Alu 1 246 -66 2291 67 27 14 chr2 174799831 174800128 -75887726 + AluY SINE Alu 1 301 -10 232 213 82 0 chr2 174800128 174800189 -75887665 + AluSx SINE Alu 234 299 -3 222 62 0 0 chr2 174800458 174800490 -75887364 + (TATG)n Simple_repeat Simple_repeat 2 33 0 2053 122 3 3 chr2 174800493 174800779 -75887075 - AluSx SINE Alu -26 286 1 2200 114 0 0 chr2 174802872 174803161 -75884693 - AluSg SINE Alu -21 289 1 23 54 0 0 chr2 174803318 174803355 -75884499 + AT_rich Low_complexity Low_complexity 1 37 0 2834 216 138 85 chr2 174805386 174805602 -75882252 - HAL1 LINE L1 -57 2450 2247 2379 66 35 0 chr2 174805602 174805891 -75881963 + AluY SINE Alu 1 299 -12 2834 216 138 85 chr2 174805891 174806048 -75881806 - HAL1 LINE L1 -260 2247 2100 1962 143 7 0 chr2 174806048 174806335 -75881519 - AluSx SINE Alu -23 289 1 2834 216 138 85 chr2 174806335 174806505 -75881349 - HAL1 LINE L1 -407 2100 1940 3433 137 32 71 chr2 174806505 174806566 -75881288 - L1MB5 LINE L1 0 6174 6112 2145 123 3 7 chr2 174806566 174806868 -75880986 + AluSx SINE Alu 1 301 -11 3433 137 32 71 chr2 174806868 174807079 -75880775 - L1MB5 LINE L1 -62 6112 5894 2316 101 0 3 chr2 174807079 174807376 -75880478 - AluSq SINE Alu -17 296 1 3433 137 32 71 chr2 174807376 174807751 -75880103 - L1MB5 LINE L1 -280 5894 5551 2834 216 138 85 chr2 174807751 174808014 -75879840 - HAL1 LINE L1 -567 1940 1692 1935 141 7 3 chr2 174808014 174808305 -75879549 + AluJb SINE Alu 1 292 -20 2834 216 138 85 chr2 174808305 174808319 -75879535 - HAL1 LINE L1 -815 1692 1680 2109 100 0 0 chr2 174808319 174808617 -75879237 + AluSx SINE Alu 13 310 0 2834 216 138 85 chr2 174808617 174809276 -75878578 - HAL1 LINE L1 -827 1680 887 1309 162 0 13 chr2 174809277 174809505 -75878349 - AluJb SINE Alu -6 306 82 1536 303 68 24 chr2 174809525 174810142 -75877712 - HAL1 LINE L1 -1842 665 22 201 74 0 0 chr2 174810268 174810295 -75877559 + (CCTA)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr2 174810718 174810739 -75877115 + AT_rich Low_complexity Low_complexity 1 21 0 749 206 64 28 chr2 174810741 174810959 -75876895 - L1MC5 LINE L1 -30 7931 7706 21 0 0 0 chr2 174811386 174811407 -75876447 + AT_rich Low_complexity Low_complexity 1 21 0 405 123 0 0 chr2 174812702 174812767 -75875087 + (TG)n Simple_repeat Simple_repeat 2 66 0 264 259 0 0 chr2 174813560 174813641 -75874213 + GA-rich Low_complexity Low_complexity 2 82 0 21 57 0 0 chr2 174815486 174815521 -75872333 + AT_rich Low_complexity Low_complexity 1 35 0 226 194 30 15 chr2 174815932 174815999 -75871855 + GA-rich Low_complexity Low_complexity 5 72 0 739 117 0 0 chr2 174816117 174816211 -75871643 + AluS SINE Alu 2 95 -218 1486 285 31 34 chr2 174816351 174817433 -75870421 - MER51A-int LTR ERV1 0 8191 7326 433 115 192 0 chr2 174817676 174817754 -75870100 - MER51A-int LTR ERV1 -4004 3533 3441 2149 115 26 7 chr2 174817758 174818062 -75869792 - AluSx SINE Alu -2 310 1 1143 180 0 14 chr2 174818065 174818287 -75869567 - MER51A-int LTR ERV1 -551 4329 4111 * 1567 168 66 0 chr2 174818282 174818556 -75869298 - MER51A-int LTR ERV1 -3574 2372 2081 2091 130 3 3 chr2 174818873 174819165 -75868689 + AluSg SINE Alu 1 292 -18 406 309 0 6 chr2 174819576 174819730 -75868124 - MER51A-int LTR ERV1 -4187 2489 2082 256 225 0 62 chr2 174820049 174820129 -75867725 - MER51A-int LTR ERV1 -5489 1040 966 590 275 17 59 chr2 174820365 174820652 -75867202 - MER51A-int LTR ERV1 -5271 1820 1546 988 233 30 43 chr2 174820677 174820977 -75866877 - MER51A-int LTR ERV1 -6967 849 554 2243 216 24 7 chr2 174821281 174821740 -75866114 - MER51A-int LTR ERV1 -4367 513 47 319 114 100 14 chr2 174821823 174821893 -75865961 - MER51A-int LTR ERV1 -7740 76 1 1351 143 188 68 chr2 174821893 174822277 -75865577 - MER51A LTR ERV1 0 634 205 2207 107 0 3 chr2 174823068 174823357 -75864497 - AluSx SINE Alu -24 288 1 189 0 0 0 chr2 174824092 174824113 -75863741 + (GA)n Simple_repeat Simple_repeat 2 22 0 1949 155 3 16 chr2 174824574 174824878 -75862976 + AluJb SINE Alu 1 300 -12 35 24 0 0 chr2 174824940 174824982 -75862872 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 174824994 174825015 -75862839 + AT_rich Low_complexity Low_complexity 1 21 0 1495 189 63 14 chr2 174825724 174826010 -75861844 - AluJb SINE Alu -12 300 1 22 35 0 0 chr2 174826152 174826181 -75861673 + AT_rich Low_complexity Low_complexity 1 29 0 181 308 77 13 chr2 174826278 174826356 -75861498 + MIR3 SINE MIR 113 195 -13 418 235 60 98 chr2 174826930 174826997 -75860857 + MIR SINE MIR 87 155 -107 1915 161 0 10 chr2 174826997 174827296 -75860558 + AluJb SINE Alu 2 297 -15 418 235 60 98 chr2 174827296 174827411 -75860443 + MIR SINE MIR 155 262 0 22 0 0 0 chr2 174827635 174827657 -75860197 + AT_rich Low_complexity Low_complexity 1 22 0 986 285 84 27 chr2 174827659 174828366 -75859488 + L1ME LINE L1 4927 5702 -460 2049 124 50 7 chr2 174828366 174828665 -75859189 + AluSx SINE Alu 1 312 0 986 285 84 27 chr2 174828665 174828754 -75859100 + L1ME LINE L1 5702 5784 -378 2370 15 0 0 chr2 174828863 174829130 -75858724 - AluYa5 SINE Alu -44 267 1 2493 82 20 8 chr2 174829347 174829700 -75858154 - L1PA14 LINE L1 -5 6156 5800 475 114 79 5 chr2 174830091 174830485 -75857369 + (TA)n Simple_repeat Simple_repeat 1 422 0 1592 142 0 4 chr2 174830851 174831077 -75856777 - AluJb SINE Alu -76 236 12 2118 145 7 0 chr2 174831953 174832256 -75855598 - AluSx SINE Alu -7 305 1 1391 211 54 41 chr2 174832349 174832718 -75855136 - MLT1A2 LTR MaLR 0 374 1 1096 208 74 25 chr2 174832903 174833187 -75854667 - MER2 DNA MER2_type -1 344 47 1982 169 0 0 chr2 174833212 174833514 -75854340 + AluJo SINE Alu 2 303 -9 1978 75 27 10 chr2 174834791 174835085 -75852769 + L1PA14 LINE L1 5863 6161 0 1358 191 114 0 chr2 174839421 174839531 -75848323 + AluJo SINE Alu 1 97 -215 180 0 0 0 chr2 174839531 174839551 -75848303 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1358 191 114 0 chr2 174839551 174839702 -75848152 + AluJo SINE Alu 97 292 -20 5690 56 0 10 chr2 174840155 174840875 -75846979 + L1PA6 LINE L1 5439 6151 -3 2167 112 16 0 chr2 174843094 174843398 -75844456 - AluSp SINE Alu -4 309 1 1866 138 7 13 chr2 174843433 174843737 -75844117 - AluJb SINE Alu 0 312 11 2371 99 0 6 chr2 174844164 174844477 -75843377 + AluSx SINE Alu 1 311 -1 725 170 85 31 chr2 174844490 174844682 -75843172 - L1MB7 LINE L1 -5 6173 5976 1377 217 19 0 chr2 174844682 174844945 -75842909 - AluJo SINE Alu -44 268 1 2882 150 120 81 chr2 174844946 174845014 -75842840 - L1MB7 LINE L1 -195 5983 5919 2022 126 0 11 chr2 174845014 174845322 -75842532 + AluSx SINE Alu 1 305 0 2882 150 120 81 chr2 174845322 174845726 -75842128 - L1MB7 LINE L1 -259 5919 5532 258 105 0 0 chr2 174845726 174845764 -75842090 + (TG)n Simple_repeat Simple_repeat 2 39 0 919 188 0 24 chr2 174845765 174845935 -75841919 - FAM SINE Alu -9 166 1 2882 150 120 81 chr2 174845935 174846410 -75841444 - L1MB7 LINE L1 -645 5533 5004 180 0 0 0 chr2 174846590 174846610 -75841244 + (CA)n Simple_repeat Simple_repeat 2 21 0 2500 75 0 0 chr2 174846774 174847080 -75840774 - AluY SINE Alu -5 306 1 735 186 0 16 chr2 174847269 174847398 -75840456 + FLAM_C SINE Alu 1 127 -16 387 0 0 0 chr2 174847624 174847667 -75840187 + (CA)n Simple_repeat Simple_repeat 2 44 0 2169 158 14 3 chr2 174847671 174848033 -75839821 - MER47A DNA MER2_type 0 366 1 201 208 21 0 chr2 174848033 174848081 -75839773 + (TA)n Simple_repeat Simple_repeat 1 49 0 297 340 10 0 chr2 174848209 174848306 -75839548 - MIR SINE MIR -128 134 37 2686 216 99 13 chr2 174848475 174849220 -75838634 - L1ME2 LINE L1 -10 6154 5318 237 65 0 0 chr2 174849220 174849251 -75838603 + (TG)n Simple_repeat Simple_repeat 1 31 0 2686 216 99 13 chr2 174849251 174849430 -75838424 - L1ME2 LINE L1 -846 5318 5156 902 201 5 21 chr2 174850317 174850506 -75837348 - MLT1A1 LTR MaLR 0 365 180 917 234 5 5 chr2 174850530 174850735 -75837119 - MLT1A1 LTR MaLR -160 205 1 23 0 0 0 chr2 174851774 174851797 -75836057 + AT_rich Low_complexity Low_complexity 1 23 0 240 88 0 0 chr2 174852786 174852820 -75835034 + HSMAR1 DNA Mariner 1 34 -1253 692 205 0 8 chr2 174852930 174853052 -75834802 - FLAM_A SINE Alu -12 121 1 2053 135 7 7 chr2 174853328 174853632 -75834222 + AluJb SINE Alu 1 304 -8 27 0 0 0 chr2 174854873 174854900 -75832954 + AT_rich Low_complexity Low_complexity 1 27 0 1677 168 6 43 chr2 174856976 174857298 -75830556 + AluJo SINE Alu 1 310 -2 2365 53 14 0 chr2 174858722 174859006 -75828848 + AluY SINE Alu 4 291 -20 610 139 0 0 chr2 174859028 174859114 -75828740 - AluS SINE Alu -227 86 1 1725 134 61 18 chr2 174860910 174861187 -75826667 - AluJb SINE Alu -23 289 1 2287 87 0 29 chr2 174861840 174862151 -75825703 - AluY SINE Alu -9 302 1 718 183 46 0 chr2 174862317 174862448 -75825406 + FLAM_C SINE Alu 3 139 -4 311 296 68 0 chr2 174862448 174862536 -75825318 - L1ME4a LINE L1 -86 6035 5942 744 263 98 24 chr2 174864641 174865274 -75822580 - L1ME4a LINE L1 -104 6017 5343 962 227 155 79 chr2 174865311 174866963 -75820891 - L1ME3A LINE L1 -32 6138 4316 2845 165 101 109 chr2 174867168 174867744 -75820110 - L1M4 LINE L1 -612 5808 5229 889 169 0 0 chr2 174867744 174867886 -75819968 - FLAM_C SINE Alu -1 142 1 2845 165 101 109 chr2 174867886 174868377 -75819477 - L1M4 LINE L1 -1191 5229 4635 2411 71 7 0 chr2 174868377 174868671 -75819183 - AluSg SINE Alu -14 296 1 2845 165 101 109 chr2 174868671 174868789 -75819065 - L1M4 LINE L1 -1785 4635 4518 950 271 62 62 chr2 174868812 174869269 -75818585 - L1M4 LINE L1 -4185 2378 1922 2115 165 59 3 chr2 174869269 174869644 -75818210 + MSTD LTR MaLR 1 396 0 950 271 62 62 chr2 174869644 174869956 -75817898 - L1M4 LINE L1 -4641 1922 1457 256 146 5 0 chr2 174870050 174870105 -75817749 + AluYa8 SINE Alu 148 188 -112 600 228 41 65 chr2 174870412 174870702 -75817152 - AluSx SINE Alu -19 283 1 570 189 12 14 chr2 174870703 174870834 -75817020 - L1M3de LINE L1 -4606 1959 1438 508 93 0 0 chr2 174870896 174870971 -75816883 + AluSp/q SINE Alu 224 298 -15 2369 58 48 0 chr2 174871030 174871321 -75816533 - AluY SINE Alu -6 305 1 28 29 0 0 chr2 174871323 174871358 -75816496 + AT_rich Low_complexity Low_complexity 1 35 0 182 39 20 78 chr2 174871383 174871434 -75816420 + (TAAA)n Simple_repeat Simple_repeat 3 50 0 1447 197 14 21 chr2 174871442 174871726 -75816128 - AluJo SINE Alu -30 282 1 396 281 176 24 chr2 174871740 174871861 -75815993 - L1ME3A LINE L1 -2838 3308 3207 2210 125 7 0 chr2 174871861 174872164 -75815690 - AluSx SINE Alu -7 305 1 396 281 176 24 chr2 174872164 174872222 -75815632 - L1ME3A LINE L1 -2939 3207 3159 2083 133 10 0 chr2 174872222 174872524 -75815330 - AluSx SINE Alu -7 305 1 396 281 176 24 chr2 174872524 174872553 -75815301 - L1ME3A LINE L1 -2987 3159 3067 258 125 0 0 chr2 174872553 174872601 -75815253 + (TC)n Simple_repeat Simple_repeat 1 48 0 1570 186 3 51 chr2 174872601 174872896 -75814958 - AluJb SINE Alu -31 281 1 1172 234 85 75 chr2 174873000 174873086 -75814768 - L1ME3A LINE L1 -3235 2911 2827 10717 41 8 80 chr2 174873086 174874569 -75813285 - SVA Other Other -3 1383 8 1172 234 85 75 chr2 174874569 174875255 -75812599 - L1ME3A LINE L1 -3319 2827 2131 24 0 0 0 chr2 174875836 174875860 -75811994 + AT_rich Low_complexity Low_complexity 1 24 0 1283 118 53 22 chr2 174875899 174876127 -75811727 - L1MC1 LINE L1 -6 6327 6093 3751 152 6 48 chr2 174876178 174876424 -75811430 - L1MC1 LINE L1 -240 6104 5849 463 192 0 0 chr2 174876424 174876518 -75811336 - FLAM_A SINE Alu 0 138 45 3751 152 6 48 chr2 174876518 174877384 -75810470 - L1MC1 LINE L1 -495 5849 5028 2127 104 0 4 chr2 174877384 174877688 -75810166 - AluSc SINE Alu 0 303 1 3751 152 6 48 chr2 174877688 174877707 -75810147 - L1MC1 LINE L1 -1316 5028 5010 3106 223 63 31 chr2 174877705 174878115 -75809739 - L1MC1 LINE L1 -2771 3375 2979 * 2129 127 0 0 chr2 174878115 174878406 -75809448 - AluSx SINE Alu -18 294 4 3106 223 63 31 chr2 174878406 174879013 -75808841 - L1MC1 LINE L1 -3167 2979 2326 985 207 127 11 chr2 174879017 174879292 -75808562 + MER2 DNA MER2_type 32 338 -7 458 295 105 52 chr2 174879345 174879982 -75807872 - L1M4 LINE L1 -1446 4700 4015 2346 102 3 0 chr2 174879982 174880287 -75807567 - AluSp SINE Alu -7 306 1 458 295 105 52 chr2 174880287 174880412 -75807442 - L1M4 LINE L1 -2131 4015 3898 1763 169 10 3 chr2 174880691 174880981 -75806873 + AluJb SINE Alu 1 292 -20 699 208 46 42 chr2 174881163 174881403 -75806451 - L1MC5 LINE L1 -45 7916 7676 258 136 0 0 chr2 174881457 174881501 -75806353 + (CA)n Simple_repeat Simple_repeat 1 44 0 300 148 16 16 chr2 174881502 174881563 -75806291 - L1MC5 LINE L1 -389 7572 7512 734 204 64 26 chr2 174881637 174881901 -75805953 - L1MC5 LINE L1 -389 7572 7299 1370 65 0 6 chr2 174881928 174882096 -75805758 + AluY SINE Alu 1 167 -144 1416 69 6 0 chr2 174882127 174882302 -75805552 + AluY SINE Alu 122 297 -14 888 179 179 31 chr2 174882302 174882620 -75805234 - L1MC5 LINE L1 -674 7287 6923 2027 131 3 13 chr2 174882633 174882945 -75804909 - AluSx SINE Alu -3 309 1 2972 135 93 52 chr2 174883068 174883254 -75804600 - MER6 DNA MER2_type -56 809 632 1929 121 21 0 chr2 174883254 174883534 -75804320 - AluSq SINE Alu -25 288 3 2972 135 93 52 chr2 174883534 174883946 -75803908 - MER6 DNA MER2_type -233 632 186 1329 165 0 0 chr2 174883947 174884147 -75803707 - AluJo SINE Alu -112 200 1 697 156 193 0 chr2 174884200 174884335 -75803519 - MER46A DNA MER2_type -75 161 1 202 273 23 0 chr2 174884515 174884559 -75803295 - L2 LINE L2 -15 3257 3213 25 65 0 0 chr2 174889007 174889053 -75798801 + AT_rich Low_complexity Low_complexity 1 46 0 225 83 0 0 chr2 174890003 174890039 -75797815 + (A)n Simple_repeat Simple_repeat 1 36 0 838 145 8 0 chr2 174894480 174894611 -75793243 - FLAM_A SINE Alu 0 133 2 1806 136 11 4 chr2 174894880 174895145 -75792709 - AluSx SINE Alu -23 289 23 244 396 19 0 chr2 174895451 174895557 -75792297 + MIR3 SINE MIR 86 193 -15 318 302 151 34 chr2 174896631 174896836 -75791018 + MIR SINE MIR 13 241 -21 2468 57 3 0 chr2 174896886 174897183 -75790671 + AluY SINE Alu 1 298 -13 1967 129 13 10 chr2 174897360 174897662 -75790192 + AluSx SINE Alu 1 303 -9 2011 83 104 4 chr2 174898203 174898481 -75789373 + AluSx SINE Alu 1 306 -6 2149 128 10 0 chr2 174898695 174898991 -75788863 - AluSx SINE Alu -13 299 1 30 27 0 0 chr2 174899154 174899191 -75788663 + AT_rich Low_complexity Low_complexity 1 37 0 702 251 126 22 chr2 174899240 174899471 -75788383 + MER46C DNA MER2_type 80 334 -4 217 217 0 0 chr2 174900073 174900119 -75787735 + GA-rich Low_complexity Low_complexity 2 47 0 207 176 0 0 chr2 174901985 174902019 -75785835 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 192 200 0 0 chr2 174902166 174902216 -75785638 + A-rich Low_complexity Low_complexity 1 50 0 259 233 0 0 chr2 174902261 174902321 -75785533 + (TTCA)n Simple_repeat Simple_repeat 2 61 0 2041 144 0 6 chr2 174904314 174904448 -75783406 + AluSx SINE Alu 1 134 -178 2330 53 7 3 chr2 174904448 174904747 -75783107 + L1PA5 LINE L1 5855 6154 0 2041 144 0 6 chr2 174904747 174904925 -75782929 + AluSx SINE Alu 134 311 -1 387 0 0 0 chr2 174905451 174905494 -75782360 + (TG)n Simple_repeat Simple_repeat 2 44 0 2188 111 3 0 chr2 174905600 174905897 -75781957 + AluSq SINE Alu 1 298 -15 237 298 0 0 chr2 174906126 174906183 -75781671 + L2 LINE L2 3189 3245 -68 22 88 0 0 chr2 174906469 174906526 -75781328 + AT_rich Low_complexity Low_complexity 1 57 0 1974 141 13 3 chr2 174906624 174906922 -75780932 + AluJb SINE Alu 1 301 -11 234 0 0 0 chr2 174907523 174907549 -75780305 + (TG)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr2 174907974 174907996 -75779858 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 174908044 174908066 -75779788 + AT_rich Low_complexity Low_complexity 1 22 0 1413 166 36 10 chr2 175110969 175111313 -75576541 + L1P LINE L1 3544 3903 -2243 212 292 31 0 chr2 175111449 175111545 -75576309 + (GGGTG)n Simple_repeat Simple_repeat 3 101 0 1611 122 52 7 chr2 175111559 175111845 -75576009 - HERVL LTR ERVL -647 5007 4709 443 61 61 0 chr2 175111849 175111915 -75575939 + HERVL LTR ERVL 4842 4911 -743 183 100 0 0 chr2 175111915 175111945 -75575909 + (TA)n Simple_repeat Simple_repeat 1 30 0 205 103 17 52 chr2 175111963 175112021 -75575833 + (TTA)n Simple_repeat Simple_repeat 1 56 0 446 119 0 0 chr2 175112030 175112097 -75575757 + MLT2A1 LTR ERVL 313 379 -65 248 126 63 42 chr2 175112117 175112212 -75575642 + (TTATA)n Simple_repeat Simple_repeat 3 99 0 3859 190 39 39 chr2 175112259 175113347 -75574507 - L1MB3 LINE L1 -7 6176 5099 350 313 27 27 chr2 175113347 175113494 -75574360 - MIR SINE MIR -93 169 23 1281 150 0 5 chr2 175113930 175114130 -75573724 + AluSg/x SINE Alu 82 280 -32 192 125 0 0 chr2 175114504 175114536 -75573318 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 21 0 0 0 chr2 175114557 175114578 -75573276 + AT_rich Low_complexity Low_complexity 1 21 0 293 182 80 23 chr2 175115108 175115196 -75572658 + L1MC/D LINE L1 5728 5820 -1988 406 231 8 34 chr2 175115765 175115882 -75571972 + MIR SINE MIR 31 144 -118 21 71 0 0 chr2 175116272 175116314 -75571540 + AT_rich Low_complexity Low_complexity 1 42 0 383 137 41 0 chr2 175116671 175116744 -75571110 + MLT1C LTR MaLR 3 78 -389 1679 179 58 42 chr2 175116753 175117132 -75570722 - MLT1B LTR MaLR -5 385 1 292 368 92 54 chr2 175118839 175119263 -75568591 - L2 LINE L2 -8 3264 2825 560 175 0 4 chr2 175119945 175120095 -75567759 + MER67C LTR ERV1 198 397 -313 442 132 13 0 chr2 175120165 175120241 -75567613 + MER67D LTR ERV1 432 508 -6 215 281 37 49 chr2 175120781 175120863 -75566991 + MIR3 SINE MIR 7 87 -121 443 269 82 32 chr2 175120906 175121103 -75566751 + MIR SINE MIR 7 205 -57 21 71 0 0 chr2 175122684 175122726 -75565128 + AT_rich Low_complexity Low_complexity 1 42 0 796 216 93 39 chr2 175123091 175123295 -75564559 - MER20 DNA MER1_type -3 216 2 374 360 63 62 chr2 175123320 175123774 -75564080 - L2 LINE L2 0 3272 2748 24 0 0 0 chr2 175125267 175125291 -75562563 + AT_rich Low_complexity Low_complexity 1 24 0 2139 106 3 0 chr2 175125291 175125622 -75562232 + AluSx SINE Alu 1 332 0 623 189 8 0 chr2 175125708 175125840 -75562014 + GA-rich Low_complexity Low_complexity 4 136 0 1778 173 0 7 chr2 175126718 175127007 -75560847 + AluJo SINE Alu 6 292 -20 341 290 11 11 chr2 175127461 175127554 -75560300 + L2 LINE L2 3172 3264 -8 904 229 4 74 chr2 175128065 175128296 -75559558 - MER20 DNA MER1_type -3 216 2 269 278 150 38 chr2 175130231 175130364 -75557490 + L2 LINE L2 3125 3272 0 340 160 0 27 chr2 175131758 175131833 -75556021 - MER69 DNA AcHobo -1079 147 75 297 211 279 0 chr2 175132417 175132521 -75555333 + MER5B DNA MER1_type 2 134 -44 351 0 0 0 chr2 175133209 175133248 -75554606 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 1822 168 7 7 chr2 175133402 175133700 -75554154 + AluJb SINE Alu 2 299 -13 2006 124 31 0 chr2 175134821 175135112 -75552742 + AluSx SINE Alu 3 302 -10 614 212 103 6 chr2 175135319 175135484 -75552370 - MLT1G LTR MaLR 0 590 410 820 191 91 33 chr2 175135507 175135755 -75552099 + MER52C LTR ERV1 13 199 -1079 * 926 236 98 19 chr2 175135752 175136079 -75551775 - MLT1G LTR MaLR -233 320 9 328 213 0 53 chr2 175136213 175136307 -75551547 + MER53 DNA DNA 101 189 0 5316 191 123 13 chr2 175137538 175138910 -75548944 - MER52A LTR ERV1 0 1755 1 237 206 100 14 chr2 175139011 175139101 -75548753 + MLT1G LTR MaLR 454 583 0 464 48 16 0 chr2 175139502 175139565 -75548289 + (CATA)n Simple_repeat Simple_repeat 2 65 0 1897 117 4 11 chr2 175139861 175140142 -75547712 - AluSq SINE Alu 0 313 35 25 0 0 0 chr2 175140365 175140390 -75547464 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 175140507 175140531 -75547323 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr2 175140675 175140716 -75547138 + AT_rich Low_complexity Low_complexity 1 41 0 386 256 124 116 chr2 175141762 175142133 -75545721 + MLT1I LTR MaLR 1 374 -35 186 43 0 0 chr2 175142672 175142695 -75545159 + (TATG)n Simple_repeat Simple_repeat 3 25 0 2151 112 0 26 chr2 175142699 175143004 -75544850 - AluSg SINE Alu -13 297 1 727 286 86 51 chr2 175143058 175143386 -75544468 - L2 LINE L2 -34 3279 2935 3202 112 29 18 chr2 175143386 175143878 -75543976 - LOR1a LTR ERV1 0 497 1 727 286 86 51 chr2 175143878 175143923 -75543931 - L2 LINE L2 -378 2935 2893 1260 191 21 8 chr2 175143959 175144195 -75543659 + MER8 DNA MER2_type 1 239 0 669 298 48 28 chr2 175144255 175144544 -75543310 - LTR16A LTR ERVL 0 450 156 1655 108 44 48 chr2 175144544 175144839 -75543015 + MER39B LTR ERV1 1 294 -359 4453 145 107 27 chr2 175144853 175146236 -75541618 + pTR5 LTR ERV1 776 2438 0 1903 163 19 22 chr2 175146239 175146296 -75541558 + MER39B LTR ERV1 293 349 -304 2184 123 3 0 chr2 175146296 175146596 -75541258 + AluSx SINE Alu 5 305 -7 1903 163 19 22 chr2 175146596 175146900 -75540954 + MER39B LTR ERV1 349 653 0 249 251 5 70 chr2 175147143 175147330 -75540524 + A-rich Low_complexity Low_complexity 4 178 0 202 389 93 0 chr2 175148100 175148208 -75539646 - L3b LINE CR1 -88 1495 1378 2322 87 0 7 chr2 175149764 175150063 -75537791 + AluY SINE Alu 1 297 -14 201 276 52 0 chr2 175150195 175150253 -75537601 + MIR SINE MIR 49 109 -153 1780 233 82 0 chr2 175150287 175150773 -75537081 + MER119 DNA MER1_type 55 580 -3 306 271 121 29 chr2 175150779 175150919 -75536935 + MIR SINE MIR 107 259 -3 2301 109 3 7 chr2 175151038 175151341 -75536513 - AluSx SINE Alu -10 302 1 243 132 0 0 chr2 175151769 175151807 -75536047 + MER119 DNA MER1_type 185 222 -361 1761 165 9 94 chr2 175152074 175152499 -75535355 - MSTD LTR MaLR -7 389 1 324 288 65 59 chr2 175152513 175152666 -75535188 + MIR SINE MIR 92 245 -17 335 217 54 33 chr2 175152750 175152842 -75535012 - MIR SINE MIR -81 181 88 596 210 39 66 chr2 175153187 175153368 -75534486 + MER5B DNA MER1_type 2 177 -1 2325 230 30 18 chr2 175153502 175154065 -75533789 + MER77 LTR ERV1 54 674 -4 199 309 79 29 chr2 175154197 175154336 -75533518 + L2 LINE L2 2920 3065 -248 220 227 364 0 chr2 175155251 175155339 -75532515 + L2 LINE L2 3153 3272 0 1222 223 133 14 chr2 175156221 175156575 -75531279 - MSTD LTR MaLR 0 396 1 24 77 0 0 chr2 175156638 175156690 -75531164 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr2 175158056 175158078 -75529776 + AT_rich Low_complexity Low_complexity 1 22 0 392 259 63 46 chr2 175158693 175158867 -75528987 - MER5B DNA MER1_type -1 177 1 2574 46 0 0 chr2 175160324 175160629 -75527225 + AluY SINE Alu 1 305 -6 1693 156 36 15 chr2 175161099 175161432 -75526422 + MER74C LTR ERVL 3 342 -118 1377 171 71 43 chr2 175161420 175161770 -75526084 + MLT1A2 LTR MaLR 15 374 0 * 1326 78 0 0 chr2 175163197 175163377 -75524477 + (TA)n Simple_repeat Simple_repeat 1 180 0 37 23 0 0 chr2 175163475 175163519 -75524335 + AT_rich Low_complexity Low_complexity 1 44 0 307 108 83 6 chr2 175163522 175163679 -75524175 + (TA)n Simple_repeat Simple_repeat 2 170 0 47 44 0 0 chr2 175163683 175163751 -75524103 + AT_rich Low_complexity Low_complexity 1 68 0 228 124 45 22 chr2 175163758 175163847 -75524007 + (TA)n Simple_repeat Simple_repeat 2 92 0 260 86 95 0 chr2 175164118 175164223 -75523631 + (TA)n Simple_repeat Simple_repeat 2 116 0 2303 112 0 3 chr2 175164442 175164754 -75523100 + AluSx SINE Alu 2 312 0 198 0 0 0 chr2 175164835 175164857 -75522997 + (CA)n Simple_repeat Simple_repeat 1 22 0 408 275 17 34 chr2 175165101 175165279 -75522575 + MER104 DNA Tc2 6 180 0 1992 235 76 39 chr2 175165573 175166138 -75521716 + MLT1E LTR MaLR 1 586 -7 336 271 182 42 chr2 175166309 175166879 -75520975 - L1ME4a LINE L1 -217 5904 5261 405 355 38 7 chr2 175167050 175167340 -75520514 - L1ME4a LINE L1 -1160 4986 4688 229 188 21 0 chr2 175167713 175167761 -75520093 - MLT2B1 LTR ERVL 0 520 472 1823 215 71 47 chr2 175167799 175168093 -75519761 - MLT2B1 LTR ERVL -44 476 165 1035 37 7 29 chr2 175168093 175168229 -75519625 - L1PA3 LINE L1 -4 6151 6019 1823 215 71 47 chr2 175168229 175168399 -75519455 - MLT2B1 LTR ERVL -355 165 1 1743 171 3 23 chr2 175170581 175170890 -75516964 + AluSx SINE Alu 1 303 -9 21 36 0 0 chr2 175172125 175172153 -75515701 + AT_rich Low_complexity Low_complexity 1 28 0 406 246 71 38 chr2 175172165 175172348 -75515506 - L1MC4a LINE L1 -1882 5926 5738 237 33 0 0 chr2 175172450 175172480 -75515374 + (TC)n Simple_repeat Simple_repeat 1 30 0 357 103 17 0 chr2 175172551 175172609 -75515245 - L1MA9 LINE L1 0 6312 6254 2366 81 0 10 chr2 175172727 175173037 -75514817 - AluY SINE Alu -4 307 1 2112 215 91 35 chr2 175173443 175173992 -75513862 - MLT1E2 LTR MaLR -41 585 6 880 254 76 32 chr2 175174390 175174419 -75513435 + L1MD3 LINE L1 7639 7665 -330 2109 125 3 3 chr2 175174419 175174714 -75513140 + AluSx SINE Alu 1 295 -17 880 254 76 32 chr2 175174714 175175026 -75512828 + L1MD3 LINE L1 7665 7995 0 2245 95 14 3 chr2 175175036 175175332 -75512522 + AluSx SINE Alu 1 299 -13 1667 175 7 0 chr2 175176085 175176359 -75511495 + AluSx SINE Alu 21 296 -16 236 131 66 0 chr2 175176628 175176689 -75511165 + (TA)n Simple_repeat Simple_repeat 1 65 0 483 314 98 37 chr2 175176809 175177318 -75510536 + HAL1b LINE L1 394 933 -415 2208 131 0 0 chr2 175177517 175177822 -75510032 + AluSx SINE Alu 1 305 -7 22 56 0 0 chr2 175178952 175178988 -75508866 + AT_rich Low_complexity Low_complexity 1 36 0 309 235 20 51 chr2 175179084 175179182 -75508672 - MLT1K LTR MaLR -123 465 371 423 217 0 11 chr2 175179242 175179334 -75508520 - MLT1K LTR MaLR -339 249 159 200 270 130 20 chr2 175180025 175180125 -75507729 - MIR SINE MIR -92 170 60 279 0 0 0 chr2 175180908 175180939 -75506915 + (CA)n Simple_repeat Simple_repeat 2 32 0 401 36 0 18 chr2 175181043 175181099 -75506755 + (TG)n Simple_repeat Simple_repeat 2 56 0 272 281 61 17 chr2 175181356 175181494 -75506360 + MIR SINE MIR 42 183 -59 2421 62 0 3 chr2 175181763 175182055 -75505799 - AluY SINE Alu -12 299 9 1398 135 0 19 chr2 175182960 175183168 -75504686 + AluSx SINE Alu 18 221 -91 2200 95 14 0 chr2 175183185 175183479 -75504375 + AluSg SINE Alu 1 298 -12 226 228 45 160 chr2 175184785 175184984 -75502870 + MER5B DNA MER1_type 4 189 0 1608 139 6 97 chr2 175185171 175185502 -75502352 + AluJo SINE Alu 1 301 -11 1615 142 0 111 chr2 175186267 175186405 -75501449 + AluJo SINE Alu 1 84 -228 2100 121 0 0 chr2 175186405 175186686 -75501168 - AluSg1 SINE Alu -28 281 1 1615 142 0 111 chr2 175186686 175186872 -75500982 + AluJo SINE Alu 84 289 -23 1854 162 0 16 chr2 175187759 175188085 -75499769 - AluSq SINE Alu 0 313 1 564 364 163 4 chr2 175190030 175190558 -75497296 - HERVL LTR ERVL -934 4830 4219 1126 297 48 55 chr2 175190607 175191186 -75496668 - HERVL LTR ERVL -2883 2881 2307 576 311 72 37 chr2 175191212 175191533 -75496321 - HERVL LTR ERVL -3572 2082 1751 904 309 117 41 chr2 175191764 175192395 -75495459 - HERVL LTR ERVL -3568 1428 750 2299 91 0 0 chr2 175193721 175194008 -75493846 + AluSc SINE Alu 1 287 -22 21 36 0 0 chr2 175194464 175194492 -75493362 + AT_rich Low_complexity Low_complexity 1 28 0 395 287 102 30 chr2 175194662 175194829 -75493025 + MIR SINE MIR 70 248 -14 237 33 0 0 chr2 175194829 175194859 -75492995 + (A)n Simple_repeat Simple_repeat 1 30 0 1522 270 31 7 chr2 175194881 175195337 -75492517 - MLT1C LTR MaLR 0 467 1 25 0 0 0 chr2 175195834 175195859 -75491995 + AT_rich Low_complexity Low_complexity 1 25 0 185 315 139 9 chr2 175196407 175196515 -75491339 + MIR SINE MIR 20 141 -121 1629 228 115 41 chr2 175197142 175197751 -75490103 + MLT1E1 LTR MaLR 1 654 0 226 345 0 0 chr2 175198151 175198206 -75489648 - L2 LINE L2 -10 3262 3208 264 300 109 45 chr2 175198238 175198641 -75489213 + L1MC/D LINE L1 4023 4451 -1695 356 253 87 64 chr2 175198693 175198958 -75488896 + L1MC/D LINE L1 4561 4831 -1315 234 62 0 0 chr2 175199110 175199142 -75488712 + (A)n Simple_repeat Simple_repeat 1 32 0 6027 104 16 0 chr2 175199148 175200617 -75487237 + L1PA13 LINE L1 4670 6161 -2 357 319 69 4 chr2 175200664 175200944 -75486910 + L1MC/D LINE L1 5144 5479 -807 388 300 132 23 chr2 175200960 175201234 -75486620 + L1MC/D LINE L1 5546 5848 -352 6520 87 17 0 chr2 175201985 175203006 -75484848 + L1PA10 LINE L1 5119 6163 -5 2192 94 35 0 chr2 175203116 175203403 -75484451 + AluSp SINE Alu 1 297 -16 1458 305 62 57 chr2 175203457 175204323 -75483531 - HERVL LTR ERVL -3486 2168 1298 449 209 0 0 chr2 175204424 175204510 -75483344 - MER58 DNA MER1_type -2 2418 2333 1453 224 194 14 chr2 175205324 175205833 -75482021 - LTR18B LTR ERVL -13 601 1 2119 122 45 95 chr2 175206537 175206979 -75480875 + LTR32 LTR ERVL 10 429 -42 588 276 0 28 chr2 175207078 175207259 -75480595 + MER5B DNA MER1_type 2 177 -1 251 247 105 93 chr2 175207317 175207479 -75480375 - MER5A DNA MER1_type -22 167 4 344 193 123 187 chr2 175207488 175207617 -75480237 - MER5A DNA MER1_type 0 189 74 2063 117 0 4 chr2 175207617 175207898 -75479956 - AluSx SINE Alu -32 280 1 344 193 123 187 chr2 175207898 175207955 -75479899 - MER5A DNA MER1_type -115 74 15 2208 74 0 58 chr2 175207955 175208267 -75479587 - AluY SINE Alu -17 294 1 2394 78 10 0 chr2 175208391 175208697 -75479157 - AluY SINE Alu -2 309 1 266 80 40 0 chr2 175209108 175209158 -75478696 + MADE1 DNA Mariner 29 80 0 332 161 71 0 chr2 175210126 175210182 -75477672 + LTR40b LTR ERVL 1 60 -402 23 54 0 0 chr2 175210356 175210393 -75477461 + AT_rich Low_complexity Low_complexity 1 37 0 306 0 0 0 chr2 175210768 175210802 -75477052 + (TA)n Simple_repeat Simple_repeat 2 35 0 480 310 48 11 chr2 175210803 175210990 -75476864 - MIR SINE MIR -68 194 1 6319 98 12 0 chr2 175211731 175212889 -75474965 - L1PA14 LINE L1 -2 6159 4996 8847 163 43 3 chr2 175212892 175214649 -75473205 + L1PA14 LINE L1 3164 4990 -1156 2188 96 7 0 chr2 175214921 175215231 -75472623 + AluSq SINE Alu 1 312 0 1171 169 86 0 chr2 175215520 175215775 -75472079 + L1MA6 LINE L1 5937 6213 -87 1229 131 0 0 chr2 175215778 175215946 -75471908 - AluSg/x SINE Alu -7 303 136 216 0 0 0 chr2 175215948 175215972 -75471882 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2047 84 0 62 chr2 175215972 175216280 -75471574 - AluY SINE Alu -22 289 1 690 70 10 0 chr2 175216280 175216380 -75471474 + L1MA5 LINE L1 6198 6298 -2 292 336 24 64 chr2 175216484 175216814 -75471040 + L1MC/D LINE L1 4516 4832 -1314 1321 107 12 128 chr2 175216995 175217237 -75470617 - AluJb SINE Alu -14 298 85 2086 192 34 11 chr2 175217467 175217909 -75469945 - MER66A LTR ERV1 0 478 27 28 0 0 0 chr2 175218073 175218101 -75469753 + AT_rich Low_complexity Low_complexity 1 28 0 901 169 0 0 chr2 175218103 175218245 -75469609 - FRAM SINE Alu -30 146 5 22 0 0 0 chr2 175218347 175218369 -75469485 + AT_rich Low_complexity Low_complexity 1 22 0 2219 78 30 3 chr2 175218428 175218723 -75469131 - AluY SINE Alu -8 303 1 3077 143 14 0 chr2 175218941 175219431 -75468423 - LOR1a LTR ERV1 0 497 1 2268 78 47 0 chr2 175219858 175220154 -75467700 - AluSg SINE Alu 0 310 1 444 276 65 75 chr2 175220235 175220514 -75467340 + L1MC/D LINE L1 4980 5255 -891 366 315 120 38 chr2 175220539 175220615 -75467239 + L1MC/D LINE L1 5467 5535 -2273 2245 108 0 10 chr2 175220615 175220922 -75466932 + AluSp SINE Alu 1 304 -9 366 315 120 38 chr2 175220922 175221029 -75466825 + L1MC/D LINE L1 5535 5665 -2143 1782 110 0 0 chr2 175221335 175221563 -75466291 - AluSg/x SINE Alu -19 293 66 244 109 18 18 chr2 175221838 175221893 -75465961 + (TA)n Simple_repeat Simple_repeat 2 56 0 396 345 14 7 chr2 175222224 175222366 -75465488 + MIR SINE MIR 20 162 -100 359 292 20 15 chr2 175222987 175223182 -75464672 - L1M4 LINE L1 -2237 3909 3714 39837 58 5 1 chr2 175223332 175229446 -75458408 + L1PA5 LINE L1 11 6147 -7 217 51 51 0 chr2 175229446 175229485 -75458369 + (TA)n Simple_repeat Simple_repeat 1 41 0 984 140 0 0 chr2 175229734 175229877 -75457977 + FRAM SINE Alu 18 160 -16 559 220 44 18 chr2 175229941 175230168 -75457686 - L1MC5 LINE L1 -51 7910 7678 1845 217 67 38 chr2 175230174 175230408 -75457446 - L1M LINE L1 -743 5403 5177 2170 131 3 10 chr2 175230408 175230720 -75457134 - AluSq SINE Alu -3 310 1 1845 217 67 38 chr2 175230720 175231141 -75456713 - L1M LINE L1 -969 5177 4762 428 262 57 3 chr2 175231141 175231354 -75456500 - LTR40c LTR ERVL -186 279 1 190 289 174 8 chr2 175231441 175231562 -75456292 - L2 LINE L2 -1633 1681 1541 1457 153 95 0 chr2 175231919 175232193 -75455661 + L1MC1 LINE L1 32 331 -6095 * 6177 135 39 23 chr2 175232191 175232240 -75455614 + L1MC1 LINE L1 5427 5474 -1139 1791 58 18 4 chr2 175232240 175232466 -75455388 + AluY SINE Alu 83 311 0 6177 135 39 23 chr2 175232466 175233575 -75454279 + L1MC1 LINE L1 5474 6613 0 425 311 16 49 chr2 175233996 175234179 -75453675 + MIR SINE MIR 9 185 -77 182 268 0 0 chr2 175234723 175234764 -75453090 + MIR SINE MIR 216 256 -6 388 262 24 70 chr2 175235072 175235370 -75452484 + L1ME4a LINE L1 5614 5897 -224 502 284 133 18 chr2 175236514 175236732 -75451122 - MIR SINE MIR -12 250 8 1043 83 6 51 chr2 175237059 175237215 -75450639 + AluSx SINE Alu 1 149 -164 2348 98 0 0 chr2 175237215 175237521 -75450333 + AluSg SINE Alu 5 310 0 914 186 0 0 chr2 175237534 175237679 -75450175 + AluSx SINE Alu 129 273 -37 2498 62 0 3 chr2 175237796 175238104 -75449750 - AluY SINE Alu -4 307 1 1968 113 46 3 chr2 175238159 175238441 -75449413 - AluSx SINE Alu -16 296 3 2063 109 11 3 chr2 175238887 175239172 -75448682 - AluSx SINE Alu -25 287 1 201 314 95 38 chr2 175239201 175239306 -75448548 - L2 LINE L2 -37 3235 3125 421 292 76 14 chr2 175240399 175240604 -75447250 + MIR SINE MIR 35 249 -13 2156 106 3 31 chr2 175240688 175241008 -75446846 + AluSq SINE Alu 1 311 -2 1337 215 131 15 chr2 175241298 175241702 -75446152 - Charlie1b DNA MER1_type -72 451 1 1930 149 0 26 chr2 175242274 175242583 -75445271 - AluSx SINE Alu -11 301 1 216 214 10 117 chr2 175243716 175243819 -75444035 - MIR SINE MIR -35 227 136 1993 236 65 17 chr2 175243819 175244573 -75443281 + L1M4 LINE L1 2877 3666 -2480 2194 110 9 9 chr2 175244585 175244931 -75442923 + L1MA5 LINE L1 5952 6297 -3 225 293 52 0 chr2 175244931 175244989 -75442865 + MIR SINE MIR 25 85 -177 870 62 0 0 chr2 175244991 175245104 -75442750 - THE1B LTR MaLR -251 113 1 823 106 86 16 chr2 175245232 175245512 -75442342 - THE1C LTR MaLR 0 375 1 867 252 14 5 chr2 175245512 175245726 -75442128 + MIR SINE MIR 44 259 -3 405 335 13 19 chr2 175245760 175245915 -75441939 + MIR3 SINE MIR 41 194 -14 199 267 185 34 chr2 175246192 175246338 -75441516 - L2 LINE L2 -36 3277 3110 2272 117 0 0 chr2 175246657 175246964 -75440890 - AluSc SINE Alu -2 307 1 22 0 0 0 chr2 175246979 175247001 -75440853 + AT_rich Low_complexity Low_complexity 1 22 0 2767 168 34 15 chr2 175247001 175247589 -75440265 - L1MA9 LINE L1 -22 6290 5692 434 365 6 6 chr2 175247589 175247770 -75440084 + L2 LINE L2 2527 2707 -607 2945 245 200 14 chr2 175248084 175249278 -75438576 + L1MC4 LINE L1 6488 7903 -139 2390 97 0 0 chr2 175249317 175249625 -75438229 - AluY SINE Alu -3 308 1 388 333 101 35 chr2 175249628 175249886 -75437968 + L2 LINE L2 2695 2969 -345 208 173 96 19 chr2 175250061 175250113 -75437741 + L2 LINE L2 3168 3223 -49 1962 129 0 0 chr2 175250149 175250405 -75437449 + AluSq SINE Alu 34 289 -24 557 322 66 10 chr2 175250487 175250788 -75437066 + L2 LINE L2 1638 1955 -1359 385 282 91 0 chr2 175250893 175251003 -75436851 - L2 LINE L2 -1 3312 3193 237 311 311 7 chr2 175251023 175251328 -75436526 + L2 LINE L2 2111 2508 -806 1982 131 24 0 chr2 175251336 175251626 -75436228 - AluSx SINE Alu -15 297 1 183 288 184 18 chr2 175251668 175251831 -75436023 + L2 LINE L2 2632 2821 -493 543 265 230 0 chr2 175251907 175252103 -75435751 + MIR SINE MIR 1 241 -21 29 60 0 0 chr2 175255837 175255887 -75431967 + AT_rich Low_complexity Low_complexity 1 50 0 1828 141 7 7 chr2 175256013 175256296 -75431558 - AluSx SINE Alu -2 310 28 1540 176 134 0 chr2 175257188 175257494 -75430360 + MER7A DNA MER2_type 1 345 -1 657 294 5 31 chr2 175258055 175258249 -75429605 + MER58A DNA MER1_type 1 189 -35 489 228 76 18 chr2 175258336 175258507 -75429347 + L1MD3 LINE L1 7796 7976 -19 24 32 0 0 chr2 175258761 175258792 -75429062 + AT_rich Low_complexity Low_complexity 1 31 0 734 263 98 3 chr2 175258890 175259175 -75428679 - MER46C DNA MER2_type -14 324 13 1530 123 12 12 chr2 175259425 175259669 -75428185 + AluSx SINE Alu 1 244 -68 2221 123 0 19 chr2 175259805 175260114 -75427740 - AluSq SINE Alu -10 303 1 794 98 273 0 chr2 175260667 175260810 -75427044 - HSMAR2 DNA Mariner -319 983 802 26 30 0 0 chr2 175261223 175261256 -75426598 + AT_rich Low_complexity Low_complexity 1 33 0 5283 144 61 11 chr2 175261671 175262648 -75425206 + Tigger1 DNA MER2_type 1 1026 -1392 * 5641 105 32 77 chr2 175262646 175263531 -75424323 + Tigger1 DNA MER2_type 1383 2213 -205 1507 171 43 8 chr2 175263531 175263789 -75424065 - AluJo SINE Alu -45 267 1 5641 105 32 77 chr2 175263789 175263987 -75423867 + Tigger1 DNA MER2_type 2213 2418 0 30 0 0 0 chr2 175264493 175264523 -75423331 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr2 175265150 175265177 -75422677 + AT_rich Low_complexity Low_complexity 1 27 0 2216 106 0 0 chr2 175265924 175266216 -75421638 - AluSx SINE Alu -19 293 2 248 292 115 0 chr2 175267157 175267287 -75420567 - L2 LINE L2 -18 3295 3151 276 91 0 0 chr2 175269078 175269122 -75418732 + (TG)n Simple_repeat Simple_repeat 2 45 0 326 343 101 14 chr2 175269381 175269600 -75418254 - L1M4 LINE L1 -3054 3092 2855 253 266 101 22 chr2 175269883 175270022 -75417832 - L1M4 LINE L1 -3569 2577 2428 471 254 0 35 chr2 175270167 175270281 -75417573 + MER5B DNA MER1_type 20 129 -49 1889 264 93 27 chr2 175270286 175270551 -75417303 - L1M4 LINE L1 -2413 4231 3985 432 0 0 0 chr2 175270551 175270599 -75417255 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 1889 264 93 27 chr2 175270599 175271987 -75415867 - L1M4 LINE L1 -2659 3985 2488 443 167 56 0 chr2 175272119 175272209 -75415645 - L1ME3 LINE L1 -20 6142 6048 397 244 103 20 chr2 175272209 175272436 -75415418 - L1M4 LINE L1 -4832 1710 1508 24 53 0 0 chr2 175272828 175272866 -75414988 + AT_rich Low_complexity Low_complexity 1 38 0 2228 105 0 0 chr2 175273518 175273813 -75414041 - AluSq SINE Alu -13 300 6 237 180 0 0 chr2 175274363 175274413 -75413441 + (TG)n Simple_repeat Simple_repeat 2 51 0 832 310 39 0 chr2 175274414 175274672 -75413182 + L2 LINE L2 2274 2541 -773 267 315 135 0 chr2 175274874 175275102 -75412752 - L1ME3 LINE L1 -536 5585 5543 2466 70 0 0 chr2 175275306 175275608 -75412246 - AluY SINE Alu -9 302 1 508 50 10 40 chr2 175275932 175276033 -75411821 + (TA)n Simple_repeat Simple_repeat 2 99 0 511 64 0 39 chr2 175277562 175277640 -75410214 - MADE1 DNA Mariner 0 80 6 22 35 0 0 chr2 175278188 175278217 -75409637 + AT_rich Low_complexity Low_complexity 1 29 0 200 240 73 10 chr2 175278579 175278675 -75409179 + (TATATG)n Simple_repeat Simple_repeat 6 107 0 307 264 54 78 chr2 175278767 175278934 -75408920 - L1MC4a LINE L1 -1941 5867 5705 1913 132 13 23 chr2 175278958 175279262 -75408592 - AluSx SINE Alu -11 301 1 266 290 61 39 chr2 175279315 175279577 -75408277 - L1MC4a LINE L1 -537 5584 5318 2087 140 0 10 chr2 175279605 175279919 -75407935 - AluSx SINE Alu -1 311 1 432 349 140 13 chr2 175281381 175281610 -75406244 - MIR SINE MIR -1 261 4 535 269 0 0 chr2 175281904 175282008 -75405846 + L2 LINE L2 3206 3309 -4 219 355 85 48 chr2 175282018 175282266 -75405588 + L2 LINE L2 2807 3063 -209 217 364 53 23 chr2 175282326 175282458 -75405396 - L2 LINE L2 -15 3257 3122 21 0 0 0 chr2 175282458 175282479 -75405375 + AT_rich Low_complexity Low_complexity 1 21 0 8268 40 0 2 chr2 175282484 175282514 -75405340 - L1P LINE L1 -2997 3149 3120 17990 33 3 0 chr2 175282514 175285459 -75402395 - L1PA3 LINE L1 -4 6151 3196 8268 40 0 2 chr2 175285459 175286467 -75401387 - L1P LINE L1 -3026 3120 2113 1510 188 86 6 chr2 175286499 175286823 -75401031 - MLT1F1 LTR MaLR -1 566 217 257 329 27 34 chr2 175286824 175286973 -75400881 - L2 LINE L2 -736 2578 2431 440 339 165 22 chr2 175287006 175287296 -75400558 - L2 LINE L2 -622 2692 2326 1518 137 31 137 chr2 175287296 175287683 -75400171 - MER7A DNA MER2_type -2 344 1 440 339 165 22 chr2 175287683 175287799 -75400055 - L2 LINE L2 -988 2326 2228 2287 82 10 7 chr2 175287903 175288206 -75399648 - AluSc SINE Alu -5 304 1 22 35 0 0 chr2 175288976 175289005 -75398849 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 175289081 175289109 -75398745 + AT_rich Low_complexity Low_complexity 1 28 0 1169 244 123 16 chr2 175289525 175290038 -75397816 + L1MC5 LINE L1 7330 7897 -64 219 313 0 0 chr2 175290076 175290143 -75397711 + A-rich Low_complexity Low_complexity 3 69 0 2391 92 0 0 chr2 175290354 175290659 -75397195 - AluY SINE Alu -6 305 1 595 290 51 7 chr2 175290755 175290969 -75396885 + MIR SINE MIR 44 262 0 374 143 0 0 chr2 175292856 175292912 -75394942 + Tigger4(Zombi) DNA MER2_type 1 56 -2675 * 569 111 259 0 chr2 175292908 175293016 -75394838 + Tigger4(Zombi) DNA MER2_type 2596 2731 0 1324 144 182 8 chr2 175293479 175293715 -75394139 - AluSg1 SINE Alu -30 279 3 24 0 0 0 chr2 175294630 175294654 -75393200 + AT_rich Low_complexity Low_complexity 1 24 0 439 244 25 153 chr2 175294826 175295101 -75392753 - MIR SINE MIR -3 259 20 228 257 60 112 chr2 175295264 175295513 -75392341 - L2 LINE L2 -896 2418 2183 653 228 161 33 chr2 175296529 175296740 -75391114 + MER8 DNA MER2_type 1 238 -1 206 305 68 0 chr2 175297271 175297330 -75390524 + L2 LINE L2 3203 3265 -48 258 296 291 29 chr2 175298285 175298911 -75388943 - L2 LINE L2 -706 2608 1819 478 341 41 34 chr2 175300835 175301371 -75386483 - HERVK14C LTR ERVK -315 6522 5983 265 277 53 23 chr2 175302478 175302669 -75385185 - HERVK14C LTR ERVK -2327 5090 4906 253 271 0 0 chr2 175302808 175302867 -75384987 - HERVK14C LTR ERVK -2790 4962 4904 297 284 0 0 chr2 175303050 175303138 -75384716 - HERVK14C LTR ERVK -3003 4749 4662 36980 90 12 10 chr2 175305604 175309421 -75378433 - L1PA6 LINE L1 0 6154 2324 279 0 0 0 chr2 175309421 175309452 -75378402 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 36980 90 12 10 chr2 175309452 175311771 -75376083 - L1PA6 LINE L1 -3830 2324 11 2081 162 71 44 chr2 175312429 175312924 -75374930 + L1MB8 LINE L1 5671 6178 0 695 220 37 64 chr2 175314066 175314284 -75373570 - MER58C DNA MER1_type -1 214 3 749 189 0 8 chr2 175316241 175316368 -75371486 + FLAM_A SINE Alu 1 126 -7 2318 169 31 5 chr2 175316944 175317359 -75370495 + MSTB LTR MaLR 1 426 0 9828 80 49 4 chr2 175317749 175319953 -75367901 - L1PA7 LINE L1 -1 6153 3880 1924 152 13 0 chr2 175320825 175321128 -75366726 + AluSx SINE Alu 1 307 -5 195 368 46 0 chr2 175321189 175321276 -75366578 + L2 LINE L2 3154 3244 -28 355 301 57 31 chr2 175322366 175322559 -75365295 + L1MC5 LINE L1 7408 7605 -356 1637 167 33 39 chr2 175323555 175323915 -75363939 + MLT1A1 LTR MaLR 1 358 -7 1902 146 0 3 chr2 175324417 175324711 -75363143 + AluJb SINE Alu 1 293 -19 3236 174 72 8 chr2 175325681 175326007 -75361847 - L1MB2 LINE L1 0 6171 5867 2125 119 3 0 chr2 175326007 175326300 -75361554 - AluSx SINE Alu -18 294 1 3236 174 72 8 chr2 175326300 175326685 -75361169 - L1MB2 LINE L1 -304 5867 5415 2243 109 0 10 chr2 175327283 175327586 -75360268 + AluSq SINE Alu 1 300 -13 1089 250 68 59 chr2 175329566 175330141 -75357713 - L2 LINE L2 -6 3307 2757 673 227 137 56 chr2 175330171 175330521 -75357333 - MER57A LTR ERV1 0 403 49 380 249 278 24 chr2 175330570 175330594 -75357260 + HAL1 LINE L1 1436 1453 -1054 410 0 0 20 chr2 175330594 175330645 -75357209 + (CA)n Simple_repeat Simple_repeat 2 51 0 380 249 278 24 chr2 175330645 175331001 -75356853 + HAL1 LINE L1 1453 1913 -594 316 229 128 0 chr2 175331521 175331630 -75356224 - Charlie8 DNA MER1_type -2289 128 6 2930 261 121 46 chr2 175332056 175332966 -75354888 + L1MC4a LINE L1 5589 6430 -1378 828 213 66 10 chr2 175332966 175333163 -75354691 - MER63A DNA MER1_type -2 208 1 2930 261 121 46 chr2 175333163 175333996 -75353858 + L1MC4a LINE L1 6430 7462 -346 1870 227 102 49 chr2 175334005 175334189 -75353665 + L1ME1 LINE L1 5325 5498 -668 2424 101 0 0 chr2 175334189 175334496 -75353358 + AluSq SINE Alu 1 307 -6 1870 227 102 49 chr2 175334496 175334771 -75353083 + L1ME1 LINE L1 5498 5757 -409 1783 194 0 16 chr2 175334771 175335080 -75352774 + AluJo SINE Alu 1 304 -8 1870 227 102 49 chr2 175335080 175335368 -75352486 + L1ME1 LINE L1 5757 6112 -54 470 259 13 6 chr2 175335266 175335424 -75352430 + L1MA10 LINE L1 6169 6327 -7 * 1473 192 34 3 chr2 175335544 175335841 -75352013 + MER2 DNA MER2_type 40 345 0 559 225 19 108 chr2 175335901 175336208 -75351646 + L1MC4 LINE L1 7698 7977 -65 730 265 53 26 chr2 175337315 175337417 -75350437 + MIR SINE MIR 45 156 -106 1691 132 96 12 chr2 175337417 175337750 -75350104 - MER46B DNA MER2_type 0 236 1 730 265 53 26 chr2 175337750 175337836 -75350018 + MIR SINE MIR 156 238 -24 274 205 252 64 chr2 175338907 175339141 -75348713 - L2 LINE L2 -4 3309 3032 292 235 31 112 chr2 175340121 175340265 -75347589 - L1MC5 LINE L1 -50 7911 7786 2314 120 0 0 chr2 175340265 175340574 -75347280 - AluSg SINE Alu -1 309 1 292 235 31 112 chr2 175340574 175340625 -75347229 - L1MC5 LINE L1 -175 7786 7732 2832 213 22 11 chr2 175340625 175341246 -75346608 + MER82 DNA MER2_type 1 628 -25 2070 123 33 3 chr2 175341379 175341712 -75346142 - L1PA16 LINE L1 -8 6158 5816 961 227 7 9 chr2 175341872 175342172 -75345682 + MER2 DNA MER2_type 7 344 -1 429 293 166 12 chr2 175344147 175344400 -75343454 + L2 LINE L2 1864 2155 -1159 1211 312 53 30 chr2 175344403 175345058 -75342796 + L2 LINE L2 2361 3033 -280 2070 145 0 0 chr2 175345400 175345697 -75342157 - AluSg SINE Alu -13 297 1 269 301 41 89 chr2 175345993 175346139 -75341715 + L2 LINE L2 3134 3272 0 218 70 18 70 chr2 175346182 175346239 -75341615 + (GAAA)n Simple_repeat Simple_repeat 4 57 0 2226 116 0 3 chr2 175348241 175348534 -75339320 - AluSq SINE Alu -21 292 1 1449 190 71 4 chr2 175348733 175349001 -75338853 - AluJo SINE Alu -26 286 1 705 172 70 6 chr2 175349364 175349521 -75338333 + MER5A DNA MER1_type 1 167 -22 353 288 119 25 chr2 175349545 175349705 -75338149 - MER5B DNA MER1_type -3 175 1 22 0 0 0 chr2 175352437 175352459 -75335395 + AT_rich Low_complexity Low_complexity 1 22 0 216 196 39 20 chr2 175352591 175352642 -75335212 - MIR SINE MIR -92 170 119 1685 161 43 10 chr2 175352921 175353220 -75334634 - AluJb SINE Alu -2 310 2 1888 132 7 26 chr2 175356293 175356596 -75331258 - AluSx SINE Alu -15 297 1 1419 186 99 4 chr2 175357109 175357254 -75330600 - AluJb SINE Alu -24 288 158 203 0 37 0 chr2 175357254 175357281 -75330573 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 1419 186 99 4 chr2 175357281 175357398 -75330456 - AluJb SINE Alu -154 158 1 3260 106 130 94 chr2 175357655 175357725 -75330129 - LTR8 LTR ERV1 0 691 625 2303 109 0 13 chr2 175357725 175358038 -75329816 + AluSc SINE Alu 1 309 0 3260 106 130 94 chr2 175358038 175358634 -75329220 - LTR8 LTR ERV1 -66 625 1 1198 329 86 21 chr2 175360138 175360936 -75326918 + L2 LINE L2 2211 3055 -217 406 213 5 152 chr2 175360947 175361144 -75326710 - MER69 DNA AcHobo -9 2517 1 351 43 0 0 chr2 175361212 175361258 -75326596 - MADE1 DNA Mariner -34 46 1 1850 153 0 0 chr2 175362339 175362607 -75325247 + AluSx SINE Alu 39 306 -6 1092 224 5 14 chr2 175364107 175364330 -75323524 + MER58A DNA MER1_type 1 221 -3 530 115 52 10 chr2 175364903 175364999 -75322855 + HY3 scRNA scRNA 1 100 -1 26 0 0 0 chr2 175364999 175365025 -75322829 + AT_rich Low_complexity Low_complexity 1 26 0 205 371 0 0 chr2 175365499 175365569 -75322285 - MIR SINE MIR -115 93 24 211 216 0 0 chr2 175365953 175366004 -75321850 + T-rich Low_complexity Low_complexity 1 51 0 28 0 0 0 chr2 175367415 175367443 -75320411 + AT_rich Low_complexity Low_complexity 1 28 0 182 373 0 30 chr2 175367537 175367604 -75320250 + MIR SINE MIR 13 77 -185 25 31 0 0 chr2 175368274 175368306 -75319548 + AT_rich Low_complexity Low_complexity 1 32 0 902 210 73 26 chr2 175369371 175369643 -75318211 - MER65B LTR ERV1 -16 515 231 389 186 35 12 chr2 175369688 175369774 -75318080 - MER65C LTR ERV1 -373 88 1 833 177 7 7 chr2 175369791 175369938 -75317916 - FRAM SINE Alu -30 146 1 486 150 12 0 chr2 175370197 175370277 -75317577 - Tigger5 DNA MER2_type 0 2323 2243 254 164 73 18 chr2 175370277 175370332 -75317522 - Tigger5 DNA MER2_type -23 2300 2243 237 289 0 0 chr2 175370313 175370365 -75317489 - Tigger5 DNA MER2_type -2270 53 2 * 205 186 0 0 chr2 175370600 175370643 -75317211 + A-rich Low_complexity Low_complexity 6 48 0 201 121 30 0 chr2 175372272 175372305 -75315549 - L2 LINE L2 -73 3240 3207 582 241 171 6 chr2 175372461 175372619 -75315235 - MER5A DNA MER1_type -2 187 4 456 287 121 17 chr2 175372627 175372801 -75315053 + MIR SINE MIR 27 218 -44 241 167 0 0 chr2 175374236 175374272 -75313582 + MLT1J LTR MaLR 100 135 -376 436 221 99 93 chr2 175374303 175374475 -75313379 + MLT1J LTR MaLR 231 403 -108 22 0 0 0 chr2 175377699 175377721 -75310133 + AT_rich Low_complexity Low_complexity 1 22 0 248 265 44 0 chr2 175378571 175378639 -75309215 + MIR SINE MIR 160 230 -32 241 180 20 0 chr2 175380014 175380064 -75307790 - MADE1 DNA Mariner 0 80 30 1736 159 3 42 chr2 175380418 175380726 -75307128 + AluJb SINE Alu 1 296 -16 26 0 0 0 chr2 175381693 175381719 -75306135 + AT_rich Low_complexity Low_complexity 1 26 0 29 28 0 0 chr2 175383476 175383512 -75304342 + AT_rich Low_complexity Low_complexity 1 36 0 201 345 0 0 chr2 175383534 175383589 -75304265 + L2 LINE L2 2256 2310 -1004 340 256 58 0 chr2 175383794 175383880 -75303974 - L2 LINE L2 0 3272 3182 353 274 84 45 chr2 175384113 175384292 -75303562 - L2 LINE L2 -1221 2093 1908 759 338 159 34 chr2 175384298 175385111 -75302743 - L2 LINE L2 -1747 1567 654 204 40 0 0 chr2 175385395 175385420 -75302434 + (CAA)n Simple_repeat Simple_repeat 2 26 0 841 247 77 47 chr2 175385481 175385725 -75302129 + L1ME2 LINE L1 5778 6013 -321 2385 43 3 3 chr2 175385725 175386035 -75301819 + AluY SINE Alu 1 310 0 841 247 77 47 chr2 175386035 175386168 -75301686 + L1ME2 LINE L1 6013 6334 0 5413 145 35 25 chr2 175386857 175387974 -75299880 - L1MA4 LINE L1 -5 6295 5157 2323 112 0 0 chr2 175388128 175388440 -75299414 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 175389391 175389412 -75298442 + AT_rich Low_complexity Low_complexity 1 21 0 440 228 153 21 chr2 175390630 175390819 -75297035 + L1ME3 LINE L1 5704 5917 -245 753 181 0 8 chr2 175391988 175392115 -75295739 + FLAM_A SINE Alu 1 126 -7 2310 169 31 5 chr2 175392691 175393106 -75294748 + MSTB LTR MaLR 1 426 0 36925 89 15 12 chr2 175393497 175397309 -75290545 - L1PA7 LINE L1 0 6154 2318 261 0 0 0 chr2 175397309 175397338 -75290516 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 36925 89 15 12 chr2 175397338 175399654 -75288200 - L1PA7 LINE L1 -3836 2318 11 2081 162 71 44 chr2 175400311 175400806 -75287048 + L1MB8 LINE L1 5671 6178 0 695 220 37 64 chr2 175401948 175402166 -75285688 - MER58C DNA MER1_type -1 214 3 2813 238 88 48 chr2 175403586 175404845 -75283009 + L1ME1 LINE L1 789 2044 -4362 2938 232 77 17 chr2 175404899 175405845 -75282009 + L1ME1 LINE L1 2339 3331 -3075 2017 140 14 0 chr2 175405845 175406138 -75281716 + AluSx SINE Alu 1 297 -15 2938 232 77 17 chr2 175406138 175406286 -75281568 + L1ME1 LINE L1 3331 3469 -2937 * 2979 225 84 21 chr2 175406284 175407093 -75280761 + L1ME1 LINE L1 5515 6374 -52 28 0 0 0 chr2 175407134 175407162 -75280692 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 175407574 175407603 -75280251 + AT_rich Low_complexity Low_complexity 1 29 0 379 351 54 39 chr2 175408887 175409093 -75278761 - L2 LINE L2 -644 2670 2456 2156 114 14 0 chr2 175409093 175409390 -75278464 + AluSx SINE Alu 1 301 -11 379 351 54 39 chr2 175409390 175409519 -75278335 - L2 LINE L2 -858 2456 2330 364 224 51 20 chr2 175409779 175409877 -75277977 + MIR SINE MIR 53 153 -109 2342 52 45 0 chr2 175460241 175460530 -75227324 - AluY SINE Alu -9 302 1 285 344 16 24 chr2 175460971 175461096 -75226758 - L2 LINE L2 0 3272 3149 192 40 0 0 chr2 175461438 175461463 -75226391 + (TTA)n Simple_repeat Simple_repeat 1 25 0 634 276 29 6 chr2 175462090 175462264 -75225590 - MIR SINE MIR -14 248 71 622 280 68 65 chr2 175463359 175463695 -75224159 + MLT1J LTR MaLR 3 339 -172 213 39 0 0 chr2 175463851 175463877 -75223977 + (TA)n Simple_repeat Simple_repeat 2 27 0 1504 193 4 4 chr2 175463877 175464136 -75223718 - AluJb SINE Alu -28 284 26 23 0 0 0 chr2 175464175 175464198 -75223656 + AT_rich Low_complexity Low_complexity 1 23 0 2053 84 46 0 chr2 175464449 175464733 -75223121 - AluYa5 SINE Alu -12 299 3 2192 114 0 25 chr2 175465036 175465351 -75222503 + AluSg SINE Alu 4 310 0 31 0 0 0 chr2 175466604 175466635 -75221219 + AT_rich Low_complexity Low_complexity 1 31 0 270 336 91 19 chr2 175467189 175467397 -75220457 + L3 LINE CR1 1104 1326 -251 38600 33 4 1 chr2 175467591 175473067 -75214787 + L1PA3 LINE L1 670 6153 -2 1833 250 42 28 chr2 175473130 175473702 -75214152 - L1ME3A LINE L1 -147 6023 5444 388 333 87 19 chr2 175473702 175473909 -75213945 + L2 LINE L2 2687 2907 -407 21 36 0 0 chr2 175474666 175474694 -75213160 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr2 175474822 175474859 -75212995 + AT_rich Low_complexity Low_complexity 1 37 0 1795 175 0 0 chr2 175475377 175475696 -75212158 - AluJb SINE Alu 0 324 6 621 165 18 0 chr2 175475867 175475976 -75211878 - AluSx SINE Alu -10 299 189 1229 56 0 0 chr2 175475976 175476118 -75211736 - AluSx SINE Alu -171 142 1 285 135 43 172 chr2 175476219 175476382 -75211472 - Charlie7 DNA MER1_type -56 2556 2415 * 839 264 94 25 chr2 175476372 175476777 -75211077 - Charlie7 DNA MER1_type -1889 723 291 2288 97 3 3 chr2 175477136 175477447 -75210407 - AluSx SINE Alu -1 311 1 502 295 95 16 chr2 175478427 175478617 -75209237 - MIR SINE MIR -44 218 14 316 333 40 0 chr2 175478636 175478762 -75209092 + L3 LINE CR1 1446 1576 -1 228 379 31 19 chr2 175478993 175479154 -75208700 + L2 LINE L2 2593 2755 -559 326 380 29 29 chr2 175479311 175479482 -75208372 + L2 LINE L2 2926 3096 -176 1669 114 5 0 chr2 175479602 175479822 -75208032 + AluSx SINE Alu 2 222 -90 6131 52 11 14 chr2 175479822 175480604 -75207250 - LTR17 LTR ERV1 0 780 1 617 92 0 0 chr2 175480604 175480691 -75207163 + AluSx SINE Alu 219 305 -7 469 289 33 13 chr2 175481307 175481459 -75206395 + L2 LINE L2 7 161 -3153 1067 295 118 12 chr2 175481501 175481908 -75205946 + L2 LINE L2 350 799 -2515 921 290 106 19 chr2 175482090 175482504 -75205350 + MLT1J2 LTR MaLR 1 450 0 957 276 70 19 chr2 175487610 175487983 -75199871 - LTR33A LTR ERVL 0 523 132 32 0 0 0 chr2 175488127 175488159 -75199695 + AT_rich Low_complexity Low_complexity 1 32 0 390 363 62 0 chr2 175491557 175491750 -75196104 - MIR SINE MIR -12 250 46 302 302 117 1 chr2 175491776 175491891 -75195963 - MIR SINE MIR -68 140 16 22 70 0 0 chr2 175492328 175492371 -75195483 + AT_rich Low_complexity Low_complexity 1 43 0 288 0 0 0 chr2 175492714 175492746 -75195108 + (CTG)n Simple_repeat Simple_repeat 2 33 0 2165 106 10 0 chr2 175492746 175493048 -75194806 - AluSq SINE Alu -8 305 1 272 313 27 36 chr2 175493967 175494079 -75193775 - L2 LINE L2 -378 2935 2825 463 342 148 30 chr2 175494736 175495134 -75192720 - L2 LINE L2 0 3272 2828 666 312 77 7 chr2 175495197 175495474 -75192380 + L2 LINE L2 2722 3030 -283 2958 70 0 0 chr2 175495474 175495859 -75191995 - L1PA7 LINE L1 -4 6150 5766 666 312 77 7 chr2 175495859 175495951 -75191903 + L2 LINE L2 3030 3114 -199 1135 260 73 66 chr2 175495952 175496516 -75191338 - MLT1H1 LTR MaLR -2 553 1 462 256 12 69 chr2 175496542 175496702 -75191152 + L2 LINE L2 3163 3313 0 319 268 102 13 chr2 175497569 175497726 -75190128 + L1ME4a LINE L1 4268 4438 -1708 341 269 146 15 chr2 175497743 175497873 -75189981 + MIR SINE MIR 10 156 -106 395 317 107 66 chr2 175497936 175498514 -75189340 + L1ME4a LINE L1 4732 5333 -813 471 299 146 37 chr2 175498598 175499002 -75188852 + L1ME4a LINE L1 5447 5894 -227 322 151 86 21 chr2 175499054 175499147 -75188707 + L1ME4a LINE L1 6022 6120 -1 250 259 23 69 chr2 175499555 175499686 -75188168 - HAL1b LINE L1 -432 916 792 1797 164 13 0 chr2 175499799 175500097 -75187757 - AluSx SINE Alu -10 302 1 1130 195 26 65 chr2 175500111 175500156 -75187698 - L1MB7 LINE L1 -9 6175 6130 2110 57 54 14 chr2 175500156 175500452 -75187402 - AluY SINE Alu -2 309 2 1130 195 26 65 chr2 175500452 175500714 -75187140 - L1MB7 LINE L1 -54 6130 5880 25 31 0 0 chr2 175500714 175500746 -75187108 + AT_rich Low_complexity Low_complexity 1 32 0 1305 155 48 0 chr2 175500754 175501006 -75186848 - L1MA5A LINE L1 -10 6287 6024 240 290 11 0 chr2 175501013 175501077 -75186777 - L1MB7 LINE L1 -309 5875 5808 2588 82 3 0 chr2 175501077 175501419 -75186435 + L1PA6 LINE L1 5805 6147 -7 240 290 11 0 chr2 175501419 175501447 -75186407 - L1MB7 LINE L1 -376 5808 5782 4045 208 71 16 chr2 175501538 175502819 -75185035 - L1MCa LINE L1 -3653 2773 1252 459 289 150 5 chr2 175502824 175503011 -75184843 - L1MCa LINE L1 -6148 459 246 594 269 76 95 chr2 175503030 175503167 -75184687 - L1MEd LINE L1 -4868 1251 1113 1988 137 73 12 chr2 175503167 175503510 -75184344 - THE1B LTR MaLR 0 364 1 11556 103 2 2 chr2 175503510 175505089 -75182765 - THE1B-int LTR MaLR 0 1580 1 2126 136 48 14 chr2 175505089 175505441 -75182413 - THE1B LTR MaLR 0 364 1 594 269 76 95 chr2 175505441 175505544 -75182310 - L1MEd LINE L1 -5004 1115 1012 1613 168 16 59 chr2 175505544 175505723 -75182131 - AluJb SINE Alu -4 308 148 528 93 0 0 chr2 175505723 175505798 -75182056 + (TA)n Simple_repeat Simple_repeat 2 76 0 1613 168 16 59 chr2 175505798 175505940 -75181914 - AluJb SINE Alu -164 148 1 594 269 76 95 chr2 175505940 175506171 -75181683 - L1MEd LINE L1 -5107 1012 786 546 355 60 35 chr2 175506247 175506785 -75181069 - L1MEd LINE L1 -5356 763 213 357 331 0 27 chr2 175506795 175506943 -75180911 - L1MEd LINE L1 -5965 154 11 306 344 21 0 chr2 175507050 175507146 -75180708 - HAL1 LINE L1 -590 1917 1820 1326 99 66 9 chr2 175507371 175507689 -75180165 - MSTA LTR MaLR 0 428 1 815 262 57 9 chr2 175507906 175508135 -75179719 - MIR SINE MIR 0 262 23 480 285 53 13 chr2 175509342 175509493 -75178361 + MIR SINE MIR 106 262 0 221 171 0 24 chr2 175509791 175509832 -75178022 + CT-rich Low_complexity Low_complexity 1 40 0 23 33 0 0 chr2 175514171 175514201 -75173653 + AT_rich Low_complexity Low_complexity 1 30 0 183 324 29 0 chr2 175514974 175515042 -75172812 + L2 LINE L2 2701 2770 -544 354 294 26 20 chr2 175515224 175515377 -75172477 + MER20B DNA MER1_type 26 179 -604 324 375 73 33 chr2 175515422 175515667 -75172187 + L2 LINE L2 3018 3272 0 190 347 0 42 chr2 175515890 175515962 -75171892 - MIR SINE MIR -160 102 34 623 218 11 80 chr2 175516063 175516251 -75171603 + MLT1D LTR MaLR 1 175 -330 859 140 11 17 chr2 175516272 175516451 -75171403 + CT-rich Low_complexity Low_complexity 1 178 0 1624 184 47 7 chr2 175516455 175516754 -75171100 - AluJb SINE Alu -1 311 1 970 208 109 21 chr2 175516778 175517067 -75170787 + MLT1D LTR MaLR 206 505 0 534 43 0 0 chr2 175517119 175517188 -75170666 + (CA)n Simple_repeat Simple_repeat 2 70 0 245 280 13 13 chr2 175517667 175517742 -75170112 + MIR SINE MIR 67 141 -121 253 326 22 33 chr2 175517764 175517856 -75169998 - L2 LINE L2 0 3272 3182 4121 201 15 0 chr2 175518244 175519111 -75168743 - L1P LINE L1 -945 5852 4973 * 5240 250 33 19 chr2 175519108 175521927 -75165927 - L1PA13 LINE L1 -3589 3208 1 392 297 42 0 chr2 175521943 175522061 -75165793 + MIR SINE MIR 104 226 -36 35 0 0 0 chr2 175522943 175522978 -75164876 + AT_rich Low_complexity Low_complexity 1 35 0 271 309 21 11 chr2 175523487 175523581 -75164273 - MIR SINE MIR -112 150 56 21 0 0 0 chr2 175523837 175523858 -75163996 + AT_rich Low_complexity Low_complexity 1 21 0 2124 46 0 0 chr2 175524050 175524311 -75163543 + L1PA2 LINE L1 5893 6153 -2 261 0 0 0 chr2 175524314 175524343 -75163511 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 236 53 26 0 chr2 175524360 175524398 -75163456 + (TAAAAA)n Simple_repeat Simple_repeat 2 40 0 1395 224 2 5 chr2 175524658 175525000 -75162854 - L1M4 LINE L1 -1929 4217 3877 341 301 62 41 chr2 175525580 175525726 -75162128 + MLT1H LTR MaLR 195 343 -206 291 228 39 39 chr2 175525747 175525851 -75162003 + MLT1H LTR MaLR 463 547 -2 331 301 62 41 chr2 175527400 175527546 -75160308 + MLT1H LTR MaLR 195 343 -206 1033 342 73 42 chr2 175529197 175530035 -75157819 - L2 LINE L2 0 3313 2503 402 21 0 0 chr2 175530035 175530082 -75157772 + (TG)n Simple_repeat Simple_repeat 2 48 0 1033 342 73 42 chr2 175530082 175530138 -75157716 - L2 LINE L2 -810 2503 2450 894 204 121 48 chr2 175530138 175530451 -75157403 - MER46C DNA MER2_type -2 336 1 1033 342 73 42 chr2 175530451 175530749 -75157105 - L2 LINE L2 -863 2450 2077 333 117 0 0 chr2 175530749 175530809 -75157045 + (CA)n Simple_repeat Simple_repeat 2 61 0 1033 342 73 42 chr2 175530809 175530834 -75157020 - L2 LINE L2 -1236 2077 2054 866 265 152 55 chr2 175530873 175531457 -75156397 - L2 LINE L2 -1782 1532 892 2082 281 127 68 chr2 175532630 175533601 -75154253 - HAL1 LINE L1 -121 2386 1474 1956 140 0 46 chr2 175533601 175533735 -75154119 + AluSx SINE Alu 3 142 -170 1820 67 0 0 chr2 175533735 175533958 -75153896 + AluY SINE Alu 89 311 0 1956 140 0 46 chr2 175533958 175534130 -75153724 + AluSx SINE Alu 142 295 -17 2082 281 127 68 chr2 175534130 175534159 -75153695 - HAL1 LINE L1 -1033 1474 1448 2428 70 3 0 chr2 175534159 175534459 -75153395 - AluY SINE Alu -10 301 1 2082 281 127 68 chr2 175534459 175535050 -75152804 - HAL1 LINE L1 -1059 1448 893 2435 61 0 13 chr2 175535050 175535361 -75152493 - AluY SINE Alu -4 307 1 2082 281 127 68 chr2 175535361 175536012 -75151842 - HAL1 LINE L1 -1614 893 10 30 0 0 0 chr2 175536034 175536064 -75151790 + AT_rich Low_complexity Low_complexity 1 30 0 298 188 57 55 chr2 175536157 175536282 -75151572 - LTR33A LTR ERVL 0 523 440 192 298 0 0 chr2 175536643 175536690 -75151164 - MIR SINE MIR -130 78 32 182 386 55 31 chr2 175537114 175537277 -75150577 - MIR SINE MIR -43 219 53 646 116 42 0 chr2 175539184 175539279 -75148575 + AluJo SINE Alu 3 101 -211 2409 63 0 0 chr2 175539280 175539582 -75148272 - L1PA6 LINE L1 -246 5908 5607 1903 56 4 8 chr2 175539589 175539838 -75148016 + L1PA5 LINE L1 5903 6151 -3 267 217 0 29 chr2 175539838 175539899 -75147955 + AluJo SINE Alu 82 142 -160 237 200 0 0 chr2 175541430 175541470 -75146384 - 5S rRNA rRNA -80 41 2 5165 284 89 26 chr2 175541563 175541995 -75145859 + L2 LINE L2 842 1245 -2068 349 141 0 130 chr2 175541995 175542087 -75145767 - MADE1 DNA Mariner 0 80 1 5165 284 89 26 chr2 175542087 175542449 -75145405 + L2 LINE L2 1245 1583 -1730 2152 87 7 14 chr2 175542449 175542758 -75145096 + AluY SINE Alu 1 307 0 5165 284 89 26 chr2 175542758 175544284 -75143570 + L2 LINE L2 1583 3313 0 406 245 111 8 chr2 175545311 175545474 -75142380 - L1MB7 LINE L1 -5 6972 6779 8962 225 76 33 chr2 175545548 175547601 -75140253 - L1MB7 LINE L1 -346 6631 4363 6246 97 2 0 chr2 175547601 175548778 -75139076 - L1PA14 LINE L1 -9 6152 4971 8962 225 76 33 chr2 175548778 175550307 -75137547 - L1MB7 LINE L1 -2614 4363 2901 307 278 48 64 chr2 175550336 175550645 -75137209 - L1MB7 LINE L1 -6228 627 111 262 253 40 27 chr2 175551176 175551251 -75136603 - MIR SINE MIR -172 90 15 351 236 0 34 chr2 175551686 175551775 -75136079 + L3 LINE CR1 1390 1475 -102 944 189 131 32 chr2 175552358 175552671 -75135183 + MER2 DNA MER2_type 1 344 0 24 32 0 0 chr2 175553443 175553474 -75134380 + AT_rich Low_complexity Low_complexity 1 31 0 264 158 0 0 chr2 175553565 175553622 -75134232 + CT-rich Low_complexity Low_complexity 1 57 0 260 324 102 0 chr2 175554632 175554740 -75133114 - MER117 DNA MER1_type -35 162 44 367 361 31 0 chr2 175555820 175555950 -75131904 + MIR SINE MIR 2 135 -127 31 20 0 20 chr2 175556867 175556881 -75130973 + AT_rich Low_complexity Low_complexity 1 14 -34 1962 155 7 0 chr2 175556881 175557172 -75130682 - AluSx SINE Alu -19 293 1 31 20 0 20 chr2 175557172 175557206 -75130648 + AT_rich Low_complexity Low_complexity 14 48 0 353 326 77 36 chr2 175558758 175558954 -75128900 - MIR SINE MIR -38 224 21 4438 94 11 5 chr2 175559255 175559896 -75127958 + L1PA13 LINE L1 5519 6163 0 2805 36 0 0 chr2 175559896 175560252 -75127602 - L1P LINE L1 -800 5346 4991 1142 66 24 36 chr2 175560252 175560415 -75127439 + L1PA3 LINE L1 5989 6152 -3 41 0 0 0 chr2 175560415 175560456 -75127398 + AT_rich Low_complexity Low_complexity 1 41 0 4715 162 40 11 chr2 175560662 175561580 -75126274 - L1PB4 LINE L1 -1 6155 5210 304 336 31 8 chr2 175562848 175562976 -75124878 + L2 LINE L2 3179 3309 -4 446 246 41 23 chr2 175563000 175563171 -75124683 - L1M4 LINE L1 -2085 4061 3888 15473 133 12 10 chr2 175563171 175565576 -75122278 + Tigger1 DNA MER2_type 6 2417 -1 1394 273 52 36 chr2 175565579 175566213 -75121641 - L1M4 LINE L1 -2254 3892 3249 200 167 39 13 chr2 175566242 175566320 -75121534 + CT-rich Low_complexity Low_complexity 4 83 0 188 196 152 0 chr2 175566917 175566963 -75120891 - MIR3 SINE MIR -49 159 107 250 291 25 13 chr2 175567422 175567501 -75120353 - L2 LINE L2 -1 3312 3233 27 0 0 0 chr2 175567952 175567979 -75119875 + AT_rich Low_complexity Low_complexity 1 27 0 326 325 26 0 chr2 175568424 175568538 -75119316 - L2 LINE L2 -4 3309 3193 1017 158 23 22 chr2 175568538 175568775 -75119079 + MER31A LTR ERV1 191 433 -33 1130 211 4 35 chr2 175568913 175569173 -75118681 + MER31A LTR ERV1 234 485 0 2239 103 7 0 chr2 175570111 175570421 -75117433 - AluSx SINE Alu 0 312 1 25 31 0 0 chr2 175570543 175570575 -75117279 + AT_rich Low_complexity Low_complexity 1 32 0 310 203 0 43 chr2 175570994 175571063 -75116791 - L1MC4 LINE L1 -1339 6703 6638 2201 29 44 0 chr2 175571064 175571336 -75116518 - L1PA5 LINE L1 -2 6152 5869 580 308 70 35 chr2 175571403 175571744 -75116110 + MLT1K LTR MaLR 214 566 -22 372 268 167 0 chr2 175572266 175572404 -75115450 - MER103 DNA DNA -2 164 4 573 100 0 0 chr2 175572486 175572566 -75115288 - MADE1 DNA Mariner 0 80 1 679 171 0 32 chr2 175572841 175572964 -75114890 + FLAM_A SINE Alu 4 122 -11 240 189 19 38 chr2 175573463 175573516 -75114338 - L2 LINE L2 -16 3297 3246 338 284 18 28 chr2 175574940 175575049 -75112805 + L2 LINE L2 3184 3291 -22 191 245 41 0 chr2 175575827 175575876 -75111978 - MIR3 SINE MIR -3 205 155 1294 261 140 28 chr2 175576329 175577014 -75110840 + MER20B DNA MER1_type 1 762 -21 612 235 10 61 chr2 175577018 175577214 -75110640 - MER5A DNA MER1_type 0 189 4 13870 29 8 0 chr2 175577464 175579898 -75107956 - L1PA4 LINE L1 -4 6151 3704 188 360 13 0 chr2 175581402 175581477 -75106377 + L2 LINE L2 3215 3290 -23 31 58 0 0 chr2 175581775 175581827 -75106027 + AT_rich Low_complexity Low_complexity 1 52 0 2743 10 0 3 chr2 175581980 175582283 -75105571 - AluYa5 SINE Alu -9 302 1 23 33 0 0 chr2 175582287 175582317 -75105537 + AT_rich Low_complexity Low_complexity 1 30 0 337 239 11 33 chr2 175583249 175583341 -75104513 - MIR SINE MIR -3 259 170 22 0 0 0 chr2 175583449 175583471 -75104383 + AT_rich Low_complexity Low_complexity 1 22 0 342 347 8 0 chr2 175583527 175583648 -75104206 - MIR SINE MIR -88 174 53 278 182 15 0 chr2 175584023 175584089 -75103765 + CT-rich Low_complexity Low_complexity 1 67 0 375 60 0 0 chr2 175584289 175584339 -75103515 + (TG)n Simple_repeat Simple_repeat 1 50 0 207 306 71 0 chr2 175584479 175584564 -75103290 + MIR3 SINE MIR 117 207 -1 222 37 0 0 chr2 175585551 175585578 -75102276 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 252 59 0 0 chr2 175586227 175586261 -75101593 + (TG)n Simple_repeat Simple_repeat 2 35 0 544 332 4 35 chr2 175586389 175586615 -75101239 - MIR SINE MIR -24 238 20 541 236 0 0 chr2 175588630 175588736 -75099118 - L1MC4a LINE L1 -1084 6724 6619 195 42 0 0 chr2 175588736 175588760 -75099094 + (GA)n Simple_repeat Simple_repeat 1 24 0 1712 155 125 53 chr2 175589306 175589377 -75098477 - MSTA LTR MaLR 0 428 364 2354 100 3 0 chr2 175589377 175589687 -75098167 + AluSp SINE Alu 1 311 -2 1712 155 125 53 chr2 175589687 175590014 -75097840 - MSTA LTR MaLR -64 364 1 28 29 0 0 chr2 175590051 175590086 -75097768 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr2 175590774 175590817 -75097037 + AT_rich Low_complexity Low_complexity 1 43 0 1993 235 150 19 chr2 175590873 175592001 -75095853 - L1MC4 LINE L1 -262 7780 6462 27 49 0 0 chr2 175592012 175592053 -75095801 + AT_rich Low_complexity Low_complexity 1 41 0 2235 141 25 0 chr2 175592071 175592426 -75095428 + THE1B LTR MaLR 1 364 0 312 337 82 45 chr2 175592434 175592677 -75095177 + L1M4 LINE L1 4674 4925 -1221 735 340 95 50 chr2 175593721 175594667 -75093187 + L2 LINE L2 1871 2859 -455 27 81 0 0 chr2 175594920 175594982 -75092872 + AT_rich Low_complexity Low_complexity 1 62 0 259 351 0 0 chr2 175595276 175595353 -75092501 + L3 LINE CR1 1500 1576 -1 242 271 94 31 chr2 175595750 175595846 -75092008 + MIR SINE MIR 131 232 -30 457 382 50 17 chr2 175596495 175596736 -75091118 + MIR SINE MIR 2 250 -12 891 215 143 60 chr2 175598699 175599034 -75088820 + MLT1A1 LTR MaLR 1 363 -2 318 300 163 26 chr2 175599406 175599639 -75088215 - L2 LINE L2 -245 3068 2804 267 239 261 11 chr2 175600791 175600883 -75086971 - L2 LINE L2 0 3272 3158 321 68 0 0 chr2 175600916 175600960 -75086894 + (CAA)n Simple_repeat Simple_repeat 2 45 0 516 233 0 17 chr2 175601162 175601278 -75086576 - MIR3 SINE MIR -1 207 94 265 306 12 47 chr2 175601621 175601706 -75086148 + MIR SINE MIR 1 82 -180 180 0 0 0 chr2 175602238 175602258 -75085596 + (T)n Simple_repeat Simple_repeat 1 20 0 7846 13 2 0 chr2 175602262 175603263 -75084591 - L1HS LINE L1 -2 6153 5150 21 36 0 0 chr2 175604025 175604053 -75083801 + AT_rich Low_complexity Low_complexity 1 28 0 449 354 17 11 chr2 175605064 175605245 -75082609 - MIR3 SINE MIR -5 203 22 26 0 0 0 chr2 175607483 175607509 -75080345 + AT_rich Low_complexity Low_complexity 1 26 0 2069 121 10 3 chr2 175609134 175609431 -75078423 + AluSx SINE Alu 1 299 -13 212 107 53 40 chr2 175613307 175613382 -75074472 + (TTATA)n Simple_repeat Simple_repeat 1 76 0 277 250 0 16 chr2 175613519 175613583 -75074271 - Charlie8 DNA MER1_type -1000 1417 1355 1403 104 0 0 chr2 175613873 175614055 -75073799 + AluSg/x SINE Alu 131 312 0 348 318 98 37 chr2 175614174 175614388 -75073466 - L3 LINE CR1 -109 1468 1242 22 35 0 0 chr2 175615323 175615352 -75072502 + AT_rich Low_complexity Low_complexity 1 29 0 537 298 21 7 chr2 175615878 175616019 -75071835 + MER5B DNA MER1_type 1 143 -35 277 120 250 54 chr2 175616474 175616566 -75071288 - MER103 DNA DNA -10 156 47 22 35 0 0 chr2 175617203 175617232 -75070622 + AT_rich Low_complexity Low_complexity 1 29 0 213 214 34 0 chr2 175617271 175617319 -75070535 - MIR SINE MIR -42 166 112 230 231 0 0 chr2 175619531 175619583 -75068271 + (CA)n Simple_repeat Simple_repeat 1 52 0 226 280 75 0 chr2 175619593 175619686 -75068168 + MER103 DNA DNA 67 166 0 24 32 0 0 chr2 175620002 175620033 -75067821 + AT_rich Low_complexity Low_complexity 1 31 0 224 345 60 60 chr2 175620217 175620466 -75067388 + L2 LINE L2 2839 3087 -185 565 292 79 11 chr2 175620598 175620776 -75067078 - MIR3 SINE MIR -4 204 15 397 304 209 5 chr2 175620813 175621014 -75066840 - MIR SINE MIR 0 262 21 1795 213 108 99 chr2 175621145 175621256 -75066598 + L1ME3A LINE L1 5404 5512 -658 837 234 62 14 chr2 175621256 175621301 -75066553 - MER20 DNA MER1_type 0 219 178 2198 97 4 0 chr2 175621301 175621580 -75066274 - AluSg SINE Alu -13 297 18 837 234 62 14 chr2 175621580 175621743 -75066111 - MER20 DNA MER1_type -41 178 1 1795 213 108 99 chr2 175621743 175622151 -75065703 + L1ME3A LINE L1 5512 5980 -190 232 170 0 0 chr2 175622151 175622198 -75065656 - U5 snRNA snRNA -69 47 1 1795 213 108 99 chr2 175622198 175622387 -75065467 + L1ME3A LINE L1 5980 6166 -4 1626 191 0 50 chr2 175622985 175623306 -75064548 - AluJb SINE Alu 0 306 1 25 0 0 0 chr2 175623541 175623566 -75064288 + AT_rich Low_complexity Low_complexity 1 25 0 415 264 43 64 chr2 175623845 175623985 -75063869 + L2 LINE L2 3171 3307 -6 350 206 80 109 chr2 175624341 175624516 -75063338 + MIR3 SINE MIR 12 181 -27 413 311 139 5 chr2 175624883 175625092 -75062762 - MIR SINE MIR -1 261 25 843 186 18 149 chr2 175625298 175625626 -75062228 + MER97b DNA MER1_type? 113 397 -656 2078 131 3 0 chr2 175625695 175625993 -75061861 + AluSx SINE Alu 1 299 -13 397 284 50 66 chr2 175626469 175626786 -75061068 + MER97c DNA MER1_type? 776 1087 -3 425 241 38 30 chr2 175627190 175627323 -75060531 + MIR SINE MIR 129 262 0 33 35 0 17 chr2 175627429 175627462 -75060392 + AT_rich Low_complexity Low_complexity 1 34 -23 1413 154 48 17 chr2 175627462 175627754 -75060100 - L1MA7 LINE L1 0 6291 5991 33 35 0 17 chr2 175627754 175627778 -75060076 + AT_rich Low_complexity Low_complexity 34 57 0 4640 129 36 16 chr2 175628172 175628998 -75058856 + Tigger3b DNA MER2_type 1 843 -388 12853 93 5 4 chr2 175629380 175629754 -75058100 - L1PA7 LINE L1 -2 6152 5780 2595 33 3 0 chr2 175629754 175630055 -75057799 - AluY SINE Alu -9 302 1 12853 93 5 4 chr2 175630055 175632307 -75055547 - L1PA7 LINE L1 -374 5780 3532 429 283 84 44 chr2 175633388 175633707 -75054147 + L1MC4a LINE L1 5582 5920 -246 497 236 25 74 chr2 175633942 175634145 -75053709 + L1ME1 LINE L1 5956 6148 -18 231 374 12 0 chr2 175634368 175634451 -75053403 - MIR SINE MIR -101 161 78 392 110 0 55 chr2 175634475 175634548 -75053306 + L1PA8 LINE L1 6104 6172 0 231 294 73 44 chr2 175635521 175635657 -75052197 - L2 LINE L2 0 3313 3174 355 240 58 19 chr2 175635914 175636018 -75051836 + HsTC2 DNA Tc2 14 121 -1777 280 224 0 0 chr2 175636021 175636079 -75051775 + MER116 DNA Mariner 4 61 -19 1356 268 36 7 chr2 175636090 175636508 -75051346 + HsTC2 DNA Tc2 131 560 -1338 708 186 93 6 chr2 175636509 175636531 -75051323 - Ricksha DNA DNA -2878 368 333 2862 88 2 10 chr2 175636531 175636928 -75050926 - HERVL-A2 LTR ERVL 0 5654 5261 * 25975 101 36 25 chr2 175636927 175638866 -75048988 - HERVL-A2 LTR ERVL -1747 3907 1991 2386 112 5 37 chr2 175638866 175639242 -75048612 + THE1B LTR MaLR 1 364 0 10425 97 14 60 chr2 175639242 175640898 -75046956 + THE1B-int LTR MaLR 1 1580 0 2448 122 0 16 chr2 175640898 175641268 -75046586 + THE1B LTR MaLR 1 364 0 25975 101 36 25 chr2 175641268 175643190 -75044664 - HERVL-A2 LTR ERVL -3662 1992 1 2008 174 52 38 chr2 175643190 175643735 -75044119 - MLT2A2 LTR ERVL 0 554 1 295 164 0 41 chr2 175643736 175643809 -75044045 - L1M2 LINE L1 -821 5491 5422 835 133 76 41 chr2 175643836 175644099 -75043755 - L1M2 LINE L1 -743 5403 5181 1658 124 0 4 chr2 175644099 175644358 -75043496 + HSMAR2 DNA Mariner 1043 1300 -2 4730 203 57 10 chr2 175644360 175645585 -75042269 - L1M1 LINE L1 -2781 4784 3498 2101 151 3 0 chr2 175645585 175645897 -75041957 - AluSq SINE Alu 0 313 1 4730 203 57 10 chr2 175645897 175645937 -75041917 - L1M1 LINE L1 -4067 3498 3461 6787 70 18 92 chr2 175645938 175647702 -75040152 - SVA Other Other -723 1386 1 590 0 175 0 chr2 175647702 175647822 -75040032 + GA-rich Low_complexity Low_complexity 5 145 0 185 0 40 0 chr2 175647823 175647848 -75040006 + (TTTC)n Simple_repeat Simple_repeat 1 26 0 3122 275 49 19 chr2 175647848 175649040 -75038814 - L1M1 LINE L1 -4036 3529 2283 288 0 0 0 chr2 175649040 175649072 -75038782 + (TTA)n Simple_repeat Simple_repeat 2 33 0 3122 275 49 19 chr2 175649072 175649357 -75038497 - L1M1 LINE L1 -5282 2283 2008 2176 244 11 46 chr2 175649369 175649930 -75037924 - L1M1 LINE L1 -6483 1006 466 33 56 0 0 chr2 175650013 175650067 -75037787 + AT_rich Low_complexity Low_complexity 1 54 0 1566 253 57 19 chr2 175650868 175651342 -75036512 - MLT1E2 LTR MaLR 0 626 135 2146 110 0 0 chr2 175651685 175651999 -75035855 - AluSg SINE Alu 0 314 1 22 56 0 0 chr2 175652957 175652993 -75034861 + AT_rich Low_complexity Low_complexity 1 36 0 2478 62 0 7 chr2 175653119 175653424 -75034430 + AluY SINE Alu 1 303 -8 2864 239 32 40 chr2 175655042 175655407 -75032447 - L1ME2 LINE L1 -1 6163 5797 2332 68 7 3 chr2 175655407 175655700 -75032154 + AluY SINE Alu 1 294 -17 2864 239 32 40 chr2 175655700 175656028 -75031826 - L1ME2 LINE L1 -367 5797 5468 2075 157 76 25 chr2 175656028 175656435 -75031419 - MSTA LTR MaLR 0 428 1 2864 239 32 40 chr2 175656435 175656480 -75031374 - L1ME2 LINE L1 -696 5468 5424 1944 141 16 48 chr2 175656480 175656856 -75030998 + THE1B LTR MaLR 1 364 0 10899 106 27 2 chr2 175656856 175658398 -75029456 + THE1B-int LTR MaLR 1 1580 0 2008 118 32 59 chr2 175658398 175658772 -75029082 + THE1B LTR MaLR 1 364 0 2864 239 32 40 chr2 175658772 175659292 -75028562 - L1ME2 LINE L1 -737 5427 4920 1558 159 35 39 chr2 175661463 175661767 -75026087 + AluJo SINE Alu 1 303 0 2395 92 0 6 chr2 175663342 175663656 -75024198 - AluSx SINE Alu 0 312 1 225 309 36 46 chr2 175663753 175663947 -75023907 + L2 LINE L2 1800 1991 -1323 599 251 101 23 chr2 175664659 175664878 -75022976 - MIR SINE MIR -6 256 21 966 267 28 53 chr2 175665036 175665568 -75022286 + L1MC5 LINE L1 7393 7911 -50 484 170 10 10 chr2 175665596 175665696 -75022158 + L1MA10 LINE L1 6222 6321 -13 29 28 0 0 chr2 175665801 175665837 -75022017 + AT_rich Low_complexity Low_complexity 1 36 0 342 352 84 17 chr2 175668425 175668604 -75019250 + L3 LINE CR1 1337 1527 -50 24 0 0 0 chr2 175668818 175668842 -75019012 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr2 175669049 175669074 -75018780 + (T)n Simple_repeat Simple_repeat 1 25 0 279 0 0 0 chr2 175669888 175669919 -75017935 + (T)n Simple_repeat Simple_repeat 1 31 0 944 315 41 19 chr2 175670718 175671086 -75016768 + L2 LINE L2 2864 3239 -74 4269 79 17 2 chr2 175671159 175671740 -75016114 - L1PA13 LINE L1 -8 6155 5566 476 229 10 0 chr2 175671830 175671926 -75015928 - MER81 DNA DNA -13 101 5 240 272 214 10 chr2 175672239 175672342 -75015512 + MIR SINE MIR 21 144 -64 364 254 25 8 chr2 175673065 175673183 -75014671 + L1MA4A LINE L1 6180 6299 -4 336 303 83 87 chr2 175673187 175673441 -75014413 + MIR SINE MIR 10 262 0 * 418 248 30 10 chr2 175673428 175673529 -75014325 - MIR SINE MIR -105 157 55 729 205 168 45 chr2 175673585 175673829 -75014025 + ORSL DNA AcHobo 1 274 -1 418 113 9 47 chr2 175675343 175675449 -75012405 + (GGAA)n Simple_repeat Simple_repeat 4 105 0 878 282 4 4 chr2 175675462 175675721 -75012133 + MIR SINE MIR 2 260 -2 189 0 0 0 chr2 175676786 175676807 -75011047 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 218 359 0 11 chr2 175677044 175677136 -75010718 + CT-rich Low_complexity Low_complexity 2 92 0 1481 144 58 40 chr2 175677170 175677196 -75010658 - AluSx SINE Alu -2 310 286 3638 45 0 0 chr2 175677196 175677638 -75010216 - L1PA5 LINE L1 -6 6148 5707 1481 144 58 40 chr2 175677638 175677888 -75009966 - AluSx SINE Alu -26 286 29 24 85 0 0 chr2 175677938 175677997 -75009857 + AT_rich Low_complexity Low_complexity 1 59 0 512 167 0 0 chr2 175678137 175678215 -75009639 - AluJ/FLAM SINE Alu -228 84 7 50 0 0 0 chr2 175678944 175678994 -75008860 + AT_rich Low_complexity Low_complexity 1 50 0 542 201 14 58 chr2 175680158 175680297 -75007557 - MLT1I LTR MaLR -8 401 269 21 57 0 0 chr2 175680694 175680729 -75007125 + AT_rich Low_complexity Low_complexity 1 35 0 235 253 0 35 chr2 175681790 175681877 -75005977 + CT-rich Low_complexity Low_complexity 1 84 0 1864 207 38 25 chr2 175681912 175682356 -75005498 - LTR40c LTR ERVL -12 453 4 274 322 121 20 chr2 175683555 175683704 -75004150 + MER115 DNA AcHobo 1 164 -529 853 200 56 0 chr2 175683725 175683905 -75003949 + MER45B DNA AcHobo 851 1040 0 1458 216 159 41 chr2 175683987 175684478 -75003376 + L1ME3A LINE L1 5622 6170 0 976 79 0 0 chr2 175684602 175684728 -75003126 - AluSc SINE Alu -9 300 175 325 320 31 16 chr2 175687495 175687623 -75000231 + MIR SINE MIR 24 153 -109 1070 288 213 21 chr2 175688334 175689304 -74998550 - L2 LINE L2 -4 3309 2158 195 42 0 0 chr2 175689604 175689628 -74998226 + (TG)n Simple_repeat Simple_repeat 1 24 0 209 119 24 0 chr2 175689628 175689670 -74998184 + GA-rich Low_complexity Low_complexity 2 44 0 1908 150 7 7 chr2 175690222 175690516 -74997338 + AluJb SINE Alu 16 309 -3 2249 103 0 0 chr2 175691675 175691977 -74995877 - AluY SINE Alu -9 302 1 445 139 58 0 chr2 175692022 175692108 -74995746 + L1PA13 LINE L1 6073 6163 0 1571 183 0 47 chr2 175692309 175692626 -74995228 + AluJo SINE Alu 1 302 -10 188 325 77 60 chr2 175693070 175693187 -74994667 + MIR SINE MIR 30 148 -60 315 307 31 47 chr2 175693424 175693551 -74994303 - MIR3 SINE MIR -23 185 61 233 261 159 11 chr2 175694569 175694657 -74993197 + MER5B DNA MER1_type 78 178 0 2007 125 4 0 chr2 175695559 175695867 -74991987 + AluSg SINE Alu 1 309 0 469 272 112 18 chr2 175696029 175696198 -74991656 - MIR SINE MIR -50 212 28 194 343 9 38 chr2 175697285 175697390 -74990464 - MIR SINE MIR -13 249 148 25 0 0 0 chr2 175697397 175697422 -74990432 + AT_rich Low_complexity Low_complexity 1 25 0 1344 57 6 0 chr2 175697422 175697597 -74990257 - L1PA8A LINE L1 -28 6103 5928 21483 98 5 4 chr2 175697617 175700075 -74987779 - L1PA7 LINE L1 -15 6139 3675 318 50 0 0 chr2 175700075 175700115 -74987739 + (TG)n Simple_repeat Simple_repeat 2 41 0 21483 98 5 4 chr2 175700115 175701561 -74986293 - L1PA7 LINE L1 -2479 3675 2232 8548 142 13 30 chr2 175701572 175703100 -74984754 + L1PA7 LINE L1 717 2218 -3928 303 229 16 0 chr2 175703114 175703175 -74984679 - MIR SINE MIR -115 147 86 322 209 0 81 chr2 175703206 175703292 -74984562 + MIR SINE MIR 70 148 -114 2205 108 0 7 chr2 175704024 175704321 -74983533 - AluSx SINE Alu -17 295 1 860 340 21 61 chr2 175704397 175704691 -74983163 - L2 LINE L2 -5 3308 3039 2185 104 3 7 chr2 175704691 175704998 -74982856 + AluSq SINE Alu 1 306 -7 860 340 21 61 chr2 175704998 175705180 -74982674 - L2 LINE L2 -274 3039 2851 2796 284 128 24 chr2 175705569 175707348 -74980506 + L2 LINE L2 616 3311 -2 3494 173 102 58 chr2 175707649 175708451 -74979403 - L1MB4 LINE L1 -4 6176 5290 1982 146 0 3 chr2 175708451 175708746 -74979108 - AluSx SINE Alu -18 294 1 3494 173 102 58 chr2 175708746 175709093 -74978761 - L1MB4 LINE L1 -890 5290 4960 279 289 321 0 chr2 175709322 175709509 -74978345 + MIR SINE MIR 6 252 -10 2330 113 58 3 chr2 175711759 175712104 -74975750 - THE1B LTR MaLR 0 364 1 515 330 102 0 chr2 175712149 175712355 -74975499 - MIR SINE MIR -24 238 12 197 259 0 19 chr2 175712426 175712480 -74975374 - MIR3 SINE MIR -3 205 153 22 0 0 0 chr2 175715018 175715040 -74972814 + AT_rich Low_complexity Low_complexity 1 22 0 262 291 86 10 chr2 175716289 175716413 -74971441 + MIR SINE MIR 19 150 -63 237 211 19 19 chr2 175716952 175717004 -74970850 + L2 LINE L2 3259 3310 -3 345 331 22 19 chr2 175717859 175718001 -74969853 + MIR SINE MIR 12 153 -66 242 176 20 0 chr2 175719031 175719082 -74968772 + L2 LINE L2 3262 3313 0 1882 238 29 81 chr2 175719524 175719824 -74968030 - L1ME1 LINE L1 -4 6162 5848 1536 145 137 0 chr2 175719824 175720079 -74967775 - 7SLRNA srpRNA srpRNA -10 310 21 1882 238 29 81 chr2 175720079 175720508 -74967346 - L1ME1 LINE L1 -318 5848 5471 550 232 62 54 chr2 175720789 175720953 -74966901 + L1ME1 LINE L1 4076 4244 -1902 2170 116 0 0 chr2 175720953 175721245 -74966609 - AluSx SINE Alu -20 292 1 550 232 62 54 chr2 175721245 175721304 -74966550 + L1ME1 LINE L1 4244 4301 -1845 3499 204 59 40 chr2 175721310 175723041 -74964813 + L1ME1 LINE L1 4383 6184 0 845 253 22 66 chr2 175723348 175723621 -74964233 - MLT1J2 LTR MaLR -189 261 1 812 143 0 14 chr2 175726362 175726502 -74961352 - L1M2 LINE L1 -684 5607 5470 742 223 119 16 chr2 175726507 175726700 -74961154 - AluJo SINE Alu -14 298 86 3660 165 36 9 chr2 175726701 175726789 -74961065 - L1M2 LINE L1 -743 5403 5319 1589 204 69 19 chr2 175726789 175727166 -74960688 - MSTD LTR MaLR 0 396 1 3660 165 36 9 chr2 175727166 175727876 -74959978 - L1M2 LINE L1 -827 5319 4655 216 0 0 0 chr2 175727876 175727900 -74959954 + (TG)n Simple_repeat Simple_repeat 1 24 0 3660 165 36 9 chr2 175727900 175727955 -74959899 - L1M2 LINE L1 -1491 4655 4603 964 128 7 0 chr2 175727960 175728108 -74959746 + L1MA7 LINE L1 5572 5720 -571 2731 169 6 4 chr2 175728115 175728619 -74959235 + L1MA7 LINE L1 5775 6279 -12 485 238 79 0 chr2 175728889 175728990 -74958864 + MER58A DNA MER1_type 1 109 0 1046 256 17 59 chr2 175729125 175729414 -74958440 - LTR16C LTR ERVL 0 491 215 14390 124 26 30 chr2 175729416 175730194 -74957660 + Tigger1 DNA MER2_type 65 845 -1573 1875 92 65 0 chr2 175730194 175730492 -74957362 + AluSc SINE Alu 1 315 0 14390 124 26 30 chr2 175730492 175732074 -74955780 + Tigger1 DNA MER2_type 845 2416 -2 566 308 19 0 chr2 175732079 175732238 -74955616 - LTR16C LTR ERVL -292 199 38 737 352 58 48 chr2 175732399 175733435 -74954419 - ERVL LTR ERVL -383 5381 4293 786 375 48 11 chr2 175733510 175734070 -74953784 - ERVL LTR ERVL -1493 4161 3581 2505 324 39 12 chr2 175734231 175735228 -74952626 - ERVL LTR ERVL -2007 2989 1966 615 200 77 32 chr2 175736443 175736598 -74951256 - LTR16C LTR ERVL -113 378 217 344 340 28 0 chr2 175736629 175736770 -74951084 - LTR16C LTR ERVL -346 145 1 2011 162 143 36 chr2 175737235 175737703 -74950151 - MLT2B1 LTR ERVL -2 518 1 212 213 0 33 chr2 175737860 175737921 -74949933 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 2107 99 0 0 chr2 175739045 175739327 -74948527 + AluYb8 SINE Alu 37 318 0 3418 179 61 8 chr2 175740145 175740814 -74947040 + MER44D DNA MER2_type 1 705 0 653 178 0 8 chr2 175741279 175741408 -74946446 + L1ME2 LINE L1 6036 6163 -1 21 0 0 0 chr2 175741739 175741760 -74946094 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 175741949 175741978 -74945876 + AT_rich Low_complexity Low_complexity 1 29 0 24 32 0 0 chr2 175742504 175742535 -74945319 + AT_rich Low_complexity Low_complexity 1 31 0 242 329 24 111 chr2 175742860 175743067 -74944787 - L2 LINE L2 -101 3171 2983 289 339 63 60 chr2 175743074 175743578 -74944276 - L2 LINE L2 -515 2799 2294 186 43 0 0 chr2 175744045 175744068 -74943786 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr2 175744278 175744300 -74943554 + AT_rich Low_complexity Low_complexity 1 22 0 183 297 40 27 chr2 175745348 175745422 -74942432 + MIR3 SINE MIR 3 77 -131 240 246 22 116 chr2 175746072 175746210 -74941644 + MIR3 SINE MIR 79 203 -5 22 0 0 0 chr2 175746357 175746379 -74941475 + AT_rich Low_complexity Low_complexity 1 22 0 811 313 35 69 chr2 175746854 175747527 -74940327 - L2 LINE L2 -38 3275 2622 876 292 87 22 chr2 175747538 175747942 -74939912 + MLT1J1 LTR MaLR 13 442 -4 528 273 58 54 chr2 175748279 175748484 -74939370 - MIR SINE MIR -6 256 51 615 229 50 0 chr2 175749428 175749568 -74938286 + MIR SINE MIR 67 213 -49 303 28 0 0 chr2 175750947 175750983 -74936871 + (TG)n Simple_repeat Simple_repeat 2 37 0 328 223 92 87 chr2 175753579 175753763 -74934091 + HAL1 LINE L1 13 197 -2310 1194 291 139 12 chr2 175753790 175754530 -74933324 + HAL1 LINE L1 1529 2362 -145 27 73 0 0 chr2 175754647 175754702 -74933152 + AT_rich Low_complexity Low_complexity 1 55 0 4505 76 24 24 chr2 175756989 175758121 -74929733 - MER11A LTR ERVK 0 1266 1 312 120 0 0 chr2 175758264 175758314 -74929540 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 790 261 94 69 chr2 175758440 175758877 -74928977 - LTR37B LTR ERV1 0 468 21 639 252 93 29 chr2 175758926 175759399 -74928455 + LTR33A LTR ERVL 2 520 -3 1947 153 9 15 chr2 175760149 175760483 -74927371 + MLT1A1 LTR MaLR 9 340 -25 1098 249 161 49 chr2 175761224 175761964 -74925890 - HAL1 LINE L1 -110 2397 1575 867 216 11 6 chr2 175761967 175762143 -74925711 - MER45A DNA AcHobo -1 177 1 731 284 72 6 chr2 175762146 175762481 -74925373 - HAL1 LINE L1 -1162 1345 989 1039 152 14 33 chr2 175763077 175763288 -74924566 - L1MA9 LINE L1 -39 6273 6067 23 33 0 0 chr2 175763635 175763665 -74924189 + AT_rich Low_complexity Low_complexity 1 30 0 44 20 0 0 chr2 175763777 175763828 -74924026 + AT_rich Low_complexity Low_complexity 1 51 0 454 259 16 31 chr2 175764523 175764727 -74923127 - L1MA10 LINE L1 -53 6272 5912 510 263 149 3 chr2 175764748 175764864 -74922990 - L1M4 LINE L1 -2474 3672 3574 1988 101 4 7 chr2 175764864 175765142 -74922712 - AluSp SINE Alu -1 312 36 510 263 149 3 chr2 175765142 175765314 -74922540 - L1M4 LINE L1 -2572 3574 3342 476 217 29 0 chr2 175765316 175765454 -74922400 - L1MEc LINE L1 -5454 942 801 363 287 0 0 chr2 175765908 175766023 -74921831 + (TA)n Simple_repeat Simple_repeat 1 115 0 291 54 0 0 chr2 175766925 175766962 -74920892 + (TG)n Simple_repeat Simple_repeat 1 37 0 592 287 83 66 chr2 175767373 175767784 -74920070 - MLT1J LTR MaLR -2 509 92 325 302 44 68 chr2 175767888 175768136 -74919718 - HAL1b LINE L1 -731 617 376 403 236 50 2 chr2 175768728 175768856 -74918998 - MLT1F LTR MaLR -2 540 441 3059 77 18 16 chr2 175769113 175769480 -74918374 - L1PB2 LINE L1 -1 6150 5780 282 56 0 0 chr2 175769480 175769516 -74918338 + (TA)n Simple_repeat Simple_repeat 1 36 0 3059 77 18 16 chr2 175769516 175769587 -74918267 - L1PB2 LINE L1 -371 5780 5711 339 65 0 0 chr2 175771381 175771427 -74916427 + (CA)n Simple_repeat Simple_repeat 1 46 0 1779 163 0 11 chr2 175771814 175772097 -74915757 + AluJb SINE Alu 1 280 -32 751 71 52 19 chr2 175772113 175772267 -74915587 + GA-rich Low_complexity Low_complexity 2 160 0 24 0 0 0 chr2 175772876 175772900 -74914954 + AT_rich Low_complexity Low_complexity 1 24 0 354 327 32 51 chr2 175772961 175773181 -74914673 - MIR3 SINE MIR -46 216 6 722 322 26 4 chr2 175773281 175773511 -74914343 - MIR SINE MIR -5 257 23 642 211 53 35 chr2 175773620 175773791 -74914063 - MER63B DNA MER1_type -260 176 3 425 322 64 18 chr2 175774695 175774866 -74912988 + MIR SINE MIR 15 193 -69 27 73 0 0 chr2 175774881 175774936 -74912918 + AT_rich Low_complexity Low_complexity 1 55 0 2424 80 0 3 chr2 175776182 175776494 -74911360 - AluY SINE Alu 0 311 1 2225 41 7 0 chr2 175777675 175777946 -74909908 - L1PA3 LINE L1 -319 5836 5564 3135 11 0 0 chr2 175777946 175778344 -74909510 + L1PA2 LINE L1 5799 6204 0 2214 105 0 49 chr2 175778408 175778733 -74909121 + AluSg SINE Alu 1 309 -1 790 306 93 40 chr2 175779079 175779553 -74908301 - MLT1K LTR MaLR -17 571 73 393 370 29 0 chr2 175780380 175780588 -74907266 - MIR SINE MIR 0 262 49 593 308 108 56 chr2 175780597 175781153 -74906701 + MLT1L LTR MaLR 24 608 -7 205 233 0 0 chr2 175782265 175782308 -74905546 - L2 LINE L2 0 3313 3271 891 189 44 0 chr2 175782756 175782936 -74904918 - MER5A DNA MER1_type 0 189 2 296 346 1 27 chr2 175783093 175783208 -74904646 - MIR SINE MIR -54 154 41 510 340 50 29 chr2 175784296 175784537 -74903317 + MIR SINE MIR 3 248 -14 738 263 166 105 chr2 175784835 175785481 -74902373 + MER115 DNA AcHobo 1 685 -8 1412 129 22 9 chr2 175786104 175786328 -74901526 - AluSg/x SINE Alu -7 305 79 882 293 144 36 chr2 175787454 175787668 -74900186 - L2 LINE L2 -7 3306 3116 2150 98 13 31 chr2 175787668 175787985 -74899869 + AluSx SINE Alu 1 311 -1 882 293 144 36 chr2 175787985 175788427 -74899427 - L2 LINE L2 -197 3116 2585 3666 158 79 19 chr2 175788434 175789191 -74898663 + L1MC2 LINE L1 5527 6329 -15 291 330 0 0 chr2 175790073 175790176 -74897678 + HAL1b LINE L1 96 198 -1150 2475 45 3 0 chr2 175790213 175790500 -74897354 + AluSp SINE Alu 1 288 -25 679 259 65 45 chr2 175790676 175791034 -74896820 + L2 LINE L2 2647 3021 -292 200 35 35 0 chr2 175791424 175791453 -74896401 + (CA)n Simple_repeat Simple_repeat 2 31 0 432 30 45 0 chr2 175791453 175791519 -74896335 + (GA)n Simple_repeat Simple_repeat 1 69 0 2109 185 3 8 chr2 175791519 175791886 -74895968 - MLT2D LTR ERVL -48 366 2 527 354 132 18 chr2 175795814 175796084 -74891770 + L2 LINE L2 2451 2689 -624 2288 84 7 3 chr2 175796084 175796392 -74891462 - AluY SINE Alu -2 309 1 527 354 132 18 chr2 175796392 175796863 -74890991 + L2 LINE L2 2689 3281 -32 2007 82 67 14 chr2 175796883 175797165 -74890689 - AluSx SINE Alu -12 300 4 279 218 194 0 chr2 175797741 175797853 -74890001 - MIR SINE MIR -63 145 26 2305 114 0 0 chr2 175798937 175799245 -74888609 + AluSg SINE Alu 1 308 -2 25 0 0 0 chr2 175799443 175799468 -74888386 + AT_rich Low_complexity Low_complexity 1 25 0 360 0 0 0 chr2 175800563 175800603 -74887251 + (TG)n Simple_repeat Simple_repeat 1 40 0 22 56 0 0 chr2 175800807 175800843 -74887011 + AT_rich Low_complexity Low_complexity 1 36 0 995 161 166 10 chr2 175800949 175801148 -74886706 + MER1B DNA MER1_type 110 339 0 23 33 0 0 chr2 175801233 175801263 -74886591 + AT_rich Low_complexity Low_complexity 1 30 0 2227 110 0 3 chr2 175802446 175802745 -74885109 - AluSg SINE Alu -12 298 1 236 282 35 12 chr2 175803827 175803912 -74883942 - MIR3 SINE MIR -6 202 116 21 0 0 0 chr2 175804201 175804222 -74883632 + AT_rich Low_complexity Low_complexity 1 21 0 360 329 138 9 chr2 175806610 175806820 -74881034 + MIR SINE MIR 21 257 -5 531 300 6 44 chr2 175807256 175807436 -74880418 + MIR SINE MIR 20 192 -70 566 144 34 51 chr2 175808954 175809072 -74878782 + MER20 DNA MER1_type 1 116 -103 * 766 205 36 0 chr2 175809065 175809231 -74878623 - MLT1A1 LTR MaLR -193 172 1 189 304 108 0 chr2 175809238 175809340 -74878514 - MIR SINE MIR -113 149 37 24 0 0 0 chr2 175809699 175809723 -74878131 + AT_rich Low_complexity Low_complexity 1 24 0 201 175 0 0 chr2 175811227 175811267 -74876587 + (TG)n Simple_repeat Simple_repeat 1 40 0 2580 137 8 0 chr2 175812128 175812564 -74875290 - MER1A DNA MER1_type 0 529 49 450 313 85 70 chr2 175813624 175814174 -74873680 + L2 LINE L2 2702 3270 -43 272 251 43 116 chr2 175815745 175815952 -74871902 + MLT1H LTR MaLR 209 400 -149 576 231 43 0 chr2 175816150 175816267 -74871587 + FLAM_A SINE Alu 1 122 -11 180 0 0 0 chr2 175816270 175816290 -74871564 + (TTAA)n Simple_repeat Simple_repeat 2 21 0 473 289 176 48 chr2 175816653 175817010 -74870844 - L2 LINE L2 0 3313 2911 318 26 0 0 chr2 175817205 175817244 -74870610 + (CA)n Simple_repeat Simple_repeat 2 40 0 1714 170 0 33 chr2 175817422 175817722 -74870132 + AluJo SINE Alu 1 290 -22 588 161 34 0 chr2 175817931 175818049 -74869805 + AluSg1 SINE Alu 11 132 -177 856 226 45 0 chr2 175818627 175818826 -74869028 + MER3 DNA MER1_type 2 209 0 1777 185 42 26 chr2 175820172 175820556 -74867298 - MLT1B LTR MaLR 0 390 1 3608 163 30 10 chr2 175820791 175821464 -74866390 - L1MC2 LINE L1 -9 6335 5650 25 0 0 0 chr2 175821464 175821489 -74866365 + AT_rich Low_complexity Low_complexity 1 25 0 274 274 51 91 chr2 175821604 175821779 -74866075 - MIR3 SINE MIR -40 168 1 206 179 18 0 chr2 175822383 175822439 -74865415 + GA-rich Low_complexity Low_complexity 1 57 0 392 191 154 9 chr2 175823613 175823723 -74864131 - L1MA9 LINE L1 -38 6274 6149 25 31 0 0 chr2 175824216 175824248 -74863606 + AT_rich Low_complexity Low_complexity 1 32 0 1040 181 22 22 chr2 175824696 175824922 -74862932 + L1MC1 LINE L1 3787 4012 -2134 833 147 6 19 chr2 175824924 175825080 -74862774 + L1MA8 LINE L1 5961 6114 -177 21 0 0 0 chr2 175825090 175825111 -74862743 + AT_rich Low_complexity Low_complexity 1 21 0 43212 29 22 2 chr2 175825111 175831121 -74856733 - L1PA3 LINE L1 0 6155 2 700 174 31 11 chr2 175831120 175831302 -74856552 + L1MA8 LINE L1 6098 6291 -12 * 21 71 0 0 chr2 175831318 175831360 -74856494 + AT_rich Low_complexity Low_complexity 1 42 0 3474 232 28 14 chr2 175831375 175832302 -74855552 + L1MC1 LINE L1 4006 4945 -1201 806 200 77 72 chr2 175832333 175832679 -74855175 + MSTD LTR MaLR 1 396 0 3460 168 16 19 chr2 175832683 175833611 -74854243 + L1MC1 LINE L1 4965 5890 -443 861 197 89 19 chr2 175833611 175833824 -74854030 - MSTA LTR MaLR 0 428 201 1901 146 36 41 chr2 175834059 175834423 -74853431 + THE1B LTR MaLR 1 362 -2 8746 178 20 32 chr2 175834431 175834970 -74852884 - MSTA-int LTR MaLR 0 1651 1107 1802 132 65 57 chr2 175834970 175835342 -74852512 + THE1C LTR MaLR 1 375 0 8746 178 20 32 chr2 175835342 175836472 -74851382 - MSTA-int LTR MaLR -544 1107 1 1938 155 137 11 chr2 175836472 175836852 -74851002 - MSTA LTR MaLR 0 428 1 2590 122 28 9 chr2 175836852 175837278 -74850576 + L1MC1 LINE L1 5899 6332 -1 395 227 59 0 chr2 175838211 175838330 -74849524 + MER53 DNA DNA 1 126 -63 207 241 0 35 chr2 175838449 175838536 -74849318 + A-rich Low_complexity Low_complexity 4 87 0 341 291 104 50 chr2 175838628 175838698 -74849156 - L2 LINE L2 -466 2848 2783 2360 146 30 25 chr2 175838698 175839130 -74848724 - Tigger2a DNA MER2_type 0 434 1 341 291 104 50 chr2 175839130 175839300 -74848554 - L2 LINE L2 -531 2783 2595 22 0 0 0 chr2 175839353 175839375 -74848479 + AT_rich Low_complexity Low_complexity 1 22 0 2391 69 0 16 chr2 175840176 175840481 -74847373 - AluY SINE Alu -11 300 1 299 243 230 20 chr2 175840923 175841075 -74846779 + MIR SINE MIR 31 214 -48 244 261 272 0 chr2 175842415 175842507 -74845347 - MLT1J LTR MaLR -324 187 71 2128 238 63 51 chr2 175842643 175843367 -74844487 - MER21B LTR ERV1 -130 733 1 5070 253 85 39 chr2 175843973 175846949 -74840905 + L1ME3 LINE L1 2914 6059 -103 333 0 0 0 chr2 175848597 175848634 -74839220 + (TG)n Simple_repeat Simple_repeat 1 37 0 180 0 0 0 chr2 175850209 175850229 -74837625 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2312 98 3 0 chr2 175850230 175850535 -74837319 + AluSg SINE Alu 1 306 -4 30 0 0 0 chr2 175851132 175851162 -74836692 + AT_rich Low_complexity Low_complexity 1 30 0 2237 110 7 3 chr2 175851359 175851669 -74836185 + AluSq SINE Alu 1 311 -2 263 102 82 0 chr2 175851860 175851909 -74835945 + MADE1 DNA Mariner 1 53 -27 296 49 0 0 chr2 175851951 175851992 -74835862 + MADE1 DNA Mariner 40 80 0 2114 123 0 13 chr2 175852539 175852840 -74835014 - AluSc SINE Alu -12 297 1 2295 94 7 3 chr2 175855473 175855781 -74832073 + AluY SINE Alu 1 309 -2 241 266 175 28 chr2 175858330 175858473 -74829381 + L2 LINE L2 2810 2973 -340 569 321 34 3 chr2 175858543 175858864 -74828990 + L1ME LINE L1 4501 4831 -1315 1021 266 33 102 chr2 175858920 175859911 -74827943 - L1M4c LINE L1 -4550 2409 1488 370 245 30 90 chr2 175860174 175860374 -74827480 - L1M4c LINE L1 -6306 549 87 235 244 89 0 chr2 175860426 175860516 -74827338 + MIR SINE MIR 165 262 0 263 155 56 0 chr2 175860601 175860672 -74827182 + L1MDa LINE L1 1882 1956 -4584 669 267 68 120 chr2 175860710 175861369 -74826485 - L2 LINE L2 -256 3057 2440 387 300 55 41 chr2 175861369 175861646 -74826208 + L1ME LINE L1 5523 5737 -429 6354 161 34 29 chr2 175861698 175863256 -74824598 + L1P3 LINE L1 635 2190 -4271 348 284 31 47 chr2 175863742 175863869 -74823985 + L2 LINE L2 3175 3299 -14 307 330 0 0 chr2 175863882 175863973 -74823881 + GA-rich Low_complexity Low_complexity 2 92 0 377 241 37 9 chr2 175864157 175864265 -74823589 - L1ME2 LINE L1 -208 5956 5846 1602 78 0 0 chr2 175865884 175866102 -74821752 + L1P LINE L1 4698 4915 -1231 17273 27 73 0 chr2 175866102 175868853 -74819001 + L1PA6 LINE L1 3340 6151 -3 21 0 0 0 chr2 175868853 175868874 -74818980 + AT_rich Low_complexity Low_complexity 1 21 0 44 20 0 0 chr2 175870002 175870053 -74817801 + AT_rich Low_complexity Low_complexity 1 51 0 183 239 0 104 chr2 175870312 175870379 -74817475 + MER5B DNA MER1_type 6 65 -113 291 291 30 67 chr2 175870754 175870888 -74816966 + L2 LINE L2 2918 3046 -226 183 361 49 14 chr2 175872832 175872976 -74814878 - MIR SINE MIR -30 232 84 182 342 0 53 chr2 175873346 175873422 -74814432 - MIR SINE MIR -76 132 61 450 159 0 0 chr2 175873602 175873709 -74814145 + (TG)n Simple_repeat Simple_repeat 2 108 0 31 26 0 0 chr2 175874515 175874553 -74813301 + AT_rich Low_complexity Low_complexity 1 38 0 180 152 0 0 chr2 175874589 175874622 -74813232 + (CA)n Simple_repeat Simple_repeat 2 34 0 3608 165 24 11 chr2 175875890 175876550 -74811304 - LTR51 LTR ERV1 0 671 3 2164 192 18 97 chr2 175876872 175877470 -74810384 - MLT2B3 LTR ERVL -3 551 1 10320 158 50 9 chr2 175877470 175879261 -74808593 - ERVL-B3 LTR ERVL -7 5757 3893 * 19152 179 37 6 chr2 175879240 175882657 -74805197 - ERVL-B3 LTR ERVL -2068 3696 176 1684 204 69 111 chr2 175882773 175883351 -74804503 - MLT2B3 LTR ERVL 0 554 1 860 262 23 19 chr2 175883400 175883614 -74804240 + MIR SINE MIR 3 217 -45 1686 148 8 8 chr2 175883633 175883896 -74803958 - AluJo SINE Alu -16 296 34 2313 113 0 0 chr2 175886287 175886597 -74801257 + AluSx SINE Alu 1 310 -2 34 0 0 0 chr2 175886597 175886631 -74801223 + AT_rich Low_complexity Low_complexity 1 34 0 349 248 15 5 chr2 175887190 175887338 -74800516 + MIR SINE MIR 50 262 0 1314 146 73 69 chr2 175887498 175887708 -74800146 - THE1B LTR MaLR -89 275 62 2176 94 0 3 chr2 175887708 175887994 -74799860 - AluSp SINE Alu -28 285 1 1314 146 73 69 chr2 175887994 175888057 -74799797 - THE1B LTR MaLR -302 62 1 1769 178 0 10 chr2 175888213 175888517 -74799337 + AluJb SINE Alu 1 301 -11 2148 140 28 6 chr2 175888812 175889168 -74798686 - THE1B LTR MaLR 0 364 1 551 182 0 0 chr2 175889666 175889765 -74798089 - L1PB4 LINE L1 -83 6073 5975 2489 81 0 0 chr2 175890880 175891187 -74796667 + AluSq SINE Alu 1 307 -6 199 242 67 92 chr2 175891650 175891770 -74796084 + MIR SINE MIR 80 196 -66 375 262 0 0 chr2 175891947 175892050 -74795804 - MER113 DNA MER1_type? -415 106 4 361 229 94 129 chr2 175892097 175892195 -74795659 + MIR SINE MIR 69 158 -104 1976 117 3 58 chr2 175892195 175892504 -74795350 + AluSq SINE Alu 1 292 -21 361 229 94 129 chr2 175892504 175892606 -74795248 + MIR SINE MIR 158 262 0 969 235 108 38 chr2 175893342 175893767 -74794087 + Charlie4a DNA MER1_type 37 491 -17 224 154 19 0 chr2 175894442 175894494 -74793360 + (TTCTG)n Simple_repeat Simple_repeat 2 54 0 204 132 0 26 chr2 175896406 175896444 -74791410 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 175896795 175896816 -74791038 + AT_rich Low_complexity Low_complexity 1 21 0 1961 135 3 3 chr2 175896816 175897124 -74790730 + AluSg SINE Alu 1 308 0 366 319 15 15 chr2 175897317 175897452 -74790402 + MER5A DNA MER1_type 55 189 0 2103 122 0 3 chr2 175897851 175898154 -74789700 - AluSx SINE Alu -10 302 1 320 297 123 31 chr2 175898644 175898839 -74789015 - Charlie8 DNA MER1_type -2176 241 29 268 152 0 229 chr2 175899528 175899633 -74788221 + MER102a DNA MER1_type 222 302 -28 213 94 0 0 chr2 175899678 175899710 -74788144 + (CA)n Simple_repeat Simple_repeat 2 33 0 2416 66 3 0 chr2 175899788 175900092 -74787762 + AluY SINE Alu 4 308 -3 27 0 0 0 chr2 175900092 175900119 -74787735 + AT_rich Low_complexity Low_complexity 1 27 0 1300 139 92 21 chr2 175900239 175900520 -74787334 - L1MA8 LINE L1 0 6291 5991 315 0 0 0 chr2 175901442 175901477 -74786377 + (TG)n Simple_repeat Simple_repeat 2 36 0 186 43 0 0 chr2 175902632 175902655 -74785199 + (A)n Simple_repeat Simple_repeat 1 23 0 203 317 10 20 chr2 175902694 175902795 -74785059 + CT-rich Low_complexity Low_complexity 2 101 0 239 275 202 0 chr2 175903593 175903702 -74784152 - MIR SINE MIR -51 211 81 510 279 131 11 chr2 175904602 175904785 -74783069 - MIR SINE MIR -56 206 2 213 189 0 0 chr2 175906692 175906729 -74781125 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 108 0 0 chr2 175907187 175907224 -74780630 + (TG)n Simple_repeat Simple_repeat 1 37 0 2186 119 0 0 chr2 175907277 175907571 -74780283 + AluSg SINE Alu 4 297 -13 216 295 124 0 chr2 175907827 175907932 -74779922 + L2 LINE L2 3151 3268 -4 205 310 0 0 chr2 175907978 175908036 -74779818 + MIR SINE MIR 160 217 -45 237 114 0 0 chr2 175908118 175908153 -74779701 + HSMAR1 DNA Mariner 1 35 -1252 565 313 94 5 chr2 175908162 175908386 -74779468 - MIR SINE MIR -2 260 17 496 118 0 0 chr2 175908726 175908794 -74779060 - MER58C DNA MER1_type 0 215 148 266 194 15 0 chr2 175908818 175908885 -74778969 + CT-rich Low_complexity Low_complexity 3 70 0 349 227 62 62 chr2 175908885 175909013 -74778841 - MER58C DNA MER1_type -69 146 19 632 216 167 0 chr2 175909223 175909385 -74778469 - MER5A DNA MER1_type 0 189 1 228 304 0 0 chr2 175909731 175909787 -74778067 + L2 LINE L2 3217 3272 0 510 290 116 7 chr2 175910512 175910667 -74777187 + MIR SINE MIR 65 236 -26 210 257 14 0 chr2 175910906 175910980 -74776874 + (TA)n Simple_repeat Simple_repeat 1 75 0 384 59 0 0 chr2 175911188 175911239 -74776615 + (CA)n Simple_repeat Simple_repeat 2 52 0 593 92 0 23 chr2 175911763 175911869 -74775985 - AluSx SINE Alu 0 310 203 1435 113 5 0 chr2 175911959 175912154 -74775700 - AluSx SINE Alu -116 196 1 228 236 19 9 chr2 175912270 175912376 -74775478 + (TA)n Simple_repeat Simple_repeat 1 107 0 22 0 0 0 chr2 175913409 175913431 -74774423 + AT_rich Low_complexity Low_complexity 1 22 0 279 79 0 0 chr2 175914930 175914968 -74772886 + (CATA)n Simple_repeat Simple_repeat 3 40 0 347 232 0 38 chr2 175915160 175915283 -74772571 - MIR SINE MIR -18 190 79 375 293 34 39 chr2 175915318 175915523 -74772331 + L2 LINE L2 3109 3312 -1 183 272 117 39 chr2 175915769 175915872 -74771982 - MER5B DNA MER1_type -22 156 46 239 284 40 0 chr2 175916267 175916341 -74771513 + MIR3 SINE MIR 111 187 -21 15804 93 3 0 chr2 175917550 175920740 -74767114 + L1PA7 LINE L1 3013 6147 -7 2127 102 0 49 chr2 175921801 175922126 -74765728 + AluSc SINE Alu 1 309 0 290 275 55 0 chr2 175922138 175922229 -74765625 + L3 LINE CR1 1465 1560 -17 505 235 91 0 chr2 175922230 175922362 -74765492 - MIR SINE MIR 0 262 119 1369 35 0 0 chr2 175923113 175923287 -74764567 - L1P LINE L1 -2825 3321 3148 7539 30 1 1 chr2 175923287 175924698 -74763156 + L1PA4 LINE L1 4743 6155 0 349 239 17 0 chr2 175924719 175924836 -74763018 + GA-rich Low_complexity Low_complexity 1 119 0 189 0 0 0 chr2 175925889 175925910 -74761944 + (CA)n Simple_repeat Simple_repeat 1 21 0 281 317 84 82 chr2 175926818 175927404 -74760450 + L2 LINE L2 2675 3268 -4 191 294 176 37 chr2 175928032 175928168 -74759686 - MIR SINE MIR -20 242 88 26 0 0 0 chr2 175928729 175928755 -74759099 + AT_rich Low_complexity Low_complexity 1 26 0 968 337 133 26 chr2 175929732 175930551 -74757303 + L3 LINE CR1 641 1547 -30 410 283 42 0 chr2 175930927 175931047 -74756807 - MIR SINE MIR -63 145 21 27 103 0 0 chr2 175931827 175931924 -74755930 + AT_rich Low_complexity Low_complexity 1 97 0 32 67 0 0 chr2 175933269 175933329 -74754525 + AT_rich Low_complexity Low_complexity 1 60 0 900 187 62 22 chr2 175933342 175933567 -74754287 - L1MA6 LINE L1 0 6300 6067 2179 198 62 27 chr2 175933814 175934815 -74753039 + L1MC/D LINE L1 4707 5736 -608 2177 270 268 20 chr2 175934817 175935380 -74752474 - L2 LINE L2 -791 2523 2101 576 202 0 0 chr2 175935380 175935504 -74752350 - L1MA10 LINE L1 -14 6320 6197 2177 270 268 20 chr2 175935504 175936048 -74751806 - L2 LINE L2 -1213 2101 1141 1581 203 89 47 chr2 175936486 175936633 -74751221 + MLT1C LTR MaLR 1 140 -327 3643 154 19 73 chr2 175936633 175937463 -74750391 - LTR1 LTR ERV1 0 785 1 1581 203 89 47 chr2 175937463 175937763 -74750091 + MLT1C LTR MaLR 140 467 0 263 325 53 24 chr2 175937858 175938027 -74749827 + L2 LINE L2 508 681 -2633 924 329 113 15 chr2 175938030 175938632 -74749222 + L2 LINE L2 1001 1661 -1653 3738 135 35 97 chr2 175938639 175939475 -74748379 + L1 LINE L1 3448 4231 -1915 1734 151 42 7 chr2 175940497 175940782 -74747072 + AluJo SINE Alu 1 295 -17 2278 102 0 0 chr2 175943076 175943371 -74744483 - AluSc SINE Alu -14 295 1 263 370 31 21 chr2 175944355 175944500 -74743354 - MIR SINE MIR -55 153 20 373 273 70 63 chr2 175946897 175947148 -74740706 - L2 LINE L2 -313 3000 2749 293 156 44 89 chr2 175947154 175947244 -74740610 + MER39B LTR ERV1 6 91 -562 * 1410 195 108 49 chr2 175947218 175947590 -74740264 + MER39 LTR ERV1 257 659 -48 1825 151 57 13 chr2 175947590 175947889 -74739965 - AluSx SINE Alu 0 312 1 1410 195 108 49 chr2 175947889 175947942 -74739912 + MER39 LTR ERV1 659 707 0 231 301 133 0 chr2 175948160 175948273 -74739581 - Charlie8 DNA MER1_type -2256 161 34 2096 109 0 39 chr2 175948278 175948590 -74739264 - AluSg SINE Alu -10 300 1 715 195 8 0 chr2 175948650 175948778 -74739076 - MER47B DNA MER2_type -1 417 289 899 68 30 15 chr2 175948779 175948912 -74738942 - MER85 DNA T2_type 0 139 5 * 1365 199 0 0 chr2 175948910 175949156 -74738698 - MER47B DNA MER2_type -140 278 33 1997 119 40 77 chr2 175949213 175949591 -74738263 + THE1B LTR MaLR 1 364 0 11457 101 2 4 chr2 175949592 175951173 -74736681 + THE1B-int LTR MaLR 2 1580 0 1889 131 122 15 chr2 175951173 175951502 -74736352 + THE1B LTR MaLR 1 364 0 224 230 203 0 chr2 175951613 175951687 -74736167 - L2 LINE L2 -5 3308 3220 274 287 74 98 chr2 175951976 175952433 -74735421 + L2 LINE L2 1640 2085 -1229 198 291 13 51 chr2 175952532 175952611 -74735243 + L2 LINE L2 2323 2398 -916 210 176 0 0 chr2 175953230 175953281 -74734573 + CT-rich Low_complexity Low_complexity 2 52 0 387 0 0 0 chr2 175953282 175953325 -74734529 + (CA)n Simple_repeat Simple_repeat 2 44 0 29 70 0 0 chr2 175953635 175953692 -74734162 + AT_rich Low_complexity Low_complexity 1 57 0 1126 280 137 57 chr2 175955864 175956664 -74731190 - L2 LINE L2 -18 3254 2396 220 337 0 23 chr2 175956723 175956809 -74731045 - L2 LINE L2 -942 2372 2289 323 364 55 12 chr2 175957265 175957430 -74730424 - L1M LINE L1 -2379 5429 5258 5364 172 17 21 chr2 175958327 175960359 -74727495 + L1PB3 LINE L1 4125 6152 -2 266 241 14 132 chr2 175962619 175962809 -74725045 - MIR SINE MIR -2 260 99 193 311 82 82 chr2 175963209 175963466 -74724388 - L2 LINE L2 -832 2482 2226 299 200 77 0 chr2 175963485 175963550 -74724304 - MIR SINE MIR -37 225 156 1203 252 70 29 chr2 175963551 175963995 -74723859 + MLT1C LTR MaLR 6 467 0 434 267 60 33 chr2 175964003 175964153 -74723701 - MIR SINE MIR -106 156 3 375 310 47 22 chr2 175964807 175964990 -74722864 - MIR SINE MIR -52 210 16 1669 119 19 15 chr2 175965452 175965713 -74722141 - AluSx SINE Alu -49 263 2 22 0 0 0 chr2 175966585 175966607 -74721247 + AT_rich Low_complexity Low_complexity 1 22 0 1091 71 173 0 chr2 175967236 175967404 -74720450 + AluY SINE Alu 115 311 0 2551 65 0 0 chr2 175969242 175969549 -74718305 + AluY SINE Alu 1 307 -4 212 369 62 68 chr2 175969769 175970138 -74717716 + L2 LINE L2 2901 3267 -5 3740 168 87 96 chr2 175971596 175971948 -74715906 + L1MC3 LINE L1 6758 7112 -673 251 321 0 12 chr2 175971948 175972032 -74715822 + MLT1F1 LTR MaLR 43 125 -442 3740 168 87 96 chr2 175972032 175972477 -74715377 + L1MC3 LINE L1 7112 7630 -155 2812 123 7 9 chr2 175972477 175972906 -74714948 + MSTA LTR MaLR 1 428 0 3740 168 87 96 chr2 175972906 175973060 -74714794 + L1MC3 LINE L1 7630 7784 -1 29 28 0 0 chr2 175973827 175973863 -74713991 + AT_rich Low_complexity Low_complexity 1 36 0 274 302 103 35 chr2 175975286 175975402 -74712452 - MIR SINE MIR -23 239 116 235 369 0 12 chr2 175975928 175976012 -74711842 - MIR SINE MIR -160 102 20 429 36 0 0 chr2 175976586 175976641 -74711213 + (CA)n Simple_repeat Simple_repeat 2 56 0 1007 319 103 54 chr2 175976959 175977823 -74710031 + L3 LINE CR1 423 1342 -235 739 141 0 31 chr2 175977821 175977949 -74709905 - FAM SINE Alu -3 46 1 * 1056 159 0 23 chr2 175977828 175978004 -74709850 - FAM SINE Alu 0 175 4 278 333 42 0 chr2 175979598 175979694 -74708160 - MIR3 SINE MIR -54 154 55 236 233 216 30 chr2 175982945 175983177 -74704677 + L1ME4a LINE L1 5843 6117 -4 183 259 0 0 chr2 175983183 175983241 -74704613 + (TA)n Simple_repeat Simple_repeat 1 58 0 248 0 31 0 chr2 175983837 175983869 -74703985 + (TTG)n Simple_repeat Simple_repeat 1 33 0 218 259 17 161 chr2 175984857 175985031 -74702823 + MIR SINE MIR 54 202 -60 2691 175 76 29 chr2 175985032 175985668 -74702186 + L1MC3 LINE L1 6133 6333 0 230 366 107 0 chr2 175986106 175986218 -74701636 + L2 LINE L2 2932 3055 -217 2485 183 83 70 chr2 175987852 175988622 -74699232 + L1MDa LINE L1 1799 2558 -3982 2093 132 7 0 chr2 175988622 175988911 -74698943 + AluSx SINE Alu 1 291 -21 261 57 0 0 chr2 175988912 175988947 -74698907 + (CA)n Simple_repeat Simple_repeat 2 36 0 2485 183 83 70 chr2 175988947 175988985 -74698869 + L1MDa LINE L1 2557 2619 -3921 1363 215 175 21 chr2 175988987 175989410 -74698444 + L1MD2 LINE L1 5859 6346 -13 1254 100 5 4 chr2 175989571 175989821 -74698033 + AluSq SINE Alu 1 315 0 1124 80 7 20 chr2 175991564 175991715 -74696139 - AluSg/x SINE Alu -16 296 148 2059 132 10 10 chr2 175994210 175994514 -74693340 - AluSx SINE Alu -8 304 1 606 132 0 0 chr2 175994652 175994743 -74693111 - 5S rRNA rRNA -30 91 1 2252 87 0 39 chr2 175996802 175997113 -74690741 - AluSc SINE Alu -5 304 6 1113 180 23 108 chr2 175997207 175997405 -74690449 + L1MA9 LINE L1 5958 6116 -196 503 31 15 0 chr2 175997405 175997470 -74690384 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 1113 180 23 108 chr2 175997470 175997615 -74690239 + L1MA9 LINE L1 6116 6272 -40 219 287 259 21 chr2 175998784 175998927 -74688927 - L2 LINE L2 -9 3304 3128 854 312 177 12 chr2 175999049 175999795 -74688059 - L2 LINE L2 -266 3006 2141 299 247 158 32 chr2 176000680 176000838 -74687016 - L3 LINE CR1 -336 1241 1064 228 373 73 27 chr2 176000975 176001195 -74686659 + LTR16C LTR ERVL 160 389 -102 2187 123 3 3 chr2 176001933 176002241 -74685613 - AluSq SINE Alu -5 308 1 5697 159 8 5 chr2 176002340 176003884 -74683970 + L1PB3 LINE L1 4577 6127 -27 1679 187 14 10 chr2 176003884 176004195 -74683659 + AluJb SINE Alu 2 313 0 387 355 64 36 chr2 176004473 176004724 -74683130 - L3 LINE CR1 -1 1576 1319 457 308 144 39 chr2 176004742 176005227 -74682627 - L3 LINE CR1 -472 1105 525 1830 164 0 3 chr2 176005229 176005515 -74682339 + AluJb SINE Alu 1 285 -27 29 28 0 0 chr2 176005515 176005551 -74682303 + AT_rich Low_complexity Low_complexity 1 36 0 260 328 73 49 chr2 176005551 176005755 -74682099 - L3 LINE CR1 -1049 528 320 2116 81 0 0 chr2 176005968 176006229 -74681625 - AluSc SINE Alu -16 293 33 286 53 0 0 chr2 176006795 176006833 -74681021 + MADE1 DNA Mariner 1 38 -42 353 262 208 33 chr2 176007146 176007329 -74680525 - MIR SINE MIR 0 262 48 189 0 0 0 chr2 176007554 176007575 -74680279 + (TG)n Simple_repeat Simple_repeat 2 22 0 2320 131 86 8 chr2 176007705 176008102 -74679752 - MSTA LTR MaLR 0 428 1 361 265 41 0 chr2 176008481 176008579 -74679275 - L2 LINE L2 -3 3269 3168 446 326 142 35 chr2 176009032 176009461 -74678393 + L2 LINE L2 2838 3312 -1 180 325 167 8 chr2 176009528 176009648 -74678206 - L2 LINE L2 -193 3079 2941 243 349 118 42 chr2 176009716 176010046 -74677808 - L2 LINE L2 -465 2849 2495 696 319 142 35 chr2 176010066 176010699 -74677155 - L2 LINE L2 -927 2387 1687 518 280 154 28 chr2 176010731 176010945 -74676909 - MIR SINE MIR -7 255 15 834 271 106 20 chr2 176011001 176011293 -74676561 - L2 LINE L2 -12 3301 2985 279 265 122 14 chr2 176012177 176012324 -74675530 - HAL1b LINE L1 -7 1341 1179 27121 43 38 2 chr2 176012326 176015756 -74672098 + L1P LINE L1 1 3554 -2592 1319 217 0 24 chr2 176016272 176016562 -74671292 - AluJo SINE Alu -1 311 29 3173 80 0 0 chr2 176016662 176017114 -74670740 + L1PA2 LINE L1 2797 3248 -2898 18053 29 0 0 chr2 176017338 176020275 -74667579 + L1PA2 LINE L1 3220 6155 0 243 0 0 0 chr2 176020281 176020308 -74667546 + (TAA)n Simple_repeat Simple_repeat 2 28 0 464 224 0 40 chr2 176020393 176020518 -74667336 - L1PB4 LINE L1 -3 6153 6034 26 50 0 0 chr2 176020518 176020558 -74667296 + AT_rich Low_complexity Low_complexity 1 40 0 1702 127 12 4 chr2 176020590 176020870 -74666984 - AluSx SINE Alu 0 320 39 733 268 152 18 chr2 176020904 176021517 -74666337 - HAL1b LINE L1 -261 1087 393 1544 174 3 57 chr2 176021556 176021854 -74666000 + AluJo SINE Alu 10 291 -21 24 0 0 0 chr2 176021856 176021880 -74665974 + AT_rich Low_complexity Low_complexity 1 24 0 208 215 15 77 chr2 176022723 176022788 -74665066 + L3 LINE CR1 1515 1575 -2 189 271 68 0 chr2 176023177 176023236 -74664618 + L2 LINE L2 3206 3268 -4 21 36 0 0 chr2 176023320 176023348 -74664506 + AT_rich Low_complexity Low_complexity 1 28 0 2325 86 10 0 chr2 176023858 176024160 -74663694 + AluSc SINE Alu 1 305 -4 247 321 155 4 chr2 176024361 176024613 -74663241 - L2 LINE L2 -1191 2123 1834 441 298 38 0 chr2 176025731 176025862 -74661992 + MIR SINE MIR 14 149 -113 21 36 0 0 chr2 176026449 176026477 -74661377 + AT_rich Low_complexity Low_complexity 1 28 0 235 286 130 0 chr2 176027816 176027893 -74659961 + L2 LINE L2 3227 3313 0 21143 166 24 13 chr2 176029007 176030011 -74657843 + L1MA3 LINE L1 12 1003 -6707 2290 115 43 0 chr2 176030011 176030359 -74657495 - THE1B LTR MaLR 0 364 2 21143 166 24 13 chr2 176030359 176036950 -74650904 + L1MA3 LINE L1 1003 7710 0 231 311 0 0 chr2 176037174 176037235 -74650619 - MIR3 SINE MIR -5 203 143 2469 63 0 19 chr2 176037386 176037703 -74650151 - AluY SINE Alu 0 311 1 281 400 47 7 chr2 176038271 176038421 -74649433 - MIR3 SINE MIR -6 202 47 535 262 124 14 chr2 176039513 176039723 -74648131 - MIR SINE MIR -27 235 3 234 188 234 0 chr2 176041099 176041163 -74646691 + L2 LINE L2 3234 3312 -1 528 398 30 6 chr2 176041197 176041561 -74646293 + L3 LINE CR1 1139 1511 -66 21 0 0 0 chr2 176041709 176041730 -74646124 + AT_rich Low_complexity Low_complexity 1 21 0 254 28 0 28 chr2 176041760 176041796 -74646058 + (CA)n Simple_repeat Simple_repeat 2 36 0 31 26 0 0 chr2 176042936 176042974 -74644880 + AT_rich Low_complexity Low_complexity 1 38 0 2227 224 10 24 chr2 176044840 176045348 -74642506 + LTR31 LTR ERV1 104 604 -15 184 374 55 0 chr2 176045392 176045483 -74642371 - L2 LINE L2 -209 3063 2968 239 317 10 30 chr2 176047545 176047646 -74640208 - L2 LINE L2 -820 2494 2396 2522 62 0 0 chr2 176048230 176048536 -74639318 - AluY SINE Alu -5 306 1 181 380 30 30 chr2 176050084 176050184 -74637670 - MIR SINE MIR -151 111 12 247 366 84 15 chr2 176053232 176053434 -74634420 + L3b LINE CR1 1355 1570 -13 346 230 58 100 chr2 176054933 176055041 -74632813 - MIR SINE MIR -46 216 108 2224 59 10 19 chr2 176055041 176055348 -74632506 + AluY SINE Alu 1 304 -7 346 230 58 100 chr2 176055348 176055438 -74632416 - MIR SINE MIR -154 108 16 251 347 65 8 chr2 176056016 176056140 -74631714 + MIR SINE MIR 13 143 -119 22 35 0 0 chr2 176058918 176058947 -74628907 + AT_rich Low_complexity Low_complexity 1 29 0 541 304 10 44 chr2 176060035 176060239 -74627615 + MIR3 SINE MIR 3 199 -9 280 308 64 4 chr2 176061146 176061332 -74626522 + MIR SINE MIR 6 262 0 253 324 15 0 chr2 176061586 176061654 -74626200 + L2 LINE L2 2988 3056 -216 198 256 0 141 chr2 176061772 176061850 -74626004 - L2 LINE L2 0 3313 3247 890 277 64 4 chr2 176062028 176062263 -74625591 - MIR SINE MIR 0 262 14 275 250 0 0 chr2 176063315 176063367 -74624487 + G-rich Low_complexity Low_complexity 4 55 0 189 108 108 0 chr2 176064201 176064238 -74623616 - L2 LINE L2 0 3313 3273 2800 3 0 0 chr2 176064256 176064556 -74623298 + AluYa5 SINE Alu 1 300 -11 247 280 161 25 chr2 176065306 176065424 -74622430 - L2 LINE L2 0 3313 3180 288 288 74 25 chr2 176065522 176065685 -74622169 + Charlie8 DNA MER1_type 22 192 -2225 234 288 17 0 chr2 176065855 176065914 -74621940 + MLT1G LTR MaLR 307 366 -224 286 372 47 33 chr2 176065915 176066130 -74621724 - L2 LINE L2 -541 2773 2556 216 282 0 0 chr2 176066391 176066462 -74621392 + MIR SINE MIR 136 206 -56 582 254 10 28 chr2 176066462 176066609 -74621245 - MLT1G LTR MaLR -124 471 314 1105 268 63 83 chr2 176066618 176067122 -74620732 + MLT1G LTR MaLR 15 489 -101 2192 152 29 0 chr2 176067201 176067549 -74620305 + THE1B LTR MaLR 7 364 0 1086 225 36 20 chr2 176067549 176067798 -74620056 + MLT1G LTR MaLR 282 534 -56 277 98 24 0 chr2 176067797 176067838 -74620016 - Alu SINE Alu -251 48 7 * 234 336 67 53 chr2 176067908 176068268 -74619586 - L2 LINE L2 -1046 2268 1904 2133 133 13 0 chr2 176068320 176068628 -74619226 - AluSx SINE Alu 0 312 1 247 189 0 0 chr2 176068844 176068897 -74618957 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 195 42 0 0 chr2 176068993 176069017 -74618837 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 204 268 24 12 chr2 176069205 176069287 -74618567 + (CATATA)n Simple_repeat Simple_repeat 3 85 0 335 250 122 40 chr2 176069288 176069436 -74618418 + HAL1b LINE L1 1189 1348 0 23 0 0 0 chr2 176069459 176069482 -74618372 + AT_rich Low_complexity Low_complexity 1 23 0 331 42 0 0 chr2 176069783 176069831 -74618023 + L1PA3 LINE L1 6108 6155 0 180 0 0 0 chr2 176070267 176070287 -74617567 + (A)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr2 176070374 176070396 -74617458 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr2 176071619 176071648 -74616206 + AT_rich Low_complexity Low_complexity 1 29 0 427 279 32 13 chr2 176073164 176073322 -74614532 - HAL1 LINE L1 -770 1737 1577 * 21936 141 34 14 chr2 176073317 176077470 -74610384 + L1M1 LINE L1 8 4249 -3316 2213 128 3 0 chr2 176077470 176077782 -74610072 + AluSp SINE Alu 1 313 0 341 131 16 0 chr2 176077790 176077851 -74610003 + GA-rich Low_complexity Low_complexity 3 64 0 1412 234 14 11 chr2 176077888 176078259 -74609595 + L1M1 LINE L1 4268 4639 -2926 505 198 143 4 chr2 176078572 176078810 -74609044 + AluSp SINE Alu 22 292 -21 300 175 0 0 chr2 176078835 176078898 -74608956 + GA-rich Low_complexity Low_complexity 4 66 0 12376 164 11 16 chr2 176078937 176081528 -74606326 + L1MA3 LINE L1 2849 5419 -886 2008 127 0 3 chr2 176081528 176081837 -74606017 + AluSx SINE Alu 1 308 0 12376 164 11 16 chr2 176081837 176082712 -74605142 + L1MA3 LINE L1 5419 6297 -8 30 0 0 0 chr2 176082712 176082742 -74605112 + AT_rich Low_complexity Low_complexity 1 30 0 2101 119 0 19 chr2 176082866 176083176 -74604678 - AluSg SINE Alu -6 304 1 309 325 16 41 chr2 176083176 176083292 -74604562 - HAL1 LINE L1 -1059 1448 1334 182 36 0 36 chr2 176085390 176085418 -74602436 + (GGAA)n Simple_repeat Simple_repeat 3 29 0 180 333 58 50 chr2 176085995 176086115 -74601739 + MIR3 SINE MIR 85 205 -3 1752 240 85 24 chr2 176087362 176087937 -74599917 + L1ME3A LINE L1 5460 6069 -101 598 319 21 13 chr2 176088240 176088478 -74599376 + LTR16A1 LTR ERVL 218 457 0 2100 135 10 0 chr2 176089160 176089457 -74598397 - AluSx SINE Alu -12 300 1 6110 45 6 24 chr2 176089813 176090606 -74597248 + L1PA7 LINE L1 5328 6106 -48 27 29 0 0 chr2 176090641 176090675 -74597179 + AT_rich Low_complexity Low_complexity 1 34 0 296 278 11 0 chr2 176090679 176090769 -74597085 + L1ME4a LINE L1 5961 6051 -70 498 231 31 23 chr2 176091950 176092080 -74595774 - MER119 DNA MER1_type 0 583 453 400 176 94 12 chr2 176092080 176092165 -74595689 - MER119 DNA MER1_type -450 133 42 311 121 17 0 chr2 176092213 176092271 -74595583 + (TG)n Simple_repeat Simple_repeat 1 59 0 1665 174 0 41 chr2 176093068 176093385 -74594469 - AluJo SINE Alu -7 305 2 374 0 22 0 chr2 176093485 176093531 -74594323 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 198 171 24 0 chr2 176093636 176093677 -74594177 - L2 LINE L2 -26 3246 3205 322 185 98 0 chr2 176093790 176093882 -74593972 + MIR3 SINE MIR 94 194 -14 241 200 0 67 chr2 176094342 176094402 -74593452 - MIR SINE MIR -129 133 78 329 247 71 59 chr2 176095052 176095204 -74592650 + MIR SINE MIR 53 206 -2 1704 153 24 10 chr2 176096835 176097130 -74590724 + MSTA LTR MaLR 1 299 -129 274 248 87 43 chr2 176097187 176097348 -74590506 + MLT1K LTR MaLR 386 553 -35 1228 189 8 34 chr2 176097564 176097802 -74590052 + AluJo SINE Alu 1 232 -80 888 53 0 0 chr2 176097813 176097927 -74589927 + (GAAA)n Simple_repeat Simple_repeat 3 116 0 186 71 0 0 chr2 176098823 176098851 -74589003 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2799 151 13 2 chr2 176099298 176099749 -74588105 + MER44D DNA MER2_type 277 604 -1 34 42 0 0 chr2 176100188 176100236 -74587618 + AT_rich Low_complexity Low_complexity 1 48 0 323 246 94 21 chr2 176100705 176100896 -74586958 + LTR37B LTR ERV1 264 468 0 3358 187 63 1 chr2 176101164 176101812 -74586042 + MER44D DNA MER2_type 10 697 -8 600 325 20 22 chr2 176104285 176104740 -74583114 - MLT1G1-int LTR MaLR -796 575 2 1770 284 53 29 chr2 176104741 176105322 -74582532 - MLT1G1 LTR MaLR 0 595 1 301 200 0 33 chr2 176105623 176105683 -74582171 - L2 LINE L2 -1 3312 3255 4372 175 17 50 chr2 176105794 176106449 -74581405 + L1MB8 LINE L1 4935 5526 -652 2290 110 0 3 chr2 176106449 176106749 -74581105 + AluSc SINE Alu 1 299 -10 4372 175 17 50 chr2 176106749 176107374 -74580480 + L1MB8 LINE L1 5526 6170 -8 1805 184 7 0 chr2 176107666 176107965 -74579889 + AluJb SINE Alu 1 301 -11 213 250 19 0 chr2 176109418 176109470 -74578384 + (CATA)n Simple_repeat Simple_repeat 1 53 0 451 227 67 40 chr2 176110016 176110166 -74577688 - MIR SINE MIR -2 260 107 357 209 209 82 chr2 176112793 176112951 -74574903 + MER5A DNA MER1_type 12 189 0 214 277 31 0 chr2 176114346 176114411 -74573443 + L2 LINE L2 2996 3062 -251 5210 30 7 0 chr2 176114818 176115428 -74572426 + L1PA4 LINE L1 5540 6153 -2 25 51 0 0 chr2 176115807 176115846 -74572008 + AT_rich Low_complexity Low_complexity 1 39 0 29 0 0 0 chr2 176117323 176117352 -74570502 + AT_rich Low_complexity Low_complexity 1 29 0 540 150 0 0 chr2 176117361 176117441 -74570413 + FLAM SINE Alu 46 125 -18 2704 7 0 3 chr2 176117613 176117909 -74569945 + AluYa5 SINE Alu 1 295 -16 23 0 0 0 chr2 176118905 176118928 -74568926 + AT_rich Low_complexity Low_complexity 1 23 0 2512 73 0 0 chr2 176119803 176120105 -74567749 - AluY SINE Alu -7 304 3 2086 104 35 0 chr2 176120255 176120542 -74567312 - AluSx SINE Alu -10 302 6 215 189 337 53 chr2 176120838 176120933 -74566921 + L2 LINE L2 3151 3272 0 181 279 0 0 chr2 176121292 176121335 -74566519 - L2 LINE L2 -3 3269 3227 21 36 0 0 chr2 176122341 176122369 -74565485 + AT_rich Low_complexity Low_complexity 1 28 0 1236 117 0 0 chr2 176123706 176123868 -74563986 - AluSg/x SINE Alu -16 296 135 201 158 0 26 chr2 176123911 176123949 -74563905 - MIR SINE MIR -62 146 110 2334 101 0 0 chr2 176125148 176125446 -74562408 - AluSx SINE Alu -14 298 1 1814 166 0 14 chr2 176125451 176125735 -74562119 - AluJo SINE Alu -23 289 10 266 194 15 0 chr2 176126062 176126129 -74561725 + (TA)n Simple_repeat Simple_repeat 2 69 0 210 207 0 0 chr2 176126665 176126723 -74561131 + (TA)n Simple_repeat Simple_repeat 2 59 0 600 169 12 100 chr2 176128715 176128875 -74558979 + FRAM SINE Alu 20 165 -11 180 358 0 15 chr2 176128938 176129005 -74558849 - L2 LINE L2 -466 2848 2783 239 350 66 33 chr2 176129980 176130163 -74557691 - L2 LINE L2 -1736 1578 1390 222 281 194 43 chr2 176132003 176132441 -74555413 + L2 LINE L2 1249 1752 -1562 2292 71 0 0 chr2 176133715 176134022 -74553832 + AluY SINE Alu 1 307 0 28 29 0 0 chr2 176134482 176134517 -74553337 + AT_rich Low_complexity Low_complexity 1 35 0 218 258 194 0 chr2 176134813 176134875 -74552979 + L2 LINE L2 3149 3222 -50 184 172 17 121 chr2 176135241 176135299 -74552555 + MIR SINE MIR 122 173 -89 188 107 0 0 chr2 176135669 176135697 -74552157 + MIR SINE MIR 98 125 -83 25 31 0 0 chr2 176138803 176138835 -74549019 + AT_rich Low_complexity Low_complexity 1 32 0 896 107 14 14 chr2 176138852 176138992 -74548862 - AluJb SINE Alu -171 141 2 22 0 0 0 chr2 176139613 176139635 -74548219 + AT_rich Low_complexity Low_complexity 1 22 0 1819 157 10 7 chr2 176140318 176140624 -74547230 - AluJo SINE Alu -5 307 1 207 276 105 26 chr2 176140889 176140965 -74546889 + MIR3 SINE MIR 124 205 -3 2089 123 13 3 chr2 176141733 176142033 -74545821 + AluSg SINE Alu 1 303 -7 183 129 0 0 chr2 176143550 176143581 -74544273 + (GGGA)n Simple_repeat Simple_repeat 3 33 0 270 287 174 0 chr2 176143763 176143878 -74543976 + MIR SINE MIR 114 248 -14 400 282 45 18 chr2 176144192 176144302 -74543552 - MIR SINE MIR -148 114 2 217 191 21 0 chr2 176145340 176145387 -74542467 + (TA)n Simple_repeat Simple_repeat 2 49 0 1385 211 42 28 chr2 176147244 176147528 -74540326 - AluJb SINE Alu -24 288 1 273 57 0 0 chr2 176147784 176147819 -74540035 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 197 333 95 0 chr2 176148883 176148967 -74538887 + L2 LINE L2 3180 3271 -1 21 36 0 0 chr2 176155243 176155271 -74532583 + GC_rich Low_complexity Low_complexity 1 28 0 228 157 0 57 chr2 176155287 176155357 -74532497 + G-rich Low_complexity Low_complexity 5 70 0 2231 100 3 3 chr2 176157992 176158293 -74529561 + AluSp SINE Alu 1 301 -12 385 341 73 10 chr2 176158368 176158573 -74529281 + MIR SINE MIR 2 219 -43 21 36 0 0 chr2 176161378 176161406 -74526448 + AT_rich Low_complexity Low_complexity 1 28 0 602 226 119 44 chr2 176162609 176162835 -74525019 - MIR SINE MIR -14 248 6 330 309 72 22 chr2 176162980 176163119 -74524735 - MIR3 SINE MIR -54 154 9 1467 178 138 0 chr2 176163157 176163461 -74524393 + MER7A DNA MER2_type 3 346 0 281 241 139 0 chr2 176163906 176163985 -74523869 - L2 LINE L2 0 3313 3224 189 107 0 0 chr2 176164038 176164066 -74523788 + (TCC)n Simple_repeat Simple_repeat 2 29 0 229 309 64 58 chr2 176167122 176167310 -74520544 - L2 LINE L2 -885 2429 2241 387 0 0 0 chr2 176167337 176167380 -74520474 + (TG)n Simple_repeat Simple_repeat 2 44 0 227 372 89 6 chr2 176167479 176167659 -74520195 + L2 LINE L2 1894 2088 -1226 2343 288 78 6 chr2 176167775 176168612 -74519242 - L2 LINE L2 -580 2734 1838 320 252 9 78 chr2 176168897 176169012 -74518842 - L1MC4 LINE L1 -1322 6720 6614 344 267 0 11 chr2 176169028 176169118 -74518736 - L1MC4 LINE L1 -1339 6703 6615 300 318 23 0 chr2 176169067 176169155 -74518699 + L1MC4 LINE L1 6614 6703 -1339 * 425 165 22 0 chr2 176169157 176169248 -74518606 + (CATA)n Simple_repeat Simple_repeat 4 96 0 494 242 181 16 chr2 176169693 176169875 -74517979 - MIR SINE MIR -49 213 2 238 261 59 81 chr2 176170256 176170478 -74517376 - L2 LINE L2 -2453 861 645 303 246 0 15 chr2 176171417 176171482 -74516372 + MLT1L LTR MaLR 361 424 -191 262 250 0 0 chr2 176171485 176171545 -74516309 + MER53 DNA DNA 2 61 -128 519 290 43 11 chr2 176171643 176171829 -74516025 + MLT1L LTR MaLR 422 613 -2 427 147 0 0 chr2 176173876 176173951 -74513903 + Alu SINE Alu 238 312 0 223 274 0 0 chr2 176175316 176175378 -74512476 + (TA)n Simple_repeat Simple_repeat 2 63 0 21 0 0 0 chr2 176175478 176175499 -74512355 + AT_rich Low_complexity Low_complexity 1 21 0 883 113 27 0 chr2 176175532 176175682 -74512172 + L1MA5 LINE L1 6145 6298 -2 2272 83 3 17 chr2 176177561 176177863 -74509991 - AluY SINE Alu -13 298 1 922 224 6 17 chr2 176177954 176178133 -74509721 - MER58A DNA MER1_type -47 177 1 3825 86 79 0 chr2 176179902 176180459 -74507395 - L1PA14 LINE L1 -3 6158 5558 215 324 59 104 chr2 176180981 176181386 -74506468 + L2 LINE L2 2826 3212 -60 316 258 189 0 chr2 176181415 176181547 -74506307 + MIR SINE MIR 20 176 -86 806 282 26 13 chr2 176181561 176181788 -74506066 - MIR SINE MIR -30 232 3 1618 162 9 89 chr2 176183095 176183422 -74504432 + AluJb SINE Alu 1 301 -11 452 307 26 32 chr2 176184307 176184496 -74503358 - MIR3 SINE MIR -7 201 14 21 82 0 0 chr2 176186057 176186106 -74501748 + AT_rich Low_complexity Low_complexity 1 49 0 318 233 0 14 chr2 176186146 176186219 -74501635 + MIR SINE MIR 66 137 -125 353 239 53 80 chr2 176186373 176186486 -74501368 - L2 LINE L2 -11 3302 3193 206 32 32 0 chr2 176187239 176187270 -74500584 + (CAGTG)n Simple_repeat Simple_repeat 3 34 0 1459 293 79 62 chr2 176187557 176188237 -74499617 + MER115 DNA AcHobo 2 693 0 28 0 0 0 chr2 176189012 176189040 -74498814 + AT_rich Low_complexity Low_complexity 1 28 0 202 288 34 0 chr2 176190106 176190165 -74497689 + L2 LINE L2 2912 2972 -342 259 215 37 0 chr2 176190187 176190331 -74497523 + (CTATA)n Simple_repeat Simple_repeat 1 149 0 454 314 92 8 chr2 176190357 176190596 -74497258 + L2 LINE L2 3055 3313 0 4376 163 66 21 chr2 176190911 176192132 -74495722 + L1MB8 LINE L1 4903 6177 -1 457 250 33 8 chr2 176192818 176192938 -74494916 - L2 LINE L2 -557 2757 2635 240 164 180 0 chr2 176193261 176193322 -74494532 + LTR48B LTR ERV1 529 600 -44 340 241 163 30 chr2 176193394 176193560 -74494294 - L2 LINE L2 -682 2632 2445 2371 75 7 0 chr2 176194520 176194815 -74493039 + AluSc SINE Alu 3 299 -10 22 0 0 0 chr2 176196543 176196565 -74491289 + AT_rich Low_complexity Low_complexity 1 22 0 532 239 25 36 chr2 176196930 176197088 -74490766 - MIR3 SINE MIR -13 195 44 23 68 0 0 chr2 176198354 176198398 -74489456 + AT_rich Low_complexity Low_complexity 1 44 0 25 31 0 0 chr2 176199644 176199676 -74488178 + AT_rich Low_complexity Low_complexity 1 32 0 703 262 17 12 chr2 176199700 176199847 -74488007 - MIR SINE MIR -82 180 30 1677 230 6 0 chr2 176199847 176200186 -74487668 - MER58B DNA MER1_type 0 341 1 703 262 17 12 chr2 176200186 176200210 -74487644 - MIR SINE MIR -232 30 8 313 208 13 13 chr2 176200340 176200417 -74487437 + MER116 DNA Mariner 4 80 0 218 357 129 14 chr2 176200432 176200572 -74487282 + L3 LINE CR1 1415 1570 -7 412 336 31 10 chr2 176200657 176200816 -74487038 - MIR SINE MIR -62 200 42 1392 186 80 4 chr2 176201254 176201548 -74486306 + AluJb SINE Alu 1 314 0 180 263 0 0 chr2 176201805 176201881 -74485973 + T-rich Low_complexity Low_complexity 1 76 0 785 182 85 12 chr2 176202383 176202548 -74485306 - MER20 DNA MER1_type 0 219 43 640 176 64 0 chr2 176203022 176203147 -74484707 + FLAM_C SINE Alu 1 133 0 422 315 84 78 chr2 176203171 176203492 -74484362 + L3 LINE CR1 185 507 -1070 698 251 24 29 chr2 176207254 176207461 -74480393 + MIR SINE MIR 57 262 0 2324 95 0 3 chr2 176208851 176209146 -74478708 + AluSx SINE Alu 1 294 -18 272 364 87 12 chr2 176209350 176209523 -74478331 - MER5A DNA MER1_type -3 186 1 741 285 28 24 chr2 176209884 176210175 -74477679 + L2 LINE L2 2995 3286 -27 369 0 0 0 chr2 176211287 176211328 -74476526 + (CA)n Simple_repeat Simple_repeat 2 42 0 323 305 71 52 chr2 176211388 176211542 -74476312 - MIR SINE MIR -101 161 5 1720 150 60 44 chr2 176212448 176212815 -74475039 + THE1C LTR MaLR 3 375 0 231 157 0 0 chr2 176212852 176212903 -74474951 + A-rich Low_complexity Low_complexity 1 51 0 889 294 158 24 chr2 176213268 176213723 -74474131 + MLT1G LTR MaLR 68 583 -7 531 272 85 51 chr2 176216434 176216765 -74471089 + LTR16A LTR ERVL 9 350 -107 298 279 21 82 chr2 176217378 176217611 -74470243 + ERVL LTR ERVL 5132 5350 -414 2312 80 3 7 chr2 176218304 176218603 -74469251 - AluY SINE Alu -13 298 1 201 349 12 0 chr2 176218762 176218845 -74469009 + MIR SINE MIR 127 210 -52 10660 59 7 2 chr2 176219075 176220464 -74467390 + L1P LINE L1 3166 4560 -1586 2516 174 59 35 chr2 176220888 176221200 -74466654 - L1MC3 LINE L1 -1 7784 7450 1674 153 65 7 chr2 176221200 176221494 -74466360 - AluJb SINE Alu -1 311 1 2516 174 59 35 chr2 176221494 176221772 -74466082 - L1MC3 LINE L1 -335 7450 7180 834 198 21 36 chr2 176222337 176222529 -74465325 + MER5A DNA MER1_type 1 189 0 227 246 0 0 chr2 176222529 176222586 -74465268 + MLT1L LTR MaLR 554 610 -5 644 284 123 30 chr2 176222687 176222923 -74464931 + MIR SINE MIR 5 262 0 3836 62 14 2 chr2 176223380 176223882 -74463972 + L1PA6 LINE L1 5644 6151 -3 1147 197 58 10 chr2 176224277 176224696 -74463158 + MLT1C LTR MaLR 3 461 -6 6868 53 5 1 chr2 176226710 176228111 -74459743 + L1PA6 LINE L1 4731 6139 -15 2285 90 3 0 chr2 176228873 176229163 -74458691 + AluY SINE Alu 1 291 -20 797 222 0 38 chr2 176229314 176229499 -74458355 - FRAM SINE Alu -1 175 1 379 279 224 15 chr2 176229534 176229735 -74458119 - MIR SINE MIR -14 248 6 512 231 33 16 chr2 176230948 176231069 -74456785 + MER20 DNA MER1_type 7 129 -90 274 245 28 47 chr2 176231191 176231297 -74456557 - MER74A LTR ERVL -162 396 293 449 149 19 65 chr2 176231469 176231576 -74456278 + MER20 DNA MER1_type 118 219 0 1415 139 116 12 chr2 176231994 176232252 -74455602 + MSTA LTR MaLR 1 285 -143 5629 87 21 17 chr2 176232291 176233356 -74454498 - L1PA8A LINE L1 -28 6103 5042 244 285 36 58 chr2 176233486 176233623 -74454231 + MIR SINE MIR 119 252 -10 1651 177 0 39 chr2 176234333 176234643 -74453211 - AluJo SINE Alu -14 298 1 18119 132 9 13 chr2 176236298 176239359 -74448495 + L1P LINE L1 11 3059 -3087 406 263 152 20 chr2 176241621 176241805 -74446049 - MIR SINE MIR -4 258 55 271 248 63 151 chr2 176242341 176242579 -74445275 - L2 LINE L2 -186 3086 2870 3381 87 34 0 chr2 176242828 176243299 -74444555 - L1PA10 LINE L1 -16 6152 5666 900 208 33 0 chr2 176243408 176243591 -74444263 - MER5A DNA MER1_type 0 189 1 1225 136 42 4 chr2 176244285 176244521 -74443333 - L1MC3 LINE L1 -594 7191 6947 7096 174 21 72 chr2 176244563 176246303 -74441551 - L1MC3 LINE L1 -785 7000 5350 313 289 58 33 chr2 176246665 176246786 -74441068 + MIR3 SINE MIR 72 195 -13 295 306 150 31 chr2 176249326 176249519 -74438335 - MIR SINE MIR -42 220 5 672 279 119 19 chr2 176250353 176250815 -74437039 - MER115 DNA AcHobo 0 693 151 26 0 0 0 chr2 176251513 176251539 -74436315 + AT_rich Low_complexity Low_complexity 1 26 0 188 342 77 0 chr2 176251910 176252013 -74435841 - MIR SINE MIR -90 118 10 345 356 44 19 chr2 176252124 176252284 -74435570 - MIR3 SINE MIR -15 193 30 694 167 0 0 chr2 176253691 176253799 -74434055 - FLAM_C SINE Alu -35 108 1 1592 192 40 3 chr2 176254004 176254327 -74433527 + LTR32 LTR ERVL 15 349 -122 644 168 77 7 chr2 176254424 176254567 -74433287 + LTR32 LTR ERVL 319 471 0 22 0 0 0 chr2 176254857 176254879 -74432975 + AT_rich Low_complexity Low_complexity 1 22 0 191 354 73 0 chr2 176254915 176254997 -74432857 + L2 LINE L2 2447 2534 -780 1926 252 84 16 chr2 176255006 176255207 -74432647 + L1MEc LINE L1 1715 1901 -4314 2163 117 7 3 chr2 176255207 176255507 -74432347 + AluSq SINE Alu 1 301 -12 1926 252 84 16 chr2 176255507 176256617 -74431237 + L1MEc LINE L1 1901 3079 -3136 1359 256 74 49 chr2 176256635 176257371 -74430483 + L2 LINE L2 2529 3291 -22 1991 150 0 0 chr2 176258195 176258495 -74429359 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr2 176260448 176260470 -74427384 + AT_rich Low_complexity Low_complexity 1 22 0 1247 193 81 127 chr2 176260626 176260751 -74427103 - LTR40b LTR ERVL 0 462 333 1880 141 30 30 chr2 176260751 176261112 -74426742 - MER46B DNA MER2_type 0 236 1 1247 193 81 127 chr2 176261112 176261467 -74426387 - LTR40b LTR ERVL -129 333 4 397 219 18 35 chr2 176261468 176261582 -74426272 - MIR SINE MIR -93 169 58 493 368 35 13 chr2 176264712 176265030 -74422824 + L2 LINE L2 2109 2433 -881 416 334 117 46 chr2 176265152 176265713 -74422141 + L2 LINE L2 2684 3272 0 288 354 0 0 chr2 176267506 176267605 -74420249 + MIR SINE MIR 157 255 -7 4138 108 15 52 chr2 176267606 176268285 -74419569 - L1PA13 LINE L1 -2 6161 5508 1499 164 50 14 chr2 176268772 176269053 -74418801 - AluJo SINE Alu -21 291 1 1889 220 95 18 chr2 176270652 176271221 -74416633 - LTR48B LTR ERV1 0 644 32 1778 108 4 4 chr2 176271227 176271476 -74416378 - AluSq SINE Alu -64 249 1 2189 144 0 3 chr2 176272426 176272739 -74415115 + AluSx SINE Alu 1 312 0 329 200 33 44 chr2 176273126 176273216 -74414638 - MIR SINE MIR -66 196 108 16311 42 8 0 chr2 176273992 176276782 -74411072 - L1PA4 LINE L1 0 6155 3351 3408 45 2 2 chr2 176276882 176277352 -74410502 - L1PA4 LINE L1 -2794 3352 2883 194 105 26 0 chr2 176278204 176278242 -74409612 + (TG)n Simple_repeat Simple_repeat 2 40 0 697 385 65 40 chr2 176279940 176280336 -74407518 + L2 LINE L2 1775 2160 -1154 2046 178 19 3 chr2 176280336 176280695 -74407159 + MLT1A1 LTR MaLR 1 365 0 697 385 65 40 chr2 176280695 176280919 -74406935 + L2 LINE L2 2160 2377 -937 4328 171 18 1 chr2 176280919 176281639 -74406215 - MER44D DNA MER2_type -1 604 1 697 385 65 40 chr2 176281639 176281978 -74405876 + L2 LINE L2 2377 2759 -555 2263 84 33 0 chr2 176282043 176282342 -74405512 + AluSg SINE Alu 1 309 -1 277 400 113 29 chr2 176282452 176282659 -74405195 + L2 LINE L2 2892 3161 -111 23 0 0 0 chr2 176282659 176282682 -74405172 + AT_rich Low_complexity Low_complexity 1 23 0 277 400 113 29 chr2 176282682 176282797 -74405057 + L2 LINE L2 3161 3265 -7 22 0 0 0 chr2 176283019 176283041 -74404813 + AT_rich Low_complexity Low_complexity 1 22 0 1725 183 0 7 chr2 176283653 176283967 -74403887 + AluJo SINE Alu 1 312 0 352 351 90 5 chr2 176284022 176284210 -74403644 - MIR SINE MIR -18 244 41 394 208 39 0 chr2 176288588 176288665 -74399189 + MER81 DNA DNA 32 111 -3 451 53 0 80 chr2 176292002 176292115 -74395739 + (TTCCC)n Simple_repeat Simple_repeat 2 105 0 1999 131 34 0 chr2 176292119 176292417 -74395437 - AluSx SINE Alu -4 308 1 454 331 57 60 chr2 176292546 176292915 -74394939 - L2 LINE L2 -87 3185 2818 11465 111 15 30 chr2 176293028 176295841 -74392013 + L1P3 LINE L1 185 3029 -3432 2189 150 31 16 chr2 176295841 176296222 -74391632 + MSTB LTR MaLR 40 426 0 831 292 99 16 chr2 176296408 176296947 -74390907 + L1ME3 LINE L1 5366 5951 -211 28 29 0 0 chr2 176297620 176297655 -74390199 + AT_rich Low_complexity Low_complexity 1 35 0 2025 127 3 3 chr2 176298183 176298504 -74389350 + AluSx SINE Alu 1 321 0 278 308 0 0 chr2 176298520 176298585 -74389269 + MIR SINE MIR 66 130 -78 2245 104 0 13 chr2 176298907 176299214 -74388640 + AluSq SINE Alu 1 303 -10 195 42 0 0 chr2 176299215 176299239 -74388615 + (CA)n Simple_repeat Simple_repeat 1 24 0 263 261 0 15 chr2 176301269 176301334 -74386520 + MIR3 SINE MIR 133 196 -12 289 247 0 26 chr2 176301562 176301639 -74386215 - L2 LINE L2 0 3313 3239 1215 144 43 19 chr2 176304455 176304640 -74383214 - L1MA7 LINE L1 -5 6286 6092 2537 127 36 10 chr2 176304640 176305057 -74382797 - MSTA LTR MaLR 0 428 1 1215 144 43 19 chr2 176305057 176305127 -74382727 - L1MA7 LINE L1 -199 6092 6025 302 176 29 0 chr2 176305227 176305295 -74382559 - MER116 DNA Mariner -6 74 5 264 230 127 32 chr2 176305311 176305437 -74382417 - MIR SINE MIR -1 261 124 1953 143 73 10 chr2 176305525 176305910 -74381944 + L1PBb LINE L1 543 951 -5253 36059 89 5 10 chr2 176306011 176312185 -74375669 - L1PA6 LINE L1 -2 6152 11 449 272 20 7 chr2 176312392 176312539 -74375315 + MLT1I LTR MaLR 59 207 -202 797 182 0 0 chr2 176312542 176312663 -74375191 - FLAM_A SINE Alu -12 121 1 692 274 79 26 chr2 176313319 176313659 -74374195 + ERVL LTR ERVL 3410 3767 -1229 598 347 32 24 chr2 176313792 176314132 -74373722 + ERVL LTR ERVL 4279 4621 -1143 758 318 24 44 chr2 176314152 176315086 -74372768 + ERVL LTR ERVL 4233 4996 0 1604 268 9 16 chr2 176315096 176315537 -74372317 + LTR16B LTR ERVL 27 464 0 23 0 0 0 chr2 176315777 176315800 -74372054 + AT_rich Low_complexity Low_complexity 1 23 0 2806 10 0 0 chr2 176315803 176316107 -74371747 + AluY SINE Alu 1 304 -7 308 313 94 0 chr2 176316472 176316600 -74371254 + MIR SINE MIR 52 191 -71 524 234 35 28 chr2 176317056 176317201 -74370653 + MLT1I LTR MaLR 62 207 -202 722 203 0 0 chr2 176317204 176317327 -74370527 - FLAM_A SINE Alu -10 123 1 248 184 102 51 chr2 176317415 176317513 -74370341 + MLT1I LTR MaLR 307 409 0 964 276 85 56 chr2 176319861 176320400 -74367454 + MLT1H1 LTR MaLR 1 555 0 255 256 45 150 chr2 176320507 176320550 -74367304 + MIR SINE MIR 25 71 -191 2316 101 0 7 chr2 176320550 176320856 -74366998 - AluSc SINE Alu -5 304 1 255 256 45 150 chr2 176320856 176321078 -74366776 + MIR SINE MIR 71 262 0 228 145 113 48 chr2 176321294 176321356 -74366498 + MLT1J2 LTR MaLR 1 66 -384 573 304 97 13 chr2 176321609 176321836 -74366018 - MIR SINE MIR -2 260 15 666 286 52 14 chr2 176322301 176322511 -74365343 - MIR SINE MIR -8 254 37 2196 132 0 0 chr2 176323055 176323351 -74364503 - AluSg SINE Alu -14 296 1 275 206 27 0 chr2 176323415 176323488 -74364366 + (TA)n Simple_repeat Simple_repeat 1 75 0 1820 188 0 13 chr2 176325065 176325363 -74362491 + AluJb SINE Alu 1 294 -18 260 220 0 0 chr2 176325466 176325479 -74362375 + MER3 DNA MER1_type 35 47 -162 801 182 102 16 chr2 176325479 176325666 -74362188 - MER3 DNA MER1_type 0 209 7 1066 303 88 20 chr2 176325897 176326353 -74361501 + LTR16C LTR ERVL 5 491 0 234 315 225 0 chr2 176326436 176326525 -74361329 + L2 LINE L2 3148 3256 -16 397 312 55 11 chr2 176326534 176326720 -74361134 - MIR SINE MIR -51 211 16 462 229 25 114 chr2 176327280 176327481 -74360373 + MIR SINE MIR 32 214 -48 565 319 70 78 chr2 176328880 176329453 -74358401 + L2 LINE L2 2349 2916 -398 241 159 114 0 chr2 176329689 176329733 -74358121 + L2 LINE L2 3172 3220 -93 819 251 88 91 chr2 176329745 176329775 -74358079 + L2 LINE L2 2777 2806 -507 2729 99 0 3 chr2 176329775 176330140 -74357714 - THE1B LTR MaLR 0 364 1 819 251 88 91 chr2 176330140 176330498 -74357356 + L2 LINE L2 2806 3164 -149 2265 108 11 28 chr2 176330498 176330859 -74356995 - THE1A LTR MaLR 0 355 1 11495 95 13 2 chr2 176330859 176332422 -74355432 - THE1A-int LTR MaLR 0 1580 1 2380 110 11 8 chr2 176332422 176332776 -74355078 - THE1A LTR MaLR 0 355 1 819 251 88 91 chr2 176332776 176332862 -74354992 + L2 LINE L2 3161 3238 -75 1076 174 0 0 chr2 176334079 176334269 -74353585 + L1MA4 LINE L1 6108 6297 -3 30 27 0 0 chr2 176334931 176334968 -74352886 + AT_rich Low_complexity Low_complexity 1 37 0 311 269 124 41 chr2 176335081 176335136 -74352718 + MER103 DNA DNA 8 57 -109 1307 239 70 59 chr2 176335136 176335596 -74352258 + LTR40c LTR ERVL 1 465 0 311 269 124 41 chr2 176335596 176335685 -74352169 + MER103 DNA DNA 57 164 -2 1829 159 17 0 chr2 176336204 176336494 -74351360 - AluJo SINE Alu -6 306 12 2673 179 2 2 chr2 176337965 176338483 -74349371 - L1P LINE L1 -2702 3444 2927 * 3180 78 15 35 chr2 176338480 176338827 -74349027 + L1PA13 LINE L1 5304 5656 -507 2033 149 55 19 chr2 176338827 176339189 -74348665 + THE1C LTR MaLR 1 375 0 8041 148 73 55 chr2 176339192 176340741 -74347113 + THE1C-int LTR MaLR 4 1580 0 2095 154 47 19 chr2 176340743 176341106 -74346748 + THE1C LTR MaLR 3 375 0 3180 78 15 35 chr2 176341106 176341487 -74346367 + L1PA13 LINE L1 5659 6155 -8 1105 256 59 16 chr2 176341892 176342300 -74345554 + LTR16C LTR ERVL 6 484 -7 385 348 109 4 chr2 176342526 176342756 -74345098 + L2 LINE L2 2220 2473 -841 2869 6 0 3 chr2 176342997 176343309 -74344545 + AluY SINE Alu 1 311 0 257 307 13 67 chr2 176343349 176343499 -74344355 - MLT1L LTR MaLR -339 276 135 317 353 38 27 chr2 176343639 176343823 -74344031 + L2 LINE L2 2515 2700 -614 2384 78 0 0 chr2 176343887 176344181 -74343673 - AluY SINE Alu -17 294 1 284 381 113 24 chr2 176344182 176344518 -74343336 + L2 LINE L2 2907 3272 0 494 302 74 50 chr2 176344620 176344862 -74342992 + MIR SINE MIR 1 248 -14 185 396 0 0 chr2 176344876 176344924 -74342930 - L2 LINE L2 -75 3197 3150 1407 172 129 6 chr2 176344926 176345274 -74342580 - Charlie5 DNA MER1_type 0 2624 2234 365 197 28 0 chr2 176345296 176345367 -74342487 - Charlie5 DNA MER1_type -2515 97 25 438 298 63 87 chr2 176345458 176345952 -74341902 - L2 LINE L2 -181 3091 2680 3845 157 56 28 chr2 176345952 176346622 -74341232 + L1MB3 LINE L1 5449 6142 -41 1975 121 10 10 chr2 176346622 176346920 -74340934 + AluSc SINE Alu 1 298 -11 3845 157 56 28 chr2 176346920 176346962 -74340892 + L1MB3 LINE L1 6142 6181 -2 438 298 63 87 chr2 176346962 176347334 -74340520 - L2 LINE L2 -592 2680 2301 548 252 45 87 chr2 176347735 176347977 -74339877 + MLT1K LTR MaLR 316 547 -41 1160 179 277 40 chr2 176347992 176348045 -74339809 - Tigger6b DNA MER2_type -1 1596 1557 1903 128 48 0 chr2 176348045 176348334 -74339520 + AluSx SINE Alu 3 305 -7 1160 179 277 40 chr2 176348334 176348659 -74339195 - Tigger6b DNA MER2_type -40 1557 1128 4272 195 149 4 chr2 176349423 176350414 -74337440 - Tigger6b DNA MER2_type -461 1136 2 280 314 38 22 chr2 176350419 176350604 -74337250 - L2 LINE L2 -1131 2183 1996 2825 196 41 38 chr2 176350631 176351291 -74336563 - L1MB7 LINE L1 -21 6163 5502 23 33 0 0 chr2 176351610 176351640 -74336214 + AT_rich Low_complexity Low_complexity 1 30 0 387 347 21 0 chr2 176351667 176351811 -74336043 - ERVL LTR ERVL -2775 2989 2843 660 155 78 17 chr2 176351960 176352076 -74335778 + FLAM_A SINE Alu 5 127 -6 327 223 39 29 chr2 176352076 176352179 -74335675 - ERVL LTR ERVL -2947 2538 2435 1146 125 68 42 chr2 176352179 176352371 -74335483 + AluSq SINE Alu 39 235 -78 283 278 52 41 chr2 176352372 176352469 -74335385 - ERVL LTR ERVL -3221 2433 2336 887 301 69 13 chr2 176352476 176352932 -74334922 - MLT1J LTR MaLR -7 504 1 297 197 45 0 chr2 176352940 176353006 -74334848 - ERVL LTR ERVL -3394 2370 2302 819 336 63 16 chr2 176353103 176353481 -74334373 - ERVL LTR ERVL -3603 2161 1766 233 163 70 0 chr2 176354524 176354567 -74333287 - MER5A DNA MER1_type -1 188 143 21 36 0 0 chr2 176354848 176354876 -74332978 + AT_rich Low_complexity Low_complexity 1 28 0 443 233 50 33 chr2 176354998 176355118 -74332736 + L2 LINE L2 3182 3303 -10 2417 70 3 0 chr2 176355469 176355767 -74332087 + AluSp SINE Alu 1 299 -14 531 171 23 8 chr2 176358171 176358300 -74329554 + GA-rich Low_complexity Low_complexity 3 133 0 407 326 0 11 chr2 176358779 176358957 -74328897 + (CA)n Simple_repeat Simple_repeat 1 176 0 301 331 11 17 chr2 176359933 176360114 -74327740 + C-rich Low_complexity Low_complexity 1 180 0 23 33 0 0 chr2 176360138 176360168 -74327686 + GC_rich Low_complexity Low_complexity 1 30 0 299 259 0 43 chr2 176363082 176363198 -74324656 + G-rich Low_complexity Low_complexity 1 111 0 21 0 0 0 chr2 176363602 176363623 -74324231 + AT_rich Low_complexity Low_complexity 1 21 0 236 125 0 54 chr2 176365149 176365205 -74322649 + (GGA)n Simple_repeat Simple_repeat 2 54 0 21 0 0 0 chr2 176366262 176366283 -74321571 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 176366412 176366441 -74321413 + AT_rich Low_complexity Low_complexity 1 29 0 306 0 0 0 chr2 176366692 176366726 -74321128 + (A)n Simple_repeat Simple_repeat 1 34 0 22 0 0 0 chr2 176369182 176369204 -74318650 + AT_rich Low_complexity Low_complexity 1 22 0 23 78 0 0 chr2 176370432 176370483 -74317371 + AT_rich Low_complexity Low_complexity 1 51 0 436 303 76 54 chr2 176371712 176372029 -74315825 + L2 LINE L2 2974 3297 -16 1936 153 0 7 chr2 176372717 176373011 -74314843 + AluJb SINE Alu 1 292 -20 284 70 23 0 chr2 176373380 176373423 -74314431 + (TG)n Simple_repeat Simple_repeat 1 44 0 1843 170 28 70 chr2 176373494 176373924 -74313930 + MLT1C LTR MaLR 54 465 -2 268 241 115 35 chr2 176374771 176374858 -74312996 + MLT1I LTR MaLR 314 407 -2 260 310 158 11 chr2 176375066 176375250 -74312604 + MLT1K LTR MaLR 378 588 0 2308 233 106 6 chr2 176376369 176377018 -74310836 - MER21B LTR ERV1 -52 811 98 371 211 22 33 chr2 176377152 176377242 -74310612 - MER21B LTR ERV1 -774 89 1 3724 111 50 45 chr2 176377339 176377942 -74309912 - MER4B LTR ERV1 -4 606 1 394 261 15 84 chr2 176378162 176378365 -74309489 + MLT1H1-int LTR MaLR 998 1186 -185 747 264 99 82 chr2 176378517 176379043 -74308811 + MLT1H1 LTR MaLR 15 549 0 577 244 68 83 chr2 176379069 176379124 -74308730 + MLT1L LTR MaLR 11 65 -550 253 250 44 0 chr2 176379124 176379192 -74308662 + LTR67 LTR ERVL 80 150 -407 577 244 68 83 chr2 176379192 176379374 -74308480 + MLT1L LTR MaLR 65 380 -235 8105 21 5 5 chr2 176379457 176380408 -74307446 - L1PA3 LINE L1 0 6155 5205 5865 26 0 1 chr2 176380408 176381094 -74306760 + L1PA3 LINE L1 4530 5214 -932 24 0 0 0 chr2 176381343 176381367 -74306487 + AT_rich Low_complexity Low_complexity 1 24 0 741 312 109 33 chr2 176382205 176382726 -74305128 - L2 LINE L2 -2 3311 2751 330 206 0 0 chr2 176383374 176383447 -74304407 + (TA)n Simple_repeat Simple_repeat 2 74 0 510 237 61 0 chr2 176383537 176383651 -74304203 - L2 LINE L2 -1 3312 3192 1950 196 93 52 chr2 176383792 176384053 -74303801 + MLT1D LTR MaLR 1 250 -255 200 35 35 0 chr2 176384053 176384082 -74303772 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1950 196 93 52 chr2 176384082 176384103 -74303751 + MLT1D LTR MaLR 250 269 -236 1805 161 71 28 chr2 176384103 176384425 -74303429 + MER1B DNA MER1_type 2 337 0 1950 196 93 52 chr2 176384425 176384626 -74303228 + MLT1D LTR MaLR 269 505 0 1410 276 131 41 chr2 176384652 176385538 -74302316 - L2 LINE L2 -252 3061 2067 830 234 11 0 chr2 176386369 176386544 -74301310 - MER5B DNA MER1_type 0 178 2 341 270 182 0 chr2 176386985 176387133 -74300721 + MER5A DNA MER1_type 9 183 -6 1102 133 17 6 chr2 176389491 176389672 -74298182 + AluSq SINE Alu 130 312 -1 288 169 39 39 chr2 176390301 176390378 -74297476 - Charlie4a DNA MER1_type -163 345 269 8947 179 88 22 chr2 176390397 176391372 -74296482 - L1MA6 LINE L1 -7 6995 6086 2366 89 0 0 chr2 176391372 176391665 -74296189 + AluSc SINE Alu 1 293 -16 8947 179 88 22 chr2 176391665 176393656 -74294198 - L1MA6 LINE L1 -916 6086 3776 2366 93 3 3 chr2 176393656 176393968 -74293886 - AluSp SINE Alu -1 312 1 8947 179 88 22 chr2 176393968 176394260 -74293594 - L1MA6 LINE L1 -3226 3776 3505 693 92 0 0 chr2 176394269 176394367 -74293487 + (TTCC)n Simple_repeat Simple_repeat 2 99 0 991 168 0 174 chr2 176394368 176394696 -74293158 - AluSc SINE Alu -38 271 1 4465 220 86 35 chr2 176394696 176397082 -74290772 - L1MA6 LINE L1 -3325 3523 1320 246 340 74 55 chr2 176397309 176397798 -74290056 + L2 LINE L2 1564 2061 -1253 305 292 74 88 chr2 176398219 176398582 -74289272 + L2 LINE L2 2872 3229 -84 798 257 183 57 chr2 176398582 176399041 -74288813 - LTR33 LTR ERVL 0 521 5 291 129 243 0 chr2 176399045 176399115 -74288739 + L2 LINE L2 3227 3313 0 439 286 91 7 chr2 176400839 176400993 -74286861 + MER112 DNA MER1_type 87 253 -7 334 333 19 0 chr2 176401123 176401231 -74286623 + MIR3 SINE MIR 88 197 -11 1030 205 19 0 chr2 176402538 176402743 -74285111 + MER3 DNA MER1_type 1 209 0 863 129 0 0 chr2 176402955 176403071 -74284783 + FLAM_C SINE Alu 1 116 -27 615 117 0 0 chr2 176403081 176403175 -74284679 + (TA)n Simple_repeat Simple_repeat 2 95 0 526 257 168 20 chr2 176404545 176404770 -74283084 - MIR SINE MIR -3 259 4 988 236 106 19 chr2 176405089 176405504 -74282350 - L1MC5 LINE L1 -88 7873 7423 275 301 118 35 chr2 176405505 176405734 -74282120 - LTR16B LTR ERVL -107 357 110 1717 292 104 54 chr2 176405876 176407387 -74280467 - L1MC4a LINE L1 -817 6991 5405 272 314 59 65 chr2 176407643 176407812 -74280042 - L2 LINE L2 -213 3059 2892 22 0 0 0 chr2 176409097 176409119 -74278735 + AT_rich Low_complexity Low_complexity 1 22 0 1671 202 51 16 chr2 176413668 176414039 -74273815 - MLT1B LTR MaLR -6 384 1 1405 196 0 48 chr2 176414097 176414408 -74273446 + AluJb SINE Alu 1 296 -16 403 229 68 88 chr2 176418315 176418507 -74269347 + MIR SINE MIR 32 219 -43 399 240 83 0 chr2 176418587 176418683 -74269171 + L2 LINE L2 3210 3313 0 249 292 146 39 chr2 176418684 176418814 -74269040 - MIR3 SINE MIR -47 161 18 302 293 85 0 chr2 176418972 176419054 -74268800 + MIR SINE MIR 126 214 -48 2433 278 109 19 chr2 176419196 176419898 -74267956 + L2 LINE L2 1935 2743 -571 1451 194 20 30 chr2 176419898 176420197 -74267657 - AluJo SINE Alu -16 296 1 2433 278 109 19 chr2 176420197 176420428 -74267426 + L2 LINE L2 2743 2952 -362 994 204 85 63 chr2 176420428 176420747 -74267107 - MER46C DNA MER2_type -12 326 1 186 222 111 0 chr2 176424423 176424468 -74263386 + L2 LINE L2 3263 3312 -1 219 233 14 68 chr2 176424858 176424931 -74262923 - L2 LINE L2 -4 3309 3241 824 163 91 69 chr2 176425576 176425735 -74262119 - Charlie1a DNA MER1_type -1306 1455 1286 2172 100 20 3 chr2 176425735 176426036 -74261818 + AluSx SINE Alu 5 310 -2 824 163 91 69 chr2 176426036 176426152 -74261702 - Charlie1a DNA MER1_type -1475 1286 1174 1048 207 52 0 chr2 176426178 176426391 -74261463 - L1PB4 LINE L1 -9 6147 5924 4377 211 52 10 chr2 176426392 176427508 -74260346 - Charlie1a DNA MER1_type -242 1213 51 2467 82 3 0 chr2 176427931 176428236 -74259618 + AluY SINE Alu 1 306 -5 1612 149 43 28 chr2 176431191 176431514 -74256340 + L1MA9 LINE L1 5911 6238 -74 225 192 0 0 chr2 176431636 176431688 -74256166 + L1MA9 LINE L1 6261 6312 0 21 57 0 0 chr2 176431807 176431842 -74256012 + AT_rich Low_complexity Low_complexity 1 35 0 1114 221 72 8 chr2 176431855 176432176 -74255678 + L1ME2 LINE L1 5826 6164 0 554 303 106 0 chr2 176432261 176432449 -74255405 + MIR SINE MIR 39 246 -16 1608 152 0 82 chr2 176432744 176433060 -74254794 - AluJo SINE Alu -16 296 7 464 211 84 84 chr2 176433071 176433194 -74254660 - L1ME LINE L1 -303 5818 5693 2191 124 0 3 chr2 176433194 176433501 -74254353 - AluSg SINE Alu -4 306 1 464 211 84 84 chr2 176433501 176433604 -74254250 - L1ME LINE L1 -427 5694 5592 625 238 99 34 chr2 176433799 176434287 -74253567 - L1MC4a LINE L1 -509 5612 5299 1946 115 14 35 chr2 176434717 176435029 -74252825 - AluSx SINE Alu 0 306 1 334 269 147 46 chr2 176435081 176435173 -74252681 - L1MC4a LINE L1 -1486 4660 4579 1313 43 0 0 chr2 176435173 176435336 -74252518 + L1PA2 LINE L1 5992 6154 -1 334 269 147 46 chr2 176435336 176435827 -74252027 - L1MC4a LINE L1 -1567 4579 4015 252 281 58 7 chr2 176436128 176436267 -74251587 + L1 LINE L1 5215 5360 -786 934 220 0 6 chr2 176436274 176436447 -74251407 + FAM SINE Alu 1 172 -3 249 196 36 0 chr2 176436884 176436940 -74250914 + L1MC3 LINE L1 6716 6773 -1012 247 238 16 16 chr2 176437007 176437070 -74250784 + L1MC4 LINE L1 6941 7003 -1039 541 217 228 0 chr2 176437173 176437353 -74250501 + Charlie1 DNA MER1_type 7 227 -2534 607 199 29 7 chr2 176437358 176437494 -74250360 + Charlie1 DNA MER1_type 2623 2761 0 348 224 16 22 chr2 176438329 176438642 -74249212 + CT-rich Low_complexity Low_complexity 1 311 0 2643 236 88 19 chr2 176438826 176439653 -74248201 - L1MEc LINE L1 -5479 917 34 1331 109 25 0 chr2 176440325 176440526 -74247328 - L1PA13 LINE L1 0 6163 5958 1562 198 67 6 chr2 176440894 176441253 -74246601 - L1 LINE L1 -2144 4002 3622 183 42 0 0 chr2 176442553 176442577 -74245277 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2123 118 0 7 chr2 176443065 176443369 -74244485 - AluSx SINE Alu -10 302 1 5795 219 26 26 chr2 176443465 176445083 -74242771 - L1PBb LINE L1 -3169 3034 1297 2004 135 0 3 chr2 176445083 176445393 -74242461 - AluSx SINE Alu 0 309 1 5795 219 26 26 chr2 176445393 176445983 -74241871 - L1PBb LINE L1 -4906 1297 709 307 312 0 11 chr2 176445987 176446080 -74241774 - L1PA15-16 LINE L1 -5285 1564 1473 343 231 91 8 chr2 176447554 176447675 -74240179 + L1MEd LINE L1 741 871 -5248 351 256 25 33 chr2 176447758 176447879 -74239975 - MER5B DNA MER1_type -55 123 4 291 337 12 61 chr2 176448910 176449073 -74238781 - MIR SINE MIR -105 157 3 214 293 0 0 chr2 176450424 176450482 -74237372 + MIR SINE MIR 205 262 0 440 335 32 41 chr2 176450548 176450766 -74237088 - MIR SINE MIR -27 235 20 267 261 209 8 chr2 176451454 176451588 -74236266 + MIR SINE MIR 48 208 -54 216 97 0 0 chr2 176451758 176451789 -74236065 + (CAT)n Simple_repeat Simple_repeat 3 33 0 518 222 254 16 chr2 176451799 176451984 -74235870 - MIR SINE MIR -32 230 2 3651 271 109 23 chr2 176452603 176454104 -74233750 - L1MC4a LINE L1 -926 6882 5254 1952 147 0 7 chr2 176454209 176454495 -74233359 + AluSx SINE Alu 3 286 -26 1386 172 47 36 chr2 176454525 176454804 -74233050 + AluJb SINE Alu 1 282 -30 180 0 0 0 chr2 176454807 176454827 -74233027 + (CATA)n Simple_repeat Simple_repeat 2 21 0 425 273 78 11 chr2 176454828 176455082 -74232772 - L1MC4a LINE L1 -991 5155 4885 265 228 0 87 chr2 176455094 176455186 -74232668 + L1MA8 LINE L1 4991 5074 -1072 521 296 57 23 chr2 176455210 176455474 -74232380 + L1MC4a LINE L1 6246 6518 -1290 5510 153 39 3 chr2 176455491 176456661 -74231193 + L1MA8 LINE L1 5075 6286 -5 821 288 95 74 chr2 176459334 176460075 -74227779 - L2 LINE L2 -2 3311 2519 1631 221 0 0 chr2 176460118 176460417 -74227437 - AluJo SINE Alu -13 299 1 287 303 108 22 chr2 176460461 176460785 -74227069 - L1MC4 LINE L1 -1 8041 7690 354 300 257 0 chr2 176460930 176461070 -74226784 - MER5A DNA MER1_type -13 176 1 416 267 59 59 chr2 176461082 176461637 -74226217 - L1MC5 LINE L1 -398 7410 7009 555 177 7 75 chr2 176461641 176461788 -74226066 - L2 LINE L2 -859 2455 2319 2086 105 3 42 chr2 176461803 176462109 -74225745 + AluSx SINE Alu 1 294 -18 180 0 0 0 chr2 176462110 176462130 -74225724 + (TA)n Simple_repeat Simple_repeat 2 21 0 395 340 76 16 chr2 176462245 176462430 -74225424 + HERVL LTR ERVL 3531 3726 -1928 1692 291 88 16 chr2 176462515 176463186 -74224668 + HERVL LTR ERVL 3882 4600 -1164 645 340 48 24 chr2 176463251 176463627 -74224227 + HERVL LTR ERVL 4763 5147 -617 434 331 59 31 chr2 176463671 176463958 -74223896 + L1MC4a LINE L1 3423 3717 -2429 237 299 57 38 chr2 176464069 176464226 -74223628 + L1P LINE L1 4082 4241 -1905 378 306 100 27 chr2 176464442 176465030 -74222824 + L1MC4a LINE L1 4504 5141 -1005 514 253 77 43 chr2 176465180 176465413 -74222441 + L1MC4a LINE L1 5316 5556 -2252 577 308 116 13 chr2 176465424 176465648 -74222206 - MIR SINE MIR -10 252 6 435 316 30 26 chr2 176465764 176465998 -74221856 + L1MC4a LINE L1 5695 5929 -1879 1658 176 8 0 chr2 176466059 176466321 -74221533 + AluJb SINE Alu 11 274 -38 194 105 26 0 chr2 176466329 176466367 -74221487 + CT-rich Low_complexity Low_complexity 2 40 0 318 250 0 0 chr2 176466395 176466483 -74221371 + (TA)n Simple_repeat Simple_repeat 2 89 0 1498 285 95 23 chr2 176466918 176467486 -74220368 + L2 LINE L2 149 757 -2557 728 209 38 13 chr2 176467504 176467662 -74220192 + MER5A DNA MER1_type 4 165 -24 193 267 67 0 chr2 176467711 176467771 -74220083 + L2 LINE L2 938 1001 -2313 977 291 94 3 chr2 176467771 176468145 -74219709 + L2 LINE L2 2426 2833 -481 263 170 38 0 chr2 176468220 176468273 -74219581 - L1MC4 LINE L1 -377 7665 7611 658 238 41 50 chr2 176468280 176468599 -74219255 - L1MC4 LINE L1 -728 7314 6999 192 320 0 0 chr2 176468730 176468780 -74219074 - L2 LINE L2 -256 3057 3008 33 43 0 0 chr2 176471044 176471091 -74216763 + AT_rich Low_complexity Low_complexity 1 47 0 338 301 73 7 chr2 176472842 176472978 -74214876 - MLT1L LTR MaLR -470 145 1 22 35 0 0 chr2 176473875 176473904 -74213950 + AT_rich Low_complexity Low_complexity 1 29 0 207 160 0 80 chr2 176474490 176474540 -74213314 - MER91A DNA MER1_type -20 170 125 201 313 47 31 chr2 176474679 176474743 -74213111 - MER91A DNA MER1_type -113 83 19 448 404 37 5 chr2 176474757 176474975 -74212879 - L3 LINE CR1 -214 1363 1139 255 301 147 19 chr2 176475478 176475634 -74212220 - L2 LINE L2 -526 2788 2613 1091 197 0 52 chr2 176475634 176475756 -74212098 - MER46A DNA MER2_type -2495 236 132 1695 20 0 5 chr2 176475756 176475959 -74211895 + L1PA2 LINE L1 5950 6151 -4 1091 197 0 52 chr2 176475959 176476085 -74211769 - MER46A DNA MER2_type -2599 132 1 236 352 76 21 chr2 176476138 176476374 -74211480 - L2 LINE L2 -749 2565 2317 183 323 0 0 chr2 176476429 176476491 -74211363 - L3b LINE CR1 -198 1385 1324 210 241 50 99 chr2 176476847 176476988 -74210866 + L2 LINE L2 3106 3239 -74 21 0 0 0 chr2 176479556 176479577 -74208277 + AT_rich Low_complexity Low_complexity 1 21 0 1991 125 3 87 chr2 176480365 176480732 -74207122 + MER1B DNA MER1_type 1 336 -1 244 340 92 14 chr2 176480898 176481039 -74206815 + L3 LINE CR1 1370 1521 -56 2045 138 41 25 chr2 176482162 176482525 -74205329 - MER4D LTR ERV1 0 903 535 1991 138 0 0 chr2 176482541 176482840 -74205014 + AluSx SINE Alu 9 307 0 3527 128 7 31 chr2 176482853 176483221 -74204633 - MER4D LTR ERV1 -346 557 206 1987 128 11 4 chr2 176483221 176483502 -74204352 - AluSg SINE Alu -14 296 14 3527 128 7 31 chr2 176483502 176483704 -74204150 - MER4D LTR ERV1 -697 206 1 775 325 12 24 chr2 176483895 176484144 -74203710 + MIR SINE MIR 7 252 -10 442 281 82 15 chr2 176484922 176485118 -74202736 + Charlie8 DNA MER1_type 37 245 -2172 479 249 141 54 chr2 176486151 176486392 -74201462 + MIR SINE MIR 1 262 0 266 330 54 18 chr2 176486583 176486695 -74201159 + L2 LINE L2 3198 3313 0 274 320 132 48 chr2 176486697 176487107 -74200747 - L2 LINE L2 -221 3051 2600 7223 42 5 1 chr2 176487149 176488392 -74199462 + L1PA5 LINE L1 4897 6142 -12 184 308 128 58 chr2 176488482 176488595 -74199259 + MIR SINE MIR 21 149 -113 2209 104 10 0 chr2 176488595 176488894 -74198960 + AluSx SINE Alu 1 302 -10 184 308 128 58 chr2 176488894 176488936 -74198918 + MIR SINE MIR 149 187 -75 198 0 0 0 chr2 176490460 176490482 -74197372 + (T)n Simple_repeat Simple_repeat 1 22 0 554 258 26 32 chr2 176491486 176491641 -74196213 - MER5A DNA MER1_type -5 184 31 211 249 133 0 chr2 176491678 176491768 -74196086 - MER5A DNA MER1_type -19 159 46 2362 148 73 27 chr2 176491827 176492022 -74195832 - L1MA8 LINE L1 -4 6287 6102 2405 108 13 26 chr2 176492022 176492402 -74195452 - THE1C LTR MaLR 0 375 1 2362 148 73 27 chr2 176492402 176492687 -74195167 - L1MA8 LINE L1 -189 6102 5785 1490 145 67 0 chr2 176492690 176492945 -74194909 + MER46B DNA MER2_type 1 147 -89 1931 73 52 3 chr2 176492945 176493307 -74194547 - L1PA8A LINE L1 -588 5543 5166 1677 150 27 7 chr2 176493306 176493606 -74194248 - L1 LINE L1 -1764 4382 4077 * 28 0 0 0 chr2 176493808 176493836 -74194018 + AT_rich Low_complexity Low_complexity 1 28 0 283 216 0 23 chr2 176496285 176496373 -74191481 + CT-rich Low_complexity Low_complexity 3 88 0 271 321 80 62 chr2 176496420 176496532 -74191322 - L2 LINE L2 -25 3247 3134 2443 111 43 6 chr2 176497426 176497777 -74190077 - THE1B LTR MaLR 0 364 1 232 283 0 0 chr2 176498727 176498780 -74189074 + MIR SINE MIR 180 232 -30 396 290 62 45 chr2 176498905 176499081 -74188773 + MIR3 SINE MIR 10 188 -20 2227 106 0 3 chr2 176500633 176500944 -74186910 - AluSg SINE Alu 0 310 1 1587 186 29 56 chr2 176503216 176503592 -74184262 - MLT1B LTR MaLR -2 388 23 252 293 264 0 chr2 176503620 176503794 -74184060 + L2 LINE L2 2875 3094 -178 757 233 23 23 chr2 176504025 176504281 -74183573 - MLT1B LTR MaLR -175 292 1 1471 126 96 22 chr2 176506536 176506807 -74181047 - MER1B DNA MER1_type -2 337 47 22 80 0 0 chr2 176507853 176507903 -74179951 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 176508438 176508460 -74179394 + AT_rich Low_complexity Low_complexity 1 22 0 818 264 24 5 chr2 176511002 176511214 -74176640 + MER20 DNA MER1_type 1 216 -3 215 304 80 56 chr2 176511229 176511354 -74176500 - MIR3 SINE MIR -73 135 8 24 32 0 0 chr2 176511564 176511595 -74176259 + AT_rich Low_complexity Low_complexity 1 31 0 5966 84 59 3 chr2 176511671 176512554 -74175300 + L1P LINE L1 3914 4845 -1301 651 80 0 0 chr2 176512566 176512654 -74175200 - AluJ/FLAM SINE Alu -224 88 1 24 0 0 0 chr2 176512751 176512775 -74175079 + AT_rich Low_complexity Low_complexity 1 24 0 33 25 0 0 chr2 176513035 176513075 -74174779 + AT_rich Low_complexity Low_complexity 1 40 0 2257 70 42 0 chr2 176513515 176513800 -74174054 - AluSg SINE Alu -13 297 1 236 330 176 11 chr2 176516425 176516516 -74171338 - MER5A DNA MER1_type -83 106 1 2190 96 13 13 chr2 176517511 176517823 -74170031 + AluSx SINE Alu 1 312 0 331 225 32 10 chr2 176521397 176521498 -74166356 + L1MC4 LINE L1 1995 6988 -1334 181 303 66 13 chr2 176523113 176523189 -74164665 + MIR SINE MIR 51 130 -78 242 298 149 39 chr2 176524065 176524273 -74163581 + L2 LINE L2 2603 2833 -481 1122 259 82 21 chr2 176525183 176525611 -74162243 - L1ME3A LINE L1 0 6170 5717 27 0 0 0 chr2 176525815 176525842 -74162012 + AT_rich Low_complexity Low_complexity 1 27 0 689 229 167 5 chr2 176525882 176526074 -74161780 + MER58A DNA MER1_type 2 224 0 308 221 40 107 chr2 176527818 176527967 -74159887 + MLT1L LTR MaLR 2 140 -475 442 256 54 8 chr2 176528254 176528383 -74159471 + MLT1L LTR MaLR 481 615 0 552 276 84 29 chr2 176529248 176529487 -74158367 - MIR SINE MIR 0 262 11 320 260 90 34 chr2 176529489 176529666 -74158188 - MER5A DNA MER1_type 0 189 3 370 298 174 26 chr2 176530615 176530880 -74156974 - L2 LINE L2 -1 3271 2968 194 441 34 0 chr2 176531090 176531269 -74156585 - L2 LINE L2 -698 2616 2432 200 324 175 28 chr2 176531306 176531661 -74156193 - L2 LINE L2 -976 2338 1932 232 261 0 0 chr2 176532543 176532589 -74155265 - MIR SINE MIR -6 256 211 21 0 0 0 chr2 176532994 176533015 -74154839 + AT_rich Low_complexity Low_complexity 1 21 0 205 218 73 18 chr2 176534047 176534102 -74153752 + L3 LINE CR1 1512 1569 -8 1624 171 36 13 chr2 176535457 176535786 -74152068 - AluJo SINE Alu 0 336 1 207 0 0 0 chr2 176535921 176535944 -74151910 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1887 151 7 0 chr2 176535948 176536233 -74151621 - AluSx SINE Alu -25 287 1 2013 170 9 0 chr2 176536769 176537110 -74150744 - MER2 DNA MER2_type -1 344 1 581 274 14 62 chr2 176538110 176538318 -74149536 + MIR SINE MIR 11 208 -54 242 331 74 0 chr2 176539887 176540008 -74147846 - L2 LINE L2 0 3313 3184 207 0 0 0 chr2 176541058 176541081 -74146773 + (A)n Simple_repeat Simple_repeat 1 23 0 4654 276 149 9 chr2 176541552 176543390 -74144464 + L2 LINE L2 882 2976 -338 621 222 150 18 chr2 176543395 176543562 -74144292 + MER5A DNA MER1_type 1 189 0 902 273 60 42 chr2 176543562 176543896 -74143958 + L2 LINE L2 2973 3312 -1 24 32 0 0 chr2 176546290 176546321 -74141533 + AT_rich Low_complexity Low_complexity 1 31 0 212 179 0 0 chr2 176546756 176546795 -74141059 + A-rich Low_complexity Low_complexity 1 39 0 748 173 69 52 chr2 176548185 176548358 -74139496 - AluJb SINE Alu -1 311 136 648 223 0 8 chr2 176550200 176550321 -74137533 - FLAM_A SINE Alu -13 120 1 636 270 97 18 chr2 176551546 176551772 -74136082 + MIR SINE MIR 2 245 -17 480 351 159 8 chr2 176552466 176552819 -74135035 - L2 LINE L2 0 3272 2867 180 176 0 0 chr2 176552865 176552899 -74134955 + GA-rich Low_complexity Low_complexity 3 36 0 2676 29 3 0 chr2 176553082 176553390 -74134464 - AluY SINE Alu -1 310 2 760 265 63 0 chr2 176553792 176554015 -74133839 - MIR SINE MIR -6 256 20 444 19 0 0 chr2 176554109 176554162 -74133692 + (CA)n Simple_repeat Simple_repeat 1 53 0 819 169 5 60 chr2 176554162 176554346 -74133508 + L1PB4 LINE L1 5797 5970 -186 1913 175 73 32 chr2 176554365 176554806 -74133048 + LTR2B LTR ERV1 32 490 0 712 236 17 6 chr2 176554811 176554985 -74132869 + L1PB4 LINE L1 5972 6147 -9 2298 98 3 3 chr2 176555789 176556096 -74131758 + AluY SINE Alu 1 307 -4 355 260 68 51 chr2 176558262 176558439 -74129415 + MER104 DNA MER2_type 1 180 0 283 252 43 115 chr2 176559035 176559174 -74128680 - L2 LINE L2 -4 3268 3140 331 275 94 23 chr2 176560390 176560561 -74127293 - L2 LINE L2 -5 3308 3126 22 0 0 0 chr2 176561607 176561629 -74126225 + AT_rich Low_complexity Low_complexity 1 22 0 270 254 0 14 chr2 176563988 176564059 -74123795 + MIR SINE MIR 179 248 -14 4733 166 61 26 chr2 176566199 176567514 -74120340 - L1MA9 LINE L1 -40 6272 4908 2740 134 2 12 chr2 176567523 176567955 -74119899 - L1PA15 LINE L1 -21 6144 5717 643 216 15 8 chr2 176570825 176570959 -74116895 - AluJo SINE Alu -175 137 3 2042 137 27 3 chr2 176571183 176571512 -74116342 - MER1B DNA MER1_type 0 337 1 263 312 80 40 chr2 176571595 176571720 -74116134 + MER117 DNA MER1_type 30 159 -38 224 299 0 26 chr2 176571789 176571866 -74115988 + GA-rich Low_complexity Low_complexity 1 75 0 927 189 0 18 chr2 176573749 176573918 -74113936 - FRAM SINE Alu 0 166 1 484 337 0 23 chr2 176574056 176574228 -74113626 - MER5B DNA MER1_type -5 173 6 776 122 99 0 chr2 176574248 176574379 -74113475 + MER30 DNA MER1_type 1 144 -86 1009 162 27 5 chr2 176574381 176574566 -74113288 - L1M2 LINE L1 -611 5680 5492 5811 37 1 1 chr2 176574569 176575265 -74112589 - L1PA5 LINE L1 0 6154 5459 346 122 0 0 chr2 176575265 176575314 -74112540 + MER30 DNA MER1_type 151 199 -31 299 253 61 40 chr2 176576111 176576210 -74111644 + L2 LINE L2 3196 3296 -17 199 226 104 94 chr2 176576493 176576599 -74111255 + MIR SINE MIR 156 262 0 322 378 70 0 chr2 176576708 176576851 -74111003 - MIR SINE MIR -57 205 53 223 121 0 0 chr2 176577725 176577758 -74110096 + L2 LINE L2 3263 3295 -18 750 209 52 47 chr2 176578642 176578853 -74109001 - MIR SINE MIR -2 260 49 217 242 0 16 chr2 176579213 176579275 -74108579 + GA-rich Low_complexity Low_complexity 1 61 0 838 337 83 43 chr2 176580340 176580572 -74107282 + L2 LINE L2 1870 2091 -1223 459 259 84 18 chr2 176580572 176580738 -74107116 - MER5B DNA MER1_type 0 178 2 838 337 83 43 chr2 176580738 176581371 -74106483 + L2 LINE L2 2091 2770 -544 275 358 22 56 chr2 176581451 176581630 -74106224 + L2 LINE L2 2896 3068 -204 1010 136 98 76 chr2 176582536 176582852 -74105002 - MER33 DNA MER1_type 0 324 2 198 250 54 0 chr2 176583925 176583981 -74103873 - MIR SINE MIR 0 262 204 333 0 0 0 chr2 176584043 176584080 -74103774 + (CA)n Simple_repeat Simple_repeat 1 37 0 276 314 54 54 chr2 176585376 176585561 -74102293 + MIR SINE MIR 24 208 -54 200 375 29 19 chr2 176589867 176589971 -74097883 - L2 LINE L2 -6 3307 3203 445 317 77 5 chr2 176590042 176590263 -74097591 + L2 LINE L2 1986 2222 -1092 5935 140 16 129 chr2 176590269 176592686 -74095168 + L1MA4 LINE L1 3864 6020 -280 351 169 45 0 chr2 176592695 176592784 -74095070 + L1MB3 LINE L1 6091 6183 0 16738 39 7 0 chr2 176593103 176595907 -74091947 + L1PA5 LINE L1 3343 6152 -2 1343 331 72 36 chr2 176596016 176597050 -74090804 + L2 LINE L2 2227 3306 -7 21 0 0 0 chr2 176597870 176597891 -74089963 + AT_rich Low_complexity Low_complexity 1 21 0 280 130 0 0 chr2 176597970 176598016 -74089838 - AluSx SINE Alu -2 298 253 1131 156 80 25 chr2 176598016 176598215 -74089639 - AluSx SINE Alu -102 210 1 201 295 26 26 chr2 176598666 176598744 -74089110 + MIR SINE MIR 172 249 -13 273 250 111 0 chr2 176598933 176599005 -74088849 - L2 LINE L2 0 3272 3193 207 139 0 0 chr2 176600191 176600227 -74087627 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 23 0 0 0 chr2 176600784 176600807 -74087047 + AT_rich Low_complexity Low_complexity 1 23 0 1641 164 61 0 chr2 176601690 176601970 -74085884 + AluJb SINE Alu 5 301 -11 254 297 97 28 chr2 176603820 176603965 -74083889 - L2 LINE L2 0 3313 3159 436 306 149 40 chr2 176604408 176604912 -74082942 - L2 LINE L2 -826 2488 1930 671 209 170 0 chr2 176606231 176606384 -74081470 - MER5A DNA MER1_type 0 189 11 180 111 0 0 chr2 176606851 176606878 -74080976 + (GGA)n Simple_repeat Simple_repeat 1 27 0 1868 191 14 3 chr2 176607667 176608038 -74079816 - L1PB4 LINE L1 0 6156 5782 241 80 20 20 chr2 176608095 176608145 -74079709 + (TA)n Simple_repeat Simple_repeat 2 51 0 24 67 0 0 chr2 176608150 176608195 -74079659 + AT_rich Low_complexity Low_complexity 1 45 0 6473 190 18 39 chr2 176608195 176610216 -74077638 - L1PB4 LINE L1 -365 5791 3818 750 319 190 21 chr2 176610359 176610610 -74077244 + L2 LINE L2 2558 2765 -548 2514 92 0 67 chr2 176610610 176611000 -74076854 - THE1B LTR MaLR 0 364 1 750 319 190 21 chr2 176611000 176611387 -74076467 + L2 LINE L2 2765 3312 -1 5987 83 9 27 chr2 176611579 176612651 -74075203 + L1PB2 LINE L1 5095 6149 -2 436 291 77 90 chr2 176613586 176613796 -74074058 + MLT1J LTR MaLR 1 212 -299 3877 105 69 2 chr2 176613796 176614389 -74073465 + MER41B LTR ERV1 1 633 -2 436 291 77 90 chr2 176614389 176614621 -74073233 + MLT1J LTR MaLR 212 437 -74 429 196 42 142 chr2 176615588 176615828 -74072026 - MER112 DNA MER1_type -12 248 33 2763 10 0 0 chr2 176616949 176617249 -74070605 - AluY SINE Alu -11 300 1 3717 170 52 6 chr2 176618476 176619166 -74068688 - MER50 LTR ERV1 -12 722 1 1037 295 120 5 chr2 176619166 176619554 -74068300 - LTR33 LTR ERVL -69 452 20 409 271 36 57 chr2 176620151 176620343 -74067511 - MIR SINE MIR -43 219 32 477 214 21 21 chr2 176621748 176621893 -74065961 - L1MB8 LINE L1 -1 6177 6033 1029 242 48 29 chr2 176622498 176622890 -74064964 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr2 176624482 176624504 -74063350 + AT_rich Low_complexity Low_complexity 1 22 0 273 353 134 32 chr2 176624987 176625330 -74062524 + L2 LINE L2 2396 2773 -541 2448 88 0 0 chr2 176625475 176625782 -74062072 + AluY SINE Alu 1 307 -4 512 354 113 16 chr2 176625794 176626405 -74061449 - L2 LINE L2 -48 3224 2554 346 313 103 41 chr2 176626632 176626827 -74061027 - LTR33 LTR ERVL -314 207 1 709 336 131 19 chr2 176626854 176627336 -74060518 + L2 LINE L2 1933 2468 -846 26045 133 10 24 chr2 176627366 176633840 -74054014 - L1PA8A LINE L1 0 6446 2 668 365 163 18 chr2 176633920 176634452 -74053402 - L2 LINE L2 -1403 1911 1457 2372 83 0 3 chr2 176634452 176634764 -74053090 + AluY SINE Alu 1 311 0 668 365 163 18 chr2 176634764 176635246 -74052608 - L2 LINE L2 -1857 1457 750 296 286 19 0 chr2 176636095 176636200 -74051654 + (TA)n Simple_repeat Simple_repeat 2 108 0 221 204 0 41 chr2 176636460 176636509 -74051345 - L2 LINE L2 -3 3310 3264 2849 79 16 3 chr2 176636515 176636894 -74050960 + MLT2A2 LTR ERVL 1 384 -69 679 256 60 0 chr2 176637434 176637633 -74050221 + MIR SINE MIR 8 218 -44 198 191 0 0 chr2 176638080 176638127 -74049727 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 963 239 82 26 chr2 176640963 176641269 -74046585 - MER5C DNA MER1_type 0 324 2 261 264 11 46 chr2 176641614 176641701 -74046153 - L2 LINE L2 -1 3271 3188 2302 100 0 10 chr2 176642739 176643048 -74044806 - AluSx SINE Alu -6 306 1 21 36 0 0 chr2 176643119 176643147 -74044707 + AT_rich Low_complexity Low_complexity 1 28 0 1783 165 27 0 chr2 176643634 176643807 -74044047 - AluSx SINE Alu -7 305 119 402 21 0 0 chr2 176643807 176643854 -74044000 + (TG)n Simple_repeat Simple_repeat 2 48 0 1783 165 27 0 chr2 176643854 176643977 -74043877 - AluSx SINE Alu -193 119 1 31 30 0 0 chr2 176644923 176644956 -74042898 + AT_rich Low_complexity Low_complexity 1 33 0 1646 217 135 15 chr2 176645100 176645580 -74042274 + MLT1F LTR MaLR 3 540 -2 225 0 0 0 chr2 176645959 176645984 -74041870 + (T)n Simple_repeat Simple_repeat 1 25 0 246 292 17 67 chr2 176647406 176647526 -74040328 + L2 LINE L2 3160 3273 -40 398 314 25 16 chr2 176648521 176648642 -74039212 - MIR SINE MIR -121 141 20 845 288 59 55 chr2 176649407 176649879 -74037975 - LTR33 LTR ERVL 0 521 48 21 36 0 0 chr2 176650051 176650079 -74037775 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 176650294 176650317 -74037537 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr2 176650348 176650369 -74037485 + (T)n Simple_repeat Simple_repeat 1 21 0 2341 79 0 3 chr2 176650475 176650780 -74037074 - AluY SINE Alu -7 304 1 434 260 204 13 chr2 176650864 176651099 -74036755 - L2 LINE L2 -866 2448 2169 30 45 0 0 chr2 176651435 176651479 -74036375 + AT_rich Low_complexity Low_complexity 1 44 0 831 253 60 30 chr2 176651945 176652210 -74035644 + MLT1G1 LTR MaLR 5 277 -318 192 257 57 57 chr2 176652534 176652604 -74035250 - MIR SINE MIR -101 161 92 229 336 86 23 chr2 176653449 176653577 -74034277 - MIR3 SINE MIR -65 143 8 24 0 0 0 chr2 176654096 176654120 -74033734 + AT_rich Low_complexity Low_complexity 1 24 0 1368 216 33 77 chr2 176655273 176655755 -74032099 - LTR37B LTR ERV1 -7 461 1 6631 210 43 22 chr2 176656488 176659158 -74028696 - L1MB7 LINE L1 -19 6663 3935 2272 237 31 21 chr2 176659165 176659811 -74028043 + L1M3f LINE L1 1032 1652 -4090 * 3961 224 72 52 chr2 176659804 176661042 -74026812 - L1MB7 LINE L1 -5280 1262 1 1712 151 0 73 chr2 176661258 176661575 -74026279 - AluJo SINE Alu -7 305 12 1788 119 82 0 chr2 176662250 176662519 -74025335 - AluSx SINE Alu -21 291 1 491 221 127 17 chr2 176664473 176664654 -74023200 + L1ME4a LINE L1 5562 5762 -359 315 200 47 0 chr2 176664786 176664871 -74022983 + L1ME4a LINE L1 5970 6058 -63 1233 274 81 16 chr2 176666711 176667327 -74020527 + L1ME4a LINE L1 5421 6076 -45 24 0 0 0 chr2 176668364 176668388 -74019466 + AT_rich Low_complexity Low_complexity 1 24 0 360 291 97 18 chr2 176668746 176668911 -74018943 + MIR3 SINE MIR 16 193 -15 285 29 0 0 chr2 176670007 176670041 -74017813 + (TA)n Simple_repeat Simple_repeat 2 35 0 2191 118 0 0 chr2 176670042 176670339 -74017515 - AluSx SINE Alu -14 298 2 308 295 45 18 chr2 176670717 176670829 -74017025 + L2 LINE L2 3199 3313 0 357 362 51 62 chr2 176671025 176671473 -74016381 - L2 LINE L2 -6 3266 2824 1171 283 78 25 chr2 176674558 176675035 -74012819 + MLT1J LTR MaLR 8 509 -2 306 0 0 0 chr2 176675269 176675303 -74012551 + (TG)n Simple_repeat Simple_repeat 2 35 0 22 0 0 0 chr2 176675303 176675325 -74012529 + AT_rich Low_complexity Low_complexity 1 22 0 7396 123 27 30 chr2 176675332 176676566 -74011288 - Tigger3b DNA MER2_type 0 1231 2 252 77 0 0 chr2 176676567 176676606 -74011248 + (TG)n Simple_repeat Simple_repeat 2 40 0 313 263 285 15 chr2 176676611 176676748 -74011106 - MIR SINE MIR -86 176 3 896 314 24 18 chr2 176677382 176677716 -74010138 - MLT1I LTR MaLR 0 409 74 269 391 47 26 chr2 176677809 176678001 -74009853 + L2 LINE L2 2869 3064 -208 343 289 96 0 chr2 176678312 176678416 -74009438 + MLT1F LTR MaLR 299 412 -130 271 287 127 47 chr2 176678976 176679045 -74008809 - MER5B DNA MER1_type -2 176 114 2337 82 0 0 chr2 176679045 176679339 -74008515 + AluY SINE Alu 1 294 -17 271 287 127 47 chr2 176679339 176679419 -74008435 - MER5B DNA MER1_type -64 114 15 29 0 0 0 chr2 176680193 176680222 -74007632 + AT_rich Low_complexity Low_complexity 1 29 0 29 28 0 0 chr2 176680248 176680284 -74007570 + AT_rich Low_complexity Low_complexity 1 36 0 2026 59 0 8 chr2 176680708 176680990 -74006864 + AluY SINE Alu 32 311 0 197 59 59 0 chr2 176681684 176681718 -74006136 + A-rich Low_complexity Low_complexity 2 37 0 2919 180 26 4 chr2 176681903 176682441 -74005413 + MER44D DNA MER2_type 1 605 0 237 91 0 68 chr2 176683196 176683240 -74004614 + MADE1 DNA Mariner 40 80 0 21 36 0 0 chr2 176683669 176683697 -74004157 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 176683957 176683979 -74003875 + AT_rich Low_complexity Low_complexity 1 22 0 279 0 0 0 chr2 176684802 176684833 -74003021 + (TAA)n Simple_repeat Simple_repeat 3 33 0 878 205 33 14 chr2 176686034 176686244 -74001610 - L1MA9 LINE L1 -22 6290 6077 * 1623 152 36 0 chr2 176686241 176686543 -74001311 + L1MA9 LINE L1 5763 6075 -237 22 35 0 0 chr2 176687506 176687535 -74000319 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 176687602 176687625 -74000229 + AT_rich Low_complexity Low_complexity 1 23 0 302 335 90 19 chr2 176688501 176688656 -73999198 - L2 LINE L2 -5 3267 3102 291 283 172 22 chr2 176689263 176689443 -73998411 - MIR SINE MIR -48 214 8 279 299 246 23 chr2 176689806 176690070 -73997784 - L2 LINE L2 0 3272 2950 421 285 184 13 chr2 176690250 176690408 -73997446 - MIR SINE MIR -63 199 15 232 274 0 0 chr2 176690425 176690476 -73997378 - L2 LINE L2 -498 2816 2766 509 234 28 0 chr2 176690502 176690609 -73997245 + MER5A DNA MER1_type 80 189 0 287 277 23 165 chr2 176691891 176692284 -73995570 + L2 LINE L2 2926 3262 -10 243 170 0 0 chr2 176692300 176692347 -73995507 + GA-rich Low_complexity Low_complexity 1 47 0 408 244 12 0 chr2 176692947 176693029 -73994825 - L2 LINE L2 -6 3307 3225 184 335 69 73 chr2 176693096 176693329 -73994525 - L2 LINE L2 -69 3244 3013 1293 164 82 39 chr2 176694013 176694341 -73993513 - AluJb SINE Alu 0 302 1 24 0 0 0 chr2 176694411 176694435 -73993419 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr2 176694886 176694907 -73992947 + (TTA)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr2 176695173 176695194 -73992660 + AT_rich Low_complexity Low_complexity 1 21 0 2476 172 26 41 chr2 176696234 176696774 -73991080 - L1MC1 LINE L1 -13 6320 5789 21 0 0 0 chr2 176696781 176696802 -73991052 + AT_rich Low_complexity Low_complexity 1 21 0 7654 20 0 0 chr2 176696828 176698451 -73989403 - L1PA3 LINE L1 0 6155 4531 1783 171 98 0 chr2 176698451 176698779 -73989075 - L1MC1 LINE L1 -538 5795 5436 2296 64 3 0 chr2 176699183 176699512 -73988342 + AluY SINE Alu 1 330 0 284 122 0 0 chr2 176699576 176699625 -73988229 - L1MC1 LINE L1 -13 6320 6272 22 35 0 0 chr2 176700399 176700428 -73987426 + AT_rich Low_complexity Low_complexity 1 29 0 367 172 126 0 chr2 176700891 176700978 -73986876 - L1PA16 LINE L1 -17 6149 6052 478 389 46 39 chr2 176701065 176701476 -73986378 + L2 LINE L2 2858 3271 -1 187 340 142 9 chr2 176702062 176702168 -73985686 - L2 LINE L2 -8 3305 3186 494 272 92 80 chr2 176702258 176702607 -73985247 - MLT1H LTR MaLR -185 364 12 2954 233 81 37 chr2 176703846 176705028 -73982826 + L1ME1 LINE L1 4930 6161 -5 466 271 65 47 chr2 176705042 176705212 -73982642 - L2 LINE L2 -711 2603 2431 208 279 0 70 chr2 176705203 176705289 -73982565 + MIR SINE MIR 182 261 -1 * 241 324 83 48 chr2 176705473 176705618 -73982236 - L2 LINE L2 0 3313 3164 541 353 160 20 chr2 176705869 176706357 -73981497 - L2 LINE L2 -443 2871 2316 2168 110 0 0 chr2 176706988 176707279 -73980575 + AluSg SINE Alu 2 292 -18 189 0 0 0 chr2 176707282 176707303 -73980551 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 962 140 0 0 chr2 176708139 176708275 -73979579 + AluJo SINE Alu 1 136 -176 1564 209 3 3 chr2 176708276 176708582 -73979272 + AluJo SINE Alu 3 308 -4 22 0 0 0 chr2 176708942 176708964 -73978890 + AT_rich Low_complexity Low_complexity 1 22 0 941 232 0 0 chr2 176709540 176709721 -73978133 + AluJo SINE Alu 101 281 -31 2052 95 76 84 chr2 176709878 176710258 -73977596 + MER51B LTR ERV1 1 377 0 244 270 174 9 chr2 176711026 176711141 -73976713 + HAL1 LINE L1 259 392 -2115 339 220 197 8 chr2 176711266 176711398 -73976456 + HAL1 LINE L1 1759 1915 -592 1261 187 9 22 chr2 176713195 176713425 -73974429 + MSTD LTR MaLR 1 227 -169 5854 92 35 14 chr2 176714291 176715179 -73972675 - L1PA14 LINE L1 -1 6160 5254 1694 179 0 17 chr2 176715645 176715942 -73971912 - AluJo SINE Alu -20 292 1 453 307 59 38 chr2 176716740 176716978 -73970876 + MIR SINE MIR 5 247 -15 4140 205 34 17 chr2 176717239 176718460 -73969394 - L1P4 LINE L1 -590 5571 4335 284 285 161 9 chr2 176718646 176718814 -73969040 - MIR SINE MIR -21 241 50 352 356 76 48 chr2 176721171 176721525 -73966329 - L2 LINE L2 -12 3260 2897 269 200 33 17 chr2 176721994 176722054 -73965800 + MIR SINE MIR 71 131 -131 1707 281 115 14 chr2 176722683 176723377 -73964477 + L2 LINE L2 2134 2897 -417 593 300 78 46 chr2 176723384 176723754 -73964100 - L2 LINE L2 -925 2389 2008 254 332 88 10 chr2 176723755 176723948 -73963906 - L2 LINE L2 -1497 1817 1610 505 295 71 68 chr2 176724137 176724605 -73963249 + L1MEc LINE L1 2148 2597 -3618 354 45 0 0 chr2 176724605 176724649 -73963205 + (TGAG)n Simple_repeat Simple_repeat 1 44 0 505 295 71 68 chr2 176724649 176724842 -73963012 + L1MEc LINE L1 2597 2788 -3427 21 57 0 0 chr2 176726336 176726371 -73961483 + AT_rich Low_complexity Low_complexity 1 35 0 303 343 28 0 chr2 176726965 176727073 -73960781 + MIR SINE MIR 106 216 -46 513 328 22 31 chr2 176727352 176727583 -73960271 - MIR SINE MIR -3 259 33 35 24 0 0 chr2 176728603 176728645 -73959209 + AT_rich Low_complexity Low_complexity 1 42 0 815 196 22 39 chr2 176728810 176728989 -73958865 + AluJb SINE Alu 120 295 -17 261 338 25 0 chr2 176728993 176729073 -73958781 - L2 LINE L2 -40 3273 3192 435 289 33 67 chr2 176730027 176730207 -73957647 + MER5B DNA MER1_type 1 174 -4 1175 188 63 7 chr2 176730278 176730356 -73957498 - MER33 DNA MER1_type -2265 320 248 2023 135 0 13 chr2 176730356 176730660 -73957194 - AluSq SINE Alu -13 300 1 1175 188 63 7 chr2 176730660 176730884 -73956970 - MER33 DNA MER1_type -2337 248 1 356 290 130 0 chr2 176731209 176731347 -73956507 + MIR SINE MIR 106 261 -1 628 278 41 21 chr2 176731391 176731682 -73956172 - L1ME LINE L1 -302 5819 5523 1239 72 0 0 chr2 176733704 176733871 -73953983 + (GAAA)n Simple_repeat Simple_repeat 2 168 0 255 61 35 70 chr2 176734488 176734602 -73953252 + (TATAA)n Simple_repeat Simple_repeat 4 113 0 267 270 46 72 chr2 176736563 176736715 -73951139 - MER5A DNA MER1_type -30 159 12 21 36 0 0 chr2 176736894 176736922 -73950932 + AT_rich Low_complexity Low_complexity 1 28 0 2240 141 77 10 chr2 176737173 176737591 -73950263 - L1PA16 LINE L1 -1 6165 5720 5491 231 56 20 chr2 176737591 176738561 -73949293 + L1P LINE L1 3041 4089 -2057 2016 110 28 0 chr2 176738561 176738893 -73948961 + AluSc SINE Alu 1 309 0 5491 231 56 20 chr2 176738893 176739453 -73948401 + L1P LINE L1 4089 4627 -1519 230 62 0 0 chr2 176739460 176739492 -73948362 + L1P LINE L1 4759 4790 -1356 333 333 61 27 chr2 176740549 176740696 -73947158 - MIR SINE MIR -101 161 10 2116 168 79 8 chr2 176740932 176741326 -73946528 + MSTB LTR MaLR 5 426 0 461 348 83 21 chr2 176742384 176742758 -73945096 + L2 LINE L2 2474 2870 -444 210 246 33 33 chr2 176742826 176742887 -73944967 - MIR SINE MIR -133 129 69 239 321 0 127 chr2 176744379 176744513 -73943341 + MIR3 SINE MIR 87 203 -5 1540 180 21 3 chr2 176744824 176745108 -73942746 - AluJb SINE Alu -23 289 1 2438 50 0 3 chr2 176745327 176745629 -73942225 + AluY SINE Alu 1 301 -10 202 257 19 0 chr2 176745954 176746059 -73941795 + GA-rich Low_complexity Low_complexity 2 108 0 294 95 0 0 chr2 176746404 176746446 -73941408 + (T)n Simple_repeat Simple_repeat 1 42 0 729 285 59 22 chr2 176747140 176747410 -73940444 - MLT2F LTR ERVL -308 355 76 603 0 0 0 chr2 176747411 176747478 -73940376 + (TTAGGG)n Simple_repeat Simple_repeat 3 69 0 378 0 0 0 chr2 176748296 176748338 -73939516 + (TC)n Simple_repeat Simple_repeat 2 43 0 * 396 55 0 0 chr2 176748337 176748392 -73939462 + (TA)n Simple_repeat Simple_repeat 2 56 0 346 230 11 53 chr2 176748548 176748783 -73939071 + C-rich Low_complexity Low_complexity 1 224 0 21 0 0 0 chr2 176748969 176748990 -73938864 + GC_rich Low_complexity Low_complexity 1 21 0 213 273 130 0 chr2 176749776 176749853 -73938001 - L2 LINE L2 -43 3229 3143 853 222 5 15 chr2 176749856 176750059 -73937795 - MER3 DNA MER1_type -8 201 1 236 208 0 65 chr2 176750171 176750248 -73937606 - L1MC4 LINE L1 -1328 6714 6643 1527 131 88 54 chr2 176750406 176750703 -73937151 - AluJb SINE Alu -5 307 1 229 264 42 69 chr2 176751070 176751214 -73936640 - L1M4c LINE L1 -4522 1862 1723 439 97 11 86 chr2 176751214 176751307 -73936547 - L1PA11 LINE L1 0 6174 6089 330 256 212 0 chr2 176751337 176751474 -73936380 - MIR SINE MIR -5 257 92 21 57 0 0 chr2 176752509 176752544 -73935310 + AT_rich Low_complexity Low_complexity 1 35 0 227 283 38 66 chr2 176752668 176752774 -73935080 - MIR SINE MIR -71 191 89 543 199 133 72 chr2 176753034 176753200 -73934654 + MER5B DNA MER1_type 1 176 -2 232 278 0 0 chr2 176753590 176753644 -73934210 - L2 LINE L2 -4 3268 3215 1999 141 0 10 chr2 176753661 176753952 -73933902 + AluSx SINE Alu 1 288 -24 372 279 98 9 chr2 176754092 176754281 -73933573 - MIR SINE MIR -10 252 36 245 352 140 22 chr2 176756361 176756540 -73931314 + MIR SINE MIR 57 256 -6 408 261 182 23 chr2 176757524 176757700 -73930154 + MIR SINE MIR 23 226 -36 210 265 38 0 chr2 176757840 176757972 -73929882 + (TA)n Simple_repeat Simple_repeat 2 138 0 2385 67 0 7 chr2 176758146 176758443 -73929411 - AluSc SINE Alu -14 295 1 399 41 0 0 chr2 176759712 176759761 -73928093 + (CA)n Simple_repeat Simple_repeat 2 50 0 530 327 80 55 chr2 176760163 176760637 -73927217 - L2 LINE L2 -680 2634 2149 27 0 0 0 chr2 176761084 176761111 -73926743 + AT_rich Low_complexity Low_complexity 1 27 0 4910 62 43 0 chr2 176761119 176761766 -73926088 - L1PA7 LINE L1 0 6154 5480 31 0 0 0 chr2 176763039 176763070 -73924784 + AT_rich Low_complexity Low_complexity 1 31 0 20955 163 32 13 chr2 176763231 176768102 -73919752 - L1 LINE L1 -2579 4986 10 631 300 45 21 chr2 176768255 176768498 -73919356 + MIR SINE MIR 2 250 -12 23 33 0 0 chr2 176768502 176768532 -73919322 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 176769065 176769093 -73918761 + AT_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr2 176770049 176770076 -73917778 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 325 272 20 48 chr2 176770674 176770821 -73917033 + L1ME LINE L1 4477 4619 -1527 406 294 109 35 chr2 176770885 176771232 -73916622 + L1ME LINE L1 5016 5388 -758 301 321 30 48 chr2 176771242 176771410 -73916444 + L1ME LINE L1 5412 5576 -545 234 273 0 0 chr2 176771717 176771772 -73916082 + (CATA)n Simple_repeat Simple_repeat 2 56 0 21 0 0 0 chr2 176772210 176772231 -73915623 + AT_rich Low_complexity Low_complexity 1 21 0 6929 137 45 7 chr2 176773574 176774760 -73913094 - Tigger3b DNA MER2_type 0 1231 1 2186 126 3 0 chr2 176774805 176775115 -73912739 - AluSq SINE Alu -2 311 1 2459 113 17 11 chr2 176776732 176777094 -73910760 + THE1B LTR MaLR 1 364 0 239 285 93 40 chr2 176777189 176777340 -73910514 + MIR SINE MIR 76 234 -28 343 304 150 43 chr2 176777388 176777829 -73910025 + LTR16C LTR ERVL 1 488 -3 1166 214 111 92 chr2 176777873 176778232 -73909622 + MLT2B1 LTR ERVL 1 366 -48 276 30 0 0 chr2 176778243 176778276 -73909578 + (TG)n Simple_repeat Simple_repeat 2 34 0 205 340 117 43 chr2 176778891 176779053 -73908801 + MIR3 SINE MIR 21 194 -14 812 191 135 85 chr2 176779184 176779525 -73908329 - MER69 DNA AcHobo -50 2476 2119 577 252 26 104 chr2 176779529 176779838 -73908016 - MER69 DNA AcHobo -1267 1259 975 262 256 24 24 chr2 176779915 176779997 -73907857 - L1MC4 LINE L1 -37 8005 7924 1113 290 161 22 chr2 176780011 176780771 -73907083 - MER69 DNA AcHobo -1591 935 1 512 336 29 0 chr2 176780861 176781102 -73906752 + L1MC4 LINE L1 7792 8039 -3 283 213 12 50 chr2 176781112 176781192 -73906662 - MIR SINE MIR -102 160 84 2020 145 119 13 chr2 176781427 176781814 -73906040 - MSTA LTR MaLR 0 428 1 2223 107 0 0 chr2 176781954 176782254 -73905600 - AluY SINE Alu -11 300 1 277 218 46 35 chr2 176782947 176783034 -73904820 - L2 LINE L2 -54 3259 3172 363 23 0 0 chr2 176783158 176783202 -73904652 + (CA)n Simple_repeat Simple_repeat 2 45 0 337 252 160 23 chr2 176783487 176783618 -73904236 - MIR SINE MIR -101 161 13 771 293 165 39 chr2 176783930 176784391 -73903463 - MLT1G LTR MaLR 0 590 72 24 77 0 0 chr2 176784421 176784473 -73903381 + AT_rich Low_complexity Low_complexity 1 52 0 3043 262 61 11 chr2 176785505 176786508 -73901346 + L1ME LINE L1 3530 4582 -1564 565 240 26 0 chr2 176786514 176786668 -73901186 + L1M4 LINE L1 2850 3007 -3139 23 54 0 0 chr2 176787163 176787200 -73900654 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr2 176787239 176787269 -73900585 + AT_rich Low_complexity Low_complexity 1 30 0 411 302 94 19 chr2 176787286 176787445 -73900409 - MIR3 SINE MIR -1 207 37 23 0 0 0 chr2 176789829 176789852 -73898002 + AT_rich Low_complexity Low_complexity 1 23 0 281 286 0 12 chr2 176790018 176790102 -73897752 + L2 LINE L2 3231 3313 0 250 369 108 0 chr2 176790114 176790244 -73897610 - MIR SINE MIR -99 163 20 23 0 0 0 chr2 176790378 176790401 -73897453 + AT_rich Low_complexity Low_complexity 1 23 0 398 213 139 25 chr2 176793041 176793163 -73894691 - MIR SINE MIR -4 258 123 214 333 24 0 chr2 176793419 176793503 -73894351 + MIR SINE MIR 1 86 -176 699 270 38 35 chr2 176794061 176794497 -73893357 + LTR33A LTR ERVL 3 523 0 857 173 82 53 chr2 176794820 176794885 -73892969 - MSTD LTR MaLR 0 396 334 2330 67 3 3 chr2 176794885 176795184 -73892670 + AluY SINE Alu 1 299 -12 857 173 82 53 chr2 176795184 176795326 -73892528 - MSTD LTR MaLR -62 334 183 683 167 42 8 chr2 176795327 176795447 -73892407 - FLAM_A SINE Alu -18 124 1 527 205 0 106 chr2 176795487 176795638 -73892216 - MSTD LTR MaLR -293 135 1 188 67 33 0 chr2 176797627 176797657 -73890197 + (CATA)n Simple_repeat Simple_repeat 2 32 0 23 0 0 0 chr2 176798259 176798282 -73889572 + AT_rich Low_complexity Low_complexity 1 23 0 378 308 81 58 chr2 176798317 176798882 -73888972 + L1ME LINE L1 4665 5242 -904 2342 99 0 3 chr2 176800019 176800322 -73887532 + AluSg SINE Alu 1 302 -8 228 284 224 0 chr2 176800355 176800538 -73887316 + L1ME LINE L1 5381 5604 -517 1483 126 126 54 chr2 176800897 176801175 -73886679 + AluSx SINE Alu 1 298 -14 1515 132 16 12 chr2 176851368 176851611 -73836243 + AluSc SINE Alu 1 244 -65 981 230 21 94 chr2 176852089 176852472 -73835382 + MLT1B LTR MaLR 36 390 0 294 277 38 38 chr2 176852540 176852699 -73835155 - L1ME LINE L1 -5358 712 554 538 264 12 30 chr2 176852700 176852867 -73834987 - MER77 LTR ERV1 -39 566 403 677 182 15 15 chr2 176853112 176853244 -73834610 - MSTB1 LTR MaLR 0 432 301 490 82 75 0 chr2 176854362 176854508 -73833346 + (TA)n Simple_repeat Simple_repeat 2 158 0 314 127 51 8 chr2 176854526 176854644 -73833210 + (TA)n Simple_repeat Simple_repeat 2 124 0 1265 36 24 0 chr2 176854774 176854939 -73832915 - L1P LINE L1 -1736 4410 4242 1768 114 57 4 chr2 176856137 176856399 -73831455 - AluSc SINE Alu -33 276 1 278 286 0 14 chr2 176856813 176856883 -73830971 + L2 LINE L2 3201 3269 -3 355 250 0 0 chr2 176857328 176857404 -73830450 - MER2 DNA MER2_type 0 345 270 722 155 135 7 chr2 176857432 176857580 -73830274 - MER2 DNA MER2_type -138 207 41 3141 53 2 0 chr2 176857947 176858341 -73829513 + L1P3 LINE L1 856 1250 -5211 350 197 80 29 chr2 176859486 176859623 -73828231 - MER113 DNA MER1_type? -376 145 2 197 309 232 17 chr2 176859657 176859838 -73828016 + MIR SINE MIR 40 259 -3 813 143 0 43 chr2 176859892 176860032 -73827822 + FLAM_C SINE Alu 1 134 -9 232 292 15 15 chr2 176860061 176860126 -73827728 - MIR SINE MIR -95 113 49 2795 0 0 0 chr2 176860264 176860562 -73827292 - AluYa5 SINE Alu -13 298 1 472 209 9 9 chr2 176860812 176860927 -73826927 - FLAM_C SINE Alu -22 121 7 611 179 36 14 chr2 176861113 176861253 -73826601 - L1ME1 LINE L1 -9 6157 6015 457 130 17 157 chr2 176861254 176861369 -73826485 - MLT1C LTR MaLR -368 99 1 1064 219 115 43 chr2 176861369 176861963 -73825891 - L1ME1 LINE L1 -543 5623 4976 5867 134 78 39 chr2 176861963 176862453 -73825401 - Tigger3b DNA MER2_type -1799 1229 760 1676 178 4 4 chr2 176862453 176862722 -73825132 - AluJo SINE Alu -30 282 14 5867 134 78 39 chr2 176862722 176863413 -73824441 - Tigger3b DNA MER2_type -2268 760 2 1064 219 115 43 chr2 176863413 176863444 -73824410 - L1ME1 LINE L1 -1190 4976 4949 2052 139 14 12 chr2 176863447 176863793 -73824061 - MER6 DNA MER2_type 0 865 259 1458 186 0 20 chr2 176864236 176864524 -73823330 - AluJb SINE Alu 0 318 36 2642 110 0 3 chr2 176864976 176865341 -73822513 + THE1B LTR MaLR 1 364 0 10495 108 6 62 chr2 176865341 176867015 -73820839 + THE1B-int LTR MaLR 1 1580 0 2616 114 3 0 chr2 176867017 176867378 -73820476 + THE1B LTR MaLR 3 364 0 239 133 22 0 chr2 176867421 176867466 -73820388 + CT-rich Low_complexity Low_complexity 1 46 0 1596 189 0 42 chr2 176869732 176870045 -73817809 - AluJb SINE Alu -12 300 1 2187 86 0 20 chr2 176870525 176870817 -73817037 - AluSc SINE Alu -5 304 19 27 0 0 0 chr2 176870917 176870944 -73816910 + AT_rich Low_complexity Low_complexity 1 27 0 234 358 96 32 chr2 176872747 176872965 -73814889 - L3b LINE CR1 -8 1575 1344 309 200 53 53 chr2 176873500 176873575 -73814279 - MIR SINE MIR -130 132 58 327 274 47 28 chr2 176873582 176873688 -73814166 + MER96 DNA MER1_type? 3 110 -65 2093 176 50 21 chr2 176874579 176874999 -73812855 + MSTB1 LTR MaLR 1 432 0 24 0 0 0 chr2 176875077 176875101 -73812753 + AT_rich Low_complexity Low_complexity 1 24 0 1131 249 56 76 chr2 176875138 176875640 -73812214 + MER77 LTR ERV1 75 566 -39 1314 237 99 40 chr2 176875641 176876497 -73811357 + L1ME LINE L1 554 1467 -4613 28 0 0 0 chr2 176876987 176877015 -73810839 + AT_rich Low_complexity Low_complexity 1 28 0 428 347 57 10 chr2 176877980 176878173 -73809681 - MIR SINE MIR -5 257 56 341 392 27 0 chr2 176880393 176880541 -73807313 + L2 LINE L2 3116 3267 -5 378 0 0 0 chr2 176880685 176880727 -73807127 + (TG)n Simple_repeat Simple_repeat 2 43 0 262 165 21 52 chr2 176881235 176881332 -73806522 + (TATAA)n Simple_repeat Simple_repeat 1 94 0 252 252 219 16 chr2 176881961 176882084 -73805770 - MIR SINE MIR -50 212 65 628 274 78 22 chr2 176882247 176882477 -73805377 - MIR SINE MIR -19 243 1 1620 201 31 0 chr2 176883028 176883347 -73804507 + MER2 DNA MER2_type 15 343 -2 315 0 0 0 chr2 176883347 176883382 -73804472 + (TG)n Simple_repeat Simple_repeat 2 36 0 26 50 0 0 chr2 176884274 176884314 -73803540 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr2 176884729 176884750 -73803104 + AT_rich Low_complexity Low_complexity 1 21 0 574 252 58 42 chr2 176885690 176886003 -73801851 + pTR5 LTR ERV1 738 1055 -1383 4059 106 79 145 chr2 176886059 176886943 -73800911 + LTR12 LTR ERV1 1 826 0 600 235 80 21 chr2 176888908 176889095 -73798759 + MIR SINE MIR 56 253 -9 236 339 87 67 chr2 176889419 176890136 -73797718 - L2 LINE L2 -1 3312 2575 181 0 33 33 chr2 176890886 176890916 -73796938 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 311 340 56 0 chr2 176891978 176892122 -73795732 - MIR SINE MIR -109 153 2 381 316 138 53 chr2 176892349 176892596 -73795258 - L2 LINE L2 -19 3253 2986 29 47 0 0 chr2 176893169 176893212 -73794642 + AT_rich Low_complexity Low_complexity 1 43 0 1781 236 106 2 chr2 176893666 176894170 -73793684 - L1MC4 LINE L1 -1024 7018 6464 1093 168 5 5 chr2 176895156 176895352 -73792502 - L1 LINE L1 -1375 4771 4576 1648 171 42 39 chr2 176895746 176896111 -73791743 - MER6 DNA MER2_type -78 66 -7 1104 221 37 8 chr2 176896112 176896356 -73791498 - L1M4 LINE L1 -1208 4938 4688 1030 161 75 5 chr2 176896699 176896885 -73790969 + MER30 DNA MER1_type 32 230 0 21 36 0 0 chr2 176897053 176897081 -73790773 + AT_rich Low_complexity Low_complexity 1 28 0 7208 47 5 0 chr2 176897782 176899371 -73788483 - L1PA5 LINE L1 0 6154 4564 934 85 8 0 chr2 176899560 176899724 -73788130 - AluSg/x SINE Alu 0 346 182 2624 10 3 0 chr2 176899725 176900022 -73787832 - AluYa5 SINE Alu -13 298 1 21 36 0 0 chr2 176900405 176900433 -73787421 + AT_rich Low_complexity Low_complexity 1 28 0 489 309 95 95 chr2 176900871 176901114 -73786740 + L2 LINE L2 1635 1877 -1437 1027 139 70 14 chr2 176901114 176901329 -73786525 + L1MA4 LINE L1 6074 6300 0 489 309 95 95 chr2 176901329 176902115 -73785739 + L2 LINE L2 1876 2664 -650 746 241 73 14 chr2 176902115 176902328 -73785526 + MLT1G1 LTR MaLR 1 181 -374 282 291 76 0 chr2 176902370 176902449 -73785405 + MLT1F1 LTR MaLR 140 224 -306 * 1596 199 104 31 chr2 176902446 176902802 -73785052 + MLT1F1 LTR MaLR 179 560 -7 680 183 8 0 chr2 176902896 176903016 -73784838 + FLAM_A SINE Alu 10 130 -12 315 283 43 11 chr2 176903054 176903146 -73784708 + L2 LINE L2 3203 3297 -16 636 202 173 133 chr2 176904491 176904867 -73782987 + MSTD LTR MaLR 4 394 -2 203 279 152 82 chr2 176904869 176905027 -73782827 + MIR3 SINE MIR 30 198 -10 23 0 0 0 chr2 176905802 176905825 -73782029 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 176906435 176906460 -73781394 + AT_rich Low_complexity Low_complexity 1 25 0 735 245 211 0 chr2 176907524 176907732 -73780122 + MIR SINE MIR 3 254 -8 481 203 203 20 chr2 176908082 176908230 -73779624 - MER3 DNA MER1_type -80 129 2 237 91 0 0 chr2 176909249 176909282 -73778572 + MER53 DNA DNA 1 33 -156 369 339 20 26 chr2 176909771 176909966 -73777888 + L1ME3A LINE L1 2575 2768 -3378 371 227 82 56 chr2 176909968 176910272 -73777582 + L1ME3A LINE L1 2969 3280 -2866 31 0 0 0 chr2 176910481 176910512 -73777342 + AT_rich Low_complexity Low_complexity 1 31 0 498 69 0 28 chr2 176910702 176910794 -73777060 + Alu SINE Alu 225 311 0 2058 113 10 0 chr2 176910959 176911250 -73776604 + AluSc SINE Alu 1 294 -15 1121 272 138 31 chr2 176911525 176912886 -73774968 + L1ME3A LINE L1 4383 5885 -285 21 0 0 0 chr2 176914541 176914562 -73773292 + AT_rich Low_complexity Low_complexity 1 21 0 739 276 145 4 chr2 176917180 176917408 -73770446 - MIR SINE MIR -1 261 2 308 196 18 0 chr2 176917820 176917876 -73769978 - MER82 DNA MER2_type 0 653 597 243 121 91 45 chr2 176917897 176917963 -73769891 + Tigger5 DNA MER2_type 2250 2318 -5 412 177 76 0 chr2 176918012 176918091 -73769763 - Tigger5 DNA MER2_type -2238 85 1 2454 195 71 45 chr2 176918175 176918754 -73769100 - MER82 DNA MER2_type -59 594 1 781 128 14 7 chr2 176919391 176919539 -73768315 + GA-rich Low_complexity Low_complexity 1 149 0 318 132 0 0 chr2 176919818 176919871 -73767983 + (GGGA)n Simple_repeat Simple_repeat 3 55 0 247 131 0 49 chr2 176919871 176919932 -73767922 + (GAAAA)n Simple_repeat Simple_repeat 1 58 0 1447 199 136 19 chr2 176920768 176921186 -73766668 + MLT1C LTR MaLR 1 467 0 1739 153 21 73 chr2 176921221 176921606 -73766248 + L1MA9 LINE L1 5941 6305 -7 1972 128 14 0 chr2 176922020 176922309 -73765545 + AluSq SINE Alu 1 293 -20 245 232 43 58 chr2 176922310 176922379 -73765475 - MIR3 SINE MIR -21 187 120 21 36 0 0 chr2 176922491 176922519 -73765335 + AT_rich Low_complexity Low_complexity 1 28 0 284 317 14 7 chr2 176922843 176922988 -73764866 + (TA)n Simple_repeat Simple_repeat 2 147 0 29 28 0 0 chr2 176924297 176924333 -73763521 + AT_rich Low_complexity Low_complexity 1 36 0 529 78 84 0 chr2 176924333 176924499 -73763355 + (TA)n Simple_repeat Simple_repeat 1 180 0 452 92 63 29 chr2 176924517 176924691 -73763163 + (TA)n Simple_repeat Simple_repeat 1 180 0 33 25 0 0 chr2 176924691 176924731 -73763123 + AT_rich Low_complexity Low_complexity 1 40 0 248 365 93 0 chr2 176924801 176924908 -73762946 - L2 LINE L2 0 3272 3156 218 328 0 0 chr2 176925123 176925187 -73762667 - L2 LINE L2 -300 2972 2909 262 222 0 0 chr2 176925572 176925626 -73762228 + L2 LINE L2 3250 3303 -10 192 391 75 12 chr2 176926345 176926506 -73761348 - MIR3 SINE MIR -14 194 24 181 400 56 16 chr2 176926885 176927010 -73760844 + L2 LINE L2 3180 3309 -4 195 313 36 0 chr2 176927221 176927304 -73760550 + MIR3 SINE MIR 121 206 -2 1113 92 37 0 chr2 176928051 176928215 -73759639 - MER30 DNA MER1_type -60 170 1 483 289 0 16 chr2 176928652 176928773 -73759081 + MIR SINE MIR 27 145 -117 283 248 152 76 chr2 176932499 176932697 -73755157 - L2 LINE L2 0 3313 3101 326 359 19 0 chr2 176932796 176932899 -73754955 - MIR3 SINE MIR -21 187 83 22 0 0 0 chr2 176933263 176933285 -73754569 + AT_rich Low_complexity Low_complexity 1 22 0 458 252 161 26 chr2 176933392 176933547 -73754307 - MIR3 SINE MIR -14 194 19 276 30 0 0 chr2 176933677 176933710 -73754144 + (CA)n Simple_repeat Simple_repeat 2 34 0 2057 37 4 0 chr2 176933894 176934135 -73753719 - AluY SINE Alu -3 308 67 24 77 0 0 chr2 176934232 176934284 -73753570 + AT_rich Low_complexity Low_complexity 1 52 0 1816 131 25 7 chr2 176935409 176935705 -73752149 - AluSx SINE Alu 0 312 9 260 281 36 50 chr2 176935871 176936010 -73751844 + MARNA DNA Mariner 244 380 -206 1518 192 28 10 chr2 176936914 176937205 -73750649 + AluJb SINE Alu 2 297 -15 282 262 92 57 chr2 176937693 176937834 -73750020 + L2 LINE L2 478 623 -2691 361 307 216 0 chr2 176937992 176938145 -73749709 - MER5A DNA MER1_type 0 189 4 325 257 40 69 chr2 176938194 176938295 -73749559 + L2 LINE L2 3171 3268 -4 1912 158 0 3 chr2 176938364 176938661 -73749193 - AluSx SINE Alu -16 296 1 294 29 0 0 chr2 176939837 176939872 -73747982 + (CA)n Simple_repeat Simple_repeat 2 36 0 247 93 0 37 chr2 176941105 176941159 -73746695 + (TAAAA)n Simple_repeat Simple_repeat 2 53 0 188 254 0 14 chr2 176943201 176943272 -73744582 + GA-rich Low_complexity Low_complexity 4 73 0 212 271 0 0 chr2 176943277 176943336 -73744518 + A-rich Low_complexity Low_complexity 1 59 0 27 0 0 0 chr2 176943929 176943956 -73743898 + AT_rich Low_complexity Low_complexity 1 27 0 210 89 36 18 chr2 176943980 176944036 -73743818 + (TTAAA)n Simple_repeat Simple_repeat 1 57 0 1158 173 101 4 chr2 176945559 176945807 -73742047 - L1MD1 LINE L1 -8 6234 5963 2898 176 49 5 chr2 176945561 176946158 -73741696 - L1MD1 LINE L1 -10 6232 5610 3416 183 20 16 chr2 176946158 176946887 -73740967 - L1MC1 LINE L1 -411 5922 5200 1589 270 43 23 chr2 176946900 176947545 -73740309 - L1MC1 LINE L1 -2259 3887 3230 951 176 0 0 chr2 176947605 176947758 -73740096 + L1P LINE L1 712 864 -5282 5259 204 17 59 chr2 176947760 176948741 -73739113 - L1 LINE L1 -1576 4570 3549 231 36 0 0 chr2 176948741 176948769 -73739085 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 1061 140 0 7 chr2 176948770 176948920 -73738934 - AluSg/x SINE Alu -33 279 131 238 143 0 0 chr2 176948920 176948955 -73738899 - Alu SINE Alu -268 35 1 5259 204 17 59 chr2 176948955 176949568 -73738286 - L1 LINE L1 -2595 3551 2973 1143 245 58 71 chr2 176949580 176950184 -73737670 + HAL1 LINE L1 1908 2503 -4 2046 178 59 13 chr2 176950438 176950793 -73737061 + MLT2D LTR ERVL 1 377 -37 360 0 0 0 chr2 176950793 176950833 -73737021 + (CA)n Simple_repeat Simple_repeat 2 41 0 2046 178 59 13 chr2 176950833 176950865 -73736989 + MLT2D LTR ERVL 377 406 -8 252 299 104 30 chr2 176951207 176951314 -73736540 + MIR SINE MIR 31 156 -106 2220 94 17 0 chr2 176951314 176951601 -73736253 + AluSg SINE Alu 1 292 -18 252 299 104 30 chr2 176951601 176951657 -73736197 + MIR SINE MIR 156 206 -56 230 118 0 59 chr2 176951798 176951849 -73736005 + (GGGAGA)n Simple_repeat Simple_repeat 1 48 0 3678 93 0 2 chr2 176952531 176953034 -73734820 - L1PA7 LINE L1 -1 6153 5652 30164 121 11 67 chr2 176953134 176958642 -73729212 - L1PA7 LINE L1 -935 5211 13 189 313 181 14 chr2 176958726 176958870 -73728984 + L2 LINE L2 2929 3096 -176 21 0 0 0 chr2 176959061 176959082 -73728772 + AT_rich Low_complexity Low_complexity 1 21 0 357 345 86 0 chr2 176960064 176960238 -73727616 - MER5A DNA MER1_type 0 189 1 2206 113 0 6 chr2 176960402 176960713 -73727141 - AluSc SINE Alu 0 309 1 321 272 76 11 chr2 176961129 176961221 -73726633 + MIR SINE MIR 24 121 -141 22 0 0 0 chr2 176962905 176962927 -73724927 + AT_rich Low_complexity Low_complexity 1 22 0 2294 86 3 3 chr2 176962927 176963229 -73724625 - AluY SINE Alu -7 304 3 558 252 21 14 chr2 176963245 176963388 -73724466 - MIR SINE MIR -56 206 63 265 381 22 15 chr2 176964797 176964931 -73722923 - L2 LINE L2 -15 3257 3123 22 35 0 0 chr2 176965517 176965546 -73722308 + AT_rich Low_complexity Low_complexity 1 29 0 472 236 167 7 chr2 176966396 176966540 -73721314 + MER5A DNA MER1_type 23 189 0 303 221 78 0 chr2 176966604 176966681 -73721173 + MER5A DNA MER1_type 22 104 -85 206 32 32 0 chr2 176966990 176967021 -73720833 + (TA)n Simple_repeat Simple_repeat 2 33 0 1941 117 52 44 chr2 176967057 176967443 -73720411 - L1MA5 LINE L1 -10 6290 5902 2833 155 31 4 chr2 176967444 176967955 -73719899 - L1MA5 LINE L1 -485 5815 5291 268 264 0 0 chr2 176970611 176970664 -73717190 + G-rich Low_complexity Low_complexity 3 55 0 25 31 0 0 chr2 176971001 176971033 -73716821 + AT_rich Low_complexity Low_complexity 1 32 0 252 86 0 0 chr2 176971381 176971416 -73716438 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 1658 155 17 21 chr2 176971644 176971935 -73715919 - AluJo SINE Alu -22 290 1 461 199 169 29 chr2 176973920 176974056 -73713798 - Tigger2 DNA MER2_type -10 2708 2554 * 580 119 136 0 chr2 176974055 176974173 -73713681 - Tigger2 DNA MER2_type -2508 210 77 343 91 0 0 chr2 176974287 176974331 -73713523 + MER8 DNA MER2_type 193 236 -3 180 0 0 0 chr2 176974518 176974538 -73713316 + (A)n Simple_repeat Simple_repeat 1 20 0 1025 96 186 30 chr2 176975351 176975550 -73712304 - MER30 DNA MER1_type 0 230 1 358 247 286 0 chr2 176976607 176976789 -73711065 + L2 LINE L2 1357 1590 -1724 3693 257 120 40 chr2 176976943 176978558 -73709296 + L2 LINE L2 1585 3313 0 22 0 0 0 chr2 176982178 176982200 -73705654 + AT_rich Low_complexity Low_complexity 1 22 0 336 102 0 0 chr2 176982286 176982335 -73705519 + (TG)n Simple_repeat Simple_repeat 2 50 0 252 317 61 30 chr2 176982408 176982572 -73705282 + MIR SINE MIR 75 243 -19 342 359 10 0 chr2 176982719 176982822 -73705032 - MIR3 SINE MIR -42 166 63 180 0 0 0 chr2 176983484 176983504 -73704350 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 246 238 74 5 chr2 176985672 176985769 -73702085 - L1M4 LINE L1 -363 5758 5691 225 0 0 0 chr2 176986444 176986469 -73701385 + (A)n Simple_repeat Simple_repeat 1 25 0 22 0 0 0 chr2 176987247 176987269 -73700585 + AT_rich Low_complexity Low_complexity 1 22 0 1161 201 71 7 chr2 176987598 176987892 -73699962 + MER33 DNA MER1_type 1 313 -11 1655 247 75 61 chr2 176989585 176990404 -73697450 - L1MC4 LINE L1 -3 8039 7210 1539 146 164 56 chr2 176990404 176990781 -73697073 + MSTB1 LTR MaLR 1 418 -14 810 215 130 52 chr2 176990876 176991146 -73696708 - L1MC4 LINE L1 -989 7053 6763 1772 279 49 22 chr2 176991891 176992528 -73695326 + L2 LINE L2 1607 2260 -1054 5458 153 31 45 chr2 176992529 176993698 -73694156 + L1MC1 LINE L1 5164 6316 -17 25 83 0 0 chr2 176993700 176993760 -73694094 + AT_rich Low_complexity Low_complexity 1 60 0 1377 96 5 15 chr2 176994782 176994981 -73692873 - MER107 DNA MER1_type 0 197 1 238 282 63 21 chr2 176995944 176996086 -73691768 + L1ME3A LINE L1 5793 5940 -230 418 191 235 19 chr2 176996411 176996573 -73691281 - MIR SINE MIR -10 252 56 185 238 62 75 chr2 176997864 176997944 -73689910 - L2 LINE L2 -1 3271 3193 204 301 0 48 chr2 176998893 176998976 -73688878 - L2 LINE L2 0 3313 3235 618 316 142 66 chr2 176999182 176999951 -73687903 - L2 LINE L2 -338 2976 2150 460 274 33 46 chr2 177001119 177001272 -73686582 - L2 LINE L2 -4 3268 3118 646 237 17 6 chr2 177001547 177001720 -73686134 - MER5B DNA MER1_type -3 175 1 630 274 94 38 chr2 177003198 177003622 -73684232 + L1ME4a LINE L1 5617 6064 -57 2499 123 43 7 chr2 177003640 177004062 -73683792 - Tigger4(Zombi) DNA MER2_type 0 2731 2295 445 177 101 0 chr2 177004059 177004138 -73683716 - Tigger4(Zombi) DNA MER2_type -2644 87 1 * 244 230 287 0 chr2 177004346 177004433 -73683421 + MIR SINE MIR 71 182 -80 559 278 92 6 chr2 177004511 177004684 -73683170 - MIR3 SINE MIR -9 199 12 669 154 148 12 chr2 177005066 177005235 -73682619 + L1MD3 LINE L1 7678 7869 -126 2102 92 11 0 chr2 177005526 177005799 -73682055 + AluSg SINE Alu 17 292 -18 418 298 63 20 chr2 177005994 177006246 -73681608 - AluSc SINE Alu 0 309 47 702 164 0 0 chr2 177106606 177106771 -73581083 + C-rich Low_complexity Low_complexity 1 165 0 2724 184 6 4 chr2 177106797 177107330 -73580524 + L1P LINE L1 2103 2636 -3510 5690 112 32 2 chr2 177107336 177108241 -73579613 + L1PA10 LINE L1 5219 6149 -19 334 252 125 35 chr2 177108414 177108702 -73579152 + L1 LINE L1 3032 3340 -2806 2924 181 7 4 chr2 177110531 177111078 -73576776 + L1PA16 LINE L1 5608 6156 -10 205 200 0 0 chr2 177111364 177111404 -73576450 + T-rich Low_complexity Low_complexity 1 40 0 6494 70 11 0 chr2 177111558 177113175 -73574679 - L1PA7 LINE L1 -13 6141 4519 22 0 0 0 chr2 177113207 177113229 -73574625 + AT_rich Low_complexity Low_complexity 1 22 0 206 329 51 25 chr2 177113306 177113385 -73574469 + L2 LINE L2 3007 3087 -185 247 370 36 16 chr2 177114280 177114472 -73573382 + MIR SINE MIR 12 207 -55 30 59 0 0 chr2 177116871 177116922 -73570932 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr2 177116988 177117011 -73570843 + AT_rich Low_complexity Low_complexity 1 23 0 367 256 119 23 chr2 177117139 177117315 -73570539 + HAL1 LINE L1 1712 1904 -603 1495 201 47 14 chr2 177117352 177117716 -73570138 + L1MA9 LINE L1 5593 5968 -323 1282 122 0 37 chr2 177117716 177117905 -73569949 + AluSg/x SINE Alu 99 280 -32 285 29 0 0 chr2 177117907 177117941 -73569913 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7642 142 21 49 chr2 177117946 177119767 -73568087 + L1MA3 LINE L1 2231 3998 -3567 3721 137 21 6 chr2 177119765 177120777 -73567077 - THE1C-int LTR MaLR -514 1066 1 * 2741 115 0 0 chr2 177120777 177121150 -73566704 - THE1C LTR MaLR 0 375 3 7519 158 20 12 chr2 177121151 177123599 -73564255 + L1MA3 LINE L1 5251 7719 -5 974 252 97 70 chr2 177123678 177123744 -73564110 - MER66A LTR ERV1 -40 438 375 2369 72 0 19 chr2 177123744 177124051 -73563803 - AluY SINE Alu -10 301 1 974 252 97 70 chr2 177124051 177124385 -73563469 - MER66A LTR ERV1 -103 375 27 526 133 188 16 chr2 177124396 177124524 -73563330 + L1MA9 LINE L1 6083 6232 -80 269 226 57 9 chr2 177124569 177124675 -73563179 + HAL1 LINE L1 2082 2192 -315 631 274 44 48 chr2 177125025 177125273 -73562581 + MLT1J LTR MaLR 5 251 -260 37 39 0 0 chr2 177125751 177125802 -73562052 + AT_rich Low_complexity Low_complexity 1 51 0 526 278 19 0 chr2 177125855 177126017 -73561837 + LTR65 LTR ERV1 3 167 -502 301 243 155 10 chr2 177126721 177126824 -73561030 + L1ME LINE L1 5316 5433 -688 1302 204 73 105 chr2 177126828 177127243 -73560611 + MLT1C LTR MaLR 18 418 -49 2009 90 3 3 chr2 177127243 177127531 -73560323 - L1PA13 LINE L1 -4 6159 5872 1302 204 73 105 chr2 177127531 177127580 -73560274 + MLT1C LTR MaLR 418 467 0 305 283 153 22 chr2 177127632 177127855 -73559999 + L1ME LINE L1 5521 5772 -349 1153 283 70 35 chr2 177131660 177132408 -73555446 + L2 LINE L2 2540 3313 0 1506 173 119 24 chr2 177133315 177133651 -73554203 - MSTA LTR MaLR -60 368 1 297 332 46 59 chr2 177133803 177134041 -73553813 - LTR16A LTR ERVL -78 372 138 * 510 239 65 40 chr2 177134035 177134376 -73553478 + MLT1F1 LTR MaLR 172 564 -3 254 250 0 0 chr2 177134403 177134451 -73553403 - LTR16A LTR ERVL -402 48 1 363 261 31 43 chr2 177134769 177134930 -73552924 - HERV16 LTR ERVL -301 4695 4537 744 362 50 20 chr2 177134931 177135881 -73551973 - ERVL LTR ERVL -776 4988 3991 1282 355 68 11 chr2 177136203 177136924 -73550930 - ERVL LTR ERVL -2191 3463 2702 1927 308 51 25 chr2 177137007 177137617 -73550237 - ERVL LTR ERVL -3447 1549 918 2105 128 3 0 chr2 177137617 177137923 -73549931 - AluSg SINE Alu -3 307 1 1927 308 51 25 chr2 177137923 177137998 -73549856 - ERVL LTR ERVL -4078 918 846 1052 316 40 22 chr2 177138033 177138529 -73549325 - ERVL LTR ERVL -4483 513 9 977 325 78 10 chr2 177138553 177138937 -73548917 - LTR16A LTR ERVL -32 418 9 446 135 21 42 chr2 177139259 177139355 -73548499 + L1MB8 LINE L1 6082 6175 -3 201 39 0 0 chr2 177139565 177139591 -73548263 + (TTG)n Simple_repeat Simple_repeat 1 26 0 230 324 78 10 chr2 177139831 177139933 -73547921 - L2 LINE L2 -2 3311 3203 25 31 0 0 chr2 177141815 177141847 -73546007 + AT_rich Low_complexity Low_complexity 1 32 0 539 281 50 12 chr2 177144065 177144225 -73543629 + MIR SINE MIR 71 236 -26 610 280 42 26 chr2 177144762 177144951 -73542903 + MIR SINE MIR 71 262 0 2802 7 3 0 chr2 177145126 177145433 -73542421 + AluYb8 SINE Alu 1 308 -10 478 174 20 0 chr2 177145433 177145531 -73542323 + L1MA5A LINE L1 6197 6296 -1 333 0 0 0 chr2 177145637 177145674 -73542180 + (TA)n Simple_repeat Simple_repeat 1 37 0 911 193 68 0 chr2 177145740 177145916 -73541938 + MER5A DNA MER1_type 1 188 -1 26 0 0 0 chr2 177145925 177145951 -73541903 + AT_rich Low_complexity Low_complexity 1 26 0 2119 93 0 10 chr2 177145951 177146240 -73541614 - AluSq SINE Alu -25 288 3 324 295 141 19 chr2 177146878 177147034 -73540820 + MIR SINE MIR 1 175 -87 427 259 132 13 chr2 177147069 177147297 -73540557 + MER20B DNA MER1_type 55 309 -474 3046 33 11 0 chr2 177150356 177150721 -73537133 + L1PA3 LINE L1 5786 6154 -1 189 107 0 0 chr2 177151528 177151556 -73536298 + (TA)n Simple_repeat Simple_repeat 2 29 0 1412 285 108 53 chr2 177153141 177153797 -73534057 + MER115 DNA AcHobo 1 692 -1 812 335 91 34 chr2 177153798 177154545 -73533309 + L2 LINE L2 1735 2524 -790 3517 195 36 18 chr2 177154656 177155548 -73532306 - Charlie6 DNA MER1_type 0 3500 2593 8833 203 58 25 chr2 177155599 177157157 -73530697 - Charlie6 DNA MER1_type -1269 2231 583 1517 205 22 43 chr2 177157157 177157528 -73530326 - MLT1A1 LTR MaLR -2 363 1 8833 203 58 25 chr2 177157528 177158078 -73529776 - Charlie6 DNA MER1_type -2917 583 53 22 88 0 0 chr2 177159463 177159520 -73528334 + AT_rich Low_complexity Low_complexity 1 57 0 1138 280 31 63 chr2 177159620 177160098 -73527756 + L1M3d LINE L1 1 463 -5428 * 4893 167 17 35 chr2 177160097 177162130 -73525724 + L1MB1 LINE L1 3997 6168 0 698 161 6 18 chr2 177164732 177164900 -73522954 + CT-rich Low_complexity Low_complexity 3 168 0 183 275 0 0 chr2 177164918 177164958 -73522896 - L2 LINE L2 -17 3296 3257 372 88 0 0 chr2 177165029 177165086 -73522768 + (CA)n Simple_repeat Simple_repeat 2 58 0 596 337 126 39 chr2 177165537 177166466 -73521388 + L2 LINE L2 1691 2700 -614 214 379 19 25 chr2 177167191 177167352 -73520502 + L2 LINE L2 2697 2856 -458 187 292 21 0 chr2 177167590 177167638 -73520216 + L2 LINE L2 447 495 -2819 208 276 216 0 chr2 177168514 177168630 -73519224 - MIR SINE MIR -10 252 112 239 264 226 0 chr2 177168657 177168763 -73519091 + MIR SINE MIR 49 178 -84 2018 143 7 0 chr2 177168863 177169157 -73518697 - AluSx SINE Alu -16 296 1 24 32 0 0 chr2 177169365 177169396 -73518458 + AT_rich Low_complexity Low_complexity 1 31 0 666 269 141 84 chr2 177169460 177169794 -73518060 - MLT1G LTR MaLR 0 590 243 322 244 189 0 chr2 177169860 177169950 -73517904 - MLT1G LTR MaLR -488 107 1 2209 111 3 0 chr2 177171367 177171665 -73516189 + AluSq SINE Alu 1 299 -14 27 29 0 0 chr2 177172082 177172116 -73515738 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 177172241 177172262 -73515592 + AT_rich Low_complexity Low_complexity 1 21 0 242 319 53 0 chr2 177173546 177173640 -73514214 + MIR SINE MIR 33 131 -77 191 279 131 0 chr2 177173843 177173904 -73513950 - L2 LINE L2 -1 3312 3244 1262 195 12 111 chr2 177174328 177174733 -73513121 - MLT1A1 LTR MaLR 0 365 1 322 268 87 87 chr2 177175249 177175480 -73512374 + L2 LINE L2 2195 2425 -889 358 289 41 0 chr2 177175588 177175709 -73512145 + MIR SINE MIR 99 224 -38 1005 194 122 93 chr2 177175711 177176087 -73511767 - MSTD LTR MaLR -9 387 1 29 47 0 0 chr2 177176098 177176141 -73511713 + AT_rich Low_complexity Low_complexity 1 43 0 276 350 42 17 chr2 177176291 177176411 -73511443 - L2 LINE L2 -1 3312 3190 1652 164 4 7 chr2 177177274 177177543 -73510311 + AluJo SINE Alu 1 268 -44 480 59 0 0 chr2 177177545 177177613 -73510241 + (TC)n Simple_repeat Simple_repeat 2 69 0 239 164 16 0 chr2 177177612 177177673 -73510181 + (TA)n Simple_repeat Simple_repeat 1 62 0 * 353 369 92 37 chr2 177178050 177178375 -73509479 + L2 LINE L2 2929 3271 -1 312 346 37 15 chr2 177178376 177178512 -73509342 - L2 LINE L2 -8 3305 3167 180 152 0 0 chr2 177179348 177179381 -73508473 + (TA)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr2 177179637 177179658 -73508196 + AT_rich Low_complexity Low_complexity 1 21 0 7991 186 19 21 chr2 177180132 177182774 -73505080 - L1PB4 LINE L1 -9 6863 4226 198 0 0 0 chr2 177182774 177182796 -73505058 + (T)n Simple_repeat Simple_repeat 1 22 0 4984 273 28 19 chr2 177182986 177184778 -73503076 - L1PB4 LINE L1 -5219 1644 3 3074 131 16 0 chr2 177185266 177185770 -73502084 + L1MA5 LINE L1 5787 6298 -2 330 320 162 13 chr2 177185880 177186114 -73501740 - L1MC4 LINE L1 -80 7962 7694 24 32 0 0 chr2 177187275 177187306 -73500548 + AT_rich Low_complexity Low_complexity 1 31 0 3164 80 18 5 chr2 177187687 177188129 -73499725 + L1PA7 LINE L1 5709 6154 0 22 0 0 0 chr2 177189191 177189213 -73498641 + AT_rich Low_complexity Low_complexity 1 22 0 199 301 97 62 chr2 177189522 177189635 -73498219 - L2 LINE L2 -25 3288 3172 1392 277 64 46 chr2 177190777 177191322 -73496532 - MLT1H1 LTR MaLR 0 555 1 900 284 84 13 chr2 177192534 177192945 -73494909 - MLT1J2 LTR MaLR 0 450 3 1806 135 10 40 chr2 177193168 177193471 -73494383 + AluJb SINE Alu 1 294 -18 185 250 42 0 chr2 177193487 177193535 -73494319 - MIR SINE MIR -100 108 59 197 268 54 0 chr2 177194345 177194401 -73493453 - MER5A DNA MER1_type -30 159 101 545 300 157 4 chr2 177195301 177195568 -73492286 + MER102b DNA MER1_type 1 308 -33 627 332 71 45 chr2 177195930 177196397 -73491457 + L3 LINE CR1 842 1320 -257 2127 114 0 29 chr2 177196542 177196849 -73491005 + AluSq SINE Alu 1 298 -15 35 71 0 0 chr2 177197152 177197222 -73490632 + AT_rich Low_complexity Low_complexity 1 70 0 2010 142 131 8 chr2 177197671 177198052 -73489802 + MSTA LTR MaLR 1 428 0 374 75 75 0 chr2 177198128 177198221 -73489633 + (TA)n Simple_repeat Simple_repeat 1 100 0 1706 228 65 26 chr2 177198221 177198716 -73489138 - LTR40a LTR ERVL -4 515 2 520 308 32 0 chr2 177199122 177199278 -73488576 - MIR SINE MIR -16 246 86 23 0 0 0 chr2 177199654 177199677 -73488177 + AT_rich Low_complexity Low_complexity 1 23 0 244 274 0 0 chr2 177199807 177199858 -73487996 + MIR SINE MIR 15 65 -197 440 296 37 0 chr2 177199993 177200128 -73487726 + MIR SINE MIR 122 261 -1 720 323 152 37 chr2 177200206 177201023 -73486831 + L3 LINE CR1 666 1576 -1 361 235 30 182 chr2 177201118 177201382 -73486472 + L3 LINE CR1 1349 1572 -5 1331 221 51 71 chr2 177201907 177201992 -73485862 - MLT1C LTR MaLR -20 447 362 2192 115 3 16 chr2 177201992 177202304 -73485550 + AluSc SINE Alu 1 308 -1 1331 221 51 71 chr2 177202304 177202653 -73485201 - MLT1C LTR MaLR -105 362 22 1037 227 16 128 chr2 177202707 177202854 -73485000 + MLT1A2 LTR MaLR 34 196 -178 2283 70 0 3 chr2 177202854 177203161 -73484693 + AluSp SINE Alu 2 307 0 1037 227 16 128 chr2 177203161 177203246 -73484608 + MLT1A2 LTR MaLR 196 210 -164 1723 186 0 3 chr2 177203246 177203537 -73484317 + AluJb SINE Alu 17 306 -6 1037 227 16 128 chr2 177203537 177203686 -73484168 + MLT1A2 LTR MaLR 210 374 0 2983 212 57 6 chr2 177203687 177204352 -73483502 + MLT1A2-int LTR MaLR 2 700 -1035 235 239 0 42 chr2 177204371 177204442 -73483412 + MLT1A2-int LTR MaLR 820 887 -484 356 309 0 0 chr2 177204501 177204598 -73483256 + MLT-int LTR MaLR 680 776 -959 2150 214 2 7 chr2 177204719 177205131 -73482723 + MLT1A2-int LTR MaLR 1320 1729 -6 1525 225 38 24 chr2 177205136 177205505 -73482349 + MLT1A2 LTR MaLR 1 374 0 1983 174 20 5 chr2 177205568 177205964 -73481890 - L1MB3 LINE L1 -1 6680 6279 1081 171 35 0 chr2 177206068 177206267 -73481587 - MER2 DNA MER2_type -139 206 1 675 154 10 5 chr2 177206267 177206397 -73481457 - L1P5 LINE L1 -368 5783 5656 324 287 59 45 chr2 177206550 177206752 -73481102 - L1MB3 LINE L1 -336 6283 6079 321 207 14 103 chr2 177207485 177207630 -73480224 - Charlie8 DNA MER1_type -2213 204 73 839 249 118 7 chr2 177209481 177209778 -73478076 - L1MB7 LINE L1 -8 6176 5847 3019 210 82 7 chr2 177209781 177210375 -73477479 - L1MB3 LINE L1 -609 6073 5373 345 47 0 0 chr2 177210375 177210418 -73477436 + (TG)n Simple_repeat Simple_repeat 1 43 0 3019 210 82 7 chr2 177210418 177210835 -73477019 - L1MB3 LINE L1 -1309 5373 4988 234 164 18 0 chr2 177210841 177210896 -73476958 - L1MB3 LINE L1 -2217 4427 4372 209 81 0 27 chr2 177210902 177210939 -73476915 + (TTA)n Simple_repeat Simple_repeat 1 36 0 10599 202 7 14 chr2 177210957 177213612 -73474242 - L1PA13 LINE L1 -19 6144 3515 192 40 0 0 chr2 177213612 177213637 -73474217 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 10599 202 7 14 chr2 177213637 177214139 -73473715 - L1PA13 LINE L1 -2648 3515 3011 1706 109 0 0 chr2 177214515 177214745 -73473109 - AluSg/x SINE Alu 0 310 81 1091 194 31 0 chr2 177214797 177215055 -73472799 - L1MB3 LINE L1 -3102 3542 3277 6050 111 9 9 chr2 177215060 177215976 -73471878 - L1MA2 LINE L1 -1 6303 5388 1591 261 85 45 chr2 177215993 177217224 -73470630 - L1MB3 LINE L1 -3372 3272 2048 6189 80 9 11 chr2 177217246 177218105 -73469749 - L1PA8A LINE L1 -6 6125 5268 4782 235 74 27 chr2 177218104 177219865 -73467989 - L1MB3 LINE L1 -4747 1899 16 * 2059 109 66 9 chr2 177220195 177220513 -73467341 + L1MA2 LINE L1 5938 6279 -25 273 29 0 0 chr2 177220513 177220547 -73467307 + (TA)n Simple_repeat Simple_repeat 2 35 0 2059 109 66 9 chr2 177220547 177220575 -73467279 + L1MA2 LINE L1 6279 6304 0 2363 87 0 0 chr2 177220990 177221290 -73466564 + AluY SINE Alu 1 300 -11 232 296 0 68 chr2 177221613 177221645 -73466209 + MIR SINE MIR 20 53 -209 563 318 138 14 chr2 177221645 177222007 -73465847 + MLT1I LTR MaLR 1 407 -2 232 296 0 68 chr2 177222007 177222062 -73465792 + MIR SINE MIR 53 101 -161 1361 326 114 41 chr2 177223041 177223186 -73464668 - L2 LINE L2 -1 3312 3179 2461 67 7 0 chr2 177223186 177223485 -73464369 + AluY SINE Alu 1 301 -10 1361 326 114 41 chr2 177223485 177225149 -73462705 - L2 LINE L2 -134 3179 1376 329 355 58 14 chr2 177225161 177225299 -73462555 + L2 LINE L2 3129 3272 0 699 226 25 102 chr2 177225764 177225999 -73461855 - MER20 DNA MER1_type -1 218 2 362 360 60 10 chr2 177226290 177226490 -73461364 + L3 LINE CR1 1309 1518 -59 7414 132 28 25 chr2 177226664 177227428 -73460426 + HSMAR2 DNA Mariner 2 772 -530 2502 62 0 0 chr2 177227428 177227736 -73460118 + AluY SINE Alu 1 308 -3 7414 132 28 25 chr2 177227736 177228265 -73459589 + HSMAR2 DNA Mariner 772 1298 -4 2534 65 0 0 chr2 177228540 177228849 -73459005 - AluY SINE Alu 0 311 3 788 195 36 0 chr2 177229183 177229378 -73458476 + MER69 DNA AcHobo 2324 2525 -1 222 411 104 28 chr2 177231193 177231548 -73456306 + L2 LINE L2 2872 3253 -19 348 247 0 21 chr2 177231637 177231734 -73456120 + (CA)n Simple_repeat Simple_repeat 2 96 0 230 207 122 0 chr2 177231741 177231823 -73456031 - L1MC4 LINE L1 -1337 6705 6614 493 180 48 122 chr2 177232342 177232531 -73455323 + MER69A DNA AcHobo 1 175 -2 1978 221 47 7 chr2 177232969 177233399 -73454455 + LTR40b LTR ERVL 16 462 0 319 302 85 38 chr2 177233508 177233742 -73454112 + L1ME LINE L1 5398 5662 -459 205 167 0 0 chr2 177233753 177233789 -73454065 + CT-rich Low_complexity Low_complexity 2 37 0 * 208 244 0 0 chr2 177233788 177233829 -73454025 + (TATG)n Simple_repeat Simple_repeat 2 42 0 497 291 7 14 chr2 177234188 177234329 -73453525 + MIR SINE MIR 29 168 -94 202 266 62 47 chr2 177235345 177235409 -73452445 + L2 LINE L2 3210 3274 -39 611 316 113 0 chr2 177236117 177236329 -73451525 + MIR SINE MIR 4 239 -23 2064 137 0 25 chr2 177236664 177236985 -73450869 + AluSq SINE Alu 1 313 0 525 58 35 12 chr2 177236989 177237075 -73450779 + (GAAA)n Simple_repeat Simple_repeat 1 88 0 2571 95 3 0 chr2 177237594 177237953 -73449901 - L1PB1 LINE L1 -1 6150 5791 288 94 16 31 chr2 177237963 177238027 -73449827 + (TA)n Simple_repeat Simple_repeat 2 64 0 198 0 0 0 chr2 177238191 177238213 -73449641 + (TA)n Simple_repeat Simple_repeat 2 23 0 1385 78 0 0 chr2 177238213 177238393 -73449461 - L1PB1 LINE L1 -371 5780 5601 472 95 16 8 chr2 177238394 177238498 -73449356 - L1PA8A LINE L1 -694 5437 5326 24 0 0 0 chr2 177238515 177238539 -73449315 + AT_rich Low_complexity Low_complexity 1 24 0 1862 147 0 14 chr2 177238771 177239057 -73448797 + AluSx SINE Alu 1 282 -30 200 343 55 48 chr2 177239546 177239692 -73448162 + MIR SINE MIR 38 184 -78 208 210 32 0 chr2 177240969 177241031 -73446823 + (TATAA)n Simple_repeat Simple_repeat 5 68 0 1850 165 24 42 chr2 177241038 177241420 -73446434 + THE1C LTR MaLR 1 375 0 44 35 0 0 chr2 177242163 177242221 -73445633 + AT_rich Low_complexity Low_complexity 1 58 0 1193 109 24 66 chr2 177242318 177242375 -73445479 + L1P4 LINE L1 5335 5393 -772 2640 45 0 0 chr2 177242375 177242686 -73445168 + AluY SINE Alu 1 311 0 1193 109 24 66 chr2 177242686 177242839 -73445015 + L1P4 LINE L1 5393 5536 -629 191 77 0 0 chr2 177242994 177243020 -73444834 + (T)n Simple_repeat Simple_repeat 1 26 0 4574 228 39 14 chr2 177243030 177244301 -73443553 - L1 LINE L1 -2640 4568 3266 4122 242 12 7 chr2 177244299 177244316 -73443538 - L1 LINE L1 -4778 2431 2416 * 6629 74 9 0 chr2 177244316 177245754 -73442100 - L1PA7 LINE L1 -3 6151 4697 4122 242 12 7 chr2 177245754 177246715 -73441139 - L1 LINE L1 -4793 2416 1448 300 368 9 0 chr2 177247171 177247285 -73440569 - L1 LINE L1 -6064 1145 1031 645 316 69 4 chr2 177247844 177248245 -73439609 - L1 LINE L1 -6595 614 20 1747 161 7 4 chr2 177248990 177249264 -73438590 - AluSx SINE Alu -17 295 21 22 35 0 0 chr2 177249367 177249396 -73438458 + AT_rich Low_complexity Low_complexity 1 29 0 648 332 52 34 chr2 177249438 177249824 -73438030 + L1MCc LINE L1 23 415 -6008 229 335 104 42 chr2 177249831 177250186 -73437668 + L1MCc LINE L1 833 1209 -5214 491 259 30 78 chr2 177250246 177250516 -73437338 + L1MCc LINE L1 1196 1452 -4971 629 195 64 59 chr2 177250531 177250767 -73437087 + L1MCc LINE L1 3057 3293 -3648 204 40 0 0 chr2 177250767 177250792 -73437062 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 1965 98 56 25 chr2 177250863 177251149 -73436705 + AluSx SINE Alu 1 295 -17 2190 285 90 44 chr2 177251181 177251397 -73436457 + L1MCc LINE L1 3431 3636 -3305 35 0 0 0 chr2 177251397 177251432 -73436422 + AT_rich Low_complexity Low_complexity 1 35 0 2190 285 90 44 chr2 177251432 177251941 -73435913 + L1MCc LINE L1 3636 4120 -2821 3766 91 9 15 chr2 177251941 177252479 -73435375 - L1PA13 LINE L1 -7 6156 5622 2190 285 90 44 chr2 177252479 177253820 -73434034 + L1MCc LINE L1 4120 5628 -1313 492 277 19 0 chr2 177253817 177253976 -73433878 + L1ME2 LINE L1 6001 6162 -2 * 391 231 178 72 chr2 177256017 177256281 -73431573 - HAL1 LINE L1 -1391 1116 825 4028 148 44 4 chr2 177259131 177259852 -73428002 - Tigger3(Golem) DNA MER2_type -3 3026 2277 512 262 0 0 chr2 177259848 177259951 -73427903 - Tigger3(Golem) DNA MER2_type -2926 103 1 * 6339 128 19 11 chr2 177260120 177261248 -73426606 - L1MA3 LINE L1 -1 6304 5157 2307 93 68 0 chr2 177261264 177261618 -73426236 - L1PA13 LINE L1 0 6163 5786 3848 89 15 21 chr2 177261618 177262232 -73425622 + L1PA13 LINE L1 5199 5809 -354 1420 200 7 0 chr2 177262222 177262502 -73425352 - L1MA5A LINE L1 -971 5175 4894 * 5615 146 35 20 chr2 177262491 177263593 -73424261 + L1MA5A LINE L1 5177 6293 -4 24 0 0 0 chr2 177263594 177263618 -73424236 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr2 177263707 177263733 -73424121 + AT_rich Low_complexity Low_complexity 1 26 0 217 282 26 64 chr2 177263858 177263936 -73423918 - L2 LINE L2 -260 3053 2979 737 251 49 65 chr2 177265296 177265353 -73422501 - MIR SINE MIR -3 259 203 2394 158 29 21 chr2 177265353 177265772 -73422082 + MSTB LTR MaLR 1 422 -4 737 251 49 65 chr2 177265772 177265977 -73421877 - MIR SINE MIR -59 203 1 193 313 43 55 chr2 177267809 177267972 -73419882 - L2 LINE L2 -21 3292 3132 * 524 353 83 8 chr2 177267942 177268208 -73419646 - L3 LINE CR1 -44 1533 1248 310 235 20 41 chr2 177270076 177270174 -73417680 + MER103 DNA DNA 3 98 -68 2487 162 14 29 chr2 177270620 177271065 -73416789 + MLT1C LTR MaLR 29 466 -1 933 321 74 16 chr2 177272268 177272648 -73415206 + MLT1K LTR MaLR 18 419 -169 256 225 225 20 chr2 177272688 177272839 -73415015 + LTR33 LTR ERVL 30 211 -310 356 316 82 24 chr2 177272870 177273076 -73414778 + LTR33 LTR ERVL 304 521 0 628 177 0 15 chr2 177273076 177273206 -73414648 + MLT1K LTR MaLR 461 588 0 356 275 36 51 chr2 177274523 177274661 -73413193 + MLT1J2 LTR MaLR 273 408 -42 620 283 21 79 chr2 177275367 177275399 -73412455 - MIR SINE MIR -34 228 196 1395 159 4 17 chr2 177275399 177275638 -73412216 + MER46A DNA MER2_type 1 236 0 620 283 21 79 chr2 177275638 177275845 -73412009 - MIR SINE MIR -66 196 3 923 303 70 25 chr2 177276813 177277431 -73410423 + L2 LINE L2 2633 3313 0 461 239 130 7 chr2 177277550 177277688 -73410166 - L2 LINE L2 0 3313 3159 2348 89 0 0 chr2 177277695 177277986 -73409868 - AluSc SINE Alu -18 291 1 600 256 218 11 chr2 177278304 177278729 -73409125 - L2 LINE L2 -254 3059 2556 6467 55 2 0 chr2 177278985 177279792 -73408062 - L1PA5 LINE L1 -6 6148 5340 38595 74 26 3 chr2 177279892 177285575 -73402279 - L1P2 LINE L1 -333 5821 3 196 250 0 69 chr2 177286290 177286362 -73401492 - MIR SINE MIR -77 185 119 1036 252 114 22 chr2 177287057 177287374 -73400480 + L2 LINE L2 2456 2801 -513 883 111 2 44 chr2 177287509 177287672 -73400182 - L1MA8 LINE L1 -2 6289 6151 284 196 0 0 chr2 177287677 177287728 -73400126 + MER91 DNA MER1_type 139 189 -1 1051 39 0 0 chr2 177290020 177290149 -73397705 + L1PA5 LINE L1 6015 6143 -11 279 0 0 0 chr2 177290150 177290181 -73397673 + (TA)n Simple_repeat Simple_repeat 2 32 0 417 293 54 45 chr2 177290328 177290550 -73397304 + HAL1b LINE L1 64 287 -1061 295 273 91 26 chr2 177290551 177290705 -73397149 - MER110 LTR ERV1 -6 485 322 257 313 68 65 chr2 177291060 177291396 -73396458 + HAL1b LINE L1 344 680 -668 222 37 0 0 chr2 177292884 177292911 -73394943 + (CA)n Simple_repeat Simple_repeat 2 28 0 334 270 109 15 chr2 177293672 177293809 -73394045 + MLT2E LTR ERVL 25 174 -454 331 321 89 22 chr2 177293800 177294071 -73393783 + MLT2E LTR ERVL 336 624 -4 * 36 0 0 0 chr2 177294392 177294428 -73393426 + AT_rich Low_complexity Low_complexity 1 36 0 242 350 98 7 chr2 177294756 177294899 -73392955 + MIR SINE MIR 101 256 -6 365 229 136 0 chr2 177294902 177295020 -73392834 + MIR SINE MIR 92 225 -37 1239 222 103 22 chr2 177295308 177295668 -73392186 + MLT2C1 LTR ERVL 1 389 -8 378 0 0 0 chr2 177296607 177296649 -73391205 + (TC)n Simple_repeat Simple_repeat 2 43 0 1873 199 12 9 chr2 177296658 177297004 -73390850 + MLT1A1 LTR MaLR 19 365 0 215 231 0 19 chr2 177297015 177297067 -73390787 + CT-rich Low_complexity Low_complexity 3 53 0 495 257 7 27 chr2 177297479 177297627 -73390227 + LTR67 LTR ERVL 408 552 -5 1334 127 18 5 chr2 177299017 177299237 -73388617 + L1P LINE L1 4569 4791 -1355 2132 166 35 26 chr2 177299692 177300119 -73387735 + MSTB1 LTR MaLR 2 432 0 345 376 54 0 chr2 177301353 177301558 -73386296 - MIR SINE MIR 0 262 47 22 0 0 0 chr2 177301958 177301980 -73385874 + AT_rich Low_complexity Low_complexity 1 22 0 413 361 55 34 chr2 177302053 177302380 -73385474 + HAL1b LINE L1 354 687 -661 2112 218 23 25 chr2 177302458 177302940 -73384914 - MLT1D LTR MaLR 0 505 25 25 0 0 0 chr2 177303014 177303039 -73384815 + AT_rich Low_complexity Low_complexity 1 25 0 246 215 31 0 chr2 177303532 177303597 -73384257 + (TA)n Simple_repeat Simple_repeat 1 67 0 613 247 6 32 chr2 177304426 177304584 -73383270 - MER58B DNA MER1_type 0 341 188 720 263 144 52 chr2 177304942 177305311 -73382543 + MLT1J2 LTR MaLR 1 403 -47 22 56 0 0 chr2 177305392 177305428 -73382426 + AT_rich Low_complexity Low_complexity 1 36 0 358 337 61 65 chr2 177305747 177306041 -73381813 + HAL1b LINE L1 391 683 -665 608 322 11 88 chr2 177306150 177306526 -73381328 + LTR16B LTR ERVL 34 380 -84 27 29 0 0 chr2 177306602 177306636 -73381218 + AT_rich Low_complexity Low_complexity 1 34 0 2430 233 21 0 chr2 177306636 177307195 -73380659 + L1MA10 LINE L1 4775 5345 -801 1977 184 59 2 chr2 177307185 177307610 -73380244 + L1MA10 LINE L1 5764 6212 -122 * 203 98 78 0 chr2 177307610 177307661 -73380193 + (TA)n Simple_repeat Simple_repeat 1 55 0 666 160 16 0 chr2 177307661 177307786 -73380068 + L1MA10 LINE L1 6198 6324 -10 26 0 0 0 chr2 177307815 177307841 -73380013 + AT_rich Low_complexity Low_complexity 1 26 0 8296 200 22 51 chr2 177307995 177310844 -73377010 + L1P3 LINE L1 13 2951 -3510 5943 101 31 7 chr2 177310850 177311778 -73376076 + L1PA10 LINE L1 5219 6168 0 715 297 62 35 chr2 177312529 177312980 -73374874 + LTR16B LTR ERVL 2 464 0 228 215 113 65 chr2 177313137 177313323 -73374531 + L1M4 LINE L1 2983 3177 -2969 22 35 0 0 chr2 177313438 177313467 -73374387 + AT_rich Low_complexity Low_complexity 1 29 0 576 150 9 18 chr2 177313652 177313765 -73374089 - L1MA7 LINE L1 0 6291 6180 286 314 29 0 chr2 177314115 177314217 -73373637 - MER94 DNA DNA 0 134 30 1502 189 18 7 chr2 177314219 177314504 -73373350 + AluJb SINE Alu 3 290 -22 942 331 70 15 chr2 177314523 177315066 -73372788 + L1MCc LINE L1 27 599 -5824 2341 254 40 11 chr2 177315189 177315949 -73371905 + L1MCc LINE L1 784 1565 -4857 1668 246 40 83 chr2 177315946 177315993 -73371861 + L1MCc LINE L1 2341 2388 -4734 * 225 65 0 0 chr2 177315993 177316024 -73371830 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1668 246 40 83 chr2 177316024 177316683 -73371171 + L1MCc LINE L1 2388 3000 -4122 1606 227 78 61 chr2 177316683 177317225 -73370629 - MLT2B3 LTR ERVL 0 554 4 1668 246 40 83 chr2 177317225 177317457 -73370397 + L1MCc LINE L1 3000 3240 -3882 679 234 38 4 chr2 177317457 177317648 -73370206 + L1ME1 LINE L1 5980 6184 0 1337 210 0 62 chr2 177317868 177318177 -73369677 - AluJb SINE Alu -21 291 2 22 0 0 0 chr2 177318343 177318365 -73369489 + AT_rich Low_complexity Low_complexity 1 22 0 244 273 200 27 chr2 177319263 177319373 -73368481 - L2 LINE L2 0 3313 3185 274 239 155 0 chr2 177319400 177319471 -73368383 + FLAM_A SINE Alu 29 110 -23 543 311 114 17 chr2 177319544 177319892 -73367962 - L2 LINE L2 -193 3120 2750 220 306 0 0 chr2 177321219 177321268 -73366586 + L2 LINE L2 451 499 -2815 348 283 155 41 chr2 177321268 177321558 -73366296 + L2 LINE L2 760 1082 -2232 346 373 35 20 chr2 177321597 177321852 -73366002 + L2 LINE L2 1233 1491 -1823 448 294 49 12 chr2 177321963 177322126 -73365728 + MIR SINE MIR 94 262 0 342 259 254 5 chr2 177322169 177322362 -73365492 + L2 LINE L2 1629 1869 -1445 315 358 115 12 chr2 177322406 177322649 -73365205 + L2 LINE L2 2521 2788 -526 348 234 78 42 chr2 177322744 177322911 -73364943 - L1ME4a LINE L1 -206 5915 5743 3370 167 30 36 chr2 177324332 177325058 -73362796 + L1MB7 LINE L1 5447 6168 -16 189 74 0 0 chr2 177325312 177325339 -73362515 + (TC)n Simple_repeat Simple_repeat 2 28 0 24 0 0 0 chr2 177327744 177327768 -73360086 + AT_rich Low_complexity Low_complexity 1 24 0 368 247 27 32 chr2 177328349 177328555 -73359299 - L1ME4a LINE L1 -685 5477 5272 333 315 116 55 chr2 177328571 177329094 -73358760 - L1ME4a LINE L1 -953 5193 4615 280 312 51 65 chr2 177329162 177329576 -73358278 - HAL1 LINE L1 -931 1576 1169 636 304 101 9 chr2 177330540 177330757 -73357097 - MIR SINE MIR 0 262 26 195 125 0 0 chr2 177330886 177330926 -73356928 + (T)n Simple_repeat Simple_repeat 1 40 0 729 252 69 9 chr2 177332943 177333161 -73354693 - MIR SINE MIR -24 238 8 463 248 17 0 chr2 177333441 177333558 -73354296 + MER103 DNA DNA 2 120 -46 505 43 0 29 chr2 177334161 177334231 -73353623 + L1P LINE L1 2499 2566 -3580 799 182 123 11 chr2 177334696 177334883 -73352971 - MER3 DNA MER1_type 0 209 2 374 316 15 15 chr2 177335931 177336064 -73351790 - MIR3 SINE MIR -1 207 75 774 291 39 20 chr2 177336237 177336491 -73351363 - MIR SINE MIR -3 259 1 188 311 39 29 chr2 177337163 177337266 -73350588 + L2 LINE L2 3181 3284 -29 2917 6 0 0 chr2 177337896 177338212 -73349642 - AluYb8 SINE Alu -2 316 1 241 299 115 11 chr2 177338350 177338437 -73349417 - MER5A DNA MER1_type -85 104 9 40719 65 9 2 chr2 177338466 177344564 -73343290 - L1PA5 LINE L1 0 6154 11 21 82 0 0 chr2 177344601 177344650 -73343204 + AT_rich Low_complexity Low_complexity 1 49 0 207 259 0 0 chr2 177345735 177345793 -73342061 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 330 283 60 30 chr2 177345966 177346132 -73341722 - L1ME LINE L1 -478 5643 5473 22 0 0 0 chr2 177346132 177346154 -73341700 + AT_rich Low_complexity Low_complexity 1 22 0 215 241 0 0 chr2 177346234 177346288 -73341566 + T-rich Low_complexity Low_complexity 1 54 0 243 114 0 0 chr2 177346859 177346903 -73340951 + (T)n Simple_repeat Simple_repeat 1 44 0 1154 278 110 54 chr2 177347972 177348123 -73339731 - MLT1E LTR MaLR -122 471 330 1886 174 10 0 chr2 177348123 177348427 -73339427 - AluJo SINE Alu -5 307 1 1154 278 110 54 chr2 177348427 177348721 -73339133 - MLT1E LTR MaLR -263 330 1 485 271 71 36 chr2 177348724 177348812 -73339042 - LTR16C LTR ERVL -120 371 275 2340 121 30 24 chr2 177348812 177349185 -73338669 + THE1C LTR MaLR 1 375 0 485 271 71 36 chr2 177349185 177349236 -73338618 - LTR16C LTR ERVL -216 275 227 1618 188 70 6 chr2 177349319 177349633 -73338221 - MLT2C1 LTR ERVL -52 345 12 1565 237 54 18 chr2 177349633 177350080 -73337774 - MLT1C LTR MaLR -4 463 1 366 227 64 106 chr2 177350092 177350233 -73337621 - LTR16C LTR ERVL -259 232 98 23 0 0 0 chr2 177350529 177350552 -73337302 + AT_rich Low_complexity Low_complexity 1 23 0 2079 174 85 16 chr2 177350920 177351357 -73336497 - MLT1C LTR MaLR 0 467 1 195 129 0 0 chr2 177351380 177351411 -73336443 + (T)n Simple_repeat Simple_repeat 1 31 0 183 80 0 0 chr2 177352282 177352307 -73335547 + (A)n Simple_repeat Simple_repeat 1 25 0 198 338 71 45 chr2 177352657 177352811 -73335043 - MIR3 SINE MIR -48 160 3 704 277 34 50 chr2 177353616 177353876 -73333978 + MIR SINE MIR 4 261 -1 420 292 303 0 chr2 177354200 177354385 -73333469 - MIR SINE MIR -4 258 18 307 238 131 0 chr2 177354395 177354479 -73333375 - L2 LINE L2 0 3313 3219 1294 145 69 53 chr2 177354539 177354857 -73332997 - MER33 DNA MER1_type 0 324 2 293 227 52 41 chr2 177354930 177355027 -73332827 - L2 LINE L2 -426 2888 2791 24 0 0 0 chr2 177355919 177355943 -73331911 + AT_rich Low_complexity Low_complexity 1 24 0 505 281 181 0 chr2 177357812 177358022 -73329832 - MIR SINE MIR -14 248 1 261 282 35 0 chr2 177358155 177358240 -73329614 + MIR SINE MIR 119 206 -56 210 114 23 23 chr2 177360095 177360139 -73327715 + A-rich Low_complexity Low_complexity 5 48 0 29 0 0 0 chr2 177361805 177361834 -73326020 + AT_rich Low_complexity Low_complexity 1 29 0 191 371 42 18 chr2 177361861 177362028 -73325826 + MIR SINE MIR 33 203 -59 265 393 92 0 chr2 177362105 177362301 -73325553 + L3 LINE CR1 293 506 -1071 798 284 8 39 chr2 177362410 177362667 -73325187 + MIR SINE MIR 1 249 -13 236 162 29 44 chr2 177363046 177363114 -73324740 + CT-rich Low_complexity Low_complexity 2 68 0 28 0 0 0 chr2 177363683 177363711 -73324143 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 177363859 177363887 -73323967 + AT_rich Low_complexity Low_complexity 1 28 0 248 273 173 9 chr2 177365315 177365425 -73322429 - LTR16C LTR ERVL -50 441 314 288 336 37 19 chr2 177365707 177365814 -73322040 - L2 LINE L2 -1 3312 3204 1982 160 25 19 chr2 177365859 177366222 -73321632 - MLT1A1 LTR MaLR 0 365 1 348 380 8 0 chr2 177366260 177366389 -73321465 + L2 LINE L2 3141 3270 -2 426 353 201 15 chr2 177366546 177366889 -73320965 + L3 LINE CR1 1115 1521 -56 352 364 7 19 chr2 177367060 177367254 -73320600 - MIR SINE MIR -62 146 2 470 380 98 8 chr2 177368760 177369147 -73318707 + L2 LINE L2 2544 2965 -349 347 288 59 8 chr2 177369317 177369435 -73318419 + L2 LINE L2 3180 3303 -10 1524 300 52 73 chr2 177369570 177369968 -73317886 + HAL1 LINE L1 94 499 -2008 601 41 0 0 chr2 177369968 177370041 -73317813 + MADE1 DNA Mariner 4 76 -4 1524 300 52 73 chr2 177370041 177370921 -73316933 + HAL1 LINE L1 499 1345 -1162 1812 174 0 0 chr2 177371350 177371649 -73316205 + AluSq SINE Alu 1 299 -14 961 285 81 11 chr2 177371740 177372087 -73315767 + HAL1 LINE L1 1473 1843 -664 242 330 0 0 chr2 177372196 177372308 -73315546 + HAL1 LINE L1 2041 2152 -355 791 268 70 20 chr2 177372353 177372655 -73315199 + L1MC4a LINE L1 5584 5900 -1908 252 0 0 0 chr2 177373144 177373172 -73314682 + (TG)n Simple_repeat Simple_repeat 1 28 0 * 315 0 0 0 chr2 177373171 177373206 -73314648 + (GA)n Simple_repeat Simple_repeat 1 35 0 849 130 0 15 chr2 177373226 177373389 -73314465 + AluSg/x SINE Alu 175 310 0 746 280 49 9 chr2 177373781 177374006 -73313848 - MIR SINE MIR -24 238 5 1990 128 56 69 chr2 177375542 177375859 -73311995 + MLT1B LTR MaLR 1 314 -76 6891 25 25 1 chr2 177375859 177376690 -73311164 + L1PA4 LINE L1 5302 6152 -3 1990 128 56 69 chr2 177376690 177376762 -73311092 + MLT1B LTR MaLR 314 385 -5 256 284 0 10 chr2 177377259 177377361 -73310493 + L1MC/D LINE L1 5131 5231 -915 206 324 56 0 chr2 177377462 177377533 -73310321 - L2 LINE L2 -55 3217 3143 467 343 136 55 chr2 177379833 177380545 -73307309 + L2 LINE L2 1217 1870 -1402 2375 156 36 108 chr2 177380545 177380583 -73307271 - MLT2B2 LTR ERVL 0 515 476 444 37 0 0 chr2 177380583 177380637 -73307217 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 2375 156 36 108 chr2 177380637 177381151 -73306703 - MLT2B2 LTR ERVL -39 476 3 467 343 136 55 chr2 177381151 177382342 -73305512 + L2 LINE L2 1870 3272 0 1893 166 28 53 chr2 177382358 177382756 -73305098 + MLT1B LTR MaLR 1 388 -2 1006 122 0 0 chr2 177383076 177383235 -73304619 + AluSp SINE Alu 145 303 0 372 252 90 58 chr2 177383312 177383467 -73304387 - MLT1I LTR MaLR -249 160 1 341 254 142 35 chr2 177383822 177383991 -73303863 - L2 LINE L2 -8 3305 3119 1593 231 45 7 chr2 177384037 177384457 -73303397 - Zaphod DNA AcHobo -1 4030 3595 2818 229 39 57 chr2 177384461 177385347 -73302507 - Zaphod DNA AcHobo -3089 942 73 261 0 0 0 chr2 177385347 177385376 -73302478 + (TG)n Simple_repeat Simple_repeat 2 30 0 2818 229 39 57 chr2 177385376 177385440 -73302414 - Zaphod DNA AcHobo -3958 73 9 361 330 88 33 chr2 177385948 177386221 -73301633 + L1MC4a LINE L1 5637 5924 -1884 320 251 82 50 chr2 177386532 177386751 -73301103 - L1M4 LINE L1 -2155 3991 3766 514 258 71 57 chr2 177386758 177387211 -73300643 - L1M4 LINE L1 -2429 3717 3259 * 621 240 100 26 chr2 177387210 177387589 -73300265 - L1MC5 LINE L1 -11 7950 7544 504 266 196 29 chr2 177387586 177387932 -73299922 + L1MC/D LINE L1 5313 5716 -2092 * 19491 168 53 15 chr2 177387963 177389269 -73298585 + L1MA2 LINE L1 22 1277 -6288 189 0 0 0 chr2 177389269 177389290 -73298564 + (TGG)n Simple_repeat Simple_repeat 1 21 0 19491 168 53 15 chr2 177389290 177391094 -73296760 + L1MA2 LINE L1 1277 3011 -4554 333 0 0 0 chr2 177391094 177391131 -73296723 + (TG)n Simple_repeat Simple_repeat 2 38 0 2145 89 4 0 chr2 177391131 177391412 -73296442 - AluY SINE Alu -29 282 1 19491 168 53 15 chr2 177391412 177393194 -73294660 + L1MA2 LINE L1 3010 5101 -2464 4574 46 0 0 chr2 177393185 177393748 -73294106 - L1PA3 LINE L1 -1171 4975 4413 * 7542 25 0 0 chr2 177393748 177394920 -73292934 + L1PA3 LINE L1 5001 6155 0 8095 169 24 10 chr2 177394922 177397527 -73290327 + L1MA2 LINE L1 5083 7723 0 1495 189 60 67 chr2 177397592 177398009 -73289845 - LTR52 LTR ERVL -7 414 1 1539 184 0 7 chr2 177398858 177399157 -73288697 - L1MA7 LINE L1 -7 6284 5988 244 286 0 0 chr2 177400838 177400894 -73286960 + CT-rich Low_complexity Low_complexity 5 60 0 1931 93 0 0 chr2 177402303 177402551 -73285303 - AluSq SINE Alu -11 302 55 849 58 0 0 chr2 177402551 177402654 -73285200 - AluSp SINE Alu -210 103 1 217 217 365 9 chr2 177405707 177405822 -73282032 + L2 LINE L2 3155 3310 -3 320 0 25 0 chr2 177406959 177406999 -73280855 + (TTTTG)n Simple_repeat Simple_repeat 5 45 0 247 396 50 10 chr2 177408309 177408511 -73279343 + L2 LINE L2 2872 3081 -191 1945 58 0 0 chr2 177411857 177412099 -73275755 - L1PA7 LINE L1 -4 6150 5909 253 303 40 0 chr2 177412696 177412772 -73275082 + MIR SINE MIR 74 152 -56 249 276 72 88 chr2 177414880 177415061 -73272793 + MER5B DNA MER1_type 1 178 0 604 200 124 55 chr2 177415515 177415660 -73272194 - MER5A DNA MER1_type 0 189 35 214 125 0 42 chr2 177415798 177415846 -73272008 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 5646 169 13 77 chr2 177417517 177418255 -73269599 + L1PA16 LINE L1 3976 4760 -1406 2158 122 0 10 chr2 177418255 177418559 -73269295 - AluSx SINE Alu -11 301 1 5646 169 13 77 chr2 177418559 177418923 -73268931 + L1PA16 LINE L1 4760 5146 -1020 400 75 0 0 chr2 177418923 177418976 -73268878 + Alu SINE Alu 1 53 -257 232 239 0 0 chr2 177418980 177419026 -73268828 + Alu SINE Alu 242 287 -13 5646 169 13 77 chr2 177419026 177420177 -73267677 + L1PA16 LINE L1 5149 6162 -4 304 103 59 73 chr2 177420295 177420363 -73267491 + MER53 DNA DNA 123 189 0 736 254 6 22 chr2 177420388 177420569 -73267285 + MER5B DNA MER1_type 1 178 0 287 104 21 0 chr2 177420827 177420875 -73266979 + (TG)n Simple_repeat Simple_repeat 2 50 0 22 35 0 0 chr2 177421801 177421830 -73266024 + AT_rich Low_complexity Low_complexity 1 29 0 533 317 58 41 chr2 177423044 177423287 -73264567 - MIR SINE MIR -4 258 12 5266 130 5 16 chr2 177423553 177424972 -73262882 - L1PA16 LINE L1 -3 6163 4739 336 145 16 0 chr2 177425232 177425294 -73262560 + MADE1 DNA Mariner 18 80 0 718 264 122 5 chr2 177425444 177425641 -73262213 - MIR SINE MIR -10 252 33 30 27 0 0 chr2 177426841 177426878 -73260976 + AT_rich Low_complexity Low_complexity 1 37 0 258 213 85 0 chr2 177426936 177427015 -73260839 - MIR SINE MIR -68 140 62 299 361 25 25 chr2 177427420 177427539 -73260315 - L2 LINE L2 -193 3079 2961 234 296 74 37 chr2 177427564 177427645 -73260209 - L2 LINE L2 -55 3217 3134 490 93 23 0 chr2 177427839 177427925 -73259929 + (GA)n Simple_repeat Simple_repeat 1 88 0 444 298 152 13 chr2 177428999 177429157 -73258697 - MER5A DNA MER1_type -6 183 4 256 248 8 107 chr2 177431974 177432095 -73255759 - MER103 DNA DNA -1 165 57 295 330 68 0 chr2 177432580 177432698 -73255156 + LTR16A LTR ERVL 2 127 -323 397 279 20 41 chr2 177432830 177432977 -73254877 + LTR16B LTR ERVL 319 462 -2 187 344 44 11 chr2 177433419 177433509 -73254345 - L2 LINE L2 -612 2702 2610 510 209 0 33 chr2 177434109 177434200 -73253654 + MER58A DNA MER1_type 2 89 -18 408 129 16 0 chr2 177434187 177434249 -73253605 + MER58A DNA MER1_type 156 218 -6 * 556 282 13 75 chr2 177434302 177434529 -73253325 - MER58C DNA MER1_type -1 214 2 2880 150 15 6 chr2 177434536 177435055 -73252799 - L1MA3 LINE L1 0 6305 5782 2650 42 29 3 chr2 177435149 177435532 -73252322 - MER11A LTR ERVK -777 489 1 597 352 45 4 chr2 177435721 177435968 -73251886 - MIR SINE MIR -3 259 3 222 325 158 9 chr2 177436716 177436830 -73251024 - MIR SINE MIR -25 237 107 800 173 39 142 chr2 177436907 177437317 -73250537 - LTR37B LTR ERV1 0 468 101 401 270 18 0 chr2 177437328 177437439 -73250415 + MER81 DNA DNA 2 114 0 283 164 137 14 chr2 177437439 177437512 -73250342 - LTR37B LTR ERV1 -386 82 1 22 56 0 0 chr2 177439907 177439943 -73247911 + AT_rich Low_complexity Low_complexity 1 36 0 443 87 14 0 chr2 177440375 177440444 -73247410 + (CA)n Simple_repeat Simple_repeat 1 70 0 466 295 31 0 chr2 177441262 177441391 -73246463 + MIR SINE MIR 29 161 -101 357 125 0 0 chr2 177443452 177443508 -73244346 + (TTCC)n Simple_repeat Simple_repeat 1 56 0 312 27 0 0 chr2 177443713 177443750 -73244104 + (TG)n Simple_repeat Simple_repeat 2 38 0 3407 144 46 31 chr2 177444050 177444847 -73243007 + pTR5 LTR ERV1 742 2025 -413 240 265 31 20 chr2 177444847 177444945 -73242909 + LTR30 LTR ERV1 544 642 -80 2390 97 0 0 chr2 177444945 177445276 -73242578 + pTR5 LTR ERV1 66 396 -2042 1665 133 63 4 chr2 177445729 177446000 -73241854 + AluSq SINE Alu 1 287 -26 1619 164 104 9 chr2 177448950 177449267 -73238587 - MER7A DNA MER2_type 0 346 2 198 382 0 0 chr2 177449426 177449494 -73238360 - L2 LINE L2 -22 3250 3183 1240 144 21 45 chr2 177450830 177451073 -73236781 - THE1A LTR MaLR 0 355 119 1938 158 134 3 chr2 177451134 177451521 -73236333 - L1M2 LINE L1 -480 5811 5374 8224 178 112 21 chr2 177451521 177453130 -73234724 - MER52A LTR ERV1 0 1755 1 2414 175 25 88 chr2 177453145 177453840 -73234014 - L1P LINE L1 -767 5389 4738 203 133 62 26 chr2 177453867 177453980 -73233874 + (TA)n Simple_repeat Simple_repeat 2 118 0 580 98 85 0 chr2 177454006 177454170 -73233684 + (TA)n Simple_repeat Simple_repeat 1 178 0 536 97 70 11 chr2 177454207 177454609 -73233245 + (TA)n Simple_repeat Simple_repeat 1 425 0 229 234 0 43 chr2 177454627 177454721 -73233133 - L1MC4 LINE L1 -1339 6703 6614 334 124 57 19 chr2 177454721 177454826 -73233028 + (TA)n Simple_repeat Simple_repeat 2 110 0 188 234 11 11 chr2 177454806 177454981 -73232873 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 * 488 93 80 7 chr2 177454962 177455113 -73232741 + (TA)n Simple_repeat Simple_repeat 1 162 0 5742 214 47 12 chr2 177455113 177456064 -73231790 - L1 LINE L1 -1404 4742 3826 2008 124 3 3 chr2 177456064 177456369 -73231485 - AluSg SINE Alu 0 305 1 5742 214 47 12 chr2 177456369 177457714 -73230140 - L1 LINE L1 -2320 3826 2189 802 260 73 24 chr2 177459169 177459415 -73228439 + MIR SINE MIR 1 258 -4 477 320 0 8 chr2 177460206 177460328 -73227526 - MIR SINE MIR -64 144 24 1477 178 22 12 chr2 177461193 177461513 -73226341 - MER33 DNA MER1_type -1 323 1 260 277 67 105 chr2 177462183 177462421 -73225433 - L2 LINE L2 -514 2800 2572 429 325 63 19 chr2 177462697 177462903 -73224951 - MIR SINE MIR -47 215 1 26 30 0 0 chr2 177463207 177463240 -73224614 + AT_rich Low_complexity Low_complexity 1 33 0 29 0 0 0 chr2 177463479 177463508 -73224346 + AT_rich Low_complexity Low_complexity 1 29 0 6699 167 30 10 chr2 177463736 177464426 -73223428 - L1PA13 LINE L1 -3 6160 5486 2447 72 0 3 chr2 177464426 177464730 -73223124 - AluY SINE Alu -8 303 1 6699 167 30 10 chr2 177464730 177466183 -73221671 - L1PA13 LINE L1 -677 5486 4019 3402 176 14 12 chr2 177466183 177466326 -73221528 + L1P LINE L1 3363 3504 -2642 1915 113 128 21 chr2 177466326 177466655 -73221199 + THE1B LTR MaLR 1 364 0 3402 176 14 12 chr2 177466655 177467169 -73220685 + L1P LINE L1 3504 4021 -2125 355 225 7 130 chr2 177468109 177468247 -73219607 - L2 LINE L2 -1 3312 3192 769 349 59 15 chr2 177468282 177468672 -73219182 - MLT1I LTR MaLR 0 409 3 2154 133 33 30 chr2 177468967 177469328 -73218526 + THE1B LTR MaLR 3 364 0 690 226 32 39 chr2 177469520 177469675 -73218179 + FRAM SINE Alu 2 155 -11 299 265 153 9 chr2 177471670 177471852 -73216002 + MER58C DNA MER1_type 1 213 -2 281 216 80 34 chr2 177473015 177473135 -73214719 - MLT1J2 LTR MaLR -281 128 18 2022 122 14 17 chr2 177474103 177474398 -73213456 + AluSg SINE Alu 1 294 -16 589 253 83 66 chr2 177474603 177474844 -73213010 + Charlie8 DNA MER1_type 4 248 -2169 662 268 107 49 chr2 177475284 177475650 -73212204 - MLT1K LTR MaLR -18 570 184 426 302 6 31 chr2 177475801 177475960 -73211894 - MER5A DNA MER1_type -33 156 2 692 261 39 8 chr2 177476002 177476197 -73211657 - MIR SINE MIR -28 234 37 3984 94 4 0 chr2 177478307 177478859 -73208995 - MER41A LTR ERV1 0 554 1 2024 244 116 14 chr2 177478969 177479505 -73208349 + MER77 LTR ERV1 40 601 -4 283 302 79 29 chr2 177479790 177479929 -73207925 - MIR SINE MIR -1 261 116 848 293 114 43 chr2 177480003 177480519 -73207335 + L2 LINE L2 1737 2289 -1025 736 270 162 39 chr2 177480928 177481336 -73206518 + L2 LINE L2 2852 3309 -4 183 350 0 33 chr2 177481356 177481416 -73206438 - MIR SINE MIR -197 65 8 196 323 266 0 chr2 177481479 177481603 -73206251 - L2 LINE L2 -217 3055 2899 2217 115 0 0 chr2 177482779 177483083 -73204771 + AluSc SINE Alu 1 304 -5 560 208 28 0 chr2 177483936 177484042 -73203812 - Tigger3(Golem) DNA MER2_type -1 3028 2920 833 232 78 96 chr2 177484050 177484486 -73203368 + MSTC LTR MaLR 1 428 0 7681 206 57 29 chr2 177484492 177486169 -73201685 + MLT1A1-int LTR MaLR 8 1730 -5 922 246 49 61 chr2 177486177 177486594 -73201260 + MLT1A1 LTR MaLR 1 363 -2 215 356 106 53 chr2 177486731 177486995 -73200859 + L2 LINE L2 2968 3245 -27 25 0 0 0 chr2 177488643 177488668 -73199186 + AT_rich Low_complexity Low_complexity 1 25 0 2520 139 44 2 chr2 177488757 177489168 -73198686 + MSTB1 LTR MaLR 5 432 0 741 178 22 44 chr2 177489509 177489689 -73198165 + LTR41 LTR ERVL 9 184 -589 250 375 31 0 chr2 177489768 177489864 -73197990 + LTR41 LTR ERVL 342 440 -333 507 189 79 100 chr2 177489897 177490087 -73197767 + LTR41 LTR ERVL 583 768 -5 931 60 15 8 chr2 177490104 177490237 -73197617 - AluY SINE Alu 0 311 178 307 312 101 1 chr2 177490240 177490374 -73197480 - MIR SINE MIR -63 145 36 258 275 12 0 chr2 177490400 177490480 -73197374 - MER94 DNA DNA -52 82 2 374 221 26 13 chr2 177490566 177490643 -73197211 - MER21B LTR ERV1 -767 96 19 * 422 280 25 0 chr2 177490617 177490735 -73197119 - MER21B LTR ERV1 -731 132 12 526 156 9 46 chr2 177491081 177491190 -73196664 + MER31A LTR ERV1 353 457 -28 30 0 0 0 chr2 177491210 177491240 -73196614 + AT_rich Low_complexity Low_complexity 1 30 0 1905 138 17 10 chr2 177492933 177493223 -73194631 - AluSx SINE Alu -20 292 1 1380 308 77 45 chr2 177494456 177494665 -73193189 + L2 LINE L2 2149 2350 -964 1694 184 7 20 chr2 177494665 177494970 -73192884 - AluJo SINE Alu -11 301 1 1380 308 77 45 chr2 177494970 177495474 -73192380 + L2 LINE L2 2350 2885 -429 4871 163 27 11 chr2 177495632 177497046 -73190808 - L1M2 LINE L1 -473 5818 4385 775 183 0 7 chr2 177497147 177497289 -73190565 - THE1C-int LTR MaLR -1437 143 3 1811 169 49 27 chr2 177497291 177497658 -73190196 - THE1C LTR MaLR 0 375 1 6497 192 52 57 chr2 177497854 177499287 -73188567 + L1M1 LINE L1 3316 4755 -2810 640 100 0 10 chr2 177499287 177499387 -73188467 + L1PB1 LINE L1 6048 6146 -5 6497 192 52 57 chr2 177499387 177499407 -73188447 + L1M1 LINE L1 4755 4774 -2791 1848 117 60 8 chr2 177499407 177499709 -73188145 + AluSg SINE Alu 1 316 0 6497 192 52 57 chr2 177499709 177500343 -73187511 + L1M1 LINE L1 4774 5391 -2174 635 291 112 37 chr2 177500515 177500811 -73187043 + L2 LINE L2 2461 2778 -536 497 321 47 19 chr2 177500810 177501022 -73186832 + L2 LINE L2 3002 3219 -94 * 5487 150 23 6 chr2 177501087 177502203 -73185651 - L1PA16 LINE L1 -2 6164 5034 832 260 91 0 chr2 177502498 177502706 -73185148 + MIR SINE MIR 5 231 -31 5995 214 12 42 chr2 177502923 177502979 -73184875 - L1 LINE L1 -1102 5044 4988 1628 173 51 7 chr2 177502979 177503274 -73184580 - AluJb SINE Alu -4 308 1 5995 214 12 42 chr2 177503274 177504804 -73183050 - L1 LINE L1 -1158 4988 3506 941 175 57 0 chr2 177504939 177505167 -73182687 + L1MA8 LINE L1 6044 6284 -7 34 79 0 0 chr2 177506288 177506364 -73181490 + AT_rich Low_complexity Low_complexity 1 76 0 1247 166 21 115 chr2 177506514 177506887 -73180967 - MER58B DNA MER1_type -3 338 1 912 268 213 16 chr2 177507435 177507928 -73179926 + MLT1G LTR MaLR 1 590 0 637 268 64 32 chr2 177507961 177508181 -73179673 + MIR SINE MIR 32 258 -4 764 219 100 0 chr2 177508201 177508361 -73179493 + MER45A DNA AcHobo 1 176 -2 800 217 94 5 chr2 177508523 177508913 -73178941 - MLT1F LTR MaLR -80 487 3 504 302 40 7 chr2 177509352 177509501 -73178353 + MIR SINE MIR 37 190 -72 183 366 105 17 chr2 177510273 177510445 -73177409 - L2 LINE L2 -147 3125 2939 475 241 78 7 chr2 177510870 177511011 -73176843 + MIR SINE MIR 4 154 -108 1544 227 132 20 chr2 177511024 177511519 -73176335 - MER39 LTR ERV1 0 707 6 217 274 55 0 chr2 177511523 177511596 -73176258 + MIR SINE MIR 186 262 0 218 216 189 0 chr2 177511873 177511947 -73175907 - MIR SINE MIR -12 250 163 2910 136 11 13 chr2 177511966 177512438 -73175416 - L1PB3 LINE L1 -2 6152 5682 463 322 106 24 chr2 177512625 177513051 -73174803 + L1MC/D LINE L1 4160 4620 -1526 22 35 0 0 chr2 177513286 177513315 -73174539 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 177513450 177513475 -73174379 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 177513496 177513524 -73174330 + AT_rich Low_complexity Low_complexity 1 28 0 2228 141 73 15 chr2 177514090 177514501 -73173353 - MLT1C LTR MaLR -32 435 1 465 262 83 18 chr2 177514637 177514805 -73173049 + L1MC/D LINE L1 5582 5760 -2048 1312 122 0 5 chr2 177515452 177515648 -73172206 + AluJb SINE Alu 85 279 -33 1850 135 7 4 chr2 177516520 177516836 -73171018 + AluSx SINE Alu 1 317 0 266 314 66 29 chr2 177516976 177517113 -73170741 - MIR SINE MIR -38 224 83 261 0 0 0 chr2 177517221 177517250 -73170604 + (TG)n Simple_repeat Simple_repeat 1 29 0 229 350 43 29 chr2 177518018 177518158 -73169696 + MIR SINE MIR 13 154 -108 450 242 114 34 chr2 177518467 177518616 -73169238 - MIR SINE MIR -21 241 81 23 56 4 0 chr2 177518790 177518871 -73168983 + AT_rich Low_complexity Low_complexity 1 51 0 211 229 0 43 chr2 177518986 177519056 -73168798 + (TA)n Simple_repeat Simple_repeat 2 68 0 296 318 100 43 chr2 177519092 177519372 -73168482 - L1MC4a LINE L1 -1906 5902 5607 1549 192 44 10 chr2 177519619 177519916 -73167938 + AluJo SINE Alu 6 312 0 391 233 25 75 chr2 177520043 177520110 -73167744 - MER5A DNA MER1_type -75 114 54 1929 152 75 6 chr2 177520110 177520459 -73167395 - THE1C LTR MaLR 0 375 3 391 233 25 75 chr2 177520459 177520511 -73167343 - MER5A DNA MER1_type -135 54 1 529 290 54 8 chr2 177520790 177521085 -73166769 + LTR33 LTR ERVL 1 344 -177 676 309 69 9 chr2 177521264 177521632 -73166222 + MLT1K LTR MaLR 80 488 -100 663 267 11 6 chr2 177523243 177523419 -73164435 - MER5B DNA MER1_type -1 177 1 451 304 68 29 chr2 177524477 177524684 -73163170 - MIR SINE MIR -19 243 29 493 252 8 8 chr2 177525229 177525348 -73162506 - L2 LINE L2 0 3313 3195 369 265 143 14 chr2 177526568 177526715 -73161139 + LTR33 LTR ERVL 1 166 -355 272 263 101 10 chr2 177526795 177526894 -73160960 + LTR33 LTR ERVL 272 379 -142 700 307 113 19 chr2 177527095 177527518 -73160336 + MLT1L LTR MaLR 143 605 -10 2219 107 0 7 chr2 177527609 177527909 -73159945 + AluSc SINE Alu 1 298 -11 1390 211 18 65 chr2 177528137 177528520 -73159334 - MLT1A1 LTR MaLR 0 365 1 333 0 0 0 chr2 177528856 177528893 -73158961 + (TTA)n Simple_repeat Simple_repeat 3 39 0 4466 56 5 0 chr2 177528893 177529450 -73158404 - L1PA7 LINE L1 -18 6136 5577 4166 74 3 2 chr2 177529450 177530018 -73157836 + L1P LINE L1 4530 5098 -1048 199 355 116 8 chr2 177531725 177531846 -73156008 + L2 LINE L2 3180 3313 0 265 313 79 0 chr2 177531861 177531991 -73155863 - MIR SINE MIR -15 193 44 626 292 89 35 chr2 177532249 177532662 -73155192 - L2 LINE L2 -263 3009 2574 239 352 67 29 chr2 177533052 177533157 -73154697 + L2 LINE L2 3116 3224 -48 653 225 0 84 chr2 177533829 177533883 -73153971 - MIR SINE MIR -2 260 203 1970 122 42 0 chr2 177533883 177534169 -73153685 - AluSq SINE Alu -13 300 3 653 225 0 84 chr2 177534169 177534305 -73153549 - MIR SINE MIR -59 203 86 207 0 0 0 chr2 177535236 177535259 -73152595 + (A)n Simple_repeat Simple_repeat 1 23 0 1706 189 45 3 chr2 177535492 177535826 -73152028 + MER7A DNA MER2_type 1 346 0 2902 154 15 44 chr2 177536094 177536612 -73151242 - Tigger1 DNA MER2_type 0 2418 1916 * 9384 140 26 36 chr2 177536610 177538256 -73149598 - Tigger1 DNA MER2_type -788 1630 1 338 42 21 0 chr2 177538422 177538470 -73149384 + (TG)n Simple_repeat Simple_repeat 1 49 0 379 279 57 118 chr2 177540064 177540379 -73147475 - LTR16A1 LTR ERVL 0 457 162 225 0 0 0 chr2 177540486 177540511 -73147343 + (A)n Simple_repeat Simple_repeat 1 25 0 687 312 84 48 chr2 177540619 177541088 -73146766 + L2 LINE L2 83 602 -2712 482 275 119 6 chr2 177541088 177541248 -73146606 - MER5B DNA MER1_type 0 178 1 197 312 78 64 chr2 177541254 177541347 -73146507 + L2 LINE L2 602 699 -2615 1555 248 155 17 chr2 177541347 177542036 -73145818 - MER20B DNA MER1_type 0 784 1 197 312 78 64 chr2 177542036 177542083 -73145771 + L2 LINE L2 699 744 -2570 425 258 17 8 chr2 177542222 177542342 -73145512 - LTR33 LTR ERVL -97 424 304 381 279 96 0 chr2 177542441 177542577 -73145277 - LTR33 LTR ERVL -349 172 24 425 301 9 0 chr2 177542579 177542692 -73145162 - MER81 DNA DNA 0 114 1 444 252 16 39 chr2 177542723 177542850 -73145004 + L2 LINE L2 2102 2225 -1089 180 311 14 27 chr2 177542848 177542922 -73144932 - L2 LINE L2 -691 2623 2551 * 1321 45 0 4 chr2 177542992 177543232 -73144622 + AluY SINE Alu 1 325 0 937 290 113 45 chr2 177543232 177543701 -73144153 + L2 LINE L2 2278 2778 -536 497 321 47 19 chr2 177543700 177543912 -73143942 + L2 LINE L2 3002 3219 -94 * 5414 132 11 21 chr2 177543977 177545092 -73142762 - L1PA16 LINE L1 -3 6163 5034 832 260 91 0 chr2 177545387 177545595 -73142259 + MIR SINE MIR 5 231 -31 3660 201 38 26 chr2 177545812 177545868 -73141986 - L1 LINE L1 -1102 5044 4990 1628 173 51 7 chr2 177545868 177546163 -73141691 - AluJb SINE Alu -4 308 1 3660 201 38 26 chr2 177546163 177546736 -73141118 - L1 LINE L1 -1156 4990 4398 195 69 0 0 chr2 177546736 177546765 -73141089 + (TG)n Simple_repeat Simple_repeat 2 30 0 3660 201 38 26 chr2 177546765 177547034 -73140820 - L1 LINE L1 -1748 4398 4134 6553 117 13 4 chr2 177547250 177548272 -73139582 - L1MA2 LINE L1 0 6304 5274 795 234 0 0 chr2 177548273 177548457 -73139397 - L1MA2 LINE L1 -921 5225 5042 823 228 35 0 chr2 177548492 177548694 -73139160 - L1MA2 LINE L1 -2424 3722 3514 * 14616 162 43 17 chr2 177548685 177549042 -73138812 - L1 LINE L1 -1098 6467 6121 180 0 0 0 chr2 177549042 177549062 -73138792 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 14616 162 43 17 chr2 177549062 177553971 -73133883 - L1 LINE L1 -1444 6121 874 1940 47 0 0 chr2 177554063 177554296 -73133558 - L1PA5 LINE L1 -401 5753 5521 3515 31 0 0 chr2 177554296 177554708 -73133146 + L1PA5 LINE L1 5741 6154 0 210 167 37 19 chr2 177555987 177556041 -73131813 + T-rich Low_complexity Low_complexity 3 57 0 287 366 61 15 chr2 177556487 177556618 -73131236 - MIR3 SINE MIR -40 168 32 402 254 14 87 chr2 177557213 177557351 -73130503 - MER5A DNA MER1_type -22 167 40 192 40 0 0 chr2 177557351 177557376 -73130478 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 1971 33 8 0 chr2 177557377 177557622 -73130232 - L1PA4 LINE L1 -5 6150 5904 544 305 185 26 chr2 177558468 177559015 -73128839 - L1MC4a LINE L1 -1907 5901 5268 278 301 78 21 chr2 177559407 177559742 -73128112 - L1MC4a LINE L1 -1327 4819 4466 278 232 16 119 chr2 177559737 177559790 -73128064 - L1MA10 LINE L1 -2 6332 6280 2648 238 31 16 chr2 177559790 177560497 -73127357 - L1ME1 LINE L1 -25 6141 5424 214 214 18 0 chr2 177560543 177560599 -73127255 + T-rich Low_complexity Low_complexity 2 58 0 1733 114 8 0 chr2 177560691 177560937 -73126917 - L1PA15-16 LINE L1 -4329 2520 2273 269 319 72 48 chr2 177561559 177561725 -73126129 - MER5A DNA MER1_type -16 173 4 30 0 0 0 chr2 177562116 177562146 -73125708 + AT_rich Low_complexity Low_complexity 1 30 0 4997 174 35 19 chr2 177562255 177563603 -73124251 + L1PA16 LINE L1 4801 6165 -1 1193 188 45 11 chr2 177563964 177564251 -73123603 - MER33 DNA MER1_type 0 324 28 834 168 19 14 chr2 177564744 177564932 -73122922 - L1M3 LINE L1 -348 5808 5642 336 338 77 40 chr2 177566369 177566595 -73121259 + MIR SINE MIR 20 255 -7 28 29 0 0 chr2 177566654 177566689 -73121165 + AT_rich Low_complexity Low_complexity 1 35 0 231 317 99 72 chr2 177568300 177568732 -73119122 + LTR67 LTR ERVL 114 557 0 10713 192 35 48 chr2 177569338 177569832 -73118022 - L1MC3 LINE L1 -8 7777 7278 1728 138 84 31 chr2 177569832 177570188 -73117666 + THE1C LTR MaLR 1 375 0 10713 192 35 48 chr2 177570188 177572570 -73115284 - L1MC3 LINE L1 -507 7278 4942 426 115 0 0 chr2 177572585 177572646 -73115208 + AluJb SINE Alu 64 124 -188 589 234 51 0 chr2 177572660 177572797 -73115057 - L1MC/D LINE L1 -795 5618 5475 28 79 0 0 chr2 177572797 177572860 -73114994 + AT_rich Low_complexity Low_complexity 1 63 0 5362 233 46 58 chr2 177572894 177574697 -73113157 - L1MC/D LINE L1 -905 5310 3576 1834 123 4 0 chr2 177574697 177574958 -73112896 - AluSx SINE Alu -50 262 1 5362 233 46 58 chr2 177574958 177575569 -73112285 - L1MC/D LINE L1 -2639 3576 2959 22416 33 0 0 chr2 177575789 177578516 -73109338 - L1PA3 LINE L1 -935 5211 2485 7422 37 0 0 chr2 177578516 177579456 -73108398 + L1PA3 LINE L1 5215 6154 -1 24 67 0 0 chr2 177579499 177579544 -73108310 + AT_rich Low_complexity Low_complexity 1 45 0 26 0 0 0 chr2 177579727 177579753 -73108101 + AT_rich Low_complexity Low_complexity 1 26 0 356 214 14 0 chr2 177579887 177579957 -73107897 - MER110 LTR ERV1 -420 71 1 226 241 37 0 chr2 177580935 177580989 -73106865 - LTR67 LTR ERVL -107 450 395 2741 192 12 12 chr2 177582242 177582753 -73105101 - LTR53 LTR ERVL 0 519 9 255 303 211 40 chr2 177583443 177583618 -73104236 + MIR3 SINE MIR 1 205 -3 474 313 199 0 chr2 177584168 177584379 -73103475 - MIR SINE MIR 0 262 10 642 40 0 0 chr2 177584391 177584467 -73103387 + L1PA4 LINE L1 6064 6139 -16 1144 238 75 56 chr2 177584849 177585579 -73102275 - L1MEc LINE L1 -3468 2747 2020 588 240 165 10 chr2 177585582 177585782 -73102072 - L1MEc LINE L1 -6132 264 34 1745 197 47 49 chr2 177585866 177586333 -73101521 - L1ME3 LINE L1 -8 6154 5689 405 341 83 10 chr2 177586640 177586845 -73101009 - MIR SINE MIR -16 246 27 197 331 56 38 chr2 177587981 177588141 -73099713 + MIR3 SINE MIR 14 176 -32 23 0 0 0 chr2 177588295 177588318 -73099536 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr2 177588501 177588537 -73099317 + AT_rich Low_complexity Low_complexity 1 36 0 513 342 127 22 chr2 177588666 177589069 -73098785 - L2 LINE L2 -16 3297 2853 24 32 0 0 chr2 177589224 177589255 -73098599 + AT_rich Low_complexity Low_complexity 1 31 0 216 254 28 42 chr2 177589670 177589741 -73098113 - MIR3 SINE MIR -6 202 133 246 213 16 16 chr2 177589890 177589951 -73097903 + MER103 DNA DNA 56 116 -50 1943 218 19 75 chr2 177590016 177590603 -73097251 - MLT2B3 LTR ERVL 0 554 1 904 264 45 8 chr2 177590820 177591066 -73096788 - MIR SINE MIR -1 261 7 246 247 212 0 chr2 177591164 177591249 -73096605 - L3 LINE CR1 -283 1294 1192 1734 170 0 7 chr2 177591255 177591574 -73096280 - AluSx SINE Alu 0 319 3 199 271 153 59 chr2 177591574 177591692 -73096162 - L3 LINE CR1 -353 1224 1096 2514 128 38 24 chr2 177591830 177591947 -73095907 + MSTA LTR MaLR 1 115 -313 2379 184 22 67 chr2 177591947 177592527 -73095327 + MLT2B3 LTR ERVL 1 554 0 2514 128 38 24 chr2 177592527 177592831 -73095023 + MSTA LTR MaLR 115 428 0 1359 255 77 14 chr2 177593143 177593601 -73094253 + MLT1D LTR MaLR 5 467 0 542 292 119 47 chr2 177593901 177594393 -73093461 + L2 LINE L2 2719 3289 -24 1400 276 55 51 chr2 177594757 177596004 -73091850 - L1MCa LINE L1 -4326 2796 1326 2074 285 100 53 chr2 177596024 177596817 -73091037 - L1MCa LINE L1 -5130 1293 420 3472 107 12 4 chr2 177596817 177597322 -73090532 + MER9 LTR ERVK 3 511 0 2074 285 100 53 chr2 177597322 177597745 -73090109 - L1MCa LINE L1 -6003 420 19 233 313 12 0 chr2 177598491 177598571 -73089283 - Charlie8 DNA MER1_type -1 2416 2336 1987 137 0 13 chr2 177602671 177602977 -73084877 - AluSx SINE Alu -2 310 9 186 296 19 0 chr2 177603031 177603085 -73084769 - L2 LINE L2 -3 3310 3256 548 325 44 36 chr2 177603120 177603394 -73084460 + Charlie8 DNA MER1_type 1 276 -2141 609 316 158 55 chr2 177603443 177604077 -73083777 - L2 LINE L2 -457 2857 2159 570 351 64 17 chr2 177604223 177604568 -73083286 + L1MEd LINE L1 389 749 -5370 891 236 102 38 chr2 177604643 177605015 -73082839 + L1MEd LINE L1 866 1299 -4870 3193 233 31 7 chr2 177605209 177605909 -73081945 + L1MA2 LINE L1 22 738 -6827 * 11791 174 28 22 chr2 177605903 177610760 -73077094 + L1MA2 LINE L1 2844 7722 -1 201 214 36 18 chr2 177611016 177611072 -73076782 + GA-rich Low_complexity Low_complexity 2 58 0 443 276 16 16 chr2 177611356 177611483 -73076371 - FLAM_A SINE Alu -2 131 5 1790 149 71 9 chr2 177612858 177613181 -73074673 + MER61A LTR ERV1 1 343 0 2467 190 50 38 chr2 177613181 177613830 -73074024 + MER61A-int LTR ERV1 1 738 -4479 * 23963 105 50 14 chr2 177613827 177617211 -73070643 + MER61A-int LTR ERV1 1320 4901 -316 328 20 41 0 chr2 177617211 177617260 -73070594 + (TTTG)n Simple_repeat Simple_repeat 1 51 0 23963 105 50 14 chr2 177617260 177617590 -73070264 + MER61A-int LTR ERV1 4901 5217 0 1877 122 78 9 chr2 177617590 177617911 -73069943 + MER61A LTR ERV1 1 343 0 21 0 0 0 chr2 177621325 177621346 -73066508 + AT_rich Low_complexity Low_complexity 1 21 0 1708 182 0 7 chr2 177621462 177621753 -73066101 + AluJb SINE Alu 12 300 -12 192 125 0 0 chr2 177622371 177622403 -73065451 + (CA)n Simple_repeat Simple_repeat 2 33 0 751 265 40 18 chr2 177622760 177623003 -73064851 - L1ME1 LINE L1 -98 6332 6088 1485 231 51 34 chr2 177623023 177623517 -73064337 - L1ME1 LINE L1 -964 5442 4941 746 246 30 50 chr2 177623524 177623821 -73064033 - L1ME1 LINE L1 -5181 1228 938 2290 138 25 3 chr2 177624717 177625073 -73062781 - THE1B LTR MaLR 0 364 1 1737 141 128 26 chr2 177625396 177625702 -73062152 - MER1B DNA MER1_type 0 337 1 1416 348 68 24 chr2 177625752 177627264 -73060590 + ERVL LTR ERVL 3584 5122 -363 282 332 52 62 chr2 177627816 177628105 -73059749 + LTR16C LTR ERVL 204 489 -2 438 292 37 6 chr2 177628279 177628440 -73059414 - MER103 DNA DNA 0 166 1 282 284 12 0 chr2 177628799 177628880 -73058974 + MIR SINE MIR 172 253 -9 210 267 17 17 chr2 177629002 177629062 -73058792 + MER5B DNA MER1_type 87 146 -32 987 115 0 143 chr2 177630218 177630427 -73057427 - AluSg/x SINE Alu -8 304 126 12683 210 32 21 chr2 177630427 177634883 -73052971 - L1P5 LINE L1 -698 5513 1011 4232 150 9 5 chr2 177634888 177635549 -73052305 - L1P5 LINE L1 -5369 835 172 216 200 0 33 chr2 177635806 177635866 -73051988 + (TATATG)n Simple_repeat Simple_repeat 1 58 0 2498 48 3 0 chr2 177637500 177637793 -73050061 - AluY SINE Alu -17 294 1 42 0 0 0 chr2 177637824 177637866 -73049988 + AT_rich Low_complexity Low_complexity 1 42 0 7431 41 1 0 chr2 177637866 177639388 -73048466 - L1PA3 LINE L1 0 6155 4633 1094 23 0 0 chr2 177639388 177639516 -73048338 + L1P LINE L1 4355 4482 -1664 458 200 0 24 chr2 177639648 177639733 -73048121 + MER5A DNA MER1_type 107 189 0 217 349 0 0 chr2 177639748 177639834 -73048020 + L2 LINE L2 1875 1960 -1354 227 162 0 0 chr2 177642666 177642703 -73045151 + L2 LINE L2 3276 3312 -1 196 245 0 19 chr2 177643217 177643270 -73044584 - L2 LINE L2 0 3313 3262 198 295 74 11 chr2 177643337 177643432 -73044422 + L2 LINE L2 3177 3277 -36 685 194 0 0 chr2 177643480 177643609 -73044245 + FLAM_C SINE Alu 15 143 0 276 185 0 0 chr2 177643609 177643663 -73044191 + GA-rich Low_complexity Low_complexity 1 54 0 1892 89 41 4 chr2 177643667 177643938 -73043916 - MLT2A1 LTR ERVL -8 436 156 5114 126 6 14 chr2 177643939 177644725 -73043129 - LTR17 LTR ERV1 0 780 1 2290 75 0 3 chr2 177644725 177645018 -73042836 - HERV17 LTR ERV1 0 8626 8335 515 59 0 0 chr2 177645011 177645079 -73042775 - HERV17 LTR ERV1 -1081 7545 7478 * 17348 62 2 9 chr2 177645067 177645821 -73042033 - HERV17 LTR ERV1 -4048 4578 3820 4792 56 2 0 chr2 177645821 177646407 -73041447 - LTR14C LTR ERVK 0 587 1 17348 62 2 9 chr2 177646407 177647816 -73040038 - HERV17 LTR ERV1 -4806 3820 2430 9038 56 3 19 chr2 177647801 177648580 -73039274 - HERV17 LTR ERV1 -6612 2014 1257 * 6962 64 7 0 chr2 177648580 177650134 -73037720 - L1PA5 LINE L1 0 6154 4592 9038 56 3 19 chr2 177650134 177650500 -73037354 - HERV17 LTR ERV1 -7369 1257 887 2094 116 13 19 chr2 177650495 177650813 -73037041 - HERV17 LTR ERV1 -8309 317 2 * 4985 125 24 9 chr2 177650815 177651582 -73036272 - LTR17 LTR ERV1 -2 778 1 1180 71 0 0 chr2 177651582 177651736 -73036118 - MLT2A1 LTR ERVL -286 158 5 765 93 14 22 chr2 177651737 177651876 -73035978 + (GAAA)n Simple_repeat Simple_repeat 1 138 0 1094 293 65 71 chr2 177653955 177654587 -73033267 + MLT2E LTR ERVL 1 628 0 1589 284 39 37 chr2 177654604 177655147 -73032707 + ERVL-E LTR ERVL 2011 2554 -3210 5019 297 79 30 chr2 177655183 177656273 -73031581 + ERVL-E LTR ERVL 2648 3683 -2081 1755 114 0 8 chr2 177656273 177656519 -73031335 + AluSg SINE Alu 59 302 -8 5019 297 79 30 chr2 177656519 177657562 -73030292 + ERVL-E LTR ERVL 3683 4922 -842 7453 152 17 53 chr2 177657563 177658899 -73028955 - THE1C-int LTR MaLR -292 1288 1 2710 108 11 0 chr2 177658899 177659270 -73028584 - THE1C LTR MaLR 0 375 1 1071 231 54 7 chr2 177659291 177659568 -73028286 + ERVL-E LTR ERVL 5166 5455 -309 394 267 99 8 chr2 177659832 177659963 -73027891 + ERVL-E LTR ERVL 5613 5755 -9 1132 299 103 35 chr2 177659996 177660568 -73027286 + MLT2E LTR ERVL 18 628 0 261 0 0 0 chr2 177661369 177661398 -73026456 + (A)n Simple_repeat Simple_repeat 1 29 0 455 260 180 25 chr2 177662048 177662248 -73025606 - MIR SINE MIR -28 234 4 1024 177 11 0 chr2 177663735 177663921 -73023933 - L1PA15 LINE L1 0 6165 5978 1050 249 30 0 chr2 177663924 177664193 -73023661 + ERVL LTR ERVL 5166 5442 -322 9926 222 92 18 chr2 177664197 177667555 -73020299 - L1PA15 LINE L1 -201 5964 2328 2020 149 0 0 chr2 177667555 177667850 -73020004 + AluSx SINE Alu 1 295 -17 9926 222 92 18 chr2 177667850 177667998 -73019856 - L1PA15 LINE L1 -3837 2328 2192 2375 161 27 5 chr2 177668116 177668525 -73019329 + MER47B DNA MER2_type 1 418 0 26 0 0 0 chr2 177668769 177668795 -73019059 + AT_rich Low_complexity Low_complexity 1 26 0 1528 182 55 7 chr2 177668795 177669070 -73018784 + AluJb SINE Alu 3 290 -22 2211 112 3 10 chr2 177669310 177669613 -73018241 + AluSq SINE Alu 1 301 -12 182 250 23 0 chr2 177669918 177669962 -73017892 - L2 LINE L2 -8 3305 3261 517 291 50 5 chr2 177671122 177671321 -73016533 + MER3 DNA MER1_type 1 208 -1 303 290 0 0 chr2 177672233 177672302 -73015552 + L2 LINE L2 3238 3306 -7 3749 241 116 25 chr2 177672462 177673442 -73014412 + L1MDa LINE L1 1 1070 -5470 3017 232 45 10 chr2 177673425 177674291 -73013563 + L1M4 LINE L1 3232 4127 -2019 * 3787 185 59 20 chr2 177674290 177675124 -73012730 + L1P LINE L1 4495 5360 -786 244 234 290 9 chr2 177675143 177675250 -73012604 + L3 LINE CR1 1392 1528 -49 476 236 6 96 chr2 177675326 177675504 -73012350 - Charlie8 DNA MER1_type -2212 205 44 441 0 0 0 chr2 177676677 177676726 -73011128 + (CA)n Simple_repeat Simple_repeat 2 50 0 740 319 85 43 chr2 177677623 177678296 -73009558 + L2 LINE L2 2598 3309 -4 468 305 45 7 chr2 177678949 177679103 -73008751 + LTR16A LTR ERVL 14 173 -277 311 266 113 23 chr2 177679151 177679328 -73008526 + LTR16A LTR ERVL 258 450 0 36 0 0 0 chr2 177679608 177679644 -73008210 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr2 177681835 177681864 -73005990 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr2 177682053 177682090 -73005764 + AT_rich Low_complexity Low_complexity 1 37 0 246 373 62 62 chr2 177682462 177682832 -73005022 - L2 LINE L2 -2 3270 2901 2417 69 0 7 chr2 177683469 177683772 -73004082 - AluY SINE Alu -10 301 1 1546 192 62 3 chr2 177683772 177684111 -73003743 - MER46B DNA MER2_type -1 235 2 737 251 62 10 chr2 177684119 177684314 -73003540 - MIR SINE MIR -1 261 57 898 267 145 38 chr2 177686079 177686600 -73001254 - MLT1H1 LTR MaLR -8 547 1 404 338 92 72 chr2 177687659 177688008 -72999846 - L2 LINE L2 0 3272 2917 312 221 0 0 chr2 177738284 177738397 -72949457 + G-rich Low_complexity Low_complexity 1 113 0 286 266 0 0 chr2 177738825 177738889 -72948965 + MIR SINE MIR 196 259 -3 239 247 0 45 chr2 177740547 177740659 -72947195 + GA-rich Low_complexity Low_complexity 1 106 0 1936 116 14 3 chr2 177740717 177741009 -72946845 + AluSq SINE Alu 3 297 -16 2028 114 0 10 chr2 177741340 177741654 -72946200 + AluSx SINE Alu 1 311 0 294 29 0 0 chr2 177741893 177741928 -72945926 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 82 0 0 chr2 177741971 177742020 -72945834 + AT_rich Low_complexity Low_complexity 1 49 0 8233 111 65 8 chr2 177742749 177744062 -72943792 - Tigger4(Zombi) DNA MER2_type -144 2587 1200 1690 238 78 65 chr2 177744070 177744983 -72942871 + L1ME3A LINE L1 2836 3765 -2381 2205 78 0 0 chr2 177744983 177745265 -72942589 + AluY SINE Alu 1 282 -29 1690 238 78 65 chr2 177745265 177745349 -72942505 + L1ME3A LINE L1 3765 3846 -2300 872 169 48 11 chr2 177745349 177745538 -72942316 + L1PA15 LINE L1 4836 5031 -1115 1539 146 11 7 chr2 177745648 177745923 -72941931 + L1PA14 LINE L1 5886 6161 0 1813 254 81 84 chr2 177745993 177746530 -72941324 + L1ME3A LINE L1 3972 4509 -1637 2153 93 0 10 chr2 177746530 177746831 -72941023 + AluY SINE Alu 1 298 -13 1813 254 81 84 chr2 177746831 177747728 -72940126 + L1ME3A LINE L1 4509 5401 -745 * 10913 199 66 20 chr2 177747719 177750404 -72937450 - L1PA15 LINE L1 -1009 5137 2329 5598 119 49 4 chr2 177750407 177751372 -72936482 + L1PA15 LINE L1 5153 6159 -6 1105 242 124 20 chr2 177751373 177751864 -72935990 + L1ME3A LINE L1 5384 6073 -97 1330 175 44 46 chr2 177751869 177752197 -72935657 + MLT1A1 LTR MaLR 20 365 0 267 261 72 0 chr2 177752861 177752930 -72934924 + MER2 DNA MER2_type 271 344 -1 389 181 28 0 chr2 177753928 177754000 -72933854 + MLT1B LTR MaLR 3 76 -314 3848 129 116 10 chr2 177754001 177754714 -72933140 - Tigger3(Golem) DNA MER2_type 0 3029 2241 1173 277 3 27 chr2 177754927 177755256 -72932598 + MER21-int LTR ERV1 95 415 -3776 916 217 71 0 chr2 177755268 177755480 -72932374 + MER21-int LTR ERV1 3486 3712 -3046 597 327 27 35 chr2 177755481 177755738 -72932116 + MER21-int LTR ERV1 2899 3153 -1038 33 43 0 0 chr2 177756331 177756378 -72931476 + AT_rich Low_complexity Low_complexity 1 47 0 235 309 0 24 chr2 177756635 177756719 -72931135 + CT-rich Low_complexity Low_complexity 3 84 0 785 76 68 0 chr2 177756730 177756848 -72931006 - L1PA5 LINE L1 -7 6147 6022 1236 219 52 43 chr2 177757366 177757695 -72930159 - MLT2D LTR ERVL 0 414 83 202 282 28 42 chr2 177758877 177758948 -72928906 - MIR SINE MIR -114 148 79 21 0 0 0 chr2 177760979 177761000 -72926854 + AT_rich Low_complexity Low_complexity 1 21 0 2458 60 0 0 chr2 177761634 177761932 -72925922 + AluY SINE Alu 2 299 -12 4087 115 11 17 chr2 177762182 177762827 -72925027 + L1PA14 LINE L1 5518 6158 -3 191 188 21 0 chr2 177766096 177766144 -72921710 + (TA)n Simple_repeat Simple_repeat 2 50 0 213 225 0 0 chr2 177766255 177766295 -72921559 + (CATATA)n Simple_repeat Simple_repeat 5 44 0 2346 52 3 29 chr2 177767501 177767809 -72920045 - AluY SINE Alu -11 300 1 208 259 0 0 chr2 177767852 177767906 -72919948 + T-rich Low_complexity Low_complexity 1 54 0 900 191 32 32 chr2 177768212 177768400 -72919454 + L1MD1 LINE L1 6039 6226 -16 551 323 52 0 chr2 177768577 177768732 -72919122 + MIR3 SINE MIR 40 202 -6 210 310 147 26 chr2 177769592 177769708 -72918146 - MER5A DNA MER1_type -58 131 2 22 70 0 0 chr2 177769773 177769816 -72918038 + AT_rich Low_complexity Low_complexity 1 43 0 366 253 119 25 chr2 177770130 177770332 -72917522 + L1ME LINE L1 5261 5481 -689 24 0 0 0 chr2 177771228 177771252 -72916602 + AT_rich Low_complexity Low_complexity 1 24 0 419 286 56 19 chr2 177771457 177771618 -72916236 + MER5A DNA MER1_type 1 167 -22 21 0 0 0 chr2 177772496 177772517 -72915337 + AT_rich Low_complexity Low_complexity 1 21 0 382 167 0 0 chr2 177773305 177773377 -72914477 - L1PA12 LINE L1 -1 6167 6096 749 138 0 0 chr2 177773389 177773505 -72914349 + L1PA6 LINE L1 5950 6065 -89 197 372 0 23 chr2 177774269 177774355 -72913499 + L2 LINE L2 2937 3020 -252 693 290 50 70 chr2 177774381 177774784 -72913070 + MLT1J LTR MaLR 3 397 -114 206 314 0 0 chr2 177775037 177775088 -72912766 + (TGAA)n Simple_repeat Simple_repeat 1 51 0 433 215 0 0 chr2 177775215 177775308 -72912546 + L1PB2 LINE L1 4867 4959 -1187 4631 131 69 42 chr2 177775318 177776359 -72911495 + L1PB2 LINE L1 5070 6150 -1 1523 118 0 0 chr2 177776733 177776962 -72910892 + L1P5 LINE L1 5592 5820 -331 2274 112 3 0 chr2 177777630 177777935 -72909919 - AluSq SINE Alu -7 306 1 24 0 0 0 chr2 177778783 177778807 -72909047 + AT_rich Low_complexity Low_complexity 1 24 0 1427 160 0 4 chr2 177779813 177780044 -72907810 + AluJb SINE Alu 1 230 -82 212 320 87 19 chr2 177780071 177780174 -72907680 - L2 LINE L2 -7 3265 3156 226 299 110 55 chr2 177780227 177780354 -72907500 - L2 LINE L2 -2 3270 3137 196 200 11 167 chr2 177781518 177781608 -72906246 - L2 LINE L2 -39 3274 3199 288 209 70 23 chr2 177781803 177781889 -72905965 + L2 LINE L2 2690 2779 -535 955 247 85 59 chr2 177782094 177782638 -72905216 + MER34B LTR ERV1 3 537 -5 652 236 71 16 chr2 177782665 177782847 -72905007 + L2 LINE L2 3095 3286 -27 609 240 18 18 chr2 177783727 177783898 -72903956 - MER104 DNA Tc2 -2 178 8 239 326 121 28 chr2 177783932 177784073 -72903781 + L3b LINE CR1 1284 1437 -146 783 188 6 59 chr2 177785012 177785182 -72902672 + MER46A DNA MER2_type 1 161 -75 2939 152 12 14 chr2 177785184 177785679 -72902175 + Tigger1 DNA MER2_type 4 497 -1921 12424 125 23 3 chr2 177785782 177787683 -72900171 + Tigger1 DNA MER2_type 481 2418 0 301 159 0 32 chr2 177787688 177787751 -72900103 + MER46A DNA MER2_type 176 236 0 203 294 0 0 chr2 177789108 177789159 -72898695 + G-rich Low_complexity Low_complexity 3 53 0 570 247 19 7 chr2 177789339 177789493 -72898361 - MER5B DNA MER1_type -3 175 20 189 0 0 0 chr2 177789881 177789902 -72897952 + (A)n Simple_repeat Simple_repeat 1 21 0 1841 133 7 20 chr2 177790083 177790383 -72897471 - AluJb SINE Alu -15 297 2 765 217 67 17 chr2 177790503 177790683 -72897171 - MER5A DNA MER1_type 0 189 1 225 340 92 0 chr2 177792965 177793118 -72894736 - LTR33A LTR ERVL -217 306 140 783 245 72 40 chr2 177793614 177793863 -72893991 - LTR16A1 LTR ERVL 0 457 201 2395 223 81 68 chr2 177794049 177794830 -72893024 + MER21B LTR ERV1 13 803 -60 543 211 27 81 chr2 177795051 177795236 -72892618 - MER5B DNA MER1_type 0 178 4 21 0 0 0 chr2 177796765 177796786 -72891068 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 177796910 177796946 -72890908 + AT_rich Low_complexity Low_complexity 1 36 0 260 203 178 66 chr2 177797461 177797702 -72890152 + HAL1 LINE L1 1049 1316 -1191 919 252 119 72 chr2 177798115 177798559 -72889295 + MLT1F1 LTR MaLR 11 500 -67 1707 257 73 17 chr2 177799362 177799880 -72887974 - MLT1H LTR MaLR -2 547 1 283 225 184 96 chr2 177799902 177800173 -72887681 - MLT1H-int LTR MaLR -24 1347 1053 318 295 139 0 chr2 177800438 177800567 -72887287 + MLT1H LTR MaLR 396 542 -7 349 304 106 44 chr2 177801709 177801936 -72885918 - MLT1K LTR MaLR -200 388 148 796 299 48 8 chr2 177803829 177804080 -72883774 - MIR SINE MIR 0 262 2 190 271 17 34 chr2 177804811 177804870 -72882984 - MIR SINE MIR -3 259 202 465 253 83 94 chr2 177805095 177805360 -72882494 + MIR SINE MIR 1 262 0 743 300 43 12 chr2 177805619 177805872 -72881982 - MIR SINE MIR 0 262 2 339 295 71 82 chr2 177807089 177807469 -72880385 + MLT1I LTR MaLR 34 409 0 544 270 146 22 chr2 177808059 177808285 -72879569 - HAL1 LINE L1 -1821 686 433 667 327 105 30 chr2 177808441 177808975 -72878879 + L2 LINE L2 2625 3190 -123 21 57 0 0 chr2 177809268 177809303 -72878551 + AT_rich Low_complexity Low_complexity 1 35 0 2100 132 0 3 chr2 177809828 177810138 -72877716 + AluSq SINE Alu 1 309 -4 596 259 138 12 chr2 177810177 177810593 -72877261 + L1MEc LINE L1 2145 2560 -3655 2189 110 0 3 chr2 177810598 177810890 -72876964 + AluSq SINE Alu 1 291 -22 364 150 67 0 chr2 177810925 177810985 -72876869 - Tigger4(Zombi) DNA MER2_type 0 2731 2668 2521 163 51 4 chr2 177811089 177811543 -72876311 - Tigger3b DNA MER2_type -756 475 1 1581 176 45 16 chr2 177811543 177811849 -72876005 + MLT1B LTR MaLR 76 390 0 23 0 0 0 chr2 177812357 177812380 -72875474 + AT_rich Low_complexity Low_complexity 1 23 0 579 198 8 0 chr2 177813388 177813509 -72874345 + L1ME LINE L1 5367 5488 -674 244 200 214 0 chr2 177813602 177813672 -72874182 + L1MEc LINE L1 2731 2815 -3400 958 253 134 28 chr2 177813682 177814181 -72873673 + L1ME LINE L1 4703 5254 -892 798 188 150 0 chr2 177814195 177814408 -72873446 + L1ME LINE L1 5318 5562 -602 208 295 0 0 chr2 177816207 177816285 -72871569 + (TA)n Simple_repeat Simple_repeat 2 79 0 260 268 140 45 chr2 177816705 177816884 -72870970 - MIR SINE MIR -3 259 64 2394 73 0 10 chr2 177817367 177817667 -72870187 - AluY SINE Alu -13 298 2 373 253 267 0 chr2 177818010 177818228 -72869626 + MLT1G LTR MaLR 289 556 -34 5584 109 28 7 chr2 177818426 177820242 -72867612 + L1PA14 LINE L1 4336 6161 0 23 0 0 0 chr2 177820418 177820441 -72867413 + AT_rich Low_complexity Low_complexity 1 23 0 299 291 63 21 chr2 177820476 177820665 -72867189 + HAL1 LINE L1 1441 1637 -870 1142 272 98 3 chr2 177820818 177821134 -72866720 + LTR16A LTR ERVL 61 406 -44 323 272 8 0 chr2 177821140 177821265 -72866589 + GA-rich Low_complexity Low_complexity 3 128 0 227 204 0 20 chr2 177821273 177821322 -72866532 + L1MEc LINE L1 3013 3060 -3155 274 284 123 38 chr2 177821832 177822124 -72865730 + L1MEc LINE L1 3686 4002 -2213 1431 183 11 29 chr2 177822151 177822430 -72865424 + AluJo SINE Alu 16 289 -23 1780 113 0 8 chr2 177822482 177822730 -72865124 - AluSx SINE Alu -18 294 49 427 269 184 25 chr2 177822763 177823045 -72864809 + L1MEc LINE L1 4169 4495 -1720 246 277 97 20 chr2 177823187 177823382 -72864472 + L1MEc LINE L1 4568 4777 -1438 391 292 97 27 chr2 177823661 177823965 -72863889 + L1MEc LINE L1 5221 5544 -743 30 0 0 0 chr2 177823972 177824002 -72863852 + AT_rich Low_complexity Low_complexity 1 30 0 344 250 318 0 chr2 177824941 177825133 -72862721 - MIR SINE MIR -7 255 3 2125 126 3 0 chr2 177825757 177826067 -72861787 + AluSx SINE Alu 1 311 -1 5186 168 67 15 chr2 177826143 177828171 -72859683 - L1PA16 LINE L1 0 6166 4040 399 265 28 66 chr2 177831144 177831325 -72856529 + L2 LINE L2 2947 3120 -193 978 218 39 100 chr2 177831358 177831748 -72856106 + MER68 LTR ERV1 1 366 -196 234 302 151 14 chr2 177831786 177831925 -72855929 + MER68 LTR ERV1 365 522 -40 593 192 46 53 chr2 177831960 177832111 -72855743 + L2 LINE L2 3162 3311 -2 187 91 121 0 chr2 177832431 177832464 -72855390 + L2 LINE L2 3232 3268 -4 470 283 7 0 chr2 177832792 177832937 -72854917 - MER115 DNA AcHobo -2 691 546 1350 191 141 40 chr2 177833069 177833588 -72854266 - Zaphod DNA AcHobo -165 3866 3296 1041 251 109 19 chr2 177833585 177833944 -72853910 - Zaphod DNA AcHobo -3365 666 276 * 660 153 137 0 chr2 177834024 177834148 -72853706 + MSTB1 LTR MaLR 1 141 -316 2032 139 26 15 chr2 177834172 177834511 -72853343 + THE1B LTR MaLR 22 364 0 667 170 53 158 chr2 177834837 177835084 -72852770 + MSTB1 LTR MaLR 212 432 0 345 362 26 13 chr2 177835085 177835237 -72852617 - Zaphod DNA AcHobo -3855 176 23 908 273 130 26 chr2 177835549 177835857 -72851997 + MLT2E LTR ERVL 1 340 -288 652 296 67 25 chr2 177835847 177836128 -72851726 + MLT1H LTR MaLR 17 315 -234 * 1241 227 71 24 chr2 177836128 177836467 -72851387 - MLT1A1 LTR MaLR 0 365 11 246 231 28 93 chr2 177836500 177836608 -72851246 + MLT1H LTR MaLR 326 426 -129 356 322 90 6 chr2 177836885 177837062 -72850792 - MIR3 SINE MIR -11 197 6 840 255 81 12 chr2 177838046 177838293 -72849561 - L1MEc LINE L1 -6097 299 36 1852 117 68 86 chr2 177840241 177840643 -72847211 - LTR14B LTR ERVK 0 608 2 380 115 207 23 chr2 177840653 177840740 -72847114 - HERVK14 LTR ERVK -13 5932 5830 286 270 0 0 chr2 177840742 177840805 -72847049 - MER41C LTR ERV1 -491 63 1 2952 71 74 35 chr2 177840805 177841436 -72846418 - HERVK14 LTR ERVK -186 5759 5038 350 42 0 0 chr2 177841436 177841484 -72846370 - HERV17 LTR ERV1 -8145 481 434 1204 47 0 0 chr2 177841485 177841633 -72846221 - HERV17 LTR ERV1 -3074 5552 5405 * 15109 137 58 52 chr2 177841612 177844514 -72843340 - HERV17 LTR ERV1 -4872 3754 835 4727 97 75 3 chr2 177844556 177845288 -72842566 - HERVK14 LTR ERVK -5160 785 1 1615 138 92 74 chr2 177845288 177845679 -72842175 - LTR14B LTR ERVK 0 608 211 284 43 21 43 chr2 177845667 177845714 -72842140 - LTR14B LTR ERVK -562 46 1 * 719 122 6 85 chr2 177846583 177846747 -72841107 - L1MA9 LINE L1 0 6312 6162 1491 106 70 0 chr2 177846747 177846999 -72840855 - L1MA5A LINE L1 -5 6292 6019 387 139 35 47 chr2 177846999 177847085 -72840769 - L1MA9 LINE L1 -135 6177 6093 13383 84 9 6 chr2 177847099 177849745 -72838109 - L1PA7 LINE L1 -6 6148 3503 1366 129 18 86 chr2 177849745 177850024 -72837830 - L1MA5A LINE L1 -440 5872 5613 751 159 0 24 chr2 177850750 177850876 -72836978 + FLAM_A SINE Alu 4 126 -7 300 91 0 0 chr2 177852450 177852494 -72835360 + (TG)n Simple_repeat Simple_repeat 2 45 0 774 266 57 29 chr2 177853330 177853574 -72834280 + MIR SINE MIR 10 260 -2 600 128 0 0 chr2 177853574 177853660 -72834194 - Tigger4(Zombi) DNA MER2_type 0 2731 2646 * 1140 157 132 30 chr2 177853658 177853893 -72833961 - Tigger4(Zombi) DNA MER2_type -2289 442 184 474 155 0 0 chr2 177853895 177853966 -72833888 - Tigger4(Zombi) DNA MER2_type -2659 72 2 3667 186 3 40 chr2 177853972 177854842 -72833012 - L1 LINE L1 -1148 4998 4161 468 152 13 0 chr2 177854917 177854996 -72832858 + MADE1 DNA Mariner 1 80 0 213 225 0 0 chr2 177855074 177855114 -72832740 + T-rich Low_complexity Low_complexity 2 41 0 22 56 0 0 chr2 177855200 177855236 -72832618 + AT_rich Low_complexity Low_complexity 1 36 0 188 226 0 75 chr2 177857136 177857189 -72830665 + MER5C DNA MER1_type 97 145 -179 4840 243 41 17 chr2 177857310 177857497 -72830357 + L1MB8 LINE L1 2492 2673 -3473 2478 71 0 0 chr2 177857497 177857806 -72830048 - AluY SINE Alu -2 309 1 4840 243 41 17 chr2 177857806 177859166 -72828688 + L1MB8 LINE L1 2673 4075 -2071 2501 225 106 85 chr2 177859173 177859944 -72827910 - MER21B LTR ERV1 -2 902 43 1047 227 57 86 chr2 177859949 177860354 -72827500 - MSTD LTR MaLR -3 393 1 466 183 0 0 chr2 177860356 177860427 -72827427 - MER21B LTR ERV1 -774 89 19 301 200 46 0 chr2 177860460 177860525 -72827329 - MER21B LTR ERV1 -795 68 1 5410 206 31 5 chr2 177860530 177862576 -72825278 + L1MB8 LINE L1 4068 6173 -5 362 279 14 51 chr2 177863349 177863503 -72824351 + MIR SINE MIR 27 171 -67 4206 197 30 8 chr2 177864627 177865954 -72821900 - L1MB2 LINE L1 -27 6144 4790 655 213 43 7 chr2 177865970 177866138 -72821716 - FRAM SINE Alu 0 173 1 242 280 44 36 chr2 177866205 177866318 -72821536 - MER20B DNA MER1_type -21 198 82 453 319 92 27 chr2 177866439 177866734 -72821120 - MLT1K LTR MaLR -158 430 117 195 254 0 84 chr2 177866846 177866917 -72820937 + MER5C DNA MER1_type 31 95 -229 21 0 0 0 chr2 177866953 177866974 -72820880 + AT_rich Low_complexity Low_complexity 1 21 0 1099 172 13 47 chr2 177866986 177867219 -72820635 + L1MC4 LINE L1 7398 7622 -420 * 18037 168 45 38 chr2 177867206 177869294 -72818560 + L1MA2 LINE L1 9 2081 -5642 400 165 0 63 chr2 177869294 177869373 -72818481 + AluJb SINE Alu 61 134 -168 18037 168 45 38 chr2 177869373 177874685 -72813169 + L1MA2 LINE L1 2081 7545 -178 25 31 0 0 chr2 177874685 177874717 -72813137 + AT_rich Low_complexity Low_complexity 1 32 0 269 236 114 57 chr2 177874802 177874925 -72812929 + L1MC4 LINE L1 7912 8041 -1 1110 140 16 0 chr2 177875024 177875217 -72812637 + L1MA2 LINE L1 6103 6298 -6 998 217 86 82 chr2 177875225 177875420 -72812434 + L1MC4 LINE L1 7611 7804 -238 2148 133 125 8 chr2 177875420 177875803 -72812051 + MSTA LTR MaLR 1 428 0 998 217 86 82 chr2 177875803 177876036 -72811818 + L1MC4 LINE L1 7804 8041 -1 233 176 82 47 chr2 177876458 177876543 -72811311 - HAL1b LINE L1 -921 427 340 1587 255 38 42 chr2 177876581 177877086 -72810768 + MER21B LTR ERV1 61 563 -300 587 182 146 18 chr2 177877960 177878125 -72809729 - MER53 DNA DNA 0 189 4 180 317 152 37 chr2 177878959 177879123 -72808731 + L3 LINE CR1 1187 1369 -208 464 275 109 49 chr2 177879856 177880103 -72807751 - MIR SINE MIR 0 262 1 1035 208 232 67 chr2 177880307 177880892 -72806962 + SATR1 Satellite Satellite 1 681 -2 1102 206 217 36 chr2 177880903 177881385 -72806469 + SATR1 Satellite Satellite 1 569 -1 1351 199 267 3 chr2 177881408 177882717 -72805137 + SATR1 Satellite Satellite 1 1653 -94 2240 156 110 25 chr2 177882740 177883429 -72804425 + SATR1 Satellite Satellite 1 747 -132 440 188 0 0 chr2 177883431 177883500 -72804354 - AluS SINE Alu -240 73 5 324 280 0 0 chr2 177883537 177883612 -72804242 + MER2 DNA MER2_type 270 344 -1 1417 232 150 22 chr2 177883613 177883884 -72803970 + MLT1F1 LTR MaLR 48 283 -284 1693 198 31 11 chr2 177883884 177884242 -72803612 - MLT1A1 LTR MaLR 0 365 1 1417 232 150 22 chr2 177884242 177884431 -72803423 + MLT1F1 LTR MaLR 283 567 0 371 272 93 70 chr2 177885944 177886462 -72801392 - MER31-int LTR ERV1 -1077 3859 3330 2228 162 16 69 chr2 177887126 177887576 -72800278 - MSTB LTR MaLR 0 426 1 374 288 36 63 chr2 177887581 177887803 -72800051 + LTR16B LTR ERVL 249 464 0 397 363 0 24 chr2 177887804 177887972 -72799882 + ERVL LTR ERVL 3 166 -4830 3516 324 57 57 chr2 177887980 177890322 -72797532 + ERVL LTR ERVL 944 3512 -2252 352 138 77 0 chr2 177890322 177890412 -72797442 + Alu SINE Alu 247 293 -8 3516 324 57 57 chr2 177890412 177891619 -72796235 + ERVL LTR ERVL 3512 4717 -1047 358 325 66 46 chr2 177891871 177892237 -72795617 + ERVL LTR ERVL 4972 5383 -381 362 325 6 17 chr2 177892343 177892521 -72795333 + LTR16A LTR ERVL 1 149 -315 314 95 0 0 chr2 177892747 177892789 -72795065 - MLT2A2 LTR ERVL 0 453 412 459 0 0 0 chr2 177892789 177892840 -72795014 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 211 219 24 24 chr2 177892851 177892933 -72794921 + (TA)n Simple_repeat Simple_repeat 2 83 0 2956 80 23 9 chr2 177892935 177893341 -72794513 - MLT2A1 LTR ERVL -40 475 2 555 339 41 9 chr2 177893479 177893700 -72794154 - MIR SINE MIR -27 235 8 278 401 27 14 chr2 177895126 177895348 -72792506 + L2 LINE L2 2052 2276 -1038 432 262 26 50 chr2 177895791 177895985 -72791869 + MIR SINE MIR 28 221 -41 2313 57 4 0 chr2 177896101 177896416 -72791438 - AluY SINE Alu 0 316 1 497 256 56 8 chr2 177896542 177896667 -72791187 + MER5A DNA MER1_type 4 134 -55 1949 123 33 13 chr2 177897030 177897331 -72790523 + AluSx SINE Alu 5 311 -1 245 278 0 0 chr2 177898720 177898774 -72789080 - L2 LINE L2 -31 3282 3229 338 325 49 8 chr2 177898882 177899005 -72788849 + L2 LINE L2 2910 3037 -235 260 180 0 0 chr2 177899233 177899283 -72788571 - FLAM_A SINE Alu 0 133 84 443 294 105 85 chr2 177899507 177900083 -72787771 - L2 LINE L2 -926 2388 1796 2129 123 7 13 chr2 177900083 177900392 -72787462 + AluSx SINE Alu 1 307 -5 443 294 105 85 chr2 177900392 177900484 -72787370 - L2 LINE L2 -1518 1796 1707 196 265 41 0 chr2 177900625 177900674 -72787180 - L2 LINE L2 -81 3232 3182 806 251 129 13 chr2 177901125 177901428 -72786426 - MER46C DNA MER2_type 0 338 1 228 35 0 0 chr2 177901875 177901904 -72785950 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 447 276 70 35 chr2 177903181 177903380 -72784474 + MIR SINE MIR 29 234 -28 185 214 10 133 chr2 177903612 177903710 -72784144 - MER5A DNA MER1_type -29 160 75 361 285 40 40 chr2 177903867 177904018 -72783836 + L2 LINE L2 3163 3313 0 1020 259 71 61 chr2 177904322 177904925 -72782929 - L1MEc LINE L1 -4251 2145 1537 332 198 0 12 chr2 177904943 177905029 -72782825 - L1MB3 LINE L1 -7 6176 6092 507 238 25 0 chr2 177905042 177905164 -72782690 - L1MA4 LINE L1 -283 6017 5893 406 198 0 19 chr2 177905157 177905263 -72782591 - L1MEc LINE L1 -4864 1532 1429 * 3002 214 100 16 chr2 177905272 177906122 -72781732 - L1MEc LINE L1 -5146 1059 139 2012 72 0 8 chr2 177906572 177906847 -72781007 - AluY SINE Alu 0 304 32 29 0 0 0 chr2 177907274 177907303 -72780551 + AT_rich Low_complexity Low_complexity 1 29 0 235 316 40 0 chr2 177907314 177907390 -72780464 + MIR3 SINE MIR 113 191 -17 443 42 141 14 chr2 177908512 177908583 -72779271 + MADE1 DNA Mariner 1 80 0 240 111 0 0 chr2 177908673 177908709 -72779145 + (TG)n Simple_repeat Simple_repeat 2 37 0 789 252 74 79 chr2 177908986 177909404 -72778450 - L2 LINE L2 -37 3276 2814 433 324 123 5 chr2 177909697 177909916 -72777938 - L3 LINE CR1 -9 1568 1324 181 265 0 0 chr2 177909935 177909984 -72777870 - L2 LINE L2 -19 3294 3246 265 254 14 28 chr2 177910968 177911039 -72776815 + MER113 DNA MER1_type? 317 386 -135 372 125 23 11 chr2 177911102 177911190 -72776664 + CT-rich Low_complexity Low_complexity 1 89 0 24 32 0 0 chr2 177911894 177911925 -72775929 + AT_rich Low_complexity Low_complexity 1 31 0 280 228 35 0 chr2 177912163 177912220 -72775634 + L2 LINE L2 3205 3263 -9 817 112 0 0 chr2 177912335 177912463 -72775391 + AluJb SINE Alu 180 307 0 1286 93 0 51 chr2 177912575 177912789 -72775065 + L1PB1 LINE L1 5948 6150 -1 806 110 0 0 chr2 177912671 177912790 -72775064 + L1PB1 LINE L1 6033 6197 0 187 174 0 0 chr2 177912790 177912836 -72775018 + A-rich Low_complexity Low_complexity 1 180 0 1693 137 98 29 chr2 177913521 177913836 -72774018 + MER1B DNA MER1_type 1 337 0 47 53 0 0 chr2 177915408 177915483 -72772371 + AT_rich Low_complexity Low_complexity 1 75 0 267 318 205 0 chr2 177915751 177915902 -72771952 - L2 LINE L2 -1 3271 3090 2072 223 54 51 chr2 177916047 177916638 -72771216 - MLT1E LTR MaLR 0 593 1 320 259 21 91 chr2 177916836 177916979 -72770875 - MER102a DNA MER1_type 0 330 198 1539 135 4 4 chr2 177917312 177917549 -72770305 + AluSx SINE Alu 4 240 -72 198 0 0 0 chr2 177917559 177917581 -72770273 + (A)n Simple_repeat Simple_repeat 1 22 0 180 0 0 0 chr2 177917927 177917947 -72769907 + (CACCC)n Simple_repeat Simple_repeat 5 24 0 2460 15 0 0 chr2 177918492 177918763 -72769091 - AluYa5 SINE Alu -4 307 37 712 109 141 0 chr2 177919447 177919575 -72768279 - L1M1 LINE L1 -835 5465 5320 2107 124 3 0 chr2 177921580 177921863 -72765991 + AluSx SINE Alu 1 284 -28 523 269 33 16 chr2 177922243 177922425 -72765429 - L2 LINE L2 -205 3108 2924 305 340 16 43 chr2 177922470 177922655 -72765199 + L2 LINE L2 3084 3263 -9 2175 99 3 3 chr2 177922676 177922970 -72764884 - AluSq SINE Alu -18 295 2 211 281 56 22 chr2 177923096 177923185 -72764669 + L2 LINE L2 2992 3083 -189 687 275 136 56 chr2 177923407 177923872 -72763982 + MLT1J LTR MaLR 1 502 -9 695 300 63 5 chr2 177924610 177924833 -72763021 - MIR SINE MIR -8 254 19 1948 164 40 6 chr2 177925281 177925634 -72762220 + L1M4 LINE L1 5404 5768 -410 1500 122 31 31 chr2 177925735 177925834 -72762020 + THE1B-int LTR MaLR 1325 1423 -157 2120 113 51 23 chr2 177925834 177926187 -72761667 + THE1B LTR MaLR 2 364 0 1500 122 31 31 chr2 177926187 177926342 -72761512 + THE1B-int LTR MaLR 1422 1579 -1 2193 143 13 19 chr2 177926343 177926720 -72761134 + THE1C LTR MaLR 1 375 0 587 252 107 64 chr2 177927582 177927816 -72760038 + MIR SINE MIR 7 250 -12 391 217 48 0 chr2 177927831 177927914 -72759940 - L2 LINE L2 0 3272 3186 21 36 0 0 chr2 177928441 177928469 -72759385 + AT_rich Low_complexity Low_complexity 1 28 0 549 254 129 32 chr2 177928635 177928914 -72758940 - L1M4 LINE L1 -2764 3382 3077 491 258 23 0 chr2 177928940 177929068 -72758786 + FLAM_A SINE Alu 9 139 -3 24 0 0 0 chr2 177929071 177929095 -72758759 + AT_rich Low_complexity Low_complexity 1 24 0 259 272 66 49 chr2 177929754 177929908 -72757946 + MLT1J LTR MaLR 263 513 -102 251 174 0 0 chr2 177929916 177929962 -72757892 + MLT1L LTR MaLR 563 608 -7 1709 169 7 43 chr2 177930050 177930352 -72757502 - AluSx SINE Alu -21 291 1 25 0 0 0 chr2 177930357 177930382 -72757472 + AT_rich Low_complexity Low_complexity 1 25 0 565 234 9 0 chr2 177930384 177930495 -72757359 + FLAM_A SINE Alu 1 112 -30 503 306 71 39 chr2 177930903 177931213 -72756641 - L1MC/D LINE L1 -2173 5635 5316 245 286 48 48 chr2 177931462 177931630 -72756224 + L1ME LINE L1 4663 4830 -1316 667 49 0 0 chr2 177931744 177931826 -72756028 + L1PA5 LINE L1 6038 6119 -35 21 0 0 0 chr2 177932057 177932078 -72755776 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 177932272 177932301 -72755553 + AT_rich Low_complexity Low_complexity 1 29 0 262 226 19 0 chr2 177932937 177932990 -72754864 + AluJ/monomer SINE Alu 3 56 -246 235 232 18 0 chr2 177933298 177933354 -72754500 + (CA)n Simple_repeat Simple_repeat 2 58 0 191 328 0 0 chr2 177933392 177933450 -72754404 + L2 LINE L2 3242 3299 -14 364 296 79 25 chr2 177933539 177933742 -72754112 + L1ME LINE L1 5534 5747 -374 22 35 0 0 chr2 177935080 177935109 -72752745 + AT_rich Low_complexity Low_complexity 1 29 0 231 36 0 0 chr2 177935605 177935633 -72752221 + (CA)n Simple_repeat Simple_repeat 1 28 0 673 286 97 9 chr2 177935776 177936003 -72751851 - MIR SINE MIR -14 248 2 2330 97 0 0 chr2 177936352 177936677 -72751177 - AluSq SINE Alu 0 313 1 1103 104 0 7 chr2 177936875 177937029 -72750825 + MER46A DNA MER2_type 84 236 0 328 349 0 0 chr2 177937030 177937136 -72750718 - MIR SINE MIR -109 153 48 24 32 0 0 chr2 177937279 177937310 -72750544 + AT_rich Low_complexity Low_complexity 1 31 0 584 278 79 14 chr2 177937961 177938177 -72749677 - MIR SINE MIR -25 237 8 207 349 93 0 chr2 177938633 177938762 -72749092 - MIR SINE MIR 0 262 122 2631 148 20 129 chr2 177938862 177939544 -72748310 + L1MA9 LINE L1 5698 6305 -7 5751 103 25 1 chr2 177939642 177940468 -72747386 - Tigger1 DNA MER2_type 0 2418 1573 432 0 0 0 chr2 177940690 177940738 -72747116 + (TA)n Simple_repeat Simple_repeat 2 49 0 5447 88 24 4 chr2 177941698 177942436 -72745418 - THE1B-int LTR MaLR -826 754 2 2086 143 36 17 chr2 177942438 177942794 -72745060 - THE1B LTR MaLR -1 363 1 455 95 0 0 chr2 177942994 177943057 -72744797 - AluJ/FLAM SINE Alu -249 63 1 622 306 86 55 chr2 177943396 177943814 -72744040 - L3 LINE CR1 -6 1571 1141 621 296 5 25 chr2 177943845 177944041 -72743813 - MIR SINE MIR -65 197 6 201 270 122 27 chr2 177944080 177944154 -72743700 - L3 LINE CR1 -486 1091 1011 540 313 72 20 chr2 177944221 177944470 -72743384 + MER102b DNA MER1_type 78 339 -2 194 247 110 14 chr2 177944487 177944560 -72743294 - L3 LINE CR1 -575 1002 923 266 311 127 59 chr2 177945110 177945599 -72742255 - MLT1L LTR MaLR -6 609 88 373 271 0 0 chr2 177945995 177946080 -72741774 + MLT1H LTR MaLR 73 157 -392 356 250 0 0 chr2 177947772 177947844 -72740010 + MER58A DNA MER1_type 24 95 -12 1405 220 93 28 chr2 177948243 177948630 -72739224 - MER66A LTR ERV1 -40 438 27 560 285 28 33 chr2 177948880 177949094 -72738760 + L1M3b LINE L1 1 213 -6068 1537 132 4 0 chr2 177949102 177949352 -72738502 + L1 LINE L1 4132 4382 -1764 305 238 36 12 chr2 177950127 177950211 -72737643 + MIR3 SINE MIR 123 208 0 1180 164 14 10 chr2 177950423 177950630 -72737224 + AluSx SINE Alu 13 220 -92 23 54 0 0 chr2 177951179 177951216 -72736638 + AT_rich Low_complexity Low_complexity 1 37 0 2288 85 3 22 chr2 177951589 177951905 -72735949 + AluY SINE Alu 1 310 -1 1108 125 6 0 chr2 177951906 177952082 -72735772 + L1P LINE L1 3295 3471 -2675 27 29 0 0 chr2 177952859 177952893 -72734961 + AT_rich Low_complexity Low_complexity 1 34 0 1844 66 8 37 chr2 177953470 177953714 -72734140 - AluY SINE Alu -58 253 17 23 78 0 0 chr2 177954675 177954726 -72733128 + AT_rich Low_complexity Low_complexity 1 51 0 2242 128 0 0 chr2 177954885 177955191 -72732663 - AluSx SINE Alu -4 308 3 359 256 231 13 chr2 177955232 177955388 -72732466 - Charlie8 DNA MER1_type -2136 281 92 488 240 27 34 chr2 177955489 177955635 -72732219 + MIR SINE MIR 100 244 -18 2989 86 12 88 chr2 177956714 177957204 -72730650 - MLT2A2 LTR ERVL 0 453 1 6469 91 3 1 chr2 177957685 177959323 -72728531 + L1PA7 LINE L1 4451 6092 -62 726 281 7 17 chr2 177960557 177960849 -72727005 + L1M4 LINE L1 3692 3980 -2166 252 307 100 40 chr2 177960928 177961078 -72726776 - MER88 LTR ERVL -209 255 97 1125 99 0 0 chr2 177961159 177961301 -72726553 + AluSq/x SINE Alu 3 144 -169 4506 138 21 7 chr2 177961401 177962117 -72725737 - Tigger1 DNA MER2_type -1668 750 25 1470 150 66 23 chr2 177963977 177964165 -72723689 - L1M3 LINE L1 -599 5584 5405 2167 100 7 0 chr2 177964165 177964455 -72723399 - AluY SINE Alu -19 292 1 1470 150 66 23 chr2 177964455 177964653 -72723201 - L1M3 LINE L1 -778 5405 5186 481 305 79 8 chr2 177965417 177965784 -72722070 - L1MEc LINE L1 -4971 1425 1033 302 306 66 0 chr2 177965799 177965920 -72721934 - L1MEc LINE L1 -5579 817 689 1465 174 70 14 chr2 177965921 177966208 -72721646 + AluJb SINE Alu 1 303 -9 2502 101 13 16 chr2 177966225 177966601 -72721253 - THE1C LTR MaLR 0 375 1 441 267 0 8 chr2 177966601 177966721 -72721133 - L1MEc LINE L1 -5693 703 585 326 289 9 44 chr2 177967416 177967530 -72720324 - L2 LINE L2 -6 3307 3198 3521 96 10 20 chr2 177967530 177967774 -72720080 + MER84 LTR ERVI 1 246 -261 3671 53 0 0 chr2 177967774 177968229 -72719625 - L1PA5 LINE L1 0 6154 5700 3521 96 10 20 chr2 177968229 177968495 -72719359 + MER84 LTR ERVI 246 506 -1 268 371 34 0 chr2 177970170 177970259 -72717595 + L2 LINE L2 3122 3213 -59 7554 101 1 5 chr2 177971587 177972673 -72715181 - L1P LINE L1 -1445 4701 3620 22 0 0 0 chr2 177972829 177972851 -72715003 + AT_rich Low_complexity Low_complexity 1 22 0 515 258 23 8 chr2 177972892 177973024 -72714830 + MIR SINE MIR 55 188 -74 264 250 0 0 chr2 177973026 177973086 -72714768 + Looper DNA T2_type 6 65 -1493 247 147 15 162 chr2 177973086 177973154 -72714700 + MIR SINE MIR 205 262 0 43 88 0 0 chr2 177973154 177973267 -72714587 + AT_rich Low_complexity Low_complexity 1 113 0 1367 104 36 5 chr2 177973327 177973548 -72714306 - L1PB2 LINE L1 -15 6136 5909 22 0 0 0 chr2 177973856 177973878 -72713976 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 177973947 177973970 -72713884 + AT_rich Low_complexity Low_complexity 1 23 0 2259 212 49 2 chr2 177974551 177975022 -72712832 + Tigger1 DNA MER2_type 1 493 -1925 355 289 33 0 chr2 177975025 177975146 -72712708 + L1PB4 LINE L1 6020 6144 -12 3173 77 9 7 chr2 177975178 177975605 -72712249 - L1PA10 LINE L1 -23 6145 5718 3252 121 18 2 chr2 177975620 177976133 -72711721 + Tigger1 DNA MER2_type 481 1001 -1417 695 165 0 0 chr2 177976233 177976348 -72711506 + AluJb SINE Alu 183 297 -15 392 245 49 21 chr2 177976950 177977093 -72710761 + GA-rich Low_complexity Low_complexity 3 149 0 376 244 0 11 chr2 177977625 177977715 -72710139 + MIR SINE MIR 172 260 -2 1873 206 24 44 chr2 177978612 177978661 -72709193 - MER49 LTR ERV1 -1 922 874 2104 115 3 42 chr2 177978661 177978974 -72708880 - AluSx SINE Alu -11 301 1 1873 206 24 44 chr2 177978974 177979501 -72708353 - MER49 LTR ERV1 -49 874 164 3152 173 11 5 chr2 177979603 177980177 -72707677 - MSTA-int LTR MaLR -1074 577 1 2015 203 58 5 chr2 177980181 177980576 -72707278 - MSTA LTR MaLR -12 416 1 2401 59 3 7 chr2 177980610 177980913 -72706941 + AluY SINE Alu 1 302 -9 320 154 108 0 chr2 177981328 177981393 -72706461 + Tigger7 DNA MER2_type 2416 2487 0 1205 246 68 52 chr2 177981890 177982387 -72705467 + MLT1D LTR MaLR 1 505 0 245 292 35 44 chr2 177982728 177982841 -72705013 - L2 LINE L2 -38 3275 3164 185 238 0 0 chr2 177982986 177983028 -72704826 - MIR3 SINE MIR -15 193 152 2247 119 0 3 chr2 177983493 177983804 -72704050 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr2 177984005 177984026 -72703828 + AT_rich Low_complexity Low_complexity 1 21 0 940 111 74 53 chr2 177984159 177984348 -72703506 + MSTB-int LTR MaLR 1446 1638 -13 1647 178 68 110 chr2 177984352 177984721 -72703133 + MSTB LTR MaLR 7 357 -69 1767 146 3 37 chr2 177984721 177985015 -72702839 - AluSx SINE Alu -28 284 1 1647 178 68 110 chr2 177985015 177985083 -72702771 + MSTB LTR MaLR 357 426 0 737 321 42 4 chr2 177985089 177985354 -72702500 - LTR16C LTR ERVL -78 413 139 618 190 298 10 chr2 177986276 177986493 -72701361 - MLT1E1 LTR MaLR -241 410 132 8729 108 61 16 chr2 177986496 177987839 -72700015 + L1P3 LINE L1 6 1408 -5053 22 35 0 0 chr2 177988166 177988195 -72699659 + AT_rich Low_complexity Low_complexity 1 29 0 5185 168 31 19 chr2 177989585 177990870 -72696984 + L1MA7 LINE L1 4989 6285 -6 381 172 0 0 chr2 177991096 177991160 -72696694 + MIR SINE MIR 76 139 -123 298 278 48 63 chr2 177991199 177991451 -72696403 - L1MC5 LINE L1 -54 7907 7660 988 84 28 0 chr2 177992210 177992352 -72695502 - L1PB2 LINE L1 -3 6148 6003 957 195 65 28 chr2 177992800 177993015 -72694839 + MER58A DNA MER1_type 1 223 -1 439 186 111 22 chr2 177993342 177993484 -72694370 + LTR33A LTR ERVL 1 178 -343 335 295 57 16 chr2 177993523 177993645 -72694209 + LTR33A LTR ERVL 258 384 -139 23 33 0 0 chr2 177993884 177993914 -72693940 + AT_rich Low_complexity Low_complexity 1 30 0 221 368 11 11 chr2 177994586 177994681 -72693173 - MIR SINE MIR -64 144 50 302 122 0 0 chr2 177994731 177994780 -72693074 - MER20 DNA MER1_type -6 213 165 497 265 103 58 chr2 177995011 177995172 -72692682 - MER34B LTR ERV1 0 565 413 1395 187 59 14 chr2 177995172 177995461 -72692393 + AluJo SINE Alu 1 302 -10 497 265 103 58 chr2 177995461 177995788 -72692066 - MER34B LTR ERV1 -152 413 5 250 81 27 0 chr2 177995760 177995797 -72692057 - MER4D LTR ERV1 -587 316 279 * 306 358 64 60 chr2 177995841 177996123 -72691731 - L1ME LINE L1 -5707 363 81 198 421 13 0 chr2 177996293 177996452 -72691402 + L2 LINE L2 1814 1974 -1340 2030 134 16 3 chr2 177996484 177996790 -72691064 + AluSx SINE Alu 1 310 -2 2190 115 6 18 chr2 177997513 177997852 -72690002 - MER44D DNA MER2_type -4 605 1 434 307 105 22 chr2 177998230 177998458 -72689396 + MIR SINE MIR 4 250 -12 448 297 72 54 chr2 177999045 177999267 -72688587 - MIR SINE MIR -20 242 17 3766 96 5 20 chr2 177999768 178000320 -72687534 + L1PA13 LINE L1 5615 6158 -5 265 360 41 14 chr2 178000893 178001040 -72686814 + L2 LINE L2 2639 2789 -525 206 222 0 0 chr2 178001420 178001465 -72686389 + (CAGAGA)n Simple_repeat Simple_repeat 6 50 0 989 247 14 9 chr2 178002054 178002277 -72685577 - MER58A DNA MER1_type 0 224 1 1782 87 0 0 chr2 178002779 178003009 -72684845 + AluSg/x SINE Alu 76 305 -7 765 211 16 54 chr2 178003655 178003840 -72684014 + MER97c DNA MER1_type? 2 179 -911 734 230 79 58 chr2 178003884 178004329 -72683525 + Charlie4a DNA MER1_type 1 508 0 199 216 273 34 chr2 178004369 178004457 -72683397 - MIR3 SINE MIR -12 196 88 6730 152 39 18 chr2 178005564 178006243 -72681611 - L1MA8 LINE L1 0 6291 5628 1511 206 7 7 chr2 178006243 178006549 -72681305 - AluJo SINE Alu -6 306 1 6730 152 39 18 chr2 178006549 178008123 -72679731 - L1MA8 LINE L1 -663 5628 3996 1647 137 40 22 chr2 178008375 178008652 -72679202 + AluJb SINE Alu 1 282 -30 26 48 0 32 chr2 178010353 178010391 -72677463 + AT_rich Low_complexity Low_complexity 1 38 -22 2449 75 0 7 chr2 178010391 178010696 -72677158 - AluY SINE Alu -8 303 1 26 48 0 32 chr2 178010696 178010719 -72677135 + AT_rich Low_complexity Low_complexity 38 60 0 24 32 0 0 chr2 178012266 178012297 -72675557 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 178012926 178012948 -72674906 + AT_rich Low_complexity Low_complexity 1 22 0 217 299 78 0 chr2 178013409 178013486 -72674368 + MIR SINE MIR 23 105 -157 4359 175 84 65 chr2 178014336 178014556 -72673298 - Charlie1a DNA MER1_type -1307 1454 1240 2226 101 0 7 chr2 178014556 178014853 -72673001 + AluSg SINE Alu 1 295 -15 4359 175 84 65 chr2 178014853 178016037 -72671817 - Charlie1a DNA MER1_type -1521 1240 2 270 143 0 0 chr2 178017492 178017541 -72670313 + (GAA)n Simple_repeat Simple_repeat 1 49 0 578 225 0 42 chr2 178017628 178017770 -72670084 + MER20 DNA MER1_type 80 215 -4 22 70 0 0 chr2 178019190 178019233 -72668621 + AT_rich Low_complexity Low_complexity 1 43 0 2767 10 0 0 chr2 178019777 178020083 -72667771 + AluY SINE Alu 1 306 -5 26 50 0 0 chr2 178020433 178020473 -72667381 + AT_rich Low_complexity Low_complexity 1 40 0 713 113 121 0 chr2 178020479 178020620 -72667234 - L1MA6 LINE L1 0 6300 6143 23 33 0 0 chr2 178021587 178021617 -72666237 + AT_rich Low_complexity Low_complexity 1 30 0 265 252 156 52 chr2 178022694 178022829 -72665025 + MIR3 SINE MIR 48 196 -12 1384 171 113 13 chr2 178023516 178023569 -72664285 - L1MB7 LINE L1 -19 6165 6119 1982 153 14 11 chr2 178023569 178023916 -72663938 + MER7A DNA MER2_type 1 346 0 1384 171 113 13 chr2 178023916 178024172 -72663682 - L1MB7 LINE L1 -65 6119 5825 1402 114 50 5 chr2 178024749 178024969 -72662885 + MER30 DNA MER1_type 1 230 0 2169 122 0 0 chr2 178025064 178025367 -72662487 - AluSx SINE Alu -7 305 3 211 260 0 0 chr2 178025376 178025426 -72662428 - L2 LINE L2 0 3313 3264 989 217 61 5 chr2 178025832 178026044 -72661810 + MER58A DNA MER1_type 1 224 0 22 35 0 0 chr2 178026437 178026466 -72661388 + AT_rich Low_complexity Low_complexity 1 29 0 183 42 0 0 chr2 178026811 178026835 -72661019 + (TA)n Simple_repeat Simple_repeat 1 24 0 1002 162 5 56 chr2 178026932 178027148 -72660706 + MER3 DNA MER1_type 1 205 -4 30 27 0 0 chr2 178027257 178027294 -72660560 + AT_rich Low_complexity Low_complexity 1 37 0 226 406 42 14 chr2 178029807 178029950 -72657904 - L2 LINE L2 -9 3263 3117 22 70 0 0 chr2 178030773 178030816 -72657038 + AT_rich Low_complexity Low_complexity 1 43 0 193 367 133 21 chr2 178031691 178031931 -72655923 + L2 LINE L2 2811 3077 -195 224 221 0 15 chr2 178032157 178032225 -72655629 + (TA)n Simple_repeat Simple_repeat 2 68 0 30 45 0 0 chr2 178033218 178033262 -72654592 + AT_rich Low_complexity Low_complexity 1 44 0 2450 243 74 24 chr2 178033309 178034166 -72653688 - L1ME3A LINE L1 -62 6108 5211 3017 223 99 17 chr2 178034378 178035268 -72652586 - L1MC4a LINE L1 -1 7807 6845 198 167 0 0 chr2 178036917 178036953 -72650901 + C-rich Low_complexity Low_complexity 2 37 0 1577 178 3 23 chr2 178036953 178037256 -72650598 - AluJb SINE Alu -15 297 1 1957 83 8 0 chr2 178037278 178037532 -72650322 + AluSq SINE Alu 44 299 -14 945 263 89 41 chr2 178039793 178040162 -72647692 - L2 LINE L2 -16 3297 2911 354 331 122 14 chr2 178040552 178040839 -72647015 + L2 LINE L2 724 1041 -2273 427 314 66 7 chr2 178041021 178041226 -72646628 + MIR SINE MIR 24 243 -19 279 281 86 16 chr2 178042434 178042562 -72645292 + MIR SINE MIR 41 177 -85 537 281 164 8 chr2 178042672 178042935 -72644919 - MER102b DNA MER1_type 0 341 38 289 281 62 47 chr2 178043420 178043548 -72644306 - L2 LINE L2 -16 3297 3168 190 403 137 0 chr2 178044014 178044138 -72643716 + L2 LINE L2 2882 3022 -250 2037 123 0 0 chr2 178044265 178044573 -72643281 - AluSg SINE Alu 0 308 1 4876 130 67 12 chr2 178044573 178045506 -72642348 - L1PA16 LINE L1 -11 6155 5172 658 183 0 89 chr2 178045502 178045682 -72642172 + L1P LINE L1 4901 5064 -1082 * 750 251 52 14 chr2 178045777 178045988 -72641866 - MER20 DNA MER1_type 0 219 1 1221 139 23 14 chr2 178046429 178046644 -72641210 - L1MC1 LINE L1 -2 6331 6115 783 173 0 0 chr2 178046673 178046800 -72641054 - FLAM_A SINE Alu -6 127 1 727 304 73 34 chr2 178047195 178047606 -72640248 + MLT1K LTR MaLR 162 588 0 220 188 141 62 chr2 178048561 178048625 -72639229 + L2 LINE L2 3242 3310 -3 231 306 0 0 chr2 178049037 178049099 -72638755 + L1ME3A LINE L1 5571 5632 -538 246 62 0 0 chr2 178049099 178049131 -72638723 + (T)n Simple_repeat Simple_repeat 1 32 0 1618 138 8 0 chr2 178049133 178049373 -72638481 - AluSq SINE Alu -71 242 1 1364 228 159 41 chr2 178049373 178049838 -72638016 + L1ME3A LINE L1 5619 6138 -32 441 254 145 94 chr2 178050204 178050598 -72637256 + MLT1H LTR MaLR 136 549 0 224 313 152 19 chr2 178050849 178051060 -72636794 + L3b LINE CR1 1250 1488 -95 2032 113 36 3 chr2 178051154 178051456 -72636398 + AluSq SINE Alu 1 312 -1 2623 98 0 3 chr2 178052218 178052574 -72635280 + THE1A LTR MaLR 1 355 0 11398 96 8 4 chr2 178052574 178054148 -72633706 + THE1A-int LTR MaLR 1 1580 0 2570 88 3 28 chr2 178054148 178054384 -72633470 + THE1A LTR MaLR 1 226 -129 2185 130 0 0 chr2 178054384 178054685 -72633169 + AluSc SINE Alu 1 301 -8 2570 88 3 28 chr2 178054685 178054812 -72633042 + THE1A LTR MaLR 226 355 0 830 266 98 36 chr2 178055848 178056265 -72631589 + L1ME3A LINE L1 26 468 -5955 351 317 59 53 chr2 178056336 178056715 -72631139 + L1ME3A LINE L1 820 1192 -5231 1073 312 72 28 chr2 178056813 178057740 -72630114 + L1ME3A LINE L1 1515 2482 -4640 2511 247 105 13 chr2 178057780 178057996 -72629858 + L1ME3A LINE L1 2563 2758 -4183 1814 197 42 14 chr2 178057996 178058356 -72629498 - MLT1A2 LTR MaLR -1 373 4 2511 247 105 13 chr2 178058356 178059511 -72628343 + L1ME3A LINE L1 2758 4017 -2924 383 351 41 0 chr2 178059514 178059685 -72628169 + L1ME3A LINE L1 4104 4281 -2660 277 330 18 0 chr2 178059720 178059832 -72628022 + L1ME3A LINE L1 4390 4503 -2438 * 1083 267 93 19 chr2 178059826 178060461 -72627393 + L1ME3A LINE L1 6240 6955 -10 1759 148 11 0 chr2 178060515 178060798 -72627056 - AluJb SINE Alu -26 286 1 1841 161 3 3 chr2 178061072 178061370 -72626484 + AluJb SINE Alu 1 298 -14 787 280 74 113 chr2 178062235 178062732 -72625122 - L1MEd LINE L1 -5008 1111 596 3546 118 20 23 chr2 178062732 178063292 -72624562 + L1PA15 LINE L1 5605 6162 -3 787 280 74 113 chr2 178063292 178063667 -72624187 - L1MEd LINE L1 -5523 596 208 909 190 82 5 chr2 178063667 178063862 -72623992 + MER63A DNA MER1_type 1 210 0 787 280 74 113 chr2 178063862 178063923 -72623931 - L1MEd LINE L1 -5911 208 146 2694 87 0 6 chr2 178063923 178064289 -72623565 + THE1B LTR MaLR 1 364 0 787 280 74 113 chr2 178064289 178064508 -72623346 - L1MEd LINE L1 -5973 146 2 391 301 44 18 chr2 178064552 178064778 -72623076 - L1ME4a LINE L1 -4 6117 5886 1270 95 0 6 chr2 178064779 178064948 -72622906 - AluSg/x SINE Alu -19 293 126 2334 97 0 3 chr2 178064948 178065256 -72622598 - AluSq SINE Alu -6 307 1 27 0 0 0 chr2 178066123 178066150 -72621704 + AT_rich Low_complexity Low_complexity 1 27 0 505 289 83 15 chr2 178066685 178066889 -72620965 + MIR SINE MIR 1 218 -44 228 295 82 41 chr2 178066960 178067082 -72620772 - L2 LINE L2 -8 3305 3179 2515 73 13 50 chr2 178067224 178067606 -72620248 - L1PA11 LINE L1 0 6174 5807 557 305 86 26 chr2 178067650 178067883 -72619971 + MIR SINE MIR 6 252 -10 186 43 0 0 chr2 178067883 178067906 -72619948 + (TGG)n Simple_repeat Simple_repeat 3 25 0 21 57 0 0 chr2 178068770 178068805 -72619049 + AT_rich Low_complexity Low_complexity 1 35 0 1883 178 0 13 chr2 178068867 178069181 -72618673 + AluJo SINE Alu 3 312 0 211 374 10 20 chr2 178069922 178070021 -72617833 - L2 LINE L2 -6 3266 3169 1809 232 73 8 chr2 178070470 178070979 -72616875 - MLT1F LTR MaLR 0 542 1 350 274 62 75 chr2 178071055 178071201 -72616653 + L2 LINE L2 3170 3313 0 3384 170 31 31 chr2 178073477 178074217 -72613637 - L1MB4 LINE L1 0 6180 5441 423 230 119 24 chr2 178074219 178074345 -72613509 - MER5B DNA MER1_type -39 139 2 1296 259 40 24 chr2 178074594 178075049 -72612805 - MLT1C LTR MaLR 0 467 6 2331 164 74 74 chr2 178075162 178075826 -72612028 + L1MA10 LINE L1 5658 6321 -13 258 306 71 0 chr2 178077048 178077146 -72610708 + L2 LINE L2 3200 3304 -9 274 264 72 16 chr2 178077315 178077440 -72610414 + L1MC/D LINE L1 5357 5488 -2320 257 224 103 39 chr2 178077672 178077828 -72610026 + L1MC/D LINE L1 5742 5907 -1901 207 69 0 0 chr2 178077863 178077892 -72609962 + (TG)n Simple_repeat Simple_repeat 2 30 0 4523 169 34 9 chr2 178077940 178079675 -72608179 + L1PA16 LINE L1 4125 5907 -259 * 5780 167 10 7 chr2 178079673 178080691 -72607163 + MSTA-int LTR MaLR 631 1651 0 2234 133 24 89 chr2 178080691 178080864 -72606990 + MSTA LTR MaLR 1 184 -244 4412 75 0 42 chr2 178080864 178081491 -72606363 + L1PA8 LINE L1 5557 6157 -15 2234 133 24 89 chr2 178081491 178081775 -72606079 + MSTA LTR MaLR 184 428 0 1796 161 111 11 chr2 178081958 178082318 -72605536 + MSTD LTR MaLR 1 396 0 6266 135 66 18 chr2 178082433 178083607 -72604247 + Tigger3b DNA MER2_type 1 1230 -1 286 270 79 0 chr2 178083710 178083799 -72604055 - L2 LINE L2 0 3313 3218 542 299 79 41 chr2 178083879 178084170 -72603684 - L2 LINE L2 -88 3225 2924 915 249 92 48 chr2 178084182 178084540 -72603314 + MLT1A2 LTR MaLR 1 374 0 937 273 196 48 chr2 178084548 178084644 -72603210 - L2 LINE L2 -774 2540 2460 261 0 0 0 chr2 178084644 178084673 -72603181 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 937 273 196 48 chr2 178084673 178085332 -72602522 - L2 LINE L2 -854 2460 1673 2174 107 10 0 chr2 178085368 178085667 -72602187 - AluSx SINE Alu -5 307 6 625 206 0 0 chr2 178085761 178085868 -72601986 - FLAM_A SINE Alu -35 107 1 722 165 59 80 chr2 178085873 178086212 -72601642 - L1MC5 LINE L1 -176 7785 7454 769 176 15 27 chr2 178086260 178086465 -72601389 - MLT1A1 LTR MaLR 0 365 177 228 229 0 0 chr2 178086474 178086522 -72601332 + MSTD LTR MaLR 15 62 -334 352 183 56 0 chr2 178086528 178086599 -72601255 - MLT1A1 LTR MaLR -321 75 1 1401 239 70 61 chr2 178086599 178087269 -72600585 - L1MC5 LINE L1 -545 7416 6741 478 241 241 12 chr2 178087270 178087440 -72600414 - L2 LINE L2 -1601 1713 1505 193 331 55 41 chr2 178089452 178089597 -72598257 - L2 LINE L2 -646 2668 2522 234 336 131 30 chr2 178089654 178089990 -72597864 - L2 LINE L2 -1190 2124 1755 429 217 171 68 chr2 178090096 178090580 -72597274 + MLT1G LTR MaLR 20 555 0 799 236 116 25 chr2 178093137 178093421 -72594433 + LTR16A LTR ERVL 121 430 -20 4247 166 34 88 chr2 178094067 178095200 -72592654 - MER11C LTR ERVK 0 1071 1 27 0 0 0 chr2 178096068 178096095 -72591759 + AT_rich Low_complexity Low_complexity 1 27 0 936 256 72 31 chr2 178096238 178096624 -72591230 - L1ME3A LINE L1 -12 6158 5757 950 178 68 0 chr2 178096666 178096857 -72590997 + L1PB4 LINE L1 5946 6149 -7 921 164 88 40 chr2 178096998 178097272 -72590582 + MER33 DNA MER1_type 2 288 -36 396 0 0 0 chr2 178097337 178097381 -72590473 + (TTA)n Simple_repeat Simple_repeat 2 45 0 239 200 100 25 chr2 178099037 178099117 -72588737 - MIR3 SINE MIR -4 204 119 865 165 55 0 chr2 178099881 178100045 -72587809 - MER20 DNA MER1_type 0 219 47 188 122 24 0 chr2 178100874 178100915 -72586939 + (TA)n Simple_repeat Simple_repeat 2 43 0 904 304 62 30 chr2 178102330 178102732 -72585122 + L2 LINE L2 2895 3309 -4 2240 82 0 14 chr2 178104405 178104699 -72583155 + AluY SINE Alu 1 290 -21 270 0 0 0 chr2 178104702 178104732 -72583122 + (TA)n Simple_repeat Simple_repeat 2 31 0 312 233 56 0 chr2 178108010 178108100 -72579754 + MER112 DNA MER1_type 5 99 -161 2367 87 0 31 chr2 178108765 178109087 -72578767 - AluSx SINE Alu 0 312 1 226 304 29 0 chr2 178109170 178109239 -72578615 - L2 LINE L2 -1 3312 3242 581 262 45 19 chr2 178109836 178109939 -72577915 + L1M4 LINE L1 4981 5080 -1066 2182 94 10 42 chr2 178109939 178110248 -72577606 - AluSg SINE Alu -11 299 1 581 262 45 19 chr2 178110248 178110457 -72577397 + L1M4 LINE L1 5080 5301 -845 879 112 0 0 chr2 178110739 178110873 -72576981 + (TCC)n Simple_repeat Simple_repeat 3 136 0 606 134 0 71 chr2 178110873 178110974 -72576880 - FLAM_A SINE Alu -216 95 1 352 289 37 68 chr2 178112358 178112548 -72575306 + MIR SINE MIR 29 212 -50 227 371 34 11 chr2 178113671 178113760 -72574094 + L3 LINE CR1 1350 1440 -137 268 261 92 23 chr2 178114164 178114416 -72573438 - L1ME3A LINE L1 -342 5779 5503 326 263 117 44 chr2 178114688 178114722 -72573132 - L1ME4a LINE L1 -200 5921 5891 2482 71 0 7 chr2 178114722 178115032 -72572822 - AluY SINE Alu -3 308 1 326 263 117 44 chr2 178115032 178115313 -72572541 - L1ME4a LINE L1 -230 5891 5583 389 226 214 19 chr2 178115505 178115664 -72572190 - MER20 DNA MER1_type -5 214 25 201 321 71 12 chr2 178116653 178116737 -72571117 + L2 LINE L2 3225 3313 0 203 358 46 37 chr2 178117226 178117335 -72570519 - L2 LINE L2 -14 3258 3149 503 246 148 44 chr2 178117387 178117590 -72570264 + MIR SINE MIR 36 259 -3 24 0 0 0 chr2 178118274 178118298 -72569556 + AT_rich Low_complexity Low_complexity 1 24 0 232 57 29 0 chr2 178119130 178119165 -72568689 - tRNA-Cys-TGC tRNA tRNA -38 37 2 732 96 0 0 chr2 178119329 178119433 -72568421 - L1PB1 LINE L1 -7 6144 6041 21 36 0 0 chr2 178121952 178121980 -72565874 + GC_rich Low_complexity Low_complexity 1 28 0 396 290 132 69 chr2 178121980 178122442 -72565412 + L1M2 LINE L1 591 1081 -5768 983 163 11 11 chr2 178122626 178122810 -72565044 + L1PA16 LINE L1 5736 5919 -247 398 293 268 0 chr2 178123589 178123794 -72564060 + MIR SINE MIR 2 261 -1 360 0 0 0 chr2 178124088 178124128 -72563726 + (TG)n Simple_repeat Simple_repeat 2 41 0 212 184 0 0 chr2 178124128 178124166 -72563688 + (TA)n Simple_repeat Simple_repeat 2 39 0 8744 77 0 1 chr2 178125192 178126390 -72561464 - L1P LINE L1 -2927 3219 2023 351 217 0 0 chr2 178126391 178126474 -72561380 - L1P LINE L1 -4078 2068 1986 189 250 0 0 chr2 178126667 178126727 -72561127 + (TATATG)n Simple_repeat Simple_repeat 4 63 0 338 266 115 106 chr2 178126765 178127321 -72560533 - L1M4 LINE L1 -2629 3517 2957 25 0 0 0 chr2 178130241 178130266 -72557588 + AT_rich Low_complexity Low_complexity 1 25 0 537 345 99 22 chr2 178130504 178130948 -72556906 - MLT1K LTR MaLR 0 588 111 25 31 0 0 chr2 178131210 178131242 -72556612 + AT_rich Low_complexity Low_complexity 1 32 0 190 365 73 30 chr2 178133797 178134030 -72553824 - L2 LINE L2 -346 2968 2726 42 86 0 0 chr2 178134131 178134236 -72553618 + AT_rich Low_complexity Low_complexity 1 105 0 1319 217 162 59 chr2 178134363 178134852 -72553002 - L1ME3A LINE L1 -12 6158 5620 233 182 18 0 chr2 178135550 178135605 -72552249 + GA-rich Low_complexity Low_complexity 2 57 0 5111 174 47 27 chr2 178135972 178136146 -72551708 + L1MC2 LINE L1 4921 5090 -1254 2492 53 0 0 chr2 178136146 178136445 -72551409 - AluY SINE Alu -12 299 1 5111 174 47 27 chr2 178136445 178137675 -72550179 + L1MC2 LINE L1 5090 6337 -7 382 259 268 0 chr2 178137834 178138039 -72549815 - MIR SINE MIR -1 261 2 208 298 170 35 chr2 178138364 178138535 -72549319 + MIR3 SINE MIR 7 200 -8 264 224 0 0 chr2 178139708 178139775 -72548079 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 3216 283 92 27 chr2 178140287 178141774 -72546080 + L1MC4a LINE L1 6101 7683 -125 630 220 21 32 chr2 178141784 178141970 -72545884 + L1MC4 LINE L1 7829 8012 -30 188 328 96 18 chr2 178142188 178142445 -72545409 + L2 LINE L2 2775 3059 -254 388 179 13 0 chr2 178142520 178142598 -72545256 - L1MB1 LINE L1 -6 6162 6084 1033 149 0 21 chr2 178142598 178142786 -72545068 + L1MB1 LINE L1 5760 5943 -225 2815 16 0 0 chr2 178143141 178143450 -72544404 - AluYb8 SINE Alu -9 309 1 1076 276 84 18 chr2 178146231 178146720 -72541134 - LTR33 LTR ERVL 0 521 1 353 346 49 16 chr2 178146996 178147181 -72540673 - L2 LINE L2 -528 2786 2596 240 326 99 7 chr2 178147301 178147442 -72540412 + L2 LINE L2 2461 2614 -700 1111 178 33 9 chr2 178148153 178148366 -72539488 - MER20 DNA MER1_type -1 218 1 538 246 126 11 chr2 178148594 178148769 -72539085 + MIR SINE MIR 18 212 -50 189 283 22 0 chr2 178149400 178149446 -72538408 + L2 LINE L2 2925 2971 -342 448 299 29 7 chr2 178150810 178150947 -72536907 + MIR3 SINE MIR 62 201 -7 390 305 133 24 chr2 178150959 178151169 -72536685 + MIR SINE MIR 28 260 -2 472 226 10 0 chr2 178153370 178153472 -72534382 - MER5A DNA MER1_type -78 111 9 319 257 43 68 chr2 178153492 178153670 -72534184 + MIR SINE MIR 40 216 -46 268 331 21 42 chr2 178154058 178154200 -72533654 - MIR3 SINE MIR -59 149 11 382 328 58 6 chr2 178155549 178155723 -72532131 - MIR SINE MIR 0 262 80 183 229 0 0 chr2 178155983 178156018 -72531836 - MIR SINE MIR -106 102 68 288 366 120 17 chr2 178156326 178156501 -72531353 - L2 LINE L2 -4 3268 3076 880 312 40 15 chr2 178156893 178157217 -72530637 - L3 LINE CR1 -25 1552 1221 369 0 0 0 chr2 178158388 178158429 -72529425 + (TG)n Simple_repeat Simple_repeat 2 42 0 302 232 21 21 chr2 178159328 178159423 -72528431 + (CA)n Simple_repeat Simple_repeat 2 96 0 294 286 0 0 chr2 178159655 178159732 -72528122 + (CA)n Simple_repeat Simple_repeat 2 78 0 225 0 0 0 chr2 178159773 178159798 -72528056 + (CA)n Simple_repeat Simple_repeat 2 26 0 2175 274 119 21 chr2 178160908 178161440 -72526414 - L2 LINE L2 -490 2824 2345 180 0 0 0 chr2 178161440 178161460 -72526394 + (TG)n Simple_repeat Simple_repeat 2 21 0 2175 274 119 21 chr2 178161460 178161811 -72526043 - L2 LINE L2 -969 2345 1855 227 253 53 0 chr2 178162440 178162515 -72525339 - L1ME4a LINE L1 -43 6078 6000 711 296 61 6 chr2 178163364 178163725 -72524129 - L1ME4a LINE L1 -232 5889 5509 21 0 0 0 chr2 178164053 178164074 -72523780 + AT_rich Low_complexity Low_complexity 1 21 0 404 345 64 25 chr2 178164216 178164668 -72523186 + L1ME4a LINE L1 4954 5427 -694 4928 179 24 6 chr2 178164761 178166621 -72521233 - L1PA16 LINE L1 -109 6057 4175 771 114 35 0 chr2 178166611 178166725 -72521129 - L1PA15-16 LINE L1 -6731 118 1 * 304 283 64 86 chr2 178166801 178167161 -72520693 + L1ME4a LINE L1 5767 6118 -3 2338 54 0 0 chr2 178169132 178169411 -72518443 + AluY SINE Alu 1 279 -32 225 0 0 0 chr2 178169411 178169436 -72518418 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 237 65 0 0 chr2 178169507 178169538 -72518316 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 2504 77 0 0 chr2 178169539 178169850 -72518004 - AluY SINE Alu 0 311 1 1942 109 56 0 chr2 178169881 178170148 -72517706 - AluSx SINE Alu -30 282 1 603 271 119 53 chr2 178170164 178170636 -72517218 - L1ME3A LINE L1 -287 5883 5381 371 289 181 0 chr2 178170657 178170806 -72517048 + MIR SINE MIR 6 181 -81 387 255 75 46 chr2 178171216 178171522 -72516332 - L1ME3A LINE L1 -817 5329 5015 701 232 116 20 chr2 178171698 178171896 -72515958 - MIR SINE MIR 0 262 46 24 32 0 0 chr2 178171921 178171952 -72515902 + AT_rich Low_complexity Low_complexity 1 31 0 901 285 166 19 chr2 178172025 178172488 -72515366 - MLT1G1 LTR MaLR 0 595 65 190 346 138 8 chr2 178172533 178172663 -72515191 - L2 LINE L2 -224 3048 2902 902 267 42 0 chr2 178172730 178172970 -72514884 - MIR SINE MIR 0 262 13 21 0 0 0 chr2 178173962 178173983 -72513871 + AT_rich Low_complexity Low_complexity 1 21 0 658 269 64 0 chr2 178174266 178174437 -72513417 + MIR SINE MIR 15 196 -66 238 336 192 14 chr2 178175275 178175421 -72512433 + L3b LINE CR1 1248 1419 -164 212 343 56 37 chr2 178175802 178175910 -72511944 - L2 LINE L2 -36 3236 3127 431 278 99 47 chr2 178176406 178176770 -72511084 + L1MC5 LINE L1 7531 7913 -48 22 56 0 0 chr2 178176905 178176941 -72510913 + AT_rich Low_complexity Low_complexity 1 36 0 456 314 16 2 chr2 178177751 178177913 -72509941 - MIR SINE MIR -64 144 18 22 35 0 0 chr2 178178601 178178630 -72509224 + AT_rich Low_complexity Low_complexity 1 29 0 3236 214 98 51 chr2 178178921 178180276 -72507578 + L1MC5 LINE L1 6497 7911 -50 410 299 108 12 chr2 178180438 178180605 -72507249 - MIR SINE MIR -5 257 75 242 178 41 41 chr2 178182527 178182600 -72505254 + L2 LINE L2 2193 2265 -1049 24 53 0 0 chr2 178183154 178183192 -72504662 + AT_rich Low_complexity Low_complexity 1 38 0 1811 155 61 22 chr2 178183735 178184096 -72503758 - THE1C LTR MaLR 0 375 1 255 360 56 16 chr2 178184204 178184381 -72503473 + MIR3 SINE MIR 5 186 -59 238 346 176 7 chr2 178184443 178184596 -72503258 + MER5A DNA MER1_type 7 185 -4 190 27 0 81 chr2 178184617 178184654 -72503200 + (TTCCC)n Simple_repeat Simple_repeat 3 36 0 2423 84 3 3 chr2 178184789 178185098 -72502756 + AluSq SINE Alu 1 309 -4 941 185 60 26 chr2 178185284 178185402 -72502452 + MER96B DNA MER1_type? 2 114 -303 2038 126 10 17 chr2 178185402 178185703 -72502151 + AluSq SINE Alu 1 299 -14 941 185 60 26 chr2 178185703 178185816 -72502038 + MER96B DNA MER1_type? 114 241 -176 480 174 143 0 chr2 178185819 178185917 -72501937 - MER96B DNA MER1_type? -305 112 1 507 276 22 0 chr2 178186613 178186747 -72501107 - MIR3 SINE MIR -14 194 58 189 350 62 0 chr2 178186995 178187075 -72500779 + MER5A DNA MER1_type 87 171 -18 201 192 0 39 chr2 178187021 178187073 -72500781 - MER5B DNA MER1_type -108 70 21 189 171 0 0 chr2 178189238 178189273 -72498581 + (TG)n Simple_repeat Simple_repeat 2 36 0 26 0 0 0 chr2 178190109 178190135 -72497719 + AT_rich Low_complexity Low_complexity 1 26 0 375 316 97 58 chr2 178190135 178190464 -72497390 + L1ME LINE L1 5057 5398 -748 588 267 139 0 chr2 178190535 178190715 -72497139 + L1ME LINE L1 5491 5695 -426 180 152 0 0 chr2 178190746 178190779 -72497075 + A-rich Low_complexity Low_complexity 1 33 0 5583 129 52 9 chr2 178191146 178192068 -72495786 - Tigger1 DNA MER2_type 0 2418 1457 544 245 126 75 chr2 178192100 178192394 -72495460 - L1ME3A LINE L1 -9 6161 5853 1570 253 72 32 chr2 178192424 178192981 -72494873 - L1ME3A LINE L1 -427 5743 5210 10954 165 7 11 chr2 178192981 178195812 -72492042 - L1PA14 LINE L1 -2 6159 3326 1570 253 72 32 chr2 178195812 178196397 -72491457 - L1ME3A LINE L1 -960 5210 4561 298 226 16 0 chr2 178196446 178196508 -72491346 - MER94 DNA DNA 0 134 72 598 137 17 171 chr2 178197362 178197537 -72490317 + MER5B DNA MER1_type 1 148 -30 21 57 0 0 chr2 178197537 178197572 -72490282 + AT_rich Low_complexity Low_complexity 1 35 0 541 170 0 2 chr2 178197572 178197685 -72490169 - L1MA8 LINE L1 -47 6247 6142 658 333 68 45 chr2 178197687 178198287 -72489567 + L2 LINE L2 2438 3067 -205 267 241 52 0 chr2 178201673 178201731 -72486123 - L2 LINE L2 0 3313 3253 211 330 87 10 chr2 178201945 178202048 -72485806 + L2 LINE L2 2895 3005 -267 499 311 140 6 chr2 178202390 178202554 -72485300 - MER5A DNA MER1_type 0 189 4 232 310 239 7 chr2 178203369 178203511 -72484343 + MER5B DNA MER1_type 1 175 -3 329 246 0 61 chr2 178203571 178203686 -72484168 + MIR SINE MIR 54 163 -45 243 140 0 20 chr2 178205018 178205068 -72482786 + MADE1 DNA Mariner 2 50 -30 183 263 158 13 chr2 178205133 178205209 -72482645 - MIR3 SINE MIR -11 197 111 22 56 0 0 chr2 178205468 178205504 -72482350 + AT_rich Low_complexity Low_complexity 1 36 0 600 303 51 5 chr2 178205617 178205812 -72482042 + MIR SINE MIR 29 232 -30 23 0 0 0 chr2 178205849 178205872 -72481982 + AT_rich Low_complexity Low_complexity 1 23 0 380 298 155 19 chr2 178206650 178206811 -72481043 - MER5A DNA MER1_type -1 188 6 1521 214 3 7 chr2 178208056 178208360 -72479494 - AluJo SINE Alu -9 303 1 1014 298 40 9 chr2 178208946 178209268 -72478586 + L3 LINE CR1 1221 1552 -25 200 343 14 0 chr2 178209655 178209725 -72478129 - L2 LINE L2 -14 3258 3188 2209 107 7 3 chr2 178211993 178212293 -72475561 + AluSc SINE Alu 1 301 -8 239 206 44 15 chr2 178212328 178212396 -72475458 + (CA)n Simple_repeat Simple_repeat 2 71 0 197 170 55 24 chr2 178212438 178212603 -72475251 + (CA)n Simple_repeat Simple_repeat 1 170 0 458 363 30 0 chr2 178212704 178212839 -72475015 - L2 LINE L2 0 3272 3134 22 0 0 0 chr2 178215890 178215912 -72471942 + AT_rich Low_complexity Low_complexity 1 22 0 293 327 81 73 chr2 178216281 178216639 -72471215 - L2 LINE L2 0 3272 2912 228 224 0 0 chr2 178217325 178217374 -72470480 + (CA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr2 178218151 178218173 -72469681 + AT_rich Low_complexity Low_complexity 1 22 0 59 24 0 12 chr2 178218371 178218400 -72469454 + AT_rich Low_complexity Low_complexity 1 29 -54 2117 130 0 0 chr2 178218400 178218693 -72469161 + AluSx SINE Alu 1 293 -19 59 24 0 12 chr2 178218693 178218747 -72469107 + AT_rich Low_complexity Low_complexity 29 83 0 404 232 10 0 chr2 178218844 178218943 -72468911 + L1ME4a LINE L1 5808 5907 -214 1801 155 2 114 chr2 178219832 178220271 -72467583 + MLT1B LTR MaLR 1 390 0 324 0 0 0 chr2 178220583 178220619 -72467235 + (TG)n Simple_repeat Simple_repeat 1 36 0 358 221 64 36 chr2 178221350 178221490 -72466364 + L1MD1 LINE L1 1963 2106 -4434 711 221 134 69 chr2 178221495 178221757 -72466097 - MLT2B1 LTR ERVL -5 515 237 390 195 12 0 chr2 178221778 178221860 -72465994 - MLT2B1 LTR ERVL -437 83 1 262 203 62 0 chr2 178221863 178221927 -72465927 + L1MD1 LINE L1 2108 2175 -4365 5660 226 59 37 chr2 178221957 178223446 -72464408 + L1MD1 LINE L1 2289 3744 -2796 1887 156 3 0 chr2 178223446 178223734 -72464120 + AluSx SINE Alu 1 289 -23 5660 226 59 37 chr2 178223734 178224160 -72463694 + L1MD1 LINE L1 3744 4159 -2381 2180 123 0 7 chr2 178224160 178224468 -72463386 + AluSx SINE Alu 3 308 -4 5660 226 59 37 chr2 178224468 178224770 -72463084 + L1MD1 LINE L1 4159 4453 -2087 1587 132 20 92 chr2 178224770 178225065 -72462789 + AluJb SINE Alu 21 294 -18 5660 226 59 37 chr2 178225065 178225778 -72462076 + L1MD1 LINE L1 4453 5413 -1127 615 260 63 32 chr2 178225793 178226078 -72461776 - MLT1D LTR MaLR -191 314 21 1509 170 32 7 chr2 178226087 178226370 -72461484 + L1MD1 LINE L1 6167 6456 -180 333 68 0 0 chr2 178226389 178226433 -72461421 + (CA)n Simple_repeat Simple_repeat 1 44 0 355 276 0 0 chr2 178226434 178226532 -72461322 + L1MD2 LINE L1 6153 6250 -109 543 45 0 0 chr2 178226532 178226599 -72461255 + AluY SINE Alu 229 295 -14 364 218 69 0 chr2 178226602 178226703 -72461151 + L1MD1 LINE L1 6528 6635 -1 342 315 119 21 chr2 178226933 178227076 -72460778 - L2 LINE L2 -184 3088 2932 264 410 64 6 chr2 178227508 178227664 -72460190 - L2 LINE L2 -246 3026 2862 603 259 154 64 chr2 178227731 178228057 -72459797 - MLT1H LTR MaLR -50 499 131 1722 176 5 88 chr2 178228057 178228455 -72459399 + MLT1A1 LTR MaLR 1 365 0 603 259 154 64 chr2 178228455 178228518 -72459336 - MLT1H LTR MaLR -418 131 75 41339 59 5 8 chr2 178228550 178234713 -72453141 + L1PA5 LINE L1 12 6153 -1 1235 191 44 85 chr2 178238620 178238961 -72448893 + MER46C DNA MER2_type 4 330 -8 674 172 48 32 chr2 178244083 178244269 -72443585 + MER53 DNA DNA 1 189 0 21 36 0 0 chr2 178244985 178245013 -72442841 + AT_rich Low_complexity Low_complexity 1 28 0 596 250 204 0 chr2 178247473 178247645 -72440209 - MIR SINE MIR -53 209 3 * 770 314 175 62 chr2 178247645 178248667 -72439187 + L3 LINE CR1 434 1570 -7 601 262 15 58 chr2 178248729 178248927 -72438927 + MIR SINE MIR 18 207 -55 192 250 0 0 chr2 178249307 178249355 -72438499 - MIR SINE MIR -56 206 159 2025 120 7 3 chr2 178249662 178249962 -72437892 - AluSx SINE Alu -11 301 1 27 29 0 0 chr2 178250556 178250590 -72437264 + AT_rich Low_complexity Low_complexity 1 34 0 7695 19 0 0 chr2 178250610 178251829 -72436025 - L1PA2 LINE L1 -2 6153 4931 773 256 91 91 chr2 178252143 178252651 -72435203 + L1MC4a LINE L1 5421 5928 -1880 183 222 0 0 chr2 178252652 178252697 -72435157 + (TATG)n Simple_repeat Simple_repeat 1 45 0 2390 58 0 3 chr2 178252847 178253139 -72434715 - AluY SINE Alu -10 301 11 181 282 0 0 chr2 178254799 178254838 -72433016 + MER5B DNA MER1_type 7 45 -133 825 228 0 0 chr2 178254838 178255009 -72432845 - FRAM SINE Alu -5 171 1 313 252 176 17 chr2 178255010 178255129 -72432725 + MER5B DNA MER1_type 41 178 0 426 296 134 16 chr2 178255258 178255444 -72432410 + MIR SINE MIR 29 236 -26 306 263 158 9 chr2 178256372 178256486 -72431368 + MER94 DNA DNA 4 134 0 2168 140 30 21 chr2 178256615 178256987 -72430867 - THE1C LTR MaLR 0 375 1 262 413 39 0 chr2 178258155 178258310 -72429544 + MIR3 SINE MIR 17 177 -31 32 26 0 0 chr2 178259402 178259441 -72428413 + AT_rich Low_complexity Low_complexity 1 39 0 210 297 57 108 chr2 178259660 178259872 -72427982 + MIR SINE MIR 10 210 -52 425 299 81 0 chr2 178260069 178260243 -72427611 - MIR SINE MIR -16 246 59 22 0 0 0 chr2 178260258 178260280 -72427574 + AT_rich Low_complexity Low_complexity 1 22 0 445 147 0 39 chr2 178260707 178260836 -72427018 + (TA)n Simple_repeat Simple_repeat 1 124 0 325 248 19 9 chr2 178261140 178261245 -72426609 + (TA)n Simple_repeat Simple_repeat 2 107 0 21 0 0 0 chr2 178262313 178262334 -72425520 + AT_rich Low_complexity Low_complexity 1 21 0 2095 123 0 0 chr2 178262334 178262619 -72425235 - AluSx SINE Alu -23 289 5 23 33 0 0 chr2 178262820 178262850 -72425004 + AT_rich Low_complexity Low_complexity 1 30 0 303 286 117 51 chr2 178262874 178263147 -72424707 - L1ME2 LINE L1 -66 6167 5877 287 29 0 0 chr2 178263157 178263191 -72424663 - MADE1 DNA Mariner -46 34 1 278 288 96 8 chr2 178263214 178263339 -72424515 - L1ME2 LINE L1 -392 5847 5712 223 284 148 0 chr2 178263416 178263497 -72424357 + L2 LINE L2 3221 3313 0 1061 272 74 31 chr2 178263500 178265029 -72422825 - L1ME2 LINE L1 -585 5654 3953 279 254 153 24 chr2 178265056 178265265 -72422589 - L1ME2 LINE L1 -2368 3847 3612 365 304 38 22 chr2 178265291 178265475 -72422379 - L1ME2 LINE L1 -2687 3528 3342 238 226 108 10 chr2 178265476 178265578 -72422276 - L1ME2 LINE L1 -3710 2505 2394 1431 206 7 31 chr2 178265581 178265867 -72421987 + AluJo SINE Alu 1 279 -33 306 235 53 82 chr2 178265916 178266086 -72421768 - L1ME2 LINE L1 -4048 2348 2184 620 159 43 12 chr2 178266090 178266253 -72421601 + C-rich Low_complexity Low_complexity 1 168 0 189 0 0 0 chr2 178267678 178267699 -72420155 + (CA)n Simple_repeat Simple_repeat 2 22 0 598 158 92 17 chr2 178267808 178267928 -72419926 - FLAM_C SINE Alu -3 130 2 233 176 47 12 chr2 178268100 178268185 -72419669 + (TA)n Simple_repeat Simple_repeat 2 89 0 229 193 46 18 chr2 178268219 178268328 -72419526 + (TA)n Simple_repeat Simple_repeat 2 113 0 1597 188 27 10 chr2 178268901 178269199 -72418655 - AluJo SINE Alu -9 303 1 225 132 0 0 chr2 178269211 178269249 -72418605 + (TC)n Simple_repeat Simple_repeat 1 38 0 868 277 159 90 chr2 178269554 178270107 -72417747 - MLT1G LTR MaLR -4 586 1 30 45 0 0 chr2 178270863 178270907 -72416947 + AT_rich Low_complexity Low_complexity 1 44 0 1980 122 27 17 chr2 178271688 178271984 -72415870 - AluSx SINE Alu -11 301 3 593 289 74 11 chr2 178272186 178272417 -72415437 + MIR SINE MIR 12 252 -10 603 286 153 32 chr2 178272913 178273350 -72414504 - L2 LINE L2 0 3313 2824 2397 181 2 14 chr2 178273415 178273836 -72414018 - MER47B DNA MER2_type -1 417 2 511 286 156 0 chr2 178273891 178274045 -72413809 - MER5A DNA MER1_type -3 186 9 213 403 39 17 chr2 178274056 178274237 -72413617 - L2 LINE L2 -722 2592 2408 183 323 31 0 chr2 178274285 178274381 -72413473 - L2 LINE L2 -1945 1369 1271 852 146 39 98 chr2 178274583 178274788 -72413066 - LTR32 LTR ERVL 0 471 279 306 121 52 17 chr2 178274792 178274850 -72413004 - LTR32 LTR ERVL -133 338 279 1715 145 26 22 chr2 178274863 178275174 -72412680 - LTR32 LTR ERVL -147 324 13 553 278 45 15 chr2 178275174 178275372 -72412482 - HERVL32 LTR ERVL 0 3418 3215 323 263 11 11 chr2 178275461 178275556 -72412298 - PABL_B-int LTR ERV1 -452 6670 6576 7832 233 22 62 chr2 178277359 178278207 -72409647 - HERVL32 LTR ERVL -989 2429 1548 1506 152 134 27 chr2 178278207 178278536 -72409318 - THE1B LTR MaLR 0 364 1 7832 233 22 62 chr2 178278536 178280219 -72407635 - HERVL32 LTR ERVL -1870 1548 1 1853 155 115 42 chr2 178280219 178280645 -72407209 - LTR32 LTR ERVL 0 471 15 822 235 51 18 chr2 178280739 178280956 -72406898 + MER58A DNA MER1_type 1 224 0 570 338 137 5 chr2 178281150 178281543 -72406311 - L2 LINE L2 -2577 737 293 324 242 75 25 chr2 178282181 178282342 -72405512 - L1ME4a LINE L1 -1 6120 5952 233 285 77 8 chr2 178282437 178282567 -72405287 - L1ME4a LINE L1 -296 5825 5687 258 360 29 47 chr2 178282568 178282740 -72405114 + L2 LINE L2 2690 2858 -456 1108 285 142 19 chr2 178283053 178283801 -72404053 - L2 LINE L2 -1 3312 2451 559 29 0 0 chr2 178284490 178284559 -72403295 - L1PA5 LINE L1 -6 6148 6080 323 264 181 32 chr2 178285115 178285270 -72402584 + MIR SINE MIR 85 262 0 2167 113 3 3 chr2 178285608 178285918 -72401936 - AluY SINE Alu -1 310 1 183 146 0 0 chr2 178286568 178286609 -72401245 + (TG)n Simple_repeat Simple_repeat 2 42 0 450 204 28 9 chr2 178286643 178286751 -72401103 + L1MB3 LINE L1 5987 6096 -87 996 151 22 5 chr2 178287357 178287542 -72400312 + L1MB3 LINE L1 5987 6174 -9 3187 36 26 0 chr2 178288457 178288845 -72399009 - L1PA5 LINE L1 -1 6153 5756 1768 165 31 20 chr2 178289063 178289420 -72398434 - THE1C LTR MaLR 0 375 15 207 0 0 0 chr2 178290300 178290323 -72397531 + (A)n Simple_repeat Simple_repeat 1 23 0 1837 198 59 59 chr2 178290401 178291382 -72396472 - L1MB8 LINE L1 -60 6118 5072 351 113 0 0 chr2 178291640 178291693 -72396161 + (TCC)n Simple_repeat Simple_repeat 2 54 0 2268 117 3 3 chr2 178291693 178292002 -72395852 - AluSx SINE Alu -3 309 1 22 0 0 0 chr2 178292527 178292549 -72395305 + AT_rich Low_complexity Low_complexity 1 22 0 430 216 45 11 chr2 178293596 178293684 -72394170 - MER5A DNA MER1_type -84 105 15 384 341 0 0 chr2 178294306 178294432 -72393422 - MIR3 SINE MIR -24 184 59 1810 142 33 3 chr2 178294448 178294778 -72393076 + L1MA4 LINE L1 5952 6291 -9 33 0 0 0 chr2 178294778 178294811 -72393043 + AT_rich Low_complexity Low_complexity 1 33 0 541 181 11 73 chr2 178294816 178294993 -72392861 + MER53 DNA DNA 21 186 -3 234 321 113 19 chr2 178295084 178295190 -72392664 + L2 LINE L2 3192 3307 -6 413 263 263 0 chr2 178295823 178295994 -72391860 - MIR SINE MIR 0 262 47 1138 216 57 4 chr2 178296097 178296324 -72391530 - MER8 DNA MER2_type 0 239 1 911 264 104 59 chr2 178296510 178296823 -72391031 - LTR33 LTR ERVL -2 519 175 387 0 0 0 chr2 178296823 178296866 -72390988 + (CA)n Simple_repeat Simple_repeat 2 44 0 911 264 104 59 chr2 178296866 178297044 -72390810 - LTR33 LTR ERVL -346 175 6 977 124 6 17 chr2 178297798 178297976 -72389878 + L1MA8 LINE L1 5973 6148 -143 273 29 0 0 chr2 178298125 178298159 -72389695 + (TTG)n Simple_repeat Simple_repeat 2 35 0 692 159 0 0 chr2 178298189 178298296 -72389558 - FLAM_A SINE Alu -34 108 2 265 301 41 0 chr2 178298635 178298708 -72389146 - MIR SINE MIR -76 186 111 490 294 49 25 chr2 178298797 178299001 -72388853 - MIR SINE MIR -41 221 13 213 244 0 0 chr2 178300079 178300124 -72387730 - MIR3 SINE MIR -53 155 111 196 311 33 0 chr2 178300947 178301008 -72386846 - L2 LINE L2 -20 3293 3231 2292 104 0 0 chr2 178302874 178303172 -72384682 + AluSq SINE Alu 1 298 -15 2083 93 31 10 chr2 178303254 178303545 -72384309 - AluSq SINE Alu -16 297 1 225 65 0 0 chr2 178303875 178303906 -72383948 + (TG)n Simple_repeat Simple_repeat 2 32 0 489 263 36 49 chr2 178304673 178304897 -72382957 - L1ME LINE L1 -395 5726 5506 305 267 18 69 chr2 178305634 178305806 -72382048 + MIR SINE MIR 25 187 -70 856 254 38 36 chr2 178305997 178306366 -72381488 - L1ME3A LINE L1 -7 6163 5770 806 205 19 9 chr2 178306374 178306584 -72381270 - L1ME3A LINE L1 -2144 4002 3791 354 45 0 0 chr2 178307007 178307051 -72380803 + (CAA)n Simple_repeat Simple_repeat 2 45 0 697 126 27 0 chr2 178307269 178307380 -72380474 - MER7A DNA MER2_type 0 336 223 500 191 0 0 chr2 178307379 178307484 -72380370 - MER7A DNA MER2_type -212 134 32 * 1011 266 132 18 chr2 178307936 178308376 -72379478 - MLT1J LTR MaLR 0 511 22 729 138 14 22 chr2 178309790 178309928 -72377926 - MER20 DNA MER1_type -81 138 2 534 259 43 38 chr2 178309937 178310122 -72377732 + L2 LINE L2 2543 2728 -586 1051 43 0 0 chr2 178310141 178310258 -72377596 + AluY SINE Alu 16 132 -179 2447 65 0 0 chr2 178310262 178310555 -72377299 + AluY SINE Alu 1 293 -18 2289 81 3 7 chr2 178310562 178310858 -72376996 + AluSg SINE Alu 1 295 -15 2235 156 33 23 chr2 178311231 178311661 -72376193 + Tigger2a DNA MER2_type 1 434 0 21 0 0 0 chr2 178312255 178312276 -72375578 + AT_rich Low_complexity Low_complexity 1 21 0 455 276 15 22 chr2 178312369 178312503 -72375351 + L2 LINE L2 3181 3313 0 1000 294 116 17 chr2 178313304 178313770 -72374084 - L1MEd LINE L1 -5396 723 212 1849 148 48 25 chr2 178313771 178314128 -72373726 - MLT1A1 LTR MaLR 0 365 1 3377 245 106 42 chr2 178314128 178315335 -72372519 - MLT1A1-int LTR MaLR 0 1735 452 912 278 53 8 chr2 178315550 178315795 -72372059 - MIR SINE MIR -5 257 2 1351 223 50 62 chr2 178315986 178316338 -72371516 - MER63B DNA MER1_type -626 436 88 2652 23 0 3 chr2 178316338 178316640 -72371214 - AluY SINE Alu -10 301 1 1351 223 50 62 chr2 178316640 178316726 -72371128 - MER63B DNA MER1_type -974 88 3 187 322 17 0 chr2 178317086 178317145 -72370709 + MIR SINE MIR 38 97 -111 495 216 17 119 chr2 178317158 178317334 -72370520 + MER5B DNA MER1_type 21 178 0 601 260 0 14 chr2 178317364 178317510 -72370344 + MIR SINE MIR 14 157 -105 293 282 164 27 chr2 178319866 178319976 -72367878 + L2 LINE L2 3189 3313 0 243 253 169 0 chr2 178320014 178320097 -72367757 + MIR3 SINE MIR 109 205 -3 342 239 158 53 chr2 178321791 178322075 -72365779 - L1ME4a LINE L1 -116 6005 5692 26 50 0 0 chr2 178322577 178322617 -72365237 + AT_rich Low_complexity Low_complexity 1 40 0 225 299 58 11 chr2 178322742 178322829 -72365025 + MIR3 SINE MIR 85 175 -33 2619 39 0 13 chr2 178322911 178323220 -72364634 - AluY SINE Alu -5 306 2 384 295 52 44 chr2 178323765 178324016 -72363838 + L1M4 LINE L1 3026 3278 -2868 623 146 0 0 chr2 178324163 178324259 -72363595 - MLT1C LTR MaLR 0 467 372 1349 201 75 133 chr2 178324270 178324947 -72362907 - HsTC2c DNA Tc2 -57 672 35 337 157 0 0 chr2 178325044 178325095 -72362759 + MER5A DNA MER1_type 1 51 -138 914 114 35 119 chr2 178325095 178325296 -72362558 - MLT2B3 LTR ERVL 0 554 371 32 67 0 0 chr2 178327081 178327141 -72360713 + AT_rich Low_complexity Low_complexity 1 60 0 2073 122 10 0 chr2 178327573 178327868 -72359986 + AluSq SINE Alu 1 298 -15 190 281 90 34 chr2 178328080 178328169 -72359685 + MIR3 SINE MIR 14 107 -101 343 301 144 0 chr2 178328729 178328882 -72358972 + MIR SINE MIR 50 224 -38 753 173 70 13 chr2 178329843 178329999 -72357855 + MER106B DNA MER1_type 895 1059 0 571 330 13 40 chr2 178330193 178330420 -72357434 + MIR SINE MIR 20 240 -22 228 67 0 0 chr2 178331035 178331065 -72356789 + (TC)n Simple_repeat Simple_repeat 2 31 0 508 311 129 25 chr2 178333028 178333346 -72354508 - LTR33 LTR ERVL -1 520 170 358 333 0 33 chr2 178333590 178333710 -72354144 - L2 LINE L2 -2 3311 3196 25 0 0 0 chr2 178335005 178335030 -72352824 + AT_rich Low_complexity Low_complexity 1 25 0 231 185 62 46 chr2 178336564 178336629 -72351225 - L2 LINE L2 0 3313 3248 183 333 77 49 chr2 178336856 178337039 -72350815 + L2 LINE L2 1323 1510 -1804 1322 237 93 29 chr2 178337188 178338350 -72349504 - L1MC4 LINE L1 -181 7861 6462 386 101 14 0 chr2 178339308 178339377 -72348477 + L1MA4A LINE L1 6230 6299 -4 195 315 27 27 chr2 178340111 178340184 -72347670 - L2 LINE L2 0 3313 3241 2082 129 10 0 chr2 178340208 178340517 -72347337 - AluSq SINE Alu -1 312 1 256 310 110 7 chr2 178340518 178340673 -72347181 - L2 LINE L2 -601 2713 2543 230 236 45 11 chr2 178342285 178342374 -72345480 + MIR SINE MIR 153 244 -18 1146 244 41 9 chr2 178342785 178343139 -72344715 - L1MD2 LINE L1 -27 6139 5790 3928 231 35 14 chr2 178343142 178344117 -72343737 - Charlie1a DNA MER1_type -459 996 2 306 259 135 43 chr2 178344135 178344320 -72343534 + L3b LINE CR1 1128 1329 -254 26 0 0 0 chr2 178345071 178345097 -72342757 + AT_rich Low_complexity Low_complexity 1 26 0 316 250 67 25 chr2 178346042 178346162 -72341692 - L1MC4 LINE L1 0 8042 7918 2059 259 78 21 chr2 178346252 178347013 -72340841 - L1MC4 LINE L1 -149 7893 7090 1193 147 66 9 chr2 178347097 178347362 -72340492 - L1MA7 LINE L1 0 6312 6014 1588 198 3 29 chr2 178347400 178347713 -72340141 - AluJb SINE Alu -7 305 1 1298 237 119 62 chr2 178347721 178348366 -72339488 - L1MC4a LINE L1 -855 6953 6272 753 111 32 0 chr2 178348416 178348542 -72339312 - L1MB1 LINE L1 -1 6167 6038 340 341 65 0 chr2 178348851 178348914 -72338940 + MIR SINE MIR 2 59 -203 189 0 0 0 chr2 178348914 178348935 -72338919 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 340 341 65 0 chr2 178348935 178349009 -72338845 + MIR SINE MIR 59 148 -114 3992 212 77 45 chr2 178349986 178351104 -72336750 + MER69B DNA AcHobo 12 1165 -61 6992 55 11 1 chr2 178351104 178351481 -72336373 - L1PA6 LINE L1 0 6154 5782 2252 97 0 40 chr2 178351481 178351802 -72336052 - AluY SINE Alu -3 308 1 6992 55 11 1 chr2 178351802 178352835 -72335019 - L1PA6 LINE L1 -372 5782 4748 28448 106 10 16 chr2 178352850 178357096 -72330758 - L1PA6 LINE L1 -1910 4236 15 346 232 0 24 chr2 178357096 178357178 -72330676 + MER69B DNA AcHobo 1144 1223 -3 1316 228 66 64 chr2 178357462 178357998 -72329856 + L1MC5 LINE L1 6715 7250 -736 1289 226 77 66 chr2 178358077 178358728 -72329126 + L1MC5 LINE L1 7251 7908 -53 746 192 192 0 chr2 178358904 178359076 -72328778 + MER63A DNA MER1_type 1 205 -5 285 317 94 28 chr2 178359106 178359286 -72328568 + MIR SINE MIR 32 223 -39 440 231 59 53 chr2 178360401 178360570 -72327284 - MER112 DNA MER1_type -52 208 39 192 163 0 0 chr2 178361218 178361261 -72326593 + (TA)n Simple_repeat Simple_repeat 2 44 0 585 281 54 97 chr2 178362788 178363254 -72324600 - LTR67 LTR ERVL -3 554 109 658 279 50 5 chr2 178365031 178365232 -72322622 - MER63A DNA MER1_type 0 210 1 1501 191 15 63 chr2 178366272 178366607 -72321247 - MER92C LTR ERV1 -35 519 201 334 180 16 0 chr2 178366664 178366725 -72321129 - MIR SINE MIR -135 127 66 506 213 8 16 chr2 178368798 178368925 -72318929 + L1PB4 LINE L1 6017 6142 -14 863 237 11 0 chr2 178368937 178369123 -72318731 + MER5A DNA MER1_type 2 189 0 1818 167 0 3 chr2 178369789 178370083 -72317771 + AluJo SINE Alu 1 293 -19 1343 132 0 5 chr2 178370119 178370308 -72317546 + AluSg/x SINE Alu 105 292 -20 722 236 167 37 chr2 178370376 178370592 -72317262 - MIR SINE MIR -2 260 17 304 274 68 0 chr2 178370678 178370795 -72317059 - L1ME4a LINE L1 -1 6120 5996 236 341 81 0 chr2 178370814 178370937 -72316917 - MER5A DNA MER1_type -6 183 51 813 225 81 0 chr2 178371145 178371318 -72316536 - MER5A DNA MER1_type -1 188 2 325 284 0 0 chr2 178372258 178372339 -72315515 - L2 LINE L2 -4 3309 3229 14546 139 37 20 chr2 178372346 178374696 -72313158 + L1MA3 LINE L1 17 2407 -5158 10473 152 30 8 chr2 178374724 178377714 -72310140 + L1MA3 LINE L1 4673 7719 -5 477 0 0 0 chr2 178377754 178377807 -72310047 + (CA)n Simple_repeat Simple_repeat 2 54 0 384 277 156 7 chr2 178377889 178378030 -72309824 + MER5A DNA MER1_type 28 189 0 2195 117 3 3 chr2 178378442 178378741 -72309113 + AluSq SINE Alu 7 305 -8 1991 91 190 19 chr2 178379065 178379429 -72308425 - MSTA LTR MaLR -2 426 1 260 306 57 0 chr2 178379828 178379952 -72307902 + L1ME4a LINE L1 5986 6116 -5 33 0 0 0 chr2 178381985 178382018 -72305836 + AT_rich Low_complexity Low_complexity 1 33 0 369 279 89 65 chr2 178383294 178383541 -72304313 - MIR SINE MIR -8 254 2 1655 86 5 18 chr2 178384151 178384372 -72303482 + AluSx SINE Alu 1 218 -94 189 364 57 0 chr2 178385821 178385909 -72301945 - L2 LINE L2 -44 3228 3136 21 57 0 0 chr2 178387135 178387170 -72300684 + AT_rich Low_complexity Low_complexity 1 35 0 195 326 54 43 chr2 178387373 178387465 -72300389 + MIR SINE MIR 36 128 -80 526 168 56 19 chr2 178387485 178387592 -72300262 - MER7A DNA MER2_type -237 109 1 1366 193 32 99 chr2 178389416 178389991 -72297863 + MLT1-int LTR MaLR 7 662 -709 587 294 37 5 chr2 178390093 178390280 -72297574 + MLT1-int LTR MaLR 692 884 -487 747 176 25 33 chr2 178390403 178390574 -72297280 + MLT1E3 LTR MaLR 441 619 -5 408 114 0 89 chr2 178390782 178390861 -72296993 - AluJ/FRAM SINE Alu -10 302 231 795 189 0 50 chr2 178390869 178391028 -72296826 + AluJb SINE Alu 154 304 -8 784 243 17 0 chr2 178391679 178391852 -72296002 + AluJb SINE Alu 135 310 -2 423 220 144 8 chr2 178392773 178392891 -72294963 - MER94 DNA DNA 0 134 1 207 0 0 0 chr2 178395522 178395545 -72292309 + (TG)n Simple_repeat Simple_repeat 2 24 0 1695 142 75 33 chr2 178395688 178396048 -72291806 - THE1C LTR MaLR 0 375 1 400 350 96 5 chr2 178396265 178396462 -72291392 - MIR SINE MIR -27 235 21 271 243 82 47 chr2 178396497 178396657 -72291197 - MIR SINE MIR -69 139 6 2000 86 0 0 chr2 178398302 178398569 -72289285 + AluY SINE Alu 41 307 -4 2386 86 0 7 chr2 178399591 178399893 -72287961 - AluSg SINE Alu -10 300 1 462 252 25 57 chr2 178400058 178400217 -72287637 + MIR3 SINE MIR 7 160 -48 182 388 50 0 chr2 178400247 178400327 -72287527 - L2 LINE L2 -50 3222 3139 316 316 89 25 chr2 178400683 178400841 -72287013 - L2 LINE L2 -557 2757 2590 464 312 234 8 chr2 178401507 178401985 -72285869 + L2 LINE L2 1803 2388 -926 259 367 25 61 chr2 178402006 178402251 -72285603 + L2 LINE L2 2848 3083 -189 968 149 42 89 chr2 178402328 178402542 -72285312 + MER20 DNA MER1_type 16 219 0 498 270 71 0 chr2 178402568 178402694 -72285160 + L2 LINE L2 3137 3271 -1 352 279 227 29 chr2 178403065 178403237 -72284617 + MIR SINE MIR 51 256 -6 352 261 42 42 chr2 178403305 178403424 -72284430 - MLT1J LTR MaLR -47 464 346 1672 127 4 4 chr2 178403552 178403805 -72284049 + AluSq SINE Alu 53 305 -8 686 195 19 13 chr2 178403805 178403959 -72283895 + L1MC3 LINE L1 7630 7784 -1 308 309 0 0 chr2 178404022 178404103 -72283751 + L2 LINE L2 3189 3269 -44 213 378 0 0 chr2 178404502 178404584 -72283270 + MIR SINE MIR 48 129 -133 729 232 94 0 chr2 178404796 178404977 -72282877 - MLT1J LTR MaLR -239 272 75 189 326 0 0 chr2 178405028 178405074 -72282780 + MIR SINE MIR 205 250 -12 1280 187 68 65 chr2 178405840 178406209 -72281645 - MLT1A2 LTR MaLR -4 370 1 252 343 64 35 chr2 178406457 178406629 -72281225 - MIR SINE MIR -40 222 46 596 244 91 32 chr2 178406673 178406894 -72280960 + MIR SINE MIR 29 262 0 216 231 296 28 chr2 178408349 178408457 -72279397 + L2 LINE L2 3173 3309 -4 250 288 42 59 chr2 178410211 178410329 -72277525 + L2 LINE L2 3157 3272 0 199 389 48 16 chr2 178410325 178410451 -72277403 - L2 LINE L2 -554 2760 2631 * 233 349 106 19 chr2 178411478 178411790 -72276064 - L2 LINE L2 -994 2320 1982 22 35 0 0 chr2 178413036 178413065 -72274789 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 178413276 178413298 -72274556 + AT_rich Low_complexity Low_complexity 1 22 0 408 331 22 39 chr2 178414248 178414426 -72273428 + L2 LINE L2 3098 3272 0 367 266 73 9 chr2 178414433 178414542 -72273312 - MER115 DNA AcHobo -148 545 430 415 305 75 45 chr2 178414637 178414837 -72273017 - MER115 DNA AcHobo -415 278 73 402 274 26 9 chr2 178415354 178415467 -72272387 + MIR3 SINE MIR 69 183 -25 21 36 0 0 chr2 178415706 178415734 -72272120 + AT_rich Low_complexity Low_complexity 1 28 0 480 301 153 0 chr2 178416040 178416236 -72271618 - MIR SINE MIR -6 256 31 802 295 16 4 chr2 178417417 178417675 -72270179 + MIR SINE MIR 2 262 0 830 285 182 22 chr2 178418183 178418930 -72268924 - L2 LINE L2 0 3313 2446 319 280 43 0 chr2 178419008 178419101 -72268753 - L2 LINE L2 -24 3289 3193 2308 90 3 6 chr2 178419434 178419745 -72268109 + AluSx SINE Alu 1 310 -2 245 331 154 8 chr2 178420582 178420712 -72267142 - L2 LINE L2 -3 3269 3121 221 358 41 0 chr2 178420847 178420970 -72266884 - L2 LINE L2 -211 3061 2934 194 402 41 0 chr2 178421014 178421111 -72266743 - L2 LINE L2 -5 3267 3167 397 333 86 18 chr2 178421230 178421452 -72266402 - MIR SINE MIR 0 262 26 196 341 49 0 chr2 178421454 178421536 -72266318 - L2 LINE L2 -547 2767 2682 198 317 66 92 chr2 178421646 178421917 -72265937 - L2 LINE L2 -807 2507 2244 1152 160 5 0 chr2 178422419 178422607 -72265247 - MER5A DNA MER1_type 0 189 1 185 35 69 0 chr2 178425953 178425982 -72261872 + (CAGAGA)n Simple_repeat Simple_repeat 6 36 0 1970 188 50 26 chr2 178426528 178426986 -72260868 + L1MA9 LINE L1 5797 6265 -47 904 179 30 6 chr2 178428749 178428917 -72258937 + L1PA16 LINE L1 5976 6147 -19 523 158 58 6 chr2 178428948 178429119 -72258735 + (TA)n Simple_repeat Simple_repeat 1 180 0 21 36 0 0 chr2 178429160 178429188 -72258666 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 178429590 178429612 -72258242 + AT_rich Low_complexity Low_complexity 1 22 0 2560 228 79 52 chr2 178431164 178432010 -72255844 - L1ME3A LINE L1 -28 6142 5274 253 278 104 9 chr2 178432031 178432146 -72255708 - L1ME3A LINE L1 -1006 5140 5015 545 358 16 20 chr2 178432491 178432737 -72255117 - MIR SINE MIR -1 261 17 21 0 0 0 chr2 178432766 178432787 -72255067 + AT_rich Low_complexity Low_complexity 1 21 0 646 266 95 22 chr2 178432994 178433216 -72254638 + MIR SINE MIR 25 262 0 718 201 37 119 chr2 178433564 178433833 -72254021 + MIR SINE MIR 6 252 -10 200 29 0 59 chr2 178486055 178486089 -72201765 + (TTTTA)n Simple_repeat Simple_repeat 3 34 0 1916 134 7 0 chr2 178486098 178486373 -72201481 - AluSx SINE Alu -27 285 9 25 31 0 0 chr2 178486382 178486414 -72201440 + AT_rich Low_complexity Low_complexity 1 32 0 487 297 34 110 chr2 178488444 178488707 -72199147 + L2 LINE L2 2990 3232 -40 180 0 0 0 chr2 178488871 178488891 -72198963 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2286 92 3 3 chr2 178488900 178489206 -72198648 - AluSp SINE Alu -7 306 1 1905 156 19 32 chr2 178489935 178490314 -72197540 + MLT1A2 LTR MaLR 1 374 0 26 64 0 0 chr2 178490840 178490887 -72196967 + AT_rich Low_complexity Low_complexity 1 47 0 1955 147 0 3 chr2 178491592 178491912 -72195942 - AluSx SINE Alu 0 319 1 2107 109 30 3 chr2 178492038 178492341 -72195513 - AluSp SINE Alu -2 311 1 333 253 84 0 chr2 178492590 178492685 -72195169 - L2 LINE L2 -2 3270 3168 398 250 40 0 chr2 178493337 178493437 -72194417 - MIR SINE MIR -30 232 129 3430 240 64 23 chr2 178493526 178494522 -72193332 - L1MEc LINE L1 -5325 1071 35 23 0 0 0 chr2 178494765 178494788 -72193066 + AT_rich Low_complexity Low_complexity 1 23 0 1729 139 4 22 chr2 178494795 178495069 -72192785 - AluSx SINE Alu -43 269 1 342 311 57 48 chr2 178495247 178495456 -72192398 - MLT1K LTR MaLR -233 355 145 385 272 70 0 chr2 178495614 178495728 -72192126 + L2 LINE L2 1891 2012 -1302 524 273 199 11 chr2 178497094 178497365 -72190489 + L2 LINE L2 1785 2106 -1208 5465 142 17 22 chr2 178497404 178498883 -72188971 - L1PA16 LINE L1 -4 6162 4673 1673 147 20 42 chr2 178498883 178499189 -72188665 - AluJb SINE Alu -13 299 1 5465 142 17 22 chr2 178499189 178499212 -72188642 - L1PA16 LINE L1 -1493 4673 4651 1240 182 18 14 chr2 178499219 178499494 -72188360 + L1PA16 LINE L1 4364 4639 -1507 980 319 167 26 chr2 178499560 178500519 -72187335 + L2 LINE L2 2219 3309 -4 550 254 37 8 chr2 178500895 178501029 -72186825 + L1ME1 LINE L1 127 264 -6132 283 203 110 8 chr2 178501025 178501143 -72186711 + L1ME1 LINE L1 2934 3063 -3152 * 1340 134 186 8 chr2 178501155 178501408 -72186446 - AluY SINE Alu -13 298 1 22 0 0 0 chr2 178501542 178501564 -72186290 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr2 178502898 178502938 -72184916 + AT_rich Low_complexity Low_complexity 1 40 0 1972 136 0 40 chr2 178503413 178503736 -72184118 + AluSx SINE Alu 1 310 -2 314 236 158 16 chr2 178504594 178504721 -72183133 - L1ME1 LINE L1 0 6166 6022 841 130 0 38 chr2 178504730 178504861 -72182993 - FLAM_C SINE Alu -5 128 3 22 0 0 0 chr2 178505583 178505605 -72182249 + AT_rich Low_complexity Low_complexity 1 22 0 1112 146 0 12 chr2 178505763 178505927 -72181927 + FRAM SINE Alu 1 159 -17 214 91 0 45 chr2 178506074 178506118 -72181736 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 301 203 31 31 chr2 178506571 178506635 -72181219 - MER2 DNA MER2_type -2 343 280 351 349 84 5 chr2 178506936 178507151 -72180703 + L1ME1 LINE L1 3609 3840 -2375 25 0 0 0 chr2 178507425 178507450 -72180404 + AT_rich Low_complexity Low_complexity 1 25 0 3259 211 65 33 chr2 178507509 178509145 -72178709 + L1ME1 LINE L1 4562 6230 -5 2271 110 3 0 chr2 178509835 178510134 -72177720 + AluSq SINE Alu 1 300 -13 395 285 43 40 chr2 178510156 178510409 -72177445 - L1MC4a LINE L1 -1742 6066 5813 533 212 29 77 chr2 178510423 178510593 -72177261 + MLT1E2 LTR MaLR 23 184 -442 8143 168 23 11 chr2 178510717 178512908 -72174946 - L1PA15 LINE L1 -261 7323 5107 306 0 0 0 chr2 178512908 178512942 -72174912 + (TTA)n Simple_repeat Simple_repeat 3 36 0 43452 43 2 1 chr2 178512942 178519077 -72168777 - L1PA3 LINE L1 -18 6137 1 4546 232 26 8 chr2 178519125 178519557 -72168297 - L1PA15 LINE L1 -2471 5094 4671 1993 139 3 13 chr2 178519557 178519866 -72167988 - AluSx SINE Alu -6 306 1 4546 232 26 8 chr2 178519866 178520634 -72167220 - L1PA15 LINE L1 -2894 4671 3873 613 319 54 8 chr2 178521125 178521366 -72166488 - L1PA15 LINE L1 -5417 2148 1897 917 339 7 42 chr2 178522182 178522610 -72165244 - L1M3a LINE L1 -5532 423 11 963 244 72 40 chr2 178522633 178522982 -72164872 + L1MC4 LINE L1 7561 7920 -122 2050 260 23 50 chr2 178523067 178523991 -72163863 - L1M4 LINE L1 -2228 3918 3020 24 0 0 29 chr2 178524012 178524023 -72163831 + AT_rich Low_complexity Low_complexity 1 11 -23 2541 58 0 13 chr2 178524023 178524335 -72163519 - AluY SINE Alu -3 308 1 24 0 0 29 chr2 178524335 178524358 -72163496 + AT_rich Low_complexity Low_complexity 11 34 0 204 240 106 96 chr2 178525019 178525123 -72162731 - MIR SINE MIR -46 216 112 210 226 280 21 chr2 178525955 178526048 -72161806 + MIR SINE MIR 19 135 -73 205 195 0 0 chr2 178526485 178526526 -72161328 + L2 LINE L2 3226 3266 -6 21 0 0 0 chr2 178527231 178527252 -72160602 + AT_rich Low_complexity Low_complexity 1 21 0 618 166 21 96 chr2 178528936 178528963 -72158891 - MER53 DNA DNA -13 176 149 2071 109 3 7 chr2 178528963 178529281 -72158573 - AluSx SINE Alu 0 319 3 618 166 21 96 chr2 178529281 178529439 -72158415 - MER53 DNA DNA -40 149 4 319 296 148 31 chr2 178532670 178532866 -72154988 + L2 LINE L2 3094 3312 -1 2337 98 0 16 chr2 178534009 178534327 -72153527 - AluSp SINE Alu 0 313 1 1212 159 48 0 chr2 178534390 178534598 -72153256 + AluJb SINE Alu 85 302 -10 347 278 208 17 chr2 178535515 178535688 -72152166 + MIR SINE MIR 44 249 -13 189 349 58 0 chr2 178535951 178536037 -72151817 + L2 LINE L2 3221 3311 -2 2507 64 0 0 chr2 178536053 178536364 -72151490 - AluY SINE Alu 0 311 1 1433 184 35 53 chr2 178536537 178536820 -72151034 + AluJo SINE Alu 1 278 -34 944 179 26 0 chr2 178537364 178537554 -72150300 + L1PA15 LINE L1 5971 6165 0 217 333 43 11 chr2 178537592 178537685 -72150169 - MIR SINE MIR -147 115 20 2087 126 3 35 chr2 178538184 178538501 -72149353 + AluSx SINE Alu 1 307 -5 1842 136 0 0 chr2 178539492 178539749 -72148105 - AluSq SINE Alu -56 257 1 356 253 121 37 chr2 178539803 178539993 -72147861 - HAL1 LINE L1 -17 2490 2285 229 272 0 22 chr2 178540121 178540213 -72147641 + L1MC4 LINE L1 6614 6703 -1339 * 260 198 0 62 chr2 178540147 178540243 -72147611 - L1MC4 LINE L1 -1339 6703 6614 242 259 24 0 chr2 178540246 178540331 -72147523 + L1MC4 LINE L1 6617 6703 -1339 242 267 0 22 chr2 178540317 178540407 -72147447 - L1MC4 LINE L1 -1341 6701 6614 231 308 0 22 chr2 178540331 178540422 -72147432 + L1MC4 LINE L1 6614 6702 -1340 * 721 208 9 9 chr2 178540426 178540652 -72147202 + (CATA)n Simple_repeat Simple_repeat 1 226 0 710 219 0 11 chr2 178540682 178540860 -72146994 + (CATATA)n Simple_repeat Simple_repeat 1 176 0 584 221 32 0 chr2 178540860 178541303 -72146551 + (CATA)n Simple_repeat Simple_repeat 1 457 0 574 236 153 56 chr2 178541551 178541924 -72145930 - HAL1 LINE L1 -763 1744 1336 1474 209 57 8 chr2 178541947 178542334 -72145520 - L1MB8 LINE L1 -6 6172 5767 3061 218 67 18 chr2 178544107 178545414 -72142440 - L1MB8 LINE L1 -393 5781 4410 758 245 83 52 chr2 178545419 178545839 -72142015 - HAL1 LINE L1 -1154 1353 921 573 223 0 0 chr2 178545944 178546110 -72141744 + (TA)n Simple_repeat Simple_repeat 1 166 0 2304 73 0 0 chr2 178546567 178546867 -72140987 + L1PA7 LINE L1 5854 6153 -1 372 314 106 42 chr2 178547876 178548300 -72139554 + MLT1K LTR MaLR 134 584 -4 925 239 42 17 chr2 178548447 178548685 -72139169 - MLT1K LTR MaLR -80 508 265 1806 143 4 0 chr2 178549647 178549927 -72137927 - L1MC1 LINE L1 -5 6328 6048 225 250 15 15 chr2 178549963 178550031 -72137823 - L1MC1 LINE L1 -277 6056 5989 575 273 113 44 chr2 178551111 178551298 -72136556 + L1ME3A LINE L1 5546 5765 -405 1701 182 42 62 chr2 178551298 178551700 -72136154 - MSTD LTR MaLR -1 395 2 575 273 113 44 chr2 178551700 178551831 -72136023 + L1ME3A LINE L1 5765 5886 -284 316 163 26 26 chr2 178551867 178552020 -72135834 + (TA)n Simple_repeat Simple_repeat 1 153 0 487 311 86 42 chr2 178552566 178553160 -72134694 + L1MEd LINE L1 246 865 -5254 282 115 0 19 chr2 178553204 178553256 -72134598 - Alu SINE Alu -2 300 250 34 24 0 0 chr2 178553337 178553378 -72134476 + AT_rich Low_complexity Low_complexity 1 41 0 2018 137 0 3 chr2 178554868 178555161 -72132693 - AluSx SINE Alu -20 292 1 1437 222 154 2 chr2 178555631 178556073 -72131781 - MER45B DNA AcHobo 0 1040 532 2381 81 0 10 chr2 178556086 178556395 -72131459 + AluY SINE Alu 1 306 -5 372 59 88 0 chr2 178556770 178556872 -72130982 + (TA)n Simple_repeat Simple_repeat 2 112 0 187 54 54 0 chr2 178556907 178556944 -72130910 + (TA)n Simple_repeat Simple_repeat 2 40 0 1411 159 101 7 chr2 178556953 178557229 -72130625 - L1PA16 LINE L1 -54 6112 5811 445 303 108 53 chr2 178557674 178558298 -72129556 + L1ME4a LINE L1 5267 5936 -185 1923 118 21 7 chr2 178558298 178558586 -72129268 - AluSq SINE Alu -21 292 1 445 303 108 53 chr2 178558586 178558757 -72129097 + L1ME4a LINE L1 5936 6096 -25 408 278 30 8 chr2 178560090 178560223 -72127631 - MER5A DNA MER1_type -4 185 50 216 130 0 0 chr2 178560530 178560576 -72127278 + (A)n Simple_repeat Simple_repeat 1 46 0 2196 117 3 0 chr2 178560579 178560877 -72126977 + AluSc SINE Alu 1 299 -10 250 290 59 67 chr2 178561500 178561695 -72126159 + MIR SINE MIR 20 218 -44 2316 95 3 0 chr2 178562830 178563126 -72124728 - AluSg SINE Alu -13 297 1 295 306 45 38 chr2 178563686 178563843 -72124011 + MER5B DNA MER1_type 2 159 -19 1413 155 30 54 chr2 178564364 178564699 -72123155 - L1MA7 LINE L1 -2 6289 5963 245 271 106 0 chr2 178568371 178568456 -72119398 + MIR3 SINE MIR 85 178 -30 1572 193 22 4 chr2 178568472 178568742 -72119112 + AluJb SINE Alu 17 291 -21 1077 234 39 0 chr2 178568836 178569067 -72118787 + MIR SINE MIR 12 251 -11 247 277 45 27 chr2 178569667 178569779 -72118075 - MIR SINE MIR -42 220 107 21 0 0 0 chr2 178570377 178570398 -72117456 + AT_rich Low_complexity Low_complexity 1 21 0 226 269 19 74 chr2 178570875 178570983 -72116871 + LTR67 LTR ERVL 456 557 0 426 244 143 70 chr2 178571080 178571310 -72116544 + MIR SINE MIR 1 247 -15 25 0 0 0 chr2 178571588 178571613 -72116241 + AT_rich Low_complexity Low_complexity 1 25 0 275 263 105 0 chr2 178572085 178572161 -72115693 + MIR SINE MIR 23 106 -156 216 196 0 0 chr2 178572671 178572717 -72115137 + A-rich Low_complexity Low_complexity 1 46 0 590 329 19 9 chr2 178572720 178572936 -72114918 - MIR SINE MIR -41 221 4 186 103 0 0 chr2 178573192 178573221 -72114633 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4065 143 22 37 chr2 178573378 178574153 -72113701 + L1MB3 LINE L1 5413 6175 -8 21 0 0 0 chr2 178574153 178574174 -72113680 + AT_rich Low_complexity Low_complexity 1 21 0 6234 82 5 3 chr2 178574184 178575519 -72112335 - L1PA13 LINE L1 -14 6149 4808 3307 155 16 42 chr2 178575509 178576134 -72111720 - L1MA8 LINE L1 -195 6096 5488 1064 171 0 26 chr2 178576134 178576327 -72111527 - AluJo SINE Alu -4 308 121 3648 139 6 18 chr2 178576327 178577065 -72110789 - L1MA8 LINE L1 -743 5403 4749 354 223 217 30 chr2 178577065 178577231 -72110623 - MLT1H LTR MaLR -4 538 342 391 338 118 29 chr2 178577265 178577469 -72110385 - MLT1H LTR MaLR -249 300 79 9654 186 19 21 chr2 178577555 178578470 -72109384 - L1PA16 LINE L1 -5 6161 5246 2183 115 0 7 chr2 178578470 178578774 -72109080 - AluSx SINE Alu -10 302 1 9654 186 19 21 chr2 178578774 178580996 -72106858 - L1PA16 LINE L1 -920 5246 3035 823 171 6 24 chr2 178580995 178581159 -72106695 + L1PA16 LINE L1 5940 6100 -66 * 292 257 26 18 chr2 178581190 178581303 -72106551 + L1ME LINE L1 5336 5449 -713 243 186 23 0 chr2 178581304 178581347 -72106507 - MER45B DNA AcHobo -747 293 250 661 231 59 38 chr2 178581358 178581544 -72106310 + MER45B DNA AcHobo 327 516 -524 306 0 0 0 chr2 178581552 178581586 -72106268 + (TA)n Simple_repeat Simple_repeat 2 35 0 230 362 3 14 chr2 178582036 178582117 -72105737 - MIR SINE MIR -124 84 2 214 306 0 0 chr2 178582128 178582190 -72105664 - L2 LINE L2 -1 3271 3210 26 0 0 0 chr2 178583697 178583723 -72104131 + AT_rich Low_complexity Low_complexity 1 26 0 254 233 17 52 chr2 178585098 178585214 -72102640 + CT-rich Low_complexity Low_complexity 4 115 0 323 283 11 0 chr2 178585509 178585601 -72102253 + (TA)n Simple_repeat Simple_repeat 1 93 0 265 274 24 0 chr2 178585668 178585776 -72102078 + (CATATA)n Simple_repeat Simple_repeat 1 110 0 1899 96 0 0 chr2 178586771 178587011 -72100843 + AluY SINE Alu 58 297 -14 25 0 0 0 chr2 178588385 178588410 -72099444 + AT_rich Low_complexity Low_complexity 1 25 0 236 302 83 10 chr2 178588756 178588852 -72099002 - L3b LINE CR1 -130 1453 1351 453 269 112 39 chr2 178589099 178589411 -72098443 - MER97c DNA MER1_type? 0 1090 756 2445 242 88 11 chr2 178589414 178590212 -72097642 - MER97b DNA MER1_type? -194 859 1 1040 220 11 60 chr2 178590686 178590954 -72096900 - L1ME1 LINE L1 -8 6158 5904 1256 78 6 6 chr2 178590954 178591134 -72096720 + MSTA LTR MaLR 1 180 -248 1448 28 0 17 chr2 178591135 178591314 -72096540 - L1PA4 LINE L1 0 6155 5980 6736 17 0 0 chr2 178591314 178592084 -72095770 + L1PA2 LINE L1 5384 6155 0 1792 14 0 0 chr2 178592097 178592304 -72095550 + L1PA5 LINE L1 5770 5976 -178 1600 167 0 4 chr2 178592787 178593045 -72094809 + AluJb SINE Alu 3 259 -53 324 315 34 13 chr2 178593048 178593197 -72094657 - L2 LINE L2 -706 2608 2457 2054 135 140 8 chr2 178593232 178593610 -72094244 - MSTA LTR MaLR 0 428 1 1970 126 3 13 chr2 178593610 178593919 -72093935 - MSTA-int LTR MaLR 0 1580 1275 299 231 13 0 chr2 178593975 178594053 -72093801 + L1MC4 LINE L1 5716 5794 -327 15450 151 34 23 chr2 178594074 178598874 -72088980 - L1MA1 LINE L1 0 7721 2835 1915 162 0 0 chr2 178598874 178599193 -72088661 - AluSx SINE Alu 0 319 1 15450 151 34 23 chr2 178599193 178601021 -72086833 - L1MA1 LINE L1 -4886 2835 1027 344 322 26 0 chr2 178601052 178601204 -72086650 + L1MC4 LINE L1 5815 5970 -1838 22 35 0 0 chr2 178601333 178601362 -72086492 + AT_rich Low_complexity Low_complexity 1 29 0 556 226 65 70 chr2 178601527 178601726 -72086128 + L2 LINE L2 2596 2793 -521 653 254 124 72 chr2 178601728 178602075 -72085779 + L2 LINE L2 2941 3305 -8 329 311 0 0 chr2 178602137 178602227 -72085627 + L1MC4 LINE L1 6614 6703 -1339 250 261 22 43 chr2 178602259 178602351 -72085503 - L1MC4 LINE L1 -1339 6703 6614 297 316 0 0 chr2 178602357 178602493 -72085361 + (TA)n Simple_repeat Simple_repeat 2 137 0 263 167 30 45 chr2 178602512 178602578 -72085276 + (CATATA)n Simple_repeat Simple_repeat 5 69 0 23 54 0 0 chr2 178603209 178603246 -72084608 + AT_rich Low_complexity Low_complexity 1 37 0 21 71 0 0 chr2 178603812 178603854 -72084000 + AT_rich Low_complexity Low_complexity 1 42 0 1520 203 7 10 chr2 178603878 178604174 -72083680 + AluJo SINE Alu 1 295 -17 21 36 0 0 chr2 178604275 178604303 -72083551 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 178604874 178604902 -72082952 + AT_rich Low_complexity Low_complexity 1 28 0 264 30 0 0 chr2 178605538 178605571 -72082283 + (TG)n Simple_repeat Simple_repeat 2 34 0 206 156 0 0 chr2 178605857 178605889 -72081965 - MER91B DNA MER1_type -126 64 33 315 309 99 99 chr2 178606667 178607010 -72080844 + L2 LINE L2 2926 3268 -4 1838 95 15 15 chr2 178607484 178607780 -72080074 + AluSc SINE Alu 8 303 0 1567 209 23 3 chr2 178608973 178609279 -72078575 - AluJb SINE Alu 0 312 1 685 251 70 0 chr2 178609554 178609741 -72078113 + MIR SINE MIR 63 262 0 243 190 0 0 chr2 178612844 178612902 -72074952 + (TA)n Simple_repeat Simple_repeat 2 59 0 2044 140 3 0 chr2 178616038 178616345 -72071509 - AluSx SINE Alu -4 308 1 21 0 0 0 chr2 178617180 178617201 -72070653 + AT_rich Low_complexity Low_complexity 1 21 0 223 266 156 9 chr2 178617527 178617636 -72070218 - L2 LINE L2 0 3313 3189 2073 113 0 0 chr2 178619861 178620136 -72067718 - AluSx SINE Alu -5 307 33 1037 161 16 10 chr2 178620353 178620546 -72067308 + AluSg SINE Alu 1 194 -116 289 172 94 0 chr2 178620668 178620732 -72067122 + MER3 DNA MER1_type 136 205 -4 327 235 65 98 chr2 178620752 178620905 -72066949 + MIR SINE MIR 59 206 -56 207 358 173 6 chr2 178621157 178621319 -72066535 - MIR SINE MIR -2 260 72 327 106 0 0 chr2 178621320 178621367 -72066487 - MADE1 DNA Mariner 0 80 34 425 108 46 0 chr2 178621397 178621462 -72066392 - MADE1 DNA Mariner -9 71 4 634 240 93 77 chr2 178621765 178621888 -72065966 + MIR SINE MIR 6 126 -136 2733 68 3 14 chr2 178621888 178622256 -72065598 + L1PA7 LINE L1 5778 6141 -13 634 240 93 77 chr2 178622256 178622378 -72065476 + MIR SINE MIR 126 255 -7 385 277 31 0 chr2 178623626 178623756 -72064098 + L1ME LINE L1 5547 5680 -441 1556 195 98 36 chr2 178623948 178624426 -72063428 - Charlie4a DNA MER1_type 0 508 1 9850 130 14 18 chr2 178624743 178624902 -72062952 - MER41A-int LTR ERV1 -4424 1522 1364 216 0 0 0 chr2 178624902 178624926 -72062928 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 9850 130 14 18 chr2 178624926 178626294 -72061560 - MER41A-int LTR ERV1 -4582 1364 1 907 89 25 57 chr2 178626294 178626380 -72061474 - MER41A LTR ERV1 0 554 474 1544 108 31 0 chr2 178626380 178626603 -72061251 - MER30 DNA MER1_type 0 230 1 907 89 25 57 chr2 178626603 178626674 -72061180 - MER41A LTR ERV1 -80 474 402 261 139 0 0 chr2 178628795 178628838 -72059016 + (TTCCC)n Simple_repeat Simple_repeat 4 46 0 2089 141 16 0 chr2 178628848 178629152 -72058702 - AluSx SINE Alu -1 311 3 21 0 0 0 chr2 178629949 178629970 -72057884 + AT_rich Low_complexity Low_complexity 1 21 0 423 395 92 19 chr2 178630060 178630650 -72057204 - L2 LINE L2 -676 2638 2006 7011 60 7 0 chr2 178630950 178632439 -72055415 + L1PA7 LINE L1 4659 6154 0 195 379 39 19 chr2 178634093 178634196 -72053658 - MIR SINE MIR -66 142 38 1237 266 223 23 chr2 178634242 178634791 -72053063 + L2 LINE L2 2403 3084 -229 1942 188 71 133 chr2 178634791 178635566 -72052288 - LTR8A LTR ERV1 0 727 1 1237 266 223 23 chr2 178635566 178635658 -72052196 + L2 LINE L2 3084 3156 -157 2283 92 0 0 chr2 178635659 178635971 -72051883 - AluSx SINE Alu 0 312 1 44 110 0 0 chr2 178635973 178636164 -72051690 + AT_rich Low_complexity Low_complexity 1 191 0 330 26 0 0 chr2 178636165 178636204 -72051650 + (CA)n Simple_repeat Simple_repeat 1 39 0 450 299 52 0 chr2 178636204 178636338 -72051516 + L2 LINE L2 3172 3312 -1 241 224 0 0 chr2 178636338 178636396 -72051458 - L1ME LINE L1 -456 5665 5608 2657 134 40 7 chr2 178636766 178637220 -72050634 - MER34C LTR ERV1 0 585 117 2124 98 101 21 chr2 178637321 178637658 -72050196 - THE1B LTR MaLR 0 364 1 299 337 40 0 chr2 178637804 178637905 -72049949 + MIR SINE MIR 19 123 -139 2980 245 38 11 chr2 178637934 178638835 -72049019 + L1ME3 LINE L1 5173 6096 -66 22 0 0 0 chr2 178638837 178638859 -72048995 + AT_rich Low_complexity Low_complexity 1 22 0 357 279 48 0 chr2 178638901 178639005 -72048849 + MIR SINE MIR 137 245 -17 21 0 0 0 chr2 178639284 178639305 -72048549 + AT_rich Low_complexity Low_complexity 1 21 0 543 308 59 8 chr2 178639355 178639608 -72048246 + L1ME LINE L1 5402 5667 -454 673 211 0 35 chr2 178639700 178639840 -72048014 - Tigger3b DNA MER2_type 0 1231 1097 2522 99 0 51 chr2 178639840 178639891 -72047963 - THE1C LTR MaLR -1 374 322 1948 119 51 14 chr2 178639891 178640186 -72047668 - AluSx SINE Alu -6 306 1 2522 99 0 51 chr2 178640186 178640526 -72047328 - THE1C LTR MaLR -53 322 3 * 6420 128 37 29 chr2 178640526 178641614 -72046240 - Tigger3b DNA MER2_type -134 1097 1 252 273 109 36 chr2 178642578 178642743 -72045111 + L1ME LINE L1 5727 5903 -218 549 160 161 0 chr2 178642862 178643005 -72044849 + MER58B DNA MER1_type 169 336 -5 24 0 0 0 chr2 178643032 178643056 -72044798 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr2 178643264 178643295 -72044559 + AT_rich Low_complexity Low_complexity 1 31 0 457 296 53 12 chr2 178643423 178643670 -72044184 - MARNA DNA Mariner -281 305 49 9597 26 3 0 chr2 178644533 178646442 -72041412 - L1PA4 LINE L1 0 6155 4241 385 247 72 60 chr2 178647063 178647215 -72040639 + MIR SINE MIR 61 212 -50 604 228 168 55 chr2 178649531 178649935 -72037919 + L1ME4a LINE L1 5664 6113 -8 22 0 0 0 chr2 178651304 178651326 -72036528 + AT_rich Low_complexity Low_complexity 1 22 0 1532 294 63 9 chr2 178654278 178654805 -72033049 - MLT1H1 LTR MaLR 0 555 1 453 204 31 0 chr2 178655709 178655807 -72032047 - MER53 DNA DNA 0 189 89 679 132 26 0 chr2 178655834 178655948 -72031906 - MER53 DNA DNA -71 118 2 244 300 41 96 chr2 178657237 178657457 -72030397 + MIR SINE MIR 5 212 -50 22 56 0 0 chr2 178657507 178657543 -72030311 + AT_rich Low_complexity Low_complexity 1 36 0 248 88 35 17 chr2 178657580 178657638 -72030216 - L1PA15 LINE L1 -6 6159 6101 22 35 0 0 chr2 178657642 178657671 -72030183 + AT_rich Low_complexity Low_complexity 1 29 0 231 36 0 0 chr2 178758294 178758322 -71929532 + (TAA)n Simple_repeat Simple_repeat 2 29 0 259 267 207 15 chr2 178758670 178758805 -71929049 - MLT1F1 LTR MaLR -7 560 400 282 329 46 26 chr2 178758877 178759029 -71928825 - MLT1F1 LTR MaLR -362 205 51 426 69 0 0 chr2 178760043 178760101 -71927753 + (GA)n Simple_repeat Simple_repeat 2 59 0 23 33 0 0 chr2 178763472 178763502 -71924352 + AT_rich Low_complexity Low_complexity 1 30 0 250 384 64 36 chr2 178764158 178764377 -71923477 + L3 LINE CR1 975 1199 -378 197 224 17 0 chr2 178765688 178765746 -71922108 + CT-rich Low_complexity Low_complexity 1 59 0 575 110 17 17 chr2 178766215 178766333 -71921521 + (GA)n Simple_repeat Simple_repeat 2 119 0 182 355 66 16 chr2 178769295 178769416 -71918438 + MIR SINE MIR 100 226 -36 220 315 22 0 chr2 178769845 178769934 -71917920 + MIR SINE MIR 57 147 -115 255 61 0 0 chr2 178770326 178770359 -71917495 + (TTA)n Simple_repeat Simple_repeat 1 33 0 2045 241 25 17 chr2 178771019 178771622 -71916232 - L1MA9 LINE L1 -381 5931 5324 258 302 138 0 chr2 178771770 178771886 -71915968 + MIR SINE MIR 104 235 -27 26 64 0 0 chr2 178773002 178773049 -71914805 + AT_rich Low_complexity Low_complexity 1 47 0 26 0 0 0 chr2 178773232 178773258 -71914596 + AT_rich Low_complexity Low_complexity 1 26 0 259 203 0 17 chr2 178774130 178774189 -71913665 + tRNA-Lys-AAA tRNA tRNA 6 63 -13 22 35 0 0 chr2 178774240 178774269 -71913585 + AT_rich Low_complexity Low_complexity 1 29 0 306 0 0 0 chr2 178774395 178774429 -71913425 + (TA)n Simple_repeat Simple_repeat 2 35 0 377 325 49 39 chr2 178774635 178774921 -71912933 + L1M4 LINE L1 2262 2550 -3596 237 257 14 14 chr2 178775018 178775088 -71912766 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 225 159 0 0 chr2 178776069 178776113 -71911741 + A-rich Low_complexity Low_complexity 1 44 0 563 0 15 0 chr2 178776300 178776367 -71911487 + (GAAAA)n Simple_repeat Simple_repeat 3 70 0 255 186 34 0 chr2 178776986 178777045 -71910809 - LTR37B LTR ERV1 -184 284 224 209 229 16 0 chr2 178779265 178779326 -71908528 + (TTTA)n Simple_repeat Simple_repeat 1 62 0 227 242 11 74 chr2 178780558 178780653 -71907201 + CT-rich Low_complexity Low_complexity 1 89 0 350 170 11 0 chr2 178780813 178780907 -71906947 + (TG)n Simple_repeat Simple_repeat 2 96 0 258 193 26 35 chr2 178782268 178782382 -71905472 + (TTATA)n Simple_repeat Simple_repeat 3 115 0 305 127 32 32 chr2 178783611 178783674 -71904180 - L1MCa LINE L1 -4360 2066 2004 301 256 227 25 chr2 178784285 178784606 -71903248 + MLT1D LTR MaLR 20 405 -100 306 0 0 0 chr2 178784635 178784669 -71903185 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 226 204 74 0 chr2 178784669 178784723 -71903131 + MLT1D LTR MaLR 447 504 -1 217 111 79 0 chr2 178785933 178785996 -71901858 + (TA)n Simple_repeat Simple_repeat 2 69 0 410 0 20 0 chr2 178785998 178786048 -71901806 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 301 29 0 0 chr2 178787048 178787083 -71900771 + (TC)n Simple_repeat Simple_repeat 1 35 0 336 200 0 0 chr2 178787083 178787163 -71900691 + (TG)n Simple_repeat Simple_repeat 1 80 0 21 0 0 0 chr2 178787944 178787965 -71899889 + AT_rich Low_complexity Low_complexity 1 21 0 271 263 38 0 chr2 178789817 178789897 -71897957 + MLT1A2 LTR MaLR 279 361 -13 1029 89 0 0 chr2 178790336 178790482 -71897372 + (TTTC)n Simple_repeat Simple_repeat 4 149 0 23 33 0 0 chr2 178790516 178790546 -71897308 + AT_rich Low_complexity Low_complexity 1 30 0 270 0 0 0 chr2 178793246 178793276 -71894578 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 186 103 0 0 chr2 178793742 178793771 -71894083 + (A)n Simple_repeat Simple_repeat 1 29 0 243 204 0 0 chr2 178794471 178794525 -71893329 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 555 29 0 0 chr2 178794963 178795032 -71892822 + (TG)n Simple_repeat Simple_repeat 1 69 0 227 261 23 11 chr2 178796411 178796499 -71891355 + CT-rich Low_complexity Low_complexity 1 89 0 462 188 0 0 chr2 178797561 178797662 -71890192 + (TG)n Simple_repeat Simple_repeat 2 102 0 205 186 23 0 chr2 178798269 178798312 -71889542 + (TG)n Simple_repeat Simple_repeat 2 45 0 299 323 169 5 chr2 178799891 178800080 -71887774 + L2 LINE L2 2826 3045 -268 25 0 0 0 chr2 178800509 178800534 -71887320 + AT_rich Low_complexity Low_complexity 1 25 0 410 0 20 0 chr2 178803599 178803649 -71884205 + (TG)n Simple_repeat Simple_repeat 2 52 0 246 32 0 0 chr2 178806269 178806300 -71881554 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 441 0 0 0 chr2 178806299 178806348 -71881506 + (GA)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr2 178806370 178806398 -71881456 + AT_rich Low_complexity Low_complexity 1 28 0 198 286 39 26 chr2 178806618 178806695 -71881159 - L2 LINE L2 -71 3242 3165 355 326 63 61 chr2 178807390 178807865 -71879989 + L1MA4 LINE L1 1743 2218 -4631 353 299 10 10 chr2 178808812 178809009 -71878845 + L1MA4 LINE L1 2976 3172 -3676 2184 292 12 28 chr2 178809017 178810708 -71877146 + L1MA4 LINE L1 4949 6606 -396 432 0 0 0 chr2 178811664 178811712 -71876142 + (CAAAA)n Simple_repeat Simple_repeat 4 51 0 279 315 61 61 chr2 178811848 178812258 -71875596 - L2 LINE L2 -429 2885 2476 685 40 59 0 chr2 178812394 178812495 -71875359 + A-rich Low_complexity Low_complexity 5 111 0 24 0 0 0 chr2 178813421 178813445 -71874409 + AT_rich Low_complexity Low_complexity 1 24 0 501 68 0 0 chr2 178813767 178813841 -71874013 + (CA)n Simple_repeat Simple_repeat 1 74 0 252 234 104 0 chr2 178817803 178817880 -71869974 + AluSg SINE Alu 19 103 -197 26 64 0 0 chr2 178817925 178817972 -71869882 + AT_rich Low_complexity Low_complexity 1 47 0 181 297 55 11 chr2 178822680 178822771 -71865083 - MIR SINE MIR -64 198 104 277 297 130 49 chr2 178826574 178826759 -71861095 + MIR SINE MIR 12 211 -51 22 35 0 0 chr2 178828810 178828839 -71859015 + AT_rich Low_complexity Low_complexity 1 29 0 579 96 0 0 chr2 178829922 178830005 -71857849 + (TG)n Simple_repeat Simple_repeat 2 84 0 446 189 9 0 chr2 178830142 178830253 -71857601 + (TA)n Simple_repeat Simple_repeat 2 113 0 576 0 0 0 chr2 178830988 178831052 -71856802 + (TC)n Simple_repeat Simple_repeat 1 64 0 207 0 0 0 chr2 178831051 178831074 -71856780 + (CA)n Simple_repeat Simple_repeat 1 23 0 * 194 222 19 0 chr2 178831309 178831363 -71856491 + CT-rich Low_complexity Low_complexity 2 56 0 2203 304 26 21 chr2 178834157 178836089 -71851765 + L1MA9 LINE L1 1370 3317 -2829 201 133 0 0 chr2 178837250 178837280 -71850574 + (TG)n Simple_repeat Simple_repeat 1 30 0 375 246 66 0 chr2 178837656 178837778 -71850076 + MER96B DNA MER1_type? 20 149 -268 426 246 52 8 chr2 178837977 178838111 -71849743 + LTR40b LTR ERVL 323 462 0 27 29 0 0 chr2 178838523 178838557 -71849297 + AT_rich Low_complexity Low_complexity 1 34 0 237 59 0 59 chr2 178838857 178838908 -71848946 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 24 0 0 0 chr2 178839386 178839410 -71848444 + AT_rich Low_complexity Low_complexity 1 24 0 369 0 0 0 chr2 178839588 178839629 -71848225 + (CA)n Simple_repeat Simple_repeat 2 42 0 221 134 45 30 chr2 178839629 178839696 -71848158 + (TA)n Simple_repeat Simple_repeat 2 69 0 250 276 147 6 chr2 178839744 178839914 -71847940 - L1MA8 LINE L1 -42 6249 6056 420 71 0 0 chr2 178844253 178844309 -71843545 + (TC)n Simple_repeat Simple_repeat 1 56 0 235 315 0 0 chr2 178844309 178844401 -71843453 + (CA)n Simple_repeat Simple_repeat 2 93 0 414 57 0 0 chr2 178845443 178845496 -71842358 + (CA)n Simple_repeat Simple_repeat 2 54 0 228 311 0 14 chr2 178845823 178845897 -71841957 + (CATA)n Simple_repeat Simple_repeat 2 74 0 326 227 25 59 chr2 178846028 178846147 -71841707 + L1MC/D LINE L1 5317 5431 -2377 369 0 0 0 chr2 178846670 178846711 -71841143 + (TG)n Simple_repeat Simple_repeat 2 42 0 293 305 39 13 chr2 178847013 178847167 -71840687 + MLT1D LTR MaLR 297 454 -51 3801 270 16 11 chr2 178848343 178850252 -71837602 + L1MA9 LINE L1 4014 5931 -381 387 56 0 0 chr2 178852471 178852525 -71835329 + (CAAAAA)n Simple_repeat Simple_repeat 2 55 0 402 21 0 0 chr2 178852690 178852737 -71835117 + (GA)n Simple_repeat Simple_repeat 2 48 0 591 15 0 0 chr2 178852737 178852805 -71835049 + (GGAA)n Simple_repeat Simple_repeat 2 69 0 432 0 0 0 chr2 178852867 178852915 -71834939 + (A)n Simple_repeat Simple_repeat 1 48 0 21 36 0 0 chr2 178853006 178853034 -71834820 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 178854343 178854366 -71833488 + AT_rich Low_complexity Low_complexity 1 23 0 242 29 29 0 chr2 178854453 178854488 -71833366 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 23 0 0 0 chr2 178855948 178855971 -71831883 + AT_rich Low_complexity Low_complexity 1 23 0 259 357 19 32 chr2 178856208 178856362 -71831492 + L2 LINE L2 2828 2979 -334 567 0 0 0 chr2 178856570 178856633 -71831221 + (TAAAA)n Simple_repeat Simple_repeat 3 65 0 441 36 0 0 chr2 178858277 178858332 -71829522 + (GA)n Simple_repeat Simple_repeat 2 56 0 252 0 0 0 chr2 178858444 178858472 -71829382 + (CA)n Simple_repeat Simple_repeat 1 28 0 24 0 0 0 chr2 178858539 178858563 -71829291 + AT_rich Low_complexity Low_complexity 1 24 0 25 75 0 0 chr2 178859491 178859544 -71828310 + AT_rich Low_complexity Low_complexity 1 53 0 225 0 0 0 chr2 178859880 178859905 -71827949 + (A)n Simple_repeat Simple_repeat 1 25 0 336 48 0 0 chr2 178860654 178860696 -71827158 + (CA)n Simple_repeat Simple_repeat 1 42 0 507 165 0 0 chr2 178860904 178861013 -71826841 + (TG)n Simple_repeat Simple_repeat 2 110 0 235 222 19 0 chr2 178861020 178861074 -71826780 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 543 16 0 0 chr2 178861075 178861139 -71826715 + (TG)n Simple_repeat Simple_repeat 1 64 0 184 294 0 0 chr2 178861505 178861556 -71826298 - L2 LINE L2 0 3272 3222 254 245 0 59 chr2 178862274 178862376 -71825478 + (TATATG)n Simple_repeat Simple_repeat 5 100 0 212 151 38 19 chr2 178863453 178863506 -71824348 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 351 0 0 0 chr2 178865794 178865833 -71822021 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 576 0 0 0 chr2 178866326 178866390 -71821464 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 309 228 0 0 chr2 178866392 178866471 -71821383 + (CATATA)n Simple_repeat Simple_repeat 4 82 0 21 0 0 0 chr2 178866945 178866966 -71820888 + AT_rich Low_complexity Low_complexity 1 21 0 627 59 51 0 chr2 178867094 178867212 -71820642 + (TAGA)n Simple_repeat Simple_repeat 2 125 0 252 333 108 0 chr2 178867863 178867965 -71819889 + FLAM_C SINE Alu 4 116 -17 784 287 96 25 chr2 178868118 178868554 -71819300 + MLT1C LTR MaLR 1 467 0 749 11 11 0 chr2 178869984 178870074 -71817780 + (TG)n Simple_repeat Simple_repeat 1 91 0 423 0 0 0 chr2 178870304 178870351 -71817503 + (GA)n Simple_repeat Simple_repeat 2 48 0 312 70 0 0 chr2 178870790 178870833 -71817021 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 330 26 0 0 chr2 178870943 178870982 -71816872 + (CA)n Simple_repeat Simple_repeat 1 39 0 559 293 45 34 chr2 178870991 178871439 -71816415 - L1MA5 LINE L1 -364 5936 5477 558 0 0 0 chr2 178874931 178874993 -71812861 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 673 175 89 89 chr2 178875123 178875414 -71812440 - AluJo SINE Alu 0 312 22 212 163 0 20 chr2 178875995 178876044 -71811810 + GA-rich Low_complexity Low_complexity 1 48 0 284 83 21 0 chr2 178876135 178876183 -71811671 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 253 131 33 0 chr2 178877329 178877390 -71810464 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 213 108 0 0 chr2 178878935 178878972 -71808882 + (TC)n Simple_repeat Simple_repeat 2 38 0 441 0 0 0 chr2 178878977 178879026 -71808828 + (TG)n Simple_repeat Simple_repeat 2 50 0 397 350 86 0 chr2 178879661 178879858 -71807996 + L3b LINE CR1 1128 1341 -242 237 83 0 0 chr2 178880935 178880971 -71806883 + (A)n Simple_repeat Simple_repeat 1 36 0 266 315 68 14 chr2 178881383 178881529 -71806325 + MIR SINE MIR 56 209 -53 348 221 0 25 chr2 178881716 178881838 -71806016 + (CATA)n Simple_repeat Simple_repeat 2 120 0 213 39 0 0 chr2 178882161 178882187 -71805667 + (GGA)n Simple_repeat Simple_repeat 3 28 0 22 0 0 0 chr2 178883510 178883532 -71804322 + AT_rich Low_complexity Low_complexity 1 22 0 252 86 0 0 chr2 178884811 178884846 -71803008 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 579 85 0 0 chr2 178886019 178886101 -71801753 + (TG)n Simple_repeat Simple_repeat 2 83 0 303 167 15 182 chr2 178886791 178886923 -71800931 + AluSq/x SINE Alu 5 105 -198 246 32 0 0 chr2 178886926 178886957 -71800897 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1934 231 25 18 chr2 178888896 178889589 -71798265 - L1MA9 LINE L1 -486 5826 5130 296 384 23 0 chr2 178891191 178891324 -71796530 + MER5A DNA MER1_type 1 136 -53 216 252 10 68 chr2 178891497 178891600 -71796254 + MIR SINE MIR 120 216 -46 782 105 0 8 chr2 178893096 178893220 -71794634 + (GGAA)n Simple_repeat Simple_repeat 2 124 0 450 0 0 0 chr2 178893444 178893494 -71794360 + (CA)n Simple_repeat Simple_repeat 2 51 0 429 247 13 36 chr2 178895158 178895472 -71792382 + GA-rich Low_complexity Low_complexity 1 306 0 259 206 72 41 chr2 178895736 178895833 -71792021 - MIR SINE MIR -50 212 113 935 247 23 13 chr2 178898439 178898747 -71789107 - L1PA16 LINE L1 -236 5930 5620 279 0 0 0 chr2 178898930 178898961 -71788893 + (TG)n Simple_repeat Simple_repeat 1 31 0 274 284 23 0 chr2 178899254 178899342 -71788512 + (CA)n Simple_repeat Simple_repeat 1 90 0 186 286 41 31 chr2 178905564 178905662 -71782192 - MIR SINE MIR -57 205 107 7369 276 22 28 chr2 178907274 178911805 -71776049 - L1MA4 LINE L1 -370 5930 1432 234 222 14 28 chr2 178912671 178912743 -71775111 + AluJ/FLAM SINE Alu 3 73 -229 21 57 0 0 chr2 178912860 178912895 -71774959 + AT_rich Low_complexity Low_complexity 1 35 0 290 250 38 83 chr2 178913254 178913386 -71774468 - MSTC LTR MaLR -4 424 299 231 348 61 0 chr2 178913531 178913646 -71774208 - MSTC LTR MaLR -327 130 9 247 264 149 0 chr2 178913939 178914026 -71773828 - FLAM_C SINE Alu -5 128 29 594 0 0 0 chr2 178915725 178915791 -71772063 + (TC)n Simple_repeat Simple_repeat 1 66 0 279 0 0 0 chr2 178915851 178915882 -71771972 + (TG)n Simple_repeat Simple_repeat 2 32 0 3957 261 12 7 chr2 178917412 178919274 -71768580 - L1MA6 LINE L1 -369 5931 4060 716 266 38 4 chr2 178922173 178922410 -71765444 - L1MA5 LINE L1 -369 5931 5687 25 90 0 0 chr2 178922478 178922545 -71765309 + AT_rich Low_complexity Low_complexity 1 67 0 529 248 39 13 chr2 178922725 178922878 -71764976 - Tigger4(Zombi) DNA MER2_type -8 2723 2567 191 170 40 40 chr2 178923352 178923452 -71764402 + (CATA)n Simple_repeat Simple_repeat 4 103 0 309 51 0 0 chr2 178923562 178923601 -71764253 + (CA)n Simple_repeat Simple_repeat 1 39 0 207 0 0 0 chr2 178924019 178924042 -71763812 + (A)n Simple_repeat Simple_repeat 1 23 0 1463 244 30 23 chr2 178924992 178925464 -71762390 - L1PA16 LINE L1 -236 5930 5456 23 54 0 0 chr2 178925976 178926013 -71761841 + AT_rich Low_complexity Low_complexity 1 37 0 3280 276 21 33 chr2 178926756 178928798 -71759056 - L1ME2 LINE L1 -247 5917 3905 1862 304 26 12 chr2 178928827 178929957 -71757897 - L1ME2 LINE L1 -2639 3507 2363 321 223 33 58 chr2 178930008 178930129 -71757725 - L1ME2 LINE L1 -3785 2361 2244 435 296 15 15 chr2 178930244 178930450 -71757404 - L1ME2 LINE L1 -3784 2362 2157 598 304 57 37 chr2 178930684 178931246 -71756608 - L1M2 LINE L1 -4300 2563 1991 27 0 0 0 chr2 178934918 178934945 -71752909 + AT_rich Low_complexity Low_complexity 1 27 0 224 222 19 0 chr2 178935476 178935530 -71752324 + GA-rich Low_complexity Low_complexity 2 56 0 254 338 0 0 chr2 178935618 178935686 -71752168 - MIR3 SINE MIR -3 205 138 21 0 0 0 chr2 178940051 178940072 -71747782 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 178943063 178943083 -71744771 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 306 0 0 0 chr2 178943771 178943805 -71744049 + (TA)n Simple_repeat Simple_repeat 2 35 0 199 347 25 25 chr2 178946895 178947016 -71740838 + MIR SINE MIR 67 187 -75 258 326 71 10 chr2 178947050 178947148 -71740706 + MIR SINE MIR 19 122 -140 200 211 0 70 chr2 178947486 178947543 -71740311 + GA-rich Low_complexity Low_complexity 4 56 0 337 274 78 114 chr2 178947543 178947788 -71740066 - MIR SINE MIR -17 245 10 402 21 0 0 chr2 178948534 178948581 -71739273 + (CA)n Simple_repeat Simple_repeat 2 48 0 22 56 0 0 chr2 178949708 178949744 -71738110 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr2 178950135 178950160 -71737694 + (GGTTG)n Simple_repeat Simple_repeat 4 28 0 210 150 0 0 chr2 178952356 178952396 -71735458 + (T)n Simple_repeat Simple_repeat 1 40 0 192 40 0 0 chr2 178953173 178953198 -71734656 + (CCCA)n Simple_repeat Simple_repeat 4 28 0 316 250 48 0 chr2 178953367 178953451 -71734403 - LTR40b LTR ERVL 0 462 375 289 312 226 19 chr2 178953700 178954059 -71733795 - L2 LINE L2 -795 2519 2087 183 80 0 0 chr2 179055917 179055942 -71631912 + (TA)n Simple_repeat Simple_repeat 2 26 0 1554 181 23 10 chr2 179055974 179056273 -71631581 - AluJb SINE Alu -9 303 1 262 331 85 23 chr2 179056366 179056496 -71631358 + MIR SINE MIR 7 144 -118 68 55 0 0 chr2 179056521 179056631 -71631223 + AT_rich Low_complexity Low_complexity 1 110 0 285 197 15 0 chr2 179056785 179056851 -71631003 + MLT1J LTR MaLR 433 499 -12 785 131 0 58 chr2 179056851 179056988 -71630866 - FLAM_C SINE Alu -1 132 4 8049 60 31 0 chr2 179058099 179059216 -71628638 - L1P LINE L1 -1677 4469 3318 253 248 7 121 chr2 179060558 179060699 -71627155 + MER21B LTR ERV1 508 632 -231 557 186 9 9 chr2 179060742 179060855 -71626999 + FLAM_A SINE Alu 20 132 -10 498 221 99 41 chr2 179060860 179061032 -71626822 + MER21B LTR ERV1 625 806 -57 1260 176 15 0 chr2 179061090 179061352 -71626502 + LTR56 LTR ERV1 9 274 -171 570 215 160 9 chr2 179061366 179061585 -71626269 + LTR56 LTR ERV1 194 445 0 1104 199 0 42 chr2 179061706 179061922 -71625932 + AluJo SINE Alu 82 288 -24 29 0 0 0 chr2 179062169 179062198 -71625656 + AT_rich Low_complexity Low_complexity 1 29 0 300 258 103 10 chr2 179062945 179063042 -71624812 + L1MC4a LINE L1 5857 5962 -1846 1932 158 0 7 chr2 179063414 179063718 -71624136 - AluSx SINE Alu -10 302 1 795 125 0 59 chr2 179063829 179063981 -71623873 - L1PA13 LINE L1 -19 6144 6002 697 166 33 20 chr2 179064081 179064232 -71623622 + L1P4 LINE L1 5500 5652 -514 318 89 0 0 chr2 179064199 179064244 -71623610 - L1PA13 LINE L1 -495 5671 5627 * 3242 156 4 11 chr2 179064244 179064802 -71623052 + L1PA16 LINE L1 5611 6164 -2 1030 210 5 23 chr2 179065148 179065367 -71622487 - MER20 DNA MER1_type -4 215 1 194 204 19 37 chr2 179065397 179065451 -71622403 + L2 LINE L2 3256 3308 -5 1906 189 6 14 chr2 179066334 179066699 -71621155 - MLT1A1 LTR MaLR -1 364 3 596 206 35 7 chr2 179066998 179067139 -71620715 - L1MD1 LINE L1 -209 6033 5889 1700 282 121 22 chr2 179069323 179070320 -71617534 - L2 LINE L2 0 3313 2232 7103 92 111 9 chr2 179070438 179071602 -71616252 - L1P LINE L1 -4861 1285 3 2306 143 2 26 chr2 179071602 179072029 -71615825 - MER83B-int LTR ERV1 -623 4257 3841 667 148 8 8 chr2 179072034 179072156 -71615698 - THE1C LTR MaLR -4 371 250 1236 185 5 0 chr2 179072258 179072463 -71615391 - AluJo SINE Alu -23 289 84 667 164 9 0 chr2 179072468 179072584 -71615270 + AluJb SINE Alu 186 302 -10 431 247 188 82 chr2 179074188 179074229 -71613625 - L2 LINE L2 -97 3216 3181 2116 132 3 10 chr2 179074229 179074540 -71613314 + AluSx SINE Alu 1 309 -3 431 247 188 82 chr2 179074540 179074713 -71613141 - L2 LINE L2 -132 3181 2968 508 196 9 45 chr2 179074713 179074825 -71613029 + MER81 DNA DNA 4 111 -3 431 247 188 82 chr2 179074825 179074864 -71612990 - L2 LINE L2 -345 2968 2935 38 0 0 0 chr2 179075131 179075169 -71612685 + AT_rich Low_complexity Low_complexity 1 38 0 605 289 91 41 chr2 179075620 179076257 -71611597 - HAL1b LINE L1 -613 735 67 1809 175 0 9 chr2 179076450 179076765 -71611089 + AluJo SINE Alu 1 312 0 537 85 57 38 chr2 179076913 179077019 -71610835 + L1M1 LINE L1 3196 3303 -4262 252 171 0 0 chr2 179077037 179077078 -71610776 - THE1C LTR MaLR 0 428 388 1012 41 0 0 chr2 179077078 179077200 -71610654 + AluYb8 SINE Alu 197 318 0 1318 130 199 31 chr2 179077200 179077492 -71610362 - THE1C LTR MaLR -34 341 1 4623 169 29 13 chr2 179077492 179079032 -71608822 + L1M1 LINE L1 3309 6968 -755 11345 200 19 12 chr2 179079151 179081465 -71606389 - L1M1 LINE L1 -5226 2339 11 1035 286 16 11 chr2 179081465 179081835 -71606019 + MLT2D LTR ERVL 1 372 -42 1116 211 65 34 chr2 179082092 179082448 -71605406 - L1MD3 LINE L1 0 7995 7629 3202 183 50 11 chr2 179083777 179083993 -71603861 - L1MDa LINE L1 -3891 2649 2443 1490 148 25 101 chr2 179083993 179084149 -71603705 - AluJo SINE Alu -18 294 173 2401 101 0 3 chr2 179084149 179084457 -71603397 - AluSg SINE Alu -3 307 1 1490 148 25 101 chr2 179084457 179084480 -71603374 - AluJo SINE Alu -139 173 2 674 139 7 117 chr2 179084480 179084617 -71603237 - FLAM_C SINE Alu -10 123 2 3202 183 50 11 chr2 179084617 179085204 -71602650 - L1MDa LINE L1 -4097 2443 1815 2150 134 0 6 chr2 179085204 179085517 -71602337 - AluSx SINE Alu -1 311 1 23 0 0 0 chr2 179085524 179085547 -71602307 + AT_rich Low_complexity Low_complexity 1 23 0 715 216 14 0 chr2 179085565 179085704 -71602150 - FRAM SINE Alu -26 150 10 189 0 0 0 chr2 179085709 179085730 -71602124 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 249 108 0 0 chr2 179085729 179085766 -71602088 + (TA)n Simple_repeat Simple_repeat 1 37 0 4227 100 10 0 chr2 179085775 179086384 -71601470 - L1PA16 LINE L1 -9 6157 5543 509 227 7 7 chr2 179086484 179086638 -71601216 - L1MDa LINE L1 -3108 3432 3279 1556 173 3 67 chr2 179086737 179087067 -71600787 + AluJo SINE Alu 4 312 0 487 124 56 0 chr2 179087249 179087338 -71600516 + L1MA5A LINE L1 6201 6294 -3 24 0 0 0 chr2 179087482 179087506 -71600348 + AT_rich Low_complexity Low_complexity 1 24 0 1482 205 75 60 chr2 179087616 179088195 -71599659 - L1MDa LINE L1 -3253 3287 2693 2286 115 0 0 chr2 179088195 179088499 -71599355 - AluSg SINE Alu -6 304 1 1482 205 75 60 chr2 179088499 179088774 -71599080 - L1MDa LINE L1 -3847 2693 2424 919 161 45 13 chr2 179088775 179088930 -71598924 - AluJo/FRAM SINE Alu -18 294 135 2061 149 0 3 chr2 179088933 179089235 -71598619 - AluSg SINE Alu -5 305 5 252 224 17 0 chr2 179089393 179089451 -71598403 - L2 LINE L2 -2 3270 3212 371 258 106 0 chr2 179090202 179090334 -71597520 - L1MC5 LINE L1 -54 7907 7762 714 190 34 83 chr2 179090338 179090543 -71597311 + MLT1A1 LTR MaLR 1 195 -170 875 218 37 5 chr2 179090568 179090756 -71597098 + MLT1A1 LTR MaLR 172 365 0 3790 195 37 36 chr2 179090979 179091840 -71596014 - MER21B LTR ERV1 -1 862 1 484 293 76 44 chr2 179091849 179092074 -71595780 + MIR SINE MIR 31 262 0 1905 209 42 16 chr2 179092803 179093306 -71594548 - L1MB8 LINE L1 -1 6177 5662 437 302 69 25 chr2 179093378 179093537 -71594317 + MIR3 SINE MIR 2 167 -41 278 252 78 29 chr2 179093561 179093664 -71594190 + MIR SINE MIR 81 188 -74 420 275 237 5 chr2 179093826 179094037 -71593817 - MIR SINE MIR 0 262 3 1964 159 0 13 chr2 179094316 179094624 -71593230 - AluJo SINE Alu -6 306 3 1926 87 15 23 chr2 179094628 179094894 -71592960 - AluSx SINE Alu -11 301 38 37 0 0 0 chr2 179095380 179095417 -71592437 + AT_rich Low_complexity Low_complexity 1 37 0 716 234 63 50 chr2 179096190 179097105 -71590749 + L1MC4 LINE L1 5660 6486 -1322 2080 153 0 0 chr2 179097105 179097412 -71590442 - AluSx SINE Alu -1 311 5 716 234 63 50 chr2 179097412 179097485 -71590369 + L1MC4 LINE L1 6486 6557 -1251 247 259 0 0 chr2 179097493 179097547 -71590307 + (TG)n Simple_repeat Simple_repeat 1 54 0 823 205 116 92 chr2 179097594 179097975 -71589879 + MLT2D LTR ERVL 10 399 -65 198 0 0 0 chr2 179097975 179097997 -71589857 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 646 197 35 0 chr2 179098016 179098158 -71589696 + L1MC4 LINE L1 6768 6914 -1128 1010 94 0 0 chr2 179098158 179098285 -71589569 + AluSq/x SINE Alu 1 127 -186 2079 188 37 60 chr2 179098295 179098490 -71589364 + L1MC4 LINE L1 7379 7577 -418 895 142 0 15 chr2 179098490 179098624 -71589230 + FLAM_C SINE Alu 2 133 0 2079 188 37 60 chr2 179098624 179099122 -71588732 + L1MC4 LINE L1 7577 7994 -1 417 330 40 50 chr2 179099505 179099802 -71588052 + L2 LINE L2 2892 3185 -87 1476 216 0 30 chr2 179099868 179100169 -71587685 + AluJo SINE Alu 1 292 -20 28 0 0 0 chr2 179100412 179100440 -71587414 + AT_rich Low_complexity Low_complexity 1 28 0 802 234 37 5 chr2 179100689 179100877 -71586977 - MLT1A1 LTR MaLR 0 365 172 628 205 34 83 chr2 179100902 179101107 -71586747 - MLT1A1 LTR MaLR -170 195 1 263 311 0 0 chr2 179101140 179101243 -71586611 + L1MC5 LINE L1 7805 7907 -54 338 140 18 0 chr2 179101995 179102052 -71585802 + L2 LINE L2 3254 3311 -2 376 223 8 70 chr2 179102968 179103096 -71584758 + MIR SINE MIR 14 125 -83 192 200 0 0 chr2 179103399 179103444 -71584410 + (TG)n Simple_repeat Simple_repeat 2 46 0 1834 195 92 76 chr2 179104288 179104800 -71583054 + MLT2B1 LTR ERVL 1 520 0 234 0 0 0 chr2 179104933 179104959 -71582895 + (TA)n Simple_repeat Simple_repeat 1 26 0 315 0 0 0 chr2 179104966 179105001 -71582853 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr2 179105177 179105205 -71582649 + AT_rich Low_complexity Low_complexity 1 28 0 1072 309 0 7 chr2 179105315 179105619 -71582235 - AluJo SINE Alu 0 302 1 203 365 129 0 chr2 179108676 179108846 -71579008 - L2 LINE L2 -183 3089 2898 3150 249 112 24 chr2 179109172 179110438 -71577416 - L2 LINE L2 0 3313 1951 1788 217 19 10 chr2 179110439 179110849 -71577005 - MLT2D LTR ERVL 0 414 1 2647 196 30 38 chr2 179110849 179111485 -71576369 + L1M1 LINE L1 11 641 -6924 2108 136 6 12 chr2 179111661 179112000 -71575854 + MER1B DNA MER1_type 1 337 0 1781 144 72 36 chr2 179112568 179112930 -71574924 + THE1C LTR MaLR 1 375 0 302 324 9 9 chr2 179113040 179113145 -71574709 - MER5B DNA MER1_type 0 178 74 742 292 97 14 chr2 179113217 179113577 -71574277 + L2 LINE L2 2920 3309 -4 650 222 0 0 chr2 179114166 179114292 -71573562 + FLAM_A SINE Alu 5 130 -3 1947 143 0 0 chr2 179114295 179114610 -71573244 + AluSg SINE Alu 1 315 0 646 283 168 52 chr2 179114763 179115244 -71572610 + L3 LINE CR1 794 1330 -247 327 315 71 46 chr2 179115258 179115455 -71572399 - MIR SINE MIR -56 206 5 365 212 159 38 chr2 179115470 179115602 -71572252 + L3 LINE CR1 1342 1489 -88 29 28 0 0 chr2 179115607 179115643 -71572211 + AT_rich Low_complexity Low_complexity 1 36 0 365 287 41 33 chr2 179116106 179116228 -71571626 - L2 LINE L2 -9 3263 3141 292 348 78 31 chr2 179116380 179116726 -71571128 - L2 LINE L2 -215 3057 2661 23 68 0 0 chr2 179117605 179117649 -71570205 + GC_rich Low_complexity Low_complexity 1 44 0 304 297 60 132 chr2 179117737 179118239 -71569615 + L1M1 LINE L1 1249 1714 -5852 421 157 29 0 chr2 179119928 179119998 -71567856 + AluJ/FRAM SINE Alu 224 295 -17 2890 181 58 35 chr2 179120016 179120869 -71566985 - L1MB7 LINE L1 -3 6163 5357 370 345 58 35 chr2 179120875 179121046 -71566808 - MIR SINE MIR -70 192 18 1621 191 57 0 chr2 179121865 179122147 -71565707 - AluJb SINE Alu -14 298 1 252 209 88 77 chr2 179122148 179122239 -71565615 + MIR SINE MIR 123 214 -48 237 284 114 0 chr2 179122478 179122566 -71565288 + MIR SINE MIR 8 105 -157 2399 74 3 0 chr2 179122869 179123166 -71564688 + AluSg1 SINE Alu 1 298 -11 350 309 57 16 chr2 179123181 179123304 -71564550 - MIR SINE MIR -48 214 87 213 213 0 0 chr2 179123690 179123737 -71564117 + (TG)n Simple_repeat Simple_repeat 1 47 0 14336 113 24 60 chr2 179124823 179125566 -71562288 - Tigger1 DNA MER2_type -1 2417 1649 2300 90 0 0 chr2 179125566 179125866 -71561988 - AluY SINE Alu -11 300 1 14336 113 24 60 chr2 179125866 179127628 -71560226 - Tigger1 DNA MER2_type -769 1649 1 388 289 48 21 chr2 179127693 179127880 -71559974 + MER117 DNA MER1_type 6 197 0 21 36 0 0 chr2 179128210 179128238 -71559616 + AT_rich Low_complexity Low_complexity 1 28 0 1996 162 0 6 chr2 179128267 179128581 -71559273 - AluJb SINE Alu 0 312 1 1076 202 75 10 chr2 179128854 179129146 -71558708 - L1MD3 LINE L1 0 7995 7685 3334 184 85 29 chr2 179129845 179130342 -71557512 - L1MD1 LINE L1 -209 6427 5959 1841 176 17 50 chr2 179130342 179130745 -71557109 + MLT1B LTR MaLR 1 390 0 3334 184 85 29 chr2 179130745 179131401 -71556453 - L1MD1 LINE L1 -677 5959 5189 2334 251 81 25 chr2 179131410 179132032 -71555822 - L1MD1 LINE L1 -1426 5114 4528 1937 159 0 32 chr2 179132032 179132347 -71555507 - AluJo SINE Alu -7 305 1 2334 251 81 25 chr2 179132347 179133289 -71554565 - L1MD1 LINE L1 -2012 4528 3300 959 222 7 74 chr2 179133412 179133709 -71554145 + AluJo SINE Alu 6 282 -30 329 206 27 0 chr2 179133923 179133996 -71553858 + L1MA5A LINE L1 6201 6275 -22 4397 214 26 8 chr2 179134099 179135259 -71552595 - L1 LINE L1 -841 5305 4125 2406 89 0 0 chr2 179135272 179135574 -71552280 - AluY SINE Alu -9 302 1 344 222 49 12 chr2 179135581 179135662 -71552192 - FLAM SINE Alu -8 125 42 1739 204 85 40 chr2 179135666 179136323 -71551531 - L1MD1 LINE L1 -4700 1840 1154 1973 215 72 25 chr2 179136337 179136896 -71550958 - L1MD1 LINE L1 -5935 605 21 621 286 12 12 chr2 179137532 179137703 -71550151 - MER5B DNA MER1_type 0 178 8 23 0 0 0 chr2 179138761 179138784 -71549070 + AT_rich Low_complexity Low_complexity 1 23 0 2198 155 38 23 chr2 179138895 179139322 -71548532 + Tigger2a DNA MER2_type 1 433 -1 29 0 0 0 chr2 179140436 179140465 -71547389 + AT_rich Low_complexity Low_complexity 1 29 0 1574 202 0 30 chr2 179140712 179141009 -71546845 - AluJo SINE Alu -24 288 1 6340 146 20 6 chr2 179141304 179142764 -71545090 + L1MA2 LINE L1 2733 6304 0 1367 221 24 59 chr2 179142800 179143175 -71544679 + MLT1A1 LTR MaLR 4 365 0 466 242 78 8 chr2 179143178 179143306 -71544548 - L2 LINE L2 -1363 1951 1815 544 282 64 66 chr2 179143490 179144019 -71543835 + L1MEd LINE L1 565 1092 -5027 292 339 124 41 chr2 179144663 179145050 -71542804 - L2 LINE L2 -1 3271 2853 262 197 0 14 chr2 179145641 179145712 -71542142 + AluS SINE Alu 232 301 0 461 292 51 56 chr2 179145728 179146050 -71541804 - L1ME4a LINE L1 -180 5941 5620 2035 141 0 13 chr2 179146050 179146349 -71541505 + AluSx SINE Alu 2 296 -16 461 292 51 56 chr2 179146349 179146440 -71541414 - L1ME4a LINE L1 -501 5620 5530 380 284 137 5 chr2 179146459 179146649 -71541205 - L1ME4a LINE L1 -2338 5470 5256 3061 85 0 20 chr2 179147156 179147601 -71540253 + L1PA13 LINE L1 5709 6144 -19 2150 139 0 3 chr2 179147712 179148015 -71539839 + AluSx SINE Alu 1 302 -10 670 261 207 55 chr2 179148387 179148483 -71539371 - L1MC4a LINE L1 -1846 5962 5882 1952 154 0 41 chr2 179148483 179148802 -71539052 + AluJb SINE Alu 1 306 -6 670 261 207 55 chr2 179148802 179149246 -71538608 - L1MC4a LINE L1 -1926 5882 5340 2265 102 0 3 chr2 179149314 179149609 -71538245 + AluSq SINE Alu 1 294 -19 525 274 130 43 chr2 179149698 179150422 -71537432 - L1MC4a LINE L1 -977 5169 4383 193 169 0 138 chr2 179150587 179150652 -71537202 + L2 LINE L2 3225 3280 -33 4598 181 30 55 chr2 179150746 179151122 -71536732 - MER45B DNA AcHobo -542 1039 655 1854 132 45 24 chr2 179151122 179151411 -71536443 - AluSx SINE Alu -15 297 3 4598 181 30 55 chr2 179151411 179151777 -71536077 - MER45B DNA AcHobo -926 655 330 2029 85 26 59 chr2 179151777 179152083 -71535771 - AluSx SINE Alu -16 296 1 4598 181 30 55 chr2 179152083 179152404 -71535450 - MER45B DNA AcHobo -1251 330 2 1244 201 51 79 chr2 179152660 179153002 -71534852 + MLT1B LTR MaLR 1 347 -49 2123 126 0 13 chr2 179153002 179153304 -71534550 - AluSx SINE Alu -8 304 7 1244 201 51 79 chr2 179153304 179153349 -71534505 + MLT1B LTR MaLR 347 392 -4 1049 271 100 19 chr2 179154091 179154673 -71533181 - L1MC4 LINE L1 -254 7788 7160 1139 206 18 5 chr2 179154986 179155205 -71532649 + MER58A DNA MER1_type 3 224 0 1068 227 35 4 chr2 179155331 179155560 -71532294 + MIR SINE MIR 2 237 -25 24 96 0 0 chr2 179155864 179155937 -71531917 + AT_rich Low_complexity Low_complexity 1 73 0 25 51 0 0 chr2 179155991 179156030 -71531824 + AT_rich Low_complexity Low_complexity 1 39 0 1656 150 86 11 chr2 179156409 179156689 -71531165 - AluJo SINE Alu -11 301 1 412 209 0 22 chr2 179157123 179157214 -71530640 + MER99 DNA DNA 9 97 -731 37 52 0 0 chr2 179157474 179157532 -71530322 + AT_rich Low_complexity Low_complexity 1 58 0 38922 73 3 6 chr2 179157693 179159398 -71528456 - L1PA5 LINE L1 -4 6150 4441 6448 62 3 25 chr2 179159398 179160266 -71527588 + SVA Other Other 535 1383 -3 38922 73 3 6 chr2 179160266 179164733 -71523121 - L1PA5 LINE L1 -1713 4441 1 2913 178 47 21 chr2 179164897 179165515 -71522339 + MER99 DNA DNA 192 825 -3 1029 147 94 6 chr2 179165571 179165741 -71522113 - AluJo SINE Alu -46 266 82 680 280 31 16 chr2 179166497 179166754 -71521100 + MLT1J LTR MaLR 8 268 -243 420 234 36 0 chr2 179166829 179166940 -71520914 + MLT1J LTR MaLR 385 499 -12 808 124 0 58 chr2 179166940 179167077 -71520777 - FLAM_C SINE Alu -1 132 4 324 319 70 19 chr2 179167103 179167260 -71520594 - L1ME4a LINE L1 -214 5907 5743 2085 105 0 52 chr2 179168742 179169047 -71518807 - AluSc SINE Alu -20 289 1 336 256 181 0 chr2 179169205 179169338 -71518516 + MER103 DNA DNA 2 158 -8 1675 122 113 127 chr2 179169646 179170080 -71517774 + MSTA LTR MaLR 1 428 0 421 311 62 45 chr2 179170086 179170263 -71517591 - MIR3 SINE MIR -7 201 22 2195 96 0 23 chr2 179170289 179170591 -71517263 - AluSg SINE Alu -15 295 1 751 196 0 0 chr2 179170611 179170744 -71517110 - FLAM_C SINE Alu 0 133 1 205 184 20 20 chr2 179170918 179170967 -71516887 - L2 LINE L2 0 3272 3224 742 320 120 28 chr2 179171486 179171911 -71515943 - L2 LINE L2 -655 2659 2196 1739 172 22 27 chr2 179172348 179172715 -71515139 - MLT1A1 LTR MaLR 0 365 1 183 80 0 0 chr2 179173267 179173292 -71514562 + (TA)n Simple_repeat Simple_repeat 1 25 0 1805 154 23 10 chr2 179173324 179173623 -71514231 - AluJb SINE Alu -9 303 1 379 301 77 31 chr2 179173711 179173907 -71513947 + MIR SINE MIR 2 206 -56 59 27 0 0 chr2 179173908 179173981 -71513873 + AT_rich Low_complexity Low_complexity 1 73 0 814 243 14 119 chr2 179174176 179174538 -71513316 - L2 LINE L2 0 3313 2990 1732 140 112 3 chr2 179174547 179174896 -71512958 - MLT1B LTR MaLR 0 390 4 837 289 152 5 chr2 179174910 179175291 -71512563 - L2 LINE L2 -349 2965 2529 191 320 13 27 chr2 179175301 179175376 -71512478 - L2 LINE L2 -4 3309 3236 1658 178 9 9 chr2 179175896 179176227 -71511627 + MER7A DNA MER2_type 17 345 -1 783 190 18 0 chr2 179176228 179176391 -71511463 - MLT1B LTR MaLR -32 358 193 12923 147 20 6 chr2 179176530 179177182 -71510672 - L1M1 LINE L1 -4441 3124 2482 1920 109 19 47 chr2 179177182 179177503 -71510351 - AluSx SINE Alu 0 312 1 12923 147 20 6 chr2 179177503 179179038 -71508816 - L1M1 LINE L1 -5083 2482 907 22 35 0 0 chr2 179180057 179180086 -71507768 + AT_rich Low_complexity Low_complexity 1 29 0 28540 87 13 6 chr2 179182237 179188346 -71499508 - L1PA6 LINE L1 -2 6152 11 2353 110 3 14 chr2 179188358 179188721 -71499133 - L1PB1 LINE L1 0 6151 5793 231 88 0 0 chr2 179188722 179188756 -71499098 + (TG)n Simple_repeat Simple_repeat 1 34 0 17713 155 41 11 chr2 179188766 179194245 -71493609 - L1PBa LINE L1 -1217 5645 1 853 144 20 0 chr2 179195545 179195691 -71492163 + Charlie1a DNA MER1_type 50 198 -1257 1312 123 137 0 chr2 179195725 179195952 -71491902 - LTR56 LTR ERV1 0 445 188 1786 99 15 0 chr2 179195960 179196222 -71491632 - LTR56 LTR ERV1 -171 274 9 596 225 89 30 chr2 179196280 179196449 -71491405 - MER21B LTR ERV1 -57 806 628 671 149 8 8 chr2 179196449 179196570 -71491284 - FLAM_A SINE Alu -2 140 20 981 270 41 50 chr2 179196609 179196927 -71490927 - MER21B LTR ERV1 -227 636 322 294 143 0 0 chr2 179196952 179197001 -71490853 - FLAM SINE Alu -15 118 70 1860 143 131 3 chr2 179197001 179197336 -71490518 - MER83B LTR ERV1 0 378 1 3133 176 25 60 chr2 179197342 179198417 -71489437 - MER83B-int LTR ERV1 -6 4874 3207 360 0 0 0 chr2 179198417 179198457 -71489397 + (TTA)n Simple_repeat Simple_repeat 3 42 0 41117 43 28 1 chr2 179198457 179204431 -71483423 - L1PA3 LINE L1 -18 6137 3 2603 124 2 26 chr2 179204431 179204858 -71482996 - MER83B-int LTR ERV1 -623 4257 3841 1752 141 60 54 chr2 179204863 179205231 -71482623 - THE1C LTR MaLR -4 371 2 1037 198 6 6 chr2 179205231 179205413 -71482441 - MER83B-int LTR ERV1 -3670 1210 1029 * 1582 303 50 28 chr2 179205386 179206219 -71481635 - MER83B-int LTR ERV1 -3073 1881 1030 1074 247 44 36 chr2 179206270 179206694 -71481160 - MER83B-int LTR ERV1 -3845 1035 628 413 254 36 0 chr2 179206696 179206806 -71481048 + MIR SINE MIR 148 261 -1 222 203 17 34 chr2 179208122 179208181 -71479673 - L2 LINE L2 0 3313 3256 1140 197 5 22 chr2 179208211 179208434 -71479420 + MER20 DNA MER1_type 1 219 0 9830 198 78 76 chr2 179208776 179211726 -71476128 - L1PA16 LINE L1 -2 6164 3219 1246 222 0 24 chr2 179211726 179211974 -71475880 - AluJb SINE Alu -23 289 48 9830 198 78 76 chr2 179211974 179212726 -71475128 - L1PA16 LINE L1 -2947 3219 2204 1811 165 0 29 chr2 179212726 179213035 -71474819 - AluJo SINE Alu -12 300 1 9830 198 78 76 chr2 179213035 179213507 -71474347 - L1PA16 LINE L1 -3962 2204 1734 327 278 0 0 chr2 179213510 179213582 -71474272 - U3 snRNA snRNA -131 86 15 939 45 0 0 chr2 179213582 179213693 -71474161 + AluY SINE Alu 192 302 -9 339 150 46 46 chr2 179214291 179214464 -71473390 + (TTATA)n Simple_repeat Simple_repeat 5 177 0 263 183 84 0 chr2 179214470 179214541 -71473313 + (CTATA)n Simple_repeat Simple_repeat 2 78 0 494 134 47 23 chr2 179214541 179214712 -71473142 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 385 81 75 40 chr2 179214756 179214930 -71472924 + (TA)n Simple_repeat Simple_repeat 1 180 0 189 169 58 19 chr2 179214907 179215061 -71472793 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 * 387 296 98 33 chr2 179215147 179215356 -71472498 - L1MC/D LINE L1 -481 5640 5465 405 198 0 0 chr2 179216454 179216545 -71471309 + CT-rich Low_complexity Low_complexity 2 92 0 469 219 29 58 chr2 179216549 179216686 -71471168 - FLAM_A SINE Alu 0 133 1 27 0 0 0 chr2 179217693 179217720 -71470134 + AT_rich Low_complexity Low_complexity 1 27 0 552 257 23 69 chr2 179217893 179218068 -71469786 - MER5B DNA MER1_type -10 168 2 228 35 0 0 chr2 179218099 179218128 -71469726 + (TG)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr2 179218370 179218392 -71469462 + AT_rich Low_complexity Low_complexity 1 22 0 509 309 63 0 chr2 179218631 179218806 -71469048 - MIR3 SINE MIR -5 203 18 837 267 107 1 chr2 179220283 179220666 -71467188 - L2 LINE L2 -158 3155 2713 192 388 97 0 chr2 179220668 179220802 -71467052 - L2 LINE L2 -10 3262 3116 677 194 8 22 chr2 179221895 179222029 -71465825 - FLAM_C SINE Alu -1 132 1 2737 159 16 2 chr2 179222162 179222660 -71465194 - L1MB7 LINE L1 -14 6170 5666 188 167 0 0 chr2 179223503 179223533 -71464321 - MIR SINE MIR -118 144 115 223 189 0 0 chr2 179224583 179224620 -71463234 + L2 LINE L2 3267 3303 -10 23 33 0 0 chr2 179224993 179225023 -71462831 + AT_rich Low_complexity Low_complexity 1 30 0 243 239 11 57 chr2 179225123 179225211 -71462643 - MIR SINE MIR -18 244 161 1433 169 69 0 chr2 179225418 179225679 -71462175 - AluJo SINE Alu -13 299 21 22 35 0 0 chr2 179226448 179226477 -71461377 + AT_rich Low_complexity Low_complexity 1 29 0 658 254 6 35 chr2 179226524 179226693 -71461161 + MER58B DNA MER1_type 176 339 -2 353 329 79 6 chr2 179226722 179226886 -71460968 + MIR SINE MIR 28 203 -59 * 1156 266 78 54 chr2 179226865 179227422 -71460432 - L2 LINE L2 0 3313 2748 259 326 149 0 chr2 179227422 179227563 -71460291 - L2 LINE L2 -669 2645 2484 436 222 132 24 chr2 179229148 179229315 -71458539 - L1ME1 LINE L1 -8 6158 5974 1212 250 30 35 chr2 179229337 179229831 -71458023 - MER21B LTR ERV1 -297 566 20 491 202 21 0 chr2 179229839 179229933 -71457921 - MER21B LTR ERV1 -767 96 1 1041 201 19 111 chr2 179229946 179230359 -71457495 - L1M4 LINE L1 -801 6140 5766 2164 103 27 0 chr2 179230386 179230678 -71457176 - AluSp SINE Alu -13 300 1 2478 252 95 34 chr2 179230681 179231876 -71455978 - L1MCc LINE L1 -3374 3567 2447 2364 169 26 12 chr2 179231876 179232302 -71455552 - Tigger2a DNA MER2_type -2 432 1 2478 252 95 34 chr2 179232302 179232322 -71455532 - L1MCc LINE L1 -4494 2447 2430 2103 114 17 3 chr2 179232322 179232620 -71455234 + AluSx SINE Alu 3 304 -8 2478 252 95 34 chr2 179232620 179233842 -71454012 - L1MCc LINE L1 -4511 2430 816 875 278 60 57 chr2 179233980 179234527 -71453327 - L1MCc LINE L1 -5849 574 26 27 0 0 0 chr2 179235422 179235449 -71452405 + AT_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr2 179236802 179236836 -71451018 + AT_rich Low_complexity Low_complexity 1 34 0 795 214 84 38 chr2 179237075 179237337 -71450517 - LTR37B LTR ERV1 0 468 195 2295 88 3 19 chr2 179237366 179237673 -71450181 - AluSg SINE Alu -8 302 1 26 82 0 0 chr2 179238088 179238149 -71449705 + AT_rich Low_complexity Low_complexity 1 61 0 2006 82 0 4 chr2 179238703 179238960 -71448894 - AluSc SINE Alu -15 294 39 1245 191 71 35 chr2 179239157 179239439 -71448415 + AluJo SINE Alu 1 292 -20 38 22 0 0 chr2 179239878 179239923 -71447931 + AT_rich Low_complexity Low_complexity 1 45 0 2049 121 14 7 chr2 179240222 179240511 -71447343 + AluSq SINE Alu 1 291 -22 23 0 0 0 chr2 179241756 179241779 -71446075 + AT_rich Low_complexity Low_complexity 1 23 0 405 95 16 0 chr2 179242741 179242804 -71445050 + L1 LINE L1 4771 4834 -1312 1878 171 11 0 chr2 179242890 179243269 -71444585 - L1 LINE L1 -1386 4760 4378 3700 129 21 3 chr2 179243275 179244180 -71443674 + L1P5 LINE L1 4872 5790 -361 232 219 0 0 chr2 179244187 179244251 -71443603 - L1MC4 LINE L1 -1339 6703 6640 2446 104 0 21 chr2 179244260 179244636 -71443218 + L1PB1 LINE L1 5782 6149 -2 994 193 0 0 chr2 179244748 179244909 -71442945 - FRAM SINE Alu -15 161 1 1516 134 9 17 chr2 179245163 179245395 -71442459 + AluSx SINE Alu 1 230 -82 349 244 131 18 chr2 179245430 179245598 -71442256 - L1 LINE L1 -3321 2825 2639 1180 219 110 21 chr2 179245660 179246043 -71441811 - L1MC5 LINE L1 -518 7443 7027 374 148 0 50 chr2 179246053 179246154 -71441700 + (TTCC)n Simple_repeat Simple_repeat 2 97 0 1410 190 51 0 chr2 179246162 179246415 -71441439 - AluJo SINE Alu -44 268 3 792 249 30 90 chr2 179246419 179246865 -71440989 - L1MC5 LINE L1 -940 7021 6625 282 299 94 30 chr2 179247174 179247609 -71440245 - L1M4 LINE L1 -2699 3447 2985 455 279 89 5 chr2 179247876 179248048 -71439806 - L1ME2 LINE L1 0 6164 5990 383 233 47 40 chr2 179248046 179248196 -71439658 - L1MCc LINE L1 -6222 201 51 * 539 274 86 25 chr2 179249231 179249476 -71438378 + MIR SINE MIR 1 260 -2 2361 84 7 0 chr2 179249541 179249839 -71438015 - AluSg SINE Alu -10 300 1 1576 190 35 0 chr2 179250149 179250433 -71437421 - AluJo SINE Alu -18 294 1 28 48 0 0 chr2 179250742 179250784 -71437070 + AT_rich Low_complexity Low_complexity 1 42 0 2462 81 0 0 chr2 179251296 179251604 -71436250 - AluY SINE Alu -3 308 1 1645 213 73 6 chr2 179251604 179252142 -71435712 - L1 LINE L1 -1116 5030 4415 1283 141 81 123 chr2 179253402 179253451 -71434403 + MER82 DNA MER2_type 305 355 -298 2217 97 7 0 chr2 179253451 179253750 -71434104 - AluSp SINE Alu -12 301 1 1612 175 17 31 chr2 179253752 179254044 -71433810 - AluJo SINE Alu -20 292 5 1283 141 81 123 chr2 179254044 179254325 -71433529 + MER82 DNA MER2_type 356 624 -29 185 269 26 51 chr2 179254871 179254949 -71432905 + L2 LINE L2 3193 3268 -4 1756 148 48 100 chr2 179256174 179256340 -71431514 - LTR47A LTR ERVL -55 397 224 4621 144 41 15 chr2 179256340 179257145 -71430709 + LTR1B LTR ERV1 1 826 0 1756 148 48 100 chr2 179257145 179257397 -71430457 - LTR47A LTR ERVL -228 224 1 603 97 0 43 chr2 179257643 179257736 -71430118 + AluJ/FLAM SINE Alu 1 89 -223 1131 187 84 59 chr2 179260177 179260498 -71427356 + MER2 DNA MER2_type 3 331 -14 22 0 0 0 chr2 179260543 179260565 -71427289 + AT_rich Low_complexity Low_complexity 1 22 0 561 310 21 11 chr2 179261424 179261611 -71426243 + MIR3 SINE MIR 20 208 0 24 0 0 0 chr2 179263702 179263726 -71424128 + AT_rich Low_complexity Low_complexity 1 24 0 202 351 0 13 chr2 179263991 179264068 -71423786 - MIR3 SINE MIR -13 195 120 490 200 73 60 chr2 179264325 179264475 -71423379 + L1MC5 LINE L1 7752 7903 -58 2338 100 0 0 chr2 179265588 179265897 -71421957 - AluSc SINE Alu 0 309 1 503 306 70 6 chr2 179266158 179266315 -71421539 - MER5A DNA MER1_type -2 187 21 1054 203 10 10 chr2 179266628 179266835 -71421019 - MER20 DNA MER1_type -1 218 12 278 297 178 0 chr2 179266885 179266986 -71420868 - L2 LINE L2 -5 3308 3190 3255 265 177 82 chr2 179266987 179268199 -71419655 - L2 LINE L2 -227 3086 1990 271 189 0 0 chr2 179268199 179268252 -71419602 - L1ME3 LINE L1 0 6162 6110 3255 265 177 82 chr2 179268252 179268707 -71419147 - L2 LINE L2 -1323 1990 1579 406 200 30 10 chr2 179268707 179268807 -71419047 + U13 snRNA snRNA 1 102 -2 3255 265 177 82 chr2 179268807 179269631 -71418223 - L2 LINE L2 -1734 1579 300 2131 111 0 19 chr2 179271430 179271737 -71416117 - AluSx SINE Alu -11 301 1 1611 139 139 51 chr2 179274040 179274092 -71413762 - MSTA LTR MaLR 0 428 382 2067 118 4 0 chr2 179274092 179274396 -71413458 - AluSg SINE Alu 0 305 1 1611 139 139 51 chr2 179274396 179274674 -71413180 - MSTA LTR MaLR -46 382 68 808 117 86 0 chr2 179274681 179274809 -71413045 - THE1C LTR MaLR -2 373 235 487 174 11 22 chr2 179274808 179274900 -71412954 - THE1C LTR MaLR -336 92 2 * 291 320 26 78 chr2 179275338 179275491 -71412363 + L2 LINE L2 2938 3082 -190 21 0 0 0 chr2 179275773 179275794 -71412060 + AT_rich Low_complexity Low_complexity 1 21 0 943 211 0 0 chr2 179276207 179276363 -71411491 + FRAM SINE Alu 1 153 -23 2172 114 0 0 chr2 179278056 179278353 -71409501 - AluSx SINE Alu -15 297 1 1613 207 3 3 chr2 179278584 179278879 -71408975 - AluJo SINE Alu -17 295 1 468 232 62 57 chr2 179280229 179280406 -71407448 - L1ME3A LINE L1 -5 6165 5988 705 97 0 0 chr2 179280463 179280556 -71407298 - AluY SINE Alu -14 297 205 21 0 0 0 chr2 179281031 179281052 -71406802 + AT_rich Low_complexity Low_complexity 1 21 0 415 255 39 59 chr2 179282038 179282191 -71405663 - MIR SINE MIR -108 154 5 2448 63 3 0 chr2 179282326 179282626 -71405228 + AluY SINE Alu 1 301 -10 756 234 84 35 chr2 179282759 179282985 -71404869 + MIR SINE MIR 5 241 -21 494 282 74 20 chr2 179283688 179283837 -71404017 + MIR3 SINE MIR 45 201 -7 38 61 0 0 chr2 179285582 179285648 -71402206 + AT_rich Low_complexity Low_complexity 1 66 0 363 323 107 20 chr2 179285705 179286005 -71401849 + L2 LINE L2 1668 1993 -1321 191 246 0 70 chr2 179286199 179286256 -71401598 + L2 LINE L2 2265 2317 -997 196 271 0 21 chr2 179288501 179288549 -71399305 + MIR SINE MIR 32 78 -184 1608 214 168 31 chr2 179290465 179291001 -71396853 - L1ME2 LINE L1 -19 6145 5546 632 253 149 0 chr2 179293161 179293315 -71394539 - MER5A DNA MER1_type 0 189 13 733 271 86 59 chr2 179293812 179294170 -71393684 - L1ME3A LINE L1 -221 5900 5524 3370 33 0 0 chr2 179294170 179294568 -71393286 + L1PA3 LINE L1 5756 6153 -2 733 271 86 59 chr2 179294568 179294831 -71393023 - L1ME3A LINE L1 -597 5524 5270 276 276 65 57 chr2 179295056 179295302 -71392552 - L1ME3A LINE L1 -1160 4986 4739 362 290 143 27 chr2 179296046 179296270 -71391584 + MIR SINE MIR 13 262 0 * 478 259 15 30 chr2 179296265 179296396 -71391458 + L2 LINE L2 3176 3304 -9 18242 162 46 49 chr2 179296446 179300779 -71387075 + L1MB4 LINE L1 19 4338 -3227 1449 128 0 5 chr2 179300781 179300992 -71386862 + L1P LINE L1 1 210 -5936 4828 154 17 23 chr2 179302671 179303686 -71384168 + L1MB4 LINE L1 6589 7598 -1 260 284 14 14 chr2 179304651 179304725 -71383129 - MIR SINE MIR -98 164 91 280 280 68 7 chr2 179305332 179305428 -71382426 - MIR3 SINE MIR -48 160 80 1916 95 7 7 chr2 179305508 179305782 -71382072 - L1PA11 LINE L1 0 6174 5901 766 154 0 0 chr2 179305882 179306005 -71381849 + AluSp/q SINE Alu 188 310 -3 1490 209 3 19 chr2 179306011 179306332 -71381522 + L1MB5 LINE L1 5488 5803 -381 287 143 0 18 chr2 179306357 179306413 -71381441 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 * 369 176 0 0 chr2 179306405 179306473 -71381381 + G-rich Low_complexity Low_complexity 5 72 0 1294 181 27 11 chr2 179306473 179306733 -71381121 + L1MB5 LINE L1 5824 6087 -87 2286 192 23 7 chr2 179306733 179307170 -71380684 + MER65C LTR ERV1 1 444 -17 550 113 0 0 chr2 179307182 179307262 -71380592 + L1MB5 LINE L1 6084 6163 -11 1830 157 38 3 chr2 179307322 179307665 -71380189 + L1MA4 LINE L1 5940 6294 -6 24 32 0 0 chr2 179307665 179307696 -71380158 + AT_rich Low_complexity Low_complexity 1 31 0 203 261 0 0 chr2 179307812 179307858 -71379996 + (CAT)n Simple_repeat Simple_repeat 3 48 0 627 199 55 0 chr2 179307902 179308048 -71379806 - L1ME LINE L1 -372 5790 5637 30 59 0 0 chr2 179308088 179308139 -71379715 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr2 179308179 179308202 -71379652 + AT_rich Low_complexity Low_complexity 1 23 0 516 286 152 47 chr2 179308387 179308542 -71379312 + MLT1I LTR MaLR 63 200 -209 2741 88 3 11 chr2 179308542 179308918 -71378936 + THE1C LTR MaLR 1 373 -2 516 286 152 47 chr2 179308918 179309059 -71378795 + MLT1I LTR MaLR 200 390 -19 2148 130 48 22 chr2 179309069 179309424 -71378430 - THE1B LTR MaLR 0 364 1 11281 101 10 1 chr2 179309424 179310989 -71376865 - THE1B-int LTR MaLR 0 1580 1 1986 125 65 31 chr2 179310989 179311341 -71376513 - THE1B LTR MaLR 0 364 1 2139 109 31 0 chr2 179311922 179312216 -71375638 - AluSx SINE Alu -9 303 1 181 305 168 54 chr2 179314318 179314633 -71373221 + L2 LINE L2 1806 2156 -1158 363 386 92 12 chr2 179315099 179315578 -71372276 + L2 LINE L2 2458 2974 -340 325 188 99 20 chr2 179315783 179315884 -71371970 - L1ME4a LINE L1 -4 6117 6009 393 22 0 0 chr2 179315891 179315937 -71371917 + (CA)n Simple_repeat Simple_repeat 1 46 0 959 204 22 0 chr2 179315959 179316140 -71371714 + MER58 DNA MER1_type 1 185 -156 511 255 60 109 chr2 179316258 179316607 -71371247 - L1ME4a LINE L1 -241 5880 5549 22 35 0 0 chr2 179316947 179316976 -71370878 + AT_rich Low_complexity Low_complexity 1 29 0 2138 119 7 0 chr2 179317568 179317863 -71369991 - AluSx SINE Alu -15 297 1 791 277 97 0 chr2 179319071 179319309 -71368545 + MIR SINE MIR 2 262 0 2068 124 0 3 chr2 179320480 179320779 -71367075 - AluSx SINE Alu -14 298 1 1652 121 102 4 chr2 179321376 179321655 -71366199 - AluSx SINE Alu 0 306 3 305 344 33 8 chr2 179322152 179322274 -71365580 + L3 LINE CR1 1447 1571 -6 248 286 91 63 chr2 179322820 179322995 -71364859 + MLT1K LTR MaLR 201 380 -208 25 0 0 0 chr2 179323381 179323406 -71364448 + AT_rich Low_complexity Low_complexity 1 25 0 192 268 36 0 chr2 179324012 179324068 -71363786 - L2 LINE L2 -2 3311 3254 500 296 25 19 chr2 179324257 179324416 -71363438 - MER5B DNA MER1_type -16 162 3 235 380 22 63 chr2 179324611 179324882 -71362972 + L2 LINE L2 2716 2975 -339 1986 183 21 28 chr2 179325069 179325495 -71362359 - L1PB1 LINE L1 -5144 1719 1297 14488 194 17 15 chr2 179325500 179326624 -71361230 + L1PB1 LINE L1 1718 2838 -4029 2167 120 0 3 chr2 179326624 179326916 -71360938 + AluSg SINE Alu 1 291 -19 14488 194 17 15 chr2 179326916 179329437 -71358417 + L1PB1 LINE L1 2838 5428 -1439 2328 77 30 10 chr2 179329437 179329735 -71358119 + AluY SINE Alu 5 308 -3 14488 194 17 15 chr2 179329735 179330798 -71357056 + L1PB1 LINE L1 5428 6487 -380 246 122 0 0 chr2 179330802 179330851 -71357003 - LTR66 LTR ERVL -158 452 404 285 70 76 44 chr2 179330863 179331021 -71356833 + (CATAT)n Simple_repeat Simple_repeat 4 166 0 427 112 2 87 chr2 179331034 179331660 -71356194 + (TA)n Simple_repeat Simple_repeat 1 572 0 270 75 75 15 chr2 179331661 179331728 -71356126 + (CATAT)n Simple_repeat Simple_repeat 5 75 0 2289 133 5 5 chr2 179331730 179332098 -71355756 + L1PB1 LINE L1 6497 6864 -3 209 363 49 10 chr2 179332282 179332384 -71355470 + L2 LINE L2 3199 3304 -9 1787 176 37 0 chr2 179335611 179335906 -71351948 - AluJb SINE Alu -6 306 1 313 239 91 11 chr2 179336434 179336522 -71351332 + MIR SINE MIR 50 144 -118 266 269 23 134 chr2 179338867 179339038 -71348816 + MIR SINE MIR 6 157 -105 * 859 224 17 0 chr2 179339031 179339210 -71348644 - MIR SINE MIR 0 262 81 2275 90 7 0 chr2 179339458 179339759 -71348095 - AluSg SINE Alu -7 303 1 181 338 108 0 chr2 179342406 179342480 -71345374 - L2 LINE L2 -3 3269 3188 723 262 98 13 chr2 179342511 179342736 -71345118 - MIR SINE MIR 0 262 19 205 279 115 3 chr2 179342878 179342970 -71344884 - MIR SINE MIR -63 145 75 295 296 84 21 chr2 179343339 179343481 -71344373 - L2 LINE L2 -2 3311 3161 241 312 93 93 chr2 179344142 179344443 -71343411 + L2 LINE L2 2965 3265 -7 430 252 0 29 chr2 179345931 179346034 -71341820 + L2 LINE L2 3214 3313 0 30 59 0 0 chr2 179346071 179346122 -71341732 + AT_rich Low_complexity Low_complexity 1 51 0 1688 152 44 27 chr2 179346172 179346469 -71341385 + AluJb SINE Alu 5 306 -6 25 90 0 0 chr2 179346594 179346661 -71341193 + AT_rich Low_complexity Low_complexity 1 67 0 1494 260 48 7 chr2 179346930 179347368 -71340486 + LTR40c LTR ERVL 5 460 -5 25 75 0 0 chr2 179347764 179347817 -71340037 + AT_rich Low_complexity Low_complexity 1 53 0 1721 186 10 3 chr2 179349395 179349691 -71338163 + AluJo SINE Alu 1 298 -14 1341 209 123 3 chr2 179350213 179350539 -71337315 + MLT1A1 LTR MaLR 1 365 0 413 62 231 0 chr2 179351013 179351078 -71336776 - MADE1 DNA Mariner 0 80 1 209 267 0 17 chr2 179351612 179351672 -71336182 - L2 LINE L2 0 3272 3214 1646 150 0 8 chr2 179351713 179351960 -71335894 + AluJb SINE Alu 7 251 -61 312 27 0 0 chr2 179351960 179351997 -71335857 + (CA)n Simple_repeat Simple_repeat 1 37 0 264 282 142 0 chr2 179352200 179352332 -71335522 - MIR SINE MIR -76 186 37 229 239 60 30 chr2 179352563 179352630 -71335224 + MIR SINE MIR 187 255 -7 358 243 10 19 chr2 179352832 179352935 -71334919 + MER103 DNA DNA 55 156 -10 921 258 18 9 chr2 179353444 179353665 -71334189 - MIR SINE MIR -25 237 15 2854 10 0 0 chr2 179354360 179354671 -71333183 - AluYa5 SINE Alu 0 311 1 23 0 0 0 chr2 179356978 179357001 -71330853 + AT_rich Low_complexity Low_complexity 1 23 0 274 356 10 0 chr2 179357306 179357410 -71330444 + MER5B DNA MER1_type 5 109 -69 197 299 90 49 chr2 179357321 179357465 -71330389 - MER5B DNA MER1_type -15 163 14 * 1415 109 66 23 chr2 179357948 179358205 -71329649 + L1MA5A LINE L1 6030 6297 0 282 336 16 39 chr2 179358837 179358965 -71328889 - L2 LINE L2 -182 3090 2966 245 286 65 52 chr2 179359476 179359630 -71328224 - L2 LINE L2 -2467 847 692 401 237 52 0 chr2 179361062 179361159 -71326695 + MER5A DNA MER1_type 11 112 -77 3895 224 18 10 chr2 179361293 179362263 -71325591 + L1MB5 LINE L1 4206 5182 -964 3887 190 43 12 chr2 179362266 179363080 -71324774 + L1MB5 LINE L1 5323 6161 -13 1857 153 30 3 chr2 179363151 179363451 -71324403 + AluSx SINE Alu 1 308 -4 369 264 35 49 chr2 179363488 179363632 -71324222 - MIR SINE MIR -72 190 49 240 284 102 23 chr2 179363727 179363903 -71323951 + L1ME4a LINE L1 5773 5962 -159 22 0 0 0 chr2 179364172 179364194 -71323660 + AT_rich Low_complexity Low_complexity 1 22 0 224 279 0 0 chr2 179364230 179364273 -71323581 + MER5B DNA MER1_type 105 147 -31 374 267 207 20 chr2 179364627 179364777 -71323077 - MER5A DNA MER1_type -2 187 10 189 381 72 14 chr2 179364875 179365014 -71322840 + L2 LINE L2 2614 2760 -554 610 227 8 162 chr2 179365014 179365261 -71322593 - MER102b DNA MER1_type -4 337 129 505 165 110 18 chr2 179365313 179365422 -71322432 + MER5B DNA MER1_type 59 177 -1 13475 187 16 14 chr2 179366388 179369985 -71317869 - L1PA14 LINE L1 -1 6160 2527 263 283 30 71 chr2 179370015 179370114 -71317740 - MIR SINE MIR -117 145 51 659 258 107 0 chr2 179370412 179370571 -71317283 + MER45A DNA AcHobo 2 177 -1 322 247 27 89 chr2 179371314 179371460 -71316394 + L1M4c LINE L1 1001 1137 -5247 207 379 0 0 chr2 179371982 179372048 -71315806 - L2 LINE L2 -13 3259 3194 273 311 67 0 chr2 179372192 179372282 -71315572 - L3 LINE CR1 -7 1570 1475 1563 204 3 25 chr2 179372939 179373257 -71314597 + AluJo SINE Alu 2 312 0 520 220 61 15 chr2 179373437 179373569 -71314285 - AluJo SINE Alu -92 220 83 3257 128 13 17 chr2 179373569 179374110 -71313744 + L1MC1 LINE L1 5795 6333 0 559 302 39 54 chr2 179375336 179375594 -71312260 + MIR SINE MIR 9 262 0 420 309 113 16 chr2 179376653 179376847 -71311007 - MIR SINE MIR -48 214 2 234 0 0 0 chr2 179377121 179377147 -71310707 + (CA)n Simple_repeat Simple_repeat 1 26 0 27 49 0 0 chr2 179377591 179377632 -71310222 + AT_rich Low_complexity Low_complexity 1 41 0 1044 165 35 119 chr2 179379026 179379197 -71308657 + MER33 DNA MER1_type 1 130 -2455 1667 166 7 14 chr2 179379197 179379486 -71308368 + AluJb SINE Alu 11 297 -15 1044 165 35 119 chr2 179379486 179379659 -71308195 + MER33 DNA MER1_type 130 316 -8 2316 159 48 7 chr2 179379815 179380230 -71307624 + MSTB1 LTR MaLR 1 432 0 274 371 60 0 chr2 179380554 179380705 -71307149 - MIR SINE MIR -33 229 70 855 257 31 4 chr2 179383591 179383817 -71304037 - MIR SINE MIR -15 247 16 296 243 51 102 chr2 179384289 179384424 -71303430 + L1ME LINE L1 5478 5603 -518 2408 71 0 3 chr2 179384424 179384721 -71303133 + AluY SINE Alu 1 296 -15 296 243 51 102 chr2 179384721 179384762 -71303092 + L1ME LINE L1 5603 5645 -476 217 230 50 90 chr2 179384910 179385010 -71302844 - MIR SINE MIR -70 192 97 1948 128 7 7 chr2 179386272 179386585 -71301269 + AluSx SINE Alu 1 313 0 235 259 117 25 chr2 179386696 179386893 -71300961 + L1ME LINE L1 5708 5922 -199 655 187 67 33 chr2 179387301 179387451 -71300403 - MIR SINE MIR -89 173 19 1637 186 3 26 chr2 179387560 179387871 -71299983 - AluJb SINE Alu -8 304 1 2044 111 24 0 chr2 179388153 179388442 -71299412 - AluSp SINE Alu -17 296 1 370 274 80 9 chr2 179388494 179388607 -71299247 - MIR SINE MIR -6 256 136 2459 155 10 0 chr2 179388607 179388994 -71298860 + L1MC1 LINE L1 5413 5803 -530 1120 201 0 14 chr2 179389006 179389215 -71298639 - AluJb SINE Alu -24 288 83 2852 138 29 49 chr2 179389215 179389765 -71298089 + L1MC1 LINE L1 5795 6333 0 22 0 0 0 chr2 179390062 179390084 -71297770 + AT_rich Low_complexity Low_complexity 1 22 0 2219 41 0 0 chr2 179390304 179390573 -71297281 + L1PA5 LINE L1 5884 6152 -2 396 330 95 28 chr2 179391062 179391234 -71296620 + L2 LINE L2 3001 3201 -112 1086 173 32 36 chr2 179391234 179391454 -71296400 + MER20 DNA MER1_type 1 219 0 396 330 95 28 chr2 179391454 179391566 -71296288 + L2 LINE L2 3201 3304 -9 25 51 0 0 chr2 179392825 179392864 -71294990 + AT_rich Low_complexity Low_complexity 1 39 0 509 276 68 43 chr2 179393157 179393436 -71294418 - Charlie8 DNA MER1_type -2131 286 1 256 281 212 15 chr2 179393589 179393863 -71293991 + L2 LINE L2 2407 2734 -580 384 45 0 45 chr2 179393863 179393929 -71293925 + (TTTC)n Simple_repeat Simple_repeat 1 63 0 183 129 0 0 chr2 179393941 179393972 -71293882 + (CA)n Simple_repeat Simple_repeat 1 31 0 241 271 200 12 chr2 179394271 179394356 -71293498 + L2 LINE L2 3134 3234 -38 209 108 0 27 chr2 179395525 179395562 -71292292 + (CA)n Simple_repeat Simple_repeat 2 37 0 32327 99 14 59 chr2 179396602 179402197 -71285657 + L1PA7 LINE L1 12 5265 -889 2138 107 0 23 chr2 179402197 179402505 -71285349 + AluSg SINE Alu 1 301 -9 32327 99 14 59 chr2 179402505 179403356 -71284498 + L1PA7 LINE L1 5265 6153 -1 25 31 0 0 chr2 179403358 179403390 -71284464 + AT_rich Low_complexity Low_complexity 1 32 0 406 354 39 6 chr2 179404010 179404191 -71283663 + L3 LINE CR1 1137 1323 -254 203 300 0 0 chr2 179404191 179404241 -71283613 - L3 LINE CR1 -239 1338 1289 408 306 18 0 chr2 179406076 179406187 -71281667 - L2 LINE L2 0 3272 3160 206 310 0 11 chr2 179406646 179406733 -71281121 + (TG)n Simple_repeat Simple_repeat 1 86 0 22 35 0 0 chr2 179407203 179407232 -71280622 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 179408141 179408162 -71279692 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 179408274 179408297 -71279557 + AT_rich Low_complexity Low_complexity 1 23 0 490 276 126 50 chr2 179410850 179411231 -71276623 + L1M4 LINE L1 2127 2536 -3610 21 36 0 0 chr2 179411365 179411393 -71276461 + AT_rich Low_complexity Low_complexity 1 28 0 416 273 87 61 chr2 179411511 179411579 -71276275 + L1M4 LINE L1 5 70 -6472 2026 81 0 4 chr2 179411579 179411839 -71276015 + AluY SINE Alu 40 298 -13 416 273 87 61 chr2 179411839 179412001 -71275853 + L1M4 LINE L1 70 241 -6301 * 4337 242 21 33 chr2 179411999 179412106 -71275748 + L1M4 LINE L1 2681 2788 -3856 703 136 27 68 chr2 179412106 179412253 -71275601 + L1MA9 LINE L1 6168 6308 -4 4337 242 21 33 chr2 179412253 179413009 -71274845 + L1M4 LINE L1 2788 3523 -3121 369 62 0 0 chr2 179413009 179413057 -71274797 + (TA)n Simple_repeat Simple_repeat 1 48 0 4337 242 21 33 chr2 179413057 179413607 -71274247 + L1M4 LINE L1 3523 4078 -2566 908 217 26 4 chr2 179413601 179413827 -71274027 + L1M4 LINE L1 4760 4990 -1654 * 42299 38 21 1 chr2 179413824 179419855 -71267999 + L1PA3 LINE L1 1 6155 0 3582 209 14 30 chr2 179419865 179420684 -71267170 + L1M4 LINE L1 4975 5786 -886 2081 128 0 0 chr2 179420684 179421017 -71266837 + AluSx SINE Alu 1 333 0 3582 209 14 30 chr2 179421017 179421222 -71266632 + L1M4 LINE L1 5786 5993 -679 573 118 29 10 chr2 179421229 179421331 -71266523 + AluSp SINE Alu 1 104 -209 1977 157 3 0 chr2 179421498 179421792 -71266062 + AluSx SINE Alu 1 295 -17 300 230 286 16 chr2 179422160 179422286 -71265568 + MIR SINE MIR 49 208 -54 1580 309 88 51 chr2 179424214 179424498 -71263356 + L2 LINE L2 982 1254 -2060 2360 138 17 56 chr2 179424498 179424693 -71263161 + MER65A LTR ERV1 1 202 -243 1477 142 0 26 chr2 179424693 179424926 -71262928 + AluJb SINE Alu 86 312 0 2360 138 17 56 chr2 179424926 179425193 -71262661 + MER65A LTR ERV1 202 445 0 1580 309 88 51 chr2 179425193 179425403 -71262451 + L2 LINE L2 1254 1455 -1859 3503 114 40 34 chr2 179425403 179425998 -71261856 + LTR26 LTR ERV1 1 599 -4 1580 309 88 51 chr2 179425998 179426228 -71261626 + L2 LINE L2 1455 1675 -1639 1760 124 68 91 chr2 179426228 179426624 -71261230 + MLT1B LTR MaLR 4 390 0 1580 309 88 51 chr2 179426624 179427236 -71260618 + L2 LINE L2 1675 2370 -944 500 320 47 74 chr2 179427568 179427824 -71260030 - MIR SINE MIR -13 249 1 786 212 57 57 chr2 179428104 179428297 -71259557 + MER58A DNA MER1_type 24 216 -8 218 167 0 42 chr2 179428433 179428481 -71259373 + GA-rich Low_complexity Low_complexity 2 47 0 213 252 99 18 chr2 179428493 179428604 -71259250 - MIR SINE MIR -141 121 2 276 344 130 26 chr2 179428740 179428970 -71258884 + L2 LINE L2 3019 3272 0 27 96 0 0 chr2 179429118 179429201 -71258653 + AT_rich Low_complexity Low_complexity 1 83 0 235 204 10 51 chr2 179429994 179430092 -71257762 + (TA)n Simple_repeat Simple_repeat 1 94 0 1056 224 72 14 chr2 179431288 179431511 -71256343 + MIR SINE MIR 2 237 -25 379 280 173 7 chr2 179431762 179431912 -71255942 + MIR SINE MIR 73 247 -15 30 0 0 0 chr2 179431990 179432020 -71255834 + AT_rich Low_complexity Low_complexity 1 30 0 1786 143 15 4 chr2 179432044 179432309 -71255545 + MER1B DNA MER1_type 57 324 -15 342 0 0 0 chr2 179432930 179432968 -71254886 + (TG)n Simple_repeat Simple_repeat 2 39 0 2389 85 0 3 chr2 179433379 179433685 -71254169 - AluSc SINE Alu -4 305 1 408 202 61 9 chr2 179433710 179433824 -71254030 + MER103 DNA DNA 44 163 -3 3153 92 8 47 chr2 179434876 179435179 -71252675 - L1P4 LINE L1 -392 5782 5505 1467 58 0 92 chr2 179435179 179435415 -71252439 - AluY SINE Alu 0 311 95 3153 92 8 47 chr2 179435415 179435620 -71252234 - L1P4 LINE L1 -669 5505 5293 13835 155 39 16 chr2 179435634 179436472 -71251382 + L1P LINE L1 2086 2904 -3242 2004 133 14 14 chr2 179436472 179436765 -71251089 - AluSx SINE Alu -19 293 1 13835 155 39 16 chr2 179436765 179438532 -71249322 + L1P LINE L1 2904 4749 -1397 6395 24 1 1 chr2 179439128 179439877 -71247977 - L1PA3 LINE L1 0 6155 5407 562 29 0 0 chr2 179439877 179439947 -71247907 + L1P LINE L1 5317 5386 -769 534 273 93 7 chr2 179440381 179440531 -71247323 + MER45C DNA AcHobo 52 214 -739 590 204 369 0 chr2 179440663 179440839 -71247015 + MER45C DNA AcHobo 713 953 0 23 0 0 0 chr2 179441525 179441548 -71246306 + AT_rich Low_complexity Low_complexity 1 23 0 276 130 0 0 chr2 179443678 179443724 -71244130 + (T)n Simple_repeat Simple_repeat 1 46 0 2547 87 124 10 chr2 179445704 179446106 -71241748 - LTR7 LTR ERV1 -2 448 1 2315 106 56 13 chr2 179446106 179446482 -71241372 - HERVH LTR ERV1 0 7713 7322 1410 134 19 0 chr2 179446480 179446696 -71241158 - HERVH LTR ERV1 -1894 5819 5600 * 4293 157 3 1 chr2 179446697 179447359 -71240495 - HERVH LTR ERV1 -2564 5149 4487 6264 84 5 2 chr2 179447360 179448212 -71239642 - HERVH LTR ERV1 -3720 3993 3140 * 16029 95 25 20 chr2 179448191 179451047 -71236807 - HERVH LTR ERV1 -4718 2995 1 2121 100 58 22 chr2 179451049 179451441 -71236413 - LTR7 LTR ERV1 -2 448 1 489 156 26 0 chr2 179451656 179451733 -71236121 + AluJ/FLAM SINE Alu 2 80 -232 513 188 0 0 chr2 179451735 179451815 -71236039 + AluSc SINE Alu 120 199 -110 4446 101 32 19 chr2 179451815 179452447 -71235407 - MER51C LTR ERV1 0 640 1 491 186 12 0 chr2 179452451 179452537 -71235317 - MER51A LTR ERV1 -547 87 1 790 115 9 0 chr2 179452538 179452651 -71235203 + FRAM SINE Alu 63 176 0 1276 208 66 4 chr2 179453999 179454273 -71233581 + L1PB4 LINE L1 5866 6156 0 260 308 0 11 chr2 179454329 179454420 -71233434 - MIR SINE MIR 0 262 173 204 200 0 0 chr2 179454456 179454491 -71233363 + (CA)n Simple_repeat Simple_repeat 2 36 0 931 79 40 59 chr2 179454761 179454913 -71232941 - LTR7 LTR ERV1 0 450 302 808 142 25 18 chr2 179455149 179455316 -71232538 - LTR7 LTR ERV1 -232 218 1 44727 39 3 2 chr2 179455334 179461478 -71226376 - L1PA3 LINE L1 0 6155 3 2556 144 44 2 chr2 179461548 179461959 -71225895 + MSTA LTR MaLR 1 428 0 244 333 27 0 chr2 179462083 179462158 -71225696 + MIR SINE MIR 161 237 -25 462 281 39 33 chr2 179462276 179462429 -71225425 - L2 LINE L2 0 3313 3160 550 246 15 8 chr2 179462670 179462800 -71225054 + MIR SINE MIR 103 233 -29 1001 283 82 64 chr2 179463249 179463396 -71224458 - L2 LINE L2 0 3313 3170 1438 200 10 26 chr2 179463396 179463706 -71224148 + AluJo SINE Alu 1 305 -7 1001 283 82 64 chr2 179463706 179464059 -71223795 - L2 LINE L2 -143 3170 2804 474 269 15 8 chr2 179464072 179464202 -71223652 - MER94 DNA DNA -3 131 1 300 273 122 29 chr2 179464206 179464345 -71223509 - L2 LINE L2 -517 2797 2646 2120 141 7 0 chr2 179465696 179465995 -71221859 + AluSx SINE Alu 1 301 -11 378 0 0 0 chr2 179465995 179466037 -71221817 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 338 288 9 128 chr2 179466517 179466736 -71221118 - MIR SINE MIR -7 255 63 2051 142 42 58 chr2 179467256 179467637 -71220217 + THE1C LTR MaLR 1 375 0 3873 123 30 13 chr2 179467642 179468245 -71219609 + HERVL LTR ERVL 5 617 -5037 1097 237 45 39 chr2 179468245 179468591 -71219263 + MLT2B3 LTR ERVL 212 554 0 272 148 49 16 chr2 179469542 179469603 -71218251 - L1MA3 LINE L1 0 6305 6243 915 138 36 0 chr2 179469607 179469745 -71218109 - L1MA2 LINE L1 -4 6300 6158 20354 133 19 92 chr2 179469760 179472387 -71215467 + L1P LINE L1 12 2829 -3317 2412 86 0 3 chr2 179472387 179472689 -71215165 + AluY SINE Alu 1 301 -10 20354 133 19 92 chr2 179472689 179473450 -71214404 + L1P LINE L1 2829 3048 -3098 2220 121 0 0 chr2 179473450 179473755 -71214099 + AluY SINE Alu 1 305 -6 20354 133 19 92 chr2 179473755 179474493 -71213361 + L1P LINE L1 3048 3838 -2308 7508 55 0 11 chr2 179474493 179475660 -71212194 + L1PA7 LINE L1 4990 6148 -6 12214 157 19 17 chr2 179475662 179475845 -71212009 - L1MA2 LINE L1 -148 6156 5975 2904 96 8 8 chr2 179475845 179476220 -71211634 - THE1C LTR MaLR 0 375 1 11146 107 36 9 chr2 179476220 179477759 -71210095 - THE1C-int LTR MaLR 0 1580 1 2971 91 5 3 chr2 179477759 179478133 -71209721 - THE1C LTR MaLR 0 375 1 12214 157 19 17 chr2 179478133 179480308 -71207546 - L1MA2 LINE L1 -329 5975 3790 2489 79 0 0 chr2 179480308 179480613 -71207241 - AluY SINE Alu -6 305 1 12214 157 19 17 chr2 179480613 179481498 -71206356 - L1MA2 LINE L1 -2514 3790 2908 42862 41 1 4 chr2 179481539 179487492 -71200362 - L1PA4 LINE L1 -3 6152 221 234 62 0 0 chr2 179488274 179488306 -71199548 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 191 250 96 0 chr2 179488307 179488359 -71199495 - L2 LINE L2 -13 3259 3203 259 294 73 79 chr2 179488746 179488923 -71198931 + MER5B DNA MER1_type 1 176 -2 1120 123 0 0 chr2 179488990 179489144 -71198710 - L1PA15 LINE L1 -2 6163 6010 2532 116 11 30 chr2 179489145 179489515 -71198339 + THE1B LTR MaLR 2 364 0 11644 95 21 1 chr2 179489515 179491058 -71196796 + THE1B-int LTR MaLR 1 1574 -6 2339 137 11 50 chr2 179491063 179491246 -71196608 + THE1B LTR MaLR 1 163 -201 2489 76 0 10 chr2 179491246 179491560 -71196294 + AluY SINE Alu 1 311 0 2339 137 11 50 chr2 179491560 179491755 -71196099 + THE1B LTR MaLR 163 364 0 691 139 8 0 chr2 179491755 179491878 -71195976 - L1PA15 LINE L1 -151 6014 5891 186 391 16 16 chr2 179492296 179492424 -71195430 + L2 LINE L2 1791 1918 -1396 374 289 167 6 chr2 179493231 179493387 -71194467 + MIR SINE MIR 82 262 0 23 0 0 0 chr2 179494068 179494091 -71193763 + AT_rich Low_complexity Low_complexity 1 23 0 636 212 148 5 chr2 179494880 179495097 -71192757 + MER33 DNA MER1_type 1 248 -76 1316 235 63 5 chr2 179495097 179495509 -71192345 - L1M4 LINE L1 -2702 3444 3009 186 0 88 0 chr2 179496879 179496913 -71190941 + (TA)n Simple_repeat Simple_repeat 2 38 0 1063 180 5 5 chr2 179497165 179497354 -71190500 - MER2 DNA MER2_type -155 190 2 263 241 58 11 chr2 179497727 179497814 -71190040 - MLT1L LTR MaLR -13 602 512 1931 80 11 0 chr2 179497923 179498187 -71189667 + L1PA13 LINE L1 5689 5955 -208 231 315 138 21 chr2 179498322 179498611 -71189243 - L1ME LINE L1 -461 5660 5338 1388 247 135 11 chr2 179499171 179499629 -71188225 - MLT1G1 LTR MaLR 0 595 81 2259 107 0 16 chr2 179499812 179500122 -71187732 - AluSq SINE Alu -8 305 1 519 303 23 6 chr2 179500441 179500616 -71187238 + MIR SINE MIR 6 183 -79 188 227 91 0 chr2 179500618 179500662 -71187192 + L2 LINE L2 3223 3270 -2 15286 32 1 0 chr2 179504062 179506665 -71181189 - L1PA3 LINE L1 0 6155 3552 1154 270 75 10 chr2 179506666 179507066 -71180788 - L1MEc LINE L1 -5949 447 22 212 0 36 0 chr2 179507305 179507333 -71180521 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 240 226 161 0 chr2 179507334 179507396 -71180458 - MIR SINE MIR -89 173 102 21 0 0 0 chr2 179507716 179507737 -71180117 + AT_rich Low_complexity Low_complexity 1 21 0 272 215 152 0 chr2 179508287 179508366 -71179488 + MIR SINE MIR 102 192 -70 1323 156 80 83 chr2 179508460 179508761 -71179093 - MER7A DNA MER2_type 0 346 49 1252 225 127 36 chr2 179509377 179509794 -71178060 - MSTB2 LTR MaLR 0 457 3 375 320 235 20 chr2 179510502 179510911 -71176943 - L2 LINE L2 0 3313 2817 628 203 35 81 chr2 179510944 179511173 -71176681 - MIR SINE MIR -34 228 15 22 0 0 0 chr2 179511230 179511252 -71176602 + AT_rich Low_complexity Low_complexity 1 22 0 457 269 31 16 chr2 179512557 179512750 -71175104 + L1ME4a LINE L1 5681 5876 -245 621 286 123 67 chr2 179512903 179513486 -71174368 - L1MEd LINE L1 -1137 1764 1164 429 20 0 0 chr2 179513984 179514034 -71173820 + (TG)n Simple_repeat Simple_repeat 1 50 0 225 0 0 0 chr2 179516035 179516060 -71171794 + (GA)n Simple_repeat Simple_repeat 2 26 0 586 228 56 12 chr2 179516463 179516625 -71171229 + MIR SINE MIR 92 260 -2 381 339 7 29 chr2 179516752 179516986 -71170868 + MIR SINE MIR 35 261 -1 234 226 57 0 chr2 179519622 179519675 -71168179 + Tigger6 DNA MER2_type 18 73 -1524 21 57 0 0 chr2 179522315 179522350 -71165504 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 179522422 179522451 -71165403 + AT_rich Low_complexity Low_complexity 1 29 0 875 220 35 131 chr2 179523076 179523586 -71164268 - MER4C LTR ERV1 0 465 5 189 196 22 43 chr2 179523954 179524000 -71163854 + L3 LINE CR1 1521 1565 -12 845 64 96 0 chr2 179524414 179524539 -71163315 - L1MA2 LINE L1 0 6304 6168 218 354 101 27 chr2 179524855 179525152 -71162702 + L2 LINE L2 944 1262 -2052 34 0 0 0 chr2 179525421 179525455 -71162399 + AT_rich Low_complexity Low_complexity 1 34 0 2076 120 11 0 chr2 179525461 179525744 -71162110 - AluSp SINE Alu -27 286 1 423 0 0 0 chr2 179525871 179525918 -71161936 + (TG)n Simple_repeat Simple_repeat 1 47 0 234 0 0 0 chr2 179525917 179525943 -71161911 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 1286 126 0 30 chr2 179525943 179526141 -71161713 - AluJb SINE Alu -34 278 87 278 270 132 29 chr2 179526210 179526384 -71161470 + L2 LINE L2 1806 1997 -1317 864 261 46 8 chr2 179526393 179526683 -71161171 - L1MB8 LINE L1 0 6184 5878 524 290 95 15 chr2 179527043 179527269 -71160585 - MIR SINE MIR -19 243 2 202 382 42 24 chr2 179527277 179527489 -71160365 + L2 LINE L2 2514 2729 -585 255 230 23 58 chr2 179528065 179528152 -71159702 + L2 LINE L2 3008 3091 -181 301 305 86 8 chr2 179528254 179528382 -71159472 - L2 LINE L2 -211 3061 2924 21 36 0 0 chr2 179529178 179529206 -71158648 + AT_rich Low_complexity Low_complexity 1 28 0 1486 158 3 76 chr2 179529215 179529519 -71158335 + AluJo SINE Alu 1 282 -30 329 0 0 24 chr2 179529522 179529564 -71158290 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 1483 319 192 32 chr2 179530336 179531674 -71156180 - L3 LINE CR1 -24 1553 2 256 271 59 85 chr2 179532114 179532239 -71155615 - L1MCc LINE L1 -4902 1521 1394 2187 131 0 0 chr2 179532239 179532551 -71155303 - AluSx SINE Alu 0 312 1 256 271 59 85 chr2 179532551 179532779 -71155075 - L1MCc LINE L1 -5029 1394 1177 25 0 0 0 chr2 179534296 179534321 -71153533 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 179534598 179534623 -71153231 + AT_rich Low_complexity Low_complexity 1 25 0 1852 136 30 38 chr2 179535726 179536094 -71151760 + L1MB4 LINE L1 5814 6178 -2 184 286 13 26 chr2 179537445 179537522 -71150332 - L3b LINE CR1 -326 1257 1182 2185 131 0 0 chr2 179537579 179537885 -71149969 - AluSx SINE Alu -6 306 1 226 346 137 20 chr2 179538792 179538945 -71148909 + L2 LINE L2 2768 2938 -376 180 0 0 0 chr2 179539206 179539226 -71148628 + (T)n Simple_repeat Simple_repeat 1 20 0 1196 200 84 9 chr2 179539722 179540067 -71147787 + Charlie5 DNA MER1_type 2254 2624 0 282 255 0 75 chr2 179540070 179540164 -71147690 - MIR3 SINE MIR -14 194 108 1746 125 80 15 chr2 179540356 179540675 -71147179 + AluSg SINE Alu 3 338 0 279 343 0 0 chr2 179543090 179543163 -71144691 + polypyrimidine Low_complexity Low_complexity 3 75 0 250 282 24 35 chr2 179544047 179544132 -71143722 - MIR3 SINE MIR -6 202 119 1628 167 3 52 chr2 179545583 179545703 -71142151 + AluJo SINE Alu 9 133 -179 2295 103 0 0 chr2 179545703 179546003 -71141851 - AluSx SINE Alu -12 300 1 1628 167 3 52 chr2 179546003 179546188 -71141666 + AluJo SINE Alu 133 299 -13 646 122 0 19 chr2 179546702 179546809 -71141045 + FLAM_C SINE Alu 39 143 0 1909 95 24 0 chr2 179546819 179547072 -71140782 - AluSx SINE Alu -19 293 35 24 32 0 0 chr2 179547716 179547747 -71140107 + AT_rich Low_complexity Low_complexity 1 31 0 1064 138 6 0 chr2 179548691 179548865 -71138989 - L1MB3 LINE L1 -2 6181 6007 2050 135 14 0 chr2 179550472 179550761 -71137093 + AluSx SINE Alu 1 293 -19 335 169 14 0 chr2 179550763 179550834 -71137020 + GA-rich Low_complexity Low_complexity 1 72 0 25 31 0 0 chr2 179551674 179551706 -71136148 + AT_rich Low_complexity Low_complexity 1 32 0 562 229 72 7 chr2 179552140 179552293 -71135561 - L1ME LINE L1 -462 5659 5497 2395 57 0 0 chr2 179552809 179553114 -71134740 - AluY SINE Alu 0 305 1 513 269 157 5 chr2 179555108 179555331 -71132523 + L2 LINE L2 3057 3313 0 2063 153 18 40 chr2 179555636 179556035 -71131819 - MLT1B LTR MaLR 0 390 1 429 244 120 65 chr2 179556063 179556132 -71131722 + MIR SINE MIR 34 98 -164 2310 108 0 0 chr2 179556132 179556428 -71131426 - AluSx SINE Alu -11 301 6 429 244 120 65 chr2 179556428 179556575 -71131279 + MIR SINE MIR 98 262 0 219 320 61 27 chr2 179556771 179556918 -71130936 - L2 LINE L2 -433 2881 2730 202 353 15 0 chr2 179557054 179557122 -71130732 - L2 LINE L2 0 3313 3245 416 286 43 36 chr2 179557937 179558077 -71129777 + MIR SINE MIR 3 143 -119 193 318 16 0 chr2 179559182 179559245 -71128609 + L2 LINE L2 2992 3055 -217 1779 193 43 6 chr2 179559293 179559645 -71128209 - MLT1A1 LTR MaLR 0 365 1 1938 145 0 3 chr2 179559800 179560109 -71127745 - AluJb SINE Alu 0 308 1 189 382 36 36 chr2 179560593 179560703 -71127151 - MIR3 SINE MIR -87 121 12 811 106 49 0 chr2 179562902 179563025 -71124829 - MER20 DNA MER1_type 0 219 91 439 271 121 24 chr2 179563996 179564162 -71123692 - MIR3 SINE MIR -6 202 21 2053 131 40 0 chr2 179565424 179565722 -71122132 + AluSq SINE Alu 1 310 -3 261 145 0 43 chr2 179565782 179565851 -71122003 - L1MA4 LINE L1 0 6300 6235 645 332 81 19 chr2 179565925 179566235 -71121619 + L3 LINE CR1 353 681 -896 290 298 61 76 chr2 179566240 179566371 -71121483 + L3 LINE CR1 916 1044 -533 495 323 192 9 chr2 179567111 179567445 -71120409 + L3 LINE CR1 1130 1524 -53 1156 111 17 39 chr2 179567749 179567929 -71119925 - AluSq SINE Alu -3 310 135 2168 119 0 0 chr2 179567929 179568223 -71119631 - AluY SINE Alu -15 296 3 433 301 14 42 chr2 179568674 179568817 -71119037 + L2 LINE L2 3134 3272 0 1355 141 28 28 chr2 179568868 179569123 -71118731 + L1MB3 LINE L1 5922 6176 -7 216 103 103 0 chr2 179569312 179569351 -71118503 - MIR3 SINE MIR -48 160 118 414 289 48 72 chr2 179572274 179572482 -71115372 - Charlie8 DNA MER1_type -2214 203 1 1243 191 0 37 chr2 179572502 179572743 -71115111 + AluJo SINE Alu 26 257 -55 22 35 0 0 chr2 179573546 179573575 -71114279 + AT_rich Low_complexity Low_complexity 1 29 0 211 282 141 14 chr2 179573906 179574048 -71113806 + MIR SINE MIR 22 181 -81 21 0 0 0 chr2 179574754 179574775 -71113079 + AT_rich Low_complexity Low_complexity 1 21 0 1512 127 181 0 chr2 179574864 179575124 -71112730 - AluSg SINE Alu -3 307 1 340 24 0 0 chr2 179575909 179575950 -71111904 + U7 snRNA snRNA 3 43 -20 244 309 116 78 chr2 179576373 179576820 -71111034 + L2 LINE L2 2805 3268 -4 955 218 40 91 chr2 179579233 179579586 -71108268 + MLT1C LTR MaLR 133 467 0 2802 256 78 13 chr2 179579998 179581519 -71106335 + L1M4 LINE L1 2636 4295 -1851 1950 115 51 3 chr2 179582711 179583007 -71104847 - AluSx SINE Alu -2 310 1 252 0 0 0 chr2 179583267 179583295 -71104559 + (TG)n Simple_repeat Simple_repeat 2 29 0 6656 25 3 0 chr2 179584937 179585711 -71102143 - L1PA5 LINE L1 0 6154 5379 288 372 51 0 chr2 179585713 179585850 -71102004 + MIR3 SINE MIR 45 188 -20 23 54 0 0 chr2 179586070 179586107 -71101747 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr2 179587348 179587373 -71100481 + AT_rich Low_complexity Low_complexity 1 25 0 1156 180 18 14 chr2 179587562 179587779 -71100075 - MER20 DNA MER1_type 0 219 2 4862 74 11 0 chr2 179588446 179589083 -71098771 + L1PA10 LINE L1 5523 6166 -2 210 118 0 0 chr2 179589097 179589131 -71098723 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 2056 129 0 0 chr2 179589254 179589533 -71098321 + AluSx SINE Alu 1 279 -33 332 94 19 0 chr2 179589540 179589593 -71098261 + (GGGA)n Simple_repeat Simple_repeat 4 57 0 4324 148 20 4 chr2 179590609 179591343 -71096511 + L1MC2 LINE L1 5449 6194 -150 238 214 0 0 chr2 179591343 179591385 -71096469 - MER90 LTR ERV1 -572 42 1 1268 130 14 37 chr2 179591579 179591794 -71096060 - MER2 DNA MER2_type -134 211 2 1962 156 28 41 chr2 179592177 179592387 -71095467 - MLT1B LTR MaLR -3 387 183 1676 181 0 32 chr2 179592387 179592702 -71095152 - AluJo SINE Alu -5 307 3 1962 156 28 41 chr2 179592702 179592883 -71094971 - MLT1B LTR MaLR -207 183 1 569 342 167 10 chr2 179593091 179593678 -71094176 - L2 LINE L2 -652 2662 1984 1876 201 20 0 chr2 179594091 179594449 -71093405 - MLT1A1 LTR MaLR 0 365 1 343 314 88 7 chr2 179595113 179595250 -71092604 - MIR SINE MIR -114 148 1 380 282 82 41 chr2 179596253 179596423 -71091431 - MIR SINE MIR -21 241 65 294 291 18 27 chr2 179596917 179597027 -71090827 + L2 LINE L2 3190 3298 -15 331 318 8 40 chr2 179597253 179597379 -71090475 + L2 LINE L2 3151 3272 0 194 273 0 0 chr2 179597412 179597456 -71090398 + L2 LINE L2 3262 3305 -8 213 91 36 36 chr2 179597778 179597833 -71090021 + T-rich Low_complexity Low_complexity 4 58 0 1495 75 58 35 chr2 179597896 179597945 -71089909 - MLT2A1 LTR ERVL 0 444 398 186 103 0 0 chr2 179597945 179597974 -71089880 + (TA)n Simple_repeat Simple_repeat 2 30 0 1495 75 58 35 chr2 179597974 179598150 -71089704 - MLT2A1 LTR ERVL -46 398 214 2220 118 0 3 chr2 179601992 179602296 -71085558 - AluSx SINE Alu -9 303 1 21 0 0 0 chr2 179603298 179603319 -71084535 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 179603567 179603596 -71084258 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr2 179603719 179603754 -71084100 + AT_rich Low_complexity Low_complexity 1 35 0 399 281 9 9 chr2 179604709 179604823 -71083031 + MIR SINE MIR 18 131 -77 250 296 14 14 chr2 179605573 179605644 -71082210 - MER5A DNA MER1_type -111 78 8 24 0 0 0 chr2 179606203 179606227 -71081627 + AT_rich Low_complexity Low_complexity 1 24 0 906 96 0 8 chr2 179607921 179608046 -71079808 - LTR1 LTR ERV1 0 785 662 * 1185 119 76 9 chr2 179608045 179608255 -71079599 - LTR1 LTR ERV1 -551 234 11 287 301 154 6 chr2 179608543 179608699 -71079155 - MIR SINE MIR 0 262 84 553 278 12 39 chr2 179609225 179609480 -71078374 + L1M4 LINE L1 4736 4983 -1163 292 363 88 6 chr2 179609622 179609782 -71078072 - MER91B DNA MER1_type -1 189 17 326 176 0 44 chr2 179611591 179611659 -71076195 - MER103 DNA DNA -39 127 63 1541 114 18 5 chr2 179613582 179613801 -71074053 - AluSg/x SINE Alu -15 297 76 199 279 16 0 chr2 179614570 179614631 -71073223 + MIR3 SINE MIR 145 206 -2 226 253 93 0 chr2 179614793 179614868 -71072986 + MIR3 SINE MIR 126 207 -1 348 127 0 0 chr2 179615821 179615876 -71071978 + (CA)n Simple_repeat Simple_repeat 2 56 0 29 0 0 0 chr2 179622345 179622374 -71065480 + AT_rich Low_complexity Low_complexity 1 29 0 239 269 71 64 chr2 179623992 179624133 -71063721 + L2 LINE L2 2918 3059 -213 219 69 0 0 chr2 179627347 179627376 -71060478 + (TA)n Simple_repeat Simple_repeat 2 30 0 1747 163 0 33 chr2 179627454 179627761 -71060093 + AluJb SINE Alu 5 301 -11 1510 157 38 44 chr2 179628401 179628719 -71059135 + L1MB8 LINE L1 5747 6062 -116 21 0 0 0 chr2 179628835 179628856 -71058998 + AT_rich Low_complexity Low_complexity 1 21 0 44 0 0 0 chr2 179632458 179632502 -71055352 + AT_rich Low_complexity Low_complexity 1 44 0 252 258 106 33 chr2 179632846 179632997 -71054857 - L2 LINE L2 0 3313 3152 22 35 0 0 chr2 179633120 179633149 -71054705 + AT_rich Low_complexity Low_complexity 1 29 0 285 51 0 0 chr2 179634418 179634457 -71053397 + (CA)n Simple_repeat Simple_repeat 1 39 0 457 320 80 10 chr2 179635496 179635696 -71052158 - MER102b DNA MER1_type 0 341 128 244 368 17 0 chr2 179635778 179635895 -71051959 - MIR SINE MIR -71 191 73 384 287 96 36 chr2 179637750 179637917 -71049937 - MIR SINE MIR -56 206 30 442 361 18 22 chr2 179638055 179638282 -71049572 - L2 LINE L2 -778 2536 2311 899 169 109 34 chr2 179639187 179639454 -71048400 + L1MB8 LINE L1 5891 6177 -1 278 284 0 12 chr2 179640585 179640666 -71047188 + MIR SINE MIR 112 191 -71 219 260 0 0 chr2 179642088 179642138 -71045716 - MIR SINE MIR -110 152 103 231 179 134 0 chr2 179643636 179643703 -71044151 + L1MB2 LINE L1 6095 6170 -1 254 304 235 0 chr2 179644114 179644216 -71043638 + L2 LINE L2 3188 3313 0 227 330 50 0 chr2 179644237 179644337 -71043517 + MIR SINE MIR 156 260 -2 211 259 83 46 chr2 179644709 179644817 -71043037 + MIR SINE MIR 150 261 -1 247 333 215 18 chr2 179645847 179646075 -71041779 - L2 LINE L2 -5 3267 2995 208 339 24 60 chr2 179646256 179646504 -71041350 - L2 LINE L2 -527 2787 2549 333 0 0 0 chr2 179646752 179646789 -71041065 + (CA)n Simple_repeat Simple_repeat 1 37 0 494 283 21 53 chr2 179646910 179647097 -71040757 - MIR SINE MIR -25 237 57 1872 106 49 0 chr2 179647123 179647388 -71040466 - AluSg SINE Alu -32 278 1 2104 123 0 26 chr2 179651894 179652202 -71035652 + AluSx SINE Alu 3 302 -10 23 33 0 0 chr2 179654713 179654743 -71033111 + AT_rich Low_complexity Low_complexity 1 30 0 228 262 42 60 chr2 179662807 179662975 -71024879 - MER104 DNA Tc2 -15 165 1 33 25 0 0 chr2 179665655 179665695 -71022159 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr2 179668699 179668727 -71019127 + AT_rich Low_complexity Low_complexity 1 28 0 2214 118 0 0 chr2 179670033 179670339 -71017515 + AluY SINE Alu 1 306 -5 449 188 0 10 chr2 179670461 179670562 -71017292 + CT-rich Low_complexity Low_complexity 1 100 0 245 327 39 10 chr2 179682296 179682400 -71005454 + L3b LINE CR1 1397 1503 -80 220 211 0 0 chr2 179682874 179682926 -71004928 + A-rich Low_complexity Low_complexity 1 52 0 318 0 0 0 chr2 179686185 179686225 -71001629 + L1PA3 LINE L1 6112 6151 -4 27 29 0 0 chr2 179690687 179690721 -70997133 + AT_rich Low_complexity Low_complexity 1 34 0 311 0 26 0 chr2 179694206 179694245 -70993609 + (TTTTG)n Simple_repeat Simple_repeat 5 44 0 2088 131 0 3 chr2 179697165 179697463 -70990391 - AluSx SINE Alu -15 297 1 23 33 0 0 chr2 179698212 179698242 -70989612 + AT_rich Low_complexity Low_complexity 1 30 0 1155 149 82 5 chr2 179701201 179701483 -70986371 - MER2 DNA MER2_type 0 345 1 31 26 0 0 chr2 179704262 179704300 -70983554 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 179706716 179706738 -70981116 + AT_rich Low_complexity Low_complexity 1 22 0 2372 40 40 10 chr2 179707611 179707910 -70979944 + AluY SINE Alu 1 308 -3 2609 45 0 0 chr2 179707915 179708226 -70979628 + AluY SINE Alu 1 311 0 9686 43 22 0 chr2 179709030 179710251 -70977603 - L1P LINE L1 -1138 5008 3761 26 30 0 0 chr2 179712118 179712151 -70975703 + AT_rich Low_complexity Low_complexity 1 33 0 7069 49 24 1 chr2 179712151 179713629 -70974225 - L1PA4 LINE L1 -11 6144 4648 573 241 25 59 chr2 179713850 179714136 -70973718 + AluY SINE Alu 36 311 0 246 62 0 0 chr2 179714573 179714605 -70973249 + (T)n Simple_repeat Simple_repeat 1 32 0 3384 125 32 14 chr2 179714993 179715587 -70972267 - L1MA7 LINE L1 0 6291 5687 213 359 0 0 chr2 179717464 179717609 -70970245 + GA-rich Low_complexity Low_complexity 1 145 0 210 37 0 0 chr2 179718538 179718565 -70969289 + (GA)n Simple_repeat Simple_repeat 2 28 0 1543 178 95 52 chr2 179720168 179720568 -70967286 - MER63B DNA MER1_type -5 431 15 245 163 75 25 chr2 179722692 179722772 -70965082 + (CATATA)n Simple_repeat Simple_repeat 6 89 0 216 0 0 0 chr2 179724494 179724518 -70963336 + (A)n Simple_repeat Simple_repeat 1 24 0 24 53 0 0 chr2 179725821 179725859 -70961995 + AT_rich Low_complexity Low_complexity 1 38 0 1810 165 11 0 chr2 179726809 179727094 -70960760 + AluJo SINE Alu 3 290 -22 2813 3 0 0 chr2 179727102 179727408 -70960446 + AluYa5 SINE Alu 1 306 -5 345 93 0 0 chr2 179729269 179729323 -70958531 + (TTG)n Simple_repeat Simple_repeat 2 55 0 202 211 0 0 chr2 179730874 179730912 -70956942 + A-rich Low_complexity Low_complexity 3 40 0 31 0 0 0 chr2 179734877 179734908 -70952946 + AT_rich Low_complexity Low_complexity 1 31 0 234 0 0 0 chr2 179736160 179736186 -70951668 + (TA)n Simple_repeat Simple_repeat 2 27 0 24 100 0 0 chr2 179736593 179736673 -70951181 + AT_rich Low_complexity Low_complexity 1 80 0 252 337 25 61 chr2 179736803 179736966 -70950888 + MIR SINE MIR 51 207 -55 575 63 13 0 chr2 179737239 179737318 -70950536 - MADE1 DNA Mariner 0 80 1 26 0 0 0 chr2 179737740 179737766 -70950088 + AT_rich Low_complexity Low_complexity 1 26 0 37 23 0 0 chr2 179738878 179738922 -70948932 + AT_rich Low_complexity Low_complexity 1 44 0 31 58 0 0 chr2 179739059 179739111 -70948743 + AT_rich Low_complexity Low_complexity 1 52 0 28 29 0 0 chr2 179740223 179740258 -70947596 + AT_rich Low_complexity Low_complexity 1 35 0 219 276 0 0 chr2 179741296 179741372 -70946482 + GA-rich Low_complexity Low_complexity 2 77 0 22 0 0 0 chr2 179742749 179742771 -70945083 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 179743052 179743073 -70944781 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 179743174 179743212 -70944642 + AT_rich Low_complexity Low_complexity 1 38 0 2185 110 0 10 chr2 179744766 179745074 -70942780 - AluSx SINE Alu -7 305 1 183 224 163 82 chr2 179747832 179747930 -70939924 - L2 LINE L2 0 3313 3208 27 62 0 0 chr2 179755597 179755645 -70932209 + AT_rich Low_complexity Low_complexity 1 48 0 2256 106 0 7 chr2 179756287 179756590 -70931264 + AluSx SINE Alu 1 301 -11 291 357 41 47 chr2 179756592 179756890 -70930964 - L2 LINE L2 -298 2974 2682 245 359 0 0 chr2 179757164 179757242 -70930612 - L2 LINE L2 -1022 2292 2215 204 40 0 0 chr2 179757934 179757959 -70929895 + (TA)n Simple_repeat Simple_repeat 1 25 0 387 0 0 0 chr2 179758849 179758892 -70928962 + (TA)n Simple_repeat Simple_repeat 2 44 0 24 32 0 0 chr2 179761308 179761339 -70926515 + AT_rich Low_complexity Low_complexity 1 31 0 27 29 0 0 chr2 179762032 179762066 -70925788 + AT_rich Low_complexity Low_complexity 1 34 0 934 98 0 0 chr2 179765638 179765781 -70922073 + L1MB4 LINE L1 6038 6180 0 710 153 0 0 chr2 179766038 179766149 -70921705 + L1PA16 LINE L1 6047 6157 -9 375 250 17 50 chr2 179766381 179766501 -70921353 + MER5C DNA MER1_type 45 160 -164 63 75 0 0 chr2 179766513 179766646 -70921208 + AT_rich Low_complexity Low_complexity 1 133 0 396 0 0 0 chr2 179767744 179767788 -70920066 + (TA)n Simple_repeat Simple_repeat 2 45 0 180 0 0 0 chr2 179776791 179776811 -70911043 + (CAA)n Simple_repeat Simple_repeat 2 21 0 370 340 115 31 chr2 179776838 179777159 -70910695 + L3b LINE CR1 1232 1579 -4 27 62 0 0 chr2 179777813 179777861 -70909993 + AT_rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr2 179777922 179777944 -70909910 + AT_rich Low_complexity Low_complexity 1 22 0 211 254 17 17 chr2 179778972 179779031 -70908823 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 1365 30 42 0 chr2 179779146 179779312 -70908542 - L1P1 LINE L1 -346 5809 5637 1060 31 0 0 chr2 179779312 179779429 -70908425 + L1PA3 LINE L1 6029 6155 0 5472 52 28 7 chr2 179781831 179782544 -70905310 + SVA Other Other 657 1384 -2 197 0 71 0 chr2 179782548 179782576 -70905278 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 629 283 77 88 chr2 179782602 179783196 -70904658 - L1ME4a LINE L1 -16 6105 5518 23 65 0 16 chr2 179783355 179783383 -70904471 + AT_rich Low_complexity Low_complexity 1 28 -33 1731 185 0 20 chr2 179783383 179783680 -70904174 + AluJo SINE Alu 1 291 -21 23 65 0 16 chr2 179783680 179783713 -70904141 + AT_rich Low_complexity Low_complexity 28 61 0 269 218 49 141 chr2 179784060 179784202 -70903652 - L1ME4a LINE L1 -16 6105 5977 385 254 61 55 chr2 179784264 179784429 -70903425 + MIR SINE MIR 81 246 -16 2014 83 0 70 chr2 179785406 179785708 -70902146 + AluY SINE Alu 16 296 -15 222 254 51 0 chr2 179785713 179785772 -70902082 - MIR SINE MIR -89 173 112 1509 260 29 24 chr2 179786221 179786675 -70901179 - LTR40a LTR ERVL 0 519 64 964 27 0 0 chr2 179786684 179786796 -70901058 - L1PA6 LINE L1 -16 6138 6027 208 329 88 75 chr2 179786805 179787033 -70900821 + L2 LINE L2 2826 3056 -216 182 268 219 8 chr2 179787571 179787694 -70900160 + L2 LINE L2 3148 3296 -17 407 181 213 106 chr2 179789469 179789629 -70898225 - MER5B DNA MER1_type -1 177 1 260 119 48 0 chr2 179790323 179790365 -70897489 - MER5A DNA MER1_type -91 98 55 7493 27 10 0 chr2 179790376 179791863 -70895991 + L1PA4 LINE L1 4696 6192 0 191 138 0 0 chr2 179791870 179791899 -70895955 - MER5C DNA MER1_type -292 32 4 1988 100 36 0 chr2 179792672 179792952 -70894902 - AluSx SINE Alu -22 290 1 1118 317 149 20 chr2 179793643 179794536 -70893318 - L2 LINE L2 0 3313 2282 1902 126 70 0 chr2 179796558 179796844 -70891010 + AluSg SINE Alu 1 306 -4 272 348 87 29 chr2 179796955 179797093 -70890761 + L2 LINE L2 3127 3272 0 23 0 0 0 chr2 179797215 179797238 -70890616 + AT_rich Low_complexity Low_complexity 1 23 0 191 313 121 10 chr2 179798157 179798256 -70889598 - MIR3 SINE MIR -7 201 92 345 240 50 83 chr2 179798678 179798799 -70889055 + L2 LINE L2 3144 3260 -12 538 155 0 0 chr2 179798901 179798998 -70888856 - AluJ/FRAM SINE Alu -2 310 214 9653 198 20 8 chr2 179799139 179801956 -70885898 - L1PA15 LINE L1 0 6165 3302 1923 141 23 7 chr2 179801956 179802260 -70885594 - AluSx SINE Alu -3 309 1 9653 198 20 8 chr2 179802260 179802287 -70885567 - L1PA15 LINE L1 -2863 3302 3277 405 270 43 0 chr2 179802517 179802632 -70885222 - MIR SINE MIR -13 249 130 183 129 0 0 chr2 179802671 179802702 -70885152 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 427 295 107 0 chr2 179802702 179802824 -70885030 - MIR SINE MIR -115 147 13 180 0 0 0 chr2 179802924 179802944 -70884910 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 6086 66 11 0 chr2 179803417 179804207 -70883647 + L1PA8 LINE L1 5373 6171 -1 270 331 94 16 chr2 179804585 179804712 -70883142 - L2 LINE L2 -1 3312 3176 244 241 35 95 chr2 179806107 179806223 -70881631 - MIR SINE MIR -68 140 31 211 314 0 0 chr2 179806397 179806448 -70881406 + G-rich Low_complexity Low_complexity 1 51 0 292 353 201 8 chr2 179806867 179807484 -70880370 - L2 LINE L2 -1060 2254 1519 42933 30 24 1 chr2 179807835 179813851 -70874003 + L1HS LINE L1 1 6155 0 370 236 48 61 chr2 179813872 179814037 -70873817 + MER65A LTR ERV1 283 445 0 2490 64 0 0 chr2 179814372 179814669 -70873185 - AluY SINE Alu -13 298 2 221 241 89 0 chr2 179814767 179814846 -70873008 + L2 LINE L2 1942 2027 -1287 405 0 0 0 chr2 179815736 179815781 -70872073 + (CA)n Simple_repeat Simple_repeat 2 46 0 558 279 28 37 chr2 179815789 179816004 -70871850 + MIR SINE MIR 34 246 -16 1743 164 61 80 chr2 179816009 179816485 -70871369 - MLT1C LTR MaLR 0 467 1 1916 144 14 14 chr2 179817554 179817846 -70870008 + AluSx SINE Alu 1 292 -20 189 0 0 0 chr2 179818377 179818398 -70869456 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 382 281 76 48 chr2 179819384 179819594 -70868260 - MIR SINE MIR 0 262 47 269 282 146 5 chr2 179819629 179819740 -70868114 + MIR SINE MIR 8 122 -86 296 269 141 45 chr2 179820361 179820517 -70867337 + MIR3 SINE MIR 2 172 -36 408 222 111 91 chr2 179821225 179821311 -70866543 + MIR SINE MIR 51 134 -128 2341 87 0 3 chr2 179821311 179821610 -70866244 + AluSg SINE Alu 1 298 -12 408 222 111 91 chr2 179821610 179821721 -70866133 + MIR SINE MIR 134 252 -10 216 333 37 9 chr2 179822199 179822307 -70865547 + MIR SINE MIR 111 221 -41 22 56 0 0 chr2 179822518 179822554 -70865300 + AT_rich Low_complexity Low_complexity 1 36 0 960 199 18 0 chr2 179823254 179823425 -70864429 + MER45A DNA AcHobo 5 178 0 2255 109 7 0 chr2 179825222 179825524 -70862330 + AluSg SINE Alu 1 304 -6 1068 146 5 3 chr2 179825535 179825754 -70862100 + AluSg SINE Alu 7 281 -31 2117 117 0 24 chr2 179825805 179826103 -70861751 + AluSx SINE Alu 3 293 -19 2266 87 0 3 chr2 179826115 179826402 -70861452 + AluSg SINE Alu 1 286 -24 200 321 18 0 chr2 179828003 179828059 -70859795 + MIR SINE MIR 51 107 -155 31 0 0 0 chr2 179828075 179828106 -70859748 + AT_rich Low_complexity Low_complexity 1 31 0 301 230 0 46 chr2 179828576 179828663 -70859191 + MIR SINE MIR 121 203 -59 1938 146 17 0 chr2 179828698 179828992 -70858862 - AluSx SINE Alu -13 299 1 2378 106 0 0 chr2 179830706 179831018 -70856836 + AluSq SINE Alu 1 312 -1 359 171 13 0 chr2 179831218 179831294 -70856560 + (TA)n Simple_repeat Simple_repeat 2 78 0 211 136 68 0 chr2 179832297 179832341 -70855513 + (TTCTG)n Simple_repeat Simple_repeat 4 50 0 498 304 44 0 chr2 179835756 179835914 -70851940 + MIR SINE MIR 55 219 -43 324 0 0 0 chr2 179836037 179836073 -70851781 + (TG)n Simple_repeat Simple_repeat 2 37 0 3850 106 7 3 chr2 179836669 179837247 -70850607 - L1PA16 LINE L1 -1 6165 5586 242 247 12 25 chr2 179837599 179837680 -70850174 + L1ME4a LINE L1 5525 5604 -517 4352 148 24 36 chr2 179837691 179838514 -70849340 + L1MB7 LINE L1 5372 6184 0 367 169 39 0 chr2 179838551 179838628 -70849226 + MER116 DNA Mariner 1 80 0 435 254 88 3 chr2 179838701 179839021 -70848833 + L1ME4a LINE L1 5730 6117 -4 704 157 25 0 chr2 179840129 179840250 -70847604 + FLAM_C SINE Alu 1 124 -19 472 239 25 119 chr2 179840258 179840459 -70847395 + L2 LINE L2 3132 3313 0 2068 112 3 14 chr2 179842441 179842767 -70845087 - AluSg SINE Alu 0 323 1 290 182 91 127 chr2 179844305 179844415 -70843439 + L3 LINE CR1 1448 1553 -24 460 228 245 38 chr2 179844817 179845001 -70842853 - MIR SINE MIR -12 250 29 358 320 33 20 chr2 179845206 179845450 -70842404 + L1ME LINE L1 5528 5774 -347 1514 224 36 53 chr2 179845739 179846183 -70841671 - MER89 LTR ERV1 -24 535 1 545 207 41 8 chr2 179846223 179846344 -70841510 - MER21B LTR ERV1 -410 453 329 705 289 53 8 chr2 179846454 179846700 -70841154 - MIR SINE MIR -5 257 1 26 30 0 0 chr2 179847118 179847151 -70840703 + AT_rich Low_complexity Low_complexity 1 33 0 185 333 0 0 chr2 179847510 179847564 -70840290 + L3 LINE CR1 1429 1482 -95 297 331 22 43 chr2 179847789 179847928 -70839926 + L2 LINE L2 2962 3097 -175 1347 242 74 78 chr2 179849639 179850487 -70837367 + L1MC4 LINE L1 7040 7884 -158 211 218 0 26 chr2 179850487 179850565 -70837289 + GA-rich Low_complexity Low_complexity 1 76 0 1853 117 0 62 chr2 179850751 179851042 -70836812 - AluSx SINE Alu -39 273 1 488 341 63 9 chr2 179851401 179851720 -70836134 - L2 LINE L2 -213 3059 2719 290 298 105 41 chr2 179851713 179851884 -70835970 + L2 LINE L2 3126 3307 -6 * 321 361 40 0 chr2 179852003 179852205 -70835649 + L1ME3A LINE L1 5680 5889 -281 2215 100 13 3 chr2 179852438 179852737 -70835117 + AluSg SINE Alu 1 302 -8 1374 183 0 12 chr2 179853354 179853600 -70834254 - AluJo SINE Alu -69 243 1 25 65 0 0 chr2 179854201 179854247 -70833607 + AT_rich Low_complexity Low_complexity 1 46 0 438 323 104 12 chr2 179854359 179854610 -70833244 - L2 LINE L2 -649 2665 2392 2115 121 0 19 chr2 179855262 179855569 -70832285 + AluSx SINE Alu 1 301 -11 2156 122 3 10 chr2 179855652 179855677 -70832177 - AluSq SINE Alu -4 309 285 468 0 0 0 chr2 179855677 179855729 -70832125 + (TG)n Simple_repeat Simple_repeat 2 53 0 2156 122 3 10 chr2 179855729 179856014 -70831840 - AluSq SINE Alu -28 285 1 761 315 109 44 chr2 179856430 179857205 -70830649 - L2 LINE L2 -182 3090 2284 370 324 129 16 chr2 179857355 179857611 -70830243 + L3b LINE CR1 1134 1418 -165 303 289 106 14 chr2 179858714 179858856 -70828998 - MER5B DNA MER1_type -23 155 1 2211 113 0 0 chr2 179858898 179859189 -70828665 + AluSx SINE Alu 17 307 -5 2401 92 3 0 chr2 179861132 179861438 -70826416 + AluSx SINE Alu 1 307 -5 286 219 14 0 chr2 179861604 179861677 -70826177 + L1 LINE L1 4943 5016 -1130 502 258 31 12 chr2 179861815 179861978 -70825876 + L1ME LINE L1 5512 5677 -444 295 243 65 103 chr2 179863902 179864424 -70823430 + L1M4 LINE L1 2656 3157 -2989 1582 181 95 38 chr2 179864483 179864853 -70823001 + MSTD LTR MaLR 6 396 0 2492 268 52 56 chr2 179864946 179865348 -70822506 + L1M4 LINE L1 3283 3685 -2461 1582 188 0 15 chr2 179865348 179865619 -70822235 + AluJb SINE Alu 1 267 -45 2492 268 52 56 chr2 179865619 179867005 -70820849 + L1M4 LINE L1 3685 5064 -1082 1221 112 0 0 chr2 179867092 179867253 -70820601 + AluSg/x SINE Alu 135 295 -15 28197 108 11 11 chr2 179867294 179872802 -70815052 + L1PA8 LINE L1 662 6169 -3 638 191 32 13 chr2 179872863 179873020 -70814834 - L1MA10 LINE L1 -7 6327 6168 387 216 53 37 chr2 179873023 179873176 -70814678 - L1ME1 LINE L1 -165 6001 5865 250 200 118 18 chr2 179873269 179873379 -70814475 + L1PA14 LINE L1 5269 5389 -765 723 107 39 0 chr2 179873655 179873758 -70814096 + U6 snRNA snRNA 1 107 0 3142 89 54 54 chr2 179873758 179874295 -70813559 + L1PA14 LINE L1 5625 6161 0 937 212 82 0 chr2 179874359 179874408 -70813446 + L1ME3A LINE L1 5676 5720 -450 246 95 0 0 chr2 179874408 179874450 -70813404 + (TAAAA)n Simple_repeat Simple_repeat 2 43 0 937 212 82 0 chr2 179874450 179874655 -70813199 + L1ME3A LINE L1 5720 5951 -219 2146 126 31 0 chr2 179874815 179875109 -70812745 - AluSq SINE Alu -10 303 1 1820 153 3 3 chr2 179875677 179875993 -70811861 - AluJo SINE Alu 0 316 1 2345 88 7 0 chr2 179875999 179876293 -70811561 - AluSg SINE Alu -14 296 1 1885 187 7 0 chr2 179876951 179877256 -70810598 + AluJo SINE Alu 1 307 -5 504 340 22 5 chr2 179878477 179878662 -70809192 - MIR SINE MIR -69 193 6 351 169 0 25 chr2 179879097 179879215 -70808639 + (TA)n Simple_repeat Simple_repeat 1 115 0 203 321 94 9 chr2 179879391 179879497 -70808357 + MIR SINE MIR 98 212 -50 463 211 11 0 chr2 179880282 179880372 -70807482 + MIR SINE MIR 12 102 -160 809 291 40 16 chr2 179880704 179880951 -70806903 + MIR SINE MIR 10 262 0 249 33 0 0 chr2 179881259 179881289 -70806565 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2262 113 0 3 chr2 179881933 179882233 -70805621 + AluSx SINE Alu 1 299 -13 412 292 49 49 chr2 179882526 179882711 -70805143 - MIR3 SINE MIR -12 196 12 687 330 18 0 chr2 179882830 179883054 -70804800 - L2 LINE L2 -667 2647 2420 338 267 53 69 chr2 179883693 179883824 -70804030 + MIR SINE MIR 56 184 -78 430 316 26 0 chr2 179883961 179884113 -70803741 - L2 LINE L2 -733 2581 2426 39162 66 4 3 chr2 179884118 179890265 -70797589 + L1PA5 LINE L1 1 6154 0 203 211 19 0 chr2 179890391 179890443 -70797411 + (TTA)n Simple_repeat Simple_repeat 3 55 0 265 253 11 44 chr2 179891584 179891675 -70796179 + GA-rich Low_complexity Low_complexity 3 90 0 2212 114 0 0 chr2 179892613 179892910 -70794944 - AluSg SINE Alu -13 297 1 2355 119 28 19 chr2 179893016 179893377 -70794477 + THE1B LTR MaLR 1 364 0 440 256 40 91 chr2 179893390 179893566 -70794288 - L2 LINE L2 0 3272 3106 1348 223 146 81 chr2 179893694 179894277 -70793577 + MER45C DNA AcHobo 6 626 -327 250 236 36 0 chr2 179894277 179894332 -70793522 + MER45C DNA AcHobo 897 953 0 455 264 56 68 chr2 179894683 179895020 -70792834 + MLT1J1 LTR MaLR 66 411 -39 305 264 9 0 chr2 179895071 179895177 -70792677 - L1ME4a LINE L1 -46 6075 5969 388 304 159 19 chr2 179895201 179895408 -70792446 - MIR SINE MIR -14 248 13 331 289 47 0 chr2 179895505 179895633 -70792221 - L1ME4a LINE L1 -318 5803 5670 1655 128 0 4 chr2 179895687 179895913 -70791941 - AluSg/x SINE Alu -3 309 85 751 191 85 27 chr2 179895997 179896185 -70791669 + MER20 DNA MER1_type 16 214 -5 204 369 0 0 chr2 179896256 179896321 -70791533 - L2 LINE L2 -1 3271 3207 24 0 0 0 chr2 179897791 179897815 -70790039 + AT_rich Low_complexity Low_complexity 1 24 0 2023 231 53 15 chr2 179898089 179898617 -70789237 - MER74B LTR ERVL 0 622 75 210 209 52 63 chr2 179898831 179898961 -70788893 - MIR3 SINE MIR -82 180 5 665 249 69 5 chr2 179899177 179899366 -70788488 + MIR SINE MIR 62 262 0 831 189 0 0 chr2 179899432 179899564 -70788290 + FLAM_A SINE Alu 1 132 -1 28 61 0 0 chr2 179900686 179900735 -70787119 + AT_rich Low_complexity Low_complexity 1 49 0 1436 251 90 78 chr2 179901056 179901681 -70786173 + MER45C DNA AcHobo 1 632 -321 270 226 0 0 chr2 179901678 179901731 -70786123 + MER45C DNA AcHobo 900 952 -1 * 531 251 33 49 chr2 179903886 179904069 -70783785 - MIR SINE MIR -12 250 71 303 301 104 82 chr2 179907238 179907517 -70780337 + L1M2 LINE L1 467 751 -6098 201 265 41 0 chr2 179908016 179908065 -70779789 + L2 LINE L2 3215 3265 -7 235 298 106 11 chr2 179908243 179908337 -70779517 - L2 LINE L2 -669 2645 2543 337 189 0 0 chr2 179908352 179908405 -70779449 + L2 LINE L2 3209 3261 -11 688 288 26 0 chr2 179908513 179908704 -70779150 - MER63A DNA MER1_type -1 209 14 2071 155 46 19 chr2 179908712 179909145 -70778709 + L1MB8 LINE L1 5729 6173 -5 437 274 83 20 chr2 179909755 179909959 -70777895 - LTR33 LTR ERVL 0 521 305 2284 115 3 0 chr2 179910024 179910329 -70777525 + AluSx SINE Alu 1 306 -6 237 328 11 71 chr2 179911086 179911269 -70776585 - MIR3 SINE MIR -6 256 85 578 210 132 39 chr2 179911462 179911667 -70776187 - MLT1H1 LTR MaLR -37 518 295 449 141 26 0 chr2 179911999 179912077 -70775777 - AluJ/FRAM SINE Alu -1 311 232 1240 220 55 57 chr2 179912391 179912809 -70775045 + MLT1C LTR MaLR 51 467 0 6004 88 8 3 chr2 179913904 179915254 -70772600 - L1PA10 LINE L1 -16 6152 4790 21 36 0 0 chr2 179915426 179915454 -70772400 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 179916533 179916557 -70771297 + AT_rich Low_complexity Low_complexity 1 24 0 388 202 170 0 chr2 179916866 179916960 -70770894 + MIR SINE MIR 116 225 -37 259 191 0 0 chr2 179916997 179917044 -70770810 + MIR SINE MIR 213 259 -3 2403 150 84 4 chr2 179917158 179917774 -70770080 - MER72 LTR ERV1 0 722 1 2354 97 3 0 chr2 179917844 179918143 -70769711 - AluSx SINE Alu -12 300 1 483 270 63 56 chr2 179919634 179919904 -70767950 + MLT1I LTR MaLR 112 383 -26 923 138 153 0 chr2 179920103 179920292 -70767562 + L1PA16 LINE L1 5949 6166 0 467 266 32 41 chr2 179920924 179921165 -70766689 - MLT1H1 LTR MaLR -269 280 1 23 0 0 0 chr2 179921403 179921426 -70766428 + AT_rich Low_complexity Low_complexity 1 23 0 390 202 121 30 chr2 179921552 179921651 -70766203 + MIR SINE MIR 36 143 -65 2304 166 59 10 chr2 179921651 179921799 -70766055 + L1PB4 LINE L1 5625 5764 -392 2216 88 0 60 chr2 179921799 179922117 -70765737 + AluSg SINE Alu 1 299 -11 2304 166 59 10 chr2 179922117 179922473 -70765381 + L1PB4 LINE L1 5764 6154 -2 186 162 0 27 chr2 179922724 179922761 -70765093 - MIR3 SINE MIR -48 160 125 570 195 19 26 chr2 179923800 179923954 -70763900 - MLT2E LTR ERVL -1 627 475 1795 216 49 20 chr2 179923999 179924452 -70763402 - MER31B LTR ERV1 0 466 1 736 298 145 35 chr2 179924452 179924941 -70762913 - MLT2F LTR ERVL -118 545 1 1909 153 4 0 chr2 179925810 179926115 -70761739 - AluJb SINE Alu 0 306 1 199 180 0 60 chr2 179926243 179926293 -70761561 + MIR SINE MIR 157 203 -59 2289 87 7 7 chr2 179927341 179927639 -70760215 - AluSq SINE Alu -8 305 8 323 284 148 43 chr2 179928024 179928186 -70759668 - MIR3 SINE MIR -27 181 3 257 108 46 15 chr2 179928898 179928963 -70758891 + (CA)n Simple_repeat Simple_repeat 2 68 0 1808 158 0 10 chr2 179928992 179929289 -70758565 + AluJb SINE Alu 1 294 -18 1996 130 32 35 chr2 179929411 179929787 -70758067 - THE1C LTR MaLR 0 375 1 10022 108 33 39 chr2 179929787 179930899 -70756955 - THE1C-int LTR MaLR 0 1580 463 2341 85 0 31 chr2 179930899 179931218 -70756636 - AluY SINE Alu -2 309 1 10022 108 33 39 chr2 179931218 179931633 -70756221 - THE1C-int LTR MaLR -1117 463 61 2254 115 0 0 chr2 179931633 179931929 -70755925 - AluY SINE Alu -15 296 1 10022 108 33 39 chr2 179931929 179931990 -70755864 - THE1C-int LTR MaLR -1519 61 1 2112 122 32 35 chr2 179931990 179932366 -70755488 - THE1C LTR MaLR 0 375 1 536 303 101 59 chr2 179932529 179933274 -70754580 + HAL1b LINE L1 105 880 -468 2102 113 0 49 chr2 179933887 179934213 -70753641 + AluSx SINE Alu 1 310 -2 3931 129 59 29 chr2 179934244 179935005 -70752849 + L1MB3 LINE L1 5393 6176 -7 830 279 52 84 chr2 179935813 179936407 -70751447 - MER21B LTR ERV1 -191 672 98 353 256 14 22 chr2 179936382 179936519 -70751335 - MER21B LTR ERV1 -410 195 21 * 22 99 0 0 chr2 179936629 179936700 -70751154 + AT_rich Low_complexity Low_complexity 1 71 0 1767 166 0 53 chr2 179936705 179936874 -70750980 - AluJb SINE Alu -10 302 156 2248 116 0 0 chr2 179936874 179937168 -70750686 - AluSg SINE Alu -16 294 1 1767 166 0 53 chr2 179937168 179937317 -70750537 - AluJb SINE Alu -156 156 1 743 155 27 81 chr2 179937319 179937467 -70750387 - AluJo SINE Alu -172 140 1 901 195 27 92 chr2 179937508 179937770 -70750084 + MLT1C LTR MaLR 16 260 -207 1885 160 35 0 chr2 179937935 179938273 -70749581 + L1MB5 LINE L1 5817 6166 -8 29 28 0 0 chr2 179938273 179938309 -70749545 + AT_rich Low_complexity Low_complexity 1 36 0 204 40 0 0 chr2 179938497 179938522 -70749332 + (TAGA)n Simple_repeat Simple_repeat 1 25 0 2380 96 0 0 chr2 179939923 179940226 -70747628 + AluSg1 SINE Alu 1 303 -6 2442 97 7 0 chr2 179941421 179941731 -70746123 + AluSx SINE Alu 1 312 0 841 249 15 10 chr2 179942213 179942410 -70745444 - MIR SINE MIR 0 262 65 2445 94 0 0 chr2 179942454 179942762 -70745092 - AluSg SINE Alu -2 308 1 296 255 10 0 chr2 179943237 179943335 -70744519 + Charlie5 DNA MER1_type 22 120 -2492 535 182 8 8 chr2 179944164 179944285 -70743569 + L1MB8 LINE L1 6041 6161 -17 627 215 23 8 chr2 179944285 179944415 -70743439 + FLAM_A SINE Alu 2 133 0 376 287 37 19 chr2 179945208 179945316 -70742538 + L2 LINE L2 3201 3310 -3 350 224 67 67 chr2 179945375 179945509 -70742345 - MIR SINE MIR -66 196 63 354 286 12 0 chr2 179945585 179945669 -70742185 + L2 LINE L2 3175 3259 -13 2197 79 0 10 chr2 179945983 179946292 -70741562 - AluY SINE Alu 0 311 1 338 250 23 23 chr2 179946343 179946431 -70741423 + MIR3 SINE MIR 112 199 -9 1512 177 95 64 chr2 179946479 179946931 -70740923 + MER31B LTR ERV1 1 466 0 266 216 68 23 chr2 179948340 179948428 -70739426 + MIR SINE MIR 168 259 -3 686 198 99 12 chr2 179948824 179948986 -70738868 - MER58C DNA MER1_type 0 215 40 1682 158 37 27 chr2 179949328 179949626 -70738228 - AluJb SINE Alu -7 305 5 1709 143 37 53 chr2 179950615 179950915 -70736939 + AluJo SINE Alu 1 295 -17 378 275 66 49 chr2 179951307 179951490 -70736364 - MIR SINE MIR -6 202 20 24 0 0 0 chr2 179952120 179952144 -70735710 + AT_rich Low_complexity Low_complexity 1 24 0 807 266 115 0 chr2 179952310 179952536 -70735318 - MIR SINE MIR 0 262 11 221 345 154 0 chr2 179952537 179952647 -70735207 + MIR SINE MIR 22 148 -114 212 409 66 7 chr2 179953662 179953799 -70734055 - L2 LINE L2 -6 3266 3122 238 273 193 11 chr2 179953831 179953919 -70733935 + L2 LINE L2 3200 3303 -10 21 36 0 0 chr2 179956120 179956148 -70731706 + AT_rich Low_complexity Low_complexity 1 28 0 369 0 0 0 chr2 179956148 179956189 -70731665 + (CA)n Simple_repeat Simple_repeat 2 42 0 597 255 57 16 chr2 179956775 179956967 -70730887 + MIR SINE MIR 50 249 -13 1838 163 0 0 chr2 179959271 179959548 -70728306 + AluJb SINE Alu 1 277 -35 361 325 40 94 chr2 179959956 179960254 -70727600 - L2 LINE L2 -43 3229 2948 523 319 99 15 chr2 179960285 179960680 -70727174 - L2 LINE L2 -456 2858 2431 1920 108 57 0 chr2 179961683 179961962 -70725892 - AluY SINE Alu -16 295 1 1815 171 20 0 chr2 179962734 179963039 -70724815 - AluJb SINE Alu -1 311 1 683 217 29 6 chr2 179964467 179964642 -70723212 + MER104 DNA MER2_type 2 180 0 1563 173 20 27 chr2 179964975 179965270 -70722584 + AluJo SINE Alu 1 293 -19 704 161 16 0 chr2 179965702 179965826 -70722028 + FAM SINE Alu 1 126 -59 265 340 175 27 chr2 179965955 179966287 -70721567 - L3 LINE CR1 -7 1570 1190 29 47 0 0 chr2 179966777 179966820 -70721034 + AT_rich Low_complexity Low_complexity 1 43 0 2189 90 11 0 chr2 179967320 179967627 -70720227 - AluSp SINE Alu 0 310 1 240 254 0 30 chr2 179967633 179967700 -70720154 - MER5A DNA MER1_type -2 187 123 21 36 0 0 chr2 179968052 179968080 -70719774 + AT_rich Low_complexity Low_complexity 1 28 0 1838 115 12 68 chr2 179969448 179969770 -70718084 + AluSx SINE Alu 1 304 -8 195 277 43 0 chr2 179970471 179970525 -70717329 + MIR SINE MIR 102 156 -59 2391 82 0 0 chr2 179970767 179971070 -70716784 + AluY SINE Alu 1 303 -8 271 98 0 0 chr2 179971670 179971711 -70716143 + L1MC3 LINE L1 5320 5360 -804 200 108 0 27 chr2 179971743 179971780 -70716074 + (TTTTG)n Simple_repeat Simple_repeat 1 36 0 770 239 153 9 chr2 179971884 179972538 -70715316 + L1MC3 LINE L1 5391 6161 -9 185 128 64 11 chr2 179974082 179974176 -70713678 + (TA)n Simple_repeat Simple_repeat 1 99 0 24 32 0 0 chr2 179974736 179974767 -70713087 + AT_rich Low_complexity Low_complexity 1 31 0 325 297 89 46 chr2 179975156 179975526 -70712328 + L1M4 LINE L1 3426 3811 -2335 313 168 9 21 chr2 179975575 179975652 -70712202 - FLAM SINE Alu -6 127 75 634 253 124 25 chr2 179975904 179976106 -70711748 - MIR SINE MIR -34 228 7 2178 85 0 56 chr2 179976385 179976690 -70711164 + AluSx SINE Alu 2 289 -23 234 380 80 0 chr2 179976709 179976822 -70711032 + L2 LINE L2 3138 3259 -13 462 314 186 5 chr2 179977063 179977257 -70710597 - MIR SINE MIR 0 262 34 616 72 103 0 chr2 179977284 179977381 -70710473 + U5 snRNA snRNA 1 107 -9 1348 212 31 39 chr2 179978020 179978094 -70709760 - L1ME2 LINE L1 -27 6137 6064 1840 214 148 9 chr2 179978094 179978547 -70709307 + LTR40a LTR ERVL 3 518 -1 1348 212 31 39 chr2 179978547 179978707 -70709147 - L1ME2 LINE L1 -100 6064 5905 1711 166 20 53 chr2 179978707 179978809 -70709045 + MER2 DNA MER2_type 1 105 -239 1855 160 0 32 chr2 179978809 179979121 -70708733 + AluJb SINE Alu 1 302 -10 1711 166 20 53 chr2 179979121 179979373 -70708481 + MER2 DNA MER2_type 105 343 -1 1348 212 31 39 chr2 179979373 179979524 -70708330 - L1ME2 LINE L1 -259 5905 5754 930 276 70 71 chr2 179979542 179980159 -70707695 - L1ME LINE L1 -5454 616 1 308 257 68 14 chr2 179980164 179980312 -70707542 - L1MCa LINE L1 -3851 2575 2420 577 252 0 0 chr2 179980346 179980465 -70707389 - FLAM_A SINE Alu -14 119 1 2214 119 3 0 chr2 179980467 179980770 -70707084 - AluSq SINE Alu -9 304 1 408 274 50 81 chr2 179981282 179981543 -70706311 - L1MCa LINE L1 -861 1926 1461 394 312 85 24 chr2 179981575 179981870 -70705984 - L1MCa LINE L1 -4862 1554 1242 24 0 0 0 chr2 179981898 179981922 -70705932 + AT_rich Low_complexity Low_complexity 1 24 0 1030 172 0 0 chr2 179981929 179982092 -70705762 - FAM SINE Alu -12 163 1 2260 108 7 0 chr2 179982179 179982475 -70705379 + AluSx SINE Alu 1 298 -14 2267 113 3 3 chr2 179982841 179982973 -70704881 + AluSx SINE Alu 1 132 -180 2326 84 0 10 chr2 179982973 179983297 -70704557 + AluSp SINE Alu 1 313 0 2267 113 3 3 chr2 179983297 179983475 -70704379 + AluSx SINE Alu 131 311 -1 291 245 183 0 chr2 179983925 179984140 -70703714 - L2 LINE L2 -267 3046 2790 306 228 114 89 chr2 179984338 179984389 -70703465 - MLT1H LTR MaLR -392 157 109 2291 110 0 0 chr2 179984389 179984698 -70703156 - AluSg1 SINE Alu 0 309 1 306 228 114 89 chr2 179984698 179984769 -70703085 - MLT1H LTR MaLR -440 109 32 3379 96 22 12 chr2 179984776 179985266 -70702588 + L1PA10 LINE L1 5659 6153 -15 2471 72 0 0 chr2 179985597 179985901 -70701953 - AluY SINE Alu -7 304 1 207 0 0 0 chr2 179985985 179986008 -70701846 + (A)n Simple_repeat Simple_repeat 1 23 0 1713 180 0 3 chr2 179986296 179986604 -70701250 + AluJo SINE Alu 1 307 0 324 246 105 40 chr2 179986768 179986876 -70700978 - L1MC5 LINE L1 -50 7911 7811 1211 201 47 0 chr2 179986876 179987090 -70700764 + MER58A DNA MER1_type 1 224 0 324 246 105 40 chr2 179987090 179987229 -70700625 - L1MC5 LINE L1 -150 7811 7648 198 0 0 0 chr2 179987627 179987649 -70700205 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 29 0 0 0 chr2 179987724 179987753 -70700101 + AT_rich Low_complexity Low_complexity 1 29 0 188 298 18 0 chr2 179987775 179987832 -70700022 - MIR SINE MIR -54 208 151 1561 174 3 55 chr2 179988261 179988359 -70699495 + AluJo SINE Alu 1 102 -210 1949 148 48 28 chr2 179988359 179988716 -70699138 - THE1B LTR MaLR 0 364 1 11887 90 2 4 chr2 179988716 179990299 -70697555 - THE1B-int LTR MaLR 0 1580 1 2088 114 54 26 chr2 179990301 179990653 -70697201 - THE1B LTR MaLR -2 362 1 1561 174 3 55 chr2 179990653 179990861 -70696993 + AluJo SINE Alu 102 295 -17 1066 203 74 16 chr2 179990864 179991120 -70696734 + L1MC4 LINE L1 6815 7085 -957 2359 223 63 7 chr2 179991135 179991749 -70696105 + L1MC4 LINE L1 7254 7902 -140 1610 254 13 31 chr2 179992108 179992561 -70695293 + LTR16A LTR ERVL 1 445 -5 1450 165 41 106 chr2 179992956 179993343 -70694511 - MLT1A1 LTR MaLR -3 362 1 219 412 24 18 chr2 179993966 179994136 -70693718 - L3 LINE CR1 -1312 265 95 343 186 17 1 chr2 179994154 179994250 -70693604 + AluS SINE Alu 224 312 0 485 211 32 0 chr2 179994314 179994409 -70693445 - L1ME LINE L1 -541 5580 5483 3725 128 34 75 chr2 179994717 179995475 -70692379 - L1MB2 LINE L1 -2 6169 5443 394 317 79 48 chr2 179995495 179995785 -70692069 - MLT1K LTR MaLR -158 430 132 2312 119 0 0 chr2 179996547 179996858 -70690996 + AluSx SINE Alu 1 311 -1 1573 180 0 39 chr2 179997135 179997440 -70690414 + AluJo SINE Alu 1 293 -19 1292 20 13 0 chr2 179997444 179997597 -70690257 + L1PA3 LINE L1 6001 6155 0 326 229 31 52 chr2 179998134 179998230 -70689624 + L2 LINE L2 3174 3267 -5 218 236 0 14 chr2 179998252 179998324 -70689530 + GA-rich Low_complexity Low_complexity 3 73 0 1509 164 38 3 chr2 179998722 179999064 -70688790 - L1MB1 LINE L1 -1 6167 5764 955 166 0 94 chr2 179999069 179999138 -70688716 - MLT1A1 LTR MaLR -163 202 128 2505 118 33 31 chr2 179999138 179999562 -70688292 - MSTA LTR MaLR 0 428 4 955 166 0 94 chr2 179999562 179999715 -70688139 - MLT1A1 LTR MaLR -237 128 1 2140 110 13 0 chr2 179999925 180000224 -70687630 - AluSg SINE Alu -7 303 1 798 301 81 24 chr2 180000249 180000539 -70687315 + L1MC4a LINE L1 5443 5770 -2038 1775 199 55 15 chr2 180000539 180000937 -70686917 + MLT2D LTR ERVL 1 414 0 798 301 81 24 chr2 180000937 180001104 -70686750 + L1MC4a LINE L1 5770 5926 -1882 2431 55 7 0 chr2 180001317 180001608 -70686246 + AluY SINE Alu 1 293 -18 334 287 91 58 chr2 180003227 180003621 -70684233 - L1 LINE L1 -1826 4320 3914 217 49 0 49 chr2 180003835 180003876 -70683978 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1406 222 7 27 chr2 180003958 180004255 -70683599 + AluJo SINE Alu 1 291 -11 2516 58 0 10 chr2 180004333 180004644 -70683210 + AluY SINE Alu 1 308 -3 1094 75 0 0 chr2 180005105 180005238 -70682616 - AluSc SINE Alu -176 133 1 4067 241 97 16 chr2 180005239 180006653 -70681201 - L1 LINE L1 -2391 3819 2521 1943 132 3 3 chr2 180006653 180006941 -70680913 + AluSq SINE Alu 1 288 -25 4067 241 97 16 chr2 180006941 180007281 -70680573 - L1 LINE L1 -3689 2521 2210 1499 217 17 0 chr2 180007281 180007580 -70680274 - AluJo SINE Alu -8 304 1 4067 241 97 16 chr2 180007580 180007960 -70679894 - L1 LINE L1 -4000 2210 1430 2071 114 4 4 chr2 180007966 180008285 -70679569 - AluSx SINE Alu 0 319 1 1966 252 27 17 chr2 180008298 180009220 -70678634 - L1 LINE L1 -4760 1381 3 1952 174 0 3 chr2 180009318 180009629 -70678225 + AluJb SINE Alu 1 310 -2 2400 64 0 13 chr2 180010289 180010587 -70677267 + AluY SINE Alu 1 294 -17 211 211 0 0 chr2 180011097 180011135 -70676719 + CT-rich Low_complexity Low_complexity 3 40 0 1849 304 126 35 chr2 180011182 180012652 -70675202 - L2 LINE L2 -769 2545 943 1822 155 13 23 chr2 180012861 180013164 -70674690 + AluJb SINE Alu 1 300 -12 826 161 0 0 chr2 180013786 180013910 -70673944 + FLAM_C SINE Alu 3 126 -17 2478 83 0 3 chr2 180013946 180014260 -70673594 + AluSq SINE Alu 1 313 0 2033 113 18 0 chr2 180014580 180014855 -70672999 + AluSq SINE Alu 1 280 -33 189 0 0 0 chr2 180014856 180014877 -70672977 + (CA)n Simple_repeat Simple_repeat 2 22 0 2078 117 3 0 chr2 180015058 180015238 -70672616 - AluSq SINE Alu 0 312 129 5252 74 0 6 chr2 180015238 180015877 -70671977 - L1PA7 LINE L1 0 6154 5520 2078 117 3 0 chr2 180015877 180016007 -70671847 - AluSq SINE Alu -183 129 1 2218 121 3 3 chr2 180016040 180016353 -70671501 + AluSp SINE Alu 1 313 0 1162 152 14 28 chr2 180016382 180016593 -70671261 + MER3 DNA MER1_type 1 208 -1 1812 173 0 13 chr2 180016624 180016930 -70670924 - AluJb SINE Alu -10 302 1 2025 155 0 16 chr2 180018056 180018397 -70669457 + AluSx SINE Alu 1 336 0 419 295 81 13 chr2 180018646 180018795 -70669059 + MER115 DNA AcHobo 26 184 -509 823 280 53 34 chr2 180018801 180019065 -70668789 + MER115 DNA AcHobo 310 578 -115 2376 92 3 3 chr2 180019076 180019382 -70668472 - AluSq SINE Alu -7 306 1 5683 146 26 9 chr2 180019382 180020712 -70667142 + L1MA8 LINE L1 4323 5668 -623 716 197 8 0 chr2 180020713 180020840 -70667014 + FLAM_C SINE Alu 3 130 -13 3373 129 46 33 chr2 180020849 180021270 -70666584 + L1MA8 LINE L1 5653 6087 -204 2234 82 7 0 chr2 180021270 180021572 -70666282 + AluSx SINE Alu 5 308 0 3373 129 46 33 chr2 180021572 180021779 -70666075 + L1MA8 LINE L1 6087 6290 -1 222 261 139 43 chr2 180021780 180021895 -70665959 - L2 LINE L2 -9 3304 3179 312 320 76 30 chr2 180022062 180022259 -70665595 - MIR SINE MIR -6 256 51 180 0 0 0 chr2 180022814 180022834 -70665020 + (A)n Simple_repeat Simple_repeat 1 20 0 2017 116 7 0 chr2 180022857 180023132 -70664722 - AluSx SINE Alu -35 277 1 1291 269 66 48 chr2 180023191 180023992 -70663862 + L2 LINE L2 2493 3308 -5 1615 64 5 5 chr2 180024499 180024703 -70663151 - AluY SINE Alu -3 308 105 1092 53 8 0 chr2 180024718 180024849 -70663005 - AluY SINE Alu -179 132 1 213 121 0 0 chr2 180024903 180024936 -70662918 + (A)n Simple_repeat Simple_repeat 1 33 0 1578 229 84 118 chr2 180025414 180025485 -70662369 - MLT2E LTR ERVL -5 623 551 2235 128 0 3 chr2 180025485 180025797 -70662057 + AluSx SINE Alu 1 311 -1 1578 229 84 118 chr2 180025797 180026368 -70661486 - MLT2E LTR ERVL -77 551 3 187 246 53 18 chr2 180026983 180027040 -70660814 + L2 LINE L2 620 678 -2636 2062 102 12 58 chr2 180027440 180027765 -70660089 - AluSx SINE Alu -2 310 1 325 266 111 108 chr2 180028777 180029325 -70658529 - L1M2 LINE L1 -5648 1201 652 826 281 78 5 chr2 180031584 180031938 -70655916 - L1ME3A LINE L1 -291 5879 5544 1642 155 36 20 chr2 180032182 180032485 -70655369 - MER44D DNA MER2_type 0 609 32 1775 96 26 0 chr2 180033030 180033260 -70654594 - AluSg SINE Alu -14 296 61 542 143 26 0 chr2 180033266 180033383 -70654471 + AluSg/x SINE Alu 204 322 0 266 146 0 0 chr2 180033383 180033424 -70654430 - MIR SINE MIR -134 128 88 180 339 65 0 chr2 180034389 180034451 -70653403 + L2 LINE L2 3191 3256 -16 2120 138 0 0 chr2 180034972 180035276 -70652578 - AluSx SINE Alu -8 304 1 2274 82 3 0 chr2 180035513 180035818 -70652036 - AluY SINE Alu 0 306 1 207 69 0 0 chr2 180036094 180036123 -70651731 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 687 193 129 7 chr2 180036123 180036263 -70651591 - FAM SINE Alu -18 157 1 250 122 0 0 chr2 180036359 180036400 -70651454 - MIR SINE MIR -66 142 102 2028 246 83 32 chr2 180036758 180037266 -70650588 - L1MEc LINE L1 -4402 1994 1424 2222 117 10 0 chr2 180037266 180037574 -70650280 + AluSx SINE Alu 2 312 0 2028 246 83 32 chr2 180037574 180037912 -70649942 - L1MEc LINE L1 -4972 1424 1105 659 198 0 0 chr2 180037966 180038067 -70649787 - FLAM_A SINE Alu -41 101 1 3449 219 97 31 chr2 180038072 180038738 -70649116 - L1MEc LINE L1 -5275 1121 363 1971 142 10 3 chr2 180038738 180039048 -70648806 - AluSx SINE Alu 0 312 1 3449 219 97 31 chr2 180039048 180039400 -70648454 - L1MEc LINE L1 -6033 363 36 260 294 110 28 chr2 180039758 180039867 -70647987 - MIR SINE MIR -116 146 29 2263 96 0 0 chr2 180041327 180041639 -70646215 - AluSx SINE Alu 0 312 1 690 133 0 33 chr2 180041647 180041767 -70646087 - FLAM_C SINE Alu -1 142 27 663 205 39 79 chr2 180041879 180042258 -70645596 - MLT1D LTR MaLR 0 505 31 2293 106 3 6 chr2 180042727 180043038 -70644816 + AluSx SINE Alu 1 310 -2 238 188 29 14 chr2 180043278 180043347 -70644507 - HAL1 LINE L1 -717 1790 1721 528 116 0 0 chr2 180043354 180043440 -70644414 + (TCCCC)n Simple_repeat Simple_repeat 3 88 0 2325 224 119 68 chr2 180043457 180044583 -70643271 - HAL1 LINE L1 -710 1797 615 1921 117 21 18 chr2 180044728 180045044 -70642810 - AluSx SINE Alu 0 317 1 1830 144 3 20 chr2 180045253 180045545 -70642309 + AluSx SINE Alu 3 289 -23 270 0 0 0 chr2 180045545 180045575 -70642279 + (CA)n Simple_repeat Simple_repeat 2 31 0 1736 168 40 0 chr2 180045725 180046022 -70641832 + AluJo SINE Alu 1 309 -3 2094 110 10 3 chr2 180047538 180047830 -70640024 - AluSg SINE Alu -16 294 1 497 303 171 54 chr2 180047840 180048854 -70639000 + L2 LINE L2 2054 3216 -56 1284 174 88 101 chr2 180049078 180049389 -70638465 - MLT2C1 LTR ERVL -3 394 88 1731 137 20 40 chr2 180049389 180049689 -70638165 + AluJo SINE Alu 3 296 -16 1284 174 88 101 chr2 180049689 180049774 -70638080 - MLT2C1 LTR ERVL -309 88 3 207 114 0 0 chr2 180049822 180049857 -70637997 + (A)n Simple_repeat Simple_repeat 1 35 0 1341 244 99 26 chr2 180051089 180051997 -70635857 + L1MC4 LINE L1 6949 8040 -2 388 254 164 0 chr2 180052006 180052128 -70635726 + L1MC4 LINE L1 7569 7710 -332 3832 133 67 12 chr2 180052131 180052711 -70635143 - LTR9 LTR ERV1 0 612 1 311 244 37 0 chr2 180052728 180052810 -70635044 + L1MC4 LINE L1 7956 8040 -2 23 0 0 0 chr2 180053111 180053134 -70634720 + AT_rich Low_complexity Low_complexity 1 23 0 2195 127 0 0 chr2 180053341 180053648 -70634206 - AluSg SINE Alu -3 307 1 549 303 51 26 chr2 180053916 180054150 -70633704 - MIR SINE MIR -12 250 11 1672 170 0 31 chr2 180055037 180055326 -70632528 - AluJb SINE Alu -32 280 1 23 33 0 0 chr2 180055956 180055986 -70631868 + AT_rich Low_complexity Low_complexity 1 30 0 2355 66 7 13 chr2 180057083 180057388 -70630466 + AluY SINE Alu 1 303 -8 22 35 0 0 chr2 180057609 180057638 -70630216 + AT_rich Low_complexity Low_complexity 1 29 0 327 256 25 41 chr2 180057738 180057859 -70629995 - L1ME LINE L1 -370 5751 5633 1757 192 0 0 chr2 180059373 180059664 -70628190 + AluJb SINE Alu 1 291 -21 426 120 0 0 chr2 180059668 180059743 -70628111 + (TC)n Simple_repeat Simple_repeat 2 76 0 270 81 0 0 chr2 180059958 180059995 -70627859 + (GAAAA)n Simple_repeat Simple_repeat 4 40 0 443 298 26 48 chr2 180060249 180060282 -70627572 - LTR33 LTR ERVL -1 520 488 2391 131 28 17 chr2 180060282 180060642 -70627212 - THE1B LTR MaLR 0 364 1 443 298 26 48 chr2 180060642 180060836 -70627018 - LTR33 LTR ERVL -33 488 298 271 311 75 9 chr2 180060898 180061004 -70626850 - LTR33 LTR ERVL -321 200 88 256 233 100 11 chr2 180061073 180061163 -70626691 - LTR33 LTR ERVL -404 117 20 307 265 50 90 chr2 180061336 180061616 -70626238 + L1ME3A LINE L1 4885 5162 -984 394 184 97 44 chr2 180061641 180061755 -70626099 + L1MC5 LINE L1 7742 7861 -100 1176 291 67 36 chr2 180061782 180062456 -70625398 + L1ME3A LINE L1 5256 5950 -220 1808 146 48 22 chr2 180062948 180062969 -70624885 - Charlie5 DNA MER1_type -8 2616 2597 2363 90 0 0 chr2 180062969 180063269 -70624585 + AluY SINE Alu 1 300 -11 1808 146 48 22 chr2 180063269 180063618 -70624236 - Charlie5 DNA MER1_type -27 2597 2236 1513 213 55 25 chr2 180063626 180063993 -70623861 - MSTD LTR MaLR -4 392 15 598 206 8 0 chr2 180064044 180064170 -70623684 - MER3 DNA MER1_type -47 162 36 772 161 90 13 chr2 180064206 180064261 -70623593 + MER5A DNA MER1_type 22 71 -118 1678 199 0 16 chr2 180064261 180064577 -70623277 + AluJb SINE Alu 1 311 -1 772 161 90 13 chr2 180064577 180064676 -70623178 + MER5A DNA MER1_type 71 188 -1 384 279 79 55 chr2 180064701 180064991 -70622863 - MLT1J LTR MaLR -151 360 64 3373 168 11 49 chr2 180065668 180066304 -70621550 - LTR9 LTR ERV1 0 612 1 1337 170 32 12 chr2 180066352 180066532 -70621322 - AluJo SINE Alu -4 308 120 180 0 0 0 chr2 180066532 180066552 -70621302 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1337 170 32 12 chr2 180066552 180066618 -70621236 - AluJo SINE Alu -192 120 57 21 57 0 0 chr2 180066944 180066979 -70620875 + AT_rich Low_complexity Low_complexity 1 35 0 514 235 90 42 chr2 180067099 180067265 -70620589 + MIR SINE MIR 16 189 -73 188 139 83 0 chr2 180067308 180067344 -70620510 - MIR SINE MIR -101 161 123 333 323 127 13 chr2 180068434 180068592 -70619262 + MIR SINE MIR 86 261 -1 228 35 0 0 chr2 180069112 180069141 -70618713 + (GA)n Simple_repeat Simple_repeat 1 29 0 911 182 17 6 chr2 180069144 180069325 -70618529 - L1MD2 LINE L1 -2 6357 6175 648 167 0 0 chr2 180069326 180069440 -70618414 - L1M4 LINE L1 -914 5232 5119 298 301 63 42 chr2 180069455 180069598 -70618256 + MER5A DNA MER1_type 7 152 -37 201 195 0 0 chr2 180070065 180070106 -70617748 + T-rich Low_complexity Low_complexity 1 41 0 2347 110 0 0 chr2 180070108 180070418 -70617436 - AluY SINE Alu 0 311 2 367 102 34 0 chr2 180070648 180070707 -70617147 - L1PA16 LINE L1 -2 6164 6104 1218 183 29 0 chr2 180072317 180072525 -70615329 - MER20 DNA MER1_type -5 214 1 3500 164 37 3 chr2 180072950 180073518 -70614336 + MER44D DNA MER2_type 138 596 -9 402 161 216 31 chr2 180073818 180073980 -70613874 - Charlie7 DNA MER1_type 0 2612 2421 1215 168 209 4 chr2 180073997 180074241 -70613613 + AluJo SINE Alu 1 294 -18 459 0 0 0 chr2 180074290 180074341 -70613513 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2258 78 0 7 chr2 180074343 180074624 -70613230 - AluY SINE Alu -32 279 1 950 148 0 0 chr2 180074797 180074946 -70612908 + L1MB3 LINE L1 5962 6110 -73 1646 157 4 8 chr2 180074984 180075245 -70612609 + AluSx SINE Alu 3 262 -50 1215 110 0 0 chr2 180075299 180075462 -70612392 + AluSg/x SINE Alu 132 294 -18 1657 91 0 0 chr2 180075899 180076109 -70611745 - AluSg SINE Alu -100 210 1 2142 130 0 0 chr2 180076114 180076413 -70611441 - AluSx SINE Alu -13 299 1 1871 157 41 0 chr2 180076491 180076809 -70611045 + MER7A DNA MER2_type 4 332 -14 39 80 0 0 chr2 180077651 180077739 -70610115 + AT_rich Low_complexity Low_complexity 1 88 0 716 299 153 38 chr2 180078039 180078345 -70609509 + L2 LINE L2 2314 2583 -730 2347 92 3 0 chr2 180078345 180078648 -70609206 - AluSg SINE Alu -6 304 1 716 299 153 38 chr2 180078648 180079224 -70608630 + L2 LINE L2 2583 3309 -4 336 261 25 101 chr2 180080372 180080561 -70607293 - MIR SINE MIR -59 203 30 206 258 91 0 chr2 180081315 180081381 -70606473 + L2 LINE L2 2393 2464 -850 192 200 73 18 chr2 180081607 180081662 -70606192 + L2 LINE L2 3215 3272 0 215 319 14 0 chr2 180082792 180082864 -70604990 - MIR SINE MIR -69 139 67 411 279 111 50 chr2 180083503 180083620 -70604234 - L1ME4a LINE L1 -57 6064 5956 2046 133 0 16 chr2 180083620 180083937 -70603917 - AluSx SINE Alu 0 312 1 411 279 111 50 chr2 180083937 180084199 -70603655 - L1ME4a LINE L1 -165 5956 5662 237 286 0 0 chr2 180084623 180084679 -70603175 + L2 LINE L2 2284 2339 -975 238 194 81 16 chr2 180084736 180084798 -70603056 - MIR SINE MIR -85 177 112 396 322 230 19 chr2 180084861 180085491 -70602363 + L2 LINE L2 2346 3105 -167 1081 213 19 5 chr2 180086952 180087163 -70600691 - MER58A DNA MER1_type 0 224 11 2359 92 3 0 chr2 180087714 180088018 -70599836 - AluSq SINE Alu -8 305 1 534 186 168 36 chr2 180088437 180088472 -70599382 + MER53 DNA DNA 1 30 -159 2692 126 74 20 chr2 180088472 180088809 -70599045 + MSTC LTR MaLR 1 365 -63 2326 108 0 3 chr2 180088809 180089116 -70598738 + AluSg SINE Alu 1 306 -4 2692 126 74 20 chr2 180089116 180089184 -70598670 + MSTC LTR MaLR 365 428 0 534 186 168 36 chr2 180089184 180089315 -70598539 + MER53 DNA DNA 30 189 0 2624 84 18 63 chr2 180089546 180089721 -70598133 - THE1B LTR MaLR 0 364 183 2165 125 0 13 chr2 180089721 180090034 -70597820 + AluSx SINE Alu 3 311 -1 2624 84 18 63 chr2 180090034 180090239 -70597615 - THE1B LTR MaLR -181 183 1 25 0 0 0 chr2 180091672 180091697 -70596157 + AT_rich Low_complexity Low_complexity 1 25 0 318 324 18 9 chr2 180092370 180092481 -70595373 - MIR SINE MIR -110 152 41 1590 185 24 17 chr2 180092484 180092782 -70595072 - AluJo SINE Alu -6 306 7 2041 122 17 3 chr2 180092798 180093094 -70594760 - AluSx SINE Alu -12 300 1 295 299 34 0 chr2 180093126 180093243 -70594611 - L1MC5 LINE L1 -48 7913 7793 679 230 87 70 chr2 180093273 180093560 -70594294 - L1ME2 LINE L1 -1 6163 5872 1585 226 58 73 chr2 180094663 180095055 -70592799 - L1MC5 LINE L1 -734 7227 6840 498 75 0 0 chr2 180095055 180095122 -70592732 + (TATATG)n Simple_repeat Simple_repeat 6 72 0 1585 226 58 73 chr2 180095122 180095397 -70592457 - L1MC5 LINE L1 -1121 6840 6562 1983 105 56 0 chr2 180095561 180095876 -70591978 + AluSq SINE Alu 1 330 0 570 213 180 9 chr2 180095891 180096102 -70591752 + L1ME1 LINE L1 5919 6166 0 25 51 0 0 chr2 180097247 180097286 -70590568 + AT_rich Low_complexity Low_complexity 1 39 0 2078 132 3 0 chr2 180097894 180098183 -70589671 + AluSq SINE Alu 1 290 -23 448 275 56 45 chr2 180098186 180098364 -70589490 - MIR3 SINE MIR -13 195 16 303 28 0 0 chr2 180098504 180098540 -70589314 + (TG)n Simple_repeat Simple_repeat 2 37 0 1399 145 76 65 chr2 180099584 180099874 -70587980 - AluJo SINE Alu -14 298 6 217 268 0 28 chr2 180100111 180100182 -70587672 + CT-rich Low_complexity Low_complexity 1 69 0 2392 104 0 0 chr2 180101437 180101745 -70586109 + AluSx SINE Alu 1 308 -4 183 220 0 40 chr2 180102316 180102366 -70585488 + L2 LINE L2 3262 3309 -4 2347 106 3 0 chr2 180102444 180102745 -70585109 - AluSq SINE Alu -11 302 1 965 241 142 14 chr2 180102755 180103099 -70584755 - L1ME3 LINE L1 0 6162 5775 523 226 57 73 chr2 180103476 180103653 -70584201 - MER21B LTR ERV1 -363 500 327 977 187 87 35 chr2 180103658 180103888 -70583966 - L1ME3 LINE L1 -398 5764 5523 198 371 34 0 chr2 180104066 180104155 -70583699 + L2 LINE L2 3198 3289 -24 675 259 134 18 chr2 180104708 180104932 -70582922 - MIR SINE MIR 0 262 13 471 302 103 21 chr2 180105193 180105401 -70582453 - MIR SINE MIR -33 229 9 24 32 0 0 chr2 180106006 180106037 -70581817 + AT_rich Low_complexity Low_complexity 1 31 0 1792 146 39 0 chr2 180107672 180107952 -70579902 + AluJb SINE Alu 1 291 -21 679 260 66 6 chr2 180108798 180108979 -70578875 - MIR SINE MIR -55 207 16 257 351 18 18 chr2 180109365 180109479 -70578375 - L2 LINE L2 -565 2749 2636 338 315 92 58 chr2 180109505 180109594 -70578260 - L2 LINE L2 -865 2449 2365 2044 119 25 0 chr2 180109594 180109899 -70577955 + AluSq SINE Alu 2 313 0 338 315 92 58 chr2 180109899 180110100 -70577754 - L2 LINE L2 -949 2365 2148 685 210 117 0 chr2 180110172 180110334 -70577520 - MIR SINE MIR -10 252 72 2431 90 0 0 chr2 180110736 180111036 -70576818 - AluSx SINE Alu -12 300 1 792 228 114 10 chr2 180111273 180111475 -70576379 + MER58A DNA MER1_type 1 223 -1 2255 100 3 16 chr2 180114282 180114593 -70573261 + AluSc SINE Alu 1 307 -2 3382 108 20 22 chr2 180115107 180115375 -70572479 - L1P LINE L1 -775 5371 5104 2244 113 10 3 chr2 180115375 180115677 -70572177 - AluSx SINE Alu -8 304 1 3382 108 20 22 chr2 180115677 180116000 -70571854 - L1P LINE L1 -1042 5104 4781 2459 82 6 0 chr2 180116000 180116328 -70571526 + L1PA10 LINE L1 5826 6158 -10 232 309 55 82 chr2 180116353 180116573 -70571281 - L2 LINE L2 -91 3181 2968 2264 110 0 3 chr2 180117016 180117317 -70570537 - AluSq SINE Alu -13 300 1 2448 144 38 16 chr2 180117980 180118403 -70569451 - MSTB1 LTR MaLR 0 432 1 2237 115 3 0 chr2 180118636 180118941 -70568913 + AluSx SINE Alu 1 306 -6 405 121 11 88 chr2 180120514 180120605 -70567249 + Charlie8 DNA MER1_type 77 160 -2257 21 0 0 0 chr2 180120829 180120850 -70567004 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr2 180121514 180121538 -70566316 + (A)n Simple_repeat Simple_repeat 1 24 0 2427 75 0 13 chr2 180123006 180123314 -70564540 - AluSq SINE Alu -9 304 1 2284 120 0 0 chr2 180123372 180123680 -70564174 - AluSg SINE Alu -2 308 1 612 255 88 32 chr2 180123828 180124271 -70563583 - L1MC5 LINE L1 -202 7759 7292 682 219 62 39 chr2 180124428 180124684 -70563170 - L1MC5 LINE L1 -724 7237 6976 239 242 0 0 chr2 180124804 180124870 -70562984 - L1MC4 LINE L1 -1036 7006 6941 416 219 18 18 chr2 180124870 180124984 -70562870 - L1ME3A LINE L1 -26 6144 6031 748 269 74 10 chr2 180124997 180125392 -70562462 - L1MC4 LINE L1 -991 6817 6408 676 175 6 6 chr2 180126030 180126201 -70561653 + CT-rich Low_complexity Low_complexity 3 173 0 1204 86 11 17 chr2 180126312 180126487 -70561367 - L1PA13 LINE L1 -6 6157 5984 198 103 0 0 chr2 180126993 180127022 -70560832 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 279 207 195 85 chr2 180127023 180127187 -70560667 - L2 LINE L2 -14 3299 3118 446 204 0 19 chr2 180127446 180127549 -70560305 + L1MD3 LINE L1 7887 7987 -8 21 0 0 0 chr2 180127845 180127866 -70559988 + AT_rich Low_complexity Low_complexity 1 21 0 2014 90 39 0 chr2 180127868 180128179 -70559675 - L1MA2 LINE L1 -2 6302 5980 950 214 39 8 chr2 180128179 180128413 -70559441 + L1M4 LINE L1 4855 5095 -1051 255 200 0 0 chr2 180129018 180129063 -70558791 - Tigger5 DNA MER2_type -2268 55 11 741 144 23 40 chr2 180129118 180129291 -70558563 - L1MA8 LINE L1 -10 6281 6112 877 252 38 0 chr2 180129708 180129918 -70557936 + MER58A DNA MER1_type 1 218 -6 53 49 0 0 chr2 180130093 180130174 -70557680 + AT_rich Low_complexity Low_complexity 1 81 0 568 232 94 14 chr2 180130488 180130626 -70557228 - MER5A DNA MER1_type -36 153 5 583 212 8 45 chr2 180130670 180130802 -70557052 - MIR SINE MIR -94 168 42 551 246 148 6 chr2 180130877 180130915 -70556939 + MER63A DNA MER1_type 1 32 -1656 216 0 0 0 chr2 180130915 180130939 -70556915 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 551 246 148 6 chr2 180130939 180131083 -70556771 + MER63A DNA MER1_type 32 209 -1 844 138 0 36 chr2 180131680 180131818 -70556036 + FLAM_C SINE Alu 1 133 0 2814 161 34 63 chr2 180132206 180132784 -70555070 - L1MB3 LINE L1 -3 6180 5623 1524 133 160 11 chr2 180132784 180133047 -70554807 - AluSp SINE Alu -1 302 1 2814 161 34 63 chr2 180133047 180133146 -70554708 - L1MB3 LINE L1 -560 5623 5523 431 99 37 12 chr2 180133580 180133661 -70554193 - L1MC1 LINE L1 -454 5879 5797 279 94 0 47 chr2 180133866 180133930 -70553924 + (TTTC)n Simple_repeat Simple_repeat 1 61 0 285 208 0 0 chr2 180133930 180133978 -70553876 - MER66B LTR ERV1 -144 342 295 798 202 29 0 chr2 180134608 180134781 -70553073 - LTR32 LTR ERVL -277 194 17 1777 163 18 0 chr2 180134843 180135120 -70552734 - AluSx SINE Alu -30 282 1 332 313 159 18 chr2 180135280 180135619 -70552235 + L1MEc LINE L1 2136 2522 -3874 248 169 31 46 chr2 180135667 180135732 -70552122 + L1ME LINE L1 5723 5786 -376 528 275 149 0 chr2 180136055 180136277 -70551577 + MLT1I LTR MaLR 99 353 -56 231 192 135 0 chr2 180136300 180136352 -70551502 + MLT1A1 LTR MaLR 244 302 -63 274 243 135 0 chr2 180137957 180138031 -70549823 + L2 LINE L2 2238 2321 -993 1034 170 60 107 chr2 180138353 180138585 -70549269 - MLT1A1 LTR MaLR 0 365 156 2368 127 36 3 chr2 180138585 180138948 -70548906 - THE1C LTR MaLR 0 375 1 1034 170 60 107 chr2 180138948 180139098 -70548756 - MLT1A1 LTR MaLR -209 156 1 217 256 141 50 chr2 180139105 180139226 -70548628 + L2 LINE L2 2791 2922 -392 188 283 76 0 chr2 180142768 180142860 -70544994 + L2 LINE L2 2174 2272 -1042 180 289 90 72 chr2 180143050 180143216 -70544638 + L2 LINE L2 2451 2619 -695 491 318 38 14 chr2 180144451 180144662 -70543192 + MER102a DNA MER1_type 115 330 0 1590 279 117 43 chr2 180144719 180144776 -70543078 + L2 LINE L2 2304 2355 -958 2592 56 0 0 chr2 180144776 180145080 -70542774 - AluY SINE Alu -7 304 1 1590 279 117 43 chr2 180145080 180145972 -70541882 + L2 LINE L2 2355 3313 0 218 314 105 52 chr2 180145977 180146206 -70541648 - L2 LINE L2 -2646 668 428 21 0 0 0 chr2 180146310 180146331 -70541523 + AT_rich Low_complexity Low_complexity 1 21 0 1060 145 0 0 chr2 180146361 180146520 -70541334 - AluSg/x SINE Alu -28 284 126 2363 77 13 0 chr2 180146521 180146819 -70541035 - AluSq SINE Alu -9 304 3 2161 115 3 0 chr2 180146832 180147119 -70540735 - AluSq SINE Alu -25 288 1 2316 123 0 0 chr2 180147250 180147559 -70540295 - AluSq SINE Alu -4 309 1 253 152 0 136 chr2 180147597 180147663 -70540191 - MER5A DNA MER1_type -81 108 52 29 0 0 0 chr2 180147952 180147981 -70539873 + AT_rich Low_complexity Low_complexity 1 29 0 254 290 86 77 chr2 180149098 180149228 -70538626 - MIR SINE MIR -64 144 6 223 259 26 86 chr2 180150135 180150251 -70537603 - MER5A DNA MER1_type -75 114 6 900 269 47 19 chr2 180150513 180150873 -70536981 + L1ME4a LINE L1 5484 5853 -268 1329 138 0 0 chr2 180151039 180151249 -70536605 - MER2 DNA MER2_type -135 210 1 276 279 158 11 chr2 180151277 180151467 -70536387 + L1ME4a LINE L1 5879 6096 -25 25 51 0 0 chr2 180151554 180151593 -70536261 + AT_rich Low_complexity Low_complexity 1 39 0 387 0 0 0 chr2 180151801 180151844 -70536010 + (TA)n Simple_repeat Simple_repeat 1 43 0 185 200 25 0 chr2 180151852 180151892 -70535962 - L2 LINE L2 0 3272 3232 488 294 72 43 chr2 180153263 180153498 -70534356 - MIR SINE MIR -1 261 20 225 301 143 15 chr2 180153879 180154012 -70533842 + MIR SINE MIR 59 208 -54 2214 83 25 0 chr2 180155241 180155518 -70532336 + AluSc SINE Alu 1 284 -25 345 278 104 0 chr2 180156821 180156936 -70530918 + L2 LINE L2 3183 3309 -4 22 0 0 0 chr2 180157277 180157299 -70530555 + AT_rich Low_complexity Low_complexity 1 22 0 2108 138 3 0 chr2 180157821 180158126 -70529728 - AluSq SINE Alu -7 306 1 382 237 70 136 chr2 180158979 180159236 -70528618 - MIR SINE MIR 0 262 23 415 278 90 0 chr2 180159992 180160125 -70527729 - MIR SINE MIR -5 257 113 485 193 101 9 chr2 180160159 180160268 -70527586 - LTR16A1 LTR ERVL -335 122 4 1460 56 5 10 chr2 180161337 180161532 -70526322 + L1PB1 LINE L1 5958 6151 0 1904 169 0 0 chr2 180162861 180163151 -70524703 - AluSx SINE Alu -22 290 1 382 240 120 66 chr2 180163273 180163531 -70524323 - L1ME4a LINE L1 -214 5907 5636 2204 89 0 40 chr2 180163781 180164083 -70523771 - AluSg SINE Alu -15 295 6 1890 150 6 13 chr2 180167463 180167777 -70520077 + AluSx SINE Alu 1 312 0 337 302 37 13 chr2 180168241 180168363 -70519491 - MIR SINE MIR -61 147 20 1852 122 28 35 chr2 180168868 180169184 -70518670 - AluSx SINE Alu 0 314 1 25 0 0 0 chr2 180169457 180169482 -70518372 + AT_rich Low_complexity Low_complexity 1 25 0 44 56 0 0 chr2 180169530 180169602 -70518252 + AT_rich Low_complexity Low_complexity 1 72 0 27 49 0 0 chr2 180171602 180171643 -70516211 + AT_rich Low_complexity Low_complexity 1 41 0 192 195 73 0 chr2 180171999 180172040 -70515814 - MIR SINE MIR -97 165 122 2027 118 31 0 chr2 180172307 180172595 -70515259 - AluSx SINE Alu -15 297 1 250 234 0 0 chr2 180172774 180172821 -70515033 - MER5A DNA MER1_type -138 51 5 21 0 0 0 chr2 180173836 180173857 -70513997 + AT_rich Low_complexity Low_complexity 1 21 0 424 385 6 0 chr2 180174552 180174726 -70513128 + MIR3 SINE MIR 28 202 -6 209 222 22 0 chr2 180177361 180177406 -70510448 + (TATG)n Simple_repeat Simple_repeat 3 48 0 1002 172 0 0 chr2 180177603 180177766 -70510088 + FRAM SINE Alu 1 163 -3 562 208 71 35 chr2 180184109 180184485 -70503369 - MLT1H1 LTR MaLR -53 502 38 3329 175 33 17 chr2 180185315 180186013 -70501841 + L1 LINE L1 3854 4562 -1584 2327 114 6 6 chr2 180186013 180186368 -70501486 + L1PA14 LINE L1 5799 6158 -3 362 309 115 18 chr2 180187272 180187306 -70500548 + MIR3 SINE MIR 23 52 -156 309 203 27 0 chr2 180187306 180187380 -70500474 - MER116 DNA Mariner 0 80 5 362 309 115 18 chr2 180187380 180187510 -70500344 + MIR3 SINE MIR 52 203 -5 209 225 84 28 chr2 180194734 180194805 -70493049 + MER91B DNA MER1_type 63 137 -53 635 249 14 9 chr2 180199112 180199283 -70488571 + MER20B DNA MER1_type 28 202 -17 28 0 0 0 chr2 180205964 180205992 -70481862 + AT_rich Low_complexity Low_complexity 1 28 0 234 128 0 0 chr2 180206037 180206076 -70481778 + (CATA)n Simple_repeat Simple_repeat 2 40 0 230 290 10 60 chr2 180206538 180206638 -70481216 - L2 LINE L2 0 3272 3178 27 29 0 0 chr2 180207044 180207078 -70480776 + AT_rich Low_complexity Low_complexity 1 34 0 25 0 0 0 chr2 180207866 180207891 -70479963 + AT_rich Low_complexity Low_complexity 1 25 0 279 0 0 0 chr2 180209305 180209336 -70478518 + (TA)n Simple_repeat Simple_repeat 1 31 0 2310 111 0 3 chr2 180213455 180213761 -70474093 + AluSx SINE Alu 1 305 -7 1796 156 7 10 chr2 180214444 180214733 -70473121 - AluSx SINE Alu 0 312 25 227 354 69 28 chr2 180214817 180214961 -70472893 + MIR3 SINE MIR 49 198 -10 361 198 229 32 chr2 180223359 180223516 -70464338 + MER112 DNA MER1_type 1 188 -72 6637 50 8 4 chr2 180223521 180224298 -70463556 + L1PA7 LINE L1 5373 6152 -2 480 368 31 0 chr2 180226951 180227114 -70460740 - MIR3 SINE MIR -21 187 20 260 176 11 33 chr2 180250684 180250775 -70437079 + (TA)n Simple_repeat Simple_repeat 2 90 0 322 317 24 24 chr2 180253028 180253151 -70434703 + MIR3 SINE MIR 77 199 -9 2107 122 0 3 chr2 180253269 180253598 -70434256 - AluSx SINE Alu 0 312 1 225 255 234 0 chr2 180253697 180253791 -70434063 - MIR SINE MIR -119 143 28 29 0 0 0 chr2 180254433 180254462 -70433392 + AT_rich Low_complexity Low_complexity 1 29 0 33 56 0 0 chr2 180258356 180258410 -70429444 + AT_rich Low_complexity Low_complexity 1 54 0 22 56 0 0 chr2 180265035 180265071 -70422783 + AT_rich Low_complexity Low_complexity 1 36 0 250 161 0 32 chr2 180267731 180267793 -70420061 + GA-rich Low_complexity Low_complexity 4 63 0 413 54 32 14 chr2 180267879 180267959 -70419895 + L1PA16 LINE L1 6076 6155 -1 41 21 0 0 chr2 180267959 180268007 -70419847 + AT_rich Low_complexity Low_complexity 1 48 0 819 230 26 0 chr2 180268489 180268680 -70419174 - L1ME1 LINE L1 -5 6161 5966 2219 110 3 22 chr2 180268917 180269235 -70418619 - AluSx SINE Alu 0 312 1 7440 35 5 0 chr2 180283870 180284876 -70402978 + L1PA3 LINE L1 5143 6152 -3 990 206 82 21 chr2 180285629 180285910 -70401944 - LTR16A1 LTR ERVL -1 456 159 213 244 26 64 chr2 180286102 180286180 -70401674 + MIR3 SINE MIR 127 201 -7 651 313 55 5 chr2 180286851 180287052 -70400802 + MIR SINE MIR 52 262 0 1267 134 131 72 chr2 180287154 180287249 -70400605 - MER44D DNA MER2_type -1882 609 521 2509 62 10 0 chr2 180287249 180287557 -70400297 - AluY SINE Alu 0 311 1 1267 134 131 72 chr2 180287557 180287581 -70400273 - MER44D DNA MER2_type -1970 521 500 2149 128 22 30 chr2 180287581 180287947 -70399907 + THE1B LTR MaLR 1 363 -1 1267 134 131 72 chr2 180287947 180288146 -70399708 - MER44D DNA MER2_type -1991 500 1 * 1317 195 56 74 chr2 180288144 180288534 -70399320 - MLT1B LTR MaLR 0 390 8 251 167 202 0 chr2 180289072 180289156 -70398698 + MER103 DNA DNA 56 156 -10 219 349 62 8 chr2 180289584 180289713 -70398141 - L2 LINE L2 -508 2806 2671 193 286 0 0 chr2 180290107 180290149 -70397705 - L3b LINE CR1 -249 1334 1293 353 289 70 9 chr2 180291122 180291236 -70396618 - MIR3 SINE MIR -73 135 15 382 244 195 16 chr2 180292215 180292338 -70395516 - MER5A DNA MER1_type -1 188 44 513 199 15 151 chr2 180292519 180292679 -70395175 - MER5B DNA MER1_type 0 178 50 1789 160 0 48 chr2 180292679 180292992 -70394862 - AluJb SINE Alu -14 298 1 513 199 15 151 chr2 180292992 180293037 -70394817 - MER5B DNA MER1_type -128 50 1 326 132 0 44 chr2 180293649 180293717 -70394137 + (TA)n Simple_repeat Simple_repeat 1 65 0 2010 107 8 0 chr2 180296447 180296710 -70391144 + AluSg SINE Alu 28 292 -18 191 154 103 0 chr2 180297745 180297784 -70390070 + MIR SINE MIR 218 260 -2 674 129 0 0 chr2 180297928 180298029 -70389825 + AluS SINE Alu 1 101 -211 1928 152 14 3 chr2 180298075 180298372 -70389482 + AluSx SINE Alu 1 300 -12 638 221 132 59 chr2 180298993 180299282 -70388572 - MSTD LTR MaLR -43 353 44 1937 125 24 14 chr2 180299571 180299858 -70387996 + AluSx SINE Alu 1 290 -22 1816 180 0 3 chr2 180299978 180300267 -70387587 + AluJb SINE Alu 12 299 -13 496 184 48 0 chr2 180300305 180300408 -70387446 - MIR SINE MIR -2 260 153 2437 258 168 46 chr2 180300502 180301656 -70386198 + HAL1 LINE L1 1 1013 -1494 351 0 0 0 chr2 180301656 180301695 -70386159 + (CA)n Simple_repeat Simple_repeat 1 39 0 2437 258 168 46 chr2 180301695 180302773 -70385081 + HAL1 LINE L1 1013 2506 -1 23 0 0 0 chr2 180304166 180304189 -70383665 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 180304455 180304478 -70383376 + AT_rich Low_complexity Low_complexity 1 23 0 321 206 206 11 chr2 180306204 180306296 -70381558 + L2 LINE L2 3200 3309 -4 300 307 44 26 chr2 180306339 180306455 -70381399 - MIR SINE MIR -59 149 42 273 119 0 0 chr2 180306911 180306953 -70380901 + (TG)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr2 180309289 180309310 -70378544 + AT_rich Low_complexity Low_complexity 1 21 0 2010 175 18 0 chr2 180309881 180310223 -70377631 - MER7A DNA MER2_type 0 346 1 27 87 0 0 chr2 180311736 180311805 -70376049 + AT_rich Low_complexity Low_complexity 1 69 0 2389 85 0 0 chr2 180312216 180312509 -70375345 + AluY SINE Alu 1 293 -18 202 130 19 19 chr2 180312509 180312563 -70375291 + (TA)n Simple_repeat Simple_repeat 1 54 0 324 203 0 13 chr2 180312567 180312646 -70375208 - MER103 DNA DNA -1 165 88 842 171 0 0 chr2 180312660 180312789 -70375065 + FLAM_C SINE Alu 1 129 -4 1159 146 80 42 chr2 180312801 180313041 -70374813 + AluJo SINE Alu 63 310 0 247 185 25 62 chr2 180314626 180314707 -70373147 + MLT1L LTR MaLR 2 79 -536 180 0 0 0 chr2 180314819 180314839 -70373015 + (A)n Simple_repeat Simple_repeat 1 20 0 405 255 58 16 chr2 180314956 180315100 -70372754 + MLT1L LTR MaLR 280 484 -98 338 280 42 85 chr2 180316194 180316430 -70371424 - L1M4 LINE L1 -786 5360 5135 1566 157 13 17 chr2 180316809 180317108 -70370746 - L1MB3 LINE L1 -7 6176 5879 1408 30 0 0 chr2 180317110 180317276 -70370578 - L1PA3 LINE L1 0 6155 5990 788 174 90 0 chr2 180317276 180317443 -70370411 - L1MB3 LINE L1 -291 5892 5711 234 220 34 0 chr2 180317477 180317536 -70370318 - L3b LINE CR1 -308 1275 1215 389 256 33 25 chr2 180317580 180317660 -70370194 - L1ME4a LINE L1 -7 6114 6031 1349 173 193 33 chr2 180317660 180318054 -70369800 + MSTB2 LTR MaLR 1 457 0 389 256 33 25 chr2 180318054 180318094 -70369760 - L1ME4a LINE L1 -90 6031 5993 2502 84 0 0 chr2 180318435 180318743 -70369111 + AluSx SINE Alu 1 308 -4 283 147 162 0 chr2 180318790 180318858 -70368996 - L1MB3 LINE L1 -412 5709 5631 196 347 132 28 chr2 180319739 180319883 -70367971 - L2 LINE L2 -2 3270 3112 936 107 25 44 chr2 180320138 180320297 -70367557 + FRAM SINE Alu 18 173 -3 415 229 55 0 chr2 180320689 180320798 -70367056 - MARNA DNA Mariner -11 575 461 1787 240 131 48 chr2 180320822 180321155 -70366699 + L1ME3A LINE L1 4431 4735 -1435 219 36 0 0 chr2 180321155 180321183 -70366671 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1787 240 131 48 chr2 180321183 180321620 -70366234 + L1ME3A LINE L1 4735 5134 -1036 788 165 0 8 chr2 180321620 180321753 -70366101 - FLAM_C SINE Alu 0 133 2 1787 240 131 48 chr2 180321753 180322002 -70365852 + L1ME3A LINE L1 5134 5361 -809 2028 158 0 16 chr2 180322002 180322319 -70365535 + AluJb SINE Alu 1 312 0 1787 240 131 48 chr2 180322319 180322332 -70365522 + L1ME3A LINE L1 5361 5372 -798 2125 130 57 80 chr2 180322332 180322808 -70365046 + MER31B LTR ERV1 2 466 0 1787 240 131 48 chr2 180322808 180323204 -70364650 + L1ME3A LINE L1 5372 5993 -177 301 331 6 71 chr2 180324479 180324648 -70363206 + MIR3 SINE MIR 41 198 -10 410 287 40 0 chr2 180325473 180325574 -70362280 + L2 LINE L2 3190 3294 -19 186 103 0 0 chr2 180325586 180325615 -70362239 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1853 183 7 0 chr2 180325653 180325948 -70361906 - AluJb SINE Alu -14 298 2 22 56 0 0 chr2 180326381 180326417 -70361437 + AT_rich Low_complexity Low_complexity 1 36 0 1945 161 0 3 chr2 180326476 180326767 -70361087 - AluSx SINE Alu -19 293 4 1335 160 36 88 chr2 180327174 180327480 -70360374 - AluJo SINE Alu -11 301 12 308 281 144 43 chr2 180327959 180328098 -70359756 - MIR3 SINE MIR -11 197 45 22 0 0 0 chr2 180328903 180328925 -70358929 + GC_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 180328959 180328988 -70358866 + GC_rich Low_complexity Low_complexity 1 29 0 42 86 0 0 chr2 180332061 180332166 -70355688 + AT_rich Low_complexity Low_complexity 1 105 0 2880 144 20 33 chr2 180332740 180332904 -70354950 + L1MB2 LINE L1 5634 5799 -372 726 124 91 0 chr2 180332904 180333025 -70354829 + FLAM_C SINE Alu 2 133 0 2880 144 20 33 chr2 180333025 180333403 -70354451 + L1MB2 LINE L1 5799 6169 -2 716 269 161 40 chr2 180333980 180334218 -70353636 + L1MC4a LINE L1 5319 5527 -2281 2361 93 0 0 chr2 180334218 180334508 -70353346 + AluSx SINE Alu 3 292 -20 716 269 161 40 chr2 180334508 180334741 -70353113 + L1MC4a LINE L1 5527 5847 -1961 1796 174 0 3 chr2 180334757 180335050 -70352804 + AluJb SINE Alu 1 292 -20 457 191 55 18 chr2 180335078 180335188 -70352666 - L2 LINE L2 -17 3296 3183 21 36 0 0 chr2 180335358 180335386 -70352468 + AT_rich Low_complexity Low_complexity 1 28 0 253 162 70 8 chr2 180336357 180336414 -70351440 - MIR SINE MIR -55 153 102 25 51 0 0 chr2 180336805 180336844 -70351010 + AT_rich Low_complexity Low_complexity 1 39 0 1788 83 8 30 chr2 180336874 180337138 -70350716 - AluSx SINE Alu -10 302 45 711 118 0 10 chr2 180337162 180337264 -70350590 + AluSg/x SINE Alu 192 292 -20 2178 135 3 0 chr2 180337371 180337682 -70350172 + AluSx SINE Alu 1 312 0 281 326 32 11 chr2 180338055 180338150 -70349704 - L2 LINE L2 -2 3270 3174 2170 110 0 13 chr2 180338233 180338534 -70349320 + AluSx SINE Alu 1 297 -15 1938 133 44 0 chr2 180338581 180338874 -70348980 + AluSx SINE Alu 1 306 -6 894 134 0 15 chr2 180338945 180339079 -70348775 - FLAM_C SINE Alu -1 132 1 1940 168 6 3 chr2 180339289 180339628 -70348226 + MER2 DNA MER2_type 1 340 -5 192 125 0 0 chr2 180339756 180339788 -70348066 + (A)n Simple_repeat Simple_repeat 1 32 0 2010 130 3 13 chr2 180340576 180340876 -70346978 + AluJo SINE Alu 1 297 -15 561 267 117 33 chr2 180340879 180341106 -70346748 - MIR SINE MIR 0 262 13 1384 167 119 15 chr2 180341106 180341375 -70346479 - AluJo SINE Alu -5 297 1 561 267 117 33 chr2 180341375 180341387 -70346467 - MIR SINE MIR -249 13 3 494 231 52 15 chr2 180342154 180342288 -70345566 - MIR SINE MIR -71 191 53 206 0 0 65 chr2 180342299 180342330 -70345524 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1174 176 81 10 chr2 180342941 180343237 -70344617 - MER33 DNA MER1_type -1 323 7 1612 132 90 63 chr2 180345064 180345429 -70342425 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr2 180346045 180346068 -70341786 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 180346181 180346201 -70341653 + (T)n Simple_repeat Simple_repeat 1 20 0 2213 59 34 31 chr2 180346201 180346521 -70341333 - LTR17 LTR ERV1 -454 326 6 1815 91 0 0 chr2 180346522 180346774 -70341080 - HERV17 LTR ERV1 0 8626 8375 3828 60 8 19 chr2 180346804 180347335 -70340519 - LTR17 LTR ERV1 0 780 256 26 50 0 0 chr2 180347346 180347386 -70340468 + AT_rich Low_complexity Low_complexity 1 40 0 2278 104 0 3 chr2 180347863 180348161 -70339693 + AluSg1 SINE Alu 1 297 -12 263 279 12 35 chr2 180348269 180348355 -70339499 - MIR SINE MIR -75 187 104 1709 189 7 26 chr2 180348873 180349180 -70338674 - AluJb SINE Alu -6 306 6 483 205 207 3 chr2 180349780 180349963 -70337891 - L1ME4a LINE L1 -281 5840 5627 23 0 0 0 chr2 180349967 180349990 -70337864 + AT_rich Low_complexity Low_complexity 1 23 0 1367 72 4 148 chr2 180350075 180350353 -70337501 + L1MA2 LINE L1 6067 6304 0 609 136 0 0 chr2 180351876 180351964 -70335890 - FRAM SINE Alu -19 157 70 1150 206 0 0 chr2 180352218 180352412 -70335442 - AluJo SINE Alu -118 194 1 1824 63 141 0 chr2 180352514 180352769 -70335085 + AluY SINE Alu 1 291 -10 2063 150 0 3 chr2 180352956 180353262 -70334592 - AluSx SINE Alu -7 305 1 2536 59 0 0 chr2 180357431 180357735 -70330119 - AluSx SINE Alu -8 304 1 21 0 0 0 chr2 180358980 180359001 -70328853 + GC_rich Low_complexity Low_complexity 1 21 0 320 299 195 6 chr2 180359089 180359253 -70328601 + L1M2 LINE L1 788 982 -5867 206 175 35 35 chr2 180360057 180360114 -70327740 - MIR SINE MIR -111 151 95 619 309 76 49 chr2 180360618 180361107 -70326747 + L2 LINE L2 2154 2655 -659 661 108 0 0 chr2 180361141 180361224 -70326630 - AluSg/x SINE Alu -17 293 211 21 36 0 0 chr2 180361924 180361952 -70325902 + AT_rich Low_complexity Low_complexity 1 28 0 2587 11 0 0 chr2 180362728 180363007 -70324847 - AluYa5 SINE Alu -5 306 28 2072 110 39 0 chr2 180363431 180363712 -70324142 + AluSq SINE Alu 1 292 -21 2208 107 3 3 chr2 180363715 180364014 -70323840 + AluSx SINE Alu 1 299 -13 338 312 32 24 chr2 180365038 180365163 -70322691 - L2 LINE L2 -221 3051 2926 444 348 61 11 chr2 180367112 180367293 -70320561 + MIR3 SINE MIR 3 192 -16 2017 130 10 3 chr2 180367561 180367861 -70319993 + AluSx SINE Alu 1 302 -10 824 344 114 20 chr2 180368445 180369341 -70318513 - L2 LINE L2 0 3272 2234 21 71 0 0 chr2 180369502 180369544 -70318310 + AT_rich Low_complexity Low_complexity 1 42 0 629 311 166 29 chr2 180369596 180370315 -70317539 + L1MC4a LINE L1 3522 4338 -1808 421 253 63 40 chr2 180370310 180370484 -70317370 + HAL1 LINE L1 2324 2501 -6 * 2256 76 0 20 chr2 180370763 180371064 -70316790 + AluY SINE Alu 1 295 -16 349 298 99 48 chr2 180371073 180371385 -70316469 + L1MC4a LINE L1 4612 4939 -1207 259 294 0 12 chr2 180371441 180371526 -70316328 + L1P LINE L1 4962 5045 -1101 628 238 32 0 chr2 180371744 180371870 -70315984 + FLAM_A SINE Alu 1 130 -3 772 262 185 23 chr2 180371911 180372316 -70315538 + L1MC4a LINE L1 5355 5786 -335 206 355 0 0 chr2 180372776 180372852 -70315002 + A-rich Low_complexity Low_complexity 4 79 0 794 236 46 0 chr2 180373843 180374017 -70313837 - MIR SINE MIR -26 236 55 2197 127 0 3 chr2 180374338 180374512 -70313342 - AluSq SINE Alu -6 307 133 1882 130 0 0 chr2 180374512 180374774 -70313080 - AluSg SINE Alu -13 297 36 2197 127 0 3 chr2 180374774 180374907 -70312947 - AluSq SINE Alu -180 133 1 964 175 6 6 chr2 180375155 180375326 -70312528 + AluJb SINE Alu 129 299 -13 2388 93 0 0 chr2 180375335 180375635 -70312219 + AluSx SINE Alu 1 300 -12 2404 168 46 48 chr2 180375928 180375958 -70311896 + L1MB5 LINE L1 5340 5369 -805 791 135 7 64 chr2 180375958 180376099 -70311755 + FLAM_C SINE Alu 1 133 0 2404 168 46 48 chr2 180376099 180376591 -70311263 + L1MB5 LINE L1 5369 5861 -313 210 311 57 62 chr2 180377139 180377316 -70310538 - MER5B DNA MER1_type -1 177 2 1908 146 30 0 chr2 180378433 180378735 -70309119 + AluJo SINE Alu 1 311 -1 208 214 107 0 chr2 180379823 180379879 -70307975 - L2 LINE L2 -8 3305 3244 852 273 185 9 chr2 180379971 180380290 -70307564 + LTR16A LTR ERVL 50 424 -26 1926 288 68 36 chr2 180380296 180380599 -70307255 + HERV16 LTR ERVL 2 294 -4702 1656 171 69 0 chr2 180380599 180380874 -70306980 + AluJo SINE Alu 1 294 -18 1926 288 68 36 chr2 180380874 180380911 -70306943 + HERV16 LTR ERVL 294 328 -4668 1210 204 22 76 chr2 180380911 180381225 -70306629 + AluJo SINE Alu 1 297 -15 1926 288 68 36 chr2 180381225 180381633 -70306221 + HERV16 LTR ERVL 328 775 -4221 1938 147 3 0 chr2 180381650 180381969 -70305885 + AluSx SINE Alu 1 312 0 2492 240 114 21 chr2 180381970 180382696 -70305158 + HERV16 LTR ERVL 1718 2511 -2485 7738 181 38 13 chr2 180382697 180385507 -70302347 + L1M3f LINE L1 3 2881 -3447 2023 100 0 0 chr2 180385507 180385758 -70302096 - AluSp SINE Alu -62 251 1 7738 181 38 13 chr2 180385758 180385844 -70302010 + L1M3f LINE L1 2881 2963 -3365 1852 311 56 13 chr2 180385844 180386698 -70301156 + HERV16 LTR ERVL 2501 3402 -1905 757 321 77 25 chr2 180386720 180387601 -70300253 + HERV16 LTR ERVL 3216 4498 -1266 579 332 5 5 chr2 180387781 180387971 -70299883 + HERV16 LTR ERVL 4705 4894 -760 1070 260 77 0 chr2 180388344 180388644 -70299210 + LTR16A LTR ERVL 123 445 -5 396 210 60 0 chr2 180388738 180388838 -70299016 + U5 snRNA snRNA 1 106 -10 2452 118 33 92 chr2 180388854 180389313 -70298541 + MSTB1 LTR MaLR 1 432 0 636 230 20 34 chr2 180390830 180390978 -70296876 + MIR SINE MIR 4 149 -113 261 282 36 36 chr2 180390980 180391090 -70296764 + L1ME LINE L1 138 247 -5958 2768 132 18 41 chr2 180391094 180391120 -70296734 - MER31A LTR ERV1 0 485 460 1776 151 6 42 chr2 180391120 180391431 -70296423 + AluJo SINE Alu 1 300 -12 2768 132 18 41 chr2 180391431 180391895 -70295959 - MER31A LTR ERV1 -25 460 6 288 329 7 22 chr2 180391917 180392153 -70295701 + L1ME LINE L1 171 443 -5953 363 281 27 30 chr2 180392281 180392506 -70295348 - L1ME LINE L1 -5397 808 644 509 214 122 15 chr2 180392562 180392693 -70295161 - MLT1H LTR MaLR -404 145 1 1432 222 28 83 chr2 180392696 180393092 -70294762 - MER69 DNA AcHobo -1996 530 157 1041 179 128 20 chr2 180393205 180393456 -70294398 - MER76 LTR ERV -181 507 230 387 227 50 34 chr2 180393518 180393637 -70294217 + MIR SINE MIR 96 216 -46 994 138 96 46 chr2 180393919 180394159 -70293695 - Charlie5 DNA MER1_type -27 2585 2334 1422 127 131 9 chr2 180394159 180394388 -70293466 - AluSg SINE Alu -10 300 44 1763 91 4 35 chr2 180396250 180396504 -70291350 + AluSp SINE Alu 1 246 -67 220 259 69 0 chr2 180396789 180396847 -70291007 - MIR3 SINE MIR -8 200 139 2324 101 0 0 chr2 180396866 180397172 -70290682 + AluSx SINE Alu 1 306 -6 4831 162 32 45 chr2 180397771 180398004 -70289850 - L1MB2 LINE L1 -3 6168 5934 2258 107 0 7 chr2 180398004 180398304 -70289550 + AluSg SINE Alu 1 298 -12 4831 162 32 45 chr2 180398304 180398780 -70289074 - L1MB2 LINE L1 -237 5934 5660 1829 148 133 12 chr2 180398780 180399125 -70288729 + MLT1B LTR MaLR 1 387 -3 4831 162 32 45 chr2 180399125 180399512 -70288342 - L1MB2 LINE L1 -511 5660 5270 249 214 107 0 chr2 180399613 180399669 -70288185 + MER94 DNA DNA 1 62 -72 32 0 0 0 chr2 180399675 180399707 -70288147 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr2 180399768 180399796 -70288058 + AT_rich Low_complexity Low_complexity 1 28 0 2384 196 67 24 chr2 180400077 180400694 -70287160 + MER114 LTR ERV 6 648 0 364 33 83 33 chr2 180401008 180401128 -70286726 + (TA)n Simple_repeat Simple_repeat 1 126 0 1717 128 0 4 chr2 180401632 180401923 -70285931 + AluSx SINE Alu 37 326 0 1741 202 32 21 chr2 180402045 180402117 -70285737 + MER89 LTR ERV1 3 73 -486 1725 98 0 17 chr2 180402117 180402351 -70285503 + MER30 DNA MER1_type 1 230 0 1741 202 32 21 chr2 180402351 180402728 -70285126 + MER89 LTR ERV1 73 556 -3 934 89 82 0 chr2 180402817 180402952 -70284902 - AluSp/q SINE Alu 0 313 168 2210 101 3 10 chr2 180403053 180403351 -70284503 + AluSx SINE Alu 1 296 -16 1812 178 0 0 chr2 180403908 180404201 -70283653 - AluJb SINE Alu -14 298 6 349 267 19 0 chr2 180404205 180404310 -70283544 + L1MC4 LINE L1 6931 7037 -1005 1862 92 11 23 chr2 180404318 180404578 -70283276 + AluSx SINE Alu 29 285 -27 21 36 0 0 chr2 180406288 180406316 -70281538 + AT_rich Low_complexity Low_complexity 1 28 0 2102 109 11 0 chr2 180406319 180406604 -70281250 - AluSx SINE Alu -24 288 1 979 133 17 39 chr2 180407605 180407786 -70280068 - FRAM SINE Alu 0 176 1 365 283 58 54 chr2 180407902 180408049 -70279805 + MER5A DNA MER1_type 4 161 -28 218 356 30 23 chr2 180407937 180408069 -70279785 - MER5A DNA MER1_type -39 150 18 * 24 0 0 0 chr2 180408734 180408758 -70279096 + AT_rich Low_complexity Low_complexity 1 24 0 579 274 102 2 chr2 180408928 180409151 -70278703 + L1ME1 LINE L1 5936 6177 -1 2105 97 7 20 chr2 180409161 180409461 -70278393 + AluSx SINE Alu 3 298 -14 252 0 0 0 chr2 180413945 180413973 -70273881 + (T)n Simple_repeat Simple_repeat 1 28 0 595 80 0 0 chr2 180415550 180415625 -70272229 - AluSc SINE Alu -32 277 203 271 286 0 0 chr2 180415840 180415903 -70271951 + L3b LINE CR1 1275 1337 -246 1747 179 7 17 chr2 180416871 180417172 -70270682 - AluJo SINE Alu -14 298 1 479 273 27 0 chr2 180417754 180417864 -70269990 + L2 LINE L2 3199 3311 -2 1672 284 76 8 chr2 180419092 180419616 -70268238 + MER115 DNA AcHobo 70 629 -64 187 324 155 14 chr2 180420900 180421048 -70266806 - L2 LINE L2 -1 3312 3144 2475 77 0 0 chr2 180421724 180422023 -70265831 - AluY SINE Alu -12 299 1 222 37 0 0 chr2 180422868 180422895 -70264959 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 347 41 20 0 chr2 180422984 180423033 -70264821 + (TG)n Simple_repeat Simple_repeat 2 51 0 23 0 0 0 chr2 180423265 180423288 -70264566 + AT_rich Low_complexity Low_complexity 1 23 0 273 57 0 0 chr2 180424468 180424503 -70263351 + (TTCC)n Simple_repeat Simple_repeat 1 35 0 2165 58 7 0 chr2 180424503 180424778 -70263076 - L1PA7 LINE L1 -3 6151 5875 3541 91 8 108 chr2 180424803 180425463 -70262391 + MER4A LTR ERV1 71 664 0 256 50 25 0 chr2 180427600 180427640 -70260214 + MADE1 DNA Mariner 3 43 -37 557 126 54 0 chr2 180427748 180427859 -70259995 + L1PA14 LINE L1 6042 6158 -3 413 220 0 0 chr2 180427863 180427963 -70259891 + L1 LINE L1 4557 4656 -1490 12263 141 22 18 chr2 180427973 180430133 -70257721 + L1P LINE L1 11 2180 -3966 326 326 57 53 chr2 180430269 180430496 -70257358 - L2 LINE L2 -191 3081 2854 2304 99 0 0 chr2 180430685 180430979 -70256875 + AluY SINE Alu 1 294 -17 580 281 159 21 chr2 180431252 180431821 -70256033 - L1ME4a LINE L1 -1 6120 5473 1683 169 19 44 chr2 180431852 180432171 -70255683 - AluJo SINE Alu -1 311 1 272 95 0 24 chr2 180432828 180432870 -70254984 + (TTTTC)n Simple_repeat Simple_repeat 4 44 0 534 196 22 28 chr2 180432871 180433050 -70254804 + CT-rich Low_complexity Low_complexity 2 179 0 1658 189 3 22 chr2 180433051 180433454 -70254400 - AluJo SINE Alu 0 397 1 787 275 50 86 chr2 180433990 180434209 -70253645 - L2 LINE L2 -1 3312 3112 2278 120 0 0 chr2 180434209 180434508 -70253346 + AluSx SINE Alu 1 299 -13 787 275 50 86 chr2 180434508 180434684 -70253170 - L2 LINE L2 -201 3112 2931 2424 110 48 5 chr2 180434840 180435240 -70252614 + MSTA LTR MaLR 1 417 -11 387 337 60 51 chr2 180435617 180436186 -70251668 - L2 LINE L2 -472 2842 2269 232 336 94 0 chr2 180436191 180436340 -70251514 + L2 LINE L2 2245 2407 -907 2152 106 3 10 chr2 180436612 180436923 -70250931 + AluSp SINE Alu 1 309 -4 277 262 12 12 chr2 180437480 180437564 -70250290 - L1ME4a LINE L1 -82 6039 5956 344 261 38 13 chr2 180437942 180438099 -70249755 - L1MC5 LINE L1 -787 7174 7014 518 216 22 36 chr2 180439477 180439616 -70248238 + MIR SINE MIR 124 260 -2 210 118 0 0 chr2 180439619 180439653 -70248201 + (CAG)n Simple_repeat Simple_repeat 2 35 0 2099 145 0 0 chr2 180442050 180442354 -70245500 - AluSx SINE Alu -8 304 1 22 35 0 0 chr2 180442555 180442584 -70245270 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 180442694 180442718 -70245136 + AT_rich Low_complexity Low_complexity 1 24 0 219 243 203 40 chr2 180442757 180442831 -70245023 + MIR SINE MIR 33 118 -90 1943 161 7 0 chr2 180443240 180443532 -70244322 + AluSx SINE Alu 1 294 -18 31 58 0 0 chr2 180443566 180443618 -70244236 + AT_rich Low_complexity Low_complexity 1 52 0 491 226 96 11 chr2 180445286 180445463 -70242391 - L1ME4a LINE L1 -362 5759 5568 437 192 160 51 chr2 180445724 180445880 -70241974 + MER104 DNA MER2_type 5 177 -3 1918 163 0 3 chr2 180446145 180446451 -70241403 + AluSx SINE Alu 1 305 -7 1680 84 0 9 chr2 180446648 180446862 -70240992 - AluSg/x SINE Alu -17 295 84 2209 101 20 0 chr2 180447141 180447438 -70240416 - AluSq SINE Alu -10 303 1 285 307 121 77 chr2 180447562 180448002 -70239852 + L2 LINE L2 2245 2703 -611 22 35 0 0 chr2 180448523 180448552 -70239302 + AT_rich Low_complexity Low_complexity 1 29 0 186 43 0 0 chr2 180449117 180449140 -70238714 + (CAAG)n Simple_repeat Simple_repeat 2 24 0 3896 210 22 31 chr2 180451850 180452239 -70235615 - L1MA9 LINE L1 -40 6272 5881 1820 181 10 0 chr2 180452239 180452532 -70235322 - AluSx SINE Alu -16 296 1 3896 210 22 31 chr2 180452532 180453128 -70234726 - L1MA9 LINE L1 -431 5881 5296 1414 169 0 32 chr2 180453138 180453387 -70234467 - AluJo SINE Alu -8 304 64 2947 189 1 39 chr2 180453391 180454086 -70233768 - L1MA9 LINE L1 -835 5311 4643 23358 61 3 1 chr2 180454090 180457932 -70229922 - L1PA6 LINE L1 0 6154 2307 964 294 56 46 chr2 180459193 180459927 -70227927 + HAL1b LINE L1 52 792 -556 488 259 52 47 chr2 180459933 180460145 -70227709 - LTR40c LTR ERVL -157 308 96 646 261 75 19 chr2 180460429 180460747 -70227107 - L1M4 LINE L1 -1247 4899 4564 444 271 75 20 chr2 180460753 180460952 -70226902 - MLT1L LTR MaLR -23 592 383 1696 170 37 0 chr2 180461048 180461343 -70226511 - AluJb SINE Alu 0 305 1 259 231 0 31 chr2 180461924 180461989 -70225865 + CT-rich Low_complexity Low_complexity 5 67 0 908 197 28 31 chr2 180463348 180463561 -70224293 + MER8 DNA MER2_type 1 344 -1 228 35 0 0 chr2 180463600 180463629 -70224225 + (CA)n Simple_repeat Simple_repeat 2 30 0 212 335 98 38 chr2 180463813 180464079 -70223775 + L2 LINE L2 2368 2649 -665 335 100 67 0 chr2 180464364 180464424 -70223430 - MER92C LTR ERV1 0 554 491 554 239 40 23 chr2 180464499 180464675 -70223179 - MER92C LTR ERV1 -375 179 1 713 292 71 43 chr2 180464743 180465181 -70222673 + LTR33 LTR ERVL 59 508 -13 308 359 203 18 chr2 180465190 180465466 -70222388 + L2 LINE L2 2946 3272 0 2159 132 7 0 chr2 180465534 180465837 -70222017 - AluSx SINE Alu -7 305 1 382 211 35 44 chr2 180466632 180466746 -70221108 + MER94 DNA DNA 12 124 -10 920 244 14 5 chr2 180466950 180467171 -70220683 - MER58A DNA MER1_type -1 223 1 2325 159 157 9 chr2 180467378 180467422 -70220432 - MLT2B1 LTR ERVL 0 520 484 701 23 11 0 chr2 180467422 180467509 -70220345 + (TAGA)n Simple_repeat Simple_repeat 1 88 0 2325 159 157 9 chr2 180467509 180467917 -70219937 - MLT2B1 LTR ERVL -36 484 1 606 181 116 7 chr2 180468189 180468327 -70219527 - MER77 LTR ERV1 -7 598 446 527 204 125 69 chr2 180468614 180468830 -70219024 - MER77 LTR ERV1 -333 272 45 292 286 59 25 chr2 180469406 180469525 -70218329 + L2 LINE L2 3183 3305 -8 654 231 134 8 chr2 180469527 180469765 -70218089 - LTR37B LTR ERV1 -4 464 197 229 182 0 0 chr2 180470062 180470106 -70217748 + L2 LINE L2 3270 3313 0 481 274 79 12 chr2 180470196 180470360 -70217494 + MIR SINE MIR 13 187 -75 879 264 34 3 chr2 180470415 180470737 -70217117 - MLT1G1 LTR MaLR -301 289 1 2224 148 86 40 chr2 180471168 180471493 -70216361 + LTR48 LTR ERV1 1 310 -477 1975 150 3 0 chr2 180471493 180471787 -70216067 + AluSx SINE Alu 1 295 -17 2224 148 86 40 chr2 180471787 180472137 -70215717 + LTR48 LTR ERV1 310 787 0 208 315 120 32 chr2 180472173 180472389 -70215465 + MIR3 SINE MIR 12 246 -16 2300 71 3 14 chr2 180473279 180473575 -70214279 + AluY SINE Alu 1 293 -18 183 42 0 0 chr2 180473578 180473602 -70214252 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 2115 145 0 0 chr2 180473749 180474060 -70213794 - AluSx SINE Alu -1 311 1 487 328 78 11 chr2 180474636 180474816 -70213038 - MIR SINE MIR -4 258 67 295 348 0 37 chr2 180474932 180475067 -70212787 - MER5A DNA MER1_type -1 188 59 234 315 24 55 chr2 180474957 180475084 -70212770 + MER5A DNA MER1_type 37 159 -30 * 21 36 0 0 chr2 180475169 180475197 -70212657 + AT_rich Low_complexity Low_complexity 1 28 0 853 232 65 4 chr2 180475227 180475473 -70212381 + L1ME1 LINE L1 5897 6157 -9 324 347 76 7 chr2 180476649 180476793 -70211061 - L3 LINE CR1 -121 1456 1303 404 255 7 78 chr2 180476796 180476937 -70210917 - L2 LINE L2 0 3272 3142 1739 159 31 14 chr2 180477129 180477418 -70210436 - AluJo SINE Alu -18 294 1 432 0 0 0 chr2 180477428 180477476 -70210378 + (TAA)n Simple_repeat Simple_repeat 2 49 0 310 315 37 28 chr2 180478253 180478361 -70209493 - MIR SINE MIR -146 116 8 196 143 0 0 chr2 180478410 180478438 -70209416 + L2 LINE L2 3217 3244 -28 3684 224 96 48 chr2 180478438 180479286 -70208568 + HsTC2 DNA Tc2 8 814 -1084 1614 203 154 58 chr2 180479286 180479857 -70207997 + MLT1E2 LTR MaLR 1 626 0 3684 224 96 48 chr2 180479857 180480624 -70207230 + HsTC2 DNA Tc2 814 1897 -1 2254 86 7 3 chr2 180481262 180481554 -70206300 - AluSc SINE Alu -16 293 1 237 169 118 123 chr2 180481901 180482096 -70205758 + MER112 DNA MER1_type 67 260 0 550 326 114 34 chr2 180482440 180482851 -70205003 - LTR16B LTR ERVL -16 448 5 3592 164 30 11 chr2 180482977 180483704 -70204150 - L1MB7 LINE L1 -16 6168 5428 1869 154 7 0 chr2 180483724 180484004 -70203850 - AluSx SINE Alu -30 282 1 639 223 45 25 chr2 180484524 180484766 -70203088 - L1MA9 LINE L1 -38 6274 6028 284 315 28 45 chr2 180485323 180485501 -70202353 - L3b LINE CR1 -206 1377 1203 5087 160 13 14 chr2 180485652 180486920 -70200934 + L1MB2 LINE L1 4904 6170 -1 2331 90 3 3 chr2 180486923 180487222 -70200632 + AluSp SINE Alu 1 299 -14 1134 272 8 4 chr2 180487261 180487518 -70200336 - MIR SINE MIR 0 262 5 180 154 0 51 chr2 180487692 180487731 -70200123 + MIR3 SINE MIR 151 187 -21 551 352 20 5 chr2 180488346 180488542 -70199312 + MIR SINE MIR 56 254 -8 487 239 59 46 chr2 180489438 180489677 -70198177 - L1MC5 LINE L1 -71 7890 7649 267 219 48 29 chr2 180489715 180489820 -70198034 - L1MC5 LINE L1 -405 7556 7450 452 188 0 0 chr2 180489827 180489907 -70197947 - MER81 DNA DNA -5 109 30 538 180 55 8 chr2 180489910 180490038 -70197816 - L1MC5 LINE L1 -514 7447 7314 1007 101 17 17 chr2 180490048 180490226 -70197628 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 409 182 20 0 chr2 180490227 180490326 -70197528 + CT-rich Low_complexity Low_complexity 3 103 0 1798 165 24 24 chr2 180490514 180490890 -70196964 - MLT1B LTR MaLR -6 384 9 333 297 60 32 chr2 180490975 180491160 -70196694 + MLT1L LTR MaLR 100 289 -326 2105 124 7 7 chr2 180492011 180492310 -70195544 + AluSg SINE Alu 1 299 -11 27 0 0 0 chr2 180492656 180492683 -70195171 + AT_rich Low_complexity Low_complexity 1 27 0 2126 138 0 3 chr2 180492695 180492991 -70194863 - AluSq SINE Alu -18 295 1 252 246 4 39 chr2 180493818 180493918 -70193936 - MIR SINE MIR -130 78 20 10615 182 22 14 chr2 180494508 180495928 -70191926 - L1PA16 LINE L1 -3 6163 4755 194 0 39 0 chr2 180495928 180495954 -70191900 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 2110 123 0 0 chr2 180495954 180496231 -70191623 - AluSx SINE Alu -35 277 1 10615 182 22 14 chr2 180496231 180496539 -70191315 - L1PA16 LINE L1 -1411 4755 4451 198 0 0 0 chr2 180496539 180496561 -70191293 + (TG)n Simple_repeat Simple_repeat 1 22 0 10615 182 22 14 chr2 180496561 180498227 -70189627 - L1PA16 LINE L1 -1715 4451 2742 870 161 23 0 chr2 180498227 180498389 -70189465 + L1MA8 LINE L1 6113 6290 -1 512 78 0 0 chr2 180498435 180498531 -70189323 - AluSp/q SINE Alu 0 317 222 1030 190 0 2 chr2 180500787 180501044 -70186810 - AluJb SINE Alu -7 305 1 198 71 0 0 chr2 180501142 180501170 -70186684 + (TC)n Simple_repeat Simple_repeat 1 28 0 1452 197 0 8 chr2 180501173 180501427 -70186427 - AluJo SINE Alu -26 286 35 2533 73 3 0 chr2 180501548 180501850 -70186004 - AluSp SINE Alu -8 305 3 183 261 108 31 chr2 180502616 180502681 -70185173 + L3 LINE CR1 1408 1477 -100 22 0 0 0 chr2 180502937 180502959 -70184895 + AT_rich Low_complexity Low_complexity 1 22 0 7834 13 1 0 chr2 180504045 180504946 -70182908 + L1PA2 LINE L1 5254 6155 0 274 311 14 0 chr2 180505742 180505816 -70182038 - L2 LINE L2 -1 3312 3238 341 298 105 35 chr2 180506004 180506175 -70181679 + MLT1K LTR MaLR 69 251 -337 670 196 54 65 chr2 180506284 180506452 -70181402 - FRAM SINE Alu 0 166 1 52 30 0 0 chr2 180506474 180506540 -70181314 + AT_rich Low_complexity Low_complexity 1 66 0 222 346 67 59 chr2 180506658 180506912 -70180942 - L2 LINE L2 -213 3059 2804 196 264 181 67 chr2 180506886 180507140 -70180714 - L2 LINE L2 -629 2685 2403 * 23 0 0 0 chr2 180507177 180507200 -70180654 + AT_rich Low_complexity Low_complexity 1 23 0 878 37 0 0 chr2 180507226 180507334 -70180520 - L1PA4 LINE L1 -3 6152 6045 730 265 68 48 chr2 180507346 180507640 -70180214 - L2 LINE L2 -949 2365 2066 2516 238 107 28 chr2 180507645 180508572 -70179282 + MER69B DNA AcHobo 117 1116 -110 2477 64 0 0 chr2 180508596 180508892 -70178962 - AluY SINE Alu -15 296 1 226 150 50 0 chr2 180508900 180508960 -70178894 - L1MB3 LINE L1 -1 6182 6120 686 289 25 23 chr2 180508993 180509360 -70178494 - L1ME LINE L1 -472 5649 5287 436 326 187 38 chr2 180509380 180510017 -70177837 - L1ME LINE L1 -913 5233 4502 973 287 56 94 chr2 180510039 180510276 -70177578 - L1ME LINE L1 -2177 3969 3724 2256 109 0 3 chr2 180510276 180510570 -70177284 + AluSg SINE Alu 1 293 -17 973 287 56 94 chr2 180510570 180511248 -70176606 - L1ME LINE L1 -2422 3724 3089 2221 74 0 55 chr2 180512597 180512908 -70174946 + AluY SINE Alu 1 294 -17 212 0 0 35 chr2 180512912 180512941 -70174913 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 211 376 0 0 chr2 180513049 180513142 -70174712 - L2 LINE L2 -995 2319 2227 4327 138 42 14 chr2 180513962 180514744 -70173110 + L1MC2 LINE L1 5540 6343 -1 547 237 8 0 chr2 180514755 180514873 -70172981 + L1MB7 LINE L1 5817 5935 -249 910 289 74 28 chr2 180515532 180516148 -70171706 + L1MC4a LINE L1 5268 5758 -363 235 234 47 0 chr2 180516379 180516443 -70171411 + MIR SINE MIR 187 253 -9 334 265 61 14 chr2 180516476 180516623 -70171231 + L1ME4a LINE L1 5645 5798 -323 723 217 72 18 chr2 180516640 180516861 -70170993 - L1MB8 LINE L1 -1 6177 5945 301 213 62 0 chr2 180517006 180517086 -70170768 + L1ME4a LINE L1 5964 6048 -73 2254 114 0 0 chr2 180517878 180518175 -70169679 - AluSx SINE Alu -15 297 1 28 0 0 0 chr2 180518451 180518479 -70169375 + AT_rich Low_complexity Low_complexity 1 28 0 180 176 0 0 chr2 180519309 180519343 -70168511 + (TA)n Simple_repeat Simple_repeat 2 35 0 264 30 0 0 chr2 180519343 180519376 -70168478 + (GA)n Simple_repeat Simple_repeat 2 34 0 350 326 70 17 chr2 180519772 180520128 -70167726 + L1MEc LINE L1 1424 1748 -861 358 337 91 33 chr2 180520580 180520823 -70167031 + L3b LINE CR1 1292 1548 -35 474 321 110 38 chr2 180521652 180521732 -70166122 + MIR SINE MIR 12 85 -177 1686 218 126 24 chr2 180521732 180522201 -70165653 - LTR40a LTR ERVL 0 519 3 474 321 110 38 chr2 180522201 180522329 -70165525 + MIR SINE MIR 85 235 -27 182 281 53 0 chr2 180522520 180522577 -70165277 - MIR SINE MIR -123 139 80 294 95 0 0 chr2 180523569 180523611 -70164243 + (CGTG)n Simple_repeat Simple_repeat 1 42 0 2238 97 7 3 chr2 180524923 180525221 -70162633 + AluSx SINE Alu 1 299 -13 767 276 97 52 chr2 180526300 180526938 -70160916 - L2 LINE L2 -91 3222 2567 594 249 231 7 chr2 180527021 180527302 -70160552 - L2 LINE L2 -1007 2307 1964 1216 190 188 31 chr2 180527326 180527715 -70160139 - LTR7 LTR ERV1 0 450 1 4166 117 64 17 chr2 180528245 180528905 -70158949 - LTR8 LTR ERV1 0 691 1 2222 121 0 6 chr2 180528991 180529305 -70158549 - AluSx SINE Alu 0 312 1 31 0 0 0 chr2 180529658 180529689 -70158165 + AT_rich Low_complexity Low_complexity 1 31 0 276 167 30 48 chr2 180529976 180530144 -70157710 + (TA)n Simple_repeat Simple_repeat 1 165 0 1999 131 10 13 chr2 180530358 180530656 -70157198 - AluSg SINE Alu -13 297 1 3797 109 39 5 chr2 180530744 180531358 -70156496 - LTR24C LTR ERV1 0 635 1 384 246 109 0 chr2 180531912 180532022 -70155832 - MIR3 SINE MIR -6 202 81 390 211 191 40 chr2 180532957 180533109 -70154745 - MIR SINE MIR -3 259 85 417 146 0 0 chr2 180533847 180533929 -70153925 - L1MA7 LINE L1 -6 6285 6204 1163 204 32 0 chr2 180533963 180534213 -70153641 - L1MA7 LINE L1 -232 6059 5802 2102 121 0 3 chr2 180534214 180534511 -70153343 - AluSx SINE Alu -16 296 1 357 52 103 0 chr2 180534649 180534707 -70153147 - L1PA13 LINE L1 0 6163 6100 1518 211 9 16 chr2 180534707 180535025 -70152829 - MER4D LTR ERV1 -39 864 549 1588 146 36 7 chr2 180535058 180535332 -70152522 - MER49 LTR ERV1 -641 282 1 666 198 0 0 chr2 180536350 180536507 -70151347 + FLAM_A SINE Alu 6 162 0 812 214 107 93 chr2 180537517 180537882 -70149972 - LTR37B LTR ERV1 -4 464 91 1092 227 4 9 chr2 180537882 180538107 -70149747 - MER58A DNA MER1_type 0 224 1 812 214 107 93 chr2 180538107 180538172 -70149682 - LTR37B LTR ERV1 -377 91 28 315 356 25 24 chr2 180538283 180538475 -70149379 + L1ME LINE L1 5393 5589 -532 863 75 0 98 chr2 180538475 180538608 -70149246 - AluSg/x SINE Alu -26 286 167 244 327 56 28 chr2 180538635 180538849 -70149005 + L1ME LINE L1 5612 5831 -290 3765 171 25 3 chr2 180539136 180539869 -70147985 - L1 LINE L1 -1215 5167 4419 10333 214 41 15 chr2 180539894 180542846 -70145008 - L1MA7 LINE L1 -728 5452 2426 638 148 15 23 chr2 180542842 180543006 -70144848 - L1M4 LINE L1 -352 5822 5662 * 7360 34 13 6 chr2 180543007 180544289 -70143565 - L1PA5 LINE L1 -1 6153 4863 1237 203 8 12 chr2 180544290 180544671 -70143183 - L1M4c LINE L1 -3732 2912 2535 7039 216 40 23 chr2 180544673 180546308 -70141546 - L1M4c LINE L1 -4266 2380 633 432 0 0 0 chr2 180546308 180546356 -70141498 + (TG)n Simple_repeat Simple_repeat 2 49 0 7039 216 40 23 chr2 180546356 180546983 -70140871 - L1M4c LINE L1 -6013 633 18 230 152 0 0 chr2 180548288 180548334 -70139520 + LTR66 LTR ERVL 394 439 -171 338 289 0 0 chr2 180548338 180548428 -70139426 - L1MC4 LINE L1 -1339 6703 6614 314 330 0 0 chr2 180548382 180548470 -70139384 + L1MC4 LINE L1 6614 6701 -1341 * 297 155 0 0 chr2 180548471 180548529 -70139325 + (TA)n Simple_repeat Simple_repeat 1 58 0 315 224 79 0 chr2 180548548 180548624 -70139230 - L1MC4 LINE L1 -1347 6695 6614 297 368 103 5 chr2 180548920 180549105 -70138749 - MIR SINE MIR -3 259 57 1918 93 19 0 chr2 180550249 180550518 -70137336 + L1PA12 LINE L1 5895 6168 0 8032 36 1 0 chr2 180550713 180552458 -70135396 - L1PA5 LINE L1 -2 6152 4407 1196 37 0 0 chr2 180552460 180552594 -70135260 - AluY SINE Alu -20 291 158 34 0 0 0 chr2 180552614 180552648 -70135206 + AT_rich Low_complexity Low_complexity 1 34 0 1530 6 0 0 chr2 180552648 180552825 -70135029 - L1P LINE L1 -1731 4415 4239 180 380 35 9 chr2 180552846 180552959 -70134895 + L2 LINE L2 2934 3049 -223 219 36 0 0 chr2 180554248 180554276 -70133578 + (CA)n Simple_repeat Simple_repeat 2 29 0 545 339 145 31 chr2 180555003 180555458 -70132396 + L3 LINE CR1 998 1504 -73 530 318 112 6 chr2 180555463 180555633 -70132221 - MER91A DNA MER1_type -1 195 8 273 313 291 6 chr2 180555902 180556084 -70131770 - MIR SINE MIR -14 248 15 7526 53 14 7 chr2 180556188 180557713 -70130141 + SVA Other Other 1 1380 -6 26 0 0 0 chr2 180557713 180557739 -70130115 + AT_rich Low_complexity Low_complexity 1 26 0 1965 168 31 11 chr2 180557780 180558138 -70129716 + MLT1A1 LTR MaLR 1 365 0 222 222 14 69 chr2 180558471 180558543 -70129311 + L2 LINE L2 3152 3219 -94 380 359 36 0 chr2 180559018 180559185 -70128669 + MIR SINE MIR 90 262 0 305 302 69 73 chr2 180562747 180562979 -70124875 - L2 LINE L2 -402 2912 2682 194 200 75 0 chr2 180563026 180563066 -70124788 - MIR SINE MIR -88 174 132 1181 177 9 0 chr2 180563659 180563879 -70123975 + MER52-int LTR ERV1 6869 7090 -1 3599 152 40 9 chr2 180563892 180564790 -70123064 - MER61C-int LTR ERV1 -3599 2903 1407 872 72 0 0 chr2 180564790 180564901 -70122953 + AluY SINE Alu 198 308 -3 2535 142 9 5 chr2 180564903 180565344 -70122510 - MER61C-int LTR ERV1 -4464 2645 609 4885 92 26 120 chr2 180565345 180566871 -70120983 - pTR5 LTR ERV1 0 2606 1524 2370 200 12 12 chr2 180566860 180567356 -70120498 - MER61C-int LTR ERV1 -433 4784 4289 * 1207 188 42 89 chr2 180567353 180567856 -70119998 - MER61C-int LTR ERV1 -4764 453 181 * 513 153 20 168 chr2 180567934 180568130 -70119724 - MER61C-int LTR ERV1 -5033 184 18 2170 130 58 49 chr2 180568146 180568576 -70119278 - MER61C LTR ERV1 0 434 1 283 356 25 8 chr2 180568758 180568876 -70118978 - MIR SINE MIR -69 139 20 4148 154 7 16 chr2 180569196 180569730 -70118124 - MER50 LTR ERV1 -8 726 199 2747 110 82 0 chr2 180569730 180569762 -70118092 - MLT2A2 LTR ERVL -2 451 423 447 19 0 0 chr2 180569762 180569814 -70118040 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 2747 110 82 0 chr2 180569814 180570198 -70117656 - MLT2A2 LTR ERVL -30 423 1 4148 154 7 16 chr2 180570198 180570396 -70117458 - MER50 LTR ERV1 -535 199 1 24 0 0 0 chr2 180571503 180571527 -70116327 + AT_rich Low_complexity Low_complexity 1 24 0 1530 196 143 106 chr2 180571652 180571715 -70116139 - MLT1E1 LTR MaLR 0 654 595 2226 92 0 3 chr2 180571715 180572047 -70115807 - AluSx SINE Alu 0 331 1 1530 196 143 106 chr2 180572047 180572613 -70115241 - MLT1E1 LTR MaLR -59 595 1 2160 109 0 33 chr2 180572613 180572915 -70114939 + AluSc SINE Alu 1 292 -17 1738 253 105 24 chr2 180573107 180574014 -70113840 + L2 LINE L2 2316 3305 -8 883 276 22 12 chr2 180577525 180577847 -70110007 - L1ME4a LINE L1 -242 5879 5555 190 355 66 41 chr2 180577911 180578108 -70109746 + L2 LINE L2 2067 2268 -1046 423 274 76 19 chr2 180578784 180578941 -70108913 + MIR SINE MIR 96 261 -1 338 347 65 0 chr2 180579074 180579198 -70108656 + L2 LINE L2 3137 3268 -4 305 194 0 16 chr2 180579249 180579311 -70108543 + L1ME3A LINE L1 3837 3897 -2249 2766 274 30 12 chr2 180579350 180580532 -70107322 + L1ME3A LINE L1 4212 5414 -740 411 222 20 0 chr2 180580532 180580631 -70107223 + MER94 DNA DNA 1 101 -33 768 244 60 28 chr2 180580642 180580925 -70106929 + L1ME3A LINE L1 5405 5696 -466 567 265 7 0 chr2 180580936 180581087 -70106767 + L1ME3A LINE L1 6019 6170 0 396 71 0 0 chr2 180582453 180582509 -70105345 + (GA)n Simple_repeat Simple_repeat 2 57 0 288 333 56 0 chr2 180582509 180582599 -70105255 - MIR SINE MIR -93 115 21 851 252 30 34 chr2 180583744 180584006 -70103848 - MIR SINE MIR 0 262 2 243 88 0 0 chr2 180584036 180584070 -70103784 + (TA)n Simple_repeat Simple_repeat 2 35 0 221 274 14 0 chr2 180584081 180584154 -70103700 + (TA)n Simple_repeat Simple_repeat 2 75 0 2220 105 24 0 chr2 180586141 180586436 -70101418 - AluSq SINE Alu -11 302 1 186 354 0 0 chr2 180586720 180586785 -70101069 + L2 LINE L2 3244 3308 -5 189 182 159 0 chr2 180587026 180587070 -70100784 + MIR SINE MIR 157 207 -55 255 265 30 8 chr2 180588040 180588172 -70099682 + (TA)n Simple_repeat Simple_repeat 1 135 0 2772 169 31 29 chr2 180589208 180589793 -70098061 - LTR60 LTR ERV1 0 586 1 22 35 0 0 chr2 180589807 180589836 -70098018 + AT_rich Low_complexity Low_complexity 1 29 0 385 235 108 0 chr2 180590035 180590137 -70097717 + MIR SINE MIR 40 152 -110 280 49 0 0 chr2 180590146 180590187 -70097667 + L1MA3 LINE L1 6261 6301 -4 248 267 13 13 chr2 180591769 180591844 -70096010 + L2 LINE L2 2568 2642 -672 2808 121 22 2 chr2 180593349 180593795 -70094059 - L1MB3 LINE L1 -11 6172 5718 2040 115 7 17 chr2 180594907 180595227 -70092627 + AluJb SINE Alu 2 318 0 875 264 47 13 chr2 180595337 180595723 -70092131 - L1MEc LINE L1 -4800 2322 1924 236 172 16 16 chr2 180595728 180595792 -70092062 - L1MEc LINE L1 -5208 1733 1670 357 287 61 6 chr2 180595885 180596066 -70091788 - L1MEc LINE L1 -4970 1453 1263 198 329 103 26 chr2 180596623 180596857 -70090997 - L2 LINE L2 -41 3272 3021 29 0 0 0 chr2 180596944 180596973 -70090881 + AT_rich Low_complexity Low_complexity 1 29 0 4779 162 34 7 chr2 180596973 180598716 -70089138 - L1PB4 LINE L1 -13 6143 3507 234 0 0 0 chr2 180598716 180598742 -70089112 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4779 162 34 7 chr2 180598742 180598779 -70089075 - L1PB4 LINE L1 -2649 3507 3472 277 221 39 0 chr2 180599211 180599288 -70088566 - MLT1H1 LTR MaLR 0 555 476 2076 283 32 21 chr2 180599312 180600352 -70087502 - L1ME2 LINE L1 -127 6037 4990 306 204 146 10 chr2 180600386 180600489 -70087365 - L1ME2 LINE L1 -1231 4915 4799 649 318 59 28 chr2 180600616 180600902 -70086952 - L2 LINE L2 0 3313 3019 216 300 122 44 chr2 180601334 180601424 -70086430 + L2 LINE L2 3146 3242 -30 1085 187 53 19 chr2 180601556 180601765 -70086089 + AluJo SINE Alu 85 300 -12 303 323 188 11 chr2 180601822 180602008 -70085846 + MIR SINE MIR 41 259 -3 3116 154 40 2 chr2 180602464 180603047 -70084807 - L1MC3 LINE L1 0 7785 7181 340 190 25 13 chr2 180603047 180603126 -70084728 - MLT1F1 LTR MaLR -450 117 38 456 185 6 45 chr2 180603126 180603283 -70084571 - L1MC3 LINE L1 -684 7101 6951 406 338 79 25 chr2 180603796 180604074 -70083780 - L2 LINE L2 -342 2972 2680 244 284 157 13 chr2 180604157 180604386 -70083468 + MARNA DNA Mariner 305 566 -20 631 230 60 85 chr2 180604437 180604672 -70083182 - MIR SINE MIR -11 251 23 369 0 0 0 chr2 180605952 180605993 -70081861 + (TA)n Simple_repeat Simple_repeat 2 42 0 638 173 38 0 chr2 180606126 180606259 -70081595 + L1MA4A LINE L1 6158 6295 -8 2157 109 0 3 chr2 180606844 180607162 -70080692 + AluSg SINE Alu 1 317 0 1289 260 90 15 chr2 180607482 180607987 -70079867 + L2 LINE L2 2771 3307 -6 207 0 0 0 chr2 180608368 180608391 -70079463 + (T)n Simple_repeat Simple_repeat 1 23 0 387 166 26 119 chr2 180608521 180608672 -70079182 + L1ME3 LINE L1 5901 6037 -125 222 279 125 7 chr2 180608681 180608817 -70079037 + L2 LINE L2 2702 2853 -461 339 293 99 22 chr2 180608845 180609067 -70078787 + L2 LINE L2 2946 3184 -129 33944 36 2 1 chr2 180610380 180616532 -70071322 - L1PA3 LINE L1 -3 6152 1 482 292 0 21 chr2 180616588 180616732 -70071122 + MLT1I LTR MaLR 1 141 -268 442 256 102 7 chr2 180616736 180616873 -70070981 - MIR SINE MIR -111 151 2 320 132 35 71 chr2 180617182 180617281 -70070573 - MER66A LTR ERV1 -12 597 395 2248 167 18 43 chr2 180617308 180617745 -70070109 - MER41B LTR ERV1 -80 555 130 701 287 63 12 chr2 180617773 180618027 -70069827 - MER41B-int LTR ERV1 -1 6675 6409 533 158 55 89 chr2 180618199 180618345 -70069509 - MER41B-int LTR ERV1 -277 6054 5914 700 216 22 16 chr2 180618365 180618550 -70069304 - MER41B-int LTR ERV1 -541 5790 5605 276 30 0 0 chr2 180618972 180619005 -70068849 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 372 232 7 22 chr2 180619060 180619198 -70068656 + GA-rich Low_complexity Low_complexity 4 139 0 427 196 35 0 chr2 180619579 180619683 -70068171 - MLT1H1 LTR MaLR -458 97 3 2080 131 3 6 chr2 180620126 180620438 -70067416 + AluSx SINE Alu 1 311 -1 15773 115 22 11 chr2 180620472 180621543 -70066311 + Tigger1 DNA MER2_type 90 1148 -1270 824 196 0 0 chr2 180621543 180621676 -70066178 + FLAM_A SINE Alu 1 133 0 15773 115 22 11 chr2 180621676 180622909 -70064945 + Tigger1 DNA MER2_type 1148 2418 0 22 0 0 0 chr2 180622984 180623006 -70064848 + AT_rich Low_complexity Low_complexity 1 22 0 1945 177 5 58 chr2 180624635 180624748 -70063106 - MLT1B LTR MaLR 0 390 273 2741 87 30 8 chr2 180624748 180625115 -70062739 - THE1C LTR MaLR 0 375 1 1945 177 5 58 chr2 180625115 180625413 -70062441 - MLT1B LTR MaLR -117 273 1 776 136 136 18 chr2 180625598 180625767 -70062087 - MER53 DNA DNA 0 189 1 528 308 80 18 chr2 180625909 180626185 -70061669 - L2 LINE L2 0 3313 3021 403 282 0 0 chr2 180626459 180626562 -70061292 - L2 LINE L2 -550 2764 2662 1120 282 140 20 chr2 180626589 180626646 -70061208 - L2 LINE L2 -887 2427 2378 2220 175 65 37 chr2 180626646 180627137 -70060717 - MLT1D LTR MaLR 0 505 1 1120 282 140 20 chr2 180627137 180627621 -70060233 - L2 LINE L2 -936 2378 1821 1022 231 14 45 chr2 180628501 180628627 -70059227 + L1M4 LINE L1 4985 5113 -1033 1716 159 69 0 chr2 180628627 180628903 -70058951 + AluJb SINE Alu 5 299 -13 1022 231 14 45 chr2 180628903 180629135 -70058719 + L1M4 LINE L1 5113 5332 -814 21 0 0 0 chr2 180629200 180629221 -70058633 + AT_rich Low_complexity Low_complexity 1 21 0 181 266 128 32 chr2 180629533 180629627 -70058227 - MIR SINE MIR 0 262 160 1837 106 4 0 chr2 180629896 180630171 -70057683 - AluSx SINE Alu 0 312 37 291 269 148 0 chr2 180630401 180630509 -70057345 - MIR SINE MIR -137 125 2 324 234 149 50 chr2 180630630 180630771 -70057083 + MER103 DNA DNA 1 155 -11 1888 157 3 7 chr2 180630799 180631092 -70056762 + AluJo SINE Alu 1 292 -20 545 315 60 26 chr2 180631533 180631800 -70056054 - MLT1I LTR MaLR -71 338 63 2104 129 10 3 chr2 180632019 180632322 -70055532 - AluJb SINE Alu -7 305 1 21 0 0 0 chr2 180632521 180632542 -70055312 + AT_rich Low_complexity Low_complexity 1 21 0 305 258 145 63 chr2 180632877 180632986 -70054868 + MIR3 SINE MIR 34 161 -47 695 238 220 5 chr2 180632986 180633200 -70054654 - MIR SINE MIR 0 262 3 305 258 145 63 chr2 180633200 180633249 -70054605 + MIR3 SINE MIR 161 205 -3 464 216 32 24 chr2 180634024 180634149 -70053705 + L2 LINE L2 3188 3313 0 33 66 0 0 chr2 180634245 180634306 -70053548 + AT_rich Low_complexity Low_complexity 1 61 0 2201 113 0 7 chr2 180634585 180634878 -70052976 - AluSg SINE Alu -19 291 1 2104 130 74 34 chr2 180635525 180635848 -70052006 + MER1B DNA MER1_type 2 337 0 204 40 0 0 chr2 180637713 180637738 -70050116 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 268 251 69 103 chr2 180637921 180638124 -70049730 + MER91A DNA MER1_type 1 196 0 183 227 23 23 chr2 180641260 180641304 -70046550 + MIR SINE MIR 103 146 -62 227 292 21 31 chr2 180641697 180641793 -70046061 - MIR SINE MIR -58 204 110 321 26 0 0 chr2 180642716 180642754 -70045100 + (TG)n Simple_repeat Simple_repeat 1 38 0 2319 79 0 29 chr2 180643605 180643921 -70043933 - AluY SINE Alu -4 307 1 240 254 61 53 chr2 180644483 180644597 -70043257 - MIR SINE MIR -43 219 105 586 212 88 7 chr2 180644692 180644829 -70043025 - MIR SINE MIR -6 256 109 282 270 50 95 chr2 180646111 180646311 -70041543 - MLT1K LTR MaLR -210 378 188 201 158 0 0 chr2 180647551 180647589 -70040265 + T-rich Low_complexity Low_complexity 1 38 0 401 192 0 26 chr2 180649178 180649256 -70038598 + L2 LINE L2 3237 3312 -1 534 299 51 0 chr2 180649436 180649593 -70038261 - MIR SINE MIR -87 175 11 454 256 89 21 chr2 180649928 180650119 -70037735 + MIR SINE MIR 49 252 -10 495 257 39 56 chr2 180650866 180651045 -70036809 + MER5B DNA MER1_type 1 176 -2 341 226 32 0 chr2 180651142 180651235 -70036619 + MER103 DNA DNA 11 106 -60 221 192 218 13 chr2 180652215 180652293 -70035561 - MIR SINE MIR -1 261 168 761 203 0 42 chr2 180652563 180652735 -70035119 + FRAM SINE Alu 11 176 0 23 0 0 0 chr2 180652937 180652960 -70034894 + AT_rich Low_complexity Low_complexity 1 23 0 351 231 88 11 chr2 180653953 180654044 -70033810 + MIR SINE MIR 20 117 -91 377 293 134 29 chr2 180655228 180655675 -70032179 - HAL1 LINE L1 -905 1602 1109 478 290 42 16 chr2 180656376 180656547 -70031307 + MER5A DNA MER1_type 4 189 0 539 241 56 88 chr2 180656927 180657176 -70030678 - MLT1I LTR MaLR -71 338 98 273 211 105 21 chr2 180657144 180657239 -70030615 - MLT1K LTR MaLR -386 163 61 * 187 301 157 0 chr2 180659211 180659294 -70028560 - L2 LINE L2 -8 3264 3169 312 219 0 16 chr2 180659345 180659409 -70028445 + L2 LINE L2 3210 3272 0 1650 161 41 17 chr2 180659874 180660165 -70027689 - AluJo SINE Alu -12 300 3 2093 149 16 35 chr2 180660445 180660815 -70027039 + MLT1B LTR MaLR 1 363 -27 318 316 192 5 chr2 180660833 180661026 -70026828 - MIR SINE MIR -14 248 20 797 260 31 51 chr2 180661272 180661526 -70026328 + MIR SINE MIR 2 250 -12 348 256 0 152 chr2 180663998 180664123 -70023731 - L2 LINE L2 0 3272 3167 2030 98 54 0 chr2 180664450 180664602 -70023252 - AluY SINE Alu -19 292 150 240 35 0 0 chr2 180664602 180664631 -70023223 + (TG)n Simple_repeat Simple_repeat 2 30 0 2030 98 54 0 chr2 180664631 180664755 -70023099 - AluY SINE Alu -161 150 1 2219 96 3 0 chr2 180664765 180665093 -70022761 - AluSp SINE Alu 0 329 1 2065 103 39 39 chr2 180665512 180665822 -70022032 - AluSx SINE Alu -2 310 1 245 323 111 42 chr2 180666896 180667085 -70020769 + L2 LINE L2 3071 3272 0 361 316 68 21 chr2 180667253 180667443 -70020411 - MIR SINE MIR -15 247 49 714 125 0 36 chr2 180667535 180667647 -70020207 - FAM SINE Alu -18 167 60 662 292 54 25 chr2 180668043 180668283 -70019571 + MIR SINE MIR 8 254 -8 1839 263 151 19 chr2 180670027 180670803 -70017051 + HAL1 LINE L1 2 879 -1628 1914 135 37 6 chr2 180670867 180671216 -70016638 + L1MB2 LINE L1 5753 6112 -59 295 199 144 109 chr2 180671240 180671552 -70016302 + HAL1 LINE L1 881 1203 -1304 1994 64 0 0 chr2 180671718 180671969 -70015885 + L1PA5 LINE L1 5898 6148 -6 313 187 84 124 chr2 180671978 180672203 -70015651 + L1M1 LINE L1 3210 3425 -4140 1931 246 83 12 chr2 180672208 180672849 -70015005 + HAL1 LINE L1 1338 2023 -484 249 291 9 55 chr2 180674060 180674170 -70013684 + MIR SINE MIR 88 192 -70 223 347 67 71 chr2 180675387 180675626 -70012228 + L2 LINE L2 2962 3199 -73 182 333 0 0 chr2 180675668 180675725 -70012129 + L2 LINE L2 3208 3264 -8 219 315 0 14 chr2 180678314 180678387 -70009467 + L2 LINE L2 3242 3313 0 23 0 0 0 chr2 180678989 180679012 -70008842 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 180680364 180680386 -70007468 + AT_rich Low_complexity Low_complexity 1 22 0 26 64 0 0 chr2 180680957 180681004 -70006850 + AT_rich Low_complexity Low_complexity 1 47 0 240 215 204 21 chr2 180683070 180683163 -70004691 + L2 LINE L2 3204 3313 0 320 254 314 0 chr2 180683290 180683459 -70004395 - L1ME4a LINE L1 -22 6099 5878 809 235 101 13 chr2 180683699 180683937 -70003917 + MIR SINE MIR 4 262 0 21 36 0 0 chr2 180684549 180684577 -70003277 + AT_rich Low_complexity Low_complexity 1 28 0 695 290 158 32 chr2 180685707 180686427 -70001427 + HAL1 LINE L1 274 1084 -1423 1443 237 109 66 chr2 180686457 180687382 -70000472 + HAL1 LINE L1 1166 2130 -377 877 240 27 9 chr2 180687468 180687689 -70000165 + MIR SINE MIR 13 237 -25 336 251 53 123 chr2 180687707 180687759 -70000095 + HAL1 LINE L1 2297 2351 -156 2624 64 0 0 chr2 180687759 180688070 -69999784 + AluY SINE Alu 1 311 0 336 251 53 123 chr2 180688070 180688244 -69999610 + HAL1 LINE L1 2351 2507 0 1989 129 4 0 chr2 180688305 180688609 -69999245 - AluSx SINE Alu 0 305 1 2120 128 7 0 chr2 180688743 180689040 -69998814 + AluSx SINE Alu 1 299 -13 259 276 0 0 chr2 180690946 180691004 -69996850 - MIR SINE MIR -113 95 38 578 331 117 31 chr2 180691178 180692573 -69995281 + L2 LINE L2 835 2348 -966 207 306 64 81 chr2 180692768 180693065 -69994789 + L2 LINE L2 2686 2977 -337 202 239 76 76 chr2 180693207 180693299 -69994555 + L2 LINE L2 3180 3271 -1 3000 79 34 40 chr2 180693408 180693879 -69993975 - L1PA14 LINE L1 0 6161 5694 473 273 99 6 chr2 180694797 180694958 -69992896 - MIR SINE MIR -84 178 3 221 350 41 21 chr2 180695607 180695704 -69992150 - L2 LINE L2 -25 3247 3149 2190 111 3 3 chr2 180696909 180697198 -69990656 + AluSg SINE Alu 1 289 -21 418 272 19 6 chr2 180697201 180697363 -69990491 - MER103 DNA DNA -1 165 2 21 0 0 0 chr2 180697455 180697476 -69990378 + AT_rich Low_complexity Low_complexity 1 21 0 270 321 123 0 chr2 180697826 180697932 -69989922 + L2 LINE L2 3152 3270 -2 609 275 80 0 chr2 180698639 180698839 -69989015 + MIR SINE MIR 47 262 0 191 175 0 25 chr2 180698946 180698986 -69988868 - MIR SINE MIR -6 256 218 21 0 0 0 chr2 180699154 180699175 -69988679 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr2 180699255 180699281 -69988573 + (TTATA)n Simple_repeat Simple_repeat 4 29 0 940 118 0 0 chr2 180699719 180699846 -69988008 - AluSg/x SINE Alu -15 297 171 358 311 126 32 chr2 180700018 180700208 -69987646 - MIR SINE MIR -27 235 28 231 373 87 24 chr2 180700514 180700640 -69987214 + L2 LINE L2 3112 3245 -27 183 80 0 0 chr2 180701704 180701729 -69986125 + (TTA)n Simple_repeat Simple_repeat 1 25 0 242 286 65 0 chr2 180702311 180702388 -69985466 - MIR SINE MIR -100 162 81 1893 172 23 9 chr2 180702638 180702981 -69984873 + MER7A DNA MER2_type 1 346 0 928 196 48 0 chr2 180703938 180704147 -69983707 - MER20 DNA MER1_type 0 219 1 238 360 77 26 chr2 180705876 180706109 -69981745 + L2 LINE L2 2733 2977 -337 309 318 86 0 chr2 180706334 180706485 -69981369 + HAL1 LINE L1 389 552 -1955 592 130 29 65 chr2 180706565 180706703 -69981151 + MER53 DNA DNA 1 133 -56 1229 95 0 0 chr2 180706704 180706883 -69980971 + L1MA4A LINE L1 6118 6296 -7 24 0 0 0 chr2 180706883 180706907 -69980947 + AT_rich Low_complexity Low_complexity 1 24 0 785 221 63 38 chr2 180706939 180707255 -69980599 + HAL1 LINE L1 775 1098 -1409 283 167 13 39 chr2 180707315 180707393 -69980461 + HAL1 LINE L1 2430 2505 -2 462 231 65 0 chr2 180707424 180707532 -69980322 + MIR SINE MIR 53 167 -95 399 293 108 24 chr2 180708191 180708358 -69979496 - MIR3 SINE MIR -24 184 4 261 309 24 8 chr2 180708484 180708607 -69979247 - LTR16C LTR ERVL -15 476 352 280 256 16 66 chr2 180709539 180709660 -69978194 + MIR SINE MIR 107 221 -41 574 256 139 35 chr2 180709865 180709967 -69977887 - MIR SINE MIR 0 262 172 2496 119 52 14 chr2 180709967 180710388 -69977466 - LTR23 LTR ERV1 0 437 1 574 256 139 35 chr2 180710388 180710515 -69977339 - MIR SINE MIR -90 172 9 325 275 33 25 chr2 180710980 180711100 -69976754 + L2 LINE L2 3189 3309 -4 * 343 258 52 10 chr2 180711097 180711194 -69976660 - MIR SINE MIR -77 185 85 192 175 25 0 chr2 180711617 180711657 -69976197 - L2 LINE L2 0 3272 3232 397 263 61 9 chr2 180711990 180712104 -69975750 - L2 LINE L2 -16 3256 3137 2443 81 3 0 chr2 180712689 180712996 -69974858 + AluSp SINE Alu 1 308 -5 389 241 36 9 chr2 180714057 180714169 -69973685 + L1MC4a LINE L1 7017 7131 -677 463 235 38 38 chr2 180714180 180714312 -69973542 + MIR3 SINE MIR 75 206 -2 545 282 74 23 chr2 180714341 180714358 -69973496 + L1ME3A LINE L1 5616 5631 -539 198 71 0 0 chr2 180714358 180714386 -69973468 + (CATATA)n Simple_repeat Simple_repeat 5 32 0 545 282 74 23 chr2 180714386 180714677 -69973177 + L1ME3A LINE L1 5631 5940 -230 2250 119 0 22 chr2 180715054 180715373 -69972481 + AluSq SINE Alu 1 312 -1 1858 182 0 0 chr2 180715479 180715786 -69972068 - AluJb SINE Alu -5 307 1 2053 89 9 58 chr2 180716205 180716530 -69971324 + AluSp SINE Alu 1 309 -4 616 211 24 8 chr2 180716902 180717025 -69970829 - L2 LINE L2 0 3313 3189 306 222 14 0 chr2 180717216 180717288 -69970566 + MIR SINE MIR 48 120 -142 686 282 5 20 chr2 180717292 180717494 -69970360 - MIR SINE MIR -1 261 63 795 165 18 6 chr2 180717598 180717768 -69970086 - MER96B DNA MER1_type? -238 179 8 220 306 16 0 chr2 180717875 180717937 -69969917 + L2 LINE L2 3242 3304 -9 443 226 44 44 chr2 180718128 180718265 -69969589 - MIR SINE MIR -113 149 13 1360 162 51 13 chr2 180718320 180718611 -69969243 - MER61B LTR ERV1 -30 395 1 358 233 52 17 chr2 180719220 180719336 -69968518 + MER103 DNA DNA 38 157 -9 4567 131 70 10 chr2 180719605 180720460 -69967394 - MER4D LTR ERV1 0 866 1 560 316 83 9 chr2 180720461 180720679 -69967175 - MIR SINE MIR -16 246 13 248 280 32 0 chr2 180771177 180771270 -69916584 - L1MC/D LINE L1 -501 5843 5748 2970 200 67 7 chr2 180771868 180772619 -69915235 + MER97a DNA MER1_type? 55 850 -44 528 257 28 14 chr2 180773079 180773223 -69914631 + MIR SINE MIR 23 168 -94 518 224 55 85 chr2 180773550 180773751 -69914103 + MIR SINE MIR 56 250 -12 244 161 0 46 chr2 180774633 180774763 -69913091 + (CACCC)n Simple_repeat Simple_repeat 1 124 0 268 198 37 49 chr2 180774778 180774902 -69912952 + (CACCC)n Simple_repeat Simple_repeat 4 127 -36 188 33 0 33 chr2 180774902 180774932 -69912922 + (CACAC)n Simple_repeat Simple_repeat 1 29 0 268 198 37 49 chr2 180774932 180774969 -69912885 + (CACCC)n Simple_repeat Simple_repeat 127 163 0 208 60 60 40 chr2 180774974 180775024 -69912830 + C-rich Low_complexity Low_complexity 6 56 0 1839 165 3 3 chr2 180776432 180776717 -69911137 - AluJb SINE Alu -23 289 5 206 273 114 45 chr2 180778816 180778948 -69908906 + MIR SINE MIR 108 248 -14 1839 159 7 23 chr2 180780569 180780871 -69906983 + AluJo SINE Alu 6 302 -10 24 32 0 0 chr2 180782328 180782359 -69905495 + AT_rich Low_complexity Low_complexity 1 31 0 828 200 42 17 chr2 180782705 180783152 -69904702 + MLT1D LTR MaLR 1 503 -2 513 275 42 7 chr2 180783155 180783297 -69904557 - MIR SINE MIR -110 152 6 495 236 296 7 chr2 180783377 180783657 -69904197 - MLT1I LTR MaLR -46 363 3 353 204 9 62 chr2 180784967 180785080 -69902774 - MLT1I LTR MaLR 0 409 303 21 0 0 0 chr2 180785803 180785824 -69902030 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr2 180787468 180787510 -69900344 + AT_rich Low_complexity Low_complexity 1 42 0 330 378 24 0 chr2 180789608 180789735 -69898119 - L2 LINE L2 -24 3248 3119 2520 164 35 46 chr2 180789861 180790189 -69897665 + L1M4 LINE L1 4843 5173 -1005 1948 119 22 0 chr2 180790189 180790498 -69897356 + AluSx SINE Alu 1 315 0 2520 164 35 46 chr2 180790498 180791069 -69896785 + L1M4 LINE L1 5173 5724 -454 1872 179 87 8 chr2 180791342 180791823 -69896031 + L1MB8 LINE L1 5628 6146 -32 2186 133 0 3 chr2 180791892 180792194 -69895660 - AluSx SINE Alu -11 301 1 207 0 0 0 chr2 180792241 180792264 -69895590 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1711 190 0 27 chr2 180792278 180792578 -69895276 - AluJb SINE Alu -20 292 1 28 0 0 0 chr2 180793276 180793304 -69894550 + AT_rich Low_complexity Low_complexity 1 28 0 224 240 0 0 chr2 180794118 180794168 -69893686 + MIR SINE MIR 105 154 -108 237 148 74 0 chr2 180794260 180794314 -69893540 - MER103 DNA DNA -106 60 3 23 54 0 0 chr2 180794314 180794351 -69893503 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr2 180797275 180797302 -69890552 + AT_rich Low_complexity Low_complexity 1 27 0 985 100 19 0 chr2 180797576 180797736 -69890118 + (GAAA)n Simple_repeat Simple_repeat 2 164 0 207 0 0 0 chr2 180797855 180797878 -69889976 + (TA)n Simple_repeat Simple_repeat 2 24 0 2084 92 0 104 chr2 180797880 180798215 -69889639 - AluSx SINE Alu 0 312 13 305 271 64 36 chr2 180798250 180798390 -69889464 + L1ME4a LINE L1 5960 6103 -18 279 271 77 35 chr2 180799012 180799182 -69888672 - MER69A DNA AcHobo 0 177 1 189 0 0 0 chr2 180799805 180799826 -69888028 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 308 339 61 0 chr2 180801120 180801235 -69886619 + MIR3 SINE MIR 37 158 -50 2222 115 0 3 chr2 180801515 180801827 -69886027 - AluSq SINE Alu -2 311 1 184 222 0 22 chr2 180801913 180801958 -69885896 + L2 LINE L2 3226 3269 -3 355 114 0 16 chr2 180802036 180802109 -69885745 + Alu SINE Alu 1 52 -250 240 301 0 0 chr2 180802211 180802314 -69885540 + G-rich Low_complexity Low_complexity 1 103 0 * 346 189 28 56 chr2 180802247 180802427 -69885427 + (TGGG)n Simple_repeat Simple_repeat 1 175 0 275 307 0 15 chr2 180802397 180802531 -69885323 + GA-rich Low_complexity Low_complexity 1 132 0 * 205 268 0 0 chr2 180802726 180802767 -69885087 + polypurine Low_complexity Low_complexity 1 41 0 2202 125 3 6 chr2 180803236 180803547 -69884307 - AluSq SINE Alu -3 310 1 383 198 25 25 chr2 180803960 180804117 -69883737 + GA-rich Low_complexity Low_complexity 4 160 0 226 150 38 25 chr2 180804813 180804893 -69882961 + CT-rich Low_complexity Low_complexity 1 81 0 220 345 18 50 chr2 180805408 180805628 -69882226 + L2 LINE L2 2656 2868 -446 374 227 13 0 chr2 180805863 180805938 -69881916 + L2 LINE L2 3197 3272 0 2157 131 36 0 chr2 180806030 180806365 -69881489 - MER7A DNA MER2_type 0 346 2 1170 148 0 16 chr2 180806818 180807000 -69880854 + FRAM SINE Alu 1 176 0 222 250 0 33 chr2 180807651 180807711 -69880143 + GA-rich Low_complexity Low_complexity 1 58 0 261 256 31 31 chr2 180807711 180807840 -69880014 + MLT1-int LTR MaLR 147 275 -1096 1894 159 10 7 chr2 180807987 180808288 -69879566 - AluSx SINE Alu -10 302 1 324 280 157 67 chr2 180808469 180808664 -69879190 + HAL1 LINE L1 85 261 -2246 1762 165 127 26 chr2 180808664 180809088 -69878766 - MLT1C LTR MaLR 0 467 1 324 280 157 67 chr2 180809088 180809235 -69878619 + HAL1 LINE L1 261 458 -2049 286 304 38 94 chr2 180809493 180809917 -69877937 + HAL1 LINE L1 629 1028 -1479 238 271 188 22 chr2 180810195 180810424 -69877430 + L2 LINE L2 2826 3092 -180 249 254 28 0 chr2 180810981 180811052 -69876802 + GA-rich Low_complexity Low_complexity 2 74 0 204 211 26 79 chr2 180811412 180811488 -69876366 + MIR SINE MIR 110 181 -81 546 261 131 9 chr2 180811491 180811713 -69876141 - MIR SINE MIR -4 258 10 194 360 93 0 chr2 180811860 180811946 -69875908 - MIR SINE MIR -77 131 38 238 301 0 21 chr2 180813041 180813134 -69874720 + (TA)n Simple_repeat Simple_repeat 1 91 0 1272 259 47 44 chr2 180813135 180813783 -69874071 - L1MC4a LINE L1 -426 5754 5265 424 341 96 3 chr2 180813797 180814099 -69873755 - L1MC4a LINE L1 -1158 4988 4659 1774 160 32 4 chr2 180814557 180814838 -69873016 - AluJo SINE Alu -23 289 1 380 342 54 25 chr2 180816068 180816291 -69871563 + MIR SINE MIR 13 233 -29 281 211 49 148 chr2 180817143 180817179 -69870675 - MLT1J LTR MaLR -123 388 350 1918 144 6 35 chr2 180817179 180817498 -69870356 + AluSx SINE Alu 1 310 -2 281 211 49 148 chr2 180817498 180817603 -69870251 - MLT1J LTR MaLR -161 350 261 1608 132 15 41 chr2 180817603 180817869 -69869985 - THE1B LTR MaLR 0 364 106 366 209 0 0 chr2 180817982 180818111 -69869743 + G-rich Low_complexity Low_complexity 1 129 0 11103 105 10 11 chr2 180818116 180819681 -69868173 - THE1B-int LTR MaLR -17 1563 1 2386 113 5 88 chr2 180819681 180820078 -69867776 - THE1B LTR MaLR 0 364 1 561 245 137 29 chr2 180820734 180820938 -69866916 + MIR SINE MIR 5 230 -32 22 0 0 0 chr2 180820956 180820978 -69866876 + AT_rich Low_complexity Low_complexity 1 22 0 773 289 58 56 chr2 180821572 180822035 -69865819 - L2 LINE L2 -507 2807 2344 192 398 55 31 chr2 180823342 180823470 -69864384 - L2 LINE L2 -26 3246 3116 199 0 0 61 chr2 180823506 180823539 -69864315 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 3473 240 36 19 chr2 180823540 180824493 -69863361 + L1MEc LINE L1 98 1066 -5330 2370 82 0 16 chr2 180824502 180824807 -69863047 + AluSc SINE Alu 1 300 -9 527 205 0 16 chr2 180825125 180825247 -69862607 - MER20B DNA MER1_type 0 783 664 1036 278 59 33 chr2 180825637 180826190 -69861664 - L1ME3 LINE L1 -306 5856 5201 24 77 0 0 chr2 180826212 180826264 -69861590 + AT_rich Low_complexity Low_complexity 1 52 0 699 272 47 49 chr2 180826289 180826675 -69861179 - L1ME3 LINE L1 -1112 5034 4650 446 217 50 8 chr2 180826679 180826799 -69861055 - MER20B DNA MER1_type -114 669 545 311 213 16 0 chr2 180826795 180826856 -69860998 - MER20B DNA MER1_type -716 67 6 * 2191 109 0 10 chr2 180826966 180827268 -69860586 - AluSq SINE Alu -10 303 5 556 173 121 46 chr2 180828199 180828372 -69859482 + MER53 DNA DNA 1 186 -3 366 247 34 17 chr2 180828492 180828788 -69859066 + AluY SINE Alu 1 301 0 348 245 0 43 chr2 180828789 180828883 -69858971 + L1MC4 LINE L1 6614 6703 -1339 312 274 48 0 chr2 180828813 180828897 -69858957 - L1MC4 LINE L1 -1339 6703 6616 * 498 237 204 7 chr2 180828898 180829206 -69858648 + L1MEc LINE L1 1067 1435 -4961 620 313 43 5 chr2 180829498 180829706 -69858148 + MIR SINE MIR 34 249 -13 1100 157 147 0 chr2 180829924 180830115 -69857739 + MER20B DNA MER1_type 1 219 0 412 289 77 41 chr2 180830116 180830310 -69857544 + MIR SINE MIR 57 257 -5 992 248 88 15 chr2 180830693 180831036 -69856818 + L1MC4a LINE L1 5575 5942 -1866 621 324 13 25 chr2 180831569 180831807 -69856047 + L3 LINE CR1 1317 1551 -26 2233 77 7 3 chr2 180832098 180832408 -69855446 + AluY SINE Alu 1 311 0 26 82 0 0 chr2 180836950 180837011 -69850843 + AT_rich Low_complexity Low_complexity 1 61 0 309 293 14 88 chr2 180840019 180840166 -69847688 - MIR3 SINE MIR -64 144 9 5269 130 13 5 chr2 180840176 180840946 -69846908 + LTR39 LTR ERV1 8 783 0 464 315 5 43 chr2 180841660 180841844 -69846010 - MER5B DNA MER1_type -1 177 1 1591 187 82 12 chr2 180842255 180842718 -69845136 - MER34 LTR ERV1 0 542 1 1853 151 10 0 chr2 180842982 180843273 -69844581 - AluJb SINE Alu -18 294 1 570 166 72 176 chr2 180843349 180843411 -69844443 + MER5B DNA MER1_type 4 71 -107 2731 136 34 5 chr2 180843411 180843823 -69844031 - MSTA LTR MaLR 0 428 5 570 166 72 176 chr2 180843823 180843953 -69843901 + MER5B DNA MER1_type 71 176 -2 476 227 121 0 chr2 180843953 180844094 -69843760 + MLT1L LTR MaLR 146 303 -312 242 263 241 29 chr2 180844215 180844352 -69843502 + MLT1L LTR MaLR 439 604 -11 1858 170 38 95 chr2 180844364 180844468 -69843386 + MER31A LTR ERV1 1 109 -376 2460 75 13 0 chr2 180844468 180844775 -69843079 - AluY SINE Alu 0 311 1 1858 170 38 95 chr2 180844775 180845176 -69842678 + MER31A LTR ERV1 109 477 -8 21 0 0 0 chr2 180846578 180846599 -69841255 + AT_rich Low_complexity Low_complexity 1 21 0 732 223 0 0 chr2 180846599 180846720 -69841134 - FLAM_C SINE Alu -12 121 1 281 218 89 20 chr2 180847763 180847864 -69839990 - MER113 DNA MER1_type? -408 113 6 235 300 17 0 chr2 180848587 180848647 -69839207 - MIR3 SINE MIR -15 193 133 308 232 211 0 chr2 180848763 180848858 -69838996 + MIR3 SINE MIR 81 195 -13 1004 203 6 28 chr2 180849887 180850069 -69837785 + MER45A DNA AcHobo 1 178 0 2197 105 0 7 chr2 180850976 180851272 -69836582 + AluSx SINE Alu 1 294 -18 558 138 11 0 chr2 180852095 180852182 -69835672 + MER67C LTR ERV1 7 94 -420 1231 159 10 5 chr2 180852182 180852390 -69835464 - AluJo SINE Alu -18 294 86 1672 177 48 59 chr2 180852391 180852848 -69835006 + MER67C LTR ERV1 91 512 -2 473 283 176 5 chr2 180853092 180853297 -69834557 - MIR SINE MIR -20 242 3 326 269 9 56 chr2 180854044 180854152 -69833702 + MIR SINE MIR 110 212 -50 8110 68 30 3 chr2 180857952 180858933 -69828921 + LTR13 LTR ERVK 1 1007 0 450 136 15 3 chr2 180859315 180859391 -69828463 + MSTD LTR MaLR 328 396 0 22 0 0 0 chr2 180860733 180860755 -69827099 + AT_rich Low_complexity Low_complexity 1 22 0 2096 105 6 59 chr2 180861694 180862017 -69825837 + AluSg1 SINE Alu 1 306 -3 198 309 18 0 chr2 180862698 180862753 -69825101 + L2 LINE L2 3202 3257 -56 258 129 16 65 chr2 180862759 180862821 -69825033 - FLAM_A SINE Alu 0 133 75 359 120 0 0 chr2 180863140 180863190 -69824664 - AluJ/FLAM SINE Alu -242 60 11 190 267 167 0 chr2 180863599 180863689 -69824165 + L2 LINE L2 3168 3272 0 201 373 25 8 chr2 180864418 180864536 -69823318 - L2 LINE L2 -642 2672 2553 260 281 62 0 chr2 180864836 180864900 -69822954 + L2 LINE L2 3204 3271 -1 475 239 106 56 chr2 180864902 180865082 -69822772 - MIR SINE MIR -47 215 27 1983 145 6 6 chr2 180865538 180865849 -69822005 - AluSx SINE Alu -1 311 1 275 178 0 0 chr2 180866592 180866637 -69821217 + L2 LINE L2 3251 3295 -18 291 231 10 67 chr2 180867762 180867866 -69819988 - LTR67 LTR ERVL -3 554 457 1996 109 10 55 chr2 180868008 180868319 -69819535 + AluSx SINE Alu 1 297 -15 1501 155 22 56 chr2 180868528 180868851 -69819003 - AluJb SINE Alu 0 312 1 225 313 182 19 chr2 180869042 180869410 -69818444 + L2 LINE L2 2430 2857 -457 1164 261 34 28 chr2 180869535 180869887 -69817967 + MLT1A2 LTR MaLR 21 374 0 1537 169 0 19 chr2 180869966 180870232 -69817622 - AluJo SINE Alu -23 289 29 190 351 68 20 chr2 180870426 180870574 -69817280 + L2 LINE L2 2906 3060 -212 457 323 58 77 chr2 180871057 180871422 -69816432 + L2 LINE L2 2906 3263 -9 297 75 0 0 chr2 180871422 180871462 -69816392 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 450 217 0 0 chr2 180871536 180871619 -69816235 + MER47B DNA MER2_type 1 83 -335 1408 154 23 0 chr2 180871636 180871857 -69815997 + MER47B DNA MER2_type 193 418 0 333 0 0 0 chr2 180872642 180872679 -69815175 + (TG)n Simple_repeat Simple_repeat 2 38 0 252 200 47 71 chr2 180873963 180874048 -69813806 - L2 LINE L2 -2 3270 3188 315 0 0 0 chr2 180874441 180874476 -69813378 + (TG)n Simple_repeat Simple_repeat 1 35 0 1981 179 18 0 chr2 180874802 180875138 -69812716 + L1ME4a LINE L1 5426 5767 -566 293 214 0 21 chr2 180875320 180875465 -69812389 + G-rich Low_complexity Low_complexity 1 142 0 4124 187 50 52 chr2 180875861 180876533 -69811321 + L1MC1 LINE L1 5426 6097 -236 1408 181 129 41 chr2 180876533 180876897 -69810957 - MSTD LTR MaLR 0 396 1 4124 187 50 52 chr2 180876897 180877129 -69810725 + L1MC1 LINE L1 6097 6328 -5 255 79 0 0 chr2 180877130 180877168 -69810686 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 1394 185 104 8 chr2 180877546 180877806 -69810048 - AluJb SINE Alu -25 287 3 322 254 94 7 chr2 180877922 180878060 -69809794 + L1ME4a LINE L1 5963 6112 -9 1924 152 3 7 chr2 180878220 180878239 -69809615 - AluJb SINE Alu 0 312 294 711 65 0 0 chr2 180878239 180878332 -69809522 + (TA)n Simple_repeat Simple_repeat 1 93 0 1924 152 3 7 chr2 180878332 180878621 -69809233 - AluJb SINE Alu -18 294 5 549 267 97 0 chr2 180879702 180879867 -69807987 - MIR SINE MIR -70 192 12 479 288 10 25 chr2 180880345 180880543 -69807311 - L1MC4a LINE L1 -1926 5882 5688 2400 106 3 0 chr2 180880718 180881029 -69806825 + AluSx SINE Alu 1 312 0 1611 165 34 73 chr2 180882811 180883193 -69804661 - MLT1A2 LTR MaLR 0 374 8 292 315 69 73 chr2 180883226 180883458 -69804396 + L2 LINE L2 3031 3261 -11 599 249 174 30 chr2 180883464 180883797 -69804057 - MLT1J2 LTR MaLR 0 450 70 321 321 131 7 chr2 180884021 180884158 -69803696 + MIR3 SINE MIR 21 174 -34 2334 110 0 0 chr2 180886369 180886677 -69801177 + AluSq SINE Alu 1 308 -5 2219 125 0 0 chr2 180887483 180887786 -69800068 + AluSc SINE Alu 1 303 -6 603 171 119 45 chr2 180888167 180888343 -69799511 - MER53 DNA DNA 0 189 1 2191 109 0 10 chr2 180889274 180889576 -69798278 + AluSq SINE Alu 5 303 -10 311 213 16 0 chr2 180889686 180889747 -69798107 + MER20B DNA MER1_type 6 67 -716 * 446 217 50 8 chr2 180889743 180889863 -69797991 + MER20B DNA MER1_type 545 669 -114 699 272 47 49 chr2 180889867 180890253 -69797601 + L1ME3 LINE L1 4650 5034 -1112 24 77 0 0 chr2 180890278 180890330 -69797524 + AT_rich Low_complexity Low_complexity 1 52 0 1036 278 59 32 chr2 180890352 180890905 -69796949 + L1ME3 LINE L1 5201 5856 -306 527 205 0 16 chr2 180891295 180891417 -69796437 + MER20B DNA MER1_type 664 783 0 2352 85 0 16 chr2 180891735 180892040 -69795814 - AluSc SINE Alu -9 300 1 303 294 92 33 chr2 180892222 180892375 -69795479 - MIR SINE MIR -43 219 58 2103 124 66 33 chr2 180892556 180892667 -69795187 - THE1C LTR MaLR 0 375 269 2410 81 0 3 chr2 180892667 180892975 -69794879 - AluY SINE Alu -4 307 1 2103 124 66 33 chr2 180892975 180893226 -69794628 - THE1C LTR MaLR -106 269 1 2195 136 0 0 chr2 180893336 180893638 -69794216 + AluSx SINE Alu 1 302 -10 335 287 36 60 chr2 180893984 180894151 -69793703 - L2 LINE L2 -672 2642 2480 1582 133 17 0 chr2 180894218 180894452 -69793402 + MSTB LTR MaLR 1 238 -188 2697 131 54 27 chr2 180895230 180895674 -69792180 - MSTB2 LTR MaLR -1 456 1 4051 232 66 99 chr2 180895674 180897305 -69790549 - MSTB2-int LTR MaLR 0 1580 3 2449 128 85 39 chr2 180897307 180897744 -69790110 - MSTB2 LTR MaLR 0 457 1 1703 179 7 7 chr2 180898984 180899274 -69788580 - AluJo SINE Alu -10 302 13 324 252 168 8 chr2 180899960 180900079 -69787775 + MIR SINE MIR 67 204 -58 603 221 8 39 chr2 180904553 180904680 -69783174 - FLAM_A SINE Alu -9 124 2 347 244 13 0 chr2 180905011 180905089 -69782765 + MER116 DNA Mariner 1 79 -1 3948 78 92 43 chr2 180907905 180908482 -69779372 + LTR14B LTR ERVK 4 608 0 435 307 47 8 chr2 180908572 180908741 -69779113 + MIR SINE MIR 8 180 -58 26 0 0 0 chr2 180908781 180908807 -69779047 + AT_rich Low_complexity Low_complexity 1 26 0 188 54 108 54 chr2 180908847 180908884 -69778970 - L3 LINE CR1 -2 1575 1537 274 297 81 55 chr2 180909440 180909676 -69778178 + L3 LINE CR1 536 777 -800 246 32 32 0 chr2 180909786 180909817 -69778037 + LTR14B LTR ERVK 577 608 0 243 333 65 26 chr2 180909923 180910076 -69777778 + MIR SINE MIR 21 179 -83 188 54 108 54 chr2 180910183 180910220 -69777634 - L3 LINE CR1 -2 1575 1537 727 307 175 42 chr2 180910776 180911684 -69776170 + L3 LINE CR1 536 1564 -13 21 0 0 0 chr2 180913739 180913760 -69774094 + AT_rich Low_complexity Low_complexity 1 21 0 411 145 0 0 chr2 180915809 180915878 -69771976 + (TA)n Simple_repeat Simple_repeat 2 70 0 23 0 0 0 chr2 180916051 180916074 -69771780 + AT_rich Low_complexity Low_complexity 1 23 0 252 200 214 0 chr2 180919363 180919433 -69768421 + MIR3 SINE MIR 118 202 -6 1638 183 6 46 chr2 180921011 180921334 -69766520 + AluJo SINE Alu 1 310 -2 4461 197 49 12 chr2 180922852 180924723 -69763131 - L1MD1 LINE L1 -142 6100 4159 207 0 0 0 chr2 180925876 180925899 -69761955 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 666 276 100 13 chr2 180925899 180926138 -69761716 - MIR SINE MIR -7 255 7 1552 182 3 26 chr2 180926415 180926717 -69761137 - AluJo SINE Alu -9 303 9 2497 65 0 3 chr2 180926753 180927060 -69760794 + AluSq SINE Alu 1 306 -7 300 245 45 103 chr2 180927142 180927297 -69760557 - L2 LINE L2 0 3313 3168 538 290 131 56 chr2 180927299 180927722 -69760132 - L2 LINE L2 -257 3056 2561 505 301 46 0 chr2 180927734 180927887 -69759967 - L2 LINE L2 -1075 2239 2080 31 44 0 0 chr2 180928420 180928465 -69759389 + AT_rich Low_complexity Low_complexity 1 45 0 2012 141 0 0 chr2 180928480 180928764 -69759090 - AluJb SINE Alu -28 284 1 416 323 96 26 chr2 180928861 180929090 -69758764 + MIR SINE MIR 15 259 -3 2020 115 0 0 chr2 180929412 180929690 -69758164 + AluSx SINE Alu 33 310 -2 654 267 68 28 chr2 180931074 180931325 -69756529 - L2 LINE L2 -1 3312 3052 491 286 93 22 chr2 180932520 180932702 -69755152 - MIR SINE MIR -3 259 65 2182 82 7 17 chr2 180933158 180933450 -69754404 + AluSx SINE Alu 1 289 -23 608 194 146 0 chr2 180933685 180933829 -69754025 + L1MA10 LINE L1 6170 6334 0 4037 76 3 26 chr2 180935610 180936177 -69751677 + MER41A LTR ERV1 1 554 0 2564 207 31 64 chr2 180937068 180937459 -69750395 + L1MC4a LINE L1 6848 7251 -557 2300 90 0 7 chr2 180937459 180937758 -69750096 - AluSq SINE Alu -16 297 1 2564 207 31 64 chr2 180937758 180938238 -69749616 + L1MC4a LINE L1 7251 7788 -20 21 36 0 0 chr2 180938657 180938685 -69749169 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 180939507 180939528 -69748326 + AT_rich Low_complexity Low_complexity 1 21 0 687 142 33 0 chr2 180939782 180939902 -69747952 - L1PA16 LINE L1 -9 6157 6034 207 222 19 0 chr2 180941227 180941281 -69746573 + A-rich Low_complexity Low_complexity 3 57 0 1716 164 11 0 chr2 180942518 180942827 -69745027 + AluJo SINE Alu 1 312 0 1299 157 0 14 chr2 180942848 180943058 -69744796 + AluJb SINE Alu 84 290 -22 27 73 0 0 chr2 180943707 180943762 -69744092 + AT_rich Low_complexity Low_complexity 1 55 0 297 315 81 61 chr2 180944234 180944512 -69743342 + L2 LINE L2 1954 2240 -1074 1596 189 11 7 chr2 180944512 180944817 -69743037 + AluJb SINE Alu 1 312 0 297 315 81 61 chr2 180944817 180944833 -69743021 + L2 LINE L2 2240 2254 -1060 1197 209 46 68 chr2 180945457 180945825 -69742029 + MLT1A1 LTR MaLR 6 365 0 2040 100 7 3 chr2 180946225 180946524 -69741330 - AluY SINE Alu -11 300 1 869 183 134 15 chr2 180946961 180947163 -69740691 + MER46A DNA MER2_type 1 226 -10 338 326 39 0 chr2 180948091 180948220 -69739634 + L2 LINE L2 3179 3312 -1 566 146 29 0 chr2 180949450 180949553 -69738301 + L1MA4 LINE L1 6184 6289 -11 1884 133 0 56 chr2 180953180 180953503 -69734351 + AluJb SINE Alu 1 305 -7 816 135 0 58 chr2 180953929 180954085 -69733769 + AluSg/x SINE Alu 163 309 -1 193 307 193 11 chr2 180954206 180954294 -69733560 - L2 LINE L2 0 3272 3169 326 356 145 12 chr2 180956112 180956519 -69731335 + L1 LINE L1 4242 4702 -1444 2279 92 0 31 chr2 180959482 180959799 -69728055 - AluSx SINE Alu -5 307 1 279 242 145 31 chr2 180959933 180960068 -69727786 + MIR SINE MIR 8 148 -62 230 324 0 0 chr2 180960613 180960681 -69727173 - L2 LINE L2 -593 2721 2654 328 316 133 49 chr2 180961401 180961686 -69726168 + L2 LINE L2 2422 2730 -584 222 347 28 0 chr2 180961895 180961967 -69725887 + L2 LINE L2 2982 3055 -217 1799 176 0 0 chr2 180963341 180963649 -69724205 + AluSx SINE Alu 5 312 0 396 261 80 83 chr2 180963737 180963846 -69724008 + L1MC4 LINE L1 7657 7765 -277 1868 102 36 69 chr2 180963846 180964151 -69723703 + AluSx SINE Alu 1 295 -17 396 261 80 83 chr2 180964151 180964269 -69723585 + L1MC4 LINE L1 7765 7882 -160 2225 111 7 0 chr2 180964269 180964575 -69723279 + AluSq SINE Alu 1 308 -5 396 261 80 83 chr2 180964575 180964733 -69723121 + L1MC4 LINE L1 7882 8042 0 27 29 0 0 chr2 180964927 180964961 -69722893 + AT_rich Low_complexity Low_complexity 1 34 0 2489 60 0 0 chr2 180966038 180966338 -69721516 + AluY SINE Alu 1 300 -11 2124 70 0 15 chr2 180966932 180967205 -69720649 + AluY SINE Alu 27 295 -16 2120 139 0 0 chr2 180969486 180969787 -69718067 - AluJb SINE Alu -11 301 1 1619 191 0 17 chr2 180970354 180970653 -69717201 + AluJo SINE Alu 1 294 -18 1990 136 0 7 chr2 180970776 180971078 -69716776 + AluSx SINE Alu 1 300 -12 628 291 67 29 chr2 180972280 180972490 -69715364 + LTR33 LTR ERVL 3 220 -301 24 32 0 0 chr2 180972620 180972651 -69715203 + AT_rich Low_complexity Low_complexity 1 31 0 225 159 0 0 chr2 180973179 180973223 -69714631 + (TA)n Simple_repeat Simple_repeat 2 45 0 188 0 74 0 chr2 180974019 180974046 -69713808 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 305 179 30 0 chr2 180974579 180974646 -69713208 - L1MB8 LINE L1 -2 6176 6108 44 0 0 0 chr2 180974646 180974690 -69713164 + AT_rich Low_complexity Low_complexity 1 44 0 4430 36 2 2 chr2 180974691 180975225 -69712629 - L1PA5 LINE L1 -9 6145 5612 2256 77 7 17 chr2 180975225 180975523 -69712331 - AluSp SINE Alu -18 295 1 2222 181 19 17 chr2 180975527 180976003 -69711851 - L1MB8 LINE L1 -63 6115 5639 1920 281 54 23 chr2 180976059 180976668 -69711186 + L1MB7 LINE L1 374 1001 -5858 1965 260 40 7 chr2 180976681 180977412 -69710442 + L1MB7 LINE L1 1563 2308 -4651 4072 238 56 24 chr2 180977674 180977766 -69710088 + L1MB7 LINE L1 2489 2577 -4380 1439 155 4 0 chr2 180977766 180977998 -69709856 - MER46A DNA MER2_type -3 233 1 4072 238 56 24 chr2 180977998 180979492 -69708362 + L1MB7 LINE L1 2577 4206 -2751 2065 183 53 42 chr2 180979482 180980012 -69707842 + L1MB7 LINE L1 6322 6857 -138 * 408 266 0 19 chr2 180980547 180980682 -69707172 + L1MC/D LINE L1 5701 5825 -340 2344 125 76 10 chr2 180980757 180981164 -69706690 + MER61C LTR ERV1 1 434 0 596 317 81 41 chr2 180983142 180983848 -69704006 + HAL1b LINE L1 37 770 -578 593 280 31 42 chr2 180984426 180984619 -69703235 - MIR SINE MIR -70 192 2 2225 122 0 22 chr2 180984680 180984999 -69702855 - AluSx SINE Alu 0 312 1 198 352 20 92 chr2 180985268 180985518 -69702336 + L2 LINE L2 2913 3144 -128 24 0 0 0 chr2 180985601 180985625 -69702229 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 180986646 180986674 -69701180 + AT_rich Low_complexity Low_complexity 1 28 0 201 211 35 70 chr2 180987344 180987401 -69700453 - MIR SINE MIR -3 259 205 504 301 64 23 chr2 180987854 180988196 -69699658 + L1ME4a LINE L1 5521 5876 -245 8606 152 54 61 chr2 180988285 180990053 -69697801 + MER52A LTR ERV1 1 1755 0 1577 193 41 0 chr2 180990126 180990396 -69697458 - AluJo SINE Alu -31 281 1 22 0 0 0 chr2 180990426 180990448 -69697406 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 180990892 180990913 -69696941 + AT_rich Low_complexity Low_complexity 1 21 0 2166 98 3 0 chr2 180991178 180991495 -69696359 + AluSq SINE Alu 1 318 0 583 287 66 0 chr2 180992019 180992200 -69695654 - MIR SINE MIR -6 256 64 1113 244 123 3 chr2 180992512 180992820 -69695034 + MER2 DNA MER2_type 1 345 0 2486 62 0 10 chr2 180992999 180993307 -69694547 - AluY SINE Alu -4 307 3 421 179 12 12 chr2 180994953 180995037 -69692817 - MIR SINE MIR -56 206 123 20154 82 12 2 chr2 180995091 180998667 -69689187 - L1PA7 LINE L1 -1 6153 2547 197 222 0 0 chr2 180999051 180999087 -69688767 + MIR SINE MIR 215 250 -12 741 234 7 0 chr2 180999234 180999379 -69688475 - FRAM SINE Alu -31 145 1 3158 246 98 53 chr2 180999735 180999824 -69688030 + L1ME1 LINE L1 37 121 -6094 827 143 0 50 chr2 180999824 180999964 -69687890 + FLAM_C SINE Alu 1 133 0 3158 246 98 53 chr2 180999964 181000306 -69687548 + L1ME1 LINE L1 121 446 -5769 1189 83 55 28 chr2 181000306 181000487 -69687367 + MER30B DNA MER1_type 1 186 -4 3158 246 98 53 chr2 181000487 181001431 -69686423 + L1ME1 LINE L1 446 1346 -4869 2142 88 40 10 chr2 181001431 181001727 -69686127 + AluSx SINE Alu 1 305 -7 3158 246 98 53 chr2 181001727 181001848 -69686006 + L1ME1 LINE L1 1346 1460 -4755 2010 127 7 7 chr2 181001848 181002148 -69685706 + AluSq SINE Alu 1 300 -13 3158 246 98 53 chr2 181002148 181003633 -69684221 + L1ME1 LINE L1 1460 3123 -3092 4267 190 73 48 chr2 181003676 181004162 -69683692 + L1ME1 LINE L1 3991 4463 -1772 1554 200 21 0 chr2 181004162 181004442 -69683412 + AluJo SINE Alu 1 286 -26 351 65 0 0 chr2 181004442 181004488 -69683366 + (TA)n Simple_repeat Simple_repeat 2 47 0 4267 190 73 48 chr2 181004488 181005315 -69682539 + L1ME1 LINE L1 4463 5268 -967 2331 82 0 0 chr2 181005315 181005608 -69682246 + AluY SINE Alu 1 293 -18 4267 190 73 48 chr2 181005608 181005725 -69682129 + L1ME1 LINE L1 5268 5381 -854 1642 189 0 13 chr2 181005725 181006031 -69681823 + AluJb SINE Alu 1 302 -10 4267 190 73 48 chr2 181006031 181006778 -69681076 + L1ME1 LINE L1 5381 6226 -9 683 296 28 73 chr2 181006809 181007096 -69680758 - L2 LINE L2 -853 2461 2188 643 185 52 7 chr2 181007136 181007271 -69680583 - MIR SINE MIR -45 217 77 22 56 0 0 chr2 181008164 181008200 -69679654 + AT_rich Low_complexity Low_complexity 1 36 0 260 324 91 17 chr2 181008692 181008920 -69678934 + L2 LINE L2 2565 2870 -444 2189 65 45 3 chr2 181009011 181009302 -69678552 + AluY SINE Alu 1 303 -8 347 327 55 9 chr2 181009591 181009701 -69678153 + L2 LINE L2 3158 3272 0 23 33 0 0 chr2 181009790 181009820 -69678034 + AT_rich Low_complexity Low_complexity 1 30 0 400 227 50 50 chr2 181010171 181010312 -69677542 + MIR SINE MIR 88 228 -34 181 326 20 31 chr2 181010845 181010943 -69676911 + MIR SINE MIR 116 212 -50 2412 97 0 0 chr2 181011003 181011313 -69676541 - AluSx SINE Alu -2 310 1 579 256 71 58 chr2 181011865 181012384 -69675470 + L1MC5 LINE L1 7268 7793 -168 1988 119 60 0 chr2 181012599 181012884 -69674970 - AluSx SINE Alu -8 304 3 24 77 0 0 chr2 181014343 181014395 -69673459 + AT_rich Low_complexity Low_complexity 1 52 0 2490 212 46 21 chr2 181014649 181015277 -69672577 - L1MC4a LINE L1 0 7808 7165 245 246 16 0 chr2 181015255 181015316 -69672538 + L1MC4a LINE L1 7212 7273 -535 * 388 125 25 25 chr2 181015332 181015412 -69672442 - L1MC4a LINE L1 -614 7194 7115 422 260 77 72 chr2 181016029 181016264 -69671590 + L2 LINE L2 3024 3259 -54 189 0 0 0 chr2 181016446 181016467 -69671387 + (TG)n Simple_repeat Simple_repeat 2 22 0 481 244 55 8 chr2 181017049 181017176 -69670678 - FLAM_A SINE Alu 0 133 1 23 0 0 0 chr2 181017674 181017697 -69670157 + AT_rich Low_complexity Low_complexity 1 23 0 2264 71 3 35 chr2 181019001 181019311 -69668543 + AluY SINE Alu 1 300 -11 378 291 62 45 chr2 181019447 181019654 -69668200 + MIR SINE MIR 41 250 -12 323 315 19 43 chr2 181019792 181019954 -69667900 - L2 LINE L2 -12 3301 3144 255 219 41 55 chr2 181020228 181020301 -69667553 - L2 LINE L2 -65 3207 3136 242 210 12 25 chr2 181020319 181020400 -69667454 + A-rich Low_complexity Low_complexity 3 82 0 258 32 0 0 chr2 181020422 181020453 -69667401 + (TA)n Simple_repeat Simple_repeat 1 31 0 222 200 67 78 chr2 181020725 181020815 -69667039 - MIR SINE MIR -80 182 94 1566 256 33 77 chr2 181021187 181022093 -69665761 + L1ME LINE L1 6 871 -5199 456 255 56 8 chr2 181022108 181022360 -69665494 - L1M4 LINE L1 -723 5447 5179 1902 117 89 31 chr2 181022379 181022739 -69665115 + MSTB1 LTR MaLR 23 403 -29 4009 85 38 10 chr2 181023400 181024403 -69663451 + MER11A LTR ERVK 1 1266 0 3562 269 36 54 chr2 181024650 181026305 -69661549 + L1P3 LINE L1 12 1635 -4826 298 345 77 30 chr2 181026556 181026791 -69661063 - MIR SINE MIR -15 247 2 21 36 0 0 chr2 181027322 181027350 -69660504 + AT_rich Low_complexity Low_complexity 1 28 0 1096 186 101 8 chr2 181027352 181027599 -69660255 - MSTA LTR MaLR 0 428 159 1963 133 0 18 chr2 181028496 181028806 -69659048 + AluSx SINE Alu 1 305 0 184 163 23 23 chr2 181028935 181028978 -69658876 + L2 LINE L2 3266 3308 -5 187 267 35 58 chr2 181029178 181029264 -69658590 + MIR3 SINE MIR 113 196 -12 2352 123 3 3 chr2 181029717 181030082 -69657772 - L1PB1 LINE L1 -2 6149 5785 21556 137 25 3 chr2 181030182 181033561 -69654293 + L1P4 LINE L1 1437 4923 -1245 2502 84 0 0 chr2 181033561 181033872 -69653982 - AluSp SINE Alu -2 311 1 21556 137 25 3 chr2 181033872 181034627 -69653227 + L1P4 LINE L1 4923 5660 -508 991 68 7 7 chr2 181034755 181034902 -69652952 + L1P4 LINE L1 5662 5808 -355 307 376 80 18 chr2 181035005 181035516 -69652338 + L2 LINE L2 1712 2254 -1060 415 233 17 9 chr2 181035526 181035642 -69652212 + MER103 DNA DNA 50 166 0 254 328 141 40 chr2 181035715 181035913 -69651941 + L2 LINE L2 3055 3272 0 188 276 176 45 chr2 181036263 181036462 -69651392 - L2 LINE L2 -658 2656 2432 181 244 0 0 chr2 181036581 181036626 -69651228 - L3 LINE CR1 -816 761 717 1701 174 3 37 chr2 181036898 181037196 -69650658 + AluJo SINE Alu 1 288 -24 350 243 10 19 chr2 181037416 181037519 -69650335 + MER103 DNA DNA 64 165 -1 333 0 0 0 chr2 181037841 181037878 -69649976 + (TG)n Simple_repeat Simple_repeat 2 38 0 27 0 0 0 chr2 181037901 181037928 -69649926 + AT_rich Low_complexity Low_complexity 1 27 0 216 314 34 82 chr2 181038117 181038324 -69649530 - L3 LINE CR1 -1169 408 212 204 313 212 10 chr2 181038485 181038584 -69649270 - MIR SINE MIR -71 137 19 2369 101 0 0 chr2 181039122 181039428 -69648426 - AluSq SINE Alu -7 306 1 3373 154 10 0 chr2 181039428 181040411 -69647443 - L1P5 LINE L1 -366 5785 4794 1681 169 14 27 chr2 181040418 181040713 -69647141 - AluJb SINE Alu -21 291 1 205 130 0 56 chr2 181041004 181041058 -69646796 + (TTTC)n Simple_repeat Simple_repeat 3 53 0 809 227 56 0 chr2 181041567 181041765 -69646089 - MER3 DNA MER1_type 0 209 1 1557 173 50 23 chr2 181041879 181042179 -69645675 + AluJb SINE Alu 1 308 -4 1154 162 30 17 chr2 181042515 181042750 -69645104 + L1PB4 LINE L1 5914 6151 -5 23 0 0 0 chr2 181042750 181042773 -69645081 + AT_rich Low_complexity Low_complexity 1 23 0 195 234 43 0 chr2 181043229 181043276 -69644578 - L3 LINE CR1 -5 1572 1524 374 278 135 15 chr2 181043473 181043606 -69644248 - MIR3 SINE MIR -56 152 4 230 203 31 16 chr2 181043801 181043865 -69643989 + L1ME4a LINE L1 5964 6028 -93 94 53 0 21 chr2 181043882 181044069 -69643785 + AT_rich Low_complexity Low_complexity 1 183 0 38 0 0 0 chr2 181044471 181044509 -69643345 + AT_rich Low_complexity Low_complexity 1 38 0 1337 165 5 0 chr2 181044509 181044715 -69643139 - AluJb SINE Alu -30 282 76 21 0 0 0 chr2 181044915 181044936 -69642918 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr2 181044955 181044992 -69642862 + (TG)n Simple_repeat Simple_repeat 2 38 0 862 92 54 0 chr2 181045339 181045469 -69642385 + MER85 DNA T2_type 1 137 -2 1868 176 10 0 chr2 181045965 181046260 -69641594 - AluJo SINE Alu -14 298 1 1999 142 7 3 chr2 181046625 181046921 -69640933 + AluJb SINE Alu 1 297 -15 278 213 194 19 chr2 181047527 181047635 -69640219 + L2 LINE L2 2324 2450 -864 371 250 0 0 chr2 181048230 181048310 -69639544 + MIR SINE MIR 124 203 -59 307 223 80 54 chr2 181048767 181048879 -69638975 + L2 LINE L2 3156 3270 -2 339 359 74 41 chr2 181049586 181050084 -69637770 + L2 LINE L2 2731 3272 0 247 349 23 23 chr2 181050394 181050523 -69637331 - L2 LINE L2 -616 2698 2570 681 109 20 0 chr2 181050528 181050629 -69637225 + FLAM_C SINE Alu 21 123 -20 201 386 33 17 chr2 181051145 181051386 -69636468 - L2 LINE L2 -2115 1199 955 2325 253 26 31 chr2 181052374 181052926 -69634928 + MER115 DNA AcHobo 53 603 -90 2477 81 0 3 chr2 181052926 181053233 -69634621 - AluY SINE Alu -5 306 1 2325 253 26 31 chr2 181053233 181053324 -69634530 + MER115 DNA AcHobo 603 693 0 847 147 0 22 chr2 181053841 181053977 -69633877 - FLAM_C SINE Alu 0 133 1 440 203 0 52 chr2 181054615 181054726 -69633128 + MER20 DNA MER1_type 112 219 0 306 319 0 11 chr2 181054930 181055021 -69632833 - MLT1I LTR MaLR -188 221 132 1958 149 7 3 chr2 181055093 181055382 -69632472 + AluJb SINE Alu 1 290 -22 4034 188 42 13 chr2 181055396 181056658 -69631196 - L1MB8 LINE L1 -53 6125 4828 506 301 30 12 chr2 181058167 181058333 -69629521 + MER5B DNA MER1_type 2 170 -8 2266 140 0 3 chr2 181058348 181058697 -69629157 - MER7A DNA MER2_type 0 346 1 236 274 88 0 chr2 181059003 181059105 -69628749 + MIR SINE MIR 108 218 -44 818 158 34 0 chr2 181059315 181059461 -69628393 - L1ME3A LINE L1 -1 6169 6019 470 238 166 20 chr2 181060196 181060347 -69627507 - MER5A DNA MER1_type -10 179 7 847 134 0 0 chr2 181060453 181060572 -69627282 - AluJb SINE Alu -193 119 1 203 267 0 0 chr2 181060576 181060621 -69627233 + L3 LINE CR1 1529 1573 -4 200 281 42 52 chr2 181060969 181061065 -69626789 + L3b LINE CR1 1163 1257 -326 878 191 25 0 chr2 181061616 181061773 -69626081 + AluJb SINE Alu 136 296 -16 442 176 28 34 chr2 181061783 181061959 -69625895 + GA-rich Low_complexity Low_complexity 2 176 0 478 236 17 22 chr2 181062508 181062686 -69625168 + GA-rich Low_complexity Low_complexity 3 179 0 1568 242 92 43 chr2 181062849 181063694 -69624160 - L1ME3A LINE L1 -10 6160 5209 2542 69 0 0 chr2 181063694 181064000 -69623854 - AluY SINE Alu -5 306 1 1568 242 92 43 chr2 181064000 181064204 -69623650 - L1ME3A LINE L1 -961 5209 5017 2075 137 16 44 chr2 181064374 181064421 -69623433 + THE1C LTR MaLR 1 48 -327 1905 93 33 40 chr2 181064421 181064723 -69623131 - AluSx SINE Alu -12 300 1 2075 137 16 44 chr2 181064723 181065061 -69622793 + THE1C LTR MaLR 48 375 0 2228 121 0 0 chr2 181065269 181065574 -69622280 - AluSg SINE Alu -5 305 1 1959 107 65 34 chr2 181065857 181066148 -69621706 + AluSx SINE Alu 1 300 -12 570 239 70 14 chr2 181066687 181066829 -69621025 - MIR SINE MIR -26 236 87 1639 139 131 0 chr2 181068263 181068530 -69619324 - AluJb SINE Alu -10 302 1 497 307 59 6 chr2 181069402 181069760 -69618094 + L1ME4a LINE L1 5581 5957 -164 260 273 13 13 chr2 181069783 181069860 -69617994 + HAL1 LINE L1 4 80 -2427 235 315 8 0 chr2 181070176 181070256 -69617598 + GA-rich Low_complexity Low_complexity 1 80 0 1507 178 4 14 chr2 181070290 181070565 -69617289 - AluJo SINE Alu -4 308 37 2159 114 3 7 chr2 181071047 181071354 -69616500 + AluSg SINE Alu 1 306 -4 1789 135 21 18 chr2 181071394 181071675 -69616179 - AluJo SINE Alu -30 282 1 1129 95 7 0 chr2 181072497 181072681 -69615173 - AluSg/x SINE Alu 0 317 133 858 129 8 0 chr2 181074086 181074210 -69613644 + FLAM_C SINE Alu 13 137 -6 3585 105 25 26 chr2 181074211 181074484 -69613370 + L1M1 LINE L1 2777 3049 -4516 2140 108 0 39 chr2 181074484 181074790 -69613064 + AluSx SINE Alu 1 294 -18 3585 105 25 26 chr2 181074790 181075087 -69612767 + L1M1 LINE L1 3049 3346 -4219 597 109 0 33 chr2 181075090 181075182 -69612672 + FLAM_C SINE Alu 55 143 0 2743 193 27 2 chr2 181075183 181075731 -69612123 + L1M1 LINE L1 3618 4179 -3386 478 167 0 0 chr2 181075751 181075817 -69612037 + AluS SINE Alu 2 67 -246 1568 193 50 40 chr2 181075822 181076200 -69611654 + L1ME3A LINE L1 5784 6165 -5 707 130 15 23 chr2 181076257 181076388 -69611466 - LTR37A LTR ERV1 0 426 297 588 193 0 9 chr2 181076826 181076935 -69610919 - L1ME LINE L1 -437 5684 5577 1962 113 25 0 chr2 181076935 181077248 -69610606 - AluSx SINE Alu 0 320 1 2127 96 7 0 chr2 181077797 181078114 -69609740 + AluY SINE Alu 1 319 0 283 165 71 71 chr2 181078151 181078236 -69609618 - L2 LINE L2 -5 3308 3224 3013 134 121 101 chr2 181078246 181078863 -69608991 - MER39 LTR ERV1 0 707 73 2022 148 10 0 chr2 181078863 181079167 -69608687 + AluSx SINE Alu 1 307 -5 3013 134 121 101 chr2 181079167 181079242 -69608612 - MER39 LTR ERV1 -634 73 1 769 161 35 21 chr2 181079345 181079488 -69608366 - FAM SINE Alu -4 45 1 228 310 172 9 chr2 181079503 181079619 -69608235 + L2 LINE L2 3115 3249 -23 2641 55 0 0 chr2 181080694 181081001 -69606853 - AluY SINE Alu -4 307 1 2214 192 31 22 chr2 181081675 181082129 -69605725 - MLT1C LTR MaLR -9 458 1 1603 157 77 7 chr2 181082325 181082612 -69605242 - AluJo SINE Alu -5 307 1 340 122 14 27 chr2 181083227 181083301 -69604553 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 699 262 99 0 chr2 181083391 181083582 -69604272 + MIR SINE MIR 20 229 -33 278 210 49 74 chr2 181083626 181083707 -69604147 + MIR SINE MIR 179 257 -5 884 246 23 9 chr2 181084304 181084519 -69603335 - MIR SINE MIR -26 236 19 458 297 125 61 chr2 181084546 181084768 -69603086 + L1MC4a LINE L1 5571 5820 -1988 2354 103 0 3 chr2 181084768 181085080 -69602774 + AluSx SINE Alu 1 311 -1 458 297 125 61 chr2 181085080 181085170 -69602684 + L1MC4a LINE L1 5820 5903 -1905 21 0 0 0 chr2 181085170 181085191 -69602663 + AT_rich Low_complexity Low_complexity 1 21 0 2138 136 0 0 chr2 181085236 181085530 -69602324 + AluSx SINE Alu 1 294 -18 200 207 52 0 chr2 181085707 181085765 -69602089 - MIR SINE MIR -71 191 131 816 163 7 0 chr2 181085902 181086037 -69601817 + MER5A DNA MER1_type 1 136 -53 1355 171 0 9 chr2 181086076 181086298 -69601556 - AluJo SINE Alu -92 220 1 413 164 0 0 chr2 181086299 181086360 -69601494 + MER5A DNA MER1_type 129 189 0 520 160 64 40 chr2 181086361 181086486 -69601368 - MER5B DNA MER1_type -13 165 38 185 250 131 24 chr2 181086978 181087062 -69600792 + L3 LINE CR1 565 657 -920 2027 131 3 0 chr2 181087170 181087481 -69600373 + AluSx SINE Alu 1 312 0 607 131 0 0 chr2 181087567 181087651 -69600203 - FLAM_C SINE Alu -33 110 27 965 281 63 46 chr2 181087754 181088167 -69599687 - L1M4 LINE L1 -2284 3862 3443 929 178 76 0 chr2 181088181 181088366 -69599488 - AluJo SINE Alu -2 310 112 305 193 72 24 chr2 181088381 181088464 -69599390 - L1M4 LINE L1 -3137 3009 2923 1025 261 137 8 chr2 181088470 181088980 -69598874 - L1M4 LINE L1 -3446 2700 2125 243 349 12 12 chr2 181088981 181089064 -69598790 + MIR SINE MIR 11 93 -169 21 0 0 0 chr2 181089862 181089883 -69597971 + AT_rich Low_complexity Low_complexity 1 21 0 1580 178 0 39 chr2 181089933 181090242 -69597612 + AluJb SINE Alu 1 297 -15 2539 161 26 61 chr2 181090273 181090333 -69597521 - Charlie1b DNA MER1_type -2238 523 462 1653 161 46 7 chr2 181090333 181090618 -69597236 + AluJo SINE Alu 1 296 -16 2539 161 26 61 chr2 181090618 181091097 -69596757 - Charlie1b DNA MER1_type -2299 462 3 229 184 126 126 chr2 181093874 181094048 -69593806 + L1MC5 LINE L1 7753 7926 -35 2059 130 7 3 chr2 181094076 181094368 -69593486 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr2 181094368 181094390 -69593464 + AT_rich Low_complexity Low_complexity 1 22 0 2179 201 50 92 chr2 181094989 181095555 -69592299 - MLT1F LTR MaLR 0 542 1 420 266 58 58 chr2 181098608 181098762 -69589092 + MER5B DNA MER1_type 1 154 -24 1101 189 22 0 chr2 181098764 181098949 -69588905 + MER5A DNA MER1_type 1 189 0 2008 152 3 0 chr2 181099082 181099392 -69588462 + AluSx SINE Alu 1 311 0 751 77 0 0 chr2 181099527 181099618 -69588236 + L1PA8 LINE L1 6 96 -6365 * 31960 99 11 13 chr2 181099616 181104738 -69583116 + L1PA8 LINE L1 670 5798 -689 2535 68 3 0 chr2 181104738 181105046 -69582808 + AluY SINE Alu 1 309 -2 31960 99 11 13 chr2 181105046 181105714 -69582140 + L1PA8 LINE L1 5798 6466 -21 180 0 0 0 chr2 181105997 181106017 -69581837 + (TC)n Simple_repeat Simple_repeat 1 20 0 198 0 0 0 chr2 181106177 181106199 -69581655 + (CA)n Simple_repeat Simple_repeat 1 22 0 189 0 0 0 chr2 181106478 181106499 -69581355 + (CA)n Simple_repeat Simple_repeat 1 21 0 198 0 0 0 chr2 181107589 181107611 -69580243 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 270 0 0 0 chr2 181107610 181107640 -69580214 + (CA)n Simple_repeat Simple_repeat 1 30 0 219 36 0 0 chr2 181107700 181107728 -69580126 + (CA)n Simple_repeat Simple_repeat 1 28 0 195 170 0 0 chr2 181107875 181107922 -69579932 + (CA)n Simple_repeat Simple_repeat 1 47 0 183 129 0 0 chr2 181108050 181108081 -69579773 + (CA)n Simple_repeat Simple_repeat 1 31 0 344 277 25 69 chr2 181108153 181108312 -69579542 + L2 LINE L2 2555 2706 -608 718 319 29 61 chr2 181108394 181108770 -69579084 + L2 LINE L2 2905 3268 -4 275 347 7 60 chr2 181109219 181109369 -69578485 + L2 LINE L2 3116 3257 -15 1510 186 45 14 chr2 181109856 181110146 -69577708 + AluJo SINE Alu 3 301 -11 257 271 73 56 chr2 181110146 181110256 -69577598 + MIR SINE MIR 7 118 -90 233 338 28 0 chr2 181110562 181110633 -69577221 + MIR SINE MIR 26 98 -110 531 283 64 5 chr2 181110654 181110841 -69577013 - MIR SINE MIR -12 250 53 466 152 0 0 chr2 181111018 181111084 -69576770 - AluJ/FRAM SINE Alu -18 294 229 864 150 0 0 chr2 181111084 181111211 -69576643 - AluJo/FLAM SINE Alu -185 127 1 666 190 65 110 chr2 181111217 181111445 -69576409 - L1MC5 LINE L1 -48 7913 7701 781 106 0 0 chr2 181111445 181111549 -69576305 + U13 snRNA snRNA 1 104 0 666 190 65 110 chr2 181111549 181111630 -69576224 - L1MC5 LINE L1 -260 7701 7618 2327 93 13 3 chr2 181111908 181112208 -69575646 + AluSq SINE Alu 1 303 -10 325 186 0 0 chr2 181112281 181112351 -69575503 - L1MA4 LINE L1 -5 6295 6226 180 0 0 0 chr2 181113349 181113369 -69574485 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1591 135 81 4 chr2 181113371 181113631 -69574223 - AluJb SINE Alu -32 280 1 45 0 0 0 chr2 181114078 181114123 -69573731 + AT_rich Low_complexity Low_complexity 1 45 0 336 310 82 74 chr2 181114299 181114689 -69573165 + MLT1K LTR MaLR 190 582 -6 359 332 118 68 chr2 181114880 181115347 -69572507 - L2 LINE L2 -455 2859 2370 181 148 0 148 chr2 181115939 181115993 -69571861 - L2 LINE L2 -78 3194 3149 657 203 63 10 chr2 181116165 181116269 -69571585 - MER33 DNA MER1_type -2263 322 225 3028 119 60 4 chr2 181116269 181116738 -69571116 - L1MC1 LINE L1 0 6333 5839 657 203 63 10 chr2 181116738 181116840 -69571014 - MER33 DNA MER1_type -2360 225 105 191 190 0 13 chr2 181116854 181116933 -69570921 + (TA)n Simple_repeat Simple_repeat 1 78 0 486 194 32 21 chr2 181116957 181117050 -69570804 - MER33 DNA MER1_type -229 95 2 231 114 0 0 chr2 181117608 181117643 -69570211 + (CA)n Simple_repeat Simple_repeat 1 35 0 452 285 126 73 chr2 181117790 181117993 -69569861 - ERVL LTR ERVL -1681 3973 3782 913 139 0 29 chr2 181117993 181118130 -69569724 - FLAM_C SINE Alu 0 133 1 452 285 126 73 chr2 181118130 181118496 -69569358 - ERVL LTR ERVL -1872 3782 3347 421 244 59 44 chr2 181118493 181118628 -69569226 - ERVL LTR ERVL -2731 3033 2897 * 373 326 40 13 chr2 181118654 181118856 -69568998 - ERVL LTR ERVL -2696 2789 2574 675 316 77 62 chr2 181119038 181119391 -69568463 - ERVL LTR ERVL -4048 1716 1370 821 127 32 16 chr2 181119391 181119517 -69568337 - FLAM_A SINE Alu -5 128 1 675 316 77 62 chr2 181119517 181119852 -69568002 - ERVL LTR ERVL -4394 1370 1018 2080 95 0 14 chr2 181119964 181120247 -69567607 - AluSx SINE Alu -32 280 2 306 301 48 34 chr2 181120992 181121138 -69566716 - LTR67 LTR ERVL 0 557 410 471 269 77 56 chr2 181121527 181121850 -69566004 - L1M4 LINE L1 -1310 4836 4507 345 373 75 6 chr2 181122328 181122489 -69565365 - MIR3 SINE MIR -21 187 16 348 280 34 68 chr2 181122975 181123093 -69564761 - L2 LINE L2 -6 3266 3153 304 270 162 17 chr2 181123231 181123367 -69564487 + MIR SINE MIR 16 171 -75 367 266 137 0 chr2 181124229 181124368 -69563486 - MER103 DNA DNA -1 165 8 21 0 0 0 chr2 181124969 181124990 -69562864 + AT_rich Low_complexity Low_complexity 1 21 0 1787 122 0 4 chr2 181125764 181126019 -69561835 + AluSx SINE Alu 1 254 -58 2376 100 0 0 chr2 181126189 181126488 -69561366 - AluSg SINE Alu -11 299 1 2067 125 27 0 chr2 181127124 181127419 -69560435 + AluSg SINE Alu 1 303 -7 2753 167 4 4 chr2 181127419 181127874 -69559980 + MER21B LTR ERV1 16 470 -393 2239 122 94 5 chr2 181127874 181128267 -69559587 - MSTA LTR MaLR 0 428 1 1371 205 59 36 chr2 181128268 181128624 -69559230 + MER21B LTR ERV1 467 830 -33 259 322 51 8 chr2 181128634 181128752 -69559102 + L2 LINE L2 211 333 -2981 1120 62 0 0 chr2 181128753 181128898 -69558956 - L1PA5 LINE L1 -4 6150 6006 1174 344 127 38 chr2 181128931 181129645 -69558209 + L2 LINE L2 719 1575 -1739 1559 141 65 0 chr2 181129645 181129922 -69557932 - AluSx SINE Alu -13 299 5 1174 344 127 38 chr2 181129922 181130352 -69557502 + L2 LINE L2 1575 1965 -1349 2250 113 28 28 chr2 181130461 181130860 -69556994 + L1PA11 LINE L1 5776 6174 0 263 221 87 40 chr2 181131241 181131390 -69556464 - L1MEd LINE L1 -5961 158 3 345 305 136 11 chr2 181131719 181131896 -69555958 + MIR SINE MIR 1 199 -63 235 302 66 112 chr2 181132143 181132385 -69555469 + LTR67 LTR ERVL 32 262 -295 204 40 0 0 chr2 181132784 181132809 -69555045 + (CA)n Simple_repeat Simple_repeat 1 25 0 422 226 99 17 chr2 181134059 181134240 -69553614 + L1MC5 LINE L1 7544 7739 -222 421 254 172 30 chr2 181137041 181137210 -69550644 - MIR3 SINE MIR -3 205 13 1796 105 19 4 chr2 181137328 181137665 -69550189 - Tigger4(Zombi) DNA MER2_type -1 2730 1 2045 115 0 21 chr2 181137972 181138285 -69549569 + AluSc SINE Alu 1 307 0 386 317 146 50 chr2 181139332 181139779 -69548075 + L1ME3A LINE L1 5460 5951 -211 21 0 0 0 chr2 181139805 181139826 -69548028 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr2 181139879 181139903 -69547951 + (CA)n Simple_repeat Simple_repeat 2 25 0 1550 175 37 17 chr2 181140298 181140595 -69547259 + AluJo SINE Alu 1 303 -9 3483 78 45 16 chr2 181141642 181142152 -69545702 + LTR17 LTR ERV1 256 780 0 4964 64 27 21 chr2 181142152 181142855 -69544999 + HERV17 LTR ERV1 1 707 -7919 9802 58 6 2 chr2 181143056 181144326 -69543528 + HERV17 LTR ERV1 2480 3754 -4872 4876 41 2 0 chr2 181144305 181144919 -69542935 + HERV17 LTR ERV1 5405 6019 -2607 * 268 77 0 0 chr2 181144912 181144951 -69542903 + HERV17 LTR ERV1 7510 7548 -1078 * 1925 84 32 7 chr2 181144941 181145226 -69542628 + HERV17 LTR ERV1 8335 8626 0 2018 106 12 27 chr2 181145226 181145555 -69542299 + LTR17 LTR ERV1 1 324 -456 263 241 115 23 chr2 181145774 181145861 -69541993 + MER5A DNA MER1_type 1 95 -94 1214 225 61 27 chr2 181146719 181147012 -69540842 + AluJo SINE Alu 2 304 -8 2078 163 79 25 chr2 181147090 181147494 -69540360 + MSTA LTR MaLR 3 428 0 615 296 28 0 chr2 181147577 181147753 -69540101 - MIR SINE MIR -48 214 34 242 292 141 16 chr2 181150808 181151000 -69536854 + L1ME LINE L1 5611 5826 -295 2405 103 0 0 chr2 181151715 181152025 -69535829 - AluSx SINE Alu -2 310 1 1033 268 117 42 chr2 181152445 181152855 -69534999 + L2 LINE L2 2873 3313 0 2268 96 0 16 chr2 181152954 181153266 -69534588 + AluSx SINE Alu 1 307 -5 196 281 41 99 chr2 181153267 181153388 -69534466 + MIR3 SINE MIR 49 162 -46 383 185 83 16 chr2 181153609 181153759 -69534095 - MER3 DNA MER1_type 0 209 4 22 0 0 0 chr2 181154572 181154594 -69533260 + AT_rich Low_complexity Low_complexity 1 22 0 1316 205 60 17 chr2 181154782 181155129 -69532725 + L1ME3A LINE L1 5736 6097 -73 490 310 66 14 chr2 181156248 181156461 -69531393 + MIR SINE MIR 8 231 -31 1840 156 3 16 chr2 181156746 181157054 -69530800 - AluJb SINE Alu -7 305 2 2110 121 7 3 chr2 181157564 181157871 -69529983 + AluSg SINE Alu 1 308 -2 264 316 0 32 chr2 181158089 181158184 -69529670 + L2 LINE L2 2549 2640 -674 194 304 18 0 chr2 181158300 181158356 -69529498 + L2 LINE L2 3200 3256 -16 186 274 161 0 chr2 181159315 181159377 -69528477 + L2 LINE L2 2578 2649 -665 605 265 122 39 chr2 181159394 181159624 -69528230 - MIR SINE MIR -6 256 8 226 277 53 11 chr2 181160219 181160313 -69527541 + MIR SINE MIR 119 216 -46 542 41 14 14 chr2 181160417 181160490 -69527364 + AluY SINE Alu 60 132 -179 620 232 58 37 chr2 181162494 181162684 -69525170 + MER58C DNA MER1_type 2 195 -20 299 317 142 0 chr2 181162874 181162994 -69524860 - MIR SINE MIR -48 214 78 200 384 0 47 chr2 181164175 181164261 -69523593 + L2 LINE L2 3096 3177 -95 335 195 13 13 chr2 181164389 181164479 -69523375 + AluSg/x SINE Alu 213 291 -9 344 62 0 0 chr2 181165163 181165211 -69522643 - MER85 DNA T2_type -2 137 90 583 111 22 0 chr2 181165256 181165346 -69522508 + AluSg/x SINE Alu 212 303 -6 192 77 0 0 chr2 181165358 181165384 -69522470 + (GGAA)n Simple_repeat Simple_repeat 1 26 0 783 204 94 0 chr2 181165427 181165608 -69522246 + MER3 DNA MER1_type 12 209 0 186 375 0 16 chr2 181166450 181166514 -69521340 - L2 LINE L2 -15 3257 3195 1865 249 53 79 chr2 181167078 181168533 -69519321 - L1ME3A LINE L1 -7 6163 4752 795 246 47 41 chr2 181168528 181168870 -69518984 - L1ME3A LINE L1 -1891 4255 3912 * 1261 126 6 0 chr2 181168871 181169046 -69518808 + AluSx SINE Alu 2 177 -135 610 237 50 61 chr2 181219664 181219862 -69467992 + MIR SINE MIR 42 237 -25 2218 105 0 7 chr2 181219997 181220293 -69467561 + AluSx SINE Alu 1 294 -18 255 280 40 13 chr2 181220477 181220552 -69467302 + MLT1J LTR MaLR 420 496 -15 1930 133 7 0 chr2 181220584 181220862 -69466992 - AluJb SINE Alu -32 280 1 449 299 109 0 chr2 181221139 181221286 -69466568 - MIR SINE MIR -94 168 6 2388 93 0 3 chr2 181221714 181222025 -69465829 - AluSx SINE Alu -2 310 1 323 218 39 26 chr2 181222053 181222131 -69465723 + MLT1J LTR MaLR 420 498 -13 268 260 39 26 chr2 181222169 181222246 -69465608 + MLT1J LTR MaLR 420 497 -14 255 280 40 13 chr2 181222285 181222360 -69465494 + MLT1J LTR MaLR 420 496 -15 1946 131 0 0 chr2 181222392 181222659 -69465195 - AluJb SINE Alu -32 280 14 288 250 25 99 chr2 181223545 181223708 -69464146 - MIR SINE MIR -15 193 42 890 48 0 0 chr2 181223737 181223841 -69464013 + MER30 DNA MER1_type 2 105 -125 325 68 120 0 chr2 181223841 181223958 -69463896 + (TA)n Simple_repeat Simple_repeat 2 132 0 27 0 0 0 chr2 181224003 181224030 -69463824 + AT_rich Low_complexity Low_complexity 1 27 0 469 169 13 0 chr2 181224033 181224110 -69463744 + MER30 DNA MER1_type 148 225 -5 672 126 39 0 chr2 181224561 181224664 -69463190 - AluY SINE Alu -22 289 183 1472 156 30 107 chr2 181224917 181225245 -69462609 - AluYb8 SINE Alu -15 303 1 2303 74 24 0 chr2 181225994 181226292 -69461562 + AluY SINE Alu 1 305 -6 293 170 277 0 chr2 181226574 181226686 -69461168 + Charlie4 DNA MER1_type 1 143 -1818 2358 81 7 0 chr2 181227144 181227440 -69460414 - AluY SINE Alu -13 298 1 1679 193 36 9 chr2 181228366 181228698 -69459156 - MER58B DNA MER1_type 0 341 1 626 189 5 111 chr2 181228771 181228855 -69458999 + MLT1J2 LTR MaLR 32 87 -363 1709 111 158 0 chr2 181228855 181229108 -69458746 - AluSg SINE Alu -15 295 3 626 189 5 111 chr2 181229108 181229213 -69458641 + MLT1J2 LTR MaLR 87 201 -249 423 196 21 0 chr2 181229265 181229362 -69458492 + MLT1J1 LTR MaLR 346 444 -2 1970 99 3 39 chr2 181229475 181229757 -69458097 - AluSq SINE Alu -3 310 39 31 0 0 0 chr2 181230211 181230242 -69457612 + AT_rich Low_complexity Low_complexity 1 31 0 340 349 6 12 chr2 181230549 181230715 -69457139 + L1M4 LINE L1 5178 5342 -804 3022 132 5 68 chr2 181231149 181231710 -69456144 - MER1A DNA MER1_type 0 529 4 898 216 40 0 chr2 181231769 181231991 -69455863 + L1MB4 LINE L1 5943 6173 -7 1944 152 0 3 chr2 181232209 181232506 -69455348 + AluSx SINE Alu 1 296 -16 2401 89 0 3 chr2 181232507 181232821 -69455033 + AluSq SINE Alu 1 313 0 2231 106 0 0 chr2 181233441 181233755 -69454099 - AluSx SINE Alu 0 314 1 541 252 96 66 chr2 181234685 181234950 -69452904 + L1MC5 LINE L1 6857 7113 -905 369 0 0 0 chr2 181234950 181234991 -69452863 + (TG)n Simple_repeat Simple_repeat 2 42 0 541 252 96 66 chr2 181234991 181235442 -69452412 + L1MC5 LINE L1 7113 7493 -525 709 132 0 9 chr2 181235495 181235609 -69452245 - MER39 LTR ERV1 -13 694 582 222 328 16 49 chr2 181235877 181235999 -69451855 + MER5A DNA MER1_type 41 158 -31 22 35 0 0 chr2 181236218 181236247 -69451607 + AT_rich Low_complexity Low_complexity 1 29 0 1192 141 0 31 chr2 181236251 181236442 -69451412 + AluJo SINE Alu 105 289 -23 277 274 32 0 chr2 181236646 181236708 -69451146 - L2 LINE L2 -8 3305 3242 516 196 21 0 chr2 181236763 181236860 -69450994 + MER5A DNA MER1_type 7 105 -84 316 256 12 23 chr2 181237810 181237896 -69449958 - MIR SINE MIR -131 131 47 202 150 25 0 chr2 181239088 181239128 -69448726 + T-rich Low_complexity Low_complexity 5 45 0 391 234 255 7 chr2 181239586 181239731 -69448123 + MER5A DNA MER1_type 9 189 0 956 196 56 0 chr2 181239737 181239916 -69447938 - MER5A DNA MER1_type 0 189 1 1117 130 6 0 chr2 181239970 181240139 -69447715 - AluSp SINE Alu -2 311 142 24 32 0 0 chr2 181241617 181241648 -69446206 + AT_rich Low_complexity Low_complexity 1 31 0 201 296 313 14 chr2 181241766 181242127 -69445727 - L2 LINE L2 0 3313 2845 588 261 261 3 chr2 181242742 181243049 -69444805 - L2 LINE L2 -623 2691 2306 964 51 0 0 chr2 181243308 181243426 -69444428 - AluY SINE Alu -11 300 183 183 277 0 0 chr2 181243487 181243534 -69444320 + MIR SINE MIR 213 259 -3 1125 159 6 0 chr2 181243678 181243854 -69444000 - AluSx SINE Alu -15 297 121 189 0 0 0 chr2 181243854 181243875 -69443979 + (T)n Simple_repeat Simple_repeat 1 21 0 294 299 0 0 chr2 181243875 181243962 -69443892 - AluSx SINE Alu -169 133 47 492 312 23 12 chr2 181244437 181244610 -69443244 - MIR SINE MIR -76 186 12 618 247 48 17 chr2 181244804 181245035 -69442819 - L1ME3A LINE L1 -228 5942 5705 626 319 10 29 chr2 181245623 181245830 -69442024 + MIR SINE MIR 1 203 -59 21 57 0 0 chr2 181249135 181249170 -69438684 + AT_rich Low_complexity Low_complexity 1 35 0 291 54 0 0 chr2 181250057 181250094 -69437760 + (TG)n Simple_repeat Simple_repeat 2 38 0 224 157 20 0 chr2 181252209 181252260 -69435594 + (TATAA)n Simple_repeat Simple_repeat 3 54 0 247 154 0 0 chr2 181252297 181252336 -69435518 + MER57A LTR ERV1 295 333 -70 294 297 203 7 chr2 181253019 181253167 -69434687 - L3b LINE CR1 -301 1282 1106 237 226 48 60 chr2 181253238 181253322 -69434532 - L2 LINE L2 -2 3311 3229 229 258 103 0 chr2 181254254 181254351 -69433503 - L1ME4a LINE L1 -30 6091 5985 369 249 103 63 chr2 181255029 181255407 -69432447 - L1ME4a LINE L1 -57 6064 5672 24 0 0 0 chr2 181255548 181255572 -69432282 + AT_rich Low_complexity Low_complexity 1 24 0 2353 82 7 0 chr2 181256127 181256418 -69431436 + AluSx SINE Alu 1 293 -19 907 232 79 21 chr2 181256897 181257138 -69430716 + MIR SINE MIR 3 257 -5 277 229 66 0 chr2 181257150 181257211 -69430643 - L2 LINE L2 -7 3265 3201 919 198 0 6 chr2 181257228 181257400 -69430454 - AluJb SINE Alu -1 311 141 1258 310 31 5 chr2 181257766 181258153 -69429701 + L2 LINE L2 2374 2770 -544 383 171 38 194 chr2 181258938 181259149 -69428705 + MER5B DNA MER1_type 1 178 0 369 267 173 20 chr2 181259240 181259390 -69428464 - MER5A DNA MER1_type 0 189 17 748 307 52 4 chr2 181259423 181259654 -69428200 - MIR SINE MIR -17 245 4 308 360 91 62 chr2 181260011 181260464 -69427390 + L2 LINE L2 2807 3272 0 593 217 164 20 chr2 181260517 181260669 -69427185 + MER5B DNA MER1_type 2 175 -3 1419 153 52 4 chr2 181261495 181261744 -69426110 - AluJb SINE Alu -51 261 1 544 170 0 75 chr2 181261839 181261945 -69425909 + AluJo SINE Alu 30 127 -185 408 299 39 20 chr2 181262179 181262383 -69425471 - MLT1I LTR MaLR -201 208 1 1665 160 0 35 chr2 181262812 181263099 -69424755 - AluJb SINE Alu -30 282 6 556 193 180 0 chr2 181263388 181263538 -69424316 + MER3 DNA MER1_type 2 131 -78 1988 148 0 16 chr2 181265302 181265607 -69422247 - AluSx SINE Alu -12 300 1 937 154 41 30 chr2 181265807 181265976 -69421878 + AluJo SINE Alu 137 307 -5 1542 156 18 0 chr2 181265994 181266276 -69421578 + L1MA6 LINE L1 6013 6299 -1 385 253 177 21 chr2 181266335 181266521 -69421333 + MIR SINE MIR 31 245 -17 2458 69 0 7 chr2 181266551 181266857 -69420997 - AluY SINE Alu -7 304 1 972 55 0 0 chr2 181266857 181266967 -69420887 - AluSg SINE Alu -176 134 25 423 0 0 0 chr2 181266967 181267014 -69420840 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2113 106 0 3 chr2 181267017 181267299 -69420555 - AluSq SINE Alu -32 281 1 273 235 15 29 chr2 181268339 181268407 -69419447 + MIR3 SINE MIR 140 206 -2 381 300 39 23 chr2 181268777 181268907 -69418947 + MIR3 SINE MIR 62 193 -15 202 185 19 37 chr2 181269364 181269418 -69418436 + CT-rich Low_complexity Low_complexity 3 55 0 719 134 0 0 chr2 181269768 181269880 -69417974 + HY1 scRNA scRNA 1 112 0 2162 122 3 0 chr2 181270460 181270747 -69417107 + AluSx SINE Alu 1 288 -24 21 0 0 0 chr2 181271122 181271143 -69416711 + AT_rich Low_complexity Low_complexity 1 21 0 1735 149 7 18 chr2 181271283 181271392 -69416462 + AluSx SINE Alu 26 135 -177 2205 139 0 0 chr2 181271392 181271701 -69416153 + AluSg SINE Alu 2 310 0 1735 149 7 18 chr2 181271701 181271866 -69415988 + AluSx SINE Alu 135 297 -15 1139 68 0 0 chr2 181272153 181272286 -69415568 + AluSq/x SINE Alu 1 133 -179 1608 107 0 0 chr2 181272288 181272494 -69415360 + AluSx SINE Alu 1 206 -106 949 94 0 0 chr2 181272597 181272714 -69415140 - AluY SINE Alu -194 117 1 24 53 0 0 chr2 181274013 181274051 -69413803 + AT_rich Low_complexity Low_complexity 1 38 0 1399 171 110 0 chr2 181274566 181274830 -69413024 - AluJo SINE Alu -19 293 1 2347 95 0 3 chr2 181278994 181279299 -69408555 + AluY SINE Alu 1 304 -7 1146 232 32 0 chr2 181279718 181279968 -69407886 - AluJo SINE Alu -30 282 25 261 268 0 12 chr2 181280395 181280477 -69407377 + (CCA)n Simple_repeat Simple_repeat 1 81 0 249 196 71 0 chr2 181280965 181281021 -69406833 + L1ME3A LINE L1 6020 6079 -91 2528 50 0 0 chr2 181281987 181282290 -69405564 - AluY SINE Alu -8 303 1 190 329 82 68 chr2 181284905 181285051 -69402803 + MIR3 SINE MIR 56 203 -5 2085 129 0 19 chr2 181285971 181286280 -69401574 + AluSx SINE Alu 1 303 -9 2002 39 0 39 chr2 181286280 181286535 -69401319 + AluY SINE Alu 1 245 -66 2287 102 3 0 chr2 181286535 181286837 -69401017 + AluSx SINE Alu 1 304 -8 1147 124 0 6 chr2 181287327 181287488 -69400366 - AluSg/x SINE Alu -18 291 132 2092 134 0 7 chr2 181287488 181287793 -69400061 - AluSx SINE Alu -9 303 1 2273 72 0 4 chr2 181287809 181288088 -69399766 - AluSc SINE Alu -16 293 16 309 219 27 27 chr2 181288407 181288480 -69399374 - L2 LINE L2 -2 3311 3239 1801 132 76 25 chr2 181288886 181289243 -69398611 + THE1C LTR MaLR 1 375 0 937 195 12 0 chr2 181289243 181289412 -69398442 - MER45A DNA AcHobo -3 175 5 1337 124 0 0 chr2 181289706 181289884 -69397970 - AluSg/x SINE Alu -10 302 125 2289 99 0 7 chr2 181289885 181290189 -69397665 - AluSq SINE Alu -11 302 1 289 127 0 18 chr2 181290600 181290655 -69397199 + Alu SINE Alu 243 296 -6 288 310 69 9 chr2 181290771 181290887 -69396967 - MIR SINE MIR -118 144 22 2278 88 14 0 chr2 181291120 181291405 -69396449 + AluSc SINE Alu 1 289 -20 1011 161 0 0 chr2 181291413 181291593 -69396261 + (TA)n Simple_repeat Simple_repeat 1 180 0 595 59 59 24 chr2 181292458 181292627 -69395227 + (TA)n Simple_repeat Simple_repeat 2 176 0 22 0 0 0 chr2 181292631 181292653 -69395201 + AT_rich Low_complexity Low_complexity 1 22 0 384 255 35 64 chr2 181292659 181292800 -69395054 + L1MC4 LINE L1 6614 6750 -1292 297 0 0 0 chr2 181293100 181293133 -69394721 + (CA)n Simple_repeat Simple_repeat 2 34 0 2310 183 9 13 chr2 181293198 181293651 -69394203 - MER49 LTR ERV1 0 923 473 1478 181 20 16 chr2 181293652 181293906 -69393948 + AluJb SINE Alu 20 274 -38 2406 24 0 0 chr2 181293907 181294205 -69393649 - L1P LINE L1 -977 5169 4872 197 184 26 0 chr2 181294305 181294343 -69393511 - L3 LINE CR1 -1141 436 398 356 262 0 66 chr2 181294717 181294839 -69393015 + L2 LINE L2 3199 3312 -1 626 160 19 186 chr2 181295006 181295121 -69392733 - MLT1K LTR MaLR 0 588 554 1925 177 0 0 chr2 181295121 181295426 -69392428 + AluJb SINE Alu 1 305 -7 626 160 19 186 chr2 181295426 181295617 -69392237 - MLT1K LTR MaLR -34 554 333 2255 97 3 16 chr2 181296090 181296399 -69391455 + AluY SINE Alu 1 305 -6 182 363 0 25 chr2 181296468 181296548 -69391306 + L3 LINE CR1 218 295 -1282 24 0 0 0 chr2 181296843 181296867 -69390987 + AT_rich Low_complexity Low_complexity 1 24 0 1490 216 0 3 chr2 181298660 181298991 -69388863 - AluJb SINE Alu 0 330 1 22 35 0 0 chr2 181299049 181299078 -69388776 + AT_rich Low_complexity Low_complexity 1 29 0 2395 88 0 0 chr2 181299427 181299724 -69388130 - AluY SINE Alu -14 297 1 1530 196 63 0 chr2 181299792 181300063 -69387791 - AluJb SINE Alu -24 288 1 2397 92 83 0 chr2 181300094 181300430 -69387424 - THE1B LTR MaLR 0 364 1 1017 107 0 0 chr2 181300499 181300630 -69387224 + AluSq/x SINE Alu 1 131 -181 606 161 25 87 chr2 181300730 181300782 -69387072 - MER33 DNA MER1_type -2416 169 115 1715 183 0 10 chr2 181300782 181301083 -69386771 - AluJo SINE Alu -10 302 5 606 161 25 87 chr2 181301083 181301191 -69386663 - MER33 DNA MER1_type -2470 115 19 21 57 0 0 chr2 181301281 181301316 -69386538 + AT_rich Low_complexity Low_complexity 1 35 0 1008 163 33 5 chr2 181301369 181301553 -69386301 + MER5A DNA MER1_type 1 189 0 996 133 20 27 chr2 181302788 181303033 -69384821 + MER33 DNA MER1_type 1 324 0 1398 276 48 18 chr2 181303599 181304164 -69383690 - L1ME3A LINE L1 -213 5940 5359 756 283 80 14 chr2 181304175 181304674 -69383180 - L1ME3A LINE L1 -818 5311 4780 2291 259 83 42 chr2 181304714 181305393 -69382461 - L1ME3A LINE L1 -1625 4504 3854 213 94 0 0 chr2 181305393 181305425 -69382429 + (TG)n Simple_repeat Simple_repeat 2 33 0 2291 259 83 42 chr2 181305425 181306426 -69381428 - L1ME3A LINE L1 -2275 3854 2756 252 104 82 22 chr2 181306465 181306600 -69381254 + (TA)n Simple_repeat Simple_repeat 2 144 0 1502 146 121 14 chr2 181306689 181306969 -69380885 + AluSg SINE Alu 1 310 0 304 271 91 61 chr2 181307006 181307684 -69380170 - L1MEd LINE L1 -3489 2640 1981 649 254 93 31 chr2 181307874 181308351 -69379503 - L1MEd LINE L1 -4656 1654 1119 480 230 178 66 chr2 181308399 181308747 -69379107 + MLT1J2 LTR MaLR 64 450 0 356 195 0 0 chr2 181308760 181308842 -69379012 - L1MB8 LINE L1 -4 6174 6093 3163 174 53 45 chr2 181308861 181309425 -69378429 - L1MB4 LINE L1 -6 6174 5601 2376 87 3 0 chr2 181309425 181309724 -69378130 - AluSp SINE Alu -13 300 1 3163 174 53 45 chr2 181309724 181309939 -69377915 - L1MB4 LINE L1 -579 5601 5389 404 105 78 13 chr2 181309956 181310073 -69377781 - L1MB8 LINE L1 -740 5411 5322 503 191 0 0 chr2 181310079 181310168 -69377686 - AluJb SINE Alu -17 295 207 554 200 30 45 chr2 181310169 181310369 -69377485 - L1MB4 LINE L1 -816 5330 5134 668 264 178 74 chr2 181310414 181311346 -69376508 - L1MEd LINE L1 -5081 1038 10 190 339 15 0 chr2 181311565 181311630 -69376224 + L2 LINE L2 3207 3272 0 499 254 148 18 chr2 181311848 181312017 -69375837 + MIR SINE MIR 44 234 -28 2357 85 0 7 chr2 181312523 181312817 -69375037 - AluSq SINE Alu -21 292 1 360 0 0 0 chr2 181312880 181312920 -69374934 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 186 71 0 0 chr2 181313116 181313144 -69374710 + (CAAAAA)n Simple_repeat Simple_repeat 4 31 0 300 260 0 14 chr2 181313590 181313663 -69374191 + GA-rich Low_complexity Low_complexity 2 73 0 397 191 124 0 chr2 181314136 181314225 -69373629 - MER63 DNA MER1_type -102 734 9 2233 93 3 42 chr2 181314340 181314650 -69373204 - AluSx SINE Alu -14 298 1 23 0 0 0 chr2 181314803 181314826 -69373028 + AT_rich Low_complexity Low_complexity 1 23 0 1170 191 3 62 chr2 181315524 181315824 -69372030 - MLT1A2 LTR MaLR 0 374 93 623 190 89 0 chr2 181315824 181315982 -69371872 - LTR54B LTR ERV1 -2 496 325 23 54 0 0 chr2 181315985 181316022 -69371832 + AT_rich Low_complexity Low_complexity 1 37 0 704 186 0 0 chr2 181316022 181316140 -69371714 - AluJb SINE Alu -194 118 1 910 133 137 44 chr2 181316157 181316405 -69371449 - LTR54B LTR ERV1 -188 310 40 240 105 0 0 chr2 181316949 181316987 -69370867 - LTR54 LTR ERV1 -472 38 1 * 521 136 34 42 chr2 181316987 181317078 -69370776 - MLT1A2 LTR MaLR -284 90 1 427 260 192 34 chr2 181318779 181319102 -69368752 + MLT1J LTR MaLR 61 434 -77 637 278 105 34 chr2 181319109 181319127 -69368727 - MLT1I LTR MaLR -57 352 337 2168 107 35 0 chr2 181319127 181319416 -69368438 - AluSg SINE Alu -10 300 2 637 278 105 34 chr2 181319416 181319721 -69368133 - MLT1I LTR MaLR -72 337 6 365 194 0 0 chr2 181319722 181319794 -69368060 + MLT1J LTR MaLR 436 507 -4 279 314 110 8 chr2 181320226 181320344 -69367510 + L2 LINE L2 1781 1910 -1404 2588 33 0 3 chr2 181320609 181320915 -69366939 - AluY SINE Alu -6 305 1 24 0 0 0 chr2 181326215 181326239 -69361615 + AT_rich Low_complexity Low_complexity 1 24 0 1272 112 0 17 chr2 181326873 181327052 -69360802 + AluSg/x SINE Alu 120 295 -17 2358 105 0 6 chr2 181327917 181328230 -69359624 + AluSq SINE Alu 1 311 -2 31 26 0 0 chr2 181328518 181328556 -69359298 + AT_rich Low_complexity Low_complexity 1 38 0 2111 139 0 13 chr2 181330040 181330356 -69357498 - AluJo SINE Alu 0 312 1 2322 95 0 0 chr2 181330569 181330865 -69356989 - AluSg SINE Alu -14 296 1 2237 101 3 0 chr2 181330903 181331201 -69356653 - AluSx SINE Alu -13 299 1 688 146 73 8 chr2 181331520 181331643 -69356211 + FLAM_C SINE Alu 1 131 -12 1861 154 20 17 chr2 181331675 181331974 -69355880 + AluJo SINE Alu 13 312 0 1922 152 16 10 chr2 181332458 181332768 -69355086 - AluSq SINE Alu -1 312 1 1558 170 46 42 chr2 181332816 181333122 -69354732 + AluJb SINE Alu 5 311 -1 519 55 0 0 chr2 181333451 181333524 -69354330 - MER41B LTR ERV1 -86 549 477 1697 169 0 0 chr2 181334410 181334670 -69353184 + AluJb SINE Alu 36 295 -17 249 269 90 0 chr2 181334880 181334947 -69352907 - MIR SINE MIR -112 150 78 858 250 14 23 chr2 181335055 181335271 -69352583 - MIR SINE MIR -45 217 4 2269 155 31 10 chr2 181335465 181335851 -69352003 - MSTD LTR MaLR -2 394 1 22 35 0 0 chr2 181337397 181337426 -69350428 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 181337711 181337732 -69350122 + AT_rich Low_complexity Low_complexity 1 21 0 1865 155 38 0 chr2 181338268 181338559 -69349295 + AluJb SINE Alu 1 302 -10 889 144 0 26 chr2 181338560 181338713 -69349141 + AluY SINE Alu 2 150 -161 3224 138 50 0 chr2 181338970 181339471 -69348383 + MER1A DNA MER1_type 1 526 -1 407 200 56 0 chr2 181340231 181340356 -69347498 - L1ME4a LINE L1 -199 5922 5791 308 346 101 31 chr2 181340505 181340664 -69347190 + L2 LINE L2 2618 2787 -527 2430 92 0 13 chr2 181340971 181341286 -69346568 - AluSp SINE Alu -2 311 1 207 0 0 0 chr2 181341379 181341402 -69346452 + (TG)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr2 181341536 181341564 -69346290 + AT_rich Low_complexity Low_complexity 1 28 0 268 300 75 25 chr2 181342019 181342139 -69345715 + MIR3 SINE MIR 78 203 -5 1991 137 3 27 chr2 181342185 181342485 -69345369 + AluJo SINE Alu 1 293 -19 1750 166 22 0 chr2 181342516 181342820 -69345034 - AluJb SINE Alu 0 310 1 484 295 175 20 chr2 181342910 181343129 -69344725 + MIR SINE MIR 8 256 -6 229 198 22 44 chr2 181343591 181343682 -69344172 + (TATAA)n Simple_repeat Simple_repeat 3 91 0 878 134 49 109 chr2 181343689 181343776 -69344078 - ORSL DNA AcHobo -2 273 182 1906 128 0 44 chr2 181343776 181344099 -69343755 - AluSx SINE Alu 0 310 1 878 134 49 109 chr2 181344099 181344257 -69343597 - ORSL DNA AcHobo -93 182 42 27 0 0 0 chr2 181344466 181344493 -69343361 + AT_rich Low_complexity Low_complexity 1 27 0 674 174 0 22 chr2 181344493 181344631 -69343223 - L1MA3 LINE L1 0 6305 6171 1260 142 90 0 chr2 181344995 181345206 -69342648 - MER30 DNA MER1_type 0 230 1 980 288 8 8 chr2 181345540 181345790 -69342064 - MIR SINE MIR 0 262 13 1445 168 70 65 chr2 181345844 181346214 -69341640 + MLT1B LTR MaLR 1 372 -18 21 0 0 0 chr2 181347038 181347059 -69340795 + AT_rich Low_complexity Low_complexity 1 21 0 1845 152 7 7 chr2 181347122 181347412 -69340442 + AluJo SINE Alu 1 290 -22 1802 179 42 3 chr2 181347559 181347912 -69339942 + MSTB1 LTR MaLR 5 371 -61 378 255 120 32 chr2 181350260 181350374 -69337480 - MER5A DNA MER1_type -15 167 41 1813 171 0 10 chr2 181350374 181350667 -69337187 + AluJb SINE Alu 7 296 -16 378 255 120 32 chr2 181350667 181350712 -69337142 - MER5A DNA MER1_type -141 41 1 2042 101 4 4 chr2 181350744 181351020 -69336834 + AluSx SINE Alu 1 276 -36 2261 83 21 3 chr2 181351021 181351310 -69336544 + AluY SINE Alu 2 295 -16 196 284 128 29 chr2 181352185 181352287 -69335567 + MIR SINE MIR 81 192 -70 2134 100 3 63 chr2 181352338 181352657 -69335197 + AluSp SINE Alu 1 300 -13 2199 81 0 27 chr2 181353154 181353472 -69334382 - AluY SINE Alu 0 310 1 1436 172 64 108 chr2 181354468 181354903 -69332951 + MLT1C LTR MaLR 52 467 0 42 20 0 0 chr2 181355792 181355841 -69332013 + AT_rich Low_complexity Low_complexity 1 49 0 694 288 40 14 chr2 181356041 181356263 -69331591 - MIR SINE MIR -26 236 9 1508 269 76 25 chr2 181356759 181357271 -69330583 + MLT1H1 LTR MaLR 17 554 -1 192 340 20 60 chr2 181357473 181357573 -69330281 + MIR3 SINE MIR 7 102 -106 232 292 31 0 chr2 181357791 181357856 -69329998 + L2 LINE L2 3244 3310 -3 1724 156 33 4 chr2 181359015 181359317 -69328537 + AluJb SINE Alu 2 311 0 344 277 202 37 chr2 181359358 181359546 -69328308 + MIR SINE MIR 2 220 -42 1706 188 72 16 chr2 181359713 181360145 -69327709 + Charlie4a DNA MER1_type 36 491 -17 331 172 192 10 chr2 181360714 181360813 -69327041 - Charlie2a DNA MER1_type -7 2855 2739 874 197 0 5 chr2 181360846 181361034 -69326820 - Charlie2a DNA MER1_type -1201 1661 1475 224 283 0 0 chr2 181361078 181361131 -69326723 + GA-rich Low_complexity Low_complexity 3 55 0 373 227 145 110 chr2 181361233 181361515 -69326339 - Charlie2a DNA MER1_type -2570 292 1 207 0 0 0 chr2 181361825 181361848 -69326006 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 4735 71 2 2 chr2 181362435 181363053 -69324801 - L1PA10 LINE L1 0 6168 5551 449 257 61 86 chr2 181364310 181364555 -69323299 + MER102b DNA MER1_type 103 341 0 1330 216 46 38 chr2 181364729 181365144 -69322710 + MER39 LTR ERV1 91 707 0 465 281 117 20 chr2 181365713 181365909 -69321945 + MIR SINE MIR 48 262 0 273 29 0 0 chr2 181366192 181366226 -69321628 + (GA)n Simple_repeat Simple_repeat 2 35 0 527 275 130 31 chr2 181367104 181367519 -69320335 + LTR33 LTR ERVL 1 456 -65 22 0 0 0 chr2 181369532 181369554 -69318300 + AT_rich Low_complexity Low_complexity 1 22 0 253 245 19 0 chr2 181370016 181370069 -69317785 + L2 LINE L2 3215 3268 -4 971 228 37 0 chr2 181370171 181370386 -69317468 - MER58A DNA MER1_type -1 223 1 183 42 0 0 chr2 181371661 181371685 -69316169 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 710 223 70 0 chr2 181372053 181372210 -69315644 + MLT1A1 LTR MaLR 198 365 0 315 275 111 12 chr2 181372364 181372535 -69315319 + MER117 DNA MER1_type 10 197 0 217 219 151 68 chr2 181372971 181373117 -69314737 + MIR SINE MIR 34 191 -71 769 223 55 40 chr2 181373118 181373320 -69314534 + MIR SINE MIR 56 260 -2 443 18 18 0 chr2 181374253 181374309 -69313545 + (TCTA)n Simple_repeat Simple_repeat 3 59 0 308 64 21 0 chr2 181374319 181374366 -69313488 + (TCCA)n Simple_repeat Simple_repeat 3 50 0 723 313 139 15 chr2 181375642 181376102 -69311752 + L2 LINE L2 563 1079 -2235 939 324 86 4 chr2 181376170 181376646 -69311208 + L2 LINE L2 1647 2161 -1153 1721 186 28 44 chr2 181376693 181377239 -69310615 + L1ME1 LINE L1 5658 6331 -3 568 330 59 0 chr2 181377238 181377430 -69310424 + L2 LINE L2 2215 2417 -897 * 376 196 39 10 chr2 181377424 181377526 -69310328 - MLT1J LTR MaLR -21 476 364 * 305 236 171 41 chr2 181377650 181377773 -69310081 - MLT1J LTR MaLR -353 158 20 27 0 0 0 chr2 181377841 181377868 -69309986 + AT_rich Low_complexity Low_complexity 1 27 0 280 272 43 11 chr2 181379305 181379397 -69308457 - MIR SINE MIR -80 182 88 587 249 154 113 chr2 181380138 181380651 -69307203 + MLT1L LTR MaLR 1 534 -81 1728 163 28 3 chr2 181380706 181380995 -69306859 + AluJb SINE Alu 17 312 0 243 244 78 119 chr2 181381057 181381250 -69306604 - L2 LINE L2 -322 2991 2807 359 292 123 67 chr2 181382032 181382227 -69305627 + MIR SINE MIR 13 218 -44 1601 157 3 44 chr2 181382266 181382559 -69305295 - AluJo SINE Alu -14 298 18 222 213 120 27 chr2 181382690 181382765 -69305089 - L2 LINE L2 -11 3302 3221 646 250 57 79 chr2 181384304 181384620 -69303234 + L2 LINE L2 3005 3313 0 535 350 91 35 chr2 181384620 181385145 -69302709 + L2 LINE L2 2714 3270 -2 451 241 120 108 chr2 181385324 181385565 -69302289 + MIR SINE MIR 13 256 -6 225 0 0 0 chr2 181386054 181386079 -69301775 + (TG)n Simple_repeat Simple_repeat 1 25 0 1002 173 12 0 chr2 181387177 181387359 -69300495 - AluSg/x SINE Alu 0 308 125 244 195 0 26 chr2 181387368 181387445 -69300409 + (TA)n Simple_repeat Simple_repeat 1 75 0 1718 94 8 4 chr2 181387447 181387691 -69300163 - AluY SINE Alu -14 297 53 1326 158 60 38 chr2 181387792 181388190 -69299664 - pTR5 LTR ERV1 -1279 1159 753 1376 227 42 42 chr2 181388190 181388591 -69299263 - L1MA9 LINE L1 -128 6184 5784 14541 127 21 9 chr2 181388599 181390813 -69297041 - Tigger1 DNA MER2_type -18 2400 160 1807 169 46 27 chr2 181391247 181391619 -69296235 - MER58D DNA MER1_type -2 384 6 297 294 14 70 chr2 181391649 181391792 -69296062 + MIR SINE MIR 90 224 -38 317 343 42 30 chr2 181391816 181391982 -69295872 - L2 LINE L2 -538 2776 2609 1986 164 16 3 chr2 181392098 181392421 -69295433 + MSTB LTR MaLR 1 327 -99 717 122 0 0 chr2 181392778 181392876 -69294978 + MSTB LTR MaLR 329 426 0 1852 203 62 37 chr2 181392879 181393333 -69294521 + MLT1D LTR MaLR 41 505 0 22 0 0 0 chr2 181393435 181393457 -69294397 + AT_rich Low_complexity Low_complexity 1 22 0 254 359 0 38 chr2 181396108 181396239 -69291615 - MIR SINE MIR -50 212 87 206 118 0 0 chr2 181396618 181396652 -69291202 + (T)n Simple_repeat Simple_repeat 1 34 0 335 251 95 60 chr2 181397148 181397366 -69290488 + MIR SINE MIR 20 247 -15 202 222 0 0 chr2 181397375 181397411 -69290443 + (CTA)n Simple_repeat Simple_repeat 1 36 0 187 245 61 0 chr2 181398053 181398102 -69289752 - L2 LINE L2 0 3272 3221 342 344 36 10 chr2 181398267 181398462 -69289392 + L3 LINE CR1 1067 1266 -311 264 30 0 0 chr2 181398956 181398989 -69288865 + (CA)n Simple_repeat Simple_repeat 2 34 0 420 254 62 95 chr2 181399309 181399761 -69288093 + MLT1K LTR MaLR 144 580 -8 358 292 18 16 chr2 181399989 181400110 -69287744 - MIR SINE MIR -67 141 36 284 311 84 0 chr2 181400149 181400268 -69287586 + MIR SINE MIR 58 186 -76 685 179 13 107 chr2 181400697 181400810 -69287044 + L2 LINE L2 3111 3194 -119 3166 57 0 0 chr2 181400810 181401179 -69286675 - L1PA6 LINE L1 -4 6150 5782 685 179 13 107 chr2 181401179 181401289 -69286565 + L2 LINE L2 3194 3313 0 183 80 0 0 chr2 181401793 181401818 -69286036 + (A)n Simple_repeat Simple_repeat 1 25 0 2196 133 0 27 chr2 181402118 181402487 -69285367 - L1MA5 LINE L1 0 6300 5942 189 94 0 0 chr2 181402487 181402519 -69285335 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1086 191 10 15 chr2 181402519 181402718 -69285136 - AluJb SINE Alu -28 284 87 2548 144 8 67 chr2 181402762 181403270 -69284584 - L1 LINE L1 -2165 3981 3504 1905 76 8 45 chr2 181403774 181404038 -69283816 - AluSc SINE Alu -17 292 39 294 303 55 9 chr2 181404619 181404728 -69283126 + L3 LINE CR1 1277 1390 -187 592 158 0 122 chr2 181404739 181404878 -69282976 - FLAM_A SINE Alu -10 132 11 256 261 143 17 chr2 181405919 181406038 -69281816 - L2 LINE L2 0 3313 3180 2585 157 62 21 chr2 181406270 181406704 -69281150 - LTR47A LTR ERVL 0 452 1 211 163 35 128 chr2 181407343 181407429 -69280425 - MIR SINE MIR -11 251 174 451 282 17 0 chr2 181407736 181407853 -69280001 + L2 LINE L2 3195 3313 0 398 20 20 0 chr2 181410023 181410074 -69277780 + (TG)n Simple_repeat Simple_repeat 2 53 0 2351 75 0 0 chr2 181410388 181410670 -69277184 - AluSx SINE Alu -30 282 1 288 189 21 21 chr2 181410737 181410832 -69277022 + GA-rich Low_complexity Low_complexity 3 97 0 2029 142 50 0 chr2 181410892 181411231 -69276623 - MER46B DNA MER2_type -5 231 1 3079 139 38 55 chr2 181412548 181413132 -69274722 - MER4B LTR ERV1 -36 574 1 279 0 0 0 chr2 181413455 181413486 -69274368 + (CA)n Simple_repeat Simple_repeat 2 32 0 318 271 35 0 chr2 181413915 181414000 -69273854 + MIR SINE MIR 104 191 -71 2285 100 3 3 chr2 181414010 181414321 -69273533 - AluSx SINE Alu -1 311 1 670 185 33 13 chr2 181417054 181417205 -69270649 + MIR SINE MIR 80 233 -29 195 329 77 28 chr2 181417596 181417739 -69270115 - L3b LINE CR1 -16 1567 1418 2256 183 14 0 chr2 181419160 181419520 -69268334 - MLT1A1 LTR MaLR 0 365 1 423 272 100 44 chr2 181419709 181419889 -69267965 - MIR SINE MIR -70 192 3 21 0 0 0 chr2 181420128 181420149 -69267705 + AT_rich Low_complexity Low_complexity 1 21 0 231 281 31 16 chr2 181420415 181420479 -69267375 + MIR SINE MIR 20 84 -124 1045 271 114 35 chr2 181421311 181421742 -69266112 + MLT1J LTR MaLR 4 468 -43 612 270 85 16 chr2 181421903 181422092 -69265762 + MIR SINE MIR 2 203 -59 2713 115 59 18 chr2 181422912 181423356 -69264498 + L1MA8 LINE L1 5823 6284 -7 504 315 24 0 chr2 181424342 181424469 -69263385 - L2 LINE L2 -2 3270 3141 2168 111 14 3 chr2 181426772 181427069 -69260785 - AluSc SINE Alu -9 300 1 541 215 51 32 chr2 181427162 181427320 -69260534 + MER103 DNA DNA 4 164 -2 23 33 0 0 chr2 181428029 181428059 -69259795 + AT_rich Low_complexity Low_complexity 1 30 0 376 138 86 60 chr2 181428195 181428311 -69259543 - L1ME4a LINE L1 -196 5925 5807 1111 150 35 71 chr2 181428345 181428484 -69259370 + AluSx SINE Alu 1 130 -182 2788 22 3 0 chr2 181428484 181428800 -69259054 + AluYb8 SINE Alu 1 317 -1 1111 150 35 71 chr2 181428800 181428886 -69258968 + AluSx SINE Alu 130 218 -94 259 251 165 52 chr2 181429296 181429623 -69258231 + LTR33 LTR ERVL 158 521 0 910 314 40 35 chr2 181429623 181430046 -69257808 + L2 LINE L2 2536 2960 -354 513 0 56 0 chr2 181430143 181430215 -69257639 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 363 209 0 149 chr2 181430233 181430381 -69257473 + L2 LINE L2 3188 3313 0 1119 185 74 79 chr2 181430606 181431000 -69256854 - Charlie4a DNA MER1_type -13 495 104 1161 161 42 0 chr2 181431000 181431216 -69256638 - AluJb SINE Alu 0 308 85 329 171 125 0 chr2 181431216 181431304 -69256550 - Charlie4a DNA MER1_type -393 115 17 556 319 63 43 chr2 181434617 181434871 -69252983 - MIR SINE MIR -2 260 2 1238 213 72 7 chr2 181435673 181435950 -69251904 - AluJo SINE Alu -17 295 1 1433 134 27 116 chr2 181436480 181436816 -69251038 + AluYb8 SINE Alu 1 306 -12 2151 75 65 0 chr2 181438453 181438732 -69249122 - AluSp SINE Alu -16 297 1 227 363 159 0 chr2 181439112 181439225 -69248629 - L2 LINE L2 -37 3235 3105 518 279 32 7 chr2 181439333 181439487 -69248367 - MIR SINE MIR -65 197 40 320 300 56 0 chr2 181439702 181439792 -69248062 + L2 LINE L2 3201 3295 -18 208 256 0 0 chr2 181439792 181439835 -69248019 + GA-rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr2 181440919 181440941 -69246913 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr2 181441441 181441464 -69246390 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 21 57 0 0 chr2 181441673 181441708 -69246146 + AT_rich Low_complexity Low_complexity 1 35 0 373 267 82 46 chr2 181442640 181442835 -69245019 + L1ME4a LINE L1 5097 5298 -848 351 325 129 12 chr2 181442846 181443335 -69244519 + L1ME4a LINE L1 5351 5896 -225 391 320 56 97 chr2 181443886 181444330 -69243524 - L2 LINE L2 0 3272 2847 197 196 78 39 chr2 181444394 181444445 -69243409 - MER5B DNA MER1_type -48 130 78 554 305 23 11 chr2 181445155 181445332 -69242522 + MIR SINE MIR 84 262 0 369 162 9 76 chr2 181446083 181446188 -69241666 - MER94 DNA DNA 0 134 37 1225 294 97 19 chr2 181446225 181446698 -69241156 + L2 LINE L2 2804 3313 0 1515 196 28 6 chr2 181446794 181447121 -69240733 - L1MB8 LINE L1 -10 6168 5835 2232 86 0 51 chr2 181447264 181447579 -69240275 - AluY SINE Alu -12 299 1 400 291 105 14 chr2 181447833 181448010 -69239844 + MIR SINE MIR 15 208 -54 626 139 0 6 chr2 181448079 181448317 -69239537 + AluJb SINE Alu 1 285 -27 423 0 0 0 chr2 181448317 181448364 -69239490 + (TA)n Simple_repeat Simple_repeat 2 48 0 342 61 0 0 chr2 181448364 181448413 -69239441 + (GA)n Simple_repeat Simple_repeat 1 49 0 227 270 105 28 chr2 181448798 181449369 -69238485 - L1MC4 LINE L1 -3 8039 7292 246 156 0 0 chr2 181449825 181449870 -69237984 + (CA)n Simple_repeat Simple_repeat 2 46 0 448 137 0 51 chr2 181450454 181450571 -69237283 + (TTCC)n Simple_repeat Simple_repeat 4 114 0 317 346 60 21 chr2 181455527 181455761 -69232093 + L2 LINE L2 2427 2669 -645 420 279 97 26 chr2 181455798 181455952 -69231902 + L2 LINE L2 3104 3268 -4 231 338 39 13 chr2 181455957 181456034 -69231820 - L2 LINE L2 -31 3282 3204 499 242 62 92 chr2 181456363 181456797 -69231057 + MLT1H LTR MaLR 129 549 0 288 328 168 0 chr2 181457307 181457432 -69230422 - L2 LINE L2 -2 3270 3125 263 309 102 47 chr2 181458011 181458267 -69229587 + LTR67 LTR ERVL 25 294 -263 2312 184 41 9 chr2 181458308 181458769 -69229085 + MER70B LTR ERVL 1 476 -102 358 262 111 8 chr2 181458839 181458965 -69228889 + LTR67 LTR ERVL 419 557 0 560 266 39 0 chr2 181459173 181459301 -69228553 + L2 LINE L2 3160 3292 -21 261 268 0 0 chr2 181460158 181460214 -69227640 + CT-rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 181461464 181461485 -69226369 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 183 42 0 0 chr2 181462246 181462270 -69225584 + (TTTAA)n Simple_repeat Simple_repeat 4 27 0 7633 31 0 0 chr2 181462270 181463444 -69224410 - L1PA3 LINE L1 -7 6148 4972 1923 155 3 13 chr2 181463513 181463817 -69224037 - AluSx SINE Alu -11 301 1 1463 222 17 28 chr2 181464214 181464574 -69223280 - MLT1A1 LTR MaLR -9 356 1 1316 180 173 53 chr2 181464899 181465332 -69222522 - MER31A LTR ERV1 0 485 1 1680 196 128 9 chr2 181465697 181466191 -69221663 - MER39 LTR ERV1 0 707 4 14289 129 21 17 chr2 181466478 181468228 -69219626 - Tigger1 DNA MER2_type 0 2418 655 2556 119 38 24 chr2 181468228 181468648 -69219206 - MSTB LTR MaLR 0 426 1 14289 129 21 17 chr2 181468648 181469306 -69218548 - Tigger1 DNA MER2_type -1763 655 1 705 301 31 9 chr2 181470967 181471196 -69216658 + MIR SINE MIR 28 261 -1 41 36 0 0 chr2 181471673 181471728 -69216126 + AT_rich Low_complexity Low_complexity 1 55 0 758 121 8 15 chr2 181472197 181472329 -69215525 + MER3 DNA MER1_type 36 166 -43 2150 122 7 0 chr2 181472329 181472633 -69215221 + AluSg1 SINE Alu 1 306 -3 621 162 0 124 chr2 181472633 181472699 -69215155 - MER3 DNA MER1_type -10 152 79 1841 171 8 58 chr2 181472699 181473092 -69214762 + MER93b LTR ERV1 1 373 0 621 162 0 124 chr2 181473092 181473198 -69214656 - MER3 DNA MER1_type -83 79 2 419 248 277 0 chr2 181473629 181473766 -69214088 - MER5A DNA MER1_type -6 183 9 462 299 34 53 chr2 181475378 181475585 -69212269 + L2 LINE L2 3110 3312 -1 213 351 14 0 chr2 181475949 181476023 -69211831 + MIR SINE MIR 65 139 -69 26 0 0 0 chr2 181476163 181476189 -69211665 + AT_rich Low_complexity Low_complexity 1 26 0 416 323 103 18 chr2 181476291 181476514 -69211340 + L2 LINE L2 1836 2077 -1237 889 276 109 41 chr2 181476514 181476927 -69210927 + L2 LINE L2 2231 2671 -643 2742 209 60 3 chr2 181476932 181477544 -69210310 + MER82 DNA MER2_type 7 653 0 228 319 0 0 chr2 181477588 181477657 -69210197 + L2 LINE L2 2717 2785 -529 196 263 171 0 chr2 181478014 181478090 -69209764 + L2 LINE L2 3220 3308 -5 289 333 45 30 chr2 181478109 181478241 -69209613 + L2 LINE L2 3175 3308 -5 266 0 29 0 chr2 181478809 181478843 -69209011 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 890 180 21 32 chr2 181479392 181479581 -69208273 + MER5A DNA MER1_type 2 188 -1 622 280 63 48 chr2 181479911 181480243 -69207611 - MLT1H LTR MaLR -205 344 8 2081 115 36 0 chr2 181480548 181480826 -69207028 + AluSx SINE Alu 1 288 -24 22 35 0 0 chr2 181481968 181481997 -69205857 + AT_rich Low_complexity Low_complexity 1 29 0 2849 205 95 12 chr2 181483109 181484506 -69203348 - L1ME1 LINE L1 -97 6069 4557 28 0 0 0 chr2 181484506 181484534 -69203320 + AT_rich Low_complexity Low_complexity 1 28 0 773 104 9 0 chr2 181484557 181484663 -69203191 + U6 snRNA snRNA 1 107 0 4974 102 14 4 chr2 181484663 181485425 -69202429 + L1PA14 LINE L1 5389 6158 -3 2557 53 7 0 chr2 181485736 181486039 -69201815 + AluY SINE Alu 1 305 -6 22 56 0 0 chr2 181486211 181486247 -69201607 + AT_rich Low_complexity Low_complexity 1 36 0 470 258 154 11 chr2 181486304 181486486 -69201368 + MIR SINE MIR 20 227 -35 239 302 16 0 chr2 181487407 181487470 -69200384 - L3 LINE CR1 -2 1575 1512 1786 178 81 3 chr2 181487959 181488341 -69199513 + L1MB7 LINE L1 5754 6165 -19 270 286 71 0 chr2 181488511 181488581 -69199273 + MIR SINE MIR 79 153 -109 345 257 132 44 chr2 181488613 181488749 -69199105 - MIR SINE MIR 0 262 115 409 214 118 53 chr2 181488846 181489033 -69198821 - L1ME4a LINE L1 -43 6078 5880 469 230 27 142 chr2 181489146 181489407 -69198447 + MLT1L LTR MaLR 48 278 -337 461 264 94 13 chr2 181490290 181490525 -69197329 - L1ME4a LINE L1 -332 5789 5536 408 262 16 60 chr2 181490756 181490939 -69196915 - LTR67 LTR ERVL -35 522 348 326 261 52 52 chr2 181491289 181491442 -69196412 - L1ME4a LINE L1 -917 5229 5077 6376 51 0 0 chr2 181491563 181492384 -69195470 - L1PA6 LINE L1 0 6154 5331 345 282 88 28 chr2 181492388 181492569 -69195285 - L1ME4a LINE L1 -1220 4926 4735 3147 132 61 24 chr2 181492691 181493312 -69194542 - L1MA8 LINE L1 -7 6284 5641 1609 185 3 3 chr2 181493318 181493620 -69194234 - LOR1a LTR ERV1 -13 484 183 1170 156 25 3 chr2 181493719 181494050 -69193804 - L1MA8 LINE L1 -743 5403 5144 766 211 6 17 chr2 181494059 181494234 -69193620 - LOR1a LTR ERV1 -8 489 317 336 171 13 26 chr2 181494258 181494334 -69193520 - LOR1b LTR ERV1 -244 217 143 370 163 25 12 chr2 181494352 181494432 -69193422 - L1MA8 LINE L1 -1000 5146 5066 28 48 0 0 chr2 181494502 181494544 -69193310 + AT_rich Low_complexity Low_complexity 1 42 0 833 278 48 9 chr2 181495018 181495248 -69192606 + MIR SINE MIR 5 243 -19 180 111 0 0 chr2 181495250 181495277 -69192577 + (CAT)n Simple_repeat Simple_repeat 1 27 0 1959 134 31 7 chr2 181495897 181496189 -69191665 - AluSx SINE Alu -11 301 3 510 311 19 5 chr2 181496711 181496920 -69190934 - HAL1b LINE L1 -677 671 460 2142 128 0 0 chr2 181497155 181497453 -69190401 - AluSg SINE Alu -12 298 1 1567 137 20 28 chr2 181497577 181497826 -69190028 + AluSx SINE Alu 1 247 -65 1808 140 110 22 chr2 181497826 181498171 -69189683 - MER57A LTR ERV1 -17 386 8 1888 140 10 27 chr2 181500719 181501012 -69186842 + AluJo SINE Alu 3 290 -22 192 184 276 13 chr2 181501108 181501184 -69186670 + L2 LINE L2 3218 3313 0 189 0 0 0 chr2 181501602 181501623 -69186231 + (TATG)n Simple_repeat Simple_repeat 4 24 0 1619 171 24 24 chr2 181501623 181501910 -69185944 - AluJo SINE Alu -25 287 1 2898 27 0 0 chr2 181502269 181502606 -69185248 + L1PA4 LINE L1 5817 6153 -2 309 365 7 7 chr2 181502609 181502754 -69185100 - MIR SINE MIR -71 191 47 23 33 0 0 chr2 181502793 181502823 -69185031 + AT_rich Low_complexity Low_complexity 1 30 0 2094 119 10 0 chr2 181502825 181503118 -69184736 + AluJb SINE Alu 1 296 -16 341 241 13 0 chr2 181503159 181503238 -69184616 - MIR SINE MIR -70 192 113 210 289 94 78 chr2 181503234 181503362 -69184492 - L2 LINE L2 -27 3245 3116 * 244 296 41 71 chr2 181504291 181504460 -69183394 - MIR3 SINE MIR -15 193 30 1255 157 9 0 chr2 181504477 181504687 -69183167 - Tigger5 DNA MER2_type 0 2323 2112 1212 215 73 14 chr2 181504692 181504980 -69182874 - Tigger5 DNA MER2_type -2016 307 3 1089 74 20 0 chr2 181505015 181505163 -69182691 - L1PA8 LINE L1 -5 6167 6017 1581 141 48 24 chr2 181505413 181505704 -69182150 - L1MC1 LINE L1 -12 6321 6024 1017 140 23 0 chr2 181505718 181505889 -69181965 + L1MC/D LINE L1 5527 5701 -632 1525 151 34 128 chr2 181506692 181507076 -69180778 + MER7A DNA MER2_type 1 346 0 532 227 26 13 chr2 181507334 181507488 -69180366 + MER63A DNA MER1_type 47 202 -8 332 282 107 0 chr2 181507568 181507699 -69180155 + MIR SINE MIR 118 262 0 3100 106 11 15 chr2 181510027 181510482 -69177372 - L1PA13 LINE L1 -3 6160 5708 181 250 42 0 chr2 181511741 181511789 -69176065 + MIR SINE MIR 116 165 -97 469 249 52 46 chr2 181512368 181512541 -69175313 - MIR SINE MIR -50 212 39 2143 238 55 63 chr2 181512896 181513654 -69174200 - MER20B DNA MER1_type -30 753 2 217 311 57 38 chr2 181513838 181513944 -69173910 + MIR SINE MIR 16 123 -85 4913 151 56 7 chr2 181515227 181516850 -69171004 + L1PB4 LINE L1 4436 6142 -14 758 232 0 44 chr2 181516904 181517085 -69170769 - MER5B DNA MER1_type -5 173 1 1545 121 0 5 chr2 181517127 181517342 -69170512 - AluSq SINE Alu -99 214 1 3538 105 90 5 chr2 181518404 181519006 -69168848 + L1MA3 LINE L1 5653 6305 0 2270 87 0 40 chr2 181519712 181520034 -69167820 - AluY SINE Alu -1 310 2 23 54 0 0 chr2 181520189 181520226 -69167628 + AT_rich Low_complexity Low_complexity 1 37 0 280 385 0 0 chr2 181520762 181520871 -69166983 + MIR3 SINE MIR 72 180 -28 315 0 0 0 chr2 181523552 181523587 -69164267 + (TG)n Simple_repeat Simple_repeat 1 35 0 270 81 0 0 chr2 181523587 181523624 -69164230 + (GA)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr2 181523789 181523817 -69164037 + AT_rich Low_complexity Low_complexity 1 28 0 190 205 0 0 chr2 181524307 181524346 -69163508 + MIR SINE MIR 152 190 -72 202 300 192 7 chr2 181524964 181525261 -69162593 + L2 LINE L2 1897 2248 -1066 276 100 0 0 chr2 181525491 181525531 -69162323 + (CTA)n Simple_repeat Simple_repeat 1 40 0 4229 121 18 39 chr2 181525642 181526416 -69161438 + L1MA8 LINE L1 5369 6126 -165 189 191 0 48 chr2 181527117 181527159 -69160695 + MIR SINE MIR 67 106 -102 575 327 23 12 chr2 181528081 181528338 -69159516 - MIR SINE MIR 0 262 3 185 329 53 0 chr2 181528352 181528428 -69159426 + MIR SINE MIR 86 165 -97 219 133 0 0 chr2 181528881 181528911 -69158943 + L2 LINE L2 3264 3293 -20 366 265 149 10 chr2 181529897 181530206 -69157648 + L1 LINE L1 3864 4215 -1931 2487 73 0 0 chr2 181530254 181530556 -69157298 + AluSc SINE Alu 1 302 -7 24 0 0 0 chr2 181530678 181530702 -69157152 + AT_rich Low_complexity Low_complexity 1 24 0 396 0 0 0 chr2 181530735 181530779 -69157075 + (TA)n Simple_repeat Simple_repeat 2 45 0 239 215 215 8 chr2 181530877 181530998 -69156856 + L1 LINE L1 4513 4658 -1488 512 336 93 15 chr2 181531057 181531452 -69156402 + L1 LINE L1 4735 5165 -981 255 204 0 0 chr2 181531455 181531509 -69156345 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 821 168 42 16 chr2 181531599 181531790 -69156064 - MER63 DNA MER1_type -58 1004 809 192 125 0 0 chr2 181532008 181532040 -69155814 + (T)n Simple_repeat Simple_repeat 1 32 0 5931 63 0 1 chr2 181532050 181532827 -69155027 - L1PA6 LINE L1 0 6154 5379 1642 142 13 66 chr2 181533310 181533613 -69154241 - AluJo SINE Alu -8 304 18 205 268 0 0 chr2 181533721 181533734 -69154120 - L2 LINE L2 -3 3269 3229 216 71 0 0 chr2 181533734 181533762 -69154092 - MIR SINE MIR -10 252 225 378 42 0 0 chr2 181534459 181534507 -69153347 + (TG)n Simple_repeat Simple_repeat 2 49 0 608 302 84 13 chr2 181535339 181535564 -69152290 - MIR SINE MIR -20 242 2 2001 110 48 42 chr2 181535803 181536157 -69151697 - THE1B LTR MaLR 0 364 9 212 329 35 0 chr2 181537718 181537803 -69150051 + MIR SINE MIR 53 140 -122 446 299 15 15 chr2 181538293 181538430 -69149424 + MIR SINE MIR 7 143 -119 487 297 51 6 chr2 181539057 181539232 -69148622 - MIR SINE MIR -58 204 22 201 74 0 0 chr2 181540079 181540106 -69147748 + (CAG)n Simple_repeat Simple_repeat 3 29 0 244 302 47 12 chr2 181540158 181540244 -69147610 - MIR SINE MIR -64 198 110 365 331 84 46 chr2 181540271 181540594 -69147260 + L1ME1 LINE L1 6 340 -5730 1186 256 34 54 chr2 181541023 181541655 -69146199 + L1ME1 LINE L1 391 1023 -5060 3773 222 81 38 chr2 181541675 181544019 -69143835 + L1MCb LINE L1 3 2574 -3990 963 208 40 68 chr2 181544021 181544123 -69143731 + L1ME1 LINE L1 1026 1129 -4951 1521 185 14 27 chr2 181544123 181544415 -69143439 + AluJo SINE Alu 3 290 -22 963 208 40 68 chr2 181544415 181544663 -69143191 + L1ME1 LINE L1 1129 1366 -4714 * 2415 130 8 127 chr2 181544661 181544775 -69143079 + L1MA8 LINE L1 4866 4992 -1191 2149 166 67 12 chr2 181544775 181545179 -69142675 - MSTB LTR MaLR 0 426 1 2415 130 8 127 chr2 181545179 181545546 -69142308 + L1MA8 LINE L1 4992 5287 -896 1114 93 6 0 chr2 181545546 181545707 -69142147 + L1MA6 LINE L1 6133 6294 -6 2415 130 8 127 chr2 181545707 181545845 -69142009 + L1MA8 LINE L1 5287 5440 -743 329 174 0 3 chr2 181545845 181546081 -69141773 + AluJb SINE Alu 1 301 -1 3983 143 14 20 chr2 181546093 181546595 -69141259 + L1MA8 LINE L1 5424 5921 -370 2343 160 21 0 chr2 181546595 181546983 -69140871 - MSTD LTR MaLR 0 396 1 3983 143 14 20 chr2 181546983 181547214 -69140640 + L1MA8 LINE L1 5921 6152 -139 607 152 48 0 chr2 181547253 181547378 -69140476 + L1ME1 LINE L1 1349 1479 -4601 360 158 73 0 chr2 181547374 181547456 -69140398 - L1MA8 LINE L1 -281 6010 5923 * 1394 254 71 9 chr2 181547487 181548226 -69139628 + L1ME1 LINE L1 1475 2256 -3824 * 3868 252 56 14 chr2 181548213 181549661 -69138193 + L1ME1 LINE L1 3120 4627 -1453 4266 159 62 22 chr2 181549674 181550944 -69136910 + L1MA9 LINE L1 4834 6142 -104 1288 230 13 8 chr2 181550967 181551341 -69136513 + L1ME1 LINE L1 4643 5018 -1062 2084 215 117 19 chr2 181551343 181551975 -69135879 + L1ME1 LINE L1 5383 6076 -24 25 31 0 0 chr2 181552160 181552192 -69135662 + AT_rich Low_complexity Low_complexity 1 32 0 265 339 71 12 chr2 181552268 181552436 -69135418 + L2 LINE L2 2527 2704 -610 2173 210 65 35 chr2 181552661 181553393 -69134461 + MER21B LTR ERV1 12 841 -22 241 371 175 0 chr2 181553490 181553633 -69134221 + L2 LINE L2 3101 3268 -4 849 229 98 29 chr2 181554240 181554590 -69133264 - L1ME1 LINE L1 -19 6147 5825 1987 160 32 8 chr2 181554591 181554967 -69132887 + MLT1B LTR MaLR 1 385 -5 1966 196 77 26 chr2 181554982 181555512 -69132342 - L1ME1 LINE L1 -352 5814 5258 614 276 16 0 chr2 181555529 181555721 -69132133 - L1ME1 LINE L1 -2249 3897 3703 572 252 105 0 chr2 181555760 181555903 -69131951 - MIR SINE MIR -93 169 12 563 295 52 12 chr2 181556009 181556144 -69131710 + MIR SINE MIR 16 161 -101 616 26 26 0 chr2 181556144 181556221 -69131633 - MADE1 DNA Mariner -1 79 1 563 295 52 12 chr2 181556221 181556258 -69131596 + MIR SINE MIR 161 195 -67 588 200 9 0 chr2 181558398 181558503 -69129351 - Tigger2 DNA MER2_type -10 2708 2603 2117 108 42 0 chr2 181560821 181561109 -69126745 - AluSg SINE Alu -10 300 1 21 0 0 0 chr2 181561217 181561238 -69126616 + AT_rich Low_complexity Low_complexity 1 21 0 293 284 27 59 chr2 181563454 181563609 -69124245 + MER5A DNA MER1_type 28 189 0 202 326 169 0 chr2 181563609 181563698 -69124156 - L3 LINE CR1 -44 1533 1430 616 253 39 17 chr2 181564461 181564639 -69123215 + MIR SINE MIR 68 249 -13 196 192 0 151 chr2 181570547 181570620 -69117234 + L3 LINE CR1 1515 1576 -1 931 213 52 27 chr2 181570893 181571212 -69116642 + MLT1A2 LTR MaLR 1 374 0 564 328 43 17 chr2 181571234 181571466 -69116388 - L3 LINE CR1 -16 1561 1324 215 137 20 39 chr2 181571466 181571517 -69116337 + (CATTC)n Simple_repeat Simple_repeat 5 54 0 231 284 108 29 chr2 181571824 181571926 -69115928 + MIR3 SINE MIR 92 201 -7 1207 144 0 62 chr2 181572604 181572847 -69115007 - MSTB1 LTR MaLR -4 428 201 668 150 21 20 chr2 181572857 181573083 -69114771 - MSTB1 LTR MaLR -164 262 1 338 274 36 0 chr2 181573118 181573202 -69114652 - L2 LINE L2 0 3313 3227 725 335 94 13 chr2 181573278 181573726 -69114128 - L2 LINE L2 -355 2959 2476 630 288 152 66 chr2 181573864 181574412 -69113442 - L2 LINE L2 0 3272 2665 369 280 103 21 chr2 181574624 181574867 -69112987 - L1ME LINE L1 -311 5810 5548 1343 306 145 38 chr2 181575169 181576156 -69111698 + L2 LINE L2 1925 3079 -234 2143 115 16 3 chr2 181576156 181576461 -69111393 - AluSx SINE Alu -3 309 1 1343 306 145 38 chr2 181576461 181576725 -69111129 + L2 LINE L2 3079 3313 0 499 299 107 14 chr2 181577895 181578240 -69109614 + L1MC4a LINE L1 4738 5114 -1032 731 265 36 45 chr2 181578372 181578843 -69109011 + L1MC5 LINE L1 7451 7917 -44 190 282 0 42 chr2 181578854 181578925 -69108929 + MIR SINE MIR 195 262 0 435 231 69 121 chr2 181578954 181579141 -69108713 + L1MC4a LINE L1 5526 5684 -2124 2053 109 9 3 chr2 181579141 181579461 -69108393 - L1MA2 LINE L1 0 6304 5983 435 231 69 121 chr2 181579461 181579663 -69108191 + L1MC4a LINE L1 5684 5895 -1913 328 284 120 28 chr2 181579889 181580541 -69107313 + L1MC4a LINE L1 5219 5889 -275 313 252 97 0 chr2 181580727 181580830 -69107024 + L1ME4a LINE L1 5964 6076 -45 3484 80 0 0 chr2 181581114 181581551 -69106303 - L1PA14 LINE L1 -3 6158 5722 225 272 54 43 chr2 181583166 181583258 -69104596 + L2 LINE L2 3168 3260 -12 461 238 18 77 chr2 181583293 181583461 -69104393 + MER5B DNA MER1_type 21 178 0 825 231 0 6 chr2 181583606 181583775 -69104079 + MIR SINE MIR 81 248 -14 391 256 10 103 chr2 181584179 181584233 -69103621 + MIR SINE MIR 79 136 -126 2197 122 0 0 chr2 181584233 181584537 -69103317 - AluSx SINE Alu -8 304 1 391 256 10 103 chr2 181584537 181584685 -69103169 + MIR SINE MIR 136 262 0 283 303 30 81 chr2 181584707 181584905 -69102949 + L2 LINE L2 2865 3052 -220 789 224 19 0 chr2 181584952 181585113 -69102741 - MER5A DNA MER1_type 0 189 26 25 75 0 0 chr2 181586107 181586160 -69101694 + AT_rich Low_complexity Low_complexity 1 53 0 253 77 58 0 chr2 181586323 181586375 -69101479 + T-rich Low_complexity Low_complexity 1 55 0 193 324 29 15 chr2 181587863 181587931 -69099923 - MIR3 SINE MIR -49 159 91 206 180 20 40 chr2 181588219 181588269 -69099585 + MIR SINE MIR 98 146 -62 385 309 31 26 chr2 181588322 181588518 -69099336 - L1MC/D LINE L1 -346 5818 5665 208 267 0 0 chr2 181589702 181589747 -69098107 + (CA)n Simple_repeat Simple_repeat 1 45 0 236 264 14 56 chr2 181590403 181590475 -69097379 - L2 LINE L2 0 3272 3204 274 305 0 0 chr2 181590560 181590655 -69097199 + T-rich Low_complexity Low_complexity 1 95 0 609 306 73 38 chr2 181590919 181591314 -69096540 - MLT1I LTR MaLR 0 409 1 608 285 77 24 chr2 181592087 181592333 -69095521 + MIR SINE MIR 2 260 -2 428 192 77 71 chr2 181592534 181592716 -69095138 - MIR SINE MIR -10 252 70 297 0 0 0 chr2 181597704 181597737 -69090117 + (TG)n Simple_repeat Simple_repeat 2 34 0 216 0 0 0 chr2 181597880 181597904 -69089950 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2400 63 0 3 chr2 181597904 181598190 -69089664 - L1PA7 LINE L1 -18 6136 5852 968 132 0 26 chr2 181598464 181598616 -69089238 - FRAM SINE Alu -13 163 16 1781 117 50 37 chr2 181598706 181599004 -69088850 + AluSc SINE Alu 1 302 -7 455 211 21 7 chr2 181599064 181599206 -69088648 + CT-rich Low_complexity Low_complexity 2 145 0 26 50 0 0 chr2 181599597 181599637 -69088217 + AT_rich Low_complexity Low_complexity 1 40 0 192 77 0 0 chr2 181603195 181603221 -69084633 + (GGA)n Simple_repeat Simple_repeat 2 27 0 3395 34 5 0 chr2 181603302 181603682 -69084172 - L1PA7 LINE L1 -2 6152 5771 404 219 44 58 chr2 181603802 181603939 -69083915 + MIR SINE MIR 79 213 -49 188 135 27 0 chr2 181604056 181604093 -69083761 + CT-rich Low_complexity Low_complexity 2 39 0 344 287 239 11 chr2 181604255 181604443 -69083411 - L2 LINE L2 -779 2535 2305 342 299 37 0 chr2 181604531 181604638 -69083216 + MIR SINE MIR 81 191 -71 186 133 0 0 chr2 181606799 181606829 -69081025 + (CTA)n Simple_repeat Simple_repeat 1 30 0 813 217 156 0 chr2 181607076 181607352 -69080502 - MER5C DNA MER1_type 0 324 6 2716 205 101 59 chr2 181610381 181611389 -69076465 - L1MC5 LINE L1 -520 7441 6390 499 350 86 4 chr2 181611471 181612005 -69075849 + L1M4 LINE L1 4401 4978 -1168 1371 86 0 6 chr2 181612027 181612202 -69075652 - AluY SINE Alu -20 291 118 9425 31 5 0 chr2 181612210 181614046 -69073808 - L1PA3 LINE L1 0 6155 4315 356 80 0 0 chr2 181614299 181614349 -69073505 + MADE1 DNA Mariner 1 50 -30 260 413 28 0 chr2 181614349 181614458 -69073396 - L2 LINE L2 -45 3227 3116 342 316 79 51 chr2 181614536 181614594 -69073260 - L2 LINE L2 -470 2844 2789 1678 254 78 81 chr2 181614594 181615259 -69072595 + MLT2F LTR ERVL 1 663 0 342 316 79 51 chr2 181615259 181615415 -69072439 - L2 LINE L2 -525 2789 2624 1005 271 106 34 chr2 181615421 181615539 -69072315 + MLT1J2 LTR MaLR 4 112 -338 5078 30 7 0 chr2 181615539 181616126 -69071728 + L1PA4 LINE L1 5569 6159 0 1005 271 106 34 chr2 181616126 181616423 -69071431 + MLT1J2 LTR MaLR 112 450 0 496 346 13 21 chr2 181616479 181616716 -69071138 - L2 LINE L2 -778 2536 2302 248 395 96 13 chr2 181617409 181617723 -69070131 - L2 LINE L2 0 3272 2933 261 0 0 0 chr2 181618001 181618030 -69069824 + (TG)n Simple_repeat Simple_repeat 2 30 0 181 267 17 17 chr2 181618389 181618449 -69069405 - MER5A DNA MER1_type -123 66 7 554 277 22 22 chr2 181619434 181619618 -69068236 - MIR3 SINE MIR -6 202 19 183 156 0 0 chr2 181620337 181620369 -69067485 + (CA)n Simple_repeat Simple_repeat 2 33 0 1603 205 70 13 chr2 181620418 181620803 -69067051 + Charlie1b DNA MER1_type 1 407 -116 374 305 76 15 chr2 181621520 181621651 -69066203 - MIR SINE MIR -104 158 20 2207 186 36 87 chr2 181621934 181622352 -69065502 - MLT1D LTR MaLR 0 505 118 2342 110 0 0 chr2 181622352 181622653 -69065201 - AluSx SINE Alu -11 301 1 2207 186 36 87 chr2 181622653 181622766 -69065088 - MLT1D LTR MaLR -387 118 1 4591 145 18 20 chr2 181622936 181623703 -69064151 - L1MC2 LINE L1 0 6344 5579 754 288 83 4 chr2 181624295 181624524 -69063330 + MIR SINE MIR 12 258 -4 1140 286 92 23 chr2 181625381 181625857 -69061997 - LTR33 LTR ERVL 0 521 13 231 309 50 36 chr2 181626567 181626706 -69061148 - L3 LINE CR1 -7 1570 1430 204 236 127 64 chr2 181627013 181627123 -69060731 - MIR SINE MIR -115 147 31 495 0 0 0 chr2 181627774 181627829 -69060025 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 2039 130 0 0 chr2 181627829 181628113 -69059741 - AluSx SINE Alu -28 284 1 207 220 0 68 chr2 181628115 181628174 -69059680 - MER5A DNA MER1_type -114 75 21 26 30 0 0 chr2 181630887 181630920 -69056934 + AT_rich Low_complexity Low_complexity 1 33 0 192 179 0 0 chr2 181630934 181630973 -69056881 + (TA)n Simple_repeat Simple_repeat 2 40 0 511 258 84 32 chr2 181631463 181631618 -69056236 - MER5B DNA MER1_type -2 176 14 1021 201 9 61 chr2 181632198 181632427 -69055427 - MER20 DNA MER1_type -1 218 2 998 257 46 59 chr2 181632584 181633023 -69054831 - LTR16A LTR ERVL -2 448 16 200 367 13 0 chr2 181633667 181633746 -69054108 + GA-rich Low_complexity Low_complexity 5 84 0 258 105 0 0 chr2 181633896 181633934 -69053920 + (CA)n Simple_repeat Simple_repeat 2 39 0 2024 132 20 0 chr2 181633941 181634236 -69053618 - AluJb SINE Alu -11 301 1 332 338 46 7 chr2 181635846 181635997 -69051857 + L3 LINE CR1 569 725 -852 2213 101 34 10 chr2 181636421 181636719 -69051135 + AluSq SINE Alu 1 305 -8 362 308 25 8 chr2 181636748 181636868 -69050986 + MIR3 SINE MIR 37 158 -50 1058 175 0 74 chr2 181637087 181637276 -69050578 + FAM SINE Alu 1 175 0 469 221 88 0 chr2 181637468 181637581 -69050273 - MIR SINE MIR -29 233 111 339 316 26 39 chr2 181637774 181637929 -69049925 + MIR SINE MIR 65 217 -45 439 280 83 12 chr2 181639376 181639544 -69048310 + MIR SINE MIR 28 207 -55 2993 120 27 14 chr2 181640047 181640489 -69047365 - MER83 LTR ERV1 0 448 1 277 268 0 36 chr2 181641434 181641546 -69046308 - L1MA9 LINE L1 -30 6282 6175 4414 100 43 82 chr2 181641550 181642569 -69045285 - pTR5 LTR ERV1 0 2438 1149 2466 133 62 20 chr2 181642669 181643121 -69044733 - L1MA8 LINE L1 -174 6117 5647 1789 194 3 3 chr2 181643121 181643436 -69044418 - LOR1a LTR ERV1 0 497 183 1287 156 25 3 chr2 181643535 181643866 -69043988 - L1MA8 LINE L1 -743 5403 5144 835 198 72 20 chr2 181643875 181644150 -69043704 - LOR1a LTR ERV1 -8 489 143 411 163 25 12 chr2 181644168 181644248 -69043606 - L1MA8 LINE L1 -1000 5146 5066 28 48 0 0 chr2 181644318 181644360 -69043494 + AT_rich Low_complexity Low_complexity 1 42 0 826 278 48 9 chr2 181644834 181645064 -69042790 + MIR SINE MIR 5 243 -19 180 111 0 0 chr2 181645066 181645093 -69042761 + (CAT)n Simple_repeat Simple_repeat 1 27 0 1942 134 31 7 chr2 181645713 181646005 -69041849 - AluSx SINE Alu -11 301 3 586 296 46 5 chr2 181646527 181646743 -69041111 - HAL1b LINE L1 -677 671 447 2135 128 0 0 chr2 181646971 181647269 -69040585 - AluSg SINE Alu -12 298 1 1444 136 24 36 chr2 181647393 181647643 -69040211 + AluSx SINE Alu 1 247 -65 674 155 135 47 chr2 181647645 181647793 -69040061 - MER57A LTR ERV1 -26 377 217 1619 251 79 11 chr2 181647793 181648450 -69039404 + L1MDa LINE L1 1943 2644 -3896 4470 244 53 25 chr2 181648464 181649959 -69037895 + L1MDa LINE L1 3550 5087 -1453 292 164 0 18 chr2 181649972 181650027 -69037827 + L1MDa LINE L1 5294 5347 -1193 34275 40 37 2 chr2 181650131 181654327 -69033527 - L1P LINE L1 -1800 4346 5 1044 61 8 15 chr2 181654329 181654460 -69033394 - AluYb8 SINE Alu -188 130 1 514 191 0 11 chr2 181654682 181654776 -69033078 - MIR SINE MIR -118 144 52 1450 213 4 0 chr2 181654925 181655198 -69032656 - AluJo SINE Alu -36 276 3 730 305 139 17 chr2 181655842 181656245 -69031609 - L2 LINE L2 0 3313 2862 210 219 37 37 chr2 181658257 181658339 -69029515 + (CATA)n Simple_repeat Simple_repeat 3 84 0 332 282 8 57 chr2 181659127 181659251 -69028603 + MLT1H LTR MaLR 431 548 -1 199 203 31 0 chr2 181660449 181660513 -69027341 + GA-rich Low_complexity Low_complexity 3 68 0 210 162 0 0 chr2 181661137 181661174 -69026680 - L2 LINE L2 0 3313 3277 344 169 92 0 chr2 181661804 181661869 -69025985 + MIR SINE MIR 56 126 -136 481 256 128 54 chr2 181661890 181662132 -69025722 - L2 LINE L2 0 3313 3054 298 290 53 23 chr2 181662220 181662351 -69025503 + MIR SINE MIR 128 262 0 2269 126 134 13 chr2 181664032 181664412 -69023442 - MSTB LTR MaLR 0 426 1 211 308 0 0 chr2 181664543 181664595 -69023259 + MIR3 SINE MIR 115 166 -42 318 258 201 63 chr2 181665859 181666018 -69021836 - MIR SINE MIR -11 251 71 751 202 62 10 chr2 181666362 181666555 -69021299 - MER69 DNA AcHobo -229 2297 2095 892 201 75 45 chr2 181667409 181667690 -69020164 + MER69 DNA AcHobo 2077 2366 -160 2078 177 38 42 chr2 181667690 181668102 -69019752 - MSTB1 LTR MaLR 0 432 29 446 258 66 0 chr2 181668093 181668244 -69019610 + MER69 DNA AcHobo 2362 2522 -4 * 25 65 0 0 chr2 181672605 181672651 -69015203 + AT_rich Low_complexity Low_complexity 1 46 0 266 119 0 0 chr2 181672694 181672736 -69015118 + MIR SINE MIR 119 160 -102 460 81 32 0 chr2 181672793 181672855 -69014999 + L1MA9 LINE L1 6245 6308 -4 412 243 68 84 chr2 181673030 181673281 -69014573 + MER102b DNA MER1_type 60 306 -35 210 348 51 51 chr2 181673383 181673501 -69014353 - MIR SINE MIR -66 142 25 657 252 12 83 chr2 181674648 181674760 -69013094 + MIR SINE MIR 22 110 -152 1942 125 46 4 chr2 181674760 181675041 -69012813 + AluSx SINE Alu 3 295 -17 657 252 12 83 chr2 181675041 181675170 -69012684 + MIR SINE MIR 110 246 -16 29 28 0 0 chr2 181675185 181675221 -69012633 + AT_rich Low_complexity Low_complexity 1 36 0 7044 52 7 0 chr2 181675250 181676134 -69011720 - L1P LINE L1 -743 5403 4514 1437 198 16 110 chr2 181676528 181676847 -69011007 - AluJb SINE Alu -13 289 1 262 352 8 23 chr2 181676870 181676998 -69010856 + L2 LINE L2 2641 2766 -548 2383 133 42 14 chr2 181677297 181677651 -69010203 - THE1B LTR MaLR 0 364 1 12356 96 8 2 chr2 181677651 181679222 -69008632 - THE1B-int LTR MaLR 0 1580 1 2498 96 48 20 chr2 181679222 181679576 -69008278 - THE1B LTR MaLR 0 364 1 627 311 29 19 chr2 181682740 181682946 -69004908 - MIR SINE MIR 0 262 55 2848 10 0 0 chr2 181683971 181684281 -69003573 - AluYa5 SINE Alu -1 310 1 261 0 0 0 chr2 181685273 181685302 -69002552 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 240 35 0 0 chr2 181688509 181688538 -68999316 + (CA)n Simple_repeat Simple_repeat 2 30 0 394 287 33 33 chr2 181688768 181688918 -68998936 + L3b LINE CR1 1346 1495 -88 728 284 18 28 chr2 181689148 181689433 -68998421 + L1MC/D LINE L1 5540 5821 -1987 244 349 59 0 chr2 181690321 181690473 -68997381 + MIR SINE MIR 94 254 -8 21 0 0 0 chr2 181691179 181691200 -68996654 + AT_rich Low_complexity Low_complexity 1 21 0 384 349 23 0 chr2 181692032 181692164 -68995690 - MIR SINE MIR -44 218 84 608 266 98 6 chr2 181692882 181693055 -68994799 - MIR SINE MIR -44 218 30 246 214 0 36 chr2 181693256 181693312 -68994542 + L2 LINE L2 3236 3289 -24 204 357 55 43 chr2 181693361 181693934 -68993920 - L2 LINE L2 -75 3197 2610 431 145 0 0 chr2 181693994 181694063 -68993791 + Tigger2 DNA MER2_type 1 69 -2649 * 2249 129 88 26 chr2 181694053 181694406 -68993448 + Tigger2 DNA MER2_type 2273 2658 -60 2384 94 3 0 chr2 181694406 181694704 -68993150 - AluSx SINE Alu -13 299 1 2249 129 88 26 chr2 181694704 181694770 -68993084 + Tigger2 DNA MER2_type 2658 2718 0 456 133 18 106 chr2 181696640 181696753 -68991101 - MIR SINE MIR -92 170 68 21 0 0 0 chr2 181697100 181697121 -68990733 + AT_rich Low_complexity Low_complexity 1 21 0 367 292 103 19 chr2 181697969 181698128 -68989726 + MIR SINE MIR 30 209 -53 1767 138 3 80 chr2 181698137 181698464 -68989390 - AluSx SINE Alu -10 302 1 624 253 107 22 chr2 181700710 181700935 -68986919 - MIR SINE MIR -18 244 1 1611 144 3 61 chr2 181702891 181703204 -68984650 - AluJo SINE Alu -13 299 5 371 292 9 87 chr2 181703306 181703525 -68984329 + L2 LINE L2 3112 3313 0 25 31 0 0 chr2 181703732 181703764 -68984090 + AT_rich Low_complexity Low_complexity 1 32 0 516 16 0 0 chr2 181704363 181704424 -68983430 + (CA)n Simple_repeat Simple_repeat 1 61 0 13916 30 1 0 chr2 181705286 181707021 -68980833 - L1P LINE L1 -956 5190 3455 622 85 128 0 chr2 181709205 181709299 -68978555 + LTR40b LTR ERVL 356 461 -1 1197 245 38 27 chr2 181709380 181709736 -68978118 - L1ME3A LINE L1 -36 6134 5774 714 303 170 30 chr2 181710172 181710587 -68977267 + L2 LINE L2 2269 2624 -689 2121 158 77 22 chr2 181710587 181710991 -68976863 + MSTB LTR MaLR 1 426 0 714 303 170 30 chr2 181710991 181711386 -68976468 + L2 LINE L2 2624 3201 -112 615 133 18 35 chr2 181711521 181711634 -68976220 + MLT1C LTR MaLR 1 111 -356 325 280 0 47 chr2 181713096 181713284 -68974570 + MIR SINE MIR 2 261 -1 582 250 69 48 chr2 181713647 181713872 -68973982 - MIR SINE MIR 0 262 34 622 347 15 5 chr2 181715293 181715492 -68972362 + MIR SINE MIR 6 206 -56 336 247 11 0 chr2 181715505 181715594 -68972260 - MLT1B LTR MaLR -266 124 35 374 297 77 26 chr2 181715817 181715972 -68971882 - MIR3 SINE MIR -11 197 35 190 135 269 0 chr2 181716823 181716875 -68970979 - L2 LINE L2 0 3272 3207 2366 91 0 0 chr2 181716986 181717282 -68970572 + AluSq SINE Alu 1 296 -17 1862 146 7 19 chr2 181717290 181717599 -68970255 + AluSx SINE Alu 1 305 -7 239 296 0 0 chr2 181719208 181719279 -68968575 - MIR SINE MIR -25 237 167 365 272 68 28 chr2 181720350 181720503 -68967351 - MIR3 SINE MIR -54 154 8 196 304 122 17 chr2 181721333 181721448 -68966406 - MIR3 SINE MIR -68 140 14 1915 197 17 3 chr2 181722745 181723105 -68964749 - MLT1A1 LTR MaLR 0 365 1 515 232 14 43 chr2 181723323 181723461 -68964393 - MIR3 SINE MIR -60 148 15 1344 221 39 41 chr2 181723757 181724146 -68963708 - MLT1B LTR MaLR 0 390 3 396 369 12 6 chr2 181724426 181724586 -68963268 + L2 LINE L2 3104 3264 -8 347 304 36 9 chr2 181725921 181726033 -68961821 + MER5A DNA MER1_type 1 115 -74 293 341 0 0 chr2 181727013 181727118 -68960736 + MIR SINE MIR 33 137 -71 279 238 16 79 chr2 181727414 181727540 -68960314 - MLT1K LTR MaLR -1 587 470 845 194 61 17 chr2 181728246 181728426 -68959428 + MER5A DNA MER1_type 1 188 -1 274 279 0 0 chr2 181729541 181729602 -68958252 - L2 LINE L2 0 3272 3212 261 295 139 32 chr2 181730183 181730464 -68957390 + L2 LINE L2 2317 2627 -687 1680 156 25 7 chr2 181730760 181731043 -68956811 + AluJo SINE Alu 7 294 -18 411 289 69 56 chr2 181731778 181732089 -68955765 + MLT1J2 LTR MaLR 101 415 0 21 0 0 0 chr2 181732766 181732787 -68955067 + AT_rich Low_complexity Low_complexity 1 21 0 2206 124 0 0 chr2 181733414 181733712 -68954142 + AluSx SINE Alu 1 298 -14 1091 320 16 14 chr2 181734461 181734889 -68952965 - LTR16A LTR ERVL -6 444 16 2454 58 0 3 chr2 181735139 181735431 -68952423 - AluY SINE Alu -20 291 1 2215 105 10 0 chr2 181735860 181736156 -68951698 + AluSq SINE Alu 1 299 -14 22 0 0 0 chr2 181736236 181736258 -68951596 + AT_rich Low_complexity Low_complexity 1 22 0 570 284 99 15 chr2 181736258 181736459 -68951395 + MIR SINE MIR 34 251 -11 2559 44 0 0 chr2 181737177 181737473 -68950381 - AluY SINE Alu -15 296 1 279 239 53 0 chr2 181737914 181738027 -68949827 + LTR16A LTR ERVL 327 445 -5 464 227 38 30 chr2 181738740 181738872 -68948982 - MER94 DNA DNA -1 133 1 224 276 35 0 chr2 181739527 181739614 -68948240 - MIR SINE MIR 0 262 173 494 243 76 28 chr2 181739629 181739773 -68948081 + L2 LINE L2 3163 3313 0 220 279 63 25 chr2 181739793 181739872 -68947982 - MIR SINE MIR -85 177 96 210 254 115 69 chr2 181739936 181740066 -68947788 - MIR3 SINE MIR -59 149 14 2290 170 41 5 chr2 181740239 181740651 -68947203 - MSTA LTR MaLR -1 427 1 474 269 50 22 chr2 181740694 181740876 -68946978 - MLT1J2 LTR MaLR -11 439 253 22 0 0 0 chr2 181741810 181741832 -68946022 + AT_rich Low_complexity Low_complexity 1 22 0 915 284 8 16 chr2 181742377 181742634 -68945220 - MIR SINE MIR 0 262 8 2564 35 0 6 chr2 181747448 181747765 -68940089 + L1PA4 LINE L1 5841 6155 0 257 253 0 38 chr2 181748007 181748086 -68939768 - MIR SINE MIR -38 224 149 460 250 0 0 chr2 181748929 181749021 -68938833 + MER5B DNA MER1_type 79 170 -8 1058 185 27 0 chr2 181749027 181749211 -68938643 - MER5A DNA MER1_type 0 189 1 261 247 39 0 chr2 181749446 181749523 -68938331 + Tigger1 DNA MER2_type 936 1015 -1403 262 259 89 9 chr2 181751244 181751356 -68936498 - L1ME4a LINE L1 -33 6088 5968 1000 281 16 4 chr2 181751524 181751777 -68936077 - MIR SINE MIR 0 262 7 275 326 35 14 chr2 181751827 181751971 -68935883 - MER58C DNA MER1_type -5 210 64 475 239 18 35 chr2 181752307 181752420 -68935434 + MER5A DNA MER1_type 7 117 -72 3673 224 79 44 chr2 181753359 181755111 -68932743 + L1MDb LINE L1 770 2560 -3846 206 218 36 0 chr2 181756487 181756542 -68931312 + (TA)n Simple_repeat Simple_repeat 1 57 0 325 309 93 0 chr2 181757371 181757468 -68930386 + MIR SINE MIR 40 145 -63 216 316 184 26 chr2 181757674 181757826 -68930028 - MIR3 SINE MIR -23 185 10 264 204 0 0 chr2 181757833 181757882 -68929972 - L2 LINE L2 0 3313 3265 2249 96 3 0 chr2 181758781 181759108 -68928746 + AluSp SINE Alu 1 328 0 2315 88 0 53 chr2 181759161 181759481 -68928373 + AluSx SINE Alu 1 303 -9 707 245 97 26 chr2 181759875 181760338 -68927516 + L1ME4a LINE L1 5539 6104 -17 386 315 68 23 chr2 181761084 181761268 -68926586 + MIR SINE MIR 58 252 -10 338 180 220 10 chr2 181762555 181762655 -68925199 + L2 LINE L2 3192 3312 -1 4177 121 19 6 chr2 181762680 181763364 -68924490 + L1MA8 LINE L1 5592 6284 -7 436 284 126 10 chr2 181764734 181764940 -68922914 - MIR SINE MIR -10 252 25 394 208 19 57 chr2 181765261 181765367 -68922487 + MIR3 SINE MIR 96 197 -11 2471 203 24 13 chr2 181766112 181766665 -68921189 - L1ME3 LINE L1 -7 6155 5597 225 0 0 0 chr2 181768208 181768233 -68919621 + (TA)n Simple_repeat Simple_repeat 1 25 0 424 313 95 80 chr2 181769036 181769558 -68918296 - L2 LINE L2 -12 3260 2721 266 228 33 33 chr2 181770439 181770531 -68917323 + MIR SINE MIR 168 259 -3 541 292 8 29 chr2 181770815 181771058 -68916796 + L1ME LINE L1 5567 5804 -317 281 273 167 13 chr2 181771316 181771466 -68916388 - MIR SINE MIR -14 248 76 193 329 43 14 chr2 181771465 181771535 -68916319 + MIR SINE MIR 164 235 -27 * 209 194 0 32 chr2 181772640 181772702 -68915152 + CT-rich Low_complexity Low_complexity 3 62 0 1034 153 0 0 chr2 181873434 181873821 -68814033 - ALR/Alpha Satellite centromeric 0 387 1 957 171 9 0 chr2 181873834 181874496 -68813358 - ALR/Alpha Satellite centromeric 0 668 1 1073 155 2 0 chr2 181874509 181875856 -68811998 - ALR/Alpha Satellite centromeric 0 1349 1 957 170 9 0 chr2 181875869 181876531 -68811323 - ALR/Alpha Satellite centromeric 0 668 1 1051 157 2 0 chr2 181876544 181877891 -68809963 - ALR/Alpha Satellite centromeric 0 1349 1 957 171 9 0 chr2 181877904 181878566 -68809288 - ALR/Alpha Satellite centromeric 0 668 1 1068 152 3 0 chr2 181878579 181879925 -68807929 - ALR/Alpha Satellite centromeric 0 1350 1 947 171 8 0 chr2 181879938 181880600 -68807254 - ALR/Alpha Satellite centromeric 0 667 1 1073 154 2 0 chr2 181880613 181882302 -68805552 - ALR/Alpha Satellite centromeric 0 1691 1 957 173 9 0 chr2 181882315 181882977 -68804877 - ALR/Alpha Satellite centromeric 0 668 1 1055 156 3 0 chr2 181882990 181884336 -68803518 - ALR/Alpha Satellite centromeric 0 1349 1 955 170 9 0 chr2 181884349 181885011 -68802843 - ALR/Alpha Satellite centromeric 0 668 1 1066 154 2 0 chr2 181885024 181886371 -68801483 - ALR/Alpha Satellite centromeric 0 1349 1 957 170 9 0 chr2 181886384 181887046 -68800808 - ALR/Alpha Satellite centromeric 0 668 1 1073 155 2 0 chr2 181887059 181888748 -68799106 - ALR/Alpha Satellite centromeric 0 1691 1 957 171 9 0 chr2 181888761 181889423 -68798431 - ALR/Alpha Satellite centromeric 0 667 1 1068 154 2 0 chr2 181889436 181890783 -68797071 - ALR/Alpha Satellite centromeric 0 1349 1 954 167 9 0 chr2 181890796 181891458 -68796396 - ALR/Alpha Satellite centromeric 0 668 1 1058 153 2 0 chr2 181891471 181892818 -68795036 - ALR/Alpha Satellite centromeric 0 1349 1 957 170 9 0 chr2 181892831 181893493 -68794361 - ALR/Alpha Satellite centromeric 0 668 1 1073 154 2 0 chr2 181893506 181894853 -68793001 - ALR/Alpha Satellite centromeric 0 1349 1 957 169 9 0 chr2 181894866 181895528 -68792326 - ALR/Alpha Satellite centromeric 0 668 1 1066 155 2 0 chr2 181895541 181896888 -68790966 - ALR/Alpha Satellite centromeric 0 1349 1 957 171 9 0 chr2 181896901 181897563 -68790291 - ALR/Alpha Satellite centromeric 0 668 1 1068 157 3 0 chr2 181897576 181898923 -68788931 - ALR/Alpha Satellite centromeric 0 1350 1 954 169 9 0 chr2 181898936 181899598 -68788256 - ALR/Alpha Satellite centromeric 0 668 1 1066 155 2 0 chr2 181899611 181900958 -68786896 - ALR/Alpha Satellite centromeric 0 1349 1 1073 158 3 1 chr2 181900971 181903335 -68784519 - ALR/Alpha Satellite centromeric 0 2370 1 997 165 4 0 chr2 181903348 181904647 -68783207 - ALR/Alpha Satellite centromeric 0 1304 1 985 172 9 0 chr2 181904660 181905660 -68782194 - ALR/Alpha Satellite centromeric 0 1008 1 1066 154 2 0 chr2 181905673 181907020 -68780834 - ALR/Alpha Satellite centromeric 0 1349 1 957 171 9 0 chr2 181907033 181907695 -68780159 - ALR/Alpha Satellite centromeric 0 667 1 1066 156 2 0 chr2 181907708 181909055 -68778799 - ALR/Alpha Satellite centromeric 0 1349 1 957 175 8 1 chr2 181909068 181909730 -68778124 - ALR/Alpha Satellite centromeric 0 666 1 987 163 13 0 chr2 181909743 181910260 -68777594 - ALR/Alpha Satellite centromeric 0 523 1 4590 126 38 49 chr2 182010569 182011432 -68676422 + Tigger1 DNA MER2_type 2 855 -1563 324 64 0 0 chr2 182012072 182012119 -68675735 + (CA)n Simple_repeat Simple_repeat 2 48 0 231 300 71 0 chr2 182012437 182012507 -68675347 - L2 LINE L2 0 3272 3198 194 284 200 0 chr2 182013286 182013381 -68674473 + L2 LINE L2 3200 3313 0 420 222 33 62 chr2 182015252 182015391 -68672463 + MIR3 SINE MIR 63 200 -8 2577 66 0 3 chr2 182018071 182018376 -68669478 - AluY SINE Alu -7 304 1 269 312 52 0 chr2 182018951 182019028 -68668826 - MIR3 SINE MIR -54 154 74 21 0 0 0 chr2 182019053 182019074 -68668780 + AT_rich Low_complexity Low_complexity 1 21 0 260 196 52 10 chr2 182019503 182019600 -68668254 + (TA)n Simple_repeat Simple_repeat 1 101 0 250 350 38 0 chr2 182020587 182020667 -68667187 - MIR3 SINE MIR -30 178 96 468 308 58 23 chr2 182020988 182021160 -68666694 + MIR3 SINE MIR 20 197 -11 2225 129 55 30 chr2 182021492 182021894 -68665960 - Tigger1 DNA MER2_type 0 2418 2007 3130 103 17 2 chr2 182021907 182022375 -68665479 - Tigger1 DNA MER2_type -1643 775 301 309 336 59 19 chr2 182022554 182022930 -68664924 + MLT1L LTR MaLR 15 424 -164 1089 88 5 98 chr2 182023000 182023215 -68664639 - L1MA4A LINE L1 0 6303 6109 580 183 36 15 chr2 182023217 182023354 -68664500 - Tigger1 DNA MER2_type -2102 316 177 314 146 0 0 chr2 182023349 182023397 -68664457 - Tigger1 DNA MER2_type -2370 48 1 * 440 280 85 47 chr2 182024513 182024831 -68663023 - L3b LINE CR1 -146 1437 1108 348 202 73 40 chr2 182025105 182025229 -68662625 - HAL1 LINE L1 -127 2380 2253 21 57 0 0 chr2 182025443 182025478 -68662376 + AT_rich Low_complexity Low_complexity 1 35 0 266 87 22 0 chr2 182025789 182025835 -68662019 - MADE1 DNA Mariner -33 47 1 189 94 0 0 chr2 182025869 182025901 -68661953 + (GA)n Simple_repeat Simple_repeat 2 33 0 230 337 43 43 chr2 182026086 182026273 -68661581 + L2 LINE L2 3119 3305 -8 239 175 12 38 chr2 182026734 182026814 -68661040 + CT-rich Low_complexity Low_complexity 4 81 0 252 213 0 0 chr2 182026886 182026947 -68660907 + CT-rich Low_complexity Low_complexity 1 61 0 1703 176 0 24 chr2 182026947 182027237 -68660617 - AluJo SINE Alu -29 283 1 1122 78 0 0 chr2 182027314 182027468 -68660386 + (GGAA)n Simple_repeat Simple_repeat 2 155 0 368 291 36 0 chr2 182028320 182028430 -68659424 + MIR SINE MIR 35 148 -114 23 86 0 0 chr2 182033694 182033752 -68654102 + AT_rich Low_complexity Low_complexity 1 58 0 220 294 157 29 chr2 182036434 182036536 -68651318 + L2 LINE L2 3154 3268 -4 191 366 99 0 chr2 182036517 182036618 -68651236 - L2 LINE L2 0 3272 3162 * 635 235 84 33 chr2 182038080 182038293 -68649561 - MIR SINE MIR -19 243 20 223 318 0 24 chr2 182038713 182038798 -68649056 + GA-rich Low_complexity Low_complexity 5 87 0 428 211 117 7 chr2 182038895 182039034 -68648820 + MIR SINE MIR 16 166 -67 252 211 0 0 chr2 182039065 182039117 -68648737 - L1MA10 LINE L1 -3 6331 6280 255 280 80 20 chr2 182039417 182039517 -68648337 - L2 LINE L2 -3 3310 3205 1951 5 18 9 chr2 182041240 182041457 -68646397 - AluYa5 SINE Alu -10 301 83 598 246 51 29 chr2 182042191 182042366 -68645488 + MIR SINE MIR 47 225 -37 403 118 73 0 chr2 182042714 182042782 -68645072 - L2 LINE L2 -4 3309 3237 773 265 32 9 chr2 182042810 182043029 -68644825 - MIR SINE MIR -37 225 2 240 35 0 0 chr2 182045329 182045358 -68642496 + (T)n Simple_repeat Simple_repeat 1 29 0 32 43 0 0 chr2 182046048 182046094 -68641760 + GC_rich Low_complexity Low_complexity 1 46 0 252 0 0 0 chr2 182046128 182046156 -68641698 + (T)n Simple_repeat Simple_repeat 1 28 0 26 30 0 0 chr2 182048303 182048336 -68639518 + AT_rich Low_complexity Low_complexity 1 33 0 2860 10 0 0 chr2 182051283 182051593 -68636261 + AluYa5 SINE Alu 1 310 -1 365 347 54 6 chr2 182054105 182054272 -68633582 + MIR SINE MIR 46 220 -42 1291 155 0 44 chr2 182054540 182054766 -68633088 - AluJo SINE Alu -12 300 85 485 156 10 0 chr2 182055455 182055551 -68632303 + GA-rich Low_complexity Low_complexity 4 100 0 195 42 0 0 chr2 182056803 182056827 -68631027 + (T)n Simple_repeat Simple_repeat 1 24 0 4005 139 42 16 chr2 182056901 182057576 -68630278 - L1MC1 LINE L1 -1 6332 5641 189 0 0 0 chr2 182057661 182057682 -68630172 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 870 281 77 42 chr2 182057715 182058117 -68629737 - L2 LINE L2 -67 3246 2831 7565 55 2 2 chr2 182059090 182060320 -68627534 - L1PA7 LINE L1 -3 6151 4918 11928 77 10 16 chr2 182060320 182061960 -68625894 + L1PA7 LINE L1 3284 4913 -1233 2148 123 10 0 chr2 182062234 182062534 -68625320 - AluSx SINE Alu -9 303 1 234 250 0 0 chr2 182064414 182064462 -68623392 + (TG)n Simple_repeat Simple_repeat 1 48 0 331 317 251 0 chr2 182064707 182064874 -68622980 + MIR SINE MIR 41 249 -13 276 231 46 0 chr2 182066028 182066093 -68621761 + MIR SINE MIR 89 156 -106 469 202 42 17 chr2 182066621 182066740 -68621114 - MER94 DNA DNA -3 131 10 1456 146 0 30 chr2 182067049 182067282 -68620572 + AluJb SINE Alu 1 226 -86 1758 153 0 62 chr2 182067388 182067695 -68620159 - AluJo SINE Alu -24 288 1 21 0 0 0 chr2 182067695 182067716 -68620138 + AT_rich Low_complexity Low_complexity 1 21 0 212 268 42 0 chr2 182067951 182068022 -68619832 - L2 LINE L2 -214 3058 2985 2645 132 62 5 chr2 182068137 182068540 -68619314 + MSTB LTR MaLR 1 426 0 1400 192 49 0 chr2 182068635 182068943 -68618911 - MER33 DNA MER1_type -1 323 1 207 250 0 0 chr2 182069483 182069527 -68618327 + MIR SINE MIR 110 153 -109 444 145 26 0 chr2 182070612 182070688 -68617166 + MLT1J LTR MaLR 103 180 -331 625 271 42 21 chr2 182070739 182070931 -68616923 + MLT1J2 LTR MaLR 248 443 -7 212 149 21 0 chr2 182071078 182071125 -68616729 + GA-rich Low_complexity Low_complexity 4 51 0 35 54 0 0 chr2 182073358 182073414 -68614440 + AT_rich Low_complexity Low_complexity 1 56 0 513 136 36 36 chr2 182073414 182073524 -68614330 + L1MB7 LINE L1 6074 6183 -1 247 189 179 63 chr2 182074160 182074255 -68613599 - MER5C DNA MER1_type -1 323 218 4923 136 67 23 chr2 182074256 182074814 -68613040 + L1MA6 LINE L1 5346 5961 -339 2581 50 0 0 chr2 182074814 182075116 -68612738 + AluY SINE Alu 1 302 -9 4923 136 67 23 chr2 182075116 182075470 -68612384 + L1MA6 LINE L1 5961 6298 -2 338 183 258 0 chr2 182076233 182076326 -68611528 - MER5C DNA MER1_type -200 124 8 343 357 56 0 chr2 182076437 182076563 -68611291 + L3 LINE CR1 569 701 -876 399 286 44 84 chr2 182076570 182076797 -68611057 - MIR SINE MIR -11 251 34 349 323 37 26 chr2 182076821 182077010 -68610844 + L3 LINE CR1 702 892 -685 1984 137 0 3 chr2 182077061 182077346 -68610508 - AluSx SINE Alu -28 284 1 1859 167 101 0 chr2 182077395 182077701 -68610153 + MER1B DNA MER1_type 1 337 0 500 147 0 11 chr2 182077780 182077875 -68609979 + (TTCTCC)n Simple_repeat Simple_repeat 3 96 0 2105 136 36 57 chr2 182077877 182078052 -68609802 - L1MA10 LINE L1 -10 6324 6147 203 79 26 0 chr2 182078052 182078090 -68609764 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2105 136 36 57 chr2 182078090 182078303 -68609551 - L1MA10 LINE L1 -187 6147 5944 687 191 111 0 chr2 182078303 182078492 -68609362 + L1 LINE L1 3006 3215 -2931 571 122 226 26 chr2 182078492 182078607 -68609247 + MER1B DNA MER1_type 159 296 -43 870 155 75 0 chr2 182078628 182078802 -68609052 + L1 LINE L1 3223 3409 -2737 241 279 135 56 chr2 182078931 182079146 -68608708 + LTR16C LTR ERVL 260 491 0 226 320 77 0 chr2 182079146 182079224 -68608630 + L3 LINE CR1 878 961 -616 266 263 0 25 chr2 182079224 182079304 -68608550 + GA-rich Low_complexity Low_complexity 2 79 0 242 313 141 39 chr2 182079787 182079915 -68607939 + MIR3 SINE MIR 13 153 -55 479 175 84 70 chr2 182080080 182080159 -68607695 + MER5A DNA MER1_type 42 125 -64 2109 152 0 0 chr2 182080159 182080469 -68607385 - AluSx SINE Alu -2 310 1 479 175 84 70 chr2 182080469 182080532 -68607322 + MER5A DNA MER1_type 125 186 -3 30 0 0 0 chr2 182080830 182080860 -68606994 + AT_rich Low_complexity Low_complexity 1 30 0 301 335 43 43 chr2 182084019 182084183 -68603671 + MIR SINE MIR 99 262 0 2214 147 163 0 chr2 182084734 182085102 -68602752 - MSTA LTR MaLR 0 428 1 412 213 137 82 chr2 182088842 182089025 -68598829 - MLT1J LTR MaLR -18 493 301 414 275 18 28 chr2 182089466 182089575 -68598279 + MIR SINE MIR 23 130 -78 934 270 150 15 chr2 182089630 182090161 -68597693 + L2 LINE L2 2713 3313 0 383 277 163 35 chr2 182091285 182091487 -68596367 - MIR SINE MIR -1 261 34 702 241 0 0 chr2 182091487 182091628 -68596226 - MER63A DNA MER1_type -13 197 57 190 288 113 12 chr2 182092026 182092106 -68595748 - MIR3 SINE MIR -7 201 114 215 372 0 13 chr2 182093474 182093552 -68594302 - L2 LINE L2 -557 2757 2681 372 237 30 76 chr2 182093568 182093766 -68594088 + MER113 DNA MER1_type? 2 190 -331 1026 138 0 19 chr2 182093777 182093937 -68593917 + FRAM SINE Alu 12 168 -8 294 50 0 0 chr2 182096875 182096915 -68590939 + (TG)n Simple_repeat Simple_repeat 2 41 0 604 214 23 38 chr2 182097144 182097275 -68590579 + MIR SINE MIR 44 172 -90 546 199 70 29 chr2 182097297 182097468 -68590386 - MIR SINE MIR -43 219 42 764 263 30 42 chr2 182097793 182098055 -68589799 + MIR SINE MIR 3 261 -1 300 111 0 0 chr2 182099142 182099187 -68588667 + (TA)n Simple_repeat Simple_repeat 2 46 0 2898 150 29 29 chr2 182099392 182099755 -68588099 + L1MA9 LINE L1 5800 6165 -147 204 67 0 0 chr2 182099755 182099785 -68588069 + (CA)n Simple_repeat Simple_repeat 1 30 0 2898 150 29 29 chr2 182099785 182099934 -68587920 + L1MA9 LINE L1 6164 6312 0 664 274 55 20 chr2 182100211 182100412 -68587442 - MER63A DNA MER1_type 0 210 3 184 278 196 10 chr2 182103179 182103276 -68584578 - MIR SINE MIR -44 218 104 215 196 0 89 chr2 182103961 182104017 -68583837 + MIR3 SINE MIR 140 190 -18 200 273 0 18 chr2 182104663 182104718 -68583136 - L2 LINE L2 -47 3266 3213 685 220 21 0 chr2 182105203 182105344 -68582510 + Charlie4 DNA MER1_type 1818 1961 0 547 327 50 20 chr2 182105660 182106006 -68581848 + MLT1L LTR MaLR 114 535 -80 4051 45 2 0 chr2 182106354 182106817 -68581037 + L1PA5 LINE L1 5689 6152 -2 192 239 147 37 chr2 182106997 182107106 -68580748 + L2 LINE L2 3143 3263 -9 250 285 159 34 chr2 182108056 182108351 -68579503 - L1MD1 LINE L1 -285 5957 5626 354 221 52 0 chr2 182108356 182108433 -68579421 + MER94 DNA DNA 1 81 -53 252 357 48 12 chr2 182108499 182108667 -68579187 - L1MD1 LINE L1 -2179 5606 5433 251 283 3 0 chr2 182108720 182108817 -68579037 - L1P LINE L1 -807 5339 5241 31 0 0 0 chr2 182108936 182108967 -68578887 + AT_rich Low_complexity Low_complexity 1 31 0 276 143 36 18 chr2 182109148 182109204 -68578650 - MER5A DNA MER1_type -100 89 33 252 313 104 0 chr2 182109264 182109360 -68578494 - MIR3 SINE MIR -12 196 91 2067 120 3 3 chr2 182112145 182112436 -68575418 + AluSx SINE Alu 5 295 -17 26 64 0 0 chr2 182112481 182112528 -68575326 + AT_rich Low_complexity Low_complexity 1 47 0 25 31 0 0 chr2 182112930 182112962 -68574892 + AT_rich Low_complexity Low_complexity 1 32 0 409 137 14 0 chr2 182113571 182113644 -68574210 - MER116 DNA Mariner 0 80 7 389 261 52 37 chr2 182113717 182113851 -68574003 + MIR SINE MIR 58 193 -69 206 237 204 0 chr2 182114557 182114650 -68573204 - MIR SINE MIR -28 234 123 400 335 50 6 chr2 182116816 182116998 -68570856 - MIR SINE MIR -50 212 23 341 136 15 0 chr2 182118827 182118893 -68568961 + (TG)n Simple_repeat Simple_repeat 1 67 0 185 339 0 0 chr2 182119597 182119653 -68568201 - MIR SINE MIR -56 152 97 212 0 36 0 chr2 182119655 182119683 -68568171 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 254 299 39 50 chr2 182121201 182121455 -68566399 - L2 LINE L2 -282 2990 2743 2152 108 3 10 chr2 182121502 182121808 -68566046 + AluSg SINE Alu 1 304 -6 349 231 135 0 chr2 182124261 182124365 -68563489 + MER103 DNA DNA 4 121 -45 387 0 0 0 chr2 182125006 182125049 -68562805 + (CA)n Simple_repeat Simple_repeat 1 43 0 291 28 0 0 chr2 182125048 182125084 -68562770 + (TC)n Simple_repeat Simple_repeat 2 37 0 * 21 0 0 0 chr2 182125735 182125756 -68562098 + AT_rich Low_complexity Low_complexity 1 21 0 186 229 73 92 chr2 182126354 182126438 -68561416 + L2 LINE L2 2998 3081 -232 189 0 0 0 chr2 182126438 182126459 -68561395 + (CA)n Simple_repeat Simple_repeat 1 21 0 186 229 73 92 chr2 182126459 182126483 -68561371 + L2 LINE L2 3081 3104 -209 1322 180 78 58 chr2 182126521 182126816 -68561038 - AluJo SINE Alu -5 307 7 618 191 25 68 chr2 182126837 182126999 -68560855 + L2 LINE L2 3159 3313 0 290 316 18 44 chr2 182127031 182127145 -68560709 + Tigger8 DNA MER2_type 554 664 -2 1607 123 20 16 chr2 182127249 182127493 -68560361 - MER1B DNA MER1_type 0 339 135 208 227 18 18 chr2 182127880 182127943 -68559911 - MIR SINE MIR -77 131 68 263 331 123 12 chr2 182128279 182128442 -68559412 - MIR3 SINE MIR -27 181 1 2239 99 62 22 chr2 182128882 182129206 -68558648 + MER1B DNA MER1_type 1 337 0 1519 209 36 0 chr2 182129435 182129742 -68558112 + L1MD2 LINE L1 6027 6344 -15 21 36 0 0 chr2 182129819 182129847 -68558007 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 182130026 182130050 -68557804 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 182131549 182131572 -68556282 + AT_rich Low_complexity Low_complexity 1 23 0 716 276 16 16 chr2 182131584 182131776 -68556078 - MIR SINE MIR -5 257 66 3019 153 35 40 chr2 182132762 182133280 -68554574 - MLT2B2 LTR ERVL 0 515 1 1419 206 59 45 chr2 182133660 182134034 -68553820 + MLT1B LTR MaLR 1 379 -11 406 334 65 71 chr2 182134085 182134423 -68553431 - L2 LINE L2 -85 3187 2852 * 618 316 33 35 chr2 182134410 182134777 -68553077 - L2 LINE L2 -579 2735 2370 962 333 140 20 chr2 182135484 182136242 -68551612 - L2 LINE L2 -680 2634 1786 1276 183 40 77 chr2 182137030 182137379 -68550475 + MER46C DNA MER2_type 3 338 0 295 292 54 30 chr2 182137918 182138066 -68549788 - MIR SINE MIR -61 147 12 183 167 0 28 chr2 182138709 182138745 -68549109 - L3b LINE CR1 -18 1565 1531 273 57 0 0 chr2 182139235 182139270 -68548584 + (CA)n Simple_repeat Simple_repeat 2 36 0 643 313 172 41 chr2 182141563 182142074 -68545780 + MLT1K LTR MaLR 2 579 -9 1779 162 50 23 chr2 182142832 182143134 -68544720 - AluJo SINE Alu 0 312 3 189 0 0 0 chr2 182143169 182143190 -68544664 + (A)n Simple_repeat Simple_repeat 1 21 0 2087 109 0 7 chr2 182143232 182143547 -68544307 - AluY SINE Alu 0 313 1 201 74 0 0 chr2 182143615 182143642 -68544212 + (A)n Simple_repeat Simple_repeat 1 27 0 504 200 0 0 chr2 182143805 182143910 -68543944 + CT-rich Low_complexity Low_complexity 2 106 0 375 312 43 0 chr2 182143989 182144127 -68543727 - MIR3 SINE MIR -25 183 40 486 288 74 23 chr2 182145468 182145684 -68542170 - MLT1J2 LTR MaLR -188 258 33 2229 112 0 10 chr2 182146144 182146456 -68541398 - AluSc SINE Alu 0 309 1 414 0 0 0 chr2 182146546 182146592 -68541262 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 441 0 0 0 chr2 182146591 182146640 -68541214 + (GA)n Simple_repeat Simple_repeat 2 50 0 1662 173 3 55 chr2 182147337 182147649 -68540205 - AluJb SINE Alu -16 296 1 280 235 39 47 chr2 182148965 182149093 -68538761 + MIR SINE MIR 23 148 -67 2152 103 7 3 chr2 182150224 182150514 -68537340 + AluSq SINE Alu 1 291 -22 240 259 0 17 chr2 182154916 182154974 -68532880 - L3 LINE CR1 -7 1570 1514 183 191 44 15 chr2 182155470 182155538 -68532316 + GA-rich Low_complexity Low_complexity 6 75 0 1129 156 50 0 chr2 182156186 182156366 -68531488 + MER5A DNA MER1_type 1 189 0 233 254 0 0 chr2 182156706 182156765 -68531089 - Charlie8 DNA MER1_type -2267 150 92 23 78 0 0 chr2 182158187 182158238 -68529616 + AT_rich Low_complexity Low_complexity 1 51 0 2318 74 0 0 chr2 182158267 182158571 -68529283 + AluY SINE Alu 1 304 0 249 329 52 114 chr2 182158678 182159003 -68528851 - L2 LINE L2 -17 3255 2951 22 0 0 0 chr2 182160489 182160511 -68527343 + AT_rich Low_complexity Low_complexity 1 22 0 683 272 17 11 chr2 182162010 182162190 -68525664 - MER5A DNA MER1_type -6 183 3 26 50 0 0 chr2 182163266 182163306 -68524548 + AT_rich Low_complexity Low_complexity 1 40 0 448 285 87 62 chr2 182163632 182163920 -68523934 + L1ME1 LINE L1 446 740 -5379 2249 98 0 7 chr2 182164707 182165012 -68522842 + AluY SINE Alu 1 303 -8 393 250 33 0 chr2 182166220 182166312 -68521542 + L1ME1 LINE L1 4243 4337 -1792 384 144 44 44 chr2 182166319 182166409 -68521445 - L1MA10 LINE L1 -4 6330 6241 362 215 13 25 chr2 182166428 182166507 -68521347 - L1MA10 LINE L1 -81 6253 6176 318 255 85 28 chr2 182166562 182166668 -68521186 - L1MEc LINE L1 -5168 1228 1117 1088 148 0 17 chr2 182166668 182166844 -68521010 - AluSg/x SINE Alu -3 307 135 1003 227 104 8 chr2 182166849 182167109 -68520745 - L1MEc LINE L1 -6075 321 37 1236 199 31 71 chr2 182167112 182167176 -68520678 + L1ME1 LINE L1 4333 4398 -1731 1524 167 16 0 chr2 182167176 182167427 -68520427 + AluJb SINE Alu 1 255 -57 1236 199 31 71 chr2 182167427 182167785 -68520069 + L1ME1 LINE L1 4398 4738 -1391 647 248 16 0 chr2 182167785 182167910 -68519944 + FLAM_A SINE Alu 1 127 -15 1616 223 27 7 chr2 182167934 182168338 -68519516 + L1ME1 LINE L1 4733 5144 -985 1915 172 24 42 chr2 182168339 182168763 -68519091 + LTR52 LTR ERVL 1 416 -5 2921 211 57 28 chr2 182168765 182169523 -68518331 + L1ME1 LINE L1 5142 5905 -244 5396 102 29 87 chr2 182169540 182170508 -68517346 - Tigger3b DNA MER2_type -51 1180 269 403 225 135 0 chr2 182170502 182170591 -68517263 - Tigger3b DNA MER2_type -1129 102 2 * 677 220 64 12 chr2 182170619 182170792 -68517062 + L1ME1 LINE L1 5966 6147 -2 643 186 0 0 chr2 182170869 182170971 -68516883 + Tigger3b DNA MER2_type 1 102 -1129 * 5591 124 54 6 chr2 182170969 182171205 -68516649 + Tigger3b DNA MER2_type 274 497 -2531 423 38 0 0 chr2 182171205 182171258 -68516596 + (TG)n Simple_repeat Simple_repeat 2 54 0 5591 124 54 6 chr2 182171258 182171935 -68515919 + Tigger3b DNA MER2_type 497 1231 0 189 284 0 60 chr2 182172001 182172068 -68515786 - MIR SINE MIR -88 120 58 1693 205 42 22 chr2 182172165 182172521 -68515333 - MLT1A1 LTR MaLR -2 363 1 3481 101 16 0 chr2 182172930 182173376 -68514478 + MLT2A2 LTR ERVL 1 453 0 249 281 108 76 chr2 182174793 182174978 -68512876 - MIR3 SINE MIR 0 208 18 378 279 93 14 chr2 182175244 182175384 -68512470 - L2 LINE L2 0 3313 3163 266 164 55 41 chr2 182175453 182175526 -68512328 - MER4-int LTR ERV1 -5423 1175 1102 2425 170 78 23 chr2 182175795 182176272 -68511582 + MLT1D LTR MaLR 1 503 -2 297 152 0 0 chr2 182176331 182176377 -68511477 + MLT1B LTR MaLR 144 189 -201 1890 162 30 65 chr2 182177404 182177594 -68510260 + MLT1B LTR MaLR 1 171 -219 2080 111 7 27 chr2 182177594 182177892 -68509962 + AluSx SINE Alu 1 292 -20 1890 162 30 65 chr2 182177892 182178103 -68509751 + MLT1B LTR MaLR 171 388 -2 482 265 26 74 chr2 182178250 182178439 -68509415 - MIR3 SINE MIR -8 200 21 435 311 0 0 chr2 182179355 182179458 -68508396 + MER5A DNA MER1_type 7 109 -80 284 323 52 45 chr2 182180298 182180453 -68507401 + MIR SINE MIR 57 212 -50 270 236 0 0 chr2 182182014 182182069 -68505785 - L2 LINE L2 -1 3312 3258 215 305 49 0 chr2 182182067 182182149 -68505705 + MIR SINE MIR 118 203 -59 * 224 149 21 0 chr2 182182154 182182201 -68505653 + (TATATG)n Simple_repeat Simple_repeat 5 52 0 391 307 99 25 chr2 182184669 182184871 -68502983 - MIR SINE MIR -14 248 32 1861 148 3 3 chr2 182186516 182186799 -68501055 - AluJb SINE Alu -16 296 14 186 315 0 0 chr2 182186914 182186968 -68500886 - MIR SINE MIR -134 128 75 2284 91 0 7 chr2 182187028 182187325 -68500529 + AluSc SINE Alu 1 295 -14 764 195 26 89 chr2 182188601 182188791 -68499063 + MER5B DNA MER1_type 1 178 0 970 184 0 0 chr2 182189730 182189888 -68497966 + FRAM SINE Alu 4 161 -15 208 320 31 31 chr2 182190719 182190816 -68497038 - L3 LINE CR1 -2 1575 1479 387 0 0 0 chr2 182192266 182192309 -68495545 + (CA)n Simple_repeat Simple_repeat 2 44 0 611 321 42 6 chr2 182192434 182192602 -68495252 + MER91A DNA MER1_type 1 174 -22 312 27 0 0 chr2 182192949 182192986 -68494868 + (CA)n Simple_repeat Simple_repeat 2 38 0 215 358 8 33 chr2 182193456 182193576 -68494278 - MIR SINE MIR -87 175 59 339 346 73 29 chr2 182194606 182194921 -68492933 - L1M2 LINE L1 -5486 1363 1035 238 260 146 31 chr2 182195816 182195912 -68491942 + MIR3 SINE MIR 85 191 -17 7331 57 10 0 chr2 182197263 182198884 -68488970 + L1PA7 LINE L1 4514 6143 -11 200 262 0 0 chr2 182199345 182199387 -68488467 + CT-rich Low_complexity Low_complexity 5 46 0 1434 143 0 18 chr2 182199783 182200007 -68487847 + AluJb SINE Alu 84 303 -9 195 42 0 0 chr2 182203558 182203582 -68484272 + (CA)n Simple_repeat Simple_repeat 1 24 0 284 248 51 80 chr2 182203935 182204072 -68483782 + MIR SINE MIR 84 216 -46 825 305 116 24 chr2 182204098 182204478 -68483376 + L2 LINE L2 2245 2659 -655 1773 163 6 44 chr2 182204637 182204956 -68482898 + AluJb SINE Alu 3 309 -3 592 128 37 18 chr2 182206624 182206733 -68481121 - L1PA11 LINE L1 0 6174 6064 205 154 0 77 chr2 182206885 182206937 -68480917 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 340 300 56 19 chr2 182207715 182207875 -68479979 - LTR16C LTR ERVL -64 427 262 2044 124 14 0 chr2 182207891 182208174 -68479680 + AluSx SINE Alu 6 292 -20 274 382 61 8 chr2 182208852 182208983 -68478871 + MER91A DNA MER1_type 15 152 -44 679 240 4 83 chr2 182209777 182210006 -68477848 - L1 LINE L1 -1877 4269 4059 4305 25 6 2 chr2 182210006 182210487 -68477367 + L1PA2 LINE L1 5672 6154 -1 382 279 0 9 chr2 182210679 182210790 -68477064 - LTR16C LTR ERVL -48 443 334 319 304 43 9 chr2 182210905 182211020 -68476834 - MER5A DNA MER1_type 0 189 71 1932 97 11 7 chr2 182211159 182211428 -68476426 - AluSp SINE Alu -43 270 1 324 235 59 104 chr2 182211684 182211826 -68476028 - L1MB2 LINE L1 -6 6165 6035 2348 81 0 3 chr2 182211826 182212122 -68475732 + AluSq SINE Alu 1 295 -18 324 235 59 104 chr2 182212122 182212200 -68475654 - L1MB2 LINE L1 -136 6035 5955 1237 125 49 0 chr2 182212592 182212776 -68475078 - AluSq SINE Alu -120 193 1 247 262 10 99 chr2 182212776 182212978 -68474876 - L1 LINE L1 -3014 3132 2949 1136 242 14 26 chr2 182212980 182214199 -68473655 - BSR/Beta Satellite Satellite -1 1204 1 3927 70 4 2 chr2 182214299 182214816 -68473038 + L1P LINE L1 1418 1935 -4211 23 0 0 0 chr2 182214932 182214955 -68472899 + AT_rich Low_complexity Low_complexity 1 23 0 1696 209 58 10 chr2 182215156 182215549 -68472305 + L1PA16 LINE L1 5692 6105 -61 2150 173 20 6 chr2 182216287 182216645 -68471209 - MLT1A1 LTR MaLR -2 363 1 1752 188 3 7 chr2 182216995 182217293 -68470561 + AluJo SINE Alu 1 297 -15 225 171 0 24 chr2 182217334 182217375 -68470479 - L2 LINE L2 -12 3301 3262 1883 159 31 3 chr2 182217376 182217697 -68470157 + THE1B LTR MaLR 6 335 -29 974 239 108 75 chr2 182217994 182218762 -68469092 + L2 LINE L2 2529 3313 0 3848 230 118 31 chr2 182219528 182220651 -68467203 - MER69B DNA AcHobo -4 1222 2 189 0 0 0 chr2 182221170 182221191 -68466663 + (GGAA)n Simple_repeat Simple_repeat 4 24 0 354 200 35 12 chr2 182222217 182222302 -68465552 - MIR SINE MIR -92 170 84 1752 166 10 16 chr2 182223311 182223619 -68464235 + AluSx SINE Alu 2 307 -5 347 261 135 9 chr2 182223901 182224012 -68463842 - MER63 DNA MER1_type -311 751 1 279 246 284 45 chr2 182224214 182224348 -68463506 + MIR SINE MIR 19 184 -78 2187 118 0 6 chr2 182224740 182225053 -68462801 - AluSx SINE Alu -1 311 1 387 277 30 10 chr2 182225436 182225537 -68462317 + MIR SINE MIR 50 152 -110 613 208 48 18 chr2 182225912 182226086 -68461768 - MER69 DNA AcHobo -2 2524 1 259 333 81 0 chr2 182226088 182226175 -68461679 - L2 LINE L2 -30 3242 3149 189 281 35 18 chr2 182226430 182226487 -68461367 - MIR SINE MIR -62 146 89 250 272 25 12 chr2 182228099 182228180 -68459674 + L1ME LINE L1 5646 5727 -394 369 262 130 49 chr2 182228480 182228850 -68459004 + L1ME4a LINE L1 5198 5614 -548 306 128 93 93 chr2 182228875 182228961 -68458893 - MIR SINE MIR -12 250 165 * 317 273 45 11 chr2 182228959 182229047 -68458807 - MER91C DNA MER1_type -19 121 31 359 244 12 0 chr2 182229057 182229139 -68458715 - MIR SINE MIR -93 169 87 216 135 0 0 chr2 182229176 182229213 -68458641 + (A)n Simple_repeat Simple_repeat 1 37 0 764 176 169 0 chr2 182229214 182229356 -68458498 + MER63A DNA MER1_type 43 208 -2 475 294 56 50 chr2 182229532 182229692 -68458162 - L2 LINE L2 0 3272 3112 269 222 237 15 chr2 182229881 182230079 -68457775 + L1ME4a LINE L1 5880 6121 0 437 311 8 8 chr2 182231881 182232003 -68455851 - MLT1J1 LTR MaLR -308 138 17 374 22 0 0 chr2 182233089 182233135 -68454719 - MADE1 DNA Mariner 0 80 35 338 269 87 34 chr2 182233141 182233290 -68454564 - MIR SINE MIR -81 181 25 396 232 182 71 chr2 182233521 182233719 -68454135 + L2 LINE L2 2538 2757 -557 1229 152 0 0 chr2 182233721 182233905 -68453949 + L1MB8 LINE L1 5423 5606 -572 2710 181 55 9 chr2 182233991 182234522 -68453332 + L1MB8 LINE L1 5619 6173 -5 324 178 0 55 chr2 182234537 182234610 -68453244 + L2 LINE L2 3245 3313 0 444 323 19 25 chr2 182235252 182235413 -68452441 + MIR SINE MIR 52 211 -51 608 232 28 17 chr2 182235517 182235694 -68452160 + MIR SINE MIR 14 192 -70 765 216 96 0 chr2 182236328 182236495 -68451359 - MER5A DNA MER1_type -3 186 4 21 0 0 0 chr2 182237493 182237514 -68450340 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 182238249 182238271 -68449583 + AT_rich Low_complexity Low_complexity 1 22 0 549 289 90 33 chr2 182238689 182238900 -68448954 - MIR SINE MIR -33 229 7 215 309 0 0 chr2 182238983 182239038 -68448816 + MIR SINE MIR 201 255 -7 414 302 52 17 chr2 182239135 182239307 -68448547 + MIR SINE MIR 59 236 -26 2223 104 10 0 chr2 182240115 182240404 -68447450 - AluSx SINE Alu -20 292 1 267 332 107 58 chr2 182240764 182240969 -68446885 - L2 LINE L2 -17 3255 3041 1732 121 73 0 chr2 182241162 182241435 -68446419 + AluSq SINE Alu 1 293 -20 200 288 55 0 chr2 182241454 182241527 -68446327 - L2 LINE L2 -553 2761 2685 1257 264 81 35 chr2 182241703 182242176 -68445678 + MLT1H LTR MaLR 13 546 -3 183 273 0 0 chr2 182243432 182243476 -68444378 + L2 LINE L2 3269 3312 -1 333 188 0 0 chr2 182243478 182243558 -68444296 + (TGAA)n Simple_repeat Simple_repeat 3 82 0 22 0 0 0 chr2 182244040 182244062 -68443792 + AT_rich Low_complexity Low_complexity 1 22 0 264 151 0 110 chr2 182244891 182244964 -68442890 - MLT1K LTR MaLR -343 245 181 22 0 0 0 chr2 182245162 182245184 -68442670 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr2 182245336 182245371 -68442483 + AT_rich Low_complexity Low_complexity 1 35 0 678 260 55 31 chr2 182245852 182246106 -68441748 - MLT1J LTR MaLR -230 281 22 238 192 0 19 chr2 182246187 182246239 -68441615 - MER69 DNA AcHobo 0 2526 2476 566 196 14 42 chr2 182246277 182246420 -68441434 - MER69 DNA AcHobo -1079 147 9 185 205 0 0 chr2 182246803 182246842 -68441012 + MIR SINE MIR 110 148 -60 273 57 0 0 chr2 182247238 182247273 -68440581 + (CA)n Simple_repeat Simple_repeat 2 36 0 498 323 36 36 chr2 182247581 182247804 -68440050 - MIR SINE MIR -20 242 20 257 0 30 0 chr2 182248152 182248185 -68439669 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2209 101 9 29 chr2 182249144 182249460 -68438394 - AluSq SINE Alu -3 310 1 2421 147 42 2 chr2 182249528 182249936 -68437918 - MSTB LTR MaLR -2 424 1 382 127 99 0 chr2 182250030 182250101 -68437753 - MER20 DNA MER1_type -1 218 141 720 196 20 0 chr2 182250203 182250351 -68437503 - MER20 DNA MER1_type -68 151 1 380 321 77 23 chr2 182250485 182250706 -68437148 + MIR SINE MIR 20 252 -10 552 242 73 11 chr2 182251624 182251802 -68436052 + MLT1C LTR MaLR 1 189 -278 1472 206 0 7 chr2 182251804 182252080 -68435774 + AluJb SINE Alu 14 287 -25 1014 174 50 82 chr2 182252132 182252414 -68435440 + MLT1C LTR MaLR 187 459 -8 584 288 113 22 chr2 182254912 182255134 -68432720 - MIR SINE MIR 0 262 21 376 271 115 42 chr2 182255207 182255495 -68432359 + L1ME4a LINE L1 5569 5877 -244 951 217 143 76 chr2 182255531 182256023 -68431831 - MLT1G LTR MaLR -12 530 1 23 0 0 0 chr2 182257051 182257074 -68430780 + AT_rich Low_complexity Low_complexity 1 23 0 391 275 102 20 chr2 182257385 182257690 -68430164 + L1M4 LINE L1 3135 3464 -2682 309 236 106 12 chr2 182258012 182258173 -68429681 + Charlie7 DNA MER1_type 2430 2605 -7 1038 278 46 11 chr2 182258173 182258544 -68429310 + L1ME1 LINE L1 5778 6161 -5 360 215 0 0 chr2 182258614 182258693 -68429161 - MLT1I LTR MaLR -17 392 314 449 219 54 73 chr2 182258738 182258787 -68429067 + HAL1 LINE L1 765 813 -1694 2052 129 3 3 chr2 182258787 182259081 -68428773 - AluSx SINE Alu -16 296 3 449 219 54 73 chr2 182259081 182259236 -68428618 + HAL1 LINE L1 813 965 -1542 2557 234 95 64 chr2 182259276 182260531 -68427323 + HAL1 LINE L1 1069 2362 -145 292 329 90 6 chr2 182260760 182260927 -68426927 + MLT1J LTR MaLR 71 251 -260 180 111 0 0 chr2 182261091 182261118 -68426736 + (GAA)n Simple_repeat Simple_repeat 2 28 0 22 0 0 0 chr2 182261185 182261207 -68426647 + AT_rich Low_complexity Low_complexity 1 22 0 594 345 26 0 chr2 182261453 182261674 -68426180 - MIR SINE MIR 0 262 34 809 264 187 20 chr2 182261691 182261905 -68425949 - L1ME4a LINE L1 -14 6107 5930 2902 10 0 0 chr2 182261905 182262219 -68425635 - AluYb8 SINE Alu -4 314 1 809 264 187 20 chr2 182262219 182262591 -68425263 - L1ME4a LINE L1 -191 5930 5423 185 0 40 0 chr2 182263483 182263508 -68424346 + (TGG)n Simple_repeat Simple_repeat 3 28 0 2091 123 74 6 chr2 182263594 182263945 -68423909 - THE1C LTR MaLR 0 375 1 583 278 128 78 chr2 182263946 182264518 -68423336 - L2 LINE L2 -10 3303 2703 * 873 251 27 104 chr2 182264515 182264889 -68422965 + L2 LINE L2 2969 3313 0 352 280 106 40 chr2 182265901 182266222 -68421632 + MLT1L LTR MaLR 199 540 -75 1187 236 41 81 chr2 182266252 182266578 -68421276 + MLT1D LTR MaLR 1 301 -204 798 120 8 0 chr2 182266578 182266695 -68421159 + L1MC1 LINE L1 6216 6333 0 1187 236 41 81 chr2 182266695 182266876 -68420978 + MLT1D LTR MaLR 301 488 -17 356 213 12 0 chr2 182266892 182266972 -68420882 + MER94 DNA DNA 3 83 -51 180 111 0 0 chr2 182268850 182268877 -68418977 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1737 78 0 0 chr2 182269589 182269807 -68418047 + AluSg/x SINE Alu 79 296 -14 490 258 55 78 chr2 182270252 182270446 -68417408 + MIR SINE MIR 13 203 -58 279 218 36 55 chr2 182270584 182270694 -68417160 - MLT1K LTR MaLR -10 578 471 209 245 19 0 chr2 182271135 182271188 -68416666 + MIR SINE MIR 199 252 -10 371 214 0 0 chr2 182273520 182273590 -68414264 + MER115 DNA AcHobo 146 215 -478 1586 30 13 0 chr2 182274208 182274482 -68413372 - L1PA7 LINE L1 -704 5468 5192 5503 47 1 3 chr2 182274482 182275160 -68412694 + L1PA7 LINE L1 5478 6154 0 298 318 62 0 chr2 182275287 182275416 -68412438 + MIR SINE MIR 122 258 -4 334 277 73 66 chr2 182276752 182276889 -68410965 - MIR3 SINE MIR -70 138 1 1065 121 0 18 chr2 182279614 182279780 -68408074 + L1PA10 LINE L1 6006 6168 0 2145 160 26 5 chr2 182279857 182280239 -68407615 - MLT1B LTR MaLR 0 390 1 715 242 103 14 chr2 182280633 182280856 -68406998 + MIR SINE MIR 2 244 -18 265 310 110 14 chr2 182281573 182281718 -68406136 - MER5B DNA MER1_type -16 162 4 1824 197 25 25 chr2 182281755 182282151 -68405703 + MSTD LTR MaLR 1 396 0 22 56 0 0 chr2 182282478 182282514 -68405340 + AT_rich Low_complexity Low_complexity 1 36 0 301 210 16 0 chr2 182283155 182283217 -68404637 - MER5A DNA MER1_type 0 189 127 3561 233 44 54 chr2 182283217 182284689 -68403165 + L1M4 LINE L1 2525 3981 -2165 2102 92 25 41 chr2 182285523 182285840 -68402014 + AluSx SINE Alu 1 312 0 303 318 35 47 chr2 182285949 182286119 -68401735 + MER5A DNA MER1_type 14 181 -8 205 280 20 20 chr2 182287109 182287159 -68400695 - L2 LINE L2 -96 3176 3127 1945 156 0 0 chr2 182287762 182288057 -68399797 - AluSx SINE Alu -17 295 1 2601 127 31 2 chr2 182288235 182288651 -68399203 + MSTA LTR MaLR 1 428 0 401 282 115 0 chr2 182288709 182288865 -68398989 + MER96 DNA MER1_type 1 174 -1 21 0 0 0 chr2 182289180 182289201 -68398653 + AT_rich Low_complexity Low_complexity 1 21 0 285 125 0 0 chr2 182289206 182289254 -68398600 + Alu SINE Alu 246 293 -8 2352 255 81 108 chr2 182289260 182291621 -68396233 + HAL1 LINE L1 104 2399 -108 25 0 0 0 chr2 182291707 182291732 -68396122 + AT_rich Low_complexity Low_complexity 1 25 0 197 294 88 39 chr2 182293889 182293991 -68393863 + MIR SINE MIR 40 146 -62 22 0 0 0 chr2 182295053 182295075 -68392779 + AT_rich Low_complexity Low_complexity 1 22 0 948 179 0 0 chr2 182295913 182296075 -68391779 + AluJb SINE Alu 147 308 -4 1600 237 122 99 chr2 182296358 182297896 -68389958 + HAL1 LINE L1 816 2387 -120 2630 46 0 0 chr2 182298518 182298822 -68389032 - AluY SINE Alu -7 304 1 216 291 58 12 chr2 182298930 182299016 -68388838 - L2 LINE L2 -7 3265 3176 918 251 48 0 chr2 182299890 182300117 -68387737 - MIR SINE MIR -10 252 15 249 349 12 0 chr2 182303004 182303090 -68384764 + MIR SINE MIR 46 132 -130 312 291 168 5 chr2 182303131 182303334 -68384520 - L1ME4a LINE L1 -194 5927 5692 942 247 180 28 chr2 182303542 182304002 -68383852 - L2 LINE L2 -13 3300 2773 2233 106 0 3 chr2 182304082 182304375 -68383479 + AluSx SINE Alu 1 292 -20 33 0 0 0 chr2 182304375 182304408 -68383446 + AT_rich Low_complexity Low_complexity 1 33 0 346 214 14 0 chr2 182304996 182305066 -68382788 - L2 LINE L2 0 3272 3202 2008 164 0 0 chr2 182305463 182305773 -68382081 + AluSx SINE Alu 1 310 -2 310 287 2 47 chr2 182306302 182306465 -68381389 + MER5A DNA MER1_type 59 189 0 534 78 29 0 chr2 182306734 182306836 -68381018 + (TAGA)n Simple_repeat Simple_repeat 4 108 0 1899 142 0 0 chr2 182306836 182307110 -68380744 - AluJb SINE Alu -38 274 1 248 139 0 23 chr2 182309372 182309409 -68378445 + MER53 DNA DNA 1 37 -147 1233 137 31 31 chr2 182309409 182309665 -68378189 + L1MA7 LINE L1 6033 6288 -3 32 67 0 0 chr2 182309670 182309730 -68378124 + AT_rich Low_complexity Low_complexity 1 60 0 837 185 23 0 chr2 182309746 182309919 -68377935 - MER53 DNA DNA -12 177 1 23 0 0 0 chr2 182310476 182310499 -68377355 + AT_rich Low_complexity Low_complexity 1 23 0 1406 90 0 0 chr2 182310939 182311117 -68376737 + AluY SINE Alu 130 307 -4 355 297 179 7 chr2 182311216 182311361 -68376493 - MIR SINE MIR -72 190 21 388 321 0 6 chr2 182312020 182312179 -68375675 + L1MC5 LINE L1 4795 4952 -1194 27 29 0 0 chr2 182312322 182312356 -68375498 + AT_rich Low_complexity Low_complexity 1 34 0 333 195 0 0 chr2 182312511 182312588 -68375266 + L1MC5 LINE L1 5362 5438 -2370 4078 278 64 54 chr2 182312593 182315008 -68372846 + L1ME2 LINE L1 36 2438 -3777 2275 116 0 3 chr2 182315008 182315319 -68372535 - AluSg SINE Alu 0 310 1 4078 278 64 54 chr2 182315319 182316097 -68371757 + L1ME2 LINE L1 2438 3206 -3009 2984 226 74 34 chr2 182316117 182317941 -68369913 + L1ME2 LINE L1 4313 6224 -9 905 269 64 17 chr2 182317952 182318250 -68369604 + L1MC5 LINE L1 5423 5734 -2074 643 219 159 55 chr2 182318349 182318611 -68369243 + L1MC5 LINE L1 6649 7027 -1015 3189 86 53 53 chr2 182318873 182319423 -68368431 - L1MA3 LINE L1 -101 6204 5655 317 147 64 110 chr2 182319430 182319539 -68368315 + L1MC5 LINE L1 6938 7041 -920 220 132 75 0 chr2 182319622 182319675 -68368179 + GA-rich Low_complexity Low_complexity 1 57 0 829 101 14 0 chr2 182319790 182319929 -68367925 + (GAAA)n Simple_repeat Simple_repeat 1 141 0 2078 128 10 3 chr2 182319934 182320231 -68367623 + AluJo SINE Alu 12 310 -2 444 196 19 17 chr2 182320232 182320348 -68367506 + L1MC5 LINE L1 7820 7993 -2 192 318 182 14 chr2 182321019 182321167 -68366687 - L2 LINE L2 -875 2439 2267 297 0 0 0 chr2 182323307 182323340 -68364514 + (TA)n Simple_repeat Simple_repeat 1 33 0 3492 111 23 25 chr2 182324463 182324984 -68362870 - MER1A DNA MER1_type -4 523 4 276 318 207 0 chr2 182324986 182325266 -68362588 + L2 LINE L2 2293 2630 -684 441 274 25 76 chr2 182325402 182325599 -68362255 - MIR SINE MIR -50 212 26 229 271 131 57 chr2 182325989 182326111 -68361743 + L2 LINE L2 3138 3268 -4 939 169 129 28 chr2 182326798 182327046 -68360808 - L1MEc LINE L1 -5422 974 702 189 0 0 0 chr2 182327054 182327075 -68360779 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1282 132 0 21 chr2 182327075 182327265 -68360589 - AluSg/x SINE Alu -32 280 95 2120 259 39 20 chr2 182327266 182327907 -68359947 - L1MEc LINE L1 -5707 689 37 210 182 0 23 chr2 182328318 182328362 -68359492 + GA-rich Low_complexity Low_complexity 2 44 0 2369 231 94 37 chr2 182329645 182330691 -68357163 - L1ME2 LINE L1 -9 6155 5028 2421 97 3 0 chr2 182330691 182331002 -68356852 - AluSp SINE Alu -1 312 1 2369 231 94 37 chr2 182331002 182331155 -68356699 - L1ME2 LINE L1 -1136 5028 4885 1011 204 81 34 chr2 182331177 182331441 -68356413 - L1ME2 LINE L1 -2905 3241 2952 2326 144 50 24 chr2 182331441 182331864 -68355990 + Tigger2a DNA MER2_type 1 434 0 1011 204 81 34 chr2 182331864 182331982 -68355872 - L1ME2 LINE L1 -3194 2952 2841 224 267 53 40 chr2 182331995 182332070 -68355784 - L2 LINE L2 -5 3308 3233 198 184 224 0 chr2 182332098 182332147 -68355707 + L2 LINE L2 3212 3271 -1 180 0 0 0 chr2 182332973 182332993 -68354861 + (T)n Simple_repeat Simple_repeat 1 20 0 2379 84 0 16 chr2 182334039 182334347 -68353507 + AluY SINE Alu 1 303 -8 235 164 18 18 chr2 182335004 182335059 -68352795 + L1MEc LINE L1 84 138 -6258 540 214 0 0 chr2 182335060 182335149 -68352705 - MLT2B2 LTR ERVL -93 422 334 1637 183 32 16 chr2 182335275 182335586 -68352268 - MLT2B2 LTR ERVL -199 316 1 1002 269 88 12 chr2 182335586 182335917 -68351937 + L1MEc LINE L1 238 593 -5803 409 213 0 0 chr2 182335917 182335992 -68351862 + Tigger5 DNA MER2_type 1 75 -2248 2705 256 75 31 chr2 182336050 182337191 -68350663 + L1MEc LINE L1 591 1781 -4615 2167 236 63 17 chr2 182337195 182337399 -68350455 + L1MEc LINE L1 1845 2038 -4177 1375 110 68 18 chr2 182337399 182337618 -68350236 + MER30 DNA MER1_type 1 230 0 2167 236 63 17 chr2 182337618 182338464 -68349390 + L1MEc LINE L1 2038 2897 -3318 639 154 7 7 chr2 182338481 182338617 -68349237 + L1 LINE L1 5171 5306 -840 762 127 13 132 chr2 182338625 182338853 -68349001 + L1MEc LINE L1 2910 3110 -3105 908 213 69 61 chr2 182338860 182339221 -68348633 + L1MEc LINE L1 4129 4492 -1723 393 56 42 28 chr2 182339321 182339393 -68348461 - L1M1 LINE L1 -4345 3220 3148 * 1307 68 11 0 chr2 182339395 182339571 -68348283 - L1PB1 LINE L1 0 6151 5974 4590 108 18 49 chr2 182339571 182339648 -68348206 + L1PB1 LINE L1 5096 5174 -977 7370 104 6 19 chr2 182339648 182340734 -68347120 + MER11C LTR ERVK 1 1071 0 4590 108 18 49 chr2 182340734 182341548 -68346306 + L1PB1 LINE L1 5174 5957 -194 2426 78 0 0 chr2 182342096 182342404 -68345450 - AluY SINE Alu -3 308 1 300 278 94 26 chr2 182342413 182342604 -68345250 + L1M4 LINE L1 3533 3736 -2410 5744 125 41 39 chr2 182342614 182343756 -68344098 + L1MA5 LINE L1 5153 6300 0 25 65 0 0 chr2 182343762 182343808 -68344046 + AT_rich Low_complexity Low_complexity 1 46 0 472 303 82 29 chr2 182343931 182344452 -68343402 + L1M4 LINE L1 3974 4522 -1624 1937 122 0 0 chr2 182344512 182344782 -68343072 + AluSg SINE Alu 39 308 -2 386 331 24 11 chr2 182345033 182345282 -68342572 + L1ME3 LINE L1 4377 4625 -1521 2112 106 0 7 chr2 182345584 182345888 -68341966 - AluSg SINE Alu 0 302 1 1236 280 97 38 chr2 182346098 182346365 -68341489 + L1ME3 LINE L1 5083 5333 -829 360 43 0 0 chr2 182346365 182346411 -68341443 + (CA)n Simple_repeat Simple_repeat 1 46 0 1236 280 97 38 chr2 182346411 182347070 -68340784 + L1ME3 LINE L1 5333 6065 -97 436 288 87 37 chr2 182347376 182347832 -68340022 + L1MCc LINE L1 1 721 -5701 1425 169 19 22 chr2 182347883 182348196 -68339658 + L1M4 LINE L1 4906 5217 -929 781 225 99 30 chr2 182348207 182348458 -68339396 + L1MCc LINE L1 2736 2983 -3958 1686 140 26 63 chr2 182348458 182348808 -68339046 - MER1B DNA MER1_type 0 337 1 781 225 99 30 chr2 182348808 182348869 -68338985 + L1MCc LINE L1 2983 3038 -3903 708 136 8 30 chr2 182348885 182349017 -68338837 + FLAM_C SINE Alu 13 141 -2 5105 232 73 48 chr2 182349018 182349080 -68338774 + L1MCc LINE L1 3036 3095 -3846 1852 140 31 0 chr2 182349080 182349372 -68338482 + AluSx SINE Alu 1 301 -11 5105 232 73 48 chr2 182349372 182349786 -68338068 + L1MCc LINE L1 3095 3497 -3444 2118 128 0 0 chr2 182349786 182350091 -68337763 - AluSx SINE Alu -7 305 1 5105 232 73 48 chr2 182350091 182351571 -68336283 + L1MCc LINE L1 3497 5043 -1898 21 36 0 0 chr2 182351728 182351756 -68336098 + AT_rich Low_complexity Low_complexity 1 28 0 1991 132 43 12 chr2 182352042 182352368 -68335486 + MER1B DNA MER1_type 2 337 0 23 0 0 0 chr2 182352582 182352605 -68335249 + AT_rich Low_complexity Low_complexity 1 23 0 1730 195 0 0 chr2 182352969 182353266 -68334588 + AluJb SINE Alu 1 297 -15 189 0 0 0 chr2 182353623 182353644 -68334210 + (A)n Simple_repeat Simple_repeat 1 21 0 1515 147 28 53 chr2 182353668 182353988 -68333866 + AluJb SINE Alu 1 312 0 547 202 117 7 chr2 182353994 182354138 -68333716 + MIR SINE MIR 19 178 -63 294 273 0 0 chr2 182355992 182356058 -68331796 - MER2 DNA MER2_type 0 345 280 1486 194 0 0 chr2 182356083 182356331 -68331523 + AluJb SINE Alu 1 248 -64 507 143 41 41 chr2 182356331 182356429 -68331425 - MER2 DNA MER2_type -163 182 85 440 231 22 11 chr2 182356465 182356556 -68331298 - MER2 DNA MER2_type -248 97 6 223 328 0 10 chr2 182357367 182357433 -68330421 + MIR SINE MIR 34 97 -111 1491 274 78 65 chr2 182357444 182358108 -68329746 + L2 LINE L2 2182 2854 -460 824 308 125 23 chr2 182358252 182358983 -68328871 + L2 LINE L2 2505 3313 0 324 303 91 45 chr2 182359011 182359143 -68328711 + L2 LINE L2 3116 3253 -19 1659 167 40 57 chr2 182359895 182360249 -68327605 - MER7A DNA MER2_type 0 346 1 461 222 11 21 chr2 182360378 182360504 -68327350 + L1ME1 LINE L1 6052 6334 0 186 309 0 0 chr2 182361452 182361494 -68326360 - MIR SINE MIR -135 73 32 25 51 0 0 chr2 182362449 182362488 -68325366 + AT_rich Low_complexity Low_complexity 1 39 0 24 77 0 0 chr2 182363387 182363439 -68324415 + AT_rich Low_complexity Low_complexity 1 52 0 336 102 0 0 chr2 182363955 182364004 -68323850 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 21 0 0 0 chr2 182365718 182365739 -68322115 + AT_rich Low_complexity Low_complexity 1 21 0 543 264 82 78 chr2 182365839 182366290 -68321564 + L1ME LINE L1 5347 5799 -322 322 285 16 65 chr2 182366312 182366498 -68321356 + L1ME3A LINE L1 5762 5938 -232 476 258 82 44 chr2 182368711 182368870 -68318984 - MIR3 SINE MIR -7 201 37 30 27 0 0 chr2 182369812 182369849 -68318005 + AT_rich Low_complexity Low_complexity 1 37 0 449 249 42 36 chr2 182371029 182371222 -68316632 + L1ME4a LINE L1 5710 5903 -218 1025 261 183 18 chr2 182372024 182372461 -68315393 + MLT1J LTR MaLR 3 511 0 247 164 200 18 chr2 182372631 182372686 -68315168 - MER5A DNA MER1_type -2 187 123 1781 177 3 16 chr2 182372889 182373205 -68314649 + AluJb SINE Alu 1 312 0 200 378 54 9 chr2 182373333 182373444 -68314410 - L2 LINE L2 -1892 1422 1307 21 71 0 0 chr2 182373480 182373522 -68314332 + AT_rich Low_complexity Low_complexity 1 42 0 582 148 0 0 chr2 182373627 182373715 -68314139 - AluSg/x SINE Alu -17 293 206 813 192 41 68 chr2 182373916 182374026 -68313828 + AluJo SINE Alu 29 132 -180 2167 108 0 0 chr2 182374026 182374321 -68313533 + AluSg SINE Alu 13 307 -3 813 192 41 68 chr2 182374321 182374429 -68313425 + AluJo SINE Alu 132 241 -71 1061 133 55 22 chr2 182374878 182375059 -68312795 - MER3 DNA MER1_type 0 209 23 931 271 181 46 chr2 182375665 182376516 -68311338 + HAL1 LINE L1 6 971 -1536 228 191 362 0 chr2 182376523 182376628 -68311226 - MIR SINE MIR -10 252 110 183 239 0 0 chr2 182376643 182376689 -68311165 + GA-rich Low_complexity Low_complexity 4 49 0 21 57 0 0 chr2 182376820 182376855 -68310999 + AT_rich Low_complexity Low_complexity 1 35 0 595 307 49 35 chr2 182376896 182377183 -68310671 + L1MC4a LINE L1 5535 5825 -1983 1747 154 10 10 chr2 182377185 182377506 -68310348 + AluJb SINE Alu 1 321 0 1759 295 101 11 chr2 182377779 182378641 -68309213 - L2 LINE L2 -8 3305 2365 1943 141 3 14 chr2 182379440 182379737 -68308117 - AluSx SINE Alu -18 294 1 2132 130 3 3 chr2 182380196 182380503 -68307351 + AluSx SINE Alu 1 307 -5 253 282 39 0 chr2 182380641 182380719 -68307135 + MIR SINE MIR 182 262 0 23 54 0 0 chr2 182380857 182380894 -68306960 + AT_rich Low_complexity Low_complexity 1 37 0 2278 103 6 3 chr2 182380996 182381307 -68306547 - AluSq SINE Alu -1 312 1 257 280 187 19 chr2 182381492 182381599 -68306255 + L2 LINE L2 3184 3308 -5 33047 98 14 11 chr2 182381856 182386720 -68301134 + L1PA6 LINE L1 12 4893 -1253 6499 60 6 2 chr2 182387004 182387839 -68300015 + L1PA6 LINE L1 5307 6144 -10 201 299 45 30 chr2 182388184 182388251 -68299603 + L2 LINE L2 3134 3201 -71 22 35 0 0 chr2 182388470 182388499 -68299355 + AT_rich Low_complexity Low_complexity 1 29 0 33 43 0 0 chr2 182390527 182390574 -68297280 + AT_rich Low_complexity Low_complexity 1 47 0 2163 125 0 3 chr2 182391025 182391330 -68296524 + AluSx SINE Alu 1 304 -8 226 167 0 0 chr2 182391702 182391738 -68296116 + tRNA-Arg-AGA tRNA tRNA 3 38 -38 249 276 48 38 chr2 182391855 182391960 -68295894 - MIR SINE MIR -41 221 116 832 194 16 47 chr2 182392092 182392283 -68295571 + MIR SINE MIR 2 186 -76 430 250 28 0 chr2 182392302 182392410 -68295444 + MIR SINE MIR 152 262 0 459 293 14 14 chr2 182392459 182392606 -68295248 + MIR SINE MIR 110 256 -6 490 189 6 161 chr2 182392852 182393032 -68294822 - MIR SINE MIR 0 262 111 1260 203 66 3 chr2 182393190 182393491 -68294363 + MER33 DNA MER1_type 1 320 -4 192 40 0 0 chr2 182393604 182393629 -68294225 + (TC)n Simple_repeat Simple_repeat 2 26 0 763 215 8 84 chr2 182394456 182394693 -68293161 - MER20 DNA MER1_type 0 219 1 182 368 0 0 chr2 182395079 182395136 -68292718 - L2 LINE L2 -3 3269 3213 27 29 0 0 chr2 182395632 182395666 -68292188 + AT_rich Low_complexity Low_complexity 1 34 0 25 31 0 0 chr2 182396037 182396069 -68291785 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr2 182397300 182397322 -68290532 + AT_rich Low_complexity Low_complexity 1 22 0 226 43 0 149 chr2 182398991 182399038 -68288816 - HSMAR1 DNA Mariner -1245 42 3 2124 101 24 3 chr2 182399187 182399484 -68288370 + AluSg1 SINE Alu 1 303 -6 2405 132 44 7 chr2 182399963 182400372 -68287482 - MSTB LTR MaLR -2 424 1 432 295 137 71 chr2 182401713 182402004 -68285850 + L2 LINE L2 2721 2992 -280 740 203 95 0 chr2 182402004 182402162 -68285692 + MER45A DNA AcHobo 5 177 -1 432 295 137 71 chr2 182402162 182402387 -68285467 + L2 LINE L2 2992 3267 -5 293 206 137 48 chr2 182402583 182402729 -68285125 + Charlie7 DNA MER1_type 2432 2590 -22 1398 150 4 17 chr2 182406329 182406563 -68281291 - MER46A DNA MER2_type 0 236 6 360 314 51 0 chr2 182406644 182406762 -68281092 - L2 LINE L2 -2 3311 3188 2441 77 3 0 chr2 182407069 182407367 -68280487 + AluSq SINE Alu 1 299 -14 3924 155 52 80 chr2 182407650 182408593 -68279261 + L1MB7 LINE L1 5256 6172 -12 852 170 80 37 chr2 182408624 182408812 -68279042 - MIR SINE MIR -42 220 25 347 298 133 32 chr2 182408909 182409067 -68278787 - MER5A DNA MER1_type 0 189 16 780 188 0 0 chr2 182409674 182409807 -68278047 + FLAM_A SINE Alu 1 133 0 507 332 26 22 chr2 182410744 182410916 -68276938 + MIR SINE MIR 20 195 -67 2232 115 0 3 chr2 182410916 182411221 -68276633 + AluSg SINE Alu 1 304 -6 507 332 26 22 chr2 182411221 182411277 -68276577 + MIR SINE MIR 195 249 -13 200 370 0 19 chr2 182411345 182411453 -68276401 - L2 LINE L2 -201 3071 2966 374 255 94 19 chr2 182411601 182411707 -68276147 + L2 LINE L2 3184 3297 -16 252 0 0 0 chr2 182411764 182411792 -68276062 + (A)n Simple_repeat Simple_repeat 1 28 0 1957 241 60 22 chr2 182412292 182412686 -68275168 + MLT1G LTR MaLR 68 486 -104 3975 145 30 11 chr2 182412686 182413390 -68274464 + LTR62 LTR ERVK 1 717 -2 1957 241 60 22 chr2 182413390 182413493 -68274361 + MLT1G LTR MaLR 486 584 -6 36 0 0 0 chr2 182414049 182414085 -68273769 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 182414382 182414404 -68273450 + AT_rich Low_complexity Low_complexity 1 22 0 2422 97 0 0 chr2 182415567 182415876 -68271978 + AluSx SINE Alu 1 309 -3 2286 95 3 0 chr2 182416216 182416512 -68271342 + AluSp SINE Alu 1 297 -16 24 0 0 0 chr2 182416896 182416920 -68270934 + AT_rich Low_complexity Low_complexity 1 24 0 340 277 356 0 chr2 182417263 182417451 -68270403 - MIR SINE MIR 0 262 8 482 246 49 35 chr2 182417823 182417965 -68269889 - MIR SINE MIR -93 169 26 227 288 30 0 chr2 182418090 182418156 -68269698 + MLT1K LTR MaLR 128 195 -393 27 29 0 0 chr2 182418314 182418348 -68269506 + AT_rich Low_complexity Low_complexity 1 34 0 2078 141 0 0 chr2 182418379 182418676 -68269178 + AluSq SINE Alu 1 297 -16 451 279 50 7 chr2 182418875 182419015 -68268839 + MLT2F LTR ERVL 1 146 -517 649 203 28 68 chr2 182419020 182419197 -68268657 + MLT1E3 LTR MaLR 52 221 -403 276 258 88 113 chr2 182419042 182419325 -68268529 + MLT2C1 LTR ERVL 57 332 -65 * 248 133 44 0 chr2 182419380 182419425 -68268429 + MLT2F LTR ERVL 615 661 -2 304 278 86 53 chr2 182419425 182419612 -68268242 + L1ME4a LINE L1 5736 5928 -193 433 376 0 6 chr2 182420033 182420198 -68267656 - L2 LINE L2 -613 2701 2538 1396 249 79 5 chr2 182420632 182421001 -68266853 + MSTD LTR MaLR 1 396 0 3284 138 28 43 chr2 182421369 182422038 -68265816 - L1MA7 LINE L1 -12 6279 5621 552 279 114 27 chr2 182422052 182422489 -68265365 - L1MC/D LINE L1 -774 5396 5270 346 288 50 45 chr2 182422491 182422689 -68265165 - L1MC/D LINE L1 -981 5165 4967 296 237 258 0 chr2 182423068 182423161 -68264693 - L2 LINE L2 -14 3299 3183 1209 98 0 0 chr2 182423585 182423748 -68264106 + AluSq SINE Alu 139 301 -12 304 279 109 111 chr2 182424106 182424640 -68263214 + L1M2 LINE L1 519 1149 -5700 252 213 0 0 chr2 182424731 182424792 -68263062 + (CATA)n Simple_repeat Simple_repeat 3 63 0 233 211 0 0 chr2 182424792 182424849 -68263005 - L1MC4 LINE L1 -1338 6704 6648 312 273 55 18 chr2 182424851 182424961 -68262893 - MIR SINE MIR -59 203 90 2047 107 0 0 chr2 182425511 182425774 -68262080 - AluSg SINE Alu -47 263 1 1672 184 33 33 chr2 182426587 182426952 -68260902 - MLT1A1 LTR MaLR 0 365 1 22 56 0 0 chr2 182427384 182427420 -68260434 + AT_rich Low_complexity Low_complexity 1 36 0 1923 129 181 8 chr2 182427847 182428211 -68259643 - MSTA LTR MaLR 0 428 2 473 284 78 66 chr2 182428745 182429171 -68258683 - MLT1K LTR MaLR 0 588 158 1154 123 250 9 chr2 182429219 182429474 -68258380 + AluJb SINE Alu 1 310 0 297 0 0 0 chr2 182429474 182429507 -68258347 + (TA)n Simple_repeat Simple_repeat 1 33 0 306 314 0 25 chr2 182430109 182430227 -68257627 - L1MC4 LINE L1 -1314 6728 6614 2073 115 7 3 chr2 182430311 182430598 -68257256 + AluSx SINE Alu 1 288 -24 23 0 0 0 chr2 182430598 182430621 -68257233 + AT_rich Low_complexity Low_complexity 1 23 0 2532 59 0 0 chr2 182431465 182431771 -68256083 + AluY SINE Alu 1 306 -5 281 364 68 25 chr2 182432214 182432376 -68255478 - L2 LINE L2 0 3272 3104 25 31 0 0 chr2 182433457 182433489 -68254365 + AT_rich Low_complexity Low_complexity 1 32 0 264 135 0 0 chr2 182433690 182433727 -68254127 - tRNA-Met-i tRNA tRNA -38 37 1 5373 182 40 75 chr2 182433899 182435106 -68252748 - L1MC4 LINE L1 -1 8041 6794 2200 127 0 6 chr2 182435106 182435420 -68252434 + AluSx SINE Alu 1 312 0 5373 182 40 75 chr2 182435420 182436098 -68251756 - L1MC4 LINE L1 -1248 6794 6103 1757 159 0 44 chr2 182436098 182436242 -68251612 + AluJo SINE Alu 3 152 -160 2179 114 3 0 chr2 182436242 182436540 -68251314 + AluSx SINE Alu 1 299 -13 1757 159 0 44 chr2 182436540 182436715 -68251139 + AluJo SINE Alu 152 308 -4 5373 182 40 75 chr2 182436715 182436873 -68250981 - L1MC4 LINE L1 -1939 6103 5941 628 309 29 14 chr2 182436929 182437347 -68250507 - L1M4 LINE L1 -1442 4704 4281 2685 24 0 0 chr2 182437421 182437718 -68250136 + AluY SINE Alu 1 297 -14 253 361 107 21 chr2 182437979 182438270 -68249584 - L2 LINE L2 -965 2349 2034 629 217 25 13 chr2 182438424 182438581 -68249273 + MER103 DNA DNA 1 159 -7 2424 81 0 0 chr2 182440310 182440606 -68247248 + AluSq SINE Alu 1 296 -17 1306 284 120 42 chr2 182440644 182441246 -68246608 - L1MEd LINE L1 -5330 789 141 198 0 0 0 chr2 182441293 182441315 -68246539 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 2161 109 0 0 chr2 182441317 182441600 -68246254 - AluSx SINE Alu -29 283 1 280 303 68 38 chr2 182441926 182442058 -68245796 + L2 LINE L2 2570 2705 -609 314 346 10 0 chr2 182442660 182442764 -68245090 - L2 LINE L2 -5 3308 3204 7719 124 36 11 chr2 182443258 182443841 -68244013 + L1PBa LINE L1 1392 1958 -4905 2072 98 37 17 chr2 182443841 182444138 -68243716 + AluSx SINE Alu 1 303 -9 7719 124 36 11 chr2 182444138 182444871 -68242983 + L1PBa LINE L1 1958 2742 -4121 181 310 10 60 chr2 182444938 182445038 -68242816 - L2 LINE L2 -1038 2276 2182 377 328 41 16 chr2 182446001 182446123 -68241731 - MIR3 SINE MIR -50 158 34 408 285 86 54 chr2 182447792 182447978 -68239876 + MIR SINE MIR 21 212 -50 1643 117 55 4 chr2 182448070 182448344 -68239510 - L1MB3 LINE L1 -1 6182 5895 239 329 105 64 chr2 182448527 182448822 -68239032 + L2 LINE L2 227 533 -2781 3335 255 114 20 chr2 182448845 182449965 -68237889 - L2 LINE L2 -793 2521 1296 634 226 226 8 chr2 182450012 182450247 -68237607 + MER5C DNA MER1_type 39 324 0 657 296 77 4 chr2 182450255 182450488 -68237366 - L2 LINE L2 -2025 1289 1040 1291 106 90 201 chr2 182450488 182450867 -68236987 - MER1B DNA MER1_type 0 337 1 257 206 15 0 chr2 182450886 182450954 -68236900 + L1ME2 LINE L1 6086 6154 -10 1743 161 10 27 chr2 182452136 182452435 -68235419 + AluSx SINE Alu 4 297 -15 298 329 12 0 chr2 182452656 182452741 -68235113 - MIR3 SINE MIR -36 172 87 1890 138 10 10 chr2 182452749 182453040 -68234814 + AluJo SINE Alu 3 293 -19 216 0 0 0 chr2 182453219 182453243 -68234611 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 307 296 82 20 chr2 182454777 182454973 -68232881 + MLT1H LTR MaLR 229 436 -113 185 255 21 0 chr2 182455028 182455075 -68232779 - L2 LINE L2 -654 2660 2613 2178 126 0 7 chr2 182455137 182455438 -68232416 + AluSx SINE Alu 1 299 -13 1511 200 136 46 chr2 182455454 182456089 -68231765 + L1MC5 LINE L1 7246 7926 -35 3233 159 41 15 chr2 182456305 182456960 -68230894 + L1MA7 LINE L1 5620 6291 0 27 0 0 0 chr2 182456960 182456987 -68230867 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 182457141 182457164 -68230690 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 182457389 182457428 -68230426 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 182457782 182457804 -68230050 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 182457817 182457846 -68230008 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr2 182458019 182458051 -68229803 + AT_rich Low_complexity Low_complexity 1 32 0 1255 224 82 0 chr2 182458220 182458524 -68229330 + MER45B DNA AcHobo 1 329 -711 2016 163 55 14 chr2 182458542 182458960 -68228894 + MER45B DNA AcHobo 606 1040 0 298 267 114 19 chr2 182459419 182459524 -68228330 - L2 LINE L2 -9 3263 3149 243 375 140 0 chr2 182461420 182461556 -68226298 + L2 LINE L2 3117 3271 -1 2039 128 7 3 chr2 182461695 182461999 -68225855 + AluSx SINE Alu 1 305 -7 1858 164 33 86 chr2 182462320 182462776 -68225078 + MSTB1 LTR MaLR 1 432 0 1625 161 98 0 chr2 182463083 182463357 -68224497 - AluJo SINE Alu -11 301 1 521 224 14 35 chr2 182463514 182463657 -68224197 - LTR33 LTR ERVL 0 521 382 434 242 60 0 chr2 182463804 182463953 -68223901 - LTR33 LTR ERVL -363 158 1 263 322 26 35 chr2 182464057 182464172 -68223682 + MIR3 SINE MIR 14 127 -81 222 91 0 0 chr2 182464314 182464347 -68223507 + (TC)n Simple_repeat Simple_repeat 2 34 0 598 318 46 8 chr2 182464696 182464935 -68222919 - MIR SINE MIR -3 259 12 631 144 0 0 chr2 182465049 182465153 -68222701 + L1MB3 LINE L1 6070 6173 -10 463 291 97 30 chr2 182465608 182465938 -68221916 + L1ME4a LINE L1 5689 6040 -81 1031 229 115 64 chr2 182465978 182466446 -68221408 - MLT1F1 LTR MaLR 0 567 76 1442 204 48 0 chr2 182466537 182466806 -68221048 + AluJb SINE Alu 1 282 -30 333 82 0 0 chr2 182466810 182466859 -68220995 + (CA)n Simple_repeat Simple_repeat 2 50 0 7070 55 5 1 chr2 182467411 182468827 -68219027 + L1PA6 LINE L1 4732 6151 -3 180 97 0 0 chr2 182468834 182468865 -68218989 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2182 104 0 25 chr2 182468878 182469194 -68218660 + AluSg SINE Alu 3 310 0 1325 87 17 0 chr2 182469203 182469375 -68218479 + AluSg/x SINE Alu 123 297 -15 1264 195 26 17 chr2 182469380 182469686 -68218168 + MLT1D LTR MaLR 215 502 -3 270 313 31 39 chr2 182471042 182471170 -68216684 - MIR SINE MIR -108 154 28 274 279 101 0 chr2 182471422 182471501 -68216353 + L2 LINE L2 3200 3286 -27 1092 134 0 0 chr2 182471842 182471999 -68215855 - AluSg/x SINE Alu -1 311 155 1864 125 7 14 chr2 182472099 182472380 -68215474 + AluSx SINE Alu 23 301 -11 343 260 69 110 chr2 182475599 182475772 -68212082 + MIR SINE MIR 67 232 -30 379 245 44 69 chr2 182476054 182476258 -68211596 - L1ME LINE L1 -334 5787 5589 2273 100 0 0 chr2 182476397 182476687 -68211167 + AluSg SINE Alu 1 290 -20 1278 166 98 11 chr2 182476745 182477010 -68210844 + AluJo SINE Alu 1 288 -24 2033 138 3 7 chr2 182477294 182477599 -68210255 + AluSx SINE Alu 1 304 -8 1573 180 15 77 chr2 182478102 182478252 -68209602 + MLT1A1 LTR MaLR 1 159 -206 2336 29 7 4 chr2 182478252 182478572 -68209282 - AluY SINE Alu 0 321 1 1573 180 15 77 chr2 182478572 182478809 -68209045 + MLT1A1 LTR MaLR 159 365 0 2358 92 7 0 chr2 182478856 182479161 -68208693 + AluSg SINE Alu 1 307 -3 21 36 0 0 chr2 182479262 182479290 -68208564 + AT_rich Low_complexity Low_complexity 1 28 0 834 153 0 0 chr2 182479324 182479442 -68208412 + AluJo/FLAM SINE Alu 1 118 -194 510 177 0 0 chr2 182479445 182479524 -68208330 + AluSp/q SINE Alu 172 250 -63 1171 196 0 13 chr2 182479524 182479748 -68208106 + AluJo SINE Alu 85 305 -7 1687 179 10 16 chr2 182481055 182481363 -68206491 - AluJo SINE Alu -6 306 1 1900 226 96 14 chr2 182481832 182482333 -68205521 + MLT1F LTR MaLR 1 542 0 2192 99 3 0 chr2 182482569 182482875 -68204979 - AluSq SINE Alu 0 307 1 182 270 63 0 chr2 182482978 182483041 -68204813 + MIR SINE MIR 78 144 -64 1701 171 27 17 chr2 182484379 182484671 -68203183 + AluJb SINE Alu 1 295 -17 22 0 0 0 chr2 182485414 182485436 -68202418 + AT_rich Low_complexity Low_complexity 1 22 0 585 197 96 46 chr2 182486024 182486263 -68201591 - HAL1b LINE L1 -95 1253 1003 206 137 20 39 chr2 182486353 182486379 -68201475 + (TAAA)n Simple_repeat Simple_repeat 2 28 -23 1029 156 0 45 chr2 182486379 182486558 -68201296 + FAM SINE Alu 1 171 -4 206 137 20 39 chr2 182486558 182486582 -68201272 + (TAAA)n Simple_repeat Simple_repeat 28 51 0 2456 87 0 0 chr2 182487293 182487593 -68200261 - AluSp SINE Alu -13 300 1 2382 77 3 0 chr2 182487931 182488241 -68199613 - AluY SINE Alu 0 311 1 358 319 187 6 chr2 182489010 182489192 -68198662 - MIR SINE MIR -36 226 12 2329 113 0 0 chr2 182489375 182489685 -68198169 + AluSx SINE Alu 1 310 -2 225 358 83 31 chr2 182490157 182490411 -68197443 - L2 LINE L2 -185 3087 2821 2560 54 0 10 chr2 182491006 182491320 -68196534 - AluY SINE Alu 0 311 1 830 215 96 83 chr2 182491514 182491811 -68196043 + MLT1J LTR MaLR 20 404 -107 2147 100 13 17 chr2 182491811 182492111 -68195743 - AluSx SINE Alu -13 299 1 830 215 96 83 chr2 182492111 182492219 -68195635 + MLT1J LTR MaLR 404 509 -2 2524 54 0 0 chr2 182492264 182492562 -68195292 - AluY SINE Alu -13 298 1 23 0 0 0 chr2 182492886 182492909 -68194945 + AT_rich Low_complexity Low_complexity 1 23 0 241 343 146 15 chr2 182494349 182494486 -68193368 + L2 LINE L2 3117 3271 -1 2039 128 7 3 chr2 182494625 182494929 -68192925 + AluSx SINE Alu 1 305 -7 1646 161 49 85 chr2 182495250 182495698 -68192156 + MSTB1 LTR MaLR 1 432 0 2071 117 0 33 chr2 182496907 182497214 -68190640 - AluSx SINE Alu -15 297 1 580 191 76 76 chr2 182497522 182497679 -68190175 + MLT1E2 LTR MaLR 28 184 -442 1099 104 0 0 chr2 182497683 182497818 -68190036 + AluSq/x SINE Alu 1 135 -177 697 68 0 0 chr2 182497970 182498058 -68189796 + L1P2 LINE L1 11 98 -6048 * 31116 74 6 31 chr2 182498056 182502868 -68184986 + L1P2 LINE L1 847 5532 -622 2418 78 7 10 chr2 182503583 182503890 -68183964 + AluSg SINE Alu 1 306 -4 726 168 39 39 chr2 182503908 182504087 -68183767 + MLT1C LTR MaLR 109 287 -180 1743 91 17 4 chr2 182504245 182504477 -68183377 + AluY SINE Alu 67 301 -10 806 206 0 0 chr2 182504485 182504616 -68183238 + FLAM_A SINE Alu 2 132 -1 510 224 109 0 chr2 182505041 182505188 -68182666 + MER69A DNA AcHobo 1 163 -14 232 211 37 83 chr2 182506504 182506613 -68181241 - L3 LINE CR1 -1 1576 1473 2251 103 0 13 chr2 182508129 182508429 -68179425 + AluSx SINE Alu 1 296 -16 219 256 0 37 chr2 182510409 182510491 -68177363 + G-rich Low_complexity Low_complexity 3 81 0 182 61 0 30 chr2 182512586 182512619 -68175235 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2196 40 0 0 chr2 182512619 182512868 -68174986 - AluY SINE Alu -62 249 1 189 0 0 0 chr2 182513541 182513562 -68174292 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2041 136 0 3 chr2 182513655 182513949 -68173905 + AluSg SINE Alu 1 293 -17 1933 128 0 0 chr2 182514664 182514944 -68172910 - AluSx SINE Alu 0 306 27 189 240 60 0 chr2 182515323 182515373 -68172481 + L2 LINE L2 3213 3265 -7 188 257 40 40 chr2 182515470 182515544 -68172310 - MER5B DNA MER1_type -28 150 77 878 176 0 0 chr2 182515561 182515697 -68172157 - AluJo SINE Alu -176 136 1 182 246 18 35 chr2 182515715 182515772 -68172082 - MER5A DNA MER1_type -124 65 10 265 310 133 25 chr2 182516339 182516497 -68171357 - MIR3 SINE MIR -14 194 20 1202 84 30 0 chr2 182516936 182517102 -68170752 - L1PA13 LINE L1 0 6163 5993 2220 130 3 0 chr2 182517107 182517415 -68170439 - AluSx SINE Alu -3 309 1 951 274 138 23 chr2 182517628 182517734 -68170120 - L1MC4a LINE L1 -1879 5929 5837 1726 179 7 20 chr2 182517734 182518036 -68169818 - AluJb SINE Alu -14 298 1 951 274 138 23 chr2 182518036 182518371 -68169483 - L1MC4a LINE L1 -1971 5837 5437 21 0 0 0 chr2 182518613 182518634 -68169220 + AT_rich Low_complexity Low_complexity 1 21 0 459 356 44 0 chr2 182518919 182519099 -68168755 - MIR SINE MIR -16 246 59 369 308 210 22 chr2 182519115 182519482 -68168372 + L2 LINE L2 2351 2786 -528 349 288 143 62 chr2 182519529 182519887 -68167967 + L2 LINE L2 2877 3263 -9 999 104 8 0 chr2 182522349 182522483 -68165371 - AluSp/q SINE Alu -5 308 174 21 0 0 0 chr2 182526232 182526253 -68161601 + AT_rich Low_complexity Low_complexity 1 21 0 247 146 36 0 chr2 182528497 182528552 -68159302 + (CAAA)n Simple_repeat Simple_repeat 4 60 0 717 258 66 24 chr2 182529164 182529377 -68158477 + MIR SINE MIR 3 224 -38 539 256 208 36 chr2 182529458 182529732 -68158122 + L3 LINE CR1 1240 1560 -17 205 250 0 0 chr2 182529944 182529992 -68157862 + G-rich Low_complexity Low_complexity 4 51 0 192 77 0 0 chr2 182530553 182530579 -68157275 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 660 160 10 0 chr2 182530582 182530682 -68157172 - AluJb SINE Alu -33 279 179 2121 105 4 4 chr2 182530864 182531162 -68156692 - AluSq SINE Alu 0 303 6 936 129 0 0 chr2 182531176 182531308 -68156546 - FLAM_C SINE Alu 0 133 2 532 269 67 0 chr2 182531510 182531644 -68156210 + L2 LINE L2 3171 3313 0 261 0 0 0 chr2 182531736 182531765 -68156089 + (A)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr2 182534016 182534039 -68153815 + GC_rich Low_complexity Low_complexity 1 23 0 30 0 0 0 chr2 182536566 182536596 -68151258 + AT_rich Low_complexity Low_complexity 1 30 0 208 217 0 22 chr2 182538607 182538653 -68149201 + (CCCG)n Simple_repeat Simple_repeat 2 46 0 208 150 25 0 chr2 182540603 182540643 -68147211 + (GGGTG)n Simple_repeat Simple_repeat 4 44 0 225 65 0 0 chr2 182540846 182540877 -68146977 + (CA)n Simple_repeat Simple_repeat 2 32 0 238 261 0 0 chr2 182541709 182541724 -68146130 + (CA)n Simple_repeat Simple_repeat 1 15 -54 219 69 0 0 chr2 182541724 182541753 -68146101 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 238 261 0 0 chr2 182541753 182541806 -68146048 + (CA)n Simple_repeat Simple_repeat 14 69 0 37 62 0 0 chr2 182542001 182542066 -68145788 + GC_rich Low_complexity Low_complexity 1 65 0 23 33 0 0 chr2 182542282 182542312 -68145542 + GC_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 182544861 182544882 -68142972 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 182546923 182546958 -68140896 + GC_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr2 182547482 182547524 -68140330 + GC_rich Low_complexity Low_complexity 1 42 0 303 122 0 0 chr2 182548802 182548851 -68139003 + (TC)n Simple_repeat Simple_repeat 2 50 0 249 33 0 0 chr2 182549352 182549382 -68138472 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 200 94 31 0 chr2 182551040 182551072 -68136782 + (CACCC)n Simple_repeat Simple_repeat 3 35 0 2180 86 0 7 chr2 182554782 182555073 -68132781 + AluSg SINE Alu 22 310 0 209 261 31 0 chr2 182555439 182555504 -68132350 + CT-rich Low_complexity Low_complexity 3 69 0 208 125 42 62 chr2 182557435 182557483 -68130371 + MIR SINE MIR 187 233 -29 353 276 104 15 chr2 182557500 182557634 -68130220 - MIR SINE MIR -77 185 40 479 268 0 49 chr2 182557841 182557983 -68129871 - MER5A DNA MER1_type 0 189 55 243 302 103 17 chr2 182557899 182558015 -68129839 + MER5A DNA MER1_type 63 188 -1 * 237 65 0 0 chr2 182559068 182559099 -68128755 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 22 80 0 0 chr2 182562730 182562780 -68125074 + GC_rich Low_complexity Low_complexity 1 50 0 238 163 22 43 chr2 182563108 182563200 -68124654 + CT-rich Low_complexity Low_complexity 4 93 0 420 20 0 0 chr2 182563252 182563301 -68124553 + (TG)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr2 182567418 182567440 -68120414 + AT_rich Low_complexity Low_complexity 1 22 0 216 196 0 0 chr2 182568717 182568763 -68119091 + GA-rich Low_complexity Low_complexity 1 46 0 228 35 0 0 chr2 182569015 182569044 -68118810 + (CCG)n Simple_repeat Simple_repeat 2 30 0 31 0 0 0 chr2 182569095 182569126 -68118728 + GC_rich Low_complexity Low_complexity 1 31 0 24 56 0 42 chr2 182569346 182569417 -68118437 + GC_rich Low_complexity Low_complexity 1 68 0 213 169 31 46 chr2 182569590 182569655 -68118199 + C-rich Low_complexity Low_complexity 1 64 0 324 0 0 0 chr2 182571652 182571688 -68116166 + (TG)n Simple_repeat Simple_repeat 2 37 0 208 279 0 16 chr2 182575536 182575597 -68112257 + G-rich Low_complexity Low_complexity 3 62 0 222 136 0 0 chr2 182576119 182576163 -68111691 + (GGA)n Simple_repeat Simple_repeat 1 44 0 231 114 0 0 chr2 182576894 182576929 -68110925 + (CCCGG)n Simple_repeat Simple_repeat 2 36 0 21 57 0 0 chr2 182577437 182577472 -68110382 + GC_rich Low_complexity Low_complexity 1 35 0 198 0 0 0 chr2 182579866 182579888 -68107966 + (TGGA)n Simple_repeat Simple_repeat 1 22 0 270 0 0 0 chr2 182579986 182580016 -68107838 + (TA)n Simple_repeat Simple_repeat 1 30 0 410 60 0 30 chr2 182580539 182580606 -68107248 + (TTTTTG)n Simple_repeat Simple_repeat 2 66 0 303 93 0 0 chr2 182584277 182584320 -68103534 + (CCA)n Simple_repeat Simple_repeat 1 43 0 207 0 0 0 chr2 182587602 182587625 -68100229 + (T)n Simple_repeat Simple_repeat 1 23 0 351 0 0 0 chr2 182590753 182590792 -68097062 + (CA)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr2 182591027 182591047 -68096807 + (TCCC)n Simple_repeat Simple_repeat 2 21 0 28 29 0 0 chr2 182591253 182591288 -68096566 + GC_rich Low_complexity Low_complexity 1 35 0 25 75 0 0 chr2 182591491 182591544 -68096310 + GC_rich Low_complexity Low_complexity 1 53 0 29 28 0 0 chr2 182591613 182591649 -68096205 + GC_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 182591684 182591707 -68096147 + GC_rich Low_complexity Low_complexity 1 23 0 425 193 7 0 chr2 182591725 182591870 -68095984 + (CCG)n Simple_repeat Simple_repeat 3 148 0 21 57 0 0 chr2 182592475 182592510 -68095344 + GC_rich Low_complexity Low_complexity 1 35 0 285 320 0 0 chr2 182592532 182592607 -68095247 + G-rich Low_complexity Low_complexity 3 77 0 194 247 11 35 chr2 182592953 182593127 -68094727 + CT-rich Low_complexity Low_complexity 5 174 0 214 241 12 12 chr2 182594005 182594088 -68093766 + CT-rich Low_complexity Low_complexity 1 83 0 207 0 0 0 chr2 182595681 182595704 -68092150 + (T)n Simple_repeat Simple_repeat 1 23 0 294 29 0 0 chr2 182605034 182605069 -68082785 + (TG)n Simple_repeat Simple_repeat 2 36 0 330 67 0 0 chr2 182606349 182606394 -68081460 + (CCG)n Simple_repeat Simple_repeat 2 46 0 21 36 0 0 chr2 182606489 182606517 -68081337 + GC_rich Low_complexity Low_complexity 1 28 0 182 57 0 94 chr2 182606546 182606599 -68081255 + (CCCGG)n Simple_repeat Simple_repeat 3 50 0 239 260 10 40 chr2 182606628 182606728 -68081126 + CT-rich Low_complexity Low_complexity 2 98 0 29 70 0 0 chr2 182606779 182606836 -68081018 + GC_rich Low_complexity Low_complexity 1 57 0 234 0 0 0 chr2 182610226 182610252 -68077602 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2207 97 4 0 chr2 182611901 182612216 -68075638 + AluSx SINE Alu 5 320 0 300 313 136 0 chr2 182612424 182612571 -68075283 + MIR SINE MIR 96 262 0 233 258 0 30 chr2 182614227 182614293 -68073561 + G-rich Low_complexity Low_complexity 4 67 0 537 138 0 0 chr2 182614695 182614789 -68073065 + (TC)n Simple_repeat Simple_repeat 1 94 0 261 0 0 0 chr2 182615001 182615030 -68072824 + (A)n Simple_repeat Simple_repeat 1 29 0 211 196 0 0 chr2 182618791 182618837 -68069017 + (CGG)n Simple_repeat Simple_repeat 1 46 0 242 209 0 15 chr2 182618953 182619046 -68068808 + (CGG)n Simple_repeat Simple_repeat 1 91 0 285 151 0 0 chr2 182619150 182619203 -68068651 + (CGG)n Simple_repeat Simple_repeat 2 54 0 21 0 0 0 chr2 182619454 182619475 -68068379 + GC_rich Low_complexity Low_complexity 1 21 0 278 140 35 0 chr2 182621118 182621175 -68066679 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 29 0 0 0 chr2 182621575 182621604 -68066250 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 182623368 182623396 -68064458 + AT_rich Low_complexity Low_complexity 1 28 0 871 193 17 11 chr2 182624660 182624836 -68063018 - MER45A DNA AcHobo -1 177 1 200 111 28 0 chr2 182626637 182626673 -68061181 + (CCCCAA)n Simple_repeat Simple_repeat 4 40 0 491 235 61 0 chr2 182626881 182626996 -68060858 - MIR SINE MIR -22 240 119 229 250 0 0 chr2 182628438 182628486 -68059368 + L2 LINE L2 3266 3313 0 207 0 0 0 chr2 182629030 182629053 -68058801 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 456 251 144 24 chr2 182629477 182629644 -68058210 + MIR SINE MIR 51 237 -25 227 284 11 57 chr2 182629949 182630037 -68057817 - L2 LINE L2 -15 3298 3215 393 219 8 81 chr2 182630037 182630160 -68057694 - MIR SINE MIR -71 191 78 379 279 162 0 chr2 182630435 182630571 -68057283 + MIR SINE MIR 104 261 -1 538 272 39 22 chr2 182632938 182633118 -68054736 + MIR SINE MIR 69 251 -11 219 69 0 0 chr2 182633347 182633376 -68054478 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2307 85 26 7 chr2 182633426 182633733 -68054121 - AluSp SINE Alu 0 313 1 340 293 106 13 chr2 182633821 182633996 -68053858 + MIR SINE MIR 30 217 -45 22 0 0 0 chr2 182635767 182635789 -68052065 + AT_rich Low_complexity Low_complexity 1 22 0 1786 238 47 4 chr2 182636221 182636434 -68051420 - L1ME3A LINE L1 -11 6159 5947 468 285 36 30 chr2 182636434 182636771 -68051083 - L1MB3 LINE L1 -252 5931 5593 1165 262 32 112 chr2 182636797 182637270 -68050584 + L2 LINE L2 2739 3172 -141 715 192 0 8 chr2 182637270 182637400 -68050454 - FLAM_A SINE Alu -4 129 1 1165 262 32 112 chr2 182637400 182637532 -68050322 + L2 LINE L2 3172 3313 0 348 262 77 26 chr2 182637580 182637746 -68050108 + MIR SINE MIR 32 211 -51 413 222 89 122 chr2 182638066 182638336 -68049518 - MIR SINE MIR 0 262 2 393 236 56 87 chr2 182638662 182638823 -68049031 + L1MC5 LINE L1 6909 7064 -897 2331 98 3 3 chr2 182638829 182639125 -68048729 + AluSx SINE Alu 6 301 -11 5172 152 25 57 chr2 182639144 182639187 -68048667 - L1MA10 LINE L1 -7 6327 6284 2202 110 3 0 chr2 182639187 182639478 -68048376 - AluSq SINE Alu -16 297 6 5172 152 25 57 chr2 182639478 182640342 -68047512 - L1MA10 LINE L1 -50 6284 5394 1821 107 21 4 chr2 182640342 182640585 -68047269 - AluSx SINE Alu -57 255 9 5172 152 25 57 chr2 182640585 182640711 -68047143 - L1MA10 LINE L1 -940 5394 5330 2428 99 0 3 chr2 182640711 182641024 -68046830 - AluSx SINE Alu 0 312 1 5172 152 25 57 chr2 182641024 182641180 -68046674 - L1MA10 LINE L1 -1004 5330 5171 2237 218 50 41 chr2 182641181 182641981 -68045873 + L1MC5 LINE L1 7054 7860 -101 2548 208 85 11 chr2 182642085 182642734 -68045120 + L1ME2 LINE L1 5466 6162 -2 365 264 98 43 chr2 182643063 182643180 -68044674 + MIR3 SINE MIR 33 163 -45 2804 127 23 12 chr2 182643180 182643607 -68044247 + MSTB1 LTR MaLR 1 432 0 365 264 98 43 chr2 182643607 182643652 -68044202 + MIR3 SINE MIR 163 204 -4 706 266 139 12 chr2 182643774 182644033 -68043821 - L2 LINE L2 0 3313 3022 1649 208 26 42 chr2 182644055 182644435 -68043419 + MLT1A2 LTR MaLR 1 374 0 199 331 97 21 chr2 182644447 182644592 -68043262 + L2 LINE L2 2475 2630 -684 342 310 66 66 chr2 182644654 182644867 -68042987 + L2 LINE L2 2638 2850 -464 202 315 43 11 chr2 182645371 182645463 -68042391 - L3 LINE CR1 -5 1572 1478 2218 106 13 7 chr2 182646290 182646591 -68041263 + AluSq SINE Alu 1 303 -10 560 264 82 0 chr2 182646594 182646776 -68041078 - L3 LINE CR1 -137 1440 1244 2042 159 0 0 chr2 182646865 182647160 -68040694 + AluJb SINE Alu 1 295 -17 1040 147 6 0 chr2 182647326 182647483 -68040371 - FRAM SINE Alu -18 158 1 192 97 0 0 chr2 182647577 182647608 -68040246 + (TTTTTG)n Simple_repeat Simple_repeat 3 33 0 249 266 62 0 chr2 182648224 182648288 -68039566 + L2 LINE L2 3243 3310 -3 525 249 57 51 chr2 182648371 182648548 -68039306 - MER5B DNA MER1_type 0 178 1 228 333 96 30 chr2 182648552 182648687 -68039167 - MIR3 SINE MIR -58 150 7 574 211 32 5 chr2 182649229 182649439 -68038415 - MLT1H1 LTR MaLR 0 555 238 2616 43 0 46 chr2 182649446 182649772 -68038082 - AluY SINE Alu 0 311 1 2601 160 23 47 chr2 182649868 182649945 -68037909 - L1MB4 LINE L1 -126 6054 5977 1657 163 73 57 chr2 182649945 182650166 -68037688 - THE1C LTR MaLR 0 375 144 2416 94 3 0 chr2 182650166 182650474 -68037380 + AluSp SINE Alu 1 309 -4 1657 163 73 57 chr2 182650474 182650621 -68037233 - THE1C LTR MaLR -231 144 1 2601 160 23 47 chr2 182650621 182651173 -68036681 - L1MB4 LINE L1 -203 5977 5439 1846 161 0 7 chr2 182651173 182651479 -68036375 - AluJb SINE Alu 0 304 1 2601 160 23 47 chr2 182651479 182651584 -68036270 - L1MB4 LINE L1 -741 5439 5333 378 245 13 64 chr2 182651605 182651710 -68036144 - MLT1H1 LTR MaLR -319 276 188 740 199 68 12 chr2 182651710 182651871 -68035983 + FAM SINE Alu 1 170 -5 378 245 13 64 chr2 182651871 182651947 -68035907 - MLT1H1 LTR MaLR -407 188 110 2236 95 3 0 chr2 182652017 182652325 -68035529 + AluSp SINE Alu 1 309 0 2426 77 0 3 chr2 182652445 182652757 -68035097 + AluY SINE Alu 1 311 0 215 59 0 29 chr2 182652805 182652839 -68035015 + (TTTC)n Simple_repeat Simple_repeat 3 35 0 2207 119 10 3 chr2 182652841 182653151 -68034703 - AluSq SINE Alu -1 312 1 1030 187 0 0 chr2 182653170 182653336 -68034518 - FRAM SINE Alu 0 166 1 256 278 0 0 chr2 182653417 182653471 -68034383 + MIR SINE MIR 37 90 -118 189 255 43 0 chr2 182653480 182653527 -68034327 + L3 LINE CR1 1520 1568 -9 281 276 65 108 chr2 182653973 182654093 -68033761 - MIR SINE MIR -8 254 143 2143 117 0 19 chr2 182654093 182654402 -68033452 - AluSx SINE Alu -9 303 1 281 276 65 108 chr2 182654402 182654466 -68033388 - MIR SINE MIR -119 143 78 726 266 49 62 chr2 182654592 182654732 -68033122 - L1MCc LINE L1 -4454 2668 2528 1826 166 0 35 chr2 182654732 182655045 -68032809 + AluJb SINE Alu 1 302 -10 726 266 49 62 chr2 182655045 182655509 -68032345 - L1MCc LINE L1 -4594 2528 1924 1595 133 0 4 chr2 182655513 182655776 -68032078 - AluSg/x SINE Alu 0 312 71 1336 127 0 15 chr2 182655804 182656001 -68031853 + AluSg/x SINE Alu 99 292 -18 3403 254 68 38 chr2 182656001 182656130 -68031724 - L1MCc LINE L1 -4965 1458 1334 2230 135 42 20 chr2 182656130 182656486 -68031368 - THE1B LTR MaLR 0 364 1 3403 254 68 38 chr2 182656486 182657147 -68030707 - L1MCc LINE L1 -5089 1334 694 1879 171 3 3 chr2 182657147 182657451 -68030403 - AluJb SINE Alu -8 304 1 3403 254 68 38 chr2 182657451 182658059 -68029795 - L1MCc LINE L1 -5729 694 17 474 282 110 7 chr2 182658153 182658476 -68029378 - L1MC4a LINE L1 -347 5774 5525 1627 178 33 33 chr2 182659072 182659432 -68028422 + MER46B DNA MER2_type 2 236 0 252 293 147 19 chr2 182659650 182659807 -68028047 - L2 LINE L2 -211 3061 2885 276 310 94 56 chr2 182660201 182660520 -68027334 - MLT1K LTR MaLR -89 499 169 435 268 74 114 chr2 182660704 182660846 -68027008 + L2 LINE L2 2985 3131 -141 1996 140 18 9 chr2 182660846 182661181 -68026673 - MER44D DNA MER2_type 0 609 2 435 268 74 114 chr2 182661181 182661314 -68026540 + L2 LINE L2 3131 3250 -22 1469 181 3 63 chr2 182661314 182661629 -68026225 + AluJb SINE Alu 1 296 -16 435 268 74 114 chr2 182661629 182661651 -68026203 + L2 LINE L2 3250 3271 -1 22 35 0 0 chr2 182662130 182662159 -68025695 + AT_rich Low_complexity Low_complexity 1 29 0 2093 141 3 0 chr2 182662527 182662825 -68025029 + AluSx SINE Alu 1 299 -13 245 135 0 0 chr2 182663589 182663626 -68024228 + MIR SINE MIR 106 142 -120 574 244 194 9 chr2 182663673 182663890 -68023964 - MIR SINE MIR 0 262 6 1914 162 0 10 chr2 182664993 182665289 -68022565 + AluJb SINE Alu 1 293 -19 23 0 0 0 chr2 182665571 182665594 -68022260 + AT_rich Low_complexity Low_complexity 1 23 0 804 256 79 9 chr2 182667783 182668010 -68019844 - MIR SINE MIR -14 248 6 2193 99 7 0 chr2 182668204 182668540 -68019314 - AluSx SINE Alu 0 312 1 23 78 0 0 chr2 182668542 182668593 -68019261 + AT_rich Low_complexity Low_complexity 1 51 0 2153 116 3 3 chr2 182668720 182669021 -68018833 - AluSx SINE Alu -11 301 1 29 28 0 0 chr2 182669667 182669703 -68018151 + AT_rich Low_complexity Low_complexity 1 36 0 2018 150 0 0 chr2 182670050 182670344 -68017510 + AluJb SINE Alu 1 294 -18 776 174 0 8 chr2 182670495 182670616 -68017238 + FLAM_A SINE Alu 1 120 -13 23 0 0 0 chr2 182674552 182674575 -68013279 + AT_rich Low_complexity Low_complexity 1 23 0 206 250 0 0 chr2 182676330 182676382 -68011472 + A-rich Low_complexity Low_complexity 1 52 0 1736 132 6 75 chr2 182676595 182676914 -68010940 - AluJb SINE Alu -15 297 1 885 208 88 13 chr2 182677110 182677418 -68010436 - LTR37A LTR ERV1 0 426 96 22 70 0 0 chr2 182677452 182677495 -68010359 + AT_rich Low_complexity Low_complexity 1 43 0 319 276 197 8 chr2 182677496 182677623 -68010231 - L2 LINE L2 -6 3266 3116 441 0 0 0 chr2 182678114 182678163 -68009691 + (TG)n Simple_repeat Simple_repeat 1 49 0 1765 155 0 24 chr2 182678165 182678455 -68009399 - AluJb SINE Alu -26 286 4 966 175 11 14 chr2 182679269 182679560 -68008294 - LTR2B LTR ERV1 0 490 127 1227 47 0 0 chr2 182679565 182679713 -68008141 - AluY SINE Alu -16 295 148 241 289 124 8 chr2 182679718 182679839 -68008015 - LTR2 LTR ERV1 -314 135 1 655 244 72 59 chr2 182679937 182680244 -68007610 - LTR16A1 LTR ERVL 0 457 147 404 278 152 31 chr2 182680384 182680803 -68007051 + MLT1J LTR MaLR 16 511 0 213 268 49 24 chr2 182680808 182680931 -68006923 + L2 LINE L2 3118 3243 -70 603 362 132 16 chr2 182681031 182681456 -68006398 + L3b LINE CR1 1102 1575 -8 1560 115 0 0 chr2 182681782 182681982 -68005872 - AluSx SINE Alu -112 200 1 761 207 55 9 chr2 182682624 182682841 -68005013 + L1MDb LINE L1 1153 1379 -5030 2350 93 0 6 chr2 182682879 182683191 -68004663 + AluSg SINE Alu 1 310 0 3035 231 52 25 chr2 182683197 182683761 -68004093 + L1MDb LINE L1 2436 2983 -3423 2171 110 7 0 chr2 182683761 182684061 -68003793 - AluSx SINE Alu -10 302 1 2246 108 7 0 chr2 182684065 182684360 -68003494 - AluSx SINE Alu -15 297 1 3035 231 52 25 chr2 182684360 182684883 -68002971 + L1MDb LINE L1 2985 3558 -2848 2219 111 3 0 chr2 182684890 182685187 -68002667 + AluSx SINE Alu 1 298 -14 633 158 11 107 chr2 182685187 182685364 -68002490 + MLT1G LTR MaLR 133 292 -238 799 213 6 6 chr2 182685387 182685556 -68002298 - MER3 DNA MER1_type 0 209 41 658 200 12 44 chr2 182685550 182685710 -68002144 + MLT1G LTR MaLR 377 531 -59 * 930 117 29 0 chr2 182685714 182685851 -68002003 + AluSp SINE Alu 1 141 -172 276 98 0 0 chr2 182686304 182686345 -68001509 - MSTA LTR MaLR 0 428 388 2435 71 0 16 chr2 182686345 182686654 -68001200 + AluSx SINE Alu 1 304 -8 185 111 56 0 chr2 182686665 182686701 -68001153 + A-rich Low_complexity Low_complexity 5 42 0 1507 178 35 6 chr2 182686701 182687015 -68000839 - MSTA LTR MaLR -27 401 79 1280 216 68 42 chr2 182687123 182687503 -68000351 + L1ME1 LINE L1 5436 5825 -341 986 126 115 6 chr2 182687511 182687680 -68000174 - MSTA LTR MaLR -1 427 239 2309 94 0 10 chr2 182687680 182687988 -67999866 - AluSg SINE Alu -5 305 1 335 318 8 16 chr2 182688148 182688277 -67999577 - HAL1 LINE L1 -755 1752 1625 639 71 0 0 chr2 182688280 182688365 -67999489 + (TTCC)n Simple_repeat Simple_repeat 4 88 0 8406 113 32 25 chr2 182688465 182690003 -67997851 - L1P LINE L1 -3910 2236 689 1425 154 3 48 chr2 182690167 182690459 -67997395 - AluJb SINE Alu -30 282 4 1104 251 81 9 chr2 182690459 182690805 -67997049 - MER74B LTR ERVL -189 433 63 245 322 52 0 chr2 182690833 182691007 -67996847 - L1M4 LINE L1 -1198 4948 4766 2150 137 0 7 chr2 182691171 182691470 -67996384 + AluSg SINE Alu 1 297 -13 841 125 17 0 chr2 182691486 182691606 -67996248 + AluJb SINE Alu 177 298 -14 447 175 0 61 chr2 182691606 182691720 -67996134 + L1MA10 LINE L1 6113 6219 -115 7612 39 2 3 chr2 182691879 182693003 -67994851 + L1P1 LINE L1 4392 5514 -641 7973 54 5 3 chr2 182693103 182694898 -67992956 - L1PA7 LINE L1 -47 6107 4310 217 375 31 10 chr2 182695337 182695433 -67992421 + MIR SINE MIR 15 112 -150 660 204 115 90 chr2 182695498 182695856 -67991998 + MSTC LTR MaLR 3 425 -3 263 237 0 26 chr2 182695868 182695896 -67991958 - MER46A DNA MER2_type -66 170 145 927 186 12 0 chr2 182695896 182696063 -67991791 + Tigger4(Zombi) DNA MER2_type 1 169 -2562 * 1442 133 17 4 chr2 182696054 182696287 -67991567 + Tigger4(Zombi) DNA MER2_type 1463 1698 -1033 827 206 73 90 chr2 182697044 182697565 -67990289 - MLT1G LTR MaLR 0 555 50 503 286 23 75 chr2 182698237 182698586 -67989268 - HERVL40 LTR ERVL -2516 3014 2684 225 316 44 0 chr2 182698594 182698708 -67989146 + HAL1 LINE L1 1335 1453 -1054 579 122 50 13 chr2 182698710 182698932 -67988922 + GA-rich Low_complexity Low_complexity 1 230 0 941 122 115 0 chr2 182698939 182699078 -67988776 + AluSx SINE Alu 1 155 -157 1995 203 40 88 chr2 182701953 182702315 -67985539 - MLT1E2 LTR MaLR 0 626 296 1860 114 0 77 chr2 182702315 182702638 -67985216 - AluSx SINE Alu 0 307 8 1995 203 40 88 chr2 182702638 182702921 -67984933 - MLT1E2 LTR MaLR -330 296 1 415 275 37 37 chr2 182703148 182703337 -67984517 + L1ME3A LINE L1 3603 3791 -2355 * 1423 266 64 61 chr2 182703315 182704177 -67983677 + L1ME3A LINE L1 4780 5651 -519 195 42 0 0 chr2 182704177 182704201 -67983653 + (TA)n Simple_repeat Simple_repeat 2 25 0 1423 266 64 61 chr2 182704201 182704490 -67983364 + L1ME3A LINE L1 5651 5937 -233 212 286 14 29 chr2 182705161 182705231 -67982623 - MER5A DNA MER1_type -94 95 27 319 286 0 40 chr2 182705275 182705401 -67982453 + MER5B DNA MER1_type 29 149 -29 632 135 0 10 chr2 182705451 182705555 -67982299 - AluSp/q SINE Alu -14 299 197 843 305 125 23 chr2 182705662 182706406 -67981448 + L2 LINE L2 2238 3064 -208 271 246 236 0 chr2 182706745 182706855 -67980999 + L2 LINE L2 3164 3299 -14 354 224 174 0 chr2 182706982 182707080 -67980774 + MIR SINE MIR 83 197 -65 243 194 23 9 chr2 182707219 182707289 -67980565 - Alu SINE Alu -12 154 108 205 186 0 0 chr2 182707752 182707795 -67980059 + A-rich Low_complexity Low_complexity 1 43 0 706 241 72 34 chr2 182710581 182710788 -67977066 - MIR SINE MIR 0 262 48 2155 110 0 13 chr2 182710953 182711253 -67976601 + AluSx SINE Alu 1 296 -16 657 237 53 32 chr2 182711527 182711717 -67976137 - MIR SINE MIR -16 246 53 300 286 8 84 chr2 182712194 182712313 -67975541 + MIR3 SINE MIR 54 163 -45 2499 68 0 6 chr2 182712547 182712858 -67974996 - AluSg1 SINE Alu 0 309 1 321 244 22 33 chr2 182712860 182712950 -67974904 + MIR SINE MIR 73 161 -101 693 152 0 9 chr2 182712977 182713089 -67974765 + AluSx SINE Alu 1 111 -201 213 224 9 56 chr2 182713212 182713319 -67974535 + (CGGGG)n Simple_repeat Simple_repeat 1 102 0 28 61 0 0 chr2 182713392 182713441 -67974413 + GC_rich Low_complexity Low_complexity 1 49 0 215 233 0 0 chr2 182713454 182713527 -67974327 + G-rich Low_complexity Low_complexity 1 73 0 279 0 0 0 chr2 182713591 182713622 -67974232 + (CA)n Simple_repeat Simple_repeat 2 32 0 269 233 17 0 chr2 182714719 182714779 -67973075 + MIR SINE MIR 91 151 -111 238 294 22 22 chr2 182714782 182714874 -67972980 - MIR SINE MIR -87 175 84 1992 146 3 0 chr2 182715221 182715523 -67972331 + AluSx SINE Alu 7 309 -3 2402 92 0 0 chr2 182716108 182716413 -67971441 + AluSg SINE Alu 1 305 -5 1439 94 16 0 chr2 182716613 182716805 -67971049 + AluSx SINE Alu 106 300 -12 392 179 13 0 chr2 182717044 182717122 -67970732 + MER116 DNA Mariner 2 80 0 27 0 0 0 chr2 182717498 182717525 -67970329 + AT_rich Low_complexity Low_complexity 1 27 0 1585 117 61 0 chr2 182717525 182717772 -67970082 - AluSx SINE Alu -20 292 31 28 0 0 0 chr2 182718111 182718139 -67969715 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 182718700 182718724 -67969130 + AT_rich Low_complexity Low_complexity 1 24 0 2850 102 31 2 chr2 182720960 182721380 -67966474 - MSTB1 LTR MaLR 0 432 1 820 225 12 17 chr2 182722778 182722951 -67964903 + AluJb SINE Alu 134 305 -7 5588 232 89 19 chr2 182722951 182723386 -67964468 - L1M4 LINE L1 -832 5314 4911 2056 110 0 42 chr2 182723386 182723694 -67964160 + AluSg SINE Alu 1 295 -15 5588 232 89 19 chr2 182723694 182725107 -67962747 - L1M4 LINE L1 -1235 4911 3338 2088 96 3 7 chr2 182725110 182725429 -67962425 - AluSx SINE Alu 0 318 1 1954 159 3 0 chr2 182725583 182725878 -67961976 - AluJb SINE Alu -16 296 1 2114 78 0 8 chr2 182726110 182726378 -67961476 + AluY SINE Alu 1 266 -45 1819 168 0 32 chr2 182726649 182726965 -67960889 - AluSx SINE Alu -6 306 1 631 289 56 69 chr2 182727478 182727500 -67960354 - L1 LINE L1 -1806 4340 4319 4620 31 4 0 chr2 182727500 182728050 -67959804 - L1PA4 LINE L1 0 6155 5604 631 289 56 69 chr2 182728050 182728578 -67959276 - L1 LINE L1 -1827 4319 3797 392 297 128 28 chr2 182728666 182728993 -67958861 - L1 LINE L1 -3129 3017 2658 386 231 10 19 chr2 182729166 182729270 -67958584 - L1MD2 LINE L1 -13 6346 6244 1551 153 75 25 chr2 182729275 182729596 -67958258 + MER44D DNA MER2_type 3 609 0 4756 187 38 15 chr2 182729749 182730710 -67957144 - L1MD2 LINE L1 -109 6250 5255 2167 96 10 7 chr2 182730710 182731003 -67956851 + AluSg SINE Alu 1 294 -16 4756 187 38 15 chr2 182731003 182731282 -67956572 - L1MD2 LINE L1 -1104 5255 4984 338 306 80 15 chr2 182731457 182731656 -67956198 - L1 LINE L1 -3823 2323 2112 22 35 0 0 chr2 182732374 182732403 -67955451 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 182732466 182732490 -67955364 + AT_rich Low_complexity Low_complexity 1 24 0 889 158 0 0 chr2 182732491 182732624 -67955230 + AluJb SINE Alu 1 133 -179 953 179 0 46 chr2 182733241 182733436 -67954418 - MLT1F LTR MaLR -8 534 349 1005 237 24 80 chr2 182733780 182734118 -67953736 - MLT1F LTR MaLR -223 344 4 2315 101 7 0 chr2 182734255 182734563 -67953291 - AluSx SINE Alu -2 310 1 27 0 0 0 chr2 182735392 182735419 -67952435 + AT_rich Low_complexity Low_complexity 1 27 0 1972 101 7 42 chr2 182735603 182735911 -67951943 - AluSx SINE Alu -15 297 1 317 197 63 99 chr2 182736062 182736204 -67951650 - L1MC5 LINE L1 -283 7678 7542 489 300 36 120 chr2 182736230 182736647 -67951207 + L2 LINE L2 979 1360 -1954 200 140 53 35 chr2 182736653 182736710 -67951144 + (CAAAC)n Simple_repeat Simple_repeat 2 59 0 187 239 197 0 chr2 182736742 182736813 -67951041 + L2 LINE L2 1368 1452 -1862 707 220 108 15 chr2 182736818 182737102 -67950752 + MER2 DNA MER2_type 2 345 0 2160 312 142 35 chr2 182737162 182737758 -67950096 + L2 LINE L2 1517 2048 -1266 767 200 116 32 chr2 182737758 182737948 -67949906 + MER3 DNA MER1_type 3 208 -1 2160 312 142 35 chr2 182737948 182738235 -67949619 + L2 LINE L2 2048 2303 -1011 2108 178 61 74 chr2 182738235 182738762 -67949092 - MLT2B1 LTR ERVL 0 520 1 2160 312 142 35 chr2 182738762 182739135 -67948719 + L2 LINE L2 2303 2909 -405 1970 140 0 7 chr2 182739154 182739463 -67948391 - AluSx SINE Alu 0 307 1 1598 91 43 0 chr2 182739498 182739730 -67948124 + L1MA1 LINE L1 6055 6296 -6 621 235 54 25 chr2 182739849 182740053 -67947801 - L1M4 LINE L1 -1955 4191 3982 21 0 0 0 chr2 182740163 182740184 -67947670 + AT_rich Low_complexity Low_complexity 1 21 0 10699 176 68 18 chr2 182740531 182742683 -67945171 + Cheshire DNA MER1_type 15 2058 -362 1336 182 0 4 chr2 182742683 182742919 -67944935 + MER46A DNA MER2_type 2 236 0 10699 176 68 18 chr2 182742919 182742976 -67944878 + Cheshire DNA MER1_type 2058 2111 -309 1998 137 14 0 chr2 182742976 182743268 -67944586 + AluSx SINE Alu 1 296 -16 10699 176 68 18 chr2 182743268 182743349 -67944505 + Cheshire DNA MER1_type 2111 2420 0 28 0 0 0 chr2 182743600 182743628 -67944226 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 182744437 182744464 -67943390 + AT_rich Low_complexity Low_complexity 1 27 0 1604 109 5 0 chr2 182746152 182746372 -67941482 - AluSq SINE Alu -10 303 83 2188 186 112 23 chr2 182746830 182747393 -67940461 - MER99 DNA DNA -8 820 208 911 124 48 0 chr2 182747987 182748132 -67939722 + MER30 DNA MER1_type 79 230 0 291 232 43 0 chr2 182748137 182748206 -67939648 - MER99 DNA DNA -753 75 4 234 297 59 34 chr2 182748258 182748376 -67939478 - MIR SINE MIR -31 231 111 700 193 40 40 chr2 182748782 182748826 -67939028 - MER3 DNA MER1_type -33 129 86 2056 98 25 0 chr2 182748826 182749129 -67938725 + AluSx SINE Alu 1 310 0 700 193 40 40 chr2 182749129 182749259 -67938595 - MER3 DNA MER1_type -75 87 1 22 80 0 0 chr2 182751055 182751105 -67936749 + AT_rich Low_complexity Low_complexity 1 50 0 38628 74 10 7 chr2 182751479 182757596 -67930258 - L1PA3 LINE L1 -4 6151 11 1624 273 183 22 chr2 182757620 182757817 -67930037 - L2 LINE L2 -1674 1640 1476 2162 126 0 0 chr2 182757817 182758111 -67929743 - AluSx SINE Alu -18 294 1 1624 273 183 22 chr2 182758111 182758497 -67929357 - L2 LINE L2 -1838 1476 1153 643 237 111 0 chr2 182758497 182758687 -67929167 + MER58C DNA MER1_type 1 211 -4 1624 273 183 22 chr2 182758687 182758872 -67928982 - L2 LINE L2 -2161 1153 747 1900 157 7 3 chr2 182758890 182759189 -67928665 - AluJb SINE Alu -12 300 1 406 268 89 8 chr2 182759637 182759760 -67928094 - MLT1G1 LTR MaLR 0 595 463 398 189 180 0 chr2 182759774 182759885 -67927969 - MLT1G1 LTR MaLR -187 355 225 252 193 11 102 chr2 182759977 182760065 -67927789 - MLT1G1 LTR MaLR -487 80 1 300 234 65 56 chr2 182760751 182760858 -67926996 - MLT1E2 LTR MaLR -517 109 2 384 343 97 42 chr2 182761422 182762019 -67925835 - L2 LINE L2 -626 2688 2059 440 351 37 27 chr2 182762077 182762334 -67925520 + MIR SINE MIR 2 258 -4 188 383 42 25 chr2 182762931 182763051 -67924803 - L3 LINE CR1 -454 1123 1002 5886 83 24 4 chr2 182763092 182763576 -67924278 + L1PB1 LINE L1 5290 5800 -351 234 0 0 0 chr2 182763576 182763602 -67924252 + (TA)n Simple_repeat Simple_repeat 2 27 0 5886 83 24 4 chr2 182763602 182763961 -67923893 + L1PB1 LINE L1 5800 6150 -1 403 315 129 30 chr2 182764346 182764578 -67923276 - MIR SINE MIR -2 260 6 1373 119 96 4 chr2 182764650 182764910 -67922944 - L1MA4 LINE L1 -5 6295 6012 506 309 133 0 chr2 182766176 182766357 -67921497 - MIR SINE MIR -56 206 2 919 142 147 26 chr2 182766669 182766859 -67920995 - MER58A DNA MER1_type -11 213 1 23 0 0 0 chr2 182767407 182767430 -67920424 + AT_rich Low_complexity Low_complexity 1 23 0 1911 145 16 3 chr2 182769656 182769960 -67917894 - AluSx SINE Alu -4 308 1 438 287 18 0 chr2 182770169 182770333 -67917521 + AluSq SINE Alu 80 246 -67 39 38 0 0 chr2 182770866 182770919 -67916935 + AT_rich Low_complexity Low_complexity 1 53 0 5111 209 35 75 chr2 182770946 182772894 -67914960 - L1MEc LINE L1 -1587 4628 2759 972 166 0 9 chr2 182772900 182773066 -67914788 + MER2 DNA MER2_type 14 175 -162 1875 249 71 40 chr2 182773066 182773466 -67914388 - L1MEc LINE L1 -4533 1863 1477 2431 88 0 3 chr2 182773466 182773773 -67914081 - AluSc SINE Alu -1 308 3 1875 249 71 40 chr2 182773773 182774042 -67913812 - L1MEc LINE L1 -4919 1477 1218 1869 149 0 11 chr2 182774042 182774318 -67913536 - AluJb SINE Alu -37 275 3 1875 249 71 40 chr2 182774318 182775284 -67912570 - L1MEc LINE L1 -5178 1218 36 22 0 0 0 chr2 182776246 182776268 -67911586 + AT_rich Low_complexity Low_complexity 1 22 0 371 202 83 0 chr2 182776441 182776525 -67911329 + MER103 DNA DNA 30 120 -46 24 53 0 0 chr2 182776669 182776707 -67911147 + AT_rich Low_complexity Low_complexity 1 38 0 493 261 39 50 chr2 182777171 182777351 -67910503 + MER5B DNA MER1_type 1 178 0 25 31 0 0 chr2 182777562 182777594 -67910260 + AT_rich Low_complexity Low_complexity 1 32 0 2229 95 10 3 chr2 182781258 182781554 -67906300 + AluSg SINE Alu 1 298 -12 207 125 0 0 chr2 182784588 182784628 -67903226 + (CCCA)n Simple_repeat Simple_repeat 2 41 0 246 32 0 0 chr2 182784995 182785026 -67902828 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr2 182786771 182786792 -67901062 + (T)n Simple_repeat Simple_repeat 1 21 0 351 277 88 15 chr2 182786872 182787009 -67900845 + MIR SINE MIR 79 225 -37 585 262 146 33 chr2 182787857 182788132 -67899722 + L2 LINE L2 2997 3302 -11 327 323 242 13 chr2 182788127 182788511 -67899343 + L2 LINE L2 1910 2381 -933 * 330 333 72 13 chr2 182788674 182788827 -67899027 - MIR SINE MIR 0 262 101 1519 185 130 3 chr2 182788831 182789177 -67898677 - MSTD LTR MaLR -6 390 1 302 333 29 10 chr2 182789179 182789281 -67898573 - MIR SINE MIR -157 105 2 * 456 322 63 68 chr2 182789281 182789414 -67898440 + L2 LINE L2 2572 2704 -610 2239 107 3 10 chr2 182789414 182789724 -67898130 + AluSp SINE Alu 1 308 -5 456 322 63 68 chr2 182789724 182789983 -67897871 + L2 LINE L2 2704 2962 -352 1717 132 84 100 chr2 182790422 182790861 -67896993 + MSTB1 LTR MaLR 1 432 0 208 262 167 24 chr2 182792220 182792304 -67895550 - MIR SINE MIR -11 251 156 329 321 12 12 chr2 182792562 182792646 -67895208 + L2 LINE L2 3139 3222 -50 1928 120 39 0 chr2 182794036 182794319 -67893535 + AluSx SINE Alu 1 294 -18 2048 118 3 3 chr2 182794321 182794608 -67893246 + AluSx SINE Alu 1 287 -25 2280 104 0 0 chr2 182794724 182795022 -67892832 - AluSq SINE Alu -15 298 1 1397 100 5 0 chr2 182795030 182795230 -67892624 - L1PA5 LINE L1 -3 6151 5951 293 248 97 44 chr2 182796950 182797063 -67890791 - L2 LINE L2 0 3272 3154 369 259 161 24 chr2 182797154 182797329 -67890525 + MIR SINE MIR 36 234 -28 2245 102 3 0 chr2 182798749 182799043 -67888811 + AluSg SINE Alu 1 295 -15 508 216 138 31 chr2 182799050 182799304 -67888550 + L1ME4a LINE L1 5826 6106 -15 476 332 89 9 chr2 182800248 182800462 -67887392 - MIR SINE MIR -6 256 26 12966 109 9 27 chr2 182800727 182803347 -67884507 + L1P3 LINE L1 8 2630 -3831 339 327 183 21 chr2 182804284 182804750 -67883104 - L2 LINE L2 -6 3266 2696 207 69 0 0 chr2 182805651 182805680 -67882174 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 903 173 0 0 chr2 182806496 182806629 -67881225 + FLAM_A SINE Alu 1 133 0 245 263 0 111 chr2 182806799 182806898 -67880956 - L2 LINE L2 -220 3093 3006 747 231 151 4 chr2 182807316 182807541 -67880313 - MIR SINE MIR 0 262 5 238 184 0 0 chr2 182807613 182807651 -67880203 - tRNA-Met-i tRNA tRNA -37 38 1 3867 108 4 66 chr2 182808040 182808602 -67879252 + MER1A DNA MER1_type 1 527 0 2147 127 0 0 chr2 182808826 182809118 -67878736 + AluSx SINE Alu 1 292 -20 1039 224 65 0 chr2 182809549 182809781 -67878073 + L1PB4 LINE L1 5892 6138 -18 750 300 42 34 chr2 182809781 182810138 -67877716 - MARNA DNA Mariner -44 542 183 1797 154 3 3 chr2 182810310 182810595 -67877259 + AluJo SINE Alu 1 285 -27 2847 10 0 0 chr2 182814405 182814712 -67873142 - AluYa5 SINE Alu -4 307 1 663 282 134 45 chr2 182815561 182816206 -67871648 - L2 LINE L2 -14 3299 2582 23 33 0 0 chr2 182817246 182817276 -67870578 + AT_rich Low_complexity Low_complexity 1 30 0 242 149 0 21 chr2 182817279 182817326 -67870528 + MER21A LTR ERV1 25 70 -861 431 128 26 0 chr2 182817355 182817433 -67870421 + Alu SINE Alu 231 310 0 3598 159 42 60 chr2 182817437 182818204 -67869650 + MER21A LTR ERV1 187 895 -36 279 204 21 43 chr2 182818611 182818704 -67869150 - L1MC4 LINE L1 -1339 6703 6613 792 128 0 34 chr2 182818705 182818973 -67868881 + (TA)n Simple_repeat Simple_repeat 1 258 0 22741 93 5 2 chr2 182818973 182822820 -67865034 - L1PA7 LINE L1 -15 6139 2314 22 0 0 0 chr2 182827199 182827221 -67860633 + AT_rich Low_complexity Low_complexity 1 22 0 340 179 0 123 chr2 182827364 182827470 -67860384 + MER5B DNA MER1_type 84 176 -2 315 277 24 0 chr2 182827483 182827566 -67860288 + L3b LINE CR1 1288 1372 -211 1821 119 16 0 chr2 182828228 182828479 -67859375 - L1PB4 LINE L1 -13 6143 5889 413 235 67 8 chr2 182829479 182829598 -67858256 - L1ME4a LINE L1 -32 6089 5964 602 253 120 26 chr2 182829877 182830185 -67857669 + L1ME4a LINE L1 5773 6109 -12 24 0 0 0 chr2 182832512 182832536 -67855318 + AT_rich Low_complexity Low_complexity 1 24 0 2172 123 0 0 chr2 182833051 182833352 -67854502 - AluSx SINE Alu -11 301 1 180 0 0 0 chr2 182833446 182833466 -67854388 + (TG)n Simple_repeat Simple_repeat 2 21 0 1502 81 62 5 chr2 182833566 182833777 -67854077 - L1PA14 LINE L1 0 6161 5939 914 281 136 25 chr2 182833854 182834259 -67853595 + L2 LINE L2 2246 2695 -619 499 240 13 26 chr2 182834259 182834413 -67853441 - L1MB8 LINE L1 0 6178 6027 208 284 27 14 chr2 182834447 182834521 -67853333 - MIR3 SINE MIR -21 187 113 1297 238 117 30 chr2 182834598 182835170 -67852684 + L2 LINE L2 2687 3313 0 503 262 40 104 chr2 182835487 182835785 -67852069 - Charlie8 DNA MER1_type -1001 1416 40 21 0 0 0 chr2 182836647 182836668 -67851186 + AT_rich Low_complexity Low_complexity 1 21 0 896 215 72 56 chr2 182836703 182836954 -67850900 + MIR SINE MIR 7 261 -1 307 320 39 8 chr2 182836983 182837111 -67850743 - MIR3 SINE MIR -21 187 56 523 268 0 0 chr2 182837244 182837356 -67850498 + L2 LINE L2 3197 3308 -5 469 252 28 35 chr2 182837658 182837844 -67850010 - MLT1I LTR MaLR -2 427 272 1896 129 3 34 chr2 182838601 182838895 -67848959 - AluJo SINE Alu -15 297 13 402 286 56 19 chr2 182839049 182839210 -67848644 + MIR3 SINE MIR 35 201 -7 1620 166 7 14 chr2 182839286 182839570 -67848284 + AluJo SINE Alu 1 282 -30 430 254 66 88 chr2 182841165 182841346 -67846508 - MER5B DNA MER1_type 0 178 2 349 232 0 0 chr2 182841359 182841428 -67846426 + MER5A DNA MER1_type 1 69 -120 803 251 34 0 chr2 182841503 182841682 -67846172 - MER5A DNA MER1_type -3 186 2 768 231 60 20 chr2 182842269 182842542 -67845312 - Charlie8 DNA MER1_type -2185 232 4 1853 128 46 56 chr2 182844136 182844442 -67843412 - AluSq SINE Alu -10 303 1 202 240 60 0 chr2 182844582 182844632 -67843222 + MIR SINE MIR 78 130 -78 326 259 222 32 chr2 182844942 182845127 -67842727 + MIR SINE MIR 37 256 -6 894 178 13 1 chr2 182845885 182846106 -67841748 - MLT1A1 LTR MaLR 0 365 110 280 303 59 46 chr2 182846279 182846361 -67841493 - L1MC/D LINE L1 -2241 5567 5481 1598 176 151 6 chr2 182846361 182846680 -67841174 + MLT1A1 LTR MaLR 1 365 0 280 303 59 46 chr2 182846680 182846749 -67841105 - L1MC/D LINE L1 -2327 5481 5414 1970 128 0 4 chr2 182847473 182847766 -67840088 - AluSx SINE Alu 0 302 11 2401 88 3 7 chr2 182848693 182849001 -67838853 - AluSq SINE Alu -6 307 1 413 298 45 99 chr2 182849003 182849245 -67838609 - L2 LINE L2 -12 3260 3032 2808 161 52 14 chr2 182849329 182849813 -67838041 - MLT1D LTR MaLR -3 502 1 581 281 60 38 chr2 182852732 182852967 -67834887 - MIR SINE MIR -15 247 8 1961 103 53 0 chr2 182853914 182854196 -67833658 - L1MA2 LINE L1 0 6304 6008 233 220 298 25 chr2 182854380 182854489 -67833365 + MIR SINE MIR 19 142 -66 491 281 32 53 chr2 182854550 182854835 -67833019 - L1M4 LINE L1 -3643 2503 2225 3026 90 4 31 chr2 182855138 182855594 -67832260 + L1PB2 LINE L1 5707 6150 -1 3886 91 25 4 chr2 182855902 182856462 -67831392 + L1PB1 LINE L1 5579 6150 -1 487 168 0 0 chr2 182856494 182856589 -67831265 + L1MD2 LINE L1 5373 5467 -775 1848 163 110 42 chr2 182856620 182857073 -67830781 + L1MD2 LINE L1 5864 6347 -12 186 143 0 57 chr2 182857349 182857384 -67830470 + MER5A DNA MER1_type 63 95 -94 671 101 0 10 chr2 182857685 182857784 -67830070 - LTR12 LTR ERV1 -133 581 484 270 242 63 0 chr2 182857784 182857879 -67829975 - LTR30 LTR ERV1 -70 652 552 537 150 96 53 chr2 182857880 182858079 -67829775 - LTR12 LTR ERV1 -430 1475 100 235 250 0 0 chr2 182858079 182858131 -67829723 - LTR30 LTR ERV1 -670 52 1 335 335 26 21 chr2 182858222 182858411 -67829443 - MIR3 SINE MIR -61 147 8 29 0 0 0 chr2 182860896 182860925 -67826929 + AT_rich Low_complexity Low_complexity 1 29 0 204 97 0 0 chr2 182862555 182862586 -67825268 + (TG)n Simple_repeat Simple_repeat 1 31 0 272 324 18 18 chr2 182862788 182862899 -67824955 - MIR SINE MIR -75 133 23 350 274 44 15 chr2 182863839 182863974 -67823880 - MIR SINE MIR -15 247 109 1252 195 108 36 chr2 182864327 182864743 -67823111 - HsTC2 DNA Tc2 0 1900 1279 352 217 123 58 chr2 182864753 182864891 -67822963 - HsTC2 DNA Tc2 -1750 148 2 2113 124 0 7 chr2 182864997 182865295 -67822559 + AluSx SINE Alu 1 296 -16 494 68 68 0 chr2 182865958 182866032 -67821822 + MADE1 DNA Mariner 2 80 0 514 244 184 37 chr2 182866054 182866271 -67821583 + MIR SINE MIR 7 255 -7 5333 72 1 0 chr2 182866399 182867083 -67820771 - L1PA8 LINE L1 0 6172 5488 292 314 35 12 chr2 182867273 182867359 -67820495 + MIR3 SINE MIR 5 92 -116 223 260 143 39 chr2 182867449 182867526 -67820328 - MIR SINE MIR -74 188 104 373 311 62 11 chr2 182867540 182867717 -67820137 + MIR SINE MIR 73 258 -4 215 351 0 0 chr2 182867711 182867785 -67820069 - MIR SINE MIR -153 109 36 * 1326 203 58 0 chr2 182868027 182868318 -67819536 - L1MB5 LINE L1 0 6174 5867 225 0 0 0 chr2 182869697 182869722 -67818132 + (TG)n Simple_repeat Simple_repeat 1 25 0 * 282 29 0 0 chr2 182869721 182869756 -67818098 + (GA)n Simple_repeat Simple_repeat 1 35 0 26 0 0 0 chr2 182870593 182870619 -67817235 + AT_rich Low_complexity Low_complexity 1 26 0 198 240 0 0 chr2 182870917 182870967 -67816887 + GA-rich Low_complexity Low_complexity 3 52 0 2151 109 3 22 chr2 182872814 182873127 -67814727 + AluSx SINE Alu 6 312 0 291 54 0 0 chr2 182873353 182873390 -67814464 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 325 158 0 66 chr2 182873402 182873478 -67814376 - AluJ/FRAM SINE Alu -2 300 230 1373 112 5 0 chr2 182873680 182873877 -67813977 - AluY SINE Alu -8 303 106 319 199 86 0 chr2 182873914 182874005 -67813849 - MLT2E LTR ERVL 0 628 550 2183 120 42 28 chr2 182874309 182874666 -67813188 + THE1B LTR MaLR 3 364 0 216 304 43 0 chr2 182874951 182875020 -67812834 - L2 LINE L2 -8 3305 3234 5454 99 7 13 chr2 182875051 182875889 -67811965 + L1MA4A LINE L1 5465 6297 -6 859 290 116 38 chr2 182876042 182876656 -67811198 + MLT2F LTR ERVL 1 662 -1 288 253 101 106 chr2 182876748 182876985 -67810869 - Charlie8 DNA MER1_type -2000 417 182 210 71 0 0 chr2 182877058 182877086 -67810768 + (CA)n Simple_repeat Simple_repeat 1 28 0 270 0 0 0 chr2 182877186 182877216 -67810638 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 198 0 0 0 chr2 182877344 182877366 -67810488 + (GA)n Simple_repeat Simple_repeat 1 22 0 269 330 0 43 chr2 182878573 182878688 -67809166 - L2 LINE L2 -4 3309 3200 2280 115 0 0 chr2 182879372 182879676 -67808178 - AluSx SINE Alu -8 304 1 270 291 153 37 chr2 182882307 182882496 -67805358 + L2 LINE L2 3100 3310 -3 299 293 27 0 chr2 182882758 182882833 -67805021 - L2 LINE L2 -3 3310 3234 229 286 32 32 chr2 182883248 182883374 -67804480 - L1M4 LINE L1 -1912 4303 4178 2491 222 67 25 chr2 182883480 182884680 -67803174 - L1MEc LINE L1 -3610 2605 1408 335 247 11 21 chr2 182884927 182885020 -67802834 - MIR SINE MIR -130 132 41 24 32 0 0 chr2 182885786 182885817 -67802037 + AT_rich Low_complexity Low_complexity 1 31 0 2807 214 55 41 chr2 182885817 182887048 -67800806 - L1ME1 LINE L1 -24 6142 4902 232 333 0 0 chr2 182887185 182887263 -67800591 - L2 LINE L2 0 3272 3195 577 212 33 76 chr2 182888184 182888331 -67799523 - MIR SINE MIR -11 251 112 1790 174 35 162 chr2 182888331 182889010 -67798844 + MLT1E LTR MaLR 1 593 0 577 212 33 76 chr2 182889010 182889046 -67798808 - MIR SINE MIR -150 112 76 1371 138 166 20 chr2 182889933 182890215 -67797639 - AluJb SINE Alu 0 318 1 604 194 25 135 chr2 182891358 182891595 -67796259 + MIR SINE MIR 52 262 0 243 0 0 0 chr2 182892414 182892441 -67795413 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 192 167 0 0 chr2 182895094 182895142 -67792712 + (CCTAT)n Simple_repeat Simple_repeat 5 52 0 185 159 23 0 chr2 182895136 182895180 -67792674 + (CATTC)n Simple_repeat Simple_repeat 5 49 0 * 954 89 0 0 chr2 182897186 182897309 -67790545 - AluSg/x SINE Alu -10 300 178 27 29 0 0 chr2 182897540 182897574 -67790280 + AT_rich Low_complexity Low_complexity 1 34 0 546 308 62 10 chr2 182897584 182897792 -67790062 - MIR SINE MIR -31 231 13 1797 225 159 8 chr2 182898385 182898975 -67788879 - L1ME1 LINE L1 -6 6160 5482 1805 160 18 3 chr2 182900679 182901022 -67786832 - L1PA16 LINE L1 -8 6158 5811 2506 67 3 0 chr2 182901162 182901474 -67786380 - AluSp SINE Alu 0 313 1 237 65 0 0 chr2 182901768 182901799 -67786055 + (T)n Simple_repeat Simple_repeat 1 31 0 213 298 0 0 chr2 182901809 182901866 -67785988 + L2 LINE L2 3216 3272 0 310 291 64 96 chr2 182902695 182902915 -67784939 + MIR SINE MIR 3 215 -47 269 192 0 0 chr2 182903218 182903270 -67784584 - MER94 DNA DNA -78 56 5 1120 236 92 69 chr2 182903571 182904063 -67783791 + MLT1D LTR MaLR 1 503 -2 268 321 28 28 chr2 182904111 182904217 -67783637 - L2 LINE L2 -10 3303 3198 698 213 0 0 chr2 182904437 182904564 -67783290 - FLAM_C SINE Alu -4 129 3 241 330 23 0 chr2 182904630 182904718 -67783136 + L2 LINE L2 2113 2202 -1112 991 195 144 83 chr2 182904740 182905150 -67782704 + MLT1C LTR MaLR 33 467 0 999 319 120 58 chr2 182905177 182906172 -67781682 + L2 LINE L2 2229 3272 0 266 304 165 0 chr2 182908312 182908427 -67779427 - L2 LINE L2 -8 3305 3172 663 228 114 0 chr2 182909153 182909320 -67778534 - MIR SINE MIR -4 258 73 300 242 44 11 chr2 182912226 182912317 -67775537 + (CACCAT)n Simple_repeat Simple_repeat 3 96 0 270 293 60 53 chr2 182912800 182912933 -67774921 + L2 LINE L2 3138 3271 -1 522 282 40 27 chr2 182912991 182913140 -67774714 - MIR3 SINE MIR -17 191 41 2255 146 0 37 chr2 182913241 182913591 -67774263 + MER1B DNA MER1_type 1 337 0 2188 102 23 0 chr2 182914181 182914484 -67773370 + AluSg SINE Alu 1 310 0 1741 176 109 0 chr2 182915022 182915335 -67772519 + MER7A DNA MER2_type 2 346 0 982 242 46 42 chr2 182916102 182916387 -67771467 - MLT1G LTR MaLR -20 570 285 2372 112 77 15 chr2 182916392 182916732 -67771122 - THE1B LTR MaLR -2 362 2 11400 89 35 1 chr2 182916740 182918261 -67769593 - THE1B-int LTR MaLR -7 1573 1 2401 117 76 15 chr2 182918261 182918604 -67769250 - THE1B LTR MaLR 0 364 1 1159 216 11 45 chr2 182918610 182918774 -67769080 - MLT1G LTR MaLR -331 259 106 2044 132 0 0 chr2 182918774 182919061 -67768793 + AluSg SINE Alu 1 287 -23 1159 216 11 45 chr2 182919061 182919164 -67768690 - MLT1G LTR MaLR -484 106 1 1312 262 41 57 chr2 182919289 182919800 -67768054 - MLT1J LTR MaLR -4 507 5 1775 172 138 15 chr2 182919837 182920383 -67767471 + MER39B LTR ERV1 2 595 -58 355 209 15 0 chr2 182920428 182920495 -67767359 - MER58 DNA MER1_type 0 2420 2353 785 197 95 16 chr2 182920502 182920905 -67766949 - MLT1D LTR MaLR 0 505 1 794 227 0 0 chr2 182920914 182921055 -67766799 - MER58A DNA MER1_type 0 143 3 327 356 45 23 chr2 182921228 182921360 -67766494 + L2 LINE L2 3137 3271 -1 1775 175 13 22 chr2 182923067 182923382 -67764472 - AluJo SINE Alu 0 312 1 2214 149 36 33 chr2 182923479 182923868 -67763986 + MLT1B LTR MaLR 1 390 0 1676 166 13 20 chr2 182923911 182924213 -67763641 - AluY SINE Alu -11 300 1 487 260 24 0 chr2 182924873 182924996 -67762858 - MER103 DNA DNA -38 128 3 372 346 126 31 chr2 182926570 182926856 -67760998 + L2 LINE L2 2305 2617 -697 180 111 0 0 chr2 182928599 182928626 -67759228 + (CA)n Simple_repeat Simple_repeat 1 27 0 717 295 85 26 chr2 182928914 182929375 -67758479 - L1ME4a LINE L1 -1 6189 5702 2948 13 0 0 chr2 182929375 182929693 -67758161 + AluYb8 SINE Alu 1 318 0 10755 63 41 2 chr2 182930547 182932090 -67755764 - L1P LINE L1 -959 5187 3585 8799 160 17 41 chr2 182932190 182932535 -67755319 + L1PB1 LINE L1 3544 3896 -2255 2362 81 0 0 chr2 182932535 182932839 -67755015 + AluY SINE Alu 1 304 0 8799 160 17 41 chr2 182932839 182934797 -67753057 + L1PB1 LINE L1 3896 5782 -369 207 0 0 0 chr2 182934799 182934822 -67753032 + (TA)n Simple_repeat Simple_repeat 2 24 0 30 0 0 0 chr2 182935191 182935221 -67752633 + GC_rich Low_complexity Low_complexity 1 30 0 29 0 0 0 chr2 182935254 182935283 -67752571 + GC_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 182935348 182935370 -67752484 + GC_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 182935618 182935640 -67752214 + AT_rich Low_complexity Low_complexity 1 22 0 1809 90 170 16 chr2 182935665 182935988 -67751866 + L1PB1 LINE L1 5777 6149 -2 7374 161 249 17 chr2 182935993 182937719 -67750135 + L1P LINE L1 3170 5295 -851 201 74 0 0 chr2 182937973 182938000 -67749854 + (A)n Simple_repeat Simple_repeat 1 27 0 705 322 139 22 chr2 182938204 182938706 -67749148 - L1ME4a LINE L1 -739 5500 4872 2949 9 0 0 chr2 182938706 182939022 -67748832 - AluYb8 SINE Alu -2 316 1 705 322 139 22 chr2 182939022 182939311 -67748543 - L1ME4a LINE L1 -1367 4872 4618 859 226 64 53 chr2 182940109 182940322 -67747532 - MER2 DNA MER2_type 0 345 127 2329 89 3 0 chr2 182940322 182940613 -67747241 + AluSc SINE Alu 1 292 -17 859 226 64 53 chr2 182940613 182940664 -67747190 - MER2 DNA MER2_type -218 127 78 25 90 0 0 chr2 182941655 182941722 -67746132 + AT_rich Low_complexity Low_complexity 1 67 0 368 280 51 51 chr2 182942830 182942987 -67744867 + L1ME LINE L1 5632 5788 -333 355 299 8 8 chr2 182943261 182943378 -67744476 + MIR SINE MIR 134 250 -12 210 318 127 67 chr2 182943450 182943749 -67744105 + L2 LINE L2 2849 3165 -107 1096 158 67 66 chr2 182944260 182944582 -67743272 - LTR37A LTR ERV1 0 426 44 1652 101 55 0 chr2 182944582 182944800 -67743054 + MER30 DNA MER1_type 1 230 0 1096 158 67 66 chr2 182944800 182944840 -67743014 - LTR37A LTR ERV1 -382 44 6 235 303 216 12 chr2 182944942 182945104 -67742750 - MIR SINE MIR -66 196 2 4301 235 48 22 chr2 182945868 182947156 -67740698 - L1ME4a LINE L1 -2312 3903 2582 1449 279 83 23 chr2 182947168 182947861 -67739993 - L1ME4a LINE L1 -4513 1883 1136 243 0 0 0 chr2 182947861 182947888 -67739966 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1449 279 83 23 chr2 182947888 182947975 -67739879 - L1ME4a LINE L1 -5260 1136 1056 * 7026 26 1 4 chr2 182947971 182948788 -67739066 - L1PA4 LINE L1 0 6155 5341 16549 140 12 100 chr2 182948912 182952506 -67735348 - L1P LINE L1 -2859 3287 9 243 103 0 0 chr2 182952522 182952561 -67735293 + (TTG)n Simple_repeat Simple_repeat 2 40 0 453 293 47 20 chr2 182952732 182952882 -67734972 - MIR SINE MIR -88 174 21 1242 122 13 52 chr2 182953267 182953496 -67734358 + L1PA15 LINE L1 5946 6165 0 233 256 91 58 chr2 182953756 182953922 -67733932 + MIR3 SINE MIR 10 180 -82 2554 196 97 0 chr2 182954144 182954650 -67733204 - MER68 LTR ERV1 -2 560 6 678 264 69 72 chr2 182955097 182955529 -67732325 - MLT1J1 LTR MaLR -15 431 1 12318 51 78 4 chr2 182956448 182958169 -67729685 + L1PA2 LINE L1 1 1849 -4297 205 143 18 54 chr2 182958179 182958235 -67729619 + A-rich Low_complexity Low_complexity 1 54 0 8591 30 2 1 chr2 182958239 182959330 -67728524 + L1PA2 LINE L1 3103 4194 -1952 7734 18 0 6 chr2 182959330 182960941 -67726913 + L1PA2 LINE L1 4550 6155 0 498 273 67 72 chr2 182961521 182961954 -67725900 - MLT1J1 LTR MaLR -15 431 1 415 73 29 0 chr2 182963282 182963350 -67724504 + (TTCC)n Simple_repeat Simple_repeat 2 71 0 513 301 122 20 chr2 182963669 182963965 -67723889 - L3 LINE CR1 -105 1472 1147 269 274 197 17 chr2 182964064 182964181 -67723673 + MIR SINE MIR 20 157 -105 840 280 75 70 chr2 182964246 182964795 -67723059 - L3 LINE CR1 -595 982 340 16781 40 2 3 chr2 182966687 182969004 -67718850 + L1P LINE L1 634 3076 -3070 3871 121 42 3 chr2 182969131 182969383 -67718471 + L1PA13 LINE L1 5514 5755 -408 405 0 0 0 chr2 182969383 182969428 -67718426 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 3871 121 42 3 chr2 182969428 182969801 -67718053 + L1PA13 LINE L1 5755 6163 0 971 178 11 11 chr2 182969803 182969994 -67717860 - L1MD1 LINE L1 -53 6189 5999 * 2517 240 49 18 chr2 182969992 182970849 -67717005 - L1MDa LINE L1 -2266 4274 3391 4728 194 50 17 chr2 182970853 182972608 -67715246 - L1MDa LINE L1 -3313 3227 1342 843 253 84 11 chr2 182972618 182972955 -67714899 + MLT1C LTR MaLR 105 467 0 1341 205 207 37 chr2 182972961 182973395 -67714459 - L1MDa LINE L1 -5417 1123 616 471 348 110 25 chr2 182973399 182973718 -67714136 - L2 LINE L2 -798 2516 2149 1680 172 20 26 chr2 182973718 182974049 -67713805 + AluJb SINE Alu 1 312 0 471 348 110 25 chr2 182974049 182974166 -67713688 - L2 LINE L2 -1165 2149 2043 569 270 48 32 chr2 182974855 182975044 -67712810 - MIR SINE MIR 0 262 71 496 341 78 46 chr2 182975590 182976024 -67711830 - L2 LINE L2 0 3272 2825 341 287 39 106 chr2 182976508 182976762 -67711092 - L2 LINE L2 -93 3179 2943 201 147 0 0 chr2 182976766 182976800 -67711054 + (TG)n Simple_repeat Simple_repeat 1 34 0 727 312 93 44 chr2 182976913 182977484 -67710370 - L2 LINE L2 -941 2373 1775 560 293 36 6 chr2 182980938 182981105 -67706749 + MIR SINE MIR 55 226 -36 29316 113 8 56 chr2 182981105 182984243 -67703611 + L1PA7 LINE L1 12 2682 -3472 2056 84 11 14 chr2 182984243 182984561 -67703293 + AluY SINE Alu 1 317 0 29316 113 8 56 chr2 182984561 182987874 -67699980 + L1PA7 LINE L1 2682 6150 -4 425 290 65 48 chr2 182987951 182988137 -67699717 + MER5A DNA MER1_type 1 189 0 338 217 14 0 chr2 182989491 182989560 -67698294 + MIR3 SINE MIR 136 205 -3 745 264 138 63 chr2 182989676 182990153 -67697701 + MLT1L LTR MaLR 8 520 -95 1606 138 11 11 chr2 182990168 182990451 -67697403 - MER44D DNA MER2_type 0 609 57 327 165 101 13 chr2 182990475 182990554 -67697300 + MLT1L LTR MaLR 424 613 -2 207 0 0 0 chr2 182991561 182991584 -67696270 + (CA)n Simple_repeat Simple_repeat 1 23 0 241 297 69 50 chr2 182991593 182991694 -67696160 - MIR3 SINE MIR -22 186 84 433 324 60 56 chr2 182991762 182991978 -67695876 - MIR SINE MIR -45 217 1 231 114 0 0 chr2 182993106 182993141 -67694713 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 1171 219 21 13 chr2 182993302 182993540 -67694314 + MIR SINE MIR 2 241 -21 688 264 54 42 chr2 182993530 182993769 -67694085 - MIR SINE MIR -17 245 4 * 579 224 99 31 chr2 182994548 182994709 -67693145 - MIR SINE MIR 0 262 91 658 289 111 17 chr2 182994802 182995152 -67692702 + MLT1J2 LTR MaLR 68 450 0 274 292 0 0 chr2 182995163 182995228 -67692626 - MIR SINE MIR -190 72 8 23 0 0 0 chr2 183002386 183002409 -67685445 + AT_rich Low_complexity Low_complexity 1 23 0 372 189 0 0 chr2 183003078 183003152 -67684702 + (TA)n Simple_repeat Simple_repeat 2 75 0 315 342 17 17 chr2 183003914 183004031 -67683823 + L2 LINE L2 3156 3272 0 302 276 41 10 chr2 183004346 183004444 -67683410 + MIR SINE MIR 79 179 -83 231 36 0 0 chr2 183004450 183004478 -67683376 + (TTA)n Simple_repeat Simple_repeat 2 29 0 24019 52 2 0 chr2 183004479 183007777 -67680077 - L1P LINE L1 -2220 3926 623 634 135 24 71 chr2 183007775 183007945 -67679909 - L1MEc LINE L1 -5292 1035 1 * 2187 108 0 3 chr2 183007946 183008233 -67679621 + AluY SINE Alu 2 287 -24 287 228 0 22 chr2 183008260 183008352 -67679502 - L1MC4 LINE L1 -1339 6703 6614 228 155 0 99 chr2 183008354 183008425 -67679429 + LTR66 LTR ERVL 394 457 -153 453 269 12 48 chr2 183008529 183008696 -67679158 + L1MEc LINE L1 35 195 -6201 183 42 0 0 chr2 183009647 183009671 -67678183 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 15541 96 5 2 chr2 183009708 183012573 -67675281 - L1PA7 LINE L1 -4 6150 3282 216 0 0 0 chr2 183012926 183012950 -67674904 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 38 89 0 0 chr2 183015207 183015308 -67672546 + AT_rich Low_complexity Low_complexity 1 101 0 304 256 68 34 chr2 183015432 183015549 -67672305 + MER5A DNA MER1_type 59 179 -10 * 1377 278 234 7 chr2 183015536 183016398 -67671456 + L2 LINE L2 2230 3312 -1 284 216 28 199 chr2 183016673 183016750 -67671104 + MER5B DNA MER1_type 1 33 -145 1601 124 11 34 chr2 183016750 183017015 -67670839 + L1MB3 LINE L1 5925 6183 0 284 216 28 199 chr2 183017015 183017113 -67670741 + MER5B DNA MER1_type 33 146 -32 2355 113 39 33 chr2 183017260 183017622 -67670232 + THE1B LTR MaLR 1 364 0 389 126 48 40 chr2 183017683 183017786 -67670068 - L1M4 LINE L1 -625 5549 5436 419 336 117 46 chr2 183018422 183018883 -67668971 + L3 LINE CR1 1003 1496 -81 2056 180 64 0 chr2 183018886 183019263 -67668591 - MSTB LTR MaLR 0 426 26 378 323 110 54 chr2 183021073 183021218 -67666636 + L2 LINE L2 2223 2358 -956 1602 150 0 59 chr2 183021218 183021524 -67666330 - AluJo SINE Alu -19 293 6 378 323 110 54 chr2 183021524 183021880 -67665974 + L2 LINE L2 2358 2752 -562 2873 9 0 9 chr2 183021901 183022219 -67665635 + AluYb8 SINE Alu 1 315 -3 1601 188 31 82 chr2 183022930 183023318 -67664536 + MLT1A2 LTR MaLR 1 368 -6 2528 67 0 0 chr2 183024096 183024396 -67663458 - AluY SINE Alu -11 300 1 699 181 254 27 chr2 183024519 183024779 -67663075 - MER5C DNA MER1_type 0 324 6 2408 98 0 0 chr2 183025961 183026266 -67661588 - AluSx SINE Alu -7 305 1 361 252 140 112 chr2 183026671 183026885 -67660969 + LTR67 LTR ERVL 3 222 -335 261 278 73 78 chr2 183026959 183027150 -67660704 + LTR67 LTR ERVL 368 557 0 549 328 38 5 chr2 183027413 183027599 -67660255 - MER91A DNA MER1_type -1 195 4 1467 220 46 80 chr2 183027802 183028262 -67659592 - MLT2B1 LTR ERVL -76 444 1 233 231 19 0 chr2 183028607 183028659 -67659195 - L2 LINE L2 0 3313 3261 43612 34 22 2 chr2 183029358 183035389 -67652465 - L1PA3 LINE L1 0 6155 1 813 228 9 36 chr2 183035756 183035960 -67651894 + AluJo SINE Alu 87 286 -26 2207 83 0 0 chr2 183035960 183036237 -67651617 + L1PB1 LINE L1 5874 6150 -1 813 228 9 36 chr2 183036237 183036251 -67651603 + AluJo SINE Alu 286 299 -13 22 0 0 0 chr2 183036388 183036410 -67651444 + AT_rich Low_complexity Low_complexity 1 22 0 326 120 0 2 chr2 183036514 183036563 -67651291 - MLT1I LTR MaLR -267 142 100 2555 62 0 0 chr2 183036713 183037018 -67650836 + AluY SINE Alu 2 306 -5 241 270 27 0 chr2 183037091 183037165 -67650689 - L3 LINE CR1 -356 1221 1146 562 258 0 16 chr2 183037194 183037318 -67650536 + L2 LINE L2 3150 3271 -1 815 316 69 43 chr2 183037326 183037817 -67650037 - L3 LINE CR1 -508 1069 566 262 296 188 34 chr2 183037882 183038058 -67649796 + MIR SINE MIR 50 252 -10 481 151 151 0 chr2 183038817 183038910 -67648944 - MER2 DNA MER2_type 0 345 239 667 239 0 0 chr2 183038912 183039042 -67648812 - MER2 DNA MER2_type -215 130 1 770 92 9 0 chr2 183039177 183039286 -67648568 + L1MB4 LINE L1 6070 6179 -1 485 212 66 66 chr2 183039295 183039446 -67648408 + L1MC4 LINE L1 7640 7790 -252 342 0 0 0 chr2 183041029 183041067 -67646787 + (TG)n Simple_repeat Simple_repeat 1 38 0 2828 150 5 14 chr2 183041071 183041113 -67646741 - Tigger2 DNA MER2_type 0 2718 2677 1976 118 80 47 chr2 183041113 183041476 -67646378 + THE1C LTR MaLR 1 375 0 2828 150 5 14 chr2 183041476 183041879 -67645975 - Tigger2 DNA MER2_type -41 2677 2277 302 163 0 0 chr2 183041854 183041897 -67645957 + MER8 DNA MER2_type 197 239 0 * 426 219 76 27 chr2 183041998 183042147 -67645707 - L1MC4 LINE L1 -1 8041 7767 2443 128 67 50 chr2 183043832 183044253 -67643601 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr2 183044903 183044927 -67642927 + AT_rich Low_complexity Low_complexity 1 24 0 1787 111 0 4 chr2 183045400 183045683 -67642171 + AluSc SINE Alu 37 318 0 1718 168 7 10 chr2 183046149 183046452 -67641402 + AluJo SINE Alu 1 302 -10 1084 151 13 86 chr2 183048377 183048609 -67639245 - MER20 DNA MER1_type -4 215 1 417 241 44 66 chr2 183049993 183050130 -67637724 + MER20B DNA MER1_type 1 134 -649 966 265 61 10 chr2 183050173 183050467 -67637387 + MER20B DNA MER1_type 226 534 -249 820 242 38 5 chr2 183051319 183051505 -67636349 - MIR SINE MIR 0 262 71 1379 233 29 61 chr2 183052940 183053474 -67634380 + L1MC5 LINE L1 6435 6959 -854 246 174 0 0 chr2 183053576 183053622 -67634232 + CT-rich Low_complexity Low_complexity 4 49 0 1016 180 17 0 chr2 183053739 183053911 -67633943 - FRAM SINE Alu -4 172 1 727 206 12 6 chr2 183053911 183054081 -67633773 + L1MC5 LINE L1 7004 7174 -787 774 214 0 0 chr2 183054088 183054214 -67633640 + FLAM_C SINE Alu 2 127 -16 2051 205 96 46 chr2 183054214 183054932 -67632922 + L1MC5 LINE L1 7164 7917 -44 2076 187 68 35 chr2 183055143 183055432 -67632422 - MLT1D LTR MaLR -7 498 220 304 22 44 0 chr2 183055432 183055477 -67632377 + (TA)n Simple_repeat Simple_repeat 1 47 0 2102 26 4 0 chr2 183055477 183055706 -67632148 - L1PA5 LINE L1 -15 6139 5910 2076 187 68 35 chr2 183055706 183055897 -67631957 - MLT1D LTR MaLR -284 221 1 231 335 124 39 chr2 183056057 183056388 -67631466 + L3b LINE CR1 1220 1578 -5 239 0 32 0 chr2 183057071 183057102 -67630752 + (TC)n Simple_repeat Simple_repeat 2 33 0 374 255 31 0 chr2 183058514 183058612 -67629242 - MIR SINE MIR -90 118 18 702 263 17 0 chr2 183059006 183059181 -67628673 + MER5A DNA MER1_type 4 181 -8 441 272 120 26 chr2 183059235 183059426 -67628428 + MIR SINE MIR 51 259 -3 362 301 118 29 chr2 183060375 183060562 -67627292 - MIR SINE MIR -12 250 51 1080 65 0 3 chr2 183060575 183060805 -67627049 - AluY SINE Alu -2 309 2 255 340 130 5 chr2 183061782 183061967 -67625887 + MIR SINE MIR 28 235 -27 716 243 189 49 chr2 183062250 183062641 -67625213 + MLT1J1 LTR MaLR 1 446 0 675 197 78 7 chr2 183062872 183063014 -67624840 + MER5A DNA MER1_type 17 168 -21 2000 151 19 80 chr2 183063297 183063709 -67624145 - MLT1B LTR MaLR -2 388 2 210 248 266 0 chr2 183064812 183064921 -67622933 - MIR SINE MIR 0 262 125 2458 180 18 2 chr2 183115178 183116281 -67571573 - L1M1 LINE L1 -5801 1764 580 13763 30 1 1 chr2 183116381 183118138 -67569716 + L1P LINE L1 2037 3793 -2353 1867 55 4 0 chr2 183118238 183118474 -67569380 + L1PA3 LINE L1 5916 6152 -3 181 244 98 0 chr2 183118486 183118500 -67569354 + MIR SINE MIR 137 148 -114 390 42 0 0 chr2 183118500 183118548 -67569306 + (ATG)n Simple_repeat Simple_repeat 2 49 0 181 244 98 0 chr2 183118548 183118615 -67569239 + MIR SINE MIR 148 226 -36 32 0 0 0 chr2 183119297 183119329 -67568525 + AT_rich Low_complexity Low_complexity 1 32 0 3551 226 85 9 chr2 183119329 183120379 -67567475 + L1MC4 LINE L1 6771 7900 -142 216 220 0 68 chr2 183120388 183120447 -67567407 + polypurine Low_complexity Low_complexity 3 57 0 549 247 156 0 chr2 183120599 183120785 -67567069 + MER102a DNA MER1_type 115 329 -1 865 181 0 0 chr2 183120873 183121006 -67566848 - FLAM_C SINE Alu -10 133 1 2547 16 16 10 chr2 183122012 183122321 -67565533 + AluYb8 SINE Alu 1 311 -7 13205 20 0 0 chr2 183122421 183124299 -67563555 + L1P1 LINE L1 3769 5646 -509 25 0 0 0 chr2 183125578 183125603 -67562251 + AT_rich Low_complexity Low_complexity 1 25 0 1396 237 58 26 chr2 183125715 183126217 -67561637 - L1ME3A LINE L1 -204 5966 5449 188 268 107 0 chr2 183126217 183126273 -67561581 - MIR SINE MIR -74 188 127 290 311 113 5 chr2 183126403 183126520 -67561334 + MIR SINE MIR 25 160 -100 207 100 0 0 chr2 183126520 183126550 -67561304 + (TAA)n Simple_repeat Simple_repeat 3 32 0 290 311 113 5 chr2 183126550 183126591 -67561263 + MIR SINE MIR 160 195 -65 37574 62 31 2 chr2 183126868 183132848 -67555006 + L1PA6 LINE L1 3 6153 -1 2301 108 3 3 chr2 183132861 183133168 -67554686 + AluSg SINE Alu 1 307 -3 5956 223 58 47 chr2 183133909 183134002 -67553852 + L1M4 LINE L1 2 92 -6552 2857 6 0 6 chr2 183134002 183134317 -67553537 - AluYb8 SINE Alu -5 313 1 5956 223 58 47 chr2 183134317 183136899 -67550955 + L1M4 LINE L1 92 2733 -3911 4227 85 15 5 chr2 183136899 183137509 -67550345 - L1MA1 LINE L1 -4 6298 5683 5956 223 58 47 chr2 183137509 183137767 -67550087 + L1M4 LINE L1 2733 2987 -3657 1607 106 144 0 chr2 183137765 183138049 -67549805 - L1P4 LINE L1 -588 5580 5256 * 7238 229 51 16 chr2 183138058 183139579 -67548275 + L1M4 LINE L1 2988 4618 -2026 2217 123 36 25 chr2 183139579 183139937 -67547917 + THE1B LTR MaLR 1 362 -2 7238 229 51 16 chr2 183139937 183140721 -67547133 + L1M4 LINE L1 4618 5373 -1271 1485 122 19 11 chr2 183140734 183141005 -67546849 + L1MB7 LINE L1 5660 5932 -252 2112 141 0 16 chr2 183141172 183141484 -67546370 + AluSq SINE Alu 1 307 -6 464 286 43 0 chr2 183142029 183142169 -67545685 + MIR SINE MIR 80 225 -37 225 323 73 62 chr2 183143929 183144025 -67543829 + MIR SINE MIR 22 118 -144 342 245 109 59 chr2 183144079 183144429 -67543425 - MLT1J LTR MaLR -44 467 60 553 176 0 0 chr2 183145898 183145989 -67541865 + MER5A DNA MER1_type 1 91 -98 299 237 76 13 chr2 183145990 183146127 -67541727 - MLT2B1 LTR ERVL -109 392 240 348 182 0 0 chr2 183146155 183146210 -67541644 + MER5A DNA MER1_type 123 177 -12 387 331 19 12 chr2 183146214 183146374 -67541480 + MIR SINE MIR 94 254 -8 304 293 37 12 chr2 183147977 183148059 -67539795 - L2 LINE L2 -86 3186 3103 305 262 84 9 chr2 183148400 183148507 -67539347 + MLT1L LTR MaLR 266 380 -235 210 312 16 95 chr2 183149022 183149211 -67538643 - MER5B DNA MER1_type 0 178 5 3969 174 74 56 chr2 183149618 183150989 -67536865 - L1PA16 LINE L1 -9 6157 4797 1500 178 3 20 chr2 183150984 183151326 -67536528 + L1PA16 LINE L1 4444 4779 -1367 * 490 107 13 0 chr2 183152024 183152099 -67535755 + MADE1 DNA Mariner 5 80 0 211 154 51 0 chr2 183152719 183152758 -67535096 + L3b LINE CR1 1538 1578 -5 1181 208 112 16 chr2 183153369 183153682 -67534172 - MER2 DNA MER2_type -1 344 2 282 73 0 0 chr2 183154297 183154338 -67533516 + (CAA)n Simple_repeat Simple_repeat 2 42 0 227 324 176 19 chr2 183154553 183154661 -67533193 + L2 LINE L2 3146 3270 -2 21 0 0 0 chr2 183154888 183154909 -67532945 + AT_rich Low_complexity Low_complexity 1 21 0 413 289 144 20 chr2 183154931 183155132 -67532722 - MIR SINE MIR -32 230 5 210 289 0 0 chr2 183155188 183155240 -67532614 - L2 LINE L2 0 3272 3221 2131 100 13 27 chr2 183155261 183155562 -67532292 + AluSx SINE Alu 1 297 -15 866 190 12 6 chr2 183155894 183156057 -67531797 + MER5A DNA MER1_type 1 164 -25 363 279 41 61 chr2 183155929 183156076 -67531778 - MER5A DNA MER1_type -23 166 23 * 286 184 99 90 chr2 183157185 183157408 -67530446 + MER113 DNA MER1_type? 3 227 -294 971 229 6 0 chr2 183157525 183157708 -67530146 + MER5A DNA MER1_type 6 189 0 2041 124 10 3 chr2 183157894 183158184 -67529670 + AluSq SINE Alu 1 292 -21 546 242 28 88 chr2 183158682 183158801 -67529053 - MIR3 SINE MIR -6 202 95 1961 138 0 21 chr2 183158801 183159113 -67528741 + AluJb SINE Alu 1 306 0 546 242 28 88 chr2 183159113 183159174 -67528680 - MIR3 SINE MIR -113 95 32 217 252 281 0 chr2 183160065 183160178 -67527676 + MIR SINE MIR 3 147 -61 1449 272 85 32 chr2 183160232 183160787 -67527067 + MLT1E LTR MaLR 1 584 -9 207 311 0 0 chr2 183160801 183160862 -67526992 + MIR SINE MIR 202 262 0 836 270 18 7 chr2 183161358 183161632 -67526222 + L1ME4a LINE L1 5641 5917 -204 7153 140 6 2 chr2 183162073 183163284 -67524570 + L1PA11 LINE L1 3951 5166 -980 2634 98 0 3 chr2 183163298 183163665 -67524189 - L1PB1 LINE L1 -3 6148 5783 227 149 0 21 chr2 183163670 183163717 -67524137 + (TA)n Simple_repeat Simple_repeat 1 46 0 3367 104 14 32 chr2 183163732 183164360 -67523494 - L1PB1 LINE L1 -369 5782 5162 5961 90 38 11 chr2 183164361 183164506 -67523348 + L1PA11 LINE L1 5151 5291 -883 243 0 0 0 chr2 183164506 183164533 -67523321 + (CA)n Simple_repeat Simple_repeat 2 28 0 5961 90 38 11 chr2 183164533 183165376 -67522478 + L1PA11 LINE L1 5291 6164 -10 496 270 66 20 chr2 183165836 183165988 -67521866 - MER5A DNA MER1_type -24 165 7 314 213 102 0 chr2 183166264 183166372 -67521482 + L1ME4a LINE L1 6001 6119 -2 405 299 102 44 chr2 183166515 183166789 -67521065 + L3b LINE CR1 1175 1464 -119 368 346 59 70 chr2 183167474 183167903 -67519951 + L2 LINE L2 2349 2781 -491 1142 162 14 14 chr2 183167903 183168125 -67519729 + L1MB8 LINE L1 5947 6168 -10 368 346 59 70 chr2 183168125 183168608 -67519246 + L2 LINE L2 2781 3253 -19 183 42 0 0 chr2 183168612 183168636 -67519218 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 192 324 141 27 chr2 183168729 183168914 -67518940 + L2 LINE L2 1791 1996 -1318 1130 153 0 36 chr2 183168922 183169118 -67518736 + MER5A DNA MER1_type 1 189 0 222 150 0 0 chr2 183169732 183169772 -67518082 + (T)n Simple_repeat Simple_repeat 1 40 0 1330 64 0 0 chr2 183169784 183169941 -67517913 - AluY SINE Alu -74 237 81 512 346 128 14 chr2 183170056 183170423 -67517431 + L2 LINE L2 1966 2374 -940 326 141 0 16 chr2 183170799 183170863 -67516991 + (CCA)n Simple_repeat Simple_repeat 3 65 0 596 292 115 10 chr2 183170882 183171091 -67516763 - MIR SINE MIR -6 256 26 320 301 195 0 chr2 183171066 183171179 -67516675 + L2 LINE L2 3134 3268 -4 * 1656 173 0 39 chr2 183171362 183171674 -67516180 - AluJo SINE Alu -12 300 1 390 200 32 11 chr2 183172052 183172147 -67515707 - MLT1J1 LTR MaLR -5 441 345 281 311 91 0 chr2 183172242 183172374 -67515480 - MLT1J LTR MaLR -265 246 103 303 148 2 16 chr2 183172849 183172923 -67514931 - AluS SINE Alu -16 285 225 334 24 0 0 chr2 183173023 183173065 -67514789 - L1P LINE L1 -3928 2218 2177 7245 51 0 0 chr2 183173072 183174145 -67513709 - L1PA5 LINE L1 -8 6146 5073 673 280 68 21 chr2 183174170 183174406 -67513448 - MIR SINE MIR -11 251 5 2154 184 11 5 chr2 183174498 183174944 -67512910 + L1MB4 LINE L1 5732 6180 0 1844 151 26 49 chr2 183175069 183175499 -67512355 + L1M1 LINE L1 13 432 -7133 2027 124 0 0 chr2 183175608 183176075 -67511779 + L1M1 LINE L1 1756 2273 -5292 348 281 0 0 chr2 183176124 183176206 -67511648 - L1 LINE L1 -3462 2684 2603 11284 173 18 20 chr2 183176262 183181786 -67506068 + L1MA2 LINE L1 2275 7723 0 6516 98 1 0 chr2 183182175 183183888 -67503966 + L1PA8 LINE L1 4448 6172 0 186 43 0 0 chr2 183184023 183184046 -67503808 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 402 163 31 31 chr2 183184342 183184471 -67503383 + CT-rich Low_complexity Low_complexity 5 133 0 276 304 157 0 chr2 183184769 183184871 -67502983 + L2 LINE L2 3152 3269 -3 2179 159 68 12 chr2 183184949 183185358 -67502496 + MSTB1 LTR MaLR 1 432 0 21 57 0 0 chr2 183185618 183185653 -67502201 + AT_rich Low_complexity Low_complexity 1 35 0 2893 32 5 3 chr2 183187221 183187591 -67500263 + L1HS LINE L1 5785 6155 0 610 289 61 4 chr2 183187910 183188173 -67499681 - MER46C DNA MER2_type -43 295 18 571 328 21 0 chr2 183188952 183189138 -67498716 + MIR SINE MIR 2 191 -71 24 32 0 0 chr2 183189410 183189441 -67498413 + AT_rich Low_complexity Low_complexity 1 31 0 704 201 61 0 chr2 183190262 183190426 -67497428 + MER5B DNA MER1_type 4 177 -1 286 304 29 10 chr2 183190732 183190834 -67497020 - L2 LINE L2 -31 3282 3179 286 296 96 80 chr2 183192146 183192623 -67495231 + LTR33A LTR ERVL 7 491 -32 1990 152 56 19 chr2 183192716 183193092 -67494762 + MLT1B LTR MaLR 1 390 0 339 250 125 52 chr2 183193098 183193234 -67494620 + MIR SINE MIR 78 223 -39 2188 107 7 0 chr2 183193249 183193538 -67494316 - AluSq SINE Alu -22 291 1 2232 119 0 0 chr2 183193744 183194055 -67493799 - AluSx SINE Alu -1 311 1 332 341 29 22 chr2 183196198 183196336 -67491518 - MIR SINE MIR -34 228 90 585 304 23 106 chr2 183196394 183196919 -67490935 + L2 LINE L2 2739 3219 -53 2165 136 27 24 chr2 183197137 183197511 -67490343 + THE1C LTR MaLR 1 375 0 32 0 0 0 chr2 183197516 183197548 -67490306 + AT_rich Low_complexity Low_complexity 1 32 0 319 300 95 52 chr2 183197726 183197936 -67489918 + L3 LINE CR1 1163 1381 -196 1421 202 55 0 chr2 183198097 183198369 -67489485 + AluJo SINE Alu 6 292 -20 403 313 75 22 chr2 183198655 183198882 -67488972 - L1MC4a LINE L1 -1883 5925 5687 22 0 0 73 chr2 183199023 183199064 -67488790 + AT_rich Low_complexity Low_complexity 1 38 0 680 289 105 40 chr2 183201203 183201583 -67486271 + MLT1I LTR MaLR 5 409 0 234 158 0 0 chr2 183202539 183202577 -67485277 + L2 LINE L2 3017 3054 -218 199 301 14 41 chr2 183202713 183202786 -67485068 + L2 LINE L2 3186 3256 -16 968 205 66 0 chr2 183203016 183203260 -67484594 - MER46C DNA MER2_type 0 338 79 2705 97 14 0 chr2 183203304 183203674 -67484180 + THE1C LTR MaLR 1 375 0 186 103 0 0 chr2 183204103 183204132 -67483722 + (CA)n Simple_repeat Simple_repeat 1 29 0 231 36 0 0 chr2 183206054 183206082 -67481772 + (TC)n Simple_repeat Simple_repeat 1 28 0 * 264 59 0 0 chr2 183206081 183206115 -67481739 + (CA)n Simple_repeat Simple_repeat 1 34 0 214 139 28 0 chr2 183207301 183207337 -67480517 - MIR SINE MIR -110 152 116 356 276 16 19 chr2 183207500 183207608 -67480246 - MIR SINE MIR -63 145 36 200 214 18 0 chr2 183209337 183209393 -67478461 + CT-rich Low_complexity Low_complexity 2 58 0 228 226 0 0 chr2 183209484 183209546 -67478308 + (CA)n Simple_repeat Simple_repeat 1 62 0 251 230 283 18 chr2 183209584 183209697 -67478157 - MIR SINE MIR 0 262 120 26 30 0 0 chr2 183210452 183210485 -67477369 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr2 183212237 183212259 -67475595 + AT_rich Low_complexity Low_complexity 1 22 0 445 286 16 73 chr2 183214466 183214781 -67473073 + L1ME3A LINE L1 5653 5949 -221 30 59 0 0 chr2 183215211 183215262 -67472592 + AT_rich Low_complexity Low_complexity 1 51 0 242 261 9 108 chr2 183215554 183215665 -67472189 + L2 LINE L2 3209 3308 -5 493 225 40 54 chr2 183215985 183216207 -67471647 + L1MC5 LINE L1 7696 7914 -47 186 327 0 0 chr2 183220778 183220830 -67467024 + L2 LINE L2 2690 2741 -573 967 188 0 0 chr2 183221021 183221175 -67466679 - FRAM SINE Alu -12 154 1 380 290 122 8 chr2 183221196 183221327 -67466527 + L2 LINE L2 3127 3272 0 261 83 0 0 chr2 183221339 183221375 -67466479 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 258 105 0 0 chr2 183221488 183221526 -67466328 + (TAA)n Simple_repeat Simple_repeat 2 39 0 528 260 183 27 chr2 183221526 183221745 -67466109 - MIR SINE MIR -8 254 2 1795 111 77 0 chr2 183221860 183222121 -67465733 + AluSg SINE Alu 1 281 -29 2039 109 0 11 chr2 183222285 183222560 -67465294 + AluSg SINE Alu 18 289 -21 236 203 16 0 chr2 183222584 183222648 -67465206 + L1MC4 LINE L1 6653 6717 -1325 297 257 55 64 chr2 183222776 183222885 -67464969 - MIR SINE MIR -65 197 90 30 0 0 0 chr2 183223131 183223161 -67464693 + AT_rich Low_complexity Low_complexity 1 30 0 423 0 0 0 chr2 183224202 183224249 -67463605 + (TG)n Simple_repeat Simple_repeat 2 48 0 824 118 13 7 chr2 183224718 183224870 -67462984 - L1MA4A LINE L1 0 6303 6151 494 259 138 11 chr2 183226959 183227148 -67460706 + MIR SINE MIR 50 262 0 251 195 134 37 chr2 183227565 183227647 -67460207 + MIR SINE MIR 42 131 -77 181 185 0 111 chr2 183227772 183227826 -67460028 - L2 LINE L2 -4 3268 3221 2383 84 17 3 chr2 183228145 183228490 -67459364 - THE1A LTR MaLR -5 350 1 11193 99 3 0 chr2 183228495 183230064 -67457790 - THE1A-int LTR MaLR -6 1574 1 1979 105 10 7 chr2 183230064 183230358 -67457496 - THE1A LTR MaLR 0 355 61 412 215 59 15 chr2 183230488 183230623 -67457231 + AluY SINE Alu 160 300 -11 238 286 27 18 chr2 183231745 183231867 -67455987 - MIR SINE MIR -62 146 75 249 139 0 0 chr2 183232539 183232582 -67455272 + (CA)n Simple_repeat Simple_repeat 1 43 0 2167 100 7 0 chr2 183235039 183235318 -67452536 + AluSc SINE Alu 5 285 -24 284 83 21 0 chr2 183235334 183235382 -67452472 + (TA)n Simple_repeat Simple_repeat 2 50 0 509 63 0 13 chr2 183235385 183235464 -67452390 + (TAGA)n Simple_repeat Simple_repeat 1 78 0 2149 133 0 0 chr2 183235471 183235779 -67452075 + AluSx SINE Alu 5 312 0 228 222 28 14 chr2 183236174 183236246 -67451608 + GA-rich Low_complexity Low_complexity 3 75 0 1128 118 18 0 chr2 183237643 183237812 -67450042 - L1PB4 LINE L1 -1 6155 5984 2929 215 60 27 chr2 183240187 183241011 -67446843 - L1ME1 LINE L1 -4 6231 5381 2561 221 32 111 chr2 183241003 183241526 -67446328 - L1ME1 LINE L1 -1280 4935 4373 * 2327 102 0 0 chr2 183241526 183241829 -67446025 - AluSq SINE Alu -10 303 1 2561 221 32 111 chr2 183241829 183242617 -67445237 - L1ME1 LINE L1 -1842 4373 3727 41 21 0 0 chr2 183242619 183242667 -67445187 + AT_rich Low_complexity Low_complexity 1 48 0 506 157 0 0 chr2 183242767 183242856 -67444998 - L1MB8 LINE L1 0 6178 6090 4318 260 70 36 chr2 183242864 183243024 -67444830 - L1ME1 LINE L1 -4426 1970 1817 2135 141 0 0 chr2 183243024 183243322 -67444532 - AluSx SINE Alu -14 298 1 4318 260 70 36 chr2 183243322 183243885 -67443969 - L1ME1 LINE L1 -4579 1817 1275 2136 133 10 0 chr2 183243885 183244187 -67443667 - AluSq SINE Alu -8 305 1 4318 260 70 36 chr2 183244187 183244260 -67443594 - L1ME1 LINE L1 -5121 1275 1206 2188 125 0 3 chr2 183244260 183244564 -67443290 - AluSc SINE Alu -6 303 1 4318 260 70 36 chr2 183244564 183245619 -67442235 - L1ME1 LINE L1 -5190 1206 53 243 282 35 12 chr2 183245729 183245814 -67442040 + L2 LINE L2 3161 3247 -25 * 376 345 48 82 chr2 183245780 183246180 -67441674 - L2 LINE L2 -82 3190 2805 726 253 24 0 chr2 183246371 183246541 -67441313 - MER96 DNA MER1_type 0 175 2 330 229 36 0 chr2 183246982 183247065 -67440789 + MER5A DNA MER1_type 9 94 -95 882 248 203 14 chr2 183247193 183247617 -67440237 + MLT1D LTR MaLR 1 504 -1 325 315 23 39 chr2 183247697 183247827 -67440027 - MIR SINE MIR -65 143 16 1487 117 0 0 chr2 183248120 183248341 -67439513 - AluSc SINE Alu 0 303 83 336 261 17 35 chr2 183248566 183248681 -67439173 - L2 LINE L2 0 3313 3201 1789 35 0 0 chr2 183250061 183250263 -67437591 - AluY SINE Alu -11 300 99 509 301 87 18 chr2 183250419 183250648 -67437206 + MIR SINE MIR 7 251 -11 459 182 39 182 chr2 183250812 183251015 -67436839 - MER5B DNA MER1_type -4 174 1 439 274 0 10 chr2 183251072 183251174 -67436680 - L2 LINE L2 -830 2484 2384 187 391 55 18 chr2 183251212 183251322 -67436532 - L2 LINE L2 -58 3214 3101 2063 134 49 0 chr2 183252330 183252658 -67435196 - MER2 DNA MER2_type 0 344 1 361 245 13 40 chr2 183252699 183252850 -67435004 + (TA)n Simple_repeat Simple_repeat 2 148 0 23 0 0 0 chr2 183253334 183253357 -67434497 + AT_rich Low_complexity Low_complexity 1 23 0 3028 147 8 4 chr2 183253885 183254408 -67433446 + L1MA4 LINE L1 5775 6299 -1 1396 232 8 0 chr2 183254594 183254848 -67433006 + AluJo SINE Alu 1 256 -56 388 295 32 19 chr2 183255937 183256093 -67431761 - MER117 DNA MER1_type -29 168 11 1157 273 100 15 chr2 183256990 183257401 -67430453 + MLT1J2 LTR MaLR 5 450 0 545 285 0 0 chr2 183257598 183257721 -67430133 - MIR SINE MIR -133 129 7 455 314 29 7 chr2 183258179 183258319 -67429535 + MIR SINE MIR 2 144 -118 1491 29 5 5 chr2 183258322 183258527 -67429327 + L1P2 LINE L1 5269 5473 -682 345 71 18 0 chr2 183258667 183258723 -67429131 + L1PA6 LINE L1 6098 6154 0 289 73 0 0 chr2 183258727 183258768 -67429086 - MADE1 DNA Mariner -39 41 1 459 196 159 9 chr2 183258768 183258875 -67428979 - MIR SINE MIR -111 151 29 1951 130 3 60 chr2 183258879 183259195 -67428659 - AluSq SINE Alu -15 298 1 24 0 0 0 chr2 183260553 183260577 -67427277 + AT_rich Low_complexity Low_complexity 1 24 0 184 281 16 16 chr2 183260634 183260698 -67427156 - L2 LINE L2 -217 3055 2992 1290 131 0 110 chr2 183260715 183260803 -67427051 + L1MA2 LINE L1 6044 6140 -164 1633 132 64 54 chr2 183260803 183261099 -67426755 - AluJb SINE Alu -13 299 1 1290 131 0 110 chr2 183261099 183261301 -67426553 + L1MA2 LINE L1 6140 6302 -2 4482 90 3 2 chr2 183261484 183262061 -67425793 - L1PA11 LINE L1 -2 6172 5595 2327 75 10 7 chr2 183262109 183262404 -67425450 + AluY SINE Alu 1 296 -15 185 303 181 32 chr2 183262862 183263017 -67424837 + MIR3 SINE MIR 20 197 -11 634 53 0 0 chr2 183263066 183263142 -67424712 + L1PB2 LINE L1 5814 5889 -262 245 54 0 26 chr2 183263140 183263173 -67424681 + L1PB2 LINE L1 5855 5885 -271 * 2093 104 24 0 chr2 183263173 183263461 -67424393 + L1PB2 LINE L1 5855 6149 -2 245 54 0 26 chr2 183263461 183263475 -67424379 + L1PB2 LINE L1 5885 5898 -258 1979 129 0 30 chr2 183263931 183264226 -67423628 - AluSx SINE Alu -26 286 1 772 134 123 78 chr2 183265338 183265517 -67422337 - MER53 DNA DNA -1 188 2 1636 190 8 95 chr2 183265801 183266201 -67421653 - MLT1A1 LTR MaLR 0 365 1 1376 139 163 16 chr2 183266274 183266532 -67421322 + AluJb SINE Alu 2 297 -15 252 0 0 0 chr2 183266532 183266560 -67421294 + (TA)n Simple_repeat Simple_repeat 2 29 0 851 168 0 0 chr2 183266626 183266757 -67421097 - FRAM SINE Alu -34 142 12 2818 143 38 7 chr2 183266840 183267287 -67420567 - LOR1b LTR ERV1 0 461 1 338 329 45 7 chr2 183267837 183267992 -67419862 - L3 LINE CR1 -16 1561 1401 240 35 0 0 chr2 183268837 183268866 -67418988 + (CA)n Simple_repeat Simple_repeat 2 30 0 433 47 31 0 chr2 183268897 183268961 -67418893 + (TAGA)n Simple_repeat Simple_repeat 2 67 0 473 310 162 5 chr2 183270076 183270273 -67417581 - MIR SINE MIR 0 262 35 183 328 53 46 chr2 183270848 183270979 -67416875 - MIR3 SINE MIR -6 202 71 1665 156 74 0 chr2 183271189 183271472 -67416382 + AluJo SINE Alu 1 304 -8 650 271 133 10 chr2 183271924 183272127 -67415727 - MIR SINE MIR 0 262 35 1491 216 49 12 chr2 183272312 183272640 -67415214 - MER58B DNA MER1_type -1 340 1 314 235 76 84 chr2 183272787 183272906 -67414948 + MIR SINE MIR 20 137 -71 832 219 96 0 chr2 183272978 183273165 -67414689 - MIR SINE MIR -56 206 2 536 291 41 50 chr2 183273245 183273317 -67414537 - MIR SINE MIR -12 250 179 2465 63 3 3 chr2 183273317 183273616 -67414238 - AluY SINE Alu -12 299 1 536 291 41 50 chr2 183273616 183273763 -67414091 - MIR SINE MIR -83 179 33 254 256 46 24 chr2 183274630 183274737 -67413117 + MIR SINE MIR 52 141 -67 1963 174 51 18 chr2 183279431 183279821 -67408033 + MLT1C LTR MaLR 65 467 0 292 207 0 160 chr2 183279918 183279994 -67407860 - L2 LINE L2 0 3313 3271 2382 78 0 10 chr2 183279994 183280301 -67407553 + AluY SINE Alu 1 304 -7 292 207 0 160 chr2 183280301 183280374 -67407480 - L2 LINE L2 -42 3271 3188 669 268 74 25 chr2 183280504 183280747 -67407107 + MIR SINE MIR 8 262 0 630 180 161 25 chr2 183280884 183281045 -67406809 + MIR SINE MIR 66 248 -14 432 248 105 92 chr2 183281784 183282200 -67405654 - MLT1H LTR MaLR -71 478 12 335 296 171 45 chr2 183282564 183282851 -67405003 - L2 LINE L2 -9 3263 2941 952 313 125 14 chr2 183333657 183334136 -67353718 - L3 LINE CR1 -132 1445 908 2188 99 6 39 chr2 183334136 183334470 -67353384 - AluSg SINE Alu 0 310 1 952 313 125 14 chr2 183334470 183334485 -67353369 - L3 LINE CR1 -669 908 896 576 261 149 54 chr2 183335213 183335603 -67352251 + MLT1J2 LTR MaLR 5 431 -19 250 358 6 34 chr2 183335620 183335799 -67352055 + CT-rich Low_complexity Low_complexity 2 175 0 198 286 0 0 chr2 183336243 183336313 -67351541 + GA-rich Low_complexity Low_complexity 3 72 0 388 322 21 21 chr2 183336765 183336908 -67350946 - MER5B DNA MER1_type -24 154 12 525 297 132 0 chr2 183336977 183337196 -67350658 + MIR SINE MIR 2 249 -13 645 14 0 0 chr2 183337199 183337273 -67350581 + (TG)n Simple_repeat Simple_repeat 1 74 0 186 43 0 0 chr2 183337275 183337298 -67350556 + (GA)n Simple_repeat Simple_repeat 2 24 0 389 289 176 1 chr2 183337799 183337978 -67349876 + MIR SINE MIR 31 240 -22 249 216 123 57 chr2 183338451 183338594 -67349260 + MIR SINE MIR 54 200 -61 222 204 0 23 chr2 183338591 183338635 -67349219 - L2 LINE L2 -13 3300 3258 * 472 252 144 0 chr2 183338601 183338740 -67349114 - MIR SINE MIR -16 246 88 1841 151 11 0 chr2 183338781 183339084 -67348770 + AluJb SINE Alu 1 306 0 402 257 337 0 chr2 183339991 183340178 -67347676 + MIR SINE MIR 13 262 0 2607 52 0 0 chr2 183340212 183340538 -67347316 - LTR17 LTR ERV1 -454 326 1 5884 63 17 0 chr2 183340542 183341309 -67346545 - HERV17 LTR ERV1 -4 8622 7843 2280 47 40 0 chr2 183341300 183341599 -67346255 - HERV17 LTR ERV1 -622 8004 7694 * 2357 80 10 3 chr2 183342353 183342654 -67345200 - AluSc SINE Alu -6 303 1 353 266 67 58 chr2 183343362 183343730 -67344124 + L1ME LINE L1 5502 5855 -315 1633 166 35 14 chr2 183343735 183344025 -67343829 + AluJo SINE Alu 1 296 -16 2572 51 0 3 chr2 183344031 183344343 -67343511 + AluY SINE Alu 1 311 0 2394 78 3 10 chr2 183345405 183345714 -67342140 - AluY SINE Alu -4 307 1 180 274 81 16 chr2 183346558 183346620 -67341234 - L3b LINE CR1 -117 1466 1401 858 170 35 0 chr2 183347327 183347527 -67340327 + L1MA4 LINE L1 6094 6300 0 337 261 128 0 chr2 183348230 183348418 -67339436 + L1ME4a LINE L1 5878 6089 -32 218 194 0 0 chr2 183348654 183348690 -67339164 + (CA)n Simple_repeat Simple_repeat 1 36 0 353 329 39 7 chr2 183348711 183348866 -67338988 + MIR SINE MIR 47 206 -56 222 37 0 0 chr2 183349439 183349466 -67338388 + (TG)n Simple_repeat Simple_repeat 2 28 0 2059 167 51 0 chr2 183349470 183349842 -67338012 - MER47B DNA MER2_type 0 418 28 239 284 0 14 chr2 183350543 183350617 -67337237 - LTR33A LTR ERVL -7 516 444 306 309 62 0 chr2 183350939 183351036 -67336818 + L2 LINE L2 3193 3295 -18 5528 85 22 0 chr2 183351217 183352019 -67335835 + L1PA13 LINE L1 5325 6144 -19 382 285 33 34 chr2 183353086 183353386 -67334468 + MLT1I LTR MaLR 68 409 0 27 0 0 0 chr2 183353845 183353872 -67333982 + AT_rich Low_complexity Low_complexity 1 27 0 1104 279 45 15 chr2 183353904 183354241 -67333613 - L3 LINE CR1 -1 1576 1230 2334 92 0 13 chr2 183354663 183354977 -67332877 - AluSx SINE Alu -2 310 1 579 222 66 75 chr2 183355661 183355873 -67331981 + MIR SINE MIR 53 262 0 249 322 167 0 chr2 183357268 183357358 -67330496 + MIR SINE MIR 65 169 -93 598 75 21 0 chr2 183357772 183357865 -67329989 + (TAGA)n Simple_repeat Simple_repeat 3 97 0 2181 113 3 3 chr2 183358458 183358751 -67329103 - AluSq SINE Alu -20 293 1 608 274 85 14 chr2 183358775 183358987 -67328867 + MIR SINE MIR 36 262 0 267 287 52 23 chr2 183359474 183359648 -67328206 - L1ME4a LINE L1 -213 5908 5730 2382 92 7 0 chr2 183360142 183360447 -67327407 - AluSp SINE Alu -6 307 1 802 230 37 26 chr2 183360794 183360985 -67326869 + MIR SINE MIR 4 196 -66 288 0 0 0 chr2 183361116 183361148 -67326706 + (TG)n Simple_repeat Simple_repeat 1 32 0 264 77 0 0 chr2 183362326 183362365 -67325489 + (TG)n Simple_repeat Simple_repeat 2 40 0 2346 82 0 3 chr2 183362365 183362658 -67325196 - AluSc SINE Alu -17 292 1 298 279 49 66 chr2 183363459 183363581 -67324273 + MIR SINE MIR 26 145 -63 24 53 0 0 chr2 183365222 183365260 -67322594 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr2 183365787 183365809 -67322045 + (T)n Simple_repeat Simple_repeat 1 22 0 705 266 82 0 chr2 183367388 183367572 -67320282 - MIR SINE MIR -1 261 63 10964 113 25 16 chr2 183367626 183370067 -67317787 - L1PA10 LINE L1 -1 6167 3697 1958 141 47 0 chr2 183370067 183370365 -67317489 - AluSx SINE Alu 0 312 1 10964 113 25 16 chr2 183370365 183370432 -67317422 - L1PA10 LINE L1 -2471 3697 3632 409 213 21 11 chr2 183372032 183372126 -67315728 + MER21B LTR ERV1 9 103 -760 * 2602 240 36 23 chr2 183372123 183372873 -67314981 + MER21B LTR ERV1 53 812 -51 400 307 147 35 chr2 183375654 183376055 -67311799 - L2 LINE L2 -829 2485 2040 476 283 118 7 chr2 183376587 183376739 -67311115 - MIR SINE MIR -57 205 37 22 0 0 0 chr2 183377395 183377417 -67310437 + AT_rich Low_complexity Low_complexity 1 22 0 371 295 53 93 chr2 183378086 183378462 -67309392 + L1MEd LINE L1 670 1030 -5089 2235 122 0 0 chr2 183378959 183379262 -67308592 + AluSc SINE Alu 1 303 -6 383 301 15 41 chr2 183379567 183379763 -67308091 + L1MC4a LINE L1 6673 6863 -945 228 276 92 41 chr2 183381616 183381714 -67306140 + MIR SINE MIR 41 143 -119 800 259 116 5 chr2 183381862 183382086 -67305768 - MIR SINE MIR 0 262 14 2253 102 3 0 chr2 183384582 183384876 -67302978 - AluSx SINE Alu -17 295 1 1490 199 59 68 chr2 183385209 183385730 -67302124 + MER39 LTR ERV1 1 707 0 2300 70 21 0 chr2 183385773 183386060 -67301794 - AluY SINE Alu -18 293 1 426 246 225 0 chr2 183386267 183386409 -67301445 - MIR SINE MIR -21 241 68 341 302 217 21 chr2 183386439 183386628 -67301226 - MIR SINE MIR -9 253 28 869 141 0 15 chr2 183386691 183386826 -67301028 - FLAM_C SINE Alu 0 133 1 235 268 0 28 chr2 183389404 183389475 -67298379 + MIR SINE MIR 178 246 -16 2147 152 18 33 chr2 183389546 183389940 -67297914 - MLT1B LTR MaLR -2 388 1 2095 117 0 0 chr2 183391906 183392207 -67295647 - AluSq SINE Alu 0 304 4 291 339 73 9 chr2 183393728 183393837 -67294017 - MIR SINE MIR -66 142 27 269 224 158 0 chr2 183394674 183394750 -67293104 - MIR3 SINE MIR -1 207 120 221 255 0 0 chr2 183395395 183395442 -67292412 - L2 LINE L2 -4 3309 3263 27 49 0 0 chr2 183397373 183397414 -67290440 + AT_rich Low_complexity Low_complexity 1 41 0 209 180 20 0 chr2 183397647 183397697 -67290157 + GA-rich Low_complexity Low_complexity 2 52 0 571 231 22 8 chr2 183397776 183397910 -67289944 + MER63 DNA MER1_type 2 763 -73 208 246 33 16 chr2 183398030 183398091 -67289763 - MIR SINE MIR -68 140 79 21 0 0 0 chr2 183398392 183398413 -67289441 + AT_rich Low_complexity Low_complexity 1 21 0 235 318 24 63 chr2 183398853 183398979 -67288875 + MIR SINE MIR 57 177 -85 2722 10 0 0 chr2 183399180 183399479 -67288375 + AluY SINE Alu 1 299 -12 297 284 135 14 chr2 183400134 183400282 -67287572 - MIR SINE MIR 0 262 97 723 248 134 15 chr2 183400533 183400735 -67287119 + MIR SINE MIR 31 256 -6 31 0 0 0 chr2 183400945 183400976 -67286878 + AT_rich Low_complexity Low_complexity 1 31 0 180 77 0 0 chr2 183403044 183403070 -67284784 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 231 238 151 95 chr2 183404077 183404180 -67283674 - MIR SINE MIR -117 145 32 1550 80 0 5 chr2 183404180 183404380 -67283474 - AluY SINE Alu -13 298 100 231 238 151 95 chr2 183404380 183404402 -67283452 - MIR SINE MIR -230 32 13 562 252 39 39 chr2 183405448 183405682 -67282172 + L1MC4 LINE L1 5749 5982 -1826 775 127 0 0 chr2 183405703 183405821 -67282033 + L1MA1 LINE L1 6185 6302 0 29 0 0 0 chr2 183405821 183405850 -67282004 + AT_rich Low_complexity Low_complexity 1 29 0 200 244 0 0 chr2 183405924 183405965 -67281889 + (TA)n Simple_repeat Simple_repeat 1 41 0 263 213 0 43 chr2 183405966 183406060 -67281794 - L1MC4 LINE L1 -1339 6703 6614 257 135 19 0 chr2 183406060 183406112 -67281742 + (TA)n Simple_repeat Simple_repeat 1 53 0 387 278 27 32 chr2 183406184 183406371 -67281483 + L1MC4a LINE L1 5749 5934 -1874 617 273 50 6 chr2 183407142 183407330 -67280524 + MIR SINE MIR 16 214 -48 331 252 78 29 chr2 183407346 183407449 -67280405 - MER81 DNA DNA -1 113 6 182 326 160 49 chr2 183407659 183407803 -67280051 + MIR3 SINE MIR 36 195 -13 21 0 0 0 chr2 183408722 183408743 -67279111 + AT_rich Low_complexity Low_complexity 1 21 0 3110 145 111 84 chr2 183409050 183410373 -67277481 + pTR5 LTR ERV1 31 558 -156 314 296 17 0 chr2 183410421 183410536 -67277318 - L1MC4 LINE L1 -2008 5800 5684 2455 191 18 19 chr2 183410601 183411168 -67276686 - L1MB8 LINE L1 0 6178 5613 1283 187 6 39 chr2 183411346 183411511 -67276343 - MER33 DNA MER1_type -2265 320 170 2234 104 3 0 chr2 183411511 183411809 -67276045 - AluSq SINE Alu -14 299 1 1283 187 6 39 chr2 183411809 183411974 -67275880 - MER33 DNA MER1_type -2415 170 1 527 320 117 5 chr2 183413044 183413250 -67274604 + MIR SINE MIR 1 229 -33 319 372 0 16 chr2 183413534 183413663 -67274191 - L2 LINE L2 -1 3271 3145 293 268 37 12 chr2 183413746 183413828 -67274026 + L2 LINE L2 3185 3268 -4 1782 78 0 21 chr2 183413974 183414217 -67273637 + L1PA6 LINE L1 5902 6139 -15 25 83 0 0 chr2 183414488 183414548 -67273306 + AT_rich Low_complexity Low_complexity 1 60 0 2044 110 47 7 chr2 183415449 183415749 -67272105 + AluSq SINE Alu 1 312 -1 375 285 70 16 chr2 183415836 183416022 -67271832 - MIR SINE MIR -56 206 11 7394 122 75 6 chr2 183418641 183419859 -67267995 - HSMAR2 DNA Mariner 0 1302 1 205 298 60 86 chr2 183420461 183420612 -67267242 + MIR SINE MIR 2 148 -114 2424 110 31 3 chr2 183420633 183420987 -67266867 - THE1B LTR MaLR 0 364 1 184 324 135 0 chr2 183421086 183421197 -67266657 + MIR SINE MIR 137 262 0 693 272 239 16 chr2 183422650 183423222 -67264632 - L2 LINE L2 0 3313 2616 362 237 118 53 chr2 183423360 183423512 -67264342 + MIR SINE MIR 101 262 0 1966 160 0 0 chr2 183424944 183425251 -67262603 + AluJb SINE Alu 3 309 -3 228 138 15 123 chr2 183426165 183426203 -67261651 - L1MC1 LINE L1 -1 6332 6292 1895 99 149 19 chr2 183426203 183426525 -67261329 + THE1B LTR MaLR 1 364 0 11660 95 9 0 chr2 183426525 183428091 -67259763 + THE1B-int LTR MaLR 1 1580 0 2001 130 81 26 chr2 183428091 183428436 -67259418 + THE1B LTR MaLR 1 364 0 228 138 15 123 chr2 183428436 183428460 -67259394 - L1MC1 LINE L1 -38 6295 6275 * 4060 142 10 21 chr2 183428452 183429273 -67258581 + L1MC1 LINE L1 5513 6296 -37 599 243 105 28 chr2 183429309 183429540 -67258314 - MIR SINE MIR 0 262 7 2828 83 5 0 chr2 183430569 183430954 -67256900 - L1PA8 LINE L1 -1 6171 5785 577 251 18 80 chr2 183431094 183431286 -67256568 + MIR SINE MIR 31 207 -36 197 177 81 81 chr2 183432981 183433043 -67254811 - MIR SINE MIR -119 143 82 1122 228 0 13 chr2 183433236 183433460 -67254394 + MER58A DNA MER1_type 4 224 0 2247 118 0 0 chr2 183433512 183433818 -67254036 - AluSq SINE Alu -7 306 1 2440 65 0 0 chr2 183433936 183434229 -67253625 + AluY SINE Alu 19 311 0 246 312 16 24 chr2 183434463 183434591 -67253263 + MIR3 SINE MIR 72 200 -8 364 242 55 11 chr2 183435491 183435582 -67252272 + MIR3 SINE MIR 65 159 -49 584 281 126 24 chr2 183435942 183436296 -67251558 - MLT1J1 LTR MaLR -34 477 20 210 212 15 15 chr2 183436368 183436434 -67251420 + (TA)n Simple_repeat Simple_repeat 2 67 0 2289 58 24 3 chr2 183436844 183437139 -67250715 - AluY SINE Alu -10 301 1 425 155 0 0 chr2 183437211 183437282 -67250572 - MER3 DNA MER1_type -1 208 138 280 172 31 0 chr2 183437289 183437353 -67250501 - MER3 DNA MER1_type -45 164 99 620 172 0 0 chr2 183437404 183437503 -67250351 + FLAM_A SINE Alu 1 99 -43 207 0 0 0 chr2 183437512 183437535 -67250319 + (TC)n Simple_repeat Simple_repeat 2 24 0 2233 104 3 3 chr2 183437535 183437834 -67250020 - AluSq SINE Alu -14 299 1 584 160 130 0 chr2 183437834 183437934 -67249920 - MER3 DNA MER1_type -96 113 1 298 239 45 0 chr2 183437955 183438022 -67249832 - L1ME LINE L1 -486 5635 5566 627 289 124 69 chr2 183438023 183438442 -67249412 - LTR67 LTR ERVL -3 554 113 577 283 41 33 chr2 183438463 183438893 -67248961 - L1ME LINE L1 -753 5393 5191 * 1145 207 78 104 chr2 183438883 183439341 -67248513 - L1MC5 LINE L1 -30 7931 7495 2332 108 0 0 chr2 183439341 183439648 -67248206 - AluSg SINE Alu -1 309 3 1145 207 78 104 chr2 183439648 183439870 -67247984 - L1MC5 LINE L1 -466 7495 7269 691 184 7 22 chr2 183439870 183440006 -67247848 + AluJo SINE Alu 1 134 -178 750 157 12 52 chr2 183440071 183440243 -67247611 - L1MC5 LINE L1 -723 7238 7074 655 254 33 72 chr2 183440375 183440651 -67247203 + L1MC5 LINE L1 6695 6959 -1002 425 284 103 21 chr2 183440994 183441237 -67246617 + L1MDa LINE L1 1665 1927 -4613 2768 197 65 31 chr2 183441638 183442138 -67245716 + L1MB8 LINE L1 4782 5263 -921 318 86 17 0 chr2 183442138 183442196 -67245658 + L1MC2 LINE L1 6284 6342 -2 2768 197 65 31 chr2 183442196 183442802 -67245052 + L1MB8 LINE L1 5263 5949 -235 1700 160 7 4 chr2 183442806 183443075 -67244779 + AluJb SINE Alu 5 274 -38 403 168 21 11 chr2 183443075 183443170 -67244684 + GA-rich Low_complexity Low_complexity 3 98 0 853 78 22 39 chr2 183443179 183443358 -67244496 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 396 169 0 63 chr2 183443368 183443510 -67244344 + GA-rich Low_complexity Low_complexity 1 133 0 956 163 41 54 chr2 183443518 183443739 -67244115 + L1MB8 LINE L1 5961 6178 0 1581 120 0 0 chr2 183444225 183444442 -67243412 + AluSg/x SINE Alu 84 300 -12 343 301 36 134 chr2 183445066 183445372 -67242482 + L2 LINE L2 2953 3228 -44 1227 226 86 26 chr2 183445398 183445748 -67242106 + L1MC4a LINE L1 7438 7808 0 232 281 0 0 chr2 183445798 183445855 -67241999 + GA-rich Low_complexity Low_complexity 4 60 0 325 307 70 92 chr2 183446069 183446427 -67241427 - L2 LINE L2 -9 3263 2914 3075 183 23 24 chr2 183446484 183447050 -67240804 - L1MB8 LINE L1 -1 6177 5612 189 0 0 0 chr2 183447050 183447071 -67240783 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 632 168 0 72 chr2 183447073 183447088 -67240766 - FLAM_A SINE Alu -186 116 101 2080 130 7 0 chr2 183447088 183447389 -67240465 + AluSq SINE Alu 1 303 -10 207 0 0 0 chr2 183447389 183447412 -67240442 + (GA)n Simple_repeat Simple_repeat 2 24 0 632 168 0 72 chr2 183447412 183447520 -67240334 - FLAM_A SINE Alu -199 103 1 3075 183 23 24 chr2 183447520 183447645 -67240209 - L1MB8 LINE L1 -567 5611 5445 1189 183 38 136 chr2 183447645 183448072 -67239782 - MLT1C LTR MaLR 0 467 6 9349 209 62 7 chr2 183448082 183450574 -67237280 - L1MB8 LINE L1 -737 5447 2824 1086 182 59 5 chr2 183450602 183450789 -67237065 - AluJb SINE Alu -23 289 93 1774 52 0 9 chr2 183450789 183451019 -67236835 + L1PA5 LINE L1 5924 6151 -3 189 0 0 0 chr2 183451019 183451040 -67236814 + (TA)n Simple_repeat Simple_repeat 1 21 0 28 0 0 0 chr2 183451243 183451271 -67236583 + AT_rich Low_complexity Low_complexity 1 28 0 1885 36 0 0 chr2 183451281 183451506 -67236348 + L1PA4 LINE L1 5882 6106 -49 1192 143 22 36 chr2 183451515 183451739 -67236115 + MER96B DNA MER1_type? 2 222 -195 623 232 36 24 chr2 183452061 183452229 -67235625 + L1ME1 LINE L1 5846 6015 -151 599 212 34 0 chr2 183452231 183452377 -67235477 + L1MA10 LINE L1 6177 6327 -7 2065 164 82 6 chr2 183453568 183453934 -67233920 - MSTB LTR MaLR -32 394 1 24 32 0 0 chr2 183453935 183453966 -67233888 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr2 183454527 183454552 -67233302 + AT_rich Low_complexity Low_complexity 1 25 0 24 67 0 0 chr2 183454559 183454604 -67233250 + AT_rich Low_complexity Low_complexity 1 45 0 1464 172 4 4 chr2 183454751 183454995 -67232859 + L1MCa LINE L1 19 262 -6164 6681 129 92 96 chr2 183454995 183456603 -67231251 + L1MCa LINE L1 781 2382 -4044 208 0 62 0 chr2 183456699 183456731 -67231123 + (TA)n Simple_repeat Simple_repeat 1 34 0 4878 150 24 8 chr2 183456731 183457579 -67230275 + L1MC1 LINE L1 5472 6332 -1 21 57 0 19 chr2 183457583 183457616 -67230238 + AT_rich Low_complexity Low_complexity 1 34 -18 1513 184 14 38 chr2 183457616 183457909 -67229945 + AluJb SINE Alu 1 286 -26 21 57 0 19 chr2 183457909 183457928 -67229926 + AT_rich Low_complexity Low_complexity 34 52 0 1093 164 5 5 chr2 183458582 183458771 -67229083 + MER5A DNA MER1_type 1 189 0 503 270 68 6 chr2 183458782 183458945 -67228909 - MER5B DNA MER1_type -3 175 3 533 289 14 21 chr2 183459831 183459973 -67227881 + MIR SINE MIR 33 173 -89 985 135 0 0 chr2 183459988 183460121 -67227733 + FLAM_C SINE Alu 1 133 -10 1562 96 34 6 chr2 183460157 183460658 -67227196 - L1MA4 LINE L1 -1 6299 5588 1302 146 31 0 chr2 183461129 183461355 -67226499 + L1MB3 LINE L1 5944 6176 -7 520 30 0 0 chr2 183461671 183461737 -67226117 + L1PA2 LINE L1 6088 6153 -2 614 300 45 45 chr2 183463062 183463305 -67224549 + MIR SINE MIR 20 262 0 378 233 0 11 chr2 183463344 183463434 -67224420 + LTR67 LTR ERVL 456 544 -13 953 192 36 27 chr2 183463533 183463752 -67224102 + L1MC4 LINE L1 7690 7910 -132 301 219 70 78 chr2 183463837 183463965 -67223889 + L1MC4 LINE L1 7910 8036 -6 233 275 83 46 chr2 183464199 183464308 -67223546 - L3 LINE CR1 -3 1574 1462 1871 200 37 136 chr2 183464365 183465371 -67222483 + L1MC5 LINE L1 7005 7910 -51 4640 156 14 9 chr2 183465533 183466388 -67221466 - L1MB4 LINE L1 -1 6179 5321 210 37 0 0 chr2 183466388 183466415 -67221439 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2022 125 3 21 chr2 183466415 183466548 -67221306 - AluSx SINE Alu -30 282 148 2009 149 54 38 chr2 183466548 183466991 -67220863 + LTR7 LTR ERV1 1 450 0 2022 125 3 21 chr2 183466991 183467144 -67220710 - AluSx SINE Alu -164 148 1 1668 203 33 7 chr2 183467144 183467563 -67220291 - L1MB4 LINE L1 -818 5328 4899 2556 49 0 7 chr2 183468350 183468657 -67219197 - AluY SINE Alu -6 305 1 2282 119 0 0 chr2 183468993 183469305 -67218549 + AluSx SINE Alu 1 312 0 1209 109 0 0 chr2 183469538 183469694 -67218160 - AluSc SINE Alu -16 293 138 2485 160 15 68 chr2 183470142 183470673 -67217181 - MLT1D LTR MaLR 0 505 3 693 137 0 0 chr2 183471511 183471613 -67216241 + AluJ/FLAM SINE Alu 1 102 -210 188 33 0 33 chr2 183472528 183472558 -67215296 + (CA)n Simple_repeat Simple_repeat 2 30 0 23 0 0 0 chr2 183472730 183472753 -67215101 + AT_rich Low_complexity Low_complexity 1 23 0 1104 282 145 5 chr2 183472882 183472967 -67214887 - L2 LINE L2 -7 3306 3234 1986 130 50 13 chr2 183472967 183473268 -67214586 + AluSx SINE Alu 1 312 0 1104 282 145 5 chr2 183473268 183473576 -67214278 - L2 LINE L2 -79 3234 2858 29 28 0 0 chr2 183473666 183473702 -67214152 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr2 183473779 183473809 -67214045 + AT_rich Low_complexity Low_complexity 1 30 0 18647 51 5 1 chr2 183473826 183476990 -67210864 - L1PA5 LINE L1 -4 6150 2979 6410 121 5 26 chr2 183477067 183478316 -67209538 + L1MA2 LINE L1 4906 6125 -179 2200 113 0 10 chr2 183478316 183478626 -67209228 + AluSc SINE Alu 1 307 -2 6410 121 5 26 chr2 183478626 183478803 -67209051 + L1MA2 LINE L1 6125 6304 0 21 0 0 0 chr2 183478803 183478824 -67209030 + AT_rich Low_complexity Low_complexity 1 21 0 389 235 87 43 chr2 183478845 183478960 -67208894 - L2 LINE L2 0 3272 3153 516 216 5 98 chr2 183478960 183479154 -67208700 + LTR41 LTR ERVL 1 176 -597 336 216 57 82 chr2 183479320 183479514 -67208340 + LTR41 LTR ERVL 582 770 -3 477 294 131 63 chr2 183479642 183480115 -67207739 - MLT1J LTR MaLR -6 505 1 1763 181 3 3 chr2 183481114 183481401 -67206453 - AluJb SINE Alu -25 287 1 1797 167 18 0 chr2 183481614 183481895 -67205959 + AluJo SINE Alu 5 290 -22 287 288 189 13 chr2 183482529 183482682 -67205172 - MLT1H1 LTR MaLR -53 502 323 2316 93 3 6 chr2 183483050 183483362 -67204492 - AluY SINE Alu 0 311 1 344 369 99 0 chr2 183483963 183484104 -67203750 - MER91A DNA MER1_type 0 196 42 1733 159 9 48 chr2 183486907 183487222 -67200632 + AluJo SINE Alu 1 303 -9 648 292 82 8 chr2 183487720 183487963 -67199891 - MIR SINE MIR 0 262 2 499 269 99 29 chr2 183489451 183489622 -67198232 + MER5A DNA MER1_type 6 188 -1 1838 161 79 15 chr2 183489663 183490109 -67197745 + L1MB5 LINE L1 5589 6054 -120 609 86 0 0 chr2 183490122 183490203 -67197651 + HY4 scRNA scRNA 2 82 -11 517 119 0 0 chr2 183490242 183490326 -67197528 + L1MB4 LINE L1 6068 6151 -29 3498 132 87 23 chr2 183491436 183491942 -67195912 + Tigger2 DNA MER2_type 1 566 -2152 2218 84 40 3 chr2 183491942 183492240 -67195614 - AluSx SINE Alu -3 309 1 3498 132 87 23 chr2 183492240 183492432 -67195422 + Tigger2 DNA MER2_type 566 744 -1974 1003 154 67 59 chr2 183492500 183492753 -67195101 + Tigger2 DNA MER2_type 2463 2717 -1 495 247 130 19 chr2 183492863 183493017 -67194837 - MIR SINE MIR -71 191 21 21 0 0 0 chr2 183493088 183493109 -67194745 + AT_rich Low_complexity Low_complexity 1 21 0 298 357 76 43 chr2 183493190 183493518 -67194336 - L2 LINE L2 -2050 1264 926 329 275 93 44 chr2 183494589 183494771 -67193083 + L2 LINE L2 3106 3296 -17 23 54 0 0 chr2 183495023 183495060 -67192794 + AT_rich Low_complexity Low_complexity 1 37 0 212 0 36 0 chr2 183495527 183495555 -67192299 + (CA)n Simple_repeat Simple_repeat 1 29 0 2457 63 46 3 chr2 183495798 183496149 -67191705 + THE1C LTR MaLR 2 367 -8 456 135 0 0 chr2 183496158 183496232 -67191622 + (CA)n Simple_repeat Simple_repeat 2 75 0 1974 101 17 0 chr2 183500748 183501035 -67186819 + AluY SINE Alu 1 292 -19 1572 104 134 15 chr2 183501591 183501860 -67185994 + AluSx SINE Alu 2 302 0 2001 156 0 0 chr2 183502159 183502461 -67185393 - AluSx SINE Alu -10 302 1 44 35 0 0 chr2 183502472 183502530 -67185324 + AT_rich Low_complexity Low_complexity 1 58 0 28 48 0 0 chr2 183502681 183502723 -67185131 + AT_rich Low_complexity Low_complexity 1 42 0 2141 84 81 0 chr2 183502780 183503065 -67184789 - AluSg SINE Alu -1 309 2 2379 67 0 3 chr2 183503542 183503862 -67183992 - AluY SINE Alu 0 319 1 362 312 149 27 chr2 183504131 183504352 -67183502 - L1ME LINE L1 -384 5737 5490 2187 122 0 0 chr2 183504653 183504949 -67182905 + AluSx SINE Alu 1 296 -16 573 237 105 26 chr2 183505166 183505356 -67182498 + MIR SINE MIR 58 262 0 1511 197 11 0 chr2 183505670 183505934 -67181920 - AluJb SINE Alu -25 287 21 1845 174 14 0 chr2 183506317 183506610 -67181244 - AluJo SINE Alu -15 297 1 25 0 0 0 chr2 183507010 183507035 -67180819 + AT_rich Low_complexity Low_complexity 1 25 0 1865 155 3 7 chr2 183507380 183507677 -67180177 - AluSx SINE Alu -16 296 1 401 185 0 0 chr2 183507960 183508025 -67179829 + AluJo SINE Alu 1 65 -247 1216 155 75 13 chr2 183508252 183508478 -67179376 + AluJo SINE Alu 63 302 -10 2303 103 0 0 chr2 183508708 183509000 -67178854 - AluSg1 SINE Alu -17 292 1 2117 206 68 54 chr2 183509815 183510312 -67177542 - MLT1E2 LTR MaLR -1 625 116 2575 77 0 0 chr2 183510312 183510623 -67177231 - AluSx SINE Alu 0 312 2 2117 206 68 54 chr2 183510623 183510741 -67177113 - MLT1E2 LTR MaLR -510 116 1 382 232 27 0 chr2 183510741 183510853 -67177001 - Charlie2 DNA MER1_type -22 2840 2726 499 228 69 37 chr2 183510884 183511130 -67176724 - Charlie2 DNA MER1_type -206 2656 2403 * 1478 251 136 16 chr2 183511104 183511655 -67176199 - Charlie2 DNA MER1_type -2155 627 11 2512 108 65 83 chr2 183511990 183512477 -67175377 + Tigger3b DNA MER2_type 103 580 -2448 2263 91 20 0 chr2 183512477 183512775 -67175079 - AluSq SINE Alu -9 304 1 2512 108 65 83 chr2 183512775 183512853 -67175001 + Tigger3b DNA MER2_type 580 658 -573 2213 83 0 39 chr2 183512861 183513173 -67174681 - AluSg SINE Alu -10 300 1 1021 143 194 8 chr2 183513177 183513414 -67174440 + Tigger3b DNA MER2_type 950 1230 -1 236 161 0 54 chr2 183513633 183513689 -67174165 + MADE1 DNA Mariner 21 73 -7 1339 235 94 74 chr2 183514577 183515075 -67172779 + MLT1J LTR MaLR 4 511 0 241 236 104 19 chr2 183515829 183515935 -67171919 - MER103 DNA DNA -48 118 4 391 238 95 0 chr2 183516681 183516786 -67171068 + L2 LINE L2 3156 3270 -2 295 174 0 184 chr2 183517306 183517415 -67170439 - MER58C DNA MER1_type 0 215 127 2848 89 73 94 chr2 183517629 183518257 -67169597 - MER4B LTR ERV1 0 779 1 636 175 0 0 chr2 183519815 183519918 -67167936 - Tigger7 DNA MER2_type 0 2587 2485 1279 219 9 4 chr2 183519922 183520155 -67167699 - Tigger7 DNA MER2_type -471 234 1 1881 256 47 11 chr2 183520253 183520812 -67167042 - L1MC4 LINE L1 -226 7816 7238 1017 219 107 135 chr2 183520808 183521101 -67166753 - L1MC4 LINE L1 -809 7080 6780 * 2030 158 99 10 chr2 183521101 183521493 -67166361 - MSTA LTR MaLR -1 427 1 1017 219 107 135 chr2 183521493 183521771 -67166083 - L1MC4 LINE L1 -1109 6780 6444 355 284 0 0 chr2 183522428 183522502 -67165352 + MIR3 SINE MIR 87 160 -48 654 288 98 71 chr2 183522603 183522622 -67165232 + L1ME LINE L1 5315 5332 -789 1688 198 0 3 chr2 183522622 183522910 -67164944 + AluJo SINE Alu 4 290 -22 654 288 98 71 chr2 183522910 183523268 -67164586 + L1ME LINE L1 5332 5704 -417 348 176 0 47 chr2 183523498 183523583 -67164271 + L1ME4a LINE L1 5985 6065 -56 950 158 7 26 chr2 183523696 183523848 -67164006 + FRAM SINE Alu 1 146 -30 183 42 0 0 chr2 183523853 183523877 -67163977 + (CA)n Simple_repeat Simple_repeat 2 25 0 217 213 0 0 chr2 183523877 183523924 -67163930 + CT-rich Low_complexity Low_complexity 2 48 0 279 0 0 0 chr2 183523961 183523992 -67163862 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 330 26 0 0 chr2 183523991 183524030 -67163824 + (TC)n Simple_repeat Simple_repeat 1 39 0 2013 86 69 3 chr2 183524246 183524536 -67163318 + AluSx SINE Alu 1 309 -3 2346 82 0 3 chr2 183524922 183525227 -67162627 + AluY SINE Alu 3 306 -5 360 111 0 0 chr2 183525627 183525681 -67162173 + (TA)n Simple_repeat Simple_repeat 1 54 0 1634 162 19 44 chr2 183525686 183526001 -67161853 - AluJo SINE Alu 0 312 6 1435 186 43 46 chr2 183526058 183526429 -67161425 - L1ME1 LINE L1 -9 6157 5788 2271 86 30 3 chr2 183527020 183527323 -67160531 - AluSx SINE Alu -1 311 1 196 256 73 61 chr2 183527470 183527552 -67160302 - L2 LINE L2 -5 3267 3185 603 343 60 0 chr2 183527599 183527815 -67160039 - MIR SINE MIR -14 248 20 271 280 38 91 chr2 183528335 183528467 -67159387 + L2 LINE L2 3165 3289 -24 283 244 77 0 chr2 183529218 183529296 -67158558 - L2 LINE L2 -38 3275 3192 260 284 63 0 chr2 183530593 183530688 -67157166 - MER103 DNA DNA -11 155 55 266 177 62 100 chr2 183531002 183531132 -67156722 - L1MC5 LINE L1 -385 7576 7452 310 224 30 0 chr2 183531146 183531212 -67156642 + Tigger5 DNA MER2_type 11 78 -2245 401 167 0 0 chr2 183531212 183531272 -67156582 - Tigger5 DNA MER2_type -3 2320 2261 416 199 30 179 chr2 183531277 183531579 -67156275 - L1MC5 LINE L1 -544 7417 7161 431 135 0 14 chr2 183531606 183531680 -67156174 - AluY SINE Alu -158 153 81 1764 127 6 76 chr2 183531681 183532011 -67155843 - AluJo SINE Alu -5 307 1 374 243 62 14 chr2 183532011 183532155 -67155699 - L1MC5 LINE L1 -785 7176 7026 2004 161 27 3 chr2 183532329 183532665 -67155189 + MER2 DNA MER2_type 1 344 0 24 0 0 0 chr2 183532674 183532698 -67155156 + AT_rich Low_complexity Low_complexity 1 24 0 574 240 74 0 chr2 183532869 183533044 -67154810 - L1M4 LINE L1 -997 5149 4962 795 260 65 19 chr2 183533288 183533596 -67154258 - L1M4 LINE L1 -1224 4922 4601 2115 131 0 10 chr2 183533597 183533909 -67153945 - AluSx SINE Alu -3 309 1 736 249 170 14 chr2 183533950 183534402 -67153452 + L1M4 LINE L1 3474 4025 -2121 325 157 0 0 chr2 183534442 183534493 -67153361 - Tigger1 DNA MER2_type -2367 51 1 1714 153 115 26 chr2 183534520 183534945 -67152909 + Charlie1b DNA MER1_type 59 521 -2 399 193 114 0 chr2 183535135 183535223 -67152631 - MLT1G LTR MaLR -38 552 455 784 202 60 11 chr2 183535271 183535454 -67152400 - L1MCa LINE L1 -6216 210 19 203 265 128 51 chr2 183536105 183536222 -67151632 + L2 LINE L2 3187 3312 -1 28 29 0 0 chr2 183536439 183536474 -67151380 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr2 183536576 183536612 -67151242 + AT_rich Low_complexity Low_complexity 1 36 0 1786 232 73 25 chr2 183537246 183538198 -67149656 - L1ME1 LINE L1 -8 6158 4946 2330 91 3 0 chr2 183538198 183538495 -67149359 - AluSp SINE Alu -15 298 1 1786 232 73 25 chr2 183538495 183538784 -67149070 - L1ME1 LINE L1 -1220 4946 4672 324 236 67 0 chr2 183538776 183538865 -67148989 - L1ME LINE L1 -675 5487 5393 * 784 292 65 20 chr2 183538886 183539321 -67148533 - L2 LINE L2 -233 3080 2523 1664 179 0 23 chr2 183539456 183539764 -67148090 - AluJo SINE Alu -11 301 1 269 218 265 29 chr2 183540033 183540203 -67147651 - HAL1b LINE L1 -216 1132 923 488 220 82 13 chr2 183540206 183540365 -67147489 - HAL1b LINE L1 -462 886 717 791 256 235 26 chr2 183540371 183540878 -67146976 - L2 LINE L2 -1143 2171 1559 252 229 143 19 chr2 183540883 183540988 -67146866 - L1ME4a LINE L1 -188 5933 5816 476 294 27 16 chr2 183541037 183541221 -67146633 - L1ME4a LINE L1 -394 5727 5542 182 256 0 0 chr2 183543623 183543666 -67144188 + L2 LINE L2 3230 3272 0 230 271 52 83 chr2 183543907 183544003 -67143851 - L2 LINE L2 0 3272 3180 23 0 0 0 chr2 183544590 183544613 -67143241 + AT_rich Low_complexity Low_complexity 1 23 0 232 218 0 18 chr2 183545911 183545966 -67141888 + (TA)n Simple_repeat Simple_repeat 1 54 0 26 64 0 0 chr2 183547982 183548029 -67139825 + AT_rich Low_complexity Low_complexity 1 47 0 182 267 0 44 chr2 183548099 183548144 -67139710 - L2 LINE L2 -2823 491 449 31 44 0 0 chr2 183548949 183548994 -67138860 + AT_rich Low_complexity Low_complexity 1 45 0 217 268 28 0 chr2 183549619 183549690 -67138164 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 326 288 56 12 chr2 183549700 183549860 -67137994 - L1ME4a LINE L1 -224 5897 5731 1570 281 141 35 chr2 183550072 183551006 -67136848 + L2 LINE L2 2144 3215 -98 240 214 124 45 chr2 183551435 183551524 -67136330 + MIR3 SINE MIR 110 205 -3 27 0 0 0 chr2 183551530 183551557 -67136297 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 183551645 183551668 -67136186 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 183552454 183552475 -67135379 + AT_rich Low_complexity Low_complexity 1 21 0 633 195 91 26 chr2 183553294 183553448 -67134406 + FRAM SINE Alu 1 161 -15 1760 176 7 7 chr2 183553833 183554135 -67133719 + AluJb SINE Alu 1 302 -10 294 352 78 28 chr2 183555622 183555764 -67132090 + MIR3 SINE MIR 54 202 -6 2093 105 0 7 chr2 183555811 183556120 -67131734 + AluSx SINE Alu 1 307 0 2241 88 0 0 chr2 183556360 183556663 -67131191 - AluSg SINE Alu 0 303 1 1769 180 101 111 chr2 183557249 183557529 -67130325 - L1ME2 LINE L1 -152 6012 5731 9658 33 3 169 chr2 183557529 183559191 -67128663 - SVA Other Other 0 1386 1 1769 180 101 111 chr2 183559191 183559516 -67128338 - L1ME2 LINE L1 -433 5731 5413 1182 150 162 12 chr2 183559591 183559838 -67128016 - AluJo SINE Alu -18 284 1 357 188 7 139 chr2 183559843 183559863 -67127991 - L1ME2 LINE L1 -846 5300 5279 2165 126 0 0 chr2 183559863 183560164 -67127690 - AluSx SINE Alu -11 301 1 1885 130 23 0 chr2 183560168 183560469 -67127385 - AluSq SINE Alu -5 308 1 357 188 7 139 chr2 183560469 183560587 -67127267 - L1ME2 LINE L1 -870 5276 5176 1169 195 117 6 chr2 183560595 183560929 -67126925 - L1ME2 LINE L1 -2993 3153 2783 21 36 0 0 chr2 183561463 183561491 -67126363 + AT_rich Low_complexity Low_complexity 1 28 0 1736 150 79 0 chr2 183563944 183564224 -67123630 - AluJb SINE Alu -6 306 5 438 295 114 0 chr2 183564447 183564596 -67123258 + MIR3 SINE MIR 30 195 -13 22 0 0 0 chr2 183565336 183565358 -67122496 + AT_rich Low_complexity Low_complexity 1 22 0 4872 29 7 8 chr2 183565670 183566262 -67121592 - LTR10C LTR ERV1 0 591 1 418 283 110 7 chr2 183566452 183566597 -67121257 - MIR SINE MIR -54 208 49 196 245 163 38 chr2 183566901 183567003 -67120851 + MIR SINE MIR 32 143 -65 1227 215 66 37 chr2 183567003 183567315 -67120539 + L1ME1 LINE L1 5777 6103 -63 2143 122 7 0 chr2 183567315 183567619 -67120235 + AluSx SINE Alu 1 306 -6 1227 215 66 37 chr2 183567619 183567683 -67120171 + L1ME1 LINE L1 6103 6164 -2 183 280 96 64 chr2 183568493 183568618 -67119236 - L2 LINE L2 -6 3307 3179 359 267 11 11 chr2 183570798 183570888 -67116966 + MER58 DNA MER1_type 13 102 -113 350 218 129 0 chr2 183570957 183571058 -67116796 + L2 LINE L2 3156 3269 -44 2130 83 28 7 chr2 183571337 183571625 -67116229 + AluSx SINE Alu 12 305 -7 1225 174 5 14 chr2 183571766 183571973 -67115881 - AluJb SINE Alu -20 292 88 23 0 0 0 chr2 183572165 183572188 -67115666 + AT_rich Low_complexity Low_complexity 1 23 0 2222 107 0 16 chr2 183572290 183572607 -67115247 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 183573946 183573967 -67113887 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr2 183574036 183574078 -67113776 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 183574604 183574628 -67113226 + AT_rich Low_complexity Low_complexity 1 24 0 2265 99 3 0 chr2 183574842 183575136 -67112718 - AluSx SINE Alu -17 295 1 26 30 0 0 chr2 183575275 183575308 -67112546 + AT_rich Low_complexity Low_complexity 1 33 0 200 339 144 8 chr2 183575376 183575494 -67112360 + MIR SINE MIR 67 200 -62 609 280 43 36 chr2 183576249 183576528 -67111326 + L1MD2 LINE L1 5694 5974 -385 * 1936 160 102 5 chr2 183576293 183576687 -67111167 + L1MB5 LINE L1 5731 6162 -12 2294 92 7 0 chr2 183577525 183577818 -67110036 - AluSp SINE Alu -18 295 1 372 111 0 192 chr2 183578066 183578165 -67109689 + MADE1 DNA Mariner 1 80 0 257 325 117 0 chr2 183578697 183578817 -67109037 - L2 LINE L2 -21 3292 3159 24 0 0 0 chr2 183578911 183578935 -67108919 + AT_rich Low_complexity Low_complexity 1 24 0 902 129 0 0 chr2 183580009 183580133 -67107721 + AluSq/x SINE Alu 1 124 -188 420 20 0 0 chr2 183581119 183581168 -67106686 + (TG)n Simple_repeat Simple_repeat 2 50 0 1900 135 55 3 chr2 183581174 183581463 -67106391 - AluSx SINE Alu -6 306 3 325 385 74 0 chr2 183581835 183581957 -67105897 - L2 LINE L2 -40 3232 3102 8345 27 3 1 chr2 183582061 183583828 -67104026 - L1PA3 LINE L1 -1 6154 4384 227 167 104 0 chr2 183583945 183583993 -67103861 - MER116 DNA Mariner -27 53 1 2065 118 0 24 chr2 183584648 183584944 -67102910 - AluSx SINE Alu -18 294 6 454 172 69 11 chr2 183588129 183588216 -67099638 - MER81 DNA DNA -20 94 3 1830 147 13 20 chr2 183588446 183588746 -67099108 + AluJo SINE Alu 1 298 -14 5869 32 0 0 chr2 183589222 183589908 -67097946 + L1PA4 LINE L1 5457 6142 -13 31 58 0 0 chr2 183589920 183589972 -67097882 + AT_rich Low_complexity Low_complexity 1 52 0 788 221 1 8 chr2 183590129 183590299 -67097555 + L1PA16 LINE L1 5986 6146 -16 21 0 0 0 chr2 183590551 183590572 -67097282 + AT_rich Low_complexity Low_complexity 1 21 0 305 281 34 17 chr2 183590763 183590880 -67096974 + L1ME3A LINE L1 5841 5962 -208 28 29 0 0 chr2 183592314 183592349 -67095505 + AT_rich Low_complexity Low_complexity 1 35 0 264 100 0 0 chr2 183593219 183593259 -67094595 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 70 0 0 chr2 183593515 183593558 -67094296 + AT_rich Low_complexity Low_complexity 1 43 0 38 51 0 0 chr2 183593905 183593964 -67093890 + AT_rich Low_complexity Low_complexity 1 59 0 1740 250 56 51 chr2 183594643 183595286 -67092568 + L2 LINE L2 2204 2849 -465 338 303 43 64 chr2 183595295 183595483 -67092371 - L2 LINE L2 -10 3303 3120 12460 154 32 17 chr2 183596867 183601892 -67085962 - L1MA2 LINE L1 -6 7717 346 469 167 42 67 chr2 183601891 183602011 -67085843 - L1MA2 LINE L1 -7432 133 17 * 1840 109 106 0 chr2 183602145 183602410 -67085444 - AluSx SINE Alu -19 293 1 1625 193 15 0 chr2 183603160 183603434 -67084420 + AluJo SINE Alu 2 279 -33 2269 156 174 60 chr2 183603434 183603984 -67083870 + LTR18B LTR ERVL 2 614 0 25 0 0 0 chr2 183603996 183604021 -67083833 + AT_rich Low_complexity Low_complexity 1 25 0 318 315 119 40 chr2 183604083 183604385 -67083469 + L1M4 LINE L1 3357 3682 -2464 1411 205 30 3 chr2 183604416 183604713 -67083141 - L1ME LINE L1 -351 5884 5580 637 213 93 11 chr2 183604708 183604891 -67082963 - L1ME LINE L1 -2392 3823 3626 * 635 294 160 11 chr2 183605005 183605101 -67082753 - L1ME LINE L1 -5951 445 365 1854 161 87 77 chr2 183605101 183605597 -67082257 - MLT1D LTR MaLR 0 505 5 635 294 160 11 chr2 183605597 183605857 -67081997 - L1ME LINE L1 -6031 365 36 477 229 134 10 chr2 183605866 183606099 -67081755 + L1MC4 LINE L1 7788 7995 0 463 277 140 69 chr2 183606185 183606479 -67081375 + L1M4 LINE L1 4354 4626 -1520 2309 102 0 0 chr2 183606479 183606784 -67081070 + AluSx SINE Alu 1 305 -7 463 277 140 69 chr2 183606784 183607026 -67080828 + L1M4 LINE L1 4626 4849 -1297 2170 226 74 41 chr2 183607026 183607659 -67080195 - MLT1E1 LTR MaLR 0 654 1 463 277 140 69 chr2 183607659 183607977 -67079877 + L1M4 LINE L1 4849 5270 -876 673 287 112 54 chr2 183607989 183608525 -67079329 + L1ME LINE L1 33 599 -5824 1277 245 120 11 chr2 183608613 183609054 -67078800 + L1ME LINE L1 808 1296 -5127 1536 231 35 65 chr2 183609143 183609623 -67078231 - MER74B LTR ERVL -88 534 69 1475 163 133 0 chr2 183609638 183609902 -67077952 + AluJb SINE Alu 2 300 -2 2298 89 3 0 chr2 183609905 183610197 -67077657 + AluSg SINE Alu 1 293 -17 1036 273 124 23 chr2 183610291 183610939 -67076915 + L1ME LINE L1 1355 1937 -5185 2242 128 0 0 chr2 183610939 183611251 -67076603 + AluSx SINE Alu 1 312 0 1036 273 124 23 chr2 183611251 183611277 -67076577 + L1ME LINE L1 1937 1959 -5163 2223 83 0 0 chr2 183611277 183611555 -67076299 + AluSc SINE Alu 1 278 -31 288 0 0 0 chr2 183611559 183611591 -67076263 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1036 273 124 23 chr2 183611591 183611843 -67076011 + L1ME LINE L1 1961 2553 -4569 493 298 57 60 chr2 183611875 183612244 -67075610 + L1ME LINE L1 6066 6433 -524 1596 101 0 18 chr2 183612289 183612516 -67075338 + AluY SINE Alu 83 305 -6 27 29 0 0 chr2 183613267 183613301 -67074553 + AT_rich Low_complexity Low_complexity 1 34 0 253 273 45 0 chr2 183614547 183614613 -67073241 + MER115 DNA AcHobo 9 77 -616 * 1664 233 63 9 chr2 183614596 183615168 -67072686 + Zaphod DNA AcHobo 109 740 -3291 911 226 214 15 chr2 183615232 183615442 -67072412 - LTR50 LTR ERVL -111 684 517 1742 138 80 7 chr2 183615442 183615717 -67072137 + AluJo SINE Alu 1 295 -17 911 226 214 15 chr2 183615717 183615905 -67071949 - LTR50 LTR ERVL -278 517 368 2109 153 47 40 chr2 183615905 183616061 -67071793 + Tigger2a DNA MER2_type 2 155 -2553 2347 84 7 0 chr2 183616061 183616358 -67071496 + AluSx SINE Alu 1 299 -13 2109 153 47 40 chr2 183616358 183616631 -67071223 + Tigger2a DNA MER2_type 155 434 0 911 226 214 15 chr2 183616631 183616721 -67071133 - LTR50 LTR ERVL -427 368 1 517 330 88 8 chr2 183616735 183616996 -67070858 + MLT1J LTR MaLR 108 389 -122 1205 270 128 31 chr2 183617031 183617476 -67070378 + L1MA6 LINE L1 779 1266 -6300 807 81 0 0 chr2 183617476 183617595 -67070259 - AluSg/x SINE Alu 0 301 183 6884 224 44 33 chr2 183617611 183619249 -67068605 + L1MA6 LINE L1 2781 4399 -3166 2081 126 7 3 chr2 183619249 183619543 -67068311 - AluSx SINE Alu -17 295 1 6884 224 44 33 chr2 183619543 183620306 -67067548 + L1MA6 LINE L1 4399 5212 -2353 2120 141 0 0 chr2 183620306 183620618 -67067236 + AluSx SINE Alu 1 312 0 6884 224 44 33 chr2 183620618 183620633 -67067221 + L1MA6 LINE L1 5212 5225 -2340 391 181 0 0 chr2 183620619 183620691 -67067163 + L1MA6 LINE L1 6552 6623 -942 * 1397 190 33 0 chr2 183620691 183620933 -67066921 + AluJb SINE Alu 1 250 -62 3566 122 45 20 chr2 183620933 183621531 -67066323 + L1MA6 LINE L1 6825 7437 -282 15838 108 27 2 chr2 183621539 183624573 -67063281 + L1PA8A LINE L1 2995 6103 -28 231 36 0 0 chr2 183624593 183624621 -67063233 + (TA)n Simple_repeat Simple_repeat 2 29 0 750 209 0 0 chr2 183624621 183624750 -67063104 - FLAM_C SINE Alu -3 130 2 314 307 130 28 chr2 183624762 183624977 -67062877 + L2 LINE L2 2105 2341 -973 270 305 57 34 chr2 183625190 183625367 -67062487 + L1M4 LINE L1 2197 2377 -3769 1999 141 3 7 chr2 183625593 183625897 -67061957 - AluSx SINE Alu -9 303 1 2111 155 121 16 chr2 183626023 183626410 -67061444 - MSTA LTR MaLR 0 428 1 203 175 0 0 chr2 183626700 183626740 -67061114 + T-rich Low_complexity Low_complexity 1 40 0 2324 113 0 0 chr2 183627866 183628177 -67059677 + AluSx SINE Alu 1 311 -1 353 195 58 11 chr2 183628406 183628493 -67059361 - LTR33 LTR ERVL -16 505 415 757 263 42 51 chr2 183628630 183628847 -67059007 - LTR33 LTR ERVL -306 215 1 2100 125 10 0 chr2 183628948 183629245 -67058609 - AluSx SINE Alu -12 300 1 374 260 31 0 chr2 183629268 183629364 -67058490 - MIR SINE MIR -63 145 47 21 57 0 0 chr2 183629435 183629470 -67058384 + AT_rich Low_complexity Low_complexity 1 35 0 400 334 82 37 chr2 183630385 183630822 -67057032 + L2 LINE L2 1380 1836 -1478 333 308 180 5 chr2 183630851 183631062 -67056792 + L2 LINE L2 1959 2206 -1108 464 327 0 6 chr2 183631224 183631380 -67056474 - MIR SINE MIR -28 234 80 1103 193 311 3 chr2 183631821 183632199 -67055655 - SATR1 Satellite Satellite -1 494 1 449 95 0 0 chr2 183632200 183632263 -67055591 + L1M1 LINE L1 2546 2608 -4957 314 155 113 124 chr2 183632270 183632367 -67055487 - SATR1 Satellite Satellite -138 332 237 780 40 10 0 chr2 183632380 183632480 -67055374 + L1M1 LINE L1 2600 2700 -4865 929 138 28 0 chr2 183632944 183633089 -67054765 + L1MA3 LINE L1 6157 6305 0 5476 140 33 5 chr2 183633109 183634236 -67053618 + L1PA16 LINE L1 4992 6152 -14 22 0 0 0 chr2 183634236 183634258 -67053596 + AT_rich Low_complexity Low_complexity 1 22 0 213 39 0 0 chr2 183634637 183634663 -67053191 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 2173 103 0 0 chr2 183634665 183634947 -67052907 - AluSg1 SINE Alu -27 282 1 440 248 18 0 chr2 183636433 183636546 -67051308 - L1ME3 LINE L1 0 6162 6048 413 224 0 6 chr2 183636619 183636735 -67051119 - MER5A DNA MER1_type 0 189 5 25 0 0 0 chr2 183636810 183636835 -67051019 + AT_rich Low_complexity Low_complexity 1 25 0 735 130 0 19 chr2 183636841 183636949 -67050905 - U6 snRNA snRNA -1 106 1 301 113 0 19 chr2 183637391 183637444 -67050410 + L1ME4a LINE L1 6068 6119 -2 2140 118 10 0 chr2 183637561 183637850 -67050004 - AluSx SINE Alu -20 292 1 483 343 162 18 chr2 183638814 183639202 -67048652 - L3 LINE CR1 -263 1314 871 21 36 0 0 chr2 183639202 183639230 -67048624 + AT_rich Low_complexity Low_complexity 1 28 0 2438 83 3 0 chr2 183639493 183639794 -67048060 + AluSp SINE Alu 1 302 -11 945 218 44 26 chr2 183639826 183640055 -67047799 - MIR SINE MIR -21 241 9 186 292 0 0 chr2 183640067 183640115 -67047739 - L3 LINE CR1 -858 719 672 1705 180 0 7 chr2 183640115 183640450 -67047404 - AluJb SINE Alu 0 333 1 228 299 45 0 chr2 183640485 183640552 -67047302 - L2 LINE L2 -19 3253 3184 283 271 0 0 chr2 183640578 183640648 -67047206 - MLT1K LTR MaLR -17 571 502 3350 208 19 27 chr2 183640923 183641521 -67046333 + L1ME1 LINE L1 5433 6025 -141 2408 95 0 0 chr2 183641521 183641825 -67046029 + AluSx SINE Alu 1 304 -8 3350 208 19 27 chr2 183641825 183641961 -67045893 + L1ME1 LINE L1 6025 6161 -5 217 174 0 22 chr2 183642694 183642740 -67045114 + T-rich Low_complexity Low_complexity 1 45 0 624 150 52 0 chr2 183642791 183642980 -67044874 - L1MA9 LINE L1 -22 6290 5996 308 293 82 20 chr2 183644145 183644292 -67043562 + L1ME4a LINE L1 5233 5388 -758 613 200 9 0 chr2 183644399 183644504 -67043350 - U6 snRNA snRNA -1 106 1 2177 150 45 3 chr2 183644533 183644867 -67042987 + MER7A DNA MER2_type 1 346 0 2188 124 3 0 chr2 183644872 183645179 -67042675 - AluSx SINE Alu -1 311 4 1192 259 73 60 chr2 183645179 183645803 -67042051 + L2 LINE L2 2660 3308 -5 443 304 33 6 chr2 183645811 183645992 -67041862 + L1ME4a LINE L1 5477 5662 -459 264 279 16 0 chr2 183645992 183646053 -67041801 - MLT1K LTR MaLR 0 588 527 2181 118 3 0 chr2 183646078 183646374 -67041480 - AluSp SINE Alu -16 297 1 811 306 109 28 chr2 183646475 183646871 -67040983 - LTR16A LTR ERVL -6 444 17 270 243 0 72 chr2 183647256 183647367 -67040487 + L1ME4a LINE L1 5965 6067 -54 2345 129 40 16 chr2 183647583 183647955 -67039899 - MSTB LTR MaLR -45 381 1 9033 176 55 6 chr2 183647955 183649528 -67038326 - MSTB-int LTR MaLR 0 1651 2 2855 132 39 5 chr2 183649528 183649937 -67037917 - MSTB LTR MaLR -2 424 1 452 32 16 0 chr2 183650496 183650558 -67037296 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 2543 114 33 11 chr2 183651850 183652217 -67035637 + THE1C LTR MaLR 1 375 0 981 146 0 0 chr2 183653595 183653739 -67034115 + FRAM SINE Alu 30 173 -3 674 254 77 95 chr2 183653870 183654444 -67033410 + MLT1K LTR MaLR 5 588 0 395 300 20 0 chr2 183654449 183654549 -67033305 - MIR SINE MIR -114 148 47 252 0 0 0 chr2 183654673 183654701 -67033153 + (TG)n Simple_repeat Simple_repeat 2 29 0 320 333 0 0 chr2 183655262 183655352 -67032502 + L2 LINE L2 3223 3312 -1 309 26 0 0 chr2 183656272 183656310 -67031544 + (CA)n Simple_repeat Simple_repeat 1 38 0 2078 102 20 14 chr2 183656916 183657210 -67030644 + AluSx SINE Alu 6 301 -11 1864 159 3 3 chr2 183657225 183657521 -67030333 + AluJo SINE Alu 1 296 -16 374 291 8 45 chr2 183658267 183658401 -67029453 - MIR3 SINE MIR -10 198 70 201 152 0 0 chr2 183658853 183658886 -67028968 + (TG)n Simple_repeat Simple_repeat 2 34 0 186 43 0 0 chr2 183661431 183661454 -67026400 + (CCG)n Simple_repeat Simple_repeat 2 24 0 205 136 11 102 chr2 183661876 183661964 -67025890 + G-rich Low_complexity Low_complexity 1 80 0 396 289 74 7 chr2 183662851 183662986 -67024868 - MIR3 SINE MIR -54 154 11 254 283 257 13 chr2 183663557 183663709 -67024145 + MER5A DNA MER1_type 1 189 0 1080 182 0 33 chr2 183665634 183665815 -67022039 + FAM SINE Alu 1 175 0 770 134 0 106 chr2 183665818 183665960 -67021894 + FLAM_C SINE Alu 1 127 -16 2063 149 0 0 chr2 183665976 183666277 -67021577 + AluSx SINE Alu 3 303 -9 2059 141 13 3 chr2 183666280 183666579 -67021275 + AluSx SINE Alu 1 302 -10 466 231 94 0 chr2 183666885 183667045 -67020809 - MER106B DNA MER1_type -5 1054 880 21 0 0 0 chr2 183667539 183667560 -67020294 + AT_rich Low_complexity Low_complexity 1 21 0 592 96 10 67 chr2 183667721 183667825 -67020029 + L1MB7 LINE L1 6087 6184 0 2218 129 0 0 chr2 183668394 183668696 -67019158 - AluSx SINE Alu -10 302 1 1571 97 166 35 chr2 183668708 183668967 -67018887 - AluSg1 SINE Alu -16 293 1 580 255 98 38 chr2 183669570 183670063 -67017791 - L2 LINE L2 -3 3310 2739 195 348 56 56 chr2 183670086 183670247 -67017607 + MIR3 SINE MIR 16 176 -32 2864 157 14 42 chr2 183670585 183670970 -67016884 - MER44D DNA MER2_type -1882 605 183 2032 121 8 59 chr2 183670970 183671325 -67016529 + MER1B DNA MER1_type 1 337 0 2864 157 14 42 chr2 183671325 183671493 -67016361 - MER44D DNA MER2_type -2304 183 12 192 207 0 0 chr2 183671556 183671585 -67016269 + L2 LINE L2 3262 3290 -23 386 317 116 36 chr2 183671764 183672279 -67015575 + L2 LINE L2 2696 3256 -16 2062 182 16 62 chr2 183673309 183673627 -67014227 - MER31B LTR ERV1 0 466 176 1494 151 67 32 chr2 183673627 183673912 -67013942 + AluJo SINE Alu 1 295 -17 2062 182 16 62 chr2 183673912 183674081 -67013773 - MER31B LTR ERV1 -290 176 1 384 271 42 62 chr2 183674749 183674893 -67012961 + L2 LINE L2 3172 3312 -1 225 0 0 0 chr2 183676429 183676454 -67011400 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 382 49 33 0 chr2 183676453 183676514 -67011340 + (CA)n Simple_repeat Simple_repeat 1 63 0 1672 155 0 63 chr2 183676913 183677229 -67010625 - AluJo SINE Alu -16 296 1 2226 99 10 0 chr2 183677318 183677621 -67010233 - AluSq SINE Alu -7 306 1 21 0 0 0 chr2 183677919 183677940 -67009914 + AT_rich Low_complexity Low_complexity 1 21 0 2551 34 7 0 chr2 183678343 183678639 -67009215 - AluY SINE Alu -13 298 1 2054 108 0 84 chr2 183678984 183679317 -67008537 + AluSg SINE Alu 2 306 -4 1979 148 48 62 chr2 183679438 183679681 -67008173 - Tigger2a DNA MER2_type -2275 433 197 2281 99 0 0 chr2 183679681 183679985 -67007869 + AluY SINE Alu 1 304 -7 1979 148 48 62 chr2 183679985 183680180 -67007674 - Tigger2a DNA MER2_type -2511 197 1 2352 97 0 0 chr2 183682050 183682350 -67005504 + AluSc SINE Alu 1 300 -9 2179 103 0 0 chr2 183682861 183683169 -67004685 - AluSg SINE Alu 0 308 1 515 207 69 99 chr2 183683475 183683707 -67004147 - L1ME3A LINE L1 -12 6158 5934 30 27 0 0 chr2 183683856 183683893 -67003961 + AT_rich Low_complexity Low_complexity 1 37 0 6478 24 0 1 chr2 183684168 183684921 -67002933 + L1PA4 LINE L1 5404 6155 0 21 0 0 0 chr2 183685499 183685520 -67002334 + AT_rich Low_complexity Low_complexity 1 21 0 1805 100 0 0 chr2 183686807 183687066 -67000788 - AluSc SINE Alu 0 309 51 995 68 0 0 chr2 183687066 183687184 -67000670 - AluSc SINE Alu -191 118 1 252 358 136 6 chr2 183687608 183687770 -67000084 + L2 LINE L2 3090 3272 0 608 160 0 9 chr2 183688014 183688120 -66999734 + Looper DNA T2_type 1168 1272 -286 718 198 16 0 chr2 183688201 183688327 -66999527 + MER45A DNA AcHobo 1 128 -50 662 210 18 67 chr2 183688341 183688596 -66999258 + L1MC5 LINE L1 7476 7678 -347 2526 164 82 93 chr2 183688621 183688825 -66999029 + Looper DNA T2_type 8 213 -1345 634 101 11 0 chr2 183688825 183688914 -66998940 - HY4 scRNA scRNA -3 90 1 2526 164 82 93 chr2 183688914 183689452 -66998402 + Looper DNA T2_type 213 742 -816 656 193 60 7 chr2 183689476 183689626 -66998228 + MER58B DNA MER1_type 180 337 -4 2670 160 36 8 chr2 183689636 183690136 -66997718 + Looper DNA T2_type 741 1254 -304 240 154 0 0 chr2 183690139 183690178 -66997676 + Looper DNA T2_type 1169 1207 -351 2037 73 4 4 chr2 183690179 183690439 -66997415 + AluSq SINE Alu 1 260 -53 1284 123 42 74 chr2 183690444 183690562 -66997292 - Looper DNA T2_type -67 1491 1371 2348 62 3 23 chr2 183690562 183690866 -66996988 - AluY SINE Alu -2 309 12 1284 123 42 74 chr2 183690866 183691056 -66996798 - Looper DNA T2_type -187 1371 1193 290 203 47 0 chr2 183691098 183691162 -66996692 + Looper DNA T2_type 1492 1558 0 513 293 68 15 chr2 183691162 183691425 -66996429 + L1MC4 LINE L1 7766 8042 0 351 0 0 0 chr2 183691779 183691818 -66996036 + (TG)n Simple_repeat Simple_repeat 2 40 0 199 263 121 71 chr2 183692924 183693023 -66994831 - MIR SINE MIR -157 105 2 562 314 96 13 chr2 183694936 183695165 -66992689 + MIR SINE MIR 15 262 0 * 852 264 145 51 chr2 183695160 183695188 -66992666 - L2 LINE L2 -32 3281 3257 5773 191 66 19 chr2 183695188 183695388 -66992466 - Charlie1a DNA MER1_type -1306 1455 1266 2421 59 0 7 chr2 183695388 183695678 -66992176 - AluY SINE Alu -21 290 3 5773 191 66 19 chr2 183695678 183696866 -66990988 - Charlie1a DNA MER1_type -1495 1266 1 852 264 145 51 chr2 183696866 183697287 -66990567 - L2 LINE L2 -56 3257 2793 232 280 235 0 chr2 183697287 183697419 -66990435 - MER5A DNA MER1_type 0 189 27 536 234 0 0 chr2 183697435 183697546 -66990308 - L2 LINE L2 -512 2802 2692 1016 208 56 20 chr2 183697569 183697819 -66990035 - MER46C DNA MER2_type 0 338 80 267 237 204 0 chr2 183697847 183697940 -66989914 - MER46C DNA MER2_type -225 113 2 207 0 0 0 chr2 183699336 183699359 -66988495 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1703 146 3 41 chr2 183699359 183699654 -66988200 - AluJb SINE Alu -28 284 1 601 232 92 5 chr2 183702356 183702541 -66985313 + MER105 DNA DNA 3 203 -1 185 364 27 58 chr2 183703139 183703364 -66984490 + L2 LINE L2 2866 3083 -189 22 35 0 0 chr2 183703643 183703672 -66984182 + AT_rich Low_complexity Low_complexity 1 29 0 2058 103 21 0 chr2 183703801 183704033 -66983821 - AluSx SINE Alu -24 288 47 180 0 0 0 chr2 183704033 183704053 -66983801 + (C)n Simple_repeat Simple_repeat 1 20 0 2058 103 21 0 chr2 183704053 183704102 -66983752 - AluSx SINE Alu -265 47 1 2386 84 0 0 chr2 183704404 183704712 -66983142 - AluSg SINE Alu -2 308 1 1300 157 214 10 chr2 183704788 183705087 -66982767 + Charlie1b DNA MER1_type 7 366 -157 2373 79 3 16 chr2 183705096 183705412 -66982442 - AluSp SINE Alu -1 312 1 607 108 0 43 chr2 183705462 183705601 -66982253 + (TCCC)n Simple_repeat Simple_repeat 2 134 0 1494 188 4 8 chr2 183705606 183705872 -66981982 - AluJb SINE Alu -47 265 1 2054 100 68 0 chr2 183705875 183706156 -66981698 - AluSg SINE Alu -10 300 1 227 236 393 0 chr2 183706164 183706253 -66981601 + Charlie1b DNA MER1_type 400 523 0 346 328 23 12 chr2 183706370 183706541 -66981313 - L1ME LINE L1 -339 5782 5610 249 271 14 14 chr2 183707499 183707569 -66980285 - L1ME LINE L1 -566 5604 5532 23 54 0 0 chr2 183707637 183707674 -66980180 + AT_rich Low_complexity Low_complexity 1 37 0 405 249 85 90 chr2 183707911 183708088 -66979766 - MIR SINE MIR -13 249 74 705 220 46 26 chr2 183708288 183708510 -66979344 - MER77 LTR ERV1 -1 604 380 365 143 0 26 chr2 183708525 183708602 -66979252 + (TTCC)n Simple_repeat Simple_repeat 4 78 0 558 104 0 0 chr2 183708602 183708679 -66979175 - FLAM_A SINE Alu -44 98 22 386 286 18 71 chr2 183708685 183708853 -66979001 - MER77 LTR ERV1 -213 392 234 2858 176 7 41 chr2 183709298 183709865 -66977989 - MER82 DNA MER2_type -98 555 8 2057 119 3 7 chr2 183709926 183710228 -66977626 - AluSx SINE Alu -11 301 1 837 217 259 10 chr2 183710273 183710656 -66977198 - L1MCa LINE L1 -4498 1928 1451 2055 152 45 8 chr2 183710664 183711046 -66976808 - L1PA16 LINE L1 -2 6164 5769 2371 93 24 37 chr2 183711080 183711455 -66976399 - L1PB1 LINE L1 0 6151 5782 553 167 11 0 chr2 183711455 183711629 -66976225 + (TA)n Simple_repeat Simple_repeat 1 176 0 5045 173 12 13 chr2 183711630 183713275 -66974579 - L1PB1 LINE L1 -361 5790 4150 259 277 31 0 chr2 183714385 183714450 -66973404 + L2 LINE L2 3247 3313 0 2377 86 3 0 chr2 183715638 183715939 -66971915 + AluSx SINE Alu 1 302 -10 1714 118 31 38 chr2 183716178 183716465 -66971389 + AluSq SINE Alu 24 308 -5 1298 175 75 22 chr2 183716469 183716737 -66971117 - AluJb SINE Alu -30 282 1 978 185 14 46 chr2 183717051 183717267 -66970587 + AluJo SINE Alu 1 209 -103 366 161 11 54 chr2 183717267 183717360 -66970494 + AluJo/FRAM SINE Alu 170 258 -44 555 324 80 23 chr2 183718306 183718605 -66969249 - MER102b DNA MER1_type -25 316 1 2030 141 3 7 chr2 183718938 183719242 -66968612 + AluJb SINE Alu 6 308 -4 286 148 99 25 chr2 183719320 183719401 -66968453 + MER113 DNA MER1_type? 355 441 -80 851 93 54 23 chr2 183719806 183719935 -66967919 - FLAM_C SINE Alu 0 133 1 657 262 148 22 chr2 183720449 183720678 -66967176 - MIR SINE MIR 0 262 5 225 178 0 0 chr2 183720762 183720807 -66967047 + (CA)n Simple_repeat Simple_repeat 2 46 0 1664 216 160 11 chr2 183722201 183722756 -66965098 + L1MC4a LINE L1 5317 5954 -1854 634 215 23 0 chr2 183722760 183722890 -66964964 + BC200 scRNA scRNA 1 133 -67 341 210 58 117 chr2 183723058 183723192 -66964662 + L1MC4a LINE L1 6067 6207 -1601 2301 103 0 0 chr2 183723192 183723494 -66964360 + AluSg SINE Alu 1 302 -8 294 29 0 0 chr2 183723499 183723534 -66964320 + (CA)n Simple_repeat Simple_repeat 2 36 0 341 210 58 117 chr2 183723534 183723598 -66964256 + L1MC4a LINE L1 6211 6259 -1549 210 71 0 0 chr2 183723621 183723649 -66964205 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1901 158 3 3 chr2 183723651 183723949 -66963905 - AluJb SINE Alu -14 298 1 4049 131 45 2 chr2 183723971 183724820 -66963034 - L1MA5 LINE L1 -3 6297 5371 520 163 33 0 chr2 183724890 183724982 -66962872 + BC200 scRNA scRNA 44 138 -62 230 291 114 23 chr2 183725145 183725320 -66962534 + L1MC4 LINE L1 6417 6607 -1435 2483 254 82 36 chr2 183725334 183726336 -66961518 + L1MC4 LINE L1 6703 7750 -292 2027 142 3 3 chr2 183726390 183726700 -66961154 + AluSg SINE Alu 1 310 0 36 62 0 0 chr2 183727805 183727869 -66959985 + AT_rich Low_complexity Low_complexity 1 64 0 513 143 0 24 chr2 183728580 183728664 -66959190 + FRAM/FAM SINE Alu 6 87 -98 2059 209 19 19 chr2 183728710 183729136 -66958718 - MSTB LTR MaLR 0 426 1 21 36 0 0 chr2 183729210 183729238 -66958616 + AT_rich Low_complexity Low_complexity 1 28 0 208 244 0 0 chr2 183730185 183730226 -66957628 + (TATG)n Simple_repeat Simple_repeat 3 43 0 1699 159 7 30 chr2 183730778 183731074 -66956780 - AluJo SINE Alu -23 289 1 239 272 149 9 chr2 183731362 183731476 -66956378 - L2 LINE L2 0 3313 3184 334 353 119 16 chr2 183731558 183731929 -66955925 - L2 LINE L2 -433 2881 2473 1915 284 194 16 chr2 183731952 183732164 -66955690 + L2 LINE L2 1066 1239 -2075 3782 104 0 35 chr2 183732164 183732710 -66955144 + MER1A DNA MER1_type 1 527 0 1915 284 194 16 chr2 183732710 183733460 -66954394 + L2 LINE L2 1239 2200 -1114 231 348 0 30 chr2 183733572 183733707 -66954147 + GA-rich Low_complexity Low_complexity 4 134 0 201 271 0 17 chr2 183733847 183733906 -66953948 + GA-rich Low_complexity Low_complexity 4 61 0 5711 60 11 7 chr2 183734008 183734728 -66953126 + SVA Other Other 664 1386 0 1075 188 163 0 chr2 183734729 183735006 -66952848 + L1ME2 LINE L1 5691 6012 -152 944 114 6 36 chr2 183735592 183735758 -66952096 + AluSx SINE Alu 1 161 -151 317 349 0 16 chr2 183735762 183735888 -66951966 + LTR33 LTR ERVL 15 138 -383 421 248 70 23 chr2 183736440 183736569 -66951285 + MIR SINE MIR 118 252 -10 1542 175 51 57 chr2 183737033 183737422 -66950432 + MLT1B LTR MaLR 1 387 -3 383 258 109 16 chr2 183737508 183737636 -66950218 - MIR SINE MIR -72 190 51 207 388 12 0 chr2 183738710 183738795 -66949059 - L2 LINE L2 0 3272 3187 183 129 0 0 chr2 183740104 183740135 -66947719 + (TG)n Simple_repeat Simple_repeat 2 32 0 334 161 0 32 chr2 183741098 183741160 -66946694 + MLT2D LTR ERVL 355 414 0 22 35 0 0 chr2 183741240 183741269 -66946585 + AT_rich Low_complexity Low_complexity 1 29 0 1983 159 31 6 chr2 183741402 183741754 -66946100 + MER46B DNA MER2_type 1 236 0 619 232 57 69 chr2 183741881 183742196 -66945658 + L2 LINE L2 2183 2547 -767 2191 114 143 8 chr2 183742200 183742577 -66945277 - MSTA LTR MaLR 0 428 1 291 306 24 0 chr2 183742910 183742995 -66944859 + MLT1J1 LTR MaLR 353 439 -7 1208 282 86 38 chr2 183742996 183743665 -66944189 + L2 LINE L2 2591 3313 0 2198 90 0 13 chr2 183744085 183744384 -66943470 + AluY SINE Alu 1 295 -16 2619 180 52 7 chr2 183744389 183745225 -66942629 - MER54A LTR ERVL 0 901 1 2179 133 0 0 chr2 183745557 183745857 -66941997 - AluSx SINE Alu -12 300 1 1401 163 78 44 chr2 183746352 183746762 -66941092 + LTR37A LTR ERV1 3 426 0 1788 173 7 23 chr2 183747795 183747907 -66939947 + AluJo SINE Alu 1 113 -199 1363 135 196 117 chr2 183747907 183748095 -66939759 - MER4A LTR ERV1 0 600 428 2474 54 0 3 chr2 183748095 183748390 -66939464 + AluY SINE Alu 1 294 -17 1363 135 196 117 chr2 183748390 183748757 -66939097 - MER4A LTR ERV1 -172 428 1 1788 173 7 23 chr2 183748757 183748950 -66938904 + AluJo SINE Alu 113 301 -11 4578 151 33 31 chr2 183749168 183750067 -66937787 - MER4D LTR ERV1 0 903 3 21 0 0 0 chr2 183750292 183750313 -66937541 + AT_rich Low_complexity Low_complexity 1 21 0 913 218 92 126 chr2 183750560 183751125 -66936729 - MER34C LTR ERV1 0 585 40 517 253 20 15 chr2 183751436 183751646 -66936208 - L1MEc LINE L1 -4618 1840 1467 482 173 0 0 chr2 183751995 183752070 -66935784 - Tigger5 DNA MER2_type -2 2321 2247 319 224 0 0 chr2 183752073 183752140 -66935714 + Tigger5 DNA MER2_type 2250 2316 -7 410 211 13 0 chr2 183752143 183752219 -66935635 - Tigger5 DNA MER2_type -2244 79 3 1102 233 59 40 chr2 183752265 183752742 -66935112 - L1MEc LINE L1 -4925 1471 986 1207 308 63 32 chr2 183752747 183753348 -66934506 - L1MEc LINE L1 -5753 643 24 193 324 70 14 chr2 183753355 183753426 -66934428 + MIR SINE MIR 71 145 -63 611 267 68 27 chr2 183753662 183754085 -66933769 + MLT1K LTR MaLR 95 610 -5 2395 84 7 0 chr2 183755067 183755365 -66932489 - AluSp SINE Alu -13 300 1 2168 117 0 7 chr2 183755705 183756004 -66931850 + AluSx SINE Alu 1 297 -15 872 119 78 36 chr2 183756029 183756222 -66931632 - L1MA8 LINE L1 -5 6286 6086 1381 171 130 49 chr2 183756270 183756577 -66931277 + L1MA9 LINE L1 5768 6111 -201 1909 184 0 0 chr2 183756577 183756876 -66930978 - AluJb SINE Alu -13 299 1 1381 171 130 49 chr2 183756876 183756936 -66930918 + L1MA9 LINE L1 6111 6165 -147 252 0 0 0 chr2 183757799 183757827 -66930027 + (A)n Simple_repeat Simple_repeat 1 28 0 506 257 105 6 chr2 183759706 183759877 -66927977 - MIR SINE MIR -15 247 60 318 250 115 10 chr2 183760452 183760556 -66927298 + MIR SINE MIR 86 200 -62 209 333 51 13 chr2 183760604 183760682 -66927172 - L2 LINE L2 -39 3233 3153 429 265 63 30 chr2 183760891 183761097 -66926757 - MIR SINE MIR -36 226 16 1951 145 0 7 chr2 183761315 183761605 -66926249 - AluJb SINE Alu -22 290 3 5232 172 18 35 chr2 183761763 183762022 -66925832 + L1P4 LINE L1 4125 4387 -1779 1966 118 13 40 chr2 183762022 183762326 -66925528 + AluSx SINE Alu 3 298 -14 5232 172 18 35 chr2 183762326 183763680 -66924174 + L1P4 LINE L1 4387 5700 -466 1927 153 13 3 chr2 183763846 183764153 -66923701 - AluJo SINE Alu -2 310 1 206 311 14 54 chr2 183764256 183764330 -66923524 + L2 LINE L2 3196 3266 -6 260 309 25 0 chr2 183765836 183765917 -66921937 - L2 LINE L2 0 3313 3231 26 74 0 0 chr2 183766226 183766280 -66921574 + AT_rich Low_complexity Low_complexity 1 54 0 1963 121 3 7 chr2 183766916 183767224 -66920630 - AluSc SINE Alu 0 307 1 217 282 99 0 chr2 183767523 183767594 -66920260 + L2 LINE L2 3157 3234 -38 228 188 83 0 chr2 183769564 183769612 -66918242 + L2 LINE L2 3262 3313 0 243 0 0 0 chr2 183771461 183771488 -66916366 + (A)n Simple_repeat Simple_repeat 1 27 0 2471 63 3 0 chr2 183772340 183772640 -66915214 + AluY SINE Alu 1 301 -10 1493 194 20 14 chr2 183773042 183773055 -66914799 - AluJo SINE Alu -17 295 284 216 111 0 0 chr2 183773055 183773091 -66914763 + (TGAA)n Simple_repeat Simple_repeat 4 39 0 1493 194 20 14 chr2 183773091 183773370 -66914484 - AluJo SINE Alu -28 284 1 2774 93 0 11 chr2 183773843 183774221 -66913633 + THE1C LTR MaLR 1 374 -1 1165 174 98 63 chr2 183774224 183774576 -66913278 - LTR37A LTR ERV1 -9 417 48 3216 117 70 12 chr2 183774576 183775073 -66912781 + MER1A DNA MER1_type 2 527 0 1165 174 98 63 chr2 183775073 183775117 -66912737 - LTR37A LTR ERV1 -378 48 7 199 297 47 0 chr2 183775340 183775404 -66912450 + MIR SINE MIR 64 130 -132 3281 128 16 93 chr2 183775404 183776132 -66911722 + L1MA8 LINE L1 5610 6281 -10 523 280 85 55 chr2 183776376 183776669 -66911185 + L2 LINE L2 3005 3306 -7 348 263 35 61 chr2 183776972 183777086 -66910768 - MIR3 SINE MIR -40 168 58 234 297 14 0 chr2 183777513 183777587 -66910267 + (TA)n Simple_repeat Simple_repeat 1 75 0 233 257 54 0 chr2 183777755 183777829 -66910025 - L1ME LINE L1 -194 5927 5850 30 0 0 0 chr2 183777994 183778024 -66909830 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 183778243 183778272 -66909582 + AT_rich Low_complexity Low_complexity 1 29 0 2237 109 0 3 chr2 183778331 183778625 -66909229 - AluSq SINE Alu -18 295 3 1507 126 0 5 chr2 183778654 183778868 -66908986 - AluSq SINE Alu -100 213 1 621 236 139 75 chr2 183779325 183779834 -66908020 - MER34 LTR ERV1 0 542 1 2229 94 10 7 chr2 183780916 183781213 -66906641 - AluSc SINE Alu -11 298 1 829 217 54 16 chr2 183781583 183781767 -66906087 - MIR SINE MIR -70 192 2 206 274 0 16 chr2 183781789 183781851 -66906003 + (TTTA)n Simple_repeat Simple_repeat 2 62 0 235 428 12 0 chr2 183783269 183783435 -66904419 + L2 LINE L2 2310 2477 -837 310 302 22 7 chr2 183784617 183784756 -66903098 - L1MEd LINE L1 -5082 1037 897 1414 66 0 0 chr2 183784848 183785031 -66902823 - AluY SINE Alu 0 311 129 293 268 205 31 chr2 183785769 183785896 -66901958 + MIR SINE MIR 23 171 -91 199 178 44 22 chr2 183787044 183787089 -66900765 - MIR SINE MIR -9 253 208 260 267 114 15 chr2 183787305 183787436 -66900418 - L2 LINE L2 -527 2787 2644 388 257 93 14 chr2 183787942 183788156 -66899698 + L1ME4a LINE L1 5891 6121 0 2961 194 76 27 chr2 183789183 183789880 -66897974 - L1MB8 LINE L1 -28 6150 5420 2300 72 24 3 chr2 183789922 183790214 -66897640 + AluY SINE Alu 1 298 -13 328 230 150 0 chr2 183790957 183791057 -66896797 - MIR SINE MIR -74 188 74 2121 104 11 0 chr2 183791092 183791395 -66896459 + AluSp SINE Alu 1 306 0 2248 91 13 3 chr2 183791501 183791799 -66896055 - AluSp SINE Alu -12 301 1 26 0 0 0 chr2 183793343 183793369 -66894485 + AT_rich Low_complexity Low_complexity 1 26 0 289 229 149 47 chr2 183793632 183793846 -66894008 - L1ME4a LINE L1 -51 6070 5835 317 277 0 24 chr2 183794130 183794213 -66893641 - L2 LINE L2 -54 3218 3138 25 0 0 0 chr2 183794904 183794929 -66892925 + AT_rich Low_complexity Low_complexity 1 25 0 2270 88 3 0 chr2 183794981 183795276 -66892578 - AluSq SINE Alu -17 296 1 1280 163 58 75 chr2 183795297 183795591 -66892263 - AluJo SINE Alu -23 289 1 236 205 218 0 chr2 183795750 183795828 -66892026 - MER103 DNA DNA -13 153 59 515 267 52 29 chr2 183796143 183796353 -66891501 - MER58C DNA MER1_type 0 215 1 544 265 50 56 chr2 183797138 183797181 -66890673 - MLT1J LTR MaLR -9 502 460 2212 84 0 17 chr2 183797181 183797480 -66890374 - AluSc SINE Alu -15 294 1 544 265 50 56 chr2 183797480 183797869 -66889985 - MLT1J LTR MaLR -51 460 5 207 69 0 0 chr2 183798355 183798384 -66889470 + (CA)n Simple_repeat Simple_repeat 2 30 0 1682 149 62 18 chr2 183800245 183800559 -66887295 - L1MB2 LINE L1 -44 6363 6032 243 0 0 0 chr2 183800559 183800586 -66887268 + (TG)n Simple_repeat Simple_repeat 2 28 0 1682 149 62 18 chr2 183800586 183800607 -66887247 - L1MB2 LINE L1 -375 6032 6013 574 155 21 0 chr2 183800649 183800728 -66887126 - Tigger7 DNA MER2_type 0 2487 2404 288 77 0 0 chr2 183800728 183800767 -66887087 + (TG)n Simple_repeat Simple_repeat 2 40 0 574 155 21 0 chr2 183800767 183800784 -66887070 - Tigger7 DNA MER2_type -83 2404 2389 1450 174 36 0 chr2 183800786 183801039 -66886815 - Tigger7 DNA MER2_type -471 262 1 12319 199 31 38 chr2 183801039 183803211 -66884643 - L1MB2 LINE L1 -385 6019 3833 1351 218 52 47 chr2 183803211 183803574 -66884280 - MLT1A1 LTR MaLR 0 365 1 12319 199 31 38 chr2 183803574 183804201 -66883653 - L1MB2 LINE L1 -2571 3833 3203 2336 110 0 0 chr2 183804201 183804510 -66883344 - AluSg1 SINE Alu 0 309 1 12319 199 31 38 chr2 183804510 183804654 -66883200 - L1MB2 LINE L1 -3201 3203 3059 1561 75 0 25 chr2 183804654 183804854 -66883000 - AluY SINE Alu -27 284 90 12319 199 31 38 chr2 183804854 183805255 -66882599 - L1MB2 LINE L1 -3345 3059 2657 638 224 15 22 chr2 183805255 183805389 -66882465 - FLAM_A SINE Alu 0 133 1 12319 199 31 38 chr2 183805389 183805876 -66881978 - L1MB2 LINE L1 -3747 2657 2207 228 135 0 0 chr2 183805879 183805916 -66881938 + (CA)n Simple_repeat Simple_repeat 2 38 0 2168 227 68 19 chr2 183805946 183806619 -66881235 - L1MB2 LINE L1 -4519 1794 1089 405 281 44 31 chr2 183807091 183807251 -66880603 - L1MB2 LINE L1 -5907 406 245 237 375 56 14 chr2 183807801 183807945 -66879909 + L2 LINE L2 3123 3272 0 687 268 105 15 chr2 183808158 183808392 -66879462 + MIR SINE MIR 9 262 0 635 264 136 20 chr2 183808702 183808952 -66878902 + L1ME1 LINE L1 5883 6161 -5 1528 143 105 0 chr2 183810040 183810298 -66877556 + AluSx SINE Alu 14 298 -14 2130 87 42 0 chr2 183810505 183810792 -66877062 - AluY SINE Alu -12 299 1 192 290 29 43 chr2 183810885 183810954 -66876900 - L2 LINE L2 -18 3254 3187 378 300 116 19 chr2 183811109 183811349 -66876505 - L1ME LINE L1 -435 5727 5461 1436 247 185 57 chr2 183811393 183811527 -66876327 - HAL1 LINE L1 -1115 1392 1277 2442 58 0 13 chr2 183811527 183811835 -66876019 + AluY SINE Alu 1 304 -7 1436 247 185 57 chr2 183811835 183812635 -66875219 - HAL1 LINE L1 -1230 1277 338 512 254 109 36 chr2 183814288 183814453 -66873401 - MIR SINE MIR -71 191 15 2397 78 7 0 chr2 183814735 183815031 -66872823 - AluSp SINE Alu -14 299 2 25 0 0 0 chr2 183816475 183816500 -66871354 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 183817405 183817434 -66870420 + AT_rich Low_complexity Low_complexity 1 29 0 205 167 28 0 chr2 183818386 183818422 -66869432 + (TG)n Simple_repeat Simple_repeat 2 38 0 364 266 104 39 chr2 183818857 183819011 -66868843 + MIR SINE MIR 92 255 -7 226 266 7 21 chr2 183819566 183819640 -66868214 + MIR SINE MIR 78 131 -77 320 329 58 39 chr2 183820191 183820346 -66867508 + MIR3 SINE MIR 36 193 -15 409 302 19 0 chr2 183820408 183820514 -66867340 + MIR SINE MIR 39 146 -62 2290 102 0 3 chr2 183820623 183820937 -66866917 + AluSq SINE Alu 1 313 0 321 254 8 68 chr2 183822782 183822900 -66864954 + MIR SINE MIR 75 185 -77 1877 160 0 7 chr2 183823504 183823798 -66864056 - AluJb SINE Alu -20 292 1 219 301 80 18 chr2 183823900 183824013 -66863841 - L2 LINE L2 -5 3308 3189 401 205 96 45 chr2 183826112 183826131 -66861723 - L1MA10 LINE L1 -2 6332 6314 759 166 101 18 chr2 183826131 183826300 -66861554 - L1ME1 LINE L1 -9 6157 5975 485 262 26 31 chr2 183827654 183827845 -66860009 - L1ME4a LINE L1 -3 6118 5929 1957 133 0 17 chr2 183828407 183828707 -66859147 - AluSx SINE Alu -17 295 1 27 29 0 0 chr2 183828718 183828752 -66859102 + AT_rich Low_complexity Low_complexity 1 34 0 32 57 0 0 chr2 183828852 183828905 -66858949 + AT_rich Low_complexity Low_complexity 1 53 0 341 189 159 83 chr2 183829785 183829917 -66857937 + MIR3 SINE MIR 42 183 -25 285 301 48 10 chr2 183830190 183830293 -66857561 - MIR SINE MIR -3 259 153 1686 167 26 10 chr2 183830905 183831210 -66856644 - AluJo SINE Alu -2 310 1 1370 148 117 22 chr2 183832101 183832425 -66855429 - Charlie1 DNA MER1_type -2 2759 167 * 2890 166 50 7 chr2 183832416 183832976 -66854878 - Charlie1 DNA MER1_type -468 2293 1710 2412 75 0 0 chr2 183833168 183833462 -66854392 + AluSc SINE Alu 1 294 -15 22 56 0 0 chr2 183833706 183833742 -66854112 + AT_rich Low_complexity Low_complexity 1 36 0 220 273 52 52 chr2 183834371 183834448 -66853406 - L2 LINE L2 -2 3270 3194 426 267 178 26 chr2 183834523 183834714 -66853140 - MIR SINE MIR -30 232 13 44 20 0 0 chr2 183834722 183834773 -66853081 + AT_rich Low_complexity Low_complexity 1 51 0 24 32 0 0 chr2 183835130 183835161 -66852693 + AT_rich Low_complexity Low_complexity 1 31 0 234 213 0 21 chr2 183835217 183835264 -66852590 + L2 LINE L2 3263 3308 -5 22 70 0 0 chr2 183835380 183835423 -66852431 + AT_rich Low_complexity Low_complexity 1 43 0 213 323 132 2 chr2 183836039 183836167 -66851687 + MIR3 SINE MIR 4 108 -100 315 0 0 0 chr2 183836784 183836819 -66851035 + (TG)n Simple_repeat Simple_repeat 2 36 0 408 343 30 8 chr2 183839845 183839979 -66847875 + MIR3 SINE MIR 3 139 -69 282 205 84 24 chr2 183840041 183840124 -66847730 + MIR SINE MIR 126 213 -49 518 316 54 25 chr2 183841043 183841283 -66846571 - MIR SINE MIR -12 250 6 23 68 0 0 chr2 183843294 183843338 -66844516 + AT_rich Low_complexity Low_complexity 1 44 0 200 227 0 0 chr2 183843807 183843851 -66844003 + T-rich Low_complexity Low_complexity 1 44 0 217 268 28 0 chr2 183843963 183844034 -66843820 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 326 288 56 12 chr2 183844044 183844204 -66843650 - L1ME4a LINE L1 -224 5897 5731 396 313 112 32 chr2 183844416 183844764 -66843090 + L2 LINE L2 2144 2519 -795 207 0 0 0 chr2 183845545 183845568 -66842286 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1693 142 3 41 chr2 183845568 183845863 -66841991 - AluJb SINE Alu -28 284 1 416 35 17 0 chr2 183847526 183847584 -66840270 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 454 156 0 56 chr2 183848911 183849001 -66838853 - MER81 DNA DNA -29 85 1 1787 150 13 20 chr2 183849229 183849529 -66838325 + AluJo SINE Alu 1 298 -14 316 121 108 0 chr2 183850007 183850090 -66837764 + L1P2 LINE L1 5460 5551 -604 466 262 26 31 chr2 183900570 183900761 -66787093 + L1ME4a LINE L1 5929 6118 -3 758 167 94 21 chr2 183902115 183902303 -66785551 + L1ME1 LINE L1 5975 6332 -2 325 237 25 85 chr2 183903581 183903699 -66784155 + MIR SINE MIR 75 185 -77 1906 160 0 7 chr2 183904303 183904597 -66783257 - AluJb SINE Alu -20 292 1 220 283 106 44 chr2 183904699 183904812 -66783042 - L2 LINE L2 -5 3308 3189 228 188 83 0 chr2 183907161 183907209 -66780645 - L2 LINE L2 0 3313 3262 217 282 99 0 chr2 183909179 183909250 -66778604 - L2 LINE L2 -38 3234 3157 1964 121 3 7 chr2 183909549 183909857 -66777997 + AluSc SINE Alu 1 307 0 26 74 0 0 chr2 183910493 183910547 -66777307 + AT_rich Low_complexity Low_complexity 1 54 0 260 309 25 0 chr2 183910856 183910937 -66776917 + L2 LINE L2 3231 3313 0 25 0 0 0 chr2 183911380 183911405 -66776449 + AT_rich Low_complexity Low_complexity 1 25 0 206 311 14 54 chr2 183912443 183912517 -66775337 - L2 LINE L2 -6 3266 3196 1927 153 13 3 chr2 183912620 183912927 -66774927 + AluJo SINE Alu 1 310 -2 1698 130 135 35 chr2 183913120 183913182 -66774672 - L1MB1 LINE L1 -15 6174 6120 1909 184 0 0 chr2 183913182 183913481 -66774373 + AluJb SINE Alu 1 299 -13 1698 130 135 35 chr2 183913481 183913788 -66774066 - L1MB1 LINE L1 -69 6120 5768 834 135 78 36 chr2 183913836 183914029 -66773825 + L1MA8 LINE L1 6086 6286 -5 359 115 0 0 chr2 183914054 183914106 -66773748 - Alu SINE Alu -5 297 246 252 0 0 0 chr2 183915283 183915311 -66772543 + (A)n Simple_repeat Simple_repeat 1 28 0 506 257 105 6 chr2 183917190 183917361 -66770493 - MIR SINE MIR -15 247 60 318 250 115 10 chr2 183917936 183918040 -66769814 + MIR SINE MIR 86 200 -62 209 333 51 13 chr2 183918088 183918166 -66769688 - L2 LINE L2 -39 3233 3153 429 265 63 30 chr2 183918375 183918581 -66769273 - MIR SINE MIR -36 226 16 1951 145 0 7 chr2 183918799 183919089 -66768765 - AluJb SINE Alu -22 290 3 4776 204 17 47 chr2 183919247 183919506 -66768348 + L1 LINE L1 4125 4390 -1756 1966 118 13 40 chr2 183919506 183919810 -66768044 + AluSx SINE Alu 3 298 -14 4776 204 17 47 chr2 183919810 183920798 -66767056 + L1 LINE L1 4390 5335 -811 4907 123 21 1 chr2 183921050 183921875 -66765979 + L1PA16 LINE L1 5289 6164 -2 513 316 54 25 chr2 183922320 183922560 -66765294 + MIR SINE MIR 6 250 -12 275 205 84 24 chr2 183923479 183923562 -66764292 - MIR SINE MIR -49 213 126 405 343 30 8 chr2 183923624 183923758 -66764096 - MIR3 SINE MIR -69 139 3 270 0 0 0 chr2 183926832 183926862 -66760992 + (CA)n Simple_repeat Simple_repeat 1 30 0 241 324 120 2 chr2 183927479 183927607 -66760247 - MIR3 SINE MIR -96 112 4 22 70 0 0 chr2 183928223 183928266 -66759588 + AT_rich Low_complexity Low_complexity 1 43 0 229 213 0 21 chr2 183928382 183928429 -66759425 - L2 LINE L2 -5 3308 3263 24 32 0 0 chr2 183928485 183928516 -66759338 + AT_rich Low_complexity Low_complexity 1 31 0 44 20 0 0 chr2 183928873 183928924 -66758930 + AT_rich Low_complexity Low_complexity 1 51 0 405 267 178 26 chr2 183928932 183929123 -66758731 + MIR SINE MIR 13 232 -30 195 250 0 0 chr2 183929221 183929265 -66758589 + MIR SINE MIR 209 252 -10 22 56 0 0 chr2 183929904 183929940 -66757914 + AT_rich Low_complexity Low_complexity 1 36 0 2468 75 0 0 chr2 183930184 183930478 -66757376 - AluSc SINE Alu -15 294 1 2963 166 50 7 chr2 183930670 183931230 -66756624 + Charlie1 DNA MER1_type 1710 2293 -468 1416 148 117 22 chr2 183931221 183931545 -66756309 + Charlie1 DNA MER1_type 167 2759 -2 * 1726 167 26 10 chr2 183932436 183932741 -66755113 + AluJo SINE Alu 1 310 -2 277 301 48 10 chr2 183933353 183933456 -66754398 + MIR SINE MIR 153 259 -3 351 189 159 83 chr2 183933729 183933861 -66753993 - MIR3 SINE MIR -25 183 42 32 57 0 0 chr2 183934741 183934794 -66753060 + AT_rich Low_complexity Low_complexity 1 53 0 27 29 0 0 chr2 183934894 183934928 -66752926 + AT_rich Low_complexity Low_complexity 1 34 0 2001 133 0 17 chr2 183934939 183935239 -66752615 + AluSx SINE Alu 1 295 -17 2435 221 78 46 chr2 183935376 183935782 -66752072 + L1MEc LINE L1 1625 2017 -4198 1662 174 7 45 chr2 183935782 183936092 -66751762 + AluJo SINE Alu 1 298 -14 2435 221 78 46 chr2 183936092 183936864 -66750990 + L1MEc LINE L1 2017 2837 -3378 1761 148 92 6 chr2 183936864 183937181 -66750673 + MER7A DNA MER2_type 5 346 0 2435 221 78 46 chr2 183937181 183937602 -66750252 + L1MEc LINE L1 2837 3243 -2972 24 0 0 0 chr2 183938229 183938253 -66749601 + AT_rich Low_complexity Low_complexity 1 24 0 2020 72 4 8 chr2 183939631 183939893 -66747961 - AluY SINE Alu -6 305 45 300 291 243 31 chr2 183941982 183942463 -66745391 + L2 LINE L2 2358 2940 -374 517 235 60 12 chr2 183943911 183944077 -66743777 + MER104 DNA Tc2 4 177 -3 23 33 0 0 chr2 183944227 183944257 -66743597 + AT_rich Low_complexity Low_complexity 1 30 0 1744 142 52 0 chr2 183944978 183945246 -66742608 + AluJb SINE Alu 1 282 -30 492 173 0 0 chr2 183945500 183945575 -66742279 - Tigger5 DNA MER2_type -2 2321 2247 327 224 0 0 chr2 183945578 183945645 -66742209 + Tigger5 DNA MER2_type 2250 2316 -7 417 211 13 0 chr2 183945648 183945724 -66742130 - Tigger5 DNA MER2_type -2244 79 3 1183 233 59 40 chr2 183945770 183946247 -66741607 - L1MEc LINE L1 -4925 1471 986 1218 304 63 32 chr2 183946252 183946853 -66741001 - L1MEc LINE L1 -5753 643 24 185 324 70 14 chr2 183946860 183946931 -66740923 + MIR SINE MIR 71 145 -63 603 267 68 27 chr2 183947167 183947590 -66740264 + MLT1K LTR MaLR 95 610 -5 2418 84 7 0 chr2 183948572 183948870 -66738984 - AluSp SINE Alu -13 300 1 2301 109 0 6 chr2 183949210 183949522 -66738332 + AluSx SINE Alu 1 310 -2 281 219 0 55 chr2 183949561 183949634 -66738220 - MER34-int LTR ERV1 -5402 929 861 928 253 97 42 chr2 183949777 183950252 -66737602 - MER34-int LTR ERV1 -5759 572 72 1997 173 31 3 chr2 183950330 183950683 -66737171 - MER34 LTR ERV1 0 542 180 3417 194 97 15 chr2 183952041 183952394 -66735460 - L1MB7 LINE L1 -9 6175 5852 1618 202 58 37 chr2 183952394 183952776 -66735078 + MLT1B LTR MaLR 1 390 0 3417 194 97 15 chr2 183952776 183953206 -66734648 - L1MB7 LINE L1 -332 5852 5328 323 385 45 41 chr2 183953264 183953485 -66734369 + L2 LINE L2 2846 3067 -205 2299 119 3 0 chr2 183953881 183954191 -66733663 + AluSp SINE Alu 1 311 -2 2232 101 3 0 chr2 183954403 183954690 -66733164 - AluSc SINE Alu -21 288 1 21 0 0 0 chr2 183956558 183956579 -66731275 + AT_rich Low_complexity Low_complexity 1 21 0 1944 208 33 30 chr2 183957569 183957963 -66729891 + MLT2C1 LTR ERVL 1 395 -2 1944 204 104 15 chr2 183958792 183959254 -66728600 + MLT1F LTR MaLR 40 542 0 1801 156 7 26 chr2 183960495 183960803 -66727051 + AluJb SINE Alu 1 302 -10 1868 145 44 3 chr2 183961453 183961749 -66726105 - AluJo SINE Alu 0 312 5 253 286 11 55 chr2 183962224 183962315 -66725539 + L2 LINE L2 3142 3228 -85 752 249 23 0 chr2 183962431 183962608 -66725246 - MER58A DNA MER1_type -38 186 6 365 261 153 70 chr2 183963796 183964267 -66723587 + MLT1F1 LTR MaLR 2 536 -31 1769 138 35 3 chr2 183964579 183964869 -66722985 - MER6 DNA MER2_type -1 864 306 2161 124 79 63 chr2 183964872 183965298 -66722556 + MSTB1 LTR MaLR 2 432 0 1436 170 123 7 chr2 183965298 183965574 -66722280 - MER6 DNA MER2_type -557 308 1 1794 130 65 0 chr2 183965833 183966110 -66721744 - AluSx SINE Alu -17 295 1 438 304 83 0 chr2 183966161 183966329 -66721525 - MIR SINE MIR -35 227 46 2497 147 102 0 chr2 183966498 183967047 -66720807 + SATR1 Satellite Satellite 1 604 -30 8002 126 130 35 chr2 183967047 183968594 -66719260 + pTR5 LTR ERV1 744 2437 -1 2224 180 101 19 chr2 183968594 183969791 -66718063 + SATR1 Satellite Satellite 1 1294 0 2374 159 92 17 chr2 183969816 183971415 -66716439 + SATR1 Satellite Satellite 1 1719 -12 360 273 55 53 chr2 183973236 183973523 -66714331 + L1ME LINE L1 5303 5594 -527 1192 169 0 40 chr2 183974313 183974538 -66713316 + AluJb SINE Alu 19 234 -78 294 149 0 0 chr2 183974538 183974585 -66713269 - L1MB7 LINE L1 -99 6085 6039 2246 103 0 7 chr2 183974617 183974917 -66712937 - AluSx SINE Alu -14 298 1 543 276 133 43 chr2 183974994 183975204 -66712650 - MIR SINE MIR -21 241 13 2395 86 3 0 chr2 183975345 183975648 -66712206 - AluSx SINE Alu -8 304 1 24 0 0 0 chr2 183976400 183976424 -66711430 + AT_rich Low_complexity Low_complexity 1 24 0 207 114 0 0 chr2 183977128 183977163 -66710691 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1443 136 0 5 chr2 183977166 183977380 -66710474 - AluJo SINE Alu -25 287 75 2587 53 0 0 chr2 183978428 183978727 -66709127 - AluY SINE Alu -12 299 1 574 176 53 46 chr2 183980132 183980263 -66707591 + MLT1D LTR MaLR 1 132 -373 * 1009 164 78 77 chr2 183980259 183980645 -66707209 - MLT1A1 LTR MaLR -11 385 1 1825 168 20 68 chr2 183980645 183981045 -66706809 + MLT1D LTR MaLR 125 505 0 7131 27 0 5 chr2 183981659 183982445 -66705409 + L1PA3 LINE L1 5374 6155 0 2051 130 10 13 chr2 183984038 183984172 -66703682 + AluSx SINE Alu 3 136 -176 2698 42 0 0 chr2 183984172 183984480 -66703374 + AluY SINE Alu 1 308 -3 2051 130 10 13 chr2 183984480 183984644 -66703210 + AluSx SINE Alu 136 300 -12 499 328 36 16 chr2 183985022 183985214 -66702640 + MIR3 SINE MIR 2 197 -11 2168 248 106 89 chr2 183985313 183986709 -66701145 + L1MDa LINE L1 20 1447 -5093 1761 174 3 13 chr2 183986709 183987014 -66700840 - AluJo SINE Alu -10 302 1 2168 248 106 89 chr2 183987014 183987179 -66700675 + L1MDa LINE L1 1447 1608 -4932 460 216 158 41 chr2 183987428 183987599 -66700255 - MIR SINE MIR 0 262 72 257 289 134 0 chr2 183988165 183988262 -66699592 - MIR SINE MIR 0 262 153 675 227 159 0 chr2 183988684 183988847 -66699007 + MER21B LTR ERV1 315 503 -360 845 258 46 0 chr2 183988847 183989064 -66698790 + MIR SINE MIR 28 254 -8 225 379 0 0 chr2 183989381 183989447 -66698407 - MIR SINE MIR -112 96 31 250 309 0 29 chr2 183992627 183992770 -66695084 - L2 LINE L2 -22 3291 3156 655 192 174 18 chr2 183993461 183993523 -66694331 - MER5C DNA MER1_type -70 254 203 2366 90 0 10 chr2 183993523 183993835 -66694019 + AluSq SINE Alu 3 311 -2 655 192 174 18 chr2 183993835 183993991 -66693863 - MER5C DNA MER1_type -121 203 2 603 0 0 0 chr2 183994594 183994661 -66693193 + (CA)n Simple_repeat Simple_repeat 2 68 0 189 316 0 0 chr2 183995351 183995408 -66692446 - MIR SINE MIR -6 256 200 183 314 39 29 chr2 183995447 183995549 -66692305 - MIR SINE MIR -158 104 2 221 250 29 44 chr2 183996657 183996725 -66691129 + L2 LINE L2 3246 3312 -1 276 286 27 62 chr2 183996846 183996958 -66690896 - L3 LINE CR1 -142 1435 1328 241 290 0 0 chr2 183997017 183997086 -66690768 - L3 LINE CR1 -431 1146 1078 2048 271 105 24 chr2 183997212 183998128 -66689726 + L2 LINE L2 2232 3238 -75 1847 157 28 0 chr2 183998254 183998540 -66689314 + AluJo SINE Alu 1 294 -18 2087 118 0 4 chr2 183999069 183999349 -66688505 - AluSg SINE Alu -31 279 1 696 309 118 35 chr2 183999529 184000014 -66687840 - MARNA DNA Mariner -61 525 1 23 0 0 0 chr2 184001979 184002002 -66685852 + AT_rich Low_complexity Low_complexity 1 23 0 214 354 79 8 chr2 184003104 184003231 -66684623 + MIR3 SINE MIR 9 144 -64 224 228 0 0 chr2 184004533 184004590 -66683264 + T-rich Low_complexity Low_complexity 1 57 0 21 36 0 0 chr2 184004918 184004946 -66682908 + AT_rich Low_complexity Low_complexity 1 28 0 2036 234 118 51 chr2 184005559 184006307 -66681547 + MER21B LTR ERV1 15 812 -51 1712 166 36 0 chr2 184007408 184007685 -66680169 + AluJb SINE Alu 1 287 -25 998 209 22 0 chr2 184007869 184008051 -66679803 - MER5A DNA MER1_type -3 186 1 260 268 301 0 chr2 184008056 184008179 -66679675 + MER5B DNA MER1_type 3 162 -16 2106 223 49 19 chr2 184008214 184008744 -66679110 - MER74B LTR ERVL 0 622 77 304 215 9 80 chr2 184009220 184009330 -66678524 + MER110 LTR ERV1 80 166 -302 367 276 187 4 chr2 184009370 184009616 -66678238 + MER110 LTR ERV1 166 456 -35 394 196 33 11 chr2 184009667 184009759 -66678095 - MER103 DNA DNA -9 157 64 224 219 62 0 chr2 184010674 184010738 -66677116 + GA-rich Low_complexity Low_complexity 4 71 0 4258 129 100 17 chr2 184011694 184012032 -66675822 + L1MA4 LINE L1 5475 5784 -516 2608 51 0 0 chr2 184012032 184012343 -66675511 + AluY SINE Alu 1 311 0 4258 129 100 17 chr2 184012343 184012757 -66675097 + L1MA4 LINE L1 5784 6289 -11 4112 153 78 8 chr2 184012778 184013512 -66674342 - LTR1 LTR ERV1 0 785 1 2689 155 63 70 chr2 184014654 184014812 -66673042 - L1MB4 LINE L1 -1 6179 6021 2082 115 14 3 chr2 184014812 184015108 -66672746 + AluSx SINE Alu 1 299 -13 1560 197 11 11 chr2 184015116 184015400 -66672454 + AluJb SINE Alu 5 288 -24 2689 155 63 70 chr2 184015400 184015851 -66672003 - L1MB4 LINE L1 -166 6014 5565 312 254 85 15 chr2 184016586 184016716 -66671138 - L1ME3A LINE L1 -12 6158 6020 932 292 73 24 chr2 184016848 184017273 -66670581 - L1ME3A LINE L1 -230 5940 5495 426 260 35 18 chr2 184017895 184018064 -66669790 - HAL1b LINE L1 -20 1328 1157 228 163 0 0 chr2 184018064 184018107 -66669747 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 1809 175 53 66 chr2 184018368 184018763 -66669091 + MLT1B LTR MaLR 1 390 0 1498 124 18 6 chr2 184027045 184027491 -66660363 - LTR54 LTR ERV1 0 510 1 509 299 32 19 chr2 184030504 184030658 -66657196 - L2 LINE L2 0 3272 3117 735 252 36 32 chr2 184030760 184031010 -66656844 + L1ME LINE L1 5572 5822 -299 2123 122 3 3 chr2 184031015 184031327 -66656527 + AluSx SINE Alu 1 312 0 756 233 0 19 chr2 184031353 184031512 -66656342 - FRAM SINE Alu -10 156 1 471 224 256 80 chr2 184031558 184031956 -66655898 + L2 LINE L2 1642 2109 -1205 1447 175 4 15 chr2 184031956 184032219 -66655635 - AluJb SINE Alu -14 298 39 2165 114 3 0 chr2 184032234 184032541 -66655313 - AluSx SINE Alu -4 308 1 2016 267 122 14 chr2 184032553 184033474 -66654380 + L2 LINE L2 2143 3172 -141 429 202 60 0 chr2 184033496 184033664 -66654190 + (TA)n Simple_repeat Simple_repeat 1 178 0 341 212 20 50 chr2 184033677 184033776 -66654078 + L1MCa LINE L1 1969 2064 -4362 332 272 33 22 chr2 184033731 184033823 -66654031 - L1MC4 LINE L1 -1338 6704 6612 * 314 191 75 53 chr2 184033853 184033947 -66653907 - L1MC4 LINE L1 -1338 6704 6609 28 79 0 0 chr2 184033962 184034025 -66653829 + AT_rich Low_complexity Low_complexity 1 63 0 551 250 0 44 chr2 184034025 184034185 -66653669 + L2 LINE L2 3161 3313 0 768 282 123 38 chr2 184034584 184034900 -66652954 - LTR16C LTR ERVL -89 402 60 551 291 80 62 chr2 184035866 184036302 -66651552 - MLT1J1 LTR MaLR -2 444 1 258 105 0 0 chr2 184038538 184038576 -66649278 + (TG)n Simple_repeat Simple_repeat 1 38 0 230 186 337 35 chr2 184038771 184038857 -66648997 - MIR3 SINE MIR -11 197 86 316 252 70 35 chr2 184039322 184039437 -66648417 + L2 LINE L2 3195 3313 0 1372 134 0 117 chr2 184040282 184040573 -66647281 + AluJb SINE Alu 1 257 -55 318 313 12 0 chr2 184040824 184040907 -66646947 + MIR SINE MIR 40 123 -139 3165 172 110 28 chr2 184041160 184041472 -66646382 - L1MB5 LINE L1 -6 6168 5857 599 267 188 45 chr2 184041472 184041876 -66645978 - L1PA6 LINE L1 -290 5864 5403 270 0 0 0 chr2 184041937 184041967 -66645887 + (TG)n Simple_repeat Simple_repeat 2 31 0 1666 201 86 34 chr2 184042758 184043202 -66644652 - MLT1C LTR MaLR 0 467 1 1346 122 34 38 chr2 184043236 184043473 -66644381 - MER46A DNA MER2_type 0 236 1 2301 80 0 0 chr2 184043479 184043768 -66644086 - AluSx SINE Alu -21 291 3 620 220 130 17 chr2 184043890 184044067 -66643787 + MIR SINE MIR 66 262 0 825 127 0 0 chr2 184044451 184044577 -66643277 + FLAM_C SINE Alu 11 136 -7 278 225 34 0 chr2 184045735 184045824 -66642030 + MER102b DNA MER1_type 58 149 -192 1655 167 10 13 chr2 184045843 184046142 -66641712 - AluJo SINE Alu -13 299 2 2310 70 7 0 chr2 184046182 184046480 -66641374 + AluY SINE Alu 3 302 -9 312 268 121 26 chr2 184046480 184046670 -66641184 + MER102b DNA MER1_type 132 339 -2 2089 119 10 7 chr2 184046712 184047014 -66640840 + AluSx SINE Alu 1 303 -9 270 296 70 42 chr2 184047193 184047335 -66640519 + MER5A DNA MER1_type 44 189 0 483 259 22 29 chr2 184047833 184047972 -66639882 - MER5B DNA MER1_type -39 139 2 181 246 35 35 chr2 184047972 184048027 -66639827 - MIR3 SINE MIR -52 156 102 247 260 221 19 chr2 184049189 184049293 -66638561 - L2 LINE L2 0 3313 3189 2011 131 3 0 chr2 184049311 184049608 -66638246 - AluJb SINE Alu -14 298 1 758 169 0 0 chr2 184049697 184049815 -66638039 - FLAM_C SINE Alu -15 118 1 2246 105 0 3 chr2 184049917 184050230 -66637624 + AluSx SINE Alu 1 312 0 186 43 0 0 chr2 184050288 184050311 -66637543 + (TTA)n Simple_repeat Simple_repeat 1 23 0 2017 161 32 16 chr2 184051298 184051677 -66636177 - MLT1B LTR MaLR 0 390 6 355 325 9 18 chr2 184052908 184053022 -66634832 - MIR3 SINE MIR -32 176 64 232 306 35 12 chr2 184053334 184053419 -66634435 + L3 LINE CR1 822 908 -669 1805 156 0 7 chr2 184054313 184054615 -66633239 - AluJb SINE Alu -4 308 9 337 312 126 26 chr2 184054743 184054965 -66632889 - MIR SINE MIR -3 205 31 344 117 0 0 chr2 184055353 184055407 -66632447 - MLT2C2 LTR ERVL 0 464 400 2528 171 53 13 chr2 184055500 184055951 -66631903 - MLT2B3 LTR ERVL -85 469 1 19189 130 33 15 chr2 184055954 184058898 -66628956 - ERVL-B3 LTR ERVL -10 5754 2756 705 154 8 0 chr2 184058927 184059044 -66628810 - MLT2B3 LTR ERVL -436 118 1 392 287 113 13 chr2 184059065 184059215 -66628639 + MIR SINE MIR 28 192 -70 964 104 0 15 chr2 184059346 184059480 -66628374 - FLAM_C SINE Alu 0 133 2 210 252 122 69 chr2 184059597 184059728 -66628126 + MER91C DNA MER1_type 3 140 0 180 258 15 30 chr2 184059728 184059765 -66628089 - L2 LINE L2 -287 2985 2950 755 221 39 0 chr2 184060749 184060903 -66626951 - FRAM SINE Alu -5 161 2 494 196 13 0 chr2 184061122 184061237 -66626617 + L1MA9 LINE L1 5433 5550 -750 288 0 0 0 chr2 184061386 184061418 -66626436 + (CA)n Simple_repeat Simple_repeat 1 32 0 1062 141 12 6 chr2 184061449 184061619 -66626235 + AluSx SINE Alu 1 171 -141 3071 72 0 8 chr2 184061641 184061703 -66626151 + L1MA9 LINE L1 5650 5713 -599 3071 166 64 13 chr2 184061703 184061844 -66626010 + L1MA9 LINE L1 5650 5782 -530 279 0 0 0 chr2 184061844 184061875 -66625979 + (CA)n Simple_repeat Simple_repeat 1 31 0 3071 166 64 13 chr2 184061875 184061905 -66625949 + L1MA9 LINE L1 5782 5809 -503 1786 124 76 0 chr2 184061905 184062180 -66625674 + AluSx SINE Alu 1 296 -16 3071 166 64 13 chr2 184062180 184062634 -66625220 + L1MA9 LINE L1 5809 6308 -4 3071 72 0 8 chr2 184062634 184062654 -66625200 + L1MA9 LINE L1 5713 6308 -4 724 104 0 26 chr2 184063910 184064025 -66623829 - AluSq/x SINE Alu -200 113 2 322 225 11 0 chr2 184064096 184064185 -66623669 + LTR49-int LTR ERV1 1060 1149 -5182 217 305 139 56 chr2 184066006 184066308 -66621546 - L2 LINE L2 0 3313 2987 2215 80 0 3 chr2 184066477 184066764 -66621090 + AluSq SINE Alu 1 286 -27 192 77 0 0 chr2 184066764 184066790 -66621064 + (CA)n Simple_repeat Simple_repeat 2 27 0 25 83 0 0 chr2 184067272 184067332 -66620522 + AT_rich Low_complexity Low_complexity 1 60 0 248 81 105 151 chr2 184067453 184067526 -66620328 - L1MA9 LINE L1 -22 6290 6220 3582 124 26 2 chr2 184067526 184068067 -66619787 - MER41C LTR ERV1 0 554 1 248 81 105 151 chr2 184068067 184068079 -66619775 - L1MA9 LINE L1 -92 6220 6209 1256 139 0 20 chr2 184068395 184068626 -66619228 - AluJb SINE Alu 0 313 87 880 129 0 82 chr2 184069964 184070135 -66617719 - AluJ SINE Alu -7 305 149 6498 63 3 3 chr2 184070135 184070915 -66616939 + THE1B-int LTR MaLR 801 1580 0 2569 96 14 19 chr2 184070915 184071281 -66616573 + THE1B LTR MaLR 1 364 0 1934 136 32 0 chr2 184071283 184071562 -66616292 - THE1B LTR MaLR -76 288 1 804 124 0 0 chr2 184071562 184071675 -66616179 - AluJb SINE Alu -199 113 1 621 219 112 143 chr2 184071683 184072048 -66615806 - LTR8A LTR ERV1 -373 354 1 807 120 60 0 chr2 184072624 184072757 -66615097 - AluJo SINE Alu -8 304 164 417 139 0 51 chr2 184072909 184072988 -66614866 - AluJo SINE Alu -152 160 86 562 157 0 39 chr2 184074052 184074154 -66613700 + L1ME LINE L1 5467 5564 -602 239 197 0 33 chr2 184074165 184074226 -66613628 + L1ME LINE L1 5617 5675 -489 8083 127 5 11 chr2 184174226 184175482 -66512372 - L1M1 LINE L1 -5581 1984 737 5329 97 24 43 chr2 184175583 184175918 -66511936 + L1M1 LINE L1 1957 2297 -5268 2046 164 0 0 chr2 184175918 184176210 -66511644 + AluJb SINE Alu 1 292 -20 5329 97 24 43 chr2 184176210 184176292 -66511562 + L1M1 LINE L1 2297 2379 -5186 2056 84 4 0 chr2 184176292 184176542 -66511312 - AluSx SINE Alu -61 251 1 5329 97 24 43 chr2 184176542 184177042 -66510812 + L1M1 LINE L1 2379 2857 -4708 1185 134 75 16 chr2 184177109 184177296 -66510558 + AluSg SINE Alu 1 198 -112 1001 153 0 13 chr2 184177540 184177697 -66510157 + FRAM SINE Alu 21 175 -1 2214 119 3 0 chr2 184178311 184178613 -66509241 + AluSx SINE Alu 1 303 -9 5868 112 27 20 chr2 184179156 184180022 -66507832 - MER4D LTR ERV1 0 872 1 3389 170 35 108 chr2 184180022 184180918 -66506936 - MER4D-int LTR ERV1 0 6758 5929 349 133 55 64 chr2 184180923 184181030 -66506824 - MER4D-int LTR ERV1 -1420 5338 4835 207 0 0 0 chr2 184181699 184181722 -66506132 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 2040 107 4 0 chr2 184181889 184182151 -66505703 - AluSc SINE Alu -46 263 1 2198 148 45 38 chr2 184182210 184182608 -66505246 - MER57A LTR ERV1 -2 401 1 329 216 27 126 chr2 184182700 184182811 -66505043 - MER4D-int LTR ERV1 -4242 3878 3779 1067 176 73 74 chr2 184182980 184183118 -66504736 - MER4D-int LTR ERV1 -2136 4021 3884 1943 136 13 0 chr2 184183118 184183420 -66504434 - AluSx SINE Alu -6 306 1 1067 176 73 74 chr2 184183420 184183504 -66504350 - MER4D-int LTR ERV1 -2273 3884 3801 2240 101 0 10 chr2 184183504 184183810 -66504044 + AluY SINE Alu 1 303 -8 1067 176 73 74 chr2 184183810 184184021 -66503833 - MER4D-int LTR ERV1 -2356 3801 2465 242 65 0 0 chr2 184184115 184184146 -66503708 + MER39B LTR ERV1 3 33 -620 1646 157 5 51 chr2 184184150 184184512 -66503342 - MER4A LTR ERV1 0 664 261 369 176 88 11 chr2 184184512 184184603 -66503251 - MER4A LTR ERV1 -566 98 1 3102 163 91 5 chr2 184184610 184185173 -66502681 + MER39B LTR ERV1 41 651 -2 703 169 12 117 chr2 184185174 184185235 -66502619 - MER4B-int LTR ERV1 -2898 3700 3634 1634 162 6 47 chr2 184185235 184185556 -66502298 - AluJb SINE Alu 0 312 5 703 169 12 117 chr2 184185556 184185788 -66502066 - MER4B-int LTR ERV1 -2964 3634 2427 3403 192 69 15 chr2 184185788 184186513 -66501341 + L1M1 LINE L1 8 1850 -5715 971 166 108 0 chr2 184186508 184186786 -66501068 + L1M4 LINE L1 545 852 -6713 * 479 210 0 0 chr2 184186913 184186994 -66500860 - FLAM_A SINE Alu -22 120 40 1816 144 39 3 chr2 184187215 184187500 -66500354 + AluSx SINE Alu 7 301 -11 501 282 198 0 chr2 184187584 184187786 -66500068 - MIR SINE MIR 0 262 21 318 290 61 38 chr2 184188788 184188972 -66498882 + MIR SINE MIR 31 219 -43 717 278 107 100 chr2 184190084 184190414 -66497440 + L1M4 LINE L1 3566 3892 -3673 1843 146 11 0 chr2 184190414 184190694 -66497160 + AluSx SINE Alu 1 283 -29 717 278 107 100 chr2 184190694 184191310 -66496544 + L1M4 LINE L1 3892 4502 -3063 916 199 6 6 chr2 184191310 184191476 -66496378 + FRAM SINE Alu 1 166 0 2524 63 0 3 chr2 184191477 184191780 -66496074 + AluY SINE Alu 1 302 -9 717 278 107 100 chr2 184191780 184191878 -66495976 + L1M4 LINE L1 4501 4620 -2945 187 79 53 0 chr2 184192059 184192097 -66495757 + (GTATG)n Simple_repeat Simple_repeat 3 42 0 467 311 37 19 chr2 184192186 184192347 -66495507 + MIR SINE MIR 87 250 -12 2568 130 26 0 chr2 184192916 184193332 -66494522 - L1 LINE L1 -1195 4951 4525 1123 67 13 7 chr2 184193361 184193511 -66494343 + L1PA5 LINE L1 6004 6154 0 677 253 63 25 chr2 184193789 184194026 -66493828 - AluJb SINE Alu -61 251 6 2226 114 14 0 chr2 184194330 184194620 -66493234 - AluSx SINE Alu -18 294 1 935 115 7 50 chr2 184194621 184194760 -66493094 - AluJo/FLAM SINE Alu -169 133 1 343 274 9 0 chr2 184194988 184195094 -66492760 + L1M4 LINE L1 5033 5139 -1007 1616 174 46 7 chr2 184195602 184195883 -66491971 + AluJo SINE Alu 1 292 -20 344 321 22 54 chr2 184195911 184196095 -66491759 - MER5B DNA MER1_type 0 178 1 2072 145 0 6 chr2 184197109 184197420 -66490434 - AluJo SINE Alu -3 309 1 1963 143 10 10 chr2 184198022 184198329 -66489525 + AluJb SINE Alu 1 307 -5 226 295 9 67 chr2 184198409 184198514 -66489340 - L2 LINE L2 -11 3302 3204 2105 112 3 7 chr2 184199105 184199399 -66488455 - AluSx SINE Alu -19 293 1 1865 134 52 0 chr2 184199705 184199994 -66487860 - AluSx SINE Alu 0 303 1 378 292 25 42 chr2 184200153 184200273 -66487581 - L2 LINE L2 0 3272 3155 282 258 135 0 chr2 184200440 184200529 -66487325 - L1ME4a LINE L1 -62 6059 5959 746 294 112 25 chr2 184200531 184200967 -66486887 - MLT1K LTR MaLR 0 476 3 195 373 0 13 chr2 184202105 184202180 -66485674 + MIR SINE MIR 51 124 -84 1102 146 22 40 chr2 184202504 184202730 -66485124 - MER4-int LTR ERV1 -3188 3410 3189 839 180 7 0 chr2 184202739 184202878 -66484976 - MER4D LTR ERV1 -732 140 1 2306 103 0 13 chr2 184203145 184203456 -66484398 - AluSq SINE Alu -6 307 1 926 233 58 17 chr2 184203854 184204094 -66483760 + MIR SINE MIR 13 262 0 377 324 47 40 chr2 184204156 184204596 -66483258 - L1MEd LINE L1 -893 1597 1066 204 182 0 0 chr2 184204877 184204910 -66482944 - MIR SINE MIR -59 149 117 424 275 99 55 chr2 184204974 184205156 -66482698 + L2 LINE L2 2554 2743 -571 309 37 37 74 chr2 184205157 184205211 -66482643 - L1MC1 LINE L1 0 6333 6282 2156 146 0 3 chr2 184205212 184205534 -66482320 - L1MC/D LINE L1 -543 5790 5470 * 4595 191 58 59 chr2 184205530 184206253 -66481601 - L1MCa LINE L1 -3947 2479 1757 2354 97 3 0 chr2 184206253 184206561 -66481293 + AluSp SINE Alu 5 313 0 4595 191 58 59 chr2 184206561 184206596 -66481258 - L1MCa LINE L1 -4669 1757 1723 2052 134 3 0 chr2 184206596 184206888 -66480966 - AluSx SINE Alu -19 293 1 4595 191 58 59 chr2 184206888 184207119 -66480735 - L1MCa LINE L1 -4703 1723 1493 2160 72 65 0 chr2 184207119 184207397 -66480457 + AluSg1 SINE Alu 1 296 -13 4595 191 58 59 chr2 184207397 184207787 -66480067 - L1MCa LINE L1 -4933 1493 1104 2363 104 0 0 chr2 184207787 184208094 -66479760 - AluSx SINE Alu -5 307 1 4595 191 58 59 chr2 184208094 184208391 -66479463 - L1MCa LINE L1 -5322 1104 710 422 304 92 30 chr2 184208610 184208989 -66478865 - MLT1L LTR MaLR -16 572 189 1000 191 0 0 chr2 184209334 184209496 -66478358 - FRAM SINE Alu -1 165 4 2172 117 0 28 chr2 184209508 184209825 -66478029 - AluSg SINE Alu -2 308 1 667 267 35 0 chr2 184209828 184210000 -66477854 + MER58A DNA MER1_type 47 224 0 2053 141 0 16 chr2 184210015 184210328 -66477526 - AluSx SINE Alu -4 308 1 445 282 100 18 chr2 184210827 184211047 -66476807 + L2 LINE L2 2509 2746 -568 2282 92 0 3 chr2 184211047 184211341 -66476513 + AluSx SINE Alu 3 295 -17 495 251 165 43 chr2 184211453 184211780 -66476074 + L2 LINE L2 2946 3312 -1 1560 245 34 32 chr2 184212050 184212462 -66475392 - MLT1C LTR MaLR 0 467 55 1750 165 0 36 chr2 184212814 184213123 -66474731 - AluJb SINE Alu -14 298 1 22 0 0 0 chr2 184213612 184213634 -66474220 + AT_rich Low_complexity Low_complexity 1 22 0 180 111 0 0 chr2 184214970 184214997 -66472857 + (CAT)n Simple_repeat Simple_repeat 1 27 0 2295 80 3 0 chr2 184214997 184215283 -66472571 - AluSx SINE Alu -25 287 1 225 233 0 0 chr2 184215480 184215523 -66472331 + GA-rich Low_complexity Low_complexity 2 44 0 2079 147 0 6 chr2 184216180 184216494 -66471360 - AluSx SINE Alu 0 312 1 963 253 96 31 chr2 184216643 184217011 -66470843 - HAL1 LINE L1 -590 1917 1517 1628 166 12 109 chr2 184217011 184217415 -66470439 - MLT1A1 LTR MaLR 0 365 1 963 253 96 31 chr2 184217415 184217465 -66470389 - HAL1 LINE L1 -990 1517 1472 2435 88 0 0 chr2 184218372 184218678 -66469176 + AluSg SINE Alu 1 306 -4 518 269 26 0 chr2 184218881 184219037 -66468817 + L1M4 LINE L1 4787 4946 -1200 325 333 29 0 chr2 184218993 184219098 -66468756 - L1MC/D LINE L1 -2167 5641 5534 * 1333 237 127 96 chr2 184219221 184220091 -66467763 - L2 LINE L2 -2 3311 2470 2183 179 27 38 chr2 184220091 184220539 -66467315 + L1MB5 LINE L1 5732 6174 0 1333 237 127 96 chr2 184220539 184220741 -66467113 - L2 LINE L2 -843 2470 2276 2108 105 3 17 chr2 184220741 184221035 -66466819 + AluSg SINE Alu 5 294 -16 1333 237 127 96 chr2 184221035 184221243 -66466611 - L2 LINE L2 -1037 2276 2001 270 346 25 10 chr2 184221371 184221573 -66466281 - L1M4 LINE L1 -3572 2574 2370 4473 147 50 6 chr2 184221601 184222303 -66465551 - MER44D DNA MER2_type 0 605 1 2369 85 3 0 chr2 184222729 184223023 -66464831 - AluSx SINE Alu -17 295 1 1151 229 103 24 chr2 184223129 184223334 -66464520 - MER34 LTR ERV1 0 542 355 2386 90 0 3 chr2 184223334 184223644 -66464210 + AluSx SINE Alu 1 309 -3 1151 229 103 24 chr2 184223644 184223934 -66463920 - MER34 LTR ERV1 -187 355 1 457 296 68 44 chr2 184224086 184224380 -66463474 - HAL1 LINE L1 -739 1768 1468 393 280 14 53 chr2 184224438 184224601 -66463253 - HAL1 LINE L1 -1157 1350 1195 2532 62 3 0 chr2 184224601 184224907 -66462947 - AluY SINE Alu -4 307 1 393 280 14 53 chr2 184224907 184224950 -66462904 - HAL1 LINE L1 -1312 1195 1152 1446 106 0 10 chr2 184224952 184225213 -66462641 - AluSq SINE Alu -3 310 2 218 154 0 0 chr2 184225294 184225333 -66462521 - L2 LINE L2 -1 3312 3274 902 140 7 0 chr2 184225361 184225497 -66462357 - FLAM_C SINE Alu -6 137 1 419 268 51 7 chr2 184225499 184225637 -66462217 - LTR67 LTR ERVL -4 553 410 1720 184 103 72 chr2 184225778 184225885 -66461969 + MLT1D LTR MaLR 8 110 -395 2522 56 0 7 chr2 184225885 184226189 -66461665 + AluY SINE Alu 1 302 -9 1720 184 103 72 chr2 184226189 184226564 -66461290 + MLT1D LTR MaLR 110 505 0 572 293 83 10 chr2 184227444 184227644 -66460210 + MIR SINE MIR 16 235 -27 593 279 14 0 chr2 184227696 184227843 -66460011 - MIR SINE MIR -109 153 5 871 227 122 3 chr2 184228073 184228333 -66459521 - L1ME3 LINE L1 -2 6160 5862 2436 90 0 0 chr2 184228889 184229189 -66458665 - AluSg SINE Alu -10 300 1 247 246 56 123 chr2 184230069 184230248 -66457606 + MER5B DNA MER1_type 1 167 -11 2200 125 0 3 chr2 184230592 184230905 -66456949 - AluSx SINE Alu 0 312 1 2035 149 7 3 chr2 184231069 184231378 -66456476 - AluSx SINE Alu -2 310 1 2307 106 3 0 chr2 184232325 184232636 -66455218 + AluSq SINE Alu 1 312 -1 1761 166 0 0 chr2 184233040 184233311 -66454543 + AluJo SINE Alu 36 306 -6 1893 205 89 51 chr2 184233331 184233759 -66454095 - L1MC5 LINE L1 -53 7908 7443 2328 93 0 0 chr2 184233759 184234048 -66453806 - AluSg SINE Alu -21 289 1 1893 205 89 51 chr2 184234048 184234302 -66453552 - L1MC5 LINE L1 -518 7443 7200 2420 105 0 0 chr2 184234430 184234743 -66453111 + AluSq SINE Alu 1 313 0 390 298 42 36 chr2 184234988 184235156 -66452698 + MLT1L LTR MaLR 321 489 -126 276 238 209 0 chr2 184235246 184235351 -66452503 + MLT1L LTR MaLR 489 615 0 2123 151 0 0 chr2 184235898 184236210 -66451644 + AluJo SINE Alu 1 312 0 268 318 0 11 chr2 184238277 184238365 -66449489 - MIR3 SINE MIR -24 184 98 228 111 0 0 chr2 184239192 184239228 -66448626 + (GA)n Simple_repeat Simple_repeat 1 36 0 217 200 0 0 chr2 184239471 184239506 -66448348 + C-rich Low_complexity Low_complexity 4 38 0 6104 144 99 99 chr2 184239563 184241261 -66446593 - pTR5 LTR ERV1 0 2438 741 2330 78 0 0 chr2 184241382 184241675 -66446179 + AluY SINE Alu 1 293 -18 2241 98 3 32 chr2 184242373 184242689 -66445165 + AluSx SINE Alu 1 307 -5 616 229 57 46 chr2 184243567 184243742 -66444112 + MER5A DNA MER1_type 13 189 0 1953 116 0 0 chr2 184244150 184244409 -66443445 - AluSg SINE Alu -17 293 35 1727 133 31 31 chr2 184244740 184244994 -66442860 - L1MB2 LINE L1 -2 6169 5913 884 89 7 52 chr2 184244994 184245129 -66442725 + FLAM_C SINE Alu 4 132 -1 1727 133 31 31 chr2 184245129 184245196 -66442658 - L1MB2 LINE L1 -257 5914 5848 2139 142 0 0 chr2 184245370 184245681 -66442173 + AluSx SINE Alu 1 311 -1 21 57 0 0 chr2 184245743 184245778 -66442076 + AT_rich Low_complexity Low_complexity 1 35 0 527 201 56 28 chr2 184245845 184245989 -66441865 - MER5A DNA MER1_type -2 187 40 229 216 97 89 chr2 184246346 184246538 -66441316 + MIR SINE MIR 31 221 -41 1850 153 17 7 chr2 184247495 184247790 -66440064 - AluJo SINE Alu -14 298 1 493 226 0 9 chr2 184248710 184248825 -66439029 - MER69 DNA AcHobo 0 2526 2413 1687 159 17 30 chr2 184248837 184249133 -66438721 + AluJo SINE Alu 1 292 -20 248 250 17 0 chr2 184249171 184249231 -66438623 - MER69 DNA AcHobo -116 61 1 226 196 0 0 chr2 184249834 184249880 -66437974 + L2 LINE L2 3268 3313 0 198 0 0 0 chr2 184249971 184249993 -66437861 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1100 8 0 0 chr2 184249993 184250113 -66437741 - L1PA3 LINE L1 -10 6145 6026 1009 0 0 0 chr2 184250113 184250220 -66437634 - U6 snRNA snRNA 0 107 1 352 263 18 121 chr2 184250310 184250534 -66437320 - MIR SINE MIR -14 248 48 229 278 28 46 chr2 184250671 184250741 -66437113 + MIR3 SINE MIR 98 167 -41 369 295 39 0 chr2 184250741 184250870 -66436984 - MER94 DNA DNA 0 134 1 229 278 28 46 chr2 184250870 184250907 -66436947 + MIR3 SINE MIR 167 203 -5 236 299 226 0 chr2 184251161 184251298 -66436556 - MIR SINE MIR 0 262 95 24 0 0 0 chr2 184252715 184252739 -66435115 + AT_rich Low_complexity Low_complexity 1 24 0 1275 140 192 4 chr2 184253912 184254183 -66433671 + MER33 DNA MER1_type 3 324 0 254 232 152 0 chr2 184254998 184255097 -66432757 - L1ME4a LINE L1 -4 6117 6004 281 325 63 0 chr2 184255167 184255293 -66432561 - L1ME4a LINE L1 -260 5861 5728 539 200 84 8 chr2 184255305 184255442 -66432412 - L1M3 LINE L1 -700 5483 5334 1845 151 31 14 chr2 184255444 184255736 -66432118 + AluJb SINE Alu 3 299 -13 626 220 17 0 chr2 184256587 184256705 -66431149 + AluJo SINE Alu 6 125 -187 333 0 0 0 chr2 184257059 184257096 -66430758 + (CA)n Simple_repeat Simple_repeat 1 37 0 2294 92 10 0 chr2 184257143 184257438 -66430416 - AluSp SINE Alu -15 298 1 2427 80 0 26 chr2 184258121 184258433 -66429421 - AluSg SINE Alu -6 304 1 416 143 0 0 chr2 184258459 184258522 -66429332 - U7 snRNA snRNA 0 63 1 287 258 22 0 chr2 184261896 184261985 -66425869 - MIR SINE MIR -12 250 160 1220 266 41 10 chr2 184262146 184262540 -66425314 + L1ME4a LINE L1 5521 5926 -195 367 213 128 43 chr2 184262555 184262696 -66425158 + L1ME4a LINE L1 5967 6119 -2 760 224 12 0 chr2 184262793 184262958 -66424896 + MER5B DNA MER1_type 3 169 -9 950 168 0 46 chr2 184265660 184265807 -66422047 + AluJo SINE Alu 132 271 -41 2042 98 0 4 chr2 184265807 184266072 -66421782 - AluSg SINE Alu -12 298 35 950 168 0 46 chr2 184266072 184266097 -66421757 + AluJo SINE Alu 271 296 -16 1443 257 75 31 chr2 184267700 184268155 -66419699 + MER74B LTR ERVL 74 548 -74 2039 229 82 27 chr2 184270144 184270695 -66417159 - MLT1G LTR MaLR 0 590 10 201 39 0 0 chr2 184271225 184271251 -66416603 + (A)n Simple_repeat Simple_repeat 1 26 0 569 270 107 17 chr2 184271438 184271671 -66416183 - MIR SINE MIR -2 260 7 2518 61 0 22 chr2 184271887 184272200 -66415654 + AluY SINE Alu 1 306 -5 295 250 25 12 chr2 184274224 184274304 -66413550 + L2 LINE L2 3179 3259 -54 366 244 104 17 chr2 184274332 184274447 -66413407 + MLT1F LTR MaLR 1 125 -417 412 199 191 15 chr2 184274632 184274768 -66413086 + MLT1H LTR MaLR 385 544 -5 2264 99 3 56 chr2 184276044 184276368 -66411486 + AluSp SINE Alu 1 307 -6 852 313 78 21 chr2 184277006 184277560 -66410294 - L2 LINE L2 -14 3299 2714 1762 174 7 10 chr2 184277571 184277881 -66409973 - AluJb SINE Alu -3 309 1 23 33 0 0 chr2 184277986 184278016 -66409838 + AT_rich Low_complexity Low_complexity 1 30 0 295 269 0 0 chr2 184278964 184279057 -66408797 + (CCA)n Simple_repeat Simple_repeat 1 93 0 853 191 13 0 chr2 184279385 184279537 -66408317 + AluJb SINE Alu 137 290 -22 1472 146 23 42 chr2 184279660 184279920 -66407934 + AluJo SINE Alu 1 255 -57 360 281 76 22 chr2 184279990 184280214 -66407640 - L1ME4a LINE L1 -173 5948 5713 180 0 0 0 chr2 184280327 184280347 -66407507 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 360 189 172 41 chr2 184280364 184280486 -66407368 + LTR37A LTR ERV1 39 176 -250 353 306 102 39 chr2 184280588 184281306 -66406548 - L1ME4a LINE L1 -1528 4618 3856 1740 171 35 3 chr2 184281333 184281619 -66406235 + AluJb SINE Alu 1 295 -17 490 305 43 53 chr2 184281621 184281729 -66406125 - L1ME4a LINE L1 -2334 3812 3704 1193 124 55 55 chr2 184281729 184281946 -66405908 - MER20 DNA MER1_type -1 218 2 490 305 43 53 chr2 184281946 184282139 -66405715 - L1ME4a LINE L1 -2442 3704 3514 2051 114 41 0 chr2 184282705 184282995 -66404859 - AluSp SINE Alu -11 302 1 2189 126 0 0 chr2 184283646 184283940 -66403914 - AluSx SINE Alu -18 294 1 365 262 176 48 chr2 184284510 184284697 -66403157 - MIR SINE MIR -50 212 2 24 0 0 0 chr2 184284901 184284925 -66402929 + AT_rich Low_complexity Low_complexity 1 24 0 856 161 27 0 chr2 184285674 184285823 -66402031 - L1ME1 LINE L1 -5 6161 6009 1187 156 0 0 chr2 184286244 184286411 -66401443 - FAM SINE Alu -8 167 1 884 200 78 0 chr2 184286566 184286746 -66401108 - MIR SINE MIR -27 235 42 275 228 109 43 chr2 184286954 184287046 -66400808 - MIR3 SINE MIR -16 192 95 413 233 29 0 chr2 184287308 184287411 -66400443 + MER113 DNA MER1_type? 5 110 -411 1607 138 0 31 chr2 184287503 184287764 -66400090 - AluJb SINE Alu -6 306 54 547 183 227 35 chr2 184287776 184288005 -66399849 - MER5C DNA MER1_type -21 303 31 259 217 43 0 chr2 184288089 184288158 -66399696 + MIR SINE MIR 88 159 -103 2201 90 28 0 chr2 184288319 184288607 -66399247 + AluSx SINE Alu 1 296 -16 30 0 0 0 chr2 184290073 184290103 -66397751 + AT_rich Low_complexity Low_complexity 1 30 0 313 248 234 29 chr2 184290434 184290571 -66397283 + MER5A DNA MER1_type 11 175 -14 1684 147 10 51 chr2 184290694 184291006 -66396848 - AluJo SINE Alu -13 299 1 213 255 21 64 chr2 184292868 184292962 -66394892 + L2 LINE L2 3182 3271 -1 785 186 88 10 chr2 184293265 184293458 -66394396 + Charlie4a DNA MER1_type 4 211 -297 336 131 8 4 chr2 184293494 184293601 -66394253 + Charlie4a DNA MER1_type 274 427 -81 701 192 0 54 chr2 184293628 184293798 -66394056 + FLAM_C SINE Alu 3 143 0 185 246 18 35 chr2 184293839 184293896 -66393958 + MIR SINE MIR 19 74 -134 2270 144 31 31 chr2 184294614 184295004 -66392850 + MLT1B LTR MaLR 1 390 0 288 0 0 0 chr2 184295362 184295394 -66392460 + (CA)n Simple_repeat Simple_repeat 2 33 0 2272 114 0 0 chr2 184296294 184296591 -66391263 - AluSx SINE Alu -12 300 4 21 0 0 0 chr2 184296805 184296826 -66391028 + AT_rich Low_complexity Low_complexity 1 21 0 222 37 0 0 chr2 184296907 184296934 -66390920 + (TC)n Simple_repeat Simple_repeat 2 28 0 267 31 0 0 chr2 184298365 184298397 -66389457 + (TC)n Simple_repeat Simple_repeat 1 32 0 1905 158 0 34 chr2 184298656 184298798 -66389056 + AluJo SINE Alu 1 146 -166 279 0 0 0 chr2 184298798 184298829 -66389025 + (TA)n Simple_repeat Simple_repeat 2 32 0 1905 158 0 34 chr2 184298829 184299009 -66388845 + AluJo SINE Alu 146 312 0 284 265 186 0 chr2 184299098 184299200 -66388654 + MIR SINE MIR 71 191 -71 1013 61 0 0 chr2 184300312 184300427 -66387427 + AluSq/x SINE Alu 19 133 -179 1546 197 6 25 chr2 184301992 184302307 -66385547 - AluJo SINE Alu -2 310 2 193 237 0 0 chr2 184302805 184302843 -66385011 + MIR3 SINE MIR 125 162 -46 252 302 12 0 chr2 184302891 184302977 -66384877 + MER20B DNA MER1_type 77 163 -620 342 61 0 0 chr2 184303481 184303530 -66384324 + (TC)n Simple_repeat Simple_repeat 1 49 0 1854 130 58 14 chr2 184303570 184303862 -66383992 - MER1B DNA MER1_type -1 338 34 747 292 185 26 chr2 184303968 184304499 -66383355 + L2 LINE L2 2660 3272 -41 2151 120 10 16 chr2 184304601 184304909 -66382945 - AluSx SINE Alu 0 312 7 367 280 64 19 chr2 184305417 184305574 -66382280 - MIR3 SINE MIR -15 193 30 690 313 117 43 chr2 184306332 184306869 -66380985 + MLT1K LTR MaLR 10 586 -2 5354 138 23 5 chr2 184307340 184308214 -66379640 - Ricksha DNA DNA -7 3239 2350 896 138 7 0 chr2 184308230 184308375 -66379479 - Ricksha DNA DNA -1899 147 2 326 247 37 0 chr2 184308388 184308469 -66379385 + MLT1K LTR MaLR 132 215 -373 1409 211 44 42 chr2 184308638 184308675 -66379179 + L1MC5 LINE L1 7539 7574 -421 2075 100 4 18 chr2 184308675 184308956 -66378898 + AluSg SINE Alu 1 277 -33 180 0 0 0 chr2 184308958 184308978 -66378876 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1409 211 44 42 chr2 184308978 184309377 -66378477 + L1MC5 LINE L1 7574 7995 0 717 206 0 113 chr2 184309691 184309973 -66377881 - Charlie5 DNA MER1_type -27 2585 2336 1957 188 40 48 chr2 184310360 184310679 -66377175 - MSTD LTR MaLR 0 396 79 2179 74 0 0 chr2 184310679 184310949 -66376905 + AluY SINE Alu 37 306 -5 1957 188 40 48 chr2 184310949 184311028 -66376826 - MSTD LTR MaLR -317 79 1 405 264 40 63 chr2 184311036 184311210 -66376644 + L2 LINE L2 2733 2902 -412 459 225 75 8 chr2 184311285 184311405 -66376449 + L2 LINE L2 3182 3309 -4 204 258 106 93 chr2 184311791 184311942 -66375912 - L2 LINE L2 0 3313 3161 1937 257 80 10 chr2 184312661 184313283 -66374571 + MER20B DNA MER1_type 118 783 0 292 257 129 10 chr2 184314574 184314675 -66373179 - L2 LINE L2 -7 3306 3194 197 0 0 67 chr2 184314886 184314916 -66372938 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 1594 172 28 28 chr2 184315424 184315715 -66372139 - AluJo SINE Alu -17 295 5 684 252 163 41 chr2 184315725 184316239 -66371615 - L1ME4a LINE L1 -80 6041 5451 207 227 23 0 chr2 184317122 184317166 -66370688 + MIR SINE MIR 218 262 0 27 49 0 0 chr2 184317369 184317410 -66370444 + AT_rich Low_complexity Low_complexity 1 41 0 729 263 94 18 chr2 184322073 184322297 -66365557 - MIR SINE MIR 0 262 22 201 74 0 0 chr2 184322466 184322493 -66365361 + (CA)n Simple_repeat Simple_repeat 2 28 0 1394 160 55 0 chr2 184322496 184322734 -66365120 - AluJo SINE Alu -25 287 37 292 214 126 10 chr2 184322765 184322868 -66364986 - L1ME LINE L1 -265 5856 5742 477 195 81 0 chr2 184322877 184322964 -66364890 + AluJb SINE Alu 194 287 -25 2003 156 3 0 chr2 184323185 184323486 -66364368 + AluJb SINE Alu 3 304 -8 259 311 167 0 chr2 184323698 184323830 -66364024 - MIR3 SINE MIR -14 194 41 278 228 18 0 chr2 184324128 184324185 -66363669 - L2 LINE L2 -6 3266 3209 315 279 111 39 chr2 184324785 184324993 -66362861 - L2 LINE L2 -875 2439 2217 1342 156 36 25 chr2 184325080 184325355 -66362499 - MER33 DNA MER1_type 0 324 47 390 205 77 17 chr2 184325739 184325856 -66361998 + MER113 DNA MER1_type? 7 130 -391 266 200 46 0 chr2 184325975 184326040 -66361814 + MER113 DNA MER1_type? 454 521 0 583 195 71 13 chr2 184326546 184326698 -66361156 - Charlie4a DNA MER1_type -143 365 205 1679 210 67 30 chr2 184326698 184327103 -66360751 - MLT1F1 LTR MaLR 0 567 148 816 183 78 0 chr2 184327102 184327260 -66360594 + Charlie4 DNA MER1_type 42 213 -1748 397 346 0 15 chr2 184327260 184327390 -66360464 + MLT1E LTR MaLR 1 128 -465 338 248 124 13 chr2 184328979 184329132 -66358722 + MIR SINE MIR 28 197 -65 324 242 16 0 chr2 184329405 184329467 -66358387 + MER2 DNA MER2_type 278 340 -5 1796 240 45 26 chr2 184329967 184330576 -66357278 + L2 LINE L2 2263 2938 -376 559 177 24 0 chr2 184330929 184331053 -66356801 + CT-rich Low_complexity Low_complexity 2 128 0 1837 143 13 32 chr2 184331057 184331371 -66356483 - AluJo SINE Alu -4 308 1 449 234 99 35 chr2 184332254 184332395 -66355459 + MIR3 SINE MIR 38 187 -21 749 188 0 38 chr2 184332628 184332761 -66355093 + FAM SINE Alu 40 167 -18 3451 128 40 2 chr2 184334601 184335148 -66352706 + L1MB2 LINE L1 5601 6168 -3 2298 113 3 0 chr2 184335950 184336259 -66351595 + AluSq SINE Alu 1 310 -3 196 317 100 42 chr2 184337149 184337269 -66350585 - L3b LINE CR1 -337 1246 1120 212 276 17 0 chr2 184337453 184337511 -66350343 + GA-rich Low_complexity Low_complexity 2 60 0 228 35 0 0 chr2 184339049 184339078 -66348776 + (T)n Simple_repeat Simple_repeat 1 29 0 892 155 72 10 chr2 184339885 184340079 -66347775 - L1MC2 LINE L1 -2 6342 6137 3898 154 77 25 chr2 184340079 184340843 -66347011 - L1MC3 LINE L1 -191 7594 6791 2493 58 0 0 chr2 184341038 184341333 -66346521 + AluY SINE Alu 10 304 -7 4969 135 45 87 chr2 184341784 184342787 -66345067 - L1MA6 LINE L1 0 6300 5353 1667 154 39 0 chr2 184342787 184343047 -66344807 - AluJo SINE Alu -20 292 23 4969 135 45 87 chr2 184343047 184343449 -66344405 - L1MA6 LINE L1 -947 5353 4936 2169 132 19 61 chr2 184343441 184343792 -66344062 + L1 LINE L1 4123 4454 -1692 * 2175 37 0 0 chr2 184343792 184344033 -66343821 + L1PA3 LINE L1 5911 6152 -3 2169 132 19 61 chr2 184344033 184344107 -66343747 + L1 LINE L1 4454 4530 -1616 1724 160 3 17 chr2 184344245 184344413 -66343441 - AluJb SINE Alu -12 300 136 2443 74 3 0 chr2 184344413 184344709 -66343145 - AluSx SINE Alu -15 297 1 1724 160 3 17 chr2 184344709 184344840 -66343014 - AluJb SINE Alu -176 136 5 31 26 0 0 chr2 184345632 184345670 -66342184 + AT_rich Low_complexity Low_complexity 1 38 0 3119 140 27 25 chr2 184345739 184346259 -66341595 - LTR26B LTR ERV1 -10 521 1 285 207 69 46 chr2 184346457 184346544 -66341310 - MIR SINE MIR -169 93 5 254 214 29 14 chr2 184346936 184347030 -66340824 + G-rich Low_complexity Low_complexity 1 95 0 2385 83 0 0 chr2 184348472 184348774 -66339080 - AluSx SINE Alu -10 302 1 1470 159 74 4 chr2 184349169 184349426 -66338428 - AluJb SINE Alu -23 289 15 318 174 87 0 chr2 184349439 184349508 -66338346 - MIR SINE MIR -91 171 97 2287 99 3 3 chr2 184350204 184350506 -66337348 + AluSp SINE Alu 1 302 -11 366 319 0 9 chr2 184350886 184350999 -66336855 - L2 LINE L2 -2 3311 3200 394 316 90 13 chr2 184351134 184351289 -66336565 - MIR SINE MIR -4 258 92 1510 127 201 0 chr2 184351289 184351533 -66336321 + AluSx SINE Alu 1 293 -9 21 36 0 0 chr2 184352618 184352646 -66335208 + AT_rich Low_complexity Low_complexity 1 28 0 1838 128 0 40 chr2 184353021 184353318 -66334536 + AluJb SINE Alu 12 296 -16 32 43 0 0 chr2 184353576 184353622 -66334232 + AT_rich Low_complexity Low_complexity 1 46 0 228 67 0 0 chr2 184353666 184353696 -66334158 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 649 252 177 0 chr2 184353709 184353935 -66333919 - L2 LINE L2 -39 3274 3009 434 306 69 0 chr2 184354548 184354692 -66333162 - MIR SINE MIR -108 154 1 1535 169 59 10 chr2 184355569 184355859 -66331995 + AluJo SINE Alu 1 304 -8 1282 107 60 0 chr2 184356698 184356914 -66330940 + L1MA8 LINE L1 6062 6290 -1 2228 124 0 0 chr2 184357457 184357763 -66330091 - AluSg SINE Alu -2 308 3 2855 7 7 0 chr2 184358764 184359073 -66328781 - AluYa5 SINE Alu 0 311 1 672 285 184 33 chr2 184359711 184360107 -66327747 + L2 LINE L2 362 817 -2497 294 293 0 10 chr2 184360270 184360369 -66327485 + L2 LINE L2 1820 1917 -1397 2245 131 0 0 chr2 184361651 184361963 -66325891 - AluSx SINE Alu 0 312 1 180 0 0 0 chr2 184362598 184362618 -66325236 + (T)n Simple_repeat Simple_repeat 1 20 0 2089 92 7 33 chr2 184362672 184362975 -66324879 - AluSg SINE Alu -10 300 6 30 59 0 0 chr2 184363739 184363790 -66324064 + AT_rich Low_complexity Low_complexity 1 51 0 721 82 109 45 chr2 184363797 184363907 -66323947 - FLAM_C SINE Alu -25 118 2 1726 141 0 0 chr2 184363954 184364196 -66323658 + AluSx SINE Alu 31 272 -40 443 307 52 10 chr2 184365359 184365551 -66322303 + MIR SINE MIR 11 210 -52 218 273 55 0 chr2 184365593 184365648 -66322206 - L3 LINE CR1 -11 1566 1509 1720 154 52 3 chr2 184366055 184366341 -66321513 + AluSx SINE Alu 6 305 -7 1822 129 68 18 chr2 184366588 184366868 -66320986 - AluSx SINE Alu -18 294 1 2157 127 0 0 chr2 184366877 184367211 -66320643 - AluSx SINE Alu 0 334 1 21 36 0 0 chr2 184368044 184368072 -66319782 + AT_rich Low_complexity Low_complexity 1 28 0 450 239 150 48 chr2 184368681 184368848 -66319006 + MIR SINE MIR 77 260 -2 246 284 25 0 chr2 184368989 184369070 -66318784 + MARNA DNA Mariner 485 567 -19 332 155 144 31 chr2 184369649 184369746 -66318108 + MER113 DNA MER1_type? 21 128 -393 288 311 34 50 chr2 184369866 184369985 -66317869 - MIR3 SINE MIR -36 172 56 1664 181 38 3 chr2 184370585 184370877 -66316977 + AluJo SINE Alu 1 302 -10 201 74 0 0 chr2 184370947 184370974 -66316880 + (A)n Simple_repeat Simple_repeat 1 27 0 321 256 234 0 chr2 184371089 184371226 -66316628 + MIR3 SINE MIR 39 207 -1 1894 160 7 0 chr2 184371477 184371770 -66316084 + AluSx SINE Alu 1 295 -17 1789 157 13 17 chr2 184371850 184372150 -66315704 + AluJb SINE Alu 3 301 -11 182 297 31 47 chr2 184373106 184373170 -66314684 + MER5B DNA MER1_type 91 153 -25 322 270 20 0 chr2 184373203 184373303 -66314551 + MIR SINE MIR 161 262 0 2441 78 0 7 chr2 184373624 184373931 -66313923 + AluY SINE Alu 1 305 -6 1975 132 0 7 chr2 184374216 184374511 -66313343 - AluSx SINE Alu -7 305 13 1352 160 31 51 chr2 184374900 184374973 -66312881 + MER58 DNA MER1_type 9 82 -2338 2103 127 16 0 chr2 184374973 184375280 -66312574 - AluSx SINE Alu 0 312 1 1352 160 31 51 chr2 184375280 184375462 -66312392 + MER58 DNA MER1_type 82 259 -2161 329 333 115 23 chr2 184375465 184375726 -66312128 - L2 LINE L2 -719 2595 2311 * 336 252 81 146 chr2 184375725 184376034 -66311820 - L3 LINE CR1 -446 1131 843 1858 130 54 0 chr2 184376049 184376326 -66311528 + AluJo SINE Alu 1 292 -20 2241 104 0 0 chr2 184376331 184376618 -66311236 + AluSg SINE Alu 1 287 -23 1906 170 0 0 chr2 184376756 184377056 -66310798 - AluSx SINE Alu -12 300 1 386 230 121 84 chr2 184377133 184377484 -66310370 - L1ME4a LINE L1 -105 6016 5648 1777 177 7 0 chr2 184377484 184377778 -66310076 + AluJb SINE Alu 2 297 -15 386 230 121 84 chr2 184377778 184377838 -66310016 - L1ME4a LINE L1 -473 5648 5592 2233 107 0 3 chr2 184377944 184378243 -66309611 + AluSx SINE Alu 1 298 -14 349 96 0 0 chr2 184378864 184378944 -66308910 - AluJo SINE Alu 0 327 248 1263 148 106 0 chr2 184378946 184379183 -66308671 - L1MA6 LINE L1 -72 6228 5967 830 114 47 0 chr2 184379191 184379404 -66308450 + CT-rich Low_complexity Low_complexity 1 223 0 425 131 0 0 chr2 184379404 184379465 -66308389 + (TTCC)n Simple_repeat Simple_repeat 2 62 0 845 231 78 59 chr2 184379465 184379650 -66308204 - AluJo SINE Alu -52 260 66 2191 92 3 0 chr2 184379650 184379965 -66307889 + AluSx SINE Alu 1 316 0 845 231 78 59 chr2 184379965 184380033 -66307821 - AluJo SINE Alu -246 66 1 225 143 41 20 chr2 184380041 184380090 -66307764 - L1MA6 LINE L1 -337 5960 5911 2595 65 0 0 chr2 184380401 184380708 -66307146 - AluY SINE Alu -4 307 1 2156 107 0 20 chr2 184381137 184381437 -66306417 + AluSg SINE Alu 1 294 -16 237 280 0 27 chr2 184381655 184381730 -66306124 + MIR SINE MIR 176 248 -14 1686 163 49 10 chr2 184382140 184382428 -66305426 + AluJo SINE Alu 3 301 -11 21 0 0 0 chr2 184382478 184382499 -66305355 + AT_rich Low_complexity Low_complexity 1 21 0 2269 94 0 13 chr2 184382760 184383059 -66304795 - AluSx SINE Alu -17 295 1 268 259 59 22 chr2 184383120 184383255 -66304599 - L1ME4a LINE L1 -172 5949 5810 5830 100 18 3 chr2 184383596 184383935 -66303919 - L1PA16 LINE L1 -5 6161 5828 1631 172 45 7 chr2 184383935 184384091 -66303763 - AluJb SINE Alu -11 301 152 2423 90 0 0 chr2 184384091 184384392 -66303462 - AluSx SINE Alu -9 303 3 1631 172 45 7 chr2 184384392 184384525 -66303329 - AluJb SINE Alu -160 152 1 5830 100 18 3 chr2 184384525 184385223 -66302631 - L1PA16 LINE L1 -338 5828 5118 2914 9 0 0 chr2 184385251 184385569 -66302285 + AluYb8 SINE Alu 1 318 0 595 198 6 62 chr2 184385592 184385705 -66302149 - L1PA16 LINE L1 -1020 5126 5025 2173 111 3 0 chr2 184385705 184385994 -66301860 - AluSx SINE Alu -22 290 1 595 198 6 62 chr2 184385994 184386057 -66301797 - L1PA16 LINE L1 -1121 5025 4960 47 33 0 0 chr2 184386191 184386252 -66301602 + AT_rich Low_complexity Low_complexity 1 61 0 1014 121 0 6 chr2 184386252 184386417 -66301437 - L1PA16 LINE L1 -135 6031 5868 242 251 27 49 chr2 184386430 184386613 -66301241 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 * 440 206 59 0 chr2 184386502 184386728 -66301126 + (TA)n Simple_repeat Simple_repeat 1 239 0 1911 133 73 7 chr2 184386743 184387029 -66300825 - AluSq SINE Alu -6 307 3 2429 103 0 0 chr2 184387749 184388061 -66299793 - AluSx SINE Alu 0 312 1 1921 152 0 19 chr2 184389290 184389599 -66298255 + AluSx SINE Alu 1 303 -9 22005 34 1 0 chr2 184389762 184392575 -66295279 - L1P LINE L1 -2163 3983 1169 404 42 102 8 chr2 184392676 184392794 -66295060 + (TA)n Simple_repeat Simple_repeat 2 130 0 804 159 23 8 chr2 184392794 184392926 -66294928 - AluJb SINE Alu -178 134 1 760 74 0 0 chr2 184394001 184394096 -66293758 - AluY SINE Alu -216 95 1 1893 142 7 10 chr2 184394208 184394511 -66293343 + AluJb SINE Alu 1 302 -10 666 176 20 0 chr2 184394519 184394667 -66293187 + GA-rich Low_complexity Low_complexity 1 151 0 754 240 103 40 chr2 184394955 184395334 -66292520 - L1MC5 LINE L1 -257 7704 7302 2243 110 7 0 chr2 184396254 184396562 -66291292 - AluSx SINE Alu -2 310 1 1897 123 71 0 chr2 184396749 184397018 -66290836 - AluSx SINE Alu -24 288 1 1075 219 44 7 chr2 184397084 184397358 -66290496 + L1ME2 LINE L1 5851 6134 -30 5550 56 1 0 chr2 184397544 184398236 -66289618 + L1PA6 LINE L1 5452 6144 -10 1845 172 0 25 chr2 184400040 184400360 -66287494 + AluJb SINE Alu 1 312 0 3942 184 73 122 chr2 184400489 184400556 -66287298 + L1MCa LINE L1 12 81 -5964 1461 60 0 22 chr2 184400556 184400740 -66287114 + AluY SINE Alu 131 310 -1 3942 184 73 122 chr2 184400740 184401564 -66286290 + L1MCa LINE L1 81 944 -5101 2343 101 48 28 chr2 184401564 184401921 -66285933 - THE1B LTR MaLR 0 364 1 11547 92 8 9 chr2 184401923 184403504 -66284350 - THE1B-int LTR MaLR -2 1578 1 2075 132 53 28 chr2 184403504 184403859 -66283995 - THE1B LTR MaLR 0 364 1 3942 184 73 122 chr2 184403859 184404458 -66283396 + L1MCa LINE L1 943 1194 -4851 2446 196 65 53 chr2 184404456 184405187 -66282667 + L1MCa LINE L1 1851 2572 -3992 * 1548 156 35 73 chr2 184405187 184405325 -66282529 + AluJo SINE Alu 1 143 -169 2107 83 0 24 chr2 184405325 184405614 -66282240 + AluSc SINE Alu 5 286 -23 1548 156 35 73 chr2 184405614 184405789 -66282065 + AluJo SINE Alu 143 302 -10 2446 196 65 53 chr2 184405789 184406554 -66281300 + L1MCa LINE L1 2572 3357 -3207 909 205 24 0 chr2 184406555 184406721 -66281133 + FRAM SINE Alu 1 164 -12 8163 125 30 1 chr2 184406764 184408083 -66279771 - Tigger1 DNA MER2_type -1062 1356 1 576 244 8 0 chr2 184408249 184408372 -66279482 - FLAM_C SINE Alu -19 124 1 2363 91 10 0 chr2 184408655 184408962 -66278892 + AluY SINE Alu 1 310 -1 2206 93 21 0 chr2 184409135 184409426 -66278428 - AluSp SINE Alu -16 297 1 482 270 44 7 chr2 184409540 184409677 -66278177 - MIR SINE MIR -1 261 120 2024 130 17 10 chr2 184409822 184410115 -66277739 - AluSx SINE Alu -17 295 1 1846 146 11 18 chr2 184411516 184411797 -66276057 + AluJb SINE Alu 1 279 -33 339 25 0 0 chr2 184411797 184411837 -66276017 + (CA)n Simple_repeat Simple_repeat 1 40 0 2109 69 0 0 chr2 184411854 184412128 -66275726 + L1PA5 LINE L1 5881 6154 0 39 0 0 0 chr2 184412128 184412167 -66275687 + AT_rich Low_complexity Low_complexity 1 39 0 369 288 141 6 chr2 184414513 184414683 -66273171 + MIR SINE MIR 67 259 -3 2163 110 7 0 chr2 184414754 184415053 -66272801 + AluSx SINE Alu 1 301 -11 1708 129 80 28 chr2 184415306 184415592 -66272262 - AluJb SINE Alu -11 301 1 2489 75 3 7 chr2 184415677 184415983 -66271871 + AluSp SINE Alu 1 305 -8 382 184 96 73 chr2 184417503 184417639 -66270215 + MIR SINE MIR 78 216 -46 1844 143 20 40 chr2 184417695 184417787 -66270067 + MER2 DNA MER2_type 2 94 -250 2245 84 0 7 chr2 184417787 184418109 -66269745 + AluSx SINE Alu 1 320 0 1844 143 20 40 chr2 184418109 184418365 -66269489 + MER2 DNA MER2_type 94 344 0 1747 161 0 70 chr2 184418632 184418962 -66268892 + AluSx SINE Alu 1 307 -5 2095 129 0 32 chr2 184419290 184419599 -66268255 + AluSx SINE Alu 1 299 -13 27 0 0 0 chr2 184419644 184419671 -66268183 + AT_rich Low_complexity Low_complexity 1 27 0 1518 186 35 16 chr2 184419688 184420005 -66267849 - MLT1A1 LTR MaLR -2 363 41 437 285 29 36 chr2 184420066 184420203 -66267651 - L2 LINE L2 -5 3308 3173 406 117 0 0 chr2 184420205 184420265 -66267589 - MLT1A1 LTR MaLR -305 60 1 22 35 0 0 chr2 184420408 184420437 -66267417 + AT_rich Low_complexity Low_complexity 1 29 0 2365 87 3 0 chr2 184420498 184420797 -66267057 + AluY SINE Alu 1 300 -11 21 36 0 0 chr2 184420814 184420842 -66267012 + AT_rich Low_complexity Low_complexity 1 28 0 479 291 37 15 chr2 184422349 184422483 -66265371 - L2 LINE L2 -4 3309 3173 2102 97 0 36 chr2 184422784 184423093 -66264761 + AluSx SINE Alu 1 298 -14 5725 133 45 6 chr2 184423100 184424109 -66263745 + L1MC1 LINE L1 5286 6333 0 263 335 102 23 chr2 184424110 184424286 -66263568 - L2 LINE L2 -571 2743 2554 21 0 0 0 chr2 184425312 184425333 -66262521 + AT_rich Low_complexity Low_complexity 1 21 0 2227 75 7 0 chr2 184426432 184426714 -66261140 + AluSg SINE Alu 1 284 -26 2139 110 0 0 chr2 184426907 184427220 -66260634 - AluSx SINE Alu 0 313 1 280 311 15 8 chr2 184427344 184427476 -66260378 + L1MC/D LINE L1 4881 5013 -1133 426 299 13 25 chr2 184427688 184427845 -66260009 + L1MC/D LINE L1 5278 5432 -2376 227 288 15 0 chr2 184427854 184427920 -66259934 - MIR SINE MIR -105 103 37 45 19 0 0 chr2 184428015 184428067 -66259787 + AT_rich Low_complexity Low_complexity 1 52 0 289 267 61 8 chr2 184428205 184428336 -66259518 + HAL1b LINE L1 759 896 -452 593 245 109 22 chr2 184428659 184428843 -66259011 + MIR SINE MIR 63 262 0 292 314 42 25 chr2 184429378 184429496 -66258358 + L2 LINE L2 3133 3252 -20 1905 147 6 22 chr2 184429620 184429932 -66257922 + AluJo SINE Alu 2 308 -4 2178 109 0 0 chr2 184429941 184430226 -66257628 + AluY SINE Alu 1 285 -26 22 0 0 0 chr2 184430229 184430251 -66257603 + AT_rich Low_complexity Low_complexity 1 22 0 2184 114 14 3 chr2 184431122 184431419 -66256435 - AluSx SINE Alu -12 300 1 805 159 0 14 chr2 184431423 184431561 -66256293 - AluJo SINE Alu -171 141 6 480 247 127 56 chr2 184431567 184431834 -66256020 - L1MEc LINE L1 -3961 2619 2294 799 294 66 25 chr2 184431906 184432301 -66255553 - LTR16B LTR ERVL 0 464 54 821 279 113 38 chr2 184432337 184433278 -66254576 - L1MEc LINE L1 -4585 2136 1126 1686 152 3 35 chr2 184434021 184434310 -66253544 + AluJo SINE Alu 1 280 -32 348 264 83 0 chr2 184434419 184434540 -66253314 + HAL1 LINE L1 2 132 -2375 366 260 73 32 chr2 184435954 184436017 -66251837 + MIR SINE MIR 123 182 -80 2134 123 0 3 chr2 184436017 184436310 -66251544 + AluSg SINE Alu 1 292 -18 366 260 73 32 chr2 184436310 184436369 -66251485 + MIR SINE MIR 182 250 -12 1149 74 0 19 chr2 184436407 184436569 -66251285 - L1PA10 LINE L1 0 6168 6010 445 297 101 0 chr2 184437247 184437456 -66250398 + L2 LINE L2 2349 2578 -736 307 220 441 0 chr2 184437477 184437595 -66250259 - MER91A DNA MER1_type -26 170 1 1770 190 0 0 chr2 184437765 184438055 -66249799 + AluSx SINE Alu 1 290 -22 232 0 0 0 chr2 184438382 184438413 -66249441 - L1MA3 LINE L1 -9 6296 6266 355 337 59 0 chr2 184438422 184438624 -66249230 + L1MC4a LINE L1 5452 5665 -456 2198 108 3 16 chr2 184438645 184438961 -66248893 + AluSx SINE Alu 1 312 0 273 235 18 118 chr2 184439125 184439295 -66248559 + L1MC4a LINE L1 5789 5941 -1867 25 65 0 0 chr2 184439443 184439489 -66248365 + AT_rich Low_complexity Low_complexity 1 46 0 1534 250 21 45 chr2 184439500 184439819 -66248035 + L1ME LINE L1 138 440 -5765 2361 120 0 0 chr2 184439819 184440128 -66247726 + AluSx SINE Alu 1 309 -3 1534 250 21 45 chr2 184440128 184440367 -66247487 + L1ME LINE L1 440 683 -5522 2446 68 3 16 chr2 184440538 184440849 -66247005 + AluSp SINE Alu 1 307 -6 321 319 18 57 chr2 184441383 184441715 -66246139 - L1MEc LINE L1 -6195 345 27 27 0 0 0 chr2 184441754 184441781 -66246073 + AT_rich Low_complexity Low_complexity 1 27 0 2169 111 3 0 chr2 184441781 184442070 -66245784 - AluSx SINE Alu -22 290 1 545 189 23 17 chr2 184442117 184442292 -66245562 + L1ME LINE L1 973 1148 -5248 5741 50 151 7 chr2 184443227 184444091 -66243763 + L1P LINE L1 4 991 -5155 11778 26 0 0 chr2 184444191 184446344 -66241510 + L1PA2 LINE L1 4000 6152 -3 26 74 0 0 chr2 184446348 184446402 -66241452 + AT_rich Low_complexity Low_complexity 1 54 0 3548 153 42 8 chr2 184446863 184447759 -66240095 - L1MD1 LINE L1 0 6242 5254 26 0 0 0 chr2 184447766 184447792 -66240062 + AT_rich Low_complexity Low_complexity 1 26 0 1934 159 3 3 chr2 184448102 184448397 -66239457 - AluJo SINE Alu -17 295 1 25 51 0 0 chr2 184449821 184449860 -66237994 + AT_rich Low_complexity Low_complexity 1 39 0 319 243 108 54 chr2 184450025 184450136 -66237718 + MIR SINE MIR 96 212 -50 1292 226 7 39 chr2 184450190 184450495 -66237359 + AluJo SINE Alu 1 295 -17 213 352 74 28 chr2 184451053 184451161 -66236693 - L2 LINE L2 0 3272 3160 24 67 0 0 chr2 184451580 184451625 -66236229 + AT_rich Low_complexity Low_complexity 1 45 0 857 211 0 0 chr2 184452639 184452805 -66235049 - FRAM SINE Alu 0 166 1 220 306 65 0 chr2 184453072 184453134 -66234720 + L2 LINE L2 3144 3209 -63 21 36 0 0 chr2 184453546 184453574 -66234280 + AT_rich Low_complexity Low_complexity 1 28 0 429 242 96 73 chr2 184453757 184453935 -66233919 + MIR SINE MIR 81 262 0 2377 73 7 3 chr2 184453971 184454272 -66233582 - AluSq SINE Alu -11 302 1 262 277 202 0 chr2 184454508 184454602 -66233252 - L2 LINE L2 0 3313 3201 378 306 84 20 chr2 184455877 184456071 -66231783 + MIR SINE MIR 6 221 -41 461 157 59 10 chr2 184456224 184456326 -66231528 - MER106A DNA MER1_type 0 236 130 389 329 133 13 chr2 184456326 184456484 -66231370 - MIR3 SINE MIR -27 181 5 652 184 50 0 chr2 184457071 184457212 -66230642 + L1MA10 LINE L1 6180 6327 -7 484 174 209 26 chr2 184457290 184457405 -66230449 + FLAM_C SINE Alu 1 136 -7 1128 342 61 37 chr2 184457760 184458461 -66229393 + L2 LINE L2 1984 2701 -613 1835 132 35 57 chr2 184458464 184458616 -66229238 - L1MB8 LINE L1 -2 6176 6022 2130 110 10 0 chr2 184458616 184458907 -66228947 + AluSx SINE Alu 2 295 -17 1835 132 35 57 chr2 184458907 184459155 -66228699 - L1MB8 LINE L1 -156 6022 5785 1735 149 0 0 chr2 184459299 184459560 -66228294 - AluSx SINE Alu 0 305 45 379 283 73 100 chr2 184459709 184459905 -66227949 + L1MC4a LINE L1 5664 5864 -1944 2553 103 8 24 chr2 184459905 184460285 -66227569 - THE1C LTR MaLR -1 374 1 9610 113 57 28 chr2 184460285 184461820 -66226034 - THE1C-int LTR MaLR 0 1580 1 2404 95 87 3 chr2 184461820 184462166 -66225688 - THE1C LTR MaLR 0 375 1 379 283 73 100 chr2 184462166 184462338 -66225516 + L1MC4a LINE L1 5861 6024 -1784 2017 135 7 7 chr2 184462412 184462708 -66225146 + AluSx SINE Alu 1 296 -16 1354 97 46 80 chr2 184462795 184463033 -66224821 - MER30 DNA MER1_type 0 230 1 293 254 0 0 chr2 184464130 184464193 -66223661 - L2 LINE L2 -224 3048 2986 1023 167 13 86 chr2 184464193 184464426 -66223428 + MER20 DNA MER1_type 3 218 -1 2126 121 3 3 chr2 184464431 184464736 -66223118 + AluSp SINE Alu 1 305 -8 2099 211 42 20 chr2 184464920 184465464 -66222390 - L1MD3 LINE L1 -746 7249 6694 2094 132 3 23 chr2 184465675 184465985 -66221869 - AluJo SINE Alu -8 304 1 22 35 0 0 chr2 184466161 184466190 -66221664 + AT_rich Low_complexity Low_complexity 1 29 0 777 145 68 0 chr2 184466196 184466313 -66221541 + FLAM_C SINE Alu 1 125 -8 3678 153 47 30 chr2 184466383 184467146 -66220708 - L1MB4 LINE L1 -12 6168 5393 2362 96 0 0 chr2 184467172 184467475 -66220379 - AluSx SINE Alu -9 303 1 1374 198 23 45 chr2 184467519 184467873 -66219981 - L1MB7 LINE L1 -49 6135 5790 2177 119 0 0 chr2 184468229 184468532 -66219322 - AluSx SINE Alu -9 303 1 2271 115 0 13 chr2 184469202 184469516 -66218338 - AluSg SINE Alu 0 310 1 21 36 0 0 chr2 184470582 184470610 -66217244 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 184470715 184470736 -66217118 + AT_rich Low_complexity Low_complexity 1 21 0 2365 95 0 3 chr2 184470866 184471172 -66216682 + AluSg SINE Alu 1 305 -5 822 204 0 12 chr2 184471321 184471493 -66216361 + MER58B DNA MER1_type 170 339 -2 242 348 44 22 chr2 184471645 184471780 -66216074 + L3b LINE CR1 1352 1489 -94 286 262 47 0 chr2 184472605 184472692 -66215162 + MIR SINE MIR 84 147 -61 1984 134 0 26 chr2 184473041 184473354 -66214500 - AluJb SINE Alu -7 305 1 2406 93 0 3 chr2 184474061 184474373 -66213481 - AluY SINE Alu 0 311 1 1847 157 10 10 chr2 184474728 184475021 -66212833 + AluJb SINE Alu 1 293 -19 601 240 141 60 chr2 184475029 184475255 -66212599 + L1ME LINE L1 5284 5490 -631 1901 162 7 7 chr2 184475255 184475563 -66212291 - AluJb SINE Alu -4 308 1 601 240 141 60 chr2 184475563 184475769 -66212085 + L1ME LINE L1 5490 5751 -370 588 276 172 52 chr2 184475792 184476118 -66211736 - L2 LINE L2 -4 3309 2945 306 259 0 5 chr2 184476253 184476337 -66211517 + MIR SINE MIR 64 146 -62 246 62 0 0 chr2 184476986 184477018 -66210836 + (TG)n Simple_repeat Simple_repeat 2 33 0 23 0 0 0 chr2 184477349 184477372 -66210482 + AT_rich Low_complexity Low_complexity 1 23 0 603 271 64 31 chr2 184477925 184478007 -66209847 + L1ME4a LINE L1 5642 5720 -401 1891 127 4 0 chr2 184478007 184478274 -66209580 + AluSx SINE Alu 1 268 -44 603 271 64 31 chr2 184478274 184478644 -66209210 + L1ME4a LINE L1 5720 6109 -12 23 0 0 0 chr2 184479397 184479420 -66208434 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 184479517 184479552 -66208302 + AT_rich Low_complexity Low_complexity 1 35 0 1246 159 70 8 chr2 184479587 184479845 -66208009 - L1MB8 LINE L1 -2 6176 5903 2158 92 0 3 chr2 184480514 184480796 -66207058 + AluSg SINE Alu 1 281 -29 23 33 0 0 chr2 184480859 184480889 -66206965 + AT_rich Low_complexity Low_complexity 1 30 0 695 150 58 0 chr2 184481694 184481814 -66206040 - AluJb SINE Alu -185 127 1 330 26 0 0 chr2 184482036 184482075 -66205779 + (TG)n Simple_repeat Simple_repeat 1 39 0 24 32 0 0 chr2 184483013 184483044 -66204810 + AT_rich Low_complexity Low_complexity 1 31 0 11217 35 5 1 chr2 184483283 184484730 -66203124 - L1P LINE L1 -1470 4676 3225 2964 118 11 9 chr2 184484830 184485287 -66202567 + L1MC1 LINE L1 5867 6324 -9 1983 125 7 0 chr2 184485288 184485576 -66202278 - AluSg1 SINE Alu -19 290 1 1810 166 3 7 chr2 184485600 184485908 -66201946 + AluJb SINE Alu 1 307 -5 27 29 0 0 chr2 184485960 184485994 -66201860 + AT_rich Low_complexity Low_complexity 1 34 0 1665 246 87 68 chr2 184486705 184487557 -66200297 + L1MC4a LINE L1 5266 6133 -1675 379 279 115 24 chr2 184487630 184487795 -66200059 - MIR SINE MIR -51 211 32 24 53 0 0 chr2 184487809 184487847 -66200007 + AT_rich Low_complexity Low_complexity 1 38 0 904 75 0 0 chr2 184488150 184488270 -66199584 + AluY SINE Alu 192 311 0 1260 118 47 28 chr2 184488279 184488534 -66199320 + L1MA8 LINE L1 6015 6274 -17 1642 164 3 49 chr2 184488734 184489058 -66198796 - AluJo SINE Alu -3 309 1 682 260 59 4 chr2 184489249 184489503 -66198351 - L1MEc LINE L1 -4122 2274 2007 919 127 0 8 chr2 184489503 184489637 -66198217 - MER46A DNA MER2_type -5 231 99 428 213 90 33 chr2 184489943 184490065 -66197789 + MLT1I LTR MaLR 2 130 -279 269 291 12 0 chr2 184490174 184490260 -66197594 + MLT1I LTR MaLR 323 409 0 726 291 146 56 chr2 184490704 184491226 -66196628 + MLT1L LTR MaLR 47 615 0 1325 158 0 110 chr2 184491324 184491659 -66196195 + AluJo SINE Alu 1 298 -14 1975 129 0 10 chr2 184491881 184492192 -66195662 + AluJb SINE Alu 1 308 -4 267 255 94 9 chr2 184492361 184492467 -66195387 + L2 LINE L2 3115 3229 -84 347 90 82 0 chr2 184492506 184492628 -66195226 + (TA)n Simple_repeat Simple_repeat 2 133 0 721 243 95 33 chr2 184493609 184493852 -66194002 + MIR SINE MIR 3 260 -2 905 169 11 49 chr2 184493890 184494073 -66193781 - MER20 DNA MER1_type 0 219 44 2257 101 0 0 chr2 184494299 184494605 -66193249 - AluSq SINE Alu -7 306 1 25 51 0 0 chr2 184496557 184496596 -66191258 + AT_rich Low_complexity Low_complexity 1 39 0 23 68 0 0 chr2 184497755 184497799 -66190055 + AT_rich Low_complexity Low_complexity 1 44 0 2281 98 0 0 chr2 184498072 184498378 -66189476 - AluSg SINE Alu -4 306 1 212 189 0 0 chr2 184498507 184498544 -66189310 + A-rich Low_complexity Low_complexity 1 37 0 252 122 0 0 chr2 184498581 184498622 -66189232 + (TCC)n Simple_repeat Simple_repeat 2 42 0 204 219 0 0 chr2 184498665 184498706 -66189148 + A-rich Low_complexity Low_complexity 3 43 0 2195 82 3 10 chr2 184499747 184500053 -66187801 + AluSx SINE Alu 1 304 -8 1046 104 7 0 chr2 184500053 184500217 -66187637 + AluSg/x SINE Alu 135 299 0 1666 207 68 41 chr2 184500217 184500656 -66187198 - MLT1D LTR MaLR -54 451 1 803 168 0 24 chr2 184501554 184501679 -66186175 - FLAM_C SINE Alu -20 123 2 27 0 0 0 chr2 184502018 184502045 -66185809 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr2 184506997 184507018 -66180836 + GC_rich Low_complexity Low_complexity 1 21 0 336 48 0 0 chr2 184510163 184510205 -66177649 + (CCG)n Simple_repeat Simple_repeat 2 43 0 235 258 0 0 chr2 184510688 184510750 -66177104 + (CGG)n Simple_repeat Simple_repeat 1 62 0 21 0 0 0 chr2 184514544 184514565 -66173289 + AT_rich Low_complexity Low_complexity 1 21 0 236 69 35 35 chr2 184514614 184514672 -66173182 + (GAGAA)n Simple_repeat Simple_repeat 4 61 0 215 220 20 0 chr2 184515149 184515199 -66172655 + C-rich Low_complexity Low_complexity 3 53 0 221 81 0 27 chr2 184516370 184516407 -66171447 + (GGGTG)n Simple_repeat Simple_repeat 2 37 0 204 40 0 0 chr2 184517105 184517130 -66170724 + (T)n Simple_repeat Simple_repeat 1 25 0 210 71 0 0 chr2 184519052 184519080 -66168774 + (CCCCCG)n Simple_repeat Simple_repeat 4 31 0 297 75 0 0 chr2 184519403 184519443 -66168411 + (TCCC)n Simple_repeat Simple_repeat 2 41 0 2110 91 3 3 chr2 184522097 184522393 -66165461 - AluSg SINE Alu -14 296 1 339 281 81 77 chr2 184522498 184522719 -66165135 + MIR SINE MIR 15 236 -26 538 273 23 0 chr2 184523012 184523140 -66164714 - MIR SINE MIR 0 262 132 1682 154 3 17 chr2 184523161 184523460 -66164394 + AluJb SINE Alu 2 296 -16 1365 209 49 53 chr2 184523469 184523937 -66163917 - L1MC5 LINE L1 -61 7900 7435 907 205 0 0 chr2 184523967 184524133 -66163721 - FAM SINE Alu -9 166 1 198 0 0 0 chr2 184524157 184524179 -66163675 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1658 136 7 28 chr2 184524181 184524467 -66163387 - AluJb SINE Alu -30 282 3 2104 98 14 0 chr2 184525525 184525821 -66162033 + AluSx SINE Alu 1 300 -12 2142 95 3 26 chr2 184526003 184526308 -66161546 - AluSg SINE Alu -12 298 1 204 179 0 0 chr2 184526960 184526999 -66160855 + (CATA)n Simple_repeat Simple_repeat 2 40 0 490 191 8 40 chr2 184527470 184527610 -66160244 - L1MC4 LINE L1 -2 8039 7878 2198 116 0 0 chr2 184527700 184528003 -66159851 + AluSx SINE Alu 1 303 -9 1733 258 64 40 chr2 184528364 184528614 -66159240 - MLT1G1 LTR MaLR 0 595 353 2018 127 3 0 chr2 184528614 184528905 -66158949 - AluSq SINE Alu -20 293 2 1733 258 64 40 chr2 184528905 184529231 -66158623 - MLT1G1 LTR MaLR -242 353 5 2077 122 0 31 chr2 184529437 184529758 -66158096 - AluSx SINE Alu -1 311 1 1975 122 14 7 chr2 184530550 184530844 -66157010 - AluJb SINE Alu -16 296 1 1323 192 36 45 chr2 184530994 184531302 -66156552 + AluJo SINE Alu 1 305 -7 1635 81 0 0 chr2 184531629 184531839 -66156015 - L1PB1 LINE L1 -1 6150 5941 903 273 53 23 chr2 184531885 184532131 -66155723 - MLT1J LTR MaLR -202 309 53 1232 213 10 104 chr2 184532131 184532534 -66155320 + MLT1A1 LTR MaLR 1 365 0 903 273 53 23 chr2 184532534 184532551 -66155303 - MLT1J LTR MaLR -458 53 38 267 239 55 103 chr2 184532752 184532886 -66154968 + L1MC5 LINE L1 7650 7789 -172 1651 168 7 26 chr2 184532886 184533217 -66154637 + AluJb SINE Alu 1 312 0 267 239 55 103 chr2 184533217 184533284 -66154570 + L1MC5 LINE L1 7789 7837 -124 1683 177 0 10 chr2 184533284 184533578 -66154276 + AluJb SINE Alu 1 291 -21 267 239 55 103 chr2 184533578 184533647 -66154207 + L1MC5 LINE L1 7837 7908 -53 2239 95 0 3 chr2 184533648 184533954 -66153900 - AluY SINE Alu -6 305 1 348 284 28 57 chr2 184534031 184534172 -66153682 + MIR SINE MIR 81 217 -45 367 313 10 0 chr2 184534233 184534332 -66153522 + L2 LINE L2 3208 3307 -6 295 270 135 0 chr2 184534379 184534490 -66153364 - MIR3 SINE MIR -23 185 60 761 221 7 0 chr2 184534766 184534906 -66152948 - MER58A DNA MER1_type -54 170 30 832 159 16 179 chr2 184535033 184535102 -66152752 - LTR37A LTR ERV1 -3 423 344 2139 132 7 0 chr2 184535102 184535398 -66152456 + AluSx SINE Alu 1 298 -14 832 159 16 179 chr2 184535398 184535672 -66152182 - LTR37A LTR ERV1 -82 344 144 2137 141 0 0 chr2 184535672 184535970 -66151884 - AluSx SINE Alu -14 298 1 832 159 16 179 chr2 184535970 184536007 -66151847 - LTR37A LTR ERV1 -282 144 103 1007 103 0 0 chr2 184536145 184536305 -66151549 - AluSg/x SINE Alu 0 305 146 27 49 0 0 chr2 184536396 184536437 -66151417 + AT_rich Low_complexity Low_complexity 1 41 0 304 252 47 0 chr2 184536495 184536602 -66151252 + HAL1 LINE L1 1379 1490 -1017 301 369 0 0 chr2 184537253 184537421 -66150433 + (TGG)n Simple_repeat Simple_repeat 1 168 0 419 298 25 10 chr2 184538326 184538524 -66149330 + HAL1 LINE L1 1475 1675 -832 4664 246 45 57 chr2 184538562 184539444 -66148410 + L1MEc LINE L1 40 931 -5465 1620 156 85 4 chr2 184539444 184539714 -66148140 + AluJb SINE Alu 1 292 -20 4664 246 45 57 chr2 184539714 184539775 -66148079 + L1MEc LINE L1 931 991 -5405 1042 214 9 5 chr2 184539775 184539990 -66147864 + MER20 DNA MER1_type 2 217 -2 4664 246 45 57 chr2 184539990 184540485 -66147369 + L1MEc LINE L1 991 1490 -4906 2353 97 0 0 chr2 184540485 184540784 -66147070 + AluSx SINE Alu 1 299 -13 4664 246 45 57 chr2 184540784 184540955 -66146899 + L1MEc LINE L1 1490 1662 -4734 820 165 0 0 chr2 184540955 184541082 -66146772 + FLAM_A SINE Alu 1 127 -6 4664 246 45 57 chr2 184541082 184541309 -66146545 + L1MEc LINE L1 1662 1857 -4539 2372 94 3 0 chr2 184541309 184541616 -66146238 + AluY SINE Alu 1 308 -3 5357 141 22 79 chr2 184541628 184542495 -66145359 + L1MA5 LINE L1 4149 5064 -1236 2258 93 3 0 chr2 184542495 184542784 -66145070 + AluSp SINE Alu 1 290 -23 5357 141 22 79 chr2 184542784 184542827 -66145027 + L1MA5 LINE L1 5064 5108 -1192 2084 103 42 39 chr2 184542827 184543139 -66144715 + AluSq SINE Alu 1 313 0 5357 141 22 79 chr2 184543139 184543668 -66144186 + L1MA5 LINE L1 5108 5666 -634 2306 62 3 3 chr2 184543668 184543957 -66143897 - AluY SINE Alu -20 291 3 5357 141 22 79 chr2 184543957 184544051 -66143803 + L1MA5 LINE L1 5666 5576 -724 2233 115 0 3 chr2 184544051 184544364 -66143490 + AluSx SINE Alu 1 312 0 5357 141 22 79 chr2 184544364 184544562 -66143292 + L1MA5 LINE L1 5575 5783 -517 693 90 0 0 chr2 184544564 184544653 -66143201 + AluSp SINE Alu 1 89 -223 1477 82 0 0 chr2 184544659 184544843 -66143011 + AluSp SINE Alu 130 313 0 1016 99 0 0 chr2 184544852 184544994 -66142860 + AluSc SINE Alu 165 306 -3 2366 93 0 3 chr2 184545005 184545307 -66142547 + AluSq SINE Alu 1 301 -12 2923 157 12 4 chr2 184545310 184545826 -66142028 + L1MA5 LINE L1 5779 6298 -2 315 155 155 24 chr2 184545855 184545939 -66141915 + L1MEc LINE L1 1850 1944 -4452 478 188 0 0 chr2 184546129 184546214 -66141640 + AluJ/FLAM SINE Alu 1 85 -227 817 231 0 0 chr2 184546338 184546498 -66141356 + FRAM SINE Alu 1 160 -16 1895 146 7 0 chr2 184547627 184547902 -66139952 - AluSx SINE Alu -22 290 14 2064 149 0 0 chr2 184547920 184548215 -66139639 + AluSx SINE Alu 1 295 -17 862 258 70 21 chr2 184549144 184549483 -66138371 - MLT1I LTR MaLR -17 392 66 2085 119 0 20 chr2 184550174 184550476 -66137378 - AluSx SINE Alu -16 296 1 2229 104 0 3 chr2 184550497 184550784 -66137070 - AluSx SINE Alu -26 286 1 1711 176 25 0 chr2 184550791 184551075 -66136779 - AluJo SINE Alu -21 291 1 2258 109 0 0 chr2 184551110 184551413 -66136441 - AluSx SINE Alu -9 303 1 899 171 39 84 chr2 184551990 184552300 -66135554 + L1MC5 LINE L1 6727 7022 -939 252 324 128 10 chr2 184552813 184552915 -66134939 + MIR SINE MIR 1 114 -148 1374 162 0 60 chr2 184552933 184553199 -66134655 - AluJo SINE Alu -36 276 27 260 298 58 8 chr2 184553199 184553320 -66134534 + MIR SINE MIR 123 249 -13 3865 139 28 36 chr2 184553516 184554265 -66133589 + Tigger2 DNA MER2_type 2 744 -1974 1021 137 124 64 chr2 184554326 184554559 -66133295 + Tigger2 DNA MER2_type 2472 2718 0 887 158 0 0 chr2 184555039 184555172 -66132682 - FLAM_C SINE Alu 0 133 1 1481 95 11 0 chr2 184555371 184555560 -66132294 - AluSg/x SINE Alu -15 297 107 890 221 12 0 chr2 184555743 184555915 -66131939 - FAM SINE Alu -1 174 1 1586 187 20 23 chr2 184556556 184556861 -66130993 - AluJo SINE Alu -6 306 3 889 119 8 15 chr2 184556902 184557036 -66130818 + FLAM_C SINE Alu 1 133 0 1701 178 37 7 chr2 184557165 184557463 -66130391 - AluSx SINE Alu -5 307 1 2073 138 0 0 chr2 184557591 184557889 -66129965 + AluSx SINE Alu 1 298 -14 395 377 73 25 chr2 184557935 184558333 -66129521 + L2 LINE L2 2806 3222 -50 21 36 0 0 chr2 184558507 184558535 -66129319 + AT_rich Low_complexity Low_complexity 1 28 0 254 211 105 26 chr2 184558835 184558949 -66128905 + MER104 DNA Tc2 1 123 -57 382 323 0 19 chr2 184559408 184559569 -66128285 + L2 LINE L2 2338 2495 -819 414 114 71 0 chr2 184559802 184559872 -66127982 + MADE1 DNA Mariner 4 78 -2 393 200 111 22 chr2 184559939 184560074 -66127780 - MER5C DNA MER1_type -128 196 50 337 111 79 0 chr2 184560586 184560649 -66127205 - Tigger4(Zombi) DNA MER2_type -79 2652 2585 1813 148 0 46 chr2 184560649 184560786 -66127068 + AluJo SINE Alu 1 143 -169 2546 67 0 13 chr2 184560786 184561101 -66126753 + AluY SINE Alu 1 311 0 1813 148 0 46 chr2 184561101 184561267 -66126587 + AluJo SINE Alu 143 290 -22 660 138 49 0 chr2 184561271 184561394 -66126460 + L1MA5 LINE L1 6153 6281 -19 2256 110 0 3 chr2 184561396 184561686 -66126168 - AluSx SINE Alu -23 289 1 2244 117 7 0 chr2 184561817 184562125 -66125729 - AluSq SINE Alu -3 310 1 689 156 43 28 chr2 184562774 184562915 -66124939 - FLAM_C SINE Alu 0 143 1 392 264 57 14 chr2 184563005 184563145 -66124709 - MER103 DNA DNA 0 166 21 2438 86 0 0 chr2 184563420 184563723 -66124131 + AluSc SINE Alu 1 303 -6 286 301 49 16 chr2 184564164 184564287 -66123567 - MIR SINE MIR -17 245 119 270 0 0 0 chr2 184564316 184564346 -66123508 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2123 93 4 4 chr2 184564349 184564627 -66123227 - AluSx SINE Alu -34 278 1 595 135 0 0 chr2 184564797 184564893 -66122961 + L1MC/D LINE L1 5447 5542 -791 3808 158 11 32 chr2 184565029 184565189 -66122665 - Tigger2 DNA MER2_type -1967 751 589 1926 143 6 25 chr2 184565189 184565503 -66122351 - AluJo SINE Alu -4 308 1 3808 158 11 32 chr2 184565503 184566099 -66121755 - Tigger2 DNA MER2_type -2129 589 11 293 233 37 43 chr2 184566219 184566357 -66121497 - L1ME1 LINE L1 -24 6142 6014 2290 101 7 0 chr2 184566453 184566750 -66121104 - AluSx SINE Alu -13 299 1 2205 120 0 0 chr2 184567166 184567467 -66120387 - AluSx SINE Alu -11 301 1 499 106 12 0 chr2 184567564 184567649 -66120205 - L1MB3 LINE L1 -7 6176 6091 5736 98 36 3 chr2 184568543 184569460 -66118394 + Tigger3b DNA MER2_type 285 1231 0 578 96 90 90 chr2 184569524 184569680 -66118174 - MER33 DNA MER1_type 0 363 208 237 143 0 198 chr2 184569684 184569775 -66118079 - MER33 DNA MER1_type -247 77 5 204 40 0 0 chr2 184570287 184570312 -66117542 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 234 0 0 0 chr2 184570311 184570337 -66117517 + (TG)n Simple_repeat Simple_repeat 2 27 0 536 240 0 56 chr2 184571123 184571248 -66116606 - FLAM_A SINE Alu -23 119 2 547 192 10 0 chr2 184572308 184572412 -66115442 + MER8 DNA MER2_type 134 238 -1 724 220 0 0 chr2 184574016 184574148 -66113706 - FLAM_A SINE Alu -1 132 1 449 266 47 8 chr2 184575473 184575601 -66112253 - MIR SINE MIR -73 189 57 571 321 49 35 chr2 184575626 184575972 -66111882 - L1ME1 LINE L1 -210 5911 5561 1824 95 21 14 chr2 184575973 184576258 -66111596 - AluY SINE Alu -7 304 18 1753 142 11 4 chr2 184576735 184577009 -66110845 + AluJb SINE Alu 22 297 -15 25 0 0 0 chr2 184577334 184577359 -66110495 + AT_rich Low_complexity Low_complexity 1 25 0 2217 89 0 7 chr2 184577359 184577652 -66110202 + AluSq SINE Alu 2 292 -21 579 51 0 0 chr2 184577652 184577731 -66110123 + (TA)n Simple_repeat Simple_repeat 1 79 0 2196 119 65 6 chr2 184577857 184578211 -66109643 + THE1C LTR MaLR 1 375 0 201 138 0 0 chr2 184579364 184579393 -66108461 - MIR SINE MIR -160 102 74 2078 107 10 13 chr2 184579790 184580089 -66107765 + AluSx SINE Alu 1 298 -14 2172 109 3 0 chr2 184581246 184581530 -66106324 + AluSq SINE Alu 3 287 -26 1489 244 106 64 chr2 184581873 184582702 -66105152 + L1ME LINE L1 36 829 -5241 450 0 0 0 chr2 184582702 184582752 -66105102 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 1489 244 106 64 chr2 184582752 184582910 -66104944 + L1ME LINE L1 829 973 -5097 2102 99 46 3 chr2 184582910 184583193 -66104661 - AluSg SINE Alu -15 295 1 1489 244 106 64 chr2 184583193 184583297 -66104557 + L1ME LINE L1 973 1071 -4999 4405 187 8 33 chr2 184583584 184584845 -66103009 - L1MA10 LINE L1 -83 6251 5019 3345 164 12 41 chr2 184584914 184585421 -66102433 + L1 LINE L1 4118 4597 -1549 2152 124 3 0 chr2 184585421 184585720 -66102134 + AluSx SINE Alu 1 300 -12 3345 164 12 41 chr2 184585720 184585970 -66101884 + L1 LINE L1 4597 4853 -1293 774 184 0 0 chr2 184586062 184586203 -66101651 + L1 LINE L1 4854 4994 -1152 1759 151 39 18 chr2 184586545 184586707 -66101147 - AluSx SINE Alu -21 291 119 405 0 0 0 chr2 184586707 184586752 -66101102 + (TG)n Simple_repeat Simple_repeat 2 46 0 1759 151 39 18 chr2 184586752 184586874 -66100980 - AluSx SINE Alu -193 119 1 25399 47 3 0 chr2 184586896 184591000 -66096854 - L1PA5 LINE L1 -8 6146 2033 1749 184 3 3 chr2 184591404 184591692 -66096162 + AluJb SINE Alu 5 292 -20 16357 33 0 1 chr2 184592121 184594209 -66093645 - L1P LINE L1 -2902 3244 1158 2100 125 38 46 chr2 184594574 184594967 -66092887 - MLT1B LTR MaLR 0 390 1 288 354 54 48 chr2 184595026 184595359 -66092495 - L2 LINE L2 -431 2883 2549 211 217 0 0 chr2 184596687 184596733 -66091121 + A-rich Low_complexity Low_complexity 1 46 0 946 139 28 0 chr2 184596783 184596963 -66090891 + L1MB7 LINE L1 5680 5864 -320 1275 182 44 43 chr2 184596972 184597336 -66090518 + MLT2B1 LTR ERVL 1 362 -52 345 234 170 48 chr2 184597407 184597488 -66090366 - L1MC5 LINE L1 -741 7220 7150 2156 123 7 0 chr2 184597488 184597796 -66090058 - AluSx SINE Alu -2 310 1 345 234 170 48 chr2 184597796 184597902 -66089952 - L1MC5 LINE L1 -811 7150 7010 1997 142 46 3 chr2 184597927 184598273 -66089581 + MLT1B LTR MaLR 14 374 -16 376 297 16 16 chr2 184598329 184598521 -66089333 - L1MC4 LINE L1 -962 7080 6889 3455 159 31 43 chr2 184598563 184598693 -66089161 - MER44D DNA MER2_type -1882 705 575 660 89 0 20 chr2 184598693 184598794 -66089060 + HY3 scRNA scRNA 1 99 -2 3455 159 31 43 chr2 184598794 184598899 -66088955 - MER44D DNA MER2_type -2012 575 470 2466 61 0 26 chr2 184598899 184599209 -66088645 + AluY SINE Alu 3 304 -7 3455 159 31 43 chr2 184599209 184599677 -66088177 - MER44D DNA MER2_type -2117 470 9 915 145 0 7 chr2 184599936 184600081 -66087773 - AluSg/x SINE Alu -14 298 155 196 263 10 101 chr2 184600311 184600410 -66087444 - L2 LINE L2 -242 3030 2941 1577 197 7 13 chr2 184601165 184601464 -66086390 + AluJo SINE Alu 1 297 -15 2195 104 17 3 chr2 184602910 184603209 -66084645 - AluSx SINE Alu -9 303 1 1690 178 65 41 chr2 184604852 184605269 -66082585 - MSTC LTR MaLR 0 428 2 552 311 134 45 chr2 184605916 184606431 -66081423 - L2 LINE L2 -1139 2175 1615 1992 127 3 10 chr2 184606920 184607228 -66080626 - AluSx SINE Alu -6 306 1 1540 151 23 0 chr2 184607258 184607516 -66080338 + AluSx SINE Alu 44 307 -5 326 280 42 17 chr2 184607532 184607650 -66080204 - HAL1b LINE L1 0 1348 1228 332 249 104 70 chr2 184607664 184607865 -66079989 - HAL1b LINE L1 -186 1162 955 2411 75 3 3 chr2 184607882 184608188 -66079666 - AluSp SINE Alu -7 306 1 461 339 76 30 chr2 184608572 184609006 -66078848 + L2 LINE L2 1942 2395 -919 336 315 103 60 chr2 184609006 184609390 -66078464 + L2 LINE L2 2684 3090 -223 598 204 211 4 chr2 184609574 184609839 -66078015 + MER113 DNA MER1_type? 104 423 -98 388 333 67 7 chr2 184610163 184610313 -66077541 - MIR SINE MIR -30 232 74 279 0 0 0 chr2 184610350 184610381 -66077473 + (TA)n Simple_repeat Simple_repeat 2 32 0 1746 157 75 0 chr2 184610381 184610662 -66077192 - AluJb SINE Alu -10 302 1 1538 184 25 14 chr2 184611234 184611511 -66076343 - AluJo SINE Alu -32 280 1 2305 110 3 0 chr2 184613679 184613980 -66073874 + AluSx SINE Alu 1 302 -10 23 0 0 0 chr2 184613980 184614003 -66073851 + AT_rich Low_complexity Low_complexity 1 23 0 305 321 12 0 chr2 184614065 184614149 -66073705 - LTR16C LTR ERVL -242 249 165 2060 116 0 7 chr2 184614264 184614556 -66073298 + AluSx SINE Alu 22 311 -1 2317 107 0 0 chr2 184615018 184615326 -66072528 - AluSg SINE Alu -2 308 1 1217 207 148 18 chr2 184615429 184615815 -66072039 - MLT1C LTR MaLR 0 467 32 3808 130 20 40 chr2 184616200 184616891 -66070963 + Tigger1 DNA MER2_type 1 677 -1741 180 0 0 0 chr2 184616896 184616916 -66070938 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 696 205 0 0 chr2 184616918 184617030 -66070824 - FLAM_A SINE Alu -30 112 1 10451 111 25 12 chr2 184617030 184617936 -66069918 + Tigger1 DNA MER2_type 664 1602 -816 2208 108 3 16 chr2 184617936 184618241 -66069613 + AluSg SINE Alu 1 301 -9 10451 111 25 12 chr2 184618241 184619025 -66068829 + Tigger1 DNA MER2_type 1602 2375 -43 316 150 167 0 chr2 184619035 184619095 -66068759 + Tigger1 DNA MER2_type 2345 2414 -4 195 324 232 33 chr2 184619248 184619640 -66068214 + L2 LINE L2 2388 2857 -457 2352 82 3 0 chr2 184619727 184620031 -66067823 - AluY SINE Alu -6 305 1 823 147 19 0 chr2 184620101 184620257 -66067597 - L1MB4 LINE L1 0 6180 6022 238 160 0 0 chr2 184620259 184620309 -66067545 + L1MC4 LINE L1 7993 8042 0 911 134 70 0 chr2 184620441 184620613 -66067241 + L1MA6 LINE L1 6117 6300 0 1609 167 47 30 chr2 184620654 184621119 -66066735 + L1MB5 LINE L1 5577 6146 -28 282 192 55 0 chr2 184621137 184621210 -66066644 + L1M4 LINE L1 2176 2252 -3894 262 125 250 0 chr2 184621210 184621266 -66066588 - Tigger5 DNA MER2_type 0 2323 2254 1696 160 57 0 chr2 184621266 184621547 -66066307 + AluSx SINE Alu 1 297 -15 1179 234 82 30 chr2 184621709 184622269 -66065585 + L1M4 LINE L1 2255 2843 -3303 189 333 24 24 chr2 184622493 184622577 -66065277 + MER5B DNA MER1_type 73 156 -22 1946 185 22 16 chr2 184623132 184623506 -66064348 - L1M4 LINE L1 -494 5690 5319 2261 104 3 7 chr2 184623506 184623805 -66064049 + AluSp SINE Alu 1 298 -15 1946 185 22 16 chr2 184623805 184624193 -66063661 - L1M4 LINE L1 -865 5319 4921 1358 97 11 0 chr2 184624212 184624397 -66063457 - AluY SINE Alu -6 305 119 2522 77 0 3 chr2 184626782 184627094 -66060760 - AluSq SINE Alu -2 311 1 1709 205 72 8 chr2 184627156 184627547 -66060307 + MLT1F1 LTR MaLR 1 416 -151 289 278 161 27 chr2 184627755 184627978 -66059876 + L2 LINE L2 1448 1700 -1614 273 29 0 0 chr2 184628258 184628292 -66059562 + (TA)n Simple_repeat Simple_repeat 2 35 0 1501 189 60 11 chr2 184628324 184628605 -66059249 + AluJo SINE Alu 1 295 -17 863 142 0 0 chr2 184628753 184628873 -66058981 + AluJb SINE Alu 1 120 -192 441 83 36 0 chr2 184628873 184628957 -66058897 + (CA)n Simple_repeat Simple_repeat 1 87 0 1073 139 6 23 chr2 184628959 184629132 -66058722 + AluJb SINE Alu 132 301 -11 2255 121 0 0 chr2 184629208 184629234 -66058620 - AluSx SINE Alu -6 306 281 234 0 0 0 chr2 184629234 184629260 -66058594 + (TG)n Simple_repeat Simple_repeat 1 26 0 2255 121 0 0 chr2 184629260 184629539 -66058315 - AluSx SINE Alu -30 282 1 1657 196 66 47 chr2 184629611 184630186 -66057668 + L1MB4 LINE L1 4367 4952 -1194 2025 124 0 3 chr2 184630261 184630573 -66057281 + AluSx SINE Alu 2 312 0 1877 85 0 0 chr2 184630821 184631056 -66056798 + AluY SINE Alu 65 299 -12 966 189 6 0 chr2 184631227 184631396 -66056458 - FRAM SINE Alu -6 170 1 2316 144 23 28 chr2 184631569 184632005 -66055849 + L1MB4 LINE L1 5741 6174 -6 438 293 116 0 chr2 184632029 184632210 -66055644 + MIR SINE MIR 61 262 0 1272 166 203 0 chr2 184632355 184632596 -66055258 - AluJo SINE Alu -12 290 1 1988 106 64 0 chr2 184632761 184633044 -66054810 - AluSx SINE Alu -11 301 1 564 99 0 0 chr2 184633224 184633305 -66054549 - Alu SINE Alu -5 305 225 1211 45 0 13 chr2 184633860 184634017 -66053837 + L1PA4 LINE L1 5996 6150 -5 1931 236 107 21 chr2 184634584 184635403 -66052451 - L1MEc LINE L1 -882 5333 4444 * 2338 235 50 32 chr2 184635394 184635920 -66051934 - L1MEc LINE L1 -2113 4102 3550 210 71 0 0 chr2 184635920 184635948 -66051906 + (TG)n Simple_repeat Simple_repeat 1 28 0 2338 235 50 32 chr2 184635948 184636336 -66051518 - L1MEc LINE L1 -2665 3550 3171 2642 136 31 14 chr2 184636798 184637217 -66050637 - MSTB LTR MaLR 0 426 1 2673 245 78 51 chr2 184638225 184639039 -66048815 - L1MEc LINE L1 -3038 3177 2387 1501 199 7 24 chr2 184639039 184639336 -66048518 - AluJo SINE Alu -14 298 7 2673 245 78 51 chr2 184639336 184639698 -66048156 - L1MEc LINE L1 -3828 2387 2036 1794 51 0 0 chr2 184639698 184639914 -66047940 - AluY SINE Alu -4 307 92 2673 245 78 51 chr2 184639914 184640048 -66047806 - L1MEc LINE L1 -4179 2036 1907 430 143 13 0 chr2 184640048 184640125 -66047729 - L1MB5 LINE L1 -6 6168 6091 2673 245 78 51 chr2 184640125 184640340 -66047514 - L1MEc LINE L1 -4308 1907 1665 180 0 0 0 chr2 184640451 184640471 -66047383 + (A)n Simple_repeat Simple_repeat 1 20 0 2393 101 0 0 chr2 184640687 184640993 -66046861 + AluSx SINE Alu 4 309 -3 440 174 22 11 chr2 184641316 184641408 -66046446 - L1MD3 LINE L1 -1 7994 7902 517 206 39 0 chr2 184641420 184641522 -66046332 - MER81 DNA DNA -8 106 1 1154 202 32 12 chr2 184641523 184641770 -66046084 - L1MD3 LINE L1 -100 7895 7644 241 247 39 13 chr2 184641770 184641847 -66046007 - Tigger7 DNA MER2_type 0 2487 2409 450 53 0 0 chr2 184642313 184642370 -66045484 + (CATA)n Simple_repeat Simple_repeat 2 58 0 1883 114 18 14 chr2 184643645 184643925 -66043929 + AluJb SINE Alu 6 286 -26 614 191 90 73 chr2 184644031 184644209 -66043645 + MIR SINE MIR 17 197 -65 205 259 35 0 chr2 184644429 184644487 -66043367 + L2 LINE L2 3211 3270 -2 380 158 95 32 chr2 184644785 184644880 -66042974 + MER112 DNA MER1_type 154 254 -6 808 102 0 0 chr2 184646212 184646320 -66041534 + MLT1C LTR MaLR 1 108 -359 962 231 80 0 chr2 184646320 184646558 -66041296 - Tigger2 DNA MER2_type 0 2718 2462 290 225 28 0 chr2 184646625 184646696 -66041158 - Tigger2 DNA MER2_type -1974 744 672 307 311 22 7 chr2 184646883 184647018 -66040836 + L1ME4a LINE L1 5966 6102 -19 1775 153 41 3 chr2 184647427 184647722 -66040132 - AluJo SINE Alu -6 306 1 24 32 0 0 chr2 184647738 184647769 -66040085 + AT_rich Low_complexity Low_complexity 1 31 0 330 300 185 0 chr2 184647929 184648059 -66039795 - L2 LINE L2 -2 3270 3117 812 112 0 0 chr2 184648942 184649049 -66038805 - AluSp SINE Alu -201 112 6 2423 79 13 0 chr2 184649053 184649358 -66038496 - AluSq SINE Alu -4 309 1 236 305 195 20 chr2 184649446 184649748 -66038106 - L2 LINE L2 -1209 2105 1751 352 159 250 61 chr2 184649858 184649990 -66037864 + MER5B DNA MER1_type 22 178 0 180 281 200 19 chr2 184650003 184650163 -66037691 - L2 LINE L2 -1767 1547 1359 22 0 0 0 chr2 184650308 184650330 -66037524 + AT_rich Low_complexity Low_complexity 1 22 0 322 221 59 0 chr2 184651514 184651582 -66036272 - L2 LINE L2 0 3313 3242 577 286 38 11 chr2 184651705 184651890 -66035964 + MIR SINE MIR 8 197 -65 784 136 72 8 chr2 184653084 184653209 -66034645 + FLAM_C SINE Alu 1 133 0 2255 108 0 3 chr2 184653303 184653599 -66034255 - AluSq SINE Alu -18 295 1 2196 170 17 8 chr2 184653732 184654090 -66033764 - MLT1C LTR MaLR 0 467 107 3756 126 133 14 chr2 184654090 184654146 -66033708 + Tigger2 DNA MER2_type 1 49 -2669 2283 111 0 3 chr2 184654146 184654453 -66033401 - AluSg SINE Alu -4 306 1 3756 126 133 14 chr2 184654453 184655056 -66032798 + Tigger2 DNA MER2_type 49 739 -1979 704 269 156 3 chr2 184655383 184655665 -66032189 + MER102a DNA MER1_type 2 326 -4 266 225 217 8 chr2 184655731 184655851 -66032003 + L2 LINE L2 3165 3309 -4 264 190 86 103 chr2 184656034 184656150 -66031704 - MER103 DNA DNA -46 120 7 197 223 10 39 chr2 184657225 184657328 -66030526 + GA-rich Low_complexity Low_complexity 1 100 0 238 333 0 9 chr2 184657334 184657448 -66030406 + G-rich Low_complexity Low_complexity 5 117 0 954 243 107 50 chr2 184658113 184658329 -66029525 - L2 LINE L2 0 3313 3111 735 169 39 15 chr2 184658329 184658459 -66029395 - FLAM_C SINE Alu 0 133 1 954 243 107 50 chr2 184658459 184658795 -66029059 - L2 LINE L2 -202 3111 2710 835 196 88 5 chr2 184658798 184658992 -66028862 - L1PA16 LINE L1 0 6166 5957 355 250 115 27 chr2 184658992 184659140 -66028714 - L2 LINE L2 -599 2715 2555 324 246 156 18 chr2 184659263 184659487 -66028367 + MLT1K LTR MaLR 328 582 -6 869 247 42 46 chr2 184659556 184659839 -66028015 - L1M1 LINE L1 -5689 1876 1595 1998 117 0 0 chr2 184659852 184660116 -66027738 - AluSx SINE Alu -48 264 1 6388 126 16 18 chr2 184660119 184661120 -66026734 - L1MC1 LINE L1 -16 6317 5319 979 307 82 45 chr2 184661227 184661827 -66026027 + L1ME4a LINE L1 5483 6104 -17 374 215 50 50 chr2 184662785 184662906 -66024948 + MIR SINE MIR 70 190 -72 1424 80 5 5 chr2 184664434 184664621 -66023233 + AluSg SINE Alu 6 192 -118 2991 109 31 55 chr2 184664776 184665299 -66022555 + L1MA8 LINE L1 5782 6291 0 22 0 0 0 chr2 184665341 184665363 -66022491 + AT_rich Low_complexity Low_complexity 1 22 0 2255 90 3 0 chr2 184665470 184665759 -66022095 - AluSg SINE Alu -11 299 10 533 275 53 24 chr2 184665778 184665987 -66021867 + L1ME LINE L1 4453 4672 -1474 297 0 0 0 chr2 184665987 184666020 -66021834 + (CAA)n Simple_repeat Simple_repeat 2 34 0 533 275 53 24 chr2 184666020 184666057 -66021797 + L1ME LINE L1 4672 4706 -1440 823 221 0 18 chr2 184666059 184666222 -66021632 + FRAM SINE Alu 1 160 -16 1262 49 67 12 chr2 184666289 184666453 -66021401 - L1PA11 LINE L1 -2 6172 6000 23 0 0 0 chr2 184666741 184666764 -66021090 + AT_rich Low_complexity Low_complexity 1 23 0 441 278 113 28 chr2 184667202 184667450 -66020404 + L1ME LINE L1 5288 5556 -565 1226 166 0 0 chr2 184667462 184667672 -66020182 + AluJb SINE Alu 117 484 -35 897 186 45 6 chr2 184667672 184667828 -66020026 + FAM SINE Alu 1 162 -13 1226 166 0 0 chr2 184667828 184667865 -66019989 + AluJb SINE Alu 483 519 0 383 131 71 24 chr2 184667872 184667956 -66019898 + L1MC3 LINE L1 7347 7434 -351 1960 195 29 34 chr2 184667960 184668254 -66019600 + Tigger7 DNA MER2_type 1 294 -2193 2085 97 3 45 chr2 184668254 184668564 -66019290 - AluSc SINE Alu -12 297 1 1960 195 29 34 chr2 184668564 184668679 -66019175 + Tigger7 DNA MER2_type 294 408 -2079 498 275 7 14 chr2 184669346 184669488 -66018366 - MIR3 SINE MIR -2 206 66 39 47 0 35 chr2 184673747 184673833 -66014021 + GC_rich Low_complexity Low_complexity 1 83 0 234 0 0 0 chr2 184674046 184674072 -66013782 + (TCC)n Simple_repeat Simple_repeat 3 28 0 21 82 0 0 chr2 184674115 184674164 -66013690 + GC_rich Low_complexity Low_complexity 1 49 0 23 33 0 0 chr2 184674239 184674269 -66013585 + GC_rich Low_complexity Low_complexity 1 30 0 310 154 26 0 chr2 184674310 184674388 -66013466 + GA-rich Low_complexity Low_complexity 1 80 0 249 83 0 0 chr2 184674496 184674532 -66013322 + (CCG)n Simple_repeat Simple_repeat 3 38 0 204 178 44 0 chr2 184674600 184674645 -66013209 + G-rich Low_complexity Low_complexity 2 48 0 21 0 0 0 chr2 184676105 184676126 -66011728 + AT_rich Low_complexity Low_complexity 1 21 0 263 189 38 0 chr2 184676207 184676260 -66011594 + L2 LINE L2 3254 3308 -5 1760 121 6 84 chr2 184676645 184676977 -66010877 + AluSx SINE Alu 5 310 -2 1558 161 8 0 chr2 184677129 184677378 -66010476 + AluJb SINE Alu 47 297 -15 2330 90 0 19 chr2 184677884 184678195 -66009659 + AluY SINE Alu 1 305 -6 1249 181 73 4 chr2 184678621 184678880 -66008974 + L1MD3 LINE L1 7719 7995 0 2335 122 157 0 chr2 184681616 184681986 -66005868 + MSTA LTR MaLR 1 428 0 234 170 0 21 chr2 184683106 184683153 -66004701 + MIR3 SINE MIR 157 202 -6 414 239 174 30 chr2 184683902 184684069 -66003785 - L2 LINE L2 -21 3292 3102 296 323 11 0 chr2 184684099 184684192 -66003662 - L2 LINE L2 -297 3016 2923 669 153 4 6 chr2 184684776 184685039 -66002815 - AluJb SINE Alu -5 307 1 2261 162 73 15 chr2 184685892 184686395 -66001459 - Tigger7 DNA MER2_type 0 2487 2 2366 91 3 7 chr2 184686517 184686826 -66001028 - AluSc SINE Alu -1 308 1 282 216 11 57 chr2 184687008 184687096 -66000758 + MER112 DNA MER1_type 1 84 -176 21 71 0 0 chr2 184687413 184687455 -66000399 + AT_rich Low_complexity Low_complexity 1 42 0 866 203 0 0 chr2 184688230 184688378 -65999476 + FRAM SINE Alu 1 148 -28 352 0 0 0 chr2 184688378 184688417 -65999437 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 802 156 97 11 chr2 184688547 184688723 -65999131 + FRAM SINE Alu 1 174 -2 302 217 348 0 chr2 184688723 184688815 -65999039 + MER5A DNA MER1_type 66 189 0 2026 139 0 0 chr2 184689120 184689421 -65998433 + AluJb SINE Alu 1 301 -11 269 308 35 63 chr2 184689921 184690064 -65997790 + MLT1L LTR MaLR 131 269 -346 266 292 42 0 chr2 184690169 184690265 -65997589 + MLT1L LTR MaLR 422 521 -94 471 199 72 88 chr2 184690445 184690626 -65997228 + L2 LINE L2 3134 3311 -2 272 288 37 28 chr2 184690638 184690755 -65997099 + MIR SINE MIR 58 186 -22 211 264 139 78 chr2 184691050 184691105 -65996749 + L2 LINE L2 3002 3052 -261 1820 106 53 50 chr2 184691105 184691408 -65996446 + AluSx SINE Alu 1 304 -8 211 264 139 78 chr2 184691408 184691481 -65996373 + L2 LINE L2 3052 3138 -175 878 98 0 0 chr2 184691536 184691658 -65996196 + AluSp/q SINE Alu 191 312 -1 265 325 42 25 chr2 184692207 184692327 -65995527 + MIR3 SINE MIR 78 199 -9 291 307 229 6 chr2 184692559 184692725 -65995129 - MIR SINE MIR -12 250 48 376 297 126 34 chr2 184692883 184693295 -65994559 - MLT1J2 LTR MaLR -45 466 7 686 142 108 0 chr2 184693876 184693996 -65993858 - FLAM_C SINE Alu -10 133 1 891 232 39 31 chr2 184694357 184694616 -65993238 - MIR SINE MIR 0 262 2 1859 129 0 60 chr2 184695513 184695830 -65992024 - AluJb SINE Alu -14 298 1 289 279 0 18 chr2 184699242 184699353 -65988501 + (TA)n Simple_repeat Simple_repeat 2 110 0 458 236 106 8 chr2 184704037 184704160 -65983694 + MIR SINE MIR 49 183 -79 22 0 0 0 chr2 184704286 184704308 -65983546 + AT_rich Low_complexity Low_complexity 1 22 0 2075 148 15 6 chr2 184706392 184706724 -65981130 + MER1B DNA MER1_type 2 336 -1 217 269 0 0 chr2 184707274 184707326 -65980528 + (TA)n Simple_repeat Simple_repeat 1 52 0 211 346 10 0 chr2 184707275 184707376 -65980478 + (CATATA)n Simple_repeat Simple_repeat 2 103 0 * 318 26 0 0 chr2 184707781 184707820 -65980034 + (CA)n Simple_repeat Simple_repeat 2 40 0 26 0 0 0 chr2 184707873 184707899 -65979955 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chr2 184713390 184713425 -65974429 + AT_rich Low_complexity Low_complexity 1 35 0 482 267 60 7 chr2 184714442 184714592 -65973262 + MIR SINE MIR 98 255 -7 366 250 24 36 chr2 184715005 184715089 -65972765 - MIR SINE MIR -159 103 21 21 0 0 0 chr2 184715767 184715788 -65972066 + AT_rich Low_complexity Low_complexity 1 21 0 272 302 36 0 chr2 184715820 184715942 -65971912 + L1MC4a LINE L1 4681 4810 -1336 1811 144 13 35 chr2 184715950 184716263 -65971591 + AluJo SINE Alu 1 306 -6 23 0 0 0 chr2 184716264 184716287 -65971567 + AT_rich Low_complexity Low_complexity 1 23 0 1820 136 46 7 chr2 184716287 184716408 -65971446 + AluSq SINE Alu 1 116 -197 180 0 0 0 chr2 184716408 184716428 -65971426 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1820 136 46 7 chr2 184716428 184716613 -65971241 + AluSq SINE Alu 116 313 0 399 314 31 13 chr2 184716614 184716773 -65971081 + L1MC4a LINE L1 5739 5900 -1908 682 272 80 31 chr2 184716778 184717002 -65970852 + MIR SINE MIR 15 249 -13 2373 53 0 0 chr2 184717016 184717346 -65970508 + AluY SINE Alu 1 330 0 21 0 0 0 chr2 184717393 184717414 -65970440 + AT_rich Low_complexity Low_complexity 1 21 0 2439 239 102 3 chr2 184718854 184719626 -65968228 - L1ME3A LINE L1 -21 6149 5281 211 346 96 0 chr2 184722986 184723090 -65964764 + L2 LINE L2 3147 3260 -12 23 54 0 0 chr2 184723492 184723529 -65964325 + AT_rich Low_complexity Low_complexity 1 37 0 248 148 111 19 chr2 184724194 184724248 -65963606 + L1ME LINE L1 5592 5650 -471 846 247 86 86 chr2 184724484 184724950 -65962904 - L2 LINE L2 -1394 1920 1455 660 249 98 62 chr2 184724962 184725287 -65962567 + L2 LINE L2 2912 3248 -65 251 299 196 0 chr2 184725291 184725398 -65962456 - L2 LINE L2 -1851 1463 1336 284 327 106 0 chr2 184725401 184725514 -65962340 + L1MC/D LINE L1 5723 5847 -1961 2390 77 0 7 chr2 184725544 184725854 -65962000 + AluSp SINE Alu 1 308 -5 462 250 103 0 chr2 184727001 184727137 -65960717 + MIR SINE MIR 112 261 -1 2848 196 54 16 chr2 184727466 184728092 -65959762 + L1MD3 LINE L1 7344 7993 -2 291 344 56 76 chr2 184728276 184728622 -65959232 - MLT1J2 LTR MaLR -33 417 79 180 0 0 0 chr2 184728622 184728642 -65959212 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 291 344 56 76 chr2 184728642 184728705 -65959149 - MLT1J2 LTR MaLR -371 79 16 1998 143 10 7 chr2 184728944 184729244 -65958610 + AluSx SINE Alu 1 301 -11 359 292 75 36 chr2 184729283 184729564 -65958290 + L1M4 LINE L1 4368 4659 -1487 16465 122 54 6 chr2 184729622 184731666 -65956188 + Tigger4(Zombi) DNA MER2_type 2 2200 -531 237 33 0 0 chr2 184731666 184731696 -65956158 + (TAA)n Simple_repeat Simple_repeat 1 30 0 16465 122 54 6 chr2 184731696 184732250 -65955604 + Tigger4(Zombi) DNA MER2_type 2200 2726 -5 786 256 4 40 chr2 184733037 184733264 -65954590 - MIR SINE MIR -5 257 39 207 0 0 0 chr2 184733297 184733320 -65954534 + (A)n Simple_repeat Simple_repeat 1 23 0 746 172 0 30 chr2 184734021 184734155 -65953699 + FLAM_A SINE Alu 1 130 -3 2269 161 14 32 chr2 184734514 184734802 -65953052 + MSTB LTR MaLR 1 280 -146 2214 93 7 0 chr2 184734802 184735091 -65952763 + AluSp SINE Alu 3 293 -20 2269 161 14 32 chr2 184735091 184735236 -65952618 + MSTB LTR MaLR 280 426 0 407 302 62 45 chr2 184735241 184735427 -65952427 + MIR3 SINE MIR 1 203 -5 2689 7 0 16 chr2 184735443 184735753 -65952101 + AluYa5 SINE Alu 1 305 -6 2129 104 9 25 chr2 184736011 184736329 -65951525 - AluSp SINE Alu 0 313 1 1707 163 3 24 chr2 184736365 184736653 -65951201 + AluJo SINE Alu 30 311 -1 694 174 0 36 chr2 184736653 184736791 -65951063 + FLAM_C SINE Alu 1 133 0 779 236 111 48 chr2 184736801 184737072 -65950782 + L1MC4 LINE L1 7627 7914 -128 340 161 65 32 chr2 184737057 184737150 -65950704 + L1MD3 LINE L1 7900 7995 0 * 871 181 155 15 chr2 184737147 184737418 -65950436 + L1MC4 LINE L1 6936 7244 -798 893 315 23 20 chr2 184737421 184737767 -65950087 - L2 LINE L2 -757 2557 2211 308 291 32 17 chr2 184737970 184738099 -65949755 + L1ME4a LINE L1 1215 6092 -6 406 203 102 14 chr2 184738127 184738283 -65949571 - HAL1b LINE L1 -3 6118 1187 2161 100 7 0 chr2 184738414 184738704 -65949150 - AluSg SINE Alu -18 292 1 210 133 0 44 chr2 184739714 184739759 -65948095 + (TAAAAA)n Simple_repeat Simple_repeat 2 44 0 1511 203 137 34 chr2 184739820 184740264 -65947590 + L1MC5 LINE L1 6973 7462 -499 387 270 74 13 chr2 184741935 184742076 -65945778 + L1MD3 LINE L1 6617 6734 -1261 4620 133 31 55 chr2 184742092 184742912 -65944942 + L1MB2 LINE L1 5338 6138 -33 2067 126 3 3 chr2 184742912 184743205 -65944649 - AluSx SINE Alu -19 293 1 4620 133 31 55 chr2 184743205 184743232 -65944622 + L1MB2 LINE L1 6138 6164 -7 1039 150 55 32 chr2 184743246 184743466 -65944388 + L1MD3 LINE L1 7603 7827 -168 376 85 0 158 chr2 184743473 184743555 -65944299 + Tigger2 DNA MER2_type 1 69 -2649 * 2835 137 23 2 chr2 184743545 184743982 -65943872 + Tigger2 DNA MER2_type 2273 2718 0 1795 184 0 10 chr2 184743985 184744294 -65943560 - AluJb SINE Alu -6 306 1 2035 154 0 0 chr2 184744407 184744712 -65943142 + AluSx SINE Alu 1 305 -7 2420 270 69 35 chr2 184744967 184746095 -65941759 + L1M4 LINE L1 1428 2448 -5015 7676 115 54 10 chr2 184746095 184746998 -65940856 - Tigger3b DNA MER2_type -1797 1231 262 1614 176 10 23 chr2 184746998 184747304 -65940550 + AluJo SINE Alu 1 302 -10 7676 115 54 10 chr2 184747304 184747579 -65940275 - Tigger3b DNA MER2_type -2766 262 1 2420 270 69 35 chr2 184747579 184747607 -65940247 + L1M4 LINE L1 2448 2474 -4989 319 199 60 0 chr2 184747599 184747696 -65940158 + L1M4 LINE L1 2835 2919 -4646 * 1283 175 86 10 chr2 184747692 184747744 -65940110 + L1M4 LINE L1 6794 6841 -762 2128 129 10 3 chr2 184747744 184748053 -65939801 + AluSx SINE Alu 1 311 -1 1283 175 86 10 chr2 184748053 184748292 -65939562 + L1M4 LINE L1 6841 7107 -496 3139 202 93 61 chr2 184748363 184749127 -65938727 + L1MC4a LINE L1 6790 7595 -213 1775 156 3 51 chr2 184749127 184749441 -65938413 + AluJo SINE Alu 1 299 -13 3139 202 93 61 chr2 184749441 184749661 -65938193 + L1MC4a LINE L1 7595 7806 -2 1542 157 19 101 chr2 184749675 184749993 -65937861 - 7SLRNA srpRNA srpRNA -28 292 1 314 229 156 0 chr2 184750018 184750114 -65937740 + L1M4 LINE L1 5192 5302 -844 657 243 114 58 chr2 184750435 184750904 -65936950 + MLT1H LTR MaLR 1 549 0 1034 260 120 49 chr2 184751118 184751165 -65936689 + MLT1J LTR MaLR 13 55 -456 2244 113 0 0 chr2 184751165 184751466 -65936388 - AluSx SINE Alu -11 301 1 1034 260 120 49 chr2 184751466 184751680 -65936174 + MLT1J LTR MaLR 55 252 -259 2024 159 0 48 chr2 184751680 184752031 -65935823 - MER1B DNA MER1_type 0 337 4 1034 260 120 49 chr2 184752031 184752234 -65935620 + MLT1J LTR MaLR 252 511 0 1208 182 63 39 chr2 184752460 184752529 -65935325 + AluJb SINE Alu 2 68 -244 1675 102 0 0 chr2 184752529 184752754 -65935100 - AluSg/x SINE Alu -2 308 84 1208 182 63 39 chr2 184752754 184752970 -65934884 + AluJb SINE Alu 68 294 -18 372 313 18 49 chr2 184753079 184753242 -65934612 - L2 LINE L2 -10 3303 3146 285 260 0 13 chr2 184753223 184753300 -65934554 + MIR SINE MIR 183 258 -4 * 305 147 118 29 chr2 184753675 184753743 -65934111 + LTR67 LTR ERVL 484 557 0 440 183 32 11 chr2 184753773 184753866 -65933988 + L1ME1 LINE L1 6066 6160 -6 348 234 161 6 chr2 184753993 184754160 -65933694 + MER2 DNA MER2_type 3 143 -202 2066 109 0 26 chr2 184754160 184754462 -65933392 - AluSx SINE Alu -18 294 1 348 234 161 6 chr2 184754462 184754539 -65933315 + MER2 DNA MER2_type 143 344 -1 2202 112 0 0 chr2 184755142 184755436 -65932418 + AluSx SINE Alu 1 294 -18 2439 100 0 0 chr2 184755548 184755858 -65931996 + AluSx SINE Alu 1 310 -2 1600 118 14 64 chr2 184756604 184756924 -65930930 + AluSx SINE Alu 1 305 0 215 132 26 0 chr2 184758169 184758207 -65929647 + (CCCCG)n Simple_repeat Simple_repeat 5 43 0 633 272 80 42 chr2 184758739 184758952 -65928902 + MIR SINE MIR 12 232 -30 408 264 57 9 chr2 184759192 184759298 -65928556 - MIR SINE MIR -115 147 37 1662 174 7 3 chr2 184759310 184759597 -65928257 + AluJb SINE Alu 25 312 0 2355 90 0 0 chr2 184759640 184759930 -65927924 - AluSg SINE Alu -18 292 3 2284 52 42 3 chr2 184760388 184760677 -65927177 + AluY SINE Alu 2 301 -10 2106 135 0 0 chr2 184760685 184760981 -65926873 + AluSx SINE Alu 1 296 -16 2351 77 3 19 chr2 184761603 184761914 -65925940 + AluSp SINE Alu 8 313 0 223 343 45 0 chr2 184762792 184762859 -65924995 - L2 LINE L2 -21 3251 3182 2300 79 0 0 chr2 184762864 184763180 -65924674 + AluY SINE Alu 1 316 0 407 61 99 0 chr2 184763180 184763311 -65924543 + (TA)n Simple_repeat Simple_repeat 2 145 0 1578 144 34 52 chr2 184763616 184763907 -65923947 - AluJo SINE Alu -17 295 10 2995 172 143 135 chr2 184763949 184764463 -65923391 - L1MD3 LINE L1 -52 7943 7435 839 136 8 1 chr2 184764463 184764593 -65923261 - MLT1F1 LTR MaLR -444 123 1 2995 172 143 135 chr2 184764593 184765103 -65922751 - L1MD3 LINE L1 -560 7435 6781 583 213 131 22 chr2 184765231 184765414 -65922440 + MIR SINE MIR 59 261 -1 602 176 263 68 chr2 184765449 184765654 -65922200 + MIR SINE MIR 18 262 0 2103 113 3 0 chr2 184765688 184765971 -65921883 - AluSx SINE Alu -28 284 1 1725 152 53 20 chr2 184766666 184766968 -65920886 - AluJo SINE Alu 0 312 1 396 336 146 18 chr2 184767630 184768014 -65919840 - L2 LINE L2 -649 2665 2233 1839 132 22 0 chr2 184768048 184768321 -65919533 + AluSx SINE Alu 20 298 -14 2259 188 27 20 chr2 184768415 184768856 -65918998 - L1MB5 LINE L1 0 6174 5731 507 193 7 87 chr2 184768866 184769016 -65918838 - L1MA4 LINE L1 -5 6295 6158 26 0 0 0 chr2 184769563 184769589 -65918265 + AT_rich Low_complexity Low_complexity 1 26 0 884 281 56 30 chr2 184769671 184769973 -65917881 - L2 LINE L2 0 3313 3004 1616 176 70 0 chr2 184770849 184771122 -65916732 + AluJb SINE Alu 1 292 -20 279 230 91 21 chr2 184771917 184772019 -65915835 - MIR3 SINE MIR -97 111 14 202 205 0 0 chr2 184772450 184772489 -65915365 - L2 LINE L2 -2 3311 3273 1691 158 91 0 chr2 184773777 184774062 -65913792 - AluJb SINE Alu -1 311 1 280 233 116 23 chr2 184774876 184774962 -65912892 + MIR SINE MIR 86 179 -83 1292 221 3 3 chr2 184775163 184775453 -65912401 + L1M4 LINE L1 4908 5197 -949 2527 43 3 46 chr2 184775871 184776196 -65911658 - AluY SINE Alu 0 311 1 296 313 102 17 chr2 184776238 184776414 -65911440 - MIR SINE MIR -6 256 66 2164 110 0 14 chr2 184776997 184777289 -65910565 + AluSq SINE Alu 1 288 -25 1911 194 44 21 chr2 184777365 184777751 -65910103 - MSTD LTR MaLR -1 395 1 594 312 21 21 chr2 184777851 184778040 -65909814 - MIR SINE MIR -73 189 1 270 81 0 0 chr2 184778628 184778665 -65909189 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 445 250 92 33 chr2 184778681 184778833 -65909021 - MIR SINE MIR -2 260 100 192 266 127 25 chr2 184779069 184779148 -65908706 + MIR SINE MIR 118 204 -58 777 191 0 15 chr2 184779360 184779491 -65908363 + FLAM_C SINE Alu 1 129 -4 1749 181 0 7 chr2 184779495 184779788 -65908066 + AluJo SINE Alu 1 291 -21 1759 123 0 156 chr2 184779790 184780148 -65907706 + AluSx SINE Alu 1 302 0 1860 111 52 0 chr2 184780149 184780419 -65907435 + L1PA14 LINE L1 5869 6152 -9 21 57 0 0 chr2 184780835 184780870 -65906984 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr2 184781771 184781799 -65906055 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr2 184784228 184784270 -65903584 + AT_rich Low_complexity Low_complexity 1 42 0 416 293 81 6 chr2 184784363 184784537 -65903317 - L2 LINE L2 -910 2404 2218 1992 94 0 40 chr2 184784581 184784856 -65902998 - AluSx SINE Alu -48 264 1 296 309 49 49 chr2 184784857 184785019 -65902835 - MER5B DNA MER1_type -10 168 7 1233 282 198 30 chr2 184785347 184785513 -65902341 - L2 LINE L2 -1158 2156 2019 1541 183 35 7 chr2 184785513 184785802 -65902052 - AluJb SINE Alu -14 298 2 1233 282 198 30 chr2 184785802 184786500 -65901354 - L2 LINE L2 -1295 2019 1147 1793 134 29 14 chr2 184786653 184786929 -65900925 + MER1B DNA MER1_type 60 339 0 1359 216 65 18 chr2 184786959 184787237 -65900617 + AluJo SINE Alu 1 291 -11 34 42 0 0 chr2 184787276 184787324 -65900530 + AT_rich Low_complexity Low_complexity 1 48 0 2252 110 0 3 chr2 184787346 184787647 -65900207 - AluSx SINE Alu -12 300 1 293 307 53 33 chr2 184787661 184787811 -65900043 - L1MC/D LINE L1 -2074 5734 5582 186 305 122 99 chr2 184787928 184788039 -65899815 - L2 LINE L2 -10 3262 3146 1133 164 27 45 chr2 184788039 184788259 -65899595 - MER20 DNA MER1_type -3 216 1 186 305 122 99 chr2 184788259 184788278 -65899576 - L2 LINE L2 -126 3146 3129 2206 95 0 7 chr2 184788646 184788931 -65898923 - AluSq SINE Alu -7 306 24 388 215 159 0 chr2 184789227 184789334 -65898520 + L1MC5 LINE L1 7703 7826 -135 21 0 0 0 chr2 184789538 184789559 -65898295 + AT_rich Low_complexity Low_complexity 1 21 0 323 190 0 0 chr2 184790406 184790464 -65897390 - MER103 DNA DNA -63 103 46 185 293 0 0 chr2 184790690 184790731 -65897123 - L2 LINE L2 -557 2757 2717 1960 134 37 7 chr2 184790810 184791108 -65896746 + AluSx SINE Alu 1 307 -5 1551 147 139 19 chr2 184792114 184792380 -65895474 - AluJb SINE Alu -4 298 1 1379 175 48 37 chr2 184792807 184793076 -65894778 - AluJb SINE Alu -40 272 1 2078 79 19 73 chr2 184793080 184793397 -65894457 - AluY SINE Alu -11 300 1 268 319 53 39 chr2 184793529 184793763 -65894091 - L2 LINE L2 -799 2515 2275 2158 120 0 10 chr2 184793763 184794064 -65893790 + AluSq SINE Alu 1 298 -15 268 319 53 39 chr2 184794064 184794111 -65893743 - L2 LINE L2 -1039 2275 2230 894 196 60 20 chr2 184794205 184794404 -65893450 - MER3 DNA MER1_type -2 207 1 182 364 82 30 chr2 184794729 184794960 -65892894 + L2 LINE L2 2248 2490 -824 184 222 28 0 chr2 184795402 184795474 -65892380 + (TA)n Simple_repeat Simple_repeat 1 74 0 367 230 0 0 chr2 184796057 184796131 -65891723 - MER116 DNA Mariner 0 80 7 1700 103 0 4 chr2 184796673 184796905 -65890949 + AluSg SINE Alu 14 244 -66 1681 98 16 120 chr2 184797117 184797434 -65890420 - L1MA4A LINE L1 -14 6289 6006 1947 127 35 0 chr2 184797488 184797771 -65890083 - AluSx SINE Alu -19 293 1 1833 117 0 81 chr2 184798641 184798963 -65888891 - AluSx SINE Alu 0 308 11 341 25 0 0 chr2 184798987 184799027 -65888827 - AluY SINE Alu -253 48 9 5283 186 84 53 chr2 184799045 184799363 -65888491 + Charlie1a DNA MER1_type 1 308 -2453 3878 163 74 7 chr2 184799363 184800080 -65887774 - L1MB7 LINE L1 -5 6179 5415 5283 186 84 53 chr2 184800080 184801164 -65886690 + Charlie1a DNA MER1_type 308 1447 -8 1458 199 77 7 chr2 184801752 184802039 -65885815 - AluJo SINE Alu -5 307 1 194 281 37 89 chr2 184802695 184802830 -65885024 + L3 LINE CR1 1182 1309 -268 208 254 0 0 chr2 184803022 184803077 -65884777 + T-rich Low_complexity Low_complexity 1 55 0 602 126 19 19 chr2 184803896 184803999 -65883855 - Tigger7 DNA MER2_type -1 2486 2384 * 1108 213 35 13 chr2 184803992 184804222 -65883632 - Tigger7 DNA MER2_type -2242 245 11 250 145 290 0 chr2 184804909 184804978 -65882876 + MER104 DNA Tc2 5 93 -87 504 237 125 41 chr2 184805086 184805414 -65882440 + L1MEd LINE L1 1020 1319 -1171 1666 163 23 23 chr2 184805414 184805715 -65882139 + AluJb SINE Alu 1 301 -11 504 237 125 41 chr2 184805715 184805856 -65881998 + L1MEd LINE L1 1319 1622 -868 747 183 24 16 chr2 184805995 184806121 -65881733 + FLAM_A SINE Alu 2 128 -5 350 250 36 36 chr2 184806149 184806289 -65881565 - L1MC5 LINE L1 -49 7912 7773 1974 133 3 3 chr2 184806305 184806591 -65881263 - AluSx SINE Alu -25 287 2 255 173 39 0 chr2 184806596 184806648 -65881206 - L1MC5 LINE L1 -178 7783 7730 648 133 91 49 chr2 184806653 184806796 -65881058 + Charlie1 DNA MER1_type 2 150 -2611 1993 111 7 7 chr2 184807495 184807774 -65880080 + AluSx SINE Alu 9 287 -25 527 161 9 36 chr2 184807780 184807892 -65879962 + L1MC3 LINE L1 7677 7785 0 386 234 211 33 chr2 184808255 184808592 -65879262 + LTR33 LTR ERVL 112 508 -13 305 237 0 53 chr2 184808627 184808703 -65879151 + L2 LINE L2 3169 3240 -73 387 230 183 16 chr2 184808762 184808888 -65878966 + MER3 DNA MER1_type 46 192 -17 830 273 65 19 chr2 184811251 184811618 -65876236 + L1MC5 LINE L1 7508 7891 -70 2194 94 7 10 chr2 184811618 184811915 -65875939 - AluSx SINE Alu -16 296 1 325 135 0 0 chr2 184811975 184812027 -65875827 + MER66A LTR ERV1 287 338 -140 216 0 0 0 chr2 184812883 184812907 -65874947 + (T)n Simple_repeat Simple_repeat 1 24 0 684 326 84 9 chr2 184813166 184813586 -65874268 - Tigger8 DNA MER2_type -128 538 8 514 217 9 9 chr2 184813596 184813702 -65874152 + L2 LINE L2 3186 3291 -22 235 217 0 0 chr2 184814691 184814737 -65873117 + (TG)n Simple_repeat Simple_repeat 1 46 0 625 257 50 86 chr2 184815540 184815937 -65871917 - L2 LINE L2 -1 3312 2930 213 314 0 0 chr2 184816454 184816524 -65871330 + MIR SINE MIR 49 118 -144 30 59 0 0 chr2 184818005 184818056 -65869798 + AT_rich Low_complexity Low_complexity 1 51 0 1003 180 0 18 chr2 184819503 184819670 -65868184 + FRAM SINE Alu 1 159 -17 345 131 0 0 chr2 184819671 184819732 -65868122 + (CA)n Simple_repeat Simple_repeat 2 62 0 225 318 91 27 chr2 184819860 184819970 -65867884 - L2 LINE L2 -20 3252 3136 1324 257 33 35 chr2 184820289 184820744 -65867110 - L1MEc LINE L1 -4653 2469 2016 2335 113 0 3 chr2 184820744 184821054 -65866800 - AluSx SINE Alu -3 309 1 860 289 114 65 chr2 184821055 184821598 -65866256 - L1MEc LINE L1 -5021 1402 833 837 113 53 8 chr2 184824709 184824842 -65863012 + MER85 DNA T2_type 1 139 0 2255 98 7 3 chr2 184825629 184825925 -65861929 - AluSc SINE Alu -12 297 1 4093 177 60 136 chr2 184826099 184826162 -65861692 + Charlie1a DNA MER1_type 1 67 -2694 1981 150 0 3 chr2 184826162 184826449 -65861405 + AluSx SINE Alu 1 286 -26 4093 177 60 136 chr2 184826449 184827663 -65860191 + Charlie1a DNA MER1_type 67 1180 -275 598 251 115 6 chr2 184829208 184829391 -65858463 - L1ME3A LINE L1 -25 6145 5943 233 327 0 18 chr2 184829400 184829510 -65858344 - L1ME3A LINE L1 -689 5432 5325 1337 231 78 0 chr2 184829664 184829958 -65857896 + Tigger7 DNA MER2_type 2 318 -2169 1131 164 11 0 chr2 184829954 184830137 -65857717 + Tigger7 DNA MER2_type 2302 2486 -5 * 483 311 176 40 chr2 184831446 184831826 -65856028 - L2 LINE L2 -5 3308 2877 2353 100 0 0 chr2 184832396 184832706 -65855148 + AluSg SINE Alu 1 310 0 325 283 18 9 chr2 184832862 184832975 -65854879 - MIR SINE MIR -65 143 30 1707 152 13 44 chr2 184833861 184834176 -65853678 + AluJo SINE Alu 1 305 -7 2537 243 95 62 chr2 184834411 184835155 -65852699 + L1MC4a LINE L1 5268 5986 -1822 2946 80 11 11 chr2 184835155 184835529 -65852325 - THE1C LTR MaLR -1 374 1 2537 243 95 62 chr2 184835529 184835642 -65852212 + L1MC4a LINE L1 5986 6094 -1714 2222 116 7 0 chr2 184835642 184835936 -65851918 - AluSx SINE Alu -16 296 1 2537 243 95 62 chr2 184835936 184836104 -65851750 + L1MC4a LINE L1 6094 6328 -1480 2239 104 10 0 chr2 184837217 184837524 -65850330 + AluSp SINE Alu 1 310 -3 263 226 0 0 chr2 184837536 184837598 -65850256 + L1MC4a LINE L1 6407 6468 -1340 1690 248 97 11 chr2 184837619 184838094 -65849760 + L1MC4a LINE L1 6432 6947 -861 793 229 79 20 chr2 184838125 184838367 -65849487 - MLT1F1 LTR MaLR -300 267 14 990 234 138 84 chr2 184838376 184838665 -65849189 + L1MC4 LINE L1 7361 7633 -409 2260 109 0 10 chr2 184838665 184838968 -65848886 + AluSq SINE Alu 4 303 -10 990 234 138 84 chr2 184838968 184839322 -65848532 + L1MC4 LINE L1 7633 8039 -3 2181 92 20 3 chr2 184839596 184839891 -65847963 - AluSq SINE Alu -13 300 1 245 273 91 0 chr2 184839953 184840041 -65847813 - MIR SINE MIR -66 142 47 21 0 0 0 chr2 184840561 184840582 -65847272 + AT_rich Low_complexity Low_complexity 1 21 0 1644 163 46 0 chr2 184841721 184842003 -65845851 - AluJo SINE Alu -17 295 1 402 162 50 30 chr2 184842471 184842570 -65845284 - MER5B DNA MER1_type 0 178 78 233 191 0 21 chr2 184843477 184843524 -65844330 + (TG)n Simple_repeat Simple_repeat 1 46 0 1057 162 0 0 chr2 184843916 184844083 -65843771 - FRAM SINE Alu 0 40 1 22 0 0 0 chr2 184844296 184844318 -65843536 + AT_rich Low_complexity Low_complexity 1 22 0 2145 96 64 0 chr2 184844890 184845170 -65842684 + AluSx SINE Alu 1 298 -14 261 284 82 52 chr2 184845320 184845454 -65842400 - MIR SINE MIR -50 212 75 394 250 91 15 chr2 184846127 184846259 -65841595 + MIR3 SINE MIR 18 159 -49 193 235 274 39 chr2 184846607 184846709 -65841145 + L2 LINE L2 3182 3307 -6 1690 136 65 65 chr2 184847870 184848178 -65839676 + AluSx SINE Alu 1 308 -4 1841 169 14 7 chr2 184848362 184848652 -65839202 + AluJo SINE Alu 1 292 -20 354 78 0 20 chr2 184850340 184850391 -65837463 + L1M2 LINE L1 5450 5499 -792 25 0 0 0 chr2 184851900 184851925 -65835929 + AT_rich Low_complexity Low_complexity 1 25 0 540 321 29 36 chr2 184852750 184853030 -65834824 + L2 LINE L2 3031 3308 -5 1024 207 118 26 chr2 184853167 184853437 -65834417 - MER58B DNA MER1_type -3 338 44 516 234 39 19 chr2 184853533 184853687 -65834167 + L2 LINE L2 1609 1765 -1549 199 280 100 0 chr2 184853840 184853890 -65833964 + MIR SINE MIR 20 74 -188 741 221 104 0 chr2 184854386 184854549 -65833305 - MER5A DNA MER1_type -3 186 7 1916 229 61 28 chr2 184855069 184855814 -65832040 + L1ME2 LINE L1 5046 5817 -347 639 211 50 25 chr2 184855834 184855995 -65831859 + L1ME2 LINE L1 5991 6155 -9 1443 171 12 16 chr2 184856012 184856264 -65831590 + AluJo SINE Alu 42 292 -20 382 325 0 48 chr2 184856342 184856468 -65831386 + L2 LINE L2 3153 3272 0 279 181 117 53 chr2 184856653 184856747 -65831107 - L1ME LINE L1 -617 5504 5405 216 268 99 0 chr2 184856780 184856851 -65831003 + L3b LINE CR1 1264 1341 -242 2436 87 0 0 chr2 184857223 184857532 -65830322 + AluSc SINE Alu 1 309 0 626 276 7 0 chr2 184857866 184858011 -65829843 - MIR SINE MIR 0 262 117 954 93 79 0 chr2 184858928 184859068 -65828786 - AluSx SINE Alu -5 304 154 606 151 0 0 chr2 184859068 184859154 -65828700 - AluSx SINE Alu -225 87 2 2286 90 0 19 chr2 184859488 184859800 -65828054 - AluSg SINE Alu -4 306 1 444 284 62 19 chr2 184859955 184860117 -65827737 - MIR SINE MIR -74 188 20 2105 163 58 0 chr2 184860237 184860617 -65827237 - L1MB7 LINE L1 -17 6167 5766 936 174 23 59 chr2 184860598 184861123 -65826731 - L1MB7 LINE L1 -685 5499 4840 * 4643 140 34 58 chr2 184861124 184862032 -65825822 + L1MB2 LINE L1 5285 6170 -1 1623 251 32 5 chr2 184862021 184862460 -65825394 - L1MB7 LINE L1 -1280 4866 4416 * 186 118 0 0 chr2 184863165 184863199 -65824655 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 1492 163 38 31 chr2 184863199 184863364 -65824490 - AluJo SINE Alu -22 290 121 198 0 0 0 chr2 184863364 184863386 -65824468 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1492 163 38 31 chr2 184863386 184863508 -65824346 - AluJo SINE Alu -191 121 1 2024 125 14 3 chr2 184864005 184864292 -65823562 - AluJb SINE Alu -22 290 1 201 271 0 0 chr2 184864575 184864623 -65823231 - MIR SINE MIR -79 129 82 2386 115 0 0 chr2 184864908 184865220 -65822634 + AluSx SINE Alu 1 312 0 225 207 58 69 chr2 184865318 184865405 -65822449 - L1ME4a LINE L1 -104 6017 5932 270 341 45 14 chr2 184865529 184865745 -65822109 - L2 LINE L2 -286 3027 2725 1214 103 0 0 chr2 184866022 184866197 -65821657 - AluY SINE Alu -1 310 136 1086 198 50 4 chr2 184866210 184866448 -65821406 - MER33 DNA MER1_type -75 249 1 490 269 39 13 chr2 184866658 184866814 -65821040 - L2 LINE L2 -784 2530 2371 2734 175 11 54 chr2 184866858 184866890 -65820964 + L1M4 LINE L1 4720 4752 -1394 2185 125 0 0 chr2 184866890 184867187 -65820667 + AluSx SINE Alu 1 297 -15 2202 108 3 32 chr2 184867187 184867501 -65820353 + AluSp SINE Alu 1 305 -8 2734 175 11 54 chr2 184867501 184868094 -65819760 + L1M4 LINE L1 4750 5319 -827 446 286 95 73 chr2 184868105 184868386 -65819468 - L2 LINE L2 -974 2340 2046 2185 135 0 0 chr2 184868386 184868698 -65819156 + AluSx SINE Alu 1 312 0 446 286 95 73 chr2 184868698 184868815 -65819039 - L2 LINE L2 -1268 2046 1933 2307 86 0 0 chr2 184868834 184869137 -65818717 + AluSx SINE Alu 5 307 -5 494 153 10 34 chr2 184869152 184869352 -65818502 + AluJo SINE Alu 31 311 -1 657 265 202 30 chr2 184869381 184869475 -65818379 - L2 LINE L2 -1508 1806 1729 354 45 0 0 chr2 184869475 184869519 -65818335 + (TTGG)n Simple_repeat Simple_repeat 1 44 0 657 265 202 30 chr2 184869519 184869850 -65818004 - L2 LINE L2 -1585 1729 1308 412 282 36 56 chr2 184871009 184871204 -65816650 + MLT1L LTR MaLR 120 310 -305 828 173 49 25 chr2 184871206 184871368 -65816486 - FRAM SINE Alu 0 166 1 320 283 17 33 chr2 184871531 184871651 -65816203 + MLT1L LTR MaLR 487 604 -11 22 35 0 0 chr2 184871873 184871902 -65815952 + AT_rich Low_complexity Low_complexity 1 29 0 1794 153 3 20 chr2 184871963 184872257 -65815597 - AluJo SINE Alu -23 289 1 1710 155 42 3 chr2 184873177 184873461 -65814393 - AluJo SINE Alu -15 297 3 1374 231 19 21 chr2 184873619 184873992 -65813862 - MER74B LTR ERVL -58 564 193 316 157 48 72 chr2 184874023 184874106 -65813748 - MER74B LTR ERVL -541 81 1 1306 249 90 84 chr2 184874276 184874821 -65813033 + MER77 LTR ERV1 54 601 -4 219 323 21 0 chr2 184875237 184875330 -65812524 + MIR SINE MIR 168 262 0 516 261 149 5 chr2 184875335 184875530 -65812324 - L1MC/D LINE L1 -2034 5774 5552 2040 150 0 0 chr2 184875531 184875824 -65812030 + AluSx SINE Alu 1 293 -19 362 208 1 11 chr2 184875862 184875949 -65811905 - L1ME1 LINE L1 -1 6163 6080 1740 186 3 38 chr2 184875982 184876300 -65811554 - AluJb SINE Alu -5 307 1 192 276 130 57 chr2 184876801 184876924 -65810930 + L3 LINE CR1 608 739 -838 1876 150 0 11 chr2 184877020 184877331 -65810523 + AluJb SINE Alu 1 308 0 2201 116 0 0 chr2 184877472 184877764 -65810090 - AluSq SINE Alu -21 292 1 748 143 0 129 chr2 184878532 184878679 -65809175 - FLAM_A SINE Alu -5 128 1 2014 125 13 16 chr2 184878773 184879078 -65808776 + AluSg SINE Alu 1 304 -6 1365 237 197 39 chr2 184879317 184879785 -65808069 - MLT1F LTR MaLR 0 542 1 2330 96 0 3 chr2 184879899 184880201 -65807653 + AluSp SINE Alu 2 302 -11 562 259 78 16 chr2 184880253 184880446 -65807408 - LTR16A LTR ERVL -7 443 239 276 184 20 0 chr2 184880443 184880492 -65807362 - MER63 DNA MER1_type -114 722 673 * 1412 200 17 24 chr2 184880493 184880783 -65807071 - AluJo SINE Alu -24 288 1 358 213 13 0 chr2 184880898 184880973 -65806881 - MER103 DNA DNA -75 91 16 341 290 15 23 chr2 184881427 184881558 -65806296 + CT-rich Low_complexity Low_complexity 2 131 0 643 267 98 1 chr2 184883716 184883927 -65803927 + MIR SINE MIR 35 262 0 216 298 115 10 chr2 184883910 184884014 -65803840 - MIR SINE MIR -98 164 50 * 498 324 27 9 chr2 184884044 184884269 -65803585 - L2 LINE L2 -176 3096 2868 858 148 0 44 chr2 184884461 184884596 -65803258 - FLAM_C SINE Alu -3 130 2 662 219 191 8 chr2 184884634 184884890 -65802964 - MER46C DNA MER2_type -21 317 15 265 267 122 23 chr2 184884882 184885054 -65802800 + MER113 DNA MER1_type? 164 352 -169 * 564 170 9 0 chr2 184885054 184885166 -65802688 + L1MC3 LINE L1 7673 7785 0 2137 144 53 14 chr2 184885212 184885573 -65802281 + THE1C LTR MaLR 1 375 0 28 0 0 0 chr2 184886079 184886107 -65801747 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 184886975 184886996 -65800858 + AT_rich Low_complexity Low_complexity 1 21 0 543 255 21 14 chr2 184888668 184888809 -65799045 - MIR SINE MIR -86 176 35 902 182 107 11 chr2 184888809 184889083 -65798771 + MSTD LTR MaLR 3 395 -1 195 162 0 0 chr2 184939811 184939848 -65748006 + A-rich Low_complexity Low_complexity 1 37 0 355 276 35 26 chr2 184941815 184941931 -65745923 - L3b LINE CR1 -56 1527 1411 286 283 25 42 chr2 184942050 184942170 -65745684 - MER45A DNA AcHobo -29 149 32 1233 236 73 8 chr2 184942370 184942809 -65745045 - L2 LINE L2 -95 3218 2751 587 215 194 0 chr2 184942810 184942954 -65744900 - L2 LINE L2 -764 2550 2379 2007 154 0 0 chr2 184943326 184943624 -65744230 - AluSx SINE Alu -14 298 1 202 300 177 0 chr2 184943928 184944058 -65743796 - MIR3 SINE MIR -22 186 34 1075 139 61 132 chr2 184944901 184945211 -65742643 - MLT1A1 LTR MaLR -77 288 1 1498 203 134 26 chr2 184945782 184945952 -65741902 + MLT1C LTR MaLR 4 154 -313 1887 162 3 16 chr2 184945952 184946267 -65741587 + AluJb SINE Alu 1 311 -1 1498 203 134 26 chr2 184946267 184946515 -65741339 + MLT1C LTR MaLR 154 467 0 353 361 36 31 chr2 184946624 184946818 -65741036 + MIR SINE MIR 18 212 -50 2599 64 0 0 chr2 184947918 184948229 -65739625 - AluY SINE Alu 0 311 1 2162 116 0 26 chr2 184948409 184948720 -65739134 - AluSx SINE Alu -9 303 1 1935 160 0 6 chr2 184949336 184949649 -65738205 + AluJo SINE Alu 1 311 -1 302 123 51 36 chr2 184950272 184950410 -65737444 + (TTATA)n Simple_repeat Simple_repeat 5 144 0 328 150 67 0 chr2 184950418 184950478 -65737376 + MLT2A1 LTR ERVL 334 397 -47 254 189 47 47 chr2 184950480 184950649 -65737205 + (TATAA)n Simple_repeat Simple_repeat 5 173 0 380 192 60 12 chr2 184950670 184950837 -65737017 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 308 118 50 42 chr2 184950856 184950975 -65736879 + (TATAA)n Simple_repeat Simple_repeat 4 123 0 405 124 48 30 chr2 184950996 184951401 -65736453 + (TTATA)n Simple_repeat Simple_repeat 1 412 0 420 129 83 9 chr2 184951403 184951758 -65736096 + (TA)n Simple_repeat Simple_repeat 1 381 0 29 0 0 0 chr2 184951758 184951787 -65736067 + AT_rich Low_complexity Low_complexity 1 29 0 2558 104 67 8 chr2 184951787 184952163 -65735691 - MLT2A1 LTR ERVL -45 399 2 2318 309 54 41 chr2 184952182 184954176 -65733678 + ERVL LTR ERVL 3035 5186 -578 1378 199 32 97 chr2 184954177 184954342 -65733512 - L1MC5 LINE L1 -452 7509 7335 2256 113 0 3 chr2 184954342 184954652 -65733202 - AluSc SINE Alu 0 309 1 1378 199 32 97 chr2 184954652 184955020 -65732834 - L1MC5 LINE L1 -626 7335 7011 935 159 0 85 chr2 184955120 184955309 -65732545 + MER20 DNA MER1_type 46 218 -1 28 0 0 0 chr2 184956492 184956520 -65731334 + AT_rich Low_complexity Low_complexity 1 28 0 267 167 0 21 chr2 184957088 184957136 -65730718 + MER5A DNA MER1_type 10 56 -133 977 190 20 15 chr2 184957139 184957334 -65730520 + AluJb SINE Alu 106 301 -11 244 274 226 10 chr2 184957334 184957436 -65730418 + MER5A DNA MER1_type 66 189 0 228 229 33 16 chr2 184958597 184958658 -65729196 + LTR67 LTR ERVL 168 229 -328 573 248 27 20 chr2 184958756 184958905 -65728949 + LTR67 LTR ERVL 408 557 0 21 36 0 0 chr2 184959646 184959674 -65728180 + AT_rich Low_complexity Low_complexity 1 28 0 4265 192 26 14 chr2 184959883 184960684 -65727170 + MER21B LTR ERV1 42 852 -11 236 270 0 97 chr2 184960692 184960877 -65726977 - L1MC5 LINE L1 -45 7916 7750 316 180 79 34 chr2 184960948 184961037 -65726817 - L1MC5 LINE L1 -263 7698 7606 1240 171 63 56 chr2 184961866 184962153 -65725701 - AluJo SINE Alu -23 289 1 2367 42 0 42 chr2 184962365 184962672 -65725182 + AluY SINE Alu 1 294 -17 412 228 0 0 chr2 184962839 184962931 -65724923 - MER53 DNA DNA -96 93 2 273 229 0 16 chr2 184962995 184963056 -65724798 + MLT1K LTR MaLR 183 242 -346 277 208 0 0 chr2 184963078 184963126 -65724728 + MER21B LTR ERV1 562 609 -254 231 222 16 48 chr2 184963365 184963428 -65724426 + MLT1K LTR MaLR 520 580 -8 228 122 0 0 chr2 184964194 184964235 -65723619 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 1221 204 84 32 chr2 184964635 184964919 -65722935 - AluJb SINE Alu -13 299 1 2143 141 0 0 chr2 184964965 184965264 -65722590 + AluSx SINE Alu 1 299 -13 780 198 64 17 chr2 184965977 184966149 -65721705 - L1PB4 LINE L1 -3 6153 5974 318 333 0 26 chr2 184966166 184966280 -65721574 + MIR SINE MIR 149 259 -3 366 80 0 0 chr2 184966345 184966395 -65721459 + (CA)n Simple_repeat Simple_repeat 1 50 0 694 278 17 6 chr2 184967556 184967908 -65719946 - AluJo SINE Alu 0 488 135 257 305 30 46 chr2 184968017 184968148 -65719706 - MIR SINE MIR -130 132 4 196 273 0 0 chr2 184970043 184970087 -65717767 - L2 LINE L2 -6 3266 3223 1915 222 63 24 chr2 184970088 184970579 -65717275 + MLT1H1 LTR MaLR 1 510 -45 1419 272 52 28 chr2 184970865 184971361 -65716493 + MLT1J LTR MaLR 4 511 0 184 347 111 0 chr2 184971369 184971441 -65716413 - L2 LINE L2 -51 3221 3142 378 338 64 11 chr2 184971471 184971695 -65716159 - MIR SINE MIR -6 256 17 1853 147 7 3 chr2 184971834 184972297 -65715557 - AluJb SINE Alu 0 464 1 610 193 167 0 chr2 184972297 184972411 -65715443 - AluJo SINE Alu -177 135 3 775 148 0 47 chr2 184974033 184974161 -65713693 + MLT1A1 LTR MaLR 244 365 0 292 370 101 11 chr2 184974570 184974759 -65713095 + MIR SINE MIR 18 223 -39 186 286 77 44 chr2 184974829 184974920 -65712934 + MIR3 SINE MIR 67 160 -48 296 237 11 11 chr2 184974970 184975063 -65712791 - MER5A DNA MER1_type -83 106 14 441 216 75 22 chr2 184975767 184975901 -65711953 + MER5A DNA MER1_type 1 141 -48 341 96 0 19 chr2 184975904 184975956 -65711898 - MADE1 DNA Mariner 0 80 30 791 285 151 11 chr2 184976445 184976796 -65711058 - L2 LINE L2 -549 2765 2366 1657 181 30 10 chr2 184976824 184977122 -65710732 - AluJo SINE Alu -8 304 1 2495 110 125 8 chr2 184977309 184977692 -65710162 - MSTA LTR MaLR 0 428 1 204 250 0 0 chr2 184977926 184977966 -65709888 + L2 LINE L2 3186 3225 -47 261 276 9 67 chr2 184977966 184978071 -65709783 - MIR SINE MIR -68 194 96 322 280 153 44 chr2 184978458 184978514 -65709340 - L1ME4a LINE L1 -45 6076 6028 4813 132 125 39 chr2 184978514 184979371 -65708483 + MER21A LTR ERV1 1 931 0 322 280 153 44 chr2 184979371 184979589 -65708265 - L1ME4a LINE L1 -93 6028 5772 1792 160 0 21 chr2 184979705 184979992 -65707862 - AluJo SINE Alu -31 281 1 397 291 99 14 chr2 184980580 184980721 -65707133 - MIR SINE MIR -73 189 37 651 197 21 14 chr2 184981309 184981451 -65706403 + L1MA10 LINE L1 6180 6322 -12 4577 123 18 52 chr2 184983991 184984706 -65703148 - LTR8 LTR ERV1 0 691 1 422 260 141 40 chr2 184984926 184985103 -65702751 - MIR SINE MIR -48 214 20 2295 111 7 0 chr2 184985907 184986213 -65701641 - AluSx SINE Alu -4 308 1 252 0 0 0 chr2 184986393 184986421 -65701433 + (TG)n Simple_repeat Simple_repeat 1 28 0 303 28 0 0 chr2 184989531 184989567 -65698287 + (CA)n Simple_repeat Simple_repeat 2 37 0 2338 106 0 3 chr2 184989753 184990064 -65697790 + AluSx SINE Alu 1 310 -2 2201 115 3 16 chr2 184991754 184992067 -65695787 + AluSx SINE Alu 1 309 -3 200 313 0 0 chr2 184992116 184992164 -65695690 + (CATATA)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr2 184992226 184992247 -65695607 + AT_rich Low_complexity Low_complexity 1 21 0 669 321 147 5 chr2 184992539 184992969 -65694885 - LTR16C LTR ERVL 0 491 1 1069 201 82 14 chr2 184993241 184993626 -65694228 - MER39 LTR ERV1 -3 704 261 542 216 61 27 chr2 184993597 184993740 -65694114 - MER39 LTR ERV1 -450 135 4 * 767 296 115 27 chr2 184993801 184995037 -65692817 - L1ME LINE L1 -503 5667 4311 373 284 134 45 chr2 184995062 184995801 -65692053 - L1ME LINE L1 -2658 3488 2684 264 333 19 19 chr2 184995808 184995964 -65691890 - L1ME LINE L1 -3531 2615 2460 180 176 0 0 chr2 184997562 184997596 -65690258 + CT-rich Low_complexity Low_complexity 1 34 0 832 200 6 6 chr2 184998065 184998240 -65689614 - MER5B DNA MER1_type 0 178 4 821 203 79 11 chr2 184998387 184998564 -65689290 - MER5A DNA MER1_type 0 189 1 246 284 11 23 chr2 184998590 184998678 -65689176 + MER5A DNA MER1_type 47 133 -56 225 191 85 43 chr2 185000893 185000987 -65686867 - L2 LINE L2 0 3313 3216 309 254 15 0 chr2 185002270 185002337 -65685517 - MIR SINE MIR -58 150 83 229 296 112 48 chr2 185002418 185002624 -65685230 + MLT1K LTR MaLR 212 430 -158 258 81 0 0 chr2 185002624 185002661 -65685193 + (GA)n Simple_repeat Simple_repeat 1 37 0 269 216 72 63 chr2 185002730 185002841 -65685013 + MLT1L LTR MaLR 498 609 -6 345 229 38 38 chr2 185005357 185005462 -65682392 + L2 LINE L2 3188 3292 -21 415 253 185 0 chr2 185005778 185005924 -65681930 - MER5A DNA MER1_type -3 186 14 2297 122 11 75 chr2 185006016 185006405 -65681449 + L1MA6 LINE L1 5879 6237 -63 2426 75 0 7 chr2 185006405 185006710 -65681144 + AluY SINE Alu 9 311 0 2297 122 11 75 chr2 185006710 185006771 -65681083 + L1MA6 LINE L1 6237 6300 0 520 224 42 21 chr2 185007191 185007334 -65680520 + MIR SINE MIR 89 234 -28 659 259 86 86 chr2 185008121 185008371 -65679483 + MER34 LTR ERV1 1 250 -292 450 0 0 0 chr2 185008371 185008421 -65679433 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 2017 142 0 0 chr2 185008426 185008708 -65679146 - AluSx SINE Alu -30 282 1 659 259 86 86 chr2 185008708 185008987 -65678867 + MER34 LTR ERV1 253 536 -6 650 185 15 8 chr2 185009720 185009850 -65678004 - FLAM_C SINE Alu -1 132 2 2415 88 0 22 chr2 185009903 185010221 -65677633 - AluY SINE Alu 0 311 1 2222 116 7 0 chr2 185010323 185010626 -65677228 - AluSx SINE Alu -7 305 1 329 296 62 85 chr2 185011418 185011806 -65676048 + MLT1K LTR MaLR 168 546 -42 1949 142 29 129 chr2 185013629 185013957 -65673897 - Charlie4a DNA MER1_type -1453 508 265 2105 109 36 13 chr2 185013957 185014259 -65673595 - AluSx SINE Alu -3 309 1 1949 142 29 129 chr2 185014259 185014462 -65673392 - Charlie4a DNA MER1_type -1696 265 43 216 306 89 16 chr2 185014492 185014616 -65673238 + L2 LINE L2 2578 2710 -604 1778 79 0 0 chr2 185014958 185015174 -65672680 + AluSg/x SINE Alu 85 300 -12 296 220 0 0 chr2 185015190 185015249 -65672605 + L2 LINE L2 3214 3272 0 201 147 0 0 chr2 185018188 185018222 -65669632 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 1414 165 118 18 chr2 185018236 185018515 -65669339 - AluJo SINE Alu 0 312 6 227 206 54 11 chr2 185018548 185018640 -65669214 - L1M4 LINE L1 -2919 3227 3132 2870 123 22 2 chr2 185018650 185019065 -65668789 + MSTB LTR MaLR 4 426 0 859 265 46 37 chr2 185019069 185019506 -65668348 - L1M4 LINE L1 -3053 3093 2653 948 254 134 25 chr2 185019566 185020014 -65667840 + LTR33 LTR ERVL 1 497 -24 551 287 39 28 chr2 185020040 185020133 -65667721 - L1M4 LINE L1 -3558 2588 2498 1665 201 18 26 chr2 185020133 185020476 -65667378 - MER2 DNA MER2_type -1 343 4 551 287 39 28 chr2 185020476 185020636 -65667218 - L1M4 LINE L1 -3648 2498 2332 3808 149 32 35 chr2 185020652 185020717 -65667137 - Charlie1 DNA MER1_type -1 2760 2696 1737 124 120 4 chr2 185020717 185020983 -65666871 + AluSx SINE Alu 1 297 -15 3808 149 32 35 chr2 185020983 185021640 -65666214 - Charlie1 DNA MER1_type -65 2696 2040 203 343 104 8 chr2 185021663 185021797 -65666057 + MIR SINE MIR 50 196 -66 189 0 0 0 chr2 185022862 185022883 -65664971 + (CTGGGG)n Simple_repeat Simple_repeat 2 22 0 360 0 0 0 chr2 185022996 185023036 -65664818 + (CA)n Simple_repeat Simple_repeat 2 41 0 349 331 0 29 chr2 185023950 185024089 -65663765 + MIR3 SINE MIR 35 169 -39 1749 152 0 4 chr2 185024429 185024685 -65663169 + AluJo SINE Alu 1 255 -57 238 257 0 29 chr2 185025552 185025622 -65662232 - MIR SINE MIR -71 137 69 4659 131 86 39 chr2 185025881 185026547 -65661307 + L1MC3 LINE L1 6822 7544 -241 2067 95 24 0 chr2 185026547 185026841 -65661013 + L1MA1 LINE L1 6002 6302 0 4659 131 86 39 chr2 185026841 185027095 -65660759 + L1MC3 LINE L1 7544 7785 0 204 275 166 85 chr2 185027547 185027794 -65660060 - L2 LINE L2 -1 3312 3046 510 285 65 5 chr2 185028314 185028528 -65659326 - L2 LINE L2 -222 3050 2824 390 272 250 4 chr2 185028545 185028777 -65659077 + L2 LINE L2 2316 2604 -710 268 245 159 33 chr2 185029177 185029328 -65658526 + MIR3 SINE MIR 1 170 -38 246 306 0 0 chr2 185029940 185030002 -65657852 - L2 LINE L2 -5 3267 3206 242 218 115 0 chr2 185030166 185030253 -65657601 - L2 LINE L2 -345 2968 2872 2288 110 3 0 chr2 185030399 185030700 -65657154 - AluSc SINE Alu -7 302 1 297 299 140 34 chr2 185030988 185031489 -65656365 - HAL1 LINE L1 -1876 631 78 249 293 157 37 chr2 185031544 185031735 -65656119 - MIR SINE MIR -47 215 2 799 158 0 0 chr2 185031900 185032027 -65655827 + FLAM_C SINE Alu 1 127 -6 1154 223 67 51 chr2 185032697 185033284 -65654570 - LTR48 LTR ERV1 0 787 1 3453 164 68 36 chr2 185034687 185035381 -65652473 - MER21B LTR ERV1 -3 860 145 276 108 0 0 chr2 185035412 185035449 -65652405 - MER21B LTR ERV1 -826 37 1 333 268 249 5 chr2 185035793 185035998 -65651856 + MIR SINE MIR 8 262 0 * 375 278 75 15 chr2 185035990 185036123 -65651731 - MIR SINE MIR -107 155 15 372 249 133 58 chr2 185036189 185036603 -65651251 - MER65A LTR ERV1 0 445 1 805 229 0 0 chr2 185037712 185037869 -65649985 - FRAM SINE Alu -6 170 14 824 192 54 27 chr2 185038002 185038226 -65649628 - L1MC5 LINE L1 -36 7925 7696 560 201 111 55 chr2 185038486 185038685 -65649169 - L1ME2 LINE L1 -9 6155 5946 189 0 0 0 chr2 185038956 185038977 -65648877 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 1860 158 0 10 chr2 185039574 185039878 -65647976 + AluJb SINE Alu 1 301 -11 23 0 0 0 chr2 185039913 185039936 -65647918 + AT_rich Low_complexity Low_complexity 1 23 0 306 231 13 21 chr2 185040159 185040403 -65647451 + (TA)n Simple_repeat Simple_repeat 1 241 0 214 267 171 9 chr2 185040511 185040616 -65647238 + MIR SINE MIR 91 212 -50 388 165 0 82 chr2 185040637 185040698 -65647156 + L1M1 LINE L1 5734 5786 -518 351 0 0 0 chr2 185040698 185040737 -65647117 + (CA)n Simple_repeat Simple_repeat 2 40 0 388 165 0 82 chr2 185040737 185040772 -65647082 + L1M1 LINE L1 5786 5822 -482 197 213 43 0 chr2 185040798 185040845 -65647009 + L2 LINE L2 3224 3272 0 1622 183 25 4 chr2 185041293 185041567 -65646287 - AluJb SINE Alu -32 280 1 315 254 159 14 chr2 185041834 185041972 -65645882 + MIR SINE MIR 70 227 -35 1962 154 37 17 chr2 185042979 185043354 -65644500 + MER1B DNA MER1_type 2 339 0 662 301 17 21 chr2 185043833 185044069 -65643785 + MIR SINE MIR 1 235 -27 893 293 67 7 chr2 185044522 185044955 -65642899 - L1ME2 LINE L1 -217 5953 5495 2008 116 48 0 chr2 185045295 185045587 -65642267 + AluSx SINE Alu 1 306 -6 563 259 124 50 chr2 185045666 185046200 -65641654 - L1P4 LINE L1 -705 5461 4881 881 288 101 29 chr2 185046220 185046852 -65641002 - L1ME2 LINE L1 -1397 4749 4072 265 238 143 65 chr2 185046872 185047040 -65640814 - MIR SINE MIR -57 205 25 194 250 62 0 chr2 185047095 185047143 -65640711 - L2 LINE L2 0 3272 3222 2041 112 45 0 chr2 185047729 185048015 -65639839 - AluY SINE Alu -12 299 1 1320 328 114 28 chr2 185048797 185049905 -65637949 + L2 LINE L2 1744 2946 -368 582 133 114 0 chr2 185049908 185050013 -65637841 + ORSL DNA AcHobo 2 118 -157 3060 173 30 40 chr2 185050081 185050712 -65637142 - L1MB5 LINE L1 -6 6294 5710 2351 117 68 34 chr2 185050712 185051064 -65636790 + THE1B LTR MaLR 1 364 0 3060 173 30 40 chr2 185051064 185051153 -65636701 - L1MB5 LINE L1 -590 5710 5622 578 174 18 9 chr2 185051153 185051262 -65636592 + ORSL DNA AcHobo 165 274 -1 673 122 0 0 chr2 185051558 185051648 -65636206 - FRAM SINE Alu -25 151 62 1723 119 0 169 chr2 185051960 185052320 -65635534 + AluJo SINE Alu 1 299 -3 425 273 7 7 chr2 185053425 185053575 -65634279 - MER113 DNA MER1_type? -357 164 15 302 312 70 28 chr2 185054148 185054363 -65633491 + L2 LINE L2 2825 3048 -224 605 118 43 0 chr2 185055312 185055405 -65632449 - MER103 DNA DNA -58 108 12 273 299 11 11 chr2 185055861 185055948 -65631906 - MIR3 SINE MIR -1 207 121 1086 187 20 5 chr2 185057319 185057517 -65630337 - MLT1A1 LTR MaLR -164 201 1 376 204 65 37 chr2 185057517 185057625 -65630229 + LTR16A LTR ERVL 132 242 -208 544 324 40 0 chr2 185057633 185057809 -65630045 + HERV16 LTR ERVL 418 600 -4396 1091 263 13 58 chr2 185057943 185058255 -65629599 + HERV16 LTR ERVL 1650 1947 -3049 2741 293 43 34 chr2 185058275 185059155 -65628699 + HERV16 LTR ERVL 2120 3007 -1989 331 105 0 53 chr2 185059155 185059212 -65628642 - MLT2A2 LTR ERVL 0 453 400 349 209 52 23 chr2 185059220 185059392 -65628462 + (TATAA)n Simple_repeat Simple_repeat 3 179 0 225 281 123 44 chr2 185060424 185060538 -65627316 + L2 LINE L2 3190 3312 -1 2711 118 3 3 chr2 185061532 185061896 -65625958 - THE1B LTR MaLR 0 364 1 10603 99 16 63 chr2 185061896 185063553 -65624301 - THE1B-int LTR MaLR 0 1580 1 2314 123 73 3 chr2 185063553 185063893 -65623961 - THE1B LTR MaLR 0 364 1 446 287 134 0 chr2 185064018 185064182 -65623672 - MER91A DNA MER1_type -10 186 1 4462 227 157 27 chr2 185065143 185066554 -65621300 - L1MD3 LINE L1 -5 7990 6397 1009 301 71 26 chr2 185066554 185066936 -65620918 - MLT1K LTR MaLR -167 421 23 2295 87 0 32 chr2 185067103 185067413 -65620441 + AluSg SINE Alu 1 300 -10 347 326 86 5 chr2 185069362 185069549 -65618305 + MIR SINE MIR 20 221 -41 2057 142 0 0 chr2 185069608 185069897 -65617957 - AluSx SINE Alu -23 289 1 829 151 7 20 chr2 185071134 185071280 -65616574 - FAM SINE Alu -8 41 1 745 298 113 19 chr2 185073254 185073616 -65614238 + MLT1J LTR MaLR 108 503 -8 1791 161 0 16 chr2 185073646 185073956 -65613898 - AluJo SINE Alu -7 305 1 905 223 48 0 chr2 185074712 185074953 -65612901 + L2 LINE L2 2750 2998 -315 361 305 58 26 chr2 185075105 185075259 -65612595 - MIR3 SINE MIR -16 192 34 24 0 0 0 chr2 185075807 185075831 -65612023 + AT_rich Low_complexity Low_complexity 1 24 0 415 231 151 84 chr2 185076223 185076448 -65611406 - MIR SINE MIR -12 250 11 752 216 0 0 chr2 185077472 185077597 -65610257 - FLAM_A SINE Alu -8 125 1 23 33 0 0 chr2 185077714 185077744 -65610110 + AT_rich Low_complexity Low_complexity 1 30 0 838 232 12 0 chr2 185077830 185077994 -65609860 - FAM SINE Alu -9 166 1 294 208 0 0 chr2 185078108 185078161 -65609693 + MER74B LTR ERVL 1 53 -569 1239 234 43 20 chr2 185078193 185078586 -65609268 + MER74B LTR ERVL 211 612 -10 2194 124 0 0 chr2 185078723 185079021 -65608833 + AluSx SINE Alu 1 298 -14 750 236 179 44 chr2 185079329 185079736 -65608118 - L2 LINE L2 0 3313 2852 1690 265 107 64 chr2 185079978 185080279 -65607575 - HAL1 LINE L1 -1 2506 2219 1290 185 113 58 chr2 185080279 185080625 -65607229 - MLT1A1 LTR MaLR 0 365 1 1690 265 107 64 chr2 185080625 185080667 -65607187 - HAL1 LINE L1 -288 2219 2180 2000 135 7 0 chr2 185080667 185080956 -65606898 + AluSx SINE Alu 3 293 -19 1690 265 107 64 chr2 185080956 185081408 -65606446 - HAL1 LINE L1 -327 2180 1652 2002 114 32 0 chr2 185081408 185081689 -65606165 - AluSg SINE Alu -20 290 1 1690 265 107 64 chr2 185081689 185081947 -65605907 - HAL1 LINE L1 -855 1652 1406 1195 162 28 19 chr2 185082162 185082378 -65605476 + MER20 DNA MER1_type 2 219 0 193 250 0 21 chr2 185082500 185082548 -65605306 - L2 LINE L2 -8 3305 3259 339 331 52 7 chr2 185082823 185082959 -65604895 + MER5A DNA MER1_type 48 189 0 824 235 91 5 chr2 185083070 185083291 -65604563 + MIR SINE MIR 7 246 -16 415 257 5 48 chr2 185083474 185083661 -65604193 + (CA)n Simple_repeat Simple_repeat 2 180 0 204 163 0 0 chr2 185083675 185083718 -65604136 + (CA)n Simple_repeat Simple_repeat 1 43 0 584 249 52 6 chr2 185084573 185084746 -65603108 + MIR SINE MIR 82 262 0 2133 101 16 38 chr2 185086447 185086764 -65601090 - AluSg SINE Alu 0 310 1 845 108 0 89 chr2 185088053 185088210 -65599644 - L1MB8 LINE L1 -8 6170 6028 319 211 22 44 chr2 185088226 185088316 -65599538 - L1MB5 LINE L1 -141 6033 5946 2134 134 0 6 chr2 185088521 185088835 -65599019 - AluSx SINE Alu 0 312 1 213 283 17 0 chr2 185089269 185089329 -65598525 - MIR3 SINE MIR -4 204 144 551 241 86 12 chr2 185089329 185089491 -65598363 - MLT1A2 LTR MaLR 0 390 217 25 0 0 0 chr2 185089708 185089733 -65598121 + AT_rich Low_complexity Low_complexity 1 25 0 872 179 18 103 chr2 185089764 185089987 -65597867 - MLT1A2 LTR MaLR -170 204 1 226 277 36 48 chr2 185092068 185092151 -65595703 - L2 LINE L2 -10 3303 3222 192 191 64 0 chr2 185092948 185092995 -65594859 + L2 LINE L2 3264 3313 0 181 335 77 57 chr2 185094535 185094729 -65593125 - L2 LINE L2 -40 3232 3035 * 369 338 14 14 chr2 185094725 185094864 -65592990 + MIR3 SINE MIR 34 172 -36 265 253 24 36 chr2 185096126 185096209 -65591645 + CT-rich Low_complexity Low_complexity 4 85 0 944 126 6 4 chr2 185096187 185096503 -65591351 + (TTCC)n Simple_repeat Simple_repeat 3 490 0 859 137 11 0 chr2 185096516 185096691 -65591163 + CT-rich Low_complexity Low_complexity 4 180 0 992 128 6 0 chr2 185096702 185096881 -65590973 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 204 254 0 0 chr2 185096882 185096941 -65590913 + T-rich Low_complexity Low_complexity 2 60 0 2472 64 3 10 chr2 185097505 185097818 -65590036 - AluY SINE Alu 0 311 1 216 0 0 0 chr2 185098369 185098393 -65589461 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 323 288 86 60 chr2 185099067 185099369 -65588485 + L1MC4a LINE L1 4748 5057 -1089 489 319 93 54 chr2 185099399 185100064 -65587790 + L1MC4a LINE L1 5389 6079 -1729 1551 157 14 7 chr2 185100128 185100414 -65587440 + L1 LINE L1 5116 5403 -743 207 269 0 0 chr2 185100821 185100873 -65586981 + T-rich Low_complexity Low_complexity 4 55 0 340 314 9 19 chr2 185101060 185101165 -65586689 + MIR SINE MIR 11 114 -148 191 277 34 84 chr2 185101402 185101521 -65586333 - MIR3 SINE MIR -84 124 12 749 259 141 64 chr2 185101873 185102012 -65585842 - L1ME4a LINE L1 -9 6112 5985 1838 148 17 7 chr2 185102012 185102303 -65585551 + AluSx SINE Alu 1 294 -18 749 259 141 64 chr2 185102303 185102405 -65585449 - L1ME4a LINE L1 -136 5985 5892 1980 140 3 35 chr2 185102405 185102583 -65585271 - AluJo SINE Alu -7 305 140 2427 71 10 0 chr2 185102583 185102891 -65584963 - AluY SINE Alu 0 311 1 1980 140 3 35 chr2 185102891 185103027 -65584827 - AluJo SINE Alu -172 140 1 749 259 141 64 chr2 185103027 185103581 -65584273 - L1ME4a LINE L1 -229 5892 5255 8187 26 0 0 chr2 185103814 185105126 -65582728 + L1PA4 LINE L1 4841 6152 -3 2009 132 0 0 chr2 185105147 185105428 -65582426 - AluSx SINE Alu -31 281 1 506 275 191 26 chr2 185105476 185105751 -65582103 - L1ME1 LINE L1 -229 5937 5592 2212 151 19 16 chr2 185105751 185106115 -65581739 - MLT1A1 LTR MaLR 0 365 1 506 275 191 26 chr2 185106115 185106184 -65581670 - L1ME1 LINE L1 -574 5592 5536 22 0 0 0 chr2 185106303 185106325 -65581529 + AT_rich Low_complexity Low_complexity 1 22 0 346 324 61 33 chr2 185106336 185106549 -65581305 - L1ME1 LINE L1 -1312 4834 4616 2722 216 80 53 chr2 185106599 185106769 -65581085 - L1ME3A LINE L1 -71 6168 6004 6477 112 23 20 chr2 185106769 185108604 -65579250 - L1PA15 LINE L1 -3 6162 4332 2722 216 80 53 chr2 185108604 185109569 -65578285 - L1ME3A LINE L1 -235 6004 4992 1135 162 11 35 chr2 185109579 185109845 -65578009 - AluJb SINE Alu -13 299 2 554 276 31 0 chr2 185109852 185110015 -65577839 - L1ME3A LINE L1 -1229 4986 4819 2103 270 81 14 chr2 185110017 185111153 -65576701 - L1MEc LINE L1 -3137 3078 1918 329 215 70 108 chr2 185111191 185111405 -65576449 - L1MC4 LINE L1 -1 8041 7836 2039 237 64 32 chr2 185111445 185112010 -65575844 - L1ME2 LINE L1 -10 6154 5572 875 254 61 11 chr2 185112016 185112295 -65575559 - L1ME2 LINE L1 -3500 2646 2354 590 272 98 0 chr2 185113647 185113668 -65574186 - HAL1 LINE L1 -1575 932 914 204 40 0 0 chr2 185113668 185113693 -65574161 + (TG)n Simple_repeat Simple_repeat 2 26 0 590 272 98 0 chr2 185113693 185113844 -65574010 - HAL1 LINE L1 -1593 914 743 559 234 8 0 chr2 185113844 185113968 -65573886 - MER119 DNA MER1_type -4 579 455 555 280 56 0 chr2 185113969 185114094 -65573760 - MER119 DNA MER1_type -449 134 3 1353 296 101 42 chr2 185114875 185115526 -65572328 - HAL1 LINE L1 -1806 701 12 204 285 73 88 chr2 185115528 185115665 -65572189 - L2 LINE L2 0 3272 3138 220 156 0 44 chr2 185116813 185116858 -65570996 + GA-rich Low_complexity Low_complexity 4 46 0 471 157 102 37 chr2 185118147 185118255 -65569599 - L1MA6 LINE L1 -4 6296 6182 * 2465 128 8 5 chr2 185118254 185118645 -65569209 + L1M2 LINE L1 5383 5774 -526 292 323 71 49 chr2 185120389 185120615 -65567239 - L2 LINE L2 -8 3264 3034 357 264 38 19 chr2 185121086 185121192 -65566662 - L2 LINE L2 -3 3310 3203 252 204 19 19 chr2 185121492 185121546 -65566308 + MLT1K LTR MaLR 183 236 -352 212 304 157 17 chr2 185121783 185121898 -65565956 - L2 LINE L2 0 3272 3142 728 271 71 55 chr2 185123267 185124179 -65563675 - L1MC5 LINE L1 -91 7951 7029 1152 146 0 0 chr2 185124193 185124357 -65563497 + AluJb SINE Alu 135 298 -14 2540 45 0 0 chr2 185124932 185125223 -65562631 + AluY SINE Alu 2 292 -19 375 366 132 0 chr2 185126085 185126298 -65561556 + MIR SINE MIR 7 247 -15 460 231 34 17 chr2 185126319 185126436 -65561418 - L2 LINE L2 -620 2694 2576 507 219 155 32 chr2 185126498 185126685 -65561169 - MIR SINE MIR -10 252 43 487 253 43 56 chr2 185127738 185127900 -65559954 - MIR SINE MIR -40 222 63 204 97 0 0 chr2 185128891 185128922 -65558932 + (A)n Simple_repeat Simple_repeat 1 31 0 43901 31 21 2 chr2 185129205 185135240 -65552614 + L1PA2 LINE L1 1 6155 0 21 95 0 0 chr2 185135440 185135503 -65552351 + AT_rich Low_complexity Low_complexity 1 63 0 22 56 0 0 chr2 185135536 185135572 -65552282 + AT_rich Low_complexity Low_complexity 1 36 0 203 189 0 0 chr2 185135646 185135683 -65552171 + T-rich Low_complexity Low_complexity 1 37 0 734 201 3 0 chr2 185136153 185136477 -65551377 + (ATG)n Simple_repeat Simple_repeat 1 325 0 716 172 0 6 chr2 185136508 185136688 -65551166 + (ATG)n Simple_repeat Simple_repeat 1 179 0 495 228 0 0 chr2 185136699 185136879 -65550975 + (ATG)n Simple_repeat Simple_repeat 1 180 0 569 307 14 24 chr2 185137146 185137358 -65550496 - MIR SINE MIR -40 222 13 455 324 43 5 chr2 185137638 185137823 -65550031 + MIR3 SINE MIR 11 202 -6 278 300 89 0 chr2 185139040 185139130 -65548724 - L2 LINE L2 -36 3236 3139 5692 93 6 4 chr2 185139555 185140350 -65547504 - L1PB2 LINE L1 -3 6148 5352 724 173 0 0 chr2 185140488 185140598 -65547256 + FRAM SINE Alu 41 150 -26 1959 76 0 69 chr2 185140599 185140888 -65546966 + L1PA10 LINE L1 5896 6164 -4 22 0 0 0 chr2 185140908 185140930 -65546924 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 185142017 185142039 -65545815 + AT_rich Low_complexity Low_complexity 1 22 0 201 261 0 0 chr2 185142397 185142443 -65545411 + (TG)n Simple_repeat Simple_repeat 1 46 0 2383 78 0 13 chr2 185142702 185143008 -65544846 - AluSx SINE Alu -10 302 1 1434 6 0 0 chr2 185143036 185143192 -65544662 + AluYb8 SINE Alu 163 318 0 545 236 27 89 chr2 185143195 185143420 -65544434 - L1MC5 LINE L1 -27 7934 7724 2335 78 0 0 chr2 185144818 185145111 -65542743 + AluY SINE Alu 1 293 -18 585 283 153 9 chr2 185145255 185145478 -65542376 + MIR SINE MIR 1 255 -7 23 0 0 0 chr2 185146164 185146187 -65541667 + AT_rich Low_complexity Low_complexity 1 23 0 1713 163 14 22 chr2 185146187 185146464 -65541390 - AluJb SINE Alu -21 291 17 1883 140 43 0 chr2 185146467 185146746 -65541108 + AluSc SINE Alu 1 291 -18 1231 265 106 10 chr2 185147750 185148154 -65539700 - MER39 LTR ERV1 0 707 265 2060 240 102 42 chr2 185148436 185149170 -65538684 - MER20B DNA MER1_type 0 783 6 2896 84 5 41 chr2 185150860 185151275 -65536579 - L1MA2 LINE L1 0 6304 5905 367 233 47 0 chr2 185151501 185151587 -65536267 - MLT1H1 LTR MaLR 0 555 466 660 237 160 72 chr2 185151780 185151929 -65535925 + Charlie8 DNA MER1_type 7 141 -2276 442 116 0 0 chr2 185151929 185151998 -65535856 + L1PA14 LINE L1 6091 6159 -2 660 237 160 72 chr2 185151998 185152211 -65535643 + Charlie8 DNA MER1_type 141 401 -2016 340 145 48 0 chr2 185152307 185152369 -65535485 + Charlie8 DNA MER1_type 255 2406 -11 1186 242 147 9 chr2 185152563 185152689 -65535165 + MLT1G1 LTR MaLR 15 122 -473 2376 135 53 0 chr2 185152689 185153045 -65534809 + THE1C LTR MaLR 1 375 0 1186 242 147 9 chr2 185153045 185153367 -65534487 + MLT1G1 LTR MaLR 122 584 -11 1171 301 78 38 chr2 185153392 185153943 -65533911 + MLT1K LTR MaLR 14 586 -2 4606 197 40 38 chr2 185153996 185154431 -65533423 - L1MC4 LINE L1 0 8042 7609 2073 139 85 62 chr2 185154431 185154818 -65533036 - MSTD LTR MaLR 0 396 1 4606 197 40 38 chr2 185154818 185155483 -65532371 - L1MC4 LINE L1 -433 7609 6940 760 284 44 9 chr2 185155499 185155724 -65532130 + MIR SINE MIR 13 245 -17 1021 131 0 16 chr2 185156157 185156166 -65531688 + (TTCC)n Simple_repeat Simple_repeat 1 188 0 1021 131 0 16 chr2 185156166 185156349 -65531505 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 233 380 16 0 chr2 185156592 185156713 -65531141 + L2 LINE L2 2587 2709 -605 285 293 268 30 chr2 185156834 185157032 -65530822 - MIR SINE MIR -10 252 8 611 339 136 26 chr2 185157504 185158153 -65529701 + L2 LINE L2 1380 2099 -1215 26 0 0 0 chr2 185158164 185158190 -65529664 + AT_rich Low_complexity Low_complexity 1 26 0 6509 90 66 3 chr2 185158190 185159303 -65528551 - L1PA10 LINE L1 -3 6165 5017 2654 150 94 2 chr2 185159757 185160171 -65527683 + LTR47A LTR ERVL 1 452 0 381 22 0 0 chr2 185160171 185160217 -65527637 + (TG)n Simple_repeat Simple_repeat 1 46 0 247 146 0 24 chr2 185160929 185160970 -65526884 - MLT1L LTR MaLR 0 615 576 537 359 51 9 chr2 185161062 185161377 -65526477 - LTR16C LTR ERVL 0 491 164 335 236 98 24 chr2 185161689 185161812 -65526042 - L1MC4a LINE L1 -1470 6338 6207 250 235 0 61 chr2 185161980 185162095 -65525759 + L1MC4a LINE L1 5256 5363 -2445 405 147 15 0 chr2 185162109 185162177 -65525677 + L1MC4a LINE L1 5420 5488 -2320 * 421 270 126 3 chr2 185162161 185162363 -65525491 + L1MC4a LINE L1 5721 5897 -1911 207 0 0 0 chr2 185162363 185162386 -65525468 + (TG)n Simple_repeat Simple_repeat 2 24 0 421 270 126 3 chr2 185162386 185162544 -65525310 + L1MC4a LINE L1 5897 6172 -1636 468 257 37 22 chr2 185162553 185162689 -65525165 + L1MA10 LINE L1 6183 6320 -14 22 56 0 0 chr2 185162746 185162782 -65525072 + AT_rich Low_complexity Low_complexity 1 36 0 740 279 152 22 chr2 185162783 185163059 -65524795 + MLT1G1 LTR MaLR 1 312 -283 * 1215 141 173 5 chr2 185163034 185163254 -65524600 - LTR47A LTR ERVL -195 257 1 804 275 92 8 chr2 185163404 185163644 -65524210 + MLT1G1 LTR MaLR 332 591 -4 350 233 86 58 chr2 185163648 185163824 -65524030 + MLT1G1-int LTR MaLR 1 181 -1229 22 35 0 0 chr2 185164230 185164259 -65523595 + AT_rich Low_complexity Low_complexity 1 29 0 248 380 39 0 chr2 185164311 185164490 -65523364 + MLT1G1-int LTR MaLR 699 884 -487 342 318 32 92 chr2 185164680 185164897 -65522957 + MLT1G1-int LTR MaLR 1022 1225 -146 676 175 9 0 chr2 185164908 185165022 -65522832 - L1ME LINE L1 -486 5680 5566 1461 266 80 43 chr2 185165157 185165695 -65522159 + MLT1G1 LTR MaLR 1 558 -37 2594 232 49 21 chr2 185165728 185166443 -65521411 - L1ME1 LINE L1 -4 6162 5428 191 36 36 0 chr2 185168405 185168433 -65519421 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 210 91 0 0 chr2 185170397 185170430 -65517424 + (GGA)n Simple_repeat Simple_repeat 2 34 0 391 344 5 60 chr2 185170509 185170654 -65517200 - L2 LINE L2 -187 3085 2954 1998 280 57 54 chr2 185170654 185171344 -65516510 - MER115 DNA AcHobo -1 692 1 391 344 5 60 chr2 185171344 185171416 -65516438 - L2 LINE L2 -318 2954 2880 210 71 0 0 chr2 185173022 185173050 -65514804 + (T)n Simple_repeat Simple_repeat 1 28 0 353 291 58 0 chr2 185174212 185174315 -65513539 - L2 LINE L2 -8 3305 3197 195 42 0 0 chr2 185175366 185175390 -65512464 + (A)n Simple_repeat Simple_repeat 1 24 0 2367 72 0 7 chr2 185176839 185177132 -65510722 - AluY SINE Alu -20 291 1 314 277 116 9 chr2 185177709 185177821 -65510033 - L2 LINE L2 0 3313 3190 685 225 138 14 chr2 185178017 185178235 -65509619 - MER102a DNA MER1_type -14 316 72 834 253 49 30 chr2 185178241 185178546 -65509308 + L1MC4a LINE L1 5661 5971 -1837 205 282 0 29 chr2 185178579 185178682 -65509172 + (TA)n Simple_repeat Simple_repeat 2 101 0 992 268 60 60 chr2 185179912 185180408 -65507446 - LTR33 LTR ERVL 0 521 26 38 39 0 0 chr2 185180662 185180714 -65507140 + AT_rich Low_complexity Low_complexity 1 52 0 1918 204 13 0 chr2 185182497 185182870 -65504984 + L1PA16 LINE L1 5768 6145 -21 334 272 48 29 chr2 185183244 185183347 -65504507 + L2 LINE L2 3156 3260 -12 193 210 40 110 chr2 185183742 185183842 -65504012 + MIR3 SINE MIR 108 200 -8 1529 180 3 62 chr2 185183972 185184295 -65503559 - AluJo SINE Alu -8 304 1 219 263 53 53 chr2 185185512 185185607 -65502247 - MIR SINE MIR -55 207 113 976 175 143 0 chr2 185187358 185187547 -65500307 + MER58A DNA MER1_type 3 218 -6 468 188 222 28 chr2 185187611 185187755 -65500099 - MLT1G LTR MaLR 0 590 419 215 77 0 26 chr2 185187785 185187824 -65500030 + (TC)n Simple_repeat Simple_repeat 1 38 0 676 250 34 17 chr2 185187971 185188147 -65499707 - MLT1G1 LTR MaLR -415 180 2 17444 118 19 42 chr2 185188798 185191594 -65496260 - Tigger4(Zombi) DNA MER2_type 0 2731 1 464 48 16 0 chr2 185192163 185192226 -65495628 + (CA)n Simple_repeat Simple_repeat 2 65 0 198 0 0 0 chr2 185193604 185193626 -65494228 + (TG)n Simple_repeat Simple_repeat 1 22 0 191 88 29 0 chr2 185193626 185193660 -65494194 + (GA)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 185194009 185194030 -65493824 + AT_rich Low_complexity Low_complexity 1 21 0 372 286 191 0 chr2 185194106 185194284 -65493570 - MIR SINE MIR -49 213 2 220 292 15 0 chr2 185195056 185195121 -65492733 + GA-rich Low_complexity Low_complexity 2 67 0 6439 222 84 36 chr2 185195254 185197314 -65490540 - L1ME1 LINE L1 -8 6227 4267 3599 102 17 20 chr2 185197314 185197856 -65489998 - L1MA5A LINE L1 -5 6292 5753 6439 222 84 36 chr2 185197856 185198347 -65489507 - L1ME1 LINE L1 -1968 4267 3801 2106 92 0 0 chr2 185198347 185198609 -65489245 + AluSx SINE Alu 29 290 -22 6439 222 84 36 chr2 185198609 185199315 -65488539 - L1ME1 LINE L1 -2434 3801 3130 2215 192 8 6 chr2 185199315 185199679 -65488175 + MLT1A1 LTR MaLR 1 365 0 6439 222 84 36 chr2 185199679 185200443 -65487411 - L1ME1 LINE L1 -3105 3130 2072 4229 263 65 46 chr2 185200447 185200931 -65486923 - L1ME1 LINE L1 -4527 1869 1396 2566 68 0 0 chr2 185200931 185201242 -65486612 - AluY SINE Alu 0 311 1 4229 263 65 46 chr2 185201242 185202452 -65485402 - L1ME1 LINE L1 -5000 1396 142 902 141 82 0 chr2 185202467 185202638 -65485216 - AluSg/x SINE Alu 0 316 135 390 252 9 17 chr2 185202639 185202754 -65485100 - L1ME1 LINE L1 -6261 135 22 531 345 11 7 chr2 185202805 185203089 -65484765 - L1ME4a LINE L1 -281 5840 5556 1076 160 0 0 chr2 185203883 185204039 -65483815 + AluSg/x SINE Alu 135 290 -22 21 0 0 0 chr2 185204176 185204197 -65483657 + GC_rich Low_complexity Low_complexity 1 21 0 2309 84 0 13 chr2 185204371 185204682 -65483172 - AluY SINE Alu -4 307 1 482 229 48 63 chr2 185204777 185204971 -65482883 + MIR SINE MIR 7 200 -62 520 279 96 68 chr2 185205678 185205884 -65481970 + L2 LINE L2 2813 3029 -284 1876 149 7 0 chr2 185205884 185206179 -65481675 + AluJb SINE Alu 1 297 -15 520 279 96 68 chr2 185206179 185206223 -65481631 + L2 LINE L2 3029 3070 -243 1019 189 42 14 chr2 185206307 185206519 -65481335 - MER63C DNA MER1_type 0 930 713 1050 156 19 24 chr2 185206520 185206725 -65481129 - MER20 DNA MER1_type -14 205 2 2292 225 102 2 chr2 185206726 185207303 -65480551 - MER63C DNA MER1_type -236 694 60 305 156 111 22 chr2 185207316 185207406 -65480448 - MER63C DNA MER1_type -821 109 12 444 254 63 63 chr2 185207422 185207548 -65480306 - L2 LINE L2 -1 3312 3187 301 170 19 123 chr2 185207558 185207664 -65480190 + L2 LINE L2 3121 3215 -98 1459 78 122 0 chr2 185208865 185209070 -65478784 - MER30 DNA MER1_type 0 230 1 1345 255 115 61 chr2 185210254 185210957 -65476897 + MER20B DNA MER1_type 43 783 0 909 233 41 93 chr2 185212467 185212927 -65474927 - MLT1G LTR MaLR -73 482 32 1692 180 17 13 chr2 185213318 185213618 -65474236 - AluJb SINE Alu -11 301 1 432 0 0 0 chr2 185213680 185213728 -65474126 + (TCCA)n Simple_repeat Simple_repeat 3 50 0 2169 119 0 0 chr2 185214372 185214674 -65473180 + AluSg SINE Alu 2 303 -7 2213 108 6 16 chr2 185215567 185215883 -65471971 + AluSp SINE Alu 1 313 0 784 372 9 0 chr2 185216582 185216907 -65470947 + ERVL LTR ERVL 3471 3798 -1966 192 176 15 88 chr2 185216908 185216976 -65470878 + L3 LINE CR1 1446 1508 -69 327 260 30 20 chr2 185217089 185217189 -65470665 + ERVL LTR ERVL 4032 4132 -1632 360 290 22 29 chr2 185217194 185217332 -65470522 + ERVL LTR ERVL 4926 5062 -702 1913 174 105 14 chr2 185217470 185217833 -65470021 + MSTD LTR MaLR 1 396 0 331 326 51 7 chr2 185218260 185218398 -65469456 - MIR3 SINE MIR -46 162 19 699 231 103 30 chr2 185218762 185218965 -65468889 + MIR SINE MIR 13 230 -32 185 375 11 0 chr2 185219431 185219519 -65468335 - MER5A DNA MER1_type 0 189 101 2005 117 29 0 chr2 185219642 185219935 -65467919 + AluSx SINE Alu 1 301 0 197 326 0 0 chr2 185219941 185219987 -65467867 + MER5A DNA MER1_type 144 189 0 870 275 160 9 chr2 185220675 185221112 -65466742 + L1MC4a LINE L1 5382 5884 -1924 891 218 32 32 chr2 185221119 185221339 -65466515 - MIR SINE MIR -30 232 13 25 0 0 0 chr2 185221721 185221746 -65466108 + AT_rich Low_complexity Low_complexity 1 25 0 605 206 51 89 chr2 185222901 185223115 -65464739 + MIR SINE MIR 7 212 -50 224 119 0 24 chr2 185224641 185224683 -65463171 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 304 327 115 0 chr2 185225160 185225264 -65462590 + MIR3 SINE MIR 84 199 -9 197 162 54 0 chr2 185225930 185225967 -65461887 + L2 LINE L2 3017 3055 -217 222 309 46 13 chr2 185226222 185226374 -65461480 + MER5B DNA MER1_type 20 176 -2 388 186 85 39 chr2 185226501 185226630 -65461224 + L1ME LINE L1 5567 5701 -420 231 254 48 0 chr2 185226651 185226714 -65461140 + L1ME LINE L1 5754 5819 -302 858 267 111 0 chr2 185228507 185228732 -65459122 - MIR SINE MIR -1 261 12 1959 148 37 34 chr2 185230154 185230506 -65457348 + THE1B LTR MaLR 2 354 -10 289 299 30 60 chr2 185231243 185231377 -65456477 - MIR3 SINE MIR -37 171 42 297 258 0 72 chr2 185231388 185231485 -65456369 + MIR3 SINE MIR 112 201 -7 5298 174 15 72 chr2 185231846 185232554 -65455300 - MER45B DNA AcHobo -541 1040 415 1989 161 0 0 chr2 185232554 185232864 -65454990 + AluSx SINE Alu 1 310 -2 5298 174 15 72 chr2 185232864 185233257 -65454597 - MER45B DNA AcHobo -1166 415 1 5794 45 3 1 chr2 185233673 185234337 -65453517 + L1PA8 LINE L1 5508 6172 0 3804 228 38 36 chr2 185235269 185236653 -65451201 + L1ME1 LINE L1 4795 6334 0 202 252 46 13 chr2 185237117 185237268 -65450586 + (TA)n Simple_repeat Simple_repeat 1 156 0 862 273 21 21 chr2 185237978 185238216 -65449638 + MIR SINE MIR 2 239 -23 5034 155 11 16 chr2 185238563 185240077 -65447777 - L1MA7 LINE L1 -172 6119 4613 317 290 61 15 chr2 185240301 185240432 -65447422 - MIR SINE MIR -3 259 123 2077 157 146 11 chr2 185240432 185240809 -65447045 + MSTA LTR MaLR 1 428 0 9685 132 18 65 chr2 185240811 185242467 -65445387 + MSTA-int LTR MaLR 3 1580 0 1449 170 186 16 chr2 185242467 185242785 -65445069 + MSTA LTR MaLR 1 372 -56 4244 205 72 20 chr2 185242803 185242920 -65444934 + L1MC4 LINE L1 6951 7060 -982 180 77 0 0 chr2 185242920 185242946 -65444908 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 4244 205 72 20 chr2 185242946 185243866 -65443988 + L1MC4 LINE L1 7060 8042 0 255 341 56 24 chr2 185244033 185244159 -65443695 + L2 LINE L2 3142 3271 -1 588 291 109 5 chr2 185244949 185245159 -65442695 - MIR SINE MIR -2 260 29 216 329 121 44 chr2 185246317 185246682 -65441172 + L3b LINE CR1 1106 1498 -85 2159 28 45 0 chr2 185247164 185247411 -65440443 + L1PA8 LINE L1 5912 6169 -3 32 43 0 0 chr2 185247980 185248026 -65439828 + AT_rich Low_complexity Low_complexity 1 46 0 231 36 0 0 chr2 185248107 185248135 -65439719 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 1958 118 4 7 chr2 185248137 185248416 -65439438 - AluSx SINE Alu -34 278 1 411 211 44 35 chr2 185249703 185249817 -65438037 - MIR SINE MIR -10 252 138 297 222 148 65 chr2 185250242 185250350 -65437504 - MIR SINE MIR -114 148 32 410 294 113 31 chr2 185250777 185250937 -65436917 + MIR SINE MIR 28 200 -62 182 285 192 31 chr2 185251595 185251725 -65436129 - L2 LINE L2 0 3272 3122 290 239 45 45 chr2 185252805 185252893 -65434961 - MIR SINE MIR -95 167 80 412 266 111 54 chr2 185253604 185253954 -65433900 + L1PA15 LINE L1 5556 5925 -240 * 2285 205 54 10 chr2 185253665 185254182 -65433672 + L1ME2 LINE L1 5623 6162 -2 1072 161 57 0 chr2 185254232 185254443 -65433411 + L1MB7 LINE L1 5946 6168 -16 273 315 93 90 chr2 185254582 185254861 -65432993 + L2 LINE L2 2992 3271 -1 246 319 163 36 chr2 185254976 185255142 -65432712 - MER5A DNA MER1_type -2 187 1 427 267 122 0 chr2 185257138 185257310 -65430544 + MIR SINE MIR 70 262 0 804 132 0 31 chr2 185259729 185259858 -65427996 - MLT2D LTR ERVL -289 125 1 3990 104 2 2 chr2 185260623 185261170 -65426684 + L1PA15 LINE L1 5564 6110 -55 3295 127 2 2 chr2 185261272 185261738 -65426116 + L1PA15 LINE L1 5695 6160 -5 1925 159 38 54 chr2 185261869 185262240 -65425614 - MLT1A1 LTR MaLR 0 365 1 21 57 0 0 chr2 185262599 185262634 -65425220 + AT_rich Low_complexity Low_complexity 1 35 0 349 309 31 41 chr2 185262966 185263160 -65424694 - MIR SINE MIR -50 212 21 2258 23 23 0 chr2 185265537 185265793 -65422061 - L1PA4 LINE L1 -1 6154 5893 245 232 0 98 chr2 185266068 185266150 -65421704 - MARNA DNA Mariner -75 511 438 335 274 65 39 chr2 185266315 185266468 -65421386 + L2 LINE L2 3155 3311 -2 1241 185 46 52 chr2 185266687 185267011 -65420843 - MER33 DNA MER1_type 0 324 3 242 236 18 0 chr2 185267403 185267458 -65420396 - L2 LINE L2 -826 2488 2433 320 330 88 5 chr2 185267484 185267678 -65420176 - L2 LINE L2 -1129 2185 1976 231 321 0 0 chr2 185268139 185268223 -65419631 + L1MC/D LINE L1 5743 5826 -507 208 143 0 61 chr2 185268346 185268395 -65419459 + (CATATA)n Simple_repeat Simple_repeat 1 46 0 33410 104 10 54 chr2 185269290 185275728 -65412126 - L1PA7 LINE L1 0 6154 12 1186 140 0 0 chr2 185275745 185275909 -65411945 - AluSp SINE Alu -20 293 130 201 372 44 62 chr2 185280256 185280530 -65407324 - L2 LINE L2 -641 2673 2405 183 333 65 32 chr2 185280448 185280541 -65407313 + L3 LINE CR1 1460 1555 -22 * 1742 239 56 94 chr2 185280541 185280815 -65407039 - MER21B LTR ERV1 -109 754 471 1584 178 47 13 chr2 185280815 185281113 -65406741 - AluJb SINE Alu -4 308 1 1742 239 56 94 chr2 185281113 185281622 -65406232 - MER21B LTR ERV1 -392 471 1 375 302 94 27 chr2 185281639 185281788 -65406066 - L2 LINE L2 -928 2386 2228 1494 198 60 0 chr2 185281992 185282300 -65405554 - MER58B DNA MER1_type -17 324 1 1098 278 34 6 chr2 185282528 185282855 -65404999 + L2 LINE L2 1998 2333 -981 307 298 38 68 chr2 185282883 185283118 -65404736 + L2 LINE L2 2467 2694 -620 652 173 26 77 chr2 185283119 185283275 -65404579 - L1MC2 LINE L1 0 6344 6197 1343 219 118 35 chr2 185283275 185283641 -65404213 + MSTD LTR MaLR 1 396 0 20598 32 1 1 chr2 185283743 185286193 -65401661 - L1P LINE L1 -1345 4801 2352 706 227 8 0 chr2 185286193 185286320 -65401534 + MER2 DNA MER2_type 4 131 -214 386 257 0 0 chr2 185286320 185286394 -65401460 + Tigger3(Golem) DNA MER2_type 1 74 -2955 650 204 24 36 chr2 185287887 185288054 -65399800 - THE1C LTR MaLR 0 375 211 5230 174 16 11 chr2 185288765 185289813 -65398041 + L1 LINE L1 3025 4078 -2068 18135 64 57 4 chr2 185289820 185292254 -65395600 + L1P LINE L1 4 2567 -3579 8290 17 0 0 chr2 185292517 185293900 -65393954 + L1PA3 LINE L1 4765 6147 -8 4477 166 15 1 chr2 185293909 185294711 -65393143 + L1 LINE L1 4069 4881 -1265 26 0 0 0 chr2 185294909 185294935 -65392919 + AT_rich Low_complexity Low_complexity 1 26 0 1498 248 9 34 chr2 185295675 185296129 -65391725 - L1MC2 LINE L1 -196 6163 5726 558 309 100 16 chr2 185296283 185296457 -65391397 + L2 LINE L2 2921 3079 -234 2455 83 0 0 chr2 185296457 185296759 -65391095 - AluY SINE Alu -9 302 1 558 309 100 16 chr2 185296759 185296904 -65390950 + L2 LINE L2 3079 3267 -46 287 266 73 9 chr2 185297269 185297378 -65390476 + MARNA DNA Mariner 395 510 -76 467 94 0 0 chr2 185297986 185298050 -65389804 + MLT1G1 LTR MaLR 532 595 0 210 208 0 0 chr2 185298116 185298164 -65389690 + GA-rich Low_complexity Low_complexity 1 48 0 278 161 65 0 chr2 185299350 185299412 -65388442 - L1MA8 LINE L1 -227 6064 5999 460 256 33 74 chr2 185300433 185300648 -65387206 + HAL1 LINE L1 2 207 -2300 718 308 76 41 chr2 185300808 185301581 -65386273 + HAL1 LINE L1 533 1332 -1175 447 316 25 0 chr2 185301581 185301739 -65386115 + L2 LINE L2 2290 2451 -863 451 311 157 24 chr2 185301741 185302034 -65385820 + L2 LINE L2 2573 2904 -410 199 316 66 0 chr2 185302013 185302089 -65385765 + L2 LINE L2 3231 3311 -2 * 544 252 20 7 chr2 185302136 185302287 -65385567 + MIR SINE MIR 106 258 -4 618 220 0 0 chr2 185302465 185302606 -65385248 - MER63B DNA MER1_type 0 435 295 2244 124 0 3 chr2 185302606 185302912 -65384942 + AluSq SINE Alu 1 305 -8 603 239 0 0 chr2 185302957 185303074 -65384780 - FLAM_C SINE Alu -16 117 1 586 200 0 0 chr2 185303262 185303367 -65384487 - AluJb SINE Alu -36 276 172 206 216 0 0 chr2 185303647 185303684 -65384170 + polypyrimidine Low_complexity Low_complexity 4 40 0 279 311 125 66 chr2 185303710 185304102 -65383752 - L2 LINE L2 -41 3231 2817 4297 95 16 3 chr2 185304513 185305133 -65382721 - L1PA13 LINE L1 -2 6161 5534 677 275 65 10 chr2 185305163 185305363 -65382491 - MIR SINE MIR -21 241 31 595 252 14 33 chr2 185305579 185305789 -65382065 - AluJo SINE Alu -106 206 1 665 211 15 8 chr2 185305803 185305936 -65381918 - MER5B DNA MER1_type -44 134 1 571 241 80 21 chr2 185305941 185306128 -65381726 - MIR SINE MIR -7 255 58 2397 84 0 3 chr2 185306303 185306602 -65381252 + AluSc SINE Alu 1 298 -11 830 259 113 0 chr2 185306795 185307061 -65380793 - MER63B DNA MER1_type -137 299 4 4387 168 45 12 chr2 185307564 185308814 -65379040 + L1MB4 LINE L1 4891 6179 -1 246 62 0 0 chr2 185309715 185309747 -65378107 + (TA)n Simple_repeat Simple_repeat 2 33 0 313 248 72 76 chr2 185310724 185310974 -65376880 + MLT1L LTR MaLR 363 611 -4 1805 66 4 4 chr2 185311840 185312068 -65375786 + AluY SINE Alu 72 299 -12 267 298 47 58 chr2 185314543 185314734 -65373120 - MIR SINE MIR -14 248 60 2212 115 0 16 chr2 185315595 185315908 -65371946 - AluSq SINE Alu -5 308 1 1939 251 36 2 chr2 185315914 185316555 -65371299 - L1MEc LINE L1 -3331 2884 2222 2119 252 70 36 chr2 185316563 185317229 -65370625 - L1MEc LINE L1 -4539 1857 1142 2480 58 0 10 chr2 185317229 185317523 -65370331 - AluY SINE Alu -8 303 13 2119 252 70 36 chr2 185317523 185317896 -65369958 - L1MEc LINE L1 -5254 1142 783 916 292 10 7 chr2 185317917 185318205 -65369649 - L1MEc LINE L1 -6072 324 36 228 260 0 0 chr2 185319812 185319862 -65367992 + L2 LINE L2 3264 3313 0 303 273 139 61 chr2 185320712 185320877 -65366977 - MER5A DNA MER1_type 0 178 1 2125 190 14 5 chr2 185322658 185323084 -65364770 - MER65C LTR ERV1 -5 456 27 1562 163 31 62 chr2 185323215 185323440 -65364414 - MER2 DNA MER2_type 0 345 133 2162 156 6 0 chr2 185323440 185323786 -65364068 - MER7A DNA MER2_type 0 346 1 1562 163 31 62 chr2 185323786 185323915 -65363939 - MER2 DNA MER2_type -212 133 2 423 287 113 56 chr2 185325509 185325899 -65361955 + MLT1J LTR MaLR 100 511 0 613 197 191 0 chr2 185325952 185326104 -65361750 - MER5A DNA MER1_type 0 189 9 351 0 0 0 chr2 185326164 185326203 -65361651 + (TG)n Simple_repeat Simple_repeat 2 40 0 583 273 156 39 chr2 185326381 185326791 -65361063 + LTR33 LTR ERVL 10 467 -54 292 352 69 51 chr2 185327110 185327499 -65360355 + L2 LINE L2 2827 3222 -50 646 306 47 13 chr2 185329014 185329249 -65358605 + MLT1J LTR MaLR 1 243 -268 229 175 0 0 chr2 185329570 185329610 -65358244 - MIR SINE MIR -113 149 110 3834 95 3 32 chr2 185329804 185330373 -65357481 + MER41A LTR ERV1 1 553 -1 469 226 29 10 chr2 185331236 185331338 -65356516 - MER5A DNA MER1_type -77 112 9 198 0 0 0 chr2 185331505 185331527 -65356327 + (TTA)n Simple_repeat Simple_repeat 1 22 0 1329 240 119 3 chr2 185331713 185332100 -65355754 - LTR16A LTR ERVL -1 449 18 3056 100 11 0 chr2 185332209 185332670 -65355184 - MER41A LTR ERV1 -88 466 1 12299 99 20 12 chr2 185332670 185334673 -65353181 - MER41A-int LTR ERV1 -2 5944 3125 2455 77 0 0 chr2 185334673 185334972 -65352882 - AluY SINE Alu -12 299 1 12299 99 20 12 chr2 185334972 185335245 -65352609 - MER41A-int LTR ERV1 -2821 3125 2856 2441 158 33 78 chr2 185335232 185335765 -65352089 - MER41B-int LTR ERV1 -4057 3759 3204 * 231 36 0 0 chr2 185335765 185335793 -65352061 + (GA)n Simple_repeat Simple_repeat 1 28 0 2441 158 33 78 chr2 185335793 185335829 -65352025 - MER41B-int LTR ERV1 -4612 3204 3168 1902 95 43 89 chr2 185335829 185336154 -65351700 + AluSg SINE Alu 1 310 0 2441 158 33 78 chr2 185336154 185336283 -65351571 - MER41B-int LTR ERV1 -4648 3168 1551 * 4952 126 50 4 chr2 185336267 185337088 -65350766 - MER41B-int LTR ERV1 -5087 859 1 256 182 325 0 chr2 185337097 185337174 -65350680 - MER41B-int LTR ERV1 -5844 102 1 908 136 7 0 chr2 185337174 185337328 -65350526 - MER41B LTR ERV1 0 635 481 1358 249 142 12 chr2 185337353 185337866 -65349988 + MLT1L LTR MaLR 29 608 -7 579 198 18 0 chr2 185339876 185339987 -65347867 - MER81 DNA DNA -1 113 1 305 309 122 43 chr2 185340214 185340398 -65347456 - MIR SINE MIR -31 231 36 1969 145 7 3 chr2 185340424 185340734 -65347120 + AluJo SINE Alu 1 311 -1 217 289 157 44 chr2 185341093 185341130 -65346724 + MIR3 SINE MIR 26 57 -151 548 90 0 0 chr2 185341130 185341208 -65346646 + MADE1 DNA Mariner 1 78 -2 217 289 157 44 chr2 185341208 185341329 -65346525 + MIR3 SINE MIR 57 202 -6 414 327 74 18 chr2 185341443 185341660 -65346194 + MIR SINE MIR 2 230 -32 1260 165 0 36 chr2 185342057 185342177 -65345677 + L1MB3 LINE L1 5934 6042 -141 1543 94 0 0 chr2 185342177 185342368 -65345486 + AluY SINE Alu 1 191 -120 1260 165 0 36 chr2 185342368 185342495 -65345359 + L1MB3 LINE L1 6042 6172 -11 549 248 182 28 chr2 185342895 185343109 -65344745 + MIR SINE MIR 16 262 0 438 79 0 0 chr2 185343944 185344007 -65343847 + (TG)n Simple_repeat Simple_repeat 2 64 0 812 174 0 0 chr2 185344184 185344359 -65343495 - AluJb SINE Alu 0 312 164 2185 124 3 0 chr2 185344866 185345165 -65342689 + AluSq SINE Alu 1 300 -13 670 188 43 0 chr2 185346641 185346778 -65341076 - AluSg/x SINE Alu 0 303 162 293 284 12 12 chr2 185347222 185347303 -65340551 + L2 LINE L2 3233 3313 0 249 313 87 18 chr2 185350441 185350558 -65337296 + MIR SINE MIR 3 126 -82 245 314 34 25 chr2 185351042 185351160 -65336694 - MIR SINE MIR -72 136 18 3237 88 64 0 chr2 185352067 185352522 -65335332 + L1MA3 LINE L1 5822 6305 0 38 0 0 0 chr2 185352522 185352560 -65335294 + AT_rich Low_complexity Low_complexity 1 38 0 600 289 162 32 chr2 185352562 185352970 -65334884 + L2 LINE L2 340 800 -2514 211 171 0 0 chr2 185353042 185353077 -65334777 + L2 LINE L2 803 837 -2477 2305 265 64 51 chr2 185353096 185354051 -65333803 + L2 LINE L2 2066 3029 -284 1772 112 19 12 chr2 185354053 185354312 -65333542 - AluSx SINE Alu -51 261 1 181 71 0 71 chr2 185354408 185354450 -65333404 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 1066 169 16 0 chr2 185354542 185354725 -65333129 - L1MB1 LINE L1 0 6168 5983 1116 300 30 8 chr2 185354725 185355092 -65332762 + L2 LINE L2 1117 1491 -1823 1280 302 41 15 chr2 185355232 185355692 -65332162 + L2 LINE L2 2153 2624 -690 204 241 12 24 chr2 185355685 185355768 -65332086 - L2 LINE L2 -125 3188 3107 * 911 207 52 168 chr2 185355833 185356291 -65331563 - L2 LINE L2 -377 2937 2533 225 0 0 0 chr2 185356332 185356357 -65331497 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 276 30 0 0 chr2 185356356 185356389 -65331465 + (CA)n Simple_repeat Simple_repeat 2 34 0 261 264 11 35 chr2 185356403 185356490 -65331364 - L2 LINE L2 -787 2527 2443 183 114 0 0 chr2 185357165 185357200 -65330654 + (T)n Simple_repeat Simple_repeat 1 35 0 249 337 95 30 chr2 185358242 185358411 -65329443 + MIR3 SINE MIR 16 195 -13 1636 216 238 17 chr2 185358809 185359272 -65328582 - MLT1F1 LTR MaLR 0 567 3 21 0 0 0 chr2 185359273 185359294 -65328560 + AT_rich Low_complexity Low_complexity 1 21 0 630 269 98 10 chr2 185359497 185359690 -65328164 + MIR SINE MIR 47 256 -6 190 163 163 20 chr2 185359720 185359769 -65328085 - MIR SINE MIR -134 74 19 300 323 115 54 chr2 185360644 185360904 -65326950 + L2 LINE L2 3037 3312 -1 635 234 43 49 chr2 185360919 185361103 -65326751 - MIR SINE MIR -44 218 36 593 247 24 7 chr2 185361934 185362101 -65325753 + MLT1G LTR MaLR 430 590 0 216 125 0 0 chr2 185362343 185362375 -65325479 - L2 LINE L2 0 3313 3282 1322 279 26 23 chr2 185362379 185362769 -65325085 + MLT1G1 LTR MaLR 5 395 -200 810 236 240 0 chr2 185362806 185363048 -65324806 + MLT1G3 LTR MaLR 227 526 -4 2250 104 3 13 chr2 185363170 185363477 -65324377 - AluSc SINE Alu -5 304 1 180 270 26 113 chr2 185363663 185363778 -65324076 + L2 LINE L2 3172 3276 -37 1758 156 31 21 chr2 185364512 185364800 -65323054 + AluJb SINE Alu 1 291 -21 4950 133 27 111 chr2 185364800 185364837 -65323017 + L1MA8 LINE L1 5065 5104 -1187 1958 152 3 0 chr2 185364837 185365144 -65322710 - AluSx SINE Alu 0 308 1 4950 133 27 111 chr2 185365144 185365314 -65322540 + L1MA8 LINE L1 5104 5287 -1004 2423 112 18 68 chr2 185365314 185365697 -65322157 + THE1B LTR MaLR 1 364 0 4950 133 27 111 chr2 185365697 185366836 -65321018 + L1MA8 LINE L1 5287 6286 -5 245 321 90 15 chr2 185366969 185367103 -65320751 + L2 LINE L2 3127 3270 -2 22 0 0 0 chr2 185367747 185367769 -65320085 + AT_rich Low_complexity Low_complexity 1 22 0 955 213 37 37 chr2 185368469 185368713 -65319141 - MIR SINE MIR -11 251 8 23 0 0 0 chr2 185369176 185369199 -65318655 + AT_rich Low_complexity Low_complexity 1 23 0 2094 106 7 0 chr2 185370694 185370997 -65316857 + AluSx SINE Alu 1 305 0 615 27 0 0 chr2 185372390 185372463 -65315391 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 1585 166 46 21 chr2 185374520 185374804 -65313050 - AluJb SINE Alu -21 291 1 212 98 0 49 chr2 185375637 185375678 -65312176 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 24 0 0 0 chr2 185376475 185376499 -65311355 + AT_rich Low_complexity Low_complexity 1 24 0 364 181 14 14 chr2 185376549 185376621 -65311233 - AluJ/FLAM SINE Alu -230 72 1 2280 52 56 0 chr2 185376629 185376915 -65310939 - AluY SINE Alu -9 302 1 270 322 104 61 chr2 185377367 185377808 -65310046 - L2 LINE L2 0 3272 2813 238 339 28 0 chr2 185378009 185378118 -65309736 + CT-rich Low_complexity Low_complexity 2 113 0 273 247 99 0 chr2 185378229 185378310 -65309544 + L3b LINE CR1 1289 1377 -206 2177 92 0 7 chr2 185378333 185378703 -65309151 + AluSc SINE Alu 1 368 0 2551 137 75 10 chr2 185378931 185379333 -65308521 + MSTA LTR MaLR 1 428 0 2512 163 23 46 chr2 185379714 185380192 -65307662 + MLT1C LTR MaLR 1 467 0 1827 186 0 0 chr2 185380631 185380937 -65306917 + AluJo SINE Alu 3 308 -4 1757 135 47 17 chr2 185381244 185381540 -65306314 - AluJo SINE Alu -7 305 1 183 156 0 0 chr2 185384292 185384324 -65303530 + T-rich Low_complexity Low_complexity 1 32 0 302 277 7 58 chr2 185384345 185384500 -65303354 + CT-rich Low_complexity Low_complexity 4 150 0 823 293 24 24 chr2 185384932 185385163 -65302691 + L1ME4a LINE L1 5592 5822 -299 2547 40 0 7 chr2 185385163 185385466 -65302388 + AluY SINE Alu 1 301 -10 189 74 0 0 chr2 185385466 185385493 -65302361 + (TA)n Simple_repeat Simple_repeat 1 27 0 823 293 24 24 chr2 185385493 185385595 -65302259 + L1ME4a LINE L1 5820 5926 -195 505 233 140 71 chr2 185385600 185386296 -65301558 + LTR41 LTR ERVL 19 793 -2 430 216 58 29 chr2 185386319 185386458 -65301396 + L1ME4a LINE L1 5964 6106 -15 470 203 0 0 chr2 185386482 185386561 -65301293 + L1PA8 LINE L1 6085 6163 -9 382 85 0 0 chr2 185386850 185386897 -65300957 - U6 snRNA snRNA -60 47 1 1723 167 3 41 chr2 185386955 185387272 -65300582 - AluJb SINE Alu -5 307 3 1914 198 64 47 chr2 185387426 185387876 -65299978 + MLT1E3 LTR MaLR 3 460 -164 1356 194 176 37 chr2 185389224 185389632 -65298222 + MLT1C LTR MaLR 1 465 -2 2218 117 0 0 chr2 185390280 185390578 -65297276 + AluSx SINE Alu 1 298 -14 1825 171 7 0 chr2 185391242 185391547 -65296307 + AluJb SINE Alu 1 307 -5 1246 263 46 3 chr2 185393466 185393789 -65294065 - MER46C DNA MER2_type -1 337 1 282 309 21 11 chr2 185393873 185393967 -65293887 - MIR SINE MIR -57 151 57 2992 167 14 63 chr2 185394421 185394897 -65292957 + L1MC3 LINE L1 7164 7601 -184 1689 179 3 24 chr2 185394897 185395194 -65292660 + AluJo SINE Alu 1 291 -21 2992 167 14 63 chr2 185395194 185395364 -65292490 + L1MC3 LINE L1 7601 7778 -7 1701 135 20 61 chr2 185395483 185395813 -65292041 - AluJb SINE Alu 0 318 1 341 333 137 7 chr2 185397355 185397508 -65290346 + L2 LINE L2 3100 3272 0 581 270 72 34 chr2 185397541 185397778 -65290076 + MLT1L LTR MaLR 73 318 -297 343 269 0 0 chr2 185397793 185397871 -65289983 + L2 LINE L2 3195 3272 0 281 226 57 16 chr2 185397919 185398060 -65289794 + MLT1L LTR MaLR 339 538 -77 2241 117 0 0 chr2 185398312 185398612 -65289242 + AluSq SINE Alu 1 300 -13 2375 112 0 0 chr2 185401626 185401938 -65285916 - AluSq SINE Alu -1 312 1 29 0 0 0 chr2 185403856 185403885 -65283969 + AT_rich Low_complexity Low_complexity 1 29 0 332 308 49 28 chr2 185404197 185404444 -65283410 + L1ME4a LINE L1 5629 5880 -241 205 300 92 33 chr2 185404516 185404636 -65283218 - L2 LINE L2 -5 3267 3141 189 0 0 0 chr2 185404678 185404699 -65283155 + (TG)n Simple_repeat Simple_repeat 1 21 0 315 105 0 0 chr2 185404701 185404758 -65283096 + (GA)n Simple_repeat Simple_repeat 2 58 0 2304 98 3 10 chr2 185405069 185405376 -65282478 - AluSx SINE Alu -7 305 1 1933 141 3 3 chr2 185405853 185406150 -65281704 + AluSx SINE Alu 11 307 -5 365 258 154 71 chr2 185406300 185406664 -65281190 - MLT1K LTR MaLR -56 532 139 442 281 40 40 chr2 185407348 185407576 -65280278 + L2 LINE L2 3082 3309 -4 1872 161 0 3 chr2 185408013 185408318 -65279536 - AluSx SINE Alu 0 304 1 323 258 59 118 chr2 185408432 185408653 -65279201 - LTR16A LTR ERVL 0 450 243 2336 89 0 0 chr2 185409234 185409527 -65278327 + AluSc SINE Alu 1 293 -16 1970 147 0 7 chr2 185410247 185410540 -65277314 - AluSx SINE Alu -20 292 2 2012 122 7 0 chr2 185411131 185411410 -65276444 + AluSc SINE Alu 1 281 -28 216 0 0 0 chr2 185411424 185411448 -65276406 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 375 226 11 11 chr2 185411682 185411775 -65276079 - MER103 DNA DNA -2 164 72 2136 127 0 0 chr2 185412310 185412602 -65275252 + AluSx SINE Alu 7 298 -14 498 290 47 0 chr2 185412905 185413098 -65274756 - MIR SINE MIR -2 260 59 406 228 43 0 chr2 185413254 185413346 -65274508 - MER81 DNA DNA -18 96 1 246 155 71 71 chr2 185413762 185413846 -65274008 - MIR SINE MIR -65 143 60 2246 133 33 25 chr2 185414175 185414536 -65273318 + THE1B LTR MaLR 1 364 0 215 307 61 9 chr2 185414871 185414985 -65272869 + L2 LINE L2 3180 3299 -14 1000 235 41 0 chr2 185415119 185415315 -65272539 - MER63A DNA MER1_type -6 204 1 1632 192 10 0 chr2 185416582 185416879 -65270975 + AluJo SINE Alu 11 310 -2 289 296 88 25 chr2 185417476 185417635 -65270219 + L1ME LINE L1 5628 5796 -325 2428 82 3 0 chr2 185417728 185418034 -65269820 - AluSq SINE Alu -6 307 1 2156 99 7 3 chr2 185418039 185418341 -65269513 - AluSx SINE Alu -9 303 1 318 174 23 12 chr2 185419795 185419881 -65267973 + GA-rich Low_complexity Low_complexity 3 89 0 207 0 0 0 chr2 185419883 185419906 -65267948 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 204 361 24 36 chr2 185419925 185420091 -65267763 + MIR3 SINE MIR 39 202 -6 2180 133 3 3 chr2 185420327 185420636 -65267218 - AluSg SINE Alu -1 309 1 678 53 21 11 chr2 185420725 185420820 -65267034 + AluY SINE Alu 193 288 -23 351 0 0 0 chr2 185421186 185421225 -65266629 + (T)n Simple_repeat Simple_repeat 1 39 0 502 263 66 42 chr2 185421495 185421784 -65266070 + L1ME LINE L1 373 668 -5402 252 15 48 0 chr2 185422031 185422080 -65265774 + AluY SINE Alu 258 299 0 22 35 0 0 chr2 185422314 185422343 -65265511 + AT_rich Low_complexity Low_complexity 1 29 0 200 226 0 19 chr2 185422847 185422900 -65264954 + A-rich Low_complexity Low_complexity 2 53 0 581 234 142 9 chr2 185423333 185423551 -65264303 - MIR SINE MIR 0 262 16 2078 129 7 7 chr2 185423922 185424231 -65263623 + AluSc SINE Alu 1 309 0 1257 136 40 10 chr2 185424729 185424927 -65262927 + AluJo SINE Alu 1 204 -108 258 156 0 0 chr2 185424941 185424986 -65262868 + A-rich Low_complexity Low_complexity 1 45 0 494 244 65 24 chr2 185425395 185425563 -65262291 + MER5B DNA MER1_type 4 178 0 366 274 158 24 chr2 185425588 185425752 -65262102 + MIR SINE MIR 36 221 -41 741 132 29 52 chr2 185427999 185428135 -65259719 + FLAM_C SINE Alu 1 133 0 22 0 0 0 chr2 185428135 185428157 -65259697 + AT_rich Low_complexity Low_complexity 1 22 0 1383 149 21 76 chr2 185428350 185428679 -65259175 - L1MB8 LINE L1 0 6178 5868 203 203 188 0 chr2 185430027 185430096 -65257758 + MIR SINE MIR 165 246 -16 289 152 0 0 chr2 185431452 185431498 -65256356 + L2 LINE L2 3263 3308 -5 303 209 44 22 chr2 185432295 185432359 -65255495 - MIR SINE MIR -64 144 76 2326 96 0 0 chr2 185432359 185432652 -65255202 + AluSq SINE Alu 1 293 -20 303 209 44 22 chr2 185432652 185432678 -65255176 - MIR SINE MIR -132 76 52 291 237 0 0 chr2 185432824 185432883 -65254971 + MER103 DNA DNA 6 64 -102 447 194 0 0 chr2 185434097 185434190 -65253664 + GA-rich Low_complexity Low_complexity 2 94 0 199 130 22 22 chr2 185435472 185435518 -65252336 + GA-rich Low_complexity Low_complexity 2 47 0 21 0 0 0 chr2 185437164 185437185 -65250669 + AT_rich Low_complexity Low_complexity 1 21 0 2353 98 0 0 chr2 185437456 185437792 -65250062 - AluSx SINE Alu 0 312 1 229 281 16 0 chr2 185438414 185438478 -65249376 + MIR3 SINE MIR 116 180 -28 2208 115 23 0 chr2 185439526 185439831 -65248023 + AluSq SINE Alu 1 312 -1 3046 108 21 0 chr2 185440311 185440736 -65247118 + MER57B LTR ERV1 1 434 0 256 252 84 8 chr2 185442416 185442547 -65245307 + L1MC/D LINE L1 5710 5850 -1958 21 0 0 0 chr2 185443215 185443236 -65244618 + AT_rich Low_complexity Low_complexity 1 21 0 234 311 0 0 chr2 185443702 185443763 -65244091 + (CATG)n Simple_repeat Simple_repeat 3 63 0 278 254 107 16 chr2 185443941 185444063 -65243791 + L1ME3 LINE L1 5715 5847 -274 208 254 25 25 chr2 185444068 185444186 -65243668 + (TTATA)n Simple_repeat Simple_repeat 1 118 0 303 49 0 0 chr2 185444318 185444359 -65243495 + (TA)n Simple_repeat Simple_repeat 2 42 0 2342 91 103 3 chr2 185444359 185444699 -65243155 + MER51B LTR ERV1 4 377 0 357 228 41 151 chr2 185444712 185444746 -65243108 + L1ME3 LINE L1 5964 6000 -162 1846 164 7 7 chr2 185444746 185445085 -65242769 - AluJb SINE Alu 0 312 1 357 228 41 151 chr2 185445085 185445269 -65242585 + L1ME3 LINE L1 6000 6156 -6 253 213 33 0 chr2 185448099 185448160 -65239694 + L2 LINE L2 3251 3313 0 180 0 0 0 chr2 185449286 185449306 -65238548 + (A)n Simple_repeat Simple_repeat 1 20 0 2235 103 3 0 chr2 185450571 185450888 -65236966 - AluSx SINE Alu 0 318 1 677 271 6 11 chr2 185451072 185451249 -65236605 - MER5B DNA MER1_type -2 176 1 1833 176 69 0 chr2 185451347 185451711 -65236143 + MLT1B LTR MaLR 1 389 -1 1521 252 133 20 chr2 185451809 185452383 -65235471 - MLT1G LTR MaLR -7 583 1 2230 119 0 3 chr2 185452391 185452693 -65235161 - AluSx SINE Alu -11 301 1 357 236 155 0 chr2 185452698 185452846 -65235008 + MIR SINE MIR 92 262 0 528 226 98 83 chr2 185453175 185453255 -65234599 + L1ME4a LINE L1 5851 5928 -193 1799 146 20 36 chr2 185453255 185453557 -65234297 - AluJo SINE Alu -15 297 1 528 226 98 83 chr2 185453557 185453742 -65234112 + L1ME4a LINE L1 5928 6120 -1 21 0 0 0 chr2 185453776 185453797 -65234057 + AT_rich Low_complexity Low_complexity 1 21 0 4323 199 37 25 chr2 185453798 185454857 -65232997 - L1MD2 LINE L1 -148 6211 5136 2014 127 10 17 chr2 185454889 185455189 -65232665 + AluSx SINE Alu 3 300 -12 306 0 0 0 chr2 185455237 185455271 -65232583 + (A)n Simple_repeat Simple_repeat 1 34 0 1878 153 7 3 chr2 185455870 185456165 -65231689 + AluSx SINE Alu 3 298 -14 283 250 31 102 chr2 185456372 185456589 -65231265 + HAL1 LINE L1 2270 2468 -39 2751 131 14 19 chr2 185456589 185457016 -65230838 + MSTC LTR MaLR 4 428 0 283 250 31 102 chr2 185457016 185457054 -65230800 + HAL1 LINE L1 2468 2507 0 2100 133 3 0 chr2 185457217 185457511 -65230343 - AluSx SINE Alu -17 295 1 230 233 17 0 chr2 185457547 185457607 -65230247 + L1ME4a LINE L1 5983 6043 -78 1716 141 19 4 chr2 185457647 185457903 -65229951 - AluJo SINE Alu -19 293 34 38 0 0 0 chr2 185457939 185457977 -65229877 + AT_rich Low_complexity Low_complexity 1 38 0 2447 70 0 23 chr2 185458073 185458375 -65229479 + AluY SINE Alu 1 295 -16 399 164 0 0 chr2 185458571 185458644 -65229210 + L1MB5 LINE L1 4307 4379 -1767 2086 122 0 16 chr2 185458646 185458949 -65228905 + AluSx SINE Alu 1 298 -14 641 205 0 16 chr2 185458955 185459082 -65228772 + FLAM_C SINE Alu 2 126 -17 4373 156 42 42 chr2 185459096 185459491 -65228363 + L1MB5 LINE L1 4352 4746 -1428 2292 92 3 0 chr2 185459491 185459784 -65228070 + AluSc SINE Alu 1 294 -15 4373 156 42 42 chr2 185459784 185460224 -65227630 + L1MB5 LINE L1 4746 5185 -989 2827 172 31 39 chr2 185460224 185460836 -65227018 + L1MB7 LINE L1 5569 6175 -9 4373 156 42 42 chr2 185460836 185460976 -65226878 + L1MB5 LINE L1 5185 5324 -850 926 187 6 12 chr2 185460976 185461142 -65226712 + FRAM SINE Alu 2 166 0 4373 156 42 42 chr2 185461142 185461669 -65226185 + L1MB5 LINE L1 5324 5858 -316 2121 127 3 0 chr2 185461679 185461971 -65225883 - AluSq SINE Alu -20 293 1 735 216 0 37 chr2 185462008 185462170 -65225684 + FRAM SINE Alu 5 160 -16 1274 169 61 40 chr2 185462170 185462448 -65225406 + L1MB5 LINE L1 5885 6168 -6 198 0 0 0 chr2 185462930 185462952 -65224902 + (A)n Simple_repeat Simple_repeat 1 22 0 2241 83 7 10 chr2 185462954 185463244 -65224610 + AluSx SINE Alu 1 289 -23 2160 102 6 43 chr2 185463483 185463805 -65224049 - AluSx SINE Alu -2 310 1 2173 117 7 0 chr2 185463959 185464257 -65223597 - AluSx SINE Alu -12 300 1 305 173 37 62 chr2 185464286 185464367 -65223487 + L1MC5 LINE L1 5853 5931 -1877 1066 88 7 7 chr2 185464388 185464525 -65223329 - AluJo SINE Alu -175 137 1 375 184 24 54 chr2 185464541 185464758 -65223096 + (TTATA)n Simple_repeat Simple_repeat 1 210 0 180 234 0 0 chr2 185464761 185464808 -65223046 + (TA)n Simple_repeat Simple_repeat 2 48 0 406 257 0 18 chr2 185464844 185464953 -65222901 + L1MC5 LINE L1 6731 6837 -1124 406 179 0 0 chr2 185466784 185466851 -65221003 - MER58 DNA MER1_type -7 2413 2347 373 257 19 19 chr2 185466855 185466960 -65220894 - MER58 DNA MER1_type -110 105 1 764 112 78 0 chr2 185466986 185467102 -65220752 + FLAM_C SINE Alu 9 133 -10 417 253 71 40 chr2 185468859 185469057 -65218797 - L1ME3 LINE L1 -2 6160 5957 2324 77 0 30 chr2 185469562 185469862 -65217992 + AluSc SINE Alu 1 291 -18 948 171 0 0 chr2 185470285 185470431 -65217423 + AluJo SINE Alu 3 148 -164 237 271 35 35 chr2 185470489 185470574 -65217280 + L2 LINE L2 3184 3268 -4 2068 126 3 13 chr2 185473530 185473839 -65214015 + AluJb SINE Alu 1 306 -6 1389 133 12 21 chr2 185473926 185474167 -65213687 - L1MB3 LINE L1 -18 6165 5927 3041 166 69 30 chr2 185474252 185474291 -65213563 + L1MB8 LINE L1 5403 5439 -739 2266 109 0 28 chr2 185474291 185474612 -65213242 + AluSx SINE Alu 1 312 0 3041 166 69 30 chr2 185474612 185474656 -65213198 + L1MB8 LINE L1 5439 5480 -698 2149 142 3 3 chr2 185474656 185474967 -65212887 + AluSx SINE Alu 1 311 -1 3041 166 69 30 chr2 185474967 185475537 -65212317 + L1MB8 LINE L1 5480 6082 -96 1728 142 15 7 chr2 185475641 185475915 -65211939 + AluJo SINE Alu 11 286 -26 212 280 0 0 chr2 185476537 185476587 -65211267 - L2 LINE L2 -13 3259 3210 1826 167 0 13 chr2 185477855 185478160 -65209694 - AluJo SINE Alu -9 303 3 2683 40 0 0 chr2 185478188 185478489 -65209365 - AluY SINE Alu -10 301 1 1705 131 25 0 chr2 185479612 185479856 -65207998 + AluJb SINE Alu 11 260 -52 217 209 220 33 chr2 185479863 185479954 -65207900 - MIR3 SINE MIR -16 192 85 445 244 161 44 chr2 185480243 185480448 -65207406 - MIR SINE MIR 0 262 34 203 125 0 0 chr2 185482777 185482809 -65205045 + L2 LINE L2 3240 3271 -1 421 223 113 15 chr2 185483008 185483040 -65204814 + L1ME3 LINE L1 5404 5431 -763 4046 83 26 2 chr2 185483040 185483581 -65204273 - MER41A LTR ERV1 0 554 1 421 223 113 15 chr2 185483581 185483710 -65204144 + L1ME3 LINE L1 5431 5583 -611 9379 133 57 18 chr2 185483716 185485125 -65202729 + Tigger1 DNA MER2_type 2 1477 -941 2165 97 0 76 chr2 185485125 185485454 -65202400 + AluY SINE Alu 1 304 -7 9379 133 57 18 chr2 185485454 185485576 -65202278 + Tigger1 DNA MER2_type 1477 1593 -825 552 254 45 56 chr2 185485578 185485865 -65201989 - L2 LINE L2 -107 3206 2923 587 248 169 30 chr2 185485896 185486198 -65201656 - L2 LINE L2 -479 2835 2492 351 291 90 17 chr2 185486203 185486437 -65201417 + L1ME3 LINE L1 5698 5948 -214 942 188 0 29 chr2 185486567 185486737 -65201117 - FRAM SINE Alu -1 165 1 2327 153 31 0 chr2 185486749 185487140 -65200714 + MER57A LTR ERV1 1 403 0 186 43 0 0 chr2 185487250 185487273 -65200581 + (T)n Simple_repeat Simple_repeat 1 23 0 24 0 0 0 chr2 185487283 185487307 -65200547 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 185487643 185487678 -65200176 + AT_rich Low_complexity Low_complexity 1 35 0 960 75 7 41 chr2 185487678 185487824 -65200030 - L1PA10 LINE L1 -5 6163 6023 1823 160 10 16 chr2 185487847 185488159 -65199695 - AluJb SINE Alu -2 310 1 2008 118 0 24 chr2 185489566 185489853 -65198001 + AluSx SINE Alu 1 280 -32 202 0 91 0 chr2 185489853 185489886 -65197968 + A-rich Low_complexity Low_complexity 1 36 0 753 145 0 0 chr2 185489898 185490015 -65197839 + L1MB4 LINE L1 5843 5959 -221 439 156 0 52 chr2 185490015 185490092 -65197762 + AluSx SINE Alu 2 74 -238 1105 240 20 9 chr2 185490094 185490430 -65197424 - LTR10B LTR ERV1 -21 526 157 225 177 129 32 chr2 185490504 185490566 -65197288 - LTR10B LTR ERV1 -437 68 1 1638 130 8 8 chr2 185490566 185490804 -65197050 + AluSx SINE Alu 71 308 -4 959 145 50 30 chr2 185490804 185490987 -65196867 + L1MB4 LINE L1 5948 6137 -43 2248 110 10 0 chr2 185490987 185491277 -65196577 - AluSg SINE Alu -17 293 1 959 145 50 30 chr2 185491277 185491293 -65196561 + L1MB4 LINE L1 6137 6151 -29 22 0 0 0 chr2 185491319 185491341 -65196513 + AT_rich Low_complexity Low_complexity 1 22 0 2143 127 3 13 chr2 185491400 185491715 -65196139 - AluSx SINE Alu 0 312 1 2538 80 0 3 chr2 185491799 185492112 -65195742 - AluSq SINE Alu -1 312 1 1048 149 0 12 chr2 185492112 185492269 -65195585 - AluSg/x SINE Alu -10 302 146 2263 115 0 0 chr2 185492520 185492816 -65195038 - AluY SINE Alu -15 296 1 324 0 0 0 chr2 185493101 185493137 -65194717 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 875 79 0 9 chr2 185493140 185493254 -65194600 - AluSg/x SINE Alu -33 279 167 1957 107 0 4 chr2 185493254 185493507 -65194347 - AluSq SINE Alu -61 252 1 528 326 72 0 chr2 185493881 185494074 -65193780 - L2 LINE L2 -527 2787 2581 2231 115 0 3 chr2 185494592 185494904 -65192950 - AluY SINE Alu 0 311 1 2353 89 0 0 chr2 185494963 185495255 -65192599 - AluSx SINE Alu -16 296 5 40 37 0 0 chr2 185495268 185495322 -65192532 + AT_rich Low_complexity Low_complexity 1 54 0 2130 146 0 13 chr2 185495532 185495848 -65192006 - AluSx SINE Alu 0 312 1 324 238 197 47 chr2 185495974 185496167 -65191687 - MIR SINE MIR 0 262 41 2200 48 41 31 chr2 185496557 185496850 -65191004 + AluY SINE Alu 1 296 -15 1402 221 146 34 chr2 185497089 185497533 -65190321 - MLT1D LTR MaLR -6 499 6 419 241 97 128 chr2 185498647 185498937 -65188917 - LTR37B LTR ERV1 -181 287 7 304 206 0 29 chr2 185499388 185499456 -65188398 + LTR67 LTR ERVL 476 541 -16 303 216 68 14 chr2 185499396 185499470 -65188384 + MLT1K LTR MaLR 511 588 0 * 3807 205 99 83 chr2 185499687 185500675 -65187179 + L1MD1 LINE L1 15 985 -5555 1250 214 89 50 chr2 185500675 185501035 -65186819 - MLT1A2 LTR MaLR 0 374 1 3807 205 99 83 chr2 185501035 185501143 -65186711 + L1MD1 LINE L1 985 1090 -5450 849 143 0 0 chr2 185501143 185501269 -65186585 + FLAM_A SINE Alu 1 126 -7 1615 205 13 3 chr2 185501274 185501577 -65186277 + AluJo SINE Alu 1 306 -6 3807 205 99 83 chr2 185501577 185501908 -65185946 + L1MD1 LINE L1 1093 1417 -5123 1702 172 35 0 chr2 185501908 185502193 -65185661 + AluJo SINE Alu 1 295 -17 3807 205 99 83 chr2 185502193 185502230 -65185624 + L1MD1 LINE L1 1417 1452 -5088 2866 16 0 3 chr2 185502230 185502543 -65185311 + AluYb8 SINE Alu 1 312 -6 3807 205 99 83 chr2 185502543 185502618 -65185236 + L1MD1 LINE L1 1452 1524 -5016 761 176 0 0 chr2 185502618 185502743 -65185111 + FLAM_C SINE Alu 11 135 -8 3807 205 99 83 chr2 185502743 185502923 -65184931 + L1MD1 LINE L1 1524 1700 -4840 2257 128 47 36 chr2 185502923 185503283 -65184571 + THE1B LTR MaLR 1 364 0 3807 205 99 83 chr2 185503283 185503912 -65183942 + L1MD1 LINE L1 1700 2512 -4028 23 0 0 0 chr2 185503966 185503989 -65183865 + AT_rich Low_complexity Low_complexity 1 23 0 1937 134 7 14 chr2 185503989 185504280 -65183574 - AluJo SINE Alu -23 289 1 4227 261 45 18 chr2 185504284 185504586 -65183268 + L1MD1 LINE L1 2514 2806 -3734 1804 179 0 0 chr2 185504586 185504876 -65182978 - AluJb SINE Alu -21 291 2 4227 261 45 18 chr2 185504876 185506122 -65181732 + L1MD1 LINE L1 2806 4104 -2436 1591 205 22 40 chr2 185506125 185506525 -65181329 + L1MD1 LINE L1 4369 4761 -1779 834 173 81 23 chr2 185506526 185506699 -65181155 + AluJo SINE Alu 121 303 -9 584 264 65 13 chr2 185506700 185506931 -65180923 + L1MD1 LINE L1 4769 5011 -1529 1140 183 24 12 chr2 185506959 185507211 -65180643 + AluSx SINE Alu 5 259 -53 2204 13 0 0 chr2 185507332 185507570 -65180284 - AluY SINE Alu -53 258 21 1458 231 34 21 chr2 185508421 185508802 -65179052 - L1MB5 LINE L1 -106 6068 5683 2229 281 32 54 chr2 185508927 185509758 -65178096 - L1M3de LINE L1 -5671 982 8 28 29 0 0 chr2 185509974 185510009 -65177845 + AT_rich Low_complexity Low_complexity 1 35 0 1163 15 0 0 chr2 185510394 185510529 -65177325 - AluYb8 SINE Alu -46 272 138 4246 284 67 34 chr2 185510532 185511914 -65175940 + MLT-int LTR MaLR 302 1729 -6 293 310 0 11 chr2 185511960 185512047 -65175807 + AluJo SINE Alu 87 172 -130 1300 156 9 9 chr2 185512147 185512372 -65175482 + AluSg/x SINE Alu 84 308 -4 2268 234 12 27 chr2 185512388 185512987 -65174867 + L1MD1 LINE L1 5118 5707 -833 1234 162 0 0 chr2 185512988 185513173 -65174681 + AluJb SINE Alu 3 187 -125 1245 174 97 12 chr2 185513174 185513432 -65174422 - LTR4 LTR ERV1 0 596 317 778 171 0 0 chr2 185513648 185513771 -65174083 + AluJb SINE Alu 185 307 -5 1780 171 9 6 chr2 185513771 185514087 -65173767 + L1MD1 LINE L1 5704 6020 -616 3361 145 38 29 chr2 185514246 185514525 -65173329 + L1MD1 LINE L1 6046 6321 -315 1748 186 10 0 chr2 185514525 185514826 -65173028 - AluJo SINE Alu -8 304 1 3361 145 38 29 chr2 185514826 185515131 -65172723 + L1MD1 LINE L1 6321 6635 -1 614 246 170 6 chr2 185515311 185515482 -65172372 + L1ME LINE L1 75 273 -5797 2319 77 13 3 chr2 185515482 185515781 -65172073 + AluSq SINE Alu 1 302 -11 1205 128 0 0 chr2 185515781 185515953 -65171901 + AluSq SINE Alu 135 306 -7 486 231 15 23 chr2 185515956 185516086 -65171768 + L1ME LINE L1 266 394 -5676 849 262 100 35 chr2 185516628 185517109 -65170745 + L1ME LINE L1 305 816 -5254 376 143 32 167 chr2 185517109 185517235 -65170619 + AluJ/FLAM SINE Alu 1 66 -236 641 275 40 61 chr2 185517265 185517551 -65170303 + L1ME LINE L1 837 1109 -4971 2507 70 0 6 chr2 185517551 185517864 -65169990 + AluY SINE Alu 1 311 0 641 275 40 61 chr2 185517864 185518104 -65169750 + L1ME LINE L1 1109 1352 -4728 320 207 60 35 chr2 185519065 185519181 -65168673 + MER113 DNA MER1_type? 1 119 -402 283 237 17 0 chr2 185519346 185519405 -65168449 + MER113 DNA MER1_type? 332 391 -130 2221 92 0 0 chr2 185520020 185520325 -65167529 - AluY SINE Alu 0 305 1 348 83 0 0 chr2 185520356 185520404 -65167450 + (GA)n Simple_repeat Simple_repeat 1 48 0 774 298 79 43 chr2 185520629 185521022 -65166832 + L1ME LINE L1 46 452 -5618 1347 237 40 13 chr2 185521150 185521607 -65166247 + L1ME LINE L1 521 897 -5173 4920 121 48 38 chr2 185521607 185521770 -65166084 + MER4E LTR ERV1 1 161 -618 2178 103 3 7 chr2 185521770 185522060 -65165794 + AluSx SINE Alu 1 289 -23 4920 121 48 38 chr2 185522060 185522667 -65165187 + MER4E LTR ERV1 161 779 0 1347 237 40 13 chr2 185522667 185522865 -65164989 + L1ME LINE L1 897 1088 -4982 424 164 14 27 chr2 185522865 185522938 -65164916 - Tigger7 DNA MER2_type -1 2490 2419 1077 189 234 25 chr2 185522938 185523292 -65164562 + MSTC LTR MaLR 1 428 0 417 167 12 0 chr2 185523292 185523372 -65164482 - Tigger7 DNA MER2_type -68 2419 2339 1781 225 46 0 chr2 185523367 185523696 -65164158 - Tigger7 DNA MER2_type -2143 344 1 2143 288 40 49 chr2 185523698 185523848 -65164006 + L1ME LINE L1 1169 1319 -4761 2474 96 0 0 chr2 185523848 185524160 -65163694 - AluSx SINE Alu 0 312 1 2143 288 40 49 chr2 185524160 185524535 -65163319 + L1ME LINE L1 1319 1696 -4384 1858 177 0 0 chr2 185524535 185524840 -65163014 - AluJo SINE Alu -3 309 5 2143 288 40 49 chr2 185524840 185525341 -65162513 + L1ME LINE L1 1696 2144 -3936 2204 116 0 3 chr2 185525341 185525633 -65162221 + AluSx SINE Alu 1 291 -21 2143 288 40 49 chr2 185525633 185525870 -65161984 + L1ME LINE L1 2144 2382 -3698 1248 181 5 0 chr2 185525870 185526080 -65161774 + AluJo SINE Alu 93 303 -9 1124 191 53 61 chr2 185526081 185526442 -65161412 + L1ME LINE L1 2532 2889 -3191 2045 103 72 0 chr2 185526449 185526739 -65161115 + AluSx SINE Alu 2 312 0 338 242 0 30 chr2 185526753 185526852 -65161002 + L1ME2 LINE L1 5934 6029 -135 2371 67 0 23 chr2 185526964 185527263 -65160591 - AluSq SINE Alu -21 292 1 718 309 81 49 chr2 185527278 185527492 -65160362 + L2 LINE L2 2242 2469 -845 2360 80 17 0 chr2 185527492 185527792 -65160062 - AluY SINE Alu -6 305 1 718 309 81 49 chr2 185527792 185527862 -65159992 + L2 LINE L2 2469 2535 -779 693 193 0 0 chr2 185527862 185527976 -65159878 + MER44D DNA MER2_type 1 114 -591 2201 198 25 30 chr2 185528364 185528803 -65159051 + MER44D DNA MER2_type 111 602 -3 197 341 85 0 chr2 185528814 185528896 -65158958 + L2 LINE L2 2543 2631 -683 218 304 238 8 chr2 185528966 185529178 -65158676 + L2 LINE L2 2785 3040 -232 2151 171 13 23 chr2 185529232 185529619 -65158235 + MSTD LTR MaLR 1 383 -13 823 154 0 8 chr2 185529623 185529746 -65158108 + FLAM_C SINE Alu 2 123 -10 269 262 0 16 chr2 185529903 185529964 -65157890 + L2 LINE L2 3185 3244 -69 243 0 0 0 chr2 185530120 185530147 -65157707 + (A)n Simple_repeat Simple_repeat 1 27 0 329 234 0 0 chr2 185530657 185530721 -65157133 + MER34C LTR ERV1 37 100 -485 4692 101 12 81 chr2 185530745 185531320 -65156534 + LTR8 LTR ERV1 1 515 -176 2069 123 7 26 chr2 185531320 185531628 -65156226 + AluSx SINE Alu 1 302 -10 4692 101 12 81 chr2 185531628 185531794 -65156060 + LTR8 LTR ERV1 515 691 0 1972 179 70 32 chr2 185531811 185532253 -65155601 - LTR2B LTR ERV1 0 490 32 3496 146 137 48 chr2 185532272 185533017 -65154837 - LTR1B LTR ERV1 -15 811 1 284 117 43 0 chr2 185533122 185533180 -65154674 + MER41-int LTR ERV1 4348 4387 -1559 440 256 31 16 chr2 185533198 185533322 -65154532 + MER34B LTR ERV1 215 340 -225 1021 131 7 0 chr2 185533322 185533467 -65154387 - LTR8 LTR ERV1 0 691 546 345 175 16 0 chr2 185533464 185533527 -65154327 - LTR1B LTR ERV1 -23 803 740 * 820 166 6 25 chr2 185533690 185533713 -65154141 - L1MA6 LINE L1 0 6300 6278 1458 112 10 0 chr2 185533713 185533918 -65153936 + AluSg/x SINE Alu 84 290 -20 820 166 6 25 chr2 185533918 185534057 -65153797 - L1MA6 LINE L1 -22 6278 6141 207 375 27 9 chr2 185535052 185535164 -65152690 + L2 LINE L2 1143 1256 -2058 1635 172 151 16 chr2 185535199 185535636 -65152218 - LTR54B LTR ERV1 -2 496 1 476 216 135 20 chr2 185535836 185535984 -65151870 + MER5A DNA MER1_type 18 182 -7 613 133 0 20 chr2 185536099 185536197 -65151657 + MER4A LTR ERV1 3 98 -566 1953 116 3 46 chr2 185536197 185536453 -65151401 + MER4A LTR ERV1 261 557 -107 3001 57 117 5 chr2 185536453 185536856 -65150998 + LTR7 LTR ERV1 1 448 -2 1953 116 3 46 chr2 185536856 185536960 -65150894 + MER4A LTR ERV1 557 664 0 347 223 0 40 chr2 185536960 185537078 -65150776 + L1M4 LINE L1 5660 5770 -370 886 141 13 34 chr2 185537087 185537236 -65150618 + FRAM SINE Alu 13 158 -18 2894 104 35 43 chr2 185537277 185537536 -65150318 + MER4E LTR ERV1 1 261 -505 2505 66 0 0 chr2 185537536 185537837 -65150017 - AluY SINE Alu -10 301 1 2498 86 0 0 chr2 185537837 185538140 -65149714 - AluSx SINE Alu -9 303 1 2894 104 35 43 chr2 185538140 185538480 -65149374 + MER4E LTR ERV1 259 766 0 2237 99 7 0 chr2 185538575 185538859 -65148995 + AluSc SINE Alu 1 286 -23 730 213 0 7 chr2 185538959 185539095 -65148759 - AluJo SINE Alu -176 136 2 385 268 152 30 chr2 185539107 185539154 -65148700 + HAL1 LINE L1 95 135 -2372 5632 81 121 0 chr2 185539154 185539891 -65147963 + LTR12 LTR ERV1 1 826 0 385 268 152 30 chr2 185539891 185540074 -65147780 + HAL1 LINE L1 135 353 -2154 868 183 86 20 chr2 185540079 185540276 -65147578 - AluJb SINE Alu -18 294 85 4200 106 23 4 chr2 185540276 185540834 -65147020 + MER61E LTR ERV1 1 569 0 7230 201 50 22 chr2 185540860 185542474 -65145380 + MER61E-int LTR ERV1 2 1660 -5336 332 250 52 10 chr2 185543431 185543527 -65144327 + MER61E-int LTR ERV1 1421 1520 -5571 * 3424 204 12 13 chr2 185543517 185544200 -65143654 + MER61E-int LTR ERV1 2133 2792 -4792 * 12388 172 72 66 chr2 185544196 185544864 -65142990 + MER61E-int LTR ERV1 609 1272 -5724 2127 123 0 0 chr2 185544864 185545181 -65142673 - AluSx SINE Alu 0 317 1 12388 172 72 66 chr2 185545181 185546107 -65141747 + MER61E-int LTR ERV1 1272 2192 -4804 2534 71 3 0 chr2 185546107 185546416 -65141438 - AluY SINE Alu -1 310 1 2120 114 0 10 chr2 185546416 185546713 -65141141 - AluSc SINE Alu -15 294 1 12388 172 72 66 chr2 185546713 185546743 -65141111 + MER61E-int LTR ERV1 2192 2220 -4776 2288 104 0 0 chr2 185546743 185547040 -65140814 + AluY SINE Alu 1 297 -14 12388 172 72 66 chr2 185547040 185549255 -65138599 + MER61E-int LTR ERV1 2220 6994 -2 4097 121 20 0 chr2 185549265 185549819 -65138035 + MER61E LTR ERV1 1 565 -4 512 258 0 0 chr2 185549819 185549912 -65137942 - AluS SINE Alu -219 94 2 2258 96 3 0 chr2 185549924 185550227 -65137627 - AluY SINE Alu -7 304 1 352 280 96 0 chr2 185550238 185550363 -65137491 + HAL1 LINE L1 359 495 -2012 319 315 48 24 chr2 185550371 185550536 -65137318 + HAL1 LINE L1 530 698 -1809 394 249 124 94 chr2 185550568 185550801 -65137053 - MER112 DNA MER1_type -20 240 1 540 242 128 68 chr2 185550818 185550997 -65136857 + HAL1 LINE L1 765 932 -1575 2250 95 3 16 chr2 185550997 185551302 -65136552 + AluSq SINE Alu 1 301 -12 835 148 0 37 chr2 185551311 185551446 -65136408 + AluJo/FLAM SINE Alu 2 131 -171 2198 101 30 0 chr2 185551447 185551743 -65136111 + AluSc SINE Alu 1 305 -4 540 242 128 68 chr2 185551743 185551902 -65135952 + HAL1 LINE L1 938 1136 -1371 352 244 35 0 chr2 185551989 185552075 -65135779 - MIR SINE MIR -137 125 37 1237 170 121 18 chr2 185552289 185552440 -65135414 - MLT1A1 LTR MaLR -45 320 186 2171 105 3 3 chr2 185552440 185552735 -65135119 - AluSx SINE Alu 0 312 18 1237 170 121 18 chr2 185552735 185552865 -65134989 - MLT1A1 LTR MaLR -179 186 10 1779 169 7 0 chr2 185553414 185553698 -65134156 + AluJo SINE Alu 15 300 -12 2827 13 0 0 chr2 185553717 185554024 -65133830 + AluYa5 SINE Alu 1 307 -4 232 233 67 0 chr2 185555044 185555104 -65132750 - MIR SINE MIR -95 167 104 213 94 0 0 chr2 185555187 185555219 -65132635 + (A)n Simple_repeat Simple_repeat 1 32 0 1050 109 11 98 chr2 185555489 185555673 -65132181 - AluSp SINE Alu -13 300 133 965 150 0 0 chr2 185555764 185555904 -65131950 - FLAM_C SINE Alu -3 140 1 289 316 61 0 chr2 185556007 185556121 -65131733 - MIR SINE MIR -18 244 124 844 186 0 0 chr2 185556471 185556611 -65131243 - FLAM_C SINE Alu -3 140 1 294 262 87 8 chr2 185556640 185556766 -65131088 - L1ME4a LINE L1 -18 6103 5968 668 95 0 0 chr2 185557084 185557168 -65130686 - AluY SINE Alu -16 295 212 1340 185 18 0 chr2 185557613 185557835 -65130019 + AluJb SINE Alu 6 231 -81 275 60 220 0 chr2 185557835 185557885 -65129969 + AluJb SINE Alu 175 235 -67 5359 128 65 51 chr2 185557889 185559296 -65128558 + pTR5 LTR ERV1 744 2295 -143 406 189 0 0 chr2 185559311 185559385 -65128469 + AluJb SINE Alu 238 311 -1 1981 148 0 0 chr2 185559731 185560034 -65127820 + AluSx SINE Alu 1 303 -9 1071 173 16 0 chr2 185562290 185562481 -65125373 - AluSg/x SINE Alu -4 308 115 1046 168 0 0 chr2 185562662 185562863 -65124991 + AluSg/x SINE Alu 132 332 0 2017 145 0 3 chr2 185562869 185563166 -65124688 + AluJb SINE Alu 1 296 -16 733 178 70 25 chr2 185563948 185564105 -65123749 + MIR SINE MIR 89 252 -10 1624 170 32 14 chr2 185564231 185564514 -65123340 + AluJb SINE Alu 1 288 -24 1227 167 43 119 chr2 185564612 185564922 -65122932 - MLT1A1 LTR MaLR 0 365 90 1902 108 66 77 chr2 185564922 185565301 -65122553 + THE1C LTR MaLR 1 375 0 1227 167 43 119 chr2 185565301 185565385 -65122469 - MLT1A1 LTR MaLR -275 90 1 438 257 88 47 chr2 185566233 185566404 -65121450 + MIR3 SINE MIR 15 192 -16 2369 201 41 44 chr2 185566524 185567066 -65120788 + MLT1F LTR MaLR 1 540 -2 2156 112 3 0 chr2 185567139 185567451 -65120403 - AluSq SINE Alu 0 313 1 182 291 243 19 chr2 185567467 185567570 -65120284 - L2 LINE L2 0 3313 3188 454 338 42 82 chr2 185568810 185569189 -65118665 - L2 LINE L2 0 3272 2909 1689 175 14 0 chr2 185570662 185570947 -65116907 - AluJo SINE Alu -23 289 1 21 36 0 0 chr2 185571159 185571187 -65116667 + AT_rich Low_complexity Low_complexity 1 28 0 225 0 0 0 chr2 185572513 185572538 -65115316 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1603 143 28 63 chr2 185572538 185572824 -65115030 - AluJb SINE Alu -32 280 5 355 197 14 14 chr2 185573678 185573749 -65114105 - MER96B DNA MER1_type? 0 417 347 1139 126 45 0 chr2 185573798 185573996 -65113858 - MER96B DNA MER1_type? -63 354 148 628 280 60 0 chr2 185575221 185575389 -65112465 - MIR SINE MIR -11 251 74 974 161 51 84 chr2 185576060 185576333 -65111521 - L1MB2 LINE L1 -4 6167 5904 605 270 138 52 chr2 185576370 185576833 -65111021 + MLT1L LTR MaLR 44 546 -69 838 214 21 11 chr2 185576847 185577034 -65110820 - MER5A DNA MER1_type 0 189 1 231 224 0 52 chr2 185577037 185577095 -65110759 + MLT1L LTR MaLR 557 611 -4 2231 115 7 0 chr2 185578465 185578769 -65109085 - AluSq SINE Alu -7 306 1 304 258 66 103 chr2 185578887 185579053 -65108801 + MIR SINE MIR 1 150 -112 2043 141 0 3 chr2 185579053 185579350 -65108504 - AluJb SINE Alu -14 298 3 304 258 66 103 chr2 185579350 185579450 -65108404 + MIR SINE MIR 150 252 -10 198 71 0 0 chr2 185579453 185579481 -65108373 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 223 341 0 12 chr2 185579639 185579721 -65108133 + L2 LINE L2 3232 3312 -1 209 277 0 15 chr2 185580206 185580271 -65107583 - L3 LINE CR1 -297 1280 1217 2026 127 0 3 chr2 185580711 185581002 -65106852 - AluSx SINE Alu -22 290 1 23 0 0 0 chr2 185582021 185582044 -65105810 + AT_rich Low_complexity Low_complexity 1 23 0 243 234 62 0 chr2 185582616 185582680 -65105174 - Charlie8 DNA MER1_type -1 2416 2349 1394 284 41 17 chr2 185582680 185583148 -65104706 - Charlie8 DNA MER1_type -1878 539 61 3209 198 61 19 chr2 185583160 185583897 -65103957 + L1ME2 LINE L1 5383 6310 -24 1782 158 0 40 chr2 185583915 185584213 -65103641 - AluJb SINE Alu -23 289 4 353 226 54 99 chr2 185584233 185584454 -65103400 + L1MC4 LINE L1 7832 8042 0 576 65 0 0 chr2 185584528 185584605 -65103249 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 784 164 8 22 chr2 185584605 185584739 -65103115 - FLAM_A SINE Alu -1 132 1 521 316 65 14 chr2 185585498 185585713 -65102141 - MIR SINE MIR -6 256 31 2324 78 0 59 chr2 185586630 185586952 -65100902 - AluY SINE Alu -8 303 1 1901 162 0 10 chr2 185586997 185587300 -65100554 - AluJb SINE Alu -12 300 1 252 354 35 9 chr2 185587608 185587721 -65100133 + MIR SINE MIR 16 131 -131 351 214 0 0 chr2 185588278 185588348 -65099506 - MIR SINE MIR -129 133 64 977 229 132 18 chr2 185589286 185589566 -65098288 - L1ME2 LINE L1 -9 6155 5844 303 299 97 30 chr2 185589568 185589702 -65098152 - MIR SINE MIR -75 187 45 760 231 143 6 chr2 185592356 185592538 -65095316 - MER63A DNA MER1_type 0 210 4 438 200 0 32 chr2 185592754 185592849 -65095005 - L1MA10 LINE L1 -2 6332 6241 240 278 28 28 chr2 185592849 185592921 -65094933 + LTR35 LTR ERV1 3 74 -544 620 229 74 39 chr2 185593044 185593370 -65094484 + LTR35 LTR ERV1 350 616 -2 808 218 23 51 chr2 185593370 185593586 -65094268 - L1MA10 LINE L1 -86 6248 6039 224 261 43 0 chr2 185594958 185595027 -65092827 + MIR SINE MIR 61 132 -130 2142 109 7 0 chr2 185595244 185595527 -65092327 - AluSx SINE Alu -27 285 1 2439 45 0 29 chr2 185597251 185597559 -65090295 + AluY SINE Alu 1 299 -12 456 321 45 113 chr2 185597777 185598157 -65089697 + L2 LINE L2 2919 3272 0 2520 81 0 0 chr2 185598172 185598481 -65089373 + AluSg SINE Alu 1 309 -1 26 50 0 0 chr2 185598666 185598706 -65089148 + AT_rich Low_complexity Low_complexity 1 40 0 2201 69 35 0 chr2 185598709 185598997 -65088857 + AluSp SINE Alu 1 298 -15 3717 115 66 16 chr2 185599493 185599545 -65088309 - L1MA3 LINE L1 -2 6303 6255 1791 181 0 7 chr2 185599545 185599844 -65088010 - AluJb SINE Alu -15 297 1 3717 115 66 16 chr2 185599844 185600683 -65087171 - L1MA3 LINE L1 -50 6255 5302 686 230 0 15 chr2 185600904 185601039 -65086815 + MIR SINE MIR 13 145 -117 1523 163 61 4 chr2 185603012 185603276 -65084578 - AluJo SINE Alu -18 294 16 2358 101 0 7 chr2 185603848 185604155 -65083699 + AluSg SINE Alu 1 305 -5 2014 149 3 10 chr2 185604883 185605191 -65082663 - AluJb SINE Alu -6 306 1 1630 171 59 18 chr2 185605420 185605745 -65082109 - L1MB5 LINE L1 0 6174 5833 2340 105 38 32 chr2 185605745 185606116 -65081738 + MER83C LTR ERV1 1 373 0 1630 171 59 18 chr2 185606116 185606130 -65081724 - L1MB5 LINE L1 -341 5833 5821 204 359 0 31 chr2 185608082 185608146 -65079708 + L2 LINE L2 3116 3177 -95 296 203 14 29 chr2 185608298 185608367 -65079487 + L2 LINE L2 3236 3303 -10 2240 121 0 0 chr2 185608371 185608678 -65079176 + AluSx SINE Alu 1 307 -5 211 287 191 7 chr2 185609353 185609489 -65078365 + MIR3 SINE MIR 16 176 -32 2178 115 21 0 chr2 185610167 185610453 -65077401 - AluSx SINE Alu -20 292 1 2044 109 0 4 chr2 185611041 185611315 -65076539 + AluSx SINE Alu 1 273 -39 21 36 0 0 chr2 185613649 185613677 -65074177 + AT_rich Low_complexity Low_complexity 1 28 0 2377 101 0 0 chr2 185614377 185614684 -65073170 - AluSx SINE Alu -5 307 1 252 243 97 35 chr2 185614713 185614857 -65072997 - MER20B DNA MER1_type -629 154 2 825 231 126 25 chr2 185615742 185616028 -65071826 + L2 LINE L2 2997 3311 -2 711 256 88 17 chr2 185616544 185616782 -65071072 - MIR SINE MIR -1 261 7 1225 173 5 18 chr2 185617768 185617988 -65069866 - AluJo SINE Alu -8 304 88 195 167 0 0 chr2 185618484 185618526 -65069328 + (CAT)n Simple_repeat Simple_repeat 3 44 0 26 0 0 0 chr2 185619209 185619235 -65068619 + AT_rich Low_complexity Low_complexity 1 26 0 2243 98 0 3 chr2 185619912 185620209 -65067645 - AluSg SINE Alu -14 296 1 294 297 103 40 chr2 185623148 185623323 -65064531 - MIR SINE MIR -12 250 65 190 309 117 0 chr2 185623335 185623429 -65064425 + MIR SINE MIR 69 173 -89 346 293 15 25 chr2 185623501 185623630 -65064224 - MER5A DNA MER1_type -50 139 1 217 227 0 23 chr2 185623630 185623672 -65064182 + L3 LINE CR1 1526 1566 -11 290 238 212 78 chr2 185626282 185626513 -65061341 + MIR SINE MIR 1 262 0 29 0 0 0 chr2 185626928 185626957 -65060897 + AT_rich Low_complexity Low_complexity 1 29 0 1727 175 19 16 chr2 185627170 185627479 -65060375 - AluJb SINE Alu -2 310 1 219 294 57 75 chr2 185627601 185627829 -65060025 + L2 LINE L2 3089 3312 -1 257 285 62 140 chr2 185627939 185628070 -65059784 - L2 LINE L2 -14 3258 3118 2362 69 7 0 chr2 185628070 185628361 -65059493 - AluY SINE Alu -18 293 1 257 285 62 140 chr2 185628361 185628629 -65059225 - L2 LINE L2 -154 3118 2890 646 197 8 0 chr2 185628721 185628843 -65059011 - FLAM_C SINE Alu -15 128 6 2322 84 3 10 chr2 185629628 185629926 -65057928 - AluSp SINE Alu -17 296 1 773 138 0 0 chr2 185630793 185630923 -65056931 + L1PA15 LINE L1 6036 6165 0 1915 153 7 0 chr2 185631584 185631879 -65055975 - AluJo SINE Alu -15 297 1 267 322 33 0 chr2 185632318 185632408 -65055446 - MIR SINE MIR -110 152 60 1879 124 7 4 chr2 185632505 185632780 -65055074 - AluSx SINE Alu -30 282 7 183 80 0 0 chr2 185634390 185634415 -65053439 + (CAAGC)n Simple_repeat Simple_repeat 5 29 0 2649 52 0 0 chr2 185634866 185635175 -65052679 - AluY SINE Alu -2 309 1 678 196 48 29 chr2 185635178 185635387 -65052467 - L1MC5 LINE L1 -30 7931 7719 1011 247 39 0 chr2 185635586 185635817 -65052037 + MIR SINE MIR 2 241 -21 28 29 0 0 chr2 185635861 185635896 -65051958 + AT_rich Low_complexity Low_complexity 1 35 0 1537 242 106 34 chr2 185636837 185637515 -65050339 + MER20B DNA MER1_type 57 783 0 23 54 0 0 chr2 185638330 185638367 -65049487 + AT_rich Low_complexity Low_complexity 1 37 0 399 252 13 0 chr2 185638897 185639036 -65048818 + L1MD3 LINE L1 6201 6292 -67 1105 83 0 0 chr2 185639064 185639197 -65048657 + AluSq/x SINE Alu 1 133 -179 1037 167 24 0 chr2 185639198 185639366 -65048488 - AluJb SINE Alu -24 288 117 238 122 20 0 chr2 185639367 185639416 -65048438 + L1MD3 LINE L1 7936 7985 -10 25 0 0 0 chr2 185640234 185640259 -65047595 + AT_rich Low_complexity Low_complexity 1 25 0 207 125 0 0 chr2 185640293 185640333 -65047521 + (A)n Simple_repeat Simple_repeat 1 40 0 482 299 108 26 chr2 185642894 185643125 -65044729 - MIR SINE MIR 0 262 13 189 0 0 0 chr2 185644786 185644807 -65043047 + (T)n Simple_repeat Simple_repeat 1 21 0 560 51 13 13 chr2 185645668 185645747 -65042107 + MADE1 DNA Mariner 1 79 -1 205 267 17 0 chr2 185646779 185646839 -65041015 + (CATA)n Simple_repeat Simple_repeat 4 64 0 537 171 21 57 chr2 185646974 185647114 -65040740 + MER58C DNA MER1_type 72 206 -9 192 40 0 0 chr2 185647708 185647733 -65040121 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 219 114 0 0 chr2 185649510 185649545 -65038309 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 484 328 57 94 chr2 185649546 185650221 -65037633 - L2 LINE L2 -12 3260 2458 214 305 232 29 chr2 185650298 185650570 -65037284 - L2 LINE L2 -865 2449 2123 22 0 0 0 chr2 185650755 185650777 -65037077 + AT_rich Low_complexity Low_complexity 1 22 0 317 250 135 50 chr2 185652025 185652285 -65035569 + L1ME4a LINE L1 5616 5897 -224 2240 108 3 0 chr2 185654740 185655036 -65032818 - AluSx SINE Alu -15 297 1 1818 128 45 21 chr2 185655079 185655369 -65032485 - AluSx SINE Alu -15 297 1 10708 212 53 40 chr2 185657613 185657896 -65029958 - L1MB7 LINE L1 -21 6232 5954 1626 150 0 90 chr2 185657896 185658230 -65029624 - AluJo SINE Alu -8 304 1 10708 212 53 40 chr2 185658230 185658618 -65029236 - L1MB7 LINE L1 -299 5954 5572 504 197 7 92 chr2 185658618 185658760 -65029094 - FLAM_A SINE Alu -3 130 1 10708 212 53 40 chr2 185658760 185659290 -65028564 - L1MB7 LINE L1 -681 5572 5050 1798 155 3 44 chr2 185659290 185659606 -65028248 - AluJb SINE Alu -9 303 1 10708 212 53 40 chr2 185659606 185660256 -65027598 - L1MB7 LINE L1 -1203 5050 4410 324 0 0 0 chr2 185660256 185660292 -65027562 + (TG)n Simple_repeat Simple_repeat 1 36 0 10708 212 53 40 chr2 185660292 185660575 -65027279 - L1MB7 LINE L1 -1843 4410 4132 2371 87 3 13 chr2 185660575 185660885 -65026969 - AluY SINE Alu -4 307 1 10708 212 53 40 chr2 185660885 185661349 -65026505 - L1MB7 LINE L1 -2121 4132 3675 1986 133 7 0 chr2 185661349 185661635 -65026219 - AluSx SINE Alu -24 288 1 10708 212 53 40 chr2 185661635 185662271 -65025583 - L1MB7 LINE L1 -2578 3675 3049 2115 74 67 14 chr2 185662271 185662554 -65025300 + AluSx SINE Alu 4 301 -11 10708 212 53 40 chr2 185662554 185663630 -65024224 - L1MB7 LINE L1 -3204 3049 1900 4312 50 2 9 chr2 185665244 185665788 -65022066 + L1PA7 LINE L1 5608 6147 -7 408 20 0 0 chr2 185666794 185666843 -65021011 + (CA)n Simple_repeat Simple_repeat 2 50 0 2276 90 23 0 chr2 185666908 185667207 -65020647 + AluSc SINE Alu 1 306 -3 396 305 93 20 chr2 185667435 185667586 -65020268 - MIR3 SINE MIR -41 167 6 414 305 73 0 chr2 185669152 185669303 -65018551 + MIR SINE MIR 63 224 -38 1888 145 14 10 chr2 185670269 185670559 -65017295 - AluJo SINE Alu -21 291 1 55 62 0 0 chr2 185671852 185671949 -65015905 + AT_rich Low_complexity Low_complexity 1 97 0 2603 42 0 10 chr2 185672783 185673095 -65014759 + AluY SINE Alu 1 309 -2 2291 185 19 31 chr2 185673576 185674022 -65013832 + L1MB4 LINE L1 5667 6108 -72 1877 157 3 17 chr2 185674022 185674322 -65013532 + AluJb SINE Alu 1 296 -16 2291 185 19 31 chr2 185674322 185674395 -65013459 + L1MB4 LINE L1 6108 6180 0 1899 103 0 31 chr2 185674577 185674838 -65013016 - AluSx SINE Alu -26 286 34 4006 86 24 57 chr2 185675420 185675766 -65012088 + L1PA15 LINE L1 5125 5481 -684 2070 89 4 0 chr2 185675766 185676035 -65011819 + AluSg SINE Alu 27 296 -14 4006 86 24 57 chr2 185676035 185676448 -65011406 + L1PA15 LINE L1 5481 5860 -305 460 123 0 0 chr2 185676447 185676512 -65011342 + L1PA15 LINE L1 5796 5860 -305 * 2461 106 14 3 chr2 185676512 185676869 -65010985 + L1PA15 LINE L1 5796 6157 -8 2443 86 0 0 chr2 185677291 185677594 -65010260 - AluSq SINE Alu -10 303 1 228 233 0 0 chr2 185677912 185677972 -65009882 + L1ME4a LINE L1 6059 6118 -3 23 0 0 0 chr2 185679555 185679578 -65008276 + AT_rich Low_complexity Low_complexity 1 23 0 1823 159 28 0 chr2 185680308 185680598 -65007256 + AluJb SINE Alu 1 298 -14 257 75 25 0 chr2 185680604 185680644 -65007210 + (GGAAA)n Simple_repeat Simple_repeat 4 44 0 213 302 31 10 chr2 185680912 185681008 -65006846 + MIR3 SINE MIR 98 195 -13 200 184 0 0 chr2 185681045 185681083 -65006771 + L2 LINE L2 3272 3309 -4 517 265 59 0 chr2 185681108 185681244 -65006610 + MIR SINE MIR 23 166 -96 485 250 98 37 chr2 185681754 185681998 -65005856 - MIR SINE MIR 0 262 4 189 269 58 0 chr2 185682707 185682759 -65005095 - MIR3 SINE MIR -1 207 153 406 215 13 0 chr2 185682929 185683008 -65004846 + Tigger2 DNA MER2_type 2639 2718 0 2257 103 3 7 chr2 185683241 185683551 -65004303 + MER1B DNA MER1_type 31 339 0 448 262 147 92 chr2 185683691 185684126 -65003728 - MLT1J LTR MaLR -17 494 36 577 267 19 19 chr2 185684494 185684655 -65003199 - L2 LINE L2 -3 3310 3150 1990 147 10 0 chr2 185685514 185685806 -65002048 + AluSx SINE Alu 1 295 -17 1014 249 99 3 chr2 185686011 185686324 -65001530 - MER2 DNA MER2_type 0 344 2 291 266 113 24 chr2 185686382 185686506 -65001348 - L3 LINE CR1 -3 1574 1440 650 296 123 0 chr2 185688103 185688323 -64999531 - MIR SINE MIR -1 261 15 301 352 76 0 chr2 185688499 185688644 -64999210 + MIR3 SINE MIR 38 193 -15 339 191 0 101 chr2 185688652 185688741 -64999113 - MER5B DNA MER1_type -84 94 15 568 224 0 0 chr2 185688741 185688857 -64998997 - L1M4 LINE L1 -579 5599 5484 291 330 183 15 chr2 185688904 185689101 -64998753 + MIR SINE MIR 31 260 -2 2056 122 14 0 chr2 185689133 185689421 -64998433 + AluSg SINE Alu 1 292 -18 1035 147 198 7 chr2 185690473 185690723 -64997131 - L1MC2 LINE L1 0 7990 6247 285 214 57 0 chr2 185690816 185690886 -64996968 + MIR SINE MIR 183 256 -6 2510 61 0 0 chr2 185692109 185692404 -64995450 + AluSc SINE Alu 1 295 -14 376 227 13 0 chr2 185692514 185692589 -64995265 + MLT1J LTR MaLR 101 176 -335 1185 195 38 12 chr2 185692593 185693592 -64994262 + L1MB8 LINE L1 4931 6163 -15 2738 225 82 39 chr2 185693793 185694728 -64993126 - L1ME2 LINE L1 -8 6967 5784 393 74 0 0 chr2 185694728 185694782 -64993072 - Alu SINE Alu -1 301 248 2738 225 82 39 chr2 185694782 185695286 -64992568 - L1ME2 LINE L1 -1191 5784 5303 1005 171 0 11 chr2 185695286 185695461 -64992393 - AluJb SINE Alu -20 292 120 341 169 0 13 chr2 185695461 185695503 -64992351 + T-rich Low_complexity Low_complexity 3 45 -33 2549 68 0 0 chr2 185695503 185695812 -64992042 - AluY SINE Alu -2 309 1 341 169 0 13 chr2 185695812 185695846 -64992008 + T-rich Low_complexity Low_complexity 45 78 0 727 153 0 0 chr2 185695846 185695964 -64991890 - AluJb SINE Alu -178 134 17 1912 198 52 14 chr2 185695979 185696464 -64991390 - L1ME2 LINE L1 -1646 5311 4809 392 219 0 0 chr2 185696492 185696565 -64991289 - L1 LINE L1 -3418 3539 3467 1289 199 24 40 chr2 185696566 185696938 -64990916 - L1 LINE L1 -3576 3381 3016 1025 177 0 0 chr2 185696939 185697114 -64990740 - FRAM SINE Alu -2 174 1 1324 250 136 55 chr2 185697114 185697507 -64990347 - L1ME2 LINE L1 -3928 3029 2669 2280 92 3 0 chr2 185697507 185697802 -64990052 - AluY SINE Alu -15 296 1 1324 250 136 55 chr2 185697802 185698722 -64989132 - L1ME2 LINE L1 -4288 2669 1468 24 53 0 0 chr2 185698810 185698848 -64989006 + AT_rich Low_complexity Low_complexity 1 38 0 908 196 32 7 chr2 185698990 185699274 -64988580 - L1MD2 LINE L1 0 6359 6030 2090 126 3 7 chr2 185699344 185699638 -64988216 + AluSp SINE Alu 1 293 -20 2222 89 7 0 chr2 185699684 185699990 -64987864 + AluSq SINE Alu 1 308 0 498 292 73 36 chr2 185700570 185700762 -64987092 + L3 LINE CR1 1373 1571 -6 193 200 0 123 chr2 185701372 185701437 -64986417 + MIR3 SINE MIR 103 159 -49 2060 123 0 17 chr2 185701726 185702026 -64985828 + AluSg SINE Alu 2 296 -14 239 320 72 10 chr2 185704284 185704381 -64983473 - MIR SINE MIR -112 150 48 * 429 343 181 28 chr2 185704374 185704738 -64983116 - L3 LINE CR1 -526 1051 632 559 234 42 13 chr2 185704930 185705122 -64982732 - MIR SINE MIR -5 257 13 544 310 103 23 chr2 185705230 185705424 -64982430 + L3 LINE CR1 1190 1418 -159 1617 131 3 119 chr2 185705424 185705564 -64982290 + AluSx SINE Alu 1 81 -231 348 24 0 0 chr2 185705564 185705605 -64982249 + (TA)n Simple_repeat Simple_repeat 1 41 0 1617 131 3 119 chr2 185705605 185705800 -64982054 + AluSx SINE Alu 81 297 -15 544 310 103 23 chr2 185705800 185705905 -64981949 + L3 LINE CR1 1418 1513 -64 381 229 40 134 chr2 185705927 185705977 -64981877 + MER5A DNA MER1_type 1 54 -135 1957 76 0 27 chr2 185705977 185706240 -64981614 - AluY SINE Alu -4 307 52 381 229 40 134 chr2 185706240 185706390 -64981464 + MER5A DNA MER1_type 54 182 -7 204 300 143 0 chr2 185707001 185707071 -64980783 - L2 LINE L2 -10 3303 3224 726 267 108 17 chr2 185707086 185707318 -64980536 - MIR SINE MIR -8 254 2 192 208 151 19 chr2 185709450 185709503 -64978351 - MIR SINE MIR -61 147 88 567 292 19 4 chr2 185709676 185709933 -64977921 - L1ME4a LINE L1 -259 5862 5602 310 256 8 64 chr2 185710022 185710147 -64977707 - L1ME4a LINE L1 -822 5420 5303 445 239 62 31 chr2 185710332 185710462 -64977392 + MIR SINE MIR 17 150 -112 462 191 151 13 chr2 185710471 185710623 -64977231 + MER104 DNA Tc2 7 179 -1 315 204 153 20 chr2 185710623 185710721 -64977133 + MIR SINE MIR 152 262 0 2058 97 43 17 chr2 185710778 185711077 -64976777 + AluSq SINE Alu 1 307 -6 22 0 0 0 chr2 185711145 185711167 -64976687 + AT_rich Low_complexity Low_complexity 1 22 0 2006 129 4 0 chr2 185711362 185711681 -64976173 + AluSx SINE Alu 1 320 0 267 293 103 17 chr2 185712007 185712123 -64975731 + MIR SINE MIR 51 176 -86 2410 109 0 0 chr2 185713314 185713626 -64974228 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 185713826 185713849 -64974005 + AT_rich Low_complexity Low_complexity 1 23 0 2455 88 0 0 chr2 185714032 185714340 -64973514 + AluY SINE Alu 1 308 -3 318 231 19 28 chr2 185714867 185714975 -64972879 + LTR41 LTR ERVL 1 107 -666 1050 186 11 0 chr2 185714978 185715161 -64972693 - FRAM SINE Alu 0 176 1 285 282 14 49 chr2 185715607 185715749 -64972105 + LTR41 LTR ERVL 587 723 -50 438 323 69 27 chr2 185716081 185716415 -64971439 + ERVL LTR ERVL 351 698 -5066 1508 292 71 53 chr2 185716621 185717620 -64970234 + ERVL LTR ERVL 1001 2017 -3747 * 3120 276 60 35 chr2 185717613 185718307 -64969547 + ERVL LTR ERVL 3638 4313 -1451 2450 44 3 3 chr2 185718307 185718602 -64969252 + AluY SINE Alu 1 295 -16 3120 276 60 35 chr2 185718602 185718987 -64968867 + ERVL LTR ERVL 4313 4687 -1077 2341 75 7 13 chr2 185718987 185719295 -64968559 + AluSc SINE Alu 1 306 -3 3120 276 60 35 chr2 185719295 185719885 -64967969 + ERVL LTR ERVL 4687 5411 -353 201 217 43 0 chr2 185719925 185719971 -64967883 + GA-rich Low_complexity Low_complexity 3 50 0 744 218 199 73 chr2 185720342 185721015 -64966839 + LTR41 LTR ERVL 1 758 -15 30 45 0 0 chr2 185722370 185722414 -64965440 + AT_rich Low_complexity Low_complexity 1 44 0 1730 192 0 3 chr2 185722414 185722716 -64965138 + AluJb SINE Alu 1 301 -11 301 179 51 0 chr2 185723047 185723125 -64964729 - Charlie8 DNA MER1_type -2270 147 66 1331 132 97 4 chr2 185723575 185723833 -64964021 + L1MA8 LINE L1 6005 6286 -5 747 171 0 16 chr2 185723842 185723965 -64963889 + FLAM_C SINE Alu 1 121 -22 397 160 227 8 chr2 185723987 185724106 -64963748 + MSTA LTR MaLR 211 355 -73 13758 186 23 9 chr2 185724135 185729563 -64958291 + L1PB1 LINE L1 1332 6863 -4 1275 144 0 0 chr2 185729571 185729751 -64958103 + AluJb SINE Alu 132 311 -1 470 49 49 0 chr2 185729751 185729833 -64958021 + (TA)n Simple_repeat Simple_repeat 2 87 0 242 322 60 16 chr2 185731230 185731413 -64956441 - L1MC/D LINE L1 -2164 5644 5454 2343 73 23 0 chr2 185731564 185731866 -64955988 + AluSp SINE Alu 2 310 -3 706 296 82 4 chr2 185732143 185732376 -64955478 - MIR SINE MIR -10 252 2 22 35 0 0 chr2 185732423 185732452 -64955402 + AT_rich Low_complexity Low_complexity 1 29 0 2365 272 138 6 chr2 185732467 185733489 -64954365 + L2 LINE L2 82 1288 -2026 1483 246 43 28 chr2 185733496 185734036 -64953818 - L1MC/D LINE L1 -1195 4951 4404 2085 155 69 11 chr2 185734071 185734510 -64953344 - L1MB4 LINE L1 -20 6160 5709 1520 282 88 19 chr2 185734547 185735269 -64952585 + L2 LINE L2 2348 3135 -178 2812 203 16 11 chr2 185735269 185735894 -64951960 - L1MD3 LINE L1 -5 7990 7363 433 333 37 7 chr2 185735949 185736084 -64951770 + L2 LINE L2 3175 3313 0 191 295 39 13 chr2 185736313 185736391 -64951463 + MIR SINE MIR 180 259 -3 1696 99 86 0 chr2 185736910 185737153 -64950701 - AluSq SINE Alu 0 313 50 209 385 0 26 chr2 185737841 185737919 -64949935 - L2 LINE L2 -21 3251 3176 398 275 228 0 chr2 185737926 185738097 -64949757 + L3 LINE CR1 1267 1476 -101 305 261 157 0 chr2 185739614 185739729 -64948125 + MIR SINE MIR 80 212 -50 517 241 0 23 chr2 185740037 185740170 -64947684 - MIR SINE MIR -10 252 123 843 177 54 21 chr2 185740489 185740675 -64947179 + AluJo SINE Alu 120 311 -1 186 43 0 0 chr2 185740701 185740724 -64947130 + (GGAA)n Simple_repeat Simple_repeat 2 24 0 1156 142 5 16 chr2 185740995 185741185 -64946669 - MER5A DNA MER1_type -1 188 1 1915 135 84 0 chr2 185741356 185741689 -64946165 - MER46B DNA MER2_type 0 236 1 21 57 0 0 chr2 185741965 185742000 -64945854 + AT_rich Low_complexity Low_complexity 1 35 0 1975 95 81 3 chr2 185742611 185742895 -64944959 - AluSc SINE Alu -3 306 1 2273 104 3 0 chr2 185743356 185743665 -64944189 + AluY SINE Alu 1 310 -1 347 213 11 11 chr2 185744145 185744239 -64943615 - L1ME4a LINE L1 -202 5919 5826 474 227 106 0 chr2 185744331 185744472 -64943382 - L1ME4a LINE L1 -439 5682 5527 2956 228 73 56 chr2 185744602 185745842 -64942012 + L1MC4 LINE L1 6765 8025 -17 4357 22 2 0 chr2 185745845 185746353 -64941501 - L1PA2 LINE L1 -4 6151 5643 205 306 14 0 chr2 185747476 185747548 -64940306 + MIR SINE MIR 89 161 -101 468 247 105 118 chr2 185749946 185750121 -64937733 + L1MC4 LINE L1 7460 7636 -406 2014 120 35 0 chr2 185750121 185750404 -64937450 + AluSx SINE Alu 1 293 -19 468 247 105 118 chr2 185750404 185750819 -64937035 + L1MC4 LINE L1 7636 8042 0 2979 246 57 48 chr2 185751356 185752533 -64935321 - HAL1 LINE L1 -38 2469 1283 324 244 38 76 chr2 185752790 185752921 -64934933 + L2 LINE L2 3188 3313 0 2308 125 0 0 chr2 185753898 185754209 -64933645 + AluSx SINE Alu 1 311 -1 188 238 392 0 chr2 185755074 185755208 -64932646 + MIR SINE MIR 63 250 -12 21 0 0 0 chr2 185755757 185755778 -64932076 + AT_rich Low_complexity Low_complexity 1 21 0 639 176 118 0 chr2 185755785 185755904 -64931950 + AluJo SINE Alu 1 133 -169 1211 128 16 5 chr2 185756459 185756647 -64931207 + AluJo SINE Alu 120 309 -3 1406 179 60 24 chr2 185757722 185757974 -64929880 + AluJo SINE Alu 37 297 -15 748 218 0 0 chr2 185758668 185758801 -64929053 + FLAM_A SINE Alu 1 133 0 26 30 0 0 chr2 185758888 185758921 -64928933 + AT_rich Low_complexity Low_complexity 1 33 0 870 216 96 48 chr2 185759302 185759653 -64928201 + MSTD LTR MaLR 1 396 0 382 282 105 17 chr2 185759734 185759773 -64928081 - MIR SINE MIR -37 225 191 7499 128 47 32 chr2 185759773 185760985 -64926869 + Tigger3b DNA MER2_type 2 1231 0 382 282 105 17 chr2 185760985 185761126 -64926728 - MIR SINE MIR -71 191 29 248 0 31 0 chr2 185761778 185761810 -64926044 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 180 0 0 0 chr2 185762594 185762614 -64925240 + (T)n Simple_repeat Simple_repeat 1 20 0 219 69 0 0 chr2 185763782 185763811 -64924043 + (CTCG)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr2 185763811 185763835 -64924019 + GC_rich Low_complexity Low_complexity 1 24 0 22 70 0 0 chr2 185764019 185764062 -64923792 + GC_rich Low_complexity Low_complexity 1 43 0 317 319 132 57 chr2 185764791 185765027 -64922827 - L2 LINE L2 -531 2783 2566 1621 170 83 0 chr2 185765027 185765315 -64922539 + AluJb SINE Alu 1 312 0 317 319 132 57 chr2 185765315 185765661 -64922193 - L2 LINE L2 -748 2566 2157 364 291 133 18 chr2 185765920 185766085 -64921769 + MIR3 SINE MIR 20 203 -5 641 317 116 48 chr2 185767336 185767733 -64920121 - L2 LINE L2 -4 3268 2845 379 304 68 37 chr2 185767776 185767967 -64919887 - MIR SINE MIR 0 262 66 1870 149 187 31 chr2 185767991 185768107 -64919747 - Charlie1b DNA MER1_type -2239 522 425 2224 97 0 20 chr2 185768107 185768407 -64919447 + AluSg SINE Alu 1 294 -16 1870 149 187 31 chr2 185768407 185768739 -64919115 - Charlie1b DNA MER1_type -2336 425 4 192 301 0 97 chr2 185768795 185768888 -64918966 + MIR3 SINE MIR 2 85 -123 2279 110 0 0 chr2 185769078 185769370 -64918484 - AluSg SINE Alu -18 292 1 871 337 112 16 chr2 185769500 185769948 -64917906 + L3 LINE CR1 267 757 -820 1424 171 45 8 chr2 185770241 185770487 -64917367 + AluJb SINE Alu 39 293 -19 320 274 21 11 chr2 185770853 185770948 -64916906 - MIR SINE MIR -109 153 58 259 282 0 0 chr2 185772616 185772687 -64915167 - L3 LINE CR1 -859 718 648 21 0 0 0 chr2 185773068 185773089 -64914765 + AT_rich Low_complexity Low_complexity 1 21 0 36 53 0 0 chr2 185773194 185773251 -64914603 + AT_rich Low_complexity Low_complexity 1 57 0 432 0 0 0 chr2 185773270 185773318 -64914536 + (TA)n Simple_repeat Simple_repeat 1 48 0 1783 167 0 20 chr2 185773322 185773616 -64914238 - AluJo SINE Alu -24 288 1 249 308 17 25 chr2 185774004 185774124 -64913730 + MIR SINE MIR 88 206 -56 1813 160 21 0 chr2 185774520 185774807 -64913047 - AluSx SINE Alu -15 297 5 276 130 0 0 chr2 185775307 185775353 -64912501 + (CA)n Simple_repeat Simple_repeat 1 46 0 2525 56 0 13 chr2 185776087 185776392 -64911462 + AluSp SINE Alu 2 302 -11 710 241 74 10 chr2 185776412 185776629 -64911225 + MIR SINE MIR 34 262 0 200 188 0 0 chr2 185776665 185776697 -64911157 + (TTG)n Simple_repeat Simple_repeat 2 33 0 318 250 86 35 chr2 185776712 185776828 -64911026 - HAL1 LINE L1 -1575 932 811 1581 234 9 108 chr2 185777107 185777441 -64910413 - AluY SINE Alu 0 301 1 2130 113 0 10 chr2 185777562 185777877 -64909977 + AluSq SINE Alu 1 312 0 369 0 0 0 chr2 185777883 185777924 -64909930 + (CA)n Simple_repeat Simple_repeat 2 42 0 216 0 0 0 chr2 185777923 185777947 -64909907 + (TA)n Simple_repeat Simple_repeat 2 25 0 * 630 88 0 0 chr2 185778215 185778295 -64909559 + MADE1 DNA Mariner 1 80 0 1865 175 3 0 chr2 185778395 185778698 -64909156 - AluJo SINE Alu -8 304 1 435 311 156 9 chr2 185779593 185779805 -64908049 + MIR SINE MIR 8 250 -12 344 238 156 50 chr2 185780941 185781101 -64906753 - MIR SINE MIR -7 255 79 234 237 53 40 chr2 185781177 185781253 -64906601 + MER91 DNA MER1_type 114 196 0 1040 277 29 59 chr2 185781444 185781955 -64905899 + MLT1H LTR MaLR 3 543 -6 967 276 35 30 chr2 185781966 185782335 -64905519 + MLT2C2 LTR ERVL 83 453 -11 2576 161 15 2 chr2 185783406 185783951 -64903903 + L1MB4 LINE L1 5552 6180 0 348 299 153 4 chr2 185784225 185784469 -64903385 + L2 LINE L2 2788 3078 -194 2347 99 3 0 chr2 185784510 185784812 -64903042 - AluSc SINE Alu -5 304 2 197 0 71 0 chr2 185784944 185784972 -64902882 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 360 200 48 48 chr2 185786246 185786351 -64901503 + MER103 DNA DNA 60 164 -2 2688 172 11 13 chr2 185786592 185787064 -64900790 + L1MB7 LINE L1 5698 6168 -16 22 35 0 0 chr2 185787265 185787294 -64900560 + AT_rich Low_complexity Low_complexity 1 29 0 513 247 57 70 chr2 185789115 185789342 -64898512 - MER102b DNA MER1_type -35 306 83 27 62 0 0 chr2 185790759 185790807 -64897047 + AT_rich Low_complexity Low_complexity 1 48 0 411 222 94 80 chr2 185792002 185792051 -64895803 - L1ME4a LINE L1 -5 6116 6069 2668 40 0 0 chr2 185792051 185792352 -64895502 + AluY SINE Alu 1 301 -10 411 222 94 80 chr2 185792352 185792590 -64895264 - L1ME4a LINE L1 -52 6069 5825 689 280 154 115 chr2 185794143 185794377 -64893477 - L3 LINE CR1 -22 1555 1332 384 95 111 0 chr2 185794377 185794440 -64893414 + MER41B LTR ERV1 259 328 -307 689 280 154 115 chr2 185794440 185794850 -64893004 - L3 LINE CR1 -245 1332 821 973 212 102 140 chr2 185795709 185796100 -64891754 + MER66A LTR ERV1 106 468 -10 2133 113 31 0 chr2 185797381 185797672 -64890182 - AluSg SINE Alu -8 302 3 297 270 0 0 chr2 185797778 185797841 -64890013 - L2 LINE L2 -5 3308 3246 500 246 35 147 chr2 185797845 185798247 -64889607 - L2 LINE L2 -37 3276 2920 21 36 0 0 chr2 185798985 185799013 -64888841 + AT_rich Low_complexity Low_complexity 1 28 0 2276 107 7 0 chr2 185799819 185800118 -64887736 - AluSq SINE Alu -12 301 1 666 259 153 26 chr2 185800319 185800548 -64887306 + MLT1J LTR MaLR 141 422 -89 2366 63 7 26 chr2 185800548 185800850 -64887004 - AluY SINE Alu -15 296 1 666 259 153 26 chr2 185800850 185800933 -64886921 + MLT1J LTR MaLR 422 493 -18 225 0 0 0 chr2 185801261 185801286 -64886568 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 2195 54 25 0 chr2 185801286 185801563 -64886291 - L1PA8 LINE L1 -25 6147 5864 223 259 100 11 chr2 185802197 185802315 -64885539 - MIR SINE MIR -63 145 19 834 177 0 7 chr2 185802641 185802788 -64885066 + FRAM SINE Alu 1 146 -30 21 82 0 0 chr2 185802798 185802847 -64885007 + AT_rich Low_complexity Low_complexity 1 49 0 2433 128 22 66 chr2 185803998 185804373 -64883481 + Tigger2a DNA MER2_type 1 354 -2354 1343 184 80 70 chr2 185804373 185804497 -64883357 + AluJo SINE Alu 1 122 -180 2445 66 0 10 chr2 185804497 185804799 -64883055 - AluY SINE Alu -12 299 1 1343 184 80 70 chr2 185804799 185804973 -64882881 + AluJo SINE Alu 122 302 0 2433 128 22 66 chr2 185804973 185805051 -64882803 + Tigger2a DNA MER2_type 354 434 0 333 0 0 0 chr2 185805115 185805152 -64882702 + (TG)n Simple_repeat Simple_repeat 2 38 0 1794 163 3 0 chr2 185805152 185805434 -64882420 - AluJb SINE Alu -29 283 1 433 270 32 24 chr2 185806532 185806658 -64881196 + L2 LINE L2 3183 3309 -4 275 311 76 8 chr2 185806668 185806787 -64881067 - MIR3 SINE MIR -67 141 15 745 223 23 50 chr2 185807662 185807882 -64879972 + MER20 DNA MER1_type 1 214 -5 222 366 30 10 chr2 185811019 185811120 -64876734 + MIR SINE MIR 20 122 -86 24 0 0 0 chr2 185811451 185811475 -64876379 + AT_rich Low_complexity Low_complexity 1 24 0 2328 104 0 0 chr2 185814288 185814595 -64873259 + AluSx SINE Alu 6 312 0 368 276 58 26 chr2 185815303 185815459 -64872395 + MIR SINE MIR 70 230 -32 2877 10 0 0 chr2 185815509 185815819 -64872035 + AluYa5 SINE Alu 1 310 -1 254 241 9 41 chr2 185816738 185816821 -64871033 - MIR SINE MIR -19 189 108 186 314 7 73 chr2 185816963 185817100 -64870754 + L2 LINE L2 3186 3313 0 1339 65 0 0 chr2 185818415 185818583 -64869271 - AluY SINE Alu -7 304 137 585 261 87 66 chr2 185819942 185820321 -64867533 - L2 LINE L2 0 3313 2927 225 317 200 21 chr2 185820540 185820685 -64867169 + L2 LINE L2 3102 3272 0 184 292 0 21 chr2 185823059 185823107 -64864747 - MIR SINE MIR -190 72 26 460 230 65 60 chr2 185823798 185823998 -64863856 + L1MB4 LINE L1 5979 6179 -1 249 303 169 28 chr2 185824848 185824990 -64862864 + L1ME4a LINE L1 5599 5760 -2048 253 262 28 28 chr2 185825170 185825277 -64862577 + L1ME4a LINE L1 5959 6065 -56 335 262 71 49 chr2 185825870 185826053 -64861801 + LTR33 LTR ERVL 335 521 0 249 191 0 0 chr2 185826334 185826381 -64861473 - L2 LINE L2 0 3313 3267 207 313 122 17 chr2 185826606 185826721 -64861133 - MIR SINE MIR -62 146 20 556 314 18 12 chr2 185827252 185827421 -64860433 + MIR3 SINE MIR 33 202 -6 260 306 0 0 chr2 185828302 185828374 -64859480 - L2 LINE L2 -4 3268 3197 227 309 106 0 chr2 185828594 185828688 -64859166 - MIR SINE MIR -123 139 36 351 0 0 0 chr2 185828816 185828855 -64858999 + (TG)n Simple_repeat Simple_repeat 1 39 0 416 320 66 11 chr2 185829844 185830025 -64857829 - MIR3 SINE MIR -1 207 17 596 124 0 33 chr2 185830372 185830543 -64857311 - MER46A DNA MER2_type -3 233 1 392 281 88 68 chr2 185831650 185831713 -64856141 - MIR SINE MIR -56 206 146 2006 146 70 20 chr2 185831713 185832070 -64855784 - THE1C LTR MaLR 0 375 1 392 281 88 68 chr2 185832070 185832198 -64855656 - MIR SINE MIR -116 146 11 585 284 149 22 chr2 185832264 185832486 -64855368 + MIR SINE MIR 5 254 -8 426 295 84 18 chr2 185832808 185832974 -64854880 + MIR SINE MIR 6 182 -80 2430 91 0 0 chr2 185834207 185834505 -64853349 + AluSc SINE Alu 3 300 -9 180 0 0 0 chr2 185834510 185834530 -64853324 + (CAA)n Simple_repeat Simple_repeat 2 21 0 416 256 100 74 chr2 185834730 185835000 -64852854 + L1ME LINE L1 5547 5823 -298 181 405 0 0 chr2 185835002 185835086 -64852768 + L2 LINE L2 3180 3263 -9 37 76 0 0 chr2 185835202 185835281 -64852573 + AT_rich Low_complexity Low_complexity 1 79 0 502 194 99 50 chr2 185835406 185835607 -64852247 + L1ME4a LINE L1 5840 6050 -71 252 348 61 24 chr2 185835876 185836040 -64851814 + MIR SINE MIR 14 183 -79 198 0 0 0 chr2 185838010 185838032 -64849822 + (T)n Simple_repeat Simple_repeat 1 22 0 1922 147 191 6 chr2 185838084 185838445 -64849409 + MSTA LTR MaLR 1 428 0 252 143 0 0 chr2 185839259 185839301 -64848553 + (A)n Simple_repeat Simple_repeat 1 42 0 365 115 0 0 chr2 185840940 185840992 -64846862 + MER66B LTR ERV1 295 346 -140 842 172 8 0 chr2 185841465 185841593 -64846261 - FRAM SINE Alu -47 129 1 306 305 55 18 chr2 185841853 185842017 -64845837 + L2 LINE L2 3128 3297 -16 2554 154 19 66 chr2 185842538 185843025 -64844829 + MLT1C LTR MaLR 1 464 -3 2035 106 11 3 chr2 185844446 185844730 -64843124 + AluSx SINE Alu 1 286 -26 411 38 0 0 chr2 185844731 185844784 -64843070 + (CA)n Simple_repeat Simple_repeat 2 54 0 352 297 34 8 chr2 185845510 185845628 -64842226 - MIR SINE MIR -111 151 31 380 239 32 2 chr2 185847968 185848084 -64839770 + MIR SINE MIR 39 162 -46 213 39 0 0 chr2 185849635 185849661 -64838193 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 201 74 0 0 chr2 185849981 185850008 -64837846 + (T)n Simple_repeat Simple_repeat 1 27 0 2212 160 12 12 chr2 185852234 185852578 -64835276 + MER2 DNA MER2_type 1 344 0 1879 157 37 0 chr2 185852700 185852994 -64834860 - AluJb SINE Alu -6 306 2 2176 118 6 16 chr2 185853029 185853343 -64834511 + AluSx SINE Alu 1 311 -1 684 184 24 8 chr2 185859080 185859205 -64828649 + FLAM_C SINE Alu 3 129 -14 193 336 207 7 chr2 185859492 185859787 -64828067 + L2 LINE L2 2034 2387 -927 280 317 0 42 chr2 185859824 185859966 -64827888 + L2 LINE L2 2835 2970 -302 1796 127 4 8 chr2 185860025 185860292 -64827562 - AluSq SINE Alu -47 266 1 307 265 143 10 chr2 185860484 185860582 -64827272 + MIR SINE MIR 98 208 -54 228 302 47 47 chr2 185864498 185864647 -64823207 + MIR SINE MIR 28 176 -86 592 158 0 0 chr2 185864896 185864991 -64822863 + MER53 DNA DNA 95 189 0 1811 184 3 0 chr2 185865331 185865624 -64822230 - AluJb SINE Alu -18 294 1 677 269 116 21 chr2 185865721 185865965 -64821889 + MIR SINE MIR 2 258 -4 287 315 112 37 chr2 185866259 185866554 -64821300 + L2 LINE L2 2658 2974 -340 2072 156 0 0 chr2 185866618 185866925 -64820929 + AluJo SINE Alu 6 312 0 229 312 109 7 chr2 185866938 185867076 -64820778 + L1ME4a LINE L1 5734 5885 -236 378 225 67 17 chr2 185867086 185867206 -64820648 + L1ME4a LINE L1 5966 6091 -30 218 211 0 58 chr2 185870274 185870326 -64817528 + L2 LINE L2 3216 3264 -8 212 296 0 0 chr2 185870347 185870391 -64817463 + L2 LINE L2 3142 3185 -87 228 67 0 0 chr2 185870482 185870512 -64817342 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 283 315 66 38 chr2 185870591 185870804 -64817050 + L2 LINE L2 3076 3294 -19 539 256 160 0 chr2 185873523 185873679 -64814175 + MER5A DNA MER1_type 9 189 0 349 279 22 117 chr2 185875499 185875678 -64812176 + MIR3 SINE MIR 33 194 -14 2135 149 128 10 chr2 185876756 185877139 -64810715 + MSTA LTR MaLR 1 428 0 473 219 98 41 chr2 185878126 185878249 -64809605 + L2 LINE L2 3184 3313 0 605 291 63 22 chr2 185878249 185878491 -64809363 + MIR SINE MIR 7 256 -6 24 53 0 0 chr2 185879355 185879393 -64808461 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 185879467 185879491 -64808363 + AT_rich Low_complexity Low_complexity 1 24 0 1764 141 18 28 chr2 185879936 185880220 -64807634 - AluJo SINE Alu -31 281 1 1762 201 121 37 chr2 185880472 185880935 -64806919 + MLT1D LTR MaLR 1 502 -3 268 303 50 25 chr2 185882876 185882995 -64804859 - MIR3 SINE MIR -51 157 36 2570 52 0 3 chr2 185883257 185883564 -64804290 + AluY SINE Alu 1 306 -5 424 253 170 13 chr2 185883640 185883940 -64803914 - LTR33A LTR ERVL -1 522 176 1380 257 86 45 chr2 185885605 185886139 -64801715 + L1MCb LINE L1 6 561 -5484 381 191 40 13 chr2 185886587 185886739 -64801115 + (TA)n Simple_repeat Simple_repeat 1 156 0 215 178 79 0 chr2 185886750 185886851 -64801003 + (TA)n Simple_repeat Simple_repeat 2 110 0 797 161 0 0 chr2 185887844 185887956 -64799898 + FRAM SINE Alu 1 104 -72 370 175 38 0 chr2 185887981 185888061 -64799793 - MER3 DNA MER1_type -53 156 74 870 259 143 21 chr2 185888063 185888657 -64799197 + L2 LINE L2 2584 3312 -1 188 280 93 25 chr2 185888709 185888827 -64799027 + L3b LINE CR1 1218 1343 -240 465 252 213 13 chr2 185888934 185889089 -64798765 - MER5A DNA MER1_type 0 189 4 21 36 0 0 chr2 185889548 185889576 -64798278 + AT_rich Low_complexity Low_complexity 1 28 0 2865 77 3 0 chr2 185891072 185891424 -64796430 - L1PA13 LINE L1 -19 6144 5792 1110 241 140 14 chr2 185891721 185892203 -64795651 + L1ME3A LINE L1 5593 6150 -16 184 347 138 24 chr2 185893244 185893535 -64794319 - L2 LINE L2 -113 3159 2836 414 313 132 19 chr2 185893697 185894115 -64793739 - L1ME4a LINE L1 -84 6037 5573 382 208 167 0 chr2 185896489 185896609 -64791245 - MIR SINE MIR -2 260 121 411 312 154 27 chr2 185896728 185897046 -64790808 + L2 LINE L2 2712 2988 -325 1246 231 28 28 chr2 185897046 185897370 -64790484 + MER33 DNA MER1_type 1 324 0 411 312 154 27 chr2 185897370 185897570 -64790284 + L2 LINE L2 2988 3312 -1 1145 114 154 0 chr2 185897724 185897768 -64790086 + L1MA7 LINE L1 6053 6089 -202 603 60 0 60 chr2 185897768 185897852 -64790002 + MADE1 DNA Mariner 1 79 -1 1145 114 154 0 chr2 185897852 185898008 -64789846 + L1MA7 LINE L1 6089 6284 -7 918 228 35 27 chr2 185898089 185898348 -64789506 - MIR SINE MIR 0 262 2 305 373 15 0 chr2 185898469 185898603 -64789251 - MIR SINE MIR -14 248 113 236 204 65 65 chr2 185898605 185898713 -64789141 + L1ME LINE L1 5727 5834 -287 2256 216 63 29 chr2 185898756 185899330 -64788524 + L1MC3 LINE L1 4084 4683 -1463 2459 128 86 8 chr2 185899330 185899727 -64788127 - MSTA LTR MaLR 0 428 1 2256 216 63 29 chr2 185899727 185899783 -64788071 + L1MC3 LINE L1 4683 4736 -1410 1178 176 24 0 chr2 185899779 185899989 -64787865 + L1MC3 LINE L1 7266 7480 -305 * 10746 160 86 49 chr2 185899989 185901777 -64786077 + L1MC3 LINE L1 4740 6462 -1323 282 29 0 0 chr2 185901777 185901812 -64786042 + (TG)n Simple_repeat Simple_repeat 2 36 0 10746 160 86 49 chr2 185901812 185902306 -64785548 + L1MC3 LINE L1 6462 6937 -848 257 272 0 37 chr2 185902306 185902387 -64785467 + MLT1F1 LTR MaLR 48 125 -442 10746 160 86 49 chr2 185902387 185902790 -64785064 + L1MC3 LINE L1 6937 7596 -189 1723 160 0 72 chr2 185902790 185903109 -64784745 - AluJo SINE Alu -16 296 1 10746 160 86 49 chr2 185903109 185903159 -64784695 + L1MC3 LINE L1 7596 7643 -142 482 280 16 11 chr2 185903160 185903346 -64784508 + L1MDa LINE L1 1899 2085 -4455 1708 141 15 4 chr2 185903663 185903925 -64783929 - AluSx SINE Alu -32 280 16 1855 163 0 0 chr2 185904843 185905132 -64782722 - AluJb SINE Alu -23 289 1 331 370 85 26 chr2 185905374 185905563 -64782291 + L2 LINE L2 3068 3267 -5 2352 92 0 3 chr2 185905576 185905879 -64781975 + AluSx SINE Alu 1 302 -10 784 248 87 0 chr2 185906586 185906804 -64781050 + L2 LINE L2 2372 2608 -706 1024 234 87 29 chr2 185906829 185907277 -64780577 + Charlie2 DNA MER1_type 2033 2506 -356 343 239 88 18 chr2 185907279 185907392 -64780462 + MLT1J LTR MaLR 375 495 -16 431 239 80 0 chr2 185907418 185907556 -64780298 + Charlie2 DNA MER1_type 2493 2641 -221 182 31 0 62 chr2 185908012 185908044 -64779810 + (TGGGGG)n Simple_repeat Simple_repeat 1 30 0 24 53 0 0 chr2 185908825 185908863 -64778991 + GC_rich Low_complexity Low_complexity 1 38 0 300 287 23 0 chr2 185908902 185908989 -64778865 - MIR SINE MIR -115 147 59 341 336 42 46 chr2 185909253 185909491 -64778363 + L3 LINE CR1 600 836 -741 578 305 28 19 chr2 185909997 185910210 -64777644 - MIR SINE MIR -27 235 21 278 194 14 0 chr2 185910565 185910637 -64777217 + (TA)n Simple_repeat Simple_repeat 1 73 0 1035 154 6 0 chr2 185912373 185912529 -64775325 - FRAM SINE Alu -11 165 9 2235 104 0 0 chr2 185913157 185913435 -64774419 + AluSc SINE Alu 1 278 -31 258 32 0 0 chr2 185913439 185913470 -64774384 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 728 165 12 17 chr2 185913916 185914262 -64773592 + CT-rich Low_complexity Low_complexity 1 343 0 524 248 207 14 chr2 185914264 185914409 -64773445 - AluJb SINE Alu -3 309 137 270 0 0 0 chr2 185914409 185914439 -64773415 + (TG)n Simple_repeat Simple_repeat 2 31 0 2009 113 3 78 chr2 185914748 185915083 -64772771 + AluYb8 SINE Alu 1 310 -8 345 270 132 40 chr2 185916208 185916382 -64771472 - MIR SINE MIR -2 260 71 2266 105 3 0 chr2 185916459 185916753 -64771101 + AluSx SINE Alu 1 295 -17 1421 175 98 3 chr2 185918639 185918924 -64768930 + AluJb SINE Alu 1 312 0 233 57 29 0 chr2 185919190 185919225 -64768629 + (TCCA)n Simple_repeat Simple_repeat 3 38 0 205 296 0 0 chr2 185919454 185919498 -64768356 - L2 LINE L2 -556 2758 2715 302 318 44 48 chr2 185919501 185919957 -64767897 + L1MC5 LINE L1 7478 7931 -30 244 276 146 72 chr2 185920136 185920581 -64767273 - L2 LINE L2 -824 2490 2013 386 275 242 2 chr2 185920738 185920927 -64766927 - MIR SINE MIR -18 244 10 503 229 12 5 chr2 185921504 185921615 -64766239 - L1MA9 LINE L1 -24 6267 6150 360 0 0 0 chr2 185921615 185921655 -64766199 + (TG)n Simple_repeat Simple_repeat 1 40 0 503 229 12 5 chr2 185921655 185921676 -64766178 - L1MA9 LINE L1 -141 6150 6131 198 0 0 0 chr2 185921757 185921779 -64766075 + (A)n Simple_repeat Simple_repeat 1 22 0 252 283 87 11 chr2 185923996 185924088 -64763766 - L2 LINE L2 -22 3291 3193 902 185 94 54 chr2 185924163 185924306 -64763548 - L1MC5 LINE L1 -50 7911 7775 1902 142 10 20 chr2 185924306 185924608 -64763246 - AluJb SINE Alu -13 299 1 902 185 94 54 chr2 185924608 185924761 -64763093 - L1MC5 LINE L1 -186 7775 7603 720 253 87 12 chr2 185925099 185925340 -64762514 + L1MC4a LINE L1 5330 5588 -2220 383 264 8 0 chr2 185925347 185925476 -64762378 + CT-rich Low_complexity Low_complexity 1 130 0 1145 143 6 0 chr2 185925529 185925704 -64762150 + AluSg/x SINE Alu 135 310 0 295 232 43 137 chr2 185925819 185926030 -64761824 + L1MC4a LINE L1 5716 5906 -1902 221 120 0 40 chr2 185926321 185926371 -64761483 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 1237 208 58 70 chr2 185926399 185926712 -64761142 + MLT1G LTR MaLR 282 590 0 2287 109 0 0 chr2 185926831 185927133 -64760721 + AluSx SINE Alu 1 302 -10 1937 136 16 19 chr2 185927960 185928268 -64759586 + AluJo SINE Alu 1 307 -5 2179 135 0 0 chr2 185928268 185928565 -64759289 + AluSx SINE Alu 1 297 -15 378 280 38 112 chr2 185928579 185929000 -64758854 + MLT1G3-int LTR MaLR 982 1371 0 1193 206 150 79 chr2 185929000 185929581 -64758273 + MLT1G3 LTR MaLR 1 530 0 335 306 40 24 chr2 185931102 185931226 -64756628 + MIR3 SINE MIR 35 160 -48 432 270 185 6 chr2 185931999 185932177 -64755677 + MIR SINE MIR 41 250 -12 186 209 0 0 chr2 185932184 185932227 -64755627 + (TAA)n Simple_repeat Simple_repeat 3 45 0 494 244 69 0 chr2 185932956 185933087 -64754767 + MER91A DNA MER1_type 55 194 -2 191 216 0 0 chr2 185934647 185934684 -64753170 - L2 LINE L2 0 3272 3236 344 311 89 29 chr2 185934901 185935216 -64752638 - L2 LINE L2 -341 2973 2640 233 211 0 19 chr2 185936366 185936418 -64751436 + L2 LINE L2 3189 3239 -74 1274 99 0 0 chr2 185936473 185936635 -64751219 - AluSq SINE Alu -15 298 137 2171 121 0 0 chr2 185936635 185936940 -64750914 - AluSx SINE Alu -7 305 1 1432 129 10 0 chr2 185937502 185937731 -64750123 + AluJb SINE Alu 79 309 0 410 294 92 94 chr2 185937806 185938275 -64749579 + L2 LINE L2 2805 3272 0 294 268 134 14 chr2 185938284 185938426 -64749428 + MIR SINE MIR 98 256 -6 731 223 84 66 chr2 185939199 185939486 -64748368 + L1MC4 LINE L1 7751 8042 0 1734 183 3 0 chr2 185939488 185939773 -64748081 + AluJo SINE Alu 1 286 -26 338 0 24 0 chr2 185942252 185942294 -64745560 + (TAAAA)n Simple_repeat Simple_repeat 5 47 0 1815 156 3 14 chr2 185942327 185942610 -64745244 + AluJo SINE Alu 3 282 -30 23 0 0 0 chr2 185942616 185942639 -64745215 + AT_rich Low_complexity Low_complexity 1 23 0 607 188 81 31 chr2 185942715 185942875 -64744979 + L1MB8 LINE L1 6011 6178 0 192 329 27 0 chr2 185946925 185946998 -64740856 + L2 LINE L2 3198 3272 0 358 286 48 48 chr2 185947195 185947363 -64740491 - LTR16C LTR ERVL -2 489 322 204 40 0 0 chr2 185948604 185948629 -64739225 + (GGAGAA)n Simple_repeat Simple_repeat 5 29 0 978 188 6 44 chr2 185948776 185948881 -64738973 + MER45A DNA AcHobo 1 98 -1483 2105 132 0 3 chr2 185948881 185949176 -64738678 - AluSx SINE Alu -15 297 4 978 188 6 44 chr2 185949176 185949251 -64738603 + MER45A DNA AcHobo 98 174 -4 261 83 0 0 chr2 185950378 185950414 -64737440 + (TA)n Simple_repeat Simple_repeat 2 37 0 381 329 40 101 chr2 185951918 185952338 -64735516 - L2 LINE L2 -19 3253 2864 1187 230 9 0 chr2 185952338 185952560 -64735294 - MER58A DNA MER1_type 0 224 1 381 329 40 101 chr2 185952560 185952613 -64735241 - L2 LINE L2 -408 2864 2809 2279 98 3 22 chr2 185952803 185953121 -64734733 - AluSx SINE Alu 0 312 1 219 292 112 34 chr2 185953536 185953625 -64734229 - L2 LINE L2 -30 3242 3147 897 201 18 0 chr2 185953625 185953789 -64734065 - MER58B DNA MER1_type -1 340 174 2207 147 8 25 chr2 185954224 185954585 -64733269 + THE1A LTR MaLR 1 355 0 559 261 126 4 chr2 185954632 185954870 -64732984 - LTR16C LTR ERVL 0 491 225 1815 191 90 8 chr2 185956520 185956886 -64730968 + MSTD LTR MaLR 1 396 0 282 116 0 0 chr2 185957187 185957230 -64730624 + (ATG)n Simple_repeat Simple_repeat 1 43 0 249 246 51 51 chr2 185957254 185957372 -64730482 - MIR SINE MIR -50 212 95 799 232 45 22 chr2 185959164 185959388 -64728466 - MIR SINE MIR -29 233 5 362 267 23 12 chr2 185959517 185959603 -64728251 - L2 LINE L2 -2 3270 3184 1656 149 4 8 chr2 185960218 185960473 -64727381 - AluJb SINE Alu -23 289 36 1238 307 38 26 chr2 185960677 185961287 -64726567 - L1MC4a LINE L1 -1875 5933 5317 3358 58 2 40 chr2 185962484 185962953 -64724901 - L1PA7 LINE L1 -2 6152 5702 16558 37 2 2 chr2 185962970 185965775 -64722079 + L1PA5 LINE L1 3341 6149 -5 3296 73 1 0 chr2 185965775 185966406 -64721448 - L1PA7 LINE L1 -459 5695 5064 2091 131 118 21 chr2 185967163 185967552 -64720302 - MSTA LTR MaLR -1 427 1 499 308 45 27 chr2 185968041 185968262 -64719592 + MIR SINE MIR 28 252 -10 229 272 49 0 chr2 185968304 185968385 -64719469 - MARNA DNA Mariner -105 481 397 306 283 107 17 chr2 185968447 185968587 -64719267 - MIR SINE MIR -65 143 22 222 37 0 0 chr2 185969697 185969724 -64718130 + (AATAG)n Simple_repeat Simple_repeat 3 29 0 261 258 16 0 chr2 185969777 185969839 -64718015 - MER112 DNA MER1_type -190 70 8 329 169 14 28 chr2 185970312 185970383 -64717471 - MER116 DNA Mariner -2 78 9 260 304 54 0 chr2 185970800 185970892 -64716962 - MIR SINE MIR -50 212 116 435 88 0 0 chr2 185971027 185971084 -64716770 + AluJ/FLAM SINE Alu 35 91 -221 1241 117 38 9 chr2 185971084 185971297 -64716557 + MSTB LTR MaLR 208 426 0 1997 115 0 59 chr2 185972754 185973075 -64714779 + AluSq SINE Alu 1 302 -11 604 323 64 33 chr2 185973611 185974066 -64713788 - L2 LINE L2 -1303 2011 1543 294 206 0 0 chr2 185974130 185974198 -64713656 + (TA)n Simple_repeat Simple_repeat 1 68 0 191 336 54 48 chr2 185974712 185975007 -64712847 - L2 LINE L2 -1918 1396 1100 2045 153 0 3 chr2 185975097 185975405 -64712449 - AluSx SINE Alu -5 307 1 251 224 26 26 chr2 185975444 185975520 -64712334 - L2 LINE L2 -2253 1061 986 230 341 0 12 chr2 185977216 185977301 -64710553 - MIR SINE MIR -108 154 71 189 327 19 0 chr2 185977535 185977587 -64710267 + L2 LINE L2 3252 3304 -9 409 262 24 8 chr2 185981320 185981446 -64706408 + L2 LINE L2 2673 2800 -514 1834 140 17 10 chr2 185982083 185982415 -64705439 - AluJb SINE Alu 0 344 11 395 176 8 118 chr2 185982753 185982824 -64705030 + MIR SINE MIR 45 99 -163 252 0 0 0 chr2 185982824 185982852 -64705002 + (TG)n Simple_repeat Simple_repeat 1 28 0 395 176 8 118 chr2 185982852 185982899 -64704955 + MIR SINE MIR 99 150 -112 2730 256 56 46 chr2 185982899 185984862 -64702992 + L1ME LINE L1 2 1994 -4267 549 304 175 7 chr2 185985037 185985317 -64702537 + LTR16B LTR ERVL 134 460 -4 5036 218 88 55 chr2 185985321 185987488 -64700366 + L1ME LINE L1 1991 4182 -1898 415 250 26 17 chr2 185987490 185987606 -64700248 + MIR SINE MIR 136 252 -10 3407 96 0 18 chr2 185988063 185988553 -64699301 - L1PA15 LINE L1 -13 6152 5672 2449 235 9 0 chr2 185988566 185989213 -64698641 + L1P LINE L1 2627 3279 -2867 279 289 9 0 chr2 185989244 185989358 -64698496 + L1ME4a LINE L1 5935 6049 -72 2389 78 0 3 chr2 185989396 185989691 -64698163 - AluY SINE Alu -17 294 1 348 284 65 52 chr2 185990162 185990317 -64697537 - MIR3 SINE MIR -9 199 43 321 258 267 0 chr2 185992983 185993103 -64694751 - L2 LINE L2 0 3272 3121 263 288 0 41 chr2 185993336 185993409 -64694445 + L2 LINE L2 3241 3310 -3 201 206 41 68 chr2 185993454 185993527 -64694327 - MIR3 SINE MIR -15 193 123 1349 236 39 17 chr2 185993547 185993953 -64693901 + L1MB8 LINE L1 5764 6178 0 865 167 27 50 chr2 185994133 185994355 -64693499 + L1MB5 LINE L1 5952 6168 -6 180 278 0 19 chr2 185995042 185995096 -64692758 - MIR SINE MIR -158 104 52 608 197 75 58 chr2 185996290 185996478 -64691376 - MER46C DNA MER2_type -141 197 7 1375 221 158 25 chr2 185997132 185997657 -64690197 + MLT1G1 LTR MaLR 1 595 0 309 358 8 22 chr2 185997839 185997973 -64689881 + L2 LINE L2 3139 3270 -2 402 0 0 49 chr2 185998174 185998235 -64689619 + (TG)n Simple_repeat Simple_repeat 2 59 0 2139 160 50 19 chr2 185998535 185998954 -64688900 - MSTB1 LTR MaLR 0 432 1 236 256 112 40 chr2 185999102 185999227 -64688627 + MIR3 SINE MIR 43 176 -32 3780 108 2 23 chr2 186000283 186000849 -64687005 + MER41A LTR ERV1 1 554 0 1483 191 42 0 chr2 186002163 186002425 -64685429 + AluJo SINE Alu 1 273 -39 203 149 0 21 chr2 186002487 186002534 -64685320 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 718 332 18 22 chr2 186002589 186002818 -64685036 + MIR SINE MIR 14 241 -21 275 263 125 0 chr2 186004470 186004550 -64683304 - MIR SINE MIR -110 152 63 455 152 120 0 chr2 186005309 186005401 -64682453 - MER46A DNA MER2_type -41 195 93 261 310 0 0 chr2 186006556 186006643 -64681211 + L1ME LINE L1 5508 5594 -527 576 155 101 101 chr2 186006702 186006798 -64681056 + MER2 DNA MER2_type 177 275 -70 2162 98 41 10 chr2 186006798 186007093 -64680761 - AluSx SINE Alu -8 304 1 576 155 101 101 chr2 186007093 186007164 -64680690 + MER2 DNA MER2_type 274 344 -1 2309 169 98 2 chr2 186007165 186007667 -64680187 + MER45B DNA AcHobo 491 1040 0 2417 96 0 0 chr2 186008458 186008760 -64679094 + AluSq SINE Alu 1 302 -11 317 264 33 58 chr2 186009082 186009203 -64678651 + HAL1 LINE L1 2376 2493 -14 30 27 0 0 chr2 186009209 186009246 -64678608 + AT_rich Low_complexity Low_complexity 1 37 0 1010 189 0 6 chr2 186009248 186009428 -64678426 + AluJb SINE Alu 127 305 -7 33 0 0 0 chr2 186010214 186010247 -64677607 + AT_rich Low_complexity Low_complexity 1 33 0 209 293 12 37 chr2 186010403 186010485 -64677369 + MIR SINE MIR 183 262 0 334 310 124 7 chr2 186011872 186012017 -64675837 + L2 LINE L2 3150 3311 -2 460 294 37 21 chr2 186012270 186012457 -64675397 - MIR SINE MIR -65 197 8 1798 142 27 20 chr2 186013046 186013342 -64674512 - AluJb SINE Alu -14 298 1 23 54 0 0 chr2 186014227 186014264 -64673590 + AT_rich Low_complexity Low_complexity 1 37 0 2577 124 8 0 chr2 186014591 186014953 -64672901 + MER47A DNA MER2_type 2 366 0 631 336 14 9 chr2 186015121 186015332 -64672522 + Charlie1 DNA MER1_type 2 213 -2548 553 305 29 23 chr2 186015670 186015844 -64672010 - MER5B DNA MER1_type -1 177 3 216 0 0 0 chr2 186018265 186018289 -64669565 + (T)n Simple_repeat Simple_repeat 1 24 0 2830 13 0 6 chr2 186020262 186020575 -64667279 + AluYa5 SINE Alu 1 311 0 21 36 0 0 chr2 186020977 186021005 -64666849 + AT_rich Low_complexity Low_complexity 1 28 0 2824 77 5 29 chr2 186021682 186022060 -64665794 - L1PB1 LINE L1 -1 6150 5782 188 94 75 0 chr2 186022070 186022123 -64665731 + (TA)n Simple_repeat Simple_repeat 1 57 0 1892 93 8 0 chr2 186022138 186022419 -64665435 - L1PB1 LINE L1 -360 5791 5502 254 275 0 0 chr2 186022822 186022891 -64664963 + (TA)n Simple_repeat Simple_repeat 1 69 0 780 269 80 61 chr2 186023522 186024158 -64663696 + L1MC5 LINE L1 7269 7916 -45 1785 225 47 13 chr2 186025807 186026255 -64661599 - L1ME2 LINE L1 0 6164 5702 274 277 53 11 chr2 186026400 186026494 -64661360 - MIR SINE MIR -128 134 37 883 250 156 34 chr2 186028828 186029148 -64658706 + LTR16C LTR ERVL 130 488 -3 254 277 0 0 chr2 186029664 186029729 -64658125 + MIR SINE MIR 185 249 -13 403 241 36 18 chr2 186029766 186029878 -64657976 - MIR SINE MIR -108 154 41 1458 188 11 17 chr2 186030209 186030496 -64657358 + AluJo SINE Alu 16 300 -12 499 249 100 76 chr2 186031194 186031443 -64656411 + MIR SINE MIR 8 262 0 536 141 0 0 chr2 186032246 186032324 -64655530 - FAM SINE Alu -13 172 95 270 233 256 0 chr2 186033505 186033595 -64654259 - MIR SINE MIR -29 233 121 405 0 0 0 chr2 186033966 186034011 -64653843 + (CA)n Simple_repeat Simple_repeat 2 46 0 21 0 0 0 chr2 186035236 186035257 -64652597 + AT_rich Low_complexity Low_complexity 1 21 0 10637 84 9 5 chr2 186035932 186037427 -64650427 + THE1B-int LTR MaLR 1 1580 0 2430 148 8 14 chr2 186037429 186037793 -64650061 + THE1B LTR MaLR 3 364 0 182 327 0 0 chr2 186038348 186038400 -64649454 + MIR SINE MIR 61 112 -150 283 246 62 79 chr2 186038797 186038940 -64648914 + MIR SINE MIR 7 144 -80 1801 157 65 52 chr2 186039118 186039500 -64648354 + MLT2C1 LTR ERVL 5 391 -6 260 282 8 48 chr2 186040218 186040342 -64647512 + CT-rich Low_complexity Low_complexity 1 119 0 809 275 9 18 chr2 186040637 186040859 -64646995 + MIR SINE MIR 13 232 -30 240 218 0 0 chr2 186041720 186041775 -64646079 + T-rich Low_complexity Low_complexity 1 55 0 190 424 45 8 chr2 186042134 186042266 -64645588 + L2 LINE L2 3136 3272 0 773 202 0 0 chr2 186043345 186043464 -64644390 + FRAM SINE Alu 5 123 -53 1941 100 0 4 chr2 186043473 186043723 -64644131 - AluSc SINE Alu -60 249 1 1142 273 107 50 chr2 186043795 186044373 -64643481 + MLT1L LTR MaLR 1 611 -4 316 239 192 78 chr2 186045489 186045649 -64642205 - Charlie8 DNA MER1_type -57 284 144 1799 107 122 4 chr2 186045649 186045911 -64641943 - AluSq SINE Alu 0 313 21 1691 156 34 0 chr2 186045911 186046173 -64641681 - AluJb SINE Alu -40 272 1 316 239 192 78 chr2 186046173 186046266 -64641588 - Charlie8 DNA MER1_type -196 145 1 1991 208 37 15 chr2 186046652 186047109 -64640745 + MLT1C LTR MaLR 1 467 0 1175 190 92 83 chr2 186048812 186049160 -64638694 + MLT1A1 LTR MaLR 15 365 0 316 316 72 26 chr2 186049347 186049499 -64638355 - L2 LINE L2 -569 2745 2587 4995 168 25 5 chr2 186049698 186050572 -64637282 + L1MB1 LINE L1 5276 6167 -1 415 250 11 0 chr2 186050661 186050749 -64637105 + MLT1E LTR MaLR 72 160 -433 * 1984 189 78 73 chr2 186050719 186051107 -64636747 + MLT1E1 LTR MaLR 103 497 -157 1742 153 7 31 chr2 186051107 186051422 -64636432 - AluJo SINE Alu 0 308 1 1984 189 78 73 chr2 186051422 186051581 -64636273 + MLT1E1 LTR MaLR 497 654 0 2014 137 30 57 chr2 186051768 186052106 -64635748 + MLT1A1 LTR MaLR 1 331 -34 1823 173 0 3 chr2 186052106 186052427 -64635427 + AluJb SINE Alu 1 320 0 2014 137 30 57 chr2 186052427 186052453 -64635401 + MLT1A1 LTR MaLR 331 356 -9 2164 128 0 7 chr2 186052795 186053099 -64634755 - AluSx SINE Alu -10 302 1 1252 209 0 46 chr2 186053122 186053405 -64634449 - AluJo SINE Alu -13 299 30 292 345 86 0 chr2 186053561 186053677 -64634177 - L2 LINE L2 0 3272 3147 2321 95 3 0 chr2 186054902 186055198 -64632656 + AluSp SINE Alu 1 297 -16 244 41 0 184 chr2 186055475 186055496 -64632358 + U3 snRNA snRNA 1 10 -207 2297 85 14 0 chr2 186055496 186055790 -64632064 - AluY SINE Alu -13 298 1 244 41 0 184 chr2 186055790 186055817 -64632037 + U3 snRNA snRNA 10 40 -177 410 209 8 0 chr2 186056215 186056344 -64631510 + (CA)n Simple_repeat Simple_repeat 1 130 0 1066 211 66 83 chr2 186058059 186058409 -64629445 - MER2 DNA MER2_type 0 344 1 813 157 0 0 chr2 186058462 186058583 -64629271 + AluJo/FLAM SINE Alu 6 126 -186 567 141 0 0 chr2 186058586 186058664 -64629190 - AluJ/FLAM SINE Alu -233 79 2 997 130 0 0 chr2 186058712 186058850 -64629004 + MER72 LTR ERV1 585 722 0 299 282 120 0 chr2 186059133 186059250 -64628604 + L1MC/D LINE L1 5566 5696 -2112 2764 135 44 64 chr2 186059373 186059937 -64627917 + MER34B LTR ERV1 11 563 -2 1251 275 58 37 chr2 186060173 186060942 -64626912 + L2 LINE L2 2528 3309 -4 650 304 30 66 chr2 186062026 186062466 -64625388 + L1MEc LINE L1 2 425 -5971 591 244 80 11 chr2 186062567 186062743 -64625111 + L2 LINE L2 3126 3313 0 1080 247 54 59 chr2 186062885 186063549 -64624305 + L1MEc LINE L1 661 1321 -5075 618 241 75 0 chr2 186063615 186063748 -64624106 + MLT1H1 LTR MaLR 1 143 -412 335 307 36 21 chr2 186063754 186063894 -64623960 + MIR3 SINE MIR 64 205 -3 187 346 57 38 chr2 186065451 186065610 -64622244 - L2 LINE L2 -240 3032 2871 610 193 0 9 chr2 186065965 186066079 -64621775 - MER94 DNA DNA -21 113 1 252 0 0 0 chr2 186066238 186066266 -64621588 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 35 45 0 15 chr2 186067365 186067383 -64620471 + AT_rich Low_complexity Low_complexity 1 18 -48 2301 103 0 7 chr2 186067383 186067693 -64620161 + AluSx SINE Alu 1 308 -4 35 45 0 15 chr2 186067693 186067741 -64620113 + AT_rich Low_complexity Low_complexity 18 66 0 1879 150 3 7 chr2 186067786 186068072 -64619782 - AluJb SINE Alu -27 285 1 23 42 0 21 chr2 186068256 186068283 -64619571 + AT_rich Low_complexity Low_complexity 1 28 -19 695 224 0 15 chr2 186068283 186068417 -64619437 + FLAM_A SINE Alu 1 132 -1 23 42 0 21 chr2 186068417 186068437 -64619417 + AT_rich Low_complexity Low_complexity 28 47 0 1254 166 114 17 chr2 186068619 186068901 -64618953 + MLT1A1 LTR MaLR 1 349 -47 29 28 0 0 chr2 186068909 186068945 -64618909 + AT_rich Low_complexity Low_complexity 1 36 0 333 162 73 0 chr2 186068945 186069013 -64618841 + MLT1A1 LTR MaLR 293 365 0 263 351 97 8 chr2 186069328 186069462 -64618392 - L2 LINE L2 0 3313 3168 591 259 109 5 chr2 186069520 186069740 -64618114 - MIR SINE MIR -12 250 8 868 148 42 48 chr2 186070127 186070316 -64617538 + MER53 DNA DNA 1 188 -1 1347 205 85 15 chr2 186070358 186070875 -64616979 + LTR48 LTR ERV1 1 787 0 210 71 0 0 chr2 186071493 186071521 -64616333 + (T)n Simple_repeat Simple_repeat 1 28 0 1763 101 116 11 chr2 186071915 186072191 -64615663 + AluSg SINE Alu 1 305 -5 2489 77 0 0 chr2 186072548 186072848 -64615006 + AluSp SINE Alu 1 300 -13 977 223 84 72 chr2 186073129 186073475 -64614379 + L1ME1 LINE L1 5761 6090 -88 1883 138 39 0 chr2 186073475 186073757 -64614097 - AluSx SINE Alu -19 293 1 977 223 84 72 chr2 186073757 186073842 -64614012 + L1ME1 LINE L1 6090 6172 -6 2005 195 54 18 chr2 186074664 186075110 -64612744 + MLT1C LTR MaLR 6 467 0 189 283 11 76 chr2 186075636 186075728 -64612126 - L2 LINE L2 -4 3268 3183 1765 174 3 10 chr2 186075753 186076058 -64611796 - AluJo SINE Alu -9 303 1 1893 110 29 4 chr2 186077884 186078185 -64609669 - AluSg SINE Alu 0 308 1 2213 158 58 45 chr2 186078329 186078585 -64609269 - L1MDa LINE L1 -4451 2089 1838 2166 81 6 72 chr2 186078585 186078920 -64608934 + AluSp SINE Alu 1 313 0 2213 158 58 45 chr2 186078920 186079293 -64608561 - L1MDa LINE L1 -4702 1838 1353 2597 54 0 0 chr2 186079293 186079590 -64608264 - AluY SINE Alu -14 297 1 2213 158 58 45 chr2 186079590 186079774 -64608080 - L1MDa LINE L1 -5187 1353 1173 1993 243 35 4 chr2 186079788 186080249 -64607605 - L1MDa LINE L1 -6063 477 3 3192 254 90 22 chr2 186080962 186082200 -64605654 + L2 LINE L2 1999 3313 0 1268 248 37 18 chr2 186084001 186084328 -64603526 + L1MD2 LINE L1 6015 6347 -12 2277 88 3 7 chr2 186084331 186084626 -64603228 + AluSq SINE Alu 1 294 -19 2390 72 0 3 chr2 186084974 186085266 -64602588 - AluY SINE Alu -20 291 1 401 264 25 50 chr2 186085379 186085500 -64602354 + MIR SINE MIR 34 151 -111 258 281 116 45 chr2 186085512 186085804 -64602050 + L1ME LINE L1 5561 5873 -248 301 74 19 19 chr2 186086097 186086151 -64601703 + (TG)n Simple_repeat Simple_repeat 2 55 0 597 250 45 101 chr2 186088351 186088687 -64599167 + L2 LINE L2 2997 3313 0 422 233 62 23 chr2 186088694 186088823 -64599031 + L2 LINE L2 3180 3313 0 5149 165 14 58 chr2 186089053 186089435 -64598419 + L1MA8 LINE L1 5166 5563 -603 2301 130 30 43 chr2 186089435 186089804 -64598050 + THE1B LTR MaLR 1 364 0 12173 102 6 6 chr2 186089804 186091385 -64596469 + THE1B-int LTR MaLR 1 1580 0 2287 124 39 36 chr2 186091385 186091748 -64596106 + THE1B LTR MaLR 1 364 0 5149 165 14 58 chr2 186091748 186092264 -64595590 + L1MA8 LINE L1 5561 5876 -290 1815 166 14 0 chr2 186092264 186092553 -64595301 + AluJo SINE Alu 1 293 -19 5149 165 14 58 chr2 186092553 186092829 -64595025 + L1MA8 LINE L1 5876 6163 -3 2418 90 0 0 chr2 186093114 186093415 -64594439 + AluSx SINE Alu 1 301 -11 2449 255 100 22 chr2 186094316 186095484 -64592370 + L1M4 LINE L1 2990 4296 -1850 212 317 100 0 chr2 186095498 186095558 -64592296 - MIR SINE MIR -194 68 3 414 288 72 0 chr2 186095586 186095739 -64592115 - MIR SINE MIR -62 200 37 383 256 132 57 chr2 186096022 186096393 -64591461 - MLT1J LTR MaLR -3 508 110 1597 194 129 65 chr2 186097454 186098054 -64589800 + L1MC5 LINE L1 7223 7870 -91 1785 176 7 3 chr2 186098054 186098360 -64589494 + AluJo SINE Alu 1 307 -5 1597 194 129 65 chr2 186098360 186098410 -64589444 + L1MC5 LINE L1 7870 7915 -46 193 288 34 17 chr2 186098673 186098732 -64589122 - L2 LINE L2 -27 3245 3186 1897 185 25 0 chr2 186099852 186100177 -64587677 - MER58B DNA MER1_type -8 333 1 2259 114 3 0 chr2 186100356 186100663 -64587191 + AluSx SINE Alu 1 308 -4 213 152 0 0 chr2 186101703 186101736 -64586118 + L2 LINE L2 3239 3271 -42 21 0 0 0 chr2 186101912 186101933 -64585921 + AT_rich Low_complexity Low_complexity 1 21 0 193 284 227 11 chr2 186102154 186102242 -64585612 - MIR3 SINE MIR -51 157 51 395 252 29 19 chr2 186105644 186105747 -64582107 - MIR SINE MIR 0 262 159 1176 230 50 7 chr2 186106582 186106860 -64580994 + L1MB8 LINE L1 5885 6174 -4 377 234 36 9 chr2 186106920 186107031 -64580823 - L1ME4a LINE L1 -47 6074 5961 800 153 0 29 chr2 186107046 186107183 -64580671 + FLAM_C SINE Alu 1 133 -10 287 259 47 0 chr2 186107209 186107294 -64580560 + L1MC4 LINE L1 6616 6704 -1338 528 318 126 5 chr2 186107647 186107870 -64579984 + MIR SINE MIR 13 262 0 1795 186 129 54 chr2 186109113 186109592 -64578262 - MLT2B2 LTR ERVL 0 515 1 2660 117 15 68 chr2 186110220 186110557 -64577297 + LTR56 LTR ERV1 1 308 -137 1970 151 0 3 chr2 186110557 186110861 -64576993 + AluJb SINE Alu 9 311 -1 2660 117 15 68 chr2 186110861 186110993 -64576861 + LTR56 LTR ERV1 308 445 0 858 279 35 18 chr2 186112840 186113123 -64574731 - L2 LINE L2 -16 3297 3010 1676 222 58 20 chr2 186113504 186113954 -64573900 + MLT1C LTR MaLR 1 467 0 591 254 85 18 chr2 186114026 186114287 -64573567 - L2 LINE L2 -271 3042 2771 2476 243 122 9 chr2 186114300 186115054 -64572800 - L1ME3 LINE L1 -8 6154 5316 831 244 52 31 chr2 186115088 186115317 -64572537 - MLT1F1 LTR MaLR 0 567 334 288 242 143 0 chr2 186115655 186115746 -64572108 + L1ME LINE L1 5614 5717 -404 1154 242 158 30 chr2 186115906 186116398 -64571456 - L1MC4 LINE L1 0 8042 7488 553 281 39 0 chr2 186117191 186117344 -64570510 - MER117 DNA MER1_type -38 159 1 1038 241 43 87 chr2 186117523 186117983 -64569871 - MLT1J1 LTR MaLR -3 443 4 216 374 9 9 chr2 186118118 186118225 -64569629 + L3b LINE CR1 1364 1470 -113 2129 125 10 0 chr2 186118227 186118522 -64569332 + AluSx SINE Alu 1 298 -14 1697 259 68 23 chr2 186118533 186119088 -64568766 + L1MCc LINE L1 17 596 -5827 225 0 0 0 chr2 186119122 186119147 -64568707 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 396 248 20 67 chr2 186119159 186119308 -64568546 + L1MCc LINE L1 693 834 -5589 331 267 162 0 chr2 186119341 186119446 -64568408 + L1MCc LINE L1 946 1067 -5356 2122 135 0 0 chr2 186119450 186119747 -64568107 + AluSx SINE Alu 1 297 -15 189 0 0 0 chr2 186119747 186119768 -64568086 + (GA)n Simple_repeat Simple_repeat 2 22 0 1651 217 49 5 chr2 186119786 186120196 -64567658 + L1MCc LINE L1 1162 1757 -4887 2846 229 53 7 chr2 186120322 186121037 -64566817 + L1ME1 LINE L1 5419 6166 0 361 241 12 12 chr2 186121874 186121957 -64565897 - MER20B DNA MER1_type -2 781 699 * 418 279 12 56 chr2 186121952 186122113 -64565741 - MER20B DNA MER1_type -627 156 3 818 79 88 0 chr2 186122191 186122305 -64565549 + AluSg/x SINE Alu 169 292 -18 1059 201 89 5 chr2 186122404 186122618 -64565236 - MLT1F1 LTR MaLR -2 565 334 765 208 134 10 chr2 186122650 186122852 -64565002 - MLT1F1 LTR MaLR -315 227 1 22 70 0 0 chr2 186123175 186123218 -64564636 + AT_rich Low_complexity Low_complexity 1 43 0 2122 103 41 0 chr2 186123240 186123531 -64564323 + AluSx SINE Alu 1 303 -9 786 276 91 11 chr2 186124416 186124680 -64563174 + Charlie2 DNA MER1_type 4 288 -2494 1032 286 87 5 chr2 186124721 186125112 -64562742 + Charlie2b DNA MER1_type 846 1268 -1514 2245 213 75 17 chr2 186125114 186125763 -64562091 + Charlie2b DNA MER1_type 2083 2769 -13 8232 159 126 48 chr2 186125950 186127579 -64560275 + MER52A LTR ERV1 1 1755 0 230 227 30 0 chr2 186127811 186127877 -64559977 + (TA)n Simple_repeat Simple_repeat 1 68 0 1967 161 0 3 chr2 186127972 186128282 -64559572 - AluJb SINE Alu -3 309 1 5616 177 36 24 chr2 186129227 186130297 -64557557 - Tigger6a DNA MER2_type 0 1083 1 2000 149 33 36 chr2 186130892 186131254 -64556600 + MER46B DNA MER2_type 1 236 0 405 301 20 10 chr2 186131256 186131452 -64556402 - HAL1 LINE L1 -129 2378 2181 1642 146 91 0 chr2 186131570 186131844 -64556010 - AluJb SINE Alu -13 299 1 4724 207 82 22 chr2 186132110 186133136 -64554718 + L1MDa LINE L1 17 1121 -5419 1865 155 3 16 chr2 186133136 186133440 -64554414 + AluJb SINE Alu 1 300 -12 4724 207 82 22 chr2 186133440 186133563 -64554291 + L1MDa LINE L1 1121 1235 -5305 1634 168 56 61 chr2 186133559 186133953 -64553901 + L1MD1 LINE L1 5851 6242 0 * 201 133 67 0 chr2 186135778 186135791 -64552063 + GA-rich Low_complexity Low_complexity 3 14 -36 2292 95 6 16 chr2 186135791 186136106 -64551748 + AluSx SINE Alu 1 312 0 201 133 67 0 chr2 186136106 186136137 -64551717 + GA-rich Low_complexity Low_complexity 14 50 0 1617 231 77 55 chr2 186136460 186136953 -64550901 - MLT1D LTR MaLR -1 504 1 22 0 0 0 chr2 186137238 186137260 -64550594 + AT_rich Low_complexity Low_complexity 1 22 0 2219 108 3 3 chr2 186137373 186137670 -64550184 - AluSx SINE Alu -15 297 1 337 272 32 0 chr2 186137855 186137980 -64549874 + L1MDa LINE L1 1930 2058 -4663 552 280 19 0 chr2 186138031 186138188 -64549666 + L1MDa LINE L1 2754 2913 -3627 222 62 0 0 chr2 186138201 186138233 -64549621 + (A)n Simple_repeat Simple_repeat 1 32 0 352 257 40 57 chr2 186138604 186138779 -64549075 + HAL1 LINE L1 2336 2507 0 9460 78 81 2 chr2 186138822 186140104 -64547750 + SVA Other Other 1 1383 -3 180 111 0 0 chr2 186140111 186140138 -64547716 + (A)n Simple_repeat Simple_repeat 1 27 0 237 321 0 0 chr2 186140187 186140240 -64547614 - L2 LINE L2 -15 3298 3246 772 205 11 54 chr2 186140943 186141128 -64546726 - MER5B DNA MER1_type -1 177 1 823 222 35 0 chr2 186141135 186141306 -64546548 + MER5A DNA MER1_type 1 177 -12 2318 201 27 73 chr2 186143483 186143665 -64544189 - MLT1E LTR MaLR -29 564 375 2308 117 3 0 chr2 186143665 186143974 -64543880 - AluSq SINE Alu -3 310 1 2318 201 27 73 chr2 186143974 186144382 -64543472 - MLT1E LTR MaLR -218 375 1 216 340 88 20 chr2 186144382 186144529 -64543325 + MIR SINE MIR 94 250 -12 3663 143 29 15 chr2 186144594 186144728 -64543126 - MER6A DNA MER2_type -281 584 453 2147 129 0 3 chr2 186144728 186145030 -64542824 - AluSx SINE Alu -11 301 1 3663 143 29 15 chr2 186145030 186145482 -64542372 - MER6A DNA MER2_type -412 453 -9 1467 204 69 39 chr2 186145786 186146192 -64541662 - LTR52 LTR ERVL -3 418 1 850 232 55 14 chr2 186146328 186146548 -64541306 - MIR SINE MIR -33 229 1 1951 179 58 29 chr2 186146918 186147394 -64540460 + LTR45B LTR ERV1 3 525 0 4855 120 17 43 chr2 186147886 186148462 -64539392 + L1MC1 LINE L1 5585 6138 -195 680 154 0 0 chr2 186148462 186148566 -64539288 - U13 snRNA snRNA 0 104 1 4855 120 17 43 chr2 186148566 186148758 -64539096 + L1MC1 LINE L1 6138 6333 0 258 231 0 0 chr2 186148797 186148849 -64539005 + LTR30 LTR ERV1 1 52 -670 7728 64 0 0 chr2 186148857 186150560 -64537294 - L1PA6 LINE L1 -1 6153 4446 1559 110 21 8 chr2 186150560 186150796 -64537058 + LTR12 LTR ERV1 39 277 -437 396 232 10 0 chr2 186150796 186150895 -64536959 + LTR30 LTR ERV1 544 643 -79 757 125 0 0 chr2 186150896 186151000 -64536854 + LTR12 LTR ERV1 481 584 -130 711 247 60 16 chr2 186151011 186151334 -64536520 + LTR16B LTR ERVL 36 464 0 450 312 29 6 chr2 186151336 186151509 -64536345 + HERV16 LTR ERVL 3 179 -4817 401 219 58 44 chr2 186151504 186151641 -64536213 + HERV16 LTR ERVL 4152 4290 -706 * 966 336 34 38 chr2 186151736 186152376 -64535478 + HERV16 LTR ERVL 4707 5344 -310 283 261 60 49 chr2 186152499 186152684 -64535170 + L1MC/D LINE L1 5259 5445 -726 239 140 20 0 chr2 186152998 186153048 -64534806 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 751 132 0 0 chr2 186153056 186153162 -64534692 - LTR12 LTR ERV1 -130 584 479 298 250 0 0 chr2 186153194 186153266 -64534588 - LTR30 LTR ERV1 -98 624 553 1588 75 11 193 chr2 186153267 186153615 -64534239 - LTR12 LTR ERV1 -429 285 1 190 304 18 0 chr2 186153829 186153885 -64533969 + L2 LINE L2 3204 3260 -12 289 242 31 22 chr2 186154247 186154367 -64533487 - MIR SINE MIR -53 209 88 523 342 139 10 chr2 186154446 186154651 -64533203 - L2 LINE L2 -493 2821 2644 1895 130 69 77 chr2 186154651 186155029 -64532825 - THE1C LTR MaLR 0 375 1 523 342 139 10 chr2 186155029 186155227 -64532627 - L2 LINE L2 -670 2644 2366 1907 156 0 3 chr2 186155410 186155726 -64532128 - AluJb SINE Alu 0 315 1 1025 299 34 3 chr2 186156011 186156335 -64531519 + L2 LINE L2 2015 2348 -966 1134 127 0 0 chr2 186156337 186156502 -64531352 + MSTA LTR MaLR 215 379 -49 2406 67 7 3 chr2 186156503 186156800 -64531054 - AluY SINE Alu -13 298 1 463 300 177 29 chr2 186156823 186157100 -64530754 + L2 LINE L2 2341 2658 -656 342 294 34 27 chr2 186157102 186157248 -64530606 - MLT1J2 LTR MaLR 0 450 304 279 272 118 15 chr2 186157280 186157416 -64530438 - MLT1J LTR MaLR -361 150 1 1186 247 97 74 chr2 186157416 186157806 -64530048 + L2 LINE L2 2657 3065 -248 1920 133 14 3 chr2 186157806 186158091 -64529763 + AluSx SINE Alu 1 288 -24 1186 247 97 74 chr2 186158091 186158346 -64529508 + L2 LINE L2 3065 3313 0 1767 159 26 19 chr2 186159198 186159322 -64528532 + AluJo SINE Alu 1 123 -189 207 0 0 0 chr2 186159322 186159345 -64528509 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1767 159 26 19 chr2 186159345 186159528 -64528326 + AluJo SINE Alu 123 310 -2 363 340 84 37 chr2 186159538 186159753 -64528101 - L2 LINE L2 0 3272 3048 239 274 27 0 chr2 186160061 186160134 -64527720 + CT-rich Low_complexity Low_complexity 1 75 0 180 0 0 0 chr2 186160396 186160416 -64527438 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1425 216 18 21 chr2 186160418 186160701 -64527153 - AluJo SINE Alu -30 282 1 220 228 18 18 chr2 186161079 186161136 -64526718 - L2 LINE L2 -1 3312 3256 449 261 54 27 chr2 186161336 186161520 -64526334 - HAL1 LINE L1 -1 2506 2318 351 278 41 0 chr2 186161524 186161621 -64526233 - MER94 DNA DNA -2 132 32 2397 77 0 3 chr2 186161679 186161978 -64525876 - AluSx SINE Alu -14 298 1 992 235 71 56 chr2 186161980 186162375 -64525479 - HAL1 LINE L1 -294 2213 1813 383 265 212 12 chr2 186162370 186162540 -64525314 + HAL1 LINE L1 1549 1752 -755 * 15305 119 20 12 chr2 186162658 186164950 -64522904 - Tigger1 DNA MER2_type -1 2417 109 4484 142 10 11 chr2 186166234 186166946 -64520908 + MER50 LTR ERV1 1 711 -23 761 171 0 0 chr2 186167248 186167365 -64520489 - Tigger1 DNA MER2_type -2301 117 1 24 77 0 0 chr2 186168462 186168514 -64519340 + AT_rich Low_complexity Low_complexity 1 52 0 25 31 0 0 chr2 186169084 186169116 -64518738 + AT_rich Low_complexity Low_complexity 1 32 0 841 222 0 0 chr2 186169645 186169798 -64518056 + AluJb SINE Alu 134 286 -26 3458 168 38 20 chr2 186169824 186170518 -64517336 + L1MA8 LINE L1 5115 5827 -464 2541 30 41 0 chr2 186170518 186170813 -64517041 + AluYa5 SINE Alu 1 307 -4 3458 168 38 20 chr2 186170813 186170910 -64516944 + L1MA8 LINE L1 5827 5921 -370 384 22 0 0 chr2 186170913 186170958 -64516896 + (TC)n Simple_repeat Simple_repeat 2 46 0 288 140 0 0 chr2 186170958 186171008 -64516846 + L1MC4 LINE L1 6654 6703 -1339 432 162 29 0 chr2 186171021 186171126 -64516728 + (TA)n Simple_repeat Simple_repeat 1 108 0 183 129 0 0 chr2 186171571 186171602 -64516252 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 251 250 28 65 chr2 186171912 186172020 -64515834 + MIR SINE MIR 3 106 -156 2023 206 69 13 chr2 186172253 186172700 -64515154 + MER74A LTR ERVL 7 478 -80 1018 152 44 0 chr2 186172728 186172886 -64514968 + L1PB4 LINE L1 5991 6155 -1 3229 135 35 20 chr2 186172978 186173517 -64514337 + LTR10A LTR ERV1 1 547 -62 525 281 68 86 chr2 186173756 186174243 -64513611 - MLT1J LTR MaLR -33 478 1 192 158 0 0 chr2 186174672 186174710 -64513144 + A-rich Low_complexity Low_complexity 1 38 0 231 285 55 93 chr2 186175020 186175530 -64512324 + HAL1 LINE L1 1048 1539 -968 2294 102 3 0 chr2 186175530 186175834 -64512020 - AluSp SINE Alu -7 306 2 231 285 55 93 chr2 186175834 186175852 -64512002 + HAL1 LINE L1 1539 1556 -951 862 166 20 96 chr2 186175860 186175957 -64511897 + AluJb SINE Alu 106 182 -130 2156 107 64 15 chr2 186175957 186176284 -64511570 - MER61A LTR ERV1 0 343 1 862 166 20 96 chr2 186176284 186176385 -64511469 + AluJb SINE Alu 182 289 -23 1786 169 75 38 chr2 186176465 186176838 -64511016 + MLT1B LTR MaLR 4 390 0 379 344 16 0 chr2 186176856 186176984 -64510870 - L2 LINE L2 -1 3271 3142 356 264 163 0 chr2 186177201 186177330 -64510524 + L1ME4a LINE L1 5711 5860 -261 234 0 0 0 chr2 186177345 186177371 -64510483 + (CA)n Simple_repeat Simple_repeat 2 27 0 253 214 71 24 chr2 186177444 186177528 -64510326 + L1ME4a LINE L1 6006 6093 -28 2661 171 71 60 chr2 186177643 186177898 -64509956 + MER63C DNA MER1_type 255 506 -554 2429 136 19 0 chr2 186177898 186178258 -64509596 - L1PA16 LINE L1 -9 6157 5791 2661 171 71 60 chr2 186178258 186178638 -64509216 + MER63C DNA MER1_type 506 897 -33 2094 133 3 3 chr2 186179308 186179617 -64508237 + AluSx SINE Alu 1 309 -3 2096 103 10 19 chr2 186180271 186180583 -64507271 - MER34 LTR ERV1 0 542 234 4174 72 34 38 chr2 186180604 186181650 -64506204 - MER11A LTR ERVK 0 1266 1 2676 140 7 19 chr2 186181652 186182073 -64505781 + MSTB1 LTR MaLR 16 431 -1 1607 130 4 0 chr2 186182073 186182304 -64505550 - MER34 LTR ERV1 -310 232 1 1611 185 25 123 chr2 186182434 186182539 -64505315 + L1MCa LINE L1 155 269 -6295 851 129 9 9 chr2 186182539 186182655 -64505199 + FLAM_C SINE Alu 1 116 -17 1611 185 25 123 chr2 186182655 186183029 -64504825 + L1MCa LINE L1 269 587 -5977 37 23 0 0 chr2 186183034 186183078 -64504776 + AT_rich Low_complexity Low_complexity 1 44 0 873 128 0 50 chr2 186183097 186183238 -64504616 - AluJb SINE Alu -178 134 1 1377 182 53 24 chr2 186183245 186183575 -64504279 + L1MCa LINE L1 474 718 -5327 1275 153 19 2 chr2 186183967 186184272 -64503582 + LTR1B LTR ERV1 447 826 0 41809 63 11 3 chr2 186185105 186186258 -64501596 - L1PA6 LINE L1 -2 6152 5010 2089 139 0 0 chr2 186186258 186186553 -64501301 - AluSq SINE Alu -16 297 3 41809 63 11 3 chr2 186186553 186191503 -64496351 - L1PA6 LINE L1 -1144 5010 1 1748 233 85 18 chr2 186191524 186192458 -64495396 - L1MD3 LINE L1 -13 7982 6898 201 246 40 135 chr2 186192604 186192730 -64495124 - MER5B DNA MER1_type -62 116 3 653 221 60 5 chr2 186192781 186192839 -64495015 + MER5A DNA MER1_type 4 57 -132 2220 131 3 0 chr2 186192839 186193145 -64494709 + AluSq SINE Alu 1 307 -6 653 221 60 5 chr2 186193145 186193261 -64494593 + MER5A DNA MER1_type 57 189 0 203 301 178 0 chr2 186194032 186194105 -64493749 - L2 LINE L2 -2 3270 3185 2233 101 40 0 chr2 186194317 186194615 -64493239 + AluSx SINE Alu 1 310 -2 595 212 31 135 chr2 186194615 186194670 -64493184 - MIR SINE MIR -24 238 179 494 254 143 32 chr2 186194670 186194859 -64492995 + MER63A DNA MER1_type 1 210 0 595 212 31 135 chr2 186194859 186195025 -64492829 - MIR SINE MIR -83 179 40 906 249 48 16 chr2 186195315 186195564 -64492290 - MIR SINE MIR 0 262 6 2009 232 105 2 chr2 186195918 186196383 -64491471 - MER115 DNA AcHobo -3 690 178 948 159 0 0 chr2 186196945 186197121 -64490733 + GA-rich Low_complexity Low_complexity 3 178 0 934 173 16 22 chr2 186197261 186197446 -64490408 - MER5A DNA MER1_type -5 184 1 1773 118 23 0 chr2 186197869 186198131 -64489723 + MER39B LTR ERV1 1 268 -385 2214 101 0 7 chr2 186198136 186198434 -64489420 + AluSx SINE Alu 5 300 -12 1620 181 16 19 chr2 186198445 186198754 -64489100 + AluJo SINE Alu 3 310 -2 286 105 0 0 chr2 186198754 186198792 -64489062 + (GGGA)n Simple_repeat Simple_repeat 3 40 0 665 163 19 12 chr2 186198794 186198954 -64488900 + GA-rich Low_complexity Low_complexity 1 161 0 782 142 128 27 chr2 186198978 186199126 -64488728 + LTR29 LTR ERV1 488 622 0 583 212 25 40 chr2 186200071 186200243 -64487611 - MSTC LTR MaLR -272 185 1 488 204 11 0 chr2 186200596 186200689 -64487165 - MER45B DNA AcHobo 0 1040 947 663 162 19 149 chr2 186200691 186200845 -64487009 + AluJo SINE Alu 2 135 -177 949 173 107 0 chr2 186200852 186201049 -64486805 - MER45B DNA AcHobo -85 955 738 1289 134 179 0 chr2 186201052 186201276 -64486578 - pTR5 LTR ERV1 -823 1615 1352 2242 107 10 7 chr2 186201881 186202189 -64485665 + AluSx SINE Alu 1 309 -3 2268 174 35 28 chr2 186202990 186203139 -64484715 + MSTB1 LTR MaLR 5 151 -281 2414 87 0 3 chr2 186203139 186203438 -64484416 - AluSx SINE Alu -14 298 1 2268 174 35 28 chr2 186203438 186203713 -64484141 + MSTB1 LTR MaLR 151 432 0 1798 212 82 71 chr2 186203797 186204264 -64483590 - MER74B LTR ERVL -68 554 79 1935 147 0 0 chr2 186204264 186204543 -64483311 + AluSx SINE Alu 5 283 -29 1798 212 82 71 chr2 186204543 186204623 -64483231 - MER74B LTR ERVL -543 79 1 292 250 54 0 chr2 186205170 186205262 -64482592 + L1MC/D LINE L1 5664 5760 -2048 2121 121 0 0 chr2 186205303 186205585 -64482269 + AluSx SINE Alu 1 282 -30 225 0 0 0 chr2 186205588 186205613 -64482241 + (TAA)n Simple_repeat Simple_repeat 2 26 0 2256 113 0 7 chr2 186205698 186206008 -64481846 + AluSx SINE Alu 1 308 -4 44 56 0 0 chr2 186206115 186206187 -64481667 + AT_rich Low_complexity Low_complexity 1 72 0 246 62 0 0 chr2 186206471 186206503 -64481351 + (A)n Simple_repeat Simple_repeat 1 32 0 1835 163 10 27 chr2 186206528 186206829 -64481025 + AluJo SINE Alu 1 296 -16 625 93 0 0 chr2 186206882 186206957 -64480897 - Alu SINE Alu -17 294 220 2390 85 0 7 chr2 186207057 186207362 -64480492 - AluSc SINE Alu -6 303 1 328 218 0 152 chr2 186207380 186207545 -64480309 - MER104 DNA Tc2 -38 142 3 226 178 22 0 chr2 186207638 186207683 -64480171 + Zaphod DNA AcHobo 3186 3231 -800 2058 97 30 24 chr2 186207770 186208068 -64479786 - AluSx SINE Alu -12 300 1 291 332 97 40 chr2 186208172 186208552 -64479302 - MLT1J LTR MaLR 0 511 110 209 189 0 0 chr2 186208789 186208826 -64479028 + (GAATG)n Simple_repeat Simple_repeat 1 37 0 496 318 38 24 chr2 186208827 186209116 -64478738 + L1ME LINE L1 4802 5094 -1052 2019 149 3 3 chr2 186209133 186209429 -64478425 + AluSx SINE Alu 1 296 -16 997 183 59 0 chr2 186209541 186209727 -64478127 + MER3 DNA MER1_type 13 209 0 390 237 132 77 chr2 186209737 186210024 -64477830 + L1ME LINE L1 5268 5570 -596 2734 180 119 65 chr2 186210109 186210893 -64476961 - LTR1B LTR ERV1 0 826 1 1561 180 0 40 chr2 186210923 186211223 -64476631 - AluJo SINE Alu -20 292 5 226 342 19 25 chr2 186211276 186211437 -64476417 + L1ME LINE L1 5761 5920 -250 4425 146 42 48 chr2 186211688 186212476 -64475378 - LTR39 LTR ERV1 0 783 1 1656 153 4 0 chr2 186213303 186213551 -64474303 - AluJb SINE Alu -62 250 2 217 210 32 16 chr2 186214180 186214242 -64473612 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 298 315 64 109 chr2 186214246 186214557 -64473297 - L2 LINE L2 -33 3239 2943 461 227 85 35 chr2 186214845 186214986 -64472868 - MLT1J2 LTR MaLR 0 450 303 2141 99 39 0 chr2 186215063 186215347 -64472507 - AluSp SINE Alu -18 295 1 377 219 113 102 chr2 186215365 186215469 -64472385 - MLT1K LTR MaLR -174 414 313 2254 154 3 9 chr2 186215469 186215807 -64472047 - MER1B DNA MER1_type -1 336 1 377 219 113 102 chr2 186215807 186215985 -64471869 - MLT1K LTR MaLR -275 313 129 1156 102 11 45 chr2 186216879 186217055 -64470799 - AluSg/x SINE Alu -1 309 140 336 77 39 0 chr2 186217055 186217107 -64470747 - MLT2A1 LTR ERVL 0 453 400 306 114 76 15 chr2 186217141 186217272 -64470582 + (TA)n Simple_repeat Simple_repeat 1 139 0 242 170 28 71 chr2 186217614 186217796 -64470058 + (TA)n Simple_repeat Simple_repeat 2 175 0 250 174 28 67 chr2 186217858 186218036 -64469818 + (TA)n Simple_repeat Simple_repeat 2 172 0 230 230 45 39 chr2 186217995 186218173 -64469681 + (CATA)n Simple_repeat Simple_repeat 2 180 0 * 525 138 3 60 chr2 186218178 186218519 -64469335 + (TA)n Simple_repeat Simple_repeat 1 321 0 2844 65 15 18 chr2 186218519 186218919 -64468935 - MLT2A1 LTR ERVL -44 400 2 767 168 0 0 chr2 186218941 186219066 -64468788 - FLAM_C SINE Alu -8 125 1 374 269 104 52 chr2 186219097 186219113 -64468741 - L3 LINE CR1 -257 1320 1306 2478 143 39 2 chr2 186219113 186219526 -64468328 - MSTA LTR MaLR 0 428 1 374 269 104 52 chr2 186219526 186219702 -64468152 - L3 LINE CR1 -271 1306 1118 367 337 63 39 chr2 186219702 186219881 -64467973 - L3 LINE CR1 -1019 558 370 2081 137 3 3 chr2 186219881 186220180 -64467674 - AluSx SINE Alu -13 299 1 367 337 63 39 chr2 186220180 186220255 -64467599 - L3 LINE CR1 -1207 370 298 460 303 105 17 chr2 186221129 186221367 -64466487 + LTR16A LTR ERVL 139 397 -53 313 230 136 112 chr2 186221995 186222282 -64465572 + L1ME4a LINE L1 5735 6028 -93 1074 205 87 60 chr2 186222305 186222686 -64465168 + MSTD LTR MaLR 1 391 -5 47 86 0 0 chr2 186222692 186222809 -64465045 + AT_rich Low_complexity Low_complexity 1 117 0 2111 129 3 10 chr2 186222811 186223114 -64464740 + AluSx SINE Alu 1 301 -11 28 29 0 0 chr2 186223335 186223370 -64464484 + AT_rich Low_complexity Low_complexity 1 35 0 697 282 161 8 chr2 186223605 186224099 -64463755 - L1ME3A LINE L1 -255 5915 5337 246 235 0 0 chr2 186224112 186224163 -64463691 + L2 LINE L2 3219 3269 -3 2376 89 3 0 chr2 186224429 186224722 -64463132 - AluSp SINE Alu -19 294 1 862 217 22 0 chr2 186224859 186225039 -64462815 - LTR28 LTR ERV1 0 1020 837 5484 126 159 25 chr2 186225231 186226329 -64461525 - MER52C LTR ERV1 0 1278 34 848 179 26 13 chr2 186226450 186226601 -64461253 + FRAM SINE Alu 4 156 -10 315 275 106 42 chr2 186226675 186227065 -64460789 + LTR16B LTR ERVL 10 464 0 2132 94 28 3 chr2 186227104 186227390 -64460464 + AluSq SINE Alu 1 293 -20 281 237 66 0 chr2 186227647 186227723 -64460131 - MIR SINE MIR -2 260 180 1410 204 56 67 chr2 186228211 186228751 -64459103 - L1M4 LINE L1 -2195 3951 3418 418 247 82 59 chr2 186229106 186229152 -64458702 - LTR33A LTR ERVL 0 523 480 2264 106 0 3 chr2 186229152 186229453 -64458401 + AluSx SINE Alu 1 300 -12 418 247 82 59 chr2 186229453 186229625 -64458229 - LTR33A LTR ERVL -43 480 300 2176 116 20 0 chr2 186229942 186230245 -64457609 + AluSq SINE Alu 1 309 -4 282 286 0 0 chr2 186231256 186231319 -64456535 + L2 LINE L2 3250 3312 -1 904 188 24 12 chr2 186232764 186232934 -64454920 - AluJo SINE Alu -19 293 122 872 126 35 0 chr2 186233154 186233297 -64454557 + L1MB5 LINE L1 6012 6159 -15 25 0 0 0 chr2 186233309 186233334 -64454520 + AT_rich Low_complexity Low_complexity 1 25 0 2153 128 7 0 chr2 186234389 186234695 -64453159 + AluSq SINE Alu 1 308 -5 425 193 63 142 chr2 186235584 186235710 -64452144 + L1M4 LINE L1 4398 4496 -1650 1522 145 114 16 chr2 186235710 186235965 -64451889 + AluSx SINE Alu 1 280 -32 425 193 63 142 chr2 186235965 186236092 -64451762 + L1M4 LINE L1 4496 4631 -1515 624 179 160 0 chr2 186236904 186237036 -64450818 + MER5A DNA MER1_type 4 160 -29 465 285 72 10 chr2 186237660 186237867 -64449987 - L1M4 LINE L1 -2229 3917 3698 329 319 160 37 chr2 186237879 186238255 -64449599 - L1M4 LINE L1 -2468 3678 3257 1416 156 133 30 chr2 186238374 186238713 -64449141 - THE1C LTR MaLR -1 374 1 710 88 88 0 chr2 186238950 186239064 -64448790 + LTR19C LTR ERV1 1 124 -655 * 3238 115 48 8 chr2 186239053 186239568 -64448286 + LTR19C LTR ERV1 244 779 0 1887 188 3 0 chr2 186242658 186242967 -64444887 + AluJb SINE Alu 1 310 -2 467 309 0 40 chr2 186243166 186243318 -64444536 - MER5A DNA MER1_type -1 188 43 1717 188 3 3 chr2 186244694 186244976 -64442878 + AluJo SINE Alu 1 282 -30 21 82 0 0 chr2 186244976 186245025 -64442829 + AT_rich Low_complexity Low_complexity 1 49 0 1356 102 83 19 chr2 186245479 186245695 -64442159 - MER30 DNA MER1_type 0 230 1 2150 96 44 7 chr2 186245739 186246032 -64441822 + AluSx SINE Alu 1 304 -8 27 0 0 0 chr2 186247246 186247273 -64440581 + AT_rich Low_complexity Low_complexity 1 27 0 299 62 21 0 chr2 186247425 186247473 -64440381 - LTR12 LTR ERV1 0 714 666 2220 148 108 96 chr2 186247483 186248373 -64439481 + Harlequin LTR ERV1 840 1740 -5156 * 5511 89 1 1 chr2 186248371 186249145 -64438709 + Harlequin LTR ERV1 7626 8399 0 4936 66 79 2 chr2 186249146 186249782 -64438072 + LTR12 LTR ERV1 2 686 -2 351 237 188 5 chr2 186250417 186250603 -64437251 + LTR33 LTR ERVL 15 234 -287 355 283 142 19 chr2 186250632 186250837 -64437017 + LTR33 LTR ERVL 292 521 0 527 263 25 79 chr2 186250861 186251139 -64436715 + MERVL LTR ERVL 3503 3765 -1889 403 311 44 20 chr2 186251130 186251445 -64436409 + MERVL LTR ERVL 3841 4122 -1363 * 619 287 134 9 chr2 186251542 186251765 -64436089 - MIR SINE MIR -3 259 9 330 230 71 9 chr2 186252036 186252149 -64435705 + L1MB7 LINE L1 5046 5165 -981 950 133 0 21 chr2 186252150 186252293 -64435561 + FLAM_C SINE Alu 1 140 -3 424 182 30 0 chr2 186252296 186252395 -64435459 + L1MB7 LINE L1 5161 5262 -884 198 193 24 12 chr2 186252397 186252480 -64435374 + (TA)n Simple_repeat Simple_repeat 1 84 0 228 294 0 0 chr2 186252485 186252570 -64435284 + L1MC4 LINE L1 6619 6703 -1339 3251 174 62 0 chr2 186252618 186253327 -64434527 + L1MB7 LINE L1 5274 6026 -158 2034 139 3 3 chr2 186253333 186253635 -64434219 - AluSx SINE Alu -9 303 2 4742 118 78 27 chr2 186253950 186254736 -64433118 + LTR12 LTR ERV1 1 826 0 750 65 156 2 chr2 186254736 186254863 -64432991 + LTR12 LTR ERV1 155 714 0 2296 89 20 0 chr2 186255815 186256107 -64431747 - AluY SINE Alu -13 298 1 2108 137 0 0 chr2 186256382 186256674 -64431180 + AluSx SINE Alu 18 309 -3 1713 194 0 13 chr2 186256692 186257007 -64430847 + AluJo SINE Alu 1 311 -1 1800 153 0 62 chr2 186257025 186257345 -64430509 + AluJo SINE Alu 5 304 -8 468 266 98 0 chr2 186257352 186257536 -64430318 + L1ME LINE L1 5615 5816 -305 1843 168 16 10 chr2 186258398 186258708 -64429146 + AluSx SINE Alu 1 312 0 1610 105 18 13 chr2 186259163 186259391 -64428463 + AluSg/x SINE Alu 84 312 0 2004 164 0 3 chr2 186260460 186260770 -64427084 + AluSx SINE Alu 1 309 -3 2500 162 53 36 chr2 186261251 186261283 -64426571 - L1MB7 LINE L1 -10 6174 6144 2151 109 7 0 chr2 186261283 186261577 -64426277 + AluSx SINE Alu 1 296 -16 2500 162 53 36 chr2 186261577 186262092 -64425762 - L1MB7 LINE L1 -40 6144 5618 319 254 263 13 chr2 186262505 186262958 -64424896 + HAL1 LINE L1 871 1436 -1071 3553 194 129 71 chr2 186263070 186264444 -64423410 + L1M4 LINE L1 2 1456 -5086 2189 240 47 24 chr2 186264431 186265942 -64421912 + L1M4 LINE L1 1739 3378 -3266 * 2159 95 13 13 chr2 186266284 186266589 -64421265 + AluSg SINE Alu 1 305 -5 28 48 0 0 chr2 186266672 186266714 -64421140 + AT_rich Low_complexity Low_complexity 1 42 0 1416 178 0 29 chr2 186266742 186267017 -64420837 + AluJo SINE Alu 1 267 -45 318 172 248 55 chr2 186267069 186267219 -64420635 + MIR SINE MIR 16 191 -62 31 0 0 0 chr2 186267242 186267273 -64420581 + AT_rich Low_complexity Low_complexity 1 31 0 671 179 89 8 chr2 186268578 186268701 -64419153 + AluJo SINE Alu 2 134 -178 748 217 104 32 chr2 186269203 186269424 -64418430 - MIR SINE MIR -14 248 12 2337 85 13 3 chr2 186270057 186270363 -64417491 - AluSg SINE Alu -1 309 1 708 160 80 16 chr2 186271706 186271831 -64416023 - FLAM_C SINE Alu 0 133 1 2214 100 13 7 chr2 186271841 186272142 -64415712 - AluSx SINE Alu -9 303 1 289 233 45 95 chr2 186272361 186272553 -64415301 + L1ME LINE L1 5588 5788 -374 1690 124 89 0 chr2 186272814 186272863 -64414991 + AluSg SINE Alu 1 44 -259 207 0 0 0 chr2 186272863 186272886 -64414968 + (CAGG)n Simple_repeat Simple_repeat 2 24 0 1690 124 89 0 chr2 186272886 186273116 -64414738 + AluSg SINE Alu 44 303 0 2342 85 3 3 chr2 186274568 186274863 -64412991 - AluSp SINE Alu -18 295 1 624 267 6 12 chr2 186274873 186275045 -64412809 - MARNA DNA Mariner -19 567 397 270 236 281 0 chr2 186275216 186275305 -64412549 + MIR SINE MIR 5 118 -144 711 276 60 21 chr2 186275646 186275969 -64411885 + Charlie8 DNA MER1_type 37 366 -2051 21 0 0 0 chr2 186276461 186276482 -64411372 + AT_rich Low_complexity Low_complexity 1 21 0 241 243 186 0 chr2 186276521 186276591 -64411263 + MIR SINE MIR 66 148 -114 338 267 147 0 chr2 186277820 186277936 -64409918 + MIR SINE MIR 5 137 -125 1590 167 20 33 chr2 186277948 186278248 -64409606 + AluJo SINE Alu 2 297 -15 1568 179 17 21 chr2 186278270 186278560 -64409294 + AluJb SINE Alu 1 289 -23 2265 115 0 3 chr2 186278566 186278871 -64408983 + AluSx SINE Alu 1 304 -8 185 277 92 0 chr2 186278884 186278949 -64408905 + MIR SINE MIR 136 206 -56 2292 75 0 0 chr2 186279168 186279471 -64408383 + AluSg SINE Alu 1 303 0 862 50 0 0 chr2 186280163 186280262 -64407592 + HY3 scRNA scRNA 2 100 -1 1489 174 84 0 chr2 186280285 186280560 -64407294 + AluJo SINE Alu 1 298 -14 886 88 40 40 chr2 186280642 186280767 -64407087 + FLAM_C SINE Alu 3 127 -6 324 0 0 0 chr2 186280768 186280804 -64407050 + (CA)n Simple_repeat Simple_repeat 2 37 0 27 29 0 0 chr2 186282195 186282229 -64405625 + GC_rich Low_complexity Low_complexity 1 34 0 385 258 153 25 chr2 186282957 186283120 -64404734 + MIR SINE MIR 67 250 -12 1546 135 51 26 chr2 186283331 186283668 -64404186 - MER4A LTR ERV1 0 664 261 595 94 31 10 chr2 186283668 186283764 -64404090 - MER4A LTR ERV1 -566 98 1 1339 180 161 28 chr2 186284571 186284739 -64403115 + MLT1A1 LTR MaLR 1 145 -220 2767 199 44 93 chr2 186284739 186284982 -64402872 + LTR8 LTR ERV1 1 254 -437 1523 160 74 4 chr2 186284982 186285251 -64402603 + AluJo SINE Alu 1 288 -24 2767 199 44 93 chr2 186285251 186285734 -64402120 + LTR8 LTR ERV1 254 691 0 1339 180 161 28 chr2 186285734 186285887 -64401967 + MLT1A1 LTR MaLR 145 365 0 535 261 73 18 chr2 186286143 186286361 -64401493 + LTR33 LTR ERVL 290 519 -2 1978 159 87 10 chr2 186286367 186286758 -64401096 - LTR37A LTR ERV1 -5 421 1 290 336 0 0 chr2 186337566 186337676 -64350178 + PABL_B-int LTR ERV1 1505 1614 -5062 324 356 25 34 chr2 186337959 186338279 -64349575 + PABL_B-int LTR ERV1 974 1290 -5832 2119 77 15 0 chr2 186338468 186338742 -64349112 + AluY SINE Alu 22 299 -12 2158 159 11 83 chr2 186338742 186339288 -64348566 - MER61-int LTR ERV1 -4438 2058 632 507 158 0 12 chr2 186339304 186339386 -64348468 - MER61-int LTR ERV1 -885 3995 3915 925 201 27 58 chr2 186339399 186339658 -64348196 - MER61-int LTR ERV1 -440 4777 4527 2168 46 16 23 chr2 186339775 186340079 -64347775 - AluY SINE Alu -9 302 1 2628 100 64 2 chr2 186340081 186340490 -64347364 + LTR56 LTR ERV1 12 445 0 1948 132 44 0 chr2 186342692 186342987 -64344867 - AluSx SINE Alu -4 308 1 222 267 27 27 chr2 186342995 186343070 -64344784 - L3b LINE CR1 -117 1466 1392 373 365 0 0 chr2 186343208 186343386 -64344468 + G-rich Low_complexity Low_complexity 1 178 0 183 80 0 0 chr2 186343458 186343483 -64344371 + (A)n Simple_repeat Simple_repeat 1 25 0 666 274 34 38 chr2 186343637 186343903 -64343951 - MLT1J LTR MaLR -244 267 3 23 0 0 0 chr2 186344074 186344097 -64343757 + AT_rich Low_complexity Low_complexity 1 23 0 299 275 12 12 chr2 186344291 186344371 -64343483 - L2 LINE L2 -1 3271 3192 861 134 7 21 chr2 186344701 186344843 -64343011 - AluSg/x SINE Alu -13 297 158 289 235 0 49 chr2 186345478 186345559 -64342295 - MIR SINE MIR -117 145 69 3450 73 15 33 chr2 186346619 186346919 -64340935 + MER41A LTR ERV1 83 387 -167 1867 105 0 36 chr2 186346919 186347224 -64340630 + AluSc SINE Alu 1 294 -15 1800 154 3 3 chr2 186347234 186347520 -64340334 + AluSx SINE Alu 14 299 -13 3450 73 15 33 chr2 186347520 186347689 -64340165 + MER41A LTR ERV1 396 554 0 3913 93 4 4 chr2 186347745 186348280 -64339574 - L1PA13 LINE L1 -2 6161 5627 290 137 0 0 chr2 186349120 186349171 -64338683 - MER93b LTR ERV1 0 373 323 3364 155 36 63 chr2 186349171 186349836 -64338018 - MER4D LTR ERV1 0 903 257 5317 105 20 5 chr2 186349837 186350589 -64337265 + MER4E LTR ERV1 1 763 -16 380 115 0 0 chr2 186350594 186350646 -64337208 - Alu SINE Alu -247 52 1 2634 117 71 41 chr2 186350648 186351088 -64336766 - MER4D LTR ERV1 -427 476 20 1992 130 11 0 chr2 186351088 186351373 -64336481 - AluSx SINE Alu -24 288 1 2634 117 71 41 chr2 186351373 186351394 -64336460 - MER4D LTR ERV1 -883 20 1 2724 105 93 0 chr2 186351487 186351897 -64335957 - LTR7 LTR ERV1 -2 448 1 2612 198 20 56 chr2 186352009 186352666 -64335188 - LTR27 LTR ERV1 0 636 4 917 137 7 0 chr2 186352669 186352808 -64335046 - LTR27-int LTR ERV1 -1 7090 6951 328 269 0 69 chr2 186353123 186353253 -64334601 + MIR SINE MIR 102 222 -40 395 240 41 75 chr2 186354148 186354188 -64333666 + MIR SINE MIR 84 124 -138 2290 89 7 0 chr2 186354188 186354479 -64333375 - AluSg SINE Alu -17 293 1 395 240 41 75 chr2 186354479 186354584 -64333270 + MIR SINE MIR 124 224 -38 1209 208 4 21 chr2 186354791 186355032 -64332822 + MER8 DNA MER2_type 2 238 -1 1970 140 55 0 chr2 186356601 186356894 -64330960 + AluSx SINE Alu 1 309 -3 1172 155 19 19 chr2 186356908 186357121 -64330733 + AluSq SINE Alu 1 213 -100 1739 167 0 50 chr2 186357878 186358177 -64329677 + AluJo SINE Alu 1 284 -28 277 253 0 63 chr2 186358257 186358352 -64329502 - MIR3 SINE MIR -11 197 109 1959 325 70 44 chr2 186359148 186360525 -64327329 + PABL_B-int LTR ERV1 2877 4288 -2834 3491 78 0 0 chr2 186361151 186361601 -64326253 + L1PA7 LINE L1 5705 6154 0 10528 132 25 22 chr2 186361637 186363384 -64324470 + PABL_B-int LTR ERV1 2242 3993 -1224 299 177 0 32 chr2 186363387 186363449 -64324405 + PABL_B-int LTR ERV1 4918 4977 -240 1160 115 11 33 chr2 186363449 186363632 -64324222 - AluSg/x SINE Alu -14 298 120 1226 108 0 0 chr2 186365284 186365441 -64322413 - AluSx SINE Alu -155 157 1 976 199 15 31 chr2 186365579 186365775 -64322079 - AluJb SINE Alu -18 294 102 509 82 41 14 chr2 186365776 186365849 -64322005 - MLT1A1 LTR MaLR -290 75 1 4390 135 42 6 chr2 186366085 186366804 -64321050 + L1PA16 LINE L1 5420 6164 -2 18030 44 4 3 chr2 186366997 186370069 -64317785 - L1PA5 LINE L1 -250 5904 2845 1055 253 30 15 chr2 186370126 186370668 -64317186 - HUERS-P1 LTR ERV1 -5549 714 1 312 294 42 21 chr2 186370668 186370811 -64317043 - LTR8 LTR ERV1 0 691 546 1981 249 59 25 chr2 186371065 186371592 -64316262 - MLT1H1 LTR MaLR -10 545 1 2432 89 0 6 chr2 186371842 186372155 -64315699 - AluSx SINE Alu -1 311 1 1402 236 20 23 chr2 186373655 186374003 -64313851 - MER87 LTR ERV1 -1 540 194 5779 148 65 52 chr2 186375334 186375545 -64312309 - MER57-int LTR ERV1 -2071 4925 4718 1752 165 20 10 chr2 186375545 186375842 -64312012 + AluSx SINE Alu 1 300 -12 5779 148 65 52 chr2 186375842 186375910 -64311944 - MER57-int LTR ERV1 -2278 4718 4652 2153 114 0 17 chr2 186375910 186376207 -64311647 - AluSx SINE Alu -16 296 5 5779 148 65 52 chr2 186376207 186377027 -64310827 - MER57-int LTR ERV1 -2344 4652 3844 1929 160 0 0 chr2 186377027 186377320 -64310534 - AluSx SINE Alu -15 297 5 5779 148 65 52 chr2 186377320 186377722 -64310132 - MER57-int LTR ERV1 -3152 3844 3449 1775 168 39 3 chr2 186377722 186378007 -64309847 - AluSx SINE Alu -17 295 1 5779 148 65 52 chr2 186378007 186378263 -64309591 - MER57-int LTR ERV1 -3547 3449 2357 478 41 27 0 chr2 186378264 186378337 -64309517 + (TTTA)n Simple_repeat Simple_repeat 3 77 0 2778 23 7 0 chr2 186378337 186378640 -64309214 - SVA Other Other -23 1363 1059 32 26 0 0 chr2 186379157 186379196 -64308658 + AT_rich Low_complexity Low_complexity 1 39 0 233 257 71 57 chr2 186380713 186380853 -64307001 - L2 LINE L2 -23 3290 3149 191 293 0 17 chr2 186380966 186381024 -64306830 - L2 LINE L2 -88 3225 3169 337 321 107 0 chr2 186381207 186381347 -64306507 - L2 LINE L2 -200 3072 2918 209 255 20 0 chr2 186381496 186381547 -64306307 + (CACG)n Simple_repeat Simple_repeat 1 52 0 1840 131 43 7 chr2 186381865 186382147 -64305707 + AluSx SINE Alu 1 292 -20 430 310 153 31 chr2 186382159 186382485 -64305369 + MLT1K LTR MaLR 5 370 -218 511 177 53 26 chr2 186382512 186382625 -64305229 + MLT1K LTR MaLR 470 585 -3 263 231 188 0 chr2 186382893 186383010 -64304844 - L2 LINE L2 0 3272 3134 450 233 157 38 chr2 186384309 186384468 -64303386 + MER5B DNA MER1_type 1 178 0 410 255 122 21 chr2 186384886 186385052 -64302802 + MER5A DNA MER1_type 4 188 -1 208 143 0 0 chr2 186385987 186386022 -64301832 + (T)n Simple_repeat Simple_repeat 1 35 0 1300 62 0 0 chr2 186386022 186386184 -64301670 - L1PA3 LINE L1 0 6155 5994 243 179 24 48 chr2 186386187 186386271 -64301583 + C-rich Low_complexity Low_complexity 4 85 0 21 36 0 0 chr2 186386360 186386388 -64301466 + GC_rich Low_complexity Low_complexity 1 28 0 605 150 19 99 chr2 186387326 186387402 -64300452 + MSTC LTR MaLR 4 85 -311 2444 87 0 0 chr2 186387402 186387702 -64300152 - AluY SINE Alu -11 300 1 605 150 19 99 chr2 186387702 186387806 -64300048 + MSTC LTR MaLR 85 173 -223 21 89 0 0 chr2 186387960 186388016 -64299838 + AT_rich Low_complexity Low_complexity 1 56 0 285 252 168 42 chr2 186388782 186388925 -64298929 - MIR3 SINE MIR -15 193 33 5092 214 64 60 chr2 186389718 186391093 -64296761 - LTR27-int LTR ERV1 -5710 1381 1 2180 216 19 76 chr2 186391096 186391768 -64296086 - LTR27 LTR ERV1 0 636 3 304 328 141 16 chr2 186391838 186392030 -64295824 - MLT1K LTR MaLR -165 423 208 372 22 0 0 chr2 186392056 186392101 -64295753 + (CA)n Simple_repeat Simple_repeat 1 45 0 2462 189 64 8 chr2 186392368 186392870 -64294984 - MER34C LTR ERV1 -54 531 2 1929 137 22 0 chr2 186392877 186393204 -64294650 - AluSg SINE Alu 0 333 1 849 186 6 35 chr2 186393663 186393692 -64294162 + LTR8 LTR ERV1 1 29 -662 2046 130 3 7 chr2 186393692 186393977 -64293877 + AluSx SINE Alu 9 292 -20 849 186 6 35 chr2 186393977 186394119 -64293735 + LTR8 LTR ERV1 29 167 -524 225 336 0 0 chr2 186394594 186394722 -64293132 + (CA)n Simple_repeat Simple_repeat 2 129 0 * 396 283 0 0 chr2 186394714 186394859 -64292995 + (TA)n Simple_repeat Simple_repeat 2 146 0 342 264 0 0 chr2 186394893 186394999 -64292855 + (TA)n Simple_repeat Simple_repeat 1 106 0 1492 180 58 17 chr2 186394999 186395166 -64292688 - AluJb SINE Alu -5 307 121 186 43 0 0 chr2 186395166 186395189 -64292665 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 1492 180 58 17 chr2 186395189 186395316 -64292538 - AluJb SINE Alu -191 121 1 1501 158 0 54 chr2 186395325 186395604 -64292250 - AluJb SINE Alu -4 308 45 188 350 49 39 chr2 186396670 186396873 -64290981 - L3 LINE CR1 -824 753 549 564 350 9 0 chr2 186396992 186397209 -64290645 + MIR SINE MIR 24 242 -20 1938 123 87 3 chr2 186397349 186397707 -64290147 - L1MA5A LINE L1 -2 6295 5908 371 219 25 38 chr2 186399709 186399869 -64287985 + G-rich Low_complexity Low_complexity 6 163 0 2022 70 6 51 chr2 186399938 186400252 -64287602 - AluY SINE Alu -11 300 1 22 35 0 0 chr2 186400252 186400281 -64287573 + AT_rich Low_complexity Low_complexity 1 29 0 1595 137 18 28 chr2 186400354 186400663 -64287191 + AluSx SINE Alu 1 306 0 1082 146 15 131 chr2 186400955 186401222 -64286632 - MER46A DNA MER2_type 0 236 1 2028 137 3 3 chr2 186401551 186401850 -64286004 + AluJb SINE Alu 1 299 -13 542 261 197 39 chr2 186402224 186402660 -64285194 + L1MC4a LINE L1 5674 6178 -1630 207 174 0 116 chr2 186402910 186402979 -64284875 - L2 LINE L2 -28 3244 3184 208 316 126 0 chr2 186403782 186403877 -64283977 + MIR3 SINE MIR 51 157 -51 887 191 0 22 chr2 186404037 186404215 -64283639 - FRAM SINE Alu 0 176 3 503 115 35 0 chr2 186405150 186405237 -64282617 + L1MB2 LINE L1 6075 6164 -7 220 275 202 18 chr2 186405802 186405911 -64281943 + MIR3 SINE MIR 30 158 -50 1760 177 3 16 chr2 186407560 186407876 -64279978 + AluJb SINE Alu 1 312 0 294 29 0 0 chr2 186408427 186408462 -64279392 + (CA)n Simple_repeat Simple_repeat 1 35 0 347 299 79 0 chr2 186409970 186410097 -64277757 - MIR SINE MIR -123 139 3 250 233 111 44 chr2 186411038 186411128 -64276726 - L2 LINE L2 -36 3236 3141 357 140 0 0 chr2 186412227 186412284 -64275570 + MIR3 SINE MIR 112 168 -40 189 327 0 0 chr2 186413070 186413125 -64274729 + L2 LINE L2 3212 3266 -6 386 262 90 7 chr2 186413129 186413274 -64274580 - MIR SINE MIR -2 260 104 396 319 0 0 chr2 186414643 186414803 -64273051 + G-rich Low_complexity Low_complexity 1 160 0 1761 207 114 13 chr2 186415331 186415786 -64272068 + Charlie4a DNA MER1_type 1 501 -7 23 0 0 0 chr2 186416712 186416735 -64271119 + AT_rich Low_complexity Low_complexity 1 23 0 1786 141 3 72 chr2 186417031 186417350 -64270504 + AluSx SINE Alu 1 297 -15 2051 100 7 10 chr2 186418139 186418429 -64269425 + AluSq SINE Alu 1 289 -24 273 213 102 19 chr2 186420655 186420763 -64267091 - HAL1 LINE L1 -130 2377 2261 335 310 48 53 chr2 186420864 186421051 -64266803 - HAL1b LINE L1 -436 912 727 308 271 19 47 chr2 186421366 186421473 -64266381 - HAL1 LINE L1 -604 1903 1800 828 294 184 30 chr2 186421495 186421741 -64266113 - HAL1 LINE L1 -773 1734 1527 1636 134 52 58 chr2 186421741 186422032 -64265822 - AluSx SINE Alu -19 293 5 828 294 184 30 chr2 186422032 186422558 -64265296 - HAL1 LINE L1 -980 1527 843 906 190 18 0 chr2 186422847 186423010 -64264844 + AluSg/x SINE Alu 132 297 -13 2109 127 0 3 chr2 186423934 186424233 -64263621 - AluSx SINE Alu -6 306 9 26 0 0 0 chr2 186424250 186424276 -64263578 + AT_rich Low_complexity Low_complexity 1 26 0 315 324 27 9 chr2 186425582 186425693 -64262161 + L2 LINE L2 3191 3303 -10 676 189 146 90 chr2 186425839 186426024 -64261830 - MLT1D LTR MaLR -7 498 296 795 148 8 0 chr2 186426024 186426152 -64261702 - L1PA15 LINE L1 -5 6160 6032 676 189 146 90 chr2 186426152 186426199 -64261655 - MLT1D LTR MaLR -209 296 253 445 265 0 77 chr2 186426242 186426412 -64261442 - MLT1D LTR MaLR -469 157 1 415 316 143 29 chr2 186426538 186426698 -64261156 + L2 LINE L2 2850 2990 -323 1898 107 4 0 chr2 186426698 186426960 -64260894 + AluSc SINE Alu 47 309 0 415 316 143 29 chr2 186426960 186427211 -64260643 + L2 LINE L2 2990 3308 -5 266 171 0 0 chr2 186427366 186427407 -64260447 + MLT1D LTR MaLR 126 166 -339 1929 129 25 3 chr2 186427503 186427789 -64260065 - AluJb SINE Alu -20 292 1 221 186 29 71 chr2 186427943 186428013 -64259841 - L2 LINE L2 0 3272 3206 561 239 178 22 chr2 186429325 186429555 -64258299 + L2 LINE L2 2137 2402 -912 2183 90 35 0 chr2 186429555 186429843 -64258011 - AluSx SINE Alu -14 298 1 1162 143 0 0 chr2 186429867 186430035 -64257819 - AluSx SINE Alu -18 294 127 501 149 37 0 chr2 186430062 186430223 -64257631 + (TA)n Simple_repeat Simple_repeat 1 167 0 935 132 0 0 chr2 186430232 186430361 -64257493 - AluSx SINE Alu -184 129 1 666 265 58 136 chr2 186430363 186431090 -64256764 + L2 LINE L2 2396 3028 -285 1935 118 89 0 chr2 186431090 186431370 -64256484 - AluSp SINE Alu -8 305 1 666 265 58 136 chr2 186431370 186431618 -64256236 + L2 LINE L2 3028 3294 -19 553 255 70 6 chr2 186432536 186432693 -64255161 - MIR SINE MIR -84 178 12 381 324 53 32 chr2 186433247 186433531 -64254323 + HERV17 LTR ERV1 6065 6354 -2272 803 232 71 77 chr2 186433533 186433873 -64253981 + LTR8A LTR ERV1 289 626 -101 2839 123 77 30 chr2 186433892 186434362 -64253492 - LTR22B LTR ERVK 0 492 1 31496 108 6 3 chr2 186434362 186438695 -64249159 - HERVK22 LTR ERVK 0 6837 2493 374 153 0 0 chr2 186438687 186438746 -64249108 - HERVK22 LTR ERVK -3930 2907 2849 * 212 0 36 0 chr2 186438746 186438774 -64249080 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 780 176 59 0 chr2 186438795 186438931 -64248923 - HERVK22 LTR ERVK -4367 2470 2327 4484 135 35 26 chr2 186439352 186440084 -64247770 - HERVK22 LTR ERVK -6096 741 3 3213 97 53 32 chr2 186440089 186440563 -64247291 - LTR22B LTR ERVK -4 488 5 598 128 11 21 chr2 186440568 186440662 -64247192 + LTR8 LTR ERV1 599 691 0 * 1574 152 136 14 chr2 186440662 186441105 -64246749 - MER72 LTR ERV1 -19 703 1 1882 156 3 25 chr2 186441326 186441640 -64246214 + AluSx SINE Alu 1 307 -5 382 262 84 0 chr2 186442286 186442393 -64245461 - MIR SINE MIR -119 143 28 471 273 175 0 chr2 186442400 186442554 -64245300 + MER5A DNA MER1_type 9 189 0 281 263 53 0 chr2 186443301 186443377 -64244477 + MIR3 SINE MIR 124 203 -5 2058 100 3 70 chr2 186443460 186443791 -64244063 + AluSq SINE Alu 4 312 -1 335 270 96 0 chr2 186443808 186443923 -64243931 - MIR SINE MIR -118 144 19 509 271 28 34 chr2 186444079 186444256 -64243598 - MER5B DNA MER1_type -1 177 2 1866 112 27 14 chr2 186444321 186444615 -64243239 - AluSq SINE Alu -15 298 1 1806 141 36 0 chr2 186445876 186446152 -64241702 - AluJo SINE Alu -25 287 2 305 319 0 0 chr2 186446806 186446897 -64240957 - L1MC4 LINE L1 -1340 6702 6612 24 32 0 0 chr2 186450288 186450319 -64237535 + AT_rich Low_complexity Low_complexity 1 31 0 28 48 0 0 chr2 186450378 186450420 -64237434 + AT_rich Low_complexity Low_complexity 1 42 0 496 286 42 21 chr2 186452715 186452904 -64234950 - MER3 DNA MER1_type -12 197 5 353 214 0 56 chr2 186453269 186453358 -64234496 - MIR3 SINE MIR -42 166 83 1763 156 21 17 chr2 186453518 186453807 -64234047 + AluJo SINE Alu 1 290 -22 487 205 211 6 chr2 186454214 186454380 -64233474 - MER46C DNA MER2_type -137 201 2 250 245 88 29 chr2 186455514 186455616 -64232238 - L1MC5 LINE L1 -47 7914 7807 1451 167 54 31 chr2 186455711 186456005 -64231849 - AluJb SINE Alu -11 301 1 1634 162 0 4 chr2 186458705 186458971 -64228883 - AluJo SINE Alu -12 300 36 225 387 116 11 chr2 186459065 186459246 -64228608 + L3 LINE CR1 32 231 -1346 261 297 63 27 chr2 186459413 186459524 -64228330 + MIR SINE MIR 21 135 -73 227 294 110 14 chr2 186459621 186459767 -64228087 + MIR SINE MIR 96 255 -7 1977 141 10 7 chr2 186460024 186460328 -64227526 + AluJo SINE Alu 1 305 -7 933 310 116 48 chr2 186460608 186461386 -64226468 + L3 LINE CR1 595 1425 -152 273 331 107 0 chr2 186462478 186462599 -64225255 + L2 LINE L2 3137 3270 -2 588 318 31 8 chr2 186462892 186463147 -64224707 + MIR SINE MIR 2 262 0 451 290 107 12 chr2 186466425 186466594 -64221260 + MIR SINE MIR 2 186 -76 457 173 36 36 chr2 186466629 186466739 -64221115 - MIR SINE MIR -53 209 100 2063 133 3 0 chr2 186467234 186467535 -64220319 - AluSq SINE Alu -8 305 4 326 264 201 14 chr2 186469080 186469224 -64218630 + MER5A DNA MER1_type 19 189 0 2105 137 7 0 chr2 186469326 186469632 -64218222 + AluSq SINE Alu 5 312 -1 436 315 79 33 chr2 186470254 186470495 -64217359 + L2 LINE L2 2985 3236 -36 331 97 16 16 chr2 186471855 186471917 -64215937 + L1MA3 LINE L1 6244 6305 0 207 333 76 35 chr2 186471972 186472143 -64215711 - MIR SINE MIR -50 212 35 236 77 31 62 chr2 186472281 186472346 -64215508 + (CCA)n Simple_repeat Simple_repeat 3 65 0 29 47 0 0 chr2 186473408 186473451 -64214403 + AT_rich Low_complexity Low_complexity 1 43 0 529 289 129 4 chr2 186473528 186473784 -64214070 - L1MC4a LINE L1 -1969 5839 5552 321 223 78 59 chr2 186474844 186475002 -64212852 + MIR SINE MIR 16 177 -60 22 56 0 0 chr2 186475300 186475336 -64212518 + AT_rich Low_complexity Low_complexity 1 36 0 445 288 91 42 chr2 186475431 186475817 -64212037 + L1ME4a LINE L1 5524 5928 -193 2137 74 44 30 chr2 186477242 186477538 -64210316 - AluSp SINE Alu -12 301 2 1812 167 3 7 chr2 186480584 186480871 -64206983 - AluJb SINE Alu -26 286 1 1776 113 4 0 chr2 186485146 186485375 -64202479 - AluSx SINE Alu -82 230 1 311 299 80 7 chr2 186486471 186486608 -64201246 + L1ME4a LINE L1 5971 6117 -4 2182 126 0 3 chr2 186486617 186486911 -64200943 - AluSx SINE Alu -19 293 1 320 176 0 0 chr2 186488306 186488374 -64199480 - L1MA9 LINE L1 -4 6308 6241 221 295 0 0 chr2 186489028 186489089 -64198765 - L3b LINE CR1 -251 1332 1272 196 197 15 15 chr2 186489238 186489304 -64198550 + (TA)n Simple_repeat Simple_repeat 2 67 0 312 246 0 0 chr2 186489304 186489365 -64198489 + Tigger5 DNA MER2_type 2 62 -2261 1087 129 6 0 chr2 186489387 186489558 -64198296 + Tigger5 DNA MER2_type 2086 2257 -66 536 141 0 0 chr2 186489556 186489641 -64198213 - Tigger5 DNA MER2_type -33 2290 2206 * 479 275 35 71 chr2 186489663 186489858 -64197996 - MIR SINE MIR -56 206 21 194 347 80 34 chr2 186489943 186490119 -64197735 + L2 LINE L2 3087 3270 -2 2189 122 0 10 chr2 186490356 186490667 -64197187 + AluSx SINE Alu 1 308 -4 260 311 87 83 chr2 186491983 186492157 -64195697 + L2 LINE L2 2833 3010 -262 2446 85 3 0 chr2 186492157 186492464 -64195390 - AluSp SINE Alu -5 308 1 260 311 87 83 chr2 186492464 186492553 -64195301 + L2 LINE L2 3010 3097 -175 377 372 62 0 chr2 186493730 186493859 -64193995 + L2 LINE L2 3136 3272 0 216 0 0 0 chr2 186595431 186595455 -64092399 + (A)n Simple_repeat Simple_repeat 1 24 0 28 0 0 0 chr2 186595657 186595685 -64092169 + AT_rich Low_complexity Low_complexity 1 28 0 836 192 7 0 chr2 186595685 186595836 -64092018 - AluSg/x SINE Alu -24 286 135 216 0 0 0 chr2 186596198 186596222 -64091632 + (A)n Simple_repeat Simple_repeat 1 24 0 855 145 0 0 chr2 186596223 186596354 -64091500 + THE1A LTR MaLR 225 355 0 2471 136 5 10 chr2 186596354 186596766 -64091088 + THE1A-int LTR MaLR 1 410 -1170 1796 185 3 0 chr2 186597121 186597429 -64090425 + AluSx SINE Alu 1 309 -3 1074 151 6 0 chr2 186597637 186597809 -64090045 - AluSg/x SINE Alu -3 309 137 216 0 0 0 chr2 186598171 186598195 -64089659 + (A)n Simple_repeat Simple_repeat 1 24 0 834 145 0 0 chr2 186598196 186598327 -64089527 + THE1A LTR MaLR 225 355 0 510 124 22 0 chr2 186598327 186598416 -64089438 + THE1A-int LTR MaLR 1 91 -1489 1008 47 16 0 chr2 186598516 186598644 -64089210 + AluY SINE Alu 172 301 -10 680 125 8 50 chr2 186599043 186599183 -64088671 - FLAM_A SINE Alu 0 135 1 432 294 121 19 chr2 186599188 186599453 -64088401 - L1 LINE L1 -757 5389 5098 2547 51 0 0 chr2 186599471 186599766 -64088088 - AluY SINE Alu -16 295 1 448 250 148 0 chr2 186599807 186599915 -64087939 + MIR SINE MIR 3 126 -136 378 293 17 0 chr2 186600001 186600117 -64087737 + MLT1J1 LTR MaLR 51 168 -278 363 212 0 0 chr2 186600317 186600402 -64087452 + (TA)n Simple_repeat Simple_repeat 2 86 0 2218 123 0 16 chr2 186601399 186601716 -64086138 - AluSx SINE Alu 0 312 1 2182 120 0 13 chr2 186601731 186602047 -64085807 - AluSx SINE Alu 0 312 1 327 384 73 9 chr2 186602325 186602544 -64085310 - L2 LINE L2 -236 3036 2804 2107 108 18 0 chr2 186602601 186602887 -64084967 + AluSg SINE Alu 1 291 -19 621 151 23 29 chr2 186602890 186603020 -64084834 - L1MD1 LINE L1 -5 6237 6108 683 206 0 22 chr2 186603020 186603156 -64084698 - FLAM_A SINE Alu 0 133 1 621 151 23 29 chr2 186603156 186603500 -64084354 - L1MD1 LINE L1 -134 6108 5647 1042 225 58 61 chr2 186603535 186603923 -64083931 - MLT1H LTR MaLR -2 540 106 624 198 9 0 chr2 186603923 186604034 -64083820 - MER81 DNA DNA -2 112 1 1042 225 58 61 chr2 186604034 186604140 -64083714 - MLT1H LTR MaLR -436 106 1 779 163 47 8 chr2 186604969 186605098 -64082756 + FAM SINE Alu 25 158 -27 207 0 0 0 chr2 186605100 186605123 -64082731 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 324 0 0 0 chr2 186605122 186605158 -64082696 + (TG)n Simple_repeat Simple_repeat 1 36 0 228 135 0 0 chr2 186605266 186605303 -64082551 + (TA)n Simple_repeat Simple_repeat 1 37 0 2381 82 0 7 chr2 186605533 186605826 -64082028 + AluSg SINE Alu 2 292 -18 816 151 0 0 chr2 186605935 186606104 -64081750 - AluSg/x SINE Alu 0 334 166 269 287 148 16 chr2 186606130 186606252 -64081602 - MLT1K LTR MaLR -19 569 432 280 299 14 48 chr2 186606294 186606441 -64081413 - MLT1-int LTR MaLR -1154 217 76 1587 227 44 13 chr2 186606514 186606971 -64080883 + MER119 DNA MER1_type 8 478 -105 231 224 61 0 chr2 186606971 186607020 -64080834 + Tigger3(Golem) DNA MER2_type 1 52 -2977 11704 114 19 37 chr2 186607020 186607132 -64080722 + Tigger3(Golem) DNA MER2_type 438 551 -2478 2296 73 0 36 chr2 186607132 186607434 -64080420 + AluY SINE Alu 1 291 -20 11704 114 19 37 chr2 186607434 186608257 -64079597 + Tigger3(Golem) DNA MER2_type 551 1388 -1641 1714 161 0 87 chr2 186608257 186608579 -64079275 - AluSx SINE Alu -10 302 9 11704 114 19 37 chr2 186608579 186608701 -64079153 + Tigger3(Golem) DNA MER2_type 1388 1511 -1518 2428 88 0 0 chr2 186608701 186609007 -64078847 - AluSg SINE Alu -4 306 1 11704 114 19 37 chr2 186609007 186609527 -64078327 + Tigger3(Golem) DNA MER2_type 1511 1975 -1054 2402 96 0 0 chr2 186609527 186609830 -64078024 + AluSq SINE Alu 1 303 -10 11704 114 19 37 chr2 186609830 186610245 -64077609 + Tigger3(Golem) DNA MER2_type 1975 2396 -633 639 120 4 22 chr2 186610246 186610503 -64077351 + AluSx SINE Alu 1 300 -10 3204 104 66 68 chr2 186610506 186610643 -64077211 + Tigger3(Golem) DNA MER2_type 2395 2531 -497 2198 143 0 0 chr2 186610643 186610951 -64076903 + AluSx SINE Alu 5 312 0 3204 104 66 68 chr2 186610951 186611171 -64076683 + Tigger3(Golem) DNA MER2_type 2531 2750 -278 6872 53 15 0 chr2 186611171 186612181 -64075673 - L1PA6 LINE L1 0 6154 5128 3204 104 66 68 chr2 186612181 186612203 -64075651 + Tigger3(Golem) DNA MER2_type 2750 2771 -257 2287 101 0 0 chr2 186612203 186612526 -64075328 - AluSq SINE Alu 0 323 1 3204 104 66 68 chr2 186612526 186612778 -64075076 + Tigger3(Golem) DNA MER2_type 2771 3028 0 432 152 18 62 chr2 186612778 186612890 -64074964 + MER119 DNA MER1_type 477 583 0 456 189 31 0 chr2 186612892 186613019 -64074835 - L1M4 LINE L1 -3150 2996 2866 2432 109 0 0 chr2 186613019 186613331 -64074523 + AluSq SINE Alu 1 312 -1 930 246 90 0 chr2 186613332 186613666 -64074188 - L1M4 LINE L1 -3539 2607 2244 936 178 54 132 chr2 186613679 186613999 -64073855 - LTR41 LTR ERVL -10 763 471 1986 133 10 10 chr2 186613999 186614317 -64073537 + AluSx SINE Alu 1 312 0 936 178 54 132 chr2 186614317 186614345 -64073509 - LTR41 LTR ERVL -302 471 442 226 125 25 0 chr2 186614484 186614524 -64073330 - Alu SINE Alu -262 41 1 232 283 19 0 chr2 186614534 186614587 -64073267 - MER5A DNA MER1_type -135 54 1 1228 208 94 22 chr2 186614595 186614913 -64072941 - MER58B DNA MER1_type 0 341 1 2336 77 3 13 chr2 186614957 186615270 -64072584 + AluSg SINE Alu 1 310 0 2131 148 0 3 chr2 186615321 186615625 -64072229 + AluJo SINE Alu 1 303 -9 717 229 67 76 chr2 186615784 186616099 -64071755 - L1MC4a LINE L1 -1925 5883 5572 32 43 0 0 chr2 186619149 186619195 -64068659 + AT_rich Low_complexity Low_complexity 1 46 0 1977 95 0 0 chr2 186619579 186619822 -64068032 + AluSx SINE Alu 56 298 -14 26 64 0 0 chr2 186620045 186620092 -64067762 + AT_rich Low_complexity Low_complexity 1 47 0 23 33 0 0 chr2 186620193 186620223 -64067631 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr2 186623063 186623094 -64064760 + AT_rich Low_complexity Low_complexity 1 31 0 255 188 0 0 chr2 186623232 186623280 -64064574 + L2 LINE L2 3261 3308 -5 2148 93 0 33 chr2 186623287 186623589 -64064265 + AluSx SINE Alu 1 292 -20 2046 144 0 3 chr2 186623692 186623990 -64063864 - AluJb SINE Alu -15 297 1 494 237 132 0 chr2 186624596 186624748 -64063106 - MIR SINE MIR -1 261 90 21 0 0 0 chr2 186624856 186624877 -64062977 + AT_rich Low_complexity Low_complexity 1 21 0 1801 171 0 10 chr2 186625234 186625527 -64062327 - AluJb SINE Alu -9 303 14 339 239 0 0 chr2 186625588 186625718 -64062136 + (TA)n Simple_repeat Simple_repeat 2 131 0 2264 78 3 11 chr2 186630500 186630817 -64057037 + AluSc SINE Alu 1 315 0 240 182 55 0 chr2 186632483 186632538 -64055316 - MIR3 SINE MIR -18 190 133 485 264 50 35 chr2 186632694 186632895 -64054959 + L2 LINE L2 3109 3312 -1 219 313 88 14 chr2 186632957 186633104 -64054750 - MIR SINE MIR -10 252 95 263 246 120 70 chr2 186633419 186633561 -64054293 + MIR SINE MIR 114 262 0 539 256 15 0 chr2 186634014 186634151 -64053703 + MIR SINE MIR 108 246 -16 1015 95 128 226 chr2 186634206 186634511 -64053343 - AluJo SINE Alu -16 296 22 352 255 69 29 chr2 186634596 186634698 -64053156 - MIR SINE MIR -84 124 19 623 188 23 39 chr2 186634817 186634945 -64052909 - FLAM_A SINE Alu -5 128 3 462 235 42 0 chr2 186635238 186635357 -64052497 - MER5A DNA MER1_type -5 184 61 625 125 27 9 chr2 186635364 186635476 -64052378 - AluSg/x SINE Alu 0 310 197 300 139 0 0 chr2 186635597 186635640 -64052214 - AluSg/x SINE Alu -75 227 185 446 168 71 53 chr2 186635659 186635772 -64052082 - L1M4 LINE L1 -5288 1254 1140 2723 210 29 71 chr2 186635774 186636343 -64051511 - L1M4 LINE L1 -5839 703 170 2386 110 0 0 chr2 186636343 186636651 -64051203 - AluSg SINE Alu -2 308 1 2723 210 29 71 chr2 186636651 186636814 -64051040 - L1M4 LINE L1 -6372 170 2 241 252 141 15 chr2 186637037 186637172 -64050682 - L1MEd LINE L1 -5020 1099 948 312 161 0 0 chr2 186637499 186637561 -64050293 + (TG)n Simple_repeat Simple_repeat 1 62 0 2247 123 3 0 chr2 186639089 186639399 -64048455 - AluSq SINE Alu -2 311 1 305 227 0 30 chr2 186639406 186639472 -64048382 - MER5B DNA MER1_type -2 176 113 750 239 52 14 chr2 186639473 186639686 -64048168 + L1ME1 LINE L1 5942 6162 -4 369 240 73 21 chr2 186639686 186639782 -64048072 + MER5B DNA MER1_type 45 145 -33 744 172 69 40 chr2 186640067 186640241 -64047613 + MER96B DNA MER1_type? 1 179 -238 739 231 35 12 chr2 186640689 186640862 -64046992 - MER69A DNA AcHobo 0 177 1 2108 85 42 7 chr2 186640973 186641256 -64046598 - AluY SINE Alu -18 293 1 414 291 128 18 chr2 186641306 186641533 -64046321 + MIR SINE MIR 6 257 -5 633 274 65 23 chr2 186641534 186641749 -64046105 - LTR67 LTR ERVL 0 557 334 200 370 120 0 chr2 186642514 186642614 -64045240 + L2 LINE L2 3158 3269 -3 230 335 58 97 chr2 186642774 186643052 -64044802 - L2 LINE L2 -1 3271 3005 217 214 0 0 chr2 186643144 186643186 -64044668 + L2 LINE L2 3210 3251 -21 3019 121 6 20 chr2 186643748 186644106 -64043748 + L1PB4 LINE L1 5379 5741 -415 1816 191 3 0 chr2 186644106 186644405 -64043449 + AluJo SINE Alu 1 300 -12 2529 73 0 0 chr2 186644407 186644708 -64043146 + AluY SINE Alu 1 301 -10 3019 121 6 20 chr2 186644708 186644835 -64043019 + L1PB4 LINE L1 5742 5860 -296 1028 250 175 34 chr2 186645028 186645159 -64042695 + L2 LINE L2 2167 2278 -1036 2255 108 3 19 chr2 186645159 186645473 -64042381 - AluSx SINE Alu -3 309 1 1028 250 175 34 chr2 186645473 186645837 -64042017 + L2 LINE L2 2278 2732 -582 680 289 50 57 chr2 186645843 186646244 -64041610 + L2 LINE L2 2916 3313 0 535 299 188 20 chr2 186646724 186647387 -64040467 - L2 LINE L2 -182 3090 2327 2235 107 7 3 chr2 186647394 186647702 -64040152 + AluSx SINE Alu 1 309 -3 343 224 0 0 chr2 186647729 186647796 -64040058 - MLT1A1 LTR MaLR 0 365 299 2133 136 3 3 chr2 186647911 186648219 -64039635 - AluSx SINE Alu -4 308 1 384 67 0 0 chr2 186648880 186648925 -64038929 + LTR7 LTR ERV1 406 450 0 1671 94 58 0 chr2 186649131 186649354 -64038500 - THE1A LTR MaLR -119 236 1 2168 116 0 17 chr2 186649830 186650132 -64037722 + AluSq SINE Alu 3 299 -14 370 159 9 212 chr2 186650421 186650534 -64037320 - MER2 DNA MER2_type -246 99 10 1720 136 30 3 chr2 186650545 186650840 -64037014 + L1MB5 LINE L1 5677 5979 -195 258 200 108 58 chr2 186650843 186650963 -64036891 + MER52A LTR ERV1 1 126 -1629 6549 197 77 40 chr2 186651247 186652763 -64035091 + MER52A LTR ERV1 169 1740 -15 969 145 62 6 chr2 186652795 186652974 -64034880 + L1MB5 LINE L1 5986 6174 0 2467 178 11 113 chr2 186653068 186654117 -64033737 + L1MB1 LINE L1 4675 5567 -743 544 145 0 0 chr2 186654117 186654200 -64033654 + FLAM_A SINE Alu 45 127 -15 3269 176 13 7 chr2 186654200 186654814 -64033040 + L1MB1 LINE L1 5550 6167 -1 394 250 83 9 chr2 186655041 186655149 -64032705 + L2 LINE L2 3190 3305 -8 2046 186 49 22 chr2 186656218 186656665 -64031189 + MLT1C LTR MaLR 1 459 -8 2051 119 0 77 chr2 186656680 186657016 -64030838 - AluSg SINE Alu 0 310 1 1214 220 108 32 chr2 186657199 186657599 -64030255 + L1MC4 LINE L1 6745 7174 -868 280 163 0 0 chr2 186657681 186657730 -64030124 + MER2 DNA MER2_type 297 345 0 230 228 10 99 chr2 186657770 186657871 -64029983 - MIR SINE MIR -97 111 20 1406 155 51 28 chr2 186657934 186658381 -64029473 - MER1B DNA MER1_type 0 329 30 443 249 127 26 chr2 186659247 186659792 -64028062 + L1MC5 LINE L1 7164 7689 -272 373 261 11 5 chr2 186659856 186659961 -64027893 + L1MC4 LINE L1 7883 8033 -9 346 283 9 9 chr2 186660411 186660517 -64027337 + MIR3 SINE MIR 90 195 -13 1861 68 0 0 chr2 186661270 186661504 -64026350 - L1PA8 LINE L1 0 6172 5939 2189 90 4 0 chr2 186661542 186661820 -64026034 - AluY SINE Alu -32 279 1 6584 124 8 7 chr2 186662009 186663628 -64024226 + L1PB1 LINE L1 4534 6149 -2 356 299 84 24 chr2 186663902 186664069 -64023785 + L2 LINE L2 3131 3307 -6 744 207 43 0 chr2 186664395 186664535 -64023319 + FRAM SINE Alu 1 146 -30 2334 61 0 31 chr2 186664557 186664851 -64023003 + AluY SINE Alu 1 285 -26 3460 117 82 16 chr2 186665931 186666489 -64021365 + LTR49 LTR ERV1 1 595 0 813 198 25 11 chr2 186667095 186667268 -64020586 - MIR SINE MIR -63 145 26 189 0 0 0 chr2 186668688 186668709 -64019145 + (A)n Simple_repeat Simple_repeat 1 21 0 198 0 0 0 chr2 186669010 186669032 -64018822 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 2339 106 0 10 chr2 186670233 186670544 -64017310 + AluY SINE Alu 1 308 -3 388 299 14 7 chr2 186670578 186670725 -64017129 + L1MC4a LINE L1 5793 5940 -1868 1332 156 9 18 chr2 186670730 186670955 -64016899 + AluSg/x SINE Alu 82 304 -6 2209 100 14 0 chr2 186670960 186671250 -64016604 + AluSx SINE Alu 1 294 -18 376 283 232 12 chr2 186671304 186671640 -64016214 - L2 LINE L2 0 3313 2904 195 69 0 0 chr2 186671718 186671747 -64016107 + (A)n Simple_repeat Simple_repeat 1 29 0 2230 108 20 3 chr2 186671956 186672252 -64015602 + AluSq SINE Alu 1 301 -12 2366 93 39 3 chr2 186672252 186672584 -64015270 - Tigger1 DNA MER2_type -610 1808 1465 757 181 0 0 chr2 186672594 186672721 -64015133 - FLAM_A SINE Alu -6 127 1 1630 195 20 3 chr2 186672748 186673046 -64014808 + AluJo SINE Alu 2 304 -8 840 182 19 13 chr2 186673046 186673200 -64014654 + AluJo/FRAM SINE Alu 134 288 -24 7663 103 33 45 chr2 186673208 186674194 -64013660 - Tigger1 DNA MER2_type -953 1465 468 1831 151 10 24 chr2 186674194 186674486 -64013368 + AluJb SINE Alu 7 294 -18 7663 103 33 45 chr2 186674486 186674568 -64013286 - Tigger1 DNA MER2_type -1950 468 387 4995 98 21 1 chr2 186674568 186675245 -64012609 - L1PA14 LINE L1 -4 6157 5468 7663 103 33 45 chr2 186675245 186675645 -64012209 - Tigger1 DNA MER2_type -2031 387 1 1361 165 114 0 chr2 186675715 186675970 -64011884 - MER58B DNA MER1_type -2 339 56 2009 143 10 19 chr2 186676028 186676342 -64011512 + AluSx SINE Alu 1 311 -1 730 71 10 0 chr2 186676530 186676629 -64011225 - L1PA14 LINE L1 -64 6097 5998 549 319 53 0 chr2 186676725 186676894 -64010960 - MIR3 SINE MIR -29 179 2 799 190 8 0 chr2 186677001 186677122 -64010732 + FLAM_C SINE Alu 2 123 -20 2311 179 75 22 chr2 186677334 186677827 -64010027 + Charlie1b DNA MER1_type 1 519 -4 484 236 54 128 chr2 186678052 186678242 -64009612 + L1MC5 LINE L1 7464 7666 -295 818 149 35 0 chr2 186678242 186678356 -64009498 + FLAM_C SINE Alu 1 118 -15 484 236 54 128 chr2 186678356 186678559 -64009295 + L1MC5 LINE L1 7666 7818 -143 2027 155 0 3 chr2 186678559 186678862 -64008992 + AluJb SINE Alu 1 302 -10 484 236 54 128 chr2 186678862 186678945 -64008909 + L1MC5 LINE L1 7818 7906 -55 1084 231 132 3 chr2 186679540 186679845 -64008009 + L1ME3A LINE L1 5524 5866 -304 2257 112 0 0 chr2 186679854 186680148 -64007706 + AluSx SINE Alu 1 294 -18 240 287 8 131 chr2 186680173 186680410 -64007444 + L1ME3A LINE L1 5962 6169 -1 290 276 140 35 chr2 186681487 186681638 -64006216 - MIR SINE MIR -61 147 17 391 336 9 9 chr2 186681676 186681792 -64006062 + MIR SINE MIR 13 128 -134 231 365 0 12 chr2 186681865 186681950 -64005904 - MER5A DNA MER1_type -5 184 101 288 0 0 0 chr2 186681978 186682010 -64005844 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 1501 183 29 7 chr2 186682010 186682284 -64005570 - AluJb SINE Alu -32 280 1 469 275 118 14 chr2 186682498 186682709 -64005145 + MER112 DNA MER1_type 3 235 -25 2639 243 63 84 chr2 186682709 186682837 -64005017 + L1M4b LINE L1 1441 1570 -5568 1738 189 3 6 chr2 186682837 186683150 -64004704 + AluJo SINE Alu 1 312 0 2639 243 63 84 chr2 186683150 186683230 -64004624 + L1M4b LINE L1 1570 1650 -5488 1596 188 39 0 chr2 186683230 186683512 -64004342 + AluJo SINE Alu 1 293 -19 2279 130 0 0 chr2 186683516 186683824 -64004030 + AluSp SINE Alu 1 308 -5 2639 243 63 84 chr2 186683824 186684532 -64003322 + L1M4b LINE L1 1653 2374 -4764 1638 173 20 33 chr2 186684532 186684838 -64003016 + AluJo SINE Alu 1 302 -10 2639 243 63 84 chr2 186684838 186685001 -64002853 + L1M4b LINE L1 2374 2539 -4599 959 264 46 9 chr2 186685001 186685217 -64002637 - MER58A DNA MER1_type 0 224 1 2639 243 63 84 chr2 186685217 186685370 -64002484 + L1M4b LINE L1 2539 2694 -4444 2442 61 0 3 chr2 186685370 186685664 -64002190 + AluY SINE Alu 1 293 -18 2639 243 63 84 chr2 186685664 186685708 -64002146 + L1M4b LINE L1 2694 2737 -4401 1199 240 3 68 chr2 186685708 186686029 -64001825 + AluJo SINE Alu 1 300 -2 2639 243 63 84 chr2 186686029 186686255 -64001599 + L1M4b LINE L1 2737 3096 -4042 1210 201 84 8 chr2 186686255 186686504 -64001350 + LTR41 LTR ERVL 1 268 -505 1515 37 91 5 chr2 186686638 186686825 -64001029 + AluY SINE Alu 1 203 -108 198 0 0 0 chr2 186687249 186687271 -64000583 + (A)n Simple_repeat Simple_repeat 1 22 0 1055 90 0 0 chr2 186687271 186687404 -64000450 + THE1A LTR MaLR 223 355 0 12798 79 9 6 chr2 186687404 186688978 -63998876 + THE1A-int LTR MaLR 1 1580 0 3009 73 0 0 chr2 186688978 186689333 -63998521 + THE1A LTR MaLR 1 355 0 763 191 13 7 chr2 186689590 186689742 -63998112 - MER103 DNA DNA -2 164 12 1258 250 135 24 chr2 186689743 186690197 -63997657 + MLT1D LTR MaLR 1 592 -1 803 143 0 0 chr2 186690595 186690714 -63997140 + FLAM_C SINE Alu 1 119 -24 2222 118 0 0 chr2 186691889 186692185 -63995669 - AluSx SINE Alu -16 296 1 36 0 0 0 chr2 186693313 186693349 -63994505 + AT_rich Low_complexity Low_complexity 1 36 0 1009 288 72 34 chr2 186693706 186694261 -63993593 - L1MC4a LINE L1 -1934 5874 5299 2128 139 0 3 chr2 186694435 186694745 -63993109 - AluJo SINE Alu -3 309 1 24 0 0 0 chr2 186695119 186695143 -63992711 + AT_rich Low_complexity Low_complexity 1 24 0 5207 166 20 37 chr2 186695154 186695388 -63992466 - L1MA9 LINE L1 -38 6274 6038 1592 164 52 4 chr2 186695388 186695657 -63992197 - AluJo SINE Alu -16 296 15 5207 166 20 37 chr2 186695657 186696228 -63991626 - L1MA9 LINE L1 -274 6038 5483 2003 152 0 3 chr2 186696228 186696524 -63991330 - AluSx SINE Alu -17 295 1 5207 166 20 37 chr2 186696524 186696757 -63991097 - L1MA9 LINE L1 -829 5483 5248 1025 165 24 0 chr2 186696897 186697067 -63990787 - AluJb SINE Alu -19 293 120 982 272 145 58 chr2 186697515 186698052 -63989802 - MLT1K LTR MaLR -3 585 2 229 273 75 72 chr2 186698377 186698725 -63989129 - L1ME4a LINE L1 -44 6077 5729 198 0 0 0 chr2 186699111 186699133 -63988721 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 918 138 15 92 chr2 186699135 186699330 -63988524 - AluSg/x SINE Alu -19 291 112 804 144 0 0 chr2 186699574 186699692 -63988162 - AluJb SINE Alu -194 118 1 2225 99 3 22 chr2 186700180 186700493 -63987361 - AluSx SINE Alu -5 307 1 232 194 13 181 chr2 186700603 186700758 -63987096 + L2 LINE L2 3143 3271 -1 628 187 84 0 chr2 186700910 186701063 -63986791 + FLAM_A SINE Alu 1 162 0 23 54 0 0 chr2 186702056 186702093 -63985761 + AT_rich Low_complexity Low_complexity 1 37 0 1683 133 25 73 chr2 186702146 186702461 -63985393 - AluJb SINE Alu -12 300 1 4789 140 43 56 chr2 186702670 186703527 -63984327 - L1MB3 LINE L1 0 6183 5337 1827 174 3 0 chr2 186703527 186703820 -63984034 - AluJo SINE Alu -18 294 1 4789 140 43 56 chr2 186703820 186703855 -63983999 - L1MB3 LINE L1 -846 5337 5303 6247 111 19 3 chr2 186704404 186705357 -63982497 - L1PA16 LINE L1 -10 6156 5166 183 42 0 0 chr2 186705357 186705381 -63982473 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6247 111 19 3 chr2 186705381 186705865 -63981989 - L1PA16 LINE L1 -1000 5166 4691 2994 180 40 21 chr2 186705865 186705887 -63981967 - L1MB3 LINE L1 -816 5330 5310 219 69 0 0 chr2 186705887 186705916 -63981938 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2994 180 40 21 chr2 186705916 186706571 -63981283 - L1MB3 LINE L1 -836 5310 4640 349 187 13 13 chr2 186706573 186706648 -63981206 - L1MCa LINE L1 -4756 1670 1596 194 0 0 37 chr2 186706649 186706676 -63981178 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 45640 33 1 1 chr2 186706676 186712815 -63975039 - L1PA3 LINE L1 -10 6145 9 2430 197 56 14 chr2 186712822 186713380 -63974474 - L1MCa LINE L1 -4788 1640 1060 1155 115 6 0 chr2 186713501 186713657 -63974197 - AluSx SINE Alu -150 162 6 456 91 0 0 chr2 186713680 186713746 -63974108 + (TTCC)n Simple_repeat Simple_repeat 3 68 0 1711 191 26 0 chr2 186713756 186714060 -63973794 - AluJo SINE Alu 0 312 1 281 258 76 26 chr2 186714564 186714710 -63973144 + MIR SINE MIR 16 164 -62 183 80 0 0 chr2 186718237 186718262 -63969592 + (GAA)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr2 186722612 186722633 -63965221 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr2 186724615 186724646 -63963208 + AT_rich Low_complexity Low_complexity 1 31 0 215 194 0 0 chr2 186727281 186727317 -63960537 + (TG)n Simple_repeat Simple_repeat 2 37 0 230 263 0 40 chr2 186729498 186729574 -63958280 + G-rich Low_complexity Low_complexity 3 75 0 257 187 33 11 chr2 186730856 186730947 -63956907 + GA-rich Low_complexity Low_complexity 6 98 0 21 0 0 0 chr2 186731027 186731048 -63956806 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 186733910 186733935 -63953919 + AT_rich Low_complexity Low_complexity 1 25 0 249 108 0 0 chr2 186734221 186734258 -63953596 + (TTA)n Simple_repeat Simple_repeat 2 38 0 251 260 7 7 chr2 186738287 186738382 -63949472 + A-rich Low_complexity Low_complexity 1 95 0 26 74 0 0 chr2 186739716 186739770 -63948084 + GC_rich Low_complexity Low_complexity 1 54 0 216 111 0 0 chr2 186742416 186742452 -63945402 + (A)n Simple_repeat Simple_repeat 1 36 0 552 262 109 11 chr2 186743052 186743235 -63944619 - MIR SINE MIR -3 259 59 298 316 6 6 chr2 186743518 186743695 -63944159 + (TG)n Simple_repeat Simple_repeat 1 177 0 25 31 0 0 chr2 186743973 186744005 -63943849 + GC_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr2 186747146 186747174 -63940680 + GC_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 186747251 186747274 -63940580 + (CTG)n Simple_repeat Simple_repeat 3 25 0 23 33 0 0 chr2 186747276 186747306 -63940548 + GC_rich Low_complexity Low_complexity 1 30 0 216 218 11 58 chr2 186747633 186747720 -63940134 + G-rich Low_complexity Low_complexity 6 88 0 2030 78 4 0 chr2 186749394 186749649 -63938205 - AluSg SINE Alu -5 305 50 709 128 0 78 chr2 186749772 186749913 -63937941 + AluSg/x SINE Alu 177 306 -6 207 237 0 53 chr2 186750132 186750208 -63937646 + GA-rich Low_complexity Low_complexity 1 72 0 183 200 67 0 chr2 186750758 186750803 -63937051 - MIR SINE MIR -63 145 98 1898 96 23 82 chr2 186751809 186752136 -63935718 - AluSp SINE Alu 0 309 1 1936 133 7 27 chr2 186752138 186752439 -63935415 - AluJo SINE Alu -17 295 1 269 326 171 17 chr2 186752570 186752745 -63935109 - MIR SINE MIR -22 240 39 1497 80 21 42 chr2 186753686 186753923 -63933931 + L1PA10 LINE L1 5937 6168 0 381 22 0 0 chr2 186754296 186754342 -63933512 + (CA)n Simple_repeat Simple_repeat 2 47 0 232 371 0 0 chr2 186754543 186754640 -63933214 + MIR SINE MIR 81 177 -85 1199 129 6 0 chr2 186755258 186755470 -63932384 - AluSq SINE Alu 0 313 135 609 228 92 43 chr2 186755570 186755622 -63932232 - MLT1A1 LTR MaLR -172 193 145 2026 133 7 13 chr2 186755622 186755922 -63931932 - AluSq SINE Alu -15 298 1 609 228 92 43 chr2 186755922 186756053 -63931801 - MLT1A1 LTR MaLR -220 145 1 294 277 0 108 chr2 186756384 186756457 -63931397 + L2 LINE L2 2932 2987 -326 2145 116 44 0 chr2 186756457 186756750 -63931104 - AluSx SINE Alu -6 306 1 294 277 0 108 chr2 186756750 186756806 -63931048 + L2 LINE L2 2987 3047 -266 198 376 163 6 chr2 186757664 186757842 -63930012 + L3b LINE CR1 1328 1533 -50 686 222 36 80 chr2 186759009 186759100 -63928754 + MLT1G3 LTR MaLR 6 99 -431 2178 133 0 3 chr2 186759100 186759401 -63928453 - AluSx SINE Alu -12 300 1 686 222 36 80 chr2 186759401 186759584 -63928270 + MLT1G3 LTR MaLR 99 268 -262 247 254 0 28 chr2 186759587 186759658 -63928196 + MLT1L LTR MaLR 431 499 -116 * 254 279 19 19 chr2 186759653 186759757 -63928097 + MLT1K LTR MaLR 485 588 0 207 0 0 0 chr2 186760118 186760141 -63927713 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2276 167 47 0 chr2 186760466 186760873 -63926981 - MSTB LTR MaLR 0 426 1 189 305 162 0 chr2 186761285 186761390 -63926464 + MIR SINE MIR 23 144 -64 225 0 0 0 chr2 186761986 186762011 -63925843 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 339 183 17 0 chr2 186763168 186763228 -63924626 - MER5A DNA MER1_type 0 189 129 838 216 27 5 chr2 186763260 186763445 -63924409 - MER5A DNA MER1_type 0 189 1 340 227 18 0 chr2 186763672 186763782 -63924072 + (TA)n Simple_repeat Simple_repeat 2 113 0 266 292 34 11 chr2 186764123 186764212 -63923642 - MIR3 SINE MIR -6 202 112 443 267 0 0 chr2 186764982 186765087 -63922767 + LTR33A LTR ERVL 419 523 0 366 316 58 7 chr2 186765094 186765233 -63922621 - MIR SINE MIR -109 153 8 253 114 91 0 chr2 186765677 186765721 -63922133 - MLT2D LTR ERVL 0 414 367 207 162 0 0 chr2 186765731 186765768 -63922086 + (TG)n Simple_repeat Simple_repeat 1 37 0 1356 219 124 45 chr2 186765768 186766188 -63921666 - MLT2B1 LTR ERVL -67 453 1 798 197 67 6 chr2 186766395 186766573 -63921281 + MER5A DNA MER1_type 1 189 0 667 227 0 0 chr2 186766671 186766803 -63921051 - FLAM_A SINE Alu -1 132 1 26 50 0 0 chr2 186767305 186767345 -63920509 + AT_rich Low_complexity Low_complexity 1 40 0 3940 170 67 35 chr2 186767541 186767882 -63919972 - L1MB7 LINE L1 -1 6183 5854 2058 133 10 3 chr2 186767882 186768176 -63919678 - AluSx SINE Alu -16 296 1 3940 170 67 35 chr2 186768176 186768893 -63918961 - L1MB7 LINE L1 -330 5854 5088 620 255 49 16 chr2 186768920 186769104 -63918750 - MLT1I LTR MaLR -217 192 3 2026 115 0 7 chr2 186769975 186770244 -63917610 + AluSx SINE Alu 1 267 -45 300 217 206 0 chr2 186770270 186770362 -63917492 - MIR SINE MIR -48 214 104 362 194 45 0 chr2 186770374 186770441 -63917413 - MER81 DNA DNA -41 73 4 2094 95 8 56 chr2 186771200 186771498 -63916356 + L1PB1 LINE L1 5811 6091 -60 2295 117 16 0 chr2 186771498 186771805 -63916049 + AluSx SINE Alu 1 312 0 2094 95 8 56 chr2 186771805 186771863 -63915991 + L1PB1 LINE L1 6091 6150 -1 2154 148 0 7 chr2 186772129 186772439 -63915415 + AluJo SINE Alu 5 312 0 2367 100 0 7 chr2 186773139 186773449 -63914405 + AluSg SINE Alu 1 308 -2 1944 171 0 7 chr2 186773800 186774109 -63913745 - AluJb SINE Alu -5 307 1 794 178 345 36 chr2 186774960 186775450 -63912404 + MLT1E1 LTR MaLR 1 623 -1 1593 121 9 0 chr2 186775933 186776157 -63911697 - AluSg/x SINE Alu -12 298 73 22 35 0 0 chr2 186976270 186976299 -63711555 + AT_rich Low_complexity Low_complexity 1 29 0 288 0 0 0 chr2 186977406 186977438 -63710416 + (TG)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr2 186979054 186979077 -63708777 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr2 186979460 186979494 -63708360 + AT_rich Low_complexity Low_complexity 1 34 0 550 298 72 37 chr2 186979854 186980544 -63707310 - L1ME3A LINE L1 -334 5836 5123 538 100 0 0 chr2 186980614 186980694 -63707160 + L1PA5 LINE L1 6067 6146 -8 207 0 0 0 chr2 186980698 186980721 -63707133 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 28 48 0 0 chr2 186980736 186980778 -63707076 + AT_rich Low_complexity Low_complexity 1 42 0 41 21 0 0 chr2 186981051 186981099 -63706755 + AT_rich Low_complexity Low_complexity 1 48 0 214 132 38 0 chr2 186981284 186981337 -63706517 + (TA)n Simple_repeat Simple_repeat 2 56 0 1844 151 10 14 chr2 186981366 186981658 -63706196 - AluSx SINE Alu -20 292 2 267 31 0 0 chr2 186981667 186981699 -63706155 + (TG)n Simple_repeat Simple_repeat 1 32 0 1766 112 18 25 chr2 186981801 186982079 -63705775 - AluSq SINE Alu -37 276 1 360 318 66 41 chr2 186982087 186982450 -63705404 - L1MEd LINE L1 -1133 1357 888 233 271 176 12 chr2 186983168 186983253 -63704601 + MIR SINE MIR 157 255 -7 1054 286 42 18 chr2 186984166 186984600 -63703254 - L1ME1 LINE L1 -8 6158 5715 4551 207 125 44 chr2 186984606 186984735 -63703119 - L1P5 LINE L1 -691 5460 5343 2252 121 55 6 chr2 186984735 186985082 -63702772 + THE1B LTR MaLR 1 364 0 4551 207 125 44 chr2 186985082 186986467 -63701387 - L1P5 LINE L1 -808 5343 3784 245 29 0 29 chr2 186986469 186986504 -63701350 + (TA)n Simple_repeat Simple_repeat 1 34 0 1440 186 21 10 chr2 186987527 186987817 -63700037 + MLT2D LTR ERVL 1 293 -121 228 35 0 0 chr2 186987843 186987872 -63699982 + (TG)n Simple_repeat Simple_repeat 2 30 0 244 254 14 0 chr2 186987874 186987945 -63699909 + (TA)n Simple_repeat Simple_repeat 2 73 0 22 0 0 0 chr2 186988227 186988249 -63699605 + AT_rich Low_complexity Low_complexity 1 22 0 227 209 0 0 chr2 186988271 186988314 -63699540 - MER103 DNA DNA -91 75 33 624 249 72 55 chr2 186988469 186988757 -63699097 - MLT1B LTR MaLR -73 301 1 182 61 0 61 chr2 186989097 186989130 -63698724 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 905 178 13 6 chr2 186989494 186989651 -63698203 + MER5A DNA MER1_type 7 164 -25 216 0 0 0 chr2 186989885 186989909 -63697945 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1932 119 44 12 chr2 186990451 186990795 -63697059 + L1P4 LINE L1 5267 5621 -545 4454 171 15 49 chr2 186990802 186991749 -63696105 + L1MB1 LINE L1 5254 6168 0 521 225 100 38 chr2 186991834 186992074 -63695780 + L1MEc LINE L1 1668 1922 -4474 1067 139 143 0 chr2 186992280 186992317 -63695537 - L1MA8 LINE L1 -22 6269 6239 198 0 0 0 chr2 186992317 186992339 -63695515 + (TA)n Simple_repeat Simple_repeat 1 22 0 1067 139 143 0 chr2 186992339 186992531 -63695323 - L1MA8 LINE L1 -52 6239 6007 1603 155 115 33 chr2 186992582 186993007 -63694847 - pTR5 LTR ERV1 -1238 1200 741 862 282 36 17 chr2 186994080 186994381 -63693473 + L1MD2 LINE L1 6030 6336 -23 767 188 7 7 chr2 186994881 186995035 -63692819 - FRAM SINE Alu -23 153 1 1161 141 10 35 chr2 186995185 186995384 -63692470 - THE1B LTR MaLR 0 364 171 32 0 0 0 chr2 186995384 186995416 -63692438 + AT_rich Low_complexity Low_complexity 1 32 0 1018 61 8 0 chr2 186995417 186995548 -63692306 - AluY SINE Alu -179 132 1 1699 101 24 8 chr2 186995576 186995823 -63692031 + AluSp SINE Alu 30 280 -33 234 62 0 0 chr2 186995823 186995855 -63691999 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 886 99 126 13 chr2 186995859 186996010 -63691844 - THE1B LTR MaLR -196 168 1 740 85 38 0 chr2 186996124 186996230 -63691624 + L1PA7 LINE L1 6044 6153 -1 182 37 37 0 chr2 186996490 186996517 -63691337 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 6647 65 23 0 chr2 186996521 186997650 -63690204 - L1PA7 LINE L1 -13 6141 5002 7421 106 4 13 chr2 186997650 186998744 -63689110 + L1PA7 LINE L1 3902 4985 -1161 26 30 0 0 chr2 187000517 187000550 -63687304 + AT_rich Low_complexity Low_complexity 1 33 0 286 172 62 31 chr2 187001075 187001139 -63686715 - LTR33 LTR ERVL 0 521 456 644 308 5 10 chr2 187001423 187001631 -63686223 + LTR37B LTR ERV1 9 215 -253 395 294 63 8 chr2 187001760 187001886 -63685968 - LTR33 LTR ERVL -382 139 7 39 74 0 0 chr2 187002053 187002134 -63685720 + AT_rich Low_complexity Low_complexity 1 81 0 23 33 0 0 chr2 187002653 187002683 -63685171 + AT_rich Low_complexity Low_complexity 1 30 0 248 179 26 51 chr2 187003047 187003125 -63684729 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 325 313 101 44 chr2 187003876 187004292 -63683562 + L1ME1 LINE L1 5208 5644 -526 1171 279 90 69 chr2 187004484 187006265 -63681589 + L1ME3A LINE L1 4349 6163 -7 1451 154 84 11 chr2 187006294 187006567 -63681287 + L1M3 LINE L1 5516 5808 -375 24 32 0 0 chr2 187006907 187006938 -63680916 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 187008463 187008484 -63679370 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr2 187008699 187008719 -63679135 + (T)n Simple_repeat Simple_repeat 1 20 0 24 0 0 0 chr2 187010224 187010248 -63677606 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 187011863 187011887 -63675967 + AT_rich Low_complexity Low_complexity 1 24 0 2297 52 42 0 chr2 187013306 187013595 -63674259 - AluY SINE Alu -10 301 1 234 363 0 0 chr2 187014850 187014930 -63672924 + LTR33 LTR ERVL 101 180 -341 1759 158 6 31 chr2 187016055 187016372 -63671482 + AluSx SINE Alu 1 309 -3 210 254 0 0 chr2 187016826 187016885 -63670969 + A-rich Low_complexity Low_complexity 1 59 0 225 0 0 0 chr2 187019145 187019170 -63668684 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2014 107 7 0 chr2 187019173 187019453 -63668401 - AluSp SINE Alu -30 283 2 1103 241 119 4 chr2 187019483 187019761 -63668093 + MLT1E LTR MaLR 284 593 0 * 1203 193 49 46 chr2 187019761 187020054 -63667800 + Charlie1 DNA MER1_type 1906 2199 -562 2098 215 68 31 chr2 187020262 187020847 -63667007 - L1MD2 LINE L1 -63 6296 5690 3161 145 9 2 chr2 187021467 187022011 -63665843 + L1MA4 LINE L1 5750 6297 -3 1117 222 124 58 chr2 187022659 187023109 -63664745 + L1ME1 LINE L1 5682 6161 -5 23 0 0 0 chr2 187023109 187023132 -63664722 + AT_rich Low_complexity Low_complexity 1 23 0 328 314 98 26 chr2 187023443 187023637 -63664217 - MLT1L LTR MaLR -54 561 354 842 320 30 43 chr2 187024164 187024630 -63663224 + LTR16B LTR ERVL 5 464 0 310 137 61 61 chr2 187024850 187024981 -63662873 + (TTAA)n Simple_repeat Simple_repeat 3 133 0 68 69 0 0 chr2 187024995 187025126 -63662728 + AT_rich Low_complexity Low_complexity 1 131 0 229 240 0 62 chr2 187025178 187025274 -63662580 + L1MC4 LINE L1 6614 6703 -1339 353 224 8 30 chr2 187025288 187025422 -63662432 + (CATA)n Simple_repeat Simple_repeat 2 132 0 1390 310 66 40 chr2 187025425 187026547 -63661307 - L2 LINE L2 -13 3300 2136 620 316 108 10 chr2 187026576 187026864 -63660990 - L2 LINE L2 -1429 1885 1570 381 347 81 5 chr2 187027099 187027321 -63660533 + LTR16C LTR ERVL 227 465 -26 860 300 60 3 chr2 187027355 187027638 -63660216 - L2 LINE L2 -1772 1542 1244 223 233 50 0 chr2 187028879 187028939 -63658915 + GA-rich Low_complexity Low_complexity 4 66 0 303 184 114 112 chr2 187029577 187029705 -63658149 - FLAM SINE Alu 0 133 40 1905 148 0 23 chr2 187029781 187030111 -63657743 + AluSx SINE Alu 3 312 0 848 210 9 46 chr2 187030241 187030460 -63657394 + MER20 DNA MER1_type 5 215 -4 1217 183 21 38 chr2 187033130 187033370 -63654484 + THE1B LTR MaLR 2 237 -127 212 362 91 14 chr2 187033477 187033753 -63654101 + L2 LINE L2 745 1041 -2273 209 173 39 0 chr2 187034541 187034593 -63653261 + (TA)n Simple_repeat Simple_repeat 1 54 0 25 31 0 0 chr2 187035387 187035419 -63652435 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 187035472 187035493 -63652361 + AT_rich Low_complexity Low_complexity 1 21 0 1861 238 126 31 chr2 187035551 187036323 -63651531 - L1MC4 LINE L1 -15 8027 7183 907 249 78 9 chr2 187036321 187036642 -63651212 + L1MC4 LINE L1 6827 7169 -873 * 352 367 28 73 chr2 187037697 187037945 -63649909 + L2 LINE L2 2837 3073 -199 204 323 0 0 chr2 187038096 187038158 -63649696 + L2 LINE L2 3206 3267 -5 273 284 51 32 chr2 187039642 187039807 -63648047 - MIR SINE MIR -45 217 50 187 322 105 35 chr2 187041107 187041278 -63646576 - L2 LINE L2 -977 2337 2155 1801 159 7 10 chr2 187041333 187041635 -63646219 - AluJo SINE Alu 0 312 12 25 51 0 0 chr2 187043213 187043252 -63644602 + AT_rich Low_complexity Low_complexity 1 39 0 348 253 33 22 chr2 187043749 187043840 -63644014 + L2 LINE L2 3222 3313 0 392 231 149 8 chr2 187044725 187044846 -63643008 + MIR SINE MIR 112 249 -13 748 200 7 0 chr2 187044876 187045021 -63642833 - Tigger7 DNA MER2_type 0 2491 2346 * 1690 177 71 19 chr2 187045019 187045341 -63642513 - Tigger7 DNA MER2_type -389 344 6 206 341 58 17 chr2 187046292 187046465 -63641389 + MIR SINE MIR 68 247 -15 195 161 54 0 chr2 187047454 187047510 -63640344 + (TA)n Simple_repeat Simple_repeat 1 59 0 2461 121 56 97 chr2 187047744 187048281 -63639573 - Tigger3(Golem) DNA MER2_type 0 3029 2515 270 0 0 0 chr2 187048381 187048411 -63639443 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 679 22 22 0 chr2 187048410 187048499 -63639355 + (GA)n Simple_repeat Simple_repeat 2 92 0 1225 188 4 36 chr2 187048503 187048780 -63639074 - AluSx SINE Alu -44 268 1 3038 210 23 45 chr2 187048790 187049296 -63638558 - L1MEc LINE L1 -2368 3847 3368 2261 117 3 0 chr2 187049296 187049605 -63638249 - AluSx SINE Alu 0 312 3 3038 210 23 45 chr2 187049605 187050004 -63637850 - L1MEc LINE L1 -2847 3368 2962 * 19343 132 10 8 chr2 187049990 187051391 -63636463 - L1PA11 LINE L1 -2 6172 4776 2111 137 0 6 chr2 187051391 187051704 -63636150 - AluY SINE Alu 0 311 1 19343 132 10 8 chr2 187051704 187054363 -63633491 - L1PA11 LINE L1 -1398 4776 2110 3312 246 13 33 chr2 187054404 187054994 -63632860 - L1 LINE L1 -3233 2982 2405 2005 136 7 3 chr2 187054994 187055289 -63632565 + AluSx SINE Alu 1 296 -16 3312 246 13 33 chr2 187055289 187055893 -63631961 - L1 LINE L1 -3810 2405 1790 519 261 161 12 chr2 187055912 187056234 -63631620 - L1MEc LINE L1 -3210 3005 2636 585 248 52 30 chr2 187056269 187056583 -63631271 - L1MEc LINE L1 -3736 2479 2201 2570 209 50 29 chr2 187056590 187057429 -63630425 + MER73 LTR ERVL 1 644 0 396 322 115 31 chr2 187057429 187057528 -63630326 - L1MEc LINE L1 -4198 2198 2109 225 0 0 0 chr2 187057528 187057553 -63630301 + (TA)n Simple_repeat Simple_repeat 1 25 0 396 322 115 31 chr2 187057553 187057739 -63630115 - L1MEc LINE L1 -4287 2109 1889 25 31 0 0 chr2 187057908 187057940 -63629914 + AT_rich Low_complexity Low_complexity 1 32 0 240 35 0 0 chr2 187058105 187058134 -63629720 + (T)n Simple_repeat Simple_repeat 1 29 0 31 58 0 0 chr2 187059184 187059236 -63628618 + AT_rich Low_complexity Low_complexity 1 52 0 256 344 55 25 chr2 187059823 187059986 -63627868 + MIR SINE MIR 34 201 -61 2427 58 0 0 chr2 187060317 187060611 -63627243 + AluY SINE Alu 1 294 -17 294 29 0 0 chr2 187061046 187061081 -63626773 + (CA)n Simple_repeat Simple_repeat 1 35 0 1801 144 26 72 chr2 187061081 187061469 -63626385 + THE1C LTR MaLR 1 370 -5 267 31 0 0 chr2 187061469 187061501 -63626353 + (CA)n Simple_repeat Simple_repeat 2 33 0 492 328 25 19 chr2 187062459 187062687 -63625167 + MIR SINE MIR 36 262 0 389 236 16 24 chr2 187062747 187062870 -63624984 - MER69 DNA AcHobo -187 2339 2218 3722 46 2 0 chr2 187062965 187063420 -63624434 - L1PA5 LINE L1 -8 6146 5691 23 54 0 0 chr2 187063666 187063703 -63624151 + AT_rich Low_complexity Low_complexity 1 37 0 229 278 0 0 chr2 187063967 187064039 -63623815 + (TA)n Simple_repeat Simple_repeat 1 72 0 22 0 0 0 chr2 187064599 187064621 -63623233 + AT_rich Low_complexity Low_complexity 1 22 0 32667 34 1 1 chr2 187064715 187069486 -63618368 - L1PA3 LINE L1 -7 6148 1378 301 280 24 64 chr2 187069730 187069855 -63617999 + L2 LINE L2 3188 3307 -6 576 301 126 17 chr2 187069948 187070288 -63617566 + MLT1G1 LTR MaLR 1 285 -245 228 270 0 0 chr2 187070362 187070425 -63617429 + L1ME1 LINE L1 3386 3448 -2698 1136 277 42 14 chr2 187070475 187070786 -63617068 - MLT1E2 LTR MaLR -42 584 250 958 218 113 25 chr2 187070791 187071075 -63616779 + L1MD2 LINE L1 5829 6137 -222 457 259 86 10 chr2 187071143 187071340 -63616514 - L1M4 LINE L1 -1691 4455 4244 1476 225 63 75 chr2 187071363 187071869 -63615985 - MLT1D LTR MaLR 0 505 6 315 224 13 0 chr2 187071937 187072013 -63615841 - L1MA10 LINE L1 -10 6324 6248 264 246 63 39 chr2 187072011 187072139 -63615715 - L1M LINE L1 -743 5423 5297 * 280 215 0 0 chr2 187072156 187072221 -63615633 - L1MB8 LINE L1 0 6178 6114 1140 268 62 16 chr2 187072221 187073261 -63614593 + L1ME1 LINE L1 4549 5662 -504 357 293 93 39 chr2 187073286 187073491 -63614363 + L1ME1 LINE L1 5946 6161 -5 301 266 29 36 chr2 187073642 187073781 -63614073 + L1MCc LINE L1 106 243 -6180 21 0 0 0 chr2 187074867 187074888 -63612966 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 187075207 187075230 -63612624 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr2 187076651 187076683 -63611171 + (CA)n Simple_repeat Simple_repeat 1 32 0 34 24 0 0 chr2 187077028 187077069 -63610785 + AT_rich Low_complexity Low_complexity 1 41 0 23 33 0 0 chr2 187077476 187077506 -63610348 + AT_rich Low_complexity Low_complexity 1 30 0 365 302 53 41 chr2 187077886 187078055 -63609799 + MIR3 SINE MIR 38 208 0 188 153 45 18 chr2 187079971 187080082 -63607772 + (TA)n Simple_repeat Simple_repeat 2 115 0 412 333 22 0 chr2 187080209 187080347 -63607507 - MIR SINE MIR -1 261 121 * 951 289 203 23 chr2 187080320 187080878 -63606976 + L2 LINE L2 1363 2020 -1294 495 259 19 38 chr2 187080992 187081150 -63606704 - Zaphod DNA AcHobo -6 4025 3871 1728 284 76 53 chr2 187081151 187082186 -63605668 - Zaphod DNA AcHobo -2957 1074 16 21 36 0 0 chr2 187082658 187082686 -63605168 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr2 187083182 187083214 -63604640 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr2 187083437 187083461 -63604393 + AT_rich Low_complexity Low_complexity 1 24 0 282 293 73 24 chr2 187083572 187083695 -63604159 - MIR3 SINE MIR -5 203 75 1276 181 35 120 chr2 187083770 187084163 -63603691 + MER67C LTR ERV1 2 395 -243 1371 136 21 0 chr2 187084236 187084471 -63603383 - L1MA4 LINE L1 -9 6291 6052 288 221 137 11 chr2 187084540 187084635 -63603219 + MER67D LTR ERV1 403 509 -5 261 0 0 0 chr2 187085231 187085260 -63602594 + (CA)n Simple_repeat Simple_repeat 2 30 0 1059 193 98 7 chr2 187086726 187087000 -63600854 - L1MA9 LINE L1 -38 6274 5976 1263 242 124 68 chr2 187088748 187089530 -63598324 - L1MC4 LINE L1 -18 8024 7199 991 261 71 94 chr2 187089590 187090184 -63597670 - L1MC4a LINE L1 -799 7009 6430 2038 231 74 4 chr2 187090192 187090690 -63597164 + MER68 LTR ERV1 1 533 -29 469 241 19 57 chr2 187090828 187090986 -63596868 - L1MD1 LINE L1 -12 6230 6079 * 962 260 67 13 chr2 187090984 187091299 -63596555 - L1MD2 LINE L1 -215 6144 5813 7916 186 8 7 chr2 187091306 187092843 -63595011 - L1P LINE L1 -1571 4575 3037 1061 191 164 44 chr2 187092900 187093448 -63594406 - L1MCa LINE L1 -3908 2699 2044 * 6312 179 36 91 chr2 187093447 187094141 -63593713 - L1MCa LINE L1 -4825 1601 871 189 74 0 0 chr2 187094141 187094168 -63593686 + (TTAAA)n Simple_repeat Simple_repeat 1 27 0 6312 179 36 91 chr2 187094168 187095144 -63592710 - L1MCa LINE L1 -5555 871 22 1948 205 50 28 chr2 187095154 187095656 -63592198 - L1MD2 LINE L1 -538 5821 5309 6606 220 35 2 chr2 187095658 187097224 -63590630 + L1 LINE L1 2358 3975 -2171 1730 284 41 11 chr2 187097222 187097930 -63589924 - L1MD2 LINE L1 -850 5296 4568 * 27 49 0 0 chr2 187097954 187097995 -63589859 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 187098068 187098090 -63589764 + AT_rich Low_complexity Low_complexity 1 22 0 327 259 104 7 chr2 187100045 187100180 -63587674 + L1MD2 LINE L1 6195 6342 -17 219 231 0 0 chr2 187100712 187100751 -63587103 + (CA)n Simple_repeat Simple_repeat 2 40 0 24 32 0 0 chr2 187101010 187101041 -63586813 + AT_rich Low_complexity Low_complexity 1 31 0 229 364 39 32 chr2 187101172 187101326 -63586528 - MIR SINE MIR 0 262 108 1167 311 48 33 chr2 187101878 187102740 -63585114 - L2 LINE L2 0 3313 2447 189 253 35 58 chr2 187102742 187102829 -63585025 - L2 LINE L2 -1292 2022 1938 680 71 20 0 chr2 187102884 187102982 -63584872 - AluSg/x SINE Alu -11 301 202 22 0 0 0 chr2 187103012 187103034 -63584820 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 187103120 187103141 -63584713 + AT_rich Low_complexity Low_complexity 1 21 0 477 336 52 37 chr2 187104985 187105256 -63582598 - L2 LINE L2 -578 2736 2462 340 346 8 8 chr2 187105401 187105534 -63582320 - L2 LINE L2 -1388 1926 1794 1052 208 9 0 chr2 187106187 187106413 -63581441 + L1PA16 LINE L1 5923 6150 -16 460 68 27 0 chr2 187106735 187106808 -63581046 + (TCTA)n Simple_repeat Simple_repeat 1 75 0 300 27 0 0 chr2 187108070 187108107 -63579747 + (TG)n Simple_repeat Simple_repeat 2 38 0 367 239 62 91 chr2 187108241 187108417 -63579437 + MER5B DNA MER1_type 1 171 -7 331 320 180 7 chr2 187108437 187108587 -63579267 + MER5A DNA MER1_type 13 188 -1 275 299 12 24 chr2 187110348 187110512 -63577342 + (TA)n Simple_repeat Simple_repeat 1 162 0 185 167 21 62 chr2 187110564 187110612 -63577242 - L2 LINE L2 -1 3312 3267 1158 206 72 56 chr2 187111531 187111837 -63576017 - MLT1A2 LTR MaLR 0 374 64 1648 186 10 0 chr2 187111903 187112198 -63575656 + AluJo SINE Alu 1 298 -14 2601 255 23 13 chr2 187112215 187113295 -63574559 - L1MD1 LINE L1 -307 5935 4848 658 318 8 4 chr2 187113286 187113553 -63574301 + L1MC3 LINE L1 4392 4659 -1487 * 2913 147 28 0 chr2 187113538 187114048 -63573806 + L1MA3 LINE L1 5743 6266 -39 28 29 0 0 chr2 187114910 187114945 -63572909 + AT_rich Low_complexity Low_complexity 1 35 0 2374 224 50 16 chr2 187115006 187116070 -63571784 + L1MC3 LINE L1 4697 5793 -764 599 232 42 14 chr2 187116521 187116663 -63571191 + MER61D LTR ERV1 338 483 -18 2084 206 57 14 chr2 187116670 187117179 -63570675 + L1MC3 LINE L1 5789 6319 -1466 2311 232 83 65 chr2 187117228 187118083 -63569771 + L1MC2 LINE L1 2 860 -5185 251 242 30 40 chr2 187118074 187118173 -63569681 - L1M4 LINE L1 -1064 5082 4985 * 3772 254 70 28 chr2 187118182 187119232 -63568622 + L1MC2 LINE L1 3671 4805 -1759 13059 167 20 5 chr2 187119232 187121609 -63566245 + Tigger1 DNA MER2_type 1 2414 -4 3772 254 70 28 chr2 187121609 187122077 -63565777 + L1MC2 LINE L1 4805 5252 -1312 5067 205 59 53 chr2 187122090 187122470 -63565384 + L1MC2 LINE L1 5399 5775 -987 1860 192 64 40 chr2 187122470 187122892 -63564962 - MSTB1 LTR MaLR 0 432 1 5067 205 59 53 chr2 187122892 187124113 -63563741 + L1MC2 LINE L1 5775 6490 -272 360 135 0 167 chr2 187124113 187124209 -63563645 + MADE1 DNA Mariner 1 80 0 5067 205 59 53 chr2 187124209 187124476 -63563378 + L1MC2 LINE L1 6490 6754 -8 524 237 154 30 chr2 187124521 187124884 -63562970 + Charlie2 DNA MER1_type 2411 2818 -44 301 244 26 33 chr2 187125861 187126045 -63561809 - L1ME4a LINE L1 -248 5873 5691 230 193 53 35 chr2 187126056 187126113 -63561741 - L2 LINE L2 -9 3304 3247 246 299 55 24 chr2 187126917 187127044 -63560810 + L1ME LINE L1 5483 5613 -508 22 56 0 0 chr2 187127258 187127294 -63560560 + AT_rich Low_complexity Low_complexity 1 36 0 1976 202 48 54 chr2 187127300 187127800 -63560054 + MLT1D LTR MaLR 1 497 -8 400 329 49 81 chr2 187127866 187128276 -63559578 - L1ME4a LINE L1 -202 5919 5523 1205 254 30 53 chr2 187129657 187130051 -63557803 - MLT1E2 LTR MaLR -241 385 1 20195 168 18 22 chr2 187130353 187131556 -63556298 + L1M1 LINE L1 16 1222 -6343 2877 86 79 0 chr2 187131556 187131976 -63555878 + MLT2A2 LTR ERVL 1 453 0 20195 168 18 22 chr2 187131976 187134239 -63553615 + L1M1 LINE L1 1222 3467 -4098 2088 123 0 17 chr2 187134239 187134540 -63553314 + AluSp SINE Alu 1 296 -17 20195 168 18 22 chr2 187134540 187135122 -63552732 + L1M1 LINE L1 3467 4050 -3515 2228 199 14 14 chr2 187135116 187135609 -63552245 + L1M1 LINE L1 4774 5266 -2299 * 6819 111 13 9 chr2 187135591 187136765 -63551089 + L1MA2 LINE L1 5126 6304 0 22 35 0 0 chr2 187136765 187136794 -63551060 + AT_rich Low_complexity Low_complexity 1 29 0 260 353 17 9 chr2 187136794 187136910 -63550944 + L2 LINE L2 3195 3311 -2 365 375 45 33 chr2 187137592 187137923 -63549931 + L3 LINE CR1 1131 1465 -112 27 0 0 0 chr2 187138899 187138926 -63548928 + AT_rich Low_complexity Low_complexity 1 27 0 360 0 0 0 chr2 187139009 187139049 -63548805 + (TG)n Simple_repeat Simple_repeat 2 41 0 257 313 50 0 chr2 187139049 187139129 -63548725 + L2 LINE L2 3230 3313 0 282 29 0 0 chr2 187139877 187139912 -63547942 + (TG)n Simple_repeat Simple_repeat 2 36 0 27 49 0 0 chr2 187140778 187140819 -63547035 + AT_rich Low_complexity Low_complexity 1 41 0 3629 96 9 3 chr2 187140874 187141481 -63546373 - L1P LINE L1 -707 5424 4812 5116 74 28 3 chr2 187141481 187142183 -63545671 + L1PA8A LINE L1 5411 6131 0 3840 226 52 13 chr2 187142463 187144683 -63543171 - L1MB4 LINE L1 0 6180 3729 294 73 0 0 chr2 187145478 187145519 -63542335 + (CA)n Simple_repeat Simple_repeat 2 42 0 1640 114 20 0 chr2 187145873 187146127 -63541727 - L1MA1 LINE L1 -6 6296 6038 2176 202 26 0 chr2 187146656 187147071 -63540783 + MSTB LTR MaLR 1 426 0 27 49 0 0 chr2 187147172 187147213 -63540641 + AT_rich Low_complexity Low_complexity 1 41 0 1035 378 26 33 chr2 187147558 187148319 -63539535 - L3 LINE CR1 -1 1576 821 25 31 0 0 chr2 187148814 187148846 -63539008 + AT_rich Low_complexity Low_complexity 1 32 0 2267 81 0 33 chr2 187148919 187149226 -63538628 - AluY SINE Alu -14 297 1 21 0 0 0 chr2 187149294 187149315 -63538539 + AT_rich Low_complexity Low_complexity 1 21 0 1619 214 97 82 chr2 187150148 187150262 -63537592 + L1ME1 LINE L1 4964 5075 -1109 2250 113 0 0 chr2 187150262 187150573 -63537281 + AluY SINE Alu 1 311 0 1619 214 97 82 chr2 187150573 187150758 -63537096 + L1ME1 LINE L1 5075 5256 -928 243 0 0 0 chr2 187150758 187150785 -63537069 + (CA)n Simple_repeat Simple_repeat 2 28 0 1619 214 97 82 chr2 187150785 187150965 -63536889 + L1ME1 LINE L1 5256 5432 -752 1994 134 3 3 chr2 187150965 187151264 -63536590 + AluSq SINE Alu 1 299 -14 1619 214 97 82 chr2 187151264 187151599 -63536255 + L1ME1 LINE L1 5432 5777 -407 309 289 75 46 chr2 187151604 187151777 -63536077 + L1ME1 LINE L1 5908 6085 -81 4308 173 67 45 chr2 187151784 187152832 -63535022 + MER11C LTR ERVK 1 1071 0 4139 181 23 18 chr2 187152852 187153773 -63534081 + L1PB4 LINE L1 4858 5788 -368 198 103 0 0 chr2 187153773 187153802 -63534052 + (TA)n Simple_repeat Simple_repeat 1 29 0 4139 181 23 18 chr2 187153802 187154098 -63533756 + L1PB4 LINE L1 5788 6081 -75 609 221 117 70 chr2 187154205 187154418 -63533436 - MER58A DNA MER1_type 0 224 2 407 284 96 82 chr2 187154434 187154850 -63533004 + L1ME4a LINE L1 5535 5956 -165 22 0 0 0 chr2 187154940 187154962 -63532892 + AT_rich Low_complexity Low_complexity 1 22 0 246 312 65 0 chr2 187156297 187156390 -63531464 + MIR SINE MIR 57 155 -107 1439 200 0 0 chr2 187156582 187156847 -63531007 + L1M4 LINE L1 5357 5621 -563 2034 85 53 0 chr2 187157341 187157624 -63530230 + AluSx SINE Alu 11 308 -4 263 28 28 0 chr2 187157624 187157660 -63530194 + (TA)n Simple_repeat Simple_repeat 2 38 0 24 53 0 0 chr2 187157668 187157706 -63530148 + AT_rich Low_complexity Low_complexity 1 38 0 507 309 29 34 chr2 187158737 187158912 -63528942 - MIR3 SINE MIR -24 184 11 1132 293 80 41 chr2 187159513 187160192 -63527662 + MER20B DNA MER1_type 79 783 0 1501 165 107 4 chr2 187160580 187160852 -63527002 - AluSx SINE Alu -12 300 1 584 240 109 11 chr2 187160945 187161128 -63526726 + LTR16A LTR ERVL 234 434 -16 292 247 21 31 chr2 187161155 187161252 -63526602 - Charlie8 DNA MER1_type -2249 168 73 258 250 24 48 chr2 187161326 187161410 -63526444 - MER94 DNA DNA -51 83 2 30 45 0 0 chr2 187162163 187162207 -63525647 + AT_rich Low_complexity Low_complexity 1 44 0 258 206 0 0 chr2 187162338 187162401 -63525453 + (TG)n Simple_repeat Simple_repeat 2 64 0 754 131 12 0 chr2 187162505 187162673 -63525181 + (TA)n Simple_repeat Simple_repeat 2 171 0 697 197 16 0 chr2 187162673 187162800 -63525054 - AluJb SINE Alu -178 134 6 217 255 0 0 chr2 187164011 187164062 -63523792 + L2 LINE L2 2201 2251 -1063 489 143 0 0 chr2 187164095 187164172 -63523682 + MADE1 DNA Mariner 3 79 -1 229 81 0 27 chr2 187164966 187165003 -63522851 - MLT2D LTR ERVL -289 125 90 361 264 41 64 chr2 187165112 187165332 -63522522 - HAL1 LINE L1 0 2507 2293 588 278 40 17 chr2 187165658 187165834 -63522020 - MLT1F1 LTR MaLR -375 192 13 699 350 99 20 chr2 187165989 187166735 -63521119 - HERVL LTR ERVL -1713 3941 3137 319 304 20 0 chr2 187166942 187167044 -63520810 - HERVL LTR ERVL -2098 2898 2795 668 218 71 6 chr2 187167369 187167539 -63520315 + L1MB7 LINE L1 5420 5600 -578 360 179 0 0 chr2 187167532 187167599 -63520255 - L1M4 LINE L1 -435 5749 5683 * 404 149 14 0 chr2 187168511 187168585 -63519269 - L1MC2 LINE L1 -10 6334 6260 1065 169 70 0 chr2 187168585 187168794 -63519060 + L1MB7 LINE L1 5950 6177 -7 313 403 21 25 chr2 187169072 187169290 -63518564 - L1MC/D LINE L1 -2067 5741 5523 1832 158 0 3 chr2 187169290 187169588 -63518266 + AluSx SINE Alu 1 297 -15 313 403 21 25 chr2 187169588 187169610 -63518244 - L1MC/D LINE L1 -2285 5523 5502 21 0 0 0 chr2 187169610 187169631 -63518223 + AT_rich Low_complexity Low_complexity 1 21 0 545 249 64 132 chr2 187170572 187170919 -63516935 + L1MCb LINE L1 121 430 -5615 2023 91 14 0 chr2 187170919 187171246 -63516608 + AluSc SINE Alu 1 331 0 545 249 64 132 chr2 187171246 187171367 -63516487 + L1MCb LINE L1 430 558 -5487 2437 225 29 31 chr2 187171449 187172419 -63515435 + L1MCb LINE L1 555 1748 -4921 240 35 0 0 chr2 187172419 187172448 -63515406 + (CA)n Simple_repeat Simple_repeat 2 30 0 2437 225 29 31 chr2 187172448 187172519 -63515335 + L1MCb LINE L1 1748 1818 -4851 24 53 0 0 chr2 187172823 187172861 -63514993 + AT_rich Low_complexity Low_complexity 1 38 0 24 32 0 0 chr2 187173555 187173586 -63514268 + AT_rich Low_complexity Low_complexity 1 31 0 346 115 0 0 chr2 187173732 187173784 -63514070 + MER20 DNA MER1_type 164 215 -4 6154 156 56 20 chr2 187173933 187175121 -63512733 + Tigger3b DNA MER2_type 1 1231 0 979 171 23 37 chr2 187175131 187175348 -63512506 + MER44D DNA MER2_type 16 499 -110 939 294 91 21 chr2 187175566 187175950 -63511904 + MLT1E2 LTR MaLR 207 617 -9 248 293 0 0 chr2 187176053 187176111 -63511743 + MIR SINE MIR 96 153 -55 524 232 8 0 chr2 187176206 187176331 -63511523 - L1PA15 LINE L1 -1118 5028 4903 5487 117 4 50 chr2 187176331 187177482 -63510372 + L1PA15 LINE L1 5051 6158 -7 1044 130 0 6 chr2 187177493 187177654 -63510200 + L1P4 LINE L1 5522 5681 -485 1988 134 0 0 chr2 187177831 187178144 -63509710 + AluSx SINE Alu 1 313 0 5373 167 18 36 chr2 187178246 187179516 -63508338 - L1MA5A LINE L1 -3 6294 5048 5156 184 39 30 chr2 187179509 187179984 -63507870 + L1 LINE L1 3020 3489 -2657 * 5767 98 47 0 chr2 187179984 187180121 -63507733 + L1PA11 LINE L1 4515 4644 -1530 186 43 0 0 chr2 187180121 187180144 -63507710 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5767 98 47 0 chr2 187180144 187181606 -63506248 + L1PA11 LINE L1 4644 6172 -2 5156 184 39 30 chr2 187181606 187182343 -63505511 + L1 LINE L1 3489 4243 -1903 229 301 0 12 chr2 187182354 187182469 -63505385 + (TATG)n Simple_repeat Simple_repeat 1 113 0 7536 31 1 1 chr2 187182686 187183736 -63504118 + L1PA3 LINE L1 5106 6155 0 31 0 0 0 chr2 187183736 187183767 -63504087 + AT_rich Low_complexity Low_complexity 1 31 0 30 27 0 0 chr2 187183793 187183830 -63504024 + AT_rich Low_complexity Low_complexity 1 37 0 29 0 0 0 chr2 187184128 187184157 -63503697 + AT_rich Low_complexity Low_complexity 1 29 0 26 88 0 0 chr2 187185541 187185609 -63502245 + AT_rich Low_complexity Low_complexity 1 68 0 720 289 101 35 chr2 187185954 187186411 -63501443 - L1ME LINE L1 -348 5822 5336 349 261 35 28 chr2 187186447 187186589 -63501265 - L1ME LINE L1 -3785 2361 2219 6593 62 2 0 chr2 187186649 187187487 -63500367 - L1PA6 LINE L1 -3 6151 5312 5157 57 1 0 chr2 187187494 187188157 -63499697 - L1PA6 LINE L1 -1193 4953 4290 912 155 13 0 chr2 187188154 187188309 -63499545 + L1MA5A LINE L1 5801 5957 -340 * 4362 50 0 2 chr2 187188306 187188850 -63499004 + L1P LINE L1 3758 4300 -1846 22 80 0 0 chr2 187188932 187188982 -63498872 + AT_rich Low_complexity Low_complexity 1 50 0 354 331 15 44 chr2 187189388 187189524 -63498330 - L2 LINE L2 0 3272 3141 21 0 0 0 chr2 187189918 187189939 -63497915 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 187191045 187191075 -63496779 + AT_rich Low_complexity Low_complexity 1 30 0 211 111 22 22 chr2 187191573 187191618 -63496236 + GA-rich Low_complexity Low_complexity 3 47 0 24 32 0 0 chr2 187191680 187191711 -63496143 + AT_rich Low_complexity Low_complexity 1 31 0 271 232 18 9 chr2 187191878 187191990 -63495864 + (TA)n Simple_repeat Simple_repeat 1 113 0 386 323 32 32 chr2 187192654 187192809 -63495045 + MIR3 SINE MIR 40 194 -14 2223 209 20 36 chr2 187192866 187193534 -63494320 - L1MB2 LINE L1 -2 6169 5555 5346 152 24 5 chr2 187194235 187195160 -63492694 - L1PA16 LINE L1 -8 6158 5217 26 0 0 0 chr2 187195361 187195387 -63492467 + AT_rich Low_complexity Low_complexity 1 26 0 1798 148 101 44 chr2 187195566 187195971 -63491883 - MSTA LTR MaLR 0 428 1 336 399 89 6 chr2 187196060 187196386 -63491468 - L2 LINE L2 -534 2780 2428 23377 36 2 0 chr2 187199367 187202981 -63484873 + L1PA4 LINE L1 2515 6132 -23 1014 199 85 29 chr2 187204826 187205098 -63482756 - L1MD3 LINE L1 -13 7982 7696 * 1343 194 43 26 chr2 187205075 187205421 -63482433 - L1MC4a LINE L1 -440 7368 7017 31 26 0 0 chr2 187205746 187205784 -63482070 + AT_rich Low_complexity Low_complexity 1 38 0 185 420 0 0 chr2 187207524 187207593 -63480261 + L2 LINE L2 3200 3268 -45 462 343 68 29 chr2 187207642 187208073 -63479781 + L2 LINE L2 2735 3180 -133 190 227 0 23 chr2 187208133 187208177 -63479677 + L2 LINE L2 3230 3272 0 4904 121 15 27 chr2 187208342 187209184 -63478670 + L1MA2 LINE L1 5473 6304 0 810 129 0 22 chr2 187209385 187209524 -63478330 - AluSg/x SINE Alu -14 296 161 243 283 94 22 chr2 187209613 187209751 -63478103 - L1MEc LINE L1 -4386 2010 1863 366 324 84 38 chr2 187209800 187210848 -63477006 - L1MEc LINE L1 -4641 1755 660 2936 174 43 2 chr2 187210877 187211411 -63476443 - L1PA16 LINE L1 -3 6163 5608 270 182 45 0 chr2 187211799 187211887 -63475967 + (CTATA)n Simple_repeat Simple_repeat 3 94 0 366 333 38 21 chr2 187212247 187212433 -63475421 - MIR SINE MIR 0 262 74 195 69 0 0 chr2 187212569 187212598 -63475256 + (TG)n Simple_repeat Simple_repeat 2 30 0 5527 139 23 35 chr2 187212602 187212795 -63475059 - Tigger4(Zombi) DNA MER2_type -64 2667 2473 2068 111 49 34 chr2 187212795 187213145 -63474709 + L1PB3 LINE L1 5793 6147 -7 5527 139 23 35 chr2 187213145 187213953 -63473901 - Tigger4(Zombi) DNA MER2_type -258 2473 1678 668 169 17 0 chr2 187213955 187214073 -63473781 - Tigger4(Zombi) DNA MER2_type -1429 1302 1183 5288 165 28 32 chr2 187214173 187214942 -63472912 - Tigger4(Zombi) DNA MER2_type -1711 1020 256 207 69 0 0 chr2 187214942 187214971 -63472883 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5288 165 28 32 chr2 187214971 187215221 -63472633 - Tigger4(Zombi) DNA MER2_type -2475 256 6 2151 117 0 0 chr2 187215573 187215872 -63471982 + AluY SINE Alu 1 299 -12 304 131 33 0 chr2 187215908 187215969 -63471885 + L1MA7 LINE L1 6227 6289 -2 22 0 0 0 chr2 187215971 187215993 -63471861 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 187216619 187216640 -63471214 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 187217552 187217573 -63470281 + AT_rich Low_complexity Low_complexity 1 21 0 1708 203 37 20 chr2 187218079 187218488 -63469366 + LTR52 LTR ERVL 1 416 -5 275 83 0 0 chr2 187219836 187219872 -63467982 - U1 snRNA snRNA -129 36 1 554 240 0 0 chr2 187220995 187221116 -63466738 + FLAM_A SINE Alu 21 141 -1 2358 77 3 3 chr2 187221223 187221523 -63466331 + AluY SINE Alu 1 300 -11 21 71 0 0 chr2 187222577 187222619 -63465235 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 187222637 187222661 -63465193 + AT_rich Low_complexity Low_complexity 1 24 0 198 71 0 0 chr2 187223329 187223357 -63464497 + (CA)n Simple_repeat Simple_repeat 2 29 0 244 318 12 0 chr2 187223774 187223859 -63463995 + (TA)n Simple_repeat Simple_repeat 2 87 0 2067 121 0 57 chr2 187224258 187224589 -63463265 + AluSx SINE Alu 1 312 0 700 304 106 43 chr2 187224851 187225421 -63462433 - L2 LINE L2 0 3313 2730 1286 287 57 54 chr2 187225424 187226141 -63461713 - L2 LINE L2 -1090 2224 1506 329 245 14 122 chr2 187226433 187226580 -63461274 - MER5B DNA MER1_type -6 172 42 1984 57 0 70 chr2 187227077 187227375 -63460479 - L1PA7 LINE L1 -3 6151 5875 1238 152 0 112 chr2 187227482 187227778 -63460076 - AluJo SINE Alu -49 263 1 22 35 0 0 chr2 187230569 187230598 -63457256 + AT_rich Low_complexity Low_complexity 1 29 0 367 300 54 42 chr2 187231007 187231247 -63456607 - L1MC/D LINE L1 -2000 5808 5566 368 315 111 29 chr2 187231255 187231534 -63456320 + L1ME3A LINE L1 5855 6156 -14 1855 256 43 37 chr2 187231723 187232391 -63455463 - L1ME1 LINE L1 -5 6161 5490 * 2993 259 65 39 chr2 187232365 187233652 -63454202 - L1ME1 LINE L1 -1100 5046 3726 1154 279 114 38 chr2 187233654 187234081 -63453773 - L1ME1 LINE L1 -2587 3559 3166 1563 162 8 8 chr2 187234081 187234346 -63453508 - AluJb SINE Alu -45 267 3 1154 279 114 38 chr2 187234346 187234778 -63453076 - L1ME1 LINE L1 -2980 3166 2635 528 282 33 25 chr2 187234796 187235041 -63452813 + L1ME2 LINE L1 5912 6158 -6 247 316 83 8 chr2 187235628 187235761 -63452093 - MIR SINE MIR -7 255 113 190 328 188 0 chr2 187236846 187236910 -63450944 - MIR SINE MIR -184 78 3 240 35 0 0 chr2 187237242 187237271 -63450583 + (TAA)n Simple_repeat Simple_repeat 2 30 0 183 162 0 0 chr2 187237412 187237449 -63450405 + (TAA)n Simple_repeat Simple_repeat 2 38 0 680 258 68 36 chr2 187237521 187237773 -63450081 - MIR SINE MIR -1 261 2 1975 138 6 6 chr2 187237902 187238214 -63449640 - AluSx SINE Alu 0 312 1 2048 110 7 23 chr2 187238320 187238629 -63449225 + AluSx SINE Alu 1 304 -8 2303 84 0 3 chr2 187239243 187239540 -63448314 - AluSc SINE Alu -13 296 1 184 323 54 54 chr2 187239630 187239679 -63448175 - MIR SINE MIR -16 246 195 2657 29 0 3 chr2 187239679 187239987 -63447867 - AluY SINE Alu -3 308 2 184 323 54 54 chr2 187239987 187240030 -63447824 - MIR SINE MIR -66 196 154 5532 162 15 36 chr2 187240159 187241200 -63446654 + MSTA-int LTR MaLR 558 1576 -4 1539 165 154 45 chr2 187241203 187241585 -63446269 + MSTA LTR MaLR 5 428 0 232 310 64 29 chr2 187242154 187242325 -63445529 + L1M4 LINE L1 5096 5272 -874 22 0 0 0 chr2 187242632 187242654 -63445200 + AT_rich Low_complexity Low_complexity 1 22 0 2493 57 0 19 chr2 187242697 187243041 -63444813 - AluY SINE Alu 0 338 1 23 0 0 0 chr2 187243469 187243492 -63444362 + AT_rich Low_complexity Low_complexity 1 23 0 1647 130 33 102 chr2 187244545 187244906 -63442948 - MER1B DNA MER1_type -1 336 1 1869 131 40 30 chr2 187245492 187245820 -63442034 - THE1B LTR MaLR 0 364 34 405 230 109 113 chr2 187246232 187246389 -63441465 + MIR SINE MIR 29 186 -76 1993 220 43 24 chr2 187246389 187246898 -63440956 + Charlie1b DNA MER1_type 5 523 0 405 230 109 113 chr2 187246898 187246970 -63440884 + MIR SINE MIR 186 257 -5 23 0 0 0 chr2 187247025 187247048 -63440806 + AT_rich Low_complexity Low_complexity 1 23 0 2856 134 97 0 chr2 187247050 187247543 -63440311 - L1PA16 LINE L1 -9 6157 5617 28904 126 12 59 chr2 187247583 187254055 -63433799 - L1PA8 LINE L1 -6 6166 14 204 67 0 0 chr2 187254218 187254248 -63433606 + (TA)n Simple_repeat Simple_repeat 1 30 0 236 348 59 7 chr2 187254474 187254609 -63433245 - L2 LINE L2 -5 3308 3167 216 0 0 0 chr2 187255757 187255781 -63432073 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 217 397 0 0 chr2 187255918 187255996 -63431858 - L3 LINE CR1 -118 1459 1382 24 53 0 0 chr2 187256258 187256296 -63431558 + AT_rich Low_complexity Low_complexity 1 38 0 2161 71 0 56 chr2 187256850 187257172 -63430682 + AluY SINE Alu 1 304 -7 364 292 129 17 chr2 187258226 187258404 -63429450 + MLT1L LTR MaLR 400 597 -18 28 48 0 0 chr2 187258786 187258828 -63429026 + AT_rich Low_complexity Low_complexity 1 42 0 1310 133 65 0 chr2 187259985 187260233 -63427621 - L1MA6 LINE L1 0 6300 6037 23 0 0 0 chr2 187260358 187260381 -63427473 + AT_rich Low_complexity Low_complexity 1 23 0 226 305 75 92 chr2 187260933 187261172 -63426682 - L3 LINE CR1 -165 1412 1178 270 270 0 0 chr2 187261796 187261870 -63425984 - MLT1H LTR MaLR -470 79 6 3551 45 5 0 chr2 187262176 187262625 -63425229 + L1PA7 LINE L1 5704 6154 0 2425 161 124 21 chr2 187263237 187263754 -63424100 + MER101B LTR ERV1 1 570 0 2159 129 3 0 chr2 187264093 187264404 -63423450 - AluSx SINE Alu 0 312 1 23 33 0 0 chr2 187264593 187264623 -63423231 + AT_rich Low_complexity Low_complexity 1 30 0 782 224 72 50 chr2 187267895 187268327 -63419527 - MLT1F1 LTR MaLR -7 535 1 21 36 0 0 chr2 187269364 187269392 -63418462 + AT_rich Low_complexity Low_complexity 1 28 0 394 0 0 0 chr2 187271534 187271578 -63416276 + THE1C LTR MaLR 1 44 -331 215 250 0 31 chr2 187271748 187271812 -63416042 + (CATATA)n Simple_repeat Simple_repeat 6 67 0 1499 142 79 59 chr2 187272921 187273224 -63414630 - AluSq SINE Alu -4 309 1 26 0 0 0 chr2 187273279 187273305 -63414549 + AT_rich Low_complexity Low_complexity 1 26 0 25 51 0 0 chr2 187273611 187273650 -63414204 + AT_rich Low_complexity Low_complexity 1 39 0 31 0 0 0 chr2 187274544 187274575 -63413279 + AT_rich Low_complexity Low_complexity 1 31 0 25 83 0 0 chr2 187275915 187275975 -63411879 + AT_rich Low_complexity Low_complexity 1 60 0 23 68 0 0 chr2 187276301 187276345 -63411509 + AT_rich Low_complexity Low_complexity 1 44 0 643 192 172 0 chr2 187276797 187277000 -63410854 + Charlie5 DNA MER1_type 2367 2604 -8 21 36 0 0 chr2 187277760 187277788 -63410066 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr2 187278005 187278045 -63409809 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr2 187279019 187279047 -63408807 + AT_rich Low_complexity Low_complexity 1 28 0 212 42 0 104 chr2 187279634 187279682 -63408172 + (TTTTTA)n Simple_repeat Simple_repeat 5 47 0 220 136 0 23 chr2 187280111 187280155 -63407699 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 896 92 8 15 chr2 187280234 187280364 -63407490 + AluSq/x SINE Alu 1 129 -184 216 175 48 0 chr2 187280972 187281035 -63406819 + CT-rich Low_complexity Low_complexity 2 67 0 231 386 18 9 chr2 187281534 187281648 -63406206 + L2 LINE L2 3199 3313 0 2885 99 40 0 chr2 187282233 187282659 -63405195 + L1MA1 LINE L1 5860 6302 0 25 0 0 0 chr2 187282945 187282970 -63404884 + AT_rich Low_complexity Low_complexity 1 25 0 2302 164 119 11 chr2 187284425 187284863 -63402991 + LTR45B LTR ERV1 5 489 0 1614 260 132 25 chr2 187284982 187285534 -63402320 - L1ME2 LINE L1 -16 6148 5510 1352 244 16 16 chr2 187285534 187285899 -63401955 - MLT1A1 LTR MaLR 0 365 1 1614 260 132 25 chr2 187285899 187286020 -63401834 - L1ME2 LINE L1 -654 5510 5403 1487 259 41 42 chr2 187286022 187286705 -63401149 - L1ME2 LINE L1 -864 5282 4601 * 2511 284 76 30 chr2 187286698 187287940 -63399914 + L1MEc LINE L1 245 1543 -5064 2208 250 57 43 chr2 187287947 187288074 -63399780 + L1MEc LINE L1 1416 1540 -4886 198 71 0 0 chr2 187288074 187288102 -63399752 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2208 250 57 43 chr2 187288102 187289735 -63398119 + L1MEc LINE L1 1540 3482 -2944 5198 133 16 69 chr2 187289763 187289865 -63397989 + L1PA15 LINE L1 5227 5333 -832 1917 157 3 0 chr2 187289865 187290159 -63397695 + AluSx SINE Alu 1 295 -17 5198 133 16 69 chr2 187290159 187291022 -63396832 + L1PA15 LINE L1 5333 6161 -4 365 310 50 19 chr2 187291011 187291272 -63396582 + L1MEc LINE L1 3488 3756 -2670 * 976 206 115 10 chr2 187291269 187291556 -63396298 + L1MEc LINE L1 4227 5535 -891 743 247 96 11 chr2 187291595 187291866 -63395988 - L1MEc LINE L1 -2191 4750 4457 430 250 41 61 chr2 187291869 187292065 -63395789 - L1MEc LINE L1 -3241 3700 3509 279 0 0 0 chr2 187292100 187292131 -63395723 + (TG)n Simple_repeat Simple_repeat 2 32 0 332 246 16 0 chr2 187292167 187292228 -63395626 - MER2 DNA MER2_type 0 345 284 1227 179 5 0 chr2 187292263 187292470 -63395384 - MER2 DNA MER2_type -136 209 2 451 221 44 0 chr2 187292518 187292654 -63395200 - L1MEc LINE L1 -3515 3426 3285 1395 232 110 69 chr2 187292757 187293654 -63394200 - L1MEc LINE L1 -3985 3137 2204 247 274 89 37 chr2 187293830 187293965 -63393889 - L1MEc LINE L1 -6262 161 20 202 229 0 0 chr2 187294115 187294163 -63393691 + (TA)n Simple_repeat Simple_repeat 1 48 0 695 318 11 11 chr2 187294660 187294927 -63392927 - L1ME3 LINE L1 -24 6138 5872 2153 248 49 9 chr2 187296885 187297457 -63390397 - MER90 LTR ERV1 0 614 20 234 340 10 10 chr2 187297822 187297919 -63389935 - MIR SINE MIR -81 127 31 1816 153 27 0 chr2 187298297 187298597 -63389257 + Tigger3(Golem) DNA MER2_type 1 308 -2721 2220 96 5 76 chr2 187298597 187298739 -63389115 - L1PB1 LINE L1 0 6151 6001 2075 142 0 0 chr2 187298739 187299042 -63388812 - AluSx SINE Alu -7 305 3 2220 96 5 76 chr2 187299042 187299295 -63388559 - L1PB1 LINE L1 -150 6001 5784 238 36 0 0 chr2 187299296 187299324 -63388530 + (CA)n Simple_repeat Simple_repeat 2 29 0 668 187 6 18 chr2 187299324 187299495 -63388359 + (TA)n Simple_repeat Simple_repeat 2 170 0 307 325 9 9 chr2 187299762 187299876 -63387978 + MIR SINE MIR 149 262 0 3127 72 16 11 chr2 187300327 187300773 -63387081 + LTR7 LTR ERV1 1 448 -2 1175 185 126 0 chr2 187300894 187301051 -63386803 - AluJo SINE Alu -16 286 150 210 37 0 0 chr2 187301051 187301078 -63386776 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1175 185 126 0 chr2 187301078 187301174 -63386680 - AluJo SINE Alu -152 150 1 238 217 14 43 chr2 187301285 187301354 -63386500 + (TATATG)n Simple_repeat Simple_repeat 6 72 0 27 0 0 0 chr2 187301854 187301881 -63385973 + AT_rich Low_complexity Low_complexity 1 27 0 1494 193 0 18 chr2 187302742 187303022 -63384832 + AluJo SINE Alu 13 287 -25 23 0 0 0 chr2 187303543 187303566 -63384288 + AT_rich Low_complexity Low_complexity 1 23 0 2314 67 0 7 chr2 187305817 187306115 -63381739 - AluY SINE Alu -15 296 1 515 224 95 57 chr2 187306581 187306791 -63381063 + MER106A DNA MER1_type 12 229 -7 244 308 44 0 chr2 187306834 187306925 -63380929 - L1ME2 LINE L1 -3 6161 6067 438 244 41 23 chr2 187307026 187307247 -63380607 - L1ME2 LINE L1 -194 5968 5686 2353 86 0 0 chr2 187308136 187308440 -63379414 - AluY SINE Alu -7 304 1 1564 186 102 6 chr2 187308694 187309027 -63378827 + MLT1A1 LTR MaLR 1 365 0 938 221 72 57 chr2 187309083 187309683 -63378171 + L1ME LINE L1 4963 5572 -594 1350 104 0 6 chr2 187310076 187310259 -63377595 + AluSc SINE Alu 1 182 -127 1732 162 9 19 chr2 187310440 187310761 -63377093 - Tigger3b DNA MER2_type -657 574 257 7062 176 24 10 chr2 187310761 187312031 -63375823 - L1PA15 LINE L1 -68 6097 4779 410 0 0 20 chr2 187312031 187312082 -63375772 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 7062 176 24 10 chr2 187312082 187313053 -63374801 - L1PA15 LINE L1 -1386 4779 3823 1216 205 45 0 chr2 187313079 187313303 -63374551 - Tigger3b DNA MER2_type -997 234 1 2669 140 11 20 chr2 187313501 187313950 -63373904 - MER65A LTR ERV1 0 445 1 473 214 22 17 chr2 187314126 187314304 -63373550 + (TA)n Simple_repeat Simple_repeat 2 180 0 462 343 61 18 chr2 187315640 187315920 -63371934 - MER110 LTR ERV1 -27 464 173 798 251 56 72 chr2 187316319 187316638 -63371216 - LTR40b LTR ERVL 0 462 149 868 289 52 7 chr2 187316679 187316949 -63370905 - HERVL40 LTR ERVL -39 5491 5210 774 271 112 11 chr2 187316991 187317464 -63370390 - Charlie2a DNA MER1_type -1327 1535 1015 2166 214 7 13 chr2 187317504 187317961 -63369893 - L1M2 LINE L1 -5104 1745 1292 400 273 41 10 chr2 187317965 187318159 -63369695 - Charlie2a DNA MER1_type -1924 938 739 444 264 150 12 chr2 187318176 187318430 -63369424 - Charlie2a DNA MER1_type -2237 625 337 218 306 0 24 chr2 187319654 187319739 -63368115 + L2 LINE L2 2002 2084 -1230 2088 122 0 16 chr2 187319805 187320117 -63367737 - AluSx SINE Alu -3 309 3 208 194 32 16 chr2 187320162 187320224 -63367630 + (TTCA)n Simple_repeat Simple_repeat 1 63 0 374 293 23 22 chr2 187320540 187320702 -63367152 + L1M4 LINE L1 2 428 -6218 2375 267 97 10 chr2 187320871 187322005 -63365849 + L1M4 LINE L1 825 2063 -4583 21 89 0 0 chr2 187322059 187322115 -63365739 + AT_rich Low_complexity Low_complexity 1 56 0 23 86 0 0 chr2 187322149 187322207 -63365647 + AT_rich Low_complexity Low_complexity 1 58 0 2073 280 106 15 chr2 187322249 187322560 -63365294 - L1M4 LINE L1 -1313 4833 4552 607 208 0 24 chr2 187322560 187322685 -63365169 - FLAM_A SINE Alu -11 122 1 2073 280 106 15 chr2 187322685 187323721 -63364133 - L1M4 LINE L1 -1594 4552 3365 828 263 99 7 chr2 187323777 187324203 -63363651 - L1M4 LINE L1 -2905 3241 2777 191 122 0 24 chr2 187324245 187324286 -63363568 + (TTTTA)n Simple_repeat Simple_repeat 4 43 0 212 254 15 15 chr2 187324804 187324871 -63362983 + CT-rich Low_complexity Low_complexity 4 70 0 1593 144 77 10 chr2 187325748 187326061 -63361793 + L1MB3 LINE L1 5847 6180 -3 2294 82 0 41 chr2 187326125 187326441 -63361413 + AluSg SINE Alu 1 303 -7 13036 199 29 9 chr2 187326826 187329901 -63357953 - L1PBa LINE L1 -1060 5802 2666 1919 176 20 50 chr2 187329939 187330336 -63357518 + MER61D LTR ERV1 114 498 -3 8860 102 58 1 chr2 187330337 187331779 -63356075 - L1PBa LINE L1 -4190 2673 995 865 221 36 0 chr2 187331771 187331966 -63355888 - L1PBa LINE L1 -6661 202 1 * 1316 164 172 105 chr2 187332333 187332613 -63355241 + MSTB LTR MaLR 11 326 -100 2180 116 0 0 chr2 187332613 187332923 -63354931 - AluSx SINE Alu -2 310 1 1316 164 172 105 chr2 187332923 187333032 -63354822 + MSTB LTR MaLR 326 426 0 207 146 0 0 chr2 187333064 187333105 -63354749 + (TA)n Simple_repeat Simple_repeat 2 42 0 456 330 25 15 chr2 187333635 187333838 -63354016 - MIR SINE MIR -9 253 49 261 242 88 22 chr2 187334910 187335001 -63352853 - MER41E LTR ERV1 -59 453 357 186 394 0 0 chr2 187335078 187335144 -63352710 + MER5A DNA MER1_type 61 126 -63 34 102 0 0 chr2 187336678 187336796 -63351058 + AT_rich Low_complexity Low_complexity 1 118 0 22 0 0 0 chr2 187337054 187337076 -63350778 + AT_rich Low_complexity Low_complexity 1 22 0 343 324 97 11 chr2 187338202 187338378 -63349476 - L2 LINE L2 -790 2524 2334 196 346 45 39 chr2 187338483 187338639 -63349215 - L2 LINE L2 -2233 1081 925 270 361 69 31 chr2 187338934 187339283 -63348571 - L2 LINE L2 -2778 536 175 354 313 27 18 chr2 187339531 187339643 -63348211 - L2 LINE L2 0 3313 3201 2268 100 0 3 chr2 187339796 187340095 -63347759 + AluSc SINE Alu 1 298 -11 4746 35 2 0 chr2 187340100 187340665 -63347189 + L1PA5 LINE L1 5589 6154 0 23 0 0 0 chr2 187341181 187341204 -63346650 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr2 187341690 187341723 -63346131 + AT_rich Low_complexity Low_complexity 1 33 0 33 73 0 0 chr2 187341929 187341997 -63345857 + AT_rich Low_complexity Low_complexity 1 68 0 26 64 0 0 chr2 187342328 187342375 -63345479 + AT_rich Low_complexity Low_complexity 1 47 0 1291 96 5 32 chr2 187342472 187342659 -63345195 + AluSx SINE Alu 11 192 -120 26 64 0 0 chr2 187342848 187342895 -63344959 + AT_rich Low_complexity Low_complexity 1 47 0 2224 97 10 0 chr2 187342992 187343290 -63344564 + AluSx SINE Alu 11 311 -1 615 174 37 0 chr2 187343290 187343399 -63344455 + FLAM_A SINE Alu 13 125 -17 22 35 0 0 chr2 187344576 187344605 -63343249 + AT_rich Low_complexity Low_complexity 1 29 0 980 249 41 41 chr2 187344607 187344900 -63342954 + LTR40b LTR ERVL 170 462 0 23 0 0 0 chr2 187345261 187345284 -63342570 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 187345652 187345680 -63342174 + AT_rich Low_complexity Low_complexity 1 28 0 2279 75 23 7 chr2 187345914 187346222 -63341632 - MLT2A1 LTR ERVL -131 313 1 1465 240 69 6 chr2 187346401 187346751 -63341103 - MER77 LTR ERV1 0 605 234 2138 170 44 48 chr2 187346843 187347343 -63340511 + Tigger6 DNA MER2_type 1023 1520 -77 2400 172 9 0 chr2 187347358 187347783 -63340071 - L1MB2 LINE L1 -2 6169 5741 1485 288 107 40 chr2 187348044 187349065 -63338789 - L2 LINE L2 0 3313 2230 289 254 42 0 chr2 187349089 187349160 -63338694 - MER45C DNA AcHobo 0 953 880 431 291 0 0 chr2 187349238 187349348 -63338506 - MER45C DNA AcHobo -558 395 286 2115 114 0 16 chr2 187349514 187349831 -63338023 - AluSq SINE Alu -1 312 1 30 59 0 0 chr2 187349983 187350034 -63337820 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr2 187350410 187350432 -63337422 + AT_rich Low_complexity Low_complexity 1 22 0 1775 228 77 24 chr2 187350887 187351356 -63336498 + LTR42 LTR ERVL 1 494 -1 1064 360 62 28 chr2 187353920 187354953 -63332901 - L2 LINE L2 -1 3312 2241 1962 326 121 21 chr2 187355031 187356252 -63331602 + L2 LINE L2 482 1824 -1490 490 335 188 13 chr2 187356288 187356661 -63331193 + L2 LINE L2 2521 2958 -356 362 322 79 17 chr2 187356749 187356926 -63330928 + L2 LINE L2 3117 3304 -9 1016 334 188 20 chr2 187356943 187357677 -63330177 + L2 LINE L2 1781 2637 -677 1866 254 49 16 chr2 187357679 187358126 -63329728 + MLT2B2 LTR ERVL 10 476 -39 473 0 18 0 chr2 187358126 187358183 -63329671 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 1866 254 49 16 chr2 187358183 187358224 -63329630 + MLT2B2 LTR ERVL 476 514 -1 3343 71 7 9 chr2 187358346 187358797 -63329057 - L1PA7 LINE L1 -3 6151 5702 717 307 118 57 chr2 187358821 187359116 -63328738 + L2 LINE L2 2697 2972 -341 2281 156 18 45 chr2 187359116 187359558 -63328296 - MSTB1 LTR MaLR -2 430 1 717 307 118 57 chr2 187359558 187359827 -63328027 + L2 LINE L2 2972 3313 0 22 88 0 0 chr2 187360310 187360367 -63327487 + AT_rich Low_complexity Low_complexity 1 57 0 534 43 0 0 chr2 187360659 187360728 -63327126 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 22 35 0 0 chr2 187361601 187361630 -63326224 + AT_rich Low_complexity Low_complexity 1 29 0 254 111 0 0 chr2 187361906 187361951 -63325903 - LTR66 LTR ERVL -172 438 394 327 25 0 0 chr2 187361953 187361993 -63325861 + (GA)n Simple_repeat Simple_repeat 2 41 0 566 337 40 31 chr2 187363476 187363984 -63323870 + HERV16 LTR ERVL 1678 2241 -3413 250 236 28 14 chr2 187364150 187364222 -63323632 + HERV16 LTR ERVL 1719 1791 -3205 15454 187 52 35 chr2 187364559 187365258 -63322596 - L1PA13 LINE L1 -3 6811 6125 2012 78 48 0 chr2 187365258 187365528 -63322326 + AluY SINE Alu 1 283 -28 288 102 0 0 chr2 187365528 187365577 -63322277 + (TTAAA)n Simple_repeat Simple_repeat 3 51 0 15454 187 52 35 chr2 187365577 187366170 -63321684 - L1PA13 LINE L1 -689 6125 5544 2141 118 10 51 chr2 187366170 187366351 -63321503 + THE1C LTR MaLR 3 161 -214 1975 123 0 30 chr2 187366351 187366675 -63321179 + AluSx SINE Alu 2 312 0 2141 118 10 51 chr2 187366675 187366882 -63320972 + THE1C LTR MaLR 161 375 0 15454 187 52 35 chr2 187366882 187371026 -63316828 - L1PA13 LINE L1 -1270 5544 1275 1374 273 57 29 chr2 187371015 187371400 -63316454 - L1PA13 LINE L1 -5750 1037 642 * 2816 153 26 0 chr2 187371502 187371960 -63315894 - L1PA13 LINE L1 -6317 470 1 23 0 0 0 chr2 187373407 187373430 -63314424 + AT_rich Low_complexity Low_complexity 1 23 0 291 254 28 0 chr2 187374166 187374194 -63313660 + MER3 DNA MER1_type 18 47 -162 654 199 78 37 chr2 187374194 187374385 -63313469 - MER3 DNA MER1_type 0 209 11 27 0 0 0 chr2 187374666 187374693 -63313161 + AT_rich Low_complexity Low_complexity 1 27 0 366 129 0 0 chr2 187375228 187375290 -63312564 + (GA)n Simple_repeat Simple_repeat 1 62 0 329 274 102 18 chr2 187375640 187375983 -63311871 + L1ME LINE L1 1175 1546 -4984 22 0 0 0 chr2 187376066 187376088 -63311766 + AT_rich Low_complexity Low_complexity 1 22 0 613 344 75 42 chr2 187376097 187376498 -63311356 + L1ME LINE L1 1732 2145 -4576 5503 155 11 10 chr2 187376555 187377602 -63310252 + L1PA16 LINE L1 5105 6157 -9 396 0 0 0 chr2 187377645 187377689 -63310165 + (TA)n Simple_repeat Simple_repeat 1 44 0 1394 279 74 39 chr2 187377698 187378335 -63309519 + MER76 LTR ERV 1 659 -29 378 129 0 0 chr2 187378336 187378398 -63309456 + (TG)n Simple_repeat Simple_repeat 1 62 0 683 275 52 38 chr2 187378471 187378928 -63308926 + L1ME LINE L1 2479 2949 -3591 1055 294 103 45 chr2 187378958 187379325 -63308529 - L1ME3A LINE L1 -30 6140 5796 1874 151 3 3 chr2 187379325 187379624 -63308230 - AluJb SINE Alu -13 299 1 1055 294 103 45 chr2 187379624 187379829 -63308025 - L1ME3A LINE L1 -374 5796 5605 2101 127 0 3 chr2 187379829 187380136 -63307718 + AluSp SINE Alu 1 306 -7 1055 294 103 45 chr2 187380136 187380273 -63307581 - L1ME3A LINE L1 -565 5605 5402 2447 149 15 5 chr2 187380413 187380816 -63307038 - MSTA-int LTR MaLR -1170 410 4 1975 149 138 5 chr2 187380819 187381195 -63306659 - MSTA LTR MaLR 0 428 3 1598 230 31 47 chr2 187381466 187381979 -63305875 - MLT1D LTR MaLR 0 505 1 284 253 101 0 chr2 187382409 187382488 -63305366 + LTR10A LTR ERV1 13 99 -510 1692 136 194 12 chr2 187382515 187382839 -63305015 + LTR10A LTR ERV1 227 609 0 530 179 8 34 chr2 187382953 187383070 -63304784 - L1MA10 LINE L1 0 6334 6221 2021 143 0 13 chr2 187383114 187383421 -63304433 - AluSq SINE Alu -10 303 1 214 213 293 0 chr2 187383624 187383699 -63304155 + L2 LINE L2 2272 2368 -946 203 396 47 24 chr2 187383905 187384074 -63303780 - L2 LINE L2 0 3272 3100 581 321 33 5 chr2 187384246 187384430 -63303424 + MIR SINE MIR 5 193 -69 427 272 34 128 chr2 187386609 187386874 -63300980 + MIR SINE MIR 23 262 0 273 212 53 99 chr2 187387145 187387296 -63300558 - MIR SINE MIR 0 262 119 227 176 39 0 chr2 187387320 187387371 -63300483 + (TA)n Simple_repeat Simple_repeat 1 53 0 308 116 101 0 chr2 187388051 187388120 -63299734 - L1MA2 LINE L1 0 6304 6229 2804 131 41 54 chr2 187388120 187388794 -63299060 - L1MA2 LINE L1 -48 6256 4288 * 11169 177 25 11 chr2 187388787 187389753 -63298101 - L1M1 LINE L1 -543 7180 6228 396 0 0 0 chr2 187389753 187389797 -63298057 + (TG)n Simple_repeat Simple_repeat 2 45 0 11169 177 25 11 chr2 187389797 187391607 -63296247 - L1M1 LINE L1 -1495 6228 4363 601 139 65 116 chr2 187391607 187391822 -63296032 - L1M1 LINE L1 -7340 225 22 201 233 0 0 chr2 187392229 187392272 -63295582 + CT-rich Low_complexity Low_complexity 2 44 0 249 108 0 0 chr2 187392275 187392312 -63295542 + (CA)n Simple_repeat Simple_repeat 1 37 0 24 0 0 0 chr2 187393464 187393488 -63294366 + AT_rich Low_complexity Low_complexity 1 24 0 407 322 62 18 chr2 187393657 187393884 -63293970 + L1MC/D LINE L1 5542 5778 -2030 2618 219 30 22 chr2 187393936 187394733 -63293121 + L1ME4a LINE L1 5155 5979 -142 198 143 0 0 chr2 187394852 187394887 -63292967 + (TG)n Simple_repeat Simple_repeat 1 35 0 180 0 0 0 chr2 187395785 187395805 -63292049 + (T)n Simple_repeat Simple_repeat 1 20 0 2760 3 0 0 chr2 187396384 187396685 -63291169 - AluY SINE Alu -10 301 1 269 305 85 18 chr2 187396721 187396885 -63290969 + LTR33A LTR ERVL 332 506 -17 452 255 9 0 chr2 187397854 187397960 -63289894 + MIR SINE MIR 33 139 -123 3645 226 40 15 chr2 187397961 187398656 -63289198 - L1P LINE L1 -970 5176 4500 1997 88 0 0 chr2 187398656 187398929 -63288925 - L1PA5 LINE L1 -2 6152 5880 3645 226 40 15 chr2 187398929 187399003 -63288851 - L1P LINE L1 -1646 4500 4429 426 20 0 0 chr2 187399003 187399054 -63288800 + (TG)n Simple_repeat Simple_repeat 2 52 0 3645 226 40 15 chr2 187399054 187399240 -63288614 - L1P LINE L1 -1717 4429 4196 4682 167 34 30 chr2 187399251 187399390 -63288464 + L1PA16 LINE L1 5240 5377 -789 2594 84 92 12 chr2 187399390 187399805 -63288049 - LTR7 LTR ERV1 -2 448 1 2004 201 26 79 chr2 187399805 187400383 -63287471 + MLT2B3 LTR ERVL 3 554 0 4682 167 34 30 chr2 187400383 187401156 -63286698 + L1PA16 LINE L1 5376 6156 -10 277 211 18 0 chr2 187401201 187401258 -63286596 + MIR SINE MIR 191 248 -14 207 100 0 0 chr2 187401261 187401291 -63286563 + (TTA)n Simple_repeat Simple_repeat 1 30 0 496 319 115 55 chr2 187402163 187402527 -63285327 - LTR16A LTR ERVL -11 439 54 258 32 0 0 chr2 187402669 187402700 -63285154 + (GA)n Simple_repeat Simple_repeat 1 31 0 21 71 0 0 chr2 187403057 187403099 -63284755 + AT_rich Low_complexity Low_complexity 1 42 0 365 292 104 91 chr2 187403742 187404368 -63283486 - L1ME4a LINE L1 -48 6073 5440 245 236 134 8 chr2 187404386 187404513 -63283341 - L1ME4a LINE L1 -731 5431 5289 395 294 93 86 chr2 187405734 187406411 -63281443 - L1ME4a LINE L1 -1343 4803 4122 252 0 0 0 chr2 187407777 187407805 -63280049 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1725 135 7 64 chr2 187407805 187408101 -63279753 - AluSx SINE Alu -32 280 2 216 0 0 0 chr2 187408417 187408441 -63279413 + (TG)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr2 187409770 187409799 -63278055 + AT_rich Low_complexity Low_complexity 1 29 0 3294 165 53 19 chr2 187409901 187410633 -63277221 - L1MC2 LINE L1 0 6344 5588 21 0 0 0 chr2 187411452 187411473 -63276381 + AT_rich Low_complexity Low_complexity 1 21 0 551 301 55 6 chr2 187411935 187412118 -63275736 - MIR SINE MIR -8 254 63 4013 166 27 13 chr2 187412194 187413984 -63273870 + L1MA6 LINE L1 4124 6016 -284 2021 185 34 32 chr2 187413995 187414543 -63273311 + MLT2A2 LTR ERVL 2 554 0 1201 177 56 0 chr2 187414543 187414809 -63273045 + L1MA8 LINE L1 6006 6286 -5 34 72 0 0 chr2 187414975 187415044 -63272810 + AT_rich Low_complexity Low_complexity 1 69 0 31 68 0 0 chr2 187415418 187415477 -63272377 + AT_rich Low_complexity Low_complexity 1 59 0 22 0 0 0 chr2 187416018 187416040 -63271814 + AT_rich Low_complexity Low_complexity 1 22 0 1909 129 6 28 chr2 187416084 187416428 -63271426 - AluY SINE Alu 0 337 1 856 203 42 0 chr2 187416803 187417020 -63270834 + L1P LINE L1 5112 5337 -809 318 344 98 18 chr2 187418588 187418812 -63269042 + MIR SINE MIR 11 252 -10 273 244 67 92 chr2 187420246 187420365 -63267489 + MER5B DNA MER1_type 26 141 -37 24 0 0 0 chr2 187420467 187420491 -63267363 + AT_rich Low_complexity Low_complexity 1 24 0 45 34 0 0 chr2 187420792 187420851 -63267003 + AT_rich Low_complexity Low_complexity 1 59 0 24 0 0 0 chr2 187420886 187420910 -63266944 + AT_rich Low_complexity Low_complexity 1 24 0 32 26 0 0 chr2 187421056 187421095 -63266759 + AT_rich Low_complexity Low_complexity 1 39 0 637 53 21 11 chr2 187421263 187421357 -63266497 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 2015 93 0 36 chr2 187421362 187421641 -63266213 - AluSc SINE Alu -31 278 10 321 210 0 16 chr2 187422214 187422276 -63265578 - MLT1D LTR MaLR -444 61 1 283 266 105 19 chr2 187422825 187422962 -63264892 - MER5B DNA MER1_type -26 163 7 202 167 33 0 chr2 187423742 187423802 -63264052 + (TA)n Simple_repeat Simple_repeat 2 63 0 1686 214 23 15 chr2 187424443 187424836 -63263018 - MSTD LTR MaLR 0 396 1 575 222 57 89 chr2 187425303 187425618 -63262236 + MER46C DNA MER2_type 17 321 -17 23 97 0 0 chr2 187426252 187426324 -63261530 + AT_rich Low_complexity Low_complexity 1 72 0 6485 73 26 4 chr2 187426358 187427393 -63260461 - L1PA8 LINE L1 0 6172 5131 4438 121 3 1 chr2 187427393 187428060 -63259794 + L1P LINE L1 3322 3989 -2157 461 264 155 27 chr2 187429027 187429175 -63258679 - MER5A DNA MER1_type -7 182 16 433 250 10 29 chr2 187429243 187429347 -63258507 - MER5B DNA MER1_type -73 105 4 216 0 0 0 chr2 187430601 187430625 -63257229 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2052 158 58 62 chr2 187430654 187431123 -63256731 - MLT1C LTR MaLR 0 467 1 497 306 155 5 chr2 187431269 187431320 -63256534 - MIR SINE MIR -12 250 208 1522 203 56 9 chr2 187431320 187431641 -63256213 - MER1B DNA MER1_type 0 337 2 497 306 155 5 chr2 187431641 187431795 -63256059 - MIR SINE MIR -54 208 14 317 373 36 0 chr2 187435245 187435355 -63252499 + MIR SINE MIR 13 126 -136 310 379 15 25 chr2 187438714 187438917 -63248937 + HAL1b LINE L1 387 587 -761 394 320 73 0 chr2 187438956 187439106 -63248748 - LTR16A LTR ERVL -5 445 285 318 349 80 54 chr2 187439447 187440000 -63247854 - HERV16 LTR ERVL -1713 3941 3375 801 255 77 105 chr2 187440181 187440573 -63247281 - MLT1B LTR MaLR 0 390 10 257 275 0 33 chr2 187440603 187440694 -63247160 - HERV16 LTR ERVL -3242 1781 1694 369 330 9 0 chr2 187441426 187441535 -63246319 - HERV16 LTR ERVL -2995 2001 1892 901 246 106 27 chr2 187441757 187442087 -63245767 - MLT1A1 LTR MaLR 0 365 10 8976 93 5 1 chr2 187442134 187443390 -63244464 - L1P3 LINE L1 -1366 4780 3520 4040 98 12 5 chr2 187443381 187444160 -63243694 + L1P3 LINE L1 4771 5556 -598 * 201 39 0 0 chr2 187494164 187494190 -63193664 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 25 65 0 0 chr2 187494265 187494311 -63193543 + AT_rich Low_complexity Low_complexity 1 46 0 23 54 0 0 chr2 187495492 187495529 -63192325 + AT_rich Low_complexity Low_complexity 1 37 0 200 345 159 0 chr2 187495767 187495880 -63191974 - L2 LINE L2 -5 3267 3137 473 298 105 52 chr2 187496936 187497184 -63190670 + MIR SINE MIR 2 262 0 250 364 118 18 chr2 187498459 187498687 -63189167 + MIR SINE MIR 12 262 0 22 80 0 0 chr2 187500312 187500362 -63187492 + AT_rich Low_complexity Low_complexity 1 50 0 426 260 81 0 chr2 187500507 187500630 -63187224 - MIR SINE MIR -58 204 72 2581 185 25 18 chr2 187500631 187501140 -63186714 - MER6A DNA MER2_type 0 605 93 537 185 265 13 chr2 187501641 187501792 -63186062 - MER5A DNA MER1_type 0 189 1 186 271 21 21 chr2 187502499 187502547 -63185307 + L2 LINE L2 3251 3298 -15 11090 28 0 0 chr2 187502621 187504699 -63183155 - L1PA4 LINE L1 -3 6152 4071 1476 190 66 37 chr2 187506041 187506420 -63181434 - L1MA10 LINE L1 -12 6322 5933 675 251 192 0 chr2 187506417 187506724 -63181130 + L1MC/D LINE L1 2676 3041 -3105 * 1427 181 64 21 chr2 187506728 187507010 -63180844 + AluJo SINE Alu 3 296 -16 426 317 68 26 chr2 187507168 187507585 -63180269 + L1MC/D LINE L1 5045 5321 -825 218 197 214 60 chr2 187508090 187508207 -63179647 + MIR SINE MIR 121 255 -7 1078 281 48 77 chr2 187508782 187509344 -63178510 + MLT1H1 LTR MaLR 1 546 -9 467 366 84 5 chr2 187509365 187509556 -63178298 - LTR16C LTR ERVL -134 357 152 25 51 0 0 chr2 187509737 187509776 -63178078 + AT_rich Low_complexity Low_complexity 1 39 0 832 230 8 75 chr2 187510032 187510297 -63177557 + MIR SINE MIR 16 262 0 22 0 0 0 chr2 187512493 187512515 -63175339 + AT_rich Low_complexity Low_complexity 1 22 0 216 366 24 0 chr2 187513862 187513944 -63173910 - MIR SINE MIR -178 84 1 628 294 55 47 chr2 187514023 187514381 -63173473 + MLT1I LTR MaLR 46 381 -28 317 338 84 0 chr2 187514727 187514881 -63172973 - HAL1 LINE L1 -1166 1341 1175 235 244 0 0 chr2 187515050 187515095 -63172759 + AluJ/monomer SINE Alu 1 45 -257 1273 236 20 17 chr2 187515214 187515515 -63172339 + AluJb SINE Alu 1 302 0 22 0 0 0 chr2 187515516 187515538 -63172316 + AT_rich Low_complexity Low_complexity 1 22 0 1567 246 144 18 chr2 187516302 187516858 -63170996 - MLT1E2 LTR MaLR 0 626 1 404 269 0 0 chr2 187517383 187517487 -63170367 + U13 snRNA snRNA 1 104 0 240 278 37 56 chr2 187517523 187517631 -63170223 - L2 LINE L2 -814 2500 2395 759 286 34 29 chr2 187519742 187520116 -63167738 + LTR40b LTR ERVL 1 400 -62 300 148 56 62 chr2 187520376 187520538 -63167316 + (TTATA)n Simple_repeat Simple_repeat 5 165 0 180 181 71 0 chr2 187520751 187520878 -63166976 + (TA)n Simple_repeat Simple_repeat 2 137 0 26 0 0 0 chr2 187520888 187520914 -63166940 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 187520982 187521004 -63166850 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr2 187521242 187521284 -63166570 + AT_rich Low_complexity Low_complexity 1 42 0 31 92 0 0 chr2 187521704 187521791 -63166063 + AT_rich Low_complexity Low_complexity 1 87 0 22 94 0 0 chr2 187521963 187522027 -63165827 + AT_rich Low_complexity Low_complexity 1 64 0 25 51 0 0 chr2 187522232 187522271 -63165583 + AT_rich Low_complexity Low_complexity 1 39 0 1603 167 7 27 chr2 187522309 187522602 -63165252 + AluJo SINE Alu 5 291 -21 6128 173 37 36 chr2 187522615 187524919 -63162935 - L1MA4A LINE L1 0 7365 5068 6256 241 65 27 chr2 187525036 187528535 -63159319 - L1MA4A LINE L1 -2977 4231 799 29 0 0 0 chr2 187528771 187528800 -63159054 + AT_rich Low_complexity Low_complexity 1 29 0 326 295 186 0 chr2 187530312 187530441 -63157413 + MER5A DNA MER1_type 37 189 0 34 42 0 0 chr2 187531847 187531895 -63155959 + AT_rich Low_complexity Low_complexity 1 48 0 196 200 0 44 chr2 187532905 187532950 -63154904 - L3 LINE CR1 -109 1468 1426 253 226 0 0 chr2 187533327 187533380 -63154474 + LTR16B LTR ERVL 6 58 -406 686 307 34 8 chr2 187533473 187533740 -63154114 + LTR16B LTR ERVL 188 461 -3 283 211 0 35 chr2 187533963 187534020 -63153834 + Tigger5 DNA MER2_type 1 55 -2268 184 306 0 0 chr2 187536513 187536562 -63151292 - L2 LINE L2 0 3313 3265 200 310 18 80 chr2 187536634 187536747 -63151107 - L2 LINE L2 -182 3131 3026 657 327 96 33 chr2 187536887 187537345 -63150509 - L2 LINE L2 -308 3005 2521 275 285 85 15 chr2 187538217 187538347 -63149507 - MLT1H LTR MaLR -305 244 106 1886 211 22 128 chr2 187538563 187539240 -63148614 - MER77 LTR ERV1 0 605 1 231 36 0 0 chr2 187539361 187539389 -63148465 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 529 64 6 87 chr2 187539642 187539815 -63148039 + (TA)n Simple_repeat Simple_repeat 2 160 0 309 257 29 0 chr2 187539821 187539926 -63147928 + L1M4 LINE L1 4475 4582 -1564 4959 257 76 31 chr2 187539961 187540783 -63147071 - L1ME1 LINE L1 -5 6230 5446 6427 91 13 1 chr2 187540783 187542218 -63145636 - L1PA10 LINE L1 0 6168 4725 4959 257 76 31 chr2 187542218 187542440 -63145414 - L1ME1 LINE L1 -789 5446 5235 1928 149 3 3 chr2 187542440 187542735 -63145119 + AluSx SINE Alu 3 297 -15 4959 257 76 31 chr2 187542735 187543723 -63144131 - L1ME1 LINE L1 -1000 5235 4292 2411 118 16 11 chr2 187543723 187544096 -63143758 - THE1C LTR MaLR 0 375 1 4959 257 76 31 chr2 187544096 187544611 -63143243 - L1ME1 LINE L1 -1943 4292 3801 399 21 0 0 chr2 187544611 187544659 -63143195 + (TG)n Simple_repeat Simple_repeat 1 48 0 4959 257 76 31 chr2 187544659 187545281 -63142573 - L1ME1 LINE L1 -2434 3801 2914 1169 240 18 25 chr2 187545285 187545587 -63142267 + MSTD LTR MaLR 4 361 -35 6459 161 38 5 chr2 187545587 187546778 -63141076 + Tigger3b DNA MER2_type 1 1230 -1 1169 240 18 25 chr2 187546778 187546812 -63141042 + MSTD LTR MaLR 361 394 -2 225 309 63 8 chr2 187546812 187546938 -63140916 - L1ME1 LINE L1 -3296 2919 2787 21234 44 5 2 chr2 187546957 187549602 -63138252 - L1PA4 LINE L1 -3054 3092 442 18928 33 1 0 chr2 187549602 187552658 -63135196 + L1PA4 LINE L1 3094 6152 -3 2829 203 92 11 chr2 187552735 187553387 -63134467 - MER39 LTR ERV1 0 707 3 213 222 0 0 chr2 187553492 187553537 -63134317 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 410 305 57 14 chr2 187554325 187554466 -63133388 - MIR SINE MIR -92 170 24 24 0 0 0 chr2 187554595 187554619 -63133235 + AT_rich Low_complexity Low_complexity 1 24 0 31 44 0 0 chr2 187554644 187554689 -63133165 + AT_rich Low_complexity Low_complexity 1 45 0 300 260 6 61 chr2 187554715 187554896 -63132958 + L1M LINE L1 5254 5424 -2384 23 78 0 0 chr2 187555122 187555173 -63132681 + AT_rich Low_complexity Low_complexity 1 51 0 262 250 0 0 chr2 187555173 187555233 -63132621 - L1ME1 LINE L1 -6293 103 44 256 299 98 29 chr2 187555385 187555589 -63132265 + L1ME3A LINE L1 4978 5195 -951 * 2214 288 66 35 chr2 187555581 187556685 -63131169 + L1MD1 LINE L1 198 1335 -5228 1119 174 4 71 chr2 187556701 187556954 -63130900 - MER46A DNA MER2_type 0 236 1 596 318 78 53 chr2 187557000 187557268 -63130586 + L1MD1 LINE L1 1188 1471 -4913 2312 78 0 0 chr2 187557268 187557561 -63130293 + AluY SINE Alu 6 298 -13 596 318 78 53 chr2 187557561 187557688 -63130166 + L1MD1 LINE L1 1471 1593 -4791 339 320 87 0 chr2 187557685 187557835 -63130019 + L1MD1 LINE L1 1839 2001 -4562 * 1132 251 98 21 chr2 187557864 187558502 -63129352 + L1MD1 LINE L1 2245 2903 -3479 2112 220 64 97 chr2 187559208 187560096 -63127758 + L1MD1 LINE L1 5609 6467 -11 2063 117 4 0 chr2 187560120 187560439 -63127415 + AluSx SINE Alu 2 321 0 530 285 27 26 chr2 187561412 187561778 -63126076 + MER90 LTR ERV1 1 406 -169 1013 257 150 28 chr2 187561843 187562270 -63125584 + L1ME3A LINE L1 5661 6147 -23 455 313 94 29 chr2 187562579 187562854 -63125000 - LTR33 LTR ERVL -228 293 1 23 0 0 0 chr2 187563035 187563058 -63124796 + AT_rich Low_complexity Low_complexity 1 23 0 255 221 52 0 chr2 187563082 187563159 -63124695 + Charlie8 DNA MER1_type 387 467 -1950 3701 186 30 7 chr2 187563491 187564197 -63123657 - MER72 LTR ERV1 0 722 1 181 320 10 39 chr2 187564971 187565074 -63122780 + L3 LINE CR1 808 907 -670 835 182 0 55 chr2 187565832 187565997 -63121857 - AluJb SINE Alu -153 159 4 436 348 188 36 chr2 187566534 187567204 -63120650 - L2 LINE L2 -342 2972 2201 2196 97 0 0 chr2 187567299 187567578 -63120276 - AluSc SINE Alu -30 279 1 1140 213 17 0 chr2 187567878 187568113 -63119741 + LTR43 LTR ERV1 176 414 -188 275 288 36 54 chr2 187568132 187568243 -63119611 + MER41E LTR ERV1 354 462 -50 3004 199 80 32 chr2 187568357 187569248 -63118606 - MER106B DNA MER1_type -126 933 1 204 289 111 56 chr2 187571146 187571236 -63116618 + MIR SINE MIR 19 113 -95 31 44 0 0 chr2 187571299 187571344 -63116510 + AT_rich Low_complexity Low_complexity 1 45 0 1749 153 20 10 chr2 187571664 187571965 -63115889 - THE1C LTR MaLR 0 375 72 4873 117 21 65 chr2 187571967 187572827 -63115027 - LTR12 LTR ERV1 0 826 5 5839 124 10 10 chr2 187572833 187574216 -63113638 - HERV17 LTR ERV1 0 8399 504 1154 44 6 13 chr2 187574214 187574372 -63113482 - HERV17 LTR ERV1 -5156 1740 1584 * 1891 108 16 14 chr2 187574349 187574651 -63113203 - HERV17 LTR ERV1 -3380 4405 1266 1209 151 120 22 chr2 187574630 187574954 -63112900 - HERV17 LTR ERV1 -7577 1049 694 * 28345 97 12 17 chr2 187574930 187580170 -63107684 - HERV17 LTR ERV1 -1975 463 1 374 245 10 0 chr2 187580175 187580277 -63107577 - LTR30 LTR ERV1 -79 643 541 367 192 0 0 chr2 187580293 187580368 -63107486 - THE1C LTR MaLR -302 73 1 353 296 55 68 chr2 187580493 187580875 -63106979 - L1M4 LINE L1 -2955 3191 2815 1596 256 87 30 chr2 187581017 187581641 -63106213 + L1ME2 LINE L1 5482 6140 -24 237 292 50 25 chr2 187581717 187581837 -63106017 - HAL1b LINE L1 -895 453 331 1996 120 20 11 chr2 187582103 187582483 -63105371 + L1P4 LINE L1 5203 5585 -581 1005 202 55 19 chr2 187582487 187582744 -63105110 + L1MB8 LINE L1 5912 6177 -1 3684 149 60 0 chr2 187582752 187583404 -63104450 + L1PA16 LINE L1 5475 6165 -1 33 0 0 0 chr2 187583819 187583852 -63104002 + AT_rich Low_complexity Low_complexity 1 33 0 4053 230 9 5 chr2 187585190 187586231 -63101623 - L1PB1 LINE L1 -2255 3891 2847 6817 163 9 3 chr2 187586240 187588131 -63099723 + L1PB1 LINE L1 3891 5797 -354 315 0 0 0 chr2 187588131 187588166 -63099688 + (CA)n Simple_repeat Simple_repeat 1 35 0 6817 163 9 3 chr2 187588166 187588523 -63099331 + L1PB1 LINE L1 5797 6150 -1 36 0 0 0 chr2 187588523 187588559 -63099295 + AT_rich Low_complexity Low_complexity 1 36 0 1109 293 146 31 chr2 187591443 187592482 -63095372 + HAL1 LINE L1 745 1903 -604 1511 201 72 14 chr2 187592848 187593449 -63094405 - MER67C LTR ERV1 -6 704 1 22 0 0 0 chr2 187593626 187593648 -63094206 + AT_rich Low_complexity Low_complexity 1 22 0 216 295 0 0 chr2 187593993 187594054 -63093800 + (TA)n Simple_repeat Simple_repeat 2 62 0 819 191 0 10 chr2 187594459 187594634 -63093220 - MLT1A1-int LTR MaLR -1233 138 7 1665 207 43 6 chr2 187594641 187594993 -63092861 - MLT1A1 LTR MaLR 0 365 1 322 248 105 9 chr2 187595273 187595378 -63092476 - L2 LINE L2 0 3313 3199 281 109 0 0 chr2 187595383 187595429 -63092425 + MADE1 DNA Mariner 1 46 -34 22 35 0 0 chr2 187595474 187595503 -63092351 + AT_rich Low_complexity Low_complexity 1 29 0 304 257 53 107 chr2 187595666 187595872 -63091982 + LTR16A1 LTR ERVL 61 255 -202 279 174 0 0 chr2 187595905 187595951 -63091903 + LTR16C LTR ERVL 432 477 -14 486 296 56 0 chr2 187595960 187596102 -63091752 - L2 LINE L2 -336 2977 2828 22 0 0 0 chr2 187596625 187596647 -63091207 + AT_rich Low_complexity Low_complexity 1 22 0 1436 228 83 57 chr2 187597190 187597682 -63090172 - MLT1D LTR MaLR 0 505 1 306 282 13 13 chr2 187598275 187598353 -63089501 - MER45 DNA AcHobo -1467 114 37 280 259 28 46 chr2 187598604 187598712 -63089142 - MLT1K LTR MaLR -34 554 449 334 70 0 0 chr2 187599322 187599365 -63088489 + L1P4 LINE L1 5701 5743 -422 683 182 107 19 chr2 187600515 187600674 -63087180 - MER20 DNA MER1_type -45 174 2 181 227 23 0 chr2 187600685 187600729 -63087125 + MIR3 SINE MIR 162 206 -2 1803 186 42 0 chr2 187600776 187601110 -63086744 - MER7A DNA MER2_type 0 346 1 518 133 0 12 chr2 187601447 187601530 -63086324 - MIR3 SINE MIR -6 202 121 1687 188 3 14 chr2 187602258 187602551 -63085303 + AluJb SINE Alu 6 295 -17 2395 81 0 0 chr2 187603503 187603798 -63084056 + AluSc SINE Alu 1 295 -14 29 47 0 0 chr2 187604354 187604397 -63083457 + AT_rich Low_complexity Low_complexity 1 43 0 347 263 194 30 chr2 187604670 187604855 -63082999 + MLT1J1 LTR MaLR 1 208 -242 329 342 53 26 chr2 187605082 187605272 -63082582 - L2 LINE L2 -882 2432 2238 472 238 57 16 chr2 187605729 187605851 -63082003 + MER94 DNA DNA 8 134 0 2391 116 11 3 chr2 187607486 187607856 -63079998 - L1PB1 LINE L1 0 6867 6495 383 139 0 13 chr2 187607872 187607951 -63079903 + (TA)n Simple_repeat Simple_repeat 2 79 0 7933 186 20 5 chr2 187607952 187610204 -63077650 - L1PB1 LINE L1 -362 6505 4227 42318 40 22 2 chr2 187610243 187616271 -63071583 - L1PA3 LINE L1 -2 6153 1 5906 204 37 3 chr2 187616279 187617814 -63070040 - L1PB1 LINE L1 -2647 4215 2629 10327 125 22 59 chr2 187617817 187621547 -63066307 - L1PA7 LINE L1 0 6154 2766 299 0 73 0 chr2 187621547 187621588 -63066266 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 10327 125 22 59 chr2 187621588 187624245 -63063609 - L1PA7 LINE L1 -3388 2766 12 7082 193 55 5 chr2 187624254 187626625 -63061229 - L1PB1 LINE L1 -4224 2639 6 4224 203 83 35 chr2 187627139 187628637 -63059217 - MER52A LTR ERV1 0 1755 3 4299 193 30 14 chr2 187628992 187629317 -63058537 + L1MA8 LINE L1 5080 5398 -893 1393 174 73 103 chr2 187629317 187629725 -63058129 + MSTD LTR MaLR 1 396 0 4299 193 30 14 chr2 187629725 187630543 -63057311 + L1MA8 LINE L1 5398 6244 -47 1289 247 77 29 chr2 187630610 187631328 -63056526 - MER109 Unknown Unknown -1640 792 1 1326 221 128 69 chr2 187631432 187632070 -63055784 - MER109 Unknown Unknown -1206 1226 551 1488 175 46 36 chr2 187632878 187633181 -63054673 - AluJo SINE Alu -6 306 1 23 33 0 0 chr2 187633887 187633917 -63053937 + AT_rich Low_complexity Low_complexity 1 30 0 413 222 70 27 chr2 187636846 187637031 -63050823 - L1ME2 LINE L1 -185 5979 5787 466 217 0 17 chr2 187637034 187637149 -63050705 - L1ME2 LINE L1 -429 5735 5623 490 241 23 8 chr2 187637149 187637282 -63050572 + LTR41 LTR ERVL 1 135 -638 708 268 97 75 chr2 187637303 187637616 -63050238 + LTR41 LTR ERVL 337 663 -110 1700 174 150 5 chr2 187637616 187637990 -63049864 + MSTA LTR MaLR 1 428 0 708 268 97 75 chr2 187637990 187638101 -63049753 + LTR41 LTR ERVL 663 770 -3 2175 151 26 21 chr2 187638142 187638327 -63049527 - L1MA2 LINE L1 0 7723 7540 2189 93 10 3 chr2 187638327 187638618 -63049236 - AluSc SINE Alu -16 293 1 2175 151 26 21 chr2 187638618 187638855 -63048999 - L1MA2 LINE L1 -183 7540 7299 667 248 0 13 chr2 187638882 187639031 -63048823 + MER66B LTR ERV1 1 147 -339 737 142 24 0 chr2 187639047 187639174 -63048680 - L1MA2 LINE L1 -426 7298 7169 2573 184 11 4 chr2 187639174 187639631 -63048223 - MER66B LTR ERV1 0 486 27 13774 176 30 19 chr2 187639638 187642233 -63045621 - L1MA2 LINE L1 -551 7172 4497 2140 101 7 7 chr2 187642233 187642529 -63045325 - AluY SINE Alu -15 296 1 13774 176 30 19 chr2 187642529 187644627 -63043227 - L1MA2 LINE L1 -3226 4497 2425 13250 201 29 6 chr2 187644666 187649086 -63038768 + L1PB1 LINE L1 2244 6865 -2 542 290 71 102 chr2 187649231 187649848 -63038006 + MLT2E LTR ERVL 29 626 -2 692 270 54 29 chr2 187650590 187650794 -63037060 - MER58A DNA MER1_type -13 211 3 2033 121 3 23 chr2 187650841 187651148 -63036706 - AluSx SINE Alu -11 301 1 29 98 0 0 chr2 187652441 187652533 -63035321 + AT_rich Low_complexity Low_complexity 1 92 0 1828 152 37 14 chr2 187654112 187654409 -63033445 - AluJb SINE Alu -8 304 1 40 0 0 0 chr2 187654929 187654969 -63032885 + AT_rich Low_complexity Low_complexity 1 40 0 1625 117 0 0 chr2 187655024 187655237 -63032617 + AluSx SINE Alu 1 213 -99 878 240 37 32 chr2 187655240 187655457 -63032397 - L1MDb LINE L1 -6172 237 20 353 225 0 0 chr2 187655941 187656012 -63031842 + L2 LINE L2 3243 3313 0 2229 95 0 7 chr2 187656605 187656900 -63030954 + AluSg1 SINE Alu 1 293 -16 556 314 59 32 chr2 187656900 187657120 -63030734 + MIR SINE MIR 14 239 -23 494 300 110 46 chr2 187658471 187658713 -63029141 - L1ME LINE L1 -335 5786 5561 2472 194 36 71 chr2 187658713 187659347 -63028507 - LTR9 LTR ERV1 0 612 1 494 300 110 46 chr2 187659347 187659541 -63028313 - L1ME LINE L1 -560 5561 5322 1719 277 19 13 chr2 187660208 187660685 -63027169 + MER41E LTR ERV1 23 502 -10 317 272 166 55 chr2 187660713 187660930 -63026924 - L1ME LINE L1 -1289 4857 4617 292 243 58 10 chr2 187661047 187661150 -63026704 + L1M4 LINE L1 4751 4858 -1288 1894 286 87 36 chr2 187661157 187662150 -63025704 + L1M3e LINE L1 -720 322 -5984 2345 249 79 45 chr2 187662150 187662305 -63025549 + L1M3e LINE L1 979 1127 -5257 366 23 0 0 chr2 187662305 187662348 -63025506 + (CA)n Simple_repeat Simple_repeat 1 43 0 2345 249 79 45 chr2 187662348 187663824 -63024030 + L1M3e LINE L1 1127 2444 -3940 1552 264 36 38 chr2 187663831 187664551 -63023303 + L1M3e LINE L1 2692 3410 -2972 569 263 74 70 chr2 187664570 187665045 -63022809 - L1M1 LINE L1 -4085 3480 3004 * 2269 67 0 67 chr2 187665036 187665381 -63022473 - L1PA8A LINE L1 -450 5681 5360 4024 232 49 13 chr2 187665387 187666647 -63021207 + L1M3e LINE L1 3648 4953 -1429 1153 156 29 13 chr2 187666663 187667023 -63020831 + L1PA16 LINE L1 5336 5700 -690 2363 181 27 0 chr2 187667023 187667459 -63020395 + L1PA16 LINE L1 5941 6393 -9 409 280 35 94 chr2 187667507 187667793 -63020061 - L1M4 LINE L1 -2988 3158 2890 1541 226 31 14 chr2 187667805 187668164 -63019690 - MLT1A1 LTR MaLR 0 365 1 246 32 0 0 chr2 187668203 187668234 -63019620 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 22827 46 5 1 chr2 187668236 187672471 -63015383 - L1PA5 LINE L1 -6 6148 1890 5722 126 47 41 chr2 187672471 187673556 -63014298 + SVA Other Other 91 1386 -635 5722 108 46 56 chr2 187673556 187674562 -63013292 + SVA Other Other 391 1386 0 2498 123 19 7 chr2 187674566 187674703 -63013151 + L1M2 LINE L1 5352 5486 -814 2000 146 7 13 chr2 187674703 187675012 -63012842 + AluSx SINE Alu 1 307 -5 2498 123 19 7 chr2 187675012 187675306 -63012548 + L1M2 LINE L1 5486 5788 -512 13126 85 1 2 chr2 187675317 187677158 -63010696 - L1P LINE L1 -4304 1842 3 32 43 0 0 chr2 187677295 187677341 -63010513 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr2 187678272 187678295 -63009559 + AT_rich Low_complexity Low_complexity 1 23 0 441 270 94 13 chr2 187679932 187680091 -63007763 + MIR SINE MIR 20 191 -71 266 270 145 57 chr2 187680257 187680416 -63007438 + L2 LINE L2 1777 1949 -1365 512 357 161 22 chr2 187680418 187681283 -63006571 + L2 LINE L2 2066 3045 -227 564 192 6 28 chr2 187681554 187681564 -63006290 + (TA)n Simple_repeat Simple_repeat 2 11 -163 204 40 0 0 chr2 187681564 187681589 -63006265 + (CA)n Simple_repeat Simple_repeat 2 26 0 564 192 6 28 chr2 187681589 187681755 -63006099 + (TA)n Simple_repeat Simple_repeat 11 174 0 1673 162 63 39 chr2 187681927 187682291 -63005563 - THE1C LTR MaLR -2 373 1 9035 144 17 35 chr2 187682291 187683898 -63003956 - THE1C-int LTR MaLR 0 1580 3 1570 173 70 28 chr2 187683900 187684258 -63003596 - THE1C LTR MaLR 0 375 3 579 60 0 12 chr2 187684677 187684784 -63003070 - L1PA4 LINE L1 0 6155 6072 1838 159 47 3 chr2 187684791 187685087 -63002767 - AluSx SINE Alu -1 311 3 23 0 0 0 chr2 187685130 187685153 -63002701 + AT_rich Low_complexity Low_complexity 1 23 0 4760 164 37 127 chr2 187685159 187686071 -63001783 + L1PA16 LINE L1 3671 4664 -1502 2697 141 18 11 chr2 187686071 187686518 -63001336 + L1PA15 LINE L1 5715 6164 -1 4760 164 37 127 chr2 187686518 187686691 -63001163 + L1PA16 LINE L1 4664 4851 -1315 207 0 0 0 chr2 187686691 187686714 -63001140 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 4760 164 37 127 chr2 187686714 187687451 -63000403 + L1PA16 LINE L1 4851 5133 -1033 800 103 95 0 chr2 187687451 187687577 -63000277 + MER85 DNA T2_type 1 138 -1 4760 164 37 127 chr2 187687577 187688526 -62999328 + L1PA16 LINE L1 5133 6166 0 10050 80 17 7 chr2 187688534 187690714 -62997140 + L1PA7 LINE L1 3969 6148 -6 539 266 56 93 chr2 187690736 187691059 -62996795 - L1MC/D LINE L1 -2046 5762 5452 438 20 0 0 chr2 187691060 187691111 -62996743 + (TG)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr2 187691855 187691877 -62995977 + AT_rich Low_complexity Low_complexity 1 22 0 2492 196 85 42 chr2 187691882 187692406 -62995448 - L1MB7 LINE L1 -20 6975 6475 2358 107 19 25 chr2 187692406 187692772 -62995082 - THE1B LTR MaLR 0 364 1 2492 196 85 42 chr2 187692772 187692798 -62995056 - L1MB7 LINE L1 -520 6475 6452 2096 88 3 62 chr2 187692798 187693118 -62994736 - AluY SINE Alu -10 301 1 2492 196 85 42 chr2 187693118 187693410 -62994444 - L1MB7 LINE L1 -543 6452 6095 778 256 92 3 chr2 187693413 187693576 -62994278 - L1MB7 LINE L1 -990 5967 5820 1837 183 28 11 chr2 187693576 187693931 -62993923 + MLT1A1 LTR MaLR 5 365 0 778 256 92 3 chr2 187693931 187694072 -62993782 - L1MB7 LINE L1 -1137 5820 5636 2098 217 45 2 chr2 187694218 187694770 -62993084 - L1MB7 LINE L1 -2220 4737 4162 841 209 71 9 chr2 187694770 187694981 -62992873 - L1MB7 LINE L1 -6635 224 1 509 262 9 0 chr2 187695612 187695719 -62992135 + MER5B DNA MER1_type 65 172 -6 388 264 0 23 chr2 187695717 187695804 -62992050 + MER5A DNA MER1_type 12 96 -93 * 707 226 21 58 chr2 187695860 187696050 -62991804 - MER5A DNA MER1_type 0 189 7 369 0 0 0 chr2 187696618 187696659 -62991195 + (TG)n Simple_repeat Simple_repeat 1 41 0 348 232 184 16 chr2 187697795 187697920 -62989934 + L3 LINE CR1 1242 1387 -190 242 348 95 6 chr2 187697916 187698074 -62989780 + MIR SINE MIR 7 178 -84 * 180 369 63 9 chr2 187698337 187698448 -62989406 + L2 LINE L2 3156 3272 0 12697 139 54 17 chr2 187698557 187700885 -62986969 + Tigger1 DNA MER2_type 2 2414 -4 261 312 121 17 chr2 187702260 187702433 -62985421 - MIR3 SINE MIR -2 206 16 24 0 0 0 chr2 187703557 187703581 -62984273 + AT_rich Low_complexity Low_complexity 1 24 0 2019 120 22 155 chr2 187703910 187704401 -62983453 + MSTA LTR MaLR 1 426 -2 295 253 20 0 chr2 187704555 187704654 -62983200 + (TA)n Simple_repeat Simple_repeat 1 101 0 21 71 0 0 chr2 187705405 187705447 -62982407 + AT_rich Low_complexity Low_complexity 1 42 0 408 232 84 0 chr2 187707302 187707397 -62980457 - MER91C DNA MER1_type -37 103 1 257 375 62 0 chr2 187707571 187707683 -62980171 + MIR3 SINE MIR 38 156 -52 5392 157 39 12 chr2 187708052 187709701 -62978153 - L1PB2 LINE L1 -8 6143 4452 10634 40 1 3 chr2 187709801 187711213 -62976641 - L1P LINE L1 -2328 3818 2410 7781 102 12 7 chr2 187711331 187712540 -62975314 - L1P LINE L1 -4929 1217 3 1332 256 29 38 chr2 187712727 187712958 -62974896 + L1M3e LINE L1 912 1143 -5170 1799 153 11 11 chr2 187712958 187713270 -62974584 - AluSq SINE Alu 0 312 1 1332 256 29 38 chr2 187713270 187713902 -62973952 + L1M3e LINE L1 1143 1794 -4519 2604 193 22 3 chr2 187714102 187714703 -62973151 - L1PB2 LINE L1 -1862 4284 3673 211 294 15 15 chr2 187714767 187714835 -62973019 + MIR SINE MIR 117 184 -78 203 211 39 19 chr2 187714884 187714936 -62972918 + MIR SINE MIR 192 244 -18 228 86 0 0 chr2 187715022 187715057 -62972797 + (T)n Simple_repeat Simple_repeat 1 35 0 859 308 20 4 chr2 187715278 187715531 -62972323 - MIR SINE MIR -5 257 1 1843 159 27 7 chr2 187715703 187716004 -62971850 + AluJo SINE Alu 6 312 0 256 266 0 37 chr2 187716052 187716133 -62971721 + MLT1I LTR MaLR 84 146 -263 519 163 107 107 chr2 187717581 187717759 -62970095 - MER5B DNA MER1_type 0 178 1 545 300 38 0 chr2 187717778 187717938 -62969916 - MER5B DNA MER1_type -5 173 8 725 179 0 8 chr2 187719801 187719918 -62967936 + FLAM_C SINE Alu 1 116 -27 249 33 0 0 chr2 187720662 187720692 -62967162 + (T)n Simple_repeat Simple_repeat 1 30 0 490 178 0 28 chr2 187721006 187721113 -62966741 - MLT1A1 LTR MaLR -259 106 3 285 253 93 0 chr2 187721777 187721852 -62966002 + L2 LINE L2 3229 3310 -3 267 299 103 0 chr2 187722515 187722622 -62965232 - LTR67 LTR ERVL -12 545 428 2208 54 0 14 chr2 187722897 187723177 -62964677 + AluY SINE Alu 36 311 0 472 291 140 31 chr2 187723328 187723685 -62964169 - L1MC4a LINE L1 -1903 5905 5510 570 293 53 45 chr2 187724828 187725074 -62962780 + MIR SINE MIR 6 253 -9 414 330 113 6 chr2 187726439 187726638 -62961216 - MIR SINE MIR -10 252 34 9481 29 3 0 chr2 187726686 187728598 -62959256 - L1PA3 LINE L1 -3 6152 4243 4089 32 8 0 chr2 187728598 187729090 -62958764 + L1PA3 LINE L1 3742 4237 -1909 366 176 122 0 chr2 187731150 187731224 -62956630 - MER45A DNA AcHobo -47 131 49 361 169 34 56 chr2 187731480 187731569 -62956285 - L2 LINE L2 0 3313 3227 1615 168 0 72 chr2 187731862 187732196 -62955658 - AluJo SINE Alu -2 310 1 254 325 9 9 chr2 187732413 187732527 -62955327 + L1MC4a LINE L1 4908 5021 -1125 1522 209 3 7 chr2 187732528 187732825 -62955029 + AluJo SINE Alu 1 296 -16 182 160 64 11 chr2 187733020 187733114 -62954740 + (TA)n Simple_repeat Simple_repeat 1 99 0 1029 274 128 28 chr2 187733196 187733672 -62954182 + L1MC4a LINE L1 5277 5821 -1987 1884 150 36 6 chr2 187733672 187734031 -62953823 + L1PA16 LINE L1 5797 6166 0 1029 274 128 28 chr2 187734031 187734124 -62953730 + L1MC4a LINE L1 5821 5903 -1905 777 211 69 6 chr2 187734550 187734725 -62953129 - L1MD2 LINE L1 -12 6347 6162 207 0 0 0 chr2 187734725 187734748 -62953106 + (TG)n Simple_repeat Simple_repeat 2 24 0 422 252 70 49 chr2 187734749 187734892 -62952962 - L1MD2 LINE L1 -229 6130 5985 1767 250 79 47 chr2 187734900 187735075 -62952779 - L1PA5 LINE L1 0 6154 5980 2869 190 46 56 chr2 187735075 187735112 -62952742 - L1MD2 LINE L1 -409 5950 5914 1983 94 7 65 chr2 187735112 187735419 -62952435 + AluSq SINE Alu 1 289 -24 2869 190 46 56 chr2 187735419 187736054 -62951800 - L1MD2 LINE L1 -445 5914 5275 2294 62 0 10 chr2 187736054 187736372 -62951482 - AluY SINE Alu 0 315 1 2869 190 46 56 chr2 187736372 187737035 -62950819 - L1MD2 LINE L1 -1084 5275 4606 965 275 75 0 chr2 187737231 187737511 -62950343 + L1MC4a LINE L1 6623 6923 -885 250 306 18 9 chr2 187737715 187737826 -62950028 + L1MC4 LINE L1 7161 7272 -770 556 194 82 79 chr2 187737829 187738225 -62949629 + MLT1D LTR MaLR 1 505 0 1177 289 62 20 chr2 187738444 187738894 -62948960 - L2 LINE L2 -883 2431 1963 530 255 150 48 chr2 187738941 187739358 -62948496 - L1ME3A LINE L1 -301 5869 5409 2021 119 4 0 chr2 187739501 187739779 -62948075 + AluSg SINE Alu 1 279 -31 305 200 29 0 chr2 187739817 187739887 -62947967 - L1ME3A LINE L1 -858 5288 5217 272 313 61 61 chr2 187739987 187740134 -62947720 + MIR SINE MIR 116 262 0 717 224 31 0 chr2 187741296 187741310 -62946544 - L1MA10 LINE L1 0 6334 6321 693 267 46 15 chr2 187741310 187741505 -62946349 - L1ME1 LINE L1 -5 6659 6459 284 282 27 55 chr2 187741601 187741711 -62946143 + ERVL LTR ERVL 1492 1598 -4166 587 319 85 19 chr2 187741882 187742142 -62945712 + ERVL LTR ERVL 2326 2602 -3162 1014 355 31 4 chr2 187742186 187742779 -62945075 + ERVL LTR ERVL 2657 3321 -2021 487 267 124 0 chr2 187742845 187743006 -62944848 - MER63A DNA MER1_type -29 181 1 309 325 18 24 chr2 187743024 187743193 -62944661 - HERVL LTR ERVL -2144 3510 3343 1869 144 0 84 chr2 187743431 187743812 -62944042 + MER4A LTR ERV1 1 349 -315 355 210 35 15 chr2 187743782 187743906 -62943948 + MER4C LTR ERV1 167 403 -261 * 1961 122 4 0 chr2 187743948 187744227 -62943627 - AluSx SINE Alu -32 280 1 481 201 28 117 chr2 187744270 187744449 -62943405 + MER4C LTR ERV1 277 439 -26 468 318 63 47 chr2 187744498 187744863 -62942991 + ERVL LTR ERVL 4707 5077 -687 444 173 0 12 chr2 187744865 187744946 -62942908 - MLT1A1 LTR MaLR -285 80 1 998 192 86 4 chr2 187744950 187745184 -62942670 - L1ME1 LINE L1 -280 6380 6128 3104 162 49 73 chr2 187745191 187745407 -62942447 + LTR8A LTR ERV1 30 250 -477 3237 148 11 21 chr2 187745407 187745939 -62941915 - MER1A DNA MER1_type 0 527 1 3104 162 49 73 chr2 187745939 187746201 -62941653 + LTR8A LTR ERV1 250 488 -239 670 104 9 0 chr2 187746201 187746307 -62941547 - L1PB1 LINE L1 -1 6150 6044 3104 162 49 73 chr2 187746307 187746542 -62941312 + LTR8A LTR ERV1 488 727 0 275 278 113 0 chr2 187746555 187746670 -62941184 - L1ME1 LINE L1 -557 6103 5976 262 277 125 0 chr2 187746728 187746840 -62941014 - L1ME1 LINE L1 -4413 2412 2287 337 304 31 46 chr2 187746846 187747040 -62940814 - L1ME1 LINE L1 -4578 2247 2057 1598 156 42 0 chr2 187747081 187747370 -62940484 - L1MB7 LINE L1 -25 6159 5859 1488 227 32 61 chr2 187747373 187747813 -62940041 - L1ME1 LINE L1 -5618 924 498 1794 252 98 22 chr2 187747852 187748705 -62939149 - L1M4 LINE L1 -974 5172 4255 422 271 17 77 chr2 187748750 187748991 -62938863 - L1M4 LINE L1 -1977 4169 3944 304 297 40 10 chr2 187749359 187749460 -62938394 - MER103 DNA DNA -43 123 20 1976 146 0 7 chr2 187749830 187750124 -62937730 + AluSx SINE Alu 1 292 -20 1760 216 26 10 chr2 187750371 187750759 -62937095 - MSTD LTR MaLR 0 396 3 2418 171 28 17 chr2 187750858 187751320 -62936534 - MLT1C LTR MaLR 0 467 1 307 312 65 19 chr2 187752185 187752339 -62935515 + MIR SINE MIR 28 188 -74 604 360 20 16 chr2 187752340 187752593 -62935261 + L2 LINE L2 2569 2822 -492 189 254 0 63 chr2 187752976 187753039 -62934815 + L2 LINE L2 3255 3313 0 449 294 0 53 chr2 187754007 187754194 -62933660 + MER5B DNA MER1_type 2 178 0 21 0 0 0 chr2 187754822 187754843 -62933011 + AT_rich Low_complexity Low_complexity 1 21 0 198 71 0 0 chr2 187756366 187756394 -62931460 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 383 266 27 11 chr2 187756442 187756589 -62931265 + L1ME LINE L1 5533 5682 -439 1209 241 186 7 chr2 187756642 187757218 -62930636 + L1MC/D LINE L1 4915 5610 -573 * 1373 226 132 0 chr2 187757216 187757619 -62930235 + L1MD3 LINE L1 7540 7995 0 2325 100 0 0 chr2 187757631 187757941 -62929913 + AluSg SINE Alu 1 310 0 1561 127 109 0 chr2 187757964 187758239 -62929615 + AluSx SINE Alu 1 305 -7 16024 167 50 58 chr2 187758554 187761954 -62925900 + L1M1 LINE L1 8 3381 -4184 1930 145 50 39 chr2 187761954 187762312 -62925542 - THE1B LTR MaLR -2 362 1 16024 167 50 58 chr2 187762312 187762450 -62925404 + L1M1 LINE L1 3381 3519 -4046 24 67 0 0 chr2 187762467 187762512 -62925342 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr2 187763299 187763320 -62924534 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr2 187766668 187766702 -62921152 + (TG)n Simple_repeat Simple_repeat 2 35 0 908 123 80 12 chr2 187766705 187766868 -62920986 - Tigger3(Golem) DNA MER2_type -1 3028 2855 297 340 108 41 chr2 187767058 187767326 -62920528 + L2 LINE L2 2692 2977 -337 185 105 0 26 chr2 187769903 187769941 -62917913 + (GA)n Simple_repeat Simple_repeat 2 38 0 307 227 0 45 chr2 187770032 187770098 -62917756 - LTR8 LTR ERV1 0 691 629 2610 26 3 3 chr2 187772543 187772852 -62915002 + AluYb8 SINE Alu 1 309 -9 204 340 63 25 chr2 187772902 187773061 -62914793 - L2 LINE L2 -1030 2284 2120 32 57 0 0 chr2 187773409 187773462 -62914392 + AT_rich Low_complexity Low_complexity 1 53 0 28 0 0 0 chr2 187774122 187774150 -62913704 + AT_rich Low_complexity Low_complexity 1 28 0 1984 120 0 0 chr2 187774259 187774535 -62913319 - AluSx SINE Alu -36 276 1 252 130 0 0 chr2 187774922 187774968 -62912886 - LTR66 LTR ERVL -171 439 394 252 130 0 0 chr2 187774930 187774976 -62912878 + LTR66 LTR ERVL 394 439 -171 21 57 0 0 chr2 187775481 187775516 -62912338 + AT_rich Low_complexity Low_complexity 1 35 0 24 77 0 0 chr2 187775846 187775898 -62911956 + AT_rich Low_complexity Low_complexity 1 52 0 787 123 0 91 chr2 187776091 187776245 -62911609 + L1PA10 LINE L1 6027 6166 -2 2273 78 0 38 chr2 187776311 187776631 -62911223 + AluY SINE Alu 1 308 -3 247 255 38 0 chr2 187776661 187776767 -62911087 + (TA)n Simple_repeat Simple_repeat 2 111 0 221 329 14 0 chr2 187777051 187777124 -62910730 + MIR SINE MIR 172 245 -17 2120 140 7 59 chr2 187777202 187777464 -62910390 - L1PB4 LINE L1 0 6156 5882 279 0 0 0 chr2 187777464 187777495 -62910359 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2120 140 7 59 chr2 187777495 187777507 -62910347 - L1PB4 LINE L1 -274 5882 5871 207 0 0 0 chr2 187777507 187777530 -62910324 + (TGG)n Simple_repeat Simple_repeat 1 23 0 1925 120 7 0 chr2 187777530 187777814 -62910040 - AluSx SINE Alu -26 286 1 2120 140 7 59 chr2 187777814 187777943 -62909911 - L1PB4 LINE L1 -283 5873 5772 6572 199 55 7 chr2 187777944 187780323 -62907531 - L1PA16 LINE L1 -3 6163 3682 22 35 0 0 chr2 187781724 187781753 -62906101 + AT_rich Low_complexity Low_complexity 1 29 0 27 29 0 0 chr2 187781795 187781829 -62906025 + AT_rich Low_complexity Low_complexity 1 34 0 23 78 0 0 chr2 187782452 187782503 -62905351 + AT_rich Low_complexity Low_complexity 1 51 0 370 271 76 80 chr2 187782564 187782815 -62905039 + L2 LINE L2 3032 3281 -32 629 228 119 33 chr2 187782943 187783222 -62904632 - L1 LINE L1 -3798 3767 3463 * 2269 270 29 51 chr2 187783201 187784187 -62903667 - L1 LINE L1 -4178 3388 2316 1792 153 7 10 chr2 187784187 187784500 -62903354 + AluSq SINE Alu 1 312 0 2269 270 29 51 chr2 187784500 187784761 -62903093 - L1 LINE L1 -5250 2316 2051 197 333 12 48 chr2 187785556 187785640 -62902214 - L2 LINE L2 -2 3311 3231 546 255 215 10 chr2 187787892 187788092 -62899762 + MIR SINE MIR 15 255 -7 186 103 0 0 chr2 187788151 187788180 -62899674 + (TAG)n Simple_repeat Simple_repeat 2 30 0 1150 193 20 118 chr2 187788803 187789208 -62898646 + MLT1A1 LTR MaLR 1 365 0 268 220 0 0 chr2 187789265 187789315 -62898539 - Charlie8 DNA MER1_type 0 2417 2368 18281 166 49 27 chr2 187789966 187793012 -62894842 + L1MA2 LINE L1 28 3006 -4717 276 86 0 0 chr2 187793012 187793047 -62894807 - U2 snRNA snRNA -153 35 1 18281 166 49 27 chr2 187793047 187797495 -62890359 + L1MA2 LINE L1 3006 7723 0 22 80 0 0 chr2 187797495 187797545 -62890309 + AT_rich Low_complexity Low_complexity 1 50 0 48 53 0 0 chr2 187797749 187797825 -62890029 + AT_rich Low_complexity Low_complexity 1 76 0 4646 83 0 2 chr2 187797882 187798509 -62889345 - L1PA8 LINE L1 -2 6170 5545 2021 130 44 39 chr2 187798857 187799219 -62888635 + THE1B LTR MaLR 1 364 0 1697 246 38 38 chr2 187799278 187799774 -62888080 - MLT1D LTR MaLR -7 498 3 432 72 96 0 chr2 187800337 187800462 -62887392 + (TA)n Simple_repeat Simple_repeat 2 138 0 1708 274 67 5 chr2 187800465 187801260 -62886594 + L1ME3 LINE L1 5223 6110 -52 2248 109 3 0 chr2 187801270 187801573 -62886281 + AluSx SINE Alu 1 304 -8 517 313 69 30 chr2 187801728 187802443 -62885411 - L1MEd LINE L1 -4576 1734 942 189 0 0 0 chr2 187802515 187802536 -62885318 + (TG)n Simple_repeat Simple_repeat 2 22 0 360 156 64 40 chr2 187802605 187802778 -62885076 + (TA)n Simple_repeat Simple_repeat 1 177 0 302 104 0 42 chr2 187803336 187803384 -62884470 + THE1C LTR MaLR 1 46 -318 1541 233 99 11 chr2 187803388 187803852 -62884002 - LTR22 LTR ERVK -4 505 1 1609 167 52 0 chr2 187803857 187804163 -62883691 + THE1C LTR MaLR 54 375 0 25 51 0 0 chr2 187804907 187804946 -62882908 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr2 187806879 187806904 -62880950 + AT_rich Low_complexity Low_complexity 1 25 0 542 294 64 26 chr2 187808333 187808598 -62879256 + L1M4 LINE L1 2346 2620 -3526 433 130 29 0 chr2 187811736 187811805 -62876049 - MLT1A1 LTR MaLR 0 365 295 1479 16 0 38 chr2 187811810 187811995 -62875859 - L1PA2 LINE L1 -6 6149 5972 1488 203 46 10 chr2 187812019 187812324 -62875530 - MLT1A1 LTR MaLR -49 316 1 24 32 0 0 chr2 187812555 187812586 -62875268 + AT_rich Low_complexity Low_complexity 1 31 0 1856 148 15 12 chr2 187812822 187813152 -62874702 - L1MA2 LINE L1 -9 6295 5965 1307 285 67 34 chr2 187813705 187814241 -62873613 - MER68 LTR ERV1 -8 554 1 482 294 140 29 chr2 187814469 187814712 -62873142 - MER90 LTR ERV1 -47 528 313 1270 214 110 3 chr2 187814712 187815021 -62872833 - MER2 DNA MER2_type 0 344 3 482 294 140 29 chr2 187815021 187815192 -62872662 - MER90 LTR ERV1 -262 313 68 24 0 0 0 chr2 187815515 187815539 -62872315 + AT_rich Low_complexity Low_complexity 1 24 0 830 164 0 0 chr2 187817776 187817904 -62869950 - FLAM_A SINE Alu -9 133 6 231 304 88 48 chr2 187818060 187818091 -62869763 - L2 LINE L2 -940 2374 2346 2146 147 28 0 chr2 187818091 187818445 -62869409 + THE1B LTR MaLR 1 364 0 231 304 88 48 chr2 187818445 187818538 -62869316 - L2 LINE L2 -968 2346 2245 779 221 173 11 chr2 187818639 187818911 -62868943 + MER33 DNA MER1_type 8 323 -1 1733 264 79 84 chr2 187819226 187819992 -62867862 - L1MC5 LINE L1 -65 7896 7128 821 129 0 0 chr2 187819992 187820124 -62867730 - L1MA5A LINE L1 -1 6296 6165 1733 264 79 84 chr2 187820124 187821299 -62866555 - L1MC5 LINE L1 -833 7128 5871 2356 132 5 16 chr2 187821299 187821678 -62866176 + THE1C LTR MaLR 1 375 0 1733 264 79 84 chr2 187821678 187822126 -62865728 - L1MC5 LINE L1 -2090 5871 5422 2533 256 45 5 chr2 187822126 187822427 -62865427 - L1ME2 LINE L1 -7 6157 5857 682 303 94 18 chr2 187822427 187822915 -62864939 - L1MA4 LINE L1 -449 5851 5327 1353 147 5 5 chr2 187823075 187823286 -62864568 + AluSp SINE Alu 88 298 -15 3037 254 71 28 chr2 187823286 187824147 -62863707 - L1ME2 LINE L1 -1060 5086 4149 2726 76 3 3 chr2 187824147 187824502 -62863352 - THE1A LTR MaLR 0 355 1 3037 254 71 28 chr2 187824502 187824939 -62862915 - L1ME2 LINE L1 -1997 4149 3732 217 306 117 18 chr2 187825640 187825751 -62862103 - L2 LINE L2 -639 2675 2554 325 247 59 0 chr2 187826302 187826387 -62861467 + MIR SINE MIR 169 258 -4 302 330 84 54 chr2 187826382 187826788 -62861066 - L2 LINE L2 -1062 2252 1835 * 28 0 0 0 chr2 187827438 187827466 -62860388 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 187827617 187827640 -62860214 + AT_rich Low_complexity Low_complexity 1 23 0 1168 181 31 105 chr2 187827644 187827993 -62859861 - L1ME LINE L1 -556 5610 5316 1746 177 10 3 chr2 187827993 187828298 -62859556 + AluJo SINE Alu 1 307 -5 1168 181 31 105 chr2 187828298 187828509 -62859345 - L1ME LINE L1 -850 5316 5091 * 1816 234 53 34 chr2 187828506 187829071 -62858783 + L1ME1 LINE L1 5593 6325 -9 365 214 107 80 chr2 187830100 187830324 -62857530 - L1ME4a LINE L1 -1 6120 5891 33 0 0 0 chr2 187830606 187830639 -62857215 + AT_rich Low_complexity Low_complexity 1 33 0 226 294 33 11 chr2 187830757 187830849 -62857005 + MLT1J LTR MaLR 357 450 -61 229 174 0 58 chr2 187830878 187830947 -62856907 + L1ME4a LINE L1 6016 6080 -41 583 360 53 15 chr2 187832026 187832437 -62855417 + MLT1J LTR MaLR 55 481 -30 318 274 103 32 chr2 187833273 187833618 -62854236 + MLT1K LTR MaLR 192 586 -2 402 349 40 11 chr2 187834069 187834244 -62853610 + MLT1K LTR MaLR 132 311 -277 498 108 0 0 chr2 187834558 187834632 -62853222 + (TA)n Simple_repeat Simple_repeat 1 74 0 370 299 58 20 chr2 187835449 187835644 -62852210 + LTR41 LTR ERVL 1 214 -581 538 225 178 39 chr2 187835811 187835878 -62851976 + LTR50 LTR ERVL 533 589 -206 1914 260 54 24 chr2 187835878 187836452 -62851402 - MLT1E LTR MaLR -2 591 1 538 225 178 39 chr2 187836452 187836615 -62851239 + LTR50 LTR ERVL 589 795 0 234 0 0 0 chr2 187839402 187839428 -62848426 + (A)n Simple_repeat Simple_repeat 1 26 0 663 308 86 28 chr2 187839722 187840222 -62847632 + L1MC/D LINE L1 5290 5818 -1990 2048 95 10 23 chr2 187840230 187840534 -62847320 + AluSp SINE Alu 1 300 -13 412 238 73 18 chr2 187841497 187841637 -62846217 + MIR3 SINE MIR 29 177 -31 22 0 0 0 chr2 187842179 187842201 -62845653 + AT_rich Low_complexity Low_complexity 1 22 0 511 326 86 9 chr2 187842201 187842422 -62845432 + MIR SINE MIR 7 244 -18 465 332 54 10 chr2 187842485 187842690 -62845164 + L2 LINE L2 2272 2485 -829 2256 112 0 6 chr2 187842725 187843037 -62844817 - AluSx SINE Alu -2 310 1 185 321 25 25 chr2 187843328 187843409 -62844445 + L2 LINE L2 2969 3049 -223 252 86 0 0 chr2 187844528 187844563 -62843291 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 5328 32 3 11 chr2 187845759 187846406 -62841448 + L1PA4 LINE L1 5514 6155 0 38 22 0 0 chr2 187846536 187846581 -62841273 + AT_rich Low_complexity Low_complexity 1 45 0 2168 248 115 30 chr2 187847285 187848773 -62839081 - L1MCc LINE L1 -2058 4883 3048 1273 255 59 40 chr2 187848784 187849644 -62838210 - L1MCc LINE L1 -4891 1532 1117 380 277 92 92 chr2 187849849 187850242 -62837612 - L1MCc LINE L1 -6006 417 25 204 97 0 0 chr2 187850323 187850354 -62837500 + (TCCA)n Simple_repeat Simple_repeat 4 34 0 21 36 0 0 chr2 187852088 187852116 -62835738 + AT_rich Low_complexity Low_complexity 1 28 0 309 284 35 71 chr2 187852170 187852311 -62835543 + MER20B DNA MER1_type 56 191 -28 27 73 0 0 chr2 187853493 187853548 -62834306 + AT_rich Low_complexity Low_complexity 1 55 0 268 277 179 0 chr2 187853552 187853664 -62834190 - MIR SINE MIR -2 260 129 1494 316 56 11 chr2 187853763 187854393 -62833461 - MLT2F LTR ERVL -5 658 1 252 0 0 0 chr2 187855148 187855176 -62832678 + (CA)n Simple_repeat Simple_repeat 1 28 0 1834 91 0 0 chr2 187855254 187855484 -62832370 + AluSx SINE Alu 55 284 -28 343 286 225 0 chr2 187855503 187855730 -62832124 - L1ME4a LINE L1 -256 5865 5588 24 0 0 0 chr2 187856025 187856049 -62831805 + AT_rich Low_complexity Low_complexity 1 24 0 2275 211 36 4 chr2 187856342 187856862 -62830992 - L1MD3 LINE L1 -2 7993 7457 747 143 24 65 chr2 187856863 187857022 -62830832 + MLT1C LTR MaLR 2 153 -314 2240 108 147 21 chr2 187857022 187857373 -62830481 - MSTA LTR MaLR 0 428 24 2534 102 19 11 chr2 187857373 187857745 -62830109 - THE1C LTR MaLR 0 375 1 2240 108 147 21 chr2 187857745 187857773 -62830081 - MSTA LTR MaLR -404 24 1 1809 194 9 6 chr2 187857773 187858091 -62829763 + MLT1C LTR MaLR 148 466 -1 450 243 28 0 chr2 187858138 187858245 -62829609 - MLT1F1 LTR MaLR -457 110 1 2118 265 38 21 chr2 187858246 187858965 -62828889 - L1MD3 LINE L1 -680 7105 6540 281 330 59 8 chr2 187859360 187859478 -62828376 - MIR3 SINE MIR -1 207 84 29103 123 20 57 chr2 187860275 187866666 -62821188 + L1PA7 LINE L1 9 6147 -7 305 165 113 21 chr2 187868334 187868431 -62819423 - LTR67 LTR ERVL -20 537 432 242 200 29 14 chr2 187869105 187869175 -62818679 - MER63 DNA MER1_type -46 1014 944 523 274 40 11 chr2 187869178 187869353 -62818501 + MER63 DNA MER1_type 741 920 -142 5187 147 53 21 chr2 187869447 187870771 -62817083 + L1MA8 LINE L1 4930 6289 -2 230 373 18 18 chr2 187876067 187876177 -62811677 + MER5B DNA MER1_type 7 116 -62 183 320 24 56 chr2 187876082 187876207 -62811647 - MER5A DNA MER1_type -21 168 48 * 219 69 0 0 chr2 187876330 187876359 -62811495 + (A)n Simple_repeat Simple_repeat 1 29 0 326 259 12 0 chr2 187876858 187876943 -62810911 + MER103 DNA DNA 62 147 -19 3519 164 61 33 chr2 187877981 187878705 -62809149 + Tigger2 DNA MER2_type 1 744 -1974 1288 167 47 0 chr2 187878769 187879002 -62808852 + Tigger2 DNA MER2_type 2475 2718 0 343 308 19 9 chr2 187879095 187879202 -62808652 + MIR SINE MIR 68 175 -87 669 253 39 17 chr2 187879804 187879982 -62807872 - Ricksha DNA DNA -2341 905 724 1686 199 12 96 chr2 187879984 187880390 -62807464 - MLT2B2 LTR ERVL -134 381 10 22 0 0 0 chr2 187880544 187880566 -62807288 + AT_rich Low_complexity Low_complexity 1 22 0 1703 178 0 7 chr2 187881284 187881587 -62806267 + AluSx SINE Alu 4 304 -8 192 125 36 18 chr2 187881608 187881664 -62806190 + (TA)n Simple_repeat Simple_repeat 2 58 0 21 36 0 0 chr2 187882935 187882963 -62804891 + AT_rich Low_complexity Low_complexity 1 28 0 402 213 32 32 chr2 187883013 187883107 -62804747 + MER5A DNA MER1_type 13 106 -83 195 307 50 40 chr2 187883037 187883138 -62804716 - MER5A DNA MER1_type -25 164 63 * 23 0 0 0 chr2 187884165 187884188 -62803666 + AT_rich Low_complexity Low_complexity 1 23 0 286 315 83 54 chr2 187884589 187884830 -62803024 + MLT1J1 LTR MaLR 59 306 -140 283 253 58 0 chr2 187884987 187885074 -62802780 + MER94 DNA DNA 1 92 -42 251 348 76 0 chr2 187885457 187885575 -62802279 + MIR SINE MIR 101 227 -35 1061 196 152 85 chr2 187886905 187887339 -62800515 + MLT1C LTR MaLR 5 467 0 1489 202 6 32 chr2 187887392 187887704 -62800150 - AluJo SINE Alu -8 304 1 3268 254 77 24 chr2 187887781 187887829 -62800025 + L1ME1 LINE L1 36 80 -6316 2129 239 53 23 chr2 187887829 187888435 -62799419 - MLT1E3 LTR MaLR 0 624 1 3268 254 77 24 chr2 187888435 187889511 -62798343 + L1ME1 LINE L1 80 1220 -5176 243 0 0 0 chr2 187889516 187889543 -62798311 + (TA)n Simple_repeat Simple_repeat 1 27 0 1823 121 0 37 chr2 187889544 187889817 -62798037 - AluY SINE Alu -12 299 37 1875 144 55 55 chr2 187889853 187890236 -62797618 - MER61D LTR ERV1 -5 496 114 43768 39 4 2 chr2 187890343 187896478 -62791376 - L1PA3 LINE L1 0 6155 4 1833 268 58 9 chr2 187896517 187897207 -62790647 + L1ME1 LINE L1 4511 5234 -981 6580 84 20 7 chr2 187897210 187899673 -62788181 + L1PA8 LINE L1 3567 6169 -3 598 199 111 8 chr2 187899685 187899874 -62787980 + L1ME1 LINE L1 5227 5440 -808 983 222 39 101 chr2 187899874 187900066 -62787788 + MLT1D LTR MaLR 1 162 -343 2159 137 0 3 chr2 187900066 187900379 -62787475 - AluSx SINE Alu 0 312 1 983 222 39 101 chr2 187900379 187900542 -62787312 + MLT1D LTR MaLR 162 334 -171 1590 139 198 15 chr2 187900543 187900882 -62786972 + MSTA LTR MaLR 1 401 -27 1899 121 3 62 chr2 187900911 187901218 -62786636 - AluSq SINE Alu -24 289 1 351 87 0 0 chr2 187901218 187901264 -62786590 + MSTA LTR MaLR 383 428 0 312 196 0 2 chr2 187901394 187901461 -62786393 + MLT1D LTR MaLR 448 505 0 2218 253 38 32 chr2 187901461 187902199 -62785655 + L1ME1 LINE L1 5433 6174 -61 892 300 111 24 chr2 187903245 187903668 -62784186 + MLT1J LTR MaLR 1 460 -51 482 325 78 13 chr2 187904975 187905206 -62782648 - MIR SINE MIR -7 255 10 403 316 102 12 chr2 187905578 187905834 -62782020 - L2 LINE L2 -1506 1808 1530 4719 78 16 2 chr2 187907375 187908017 -62779837 - L1PA13 LINE L1 0 6163 5513 201 286 0 0 chr2 187908803 187908845 -62779009 - L2 LINE L2 -95 3177 3136 1051 160 0 0 chr2 187908876 187909063 -62778791 + L1MA3 LINE L1 6117 6303 -2 1158 90 6 2 chr2 187909217 187909399 -62778455 + L1P4 LINE L1 5603 5782 -386 509 96 0 72 chr2 187909400 187909483 -62778371 + AluSc SINE Alu 218 294 -15 2046 123 50 31 chr2 187909488 187909845 -62778009 - THE1B LTR MaLR 0 364 1 11228 102 19 1 chr2 187909845 187911396 -62776458 - THE1B-int LTR MaLR 0 1580 1 2178 115 50 31 chr2 187911396 187911753 -62776101 - THE1B LTR MaLR 0 364 1 329 348 22 15 chr2 187912459 187912594 -62775260 - MLT1K LTR MaLR -229 359 224 501 383 41 42 chr2 187915521 187916184 -62771670 + L2 LINE L2 2565 3232 -81 2236 36 0 0 chr2 187916276 187916529 -62771325 + AluY SINE Alu 1 253 -58 23 68 0 0 chr2 187917050 187917094 -62770760 + AT_rich Low_complexity Low_complexity 1 44 0 1981 195 122 26 chr2 187917148 187917754 -62770100 - Charlie1 DNA MER1_type 0 2761 2098 475 264 48 8 chr2 187917759 187917884 -62769970 - Charlie1 DNA MER1_type -2631 130 1 350 297 65 19 chr2 187918219 187918542 -62769312 - L1MEc LINE L1 -3372 2757 2420 318 341 19 24 chr2 187918557 187918762 -62769092 - L1MEc LINE L1 -3756 2373 2170 24 0 0 0 chr2 187918809 187918833 -62769021 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 187919102 187919124 -62768730 + AT_rich Low_complexity Low_complexity 1 22 0 296 303 149 54 chr2 187919140 187920633 -62767221 - L1MEc LINE L1 -4584 1726 11 21 36 0 0 chr2 187920899 187920927 -62766927 + AT_rich Low_complexity Low_complexity 1 28 0 1713 208 59 14 chr2 187920946 187921317 -62766537 + MSTD LTR MaLR 9 396 0 772 200 60 175 chr2 187921388 187921823 -62766031 + MLT2C1 LTR ERVL 13 397 0 2047 138 18 44 chr2 187921979 187922364 -62765490 + THE1C LTR MaLR 1 375 0 1859 290 56 27 chr2 187922517 187923227 -62764627 + L2 LINE L2 1990 2720 -594 698 172 78 0 chr2 187923227 187923355 -62764499 + FRAM SINE Alu 1 138 -38 534 178 85 16 chr2 187923377 187923506 -62764348 + L2 LINE L2 2709 2846 -468 327 351 45 47 chr2 187923821 187924180 -62763674 - L2 LINE L2 -1497 1817 1460 475 224 61 41 chr2 187924657 187924804 -62763050 + L1ME3A LINE L1 5985 6134 -36 184 356 41 0 chr2 187924941 187925014 -62762840 + L2 LINE L2 1864 1939 -1375 23 0 0 0 chr2 187929727 187929750 -62758104 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr2 187930187 187930210 -62757644 + (A)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr2 187930260 187930281 -62757573 + AT_rich Low_complexity Low_complexity 1 21 0 1170 124 18 32 chr2 187930893 187931111 -62756743 + LTR23 LTR ERV1 223 437 0 802 116 0 0 chr2 187931309 187931421 -62756433 - L1P LINE L1 -2415 3731 3620 352 75 65 21 chr2 187931427 187931520 -62756334 + (TA)n Simple_repeat Simple_repeat 1 97 0 20802 101 9 7 chr2 187931547 187935464 -62752390 - L1PA7 LINE L1 -15 6139 2215 3899 134 106 62 chr2 187935464 187936444 -62751410 + pTR5 LTR ERV1 743 2025 -413 342 243 28 0 chr2 187936444 187936551 -62751303 + LTR30 LTR ERV1 544 653 -69 2171 90 0 3 chr2 187936551 187936862 -62750992 + pTR5 LTR ERV1 75 384 -2054 11869 116 12 29 chr2 187936862 187939421 -62748433 - L1P3 LINE L1 -3918 2543 10 383 281 22 22 chr2 187939454 187939593 -62748261 + L1MC4a LINE L1 5777 5915 -1893 1464 202 180 31 chr2 187939942 187940393 -62747461 - MLT2B1 LTR ERVL 0 520 3 469 307 111 63 chr2 187940608 187941084 -62746770 + LTR67 LTR ERVL 59 557 0 190 273 333 0 chr2 187941357 187941489 -62746365 - MIR SINE MIR -48 214 39 686 157 41 0 chr2 187941679 187941800 -62746054 + FLAM_A SINE Alu 1 126 -7 210 171 0 0 chr2 187941831 187941866 -62745988 + A-rich Low_complexity Low_complexity 1 35 0 4540 210 84 46 chr2 187946389 187948791 -62739063 + L1ME1 LINE L1 3668 6157 -9 1231 191 246 14 chr2 187949229 187949575 -62738279 + MSTB LTR MaLR 1 426 0 239 274 89 70 chr2 187949788 187949945 -62737909 - MIR SINE MIR -102 160 1 25 0 0 0 chr2 187950322 187950347 -62737507 + AT_rich Low_complexity Low_complexity 1 25 0 3592 40 0 2 chr2 187952313 187952762 -62735092 - LTR7 LTR ERV1 -2 448 1 2259 160 49 2 chr2 187953359 187953766 -62734088 - MSTA LTR MaLR 0 428 3 2249 115 75 0 chr2 187953843 187954192 -62733662 - THE1C LTR MaLR 0 375 1 21 36 0 0 chr2 187954311 187954339 -62733515 + AT_rich Low_complexity Low_complexity 1 28 0 2462 133 67 44 chr2 187955829 187956304 -62731550 - L1PB3 LINE L1 0 6154 5669 1395 241 106 47 chr2 187957206 187957742 -62730112 - MLT1F1 LTR MaLR 0 567 1 952 317 85 13 chr2 187957762 187958772 -62729082 - L1MC4a LINE L1 -754 5392 4795 399 287 169 46 chr2 187958780 187959146 -62728708 - L1MC4a LINE L1 -1440 4706 4296 637 214 95 163 chr2 187961879 187962468 -62725386 - MLT1H LTR MaLR 0 549 1 225 65 0 0 chr2 187963322 187963353 -62724501 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2948 278 90 25 chr2 187963356 187964679 -62723175 - L2 LINE L2 -14 3299 1920 338 270 63 32 chr2 187966188 187966314 -62721540 + MIR SINE MIR 25 154 -108 488 312 84 19 chr2 187966348 187966563 -62721291 - MIR SINE MIR -20 242 14 223 326 7 85 chr2 187966613 187966754 -62721100 - MIR SINE MIR -65 197 68 201 333 14 14 chr2 187967043 187967115 -62720739 + L2 LINE L2 3242 3313 0 2554 137 31 2 chr2 187968055 187968478 -62719376 - Tigger2 DNA MER2_type 0 2718 2284 280 191 0 48 chr2 187968489 187968552 -62719302 + MER8 DNA MER2_type 180 239 0 36 23 0 0 chr2 187968882 187968925 -62718929 + AT_rich Low_complexity Low_complexity 1 43 0 4372 92 209 0 chr2 187969504 187970187 -62717667 + LTR12 LTR ERV1 1 826 0 19204 104 20 6 chr2 187970200 187973091 -62714763 + HERV9 LTR ERV1 40 2972 -5427 1219 102 5 0 chr2 187973090 187973276 -62714578 + HERV9 LTR ERV1 4756 4942 -3457 * 2114 189 106 54 chr2 187973278 187974115 -62713739 + Harlequin LTR ERV1 840 1720 -5176 * 4428 86 3 14 chr2 187974109 187974760 -62713094 + Harlequin LTR ERV1 7756 8399 0 1731 80 287 203 chr2 187974760 187975297 -62712557 + LTR12 LTR ERV1 1 714 0 279 314 24 32 chr2 187975852 187976100 -62711754 + L1MEd LINE L1 988 1233 -4886 191 293 81 50 chr2 187976362 187976461 -62711393 + L2 LINE L2 3187 3288 -25 195 306 118 0 chr2 187976489 187976574 -62711280 - MIR SINE MIR -77 131 37 * 265 292 164 32 chr2 187976564 187976814 -62711040 - L3 LINE CR1 -627 950 668 6201 189 70 14 chr2 187976982 187977765 -62710089 + L1MA4 LINE L1 4 742 -5586 2276 123 0 0 chr2 187977765 187978074 -62709780 + AluSx SINE Alu 2 310 -2 6201 189 70 14 chr2 187978074 187979668 -62708186 + L1MA4 LINE L1 742 2522 -3806 11740 182 32 11 chr2 187979700 187982365 -62705489 + L1MA4 LINE L1 2631 5350 -978 717 132 0 0 chr2 187982371 187982477 -62705377 + AluSg/x SINE Alu 192 297 -15 2635 185 53 20 chr2 187982478 187983395 -62704459 + L1ME3A LINE L1 5342 6318 -34 2693 170 22 6 chr2 187983410 187983952 -62703902 + L1MA4 LINE L1 5931 6481 -1 1946 178 3 3 chr2 187984812 187985166 -62702688 - MLT1A1 LTR MaLR -2 363 10 417 300 54 15 chr2 187985373 187985503 -62702351 + L2 LINE L2 3123 3257 -15 24 32 0 0 chr2 187985845 187985876 -62701978 + AT_rich Low_complexity Low_complexity 1 31 0 245 295 213 66 chr2 187987388 187987571 -62700283 - L3b LINE CR1 -34 1549 1340 2285 96 0 0 chr2 187987801 187988092 -62699762 - AluSg SINE Alu -19 291 1 1214 224 84 15 chr2 187988722 187989114 -62698740 + Charlie4a DNA MER1_type 25 443 -65 1818 265 96 48 chr2 187989118 187989889 -62697965 + L1M4b LINE L1 11 818 -6041 686 237 41 57 chr2 187989906 187990222 -62697632 + L1M4b LINE L1 1753 2063 -4896 2907 88 17 14 chr2 187990402 187990824 -62697030 + L1PA7 LINE L1 5731 6153 -1 380 211 86 23 chr2 187990856 187990984 -62696870 + MER103 DNA DNA 29 164 -2 298 212 0 61 chr2 187991990 187992089 -62695765 + LTR33A LTR ERVL 412 504 -19 372 264 77 39 chr2 187992575 187992757 -62695097 + L1ME LINE L1 5452 5640 -481 189 306 182 33 chr2 187993471 187993592 -62694262 + L2 LINE L2 3134 3272 0 22 70 0 0 chr2 187993687 187993730 -62694124 + AT_rich Low_complexity Low_complexity 1 43 0 24 53 0 0 chr2 187994288 187994326 -62693528 + AT_rich Low_complexity Low_complexity 1 38 0 309 322 99 0 chr2 187994652 187994803 -62693051 - MIR SINE MIR -3 259 94 379 282 42 17 chr2 187994803 187994954 -62692900 + MIR3 SINE MIR 1 159 -63 2264 150 68 5 chr2 187995206 187995606 -62692248 + MSTC LTR MaLR 1 425 -3 499 274 78 22 chr2 187997038 187997217 -62690637 + MIR SINE MIR 55 243 -19 1911 169 45 30 chr2 187997280 187997821 -62690033 - MLT2A2 LTR ERVL 0 554 1 5217 123 18 11 chr2 187997908 187998821 -62689033 + L1PB2 LINE L1 5223 6142 -9 5689 139 41 22 chr2 187998851 188000281 -62687573 + L1M1 LINE L1 2636 4108 -3457 317 138 92 0 chr2 188000314 188000379 -62687475 - MER46B DNA MER2_type -74 162 92 6163 93 43 59 chr2 188000417 188001981 -62685873 - L1PA10 LINE L1 -3 6165 4623 1524 172 41 31 chr2 188002222 188002513 -62685341 + AluJo SINE Alu 3 296 -16 289 93 37 0 chr2 188002609 188002663 -62685191 + (TTTA)n Simple_repeat Simple_repeat 1 56 0 9217 73 11 83 chr2 188002666 188004140 -62683714 - SVA Other Other -17 1369 2 231 114 0 0 chr2 188004144 188004179 -62683675 + (AGGGGG)n Simple_repeat Simple_repeat 5 39 0 642 171 8 0 chr2 188004179 188004296 -62683558 - L1PA10 LINE L1 -1508 4638 4521 1060 170 71 0 chr2 188004296 188004508 -62683346 - MER46B DNA MER2_type -134 102 1 346 153 0 14 chr2 188004508 188004580 -62683274 - MER53 DNA DNA -118 71 1 342 191 150 67 chr2 188005097 188005362 -62682492 - Charlie8 DNA MER1_type -992 1425 36 21 36 0 0 chr2 188005725 188005753 -62682101 + AT_rich Low_complexity Low_complexity 1 28 0 307 284 136 32 chr2 188006380 188006535 -62681319 + MIR SINE MIR 26 196 -66 730 160 171 11 chr2 188006711 188006892 -62680962 + MER2 DNA MER2_type 2 211 -134 238 241 121 0 chr2 188006919 188006977 -62680877 + MER2 DNA MER2_type 280 344 -1 308 88 18 0 chr2 188009609 188009666 -62678188 + (TA)n Simple_repeat Simple_repeat 2 59 0 10571 166 28 13 chr2 188010129 188012038 -62675816 + L1M1 LINE L1 8 1945 -5620 2332 110 16 14 chr2 188012041 188012510 -62675344 + L1M1 LINE L1 3284 3753 -3812 917 187 5 10 chr2 188012508 188012706 -62675148 - L1 LINE L1 -2167 3979 3783 * 5321 91 33 45 chr2 188012702 188013648 -62674206 + L1MA3 LINE L1 5367 6300 -5 818 246 34 0 chr2 188013873 188014080 -62673774 - MER58C DNA MER1_type -1 214 1 1321 211 181 2 chr2 188014744 188015165 -62672689 - LTR54B LTR ERV1 -2 496 1 33 25 0 0 chr2 188017299 188017339 -62670515 + AT_rich Low_complexity Low_complexity 1 40 0 253 255 10 78 chr2 188019834 188019936 -62667918 - MIR SINE MIR -12 250 156 315 0 0 0 chr2 188019953 188019988 -62667866 + (AGATG)n Simple_repeat Simple_repeat 5 39 0 5743 71 27 4 chr2 188020524 188021303 -62666551 + L1PA7 LINE L1 5358 6154 0 1283 155 53 90 chr2 188021421 188021744 -62666110 + L1MA10 LINE L1 6024 6334 0 342 370 84 30 chr2 188024052 188024261 -62663593 + L2 LINE L2 2487 2683 -631 1452 201 24 17 chr2 188024261 188024550 -62663304 + AluJo SINE Alu 1 291 -21 342 370 84 30 chr2 188024550 188024745 -62663109 + L2 LINE L2 2683 2913 -401 22 0 0 0 chr2 188024851 188024873 -62662981 + AT_rich Low_complexity Low_complexity 1 22 0 578 263 95 49 chr2 188024875 188025179 -62662675 - L2 LINE L2 -1 3312 2995 331 293 38 0 chr2 188025780 188025886 -62661968 - MER117 DNA MER1_type -48 149 40 446 308 122 33 chr2 188026610 188027197 -62660657 + L2 LINE L2 2636 3277 -36 1724 268 75 36 chr2 188027503 188028112 -62659742 - MLT1E1 LTR MaLR -21 633 1 44287 38 1 3 chr2 188028188 188034350 -62653504 + L1PA4 LINE L1 1 6147 -8 185 250 45 0 chr2 188035068 188035112 -62652742 + MER5B DNA MER1_type 3 48 -130 233 329 98 0 chr2 188035144 188035226 -62652628 + MER5B DNA MER1_type 44 133 -45 949 229 83 20 chr2 188035401 188035654 -62652200 + L1ME1 LINE L1 39 307 -6089 2888 240 62 23 chr2 188035657 188036427 -62651427 + L1ME1 LINE L1 4317 5055 -1180 1961 114 4 4 chr2 188036427 188036699 -62651155 - AluSc SINE Alu 0 309 38 2888 240 62 23 chr2 188036699 188037668 -62650186 + L1ME1 LINE L1 5055 6134 -101 234 276 236 0 chr2 188037619 188037742 -62650112 + L1MA10 LINE L1 6245 6396 -7 * 283 275 141 0 chr2 188038221 188038342 -62649512 + L1ME3 LINE L1 5972 6107 -57 25 51 0 0 chr2 188038405 188038444 -62649410 + AT_rich Low_complexity Low_complexity 1 39 0 614 227 103 44 chr2 188038589 188038792 -62649062 - MER58C DNA MER1_type 0 215 1 1451 184 88 69 chr2 188038893 188039269 -62648585 + MSTD LTR MaLR 1 383 -13 21 114 0 0 chr2 188039973 188040078 -62647776 + AT_rich Low_complexity Low_complexity 1 105 0 1189 292 84 3 chr2 188040145 188040536 -62647318 + L3 LINE CR1 890 1312 -265 850 248 158 13 chr2 188040537 188040835 -62647019 - MER58B DNA MER1_type 0 341 1 24 53 0 0 chr2 188040890 188040928 -62646926 + AT_rich Low_complexity Low_complexity 1 38 0 745 337 78 16 chr2 188041050 188041421 -62646433 + LTR16C LTR ERVL 98 491 0 228 328 0 98 chr2 188041456 188041508 -62646346 + L3 LINE CR1 1465 1500 -77 597 193 110 110 chr2 188041508 188041726 -62646128 + MER20 DNA MER1_type 1 218 -1 228 328 0 98 chr2 188041726 188041795 -62646059 + L3 LINE CR1 1500 1574 -3 681 292 139 51 chr2 188043581 188044070 -62643784 - MLT1K LTR MaLR 0 588 57 2013 231 43 8 chr2 188044237 188044747 -62643107 + HsTC2 DNA Tc2 1 528 -1370 33 56 0 0 chr2 188044831 188044885 -62642969 + AT_rich Low_complexity Low_complexity 1 54 0 226 195 182 0 chr2 188044888 188044965 -62642889 + HsTC2 DNA Tc2 1803 1893 -5 185 398 45 0 chr2 188044970 188045058 -62642796 - L2 LINE L2 -36 3236 3145 23 33 0 0 chr2 188045196 188045226 -62642628 + AT_rich Low_complexity Low_complexity 1 30 0 678 244 116 62 chr2 188045240 188045515 -62642339 + L2 LINE L2 2414 2703 -611 1334 115 16 0 chr2 188045517 188045709 -62642145 + MER30 DNA MER1_type 1 195 -35 500 314 212 9 chr2 188045719 188046217 -62641637 + L2 LINE L2 2699 3313 0 2464 76 0 10 chr2 188046862 188047176 -62640678 - AluY SINE Alu 0 311 1 480 184 7 135 chr2 188048086 188048227 -62639627 + MER94 DNA DNA 4 126 -8 204 237 0 0 chr2 188048550 188048588 -62639266 - MIR3 SINE MIR -26 182 145 337 318 65 9 chr2 188048674 188048781 -62639073 - L2 LINE L2 0 3272 3160 2037 103 57 13 chr2 188048981 188049281 -62638573 + AluSp SINE Alu 1 313 0 3755 45 7 2 chr2 188050519 188050983 -62636871 - L1PA7 LINE L1 -6 6148 5683 185 327 0 0 chr2 188051207 188051259 -62636595 + MIR SINE MIR 78 129 -79 1739 193 64 40 chr2 188051350 188051801 -62636053 + MLT1D LTR MaLR 1 462 -43 2198 117 7 0 chr2 188051988 188052288 -62635566 + AluSq SINE Alu 1 302 -11 258 286 107 36 chr2 188052732 188052872 -62634982 + MLT1J LTR MaLR 308 457 -54 5917 168 24 29 chr2 188052975 188054138 -62633716 + L1MC1 LINE L1 4909 6058 -275 4357 195 4 13 chr2 188054138 188054934 -62632920 + MER54B LTR ERVL 1 789 -4 5917 168 24 29 chr2 188054934 188055203 -62632651 + L1MC1 LINE L1 6058 6327 -6 301 264 61 78 chr2 188055806 188056037 -62631817 - HAL1 LINE L1 -56 2451 2225 3610 52 0 0 chr2 188056549 188056993 -62630861 + L1PA5 LINE L1 5698 6141 -13 261 326 41 20 chr2 188057032 188057130 -62630724 - L2 LINE L2 0 3272 3173 213 273 34 0 chr2 188057416 188057504 -62630350 + (TA)n Simple_repeat Simple_repeat 2 92 0 397 146 204 0 chr2 188057925 188058028 -62629826 - MER112 DNA MER1_type -50 210 87 282 29 0 0 chr2 188058030 188058065 -62629789 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 35 0 0 chr2 188059852 188059881 -62627973 + AT_rich Low_complexity Low_complexity 1 29 0 219 36 0 0 chr2 188060010 188060038 -62627816 + (TG)n Simple_repeat Simple_repeat 2 29 0 20070 121 13 60 chr2 188060071 188066291 -62621563 - L1PA8 LINE L1 -5 6167 59 22 35 0 0 chr2 188067849 188067878 -62619976 + AT_rich Low_complexity Low_complexity 1 29 0 268 239 0 0 chr2 188068242 188068313 -62619541 + (TA)n Simple_repeat Simple_repeat 1 71 0 381 322 135 10 chr2 188070275 188070483 -62617371 + MIR SINE MIR 23 256 -6 1048 293 90 19 chr2 188071289 188072011 -62615843 - L2 LINE L2 0 3313 2544 2386 179 55 26 chr2 188072489 188072982 -62614872 - MER67D LTR ERV1 -4 510 4 646 208 83 0 chr2 188073598 188073766 -62614088 + L1MD2 LINE L1 5918 6099 -260 1111 160 10 32 chr2 188073839 188074071 -62613783 + MER67D LTR ERV1 71 298 -236 618 268 30 5 chr2 188074071 188074269 -62613585 + L1MD2 LINE L1 6144 6346 -13 656 317 143 12 chr2 188074314 188074642 -62613212 + L3 LINE CR1 1183 1553 -24 236 353 121 0 chr2 188075918 188076034 -62611820 - L2 LINE L2 0 3272 3143 * 525 232 63 14 chr2 188076012 188076154 -62611700 - L3 LINE CR1 -53 1524 1376 231 152 0 0 chr2 188076344 188076390 -62611464 + (CA)n Simple_repeat Simple_repeat 1 46 0 4113 183 6 68 chr2 188077053 188077945 -62609909 + L1PA13 LINE L1 2 837 -5950 463 242 273 5 chr2 188077942 188078111 -62609743 + L1PA13 LINE L1 1079 1201 -5586 * 591 85 0 0 chr2 188078111 188078193 -62609661 + (CTG)n Simple_repeat Simple_repeat 1 82 0 463 242 273 5 chr2 188078193 188078217 -62609637 + L1PA13 LINE L1 1201 1324 -5463 * 2984 223 12 6 chr2 188078215 188079022 -62608832 + L1PA13 LINE L1 3153 3964 -2833 7651 27 0 1 chr2 188079022 188080350 -62607504 + L1PA4 LINE L1 4826 6152 -3 9773 172 12 18 chr2 188080360 188082461 -62605393 + L1PA13 LINE L1 3975 6046 -768 2250 90 3 0 chr2 188082461 188082762 -62605092 + AluY SINE Alu 1 302 -9 9773 172 12 18 chr2 188082762 188083526 -62604328 + L1PA13 LINE L1 6046 6813 -1 23 33 0 0 chr2 188085185 188085215 -62602639 + AT_rich Low_complexity Low_complexity 1 30 0 1863 127 94 24 chr2 188085844 188086184 -62601670 - THE1B LTR MaLR 0 364 1 11671 99 1 8 chr2 188086184 188087774 -62600080 - THE1B-int LTR MaLR 0 1580 1 481 130 13 0 chr2 188087774 188087851 -62600003 - THE1B LTR MaLR 0 375 298 261 193 35 0 chr2 188087879 188087936 -62599918 + THE1B LTR MaLR 278 336 -28 1542 134 93 19 chr2 188088001 188088270 -62599584 - THE1B LTR MaLR -75 289 1 313 324 55 28 chr2 188088385 188088567 -62599287 + L1M4b LINE L1 1360 1546 -5313 1659 154 87 0 chr2 188088648 188088914 -62598940 + AluSx SINE Alu 1 289 -23 342 256 89 50 chr2 188088939 188089299 -62598555 + L1M4b LINE L1 1807 2180 -4958 1043 236 27 8 chr2 188089458 188089716 -62598138 - MLT1C LTR MaLR -1 466 204 380 186 35 0 chr2 188089731 188089844 -62598010 + CT-rich Low_complexity Low_complexity 3 119 0 760 172 46 33 chr2 188089850 188090051 -62597803 - MLT1C LTR MaLR -287 180 3 2063 74 0 11 chr2 188090230 188090499 -62597355 - AluY SINE Alu 0 311 46 712 177 7 20 chr2 188090519 188090666 -62597188 - L1PA15 LINE L1 0 6165 6021 323 256 61 28 chr2 188091242 188091422 -62596432 + L1M4b LINE L1 2307 2492 -4646 389 306 32 51 chr2 188091497 188091713 -62596141 + L1M4b LINE L1 2620 2831 -4307 11583 192 35 17 chr2 188091724 188094783 -62593071 + L1PA13 LINE L1 1 3121 -3676 5577 117 30 8 chr2 188094784 188094824 -62593030 + L1PA13 LINE L1 5395 5433 -1381 207 69 0 0 chr2 188094824 188094853 -62593001 + (CAAT)n Simple_repeat Simple_repeat 2 30 0 5577 117 30 8 chr2 188094853 188096203 -62591651 + L1PA13 LINE L1 5433 6810 -4 227 280 0 32 chr2 188096266 188096359 -62591495 + L1MC4 LINE L1 6614 6703 -1339 235 238 0 0 chr2 188096408 188096450 -62591404 - Alu SINE Alu -46 255 214 1685 135 8 0 chr2 188096477 188096721 -62591133 - AluSg/x SINE Alu -2 310 65 21 104 0 0 chr2 188097842 188097919 -62589935 + AT_rich Low_complexity Low_complexity 1 77 0 1065 247 108 14 chr2 188098078 188098438 -62589416 - MLT1K LTR MaLR -3 585 192 267 222 253 0 chr2 188099321 188099420 -62588434 - MER117 DNA MER1_type -28 169 46 1364 174 138 12 chr2 188101143 188101396 -62586458 + AluJo SINE Alu 1 285 -17 24 32 0 0 chr2 188101408 188101439 -62586415 + AT_rich Low_complexity Low_complexity 1 31 0 189 341 116 40 chr2 188101769 188101942 -62585912 - L2 LINE L2 -237 3035 2850 285 89 22 0 chr2 188102449 188102494 -62585360 - L2 LINE L2 0 3313 3268 294 50 0 0 chr2 188103389 188103429 -62584425 + (TG)n Simple_repeat Simple_repeat 2 41 0 699 253 41 20 chr2 188104800 188105045 -62582809 - L2 LINE L2 -2 3311 3062 606 295 60 101 chr2 188105035 188105114 -62582740 - L2 LINE L2 -531 2783 2702 * 2379 107 0 0 chr2 188105114 188105424 -62582430 + AluSx SINE Alu 1 310 -2 606 295 60 101 chr2 188105424 188105781 -62582073 - L2 LINE L2 -612 2702 2365 371 317 66 6 chr2 188105803 188105970 -62581884 - MLT1I LTR MaLR 0 409 233 338 222 25 0 chr2 188106107 188106188 -62581666 - MLT1J LTR MaLR -324 187 105 2071 78 45 0 chr2 188106558 188106827 -62581027 - AluSq SINE Alu -32 281 1 300 297 97 18 chr2 188107055 188107220 -62580634 - LTR33 LTR ERVL -311 210 33 5782 100 23 15 chr2 188107508 188108425 -62579429 - L1MA2 LINE L1 -1 6303 5380 250 303 40 0 chr2 188108838 188108914 -62578940 - L2 LINE L2 -948 2366 2288 207 319 147 17 chr2 188109702 188109818 -62578036 - L2 LINE L2 -1020 2294 2164 1281 213 28 90 chr2 188111479 188111878 -62575976 + MLT1A2 LTR MaLR 1 374 0 946 314 138 20 chr2 188112011 188112773 -62575081 + L2 LINE L2 2472 3313 0 1607 208 23 75 chr2 188112828 188113387 -62574467 + L1MA4A LINE L1 2564 3093 -3053 10334 86 9 10 chr2 188113387 188115657 -62572197 + L1PA7 LINE L1 3854 6153 -1 5680 159 27 13 chr2 188115655 188117440 -62570414 + L1MA4A LINE L1 4151 5952 -351 2504 59 0 13 chr2 188117441 188117746 -62570108 + AluY SINE Alu 2 302 -9 1355 81 0 0 chr2 188117746 188117918 -62569936 + AluY SINE Alu 133 304 -7 1750 133 21 18 chr2 188117930 188118261 -62569593 + L1MA4A LINE L1 5968 6299 -4 1989 120 10 24 chr2 188118459 188118751 -62569103 + AluSx SINE Alu 1 288 -24 272 326 0 33 chr2 188119414 188119506 -62568348 - L2 LINE L2 0 3272 3184 225 108 0 0 chr2 188119658 188119695 -62568159 + (GAATG)n Simple_repeat Simple_repeat 3 39 0 408 267 193 19 chr2 188119813 188119974 -62567880 + MER5A DNA MER1_type 1 189 0 620 208 28 28 chr2 188121726 188121904 -62565950 + MER53 DNA DNA 4 181 -8 313 219 14 14 chr2 188123399 188123472 -62564382 - MIR3 SINE MIR -1 207 135 2477 77 0 3 chr2 188124894 188125206 -62562648 - AluY SINE Alu 0 311 1 204 40 0 0 chr2 188125296 188125321 -62562533 + (CA)n Simple_repeat Simple_repeat 2 26 0 312 301 60 0 chr2 188125390 188125473 -62562381 - MIR SINE MIR -58 150 63 288 385 86 28 chr2 188125911 188126236 -62561618 - L2 LINE L2 -12 3260 2917 270 276 143 0 chr2 188126265 188126363 -62561491 - MIR SINE MIR -32 230 119 * 721 299 40 12 chr2 188126357 188126608 -62561246 - MIR SINE MIR 0 262 5 332 273 98 38 chr2 188126740 188126872 -62560982 + Charlie8 DNA MER1_type 92 231 -2186 2773 77 27 25 chr2 188127136 188127507 -62560347 + MLT2A1 LTR ERVL 1 375 -69 2268 63 0 18 chr2 188127507 188127793 -62560061 + AluY SINE Alu 21 301 -10 2773 77 27 25 chr2 188127793 188127825 -62560029 + MLT2A1 LTR ERVL 375 405 -39 25 31 0 0 chr2 188127825 188127857 -62559997 + AT_rich Low_complexity Low_complexity 1 32 0 240 111 0 0 chr2 188127872 188127908 -62559946 + (TA)n Simple_repeat Simple_repeat 2 37 0 357 289 0 0 chr2 188127912 188128002 -62559852 + L1MC4 LINE L1 6614 6703 -1339 236 153 34 34 chr2 188128002 188128061 -62559793 + LTR66 LTR ERVL 398 456 -154 * 255 42 146 0 chr2 188128031 188128079 -62559775 + MLT2A2 LTR ERVL 399 453 0 254 178 44 0 chr2 188128180 188128225 -62559629 + Charlie8 DNA MER1_type 1367 1413 -1004 1319 237 48 22 chr2 188128757 188129073 -62558781 - MLT1E2 LTR MaLR -2 624 301 1245 229 57 57 chr2 188129077 188129444 -62558410 - MLT1B LTR MaLR -23 367 1 283 234 91 0 chr2 188129444 188129521 -62558333 - MLT1E2 LTR MaLR -322 304 221 1646 123 32 0 chr2 188129581 188129833 -62558021 - L1MC1 LINE L1 -17 6316 6057 2251 93 30 3 chr2 188130242 188130544 -62557310 - AluSx SINE Alu -2 310 1 439 200 0 0 chr2 188130575 188130650 -62557204 + MER5A DNA MER1_type 15 89 -100 994 187 0 0 chr2 188130872 188131038 -62556816 - FRAM SINE Alu 0 166 1 222 222 22 0 chr2 188132046 188132091 -62555763 - L2 LINE L2 0 3272 3227 212 200 83 17 chr2 188133461 188133521 -62554333 - MIR SINE MIR -96 112 49 297 0 0 0 chr2 188134133 188134166 -62553688 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 293 193 57 57 chr2 188135019 188135107 -62552747 + MLT1L LTR MaLR 179 266 -349 276 216 40 27 chr2 188135148 188135222 -62552632 + MLT1I LTR MaLR 68 142 -267 249 178 54 124 chr2 188135353 188135482 -62552372 + MLT1L LTR MaLR 420 539 -16 684 341 53 26 chr2 188135521 188135999 -62551855 - L2 LINE L2 -236 3077 2586 367 319 30 60 chr2 188136047 188136218 -62551636 - L2 LINE L2 -866 2448 2284 310 57 38 0 chr2 188136218 188136271 -62551583 + (TA)n Simple_repeat Simple_repeat 2 56 0 367 319 30 60 chr2 188136271 188136331 -62551523 - L2 LINE L2 -1030 2284 2224 324 94 0 0 chr2 188137143 188137196 -62550658 + (CA)n Simple_repeat Simple_repeat 1 53 0 1742 221 51 22 chr2 188139217 188139666 -62548188 + MLT1C LTR MaLR 6 467 0 385 327 45 13 chr2 188140283 188140439 -62547415 - MIR SINE MIR -41 221 61 214 298 70 35 chr2 188140993 188141107 -62546747 - MIR SINE MIR -57 205 88 22 0 0 0 chr2 188142128 188142150 -62545704 + AT_rich Low_complexity Low_complexity 1 22 0 1454 245 55 25 chr2 188143869 188144269 -62543585 - MER97c DNA MER1_type? -666 424 13 522 261 22 0 chr2 188144311 188144449 -62543405 + Zaphod DNA AcHobo 2348 2488 -1543 13086 207 49 14 chr2 188144450 188147489 -62540365 + L1MA7 LINE L1 2795 6021 -1683 2447 67 0 0 chr2 188147489 188147787 -62540067 + AluY SINE Alu 1 298 -13 13086 207 49 14 chr2 188147787 188148749 -62539105 + L1MA7 LINE L1 6021 6948 -756 13977 157 16 10 chr2 188148752 188148951 -62538903 - Tigger1 DNA MER2_type 0 2418 2222 2276 116 0 0 chr2 188148951 188149245 -62538609 + AluSg SINE Alu 1 294 -16 13977 157 16 10 chr2 188149245 188149451 -62538403 - Tigger1 DNA MER2_type -196 2222 2019 8329 95 7 2 chr2 188149451 188151417 -62536437 - L1PA7 LINE L1 -3 6151 4178 13977 157 16 10 chr2 188151417 188153188 -62534666 - Tigger1 DNA MER2_type -399 2019 222 2219 104 7 0 chr2 188153188 188153487 -62534367 + AluSg SINE Alu 1 301 -9 13977 157 16 10 chr2 188153487 188153698 -62534156 - Tigger1 DNA MER2_type -2196 222 14 4309 138 16 19 chr2 188153712 188154459 -62533395 + L1MA7 LINE L1 6946 7690 -20 2156 209 144 41 chr2 188154481 188155327 -62532527 + Zaphod DNA AcHobo 2584 3516 -515 240 35 0 0 chr2 188155854 188155883 -62531971 + (A)n Simple_repeat Simple_repeat 1 29 0 4960 91 7 11 chr2 188155947 188156659 -62531195 - L1P LINE L1 -1724 4422 3714 * 9252 98 9 2 chr2 188156646 188157976 -62529878 - L1P LINE L1 -3138 3008 1670 8558 104 2 2 chr2 188157976 188160040 -62527814 + L1PA7 LINE L1 4086 6154 0 2893 68 11 0 chr2 188160040 188160416 -62527438 + L1PA7 LINE L1 5769 6153 -1 231 278 113 8 chr2 188161779 188161912 -62525942 + L1ME3A LINE L1 6009 6155 -15 180 0 0 0 chr2 188162765 188162785 -62525069 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 201 284 216 0 chr2 188163374 188163462 -62524392 - L3 LINE CR1 -9 1568 1462 225 128 0 0 chr2 188163504 188163543 -62524311 + L1ME LINE L1 5901 5939 -231 1952 140 25 13 chr2 188163658 188163972 -62523882 - MER1B DNA MER1_type -21 318 1 278 299 78 26 chr2 188164421 188164575 -62523279 - L2 LINE L2 -197 3075 2914 244 266 141 5 chr2 188164628 188164812 -62523042 + HAL1b LINE L1 689 897 -451 392 338 77 53 chr2 188164861 188165201 -62522653 + L2 LINE L2 2921 3268 -4 633 49 0 0 chr2 188165894 188165975 -62521879 + (TG)n Simple_repeat Simple_repeat 2 82 0 467 284 92 46 chr2 188166548 188166822 -62521032 + MLT1K LTR MaLR 69 419 -169 2173 102 0 3 chr2 188166891 188167174 -62520680 - AluSx SINE Alu -30 282 1 666 125 9 0 chr2 188168164 188168276 -62519578 + L1MA2 LINE L1 6192 6304 0 1759 179 85 107 chr2 188168436 188168968 -62518886 + MLT2B1 LTR ERVL 1 520 0 21 0 0 0 chr2 188169688 188169709 -62518145 + AT_rich Low_complexity Low_complexity 1 21 0 238 253 181 12 chr2 188170111 188170194 -62517660 + L2 LINE L2 3214 3310 -3 313 311 80 26 chr2 188170285 188170436 -62517418 - L2 LINE L2 -16 3297 3139 6193 84 14 0 chr2 188172764 188173612 -62514242 + L1PA10 LINE L1 5309 6168 0 227 305 67 48 chr2 188175289 188175394 -62512460 + L2 LINE L2 2945 3051 -221 189 307 31 63 chr2 188175513 188175640 -62512214 + MIR3 SINE MIR 48 170 -38 212 369 67 40 chr2 188175977 188176202 -62511652 - L2 LINE L2 -840 2474 2244 1051 238 79 3 chr2 188178053 188178436 -62509418 - L1ME LINE L1 -557 5607 5199 1258 216 39 59 chr2 188178437 188178832 -62509022 - MER39 LTR ERV1 -7 780 311 258 180 20 0 chr2 188178912 188178962 -62508892 - MER34 LTR ERV1 -491 51 1 739 249 105 28 chr2 188178992 188179317 -62508537 - L1ME LINE L1 -998 5148 4799 699 205 58 32 chr2 188179381 188179571 -62508283 + L1ME3 LINE L1 5605 5799 -363 233 143 0 20 chr2 188179637 188179686 -62508168 + L1MA3 LINE L1 5285 5332 -973 1980 74 0 19 chr2 188179687 188179956 -62507898 + L1PA8 LINE L1 5907 6170 -2 6468 112 8 12 chr2 188180030 188181024 -62506830 + L1MA3 LINE L1 5316 6305 0 13695 139 18 117 chr2 188181050 188184250 -62503604 + L1PA7 LINE L1 12 2891 -3255 13671 87 8 12 chr2 188184250 188186435 -62501419 + L1PA7 LINE L1 3447 5643 -511 6768 88 47 6 chr2 188186435 188187403 -62500451 - LTR13 LTR ERVK 0 1007 1 13671 87 8 12 chr2 188187403 188187902 -62499952 + L1PA7 LINE L1 5643 6143 -11 13695 139 18 117 chr2 188187902 188187929 -62499925 + L1PA7 LINE L1 2891 2919 -3227 1250 191 28 35 chr2 188187945 188188233 -62499621 + L1ME3 LINE L1 5852 6137 -25 2299 208 34 60 chr2 188188249 188188868 -62498986 - MLT1E2 LTR MaLR -11 615 13 21 36 0 0 chr2 188189694 188189722 -62498132 + AT_rich Low_complexity Low_complexity 1 28 0 5600 134 42 38 chr2 188190650 188191669 -62496185 - Tigger1 DNA MER2_type 0 2418 1396 1830 160 56 17 chr2 188191675 188192031 -62495823 + THE1C LTR MaLR 6 375 0 * 8201 138 30 18 chr2 188192031 188193387 -62494467 - Tigger1 DNA MER2_type -1020 1398 26 1639 205 239 36 chr2 188193477 188194058 -62493796 - MER39 LTR ERV1 -4 703 5 2416 75 0 10 chr2 188194345 188194653 -62493201 + AluY SINE Alu 7 311 0 189 0 0 0 chr2 188195186 188195207 -62492647 + (A)n Simple_repeat Simple_repeat 1 21 0 270 0 0 0 chr2 188195407 188195437 -62492417 + (A)n Simple_repeat Simple_repeat 1 30 0 677 56 48 39 chr2 188195949 188196201 -62491653 + (TA)n Simple_repeat Simple_repeat 1 254 0 214 294 15 15 chr2 188197330 188197398 -62490456 + L2 LINE L2 3242 3309 -4 1615 164 69 5 chr2 188197592 188197913 -62489941 - MLT1A1 LTR MaLR -30 398 1 2105 110 0 4 chr2 188198096 188198377 -62489477 + AluSq SINE Alu 1 280 -33 912 44 0 0 chr2 188198378 188198491 -62489363 + (GAAA)n Simple_repeat Simple_repeat 1 113 0 1807 207 72 11 chr2 188199127 188199571 -62488283 - LTR22 LTR ERVK 0 509 39 3449 36 7 0 chr2 188199572 188199990 -62487864 + L1PA5 LINE L1 5727 6147 -7 42 0 0 0 chr2 188199992 188200034 -62487820 + AT_rich Low_complexity Low_complexity 1 42 0 204 322 99 13 chr2 188200289 188200441 -62487413 - MIR SINE MIR 0 262 98 305 350 30 68 chr2 188200471 188200578 -62487276 - MIR SINE MIR -33 229 119 1678 152 25 48 chr2 188200578 188200893 -62486961 + AluJo SINE Alu 3 310 -2 305 350 30 68 chr2 188200893 188201022 -62486832 - MIR SINE MIR -143 119 2 1423 143 153 30 chr2 188201296 188201597 -62486257 - MER44D DNA MER2_type -1 608 1 1752 178 10 0 chr2 188202355 188202659 -62485195 + AluSx SINE Alu 1 307 -5 326 369 109 19 chr2 188202919 188203231 -62484623 + LTR67 LTR ERVL 2 341 -216 2624 152 6 17 chr2 188203345 188203812 -62484042 - L1MA4A LINE L1 -241 6062 5601 526 146 89 26 chr2 188203795 188203913 -62483941 - L1MC/D LINE L1 -774 5526 5411 * 321 155 0 0 chr2 188204225 188204283 -62483571 + (TGGA)n Simple_repeat Simple_repeat 4 61 0 381 22 0 0 chr2 188204513 188204559 -62483295 + (CA)n Simple_repeat Simple_repeat 1 46 0 236 203 31 0 chr2 188205408 188205472 -62482382 + GA-rich Low_complexity Low_complexity 3 68 0 23 0 0 0 chr2 188205501 188205524 -62482330 + AT_rich Low_complexity Low_complexity 1 23 0 30 0 0 0 chr2 188205571 188205601 -62482253 + AT_rich Low_complexity Low_complexity 1 30 0 345 100 0 0 chr2 188206490 188206540 -62481314 + (CA)n Simple_repeat Simple_repeat 2 51 0 2815 229 79 55 chr2 188207461 188208603 -62479251 + L1ME1 LINE L1 3192 4360 -1786 1649 229 23 9 chr2 188208588 188208678 -62479176 + L1ME1 LINE L1 5729 5816 -350 * 1724 174 25 0 chr2 188208678 188209028 -62478826 + AluJb SINE Alu 1 357 0 1649 229 23 9 chr2 188209028 188209363 -62478491 + L1ME1 LINE L1 5816 6161 -5 226 191 0 0 chr2 188209929 188209971 -62477883 + MLT1K LTR MaLR 547 588 0 713 250 9 38 chr2 188210475 188210607 -62477247 + MIR SINE MIR 29 163 -99 3514 114 26 32 chr2 188210607 188210680 -62477174 + L1MA8 LINE L1 5668 5740 -551 2035 143 32 27 chr2 188210680 188211050 -62476804 - THE1C LTR MaLR -3 372 1 3514 114 26 32 chr2 188211050 188211155 -62476699 + L1MA8 LINE L1 5740 5844 -447 2052 110 0 0 chr2 188211155 188211437 -62476417 + AluSc SINE Alu 21 302 -7 3514 114 26 32 chr2 188211437 188211873 -62475981 + L1MA8 LINE L1 5844 6279 -12 713 250 9 38 chr2 188211873 188211952 -62475902 + MIR SINE MIR 163 234 -28 5358 183 31 10 chr2 188212133 188212783 -62475071 + L1PA16 LINE L1 4039 4674 -1492 1848 161 3 7 chr2 188212783 188213093 -62474761 + AluSx SINE Alu 1 309 -3 5358 183 31 10 chr2 188213093 188214009 -62473845 + L1PA16 LINE L1 4674 5643 -523 1992 122 61 25 chr2 188214009 188214369 -62473485 + THE1C LTR MaLR 3 375 0 5358 183 31 10 chr2 188214369 188214532 -62473322 + L1PA16 LINE L1 5643 5801 -365 1162 172 157 16 chr2 188215011 188215445 -62472409 + MER39 LTR ERV1 1 552 -155 2327 152 13 10 chr2 188215466 188215854 -62472000 + L1PA16 LINE L1 5769 6157 -9 1624 149 44 10 chr2 188215957 188216252 -62471602 - L1PB4 LINE L1 -1 6155 5851 1727 127 3 60 chr2 188216889 188217203 -62470651 - AluSc SINE Alu -11 298 3 1790 133 11 0 chr2 188217252 188217522 -62470332 + AluSx SINE Alu 1 273 -39 224 114 45 0 chr2 188217523 188217567 -62470287 + GA-rich Low_complexity Low_complexity 3 48 0 5959 48 6 0 chr2 188218808 188220061 -62467793 - L1PA5 LINE L1 -167 5987 4726 1208 77 0 0 chr2 188220061 188220206 -62467648 + L1PA5 LINE L1 5991 6146 -8 464 264 46 6 chr2 188222127 188222301 -62465553 - Tigger8 DNA MER2_type -204 462 282 332 308 37 65 chr2 188222407 188222621 -62465233 + MLT1K LTR MaLR 326 533 -55 245 234 102 62 chr2 188222664 188222736 -62465118 - L1ME3A LINE L1 -76 6094 6013 1950 143 48 25 chr2 188222736 188223092 -62464762 - THE1B LTR MaLR 0 364 1 245 234 102 62 chr2 188223092 188223147 -62464707 - L1ME3A LINE L1 -157 6013 5962 435 228 141 83 chr2 188223236 188223477 -62464377 - L1MC5 LINE L1 -436 7525 7271 265 208 0 0 chr2 188223678 188223726 -62464128 - L1MC4a LINE L1 -1219 6589 6542 242 28 0 28 chr2 188224331 188224367 -62463487 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2417 31 0 17 chr2 188224369 188224659 -62463195 - AluY SINE Alu -26 285 1 303 214 0 0 chr2 188226245 188226301 -62461553 + MIR SINE MIR 207 262 0 605 365 21 23 chr2 188226603 188227036 -62460818 + HERV16 LTR ERVL 15 446 -4550 1984 131 14 3 chr2 188227636 188227927 -62459927 - AluSx SINE Alu -18 294 1 188 225 0 0 chr2 188227964 188228004 -62459850 + L2 LINE L2 3269 3308 -5 201 222 0 37 chr2 188228885 188228939 -62458915 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 1987 120 7 0 chr2 188229475 188229750 -62458104 + AluSq SINE Alu 1 277 -36 26 64 0 0 chr2 188229750 188229797 -62458057 + AT_rich Low_complexity Low_complexity 1 47 0 264 236 0 79 chr2 188230224 188230313 -62457541 - L2 LINE L2 -1 3312 3231 803 271 60 16 chr2 188230445 188230696 -62457158 + MIR SINE MIR 1 262 0 3105 79 56 5 chr2 188230875 188231261 -62456593 + MLT2A2 LTR ERVL 1 413 -40 238 25 25 25 chr2 188231261 188231301 -62456553 + (TA)n Simple_repeat Simple_repeat 2 41 0 3105 79 56 5 chr2 188231301 188231345 -62456509 + MLT2A2 LTR ERVL 413 453 0 271 167 83 0 chr2 188231498 188231570 -62456284 + MLT1K LTR MaLR 511 588 0 266 245 96 21 chr2 188232122 188232216 -62455638 + L2 LINE L2 3164 3264 -8 340 360 27 50 chr2 188234678 188234939 -62452915 - L2 LINE L2 -107 3165 2911 487 248 65 0 chr2 188235770 188235923 -62451931 - L1MC5 LINE L1 -122 7839 7677 218 239 14 0 chr2 188236137 188236208 -62451646 + (TA)n Simple_repeat Simple_repeat 2 73 0 628 241 8 38 chr2 188237791 188237924 -62449930 - L2 LINE L2 -4 3268 3140 519 221 72 56 chr2 188238022 188238271 -62449583 - MER112 DNA MER1_type 0 256 4 1474 167 10 47 chr2 188239743 188239861 -62447993 + AluJb SINE Alu 21 142 -170 225 0 0 0 chr2 188239861 188239886 -62447968 + (TA)n Simple_repeat Simple_repeat 2 26 0 1474 167 10 47 chr2 188239886 188240067 -62447787 + AluJb SINE Alu 142 309 -3 1511 187 95 12 chr2 188241291 188241628 -62446226 + MLT1A1 LTR MaLR 1 365 0 1466 50 0 0 chr2 188242995 188243174 -62444680 - AluY SINE Alu 0 311 133 3345 140 24 114 chr2 188243225 188243987 -62443867 + L1MA7 LINE L1 5538 6222 -69 1780 165 7 10 chr2 188243987 188244278 -62443576 + AluJb SINE Alu 1 290 -22 3345 140 24 114 chr2 188244278 188244339 -62443515 + L1MA7 LINE L1 6222 6287 -4 28 29 0 0 chr2 188244339 188244374 -62443480 + AT_rich Low_complexity Low_complexity 1 35 0 246 307 10 0 chr2 188244461 188244562 -62443292 + MER113 DNA MER1_type? 3 104 -417 213 333 162 18 chr2 188244879 188244990 -62442864 - L2 LINE L2 -9 3263 3137 874 136 0 0 chr2 188245220 188245338 -62442516 - FLAM_C SINE Alu -25 118 1 390 196 87 82 chr2 188245406 188245590 -62442264 + L1ME4a LINE L1 5937 6121 0 414 382 30 20 chr2 188245918 188246117 -62441737 - MIR3 SINE MIR 0 208 8 829 304 156 14 chr2 188246650 188247137 -62440717 + Tigger8 DNA MER2_type 26 581 -85 326 231 142 60 chr2 188247960 188248094 -62439760 - MIR SINE MIR -73 189 45 31 26 0 0 chr2 188248442 188248480 -62439374 + AT_rich Low_complexity Low_complexity 1 38 0 383 94 0 0 chr2 188248481 188248534 -62439320 - MADE1 DNA Mariner -27 53 1 26 0 0 0 chr2 188248645 188248671 -62439183 + AT_rich Low_complexity Low_complexity 1 26 0 2714 71 8 11 chr2 188249030 188249394 -62438460 + L1PA7 LINE L1 5785 6147 -7 228 333 56 8 chr2 188250838 188250964 -62436890 + HAL1 LINE L1 2 133 -2374 1863 197 21 10 chr2 188251333 188251719 -62436135 + MLT1B LTR MaLR 1 390 0 1834 172 7 0 chr2 188252122 188252418 -62435436 + AluSx SINE Alu 1 298 -14 228 182 0 0 chr2 188252582 188252626 -62435228 + A-rich Low_complexity Low_complexity 1 44 0 1887 193 14 34 chr2 188253248 188253324 -62434530 + L1MB8 LINE L1 5748 5824 -354 2022 113 7 29 chr2 188253324 188253633 -62434221 + AluSq SINE Alu 1 302 -11 1887 193 14 34 chr2 188253633 188253996 -62433858 + L1MB8 LINE L1 5824 6178 0 216 0 0 0 chr2 188255737 188255761 -62432093 + (TAAAAA)n Simple_repeat Simple_repeat 2 25 0 1621 174 42 70 chr2 188256093 188256479 -62431375 + THE1C LTR MaLR 1 375 0 236 209 109 91 chr2 188257711 188257821 -62430033 - MIR SINE MIR -56 206 95 200 149 21 0 chr2 188257930 188257977 -62429877 + T-rich Low_complexity Low_complexity 3 50 0 1722 118 4 16 chr2 188258085 188258340 -62429514 - AluSx SINE Alu -18 294 43 706 112 0 0 chr2 188258340 188258438 -62429416 - AluS SINE Alu -214 98 1 349 298 51 79 chr2 188258611 188258886 -62428968 + MLT1L LTR MaLR 108 455 -160 863 50 0 33 chr2 188259014 188259135 -62428719 - L1PA3 LINE L1 0 6155 6039 484 333 201 12 chr2 188259142 188259481 -62428373 - L2 LINE L2 -57 3256 2854 483 242 39 7 chr2 188260496 188260649 -62427205 + L1MC4 LINE L1 7099 7256 -786 477 284 126 42 chr2 188260766 188260886 -62426968 + L1MC5 LINE L1 7274 7382 -579 2272 94 7 7 chr2 188260886 188261193 -62426661 + AluSx SINE Alu 5 311 -1 477 284 126 42 chr2 188261193 188261666 -62426188 + L1MC5 LINE L1 7382 7917 -44 314 342 137 17 chr2 188262132 188262366 -62425488 + L1ME LINE L1 5545 5806 -315 519 204 157 0 chr2 188263064 188263172 -62424682 - FLAM_C SINE Alu -16 127 3 240 224 0 0 chr2 188263309 188263358 -62424496 - L1M4 LINE L1 -2579 3567 3519 259 233 23 12 chr2 188263358 188263444 -62424410 + (TG)n Simple_repeat Simple_repeat 2 88 0 441 267 102 16 chr2 188263549 188263864 -62423990 - L1M4 LINE L1 -2757 3389 3048 1401 164 30 15 chr2 188265399 188265662 -62422192 - MER65A LTR ERV1 -14 431 165 800 179 26 7 chr2 188265657 188265808 -62422046 - MSTB LTR MaLR -272 154 1 * 185 364 25 25 chr2 188265810 188265928 -62421926 - L2 LINE L2 -609 2705 2588 505 222 32 16 chr2 188266308 188266434 -62421420 + MIR SINE MIR 116 243 -19 1682 65 0 0 chr2 188268328 188268560 -62419294 + AluY SINE Alu 84 315 0 468 0 0 0 chr2 188270273 188270325 -62417529 + (CA)n Simple_repeat Simple_repeat 2 53 0 180 182 76 45 chr2 188270354 188270420 -62417434 + MIR SINE MIR 109 176 -86 242 370 58 6 chr2 188270927 188271047 -62416807 - L2 LINE L2 -1422 1892 1759 5813 35 15 10 chr2 188271047 188271102 -62416752 + L1PA5 LINE L1 5432 5485 -669 2822 3 0 3 chr2 188271102 188271409 -62416445 + AluYa5 SINE Alu 1 306 -5 5813 35 15 10 chr2 188271409 188272069 -62415785 + L1PA5 LINE L1 5485 6151 -3 242 370 58 6 chr2 188272069 188272121 -62415733 - L2 LINE L2 -1555 1759 1711 1602 237 117 10 chr2 188272584 188273107 -62414747 + L1MC4a LINE L1 7229 7807 -1 183 42 0 0 chr2 188273128 188273152 -62414702 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 817 291 91 23 chr2 188273189 188273349 -62414505 - MLT1I LTR MaLR -8 401 253 4029 80 26 0 chr2 188273349 188273889 -62413965 - MER41A LTR ERV1 0 554 1 817 291 91 23 chr2 188273889 188274079 -62413775 - MLT1I LTR MaLR -156 253 27 275 338 206 0 chr2 188274098 188274302 -62413552 + L2 LINE L2 2098 2343 -971 341 307 36 29 chr2 188274327 188274467 -62413387 + L2 LINE L2 3173 3313 0 969 254 100 51 chr2 188274614 188275185 -62412669 - L2 LINE L2 -6 3307 2709 215 197 82 33 chr2 188275214 188275275 -62412579 - L2 LINE L2 -594 2720 2657 1485 245 137 10 chr2 188275276 188275692 -62412162 - MLT1F1 LTR MaLR 0 567 99 1101 162 0 0 chr2 188275782 188275949 -62411905 - FAM SINE Alu -9 40 1 581 182 8 0 chr2 188275972 188276093 -62411761 - Zaphod DNA AcHobo -3002 1029 908 2177 152 46 31 chr2 188276128 188276662 -62411192 - MLT2A2 LTR ERVL 0 554 5 322 161 134 13 chr2 188276687 188276836 -62411018 - Zaphod DNA AcHobo -3159 872 706 697 139 0 41 chr2 188276839 188276961 -62410893 + FLAM_A SINE Alu 18 134 -8 226 223 138 32 chr2 188276976 188277070 -62410784 - Zaphod DNA AcHobo -3306 725 622 23 0 0 0 chr2 188277076 188277099 -62410755 + AT_rich Low_complexity Low_complexity 1 23 0 1392 260 103 0 chr2 188277142 188277550 -62410304 - Zaphod DNA AcHobo -3411 620 171 407 245 9 28 chr2 188278793 188278899 -62408955 - MIR3 SINE MIR -29 179 76 799 255 82 0 chr2 188278969 188279165 -62408689 + MIR SINE MIR 19 230 -32 263 182 18 36 chr2 188279168 188279223 -62408631 + MER91 DNA MER1_type 77 130 -10 890 173 7 135 chr2 188279249 188279351 -62408503 + L1MD3 LINE L1 7744 7857 -138 1854 153 21 0 chr2 188279351 188279638 -62408216 - AluJo SINE Alu -19 293 1 890 173 7 135 chr2 188279638 188279718 -62408136 + L1MD3 LINE L1 7857 7878 -117 329 179 26 0 chr2 188279718 188279796 -62408058 + L1MA7 LINE L1 6205 6284 -7 890 173 7 135 chr2 188279796 188279901 -62407953 + L1MD3 LINE L1 7878 7995 0 665 219 34 0 chr2 188279921 188280040 -62407814 + FLAM_A SINE Alu 1 123 -10 327 301 5 101 chr2 188280890 188281099 -62406755 + MER5A DNA MER1_type 1 189 0 22 0 0 0 chr2 188281285 188281307 -62406547 + AT_rich Low_complexity Low_complexity 1 22 0 231 146 0 0 chr2 188281329 188281370 -62406484 + (TATATG)n Simple_repeat Simple_repeat 5 45 0 4817 168 51 51 chr2 188281379 188281539 -62406315 - L1MA9 LINE L1 -84 6228 6070 2051 124 0 0 chr2 188281539 188281841 -62406013 - AluSx SINE Alu 0 302 1 4817 168 51 51 chr2 188281841 188283572 -62404282 - L1MA9 LINE L1 -242 6070 4329 3903 267 159 15 chr2 188283986 188285586 -62402268 - L2 LINE L2 -140 3173 1353 437 291 63 0 chr2 188288217 188288344 -62399510 + MIR SINE MIR 20 154 -108 451 274 96 14 chr2 188288658 188288804 -62399050 - MER5A DNA MER1_type 0 189 32 197 384 82 37 chr2 188288933 188289418 -62398436 - L2 LINE L2 -668 2646 2140 23 68 0 0 chr2 188289513 188289557 -62398297 + AT_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr2 188290064 188290093 -62397761 + AT_rich Low_complexity Low_complexity 1 29 0 861 139 5 64 chr2 188290290 188290477 -62397377 - MLT1D LTR MaLR -279 226 51 1659 244 112 29 chr2 188290781 188291213 -62396641 + MER20B DNA MER1_type 47 554 -229 2384 87 3 3 chr2 188291213 188291522 -62396332 + AluSp SINE Alu 1 309 -4 1659 244 112 29 chr2 188291522 188291752 -62396102 + MER20B DNA MER1_type 554 764 -19 1876 118 41 4 chr2 188292564 188292867 -62394987 - AluSx SINE Alu 0 313 1 1230 178 17 13 chr2 188293594 188293824 -62394030 - AluJo SINE Alu -32 280 50 436 227 18 58 chr2 188293934 188294112 -62393742 + L1M4c LINE L1 2532 2721 -4127 2563 186 68 66 chr2 188294112 188294234 -62393620 - MER50 LTR ERV1 -2 732 612 1966 123 10 23 chr2 188294234 188294534 -62393320 + AluSg SINE Alu 1 296 -14 2563 186 68 66 chr2 188294534 188295128 -62392726 - MER50 LTR ERV1 -122 612 14 3277 195 130 6 chr2 188295135 188296067 -62391787 + L1 LINE L1 3433 4482 -3083 3582 215 143 18 chr2 188296067 188297007 -62390847 + L1M4c LINE L1 2 1058 -5791 * 8182 191 53 11 chr2 188296986 188298876 -62388978 + L1M4c LINE L1 3158 5128 -1720 879 178 123 0 chr2 188298851 188299070 -62388784 + L1M4c LINE L1 5511 5756 -1092 * 6194 190 33 31 chr2 188299073 188299483 -62388371 + L1 LINE L1 5249 5657 -1908 1685 195 7 17 chr2 188299483 188299785 -62388069 + AluJo SINE Alu 1 299 -13 6194 190 33 31 chr2 188299785 188300903 -62386951 + L1 LINE L1 5657 6780 -785 21 36 0 0 chr2 188301664 188301692 -62386162 + AT_rich Low_complexity Low_complexity 1 28 0 1879 63 8 32 chr2 188301827 188302080 -62385774 + AluY SINE Alu 62 308 -3 4200 136 42 18 chr2 188302339 188303021 -62384833 + L1P3 LINE L1 8 706 -5755 1975 267 39 30 chr2 188303121 188303875 -62383979 + L1M4c LINE L1 1080 1839 -4545 543 277 114 37 chr2 188304063 188304784 -62383070 + L1M4c LINE L1 1898 2621 -3761 2798 93 62 42 chr2 188304960 188305413 -62382441 - L1P3 LINE L1 -4955 1506 1045 1919 228 49 44 chr2 188305410 188305714 -62382140 - L1ME1 LINE L1 -264 5902 5592 * 2187 109 3 0 chr2 188305714 188306007 -62381847 + AluSx SINE Alu 1 294 -18 1919 228 49 44 chr2 188306007 188306276 -62381578 - L1ME1 LINE L1 -574 5592 5326 362 211 82 68 chr2 188307247 188307394 -62380460 + MIR3 SINE MIR 7 155 -53 192 182 15 136 chr2 188307415 188307481 -62380373 - MIR3 SINE MIR -32 176 119 207 0 0 0 chr2 188308322 188308345 -62379509 + (A)n Simple_repeat Simple_repeat 1 23 0 1846 219 48 18 chr2 188308405 188308847 -62379007 - MER21B LTR ERV1 -264 599 145 643 260 105 6 chr2 188309429 188309610 -62378244 - MIR SINE MIR -13 249 51 281 92 46 0 chr2 188310023 188310088 -62377766 + L1PA16 LINE L1 5952 6019 -147 2240 111 0 0 chr2 188310347 188310667 -62377187 - AluSx SINE Alu 0 312 4 1971 158 0 0 chr2 188310778 188311089 -62376765 - AluJb SINE Alu -1 311 1 931 101 21 74 chr2 188312234 188312423 -62375431 - L1MB1 LINE L1 -1 6167 5989 283 366 61 6 chr2 188312837 188313001 -62374853 - MIR SINE MIR -43 219 47 4369 134 9 6 chr2 188313843 188315064 -62372790 - L1M1 LINE L1 -547 5758 4532 8530 94 11 9 chr2 188315165 188315214 -62372640 - L1P LINE L1 -1280 4866 4819 243 0 0 0 chr2 188315214 188315241 -62372613 + (TTCTG)n Simple_repeat Simple_repeat 3 29 0 8530 94 11 9 chr2 188315241 188316494 -62371360 - L1P LINE L1 -1327 4819 3561 983 251 82 44 chr2 188316763 188317153 -62370701 - MLT1I LTR MaLR 0 409 5 387 277 88 25 chr2 188317193 188317352 -62370502 + MLT1K LTR MaLR 412 580 -8 468 296 70 15 chr2 188317939 188318143 -62369711 + MIR SINE MIR 33 246 -16 207 0 0 0 chr2 188318349 188318372 -62369482 + (CA)n Simple_repeat Simple_repeat 2 24 0 198 0 0 0 chr2 188318788 188318810 -62369044 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 303 28 0 0 chr2 188318809 188318845 -62369009 + (GA)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr2 188319163 188319185 -62368669 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr2 188320396 188320439 -62367415 + AT_rich Low_complexity Low_complexity 1 43 0 617 230 189 23 chr2 188321009 188321226 -62366628 + MIR SINE MIR 10 262 0 844 194 138 47 chr2 188321543 188321863 -62365991 - Charlie1 DNA MER1_type 0 2761 2413 3651 165 8 4 chr2 188321963 188322986 -62364868 - L1PA7 LINE L1 -205 5949 4926 9986 112 3 6 chr2 188323089 188324662 -62363192 + L1P LINE L1 1393 2961 -3185 664 132 0 9 chr2 188324762 188324876 -62362978 - L1MB1 LINE L1 -263 5905 5793 493 227 0 0 chr2 188324877 188324974 -62362880 + L1MB1 LINE L1 5671 5767 -401 2676 36 0 0 chr2 188325507 188325811 -62362043 - AluY SINE Alu -7 304 1 1702 81 56 0 chr2 188326028 188326262 -62361592 - AluY SINE Alu -64 247 1 9154 60 7 28 chr2 188327342 188328550 -62359304 - SVA Other Other -17 1369 188 1343 188 0 32 chr2 188329781 188329880 -62357974 - Tigger1 DNA MER2_type -2104 314 213 1956 141 7 0 chr2 188329880 188330177 -62357677 + AluSg SINE Alu 3 301 -9 1343 188 0 32 chr2 188330177 188330386 -62357468 - Tigger1 DNA MER2_type -2205 213 16 1836 236 6 0 chr2 188330402 188330872 -62356982 + L1MA7 LINE L1 5527 5999 -292 488 171 23 0 chr2 188331191 188331279 -62356575 - MIR SINE MIR -88 174 85 204 331 16 48 chr2 188331387 188331511 -62356343 - L2 LINE L2 -211 3061 2942 293 330 84 22 chr2 188333674 188333853 -62354001 + MIR SINE MIR 21 210 -52 24 0 0 0 chr2 188334150 188334174 -62353680 + AT_rich Low_complexity Low_complexity 1 24 0 2795 107 7 32 chr2 188334188 188334629 -62353225 + MSTB1 LTR MaLR 1 430 -2 609 280 33 20 chr2 188334927 188335077 -62352777 - L2 LINE L2 0 3272 3121 4670 45 2 0 chr2 188335482 188336098 -62351756 + L1P LINE L1 3302 3918 -2228 244 318 0 0 chr2 188337629 188337717 -62350137 + MIR SINE MIR 161 248 -14 28 0 0 0 chr2 188337892 188337920 -62349934 + AT_rich Low_complexity Low_complexity 1 28 0 741 315 14 10 chr2 188337928 188338168 -62349686 - MIR SINE MIR -21 241 4 222 167 0 0 chr2 188338320 188338356 -62349498 + L2 LINE L2 3190 3225 -47 312 237 173 96 chr2 188338443 188338860 -62348994 + MLT1J2 LTR MaLR 1 449 -1 559 310 55 9 chr2 188339260 188339532 -62348322 + L2 LINE L2 2698 2978 -335 696 164 63 0 chr2 188339992 188340151 -62347703 + L1ME3 LINE L1 5780 5948 -214 664 117 0 29 chr2 188340152 188340255 -62347599 + AluS SINE Alu 1 100 -212 3206 140 12 6 chr2 188340355 188341218 -62346636 + L1P3 LINE L1 4786 5650 -504 2278 178 84 4 chr2 188341218 188341742 -62346112 - LTR13 LTR ERVK 0 1007 442 276 30 0 0 chr2 188342361 188342394 -62345460 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 22 35 0 0 chr2 188342630 188342659 -62345195 + AT_rich Low_complexity Low_complexity 1 29 0 349 310 150 0 chr2 188343639 188343739 -62344115 - L2 LINE L2 0 3272 3158 194 316 63 13 chr2 188343768 188343847 -62344007 + MIR3 SINE MIR 112 194 -14 22 0 0 0 chr2 188345427 188345449 -62342405 + AT_rich Low_complexity Low_complexity 1 22 0 211 255 184 20 chr2 188345724 188345822 -62342032 - MIR3 SINE MIR -93 115 2 267 364 107 34 chr2 188346663 188346869 -62340985 + L2 LINE L2 2966 3186 -86 15444 86 3 4 chr2 188347402 188349684 -62338170 - L1P LINE L1 -1471 4675 2396 1032 230 139 12 chr2 188351167 188351419 -62336435 + AluJo SINE Alu 2 285 -17 24 32 0 0 chr2 188351431 188351462 -62336392 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr2 188354423 188354454 -62333400 + AT_rich Low_complexity Low_complexity 1 31 0 268 266 106 18 chr2 188354672 188354785 -62333069 - L2 LINE L2 -1 3312 3190 1975 193 12 47 chr2 188354879 188355365 -62332489 + L1MD2 LINE L1 5534 6002 -357 454 268 198 37 chr2 188355366 188355757 -62332097 - L2 LINE L2 -148 3165 2727 257 262 16 0 chr2 188355764 188355825 -62332029 + L2 LINE L2 3249 3310 -3 * 288 274 0 36 chr2 188355818 188355902 -62331952 - L2 LINE L2 -585 2729 2649 827 277 75 7 chr2 188355910 188356265 -62331589 + L1MC4a LINE L1 5529 5820 -301 25 51 0 0 chr2 188356508 188356547 -62331307 + AT_rich Low_complexity Low_complexity 1 39 0 311 303 25 76 chr2 188356555 188356753 -62331101 + MIR3 SINE MIR 8 195 -13 195 295 16 0 chr2 188356710 188356771 -62331083 + L2 LINE L2 1527 1588 -1726 * 252 77 26 0 chr2 188356781 188356820 -62331034 - MLT1B LTR MaLR 0 390 351 271 225 124 124 chr2 188358167 188358385 -62329469 - MER20 DNA MER1_type -1 218 1 307 351 51 37 chr2 188358546 188358842 -62329012 - LTR16C LTR ERVL -90 401 102 216 410 10 0 chr2 188359194 188359294 -62328560 + L3 LINE CR1 1429 1529 -48 422 284 49 0 chr2 188361091 188361193 -62326661 + L2 LINE L2 3147 3253 -19 182 286 119 48 chr2 188361596 188361722 -62326132 - MIR SINE MIR -123 139 5 21 0 0 0 chr2 188361756 188361777 -62326077 + AT_rich Low_complexity Low_complexity 1 21 0 2293 112 0 0 chr2 188361951 188362246 -62325608 + AluSx SINE Alu 3 297 -15 1103 154 11 0 chr2 188362246 188362421 -62325433 + AluSg/x SINE Alu 135 311 -1 338 94 19 0 chr2 188363057 188363110 -62324744 + L1MA9 LINE L1 6254 6307 -5 407 337 11 27 chr2 188363253 188363401 -62324453 - MIR SINE MIR -63 145 30 1057 167 3 2 chr2 188413412 188414636 -62273218 + ALR/Alpha Satellite centromeric 1 1224 -43 2345 74 3 0 chr2 188415005 188415290 -62272564 + AluY SINE Alu 1 286 -25 282 372 28 35 chr2 188415306 188415451 -62272403 + MIR3 SINE MIR 17 160 -48 359 274 46 73 chr2 188415451 188415710 -62272144 - MER112 DNA MER1_type 0 256 5 337 183 0 0 chr2 188416641 188416712 -62271142 + AluS SINE Alu 229 299 -2 339 261 101 34 chr2 188417024 188417143 -62270711 + MIR SINE MIR 136 262 0 21 36 0 0 chr2 188417168 188417196 -62270658 + AT_rich Low_complexity Low_complexity 1 28 0 314 353 59 7 chr2 188418049 188418185 -62269669 + MIR3 SINE MIR 4 146 -62 308 260 10 48 chr2 188418221 188418325 -62269529 + MER94 DNA DNA 4 103 -31 2283 89 13 10 chr2 188419079 188419383 -62268471 + AluSc SINE Alu 1 305 -4 1863 169 0 19 chr2 188420216 188420523 -62267331 - AluJb SINE Alu -11 301 1 22 0 0 0 chr2 188420525 188420547 -62267307 + AT_rich Low_complexity Low_complexity 1 22 0 763 164 0 8 chr2 188420552 188420680 -62267174 - FLAM_C SINE Alu -16 127 1 21 36 0 0 chr2 188420817 188420845 -62267009 + AT_rich Low_complexity Low_complexity 1 28 0 291 281 144 20 chr2 188421052 188421198 -62266656 + L2 LINE L2 1045 1208 -2106 215 203 116 29 chr2 188421292 188421361 -62266493 - MIR SINE MIR -70 192 118 1056 136 7 13 chr2 188421539 188421693 -62266161 - AluSx SINE Alu -159 153 1 385 230 115 18 chr2 188422321 188422434 -62265420 + L2 LINE L2 2571 2694 -620 2341 93 3 6 chr2 188422437 188422748 -62265106 - AluSp SINE Alu -3 310 1 364 202 81 10 chr2 188422801 188422900 -62264954 + L1MC4a LINE L1 7703 7808 0 562 307 45 38 chr2 188422912 188423177 -62264677 + L2 LINE L2 2743 3009 -304 1912 118 4 7 chr2 188423612 188423882 -62263972 + AluSq SINE Alu 1 269 -44 282 173 25 25 chr2 188423886 188423967 -62263887 + GA-rich Low_complexity Low_complexity 1 81 0 3654 191 79 15 chr2 188424067 188425152 -62262702 - L1P4 LINE L1 -712 5454 4314 3315 136 29 5 chr2 188425156 188425781 -62262073 - L1MA4A LINE L1 -360 5943 5304 1492 189 64 11 chr2 188425805 188426069 -62261785 - AluSg SINE Alu -26 284 7 331 188 107 62 chr2 188426322 188426434 -62261420 - Charlie1 DNA MER1_type 0 2761 2645 2009 119 23 18 chr2 188426534 188426967 -62260887 - L1P4 LINE L1 -569 5597 5157 * 4419 185 59 51 chr2 188426943 188427283 -62260571 - L1MA4A LINE L1 -1459 4687 4351 2117 116 16 23 chr2 188427283 188427593 -62260261 - AluSx SINE Alu -4 308 1 4419 185 59 51 chr2 188427593 188428497 -62259357 - L1MA4A LINE L1 -1795 4351 3433 2052 243 42 10 chr2 188428498 188429168 -62258686 + L1MA4A LINE L1 2737 3427 -2719 25 31 0 0 chr2 188429178 188429210 -62258644 + AT_rich Low_complexity Low_complexity 1 32 0 295 359 6 31 chr2 188429224 188429383 -62258471 - MER5A DNA MER1_type -22 167 13 2447 58 3 0 chr2 188429385 188429679 -62258175 + AluY SINE Alu 1 295 -16 1045 133 12 24 chr2 188429924 188430090 -62257764 - FRAM SINE Alu 0 176 13 779 226 225 48 chr2 188430192 188430558 -62257296 + L2 LINE L2 2591 2891 -422 2013 170 54 79 chr2 188430558 188430896 -62256958 + MLT1D LTR MaLR 2 324 -181 2174 94 0 33 chr2 188430896 188431203 -62256651 + AluSg SINE Alu 1 297 -13 2013 170 54 79 chr2 188431203 188431381 -62256473 + MLT1D LTR MaLR 324 505 0 779 226 225 48 chr2 188431381 188431605 -62256249 + L2 LINE L2 2891 3308 -5 21 0 0 0 chr2 188432013 188432034 -62255820 + AT_rich Low_complexity Low_complexity 1 21 0 450 127 0 25 chr2 188432109 188432188 -62255666 + AluJ/FRAM SINE Alu 230 306 -6 1339 187 4 34 chr2 188433229 188433496 -62254358 - AluJb SINE Alu 0 312 54 417 266 18 18 chr2 188433498 188433716 -62254138 + AluJb SINE Alu 1 218 -94 1591 182 7 0 chr2 188433827 188434102 -62253752 + AluJb SINE Alu 31 307 -5 422 132 0 0 chr2 188434112 188434180 -62253674 - AluJb SINE Alu -244 68 1 1024 169 124 2 chr2 188434268 188434540 -62253314 - MER33 DNA MER1_type -30 294 1 1057 221 132 22 chr2 188434873 188435145 -62252709 + AluJo SINE Alu 1 302 0 26 0 0 0 chr2 188435222 188435248 -62252606 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 188435752 188435773 -62252081 + AT_rich Low_complexity Low_complexity 1 21 0 632 256 147 0 chr2 188435801 188435957 -62251897 - MER5A DNA MER1_type -1 188 10 400 263 40 26 chr2 188436329 188436481 -62251373 + MIR SINE MIR 1 154 -108 2092 113 3 3 chr2 188436695 188436996 -62250858 + AluSx SINE Alu 2 302 -10 186 43 0 0 chr2 188437919 188437942 -62249912 + (CCA)n Simple_repeat Simple_repeat 1 23 0 1686 149 18 7 chr2 188438191 188438509 -62249345 - AluSx SINE Alu 0 323 3 1115 48 0 0 chr2 188438529 188438655 -62249199 + AluY SINE Alu 100 225 -86 21 57 0 0 chr2 188438838 188438873 -62248981 + AT_rich Low_complexity Low_complexity 1 35 0 1101 191 0 47 chr2 188438880 188439056 -62248798 - AluJo SINE Alu -4 308 144 2254 84 0 45 chr2 188439056 188439367 -62248487 - AluSg SINE Alu -13 297 1 1101 191 0 47 chr2 188439367 188439425 -62248429 - AluJo SINE Alu -168 144 85 449 197 0 0 chr2 188439445 188439521 -62248333 - FRAM SINE Alu -82 94 19 522 255 64 20 chr2 188440876 188441080 -62246774 + LTR7 LTR ERV1 238 450 0 2164 103 0 3 chr2 188441293 188441616 -62246238 + AluSc SINE Alu 1 322 0 393 39 0 0 chr2 188442099 188442150 -62245704 + (T)n Simple_repeat Simple_repeat 1 51 0 3020 139 23 27 chr2 188442317 188443222 -62244632 - HERVH LTR ERV1 -6603 1110 1 2208 101 169 5 chr2 188443224 188443518 -62244336 - LTR7 LTR ERV1 -2 448 75 2532 78 0 0 chr2 188443518 188443827 -62244027 - AluSp SINE Alu -4 309 1 2208 101 169 5 chr2 188443827 188443917 -62243937 - LTR7 LTR ERV1 -375 75 1 656 66 51 29 chr2 188443928 188444065 -62243789 + CT-rich Low_complexity Low_complexity 4 143 0 253 310 70 10 chr2 188444109 188444209 -62243645 + L2 LINE L2 2185 2290 -1024 240 181 84 36 chr2 188445669 188445752 -62242102 - LTR33 LTR ERVL -20 501 415 519 289 76 28 chr2 188445821 188446032 -62241822 + MIR SINE MIR 10 230 -32 402 278 91 30 chr2 188446147 188446345 -62241509 - MLT1J LTR MaLR -10 501 292 2351 102 3 6 chr2 188446500 188446813 -62241041 - AluSx SINE Alu 0 312 1 552 196 0 20 chr2 188446824 188446977 -62240877 + CT-rich Low_complexity Low_complexity 4 153 0 1680 171 11 4 chr2 188446986 188447267 -62240587 - AluJo SINE Alu -13 299 17 447 141 0 0 chr2 188447271 188447342 -62240512 + FLAM SINE Alu 63 133 -10 25 31 0 0 chr2 188448327 188448359 -62239495 + AT_rich Low_complexity Low_complexity 1 32 0 587 303 22 27 chr2 188452145 188452330 -62235524 + MIR3 SINE MIR 23 206 -2 24 0 0 0 chr2 188453119 188453143 -62234711 + AT_rich Low_complexity Low_complexity 1 24 0 328 229 12 12 chr2 188453850 188453933 -62233921 + Tigger5 DNA MER2_type 1 83 -2240 1449 124 22 4 chr2 188454965 188455191 -62232663 - MER30 DNA MER1_type 0 230 1 1807 152 7 7 chr2 188455604 188455900 -62231954 - AluJb SINE Alu -15 297 2 872 130 0 51 chr2 188456274 188456412 -62231442 + FLAM_C SINE Alu 2 132 -1 254 278 151 32 chr2 188456617 188456743 -62231111 + MIR SINE MIR 122 262 0 1279 173 58 0 chr2 188457375 188457635 -62230219 + AluJb SINE Alu 14 288 -24 219 139 0 0 chr2 188457635 188457671 -62230183 + (GGGA)n Simple_repeat Simple_repeat 3 38 0 667 143 24 8 chr2 188460282 188460408 -62227446 + MLT1C LTR MaLR 6 133 -334 * 1593 219 70 35 chr2 188460406 188460863 -62226991 - MLT1D LTR MaLR -32 473 1 583 161 144 17 chr2 188460935 188461053 -62226801 + FLAM_C SINE Alu 1 133 0 2437 77 3 3 chr2 188461315 188461625 -62226229 + AluSg SINE Alu 1 310 0 327 82 0 0 chr2 188461695 188461747 -62226107 + L1PA5 LINE L1 6077 6145 -23 299 297 93 8 chr2 188461878 188461996 -62225858 + L2 LINE L2 3143 3270 -2 1568 212 120 18 chr2 188462078 188462568 -62225286 + L1ME1 LINE L1 5622 6161 -5 21 0 0 0 chr2 188462965 188462986 -62224868 + AT_rich Low_complexity Low_complexity 1 21 0 837 256 163 25 chr2 188463305 188463747 -62224107 - MLT1H LTR MaLR 0 549 47 722 158 36 0 chr2 188464112 188464251 -62223603 + L1MB3 LINE L1 6039 6182 -1 273 118 0 0 chr2 188464358 188464409 -62223445 + (CTTG)n Simple_repeat Simple_repeat 2 52 0 311 211 0 0 chr2 188464425 188464496 -62223358 + A-rich Low_complexity Low_complexity 1 71 0 301 238 24 24 chr2 188464478 188464642 -62223212 + GA-rich Low_complexity Low_complexity 3 166 0 * 5787 120 0 18 chr2 188464862 188465821 -62222033 + HERVH LTR ERV1 2061 3002 -4711 2977 169 51 2 chr2 188465793 188466362 -62221492 + HERVH LTR ERV1 3140 3736 -3977 * 6672 103 2 5 chr2 188466372 188467385 -62220469 + HERVH LTR ERV1 3995 4992 -2721 2849 71 7 12 chr2 188467364 188467784 -62220070 + HERVH LTR ERV1 7296 7713 0 * 2331 78 201 3 chr2 188467784 188468158 -62219696 + LTR7 LTR ERV1 1 448 -2 864 286 140 29 chr2 188468161 188468605 -62219249 - L2 LINE L2 -1257 2057 1565 348 282 10 10 chr2 188468676 188468779 -62219075 - MIR SINE MIR -1 261 159 3409 124 10 4 chr2 188468779 188469287 -62218567 - MER9 LTR ERVK 0 511 1 2061 82 11 0 chr2 188469287 188469566 -62218288 - HERVK9 LTR ERVK 0 5916 5635 5223 95 4 0 chr2 188469662 188470401 -62217453 - HERVK9 LTR ERVK -282 5634 4893 6163 61 0 0 chr2 188470401 188471191 -62216663 - HERVK9 LTR ERVK -3703 2213 1424 3804 87 12 21 chr2 188471189 188471762 -62216092 - HERVK9 LTR ERVK -5348 568 1 * 2158 135 0 6 chr2 188471762 188472103 -62215751 - MER9 LTR ERVK 0 511 173 491 173 39 24 chr2 188472203 188472330 -62215524 - MLT1E2-int LTR MaLR -1242 129 1 1455 222 129 42 chr2 188472330 188472905 -62214949 - MLT1E2 LTR MaLR 0 626 19 2069 139 0 0 chr2 188472907 188473202 -62214652 + AluSx SINE Alu 1 295 -17 1499 150 68 39 chr2 188473412 188473692 -62214162 + AluJb SINE Alu 2 289 -23 706 200 53 7 chr2 188473750 188473900 -62213954 + FRAM SINE Alu 5 161 -5 225 0 0 0 chr2 188474345 188474370 -62213484 + (TA)n Simple_repeat Simple_repeat 1 25 0 183 325 44 97 chr2 188475074 188475188 -62212666 + L2 LINE L2 3125 3232 -40 969 175 18 6 chr2 188475300 188475466 -62212388 - FRAM SINE Alu -4 172 5 888 230 93 93 chr2 188475519 188476024 -62211830 + MLT1D LTR MaLR 1 505 0 1391 209 90 9 chr2 188476167 188476512 -62211342 - MLT1D LTR MaLR -5 500 128 2068 106 3 3 chr2 188476661 188476945 -62210909 + AluSq SINE Alu 23 306 -7 1367 228 129 26 chr2 188477058 188477515 -62210339 - MLT1D LTR MaLR 0 505 2 1168 266 162 19 chr2 188477594 188478543 -62209311 - HAL1 LINE L1 -302 2205 1121 2109 117 10 3 chr2 188478584 188478875 -62208979 - AluSx SINE Alu -15 297 5 2508 66 0 0 chr2 188478974 188479279 -62208575 + AluY SINE Alu 1 305 -6 429 329 185 30 chr2 188479545 188479843 -62208011 - HAL1 LINE L1 -1838 669 326 810 284 73 56 chr2 188480028 188480471 -62207383 - MER77 LTR ERV1 -7 598 223 856 159 243 0 chr2 188481374 188481563 -62206291 - MER46A DNA MER2_type 0 236 2 2206 120 0 0 chr2 188482054 188482345 -62205509 + AluSx SINE Alu 2 292 -20 441 155 36 0 chr2 188482564 188482648 -62205206 - L1P4 LINE L1 -545 5621 5535 21 0 0 0 chr2 188482840 188482861 -62204993 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 188483331 188483353 -62204501 + AT_rich Low_complexity Low_complexity 1 22 0 2276 102 3 13 chr2 188483353 188483668 -62204186 - AluSx SINE Alu 0 312 1 292 255 61 10 chr2 188483787 188483868 -62203986 - MIR3 SINE MIR -1 207 119 1673 185 13 26 chr2 188483868 188484181 -62203673 + AluJo SINE Alu 1 309 -3 292 255 61 10 chr2 188484181 188484197 -62203657 - MIR3 SINE MIR -89 119 105 715 131 15 15 chr2 188484987 188485124 -62202730 + CT-rich Low_complexity Low_complexity 2 138 0 2223 84 23 16 chr2 188485132 188485440 -62202414 - AluY SINE Alu -1 310 1 383 224 99 33 chr2 188485728 188485880 -62201974 - L1MC5 LINE L1 -50 7911 7750 255 103 0 0 chr2 188486023 188486062 -62201792 + (TAA)n Simple_repeat Simple_repeat 2 40 0 1938 105 3 44 chr2 188486462 188486757 -62201097 + AluSx SINE Alu 13 295 -17 29 70 0 0 chr2 188487771 188487828 -62200026 + AT_rich Low_complexity Low_complexity 1 57 0 268 196 0 0 chr2 188488392 188488443 -62199411 - L2 LINE L2 0 3313 3263 24 67 0 0 chr2 188488571 188488616 -62199238 + AT_rich Low_complexity Low_complexity 1 45 0 695 179 0 8 chr2 188488627 188488750 -62199104 + AluJb SINE Alu 5 126 -186 2363 93 0 0 chr2 188488763 188489064 -62198790 - AluY SINE Alu -10 301 1 440 194 32 108 chr2 188489488 188489674 -62198180 + MER104 DNA MER2_type 5 176 -4 182 289 0 0 chr2 188489709 188489754 -62198100 + L2 LINE L2 3222 3266 -6 6415 175 119 32 chr2 188489884 188491425 -62196429 + MER52A LTR ERV1 1 1755 0 2240 116 0 3 chr2 188491865 188492168 -62195686 + AluSg SINE Alu 1 302 -8 2108 112 0 7 chr2 188494016 188494303 -62193551 + AluSx SINE Alu 1 285 -27 1802 155 0 17 chr2 188494518 188494814 -62193040 - AluJb SINE Alu -21 291 1 2106 93 0 58 chr2 188495073 188495386 -62192468 + AluSx SINE Alu 1 295 -17 244 268 56 0 chr2 188495895 188495966 -62191888 + MIR SINE MIR 74 148 -114 259 335 43 67 chr2 188496090 188496299 -62191555 + MIR SINE MIR 1 204 -58 1626 280 142 23 chr2 188496339 188497064 -62190790 + L2 LINE L2 1916 2726 -588 1151 295 66 10 chr2 188497064 188497474 -62190380 - LTR16A LTR ERVL 0 450 18 1256 262 62 76 chr2 188497485 188498058 -62189796 + L2 LINE L2 2716 3306 -7 220 253 0 25 chr2 188498417 188498496 -62189358 + (TTA)n Simple_repeat Simple_repeat 1 77 0 766 284 44 24 chr2 188498502 188498752 -62189102 - MIR SINE MIR -6 256 2 657 216 86 25 chr2 188498864 188499026 -62188828 - FAM SINE Alu 0 175 4 558 154 118 0 chr2 188499087 188499197 -62188657 - FLAM_C SINE Alu -18 125 3 758 101 0 0 chr2 188502388 188502497 -62185357 + HY1 scRNA scRNA 2 110 -2 859 169 0 0 chr2 188502730 188502854 -62185000 - FLAM_C SINE Alu -19 124 1 2977 136 29 29 chr2 188503380 188503731 -62184123 - L1MB8 LINE L1 0 6178 5825 1534 203 0 42 chr2 188503731 188504037 -62183817 - AluJo SINE Alu -15 297 5 2977 136 29 29 chr2 188504037 188504266 -62183588 - L1MB8 LINE L1 -352 5826 5598 2023 150 0 6 chr2 188504864 188505178 -62182676 - AluJo SINE Alu 0 312 1 189 139 0 0 chr2 188505258 188505301 -62182553 + (T)n Simple_repeat Simple_repeat 1 43 0 232 240 0 0 chr2 188506523 188506573 -62181281 + L2 LINE L2 3222 3271 -1 561 256 102 56 chr2 188506971 188507090 -62180764 + MIR SINE MIR 7 142 -120 2270 93 10 0 chr2 188507090 188507391 -62180463 - AluSx SINE Alu -8 304 1 561 256 102 56 chr2 188507391 188507486 -62180368 + MIR SINE MIR 142 231 -31 3468 123 17 13 chr2 188507690 188508212 -62179642 + MER1A DNA MER1_type 4 527 0 239 200 55 100 chr2 188509430 188509540 -62178314 - HAL1b LINE L1 -438 910 806 21 57 0 0 chr2 188509564 188509599 -62178255 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 188509722 188509744 -62178110 + AT_rich Low_complexity Low_complexity 1 22 0 311 375 21 14 chr2 188509979 188510123 -62177731 - HAL1 LINE L1 -585 1922 1778 276 284 64 64 chr2 188511064 188511205 -62176649 + L2 LINE L2 2933 3073 -199 2148 248 62 31 chr2 188511243 188512270 -62175584 - L2 LINE L2 0 3313 2249 591 263 263 18 chr2 188512281 188512551 -62175303 - L2 LINE L2 -1954 1360 1157 1901 103 33 43 chr2 188512551 188512852 -62175002 + AluSx SINE Alu 1 298 -14 591 263 263 18 chr2 188512852 188512961 -62174893 - L2 LINE L2 -2157 1157 888 2222 96 3 3 chr2 188513651 188513943 -62173911 - AluSx SINE Alu -5 307 16 423 279 163 7 chr2 188514321 188514468 -62173386 - MER5A DNA MER1_type -6 183 14 22 0 0 0 chr2 188515332 188515354 -62172500 + AT_rich Low_complexity Low_complexity 1 22 0 570 249 57 23 chr2 188516899 188517076 -62170778 + MIR SINE MIR 49 231 -31 311 355 53 42 chr2 188517223 188517412 -62170442 - MIR3 SINE MIR 0 208 18 1879 149 7 7 chr2 188517453 188517749 -62170105 - AluSx SINE Alu -16 296 1 1495 162 35 0 chr2 188518415 188518705 -62169149 - L1PA16 LINE L1 -22 6144 5845 23 0 0 0 chr2 188518820 188518843 -62169011 + AT_rich Low_complexity Low_complexity 1 23 0 1716 108 54 50 chr2 188518901 188519203 -62168651 - AluSc SINE Alu 0 303 1 190 336 154 20 chr2 188519968 188520117 -62167737 + MIR SINE MIR 10 178 -84 2222 122 3 0 chr2 188520287 188520590 -62167264 - AluSx SINE Alu -8 304 1 833 163 0 7 chr2 188520907 188521048 -62166806 + FRAM SINE Alu 4 143 -33 3277 167 84 5 chr2 188521471 188522129 -62165725 + MER50 LTR ERV1 2 711 -23 858 153 0 0 chr2 188523361 188523485 -62164369 + FLAM_C SINE Alu 1 124 -9 2289 94 0 7 chr2 188523516 188523813 -62164041 + AluSq SINE Alu 1 295 -18 1564 178 23 26 chr2 188524551 188524860 -62162994 + AluJo SINE Alu 2 309 -3 187 282 164 18 chr2 188524914 188525024 -62162830 + MIR SINE MIR 42 167 -95 23 0 0 0 chr2 188525055 188525078 -62162776 + AT_rich Low_complexity Low_complexity 1 23 0 1175 308 116 51 chr2 188525143 188525206 -62162648 + L2 LINE L2 1844 1901 -1413 2631 123 41 10 chr2 188525206 188525621 -62162233 + MSTA LTR MaLR 1 428 0 1175 308 116 51 chr2 188525621 188525822 -62162032 + L2 LINE L2 1901 2088 -1226 886 129 0 8 chr2 188525822 188525946 -62161908 + FLAM_C SINE Alu 2 124 -9 1175 308 116 51 chr2 188525946 188526527 -62161327 + L2 LINE L2 2088 2745 -569 947 149 16 5 chr2 188526533 188526725 -62161129 + AluJb SINE Alu 2 286 -26 463 331 69 34 chr2 188526749 188527154 -62160700 + L2 LINE L2 2771 3194 -78 4903 198 56 52 chr2 188527159 188528324 -62159530 - L1MD1 LINE L1 -1 6635 5476 2224 100 7 16 chr2 188528324 188528634 -62159220 - AluY SINE Alu -4 307 1 4903 198 56 52 chr2 188528634 188529285 -62158569 - L1MD1 LINE L1 -1160 5476 4829 2071 122 30 7 chr2 188529285 188529581 -62158273 - AluSq SINE Alu -10 303 1 4903 198 56 52 chr2 188529581 188529936 -62157918 - L1MD1 LINE L1 -1807 4829 4477 2352 97 0 3 chr2 188529936 188530245 -62157609 - AluSg SINE Alu -2 308 1 2190 105 0 0 chr2 188530246 188530531 -62157323 - AluSx SINE Alu -18 294 10 4903 198 56 52 chr2 188530531 188531011 -62156843 - L1MD1 LINE L1 -2158 4478 3967 1756 178 114 42 chr2 188531002 188531402 -62156452 - L1MD1 LINE L1 -4181 2359 1908 * 1764 158 16 32 chr2 188531402 188531718 -62156136 + AluJb SINE Alu 1 311 -1 1756 178 114 42 chr2 188531718 188531861 -62155993 - L1MD1 LINE L1 -4632 1908 1777 2343 98 3 3 chr2 188531871 188532178 -62155676 + AluSq SINE Alu 1 307 -6 2622 36 3 0 chr2 188532565 188532870 -62154984 - AluY SINE Alu -5 306 1 1475 93 43 90 chr2 188533081 188533299 -62154555 + Tigger2a DNA MER2_type 1 203 -2505 1834 180 0 13 chr2 188533299 188533615 -62154239 - AluJb SINE Alu 0 312 1 1475 93 43 90 chr2 188533615 188533696 -62154158 + Tigger2a DNA MER2_type 203 286 -148 626 236 0 8 chr2 188533711 188533834 -62154020 + FLAM_A SINE Alu 6 127 -15 284 236 0 42 chr2 188533834 188533906 -62153948 + Tigger2a DNA MER2_type 365 433 -1 7717 178 8 17 chr2 188534220 188535601 -62152253 + L1 LINE L1 24 1394 -6171 2076 119 64 25 chr2 188535601 188535962 -62151892 + THE1C LTR MaLR 1 375 0 7717 178 8 17 chr2 188535962 188536009 -62151845 + L1 LINE L1 1394 1440 -6125 5791 181 14 53 chr2 188536005 188537521 -62150333 + L1 LINE L1 3654 5109 -2456 * 2153 81 7 0 chr2 188537518 188537826 -62150028 + L1PA8 LINE L1 4046 4355 -1791 * 183 42 0 0 chr2 188537826 188537850 -62150004 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 6905 80 17 1 chr2 188537852 188539591 -62148263 + L1PA8 LINE L1 4408 6161 -11 236 170 19 0 chr2 188539598 188539651 -62148203 + L1 LINE L1 5092 5145 -2420 * 3182 94 12 18 chr2 188539648 188540161 -62147693 + L1MA3 LINE L1 5641 6150 -155 2113 105 20 10 chr2 188540355 188540650 -62147204 - AluSg SINE Alu -12 298 1 1981 131 28 0 chr2 188540744 188541034 -62146820 - AluSx SINE Alu -14 298 1 25 31 0 0 chr2 188541949 188541981 -62145873 + AT_rich Low_complexity Low_complexity 1 32 0 1980 125 7 14 chr2 188542557 188542845 -62145009 + AluSq SINE Alu 1 286 -27 2004 147 6 13 chr2 188543423 188543737 -62144117 + AluJb SINE Alu 1 312 0 2190 135 3 0 chr2 188544215 188544526 -62143328 + AluSq SINE Alu 1 312 -1 180 0 0 0 chr2 188545496 188545516 -62142338 + (CAAT)n Simple_repeat Simple_repeat 4 23 0 187 267 17 18 chr2 188547256 188547337 -62140517 + L2 LINE L2 2933 3015 -257 276 368 0 0 chr2 188547370 188547457 -62140397 + L2 LINE L2 3186 3272 0 2432 96 0 0 chr2 188547749 188548051 -62139803 + AluSg SINE Alu 1 302 -8 3254 74 7 9 chr2 188548061 188548509 -62139345 + L1PA10 LINE L1 5706 6152 -16 3424 147 36 16 chr2 188548860 188549473 -62138381 + MER51A LTR ERV1 1 625 -9 1739 146 4 0 chr2 188550679 188550926 -62136928 + AluSx SINE Alu 3 250 -62 228 233 0 0 chr2 188551624 188551667 -62136187 + LTR16A1 LTR ERVL 413 455 -2 26 0 0 0 chr2 188551702 188551728 -62136126 + AT_rich Low_complexity Low_complexity 1 26 0 2022 117 6 55 chr2 188552028 188552353 -62135501 + AluSx SINE Alu 1 309 -3 1704 141 141 0 chr2 188552404 188552709 -62135145 - MER7A DNA MER2_type 0 346 1 252 204 56 0 chr2 188552783 188552837 -62135017 + L2 LINE L2 3252 3308 -5 226 333 0 0 chr2 188552837 188552900 -62134954 + GA-rich Low_complexity Low_complexity 4 66 0 1732 141 0 54 chr2 188553928 188554226 -62133628 - AluJo SINE Alu -30 282 1 288 328 126 8 chr2 188554282 188554401 -62133453 + L2 LINE L2 3136 3268 -4 395 240 10 29 chr2 188554508 188554612 -62133242 - MER5B DNA MER1_type -1 177 76 854 126 0 0 chr2 188554770 188554897 -62132957 + AluSg/x SINE Alu 183 309 0 1733 311 125 44 chr2 188554902 188556306 -62131548 + L2 LINE L2 1454 2971 -343 204 300 59 71 chr2 188556577 188556747 -62131107 - L2 LINE L2 -222 3050 2883 457 269 92 28 chr2 188557114 188557363 -62130491 + L1ME4a LINE L1 5551 5815 -306 1021 190 60 37 chr2 188557387 188557603 -62130251 + AluJo SINE Alu 87 307 -5 213 108 0 0 chr2 188557603 188557640 -62130214 + (CAAGA)n Simple_repeat Simple_repeat 4 40 0 * 329 169 0 26 chr2 188557638 188557677 -62130177 + GA-rich Low_complexity Low_complexity 3 41 -36 186 43 0 0 chr2 188557677 188557700 -62130154 + (CGAA)n Simple_repeat Simple_repeat 2 24 0 329 169 0 26 chr2 188557700 188557737 -62130117 + GA-rich Low_complexity Low_complexity 41 77 0 352 195 249 62 chr2 188557753 188557783 -62130071 + L1ME4a LINE L1 5832 5855 -266 2395 110 0 0 chr2 188557783 188558093 -62129761 + AluSx SINE Alu 1 310 -2 352 195 249 62 chr2 188558093 188558303 -62129551 + L1ME4a LINE L1 5855 6117 -4 1650 177 7 7 chr2 188558960 188559268 -62128586 + AluJb SINE Alu 1 308 0 228 287 73 73 chr2 188560204 188560340 -62127514 - MIR SINE MIR -80 182 47 391 349 69 6 chr2 188560351 188560526 -62127328 + MIR SINE MIR 2 187 -75 1475 204 18 54 chr2 188562727 188563115 -62124739 + MLT1A2 LTR MaLR 1 374 0 1938 147 0 7 chr2 188563148 188563441 -62124413 + AluJb SINE Alu 1 291 -21 275 294 31 6 chr2 188563567 188563785 -62124069 + (GGGTG)n Simple_repeat Simple_repeat 1 223 0 1302 199 4 15 chr2 188563880 188564152 -62123702 - AluJb SINE Alu -43 269 1 405 169 0 14 chr2 188564152 188564223 -62123631 + Tigger5 DNA MER2_type 2254 2323 0 1431 163 68 34 chr2 188564241 188564535 -62123319 + MER7A DNA MER2_type 1 302 -44 252 357 80 0 chr2 188564647 188564756 -62123098 + MIR SINE MIR 33 150 -58 216 357 0 31 chr2 188564756 188564854 -62123000 + MER5B DNA MER1_type 1 95 -83 255 265 20 20 chr2 188565177 188565279 -62122575 + MIR SINE MIR 161 262 0 193 250 0 0 chr2 188565297 188565333 -62122521 + L2 LINE L2 3266 3301 -12 699 192 0 23 chr2 188566590 188566720 -62121134 + FLAM_A SINE Alu 1 127 -6 224 257 110 37 chr2 188566880 188566989 -62120865 + MIR SINE MIR 63 179 -83 1463 197 14 10 chr2 188567076 188567371 -62120483 - AluJb SINE Alu -10 302 7 2236 72 13 23 chr2 188567780 188568085 -62119769 - AluSq SINE Alu -11 302 1 569 240 34 34 chr2 188568185 188568360 -62119494 - MIR SINE MIR -13 249 75 27 29 0 0 chr2 188568515 188568549 -62119305 + AT_rich Low_complexity Low_complexity 1 34 0 726 164 0 37 chr2 188569206 188569340 -62118514 - FLAM_C SINE Alu 0 133 5 586 325 49 12 chr2 188569573 188569819 -62118035 - MIR SINE MIR -5 257 3 376 276 151 62 chr2 188571637 188571729 -62116125 - MIR SINE MIR -29 233 151 2164 119 0 3 chr2 188571729 188572040 -62115814 - AluSx SINE Alu -2 310 1 376 276 151 62 chr2 188572040 188572139 -62115715 - MIR SINE MIR -111 151 25 2173 111 63 0 chr2 188572537 188572869 -62114985 - L1PA15 LINE L1 -21 6144 5792 1075 155 24 0 chr2 188573179 188573347 -62114507 - MER2 DNA MER2_type -173 172 1 626 177 123 85 chr2 188573367 188573627 -62114227 - MER5C DNA MER1_type 0 324 55 266 183 0 14 chr2 188573690 188573761 -62114093 - HAL1b LINE L1 -531 817 748 958 210 23 0 chr2 188574242 188574418 -62113436 + MER5A DNA MER1_type 10 189 0 1939 148 3 7 chr2 188574815 188575120 -62112734 - AluSx SINE Alu -8 304 1 209 283 0 33 chr2 188575737 188575797 -62112057 + L2 LINE L2 3213 3270 -2 673 207 0 15 chr2 188576058 188576193 -62111661 + FLAM_C SINE Alu 1 133 0 199 114 45 0 chr2 188576356 188576400 -62111454 + (TA)n Simple_repeat Simple_repeat 1 46 0 1980 95 38 0 chr2 188576400 188576662 -62111192 - AluSg SINE Alu -24 286 15 814 162 47 7 chr2 188576682 188576830 -62111024 - AluSg/x SINE Alu -22 290 137 26 30 0 0 chr2 188576916 188576949 -62110905 + AT_rich Low_complexity Low_complexity 1 33 0 234 350 33 17 chr2 188578193 188578313 -62109541 - MER5A DNA MER1_type -7 182 61 493 282 37 58 chr2 188578323 188578513 -62109341 - L1ME3 LINE L1 -5 6161 5978 2253 106 0 3 chr2 188579133 188579436 -62108418 - AluSx SINE Alu -10 302 1 27 62 0 0 chr2 188579574 188579622 -62108232 + AT_rich Low_complexity Low_complexity 1 48 0 2090 108 10 3 chr2 188580577 188580874 -62106980 - AluSx SINE Alu -12 300 2 188 205 72 145 chr2 188581543 188581626 -62106228 - MIR SINE MIR -26 236 160 194 291 165 0 chr2 188581761 188581840 -62106014 - MIR SINE MIR -90 172 81 252 0 0 0 chr2 188581944 188581972 -62105882 + (CA)n Simple_repeat Simple_repeat 2 29 0 2026 126 10 3 chr2 188582350 188582643 -62105211 - AluSx SINE Alu -15 297 3 2076 184 55 8 chr2 188583613 188584010 -62103844 - MER47B DNA MER2_type -1 417 2 2196 125 0 0 chr2 188584465 188584769 -62103085 - AluSx SINE Alu -8 304 1 200 94 31 0 chr2 188584816 188584848 -62103006 + CT-rich Low_complexity Low_complexity 1 33 0 377 333 15 25 chr2 188585427 188585625 -62102229 - L2 LINE L2 -570 2744 2549 28 71 0 0 chr2 188585794 188585850 -62102004 + AT_rich Low_complexity Low_complexity 1 56 0 317 322 123 29 chr2 188586484 188586655 -62101199 - MIR SINE MIR -62 200 14 412 111 28 0 chr2 188586766 188586838 -62101016 - L1MB4 LINE L1 -2 6178 6105 932 268 49 78 chr2 188586988 188587463 -62100391 - L1ME1 LINE L1 -4 6162 5706 292 294 109 80 chr2 188587865 188588103 -62099751 - MIR SINE MIR -12 250 6 2771 148 33 26 chr2 188588517 188588888 -62098966 - L1MB2 LINE L1 -1 6170 5792 2063 133 0 3 chr2 188588888 188589189 -62098665 - AluSx SINE Alu -12 300 1 2771 148 33 26 chr2 188589189 188589357 -62098497 - L1MB2 LINE L1 -379 5792 5627 28 29 0 0 chr2 188589705 188589740 -62098114 + AT_rich Low_complexity Low_complexity 1 35 0 849 228 69 10 chr2 188589833 188590035 -62097819 - MER58A DNA MER1_type -2 222 9 24 32 0 0 chr2 188590454 188590485 -62097369 + AT_rich Low_complexity Low_complexity 1 31 0 1437 193 39 32 chr2 188590486 188590771 -62097083 - AluJo SINE Alu -25 287 1 28 48 0 0 chr2 188590781 188590823 -62097031 + AT_rich Low_complexity Low_complexity 1 42 0 2156 189 35 22 chr2 188591592 188592053 -62095801 - MLT1C LTR MaLR 0 467 1 198 0 0 0 chr2 188592114 188592136 -62095718 + (T)n Simple_repeat Simple_repeat 1 22 0 22 0 0 0 chr2 188593189 188593211 -62094643 + AT_rich Low_complexity Low_complexity 1 22 0 2555 157 40 8 chr2 188593211 188593707 -62094147 - L1MA4 LINE L1 -6 6294 5783 10486 158 61 42 chr2 188593847 188595155 -62092699 - L1MA4 LINE L1 -484 5816 4535 2791 3 0 0 chr2 188595155 188595459 -62092395 - AluYa5 SINE Alu -7 304 1 10486 158 61 42 chr2 188595459 188597045 -62090809 - L1MA4 LINE L1 -1765 4535 2851 1635 161 90 5 chr2 188597060 188597427 -62090427 - L1 LINE L1 -3075 3071 2674 1834 228 24 24 chr2 188597730 188598181 -62089673 - LTR40c LTR ERVL -14 451 1 219 333 192 25 chr2 188598255 188598531 -62089323 + L2 LINE L2 2568 2889 -425 2105 106 10 3 chr2 188599986 188600279 -62087575 + AluSx SINE Alu 1 295 -17 382 132 8 163 chr2 188601021 188601084 -62086770 + MER104 DNA Tc2 25 60 -1838 735 219 12 18 chr2 188601084 188601248 -62086606 + FRAM SINE Alu 1 163 -3 382 132 8 163 chr2 188601248 188601313 -62086541 + MER104 DNA Tc2 60 133 -47 888 114 0 30 chr2 188601332 188601463 -62086391 - AluJb SINE Alu -185 127 1 30 59 0 0 chr2 188601541 188601592 -62086262 + AT_rich Low_complexity Low_complexity 1 51 0 25 65 0 0 chr2 188602490 188602536 -62085318 + AT_rich Low_complexity Low_complexity 1 46 0 333 274 0 78 chr2 188602636 188602738 -62085116 - LTR16A LTR ERVL 0 450 357 311 241 157 0 chr2 188602993 188603076 -62084778 + L2 LINE L2 2596 2691 -623 279 240 50 70 chr2 188604710 188604815 -62083039 - L1MC5 LINE L1 -1003 7039 6933 209 33 33 0 chr2 188604815 188604845 -62083009 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 12973 36 6 0 chr2 188604845 188607173 -62080681 - L1PA4 LINE L1 -16 6139 3801 279 240 50 70 chr2 188607173 188607250 -62080604 - L1MC5 LINE L1 -1107 6935 6784 185 225 25 0 chr2 188607409 188607449 -62080405 + L2 LINE L2 2192 2232 -1082 1004 185 157 4 chr2 188607467 188607748 -62080106 - MER33 DNA MER1_type 0 324 1 213 340 104 0 chr2 188607878 188607984 -62079870 + L2 LINE L2 2438 2554 -760 1959 100 32 18 chr2 188608128 188608431 -62079423 + AluSq SINE Alu 1 307 0 22 0 0 0 chr2 188609903 188609925 -62077929 + AT_rich Low_complexity Low_complexity 1 22 0 319 272 124 87 chr2 188609954 188610333 -62077521 + L1M2 LINE L1 485 1231 -5618 1233 144 6 0 chr2 188810348 188810528 -61877326 - AluSg/x SINE Alu -45 267 87 1215 267 17 67 chr2 188810641 188810914 -61876940 - MER21-int LTR ERV1 -1322 2869 2627 2266 92 17 0 chr2 188810914 188811206 -61876648 - AluSp SINE Alu -16 297 1 1215 267 17 67 chr2 188811206 188811397 -61876457 - MER21-int LTR ERV1 -1564 2627 2428 2231 105 7 13 chr2 188811517 188811821 -61876033 + AluSq SINE Alu 1 302 -11 1039 144 35 12 chr2 188812478 188812651 -61875203 - AluSg/x SINE Alu 0 310 134 2165 128 3 0 chr2 188812653 188812957 -61874897 - AluSx SINE Alu -7 305 1 813 245 20 5 chr2 188813150 188813350 -61874504 - MER21-int LTR ERV1 -2316 1875 1673 1110 251 36 66 chr2 188813548 188813824 -61874030 - MER21-int LTR ERV1 -2308 4450 4167 2132 141 0 0 chr2 188813824 188814121 -61873733 - AluSx SINE Alu -15 297 1 1110 251 36 66 chr2 188814121 188814347 -61873507 - MER21-int LTR ERV1 -2591 4167 1219 2239 77 13 10 chr2 188814436 188814734 -61873120 + AluY SINE Alu 1 299 -12 1703 191 16 76 chr2 188814736 188814927 -61872927 + MER41B LTR ERV1 171 160 -326 7984 7 2 0 chr2 188814927 188816014 -61871840 + L1PA2 LINE L1 5067 6155 0 1703 191 16 76 chr2 188816014 188816315 -61871539 + MER41B LTR ERV1 159 476 -10 2220 282 42 22 chr2 188816329 188816976 -61870878 - MER21-int LTR ERV1 -3241 950 283 2205 113 0 17 chr2 188816976 188817278 -61870576 + AluSx SINE Alu 1 297 -15 2220 282 42 22 chr2 188817278 188817414 -61870440 - MER21-int LTR ERV1 -3908 283 151 473 323 19 6 chr2 188817414 188817575 -61870279 - MIR SINE MIR -99 163 1 1570 166 28 14 chr2 188817614 188817904 -61869950 + AluJo SINE Alu 15 308 -4 300 167 0 0 chr2 188818125 188818173 -61869681 - MER5B DNA MER1_type 0 178 131 872 205 47 0 chr2 188818173 188818344 -61869510 + AluJb SINE Alu 120 298 -14 657 230 111 65 chr2 188818415 188818762 -61869092 + MLT1C LTR MaLR 23 391 -76 1691 187 10 23 chr2 188818903 188819208 -61868646 - AluJb SINE Alu -11 301 1 2013 115 14 4 chr2 188819220 188819532 -61868322 - AluSx SINE Alu 0 315 1 350 156 0 31 chr2 188819534 188819598 -61868256 + MER5B DNA MER1_type 117 178 0 22 56 0 0 chr2 188819683 188819719 -61868135 + AT_rich Low_complexity Low_complexity 1 36 0 550 250 0 0 chr2 188819719 188819831 -61868023 - FLAM_A SINE Alu -30 112 1 1113 214 67 18 chr2 188820524 188820866 -61866988 + L1MB7 LINE L1 5825 6183 -1 1974 109 10 0 chr2 188820911 188821213 -61866641 + MER57B LTR ERV1 130 434 0 288 296 23 0 chr2 188821712 188821800 -61866054 + LTR67 LTR ERVL 388 477 -80 1791 147 7 27 chr2 188821814 188822114 -61865740 - AluJb SINE Alu -18 294 1 206 216 320 31 chr2 188822134 188822231 -61865623 - MER5A DNA MER1_type -3 186 62 2007 117 4 0 chr2 188822232 188822497 -61865357 - AluSx SINE Alu -9 303 38 2194 111 7 3 chr2 188822709 188823006 -61864848 + AluSq SINE Alu 1 298 -15 517 121 24 0 chr2 188823193 188823276 -61864578 - AluS SINE Alu -227 85 1 1889 143 3 3 chr2 188823368 188823654 -61864200 + AluSx SINE Alu 1 286 -26 2011 279 49 16 chr2 188823674 188824344 -61863510 - MER115 DNA AcHobo 0 693 2 34 0 0 0 chr2 188824492 188824526 -61863328 + AT_rich Low_complexity Low_complexity 1 34 0 2064 121 17 0 chr2 188824526 188824816 -61863038 - AluSx SINE Alu -17 295 1 1016 214 27 96 chr2 188824842 188825174 -61862680 - MER21-int LTR ERV1 -1560 2631 2323 2215 127 0 0 chr2 188825762 188826062 -61861792 - AluSx SINE Alu -12 300 1 1887 165 0 0 chr2 188826233 188826518 -61861336 - AluJb SINE Alu -11 301 17 326 243 0 0 chr2 188826518 188826592 -61861262 - MIR SINE MIR -108 154 81 553 264 120 45 chr2 188826611 188826853 -61861001 + MLT1J LTR MaLR 7 266 -245 368 328 113 0 chr2 188826917 188827103 -61860751 + MIR SINE MIR 1 207 -55 285 290 32 11 chr2 188827595 188827688 -61860166 - MIR3 SINE MIR -25 183 89 571 172 50 129 chr2 188827754 188828033 -61859821 - L1MD2 LINE L1 0 6359 6103 28 61 0 0 chr2 188828824 188828873 -61858981 + AT_rich Low_complexity Low_complexity 1 49 0 2214 107 0 0 chr2 188829019 188829336 -61858518 + AluSx SINE Alu 1 317 0 21 57 0 0 chr2 188829559 188829594 -61858260 + AT_rich Low_complexity Low_complexity 1 35 0 408 357 18 12 chr2 188829726 188829894 -61857960 - L2 LINE L2 -1 3271 3103 335 281 22 0 chr2 188831534 188831623 -61856231 + L2 LINE L2 3223 3313 0 25 31 0 0 chr2 188831983 188832015 -61855839 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr2 188832481 188832504 -61855350 + AT_rich Low_complexity Low_complexity 1 23 0 300 288 103 27 chr2 188832995 188833179 -61854675 + L1ME LINE L1 5623 5820 -301 23 101 0 0 chr2 188833819 188833898 -61853956 + AT_rich Low_complexity Low_complexity 1 79 0 22 0 0 0 chr2 188833992 188834014 -61853840 + AT_rich Low_complexity Low_complexity 1 22 0 286 268 203 16 chr2 188834449 188834572 -61853282 - MIR SINE MIR -116 146 1 21 57 0 0 chr2 188835056 188835091 -61852763 + AT_rich Low_complexity Low_complexity 1 35 0 1790 162 28 15 chr2 188835920 188836247 -61851607 - MER39B LTR ERV1 0 653 323 24 0 0 0 chr2 188836683 188836707 -61851147 + AT_rich Low_complexity Low_complexity 1 24 0 2323 62 69 0 chr2 188836755 188837046 -61850808 - AluY SINE Alu 0 311 1 192 327 0 0 chr2 188837223 188837275 -61850579 + MIR SINE MIR 91 142 -120 330 330 68 59 chr2 188837629 188837966 -61849888 + L1MEc LINE L1 1858 2200 -4196 4639 124 71 11 chr2 188837966 188838799 -61849055 + L1MA4 LINE L1 5412 6294 -6 330 330 68 59 chr2 188838799 188838816 -61849038 + L1MEc LINE L1 2200 2215 -4181 772 149 40 20 chr2 188839719 188839901 -61847953 + L1PA16 LINE L1 6004 6188 0 196 296 112 32 chr2 188840276 188840401 -61847453 - MIR SINE MIR -109 153 19 1608 112 21 0 chr2 188841444 188841717 -61846137 - AluSp SINE Alu 0 324 47 211 137 20 59 chr2 188841847 188841898 -61845956 - L2 LINE L2 -1 3312 3264 25 31 0 0 chr2 188842447 188842479 -61845375 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr2 188842572 188842596 -61845258 + AT_rich Low_complexity Low_complexity 1 24 0 1231 141 13 43 chr2 188842991 188843225 -61844629 + LTR9B LTR ERV1 290 516 -128 2209 123 0 0 chr2 188843464 188843764 -61844090 - AluSx SINE Alu -12 300 1 219 69 0 0 chr2 188844306 188844335 -61843519 + (TA)n Simple_repeat Simple_repeat 2 30 0 460 278 136 24 chr2 188844729 188844847 -61843007 + MER5A DNA MER1_type 1 145 -44 191 36 36 0 chr2 188844847 188844875 -61842979 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 460 278 136 24 chr2 188844875 188844925 -61842929 + MER5A DNA MER1_type 145 188 -1 2273 93 0 19 chr2 188845142 188845455 -61842399 - AluY SINE Alu -4 307 1 6474 18 0 1 chr2 188845496 188846274 -61841580 - L1PA2 LINE L1 0 6155 5379 1514 188 0 22 chr2 188846627 188846899 -61840955 + AluJo SINE Alu 3 268 -44 21 0 0 0 chr2 188846899 188846920 -61840934 + AT_rich Low_complexity Low_complexity 1 21 0 328 257 119 0 chr2 188846935 188847036 -61840818 + MIR SINE MIR 123 235 -27 1438 113 0 0 chr2 188847152 188847346 -61840508 - AluSg/x SINE Alu -9 301 108 286 279 58 7 chr2 188847449 188847603 -61840251 - LTR37A LTR ERV1 -124 302 141 184 387 16 0 chr2 188847782 188847844 -61840010 - MIR SINE MIR -150 112 50 * 395 308 116 43 chr2 188847837 188847922 -61839932 + L2 LINE L2 1710 1787 -1527 2111 147 13 31 chr2 188847922 188848304 -61839550 - THE1C LTR MaLR 0 375 1 395 308 116 43 chr2 188848304 188848640 -61839214 + L2 LINE L2 1787 2162 -1152 186 275 0 0 chr2 188848763 188848803 -61839051 - L2 LINE L2 -5 3308 3269 2195 148 50 2 chr2 188848998 188849397 -61838457 - MSTA LTR MaLR -10 418 1 302 318 157 34 chr2 188849501 188849737 -61838117 + L2 LINE L2 2842 3106 -166 1204 115 0 0 chr2 188849804 188849969 -61837885 + AluSq SINE Alu 149 313 0 270 0 0 0 chr2 188850003 188850033 -61837821 + (CA)n Simple_repeat Simple_repeat 2 31 0 320 355 58 13 chr2 188850599 188850754 -61837100 + L2 LINE L2 3107 3268 -4 23 0 0 0 chr2 188850830 188850853 -61837001 + AT_rich Low_complexity Low_complexity 1 23 0 1523 199 18 6 chr2 188851524 188851860 -61835994 + L1MB3 LINE L1 5830 6169 -14 499 204 0 9 chr2 188851899 188852007 -61835847 + MER57A LTR ERV1 295 401 -2 2629 199 12 4 chr2 188852009 188852526 -61835328 + MER57A-int LTR ERV1 1 521 -7016 1300 164 7 69 chr2 188852579 188852884 -61834970 + MER57A-int LTR ERV1 541 826 -6711 365 250 62 35 chr2 188852953 188853045 -61834809 + MER57A-int LTR ERV1 841 940 -4183 2601 123 57 0 chr2 188853045 188853450 -61834404 - MSTA LTR MaLR 0 428 1 365 250 62 35 chr2 188853450 188853501 -61834353 + MER57A-int LTR ERV1 940 988 -4135 352 131 16 0 chr2 188853501 188853562 -61834292 + MER34C LTR ERV1 155 216 -369 355 227 19 114 chr2 188853670 188853935 -61833919 + MER57A-int LTR ERV1 1096 1177 -3694 351 253 0 0 chr2 188854044 188854135 -61833719 + MER57A-int LTR ERV1 3248 3338 -2993 450 230 0 0 chr2 188854194 188854294 -61833560 + MER57A-int LTR ERV1 3354 3453 -2878 758 205 54 46 chr2 188854406 188854926 -61832928 + MER57A-int LTR ERV1 1698 3590 -2673 7199 159 17 40 chr2 188854963 188856543 -61831311 + MER57A-int LTR ERV1 4278 5821 -1716 6969 171 16 7 chr2 188856872 188858183 -61829671 + MER57A-int LTR ERV1 5825 7147 -390 736 131 59 26 chr2 188858183 188858336 -61829518 + LTR54B LTR ERV1 3 160 -338 1135 181 9 9 chr2 188858336 188858562 -61829292 + MER57A-int LTR ERV1 7307 7532 -5 921 164 0 0 chr2 188858565 188858717 -61829137 + MER57A LTR ERV1 1 152 -251 23 92 0 0 chr2 188858732 188858797 -61829057 + AT_rich Low_complexity Low_complexity 1 65 0 257 255 82 31 chr2 188859702 188859800 -61828054 + MIR SINE MIR 92 194 -68 23 0 0 0 chr2 188860363 188860386 -61827468 + AT_rich Low_complexity Low_complexity 1 23 0 297 260 125 24 chr2 188860616 188860824 -61827030 - L1MC5 LINE L1 -281 7680 7452 2292 63 21 0 chr2 188861104 188861391 -61826463 + AluY SINE Alu 1 293 -18 1575 199 44 0 chr2 188861480 188861776 -61826078 - AluJb SINE Alu -3 309 1 4930 174 15 27 chr2 188861780 188863685 -61824169 - L1MA4A LINE L1 -3 7002 5031 2151 124 0 0 chr2 188863685 188863990 -61823864 + AluSx SINE Alu 1 305 0 4930 174 15 27 chr2 188863990 188864368 -61823486 - L1MA4A LINE L1 -1974 5031 4650 2194 126 47 16 chr2 188864370 188864734 -61823120 - THE1C LTR MaLR 0 375 1 7535 100 23 192 chr2 188864735 188866627 -61821227 - THE1C-int LTR MaLR -6 1574 4 1520 177 54 46 chr2 188866630 188867002 -61820852 - THE1C LTR MaLR 0 375 1 8553 229 65 56 chr2 188867004 188867554 -61820300 - L1MA4A LINE L1 -3192 3656 3113 294 29 0 0 chr2 188867554 188867589 -61820265 + (CA)n Simple_repeat Simple_repeat 2 36 0 8553 229 65 56 chr2 188867589 188868877 -61818977 - L1MA4A LINE L1 -3735 3113 1839 1936 121 0 4 chr2 188868877 188869142 -61818712 - AluSc SINE Alu -7 302 39 8553 229 65 56 chr2 188869142 188869278 -61818576 - L1MA4A LINE L1 -5009 1839 1706 2205 134 0 3 chr2 188869278 188869585 -61818269 - AluSg SINE Alu -4 306 1 8553 229 65 56 chr2 188869585 188871024 -61816830 - L1MA4A LINE L1 -5142 1706 199 1509 169 103 26 chr2 188871024 188871372 -61816482 + THE1C LTR MaLR 1 375 0 8553 229 65 56 chr2 188871372 188871534 -61816320 - L1MA4A LINE L1 -6649 199 40 2553 222 48 56 chr2 188871839 188872370 -61815484 + L1ME2 LINE L1 4954 5488 -676 1582 202 31 0 chr2 188872370 188872662 -61815192 - AluJo SINE Alu -11 301 1 2553 222 48 56 chr2 188872662 188873332 -61814522 + L1ME2 LINE L1 5488 6155 -9 24 53 0 0 chr2 188874467 188874505 -61813349 + AT_rich Low_complexity Low_complexity 1 38 0 213 39 0 0 chr2 188874747 188874773 -61813081 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 24 53 0 0 chr2 188875370 188875408 -61812446 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr2 188876290 188876316 -61811538 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr2 188876526 188876550 -61811304 + AT_rich Low_complexity Low_complexity 1 24 0 2002 116 84 32 chr2 188876728 188877072 -61810782 - THE1B LTR MaLR 0 364 3 754 285 85 26 chr2 188877798 188878068 -61809786 - MLT1K LTR MaLR -164 424 139 22 56 0 0 chr2 188878159 188878195 -61809659 + AT_rich Low_complexity Low_complexity 1 36 0 2326 200 13 11 chr2 188878321 188878787 -61809067 + MLT1C LTR MaLR 1 467 0 2021 137 7 0 chr2 188879039 188879332 -61808522 + AluSc SINE Alu 1 295 -14 1395 207 24 58 chr2 188879427 188879803 -61808051 - MLT1A1 LTR MaLR 0 365 3 414 266 30 40 chr2 188880333 188880532 -61807322 - L2 LINE L2 -438 2876 2680 234 320 96 0 chr2 188881409 188881534 -61806320 - MIR SINE MIR -54 208 72 366 188 0 94 chr2 188881857 188881942 -61805912 - MIR3 SINE MIR -11 197 121 812 165 0 0 chr2 188882935 188883062 -61804792 - FRAM SINE Alu -19 157 31 1289 129 154 43 chr2 188883287 188883612 -61804242 + MER31B LTR ERV1 1 361 -105 431 181 52 9 chr2 188883612 188883728 -61804126 + MER65A LTR ERV1 1 121 -324 474 59 12 24 chr2 188884189 188884274 -61803580 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 1775 198 51 5 chr2 188884347 188884742 -61803112 - MLT2C2 LTR ERVL -46 418 6 21 0 0 0 chr2 188885395 188885416 -61802438 + AT_rich Low_complexity Low_complexity 1 21 0 2084 99 0 7 chr2 188885972 188886293 -61801561 - AluSg SINE Alu 0 319 1 1574 187 33 0 chr2 188886296 188886597 -61801257 - AluJb SINE Alu 0 311 2 593 322 51 23 chr2 188886603 188887172 -61800682 - L1ME3A LINE L1 -287 5883 5299 728 298 170 31 chr2 188887192 188887864 -61799990 - L1ME3A LINE L1 -864 5282 4518 1039 311 86 13 chr2 188887879 188888622 -61799232 - L1ME3A LINE L1 -1701 4445 3648 474 222 151 49 chr2 188888629 188888814 -61799040 - MIR SINE MIR 0 262 59 681 314 196 24 chr2 188888822 188889603 -61798251 - L1ME3A LINE L1 -2538 3608 2694 516 329 39 53 chr2 188889598 188889935 -61797919 + L1ME1 LINE L1 18 349 -6191 * 200 297 0 0 chr2 188890253 188890317 -61797537 + GA-rich Low_complexity Low_complexity 1 64 0 187 53 26 26 chr2 188892652 188892690 -61795164 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 995 256 56 67 chr2 188892848 188893615 -61794239 + L1ME1 LINE L1 929 1670 -4870 376 304 54 16 chr2 188893620 188893804 -61794050 + L1ME1 LINE L1 2017 2207 -4333 939 222 111 14 chr2 188893809 188894160 -61793694 + L1ME1 LINE L1 2962 3346 -3194 * 970 229 92 38 chr2 188894140 188894642 -61793212 + L1ME1 LINE L1 3654 4182 -2358 1436 245 49 38 chr2 188894664 188895170 -61792684 + L1ME1 LINE L1 5830 6338 -222 23 0 0 0 chr2 188895222 188895245 -61792609 + AT_rich Low_complexity Low_complexity 1 23 0 503 323 85 12 chr2 188895330 188895649 -61792205 - L1M4 LINE L1 -3594 2552 2211 1679 196 4 4 chr2 188895665 188895940 -61791914 - AluJb SINE Alu -37 275 1 24 67 0 0 chr2 188898053 188898098 -61789756 + AT_rich Low_complexity Low_complexity 1 45 0 338 61 20 0 chr2 188898248 188898297 -61789557 + (CA)n Simple_repeat Simple_repeat 2 51 0 50 59 0 0 chr2 188898969 188899054 -61788800 + AT_rich Low_complexity Low_complexity 1 85 0 212 161 16 0 chr2 188899442 188899504 -61788350 + (TA)n Simple_repeat Simple_repeat 2 64 0 426 328 30 25 chr2 188901396 188901594 -61786260 + MIR SINE MIR 20 218 -44 2058 123 20 0 chr2 188901955 188902247 -61785607 - AluSp SINE Alu -15 298 1 11302 105 8 9 chr2 188902488 188904281 -61783573 - L1P LINE L1 -3032 3114 1323 5703 87 11 8 chr2 188904273 188904740 -61783114 + L1PA7 LINE L1 2922 3386 -2768 * 2387 85 0 22 chr2 188904740 188905058 -61782796 + AluY SINE Alu 1 311 0 5703 87 11 8 chr2 188905058 188907733 -61780121 + L1PA7 LINE L1 3386 6146 -8 2159 113 3 0 chr2 188909658 188909958 -61777896 + AluSx SINE Alu 1 301 -11 2257 100 17 3 chr2 188915333 188915632 -61772222 - AluSq SINE Alu -9 304 2 205 264 155 23 chr2 188916158 188916287 -61771567 + L2 LINE L2 3081 3226 -87 540 273 26 0 chr2 188916366 188916520 -61771334 - MER58B DNA MER1_type -3 338 181 2066 86 0 0 chr2 188916549 188916805 -61771049 + AluY SINE Alu 1 256 -55 189 0 0 0 chr2 188916856 188916877 -61770977 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2071 154 0 0 chr2 188917746 188918057 -61769797 + AluSx SINE Alu 1 311 -1 269 227 47 120 chr2 188918472 188918622 -61769232 + MLT1E LTR MaLR 5 143 -450 286 226 0 0 chr2 188918673 188918726 -61769128 + FLAM SINE Alu 72 124 -9 2378 93 3 3 chr2 188918736 188919048 -61768806 + AluSx SINE Alu 1 312 0 2203 89 3 24 chr2 188919210 188919503 -61768351 + AluSc SINE Alu 1 287 -22 316 241 26 0 chr2 188919507 188919623 -61768231 + L1ME3 LINE L1 5194 5312 -834 739 187 0 8 chr2 188919659 188919782 -61768072 - FLAM_C SINE Alu -20 123 2 506 270 116 52 chr2 188919782 188920223 -61767631 + L1ME3 LINE L1 5303 5771 -391 307 256 12 12 chr2 188920359 188920445 -61767409 + L1ME3 LINE L1 6057 6142 -20 1129 95 7 0 chr2 188920486 188920634 -61767220 + AluSp SINE Alu 1 149 -164 2273 223 30 4 chr2 188920895 188921367 -61766487 + LTR42 LTR ERVL 1 484 -11 922 205 125 50 chr2 188921453 188921756 -61766098 - MLT1A1 LTR MaLR -7 358 33 2092 124 7 3 chr2 188921958 188922256 -61765598 + AluSx SINE Alu 1 299 -13 1989 136 0 4 chr2 188922440 188922720 -61765134 - AluSx SINE Alu -31 281 3 1625 109 0 0 chr2 188922749 188922960 -61764894 - AluSg/x SINE Alu -32 280 70 1797 185 80 51 chr2 188924431 188924476 -61763378 - MER65C LTR ERV1 0 461 419 1877 174 3 0 chr2 188924476 188924781 -61763073 - AluJo SINE Alu -1 311 6 1797 185 80 51 chr2 188924781 188924894 -61762960 - MER65C LTR ERV1 -42 419 311 1493 183 66 17 chr2 188924894 188925183 -61762671 + AluJb SINE Alu 1 303 -9 1797 185 80 51 chr2 188925183 188925471 -61762383 - MER65C LTR ERV1 -150 311 1 2020 134 7 3 chr2 188926130 188926437 -61761417 - AluSp SINE Alu -5 308 1 361 227 81 30 chr2 188926548 188926604 -61761250 - MIR SINE MIR -61 147 95 1834 170 6 6 chr2 188926604 188926915 -61760939 - AluJb SINE Alu -1 311 1 361 227 81 30 chr2 188926915 188927024 -61760830 - MIR SINE MIR -113 95 34 1911 167 13 0 chr2 188928520 188928826 -61759028 + AluSx SINE Alu 1 310 -2 1379 183 3 61 chr2 188929023 188929335 -61758519 - AluJo SINE Alu -7 305 12 231 178 0 0 chr2 188929547 188929592 -61758262 + L1ME LINE L1 5726 5770 -392 994 161 57 16 chr2 188929825 188930017 -61757837 + AluSx SINE Alu 1 200 -112 539 73 0 0 chr2 188930017 188930085 -61757769 + AluSc SINE Alu 66 133 -176 933 98 0 0 chr2 188930085 188930207 -61757647 + AluY SINE Alu 1 122 -189 4998 117 20 116 chr2 188930208 188931664 -61756190 - pTR5 LTR ERV1 0 2606 1524 1273 95 37 5 chr2 188931664 188931853 -61756001 + AluY SINE Alu 91 285 -26 1358 26 7 0 chr2 188931853 188932031 -61755823 + L1PA3 LINE L1 5993 6171 0 1386 89 0 0 chr2 188932031 188932211 -61755643 + AluY SINE Alu 132 311 0 635 151 0 0 chr2 188932211 188932304 -61755550 + AluSq SINE Alu 134 226 -87 234 0 0 0 chr2 188932307 188932333 -61755521 + (A)n Simple_repeat Simple_repeat 1 26 0 1493 208 61 0 chr2 188932478 188932641 -61755213 - AluJb SINE Alu -16 296 108 351 0 0 0 chr2 188932641 188932680 -61755174 + (TTG)n Simple_repeat Simple_repeat 1 39 0 1493 208 61 0 chr2 188932680 188932795 -61755059 - AluJb SINE Alu -204 108 1 198 368 0 13 chr2 188932917 188932993 -61754861 - L2 LINE L2 -2 3270 3196 1859 151 0 27 chr2 188933283 188933575 -61754279 + AluSx SINE Alu 5 288 -24 282 231 0 0 chr2 188933634 188933686 -61754168 + AluJ/monomer SINE Alu 1 52 -249 1436 107 0 0 chr2 188933686 188933882 -61753972 + AluSg/x SINE Alu 109 304 -6 1547 178 38 20 chr2 188933993 188934286 -61753568 + AluJb SINE Alu 1 298 -14 441 0 0 0 chr2 188934441 188934490 -61753364 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1837 125 11 0 chr2 188934502 188934766 -61753088 - AluSg SINE Alu -43 267 1 621 188 87 29 chr2 188934768 188934906 -61752948 - AluJb SINE Alu -17 295 150 204 162 27 0 chr2 188935044 188935081 -61752773 + CT-rich Low_complexity Low_complexity 2 39 0 1811 134 3 14 chr2 188935172 188935464 -61752390 + AluSp SINE Alu 25 313 0 1280 187 33 27 chr2 188935570 188935870 -61751984 + L1MB8 LINE L1 5877 6178 0 521 325 63 24 chr2 188936863 188937118 -61750736 + ERVL LTR ERVL 3938 4202 -1562 261 114 0 0 chr2 188937802 188937837 -61750017 - Charlie3 DNA MER1_type 0 2712 2678 2265 194 65 2 chr2 188939593 188939994 -61747860 + MSTB LTR MaLR 1 426 0 23 54 0 0 chr2 188940057 188940094 -61747760 + AT_rich Low_complexity Low_complexity 1 37 0 1976 112 84 0 chr2 188940146 188940433 -61747421 - AluSx SINE Alu -1 311 1 209 139 23 0 chr2 188940674 188940717 -61747137 + (TG)n Simple_repeat Simple_repeat 2 45 0 21 71 0 0 chr2 188940802 188940844 -61747010 + AT_rich Low_complexity Low_complexity 1 42 0 2530 62 0 0 chr2 188940844 188941148 -61746706 - AluY SINE Alu -7 304 1 2064 130 10 3 chr2 188941999 188942292 -61745562 - AluSx SINE Alu -17 295 1 821 317 86 39 chr2 188942295 188942784 -61745070 - L2 LINE L2 -1189 2125 1614 268 260 178 27 chr2 188942928 188943074 -61744780 - L2 LINE L2 -30 3283 3116 2089 104 4 0 chr2 188943981 188944296 -61743558 - AluSg SINE Alu 0 317 2 299 302 43 56 chr2 188945364 188945596 -61742258 + L2 LINE L2 2811 3039 -233 242 88 35 88 chr2 188945681 188945738 -61742116 - L1MCa LINE L1 -5256 1170 1117 882 250 130 0 chr2 188946029 188946237 -61741617 - MIR SINE MIR 0 262 28 2185 122 0 28 chr2 188946526 188946847 -61741007 + AluJb SINE Alu 1 312 0 23 0 0 0 chr2 188947699 188947722 -61740132 + AT_rich Low_complexity Low_complexity 1 23 0 211 370 129 26 chr2 188948235 188948546 -61739308 + L2 LINE L2 2401 2743 -571 204 125 0 0 chr2 188949631 188949663 -61738191 + (TA)n Simple_repeat Simple_repeat 1 32 0 181 257 105 95 chr2 188949957 188950062 -61737792 - L2 LINE L2 0 3313 3208 21 36 0 0 chr2 188951176 188951204 -61736650 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr2 188951770 188951809 -61736045 + AT_rich Low_complexity Low_complexity 1 39 0 1682 160 181 11 chr2 188951917 188952292 -61735562 + L1PB3 LINE L1 5716 6154 0 312 320 49 0 chr2 188954106 188954228 -61733626 - MIR SINE MIR -16 246 119 38632 85 9 16 chr2 188954241 188960432 -61727422 + L1PA6 LINE L1 11 6153 -1 2073 113 0 7 chr2 188960450 188960767 -61727087 + AluSg SINE Alu 1 315 0 231 337 47 12 chr2 188960781 188960867 -61726987 - MIR SINE MIR -158 104 16 322 307 133 101 chr2 188961193 188961509 -61726345 - L2 LINE L2 -4 3268 2943 1589 167 7 31 chr2 188961643 188961689 -61726165 - AluSx SINE Alu -25 287 241 1996 208 58 80 chr2 188961689 188962315 -61725539 + LTR9 LTR ERV1 1 612 0 1589 167 7 31 chr2 188962315 188962561 -61725293 - AluSx SINE Alu -71 241 2 298 356 137 15 chr2 188962602 188962931 -61724923 - L2 LINE L2 -580 2734 2366 727 226 73 0 chr2 188963337 188963501 -61724353 - MER5B DNA MER1_type -2 176 1 24 91 0 0 chr2 188963850 188963916 -61723938 + AT_rich Low_complexity Low_complexity 1 66 0 27 81 0 0 chr2 188965694 188965756 -61722098 + AT_rich Low_complexity Low_complexity 1 62 0 382 207 156 22 chr2 188966406 188966541 -61721313 + MIR SINE MIR 110 262 0 409 269 91 0 chr2 188967298 188967464 -61720390 + MIR SINE MIR 30 214 -48 189 0 0 0 chr2 188967872 188967893 -61719961 + (CA)n Simple_repeat Simple_repeat 2 22 0 209 227 0 27 chr2 188968406 188968481 -61719373 + GA-rich Low_complexity Low_complexity 3 75 0 192 217 0 0 chr2 188969879 188969925 -61717929 + GA-rich Low_complexity Low_complexity 4 49 0 243 279 39 8 chr2 188970665 188970794 -61717060 + L1ME LINE L1 5762 5894 -227 221 354 0 0 chr2 188970802 188970884 -61716970 + (TATATG)n Simple_repeat Simple_repeat 5 86 0 788 317 27 9 chr2 188972295 188972626 -61715228 - MER102b DNA MER1_type -3 338 2 1025 314 28 43 chr2 188973371 188973769 -61714085 + L1MA8 LINE L1 3 394 -5497 9996 198 92 66 chr2 188973888 188976183 -61711671 + L1MA8 LINE L1 295 2529 -3586 509 0 16 0 chr2 188976183 188976244 -61711610 + (TCTA)n Simple_repeat Simple_repeat 2 63 0 9996 198 92 66 chr2 188976244 188977076 -61710778 + L1MA8 LINE L1 2529 3338 -2777 2065 120 28 0 chr2 188977076 188977367 -61710487 + AluSq SINE Alu 3 301 -12 9996 198 92 66 chr2 188977367 188980032 -61707822 + L1MA8 LINE L1 3338 5933 -182 2290 93 0 3 chr2 188980032 188980333 -61707521 - AluY SINE Alu -11 300 1 7965 124 45 0 chr2 188980335 188981579 -61706275 + HSMAR2 DNA Mariner 2 1301 -1 9996 198 92 66 chr2 188981579 188981751 -61706103 + L1MA8 LINE L1 5933 6110 -5 1916 140 31 17 chr2 188981763 188982114 -61705740 + L1MB1 LINE L1 5773 6128 -40 2459 63 0 0 chr2 188982201 188982500 -61705354 + AluY SINE Alu 1 299 -12 662 318 59 9 chr2 188983135 188983355 -61704499 + MIR SINE MIR 20 250 -12 197 260 55 55 chr2 188983766 188983839 -61704015 + MIR SINE MIR 59 131 -131 22 88 0 0 chr2 188984385 188984442 -61703412 + AT_rich Low_complexity Low_complexity 1 57 0 276 237 105 26 chr2 188985252 188985366 -61702488 - MLT1L LTR MaLR -4 611 489 242 159 0 23 chr2 188985660 188985704 -61702150 - MLT1L LTR MaLR -427 188 146 2230 87 3 0 chr2 188985705 188986005 -61701849 - AluSc SINE Alu -4 305 5 396 149 25 41 chr2 188986085 188986206 -61701648 + GA-rich Low_complexity Low_complexity 3 121 0 1595 204 14 17 chr2 188986209 188986553 -61701301 + L1ME1 LINE L1 5822 6164 -2 274 268 37 79 chr2 188988724 188988948 -61698906 + MLT1J LTR MaLR 137 345 -105 850 314 57 58 chr2 188989014 188989060 -61698794 + MLT1K LTR MaLR 94 139 -449 1338 188 5 117 chr2 188989060 188989469 -61698385 + MLT1A1 LTR MaLR 3 365 0 850 314 57 58 chr2 188989469 188989918 -61697936 + MLT1K LTR MaLR 139 588 0 31 0 0 0 chr2 188990197 188990228 -61697626 + AT_rich Low_complexity Low_complexity 1 31 0 296 245 82 41 chr2 188990490 188990588 -61697266 - L2 LINE L2 -4 3309 3208 1018 204 105 38 chr2 188990979 188991322 -61696532 - Charlie2 DNA MER1_type -640 2222 1857 556 296 74 30 chr2 188991331 188991628 -61696226 - Charlie2 DNA MER1_type -2552 310 1 460 330 96 62 chr2 188991677 188991965 -61695889 + L2 LINE L2 1732 2009 -1305 2218 97 3 16 chr2 188991965 188992275 -61695579 - AluSc SINE Alu 0 309 4 460 330 96 62 chr2 188992275 188992629 -61695225 + L2 LINE L2 2009 2396 -918 240 342 45 18 chr2 188992776 188992887 -61694967 - L2 LINE L2 -4 3309 3196 198 236 0 0 chr2 188992904 188992959 -61694895 + (TA)n Simple_repeat Simple_repeat 2 56 0 645 174 8 8 chr2 188994014 188994135 -61693719 - L1PA15 LINE L1 -15 6150 6030 526 217 17 0 chr2 188994135 188994250 -61693604 - HAL1 LINE L1 -916 1591 1475 462 195 16 8 chr2 188994254 188994382 -61693472 + CT-rich Low_complexity Low_complexity 2 130 0 348 24 0 0 chr2 188994382 188994423 -61693431 + (CA)n Simple_repeat Simple_repeat 1 41 0 2174 291 85 54 chr2 188994628 188995889 -61691965 - HAL1 LINE L1 -1191 1316 17 2102 116 3 10 chr2 188996358 188996659 -61691195 + AluSc SINE Alu 1 299 -10 1965 113 0 10 chr2 188997597 188997899 -61689955 + L1PA16 LINE L1 5582 5880 -286 1351 196 4 11 chr2 188998008 188998274 -61689580 + L1PA16 LINE L1 5894 6157 -9 327 65 0 0 chr2 188998338 188998384 -61689470 + (CA)n Simple_repeat Simple_repeat 2 47 0 608 346 12 8 chr2 188999023 188999263 -61688591 - L3 LINE CR1 -5 1572 1332 1766 156 3 26 chr2 188999368 188999676 -61688178 + AluJo SINE Alu 1 301 -11 1312 146 55 5 chr2 188999848 189000067 -61687787 - MER30 DNA MER1_type 0 230 1 472 293 64 56 chr2 189001162 189001521 -61686333 + HAL1b LINE L1 366 727 -621 964 305 93 9 chr2 189001571 189002109 -61685745 - HAL1 LINE L1 -829 1678 1096 231 326 32 0 chr2 189002530 189002625 -61685229 + LTR67 LTR ERVL 432 529 -28 1711 237 6 3 chr2 189002767 189003121 -61684733 - MLT1E2 LTR MaLR -2 624 270 441 272 118 36 chr2 189003288 189003620 -61684234 - MLT1E2 LTR MaLR -281 343 1 2210 193 62 42 chr2 189003922 189004042 -61683812 - MER67D LTR ERV1 0 514 398 656 103 0 0 chr2 189004042 189004139 -61683715 - L1PA7 LINE L1 -1 6153 6057 2210 193 62 42 chr2 189004139 189004522 -61683332 - MER67D LTR ERV1 -116 398 1 2102 137 0 3 chr2 189005397 189005703 -61682151 - AluJb SINE Alu -7 305 1 23 33 0 0 chr2 189006167 189006197 -61681657 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 189006500 189006528 -61681326 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr2 189007109 189007136 -61680718 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 369 43 0 0 chr2 189007135 189007182 -61680672 + (GA)n Simple_repeat Simple_repeat 2 48 0 226 81 27 0 chr2 189007203 189007240 -61680614 - Alu SINE Alu -121 181 144 187 263 92 40 chr2 189007270 189007346 -61680508 + L2 LINE L2 3185 3264 -8 4941 150 12 38 chr2 189009782 189011079 -61676775 - L1PB4 LINE L1 -30 6126 4864 28 0 0 0 chr2 189011263 189011291 -61676563 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 189011745 189011772 -61676082 + AT_rich Low_complexity Low_complexity 1 27 0 1514 158 96 6 chr2 189013767 189014122 -61673732 - Charlie5 DNA MER1_type 0 2620 2234 543 208 4 0 chr2 189014130 189014248 -61673606 - Charlie5 DNA MER1_type -2511 101 1 241 189 57 19 chr2 189014262 189014315 -61673539 - L2 LINE L2 -8 3305 3251 225 308 13 0 chr2 189014320 189014398 -61673456 + MER116 DNA Mariner 2 80 0 21 36 0 0 chr2 189015038 189015066 -61672788 + AT_rich Low_complexity Low_complexity 1 28 0 233 283 158 25 chr2 189015251 189015491 -61672363 - L1ME LINE L1 -305 5816 5545 23 33 0 0 chr2 189016929 189016959 -61670895 + AT_rich Low_complexity Low_complexity 1 30 0 31 0 0 0 chr2 189017556 189017587 -61670267 + AT_rich Low_complexity Low_complexity 1 31 0 328 71 88 9 chr2 189018139 189018252 -61669602 + (TA)n Simple_repeat Simple_repeat 2 123 0 184 75 25 25 chr2 189018683 189018723 -61669131 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 29 0 0 0 chr2 189019024 189019053 -61668801 + AT_rich Low_complexity Low_complexity 1 29 0 227 54 27 0 chr2 189019285 189019322 -61668532 + (TA)n Simple_repeat Simple_repeat 1 38 0 2919 166 41 4 chr2 189069513 189070002 -61617852 - MER1A DNA MER1_type -19 510 4 286 243 29 29 chr2 189070318 189070421 -61617433 + LTR67 LTR ERVL 432 534 -23 200 229 0 21 chr2 189071229 189071277 -61616577 + (CATA)n Simple_repeat Simple_repeat 2 48 0 181 211 184 13 chr2 189071292 189071368 -61616486 - MIR SINE MIR -55 207 119 1074 149 0 60 chr2 189071385 189071653 -61616201 + AluSc SINE Alu 1 252 -57 1260 119 5 30 chr2 189071779 189071980 -61615874 + AluSc SINE Alu 114 309 0 221 0 35 0 chr2 189072239 189072268 -61615586 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 288 259 115 43 chr2 189073441 189073580 -61614274 - L2 LINE L2 -4 3309 3161 233 160 20 0 chr2 189074029 189074079 -61613775 + (TA)n Simple_repeat Simple_repeat 1 51 0 576 229 86 0 chr2 189074278 189074436 -61613418 + MER58A DNA MER1_type 1 172 0 264 105 0 0 chr2 189074422 189074460 -61613394 + MER58A DNA MER1_type 187 224 0 * 199 390 37 7 chr2 189074537 189074673 -61613181 + L2 LINE L2 2945 3084 -188 212 321 0 24 chr2 189074841 189074925 -61612929 + GA-rich Low_complexity Low_complexity 1 82 0 23 54 0 0 chr2 189075265 189075302 -61612552 + AT_rich Low_complexity Low_complexity 1 37 0 2523 63 0 0 chr2 189076563 189076862 -61610992 - AluY SINE Alu -12 299 1 624 311 55 0 chr2 189077065 189077300 -61610554 + L2 LINE L2 2820 3067 -246 425 221 57 8 chr2 189077308 189077430 -61610424 - MER77 LTR ERV1 0 605 478 322 264 44 50 chr2 189077813 189077972 -61609882 + L2 LINE L2 3094 3251 -62 227 164 0 36 chr2 189078424 189078479 -61609375 + A-rich Low_complexity Low_complexity 5 57 0 6744 212 74 33 chr2 189079495 189080776 -61607078 - L1 LINE L1 -1862 4172 2779 2404 97 0 0 chr2 189080776 189081087 -61606767 - AluY SINE Alu 0 311 1 6744 212 74 33 chr2 189081087 189081814 -61606040 - L1 LINE L1 -3255 2779 2083 3751 104 29 12 chr2 189081816 189082175 -61605679 - L1PB1 LINE L1 0 6151 5777 2139 121 53 31 chr2 189082175 189082531 -61605323 + THE1B LTR MaLR 1 364 0 3751 104 29 12 chr2 189082531 189082750 -61605104 - L1PB1 LINE L1 -374 5777 5563 11652 125 127 5 chr2 189082753 189084725 -61603129 - L1PBa LINE L1 -4648 2215 3 1965 251 71 68 chr2 189084737 189085294 -61602560 - L1 LINE L1 -3931 2103 1550 343 210 0 11 chr2 189085294 189085391 -61602463 + Tigger5 DNA MER2_type 1 2323 0 1965 251 71 68 chr2 189085391 189085776 -61602078 - L1 LINE L1 -4484 1550 1030 1765 163 90 80 chr2 189085776 189086200 -61601654 + MSTA LTR MaLR 1 428 0 1965 251 71 68 chr2 189086200 189086444 -61601410 - L1 LINE L1 -5004 1030 788 1411 298 96 28 chr2 189086477 189087098 -61600756 - L1 LINE L1 -5329 626 2 494 228 71 0 chr2 189088725 189088852 -61599002 - MER52A LTR ERV1 -664 1091 956 1580 226 128 42 chr2 189088853 189089753 -61598101 - MER52A LTR ERV1 -658 1097 1 * 2788 127 78 30 chr2 189089753 189090287 -61597567 - LTR8A LTR ERV1 -167 560 1 365 358 43 27 chr2 189090782 189091039 -61596815 + MIR SINE MIR 2 262 0 252 0 0 0 chr2 189091087 189091115 -61596739 + (TG)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr2 189091116 189091138 -61596716 + (GA)n Simple_repeat Simple_repeat 1 22 0 234 0 0 0 chr2 189091194 189091220 -61596634 + (T)n Simple_repeat Simple_repeat 1 26 0 356 239 195 19 chr2 189091564 189091723 -61596131 - MIR SINE MIR -50 212 26 1599 175 52 0 chr2 189091899 189092190 -61595664 - AluJo SINE Alu -6 306 1 1047 277 177 83 chr2 189092461 189093265 -61594589 - MER52A LTR ERV1 -225 1530 652 6341 143 57 24 chr2 189093401 189094593 -61593261 - Tigger3b DNA MER2_type 0 1231 1 1262 158 37 0 chr2 189095163 189095378 -61592476 - MLT1A1 LTR MaLR 0 365 143 389 312 123 39 chr2 189095997 189096786 -61591068 + L1ME4a LINE L1 5265 6119 -2 21 57 0 0 chr2 189097652 189097687 -61590167 + AT_rich Low_complexity Low_complexity 1 35 0 2234 115 3 0 chr2 189099145 189099441 -61588413 - AluSp SINE Alu -16 297 1 1947 129 4 0 chr2 189099445 189099716 -61588138 - AluSx SINE Alu -12 300 29 546 293 125 51 chr2 189100981 189101510 -61586344 - MLT1K LTR MaLR -8 580 13 24 0 0 0 chr2 189102105 189102129 -61585725 + AT_rich Low_complexity Low_complexity 1 24 0 1926 152 3 3 chr2 189102539 189102836 -61585018 - AluJb SINE Alu -15 297 1 905 196 208 28 chr2 189103170 189103425 -61584429 + LTR16C LTR ERVL 191 491 0 281 187 520 0 chr2 189103680 189103803 -61584051 + MER3 DNA MER1_type 23 209 0 229 279 49 0 chr2 189103756 189103817 -61584037 - MER3 DNA MER1_type -115 94 31 * 285 260 156 31 chr2 189104294 189104486 -61583368 + L2 LINE L2 2844 3059 -254 239 315 14 0 chr2 189104630 189104703 -61583151 + L2 LINE L2 3239 3312 -1 379 325 93 48 chr2 189106495 189106913 -61580941 - MLT1K LTR MaLR -62 526 90 332 339 89 0 chr2 189107074 189107186 -61580668 + MIR SINE MIR 31 152 -56 1300 137 0 0 chr2 189107756 189107946 -61579908 - AluSg SINE Alu -6 306 117 981 105 8 0 chr2 189108556 189108689 -61579165 - AluSg SINE Alu -176 134 1 379 307 85 7 chr2 189109088 189109241 -61578613 + MIR3 SINE MIR 41 205 -3 861 154 264 0 chr2 189109705 189109887 -61577967 - MER30 DNA MER1_type 0 230 1 231 333 0 12 chr2 189110187 189110268 -61577586 - HAL1 LINE L1 -2214 293 214 434 117 138 43 chr2 189110676 189110770 -61577084 - FLAM_A SINE Alu -15 127 25 726 190 71 22 chr2 189111405 189111589 -61576265 - MLT1B LTR MaLR 0 390 198 2217 241 104 29 chr2 189111607 189112289 -61575565 - MER21B LTR ERV1 -111 752 20 455 163 10 92 chr2 189112290 189112388 -61575466 - MER21B LTR ERV1 -759 104 15 645 302 69 13 chr2 189113101 189113333 -61574521 - MIR SINE MIR -17 245 1 5251 131 59 50 chr2 189113654 189114259 -61573595 - L1MA3 LINE L1 0 6305 5707 274 211 0 0 chr2 189114259 189114311 -61573543 + MER9 LTR ERVK 460 511 0 5251 131 59 50 chr2 189114311 189115144 -61572710 - L1MA3 LINE L1 -598 5707 4770 21 71 0 0 chr2 189115377 189115419 -61572435 + AT_rich Low_complexity Low_complexity 1 42 0 265 258 0 0 chr2 189115636 189115702 -61572152 - MLT1I LTR MaLR -26 383 318 233 100 0 0 chr2 189115882 189115912 -61571942 - MLT1I LTR MaLR -274 135 106 21 71 0 0 chr2 189116298 189116340 -61571514 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 189118505 189118528 -61569326 + AT_rich Low_complexity Low_complexity 1 23 0 225 0 0 0 chr2 189119439 189119464 -61568390 + (T)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr2 189120904 189120925 -61566929 + AT_rich Low_complexity Low_complexity 1 21 0 255 371 21 14 chr2 189122703 189122843 -61565011 - L2 LINE L2 -577 2737 2597 1784 171 81 18 chr2 189123273 189123670 -61564184 + MSTB LTR MaLR 5 426 0 347 333 32 0 chr2 189123692 189123818 -61564036 - MIR SINE MIR -49 213 84 2156 102 3 3 chr2 189124769 189125074 -61562780 - AluSx SINE Alu 0 305 1 193 352 29 19 chr2 189125461 189125566 -61562288 + L2 LINE L2 2725 2830 -484 348 24 0 0 chr2 189125596 189125637 -61562217 + (CA)n Simple_repeat Simple_repeat 1 41 0 477 343 48 48 chr2 189125674 189125983 -61561871 + L2 LINE L2 2924 3232 -40 300 330 191 5 chr2 189126047 189126256 -61561598 + MIR SINE MIR 15 262 0 2560 188 18 18 chr2 189126399 189126910 -61560944 + MER82 DNA MER2_type 8 518 -135 1804 155 24 38 chr2 189126911 189127536 -61560318 + L1M4 LINE L1 4930 5597 -577 2234 126 6 3 chr2 189127539 189127881 -61559973 - LOR1a LTR ERV1 -154 343 1 327 175 0 0 chr2 189127895 189127952 -61559902 + MLT1E2 LTR MaLR 17 73 -553 227 349 104 9 chr2 189129191 189129297 -61558557 + MIR3 SINE MIR 3 118 -90 490 272 164 25 chr2 189129347 189129805 -61558049 - L1M4 LINE L1 -4833 1447 917 1370 105 43 0 chr2 189129810 189130019 -61557835 + L1PB3 LINE L1 5937 6154 0 27 0 0 0 chr2 189130032 189130059 -61557795 + AT_rich Low_complexity Low_complexity 1 27 0 251 182 0 0 chr2 189130090 189130145 -61557709 - L1ME LINE L1 -5504 892 838 400 249 55 25 chr2 189130756 189130908 -61556946 - L1ME LINE L1 -5896 309 141 21 36 0 0 chr2 189130952 189130980 -61556874 + AT_rich Low_complexity Low_complexity 1 28 0 763 175 0 8 chr2 189131055 189131181 -61556673 - FLAM_C SINE Alu -18 125 1 236 222 167 0 chr2 189131322 189131376 -61556478 - Charlie8 DNA MER1_type -1000 1417 1355 276 303 259 33 chr2 189131747 189132446 -61555408 + L2 LINE L2 1603 2459 -855 211 279 90 66 chr2 189132600 189132722 -61555132 - MIR SINE MIR -49 213 89 203 241 138 11 chr2 189132775 189132862 -61554992 + MIR SINE MIR 64 161 -101 1850 122 45 58 chr2 189133054 189133432 -61554422 + THE1C LTR MaLR 3 375 0 782 146 8 0 chr2 189133748 189133871 -61553983 + FLAM_C SINE Alu 5 128 -5 314 205 27 62 chr2 189134084 189134196 -61553658 + L1ME3A LINE L1 5946 6053 -117 29 28 0 0 chr2 189136476 189136512 -61551342 + AT_rich Low_complexity Low_complexity 1 36 0 288 0 0 0 chr2 189137931 189137963 -61549891 + (CAA)n Simple_repeat Simple_repeat 2 33 0 300 259 0 25 chr2 189138567 189138648 -61549206 + CT-rich Low_complexity Low_complexity 3 81 0 23 0 0 0 chr2 189138854 189138877 -61548977 + AT_rich Low_complexity Low_complexity 1 23 0 1542 146 92 25 chr2 189139003 189139284 -61548570 - AluSx SINE Alu -12 300 1 4455 211 49 25 chr2 189140610 189140791 -61547063 + L1MB7 LINE L1 3966 4141 -2043 2142 128 0 3 chr2 189140791 189141096 -61546758 + AluSx SINE Alu 1 304 -8 4455 211 49 25 chr2 189141096 189141327 -61546527 + L1MB7 LINE L1 4141 4365 -1819 1649 211 3 10 chr2 189141327 189141630 -61546224 + AluJo SINE Alu 1 301 -11 1942 135 3 16 chr2 189141634 189141938 -61545916 + AluSq SINE Alu 3 302 -11 4455 211 49 25 chr2 189141938 189143352 -61544502 + L1MB7 LINE L1 4367 5831 -353 2695 33 0 0 chr2 189143352 189143656 -61544198 + AluY SINE Alu 1 304 -7 263 281 62 25 chr2 189143660 189143820 -61544034 + MER104 DNA Tc2 3 168 -12 2093 185 47 23 chr2 189143823 189145089 -61542765 + L1MB7 LINE L1 4847 6184 0 23 68 0 0 chr2 189145137 189145181 -61542673 + AT_rich Low_complexity Low_complexity 1 44 0 253 236 86 0 chr2 189145277 189145372 -61542482 + L1P5 LINE L1 5363 5462 -694 21 36 0 0 chr2 189145477 189145505 -61542349 + AT_rich Low_complexity Low_complexity 1 28 0 207 227 45 0 chr2 189145599 189145665 -61542189 + (CA)n Simple_repeat Simple_repeat 2 70 0 22 35 0 0 chr2 189146056 189146085 -61541769 + AT_rich Low_complexity Low_complexity 1 29 0 204 323 65 0 chr2 189146934 189146996 -61540858 + MIR3 SINE MIR 140 205 -3 23 0 0 0 chr2 189147542 189147565 -61540289 + AT_rich Low_complexity Low_complexity 1 23 0 391 21 0 0 chr2 189147942 189147989 -61539865 - MADE1 DNA Mariner -33 47 1 817 134 0 0 chr2 189148024 189148136 -61539718 - FLAM_C SINE Alu -26 117 6 477 281 122 6 chr2 189148152 189148316 -61539538 - MIR SINE MIR -65 197 15 737 120 0 70 chr2 189148414 189148556 -61539298 + FLAM_C SINE Alu 12 143 0 1355 209 188 14 chr2 189148577 189149007 -61538847 + MLT1D LTR MaLR 1 505 0 359 295 72 36 chr2 189150189 189150328 -61537526 + L2 LINE L2 2937 3080 -192 275 265 12 12 chr2 189151078 189151161 -61536693 + LTR67 LTR ERVL 464 546 -11 224 390 13 13 chr2 189151207 189151284 -61536570 - L2 LINE L2 -64 3208 3132 720 299 80 11 chr2 189152281 189152555 -61535299 - MLT1I LTR MaLR -23 386 94 234 314 35 35 chr2 189152812 189152898 -61534956 - MIR SINE MIR -157 105 20 368 295 56 64 chr2 189153411 189153645 -61534209 - MIR SINE MIR -3 259 28 478 198 30 0 chr2 189154027 189154194 -61533660 + (TA)n Simple_repeat Simple_repeat 2 173 0 924 270 102 37 chr2 189154252 189154633 -61533221 - L2 LINE L2 0 3313 2908 366 274 294 17 chr2 189154637 189154929 -61532925 + LTR33 LTR ERVL 143 515 -6 451 224 335 0 chr2 189154930 189155100 -61532754 - L2 LINE L2 -685 2629 2403 891 271 109 26 chr2 189155109 189155641 -61532213 + L1MC4a LINE L1 5297 5872 -1936 1674 175 3 26 chr2 189155758 189156066 -61531788 + AluJb SINE Alu 2 302 -10 2335 94 3 0 chr2 189157033 189157331 -61530523 - AluSg SINE Alu -11 299 1 278 172 47 0 chr2 189158164 189158228 -61529626 + L1MA10 LINE L1 6266 6332 -2 198 103 0 0 chr2 189158271 189158300 -61529554 + (TG)n Simple_repeat Simple_repeat 1 29 0 1255 170 4 30 chr2 189158438 189158668 -61529186 - AluJo SINE Alu -2 310 87 328 267 126 94 chr2 189158854 189158953 -61528901 - L2 LINE L2 0 3313 3219 2225 121 0 0 chr2 189158953 189159251 -61528603 - AluSq SINE Alu -15 298 1 328 267 126 94 chr2 189159251 189159428 -61528426 - L2 LINE L2 -94 3219 3028 338 309 123 43 chr2 189159649 189160135 -61527719 - L2 LINE L2 -353 2961 2437 1016 174 0 81 chr2 189160193 189160440 -61527414 + AluJo SINE Alu 72 298 -14 211 297 16 0 chr2 189160452 189160516 -61527338 - L2 LINE L2 -944 2370 2306 2132 116 31 0 chr2 189161199 189161491 -61526363 + AluSx SINE Alu 1 301 -11 315 0 0 0 chr2 189161598 189161633 -61526221 + (TG)n Simple_repeat Simple_repeat 2 36 0 22 70 0 0 chr2 189161633 189161676 -61526178 + AT_rich Low_complexity Low_complexity 1 43 0 1768 136 4 43 chr2 189162027 189162307 -61525547 - MER1B DNA MER1_type -70 269 1 750 114 0 2 chr2 189163229 189163475 -61524379 + AluSx SINE Alu 1 297 -15 369 283 28 7 chr2 189164336 189164481 -61523373 + GA-rich Low_complexity Low_complexity 1 148 0 218 296 8 98 chr2 189165723 189165855 -61521999 + MER5B DNA MER1_type 59 178 0 211 295 25 41 chr2 189166596 189166718 -61521136 - MIR SINE MIR -55 207 88 1558 193 26 7 chr2 189167467 189167773 -61520081 - AluJb SINE Alu 0 312 1 4559 206 49 29 chr2 189171027 189171208 -61516646 + L1MB7 LINE L1 3966 4142 -2042 2112 128 0 3 chr2 189171208 189171513 -61516341 + AluSx SINE Alu 1 304 -8 4559 206 49 29 chr2 189171513 189171744 -61516110 + L1MB7 LINE L1 4142 4367 -1817 1633 211 3 10 chr2 189171744 189172047 -61515807 + AluJo SINE Alu 1 301 -11 1919 135 3 16 chr2 189172051 189172355 -61515499 + AluSq SINE Alu 3 302 -11 4559 206 49 29 chr2 189172355 189173771 -61514083 + L1MB7 LINE L1 4369 5841 -343 2427 66 7 3 chr2 189173771 189174075 -61513779 + AluY SINE Alu 1 305 -6 4559 206 49 29 chr2 189174075 189174411 -61513443 + L1MB7 LINE L1 5841 6169 -15 1711 299 96 20 chr2 189174422 189175315 -61512539 - L2 LINE L2 -187 3126 2171 1761 176 0 0 chr2 189175421 189175733 -61512121 + AluJb SINE Alu 2 313 0 2081 91 0 52 chr2 189177482 189177789 -61510065 + AluSx SINE Alu 1 291 -21 342 67 0 0 chr2 189177803 189177848 -61510006 + (TA)n Simple_repeat Simple_repeat 2 46 0 28 48 0 0 chr2 189178435 189178477 -61509377 + AT_rich Low_complexity Low_complexity 1 42 0 305 204 0 0 chr2 189183195 189183249 -61504605 - MLT1B LTR MaLR -336 54 1 1041 207 31 0 chr2 189183249 189183505 -61504349 - MER3 DNA MER1_type 0 2497 2234 655 119 8 34 chr2 189183508 189183626 -61504228 - MER3 DNA MER1_type -41 168 54 2194 113 3 3 chr2 189184126 189184435 -61503419 + AluSc SINE Alu 1 309 0 662 168 0 30 chr2 189184543 189184674 -61503180 + MER3 DNA MER1_type 42 168 -41 1187 204 50 39 chr2 189184677 189184935 -61502919 + MER3 DNA MER1_type 2234 2499 -125 2210 139 34 16 chr2 189184935 189185316 -61502538 + MLT1B LTR MaLR 3 390 0 1187 204 50 39 chr2 189185316 189185440 -61502414 + MER3 DNA MER1_type 2499 2620 -4 24 67 0 0 chr2 189186147 189186192 -61501662 + AT_rich Low_complexity Low_complexity 1 45 0 201 162 0 0 chr2 189186674 189186711 -61501143 + A-rich Low_complexity Low_complexity 1 37 0 22 70 0 0 chr2 189186774 189186817 -61501037 + AT_rich Low_complexity Low_complexity 1 43 0 422 245 113 35 chr2 189187323 189187554 -61500300 - L1ME1 LINE L1 -240 5921 5669 245 308 48 10 chr2 189187584 189187688 -61500166 - L1ME1 LINE L1 -577 5568 5461 316 313 106 21 chr2 189187871 189188389 -61499465 - L1ME1 LINE L1 -2332 3797 3236 553 277 201 5 chr2 189188410 189188778 -61499076 - L1ME1 LINE L1 -3126 3003 2564 623 186 62 31 chr2 189188780 189188909 -61498945 - FLAM_C SINE Alu 0 133 1 333 0 0 0 chr2 189188996 189189033 -61498821 + (TG)n Simple_repeat Simple_repeat 2 38 0 246 337 33 11 chr2 189189037 189189129 -61498725 - L1ME1 LINE L1 -5426 693 600 399 272 103 43 chr2 189189277 189189461 -61498393 - L1ME1 LINE L1 -5923 196 2 32 0 0 0 chr2 189189941 189189973 -61497881 + AT_rich Low_complexity Low_complexity 1 32 0 530 270 68 43 chr2 189190492 189190770 -61497084 + L2 LINE L2 2868 3152 -161 199 213 80 80 chr2 189191522 189191597 -61496257 - L3b LINE CR1 -213 1370 1296 2334 88 10 0 chr2 189191671 189191967 -61495887 - AluSx SINE Alu -13 299 1 344 254 223 15 chr2 189192046 189192243 -61495611 - MER112 DNA MER1_type -6 254 17 2532 18 0 0 chr2 189192808 189193089 -61494765 + AluYb8 SINE Alu 33 313 -5 1332 198 88 11 chr2 189193528 189193811 -61494043 + AluJo SINE Alu 1 305 -7 479 217 19 28 chr2 189194193 189194299 -61493555 - MER81 DNA DNA -3 111 7 23 54 0 0 chr2 189194626 189194663 -61493191 + AT_rich Low_complexity Low_complexity 1 37 0 1621 163 0 15 chr2 189195174 189195438 -61492416 + AluSq SINE Alu 4 263 -50 1296 106 8 98 chr2 189195440 189195521 -61492333 + L1MA4 LINE L1 6054 6141 -159 1603 159 76 0 chr2 189195521 189195797 -61492057 + AluSq SINE Alu 1 297 -16 1296 106 8 98 chr2 189195797 189195980 -61491874 + L1MA4 LINE L1 6141 6294 -6 510 215 0 0 chr2 189196974 189197104 -61490750 + (TA)n Simple_repeat Simple_repeat 1 130 0 2043 90 0 93 chr2 189197228 189197549 -61490305 + AluSg SINE Alu 1 291 -19 376 210 43 113 chr2 189197661 189197847 -61490007 + L1ME LINE L1 5524 5696 -425 1889 155 0 0 chr2 189198485 189198782 -61489072 + AluJb SINE Alu 1 297 -15 332 296 26 9 chr2 189199341 189199456 -61488398 + GA-rich Low_complexity Low_complexity 1 117 0 231 210 48 48 chr2 189199634 189199696 -61488158 + MIR SINE MIR 87 148 -60 569 305 66 58 chr2 189199908 189200017 -61487837 + L2 LINE L2 2504 2611 -661 2198 88 3 22 chr2 189200017 189200334 -61487520 - AluY SINE Alu 0 311 1 569 305 66 58 chr2 189200334 189200828 -61487026 + L2 LINE L2 2611 3112 -160 273 426 40 0 chr2 189201175 189201323 -61486531 + L2 LINE L2 3107 3260 -12 2346 91 0 0 chr2 189201395 189201704 -61486150 + AluSc SINE Alu 1 309 0 1805 184 0 0 chr2 189201775 189202074 -61485780 + AluJb SINE Alu 1 299 -13 1910 156 16 0 chr2 189203189 189203496 -61484358 + AluJb SINE Alu 1 312 0 289 299 113 17 chr2 189206197 189206374 -61481480 - MIR SINE MIR -12 250 57 239 247 189 58 chr2 189207192 189207347 -61480507 + L1ME4a LINE L1 5782 5915 -206 360 0 0 0 chr2 189207347 189207387 -61480467 + (CA)n Simple_repeat Simple_repeat 2 41 0 239 247 189 58 chr2 189207387 189207522 -61480332 + L1ME4a LINE L1 5915 6110 -11 1835 135 10 10 chr2 189208508 189208819 -61479035 - AluJb SINE Alu -1 311 1 793 271 71 4 chr2 189209356 189209596 -61478258 + MIR SINE MIR 7 262 0 222 316 42 11 chr2 189210606 189210701 -61477153 + L2 LINE L2 3215 3312 -1 24 32 0 0 chr2 189210897 189210928 -61476926 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 189211962 189211985 -61475869 + AT_rich Low_complexity Low_complexity 1 23 0 1052 148 0 12 chr2 189211985 189212147 -61475707 - AluSg/x SINE Alu -24 288 129 36 106 0 0 chr2 189212356 189212497 -61475357 + AT_rich Low_complexity Low_complexity 1 141 0 27 0 0 0 chr2 189212833 189212860 -61474994 + AT_rich Low_complexity Low_complexity 1 27 0 459 191 27 55 chr2 189212863 189212973 -61474881 - FLAM_C SINE Alu -10 133 27 408 97 0 0 chr2 189212975 189213037 -61474817 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 21 57 0 0 chr2 189213112 189213147 -61474707 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr2 189213744 189213770 -61474084 + AT_rich Low_complexity Low_complexity 1 26 0 30 59 0 0 chr2 189213937 189213988 -61473866 + AT_rich Low_complexity Low_complexity 1 51 0 1629 151 32 11 chr2 189213990 189214268 -61473586 - AluJo SINE Alu -28 284 1 540 279 12 63 chr2 189215478 189215732 -61472122 + MER112 DNA MER1_type 8 248 -12 23 0 0 0 chr2 189216087 189216110 -61471744 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr2 189216411 189216446 -61471408 + AT_rich Low_complexity Low_complexity 1 35 0 812 251 14 28 chr2 189216932 189217143 -61470711 - MIR SINE MIR -14 248 41 196 286 0 0 chr2 189217434 189217483 -61470371 + MIR SINE MIR 65 113 -149 231 210 0 50 chr2 189217655 189217755 -61470099 + (CAAA)n Simple_repeat Simple_repeat 2 96 0 340 313 8 39 chr2 189217897 189218025 -61469829 - MIR SINE MIR -67 141 18 759 196 71 6 chr2 189218222 189218390 -61469464 - MER58A DNA MER1_type -1 223 45 396 277 25 17 chr2 189219990 189220109 -61467745 + MER5B DNA MER1_type 1 120 -58 219 36 0 0 chr2 189220339 189220367 -61467487 + (CA)n Simple_repeat Simple_repeat 1 28 0 1588 163 54 11 chr2 189220635 189220912 -61466942 - AluJo SINE Alu -18 294 6 882 342 169 28 chr2 189221742 189222943 -61464911 - L2 LINE L2 -251 3062 1698 1814 94 4 8 chr2 189222999 189223255 -61464599 + AluSx SINE Alu 45 299 -13 883 199 20 146 chr2 189224333 189224724 -61463130 + L1MC4 LINE L1 7533 7874 -168 242 274 32 0 chr2 189224979 189225074 -61462780 - L1ME4a LINE L1 -90 6031 5934 21 71 0 0 chr2 189225089 189225131 -61462723 + AT_rich Low_complexity Low_complexity 1 42 0 1577 186 0 0 chr2 189225285 189225538 -61462316 - AluJb SINE Alu -59 253 1 183 340 60 20 chr2 189225585 189225685 -61462169 + L2 LINE L2 2896 2999 -273 220 377 19 26 chr2 189225836 189225990 -61461864 - L2 LINE L2 -273 2999 2847 2244 97 3 10 chr2 189226001 189226311 -61461543 - AluSx SINE Alu -4 308 1 2948 135 29 6 chr2 189226319 189226831 -61461023 - L1MA5A LINE L1 -1 6296 5773 313 141 33 22 chr2 189226874 189226966 -61460888 + (TA)n Simple_repeat Simple_repeat 2 94 0 1717 128 4 0 chr2 189226968 189227218 -61460636 - L1MA5A LINE L1 -506 5791 5541 36 70 0 0 chr2 189228262 189228333 -61459521 + AT_rich Low_complexity Low_complexity 1 71 0 195 100 0 0 chr2 189228971 189229001 -61458853 + (A)n Simple_repeat Simple_repeat 1 30 0 206 265 147 59 chr2 189229194 189229296 -61458558 - L2 LINE L2 0 3272 3162 26 0 0 0 chr2 189229301 189229327 -61458527 + AT_rich Low_complexity Low_complexity 1 26 0 2730 20 0 0 chr2 189229442 189229746 -61458108 + AluY SINE Alu 1 304 -7 263 281 62 25 chr2 189229750 189229910 -61457944 + MER104 DNA Tc2 3 168 -12 2093 185 47 23 chr2 189229913 189231179 -61456675 + L1MB7 LINE L1 4847 6184 0 23 68 0 0 chr2 189231227 189231271 -61456583 + AT_rich Low_complexity Low_complexity 1 44 0 253 236 86 0 chr2 189231367 189231462 -61456392 + L1P5 LINE L1 5363 5462 -694 21 36 0 0 chr2 189231567 189231595 -61456259 + AT_rich Low_complexity Low_complexity 1 28 0 207 227 45 0 chr2 189231689 189231755 -61456099 + (CA)n Simple_repeat Simple_repeat 2 70 0 22 35 0 0 chr2 189232146 189232175 -61455679 + AT_rich Low_complexity Low_complexity 1 29 0 204 323 65 0 chr2 189233024 189233086 -61454768 + MIR3 SINE MIR 140 205 -3 23 0 0 0 chr2 189233632 189233655 -61454199 + AT_rich Low_complexity Low_complexity 1 23 0 365 43 0 0 chr2 189234032 189234079 -61453775 - MADE1 DNA Mariner -33 47 1 757 143 0 0 chr2 189234114 189234226 -61453628 - FLAM_C SINE Alu -26 117 6 477 281 122 6 chr2 189234242 189234406 -61453448 - MIR SINE MIR -65 197 15 737 120 0 70 chr2 189234504 189234646 -61453208 + FLAM_C SINE Alu 12 143 0 1355 209 188 14 chr2 189234667 189235097 -61452757 + MLT1D LTR MaLR 1 505 0 359 295 72 36 chr2 189236279 189236418 -61451436 + L2 LINE L2 2937 3080 -192 275 265 12 12 chr2 189237168 189237251 -61450603 + LTR67 LTR ERVL 464 546 -11 224 390 13 13 chr2 189237297 189237374 -61450480 - L2 LINE L2 -64 3208 3132 720 299 80 11 chr2 189238371 189238645 -61449209 - MLT1I LTR MaLR -23 386 94 234 314 35 35 chr2 189238902 189238988 -61448866 - MIR SINE MIR -157 105 20 368 295 56 64 chr2 189239501 189239735 -61448119 - MIR SINE MIR -3 259 28 478 198 30 0 chr2 189240117 189240284 -61447570 + (TA)n Simple_repeat Simple_repeat 2 173 0 924 270 102 37 chr2 189240342 189240723 -61447131 - L2 LINE L2 0 3313 2908 419 266 290 17 chr2 189240727 189241020 -61446834 + LTR33 LTR ERVL 143 515 -6 451 224 335 0 chr2 189241021 189241191 -61446663 - L2 LINE L2 -685 2629 2403 891 271 109 26 chr2 189241200 189241732 -61446122 + L1MC4a LINE L1 5297 5872 -1936 1674 175 3 26 chr2 189241849 189242157 -61445697 + AluJb SINE Alu 2 302 -10 2380 94 0 0 chr2 189243124 189243423 -61444431 - AluSg SINE Alu -11 299 1 278 172 47 0 chr2 189244256 189244320 -61443534 + L1MA10 LINE L1 6266 6332 -2 198 103 0 0 chr2 189244363 189244392 -61443462 + (TG)n Simple_repeat Simple_repeat 1 29 0 1255 170 4 30 chr2 189244530 189244760 -61443094 - AluJo SINE Alu -2 310 87 328 267 126 94 chr2 189244946 189245045 -61442809 - L2 LINE L2 0 3313 3219 2225 121 0 0 chr2 189245045 189245343 -61442511 - AluSq SINE Alu -15 298 1 328 267 126 94 chr2 189245343 189245520 -61442334 - L2 LINE L2 -94 3219 3028 338 309 123 43 chr2 189245741 189246227 -61441627 - L2 LINE L2 -353 2961 2437 1016 174 0 81 chr2 189246285 189246532 -61441322 + AluJo SINE Alu 72 298 -14 211 297 16 0 chr2 189246544 189246608 -61441246 - L2 LINE L2 -944 2370 2306 2132 116 31 0 chr2 189247291 189247583 -61440271 + AluSx SINE Alu 1 301 -11 315 0 0 0 chr2 189247690 189247725 -61440129 + (TG)n Simple_repeat Simple_repeat 2 36 0 22 70 0 0 chr2 189247725 189247768 -61440086 + AT_rich Low_complexity Low_complexity 1 43 0 1768 136 4 43 chr2 189248119 189248399 -61439455 - MER1B DNA MER1_type -70 269 1 750 114 0 2 chr2 189249321 189249567 -61438287 + AluSx SINE Alu 1 294 -15 369 283 28 7 chr2 189250428 189250573 -61437281 + GA-rich Low_complexity Low_complexity 1 148 0 219 296 8 98 chr2 189251815 189251947 -61435907 + MER5B DNA MER1_type 59 178 0 198 295 25 41 chr2 189252688 189252810 -61435044 - MIR SINE MIR -55 207 88 1604 197 26 3 chr2 189253559 189253864 -61433990 - AluJb SINE Alu 0 312 1 21 36 0 0 chr2 189255752 189255780 -61432074 + GC_rich Low_complexity Low_complexity 1 28 0 306 277 140 85 chr2 189255949 189256278 -61431576 - L1M2 LINE L1 -5925 924 578 300 262 78 19 chr2 189256804 189256907 -61430947 + L2 LINE L2 3205 3313 0 1440 188 38 14 chr2 189257178 189257466 -61430388 + AluJo SINE Alu 1 295 -7 2090 110 3 3 chr2 189257466 189257758 -61430096 + AluSx SINE Alu 1 292 -20 2051 101 7 55 chr2 189258337 189258470 -61429384 + AluSx SINE Alu 3 141 -171 2148 118 0 14 chr2 189258470 189258767 -61429087 + AluSg SINE Alu 1 293 -17 2051 101 7 55 chr2 189258767 189258941 -61428913 + AluSx SINE Alu 141 295 -17 548 224 0 45 chr2 189259410 189259544 -61428310 + MIR SINE MIR 47 174 -88 767 112 0 0 chr2 189259606 189259713 -61428141 - AluSc SINE Alu -19 290 184 419 250 0 0 chr2 189260661 189260749 -61427105 + FLAM_C SINE Alu 30 117 -26 449 217 0 0 chr2 189260858 189260941 -61426913 + FLAM_C SINE Alu 29 111 -32 763 206 0 2 chr2 189261008 189261240 -61426614 + AluJo SINE Alu 1 282 -30 227 130 0 22 chr2 189261256 189261302 -61426552 + (TA)n Simple_repeat Simple_repeat 1 45 0 978 179 6 0 chr2 189261507 189261669 -61426185 + AluJo SINE Alu 3 165 -147 1687 185 122 14 chr2 189261670 189262105 -61425749 + MLT1F LTR MaLR 73 542 0 199 196 43 0 chr2 189262115 189262161 -61425693 - MIR SINE MIR -150 112 65 487 275 15 0 chr2 189262186 189262317 -61425537 + MER94 DNA DNA 2 134 0 317 285 102 84 chr2 189262435 189262934 -61424920 + MLT1J LTR MaLR 4 511 0 271 323 61 76 chr2 189263738 189263866 -61423988 + L3 LINE CR1 1365 1490 -87 589 259 95 0 chr2 189263866 189264055 -61423799 + MER3 DNA MER1_type 3 209 0 271 323 61 76 chr2 189264055 189264124 -61423730 + L3 LINE CR1 1490 1559 -18 225 287 92 11 chr2 189265284 189265371 -61422483 - MIR SINE MIR -75 133 40 1396 159 45 12 chr2 189265928 189266173 -61421681 + AluJo SINE Alu 43 295 -17 510 301 88 35 chr2 189266187 189266572 -61421282 - MLT1K LTR MaLR -1 587 151 191 245 116 13 chr2 189268809 189268928 -61418926 + MER5B DNA MER1_type 3 130 -48 696 246 138 66 chr2 189268994 189269469 -61418385 - MLT1H LTR MaLR -4 545 14 825 176 16 36 chr2 189270661 189270854 -61417000 + MER53 DNA DNA 1 189 0 431 247 31 0 chr2 189271103 189271200 -61416654 - MER5A DNA MER1_type -76 113 14 808 211 6 28 chr2 189271219 189271399 -61416455 + MER5B DNA MER1_type 2 177 -1 2520 71 0 0 chr2 189271405 189271714 -61416140 + AluY SINE Alu 1 309 -2 265 149 0 0 chr2 189271866 189271913 -61415941 - L1MA3 LINE L1 0 6305 6259 948 176 6 0 chr2 189272805 189272964 -61414890 - AluSq SINE Alu -153 160 1 207 0 0 0 chr2 189273404 189273427 -61414427 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 668 160 0 25 chr2 189273636 189273755 -61414099 - AluJb SINE Alu -57 255 140 309 250 102 19 chr2 189273878 189273986 -61413868 - MIR SINE MIR -115 147 31 734 212 135 46 chr2 189274145 189274264 -61413590 - MER113 DNA MER1_type? -44 477 370 2013 86 79 4 chr2 189274264 189274543 -61413311 + AluSp SINE Alu 4 303 -10 734 212 135 46 chr2 189274543 189274749 -61413105 - MER113 DNA MER1_type? -151 370 123 251 288 0 0 chr2 189274778 189274844 -61413010 - MER113 DNA MER1_type? -446 75 10 232 299 113 10 chr2 189275097 189275194 -61412660 + MIR SINE MIR 54 160 -102 2004 155 0 3 chr2 189275194 189275504 -61412350 + AluJb SINE Alu 1 309 -3 5857 79 5 0 chr2 189276365 189277141 -61410713 - L1PA10 LINE L1 -4 6164 5385 2170 108 15 0 chr2 189277143 189277477 -61410377 + L1PA10 LINE L1 5032 5370 -776 12539 177 19 30 chr2 189277513 189278801 -61409053 - L1MA3 LINE L1 0 7724 6423 2207 91 7 10 chr2 189278801 189279098 -61408756 + AluSx SINE Alu 1 296 -16 12539 177 19 30 chr2 189279098 189281172 -61406682 - L1MA3 LINE L1 -1301 6423 4327 933 179 46 26 chr2 189281172 189281367 -61406487 - AluJo SINE Alu -27 285 87 12539 177 19 30 chr2 189281367 189282986 -61404868 - L1MA3 LINE L1 -3397 4327 2740 2119 131 3 3 chr2 189282986 189283299 -61404555 - AluSq SINE Alu 0 313 1 12539 177 19 30 chr2 189283299 189284459 -61403395 - L1MA3 LINE L1 -4984 2740 1568 357 43 0 0 chr2 189285551 189285598 -61402256 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1765 152 21 3 chr2 189285601 189285884 -61401970 - AluJb SINE Alu -24 288 1 325 304 2 22 chr2 189285924 189286035 -61401819 + MIR SINE MIR 21 130 -78 21 71 0 0 chr2 189286133 189286175 -61401679 + AT_rich Low_complexity Low_complexity 1 42 0 321 260 53 47 chr2 189286379 189286529 -61401325 - L1MEd LINE L1 -5671 448 298 280 343 22 7 chr2 189286736 189286873 -61400981 + MIR SINE MIR 124 262 0 11402 116 29 37 chr2 189287640 189289502 -61398352 + Tigger1 DNA MER2_type 2 1848 -570 585 42 0 0 chr2 189289505 189289577 -61398277 + (TA)n Simple_repeat Simple_repeat 2 73 0 523 216 7 13 chr2 189289623 189289776 -61398078 + GA-rich Low_complexity Low_complexity 3 154 0 181 258 32 16 chr2 189290311 189290373 -61397481 + L2 LINE L2 3171 3233 -80 197 32 0 32 chr2 189290527 189290558 -61397296 + (CAAAAA)n Simple_repeat Simple_repeat 6 35 0 345 278 193 87 chr2 189290558 189290993 -61396861 - MLT1K LTR MaLR -32 556 76 24 77 0 0 chr2 189291701 189291753 -61396101 + AT_rich Low_complexity Low_complexity 1 52 0 5976 104 0 7 chr2 189291972 189293140 -61394714 - L1PA13 LINE L1 0 6163 4991 414 0 0 0 chr2 189293218 189293264 -61394590 + (TG)n Simple_repeat Simple_repeat 2 47 0 180 77 0 0 chr2 189293439 189293465 -61394389 + (TTA)n Simple_repeat Simple_repeat 3 28 0 287 130 19 0 chr2 189293901 189293955 -61393899 + (CCCTA)n Simple_repeat Simple_repeat 1 55 0 430 216 134 62 chr2 189294721 189294915 -61392939 + MIR SINE MIR 29 236 -26 21 0 0 0 chr2 189295464 189295485 -61392369 + AT_rich Low_complexity Low_complexity 1 21 0 1400 153 3 61 chr2 189295732 189295783 -61392071 + L1MA4 LINE L1 6006 6058 -242 1659 149 35 17 chr2 189295783 189296072 -61391782 + AluJo SINE Alu 6 299 -13 1400 153 3 61 chr2 189296072 189296333 -61391521 + L1MA4 LINE L1 6058 6300 0 1974 167 85 0 chr2 189296352 189296717 -61391137 + MSTD LTR MaLR 1 396 0 1675 197 94 50 chr2 189297106 189297604 -61390250 - MLT2B1 LTR ERVL 0 520 1 219 288 30 0 chr2 189297604 189297670 -61390184 - L2 LINE L2 -940 2374 2307 259 238 0 60 chr2 189297702 189297786 -61390068 - MLT1K LTR MaLR -476 79 1 337 284 166 24 chr2 189297791 189297960 -61389894 + MIR SINE MIR 66 258 -4 483 247 87 27 chr2 189297988 189298262 -61389592 + MIR SINE MIR 51 262 0 712 198 0 0 chr2 189298516 189298637 -61389217 - FLAM_C SINE Alu -16 127 7 242 338 137 39 chr2 189298749 189299544 -61388310 - L2 LINE L2 -1209 2105 1233 717 260 56 0 chr2 189300040 189300236 -61387618 + MIR SINE MIR 56 262 0 842 304 65 20 chr2 189300716 189301174 -61386680 - L1MC/D LINE L1 -2075 5733 5255 184 333 0 0 chr2 189302299 189302350 -61385504 + MIR3 SINE MIR 144 194 -14 2178 118 3 7 chr2 189302372 189302678 -61385176 + AluSq SINE Alu 1 305 -8 2326 84 10 0 chr2 189302679 189302976 -61384878 + AluY SINE Alu 1 300 -11 24 32 0 0 chr2 189303167 189303198 -61384656 + AT_rich Low_complexity Low_complexity 1 31 0 295 286 0 151 chr2 189303306 189303399 -61384455 - L2 LINE L2 -208 3064 3015 2273 107 7 0 chr2 189303399 189303698 -61384156 + AluSx SINE Alu 1 301 -11 295 286 0 151 chr2 189303698 189303803 -61384051 - L2 LINE L2 -257 3015 2896 268 154 0 0 chr2 189303942 189303981 -61383873 - MIR SINE MIR -35 227 189 371 283 176 19 chr2 189304346 189304551 -61383303 - MIR SINE MIR -18 244 8 1458 129 51 39 chr2 189305192 189305596 -61382258 + L1MC1 LINE L1 1398 1896 -4530 2252 117 10 0 chr2 189305596 189305904 -61381950 + AluSx SINE Alu 1 311 -1 1458 129 51 39 chr2 189305904 189306022 -61381832 + L1MC1 LINE L1 1896 2011 -4415 * 4867 221 23 51 chr2 189306020 189306235 -61381619 + L1MC1 LINE L1 4029 4248 -2178 2375 103 0 0 chr2 189306235 189306545 -61381309 + AluSg SINE Alu 1 310 0 4867 221 23 51 chr2 189306545 189306977 -61380877 + L1MC1 LINE L1 4248 4690 -1736 1868 139 36 3 chr2 189306977 189307279 -61380575 + AluSq SINE Alu 1 312 -1 4867 221 23 51 chr2 189307279 189307884 -61379970 + L1MC1 LINE L1 4690 5235 -1191 270 81 0 0 chr2 189307884 189307921 -61379933 + (TA)n Simple_repeat Simple_repeat 2 38 0 4867 221 23 51 chr2 189307921 189308183 -61379671 + L1MC1 LINE L1 5235 5503 -923 1105 117 43 0 chr2 189308167 189308329 -61379525 + L1MC1 LINE L1 5783 5951 -673 * 1090 59 0 0 chr2 189308329 189308464 -61379390 + AluYa5/8 SINE Alu 174 308 -3 3872 123 8 75 chr2 189308467 189308903 -61378951 + L1MC1 LINE L1 5943 6314 -299 1437 171 54 29 chr2 189308903 189309183 -61378671 + AluJo SINE Alu 1 287 -25 3872 123 8 75 chr2 189309183 189309464 -61378390 + L1MC1 LINE L1 6314 6612 -1 2730 268 135 43 chr2 189309491 189310588 -61377266 + L2 LINE L2 1700 2897 -417 399 74 0 0 chr2 189310614 189310668 -61377186 + MADE1 DNA Mariner 1 54 -26 197 238 32 0 chr2 189310768 189310831 -61377023 + L2 LINE L2 1566 1630 -1684 395 268 141 10 chr2 189311254 189311452 -61376402 - MIR SINE MIR -37 225 2 1632 138 29 33 chr2 189313533 189313808 -61374046 + AluJb SINE Alu 1 274 -38 336 24 0 0 chr2 189313811 189313852 -61374002 + (TC)n Simple_repeat Simple_repeat 1 41 0 * 459 0 0 0 chr2 189313851 189313902 -61373952 + (CA)n Simple_repeat Simple_repeat 1 51 0 530 343 144 31 chr2 189314699 189315087 -61372767 + L2 LINE L2 2840 3271 -1 201 39 0 0 chr2 189315159 189315185 -61372669 + (CAA)n Simple_repeat Simple_repeat 2 27 0 845 254 42 0 chr2 189315740 189315957 -61371897 + MIR SINE MIR 23 248 -14 24 91 0 0 chr2 189316144 189316210 -61371644 + AT_rich Low_complexity Low_complexity 1 66 0 510 135 0 22 chr2 189316616 189316705 -61371149 + L1MB2 LINE L1 3829 3915 -2231 608 156 21 0 chr2 189316714 189316810 -61371044 - FRAM SINE Alu -19 157 60 228 191 32 0 chr2 189316812 189316875 -61370979 + L1MB2 LINE L1 3912 3976 -2170 5381 180 33 24 chr2 189316879 189317096 -61370758 + L1MB2 LINE L1 4114 4328 -1843 2463 83 3 0 chr2 189317096 189317408 -61370446 - AluSp SINE Alu 0 313 1 5381 180 33 24 chr2 189317408 189317704 -61370150 + L1MB2 LINE L1 4328 4620 -1551 554 252 24 0 chr2 189317704 189317831 -61370023 + FLAM_A SINE Alu 1 130 -3 5381 180 33 24 chr2 189317831 189319347 -61368507 + L1MB2 LINE L1 4620 6157 -14 908 207 75 5 chr2 189319513 189319726 -61368128 - AluJb SINE Alu -53 259 32 1476 201 7 32 chr2 189319726 189320009 -61367845 - AluJo SINE Alu -36 276 1 2195 105 10 3 chr2 189320034 189320339 -61367515 + AluSx SINE Alu 1 307 -5 400 241 0 28 chr2 189320339 189320447 -61367407 - L1MC4a LINE L1 -1932 5876 5772 36 23 0 0 chr2 189320509 189320552 -61367302 + AT_rich Low_complexity Low_complexity 1 43 0 1791 156 7 3 chr2 189320869 189321175 -61366679 + AluSx SINE Alu 1 307 0 297 263 81 0 chr2 189321267 189321366 -61366488 - MIR SINE MIR -55 207 101 359 199 7 149 chr2 189321619 189321760 -61366094 - MER94 DNA DNA -4 130 10 196 292 208 15 chr2 189321936 189322138 -61365716 - L2 LINE L2 -925 2389 2149 1811 137 39 3 chr2 189322817 189323101 -61364753 + AluSx SINE Alu 1 294 -18 5140 133 55 13 chr2 189323647 189324491 -61363363 - LTR5 LTR ERVK -90 879 1 661 55 44 0 chr2 189324491 189324582 -61363272 - HERVK LTR ERVK 0 7243 7149 490 92 0 26 chr2 189324785 189324861 -61362993 - HERVK LTR ERVK -1706 5537 5464 775 77 10 0 chr2 189324863 189324967 -61362887 - HERVK LTR ERVK -7138 105 1 695 137 55 27 chr2 189324967 189325113 -61362741 - LTR5 LTR ERVK 0 969 820 410 236 157 16 chr2 189326156 189326347 -61361507 + L1ME1 LINE L1 3016 3233 -2913 361 175 138 12 chr2 189326372 189326452 -61361402 - LOR1a LTR ERV1 -407 90 1 1613 233 106 93 chr2 189326471 189326901 -61360953 + L1ME1 LINE L1 3692 4115 -2031 429 167 14 0 chr2 189326901 189326973 -61360881 - MER58 DNA MER1_type -2144 276 204 1613 233 106 93 chr2 189326973 189327309 -61360545 + L1ME1 LINE L1 4115 4445 -1701 2141 144 25 3 chr2 189327309 189327676 -61360178 - THE1C LTR MaLR 0 375 1 1613 233 106 93 chr2 189327676 189328140 -61359714 + L1ME1 LINE L1 4445 5020 -1126 * 1946 212 112 37 chr2 189328130 189328176 -61359678 + L1ME1 LINE L1 5468 5509 -657 1737 147 25 14 chr2 189328176 189328462 -61359392 - AluSx SINE Alu -23 289 1 1946 212 112 37 chr2 189328462 189329057 -61358797 + L1ME1 LINE L1 5509 6157 -9 23 0 0 0 chr2 189329649 189329672 -61358182 + AT_rich Low_complexity Low_complexity 1 23 0 2832 16 0 0 chr2 189331019 189331331 -61356523 - AluYb8 SINE Alu -6 312 1 916 138 110 0 chr2 189331334 189331479 -61356375 - FRAM SINE Alu -8 168 8 31 26 0 0 chr2 189331585 189331623 -61356231 + AT_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr2 189332029 189332063 -61355791 + AT_rich Low_complexity Low_complexity 1 34 0 837 226 6 6 chr2 189332277 189332445 -61355409 - FAM SINE Alu -7 168 1 1691 152 79 21 chr2 189334194 189334523 -61353331 - MER7A DNA MER2_type 0 346 1 1297 115 78 23 chr2 189335043 189335261 -61352593 + MER30 DNA MER1_type 1 230 0 22 35 0 0 chr2 189335462 189335491 -61352363 + AT_rich Low_complexity Low_complexity 1 29 0 2382 94 0 0 chr2 189335699 189335997 -61351857 - AluSx SINE Alu -14 298 1 278 339 131 15 chr2 189335997 189336127 -61351727 - MIR3 SINE MIR -43 165 21 232 254 0 0 chr2 189339067 189339122 -61348732 + Charlie8 DNA MER1_type 2363 2417 0 805 161 8 0 chr2 189339428 189339558 -61348296 + FLAM_C SINE Alu 1 131 -2 457 226 172 59 chr2 189339908 189340112 -61347742 - MIR SINE MIR -21 241 15 24 0 0 0 chr2 189340852 189340876 -61346978 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr2 189340933 189340958 -61346896 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2137 113 0 13 chr2 189342340 189342641 -61345213 + AluSq SINE Alu 1 297 -16 1447 174 12 72 chr2 189343631 189343952 -61343902 - AluJb SINE Alu -10 302 1 2121 108 3 7 chr2 189344010 189344307 -61343547 + AluSc SINE Alu 1 296 -13 24 0 0 70 chr2 189344447 189344490 -61343364 + AT_rich Low_complexity Low_complexity 1 40 0 2113 133 0 0 chr2 189345046 189345355 -61342499 + AluSc SINE Alu 1 309 0 196 275 0 0 chr2 189346057 189346097 -61341757 - L2 LINE L2 -11 3302 3263 224 353 88 10 chr2 189346387 189346489 -61341365 - L2 LINE L2 -36 3236 3127 386 341 158 29 chr2 189346886 189347399 -61340455 - L2 LINE L2 -785 2529 1951 1080 221 72 15 chr2 189347514 189347777 -61340077 - MER115 DNA AcHobo 0 693 416 327 294 135 16 chr2 189347989 189348115 -61339739 - MER115 DNA AcHobo -551 142 2 418 55 0 0 chr2 189348548 189348603 -61339251 - AluS SINE Alu -244 69 15 1977 150 42 3 chr2 189349100 189349434 -61338420 + MER7A DNA MER2_type 1 345 -1 1505 176 55 0 chr2 189349519 189349774 -61338080 + AluSg SINE Alu 3 271 -39 244 333 28 35 chr2 189350206 189350350 -61337504 + L1ME2 LINE L1 5527 5669 -495 28 0 0 0 chr2 189351018 189351046 -61336808 + AT_rich Low_complexity Low_complexity 1 28 0 2448 31 10 0 chr2 189351046 189351338 -61336516 - L1PA5 LINE L1 -7 6147 5853 193 311 0 0 chr2 189351827 189351872 -61335982 - MIR SINE MIR 0 262 218 239 67 0 0 chr2 189351874 189351904 -61335950 - HAL1 LINE L1 -1653 854 825 1428 176 134 35 chr2 189352027 189352452 -61335402 + MLT1C LTR MaLR 1 467 0 282 305 160 52 chr2 189352455 189353016 -61334838 - HAL1 LINE L1 -1731 776 155 395 245 278 7 chr2 189354330 189354481 -61333373 + MIR SINE MIR 4 195 -67 606 242 96 6 chr2 189354491 189354669 -61333185 + MIR SINE MIR 11 204 -58 205 250 42 21 chr2 189354745 189354793 -61333061 - MIR SINE MIR -180 82 34 524 266 181 26 chr2 189356038 189356264 -61331590 - MIR SINE MIR 0 262 2 1126 259 52 14 chr2 189357482 189357845 -61330009 + L1ME2 LINE L1 5788 6164 0 28 0 0 0 chr2 189357845 189357873 -61329981 + AT_rich Low_complexity Low_complexity 1 28 0 270 256 0 0 chr2 189358817 189358895 -61328959 + (CATA)n Simple_repeat Simple_repeat 2 79 0 484 300 121 5 chr2 189360458 189360648 -61327206 - MIR SINE MIR -18 244 33 1192 137 6 0 chr2 189362342 189362525 -61325329 + MLT1B LTR MaLR 207 390 0 191 340 121 24 chr2 189363296 189363502 -61324352 + L2 LINE L2 2422 2647 -667 32 0 0 0 chr2 189364131 189364163 -61323691 + AT_rich Low_complexity Low_complexity 1 32 0 622 337 40 4 chr2 189364368 189364617 -61323237 + MIR SINE MIR 5 262 0 573 280 90 59 chr2 189365393 189365747 -61322107 + L2 LINE L2 2947 3311 -2 1812 152 17 0 chr2 189365755 189366044 -61321810 + AluSx SINE Alu 1 294 -18 957 323 114 29 chr2 189366789 189367661 -61320193 - L2 LINE L2 -210 3062 2112 830 214 87 10 chr2 189367680 189367876 -61319978 + MLT1F1 LTR MaLR 1 211 -356 1383 195 5 146 chr2 189367887 189368217 -61319637 + MLT1F1 LTR MaLR 177 552 -15 203 0 93 23 chr2 189368217 189368260 -61319594 + T-rich Low_complexity Low_complexity 4 49 0 12723 27 3 1 chr2 189368260 189370521 -61317333 - L1PA3 LINE L1 -16 6139 3877 1383 195 5 146 chr2 189370521 189370599 -61317255 + MLT1F1 LTR MaLR 441 528 -39 2096 128 0 0 chr2 189370624 189370913 -61316941 - AluSq SINE Alu -24 289 1 5265 134 13 0 chr2 189370924 189371753 -61316101 - L1PA14 LINE L1 -5 6156 5317 2375 105 21 8 chr2 189371809 189372189 -61315665 - SVA Other Other -4 1382 998 830 181 22 16 chr2 189372303 189372485 -61315369 - MSTB LTR MaLR -239 187 5 255 371 21 14 chr2 189372915 189373055 -61314799 + L2 LINE L2 2597 2737 -577 214 232 159 0 chr2 189373113 189373182 -61314672 + MIR SINE MIR 183 262 0 338 0 24 0 chr2 189373298 189373340 -61314514 + (CA)n Simple_repeat Simple_repeat 1 43 0 376 330 97 40 chr2 189373469 189373645 -61314209 + L2 LINE L2 3086 3271 -1 23 68 0 0 chr2 189374077 189374121 -61313733 + GC_rich Low_complexity Low_complexity 1 44 0 261 163 0 0 chr2 189374453 189374502 -61313352 + (CAG)n Simple_repeat Simple_repeat 1 49 0 414 0 0 0 chr2 189374902 189374948 -61312906 + (CA)n Simple_repeat Simple_repeat 2 47 0 23 0 0 0 chr2 189375090 189375113 -61312741 + AT_rich Low_complexity Low_complexity 1 23 0 799 299 105 18 chr2 189376544 189377146 -61310708 + L2 LINE L2 2630 3300 -13 459 92 0 0 chr2 189377146 189377211 -61310643 + (TGGA)n Simple_repeat Simple_repeat 1 65 0 1047 171 159 52 chr2 189377443 189377694 -61310160 - AluJo SINE Alu -22 290 13 372 248 33 25 chr2 189378524 189378645 -61309209 - L1MC5 LINE L1 -50 7911 7790 6738 119 27 6 chr2 189378667 189380383 -61307471 - L1MA3 LINE L1 0 6305 4554 1933 193 82 20 chr2 189380419 189380922 -61306932 - L1ME2 LINE L1 -12 6152 5619 1972 149 0 14 chr2 189381078 189381374 -61306480 - AluSx SINE Alu -20 292 1 1137 203 55 7 chr2 189381386 189381677 -61306177 - L1MA9 LINE L1 -36 6276 5972 1851 152 48 9 chr2 189382236 189382552 -61305302 - MER7A DNA MER2_type 0 346 21 225 0 0 0 chr2 189383230 189383255 -61304599 + (CA)n Simple_repeat Simple_repeat 2 26 0 1095 135 0 0 chr2 189383260 189383416 -61304438 - AluSg/x SINE Alu -39 271 116 24 32 0 0 chr2 189384470 189384501 -61303353 + AT_rich Low_complexity Low_complexity 1 31 0 2219 154 62 38 chr2 189385121 189385570 -61302284 - MER66B LTR ERV1 0 486 27 29 47 0 0 chr2 189387015 189387058 -61300796 + AT_rich Low_complexity Low_complexity 1 43 0 655 336 141 34 chr2 189387160 189387896 -61299958 + L2 LINE L2 2155 2969 -345 24 0 0 0 chr2 189387984 189388008 -61299846 + AT_rich Low_complexity Low_complexity 1 24 0 202 307 102 49 chr2 189388522 189388727 -61299127 - L2 LINE L2 -9 3304 3089 543 200 27 92 chr2 189388835 189389050 -61298804 + L1MEc LINE L1 2498 2649 -3891 2190 161 74 0 chr2 189389050 189389442 -61298412 - MSTA LTR MaLR 0 428 8 227 259 71 0 chr2 189390938 189391023 -61296831 - L1MC4 LINE L1 -27 8015 7925 204 40 0 0 chr2 189391038 189391063 -61296791 + (CA)n Simple_repeat Simple_repeat 2 26 0 231 246 33 0 chr2 189391810 189391871 -61295983 + MLT1K LTR MaLR 522 584 -4 306 219 135 10 chr2 189392520 189392616 -61295238 + L2 LINE L2 3180 3287 -26 1800 172 0 7 chr2 189395361 189395658 -61292196 - AluJo SINE Alu -17 295 1 1487 164 0 4 chr2 189396237 189396468 -61291386 - AluJo SINE Alu -82 230 1 309 317 90 31 chr2 189396608 189396963 -61290891 - L1MC4a LINE L1 -532 5639 5531 594 253 30 66 chr2 189397047 189397245 -61290609 - MIR SINE MIR -36 226 36 29 28 0 0 chr2 189397377 189397413 -61290441 + AT_rich Low_complexity Low_complexity 1 36 0 284 333 98 83 chr2 189397701 189398158 -61289696 + L2 LINE L2 2809 3272 0 21 57 0 0 chr2 189398918 189398953 -61288901 + AT_rich Low_complexity Low_complexity 1 35 0 312 313 83 5 chr2 189399861 189400053 -61287801 + L1ME4a LINE L1 5527 5733 -388 2277 108 0 0 chr2 189400196 189400492 -61287362 - AluSx SINE Alu -16 296 1 248 230 69 11 chr2 189400767 189400854 -61287000 + L1ME4a LINE L1 6006 6097 -24 237 119 0 0 chr2 189400855 189400897 -61286957 + (A)n Simple_repeat Simple_repeat 1 42 0 650 187 39 60 chr2 189401292 189401474 -61286380 - MER5B DNA MER1_type 0 178 1 261 233 17 17 chr2 189401863 189401923 -61285931 + L2 LINE L2 3234 3293 -20 318 196 0 0 chr2 189401949 189402005 -61285849 - MER119 DNA MER1_type 0 583 528 1219 268 79 12 chr2 189402052 189402395 -61285459 - MER119 DNA MER1_type -215 368 3 6494 62 31 47 chr2 189402653 189404625 -61283229 - SVA Other Other -520 1374 9 4772 165 6 9 chr2 189404625 189404908 -61282946 - L1P LINE L1 -814 5332 5050 2074 130 61 9 chr2 189404908 189405253 -61282601 + THE1B LTR MaLR 1 363 -1 4772 165 6 9 chr2 189405253 189405853 -61282001 - L1P LINE L1 -1096 5050 4452 381 175 4 42 chr2 189405855 189405964 -61281890 + MLT1F LTR MaLR 406 542 0 22 0 0 0 chr2 189406779 189406801 -61281053 + AT_rich Low_complexity Low_complexity 1 22 0 218 297 195 31 chr2 189407620 189407748 -61280106 - MIR SINE MIR -102 160 12 250 355 78 69 chr2 189408524 189408741 -61279113 + L2 LINE L2 3054 3272 0 882 227 26 73 chr2 189408764 189408878 -61278976 - MLT1E1 LTR MaLR 0 593 475 2247 104 0 13 chr2 189408878 189409185 -61278669 + AluY SINE Alu 9 311 0 882 227 26 73 chr2 189409185 189409343 -61278511 - MLT1E1 LTR MaLR -118 475 334 1175 142 30 82 chr2 189409357 189409688 -61278166 + Charlie1 DNA MER1_type 2448 2761 0 1352 149 63 103 chr2 189409843 189410192 -61277662 - MLT1A1 LTR MaLR -1 364 30 1238 236 121 22 chr2 189410347 189410711 -61277143 - MER63B DNA MER1_type -19 417 18 2638 128 23 37 chr2 189411179 189411609 -61276245 - MSTC LTR MaLR -4 424 1 904 203 58 10 chr2 189411824 189412031 -61275823 - MLT2C1 LTR ERVL -2 395 179 3674 136 7 0 chr2 189412228 189412801 -61275053 - L1PB3 LINE L1 0 6154 5578 1287 175 140 14 chr2 189414470 189414756 -61273098 - MLT1E1 LTR MaLR -291 363 42 1147 162 102 36 chr2 189414877 189415180 -61272674 - MER33 DNA MER1_type 0 324 2 6559 81 17 1 chr2 189415202 189416168 -61271686 - L1PA14 LINE L1 -2 6159 5170 21 0 0 0 chr2 189417951 189417972 -61269882 + AT_rich Low_complexity Low_complexity 1 21 0 2598 197 92 12 chr2 189418395 189418973 -61268881 - MLT1E3 LTR MaLR 0 624 1 1408 192 13 45 chr2 189419806 189420114 -61267740 - AluJb SINE Alu -14 298 1 297 281 24 24 chr2 189420615 189420697 -61267157 - L2 LINE L2 -4 3309 3228 21 57 0 0 chr2 189420794 189420829 -61267025 + AT_rich Low_complexity Low_complexity 1 35 0 350 377 121 31 chr2 189421263 189421818 -61266036 - L2 LINE L2 -508 2806 2202 1975 116 72 3 chr2 189422125 189422417 -61265437 + AluSx SINE Alu 1 312 0 1589 173 51 17 chr2 189422473 189422768 -61265086 - AluJo SINE Alu -6 306 2 324 256 22 78 chr2 189423131 189423311 -61264543 + MER112 DNA MER1_type 80 249 -11 188 339 113 53 chr2 189424068 189424581 -61263273 + L2 LINE L2 1833 2376 -938 275 98 176 0 chr2 189424752 189424803 -61263051 - LTR33A LTR ERVL -20 503 444 910 299 63 6 chr2 189425013 189425361 -61262493 + LTR16C LTR ERVL 84 451 -40 2051 150 7 0 chr2 189426119 189426425 -61261429 - AluSx SINE Alu -4 308 1 12866 76 28 6 chr2 189426703 189428564 -61259290 - HERVL LTR ERVL -229 5425 3525 11693 29 5 2 chr2 189428853 189430834 -61257020 - L1PA4 LINE L1 -254 5901 3919 345 24 0 0 chr2 189430934 189430976 -61256878 + (CA)n Simple_repeat Simple_repeat 1 42 0 264 252 58 90 chr2 189432059 189432214 -61255640 - L2 LINE L2 0 3313 3164 228 67 0 0 chr2 189432248 189432278 -61255576 + (TA)n Simple_repeat Simple_repeat 1 30 0 24 32 0 0 chr2 189432451 189432482 -61255372 + GC_rich Low_complexity Low_complexity 1 31 0 1132 142 38 50 chr2 189432616 189432856 -61254998 + L1MB5 LINE L1 5928 6164 -10 1745 127 39 15 chr2 189432972 189433231 -61254623 + AluSq SINE Alu 1 265 -48 5087 211 73 16 chr2 189433292 189434667 -61253187 + Charlie1a DNA MER1_type 3 1455 0 365 241 68 0 chr2 189435241 189435403 -61252451 - Charlie2 DNA MER1_type -781 2081 1909 5407 200 9 30 chr2 189435412 189437581 -61250273 - L1PA15 LINE L1 -1 6164 4018 2433 110 6 3 chr2 189437714 189438070 -61249784 - HERVL18 LTR ERVL -2276 3771 3415 401 189 0 14 chr2 189438075 189438149 -61249705 + HERVL18 LTR ERVL 2630 2702 -3345 * 19071 183 8 5 chr2 189438148 189441545 -61246309 - HERVL18 LTR ERVL -2631 3416 9 2351 130 53 0 chr2 189441559 189441898 -61245956 - LTR18A LTR ERVL 0 357 1 1553 138 0 0 chr2 189441898 189442116 -61245738 - AluSx SINE Alu -94 218 1 2548 112 8 8 chr2 189442179 189442554 -61245300 + THE1C LTR MaLR 1 375 0 613 266 44 11 chr2 189443398 189443657 -61244197 + L1MD3 LINE L1 6098 7986 -9 1183 137 0 0 chr2 189444607 189444790 -61243064 + Tigger3(Golem) DNA MER2_type 2846 3028 -1 230 343 20 0 chr2 189444806 189444905 -61242949 - MARNA DNA Mariner -51 535 435 853 155 7 7 chr2 189444958 189445113 -61242741 - L1MB1 LINE L1 -3 6165 6011 1792 141 3 24 chr2 189445220 189445510 -61242344 - AluSx SINE Alu -28 284 1 675 250 28 4 chr2 189446150 189446398 -61241456 + L1M4 LINE L1 5043 5296 -850 * 1206 209 72 21 chr2 189446396 189446784 -61241070 - L1M4 LINE L1 -1123 5023 4616 468 319 28 20 chr2 189446782 189447033 -61240821 - L1MEc LINE L1 -6107 289 37 * 1803 167 17 3 chr2 189447697 189447996 -61239858 - AluJo SINE Alu -9 303 1 428 333 42 18 chr2 189448686 189448851 -61239003 - L2 LINE L2 0 3272 3104 1732 239 56 19 chr2 189449386 189449904 -61237950 - MLT1F LTR MaLR -5 537 1 2058 129 50 19 chr2 189450680 189451044 -61236810 - THE1C LTR MaLR 0 375 1 276 373 57 0 chr2 189451716 189451909 -61235945 + MIR SINE MIR 53 256 -6 22 35 0 0 chr2 189452112 189452141 -61235713 + AT_rich Low_complexity Low_complexity 1 29 0 406 162 81 50 chr2 189453701 189453800 -61234054 - L1MB3 LINE L1 -344 5839 5738 1315 31 12 0 chr2 189453817 189453977 -61233877 - L1PA4 LINE L1 -2 6153 5992 1238 236 119 10 chr2 189454042 189454445 -61233409 + LTR2 LTR ERV1 3 449 0 875 200 6 11 chr2 189454539 189454714 -61233140 + MER5B DNA MER1_type 3 176 -2 375 168 0 21 chr2 189455927 189455981 -61231873 - AluSg/x SINE Alu -35 267 236 2140 144 56 3 chr2 189455981 189456320 -61231534 - LTR18A LTR ERVL 0 357 1 375 168 0 21 chr2 189456320 189456348 -61231506 - AluSg/x SINE Alu -66 236 209 10899 162 22 11 chr2 189456354 189458270 -61229584 - HERVL18 LTR ERVL -33 6014 4077 16983 46 6 2 chr2 189458431 189461410 -61226444 + L1PA4 LINE L1 3189 6153 -2 21 0 0 0 chr2 189461480 189461501 -61226353 + AT_rich Low_complexity Low_complexity 1 21 0 13237 166 16 33 chr2 189461501 189462508 -61225346 + L1MA1 LINE L1 3330 4353 -3368 6856 33 27 1 chr2 189462508 189463334 -61224520 + L1PA5 LINE L1 5282 6150 -4 13237 166 16 33 chr2 189463334 189463347 -61224507 + L1MA1 LINE L1 4353 4365 -3356 1765 100 0 25 chr2 189463347 189463586 -61224268 + AluY SINE Alu 71 303 -8 13237 166 16 33 chr2 189463586 189465040 -61222814 + L1MA1 LINE L1 4365 5843 -1878 2212 103 10 6 chr2 189465040 189465352 -61222502 - AluSq SINE Alu 0 313 1 13237 166 16 33 chr2 189465352 189466715 -61221139 + L1MA1 LINE L1 5843 7080 -641 1963 119 7 0 chr2 189466715 189466984 -61220870 + AluSg SINE Alu 1 271 -39 13237 166 16 33 chr2 189466984 189467609 -61220245 + L1MA1 LINE L1 7080 7714 -7 418 248 30 59 chr2 189468161 189468465 -61219389 + MER39 LTR ERV1 1 483 -224 2237 188 75 11 chr2 189468466 189469078 -61218776 + MER39 LTR ERV1 1 530 -12 528 191 156 35 chr2 189469072 189469245 -61218609 + MER39 LTR ERV1 487 680 -27 * 293 277 12 12 chr2 189469676 189469759 -61218095 + L2 LINE L2 3228 3310 -3 1087 241 85 19 chr2 189470207 189470572 -61217282 + MER67C LTR ERV1 1 389 -321 650 213 0 15 chr2 189470569 189470705 -61217149 + MER67C LTR ERV1 498 631 -79 * 3080 136 30 2 chr2 189470705 189471214 -61216640 - LTR45 LTR ERV1 -2 523 1 22 0 0 0 chr2 189471295 189471317 -61216537 + AT_rich Low_complexity Low_complexity 1 22 0 1181 187 42 103 chr2 189471959 189472000 -61215854 + MER67D LTR ERV1 1 43 -471 2379 78 3 0 chr2 189472000 189472295 -61215559 - AluSp SINE Alu -16 297 2 1181 187 42 103 chr2 189472295 189472584 -61215270 + MER67D LTR ERV1 43 311 -203 590 209 77 66 chr2 189472647 189472843 -61215011 + MER67D LTR ERV1 316 513 -1 355 221 16 16 chr2 189472942 189473064 -61214790 + (TA)n Simple_repeat Simple_repeat 1 122 0 26 50 0 0 chr2 189473420 189473460 -61214394 + AT_rich Low_complexity Low_complexity 1 40 0 504 329 65 38 chr2 189474025 189474396 -61213458 + L2 LINE L2 2933 3313 0 186 346 0 0 chr2 189474415 189474467 -61213387 + MIR SINE MIR 46 97 -165 36 0 0 0 chr2 189474478 189474514 -61213340 + AT_rich Low_complexity Low_complexity 1 36 0 31 26 0 0 chr2 189474882 189474920 -61212934 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr2 189475124 189475153 -61212701 + AT_rich Low_complexity Low_complexity 1 29 0 1667 35 5 0 chr2 189475222 189475425 -61212429 - L1PA5 LINE L1 -11 6143 5940 390 292 0 0 chr2 189475726 189475815 -61212039 + MER5A DNA MER1_type 16 104 -85 217 308 9 65 chr2 189475896 189476003 -61211851 - L2 LINE L2 -657 2657 2557 531 215 12 99 chr2 189476012 189476184 -61211670 - MER5B DNA MER1_type -18 160 4 312 250 80 0 chr2 189477051 189477139 -61210715 - MIR SINE MIR -18 244 150 223 330 21 72 chr2 189477464 189477576 -61210278 + L2 LINE L2 2896 2995 -277 1997 197 93 37 chr2 189477576 189478068 -61209786 - MLT2B1 LTR ERVL 0 520 1 223 330 21 72 chr2 189478068 189478149 -61209705 + L2 LINE L2 2995 3079 -193 440 270 71 61 chr2 189478178 189478545 -61209309 + MLT1J1 LTR MaLR 20 446 0 632 251 129 30 chr2 189478758 189479029 -61208825 + LTR16C LTR ERVL 194 491 0 779 208 83 29 chr2 189479116 189479336 -61208518 + MLT1E1 LTR MaLR 1 237 -356 26 30 0 0 chr2 189479342 189479375 -61208479 + AT_rich Low_complexity Low_complexity 1 33 0 1113 164 77 0 chr2 189479407 189479627 -61208227 + MLT1E1 LTR MaLR 418 654 0 248 185 77 0 chr2 189480074 189480139 -61207715 + MLT1J2 LTR MaLR 69 138 -312 265 280 45 45 chr2 189480165 189480297 -61207557 + MLT1J2 LTR MaLR 266 397 -53 305 247 146 38 chr2 189480427 189480585 -61207269 - L1MEc LINE L1 -3840 2289 2115 255 336 118 11 chr2 189480837 189481108 -61206746 - L1MEc LINE L1 -4693 1617 1318 334 308 158 44 chr2 189481212 189481485 -61206369 - L1MEc LINE L1 -4971 1148 845 2704 181 20 21 chr2 189481683 189482242 -61205612 - L1MB5 LINE L1 0 6174 5617 3272 148 80 70 chr2 189482259 189482592 -61205262 - L1MC3 LINE L1 -8 7777 7449 4349 149 29 13 chr2 189482592 189483388 -61204466 - L1MA7 LINE L1 0 6291 5483 3272 148 80 70 chr2 189483388 189483479 -61204375 - L1MC3 LINE L1 -336 7449 7360 1702 174 3 7 chr2 189483479 189483781 -61204073 - AluJo SINE Alu 0 301 1 3272 148 80 70 chr2 189483781 189484090 -61203764 - L1MC3 LINE L1 -425 7360 7031 189 0 0 0 chr2 189484090 189484111 -61203743 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 3272 148 80 70 chr2 189484111 189484212 -61203642 - L1MC3 LINE L1 -754 7031 6932 536 271 32 7 chr2 189485280 189485435 -61202419 + MIR SINE MIR 34 192 -70 237 204 56 37 chr2 189485555 189485609 -61202245 - MIR SINE MIR -63 145 91 270 0 0 0 chr2 189485609 189485639 -61202215 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 401 258 215 16 chr2 189486283 189486469 -61201385 - MLT1F LTR MaLR -120 422 200 2216 90 7 7 chr2 189486516 189486816 -61201038 - AluSc SINE Alu -7 302 3 3110 78 12 76 chr2 189487152 189487636 -61200218 + MLT2A2 LTR ERVL 1 453 0 20073 74 14 5 chr2 189487636 189490249 -61197605 + HERVL-A2 LTR ERVL 1 2637 -3017 1373 43 6 0 chr2 189490248 189490411 -61197443 + HERVL-A2 LTR ERVL 3291 3454 -2200 * 713 43 11 0 chr2 189490516 189490608 -61197246 + HERVL-A2 LTR ERVL 5562 5654 0 3101 125 11 2 chr2 189490608 189491057 -61196797 + MLT2A2 LTR ERVL 1 453 0 511 275 30 0 chr2 189491220 189491351 -61196503 + L2 LINE L2 3179 3313 0 187 308 55 11 chr2 189491425 189491516 -61196338 - MIR SINE MIR -6 256 162 374 318 31 8 chr2 189492756 189492885 -61194969 + MIR3 SINE MIR 15 146 -62 220 269 0 0 chr2 189493106 189493158 -61194696 + MIR3 SINE MIR 156 207 -1 4808 289 139 31 chr2 189493214 189495625 -61192229 - L2 LINE L2 0 3313 640 562 251 16 33 chr2 189496093 189496276 -61191578 - L1 LINE L1 -1349 4797 4618 2201 171 20 47 chr2 189496284 189496794 -61191060 + L1MB1 LINE L1 5670 6165 -3 290 349 70 0 chr2 189497078 189497207 -61190647 - MIR3 SINE MIR -27 181 44 1550 42 0 0 chr2 189497455 189497646 -61190208 - L1PA2 LINE L1 -4 6151 5961 6070 20 0 1 chr2 189497646 189498898 -61188956 + L1PA2 LINE L1 4708 5960 -195 680 299 40 90 chr2 189499956 189500425 -61187429 - MLT1J LTR MaLR -14 497 52 22 0 0 0 chr2 189500864 189500886 -61186968 + AT_rich Low_complexity Low_complexity 1 22 0 2704 206 8 28 chr2 189500902 189501674 -61186180 + L1MB5 LINE L1 5128 5880 -294 * 7605 51 2 1 chr2 189501672 189502652 -61185202 + L1P LINE L1 2955 3935 -2211 6695 220 15 27 chr2 189502792 189504540 -61183314 - L1P LINE L1 -1984 4162 2435 1007 188 0 0 chr2 189504576 189504736 -61183118 - FRAM SINE Alu -22 154 1 183 42 0 0 chr2 189505568 189505592 -61182262 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 26 0 0 0 chr2 189505917 189505943 -61181911 + AT_rich Low_complexity Low_complexity 1 26 0 330 108 0 62 chr2 189505973 189506038 -61181816 - L1MB3 LINE L1 -8 6175 6115 1586 149 14 11 chr2 189506108 189506384 -61181470 - L1MB2 LINE L1 -69 6102 5826 1784 144 57 31 chr2 189506444 189506798 -61181056 + THE1C LTR MaLR 1 363 -12 9328 143 9 35 chr2 189506801 189508419 -61179435 + THE1C-int LTR MaLR 4 1580 0 1619 178 15 40 chr2 189508435 189508761 -61179093 + THE1B LTR MaLR 47 364 0 305 227 204 45 chr2 189508763 189508895 -61178959 - L1MC4a LINE L1 -1717 6091 5939 1254 102 24 5 chr2 189508909 189509114 -61178740 - L1MA9 LINE L1 0 6312 6104 475 240 114 11 chr2 189509164 189509339 -61178515 - L1MC4a LINE L1 -2322 5486 5294 257 295 32 11 chr2 189509978 189510073 -61177781 - MLT1H LTR MaLR -387 162 66 1880 251 31 22 chr2 189510317 189510827 -61177027 - LTR40a LTR ERVL -4 515 1 579 322 99 31 chr2 189511175 189511721 -61176133 - HAL1b LINE L1 -505 843 261 1982 126 7 3 chr2 189511770 189512071 -61175783 + AluSx SINE Alu 1 302 -10 2868 171 61 22 chr2 189512414 189513006 -61174848 - L1MB1 LINE L1 -182 5986 5372 1486 117 0 5 chr2 189515082 189515288 -61172566 + AluSx SINE Alu 1 205 -107 1018 134 0 0 chr2 189515289 189515431 -61172423 + AluSg/x SINE Alu 153 294 -16 21 0 0 0 chr2 189516349 189516370 -61171484 + AT_rich Low_complexity Low_complexity 1 21 0 2149 127 0 10 chr2 189517215 189517523 -61170331 - AluSx SINE Alu -7 305 1 7798 26 3 1 chr2 189517722 189518617 -61169237 - MER11D LTR ERVK 0 897 1 2070 153 11 11 chr2 189518653 189519018 -61168836 - MER47A DNA MER2_type 0 366 2 975 176 6 11 chr2 189520965 189521141 -61166713 + MLT1A1 LTR MaLR 1 175 -190 28 0 0 0 chr2 189521141 189521169 -61166685 + AT_rich Low_complexity Low_complexity 1 28 0 542 267 104 12 chr2 189521169 189521420 -61166434 - L1MC4 LINE L1 -1 8041 7768 8568 31 6 1 chr2 189521457 189523268 -61164586 - L1PA4 LINE L1 0 6155 4342 927 223 22 5 chr2 189523270 189523454 -61164400 + MLT1A1 LTR MaLR 177 363 -2 252 328 153 15 chr2 189523554 189523685 -61164169 + MIR3 SINE MIR 21 169 -39 562 219 126 44 chr2 189523685 189523868 -61163986 + MLT1J1 LTR MaLR 4 201 -245 271 197 124 10 chr2 189523908 189524005 -61163849 + MLT1I LTR MaLR 286 441 -9 198 283 0 0 chr2 189524102 189524148 -61163706 + L2 LINE L2 2630 2675 -639 1396 233 112 3 chr2 189524179 189524510 -61163344 + MLT1F LTR MaLR 99 465 -77 260 255 113 9 chr2 189524546 189524652 -61163202 - L1MC5 LINE L1 -37 7924 7808 378 311 0 0 chr2 189524913 189525003 -61162851 - MER5A DNA MER1_type -89 100 11 261 267 267 0 chr2 189525021 189525107 -61162747 + MER5A DNA MER1_type 81 189 0 23 68 0 0 chr2 189525295 189525339 -61162515 + AT_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr2 189526750 189526779 -61161075 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 189527553 189527574 -61160280 + AT_rich Low_complexity Low_complexity 1 21 0 252 245 0 0 chr2 189528130 189528183 -61159671 + MLT2E LTR ERVL 34 86 -542 984 319 74 16 chr2 189529164 189529653 -61158201 - L2 LINE L2 -980 2334 1818 1724 191 18 6 chr2 189529982 189530311 -61157543 - MER44D DNA MER2_type 0 609 7 26 0 0 0 chr2 189531846 189531872 -61155982 + AT_rich Low_complexity Low_complexity 1 26 0 224 376 98 16 chr2 189532088 189532466 -61155388 + L2 LINE L2 1939 2347 -967 2034 151 26 20 chr2 189532486 189532838 -61155016 - MLT1A1 LTR MaLR 0 365 12 259 170 0 38 chr2 189533376 189533429 -61154425 - L2 LINE L2 -7 3306 3256 227 369 48 0 chr2 189533528 189533612 -61154242 + L2 LINE L2 3137 3224 -48 278 339 17 17 chr2 189534222 189534337 -61153517 - MIR SINE MIR -56 152 38 23 0 7 0 chr2 189534409 189534464 -61153390 + AT_rich Low_complexity Low_complexity 1 23 0 837 181 0 0 chr2 189534464 189534597 -61153257 - FRAM SINE Alu -24 152 20 471 282 129 0 chr2 189535174 189535344 -61152510 - MIR SINE MIR -25 237 46 297 0 0 0 chr2 189535750 189535783 -61152071 + (TG)n Simple_repeat Simple_repeat 1 33 0 281 249 129 61 chr2 189536039 189536255 -61151599 - HAL1b LINE L1 -41 1307 1107 2229 119 0 3 chr2 189536255 189536567 -61151287 + AluSx SINE Alu 1 311 -1 281 249 129 61 chr2 189536567 189536620 -61151234 - HAL1b LINE L1 -241 1107 1059 1301 234 21 7 chr2 189536620 189536910 -61150944 - AluJo SINE Alu -18 294 1 281 249 129 61 chr2 189536910 189537097 -61150757 - HAL1b LINE L1 -289 1059 819 386 247 65 45 chr2 189537971 189538125 -61149729 + MIR3 SINE MIR 24 180 -28 339 262 186 18 chr2 189538832 189539111 -61148743 - L1ME4a LINE L1 -5 6116 5791 1766 120 117 36 chr2 189539230 189539564 -61148290 - THE1B LTR MaLR -3 361 1 11286 108 8 0 chr2 189539564 189541132 -61146722 - THE1B-int LTR MaLR 0 1580 1 2429 127 5 22 chr2 189541132 189541502 -61146352 - THE1B LTR MaLR 0 364 1 577 295 58 68 chr2 189541765 189542162 -61145692 - LTR16A1 LTR ERVL 0 457 65 450 253 175 42 chr2 189542178 189542510 -61145344 - L1ME4a LINE L1 -1303 4843 4468 1312 280 121 34 chr2 189542626 189543534 -61144320 - HAL1 LINE L1 -117 2390 1404 283 323 53 0 chr2 189543600 189543733 -61144121 - HAL1 LINE L1 -2367 140 1 1620 212 0 0 chr2 189544413 189544710 -61143144 - AluJb SINE Alu -3 309 13 614 284 103 13 chr2 189545716 189545948 -61141906 + MIR SINE MIR 10 262 0 301 270 86 46 chr2 189547749 189547901 -61139953 - MER5A DNA MER1_type -2 187 30 2294 105 0 3 chr2 189548089 189548394 -61139460 - AluSq SINE Alu -9 304 1 2171 126 0 0 chr2 189549091 189549393 -61138461 - AluSx SINE Alu -10 302 1 1987 136 19 19 chr2 189549882 189550192 -61137662 + AluJb SINE Alu 3 312 0 274 234 43 64 chr2 189550330 189550424 -61137430 - MLT1J LTR MaLR -331 180 89 1119 245 80 34 chr2 189551296 189551806 -61136048 + MER34B LTR ERV1 1 563 -2 1929 173 36 0 chr2 189552034 189552369 -61135485 - MER7A DNA MER2_type 0 346 2 2140 247 36 32 chr2 189552461 189553157 -61134697 - L1ME2 LINE L1 -12 6152 5454 508 311 41 8 chr2 189553728 189553972 -61133882 + L1MB8 LINE L1 5921 6172 -6 7899 204 51 12 chr2 189553973 189556442 -61131412 + L1PA15 LINE L1 3590 6158 -7 228 180 0 0 chr2 189556494 189556544 -61131310 + Charlie5 DNA MER1_type 2423 2472 -140 28 29 0 0 chr2 189556544 189556579 -61131275 + AT_rich Low_complexity Low_complexity 1 35 0 1009 65 7 0 chr2 189556600 189556739 -61131115 + L1MA4A LINE L1 6159 6298 -5 21 57 0 0 chr2 189557628 189557663 -61130191 + AT_rich Low_complexity Low_complexity 1 35 0 1983 129 26 59 chr2 189559052 189559440 -61128414 - THE1C LTR MaLR 0 375 1 4405 201 13 26 chr2 189559519 189560375 -61127479 - MER21B LTR ERV1 -18 845 1 21930 63 3 4 chr2 189561388 189564257 -61123597 - L1P LINE L1 -2983 3163 297 603 84 0 0 chr2 189564257 189564340 -61123514 - L1P LINE L1 -6063 83 1 18377 174 17 14 chr2 189564342 189567661 -61120193 - L1M1 LINE L1 -4218 3347 19 2238 104 0 13 chr2 189567684 189567991 -61119863 - AluSp SINE Alu -10 303 1 316 301 92 18 chr2 189568079 189568242 -61119612 + MER34 LTR ERV1 368 542 0 434 205 50 140 chr2 189568864 189568944 -61118910 - MER5A DNA MER1_type -1 188 102 3515 113 50 14 chr2 189568944 189569518 -61118336 + LTR49 LTR ERV1 1 595 0 434 205 50 140 chr2 189569518 189569637 -61118217 - MER5A DNA MER1_type -87 102 7 932 207 19 55 chr2 189569733 189570002 -61117852 - MER63 DNA MER1_type -14 1046 788 3789 149 56 19 chr2 189570002 189570731 -61117123 - MER4D LTR ERV1 0 866 150 279 266 83 9 chr2 189620731 189620840 -61067014 + L1M4 LINE L1 3182 3298 -2848 2147 171 13 69 chr2 189620877 189621326 -61066528 - MLT2B3 LTR ERVL -130 424 1 1247 257 101 18 chr2 189621326 189621773 -61066081 + L1M4 LINE L1 3332 3815 -2331 1961 144 0 3 chr2 189621963 189622280 -61065574 - AluSx SINE Alu 0 316 1 2430 54 7 0 chr2 189623181 189623476 -61064378 - AluY SINE Alu -12 299 3 338 148 0 0 chr2 189623545 189623599 -61064255 - MLT1D LTR MaLR 0 505 452 222 62 0 0 chr2 189623882 189623914 -61063940 + (TATG)n Simple_repeat Simple_repeat 2 33 0 1960 119 0 14 chr2 189623917 189624067 -61063787 - AluSq SINE Alu -30 283 137 2206 120 3 0 chr2 189624067 189624366 -61063488 - AluSp SINE Alu -13 300 1 1960 119 0 14 chr2 189624366 189624493 -61063361 - AluSq SINE Alu -176 137 10 888 272 44 20 chr2 189624729 189624979 -61062875 - MIR SINE MIR -5 257 2 7410 30 0 6 chr2 189626052 189627471 -61060383 - L1PA4 LINE L1 -1 6154 4732 2754 47 0 3 chr2 189627471 189627810 -61060044 + L1P LINE L1 3395 3732 -2414 1978 136 13 10 chr2 189630140 189630442 -61057412 - AluJb SINE Alu -9 303 1 317 308 75 0 chr2 189631429 189631549 -61056305 - MER94 DNA DNA -3 131 3 194 200 0 0 chr2 189631698 189631733 -61056121 + MIR SINE MIR 108 142 -66 1241 211 34 101 chr2 189631745 189632152 -61055702 - MER110 LTR ERV1 -15 476 97 24 0 0 0 chr2 189632247 189632271 -61055583 + AT_rich Low_complexity Low_complexity 1 24 0 915 134 30 0 chr2 189632563 189632697 -61055157 - FRAM SINE Alu -9 167 30 24 32 0 0 chr2 189633823 189633854 -61054000 + AT_rich Low_complexity Low_complexity 1 31 0 311 253 0 13 chr2 189633878 189633953 -61053901 + MLT1L LTR MaLR 1 74 -541 781 189 59 18 chr2 189634021 189634243 -61053611 - MER119 DNA MER1_type -6 577 347 5003 103 47 5 chr2 189634290 189635068 -61052786 - L1PA13 LINE L1 -20 6143 5327 1071 263 29 44 chr2 189635069 189635385 -61052469 - MER119 DNA MER1_type -263 320 10 449 313 57 23 chr2 189635486 189635662 -61052192 + MLT1J LTR MaLR 238 419 -92 1521 175 270 34 chr2 189637158 189637317 -61050537 - LTR29 LTR ERV1 0 622 502 2297 64 6 54 chr2 189637317 189637631 -61050223 - AluY SINE Alu -12 299 1 1521 175 270 34 chr2 189637631 189637974 -61049880 - LTR29 LTR ERV1 -120 502 1 1956 259 55 21 chr2 189637995 189638525 -61049329 + MER77 LTR ERV1 54 601 -4 5477 147 24 13 chr2 189638675 189639842 -61048012 - L1PA16 LINE L1 -1 6165 4994 242 266 21 32 chr2 189639836 189639930 -61047924 - L1P LINE L1 -2528 3618 3526 * 637 125 18 0 chr2 189639965 189640077 -61047777 - L1MA3 LINE L1 -96 6209 6096 * 806 161 88 21 chr2 189640069 189640261 -61047593 - L1MA9 LINE L1 -291 6021 5817 5540 156 40 3 chr2 189640273 189641282 -61046572 - L1MA3 LINE L1 -1 7723 6678 455 100 67 8 chr2 189641283 189641529 -61046325 + (TA)n Simple_repeat Simple_repeat 1 260 0 1974 223 30 2 chr2 189641531 189641998 -61045856 - L1MA3 LINE L1 -870 6695 6216 2022 161 97 5 chr2 189641999 189642379 -61045475 - MSTA LTR MaLR 0 428 14 1656 160 68 0 chr2 189642385 189642541 -61045313 - MSTA-int LTR MaLR -4 1647 1503 354 98 0 0 chr2 189642541 189642592 -61045262 + (CAA)n Simple_repeat Simple_repeat 2 52 0 1656 160 68 0 chr2 189642592 189642729 -61045125 - MSTA-int LTR MaLR -148 1503 1334 43270 46 3 1 chr2 189642738 189648879 -61038975 - L1PA4 LINE L1 -3 6152 2 6569 174 97 3 chr2 189648882 189650115 -61037739 - MSTA-int LTR MaLR -303 1348 1 2034 161 91 15 chr2 189650115 189650513 -61037341 - MSTA LTR MaLR 0 428 1 6328 180 23 5 chr2 189650513 189651791 -61036063 - L1MA3 LINE L1 -1346 6219 4919 2770 16 0 0 chr2 189651791 189652095 -61035759 - AluYa5 SINE Alu -7 304 1 1307 162 0 0 chr2 189652115 189652319 -61035535 - AluSg/x SINE Alu -2 310 107 5711 180 31 16 chr2 189652326 189653016 -61034838 - L1MA3 LINE L1 -2667 4898 4220 2219 123 0 0 chr2 189653016 189653324 -61034530 - AluSc SINE Alu -1 308 1 5711 180 31 16 chr2 189653324 189654867 -61032987 - L1MA3 LINE L1 -3345 4220 2624 9166 182 25 4 chr2 189654873 189656467 -61031387 - L1MA3 LINE L1 -5925 1640 14 429 178 1 0 chr2 189656472 189656567 -61031287 - L1 LINE L1 -2634 3512 3417 1270 280 67 28 chr2 189658239 189658671 -61029183 + LTR16B LTR ERVL 1 449 -15 335 326 0 0 chr2 189658758 189658853 -61029001 + LTR16B LTR ERVL 1 95 -369 190 146 18 18 chr2 189660375 189660430 -61027424 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 469 338 68 5 chr2 189660480 189660687 -61027167 - MIR SINE MIR 0 262 43 462 18 0 0 chr2 189661099 189661154 -61026700 + (CA)n Simple_repeat Simple_repeat 1 55 0 268 220 0 17 chr2 189663082 189663141 -61024713 + CT-rich Low_complexity Low_complexity 2 59 0 23 68 0 0 chr2 189663141 189663185 -61024669 + AT_rich Low_complexity Low_complexity 1 44 0 2570 93 25 3 chr2 189663901 189664268 -61023586 + THE1C LTR MaLR 1 375 0 771 177 0 0 chr2 189664881 189665011 -61022843 + L1PA14 LINE L1 6027 6156 -5 546 91 0 0 chr2 189665629 189665706 -61022148 + (TG)n Simple_repeat Simple_repeat 2 78 0 4453 169 27 50 chr2 189666900 189667784 -61020070 + L1MC1 LINE L1 20 883 -5543 266 157 0 0 chr2 189667790 189667841 -61020013 + L1MC1 LINE L1 975 1025 -5401 2060 153 58 27 chr2 189667841 189668373 -61019481 + MLT2A2 LTR ERVL 1 554 0 5724 214 29 17 chr2 189668378 189670939 -61016915 + L1MC1 LINE L1 1053 6613 0 219 320 62 0 chr2 189671605 189671702 -61016152 + L2 LINE L2 3169 3271 -1 1758 171 77 6 chr2 189671741 189672091 -61015763 + THE1C LTR MaLR 1 375 0 209 176 20 20 chr2 189672671 189672722 -61015132 + (TTATA)n Simple_repeat Simple_repeat 5 55 0 278 343 22 30 chr2 189673743 189673877 -61013977 + MIR3 SINE MIR 7 139 -69 299 308 38 63 chr2 189673889 189674048 -61013806 - L2 LINE L2 -1 3312 3158 180 369 8 85 chr2 189674134 189674264 -61013590 - L2 LINE L2 -224 3048 2929 8274 206 41 19 chr2 189674455 189676308 -61011546 - L1 LINE L1 -743 6822 4929 3802 216 29 34 chr2 189676290 189677340 -61010514 - L1 LINE L1 -3042 4523 3483 * 684 245 8 38 chr2 189677320 189677487 -61010367 - L1M4 LINE L1 -834 5312 5153 * 1272 239 122 6 chr2 189677487 189677814 -61010040 - MLT1A1 LTR MaLR 0 365 1 684 245 8 38 chr2 189677814 189677883 -61009971 - L1M4 LINE L1 -993 5153 5083 1288 224 45 6 chr2 189677896 189678226 -61009628 - L1M4 LINE L1 -1243 4903 4561 412 252 124 51 chr2 189680526 189680995 -61006859 - HAL1 LINE L1 -3 2504 2002 331 307 50 45 chr2 189683264 189683443 -61004411 - MER117 DNA MER1_type 0 197 18 29 0 0 0 chr2 189685188 189685217 -61002637 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 189686598 189686621 -61001233 + AT_rich Low_complexity Low_complexity 1 23 0 1865 119 22 148 chr2 189687307 189687532 -61000322 - LTR45B LTR ERV1 -98 391 139 1636 182 7 26 chr2 189687532 189687840 -61000014 - AluJb SINE Alu -10 302 1 1865 119 22 148 chr2 189687840 189687894 -60999960 - LTR45B LTR ERV1 -350 139 80 1741 179 3 13 chr2 189687894 189687919 -60999935 - AluSx SINE Alu -4 308 284 1099 102 11 6 chr2 189687919 189688096 -60999758 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1741 179 3 13 chr2 189688096 189688377 -60999477 - AluSx SINE Alu -28 284 5 1865 119 22 148 chr2 189688377 189688541 -60999313 - LTR45B LTR ERV1 -409 80 3 254 264 69 0 chr2 189689734 189689806 -60998048 - L2 LINE L2 0 3313 3237 218 140 0 40 chr2 189690250 189690300 -60997554 + (CA)n Simple_repeat Simple_repeat 2 49 0 4661 188 31 12 chr2 189691065 189692340 -60995514 - L1MB3 LINE L1 -7 6412 5125 4012 155 4 36 chr2 189692345 189693060 -60994794 + L1P LINE L1 142 833 -5313 2583 204 32 37 chr2 189693052 189693235 -60994619 - L1MB3 LINE L1 -3166 3216 3034 * 1487 55 0 15 chr2 189693235 189693435 -60994419 - L1PA5 LINE L1 -1 6153 5957 2583 204 32 37 chr2 189693435 189694556 -60993298 - L1MB3 LINE L1 -3348 3034 1920 2424 189 43 4 chr2 189694561 189695122 -60992732 - L1MB3 LINE L1 -5145 1239 657 1642 118 15 97 chr2 189695110 189695439 -60992415 - THE1C-int LTR MaLR -1278 302 1 * 2407 110 19 19 chr2 189695439 189695812 -60992042 - THE1C LTR MaLR 0 375 3 1892 135 7 3 chr2 189696513 189696795 -60991059 - AluSq SINE Alu -30 283 1 224 272 99 62 chr2 189697165 189697246 -60990608 - L2 LINE L2 -1 3271 3188 1467 161 58 38 chr2 189697248 189697539 -60990315 + AluY SINE Alu 1 297 -14 595 306 91 61 chr2 189697649 189697797 -60990057 - L2 LINE L2 -218 3054 2912 1744 225 44 24 chr2 189697797 189698251 -60989603 + MLT1C LTR MaLR 3 465 -2 595 306 91 61 chr2 189698251 189698751 -60989103 - L2 LINE L2 -360 2912 2364 192 268 127 14 chr2 189698806 189698877 -60988977 - L2 LINE L2 -969 2345 2267 532 222 15 37 chr2 189698877 189699012 -60988842 - MER94 DNA DNA -1 133 2 225 304 39 39 chr2 189699454 189699635 -60988219 + MLT1L LTR MaLR 398 578 -37 593 262 55 6 chr2 189700343 189700526 -60987328 - LTR33 LTR ERVL -24 497 306 571 262 114 24 chr2 189700960 189701170 -60986684 + LTR16C LTR ERVL 263 491 0 1521 184 7 40 chr2 189701189 189701493 -60986361 + AluJo SINE Alu 1 294 -18 369 0 0 0 chr2 189702113 189702154 -60985700 + (CA)n Simple_repeat Simple_repeat 2 42 0 1414 185 49 112 chr2 189702840 189703327 -60984527 + L1MA10 LINE L1 5774 6188 -146 2009 121 7 0 chr2 189703327 189703608 -60984246 - AluSq SINE Alu -30 283 1 1414 185 49 112 chr2 189703608 189703746 -60984108 + L1MA10 LINE L1 6188 6333 -1 226 239 15 30 chr2 189703868 189703935 -60983919 + CT-rich Low_complexity Low_complexity 1 66 0 235 250 17 17 chr2 189703942 189704062 -60983792 + (TA)n Simple_repeat Simple_repeat 1 120 0 2741 96 22 69 chr2 189704238 189704304 -60983550 - MLT2A1 LTR ERVL -15 429 361 941 140 6 0 chr2 189704304 189704468 -60983386 + (TA)n Simple_repeat Simple_repeat 2 166 0 2741 96 22 69 chr2 189704468 189704851 -60983003 - MLT2A1 LTR ERVL -83 361 1 272 83 0 42 chr2 189705222 189705270 -60982584 + LTR14B LTR ERVK 1 46 -562 * 1876 112 126 36 chr2 189705258 189705623 -60982231 + LTR14B LTR ERVK 211 608 0 1216 182 18 58 chr2 189705632 189705869 -60981985 - AluJo SINE Alu -48 264 38 2240 97 3 3 chr2 189705869 189706167 -60981687 + AluY SINE Alu 1 298 -13 1216 182 18 58 chr2 189706167 189706204 -60981650 - AluJo SINE Alu -274 38 1 275 277 96 0 chr2 189706834 189706917 -60980937 - MLT1F LTR MaLR -164 378 288 212 279 23 0 chr2 189707459 189707545 -60980309 + (TAAA)n Simple_repeat Simple_repeat 2 89 0 207 273 0 0 chr2 189707568 189707612 -60980242 + (CAA)n Simple_repeat Simple_repeat 2 45 0 219 283 33 43 chr2 189707619 189707711 -60980143 - MIR SINE MIR -18 244 154 283 257 0 18 chr2 189708592 189708701 -60979153 + (TATAA)n Simple_repeat Simple_repeat 1 107 0 182 222 74 0 chr2 189708850 189708904 -60978950 - L3 LINE CR1 -878 699 642 370 344 85 43 chr2 189709008 189709290 -60978564 - L3 LINE CR1 -1081 496 203 461 247 10 0 chr2 189709439 189709536 -60978318 + MER2 DNA MER2_type 1 98 -247 837 78 0 0 chr2 189709840 189709956 -60977898 - L1PA8 LINE L1 -5 6167 6052 705 85 0 0 chr2 189709983 189710077 -60977777 - AluSg/x SINE Alu -27 283 190 1085 100 0 0 chr2 189710077 189710217 -60977637 - AluYa5 SINE Alu -170 141 2 2782 51 3 6 chr2 189710218 189710574 -60977280 - L1PA8 LINE L1 -108 6064 5710 263 349 0 0 chr2 189710677 189710763 -60977091 + CT-rich Low_complexity Low_complexity 5 90 0 21 57 0 0 chr2 189711014 189711049 -60976805 + AT_rich Low_complexity Low_complexity 1 35 0 188 244 64 26 chr2 189711704 189711782 -60976072 + L3 LINE CR1 1322 1402 -175 2370 138 61 7 chr2 189712425 189712851 -60975003 - L1MB3 LINE L1 -293 5890 5442 24 0 0 0 chr2 189712935 189712959 -60974895 + AT_rich Low_complexity Low_complexity 1 24 0 1972 211 79 17 chr2 189713084 189713676 -60974178 - L1MDa LINE L1 -4654 2287 1659 1261 215 4 16 chr2 189763736 189763992 -60923862 + MER4D LTR ERV1 641 893 -10 597 253 55 0 chr2 189764004 189764150 -60923704 - L1MDa LINE L1 -6147 276 123 220 77 39 39 chr2 189764155 189764207 -60923647 + A-rich Low_complexity Low_complexity 2 53 0 993 166 0 34 chr2 189764213 189764388 -60923466 - AluJb SINE Alu -39 273 105 2813 165 90 14 chr2 189764468 189765045 -60922809 + LTR29 LTR ERV1 1 621 -1 28 0 0 0 chr2 189765082 189765110 -60922744 + AT_rich Low_complexity Low_complexity 1 28 0 3602 159 13 0 chr2 189765381 189765991 -60921863 - L1PA16 LINE L1 0 6166 5549 2462 122 6 3 chr2 189766857 189767218 -60920636 + THE1B LTR MaLR 3 364 0 268 269 15 0 chr2 189767417 189767484 -60920370 + L2 LINE L2 3237 3304 -9 186 313 83 42 chr2 189767743 189767839 -60920015 - L2 LINE L2 0 3272 3173 1837 187 22 8 chr2 189767852 189768211 -60919643 + MLT1A1 LTR MaLR 1 364 -1 2481 162 115 2 chr2 189768681 189769175 -60918679 + MER44D DNA MER2_type 1 605 0 2214 168 38 12 chr2 189769346 189769763 -60918091 + MSTA LTR MaLR 1 428 0 203 370 62 29 chr2 189769767 189769975 -60917879 + L2 LINE L2 2540 2754 -560 551 191 0 27 chr2 189770185 189770295 -60917559 + MSTB LTR MaLR 320 426 0 189 394 114 6 chr2 189770332 189770507 -60917347 + L2 LINE L2 2561 2754 -560 2602 39 0 7 chr2 189771257 189771567 -60916287 + AluY SINE Alu 1 308 -3 23 68 0 0 chr2 189772688 189772732 -60915122 + AT_rich Low_complexity Low_complexity 1 44 0 265 276 79 0 chr2 189773891 189773967 -60913887 - MER5A DNA MER1_type -77 112 31 2550 169 7 0 chr2 189773967 189774388 -60913466 + MSTC LTR MaLR 1 424 -4 4276 246 56 81 chr2 189774394 189775905 -60911949 + MSTC-int LTR MaLR 2 1473 -262 192 222 94 103 chr2 189776016 189776133 -60911721 + L2 LINE L2 3153 3268 -45 804 237 147 0 chr2 189776204 189776402 -60911452 - L1MC/D LINE L1 -621 5723 5497 27 49 0 0 chr2 189776559 189776600 -60911254 + AT_rich Low_complexity Low_complexity 1 41 0 1470 145 30 0 chr2 189776887 189777156 -60910698 + L1MA5A LINE L1 6021 6297 0 37 93 0 0 chr2 189777160 189777267 -60910587 + AT_rich Low_complexity Low_complexity 1 107 0 661 194 109 18 chr2 189777447 189777671 -60910183 - L1MC/D LINE L1 -718 5444 5204 544 188 83 0 chr2 189778362 189778495 -60909359 - L1MA10 LINE L1 -8 6326 6183 510 257 62 44 chr2 189778493 189778719 -60909135 - L1ME1 LINE L1 -154 6012 5783 * 22 0 0 0 chr2 189778918 189778940 -60908914 + AT_rich Low_complexity Low_complexity 1 22 0 201 94 0 0 chr2 189779197 189779229 -60908625 + (T)n Simple_repeat Simple_repeat 1 32 0 227 299 13 0 chr2 189779680 189779757 -60908097 + (TA)n Simple_repeat Simple_repeat 2 79 0 22 0 0 0 chr2 189780704 189780726 -60907128 + AT_rich Low_complexity Low_complexity 1 22 0 1306 217 60 28 chr2 189781079 189781443 -60906411 - L1MC4 LINE L1 -429 7613 7238 902 234 58 9 chr2 189781475 189781701 -60906153 - L1MC4 LINE L1 -1033 7009 6773 1944 133 77 0 chr2 189781865 189782188 -60905666 - MER7A DNA MER2_type 0 346 1 2416 150 30 20 chr2 189782191 189782630 -60905224 + MER65A LTR ERV1 1 443 -2 820 200 18 12 chr2 189782714 189782879 -60904975 - MER5B DNA MER1_type -5 173 8 619 277 64 23 chr2 189784726 189784946 -60902908 - MIR SINE MIR 0 262 34 2490 190 38 14 chr2 189785609 189786115 -60901739 - MER73 LTR ERVL 0 644 127 255 299 21 0 chr2 189786174 189786271 -60901583 + L1MC4 LINE L1 7400 7498 -544 400 285 111 50 chr2 189786453 189786751 -60901103 + L1MC4 LINE L1 7607 7922 -120 2453 55 0 13 chr2 189786848 189787159 -60900695 + AluY SINE Alu 1 307 -4 32 57 0 0 chr2 189787454 189787507 -60900347 + AT_rich Low_complexity Low_complexity 1 53 0 2562 177 56 29 chr2 189789103 189789661 -60898193 - L1MC1 LINE L1 -16 6317 5745 288 289 39 51 chr2 189789688 189789844 -60898010 + MLT1L LTR MaLR 165 318 -297 33 80 0 0 chr2 189790122 189790197 -60897657 + AT_rich Low_complexity Low_complexity 1 75 0 31 44 0 0 chr2 189790320 189790365 -60897489 + AT_rich Low_complexity Low_complexity 1 45 0 7623 22 7 0 chr2 189790828 189792173 -60895681 - L1PA3 LINE L1 -4 6151 4803 441 294 79 86 chr2 189792684 189792976 -60894878 - L2 LINE L2 0 3313 3024 257 214 54 0 chr2 189793172 189793228 -60894626 - MIR SINE MIR -63 145 87 11618 203 40 27 chr2 189794209 189797864 -60889990 + L1MA9 LINE L1 2593 6289 -23 780 343 78 25 chr2 189797936 189798498 -60889356 - L2 LINE L2 -809 2505 1914 224 276 12 110 chr2 189800065 189800228 -60887626 - MER5B DNA MER1_type 0 178 32 1693 133 43 0 chr2 189800539 189800794 -60887060 - AluSx SINE Alu -46 266 1 206 329 127 0 chr2 189801026 189801105 -60886749 - L2 LINE L2 -11 3261 3173 378 0 0 0 chr2 189802056 189802098 -60885756 + (TG)n Simple_repeat Simple_repeat 1 42 0 731 90 0 27 chr2 189802697 189802808 -60885046 - L1PA10 LINE L1 0 6168 6061 557 91 11 0 chr2 189802908 189803020 -60884834 - L1P LINE L1 -812 5334 5224 3376 237 66 27 chr2 189803202 189803395 -60884459 - L1MCb LINE L1 -4740 1824 1640 921 101 27 27 chr2 189803395 189803544 -60884310 - L1MA3 LINE L1 0 6305 6157 3376 237 66 27 chr2 189803544 189805087 -60882767 - L1MCb LINE L1 -4924 1640 8 4421 20 0 0 chr2 189805096 189805605 -60882249 - L1PA3 LINE L1 -8 6147 5639 243 289 92 46 chr2 189805646 189805798 -60882056 + L2 LINE L2 3154 3312 -1 453 202 149 35 chr2 189806921 189807035 -60880819 + MER5A DNA MER1_type 24 150 -39 1243 183 62 12 chr2 189807036 189807277 -60880577 + AluJb SINE Alu 19 271 -41 23 0 0 0 chr2 189807277 189807300 -60880554 + AT_rich Low_complexity Low_complexity 1 23 0 193 260 0 0 chr2 189807300 189807350 -60880504 + MER5A DNA MER1_type 140 189 0 1117 242 7 38 chr2 189807406 189807699 -60880155 - MLT1E2 LTR MaLR -337 289 6 1315 252 39 77 chr2 189807710 189808416 -60879438 - MER31-int LTR ERV1 -1034 3902 3160 34 75 0 33 chr2 189808521 189808558 -60879296 + AT_rich Low_complexity Low_complexity 1 38 -78 2425 44 0 14 chr2 189808558 189808854 -60879000 - AluY SINE Alu -17 294 3 34 75 0 33 chr2 189808854 189808936 -60878918 + AT_rich Low_complexity Low_complexity 38 116 0 183 313 21 0 chr2 189809047 189809095 -60878759 - MER5A DNA MER1_type -87 102 54 528 224 0 51 chr2 189809281 189809437 -60878417 - MER31-int LTR ERV1 -1870 3066 2919 246 252 139 70 chr2 189810358 189810473 -60877381 - L2 LINE L2 -2 3311 3189 200 373 20 29 chr2 189810819 189810921 -60876933 - MIR SINE MIR -85 123 23 1263 310 68 38 chr2 189811130 189811704 -60876150 - HERV16 LTR ERVL -3675 1321 731 861 330 79 12 chr2 189812026 189812586 -60875268 + ERVL LTR ERVL 4368 4964 -800 309 265 0 0 chr2 189812775 189812843 -60875011 + L1ME LINE L1 5572 5639 -531 24 0 0 0 chr2 189813328 189813352 -60874502 + AT_rich Low_complexity Low_complexity 1 24 0 691 338 108 12 chr2 189813591 189813990 -60873864 + L2 LINE L2 1056 1492 -1822 753 293 135 39 chr2 189813990 189814376 -60873478 + MLT1F LTR MaLR 1 423 -119 794 222 0 31 chr2 189814379 189814541 -60873313 - THE1-int LTR MaLR -816 764 608 673 317 19 75 chr2 189814574 189814934 -60872920 + MLT1I LTR MaLR 48 387 -22 22 56 0 0 chr2 189815100 189815136 -60872718 + AT_rich Low_complexity Low_complexity 1 36 0 246 81 0 0 chr2 189815338 189815375 -60872479 + (TAA)n Simple_repeat Simple_repeat 3 39 0 189 0 0 0 chr2 189815376 189815397 -60872457 + (TTA)n Simple_repeat Simple_repeat 3 23 0 6864 21 8 4 chr2 189815412 189816689 -60871165 - L1PA4 LINE L1 -107 6048 4762 568 148 0 10 chr2 189816689 189816790 -60871064 + AluSg/x SINE Alu 209 308 -4 34 55 0 0 chr2 189817819 189817874 -60869980 + AT_rich Low_complexity Low_complexity 1 55 0 345 261 127 8 chr2 189817912 189818046 -60869808 - L1ME4a LINE L1 -8 6113 5964 230 304 7 22 chr2 189818046 189818181 -60869673 + (TCTCTG)n Simple_repeat Simple_repeat 5 137 0 567 228 39 0 chr2 189819374 189819501 -60868353 + MER33 DNA MER1_type 2 133 -191 615 186 35 17 chr2 189819588 189819760 -60868094 + MER33 DNA MER1_type 189 363 0 728 253 131 0 chr2 189819768 189819966 -60867888 + MER58A DNA MER1_type 1 224 0 508 269 120 5 chr2 189820810 189821018 -60866836 + MLT1H LTR MaLR 8 247 -302 1024 267 8 4 chr2 189821022 189821262 -60866592 - MLT1E LTR MaLR 0 593 353 666 230 109 42 chr2 189821301 189821540 -60866314 - MLT1E LTR MaLR -338 255 1 995 295 48 9 chr2 189821569 189821884 -60865970 - LTR40a LTR ERVL 0 519 193 3776 19 15 2 chr2 189822877 189823479 -60864375 + L1PA3 LINE L1 5522 6166 0 213 57 0 29 chr2 189823479 189823514 -60864340 + (TAAAA)n Simple_repeat Simple_repeat 1 50 0 782 227 41 10 chr2 189823594 189823788 -60864066 - MLT1B LTR MaLR -1 389 190 1591 255 45 22 chr2 189823899 189824346 -60863508 + LTR26 LTR ERV1 147 603 0 509 197 109 15 chr2 189824435 189824572 -60863282 - MLT1B LTR MaLR -236 154 5 459 224 204 7 chr2 189824674 189824826 -60863028 - MER58A DNA MER1_type 0 224 43 341 247 27 107 chr2 189824980 189825130 -60862724 + MER5B DNA MER1_type 1 138 -40 1830 195 140 102 chr2 189825444 189826126 -60861728 + LTR8A LTR ERV1 1 727 0 509 281 75 54 chr2 189827233 189827567 -60860287 - L1M4 LINE L1 -2847 3299 2959 214 147 0 0 chr2 189827755 189827789 -60860065 + (TC)n Simple_repeat Simple_repeat 1 34 0 7306 34 0 0 chr2 189828325 189829491 -60858363 - L1PA3 LINE L1 -3 6152 4979 4078 34 0 2 chr2 189829491 189829989 -60857865 + L1P LINE L1 3507 4003 -2143 23578 168 14 14 chr2 189830089 189834793 -60853061 - L1P4 LINE L1 -624 5544 844 1239 224 47 50 chr2 189834904 189835288 -60852566 - MLT1B LTR MaLR 0 390 8 28 29 0 0 chr2 189835806 189835841 -60852013 + AT_rich Low_complexity Low_complexity 1 35 0 1409 207 7 25 chr2 189835849 189835929 -60851925 - AluJo SINE Alu -39 273 193 3727 98 0 4 chr2 189835929 189836442 -60851412 - MER9 LTR ERVK 0 511 1 1409 207 7 25 chr2 189836442 189836636 -60851218 - AluJo SINE Alu -119 193 4 195 356 183 10 chr2 189836736 189836840 -60851014 + L2 LINE L2 3149 3270 -2 185 268 0 138 chr2 189836858 189836981 -60850873 - L2 LINE L2 -26 3287 3182 447 113 0 0 chr2 189837232 189837303 -60850551 + (GA)n Simple_repeat Simple_repeat 2 72 0 618 274 82 44 chr2 189837357 189837700 -60850154 - MER90 LTR ERV1 -17 597 242 1157 267 107 26 chr2 189837715 189838145 -60849709 - MLT1D LTR MaLR -1 504 40 234 310 0 11 chr2 189838183 189838270 -60849584 - MER90 LTR ERV1 -387 188 103 273 360 8 0 chr2 189838646 189838771 -60849083 + HAL1b LINE L1 381 506 -842 441 232 18 0 chr2 189838824 189838936 -60848918 + MLT2B2 LTR ERVL 1 114 -401 4137 158 28 9 chr2 189838962 189839640 -60848214 - MER72 LTR ERV1 -27 695 5 1730 218 35 12 chr2 189839650 189840049 -60847805 - MER72-int LTR ERV1 0 6758 6351 633 251 23 128 chr2 189840137 189840435 -60847419 + MLT2D LTR ERVL 91 350 -47 1222 29 40 0 chr2 189840435 189840608 -60847246 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 633 251 23 128 chr2 189840608 189840652 -60847202 + MLT2D LTR ERVL 350 397 0 251 324 42 33 chr2 189840710 189840923 -60846931 + HAL1b LINE L1 670 884 -464 26 50 0 0 chr2 189841083 189841123 -60846731 + AT_rich Low_complexity Low_complexity 1 40 0 252 247 25 49 chr2 189841603 189841684 -60846170 + L2 LINE L2 58 136 -3178 310 200 47 24 chr2 189841691 189841735 -60846119 + MER63D DNA MER1_type 1 42 -888 321 26 0 0 chr2 189841735 189841773 -60846081 + (TG)n Simple_repeat Simple_repeat 2 39 0 310 200 47 24 chr2 189841773 189841813 -60846041 + MER63D DNA MER1_type 42 87 -843 239 172 0 17 chr2 189841813 189841871 -60845983 + (TA)n Simple_repeat Simple_repeat 2 58 0 820 201 210 30 chr2 189841920 189842253 -60845601 + MER63D DNA MER1_type 50 442 -619 1744 194 57 46 chr2 189842285 189842722 -60845132 + MER63D DNA MER1_type 620 1061 0 1033 313 103 17 chr2 189842723 189843187 -60844667 + L2 LINE L2 156 659 -2655 3247 291 76 54 chr2 189843188 189844660 -60843194 + L2 LINE L2 1180 2683 -631 245 100 160 0 chr2 189844718 189844768 -60843086 - Tigger1 DNA MER2_type -949 1469 1412 4537 154 21 44 chr2 189844780 189845616 -60842238 - Tigger1 DNA MER2_type -1601 817 1 1031 224 18 18 chr2 189846863 189847189 -60840665 - L1M4 LINE L1 -915 5231 4906 776 338 114 10 chr2 189847927 189848321 -60839533 - LTR16A LTR ERVL 0 450 16 1121 311 41 21 chr2 189848632 189849115 -60838739 - HERV16 LTR ERVL -2505 2491 1999 377 380 18 6 chr2 189849403 189849569 -60838285 - HERV16 LTR ERVL -3421 1575 1408 3203 166 25 11 chr2 189849671 189850242 -60837612 - Tigger1 DNA MER2_type -1838 580 2 602 222 49 6 chr2 189850243 189850405 -60837449 - MER3 DNA MER1_type -86 123 2 22 70 0 0 chr2 189850622 189850665 -60837189 + AT_rich Low_complexity Low_complexity 1 43 0 387 330 89 41 chr2 189852116 189852706 -60835148 - L1MEd LINE L1 -873 1617 849 2185 119 82 36 chr2 189852748 189853161 -60834693 + MSTB1 LTR MaLR 1 432 0 38 0 0 20 chr2 189854565 189854583 -60833271 + AT_rich Low_complexity Low_complexity 1 18 -30 7332 20 4 42 chr2 189854583 189856164 -60831690 + L1PA3 LINE L1 4608 6153 -2 38 0 0 20 chr2 189856164 189856194 -60831660 + AT_rich Low_complexity Low_complexity 18 48 0 1197 318 40 31 chr2 189856428 189857006 -60830848 + L1MEc LINE L1 29 611 -5785 306 268 78 14 chr2 189857030 189857172 -60830682 + L1MEc LINE L1 702 852 -5544 1123 264 28 45 chr2 189857190 189857542 -60830312 - LTR40a LTR ERVL -23 496 151 308 100 0 0 chr2 189857550 189857600 -60830254 - Tigger3(Golem) DNA MER2_type -2708 321 272 4895 128 73 5 chr2 189857604 189858443 -60829411 + Tigger3b DNA MER2_type 336 1231 0 6665 68 8 0 chr2 189858667 189860164 -60827690 - L1PA7 LINE L1 -6 6148 4637 231 374 86 17 chr2 189860734 189860908 -60826946 - MIR SINE MIR -70 192 7 1089 235 9 0 chr2 189860943 189861164 -60826690 + MER58A DNA MER1_type 2 224 0 919 331 119 36 chr2 189862884 189863883 -60823971 - L2 LINE L2 -1414 1900 819 180 0 0 0 chr2 189864325 189864345 -60823509 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2173 119 0 0 chr2 189864347 189864641 -60823213 - AluSg SINE Alu -16 294 1 23 0 0 0 chr2 189864778 189864801 -60823053 + AT_rich Low_complexity Low_complexity 1 23 0 29 47 0 0 chr2 189865407 189865450 -60822404 + AT_rich Low_complexity Low_complexity 1 43 0 288 70 0 0 chr2 189865621 189865664 -60822190 + (TC)n Simple_repeat Simple_repeat 2 44 0 279 0 0 0 chr2 189865675 189865706 -60822148 + (TG)n Simple_repeat Simple_repeat 2 32 0 316 248 29 7 chr2 189865768 189865905 -60821949 + (TA)n Simple_repeat Simple_repeat 2 141 0 268 340 7 48 chr2 189867313 189867460 -60820394 + L2 LINE L2 1438 1578 -1736 548 316 92 9 chr2 189867557 189867785 -60820069 - LTR16C LTR ERVL -2 489 243 2613 278 56 52 chr2 189867786 189868094 -60819760 + L1M4b LINE L1 11 316 -6643 207 0 0 0 chr2 189868094 189868117 -60819737 + (TA)n Simple_repeat Simple_repeat 1 23 0 4837 48 2 0 chr2 189868121 189868722 -60819132 - L1PA5 LINE L1 0 6154 5553 2613 278 56 52 chr2 189868722 189870597 -60817257 + L1M4b LINE L1 318 2416 -4543 413 324 45 52 chr2 189870750 189871040 -60816814 + L1M4b LINE L1 2480 2767 -4371 1910 125 113 94 chr2 189871062 189871486 -60816368 - Tigger2a DNA MER2_type -2 432 1 1584 178 12 83 chr2 189871630 189872076 -60815778 + L1MB8 LINE L1 5758 6178 0 7198 55 15 2 chr2 189872353 189873587 -60814267 - L1PA8 LINE L1 -1 6171 4936 1143 246 54 92 chr2 189874758 189875283 -60812571 + MLT2B3 LTR ERVL 1 471 -49 264 30 0 0 chr2 189875283 189875316 -60812538 + (TC)n Simple_repeat Simple_repeat 2 34 0 1143 246 54 92 chr2 189875316 189875365 -60812489 + MLT2B3 LTR ERVL 471 520 0 319 365 104 14 chr2 189875989 189876211 -60811643 - L3 LINE CR1 -34 1543 1302 402 282 138 56 chr2 189878109 189878485 -60809369 + MLT1H LTR MaLR 113 519 -30 26 50 0 0 chr2 189879521 189879561 -60808293 + AT_rich Low_complexity Low_complexity 1 40 0 2183 34 0 4 chr2 189879561 189879828 -60808026 - L1PA4 LINE L1 -3 6152 5887 261 61 0 0 chr2 189879828 189879861 -60807993 + L1PA4 LINE L1 5825 5857 -297 2514 66 0 0 chr2 189879887 189880191 -60807663 + AluY SINE Alu 1 304 -7 687 273 46 0 chr2 189880319 189880513 -60807341 + MIR SINE MIR 58 260 -2 527 259 164 26 chr2 189880527 189880917 -60806937 - L1M4 LINE L1 -1225 4921 4478 1627 326 61 28 chr2 189881140 189881861 -60805993 + L2 LINE L2 2227 2971 -343 1915 137 96 6 chr2 189882114 189882449 -60805405 - MSTA LTR MaLR -63 365 1 257 228 0 18 chr2 189883004 189883061 -60804793 + (TG)n Simple_repeat Simple_repeat 2 57 0 23 0 0 0 chr2 189884571 189884594 -60803260 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 189886068 189886092 -60801762 + AT_rich Low_complexity Low_complexity 1 24 0 230 0 0 32 chr2 189887160 189887191 -60800663 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 243 0 0 0 chr2 189887190 189887217 -60800637 + (GA)n Simple_repeat Simple_repeat 2 28 0 195 174 0 87 chr2 189888410 189888456 -60799398 - L2 LINE L2 -11 3302 3261 27 62 0 0 chr2 189888860 189888908 -60798946 + AT_rich Low_complexity Low_complexity 1 48 0 282 194 0 0 chr2 189889602 189889664 -60798190 + (TA)n Simple_repeat Simple_repeat 2 63 0 233 296 23 0 chr2 189889734 189889822 -60798032 - L1MC4 LINE L1 -1339 6703 6614 * 238 287 23 0 chr2 189889743 189889830 -60798024 + L1MC4 LINE L1 6615 6703 -1339 234 233 17 0 chr2 189889870 189889930 -60797924 + L1MCa LINE L1 2004 2064 -4362 * 253 250 0 0 chr2 189889897 189889961 -60797893 - L1MC4 LINE L1 -1339 6703 6640 1459 280 58 71 chr2 189890330 189890537 -60797317 - L2 LINE L2 -639 2675 2467 270 0 0 0 chr2 189890537 189890567 -60797287 + (TG)n Simple_repeat Simple_repeat 2 31 0 1459 280 58 71 chr2 189890567 189891115 -60796739 - L2 LINE L2 -847 2467 1930 22 0 0 0 chr2 189892057 189892079 -60795775 + AT_rich Low_complexity Low_complexity 1 22 0 1845 170 0 10 chr2 189892705 189893016 -60794838 + AluJo SINE Alu 1 308 -4 625 305 58 18 chr2 189893314 189893537 -60794317 - MIR SINE MIR 0 262 31 1895 90 4 8 chr2 189894323 189894578 -60793276 - AluSq SINE Alu -15 298 45 22 0 0 0 chr2 189894588 189894610 -60793244 + AT_rich Low_complexity Low_complexity 1 22 0 31 68 0 0 chr2 189894681 189894740 -60793114 + AT_rich Low_complexity Low_complexity 1 59 0 228 332 123 79 chr2 189894740 189895080 -60792774 - L2 LINE L2 -1 3271 2917 1110 56 0 0 chr2 189895253 189895396 -60792458 + L1P LINE L1 3891 4033 -2113 22 35 0 0 chr2 189895412 189895441 -60792413 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 189895471 189895492 -60792362 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 189895848 189895872 -60791982 + AT_rich Low_complexity Low_complexity 1 24 0 1678 246 90 9 chr2 189896258 189896292 -60791562 - MLT2B2 LTR ERVL -7 508 478 209 33 33 0 chr2 189896292 189896322 -60791532 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 1678 246 90 9 chr2 189896322 189896709 -60791145 - MLT2B2 LTR ERVL -37 478 53 1122 196 171 12 chr2 189896706 189896876 -60790978 + MSTA LTR MaLR 8 150 -278 * 219 36 0 0 chr2 189896876 189896904 -60790950 + (TC)n Simple_repeat Simple_repeat 1 28 0 1122 196 171 12 chr2 189896904 189897090 -60790764 + MSTA LTR MaLR 150 428 0 389 153 0 0 chr2 189897090 189897148 -60790706 - MLT2B2 LTR ERVL -457 58 1 22 0 0 0 chr2 189897225 189897247 -60790607 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 189898110 189898134 -60789720 + AT_rich Low_complexity Low_complexity 1 24 0 1817 168 121 16 chr2 189898179 189898566 -60789288 - MSTA LTR MaLR 0 428 1 1730 106 4 16 chr2 189898566 189898821 -60789033 - MSTA-int LTR MaLR 0 1580 1329 2364 209 43 10 chr2 189898824 189899316 -60788538 - MSTA-int LTR MaLR -549 1102 595 441 95 0 0 chr2 189899335 189899398 -60788456 + (TA)n Simple_repeat Simple_repeat 2 64 0 256 128 0 0 chr2 189899405 189899444 -60788410 + MLT2C1 LTR ERVL 347 385 -12 352 137 0 0 chr2 189899471 189899522 -60788332 + MLT2D LTR ERVL 364 414 0 256 281 107 10 chr2 189899681 189899851 -60788003 + L1M4 LINE L1 3759 3954 -2192 318 50 0 0 chr2 189899874 189899914 -60787940 + (TG)n Simple_repeat Simple_repeat 1 40 0 443 350 56 13 chr2 189900240 189900331 -60787523 - MLT1J2 LTR MaLR -123 327 241 2844 148 11 2 chr2 189900331 189900785 -60787069 - LTR22A LTR ERVK 0 458 1 443 350 56 13 chr2 189900785 189900927 -60786927 - MLT1J2 LTR MaLR -209 241 84 351 288 159 30 chr2 189901245 189901616 -60786238 + L1M4 LINE L1 4350 4768 -1378 3877 237 92 61 chr2 189901995 189903482 -60784372 - L1MD2 LINE L1 -1 6752 5143 2514 138 75 38 chr2 189903482 189903961 -60783893 - LOR1a LTR ERV1 0 497 1 3877 237 92 61 chr2 189903961 189905077 -60782777 - L1MD2 LINE L1 -1610 5143 4063 793 251 11 6 chr2 189905079 189905262 -60782592 - HUERS-P3 LTR ERV1 -8646 273 90 14371 148 10 15 chr2 189905274 189907548 -60780306 + HUERS-P3 LTR ERV1 6658 8918 -1 1965 212 55 57 chr2 189907548 189908161 -60779693 + LTR9 LTR ERV1 1 612 0 626 179 31 49 chr2 189908161 189908323 -60779531 + MSTA-int LTR MaLR 1493 1651 0 2574 162 14 0 chr2 189908331 189908745 -60779109 + MSTA LTR MaLR 9 428 0 4833 192 89 42 chr2 189908745 189909795 -60778059 - L1MD2 LINE L1 -3844 2696 1544 351 0 0 0 chr2 189909795 189909834 -60778020 + (TG)n Simple_repeat Simple_repeat 2 40 0 4833 192 89 42 chr2 189909834 189910397 -60777457 - L1MD2 LINE L1 -4996 1544 1009 5030 201 107 16 chr2 189910403 189911640 -60776214 - L1P5 LINE L1 -1362 4784 3436 3653 174 1 6 chr2 189911643 189912686 -60775168 + L1P5 LINE L1 4759 5795 -356 269 123 0 18 chr2 189912686 189912743 -60775111 + (TA)n Simple_repeat Simple_repeat 2 57 0 366 261 0 22 chr2 189912788 189912880 -60774974 - L1MC4 LINE L1 -1339 6703 6614 1683 100 40 3 chr2 189912902 189913194 -60774660 + L1PB1 LINE L1 5776 6151 0 1698 268 14 76 chr2 189913230 189913858 -60773996 - L1MD2 LINE L1 -5951 589 1 269 235 44 7 chr2 189913868 189914004 -60773850 + (TA)n Simple_repeat Simple_repeat 1 141 0 1792 281 94 15 chr2 189914687 189915494 -60772360 + L1ME3A LINE L1 5300 6170 0 21 100 0 0 chr2 189915850 189915920 -60771934 + AT_rich Low_complexity Low_complexity 1 70 0 985 208 10 10 chr2 189916048 189916245 -60771609 - MER20 DNA MER1_type 0 219 23 410 359 145 16 chr2 189916270 189916814 -60771040 + L2 LINE L2 2518 3138 -175 220 278 83 0 chr2 189917448 189917520 -60770334 + L2 LINE L2 3235 3312 -1 22 35 0 0 chr2 189917562 189917591 -60770263 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 189917645 189917673 -60770181 + AT_rich Low_complexity Low_complexity 1 28 0 1598 227 51 12 chr2 189917764 189918178 -60769676 - MER63B DNA MER1_type -5 431 2 301 275 89 9 chr2 189918318 189918463 -60769391 + MLT1J1 LTR MaLR 43 155 -291 225 0 0 0 chr2 189918497 189918522 -60769332 + (TG)n Simple_repeat Simple_repeat 2 26 0 230 250 0 62 chr2 189918550 189918646 -60769208 - L1MC4 LINE L1 -1339 6703 6614 216 158 0 0 chr2 189918723 189918761 -60769093 + (TA)n Simple_repeat Simple_repeat 1 38 0 1680 193 0 7 chr2 189918940 189919240 -60768614 + AluJo SINE Alu 5 302 -10 446 160 0 90 chr2 189919472 189919599 -60768255 + FLAM_C SINE Alu 30 147 0 26 30 0 0 chr2 189919634 189919667 -60768187 + AT_rich Low_complexity Low_complexity 1 33 0 420 354 43 10 chr2 189919730 189919939 -60767915 - MIR SINE MIR -38 224 9 235 250 18 0 chr2 189919963 189920019 -60767835 + (TATATG)n Simple_repeat Simple_repeat 6 62 0 250 126 185 0 chr2 189920114 189920233 -60767621 + (TTAA)n Simple_repeat Simple_repeat 3 143 0 757 97 0 0 chr2 189920499 189920602 -60767252 + L1P3 LINE L1 1 103 -6358 3981 128 14 6 chr2 189920735 189921359 -60766495 + L1MA8 LINE L1 5542 6170 -121 24 32 0 0 chr2 189921492 189921523 -60766331 + AT_rich Low_complexity Low_complexity 1 31 0 1049 61 8 0 chr2 189921523 189921654 -60766200 - AluY SINE Alu -20 291 160 1186 108 85 27 chr2 189921982 189922205 -60765649 - L1MA9 LINE L1 -5 6307 6072 1694 181 54 3 chr2 189922220 189922591 -60765263 - L1 LINE L1 -1733 4413 4024 1233 240 101 55 chr2 189923166 189923661 -60764193 - MLT2B1 LTR ERVL -2 518 1 428 316 129 18 chr2 189923667 189923892 -60763962 - MIR SINE MIR -11 251 2 1490 216 60 3 chr2 189924554 189924810 -60763044 + MER2 DNA MER2_type 3 243 -102 2223 86 7 7 chr2 189924810 189925112 -60762742 - AluSc SINE Alu -7 302 1 * 2280 98 7 3 chr2 189925112 189925416 -60762438 - AluSg SINE Alu -5 305 1 1490 216 60 3 chr2 189925416 189925474 -60762380 + MER2 DNA MER2_type 547 335 -10 1284 235 100 51 chr2 189925576 189926006 -60761848 - MLT1F1 LTR MaLR 0 567 117 3823 181 26 49 chr2 189926013 189926868 -60760986 - L1MA10 LINE L1 -12 6322 5488 301 252 7 16 chr2 189926868 189926984 -60760870 - MLT1F LTR MaLR -452 115 1 475 290 34 113 chr2 189926986 189927428 -60760426 - MLT1F-int LTR MaLR -4 1367 961 275 308 88 60 chr2 189927525 189927989 -60759865 - HERVL-F LTR ERVL -5061 593 117 1078 228 80 46 chr2 189928027 189928378 -60759476 + MLT1A1 LTR MaLR 3 365 0 247 182 0 0 chr2 189928460 189928504 -60759350 - MLT2F LTR ERVL -2 661 618 11781 209 58 59 chr2 189929107 189930447 -60757407 + L1MA4A LINE L1 1595 2934 -3989 2409 74 6 10 chr2 189930447 189930759 -60757095 + AluY SINE Alu 1 311 0 11781 209 58 59 chr2 189930759 189933246 -60754608 + L1MA4A LINE L1 2934 5421 -1502 1311 224 32 11 chr2 189933246 189933523 -60754331 + AluJb SINE Alu 3 285 -27 11781 209 58 59 chr2 189933523 189933569 -60754285 + L1MA4A LINE L1 5421 5466 -1457 579 51 0 0 chr2 189933569 189933648 -60754206 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 11781 209 58 59 chr2 189933648 189934471 -60753383 + L1MA4A LINE L1 5466 6314 -609 333 68 0 0 chr2 189934509 189934553 -60753301 + (TA)n Simple_repeat Simple_repeat 1 44 0 2459 167 41 6 chr2 189934558 189935048 -60752806 + L1MA4A LINE L1 6491 6997 -8 5276 186 14 16 chr2 189935051 189936438 -60751416 + L1MA6 LINE L1 4906 6294 -6 1412 183 10 38 chr2 189937807 189937875 -60749979 - AluJb SINE Alu 0 331 263 2309 143 92 0 chr2 189937875 189938267 -60749587 + MSTA LTR MaLR 1 428 0 1412 183 10 38 chr2 189938267 189938537 -60749317 - AluJb SINE Alu -68 263 1 212 245 0 0 chr2 189940014 189940063 -60747791 + A-rich Low_complexity Low_complexity 3 51 0 372 391 86 36 chr2 189940141 189940527 -60747327 + L2 LINE L2 2866 3270 -2 1477 244 24 12 chr2 189941243 189941309 -60746545 - MLT1A1 LTR MaLR 0 365 301 2359 78 0 0 chr2 189941309 189941617 -60746237 + AluY SINE Alu 1 308 -3 1477 244 24 12 chr2 189941617 189941914 -60745940 - MLT1A1 LTR MaLR -64 301 1 257 374 69 0 chr2 189942177 189942308 -60745546 + MIR SINE MIR 4 143 -119 473 175 10 0 chr2 189942706 189942809 -60745045 + CT-rich Low_complexity Low_complexity 3 106 0 681 164 7 64 chr2 189943294 189943434 -60744420 + FLAM_C SINE Alu 1 132 -1 23 68 0 0 chr2 189943434 189943478 -60744376 + AT_rich Low_complexity Low_complexity 1 44 0 1912 251 55 48 chr2 189993614 189994565 -60693289 + L1M4 LINE L1 3901 4879 -1267 291 151 38 0 chr2 189994946 189994999 -60692855 - Alu SINE Alu -5 296 242 874 157 0 0 chr2 189995089 189995223 -60692631 + AluJo SINE Alu 1 134 -178 247 211 0 0 chr2 189995223 189995275 -60692579 + A-rich Low_complexity Low_complexity 1 52 0 21 57 0 0 chr2 189995592 189995627 -60692227 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr2 189998165 189998190 -60689664 + AT_rich Low_complexity Low_complexity 1 25 0 272 48 24 0 chr2 189998525 189998567 -60689287 + (CA)n Simple_repeat Simple_repeat 1 43 0 53 57 0 0 chr2 189999235 189999323 -60688531 + AT_rich Low_complexity Low_complexity 1 88 0 1393 166 21 0 chr2 189999444 189999685 -60688169 + AluJo SINE Alu 44 289 -23 1377 214 128 9 chr2 190002618 190002959 -60684895 + MLT1A1 LTR MaLR 1 365 0 239 325 34 60 chr2 190005265 190005382 -60682472 - L2 LINE L2 -2 3270 3157 182 320 0 0 chr2 190005380 190005430 -60682424 + L2 LINE L2 3149 3198 -74 * 295 348 107 61 chr2 190005712 190006056 -60681798 + L2 LINE L2 2251 2617 -697 180 0 0 0 chr2 190006056 190006076 -60681778 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 295 348 107 61 chr2 190006076 190006122 -60681732 + L2 LINE L2 2617 2659 -655 1370 227 107 46 chr2 190006240 190006716 -60681138 - MLT1D LTR MaLR 0 505 1 684 332 52 34 chr2 190006839 190007167 -60680687 + L2 LINE L2 2927 3260 -12 284 204 45 34 chr2 190007687 190007775 -60680079 - MLT1F LTR MaLR -2 540 452 226 179 0 0 chr2 190007811 190007850 -60680004 - MLT1F LTR MaLR -185 370 332 459 234 21 48 chr2 190008370 190008515 -60679339 - MLT1G LTR MaLR -35 555 415 1243 319 93 8 chr2 190008539 190009165 -60678689 - L1MEc LINE L1 -5682 714 36 244 261 15 15 chr2 190009536 190009601 -60678253 + LTR67 LTR ERVL 493 557 0 259 160 0 40 chr2 190009741 190009791 -60678063 - MLT2D LTR ERVL 0 464 417 1175 201 82 14 chr2 190009857 190010136 -60677718 - MLT2D LTR ERVL -116 298 1 23 0 0 0 chr2 190010487 190010510 -60677344 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 190010586 190010612 -60677242 + AT_rich Low_complexity Low_complexity 1 26 0 1699 223 71 16 chr2 190011062 190011497 -60676357 - MLT1C LTR MaLR 0 467 9 213 39 0 0 chr2 190012103 190012129 -60675725 + (CA)n Simple_repeat Simple_repeat 1 26 0 204 304 18 0 chr2 190012253 190012309 -60675545 + MIR SINE MIR 5 61 -201 1602 274 74 31 chr2 190012846 190013400 -60674454 + MLT1E LTR MaLR 11 588 -5 285 353 35 0 chr2 190013443 190013559 -60674295 - MIR SINE MIR -73 189 70 268 269 102 27 chr2 190014981 190015167 -60672687 - L1MC/D LINE L1 -1927 5881 5682 246 219 31 83 chr2 190015168 190015264 -60672590 - L1MC/D LINE L1 -491 5630 5540 186 71 0 0 chr2 190015507 190015535 -60672319 + (TTG)n Simple_repeat Simple_repeat 1 28 0 1876 103 15 0 chr2 190015539 190015810 -60672044 - AluY SINE Alu -36 275 1 27 0 0 0 chr2 190015965 190015992 -60671862 + AT_rich Low_complexity Low_complexity 1 27 0 1448 50 0 0 chr2 190016104 190016283 -60671571 - L1PA8 LINE L1 -315 5857 5679 2338 57 3 0 chr2 190016283 190016579 -60671275 + L1PA8 LINE L1 5871 6170 -2 1006 224 55 0 chr2 190016584 190016801 -60671053 + MER68 LTR ERV1 46 274 -288 1200 177 9 2 chr2 190016801 190017118 -60670736 + MLT1B LTR MaLR 1 388 -2 649 261 98 36 chr2 190017120 190017396 -60670458 + MER68 LTR ERV1 270 562 0 451 184 10 10 chr2 190018265 190018363 -60669491 - MER83 LTR ERV1 -66 382 285 23 33 0 0 chr2 190018560 190018590 -60669264 + AT_rich Low_complexity Low_complexity 1 30 0 290 404 20 13 chr2 190018603 190018754 -60669100 - MIR3 SINE MIR -15 193 42 352 353 49 8 chr2 190019375 190019619 -60668235 - L1M4 LINE L1 -3752 2394 2141 4062 129 62 1 chr2 190020240 190020599 -60667255 + L1PB3 LINE L1 5418 5754 -400 249 43 64 0 chr2 190020599 190020646 -60667208 + (TA)n Simple_repeat Simple_repeat 2 51 0 4062 129 62 1 chr2 190020646 190020981 -60666873 + L1PB3 LINE L1 5754 6154 0 1803 266 22 4 chr2 190021021 190021484 -60666370 - ERVL LTR ERVL -3911 1853 1383 25 0 0 0 chr2 190021516 190021541 -60666313 + AT_rich Low_complexity Low_complexity 1 25 0 247 175 105 0 chr2 190021762 190021819 -60666035 + L1 LINE L1 2305 2367 -3779 4079 153 19 4 chr2 190021824 190022518 -60665336 - Tigger3b DNA MER2_type -526 705 2 626 184 0 0 chr2 190022602 190022711 -60665143 + FLAM_A SINE Alu 1 109 -33 189 74 0 0 chr2 190022719 190022746 -60665108 + (TAA)n Simple_repeat Simple_repeat 2 28 0 25 65 0 0 chr2 190023661 190023707 -60664147 + AT_rich Low_complexity Low_complexity 1 46 0 28 48 0 0 chr2 190024017 190024059 -60663795 + AT_rich Low_complexity Low_complexity 1 42 0 365 250 65 11 chr2 190024523 190024615 -60663239 + L1ME LINE L1 357 453 -5617 2201 245 47 28 chr2 190024616 190025356 -60662498 + L1ME2 LINE L1 5395 6148 -16 4716 275 21 25 chr2 190026333 190028182 -60659672 + L1PA16 LINE L1 2334 4172 -2677 4290 168 16 26 chr2 190028179 190028888 -60658966 + L1PA16 LINE L1 5346 6054 -815 * 1892 154 30 0 chr2 190028888 190029187 -60658667 + AluSx SINE Alu 1 308 -4 4290 168 16 26 chr2 190029187 190029822 -60658032 + L1PA16 LINE L1 6054 6694 -175 2553 23 0 0 chr2 190030374 190030673 -60657181 - L1PA5 LINE L1 -92 6062 5764 664 36 0 0 chr2 190030673 190030750 -60657104 + L1PA6 LINE L1 6065 6147 -7 27 29 0 0 chr2 190031866 190031900 -60655954 + AT_rich Low_complexity Low_complexity 1 34 0 310 272 88 92 chr2 190032604 190032876 -60654978 + HAL1 LINE L1 811 1081 -1426 30 69 0 0 chr2 190032878 190032936 -60654918 + AT_rich Low_complexity Low_complexity 1 58 0 513 27 40 27 chr2 190032957 190033032 -60654822 + L1PA6 LINE L1 6079 6154 0 22 70 0 0 chr2 190033127 190033170 -60654684 + AT_rich Low_complexity Low_complexity 1 43 0 265 401 23 15 chr2 190033256 190033388 -60654466 + MIR3 SINE MIR 3 135 -73 2253 57 0 4 chr2 190034513 190034825 -60653029 + AluY SINE Alu 3 313 0 6368 250 22 8 chr2 190035313 190037102 -60650752 - L1PA16 LINE L1 -1974 4172 2358 4773 196 51 7 chr2 190037096 190038978 -60648876 + L1PA16 LINE L1 4162 6166 0 * 675 289 92 46 chr2 190039268 190040049 -60647805 + HAL1b LINE L1 441 1257 -91 21 71 0 0 chr2 190040080 190040122 -60647732 + AT_rich Low_complexity Low_complexity 1 42 0 1180 97 0 0 chr2 190041333 190041488 -60646366 - AluSg/x SINE Alu -13 299 145 2702 166 7 7 chr2 190042156 190042615 -60645239 - MER65C LTR ERV1 0 461 3 22 56 0 0 chr2 190042670 190042706 -60645148 + AT_rich Low_complexity Low_complexity 1 36 0 976 302 60 14 chr2 190042974 190043322 -60644532 - LTR40a LTR ERVL -27 492 128 318 127 73 0 chr2 190043322 190043377 -60644477 - MLT2B1 LTR ERVL 0 520 462 284 127 18 0 chr2 190043417 190043472 -60644382 + (TA)n Simple_repeat Simple_repeat 2 57 0 1847 206 17 6 chr2 190043472 190043894 -60643960 - MLT2B1 LTR ERVL -40 457 1 13569 186 39 22 chr2 190043894 190046549 -60641305 - ERVL-B1 LTR ERVL -7 5757 3058 528 51 13 39 chr2 190046549 190046564 -60641290 - MLT2B2 LTR ERVL -434 81 67 1037 261 8 4 chr2 190046564 190046802 -60641052 + MER8 DNA MER2_type 1 239 0 528 51 13 39 chr2 190046802 190046864 -60640990 - MLT2B2 LTR ERVL -448 67 6 696 203 8 0 chr2 190046870 190046998 -60640856 - LTR40a LTR ERVL -390 129 1 405 267 0 0 chr2 190047002 190047092 -60640762 - ERVL-B1 LTR ERVL -4 5526 5437 361 279 55 103 chr2 190047455 190047785 -60640069 - ERVL-B1 LTR ERVL -688 2349 2036 259 294 36 10 chr2 190047789 190047943 -60639911 + L1M4 LINE L1 5488 5648 -536 36 62 0 0 chr2 190048153 190048217 -60639637 + AT_rich Low_complexity Low_complexity 1 64 0 1880 118 42 14 chr2 190049263 190049552 -60638302 + AluY SINE Alu 11 307 -4 2198 245 50 64 chr2 190049853 190049899 -60637955 - MLT1E1 LTR MaLR 0 654 609 1587 209 69 33 chr2 190049899 190050349 -60637505 - MLT1C LTR MaLR -1 466 1 2198 245 50 64 chr2 190050349 190050955 -60636899 - MLT1E1 LTR MaLR -45 609 11 22 0 0 0 chr2 190051438 190051460 -60636394 + AT_rich Low_complexity Low_complexity 1 22 0 230 265 44 0 chr2 190052420 190052488 -60635366 + L1M4 LINE L1 2492 2562 -3584 21 36 0 0 chr2 190052594 190052622 -60635232 + AT_rich Low_complexity Low_complexity 1 28 0 1143 258 110 123 chr2 190052742 190054120 -60633734 - MLT1C-int LTR MaLR -10 1361 2 740 267 141 9 chr2 190054121 190054397 -60633457 - MLT1E1 LTR MaLR 0 654 319 22 35 0 0 chr2 190054715 190054744 -60633110 + AT_rich Low_complexity Low_complexity 1 29 0 35016 104 12 11 chr2 190055048 190061162 -60626692 + L1PA6 LINE L1 43 6154 0 562 317 37 76 chr2 190061183 190061641 -60626213 - L2 LINE L2 -12 3301 2862 733 311 127 30 chr2 190061701 190062167 -60625687 - L2 LINE L2 -566 2748 2238 22 35 0 0 chr2 190062905 190062934 -60624920 + AT_rich Low_complexity Low_complexity 1 29 0 621 135 0 0 chr2 190063059 190063155 -60624699 + MER4A LTR ERV1 3 98 -566 1689 151 23 22 chr2 190063155 190063500 -60624354 + MER4A LTR ERV1 261 664 0 10477 107 159 107 chr2 190063505 190064498 -60623356 + MER4A-int LTR ERV1 3 943 -5655 333 109 0 0 chr2 190064498 190064553 -60623301 + (TG)n Simple_repeat Simple_repeat 2 56 0 10477 107 159 107 chr2 190064553 190066736 -60621118 + MER4A-int LTR ERV1 943 3429 -3169 384 333 18 6 chr2 190066734 190066899 -60620955 + ERVL LTR ERVL 4317 4483 -1281 * 325 322 28 51 chr2 190067340 190067554 -60620300 + MER90 LTR ERV1 386 594 -20 1840 146 18 32 chr2 190068252 190068595 -60619259 - MER44D DNA MER2_type -1 608 1 22 0 0 0 chr2 190069637 190069659 -60618195 + AT_rich Low_complexity Low_complexity 1 22 0 294 29 0 0 chr2 190070831 190070866 -60616988 + (TC)n Simple_repeat Simple_repeat 2 36 0 180 0 0 0 chr2 190070865 190070885 -60616969 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 205 200 0 0 chr2 190071085 190071125 -60616729 + T-rich Low_complexity Low_complexity 2 41 0 3189 247 86 23 chr2 190071951 190073040 -60614814 + Charlie1 DNA MER1_type 1516 2685 -76 1015 72 29 0 chr2 190073040 190073179 -60614675 - L1PA13 LINE L1 -5 6158 6016 3189 247 86 23 chr2 190073179 190073258 -60614596 + Charlie1 DNA MER1_type 2685 2758 -3 24 77 0 0 chr2 190073430 190073482 -60614372 + AT_rich Low_complexity Low_complexity 1 52 0 15730 144 32 25 chr2 190074189 190076930 -60610924 + Tigger3(Golem) DNA MER2_type 1 2768 -261 2428 36 0 33 chr2 190076930 190077235 -60610619 - AluY SINE Alu -16 295 1 15730 144 32 25 chr2 190077235 190077499 -60610355 + Tigger3(Golem) DNA MER2_type 2768 3029 0 2015 212 16 49 chr2 190077500 190077728 -60610126 - MLT2B2 LTR ERVL -77 438 231 2887 164 6 10 chr2 190077728 190078216 -60609638 - MER66B LTR ERV1 0 486 1 2015 212 16 49 chr2 190078216 190078440 -60609414 - MLT2B2 LTR ERVL -284 231 1 717 283 34 30 chr2 190078812 190079077 -60608777 - MER90 LTR ERV1 -205 409 144 21 0 0 0 chr2 190079135 190079156 -60608698 + AT_rich Low_complexity Low_complexity 1 21 0 2129 134 0 3 chr2 190079887 190080192 -60607662 + AluSx SINE Alu 1 304 -8 2353 218 29 48 chr2 190080367 190080875 -60606979 + MLT2B3 LTR ERVL 1 500 -54 888 162 67 67 chr2 190080875 190081085 -60606769 - MER6B DNA MER2_type 0 210 1 2353 218 29 48 chr2 190081085 190081126 -60606728 + MLT2B3 LTR ERVL 500 540 -14 661 185 22 15 chr2 190081623 190081758 -60606096 - U8 snRNA snRNA 0 136 1 21 0 0 0 chr2 190082179 190082200 -60605654 + AT_rich Low_complexity Low_complexity 1 21 0 206 0 69 0 chr2 190082384 190082413 -60605441 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 513 314 88 18 chr2 190082662 190082888 -60604966 + MIR SINE MIR 13 254 -8 21 36 0 0 chr2 190082906 190082934 -60604920 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr2 190083021 190083058 -60604796 + AT_rich Low_complexity Low_complexity 1 37 0 2274 184 107 6 chr2 190083504 190084046 -60603808 - L1MA10 LINE L1 -4 6330 5734 3385 206 66 51 chr2 190084050 190085373 -60602481 + L1MB5 LINE L1 4852 6174 0 342 304 33 11 chr2 190085863 190086047 -60601807 + HAL1 LINE L1 1474 1661 -846 226 339 108 8 chr2 190086263 190086393 -60601461 + MLT1J2 LTR MaLR 249 391 -59 405 356 0 97 chr2 190086431 190086678 -60601176 + HAL1 LINE L1 1695 1917 -590 51 17 0 0 chr2 190087076 190087134 -60600720 + AT_rich Low_complexity Low_complexity 1 58 0 278 259 121 0 chr2 190087462 190087578 -60600276 - L1ME LINE L1 -723 5683 5554 29 0 0 0 chr2 190087605 190087634 -60600220 + AT_rich Low_complexity Low_complexity 1 29 0 2173 270 135 22 chr2 190088051 190089603 -60598251 - L1ME LINE L1 -1743 4639 2912 560 146 21 10 chr2 190089672 190089768 -60598086 + MER4A LTR ERV1 1 97 -567 1822 141 0 20 chr2 190089820 190090119 -60597735 + MER4A LTR ERV1 372 664 0 277 316 43 26 chr2 190090215 190090449 -60597405 - L1ME LINE L1 -3705 2677 2440 1346 258 100 54 chr2 190090462 190091054 -60596800 + LTR68 LTR ERV1 122 740 0 341 320 123 15 chr2 190091080 190091414 -60596440 - L1ME LINE L1 -4130 2433 2064 517 295 67 15 chr2 190091444 190091712 -60596142 - L1ME LINE L1 -4572 1991 1710 1737 190 44 0 chr2 190091792 190092113 -60595741 - MER2 DNA MER2_type -10 335 1 595 308 109 47 chr2 190092118 190092586 -60595268 - L1MDa LINE L1 -4786 1596 1078 30 27 0 0 chr2 190092698 190092735 -60595119 + AT_rich Low_complexity Low_complexity 1 37 0 230 0 33 0 chr2 190093048 190093078 -60594776 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1163 221 70 45 chr2 190093492 190093822 -60594032 - MLT1A2 LTR MaLR 0 374 37 416 290 16 8 chr2 190094615 190094739 -60593115 - MLT1J LTR MaLR -336 175 51 183 42 0 0 chr2 190094928 190094952 -60592902 + (TTTTTA)n Simple_repeat Simple_repeat 2 25 0 947 190 173 24 chr2 190095327 190095616 -60592238 + MSTC LTR MaLR 1 332 -96 2113 114 3 7 chr2 190096308 190096605 -60591249 - AluSg SINE Alu -14 296 1 884 329 20 65 chr2 190096789 190097278 -60590576 + L2 LINE L2 2847 3313 0 296 304 60 65 chr2 190098515 190098732 -60589122 + MIR SINE MIR 47 262 0 843 254 31 58 chr2 190098915 190099287 -60588567 - MER92B LTR ERV1 -4 561 45 21 36 0 0 chr2 190100227 190100255 -60587599 + AT_rich Low_complexity Low_complexity 1 28 0 1380 229 65 16 chr2 190100967 190101339 -60586515 + MLT1B LTR MaLR 1 390 0 367 97 0 28 chr2 190101638 190101710 -60586144 + (TA)n Simple_repeat Simple_repeat 2 71 0 498 33 0 0 chr2 190101847 190101907 -60585947 + (TA)n Simple_repeat Simple_repeat 1 60 0 1962 134 0 0 chr2 190102268 190102579 -60585275 + AluSx SINE Alu 1 311 0 193 303 46 59 chr2 190102722 190102874 -60584980 + L2 LINE L2 1872 2021 -1293 1291 181 15 30 chr2 190103145 190103416 -60584438 - AluJo SINE Alu -2 310 44 236 360 151 32 chr2 190104182 190104368 -60583486 + MIR SINE MIR 2 209 -53 334 331 134 0 chr2 190106430 190106572 -60581282 + MIR SINE MIR 19 179 -83 332 311 39 10 chr2 190106692 190106795 -60581059 + L2 LINE L2 3208 3313 0 182 156 22 0 chr2 190107688 190107733 -60580121 + CT-rich Low_complexity Low_complexity 4 49 0 32 57 0 0 chr2 190109265 190109318 -60578536 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr2 190110027 190110048 -60577806 + AT_rich Low_complexity Low_complexity 1 21 0 2141 104 3 3 chr2 190110520 190110818 -60577036 - AluSp SINE Alu -15 298 1 430 83 28 0 chr2 190111041 190111113 -60576741 + (TA)n Simple_repeat Simple_repeat 1 74 0 2308 80 6 13 chr2 190111292 190111603 -60576251 - AluY SINE Alu -2 309 1 21 36 0 0 chr2 190112234 190112262 -60575592 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 190112378 190112414 -60575440 + AT_rich Low_complexity Low_complexity 1 36 0 2226 139 18 0 chr2 190112698 190113035 -60574819 + MER61A LTR ERV1 1 343 0 905 159 16 55 chr2 190113035 190113217 -60574637 + MER61A-int LTR ERV1 1 175 -5042 * 4114 78 57 16 chr2 190113205 190113785 -60574069 - MER61-int LTR ERV1 -1347 3870 3267 3646 85 68 9 chr2 190113784 190114339 -60573515 + MER61A-int LTR ERV1 4629 5216 -1 * 2206 135 6 0 chr2 190114339 190114680 -60573174 + MER61A LTR ERV1 1 343 0 33 43 0 0 chr2 190114814 190114861 -60572993 + AT_rich Low_complexity Low_complexity 1 47 0 1883 182 16 56 chr2 190114895 190115345 -60572509 - MSTB1 LTR MaLR 0 432 1 261 130 0 102 chr2 190115818 190115850 -60572004 + (A)n Simple_repeat Simple_repeat 1 35 -62 7687 21 1 0 chr2 190115850 190117150 -60570704 + L1PA3 LINE L1 4854 6154 -1 261 130 0 102 chr2 190117150 190117225 -60570629 + (A)n Simple_repeat Simple_repeat 35 97 0 482 322 87 51 chr2 190117372 190118111 -60569743 - L1MEd LINE L1 -5338 1058 294 21 0 0 0 chr2 190118267 190118288 -60569566 + AT_rich Low_complexity Low_complexity 1 21 0 213 246 88 0 chr2 190118305 190118362 -60569492 + L2 LINE L2 3251 3312 -1 432 273 66 41 chr2 190119681 190119957 -60567897 - L1ME LINE L1 -704 5466 5190 22 35 0 0 chr2 190119976 190120005 -60567849 + AT_rich Low_complexity Low_complexity 1 29 0 320 339 86 27 chr2 190120133 190120319 -60567535 - L1MEd LINE L1 -6208 201 5 22 0 0 0 chr2 190120620 190120642 -60567212 + AT_rich Low_complexity Low_complexity 1 22 0 926 316 62 50 chr2 190122401 190122796 -60565058 - L2 LINE L2 0 3313 2924 2851 170 10 2 chr2 190122796 190123289 -60564565 - LOR1a LTR ERV1 0 497 1 926 316 62 50 chr2 190123289 190123766 -60564088 - L2 LINE L2 -389 2924 2432 1499 272 60 2 chr2 190124059 190124456 -60563398 - MLT1D LTR MaLR 0 505 86 5077 250 27 24 chr2 190124754 190126807 -60561047 + L1PA12 LINE L1 2182 4227 -3357 2277 95 0 3 chr2 190126807 190127111 -60560743 + AluY SINE Alu 3 305 -6 5077 250 27 24 chr2 190127111 190127510 -60560344 + L1PA12 LINE L1 4227 4623 -2961 228 35 0 0 chr2 190127510 190127539 -60560315 + (GA)n Simple_repeat Simple_repeat 2 30 0 5077 250 27 24 chr2 190127539 190127800 -60560054 + L1PA12 LINE L1 4623 4882 -2702 207 69 0 0 chr2 190127800 190127829 -60560025 + (A)n Simple_repeat Simple_repeat 1 29 0 5077 250 27 24 chr2 190127829 190128495 -60559359 + L1PA12 LINE L1 4882 5613 -1971 3048 193 74 13 chr2 190128657 190129683 -60558171 + L1MB1 LINE L1 4516 5612 -556 527 172 14 90 chr2 190129697 190129728 -60558126 - MLT2B2 LTR ERVL -11 504 472 791 26 35 0 chr2 190129728 190129842 -60558012 + (TAGA)n Simple_repeat Simple_repeat 4 121 0 527 172 14 90 chr2 190129842 190129893 -60557961 - MLT2B2 LTR ERVL -43 472 435 2186 158 28 17 chr2 190129893 190130253 -60557601 + THE1B LTR MaLR 1 364 0 527 172 14 90 chr2 190130253 190130314 -60557540 - MLT2B2 LTR ERVL -80 435 371 1872 199 11 3 chr2 190130337 190130718 -60557136 + L1MB1 LINE L1 5784 6167 -1 317 234 126 9 chr2 190130727 190130838 -60557016 + L1ME4a LINE L1 5994 6117 -4 2032 24 0 28 chr2 190130844 190131097 -60556757 - L1PA2 LINE L1 0 6155 5910 309 113 57 0 chr2 190131206 190131259 -60556595 - L1 LINE L1 -2739 3407 3352 23 65 0 16 chr2 190131260 190131281 -60556573 + AT_rich Low_complexity Low_complexity 1 21 -40 1935 107 32 11 chr2 190131281 190131408 -60556446 + AluSq SINE Alu 1 124 -189 221 57 29 0 chr2 190131408 190131443 -60556411 + (CAAA)n Simple_repeat Simple_repeat 4 39 0 1935 107 32 11 chr2 190131443 190131595 -60556259 + AluSq SINE Alu 124 286 -27 23 65 0 16 chr2 190131595 190131635 -60556219 + AT_rich Low_complexity Low_complexity 21 61 0 32 0 0 0 chr2 190133684 190133716 -60554138 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr2 190133731 190133759 -60554095 + AT_rich Low_complexity Low_complexity 1 28 0 320 283 130 22 chr2 190135620 190135804 -60552050 - HAL1 LINE L1 -738 1769 1566 25 0 0 0 chr2 190135995 190136020 -60551834 + AT_rich Low_complexity Low_complexity 1 25 0 30 0 0 61 chr2 190136142 190136191 -60551663 + AT_rich Low_complexity Low_complexity 1 46 0 278 50 17 50 chr2 190136245 190136305 -60551549 + (TA)n Simple_repeat Simple_repeat 1 58 0 1999 125 14 0 chr2 190136306 190136593 -60551261 - AluSp SINE Alu -22 291 1 27 29 0 0 chr2 190136635 190136669 -60551185 + AT_rich Low_complexity Low_complexity 1 34 0 244 250 0 67 chr2 190136897 190136957 -60550897 + MER58B DNA MER1_type 1 56 -285 * 515 248 60 8 chr2 190136953 190137070 -60550784 + MER58B DNA MER1_type 219 341 0 2426 154 51 37 chr2 190137176 190137747 -60550107 - L1MA8 LINE L1 -5 6286 5708 2208 230 70 48 chr2 190137836 190138608 -60549246 - MLT1A2-int LTR MaLR -488 883 3 642 152 0 0 chr2 190138608 190138713 -60549141 - MLT1A2 LTR MaLR -2 372 268 183 350 31 21 chr2 190138802 190138899 -60548955 + L2 LINE L2 2397 2494 -820 235 358 35 23 chr2 190138961 190139134 -60548720 + L2 LINE L2 2607 2781 -533 27 62 0 0 chr2 190139648 190139696 -60548158 + AT_rich Low_complexity Low_complexity 1 48 0 1367 122 17 17 chr2 190139696 190139934 -60547920 - L1MA3 LINE L1 0 6305 6068 1639 162 51 39 chr2 190140463 190140796 -60547058 - MER1B DNA MER1_type 0 337 1 300 53 0 0 chr2 190140849 190140887 -60546967 + (CCA)n Simple_repeat Simple_repeat 1 38 0 1770 148 55 30 chr2 190141354 190141720 -60546134 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 190141823 190141844 -60546010 + AT_rich Low_complexity Low_complexity 1 21 0 738 113 30 0 chr2 190142085 190142218 -60545636 + L1MA4 LINE L1 6158 6294 -6 442 174 116 0 chr2 190142324 190142410 -60545444 + Tigger7 DNA MER2_type 1 96 -637 * 2710 158 22 7 chr2 190142406 190142863 -60544991 + MER44D DNA MER2_type 142 605 0 802 169 142 62 chr2 190143613 190143826 -60544028 + MER44D DNA MER2_type 2 502 -107 609 141 0 10 chr2 190143826 190143925 -60543929 + MER4A LTR ERV1 1 98 -566 1885 135 6 22 chr2 190143925 190144274 -60543580 + MER4A LTR ERV1 263 664 0 545 204 46 0 chr2 190144274 190144382 -60543472 + MER44D DNA MER2_type 593 705 0 3782 113 10 91 chr2 190144462 190145185 -60542669 + MER4A LTR ERV1 1 664 0 4921 170 51 22 chr2 190145213 190146967 -60540887 - L1MA3 LINE L1 -63 7661 6776 2550 119 8 3 chr2 190146967 190147328 -60540526 - THE1B LTR MaLR 0 364 2 4921 170 51 22 chr2 190147328 190147955 -60539899 - L1MA3 LINE L1 -948 6776 6169 2549 230 40 12 chr2 190147956 190148753 -60539101 - L1MA3 LINE L1 -2670 4895 4077 1157 197 96 28 chr2 190148776 190149041 -60538813 - L1MA3 LINE L1 -3671 3894 3649 672 99 0 0 chr2 190149041 190149142 -60538712 - L1PA8 LINE L1 0 6172 6072 1157 197 96 28 chr2 190149142 190149468 -60538386 - L1MA3 LINE L1 -3916 3649 3257 * 11332 59 9 3 chr2 190149466 190150727 -60537127 + L1PA6 LINE L1 3907 5192 -962 227 0 68 23 chr2 190150727 190150771 -60537083 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 11332 59 9 3 chr2 190150771 190151622 -60536232 + L1PA6 LINE L1 5192 6036 -118 42205 39 21 0 chr2 190151622 190157643 -60530211 + L1PA2 LINE L1 1 6153 -2 4120 192 43 15 chr2 190157630 190157665 -60530189 - L1MA3 LINE L1 -4262 3303 3270 * 1022 46 0 0 chr2 190157665 190157796 -60530058 + L1PA5 LINE L1 6023 6153 -1 4120 192 43 15 chr2 190157796 190157973 -60529881 - L1MA3 LINE L1 -4295 3270 3099 3402 102 16 10 chr2 190157973 190158481 -60529373 + MER9 LTR ERVK 1 511 0 4120 192 43 15 chr2 190158481 190159251 -60528603 - L1MA3 LINE L1 -4466 3099 2293 669 136 0 27 chr2 190159258 190159368 -60528486 - AluSq/x SINE Alu -206 107 1 1818 186 0 0 chr2 190159371 190159667 -60528187 + MSTB2 LTR MaLR 162 457 0 2576 270 82 26 chr2 190159668 190160516 -60527338 + MSTB2-int LTR MaLR 2 897 -754 317 146 0 0 chr2 190160525 190160580 -60527274 + MLT-int LTR MaLR 1681 1735 0 2302 183 36 2 chr2 190160580 190161022 -60526832 + MSTB2 LTR MaLR 1 457 0 1068 202 16 16 chr2 190161022 190161275 -60526579 - L1MB3 LINE L1 -108 6075 5823 4349 174 57 5 chr2 190161281 190162216 -60525638 - L1M4c LINE L1 -3884 2500 1518 * 8319 81 4 6 chr2 190162212 190163351 -60524503 - L1P LINE L1 -1877 4269 3133 7069 85 5 1 chr2 190163350 190164786 -60523068 + L1PA7 LINE L1 4391 5830 -324 * 42316 36 21 3 chr2 190164786 190170822 -60517032 + L1PA2 LINE L1 4 6154 -1 2272 68 3 56 chr2 190170819 190171156 -60516698 + L1PA7 LINE L1 5814 6132 -22 * 1963 177 74 0 chr2 190171173 190171580 -60516274 - L1M4c LINE L1 -4845 1539 1103 2199 38 0 0 chr2 190171962 190172229 -60515625 + L1PA3 LINE L1 5713 5979 -176 * 4581 200 67 6 chr2 190172221 190173259 -60514595 - L1M4c LINE L1 -5268 1116 16 1405 203 100 3 chr2 190173252 190173642 -60514212 - L1M4c LINE L1 -4926 1720 1293 * 1974 207 26 81 chr2 190173646 190174076 -60513778 - L1MB4 LINE L1 -5 6175 5792 369 0 0 0 chr2 190174076 190174117 -60513737 + (CA)n Simple_repeat Simple_repeat 2 42 0 1974 207 26 81 chr2 190174117 190174338 -60513516 - L1MB4 LINE L1 -388 5792 5560 1072 295 127 51 chr2 190174336 190175549 -60512305 - L1M4c LINE L1 -5229 1313 9 * 2024 126 40 7 chr2 190175706 190176007 -60511847 - AluSq SINE Alu -2 311 1 1863 77 35 4 chr2 190176141 190176400 -60511454 - MER11A LTR ERVK 0 1266 1000 * 3660 69 24 7 chr2 190176394 190177018 -60510836 - MER11A LTR ERVK -395 871 1 1117 232 63 17 chr2 190177120 190177422 -60510432 + MER58B DNA MER1_type 23 338 -3 26 30 0 0 chr2 190178204 190178237 -60509617 + AT_rich Low_complexity Low_complexity 1 33 0 292 342 0 0 chr2 190179501 190179580 -60508274 - MIR SINE MIR -96 112 34 36 53 0 0 chr2 190179937 190179994 -60507860 + AT_rich Low_complexity Low_complexity 1 57 0 339 349 36 6 chr2 190180114 190180280 -60507574 + MER102b DNA MER1_type 162 332 -9 242 256 34 111 chr2 190180302 190180419 -60507435 + MIR SINE MIR 41 148 -114 252 271 181 77 chr2 190181588 190181743 -60506111 + MER5B DNA MER1_type 4 174 -4 1903 190 3 3 chr2 190181772 190182114 -60505740 - MER2 DNA MER2_type 0 344 3 320 332 36 18 chr2 190182156 190182379 -60505475 - L1MDb LINE L1 -5292 1251 1025 323 321 102 31 chr2 190183084 190183280 -60504574 - L1MDb LINE L1 -6297 243 34 305 305 39 23 chr2 190184648 190184776 -60503078 + MIR3 SINE MIR 64 193 -15 258 343 74 9 chr2 190185036 190185144 -60502710 + MIR SINE MIR 35 149 -113 682 254 17 17 chr2 190185631 190185804 -60502050 + L2 LINE L2 2242 2414 -900 1071 281 108 31 chr2 190185808 190186310 -60501544 - L2 LINE L2 -28 3285 2751 1813 166 42 12 chr2 190186312 190186649 -60501205 - MER7A DNA MER2_type 0 346 2 251 298 173 19 chr2 190186718 190186822 -60501032 + L2 LINE L2 3151 3270 -2 843 207 53 11 chr2 190186955 190187143 -60500711 - L1PB4 LINE L1 -3 6153 5958 276 343 82 15 chr2 190187148 190187282 -60500572 + MIR3 SINE MIR 66 208 0 8737 219 51 37 chr2 190188285 190190599 -60497255 - L1MB3 LINE L1 -7 6674 4394 1798 182 0 7 chr2 190190599 190190901 -60496953 - AluJb SINE Alu -12 300 1 8737 219 51 37 chr2 190190901 190192109 -60495745 - L1MB3 LINE L1 -2287 4394 3098 2516 117 5 11 chr2 190192109 190192486 -60495368 - THE1C LTR MaLR 0 375 1 8737 219 51 37 chr2 190192486 190192637 -60495217 - L1MB3 LINE L1 -3583 3098 2951 1408 163 227 7 chr2 190192638 190192938 -60494916 - MER47A DNA MER2_type 0 366 1 248 250 0 0 chr2 190192938 190193006 -60494848 - L1MB3 LINE L1 -3693 2951 2884 3737 237 62 24 chr2 190193009 190194395 -60493459 - L1MB3 LINE L1 -3823 2821 1030 1079 184 4 26 chr2 190194395 190194628 -60493226 - L1MA3 LINE L1 0 6305 6078 3737 237 62 24 chr2 190194628 190195046 -60492808 - L1MB3 LINE L1 -5614 1030 629 393 221 25 13 chr2 190195533 190195691 -60492163 + CT-rich Low_complexity Low_complexity 2 161 0 1349 199 68 0 chr2 190195691 190195832 -60492022 - AluJo SINE Alu -34 278 148 258 56 0 0 chr2 190195832 190195868 -60491986 + (TTTTA)n Simple_repeat Simple_repeat 1 36 0 1349 199 68 0 chr2 190195868 190195977 -60491877 - AluJo SINE Alu -164 148 11 25 31 0 0 chr2 190197766 190197798 -60490056 + AT_rich Low_complexity Low_complexity 1 32 0 271 240 115 41 chr2 190198026 190198135 -60489719 - MIR SINE MIR -98 110 6 26 0 0 0 chr2 190199780 190199806 -60488048 + AT_rich Low_complexity Low_complexity 1 26 0 6393 199 43 51 chr2 190200121 190200997 -60486857 - MSTA-int LTR MaLR -186 1465 583 234 0 0 0 chr2 190200997 190201023 -60486831 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6393 199 43 51 chr2 190201023 190201057 -60486797 - MSTA-int LTR MaLR -1068 583 550 2100 136 0 7 chr2 190201057 190201358 -60486496 - AluSx SINE Alu -13 299 1 6393 199 43 51 chr2 190201358 190201923 -60485931 - MSTA-int LTR MaLR -1101 550 1 1634 190 72 79 chr2 190201923 190202354 -60485500 - MSTA LTR MaLR 0 428 1 223 261 0 0 chr2 190205957 190206003 -60481851 + polypyrimidine Low_complexity Low_complexity 2 47 0 26 30 0 0 chr2 190212514 190212547 -60475307 + AT_rich Low_complexity Low_complexity 1 33 0 22 80 0 0 chr2 190212886 190212936 -60474918 + AT_rich Low_complexity Low_complexity 1 50 0 195 350 70 48 chr2 190213566 190213752 -60474102 - L2 LINE L2 -219 3053 2864 22 0 0 0 chr2 190214502 190214524 -60473330 + AT_rich Low_complexity Low_complexity 1 22 0 1385 197 31 24 chr2 190214552 190214846 -60473008 + AluJo SINE Alu 1 296 -16 206 123 27 41 chr2 190224541 190224614 -60463240 + A-rich Low_complexity Low_complexity 5 76 0 24 32 0 0 chr2 190226949 190226980 -60460874 + AT_rich Low_complexity Low_complexity 1 31 0 860 266 29 20 chr2 190227630 190227874 -60459980 + L1M4 LINE L1 8 253 -6289 237 290 0 29 chr2 190227912 190227981 -60459873 + L2 LINE L2 3202 3268 -4 318 364 88 31 chr2 190229928 190230272 -60457582 + L2 LINE L2 2720 3091 -181 2118 52 11 7 chr2 190230427 190230699 -60457155 + AluY SINE Alu 21 293 -18 839 290 85 94 chr2 190230832 190231057 -60456797 + L1M4 LINE L1 608 833 -5801 2146 161 0 16 chr2 190231057 190231429 -60456425 - MER47A DNA MER2_type 0 366 1 839 290 85 94 chr2 190231429 190232325 -60455529 + L1M4 LINE L1 833 1719 -4915 892 93 0 0 chr2 190232456 190232574 -60455280 - AluSg/x SINE Alu -16 296 179 371 269 60 75 chr2 190232585 190232853 -60455001 + L1M4 LINE L1 1990 2253 -4572 748 166 29 17 chr2 190232990 190233165 -60454689 + L1MA4 LINE L1 6118 6294 -6 331 311 81 46 chr2 190233174 190233457 -60454397 + L1M4 LINE L1 2483 2775 -4050 274 274 98 78 chr2 190233486 190233986 -60453868 + L1M4 LINE L1 2819 3328 -3316 612 306 54 5 chr2 190234150 190234372 -60453482 - MIR SINE MIR -28 234 2 742 286 63 20 chr2 190234396 190234854 -60453000 + L1M4 LINE L1 3837 4314 -2330 434 296 45 45 chr2 190234872 190235227 -60452627 + L1M4 LINE L1 4381 4735 -1909 371 214 79 0 chr2 190235405 190235494 -60452360 + MER58B DNA MER1_type 194 289 -52 2086 96 38 3 chr2 190235519 190235810 -60452044 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 190236228 190236249 -60451605 + AT_rich Low_complexity Low_complexity 1 21 0 1594 193 3 10 chr2 190236249 190236554 -60451300 - AluSx SINE Alu -8 304 2 1993 147 3 10 chr2 190236580 190236894 -60450960 + AluSx SINE Alu 1 312 0 7702 18 5 0 chr2 190236966 190237961 -60449893 + L1PA2 LINE L1 5156 6154 -1 420 370 82 62 chr2 190237973 190238678 -60449176 + L1MEc LINE L1 43 761 -5635 253 287 57 8 chr2 190238703 190238825 -60449029 + L1MEc LINE L1 794 921 -5475 369 277 96 16 chr2 190238839 190239088 -60448766 + L1MEc LINE L1 986 1254 -5142 1452 199 18 5 chr2 190239097 190239381 -60448473 + L1M2 LINE L1 1691 2154 -4273 1647 179 23 10 chr2 190239381 190239689 -60448165 + AluJb SINE Alu 1 312 0 1452 199 18 5 chr2 190239689 190239711 -60448143 + L1M2 LINE L1 2154 2174 -4253 2026 143 96 26 chr2 190239813 190240197 -60447657 + MSTB LTR MaLR 1 411 -15 8561 195 5 9 chr2 190240207 190241865 -60445989 + MSTB-int LTR MaLR 1 1651 0 1446 180 120 6 chr2 190241865 190242182 -60445672 + MSTB LTR MaLR 1 353 -73 5408 158 46 10 chr2 190242182 190243909 -60443945 + L1PA13 LINE L1 4366 6152 -11 1634 236 26 0 chr2 190244002 190244421 -60443433 + L1MA9 LINE L1 4873 5302 -844 2788 158 96 94 chr2 190244436 190244856 -60442998 + L1MA9 LINE L1 5417 5840 -472 243 61 0 0 chr2 190244856 190244889 -60442965 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 2788 158 96 94 chr2 190244889 190245190 -60442664 + L1MA9 LINE L1 5840 6139 -173 22 0 0 0 chr2 190245190 190245212 -60442642 + AT_rich Low_complexity Low_complexity 1 22 0 7781 17 0 0 chr2 190245212 190246413 -60441441 - L1PA2 LINE L1 -1 6154 4954 6620 23 0 0 chr2 190246415 190247193 -60440661 + L1PA2 LINE L1 4170 4947 -1199 604 137 43 43 chr2 190247190 190247307 -60440547 + L1MA9 LINE L1 6125 6241 -71 * 480 224 10 0 chr2 190247316 190247414 -60440440 - Tigger5 DNA MER2_type -2 2321 2223 293 220 0 0 chr2 190247416 190247466 -60440388 - Tigger5 DNA MER2_type -2273 50 1 371 372 39 53 chr2 190247652 190247937 -60439917 + L2 LINE L2 2992 3272 0 267 222 44 100 chr2 190248251 190248341 -60439513 - MER68 LTR ERV1 -10 552 468 180 246 35 18 chr2 190249548 190249605 -60438249 + L2 LINE L2 2730 2787 -527 21 57 0 0 chr2 190250368 190250403 -60437451 + AT_rich Low_complexity Low_complexity 1 35 0 238 331 37 44 chr2 190250748 190250884 -60436970 + L2 LINE L2 2329 2463 -851 200 247 11 45 chr2 190251060 190251149 -60436705 + T-rich Low_complexity Low_complexity 1 86 0 205 315 0 0 chr2 190251149 190251203 -60436651 + MIR SINE MIR 209 262 0 509 267 67 0 chr2 190251591 190251670 -60436184 - L1MA10 LINE L1 0 6334 6256 1191 188 98 155 chr2 190251670 190252302 -60435552 - L1ME2 LINE L1 -77 6087 5492 923 283 43 2 chr2 190252462 190252858 -60434996 + L1MD2 LINE L1 3336 3747 -2399 324 162 34 56 chr2 190252880 190253059 -60434795 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 265 191 55 9 chr2 190253021 190253131 -60434723 + (TA)n Simple_repeat Simple_repeat 1 115 0 * 899 256 89 34 chr2 190253134 190253516 -60434338 + L1MD2 LINE L1 3767 4169 -1977 903 263 21 10 chr2 190253518 190253807 -60434047 + L1MD2 LINE L1 4590 4881 -1265 366 171 0 122 chr2 190253812 190253935 -60433919 + L1MC5 LINE L1 6782 6889 -1072 1494 142 54 54 chr2 190253938 190254255 -60433599 + Tigger2 DNA MER2_type 2392 2708 -10 1107 219 57 95 chr2 190254274 190254711 -60433143 + L1MD2 LINE L1 5715 6112 -52 21 36 0 0 chr2 190256023 190256051 -60431803 + AT_rich Low_complexity Low_complexity 1 28 0 499 282 34 21 chr2 190257637 190257802 -60430052 - MIR SINE MIR -40 168 2 249 273 13 0 chr2 190258283 190258360 -60429494 + CT-rich Low_complexity Low_complexity 4 81 0 1616 274 38 20 chr2 190259242 190259801 -60428053 + L1MEc LINE L1 355 923 -5473 3418 266 100 35 chr2 190259966 190261043 -60426811 + L1MEc LINE L1 1202 2208 -4007 342 0 0 0 chr2 190261043 190261081 -60426773 + (CA)n Simple_repeat Simple_repeat 1 38 0 3418 266 100 35 chr2 190261081 190262803 -60425051 + L1MEc LINE L1 2208 4142 -2073 28 0 0 0 chr2 190313773 190313801 -60374053 + AT_rich Low_complexity Low_complexity 1 28 0 2682 19 0 16 chr2 190314733 190315049 -60372805 + AluY SINE Alu 1 311 0 7470 137 27 9 chr2 190315438 190316705 -60371149 + HSMAR2 DNA Mariner 1 1290 -12 352 100 129 0 chr2 190316737 190316807 -60371047 + HSMAR2 DNA Mariner 1223 1301 -1 234 117 50 83 chr2 190316836 190316896 -60370958 + L1MC4 LINE L1 6646 6703 -1339 34 79 0 0 chr2 190317903 190317979 -60369875 + AT_rich Low_complexity Low_complexity 1 76 0 35 41 0 0 chr2 190318065 190318114 -60369740 + AT_rich Low_complexity Low_complexity 1 49 0 21 95 0 0 chr2 190318350 190318413 -60369441 + AT_rich Low_complexity Low_complexity 1 63 0 3554 89 34 4 chr2 190318585 190319122 -60368732 - L1PA8 LINE L1 -3 6169 5617 1696 113 12 8 chr2 190319122 190319426 -60368428 + L1PA8A LINE L1 5219 5523 -608 24 96 0 0 chr2 190320272 190320345 -60367509 + AT_rich Low_complexity Low_complexity 1 73 0 22 0 0 0 chr2 190320893 190320915 -60366939 + AT_rich Low_complexity Low_complexity 1 22 0 33 43 0 0 chr2 190321253 190321300 -60366554 + AT_rich Low_complexity Low_complexity 1 47 0 25 0 0 0 chr2 190321587 190321612 -60366242 + AT_rich Low_complexity Low_complexity 1 25 0 389 333 0 0 chr2 190321929 190322037 -60365817 - MER63A DNA MER1_type -19 191 84 740 275 32 7 chr2 190322125 190322556 -60365298 - L1ME LINE L1 -533 5637 5195 308 298 94 48 chr2 190322633 190323046 -60364808 - L1ME LINE L1 -1103 5043 4612 845 295 78 48 chr2 190323091 190323491 -60364363 + L1M4 LINE L1 29 440 -6419 269 270 11 16 chr2 190323496 190323588 -60364266 + L1M4 LINE L1 5686 5774 -1183 1770 228 110 50 chr2 190323600 190324281 -60363573 + MER50 LTR ERV1 13 734 0 508 229 25 55 chr2 190324313 190324354 -60363500 + L1M4 LINE L1 5800 5841 -1116 2328 81 7 0 chr2 190324354 190324652 -60363202 + AluSx SINE Alu 2 301 -11 508 229 25 55 chr2 190324652 190324811 -60363043 + L1M4 LINE L1 5841 5994 -963 7181 215 16 1 chr2 190324831 190326165 -60361689 + L1PA15-16 LINE L1 1 1354 -5495 488 275 63 118 chr2 190326193 190326814 -60361040 + L1M4b LINE L1 1401 1987 -4960 2043 121 0 7 chr2 190327311 190327608 -60360246 + AluSg SINE Alu 1 295 -15 21 71 0 0 chr2 190328479 190328521 -60359333 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr2 190328915 190328940 -60358914 + AT_rich Low_complexity Low_complexity 1 25 0 1831 148 0 20 chr2 190329012 190329316 -60358538 + AluSx SINE Alu 1 298 -14 183 120 40 20 chr2 190329604 190329654 -60358200 + (TA)n Simple_repeat Simple_repeat 2 52 0 29 70 0 0 chr2 190329666 190329723 -60358131 + AT_rich Low_complexity Low_complexity 1 57 0 1234 272 83 51 chr2 190329733 190330104 -60357750 + L1M4b LINE L1 2892 3250 -3707 2428 46 3 13 chr2 190330104 190330406 -60357448 + AluY SINE Alu 4 302 -9 1234 272 83 51 chr2 190330406 190330460 -60357394 + L1M4b LINE L1 3250 3301 -3656 254 29 29 0 chr2 190330460 190330495 -60357359 + (TA)n Simple_repeat Simple_repeat 2 37 0 1864 105 12 0 chr2 190330495 190330752 -60357102 - AluSg SINE Alu -27 283 24 1234 272 83 51 chr2 190330752 190331467 -60356387 + L1M4b LINE L1 3300 4271 -2686 621 273 47 32 chr2 190331468 190331746 -60356108 + L1M4b LINE L1 4427 4708 -2249 40 49 0 0 chr2 190331929 190331990 -60355864 + AT_rich Low_complexity Low_complexity 1 61 0 26 50 0 0 chr2 190332160 190332200 -60355654 + AT_rich Low_complexity Low_complexity 1 40 0 31 0 0 0 chr2 190332820 190332851 -60355003 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 190333020 190333041 -60354813 + AT_rich Low_complexity Low_complexity 1 21 0 914 191 191 50 chr2 190334045 190334364 -60353490 - THE1B LTR MaLR 0 364 1 4101 152 10 10 chr2 190334364 190335054 -60352800 - THE1B-int LTR MaLR 0 1580 891 3786 143 16 50 chr2 190335084 190335769 -60352085 - THE1B-int LTR MaLR -916 664 3 1377 195 69 31 chr2 190335773 190336122 -60351732 - THE1B LTR MaLR -2 362 1 180 335 36 54 chr2 190336128 190336295 -60351559 + L2 LINE L2 2702 2865 -449 2852 133 0 41 chr2 190336345 190336381 -60351473 - MER1A DNA MER1_type -2173 529 493 2180 98 0 0 chr2 190336381 190336690 -60351164 - AluSc SINE Alu 0 310 2 2852 133 0 41 chr2 190336690 190337117 -60350737 - MER1A DNA MER1_type -2209 493 84 234 322 40 40 chr2 190337129 190337281 -60350573 + L2 LINE L2 3107 3258 -55 300 91 0 0 chr2 190337470 190337514 -60350340 + (CA)n Simple_repeat Simple_repeat 2 45 0 468 0 0 0 chr2 190338088 190338140 -60349714 + (TA)n Simple_repeat Simple_repeat 2 53 0 195 397 0 0 chr2 190338419 190338482 -60349372 - L2 LINE L2 -54 3218 3156 26 30 0 0 chr2 190338491 190338524 -60349330 + AT_rich Low_complexity Low_complexity 1 33 0 29 0 0 0 chr2 190338552 190338581 -60349273 + AT_rich Low_complexity Low_complexity 1 29 0 763 333 96 58 chr2 190338679 190339368 -60348486 - L2 LINE L2 -378 2936 2202 312 27 0 0 chr2 190339368 190339405 -60348449 + (CA)n Simple_repeat Simple_repeat 2 38 0 763 333 96 58 chr2 190339405 190339635 -60348219 - L2 LINE L2 -1112 2202 1982 317 308 74 69 chr2 190340928 190341292 -60346562 + MLT1L LTR MaLR 250 615 0 21 0 0 0 chr2 190341332 190341353 -60346501 + AT_rich Low_complexity Low_complexity 1 21 0 1324 225 78 10 chr2 190341847 190342233 -60345621 - MER92A LTR ERV1 0 412 1 212 175 53 0 chr2 190342638 190342695 -60345159 + (TTTG)n Simple_repeat Simple_repeat 1 60 0 183 100 0 0 chr2 190343170 190343200 -60344654 + (TG)n Simple_repeat Simple_repeat 1 30 0 24 32 0 0 chr2 190344131 190344162 -60343692 + AT_rich Low_complexity Low_complexity 1 31 0 1596 181 20 0 chr2 190344545 190344843 -60343011 - AluJo SINE Alu -8 304 1 654 163 32 8 chr2 190345006 190345129 -60342725 + FLAM_C SINE Alu 1 126 -7 25 0 0 0 chr2 190345138 190345163 -60342691 + AT_rich Low_complexity Low_complexity 1 25 0 1885 204 49 84 chr2 190345362 190345895 -60341959 - MER52A LTR ERV1 -35 1720 1207 277 265 65 30 chr2 190345871 190346050 -60341804 - MER52A LTR ERV1 -304 1346 544 * 2249 199 244 99 chr2 190346193 190347269 -60340585 - MER52A LTR ERV1 -524 1231 1 26 50 0 0 chr2 190348875 190348915 -60338939 + AT_rich Low_complexity Low_complexity 1 40 0 648 243 55 11 chr2 190349902 190350174 -60337680 - L1M4 LINE L1 -1509 4637 4354 294 95 0 0 chr2 190350188 190350230 -60337624 + (TG)n Simple_repeat Simple_repeat 1 42 0 3416 194 28 1 chr2 190350255 190350934 -60336920 + L1MC1 LINE L1 5632 6328 -5 3721 266 29 11 chr2 190350942 190352167 -60335687 - L1MEc LINE L1 -1050 5165 3919 13504 163 18 15 chr2 190352170 190354566 -60333288 + Tigger1 DNA MER2_type 2 2402 -16 736 242 10 20 chr2 190354581 190354779 -60333075 - L1MEc LINE L1 -2299 3916 3721 2234 236 50 10 chr2 190354799 190355594 -60332260 - L1MEc LINE L1 -2579 3636 2810 1686 260 75 22 chr2 190355598 190355798 -60332056 - L1MEc LINE L1 -3316 2899 2711 2113 135 0 0 chr2 190355798 190356110 -60331744 - AluSx SINE Alu 0 312 1 1686 260 75 22 chr2 190356110 190356648 -60331206 - L1MEc LINE L1 -3504 2711 2175 697 273 46 0 chr2 190356775 190357013 -60330841 - L1MEc LINE L1 -5571 825 577 199 0 65 0 chr2 190357238 190357269 -60330585 + (TA)n Simple_repeat Simple_repeat 2 34 0 316 204 11 57 chr2 190357269 190357357 -60330497 + L1MC4 LINE L1 6612 6695 -1347 1927 144 3 0 chr2 190357390 190357675 -60330179 - AluSp SINE Alu -27 286 1 322 132 15 15 chr2 190357706 190357774 -60330080 + CT-rich Low_complexity Low_complexity 3 70 0 22 0 0 0 chr2 190357774 190357796 -60330058 + AT_rich Low_complexity Low_complexity 1 22 0 1358 86 76 5 chr2 190357796 190358006 -60329848 - L1MA3 LINE L1 0 6305 6081 227 247 94 0 chr2 190358704 190358789 -60329065 + L1MC4 LINE L1 7947 8039 -3 858 350 57 10 chr2 190358836 190359224 -60328630 + LTR16C LTR ERVL 43 448 -43 30 83 0 0 chr2 190359613 190359685 -60328169 + AT_rich Low_complexity Low_complexity 1 72 0 28 29 0 0 chr2 190360643 190360678 -60327176 + AT_rich Low_complexity Low_complexity 1 35 0 304 279 71 36 chr2 190360926 190361066 -60326788 - L2 LINE L2 -2 3311 3167 711 268 63 43 chr2 190361503 190361996 -60325858 + L1MC/D LINE L1 1390 1892 -4504 586 250 92 0 chr2 190362021 190362173 -60325681 - MER58A DNA MER1_type -28 196 31 432 256 90 22 chr2 190362191 190362460 -60325394 + L1MC/D LINE L1 5266 5558 -744 1147 277 73 23 chr2 190362481 190362758 -60325096 - L1ME3A LINE L1 -133 6106 5844 585 0 0 0 chr2 190362758 190362823 -60325031 + (TTTTA)n Simple_repeat Simple_repeat 2 66 0 1597 175 36 0 chr2 190362825 190363099 -60324755 - AluJb SINE Alu -28 284 1 1147 277 73 23 chr2 190363099 190363295 -60324559 - L1ME3A LINE L1 -395 5844 5606 321 256 165 23 chr2 190363399 190363532 -60324322 - MLT1H LTR MaLR -2 547 396 226 330 39 0 chr2 190363717 190363820 -60324034 - MLT1H LTR MaLR -383 166 60 291 305 17 0 chr2 190363890 190364008 -60323846 - L1ME3A LINE L1 -1318 4897 4778 1852 118 50 105 chr2 190364009 190364391 -60323463 - MER61B LTR ERV1 0 425 65 394 129 16 0 chr2 190364438 190364500 -60323354 + MER61B LTR ERV1 1 63 -362 8217 189 33 27 chr2 190364920 190366795 -60321059 - L1 LINE L1 -1112 5034 3149 481 291 34 6 chr2 190367059 190367234 -60320620 - L1ME3A LINE L1 -2872 3343 3164 2123 147 42 11 chr2 190367367 190367720 -60320134 + THE1B LTR MaLR 1 364 0 11277 103 5 1 chr2 190367720 190369292 -60318562 + THE1B-int LTR MaLR 1 1578 -2 1915 161 52 9 chr2 190369294 190369642 -60318212 + THE1B LTR MaLR 1 363 -1 2068 125 7 0 chr2 190369642 190369945 -60317909 + AluSc SINE Alu 1 305 -4 461 245 111 43 chr2 190369982 190370235 -60317619 - L1ME3A LINE L1 -3195 3020 2751 24 32 0 0 chr2 190370278 190370309 -60317545 + AT_rich Low_complexity Low_complexity 1 31 0 2219 116 0 0 chr2 190370359 190370694 -60317160 - AluSc SINE Alu 0 335 1 21 0 0 0 chr2 190370952 190370973 -60316881 + AT_rich Low_complexity Low_complexity 1 21 0 263 297 34 0 chr2 190371017 190371135 -60316719 - L1ME3A LINE L1 -4106 2290 2169 1882 184 56 10 chr2 190371528 190371919 -60315935 - L1PB4 LINE L1 -2 6154 5746 282 97 27 39 chr2 190371901 190371966 -60315888 + L1M2 LINE L1 5744 5809 -491 * 243 236 0 0 chr2 190371970 190372042 -60315812 + (TA)n Simple_repeat Simple_repeat 2 73 0 283 308 0 0 chr2 190372046 190372137 -60315717 - L1MC4 LINE L1 -1337 6705 6615 260 303 0 0 chr2 190372060 190372149 -60315705 + L1MC4 LINE L1 6614 6702 -1340 * 330 255 0 43 chr2 190372150 190372244 -60315610 - L1MC4 LINE L1 -1339 6703 6614 4389 178 31 13 chr2 190372251 190373685 -60314169 - L1P5 LINE L1 -365 5791 4327 259 162 108 0 chr2 190373890 190373964 -60313890 - L1MDa LINE L1 -4826 1714 1633 195 232 0 0 chr2 190373964 190374020 -60313834 + (TA)n Simple_repeat Simple_repeat 2 57 0 201 184 26 0 chr2 190374054 190374092 -60313762 + (CATATA)n Simple_repeat Simple_repeat 1 39 0 306 100 0 0 chr2 190375518 190375568 -60312286 - L1PB4 LINE L1 0 6156 6107 601 268 83 31 chr2 190375827 190376055 -60311799 + MER97a DNA MER1_type? 2 241 -653 3688 239 68 11 chr2 190376061 190377068 -60310786 + Tigger6a DNA MER2_type 7 1070 -13 863 265 38 0 chr2 190377323 190377534 -60310320 + MER97c DNA MER1_type? 295 513 -577 378 252 98 14 chr2 190378748 190378891 -60308963 - L1ME4a LINE L1 -239 5882 5728 551 89 13 0 chr2 190381258 190381337 -60306517 - MADE1 DNA Mariner 0 80 1 372 287 133 7 chr2 190382429 190382579 -60305275 + MIR SINE MIR 92 260 -2 415 221 60 81 chr2 190382721 190382750 -60305104 + MLT2C1 LTR ERVL 20 165 -232 563 150 0 67 chr2 190382750 190382870 -60304984 + MLT1E3 LTR MaLR 66 177 -447 226 279 0 58 chr2 190382957 190383043 -60304811 + MLT2C2 LTR ERVL 336 416 -48 250 216 0 0 chr2 190383044 190383095 -60304759 + CT-rich Low_complexity Low_complexity 2 52 0 5292 130 15 41 chr2 190383732 190383808 -60304046 + L1PA13 LINE L1 5207 5283 -880 1910 159 0 0 chr2 190383808 190384103 -60303751 + AluSg SINE Alu 1 295 -15 5292 130 15 41 chr2 190384103 190384995 -60302859 + L1PA13 LINE L1 5283 6150 -13 954 204 6 0 chr2 190385004 190385176 -60302678 + MLT2D LTR ERVL 186 358 -56 239 68 68 34 chr2 190385180 190385239 -60302615 + (TAGA)n Simple_repeat Simple_repeat 3 63 0 265 128 0 0 chr2 190385244 190385283 -60302571 + MLT2D LTR ERVL 366 404 -10 2129 184 10 5 chr2 190385490 190385877 -60301977 - Tigger2a DNA MER2_type 0 434 46 4619 140 10 31 chr2 190385877 190386440 -60301414 + L1PA16 LINE L1 5404 5948 -218 1995 150 3 10 chr2 190386440 190386754 -60301100 + AluSx SINE Alu 1 312 0 4619 140 10 31 chr2 190386754 190386969 -60300885 + L1PA16 LINE L1 5948 6166 0 3254 242 46 42 chr2 190387117 190388322 -60299532 + L1M4 LINE L1 3187 4396 -1750 1057 149 10 35 chr2 190388371 190388651 -60299203 - MER1B DNA MER1_type 0 339 1 26 0 0 0 chr2 190389530 190389556 -60298298 + AT_rich Low_complexity Low_complexity 1 26 0 28 29 0 0 chr2 190390191 190390226 -60297628 + AT_rich Low_complexity Low_complexity 1 35 0 22 99 0 0 chr2 190390237 190390308 -60297546 + AT_rich Low_complexity Low_complexity 1 71 0 3202 96 0 5 chr2 190390518 190390964 -60296890 - MLT2A1 LTR ERVL 0 444 1 187 290 92 34 chr2 190392673 190392819 -60295035 + MIR3 SINE MIR 8 165 -58 202 150 0 25 chr2 190393786 190393826 -60294028 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 42626 33 21 1 chr2 190394474 190400502 -60287352 + L1PA2 LINE L1 3 6153 -2 2155 70 35 0 chr2 190400539 190400825 -60287029 + AluY SINE Alu 1 296 -15 423 257 10 0 chr2 190401640 190401741 -60286113 - MER5A DNA MER1_type -78 111 10 270 229 0 0 chr2 190402004 190402074 -60285780 + (TA)n Simple_repeat Simple_repeat 2 71 0 407 286 65 45 chr2 190403384 190403583 -60284271 - MIR SINE MIR -16 246 44 210 37 0 0 chr2 190405107 190405134 -60282720 + (CAA)n Simple_repeat Simple_repeat 2 28 0 678 217 50 39 chr2 190405154 190405334 -60282520 + AluJo SINE Alu 86 267 -45 2012 111 0 88 chr2 190405679 190406021 -60281833 - AluSq SINE Alu -1 312 1 8345 116 4 1 chr2 190406088 190407313 -60280541 + L1P LINE L1 3370 4598 -1548 586 245 10 78 chr2 190408489 190408693 -60279161 - MER58C DNA MER1_type 0 215 26 2246 232 18 11 chr2 190408694 190409237 -60278617 - Tigger6a DNA MER2_type -417 666 120 1012 211 98 31 chr2 190409281 190409599 -60278255 + MER2 DNA MER2_type 2 340 -4 243 203 31 62 chr2 190409778 190409842 -60278012 + L2 LINE L2 3249 3310 -3 367 298 41 41 chr2 190409883 190410101 -60277753 - L1ME4a LINE L1 -279 5842 5625 22 56 0 0 chr2 190410527 190410563 -60277291 + AT_rich Low_complexity Low_complexity 1 36 0 1369 184 4 12 chr2 190411387 190411642 -60276212 + L1PA16 LINE L1 5913 6165 -1 482 297 29 25 chr2 190411704 190411845 -60276009 + L1MC5 LINE L1 6971 7115 -846 1974 164 11 32 chr2 190411845 190411917 -60275937 - THE1B LTR MaLR 0 364 292 2410 77 0 3 chr2 190411917 190412229 -60275625 + AluY SINE Alu 1 311 0 1974 164 11 32 chr2 190412229 190412528 -60275326 - THE1B LTR MaLR -72 292 1 482 297 29 25 chr2 190412528 190412625 -60275229 + L1MC5 LINE L1 7115 7210 -751 2438 77 0 0 chr2 190412806 190413116 -60274738 + AluY SINE Alu 1 310 -1 399 41 0 0 chr2 190413773 190413822 -60274032 + (TG)n Simple_repeat Simple_repeat 2 50 0 24 32 0 0 chr2 190415296 190415327 -60272527 + AT_rich Low_complexity Low_complexity 1 31 0 27 0 0 0 chr2 190415641 190415668 -60272186 + AT_rich Low_complexity Low_complexity 1 27 0 30 0 0 0 chr2 190415922 190415952 -60271902 + AT_rich Low_complexity Low_complexity 1 30 0 1465 226 0 3 chr2 190416193 190416476 -60271378 + AluJo SINE Alu 1 282 -30 194 105 26 0 chr2 190416481 190416519 -60271335 + (TG)n Simple_repeat Simple_repeat 2 40 0 2285 253 35 30 chr2 190416759 190417561 -60270293 - L1MC4a LINE L1 -1747 6061 5256 383 280 83 99 chr2 190417762 190418329 -60269525 - L1MC4a LINE L1 -1200 4946 4389 2119 127 16 30 chr2 190419303 190419672 -60268182 + THE1B LTR MaLR 1 364 0 1647 65 18 23 chr2 190419729 190419889 -60267965 - AluSp SINE Alu -16 297 137 2487 68 3 0 chr2 190419889 190420198 -60267656 - AluY SINE Alu -1 310 1 1647 65 18 23 chr2 190420198 190420254 -60267600 - AluSp SINE Alu -176 137 82 1564 192 24 37 chr2 190420256 190420631 -60267223 - MLT1B LTR MaLR -8 382 13 233 302 73 50 chr2 190421599 190421778 -60266076 - LTR33 LTR ERVL -47 474 292 474 281 50 25 chr2 190421854 190422014 -60265840 - LTR33 LTR ERVL -337 184 21 180 216 0 0 chr2 190422265 190422316 -60265538 + (TATATG)n Simple_repeat Simple_repeat 3 53 0 548 244 210 103 chr2 190422576 190423438 -60264416 + MER52A LTR ERV1 202 1755 0 24 53 0 0 chr2 190423743 190423781 -60264073 + AT_rich Low_complexity Low_complexity 1 38 0 608 222 104 102 chr2 190424501 190424884 -60262970 + L1MC4 LINE L1 7647 8030 -12 344 175 258 0 chr2 190424880 190424977 -60262877 + L1MC4 LINE L1 7790 7911 -131 * 2122 121 7 0 chr2 190425269 190425566 -60262288 + AluSq SINE Alu 1 299 -14 351 332 118 0 chr2 190425720 190425931 -60261923 + HAL1 LINE L1 1113 1348 -1159 22 56 0 0 chr2 190425941 190425977 -60261877 + AT_rich Low_complexity Low_complexity 1 36 0 2800 109 80 0 chr2 190426417 190426867 -60260987 + LTR19A LTR ERV1 1 486 0 366 298 31 37 chr2 190427127 190427288 -60260566 - MLT1J LTR MaLR -95 416 257 262 255 204 10 chr2 190427756 190427854 -60260000 - L2 LINE L2 -18 3295 3179 591 172 30 0 chr2 190428483 190428582 -60259272 + MLT1D LTR MaLR 1 102 -403 248 228 206 11 chr2 190428586 190428678 -60259176 + MLT1D LTR MaLR 211 320 -185 21 82 0 0 chr2 190428739 190428788 -60259066 + AT_rich Low_complexity Low_complexity 1 49 0 332 270 29 69 chr2 190429121 190429295 -60258559 + L1M4 LINE L1 15 181 -6361 1150 27 14 0 chr2 190429390 190429536 -60258318 - L1PA4 LINE L1 0 6155 6008 429 339 184 30 chr2 190429570 190429970 -60257884 + L1M4 LINE L1 350 825 -5717 234 0 0 0 chr2 190429970 190429996 -60257858 + (TTGTG)n Simple_repeat Simple_repeat 4 29 0 429 339 184 30 chr2 190429996 190430035 -60257819 + L1M4 LINE L1 825 857 -5685 571 298 44 6 chr2 190430740 190430921 -60256933 + MIR SINE MIR 16 203 -59 22 0 0 0 chr2 190431058 190431080 -60256774 + AT_rich Low_complexity Low_complexity 1 22 0 879 198 24 0 chr2 190431418 190431585 -60256269 - AluJb SINE Alu -4 308 138 30 0 0 0 chr2 190432257 190432287 -60255567 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 190432401 190432427 -60255427 + AT_rich Low_complexity Low_complexity 1 26 0 2118 118 3 10 chr2 190432686 190433000 -60254854 - AluSx SINE Alu 0 312 1 32 67 0 0 chr2 190433009 190433069 -60254785 + AT_rich Low_complexity Low_complexity 1 60 0 315 0 0 0 chr2 190433410 190433445 -60254409 + (CA)n Simple_repeat Simple_repeat 2 36 0 1736 175 11 3 chr2 190433727 190434013 -60253841 + AluJb SINE Alu 4 291 -21 290 264 97 0 chr2 190434014 190434120 -60253734 + L1MB1 LINE L1 5429 5549 -620 43 35 0 0 chr2 190435469 190435526 -60252328 + AT_rich Low_complexity Low_complexity 1 57 0 338 206 0 0 chr2 190435555 190435618 -60252236 + L1MB1 LINE L1 5827 5889 -279 2439 71 0 0 chr2 190436187 190436482 -60251372 + AluY SINE Alu 1 295 -16 2129 111 10 0 chr2 190437271 190437568 -60250286 + AluSq SINE Alu 1 300 -13 225 222 0 0 chr2 190437582 190437636 -60250218 - MER113 DNA MER1_type? -103 418 365 238 217 43 0 chr2 190437766 190437858 -60249996 - MER113 DNA MER1_type? -346 175 80 372 233 13 138 chr2 190438423 190438582 -60249272 + MER5B DNA MER1_type 40 178 0 14427 121 19 13 chr2 190439273 190442452 -60245402 - L1PA8 LINE L1 -18 6154 2957 7554 139 20 25 chr2 190442463 190443737 -60244117 + L1P3 LINE L1 10 1276 -5185 21 0 0 0 chr2 190444594 190444615 -60243239 + AT_rich Low_complexity Low_complexity 1 21 0 191 188 21 0 chr2 190445047 190445095 -60242759 + GA-rich Low_complexity Low_complexity 2 50 0 1599 189 64 5 chr2 190445751 190446127 -60241727 - L1MC3 LINE L1 0 7785 7388 784 263 78 0 chr2 190446094 190446413 -60241441 - L1MCa LINE L1 -3592 2972 2629 * 386 264 0 0 chr2 190446435 190446583 -60241271 + (CAGT)n Simple_repeat Simple_repeat 3 150 0 719 153 22 51 chr2 190446585 190446722 -60241132 - MER7A DNA MER2_type 0 336 204 1567 186 4 4 chr2 190446732 190447012 -60240842 + Ricksha DNA DNA 9 288 -2958 3540 165 30 19 chr2 190447013 190448359 -60239495 + Ricksha DNA DNA 1823 3234 -39 1091 156 62 14 chr2 190448366 190448577 -60239277 - MER7A DNA MER2_type -127 219 1 1622 219 23 9 chr2 190448597 190449012 -60238842 - MLT2B1 LTR ERVL -51 464 1 796 209 127 23 chr2 190449033 190449340 -60238514 - L1MCa LINE L1 -3957 2607 2269 778 245 78 17 chr2 190449529 190449874 -60237980 - L1MCa LINE L1 -5002 1043 759 680 201 7 52 chr2 190449879 190450029 -60237825 + MER44D DNA MER2_type 2 414 -195 2577 149 62 4 chr2 190450029 190450500 -60237354 + Tigger2 DNA MER2_type 2 499 -2219 1287 108 42 5 chr2 190450502 190450716 -60237138 + Ricksha DNA DNA 2923 3144 -110 8794 148 13 8 chr2 190450716 190452136 -60235718 + Tigger2 DNA MER2_type 502 1929 -789 605 92 61 0 chr2 190452175 190452273 -60235581 + Ricksha DNA DNA 3038 3141 -110 307 172 16 31 chr2 190452275 190452339 -60235515 + Tigger2 DNA MER2_type 502 564 -2154 3041 87 5 2 chr2 190452350 190452753 -60235101 - MLT2A1 LTR ERVL -40 404 1 712 183 71 24 chr2 190452753 190452922 -60234932 + L1 LINE L1 3992 4168 -1978 1031 104 25 2 chr2 190452975 190453176 -60234678 - Tigger7 DNA MER2_type -1 2586 2338 * 2811 155 41 16 chr2 190453171 190453660 -60234194 - Tigger2 DNA MER2_type -243 2475 1975 429 56 0 0 chr2 190453662 190453716 -60234138 + MLT2A1 LTR ERVL 391 444 0 22480 112 38 45 chr2 190453716 190454209 -60233645 + HERVL-A1-A1 LTR ERVL 1 496 -5158 2112 128 0 0 chr2 190454209 190454513 -60233341 - AluSx SINE Alu 0 312 9 22480 112 38 45 chr2 190454513 190457864 -60229990 + HERVL-A1-A1 LTR ERVL 496 3819 -1835 10638 96 9 0 chr2 190457854 190459276 -60228578 + HERVL-A1-A1 LTR ERVL 4220 5654 0 * 1547 63 0 0 chr2 190459276 190459467 -60228387 + MLT2A1 LTR ERVL 1 191 -253 283 57 8 0 chr2 190459466 190459514 -60228340 + MLT2A1 LTR ERVL 363 404 -40 * 248 309 83 17 chr2 190459573 190459694 -60228160 + MLT1G LTR MaLR 421 590 0 2069 111 7 14 chr2 190459718 190460007 -60227847 - AluSc SINE Alu -22 287 1 21 36 0 0 chr2 190460749 190460777 -60227077 + AT_rich Low_complexity Low_complexity 1 28 0 1425 230 3 3 chr2 190460970 190461261 -60226593 + AluJo SINE Alu 5 295 -17 210 279 0 15 chr2 190461587 190461655 -60226199 + (TA)n Simple_repeat Simple_repeat 2 68 0 2199 73 0 41 chr2 190462593 190462907 -60224947 + AluY SINE Alu 11 311 0 29 70 0 0 chr2 190463278 190463335 -60224519 + AT_rich Low_complexity Low_complexity 1 57 0 2693 154 14 0 chr2 190463583 190464005 -60223849 - MSTA LTR MaLR 0 428 1 2456 64 0 3 chr2 190464063 190464361 -60223493 + AluY SINE Alu 1 297 -14 219 352 113 0 chr2 190464405 190464564 -60223290 + L3 LINE CR1 649 825 -752 32 26 0 0 chr2 190464634 190464673 -60223181 + AT_rich Low_complexity Low_complexity 1 39 0 31 0 0 0 chr2 190465738 190465769 -60222085 + AT_rich Low_complexity Low_complexity 1 31 0 1197 199 190 20 chr2 190465921 190465961 -60221893 - MLT2D LTR ERVL -11 504 472 201 39 0 0 chr2 190465961 190465987 -60221867 + (TG)n Simple_repeat Simple_repeat 2 27 0 1197 199 190 20 chr2 190465987 190466299 -60221555 - MLT2D LTR ERVL -43 472 5 2292 92 3 0 chr2 190466303 190466597 -60221257 + AluY SINE Alu 1 295 -16 753 0 20 10 chr2 190467713 190467811 -60220043 + (TCTA)n Simple_repeat Simple_repeat 1 99 0 749 154 69 0 chr2 190468313 190468470 -60219384 - AluSg/x SINE Alu 0 309 144 180 0 0 0 chr2 190468482 190468502 -60219352 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 404 173 74 0 chr2 190468780 190468861 -60218993 - AluSg/x SINE Alu -17 295 209 457 280 34 0 chr2 190468864 190468982 -60218872 + LTR33 LTR ERVL 56 177 -344 1881 212 24 5 chr2 190469056 190469480 -60218374 + L1MB5 LINE L1 5675 6106 -68 23 0 0 0 chr2 190469510 190469533 -60218321 + AT_rich Low_complexity Low_complexity 1 23 0 291 328 0 17 chr2 190469663 190469779 -60218075 + L2 LINE L2 3200 3313 0 184 263 88 50 chr2 190469813 190469893 -60217961 - MIR SINE MIR -148 114 32 22 35 0 0 chr2 190470040 190470069 -60217785 + AT_rich Low_complexity Low_complexity 1 29 0 2215 133 31 8 chr2 190471113 190471467 -60216387 - THE1B LTR MaLR -2 362 1 9662 123 35 38 chr2 190471469 190473052 -60214802 - THE1B-int LTR MaLR -2 1578 1 2363 142 0 6 chr2 190473052 190473418 -60214436 - THE1B LTR MaLR 0 364 1 1971 139 0 3 chr2 190474064 190474359 -60213495 - AluSc SINE Alu -15 294 1 204 228 0 0 chr2 190474487 190474544 -60213310 + (TA)n Simple_repeat Simple_repeat 2 58 0 2828 214 27 4 chr2 190477182 190477888 -60209966 - L1 LINE L1 -1575 4571 3850 22 56 0 0 chr2 190478239 190478275 -60209579 + AT_rich Low_complexity Low_complexity 1 36 0 3897 205 21 8 chr2 190478396 190478723 -60209131 - Ricksha DNA DNA -2525 721 400 1747 136 185 22 chr2 190478723 190479091 -60208763 + MSTA LTR MaLR 1 428 0 3897 205 21 8 chr2 190479091 190479470 -60208384 - Ricksha DNA DNA -2846 400 6 689 114 49 0 chr2 190479551 190479669 -60208185 + L1P3 LINE L1 2 962 -5499 4508 65 2 0 chr2 190479672 190480243 -60207611 + L1PA6 LINE L1 5583 6154 0 14815 175 29 5 chr2 190480798 190483852 -60204002 + L1MA3 LINE L1 9 3138 -4427 417 210 12 0 chr2 190483893 190483974 -60203880 + L1MA3 LINE L1 4910 4991 -2574 3297 180 44 10 chr2 190484001 190486174 -60201680 + L1MA3 LINE L1 5303 7723 -1 24 53 0 0 chr2 190486416 190486454 -60201400 + AT_rich Low_complexity Low_complexity 1 38 0 3078 244 54 27 chr2 190487431 190488387 -60199467 + L1MA4 LINE L1 1094 2075 -4774 1195 178 43 13 chr2 190488398 190488628 -60199226 + MSTB LTR MaLR 190 426 0 4262 194 38 9 chr2 190488630 190489970 -60197884 + L1MA4 LINE L1 4124 6919 -83 5298 192 27 20 chr2 190489984 190491696 -60196158 + L1MA5 LINE L1 4299 6024 -276 2139 118 0 19 chr2 190491696 190492009 -60195845 + AluSg SINE Alu 1 307 -3 5298 192 27 20 chr2 190492009 190492288 -60195566 + L1MA5 LINE L1 6024 6300 0 340 280 76 57 chr2 190492982 190493193 -60194661 + MIR SINE MIR 27 241 -21 21 0 0 0 chr2 190493632 190493653 -60194201 + AT_rich Low_complexity Low_complexity 1 21 0 234 316 38 25 chr2 190494229 190494308 -60193546 - L2 LINE L2 -1466 1848 1769 1666 172 22 44 chr2 190494312 190494466 -60193388 + L1MA4 LINE L1 5895 6051 -249 2099 125 0 0 chr2 190494466 190494763 -60193091 + AluY SINE Alu 1 297 -14 1666 172 22 44 chr2 190494763 190495015 -60192839 + L1MA4 LINE L1 6051 6292 -8 290 355 7 14 chr2 190495240 190495378 -60192476 + MERVL LTR ERVL 2290 2426 -3059 333 345 71 12 chr2 190495700 190495952 -60191902 + MERVL LTR ERVL 3174 3440 -2214 3643 236 46 1 chr2 190496323 190497330 -60190524 - L1 LINE L1 -2595 3551 2500 1821 163 0 0 chr2 190497331 190497625 -60190229 - AluJb SINE Alu -5 307 14 1309 26 0 0 chr2 190497626 190497781 -60190073 - L1PA4 LINE L1 -33 6122 5968 24 32 0 0 chr2 190498014 190498045 -60189809 + AT_rich Low_complexity Low_complexity 1 31 0 1065 164 92 0 chr2 190498088 190498283 -60189571 + AluJb SINE Alu 86 298 -14 227 269 75 15 chr2 190498665 190498732 -60189122 + L3 LINE CR1 1504 1574 -3 204 81 0 54 chr2 190499122 190499159 -60188695 + (TTTTA)n Simple_repeat Simple_repeat 3 37 0 309 68 0 0 chr2 190499856 190499900 -60187954 + (GA)n Simple_repeat Simple_repeat 1 44 0 1710 187 47 29 chr2 190500194 190500574 -60187280 + MLT1B LTR MaLR 4 390 0 442 110 236 87 chr2 190500755 190500882 -60186972 + MER4C LTR ERV1 302 447 -18 1672 202 62 30 chr2 190501223 190501742 -60186112 - MER67C LTR ERV1 -31 483 1 22 0 0 0 chr2 190502785 190502807 -60185047 + AT_rich Low_complexity Low_complexity 1 22 0 1974 137 60 23 chr2 190503329 190503680 -60184174 + THE1B LTR MaLR 1 364 0 1335 275 71 5 chr2 190505457 190505839 -60182015 - ERVL LTR ERVL -3829 1935 1529 691 307 36 4 chr2 190505832 190505897 -60181957 - ERVL LTR ERVL -4719 1045 983 * 405 0 0 0 chr2 190505897 190505942 -60181912 + (TA)n Simple_repeat Simple_repeat 2 46 0 691 307 36 4 chr2 190505942 190506101 -60181753 - ERVL LTR ERVL -4781 983 814 702 304 74 4 chr2 190506138 190506381 -60181473 - ERVL LTR ERVL -5061 703 444 441 252 94 0 chr2 190506398 190506525 -60181329 + Ricksha DNA DNA 6 144 -1110 22 0 0 0 chr2 190506528 190506550 -60181304 + AT_rich Low_complexity Low_complexity 1 22 0 3703 163 33 0 chr2 190506550 190507157 -60180697 - Ricksha DNA DNA -1394 652 26 29 28 0 0 chr2 190507216 190507252 -60180602 + AT_rich Low_complexity Low_complexity 1 36 0 547 300 57 55 chr2 190507991 190508461 -60179393 + MER110 LTR ERV1 41 491 0 536 236 75 11 chr2 190509099 190509273 -60178581 - L1ME3A LINE L1 0 6170 5986 257 228 50 99 chr2 190509564 190509766 -60178088 + L1ME3A LINE L1 5844 6035 -135 2299 98 0 0 chr2 190510592 190510889 -60176965 + AluSg SINE Alu 1 297 -13 1747 195 101 5 chr2 190511617 190512043 -60175811 - MLT1C LTR MaLR 0 467 1 735 306 120 19 chr2 190512354 190512720 -60175134 - LTR16C LTR ERVL 0 491 89 2141 139 19 16 chr2 190513152 190513526 -60174328 + THE1C LTR MaLR 1 375 0 255 103 0 0 chr2 190514189 190514228 -60173626 + (CA)n Simple_repeat Simple_repeat 2 40 0 1757 165 149 11 chr2 190515297 190515673 -60172181 - MSTA LTR MaLR 0 428 1 459 398 13 4 chr2 190516051 190516287 -60171567 - MIR SINE MIR -19 243 6 239 226 36 24 chr2 190516671 190516755 -60171099 - L1ME3 LINE L1 -7 6155 6071 210 125 0 50 chr2 190516755 190516795 -60171059 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 1551 187 21 0 chr2 190517207 190517496 -60170358 + L1MC1 LINE L1 24 318 -6108 542 174 0 0 chr2 190517500 190517607 -60170247 - AluSg/x SINE Alu 0 302 196 3371 178 25 60 chr2 190517620 190518372 -60169482 + L1MC1 LINE L1 322 1045 -4862 778 217 53 15 chr2 190518342 190518669 -60169185 + L1MC1 LINE L1 2273 2479 -3947 * 716 326 40 53 chr2 190518680 190519131 -60168723 + L1PA13 LINE L1 791 1235 -6339 451 300 33 7 chr2 190519266 190519416 -60168438 + L1PA13 LINE L1 2144 2297 -5277 2161 265 45 27 chr2 190520132 190521003 -60166851 + L1PA13 LINE L1 2221 3031 -4543 1642 254 50 6 chr2 190521000 190521484 -60166370 + L1MC1 LINE L1 4777 5281 -1145 * 4941 172 53 11 chr2 190521529 190522537 -60165317 + L1MC1 LINE L1 5534 6583 -30 30 0 0 0 chr2 190522746 190522776 -60165078 + AT_rich Low_complexity Low_complexity 1 30 0 30973 89 8 3 chr2 190523349 190528000 -60159854 - L1ME LINE L1 -501 5665 1004 6169 134 19 19 chr2 190528000 190528975 -60158879 - LTR13 LTR ERVK 0 1007 32 261 91 0 0 chr2 190528975 190529008 -60158846 - LTR13 LTR ERVK -941 66 34 458 147 0 0 chr2 190529008 190529076 -60158778 - LTR13 LTR ERVK -939 68 1 5168 175 19 29 chr2 190529076 190530085 -60157769 - L1P LINE L1 -5137 1009 11 1365 266 158 21 chr2 190530106 190530738 -60157116 - L1ME1 LINE L1 -16 6150 5432 5558 241 32 39 chr2 190530771 190532241 -60155613 - L1MB7 LINE L1 -19 6165 4685 1800 145 47 7 chr2 190532241 190532537 -60155317 + AluSq SINE Alu 6 313 0 5558 241 32 39 chr2 190532537 190534192 -60153662 - L1MB7 LINE L1 -1499 4685 3078 2026 127 3 7 chr2 190534192 190534484 -60153370 - AluSx SINE Alu -20 292 2 5558 241 32 39 chr2 190534484 190534880 -60152974 - L1MB7 LINE L1 -3106 3078 2680 4457 193 31 30 chr2 190534938 190536034 -60151820 + L1MC2 LINE L1 5241 6336 -8 836 242 8 23 chr2 190536048 190536312 -60151542 - L1ME1 LINE L1 -1308 4838 4579 23 54 0 0 chr2 190536546 190536583 -60151271 + AT_rich Low_complexity Low_complexity 1 37 0 353 310 7 14 chr2 190536584 190536726 -60151128 - L1MC/D LINE L1 -741 5672 5532 1682 192 52 52 chr2 190536726 190537153 -60150701 - MER76 LTR ERV -260 428 2 693 230 61 16 chr2 190537155 190537447 -60150407 - L1MC/D LINE L1 -714 5517 5213 1184 311 55 18 chr2 190537486 190538286 -60149568 - L1MC/D LINE L1 -4031 2365 1536 279 324 43 14 chr2 190539551 190539690 -60148164 + MIR SINE MIR 110 252 -10 34 0 0 0 chr2 190541597 190541631 -60146223 + AT_rich Low_complexity Low_complexity 1 34 0 330 336 150 54 chr2 190541814 190542261 -60145593 + LTR16C LTR ERVL 2 491 0 22 0 0 0 chr2 190542632 190542654 -60145200 + AT_rich Low_complexity Low_complexity 1 22 0 6818 58 42 0 chr2 190543292 190544153 -60143701 - MER11D LTR ERVK 0 897 1 21 57 0 0 chr2 190544374 190544409 -60143445 + AT_rich Low_complexity Low_complexity 1 35 0 211 200 36 36 chr2 190544528 190544583 -60143271 - L3 LINE CR1 -2 1575 1521 222 320 156 25 chr2 190544744 190544866 -60142988 - L2 LINE L2 -945 2369 2232 5937 98 0 4 chr2 190547355 190548291 -60139563 - L1PA8A LINE L1 -3 6128 5178 1891 125 16 3 chr2 190548296 190548487 -60139367 + L1P LINE L1 4862 5060 -1086 2573 105 64 7 chr2 190548487 190548529 -60139325 - MLT2A1 LTR ERVL 0 444 406 405 0 0 0 chr2 190548529 190548574 -60139280 + (TA)n Simple_repeat Simple_repeat 2 46 0 2573 105 64 7 chr2 190548574 190548951 -60138903 - MLT2A1 LTR ERVL -38 406 1 1891 125 16 3 chr2 190548951 190549070 -60138784 + L1P LINE L1 5060 5176 -970 426 216 0 0 chr2 190549452 190549540 -60138314 + AluS SINE Alu 223 310 0 28 29 0 0 chr2 190549586 190549621 -60138233 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr2 190549769 190549811 -60138043 + AT_rich Low_complexity Low_complexity 1 42 0 1525 220 43 51 chr2 190550420 190550907 -60136947 + L1 LINE L1 4879 5361 -785 302 229 0 14 chr2 190550909 190550979 -60136875 + L1MA9 LINE L1 6128 6196 -116 801 129 22 17 chr2 190550995 190551173 -60136681 + GA-rich Low_complexity Low_complexity 2 180 0 23 33 0 0 chr2 190551412 190551442 -60136412 + AT_rich Low_complexity Low_complexity 1 30 0 233 347 75 14 chr2 190551704 190551851 -60136003 + L2 LINE L2 2164 2319 -995 276 301 9 35 chr2 190552250 190552363 -60135491 + L1MEd LINE L1 1087 1196 -4923 * 489 279 82 66 chr2 190552357 190552723 -60135131 + L1MEc LINE L1 203 574 -5989 351 272 44 11 chr2 190553119 190553299 -60134555 + L1MEc LINE L1 1011 1196 -5176 * 1717 267 50 31 chr2 190553295 190553841 -60134013 + L1ME1 LINE L1 5467 6001 -333 1702 162 55 25 chr2 190553841 190554205 -60133649 + THE1C LTR MaLR 1 375 0 9510 130 23 33 chr2 190554205 190555801 -60132053 + THE1C-int LTR MaLR 1 1580 0 1719 157 58 25 chr2 190555801 190556164 -60131690 + THE1C LTR MaLR 1 375 0 1717 267 50 31 chr2 190556164 190556311 -60131543 + L1ME1 LINE L1 6000 6333 -1 667 250 79 29 chr2 190556359 190556722 -60131132 + L1MEc LINE L1 1115 1545 -4874 594 293 101 11 chr2 190556823 190557257 -60130597 + L1M4 LINE L1 4580 5052 -1094 51 79 0 0 chr2 190557663 190557777 -60130077 + AT_rich Low_complexity Low_complexity 1 114 0 558 318 63 42 chr2 190558808 190559239 -60128615 - L1MCa LINE L1 -3212 3214 2775 426 272 135 32 chr2 190559258 190559712 -60128142 - L1MCa LINE L1 -3726 2700 2176 23 54 0 0 chr2 190560134 190560171 -60127683 + AT_rich Low_complexity Low_complexity 1 37 0 1816 219 46 42 chr2 190560238 190560714 -60127140 + MLT1D LTR MaLR 28 505 0 2099 114 0 29 chr2 190560782 190561098 -60126756 - AluSg1 SINE Alu -2 307 1 183 114 0 0 chr2 190561260 190561295 -60126559 + (A)n Simple_repeat Simple_repeat 1 35 0 730 205 141 0 chr2 190561879 190562035 -60125819 - MSTD LTR MaLR 0 396 219 591 228 16 16 chr2 190562084 190562211 -60125643 - MSTD LTR MaLR -269 127 1 2049 121 7 3 chr2 190562397 190562695 -60125159 - AluSq SINE Alu -14 299 1 218 294 8 0 chr2 190562872 190562880 -60124974 + (TA)n Simple_repeat Simple_repeat 2 8 -113 1746 163 78 0 chr2 190562880 190563200 -60124654 - MER7A DNA MER2_type -3 343 1 218 294 8 0 chr2 190563200 190563310 -60124544 + (TA)n Simple_repeat Simple_repeat 8 121 0 370 43 0 0 chr2 190563312 190563358 -60124496 - MER34C LTR ERV1 -379 206 161 401 273 15 23 chr2 190563362 190563494 -60124360 - LTR48-int LTR ERV1 -4134 989 859 362 234 103 0 chr2 190563510 190563617 -60124237 - LTR48-int LTR ERV1 -4302 2029 1912 1011 196 70 79 chr2 190563673 190563918 -60123936 - LTR48-int LTR ERV1 -4329 1728 1482 225 0 0 0 chr2 190563918 190563943 -60123911 + (TA)n Simple_repeat Simple_repeat 2 26 0 1011 196 70 79 chr2 190563943 190564237 -60123617 - LTR48-int LTR ERV1 -4575 1482 296 277 259 136 80 chr2 190564363 190564649 -60123205 - LTR48-int LTR ERV1 -5990 341 40 1277 224 115 58 chr2 190564689 190565321 -60122533 - LTR48 LTR ERV1 0 644 1 213 39 0 0 chr2 190565811 190565837 -60122017 + (GA)n Simple_repeat Simple_repeat 2 27 0 1675 234 40 3 chr2 190565837 190566217 -60121637 - MLT2D LTR ERVL -20 394 1 281 236 28 69 chr2 190567239 190567311 -60120543 - L2 LINE L2 -2 3311 3243 25 0 0 0 chr2 190567400 190567425 -60120429 + AT_rich Low_complexity Low_complexity 1 25 0 818 350 71 9 chr2 190567473 190567910 -60119944 - LTR33 LTR ERVL -24 497 34 22 0 0 0 chr2 190568375 190568397 -60119457 + AT_rich Low_complexity Low_complexity 1 22 0 22 80 0 0 chr2 190568474 190568524 -60119330 + AT_rich Low_complexity Low_complexity 1 50 0 21 104 0 0 chr2 190568759 190568836 -60119018 + AT_rich Low_complexity Low_complexity 1 77 0 415 349 133 16 chr2 190569675 190569990 -60117864 + HAL1 LINE L1 1 352 -2155 436 341 28 6 chr2 190570116 190570298 -60117556 + HAL1 LINE L1 517 702 -1805 445 275 209 19 chr2 190570319 190570730 -60117124 + HAL1 LINE L1 772 1260 -1247 827 196 0 7 chr2 190570900 190571084 -60116770 - AluJb SINE Alu 0 318 136 657 159 9 0 chr2 190571110 190571223 -60116631 - FLAM_C SINE Alu 0 143 30 24 32 0 0 chr2 190572408 190572439 -60115415 + AT_rich Low_complexity Low_complexity 1 31 0 251 339 16 32 chr2 190573239 190573363 -60114491 + MIR3 SINE MIR 87 208 0 317 258 96 48 chr2 190574067 190574234 -60113620 - HERVL LTR ERVL -631 4854 4680 1331 169 19 88 chr2 190574258 190574566 -60113288 - AluJo SINE Alu -24 288 2 2338 158 39 7 chr2 190574659 190575070 -60112784 - MSTB LTR MaLR 0 426 3 525 16 0 0 chr2 190576297 190576359 -60111495 + (TC)n Simple_repeat Simple_repeat 1 62 0 2014 97 3 42 chr2 190577900 190578209 -60109645 - AluSc SINE Alu -12 297 1 3457 251 78 45 chr2 190578406 190580829 -60107025 - L1ME1 LINE L1 -10 6156 3663 283 271 47 28 chr2 190580866 190580973 -60106881 - L1ME3 LINE L1 -8 6154 6046 631 293 120 0 chr2 190580982 190581173 -60106681 - MER58A DNA MER1_type -8 216 3 8002 193 48 14 chr2 190581223 190581373 -60106481 - L1MA9 LINE L1 -1 6375 6232 237 108 0 0 chr2 190581373 190581410 -60106444 + (TG)n Simple_repeat Simple_repeat 2 38 0 8002 193 48 14 chr2 190581410 190584607 -60103247 - L1MA9 LINE L1 -144 6232 2891 610 296 98 73 chr2 190584634 190584731 -60103123 - L1MA9 LINE L1 -5559 582 489 1829 137 58 0 chr2 190584731 190584896 -60102958 - AluSx SINE Alu -3 309 155 186 71 0 0 chr2 190584896 190584924 -60102930 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1829 137 58 0 chr2 190584924 190585050 -60102804 - AluSx SINE Alu -157 155 1 610 296 98 73 chr2 190585050 190585280 -60102574 - L1MA9 LINE L1 -5652 489 247 233 111 0 0 chr2 190585291 190585327 -60102527 - L1MA9 LINE L1 -6104 37 2 1385 264 56 5 chr2 190585335 190585889 -60101965 - L1ME1 LINE L1 -2473 3673 3092 1327 233 0 10 chr2 190585890 190586186 -60101668 - AluJo SINE Alu -19 293 1 1440 218 0 7 chr2 190586197 190586490 -60101364 - AluJo SINE Alu -21 291 1 235 214 0 0 chr2 190586490 190586546 -60101308 - L1ME1 LINE L1 -3226 2920 2865 313 86 35 0 chr2 190586602 190586660 -60101194 + (TA)n Simple_repeat Simple_repeat 1 60 0 22 0 0 0 chr2 190586920 190586942 -60100912 + AT_rich Low_complexity Low_complexity 1 22 0 468 267 23 7 chr2 190587343 190587614 -60100240 + (TA)n Simple_repeat Simple_repeat 1 275 0 27 0 0 0 chr2 190588215 190588242 -60099612 + AT_rich Low_complexity Low_complexity 1 27 0 183 42 0 0 chr2 190588760 190588784 -60099070 + (TA)n Simple_repeat Simple_repeat 2 25 0 400 296 75 51 chr2 190589356 190589609 -60098245 + MER90 LTR ERV1 356 614 0 192 125 0 0 chr2 190590628 190590660 -60097194 + (TC)n Simple_repeat Simple_repeat 1 32 0 393 216 0 0 chr2 190592529 190592617 -60095237 + (TA)n Simple_repeat Simple_repeat 1 88 0 644 317 48 16 chr2 190593316 190593565 -60094289 + MIR SINE MIR 5 261 -1 689 280 217 23 chr2 190593915 190594281 -60093573 - L1MC3 LINE L1 -979 6806 6343 * 909 231 34 37 chr2 190594278 190594573 -60093281 - L1ME2 LINE L1 -10 6154 5861 302 131 0 66 chr2 190596287 190596348 -60091506 - MER58 DNA MER1_type 0 2420 2364 691 232 97 0 chr2 190596353 190596538 -60091316 - MER58 DNA MER1_type -89 252 50 248 299 62 10 chr2 190596714 190596811 -60091043 - MIR SINE MIR -147 115 14 320 193 84 12 chr2 190598122 190598205 -60089649 + MER53 DNA DNA 1 89 -100 2322 26 4 0 chr2 190598440 190598707 -60089147 - AluY SINE Alu -9 302 35 273 319 36 87 chr2 190598707 190598845 -60089009 + L2 LINE L2 3137 3267 -5 200 114 0 29 chr2 190600293 190600328 -60087526 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 389 316 65 6 chr2 190600971 190601139 -60086715 - MIR SINE MIR -2 260 83 2463 46 0 37 chr2 190602955 190603278 -60084576 - AluY SINE Alu 0 311 1 280 151 0 38 chr2 190603390 190603443 -60084411 - MLT2B2 LTR ERVL 0 515 465 225 0 0 0 chr2 190603443 190603468 -60084386 + (CCTG)n Simple_repeat Simple_repeat 2 26 0 1145 56 17 28 chr2 190603474 190603654 -60084200 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 566 260 65 77 chr2 190603667 190604163 -60083691 + L1ME1 LINE L1 3454 3943 -2203 1471 196 26 26 chr2 190604407 190604719 -60083135 + MER54B LTR ERVL 482 793 0 988 257 66 33 chr2 190604753 190606615 -60081239 + L1ME1 LINE L1 3983 6166 0 231 344 53 26 chr2 190607144 190607295 -60080559 + MER5B DNA MER1_type 1 155 -23 1855 186 29 50 chr2 190607683 190608058 -60079796 + MLT2D LTR ERVL 3 370 -44 613 62 10 21 chr2 190608058 190608154 -60079700 + (TAGA)n Simple_repeat Simple_repeat 2 96 0 1855 186 29 50 chr2 190608154 190608197 -60079657 + MLT2D LTR ERVL 370 412 -2 21 0 0 0 chr2 190608446 190608467 -60079387 + AT_rich Low_complexity Low_complexity 1 21 0 848 311 117 22 chr2 190609336 190609745 -60078109 - LTR16A LTR ERVL -1 449 2 914 320 47 40 chr2 190610069 190610760 -60077094 - ERVL LTR ERVL -301 5149 4478 711 299 46 18 chr2 190610975 190611256 -60076598 - HERV16-B1 LTR ERVL -4588 408 120 435 279 149 0 chr2 190611501 190611655 -60076199 - LTR16A LTR ERVL -273 177 1 890 300 11 22 chr2 190611873 190612150 -60075704 + Zaphod DNA AcHobo 3 276 -3755 419 223 256 3 chr2 190612169 190612551 -60075303 + Zaphod DNA AcHobo 512 990 -3041 * 685 235 96 0 chr2 190612549 190612809 -60075045 + Zaphod DNA AcHobo 3595 3879 -152 968 165 97 4 chr2 190612889 190613101 -60074753 + MLT2C2 LTR ERVL 160 464 0 423 275 28 7 chr2 190613101 190613242 -60074612 + MER115 DNA AcHobo 546 689 -4 21 0 0 0 chr2 190613352 190613373 -60074481 + AT_rich Low_complexity Low_complexity 1 21 0 648 262 23 17 chr2 190613453 190613625 -60074229 + MLT1A1 LTR MaLR 189 361 -4 615 165 9 0 chr2 190613634 190613743 -60074111 + MLT1A1-int LTR MaLR 6 115 -1620 1367 228 161 27 chr2 190613746 190614112 -60073742 - MLT2B1 LTR ERVL -61 459 33 2200 111 67 0 chr2 190614112 190614453 -60073401 - THE1B LTR MaLR 0 364 1 1367 228 161 27 chr2 190614453 190614490 -60073364 - MLT2B1 LTR ERVL -487 33 2 288 280 98 76 chr2 190614502 190614738 -60073116 - L2 LINE L2 -216 3097 2857 385 191 19 0 chr2 190614844 190614949 -60072905 + GA-rich Low_complexity Low_complexity 2 108 0 225 356 67 52 chr2 190615108 190615375 -60072479 - L2 LINE L2 -758 2556 2286 208 237 0 0 chr2 190615499 190615537 -60072317 + (CA)n Simple_repeat Simple_repeat 2 39 0 245 204 19 0 chr2 190617902 190617956 -60069898 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 1147 183 81 84 chr2 190618405 190618728 -60069126 - L1MA9 LINE L1 -442 5870 5549 * 1516 186 96 19 chr2 190618725 190619101 -60068753 + L1MA9 LINE L1 5870 6274 -38 26 0 0 0 chr2 190620195 190620221 -60067633 + AT_rich Low_complexity Low_complexity 1 26 0 761 112 60 0 chr2 190620383 190620499 -60067355 - PABL_A LTR ERV1 -45 615 493 22 0 0 0 chr2 190620763 190620785 -60067069 + AT_rich Low_complexity Low_complexity 1 22 0 51 70 0 0 chr2 190620902 190621002 -60066852 + AT_rich Low_complexity Low_complexity 1 100 0 450 269 90 0 chr2 190621869 190622003 -60065851 + MIR SINE MIR 104 249 -13 201 211 0 0 chr2 190623331 190623369 -60064485 - L2 LINE L2 -12 3301 3264 507 295 32 46 chr2 190623734 190623951 -60063903 + MIR SINE MIR 46 259 -3 3227 175 25 3 chr2 190624169 190624758 -60063096 - MER7C DNA MER2_type 0 602 1 24 0 0 0 chr2 190624978 190625002 -60062852 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 190625077 190625102 -60062752 + AT_rich Low_complexity Low_complexity 1 25 0 258 31 0 0 chr2 190625131 190625163 -60062691 + L1PB4 LINE L1 5334 5365 -796 * 11555 111 18 1 chr2 190625159 190626911 -60060943 - L1PA7 LINE L1 -1846 4300 2519 7613 92 2 0 chr2 190626911 190628749 -60059105 + L1PA7 LINE L1 4303 6143 -11 23 0 0 0 chr2 190628749 190628772 -60059082 + AT_rich Low_complexity Low_complexity 1 23 0 3726 194 28 12 chr2 190628819 190629596 -60058258 + L1PB4 LINE L1 5353 6142 -14 356 305 14 25 chr2 190630461 190630743 -60057111 + L1M4 LINE L1 3573 3851 -2295 12522 189 30 35 chr2 190630781 190632540 -60055314 + L1M1 LINE L1 15 1783 -5782 377 20 20 0 chr2 190632540 190632590 -60055264 + (CA)n Simple_repeat Simple_repeat 2 52 0 212 0 36 0 chr2 190632589 190632617 -60055237 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 12522 189 30 35 chr2 190632590 190633448 -60054406 + L1M1 LINE L1 1783 2590 -4975 2947 176 5 2 chr2 190633451 190634176 -60053678 + L1MA2 LINE L1 4767 5492 -743 627 203 0 8 chr2 190634176 190634299 -60053555 - MER52A LTR ERV1 0 1755 1634 * 3549 183 84 27 chr2 190634295 190635143 -60052711 - MER52A LTR ERV1 -780 975 3 5043 131 6 14 chr2 190635143 190635968 -60051886 + L1MA2 LINE L1 5487 6304 0 22 0 0 0 chr2 190635968 190635990 -60051864 + AT_rich Low_complexity Low_complexity 1 22 0 373 264 46 67 chr2 190635990 190636274 -60051580 + L1M4 LINE L1 3890 4167 -1979 32 67 0 0 chr2 190636386 190636446 -60051408 + AT_rich Low_complexity Low_complexity 1 60 0 649 281 68 37 chr2 190636539 190637051 -60050803 + L1M4 LINE L1 4696 5223 -923 508 257 56 39 chr2 190637764 190637943 -60049911 + MIR SINE MIR 17 198 -64 21 0 0 0 chr2 190638077 190638098 -60049756 + AT_rich Low_complexity Low_complexity 1 21 0 474 196 59 0 chr2 190638883 190638985 -60048869 + L1MB1 LINE L1 6060 6167 -1 391 184 10 10 chr2 190639128 190639231 -60048623 + (TA)n Simple_repeat Simple_repeat 1 103 0 225 196 0 0 chr2 190639323 190639379 -60048475 + (TA)n Simple_repeat Simple_repeat 2 57 0 35 54 0 0 chr2 190639533 190639589 -60048265 + AT_rich Low_complexity Low_complexity 1 56 0 229 182 0 0 chr2 190640755 190640799 -60047055 + L1M LINE L1 5385 5428 -693 28 61 0 0 chr2 190640950 190640999 -60046855 + AT_rich Low_complexity Low_complexity 1 49 0 25 65 0 0 chr2 190642185 190642231 -60045623 + AT_rich Low_complexity Low_complexity 1 46 0 180 228 70 0 chr2 190643177 190643234 -60044620 - MIR SINE MIR -46 216 156 275 321 80 49 chr2 190644315 190644704 -60043150 + L1MCc LINE L1 19 419 -6004 1610 286 60 17 chr2 190645116 190646162 -60041692 + L1MCc LINE L1 922 2031 -4887 983 266 57 15 chr2 190646187 190646589 -60041265 + L1MCc LINE L1 2331 2749 -4373 1345 148 9 0 chr2 190646589 190646799 -60041055 + AluJo SINE Alu 87 298 -14 456 256 78 41 chr2 190646882 190647101 -60040753 + L1MCc LINE L1 2843 3069 -4053 22 0 0 0 chr2 190647446 190647468 -60040386 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr2 190647621 190647661 -60040193 + AT_rich Low_complexity Low_complexity 1 40 0 32 57 0 0 chr2 190647704 190647757 -60040097 + AT_rich Low_complexity Low_complexity 1 53 0 33 73 0 0 chr2 190649117 190649185 -60038669 + AT_rich Low_complexity Low_complexity 1 68 0 5431 120 39 3 chr2 190649298 190649639 -60038215 + L1PA16 LINE L1 5095 5423 -743 1674 163 0 4 chr2 190649639 190649909 -60037945 + AluSx SINE Alu 5 273 -39 5431 120 39 3 chr2 190649909 190650607 -60037247 + L1PA16 LINE L1 5423 6165 -1 543 274 130 4 chr2 190650699 190650966 -60036888 - L1ME1 LINE L1 -115 6051 5752 2275 268 114 52 chr2 190650977 190652353 -60035501 - L1MDb LINE L1 -4193 2213 784 273 189 14 14 chr2 190652639 190652713 -60035141 + (TA)n Simple_repeat Simple_repeat 2 75 0 230 0 33 0 chr2 190652962 190652992 -60034862 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 2170 99 0 0 chr2 190653323 190653615 -60034239 - AluSg SINE Alu -18 292 1 572 82 0 10 chr2 190653663 190653760 -60034094 + (TA)n Simple_repeat Simple_repeat 2 97 0 30 0 0 24 chr2 190655090 190655108 -60032746 + AT_rich Low_complexity Low_complexity 1 18 -22 2242 63 3 3 chr2 190655108 190655395 -60032459 + AluY SINE Alu 1 287 -24 30 0 0 24 chr2 190655395 190655417 -60032437 + AT_rich Low_complexity Low_complexity 18 40 0 1093 157 24 0 chr2 190655417 190655627 -60032227 - L1MA6 LINE L1 -4 6296 6082 5169 173 13 37 chr2 190656473 190657679 -60030175 + L1MA10 LINE L1 5156 6326 -8 209 184 0 0 chr2 190658062 190658100 -60029754 + (TGG)n Simple_repeat Simple_repeat 1 38 0 419 311 55 6 chr2 190658106 190658289 -60029565 - HAL1 LINE L1 -790 1717 1526 226 262 48 71 chr2 190658849 190658975 -60028879 - HAL1 LINE L1 -1577 930 808 2147 91 47 0 chr2 190660129 190660425 -60027429 - AluSg SINE Alu 0 310 1 378 0 0 0 chr2 190660575 190660617 -60027237 + (TG)n Simple_repeat Simple_repeat 2 43 0 1601 261 139 19 chr2 190660763 190661568 -60026286 - L1ME1 LINE L1 -5 6161 5260 366 243 67 33 chr2 190661637 190661847 -60026007 + L1MC/D LINE L1 1233 1449 -4947 * 1796 236 35 15 chr2 190661826 190662364 -60025490 + L1MC/D LINE L1 3967 4515 -1700 967 190 33 15 chr2 190662359 190662669 -60025185 + L1MC/D LINE L1 5246 5557 -743 * 28 71 0 0 chr2 190663823 190663879 -60023975 + AT_rich Low_complexity Low_complexity 1 56 0 1504 179 42 3 chr2 190664177 190664523 -60023331 - L1PA16 LINE L1 -1 6164 5782 1050 77 7 7 chr2 190664520 190664675 -60023179 - L1P4 LINE L1 -655 5511 5357 * 2444 201 20 0 chr2 190664675 190665218 -60022636 + L1 LINE L1 4086 4639 -1507 23 0 0 0 chr2 190666063 190666086 -60021768 + AT_rich Low_complexity Low_complexity 1 23 0 486 49 0 0 chr2 190666856 190666917 -60020937 + (TA)n Simple_repeat Simple_repeat 1 61 0 2432 138 3 0 chr2 190668011 190668374 -60019480 - THE1B LTR MaLR 0 364 1 544 232 16 0 chr2 190668374 190668499 -60019355 + MLT1B LTR MaLR 264 390 0 23 33 0 0 chr2 190668854 190668884 -60018970 + AT_rich Low_complexity Low_complexity 1 30 0 325 345 136 11 chr2 190670682 190670873 -60016981 + MIR SINE MIR 43 257 -5 2204 100 0 0 chr2 190671013 190671304 -60016550 - AluSg SINE Alu -19 291 1 23 33 0 0 chr2 190671445 190671475 -60016379 + AT_rich Low_complexity Low_complexity 1 30 0 227 319 71 35 chr2 190671909 190672022 -60015832 + L2 LINE L2 3195 3311 -2 28 29 0 0 chr2 190672038 190672073 -60015781 + AT_rich Low_complexity Low_complexity 1 35 0 635 228 39 6 chr2 190672239 190672413 -60015441 - L1PA16 LINE L1 -536 5618 5438 379 290 61 43 chr2 190672429 190672660 -60015194 + L1ME3A LINE L1 5104 5338 -808 267 136 23 23 chr2 190672782 190672870 -60014984 + (TAAA)n Simple_repeat Simple_repeat 1 88 0 281 298 89 6 chr2 190672881 190673049 -60014805 + L1ME3A LINE L1 5488 5669 -452 752 309 24 7 chr2 190673070 190673365 -60014489 + L1ME3A LINE L1 5640 5939 -231 6295 209 106 35 chr2 190674051 190675617 -60012237 - MER52A LTR ERV1 0 1755 8 1944 171 13 29 chr2 190675844 190676225 -60011629 - THE1C LTR MaLR 0 375 1 247 177 0 51 chr2 190676586 190676665 -60011189 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 22 35 0 0 chr2 190677480 190677509 -60010345 + AT_rich Low_complexity Low_complexity 1 29 0 310 233 93 53 chr2 190677890 190678040 -60009814 + MER103 DNA DNA 5 160 -6 22 0 0 0 chr2 190678206 190678228 -60009626 + AT_rich Low_complexity Low_complexity 1 22 0 2346 141 11 0 chr2 190678635 190679004 -60008850 + THE1C LTR MaLR 3 375 0 6989 132 50 50 chr2 190679004 190680236 -60007618 + THE1C-int LTR MaLR 1 1232 -348 966 138 7 0 chr2 190680236 190680388 -60007466 + THE1C LTR MaLR 223 375 0 1790 46 0 18 chr2 190680826 190681075 -60006779 + AluY SINE Alu 69 313 0 31 58 0 0 chr2 190683129 190683181 -60004673 + AT_rich Low_complexity Low_complexity 1 52 0 2125 95 0 26 chr2 190683743 190684047 -60003807 - AluSg SINE Alu -14 296 1 230 267 56 44 chr2 190684248 190684338 -60003516 - L2 LINE L2 0 3272 3182 23 0 0 0 chr2 190684873 190684896 -60002958 + AT_rich Low_complexity Low_complexity 1 23 0 4456 127 73 47 chr2 190686062 190687493 -60000361 - pTR5 LTR ERV1 0 2438 761 2097 126 0 0 chr2 190688029 190688323 -59999531 - AluSx SINE Alu -18 294 1 233 161 92 92 chr2 190689341 190689428 -59998426 + MER97c DNA MER1_type? 1004 1090 0 241 238 75 12 chr2 190689546 190689626 -59998228 + L1M4 LINE L1 4519 4603 -1543 32 26 0 0 chr2 190690006 190690045 -59997809 + AT_rich Low_complexity Low_complexity 1 39 0 238 203 17 119 chr2 190690091 190690209 -59997645 + L1MC4 LINE L1 6614 6719 -1323 373 217 11 33 chr2 190690235 190690419 -59997435 + (TA)n Simple_repeat Simple_repeat 1 180 0 2224 183 59 9 chr2 190691153 190691595 -59996259 + MER70A LTR ERVL 5 468 -4 216 0 0 0 chr2 190691715 190691739 -59996115 + (A)n Simple_repeat Simple_repeat 1 24 0 420 130 0 0 chr2 190691947 190692016 -59995838 + (TC)n Simple_repeat Simple_repeat 2 70 0 1118 176 137 54 chr2 190692815 190693093 -59994761 + AluJo SINE Alu 2 302 0 512 90 0 13 chr2 190694192 190694270 -59993584 + MADE1 DNA Mariner 4 80 0 366 23 0 0 chr2 190694758 190694801 -59993053 + (CA)n Simple_repeat Simple_repeat 2 44 0 501 143 11 0 chr2 190694805 190694896 -59992958 + L1M2 LINE L1 5580 5671 -620 24 0 0 0 chr2 190694923 190694947 -59992907 + AT_rich Low_complexity Low_complexity 1 24 0 253 341 0 0 chr2 190695018 190695100 -59992754 + L2 LINE L2 2194 2275 -1039 1652 150 54 85 chr2 190695586 190695699 -59992155 - THE1C LTR MaLR 0 375 260 3363 100 47 4 chr2 190695699 190696189 -59991665 + MER9 LTR ERVK 1 511 0 1652 150 54 85 chr2 190696189 190696462 -59991392 - THE1C LTR MaLR -115 260 1 462 305 47 45 chr2 190696894 190697251 -59990603 - MLT1I LTR MaLR -33 376 50 341 329 92 6 chr2 190698239 190698403 -59989451 - MIR SINE MIR -11 251 74 278 231 0 15 chr2 190698957 190699022 -59988832 + L2 LINE L2 1346 1409 -1905 306 237 26 0 chr2 190699025 190699101 -59988753 - MIR SINE MIR -2 260 183 7111 38 3 8 chr2 190699226 190700611 -59987243 - L1PA4 LINE L1 -11 6144 4753 4099 43 18 0 chr2 190700611 190701124 -59986730 + L1PA4 LINE L1 4245 4766 -1380 2167 141 68 16 chr2 190701332 190701772 -59986082 - L1MA8 LINE L1 -6 6285 5823 717 319 143 42 chr2 190701857 190702635 -59985219 + L2 LINE L2 1853 2708 -606 246 317 66 92 chr2 190702763 190703066 -59984788 + L2 LINE L2 3019 3313 0 243 323 31 21 chr2 190703814 190703910 -59983944 - L2 LINE L2 -1387 1927 1831 664 156 39 0 chr2 190705948 190706076 -59981778 + L1MA9 LINE L1 6180 6312 0 201 189 0 19 chr2 190706087 190706140 -59981714 + A-rich Low_complexity Low_complexity 2 53 0 399 227 0 0 chr2 190706188 190706285 -59981569 + (TA)n Simple_repeat Simple_repeat 1 97 0 26 30 0 0 chr2 190707056 190707089 -59980765 + AT_rich Low_complexity Low_complexity 1 33 0 504 163 3 11 chr2 190707159 190707268 -59980586 + L1MC3 LINE L1 5862 5967 -201 320 93 0 0 chr2 190707375 190707418 -59980436 - L1P LINE L1 -4949 1197 1155 828 40 0 0 chr2 190707418 190707518 -59980336 + L1PA5 LINE L1 6049 6148 -6 2336 176 139 112 chr2 190707950 190708538 -59979316 - L1MC3 LINE L1 -2 7783 7069 252 351 0 0 chr2 190708538 190708632 -59979222 - MLT1F1 LTR MaLR -442 125 32 2336 176 139 112 chr2 190708632 190708873 -59978981 - L1MC3 LINE L1 -716 7069 6836 269 221 0 30 chr2 190708894 190708994 -59978860 - AluJ/monomer SINE Alu 0 302 241 474 165 0 25 chr2 190708994 190709110 -59978744 - L1MC3 LINE L1 -230 5939 5830 22 35 0 0 chr2 190709141 190709170 -59978684 + AT_rich Low_complexity Low_complexity 1 29 0 12994 231 25 24 chr2 190709398 190714457 -59973397 - L1PA16 LINE L1 -317 7287 2183 506 380 49 30 chr2 190714727 190715093 -59972761 - L1PA16 LINE L1 -6414 1160 788 520 295 119 4 chr2 190715470 190715714 -59972140 + LTR33 LTR ERVL 7 278 -243 21 0 0 0 chr2 190716353 190716374 -59971480 + AT_rich Low_complexity Low_complexity 1 21 0 297 99 74 0 chr2 190716385 190716466 -59971388 + (TA)n Simple_repeat Simple_repeat 2 88 0 2013 122 3 7 chr2 190717089 190717403 -59970451 - AluSq SINE Alu 0 313 1 21 57 0 0 chr2 190718272 190718307 -59969547 + AT_rich Low_complexity Low_complexity 1 35 0 529 277 11 69 chr2 190718472 190718660 -59969194 - MIR3 SINE MIR -16 192 16 1549 206 21 27 chr2 190719262 190719636 -59968218 - L1MB7 LINE L1 -58 6126 5755 1841 243 105 15 chr2 190719640 190720250 -59967604 - L1MB7 LINE L1 -2136 4010 3346 437 271 78 10 chr2 190721745 190721937 -59965917 - L1ME LINE L1 -301 5820 5616 2156 117 0 7 chr2 190722417 190722716 -59965138 + AluSq SINE Alu 1 297 -16 1995 91 4 4 chr2 190722954 190723217 -59964637 + AluSg SINE Alu 21 283 -27 524 29 14 0 chr2 190723217 190723287 -59964567 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 524 285 76 40 chr2 190723369 190723765 -59964089 - L1MB7 LINE L1 -3086 3060 2651 1926 293 37 38 chr2 190724173 190724908 -59962946 + L1M2a LINE L1 5 738 -6430 2108 115 9 16 chr2 190724935 190725023 -59962831 - L1P4 LINE L1 -635 5528 5441 2509 113 3 18 chr2 190725023 190725404 -59962450 - THE1C LTR MaLR 0 375 1 2108 115 9 16 chr2 190725404 190725831 -59962023 - L1P4 LINE L1 -722 5441 5017 * 5267 170 6 26 chr2 190725826 190726587 -59961267 - L1M2 LINE L1 -743 5403 4724 2208 116 3 0 chr2 190726587 190726889 -59960965 - AluSc SINE Alu -6 303 1 5267 170 6 26 chr2 190726889 190727289 -59960565 - L1M2 LINE L1 -1422 4724 4318 4612 139 45 37 chr2 190727292 190728263 -59959591 - L1PA16 LINE L1 0 6166 5193 2174 135 16 32 chr2 190728265 190728635 -59959219 - THE1B LTR MaLR 0 364 1 10859 106 12 11 chr2 190728635 190729786 -59958068 - THE1B-int LTR MaLR 0 1580 425 1982 127 3 0 chr2 190729786 190730107 -59957747 + AluSx SINE Alu 1 322 0 10859 106 12 11 chr2 190730107 190730533 -59957321 - THE1B-int LTR MaLR -1155 425 1 1156 153 19 37 chr2 190730533 190730749 -59957105 - THE1B LTR MaLR 0 364 153 581 74 37 0 chr2 190730750 190730831 -59957023 + AluY SINE Alu 208 291 -20 207 0 0 0 chr2 190730840 190730863 -59956991 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 865 112 16 144 chr2 190730863 190731051 -59956803 - THE1B LTR MaLR -200 164 1 342 310 21 16 chr2 190731956 190732131 -59955723 + MLT1H LTR MaLR 29 197 -352 263 103 22 51 chr2 190732445 190732507 -59955347 - MLT2C1 LTR ERVL 0 554 458 1610 200 48 0 chr2 190732574 190732904 -59954950 - MLT2C1 LTR ERVL -49 348 3 191 312 54 32 chr2 190733822 190733915 -59953939 + L2 LINE L2 2791 2885 -429 625 280 39 0 chr2 190734004 190734186 -59953668 - MER5A DNA MER1_type 0 189 1 2133 110 3 0 chr2 190734438 190734737 -59953117 + AluSc SINE Alu 1 300 -9 339 317 41 50 chr2 190735543 190735764 -59952090 - HERVL LTR ERVL -1076 4578 4360 1165 294 60 54 chr2 190736593 190737175 -59950679 - MLT1E LTR MaLR 0 579 10 1791 147 174 11 chr2 190737185 190737553 -59950301 - MSTA LTR MaLR 0 428 1 1782 200 40 42 chr2 190739317 190739816 -59948038 - L1MA9 LINE L1 -38 6274 5777 225 65 0 0 chr2 190739842 190739873 -59947981 + (CA)n Simple_repeat Simple_repeat 2 32 0 1087 254 13 0 chr2 190739874 190740106 -59947748 - MER8 DNA MER2_type -3 236 2 237 213 0 0 chr2 190740118 190740226 -59947628 + (TA)n Simple_repeat Simple_repeat 1 108 0 4021 186 55 19 chr2 190740228 190741600 -59946254 - L1MA9 LINE L1 -523 5789 4371 27 0 0 0 chr2 190741842 190741869 -59945985 + AT_rich Low_complexity Low_complexity 1 27 0 57 28 0 0 chr2 190742263 190742334 -59945520 + AT_rich Low_complexity Low_complexity 1 71 0 23 54 0 0 chr2 190742450 190742487 -59945367 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 190742654 190742675 -59945179 + AT_rich Low_complexity Low_complexity 1 21 0 290 263 0 32 chr2 190742771 190742866 -59944988 - LTR33 LTR ERVL -2 519 428 266 309 29 29 chr2 190742990 190743126 -59944728 - LTR33 LTR ERVL -305 216 81 487 125 11 23 chr2 190743252 190743340 -59944514 - MER67D LTR ERV1 -427 87 1 308 177 44 172 chr2 190743531 190743734 -59944120 - L1M4b LINE L1 -5699 1160 984 268 301 232 32 chr2 190743886 190744132 -59943722 - L1M4b LINE L1 -6553 306 12 29 0 0 0 chr2 190745424 190745453 -59942401 + AT_rich Low_complexity Low_complexity 1 29 0 608 182 0 0 chr2 190745467 190745577 -59942277 - FRAM SINE Alu -15 161 52 29 0 0 0 chr2 190746198 190746227 -59941627 + AT_rich Low_complexity Low_complexity 1 29 0 1491 167 72 4 chr2 190746237 190746532 -59941322 - AluJo SINE Alu 0 313 1 348 288 51 12 chr2 190747237 190747431 -59940423 - L1ME LINE L1 -679 5491 5288 263 230 11 0 chr2 190747578 190747665 -59940189 + GA-rich Low_complexity Low_complexity 3 90 0 230 108 24 84 chr2 190748639 190748722 -59939132 + (TATAA)n Simple_repeat Simple_repeat 5 82 0 216 0 0 0 chr2 190748900 190748924 -59938930 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 1545 167 8 0 chr2 190748959 190749210 -59938644 + AluJo SINE Alu 49 301 -11 25 0 0 0 chr2 190750115 190750140 -59937714 + AT_rich Low_complexity Low_complexity 1 25 0 308 288 40 28 chr2 190751715 190751892 -59935962 + L1M4 LINE L1 4396 4574 -1572 198 0 0 0 chr2 190751963 190751985 -59935869 + (TA)n Simple_repeat Simple_repeat 1 22 0 23 0 0 0 chr2 190752262 190752285 -59935569 + AT_rich Low_complexity Low_complexity 1 23 0 387 376 72 17 chr2 190752308 190752489 -59935365 + MER91A DNA MER1_type 2 192 -4 237 180 120 70 chr2 190752489 190752589 -59935265 + L1ME LINE L1 5309 5413 -2395 316 272 144 11 chr2 190752712 190752892 -59934962 + L1ME LINE L1 5545 5748 -373 804 300 152 43 chr2 190753019 190753479 -59934375 - L2 LINE L2 0 3313 2804 532 269 43 16 chr2 190753701 190753887 -59933967 - L2 LINE L2 -554 2760 2570 2335 185 48 2 chr2 190754347 190754807 -59933047 + MER31A LTR ERV1 1 481 -4 3196 32 0 0 chr2 190756644 190757024 -59930830 + L1PA4 LINE L1 5773 6152 -3 198 226 0 48 chr2 190757688 190757750 -59930104 - MIR SINE MIR -40 222 164 299 282 29 29 chr2 190758003 190758106 -59929748 - MIR SINE MIR -111 151 49 216 97 0 0 chr2 190758657 190758688 -59929166 + (TAG)n Simple_repeat Simple_repeat 2 32 0 8859 50 3 0 chr2 190759802 190760906 -59926948 - L1P LINE L1 -1285 4861 3755 7149 52 1 0 chr2 190760906 190762238 -59925616 + L1PA5 LINE L1 4822 6154 0 43 0 0 0 chr2 190762238 190762281 -59925573 + AT_rich Low_complexity Low_complexity 1 43 0 3047 167 27 34 chr2 190762563 190762910 -59924944 + LTR24C LTR ERV1 1 342 -293 1139 138 30 5 chr2 190762910 190763113 -59924741 - L1PA16 LINE L1 -9 6157 5950 3047 167 27 34 chr2 190763113 190763405 -59924449 + LTR24C LTR ERV1 342 635 0 571 342 75 14 chr2 190763673 190763875 -59923979 + L2 LINE L2 2013 2246 -1068 920 239 109 43 chr2 190763875 190764197 -59923657 + MER2 DNA MER2_type 1 343 -1 571 342 75 14 chr2 190764197 190764339 -59923515 + L2 LINE L2 2246 2378 -936 3496 162 60 7 chr2 190764361 190765205 -59922649 - Tigger3b DNA MER2_type -274 957 26 22 0 0 0 chr2 190765431 190765453 -59922401 + AT_rich Low_complexity Low_complexity 1 22 0 527 219 24 0 chr2 190765811 190765934 -59921920 - L1MC/D LINE L1 -676 5683 5558 830 207 63 22 chr2 190766004 190766169 -59921685 + L1MC/D LINE L1 5099 5256 -934 2817 3 0 0 chr2 190766169 190766477 -59921377 + AluYa5 SINE Alu 1 308 -3 830 207 63 22 chr2 190766477 190766652 -59921202 + L1MC/D LINE L1 5256 5447 -743 2707 221 122 24 chr2 190766706 190767545 -59920309 - L1MA6 LINE L1 -784 5362 4442 1037 196 7 0 chr2 190767534 190767760 -59920094 + L1MA6 LINE L1 5360 5589 -581 * 31 48 0 16 chr2 190767765 190767791 -59920063 + AT_rich Low_complexity Low_complexity 1 26 -36 3262 187 34 30 chr2 190767791 190768536 -59919318 + L1MA6 LINE L1 5553 6300 0 31 48 0 16 chr2 190768536 190768572 -59919282 + AT_rich Low_complexity Low_complexity 26 62 0 423 167 25 8 chr2 190768591 190768675 -59919179 + L1MC/D LINE L1 5468 5546 -751 1076 222 87 58 chr2 190768691 190769070 -59918784 + MLT1B LTR MaLR 1 390 0 2442 286 57 53 chr2 190771624 190773075 -59914779 + L1M4b LINE L1 12 1724 -5414 1409 234 3 6 chr2 190773075 190773387 -59914467 + AluJb SINE Alu 1 311 -1 2442 286 57 53 chr2 190773387 190774196 -59913658 + L1M4b LINE L1 1724 2528 -4610 912 244 102 38 chr2 190774197 190774447 -59913407 + MLT1B LTR MaLR 1 305 -162 2056 112 11 0 chr2 190774447 190774732 -59913122 - AluSc SINE Alu -21 288 1 912 244 102 38 chr2 190774732 190774898 -59912956 + MLT1B LTR MaLR 305 459 -8 3609 133 37 9 chr2 190774967 190775540 -59912314 + L1P3 LINE L1 23 611 -5264 868 125 0 8 chr2 190775546 190775674 -59912180 + L1PA8A LINE L1 5993 6119 -12 2024 145 0 0 chr2 190775779 190776083 -59911771 + AluSx SINE Alu 1 304 -8 1588 242 22 5 chr2 190776356 190776773 -59911081 - L1 LINE L1 -916 5932 5509 * 6323 206 32 4 chr2 190776748 190779000 -59908854 - L1 LINE L1 -2972 3876 1560 1243 284 58 45 chr2 190779623 190779906 -59907948 - L1MCc LINE L1 -4253 2689 2411 230 0 33 0 chr2 190779906 190779936 -59907918 + (TG)n Simple_repeat Simple_repeat 1 31 0 1243 284 58 45 chr2 190779936 190780220 -59907634 - L1MCc LINE L1 -4531 2411 2132 1855 136 31 50 chr2 190780220 190780602 -59907252 - THE1C LTR MaLR 0 375 1 1243 284 58 45 chr2 190780602 190781371 -59906483 - L1MCc LINE L1 -4810 2132 866 24 0 0 0 chr2 190781774 190781798 -59906056 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 190781857 190781882 -59905972 + AT_rich Low_complexity Low_complexity 1 25 0 25 75 0 0 chr2 190782648 190782701 -59905153 + AT_rich Low_complexity Low_complexity 1 53 0 288 0 0 0 chr2 190782783 190782815 -59905039 + (CA)n Simple_repeat Simple_repeat 1 32 0 1187 120 0 0 chr2 190782845 190783032 -59904822 - AluSg/x SINE Alu 0 316 130 225 0 0 0 chr2 190783032 190783057 -59904797 + (TA)n Simple_repeat Simple_repeat 2 26 0 2634 47 0 6 chr2 190783057 190783376 -59904478 - AluYb8 SINE Alu -1 317 1 22 35 0 0 chr2 190784496 190784525 -59903329 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr2 190784807 190784843 -59903011 + AT_rich Low_complexity Low_complexity 1 36 0 8861 182 16 65 chr2 190786186 190788416 -59899438 + L1MA6 LINE L1 3239 5357 -789 3026 32 0 11 chr2 190788433 190788809 -59899045 - L1PA4 LINE L1 -1343 4803 4432 7287 37 6 0 chr2 190788809 190790153 -59897701 + L1PA4 LINE L1 4804 6154 -1 1439 162 36 0 chr2 190790168 190790421 -59897433 + L1MA6 LINE L1 5375 5636 -655 1086 240 43 24 chr2 190790422 190790751 -59897103 + L1MA7 LINE L1 5946 6280 -11 2366 47 4 0 chr2 190790857 190791135 -59896719 + AluY SINE Alu 28 306 -5 1967 161 33 25 chr2 190791831 190792192 -59895662 + THE1B LTR MaLR 1 364 0 2209 186 50 0 chr2 190792213 190792967 -59894887 - L1MA6 LINE L1 -614 5686 4896 2423 186 118 2 chr2 190792968 190793484 -59894370 + L1MA6 LINE L1 5703 6278 -22 28 29 0 0 chr2 190793493 190793528 -59894326 + AT_rich Low_complexity Low_complexity 1 35 0 2058 116 7 0 chr2 190793528 190793858 -59893996 + AluSx SINE Alu 1 332 0 1870 199 36 0 chr2 190794431 190794792 -59893062 - LOR1b LTR ERV1 0 461 88 2234 111 30 18 chr2 190794801 190795154 -59892700 - L1PB1 LINE L1 -6 6145 5798 315 0 0 0 chr2 190795154 190795189 -59892665 + (TG)n Simple_repeat Simple_repeat 2 36 0 * 489 34 0 0 chr2 190795188 190795247 -59892607 + (TA)n Simple_repeat Simple_repeat 2 60 0 2234 111 30 18 chr2 190795189 190795516 -59892338 - L1PB1 LINE L1 -353 5798 5324 341 184 103 23 chr2 190795516 190795603 -59892251 - LOR1b LTR ERV1 -367 94 1 21 57 0 0 chr2 190796698 190796733 -59891121 + AT_rich Low_complexity Low_complexity 1 35 0 361 292 56 0 chr2 190796927 190797088 -59890766 - L1M4 LINE L1 -1742 4404 4235 415 278 30 47 chr2 190797212 190797381 -59890473 + HAL1b LINE L1 374 539 -809 1890 153 0 28 chr2 190797395 190797715 -59890139 + AluSx SINE Alu 1 311 -1 301 282 128 17 chr2 190797743 190797860 -59889994 + L1MC/D LINE L1 5490 5619 -2189 36 23 0 0 chr2 190799784 190799827 -59888027 + AT_rich Low_complexity Low_complexity 1 43 0 24 32 0 0 chr2 190800351 190800382 -59887472 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr2 190801265 190801290 -59886564 + AT_rich Low_complexity Low_complexity 1 25 0 39 84 0 0 chr2 190802345 190802440 -59885414 + AT_rich Low_complexity Low_complexity 1 95 0 615 244 105 34 chr2 190802799 190803008 -59884846 - MER58A DNA MER1_type 0 224 1 1960 157 0 0 chr2 190803500 190803793 -59884061 - AluSx SINE Alu -19 293 1 6045 144 31 18 chr2 190804787 190806344 -59881510 - MER61A-int LTR ERV1 -1023 4817 1655 326 47 0 0 chr2 190806346 190806389 -59881465 - MER61A-int LTR ERV1 -3855 1362 1320 2907 196 70 18 chr2 190806421 190807093 -59880761 - MER61A-int LTR ERV1 -4510 707 1 1569 173 64 24 chr2 190807093 190807423 -59880431 - MER61A LTR ERV1 0 343 1 534 252 0 14 chr2 190807438 190807585 -59880269 - L1MC5 LINE L1 -102 7859 7715 1950 146 3 19 chr2 190807600 190807915 -59879939 - AluSg SINE Alu 0 310 1 325 217 23 47 chr2 190807975 190808104 -59879750 - L1MC5 LINE L1 -384 7577 7452 2028 338 85 30 chr2 190808237 190809374 -59878480 - L2 LINE L2 -1197 2117 918 219 360 88 9 chr2 190809783 190809897 -59877957 + L2 LINE L2 3136 3258 -14 441 216 27 7 chr2 190809935 190810083 -59877771 + GA-rich Low_complexity Low_complexity 2 152 0 392 382 21 11 chr2 190810167 190810353 -59877501 + L3 LINE CR1 1360 1547 -30 2205 116 0 3 chr2 190810416 190810717 -59877137 - AluSq SINE Alu -13 300 1 222 37 0 0 chr2 190811700 190811727 -59876127 + (TG)n Simple_repeat Simple_repeat 2 28 0 498 304 6 28 chr2 190811910 190812091 -59875763 - L2 LINE L2 -698 2616 2440 2613 267 55 38 chr2 190812240 190812564 -59875290 - L1MCb LINE L1 -4851 1194 877 5063 165 27 32 chr2 190812564 190813638 -59874216 + MER11C LTR ERVK 3 1071 0 2613 267 55 38 chr2 190813638 190814928 -59872926 - L1MCb LINE L1 -5168 877 8 275 229 8 85 chr2 190814963 190815081 -59872773 + L1ME LINE L1 5617 5725 -396 2123 111 38 24 chr2 190815292 190815663 -59872191 - L1PB4 LINE L1 0 6156 5781 252 214 0 0 chr2 190815666 190815722 -59872132 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 244 192 50 0 chr2 190815770 190815869 -59871985 + (TA)n Simple_repeat Simple_repeat 1 104 0 894 169 12 12 chr2 190815892 190816058 -59871796 - L1PB4 LINE L1 -365 5791 5626 1511 224 3 3 chr2 190816417 190816729 -59871125 - AluJo SINE Alu 0 312 1 756 250 42 0 chr2 190816732 190816900 -59870954 - FAM SINE Alu 0 175 1 22 56 0 0 chr2 190816956 190816992 -59870862 + AT_rich Low_complexity Low_complexity 1 36 0 354 316 41 23 chr2 190819410 190819538 -59868316 - MIR SINE MIR -60 202 72 3352 153 34 14 chr2 190819538 190820128 -59867726 + LTR43 LTR ERV1 1 602 0 354 316 41 23 chr2 190820128 190820164 -59867690 - MIR SINE MIR -190 72 38 8049 146 12 11 chr2 190820421 190820847 -59867007 + Tigger1 DNA MER2_type 1 425 -1993 1830 175 7 0 chr2 190820847 190821156 -59866698 - AluJo SINE Alu -1 311 1 8049 146 12 11 chr2 190821156 190822048 -59865806 + Tigger1 DNA MER2_type 425 1320 -1098 3415 185 36 12 chr2 190822048 190822718 -59865136 + Tigger1 DNA MER2_type 1733 2418 0 193 280 107 13 chr2 190822949 190823024 -59864830 - L3 LINE CR1 -23 1554 1473 402 320 41 17 chr2 190823096 190823268 -59864586 - L3 LINE CR1 -130 1447 1272 25 31 0 0 chr2 190824006 190824038 -59863816 + AT_rich Low_complexity Low_complexity 1 32 0 25 90 0 0 chr2 190824350 190824417 -59863437 + AT_rich Low_complexity Low_complexity 1 67 0 282 336 22 52 chr2 190824801 190824935 -59862919 + MIR SINE MIR 21 150 -112 474 322 26 31 chr2 190824964 190825225 -59862629 - MIR SINE MIR 0 262 3 24 32 0 0 chr2 190825751 190825782 -59862072 + AT_rich Low_complexity Low_complexity 1 31 0 180 111 0 0 chr2 190827347 190827374 -59860480 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 623 299 5 0 chr2 190827477 190827661 -59860193 + MER5A DNA MER1_type 1 185 -4 21 36 0 0 chr2 190827796 190827824 -59860030 + AT_rich Low_complexity Low_complexity 1 28 0 4188 190 14 11 chr2 190828150 190829028 -59858826 - L1M LINE L1 -743 5403 4539 1039 160 6 0 chr2 190829013 190829188 -59858666 - L1 LINE L1 -1876 4270 4095 * 2564 144 24 19 chr2 190829191 190829613 -59858241 - MSTC LTR MaLR -4 424 1 3806 259 118 14 chr2 190829620 190830940 -59856914 - MSTC-int LTR MaLR -7 1644 187 1625 209 20 11 chr2 190830952 190831306 -59856548 - MER4D LTR ERV1 0 903 547 355 184 17 35 chr2 190831303 190831421 -59856433 - MER4D LTR ERV1 -588 284 62 * 1369 161 55 18 chr2 190831415 190831688 -59856166 - MER49 LTR ERV1 -640 283 1 520 180 221 0 chr2 190831692 190831814 -59856040 - MSTC-int LTR MaLR -1555 180 32 1690 223 112 41 chr2 190831855 190832339 -59855515 - MER101B LTR ERV1 -52 518 1 2160 173 58 0 chr2 190832386 190832779 -59855075 - MSTC LTR MaLR -12 416 1 532 193 9 0 chr2 190832780 190832894 -59854960 - L1 LINE L1 -2051 4095 3981 * 1385 204 27 12 chr2 190832883 190833211 -59854643 - L1 LINE L1 -3085 3061 2729 3908 169 31 28 chr2 190833221 190834046 -59853808 + L1MA6 LINE L1 5468 6295 -5 413 235 52 25 chr2 190835288 190835431 -59852423 - MER34 LTR ERV1 -4 538 423 997 187 35 0 chr2 190835705 190835908 -59851946 - L1MA4 LINE L1 -9 6291 6082 388 176 10 98 chr2 190835960 190836062 -59851792 - MER34 LTR ERV1 -435 107 6 35 0 0 0 chr2 190838090 190838125 -59849729 + AT_rich Low_complexity Low_complexity 1 35 0 697 291 70 4 chr2 190838177 190838418 -59849436 - LTR16C LTR ERVL 0 491 235 830 223 30 95 chr2 190838537 190838873 -59848981 + MLT2C1 LTR ERVL 13 326 -71 201 229 0 0 chr2 190838886 190838921 -59848933 + (CA)n Simple_repeat Simple_repeat 2 36 0 290 220 0 0 chr2 190838960 190839010 -59848844 - LTR16C LTR ERVL -392 99 50 338 321 99 36 chr2 190839496 190839748 -59848106 - HERV16 LTR ERVL -4336 660 393 389 366 78 1 chr2 190840086 190840446 -59847408 - LTR16C LTR ERVL 0 491 68 261 322 13 46 chr2 190842506 190842658 -59845196 - LTR16A LTR ERVL -302 148 2 13264 26 2 0 chr2 190842776 190844475 -59843379 - L1P2 LINE L1 -631 5524 3823 6439 32 1 1 chr2 190844474 190845729 -59842125 + L1PA3 LINE L1 4622 5876 -279 * 527 194 5 151 chr2 190845883 190845983 -59841871 - L1MEc LINE L1 -6193 203 147 499 211 7 99 chr2 190845983 190846125 -59841729 - FLAM_A SINE Alu -4 129 1 527 194 5 151 chr2 190846125 190846230 -59841624 - L1MEc LINE L1 -6249 147 28 186 71 0 0 chr2 190846798 190846826 -59841028 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 7721 16 3 0 chr2 190846834 190848423 -59839431 - L1HS LINE L1 -2 6153 4561 24 32 0 0 chr2 190850025 190850056 -59837798 + AT_rich Low_complexity Low_complexity 1 31 0 1746 161 24 0 chr2 190850271 190850569 -59837285 - AluSx SINE Alu -1 311 7 24 0 0 0 chr2 190850600 190850624 -59837230 + AT_rich Low_complexity Low_complexity 1 24 0 243 132 0 0 chr2 190850698 190850736 -59837118 + HY5 scRNA scRNA 1 38 -46 289 200 38 12 chr2 190851581 190851661 -59836193 + (TAGA)n Simple_repeat Simple_repeat 3 84 0 282 362 164 26 chr2 190852273 190852881 -59834973 - L2 LINE L2 -424 2890 2199 22 35 0 0 chr2 190854270 190854299 -59833555 + AT_rich Low_complexity Low_complexity 1 29 0 2094 105 3 0 chr2 190854666 190854952 -59832902 + AluSx SINE Alu 21 307 -5 231 140 0 20 chr2 190856409 190856459 -59831395 + (CTG)n Simple_repeat Simple_repeat 3 51 0 21 36 0 0 chr2 190859556 190859584 -59828270 + AT_rich Low_complexity Low_complexity 1 28 0 971 57 0 0 chr2 190861338 190861460 -59826394 + L1PA3 LINE L1 6031 6152 -3 255 274 0 0 chr2 190861638 190861689 -59826165 - MER81 DNA DNA -44 70 20 5442 63 6 149 chr2 190861965 190862929 -59824925 + LTR12 LTR ERV1 1 826 0 28 0 0 0 chr2 190863104 190863132 -59824722 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr2 190863135 190863155 -59824699 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 21 57 0 0 chr2 190864721 190864756 -59823098 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 190864972 190865001 -59822853 + AT_rich Low_complexity Low_complexity 1 29 0 24 100 0 0 chr2 190865247 190865327 -59822527 + AT_rich Low_complexity Low_complexity 1 80 0 2807 153 63 5 chr2 190865465 190866037 -59821817 - MER39B LTR ERV1 -5 648 1 458 193 7 73 chr2 190867956 190868106 -59819748 + L1MA6 LINE L1 5245 5384 -762 505 147 0 20 chr2 190868119 190868221 -59819633 + (TATATG)n Simple_repeat Simple_repeat 3 102 0 3011 158 41 5 chr2 190868228 190868785 -59819069 + L1MA6 LINE L1 5373 5949 -351 840 21 0 0 chr2 190868794 190868891 -59818963 - L1PA3 LINE L1 -3 6152 6056 1738 191 6 0 chr2 190868891 190869236 -59818618 + L1MA6 LINE L1 5938 6285 -15 23 68 0 0 chr2 190869236 190869280 -59818574 + AT_rich Low_complexity Low_complexity 1 44 0 451 287 21 37 chr2 190869834 190870022 -59817832 - LTR41 LTR ERVL -586 187 3 2853 258 63 43 chr2 190870444 190870746 -59817108 + L1MCb LINE L1 5 299 -6034 1668 142 62 59 chr2 190870746 190870945 -59816909 - THE1C LTR MaLR 0 375 173 2229 125 0 0 chr2 190870945 190871248 -59816606 - AluSx SINE Alu -9 303 1 1668 142 62 59 chr2 190871248 190871422 -59816432 - THE1C LTR MaLR -202 173 1 2853 258 63 43 chr2 190871422 190872559 -59815295 + L1MCb LINE L1 299 1482 -4851 1114 243 65 6 chr2 190872651 190872989 -59814865 + L1M4 LINE L1 4022 4379 -1767 1105 199 5 5 chr2 190872994 190873195 -59814659 - MLT1B LTR MaLR 0 390 190 680 213 0 15 chr2 190873241 190873377 -59814477 - AluJb SINE Alu -178 134 1 442 245 26 15 chr2 190873380 190873535 -59814319 - MLT1B LTR MaLR -216 158 1 1729 242 47 16 chr2 190873537 190874086 -59813768 + L1M4 LINE L1 4382 4947 -1199 2191 171 28 61 chr2 190874105 190874649 -59813205 - L1MC2 LINE L1 -45 6299 5774 267 286 29 0 chr2 190874679 190874749 -59813105 + MIR SINE MIR 72 143 -119 37 81 0 0 chr2 190874750 190874836 -59813018 + AT_rich Low_complexity Low_complexity 1 86 0 23 54 0 0 chr2 190875827 190875864 -59811990 + AT_rich Low_complexity Low_complexity 1 37 0 2496 167 14 0 chr2 190875866 190876285 -59811569 - L1PA16 LINE L1 -9 6157 5733 3900 221 29 4 chr2 190876285 190876817 -59811037 - L1 LINE L1 -1207 4939 4374 363 23 0 0 chr2 190876817 190876861 -59810993 + (TG)n Simple_repeat Simple_repeat 2 45 0 3900 221 29 4 chr2 190876861 190877233 -59810621 - L1 LINE L1 -1772 4374 4013 24 0 0 0 chr2 190877271 190877295 -59810559 + AT_rich Low_complexity Low_complexity 1 24 0 279 219 37 12 chr2 190878203 190878285 -59809569 - LTR40b LTR ERVL -12 450 367 662 310 35 45 chr2 190878554 190878844 -59809010 - LTR40b LTR ERVL -175 287 1 425 264 39 45 chr2 190879315 190879493 -59808361 + LTR16A1 LTR ERVL 281 457 0 492 240 144 34 chr2 190879530 190879685 -59808169 - MIR SINE MIR -14 248 63 1697 180 24 30 chr2 190879685 190880057 -59807797 - MLT1A2 LTR MaLR 0 374 5 492 240 144 34 chr2 190880057 190880109 -59807745 - MIR SINE MIR -199 63 18 27 0 0 0 chr2 190880798 190880825 -59807029 + AT_rich Low_complexity Low_complexity 1 27 0 21 37 0 56 chr2 190880987 190881041 -59806813 + AT_rich Low_complexity Low_complexity 1 51 0 504 351 113 22 chr2 190881749 190882210 -59805644 + L2 LINE L2 1747 2249 -1065 603 175 18 0 chr2 190883078 190883192 -59804662 - L1MD1 LINE L1 -13 6229 6114 22 35 0 0 chr2 190883702 190883731 -59804123 + AT_rich Low_complexity Low_complexity 1 29 0 338 239 94 17 chr2 190883754 190883871 -59803983 + L2 LINE L2 3169 3294 -19 10572 27 0 0 chr2 190884606 190885883 -59801971 - L1P LINE L1 -2938 3208 1932 6816 20 0 0 chr2 190885882 190886677 -59801177 + L1P LINE L1 3737 4531 -1615 * 315 49 0 0 chr2 190887748 190887789 -59800065 + (TG)n Simple_repeat Simple_repeat 2 42 0 414 62 62 0 chr2 190887789 190887853 -59800001 - MER41B LTR ERV1 -88 547 480 2551 116 0 0 chr2 190888293 190888646 -59799208 + THE1B LTR MaLR 1 353 -11 6713 128 42 44 chr2 190888653 190889805 -59798049 + THE1B-int LTR MaLR 1 1149 -431 1791 108 16 0 chr2 190889806 190890055 -59797799 + THE1B LTR MaLR 111 363 -1 186 241 86 17 chr2 190890769 190890827 -59797027 - L2 LINE L2 -4 3309 3248 22 35 0 0 chr2 190890827 190890856 -59796998 + AT_rich Low_complexity Low_complexity 1 29 0 186 103 0 0 chr2 190891403 190891432 -59796422 + (CA)n Simple_repeat Simple_repeat 2 30 0 18930 204 35 23 chr2 190891795 190896882 -59790972 + L1MA3 LINE L1 17 5237 -2487 240 35 0 0 chr2 190896882 190896911 -59790943 + (CA)n Simple_repeat Simple_repeat 2 30 0 18930 204 35 23 chr2 190896911 190899430 -59788424 + L1MA3 LINE L1 5237 7724 0 294 274 0 0 chr2 190899776 190899838 -59788016 + MER7A DNA MER2_type 2 63 -285 * 345 135 0 0 chr2 190899837 190899889 -59787965 + AluSq/x SINE Alu 84 135 -167 1080 261 144 47 chr2 190899912 190900435 -59787419 - MLT1E LTR MaLR 0 624 1 266 297 40 20 chr2 190900435 190900536 -59787318 - L2 LINE L2 -264 3049 2947 5020 193 52 13 chr2 190900683 190900779 -59787075 + ERVL-D LTR ERVL 3652 3743 -2021 1947 159 3 0 chr2 190900779 190901087 -59786767 - AluSx SINE Alu -3 309 1 5020 193 52 13 chr2 190901087 190901964 -59785890 + ERVL-D LTR ERVL 3743 4663 -1101 423 298 26 40 chr2 190902080 190902308 -59785546 - L1ME LINE L1 -329 5792 5568 4132 175 22 25 chr2 190902323 190903096 -59784758 + ERVL-D LTR ERVL 4649 5419 -345 285 29 0 0 chr2 190903097 190903131 -59784723 + (TG)n Simple_repeat Simple_repeat 1 34 0 1466 143 59 35 chr2 190903140 190903427 -59784427 - MER44D DNA MER2_type -11 598 35 1513 174 37 22 chr2 190903439 190903761 -59784093 + ERVL-D LTR ERVL 5431 5757 -7 1176 133 11 0 chr2 190903761 190903941 -59783913 + MLT2D LTR ERVL 1 182 -232 2115 117 0 3 chr2 190904023 190904353 -59783501 - AluSc SINE Alu 0 309 1 194 300 246 0 chr2 190904420 190904530 -59783324 + MIR3 SINE MIR 72 208 0 22 0 0 0 chr2 190905485 190905507 -59782347 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 190905841 190905878 -59781976 + AT_rich Low_complexity Low_complexity 1 37 0 230 179 0 0 chr2 190907095 190907134 -59780720 - L1ME LINE L1 -2406 5402 5364 378 292 68 35 chr2 190907137 190907350 -59780504 + L1M3c LINE L1 11 497 -6078 1070 218 40 18 chr2 190907355 190907630 -59780224 + L1ME3 LINE L1 1591 1871 -4513 1906 216 71 11 chr2 190907778 190908917 -59778937 + L1ME3 LINE L1 5175 6401 -9 186 167 0 0 chr2 190909053 190909089 -59778765 + GA-rich Low_complexity Low_complexity 1 36 0 5176 191 26 6 chr2 190909130 190910933 -59776921 + L1PA16 LINE L1 4326 6165 -1 21 0 0 0 chr2 190911603 190911624 -59776230 + AT_rich Low_complexity Low_complexity 1 21 0 1697 197 65 78 chr2 190912360 190912872 -59774982 + MLT1D LTR MaLR 1 505 0 1870 237 62 49 chr2 190913670 190914286 -59773568 - MLT1E3 LTR MaLR 0 624 1 1644 196 0 6 chr2 190914323 190914634 -59773220 + AluJb SINE Alu 3 311 -1 265 255 170 11 chr2 190915325 190915513 -59772341 + HAL1 LINE L1 1446 1663 -844 201 39 0 0 chr2 190915807 190915833 -59772021 + (CA)n Simple_repeat Simple_repeat 2 27 0 31 26 0 0 chr2 190916622 190916660 -59771194 + AT_rich Low_complexity Low_complexity 1 38 0 1217 217 33 12 chr2 190916689 190917021 -59770833 - L1 LINE L1 -1638 4508 4170 673 204 49 12 chr2 190917061 190917223 -59770631 + L1MA10 LINE L1 6166 6333 -1 199 296 19 0 chr2 190917261 190917315 -59770539 + L2 LINE L2 3202 3256 -16 1969 146 61 3 chr2 190917331 190917660 -59770194 - MER7A DNA MER2_type 0 346 1 22 35 0 0 chr2 190919074 190919103 -59768751 + AT_rich Low_complexity Low_complexity 1 29 0 691 327 129 21 chr2 190919322 190919710 -59768144 + LTR16B LTR ERVL 3 432 -32 393 252 29 92 chr2 190920133 190920339 -59767515 + LTR16B LTR ERVL 272 464 0 23 54 0 0 chr2 190920860 190920897 -59766957 + AT_rich Low_complexity Low_complexity 1 37 0 23 54 0 0 chr2 190920969 190921006 -59766848 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr2 190921186 190921210 -59766644 + AT_rich Low_complexity Low_complexity 1 24 0 260 154 0 0 chr2 190922846 190922898 -59764956 + L1MC3 LINE L1 5255 5306 -2479 1839 237 79 57 chr2 190922899 190923812 -59764042 + L1MC3 LINE L1 6653 7639 -356 508 317 128 14 chr2 190923863 190924286 -59763568 + L1M4 LINE L1 3768 4238 -1908 222 116 0 0 chr2 190925683 190925726 -59762128 + (CA)n Simple_repeat Simple_repeat 1 43 0 1730 91 8 30 chr2 190925970 190926235 -59761619 + AluY SINE Alu 42 300 -11 25 51 0 0 chr2 190926288 190926327 -59761527 + AT_rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr2 190926470 190926499 -59761355 + AT_rich Low_complexity Low_complexity 1 29 0 23 92 0 0 chr2 190927765 190927830 -59760024 + AT_rich Low_complexity Low_complexity 1 65 0 2055 113 17 0 chr2 190928139 190928441 -59759413 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr2 190929061 190929082 -59758772 + AT_rich Low_complexity Low_complexity 1 21 0 214 155 78 29 chr2 190929986 190930089 -59757765 + (TA)n Simple_repeat Simple_repeat 1 108 0 26 50 0 0 chr2 190930104 190930144 -59757710 + AT_rich Low_complexity Low_complexity 1 40 0 322 61 0 41 chr2 190931370 190931419 -59756435 - L1PA7 LINE L1 -8 6146 6100 24 53 0 0 chr2 190931473 190931511 -59756343 + AT_rich Low_complexity Low_complexity 1 38 0 5063 146 7 11 chr2 190932790 190933081 -59754773 - L1PA15 LINE L1 -13 6855 6564 2609 102 3 0 chr2 190933081 190933435 -59754419 + THE1A LTR MaLR 1 355 0 10859 113 7 1 chr2 190933435 190935005 -59752849 + THE1A-int LTR MaLR 1 1580 0 2321 125 8 3 chr2 190935005 190935358 -59752496 + THE1A LTR MaLR 1 355 0 5063 146 7 11 chr2 190935358 190936254 -59751600 - L1PA15 LINE L1 -301 6567 5665 10109 213 22 33 chr2 190936259 190939981 -59747873 - L1PA15 LINE L1 -1299 5550 1867 954 203 88 35 chr2 190939993 190940298 -59747556 + MSTD LTR MaLR 43 394 -2 243 316 226 0 chr2 190943172 190943305 -59744549 + MER5B DNA MER1_type 7 169 -9 22 0 0 0 chr2 190943840 190943862 -59743992 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 190945135 190945156 -59742698 + AT_rich Low_complexity Low_complexity 1 21 0 2297 179 24 0 chr2 190945286 190945704 -59742150 - MSTB1 LTR MaLR -1 431 4 434 358 42 40 chr2 190947138 190947414 -59740440 - L1M4 LINE L1 -748 5398 5124 189 0 0 0 chr2 190947414 190947435 -59740419 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1606 185 0 0 chr2 190947435 190947700 -59740154 - AluJb SINE Alu -33 279 15 434 358 42 40 chr2 190947700 190947947 -59739907 - L1M4 LINE L1 -1021 5125 4873 323 269 105 47 chr2 190947994 190948251 -59739603 - L1M4 LINE L1 -1325 4821 4550 183 42 0 0 chr2 190949480 190949504 -59738350 + (T)n Simple_repeat Simple_repeat 1 24 0 249 340 72 0 chr2 190950769 190950866 -59736988 - L2 LINE L2 0 3272 3169 1247 158 17 42 chr2 190951721 190951961 -59735893 - MER46A DNA MER2_type -2 234 1 36 94 0 0 chr2 190953984 190954090 -59733764 + AT_rich Low_complexity Low_complexity 1 106 0 23 0 0 0 chr2 190954218 190954241 -59733613 + AT_rich Low_complexity Low_complexity 1 23 0 644 158 16 24 chr2 190955401 190955528 -59732326 + MSTB1 LTR MaLR 189 314 -118 2158 122 3 0 chr2 190955739 190956043 -59731811 + AluSx SINE Alu 1 305 -7 2497 166 14 9 chr2 190956455 190956882 -59730972 + MSTB1 LTR MaLR 4 432 0 409 309 166 0 chr2 190957544 190957725 -59730129 - MIR SINE MIR -21 241 31 633 239 55 103 chr2 190957740 190958234 -59729620 - L1MC5 LINE L1 -50 7911 7442 385 297 10 10 chr2 190959288 190959389 -59728465 + L2 LINE L2 3195 3295 -18 4685 248 96 45 chr2 190959457 190962400 -59725454 + L1M3e LINE L1 5 2929 -4177 2169 121 0 0 chr2 190962400 190962698 -59725156 - AluSx SINE Alu -14 298 1 4685 248 96 45 chr2 190962698 190963972 -59723882 + L1M3e LINE L1 2929 4136 -2970 228 121 0 0 chr2 190963973 190964006 -59723848 + L1M3e LINE L1 4370 4402 -2704 6800 173 18 13 chr2 190964010 190965282 -59722572 - Tigger4(Zombi) DNA MER2_type -2 2729 1452 246 174 0 0 chr2 190965282 190965328 -59722526 + (TG)n Simple_repeat Simple_repeat 2 47 0 8059 170 30 13 chr2 190965350 190966786 -59721068 - Tigger4(Zombi) DNA MER2_type -1271 1460 1 3830 169 49 45 chr2 190966787 190967637 -59720217 + L1M3e LINE L1 4404 5257 -1849 204 200 0 0 chr2 190969118 190969163 -59718691 + (TATATG)n Simple_repeat Simple_repeat 1 45 0 206 264 19 0 chr2 190969418 190969471 -59718383 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 1909 151 20 0 chr2 190969498 190969668 -59718186 - AluSg SINE Alu -6 304 124 189 0 0 0 chr2 190969668 190969689 -59718165 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1909 151 20 0 chr2 190969689 190969816 -59718038 - AluSg SINE Alu -186 124 1 27 81 0 0 chr2 190970103 190970165 -59717689 + AT_rich Low_complexity Low_complexity 1 62 0 314 90 39 13 chr2 190971049 190971127 -59716727 + (TA)n Simple_repeat Simple_repeat 1 80 0 850 274 55 15 chr2 190971128 190971456 -59716398 - L1ME2 LINE L1 -75 6089 5749 5282 179 48 13 chr2 190971657 190972832 -59715022 + L1MC1 LINE L1 5122 6332 -1 9223 255 26 37 chr2 190972861 190973453 -59714401 + L1PA16 LINE L1 1812 2409 -3747 2275 71 0 0 chr2 190973453 190973765 -59714089 + AluY SINE Alu 1 312 0 9223 255 26 37 chr2 190973765 190977193 -59710661 + L1PA16 LINE L1 2409 5783 -373 757 282 23 0 chr2 190977194 190977453 -59710401 + L1PA16 LINE L1 5888 6152 -14 355 218 99 14 chr2 190977450 190977592 -59710262 + L1MC3 LINE L1 7620 7773 -12 * 366 277 25 19 chr2 190978607 190978766 -59709088 + (TATATG)n Simple_repeat Simple_repeat 2 161 0 25 31 0 0 chr2 190979118 190979150 -59708704 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr2 190980938 190980967 -59706887 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr2 190981260 190981284 -59706570 + (A)n Simple_repeat Simple_repeat 1 24 0 40 37 0 0 chr2 190981291 190981345 -59706509 + AT_rich Low_complexity Low_complexity 1 54 0 225 0 0 0 chr2 190982150 190982175 -59705679 + (A)n Simple_repeat Simple_repeat 1 25 0 32 57 0 0 chr2 190982182 190982235 -59705619 + AT_rich Low_complexity Low_complexity 1 53 0 2556 110 0 131 chr2 190982561 190983072 -59704782 - MLT2A1 LTR ERVL 0 444 1 2046 170 24 5 chr2 190983108 190983491 -59704363 + MLT1B LTR MaLR 1 390 0 180 377 14 14 chr2 190984455 190984524 -59703330 - MIR3 SINE MIR -129 79 11 216 0 0 0 chr2 190985044 190985068 -59702786 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1749 216 32 68 chr2 190985396 190985900 -59701954 - MLT1D LTR MaLR 0 505 20 31 68 0 0 chr2 190986286 190986345 -59701509 + AT_rich Low_complexity Low_complexity 1 59 0 225 356 0 0 chr2 190986516 190986606 -59701248 + L2 LINE L2 3183 3272 0 237 279 38 13 chr2 190986997 190987076 -59700778 + L2 LINE L2 3233 3313 0 831 276 103 27 chr2 190987575 190988194 -59699660 + L1MCa LINE L1 1422 2274 -4333 1395 259 96 47 chr2 190988202 190989010 -59698844 + L1MCa LINE L1 3051 3922 -2504 1467 180 0 71 chr2 190989010 190989321 -59698533 + AluJb SINE Alu 9 297 -15 1395 259 96 47 chr2 190989321 190989543 -59698311 + L1MCa LINE L1 3922 4132 -2294 8037 184 57 16 chr2 190989562 190990791 -59697063 + L1PBa LINE L1 6 1184 -5678 432 0 0 0 chr2 190990791 190990839 -59697015 + (CA)n Simple_repeat Simple_repeat 1 48 0 8037 184 57 16 chr2 190990839 190992906 -59694948 + L1PBa LINE L1 1184 4644 -2218 4533 230 4 4 chr2 190992914 190993994 -59693860 - L1 LINE L1 -2647 4215 3136 1092 161 22 0 chr2 190993999 190994260 -59693594 - L1PBa LINE L1 -3819 3043 2778 5932 109 2 5 chr2 190994313 190995271 -59692583 + L1PB1 LINE L1 5193 6149 -2 3371 128 6 2 chr2 190995272 190995794 -59692060 + L1PA16 LINE L1 5353 5876 -290 274 268 52 26 chr2 190995913 190996066 -59691788 - LTR37B LTR ERV1 -202 266 110 292 338 68 20 chr2 190996539 190996687 -59691167 + L2 LINE L2 3159 3313 0 21 36 0 0 chr2 190998865 190998893 -59688961 + AT_rich Low_complexity Low_complexity 1 28 0 2193 104 9 0 chr2 190998893 190999219 -59688635 - L1PB1 LINE L1 -2 6149 5821 228 268 0 0 chr2 190999618 190999674 -59688180 + (TA)n Simple_repeat Simple_repeat 2 57 0 280 222 22 33 chr2 190999677 190999767 -59688087 - L1MC4 LINE L1 -1340 6702 6614 203 61 30 0 chr2 190999767 190999800 -59688054 + (TG)n Simple_repeat Simple_repeat 2 35 0 2534 211 56 48 chr2 190999809 191000490 -59687364 + L1MB8 LINE L1 5405 6090 -88 710 265 87 110 chr2 191000642 191001088 -59686766 + MLT1E LTR MaLR 8 443 -150 894 103 0 29 chr2 191001089 191001225 -59686629 - FLAM_C SINE Alu -1 142 11 663 258 11 37 chr2 191001231 191001421 -59686433 + MLT1E LTR MaLR 407 591 -2 753 284 78 66 chr2 191001425 191001928 -59685926 - L1ME3A LINE L1 -157 6013 5505 25 31 0 0 chr2 191004154 191004186 -59683668 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 191004242 191004263 -59683591 + AT_rich Low_complexity Low_complexity 1 21 0 1273 199 25 108 chr2 191005061 191005458 -59682396 + MLT1A1 LTR MaLR 2 365 0 22567 177 18 13 chr2 191005920 191011295 -59676559 - L1PA11 LINE L1 -5 6169 770 22 56 0 0 chr2 191012948 191012984 -59674870 + AT_rich Low_complexity Low_complexity 1 36 0 230 381 9 0 chr2 191014031 191014136 -59673718 - MIR3 SINE MIR -53 155 50 214 357 12 12 chr2 191014354 191014438 -59673416 - L2 LINE L2 -5 3267 3184 216 0 0 0 chr2 191014438 191014462 -59673392 + (A)n Simple_repeat Simple_repeat 1 24 0 778 256 0 0 chr2 191017336 191017500 -59670354 - FAM SINE Alu -11 164 1 2502 64 0 0 chr2 191018277 191018588 -59669266 + AluY SINE Alu 1 311 0 605 266 51 42 chr2 191018797 191019011 -59668843 - MER58A DNA MER1_type 0 224 9 180 231 0 0 chr2 191019282 191019334 -59668520 + (TA)n Simple_repeat Simple_repeat 1 52 0 38 22 0 0 chr2 191019780 191019825 -59668029 + AT_rich Low_complexity Low_complexity 1 45 0 26 64 0 0 chr2 191020227 191020274 -59667580 + AT_rich Low_complexity Low_complexity 1 47 0 26 30 0 0 chr2 191020449 191020482 -59667372 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr2 191021056 191021085 -59666769 + AT_rich Low_complexity Low_complexity 1 29 0 678 245 19 0 chr2 191023994 191024153 -59663701 + MER5A DNA MER1_type 6 167 -22 501 285 159 0 chr2 191024493 191024644 -59663210 - MER5A DNA MER1_type -6 183 9 425 285 71 80 chr2 191024721 191024903 -59662951 + MLT1D LTR MaLR 3 182 -323 2096 92 0 11 chr2 191024903 191025184 -59662670 + AluSg SINE Alu 1 278 -32 425 285 71 80 chr2 191025184 191025352 -59662502 + MLT1D LTR MaLR 182 350 -155 651 295 61 47 chr2 191025580 191025943 -59661911 - L2 LINE L2 -82 3231 2864 395 374 74 4 chr2 191025977 191026207 -59661647 - MIR SINE MIR -2 260 15 2660 280 74 15 chr2 191026328 191027339 -59660515 + L1MCb LINE L1 4 1074 -4971 300 255 180 25 chr2 191027452 191027613 -59660241 - MIR SINE MIR -49 213 28 1170 174 35 139 chr2 191029106 191029423 -59658431 + AluJo SINE Alu 1 284 -18 321 47 0 0 chr2 191029425 191029468 -59658386 + (CA)n Simple_repeat Simple_repeat 2 44 0 345 253 13 0 chr2 191030850 191030929 -59656925 + MER5A DNA MER1_type 30 109 -80 324 351 3 32 chr2 191032269 191032501 -59655353 - L1M4 LINE L1 -468 5710 5482 619 251 19 28 chr2 191032682 191032893 -59654961 + MER3 DNA MER1_type 1 209 0 1929 267 83 35 chr2 191033002 191033122 -59654732 - L1MC4 LINE L1 -564 7478 7365 572 129 0 0 chr2 191033122 191033207 -59654647 + L1PA7 LINE L1 6056 6140 -14 1929 267 83 35 chr2 191033207 191033993 -59653861 - L1MC4 LINE L1 -677 7365 6529 230 278 0 0 chr2 191034318 191034372 -59653482 - L2 LINE L2 -15 3257 3204 2784 166 8 6 chr2 191034444 191034921 -59652933 - MER66A LTR ERV1 0 478 1 533 301 124 0 chr2 191035328 191035514 -59652340 + MIR SINE MIR 51 259 -3 22 0 0 0 chr2 191035876 191035898 -59651956 + AT_rich Low_complexity Low_complexity 1 22 0 246 222 25 12 chr2 191035943 191036024 -59651830 + (TA)n Simple_repeat Simple_repeat 2 83 0 438 394 36 48 chr2 191036188 191036607 -59651247 + L2 LINE L2 2828 3241 -31 546 281 118 32 chr2 191037582 191037803 -59650051 + MIR SINE MIR 23 262 0 23 33 0 0 chr2 191038588 191038618 -59649236 + AT_rich Low_complexity Low_complexity 1 30 0 1938 130 21 3 chr2 191039340 191039625 -59648229 + AluSx SINE Alu 8 297 -15 23 33 0 0 chr2 191040923 191040953 -59646901 + AT_rich Low_complexity Low_complexity 1 30 0 268 306 68 15 chr2 191041067 191041203 -59646651 + MIR SINE MIR 3 154 -62 21 0 0 0 chr2 191041739 191041760 -59646094 + AT_rich Low_complexity Low_complexity 1 21 0 402 325 46 26 chr2 191042266 191042460 -59645394 + LTR16C LTR ERVL 3 200 -291 2231 99 0 35 chr2 191042488 191042801 -59645053 - AluSx SINE Alu -10 302 1 2901 220 182 19 chr2 191042971 191044253 -59643601 - L1MCa LINE L1 -3866 2698 1208 382 240 91 16 chr2 191044378 191044499 -59643355 - L1MCa LINE L1 -5541 1023 894 1175 293 24 68 chr2 191044647 191045281 -59642573 - L1MCa LINE L1 -5439 606 1 252 242 86 102 chr2 191045298 191045426 -59642428 + LTR16C LTR ERVL 354 479 -12 25 31 0 0 chr2 191045644 191045676 -59642178 + AT_rich Low_complexity Low_complexity 1 32 0 2640 241 74 12 chr2 191046767 191047488 -59640366 - MER21B LTR ERV1 -71 860 1 383 387 76 20 chr2 191047696 191048007 -59639847 - L2 LINE L2 -276 3037 2714 385 377 56 30 chr2 191048090 191048395 -59639459 - LTR16C LTR ERVL -23 468 156 412 182 23 0 chr2 191048511 191048599 -59639255 + L1MA3 LINE L1 4864 4953 -1193 * 5148 158 32 6 chr2 191048589 191049511 -59638343 + L1MA3 LINE L1 5329 6268 -37 23 0 0 0 chr2 191049511 191049534 -59638320 + AT_rich Low_complexity Low_complexity 1 23 0 208 154 0 26 chr2 191049751 191049790 -59638064 + CT-rich Low_complexity Low_complexity 3 40 0 22 0 0 0 chr2 191049947 191049969 -59637885 + AT_rich Low_complexity Low_complexity 1 22 0 5562 155 17 12 chr2 191050228 191051286 -59636568 - L1MA8 LINE L1 -1 6290 5225 591 198 85 19 chr2 191051286 191051396 -59636458 - MER44D DNA MER2_type -1882 605 504 360 43 0 0 chr2 191051396 191051442 -59636412 + (TC)n Simple_repeat Simple_repeat 1 46 0 591 198 85 19 chr2 191051442 191051541 -59636313 - MER44D DNA MER2_type -1983 504 1 1763 212 14 30 chr2 191051543 191051982 -59635872 - L1MA8 LINE L1 -923 5223 4792 329 227 27 0 chr2 191052136 191052211 -59635643 + MER2 DNA MER2_type 269 345 0 2159 176 26 0 chr2 191052638 191053053 -59634801 - L1MB2 LINE L1 -9 6162 5737 1477 229 48 21 chr2 191053053 191053428 -59634426 - MLT1B LTR MaLR 0 390 6 511 182 10 25 chr2 191053433 191053631 -59634223 - L1MB2 LINE L1 -430 5741 5577 23 54 0 0 chr2 191053999 191054036 -59633818 + AT_rich Low_complexity Low_complexity 1 37 0 1669 205 87 43 chr2 191054476 191054945 -59632909 - LTR2B LTR ERV1 0 490 1 23 68 0 0 chr2 191055262 191055306 -59632548 + AT_rich Low_complexity Low_complexity 1 44 0 2446 76 3 0 chr2 191056309 191056613 -59631241 + AluY SINE Alu 7 311 0 190 326 58 12 chr2 191056689 191056775 -59631079 - L2 LINE L2 -1413 1901 1812 921 214 25 10 chr2 191056905 191057106 -59630748 - MLT1B LTR MaLR -186 204 1 23 0 0 0 chr2 191057635 191057658 -59630196 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 191057749 191057770 -59630084 + AT_rich Low_complexity Low_complexity 1 21 0 421 300 0 0 chr2 191057909 191058009 -59629845 + L2 LINE L2 3214 3313 0 231 36 0 0 chr2 191058023 191058051 -59629803 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 199 315 27 14 chr2 191058588 191058661 -59629193 + L2 LINE L2 3222 3295 -18 1270 92 5 11 chr2 191060026 191060211 -59627643 + LTR7 LTR ERV1 1 184 -266 2280 65 49 8 chr2 191060232 191060612 -59627242 - LTR7 LTR ERV1 -7 443 1 24 0 0 0 chr2 191060727 191060751 -59627103 + AT_rich Low_complexity Low_complexity 1 24 0 643 220 138 0 chr2 191060751 191060969 -59626885 - L1MD3 LINE L1 -18 7977 7730 269 186 68 37 chr2 191061090 191061251 -59626603 + (CATATA)n Simple_repeat Simple_repeat 1 166 0 552 317 95 23 chr2 191061666 191061887 -59625967 + MIR SINE MIR 5 241 -21 238 273 0 45 chr2 191063462 191063550 -59624304 + (CATATA)n Simple_repeat Simple_repeat 6 89 0 662 192 0 8 chr2 191063866 191063986 -59623868 + FLAM_C SINE Alu 5 123 -10 962 208 143 19 chr2 191065161 191065426 -59622428 + MSTA LTR MaLR 3 300 -128 466 146 58 19 chr2 191066273 191066376 -59621478 - MER53 DNA DNA -82 107 1 1074 200 41 94 chr2 191067245 191067601 -59620253 - L1M2 LINE L1 -746 5400 5198 2027 200 27 5 chr2 191067613 191068062 -59619792 - L1PB4 LINE L1 -3 6153 5695 1121 151 23 10 chr2 191068162 191068528 -59619326 - L1PB4 LINE L1 -702 5454 5082 1214 250 30 0 chr2 191068546 191068850 -59619004 - L1M2 LINE L1 -962 5184 4872 3172 199 25 29 chr2 191068857 191069610 -59618244 + L1MA10 LINE L1 5584 6333 -1 4841 196 44 2 chr2 191070499 191072353 -59615501 + L1PA16 LINE L1 4124 6061 -105 359 127 0 28 chr2 191072354 191072425 -59615429 + L1PA16 LINE L1 6098 6166 0 204 40 0 0 chr2 191072758 191072783 -59615071 + (T)n Simple_repeat Simple_repeat 1 25 0 320 208 0 0 chr2 191072783 191072855 -59614999 - LTR30 LTR ERV1 -99 623 552 2999 137 6 4 chr2 191073195 191073690 -59614164 + L1MA3 LINE L1 5800 6295 -10 1318 179 58 12 chr2 191073714 191074034 -59613820 + L1MA4 LINE L1 5943 6267 -45 197 383 12 0 chr2 191074250 191074331 -59613523 - L2 LINE L2 0 3313 3232 1894 186 17 6 chr2 191075427 191075788 -59612066 - MLT1A1 LTR MaLR 0 365 1 269 267 25 109 chr2 191075850 191076032 -59611822 - MIR SINE MIR -73 135 14 23 0 0 0 chr2 191076401 191076424 -59611430 + AT_rich Low_complexity Low_complexity 1 23 0 260 313 58 91 chr2 191076763 191077006 -59610848 - L2 LINE L2 -759 2555 2321 185 196 18 0 chr2 191077276 191077332 -59610522 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 25 51 0 0 chr2 191077360 191077399 -59610455 + AT_rich Low_complexity Low_complexity 1 39 0 256 172 0 31 chr2 191078063 191078127 -59609727 + A-rich Low_complexity Low_complexity 1 62 0 1604 277 67 35 chr2 191078452 191079080 -59608774 + MER77 LTR ERV1 44 742 -10 299 283 85 19 chr2 191079148 191079254 -59608600 - MIR SINE MIR -71 191 79 1631 159 11 4 chr2 191080414 191080691 -59607163 + AluSx SINE Alu 1 279 -33 2247 109 0 7 chr2 191081959 191082262 -59605592 - AluSp SINE Alu -10 303 3 25 75 0 0 chr2 191082453 191082506 -59605348 + AT_rich Low_complexity Low_complexity 1 53 0 361 285 48 71 chr2 191082641 191082745 -59605109 + L1M4 LINE L1 3875 3980 -2166 2234 98 0 16 chr2 191082745 191083061 -59604793 + AluY SINE Alu 1 311 0 361 285 48 71 chr2 191083061 191083310 -59604544 + L1M4 LINE L1 3980 4220 -1926 2169 111 55 0 chr2 191083388 191083731 -59604123 - L1PA8A LINE L1 -3 6128 5767 2281 52 3 0 chr2 191084503 191084790 -59603064 - L1PA7 LINE L1 -1 6153 5866 8486 216 26 57 chr2 191084891 191085863 -59601991 + L1MC1 LINE L1 2366 3367 -3246 679 175 97 26 chr2 191085863 191086017 -59601837 + AluJo SINE Alu 122 286 -26 8486 216 26 57 chr2 191086017 191088230 -59599624 + L1MC1 LINE L1 3367 5647 -966 1710 183 0 19 chr2 191088230 191088541 -59599313 + AluJo SINE Alu 1 305 -7 8486 216 26 57 chr2 191088541 191088825 -59599029 + L1MC1 LINE L1 5647 5938 -675 2257 100 0 25 chr2 191088825 191089145 -59598709 - AluSq SINE Alu -1 312 1 8486 216 26 57 chr2 191089145 191089898 -59597956 + L1MC1 LINE L1 5938 6613 0 2437 167 39 10 chr2 191090788 191091274 -59596580 - L1MA8 LINE L1 -6 6285 5786 275 250 179 0 chr2 191092152 191092236 -59595618 + MIR SINE MIR 61 159 -103 24 32 0 0 chr2 191093353 191093384 -59594470 + AT_rich Low_complexity Low_complexity 1 31 0 2919 215 121 25 chr2 191093755 191094596 -59593258 + L1MD2 LINE L1 5426 6347 -12 26 30 0 0 chr2 191094679 191094712 -59593142 + AT_rich Low_complexity Low_complexity 1 33 0 241 258 86 21 chr2 191094877 191094970 -59592884 - MIR SINE MIR -78 184 86 6251 174 29 20 chr2 191097978 191099816 -59588038 - L1MA4A LINE L1 -280 6023 4202 1796 184 73 15 chr2 191099816 191100159 -59587695 + THE1B LTR MaLR 1 363 -1 10954 109 4 16 chr2 191100164 191101759 -59586095 + THE1B-int LTR MaLR 5 1580 0 1960 163 73 14 chr2 191101759 191102103 -59585751 + THE1B LTR MaLR 1 364 0 6251 174 29 20 chr2 191102103 191102247 -59585607 - L1MA4A LINE L1 -2103 4200 4028 1152 109 0 0 chr2 191102247 191102428 -59585426 + L1MA4A LINE L1 6119 6302 -1 210 333 56 0 chr2 191104167 191104257 -59583597 - L2 LINE L2 0 3313 3219 1288 204 3 65 chr2 191104405 191104714 -59583140 + AluJo SINE Alu 1 290 -22 2152 258 52 13 chr2 191106904 191107840 -59580014 + L1MB1 LINE L1 777 1797 -4516 4591 200 30 3 chr2 191107885 191109604 -59578250 + L1MB1 LINE L1 4633 6403 -1 513 263 55 93 chr2 191109673 191109963 -59577891 + L1MA10 LINE L1 5885 6322 -4 43 71 0 0 chr2 191110228 191110313 -59577541 + AT_rich Low_complexity Low_complexity 1 85 0 289 336 62 24 chr2 191110404 191110615 -59577239 - L3 LINE CR1 -23 1554 1336 198 0 0 0 chr2 191110684 191110706 -59577148 + (TAGA)n Simple_repeat Simple_repeat 1 22 0 254 214 22 45 chr2 191111058 191111147 -59576707 - L2 LINE L2 -245 3068 2982 1289 218 11 48 chr2 191111437 191111795 -59576059 - L1 LINE L1 -1148 4998 4654 * 5315 133 48 11 chr2 191111783 191112806 -59575048 + L1PA16 LINE L1 5088 6157 -9 2817 193 143 30 chr2 191113545 191114223 -59573631 + ERVL LTR ERVL 3437 4191 -1573 215 133 22 0 chr2 191114352 191114397 -59573457 + (TG)n Simple_repeat Simple_repeat 1 46 0 1865 114 4 4 chr2 191115678 191115950 -59571904 + AluSp SINE Alu 25 296 -17 2205 77 40 0 chr2 191116386 191116685 -59571169 - AluY SINE Alu 0 311 1 216 0 0 0 chr2 191118001 191118025 -59569829 + (TTTTTA)n Simple_repeat Simple_repeat 5 28 0 246 100 0 67 chr2 191118992 191119052 -59568802 - L1MA6 LINE L1 -1 6299 6244 * 994 157 6 6 chr2 191119051 191119229 -59568625 + L1MA6 LINE L1 6068 6245 -55 444 309 81 73 chr2 191120132 191120391 -59567463 + MIR SINE MIR 2 262 0 732 321 87 41 chr2 191120968 191121556 -59566298 + MLT1L LTR MaLR 1 615 0 22 56 0 0 chr2 191122591 191122627 -59565227 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 191122975 191122997 -59564857 + AT_rich Low_complexity Low_complexity 1 22 0 288 242 109 31 chr2 191123124 191123252 -59564602 + L1ME4a LINE L1 5982 6119 -2 798 211 0 7 chr2 191124390 191124537 -59563317 + AluJo SINE Alu 3 148 -164 278 123 0 88 chr2 191124540 191124597 -59563257 + FAM SINE Alu 115 166 -13 2453 60 0 16 chr2 191124610 191124926 -59562928 - AluY SINE Alu 0 311 1 301 253 110 65 chr2 191125143 191125297 -59562557 + LTR16A1 LTR ERVL 222 382 -75 349 242 141 0 chr2 191125300 191125428 -59562426 - MER53 DNA DNA -1 188 43 285 305 0 0 chr2 191125445 191125527 -59562327 + LTR16A1 LTR ERVL 376 457 0 1796 138 9 63 chr2 191125857 191126176 -59561678 + AluSx SINE Alu 1 302 -10 275 324 88 0 chr2 191126733 191126835 -59561019 + MIR3 SINE MIR 87 197 -11 25 83 0 0 chr2 191128284 191128344 -59559510 + AT_rich Low_complexity Low_complexity 1 60 0 22 35 0 0 chr2 191128621 191128650 -59559204 + AT_rich Low_complexity Low_complexity 1 29 0 199 360 32 28 chr2 191130650 191130771 -59557083 - MIR SINE MIR -67 141 19 273 57 0 0 chr2 191131726 191131761 -59556093 + (CA)n Simple_repeat Simple_repeat 2 36 0 2203 116 0 0 chr2 191131966 191132269 -59555585 - AluSx SINE Alu -9 303 1 800 240 18 9 chr2 191132304 191132521 -59555333 - L1MB4 LINE L1 0 6180 5962 2919 203 35 1 chr2 191132781 191133695 -59554159 + L1PA16 LINE L1 4851 5788 -378 5973 196 207 26 chr2 191133719 191135161 -59552693 + MER52A LTR ERV1 1 1704 -51 1992 146 60 3 chr2 191135177 191135526 -59552328 + L1PA16 LINE L1 5785 6153 -13 225 103 0 0 chr2 191137050 191137089 -59550765 - Alu SINE Alu 0 302 264 1353 195 27 4 chr2 191137089 191137346 -59550508 - AluJb SINE Alu -14 298 36 919 250 43 59 chr2 191137417 191137789 -59550065 - MER97b DNA MER1_type? -466 587 222 508 231 0 8 chr2 191137789 191137906 -59549948 - MER52A LTR ERV1 -1 1754 1639 * 1472 215 134 41 chr2 191137904 191138473 -59549381 - MER52A LTR ERV1 -1049 706 1 810 186 42 0 chr2 191138473 191138635 -59549219 - MER97a DNA MER1_type? -668 226 58 4222 197 74 41 chr2 191138848 191140771 -59547083 - MER52A LTR ERV1 0 1755 6 22 0 0 0 chr2 191142251 191142273 -59545581 + AT_rich Low_complexity Low_complexity 1 22 0 275 253 121 11 chr2 191142661 191142752 -59545102 + MLT1L LTR MaLR 148 248 -367 329 269 94 20 chr2 191142844 191142993 -59544861 + MLT1L LTR MaLR 444 603 -12 34 0 0 0 chr2 191143157 191143191 -59544663 + AT_rich Low_complexity Low_complexity 1 34 0 28 48 0 0 chr2 191143534 191143576 -59544278 + AT_rich Low_complexity Low_complexity 1 42 0 198 143 0 0 chr2 191143707 191143742 -59544112 + (TG)n Simple_repeat Simple_repeat 1 35 0 604 308 36 36 chr2 191144315 191144539 -59543315 + MIR SINE MIR 21 244 -18 429 289 6 19 chr2 191144928 191145087 -59542767 + (CATA)n Simple_repeat Simple_repeat 4 160 0 24 32 0 0 chr2 191145318 191145349 -59542505 + AT_rich Low_complexity Low_complexity 1 31 0 24 67 0 0 chr2 191145863 191145908 -59541946 + AT_rich Low_complexity Low_complexity 1 45 0 203 235 0 15 chr2 191146977 191147045 -59540809 + CT-rich Low_complexity Low_complexity 4 70 0 1903 106 28 25 chr2 191147085 191147368 -59540486 + AluSg SINE Alu 27 310 0 345 308 64 98 chr2 191149374 191149783 -59538071 + L1MEd LINE L1 807 1201 -4918 322 313 30 26 chr2 191149879 191150109 -59537745 + HAL1 LINE L1 1412 1642 -865 240 35 0 0 chr2 191150324 191150353 -59537501 + (TG)n Simple_repeat Simple_repeat 1 29 0 288 167 30 30 chr2 191151727 191151793 -59536061 - L1MA9 LINE L1 -387 5925 5860 723 152 18 36 chr2 191151795 191151960 -59535894 + L1MA7 LINE L1 6129 6290 -1 21 36 0 0 chr2 191153592 191153620 -59534234 + AT_rich Low_complexity Low_complexity 1 28 0 2066 239 18 44 chr2 191154065 191154633 -59533221 + MLT1E2 LTR MaLR 72 624 -2 2846 182 108 49 chr2 191156334 191157093 -59530761 - MER52A LTR ERV1 -854 901 1 292 364 73 20 chr2 191158032 191158279 -59529575 + L3 LINE CR1 551 810 -767 674 265 86 43 chr2 191158295 191158771 -59529083 + LTR28 LTR ERV1 1 1243 -137 22 35 0 0 chr2 191159033 191159062 -59528792 + AT_rich Low_complexity Low_complexity 1 29 0 951 153 13 0 chr2 191159998 191160148 -59527706 - FRAM SINE Alu -31 145 1 291 289 84 74 chr2 191160402 191160592 -59527262 + MIR SINE MIR 14 205 -57 238 179 36 0 chr2 191160592 191160648 -59527206 + (TA)n Simple_repeat Simple_repeat 1 58 0 194 349 15 15 chr2 191160687 191160753 -59527101 + MIR SINE MIR 197 262 0 691 255 12 4 chr2 191160770 191160996 -59526858 + MER89 LTR ERV1 1 327 -232 5856 197 37 52 chr2 191160996 191161604 -59526250 + LTR28-int LTR ERV1 177 793 -6008 1793 151 37 0 chr2 191161604 191161902 -59525952 - AluSx SINE Alu -3 309 1 5856 197 37 52 chr2 191161902 191162707 -59525147 + LTR28-int LTR ERV1 793 1568 -5233 1307 216 4 11 chr2 191162720 191162993 -59524861 + AluJb SINE Alu 4 274 -38 1731 156 101 9 chr2 191163008 191163335 -59524519 + LTR28-int LTR ERV1 1560 1916 -4885 414 213 0 0 chr2 191163335 191163429 -59524425 + (TATATG)n Simple_repeat Simple_repeat 5 98 0 3232 188 26 3 chr2 191163430 191164035 -59523819 + LTR28-int LTR ERV1 1912 2530 -4271 26 101 0 0 chr2 191164068 191164157 -59523697 + AT_rich Low_complexity Low_complexity 1 89 0 5455 232 61 5 chr2 191164230 191165559 -59522295 + MER89-int LTR ERV1 5398 6801 0 1277 233 70 11 chr2 191165559 191165970 -59521884 + MER89 LTR ERV1 1 536 -23 2945 161 42 102 chr2 191165977 191166758 -59521096 + MER50 LTR ERV1 1 734 0 1791 137 84 37 chr2 191166993 191167399 -59520455 - THE1C LTR MaLR 0 428 3 23 78 0 0 chr2 191167595 191167646 -59520208 + AT_rich Low_complexity Low_complexity 1 51 0 11759 215 20 23 chr2 191167652 191171974 -59515880 - L1PA16 LINE L1 0 6869 2443 189 0 0 0 chr2 191171974 191171995 -59515859 + (TTTTC)n Simple_repeat Simple_repeat 4 24 0 11759 215 20 23 chr2 191171995 191174430 -59513424 - L1PA16 LINE L1 -4426 2443 1 24 0 0 0 chr2 191175647 191175671 -59512183 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 191175849 191175877 -59511977 + AT_rich Low_complexity Low_complexity 1 28 0 291 128 0 0 chr2 191176152 191176199 -59511655 - L1MA1 LINE L1 -4 6298 6252 29 47 0 0 chr2 191176263 191176306 -59511548 + AT_rich Low_complexity Low_complexity 1 43 0 198 176 0 0 chr2 191176327 191176378 -59511476 + (TA)n Simple_repeat Simple_repeat 1 51 0 271 310 14 78 chr2 191176699 191176841 -59511013 - MIR SINE MIR -79 183 51 182 88 0 29 chr2 191177724 191177758 -59510096 + (GGAAA)n Simple_repeat Simple_repeat 1 33 0 371 250 46 13 chr2 191178519 191178539 -59509315 - L1MA10 LINE L1 -1 6333 6314 764 235 58 14 chr2 191178539 191178826 -59509028 - L1ME1 LINE L1 -12 6154 5808 1966 148 7 0 chr2 191178853 191179151 -59508703 + AluSg SINE Alu 1 300 -10 1148 257 87 40 chr2 191179164 191179716 -59508138 - L1M4 LINE L1 -2039 4107 3530 435 120 11 22 chr2 191179822 191179914 -59507940 + (TCC)n Simple_repeat Simple_repeat 3 93 0 38 0 0 0 chr2 191180057 191180095 -59507759 + AT_rich Low_complexity Low_complexity 1 38 0 1356 86 0 11 chr2 191180096 191180283 -59507571 - AluY SINE Alu -24 287 103 2224 115 0 0 chr2 191180430 191180735 -59507119 + AluSx SINE Alu 1 305 -7 814 211 33 0 chr2 191182896 191183076 -59504778 + L1MC1 LINE L1 5999 6184 -149 387 56 0 0 chr2 191183199 191183253 -59504601 + (CA)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr2 191184118 191184139 -59503715 + AT_rich Low_complexity Low_complexity 1 21 0 260 256 131 6 chr2 191184668 191184828 -59503026 - MER69 DNA AcHobo 0 2526 2347 293 255 10 134 chr2 191184828 191184840 -59503014 - MER69 DNA AcHobo -1346 1180 1168 2002 178 40 83 chr2 191184840 191185368 -59502486 - MLT1D LTR MaLR 0 505 1 293 255 10 134 chr2 191185368 191185645 -59502209 - MER69 DNA AcHobo -1358 1168 927 605 230 84 34 chr2 191185733 191185911 -59501943 - MER69 DNA AcHobo -2332 194 8 1645 131 105 4 chr2 191187012 191187279 -59500575 + AluSx SINE Alu 3 296 -16 22 0 0 0 chr2 191187408 191187430 -59500424 + AT_rich Low_complexity Low_complexity 1 22 0 308 324 28 35 chr2 191187456 191187598 -59500256 - L1ME1 LINE L1 -477 5644 5504 27 29 0 0 chr2 191188794 191188828 -59499026 + AT_rich Low_complexity Low_complexity 1 34 0 261 326 132 0 chr2 191189327 191189456 -59498398 + MIR3 SINE MIR 36 181 -27 442 182 0 0 chr2 191190301 191190389 -59497465 - L1M4 LINE L1 -3090 3056 2969 307 316 89 47 chr2 191190423 191190613 -59497241 + L1ME LINE L1 5148 5345 -801 258 329 58 22 chr2 191190791 191190928 -59496926 + L1ME LINE L1 5508 5649 -515 31 76 0 0 chr2 191191099 191191165 -59496689 + AT_rich Low_complexity Low_complexity 1 66 0 1954 118 16 3 chr2 191191351 191191655 -59496199 - AluSp SINE Alu -5 308 1 2406 77 0 6 chr2 191193520 191193833 -59494021 + AluY SINE Alu 1 311 0 562 110 50 0 chr2 191195386 191195486 -59492368 - L1MB4 LINE L1 0 6180 6076 265 245 0 0 chr2 191197539 191197592 -59490262 + MIR SINE MIR 7 59 -203 314 237 17 85 chr2 191197922 191198040 -59489814 - Charlie7 DNA MER1_type -2502 110 1 197 278 19 0 chr2 191198085 191198139 -59489715 + L2 LINE L2 3255 3309 -4 257 218 172 35 chr2 191199968 191200055 -59487799 + MIR SINE MIR 66 164 -98 458 227 18 9 chr2 191201053 191201163 -59486691 + MER8 DNA MER2_type 1 111 -128 329 289 72 13 chr2 191201714 191201866 -59485988 + MIR SINE MIR 86 246 -16 25 65 0 0 chr2 191202102 191202148 -59485706 + AT_rich Low_complexity Low_complexity 1 46 0 214 351 78 19 chr2 191202792 191202946 -59484908 + MER5A DNA MER1_type 23 185 -4 233 296 70 0 chr2 191203190 191203261 -59484593 - MIR SINE MIR -21 241 166 301 210 16 0 chr2 191203373 191203435 -59484419 - MIR SINE MIR -123 139 77 22 0 0 0 chr2 191204151 191204173 -59483681 + AT_rich Low_complexity Low_complexity 1 22 0 512 232 48 0 chr2 191204175 191204300 -59483554 + MER94 DNA DNA 2 132 -2 6433 73 3 58 chr2 191204305 191206002 -59481852 - L1PA7 LINE L1 0 6154 4392 245 246 0 0 chr2 191206368 191206433 -59481421 + GA-rich Low_complexity Low_complexity 2 66 0 1857 95 15 23 chr2 191206989 191207252 -59480602 + AluSq SINE Alu 37 297 -16 1611 171 69 17 chr2 191208377 191208723 -59479131 + MLT1A1 LTR MaLR 2 365 0 1580 183 59 56 chr2 191209354 191209780 -59478074 - MSTC LTR MaLR 0 428 2 1562 215 17 20 chr2 191209844 191210202 -59477652 + MLT1A1 LTR MaLR 1 357 -8 1196 300 73 27 chr2 191210435 191210911 -59476943 + L2 LINE L2 48 545 -2769 1325 275 40 47 chr2 191210982 191211443 -59476411 + MER90 LTR ERV1 1 459 -116 2827 3 0 0 chr2 191211443 191211751 -59476103 + AluYa5 SINE Alu 1 308 -3 1325 275 40 47 chr2 191211751 191211868 -59475986 + MER90 LTR ERV1 459 575 0 2344 99 15 84 chr2 191212017 191212420 -59475434 + THE1C LTR MaLR 1 375 0 1605 209 30 25 chr2 191212773 191212816 -59475038 - MLT2C1 LTR ERVL 0 397 356 330 26 0 0 chr2 191212816 191212855 -59474999 + (TG)n Simple_repeat Simple_repeat 2 40 0 1605 209 30 25 chr2 191212855 191213166 -59474688 - MLT2C1 LTR ERVL -41 356 38 1902 114 75 36 chr2 191213166 191213525 -59474329 + THE1C LTR MaLR 1 373 -2 1605 209 30 25 chr2 191213525 191213562 -59474292 - MLT2C1 LTR ERVL -359 38 3 1493 182 11 66 chr2 191213890 191214253 -59473601 + MER2 DNA MER2_type 1 343 -1 2534 44 0 13 chr2 191215215 191215530 -59472324 + AluY SINE Alu 1 311 0 198 158 123 35 chr2 191216465 191216522 -59471332 + L2 LINE L2 3252 3313 0 23 0 0 0 chr2 191217111 191217134 -59470720 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr2 191217783 191217821 -59470033 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 191218025 191218049 -59469805 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr2 191218128 191218151 -59469703 + AT_rich Low_complexity Low_complexity 1 23 0 320 306 141 91 chr2 191220731 191221335 -59466519 + L1M2 LINE L1 586 1219 -5630 317 287 119 98 chr2 191221010 191221438 -59466416 - L1M2 LINE L1 -5925 924 488 * 26 30 0 0 chr2 191223217 191223250 -59464604 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 191223587 191223608 -59464246 + AT_rich Low_complexity Low_complexity 1 21 0 199 354 26 26 chr2 191225486 191225599 -59462255 + MIR3 SINE MIR 92 204 -4 328 279 27 103 chr2 191226107 191226369 -59461485 + L1ME LINE L1 5563 5804 -358 619 249 161 57 chr2 191226901 191227322 -59460532 - L2 LINE L2 -975 2339 1875 776 247 21 11 chr2 191227671 191227857 -59459997 - MLT1A2 LTR MaLR 0 374 187 21 0 0 0 chr2 191228250 191228271 -59459583 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr2 191228525 191228580 -59459274 + AT_rich Low_complexity Low_complexity 1 55 0 3967 146 9 7 chr2 191228758 191229436 -59458418 + L1PA16 LINE L1 5488 6166 0 386 307 71 20 chr2 191230142 191230396 -59457458 + L1ME LINE L1 5535 5801 -320 566 229 0 8 chr2 191230459 191230590 -59457264 + FLAM_C SINE Alu 13 142 -1 310 360 20 7 chr2 191230961 191231114 -59456740 + L2 LINE L2 3159 3313 0 655 309 60 54 chr2 191231387 191231736 -59456118 - MLT1J LTR MaLR -143 368 18 2326 65 0 26 chr2 191231957 191232266 -59455588 - AluY SINE Alu -10 301 1 304 250 0 0 chr2 191232784 191232852 -59455002 + L1MC4 LINE L1 6636 6703 -1339 1105 235 71 11 chr2 191232875 191233023 -59454831 - AluJb SINE Alu -18 284 146 200 59 29 0 chr2 191233023 191233057 -59454797 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1105 235 71 11 chr2 191233057 191233176 -59454678 - AluJb SINE Alu -156 146 1 669 176 19 146 chr2 191233531 191233591 -59454263 - MER5A DNA MER1_type -4 185 119 5518 138 7 1 chr2 191233591 191234548 -59453306 + L1PA14 LINE L1 5200 6161 0 669 176 19 146 chr2 191234548 191234692 -59453162 - MER5A DNA MER1_type -70 119 7 21 36 0 0 chr2 191234933 191234961 -59452893 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 191235661 191235686 -59452168 + AT_rich Low_complexity Low_complexity 1 25 0 1720 197 125 4 chr2 191235692 191236566 -59451288 - L1MC2 LINE L1 -25 6319 5343 35 24 0 0 chr2 191236996 191237038 -59450816 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr2 191237078 191237107 -59450747 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 191237183 191237204 -59450650 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 191238773 191238803 -59449051 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr2 191239912 191239949 -59447905 + AT_rich Low_complexity Low_complexity 1 37 0 3617 179 163 93 chr2 191240308 191240838 -59447016 - L1MC3 LINE L1 -7 8196 7705 231 278 22 11 chr2 191240838 191240928 -59446926 - MLT1F1 LTR MaLR -442 125 35 3617 179 163 93 chr2 191240928 191241544 -59446310 - L1MC3 LINE L1 -498 7705 6874 1430 164 125 17 chr2 191241574 191241942 -59445912 + MSTB1 LTR MaLR 1 457 0 2913 228 22 17 chr2 191241948 191242702 -59445152 - L1MC3 LINE L1 -1390 6813 6056 752 219 27 0 chr2 191242705 191242892 -59444962 - L1MC3 LINE L1 -3488 3076 2885 898 193 74 59 chr2 191242900 191243102 -59444752 - AluJb SINE Alu -105 207 3 249 250 0 14 chr2 191243104 191243176 -59444678 - L1MC3 LINE L1 -4843 1721 1651 2093 105 0 10 chr2 191243209 191243503 -59444351 - AluSc SINE Alu -6 303 13 319 79 0 5 chr2 191243503 191243556 -59444298 - Alu SINE Alu -268 40 1 1509 209 55 65 chr2 191243557 191243673 -59444181 - L1MC3 LINE L1 -4967 1597 1481 2578 94 16 8 chr2 191243673 191244045 -59443809 + THE1C LTR MaLR 1 375 0 1509 209 55 65 chr2 191244045 191244494 -59443360 - L1MC3 LINE L1 -5083 1481 1038 1455 143 238 12 chr2 191244499 191244835 -59443019 + MSTA LTR MaLR 1 412 -16 1206 216 26 75 chr2 191244836 191245225 -59442629 - L1MC3 LINE L1 -5015 1030 661 1302 180 39 134 chr2 191245235 191245719 -59442135 + MLT2A2 LTR ERVL 16 453 0 1555 105 9 0 chr2 191245952 191246181 -59441673 - L1PA8 LINE L1 -2 6170 5940 709 276 33 33 chr2 191247243 191247515 -59440339 + MLT2C1 LTR ERVL 126 397 0 37 0 0 0 chr2 191247632 191247669 -59440185 + AT_rich Low_complexity Low_complexity 1 37 0 1052 284 46 7 chr2 191247711 191248110 -59439744 - L1ME1 LINE L1 -67 6099 5717 243 299 58 11 chr2 191248165 191248252 -59439602 - L2 LINE L2 0 3272 3182 259 318 113 26 chr2 191248457 191248608 -59439246 + MIR3 SINE MIR 38 201 -7 226 319 0 0 chr2 191249774 191249843 -59438011 + (TG)n Simple_repeat Simple_repeat 2 70 0 454 199 87 114 chr2 191249918 191250311 -59437543 + L1M4 LINE L1 2809 3190 -2956 1112 277 45 52 chr2 191250521 191251239 -59436615 + L1M4 LINE L1 3881 4593 -1553 282 302 32 55 chr2 191251541 191251700 -59436154 + MLT1K LTR MaLR 412 593 -22 2226 45 52 14 chr2 191251771 191252061 -59435793 + AluY SINE Alu 3 303 -8 319 257 46 28 chr2 191252871 191252980 -59434874 + MIR SINE MIR 104 214 -48 21 36 0 0 chr2 191252983 191253011 -59434843 + AT_rich Low_complexity Low_complexity 1 28 0 690 241 101 34 chr2 191253081 191253318 -59434536 - MIR SINE MIR 0 262 10 27 0 0 0 chr2 191253348 191253375 -59434479 + AT_rich Low_complexity Low_complexity 1 27 0 2651 3 0 0 chr2 191253760 191254049 -59433805 + AluYa5 SINE Alu 1 289 -22 1322 178 23 11 chr2 191254152 191254416 -59433438 + MER61A LTR ERV1 77 343 0 2668 172 25 6 chr2 191254417 191254941 -59432913 + L1MB8 LINE L1 5640 6173 -5 481 269 61 45 chr2 191254943 191255132 -59432722 + L1MC4a LINE L1 5811 6006 -1802 2073 104 0 63 chr2 191255132 191255450 -59432404 + AluSx SINE Alu 1 298 -14 481 269 61 45 chr2 191255450 191255505 -59432349 + L1MC4a LINE L1 6006 6059 -1749 1352 146 55 0 chr2 191255609 191255829 -59432025 - MER34C LTR ERV1 -353 232 1 689 215 103 90 chr2 191255911 191256232 -59431622 + MER34C LTR ERV1 36 360 -225 2800 162 59 8 chr2 191256276 191256770 -59431084 - LTR26E LTR ERV1 0 622 104 1127 186 4 30 chr2 191256959 191257196 -59430658 - AluJo SINE Alu -19 293 63 3499 109 187 74 chr2 191257278 191258515 -59429339 - pTR5 LTR ERV1 0 2438 913 243 0 0 0 chr2 191258768 191258795 -59429059 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr2 191258872 191258895 -59428959 + AT_rich Low_complexity Low_complexity 1 23 0 4515 139 30 9 chr2 191260202 191261010 -59426844 + MER52A-int LTR ERV1 4187 5011 -2526 1528 135 31 9 chr2 191260993 191261429 -59426425 + MER52A-int LTR ERV1 4918 7091 0 * 7357 206 99 17 chr2 191261429 191263050 -59424804 + MER52A LTR ERV1 1 1755 0 221 282 84 0 chr2 191264140 191264211 -59423643 - L2 LINE L2 -4 3309 3233 369 0 0 0 chr2 191264530 191264571 -59423283 + (TG)n Simple_repeat Simple_repeat 2 42 0 1351 221 46 79 chr2 191265059 191265579 -59422275 - MLT1D LTR MaLR 0 505 3 266 228 0 0 chr2 191265933 191265990 -59421864 - MIR SINE MIR -108 154 98 216 376 45 25 chr2 191266897 191267054 -59420800 + L3 LINE CR1 39 198 -1379 28 29 0 0 chr2 191267112 191267147 -59420707 + AT_rich Low_complexity Low_complexity 1 35 0 1391 238 26 1 chr2 191267565 191267663 -59420191 - L1M3 LINE L1 -584 5584 5490 360 0 0 0 chr2 191267663 191267703 -59420151 + (TAGA)n Simple_repeat Simple_repeat 1 40 0 1391 238 26 1 chr2 191267703 191268150 -59419704 - L1M3 LINE L1 -678 5490 5025 602 186 109 13 chr2 191268285 191268301 -59419553 - Ricksha DNA DNA -2882 364 334 7119 106 8 6 chr2 191268301 191268594 -59419260 - HERVL LTR ERVL 0 5654 5363 2259 114 0 0 chr2 191268594 191268902 -59418952 + AluSg SINE Alu 1 308 -2 7119 106 8 6 chr2 191268902 191269622 -59418232 - HERVL LTR ERVL -291 5363 4639 3195 149 47 95 chr2 191269622 191270628 -59417226 + MER52C LTR ERV1 1 1276 -2 7031 116 10 8 chr2 191270628 191271655 -59416199 - HERVL LTR ERVL -1010 4644 3616 385 78 0 0 chr2 191271655 191271706 -59416148 - MLT2A2 LTR ERVL -402 51 1 26 88 0 0 chr2 191272735 191272803 -59415051 + AT_rich Low_complexity Low_complexity 1 68 0 21 36 0 0 chr2 191272916 191272944 -59414910 + AT_rich Low_complexity Low_complexity 1 28 0 448 296 21 0 chr2 191274013 191274155 -59413699 - MIR SINE MIR 0 262 118 2429 52 0 19 chr2 191274592 191274899 -59412955 - AluY SINE Alu -10 301 1 261 329 6 87 chr2 191275499 191275660 -59412194 - L2 LINE L2 0 3272 3125 345 350 81 0 chr2 191276348 191276471 -59411383 + L2 LINE L2 3180 3312 -1 280 229 79 174 chr2 191276734 191276987 -59410867 + MLT1J LTR MaLR 153 381 -130 1565 174 73 23 chr2 191277563 191277907 -59409947 - L1MB5 LINE L1 -8 6166 5806 25 31 0 0 chr2 191277949 191277981 -59409873 + AT_rich Low_complexity Low_complexity 1 32 0 674 258 54 32 chr2 191279190 191279469 -59408385 - L1M3 LINE L1 -1474 4672 4388 208 188 21 0 chr2 191279469 191279517 -59408337 + (TA)n Simple_repeat Simple_repeat 2 50 0 447 19 0 0 chr2 191279549 191279601 -59408253 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 207 0 0 0 chr2 191279601 191279624 -59408230 + (TG)n Simple_repeat Simple_repeat 2 24 0 539 288 48 22 chr2 191279627 191279856 -59407998 + L1M4 LINE L1 3376 3610 -2536 27 29 0 0 chr2 191279916 191279950 -59407904 + AT_rich Low_complexity Low_complexity 1 34 0 2727 256 31 84 chr2 191279952 191281539 -59406315 - L1M3 LINE L1 -2260 3886 2384 25 0 0 0 chr2 191281619 191281644 -59406210 + AT_rich Low_complexity Low_complexity 1 25 0 1591 205 0 10 chr2 191282550 191282852 -59405002 - AluJb SINE Alu -9 303 5 26 30 0 0 chr2 191282965 191282998 -59404856 + AT_rich Low_complexity Low_complexity 1 33 0 2843 173 4 6 chr2 191283005 191283503 -59404351 - LOR1a LTR ERV1 0 497 1 379 304 25 25 chr2 191284172 191284330 -59403524 - L2 LINE L2 0 3313 3156 1474 229 56 18 chr2 191284344 191284794 -59403060 + MLT1C LTR MaLR 1 467 0 2624 244 21 1 chr2 191284795 191285513 -59402341 + L1M4 LINE L1 2635 3366 -2780 1182 224 87 31 chr2 191286300 191286646 -59401208 - Tigger7 DNA MER2_type 0 2491 2 6585 31 0 37 chr2 191287584 191288412 -59399442 - L1PA3 LINE L1 -3 6152 5356 333 226 0 6 chr2 191288818 191288904 -59398950 - L1MB5 LINE L1 -503 5681 5599 837 296 28 55 chr2 191289053 191289512 -59398342 + L1ME3A LINE L1 5582 6028 -142 1234 269 93 22 chr2 191289547 191289964 -59397890 - MLT1E LTR MaLR -35 544 114 307 209 45 0 chr2 191289967 191290077 -59397777 + CT-rich Low_complexity Low_complexity 2 116 0 729 193 14 14 chr2 191290088 191290375 -59397479 + CT-rich Low_complexity Low_complexity 1 287 0 1248 224 3 37 chr2 191290377 191290676 -59397178 - AluJo SINE Alu -21 291 3 424 206 140 9 chr2 191290682 191290789 -59397065 - MLT1E LTR MaLR -466 127 7 1428 272 142 26 chr2 191290875 191291685 -59396169 - L1MB5 LINE L1 -1326 4820 3917 1312 281 95 18 chr2 191291697 191292434 -59395420 - L1MB5 LINE L1 -2309 3837 3044 465 286 74 87 chr2 191292491 191293463 -59394391 - L1MEc LINE L1 -4618 1778 820 670 228 51 100 chr2 191293490 191293746 -59394108 + MLT1A2 LTR MaLR 1 239 -151 223 214 18 0 chr2 191293768 191293824 -59394030 + (TAA)n Simple_repeat Simple_repeat 3 59 0 228 310 23 41 chr2 191293954 191294125 -59393729 + LTR30 LTR ERV1 351 518 -204 551 270 26 7 chr2 191294261 191294413 -59393441 + MLT1A2 LTR MaLR 236 390 0 743 341 10 10 chr2 191294763 191295068 -59392786 - L1MEc LINE L1 -5980 416 112 310 336 201 6 chr2 191295180 191295516 -59392338 - L2 LINE L2 -229 3084 2681 24 0 0 0 chr2 191295536 191295560 -59392294 + AT_rich Low_complexity Low_complexity 1 24 0 529 246 173 16 chr2 191295577 191295768 -59392086 - MIR SINE MIR -22 240 20 1936 172 21 21 chr2 191296063 191296446 -59391408 - L1PA16 LINE L1 -2 6164 5782 764 236 93 0 chr2 191297132 191297314 -59390540 + MLT1B LTR MaLR 190 388 -2 198 143 0 0 chr2 191298248 191298283 -59389571 + (TA)n Simple_repeat Simple_repeat 1 35 0 826 105 13 13 chr2 191298939 191299170 -59388684 + (TA)n Simple_repeat Simple_repeat 1 231 0 3521 202 26 16 chr2 191299218 191300487 -59387367 + MER52A LTR ERV1 374 1755 0 3345 153 18 26 chr2 191300487 191301056 -59386798 + MER52A-int LTR ERV1 1 564 -6527 3725 136 14 2 chr2 191301179 191301752 -59386102 + MER52A-int LTR ERV1 1698 2277 -4814 4432 183 47 58 chr2 191301752 191302874 -59384980 + MER61-int LTR ERV1 689 4824 -393 4335 191 9 24 chr2 191302884 191304106 -59383748 + MER61-int LTR ERV1 1224 4817 -2179 4766 191 40 7 chr2 191304211 191305294 -59382560 + L1 LINE L1 3903 5021 -1125 248 326 67 11 chr2 191305379 191305468 -59382386 - L2 LINE L2 -10 3303 3210 363 270 39 45 chr2 191306090 191306268 -59381586 - HAL1 LINE L1 -105 2402 2226 3000 246 52 17 chr2 191306394 191307276 -59380578 - L1MD2 LINE L1 -2 6357 5445 214 175 16 32 chr2 191307287 191307350 -59380504 + (TA)n Simple_repeat Simple_repeat 2 63 0 710 274 186 9 chr2 191307500 191307930 -59379924 - HAL1 LINE L1 -623 1884 1379 * 950 306 135 51 chr2 191307911 191308757 -59379097 - HAL1 LINE L1 -1589 918 2 230 254 51 0 chr2 191309587 191309646 -59378208 + L3 LINE CR1 1514 1575 -2 336 399 89 6 chr2 191311250 191311576 -59376278 + L2 LINE L2 2428 2780 -534 1798 148 101 44 chr2 191311665 191312070 -59375784 + MSTA LTR MaLR 1 428 0 26 0 0 0 chr2 191312249 191312275 -59375579 + AT_rich Low_complexity Low_complexity 1 26 0 5346 152 24 5 chr2 191312476 191313401 -59374453 + L1PA16 LINE L1 5217 6158 -8 2223 209 20 36 chr2 191314102 191314770 -59373084 + L1MB2 LINE L1 5555 6169 -2 386 323 32 32 chr2 191314827 191314982 -59372872 - MIR3 SINE MIR -14 194 40 271 232 18 9 chr2 191315646 191315758 -59372096 + (TA)n Simple_repeat Simple_repeat 2 114 0 24 32 0 0 chr2 191315925 191315956 -59371898 + AT_rich Low_complexity Low_complexity 1 31 0 211 111 22 22 chr2 191316018 191316063 -59371791 + CT-rich Low_complexity Low_complexity 3 47 0 23 33 0 0 chr2 191316561 191316591 -59371263 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 191317697 191317718 -59370136 + AT_rich Low_complexity Low_complexity 1 21 0 354 331 15 44 chr2 191318112 191318248 -59369606 + L2 LINE L2 3141 3272 0 22 80 0 0 chr2 191318654 191318704 -59369150 + AT_rich Low_complexity Low_complexity 1 50 0 4362 50 0 2 chr2 191318786 191319330 -59368524 - L1P LINE L1 -1846 4300 3758 912 155 13 0 chr2 191319327 191319482 -59368372 - L1MA5A LINE L1 -340 5957 5801 * 5157 57 1 0 chr2 191319479 191320142 -59367712 + L1PA6 LINE L1 4290 4953 -1193 6551 61 2 0 chr2 191320149 191320985 -59366869 + L1PA6 LINE L1 5312 6149 -5 349 261 35 28 chr2 191321047 191321189 -59366665 + L1ME LINE L1 2219 2361 -3785 720 289 101 35 chr2 191321225 191321682 -59366172 + L1ME LINE L1 5336 5822 -348 26 88 0 0 chr2 191322027 191322095 -59365759 + AT_rich Low_complexity Low_complexity 1 68 0 29 0 0 0 chr2 191323479 191323508 -59364346 + AT_rich Low_complexity Low_complexity 1 29 0 30 27 0 0 chr2 191323806 191323843 -59364011 + AT_rich Low_complexity Low_complexity 1 37 0 31 0 0 0 chr2 191323869 191323900 -59363954 + AT_rich Low_complexity Low_complexity 1 31 0 7536 31 3 0 chr2 191323900 191324950 -59362904 - L1PA3 LINE L1 0 6155 5106 221 352 9 0 chr2 191325167 191325275 -59362579 + (TA)n Simple_repeat Simple_repeat 1 109 0 * 229 301 0 12 chr2 191325199 191325282 -59362572 + (CATA)n Simple_repeat Simple_repeat 2 83 0 5156 184 39 30 chr2 191325293 191326030 -59361824 - L1 LINE L1 -1903 4243 3489 5767 98 30 0 chr2 191326030 191327492 -59360362 - L1PA11 LINE L1 -2 6172 4646 186 43 0 0 chr2 191327492 191327515 -59360339 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5767 98 30 0 chr2 191327515 191327652 -59360202 - L1PA11 LINE L1 -1528 4646 4515 5156 184 39 30 chr2 191327652 191328127 -59359727 - L1 LINE L1 -2657 3489 3020 * 5373 167 18 36 chr2 191328120 191329390 -59358464 + L1MA5A LINE L1 5048 6294 -3 1987 134 0 0 chr2 191329492 191329805 -59358049 - AluSx SINE Alu 0 313 1 1044 130 0 6 chr2 191329982 191330143 -59357711 - L1P4 LINE L1 -485 5681 5522 5487 117 8 79 chr2 191330154 191331305 -59356549 - L1PA15 LINE L1 -7 6158 5051 524 232 8 0 chr2 191331305 191331430 -59356424 + L1PA15 LINE L1 4903 5028 -1118 248 293 0 0 chr2 191331525 191331583 -59356271 - MIR SINE MIR -55 153 96 939 294 91 21 chr2 191331686 191332070 -59355784 - MLT1E2 LTR MaLR -9 617 207 1801 159 7 10 chr2 191332501 191332803 -59355051 + AluJo SINE Alu 12 312 0 187 322 105 35 chr2 191332858 191333029 -59354825 + L2 LINE L2 2155 2337 -977 273 284 51 32 chr2 191334329 191334494 -59353360 + MIR SINE MIR 50 217 -45 204 323 0 0 chr2 191335978 191336040 -59351814 - L2 LINE L2 -5 3267 3206 352 367 28 73 chr2 191336191 191336439 -59351415 - L2 LINE L2 -199 3073 2837 907 249 78 9 chr2 191337494 191337815 -59350039 - L1MC4 LINE L1 -873 7169 6827 * 1861 238 126 31 chr2 191337813 191338585 -59349269 + L1MC4 LINE L1 7183 8027 -15 21 0 0 0 chr2 191338643 191338664 -59349190 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr2 191338717 191338749 -59349105 + AT_rich Low_complexity Low_complexity 1 32 0 209 173 39 0 chr2 191339543 191339595 -59348259 + (TA)n Simple_repeat Simple_repeat 1 54 0 180 365 91 24 chr2 191340383 191340766 -59347088 - L2 LINE L2 -2273 1041 633 304 257 14 14 chr2 191340780 191340854 -59347000 - MER81 DNA DNA -36 78 5 2175 140 19 25 chr2 191340854 191341219 -59346635 - THE1B LTR MaLR 0 364 2 4026 251 51 13 chr2 191542038 191543186 -59144668 - L1PA13 LINE L1 -4410 2387 1188 268 329 84 14 chr2 191543198 191543341 -59144513 - L1PA13 LINE L1 -5904 883 731 * 619 195 90 55 chr2 191543333 191543539 -59144315 - L1 LINE L1 -1938 4208 3975 8085 214 51 8 chr2 191543650 191543907 -59143947 - L1P LINE L1 -843 5303 5059 1822 164 29 40 chr2 191543907 191544284 -59143570 + THE1C LTR MaLR 3 375 0 8085 214 51 8 chr2 191544284 191544896 -59142958 - L1P LINE L1 -1087 5059 4475 432 55 0 0 chr2 191544896 191544951 -59142903 + (TG)n Simple_repeat Simple_repeat 1 55 0 8085 214 51 8 chr2 191544951 191546025 -59141829 - L1P LINE L1 -1671 4475 3275 4856 198 16 13 chr2 191546034 191547138 -59140716 + L1 LINE L1 4225 5332 -814 319 227 27 0 chr2 191547139 191547214 -59140640 - L1PA15-16 LINE L1 -4304 2545 2469 12404 113 3 19 chr2 191547358 191549646 -59138208 - HERVL-A2 LTR ERVL -1663 3991 88 2200 146 5 24 chr2 191549646 191550016 -59137838 - THE1B LTR MaLR -1 363 1 12404 113 3 19 chr2 191550016 191550103 -59137751 - HERVL-A2 LTR ERVL -5566 88 1 2065 177 37 27 chr2 191550103 191550645 -59137209 - MLT2A2 LTR ERVL 0 554 3 242 240 156 19 chr2 191550741 191550895 -59136959 - LTR33A LTR ERVL -50 473 299 283 290 131 57 chr2 191550967 191551143 -59136711 - LTR33 LTR ERVL -280 241 53 255 258 28 124 chr2 191551541 191551719 -59136135 + MIR SINE MIR 97 257 -5 22 70 0 0 chr2 191551924 191551967 -59135887 + AT_rich Low_complexity Low_complexity 1 43 0 605 263 244 7 chr2 191552120 191552394 -59135460 - L2 LINE L2 -562 2752 2414 10290 189 26 5 chr2 191552438 191554218 -59133636 + L1PA13 LINE L1 217 2034 -4753 1928 135 13 29 chr2 191554236 191554547 -59133307 + THE1B LTR MaLR 59 364 0 10218 160 10 5 chr2 191554547 191556119 -59131735 + THE1B-int LTR MaLR 1 1580 0 1860 142 84 29 chr2 191556119 191556464 -59131390 + THE1B LTR MaLR 1 364 0 4064 223 29 0 chr2 191556484 191557417 -59130437 + L1PA13 LINE L1 2049 3008 -3789 206 31 0 31 chr2 191557647 191557679 -59130175 + (TA)n Simple_repeat Simple_repeat 2 32 0 24 77 0 0 chr2 191558159 191558211 -59129643 + AT_rich Low_complexity Low_complexity 1 52 0 383 350 115 21 chr2 191559531 191559765 -59128089 - MIR SINE MIR -6 256 1 201 194 28 14 chr2 191560012 191560084 -59127770 + GA-rich Low_complexity Low_complexity 1 73 0 207 275 29 0 chr2 191560337 191560406 -59127448 - MIR SINE MIR -174 88 18 415 305 159 7 chr2 191560499 191560650 -59127204 - MER5A DNA MER1_type -6 183 10 3438 181 93 42 chr2 191560732 191561107 -59126747 + MER21A LTR ERV1 8 363 -568 342 0 0 0 chr2 191561107 191561145 -59126709 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3438 181 93 42 chr2 191561145 191561557 -59126297 + MER21A LTR ERV1 363 835 -96 1345 207 80 91 chr2 191562058 191562111 -59125743 - MLT2B1 LTR ERVL 0 520 468 510 17 0 0 chr2 191562111 191562170 -59125684 + (CA)n Simple_repeat Simple_repeat 2 60 0 1345 207 80 91 chr2 191562170 191562642 -59125212 - MLT2B1 LTR ERVL -52 468 1 452 310 53 26 chr2 191562981 191563207 -59124647 + MIR SINE MIR 5 236 -26 1065 143 11 0 chr2 191564248 191564423 -59123431 + L1P3 LINE L1 1331 1507 -4954 3093 79 0 5 chr2 191564552 191564970 -59122884 - L1P LINE L1 -4179 1967 1552 453 334 39 49 chr2 191565050 191565071 -59122783 + L1MEd LINE L1 913 933 -5186 2016 114 46 0 chr2 191565071 191565351 -59122503 + AluSq SINE Alu 1 293 -20 453 334 39 49 chr2 191565351 191565637 -59122217 + L1MEd LINE L1 933 1217 -4902 334 304 11 35 chr2 191565750 191565960 -59121894 + HAL1b LINE L1 362 1643 -864 1736 153 55 38 chr2 191566499 191566866 -59120988 - THE1C LTR MaLR 0 375 3 2276 134 21 16 chr2 191566978 191567351 -59120503 + THE1C LTR MaLR 1 375 0 1639 178 57 73 chr2 191567459 191567898 -59119956 - MSTB1 LTR MaLR 0 432 1 303 71 0 253 chr2 191568421 191568520 -59119334 + MADE1 DNA Mariner 7 80 0 292 298 179 34 chr2 191568540 191568802 -59119052 - L2 LINE L2 -527 2787 2488 1299 247 44 22 chr2 191568807 191569171 -59118683 - MLT1E3 LTR MaLR -5 619 248 404 132 59 0 chr2 191569171 191569239 -59118615 - THE1B LTR MaLR 0 375 304 1138 88 94 0 chr2 191569240 191569399 -59118455 - THE1B LTR MaLR -190 174 1 1514 61 10 0 chr2 191569399 191569596 -59118258 - THE1B-int LTR MaLR 0 1580 1382 4612 79 5 0 chr2 191569749 191570345 -59117509 + HERVL LTR ERVL 2829 3427 -2227 186 286 221 13 chr2 191571525 191571602 -59116252 + MIR SINE MIR 110 202 -60 196 303 110 28 chr2 191571691 191571800 -59116054 + L2 LINE L2 2172 2289 -1025 253 307 186 42 chr2 191572169 191572433 -59115421 + MLT1K LTR MaLR 281 582 -6 364 374 69 47 chr2 191572448 191572854 -59115000 + L2 LINE L2 2560 2974 -340 247 312 54 21 chr2 191573042 191573135 -59114719 + L2 LINE L2 3177 3272 0 287 344 25 12 chr2 191574094 191574254 -59113600 - L1ME3A LINE L1 -8 6162 6001 301 294 137 7 chr2 191574370 191574516 -59113338 - L1ME3A LINE L1 -219 5951 5787 519 304 63 1 chr2 191574520 191574741 -59113113 - L1ME3A LINE L1 -468 5702 5469 867 262 129 35 chr2 191574875 191575302 -59112552 + MLT1C LTR MaLR 1 467 0 1615 148 0 44 chr2 191575492 191575762 -59112092 + MER1B DNA MER1_type 82 339 0 419 217 0 0 chr2 191575765 191575834 -59112020 - MLT1D LTR MaLR -436 69 1 1887 123 18 4 chr2 191576312 191576589 -59111265 + AluSx SINE Alu 1 281 -31 22 94 0 0 chr2 191577361 191577425 -59110429 + AT_rich Low_complexity Low_complexity 1 64 0 251 54 27 0 chr2 191577437 191577474 -59110380 + (TTA)n Simple_repeat Simple_repeat 3 40 0 7542 26 0 0 chr2 191577474 191578429 -59109425 - L1PA3 LINE L1 -18 6137 5181 3491 176 33 11 chr2 191578617 191579352 -59108502 - L1MC2 LINE L1 -9 6335 5585 21 0 0 0 chr2 191579565 191579586 -59108268 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 191580486 191580525 -59107329 + AT_rich Low_complexity Low_complexity 1 39 0 282 296 0 12 chr2 191581528 191581609 -59106245 - LTR33A LTR ERVL 0 523 444 29 0 0 0 chr2 191583404 191583433 -59104421 + AT_rich Low_complexity Low_complexity 1 29 0 619 209 48 111 chr2 191583661 191583857 -59103997 - L1MC2 LINE L1 -2055 4091 3921 1124 48 20 0 chr2 191583857 191584004 -59103850 - L1MA2 LINE L1 0 6304 6155 619 209 48 111 chr2 191584004 191584123 -59103731 - L1MC2 LINE L1 -2225 3921 3796 599 206 137 58 chr2 191584253 191584612 -59103242 - L1MC2 LINE L1 -2990 3156 2770 603 98 22 0 chr2 191584630 191584722 -59103132 - AluY SINE Alu 0 311 218 384 271 57 0 chr2 191584754 191584876 -59102978 - L1MC2 LINE L1 -3392 2754 2626 532 279 113 22 chr2 191585023 191585245 -59102609 - MIR SINE MIR -3 259 18 300 266 37 46 chr2 191585380 191585489 -59102365 - MER58 DNA MER1_type -107 108 1 1378 194 8 4 chr2 191586007 191586260 -59101594 + AluJo SINE Alu 3 256 -56 315 0 0 0 chr2 191586580 191586615 -59101239 + (CA)n Simple_repeat Simple_repeat 2 36 0 200 261 43 0 chr2 191586615 191586647 -59101207 + (TA)n Simple_repeat Simple_repeat 2 31 -66 1869 204 14 6 chr2 191586647 191587009 -59100845 - MLT1A1 LTR MaLR 0 365 1 200 261 43 0 chr2 191587009 191587068 -59100786 + (TA)n Simple_repeat Simple_repeat 31 97 0 2300 54 11 0 chr2 191587184 191587504 -59100350 + AluY SINE Alu 2 324 0 1788 154 3 57 chr2 191587504 191587822 -59100032 + AluSx SINE Alu 3 303 -9 22 35 0 0 chr2 191588062 191588091 -59099763 + AT_rich Low_complexity Low_complexity 1 29 0 1936 137 0 14 chr2 191589247 191589554 -59098300 - AluSg SINE Alu 0 303 1 24 32 0 0 chr2 191589871 191589902 -59097952 + AT_rich Low_complexity Low_complexity 1 31 0 308 323 51 9 chr2 191590051 191590268 -59097586 - L1M4 LINE L1 -3319 2827 2602 332 279 29 39 chr2 191591507 191591611 -59096243 - MER94 DNA DNA -8 126 24 23 0 0 0 chr2 191592824 191592847 -59095007 + AT_rich Low_complexity Low_complexity 1 23 0 201 176 0 0 chr2 191592847 191592881 -59094973 + (TA)n Simple_repeat Simple_repeat 1 34 0 2069 167 17 0 chr2 191593687 191594047 -59093807 - MER47A DNA MER2_type 0 366 1 265 133 0 0 chr2 191594372 191594417 -59093437 - L2 LINE L2 0 3313 3269 1667 57 0 19 chr2 191594608 191594820 -59093034 + AluY SINE Alu 89 296 -15 1974 128 27 66 chr2 191594895 191594964 -59092890 - THE1B LTR MaLR 0 428 358 420 20 0 0 chr2 191594964 191595013 -59092841 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1974 128 27 66 chr2 191595013 191595373 -59092481 - THE1B LTR MaLR -70 358 1 259 190 0 0 chr2 191595769 191595827 -59092027 + Tigger3(Golem) DNA MER2_type 2760 2817 -212 254 306 52 52 chr2 191596532 191596666 -59091188 + MER5A DNA MER1_type 56 189 0 213 159 23 0 chr2 191596813 191596857 -59090997 + (TA)n Simple_repeat Simple_repeat 1 45 0 861 225 44 22 chr2 191597500 191597727 -59090127 - MER46A DNA MER2_type -3 233 2 6376 150 47 29 chr2 191597845 191598727 -59089127 + Tigger3b DNA MER2_type 4 915 -2113 1764 154 128 13 chr2 191598727 191599110 -59088744 + MSTA LTR MaLR 2 428 0 6376 150 47 29 chr2 191599110 191599433 -59088421 + Tigger3b DNA MER2_type 915 1231 0 294 132 0 0 chr2 191599483 191599536 -59088318 + (TC)n Simple_repeat Simple_repeat 1 53 0 288 0 0 0 chr2 191600979 191601011 -59086843 + (TTCC)n Simple_repeat Simple_repeat 1 32 0 1246 67 11 6 chr2 191601011 191601189 -59086665 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 272 100 0 20 chr2 191601474 191601524 -59086330 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 332 153 18 27 chr2 191601535 191601646 -59086208 + CT-rich Low_complexity Low_complexity 2 111 0 198 0 0 0 chr2 191603301 191603323 -59084531 + (TA)n Simple_repeat Simple_repeat 1 22 0 211 347 14 0 chr2 191604504 191604576 -59083278 - L2 LINE L2 0 3272 3200 422 202 71 34 chr2 191604770 191604931 -59082923 - L1ME2 LINE L1 -9 6155 6049 216 214 0 0 chr2 191605171 191605213 -59082641 + (TAA)n Simple_repeat Simple_repeat 3 44 0 214 367 113 45 chr2 191605437 191606425 -59081429 - L2 LINE L2 -716 2598 1543 3624 173 50 12 chr2 191607761 191608489 -59079365 + L1MB3 LINE L1 5325 6079 -104 2365 154 3 0 chr2 191608605 191608995 -59078859 - L1MB2 LINE L1 -305 5866 5476 1660 191 17 11 chr2 191609002 191609357 -59078497 - L1PB4 LINE L1 -6 6853 6497 276 77 0 0 chr2 191609361 191609400 -59078454 + (TG)n Simple_repeat Simple_repeat 2 40 0 200 143 29 0 chr2 191609412 191609447 -59078407 + (TA)n Simple_repeat Simple_repeat 2 37 0 4274 185 20 17 chr2 191609516 191610942 -59076912 - L1PB4 LINE L1 -377 6482 5055 621 198 0 0 chr2 191610942 191611048 -59076806 - U6 snRNA snRNA -1 106 1 4274 185 20 17 chr2 191611048 191611102 -59076752 - L1PB4 LINE L1 -1804 5055 5003 1603 260 24 14 chr2 191611098 191611928 -59075926 - L1PB4 LINE L1 -3503 3346 2505 * 321 284 23 0 chr2 191611929 191612017 -59075837 - L1MC4 LINE L1 -1339 6703 6614 879 263 47 5 chr2 191612019 191612404 -59075450 - L1PB4 LINE L1 -5276 1574 1203 928 210 6 6 chr2 191612413 191612594 -59075260 - L1PB4 LINE L1 -6668 181 1 4549 211 59 3 chr2 191612621 191613868 -59073986 - L1M3 LINE L1 -743 6105 4903 4182 153 42 30 chr2 191613869 191614671 -59073183 - L1PA15 LINE L1 -23 6142 5331 3042 229 47 14 chr2 191614834 191615743 -59072111 - L1M3 LINE L1 -2116 4732 3794 1215 196 4 4 chr2 191615767 191615997 -59071857 - AluJo SINE Alu 0 312 83 459 152 22 228 chr2 191615997 191616273 -59071581 - L1M3 LINE L1 -3112 3736 3518 8102 180 27 41 chr2 191616275 191617916 -59069938 - L1MA4 LINE L1 -298 7421 5822 198 0 0 0 chr2 191617916 191617938 -59069916 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 8102 180 27 41 chr2 191617938 191618717 -59069137 - L1MA4 LINE L1 -1897 5822 5033 862 231 57 60 chr2 191618711 191618992 -59068862 - L1MA4 LINE L1 -7274 291 12 * 406 234 24 40 chr2 191618991 191619115 -59068739 - L1M3 LINE L1 -4325 2524 2403 * 9804 80 25 0 chr2 191619115 191620429 -59067425 - HERVL-A2 LTR ERVL -4307 1347 1 3141 88 13 43 chr2 191620429 191620498 -59067356 - MLT2A2 LTR ERVL 0 453 383 2251 108 0 7 chr2 191620498 191620804 -59067050 + AluSx SINE Alu 1 304 -8 3141 88 13 43 chr2 191620804 191621201 -59066653 - MLT2A2 LTR ERVL -70 383 1 210 150 75 0 chr2 191621208 191621248 -59066606 + MIR SINE MIR 124 166 -96 22 0 0 0 chr2 191621759 191621781 -59066073 + AT_rich Low_complexity Low_complexity 1 22 0 5952 31 7 0 chr2 191623014 191623746 -59064108 - L1PA3 LINE L1 0 6155 5419 231 299 30 0 chr2 191624890 191624957 -59062897 + LTR33 LTR ERVL 109 177 -344 306 259 36 45 chr2 191626182 191626294 -59061560 + ERVL LTR ERVL 1272 1382 -4382 1763 326 75 30 chr2 191626374 191627404 -59060450 + ERVL LTR ERVL 1492 2567 -3197 27 29 0 0 chr2 191628121 191628155 -59059699 + AT_rich Low_complexity Low_complexity 1 34 0 211 317 207 0 chr2 191628596 191628678 -59059176 + MIR SINE MIR 20 118 -144 3565 152 64 35 chr2 191628684 191629373 -59058481 - L1PA16 LINE L1 0 6166 5458 1345 141 5 12 chr2 191629373 191629698 -59058156 + L1P4 LINE L1 5178 5492 -659 440 344 62 12 chr2 191629865 191630121 -59057733 + L1MEc LINE L1 37 305 -6091 254 73 24 0 chr2 191630768 191630809 -59057045 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 450 254 52 15 chr2 191630818 191630952 -59056902 + MIR SINE MIR 3 141 -121 2042 51 0 4 chr2 191631143 191631399 -59056455 - AluY SINE Alu -10 301 47 22 88 0 0 chr2 191631433 191631490 -59056364 + AT_rich Low_complexity Low_complexity 1 57 0 2046 140 42 22 chr2 191631549 191631906 -59055948 - THE1B LTR MaLR 0 364 1 192 393 211 27 chr2 191633915 191634213 -59053641 + L2 LINE L2 2920 3272 0 27 29 0 0 chr2 191634837 191634871 -59052983 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr2 191636251 191636273 -59051581 + AT_rich Low_complexity Low_complexity 1 22 0 2381 55 3 3 chr2 191636512 191636823 -59051031 + L1PA5 LINE L1 5843 6153 -1 216 0 0 0 chr2 191638104 191638128 -59049726 + (CA)n Simple_repeat Simple_repeat 1 24 0 387 41 0 0 chr2 191638294 191638343 -59049511 + (TG)n Simple_repeat Simple_repeat 2 50 0 29 0 0 0 chr2 191639184 191639213 -59048641 + AT_rich Low_complexity Low_complexity 1 29 0 362 234 24 127 chr2 191641150 191641355 -59046499 + L2 LINE L2 3130 3313 0 291 335 61 35 chr2 191641632 191641763 -59046091 - L2 LINE L2 -56 3257 3116 2319 131 77 17 chr2 191641763 191642167 -59045687 - MSTA LTR MaLR 0 428 1 291 335 61 35 chr2 191642167 191642265 -59045589 - L2 LINE L2 -197 3116 3022 2840 86 0 0 chr2 191642424 191642786 -59045068 + THE1B LTR MaLR 3 364 0 222 259 0 0 chr2 191642952 191643006 -59044848 + GA-rich Low_complexity Low_complexity 1 54 0 665 327 18 14 chr2 191644133 191644356 -59043498 + MIR SINE MIR 39 262 0 455 318 62 19 chr2 191644733 191644944 -59042910 + MIR SINE MIR 31 250 -12 25 51 0 0 chr2 191645674 191645713 -59042141 + AT_rich Low_complexity Low_complexity 1 39 0 185 0 40 0 chr2 191646614 191646639 -59041215 + (TA)n Simple_repeat Simple_repeat 2 27 0 31 58 0 0 chr2 191646904 191646956 -59040898 + AT_rich Low_complexity Low_complexity 1 52 0 1891 129 0 0 chr2 191647131 191647403 -59040451 + AluJb SINE Alu 26 297 -15 1205 107 0 74 chr2 191648007 191648222 -59039632 + AluSq SINE Alu 4 202 -111 25 75 0 0 chr2 191648410 191648463 -59039391 + AT_rich Low_complexity Low_complexity 1 53 0 1891 129 0 0 chr2 191648638 191648910 -59038944 + AluJb SINE Alu 26 297 -15 1409 106 0 68 chr2 191649517 191649752 -59038102 + AluSq SINE Alu 4 222 -91 536 204 8 23 chr2 191649865 191649997 -59037857 + AluSg/x SINE Alu 170 299 -11 383 82 0 16 chr2 191650007 191650068 -59037786 + (GGGGA)n Simple_repeat Simple_repeat 1 60 0 22 0 0 0 chr2 191650466 191650488 -59037366 + AT_rich Low_complexity Low_complexity 1 22 0 45 45 0 0 chr2 191650631 191650697 -59037157 + AT_rich Low_complexity Low_complexity 1 66 0 435 381 80 21 chr2 191650983 191651998 -59035856 - L2 LINE L2 -181 3091 1992 183 80 0 0 chr2 191652088 191652113 -59035741 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 540 98 68 0 chr2 191652351 191652484 -59035370 + (TA)n Simple_repeat Simple_repeat 2 143 0 358 285 70 69 chr2 191652809 191653019 -59034835 + MIR SINE MIR 54 260 -2 257 404 61 5 chr2 191653123 191653321 -59034533 - MIR SINE MIR -48 214 6 1324 180 37 63 chr2 191653588 191653888 -59033966 + AluJo SINE Alu 1 292 -20 784 163 24 120 chr2 191655736 191655945 -59031909 + MER5A DNA MER1_type 1 189 0 1676 246 24 12 chr2 191655957 191656456 -59031398 - Charlie4a DNA MER1_type -3 505 1 246 221 78 13 chr2 191657541 191657618 -59030236 - L2 LINE L2 -12 3301 3220 2182 97 3 13 chr2 191658648 191658993 -59028861 - AluSc SINE Alu 0 342 1 1266 370 38 27 chr2 191659026 191659686 -59028168 - MER115 DNA AcHobo 0 693 27 1026 171 24 49 chr2 191659957 191660159 -59027695 - L1 LINE L1 -1457 4689 4493 2279 69 7 3 chr2 191660159 191660463 -59027391 - AluY SINE Alu -6 305 1 1026 171 24 49 chr2 191660463 191660506 -59027348 - L1 LINE L1 -1653 4493 4450 1071 206 14 65 chr2 191660758 191661034 -59026820 - MLT1A1 LTR MaLR 0 365 104 717 231 26 0 chr2 191661036 191661192 -59026662 - AluJb SINE Alu -10 302 143 643 112 0 31 chr2 191661196 191661294 -59026560 - MSTC LTR MaLR -333 95 1 4254 226 40 10 chr2 191661366 191662264 -59025590 - ERVL-B1 LTR ERVL -4839 925 1 292 133 0 67 chr2 191662265 191662309 -59025545 - MLT2B1 LTR ERVL -1 514 473 240 35 0 0 chr2 191662309 191662338 -59025516 + (TG)n Simple_repeat Simple_repeat 2 30 0 292 133 0 67 chr2 191662338 191662353 -59025501 - MLT2B1 LTR ERVL -42 473 459 2620 208 0 20 chr2 191662369 191662808 -59025046 - MLT2B1 LTR ERVL -40 480 50 1306 221 141 3 chr2 191662808 191663156 -59024698 + MSTD LTR MaLR 1 396 0 2620 208 0 20 chr2 191663156 191663206 -59024648 - MLT2B1 LTR ERVL -470 50 1 891 249 19 53 chr2 191663217 191663482 -59024372 + MLT1A2 LTR MaLR 119 374 0 4852 131 13 32 chr2 191664046 191664503 -59023351 + L1PA16 LINE L1 5353 5817 -349 1861 146 126 28 chr2 191664503 191664893 -59022961 + MSTA LTR MaLR 1 428 0 8496 166 17 39 chr2 191664895 191666509 -59021345 + MSTA-int LTR MaLR 3 1580 0 1770 152 124 38 chr2 191666509 191666903 -59020951 + MSTA LTR MaLR 1 428 0 4852 131 13 32 chr2 191666903 191667271 -59020583 + L1PA16 LINE L1 5816 6166 0 180 343 82 0 chr2 191667388 191667461 -59020393 + L2 LINE L2 1720 1798 -1516 418 300 103 38 chr2 191667464 191668531 -59019323 - L1M4 LINE L1 -1334 4812 3662 185 94 31 0 chr2 191668677 191668709 -59019145 + A-rich Low_complexity Low_complexity 3 35 0 21 0 0 0 chr2 191670072 191670093 -59017761 + AT_rich Low_complexity Low_complexity 1 21 0 915 243 110 3 chr2 191670789 191671126 -59016728 + LTR37A LTR ERV1 36 408 -18 4917 146 31 41 chr2 191671126 191672296 -59015558 + L1PB4 LINE L1 4990 6153 -3 558 228 21 42 chr2 191674068 191674257 -59013597 - Charlie1 DNA MER1_type -17 2744 2560 252 251 25 152 chr2 191674721 191674964 -59012890 + MER31-int LTR ERV1 2671 2882 -2054 1922 98 4 0 chr2 191674973 191675229 -59012625 + AluSx SINE Alu 1 257 -55 265 98 20 20 chr2 191675393 191675444 -59012410 + MER31-int LTR ERV1 3078 3128 -1808 1007 154 20 62 chr2 191675481 191675676 -59012178 - MER1B DNA MER1_type 0 339 153 * 1105 181 230 5 chr2 191675673 191676120 -59011734 - MER52A LTR ERV1 -1153 602 1 1482 260 32 72 chr2 191676746 191677516 -59010338 + MER31-int LTR ERV1 3388 4027 -909 990 236 61 14 chr2 191677538 191677834 -59010020 + L1MD3 LINE L1 3360 3669 -2477 654 165 0 0 chr2 191677838 191677941 -59009913 + AluSq/x SINE Alu 27 129 -184 191 57 19 57 chr2 191677943 191677996 -59009858 + (TA)n Simple_repeat Simple_repeat 1 51 0 2204 226 145 11 chr2 191678007 191678135 -59009719 + L1MD3 LINE L1 4660 4770 -1376 270 0 0 0 chr2 191678135 191678165 -59009689 + (TA)n Simple_repeat Simple_repeat 2 31 0 2204 226 145 11 chr2 191678165 191678621 -59009233 + L1MD3 LINE L1 4770 4884 -1262 210 91 0 0 chr2 191678621 191678654 -59009200 + (TA)n Simple_repeat Simple_repeat 2 34 0 2204 226 145 11 chr2 191678654 191679253 -59008601 + L1MD3 LINE L1 4884 5402 -744 1575 229 60 46 chr2 191678924 191679443 -59008411 + L1MB8 LINE L1 5652 6177 -1 * 869 182 25 10 chr2 191679746 191679944 -59007910 + LTR37A LTR ERV1 224 424 -2 808 233 88 5 chr2 191682863 191683056 -59004798 - MER63A DNA MER1_type 0 210 2 197 65 32 0 chr2 191683848 191683879 -59003975 + (CAG)n Simple_repeat Simple_repeat 1 32 0 244 361 151 8 chr2 191683886 191684005 -59003849 - L2 LINE L2 -21 3251 3116 258 32 0 0 chr2 191684633 191684664 -59003190 + (CA)n Simple_repeat Simple_repeat 2 32 0 180 24 48 71 chr2 191687563 191687605 -59000249 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 2528 43 0 0 chr2 191688010 191688311 -58999543 + AluY SINE Alu 1 301 -10 22 35 0 0 chr2 191689412 191689441 -58998413 + AT_rich Low_complexity Low_complexity 1 29 0 1269 224 134 9 chr2 191691282 191691626 -58996228 - MER69 DNA AcHobo -809 417 31 542 206 42 112 chr2 191692083 191692311 -58995543 - MIR SINE MIR -29 233 10 8472 78 4 3 chr2 191692678 191694584 -58993270 + L1PA8 LINE L1 4160 6067 -105 592 0 0 0 chr2 191694580 191694648 -58993206 - L1PA3 LINE L1 -166 5989 5922 * 1459 12 0 0 chr2 191694648 191694813 -58993041 + L1PA3 LINE L1 5987 6153 -2 800 85 0 0 chr2 191694845 191694951 -58992903 + L1PA7 LINE L1 6041 6146 -8 737 88 0 0 chr2 191694855 191694957 -58992897 + L1PA7 LINE L1 6051 6152 -2 1435 210 0 25 chr2 191695093 191695379 -58992475 + AluJo SINE Alu 19 297 -15 903 305 99 30 chr2 191695532 191695998 -58991856 + LTR33 LTR ERVL 23 520 -1 243 58 58 29 chr2 191696908 191696977 -58990877 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 208 357 0 24 chr2 191697210 191697294 -58990560 - MIR3 SINE MIR -28 180 99 369 276 24 39 chr2 191698662 191698789 -58989065 - MIR SINE MIR -56 206 82 25 0 0 0 chr2 191699909 191699934 -58987920 + AT_rich Low_complexity Low_complexity 1 25 0 2396 117 25 115 chr2 191702708 191702968 -58984886 + L1MA5A LINE L1 5793 5980 -317 2826 3 0 0 chr2 191702968 191703276 -58984578 + AluYb8 SINE Alu 1 308 -10 2396 117 25 115 chr2 191703276 191703564 -58984290 + L1MA5A LINE L1 5980 6292 -5 23 68 0 0 chr2 191703617 191703661 -58984193 + AT_rich Low_complexity Low_complexity 1 44 0 387 0 0 0 chr2 191703927 191703970 -58983884 + (CA)n Simple_repeat Simple_repeat 1 43 0 22 35 0 0 chr2 191704829 191704858 -58982996 + AT_rich Low_complexity Low_complexity 1 29 0 544 350 30 10 chr2 191705045 191705248 -58982606 + MIR SINE MIR 56 262 0 412 286 60 22 chr2 191706626 191706811 -58981043 - L2 LINE L2 -47 3266 3075 2159 72 7 7 chr2 191707982 191708261 -58979593 + AluY SINE Alu 16 294 -17 861 66 0 0 chr2 191708635 191708741 -58979113 + AluSg/x SINE Alu 176 281 -31 200 278 0 19 chr2 191709423 191709477 -58978377 + CT-rich Low_complexity Low_complexity 2 54 0 200 287 58 23 chr2 191709990 191710077 -58977777 - MIR3 SINE MIR -34 174 85 400 318 9 0 chr2 191710131 191710238 -58977616 - L2 LINE L2 -5 3308 3201 440 313 44 26 chr2 191710649 191710876 -58976978 - MIR SINE MIR 0 262 32 1706 163 0 24 chr2 191710885 191711201 -58976653 + AluJo SINE Alu 1 309 0 2826 3 0 0 chr2 191711997 191712305 -58975549 + AluYb8 SINE Alu 1 308 -10 27 29 0 0 chr2 191712614 191712648 -58975206 + AT_rich Low_complexity Low_complexity 1 34 0 210 359 0 33 chr2 191713104 191713196 -58974658 - L3 LINE CR1 -7 1570 1482 21 0 0 0 chr2 191713247 191713268 -58974586 + AT_rich Low_complexity Low_complexity 1 21 0 223 250 44 0 chr2 191713654 191713722 -58974132 - L3 LINE CR1 -715 862 792 291 351 115 55 chr2 191714103 191714556 -58973298 - L2 LINE L2 -516 2798 2319 536 296 50 12 chr2 191714558 191714879 -58972975 + L1ME4a LINE L1 5583 5915 -206 646 174 6 23 chr2 191714998 191715170 -58972684 + GA-rich Low_complexity Low_complexity 1 169 0 33 0 0 0 chr2 191716261 191716294 -58971560 + AT_rich Low_complexity Low_complexity 1 33 0 631 330 96 4 chr2 191716678 191716917 -58970937 - MIR SINE MIR 0 262 2 41 72 0 0 chr2 191717958 191718041 -58969813 + AT_rich Low_complexity Low_complexity 1 83 0 2242 88 3 0 chr2 191718466 191718760 -58969094 - AluSc SINE Alu -14 295 1 355 283 72 7 chr2 191719220 191719372 -58968482 + MER103 DNA DNA 3 164 -2 263 317 49 0 chr2 191719604 191719686 -58968168 + L2 LINE L2 3171 3256 -16 701 250 109 0 chr2 191720408 191720592 -58967262 + MER63A DNA MER1_type 1 204 -6 1268 145 10 0 chr2 191722768 191722968 -58964886 - AluJb SINE Alu -22 290 89 23 33 0 0 chr2 191723083 191723113 -58964741 + AT_rich Low_complexity Low_complexity 1 30 0 2147 129 39 20 chr2 191723715 191724072 -58963782 + THE1B LTR MaLR 1 364 0 25 51 0 0 chr2 191724602 191724641 -58963213 + AT_rich Low_complexity Low_complexity 1 39 0 25 65 0 0 chr2 191725713 191725759 -58962095 + AT_rich Low_complexity Low_complexity 1 46 0 223 366 56 0 chr2 191725881 191725952 -58961902 + L2 LINE L2 3196 3270 -2 2035 131 0 19 chr2 191726067 191726379 -58961475 - AluSx SINE Alu -6 306 1 21 0 0 0 chr2 191726613 191726634 -58961220 + AT_rich Low_complexity Low_complexity 1 21 0 715 255 19 0 chr2 191729713 191729874 -58957980 - FRAM SINE Alu -2 164 1 354 339 11 32 chr2 191730136 191730322 -58957532 + MER5A DNA MER1_type 6 187 -2 218 301 14 14 chr2 191730515 191730588 -58957266 + L2 LINE L2 3146 3218 -95 448 364 11 6 chr2 191730720 191730896 -58956958 - MER5B DNA MER1_type -1 177 1 1591 230 127 42 chr2 191730914 191731489 -58956365 + MLT1E2 LTR MaLR 1 624 -2 227 282 39 39 chr2 191731638 191731716 -58956138 + MIR SINE MIR 68 145 -63 238 302 31 10 chr2 191731820 191731916 -58955938 + MIR SINE MIR 102 199 -63 230 350 30 10 chr2 191732140 191732240 -58955614 - MIR SINE MIR -104 104 2 288 0 0 0 chr2 191733028 191733060 -58954794 + (TTG)n Simple_repeat Simple_repeat 2 33 0 22 35 0 0 chr2 191733184 191733213 -58954641 + AT_rich Low_complexity Low_complexity 1 29 0 193 331 223 0 chr2 191733971 191734119 -58953735 + MIR SINE MIR 36 216 -46 1570 158 22 4 chr2 191734550 191734828 -58953026 - L1PB4 LINE L1 -1 6155 5873 365 355 81 37 chr2 191735580 191735988 -58951866 + MLT1K LTR MaLR 108 533 -55 229 232 89 0 chr2 191736084 191736140 -58951714 + MIR SINE MIR 91 151 -57 3703 204 31 26 chr2 191736399 191736691 -58951163 + L1MB7 LINE L1 5033 5322 -862 2923 142 50 2 chr2 191736691 191737228 -58950626 + L1MA5 LINE L1 5725 6287 -13 3703 204 31 26 chr2 191737228 191738005 -58949849 + L1MB7 LINE L1 5322 6114 -70 571 193 17 8 chr2 191738005 191738124 -58949730 - L1PA16 LINE L1 -3 6163 6044 3703 204 31 26 chr2 191738124 191738196 -58949658 + L1MB7 LINE L1 6114 6184 0 21 36 0 0 chr2 191738535 191738563 -58949291 + AT_rich Low_complexity Low_complexity 1 28 0 567 122 0 0 chr2 191738943 191739033 -58948821 + (GGAA)n Simple_repeat Simple_repeat 3 92 0 23 54 0 0 chr2 191739064 191739101 -58948753 + AT_rich Low_complexity Low_complexity 1 37 0 258 314 105 20 chr2 191739194 191739347 -58948507 - L2 LINE L2 0 3313 3148 189 121 0 0 chr2 191739415 191739448 -58948406 + (TG)n Simple_repeat Simple_repeat 1 33 0 417 283 46 40 chr2 191739634 191739807 -58948047 + MER117 DNA MER1_type 18 191 -6 804 242 112 29 chr2 191739890 191740167 -58947687 + MLT1A2 LTR MaLR 59 358 -16 21 0 0 0 chr2 191741502 191741523 -58946331 + AT_rich Low_complexity Low_complexity 1 21 0 315 335 80 36 chr2 191741962 191742186 -58945668 + MIR SINE MIR 22 255 -7 326 134 15 0 chr2 191742933 191743000 -58944854 + (TG)n Simple_repeat Simple_repeat 1 68 0 252 145 65 0 chr2 191743135 191743197 -58944657 + (CAAAC)n Simple_repeat Simple_repeat 4 69 0 182 103 0 26 chr2 191743731 191743770 -58944084 + (CAGAGA)n Simple_repeat Simple_repeat 3 40 0 206 259 141 22 chr2 191744106 191744241 -58943613 + L2 LINE L2 3163 3313 0 263 241 35 103 chr2 191744963 191745108 -58942746 + MIR3 SINE MIR 67 201 -7 21 57 0 0 chr2 191745731 191745766 -58942088 + AT_rich Low_complexity Low_complexity 1 35 0 609 338 68 62 chr2 191746554 191746894 -58940960 - L2 LINE L2 0 3272 2931 275 345 90 45 chr2 191747092 191747646 -58940208 - L2 LINE L2 -1481 1833 1255 2135 52 63 0 chr2 191748741 191749011 -58938843 + AluY SINE Alu 21 307 -4 332 314 52 29 chr2 191749370 191749542 -58938312 + MIR3 SINE MIR 24 199 -9 427 278 44 33 chr2 191750921 191751101 -58936753 + MIR SINE MIR 81 262 0 21 57 0 0 chr2 191751185 191751220 -58936634 + AT_rich Low_complexity Low_complexity 1 35 0 25 51 0 0 chr2 191751368 191751407 -58936447 + AT_rich Low_complexity Low_complexity 1 39 0 31 0 0 0 chr2 191751876 191751907 -58935947 + AT_rich Low_complexity Low_complexity 1 31 0 647 199 46 31 chr2 191753056 191753252 -58934602 + L1MA8 LINE L1 6092 6290 -1 226 50 50 0 chr2 191754262 191754302 -58933552 + (CAAA)n Simple_repeat Simple_repeat 4 45 0 23 54 0 0 chr2 191754766 191754803 -58933051 + AT_rich Low_complexity Low_complexity 1 37 0 2091 88 6 64 chr2 191755851 191756179 -58931675 - AluSc SINE Alu 0 309 1 1325 209 79 27 chr2 191756184 191756552 -58931302 + MLT1B LTR MaLR 4 390 0 23 68 0 0 chr2 191757459 191757503 -58930351 + AT_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr2 191761959 191761988 -58925866 + AT_rich Low_complexity Low_complexity 1 29 0 873 209 46 39 chr2 191762815 191763098 -58924756 - Charlie2 DNA MER1_type -114 2748 2464 235 237 34 59 chr2 191763337 191763455 -58924399 - Charlie2 DNA MER1_type -409 2453 2339 401 335 59 0 chr2 191763697 191763849 -58924005 - MIR SINE MIR -80 182 22 679 238 3 121 chr2 191763980 191764295 -58923559 - Charlie2 DNA MER1_type -2444 338 61 2415 70 0 0 chr2 191765618 191765916 -58921938 + AluY SINE Alu 1 298 -13 30 45 0 0 chr2 191765949 191765993 -58921861 + AT_rich Low_complexity Low_complexity 1 44 0 343 352 40 28 chr2 191766388 191766564 -58921290 - MIR3 SINE MIR -15 193 16 997 296 78 27 chr2 191768692 191769142 -58918712 - L2 LINE L2 -35 3278 2806 1789 185 26 3 chr2 191769750 191770090 -58917764 + MER7A DNA MER2_type 1 346 0 1469 254 93 16 chr2 191771392 191771909 -58915945 + L1ME3A LINE L1 5391 5947 -223 2285 132 39 68 chr2 191772100 191772539 -58915315 - MSTB LTR MaLR 0 426 1 339 65 0 0 chr2 191772856 191772902 -58914952 + (TG)n Simple_repeat Simple_repeat 2 47 0 213 256 13 13 chr2 191773824 191773902 -58913952 + T-rich Low_complexity Low_complexity 2 79 0 1197 86 0 0 chr2 191774267 191774419 -58913435 + AluY SINE Alu 1 152 -159 377 259 34 169 chr2 191776051 191776207 -58911647 - L2 LINE L2 0 3313 3137 1576 137 117 4 chr2 191776207 191776463 -58911391 + AluSx SINE Alu 1 285 -27 377 259 34 169 chr2 191776463 191776493 -58911361 - L2 LINE L2 -176 3137 3105 218 56 28 0 chr2 191776493 191776529 -58911325 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 377 259 34 169 chr2 191776529 191776754 -58911100 - L2 LINE L2 -208 3105 2957 23 68 0 0 chr2 191777051 191777095 -58910759 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr2 191777765 191777793 -58910061 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 191777889 191777917 -58909937 + AT_rich Low_complexity Low_complexity 1 28 0 22 80 0 0 chr2 191778266 191778316 -58909538 + AT_rich Low_complexity Low_complexity 1 50 0 363 96 0 0 chr2 191779077 191779129 -58908725 + (TA)n Simple_repeat Simple_repeat 1 52 0 283 303 0 0 chr2 191779130 191779229 -58908625 + L1MC4 LINE L1 6614 6712 -1330 350 306 58 0 chr2 191780330 191780451 -58907403 - MIR SINE MIR -10 252 125 22 35 0 0 chr2 191781789 191781818 -58906036 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr2 191782704 191782740 -58905114 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 191782879 191782902 -58904952 + AT_rich Low_complexity Low_complexity 1 23 0 360 0 0 0 chr2 191785603 191785643 -58902211 + (TG)n Simple_repeat Simple_repeat 2 41 0 217 177 42 52 chr2 191786060 191786156 -58901698 + (TATAA)n Simple_repeat Simple_repeat 1 95 0 248 296 42 0 chr2 191786345 191786416 -58901438 + MIR3 SINE MIR 98 171 -37 210 71 0 0 chr2 191787044 191787072 -58900782 + (TTCC)n Simple_repeat Simple_repeat 1 28 0 2040 112 7 10 chr2 191787072 191787367 -58900487 - AluSq SINE Alu -17 296 3 243 217 22 0 chr2 191789516 191789562 -58898292 - MER94 DNA DNA 0 134 88 2654 267 17 2 chr2 191790842 191791423 -58896431 + L1M2 LINE L1 1022 1611 -5238 * 5535 171 65 6 chr2 191791420 191792821 -58895033 + L1MA4A LINE L1 4801 6292 -11 195 250 29 15 chr2 191792965 191793033 -58894821 - L2 LINE L2 -492 2822 2754 3870 121 157 78 chr2 191793332 191794199 -58893655 - Tigger3b DNA MER2_type 0 1231 297 1276 184 77 19 chr2 191794209 191794470 -58893384 + AluJo SINE Alu 12 287 -25 1633 174 64 0 chr2 191794479 191794790 -58893064 - Tigger3b DNA MER2_type -898 333 3 23 0 0 0 chr2 191795584 191795607 -58892247 + AT_rich Low_complexity Low_complexity 1 23 0 220 256 64 13 chr2 191795851 191795929 -58891925 - MIR SINE MIR -14 248 167 366 23 0 0 chr2 191796160 191796203 -58891651 + (TG)n Simple_repeat Simple_repeat 2 44 0 225 344 80 33 chr2 191797465 191797616 -58890238 - MIR3 SINE MIR -49 159 2 597 278 122 70 chr2 191797636 191798175 -58889679 - HAL1 LINE L1 -888 1619 1053 3479 130 50 86 chr2 191798461 191799275 -58888579 + LTR1 LTR ERV1 1 785 0 495 317 141 30 chr2 191799276 191799715 -58888139 - L1M4 LINE L1 -1827 4319 3832 1193 155 52 13 chr2 191799733 191799965 -58887889 + MER96B DNA MER1_type? 177 417 0 448 350 66 33 chr2 191800013 191800407 -58887447 + MLT1K LTR MaLR 142 548 -40 1253 167 155 0 chr2 191802233 191802491 -58885363 + AluJb SINE Alu 5 302 0 279 140 0 0 chr2 191802499 191802549 -58885305 + (A)n Simple_repeat Simple_repeat 1 50 0 237 398 0 0 chr2 191802596 191802699 -58885155 - L2 LINE L2 -800 2514 2412 314 23 0 23 chr2 191805261 191805305 -58882549 + (CA)n Simple_repeat Simple_repeat 2 44 0 200 227 0 0 chr2 191806061 191806105 -58881749 + A-rich Low_complexity Low_complexity 1 44 0 911 248 28 8 chr2 191806491 191806745 -58881109 - L1MA9 LINE L1 -38 6274 6016 236 314 0 0 chr2 191807612 191807682 -58880172 - LTR33 LTR ERVL -346 175 106 246 338 136 25 chr2 191809191 191809514 -58878340 - L1MC/D LINE L1 -1933 5875 5517 461 259 18 30 chr2 191809668 191809736 -58878118 - MER104 DNA Tc2 -1731 167 100 2136 122 0 3 chr2 191809736 191810039 -58877815 + AluSx SINE Alu 1 302 -10 461 259 18 30 chr2 191810039 191810136 -58877718 - MER104 DNA Tc2 -1798 100 4 242 297 99 0 chr2 191810445 191810546 -58877308 + L1ME4a LINE L1 5978 6088 -33 186 313 104 30 chr2 191812076 191812210 -58875644 + L2 LINE L2 3169 3312 -1 346 322 78 41 chr2 191812524 191812769 -58875085 - MIR SINE MIR -3 259 6 1598 193 14 0 chr2 191813350 191813646 -58874208 - AluJb SINE Alu -12 300 1 1914 103 96 0 chr2 191815111 191815393 -58872461 + AluSq SINE Alu 1 309 -4 396 0 0 0 chr2 191816553 191816597 -58871257 + (TA)n Simple_repeat Simple_repeat 2 45 0 596 277 62 27 chr2 191817347 191817571 -58870283 - MIR SINE MIR -25 237 6 27 62 0 0 chr2 191818060 191818108 -58869746 + AT_rich Low_complexity Low_complexity 1 48 0 273 146 0 0 chr2 191818647 191818695 -58869159 + (GGGAA)n Simple_repeat Simple_repeat 3 50 0 193 333 79 8 chr2 191819579 191819705 -58868149 - L3 LINE CR1 -50 1527 1393 187 383 55 16 chr2 191819850 191819978 -58867876 - L3 LINE CR1 -270 1307 1175 191 189 19 0 chr2 191820129 191820182 -58867672 + (TTTG)n Simple_repeat Simple_repeat 3 56 0 24 0 0 0 chr2 191820260 191820284 -58867570 + AT_rich Low_complexity Low_complexity 1 24 0 510 308 140 38 chr2 191820284 191820706 -58867148 - L3 LINE CR1 -589 988 524 22 0 0 0 chr2 191822049 191822071 -58865783 + AT_rich Low_complexity Low_complexity 1 22 0 304 21 62 0 chr2 191823460 191823508 -58864346 + L1MA3 LINE L1 6255 6305 0 24 32 0 0 chr2 191824472 191824503 -58863351 + AT_rich Low_complexity Low_complexity 1 31 0 186 43 0 0 chr2 191825259 191825282 -58862572 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 252 235 0 0 chr2 191826171 191826222 -58861632 + GA-rich Low_complexity Low_complexity 2 52 0 1045 266 70 39 chr2 191827228 191828045 -58859809 - L1MEc LINE L1 -3484 2731 1936 5297 163 20 23 chr2 191828207 191829540 -58858314 - L1PB4 LINE L1 -1 6155 4835 3352 56 0 0 chr2 191829543 191829951 -58857903 + THE1-int LTR MaLR 1139 1546 -34 7710 120 4 0 chr2 191829951 191831049 -58856805 - THE1B-int LTR MaLR -478 1102 1 1156 117 28 108 chr2 191831052 191831301 -58856553 - THE1B LTR MaLR -133 231 3 671 276 31 20 chr2 191831354 191831608 -58856246 - L1MEc LINE L1 -6092 304 48 1951 147 14 0 chr2 191831736 191832029 -58855825 - AluSx SINE Alu -15 297 1 216 159 0 45 chr2 191834481 191834525 -58853329 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 253 337 123 18 chr2 191837201 191837364 -58850490 - MIR SINE MIR 0 262 83 320 361 132 9 chr2 191837895 191838114 -58849740 - L2 LINE L2 -23 3249 3004 225 0 0 0 chr2 191838484 191838509 -58849345 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 290 344 109 10 chr2 191838541 191838733 -58849121 - MIR SINE MIR -24 238 28 25 51 0 0 chr2 191839069 191839108 -58848746 + AT_rich Low_complexity Low_complexity 1 39 0 366 23 0 0 chr2 191840469 191840512 -58847342 + (CA)n Simple_repeat Simple_repeat 2 44 0 192 152 0 0 chr2 191841566 191841599 -58846255 + A-rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr2 191842051 191842074 -58845780 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 191842991 191843012 -58844842 + AT_rich Low_complexity Low_complexity 1 21 0 3103 185 25 2 chr2 191843317 191843913 -58843941 - L1MC2 LINE L1 -1 7763 6142 4692 93 28 3 chr2 191843920 191846823 -58841031 - L1PA7 LINE L1 -1 6153 3130 1392 203 125 16 chr2 191846823 191847128 -58840726 + LTR10B LTR ERV1 1 338 -167 760 281 138 14 chr2 191847146 191847495 -58840359 + LTR10A LTR ERV1 86 477 -132 1926 178 87 37 chr2 191847497 191847958 -58839896 + LTR2B LTR ERV1 7 490 0 18602 110 73 65 chr2 191847958 191852869 -58834985 + Harlequin LTR ERV1 1 5069 -1827 5129 105 3 1 chr2 191852860 191853613 -58834241 + Harlequin LTR ERV1 6135 6888 -8 * 1764 169 87 51 chr2 191853614 191854086 -58833768 + LTR2B LTR ERV1 2 490 0 367 210 25 0 chr2 191854086 191854167 -58833687 + LTR10B LTR ERV1 464 546 -1 14357 118 9 31 chr2 191854168 191857616 -58830238 - L1P3 LINE L1 -3012 3449 1 2504 188 25 33 chr2 191857615 191858220 -58829634 - L1MC3 LINE L1 -597 7188 6589 * 2320 191 86 18 chr2 191858219 191858581 -58829273 - L1MB1 LINE L1 -271 5897 5561 * 2146 116 0 0 chr2 191858581 191858873 -58828981 - AluSg SINE Alu -18 292 1 2320 191 86 18 chr2 191858873 191859346 -58828508 - L1MB1 LINE L1 -607 5561 5019 1517 162 21 77 chr2 191859347 191859608 -58828246 + L1MA10 LINE L1 5930 6204 -130 2134 87 0 34 chr2 191859608 191859947 -58827907 + AluY SINE Alu 1 311 0 1517 162 21 77 chr2 191859947 191860065 -58827789 + L1MA10 LINE L1 6204 6285 -49 305 194 15 0 chr2 191860065 191860132 -58827722 - L1MA10 LINE L1 -12 6322 6255 1517 162 21 77 chr2 191860132 191860178 -58827676 + L1MA10 LINE L1 6285 6332 -2 201 39 0 0 chr2 191860186 191860212 -58827642 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1906 225 19 19 chr2 191860283 191860802 -58827052 - L1MC3 LINE L1 -1323 6462 5944 2269 212 14 18 chr2 191860816 191861382 -58826472 - L1MB8 LINE L1 -83 6095 5532 337 313 50 35 chr2 191861386 191861584 -58826270 + L2 LINE L2 3112 3312 -1 185 326 155 17 chr2 191862134 191862315 -58825539 - MIR SINE MIR -42 220 15 223 203 31 0 chr2 191862418 191862482 -58825372 + CT-rich Low_complexity Low_complexity 2 67 0 484 281 136 40 chr2 191862512 191862549 -58825305 + MIR SINE MIR 12 44 -218 1557 184 127 9 chr2 191862549 191862896 -58824958 + MLT1B LTR MaLR 3 390 0 484 281 136 40 chr2 191862896 191863086 -58824768 + MIR SINE MIR 44 261 -1 264 197 0 28 chr2 191864037 191864108 -58823746 + T-rich Low_complexity Low_complexity 2 70 0 35 41 0 0 chr2 191865016 191865065 -58822789 + AT_rich Low_complexity Low_complexity 1 49 0 21 57 0 0 chr2 191865098 191865133 -58822721 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr2 191865865 191865901 -58821953 + AT_rich Low_complexity Low_complexity 1 36 0 1180 188 69 74 chr2 191866300 191866677 -58821177 - MLT1B LTR MaLR -6 384 10 22 70 0 0 chr2 191868521 191868564 -58819290 + AT_rich Low_complexity Low_complexity 1 43 0 21 71 0 0 chr2 191868798 191868840 -58819014 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 191868921 191868942 -58818912 + AT_rich Low_complexity Low_complexity 1 21 0 310 299 80 36 chr2 191869038 191869262 -58818592 - L1ME4a LINE L1 -16 6105 5872 29366 115 9 56 chr2 191869291 191875749 -58812105 + L1PA7 LINE L1 9 6150 -4 257 322 77 11 chr2 191875783 191876069 -58811785 - L1ME4a LINE L1 -304 5817 5513 246 62 0 0 chr2 191876092 191876124 -58811730 + (TG)n Simple_repeat Simple_repeat 2 33 0 718 171 8 16 chr2 191928213 191928342 -58759512 - Tigger1 DNA MER2_type -2290 128 1 1341 224 74 118 chr2 191928345 191928474 -58759380 - L1ME4a LINE L1 -769 5377 5244 261 0 0 0 chr2 191928474 191928503 -58759351 + (CA)n Simple_repeat Simple_repeat 2 30 0 1341 224 74 118 chr2 191928503 191928832 -58759022 - L1ME4a LINE L1 -902 5244 4902 502 118 0 0 chr2 191928832 191928908 -58758946 - MER41A LTR ERV1 -88 466 391 1341 224 74 118 chr2 191928908 191929358 -58758496 - L1ME4a LINE L1 -1244 4902 4436 842 145 21 0 chr2 191929492 191929637 -58758217 - HERVH LTR ERV1 -4426 3287 3140 * 10682 91 21 9 chr2 191929631 191931209 -58756645 - HERVH LTR ERV1 -4726 2987 1391 239 341 0 0 chr2 191931209 191931341 -58756513 + C-rich Low_complexity Low_complexity 1 132 0 446 167 0 0 chr2 191931454 191931526 -58756328 - AluS SINE Alu -233 80 9 338 64 0 0 chr2 191931526 191931573 -58756281 + MADE1 DNA Mariner 34 80 0 677 192 0 0 chr2 191931771 191931891 -58755963 + FLAM_A SINE Alu 1 120 -13 267 31 0 0 chr2 191931900 191931932 -58755922 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 231 367 0 0 chr2 191932056 191932116 -58755738 + MIR SINE MIR 28 87 -121 46 33 0 0 chr2 191932471 191932531 -58755323 + AT_rich Low_complexity Low_complexity 1 60 0 2143 124 0 7 chr2 191932636 191932943 -58754911 + AluSx SINE Alu 1 305 -7 1946 156 30 8 chr2 191933689 191934055 -58753799 + L1PA16 LINE L1 5793 6166 0 2004 131 14 0 chr2 191935012 191935309 -58752545 + AluSp SINE Alu 1 301 -12 197 360 23 0 chr2 191935329 191935415 -58752439 + L3 LINE CR1 1387 1474 -103 1812 135 14 0 chr2 191935459 191935784 -58752070 - AluSq SINE Alu 0 329 1 9298 91 14 35 chr2 191937490 191938934 -58748920 - HERVH LTR ERV1 -6298 1415 1 3258 73 2 7 chr2 191938936 191939386 -58748468 - LTR7 LTR ERV1 -2 448 1 1178 235 72 44 chr2 191939936 191940395 -58747459 + L1 LINE L1 2551 3022 -3124 35 41 0 0 chr2 191941717 191941766 -58746088 + AT_rich Low_complexity Low_complexity 1 49 0 23 33 0 0 chr2 191941903 191941933 -58745921 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 191942362 191942383 -58745471 + AT_rich Low_complexity Low_complexity 1 21 0 26 104 0 0 chr2 191942566 191942662 -58745192 + AT_rich Low_complexity Low_complexity 1 96 0 257 268 49 82 chr2 191944840 191945023 -58742831 + MIR SINE MIR 84 260 -2 219 176 78 39 chr2 191945026 191945128 -58742726 + (TATATG)n Simple_repeat Simple_repeat 2 107 0 4875 155 33 43 chr2 191945491 191946743 -58741111 - L1MA7 LINE L1 -1 6290 5054 24 32 0 0 chr2 191947710 191947741 -58740113 + AT_rich Low_complexity Low_complexity 1 31 0 22 70 0 0 chr2 191947769 191947812 -58740042 + AT_rich Low_complexity Low_complexity 1 43 0 327 113 32 16 chr2 191948038 191948100 -58739754 + LTR60 LTR ERV1 1 63 -523 931 176 59 36 chr2 191948161 191948383 -58739471 + THE1C LTR MaLR 1 227 -148 216 217 22 0 chr2 191949503 191949549 -58738305 + CT-rich Low_complexity Low_complexity 2 48 0 2090 118 7 0 chr2 191950017 191950321 -58737533 - AluSx SINE Alu -6 306 1 32 75 0 0 chr2 191950647 191950714 -58737140 + AT_rich Low_complexity Low_complexity 1 67 0 23 0 0 0 chr2 191950913 191950936 -58736918 + AT_rich Low_complexity Low_complexity 1 23 0 1996 129 3 68 chr2 191951499 191951879 -58735975 + THE1A LTR MaLR 1 355 0 11575 95 6 2 chr2 191951879 191953454 -58734400 + THE1A-int LTR MaLR 1 1580 0 379 156 100 0 chr2 191953454 191953544 -58734310 + THE1A LTR MaLR 1 99 -276 1069 152 0 91 chr2 191953648 191953878 -58733976 + THE1A LTR MaLR 147 355 0 27 29 0 0 chr2 191954852 191954886 -58732968 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 191955449 191955470 -58732384 + AT_rich Low_complexity Low_complexity 1 21 0 700 273 116 20 chr2 191956210 191956555 -58731299 - L1MC4 LINE L1 -287 7755 7378 940 271 45 75 chr2 191956559 191957043 -58730811 - L1M4 LINE L1 -2045 4101 3633 1623 199 13 3 chr2 191957043 191957345 -58730509 + AluJb SINE Alu 3 307 -5 940 271 45 75 chr2 191957345 191957391 -58730463 - L1M4 LINE L1 -2513 3633 3587 1847 172 0 0 chr2 191958063 191958366 -58729488 + AluSx SINE Alu 9 311 -1 364 300 23 0 chr2 191958451 191958581 -58729273 - L1M4 LINE L1 -2959 3187 3055 6196 104 45 29 chr2 191958593 191959738 -58728116 - SVA Other Other -728 1386 428 341 309 107 52 chr2 191959746 191960131 -58727723 + L1 LINE L1 525 930 -5919 7367 133 28 13 chr2 191960277 191961424 -58726430 + THE1C-int LTR MaLR 417 1580 0 1688 162 72 12 chr2 191961424 191961770 -58726084 + THE1C LTR MaLR 1 367 -8 956 260 41 53 chr2 191961867 191961971 -58725883 + LTR43 LTR ERV1 132 236 -366 2084 118 10 22 chr2 191961971 191962284 -58725570 - AluSq SINE Alu -4 309 1 956 260 41 53 chr2 191962284 191962517 -58725337 + LTR43 LTR ERV1 236 465 -137 297 247 75 21 chr2 191962757 191962850 -58725004 + MIR SINE MIR 71 168 -94 2472 127 8 3 chr2 191962899 191963261 -58724593 + THE1B LTR MaLR 1 364 0 808 298 37 4 chr2 191963435 191963677 -58724177 - MIR SINE MIR -10 252 3 2351 204 69 0 chr2 191963900 191964380 -58723474 - MER6A DNA MER2_type 0 605 93 23 0 0 0 chr2 191964477 191964500 -58723354 + AT_rich Low_complexity Low_complexity 1 23 0 9190 227 27 32 chr2 191965095 191968617 -58719237 + L1 LINE L1 2371 5731 -1117 1904 291 121 55 chr2 191968831 191969633 -58718221 - L2 LINE L2 0 3313 2565 1942 118 36 10 chr2 191969633 191969937 -58717917 + AluSx SINE Alu 1 312 0 1904 291 121 55 chr2 191969937 191970736 -58717118 - L2 LINE L2 -748 2565 1525 182 270 0 0 chr2 191970964 191971001 -58716853 - L2 LINE L2 -4 3268 3232 27 62 0 0 chr2 191971752 191971800 -58716054 + AT_rich Low_complexity Low_complexity 1 48 0 182 200 0 80 chr2 191972237 191972287 -58715567 + L2 LINE L2 3268 3313 0 357 256 32 16 chr2 191972554 191972679 -58715175 - MLT1J LTR MaLR -347 164 38 222 327 18 0 chr2 191972946 191973059 -58714795 + (CATA)n Simple_repeat Simple_repeat 3 117 0 251 269 29 67 chr2 191974554 191974658 -58713196 - MIR SINE MIR -14 248 149 61 27 0 0 chr2 191976677 191976752 -58711102 + AT_rich Low_complexity Low_complexity 1 75 0 1973 262 136 37 chr2 191977342 191978456 -58709398 - L1MC4 LINE L1 0 8042 6819 2169 141 3 34 chr2 191980178 191980560 -58707294 - L1PB1 LINE L1 0 6151 5782 190 214 14 14 chr2 191980560 191980630 -58707224 + (TA)n Simple_repeat Simple_repeat 1 70 0 1122 125 0 17 chr2 191980630 191980806 -58707048 - L1PB1 LINE L1 -360 5791 5619 345 360 130 11 chr2 191980874 191980951 -58706903 + L2 LINE L2 2766 2832 -481 2630 19 3 10 chr2 191980951 191981264 -58706590 - AluYa5 SINE Alu 0 311 1 345 360 130 11 chr2 191981264 191981565 -58706289 + L2 LINE L2 2832 3195 -118 183 290 250 0 chr2 191981710 191981810 -58706044 - L2 LINE L2 -253 3060 2936 1769 179 34 10 chr2 191981838 191982252 -58705602 + L1 LINE L1 3120 3543 -2603 630 153 24 17 chr2 191982352 191982634 -58705220 + G-rich Low_complexity Low_complexity 1 283 0 6687 185 36 13 chr2 191982807 191984290 -58703564 + L1 LINE L1 2827 4343 -1803 362 371 79 30 chr2 191984635 191985091 -58702763 - L1MEd LINE L1 -5366 753 231 408 104 0 0 chr2 191985125 191985192 -58702662 + (CA)n Simple_repeat Simple_repeat 2 68 0 24 53 0 0 chr2 191985261 191985299 -58702555 + AT_rich Low_complexity Low_complexity 1 38 0 2337 98 52 0 chr2 191985987 191986334 -58701520 + L1PA13 LINE L1 5785 6149 -14 181 219 16 16 chr2 191986672 191986736 -58701118 + (TA)n Simple_repeat Simple_repeat 2 65 0 1561 166 4 4 chr2 191987177 191987430 -58700424 - LTR31 LTR ERV1 0 619 367 2089 175 28 0 chr2 191987797 191988151 -58699703 - LTR31 LTR ERV1 -255 364 1 452 303 67 6 chr2 191988286 191988464 -58699390 + MIR SINE MIR 74 262 0 719 224 61 5 chr2 191988811 191989007 -58698847 - MER67C LTR ERV1 -2 708 502 480 311 80 5 chr2 191989006 191989218 -58698636 - MER67C LTR ERV1 -320 390 163 * 942 182 16 0 chr2 191989218 191989405 -58698449 - L1MA8 LINE L1 -1 6290 6101 437 138 46 23 chr2 191989405 191989492 -58698362 + L1 LINE L1 5185 5273 -873 2068 136 7 0 chr2 191990566 191990868 -58696986 + AluSx SINE Alu 1 304 -8 2526 170 30 9 chr2 191991726 191992411 -58695443 - L1P4 LINE L1 -687 5479 4787 2290 86 0 0 chr2 191992424 191992725 -58695129 - AluY SINE Alu -10 301 1 296 250 23 0 chr2 191992812 191992900 -58694954 - MER103 DNA DNA 0 166 77 271 323 108 15 chr2 191993063 191993258 -58694596 + MIR SINE MIR 19 231 -31 26 0 0 0 chr2 191993263 191993289 -58694565 + AT_rich Low_complexity Low_complexity 1 26 0 4804 91 8 6 chr2 191993294 191993965 -58693889 - L1PA10 LINE L1 -14 6154 5483 295 209 0 15 chr2 191993965 191994032 -58693822 + L1P3 LINE L1 554 619 -5256 183 80 0 0 chr2 191994042 191994067 -58693787 + (CACAG)n Simple_repeat Simple_repeat 1 25 0 187 260 52 52 chr2 191994511 191994588 -58693266 + L2 LINE L2 3225 3301 -12 22 35 0 0 chr2 191994792 191994821 -58693033 + AT_rich Low_complexity Low_complexity 1 29 0 261 0 0 0 chr2 191995202 191995231 -58692623 + (TA)n Simple_repeat Simple_repeat 2 30 0 225 0 0 0 chr2 191995230 191995255 -58692599 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 847 163 23 0 chr2 191995255 191995471 -58692383 - L1MA9 LINE L1 -87 6225 5909 471 271 159 38 chr2 191995489 191995803 -58692051 - L1ME3A LINE L1 -11 6159 5808 22 0 0 0 chr2 191995803 191995825 -58692029 + AT_rich Low_complexity Low_complexity 1 22 0 5387 130 24 0 chr2 191995830 191996219 -58691635 + L1PA16 LINE L1 4837 5215 -951 2195 210 9 0 chr2 191996219 191996643 -58691211 - MSTA LTR MaLR 0 428 1 5387 130 24 0 chr2 191996643 191997557 -58690297 + L1PA16 LINE L1 5215 6157 -9 327 300 63 18 chr2 191997867 191998090 -58689764 - L1ME3A LINE L1 -233 5937 5705 209 119 24 0 chr2 191998204 191998246 -58689608 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 357 238 144 6 chr2 191998291 191998451 -58689403 - L1MEd LINE L1 -3710 2419 2238 707 276 73 37 chr2 191998861 191999461 -58688393 - L1MEd LINE L1 -4614 1696 1049 26 30 0 0 chr2 191999490 191999523 -58688331 + AT_rich Low_complexity Low_complexity 1 33 0 2178 131 0 0 chr2 192000185 192000490 -58687364 - AluSq SINE Alu -8 305 1 1218 140 52 101 chr2 192001461 192001747 -58686107 - AluY SINE Alu -38 273 2 463 181 78 9 chr2 192002179 192002295 -58685559 - L1MC4 LINE L1 -1466 6576 6453 31 68 0 0 chr2 192003092 192003151 -58684703 + AT_rich Low_complexity Low_complexity 1 59 0 20159 175 32 11 chr2 192004007 192007795 -58680059 + L1M1 LINE L1 1 3971 -3594 216 111 0 0 chr2 192007795 192007831 -58680023 + (CA)n Simple_repeat Simple_repeat 1 36 0 20159 175 32 11 chr2 192007831 192010230 -58677624 + L1M1 LINE L1 3971 6317 -1248 2681 88 3 0 chr2 192010230 192010584 -58677270 + THE1A LTR MaLR 1 355 0 2750 82 19 8 chr2 192010584 192010960 -58676894 + THE1A-int LTR MaLR 1 380 -1200 325 291 55 70 chr2 192011087 192011286 -58676568 + HAL1b LINE L1 3 198 -1150 843 161 0 0 chr2 192011351 192011475 -58676379 + AluJb SINE Alu 1 124 -188 363 303 33 57 chr2 192011492 192011736 -58676118 + HAL1b LINE L1 272 509 -839 3076 197 39 51 chr2 192011744 192012673 -58675181 + MER52A LTR ERV1 1 987 -768 7041 116 28 0 chr2 192012789 192013811 -58674043 + THE1A-int LTR MaLR 366 1416 -164 2365 99 3 0 chr2 192013832 192014156 -58673698 + THE1A LTR MaLR 2 326 -29 1437 204 68 35 chr2 192014156 192014776 -58673078 - MER109 Unknown Unknown -1605 827 1 2890 122 18 31 chr2 192014876 192015366 -58672488 - SVA Other Other -889 497 14 189 0 0 0 chr2 192015369 192015390 -58672464 + (GGGAGA)n Simple_repeat Simple_repeat 1 21 0 968 305 29 20 chr2 192015408 192015992 -58671862 - L1MEc LINE L1 -3106 3109 2521 552 296 104 21 chr2 192016396 192016724 -58671130 - L1MEc LINE L1 -3939 2457 2103 699 238 73 84 chr2 192018414 192018811 -58669043 + MLT1I LTR MaLR 1 545 -4 23 0 0 0 chr2 192018891 192018914 -58668940 + AT_rich Low_complexity Low_complexity 1 23 0 316 298 19 112 chr2 192019090 192019295 -58668559 + MER5A DNA MER1_type 2 187 -2 470 235 0 35 chr2 192020288 192020403 -58667451 - MIR SINE MIR -61 201 91 406 273 58 101 chr2 192020688 192021014 -58666840 - L2 LINE L2 -7 3306 2995 299 231 120 9 chr2 192021141 192021249 -58666605 + MIR SINE MIR 130 249 -13 22 0 0 0 chr2 192023089 192023111 -58664743 + AT_rich Low_complexity Low_complexity 1 22 0 1295 147 17 0 chr2 192023130 192023361 -58664493 - L1MA4 LINE L1 -6 6294 6060 279 79 0 0 chr2 192024287 192024325 -58663529 + (CA)n Simple_repeat Simple_repeat 2 39 0 232 218 0 0 chr2 192024331 192024386 -58663468 - L1MC4 LINE L1 -1339 6703 6649 1008 185 0 0 chr2 192026236 192026398 -58661456 - FRAM SINE Alu -18 158 1 476 289 90 24 chr2 192027088 192027299 -58660555 + LTR16A LTR ERVL 226 450 0 228 323 38 30 chr2 192027829 192027962 -58659892 - MER94 DNA DNA 0 134 1 34 55 0 0 chr2 192028426 192028481 -58659373 + AT_rich Low_complexity Low_complexity 1 55 0 184 300 29 14 chr2 192028590 192028660 -58659194 - MIR3 SINE MIR -5 203 133 1789 172 55 3 chr2 192028927 192029253 -58658601 + MER61A LTR ERV1 1 343 0 1950 197 48 61 chr2 192029253 192029831 -58658023 + MER61A-int LTR ERV1 1 571 -4646 * 16009 99 32 11 chr2 192029807 192033509 -58654345 + MER61A-int LTR ERV1 1396 5217 0 1949 138 72 0 chr2 192033509 192033829 -58654025 + MER61A LTR ERV1 1 343 0 7665 25 6 0 chr2 192034010 192035278 -58652576 - L1PA3 LINE L1 0 6155 4884 584 15 0 0 chr2 192035278 192035343 -58652511 + L1P LINE L1 4098 4162 -1984 262 54 0 0 chr2 192035353 192035390 -58652464 + L1P LINE L1 4126 4162 -1984 3381 39 18 2 chr2 192035400 192035845 -58652009 + L1P LINE L1 4126 4875 -1271 183 139 0 0 chr2 192035898 192035934 -58651920 + (T)n Simple_repeat Simple_repeat 1 36 0 5812 174 42 14 chr2 192035945 192037025 -58650829 - L1PA12 LINE L1 -6466 1115 6 295 274 17 40 chr2 192037331 192037506 -58650348 + (CACCC)n Simple_repeat Simple_repeat 1 171 0 22 0 0 0 chr2 192037851 192037873 -58649981 + AT_rich Low_complexity Low_complexity 1 22 0 415 231 112 41 chr2 192039050 192039345 -58648509 + L1M4 LINE L1 4085 4400 -1746 10074 142 43 19 chr2 192039880 192040347 -58647507 + Tigger1 DNA MER2_type 129 584 -1834 1583 142 135 8 chr2 192040347 192040614 -58647240 + AluSg1 SINE Alu 1 301 -8 2162 99 13 3 chr2 192040619 192040921 -58646933 + AluSq SINE Alu 1 305 -8 10074 142 43 19 chr2 192040921 192042626 -58645228 + Tigger1 DNA MER2_type 587 2417 -1 292 59 39 0 chr2 192042666 192042717 -58645137 + (TA)n Simple_repeat Simple_repeat 2 54 0 1855 137 40 0 chr2 192042718 192042996 -58644858 - AluSx SINE Alu -23 289 1 344 139 0 114 chr2 192042996 192043075 -58644779 - Tigger1 DNA MER2_type -1091 1327 1258 21 0 0 0 chr2 192043075 192043096 -58644758 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr2 192043270 192043296 -58644558 + AT_rich Low_complexity Low_complexity 1 26 0 3561 51 2 2 chr2 192043526 192043974 -58643880 - LTR7 LTR ERV1 -2 448 1 2541 70 51 3 chr2 192043974 192044348 -58643506 - HERVH LTR ERV1 0 7713 7322 1340 136 18 5 chr2 192044346 192044566 -58643288 - HERVH LTR ERV1 -1894 5819 5597 * 4244 150 3 1 chr2 192044563 192045224 -58642630 - HERVH LTR ERV1 -2564 5149 4488 1158 98 0 0 chr2 192045226 192045389 -58642465 - HERVH LTR ERV1 -3720 3993 3831 2463 167 15 49 chr2 192045657 192046141 -58641713 + L1P5 LINE L1 5008 5474 -680 1925 152 0 32 chr2 192046141 192046451 -58641403 + AluJb SINE Alu 1 300 -12 2463 167 15 49 chr2 192046451 192046691 -58641163 + L1P5 LINE L1 5474 5721 -433 256 321 73 67 chr2 192047305 192047426 -58640428 + L2 LINE L2 2088 2207 -1107 2642 136 19 5 chr2 192047426 192047846 -58640008 + MSTA LTR MaLR 1 426 -2 256 321 73 67 chr2 192047846 192048039 -58639815 + L2 LINE L2 2207 2404 -910 689 286 65 20 chr2 192048219 192048464 -58639390 + MIR SINE MIR 7 262 0 441 175 113 0 chr2 192049125 192049222 -58638632 - MER119 DNA MER1_type 0 583 476 350 243 0 27 chr2 192049261 192049335 -58638519 - MER119 DNA MER1_type -478 105 34 847 222 118 15 chr2 192049416 192049619 -58638235 + MER58A DNA MER1_type 1 224 0 23 0 0 0 chr2 192050433 192050456 -58637398 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 192050582 192050603 -58637251 + AT_rich Low_complexity Low_complexity 1 21 0 1357 173 52 68 chr2 192052107 192052228 -58635626 + AluJo SINE Alu 1 122 -190 215 31 31 0 chr2 192052228 192052260 -58635594 + (TTG)n Simple_repeat Simple_repeat 2 34 0 1357 173 52 68 chr2 192052260 192052445 -58635409 + AluJo SINE Alu 122 302 -10 183 391 46 23 chr2 192054221 192054395 -58633459 + L2 LINE L2 2915 3092 -180 417 331 0 40 chr2 192054513 192054688 -58633166 - L2 LINE L2 -4 3309 3142 1904 211 9 82 chr2 192054706 192055265 -58632589 + MLT2B1 LTR ERVL 1 518 -2 444 226 274 0 chr2 192055670 192055794 -58632060 + MER41B LTR ERV1 163 320 -315 * 702 174 121 15 chr2 192055786 192055977 -58631877 + MER66A LTR ERV1 187 478 0 297 341 16 0 chr2 192056552 192056678 -58631176 + MIR SINE MIR 91 218 -44 1374 257 55 97 chr2 192058083 192058912 -58628942 - L1MCb LINE L1 -5304 874 65 2193 117 3 0 chr2 192059412 192059719 -58628135 + AluSx SINE Alu 1 308 -4 2975 150 10 0 chr2 192059871 192060358 -58627496 - L1PA15 LINE L1 -225 7378 6887 435 83 0 0 chr2 192060358 192060418 -58627436 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 12975 217 33 33 chr2 192060420 192062596 -58625258 - L1PA15 LINE L1 -1177 6407 4231 207 69 0 0 chr2 192062596 192062625 -58625229 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 2067 110 0 0 chr2 192062629 192062902 -58624952 - AluSg SINE Alu -37 273 1 12975 217 33 33 chr2 192062902 192064854 -58623000 - L1PA15 LINE L1 -3356 4228 2274 518 237 8 8 chr2 192066015 192066146 -58621708 + LTR65 LTR ERV1 10 140 -529 715 431 4 60 chr2 192066159 192066440 -58621414 - AluJo SINE Alu -9 303 39 1137 180 3 13 chr2 192066773 192067010 -58620844 + L1MA7 LINE L1 5660 5887 -271 283 336 92 39 chr2 192067947 192068176 -58619678 - MIR SINE MIR -2 260 20 201 253 20 10 chr2 192069831 192069930 -58617924 + (TATATG)n Simple_repeat Simple_repeat 4 103 0 2119 85 0 82 chr2 192070268 192070608 -58617246 + AluSx SINE Alu 1 312 0 511 326 13 36 chr2 192071304 192071528 -58616326 + L1ME3A LINE L1 105 323 -6217 621 297 137 0 chr2 192071830 192072042 -58615812 + L1ME3A LINE L1 853 1093 -5450 330 231 33 0 chr2 192072046 192072167 -58615687 + (TA)n Simple_repeat Simple_repeat 1 125 0 488 183 67 10 chr2 192072170 192072274 -58615580 + L1ME3A LINE L1 1102 1211 -5332 10913 34 5 0 chr2 192072332 192073659 -58614195 - L1PA5 LINE L1 -1020 5126 3794 7224 45 0 13 chr2 192073659 192074705 -58613149 + L1PA5 LINE L1 5117 6150 -4 1858 224 75 30 chr2 192074708 192075350 -58612504 + L1ME3A LINE L1 1226 1896 -4644 26 0 0 0 chr2 192076567 192076593 -58611261 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 192077600 192077621 -58610233 + AT_rich Low_complexity Low_complexity 1 21 0 1744 231 52 27 chr2 192079010 192079487 -58608367 - MLT1D LTR MaLR -1 504 16 181 293 0 0 chr2 192079911 192079952 -58607902 - L3 LINE CR1 -2 1575 1535 2075 106 32 0 chr2 192080028 192080312 -58607542 - AluSx SINE Alu -8 304 12 253 234 53 11 chr2 192080379 192080473 -58607381 + MER103 DNA DNA 68 165 -1 231 100 25 25 chr2 192081121 192081161 -58606693 + L2 LINE L2 3264 3303 -10 523 100 0 12 chr2 192082047 192082127 -58605727 - MADE1 DNA Mariner -1 79 1 625 294 52 32 chr2 192082931 192083369 -58604485 + L1ME3A LINE L1 4396 4842 -1698 526 292 99 21 chr2 192083391 192083764 -58604090 + L1ME3A LINE L1 5201 5602 -938 275 219 95 38 chr2 192084081 192084186 -58603668 + L1ME3A LINE L1 5813 5923 -633 396 267 45 34 chr2 192084261 192084437 -58603417 + L1ME3A LINE L1 6092 6269 -295 26 0 0 0 chr2 192084738 192084764 -58603090 + AT_rich Low_complexity Low_complexity 1 26 0 664 233 23 0 chr2 192085068 192085201 -58602653 + AluJo SINE Alu 1 136 -176 972 169 6 12 chr2 192085314 192085480 -58602374 - MER52A LTR ERV1 -364 1391 1227 2042 73 3 0 chr2 192086538 192086824 -58601030 + L1P LINE L1 5055 5341 -805 4812 180 28 10 chr2 192087324 192088253 -58599601 - MER52A LTR ERV1 0 1755 833 233 316 0 0 chr2 192139642 192139699 -58548155 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 359 107 0 18 chr2 192140570 192140626 -58547228 + MER39 LTR ERV1 1 55 -652 1854 178 80 10 chr2 192140631 192141030 -58546824 - Tigger2 DNA MER2_type -6 2712 2286 2118 115 79 5 chr2 192141285 192141677 -58546177 - LTR57-int LTR ERVL -4620 723 303 1058 197 29 16 chr2 192141812 192142056 -58545798 - LOR1b-int LTR ERV1 -1364 422 176 1803 172 20 60 chr2 192142090 192142491 -58545363 - LOR1b LTR ERV1 0 461 77 241 128 0 43 chr2 192142508 192142555 -58545299 + MER75 DNA T2_type 469 513 -1 294 157 157 0 chr2 192142556 192142626 -58545228 - LOR1a LTR ERV1 -416 81 1 235 152 22 22 chr2 192142673 192142719 -58545135 + LTR38 LTR ERV1 511 556 0 1495 263 125 89 chr2 192142727 192143550 -58544304 + L1M3b LINE L1 53 905 -5376 257 167 62 0 chr2 192144061 192144109 -58543745 + L2 LINE L2 3239 3289 -24 1988 243 31 4 chr2 192144894 192145384 -58542470 + MLT1D LTR MaLR 1 503 -2 26 0 0 0 chr2 192146291 192146317 -58541537 + AT_rich Low_complexity Low_complexity 1 26 0 1648 199 3 3 chr2 192146475 192146762 -58541092 - AluJo SINE Alu -15 297 11 378 375 46 28 chr2 192147333 192147658 -58540196 + L2 LINE L2 1378 1708 -1606 290 379 37 23 chr2 192147661 192147875 -58539979 + L2 LINE L2 2693 2909 -405 186 189 0 0 chr2 192149886 192149923 -58537931 + (TTA)n Simple_repeat Simple_repeat 1 37 0 390 312 78 28 chr2 192149923 192150141 -58537713 - MLT1L LTR MaLR -74 541 313 5185 85 0 36 chr2 192150141 192150955 -58536899 + L1PA13 LINE L1 5379 6163 0 27 0 0 0 chr2 192152125 192152152 -58535702 + AT_rich Low_complexity Low_complexity 1 27 0 221 156 47 0 chr2 192152213 192152277 -58535577 + (TA)n Simple_repeat Simple_repeat 2 68 0 912 213 58 93 chr2 192152282 192152456 -58535398 - MER39 LTR ERV1 0 707 528 2377 112 0 3 chr2 192152456 192152769 -58535085 - AluSx SINE Alu 0 312 1 912 213 58 93 chr2 192152769 192153168 -58534686 - MER39 LTR ERV1 -179 528 1 606 322 42 29 chr2 192153484 192153723 -58534131 - MIR SINE MIR -10 252 11 182 361 72 0 chr2 192154460 192154543 -58533311 - MIR3 SINE MIR -1 207 119 273 351 40 20 chr2 192154684 192154835 -58533019 + MER5A DNA MER1_type 10 163 -26 * 798 236 25 0 chr2 192154705 192154866 -58532988 - MER5A DNA MER1_type -18 171 7 1758 241 45 10 chr2 192155903 192156380 -58531474 - MER110A LTR ERV1 -6 485 19 301 283 16 0 chr2 192156514 192156603 -58531251 - MERVL LTR ERVL -1224 4261 4182 687 146 79 34 chr2 192158126 192158187 -58529667 - MER63 DNA MER1_type -39 1022 965 2135 41 0 22 chr2 192158187 192158480 -58529374 + AluY SINE Alu 21 307 0 687 146 79 34 chr2 192158480 192158595 -58529259 - MER63 DNA MER1_type -96 965 837 380 230 0 0 chr2 192158626 192158700 -58529154 + MER63 DNA MER1_type 987 1060 0 347 229 157 0 chr2 192158718 192158801 -58529053 - MER63 DNA MER1_type -52 784 689 225 0 0 0 chr2 192160579 192160604 -58527250 + (TG)n Simple_repeat Simple_repeat 2 26 0 719 289 26 13 chr2 192160916 192161148 -58526706 + L1MCb LINE L1 432 666 -5241 * 1399 237 52 37 chr2 192161135 192161635 -58526219 + L1MCb LINE L1 1059 1534 -4892 471 234 36 9 chr2 192161644 192161755 -58526099 + MER21B LTR ERV1 1 114 -749 213 278 28 0 chr2 192161764 192161836 -58526018 + (TA)n Simple_repeat Simple_repeat 2 75 0 216 0 0 0 chr2 192162083 192162107 -58525747 + (A)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr2 192163137 192163165 -58524689 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 192163320 192163342 -58524512 + AT_rich Low_complexity Low_complexity 1 22 0 337 327 28 9 chr2 192163911 192164018 -58523836 - MER5B DNA MER1_type -10 168 60 5525 175 54 1 chr2 192164018 192165192 -58522662 - L1MC1 LINE L1 0 6333 5099 2271 103 0 0 chr2 192165345 192165646 -58522208 - AluSg SINE Alu -9 301 1 272 280 102 25 chr2 192166017 192166135 -58521719 + MIR SINE MIR 52 178 -84 186 43 0 0 chr2 192166620 192166643 -58521211 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 1720 135 4 4 chr2 192167049 192167308 -58520546 - AluSc SINE Alu -5 304 46 1010 140 104 0 chr2 192167309 192167473 -58520381 + AluSg/x SINE Alu 105 285 -27 27 0 0 0 chr2 192167489 192167516 -58520338 + AT_rich Low_complexity Low_complexity 1 27 0 605 318 52 38 chr2 192167878 192168224 -58519630 - L2 LINE L2 0 3313 2963 366 328 39 16 chr2 192169275 192169403 -58518451 - L2 LINE L2 -1 3312 3182 230 365 19 37 chr2 192169504 192169611 -58518243 - L2 LINE L2 -213 3059 2955 207 313 114 23 chr2 192170030 192170161 -58517693 - L2 LINE L2 -940 2374 2232 263 362 134 25 chr2 192170261 192170462 -58517392 - L2 LINE L2 -1668 1646 1468 2475 155 39 0 chr2 192170462 192170874 -58516980 + MSTA LTR MaLR 1 428 0 263 362 134 25 chr2 192170874 192171540 -58516314 - L2 LINE L2 -1846 1468 685 291 28 0 0 chr2 192171834 192171870 -58515984 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 2013 69 14 4 chr2 192171870 192172145 -58515709 - AluY SINE Alu -32 279 2 28 61 0 0 chr2 192172392 192172441 -58515413 + AT_rich Low_complexity Low_complexity 1 49 0 238 143 0 0 chr2 192172986 192172997 -58514857 + MER3 DNA MER1_type 37 47 -162 812 230 61 0 chr2 192172997 192173193 -58514661 - MER3 DNA MER1_type 0 209 2 477 274 27 20 chr2 192173542 192173688 -58514166 + MIR SINE MIR 116 262 0 223 347 11 21 chr2 192174777 192174872 -58512982 + MER5B DNA MER1_type 53 146 -32 262 267 11 0 chr2 192175030 192175120 -58512734 - MER20B DNA MER1_type -180 603 513 395 266 39 8 chr2 192175317 192175445 -58512409 - MIR SINE MIR 0 262 131 512 188 103 48 chr2 192175602 192175767 -58512087 - LTR48 LTR ERV1 -1 786 613 2253 114 3 0 chr2 192176124 192176432 -58511422 - AluSc SINE Alu 0 309 1 474 304 80 31 chr2 192177107 192177393 -58510461 + ERVL LTR ERVL 818 1117 -4647 298 246 0 0 chr2 192177516 192177577 -58510277 - Tigger2 DNA MER2_type -2657 61 1 1345 195 82 19 chr2 192177582 192178107 -58509747 + LTR48 LTR ERV1 49 542 0 288 243 27 0 chr2 192178213 192178287 -58509567 + MER5C DNA MER1_type 1 76 -248 651 266 29 36 chr2 192178436 192178797 -58509057 + L1M4 LINE L1 3476 3866 -2280 1819 189 81 67 chr2 192178798 192179294 -58508560 + LTR54 LTR ERV1 8 510 0 1686 217 10 66 chr2 192179295 192179779 -58508075 + L1M4 LINE L1 3861 4317 -1829 22 0 0 0 chr2 192179991 192180013 -58507841 + AT_rich Low_complexity Low_complexity 1 22 0 445 176 56 0 chr2 192180139 192180247 -58507607 - L1MA8 LINE L1 -11 6280 6167 23 0 0 0 chr2 192180253 192180276 -58507578 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 192180592 192180622 -58507232 + AT_rich Low_complexity Low_complexity 1 30 0 226 400 58 0 chr2 192180790 192180910 -58506944 - L2 LINE L2 -7 3265 3139 1792 163 41 39 chr2 192181515 192181877 -58505977 - THE1B LTR MaLR 0 364 2 6423 109 8 2 chr2 192181878 192182774 -58505080 - THE1B-int LTR MaLR 0 1580 680 228 187 37 37 chr2 192182824 192182931 -58504923 + (TA)n Simple_repeat Simple_repeat 2 108 0 394 313 34 45 chr2 192184360 192184539 -58503315 - L2 LINE L2 -798 2516 2340 740 171 0 31 chr2 192185040 192185169 -58502685 + FLAM_A SINE Alu 1 125 -8 290 305 8 0 chr2 192185467 192185598 -58502256 + L1MDa LINE L1 1848 1979 -4561 459 0 0 0 chr2 192185602 192185653 -58502201 + (CA)n Simple_repeat Simple_repeat 2 52 0 1047 163 28 5 chr2 192185678 192185893 -58501961 + L1MA5A LINE L1 6073 6292 -5 737 286 74 62 chr2 192185987 192186441 -58501413 - MLT2B1 LTR ERVL -6 514 1 3954 116 10 10 chr2 192186682 192187284 -58500570 - LTR43 LTR ERV1 0 602 1 1739 143 8 57 chr2 192187448 192187811 -58500043 - MER4A LTR ERV1 0 664 261 560 115 31 10 chr2 192187811 192187907 -58499947 - MER4A LTR ERV1 -566 98 1 25 0 0 0 chr2 192187911 192187936 -58499918 + AT_rich Low_complexity Low_complexity 1 25 0 2250 109 54 14 chr2 192188102 192188452 -58499402 + THE1B LTR MaLR 1 364 0 2036 127 41 36 chr2 192188557 192188919 -58498935 + THE1B LTR MaLR 1 364 0 2194 107 3 0 chr2 192189104 192189404 -58498450 - AluSx SINE Alu -11 301 1 382 261 50 8 chr2 192190201 192190320 -58497534 - MER94 DNA DNA 0 134 11 351 259 112 65 chr2 192191731 192191770 -58496084 + Charlie8 DNA MER1_type 93 129 -201 1580 184 13 20 chr2 192191770 192192075 -58495779 + AluJo SINE Alu 1 303 -9 2228 97 3 0 chr2 192192075 192192364 -58495490 + AluSp SINE Alu 4 293 -20 351 259 112 65 chr2 192192364 192192493 -58495361 + Charlie8 DNA MER1_type 128 270 -60 569 145 47 70 chr2 192192725 192192897 -58494957 - MER53 DNA DNA 0 189 22 1742 210 85 38 chr2 192193125 192193620 -58494234 - MLT2B1 LTR ERVL -2 518 1 25 0 0 0 chr2 192193710 192193735 -58494119 + AT_rich Low_complexity Low_complexity 1 25 0 2053 113 0 3 chr2 192194210 192194492 -58493362 + AluSg SINE Alu 1 281 -29 281 150 17 17 chr2 192194962 192195022 -58492832 + HsTC2 DNA Tc2 3 62 -1836 2181 111 7 7 chr2 192195254 192195561 -58492293 - AluSq SINE Alu -6 307 1 534 224 15 22 chr2 192195835 192195969 -58491885 - L1PB4 LINE L1 0 6156 6024 2588 166 19 42 chr2 192196550 192196863 -58490991 - L1P LINE L1 -2709 3437 3141 2264 67 0 0 chr2 192196863 192197147 -58490707 - AluY SINE Alu 0 311 28 2588 166 19 42 chr2 192197147 192197400 -58490454 - L1P LINE L1 -3005 3141 2884 9971 152 14 9 chr2 192197400 192197598 -58490256 + L1PA11 LINE L1 3480 3675 -2499 215 0 67 0 chr2 192197598 192197628 -58490226 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 9971 152 14 9 chr2 192197628 192198068 -58489786 + L1PA11 LINE L1 3675 4111 -2063 2219 43 60 0 chr2 192198068 192198350 -58489504 + AluY SINE Alu 1 299 -12 9971 152 14 9 chr2 192198350 192200388 -58487466 + L1PA11 LINE L1 4111 6174 0 779 297 103 76 chr2 192201144 192201365 -58486489 + L2 LINE L2 1978 2191 -1123 1497 162 0 20 chr2 192201365 192201612 -58486242 + AluSx SINE Alu 1 242 -70 779 297 103 76 chr2 192201612 192202117 -58485737 + L2 LINE L2 2191 2724 -590 1512 177 50 41 chr2 192202118 192202480 -58485374 + MLT1A1 LTR MaLR 1 365 0 410 280 34 0 chr2 192202495 192202613 -58485241 + L1ME LINE L1 94 215 -5855 576 271 57 44 chr2 192202648 192203031 -58484823 + L1M4 LINE L1 2986 3373 -2773 2287 144 25 20 chr2 192203108 192203546 -58484308 + L1MA8 LINE L1 5848 6287 -4 2207 248 120 20 chr2 192203558 192204436 -58483418 + L1MC4 LINE L1 6935 7899 -143 621 283 102 34 chr2 192204457 192204750 -58483104 + L2 LINE L2 2996 3308 -5 231 281 188 62 chr2 192205149 192205309 -58482545 + L2 LINE L2 2894 3073 -199 34 84 0 0 chr2 192206848 192206931 -58480923 + AT_rich Low_complexity Low_complexity 1 83 0 1544 34 29 10 chr2 192206931 192207138 -58480716 - L1PA2 LINE L1 -3 6152 5942 212 314 6 40 chr2 192207248 192207423 -58480431 + G-rich Low_complexity Low_complexity 1 169 0 380 132 40 13 chr2 192207512 192207588 -58480266 + L1P LINE L1 4854 4931 -1215 36 40 0 0 chr2 192207592 192207642 -58480212 + AT_rich Low_complexity Low_complexity 1 50 0 312 206 67 12 chr2 192207642 192207807 -58480047 + (TTAAA)n Simple_repeat Simple_repeat 5 178 0 2146 23 0 0 chr2 192207813 192208070 -58479784 + L1P LINE L1 4922 5178 -968 659 222 142 0 chr2 192208271 192208433 -58479421 - FAM SINE Alu 0 49 1 195 167 0 0 chr2 192208598 192208640 -58479214 + A-rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 192208838 192208866 -58478988 + AT_rich Low_complexity Low_complexity 1 28 0 558 198 138 0 chr2 192209105 192209221 -58478633 - FLAM_C SINE Alu -1 132 1 261 248 30 69 chr2 192209406 192209507 -58478347 + MIR SINE MIR 10 106 -156 228 271 12 12 chr2 192209576 192209636 -58478218 + (TA)n Simple_repeat Simple_repeat 1 63 -22 1161 137 68 18 chr2 192209636 192209855 -58477999 - L1PB4 LINE L1 -1 6155 5926 228 271 12 12 chr2 192209855 192209879 -58477975 + (TA)n Simple_repeat Simple_repeat 62 85 0 363 256 47 0 chr2 192210562 192210648 -58477206 + L1MC4 LINE L1 6614 6703 -1339 2454 128 30 41 chr2 192211517 192211953 -58475901 - Tigger2a DNA MER2_type -3 431 1 596 199 35 157 chr2 192211953 192211986 -58475868 - L1M3b LINE L1 -4950 1331 1296 2275 71 7 14 chr2 192211986 192212280 -58475574 + AluSg SINE Alu 1 292 -18 596 199 35 157 chr2 192212280 192212532 -58475322 - L1M3b LINE L1 -4985 1296 1081 1772 189 21 44 chr2 192212633 192212706 -58475148 + LTR57-int LTR ERVL 704 777 -4566 2231 92 0 13 chr2 192212706 192213011 -58474843 - AluY SINE Alu -10 301 1 1772 189 21 44 chr2 192213011 192213366 -58474488 + LTR57-int LTR ERVL 777 1122 -4221 2900 130 47 4 chr2 192213852 192214382 -58473472 + MER49-int LTR ERV1 1230 1782 -6338 1472 209 37 68 chr2 192214588 192215205 -58472649 + MER49-int LTR ERV1 3139 3736 -2862 1258 149 30 47 chr2 192215238 192215534 -58472320 + MER49-int LTR ERV1 3731 4021 -2577 724 150 10 140 chr2 192215773 192215966 -58471888 + MER49-int LTR ERV1 3786 3953 -4167 2595 106 16 0 chr2 192216028 192216397 -58471457 - THE1C LTR MaLR 0 375 1 594 137 43 72 chr2 192216449 192216654 -58471200 + MER49-int LTR ERV1 3014 4889 -1442 1702 170 8 3 chr2 192216820 192217134 -58470720 + MER49-int LTR ERV1 6439 7097 -3 207 0 0 0 chr2 192217139 192217162 -58470692 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4250 145 25 43 chr2 192217162 192217912 -58469942 + MER49 LTR ERV1 16 752 -171 281 189 0 19 chr2 192218680 192218733 -58469121 + LTR38-int LTR ERV1 4795 4846 -108 703 273 90 42 chr2 192218797 192219212 -58468642 + LTR38 LTR ERV1 137 547 -9 2276 108 3 3 chr2 192219593 192219899 -58467955 - AluSx SINE Alu -6 306 1 202 322 0 0 chr2 192220129 192220219 -58467635 + T-rich Low_complexity Low_complexity 1 90 0 243 0 0 0 chr2 192220355 192220382 -58467472 + (TG)n Simple_repeat Simple_repeat 2 28 0 243 263 38 0 chr2 192221079 192221159 -58466695 + (TA)n Simple_repeat Simple_repeat 2 84 0 2314 109 3 0 chr2 192221850 192222162 -58465692 - AluSq SINE Alu 0 313 1 457 313 38 38 chr2 192222253 192222592 -58465262 - HAL1 LINE L1 -847 1660 1322 230 274 24 12 chr2 192222895 192222979 -58464875 + (TATATG)n Simple_repeat Simple_repeat 2 86 0 301 96 36 24 chr2 192222994 192223077 -58464777 + (TA)n Simple_repeat Simple_repeat 2 85 0 280 56 0 0 chr2 192223696 192223732 -58464122 - U2 snRNA snRNA -152 36 1 2242 95 0 7 chr2 192224074 192224368 -58463486 - AluSg SINE Alu -18 292 1 728 181 7 47 chr2 192225149 192225298 -58462556 + Tigger1 DNA MER2_type 1 143 -2275 16848 149 42 23 chr2 192225298 192229184 -58458670 - MER52A-int LTR ERV1 -3027 4064 1 2238 222 85 138 chr2 192229184 192230335 -58457519 - MER52A LTR ERV1 0 1755 666 198 389 47 40 chr2 192231099 192231248 -58456606 - L2 LINE L2 -6 3266 3117 514 213 40 59 chr2 192231348 192231550 -58456304 + L1ME LINE L1 5578 5775 -346 405 0 0 0 chr2 192232399 192232444 -58455410 + (TG)n Simple_repeat Simple_repeat 1 45 0 370 308 159 31 chr2 192233580 192233775 -58454079 - MLT1H LTR MaLR -9 540 321 333 217 54 0 chr2 192234665 192234794 -58453060 + (TA)n Simple_repeat Simple_repeat 1 136 0 196 324 87 40 chr2 192236678 192236851 -58451003 + MIR SINE MIR 5 185 -77 375 125 0 0 chr2 192236958 192237030 -58450824 + (GA)n Simple_repeat Simple_repeat 1 72 0 1417 281 16 8 chr2 192237245 192237626 -58450228 - LTR16A LTR ERVL -5 445 62 439 363 31 26 chr2 192238097 192238290 -58449564 + MIR SINE MIR 13 206 -56 1488 99 0 28 chr2 192238739 192238952 -58448902 - AluY SINE Alu -104 207 1 1549 211 24 84 chr2 192239496 192240046 -58447808 + MLT2B1 LTR ERVL 4 520 0 215 103 26 0 chr2 192240335 192240374 -58447480 + (TG)n Simple_repeat Simple_repeat 2 41 0 204 40 0 0 chr2 192240519 192240544 -58447310 + (TC)n Simple_repeat Simple_repeat 2 26 0 375 235 129 8 chr2 192241169 192241301 -58446553 - MIR SINE MIR -50 212 65 1093 236 84 37 chr2 192241679 192241950 -58445904 + MLT1C LTR MaLR 20 320 -147 2042 161 42 82 chr2 192241950 192242214 -58445640 + MER66B LTR ERV1 1 237 -249 1971 93 12 81 chr2 192242214 192242535 -58445319 + AluSx SINE Alu 1 299 -13 2042 161 42 82 chr2 192242535 192242773 -58445081 + MER66B LTR ERV1 237 483 -3 1093 236 84 37 chr2 192242773 192242929 -58444925 + MLT1C LTR MaLR 320 467 0 512 212 8 23 chr2 192242945 192243077 -58444777 + L1PB4 LINE L1 6024 6153 -3 21 0 0 0 chr2 192243327 192243348 -58444506 + AT_rich Low_complexity Low_complexity 1 21 0 197 294 15 15 chr2 192243411 192243479 -58444375 + MIR SINE MIR 46 113 -149 854 177 30 66 chr2 192243893 192244091 -58443763 + LTR8 LTR ERV1 1 208 -507 1608 191 46 51 chr2 192244092 192244506 -58443348 - LTR8A LTR ERV1 -110 617 206 8210 96 6 7 chr2 192244506 192245751 -58442103 + L1P LINE L1 2109 3352 -2794 5108 138 45 96 chr2 192245751 192246934 -58440920 + pTR5 LTR ERV1 744 2025 -413 355 255 10 0 chr2 192246934 192247032 -58440822 + LTR30 LTR ERV1 544 642 -80 1534 95 0 9 chr2 192247035 192247257 -58440597 + pTR5 LTR ERV1 172 391 -2047 13609 91 7 7 chr2 192247257 192247697 -58440157 + L1PA7 LINE L1 3347 3786 -2368 1868 103 0 8 chr2 192247697 192247950 -58439904 + AluSg SINE Alu 60 310 0 13609 91 7 7 chr2 192247950 192250318 -58437536 + L1PA7 LINE L1 3785 6150 -4 28 0 0 0 chr2 192250321 192250349 -58437505 + AT_rich Low_complexity Low_complexity 1 28 0 29 47 0 0 chr2 192250457 192250500 -58437354 + AT_rich Low_complexity Low_complexity 1 43 0 2105 128 144 5 chr2 192250876 192251252 -58436602 - MSTA LTR MaLR 0 428 1 26 50 0 0 chr2 192252260 192252300 -58435554 + AT_rich Low_complexity Low_complexity 1 40 0 334 268 0 31 chr2 192252584 192252681 -58435173 + L2 LINE L2 2671 2764 -550 187 243 108 14 chr2 192253694 192253768 -58434086 - L2 LINE L2 -797 2517 2437 3274 118 16 2 chr2 192253958 192254448 -58433406 - LOR1a LTR ERV1 0 497 1 23 54 0 0 chr2 192255072 192255109 -58432745 + AT_rich Low_complexity Low_complexity 1 37 0 34 0 0 0 chr2 192255420 192255454 -58432400 + AT_rich Low_complexity Low_complexity 1 34 0 25 0 0 0 chr2 192256016 192256041 -58431813 + AT_rich Low_complexity Low_complexity 1 25 0 2938 101 113 121 chr2 192259141 192259825 -58428029 + L1MA5A LINE L1 5620 6297 0 1554 354 55 39 chr2 192261274 192262816 -58425038 + ERVL LTR ERVL 970 2653 -3111 1173 279 88 15 chr2 192262910 192263128 -58424726 + L1M4 LINE L1 2334 2535 -3611 1211 186 87 62 chr2 192263128 192263483 -58424371 - THE1B LTR MaLR 0 364 1 1173 279 88 15 chr2 192263483 192263938 -58423916 + L1M4 LINE L1 2535 3056 -3090 645 311 100 8 chr2 192263956 192264587 -58423267 + L1M4 LINE L1 3106 3794 -2352 799 226 43 25 chr2 192264588 192264823 -58423031 - MSTB LTR MaLR 0 426 188 192 97 0 0 chr2 192264823 192264854 -58423000 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4157 123 14 25 chr2 192264855 192264883 -58422971 - L1PA14 LINE L1 -7 6154 6127 1966 136 7 0 chr2 192264883 192265178 -58422676 + AluSx SINE Alu 4 300 -12 4157 123 14 25 chr2 192265178 192265858 -58421996 - L1PA14 LINE L1 -34 6127 5454 1682 136 3 0 chr2 192265858 192266229 -58421625 + L1PA14 LINE L1 5083 5454 -707 1117 132 20 46 chr2 192266229 192266426 -58421428 - MSTB LTR MaLR -234 192 1 661 252 56 35 chr2 192266426 192266712 -58421142 + L1M4 LINE L1 3791 4082 -2064 251 193 53 0 chr2 192266770 192266827 -58421027 - MLT1A1 LTR MaLR -217 148 89 24 53 0 0 chr2 192267078 192267116 -58420738 + AT_rich Low_complexity Low_complexity 1 38 0 2398 70 0 3 chr2 192267658 192267970 -58419884 + AluY SINE Alu 1 311 0 268 252 114 24 chr2 192267979 192268102 -58419752 - MER94 DNA DNA 0 134 1 1836 201 60 10 chr2 192268620 192269018 -58418836 + MER47B DNA MER2_type 1 418 0 21 82 0 0 chr2 192269322 192269371 -58418483 + AT_rich Low_complexity Low_complexity 1 49 0 23 54 0 0 chr2 192269850 192269887 -58417967 + AT_rich Low_complexity Low_complexity 1 37 0 315 354 83 7 chr2 192269950 192270130 -58417724 - MIR SINE MIR -50 212 18 27 49 0 0 chr2 192270418 192270459 -58417395 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 192271690 192271711 -58416143 + AT_rich Low_complexity Low_complexity 1 21 0 315 250 100 20 chr2 192272578 192272678 -58415176 + L2 LINE L2 3150 3257 -15 25 51 0 0 chr2 192272991 192273030 -58414824 + AT_rich Low_complexity Low_complexity 1 39 0 214 279 149 43 chr2 192273900 192274061 -58413793 - MIR SINE MIR -71 191 14 2130 104 21 0 chr2 192274296 192274585 -58413269 - AluSp SINE Alu -18 295 1 745 110 16 8 chr2 192275728 192275855 -58411999 - L1MA9 LINE L1 0 6312 6185 24 0 0 0 chr2 192276645 192276669 -58411185 + AT_rich Low_complexity Low_complexity 1 24 0 2746 226 60 7 chr2 192276857 192277477 -58410377 - MER82 DNA MER2_type 0 653 1 216 372 24 37 chr2 192277651 192277815 -58410039 + L2 LINE L2 2703 2864 -450 308 307 88 22 chr2 192278700 192278837 -58409017 - MIR3 SINE MIR -23 185 40 312 326 61 14 chr2 192280434 192280581 -58407273 - MLT1L LTR MaLR 0 615 462 21 0 0 0 chr2 192281993 192282014 -58405840 + AT_rich Low_complexity Low_complexity 1 21 0 2497 206 84 35 chr2 192282185 192282271 -58405583 + LTR9B LTR ERV1 7 87 -557 2379 90 3 3 chr2 192282271 192282582 -58405272 + AluSq SINE Alu 1 311 -2 2497 206 84 35 chr2 192282582 192283103 -58404751 + LTR9B LTR ERV1 87 644 0 328 262 243 0 chr2 192283636 192283743 -58404111 - HAL1 LINE L1 -625 1882 1750 791 318 36 22 chr2 192283764 192284208 -58403646 - HAL1 LINE L1 -821 1686 1237 24 32 0 0 chr2 192285063 192285094 -58402760 + AT_rich Low_complexity Low_complexity 1 31 0 348 272 48 0 chr2 192285646 192285749 -58402105 - MIR SINE MIR -87 175 68 1876 144 10 0 chr2 192285784 192286089 -58401765 + L1PA16 LINE L1 5857 6164 -2 244 218 0 36 chr2 192286104 192286159 -58401695 - MER5B DNA MER1_type -1 177 125 755 171 6 0 chr2 192286171 192286329 -58401525 + GA-rich Low_complexity Low_complexity 1 159 0 243 0 0 0 chr2 192286329 192286356 -58401498 + (CAGG)n Simple_repeat Simple_repeat 1 27 0 292 317 8 57 chr2 192286356 192286479 -58401375 - MER5B DNA MER1_type -61 117 1 199 353 29 0 chr2 192286487 192286555 -58401299 - MER5A DNA MER1_type 0 189 120 252 331 110 60 chr2 192286769 192287288 -58400566 - L2 LINE L2 -1662 1652 1108 24 0 0 0 chr2 192287328 192287352 -58400502 + AT_rich Low_complexity Low_complexity 1 24 0 1093 290 39 12 chr2 192287850 192288257 -58399597 + L1PBa LINE L1 37 454 -6409 1113 179 34 55 chr2 192288282 192288517 -58399337 + AluJb SINE Alu 1 230 -82 2494 290 28 41 chr2 192288540 192289620 -58398234 + L1PBa LINE L1 475 1540 -5323 4155 133 9 5 chr2 192289620 192290261 -58397593 + LTR9B LTR ERV1 1 644 0 430 256 0 0 chr2 192290268 192290354 -58397500 + L1PBa LINE L1 1545 1630 -5233 * 13303 212 33 21 chr2 192290328 192290978 -58396876 + L1PB3 LINE L1 1 642 -5569 378 42 0 0 chr2 192290978 192291026 -58396828 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 13303 212 33 21 chr2 192291026 192294632 -58393222 + L1PB3 LINE L1 642 4203 -2008 213 39 0 0 chr2 192294632 192294658 -58393196 + (GAA)n Simple_repeat Simple_repeat 2 27 0 13303 212 33 21 chr2 192294658 192296015 -58391839 + L1PB3 LINE L1 4203 5858 -353 231 164 55 0 chr2 192296015 192296070 -58391784 - LTR66 LTR ERVL -171 439 382 13303 212 33 21 chr2 192296070 192296426 -58391428 + L1PB3 LINE L1 5858 6208 -3 2181 102 3 0 chr2 192296601 192296929 -58390925 + AluSp SINE Alu 1 329 0 363 252 97 22 chr2 192298927 192299153 -58388701 - L1M4 LINE L1 -1439 4707 4465 23 33 0 0 chr2 192299225 192299255 -58388599 + AT_rich Low_complexity Low_complexity 1 30 0 1664 134 3 91 chr2 192299311 192299653 -58388201 - AluSx SINE Alu 0 312 1 243 146 0 0 chr2 192299718 192299759 -58388095 + (TA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 192299764 192299793 -58388061 + AT_rich Low_complexity Low_complexity 1 29 0 1387 217 39 0 chr2 192299952 192300233 -58387621 + AluJo SINE Alu 1 292 -20 26 50 0 0 chr2 192300964 192301004 -58386850 + AT_rich Low_complexity Low_complexity 1 40 0 288 0 0 0 chr2 192301769 192301801 -58386053 + (CA)n Simple_repeat Simple_repeat 2 33 0 197 108 27 0 chr2 192303212 192303249 -58384605 + (CA)n Simple_repeat Simple_repeat 1 38 0 188 200 0 40 chr2 192303264 192303314 -58384540 + L2 LINE L2 3262 3309 -4 1265 123 19 30 chr2 192303540 192303852 -58384002 - THE1B LTR MaLR 0 364 1 303 93 0 0 chr2 192306667 192306710 -58381144 + (TG)n Simple_repeat Simple_repeat 1 43 0 371 326 10 0 chr2 192306986 192307084 -58380770 + MER81 DNA DNA 16 114 0 551 279 146 13 chr2 192307356 192307582 -58380272 - MIR SINE MIR 0 262 7 924 83 7 21 chr2 192308854 192308999 -58378855 - MLT1B-int LTR MaLR -1228 143 1 1705 157 67 59 chr2 192308999 192309374 -58378480 - MLT1B LTR MaLR 0 390 13 242 350 60 0 chr2 192309420 192309520 -58378334 - MIR3 SINE MIR -47 161 56 2315 100 0 0 chr2 192309604 192309903 -58377951 - AluSx SINE Alu -13 299 1 22 70 0 0 chr2 192312559 192312602 -58375252 + AT_rich Low_complexity Low_complexity 1 43 0 2053 144 53 14 chr2 192312691 192313052 -58374802 + THE1C LTR MaLR 1 375 0 9603 133 23 38 chr2 192313053 192313480 -58374374 + THE1C-int LTR MaLR 2 434 -1146 2337 110 0 0 chr2 192313480 192313789 -58374065 - AluY SINE Alu -2 309 1 9603 133 23 38 chr2 192313789 192314964 -58372890 + THE1C-int LTR MaLR 434 1580 0 2001 132 58 30 chr2 192314964 192315329 -58372525 + THE1C LTR MaLR 1 375 0 821 209 75 21 chr2 192316946 192317307 -58370547 + MER63 DNA MER1_type 1 442 -619 716 211 0 2 chr2 192317339 192317560 -58370294 + MER63 DNA MER1_type 608 862 -199 300 341 14 0 chr2 192317628 192317766 -58370088 - HAL1 LINE L1 -833 1674 1535 2435 70 0 3 chr2 192317977 192318279 -58369575 - AluY SINE Alu -10 301 1 656 186 32 0 chr2 192318281 192318405 -58369449 - AluJo/FLAM SINE Alu -173 129 2 26 30 0 0 chr2 192318428 192318461 -58369393 + AT_rich Low_complexity Low_complexity 1 33 0 5903 100 13 37 chr2 192319423 192319618 -58368236 - L1PB1 LINE L1 -2 6149 5951 2255 88 3 0 chr2 192319618 192319902 -58367952 - AluY SINE Alu -26 285 1 5903 100 13 37 chr2 192319902 192320671 -58367183 - L1PB1 LINE L1 -200 5951 5211 12101 110 132 12 chr2 192320672 192323162 -58364692 - L1PBa LINE L1 -3437 3425 634 1163 170 0 0 chr2 192323162 192323362 -58364492 - L1PBa LINE L1 -6663 200 1 22 0 0 0 chr2 192324050 192324072 -58363782 + AT_rich Low_complexity Low_complexity 1 22 0 2090 225 41 41 chr2 192324488 192324901 -58362953 + L1MDa LINE L1 2397 2808 -3732 2471 169 33 18 chr2 192324901 192325299 -58362555 - LOR1b LTR ERV1 0 461 54 2071 112 10 7 chr2 192325299 192325594 -58362260 - AluSg SINE Alu -14 296 1 2471 169 33 18 chr2 192325594 192325645 -58362209 - LOR1b LTR ERV1 -407 54 5 2090 225 41 41 chr2 192325645 192326267 -58361587 + L1MDa LINE L1 2808 3434 -3106 409 209 115 0 chr2 192326270 192326409 -58361445 + L1MDa LINE L1 3987 4141 -2399 315 49 0 0 chr2 192326426 192326467 -58361387 + (CA)n Simple_repeat Simple_repeat 1 41 0 367 132 0 0 chr2 192326467 192326520 -58361334 + MST-int LTR MaLR 29 81 -1570 1782 111 107 127 chr2 192326520 192327016 -58360838 + LTR21A LTR ERV1 1 486 -19 358 113 84 14 chr2 192327016 192327087 -58360767 + THE1C-int LTR MaLR 78 153 -1427 3794 143 68 8 chr2 192327087 192327710 -58360144 + THE1C-int LTR MaLR 97 762 -818 2476 101 93 19 chr2 192327710 192328127 -58359727 + LTR7 LTR ERV1 1 448 -2 3794 143 68 8 chr2 192328127 192328145 -58359709 + THE1C-int LTR MaLR 762 777 -803 14554 99 18 24 chr2 192328145 192330831 -58357023 + HERVH LTR ERV1 16 2992 -4721 5566 110 15 4 chr2 192330838 192331682 -58356172 + HERVH LTR ERV1 3140 3993 -3720 4353 143 0 1 chr2 192331684 192332347 -58355507 + HERVH LTR ERV1 4488 5149 -2564 1361 130 19 0 chr2 192332348 192332564 -58355290 + HERVH LTR ERV1 5600 5819 -1894 2368 79 53 21 chr2 192332564 192332942 -58354912 + HERVH LTR ERV1 7324 7713 0 2546 96 96 7 chr2 192332942 192333349 -58354505 + LTR7 LTR ERV1 1 443 -7 5264 132 27 4 chr2 192333359 192334163 -58353691 + THE1C-int LTR MaLR 758 1580 0 1447 133 4 13 chr2 192334163 192334389 -58353465 + THE1C LTR MaLR 1 224 -151 2000 168 59 57 chr2 192334398 192334856 -58352998 + LTR2B LTR ERV1 32 490 0 1064 146 11 11 chr2 192334856 192335020 -58352834 + THE1C LTR MaLR 212 375 0 928 216 78 26 chr2 192335067 192335491 -58352363 + L1MDa LINE L1 4185 4756 -1784 701 130 68 20 chr2 192335496 192335642 -58352212 + L1MD1 LINE L1 6090 6242 0 25 51 0 0 chr2 192335973 192336012 -58351842 + AT_rich Low_complexity Low_complexity 1 39 0 869 179 174 134 chr2 192337274 192337601 -58350253 + MSTD LTR MaLR 2 348 -48 3408 88 8 14 chr2 192337601 192338091 -58349763 + L1PA8A LINE L1 5643 6129 -2 869 179 174 134 chr2 192338091 192338143 -58349711 + MSTD LTR MaLR 348 396 0 1628 183 35 3 chr2 192338143 192338460 -58349394 + MSTD-int LTR MaLR 1 327 -1408 1967 166 45 38 chr2 192338460 192338767 -58349087 + MLT2A2 LTR ERVL 1 313 -241 1631 126 129 36 chr2 192338767 192339100 -58348754 - THE1B LTR MaLR 0 364 1 1967 166 45 38 chr2 192339100 192339344 -58348510 + MLT2A2 LTR ERVL 313 554 0 4598 256 88 39 chr2 192339387 192339654 -58348200 + MSTD-int LTR MaLR 350 603 -1132 2067 87 4 4 chr2 192339654 192339930 -58347924 + AluSq SINE Alu 1 276 -37 216 0 0 0 chr2 192339934 192339958 -58347896 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4598 256 88 39 chr2 192339958 192341007 -58346847 + MSTD-int LTR MaLR 605 1735 0 1354 188 95 63 chr2 192341011 192341389 -58346465 + MSTD LTR MaLR 5 394 -2 1371 226 75 20 chr2 192344371 192344720 -58343134 + MLT1A2 LTR MaLR 1 368 -6 216 349 114 54 chr2 192344913 192345211 -58342643 - L2 LINE L2 -2 3270 2955 439 247 14 68 chr2 192345960 192346106 -58341748 + MER103 DNA DNA 8 145 -21 28 29 0 0 chr2 192346581 192346616 -58341238 + AT_rich Low_complexity Low_complexity 1 35 0 295 353 10 64 chr2 192346784 192346988 -58340866 + L1ME LINE L1 270 462 -5743 1115 140 0 0 chr2 192346993 192347150 -58340704 - LOR1a LTR ERV1 0 497 341 525 273 99 88 chr2 192347165 192347759 -58340095 + L1ME LINE L1 1209 1809 -4587 24 32 0 0 chr2 192348137 192348168 -58339686 + AT_rich Low_complexity Low_complexity 1 31 0 2418 84 7 0 chr2 192349072 192349368 -58338486 + AluSc SINE Alu 1 298 -11 21 71 0 0 chr2 192350725 192350767 -58337087 + AT_rich Low_complexity Low_complexity 1 42 0 26 88 0 0 chr2 192351032 192351100 -58336754 + AT_rich Low_complexity Low_complexity 1 68 0 2663 218 23 35 chr2 192351750 192352405 -58335449 + MLT1D-int LTR MaLR 237 883 -488 1764 209 16 82 chr2 192352757 192353197 -58334657 + MLT1D-int LTR MaLR 961 1371 0 1371 242 121 28 chr2 192353197 192353659 -58334195 + MLT1D LTR MaLR 1 505 0 1346 244 51 3 chr2 192353660 192353975 -58333879 - L1M4b LINE L1 -6527 332 3 240 286 0 0 chr2 192355691 192355754 -58332100 + (TATATG)n Simple_repeat Simple_repeat 3 65 0 28 29 0 0 chr2 192355918 192355953 -58331901 + AT_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr2 192356364 192356397 -58331457 + AT_rich Low_complexity Low_complexity 1 33 0 189 208 56 56 chr2 192357072 192357144 -58330710 - L2 LINE L2 0 3313 3242 182 273 212 20 chr2 192357394 192357493 -58330361 + L2 LINE L2 3138 3255 -17 21 0 0 0 chr2 192357725 192357746 -58330108 + AT_rich Low_complexity Low_complexity 1 21 0 543 292 207 14 chr2 192358536 192358903 -58328951 + L2 LINE L2 2876 3313 0 557 199 20 122 chr2 192359112 192359237 -58328617 + L1M4 LINE L1 3163 3299 -2847 1795 156 4 0 chr2 192359237 192359512 -58328342 + AluSx SINE Alu 32 307 -5 557 199 20 122 chr2 192359512 192359582 -58328272 + L1M4 LINE L1 3299 3321 -2825 1980 132 4 0 chr2 192359582 192359863 -58327991 + AluSc SINE Alu 3 284 -25 557 199 20 122 chr2 192359863 192359962 -58327892 + L1M4 LINE L1 3321 3428 -2718 2408 66 3 3 chr2 192360270 192360575 -58327279 + AluY SINE Alu 1 305 -6 784 163 0 0 chr2 192360903 192361038 -58326816 + L1MA7 LINE L1 5742 5876 -415 261 377 63 17 chr2 192361598 192361803 -58326051 - MIR SINE MIR -48 214 3 22 35 0 0 chr2 192362354 192362383 -58325471 + AT_rich Low_complexity Low_complexity 1 29 0 1562 168 70 25 chr2 192362432 192362790 -58325064 - THE1C LTR MaLR -1 374 1 5550 170 17 154 chr2 192363644 192365251 -58322603 - L1PA15 LINE L1 -2 6814 4989 1631 95 16 32 chr2 192365251 192365504 -58322350 - MER4B LTR ERV1 0 610 362 5550 170 17 154 chr2 192365504 192365547 -58322307 - L1PA15 LINE L1 -1827 4989 4942 618 134 13 8 chr2 192365547 192365753 -58322101 - MER4A LTR ERV1 -351 313 1 5550 170 17 154 chr2 192365753 192366395 -58321459 - L1PA15 LINE L1 -1874 4942 4607 4183 138 85 17 chr2 192366395 192367168 -58320686 + LTR1B LTR ERV1 1 826 0 5550 170 17 154 chr2 192367168 192367671 -58320183 - L1PA15 LINE L1 -2209 4607 4037 3567 225 53 24 chr2 192367699 192368931 -58318923 - L1PA15 LINE L1 -4120 2677 1426 2250 316 17 60 chr2 192369060 192369426 -58318428 - L1PA15 LINE L1 -5934 853 473 2355 152 8 3 chr2 192369426 192369788 -58318066 - THE1B LTR MaLR 0 364 1 2250 316 17 60 chr2 192369788 192370311 -58317543 - L1PA15 LINE L1 -6314 473 2 361 230 23 0 chr2 192372381 192372468 -58315386 + MER89 LTR ERV1 1 89 -470 * 1788 205 31 3 chr2 192372443 192372794 -58315060 + MER89 LTR ERV1 199 559 0 3615 250 34 60 chr2 192373346 192374433 -58313421 + MER69B DNA AcHobo 2 1055 -1471 2343 89 7 3 chr2 192374433 192374735 -58313119 - AluSq SINE Alu -10 303 1 3615 250 34 60 chr2 192374735 192374875 -58312979 + MER69B DNA AcHobo 1055 1197 -29 235 268 183 33 chr2 192375295 192375448 -58312406 + L2 LINE L2 3113 3288 -25 186 262 0 98 chr2 192375493 192375554 -58312300 - L2 LINE L2 -36 3236 3182 252 311 60 55 chr2 192375685 192375868 -58311986 + MIR SINE MIR 8 191 -71 236 324 28 66 chr2 192376823 192377036 -58310818 + MLT1K LTR MaLR 208 412 -176 263 293 8 68 chr2 192377615 192377748 -58310106 + MLT1J LTR MaLR 221 345 -166 247 167 0 0 chr2 192377735 192377777 -58310077 - MSTC LTR MaLR -382 46 5 * 23 0 0 0 chr2 192378918 192378941 -58308913 + AT_rich Low_complexity Low_complexity 1 23 0 211 280 40 0 chr2 192378995 192379045 -58308809 + L2 LINE L2 3245 3296 -17 643 363 11 14 chr2 192380404 192380759 -58307095 + L1PA13 LINE L1 5 358 -6429 247 203 14 14 chr2 192381223 192381292 -58306562 - MLT1E1 LTR MaLR -9 645 577 1153 194 19 88 chr2 192381611 192381930 -58305924 - AluSx SINE Alu -3 299 3 741 242 62 27 chr2 192382337 192382593 -58305261 + LTR8 LTR ERV1 1 265 -426 * 799 269 46 53 chr2 192382538 192382951 -58304903 - LTR8A LTR ERV1 -112 615 206 1293 259 0 12 chr2 192382958 192383379 -58304475 + L1P LINE L1 2117 2532 -3614 433 271 53 18 chr2 192383807 192383977 -58303877 + L1MEc LINE L1 1582 1757 -4639 24 32 0 0 chr2 192384403 192384434 -58303420 + AT_rich Low_complexity Low_complexity 1 31 0 20713 67 2 4 chr2 192386330 192389652 -58298202 - L1P LINE L1 -2597 3549 105 207 204 0 0 chr2 192389781 192389825 -58298029 + (TA)n Simple_repeat Simple_repeat 1 44 0 1507 252 42 31 chr2 192390556 192391135 -58296719 + L1MD2 LINE L1 762 1346 -5063 * 5064 262 58 22 chr2 192391114 192393945 -58293909 + L1MD2 LINE L1 3662 6600 -19 1009 226 67 88 chr2 192393954 192394418 -58293436 + L1MD2 LINE L1 5880 6333 -26 794 183 17 29 chr2 192395393 192395602 -58292252 + AluJb SINE Alu 140 346 0 1626 228 97 18 chr2 192395604 192396047 -58291807 + MER92C LTR ERV1 65 542 -12 21 36 0 0 chr2 192396137 192396165 -58291689 + AT_rich Low_complexity Low_complexity 1 28 0 296 131 28 75 chr2 192396258 192396365 -58291489 - L1MA7 LINE L1 -1 6290 6189 230 284 110 18 chr2 192397083 192397192 -58290662 + L2 LINE L2 2560 2678 -636 228 341 126 28 chr2 192397349 192397563 -58290291 + L2 LINE L2 2826 3060 -253 392 304 101 92 chr2 192398581 192399035 -58288819 + L1ME LINE L1 653 1110 -5095 736 167 0 16 chr2 192399060 192399186 -58288668 + Tigger4(Zombi) DNA MER2_type 2608 2731 0 249 268 41 49 chr2 192399186 192399238 -58288616 + L1ME LINE L1 1571 1622 -4774 2418 111 31 0 chr2 192399238 192399591 -58288263 + THE1B LTR MaLR 1 364 0 249 268 41 49 chr2 192399591 192399661 -58288193 + L1ME LINE L1 1622 1692 -4704 1349 294 73 47 chr2 192401361 192402173 -58285681 - L2 LINE L2 -437 2877 2045 758 184 32 22 chr2 192403378 192403563 -58284291 + MER53 DNA DNA 1 187 -2 21 0 0 0 chr2 192403940 192403961 -58283893 + AT_rich Low_complexity Low_complexity 1 21 0 2078 95 4 0 chr2 192403998 192404271 -58283583 - AluSx SINE Alu -38 274 1 21 0 0 0 chr2 192406076 192406097 -58281757 + AT_rich Low_complexity Low_complexity 1 21 0 412 272 20 0 chr2 192406757 192406904 -58280950 + L1ME LINE L1 4576 4725 -1490 10199 211 26 13 chr2 192406917 192409169 -58278685 + L1PA15 LINE L1 2 2278 -4509 921 218 26 0 chr2 192409236 192409429 -58278425 + L1PA15 LINE L1 2862 3059 -3738 1241 114 51 27 chr2 192409429 192409740 -58278114 - THE1C LTR MaLR 0 375 7 12624 201 9 0 chr2 192409740 192413508 -58274346 + L1PA15 LINE L1 3050 6810 -6 881 228 72 22 chr2 192413690 192414187 -58273667 + L1ME LINE L1 5119 5638 -595 1033 276 56 23 chr2 192414207 192414801 -58273053 - L1M1 LINE L1 -4228 3518 2834 1284 198 88 4 chr2 192414817 192414935 -58272919 + AluJb SINE Alu 2 109 -203 239 71 24 0 chr2 192414935 192414977 -58272877 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1284 198 88 4 chr2 192414977 192415131 -58272723 + AluJb SINE Alu 109 297 -15 364 174 71 71 chr2 192415133 192415288 -58272566 - L1MCa LINE L1 -4996 1430 1276 190 262 0 16 chr2 192415626 192415687 -58272167 + MIR SINE MIR 66 125 -137 364 355 57 9 chr2 192415979 192416190 -58271664 + MIR SINE MIR 27 247 -15 2078 127 10 0 chr2 192416684 192416813 -58271041 + AluSx SINE Alu 1 127 -185 2529 58 6 0 chr2 192416813 192417124 -58270730 + AluSp SINE Alu 1 313 0 2078 127 10 0 chr2 192417124 192417302 -58270552 + AluSx SINE Alu 127 311 -1 197 143 48 0 chr2 192417359 192417401 -58270453 + GA-rich Low_complexity Low_complexity 3 46 0 359 268 100 73 chr2 192418376 192418596 -58269258 - Charlie8 DNA MER1_type -2185 232 7 21 36 0 0 chr2 192419223 192419251 -58268603 + AT_rich Low_complexity Low_complexity 1 28 0 2281 87 6 6 chr2 192419602 192419913 -58267941 - AluY SINE Alu 0 311 1 33 0 0 0 chr2 192419920 192419953 -58267901 + AT_rich Low_complexity Low_complexity 1 33 0 335 328 93 5 chr2 192421078 192421282 -58266572 - L3b LINE CR1 -258 1325 1104 606 276 8 82 chr2 192421789 192422032 -58265822 - MIR SINE MIR 0 262 38 1804 133 57 38 chr2 192424329 192424697 -58263157 - THE1C LTR MaLR 0 375 1 2456 49 10 3 chr2 192424828 192425132 -58262722 - AluY SINE Alu -5 306 1 369 188 0 35 chr2 192425561 192425646 -58262208 + Tigger1 DNA MER2_type 74 155 -2263 * 3729 142 16 25 chr2 192425643 192426160 -58261694 + Tigger1 DNA MER2_type 1785 2296 -122 2653 39 0 3 chr2 192426160 192426468 -58261386 - AluY SINE Alu -4 307 1 3729 142 16 25 chr2 192426468 192426590 -58261264 + Tigger1 DNA MER2_type 2296 2418 0 8527 61 109 6 chr2 192428059 192429255 -58258599 + L1P LINE L1 56 1374 -4772 724 192 20 27 chr2 192429470 192429616 -58258238 + Tigger7 DNA MER2_type 10 154 -2333 4688 130 31 16 chr2 192429617 192430385 -58257469 + LTR17 LTR ERV1 1 780 0 6292 104 1 16 chr2 192430489 192431434 -58256420 + HERVH LTR ERV1 2062 2992 -4721 975 127 7 0 chr2 192431420 192431570 -58256284 + HERVH LTR ERV1 3140 3290 -4423 * 5358 114 18 6 chr2 192431560 192432862 -58254992 + HERVH LTR ERV1 3492 5088 -2003 717 196 14 7 chr2 192433000 192433148 -58254706 - MER67D LTR ERV1 -359 155 7 31 26 0 0 chr2 192433292 192433330 -58254524 + AT_rich Low_complexity Low_complexity 1 38 0 271 267 9 38 chr2 192437140 192437245 -58250609 + CT-rich Low_complexity Low_complexity 5 106 0 23 0 0 0 chr2 192439236 192439259 -58248595 + AT_rich Low_complexity Low_complexity 1 23 0 1437 198 58 92 chr2 192439267 192439746 -58248108 - MLT1C LTR MaLR -4 463 1 2620 104 3 8 chr2 192439840 192440206 -58247648 + THE1B LTR MaLR 1 364 0 1263 251 73 7 chr2 192440740 192441263 -58246591 + MLT2F LTR ERVL 3 604 -59 1041 194 41 16 chr2 192441266 192441508 -58246346 - L1MB8 LINE L1 -183 5995 5748 1241 204 118 59 chr2 192441509 192441751 -58246103 - L1MB8 LINE L1 -1224 4922 4696 2119 128 0 3 chr2 192441751 192442049 -58245805 + AluSx SINE Alu 1 297 -15 1241 204 118 59 chr2 192442049 192442263 -58245591 - L1MB8 LINE L1 -1450 4696 4439 7146 90 21 21 chr2 192442391 192443957 -58243897 - HERVH LTR ERV1 -5902 1811 1 2692 79 108 5 chr2 192443959 192444365 -58243489 - LTR7 LTR ERV1 -2 448 1 2190 122 0 0 chr2 192444648 192444943 -58242911 + AluSx SINE Alu 1 295 -17 998 292 83 19 chr2 192445160 192445533 -58242321 - MLT1J2 LTR MaLR -11 439 43 249 250 38 0 chr2 192445665 192445745 -58242109 - MER103 DNA DNA -81 85 3 2194 107 3 3 chr2 192448535 192448833 -58239021 - AluSg SINE Alu -12 298 1 244 348 38 32 chr2 192449323 192449481 -58238373 + L2 LINE L2 3155 3313 0 26 0 0 0 chr2 192449588 192449614 -58238240 + AT_rich Low_complexity Low_complexity 1 26 0 367 269 200 8 chr2 192449687 192449817 -58238037 - MER5A DNA MER1_type -1 188 34 2110 97 35 3 chr2 192450067 192450355 -58237499 + AluSx SINE Alu 1 297 -15 612 250 75 0 chr2 192450427 192450587 -58237267 + MER5B DNA MER1_type 2 173 -5 447 234 109 87 chr2 192450818 192451174 -58236680 - LTR43 LTR ERV1 -62 479 180 1370 271 40 44 chr2 192451904 192452498 -58235356 + MER20B DNA MER1_type 147 738 -45 32362 26 0 0 chr2 192452926 192457556 -58230298 + L1PA3 LINE L1 1524 6155 0 182 239 83 128 chr2 192457822 192457931 -58229923 + L2 LINE L2 3162 3265 -48 520 326 3 28 chr2 192458760 192458965 -58228889 + MIR SINE MIR 3 204 -58 288 186 0 0 chr2 192458958 192459017 -58228837 + (TA)n Simple_repeat Simple_repeat 2 60 0 * 308 296 0 0 chr2 192459020 192459108 -58228746 - L1MC4 LINE L1 -1339 6703 6616 25 0 0 0 chr2 192460254 192460279 -58227575 + AT_rich Low_complexity Low_complexity 1 25 0 675 201 6 25 chr2 192461318 192461477 -58226377 + MER63 DNA MER1_type 482 637 -424 22 35 0 0 chr2 192461573 192461602 -58226252 + AT_rich Low_complexity Low_complexity 1 29 0 195 188 0 0 chr2 192462713 192462761 -58225093 + GA-rich Low_complexity Low_complexity 1 48 0 309 74 19 56 chr2 192464357 192464411 -58223443 + L1MC3 LINE L1 6128 6179 -1606 6219 180 46 44 chr2 192464614 192465711 -58222143 + L1MC3 LINE L1 6366 7468 -317 1977 116 32 26 chr2 192465711 192466021 -58221833 + AluSx SINE Alu 1 312 0 6219 180 46 44 chr2 192466021 192466340 -58221514 + L1MC3 LINE L1 7468 7785 0 239 325 13 13 chr2 192468597 192468674 -58219180 - L2 LINE L2 -5 3308 3232 945 229 37 14 chr2 192468699 192468913 -58218941 - MER20B DNA MER1_type 0 219 1 2256 102 13 0 chr2 192469838 192470142 -58217712 - AluSq SINE Alu -5 308 1 963 166 79 151 chr2 192470159 192470576 -58217278 + LTR9B LTR ERV1 258 644 0 224 373 56 16 chr2 192470596 192470722 -58217132 - MIR SINE MIR -125 137 7 2288 71 3 49 chr2 192470765 192471090 -58216764 - AluY SINE Alu -1 310 1 230 143 41 20 chr2 192471350 192471399 -58216455 + LTR49 LTR ERV1 468 517 -78 1741 176 0 20 chr2 192471604 192471900 -58215954 - AluJo SINE Alu -13 299 10 272 350 28 0 chr2 192472843 192472986 -58214868 + MARNA DNA Mariner 271 417 -169 200 303 0 0 chr2 192473480 192473546 -58214308 + (TG)n Simple_repeat Simple_repeat 1 66 0 221 342 0 45 chr2 192474364 192474475 -58213379 + L2 LINE L2 2554 2659 -655 403 336 70 19 chr2 192474577 192474791 -58213063 - MIR SINE MIR -31 231 7 1356 203 135 62 chr2 192474976 192475214 -58212640 - MLT1C LTR MaLR -8 459 240 3539 92 12 0 chr2 192475214 192475705 -58212149 - L1PA10 LINE L1 0 6168 5672 1356 203 135 62 chr2 192475705 192475889 -58211965 - MLT1C LTR MaLR -227 240 6 366 305 99 86 chr2 192476022 192476255 -58211599 + L2 LINE L2 3029 3264 -8 231 260 146 49 chr2 192476308 192476349 -58211505 - MIR SINE MIR -12 250 214 1638 243 110 15 chr2 192476349 192476823 -58211031 - LTR40a LTR ERVL 0 519 1 231 260 146 49 chr2 192476823 192476904 -58210950 - MIR SINE MIR -48 214 116 416 295 0 0 chr2 192477089 192477211 -58210643 + MIR SINE MIR 141 262 0 269 309 78 49 chr2 192477648 192477852 -58210002 - MER112 DNA MER1_type -6 254 45 31 26 0 0 chr2 192477946 192477984 -58209870 + AT_rich Low_complexity Low_complexity 1 38 0 327 141 28 0 chr2 192478902 192478973 -58208881 + L1MA10 LINE L1 6262 6334 0 320 331 78 12 chr2 192479153 192479319 -58208535 - MER5B DNA MER1_type 0 178 2 516 355 92 27 chr2 192480260 192480776 -58207078 + L2 LINE L2 2690 3244 -28 368 306 36 0 chr2 192481281 192481392 -58206462 + MIR SINE MIR 54 168 -94 626 301 41 62 chr2 192482569 192482957 -58204897 - L2 LINE L2 0 3313 2934 1396 215 50 43 chr2 192482978 192483396 -58204458 - MLT1D LTR MaLR -9 496 76 265 213 175 0 chr2 192483416 192483496 -58204358 - L1M4 LINE L1 -6433 109 16 282 273 40 47 chr2 192483497 192483647 -58204207 - L2 LINE L2 -615 2699 2551 21 0 0 0 chr2 192484271 192484292 -58203562 + AT_rich Low_complexity Low_complexity 1 21 0 186 118 0 0 chr2 192485613 192485647 -58202207 + (TC)n Simple_repeat Simple_repeat 1 34 0 288 0 0 0 chr2 192485647 192485679 -58202175 + (TG)n Simple_repeat Simple_repeat 1 32 0 21 71 0 0 chr2 192485819 192485861 -58201993 + AT_rich Low_complexity Low_complexity 1 42 0 236 330 11 11 chr2 192485959 192486047 -58201807 - MIR SINE MIR -63 145 58 246 336 36 64 chr2 192487471 192487611 -58200243 + L2 LINE L2 3178 3313 0 300 53 0 0 chr2 192488880 192488918 -58198936 + (ATG)n Simple_repeat Simple_repeat 2 39 0 277 378 79 48 chr2 192489689 192490083 -58197771 - L2 LINE L2 -353 2961 2556 210 71 0 0 chr2 192490611 192490639 -58197215 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 2156 127 3 0 chr2 192490778 192491085 -58196769 - AluSx SINE Alu -4 308 1 29 90 0 0 chr2 192491328 192491406 -58196448 + AT_rich Low_complexity Low_complexity 1 78 0 217 187 28 19 chr2 192491455 192491562 -58196292 + (TA)n Simple_repeat Simple_repeat 1 108 0 700 41 0 31 chr2 192491729 192491827 -58196027 - L1PA2 LINE L1 -1 6154 6060 2385 64 0 0 chr2 192492498 192492793 -58195061 - AluY SINE Alu -16 295 1 2355 92 3 0 chr2 192492888 192493194 -58194660 - AluSg SINE Alu -1 309 3 2052 210 74 15 chr2 192493196 192493734 -58194120 - L1MD2 LINE L1 0 6359 5790 1249 243 58 60 chr2 192493735 192494302 -58193552 - L1MD2 LINE L1 -1417 4729 4164 185 0 40 0 chr2 192494581 192494606 -58193248 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1911 118 14 7 chr2 192495662 192495950 -58191904 - AluSg SINE Alu -20 290 1 225 300 0 0 chr2 192498265 192498325 -58189529 - MLT1J LTR MaLR -340 171 112 864 251 109 5 chr2 192499191 192499586 -58188268 + L1M4 LINE L1 3141 3576 -2570 * 1333 192 22 10 chr2 192499581 192499893 -58187961 - L1MA9 LINE L1 -743 5403 5088 2656 199 56 18 chr2 192499905 192500527 -58187327 + L1MA9 LINE L1 5434 6079 -233 547 186 0 0 chr2 192500532 192500634 -58187220 + L1MA9 LINE L1 6187 6288 -24 4243 111 7 26 chr2 192501483 192502170 -58185684 - HERVH LTR ERV1 -6239 1474 801 1137 201 28 9 chr2 192502252 192502657 -58185197 - HERVH LTR ERV1 -7267 446 1 413 91 0 0 chr2 192502657 192502712 -58185142 - LTR7 LTR ERV1 0 450 396 547 82 0 0 chr2 192502713 192502786 -58185068 - Alu SINE Alu -16 295 223 1504 101 122 28 chr2 192502788 192503112 -58184742 - LTR7 LTR ERV1 -48 402 1 24 96 0 0 chr2 192503292 192503365 -58184489 + AT_rich Low_complexity Low_complexity 1 73 0 1401 239 43 51 chr2 192504135 192504604 -58183250 - MLT1C LTR MaLR 0 467 3 456 291 17 8 chr2 192504976 192505093 -58182761 - MER5A DNA MER1_type -1 188 71 241 268 0 28 chr2 192505094 192505165 -58182689 - LTR33A LTR ERVL 0 523 455 2065 88 3 10 chr2 192505450 192505755 -58182099 - LTR7 LTR ERV1 -2 448 146 2154 122 48 13 chr2 192505874 192506252 -58181602 - HERVH LTR ERV1 -1 7712 7322 1403 125 19 0 chr2 192506250 192506466 -58181388 - HERVH LTR ERV1 -1894 5819 5600 * 1864 167 0 0 chr2 192506470 192506770 -58181084 - HERVH LTR ERV1 -2567 5146 4847 1442 207 10 24 chr2 192506922 192507217 -58180637 - AluJb SINE Alu -19 293 3 576 204 19 25 chr2 192507227 192507384 -58180470 - L1M4 LINE L1 -1712 4434 4279 978 250 44 0 chr2 192507389 192507709 -58180145 - L1M4 LINE L1 -2852 3294 2961 2096 94 10 30 chr2 192507709 192508008 -58179846 - AluSg SINE Alu -17 293 1 200 222 0 0 chr2 192508101 192508137 -58179717 + (CATA)n Simple_repeat Simple_repeat 4 39 0 189 74 0 0 chr2 192508198 192508225 -58179629 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 2358 124 5 16 chr2 192509547 192509926 -58177928 - THE1C LTR MaLR 0 375 1 1728 139 3 100 chr2 192510043 192510402 -58177452 - MER4A LTR ERV1 0 664 341 516 110 88 11 chr2 192510418 192510509 -58177345 - MER4A LTR ERV1 -566 98 1 878 181 30 0 chr2 192511116 192511282 -58176572 + FAM SINE Alu 1 171 -4 336 328 45 22 chr2 192511712 192511846 -58176008 - MIR3 SINE MIR -58 150 14 873 300 91 61 chr2 192512049 192512543 -58175311 + L2 LINE L2 2805 3313 0 217 308 106 19 chr2 192513058 192513162 -58174692 + L2 LINE L2 3159 3271 -1 435 225 11 0 chr2 192513316 192513405 -58174449 + Tigger1 DNA MER2_type 2328 2417 -1 * 805 136 111 1 chr2 192513405 192513595 -58174259 - MER44D DNA MER2_type -101 508 1 288 325 32 39 chr2 192514435 192514589 -58173265 - MIR SINE MIR -10 252 100 1689 169 10 3 chr2 192514671 192514967 -58172887 + AluJb SINE Alu 2 299 -13 318 322 17 25 chr2 192516697 192516815 -58171039 + L2 LINE L2 2847 2963 -309 423 285 78 16 chr2 192516819 192517012 -58170842 - MLT1L LTR MaLR 0 615 411 1676 209 0 9 chr2 192517705 192518020 -58169834 + AluJo SINE Alu 1 312 0 689 168 0 24 chr2 192519297 192519422 -58168432 + FLAM_C SINE Alu 5 126 -17 279 221 63 11 chr2 192519816 192519911 -58167943 - MER91C DNA MER1_type -40 100 1 1922 119 41 3 chr2 192520012 192520305 -58167549 - AluSx SINE Alu -8 304 1 271 318 83 8 chr2 192520722 192520854 -58167000 + MLT1J LTR MaLR 153 294 -217 303 284 30 30 chr2 192520902 192521036 -58166818 + MLT1J LTR MaLR 378 511 0 371 288 192 49 chr2 192521036 192521380 -58166474 + L2 LINE L2 2217 2609 -705 258 327 50 77 chr2 192521386 192521725 -58166129 + L2 LINE L2 2776 3116 -156 2199 91 0 7 chr2 192521726 192522023 -58165831 - AluSg SINE Alu -15 295 1 2222 109 3 7 chr2 192522973 192523277 -58164577 - AluSx SINE Alu -7 305 3 5341 179 57 32 chr2 192524937 192525461 -58162393 - L1MC1 LINE L1 0 6333 5824 2333 98 3 0 chr2 192525461 192525767 -58162087 - AluSg SINE Alu -2 308 2 5341 179 57 32 chr2 192525767 192526924 -58160930 - L1MC1 LINE L1 -509 5824 4411 246 267 67 13 chr2 192526924 192526999 -58160855 - MER2 DNA MER2_type 0 345 267 886 190 125 22 chr2 192527032 192527216 -58160638 - MER2 DNA MER2_type -142 203 1 2898 247 22 16 chr2 192527237 192528072 -58159782 - L1MC1 LINE L1 -1749 4397 3558 214 283 81 30 chr2 192528995 192529094 -58158760 - MIR SINE MIR 0 262 159 416 220 67 135 chr2 192529094 192529124 -58158730 + LTR9 LTR ERV1 1 31 -613 2113 108 14 7 chr2 192529124 192529420 -58158434 + AluSx SINE Alu 3 300 -12 416 220 67 135 chr2 192529420 192529641 -58158213 + LTR9 LTR ERV1 31 226 -418 354 64 21 0 chr2 192629789 192629836 -58058018 + MLT1B LTR MaLR 338 385 -5 466 321 38 16 chr2 192630764 192630948 -58056906 - MIR SINE MIR -70 192 5 4848 100 140 74 chr2 192631184 192632505 -58055349 - pTR5 LTR ERV1 -1 2437 589 23 0 0 0 chr2 192632730 192632753 -58055101 + AT_rich Low_complexity Low_complexity 1 23 0 4235 228 61 5 chr2 192633915 192635255 -58052599 - L1MC1 LINE L1 -87 6246 4833 3982 178 27 27 chr2 192635551 192636899 -58050955 + L1MA4 LINE L1 4730 6076 -224 2304 146 21 10 chr2 192637001 192637386 -58050468 - L1P3 LINE L1 -5483 392 4 2058 201 45 13 chr2 192637386 192638024 -58049830 - L1M4 LINE L1 -685 5489 4832 9579 130 8 5 chr2 192638599 192640154 -58047700 + L1P LINE L1 3512 5071 -1075 417 263 11 17 chr2 192642319 192642510 -58045344 + L1M4c LINE L1 2372 2561 -3821 300 315 50 45 chr2 192643395 192643579 -58044275 + MIR SINE MIR 9 190 -72 1925 141 7 0 chr2 192643710 192643986 -58043868 - AluSx SINE Alu -33 279 2 215 309 0 15 chr2 192644426 192644494 -58043360 + L2 LINE L2 3234 3300 -13 234 91 0 0 chr2 192644979 192645012 -58042842 + (GA)n Simple_repeat Simple_repeat 2 34 0 2045 99 41 3 chr2 192645311 192645603 -58042251 - AluSx SINE Alu -9 303 1 497 295 29 0 chr2 192645641 192645780 -58042074 - MLT1G1 LTR MaLR -452 143 1 11425 142 5 4 chr2 192645987 192647888 -58039966 - L1P LINE L1 -2649 3497 1595 2845 126 107 154 chr2 192650037 192651062 -58036792 - pTR5 LTR ERV1 0 2438 1274 194 321 21 70 chr2 192651274 192651461 -58036393 - L2 LINE L2 -2153 1161 984 26 64 0 0 chr2 192652615 192652662 -58035192 + AT_rich Low_complexity Low_complexity 1 47 0 296 283 94 24 chr2 192652776 192652953 -58034901 + MIR3 SINE MIR 8 199 -9 377 269 101 73 chr2 192654566 192654963 -58032891 + L1MCc LINE L1 18 425 -5998 308 342 32 6 chr2 192655385 192655543 -58032311 + L1MCc LINE L1 1129 1290 -5133 2764 199 30 16 chr2 192655544 192656237 -58031617 - L1MB8 LINE L1 0 6178 5476 3660 76 47 6 chr2 192656266 192656778 -58031076 - L1PA7 LINE L1 -13 6141 5609 404 278 69 35 chr2 192657189 192657362 -58030492 + MIR SINE MIR 2 180 -82 403 282 65 67 chr2 192659169 192659487 -58028367 + L2 LINE L2 2999 3272 0 2101 239 30 6 chr2 192661494 192662034 -58025820 - L1MB8 LINE L1 -1993 4153 3601 23 0 0 0 chr2 192662036 192662059 -58025795 + AT_rich Low_complexity Low_complexity 1 23 0 271 247 71 12 chr2 192663675 192663760 -58024094 + MIR3 SINE MIR 91 180 -28 367 319 28 0 chr2 192664378 192664517 -58023337 - MER102b DNA MER1_type -3 338 196 559 279 101 10 chr2 192664517 192664725 -58023129 + MLT1J2 LTR MaLR 1 227 -223 2169 171 20 0 chr2 192664847 192665204 -58022650 + THE1B LTR MaLR 1 364 0 25 0 0 0 chr2 192665219 192665244 -58022610 + AT_rich Low_complexity Low_complexity 1 25 0 186 167 0 0 chr2 192665255 192665268 -58022586 + (TA)n Simple_repeat Simple_repeat 1 13 -35 2501 107 85 17 chr2 192665268 192665680 -58022174 + MLT2A1 LTR ERVL 5 444 0 186 167 0 0 chr2 192665680 192665714 -58022140 + (TA)n Simple_repeat Simple_repeat 12 48 0 269 250 15 0 chr2 192666531 192666599 -58021255 + MIR SINE MIR 185 253 -9 230 350 21 31 chr2 192666655 192666752 -58021102 - L3 LINE CR1 -35 1542 1447 194 328 102 31 chr2 192666860 192666988 -58020866 - L2 LINE L2 0 3313 3177 192 308 86 86 chr2 192667224 192667503 -58020351 - L2 LINE L2 -433 2881 2603 211 335 77 16 chr2 192667526 192667720 -58020134 - L3 LINE CR1 -554 1023 818 185 263 0 35 chr2 192667918 192667975 -58019879 + L2 LINE L2 1158 1212 -2102 2198 89 3 0 chr2 192668499 192668792 -58019062 + AluY SINE Alu 1 294 -17 559 145 8 26 chr2 192668830 192668947 -58018907 + L1ME LINE L1 5114 5228 -918 277 167 91 0 chr2 192669196 192669262 -58018592 + L1ME LINE L1 5407 5478 -686 237 294 29 39 chr2 192669971 192670073 -58017781 + L1ME LINE L1 2 102 -5968 993 33 0 8 chr2 192670777 192670897 -58016957 - AluY SINE Alu -15 296 178 1920 151 0 3 chr2 192671128 192671436 -58016418 + AluSp SINE Alu 1 307 0 1368 304 66 23 chr2 192671472 192672120 -58015734 - L1MCc LINE L1 -4926 1497 822 460 309 99 9 chr2 192672344 192672577 -58015277 - L1MCc LINE L1 -5915 508 255 210 282 94 51 chr2 192672782 192672899 -58014955 - MIR SINE MIR -140 122 1 375 284 103 26 chr2 192672985 192673140 -58014714 + Charlie8 DNA MER1_type 99 265 -2152 699 344 83 21 chr2 192674082 192674704 -58013150 - L2 LINE L2 0 3272 2612 1642 259 83 23 chr2 192674709 192675237 -58012617 - MLT1E LTR MaLR 0 593 34 235 348 94 56 chr2 192675253 192675353 -58012501 - L2 LINE L2 -711 2603 2508 1811 179 12 50 chr2 192675353 192675756 -58012098 + MLT1B LTR MaLR 3 390 0 235 348 94 56 chr2 192675756 192675888 -58011966 - L2 LINE L2 -806 2508 2362 330 268 80 0 chr2 192675892 192676004 -58011850 - L2 LINE L2 -1 3312 3192 251 150 0 0 chr2 192676054 192676094 -58011760 - MLT2C2 LTR ERVL 0 464 425 421 46 15 15 chr2 192676094 192676159 -58011695 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 293 340 52 14 chr2 192676175 192676463 -58011391 - L2 LINE L2 -1294 2020 1722 577 276 176 9 chr2 192676625 192676846 -58011008 + MIR SINE MIR 2 259 -3 228 346 46 39 chr2 192676843 192677123 -58010731 - L2 LINE L2 -1894 1420 1139 * 316 317 25 0 chr2 192677625 192677745 -58010109 + L3b LINE CR1 1249 1371 -212 22 35 0 0 chr2 192678204 192678233 -58009621 + AT_rich Low_complexity Low_complexity 1 29 0 385 339 9 0 chr2 192678303 192678415 -58009439 - MIR3 SINE MIR -9 199 87 534 250 96 32 chr2 192678986 192679174 -58008680 + MIR SINE MIR 6 205 -57 25 51 0 0 chr2 192680752 192680791 -58007063 + AT_rich Low_complexity Low_complexity 1 39 0 227 122 0 0 chr2 192680791 192680832 -58007022 - AluSx SINE Alu 0 308 268 1300 135 0 5 chr2 192680835 192681020 -58006834 - AluSx SINE Alu -128 184 1 29 0 0 0 chr2 192681308 192681337 -58006517 + AT_rich Low_complexity Low_complexity 1 29 0 189 171 0 0 chr2 192681383 192681418 -58006436 + (TA)n Simple_repeat Simple_repeat 1 35 0 29 47 0 0 chr2 192681533 192681576 -58006278 + AT_rich Low_complexity Low_complexity 1 43 0 1746 143 8 0 chr2 192682160 192682412 -58005442 - AluSx SINE Alu -58 254 1 330 286 0 23 chr2 192682414 192682547 -58005307 + L1MA4 LINE L1 5255 5384 -2424 10845 102 7 5 chr2 192682622 192682645 -58005209 - L1P3 LINE L1 -4956 1505 1484 3648 88 8 4 chr2 192682645 192683144 -58004710 - L1PA7 LINE L1 0 6154 5654 10845 102 7 5 chr2 192683144 192684621 -58003233 - L1P3 LINE L1 -4977 1484 1 5080 250 43 56 chr2 192684625 192684665 -58003189 - L1 LINE L1 -3108 4059 4020 2002 158 0 3 chr2 192684665 192684976 -58002878 - AluSx SINE Alu -2 310 1 5080 250 43 56 chr2 192684976 192685326 -58002528 - L1 LINE L1 -3147 4020 3667 1663 192 22 49 chr2 192685326 192685733 -58002121 + MSTD LTR MaLR 1 396 0 5080 250 43 56 chr2 192685733 192688889 -57998965 - L1 LINE L1 -3500 3667 853 290 258 139 31 chr2 192689027 192689221 -57998633 - MLT1F1 LTR MaLR 0 567 353 267 231 77 55 chr2 192689287 192689378 -57998476 - MLT1E LTR MaLR -461 132 40 292 233 158 14 chr2 192689512 192689658 -57998196 - L2 LINE L2 -220 3052 2886 230 267 124 19 chr2 192689905 192690010 -57997844 + L2 LINE L2 3180 3295 -18 2053 79 79 7 chr2 192690070 192690350 -57997504 - AluSx SINE Alu -12 300 1 1028 198 11 0 chr2 192690852 192691039 -57996815 + MLT1D LTR MaLR 317 505 0 241 103 26 0 chr2 192691958 192691997 -57995857 - L1 LINE L1 -2218 3928 3889 630 194 6 63 chr2 192692097 192692234 -57995620 + L1MA4 LINE L1 6120 6246 -54 2154 112 0 3 chr2 192692234 192692529 -57995325 + AluSg SINE Alu 1 294 -16 630 194 6 63 chr2 192692529 192692566 -57995288 + L1MA4 LINE L1 6246 6284 -16 388 257 97 0 chr2 192692590 192692703 -57995151 + L2 LINE L2 1810 1933 -1381 701 297 109 10 chr2 192692741 192693034 -57994820 + L2 LINE L2 1705 2026 -1288 306 299 13 0 chr2 192693044 192693121 -57994733 - MER2 DNA MER2_type -1 344 267 1003 219 75 41 chr2 192693237 192693676 -57994178 - L1 LINE L1 -2597 3549 3096 770 183 143 18 chr2 192693875 192694154 -57993700 - MSTA LTR MaLR -114 314 1 1316 267 77 0 chr2 192694159 192694589 -57993265 - L1MCb LINE L1 -4966 1079 617 1566 300 42 6 chr2 192694782 192695309 -57992545 - L1MCb LINE L1 -5499 546 1 552 250 153 67 chr2 192695441 192695498 -57992356 - L1M4 LINE L1 -980 5166 5115 2257 126 3 0 chr2 192695498 192695808 -57992046 - AluSp SINE Alu 0 313 3 552 250 153 67 chr2 192695808 192696233 -57991621 - L1M4 LINE L1 -1031 5115 4604 680 214 109 57 chr2 192696233 192696443 -57991411 - MER58A DNA MER1_type -3 221 1 552 250 153 67 chr2 192696443 192696651 -57991203 - L1M4 LINE L1 -1542 4604 4415 2201 132 31 14 chr2 192696818 192697174 -57990680 - THE1B LTR MaLR -2 362 1 10907 102 7 34 chr2 192697174 192698796 -57989058 - THE1B-int LTR MaLR 0 1580 2 500 239 139 28 chr2 192698882 192699062 -57988792 - MER3 DNA MER1_type 0 209 10 1059 270 69 18 chr2 192699378 192699929 -57987925 - L1M4 LINE L1 -2933 3213 2635 16833 32 1 1 chr2 192700232 192702291 -57985563 - L1P LINE L1 -2333 3813 1755 7816 14 0 1 chr2 192702292 192703217 -57984637 + L1PA2 LINE L1 5230 6153 -2 25 65 0 0 chr2 192703245 192703291 -57984563 + AT_rich Low_complexity Low_complexity 1 46 0 215 103 26 0 chr2 192704343 192704382 -57983472 + (TA)n Simple_repeat Simple_repeat 2 41 0 186 276 52 0 chr2 192705259 192705317 -57982537 + MIR SINE MIR 121 181 -81 1180 278 51 14 chr2 192705336 192705771 -57982083 + L1ME LINE L1 3856 4306 -1840 1158 207 91 112 chr2 192705763 192706331 -57981523 + L1ME LINE L1 4520 5071 -1075 * 2013 73 0 8 chr2 192706331 192706591 -57981263 + AluY SINE Alu 37 294 -17 1158 207 91 112 chr2 192706591 192706746 -57981108 + L1ME LINE L1 5071 5228 -918 296 152 91 0 chr2 192706995 192707061 -57980793 + L1ME LINE L1 5407 5478 -692 2415 121 59 5 chr2 192708249 192708671 -57979183 + LTR56 LTR ERV1 1 445 0 226 212 0 61 chr2 192708922 192708988 -57978866 - HAL1 LINE L1 -190 2317 2256 39 50 0 0 chr2 192710538 192710598 -57977256 + AT_rich Low_complexity Low_complexity 1 60 0 216 0 0 0 chr2 192710611 192710635 -57977219 + (TA)n Simple_repeat Simple_repeat 2 25 0 21 36 0 0 chr2 192711306 192711334 -57976520 + AT_rich Low_complexity Low_complexity 1 28 0 2359 201 34 4 chr2 192711419 192711921 -57975933 - L1MB5 LINE L1 0 6174 5658 1303 211 14 18 chr2 192712934 192713218 -57974636 + AluJb SINE Alu 4 286 -26 261 0 0 0 chr2 192713231 192713260 -57974594 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 45 45 0 0 chr2 192713691 192713757 -57974097 + AT_rich Low_complexity Low_complexity 1 66 0 494 280 9 0 chr2 192716789 192716896 -57970958 - LTR67 LTR ERVL -341 216 109 1964 97 4 0 chr2 192717701 192717969 -57969885 - AluSc SINE Alu 0 309 41 297 378 78 10 chr2 192718054 192718348 -57969506 - ERVL LTR ERVL -863 4901 4588 350 345 100 33 chr2 192718373 192718703 -57969151 - ERVL LTR ERVL -1180 4474 4123 521 340 87 24 chr2 192719039 192719374 -57968480 - ERVL LTR ERVL -2038 3726 3371 1013 118 29 35 chr2 192719390 192719560 -57968294 - L1MC1 LINE L1 0 6333 6165 2718 13 0 0 chr2 192719641 192719946 -57967908 - AluYa5 SINE Alu -6 305 1 1551 92 31 0 chr2 192719946 192720175 -57967679 - L1PA10 LINE L1 -12 6156 5921 817 182 26 0 chr2 192720175 192720329 -57967525 - L1MC1 LINE L1 -180 6153 5996 672 230 82 59 chr2 192720494 192720836 -57967018 - L1MC5 LINE L1 -210 7751 7397 969 204 147 34 chr2 192720836 192721101 -57966753 - AluJo SINE Alu -6 296 2 672 230 82 59 chr2 192721101 192721162 -57966692 - L1MC5 LINE L1 -564 7397 7339 1181 204 89 26 chr2 192721206 192721554 -57966300 + L1MC4 LINE L1 7549 7918 -124 699 235 44 0 chr2 192721586 192721722 -57966132 + Tigger3(Golem) DNA MER2_type 1 142 -2887 * 1577 167 4 0 chr2 192721719 192721976 -57965878 + Tigger3(Golem) DNA MER2_type 2781 3038 0 623 154 32 8 chr2 192722029 192722152 -57965702 + L1MC4 LINE L1 7916 8041 -1 300 285 58 41 chr2 192722181 192722353 -57965501 - L1MC4 LINE L1 -549 7493 7319 941 246 38 108 chr2 192722377 192722936 -57964918 - L1MC5 LINE L1 -735 7226 6718 1514 284 102 25 chr2 192722936 192722989 -57964865 - MLT1E LTR MaLR 0 593 545 306 0 0 0 chr2 192722989 192723023 -57964831 + (CA)n Simple_repeat Simple_repeat 2 35 0 1514 284 102 25 chr2 192723023 192723519 -57964335 - MLT1E LTR MaLR -48 545 2 941 246 38 108 chr2 192723519 192723618 -57964236 - L1MC5 LINE L1 -1243 6718 6614 22 35 0 0 chr2 192723718 192723747 -57964107 + AT_rich Low_complexity Low_complexity 1 29 0 219 283 0 0 chr2 192723751 192723804 -57964050 + (TA)n Simple_repeat Simple_repeat 1 53 0 2658 104 59 7 chr2 192723835 192724257 -57963597 - MLT2A1 LTR ERVL 0 444 1 5453 71 17 10 chr2 192724259 192724977 -57962877 - HERVL-A1 LTR ERVL -2 5652 4930 12559 84 2 2 chr2 192724977 192726621 -57961233 - HERVL-A1 LTR ERVL -4010 1644 1 2419 104 90 12 chr2 192726621 192727033 -57960821 - MLT2A1 LTR ERVL 0 444 1 271 126 66 18 chr2 192727055 192727222 -57960632 + (TA)n Simple_repeat Simple_repeat 2 176 0 32 26 0 0 chr2 192727222 192727261 -57960593 + AT_rich Low_complexity Low_complexity 1 39 0 194 0 39 0 chr2 192727614 192727640 -57960214 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 603 74 0 0 chr2 192727648 192727729 -57960125 + (TCCA)n Simple_repeat Simple_repeat 4 84 0 2614 42 0 0 chr2 192728140 192728447 -57959407 - AluY SINE Alu -3 308 2 486 260 175 35 chr2 192728732 192729332 -57958522 - L1MC5 LINE L1 -54 7907 7224 314 299 59 54 chr2 192729413 192729617 -57958237 - L1MC5 LINE L1 -727 7234 7030 410 290 14 10 chr2 192729675 192729814 -57958040 - L1MC5 LINE L1 -1112 6883 6698 198 265 0 0 chr2 192729923 192729991 -57957863 + (TA)n Simple_repeat Simple_repeat 1 68 0 584 300 86 26 chr2 192730826 192731059 -57956795 - MIR SINE MIR -11 251 5 370 339 96 0 chr2 192731315 192731430 -57956424 - L2 LINE L2 0 3272 3147 268 232 18 0 chr2 192731477 192731533 -57956321 - L2 LINE L2 -6 3307 3251 217 269 0 0 chr2 192731618 192731670 -57956184 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 26 0 0 0 chr2 192733220 192733246 -57954608 + AT_rich Low_complexity Low_complexity 1 26 0 1992 109 0 7 chr2 192733680 192734004 -57953850 + AluSx SINE Alu 11 332 0 195 42 0 0 chr2 192734034 192734058 -57953796 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1961 113 3 7 chr2 192734130 192734457 -57953397 - AluSg SINE Alu 0 326 1 24 67 0 0 chr2 192734668 192734713 -57953141 + AT_rich Low_complexity Low_complexity 1 45 0 779 270 108 18 chr2 192735057 192735509 -57952345 - L1M4 LINE L1 -769 5377 4885 693 255 32 25 chr2 192735515 192735793 -57952061 - L1M4 LINE L1 -1422 4724 4445 2378 84 3 0 chr2 192735806 192736105 -57951749 - AluSp SINE Alu -13 300 1 534 165 0 26 chr2 192736151 192736266 -57951588 - LTR41 LTR ERVL -661 112 1 556 277 95 18 chr2 192736268 192736542 -57951312 + L1M4 LINE L1 4102 4396 -1750 340 230 23 0 chr2 192736699 192736786 -57951068 + MLT1G LTR MaLR 497 585 -5 616 251 148 15 chr2 192736815 192737213 -57950641 - L1M4 LINE L1 -3235 2911 2461 232 173 0 0 chr2 192739183 192739235 -57948619 + L1MC4 LINE L1 6652 6703 -1339 248 235 59 0 chr2 192739261 192739346 -57948508 + L1MC4 LINE L1 6614 6703 -1339 255 194 20 33 chr2 192739358 192739449 -57948405 + L1MC4 LINE L1 2006 6983 -1339 196 348 6 105 chr2 192740323 192740504 -57947350 - MIR3 SINE MIR -6 202 40 243 0 0 0 chr2 192740953 192740980 -57946874 + (CA)n Simple_repeat Simple_repeat 2 28 0 515 108 0 9 chr2 192743464 192743568 -57944286 - L1PA11 LINE L1 -88 6080 5981 394 65 0 104 chr2 192743569 192743646 -57944208 + L1PA11 LINE L1 6106 6174 0 2137 78 7 14 chr2 192744884 192745209 -57942645 + AluSp SINE Alu 1 323 0 22 0 0 0 chr2 192745569 192745591 -57942263 + AT_rich Low_complexity Low_complexity 1 22 0 271 250 15 0 chr2 192746700 192746768 -57941086 + MIR SINE MIR 185 253 -9 233 350 21 31 chr2 192746824 192746921 -57940933 - L3 LINE CR1 -35 1542 1447 196 328 102 31 chr2 192747029 192747157 -57940697 - L2 LINE L2 0 3313 3177 227 335 77 16 chr2 192747695 192747889 -57939965 - L3 LINE CR1 -554 1023 818 211 268 0 18 chr2 192748087 192748143 -57939711 + L2 LINE L2 1158 1212 -2102 2272 68 0 0 chr2 192748666 192748947 -57938907 + AluY SINE Alu 1 281 -30 33 0 0 0 chr2 192748960 192748993 -57938861 + AT_rich Low_complexity Low_complexity 1 33 0 1979 114 0 31 chr2 192749379 192749669 -57938185 + AluSx SINE Alu 27 307 -5 22 35 0 0 chr2 192750902 192750931 -57936923 + AT_rich Low_complexity Low_complexity 1 29 0 2251 59 10 0 chr2 192751354 192751642 -57936212 - AluY SINE Alu -20 291 1 989 223 21 90 chr2 192751896 192752272 -57935582 + L1M4 LINE L1 2683 3032 -3114 1148 242 94 55 chr2 192752282 192752720 -57935134 - MLT1D LTR MaLR -27 478 24 1339 182 58 16 chr2 192752738 192753046 -57934808 + L1MB8 LINE L1 5846 6166 -12 1189 205 62 4 chr2 192753157 192753401 -57934453 + AluJo SINE Alu 3 260 -52 2106 99 7 3 chr2 192753545 192753839 -57934015 + AluSq SINE Alu 4 298 -15 425 219 164 0 chr2 192753849 192753995 -57933859 - L1MD1 LINE L1 -4 6238 6069 2569 250 55 16 chr2 192754006 192754819 -57933035 - L1MDa LINE L1 -2790 3750 2895 252 0 0 0 chr2 192754819 192754847 -57933007 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2569 250 55 16 chr2 192754847 192754953 -57932901 - L1MDa LINE L1 -3645 2895 2795 1773 182 39 9 chr2 192754954 192755289 -57932565 + MER2 DNA MER2_type 1 345 0 2096 203 57 24 chr2 192755292 192755342 -57932512 - L1MDa LINE L1 -3748 2792 2745 1592 209 48 0 chr2 192755342 192755673 -57932181 - MER7A DNA MER2_type 0 346 2 2096 203 57 24 chr2 192755673 192756322 -57931532 - L1MDa LINE L1 -3795 2745 2073 692 374 50 24 chr2 192756380 192757006 -57930848 - HERV16 LTR ERVL -1938 3058 2543 433 344 13 0 chr2 192757272 192757429 -57930425 - HERV16 LTR ERVL -3421 2233 2075 310 347 77 61 chr2 192757678 192757874 -57929980 + L2 LINE L2 2903 3101 -171 21 0 0 0 chr2 192758363 192758384 -57929470 + AT_rich Low_complexity Low_complexity 1 21 0 2901 57 29 0 chr2 192758890 192759274 -57928580 + L1P LINE L1 4797 5191 -955 1681 114 70 0 chr2 192759274 192759537 -57928317 + L1PA10 LINE L1 5868 6157 -11 198 103 0 0 chr2 192759557 192759586 -57928268 + (A)n Simple_repeat Simple_repeat 1 29 0 7183 46 6 2 chr2 192759587 192760558 -57927296 + L1PA5 LINE L1 5176 6149 -5 180 361 66 24 chr2 192762982 192763148 -57924706 - L2 LINE L2 -505 2809 2637 184 273 109 0 chr2 192764594 192764649 -57923205 - L2 LINE L2 -1867 1447 1387 648 234 62 26 chr2 192765744 192765936 -57921918 - MIR SINE MIR -62 200 2 24 67 0 0 chr2 192766978 192767023 -57920831 + AT_rich Low_complexity Low_complexity 1 45 0 1472 284 71 69 chr2 192768254 192768602 -57919252 - L1MCc LINE L1 -4562 2560 2214 395 92 15 0 chr2 192768602 192768667 -57919187 + (TA)n Simple_repeat Simple_repeat 2 67 0 1472 284 71 69 chr2 192768667 192769167 -57918687 - L1MCc LINE L1 -4908 2214 1716 2171 106 3 0 chr2 192769167 192769473 -57918381 + AluSp SINE Alu 1 307 0 1472 284 71 69 chr2 192769473 192770159 -57917695 - L1MCc LINE L1 -5406 1716 822 616 306 74 44 chr2 192770384 192770789 -57917065 - L1MCc LINE L1 -5915 508 92 1208 303 3 9 chr2 192770805 192771122 -57916732 + L1P4 LINE L1 1 315 -6472 * 9107 212 31 36 chr2 192771120 192773706 -57914148 + L1P4 LINE L1 3564 6133 -683 22 56 0 0 chr2 192773712 192773748 -57914106 + AT_rich Low_complexity Low_complexity 1 36 0 715 310 110 21 chr2 192774609 192775035 -57912819 + L1MC4a LINE L1 5297 5760 -2048 2214 108 0 0 chr2 192775116 192775423 -57912431 - AluSg SINE Alu -3 307 1 295 326 14 0 chr2 192775432 192775570 -57912284 + L1MC4a LINE L1 5787 5926 -1882 21 0 0 0 chr2 192776000 192776021 -57911833 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr2 192776547 192776592 -57911262 + AT_rich Low_complexity Low_complexity 1 45 0 2542 204 31 5 chr2 192777228 192777817 -57910037 + L1MB8 LINE L1 5575 6178 0 1415 182 36 86 chr2 192778183 192778567 -57909287 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr2 192778700 192778722 -57909132 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr2 192779311 192779341 -57908513 + AT_rich Low_complexity Low_complexity 1 30 0 27 29 0 0 chr2 192779560 192779594 -57908260 + AT_rich Low_complexity Low_complexity 1 34 0 451 150 0 53 chr2 192781393 192781506 -57906348 + AluJb SINE Alu 202 308 -4 1120 162 27 18 chr2 192783489 192783711 -57904143 - L1PA16 LINE L1 -1 6165 5942 372 295 55 28 chr2 192783861 192784115 -57903739 - L1MEd LINE L1 -4862 1257 997 28 79 0 0 chr2 192784245 192784308 -57903546 + AT_rich Low_complexity Low_complexity 1 63 0 280 267 25 58 chr2 192784523 192784643 -57903211 + MLT1H LTR MaLR 59 174 -375 4208 52 9 6 chr2 192784670 192785211 -57902643 - L1PA7 LINE L1 -3 6151 5609 822 259 102 57 chr2 192786238 192786417 -57901437 - LTR16B LTR ERVL -4 460 291 6678 61 11 9 chr2 192786417 192787677 -57900177 + L1PA7 LINE L1 4888 6139 -15 822 259 102 57 chr2 192787677 192787937 -57899917 - LTR16B LTR ERVL -173 291 1 435 338 32 14 chr2 192788032 192788251 -57899603 - HsTC2 DNA Tc2 -1036 862 640 786 290 51 49 chr2 192789050 192789561 -57898293 - L1M4 LINE L1 -2031 4115 3604 373 278 75 12 chr2 192789548 192789803 -57898051 - L1M4 LINE L1 -2841 3305 3035 * 28 0 0 0 chr2 192789810 192789838 -57898016 + AT_rich Low_complexity Low_complexity 1 28 0 1169 219 37 0 chr2 192789863 192790105 -57897749 + L1PA16 LINE L1 5873 6123 -43 377 306 114 41 chr2 192791298 192791517 -57896337 - MIR SINE MIR 0 262 28 448 302 37 60 chr2 192792368 192792583 -57895271 - MIR SINE MIR 0 262 53 305 239 46 85 chr2 192792696 192792826 -57895028 + MIR3 SINE MIR 3 127 -81 1645 146 205 3 chr2 192794598 192794954 -57892900 + MSTA LTR MaLR 1 428 0 259 292 66 34 chr2 192795018 192795227 -57892627 + L1ME LINE L1 5304 5511 -659 206 273 0 18 chr2 192795765 192795820 -57892034 - L2 LINE L2 -3 3269 3216 1990 116 11 0 chr2 192796475 192796779 -57891075 - AluSg SINE Alu 0 309 3 21 0 0 0 chr2 192796789 192796810 -57891044 + AT_rich Low_complexity Low_complexity 1 21 0 2193 78 3 10 chr2 192797090 192797386 -57890468 + AluSc SINE Alu 1 294 -15 218 324 0 14 chr2 192797550 192797621 -57890233 + L2 LINE L2 2993 3062 -210 213 319 69 35 chr2 192798168 192798312 -57889542 + L2 LINE L2 3161 3309 -4 539 134 0 10 chr2 192798521 192798618 -57889236 + (GGAA)n Simple_repeat Simple_repeat 4 99 0 216 0 0 0 chr2 192800032 192800056 -57887798 + (TG)n Simple_repeat Simple_repeat 2 25 0 222 335 23 23 chr2 192800075 192800251 -57887603 + (TATATG)n Simple_repeat Simple_repeat 5 180 0 27 29 0 0 chr2 192801006 192801040 -57886814 + AT_rich Low_complexity Low_complexity 1 34 0 180 0 0 0 chr2 192801842 192801862 -57885992 + (TC)n Simple_repeat Simple_repeat 2 21 0 24 100 0 0 chr2 192802265 192802345 -57885509 + AT_rich Low_complexity Low_complexity 1 80 0 4355 164 31 16 chr2 192803487 192804328 -57883526 - L1MA10 LINE L1 -3 6331 5478 330 198 0 0 chr2 192804359 192804417 -57883437 - Alu SINE Alu -248 52 3 613 199 47 2 chr2 192804486 192804652 -57883202 - L1M2 LINE L1 -701 5467 5346 22 35 0 0 chr2 192805120 192805149 -57882705 + AT_rich Low_complexity Low_complexity 1 29 0 193 400 0 55 chr2 192806129 192806274 -57881580 + L2 LINE L2 2914 3050 -222 391 310 35 17 chr2 192806754 192806928 -57880926 - MIR SINE MIR -57 205 29 535 308 66 28 chr2 192807015 192807337 -57880517 - LTR16B LTR ERVL -26 438 33 1964 127 7 0 chr2 192809891 192810183 -57877671 + AluSc SINE Alu 1 294 -15 21 0 0 0 chr2 192810183 192810204 -57877650 + AT_rich Low_complexity Low_complexity 1 21 0 876 213 20 59 chr2 192810616 192810933 -57876921 + L1MC/D LINE L1 1528 1923 -4503 228 194 14 14 chr2 192810964 192811036 -57876818 + (TA)n Simple_repeat Simple_repeat 1 72 0 2515 249 57 28 chr2 192811098 192812044 -57875810 + L1MC/D LINE L1 3805 4778 -1648 1596 179 94 0 chr2 192812051 192812184 -57875670 + MER46B DNA MER2_type 1 60 -2671 7048 21 0 0 chr2 192812184 192813000 -57874854 + L1PA2 LINE L1 5340 6155 0 1596 179 94 0 chr2 192813000 192813196 -57874658 + MER46B DNA MER2_type 60 236 0 2464 230 47 21 chr2 192813196 192813417 -57874437 + L1MC/D LINE L1 4784 4998 -1507 2260 91 0 10 chr2 192813417 192813724 -57874130 - AluY SINE Alu -7 304 1 2464 230 47 21 chr2 192813724 192814455 -57873399 + L1MC/D LINE L1 4998 5761 -744 1784 225 79 7 chr2 192814456 192814913 -57872941 + L1MC3 LINE L1 7273 7762 -23 1374 195 0 0 chr2 192815398 192815670 -57872184 + L1 LINE L1 4976 5247 -1179 1098 112 12 0 chr2 192815701 192815725 -57872129 - L1MA1 LINE L1 0 6302 6280 273 57 0 0 chr2 192815725 192815760 -57872094 + (CA)n Simple_repeat Simple_repeat 2 36 0 1098 112 12 0 chr2 192815760 192815904 -57871950 - L1MA1 LINE L1 -22 6280 6132 1901 18 0 0 chr2 192815919 192816143 -57871711 - L1PA2 LINE L1 0 6155 5932 2182 82 14 104 chr2 192816143 192816558 -57871296 - L1MA1 LINE L1 -178 6124 5747 6728 111 29 13 chr2 192816608 192817639 -57870215 - MER11C LTR ERVK -23 1048 1 5307 134 11 14 chr2 192817651 192819128 -57868726 - L1MA1 LINE L1 -477 5825 4349 5406 132 16 12 chr2 192819167 192820304 -57867550 + L1PA16 LINE L1 5024 6164 -2 2467 111 17 8 chr2 192821194 192821555 -57866299 - THE1B LTR MaLR 0 364 1 679 301 29 22 chr2 192821628 192821904 -57865950 + L2 LINE L2 1776 2053 -1261 595 285 98 84 chr2 192821910 192821969 -57865885 + L2 LINE L2 2454 2511 -803 2953 140 40 31 chr2 192821969 192822319 -57865535 - MER1A DNA MER1_type -2173 527 169 2164 127 3 0 chr2 192822319 192822627 -57865227 + AluSc SINE Alu 1 309 0 2953 140 40 31 chr2 192822627 192822798 -57865056 - MER1A DNA MER1_type -2531 169 1 595 285 98 84 chr2 192822798 192823215 -57864639 + L2 LINE L2 2511 2937 -377 341 309 122 24 chr2 192823594 192823840 -57864014 - HAL1 LINE L1 -2 2505 2236 1628 306 124 50 chr2 192823976 192825513 -57862341 - HAL1 LINE L1 -475 2032 383 271 295 70 8 chr2 192825565 192825694 -57862160 - HAL1 LINE L1 -2239 268 132 22 0 0 0 chr2 192827164 192827186 -57860668 + AT_rich Low_complexity Low_complexity 1 22 0 24 77 0 0 chr2 192827488 192827540 -57860314 + AT_rich Low_complexity Low_complexity 1 52 0 322 260 165 0 chr2 192827927 192828054 -57859800 - L1ME4a LINE L1 -268 5853 5706 484 228 180 21 chr2 192828102 192828291 -57859563 - MIR SINE MIR -40 222 4 192 152 0 0 chr2 192828941 192828974 -57858880 + (CATA)n Simple_repeat Simple_repeat 2 34 0 1383 52 0 0 chr2 192828997 192829169 -57858685 - L1PA7 LINE L1 -1 6153 5982 261 167 133 0 chr2 192829176 192829236 -57858618 - L1ME4a LINE L1 -532 5634 5567 6109 66 20 0 chr2 192829281 192830084 -57857770 - L1PA8 LINE L1 0 6172 5354 3168 91 19 0 chr2 192830084 192830545 -57857309 + L1PA8 LINE L1 4874 5343 -803 23 33 0 0 chr2 192830747 192830777 -57857077 + AT_rich Low_complexity Low_complexity 1 30 0 1093 239 80 20 chr2 192833837 192834288 -57853566 + Charlie4a DNA MER1_type 31 508 0 3294 227 46 11 chr2 192834606 192834889 -57852965 + L1PA13 LINE L1 263 535 -6252 1798 187 132 5 chr2 192834889 192835269 -57852585 + MSTA LTR MaLR 1 428 0 3294 227 46 11 chr2 192835269 192835682 -57852172 + L1PA13 LINE L1 535 983 -5804 * 14364 196 88 19 chr2 192835651 192838301 -57849553 + L1PA13 LINE L1 1398 3864 -2933 1891 146 0 0 chr2 192838301 192838581 -57849273 + AluSx SINE Alu 15 294 -18 14364 196 88 19 chr2 192838581 192838724 -57849130 + L1PA13 LINE L1 3864 3996 -2801 1957 114 38 3 chr2 192838724 192839013 -57848841 + AluSg SINE Alu 1 299 -11 14364 196 88 19 chr2 192839013 192840312 -57847542 + L1PA13 LINE L1 3996 5840 -957 5934 93 24 1 chr2 192840314 192841400 -57846454 + L1PA13 LINE L1 5051 6152 -11 935 258 19 8 chr2 192842021 192842277 -57845577 - LTR16B LTR ERVL 0 464 206 687 290 13 0 chr2 192842822 192843046 -57844808 - L1 LINE L1 -3372 2774 2548 * 9990 205 20 11 chr2 192843045 192846346 -57841508 + L1PA16 LINE L1 2823 6156 -10 7983 41 6 0 chr2 192846347 192847721 -57840133 - L1PA5 LINE L1 -383 5771 4393 3127 36 8 0 chr2 192847722 192848107 -57839747 + L1PA5 LINE L1 5766 6153 -1 378 0 0 0 chr2 192848869 192848911 -57838943 + (CA)n Simple_repeat Simple_repeat 1 42 0 29 78 0 0 chr2 192849207 192849271 -57838583 + AT_rich Low_complexity Low_complexity 1 64 0 238 324 62 41 chr2 192849554 192849699 -57838155 + MIR SINE MIR 1 148 -114 273 122 24 0 chr2 192849889 192849930 -57837924 - Tigger5 DNA MER2_type 0 2323 2282 1125 91 0 45 chr2 192850067 192850243 -57837611 - Tigger5 DNA MER2_type -99 2224 2057 282 71 0 24 chr2 192850310 192850352 -57837502 + MLT1L LTR MaLR 557 597 -18 907 249 35 4 chr2 192850978 192851207 -57836647 - MIR SINE MIR -25 237 2 231 228 165 0 chr2 192852231 192852310 -57835544 - L2 LINE L2 -1 3312 3221 3914 161 28 9 chr2 192853572 192854253 -57833601 - MER50 LTR ERV1 -23 711 18 510 292 99 6 chr2 192854360 192854521 -57833333 + MLT1I LTR MaLR 102 277 -132 23 54 0 0 chr2 192855034 192855071 -57832783 + AT_rich Low_complexity Low_complexity 1 37 0 25 51 0 0 chr2 192855245 192855284 -57832570 + AT_rich Low_complexity Low_complexity 1 39 0 308 236 36 115 chr2 192855299 192855464 -57832390 + L1ME LINE L1 5303 5454 -716 237 317 87 5 chr2 192855483 192855691 -57832163 + L1ME LINE L1 5506 5730 -391 231 167 0 0 chr2 192855932 192855974 -57831880 + (TA)n Simple_repeat Simple_repeat 2 43 0 2714 65 35 3 chr2 192856029 192856399 -57831455 + L1PA12 LINE L1 5772 6153 -15 660 357 96 17 chr2 192856466 192856872 -57830982 - L2 LINE L2 -1 3312 2875 501 227 83 26 chr2 192856983 192857140 -57830714 + MIR SINE MIR 98 262 0 289 344 0 0 chr2 192857250 192857340 -57830514 - MER58 DNA MER1_type -2141 279 190 7424 33 8 0 chr2 192857352 192858746 -57829108 - L1PA5 LINE L1 -8 6146 4748 5120 36 0 0 chr2 192858746 192859361 -57828493 + L1PA5 LINE L1 4134 4748 -1398 189 0 0 0 chr2 192859392 192859413 -57828441 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 369 296 45 75 chr2 192859659 192859858 -57827996 + MLT1I LTR MaLR 355 547 -2 22 0 0 0 chr2 192861093 192861115 -57826739 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr2 192861377 192861418 -57826436 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 192861624 192861646 -57826208 + AT_rich Low_complexity Low_complexity 1 22 0 201 94 0 0 chr2 192862225 192862257 -57825597 + (TA)n Simple_repeat Simple_repeat 1 32 0 23 54 0 0 chr2 192862322 192862359 -57825495 + AT_rich Low_complexity Low_complexity 1 37 0 951 133 7 24 chr2 192862442 192862735 -57825119 + (GGAA)n Simple_repeat Simple_repeat 2 289 0 2415 258 50 36 chr2 192862848 192863624 -57824230 - L1M2a LINE L1 -6379 789 3 1776 222 52 4 chr2 192863633 192864092 -57823762 - L1MCa LINE L1 -3221 3205 2725 1123 225 28 61 chr2 192864088 192864308 -57823546 - L1MCa LINE L1 -5270 1156 953 * 2165 189 26 0 chr2 192864308 192864725 -57823129 - MSTA LTR MaLR 0 428 1 1123 225 28 61 chr2 192864725 192864899 -57822955 - L1MCa LINE L1 -5473 953 775 489 98 8 57 chr2 192865005 192865127 -57822727 + (GGAA)n Simple_repeat Simple_repeat 1 116 0 189 337 21 49 chr2 192865729 192865933 -57821921 + MIR SINE MIR 15 261 -1 27 29 0 0 chr2 192866612 192866646 -57821208 + AT_rich Low_complexity Low_complexity 1 34 0 23 97 0 0 chr2 192867053 192867125 -57820729 + AT_rich Low_complexity Low_complexity 1 72 0 3523 174 48 32 chr2 192868429 192869157 -57818697 + L1MB5 LINE L1 5422 6161 -13 7340 29 1 0 chr2 192869866 192870740 -57817114 + L1PA3 LINE L1 5281 6155 0 818 297 81 11 chr2 192871727 192872162 -57815692 - L1M4 LINE L1 -2428 3718 3254 21 57 0 0 chr2 192872437 192872472 -57815382 + AT_rich Low_complexity Low_complexity 1 35 0 274 308 49 49 chr2 192873760 192873903 -57813951 + MIR SINE MIR 11 153 -109 2630 196 21 17 chr2 192876419 192877001 -57810853 - L1PA15 LINE L1 -947 5199 4616 5320 130 21 34 chr2 192877003 192877972 -57809882 + L1PA15 LINE L1 5211 6164 -1 249 256 33 33 chr2 192878284 192878374 -57809480 + MLT1I LTR MaLR 57 146 -263 22 0 0 0 chr2 192879432 192879454 -57808400 + AT_rich Low_complexity Low_complexity 1 22 0 2238 75 3 26 chr2 192880122 192880429 -57807425 + AluY SINE Alu 1 300 -11 605 271 57 53 chr2 192880795 192881042 -57806812 - MIR SINE MIR -14 248 1 5022 41 6 0 chr2 192881158 192881787 -57806067 - L1PA4 LINE L1 -762 5384 4752 6372 27 3 9 chr2 192881787 192882555 -57805299 + L1PA4 LINE L1 5389 6152 -3 367 282 197 0 chr2 192884678 192884820 -57803034 - MER5A DNA MER1_type -11 178 9 268 299 20 27 chr2 192885581 192885758 -57802096 + GA-rich Low_complexity Low_complexity 1 175 0 674 183 49 0 chr2 192885769 192885911 -57801943 - L1MA10 LINE L1 0 6334 6186 2942 249 49 18 chr2 192885976 192886881 -57800973 - L1MDa LINE L1 -1202 5338 4406 2497 109 0 3 chr2 192887000 192887367 -57800487 + L1PA13 LINE L1 5798 6163 0 2588 233 100 5 chr2 192887415 192889032 -57798822 - L1MDa LINE L1 -2952 3588 1783 324 291 24 31 chr2 192889446 192889573 -57798281 - ERVL LTR ERVL -5143 621 496 566 264 44 22 chr2 192889612 192889794 -57798060 + ERVL LTR ERVL 2609 2794 -2970 205 227 0 83 chr2 192889869 192890001 -57797853 + T-rich Low_complexity Low_complexity 5 125 0 258 275 103 51 chr2 192890029 192890360 -57797494 - L1M4 LINE L1 -2967 3179 2814 2113 137 0 0 chr2 192890360 192890653 -57797201 - AluSx SINE Alu -19 293 1 258 275 103 51 chr2 192890653 192890808 -57797046 - L1M4 LINE L1 -3332 2814 2668 22 70 0 0 chr2 192890823 192890866 -57796988 + AT_rich Low_complexity Low_complexity 1 43 0 392 274 116 58 chr2 192891521 192891813 -57796041 - HAL1b LINE L1 -420 928 620 1383 162 8 13 chr2 192894482 192894717 -57793137 + AluJb SINE Alu 58 291 -21 460 303 80 24 chr2 192895022 192895273 -57792581 - MLT1L LTR MaLR -333 282 18 373 220 212 42 chr2 192895814 192896078 -57791776 - L1ME4a LINE L1 -202 5919 5611 560 275 104 9 chr2 192896277 192896488 -57791366 - MIR SINE MIR -21 241 11 30 27 0 0 chr2 192896748 192896785 -57791069 + AT_rich Low_complexity Low_complexity 1 37 0 230 292 16 0 chr2 192897579 192897651 -57790203 + MER115 DNA AcHobo 1 61 -632 731 325 17 4 chr2 192897657 192897888 -57789966 + Zaphod DNA AcHobo 193 426 -3605 583 139 65 0 chr2 192897898 192898006 -57789848 + MER115 DNA AcHobo 553 667 -26 4012 173 10 13 chr2 192898121 192898833 -57789021 - MER50 LTR ERV1 -24 710 1 216 0 0 0 chr2 192900752 192900776 -57787078 + (A)n Simple_repeat Simple_repeat 1 24 0 544 271 31 56 chr2 192901526 192901814 -57786040 + MER34B LTR ERV1 276 556 -9 3618 137 51 3 chr2 192903418 192904040 -57783814 - L1PA16 LINE L1 -3 6163 5512 284 352 78 26 chr2 192904120 192904313 -57783541 - MLT1J LTR MaLR -78 433 231 275 213 0 16 chr2 192904439 192904500 -57783354 - MLT1L LTR MaLR -538 77 18 22 70 0 0 chr2 192904529 192904572 -57783282 + AT_rich Low_complexity Low_complexity 1 43 0 21 71 0 0 chr2 192905107 192905149 -57782705 + AT_rich Low_complexity Low_complexity 1 42 0 27 29 0 0 chr2 192905279 192905313 -57782541 + AT_rich Low_complexity Low_complexity 1 34 0 362 316 120 8 chr2 192906467 192906600 -57781254 + MIR3 SINE MIR 31 178 -30 1560 239 101 43 chr2 192907164 192907751 -57780103 - MLT1E3 LTR MaLR -3 621 1 594 290 81 29 chr2 192907916 192908188 -57779666 + LTR16A LTR ERVL 51 345 -105 260 333 48 0 chr2 192908271 192908376 -57779478 + HERV16 LTR ERVL 12 121 -4875 2107 191 31 5 chr2 192908626 192909040 -57778814 + MSTB LTR MaLR 2 426 0 2375 133 6 6 chr2 192909062 192909423 -57778431 + THE1B LTR MaLR 1 361 -3 403 275 9 9 chr2 192909915 192910024 -57777830 + HERV16 LTR ERVL 720 828 -4168 942 332 202 24 chr2 192910153 192910830 -57777024 + L1MA5 LINE L1 1 798 -6411 * 5178 204 73 44 chr2 192910815 192911238 -57776616 + L1MA5 LINE L1 1664 2073 -5289 1340 168 0 137 chr2 192911238 192911596 -57776258 + AluSc SINE Alu 1 309 0 5178 204 73 44 chr2 192911596 192913055 -57774799 + L1MA5 LINE L1 2073 3488 -3874 1527 191 16 33 chr2 192913055 192913359 -57774495 + AluJo SINE Alu 1 299 -13 2073 67 0 4 chr2 192913361 192913631 -57774223 + AluY SINE Alu 41 309 -2 5178 204 73 44 chr2 192913631 192914314 -57773540 + L1MA5 LINE L1 3488 4150 -3212 348 24 0 0 chr2 192914314 192914355 -57773499 + (CA)n Simple_repeat Simple_repeat 2 42 0 5178 204 73 44 chr2 192914355 192917210 -57770644 + L1MA5 LINE L1 4150 7358 -4 636 363 70 23 chr2 192917536 192917966 -57769888 + HERV16 LTR ERVL 1376 1825 -3171 1125 191 27 35 chr2 192918013 192918270 -57769584 + MSTC LTR MaLR 1 255 -173 2836 275 82 61 chr2 192918371 192919438 -57768416 + MLT-int LTR MaLR 240 1328 -407 1712 197 19 38 chr2 192919439 192919805 -57768049 + MSTC LTR MaLR 70 428 0 359 314 172 23 chr2 192919888 192920149 -57767705 + HERV16 LTR ERVL 1987 2286 -2710 1326 202 62 39 chr2 192920168 192920495 -57767359 + MSTA LTR MaLR 3 309 -55 21 71 0 0 chr2 192921570 192921612 -57766242 + AT_rich Low_complexity Low_complexity 1 42 0 351 293 162 18 chr2 192921743 192921910 -57765944 - MIR SINE MIR 0 262 72 649 298 71 55 chr2 192922005 192922314 -57765540 + MLT1I LTR MaLR 86 399 -10 3474 134 26 82 chr2 192922858 192924205 -57763649 + pTR5 LTR ERV1 744 2468 0 3708 181 76 59 chr2 192924433 192925507 -57762347 - L1MC3 LINE L1 -20 7765 5469 39 0 0 0 chr2 192925976 192926015 -57761839 + AT_rich Low_complexity Low_complexity 1 39 0 1087 146 0 0 chr2 192926025 192926183 -57761671 - AluSp SINE Alu -24 289 132 441 0 0 0 chr2 192926769 192926818 -57761036 + (CA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr2 192932963 192932985 -57754869 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 192933883 192933912 -57753942 + AT_rich Low_complexity Low_complexity 1 29 0 33 0 0 0 chr2 192936203 192936236 -57751618 + AT_rich Low_complexity Low_complexity 1 33 0 308 310 125 54 chr2 192938094 192938715 -57749139 - L1ME4a LINE L1 -162 5959 5295 25 0 0 0 chr2 192938862 192938887 -57748967 + AT_rich Low_complexity Low_complexity 1 25 0 1807 176 0 19 chr2 192939543 192939856 -57747998 + AluJb SINE Alu 1 307 -5 26 0 0 0 chr2 192940035 192940061 -57747793 + AT_rich Low_complexity Low_complexity 1 26 0 26 50 0 0 chr2 192940635 192940675 -57747179 + AT_rich Low_complexity Low_complexity 1 40 0 369 323 8 0 chr2 192942896 192943029 -57744825 + MER94 DNA DNA 1 134 0 7133 132 22 44 chr2 192943422 192944632 -57743222 + THE1-int LTR MaLR 248 1431 -149 22 0 0 0 chr2 192944757 192944779 -57743075 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr2 192944867 192944905 -57742949 + AT_rich Low_complexity Low_complexity 1 38 0 29 47 0 0 chr2 192945038 192945081 -57742773 + AT_rich Low_complexity Low_complexity 1 43 0 370 169 14 0 chr2 192945424 192945495 -57742359 - MER116 DNA Mariner -4 76 5 270 324 60 76 chr2 192946460 192946843 -57741011 + L2 LINE L2 1551 1927 -1387 251 290 117 68 chr2 192947752 192947914 -57739940 - MIR SINE MIR -73 189 20 2291 211 96 38 chr2 192948099 192948738 -57739116 - MER76 LTR ERV -12 676 1 2739 0 0 0 chr2 192949071 192949368 -57738486 - AluYa5 SINE Alu -14 297 1 893 113 7 0 chr2 192950099 192950240 -57737614 + L1MA4 LINE L1 6153 6294 -6 21 0 0 0 chr2 192950240 192950261 -57737593 + AT_rich Low_complexity Low_complexity 1 21 0 383 290 111 12 chr2 192950261 192950423 -57737431 + Charlie8 DNA MER1_type 88 265 -2152 1238 84 0 0 chr2 192951092 192951259 -57736595 - L1PA8 LINE L1 -1 6171 6005 25 51 0 0 chr2 192951607 192951646 -57736208 + AT_rich Low_complexity Low_complexity 1 39 0 187 352 66 11 chr2 192951953 192952044 -57735810 - MIR SINE MIR -77 185 90 1128 341 99 18 chr2 192953392 192954010 -57733844 + L2 LINE L2 2233 2900 -414 323 281 62 56 chr2 192954039 192954217 -57733637 + L2 LINE L2 3005 3183 -130 1668 164 0 77 chr2 192954974 192955298 -57732556 - AluJb SINE Alu -13 299 1 1727 115 30 26 chr2 192956619 192956923 -57730931 - L1MA8 LINE L1 -134 6157 5853 1729 174 7 3 chr2 192958474 192958762 -57729092 - AluJb SINE Alu -22 290 2 23 0 0 0 chr2 192959788 192959811 -57728043 + AT_rich Low_complexity Low_complexity 1 23 0 694 252 65 42 chr2 192960843 192961105 -57726749 - MER102a DNA MER1_type -31 299 32 2087 98 10 7 chr2 193011453 193011748 -57676106 + AluSp SINE Alu 1 296 -17 203 0 37 0 chr2 193011817 193011844 -57676010 + (TA)n Simple_repeat Simple_repeat 2 29 0 263 261 0 0 chr2 193011848 193011936 -57675918 + L1MC4 LINE L1 6616 6703 -1339 526 245 50 7 chr2 193011943 193012087 -57675767 - MIR SINE MIR -58 204 54 2443 148 41 0 chr2 193012619 193013030 -57674824 - MSTA LTR MaLR 0 428 1 21 36 0 0 chr2 193013968 193013996 -57673858 + AT_rich Low_complexity Low_complexity 1 28 0 2036 123 7 0 chr2 193014318 193014619 -57673235 + AluSg1 SINE Alu 1 303 -6 226 260 42 115 chr2 193014661 193014757 -57673097 + MLT1I LTR MaLR 260 348 -61 2822 242 71 11 chr2 193014757 193015674 -57672180 - L1M4 LINE L1 -867 5279 4308 362 213 38 12 chr2 193017274 193017354 -57670500 + MLT1I LTR MaLR 92 173 -236 253 270 54 18 chr2 193017472 193017583 -57670271 + MLT1I LTR MaLR 289 403 -6 25 0 0 0 chr2 193018476 193018501 -57669353 + AT_rich Low_complexity Low_complexity 1 25 0 1742 213 31 62 chr2 193021055 193021572 -57666282 - MLT1D LTR MaLR -3 502 2 3319 155 34 7 chr2 193022146 193022708 -57665146 - LTR12 LTR ERV1 0 714 138 2114 78 11 14 chr2 193022987 193023296 -57664558 - AluY SINE Alu 0 308 1 600 103 75 28 chr2 193023779 193023886 -57663968 - AluSc SINE Alu 0 309 198 1207 294 54 35 chr2 193024293 193024498 -57663356 - MLT1E2 LTR MaLR -1 625 425 1944 170 3 0 chr2 193024498 193024809 -57663045 - AluSx SINE Alu 0 312 1 1207 294 54 35 chr2 193024809 193025083 -57662771 - MLT1E2 LTR MaLR -201 425 137 7536 238 58 57 chr2 193025198 193028827 -57659027 + L1M2 LINE L1 457 4082 -2268 5868 29 0 0 chr2 193028827 193029515 -57658339 - L1PA4 LINE L1 0 6155 5468 7536 238 58 57 chr2 193029515 193029683 -57658171 + L1M2 LINE L1 4082 4248 -2102 1376 153 227 14 chr2 193029683 193030036 -57657818 - MSTA LTR MaLR 0 428 1 7536 238 58 57 chr2 193030036 193030457 -57657397 + L1M2 LINE L1 4248 4310 -2040 1671 192 10 0 chr2 193030457 193030764 -57657090 - AluJb SINE Alu -2 310 1 7536 238 58 57 chr2 193030764 193031173 -57656681 + L1M2 LINE L1 4310 4717 -1633 2167 154 2 22 chr2 193031174 193031438 -57656416 + L1M2 LINE L1 5330 5582 -913 1816 179 14 11 chr2 193031438 193031801 -57656053 + THE1B LTR MaLR 1 364 0 2167 154 2 22 chr2 193031801 193032063 -57655791 + L1M2 LINE L1 5582 5848 -647 26 0 0 0 chr2 193032968 193032994 -57654860 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 193033443 193033464 -57654390 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 193034082 193034118 -57653736 + AT_rich Low_complexity Low_complexity 1 36 0 1591 179 21 14 chr2 193034386 193034676 -57653178 - AluJb SINE Alu -18 294 3 671 320 106 65 chr2 193034732 193035750 -57652104 - L2 LINE L2 -5 3308 2215 1808 144 40 40 chr2 193035750 193036125 -57651729 + THE1C LTR MaLR 1 375 0 671 320 106 65 chr2 193036125 193036398 -57651456 - L2 LINE L2 -1098 2215 1955 308 304 98 9 chr2 193037728 193037840 -57650014 + L2 LINE L2 3148 3269 -3 22 35 0 0 chr2 193037947 193037976 -57649878 + AT_rich Low_complexity Low_complexity 1 29 0 266 332 123 11 chr2 193038556 193038743 -57649111 - MIR SINE MIR -6 256 49 707 302 94 50 chr2 193038889 193039033 -57648821 + L1M4 LINE L1 3803 3939 -2207 2592 32 3 10 chr2 193039033 193039342 -57648512 - AluY SINE Alu -4 307 1 707 302 94 50 chr2 193039342 193039774 -57648080 + L1M4 LINE L1 3939 4404 -1742 6149 204 19 14 chr2 193040090 193041744 -57646110 - L1 LINE L1 -2592 4973 3305 332 234 47 0 chr2 193041780 193041887 -57645967 - L2 LINE L2 -1943 1371 1260 790 192 108 12 chr2 193042367 193042534 -57645320 + MER20 DNA MER1_type 4 186 -33 353 247 114 25 chr2 193042596 193042754 -57645100 - MLT1L LTR MaLR -279 336 165 387 237 82 30 chr2 193043506 193043641 -57644213 + MIR3 SINE MIR 56 197 -11 243 310 0 0 chr2 193043807 193043865 -57643989 - L2 LINE L2 -10 3262 3205 1332 194 4 0 chr2 193043979 193044210 -57643644 - MLT1A1 LTR MaLR 0 365 134 3035 92 0 0 chr2 193044210 193044610 -57643244 + MLT2A1 LTR ERVL 1 400 -44 42428 80 10 7 chr2 193044610 193050207 -57637647 + HERVL-A1 LTR ERVL 40 5654 0 2522 154 52 20 chr2 193050207 193050705 -57637149 + MLT2A1 LTR ERVL 1 520 0 795 174 0 7 chr2 193050705 193050844 -57637010 - MLT1A1 LTR MaLR -227 138 1 854 308 21 0 chr2 193051055 193051295 -57636559 + MIR SINE MIR 15 259 -3 189 171 0 0 chr2 193051424 193051459 -57636395 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 203 254 28 42 chr2 193052089 193052160 -57635694 - L3b LINE CR1 -88 1495 1426 28 48 0 0 chr2 193052324 193052366 -57635488 + AT_rich Low_complexity Low_complexity 1 42 0 230 300 36 80 chr2 193053616 193053979 -57633875 + HAL1 LINE L1 825 1171 -1336 554 281 100 6 chr2 193054162 193054408 -57633446 - L2 LINE L2 -317 2955 2679 276 240 0 40 chr2 193054906 193054981 -57632873 - MIR SINE MIR -60 202 131 339 271 36 66 chr2 193055471 193055637 -57632217 + MLT1L LTR MaLR 7 167 -448 259 319 105 19 chr2 193055789 193056046 -57631808 + MLT1J LTR MaLR 233 511 0 350 367 70 13 chr2 193056911 193057140 -57630714 + L3b LINE CR1 1102 1343 -240 29 0 0 0 chr2 193058338 193058367 -57629487 + AT_rich Low_complexity Low_complexity 1 29 0 184 180 0 33 chr2 193059595 193059656 -57628198 + CT-rich Low_complexity Low_complexity 2 60 0 197 333 0 0 chr2 193061320 193061380 -57626474 - MIR3 SINE MIR -11 197 138 2596 82 3 61 chr2 193063338 193063729 -57624125 - pTR5 LTR ERV1 -2046 392 25 302 308 78 86 chr2 193064426 193064770 -57623084 - LTR67 LTR ERVL -6 551 211 1633 221 33 58 chr2 193064770 193065286 -57622568 + MLT1D LTR MaLR 3 505 0 302 308 78 86 chr2 193065286 193065489 -57622365 - LTR67 LTR ERVL -346 211 8 267 31 0 0 chr2 193065721 193065753 -57622101 + (TA)n Simple_repeat Simple_repeat 1 32 0 1422 166 55 44 chr2 193065753 193066115 -57621739 - L1MA8 LINE L1 -27 6264 5899 24 53 0 0 chr2 193066357 193066395 -57621459 + AT_rich Low_complexity Low_complexity 1 38 0 317 143 0 0 chr2 193068751 193068800 -57619054 + MADE1 DNA Mariner 31 79 -1 26 50 0 0 chr2 193071800 193071840 -57616014 + AT_rich Low_complexity Low_complexity 1 40 0 500 0 17 0 chr2 193072039 193072099 -57615755 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 408 20 0 0 chr2 193072110 193072159 -57615695 + (TA)n Simple_repeat Simple_repeat 1 49 0 22 56 0 0 chr2 193072159 193072195 -57615659 + AT_rich Low_complexity Low_complexity 1 36 0 190 171 0 49 chr2 193072227 193072268 -57615586 + (TA)n Simple_repeat Simple_repeat 1 39 0 749 228 102 5 chr2 193073102 193073317 -57614537 + MER106A DNA MER1_type 1 236 0 636 99 0 0 chr2 193073345 193073446 -57614408 + L1MA7 LINE L1 6189 6289 -2 25 31 0 0 chr2 193073446 193073478 -57614376 + AT_rich Low_complexity Low_complexity 1 32 0 28 61 0 0 chr2 193074721 193074770 -57613084 + AT_rich Low_complexity Low_complexity 1 49 0 195 42 0 0 chr2 193076093 193076117 -57611737 + (GGGAGA)n Simple_repeat Simple_repeat 1 24 0 256 83 42 0 chr2 193076117 193076165 -57611689 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 23 0 0 0 chr2 193077855 193077878 -57609976 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr2 193078370 193078413 -57609441 + AT_rich Low_complexity Low_complexity 1 43 0 2149 244 28 13 chr2 193078440 193078976 -57608878 - L1MD2 LINE L1 -17 6342 5799 292 160 0 47 chr2 193082145 193082251 -57605603 + (TA)n Simple_repeat Simple_repeat 2 102 0 2133 108 0 0 chr2 193082251 193082538 -57605316 - AluSx SINE Alu -25 287 1 231 130 0 0 chr2 193082927 193082973 -57604881 + LTR66 LTR ERVL 394 439 -171 198 0 0 0 chr2 193082973 193082995 -57604859 + (CA)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr2 193083567 193083589 -57604265 + AT_rich Low_complexity Low_complexity 1 22 0 185 344 80 26 chr2 193083858 193084009 -57603845 - MIR SINE MIR -46 216 58 273 364 66 26 chr2 193086523 193086674 -57601180 + MIR SINE MIR 20 176 -86 236 233 17 0 chr2 193086886 193086946 -57600908 + (TA)n Simple_repeat Simple_repeat 2 62 0 23 0 0 0 chr2 193087802 193087825 -57600029 + AT_rich Low_complexity Low_complexity 1 23 0 183 162 0 0 chr2 193090236 193090273 -57597581 + (TA)n Simple_repeat Simple_repeat 2 38 0 23 33 0 0 chr2 193091366 193091396 -57596458 + AT_rich Low_complexity Low_complexity 1 30 0 235 314 58 0 chr2 193092497 193092583 -57595271 - MIR3 SINE MIR -1 207 117 292 221 78 0 chr2 193093267 193093344 -57594510 + MIR SINE MIR 175 257 -5 21 57 0 0 chr2 193097071 193097106 -57590748 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr2 193097666 193097708 -57590146 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr2 193097797 193097819 -57590035 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 193098469 193098493 -57589361 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr2 193098938 193098976 -57588878 + AT_rich Low_complexity Low_complexity 1 38 0 610 335 30 17 chr2 193099215 193099448 -57588406 - MIR SINE MIR -21 241 6 180 0 0 0 chr2 193100469 193100489 -57587365 + (T)n Simple_repeat Simple_repeat 1 20 0 255 337 11 41 chr2 193103149 193103463 -57584391 + GA-rich Low_complexity Low_complexity 1 304 0 2065 54 8 0 chr2 193106291 193106550 -57581304 - AluY SINE Alu -12 299 39 325 386 67 29 chr2 193110955 193111271 -57576583 + L2 LINE L2 2924 3251 -21 21 36 0 0 chr2 193111486 193111514 -57576340 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 193111712 193111737 -57576117 + AT_rich Low_complexity Low_complexity 1 25 0 303 325 57 16 chr2 193113401 193113524 -57574330 + L2 LINE L2 3139 3266 -6 21 36 0 0 chr2 193113594 193113622 -57574232 + AT_rich Low_complexity Low_complexity 1 28 0 200 333 45 0 chr2 193114090 193114156 -57573698 + L2 LINE L2 3204 3272 0 195 114 0 0 chr2 193114328 193114363 -57573491 + (CA)n Simple_repeat Simple_repeat 2 36 0 481 300 150 0 chr2 193114369 193114529 -57573325 - MIR SINE MIR -78 184 1 359 216 62 0 chr2 193114762 193114859 -57572995 - MARNA DNA Mariner -336 250 148 201 196 0 0 chr2 193115482 193115528 -57572326 + (TA)n Simple_repeat Simple_repeat 1 46 0 247 307 153 40 chr2 193116286 193116514 -57571340 + L3 LINE CR1 668 921 -656 311 223 0 34 chr2 193116829 193116977 -57570877 + CT-rich Low_complexity Low_complexity 2 144 0 180 125 0 0 chr2 193116970 193117002 -57570852 + (TTCTCC)n Simple_repeat Simple_repeat 3 34 0 * 6582 79 3 3 chr2 193117039 193118110 -57569744 - L1PB1 LINE L1 -1 6150 5078 6950 192 13 1 chr2 193118114 193118924 -57568930 + L1 LINE L1 3591 4427 -1719 234 0 0 0 chr2 193118924 193118950 -57568904 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 6950 192 13 1 chr2 193118950 193119563 -57568291 + L1 LINE L1 4427 5031 -1115 876 289 73 31 chr2 193119628 193120012 -57567842 + L2 LINE L2 2914 3313 0 301 343 29 0 chr2 193120035 193120140 -57567714 + L2 LINE L2 2246 2353 -961 296 360 75 0 chr2 193120670 193120817 -57567037 + L2 LINE L2 3147 3304 -9 304 291 53 26 chr2 193121642 193121793 -57566061 - L2 LINE L2 -99 3214 3060 21 36 0 0 chr2 193122491 193122519 -57565335 + AT_rich Low_complexity Low_complexity 1 28 0 555 187 5 43 chr2 193123216 193123403 -57564451 + CT-rich Low_complexity Low_complexity 1 180 0 361 271 46 79 chr2 193123690 193123970 -57563884 + L1MC4a LINE L1 6058 6328 -1480 2549 279 55 26 chr2 193123989 193125119 -57562735 + L1MC4 LINE L1 6748 7909 -133 433 272 22 17 chr2 193125095 193125275 -57562579 + L1ME1 LINE L1 2173 2353 -4043 * 2714 250 62 30 chr2 193125273 193128074 -57559780 + L1ME1 LINE L1 3184 6173 -62 521 206 92 0 chr2 193127994 193128135 -57559719 + L1MA10 LINE L1 6249 6402 -1 * 711 246 70 55 chr2 193128377 193128633 -57559221 - MER21B LTR ERV1 -194 669 410 1299 161 0 5 chr2 193128715 193128926 -57558928 + MER2 DNA MER2_type 1 210 -135 752 223 71 113 chr2 193129023 193129332 -57558522 - MER77 LTR ERV1 -255 350 55 387 271 29 24 chr2 193129501 193129671 -57558183 - LTR1 LTR ERV1 -6 820 650 1104 249 83 49 chr2 193129714 193130204 -57557650 - LTR1 LTR ERV1 -328 498 1 * 1708 251 102 27 chr2 193130204 193130940 -57556914 + Zaphod DNA AcHobo 184 975 -3056 818 237 8 25 chr2 193130964 193131200 -57556654 + Zaphod DNA AcHobo 3655 3886 -145 401 296 75 2 chr2 193131219 193131398 -57556456 + Zaphod DNA AcHobo 505 4031 0 2116 112 0 34 chr2 193131763 193132085 -57555769 + AluSx SINE Alu 1 311 -1 295 326 11 0 chr2 193132612 193132707 -57555147 - MIR SINE MIR -100 162 67 5034 146 63 10 chr2 193133074 193134037 -57553817 - L1MA7 LINE L1 -1 6290 5277 278 345 9 17 chr2 193134136 193134252 -57553602 + MIR SINE MIR 39 153 -109 3243 176 43 53 chr2 193134252 193135069 -57552785 + pTR5 LTR ERV1 744 1552 -886 227 241 17 0 chr2 193135171 193135229 -57552625 - LTR30 LTR ERV1 -111 611 553 3215 129 80 52 chr2 193135231 193135937 -57551917 - pTR5 LTR ERV1 -406 2032 1174 235 270 24 71 chr2 193136192 193136318 -57551536 + L1ME LINE L1 304 423 -5949 1452 96 5 0 chr2 193136999 193137197 -57550657 - AluY SINE Alu -15 296 98 234 309 98 24 chr2 193137197 193137436 -57550418 + L1ME LINE L1 1203 1462 -4910 440 263 11 17 chr2 193138114 193138305 -57549549 + L1ME LINE L1 2372 2561 -3821 298 315 50 45 chr2 193139190 193139374 -57548480 + MIR SINE MIR 9 190 -72 345 47 0 0 chr2 193139463 193139506 -57548348 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 1836 139 0 28 chr2 193139509 193139796 -57548058 - AluSx SINE Alu -33 279 1 184 368 0 15 chr2 193140081 193140149 -57547705 + L2 LINE L2 3193 3259 -13 234 91 0 0 chr2 193140634 193140667 -57547187 + (GA)n Simple_repeat Simple_repeat 2 34 0 2013 86 41 0 chr2 193140966 193141235 -57546619 - AluSx SINE Alu -9 303 24 22 70 0 0 chr2 193141556 193141599 -57546255 + AT_rich Low_complexity Low_complexity 1 43 0 297 283 94 24 chr2 193142711 193142888 -57544966 - MIR3 SINE MIR -9 199 8 26 64 0 0 chr2 193143002 193143049 -57544805 + AT_rich Low_complexity Low_complexity 1 47 0 288 324 41 99 chr2 193144216 193144642 -57543212 + L2 LINE L2 988 1437 -1877 578 276 176 9 chr2 193144642 193144863 -57542991 - MIR SINE MIR -3 259 2 288 324 41 99 chr2 193144863 193145322 -57542532 + L2 LINE L2 1437 2029 -1285 493 41 14 14 chr2 193145329 193145402 -57542452 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 251 150 0 0 chr2 193145402 193145442 -57542412 + MLT2B2 LTR ERVL 476 515 0 330 268 80 0 chr2 193145492 193145604 -57542250 + L2 LINE L2 3192 3312 -1 249 348 94 56 chr2 193145608 193145740 -57542114 + L2 LINE L2 2362 2508 -806 1802 179 12 50 chr2 193145740 193146143 -57541711 - MLT1B LTR MaLR 0 390 3 249 348 94 56 chr2 193146143 193146243 -57541611 + L2 LINE L2 2508 2603 -711 1635 259 83 23 chr2 193146259 193146787 -57541067 + MLT1E LTR MaLR 34 593 0 676 344 83 21 chr2 193146792 193147414 -57540440 + L2 LINE L2 2612 3272 0 381 310 90 13 chr2 193148356 193148511 -57539343 - Charlie8 DNA MER1_type -2141 276 110 212 282 94 51 chr2 193148597 193148714 -57539140 + MIR SINE MIR 1 122 -140 316 317 25 0 chr2 193149032 193149152 -57538702 + L3b LINE CR1 1249 1371 -212 22 35 0 0 chr2 193149611 193149640 -57538214 + AT_rich Low_complexity Low_complexity 1 29 0 401 339 9 0 chr2 193149710 193149822 -57538032 - MIR3 SINE MIR -9 199 87 541 250 96 32 chr2 193150393 193150581 -57537273 + MIR SINE MIR 6 205 -57 25 51 0 0 chr2 193152168 193152207 -57535647 + AT_rich Low_complexity Low_complexity 1 39 0 230 122 0 0 chr2 193152207 193152248 -57535606 - AluSx SINE Alu 0 302 262 1266 141 0 5 chr2 193152251 193152436 -57535418 - AluSx SINE Alu -128 184 1 29 0 0 0 chr2 193152724 193152753 -57535101 + AT_rich Low_complexity Low_complexity 1 29 0 189 171 0 0 chr2 193152799 193152834 -57535020 + (TA)n Simple_repeat Simple_repeat 2 36 0 29 47 0 0 chr2 193152949 193152992 -57534862 + AT_rich Low_complexity Low_complexity 1 43 0 411 245 54 82 chr2 193155691 193155875 -57531979 + MIR SINE MIR 84 262 0 378 285 91 63 chr2 193156677 193157074 -57530780 + L1MCc LINE L1 18 425 -5998 316 342 32 6 chr2 193157496 193157654 -57530200 + L1MCc LINE L1 1129 1290 -5133 2793 199 30 16 chr2 193157655 193158348 -57529506 - L1MB8 LINE L1 0 6178 5476 26281 146 12 18 chr2 193158357 193164768 -57523086 - L1PA8 LINE L1 0 6487 4 6592 220 37 8 chr2 193164768 193166605 -57521249 - L1MB8 LINE L1 -685 5489 3601 23 0 0 0 chr2 193166607 193166630 -57521224 + AT_rich Low_complexity Low_complexity 1 23 0 276 281 62 10 chr2 193168247 193168343 -57519511 + MIR3 SINE MIR 91 191 -17 374 294 28 39 chr2 193168949 193169088 -57518766 - MER102b DNA MER1_type -3 338 202 650 267 91 9 chr2 193169088 193169298 -57518556 + MLT1J2 LTR MaLR 1 227 -223 2112 176 20 0 chr2 193169420 193169777 -57518077 + THE1B LTR MaLR 1 364 0 25 0 0 0 chr2 193169792 193169817 -57518037 + AT_rich Low_complexity Low_complexity 1 25 0 186 167 0 0 chr2 193169828 193169841 -57518013 + (TA)n Simple_repeat Simple_repeat 1 13 -35 2477 107 85 17 chr2 193169841 193170253 -57517601 + MLT2A1 LTR ERVL 5 444 0 186 167 0 0 chr2 193170253 193170287 -57517567 + (TA)n Simple_repeat Simple_repeat 12 48 0 315 303 53 0 chr2 193170368 193170500 -57517354 - MER102b DNA MER1_type -157 184 46 216 433 21 0 chr2 193170536 193170677 -57517177 + L2 LINE L2 2868 3011 -261 436 246 88 139 chr2 193171540 193172088 -57515766 + MLT1H LTR MaLR 31 550 -5 263 341 28 0 chr2 193172697 193172826 -57515028 + MIR3 SINE MIR 51 183 -25 391 305 53 63 chr2 193174425 193174743 -57513111 - L2 LINE L2 0 3313 2999 270 235 30 37 chr2 193175637 193175949 -57511905 + (CACCC)n Simple_repeat Simple_repeat 1 309 0 404 278 69 35 chr2 193177071 193177244 -57510610 - MIR SINE MIR -82 180 2 23 33 0 0 chr2 193177798 193177828 -57510026 + AT_rich Low_complexity Low_complexity 1 30 0 2606 116 14 10 chr2 193178372 193178785 -57509069 - L1MA6 LINE L1 0 6300 5886 1514 272 131 30 chr2 193178936 193179745 -57508109 - L1ME3A LINE L1 -8 6162 5272 25 51 0 0 chr2 193179745 193179784 -57508070 + AT_rich Low_complexity Low_complexity 1 39 0 2358 56 14 0 chr2 193179789 193180107 -57507747 + AluY SINE Alu 1 322 0 4089 218 34 14 chr2 193180110 193181161 -57506693 - L1MA9 LINE L1 -38 6274 5203 2997 173 27 8 chr2 193181203 193181839 -57506015 - L1MA8 LINE L1 -2 6289 5642 5835 206 29 14 chr2 193181844 193183046 -57504808 - L1MA8 LINE L1 -719 5581 4230 279 0 0 0 chr2 193183046 193183077 -57504777 + (TG)n Simple_repeat Simple_repeat 2 32 0 5835 206 29 14 chr2 193183077 193183402 -57504452 - L1MA8 LINE L1 -2070 4230 3911 455 280 6 6 chr2 193233500 193233815 -57454039 + G-rich Low_complexity Low_complexity 1 315 0 433 170 43 0 chr2 193233834 193233928 -57453926 + L1PA2 LINE L1 6055 6152 -3 27 49 0 0 chr2 193233928 193233969 -57453885 + AT_rich Low_complexity Low_complexity 1 41 0 363 340 75 62 chr2 193234010 193234381 -57453473 - L2 LINE L2 -429 2885 2510 450 279 47 31 chr2 193234386 193234640 -57453214 + MIR SINE MIR 1 258 -4 198 159 23 0 chr2 193234673 193234717 -57453137 - L3 LINE CR1 -857 720 676 2263 19 0 0 chr2 193235923 193236182 -57451672 + L1PA3 LINE L1 5894 6152 -3 1057 231 17 0 chr2 193236202 193236440 -57451414 + MLT1D LTR MaLR 264 505 0 1568 241 39 3 chr2 193236569 193236930 -57450924 - MLT1A2 LTR MaLR 0 374 1 657 169 89 0 chr2 193237658 193237782 -57450072 + L1PB4 LINE L1 6019 6153 -3 2384 182 5 7 chr2 193238503 193238938 -57448916 + Tigger2a DNA MER2_type 1 434 0 21 36 0 0 chr2 193239433 193239461 -57448393 + AT_rich Low_complexity Low_complexity 1 28 0 302 295 101 22 chr2 193239940 193240079 -57447775 - L2 LINE L2 -5 3308 3159 27 0 0 0 chr2 193240407 193240434 -57447420 + AT_rich Low_complexity Low_complexity 1 27 0 2211 108 6 10 chr2 193240443 193240757 -57447097 - AluSq SINE Alu 0 313 1 25 0 0 0 chr2 193241253 193241278 -57446576 + AT_rich Low_complexity Low_complexity 1 25 0 1976 123 0 30 chr2 193243014 193243314 -57444540 - AluSx SINE Alu -21 291 1 320 224 0 0 chr2 193243849 193243907 -57443947 + Charlie8 DNA MER1_type 1363 1420 -997 230 95 24 0 chr2 193244149 193244191 -57443663 + (CA)n Simple_repeat Simple_repeat 1 43 0 218 175 0 18 chr2 193245829 193245886 -57441968 + (TA)n Simple_repeat Simple_repeat 2 57 0 180 0 0 0 chr2 193246172 193246192 -57441662 + (A)n Simple_repeat Simple_repeat 1 20 0 241 329 12 12 chr2 193247540 193247622 -57440232 + MIR SINE MIR 63 144 -118 282 331 187 45 chr2 193249163 193249913 -57437941 + L2 LINE L2 1512 2367 -947 805 317 20 43 chr2 193250292 193250686 -57437168 - L2 LINE L2 0 3313 2929 1173 216 53 0 chr2 193250692 193250937 -57436917 - MLT1D LTR MaLR 0 505 248 1106 241 49 26 chr2 193251289 193251634 -57436220 - MLT1D LTR MaLR -152 353 1 552 329 81 52 chr2 193251714 193251825 -57436029 - L2 LINE L2 -501 2813 2707 2253 88 0 10 chr2 193251825 193252121 -57435733 - AluSg SINE Alu -17 293 1 552 329 81 52 chr2 193252121 193252356 -57435498 - L2 LINE L2 -607 2707 2457 1459 157 66 18 chr2 193252808 193253082 -57434772 - AluJo SINE Alu -14 298 12 599 272 66 53 chr2 193253190 193253433 -57434421 - MIR SINE MIR 0 262 17 336 256 97 102 chr2 193253896 193254072 -57433782 - MIR SINE MIR -19 243 69 846 271 28 9 chr2 193254194 193254412 -57433442 + MIR SINE MIR 36 257 -5 559 86 43 34 chr2 193254485 193254602 -57433252 + AluSg SINE Alu 1 118 -192 346 306 0 0 chr2 193254602 193254736 -57433118 + C-rich Low_complexity Low_complexity 1 134 0 452 80 27 86 chr2 193254737 193254924 -57432930 + (CCCCCA)n Simple_repeat Simple_repeat 4 179 0 199 132 29 29 chr2 193254979 193255047 -57432807 + (CACCC)n Simple_repeat Simple_repeat 3 70 0 201 318 48 32 chr2 193255176 193255239 -57432615 - L2 LINE L2 -94 3178 3115 950 69 0 0 chr2 193255821 193255937 -57431917 + AluY SINE Alu 187 302 -9 207 389 154 13 chr2 193256776 193256925 -57430929 + L2 LINE L2 3102 3271 -1 2285 102 3 0 chr2 193257147 193257441 -57430413 - AluSp SINE Alu -18 295 1 1087 137 25 49 chr2 193257509 193257713 -57430141 + MLT1C LTR MaLR 6 204 -263 408 103 0 44 chr2 193257716 193257784 -57430070 + MLT1C LTR MaLR 403 467 0 222 219 0 0 chr2 193258014 193258055 -57429799 - MIR SINE MIR -169 93 53 22 0 0 0 chr2 193258910 193258932 -57428922 + AT_rich Low_complexity Low_complexity 1 22 0 235 227 53 13 chr2 193259655 193259730 -57428124 + C-rich Low_complexity Low_complexity 1 78 0 373 297 95 14 chr2 193260318 193260466 -57427388 + MIR SINE MIR 61 220 -42 414 310 103 7 chr2 193261320 193261475 -57426379 - MER5B DNA MER1_type -2 176 7 21 0 0 0 chr2 193262279 193262300 -57425554 + AT_rich Low_complexity Low_complexity 1 21 0 217 329 0 24 chr2 193262817 193262902 -57424952 - L2 LINE L2 -1 3312 3230 191 158 26 0 chr2 193263158 193263196 -57424658 - L2 LINE L2 -4 3309 3271 269 345 24 0 chr2 193263273 193263357 -57424497 + L2 LINE L2 3162 3247 -25 555 298 46 94 chr2 193263623 193263952 -57423902 - L2 LINE L2 -1 3312 3000 2230 120 0 0 chr2 193265424 193265716 -57422138 + AluSx SINE Alu 1 292 -20 427 283 38 59 chr2 193267355 193267616 -57420238 + L1MC/D LINE L1 5266 5522 -599 549 258 22 39 chr2 193267925 193268107 -57419747 - MER97c DNA MER1_type? -911 179 1 2290 86 0 3 chr2 193268213 193268505 -57419349 + AluSx SINE Alu 2 292 -20 963 218 133 46 chr2 193268627 193269014 -57418840 - L1ME1 LINE L1 -5 6161 5754 649 186 8 0 chr2 193269946 193270070 -57417784 + FLAM_A SINE Alu 18 142 0 649 165 0 18 chr2 193270085 193270194 -57417660 + FRAM SINE Alu 55 161 -15 22 94 0 0 chr2 193270997 193271061 -57416793 + AT_rich Low_complexity Low_complexity 1 64 0 195 157 0 0 chr2 193271666 193271717 -57416137 + A-rich Low_complexity Low_complexity 1 51 0 404 127 13 38 chr2 193271884 193271963 -57415891 + AluS SINE Alu 1 77 -226 2233 103 3 0 chr2 193272942 193273232 -57414622 + AluSx SINE Alu 1 291 -21 334 270 228 11 chr2 193274398 193274587 -57413267 - MIR SINE MIR 0 262 33 258 194 0 0 chr2 193274960 193275022 -57412832 + (TA)n Simple_repeat Simple_repeat 1 62 0 29 47 0 0 chr2 193275129 193275172 -57412682 + AT_rich Low_complexity Low_complexity 1 43 0 30 69 0 0 chr2 193275323 193275381 -57412473 + AT_rich Low_complexity Low_complexity 1 58 0 416 291 39 84 chr2 193276230 193276588 -57411266 - Charlie8 DNA MER1_type -2050 367 26 2131 103 0 3 chr2 193276627 193276909 -57410945 - AluSg SINE Alu -29 281 1 3178 187 25 16 chr2 193277096 193277763 -57410091 + L1MC3 LINE L1 6596 7268 -517 1042 135 0 0 chr2 193277768 193277924 -57409930 + AluSp SINE Alu 141 296 -17 2310 153 113 6 chr2 193277938 193278415 -57409439 + L1MC3 LINE L1 7256 7783 -2 2192 119 0 0 chr2 193278428 193278730 -57409124 + AluSg SINE Alu 1 302 -8 228 293 140 33 chr2 193279906 193280056 -57407798 - MIR SINE MIR 0 262 97 22 56 0 0 chr2 193280799 193280835 -57407019 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 193280997 193281018 -57406836 + AT_rich Low_complexity Low_complexity 1 21 0 599 315 20 0 chr2 193281784 193281933 -57405921 + MER91A DNA MER1_type 2 153 -43 226 148 37 0 chr2 193283163 193283217 -57404637 + (TA)n Simple_repeat Simple_repeat 2 57 0 24 32 0 0 chr2 193283254 193283285 -57404569 + AT_rich Low_complexity Low_complexity 1 31 0 182 382 27 9 chr2 193284166 193284276 -57403578 + L2 LINE L2 3200 3311 -2 21 0 0 0 chr2 193285236 193285257 -57402597 + AT_rich Low_complexity Low_complexity 1 21 0 1860 130 4 4 chr2 193286739 193287015 -57400839 + AluSx SINE Alu 1 276 -36 23 78 0 0 chr2 193288353 193288404 -57399450 + AT_rich Low_complexity Low_complexity 1 51 0 524 286 91 17 chr2 193288658 193288833 -57399021 - L3 LINE CR1 -18 1559 1372 282 368 26 47 chr2 193289979 193290169 -57397685 - MIR SINE MIR -43 219 34 448 319 32 37 chr2 193291158 193291346 -57396508 - MIR SINE MIR -43 219 33 206 234 21 0 chr2 193291997 193292044 -57395810 + (CA)n Simple_repeat Simple_repeat 1 48 0 614 165 91 0 chr2 193292518 193292639 -57395215 - FLAM_C SINE Alu -5 138 7 199 390 41 8 chr2 193292674 193292797 -57395057 + L2 LINE L2 3187 3313 0 1593 188 0 29 chr2 193292864 193293172 -57394682 - AluJo SINE Alu -13 299 1 454 162 45 10 chr2 193293337 193293493 -57394361 + MER3 DNA MER1_type 1 207 -2 29 60 0 0 chr2 193293544 193293594 -57394260 + AT_rich Low_complexity Low_complexity 1 50 0 1959 233 21 54 chr2 193293597 193294112 -57393742 - MLT1D LTR MaLR 0 505 8 282 245 226 9 chr2 193294120 193294226 -57393628 + L2 LINE L2 3185 3313 0 22 0 0 0 chr2 193294278 193294300 -57393554 + AT_rich Low_complexity Low_complexity 1 22 0 218 192 0 13 chr2 193294990 193295068 -57392786 + (TA)n Simple_repeat Simple_repeat 1 77 0 433 246 98 8 chr2 193296119 193296241 -57391613 + L2 LINE L2 3173 3305 -8 775 178 45 38 chr2 193297902 193298059 -57389795 + AluSg/x SINE Alu 129 286 -24 46 19 0 0 chr2 193298059 193298112 -57389742 + AT_rich Low_complexity Low_complexity 1 53 0 317 320 28 44 chr2 193298582 193298763 -57389091 + L2 LINE L2 1606 1783 -1531 2214 99 36 0 chr2 193298993 193299295 -57388559 - AluSp SINE Alu 0 313 1 194 222 22 0 chr2 193299840 193299885 -57387969 - L2 LINE L2 -6 3307 3262 303 344 104 16 chr2 193300365 193300490 -57387364 + L2 LINE L2 3137 3272 0 21 0 0 0 chr2 193301278 193301299 -57386555 + AT_rich Low_complexity Low_complexity 1 21 0 207 315 0 11 chr2 193301299 193301391 -57386463 + CT-rich Low_complexity Low_complexity 3 93 0 412 321 0 0 chr2 193301989 193302101 -57385753 - MIR SINE MIR -67 141 30 24 0 0 0 chr2 193303481 193303505 -57384349 + AT_rich Low_complexity Low_complexity 1 24 0 348 305 49 38 chr2 193303768 193303914 -57383940 - MIR SINE MIR -49 159 10 213 39 0 0 chr2 193304116 193304142 -57383712 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2092 62 21 10 chr2 193305711 193305999 -57381855 - AluY SINE Alu -18 293 3 21 0 0 0 chr2 193306000 193306021 -57381833 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr2 193307330 193307365 -57380489 + AT_rich Low_complexity Low_complexity 1 35 0 1869 107 24 24 chr2 193307484 193307774 -57380080 - AluSq SINE Alu -23 290 1 278 359 10 0 chr2 193307902 193308005 -57379849 - MIR SINE MIR -111 151 48 42 48 0 0 chr2 193308578 193308641 -57379213 + AT_rich Low_complexity Low_complexity 1 63 0 642 346 133 41 chr2 193308933 193309843 -57378011 - L2 LINE L2 -452 2862 1869 1336 218 32 42 chr2 193311013 193311471 -57376383 + MSTD LTR MaLR 15 394 -2 268 322 115 14 chr2 193311781 193311989 -57375865 - MIR SINE MIR -11 251 23 1667 181 29 31 chr2 193312069 193312489 -57375365 + Charlie1 DNA MER1_type 2343 2761 0 305 271 132 77 chr2 193312607 193312947 -57374907 - L1ME4a LINE L1 -74 6047 5689 * 2148 113 0 0 chr2 193312915 193313225 -57374629 - L1P LINE L1 -2032 4114 3805 * 8264 110 16 1 chr2 193313223 193314482 -57373372 + L1P LINE L1 4114 5391 -755 474 262 138 13 chr2 193314485 193314783 -57373071 - L1MCa LINE L1 -4826 2115 1781 462 250 29 15 chr2 193314817 193314953 -57372901 - L1MCa LINE L1 -6253 170 33 237 276 13 77 chr2 193314975 193315131 -57372723 - HAL1b LINE L1 -426 922 777 812 295 87 6 chr2 193315142 193315511 -57372343 - LTR33 LTR ERVL -101 420 1 1981 78 0 0 chr2 193317216 193317461 -57370393 + AluY SINE Alu 50 294 -17 234 359 64 32 chr2 193317515 193317671 -57370183 + L2 LINE L2 2873 3033 -280 24 0 0 0 chr2 193317836 193317860 -57369994 + AT_rich Low_complexity Low_complexity 1 24 0 5399 84 23 4 chr2 193317860 193318609 -57369245 - L1PA8 LINE L1 -7 6165 5403 462 250 29 15 chr2 193318643 193318779 -57369075 + L1MCc LINE L1 33 170 -6253 992 272 102 40 chr2 193318799 193319494 -57368360 + L1MCc LINE L1 1972 2709 -4413 260 200 164 9 chr2 193319522 193319632 -57368222 + L1MCc LINE L1 2763 2889 -4233 * 422 312 72 51 chr2 193319629 193320122 -57367732 + L1MEc LINE L1 972 1464 -4665 33 73 0 0 chr2 193320235 193320303 -57367551 + AT_rich Low_complexity Low_complexity 1 68 0 2582 45 0 0 chr2 193322164 193322475 -57365379 - AluY SINE Alu 0 311 1 322 283 24 73 chr2 193322957 193323162 -57364692 + MER117 DNA MER1_type 1 195 -2 350 318 28 3 chr2 193323532 193323717 -57364137 - MIR SINE MIR -10 252 10 235 324 110 7 chr2 193323848 193323993 -57363861 + MIR SINE MIR 99 258 -4 243 280 77 65 chr2 193325739 193325907 -57361947 - L2 LINE L2 0 3313 3144 496 338 152 11 chr2 193325911 193326459 -57361395 + L2 LINE L2 1765 2389 -925 356 280 47 19 chr2 193326519 193326626 -57361228 + L2 LINE L2 3203 3312 -1 326 238 119 0 chr2 193327023 193327124 -57360730 + LTR50 LTR ERVL 8 120 -675 358 275 113 6 chr2 193327242 193327432 -57360422 + LTR50 LTR ERVL 356 642 -153 255 312 64 0 chr2 193327409 193327534 -57360320 + LTR33A LTR ERVL 391 523 0 * 241 267 100 33 chr2 193327536 193327626 -57360228 - L2 LINE L2 -623 2691 2596 649 273 141 9 chr2 193327673 193327893 -57359961 - MIR SINE MIR 0 262 14 436 312 84 56 chr2 193327894 193328253 -57359601 - L2 LINE L2 -757 2557 2189 436 291 42 58 chr2 193329778 193330039 -57357815 + L1ME3A LINE L1 5266 5522 -2286 580 260 22 33 chr2 193330346 193330527 -57357327 - MER97b DNA MER1_type? -874 179 1 2307 84 0 3 chr2 193330633 193330929 -57356925 + AluSx SINE Alu 2 296 -16 261 83 0 0 chr2 193331141 193331177 -57356677 + (TA)n Simple_repeat Simple_repeat 2 37 0 1916 149 0 3 chr2 193331177 193331466 -57356388 - AluSq SINE Alu -25 288 1 712 215 152 27 chr2 193331717 193331973 -57355881 + L1MC5 LINE L1 7246 7533 -428 334 314 46 29 chr2 193332110 193332285 -57355569 + L1ME3A LINE L1 5987 6164 -6 423 282 100 67 chr2 193332294 193332833 -57355021 + L1ME4a LINE L1 5482 6038 -83 24 0 0 0 chr2 193332853 193332877 -57354977 + AT_rich Low_complexity Low_complexity 1 24 0 366 317 25 55 chr2 193333184 193333383 -57354471 - MIR SINE MIR -34 228 36 508 254 0 0 chr2 193333463 193333577 -57354277 - MER81 DNA DNA 0 114 1 1492 157 23 26 chr2 193333585 193333891 -57353963 + MER33 DNA MER1_type 5 309 -15 26 0 0 0 chr2 193334778 193334804 -57353050 + AT_rich Low_complexity Low_complexity 1 26 0 372 290 175 37 chr2 193334912 193335129 -57352725 + MIR SINE MIR 16 262 0 1206 272 77 28 chr2 193335556 193335920 -57351934 + MER69 DNA AcHobo 64 445 -2081 1349 238 97 8 chr2 193336463 193336846 -57351008 + MLT1C LTR MaLR 5 421 -46 2149 275 56 20 chr2 193336872 193337588 -57350266 + MER69 DNA AcHobo 438 1179 -1347 703 191 37 6 chr2 193337627 193337789 -57350065 + MER69 DNA AcHobo 2356 2522 -4 393 262 202 39 chr2 193338095 193338109 -57349745 - LTR16A LTR ERVL -179 271 261 706 220 51 45 chr2 193338109 193338286 -57349568 + MER45A DNA AcHobo 1 178 0 393 262 202 39 chr2 193338286 193338504 -57349350 - LTR16A LTR ERVL -189 261 1 677 254 57 5 chr2 193339109 193339318 -57348536 + L2 LINE L2 3094 3313 0 180 0 0 0 chr2 193339799 193339819 -57348035 + (TAA)n Simple_repeat Simple_repeat 2 21 0 402 303 0 18 chr2 193340476 193340602 -57347252 - MER5A DNA MER1_type 0 189 55 1314 261 97 35 chr2 193341761 193342244 -57345610 + L1ME3A LINE L1 5653 6165 -5 2078 131 0 0 chr2 193342684 193342975 -57344879 + AluSx SINE Alu 1 291 -21 547 292 54 54 chr2 193344181 193344421 -57343433 + MIR SINE MIR 22 261 -1 1096 278 71 41 chr2 193344561 193344953 -57342901 + L1MB1 LINE L1 1 404 -5487 346 309 33 53 chr2 193345006 193345158 -57342696 + L1MB1 LINE L1 522 670 -5221 838 241 160 21 chr2 193345347 193345629 -57342225 + L1MB1 LINE L1 680 1000 -4891 * 12294 203 41 17 chr2 193345616 193347694 -57340160 + L1MB1 LINE L1 1921 3949 -2043 192 77 0 0 chr2 193347694 193347720 -57340134 + (CA)n Simple_repeat Simple_repeat 1 26 0 12294 203 41 17 chr2 193347720 193349614 -57338240 + L1MB1 LINE L1 3949 5992 0 1457 227 13 3 chr2 193350874 193351187 -57336667 + MLT1A1 LTR MaLR 1 316 -49 601 185 31 3 chr2 193351922 193352116 -57335738 + Tigger5 DNA MER2_type 1 265 -2058 423 191 0 24 chr2 193352135 193352219 -57335635 + Tigger5 DNA MER2_type 2242 2323 0 452 324 34 47 chr2 193352443 193352909 -57334945 - HAL1b LINE L1 -445 903 444 310 259 90 95 chr2 193352911 193353100 -57334754 + MIR SINE MIR 3 190 -72 799 165 52 139 chr2 193353118 193353463 -57334391 - MER33 DNA MER1_type -9 315 1 273 216 113 0 chr2 193353663 193353760 -57334094 - L1ME3A LINE L1 -5 6165 6058 2132 262 48 46 chr2 193353776 193354038 -57333816 - L1ME3A LINE L1 -200 5970 5710 2606 181 45 31 chr2 193354038 193354590 -57333264 + MER68 LTR ERV1 3 562 0 2132 262 48 46 chr2 193354590 193355290 -57332564 - L1ME3A LINE L1 -460 5710 5006 361 259 67 47 chr2 193355318 193355511 -57332343 - HAL1b LINE L1 -995 353 157 242 188 0 21 chr2 193356761 193356807 -57331047 - THE1B LTR MaLR 0 364 320 2336 134 8 16 chr2 193356807 193357180 -57330674 - THE1C LTR MaLR 0 375 6 21 0 0 0 chr2 193357226 193357247 -57330607 + AT_rich Low_complexity Low_complexity 1 21 0 579 294 20 37 chr2 193357292 193357537 -57330317 - MER102a DNA MER1_type -10 320 80 2087 179 39 85 chr2 193357542 193357801 -57330053 + MLT1D LTR MaLR 12 237 -268 2251 19 0 0 chr2 193357801 193358060 -57329794 + L1PA3 LINE L1 5894 6152 -3 2087 179 39 85 chr2 193358060 193358318 -57329536 + MLT1D LTR MaLR 237 505 0 1577 238 39 3 chr2 193358447 193358808 -57329046 - MLT1A2 LTR MaLR 0 374 1 662 169 89 0 chr2 193359536 193359660 -57328194 + L1PB4 LINE L1 6019 6153 -3 1106 172 44 10 chr2 193359777 193359981 -57327873 + AluJb SINE Alu 88 298 -14 303 272 95 19 chr2 193360182 193360356 -57327498 - L1P4 LINE L1 -698 5468 5283 456 318 101 12 chr2 193360530 193360748 -57327106 - MIR SINE MIR -13 249 16 233 179 0 18 chr2 193361469 193361525 -57326329 + GA-rich Low_complexity Low_complexity 3 57 0 1896 135 129 9 chr2 193361588 193361913 -57325941 - THE1B LTR MaLR 0 364 1 2257 81 3 0 chr2 193361913 193362211 -57325643 - THE1B-int LTR MaLR 0 1580 1282 * 5783 72 6 88 chr2 193362180 193363083 -57324771 - THE1B-int LTR MaLR -751 829 1 2079 135 48 25 chr2 193363083 193363439 -57324415 - THE1B LTR MaLR 0 364 1 2103 46 46 8 chr2 193363763 193364025 -57323829 - AluY SINE Alu -10 301 30 2014 143 3 0 chr2 193365860 193366160 -57321694 - AluSx SINE Alu -11 301 1 2070 130 0 3 chr2 193367970 193368278 -57319576 - AluSq SINE Alu -6 307 1 848 284 27 5 chr2 193368471 193368693 -57319161 - MIR SINE MIR -21 241 15 229 277 133 31 chr2 193368876 193369132 -57318722 + L2 LINE L2 1487 1768 -1546 272 214 129 0 chr2 193369297 193369367 -57318487 + MIR SINE MIR 112 190 -72 22 0 0 0 chr2 193369418 193369440 -57318414 + AT_rich Low_complexity Low_complexity 1 22 0 417 245 9 19 chr2 193369619 193369725 -57318129 - L2 LINE L2 0 3313 3209 7425 28 6 2 chr2 193369965 193371048 -57316806 + L1PA5 LINE L1 5065 6151 -3 27 49 0 0 chr2 193371048 193371089 -57316765 + AT_rich Low_complexity Low_complexity 1 41 0 361 340 75 62 chr2 193371130 193371501 -57316353 - L2 LINE L2 -429 2885 2510 446 279 47 31 chr2 193371506 193371760 -57316094 + MIR SINE MIR 1 258 -4 195 159 23 0 chr2 193371793 193371837 -57316017 - L3 LINE CR1 -857 720 676 215 370 93 97 chr2 193373895 193374206 -57313648 - L2 LINE L2 -4 3268 2959 188 264 111 42 chr2 193374349 193374421 -57313433 - L2 LINE L2 -28 3244 3168 693 256 136 39 chr2 193374893 193374931 -57312923 - L1MC4a LINE L1 -1948 5860 5827 1909 105 87 7 chr2 193374931 193375208 -57312646 - AluSg SINE Alu -11 299 1 693 256 136 39 chr2 193375208 193375501 -57312353 - L1MC4a LINE L1 -1981 5827 5497 22 0 0 0 chr2 193375691 193375713 -57312141 + AT_rich Low_complexity Low_complexity 1 22 0 2406 93 0 0 chr2 193376113 193376423 -57311431 + AluY SINE Alu 1 310 -1 283 265 182 23 chr2 193377159 193377291 -57310563 + MIR3 SINE MIR 41 193 -15 371 367 60 14 chr2 193378999 193379214 -57308640 + L3b LINE CR1 1279 1503 -80 28 48 0 0 chr2 193379295 193379337 -57308517 + AT_rich Low_complexity Low_complexity 1 42 0 22 70 0 0 chr2 193380266 193380309 -57307545 + AT_rich Low_complexity Low_complexity 1 43 0 336 133 0 0 chr2 193380614 193380674 -57307180 + (CA)n Simple_repeat Simple_repeat 2 61 0 22 0 0 0 chr2 193380860 193380882 -57306972 + AT_rich Low_complexity Low_complexity 1 22 0 266 185 46 0 chr2 193381016 193381081 -57306773 - MER20B DNA MER1_type -171 612 545 800 253 120 39 chr2 193381226 193381534 -57306320 - MER20B DNA MER1_type -448 335 3 2463 177 97 14 chr2 193381647 193382202 -57305652 + MER7C DNA MER2_type 1 601 -1 266 247 14 0 chr2 193382210 193382283 -57305571 + L1ME3A LINE L1 2756 2829 -3317 429 282 66 24 chr2 193382369 193382582 -57305272 + L1ME3A LINE L1 4316 4537 -1609 546 275 18 0 chr2 193382630 193382797 -57305057 + L1ME3A LINE L1 5793 5962 -208 636 188 55 18 chr2 193383357 193383522 -57304332 + L1MB7 LINE L1 4971 5141 -1005 1587 218 76 10 chr2 193383522 193383931 -57303923 - MLT1C LTR MaLR -24 443 8 3958 167 36 30 chr2 193383958 193384425 -57303429 + L1MB7 LINE L1 5345 5821 -363 2102 130 0 0 chr2 193384425 193384718 -57303136 + AluSg SINE Alu 1 293 -17 3958 167 36 30 chr2 193384718 193385077 -57302777 + L1MB7 LINE L1 5821 6176 -8 43 56 0 0 chr2 193385216 193385287 -57302567 + AT_rich Low_complexity Low_complexity 1 71 0 529 290 108 39 chr2 193387296 193387555 -57300299 - L3b LINE CR1 -143 1440 1164 9162 102 25 1 chr2 193387555 193388931 -57298923 - L1PA7 LINE L1 -2011 4135 2727 9084 85 0 6 chr2 193388931 193390945 -57296909 + L1PA7 LINE L1 4133 6141 -13 186 267 19 114 chr2 193391537 193391582 -57296272 + MIR SINE MIR 102 133 -129 4669 149 26 12 chr2 193391582 193392422 -57295432 + L1MA8 LINE L1 5436 6287 -4 186 267 19 114 chr2 193392422 193392481 -57295373 + MIR SINE MIR 133 196 -66 21 0 0 0 chr2 193393142 193393163 -57294691 + AT_rich Low_complexity Low_complexity 1 21 0 2287 105 3 0 chr2 193393728 193394032 -57293822 - AluSg SINE Alu -2 308 4 331 195 13 0 chr2 193394306 193394383 -57293471 - MER116 DNA Mariner -2 78 1 358 358 17 8 chr2 193395276 193395396 -57292458 + MIR SINE MIR 32 152 -110 457 262 145 70 chr2 193396791 193397293 -57290561 - L1MDa LINE L1 -1129 1772 1293 26 0 0 0 chr2 193397391 193397417 -57290437 + AT_rich Low_complexity Low_complexity 1 26 0 185 128 0 26 chr2 193397425 193397464 -57290390 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 519 138 0 0 chr2 193398962 193399042 -57288812 - MADE1 DNA Mariner 0 80 1 254 346 13 72 chr2 193399136 193399289 -57288565 - MIR SINE MIR -59 203 60 385 259 122 0 chr2 193399703 193399842 -57288012 - L2 LINE L2 0 3313 3158 1948 115 3 7 chr2 193399934 193400220 -57287634 + AluSq SINE Alu 1 285 -28 25 0 0 0 chr2 193400221 193400246 -57287608 + AT_rich Low_complexity Low_complexity 1 25 0 315 222 19 9 chr2 193401214 193401322 -57286532 + GA-rich Low_complexity Low_complexity 4 112 0 2321 171 26 20 chr2 193401419 193401876 -57285978 + L1MC3 LINE L1 7325 7784 -1 1887 132 142 16 chr2 193402317 193402697 -57285157 - MSTA LTR MaLR 0 428 1 736 196 28 7 chr2 193402728 193402871 -57284983 - Tigger3(Golem) DNA MER2_type -6 3023 2878 263 212 0 91 chr2 193402872 193402938 -57284916 - Tigger3(Golem) DNA MER2_type -2969 60 1 450 0 0 0 chr2 193403103 193403153 -57284701 + (TG)n Simple_repeat Simple_repeat 2 51 0 264 304 30 49 chr2 193403512 193403679 -57284175 - MIR SINE MIR -62 200 37 21 0 0 0 chr2 193404776 193404797 -57283057 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 193405208 193405231 -57282623 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr2 193405318 193405347 -57282507 + AT_rich Low_complexity Low_complexity 1 29 0 195 149 0 43 chr2 193405523 193405570 -57282284 - L2 LINE L2 -4 3309 3265 6583 172 69 31 chr2 193406479 193407105 -57280749 + L1 LINE L1 3346 3947 -2199 2340 97 3 0 chr2 193407105 193407414 -57280440 + AluSx SINE Alu 1 310 -2 6583 172 69 31 chr2 193407414 193408275 -57279579 + L1 LINE L1 3947 4890 -1256 639 191 0 0 chr2 193408275 193408380 -57279474 + Tigger3(Golem) DNA MER2_type 2934 3038 0 518 318 133 23 chr2 193408414 193408760 -57279094 - L2 LINE L2 -1229 2085 1702 423 0 0 0 chr2 193408763 193408810 -57279044 + (CA)n Simple_repeat Simple_repeat 2 48 0 7171 31 0 0 chr2 193410465 193411322 -57276532 + L1PA3 LINE L1 5299 6155 0 811 297 72 8 chr2 193411329 193411539 -57276315 + LTR16C LTR ERVL 127 351 -140 1589 213 19 38 chr2 193411539 193411858 -57275996 + MLT1A1 LTR MaLR 3 316 -49 2427 65 0 10 chr2 193411858 193412165 -57275689 + AluY SINE Alu 1 304 -7 1589 213 19 38 chr2 193412165 193412211 -57275643 + MLT1A1 LTR MaLR 316 361 -4 475 228 147 0 chr2 193412201 193412337 -57275517 + LTR16C LTR ERVL 334 489 -2 * 1746 158 3 35 chr2 193412853 193413163 -57274691 - AluJo SINE Alu -12 300 1 1922 123 0 36 chr2 193413376 193413677 -57274177 + AluSx SINE Alu 1 290 -22 185 378 12 24 chr2 193413760 193413842 -57274012 + MIR SINE MIR 42 122 -86 421 232 64 0 chr2 193413843 193413968 -57273886 - L1ME2 LINE L1 0 6164 6032 * 423 263 120 73 chr2 193413957 193414659 -57273195 - L1ME LINE L1 -4816 1269 526 427 320 56 10 chr2 193414917 193415114 -57272740 - L1ME LINE L1 -5855 215 10 482 123 12 0 chr2 193415291 193415372 -57272482 + L1MA3 LINE L1 6221 6302 -3 204 331 69 41 chr2 193418619 193418764 -57269090 + MIR SINE MIR 40 188 -74 1716 182 7 3 chr2 193418776 193419067 -57268787 + AluJb SINE Alu 1 292 -20 3975 194 19 10 chr2 193420441 193421159 -57266695 + MER44D DNA MER2_type 9 605 0 2864 125 7 0 chr2 193421406 193421837 -57266017 + MER57B LTR ERV1 1 434 0 233 373 32 0 chr2 193422026 193422211 -57265643 - L1M4 LINE L1 -1857 4289 4099 2027 156 100 5 chr2 193422224 193422615 -57265239 - MSTA LTR MaLR 0 428 1 183 322 0 0 chr2 193422790 193422849 -57265005 - L2 LINE L2 -1329 1985 1927 739 295 87 58 chr2 193423064 193423145 -57264709 + ERVL LTR ERVL 4141 4218 -1546 1540 221 11 40 chr2 193423145 193423521 -57264333 + MLT1A1 LTR MaLR 1 365 0 739 295 87 58 chr2 193423521 193423853 -57264001 + ERVL LTR ERVL 4218 4566 -1198 556 261 81 12 chr2 193424160 193424321 -57263533 + LTR16A LTR ERVL 258 429 -21 23 0 0 0 chr2 193425278 193425301 -57262553 + AT_rich Low_complexity Low_complexity 1 23 0 249 140 105 70 chr2 193425373 193425430 -57262424 - MLT1J2 LTR MaLR 0 450 392 3529 118 37 2 chr2 193425430 193425965 -57261889 + MER41C LTR ERV1 1 554 0 4270 129 122 33 chr2 193426045 193426874 -57260980 + MER4D LTR ERV1 1 903 0 4171 147 44 9 chr2 193426946 193427632 -57260222 + MER50 LTR ERV1 1 710 -24 535 317 61 13 chr2 193427672 193427902 -57259952 - MLT1J2 LTR MaLR -205 245 5 5075 97 8 11 chr2 193428100 193428851 -57259003 + L1MA1 LINE L1 5304 6052 -250 650 160 50 4 chr2 193428862 193428984 -57258870 - L1P3 LINE L1 -5885 1699 483 606 172 0 0 chr2 193428982 193429069 -57258785 + L1PA12 LINE L1 1232 1318 -6263 * 2339 143 5 8 chr2 193430399 193431233 -57256621 + L1PA12 LINE L1 1304 3063 -4511 * 13418 173 11 6 chr2 193431201 193433718 -57254136 + L1PA12 LINE L1 3317 5846 -1738 3702 94 41 28 chr2 193433706 193434390 -57253464 + L1PA10 LINE L1 5373 6168 0 * 1488 129 4 0 chr2 193434390 193434623 -57253231 + L1PA13 LINE L1 5923 6156 -7 1804 82 4 0 chr2 193434653 193434909 -57252945 + L1MA1 LINE L1 6044 6300 -2 183 333 0 0 chr2 193435278 193435338 -57252516 - MIR SINE MIR -8 254 195 272 283 0 0 chr2 193435346 193435399 -57252455 - MIR SINE MIR -198 64 12 207 0 0 0 chr2 193435881 193435904 -57251950 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 42020 55 3 2 chr2 193437060 193443194 -57244660 + L1PA5 LINE L1 12 6150 -4 26 0 0 0 chr2 193443194 193443220 -57244634 + AT_rich Low_complexity Low_complexity 1 26 0 312 70 0 0 chr2 193443347 193443390 -57244464 + (CA)n Simple_repeat Simple_repeat 2 44 0 2288 116 0 0 chr2 193443684 193443994 -57243860 + AluSx SINE Alu 1 310 -2 23 33 0 0 chr2 193444142 193444172 -57243682 + AT_rich Low_complexity Low_complexity 1 30 0 1385 168 70 56 chr2 193444282 193444567 -57243287 + AluJo SINE Alu 1 289 -23 2182 129 0 0 chr2 193444748 193445084 -57242770 + AluSx SINE Alu 1 312 0 293 279 14 27 chr2 193445339 193445486 -57242368 + GA-rich Low_complexity Low_complexity 2 146 0 190 310 40 40 chr2 193446113 193446213 -57241641 - MIR SINE MIR 0 262 163 3707 149 49 14 chr2 193446899 193447595 -57240259 + L1MA9 LINE L1 5593 6312 0 304 267 62 79 chr2 193447927 193448167 -57239687 + L1ME2 LINE L1 229 464 -5959 569 285 17 44 chr2 193448700 193449192 -57238662 + L1ME2 LINE L1 1162 1817 -4899 275 192 0 19 chr2 193449192 193449208 -57238646 + AluJb SINE Alu 118 133 -169 748 176 15 0 chr2 193449208 193449339 -57238515 + FLAM_C SINE Alu 1 133 0 275 192 0 19 chr2 193449339 193449374 -57238480 + AluJb SINE Alu 133 168 -134 * 1802 119 115 26 chr2 193449370 193449682 -57238172 + THE1B LTR MaLR 25 364 0 1758 66 0 0 chr2 193449712 193449925 -57237929 + AluY SINE Alu 85 297 -14 1908 239 50 80 chr2 193450002 193450389 -57237465 + L1ME2 LINE L1 3172 3569 -3372 2155 122 51 25 chr2 193450389 193450742 -57237112 + THE1B LTR MaLR 3 364 0 1908 239 50 80 chr2 193450742 193451480 -57236374 + L1ME2 LINE L1 3569 4263 -2678 1972 174 32 5 chr2 193451480 193451860 -57235994 + MLT1B LTR MaLR 1 390 0 2685 274 52 15 chr2 193451956 193453173 -57234681 + L1ME2 LINE L1 4665 5926 -1015 1504 167 65 19 chr2 193453200 193453887 -57233967 + L1MB7 LINE L1 5397 6165 -19 2637 228 69 10 chr2 193453895 193454790 -57233064 + L1ME2 LINE L1 5970 6917 -42 2815 7 0 0 chr2 193455135 193455441 -57232413 - AluYa5 SINE Alu -5 306 1 23 0 0 0 chr2 193455447 193455470 -57232384 + AT_rich Low_complexity Low_complexity 1 23 0 222 219 0 42 chr2 193456612 193456708 -57231146 + (TTATA)n Simple_repeat Simple_repeat 1 92 0 296 294 40 73 chr2 193456975 193457031 -57230823 + Charlie8 DNA MER1_type 33 89 -252 2046 138 3 3 chr2 193457031 193457328 -57230526 + AluSx SINE Alu 4 300 -12 296 294 40 73 chr2 193457328 193457448 -57230406 + Charlie8 DNA MER1_type 89 203 -138 3263 122 27 4 chr2 193457452 193457936 -57229918 - LOR1a LTR ERV1 -2 495 1 657 167 0 0 chr2 193457936 193458038 -57229816 - LOR1a-int LTR ERV1 0 8120 8019 572 77 44 33 chr2 193458031 193458122 -57229732 - LOR1a-int LTR ERV1 -861 7259 7168 * 335 123 18 0 chr2 193458122 193458179 -57229675 - MER72 LTR ERV1 -650 72 15 1276 169 19 0 chr2 193458179 193458392 -57229462 - LOR1a-int LTR ERV1 -1075 7045 6829 1657 130 4 8 chr2 193458584 193458830 -57229024 - LTR49-int LTR ERV1 -4097 4023 3779 414 204 44 26 chr2 193458820 193458933 -57228921 - LTR49-int LTR ERV1 -2186 4145 4031 * 12486 150 73 53 chr2 193459214 193460600 -57227254 - LTR49-int LTR ERV1 -4367 3753 2396 369 0 0 0 chr2 193460600 193460641 -57227213 + (CA)n Simple_repeat Simple_repeat 2 42 0 12486 150 73 53 chr2 193460641 193462597 -57225257 - LTR49-int LTR ERV1 -5724 2396 294 435 287 87 11 chr2 193462705 193462980 -57224874 + L1M4 LINE L1 3212 3507 -2639 240 243 100 14 chr2 193463132 193463202 -57224652 + L2 LINE L2 3197 3272 0 489 190 11 60 chr2 193463255 193463402 -57224452 - MLT1A1 LTR MaLR -213 152 14 2169 99 6 29 chr2 193463439 193463753 -57224101 - AluSx SINE Alu -5 307 1 2400 72 7 3 chr2 193463756 193464063 -57223791 - AluY SINE Alu -3 308 1 12512 104 23 24 chr2 193464325 193466587 -57221267 - L1P3 LINE L1 -4142 2319 5 1591 128 4 4 chr2 193466595 193466844 -57221010 + Tigger1 DNA MER2_type 1250 1498 -920 2825 153 20 15 chr2 193466844 193467393 -57220461 - L1 LINE L1 -1361 4785 4234 1263 279 75 28 chr2 193467493 193468268 -57219586 - L1MEc LINE L1 -3206 3220 2410 419 293 150 38 chr2 193468290 193468750 -57219104 - L1MEc LINE L1 -4221 2386 1846 2189 121 3 0 chr2 193468750 193469047 -57218807 - AluSx SINE Alu -14 298 1 419 293 150 38 chr2 193469047 193469166 -57218688 - L1MEc LINE L1 -4761 1846 1742 1785 180 0 3 chr2 193469212 193469495 -57218359 - AluJo SINE Alu -27 285 4 379 251 118 38 chr2 193469578 193469865 -57217989 - L1MEc LINE L1 -4926 1500 1191 8710 152 23 30 chr2 193470546 193471719 -57216135 - L1PA11 LINE L1 0 6174 4995 2000 128 3 10 chr2 193471719 193472016 -57215838 - AluSc SINE Alu -14 295 1 8710 152 23 30 chr2 193472016 193472286 -57215568 - L1PA11 LINE L1 -1179 4995 4725 254 0 0 77 chr2 193472286 193472325 -57215529 + (TATAG)n Simple_repeat Simple_repeat 5 40 0 8710 152 23 30 chr2 193472325 193473326 -57214528 - L1PA11 LINE L1 -1449 4725 3742 1643 94 0 0 chr2 193473326 193473529 -57214325 - AluSc SINE Alu -106 203 1 3812 209 20 32 chr2 193473629 193473857 -57213997 - L1 LINE L1 -3152 4413 4184 2468 94 31 0 chr2 193473857 193474208 -57213646 - L1PA10 LINE L1 0 6168 5807 3812 209 20 32 chr2 193474208 193475326 -57212528 - L1 LINE L1 -3381 4184 3077 23 33 0 0 chr2 193475816 193475846 -57212008 + AT_rich Low_complexity Low_complexity 1 30 0 415 320 78 13 chr2 193476012 193476318 -57211536 + L1M4 LINE L1 3174 3499 -2647 628 265 37 59 chr2 193476338 193476799 -57211055 - L1M4 LINE L1 -1939 4207 3757 1976 265 95 6 chr2 193476979 193477643 -57210211 + MER69B DNA AcHobo 240 962 -264 2085 122 10 0 chr2 193477645 193477939 -57209915 + AluSx SINE Alu 1 297 -15 717 132 80 27 chr2 193477985 193478203 -57209651 + L1MC3 LINE L1 7393 7697 -88 703 223 127 9 chr2 193478253 193478482 -57209372 + MER69B DNA AcHobo 951 1206 -20 461 255 10 0 chr2 193478726 193478824 -57209030 + MIR SINE MIR 56 154 -108 390 269 28 0 chr2 193479356 193479464 -57208390 + MIR SINE MIR 152 262 0 1161 181 39 0 chr2 193479564 193479769 -57208085 + MER20 DNA MER1_type 1 213 -6 424 288 9 0 chr2 193480458 193480569 -57207285 - MER81 DNA DNA 0 114 3 25 65 0 0 chr2 193481069 193481115 -57206739 + AT_rich Low_complexity Low_complexity 1 46 0 1392 172 5 0 chr2 193482285 193482500 -57205354 - LOR1a-int LTR ERV1 -7903 217 2 534 194 37 9 chr2 193482501 193482609 -57205245 - LOR1a LTR ERV1 0 497 387 * 673 179 146 65 chr2 193482598 193482844 -57205010 - LOR1b LTR ERV1 -195 266 1 737 336 84 25 chr2 193482882 193483408 -57204446 - L2 LINE L2 -1007 2307 1751 284 293 41 49 chr2 193483748 193483871 -57203983 + MIR3 SINE MIR 38 159 -49 21 57 0 0 chr2 193484145 193484180 -57203674 + AT_rich Low_complexity Low_complexity 1 35 0 283 239 317 9 chr2 193484209 193484439 -57203415 - LTR50 LTR ERVL -24 771 471 237 306 114 42 chr2 193484574 193484767 -57203087 - LTR50 LTR ERVL -588 207 1 22 56 0 0 chr2 193485799 193485835 -57202019 + AT_rich Low_complexity Low_complexity 1 36 0 466 281 59 20 chr2 193486066 193486219 -57201635 + MIR3 SINE MIR 3 161 -47 269 297 76 48 chr2 193486219 193486364 -57201490 + MER117 DNA MER1_type 2 150 -47 191 397 0 0 chr2 193486532 193486595 -57201259 - MIR SINE MIR -65 143 81 240 409 75 0 chr2 193487595 193487754 -57200100 - L2 LINE L2 0 3272 3102 334 334 60 20 chr2 193488794 193489096 -57198758 + L1MC4a LINE L1 5582 5895 -1913 22770 83 11 1 chr2 193489378 193493343 -57194511 - L1PA7 LINE L1 0 6154 2157 384 190 20 50 chr2 193493649 193493749 -57194105 - MIR SINE MIR 0 262 166 306 295 147 45 chr2 193493889 193494045 -57193809 + MIR SINE MIR 20 191 -71 274 236 55 8 chr2 193494220 193494347 -57193507 + (CA)n Simple_repeat Simple_repeat 2 134 0 2549 154 22 0 chr2 193494574 193494989 -57192865 + MSTB LTR MaLR 1 424 -2 4635 203 12 0 chr2 193494991 193495838 -57192016 + MSTB-int LTR MaLR 1 857 -794 182 286 125 54 chr2 193495838 193495950 -57191904 + MIR SINE MIR 133 252 -10 204 288 30 15 chr2 193496991 193497057 -57190797 - L2 LINE L2 -5 3308 3242 22 35 0 0 chr2 193497822 193497851 -57190003 + AT_rich Low_complexity Low_complexity 1 29 0 2236 108 0 7 chr2 193498691 193498997 -57188857 - AluSg SINE Alu -6 304 1 22 56 0 0 chr2 193499404 193499440 -57188414 + AT_rich Low_complexity Low_complexity 1 36 0 28 48 0 0 chr2 193499804 193499846 -57188008 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr2 193500633 193500658 -57187196 + AT_rich Low_complexity Low_complexity 1 25 0 300 299 74 107 chr2 193500746 193501231 -57186623 + L2 LINE L2 2804 3272 0 2486 59 0 0 chr2 193502123 193502430 -57185424 + AluY SINE Alu 1 307 -4 368 309 56 0 chr2 193503326 193503452 -57184402 - MIR SINE MIR -110 152 20 25 0 0 0 chr2 193503709 193503734 -57184120 + AT_rich Low_complexity Low_complexity 1 25 0 213 229 9 57 chr2 193504050 193504155 -57183699 + A-rich Low_complexity Low_complexity 1 100 0 26 0 0 0 chr2 193504312 193504338 -57183516 + AT_rich Low_complexity Low_complexity 1 26 0 1988 264 113 18 chr2 193504350 193505256 -57182598 + HAL1b LINE L1 349 1340 -8 735 163 0 8 chr2 193505937 193506060 -57181794 + AluJb SINE Alu 183 304 -8 21 36 0 0 chr2 193506060 193506088 -57181766 + AT_rich Low_complexity Low_complexity 1 28 0 655 249 42 42 chr2 193506271 193506484 -57181370 - LTR7 LTR ERV1 0 450 238 1633 209 37 26 chr2 193506814 193507192 -57180662 - MLT1B LTR MaLR -8 382 1 1064 161 5 9 chr2 193507294 193507512 -57180342 - L1MA4 LINE L1 0 6300 6084 3401 153 22 0 chr2 193507620 193508359 -57179495 - L1MA4 LINE L1 -482 5818 5069 340 305 109 42 chr2 193508372 193508657 -57179197 - L1M4 LINE L1 -2014 4132 3829 5708 168 27 11 chr2 193508657 193509380 -57178474 + L1PA16 LINE L1 4132 4842 -1324 2218 136 28 3 chr2 193509380 193509733 -57178121 - THE1B LTR MaLR -2 362 1 5708 168 27 11 chr2 193509733 193511016 -57176838 + L1PA16 LINE L1 4842 6166 0 468 264 0 0 chr2 193511016 193511126 -57176728 - L1M4 LINE L1 -2315 3831 3722 367 321 21 0 chr2 193511121 193511261 -57176593 + L1MC/D LINE L1 5585 5727 -2081 * 1462 206 0 0 chr2 193511358 193511611 -57176243 - AluJb SINE Alu -59 253 1 455 360 86 16 chr2 193511734 193512232 -57175622 - L2 LINE L2 -174 3139 2616 249 224 0 17 chr2 193512357 193512415 -57175439 - L2 LINE L2 0 3272 3216 1106 226 111 15 chr2 193517851 193518192 -57169662 + MLT1A2 LTR MaLR 1 374 0 1984 121 46 26 chr2 193519148 193519455 -57168399 + AluSq SINE Alu 1 313 0 2523 205 6 58 chr2 193519720 193520257 -57167597 + MLT2B3 LTR ERVL 44 552 -2 377 298 74 8 chr2 193520257 193520367 -57167487 - MLT1E1 LTR MaLR -536 118 1 674 135 9 0 chr2 193520367 193520478 -57167376 - L1ME2 LINE L1 -312 5852 5741 630 310 76 5 chr2 193520485 193520682 -57167172 + MIR SINE MIR 52 262 0 1984 141 7 0 chr2 193520787 193521085 -57166769 - AluSx SINE Alu -12 300 1 27 29 0 0 chr2 193524140 193524174 -57163680 + AT_rich Low_complexity Low_complexity 1 34 0 842 228 0 6 chr2 193524764 193524931 -57162923 - FRAM SINE Alu 0 166 1 1501 156 25 22 chr2 193525857 193526132 -57161722 + AluJo SINE Alu 16 291 -21 27 49 0 0 chr2 193526453 193526494 -57161360 + AT_rich Low_complexity Low_complexity 1 41 0 196 376 122 15 chr2 193528570 193528775 -57159079 - L2 LINE L2 -343 2971 2745 2385 84 0 0 chr2 193529339 193529647 -57158207 - AluSx SINE Alu -4 308 1 2015 118 26 20 chr2 193530029 193530335 -57157519 + AluSx SINE Alu 1 308 -4 264 263 135 57 chr2 193530598 193531093 -57156761 - L1M4 LINE L1 -3040 3106 2573 2279 81 7 3 chr2 193531220 193531515 -57156339 - AluY SINE Alu -15 296 1 5685 29 0 0 chr2 193531613 193532277 -57155577 + L1PA4 LINE L1 5489 6152 -3 331 315 100 57 chr2 193532406 193532936 -57154918 - L1M4 LINE L1 -812 5334 4782 276 288 40 40 chr2 193532957 193533179 -57154675 - L1M4 LINE L1 -1407 4739 4518 1237 138 24 118 chr2 193533185 193533538 -57154316 - L1MA4 LINE L1 -331 5969 5657 1023 325 69 19 chr2 193533863 193534513 -57153341 - ERVL LTR ERVL -3402 2362 1680 1551 186 29 29 chr2 193535065 193535377 -57152477 + AluJo SINE Alu 1 312 0 921 106 17 17 chr2 193535377 193535556 -57152298 + (GGAGA)n Simple_repeat Simple_repeat 2 180 0 445 103 13 13 chr2 193535596 193535674 -57152180 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 32 43 0 0 chr2 193536157 193536203 -57151651 + AT_rich Low_complexity Low_complexity 1 46 0 24 0 0 0 chr2 193536590 193536614 -57151240 + AT_rich Low_complexity Low_complexity 1 24 0 1815 260 11 38 chr2 193536824 193537446 -57150408 + L1MA8 LINE L1 7 1169 -5858 1327 241 10 20 chr2 193537541 193538017 -57149837 + L1MA8 LINE L1 1812 2292 -4745 * 9407 186 58 28 chr2 193538014 193538298 -57149556 + L1MA8 LINE L1 3502 3776 -3330 2447 97 6 0 chr2 193538298 193538609 -57149245 + AluSp SINE Alu 1 313 0 9407 186 58 28 chr2 193538609 193540694 -57147160 + L1MA8 LINE L1 3776 5943 -1163 2675 129 27 19 chr2 193540689 193541170 -57146684 + L1MA8 LINE L1 6387 6871 -389 * 2280 154 32 2 chr2 193541170 193541576 -57146278 + MSTA LTR MaLR 1 388 -8 1386 134 9 0 chr2 193541576 193541807 -57146047 + MSTA-int LTR MaLR 3 235 -1416 350 82 82 16 chr2 193541809 193541870 -57145984 + MER4A LTR ERV1 34 98 -566 1503 125 31 79 chr2 193541870 193542233 -57145621 + MER4A LTR ERV1 261 664 0 7090 163 16 69 chr2 193542233 193543717 -57144137 + MSTA-int LTR MaLR 246 1370 -1 2183 149 66 17 chr2 193543718 193543893 -57143961 + MSTA LTR MaLR 1 166 -262 2267 121 0 0 chr2 193543893 193544190 -57143664 + AluSg SINE Alu 1 297 -13 2183 149 66 17 chr2 193544190 193544422 -57143432 + MSTA LTR MaLR 166 428 0 1560 191 11 29 chr2 193544422 193544804 -57143050 + L1MA8 LINE L1 6867 7241 -10 35317 79 10 7 chr2 193545935 193551721 -57136133 + L1PA5 LINE L1 179 5980 -174 1527 40 0 0 chr2 193551718 193551920 -57135934 + L1PA5 LINE L1 5019 5220 -926 * 1418 46 0 0 chr2 193551920 193552093 -57135761 + L1PA5 LINE L1 5981 6154 0 3410 98 6 10 chr2 193552093 193552588 -57135266 + L1PA11 LINE L1 5677 6172 -2 707 186 131 0 chr2 193552852 193553013 -57134841 - MER5A DNA MER1_type -1 188 4 50 0 0 0 chr2 193553528 193553578 -57134276 + AT_rich Low_complexity Low_complexity 1 50 0 2376 210 140 18 chr2 193553579 193554359 -57133495 + L1ME1 LINE L1 5274 6148 -18 966 285 108 15 chr2 193554359 193554909 -57132945 + L2 LINE L2 2699 3311 -2 1870 152 71 0 chr2 193555807 193556130 -57131724 - MER7A DNA MER2_type -1 345 2 578 225 90 54 chr2 193557653 193557875 -57129979 + MIR SINE MIR 33 262 0 2030 134 13 0 chr2 193557995 193558302 -57129552 - AluSx SINE Alu -1 311 1 398 332 126 62 chr2 193558573 193558995 -57128859 - L2 LINE L2 -11 3261 2813 245 351 62 31 chr2 193559301 193559526 -57128328 - L2 LINE L2 -567 2747 2516 332 292 60 36 chr2 193559527 193559695 -57128159 - L2 LINE L2 -943 2371 2200 380 250 144 75 chr2 193560633 193560821 -57127033 - MIR SINE MIR -13 249 49 250 283 35 121 chr2 193560856 193561054 -57126800 - L2 LINE L2 -86 3186 3006 1242 190 82 7 chr2 193561059 193561364 -57126490 + L1MD3 LINE L1 7658 7985 -10 384 209 38 19 chr2 193562058 193562163 -57125691 - HsTC2 DNA Tc2 -1788 110 4 2692 177 60 2 chr2 193562209 193562728 -57125126 - MER44D DNA MER2_type 0 605 2 1983 113 47 3 chr2 193563415 193563716 -57124138 + THE1B LTR MaLR 1 314 -50 532 132 44 11 chr2 193563770 193563861 -57123993 + AluSq/x SINE Alu 14 107 -206 247 111 0 0 chr2 193563862 193563898 -57123956 + THE1B LTR MaLR 320 355 0 258 308 75 0 chr2 193564293 193564426 -57123428 + MER103 DNA DNA 15 157 -9 320 192 101 40 chr2 193565590 193565689 -57122165 + MER5C DNA MER1_type 3 107 -217 242 152 0 0 chr2 193565713 193565759 -57122095 + MER5C DNA MER1_type 226 271 -53 207 88 0 0 chr2 193565898 193565932 -57121922 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1288 127 201 18 chr2 193565938 193566167 -57121687 - AluSx SINE Alu -36 276 6 336 288 49 26 chr2 193566734 193567001 -57120853 + L1MC/D LINE L1 5258 5530 -2278 551 248 7 36 chr2 193567200 193567337 -57120517 - L2 LINE L2 -8 3305 3173 2290 72 27 10 chr2 193567833 193568126 -57119728 + AluY SINE Alu 1 298 -13 936 183 35 45 chr2 193568433 193568635 -57119219 + AluJo SINE Alu 1 200 -112 246 288 32 40 chr2 193568643 193568768 -57119086 + MARNA DNA Mariner 411 534 -52 270 326 31 0 chr2 193568807 193568905 -57118949 - MER5A DNA MER1_type -50 139 39 247 271 14 14 chr2 193569003 193569073 -57118781 - MER5B DNA MER1_type -3 175 106 211 266 294 11 chr2 193569520 193569697 -57118157 - L2 LINE L2 -6 3307 3081 303 287 148 0 chr2 193569712 193569834 -57118020 - L2 LINE L2 -417 2897 2758 2174 57 0 8 chr2 193570075 193570339 -57117515 - AluY SINE Alu -10 301 40 2112 122 14 0 chr2 193570518 193570813 -57117041 + AluSx SINE Alu 1 299 -13 269 141 127 14 chr2 193571288 193571359 -57116495 - L1ME4a LINE L1 -25 6096 6018 335 247 0 0 chr2 193571719 193571796 -57116058 + L1ME2 LINE L1 5395 5471 -693 1157 216 94 34 chr2 193571831 193572279 -57115575 + L1ME2 LINE L1 5621 6095 -69 2381 89 3 0 chr2 193572515 193572818 -57115036 + AluSq SINE Alu 1 304 -9 2235 97 10 0 chr2 193573480 193573778 -57114076 - AluSx SINE Alu -11 301 1 428 340 118 0 chr2 193575288 193575491 -57112363 - MIR SINE MIR -24 238 12 2036 125 3 7 chr2 193576066 193576361 -57111493 - AluJb SINE Alu -18 294 1 249 196 20 0 chr2 193576876 193576927 -57110927 + MER3 DNA MER1_type 158 209 0 692 276 159 19 chr2 193576937 193577681 -57110173 - L1M4 LINE L1 -1576 4570 3723 27 0 0 0 chr2 193577695 193577722 -57110132 + AT_rich Low_complexity Low_complexity 1 27 0 234 183 0 50 chr2 193577731 193577791 -57110063 - L1M4 LINE L1 -2582 3564 3508 1132 104 186 0 chr2 193579010 193579203 -57108651 + MER30 DNA MER1_type 1 229 -1 196 342 81 27 chr2 193581001 193581112 -57106742 - MIR SINE MIR -64 144 28 432 307 86 0 chr2 193581221 193581384 -57106470 - MIR SINE MIR -1 261 85 218 231 15 15 chr2 193582512 193582577 -57105277 + T-rich Low_complexity Low_complexity 2 66 0 1741 116 35 67 chr2 193582608 193582954 -57104900 - MER44D DNA MER2_type -1 608 4 4430 86 16 25 chr2 193584238 193584910 -57102944 - THE1B-int LTR MaLR -914 666 1 2219 119 22 35 chr2 193584910 193585279 -57102575 - THE1B LTR MaLR 0 364 1 3254 161 75 36 chr2 193585279 193585888 -57101966 - L1MD2 LINE L1 -268 6091 5444 1745 158 18 4 chr2 193585888 193586167 -57101687 - AluJb SINE Alu -21 291 9 3254 161 75 36 chr2 193586167 193586293 -57101561 - L1MD2 LINE L1 -915 5444 5324 857 96 32 8 chr2 193586328 193586453 -57101401 - FRAM SINE Alu -31 145 18 942 132 0 14 chr2 193586504 193586648 -57101206 - FLAM_C SINE Alu -1 142 1 354 219 82 55 chr2 193587860 193588006 -57099848 + L2 LINE L2 1821 1970 -1344 512 317 35 102 chr2 193588352 193588746 -57099108 + L2 LINE L2 2856 3223 -49 2055 121 0 7 chr2 193588935 193589257 -57098597 - AluSx SINE Alu 0 312 1 428 276 37 16 chr2 193589364 193589553 -57098301 - MIR SINE MIR -58 204 10 764 45 65 0 chr2 193589844 193589999 -57097855 + (TA)n Simple_repeat Simple_repeat 2 166 0 279 54 0 0 chr2 193590059 193590096 -57097758 + (CA)n Simple_repeat Simple_repeat 2 38 0 1908 167 17 0 chr2 193590152 193590451 -57097403 - AluJb SINE Alu -8 304 1 295 338 38 3 chr2 193590628 193590771 -57097083 + MIR3 SINE MIR 40 189 -19 384 313 9 9 chr2 193590869 193590984 -57096870 - MIR SINE MIR -131 131 17 264 343 33 102 chr2 193591114 193591446 -57096408 + L2 LINE L2 2918 3226 -46 1044 289 97 86 chr2 193591620 193592489 -57095365 + L2 LINE L2 1775 2652 -662 1360 95 6 0 chr2 193592556 193592735 -57095119 + AluSg/x SINE Alu 120 299 -13 466 297 17 76 chr2 193592743 193592982 -57094872 + L2 LINE L2 2730 2982 -331 1681 208 35 30 chr2 193592982 193593376 -57094478 - MSTD LTR MaLR 0 396 1 466 297 17 76 chr2 193593376 193593462 -57094392 + L2 LINE L2 2982 3313 0 21 0 0 0 chr2 193594554 193594575 -57093279 + AT_rich Low_complexity Low_complexity 1 21 0 317 125 114 0 chr2 193596085 193596173 -57091681 - MER69 DNA AcHobo -51 2475 2378 * 515 206 50 21 chr2 193596171 193596312 -57091542 - MER69 DNA AcHobo -1081 145 1 1208 39 0 0 chr2 193596528 193596683 -57091171 + L1P LINE L1 1 155 -5991 2291 96 0 7 chr2 193596745 193597046 -57090808 + AluSc SINE Alu 1 299 -10 682 259 36 0 chr2 193597928 193598094 -57089760 + MER5B DNA MER1_type 2 173 -5 240 262 0 83 chr2 193598116 193598200 -57089654 + MER5B DNA MER1_type 34 110 -68 1483 143 91 43 chr2 193598201 193598551 -57089303 + THE1C LTR MaLR 9 375 0 314 270 0 0 chr2 193598551 193598625 -57089229 + MER5B DNA MER1_type 105 178 0 2129 99 44 0 chr2 193598770 193599063 -57088791 - AluSx SINE Alu -6 306 1 357 314 97 29 chr2 193599114 193599289 -57088565 - MIR3 SINE MIR -7 201 15 313 391 38 5 chr2 193599934 193600146 -57087708 + L3 LINE CR1 587 805 -772 401 271 37 0 chr2 193600420 193600527 -57087327 + L3 LINE CR1 1319 1429 -148 642 256 25 12 chr2 193600942 193601102 -57086752 + MIR SINE MIR 8 169 -93 677 88 44 9 chr2 193601219 193601333 -57086521 - AluSq/x SINE Alu -194 118 1 32 75 0 0 chr2 193603030 193603097 -57084757 + AT_rich Low_complexity Low_complexity 1 67 0 391 375 70 14 chr2 193604481 193604766 -57083088 + L2 LINE L2 1698 1998 -1316 206 323 89 13 chr2 193604953 193605050 -57082804 + MIR SINE MIR 62 165 -43 196 326 0 0 chr2 193607275 193607321 -57080533 - L2 LINE L2 -87 3185 3140 248 332 156 18 chr2 193607459 193607681 -57080173 - L2 LINE L2 -237 3035 2786 1873 122 0 0 chr2 193608960 193609205 -57078649 + AluSx SINE Alu 53 297 -15 1259 176 23 11 chr2 193610746 193611007 -57076847 - L1MD2 LINE L1 -12 6347 6084 1850 129 111 21 chr2 193611007 193611341 -57076513 - THE1B LTR MaLR 0 364 1 6586 104 3 5 chr2 193611341 193612309 -57075545 - THE1B-int LTR MaLR 0 1580 615 265 318 56 16 chr2 193613306 193613432 -57074422 + L2 LINE L2 3137 3267 -5 27 0 0 0 chr2 193614528 193614555 -57073299 + AT_rich Low_complexity Low_complexity 1 27 0 2230 237 114 33 chr2 193614556 193615508 -57072346 - HAL1 LINE L1 -15 2492 1463 489 331 43 36 chr2 193615538 193615816 -57072038 - L2 LINE L2 -4 3309 3030 310 250 0 38 chr2 193615796 193615876 -57071978 - L2 LINE L2 -516 2798 2722 * 819 244 115 11 chr2 193615894 193616252 -57071602 - HAL1 LINE L1 -1245 1262 943 1363 142 263 9 chr2 193616252 193616425 -57071429 - Tigger2a DNA MER2_type -2274 434 306 2145 123 7 13 chr2 193616425 193616734 -57071120 + AluSx SINE Alu 1 307 -5 1363 142 263 9 chr2 193616734 193616906 -57070948 - Tigger2a DNA MER2_type -2402 306 1 819 244 115 11 chr2 193616906 193617005 -57070849 - HAL1 LINE L1 -1564 943 601 1092 278 49 14 chr2 193617103 193617470 -57070384 - HAL1 LINE L1 -2114 393 14 379 255 0 43 chr2 193617506 193617600 -57070254 + MIR3 SINE MIR 114 203 -5 571 224 52 52 chr2 193619211 193619443 -57068411 + MER46C DNA MER2_type 13 244 -94 1455 217 34 12 chr2 193619693 193620020 -57067834 + MLT1A1 LTR MaLR 1 334 -31 783 192 20 7 chr2 193620093 193620239 -57067615 - AluJo SINE Alu -119 193 46 1269 148 131 7 chr2 193620270 193620688 -57067166 - L1MB8 LINE L1 -16 6162 5546 232 158 70 0 chr2 193620698 193620755 -57067099 - L1M4b LINE L1 -5834 1025 965 1329 154 56 25 chr2 193620822 193621108 -57066746 - L1MC1 LINE L1 -15 6318 6024 1144 112 0 27 chr2 193621108 193621295 -57066559 - L1M4b LINE L1 -5884 975 794 804 211 69 77 chr2 193621308 193621806 -57066048 - L1M4b LINE L1 -6140 719 111 1999 121 7 10 chr2 193621806 193622104 -57065750 - AluSx SINE Alu -15 297 1 804 211 69 77 chr2 193622104 193622212 -57065642 - L1M4b LINE L1 -6748 111 4 258 181 213 69 chr2 193622257 193622392 -57065462 - L1MC5 LINE L1 -464 7497 7334 1048 187 33 77 chr2 193622392 193622729 -57065125 - MER33 DNA MER1_type -1 323 2 258 181 213 69 chr2 193622729 193622753 -57065101 - L1MC5 LINE L1 -627 7334 7315 21 57 0 0 chr2 193622846 193622881 -57064973 + AT_rich Low_complexity Low_complexity 1 35 0 255 261 46 24 chr2 193623511 193623624 -57064230 - MIR SINE MIR -61 147 34 285 277 20 40 chr2 193623749 193623850 -57064004 + MIR SINE MIR 45 143 -65 378 223 160 0 chr2 193624597 193624691 -57063163 + MIR3 SINE MIR 89 197 -11 346 284 124 35 chr2 193625164 193625333 -57062521 + MIR3 SINE MIR 18 201 -7 317 243 59 37 chr2 193626407 193626543 -57061311 + MIR3 SINE MIR 61 199 -9 443 311 94 17 chr2 193626854 193627089 -57060765 - MIR SINE MIR 0 262 10 617 177 61 173 chr2 193627754 193628011 -57059843 + LTR68 LTR ERV1 329 613 -127 239 0 32 0 chr2 193628011 193628042 -57059812 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2217 96 7 0 chr2 193628044 193628335 -57059519 - AluSg SINE Alu -12 298 6 617 177 61 173 chr2 193628335 193628465 -57059389 + LTR68 LTR ERV1 614 740 0 210 376 50 0 chr2 193628914 193629015 -57058839 - MIR SINE MIR -144 118 13 308 24 24 0 chr2 193630323 193630364 -57057490 + (TTTTC)n Simple_repeat Simple_repeat 4 45 0 1940 167 3 3 chr2 193630374 193630686 -57057168 - AluJb SINE Alu 0 312 1 4553 110 58 34 chr2 193631833 193632576 -57055278 + Tigger3b DNA MER2_type 179 903 -2125 368 40 20 0 chr2 193632576 193632626 -57055228 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1542 134 19 63 chr2 193632626 193632889 -57054965 - AluJb SINE Alu -27 285 35 2081 111 4 0 chr2 193632896 193633176 -57054678 + AluSp SINE Alu 1 281 -32 198 0 0 0 chr2 193633178 193633200 -57054654 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 4553 110 58 34 chr2 193633200 193633353 -57054501 + Tigger3b DNA MER2_type 908 1102 -129 940 173 6 6 chr2 193633353 193633532 -57054322 - Tigger1 DNA MER2_type 0 2418 2240 1177 138 45 97 chr2 193633538 193633807 -57054047 - Tigger1 DNA MER2_type -2068 350 96 1903 164 0 17 chr2 193634161 193634460 -57053394 - AluJb SINE Alu -18 294 1 227 277 25 50 chr2 193634596 193634715 -57053139 - MLT1H LTR MaLR -387 162 47 1139 61 0 0 chr2 193635127 193635259 -57052595 - AluY SINE Alu -179 132 1 2034 148 0 3 chr2 193635333 193635636 -57052218 + AluSx SINE Alu 1 302 -10 1853 216 75 62 chr2 193635777 193636310 -57051544 + MLT1F LTR MaLR 2 541 -1 320 315 8 8 chr2 193637012 193637142 -57050712 + L1P LINE L1 3625 3754 -2392 836 273 83 60 chr2 193637380 193637860 -57049994 - L2 LINE L2 -1228 2086 1596 660 304 195 11 chr2 193637861 193638230 -57049624 + L2 LINE L2 1079 1515 -1799 2214 154 5 16 chr2 193638460 193638837 -57049017 + THE1C LTR MaLR 3 375 0 1648 92 12 0 chr2 193638837 193639087 -57048767 + THE1C-int LTR MaLR 1 253 -1327 610 105 53 18 chr2 193639083 193639197 -57048657 + THE1C-int LTR MaLR 1463 1580 0 * 1561 182 101 20 chr2 193639197 193639544 -57048310 + THE1C LTR MaLR 1 375 0 38 39 0 0 chr2 193640563 193640615 -57047239 + AT_rich Low_complexity Low_complexity 1 52 0 2251 109 7 0 chr2 193640624 193640918 -57046936 + AluSq SINE Alu 1 296 -17 445 274 108 24 chr2 193640933 193641145 -57046709 - L1ME4a LINE L1 -256 5865 5636 2220 88 7 0 chr2 193641968 193642262 -57045592 + AluSq SINE Alu 1 296 -17 219 36 0 0 chr2 193642314 193642342 -57045512 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 219 100 0 0 chr2 193642572 193642602 -57045252 - MIR3 SINE MIR -24 184 155 191 296 0 0 chr2 193642680 193642734 -57045120 - MIR SINE MIR -57 151 98 736 190 7 0 chr2 193642993 193643130 -57044724 - FLAM_C SINE Alu -5 138 1 2039 79 29 7 chr2 193646633 193646913 -57040941 - AluSg SINE Alu -19 291 6 850 43 62 0 chr2 193647814 193648028 -57039826 + (TA)n Simple_repeat Simple_repeat 1 227 0 183 361 190 6 chr2 193648071 193648229 -57039625 + MIR SINE MIR 58 244 -18 397 293 155 17 chr2 193650339 193650520 -57037334 - L3 LINE CR1 -469 1108 903 623 193 43 29 chr2 193650528 193650668 -57037186 - L2 LINE L2 0 3313 3172 1173 285 118 7 chr2 193650843 193651206 -57036648 + L2 LINE L2 116 540 -2774 441 0 0 0 chr2 193651206 193651255 -57036599 + (CA)n Simple_repeat Simple_repeat 2 50 0 1173 285 118 7 chr2 193651255 193651340 -57036514 + L2 LINE L2 540 614 -2700 632 261 169 38 chr2 193651323 193651584 -57036270 + L2 LINE L2 1324 1618 -1696 * 455 330 80 10 chr2 193651700 193651900 -57035954 + MIR SINE MIR 43 256 -6 24 32 0 0 chr2 193652237 193652268 -57035586 + AT_rich Low_complexity Low_complexity 1 31 0 23 92 0 0 chr2 193652530 193652595 -57035259 + AT_rich Low_complexity Low_complexity 1 65 0 463 268 8 41 chr2 193652661 193652784 -57035070 + L2 LINE L2 3195 3313 0 383 176 15 0 chr2 193653560 193653628 -57034226 + Tigger2 DNA MER2_type 1 69 -2649 * 2630 127 35 2 chr2 193653626 193654051 -57033803 + Tigger2 DNA MER2_type 2280 2718 0 21 0 0 0 chr2 193654087 193654108 -57033746 + AT_rich Low_complexity Low_complexity 1 21 0 2405 88 0 0 chr2 193654686 193654983 -57032871 + AluY SINE Alu 1 297 -14 182 219 109 62 chr2 193656472 193656536 -57031318 - L2 LINE L2 -20 3252 3186 * 194 298 70 0 chr2 193656505 193656562 -57031292 - L2 LINE L2 -56 3257 3197 2146 184 33 47 chr2 193658060 193658572 -57029282 + MLT1D LTR MaLR 1 505 0 2407 93 0 0 chr2 193659969 193660282 -57027572 - AluSq SINE Alu 0 313 1 1072 168 103 0 chr2 193660389 193660603 -57027251 - MLT1C LTR MaLR 0 467 232 2439 93 62 6 chr2 193661328 193661683 -57026171 - THE1C LTR MaLR 0 375 1 291 54 0 0 chr2 193661716 193661753 -57026101 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 189 326 21 42 chr2 193661863 193661958 -57025896 + L2 LINE L2 3163 3255 -17 205 321 83 0 chr2 193661997 193662081 -57025773 + L2 LINE L2 3160 3250 -63 489 351 30 5 chr2 193663142 193663344 -57024510 + MIR SINE MIR 7 213 -49 201 74 0 0 chr2 193663428 193663455 -57024399 + (T)n Simple_repeat Simple_repeat 1 27 0 661 138 39 0 chr2 193663483 193663613 -57024241 - L1MB7 LINE L1 0 6184 6050 22 70 0 0 chr2 193663613 193663656 -57024198 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 193663953 193663976 -57023878 + AT_rich Low_complexity Low_complexity 1 23 0 408 292 79 35 chr2 193664891 193665057 -57022797 + L1MC4a LINE L1 4490 4668 -1478 2233 106 0 0 chr2 193665057 193665359 -57022495 + AluSx SINE Alu 1 302 -10 408 292 79 35 chr2 193665359 193665394 -57022460 + L1MC4a LINE L1 4668 4700 -1446 588 290 173 5 chr2 193665518 193665732 -57022122 - MIR SINE MIR -4 258 9 596 310 128 12 chr2 193666146 193666637 -57021217 + L1MC4a LINE L1 5381 5928 -1880 257 246 51 25 chr2 193666665 193666783 -57021071 + HAL1b LINE L1 1210 1330 -18 183 42 0 0 chr2 193666783 193666807 -57021047 + (A)n Simple_repeat Simple_repeat 1 24 0 199 280 20 0 chr2 193667018 193667068 -57020786 + L2 LINE L2 3242 3292 -21 226 290 41 41 chr2 193669058 193669203 -57018651 - HAL1b LINE L1 -437 911 767 1234 184 56 49 chr2 193669280 193669568 -57018286 - AluJo SINE Alu -21 291 2 2128 136 7 7 chr2 193669882 193670190 -57017664 + AluSx SINE Alu 3 310 -2 266 283 160 37 chr2 193670428 193670834 -57017020 - HAL1 LINE L1 -1241 1266 811 2317 79 0 3 chr2 193671321 193671613 -57016241 - AluSg SINE Alu -15 295 5 283 339 109 6 chr2 193671759 193671933 -57015921 + MIR SINE MIR 5 196 -66 22 56 0 0 chr2 193672861 193672897 -57014957 + AT_rich Low_complexity Low_complexity 1 36 0 806 260 98 37 chr2 193673578 193673655 -57014199 + Charlie8 DNA MER1_type 35 106 -2311 2026 119 3 0 chr2 193673655 193673968 -57013886 + AluSx SINE Alu 1 314 0 806 260 98 37 chr2 193673968 193674349 -57013505 + Charlie8 DNA MER1_type 106 523 -1894 22 70 0 0 chr2 193675580 193675623 -57012231 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr2 193677188 193677210 -57010644 + AT_rich Low_complexity Low_complexity 1 22 0 21 82 0 0 chr2 193677995 193678044 -57009810 + AT_rich Low_complexity Low_complexity 1 49 0 1712 137 0 4 chr2 193678047 193678296 -57009558 + AluJb SINE Alu 60 307 -5 26 74 0 0 chr2 193678399 193678453 -57009401 + AT_rich Low_complexity Low_complexity 1 54 0 2512 61 0 0 chr2 193679554 193679849 -57008005 + AluY SINE Alu 1 295 -16 436 278 59 83 chr2 193680860 193681019 -57006835 - L2 LINE L2 0 3313 3163 276 30 0 0 chr2 193681019 193681052 -57006802 + (TG)n Simple_repeat Simple_repeat 2 34 0 436 278 59 83 chr2 193681052 193681180 -57006674 - L2 LINE L2 -150 3163 3033 2492 281 149 12 chr2 193681414 193682340 -57005514 - L2 LINE L2 -1499 1815 763 457 145 172 34 chr2 193682340 193682486 -57005368 + L1MA5A LINE L1 6125 6293 -4 22 0 0 0 chr2 193683173 193683195 -57004659 + AT_rich Low_complexity Low_complexity 1 22 0 2345 68 7 3 chr2 193683201 193683493 -57004361 + AluY SINE Alu 1 293 -18 353 186 0 12 chr2 193684934 193685020 -57002834 + (TA)n Simple_repeat Simple_repeat 1 85 0 226 300 0 0 chr2 193685022 193685112 -57002742 + L1MC4 LINE L1 6614 6703 -1339 * 247 272 0 0 chr2 193685046 193685138 -57002716 - L1MC4 LINE L1 -1339 6703 6612 301 278 11 22 chr2 193685861 193685951 -57001903 + 7SK RNA RNA 8 96 -97 23 0 0 0 chr2 193686427 193686450 -57001404 + AT_rich Low_complexity Low_complexity 1 23 0 437 358 23 11 chr2 193687153 193687329 -57000525 + MIR3 SINE MIR 21 198 -10 300 289 65 58 chr2 193688542 193688740 -56999114 + MIR SINE MIR 19 216 -46 207 69 0 0 chr2 193688874 193688903 -56998951 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 244 387 36 63 chr2 193688908 193689130 -56998724 - L2 LINE L2 -62 3210 2995 348 265 12 0 chr2 193690765 193690848 -56997006 + MIR3 SINE MIR 122 205 -3 21 0 0 0 chr2 193691376 193691397 -56996457 + AT_rich Low_complexity Low_complexity 1 21 0 376 138 0 195 chr2 193691479 193691602 -56996252 + MER20 DNA MER1_type 1 99 -120 311 266 221 6 chr2 193692215 193692373 -56995481 - L2 LINE L2 -16 3297 3106 1905 149 24 10 chr2 193692607 193692902 -56994952 - AluJo SINE Alu -13 299 1 204 184 20 20 chr2 193693094 193693143 -56994711 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 189 0 0 0 chr2 193695757 193695778 -56992076 + (CCG)n Simple_repeat Simple_repeat 1 21 0 188 269 108 0 chr2 193696408 193696501 -56991353 - MIR3 SINE MIR -3 205 103 188 303 0 66 chr2 193698141 193698217 -56989637 - L3 LINE CR1 -323 1254 1184 351 65 0 0 chr2 193698639 193698685 -56989169 + (CA)n Simple_repeat Simple_repeat 1 46 0 956 217 27 0 chr2 193698755 193698976 -56988878 + L1MB5 LINE L1 5941 6167 -7 213 344 83 32 chr2 193699255 193699412 -56988442 - L3b LINE CR1 -215 1368 1204 823 280 35 16 chr2 193700199 193700456 -56987398 - MIR SINE MIR 0 262 1 23 0 0 0 chr2 193700931 193700954 -56986900 + AT_rich Low_complexity Low_complexity 1 23 0 484 273 87 25 chr2 193701470 193701631 -56986223 + MIR3 SINE MIR 3 173 -35 2356 72 0 38 chr2 193701982 193702301 -56985553 - AluY SINE Alu -1 310 4 2115 104 7 0 chr2 193703333 193703613 -56984241 - AluSx SINE Alu -18 294 13 5871 147 36 26 chr2 193704409 193705116 -56982738 - L1MA4 LINE L1 -4 6296 5597 2227 113 131 11 chr2 193705116 193705498 -56982356 - MSTA LTR MaLR 0 428 1 5871 147 36 26 chr2 193705498 193705738 -56982116 - L1MA4 LINE L1 -703 5597 5361 2198 114 7 0 chr2 193705738 193706046 -56981808 + AluSp SINE Alu 1 310 -3 5871 147 36 26 chr2 193706046 193707199 -56980655 - L1MA4 LINE L1 -939 5361 4154 442 268 161 31 chr2 193707400 193707624 -56980230 + MIR SINE MIR 4 256 -6 411 297 0 0 chr2 193708127 193708228 -56979626 + L2 LINE L2 3172 3272 0 233 204 215 0 chr2 193708310 193708403 -56979451 - MLT1J LTR MaLR 0 511 399 310 314 20 64 chr2 193708465 193708669 -56979185 - MLT1L LTR MaLR -231 384 190 1278 155 0 10 chr2 193708763 193708970 -56978884 + AluJb SINE Alu 93 297 -15 1618 166 79 7 chr2 193709654 193709944 -56977910 + AluJo SINE Alu 1 311 -1 234 0 0 0 chr2 193709947 193709973 -56977881 + (CAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr2 193710785 193710813 -56977041 + AT_rich Low_complexity Low_complexity 1 28 0 2587 151 32 26 chr2 193710881 193711345 -56976509 + MLT1C LTR MaLR 1 467 0 294 50 0 0 chr2 193712039 193712079 -56975775 + (GA)n Simple_repeat Simple_repeat 1 40 0 405 253 11 11 chr2 193712143 193712238 -56975616 - MIR SINE MIR -56 206 112 24 32 0 0 chr2 193712444 193712475 -56975379 + AT_rich Low_complexity Low_complexity 1 31 0 596 262 8 0 chr2 193712485 193712607 -56975247 + FLAM_A SINE Alu 1 123 -10 1906 118 0 126 chr2 193712851 193713248 -56974606 - MER7A DNA MER2_type -1 345 1 2036 109 0 0 chr2 193713483 193713748 -56974106 + AluSx SINE Alu 1 265 -47 274 336 39 39 chr2 193715942 193716046 -56971808 + L2 LINE L2 3151 3254 -18 3729 31 0 0 chr2 193716623 193717067 -56970787 + L1PA4 LINE L1 5710 6153 -2 389 130 0 0 chr2 193718195 193718249 -56969605 + Alu SINE Alu 238 291 -11 25 0 0 0 chr2 193719215 193719240 -56968614 + AT_rich Low_complexity Low_complexity 1 25 0 333 47 0 0 chr2 193719420 193719463 -56968391 + (TG)n Simple_repeat Simple_repeat 2 44 0 186 103 0 0 chr2 193720031 193720060 -56967794 + (TC)n Simple_repeat Simple_repeat 2 30 0 30 0 0 0 chr2 193720309 193720339 -56967515 + AT_rich Low_complexity Low_complexity 1 30 0 260 194 10 29 chr2 193720700 193720803 -56967051 + (TA)n Simple_repeat Simple_repeat 2 102 0 225 208 0 21 chr2 193722150 193722198 -56965656 + CT-rich Low_complexity Low_complexity 3 49 0 1670 182 4 0 chr2 193722345 193722660 -56965194 - AluJo SINE Alu 0 316 1 383 279 190 13 chr2 193722827 193722985 -56964869 + MIR3 SINE MIR 12 197 -11 345 24 0 0 chr2 193724341 193724383 -56963471 + (TG)n Simple_repeat Simple_repeat 1 42 0 22 0 0 0 chr2 193725631 193725653 -56962201 + AT_rich Low_complexity Low_complexity 1 22 0 251 286 137 30 chr2 193725958 193726126 -56961728 - L3b LINE CR1 -146 1437 1252 1287 177 174 47 chr2 193726195 193726580 -56961274 - Tigger2a DNA MER2_type 0 434 1 1776 225 52 9 chr2 193726873 193727318 -56960536 - L1MCa LINE L1 -5944 482 19 475 254 31 8 chr2 193727560 193727690 -56960164 + MER94 DNA DNA 2 134 0 1250 318 193 7 chr2 193727692 193728528 -56959326 - L2 LINE L2 -407 2907 1917 819 90 149 15 chr2 193728530 193728664 -56959190 - THE1C LTR MaLR -223 152 1 2125 114 3 14 chr2 193728785 193729082 -56958772 - AluSx SINE Alu -18 294 1 213 227 0 0 chr2 193729138 193729182 -56958672 - L2 LINE L2 -1378 1936 1893 477 0 0 0 chr2 193729182 193729235 -56958619 + (TA)n Simple_repeat Simple_repeat 2 54 0 38 0 0 0 chr2 193729354 193729392 -56958462 + AT_rich Low_complexity Low_complexity 1 38 0 229 232 159 86 chr2 193730598 193730749 -56957105 - MLT1J LTR MaLR -111 400 239 1831 133 37 0 chr2 193730750 193731051 -56956803 + AluSx SINE Alu 1 311 0 192 252 17 104 chr2 193731201 193731316 -56956538 + MIR SINE MIR 101 205 -57 24 0 0 0 chr2 193731728 193731752 -56956102 + AT_rich Low_complexity Low_complexity 1 24 0 25 65 0 0 chr2 193731874 193731920 -56955934 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr2 193732029 193732050 -56955804 + AT_rich Low_complexity Low_complexity 1 21 0 201 74 0 0 chr2 193732090 193732117 -56955737 + (A)n Simple_repeat Simple_repeat 1 27 0 186 103 0 0 chr2 193732239 193732268 -56955586 + (T)n Simple_repeat Simple_repeat 1 29 0 634 250 53 53 chr2 193732326 193732590 -56955264 + HAL1 LINE L1 32 295 -2212 328 322 8 0 chr2 193732658 193732779 -56955075 + HAL1 LINE L1 1734 1855 -652 246 254 0 0 chr2 193732834 193732889 -56954965 + Tigger7 DNA MER2_type 1 55 -678 * 650 107 157 29 chr2 193732886 193733026 -56954828 + Tigger7 DNA MER2_type 2231 2388 -103 2073 146 9 3 chr2 193733036 193733379 -56954475 + MER47A DNA MER2_type 22 366 0 723 123 0 0 chr2 193733379 193733483 -56954371 + Tigger7 DNA MER2_type 2484 2587 0 1722 98 13 0 chr2 193733501 193733761 -56954093 + AluSc SINE Alu 44 306 0 306 247 229 0 chr2 193733775 193733945 -56953909 + HAL1 LINE L1 2071 2279 -228 1827 146 0 0 chr2 193734184 193734471 -56953383 - AluSx SINE Alu -25 287 1 361 330 0 17 chr2 193734854 193734972 -56952882 + CT-rich Low_complexity Low_complexity 1 116 0 213 300 50 0 chr2 193735082 193735162 -56952692 - MIR3 SINE MIR 0 208 125 1168 157 89 20 chr2 193735288 193735581 -56952273 + MER33 DNA MER1_type 1 313 -11 234 282 70 0 chr2 193735787 193735858 -56951996 - MIR SINE MIR -91 117 42 218 204 61 0 chr2 193735945 193735994 -56951860 - L2 LINE L2 -8 3305 3254 1896 137 0 0 chr2 193736206 193736462 -56951392 + AluSx SINE Alu 1 256 -56 31 76 0 0 chr2 193736462 193736528 -56951326 + AT_rich Low_complexity Low_complexity 1 66 0 594 288 136 57 chr2 193736947 193737513 -56950341 - L1M4 LINE L1 -2333 3813 3203 1918 156 13 10 chr2 193737520 193737827 -56950027 + AluJb SINE Alu 1 308 -4 792 270 60 40 chr2 193739092 193739344 -56948510 + MIR SINE MIR 6 262 0 2379 60 0 17 chr2 193740174 193740473 -56947381 - AluY SINE Alu -17 294 1 186 156 0 0 chr2 193740623 193740655 -56947199 - L2 LINE L2 -79 3234 3203 1058 363 31 10 chr2 193740761 193741282 -56946572 - L2 LINE L2 -685 2629 2098 510 242 0 24 chr2 193741336 193741460 -56946394 - MIR SINE MIR -110 152 32 22 0 0 0 chr2 193741665 193741687 -56946167 + AT_rich Low_complexity Low_complexity 1 22 0 399 296 34 62 chr2 193741703 193741879 -56945975 + MIR SINE MIR 63 233 -29 23 0 0 0 chr2 193741881 193741904 -56945950 + AT_rich Low_complexity Low_complexity 1 23 0 21 89 0 0 chr2 193742156 193742212 -56945642 + AT_rich Low_complexity Low_complexity 1 56 0 379 281 24 42 chr2 193742250 193742417 -56945437 - L1ME LINE L1 -303 5818 5655 266 208 9 132 chr2 193742423 193742529 -56945325 + MER63 DNA MER1_type 4 722 -340 254 211 0 0 chr2 193742534 193742586 -56945268 + LTR30 LTR ERV1 1 52 -670 1528 120 39 5 chr2 193742586 193742852 -56945002 + LTR12 LTR ERV1 57 2017 -421 315 234 0 0 chr2 193742852 193742929 -56944925 + LTR30 LTR ERV1 544 620 -102 701 194 23 0 chr2 193742929 193743058 -56944796 + LTR12 LTR ERV1 355 486 -228 2408 139 14 9 chr2 193743118 193743550 -56944304 + L1MA8 LINE L1 5855 6288 -3 5450 185 10 30 chr2 193743760 193744778 -56943076 + L1PA15-16 LINE L1 2771 3758 -3091 9284 57 6 124 chr2 193744778 193746345 -56941509 + SVA Other Other 3 1383 -3 5450 185 10 30 chr2 193746345 193746625 -56941229 + L1PA15-16 LINE L1 3758 4042 -2807 1633 203 39 48 chr2 193746627 193747060 -56940794 + MER119 DNA MER1_type 154 582 -1 650 257 50 29 chr2 193747228 193747508 -56940346 + L1MC4a LINE L1 5704 5989 -1819 30 45 0 0 chr2 193747527 193747571 -56940283 + AT_rich Low_complexity Low_complexity 1 44 0 2195 110 3 0 chr2 193747574 193747865 -56939989 + AluSx SINE Alu 1 292 -20 270 252 0 42 chr2 193747898 193748017 -56939837 + L1MCc LINE L1 25 138 -6285 335 233 10 19 chr2 193748074 193748177 -56939677 + L1MCc LINE L1 266 367 -6056 275 213 50 7 chr2 193748180 193748321 -56939533 + (TA)n Simple_repeat Simple_repeat 2 148 0 6014 58 1 1 chr2 193748343 193749104 -56938750 + L1PA7 LINE L1 5393 6153 -1 348 259 0 0 chr2 193749133 193749241 -56938613 + L1M4 LINE L1 3508 3615 -2531 1127 138 31 18 chr2 193749241 193749466 -56938388 + MER93b LTR ERV1 1 228 -145 244 146 42 0 chr2 193749732 193749780 -56938074 + MER96 DNA MER1_type? 16 65 -110 241 175 88 38 chr2 193749771 193749851 -56938003 - MER96 DNA MER1_type? -91 84 1 * 1828 172 0 0 chr2 193751069 193751371 -56936483 + AluSx SINE Alu 1 302 -10 363 200 27 0 chr2 193751940 193752015 -56935839 - FRAM/FAM SINE Alu -94 81 5 599 234 68 17 chr2 193752366 193752601 -56935253 - LTR37B LTR ERV1 -6 462 216 319 155 202 0 chr2 193752794 193752878 -56934976 + MER53 DNA DNA 88 188 -1 259 350 172 23 chr2 193753752 193754055 -56933799 + L2 LINE L2 2380 2727 -587 247 286 31 41 chr2 193754172 193754270 -56933584 + MIR SINE MIR 48 144 -64 1143 111 6 6 chr2 193754659 193754821 -56933033 + AluJb SINE Alu 142 303 -9 2342 93 3 10 chr2 193755091 193755404 -56932450 - AluSp SINE Alu -2 311 1 1153 103 61 0 chr2 193756450 193756615 -56931239 + AluSg/x SINE Alu 123 297 -13 571 281 22 18 chr2 193756625 193756894 -56930960 + L1M4 LINE L1 5549 5812 -335 525 32 0 0 chr2 193757436 193757499 -56930355 + (TA)n Simple_repeat Simple_repeat 2 64 0 209 267 23 27 chr2 193757574 193757701 -56930153 + MIR SINE MIR 68 248 -14 1855 133 28 7 chr2 193760084 193760370 -56927484 + AluSx SINE Alu 1 292 -20 210 71 0 0 chr2 193760976 193761004 -56926850 + (TC)n Simple_repeat Simple_repeat 2 29 0 983 175 0 6 chr2 193761952 193762112 -56925742 + AluJb SINE Alu 1 159 -153 28 29 0 0 chr2 193762670 193762705 -56925149 + AT_rich Low_complexity Low_complexity 1 35 0 1688 228 123 63 chr2 193762776 193762911 -56924943 + MER21B LTR ERV1 39 164 -699 1500 159 34 44 chr2 193762911 193763206 -56924648 + AluJb SINE Alu 21 312 0 1688 228 123 63 chr2 193763206 193763799 -56924055 + MER21B LTR ERV1 164 811 -52 643 133 117 0 chr2 193764044 193764164 -56923690 + Tigger2a DNA MER2_type 1 134 -300 22 0 0 0 chr2 193765044 193765066 -56922788 + AT_rich Low_complexity Low_complexity 1 22 0 1129 292 74 11 chr2 193765121 193765593 -56922261 + L2 LINE L2 1893 2394 -920 595 347 96 25 chr2 193765764 193766202 -56921652 + L2 LINE L2 2804 3272 0 799 219 34 0 chr2 193766954 193767132 -56920722 + MER5A DNA MER1_type 5 188 -1 1640 118 115 11 chr2 193767282 193767561 -56920293 - AluSp SINE Alu -1 312 5 2404 147 52 0 chr2 193767632 193768034 -56919820 + MSTB LTR MaLR 3 425 -1 25 0 0 0 chr2 193768178 193768203 -56919651 + AT_rich Low_complexity Low_complexity 1 25 0 760 173 8 8 chr2 193769035 193769168 -56918686 - FLAM_C SINE Alu 0 133 1 10938 170 21 8 chr2 193769213 193769595 -56918259 - L1PB2 LINE L1 -3 6148 5772 723 211 0 0 chr2 193769595 193769728 -56918126 - FLAM_C SINE Alu 0 133 1 10938 170 21 8 chr2 193769728 193771081 -56916773 - L1PB2 LINE L1 -379 5772 4438 285 118 0 0 chr2 193771081 193771132 -56916722 + (TTTTA)n Simple_repeat Simple_repeat 2 52 0 10938 170 21 8 chr2 193771132 193772791 -56915063 - L1PB2 LINE L1 -1713 4438 2706 268 293 130 8 chr2 193773794 193773917 -56913937 + L2 LINE L2 2517 2654 -660 928 223 0 6 chr2 193774060 193774235 -56913619 + FAM SINE Alu 2 175 0 406 273 57 29 chr2 193774613 193774822 -56913032 - LTR16C LTR ERVL -34 457 243 2076 164 31 0 chr2 193774822 193775176 -56912678 + MLT1A1 LTR MaLR 1 365 0 292 376 12 43 chr2 193776290 193776452 -56911402 + L2 LINE L2 3099 3255 -17 1628 144 101 14 chr2 193776489 193776766 -56911088 + AluJo SINE Alu 1 301 -11 24 32 0 0 chr2 193776833 193776864 -56910990 + AT_rich Low_complexity Low_complexity 1 31 0 1142 137 69 49 chr2 193776927 193777131 -56910723 - AluJo SINE Alu -20 292 85 399 326 69 37 chr2 193777199 193777417 -56910437 - HAL1 LINE L1 -444 2063 1839 247 256 271 44 chr2 193777464 193777785 -56910069 - HAL1 LINE L1 -1622 885 492 277 135 39 0 chr2 193778690 193778742 -56909112 - MER49 LTR ERV1 0 923 870 2081 87 67 29 chr2 193778753 193779098 -56908756 - L1MA3 LINE L1 -1 6304 5947 219 36 0 0 chr2 193780050 193780078 -56907776 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 24 0 0 0 chr2 193780188 193780212 -56907642 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr2 193780369 193780405 -56907449 + AT_rich Low_complexity Low_complexity 1 36 0 2078 140 0 0 chr2 193781053 193781353 -56906501 - AluSx SINE Alu -11 301 2 259 213 67 13 chr2 193781562 193781637 -56906217 + MIR SINE MIR 119 197 -65 305 125 18 0 chr2 193782289 193782345 -56905509 + GA-rich Low_complexity Low_complexity 4 60 0 1209 184 104 52 chr2 193783166 193783492 -56904362 - MER2 DNA MER2_type 0 344 2 1533 174 43 20 chr2 193784095 193784400 -56903454 + AluJb SINE Alu 1 312 0 392 273 149 7 chr2 193784571 193784725 -56903129 + MIR SINE MIR 81 256 -6 225 222 0 0 chr2 193785681 193785744 -56902110 + (TA)n Simple_repeat Simple_repeat 1 63 0 231 244 37 73 chr2 193786268 193786350 -56901504 - MIR SINE MIR -80 182 104 235 276 172 23 chr2 193786433 193786520 -56901334 - MER5A DNA MER1_type -56 133 34 669 216 210 3 chr2 193786679 193786884 -56900970 + MIR SINE MIR 16 262 0 22 70 0 0 chr2 193786884 193786927 -56900927 + AT_rich Low_complexity Low_complexity 1 43 0 2754 137 15 13 chr2 193787166 193788020 -56899834 - L1 LINE L1 -3408 4157 3305 976 151 4 0 chr2 193788445 193788756 -56899098 - ALR/Alpha Satellite centromeric 0 312 1 883 187 32 112 chr2 193788984 193789385 -56898469 - LTR37B LTR ERV1 -4 464 96 188 293 38 75 chr2 193789420 193789526 -56898328 - L2 LINE L2 -1860 1454 1353 225 0 0 0 chr2 193790548 193790573 -56897281 + (T)n Simple_repeat Simple_repeat 1 25 0 538 253 59 30 chr2 193791071 193791273 -56896581 - L2 LINE L2 0 3313 3106 392 250 0 0 chr2 193791308 193791416 -56896438 - L1 LINE L1 -3221 3627 3520 286 141 16 31 chr2 193791391 193791455 -56896399 - L1 LINE L1 -6728 121 59 * 573 270 113 17 chr2 193791957 193792187 -56895667 + MIR SINE MIR 4 255 -7 277 171 155 64 chr2 193792750 193792937 -56894917 - L1MC4 LINE L1 -142 7900 7697 205 146 21 21 chr2 193792949 193792997 -56894857 + T-rich Low_complexity Low_complexity 2 49 0 217 277 0 0 chr2 193795192 193795275 -56892579 + T-rich Low_complexity Low_complexity 1 83 0 2117 105 0 20 chr2 193795633 193795937 -56891917 + AluSg SINE Alu 1 298 -12 2310 122 0 0 chr2 193796186 193796498 -56891356 + AluSq SINE Alu 1 312 -1 484 183 19 0 chr2 193796723 193796827 -56891027 + L1MB8 LINE L1 5664 5769 -409 2097 168 23 14 chr2 193796854 193797282 -56890572 + L1MB8 LINE L1 5747 6178 0 344 262 170 0 chr2 193797371 193797512 -56890342 + L1ME4a LINE L1 5957 6121 0 298 269 28 14 chr2 193797527 193797668 -56890186 + L1ME4a LINE L1 5960 6102 -19 300 294 88 15 chr2 193798249 193798385 -56889469 + L2 LINE L2 3168 3313 0 21 0 0 0 chr2 193798955 193798976 -56888878 + AT_rich Low_complexity Low_complexity 1 21 0 1718 179 23 3 chr2 193799064 193799365 -56888489 + AluSx SINE Alu 1 307 -5 351 196 37 0 chr2 193799869 193799976 -56887878 + GA-rich Low_complexity Low_complexity 2 112 0 557 272 50 25 chr2 193800401 193800603 -56887251 - L2 LINE L2 0 3313 3107 1771 162 3 26 chr2 193801041 193801343 -56886511 - AluSx SINE Alu -17 295 1 744 322 83 42 chr2 193801482 193802004 -56885850 + L2 LINE L2 2737 3269 -3 1128 159 9 48 chr2 193802296 193802443 -56885411 + MER20 DNA MER1_type 2 138 -81 3310 138 31 6 chr2 193802443 193802956 -56884898 + MER1A DNA MER1_type 2 527 0 1128 159 9 48 chr2 193802956 193803035 -56884819 + MER20 DNA MER1_type 138 219 0 1929 128 48 23 chr2 193803737 193804089 -56883765 + MER46B DNA MER2_type 1 236 0 191 314 0 0 chr2 193804485 193804536 -56883318 + MIR SINE MIR 8 58 -204 539 297 28 19 chr2 193804539 193804708 -56883146 - MIR SINE MIR -62 146 18 390 84 90 18 chr2 193804961 193805128 -56882726 + (TA)n Simple_repeat Simple_repeat 1 179 0 265 124 45 11 chr2 193805150 193805239 -56882615 + (TA)n Simple_repeat Simple_repeat 1 92 0 2264 100 0 0 chr2 193805239 193805528 -56882326 - AluSq SINE Alu -24 289 1 707 181 40 13 chr2 193806139 193806288 -56881566 - MER20 DNA MER1_type 0 219 67 285 347 32 0 chr2 193806345 193806469 -56881385 - MIR SINE MIR -55 207 80 2253 91 7 13 chr2 193806494 193806801 -56881053 - AluSq SINE Alu -8 305 1 432 309 11 34 chr2 193808219 193808397 -56879457 + MER5A DNA MER1_type 16 189 0 2167 139 25 33 chr2 193808561 193808928 -56878926 - THE1B LTR MaLR 0 364 1 280 317 0 24 chr2 193808963 193809045 -56878809 + MIR3 SINE MIR 76 155 -53 1844 155 0 24 chr2 193809367 193809663 -56878191 - AluJo SINE Alu -23 289 1 1104 329 140 19 chr2 193809833 193810799 -56877055 - L2 LINE L2 -9 3263 2181 484 191 0 0 chr2 193811119 193811213 -56876641 - AluSg/x SINE Alu -1 308 215 3496 177 13 11 chr2 193811319 193812080 -56875774 - L1 LINE L1 -808 5338 4576 4597 140 51 30 chr2 193812080 193812939 -56874915 - MER49 LTR ERV1 -46 877 1 427 285 135 12 chr2 193813729 193814048 -56873806 + L1M4 LINE L1 4477 4834 -1312 2267 94 0 0 chr2 193814609 193814897 -56872957 - AluSx SINE Alu -22 290 3 318 100 29 14 chr2 193815207 193815277 -56872577 + (TA)n Simple_repeat Simple_repeat 1 71 0 1802 166 4 0 chr2 193815321 193815599 -56872255 - AluJb SINE Alu -27 285 7 228 406 8 23 chr2 193816098 193816226 -56871628 - L2 LINE L2 0 3272 3147 1462 160 0 53 chr2 193817219 193817287 -56870567 + AluJb SINE Alu 47 117 -195 2232 128 0 0 chr2 193817287 193817592 -56870262 - AluSx SINE Alu -7 305 1 1462 160 0 53 chr2 193817592 193817785 -56870069 + AluJb SINE Alu 117 294 -18 385 283 171 16 chr2 193818918 193819105 -56868749 - MIR SINE MIR 0 262 47 33 29 0 57 chr2 193819439 193819509 -56868345 + AT_rich Low_complexity Low_complexity 1 66 0 450 284 79 21 chr2 193820063 193820253 -56867601 + L2 LINE L2 3113 3313 0 24 85 0 0 chr2 193820409 193820468 -56867386 + AT_rich Low_complexity Low_complexity 1 59 0 1181 190 0 35 chr2 193820652 193820884 -56866970 + AluJo SINE Alu 1 224 -88 26 30 0 0 chr2 193821928 193821961 -56865893 + AT_rich Low_complexity Low_complexity 1 33 0 287 240 178 14 chr2 193822272 193822418 -56865436 - LTR33 LTR ERVL -333 188 19 531 254 124 15 chr2 193822480 193822681 -56865173 + L2 LINE L2 3081 3303 -10 2284 143 29 80 chr2 193822893 193823217 -56864637 - L1MCa LINE L1 -4143 2283 2003 2025 116 3 24 chr2 193823217 193823509 -56864345 - AluSx SINE Alu -26 286 1 2284 143 29 80 chr2 193823509 193823798 -56864056 - L1MCa LINE L1 -4423 2003 1701 318 170 117 0 chr2 193823831 193823925 -56863929 - L1MCa LINE L1 -4859 1567 1463 3050 121 56 27 chr2 193824180 193824773 -56863081 - L1MA3 LINE L1 0 6305 5696 1694 129 39 24 chr2 193824773 193824999 -56862855 - L1MCa LINE L1 -4950 1476 1255 1824 152 13 16 chr2 193824999 193825308 -56862546 - AluJo SINE Alu -4 308 1 1694 129 39 24 chr2 193825308 193825609 -56862245 - L1MCa LINE L1 -5171 1255 848 24 0 0 0 chr2 193825788 193825812 -56862042 + AT_rich Low_complexity Low_complexity 1 24 0 564 250 53 53 chr2 193826384 193826648 -56861206 + HAL1 LINE L1 32 295 -2212 286 325 8 0 chr2 193826717 193826837 -56861017 + HAL1 LINE L1 1735 1855 -652 229 254 0 0 chr2 193826892 193826947 -56860907 + Tigger7 DNA MER2_type 1 55 -2432 * 611 107 157 29 chr2 193826944 193827084 -56860770 + Tigger7 DNA MER2_type 2231 2388 -103 1978 143 9 3 chr2 193827094 193827437 -56860417 + MER47A DNA MER2_type 22 366 0 723 123 0 0 chr2 193827437 193827541 -56860313 + Tigger7 DNA MER2_type 2384 2487 0 1796 94 8 0 chr2 193827559 193827820 -56860034 + AluSc SINE Alu 44 306 0 505 244 150 60 chr2 193827834 193828235 -56859619 + HAL1 LINE L1 2071 2507 0 1842 169 3 10 chr2 193829212 193829507 -56858347 + AluJb SINE Alu 1 293 -19 22 0 0 0 chr2 193829912 193829934 -56857920 + AT_rich Low_complexity Low_complexity 1 22 0 209 294 165 9 chr2 193830196 193830305 -56857549 + MIR SINE MIR 18 143 -119 31652 68 6 9 chr2 193830322 193833356 -56854498 + L1PA6 LINE L1 11 3051 -3103 2395 92 0 0 chr2 193833356 193833661 -56854193 + AluY SINE Alu 1 305 -6 31652 68 6 9 chr2 193833661 193836794 -56851060 + L1PA6 LINE L1 3051 6152 -2 192 152 30 0 chr2 193836797 193836830 -56851024 + MIR SINE MIR 151 184 -78 245 171 0 0 chr2 193836830 193836871 -56850983 + MER3 DNA MER1_type 2 42 -167 763 139 9 0 chr2 193836872 193836987 -56850867 + FLAM_C SINE Alu 2 117 -16 294 132 0 0 chr2 193836998 193837051 -56850803 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 279 54 0 0 chr2 193837051 193837088 -56850766 + (CA)n Simple_repeat Simple_repeat 2 38 0 307 206 14 27 chr2 193837090 193837163 -56850691 + MER3 DNA MER1_type 33 104 -105 2872 16 0 0 chr2 193837427 193837744 -56850110 - AluYb8 SINE Alu -1 317 1 467 229 133 21 chr2 193837747 193837935 -56849919 - Tigger8 DNA MER2_type -290 376 168 33 43 0 0 chr2 193838119 193838166 -56849688 + AT_rich Low_complexity Low_complexity 1 47 0 2359 87 7 0 chr2 193838941 193839241 -56848613 - AluSc SINE Alu -7 302 1 2168 127 0 0 chr2 193839688 193839980 -56847874 - AluSg SINE Alu -17 293 2 2294 99 20 0 chr2 193840758 193841062 -56846792 + AluSx SINE Alu 1 310 -2 2167 110 3 7 chr2 193841304 193841605 -56846249 + AluSc SINE Alu 3 302 -7 24 32 0 0 chr2 193841690 193841721 -56846133 + AT_rich Low_complexity Low_complexity 1 31 0 433 307 92 32 chr2 193842979 193843310 -56844544 + L2 LINE L2 2689 3311 -2 3896 246 127 35 chr2 193843687 193843985 -56843869 + L1MC4 LINE L1 6340 6609 -1433 405 0 0 0 chr2 193843985 193844030 -56843824 + (CA)n Simple_repeat Simple_repeat 2 46 0 3896 246 127 35 chr2 193844030 193844341 -56843513 + L1MC4 LINE L1 6609 6890 -1152 1983 167 0 0 chr2 193844341 193844647 -56843207 + AluJb SINE Alu 3 308 -4 3896 246 127 35 chr2 193844647 193845037 -56842817 + L1MC4 LINE L1 6890 7243 -799 693 193 17 0 chr2 193845037 193845156 -56842698 - FLAM_A SINE Alu -9 124 4 3896 246 127 35 chr2 193845156 193845692 -56842162 + L1MC4 LINE L1 7243 8019 -23 1082 122 89 22 chr2 193846079 193846259 -56841595 + AluJb SINE Alu 114 305 -7 1053 147 0 0 chr2 193847156 193847306 -56840548 - FRAM SINE Alu -23 153 4 372 43 0 0 chr2 193848398 193848444 -56839410 + (TG)n Simple_repeat Simple_repeat 1 46 0 180 256 0 0 chr2 193848905 193848948 -56838906 + MIR SINE MIR 218 260 -2 187 265 29 88 chr2 193849099 193849201 -56838653 + MIR SINE MIR 65 160 -102 189 0 0 0 chr2 193849472 193849493 -56838361 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 2269 105 10 0 chr2 193850091 193850396 -56837458 - AluSx SINE Alu -2 310 3 1663 163 7 20 chr2 193850432 193850726 -56837128 - AluJb SINE Alu -20 292 3 2271 112 0 3 chr2 193851108 193851412 -56836442 + AluSg SINE Alu 1 303 -7 240 179 0 0 chr2 193852287 193852326 -56835528 - MER5C DNA MER1_type -2 322 284 2287 179 117 108 chr2 193852370 193853151 -56834703 - L1MC4a LINE L1 -5 7803 7016 288 214 167 0 chr2 193853151 193853235 -56834619 - MER5C DNA MER1_type -225 99 2 1898 132 0 0 chr2 193853445 193853703 -56834151 + AluSx SINE Alu 36 293 -19 180 129 16 32 chr2 193853703 193853765 -56834089 + (TA)n Simple_repeat Simple_repeat 2 62 0 303 28 0 0 chr2 193855241 193855277 -56832577 + (TG)n Simple_repeat Simple_repeat 1 36 0 839 177 56 10 chr2 193855277 193855475 -56832379 - L1MC5 LINE L1 -35 7926 7720 2073 153 0 3 chr2 193855523 193855836 -56832018 + AluJb SINE Alu 1 312 0 28 48 0 0 chr2 193855898 193855940 -56831914 + AT_rich Low_complexity Low_complexity 1 42 0 186 288 15 45 chr2 193857901 193857967 -56829887 + L2 LINE L2 3199 3262 -10 2405 85 0 0 chr2 193858301 193858594 -56829260 - AluSc SINE Alu -16 293 1 2395 78 0 0 chr2 193859431 193859727 -56828127 - AluSp SINE Alu -17 296 1 747 200 77 0 chr2 193860849 193861019 -56826835 - MER5A DNA MER1_type 0 189 7 33 25 0 0 chr2 193861277 193861317 -56826537 + AT_rich Low_complexity Low_complexity 1 40 0 327 296 45 0 chr2 193861420 193861508 -56826346 + MER5B DNA MER1_type 77 168 -10 761 62 0 55 chr2 193861567 193861713 -56826141 + (CA)n Simple_repeat Simple_repeat 2 139 0 282 227 182 11 chr2 193861713 193861801 -56826053 - MER5B DNA MER1_type -73 105 3 318 214 0 0 chr2 193863129 193863185 -56824669 - MER91 DNA MER1_type -5 191 136 2109 100 43 0 chr2 193863607 193863722 -56824132 + AluSx SINE Alu 1 110 -202 705 12 0 0 chr2 193863722 193863804 -56824050 + (CTA)n Simple_repeat Simple_repeat 3 84 0 2109 100 43 0 chr2 193863804 193863968 -56823886 + AluSx SINE Alu 110 292 -20 24 0 0 0 chr2 193865431 193865455 -56822399 + AT_rich Low_complexity Low_complexity 1 24 0 1730 199 0 10 chr2 193865821 193866128 -56821726 + AluJb SINE Alu 1 304 -8 29 43 0 43 chr2 193866158 193866227 -56821627 + AT_rich Low_complexity Low_complexity 1 66 0 2085 102 25 0 chr2 193866448 193866754 -56821100 - AluSx SINE Alu 0 313 1 996 213 34 76 chr2 193866986 193867277 -56820577 - AluJo SINE Alu -27 285 7 2281 103 0 3 chr2 193867733 193868034 -56819820 + AluSg SINE Alu 1 300 -10 473 170 0 32 chr2 193868095 193868189 -56819665 + FLAM_A SINE Alu 41 131 -11 1848 136 7 17 chr2 193868623 193868917 -56818937 + AluSx SINE Alu 18 308 -4 22 70 0 0 chr2 193869218 193869261 -56818593 + AT_rich Low_complexity Low_complexity 1 43 0 22 88 0 0 chr2 193869673 193869730 -56818124 + AT_rich Low_complexity Low_complexity 1 57 0 1679 96 0 0 chr2 193870211 193870430 -56817424 - AluSg/x SINE Alu -12 298 80 1690 171 30 3 chr2 193871015 193871319 -56816535 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 193872367 193872390 -56815464 + AT_rich Low_complexity Low_complexity 1 23 0 527 133 11 11 chr2 193872615 193872705 -56815149 + HY4 scRNA scRNA 1 90 -3 207 0 0 0 chr2 193873839 193873862 -56813992 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 267 329 123 6 chr2 193875868 193876038 -56811816 + L2 LINE L2 2554 2743 -571 278 337 80 30 chr2 193876287 193876486 -56811368 - L2 LINE L2 -667 2647 2439 491 289 81 43 chr2 193876615 193876850 -56811004 - MIR SINE MIR -6 256 13 258 386 26 9 chr2 193876839 193876953 -56810901 + L2 LINE L2 3141 3256 -16 * 2195 145 85 15 chr2 193877084 193877255 -56810599 + MSTA LTR MaLR 1 159 -269 2268 98 7 0 chr2 193877255 193877551 -56810303 + AluSp SINE Alu 1 298 -15 2195 145 85 15 chr2 193877551 193877779 -56810075 + MSTA LTR MaLR 159 428 0 646 308 80 8 chr2 193877829 193878066 -56809788 - L2 LINE L2 -23 3290 3037 503 299 30 30 chr2 193878345 193878402 -56809452 - MIR SINE MIR -55 207 151 2318 83 0 7 chr2 193878402 193878704 -56809150 - AluY SINE Alu -11 300 1 503 299 30 30 chr2 193878704 193878843 -56809011 - MIR SINE MIR -110 152 11 5054 75 27 5 chr2 193878891 193879592 -56808262 - SVA Other Other 0 1386 690 551 234 141 70 chr2 193879594 193879665 -56808189 + MER102b DNA MER1_type 68 133 -1295 2256 99 3 3 chr2 193879665 193879967 -56807887 + AluSc SINE Alu 1 302 -7 551 234 141 70 chr2 193879967 193880151 -56807703 + MER102b DNA MER1_type 133 341 0 184 338 14 14 chr2 193882085 193882159 -56805695 - MIR SINE MIR -97 111 38 21 36 0 0 chr2 193882450 193882478 -56805376 + AT_rich Low_complexity Low_complexity 1 28 0 1007 51 0 44 chr2 193882478 193882615 -56805239 + AluSg/x SINE Alu 172 302 -8 527 238 205 0 chr2 193883085 193883270 -56804584 - MIR SINE MIR -28 234 12 28 29 0 0 chr2 193883940 193883975 -56803879 + AT_rich Low_complexity Low_complexity 1 35 0 2167 116 3 0 chr2 193883987 193884280 -56803574 - AluSg SINE Alu -16 294 1 186 336 114 23 chr2 193884338 193884469 -56803385 - L2 LINE L2 -5 3267 3125 2168 74 60 3 chr2 193884990 193885275 -56802579 - AluSc SINE Alu -8 301 1 3160 135 60 26 chr2 193885435 193885596 -56802258 - L1MB3 LINE L1 -8 6175 6021 2118 126 13 3 chr2 193885596 193885905 -56801949 + AluSx SINE Alu 1 312 0 3160 135 60 26 chr2 193885905 193886322 -56801532 - L1MB3 LINE L1 -162 6021 5577 881 297 157 24 chr2 193887609 193888111 -56799743 + L3 LINE CR1 726 1294 -283 1904 115 13 49 chr2 193888252 193888556 -56799298 + AluSx SINE Alu 1 293 -19 210 328 16 0 chr2 193888564 193888625 -56799229 + MIR3 SINE MIR 144 205 -3 1347 179 94 7 chr2 193888714 193889011 -56798843 + L1MD3 LINE L1 6885 7207 -788 376 319 35 0 chr2 193889133 193889249 -56798605 + L2 LINE L2 3190 3309 -4 243 287 200 7 chr2 193892003 193892153 -56795701 - L3b LINE CR1 -88 1495 1317 2212 87 3 3 chr2 193892601 193892887 -56794967 + AluSx SINE Alu 11 296 -16 284 271 59 51 chr2 193893150 193893268 -56794586 - MIR SINE MIR -104 158 40 652 173 0 9 chr2 193893332 193893442 -56794412 - FRAM SINE Alu -36 140 32 308 80 0 20 chr2 193893849 193893899 -56793955 + L1MA9 LINE L1 6264 6312 0 187 237 17 68 chr2 193896175 193896234 -56791620 + L2 LINE L2 2995 3050 -263 2166 87 29 0 chr2 193897278 193897554 -56790300 + AluSx SINE Alu 8 291 -21 2122 132 0 0 chr2 193897763 193898058 -56789796 + AluSx SINE Alu 1 295 -17 1566 141 31 19 chr2 193898088 193898344 -56789510 + AluJo SINE Alu 37 295 -17 993 197 5 20 chr2 193898345 193898543 -56789311 + AluJo SINE Alu 1 195 -117 318 310 109 52 chr2 193898733 193898962 -56788892 - L2 LINE L2 -510 2804 2563 332 287 26 0 chr2 193899021 193899136 -56788718 - MER94 DNA DNA -3 131 14 2199 151 8 0 chr2 193899136 193899494 -56788360 - MER46B DNA MER2_type 0 236 1 30 21 0 21 chr2 193900059 193900081 -56787773 + AT_rich Low_complexity Low_complexity 1 22 -25 1908 120 7 31 chr2 193900081 193900373 -56787481 - AluJb SINE Alu -27 285 1 30 21 0 21 chr2 193900373 193900398 -56787456 + AT_rich Low_complexity Low_complexity 22 47 0 439 118 0 0 chr2 193900925 193900993 -56786861 + L1MB7 LINE L1 6096 6163 -21 280 165 16 8 chr2 193901169 193901232 -56786622 - L1M4 LINE L1 -3381 2765 2707 267 293 130 8 chr2 193902230 193902353 -56785501 + L2 LINE L2 2517 2654 -660 928 223 0 6 chr2 193902496 193902671 -56785183 + FAM SINE Alu 2 175 0 2065 121 13 3 chr2 193902910 193903216 -56784638 + MER1A DNA MER1_type 221 529 0 413 183 14 0 chr2 193903224 193903295 -56784559 + MER20 DNA MER1_type 148 219 0 863 239 21 36 chr2 193904005 193904335 -56783519 + MER46B DNA MER2_type 1 200 -36 1064 90 42 0 chr2 193904617 193904783 -56783071 - AluSg SINE Alu -109 201 29 869 170 0 30 chr2 193904784 193904949 -56782905 - L1MB3 LINE L1 -54 6129 5970 21 0 0 0 chr2 193905546 193905567 -56782287 + AT_rich Low_complexity Low_complexity 1 21 0 243 262 103 148 chr2 193908083 193908346 -56779508 - L2 LINE L2 -33 3239 2989 2246 101 17 0 chr2 193908407 193908705 -56779149 + AluSx SINE Alu 1 303 -9 259 315 204 17 chr2 193908787 193909076 -56778778 - L2 LINE L2 -527 2787 2445 536 223 171 29 chr2 193909104 193909279 -56778575 + MIR SINE MIR 14 213 -49 2368 71 0 26 chr2 193909334 193909643 -56778211 + AluSq SINE Alu 1 301 -12 323 327 9 9 chr2 193909653 193909766 -56778088 - L2 LINE L2 -958 2356 2244 2375 169 32 28 chr2 193910522 193910985 -56776869 - MLT1C LTR MaLR 0 467 3 536 198 35 52 chr2 193911357 193911529 -56776325 + Charlie5 DNA MER1_type 2417 2585 -27 391 326 58 0 chr2 193911530 193911668 -56776186 + MIR SINE MIR 6 151 -111 231 179 0 0 chr2 193911683 193911722 -56776132 - MLT1A1 LTR MaLR -326 39 1 621 317 67 0 chr2 193912191 193912415 -56775439 - MIR SINE MIR -18 244 6 1030 154 141 57 chr2 193912416 193912715 -56775139 - MER33 DNA MER1_type 0 324 1 296 296 132 20 chr2 193913028 193913180 -56774674 - MIR SINE MIR -1 261 93 247 252 59 89 chr2 193914393 193914528 -56773326 + MIR SINE MIR 88 218 -44 491 250 51 87 chr2 193915048 193915182 -56772672 + MIR SINE MIR 60 186 -76 1990 134 17 0 chr2 193915182 193915480 -56772374 + AluSx SINE Alu 1 303 -9 491 250 51 87 chr2 193915480 193915541 -56772313 + MIR SINE MIR 186 248 -14 27 0 0 0 chr2 193915934 193915961 -56771893 + AT_rich Low_complexity Low_complexity 1 27 0 267 326 20 10 chr2 193916271 193916369 -56771485 + L2 LINE L2 3215 3313 0 342 123 0 0 chr2 193916511 193916568 -56771286 + (TA)n Simple_repeat Simple_repeat 2 58 0 349 249 131 85 chr2 193916593 193916633 -56771221 - MIR3 SINE MIR -63 145 108 2001 114 7 4 chr2 193916633 193916955 -56770899 - AluSx SINE Alu 0 323 1 349 249 131 85 chr2 193916955 193917079 -56770775 - MIR3 SINE MIR -100 108 15 643 254 68 6 chr2 193917086 193917263 -56770591 - MER5A DNA MER1_type 0 189 2 740 157 30 22 chr2 193917766 193917900 -56769954 - AluSq/x SINE Alu -178 135 1 1950 124 7 7 chr2 193917953 193918259 -56769595 - AluSx SINE Alu 0 306 1 1367 194 8 27 chr2 193918669 193918932 -56768922 + AluJo SINE Alu 11 268 -44 192 77 0 0 chr2 193919233 193919259 -56768595 + (TTCTG)n Simple_repeat Simple_repeat 1 26 0 272 304 82 37 chr2 193919350 193919485 -56768369 - MIR3 SINE MIR -17 191 51 2174 103 3 7 chr2 193919921 193920211 -56767643 + AluSx SINE Alu 1 289 -23 3159 149 30 22 chr2 193920216 193920808 -56767046 - L1MB4 LINE L1 -17 6163 5567 412 258 16 16 chr2 193920823 193920951 -56766903 + MER103 DNA DNA 39 166 0 249 333 35 26 chr2 193921033 193921147 -56766707 - MIR SINE MIR -70 138 24 215 344 10 31 chr2 193921219 193921315 -56766539 - MIR3 SINE MIR -110 98 5 1687 174 27 15 chr2 193921739 193922104 -56765750 - MER47B DNA MER2_type 0 418 1 189 0 0 0 chr2 193922602 193922623 -56765231 + (T)n Simple_repeat Simple_repeat 1 21 0 990 177 96 0 chr2 193923202 193923400 -56764454 - L1ME3 LINE L1 -53 6109 5893 270 243 165 78 chr2 193923500 193923706 -56764148 + LTR16A LTR ERVL 17 240 -210 320 272 11 0 chr2 193923718 193923810 -56764044 + LTR16A LTR ERVL 356 448 -2 185 263 0 0 chr2 193923826 193923864 -56763990 - MIR3 SINE MIR -54 154 117 23 33 0 0 chr2 193924161 193924191 -56763663 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 193924319 193924345 -56763509 + AT_rich Low_complexity Low_complexity 1 26 0 667 191 38 8 chr2 193924870 193925001 -56762853 - AluJo SINE Alu -176 136 2 22 0 0 0 chr2 193925452 193925474 -56762380 + AT_rich Low_complexity Low_complexity 1 22 0 251 286 137 30 chr2 193925779 193925947 -56761907 - L3b LINE CR1 -146 1437 1252 1471 161 174 44 chr2 193926016 193926400 -56761454 - Tigger2a DNA MER2_type 0 434 1 31 0 0 0 chr2 193928935 193928966 -56758888 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr2 193929007 193929035 -56758819 + AT_rich Low_complexity Low_complexity 1 28 0 362 216 0 29 chr2 193930048 193930150 -56757704 - L1MC5 LINE L1 -100 7861 7763 1905 171 3 0 chr2 193930231 193930541 -56757313 - AluJb SINE Alu -1 311 1 23 33 0 0 chr2 193930921 193930951 -56756903 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr2 193931163 193931205 -56756649 + AT_rich Low_complexity Low_complexity 1 42 0 1937 149 0 10 chr2 193932180 193932475 -56755379 - AluSx SINE Alu -20 292 1 267 79 0 0 chr2 193933288 193933326 -56754528 + (T)n Simple_repeat Simple_repeat 1 38 0 1984 92 55 4 chr2 193933408 193933681 -56754173 + AluSq SINE Alu 1 287 -26 467 265 173 11 chr2 193934589 193935132 -56752722 + L1MCc LINE L1 1179 1947 -4888 1847 148 3 30 chr2 193935150 193935454 -56752400 + AluSx SINE Alu 1 296 -16 323 310 41 21 chr2 193935468 193935613 -56752241 + L1MCc LINE L1 2014 2161 -4961 368 255 0 0 chr2 193935616 193935714 -56752140 + HsTC2c DNA Tc2 600 697 -32 669 290 51 18 chr2 193935723 193935866 -56751988 + L1MCc LINE L1 2174 2311 -4811 2229 112 13 0 chr2 193935866 193936171 -56751683 + AluSx SINE Alu 4 312 0 669 290 51 18 chr2 193936171 193936361 -56751493 + L1MCc LINE L1 2311 2518 -4604 331 238 123 43 chr2 193936408 193936643 -56751211 + L1MCc LINE L1 2600 2853 -4269 233 273 60 80 chr2 193936684 193936834 -56751020 - L2 LINE L2 -460 2854 2708 183 409 51 11 chr2 193937077 193937253 -56750601 - L2 LINE L2 -890 2424 2242 373 304 9 0 chr2 193937259 193937371 -56750483 + HsTC2c DNA Tc2 4 116 -613 1167 208 117 13 chr2 193937429 193937737 -56750117 + HsTC2c DNA Tc2 359 698 -31 210 246 18 0 chr2 193937749 193937806 -56750048 - L2 LINE L2 -1081 2233 2176 301 376 176 20 chr2 193938418 193938660 -56749194 - L2 LINE L2 -4 3309 3106 2285 84 7 7 chr2 193938660 193938959 -56748895 + AluY SINE Alu 1 299 -12 301 376 176 20 chr2 193938959 193939120 -56748734 - L2 LINE L2 -207 3106 2843 1695 126 54 88 chr2 193939169 193939557 -56748297 + THE1C LTR MaLR 1 375 0 1526 188 29 0 chr2 193939766 193940038 -56747816 - AluJo SINE Alu -30 282 3 248 315 169 28 chr2 193940063 193940489 -56747365 - HAL1 LINE L1 -785 1722 1237 536 182 67 48 chr2 193940658 193940823 -56747031 + MER112 DNA MER1_type 15 182 -78 1269 130 58 5 chr2 193940851 193941058 -56746796 + MER20 DNA MER1_type 1 218 -1 228 180 0 80 chr2 193941091 193941141 -56746713 + MER5B DNA MER1_type 2 47 -131 1589 160 96 36 chr2 193942106 193942438 -56745416 + MLT1A1 LTR MaLR 2 353 -12 190 416 62 0 chr2 193942603 193942716 -56745138 - L2 LINE L2 -5 3308 3189 4841 152 47 5 chr2 193942767 193943742 -56744112 - L1PB4 LINE L1 -22 6134 5127 472 276 112 39 chr2 193943908 193944140 -56743714 - MIR SINE MIR -6 256 8 1548 144 32 61 chr2 193944147 193944460 -56743394 - AluJo SINE Alu -8 304 1 182 306 83 14 chr2 193944520 193944592 -56743262 - MIR SINE MIR -82 180 104 2306 92 0 10 chr2 193945019 193945325 -56742529 + AluSc SINE Alu 1 303 -6 2172 108 0 0 chr2 193945371 193945658 -56742196 + AluSx SINE Alu 1 287 -25 212 31 62 0 chr2 193947057 193947089 -56740765 + T-rich Low_complexity Low_complexity 2 35 0 21 0 0 0 chr2 193947097 193947118 -56740736 + AT_rich Low_complexity Low_complexity 1 21 0 1663 72 0 5 chr2 193947118 193947341 -56740513 - L1PA5 LINE L1 -1 6153 5932 33 0 0 0 chr2 193948226 193948259 -56739595 + AT_rich Low_complexity Low_complexity 1 33 0 192 97 0 0 chr2 193949678 193949709 -56738145 + (TTG)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr2 193950767 193950788 -56737066 + AT_rich Low_complexity Low_complexity 1 21 0 228 233 0 0 chr2 193951206 193951249 -56736605 + L3 LINE CR1 1532 1574 -3 307 126 40 0 chr2 193951368 193951424 -56736430 - L1MA6 LINE L1 -588 5717 5660 2958 150 16 40 chr2 193951424 193951759 -56736095 + L1MA6 LINE L1 5736 6056 -244 2348 60 0 4 chr2 193951759 193952068 -56735786 - AluY SINE Alu 0 308 1 2958 150 16 40 chr2 193952068 193952304 -56735550 + L1MA6 LINE L1 6056 6296 -4 1289 296 97 4 chr2 193953115 193953568 -56734286 + L2 LINE L2 792 1286 -2028 1214 239 94 9 chr2 193953570 193953900 -56733954 + L2 LINE L2 2439 2796 -518 565 225 77 7 chr2 193953914 193954091 -56733763 - MER58B DNA MER1_type -2 339 1 1269 258 129 13 chr2 193954093 193954543 -56733311 + L2 LINE L2 2810 3311 -2 187 241 175 102 chr2 193955082 193955219 -56732635 - L2 LINE L2 -546 2768 2622 24 0 0 0 chr2 193955610 193955634 -56732220 + AT_rich Low_complexity Low_complexity 1 24 0 712 126 10 0 chr2 193955634 193955737 -56732117 - AluSx SINE Alu -20 289 186 * 747 98 0 0 chr2 193955734 193955836 -56732018 - AluSx SINE Alu -171 141 40 1815 112 0 4 chr2 193956310 193956561 -56731293 - AluY SINE Alu -12 299 50 23 33 0 0 chr2 193956739 193956769 -56731085 + AT_rich Low_complexity Low_complexity 1 30 0 2233 87 28 0 chr2 193957152 193957438 -56730416 + AluSc SINE Alu 1 294 -15 358 251 173 34 chr2 193957809 193957988 -56729866 + MIR SINE MIR 59 262 0 199 246 53 114 chr2 193958080 193958194 -56729660 - L2 LINE L2 -296 2976 2870 1771 142 69 0 chr2 193958581 193958855 -56728999 - AluJo SINE Alu -19 293 1 1828 134 74 7 chr2 193959490 193959773 -56728081 + AluJb SINE Alu 3 304 -8 370 119 0 0 chr2 193961009 193961068 -56726786 - AluJo SINE Alu 0 302 244 926 150 7 26 chr2 193961077 193961230 -56726624 - AluJo SINE Alu -119 193 44 2576 173 80 7 chr2 193961466 193962014 -56725840 + L1MB8 LINE L1 5575 6162 -16 245 250 0 91 chr2 193962205 193962293 -56725561 - L2 LINE L2 -2 3311 3232 * 478 251 33 33 chr2 193962279 193962462 -56725392 + L2 LINE L2 2331 2513 -801 2161 120 3 3 chr2 193962834 193963135 -56724719 - AluSq SINE Alu -12 301 1 201 345 52 94 chr2 193963195 193963482 -56724372 + L2 LINE L2 2685 2959 -355 21 36 0 0 chr2 193963533 193963561 -56724293 + AT_rich Low_complexity Low_complexity 1 28 0 341 291 48 0 chr2 193963586 193963689 -56724165 + L2 LINE L2 3201 3308 -5 2379 170 0 5 chr2 193963955 193964360 -56723494 - MER57A LTR ERV1 0 403 1 480 300 111 19 chr2 193964928 193965160 -56722694 + MIR SINE MIR 10 261 -1 208 319 152 0 chr2 193966044 193966182 -56721672 + L2 LINE L2 1963 2121 -1193 1398 184 152 11 chr2 193966429 193966804 -56721050 - LTR56 LTR ERV1 0 445 18 240 200 0 0 chr2 193966807 193966857 -56720997 + (TA)n Simple_repeat Simple_repeat 1 50 0 2230 111 0 0 chr2 193966857 193967154 -56720700 - AluSx SINE Alu -7 305 9 231 295 185 62 chr2 193967473 193967700 -56720154 - MIR SINE MIR -6 256 2 2331 109 0 0 chr2 193968206 193968508 -56719346 + AluSx SINE Alu 1 302 -10 2147 137 0 0 chr2 193968696 193969002 -56718852 - AluSx SINE Alu -6 306 1 814 248 179 58 chr2 193969465 193969573 -56718281 - HAL1 LINE L1 -655 1852 1759 2067 136 24 0 chr2 193969573 193969868 -56717986 - AluSx SINE Alu -10 302 1 814 248 179 58 chr2 193969868 193969948 -56717906 - HAL1 LINE L1 -748 1759 1690 1628 149 48 30 chr2 193969948 193970074 -56717780 + AluJo SINE Alu 1 123 -189 2250 103 0 7 chr2 193970074 193970374 -56717480 + AluSx SINE Alu 1 298 -14 1628 149 48 30 chr2 193970374 193970542 -56717312 + AluJo SINE Alu 123 300 -12 814 248 179 58 chr2 193970542 193970696 -56717158 - HAL1 LINE L1 -817 1690 1556 2043 116 0 0 chr2 193970696 193970971 -56716883 - AluSg SINE Alu -2 308 34 814 248 179 58 chr2 193970971 193971424 -56716430 - HAL1 LINE L1 -951 1556 958 551 273 208 0 chr2 193972096 193972250 -56715604 + MER5A DNA MER1_type 4 189 0 23 33 0 0 chr2 193973701 193973731 -56714123 + AT_rich Low_complexity Low_complexity 1 30 0 377 277 93 7 chr2 193975597 193975742 -56712112 - MIR SINE MIR -47 161 1 208 288 163 0 chr2 193976803 193976883 -56710971 - MIR SINE MIR -109 153 61 1966 110 23 32 chr2 193976886 193977195 -56710659 - AluSq SINE Alu -2 311 6 2057 136 3 3 chr2 193977350 193977659 -56710195 - AluSq SINE Alu -2 311 3 22 56 0 0 chr2 193977734 193977770 -56710084 + AT_rich Low_complexity Low_complexity 1 36 0 24 67 0 0 chr2 193977985 193978030 -56709824 + AT_rich Low_complexity Low_complexity 1 45 0 753 160 137 98 chr2 193980046 193980403 -56707451 - L1MC5 LINE L1 -58 7903 7533 238 289 13 0 chr2 193980918 193980994 -56706860 + MIR SINE MIR 163 239 -23 180 250 0 0 chr2 193981402 193981450 -56706404 + T-rich Low_complexity Low_complexity 4 51 0 186 303 131 29 chr2 193981711 193981886 -56705968 - L2 LINE L2 -273 2999 2807 204 250 39 0 chr2 193982718 193982770 -56705084 - L2 LINE L2 0 3272 3219 822 263 86 4 chr2 193983047 193983279 -56704575 - MIR SINE MIR -10 252 2 420 299 47 8 chr2 193983288 193983415 -56704439 + MER5B DNA MER1_type 1 132 -46 1787 236 20 13 chr2 193983919 193984376 -56703478 - L1ME2 LINE L1 0 6164 5705 918 222 56 25 chr2 193984355 193984639 -56703215 - L1ME LINE L1 -3258 2822 2530 * 351 0 0 0 chr2 193984645 193984684 -56703170 + (T)n Simple_repeat Simple_repeat 1 39 0 577 225 139 10 chr2 193984737 193984990 -56702864 - L1ME LINE L1 -3813 2267 2020 993 237 109 101 chr2 193985183 193985312 -56702542 - L1ME LINE L1 -4566 1514 1388 2245 88 10 3 chr2 193985312 193985607 -56702247 + AluSx SINE Alu 1 297 -15 993 237 109 101 chr2 193985607 193986483 -56701371 - L1ME LINE L1 -4692 1388 526 230 208 0 97 chr2 193986669 193986741 -56701113 - L1ME LINE L1 -5549 521 457 472 324 28 24 chr2 193986779 193987032 -56700822 - L1ME LINE L1 -5723 347 94 237 33 0 0 chr2 193987039 193987069 -56700785 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2177 126 0 10 chr2 193987092 193987401 -56700453 - AluSx SINE Alu -6 306 1 2442 90 0 0 chr2 193988220 193988530 -56699324 + AluSg SINE Alu 1 310 0 432 0 0 0 chr2 193988532 193988580 -56699274 + (TA)n Simple_repeat Simple_repeat 2 49 0 401 221 171 93 chr2 193988756 193989141 -56698713 - L1MC5 LINE L1 -54 7907 7493 255 243 78 10 chr2 193989371 193989474 -56698380 - L1MC4a LINE L1 -632 7176 7067 23 33 0 0 chr2 193989535 193989565 -56698289 + AT_rich Low_complexity Low_complexity 1 30 0 681 315 98 17 chr2 193990481 193990716 -56697138 - MIR SINE MIR 0 262 9 239 226 57 0 chr2 193990929 193990982 -56696872 + L2 LINE L2 3255 3310 -3 342 333 77 27 chr2 193992715 193992792 -56695062 + MIR SINE MIR 52 124 -138 928 240 70 4 chr2 193992792 193993034 -56694820 - MIR SINE MIR -3 259 2 342 333 77 27 chr2 193993034 193993139 -56694715 + MIR SINE MIR 124 243 -19 2177 110 3 3 chr2 193993379 193993678 -56694176 + AluSx SINE Alu 1 299 -13 278 111 22 0 chr2 193994729 193994774 -56693080 - MSTB1 LTR MaLR -4 428 383 558 96 0 0 chr2 193994819 193994892 -56692962 - MSTB1 LTR MaLR -51 381 309 2145 164 57 59 chr2 193994893 193995060 -56692794 - MSTB-int LTR MaLR -1175 476 310 1463 118 45 5 chr2 193995060 193995281 -56692573 + MER30 DNA MER1_type 1 230 0 2145 164 57 59 chr2 193995281 193995590 -56692264 - MSTB-int LTR MaLR -1341 310 1 2378 140 52 5 chr2 193995590 193995997 -56691857 - MSTB LTR MaLR 0 426 1 23 0 0 0 chr2 193996038 193996061 -56691793 + AT_rich Low_complexity Low_complexity 1 23 0 1917 140 0 11 chr2 193996469 193996778 -56691076 - AluSg SINE Alu 0 306 1 1412 142 199 0 chr2 193997534 193997815 -56690039 + MER1B DNA MER1_type 1 337 0 200 261 221 33 chr2 193998875 193999116 -56688738 - L2 LINE L2 -1153 2161 1848 1237 199 4 12 chr2 193999116 193999357 -56688497 + MER8 DNA MER2_type 1 239 0 200 261 221 33 chr2 193999357 193999422 -56688432 - L2 LINE L2 -1466 1848 1797 2170 116 3 13 chr2 193999515 193999825 -56688029 + AluSx SINE Alu 1 307 -5 483 269 180 55 chr2 194000388 194000459 -56687395 + L2 LINE L2 2942 3003 -310 1564 169 27 14 chr2 194000459 194000755 -56687099 - AluJo SINE Alu -12 300 1 483 269 180 55 chr2 194000755 194001010 -56686844 + L2 LINE L2 3003 3309 -4 2099 104 24 0 chr2 194001845 194002134 -56685720 - AluSq SINE Alu -17 296 1 1760 90 41 38 chr2 194002975 194003265 -56684589 - AluSx SINE Alu -21 291 1 2566 83 143 0 chr2 194004187 194004594 -56683260 - MER4C LTR ERV1 0 465 1 650 121 0 10 chr2 194005052 194005151 -56682703 + MER4A LTR ERV1 1 98 -566 280 116 23 0 chr2 194005151 194005194 -56682660 + MER4A LTR ERV1 261 304 -360 4827 86 63 23 chr2 194005221 194005993 -56681861 - MER4C-int LTR ERV1 -89 6509 5707 295 133 0 0 chr2 194005993 194006038 -56681816 + MER4A LTR ERV1 620 664 0 4514 96 12 17 chr2 194006131 194006780 -56681074 - MER4A LTR ERV1 -14 650 5 838 242 16 0 chr2 194006928 194007114 -56680740 - MER5A DNA MER1_type 0 189 1 231 337 35 0 chr2 194007257 194007343 -56680511 + MIR3 SINE MIR 115 203 -5 22 35 0 0 chr2 194007782 194007811 -56680043 + AT_rich Low_complexity Low_complexity 1 29 0 572 174 0 0 chr2 194008627 194008725 -56679129 - MER5A DNA MER1_type -82 107 10 802 263 117 78 chr2 194008971 194009469 -56678385 + MLT1H1 LTR MaLR 42 595 0 2163 106 0 0 chr2 194009648 194009953 -56677901 - AluSq SINE Alu 0 305 1 196 381 78 52 chr2 194010272 194010542 -56677312 - L2 LINE L2 0 3272 2996 31475 104 22 55 chr2 194010837 194015058 -56672796 - L1PA7 LINE L1 -2 6152 2233 2270 100 7 0 chr2 194015058 194015367 -56672487 - AluY SINE Alu 0 311 1 31475 104 22 55 chr2 194015367 194017518 -56670336 - L1PA7 LINE L1 -3921 2233 12 390 247 13 0 chr2 194017549 194017626 -56670228 - MER2 DNA MER2_type 0 345 268 666 183 0 51 chr2 194017644 194017781 -56670073 - MER2 DNA MER2_type -215 130 1 25 110 0 0 chr2 194018485 194018594 -56669260 + AT_rich Low_complexity Low_complexity 1 109 0 25 65 0 0 chr2 194018785 194018831 -56669023 + AT_rich Low_complexity Low_complexity 1 46 0 968 176 12 0 chr2 194019705 194019870 -56667984 + AluSg/x SINE Alu 133 299 -13 35 41 0 0 chr2 194020717 194020766 -56667088 + AT_rich Low_complexity Low_complexity 1 49 0 505 342 82 8 chr2 194020792 194021035 -56666819 + MIR SINE MIR 2 262 0 1460 146 84 24 chr2 194021771 194022058 -56665796 + AluJb SINE Alu 1 304 -8 340 206 55 0 chr2 194022107 194022180 -56665674 - MIR SINE MIR -1 261 185 349 383 130 7 chr2 194022511 194022819 -56665035 + L2 LINE L2 2510 2855 -459 252 392 21 0 chr2 194022978 194023075 -56664779 + L2 LINE L2 2985 3083 -189 322 287 70 33 chr2 194023906 194024150 -56663704 - L1ME4a LINE L1 -268 5853 5601 255 224 48 24 chr2 194024336 194024461 -56663393 - L1ME4a LINE L1 -681 5440 5313 2782 118 14 11 chr2 194024536 194024975 -56662879 - MER83 LTR ERV1 -8 440 1 2127 132 3 0 chr2 194025171 194025482 -56662372 - AluSx SINE Alu 0 312 1 344 277 44 87 chr2 194025664 194025870 -56661984 + MIR SINE MIR 66 262 0 22 35 0 0 chr2 194027111 194027140 -56660714 + AT_rich Low_complexity Low_complexity 1 29 0 1919 146 13 3 chr2 194027488 194027804 -56660050 - L1PA16 LINE L1 -9 6157 5839 232 313 239 0 chr2 194028046 194028180 -56659674 - MIR SINE MIR -11 251 86 316 364 65 22 chr2 194028598 194028782 -56659072 + MIR SINE MIR 20 211 -51 210 308 192 23 chr2 194029907 194030079 -56657775 - MIR SINE MIR -13 249 49 420 222 118 0 chr2 194030124 194030259 -56657595 - L1ME4a LINE L1 -4 6117 5967 379 222 42 69 chr2 194030457 194030601 -56657253 - L1ME4a LINE L1 -259 5862 5723 316 237 108 50 chr2 194030728 194030867 -56656987 + L1ME4a LINE L1 5868 6014 -107 1039 288 89 29 chr2 194030867 194031527 -56656327 + L2 LINE L2 2604 3304 -9 26 74 0 0 chr2 194031565 194031619 -56656235 + AT_rich Low_complexity Low_complexity 1 54 0 4997 235 29 16 chr2 194031652 194032044 -56655810 - L1 LINE L1 -2740 3642 3257 2121 114 7 10 chr2 194032044 194032341 -56655513 - AluSx SINE Alu -16 296 1 4997 235 29 16 chr2 194032341 194033541 -56654313 - L1 LINE L1 -3125 3257 2025 21 57 0 0 chr2 194035671 194035706 -56652148 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr2 194036063 194036093 -56651761 + AT_rich Low_complexity Low_complexity 1 30 0 1987 141 0 3 chr2 194036103 194036409 -56651445 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr2 194036807 194036828 -56651026 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 194037288 194037309 -56650545 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 194038244 194038272 -56649582 + AT_rich Low_complexity Low_complexity 1 28 0 694 262 205 5 chr2 194038570 194038780 -56649074 - MIR SINE MIR -2 260 9 346 224 26 0 chr2 194039302 194039378 -56648476 - MIR SINE MIR -114 148 71 21 0 0 0 chr2 194039774 194039795 -56648059 + AT_rich Low_complexity Low_complexity 1 21 0 1895 197 75 25 chr2 194039942 194040161 -56647693 - L1MD1 LINE L1 -5 6237 6030 2221 115 23 0 chr2 194040161 194040466 -56647388 - AluSx SINE Alu 0 312 1 1895 197 75 25 chr2 194040466 194040729 -56647125 - L1MD1 LINE L1 -212 6030 5731 2711 163 82 24 chr2 194041594 194042261 -56645593 - L1MDa LINE L1 -3931 2610 1902 2167 182 47 11 chr2 194042308 194042775 -56645079 + L1MB5 LINE L1 5440 5923 -251 830 172 35 7 chr2 194042778 194042923 -56644931 + Tigger7 DNA MER2_type 4 152 -2335 502 186 12 0 chr2 194042929 194043015 -56644839 + Tigger7 DNA MER2_type 2501 2587 0 1033 203 21 21 chr2 194043015 194043251 -56644603 + L1MB5 LINE L1 5922 6157 -17 2283 80 18 15 chr2 194043259 194043585 -56644269 - L1PA8A LINE L1 0 6131 5805 211 301 14 14 chr2 194043685 194043758 -56644096 + CT-rich Low_complexity Low_complexity 4 76 0 844 272 61 20 chr2 194044037 194044434 -56643420 - MLT1J LTR MaLR -64 447 1 338 359 36 63 chr2 194044434 194044657 -56643197 - HAL1 LINE L1 -1919 588 372 1232 299 69 22 chr2 194045049 194045584 -56642270 - L2 LINE L2 -1179 2135 1576 475 337 191 21 chr2 194045689 194046318 -56641536 - L2 LINE L2 -7 3265 2534 1747 221 16 24 chr2 194046336 194046712 -56641142 - MER82 DNA MER2_type -21 632 260 2103 131 0 3 chr2 194046714 194047011 -56640843 + AluSx SINE Alu 3 298 -14 243 0 0 0 chr2 194048728 194048755 -56639099 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 398 184 184 0 chr2 194048756 194048843 -56639011 - MER82 DNA MER2_type -385 268 166 554 248 114 0 chr2 194049046 194049195 -56638659 - MER82 DNA MER2_type -486 167 2 710 280 109 55 chr2 194049228 194049881 -56637973 - L2 LINE L2 -816 2498 1811 2310 73 26 0 chr2 194050127 194050430 -56637424 - AluY SINE Alu 0 311 1 2372 57 20 10 chr2 194050430 194050727 -56637127 - AluY SINE Alu -11 300 1 1769 153 7 47 chr2 194050737 194051037 -56636817 - AluJo SINE Alu -23 289 2 1146 191 83 14 chr2 194051330 194051609 -56636245 - L1MD2 LINE L1 -17 8006 6241 720 174 230 0 chr2 194051612 194051773 -56636081 - MER3 DNA MER1_type 0 209 12 1157 242 26 33 chr2 194051788 194052189 -56635665 - L1MC4 LINE L1 -222 7563 7208 2316 67 3 10 chr2 194054240 194054540 -56633314 + AluSc SINE Alu 1 298 -11 693 149 116 48 chr2 194054904 194055210 -56632644 - L1MC4 LINE L1 -1 7807 7014 1411 167 4 24 chr2 194055219 194055470 -56632384 - AluJo SINE Alu -26 286 41 228 143 48 0 chr2 194055478 194055520 -56632334 - Alu SINE Alu -221 81 38 1383 158 12 21 chr2 194055523 194055763 -56632091 - AluJb SINE Alu -71 241 4 418 136 12 12 chr2 194055763 194055844 -56632010 - L1MC4 LINE L1 -282 7760 7680 1900 81 0 0 chr2 194056035 194056270 -56631584 + AluSg/x SINE Alu 66 300 -12 308 183 0 17 chr2 194056341 194056401 -56631453 - L1MC4a LINE L1 -745 7063 7005 933 149 0 19 chr2 194056417 194056571 -56631283 + AluJb SINE Alu 151 301 -11 419 167 26 0 chr2 194056571 194056649 -56631205 - L1MC4 LINE L1 -1020 7022 6943 353 277 62 18 chr2 194057122 194057234 -56630620 + L2 LINE L2 3156 3272 0 270 223 62 62 chr2 194057443 194057555 -56630299 + MER103 DNA DNA 42 153 -13 31 99 0 0 chr2 194058525 194058626 -56629228 + AT_rich Low_complexity Low_complexity 1 101 0 21 0 0 0 chr2 194058969 194058990 -56628864 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr2 194060104 194060130 -56627724 + (CA)n Simple_repeat Simple_repeat 2 27 0 361 314 171 0 chr2 194060208 194060348 -56627506 - MER5A DNA MER1_type 0 189 26 701 144 0 78 chr2 194060349 194060516 -56627338 - MER58 DNA MER1_type -3 2417 2264 1261 206 52 42 chr2 194060530 194060687 -56627167 + L1ME1 LINE L1 5776 5930 -236 1621 169 0 47 chr2 194060687 194061006 -56626848 + AluJo SINE Alu 1 304 -8 1261 206 52 42 chr2 194061006 194061178 -56626676 + L1ME1 LINE L1 5930 6108 -58 419 89 0 0 chr2 194061178 194061234 -56626620 + MLT1F LTR MaLR 199 254 -288 791 154 56 31 chr2 194061239 194061401 -56626453 + L1M3f LINE L1 11 176 -5152 * 6876 84 34 11 chr2 194061400 194061898 -56625956 + L1MA2 LINE L1 5285 5770 -534 2125 127 3 3 chr2 194061898 194062206 -56625648 + AluSx SINE Alu 1 308 -4 6876 84 34 11 chr2 194062206 194062704 -56625150 + L1MA2 LINE L1 5770 6304 0 6079 184 55 41 chr2 194062709 194063708 -56624146 + L1M3f LINE L1 161 1145 -5183 1707 141 35 10 chr2 194063708 194063842 -56624012 + AluY SINE Alu 1 130 -181 2408 90 0 0 chr2 194063842 194064141 -56623713 + AluY SINE Alu 1 299 -12 1707 141 35 10 chr2 194064141 194064296 -56623558 + AluY SINE Alu 130 297 -14 6079 184 55 41 chr2 194064296 194064502 -56623352 + L1M3f LINE L1 1145 1347 -4981 363 140 0 0 chr2 194064502 194064552 -56623302 + AluY SINE Alu 1 50 -252 1494 93 0 0 chr2 194064552 194064745 -56623109 + AluY SINE Alu 99 291 -20 6079 184 55 41 chr2 194064745 194065886 -56621968 + L1M3f LINE L1 1346 2550 -3778 22 79 0 0 chr2 194066521 194066559 -56621295 + AT_rich Low_complexity Low_complexity 1 38 0 1587 148 64 0 chr2 194066559 194066870 -56620984 - L1MA6 LINE L1 -8 6292 5962 376 272 112 8 chr2 194068371 194068496 -56619358 + MIR SINE MIR 8 145 -117 789 248 99 33 chr2 194068619 194069501 -56618353 + HAL1 LINE L1 810 1815 -692 1894 162 0 3 chr2 194069501 194069798 -56618056 + AluJo SINE Alu 1 296 -16 789 248 99 33 chr2 194069798 194070029 -56617825 + HAL1 LINE L1 1815 2029 -478 4528 141 34 37 chr2 194070254 194071112 -56616742 + L1PB4 LINE L1 5294 6148 -8 368 280 50 0 chr2 194072787 194072887 -56614967 - MIR SINE MIR -56 206 102 454 200 0 0 chr2 194073745 194073820 -56614034 + MER69 DNA AcHobo 1 75 -2451 555 191 14 64 chr2 194073853 194073994 -56613860 + MER69 DNA AcHobo 2389 2522 -4 1047 169 12 0 chr2 194074011 194074183 -56613671 + MER1B DNA MER1_type 1 174 -123 431 200 92 23 chr2 194075532 194075662 -56612192 + MER113 DNA MER1_type? 34 172 -349 1886 134 0 0 chr2 194075681 194075949 -56611905 + AluSx SINE Alu 1 268 -44 395 262 81 16 chr2 194076251 194076398 -56611456 - L1M4 LINE L1 -6219 427 2 2166 87 0 84 chr2 194076454 194076476 -56611378 - AluSq SINE Alu -6 307 285 210 118 0 0 chr2 194076476 194076510 -56611344 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 2166 87 0 84 chr2 194076510 194076822 -56611032 - AluSq SINE Alu -28 285 1 23 33 0 0 chr2 194077475 194077505 -56610349 + AT_rich Low_complexity Low_complexity 1 30 0 351 270 43 9 chr2 194077709 194077824 -56610030 + MIR SINE MIR 123 241 -21 7318 147 45 2 chr2 194079069 194080278 -56607576 - Tigger1 DNA MER2_type -1103 1315 55 3987 187 18 11 chr2 194080628 194080702 -56607152 + L1 LINE L1 2344 2416 -3730 1950 180 94 8 chr2 194080702 194081096 -56606758 + MSTA LTR MaLR 1 428 0 9855 157 10 7 chr2 194081096 194082741 -56605113 + MSTA-int LTR MaLR 1 1650 -1 2159 168 73 0 chr2 194082742 194083141 -56604713 + MSTA LTR MaLR 1 428 0 3987 187 18 11 chr2 194083141 194083890 -56603964 + L1 LINE L1 2415 3176 -2970 1254 223 29 4 chr2 194083901 194084139 -56603715 + MLT1F1 LTR MaLR 247 490 -77 257 361 8 54 chr2 194084645 194084775 -56603079 + MIR3 SINE MIR 42 165 -43 533 224 52 0 chr2 194084939 194085055 -56602799 + FLAM_C SINE Alu 1 122 -21 22 0 0 0 chr2 194085471 194085493 -56602361 + AT_rich Low_complexity Low_complexity 1 22 0 452 285 91 55 chr2 194085567 194085732 -56602122 + MIR SINE MIR 47 217 -45 21 0 0 0 chr2 194086074 194086095 -56601759 + AT_rich Low_complexity Low_complexity 1 21 0 302 252 144 27 chr2 194086112 194086223 -56601631 + MIR SINE MIR 30 153 -109 245 269 10 58 chr2 194087073 194087177 -56600677 - L1ME4a LINE L1 -71 6050 5952 21 82 0 0 chr2 194087402 194087451 -56600403 + AT_rich Low_complexity Low_complexity 1 49 0 722 204 21 70 chr2 194087643 194087829 -56600025 + MER8 DNA MER2_type 1 177 -62 1459 122 206 0 chr2 194087882 194088129 -56599725 + AluSg SINE Alu 2 299 -1 380 197 0 0 chr2 194088134 194088195 -56599659 - Tigger2 DNA MER2_type -2656 62 2 2314 98 10 0 chr2 194088233 194088539 -56599315 - AluSc SINE Alu 0 309 1 2312 100 3 0 chr2 194088638 194088937 -56598917 - AluSq SINE Alu -13 300 1 213 65 0 0 chr2 194088937 194088968 -56598886 + (T)n Simple_repeat Simple_repeat 1 31 0 498 148 0 65 chr2 194088986 194089094 -56598760 - HY1 scRNA scRNA -9 103 3 2277 104 3 7 chr2 194089804 194090112 -56597742 - AluSx SINE Alu -5 307 1 1977 192 32 73 chr2 194090364 194090926 -56596928 + MER34 LTR ERV1 4 542 0 226 320 51 0 chr2 194091799 194091877 -56595977 + L2 LINE L2 3173 3254 -18 2344 100 7 0 chr2 194091963 194092273 -56595581 + AluSq SINE Alu 1 312 -1 730 231 19 62 chr2 194092277 194092485 -56595369 - MIR SINE MIR -56 206 8 963 48 81 0 chr2 194093086 194093210 -56594644 - MER85 DNA T2_type -5 134 1 4427 132 18 34 chr2 194093561 194094336 -56593518 - L1PB4 LINE L1 -1 6155 5393 2802 10 0 0 chr2 194094773 194095078 -56592776 - AluYa5 SINE Alu -6 305 1 1871 166 0 14 chr2 194095197 194095492 -56592362 - AluJo SINE Alu -21 291 1 1543 121 9 0 chr2 194095568 194095806 -56592048 + AluSg SINE Alu 64 303 0 986 229 47 131 chr2 194096355 194096430 -56591424 + L1ME3 LINE L1 5148 5228 -934 2096 104 0 0 chr2 194096430 194096698 -56591156 - AluSx SINE Alu -39 273 6 986 229 47 131 chr2 194096698 194097514 -56590340 + L1ME3 LINE L1 5228 5951 -211 35 41 0 0 chr2 194097774 194097823 -56590031 + AT_rich Low_complexity Low_complexity 1 49 0 2282 98 0 3 chr2 194100240 194100535 -56587319 + AluSg SINE Alu 1 294 -16 1800 194 18 0 chr2 194100668 194101009 -56586845 + MER7A DNA MER2_type 1 345 -1 12093 112 21 24 chr2 194101539 194101804 -56586050 - Tigger1 DNA MER2_type -413 2005 1741 2355 77 0 7 chr2 194101804 194102104 -56585750 - AluY SINE Alu -13 298 1 12093 112 21 24 chr2 194102104 194102374 -56585480 - Tigger1 DNA MER2_type -677 1741 1472 1806 151 36 0 chr2 194102374 194102653 -56585201 - AluJb SINE Alu -13 299 11 12093 112 21 24 chr2 194102653 194104025 -56583829 - Tigger1 DNA MER2_type -946 1472 101 3709 138 11 25 chr2 194104025 194104952 -56582902 + L1PA16 LINE L1 5260 6150 -16 629 198 9 0 chr2 194104955 194105071 -56582783 - Tigger1 DNA MER2_type -2301 117 1 1525 205 102 20 chr2 194105072 194105472 -56582382 + L1MD2 LINE L1 5923 6355 -4 236 306 139 0 chr2 194105602 194105710 -56582144 + MLT1J LTR MaLR 39 161 -350 271 169 13 65 chr2 194105817 194105894 -56581960 + MLT1J LTR MaLR 327 399 -112 272 313 50 0 chr2 194106055 194106274 -56581580 + L1MEc LINE L1 1574 1987 -4620 1102 174 0 0 chr2 194106277 194106449 -56581405 + FAM SINE Alu 1 172 -3 315 294 170 25 chr2 194106604 194106839 -56581015 + L1MEc LINE L1 2230 2498 -4109 1553 206 0 7 chr2 194106865 194107147 -56580707 - AluJo SINE Alu -30 282 3 290 256 66 8 chr2 194107188 194107309 -56580545 + L1MEc LINE L1 2461 2588 -3838 24 91 0 0 chr2 194107448 194107514 -56580340 + AT_rich Low_complexity Low_complexity 1 66 0 1456 166 126 9 chr2 194107735 194108060 -56579794 + MLT1A1 LTR MaLR 3 365 0 1891 115 0 4 chr2 194108096 194108366 -56579488 + AluSg1 SINE Alu 39 307 -2 181 100 75 0 chr2 194108420 194108460 -56579394 + CT-rich Low_complexity Low_complexity 4 46 0 2018 134 23 7 chr2 194108470 194108776 -56579078 - AluJb SINE Alu -1 311 1 973 293 117 4 chr2 194109051 194109590 -56578264 - L1ME3A LINE L1 -218 5952 5353 41827 58 3 2 chr2 194109596 194115735 -56572119 - L1PA5 LINE L1 -3 6151 1 410 287 96 0 chr2 194115826 194115941 -56571913 - L2 LINE L2 -1 3271 3146 688 282 107 0 chr2 194116155 194116371 -56571483 - L2 LINE L2 -977 2337 2099 1668 160 25 0 chr2 194116429 194116710 -56571144 + MER47A DNA MER2_type 7 294 -72 2028 150 3 39 chr2 194116724 194116948 -56570906 - L1PA16 LINE L1 -33 6133 5925 2102 122 14 7 chr2 194116948 194117244 -56570610 + AluSx SINE Alu 1 298 -14 2028 150 3 39 chr2 194117244 194117378 -56570476 - L1PA16 LINE L1 -241 5925 5788 * 4153 176 25 17 chr2 194117375 194118948 -56568906 + L1PB4 LINE L1 4324 5911 -245 2092 132 14 0 chr2 194118948 194119244 -56568610 - AluSx SINE Alu -12 300 1 4153 176 25 17 chr2 194119244 194119287 -56568567 + L1PB4 LINE L1 5911 5952 -204 339 167 15 0 chr2 194119286 194119352 -56568502 - L1 LINE L1 -1827 4319 4253 * 5532 257 37 20 chr2 194119357 194121801 -56566053 - L1PBb LINE L1 -3223 2980 395 264 350 25 42 chr2 194121964 194122204 -56565650 - L1PBb LINE L1 -5847 357 122 8791 49 2 1 chr2 194122381 194123449 -56564405 - MER11C LTR ERVK -2 1069 1 510 154 0 0 chr2 194123953 194124031 -56563823 + MER47A DNA MER2_type 288 365 -1 1546 206 30 31 chr2 194124068 194124459 -56563395 + MLT1E3 LTR MaLR 200 624 0 489 247 70 38 chr2 194124750 194124936 -56562918 + MLT1J LTR MaLR 78 269 -242 305 32 16 48 chr2 194124977 194125039 -56562815 + (CAAAAA)n Simple_repeat Simple_repeat 1 60 0 241 111 28 0 chr2 194125042 194125078 -56562776 + MLT1J1 LTR MaLR 283 319 -127 2642 77 14 6 chr2 194125670 194126022 -56561832 + THE1A LTR MaLR 1 355 0 1881 149 62 174 chr2 194126421 194127134 -56560720 - LTR8 LTR ERV1 0 691 95 659 275 130 39 chr2 194127303 194127718 -56560136 + MLT1J LTR MaLR 9 461 -50 236 259 37 15 chr2 194127885 194128020 -56559834 + L1MDa LINE L1 2436 2573 -3967 239 192 39 67 chr2 194128025 194128129 -56559725 + L1MDa LINE L1 2649 2749 -3791 228 295 43 14 chr2 194128131 194128270 -56559584 + L1MDa LINE L1 2723 2865 -3675 244 225 28 0 chr2 194128328 194128399 -56559455 + L1M4 LINE L1 4220 4292 -1854 1063 221 27 34 chr2 194128404 194128698 -56559156 + L1M4 LINE L1 4419 4710 -1436 * 1668 260 56 22 chr2 194128688 194129311 -56558543 - L1M4 LINE L1 -1941 5016 4373 16776 165 32 10 chr2 194129325 194130660 -56557194 - L1PB1 LINE L1 -3 6864 5561 2199 102 3 20 chr2 194130660 194130965 -56556889 - AluSq SINE Alu -13 300 1 16776 165 32 10 chr2 194130965 194132626 -56555228 - L1PB1 LINE L1 -1306 5561 3939 2261 88 3 3 chr2 194132626 194132921 -56554933 - AluSx SINE Alu -17 295 1 16776 165 32 10 chr2 194132921 194133187 -56554667 - L1PB1 LINE L1 -2928 3939 3680 2131 126 0 0 chr2 194133187 194133508 -56554346 - AluSx SINE Alu 0 321 1 16776 165 32 10 chr2 194133508 194136938 -56550916 - L1PB1 LINE L1 -3187 3680 1 1631 245 46 49 chr2 194136946 194137370 -56550484 - L1M4 LINE L1 -2570 4387 3964 2070 158 3 0 chr2 194137370 194137681 -56550173 - AluSx SINE Alu 0 312 1 1631 245 46 49 chr2 194137681 194138055 -56549799 - L1M4 LINE L1 -2993 3964 3591 431 272 61 11 chr2 194138084 194138264 -56549590 - L1M4 LINE L1 -4578 2560 2372 243 286 0 98 chr2 194139114 194139226 -56548628 + MLT1K LTR MaLR 207 307 -281 1610 220 113 42 chr2 194139228 194140162 -56547692 - L1M4 LINE L1 -4731 2228 1209 233 358 18 9 chr2 194140227 194140336 -56547518 - L1M4 LINE L1 -5668 1187 1078 351 329 13 7 chr2 194140699 194140848 -56547006 - L1M4 LINE L1 -6618 241 92 776 58 0 0 chr2 194141058 194141161 -56546693 + L1PA4 LINE L1 6049 6151 -4 316 306 137 33 chr2 194141590 194141897 -56545957 - L1M4 LINE L1 -1650 4496 4158 23 0 0 0 chr2 194142159 194142182 -56545672 + AT_rich Low_complexity Low_complexity 1 23 0 2045 123 3 13 chr2 194142191 194142491 -56545363 + AluSx SINE Alu 1 297 -15 703 301 32 91 chr2 194142538 194142740 -56545114 + L2 LINE L2 2476 2643 -671 1323 32 0 0 chr2 194142740 194142896 -56544958 + L1PA3 LINE L1 6000 6155 0 703 301 32 91 chr2 194142896 194143102 -56544752 + L2 LINE L2 2643 2860 -454 3648 109 176 3 chr2 194143523 194144110 -56543744 - LTR12 LTR ERV1 0 688 1 2127 72 38 20 chr2 194144975 194145268 -56542586 + AluY SINE Alu 1 298 -13 2246 93 0 7 chr2 194145349 194145650 -56542204 + AluY SINE Alu 1 299 -12 2248 254 107 17 chr2 194145776 194146291 -56541563 + Charlie2a DNA MER1_type 1 468 -2394 2175 111 0 3 chr2 194146291 194146588 -56541266 + AluSx SINE Alu 1 296 -16 2248 254 107 17 chr2 194146588 194147036 -56540818 + Charlie2a DNA MER1_type 468 1096 -1766 578 167 38 65 chr2 194147064 194147250 -56540604 + Charlie2a DNA MER1_type 2271 2451 -411 3132 263 193 48 chr2 194147253 194147343 -56540511 - L2 LINE L2 -6 3307 3231 372 22 0 0 chr2 194147343 194147388 -56540466 + (CA)n Simple_repeat Simple_repeat 1 45 0 3132 263 193 48 chr2 194147388 194149106 -56538748 - L2 LINE L2 -82 3231 1218 300 221 0 23 chr2 194149106 194149192 -56538662 + Charlie2 DNA MER1_type 2370 2453 -409 559 164 35 0 chr2 194149363 194149479 -56538375 - L1MA7 LINE L1 -11 6484 6365 10091 232 28 54 chr2 194149485 194149663 -56538191 - L1MA7 LINE L1 -832 5518 5337 1925 139 3 16 chr2 194149663 194149972 -56537882 - AluSq SINE Alu -7 306 2 10091 232 28 54 chr2 194149972 194150751 -56537103 - L1MA7 LINE L1 -1013 5337 4540 1045 175 34 0 chr2 194150751 194150928 -56536926 - AluJb SINE Alu -20 292 110 10091 232 28 54 chr2 194150928 194152106 -56535748 - L1MA7 LINE L1 -1810 4540 3333 2251 91 0 11 chr2 194152106 194152428 -56535426 - AluY SINE Alu 0 321 3 10091 232 28 54 chr2 194152428 194152801 -56535053 - L1MA7 LINE L1 -3017 3333 2952 1794 189 21 21 chr2 194152801 194153176 -56534678 - THE1C LTR MaLR 0 375 1 8807 141 20 45 chr2 194153176 194154797 -56533057 - THE1C-int LTR MaLR 0 1580 1 1946 139 52 30 chr2 194154797 194155164 -56532690 - THE1C LTR MaLR 0 375 1 10091 232 28 54 chr2 194155164 194158629 -56529225 - L1MA7 LINE L1 -3395 2955 1 868 227 69 4 chr2 194158795 194159072 -56528782 + Charlie2 DNA MER1_type 2488 2782 -80 283 327 10 0 chr2 194159077 194159178 -56528676 - L1M4 LINE L1 -1185 4961 4860 2385 134 46 106 chr2 194159226 194159771 -56528083 - L1MB3 LINE L1 -43 6140 5629 527 345 42 22 chr2 194160087 194160429 -56527425 + LTR16B LTR ERVL 1 348 -102 2316 179 31 7 chr2 194160429 194160847 -56527007 - MSTC LTR MaLR 0 428 1 299 335 152 0 chr2 194161205 194161369 -56526485 + MIR SINE MIR 57 245 -17 22 0 0 0 chr2 194161657 194161679 -56526175 + AT_rich Low_complexity Low_complexity 1 22 0 285 29 0 0 chr2 194162409 194162443 -56525411 + (TA)n Simple_repeat Simple_repeat 1 34 0 495 194 0 0 chr2 194162916 194163019 -56524835 + (TA)n Simple_repeat Simple_repeat 1 103 0 239 363 60 42 chr2 194163529 194163980 -56523874 + L2 LINE L2 2336 2868 -446 435 266 13 51 chr2 194164026 194164184 -56523670 - L1ME1 LINE L1 -19 6147 5996 398 370 21 11 chr2 194164206 194164395 -56523459 + LTR16B LTR ERVL 107 297 -167 555 230 36 0 chr2 194164395 194164534 -56523320 - L1MC4 LINE L1 -2055 5987 5844 356 284 0 0 chr2 194164872 194164953 -56522901 + MER58 DNA MER1_type 134 2419 -1 226 219 24 37 chr2 194164997 194165079 -56522775 - LTR50 LTR ERVL -2 793 713 360 304 75 38 chr2 194165196 194165388 -56522466 - LTR33A LTR ERVL -361 162 17 235 225 70 28 chr2 194165388 194165459 -56522395 + L2 LINE L2 3199 3272 0 638 290 88 60 chr2 194167351 194167669 -56520185 + L1ME4a LINE L1 5366 5707 -414 2296 95 3 0 chr2 194167669 194167965 -56519889 - AluSp SINE Alu -16 297 1 638 290 88 60 chr2 194167965 194168181 -56519673 + L1ME4a LINE L1 5707 5915 -206 995 209 11 6 chr2 194168191 194168373 -56519481 - MER58A DNA MER1_type 0 224 42 442 326 60 28 chr2 194169360 194169578 -56518276 - L2 LINE L2 -660 2654 2430 186 374 49 25 chr2 194169659 194169822 -56518032 - L2 LINE L2 -274 2998 2832 24 0 0 0 chr2 194171766 194171790 -56516064 + AT_rich Low_complexity Low_complexity 1 24 0 638 26 0 0 chr2 194172574 194172651 -56515203 + L1PA5 LINE L1 6073 6149 -5 23 0 0 0 chr2 194172651 194172674 -56515180 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr2 194173092 194173118 -56514736 + (A)n Simple_repeat Simple_repeat 1 26 0 2087 116 0 28 chr2 194173120 194173438 -56514416 + AluSx SINE Alu 1 309 -3 497 274 0 14 chr2 194173456 194173602 -56514252 - L1MC5 LINE L1 -46 7915 7772 261 249 24 91 chr2 194173613 194173716 -56514138 - L1ME1 LINE L1 -5 6161 6072 2244 84 28 0 chr2 194173716 194174001 -56513853 + AluSg SINE Alu 1 293 -17 261 249 24 91 chr2 194174001 194174062 -56513792 - L1ME1 LINE L1 -94 6072 6008 273 157 20 0 chr2 194174071 194174122 -56513732 - MER66B LTR ERV1 -140 346 295 1957 216 60 2 chr2 194174123 194174573 -56513281 - L1ME1 LINE L1 -142 6024 5549 198 0 0 0 chr2 194177438 194177460 -56510394 + (TTTC)n Simple_repeat Simple_repeat 1 22 0 1189 80 6 6 chr2 194177461 194177637 -56510217 + (TTC)n Simple_repeat Simple_repeat 2 177 0 2170 104 0 20 chr2 194177640 194177938 -56509916 - AluSx SINE Alu -20 292 1 192 294 118 0 chr2 194178016 194178067 -56509787 + MIR SINE MIR 32 88 -174 3451 92 12 2 chr2 194178082 194178563 -56509291 - L1PA14 LINE L1 -1 6160 5675 12287 173 10 5 chr2 194178696 194181835 -56506019 - L1PA14 LINE L1 -1 7598 4439 215 255 0 0 chr2 194181835 194181882 -56505972 + MIR SINE MIR 214 260 -2 21070 135 14 8 chr2 194181925 194185421 -56502433 - L1PA14 LINE L1 -4069 3515 1 407 262 145 14 chr2 194185427 194185572 -56502282 + MIR SINE MIR 97 260 -2 942 203 91 117 chr2 194185671 194186134 -56501720 + Charlie4a DNA MER1_type 28 478 -30 341 341 36 52 chr2 194186158 194186466 -56501388 + L2 LINE L2 2675 2977 -337 1242 161 37 75 chr2 194187367 194187715 -56500139 + LTR56 LTR ERV1 1 335 -110 447 267 48 7 chr2 194187775 194187921 -56499933 + LTR23 LTR ERV1 286 437 0 469 285 80 75 chr2 194187975 194188364 -56499490 + L1MC/D LINE L1 4882 5272 -874 619 273 123 23 chr2 194188377 194188677 -56499177 + L1MC/D LINE L1 5297 5626 -2182 446 311 149 28 chr2 194188730 194188978 -56498876 + MLT1L LTR MaLR 330 607 -8 986 257 150 13 chr2 194189206 194189580 -56498274 - MER57B LTR ERV1 0 434 10 281 170 0 0 chr2 194190339 194190386 -56497468 + MIR SINE MIR 107 153 -109 306 24 24 0 chr2 194190983 194191025 -56496829 + (TTTA)n Simple_repeat Simple_repeat 2 104 0 2088 73 0 11 chr2 194191025 194191300 -56496554 - AluY SINE Alu -36 275 12 455 185 115 57 chr2 194193789 194193946 -56493908 + LTR45 LTR ERV1 324 525 0 2597 114 3 8 chr2 194193958 194194335 -56493519 + THE1C LTR MaLR 1 375 0 4597 128 73 58 chr2 194194335 194195278 -56492576 + THE1C-int LTR MaLR 1 957 -623 327 194 11 72 chr2 194195315 194195495 -56492359 + C-rich Low_complexity Low_complexity 5 173 0 295 116 0 29 chr2 194195502 194195571 -56492283 + (CCCCCA)n Simple_repeat Simple_repeat 3 69 0 305 328 0 0 chr2 194195687 194195806 -56492048 + G-rich Low_complexity Low_complexity 1 119 0 677 186 0 0 chr2 194195873 194195997 -56491857 + Tigger3(Golem) DNA MER2_type 2850 2973 -56 30 77 0 0 chr2 194196107 194196172 -56491682 + AT_rich Low_complexity Low_complexity 1 65 0 1260 306 111 41 chr2 194196234 194196490 -56491364 + L1M4 LINE L1 2271 2508 -3638 2202 120 22 11 chr2 194196490 194196849 -56491005 + L1PA16 LINE L1 5804 6166 0 1260 306 111 41 chr2 194196849 194197705 -56490149 + L1M4 LINE L1 2508 3461 -2685 254 242 144 23 chr2 194197800 194197932 -56489922 - MER112 DNA MER1_type -95 165 18 200 128 0 26 chr2 194197959 194197998 -56489856 + (TAAAAA)n Simple_repeat Simple_repeat 3 40 0 240 200 0 0 chr2 194198042 194198092 -56489762 - L1M4 LINE L1 -1599 4547 4498 209 225 0 0 chr2 194198127 194198167 -56489687 + MER5B DNA MER1_type 1 40 -138 2192 89 38 3 chr2 194198190 194198481 -56489373 + AluSx SINE Alu 1 301 -11 2267 102 0 10 chr2 194198790 194199093 -56488761 + AluSc SINE Alu 1 300 -9 201 152 0 0 chr2 194199228 194199261 -56488593 + L2 LINE L2 3188 3220 -93 3065 120 10 20 chr2 194199980 194200480 -56487374 - MER41E LTR ERV1 0 512 18 350 366 103 34 chr2 194200624 194200886 -56486968 + L2 LINE L2 2940 3219 -53 4289 52 4 5 chr2 194200919 194201471 -56486383 + L1PA2 LINE L1 5605 6155 0 264 239 15 15 chr2 194203921 194203988 -56483866 + GA-rich Low_complexity Low_complexity 1 67 0 2839 117 63 2 chr2 194204519 194204965 -56482889 + L1PB3 LINE L1 5679 6151 -3 216 219 0 0 chr2 194204966 194205007 -56482847 + (TA)n Simple_repeat Simple_repeat 1 41 0 21 36 0 0 chr2 194205571 194205599 -56482255 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 194209119 194209154 -56478700 + AT_rich Low_complexity Low_complexity 1 35 0 565 270 190 19 chr2 194210413 194210624 -56477230 + MIR SINE MIR 4 250 -12 2907 163 19 84 chr2 194210861 194211238 -56476616 - MER82 DNA MER2_type 0 653 342 1234 129 33 0 chr2 194211238 194211448 -56476406 + L1MB3 LINE L1 5960 6176 -7 2907 163 19 84 chr2 194211448 194211768 -56476086 - MER82 DNA MER2_type -311 342 2 254 406 0 10 chr2 194212671 194212767 -56475087 + MIR3 SINE MIR 12 106 -102 436 314 25 0 chr2 194212807 194212928 -56474926 - L2 LINE L2 0 3313 3190 414 231 25 0 chr2 194212995 194213116 -56474738 - Charlie1 DNA MER1_type 0 2761 2638 927 244 9 9 chr2 194213129 194213346 -56474508 - Charlie1 DNA MER1_type -2540 221 5 1053 136 7 7 chr2 194213898 194214052 -56473802 + AluSx SINE Alu 1 154 -158 315 258 72 31 chr2 194214201 194214298 -56473556 + L2 LINE L2 3143 3243 -29 2142 116 0 16 chr2 194214310 194214613 -56473241 - AluSx SINE Alu -14 298 1 2731 126 0 11 chr2 194214965 194215409 -56472445 - L1PA16 LINE L1 -201 5965 5527 1614 125 193 12 chr2 194215410 194215446 -56472408 - Tigger2 DNA MER2_type -1009 1709 1681 2434 75 3 10 chr2 194215446 194215753 -56472101 - AluSx SINE Alu -7 305 1 1614 125 193 12 chr2 194215753 194216037 -56471817 - Tigger2 DNA MER2_type -1037 1681 1331 2267 255 154 18 chr2 194216139 194216585 -56471269 - L1MDb LINE L1 -4048 2539 2155 949 224 29 5 chr2 194216585 194216795 -56471059 - MER20 DNA MER1_type -4 215 1 2267 255 154 18 chr2 194216795 194217618 -56470236 - L1MDb LINE L1 -4432 2155 1040 1276 124 64 20 chr2 194217623 194217825 -56470029 - AluSq SINE Alu -16 297 87 21 36 0 0 chr2 194217871 194217899 -56469955 + AT_rich Low_complexity Low_complexity 1 28 0 653 134 10 0 chr2 194217903 194218000 -56469854 - AluSq SINE Alu -212 100 3 369 296 98 39 chr2 194218002 194218340 -56469514 - L1MDb LINE L1 -5491 1096 739 569 242 82 14 chr2 194218586 194218805 -56469049 - L1MDb LINE L1 -6127 460 227 468 244 225 32 chr2 194218888 194219203 -56468651 + L1MC/D LINE L1 5274 5649 -2159 582 272 40 45 chr2 194219475 194219677 -56468177 + L2 LINE L2 2260 2460 -854 279 276 98 8 chr2 194219793 194219916 -56467938 - MIR SINE MIR -1 261 128 2205 116 0 0 chr2 194219928 194220220 -56467634 + AluSx SINE Alu 1 292 -20 315 0 0 0 chr2 194220256 194220291 -56467563 + (TG)n Simple_repeat Simple_repeat 1 35 0 231 36 0 0 chr2 194220290 194220318 -56467536 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 518 250 45 86 chr2 194220697 194220917 -56466937 - L2 LINE L2 -86 3186 2976 231 247 39 26 chr2 194220901 194220978 -56466876 + MIR SINE MIR 175 252 -10 * 234 291 0 0 chr2 194221032 194221087 -56466767 - L2 LINE L2 -8 3305 3251 952 164 85 108 chr2 194221414 194222021 -56465833 + LTR49 LTR ERV1 1 720 -67 3616 130 139 25 chr2 194222216 194222862 -56464992 + MER72 LTR ERV1 3 722 0 562 294 96 10 chr2 194223032 194223229 -56464625 - MIR SINE MIR -38 224 11 999 86 19 12 chr2 194223335 194223497 -56464357 - L1MA8 LINE L1 -4 6287 6125 1893 121 36 0 chr2 194223497 194223778 -56464076 + AluJb SINE Alu 1 291 -21 1414 197 51 66 chr2 194223818 194224270 -56463584 - LTR56 LTR ERV1 0 445 1 278 305 38 48 chr2 194224282 194224387 -56463467 - MIR SINE MIR -155 107 4 412 232 101 42 chr2 194224387 194224491 -56463363 - MER5B DNA MER1_type 0 178 59 2230 119 0 0 chr2 194224491 194224793 -56463061 - AluSx SINE Alu -10 302 1 412 232 101 42 chr2 194224793 194224856 -56462998 - MER5B DNA MER1_type -119 59 1 262 341 11 0 chr2 194225121 194225209 -56462645 + MIR SINE MIR 28 116 -146 1387 282 60 39 chr2 194226936 194227556 -56460298 - ERVL LTR ERVL -414 5350 4718 777 339 20 3 chr2 194227688 194228036 -56459818 - ERVL LTR ERVL -1511 4253 3900 195 290 56 75 chr2 194228487 194228594 -56459260 - MIR SINE MIR -63 145 41 496 263 0 38 chr2 194229240 194229373 -56458481 + MIR3 SINE MIR 78 205 -3 186 43 0 0 chr2 194229649 194229672 -56458182 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 921 224 144 4 chr2 194230648 194230898 -56456956 + MLT1F LTR MaLR 58 342 -200 437 270 87 32 chr2 194231219 194231404 -56456450 + L2 LINE L2 3119 3313 0 206 333 0 0 chr2 194232085 194232142 -56455712 + L3 LINE CR1 1519 1575 -2 412 233 53 0 chr2 194232216 194232349 -56455505 - L1ME4a LINE L1 -9 6112 5973 2641 133 61 2 chr2 194232579 194233006 -56454848 + LTR47A LTR ERVL 1 452 0 262 344 28 22 chr2 194233047 194233227 -56454627 - L1ME LINE L1 -513 5608 5428 23 54 0 0 chr2 194233376 194233413 -56454441 + AT_rich Low_complexity Low_complexity 1 37 0 2353 78 0 33 chr2 194233541 194233848 -56454006 + AluSx SINE Alu 1 297 -15 500 275 88 29 chr2 194234722 194234893 -56452961 - MIR SINE MIR -62 200 20 2315 87 3 0 chr2 194235343 194235631 -56452223 + AluSg SINE Alu 1 289 -21 1682 193 22 16 chr2 194235718 194236081 -56451773 + MLT1A1 LTR MaLR 1 365 0 1442 204 72 23 chr2 194236173 194236721 -56451133 - MLT2F LTR ERVL -42 621 1 1024 194 78 123 chr2 194237053 194237435 -56450419 - MLT1A1 LTR MaLR 0 365 1 2101 89 24 0 chr2 194237465 194237756 -56450098 - L1PA11 LINE L1 -3 6171 5874 2249 116 3 52 chr2 194237756 194238143 -56449711 - Tigger1 DNA MER2_type -256 2162 1795 911 123 7 14 chr2 194238147 194238315 -56449539 + FLAM_C SINE Alu 7 173 0 10501 120 31 32 chr2 194238320 194240130 -56447724 - Tigger1 DNA MER2_type -609 1809 1 520 344 78 76 chr2 194240239 194241033 -56446821 + L1MEd LINE L1 44 839 -5280 5410 147 29 1 chr2 194241089 194241972 -56445882 + L1P4 LINE L1 1 908 -5941 11591 196 18 16 chr2 194241975 194244910 -56442944 + L1P4 LINE L1 3079 6024 -845 1652 194 7 3 chr2 194244910 194245209 -56442645 + AluJb SINE Alu 1 300 -12 11591 196 18 16 chr2 194245209 194245679 -56442175 + L1P4 LINE L1 6024 6492 -377 393 348 43 14 chr2 194246233 194246374 -56441480 + L2 LINE L2 3128 3272 0 459 266 101 43 chr2 194247593 194247781 -56440073 + MIR SINE MIR 40 238 -24 373 253 0 0 chr2 194248297 194248376 -56439478 - MIR3 SINE MIR -54 154 76 2193 123 3 0 chr2 194248557 194248857 -56438997 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 194249185 194249206 -56438648 + AT_rich Low_complexity Low_complexity 1 21 0 1000 235 6 0 chr2 194250317 194250500 -56437354 - MER5A DNA MER1_type 0 189 6 21 36 0 0 chr2 194250965 194250993 -56436861 + AT_rich Low_complexity Low_complexity 1 28 0 204 97 0 0 chr2 194252052 194252083 -56435771 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 1742 92 0 0 chr2 194252287 194252514 -56435340 - AluY SINE Alu 0 311 85 436 260 102 41 chr2 194252818 194253283 -56434571 - L1 LINE L1 -2008 4138 3615 21 0 0 0 chr2 194253335 194253356 -56434498 + AT_rich Low_complexity Low_complexity 1 21 0 668 284 49 31 chr2 194254004 194254331 -56433523 + LTR16C LTR ERVL 159 491 0 403 201 59 118 chr2 194254790 194254846 -56433008 - HAL1 LINE L1 -863 1644 1586 2313 63 0 3 chr2 194254846 194255157 -56432697 - AluY SINE Alu 0 310 1 403 201 59 118 chr2 194255157 194255353 -56432501 - HAL1 LINE L1 -921 1586 1406 344 218 8 0 chr2 194255516 194255649 -56432205 + GA-rich Low_complexity Low_complexity 1 134 0 378 0 0 0 chr2 194255662 194255704 -56432150 + (TA)n Simple_repeat Simple_repeat 2 43 0 2842 13 0 0 chr2 194255709 194256020 -56431834 - AluYa5 SINE Alu 0 311 1 1546 210 94 6 chr2 194256575 194256937 -56430917 - MSTD LTR MaLR -2 394 1 611 273 0 14 chr2 194257339 194257507 -56430347 + MIR SINE MIR 2 167 -41 9425 35 4 0 chr2 194258333 194259532 -56428322 + L1P LINE L1 3199 4402 -1744 3705 120 42 7 chr2 194259532 194260132 -56427722 - LTR9B LTR ERV1 -23 621 1 1565 194 6 6 chr2 194260132 194260437 -56427417 + Tigger6a DNA MER2_type 298 602 -481 1923 133 18 15 chr2 194260437 194260768 -56427086 + MER1B DNA MER1_type 1 332 -7 2186 200 27 2 chr2 194260774 194261253 -56426601 + Tigger6a DNA MER2_type 593 1083 0 1977 152 10 0 chr2 194261515 194261812 -56426042 - AluJo SINE Alu -10 302 3 216 86 0 0 chr2 194262278 194262313 -56425541 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1795 158 17 24 chr2 194263212 194263503 -56424351 - AluJo SINE Alu -13 299 11 2341 194 20 24 chr2 194264100 194264610 -56423244 + MLT2B3 LTR ERVL 1 508 -46 1489 167 44 0 chr2 194264620 194264890 -56422964 - Tigger3b DNA MER2_type 0 1232 951 1279 175 19 0 chr2 194264900 194265106 -56422748 + AluJo SINE Alu 72 281 -31 2692 134 15 11 chr2 194265107 194265744 -56422110 - Tigger3b DNA MER2_type -489 742 1 2397 94 3 3 chr2 194266412 194266721 -56421133 + AluSc SINE Alu 1 309 0 309 235 0 0 chr2 194268209 194268277 -56419577 - MER113 DNA MER1_type? 0 521 454 21 57 0 0 chr2 194268367 194268402 -56419452 + AT_rich Low_complexity Low_complexity 1 35 0 229 271 52 0 chr2 194269553 194269649 -56418205 - L1ME LINE L1 -302 5819 5719 295 299 103 9 chr2 194270429 194270536 -56417318 - MIR3 SINE MIR -14 194 78 409 200 0 33 chr2 194271403 194271493 -56416361 + MER21B LTR ERV1 1 87 -776 2651 225 109 28 chr2 194271518 194272300 -56415554 + MER21B LTR ERV1 19 863 0 5645 147 79 22 chr2 194272311 194273376 -56414478 + L1MA7 LINE L1 4223 5226 -1065 2357 48 7 7 chr2 194273376 194273665 -56414189 + AluY SINE Alu 21 309 -2 5645 147 79 22 chr2 194273665 194274523 -56413331 + L1MA7 LINE L1 5226 6288 -3 384 260 205 0 chr2 194275719 194275846 -56412008 + MER5A DNA MER1_type 37 189 0 958 239 45 9 chr2 194275969 194276191 -56411663 + MIR SINE MIR 12 241 -21 3088 111 4 26 chr2 194276656 194277124 -56410730 - LTR22A LTR ERVK 0 458 1 202 271 219 13 chr2 194277276 194277427 -56410427 - L2 LINE L2 -842 2472 2291 256 355 103 34 chr2 194278961 194279223 -56408631 + L2 LINE L2 224 503 -2811 329 215 94 0 chr2 194279294 194279384 -56408470 + MIR SINE MIR 92 189 -61 284 301 245 44 chr2 194279386 194279798 -56408056 - L2 LINE L2 0 3313 2819 2296 117 56 8 chr2 194279827 194280185 -56407669 - THE1C LTR MaLR 0 375 1 10346 102 39 35 chr2 194280185 194281759 -56406095 - THE1C-int LTR MaLR 0 1580 1 2558 114 5 8 chr2 194281759 194282135 -56405719 - THE1C LTR MaLR 0 375 1 409 196 108 57 chr2 194282147 194282305 -56405549 - LTR45 LTR ERV1 0 525 324 238 226 57 66 chr2 194282383 194282489 -56405365 - MER72 LTR ERV1 -246 476 372 3026 124 10 20 chr2 194283096 194283596 -56404258 - MER41E LTR ERV1 0 512 18 363 355 107 38 chr2 194283739 194284001 -56403853 + L2 LINE L2 2940 3219 -53 4756 15 0 0 chr2 194284034 194284595 -56403259 + L1PA2 LINE L1 5605 6165 0 23 33 0 0 chr2 194284595 194284625 -56403229 + AT_rich Low_complexity Low_complexity 1 30 0 25 83 0 0 chr2 194284827 194284887 -56402967 + AT_rich Low_complexity Low_complexity 1 60 0 654 209 80 70 chr2 194284970 194285095 -56402759 - L1MC4a LINE L1 -1811 5997 5875 2162 110 7 3 chr2 194285095 194285387 -56402467 + AluSq SINE Alu 1 293 -20 654 209 80 70 chr2 194285387 194285399 -56402455 - L1MC4a LINE L1 -1933 5875 5865 1401 190 74 22 chr2 194285399 194285668 -56402186 + AluJo SINE Alu 1 283 -19 654 209 80 70 chr2 194285668 194285816 -56402038 - L1MC4a LINE L1 -1943 5865 5708 1655 176 91 0 chr2 194285875 194286193 -56401661 + MER7A DNA MER2_type 1 345 -1 228 186 0 0 chr2 194286219 194286278 -56401576 + (TA)n Simple_repeat Simple_repeat 2 60 0 237 290 110 0 chr2 194286278 194286378 -56401476 - L1MC4a LINE L1 -2150 5658 5548 12188 175 13 13 chr2 194286406 194289351 -56398503 - L1PB1 LINE L1 -1 6866 3923 2478 88 3 0 chr2 194289351 194289659 -56398195 - AluSp SINE Alu 0 313 5 12188 175 13 13 chr2 194289659 194290356 -56397498 - L1PB1 LINE L1 -2944 3923 3227 916 187 77 29 chr2 194290354 194290600 -56397254 - L1PB1 LINE L1 -6007 856 599 * 1005 283 72 10 chr2 194290612 194291111 -56396743 - L1PB1 LINE L1 -6312 551 22 720 258 67 4 chr2 194291193 194291460 -56396394 - L1MC4a LINE L1 -2258 5550 5267 3237 101 26 0 chr2 194291609 194292073 -56395781 - L1PA10 LINE L1 0 6168 5693 1987 127 42 23 chr2 194292120 194292427 -56395427 + AluSq SINE Alu 1 313 0 740 201 0 0 chr2 194292442 194292576 -56395278 + AluJo SINE Alu 1 134 -178 942 298 90 51 chr2 194292622 194293293 -56394561 - L1MC4a LINE L1 -1089 5057 4413 2473 80 0 0 chr2 194293293 194293595 -56394259 - AluY SINE Alu -9 302 1 942 298 90 51 chr2 194293595 194294210 -56393644 - L1MC4a LINE L1 -1733 4413 3736 345 227 68 12 chr2 194295117 194295228 -56392626 - MLT1H LTR MaLR -376 173 14 298 362 133 0 chr2 194295911 194296121 -56391733 - L2 LINE L2 -1715 1599 1362 321 257 73 97 chr2 194296219 194296425 -56391429 + L1M4 LINE L1 4458 4658 -1488 244 318 40 12 chr2 194296505 194296678 -56391176 + L1M4 LINE L1 4771 4948 -1198 649 294 96 12 chr2 194296951 194297493 -56390361 + L1PA7 LINE L1 5264 5846 -308 458 171 86 19 chr2 194297510 194297615 -56390239 - MIR SINE MIR -70 192 81 243 0 0 0 chr2 194297768 194297795 -56390059 + (CA)n Simple_repeat Simple_repeat 2 28 0 3911 40 43 0 chr2 194298252 194298722 -56389132 + LTR2B LTR ERV1 1 490 0 338 323 64 24 chr2 194299275 194299526 -56388328 - L2 LINE L2 -2905 409 149 2647 48 0 0 chr2 194303553 194303864 -56383990 + AluY SINE Alu 1 311 0 268 314 0 0 chr2 194303956 194304026 -56383828 - L2 LINE L2 -1 3271 3202 21 0 0 0 chr2 194304074 194304095 -56383759 + AT_rich Low_complexity Low_complexity 1 21 0 1736 167 21 3 chr2 194304653 194304941 -56382913 + AluJb SINE Alu 1 293 -19 27 0 0 0 chr2 194304965 194304992 -56382862 + AT_rich Low_complexity Low_complexity 1 27 0 474 270 52 19 chr2 194305258 194305469 -56382385 - L1ME LINE L1 -426 5736 5519 22 0 0 0 chr2 194305524 194305546 -56382308 + AT_rich Low_complexity Low_complexity 1 22 0 2053 138 0 0 chr2 194305555 194305867 -56381987 + AluSx SINE Alu 1 312 0 842 273 70 8 chr2 194305870 194306302 -56381552 + L1MEd LINE L1 898 1257 -4862 314 351 40 0 chr2 194306564 194306712 -56381142 + L1MEd LINE L1 3317 3470 -2659 216 0 0 0 chr2 194306718 194306742 -56381112 + (T)n Simple_repeat Simple_repeat 1 24 0 744 268 129 35 chr2 194306781 194307442 -56380412 + L1MEd LINE L1 3563 4285 -1844 1976 139 95 21 chr2 194307468 194307806 -56380048 - THE1B LTR MaLR -1 363 1 11749 87 2 19 chr2 194307806 194309412 -56378442 - THE1B-int LTR MaLR 0 1580 1 1882 151 98 21 chr2 194309412 194309750 -56378104 - THE1B LTR MaLR 0 364 1 389 56 0 0 chr2 194310364 194310418 -56377436 - MADE1 DNA Mariner -26 54 1 815 157 28 44 chr2 194310420 194310718 -56377136 - MLT1A1 LTR MaLR -24 350 5 187 211 53 0 chr2 194311938 194311976 -56375878 + L2 LINE L2 1367 1406 -1908 469 298 149 43 chr2 194313067 194313231 -56374623 + MIR SINE MIR 2 200 -62 2027 133 0 7 chr2 194313231 194313539 -56374315 + AluSx SINE Alu 1 306 -6 469 298 149 43 chr2 194313539 194313609 -56374245 + MIR SINE MIR 200 261 -1 231 359 141 0 chr2 194313983 194314125 -56373729 - L3 LINE CR1 -67 1510 1349 251 91 45 0 chr2 194314132 194314176 -56373678 + LTR10B LTR ERV1 6 51 -496 2461 135 103 22 chr2 194314198 194314702 -56373152 + LTR10A LTR ERV1 1 545 -64 305 312 121 0 chr2 194314721 194314862 -56372992 - L3 LINE CR1 -231 1346 1189 256 374 41 8 chr2 194315335 194315458 -56372396 - L2 LINE L2 -8 3264 3138 180 284 128 64 chr2 194315845 194316063 -56371791 + L3 LINE CR1 1022 1253 -324 22 0 0 0 chr2 194316180 194316202 -56371652 + AT_rich Low_complexity Low_complexity 1 22 0 864 212 166 46 chr2 194316209 194316535 -56371319 + MLT1A1 LTR MaLR 1 365 0 2270 94 0 7 chr2 194316751 194317048 -56370806 - AluSg SINE Alu -15 295 1 213 351 13 26 chr2 194318242 194318319 -56369535 + MIR SINE MIR 17 92 -170 2329 100 3 0 chr2 194319526 194319827 -56368027 + AluSq SINE Alu 1 302 -11 289 156 109 0 chr2 194320170 194320234 -56367620 + MIR3 SINE MIR 112 182 -26 24 85 0 0 chr2 194321186 194321245 -56366609 + GC_rich Low_complexity Low_complexity 1 59 0 405 281 113 6 chr2 194322473 194322633 -56365221 - L3 LINE CR1 -47 1530 1354 520 191 20 52 chr2 194322834 194323000 -56364854 + MIR SINE MIR 105 261 -1 188 373 30 0 chr2 194323045 194323112 -56364742 - L3 LINE CR1 -487 1090 1022 363 302 112 18 chr2 194323325 194323494 -56364360 - L3 LINE CR1 -801 776 592 302 318 214 6 chr2 194323529 194323702 -56364152 + MIR SINE MIR 48 256 -6 579 322 118 75 chr2 194323733 194324199 -56363655 - L3 LINE CR1 -1057 520 35 261 200 27 27 chr2 194325646 194325721 -56362133 - MER34 LTR ERV1 0 542 468 2201 115 0 3 chr2 194326356 194326652 -56361202 - AluSx SINE Alu -17 295 1 1824 124 0 0 chr2 194327243 194327493 -56360361 - AluSx SINE Alu -15 297 48 1511 197 28 3 chr2 194327981 194328265 -56359589 + AluJb SINE Alu 4 294 -18 184 200 0 0 chr2 194328623 194328658 -56359196 + L2 LINE L2 3272 3306 -7 1963 232 81 30 chr2 194330487 194331164 -56356690 - L1ME2 LINE L1 -27 6137 5426 2666 219 170 48 chr2 194331187 194331537 -56356317 - L1ME1 LINE L1 -23 6143 5837 2037 129 0 26 chr2 194331537 194331846 -56356008 - AluSx SINE Alu -11 301 1 2666 219 170 48 chr2 194331846 194332854 -56355000 - L1ME1 LINE L1 -329 5837 4954 351 0 0 0 chr2 194332854 194332893 -56354961 + (TG)n Simple_repeat Simple_repeat 2 40 0 2666 219 170 48 chr2 194332893 194334742 -56353112 - L1ME1 LINE L1 -1212 4954 2518 431 131 71 0 chr2 194334788 194334872 -56352982 - L1MC2 LINE L1 0 6344 6255 384 22 0 0 chr2 194334879 194334924 -56352930 + (CA)n Simple_repeat Simple_repeat 2 46 0 3162 188 61 22 chr2 194334937 194335266 -56352588 - L1MC1 LINE L1 -168 6234 5919 1531 150 48 65 chr2 194335266 194335559 -56352295 - AluJo SINE Alu -24 288 1 3162 188 61 22 chr2 194335559 194336410 -56351444 - L1MC1 LINE L1 -483 5919 4964 392 251 131 24 chr2 194336411 194336645 -56351209 - L1MC1 LINE L1 -3937 2278 2060 578 268 105 14 chr2 194336647 194337076 -56350778 - L1MC1 LINE L1 -5059 1146 679 566 188 21 76 chr2 194337106 194337250 -56350604 + MER58A DNA MER1_type 28 163 0 1410 158 89 72 chr2 194337250 194337598 -56350256 - MLT1A1 LTR MaLR 0 365 12 279 253 23 0 chr2 194338070 194338157 -56349697 - L1MC1 LINE L1 -6209 187 99 224 289 82 0 chr2 194338272 194338369 -56349485 - L3 LINE CR1 -297 1280 1176 1753 165 34 3 chr2 194338760 194339057 -56348797 + AluJb SINE Alu 1 306 -6 808 219 167 0 chr2 194339600 194339792 -56348062 - MER58A DNA MER1_type 0 224 1 223 314 29 9 chr2 194342776 194342881 -56344973 + (TGAA)n Simple_repeat Simple_repeat 3 109 0 274 224 71 35 chr2 194344177 194344262 -56343592 + MIR3 SINE MIR 108 195 -13 29 84 0 0 chr2 194344330 194344401 -56343453 + AT_rich Low_complexity Low_complexity 1 71 0 1307 200 125 7 chr2 194345183 194345488 -56342366 - MER58B DNA MER1_type 0 341 1 466 189 57 0 chr2 194346296 194346402 -56341452 + L1MD2 LINE L1 6227 6338 -21 2373 76 13 3 chr2 194347245 194347548 -56340306 + AluY SINE Alu 1 306 -5 1966 145 0 0 chr2 194348000 194348314 -56339540 + AluSx SINE Alu 1 314 0 432 275 42 14 chr2 194348600 194348742 -56339112 - L2 LINE L2 -2123 1191 1046 670 120 283 52 chr2 194349016 194349207 -56338647 - MER46A DNA MER2_type -1 235 1 1101 290 212 33 chr2 194349381 194351442 -56336412 + L2 LINE L2 763 3217 -96 401 313 100 22 chr2 194351666 194351896 -56335958 + L2 LINE L2 2460 2707 -607 528 280 63 63 chr2 194351962 194352280 -56335574 + L2 LINE L2 2995 3312 -1 929 271 40 12 chr2 194352346 194352597 -56335257 + MIR SINE MIR 5 262 0 294 279 0 0 chr2 194353002 194353070 -56334784 - MIR SINE MIR -59 149 82 271 221 70 0 chr2 194353246 194353332 -56334522 + L1ME4a LINE L1 6026 6117 -4 462 352 14 7 chr2 194354823 194355107 -56332747 + BaEV-int LTR ERV1 718 1003 -6782 850 275 47 81 chr2 194355303 194356089 -56331765 + BaEV-int LTR ERV1 1290 2048 -5737 524 169 113 0 chr2 194356151 194356275 -56331579 + LTR18B LTR ERVL 336 473 -141 412 214 103 28 chr2 194356258 194356403 -56331451 + LTR18B LTR ERVL 225 380 -234 * 212 353 0 30 chr2 194356407 194356540 -56331314 + GA-rich Low_complexity Low_complexity 1 129 0 393 155 188 46 chr2 194356880 194357099 -56330755 - Charlie8 DNA MER1_type -992 1425 60 2045 121 4 0 chr2 194357623 194357896 -56329958 + AluSx SINE Alu 21 294 -18 596 361 0 0 chr2 194357944 194358232 -56329622 + BaEV-int LTR ERV1 4322 4609 -2040 269 266 11 11 chr2 194358495 194358589 -56329265 + BaEV-int LTR ERV1 4762 4855 -1794 259 237 0 0 chr2 194359465 194359524 -56328330 + BaEV-int LTR ERV1 5827 5885 -764 323 298 192 13 chr2 194361614 194361765 -56326089 + MIR SINE MIR 2 179 -83 1604 192 130 85 chr2 194361934 194362683 -56325171 + LTR1B LTR ERV1 1 981 -39 6225 65 2 0 chr2 194362879 194363682 -56324172 + L1PA7 LINE L1 5348 6152 -2 709 144 18 0 chr2 194363684 194363795 -56324059 - FLAM_A SINE Alu -17 116 4 246 288 45 0 chr2 194363809 194363875 -56323979 + L2 LINE L2 3188 3256 -16 3327 137 27 0 chr2 194364196 194364744 -56323110 + L1PA5 LINE L1 13 575 -5571 * 23188 50 16 4 chr2 194364737 194366715 -56321139 + L1PA5 LINE L1 2189 4142 -2012 2571 68 3 0 chr2 194366715 194367025 -56320829 + AluSp SINE Alu 1 311 -2 23188 50 16 4 chr2 194367025 194368960 -56318894 + L1PA5 LINE L1 4142 6151 -3 290 65 87 0 chr2 194369536 194369582 -56318272 + MLT2B1 LTR ERVL 471 520 0 2203 90 0 0 chr2 194370828 194371107 -56316747 + AluSg SINE Alu 13 291 -19 735 244 135 13 chr2 194371124 194371435 -56316419 + L1ME3A LINE L1 3498 3846 -2300 868 246 45 31 chr2 194371439 194371792 -56316062 + L1M4 LINE L1 4821 5178 -968 846 211 40 70 chr2 194371810 194372137 -56315717 + L1ME3A LINE L1 3873 4189 -1957 223 200 40 0 chr2 194372140 194372190 -56315664 + GA-rich Low_complexity Low_complexity 2 53 0 2045 124 7 3 chr2 194372321 194372603 -56315251 + AluSx SINE Alu 7 289 -23 237 207 78 9 chr2 194372615 194372731 -56315123 + L1ME3A LINE L1 4321 4444 -1702 570 198 120 1 chr2 194372756 194373013 -56314841 + MER68 LTR ERV1 183 492 -70 323 153 17 0 chr2 194373013 194373072 -56314782 + MADE1 DNA Mariner 2 61 -19 2453 77 3 0 chr2 194373078 194373388 -56314466 + AluY SINE Alu 1 311 0 438 194 0 0 chr2 194373401 194373473 -56314381 + MER68 LTR ERV1 491 562 0 236 218 55 0 chr2 194373473 194373528 -56314326 - HAL1 LINE L1 -955 1552 1495 1634 241 104 50 chr2 194373569 194373701 -56314153 + L1ME3A LINE L1 5082 5205 -965 1896 155 90 3 chr2 194373701 194374036 -56313818 + THE1B LTR MaLR 1 364 0 1634 241 104 50 chr2 194374036 194374276 -56313578 + L1ME3A LINE L1 5205 5431 -739 2084 122 3 0 chr2 194374276 194374563 -56313291 + AluSq SINE Alu 1 288 -25 1634 241 104 50 chr2 194374563 194374984 -56312870 + L1ME3A LINE L1 5431 5943 -227 1905 98 61 4 chr2 194374984 194375248 -56312606 + AluSx SINE Alu 17 295 -17 1634 241 104 50 chr2 194375248 194375350 -56312504 + L1ME3A LINE L1 5943 6038 -132 386 93 0 0 chr2 194375365 194375419 -56312435 - LTR3b LTR ERVK 0 500 447 1988 161 39 55 chr2 194375419 194375855 -56311999 - LTR3 LTR ERVK 0 429 1 262 319 176 40 chr2 194376058 194376331 -56311523 + L2 LINE L2 2887 3196 -76 1596 244 97 13 chr2 194377486 194378034 -56309820 - L1ME2 LINE L1 0 6164 5571 6260 91 18 14 chr2 194378086 194378869 -56308985 - L1PA8 LINE L1 -33 6139 5360 2028 136 0 3 chr2 194378869 194379163 -56308691 - AluSg SINE Alu -17 293 1 6260 91 18 14 chr2 194379163 194380048 -56307806 - L1PA8 LINE L1 -812 5360 4461 2236 123 0 0 chr2 194380048 194380350 -56307504 - AluSq SINE Alu -11 302 1 15161 130 32 5 chr2 194380353 194383026 -56304828 - L1PA8 LINE L1 -2448 3698 952 2824 77 42 0 chr2 194383030 194383431 -56304423 + HERVL-A1 LTR ERVL 5237 5654 0 2937 86 23 7 chr2 194383431 194383860 -56303994 + MLT2A1 LTR ERVL 1 436 -8 2062 141 0 7 chr2 194384086 194384392 -56303462 + AluJb SINE Alu 1 304 -8 204 179 0 0 chr2 194384531 194384570 -56303284 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr2 194385561 194385589 -56302265 + AT_rich Low_complexity Low_complexity 1 28 0 2099 126 0 0 chr2 194386124 194386418 -56301436 + AluSx SINE Alu 17 310 -2 268 270 159 8 chr2 194386899 194387025 -56300829 - L3 LINE CR1 -14 1563 1419 755 360 61 24 chr2 194387134 194387673 -56300181 - L3 LINE CR1 -384 1193 635 429 226 130 14 chr2 194387858 194388066 -56299788 - HAL1 LINE L1 -1152 1355 1124 1246 151 93 34 chr2 194388136 194388427 -56299427 + Tigger1 DNA MER2_type 2110 2417 -1 491 290 226 33 chr2 194388743 194388981 -56298873 - HAL1 LINE L1 -1852 655 464 2161 133 7 0 chr2 194388981 194389289 -56298565 + AluSx SINE Alu 1 310 -2 491 290 226 33 chr2 194389289 194389598 -56298256 - HAL1 LINE L1 -2043 464 2 227 216 40 14 chr2 194390411 194390485 -56297369 + MER3 DNA MER1_type 133 208 -1 241 356 13 74 chr2 194390524 194390673 -56297181 + L2 LINE L2 2857 2996 -317 237 291 35 0 chr2 194391544 194391630 -56296224 - MIR SINE MIR 0 262 174 200 250 17 17 chr2 194391936 194391996 -56295858 - MIR SINE MIR -101 161 102 22 0 0 0 chr2 194392076 194392098 -56295756 + AT_rich Low_complexity Low_complexity 1 22 0 452 257 52 15 chr2 194392353 194392489 -56295365 - MIR SINE MIR -108 154 14 2134 105 18 0 chr2 194393307 194393593 -56294261 + AluSx SINE Alu 1 291 -21 572 279 108 31 chr2 194394008 194394266 -56293588 + L2 LINE L2 2659 2936 -378 1207 287 136 35 chr2 194394266 194394522 -56293332 + L2 LINE L2 1959 2188 -1084 1802 176 47 24 chr2 194394522 194394903 -56292951 + MLT1B LTR MaLR 1 390 0 1207 287 136 35 chr2 194394903 194395214 -56292640 + L2 LINE L2 2188 2466 -806 1108 134 34 43 chr2 194395214 194395423 -56292431 + MER3 DNA MER1_type 3 209 0 1207 287 136 35 chr2 194395423 194395827 -56292027 + L2 LINE L2 2466 3041 -231 3242 262 103 38 chr2 194395864 194396229 -56291625 + L1MEc LINE L1 35 375 -6021 189 0 0 0 chr2 194396229 194396250 -56291604 + (GA)n Simple_repeat Simple_repeat 1 21 0 3242 262 103 38 chr2 194396250 194396277 -56291577 + L1MEc LINE L1 375 399 -5997 1969 154 53 14 chr2 194396277 194396635 -56291219 - THE1C LTR MaLR -3 372 1 3242 262 103 38 chr2 194396635 194397722 -56290132 + L1MEc LINE L1 399 1611 -4785 623 241 121 11 chr2 194397723 194398005 -56289849 + L1MEc LINE L1 3111 3423 -2792 1049 200 67 32 chr2 194398005 194398344 -56289510 - MSTD LTR MaLR 0 396 15 2159 135 143 8 chr2 194398401 194398778 -56289076 + MSTA LTR MaLR 1 428 0 512 163 0 11 chr2 194398785 194398877 -56288977 + MSTA-int LTR MaLR 8 98 -1553 375 169 12 48 chr2 194398869 194398952 -56288902 - L1 LINE L1 -936 5210 5131 * 269 200 55 0 chr2 194398956 194399011 -56288843 + MST-int LTR MaLR 1255 1312 -339 3423 189 16 4 chr2 194399037 194399720 -56288134 - L1 LINE L1 -1010 5136 4446 444 19 0 0 chr2 194399720 194399773 -56288081 + (TG)n Simple_repeat Simple_repeat 2 54 0 962 214 0 0 chr2 194399779 194399961 -56287893 - AluJb SINE Alu -32 280 99 1949 156 48 11 chr2 194399961 194400339 -56287515 - L1 LINE L1 -1696 4450 4059 2579 204 146 40 chr2 194400349 194401226 -56286628 + L1M4 LINE L1 4026 4995 -1151 207 236 14 14 chr2 194401962 194402034 -56285820 + (TA)n Simple_repeat Simple_repeat 1 72 0 390 301 42 7 chr2 194402034 194402177 -56285677 + L2 LINE L2 2770 2917 -397 270 81 0 0 chr2 194402564 194402601 -56285253 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 1439 261 91 106 chr2 194403672 194404675 -56283179 + L2 LINE L2 1913 2900 -414 2232 232 72 54 chr2 194404754 194405236 -56282618 - L1ME3A LINE L1 -49 6121 5649 2380 95 0 16 chr2 194405236 194405551 -56282303 + AluSx SINE Alu 1 310 -2 2232 232 72 54 chr2 194405551 194406104 -56281750 - L1ME3A LINE L1 -521 5649 5053 369 270 89 37 chr2 194406151 194406421 -56281433 - L1ME3A LINE L1 -2742 3404 3121 545 271 89 10 chr2 194406438 194406641 -56281213 - L1ME3A LINE L1 -3274 2872 2654 1948 161 0 0 chr2 194406830 194407134 -56280720 - AluSx SINE Alu -8 304 1 23 0 0 0 chr2 194407147 194407170 -56280684 + AT_rich Low_complexity Low_complexity 1 23 0 1994 136 3 0 chr2 194407170 194407457 -56280397 - AluSq SINE Alu -25 288 1 203 83 83 0 chr2 194407465 194407501 -56280353 + T-rich Low_complexity Low_complexity 1 39 0 1877 142 40 7 chr2 194407595 194407897 -56279957 - AluSx SINE Alu 0 312 1 312 348 80 37 chr2 194408323 194408510 -56279344 + L1MEd LINE L1 561 755 -5364 350 137 0 0 chr2 194409152 194409203 -56278651 - MER66A LTR ERV1 -141 337 287 6578 61 36 6 chr2 194409247 194410636 -56277218 + L1PA8 LINE L1 4756 6170 -2 23 33 0 0 chr2 194410669 194410699 -56277155 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr2 194411394 194411434 -56276420 + AT_rich Low_complexity Low_complexity 1 40 0 704 318 81 46 chr2 194411451 194411683 -56276171 + L2 LINE L2 2345 2567 -747 2132 117 3 7 chr2 194411683 194411990 -56275864 - AluSx SINE Alu -6 306 1 704 318 81 46 chr2 194411990 194412349 -56275505 + L2 LINE L2 2567 2957 -357 473 315 103 48 chr2 194412430 194412703 -56275151 + L2 LINE L2 2974 3261 -11 2397 100 0 0 chr2 194413511 194413822 -56274032 + AluSx SINE Alu 1 311 -1 1495 176 96 0 chr2 194414230 194414502 -56273352 - AluJo SINE Alu -14 298 1 21 0 0 0 chr2 194414553 194414574 -56273280 + AT_rich Low_complexity Low_complexity 1 21 0 2304 168 102 6 chr2 194414972 194415460 -56272394 - MER34C LTR ERV1 -18 567 33 7851 130 35 11 chr2 194415772 194416802 -56271052 + HSMAR2 DNA Mariner 1 1068 -234 2064 180 84 2 chr2 194416802 194417196 -56270658 + MSTB LTR MaLR 1 426 0 7851 130 35 11 chr2 194417196 194417436 -56270418 + HSMAR2 DNA Mariner 1068 1301 -1 657 246 128 50 chr2 194418010 194418368 -56269486 + MER93a LTR ERV1 49 402 0 644 228 43 49 chr2 194418490 194418612 -56269242 + MER5A DNA MER1_type 2 124 -65 2175 113 3 0 chr2 194418612 194418904 -56268950 - AluSx SINE Alu -19 293 1 644 228 43 49 chr2 194418904 194418965 -56268889 + MER5A DNA MER1_type 124 184 -5 292 203 125 0 chr2 194419027 194419091 -56268763 - MER5B DNA MER1_type 0 178 107 451 88 0 0 chr2 194419091 194419159 -56268695 + Alu SINE Alu 235 302 -10 352 268 0 79 chr2 194419159 194419286 -56268568 - MER5B DNA MER1_type -61 117 1 1793 139 131 31 chr2 194419349 194419738 -56268116 - MSTC LTR MaLR 0 428 1 1283 205 119 42 chr2 194419738 194419934 -56267920 - MSTC-int LTR MaLR 0 1651 1471 4792 44 5 3 chr2 194419934 194420524 -56267330 + LTR10C LTR ERV1 1 591 0 1283 205 119 42 chr2 194420524 194420731 -56267123 - MSTC-int LTR MaLR -180 1471 1217 4342 140 22 6 chr2 194420736 194421431 -56266423 + MER50 LTR ERV1 5 710 -24 3823 233 73 43 chr2 194421438 194422623 -56265231 - MSTC-int LTR MaLR -514 1221 2 1253 212 131 48 chr2 194422625 194423045 -56264809 - MSTB2 LTR MaLR 0 457 3 832 168 0 0 chr2 194423410 194423541 -56264313 - MER46A DNA MER2_type -95 141 11 1726 170 172 19 chr2 194423542 194423974 -56263880 + LTR10A LTR ERV1 1 548 -61 325 182 0 0 chr2 194423999 194424054 -56263800 + MER46A DNA MER2_type 180 234 -2 895 117 43 37 chr2 194424180 194424343 -56263511 - MER105 DNA DNA -1 203 40 335 156 89 67 chr2 194424343 194424433 -56263421 - MER5A DNA MER1_type -6 183 92 280 235 0 0 chr2 194424449 194424500 -56263354 - MER105 DNA DNA -153 51 1 26 30 0 0 chr2 194424951 194424984 -56262870 + AT_rich Low_complexity Low_complexity 1 33 0 236 71 18 107 chr2 194426060 194426116 -56261738 + (CCTA)n Simple_repeat Simple_repeat 1 51 0 2101 191 22 48 chr2 194426165 194426244 -56261610 + MER39 LTR ERV1 259 339 -368 1922 155 20 0 chr2 194426244 194426540 -56261314 - AluSx SINE Alu -8 304 3 2101 191 22 48 chr2 194426540 194426921 -56260933 + MER39 LTR ERV1 339 707 0 288 0 0 0 chr2 194427428 194427460 -56260394 + (TG)n Simple_repeat Simple_repeat 2 33 0 2104 130 7 0 chr2 194427469 194427762 -56260092 - AluSx SINE Alu -17 295 1 21 36 0 0 chr2 194427917 194427945 -56259909 + AT_rich Low_complexity Low_complexity 1 28 0 1446 184 25 32 chr2 194428275 194428558 -56259296 + AluJo SINE Alu 1 281 -31 480 266 32 11 chr2 194428574 194428762 -56259092 + L1M4 LINE L1 4496 4687 -1459 2062 137 7 0 chr2 194429233 194429540 -56258314 + AluSx SINE Alu 3 311 -1 2266 92 0 3 chr2 194430287 194430579 -56257275 - AluSx SINE Alu -21 291 1 589 322 118 75 chr2 194432240 194432706 -56255148 + L3 LINE CR1 35 520 -1057 300 318 214 6 chr2 194432737 194432910 -56254944 - MIR SINE MIR -6 256 48 366 302 112 18 chr2 194432945 194433114 -56254740 + L3 LINE CR1 592 776 -801 186 373 30 0 chr2 194433327 194433394 -56254460 + L3 LINE CR1 1022 1090 -487 527 191 20 52 chr2 194433439 194433605 -56254249 - MIR SINE MIR -1 261 105 229 230 35 58 chr2 194433661 194433748 -56254106 - Charlie4 DNA MER1_type -6 1955 1871 399 281 113 6 chr2 194433806 194433966 -56253888 + L3 LINE CR1 1354 1530 -47 342 189 11 84 chr2 194435048 194435143 -56252711 + AluJb SINE Alu 210 297 -5 482 263 34 11 chr2 194435144 194435323 -56252531 + L1M4 LINE L1 4505 4687 -1459 2076 134 7 0 chr2 194435794 194436101 -56251753 + AluSx SINE Alu 3 311 -1 2266 92 0 3 chr2 194436848 194437140 -56250714 - AluSx SINE Alu -21 291 1 1479 177 43 14 chr2 194437702 194437984 -56249870 + AluJb SINE Alu 1 290 -22 360 339 172 43 chr2 194438152 194438547 -56249307 - L2 LINE L2 -3 3269 2824 189 224 52 35 chr2 194438613 194438671 -56249183 + L2 LINE L2 3213 3271 -1 1876 133 4 0 chr2 194438936 194439206 -56248648 - AluSx SINE Alu -3 309 39 1963 122 7 24 chr2 194439277 194439571 -56248283 - AluSx SINE Alu -21 291 3 207 0 0 0 chr2 194439640 194439663 -56248191 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2048 95 0 4 chr2 194440170 194440444 -56247410 + AluSq SINE Alu 39 311 -2 296 83 21 0 chr2 194440969 194441017 -56246837 + (TA)n Simple_repeat Simple_repeat 1 49 0 265 313 147 64 chr2 194441761 194442170 -56245684 + L3 LINE CR1 354 796 -781 1406 141 157 25 chr2 194442218 194442537 -56245317 - MER46B DNA MER2_type 0 236 1 220 335 71 52 chr2 194442583 194442738 -56245116 + L3 LINE CR1 954 1111 -466 566 276 180 5 chr2 194442822 194443039 -56244815 - MIR SINE MIR -6 256 2 2486 57 0 10 chr2 194443101 194443399 -56244455 + AluY SINE Alu 1 295 -16 546 275 52 24 chr2 194443401 194443612 -56244242 + L3 LINE CR1 1244 1460 -117 193 343 149 30 chr2 194444315 194444516 -56243338 - L2 LINE L2 -240 3032 2808 6501 78 24 11 chr2 194444717 194446006 -56241848 - L1PA8 LINE L1 -17 6155 4855 5434 123 39 13 chr2 194446634 194447917 -56239937 - L1PA13 LINE L1 0 6163 4851 2446 206 129 127 chr2 194448445 194448592 -56239262 + L1MC3 LINE L1 5990 6135 -1650 1418 153 56 90 chr2 194448592 194448970 -56238884 - MLT1A1 LTR MaLR 0 365 1 2446 206 129 127 chr2 194448970 194449051 -56238803 + L1MC3 LINE L1 6135 6214 -1571 2908 203 56 23 chr2 194449051 194449750 -56238104 - MER72 LTR ERV1 0 722 1 2446 206 129 127 chr2 194449750 194450613 -56237241 + L1MC3 LINE L1 6214 7181 -604 315 212 14 37 chr2 194450613 194450707 -56237147 + MLT1F1 LTR MaLR 42 156 -393 2446 206 129 127 chr2 194450707 194451158 -56236696 + L1MC3 LINE L1 7181 7630 -155 2109 150 56 31 chr2 194451158 194451571 -56236283 - MSTC LTR MaLR 0 428 6 464 118 0 0 chr2 194451623 194451691 -56236163 - MLT1B LTR MaLR -6 384 317 210 337 65 33 chr2 194451870 194451962 -56235892 + MIR3 SINE MIR 5 99 -109 23 33 0 0 chr2 194452007 194452037 -56235817 + AT_rich Low_complexity Low_complexity 1 30 0 1287 185 69 3 chr2 194452244 194452613 -56235241 - MLT1C LTR MaLR -53 414 1 353 160 67 76 chr2 194452616 194452735 -56235119 + L1MC3 LINE L1 7687 7995 0 835 258 90 26 chr2 194453365 194453675 -56234179 + LTR40c LTR ERVL 110 439 -26 1865 169 27 30 chr2 194453678 194454044 -56233810 + MLT1A1 LTR MaLR 1 365 0 1668 187 28 0 chr2 194454358 194454647 -56233207 + AluJo SINE Alu 7 303 -9 228 111 0 0 chr2 194454974 194455010 -56232844 + (TC)n Simple_repeat Simple_repeat 1 36 0 2471 151 16 23 chr2 194455302 194455733 -56232121 + MSTC LTR MaLR 1 428 0 478 239 26 8 chr2 194455852 194455969 -56231885 + MIR SINE MIR 31 149 -113 398 243 110 66 chr2 194455983 194456255 -56231599 - MER46C DNA MER2_type -49 289 6 239 358 0 0 chr2 194456255 194456336 -56231518 + MIR SINE MIR 156 236 -26 192 286 0 0 chr2 194456478 194456520 -56231334 - L2 LINE L2 -16 3256 3215 2057 61 8 19 chr2 194456521 194456785 -56231069 - AluY SINE Alu -14 297 37 1878 185 31 31 chr2 194456812 194457370 -56230484 + MLT2A2 LTR ERVL 1 554 0 445 352 71 6 chr2 194457370 194457552 -56230302 - MIR SINE MIR -65 197 4 2076 153 20 15 chr2 194457891 194458346 -56229508 + L1MC2 LINE L1 5525 6098 -246 633 297 65 3 chr2 194458432 194458738 -56229116 + L1ME3 LINE L1 5496 5820 -301 252 276 112 22 chr2 194458921 194459055 -56228799 + L1ME3 LINE L1 6003 6148 -14 346 248 105 8 chr2 194459078 194459211 -56228643 + L1ME3A LINE L1 5988 6133 -37 223 233 0 0 chr2 194459733 194459776 -56228078 + MER5B DNA MER1_type 1 43 -135 1692 101 0 0 chr2 194459779 194459997 -56227857 + AluSq SINE Alu 1 218 -95 2577 116 168 18 chr2 194459997 194460508 -56227346 + LTR10E LTR ERV1 1 588 -45 642 79 34 0 chr2 194460538 194460627 -56227227 + AluSg/x SINE Alu 211 302 -7 607 146 32 32 chr2 194460628 194460751 -56227103 + MER5B DNA MER1_type 30 152 -26 903 136 0 0 chr2 194461241 194461388 -56226466 + (TA)n Simple_repeat Simple_repeat 2 148 0 2164 105 0 0 chr2 194461455 194461741 -56226113 - AluSx SINE Alu -26 286 1 2257 88 0 14 chr2 194461917 194462213 -56225641 - AluY SINE Alu -19 292 1 877 172 61 11 chr2 194462286 194462466 -56225388 + MER5A DNA MER1_type 1 189 0 197 327 183 20 chr2 194462751 194462953 -56224901 - L2 LINE L2 -839 2475 2241 1531 168 82 10 chr2 194463095 194463386 -56224468 - AluJb SINE Alu 0 312 1 462 249 73 27 chr2 194463459 194463698 -56224156 + Charlie8 DNA MER1_type 84 1427 -990 1373 198 79 25 chr2 194463885 194464163 -56223691 - AluJo SINE Alu -18 294 2 2279 105 0 6 chr2 194464774 194465088 -56222766 - AluSx SINE Alu 0 312 1 663 205 139 0 chr2 194467909 194468060 -56219794 + MER45A DNA AcHobo 6 177 -1 296 298 73 60 chr2 194468062 194468213 -56219641 + MIR SINE MIR 65 217 -45 365 320 88 22 chr2 194468362 194468590 -56219264 - L1MC4 LINE L1 -1 8041 7799 2102 194 38 79 chr2 194468599 194468825 -56219029 - L1ME2 LINE L1 -10 6154 5920 1752 174 0 27 chr2 194468825 194469123 -56218731 - AluJo SINE Alu -22 290 1 2102 194 38 79 chr2 194469123 194469526 -56218328 - L1ME2 LINE L1 -244 5920 5551 3480 175 71 38 chr2 194469547 194470479 -56217375 + L1MB8 LINE L1 5202 6163 -15 777 170 135 0 chr2 194470489 194470689 -56217165 - L1ME2 LINE L1 -636 5528 5302 466 174 0 0 chr2 194470697 194470783 -56217071 - AluSp SINE Alu -8 305 220 1140 94 7 0 chr2 194470783 194470932 -56216922 - AluSp SINE Alu -163 150 1 1286 213 202 24 chr2 194470987 194471442 -56216412 - MLT1F LTR MaLR -6 536 1 817 175 122 44 chr2 194471710 194471962 -56215892 + MER33 DNA MER1_type 1 281 -2304 2017 110 3 33 chr2 194471962 194472263 -56215591 + AluSq SINE Alu 1 292 -21 817 175 122 44 chr2 194472263 194472307 -56215547 + MER33 DNA MER1_type 281 320 -4 205 370 68 10 chr2 194472361 194472553 -56215301 + L2 LINE L2 2815 3017 -255 249 33 0 0 chr2 194472646 194472676 -56215178 + (TC)n Simple_repeat Simple_repeat 1 30 0 616 237 8 0 chr2 194472696 194472814 -56215040 - FLAM_A SINE Alu -14 119 1 191 360 13 13 chr2 194474829 194474904 -56212950 - L2 LINE L2 -172 3100 3026 216 300 0 29 chr2 194475009 194475079 -56212775 - L2 LINE L2 -560 2754 2687 261 200 0 71 chr2 194475649 194475734 -56212120 + L1ME4a LINE L1 5989 6067 -54 21 57 0 0 chr2 194476213 194476248 -56211606 + AT_rich Low_complexity Low_complexity 1 35 0 6690 187 30 8 chr2 194476370 194477914 -56209940 + L1PB4 LINE L1 3634 5212 -934 520 144 0 9 chr2 194478036 194478147 -56209707 + L1PB4 LINE L1 5219 5328 -818 509 130 9 96 chr2 194478150 194478265 -56209589 + FRAM SINE Alu 71 175 -1 367 130 0 0 chr2 194478265 194478334 -56209520 + L1PB4 LINE L1 5322 5390 -776 3681 159 33 17 chr2 194478336 194479027 -56208827 + L1PB4 LINE L1 5455 6156 0 2187 110 0 7 chr2 194479707 194479999 -56207855 + AluY SINE Alu 2 291 -20 1248 179 0 63 chr2 194480369 194480621 -56207233 - MER8 DNA MER2_type -2 237 2 2126 133 0 13 chr2 194482473 194482773 -56205081 - AluSx SINE Alu -16 296 1 347 238 186 29 chr2 194483026 194483198 -56204656 + L1ME4a LINE L1 5809 6007 -114 2814 100 68 7 chr2 194483285 194483726 -56204128 - L1PA8 LINE L1 -2 6170 5703 23 54 0 0 chr2 194484108 194484145 -56203709 + AT_rich Low_complexity Low_complexity 1 37 0 610 320 81 32 chr2 194485310 194485657 -56202197 - LTR33 LTR ERVL -157 364 1 3024 154 71 96 chr2 194485676 194485857 -56201997 - MER44D DNA MER2_type -1886 601 417 1880 165 30 0 chr2 194485857 194486160 -56201694 + AluJo SINE Alu 1 312 0 3024 154 71 96 chr2 194486160 194486726 -56201128 - MER44D DNA MER2_type -2070 417 1 21 0 0 0 chr2 194486934 194486955 -56200899 + AT_rich Low_complexity Low_complexity 1 21 0 525 292 113 24 chr2 194486973 194487309 -56200545 - L1ME4a LINE L1 -57 6064 5699 2423 132 60 5 chr2 194487327 194487729 -56200125 + MSTB LTR MaLR 1 424 -2 352 197 26 0 chr2 194487779 194487855 -56199999 + MER58 DNA MER1_type 128 2410 -10 481 271 0 36 chr2 194487859 194488025 -56199829 - L1ME4a LINE L1 -472 5649 5490 637 249 72 17 chr2 194488494 194488675 -56199179 + MIR SINE MIR 33 223 -39 205 365 132 14 chr2 194488698 194488917 -56198937 - L2 LINE L2 -339 2975 2731 2115 116 3 0 chr2 194488970 194489286 -56198568 + AluSx SINE Alu 2 318 0 274 236 94 0 chr2 194489342 194489448 -56198406 - HAL1 LINE L1 -109 2398 2283 368 291 109 89 chr2 194490590 194491151 -56196703 + L1M2 LINE L1 678 1249 -5600 2175 105 0 22 chr2 194492678 194492992 -56194862 + AluSx SINE Alu 6 312 0 1837 173 16 0 chr2 194493560 194493866 -56193988 - AluJb SINE Alu -1 311 1 2453 82 0 0 chr2 194493969 194494272 -56193582 - AluY SINE Alu -8 303 1 25 75 0 0 chr2 194494356 194494409 -56193445 + AT_rich Low_complexity Low_complexity 1 53 0 24 77 0 0 chr2 194494552 194494604 -56193250 + AT_rich Low_complexity Low_complexity 1 52 0 2295 85 0 0 chr2 194494817 194495131 -56192723 + AluSx SINE Alu 1 314 0 2139 135 30 0 chr2 194495340 194495710 -56192144 - L1MB3 LINE L1 -7 6176 5796 334 281 23 127 chr2 194495740 194495961 -56191893 - MIR3 SINE MIR -7 201 4 2068 138 3 3 chr2 194496117 194496414 -56191440 + AluSx SINE Alu 1 297 -15 2171 123 3 0 chr2 194496812 194497104 -56190750 - AluSx SINE Alu -17 295 3 2264 259 69 18 chr2 194498295 194499094 -56188760 - L1ME3A LINE L1 -7 6163 5324 245 253 46 23 chr2 194499094 194499181 -56188673 - L2 LINE L2 -249 3023 2935 251 292 58 44 chr2 194499841 194499978 -56187876 - Tigger8 DNA MER2_type -499 167 29 672 272 63 25 chr2 194500501 194500740 -56187114 - MIR SINE MIR -4 258 11 1432 206 44 15 chr2 194501322 194501662 -56186192 + MLT1B LTR MaLR 3 352 -38 189 0 0 0 chr2 194501887 194501908 -56185946 + (TG)n Simple_repeat Simple_repeat 1 21 0 1124 220 54 4 chr2 194502031 194502272 -56185582 + MIR SINE MIR 7 259 -3 197 343 55 48 chr2 194502437 194502583 -56185271 + MER5B DNA MER1_type 27 173 -5 * 456 331 7 14 chr2 194502461 194502600 -56185254 - MER5A DNA MER1_type -50 139 2 664 138 8 16 chr2 194502778 194502901 -56184953 + L1PA13 LINE L1 6042 6163 0 416 271 109 30 chr2 194504254 194504557 -56183297 - L1ME4a LINE L1 -5 6116 5790 371 316 121 21 chr2 194504599 194504884 -56182970 - L1ME4a LINE L1 -426 5695 5382 2260 92 23 13 chr2 194505034 194505338 -56182516 - AluSx SINE Alu -5 307 1 1169 92 0 0 chr2 194505338 194505479 -56182375 - AluSq/x SINE Alu -171 141 1 309 233 35 95 chr2 194505529 194505645 -56182209 + MIR SINE MIR 46 154 -108 2186 135 0 0 chr2 194505979 194506282 -56181572 + AluJb SINE Alu 1 303 -9 1760 84 0 0 chr2 194506323 194506548 -56181306 + AluY SINE Alu 87 311 0 370 171 57 0 chr2 194507437 194507525 -56180329 - L1ME4a LINE L1 -27 6094 6002 256 274 89 28 chr2 194507586 194507765 -56180089 - L1ME4a LINE L1 -68 6053 5864 1009 231 60 20 chr2 194507970 194508221 -56179633 - MIR SINE MIR 0 262 2 243 284 147 32 chr2 194510093 194510188 -56177666 + MIR3 SINE MIR 82 187 -21 1792 116 8 4 chr2 194510189 194510439 -56177415 - AluSx SINE Alu -5 307 57 312 248 211 8 chr2 194510847 194510980 -56176874 - L2 LINE L2 -441 2873 2714 1800 152 0 0 chr2 194511206 194511469 -56176385 + AluSx SINE Alu 38 300 -12 2054 211 34 0 chr2 194511676 194512093 -56175761 - MLT1F1 LTR MaLR -44 523 93 5927 31 0 0 chr2 194512387 194513088 -56174766 - L1PA4 LINE L1 0 6155 5455 3272 41 14 0 chr2 194513088 194513564 -56174290 + L1PA4 LINE L1 4961 5440 -715 1193 105 0 17 chr2 194516270 194516451 -56171403 + L1PA10 LINE L1 5979 6156 -12 22 70 0 0 chr2 194516864 194516907 -56170947 + AT_rich Low_complexity Low_complexity 1 43 0 385 264 88 49 chr2 194516923 194517310 -56170544 - L1ME4a LINE L1 -44 6077 5676 1667 172 33 30 chr2 194517435 194517737 -56170117 - AluJo SINE Alu -9 303 1 348 24 0 0 chr2 194520133 194520174 -56167680 + (TG)n Simple_repeat Simple_repeat 1 41 0 679 249 47 16 chr2 194520268 194520461 -56167393 + MIR SINE MIR 26 221 -41 1923 173 0 3 chr2 194520641 194520948 -56166906 + AluJb SINE Alu 1 306 -6 1287 184 61 105 chr2 194522307 194522698 -56165156 - MLT1A2 LTR MaLR 0 374 1 1014 191 162 21 chr2 194523758 194523993 -56163861 - AluJo SINE Alu -19 293 26 2179 266 132 19 chr2 194523995 194525068 -56162786 - HAL1 LINE L1 -160 2347 1153 414 227 148 0 chr2 194525099 194525227 -56162627 - L1ME3A LINE L1 -61 6109 5963 4765 200 63 28 chr2 194525228 194526503 -56161351 - L1MD1 LINE L1 -8 6628 5400 2313 87 7 0 chr2 194526503 194526801 -56161053 - AluSp SINE Alu -13 300 1 4765 200 63 28 chr2 194526801 194527994 -56159860 - L1MD1 LINE L1 -1236 5400 4067 * 6483 178 127 33 chr2 194527992 194528661 -56159193 - L1MD1 LINE L1 -4638 1902 1297 962 188 6 0 chr2 194528661 194528837 -56159017 - L1PB4 LINE L1 -14 6142 5966 6483 178 127 33 chr2 194528837 194529895 -56157959 - L1MD1 LINE L1 -5243 1297 12 2382 109 0 0 chr2 194529895 194530199 -56157655 - AluSq SINE Alu -9 304 1 1379 229 127 0 chr2 194530208 194530635 -56157219 - L1ME3A LINE L1 -202 5968 5488 913 166 41 0 chr2 194530636 194530805 -56157049 - MER46A DNA MER2_type 0 236 61 1908 146 7 0 chr2 194530822 194531140 -56156714 - AluSq SINE Alu 0 320 1 670 249 25 45 chr2 194531140 194531395 -56156459 - L1ME3A LINE L1 -676 5486 5227 198 0 0 0 chr2 194531395 194531417 -56156437 + (TG)n Simple_repeat Simple_repeat 2 23 0 670 249 25 45 chr2 194531417 194531495 -56156359 - L1ME3A LINE L1 -935 5227 5149 2121 104 45 7 chr2 194531495 194531782 -56156072 - AluSx SINE Alu -14 298 1 670 249 25 45 chr2 194531782 194531961 -56155893 - L1ME3A LINE L1 -1013 5149 4987 2097 119 0 42 chr2 194532062 194532374 -56155480 - AluSx SINE Alu -13 299 1 247 235 0 0 chr2 194532380 194532431 -56155423 - MER5A DNA MER1_type -118 71 21 224 326 95 34 chr2 194533043 194533190 -56154664 - MER5B DNA MER1_type -22 156 1 646 178 0 11 chr2 194533251 194533616 -56154238 + CT-rich Low_complexity Low_complexity 1 360 0 672 183 0 0 chr2 194533644 194534107 -56153747 + CT-rich Low_complexity Low_complexity 1 463 0 298 262 24 0 chr2 194534538 194534622 -56153232 + (TA)n Simple_repeat Simple_repeat 1 86 0 492 253 116 59 chr2 194534679 194534952 -56152902 - Charlie8 DNA MER1_type -2132 285 1 1547 158 3 68 chr2 194535029 194535339 -56152515 - AluJb SINE Alu -22 290 1 1590 98 21 0 chr2 194535954 194536188 -56151666 - L1MA1 LINE L1 -4 6298 6060 531 271 23 0 chr2 194537622 194537751 -56150103 + MIR SINE MIR 8 139 -123 2299 92 7 0 chr2 194539128 194539420 -56148434 + AluSc SINE Alu 1 294 -15 408 146 0 0 chr2 194539710 194539799 -56148055 + (CA)n Simple_repeat Simple_repeat 2 90 0 2757 134 108 12 chr2 194540133 194540706 -56147148 - L1MA8 LINE L1 -12 6279 5652 1707 114 8 28 chr2 194540708 194540963 -56146891 - AluJb SINE Alu 0 312 63 2133 95 0 76 chr2 194541202 194541517 -56146337 - AluSx SINE Alu -21 291 1 24 32 0 0 chr2 194541614 194541645 -56146209 + AT_rich Low_complexity Low_complexity 1 31 0 2005 106 0 4 chr2 194541676 194541941 -56145913 - AluSg SINE Alu -15 295 32 1496 232 109 51 chr2 194542193 194542457 -56145397 + L2 LINE L2 2459 2706 -607 3791 144 35 17 chr2 194542457 194543172 -56144682 + L1PB4 LINE L1 5429 6156 0 1496 232 109 51 chr2 194543172 194543297 -56144557 + L2 LINE L2 2706 2822 -491 1967 164 25 17 chr2 194543297 194543657 -56144197 + MLT1A1 LTR MaLR 1 363 -2 1496 232 109 51 chr2 194543657 194544048 -56143806 + L2 LINE L2 2822 3294 -19 1181 162 70 41 chr2 194544907 194545221 -56142633 + MER33 DNA MER1_type 2 324 0 737 211 0 0 chr2 194545391 194545514 -56142340 - FLAM_C SINE Alu -20 123 1 1459 114 64 15 chr2 194545532 194545796 -56142058 - L1MB3 LINE L1 -7 6176 5900 261 0 0 0 chr2 194545799 194545828 -56142026 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 2305 43 4 4 chr2 194545829 194546129 -56141725 - AluY SINE Alu 0 300 1 572 262 10 35 chr2 194546493 194546695 -56141159 - MLT1J LTR MaLR 0 511 315 447 269 159 0 chr2 194546765 194546910 -56140944 - MLT1J LTR MaLR -342 169 2 211 37 0 0 chr2 194547852 194547879 -56139975 + (TTTG)n Simple_repeat Simple_repeat 2 120 0 2228 103 0 0 chr2 194547879 194548162 -56139692 - AluSq SINE Alu -1 309 1 724 253 56 11 chr2 194548364 194548542 -56139312 + MER45B DNA AcHobo 3 188 -852 3934 185 40 53 chr2 194549106 194549700 -56138154 + MER45B DNA AcHobo 178 759 -822 1739 170 37 0 chr2 194549700 194549994 -56137860 + AluSx SINE Alu 1 305 -7 3934 185 40 53 chr2 194549994 194550271 -56137583 + MER45B DNA AcHobo 759 1038 -2 1837 144 13 10 chr2 194550637 194550936 -56136918 - AluSx SINE Alu -11 301 2 2321 84 3 19 chr2 194550937 194551246 -56136608 - AluSc SINE Alu -5 304 1 2077 99 3 33 chr2 194551247 194551549 -56136305 - AluSc SINE Alu -16 293 1 2181 116 0 13 chr2 194551550 194551852 -56136002 - AluSx SINE Alu -14 298 1 349 233 26 9 chr2 194552044 194552159 -56135695 + L1M4 LINE L1 5188 5302 -844 2225 121 0 0 chr2 194552223 194552529 -56135325 - AluSx SINE Alu -6 306 1 322 276 61 0 chr2 194552529 194552627 -56135227 - L1ME LINE L1 -469 5652 5549 732 131 40 0 chr2 194552638 194552737 -56135117 + FLAM_C SINE Alu 1 103 -40 281 264 91 26 chr2 194552753 194552925 -56134929 - L1ME LINE L1 -577 5544 5360 217 328 29 76 chr2 194553009 194553180 -56134674 + L3 LINE CR1 1327 1489 -88 21 36 0 0 chr2 194553221 194553249 -56134605 + AT_rich Low_complexity Low_complexity 1 28 0 1555 160 78 8 chr2 194553249 194553517 -56134337 - AluJo SINE Alu -25 287 1 2022 133 0 3 chr2 194553538 194553907 -56133947 - AluSx SINE Alu 0 368 1 256 333 0 7 chr2 194554056 194554194 -56133660 + L2 LINE L2 2250 2386 -928 1569 196 5 102 chr2 194554402 194554561 -56133293 + MLT1A1 LTR MaLR 1 174 -191 2240 110 3 0 chr2 194554561 194554853 -56133001 + AluSx SINE Alu 1 293 -19 1569 196 5 102 chr2 194554853 194555097 -56132757 + MLT1A1 LTR MaLR 174 365 0 457 243 70 48 chr2 194555632 194555909 -56131945 + L1MC4a LINE L1 5699 5993 -128 542 288 0 0 chr2 194556067 194556192 -56131662 + L2 LINE L2 3187 3311 -2 2411 87 0 16 chr2 194556375 194556687 -56131167 - AluSg SINE Alu -3 307 1 1682 154 6 65 chr2 194556903 194557228 -56130626 + AluJb SINE Alu 1 306 -6 21 57 0 0 chr2 194557702 194557737 -56130117 + AT_rich Low_complexity Low_complexity 1 35 0 244 226 32 0 chr2 194558197 194558259 -56129595 + L3 LINE CR1 1094 1157 -420 453 296 83 32 chr2 194558260 194558537 -56129317 - L1M4 LINE L1 -1745 4401 4111 988 178 0 0 chr2 194558723 194558880 -56128974 - FRAM SINE Alu -9 157 1 2515 180 78 86 chr2 194558993 194559753 -56128101 - L1ME1 LINE L1 -7 6159 5406 322 205 15 52 chr2 194559755 194559893 -56127961 - MER20 DNA MER1_type -3 216 1 452 198 0 0 chr2 194559893 194559974 -56127880 - L1ME1 LINE L1 -753 5413 5333 * 872 147 35 0 chr2 194559967 194560110 -56127744 - L1ME LINE L1 -350 5816 5669 3421 220 82 40 chr2 194560145 194560456 -56127398 - L1ME1 LINE L1 -836 5310 5014 792 146 8 46 chr2 194560456 194560586 -56127268 - FLAM_A SINE Alu -4 129 5 3421 220 82 40 chr2 194560586 194560923 -56126931 - L1ME1 LINE L1 -1132 5014 4693 1813 166 20 3 chr2 194560923 194561218 -56126636 - AluJo SINE Alu -12 300 1 3421 220 82 40 chr2 194561218 194561330 -56126524 - L1ME1 LINE L1 -1453 4693 4587 2146 115 0 0 chr2 194561330 194561609 -56126245 + AluSg SINE Alu 18 296 -14 3421 220 82 40 chr2 194561609 194562737 -56125117 - L1ME1 LINE L1 -1559 4587 3184 4155 215 102 85 chr2 194562739 194563556 -56124298 + L1MD3 LINE L1 5080 5881 -2114 2433 151 47 24 chr2 194563556 194563979 -56123875 + Tigger2a DNA MER2_type 2 434 0 4155 215 102 85 chr2 194563979 194564101 -56123753 + L1MD3 LINE L1 5881 5999 -1996 468 211 0 67 chr2 194564101 194564205 -56123649 + Tigger2 DNA MER2_type 2612 2708 -10 4155 215 102 85 chr2 194564205 194565105 -56122749 + L1MD3 LINE L1 5999 6882 -1113 2380 131 36 31 chr2 194565105 194565466 -56122388 + L1MB3 LINE L1 5767 6132 -51 2380 68 3 0 chr2 194565466 194565761 -56122093 + AluY SINE Alu 1 296 -15 2380 131 36 31 chr2 194565761 194565812 -56122042 + L1MB3 LINE L1 6132 6181 -2 4155 215 102 85 chr2 194565812 194566328 -56121526 + L1MD3 LINE L1 6882 7387 -608 1403 185 19 131 chr2 194566328 194566739 -56121115 - MLT1A1 LTR MaLR 0 365 1 4155 215 102 85 chr2 194566739 194567296 -56120558 + L1MD3 LINE L1 7387 7990 -5 32 43 0 0 chr2 194567296 194567342 -56120512 + AT_rich Low_complexity Low_complexity 1 46 0 1943 237 79 34 chr2 194567342 194567701 -56120153 + L1ME3A LINE L1 5470 5811 -359 2002 135 72 106 chr2 194567701 194567750 -56120104 - MSTA LTR MaLR 0 428 379 1472 174 6 71 chr2 194567750 194567888 -56119966 + AluJb SINE Alu 12 157 -155 2394 96 0 3 chr2 194567888 194568202 -56119652 + AluSq SINE Alu 1 313 0 1472 174 6 71 chr2 194568202 194568385 -56119469 + AluJb SINE Alu 157 312 0 2002 135 72 106 chr2 194568385 194568621 -56119233 - MSTA LTR MaLR -49 379 161 1933 106 8 0 chr2 194568621 194568876 -56118978 - AluSg SINE Alu -53 257 1 2002 135 72 106 chr2 194568876 194569032 -56118822 - MSTA LTR MaLR -267 161 1 1943 237 79 34 chr2 194569032 194569046 -56118808 + L1ME3A LINE L1 5811 5823 -347 962 141 0 15 chr2 194569046 194569181 -56118673 + AluJo SINE Alu 1 133 -169 1943 237 79 34 chr2 194569181 194569477 -56118377 + L1ME3A LINE L1 5823 6170 0 200 305 71 45 chr2 194569806 194569960 -56117894 + L2 LINE L2 3124 3281 -32 1052 265 105 47 chr2 194570746 194570933 -56116921 + MLT1J LTR MaLR 10 185 -326 2319 103 3 3 chr2 194570933 194571244 -56116610 - AluSq SINE Alu -2 311 1 1052 265 105 47 chr2 194571244 194571424 -56116430 + MLT1J LTR MaLR 185 408 -103 442 45 0 60 chr2 194571424 194571491 -56116363 - L1PA10 LINE L1 -3 6165 6103 1052 265 105 47 chr2 194571491 194571549 -56116305 + MLT1J LTR MaLR 408 461 -50 187 241 229 12 chr2 194571617 194571700 -56116154 - L2 LINE L2 -95 3218 3118 1237 293 118 12 chr2 194571794 194572370 -56115484 + L2 LINE L2 1981 2617 -697 547 143 0 0 chr2 194572381 194572458 -56115396 - AluJ/FRAM SINE Alu -12 300 224 997 150 0 0 chr2 194572558 194572698 -56115156 + AluJo SINE Alu 141 280 -32 180 0 0 0 chr2 194572698 194572718 -56115136 + (GAAAA)n Simple_repeat Simple_repeat 1 20 0 267 330 136 40 chr2 194572720 194572904 -56114950 - L2 LINE L2 -618 2696 2531 2262 193 110 2 chr2 194572904 194573360 -56114494 + MLT1D LTR MaLR 1 505 0 267 330 136 40 chr2 194573360 194573474 -56114380 - L2 LINE L2 -783 2531 2429 2296 112 0 0 chr2 194573474 194573768 -56114086 + AluSx SINE Alu 1 294 -18 267 330 136 40 chr2 194573768 194574113 -56113741 - L2 LINE L2 -885 2429 1990 422 240 103 20 chr2 194574245 194574391 -56113463 + MER69A DNA AcHobo 4 161 -16 386 304 179 13 chr2 194574398 194574622 -56113232 + MIR SINE MIR 2 262 0 305 274 112 74 chr2 194575197 194575412 -56112442 - L1M2 LINE L1 -5837 1012 790 375 256 94 124 chr2 194575437 194575484 -56112370 + L1M2 LINE L1 1045 1092 -5757 189 74 0 0 chr2 194575484 194575511 -56112343 + (CCTCG)n Simple_repeat Simple_repeat 4 30 0 375 256 94 124 chr2 194575511 194575834 -56112020 + L1M2 LINE L1 1092 1404 -5445 189 0 0 0 chr2 194575857 194575878 -56111976 + (TCCC)n Simple_repeat Simple_repeat 1 21 0 411 297 74 14 chr2 194576611 194576759 -56111095 + MIR3 SINE MIR 51 207 -1 369 329 79 7 chr2 194577398 194577550 -56110304 - MIR SINE MIR -72 190 28 2343 94 0 0 chr2 194577938 194578237 -56109617 + AluSg1 SINE Alu 1 299 -10 206 396 61 24 chr2 194678989 194679153 -56008701 + L3 LINE CR1 1117 1286 -291 34 49 0 37 chr2 194680641 194680722 -56007132 + AT_rich Low_complexity Low_complexity 1 78 0 225 0 0 0 chr2 194681937 194681962 -56005892 + (T)n Simple_repeat Simple_repeat 1 25 0 206 396 61 24 chr2 194682419 194682583 -56005271 - L3 LINE CR1 -291 1286 1117 240 111 0 0 chr2 194683250 194683286 -56004568 + (T)n Simple_repeat Simple_repeat 1 36 0 777 186 8 0 chr2 194683989 194684118 -56003736 - FLAM_A SINE Alu -2 131 2 656 291 50 40 chr2 194684161 194684709 -56003145 - L1M3 LINE L1 -349 5822 5272 216 86 0 0 chr2 194684711 194684746 -56003108 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2011 128 3 0 chr2 194684748 194685038 -56002816 - AluSx SINE Alu -21 291 1 13548 56 83 7 chr2 194685801 194687752 -56000102 - L1P LINE L1 -4044 2102 3 7929 160 80 34 chr2 194689772 194691821 -55996033 - LOR1-int LTR ERV1 -1523 4740 3183 2268 106 0 0 chr2 194691821 194692114 -55995740 - AluSg SINE Alu -17 293 1 7929 160 80 34 chr2 194692114 194692311 -55995543 - LOR1-int LTR ERV1 -3080 3183 2997 998 248 93 11 chr2 194692709 194692979 -55994875 + LTR16C LTR ERVL 200 491 0 4518 228 49 37 chr2 194693487 194694421 -55993433 + HsTC2 DNA Tc2 7 1145 -753 6425 54 15 2 chr2 194694421 194695240 -55992614 + L1PA7 LINE L1 5322 6150 -4 4518 228 49 37 chr2 194695240 194695918 -55991936 + HsTC2 DNA Tc2 1145 1813 -85 965 269 30 20 chr2 194696035 194696437 -55991417 + L1M4 LINE L1 2517 2922 -3224 674 262 215 50 chr2 194696438 194697346 -55990508 + L1M4 LINE L1 4176 5233 -913 354 250 0 52 chr2 194698744 194698860 -55988994 - MER102a DNA MER1_type -1 329 220 1966 114 11 0 chr2 194699181 194699454 -55988400 + AluSp SINE Alu 30 305 -8 1660 186 6 22 chr2 194699946 194700258 -55987596 + AluJo SINE Alu 5 311 -1 215 338 74 49 chr2 194700288 194700572 -55987282 + L2 LINE L2 2384 2674 -640 2234 119 3 0 chr2 194700915 194701217 -55986637 - AluSx SINE Alu -9 303 1 208 313 69 49 chr2 194701718 194701862 -55985992 + MIR3 SINE MIR 6 152 -56 252 214 0 43 chr2 194702187 194702257 -55985597 - L1ME4a LINE L1 -83 6038 5972 230 314 9 9 chr2 194702272 194702377 -55985477 + (TA)n Simple_repeat Simple_repeat 2 106 0 2053 113 3 14 chr2 194702384 194702691 -55985163 - AluSx SINE Alu 0 304 1 780 254 63 0 chr2 194703155 194703439 -55984415 - L1M4 LINE L1 -2630 3516 3215 533 265 198 27 chr2 194703964 194704337 -55983517 + LTR16A1 LTR ERVL 15 451 -6 308 278 305 5 chr2 194704810 194704997 -55982857 + MIR SINE MIR 20 262 0 656 273 67 87 chr2 194705115 194705368 -55982486 - MIR SINE MIR 0 262 15 541 263 86 29 chr2 194705558 194705767 -55982087 + MIR SINE MIR 15 235 -27 587 261 87 33 chr2 194706808 194707176 -55980678 - L1ME4a LINE L1 -4 6117 5730 750 174 46 26 chr2 194707268 194707463 -55980391 + L1MC4a LINE L1 7607 7805 -3 3031 136 125 3 chr2 194708289 194708863 -55978991 - LTR48B LTR ERV1 0 644 1 21 36 0 0 chr2 194708887 194708915 -55978939 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 194709319 194709341 -55978513 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 25 31 0 0 chr2 194710788 194710820 -55977034 + AT_rich Low_complexity Low_complexity 1 32 0 1544 103 26 15 chr2 194711679 194711950 -55975904 + L1MA8 LINE L1 6008 6281 -10 203 183 33 17 chr2 194713042 194713102 -55974752 + (TTAA)n Simple_repeat Simple_repeat 2 62 0 1811 152 10 10 chr2 194713740 194714036 -55973818 + AluJo SINE Alu 1 296 -16 1964 164 0 3 chr2 194715377 194715689 -55972165 + AluSx SINE Alu 1 311 -1 1107 110 0 0 chr2 194717635 194717804 -55970050 + AluSg/x SINE Alu 136 304 0 2303 106 0 3 chr2 194718198 194718509 -55969345 + AluSg SINE Alu 1 310 0 184 256 0 23 chr2 194718574 194718617 -55969237 + MIR SINE MIR 17 58 -150 2638 123 36 18 chr2 194718712 194719013 -55968841 + L1MA4 LINE L1 5788 6103 -197 2280 93 3 0 chr2 194719013 194719315 -55968539 + AluSx SINE Alu 1 303 -9 2638 123 36 18 chr2 194719315 194719507 -55968347 + L1MA4 LINE L1 6103 6290 -10 21 57 0 0 chr2 194720406 194720441 -55967413 + AT_rich Low_complexity Low_complexity 1 35 0 1074 90 0 0 chr2 194720442 194720576 -55967278 + AluY SINE Alu 1 134 -177 2351 68 0 64 chr2 194720576 194720902 -55966952 + AluY SINE Alu 1 305 -6 416 280 86 68 chr2 194720905 194721184 -55966670 - L1ME4a LINE L1 -80 6041 5758 581 254 109 32 chr2 194721711 194721938 -55965916 - L1ME4a LINE L1 -3 6118 5855 2039 152 7 0 chr2 194721938 194722248 -55965606 - AluJb SINE Alu 0 312 1 581 254 109 32 chr2 194722248 194722358 -55965496 - L1ME4a LINE L1 -266 5855 5755 213 343 0 0 chr2 194722654 194722724 -55965130 + MIR SINE MIR 32 101 -107 743 300 39 13 chr2 194724108 194724341 -55963513 - MIR SINE MIR -22 240 2 469 242 23 16 chr2 194724588 194724716 -55963138 + MIR SINE MIR 66 194 -68 198 71 0 0 chr2 194725040 194725068 -55962786 + (CA)n Simple_repeat Simple_repeat 1 28 0 234 224 61 0 chr2 194725516 194725565 -55962289 + L3 LINE CR1 1523 1574 -3 317 275 14 0 chr2 194726381 194726450 -55961404 + L2 LINE L2 3239 3308 -5 2440 75 0 7 chr2 194726619 194726927 -55960927 + AluY SINE Alu 1 306 -5 2474 68 0 37 chr2 194727276 194727601 -55960253 - AluSq SINE Alu 0 313 1 2267 120 0 0 chr2 194728129 194728428 -55959426 + AluSx SINE Alu 1 299 -13 3025 215 38 59 chr2 194728532 194729317 -55958537 - MER21B LTR ERV1 -74 789 21 274 232 0 29 chr2 194729354 194729423 -55958431 - MER21B LTR ERV1 -796 67 1 687 237 127 24 chr2 194729529 194729939 -55957915 + MER115 DNA AcHobo 177 680 -13 396 271 24 0 chr2 194730737 194730822 -55957032 - MER5A DNA MER1_type -77 112 26 2274 241 85 58 chr2 194730919 194731943 -55955911 - HAL1 LINE L1 -173 2334 1283 454 288 31 23 chr2 194732212 194732469 -55955385 - L1ME3A LINE L1 -234 5936 5678 241 263 12 0 chr2 194732545 194732625 -55955229 - L1ME3A LINE L1 -538 5632 5552 511 236 57 43 chr2 194732656 194732957 -55954897 - HAL1 LINE L1 -1215 1292 988 347 243 92 44 chr2 194732987 194733016 -55954838 - L1MC5 LINE L1 -54 7907 7881 2439 84 3 0 chr2 194733016 194733324 -55954530 + AluSp SINE Alu 1 309 -4 347 243 92 44 chr2 194733324 194733545 -55954309 - L1MC5 LINE L1 -80 7881 7645 192 97 0 0 chr2 194733739 194733770 -55954084 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 377 282 92 18 chr2 194733777 194733940 -55953914 - HAL1 LINE L1 -1590 917 743 337 305 147 62 chr2 194733996 194734288 -55953566 - HAL1 LINE L1 -1801 706 390 233 338 0 0 chr2 194734454 194734528 -55953326 - HAL1 LINE L1 -2431 76 3 36 0 0 0 chr2 194734842 194734878 -55952976 + AT_rich Low_complexity Low_complexity 1 36 0 2049 143 0 6 chr2 194735231 194735545 -55952309 + AluJb SINE Alu 1 312 0 637 250 0 0 chr2 194738642 194738758 -55949096 + FLAM_A SINE Alu 1 116 -17 1455 156 36 25 chr2 194739265 194739541 -55948313 - MER50 LTR ERV1 -23 711 433 1044 147 54 40 chr2 194739535 194739759 -55948095 - MER50 LTR ERV1 -505 229 3 * 488 324 76 13 chr2 194740024 194740249 -55947605 - MIR SINE MIR -1 261 23 248 350 78 19 chr2 194741305 194741408 -55946446 + L2 LINE L2 3150 3258 -14 2463 82 0 3 chr2 194741650 194741954 -55945900 - AluY SINE Alu -8 303 1 289 254 28 0 chr2 194743675 194743746 -55944108 + L2 LINE L2 3240 3312 -1 258 301 140 35 chr2 194745855 194745998 -55941856 - L3b LINE CR1 -121 1462 1305 25 0 0 0 chr2 194746931 194746956 -55940898 + AT_rich Low_complexity Low_complexity 1 25 0 284 297 68 34 chr2 194747004 194747122 -55940732 + MIR3 SINE MIR 87 208 0 334 325 30 46 chr2 194747865 194748062 -55939792 + L3b LINE CR1 1305 1498 -85 2411 150 51 5 chr2 194748321 194748734 -55939120 - MSTB1 LTR MaLR 0 432 1 6700 196 80 27 chr2 194748734 194750180 -55937674 - MSTB1-int LTR MaLR 0 1651 114 2154 109 10 3 chr2 194750180 194750474 -55937380 + AluSc SINE Alu 3 298 -11 6700 196 80 27 chr2 194750474 194750595 -55937259 - MSTB1-int LTR MaLR -1537 114 1 1257 172 4 4 chr2 194750595 194750827 -55937027 - MSTB1 LTR MaLR 0 432 201 490 211 69 9 chr2 194751317 194751446 -55936408 - L1ME1 LINE L1 0 6184 6040 185 302 127 0 chr2 194751544 194751607 -55936247 + L2 LINE L2 2682 2752 -562 1631 182 124 51 chr2 194751627 194751894 -55935960 + Charlie4a DNA MER1_type 6 252 -1709 1598 178 23 26 chr2 194751894 194752018 -55935836 + AluJb SINE Alu 1 124 -188 207 0 0 0 chr2 194752018 194752041 -55935813 + (TA)n Simple_repeat Simple_repeat 1 23 0 1598 178 23 26 chr2 194752041 194752220 -55935634 + AluJb SINE Alu 124 303 -9 1631 182 124 51 chr2 194752220 194752419 -55935435 + Charlie4a DNA MER1_type 252 506 -2 270 81 0 0 chr2 194752704 194752741 -55935113 + (CA)n Simple_repeat Simple_repeat 2 38 0 226 325 117 33 chr2 194752834 194752954 -55934900 + L2 LINE L2 3137 3266 -6 807 77 0 0 chr2 194753366 194753470 -55934384 + AluY SINE Alu 191 294 -17 897 195 58 0 chr2 194753831 194754021 -55933833 - MER105 DNA DNA -3 201 1 340 310 58 45 chr2 194754157 194754399 -55933455 - L2 LINE L2 -217 3055 2811 805 160 7 28 chr2 194754552 194754696 -55933158 + MER45A DNA AcHobo 38 178 0 350 214 116 42 chr2 194755897 194756112 -55931742 - L1ME4a LINE L1 -75 6046 5816 323 282 19 10 chr2 194756160 194756263 -55931591 - L1ME4a LINE L1 -384 5737 5634 524 224 68 50 chr2 194757098 194757426 -55930428 - MLT1H LTR MaLR -2 547 160 235 220 0 51 chr2 194757890 194757949 -55929905 + MER117 DNA MER1_type 1 56 -141 930 83 0 0 chr2 194758028 194758148 -55929706 + AluSg/x SINE Alu 174 293 -17 1892 149 0 4 chr2 194758161 194758442 -55929412 + AluSx SINE Alu 1 280 -32 294 29 0 0 chr2 194758446 194758481 -55929373 + (CATA)n Simple_repeat Simple_repeat 2 36 0 245 256 78 93 chr2 194758566 194758695 -55929159 - MLT1I LTR MaLR -185 224 98 189 286 0 0 chr2 194758798 194758847 -55929007 - L3 LINE CR1 -843 734 686 2324 125 22 14 chr2 194759805 194760166 -55927688 + THE1B LTR MaLR 1 364 0 902 295 179 32 chr2 194760625 194761534 -55926320 - L2 LINE L2 -371 2943 1901 181 200 40 20 chr2 194762962 194763012 -55924842 - L2 LINE L2 -8 3305 3255 2125 97 3 14 chr2 194763659 194763947 -55923907 - AluSx SINE Alu -17 295 11 1407 191 3 28 chr2 194764037 194764197 -55923657 + AluJo SINE Alu 1 152 -160 1487 165 119 6 chr2 194764197 194764524 -55923330 - THE1B LTR MaLR 0 364 1 1407 191 3 28 chr2 194764524 194764651 -55923203 + AluJo SINE Alu 152 281 -31 586 234 112 47 chr2 194765596 194765874 -55921980 - L2 LINE L2 -17 3296 3001 21 0 0 0 chr2 194766874 194766895 -55920959 + AT_rich Low_complexity Low_complexity 1 21 0 400 315 54 36 chr2 194768857 194769133 -55918721 - L2 LINE L2 -655 2659 2379 180 301 96 0 chr2 194769168 194769241 -55918613 - L2 LINE L2 -924 2390 2311 1798 141 38 95 chr2 194770374 194770743 -55917111 - MER7A DNA MER2_type 0 346 1 428 250 32 39 chr2 194770753 194770909 -55916945 + L1MC5 LINE L1 7719 7873 -88 625 289 26 39 chr2 194771291 194771523 -55916331 - MIR SINE MIR -2 260 32 2817 98 54 2 chr2 194772293 194772700 -55915154 - MSTA LTR MaLR 0 428 1 877 318 67 10 chr2 194772973 194773463 -55914391 + L1MC/D LINE L1 3667 4184 -1962 425 320 56 42 chr2 194773463 194773944 -55913910 + L1MC/D LINE L1 4539 5026 -1120 217 312 86 0 chr2 194774168 194774261 -55913593 + L2 LINE L2 3191 3291 -22 332 127 18 0 chr2 194774507 194774562 -55913292 - MER5A DNA MER1_type -124 65 10 409 236 73 16 chr2 194775866 194775989 -55911865 + MER94 DNA DNA 1 130 -4 1020 169 52 24 chr2 194776590 194776803 -55911051 - MER20 DNA MER1_type 0 219 1 40 59 0 0 chr2 194777245 194777313 -55910541 + AT_rich Low_complexity Low_complexity 1 68 0 1434 76 0 0 chr2 194777393 194777577 -55910277 - AluYa5 SINE Alu 0 311 128 22 0 0 0 chr2 194778005 194778027 -55909827 + AT_rich Low_complexity Low_complexity 1 22 0 478 298 82 50 chr2 194778604 194778946 -55908908 - L2 LINE L2 -2 3270 2918 2402 122 28 6 chr2 194780438 194780792 -55907062 + THE1B LTR MaLR 3 364 0 279 0 0 0 chr2 194781126 194781157 -55906697 + (TA)n Simple_repeat Simple_repeat 1 31 0 2194 102 20 0 chr2 194781157 194781446 -55906408 - AluSx SINE Alu -17 295 1 230 269 90 64 chr2 194782090 194782246 -55905608 + L2 LINE L2 3154 3313 0 2414 89 0 0 chr2 194782995 194783298 -55904556 + AluSx SINE Alu 1 303 -9 1502 154 69 72 chr2 194784203 194784508 -55903346 - AluJo SINE Alu -8 304 1 296 311 143 25 chr2 194786056 194786252 -55901602 + L1MC/D LINE L1 5447 5665 -2143 402 156 37 118 chr2 194787349 194787402 -55900452 - MLT1H LTR MaLR 0 549 493 2137 120 3 3 chr2 194787402 194787702 -55900152 + AluSx SINE Alu 1 300 -12 402 156 37 118 chr2 194787702 194787783 -55900071 - MLT1H LTR MaLR -56 493 426 607 281 132 4 chr2 194787821 194788056 -55899798 - MLT1H LTR MaLR -222 327 63 259 214 0 0 chr2 194788659 194788715 -55899139 + L2 LINE L2 3240 3295 -18 211 284 79 53 chr2 194788729 194788919 -55898935 - MIR SINE MIR -10 252 58 21 0 0 0 chr2 194789147 194789168 -55898686 + AT_rich Low_complexity Low_complexity 1 21 0 3048 201 25 32 chr2 194792848 194793494 -55894360 + MER82 DNA MER2_type 13 653 0 261 95 0 0 chr2 194796631 194796673 -55891181 - L2 LINE L2 0 3313 3272 25 31 0 0 chr2 194798678 194798710 -55889144 + AT_rich Low_complexity Low_complexity 1 32 0 241 316 0 13 chr2 194799630 194799706 -55888148 - MIR SINE MIR -63 145 71 21 0 0 0 chr2 194802076 194802097 -55885757 + AT_rich Low_complexity Low_complexity 1 21 0 187 192 231 0 chr2 194802130 194802182 -55885672 + L2 LINE L2 3230 3293 -20 623 277 59 59 chr2 194802668 194802906 -55884948 - MIR SINE MIR -17 245 8 333 0 0 0 chr2 194803298 194803335 -55884519 + (CA)n Simple_repeat Simple_repeat 1 37 0 210 71 0 0 chr2 194803405 194803433 -55884421 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 494 286 151 0 chr2 194803871 194804086 -55883768 - MIR SINE MIR -16 246 3 2270 108 0 13 chr2 194804139 194804454 -55883400 + AluSx SINE Alu 1 311 -1 193 238 48 32 chr2 194804504 194804567 -55883287 - L2 LINE L2 -5 3308 3245 691 220 50 87 chr2 194804607 194804825 -55883029 - MER20 DNA MER1_type -4 215 6 474 238 25 33 chr2 194808327 194808449 -55879405 - L2 LINE L2 0 3313 3193 252 0 0 0 chr2 194809547 194809575 -55878279 + (TG)n Simple_repeat Simple_repeat 1 28 0 513 115 0 0 chr2 194809575 194809653 -55878201 + (TA)n Simple_repeat Simple_repeat 1 78 0 280 217 58 29 chr2 194809854 194809923 -55877931 + MIR3 SINE MIR 110 180 -28 198 152 0 0 chr2 194810319 194810352 -55877502 - L2 LINE L2 -5 3267 3235 1902 135 21 0 chr2 194814659 194814940 -55872914 + AluSx SINE Alu 1 287 -25 1892 158 0 38 chr2 194815476 194815792 -55872062 + AluJo SINE Alu 1 304 -8 10352 87 17 25 chr2 194816595 194818163 -55869691 + L1PA7 LINE L1 2015 3570 -2576 12666 81 12 1 chr2 194818272 194818868 -55868986 + L1PA7 LINE L1 3572 4160 -1994 2247 103 0 7 chr2 194818868 194819170 -55868684 + AluSx SINE Alu 1 300 -12 12666 81 12 1 chr2 194819170 194821116 -55866738 + L1PA7 LINE L1 4160 6141 -13 22 0 0 0 chr2 194821116 194821138 -55866716 + AT_rich Low_complexity Low_complexity 1 22 0 414 0 0 0 chr2 194822263 194822309 -55865545 + (CA)n Simple_repeat Simple_repeat 1 46 0 302 123 200 0 chr2 194823860 194823925 -55863929 - MER103 DNA DNA -45 121 44 835 160 0 0 chr2 194824212 194824337 -55863517 - FLAM_C SINE Alu -18 125 1 184 250 18 54 chr2 194824344 194824400 -55863454 + MER5B DNA MER1_type 125 178 0 260 264 93 50 chr2 194824749 194824889 -55862965 + L2 LINE L2 1594 1739 -1575 507 240 55 55 chr2 194825288 194825504 -55862350 + L2 LINE L2 2247 2462 -852 380 322 77 0 chr2 194825504 194825647 -55862207 + MER91A DNA MER1_type 1 154 -42 248 316 0 40 chr2 194825671 194825747 -55862107 + MER91A DNA MER1_type 123 195 -1 * 575 291 241 34 chr2 194825747 194826474 -55861380 + L2 LINE L2 2465 3313 0 1955 137 10 3 chr2 194826554 194826847 -55861007 - AluSx SINE Alu -17 295 1 320 224 21 65 chr2 194829295 194829407 -55858447 - MIR SINE MIR -91 117 10 214 218 36 18 chr2 194829540 194829595 -55858259 + GA-rich Low_complexity Low_complexity 1 56 0 1855 147 7 16 chr2 194830572 194830879 -55856975 - AluJb SINE Alu -8 304 1 293 336 0 17 chr2 194831074 194831190 -55856664 - MIR SINE MIR -138 124 11 21 0 0 0 chr2 194832110 194832131 -55855723 + AT_rich Low_complexity Low_complexity 1 21 0 710 339 66 8 chr2 194832691 194833072 -55854782 + L2 LINE L2 1940 2342 -972 260 276 55 16 chr2 194833084 194833211 -55854643 + MLT1J LTR MaLR 11 142 -369 445 303 178 49 chr2 194833536 194833880 -55853974 + L2 LINE L2 2343 2754 -560 2531 54 0 10 chr2 194833880 194834194 -55853660 + AluY SINE Alu 1 311 0 445 303 178 49 chr2 194834194 194834265 -55853589 + L2 LINE L2 2754 2813 -501 290 297 137 69 chr2 194834265 194834440 -55853414 + MER5A DNA MER1_type 2 188 -1 246 279 52 73 chr2 194834440 194834576 -55853278 + L2 LINE L2 2804 2936 -336 274 257 43 0 chr2 194835113 194835183 -55852671 + L2 LINE L2 3235 3307 -6 25 83 0 0 chr2 194836314 194836374 -55851480 + AT_rich Low_complexity Low_complexity 1 60 0 252 337 43 0 chr2 194837656 194837748 -55850106 + L3 LINE CR1 1480 1575 -2 206 265 59 0 chr2 194839885 194839953 -55847901 + (CATATA)n Simple_repeat Simple_repeat 4 75 0 22 35 0 0 chr2 194840078 194840107 -55847747 + AT_rich Low_complexity Low_complexity 1 29 0 239 0 32 0 chr2 194840936 194840967 -55846887 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 35 0 0 0 chr2 194841841 194841876 -55845978 + AT_rich Low_complexity Low_complexity 1 35 0 28 0 0 0 chr2 194842803 194842831 -55845023 + AT_rich Low_complexity Low_complexity 1 28 0 22 70 0 0 chr2 194843135 194843178 -55844676 + AT_rich Low_complexity Low_complexity 1 43 0 1591 192 31 0 chr2 194845904 194846191 -55841663 + AluJo SINE Alu 1 296 -16 346 45 0 0 chr2 194846225 194846269 -55841585 - AluY SINE Alu -223 77 34 1031 88 15 0 chr2 194846270 194846407 -55841447 + AluY SINE Alu 154 292 -19 2243 98 0 0 chr2 194846492 194846787 -55841067 + AluSx SINE Alu 1 295 -17 31 26 0 0 chr2 194846938 194846976 -55840878 + AT_rich Low_complexity Low_complexity 1 38 0 704 128 0 9 chr2 194847161 194847296 -55840558 + AluSg/x SINE Alu 186 312 0 720 229 126 65 chr2 194847359 194847627 -55840227 + L1MC5 LINE L1 7299 7549 -412 2295 103 3 0 chr2 194847627 194847928 -55839926 + AluSq SINE Alu 1 302 -11 720 229 126 65 chr2 194847928 194848256 -55839598 + L1MC5 LINE L1 7549 7931 -30 185 286 20 0 chr2 194849146 194849195 -55838659 - MIR SINE MIR -105 103 54 216 300 147 35 chr2 194850332 194850517 -55837337 - MIR SINE MIR -46 216 20 29 0 0 0 chr2 194851023 194851052 -55836802 + AT_rich Low_complexity Low_complexity 1 29 0 2229 107 0 0 chr2 194851336 194851627 -55836227 - AluSc SINE Alu -18 291 1 425 316 73 45 chr2 194852429 194852606 -55835248 + MIR3 SINE MIR 16 197 -11 206 349 144 48 chr2 194852882 194853404 -55834450 - L2 LINE L2 -410 2904 2333 211 319 143 43 chr2 194853640 194853850 -55834004 - L2 LINE L2 -27 3245 3015 771 172 136 0 chr2 194854043 194854212 -55833642 + MER58A DNA MER1_type 33 224 0 697 281 38 56 chr2 194854213 194854605 -55833249 + L1MC4 LINE L1 7532 7916 -126 26 50 0 0 chr2 194855562 194855602 -55832252 + AT_rich Low_complexity Low_complexity 1 40 0 7087 141 61 20 chr2 194857078 194858324 -55829530 + Tigger1 DNA MER2_type 1 1297 -1121 773 160 15 8 chr2 194858324 194858455 -55829399 - FLAM_C SINE Alu -11 132 1 7098 118 36 3 chr2 194858460 194859552 -55828302 + Tigger1 DNA MER2_type 1291 2418 0 1121 232 73 12 chr2 194860125 194860465 -55827389 - Charlie2 DNA MER1_type -647 2215 1855 584 273 180 22 chr2 194860472 194860750 -55827104 - Charlie2 DNA MER1_type -2460 322 1 1922 62 94 36 chr2 194860962 194861238 -55826616 + AluY SINE Alu 1 292 -19 1523 191 32 0 chr2 194862181 194862464 -55825390 + AluJo SINE Alu 12 303 -9 290 289 211 26 chr2 194863538 194863694 -55824160 + MIR3 SINE MIR 2 186 -22 21 0 0 0 chr2 194863894 194863915 -55823939 + AT_rich Low_complexity Low_complexity 1 21 0 196 296 37 0 chr2 194864800 194864854 -55823000 + MIR SINE MIR 152 207 -55 46 19 0 0 chr2 194865149 194865202 -55822652 + AT_rich Low_complexity Low_complexity 1 53 0 1743 159 14 7 chr2 194866212 194866502 -55821352 - AluJo SINE Alu -20 292 1 1468 132 86 26 chr2 194866762 194867065 -55820789 + L1MA8 LINE L1 5970 6290 -1 200 184 0 0 chr2 194867183 194867221 -55820633 + (TTTAG)n Simple_repeat Simple_repeat 2 39 0 21 36 0 0 chr2 194867638 194867666 -55820188 + AT_rich Low_complexity Low_complexity 1 28 0 2291 55 6 51 chr2 194868707 194869018 -55818836 + AluSp SINE Alu 2 298 -15 2305 65 17 0 chr2 194869039 194869330 -55818524 + AluY SINE Alu 2 297 -14 34 0 0 0 chr2 194869407 194869441 -55818413 + AT_rich Low_complexity Low_complexity 1 34 0 372 225 150 64 chr2 194870681 194870868 -55816986 - L1MC5 LINE L1 -49 7912 7710 2051 159 12 9 chr2 194871414 194871748 -55816106 + MER2 DNA MER2_type 1 335 -10 249 343 29 20 chr2 194872280 194872382 -55815472 + L2 LINE L2 3186 3288 -25 274 347 210 0 chr2 194872892 194873016 -55814838 + MIR3 SINE MIR 19 168 -40 629 222 8 0 chr2 194873099 194873225 -55814629 + FLAM_C SINE Alu 5 131 -2 28 29 0 0 chr2 194874074 194874109 -55813745 + AT_rich Low_complexity Low_complexity 1 35 0 1893 168 87 12 chr2 194874740 194875144 -55812710 + Tigger2a DNA MER2_type 1 434 0 23 0 0 0 chr2 194876287 194876310 -55811544 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 194876601 194876625 -55811229 + AT_rich Low_complexity Low_complexity 1 24 0 2399 56 14 0 chr2 194877334 194877622 -55810232 + AluSp SINE Alu 1 292 -21 225 250 26 53 chr2 194877886 194877962 -55809892 + MIR SINE MIR 80 153 -109 1733 117 16 8 chr2 194878972 194879228 -55808626 + AluSx SINE Alu 36 293 -19 24 77 0 0 chr2 194880956 194881008 -55806846 + AT_rich Low_complexity Low_complexity 1 52 0 878 209 27 36 chr2 194881598 194881818 -55806036 + MIR SINE MIR 45 262 0 1001 151 91 6 chr2 194881858 194882109 -55805745 - MER2 DNA MER2_type -28 317 4 2072 114 3 0 chr2 194882377 194882667 -55805187 + AluSx SINE Alu 1 291 -21 473 231 26 8 chr2 194882687 194882804 -55805050 - MIR SINE MIR 0 262 144 183 259 12 86 chr2 194882791 194882872 -55804982 + L2 LINE L2 3237 3311 -2 * 357 223 107 29 chr2 194882871 194882974 -55804880 - MIR SINE MIR -106 156 46 240 354 87 44 chr2 194884153 194884359 -55803495 - L2 LINE L2 -112 3160 2946 1001 181 0 0 chr2 194885917 194886077 -55801777 + FRAM SINE Alu 4 163 -13 32 0 0 0 chr2 194886079 194886111 -55801743 + AT_rich Low_complexity Low_complexity 1 32 0 184 306 0 55 chr2 194886126 194886235 -55801619 - MIR SINE MIR -110 98 9 369 237 104 40 chr2 194886755 194886928 -55800926 + L3 LINE CR1 1319 1502 -75 250 286 61 20 chr2 194887058 194887156 -55800698 + MIR3 SINE MIR 82 183 -25 490 89 0 13 chr2 194887299 194887378 -55800476 + L1MB3 LINE L1 6099 6176 -7 664 260 52 0 chr2 194887596 194887769 -55800085 + MER58A DNA MER1_type 43 224 0 562 286 169 10 chr2 194888241 194888643 -55799211 - L1ME4a LINE L1 -104 6017 5552 2349 86 0 3 chr2 194889324 194889628 -55798226 - AluSx SINE Alu -9 303 1 2014 136 3 3 chr2 194890091 194890399 -55797455 + AluSg SINE Alu 1 308 -2 2235 86 7 0 chr2 194890774 194891064 -55796790 + AluSx SINE Alu 3 294 -18 25 31 0 0 chr2 194891195 194891227 -55796627 + AT_rich Low_complexity Low_complexity 1 32 0 273 221 208 34 chr2 194891316 194891465 -55796389 - L1MC/D LINE L1 -733 5600 5426 182 379 0 0 chr2 194892685 194892743 -55795111 - L2 LINE L2 -2 3311 3254 302 294 82 98 chr2 194894696 194895206 -55792648 + L1M2 LINE L1 526 1027 -5822 432 0 0 0 chr2 194895342 194895390 -55792464 + (CTG)n Simple_repeat Simple_repeat 3 50 0 26 0 0 0 chr2 194896149 194896175 -55791679 + AT_rich Low_complexity Low_complexity 1 26 0 1125 155 139 0 chr2 194896548 194896799 -55791055 - AluJb SINE Alu -16 286 1 189 286 71 14 chr2 194896912 194896982 -55790872 + MIR SINE MIR 56 129 -133 22 0 0 0 chr2 194897046 194897068 -55790786 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr2 194897681 194897716 -55790138 + AT_rich Low_complexity Low_complexity 1 35 0 2065 110 0 3 chr2 194898136 194898449 -55789405 + AluSc SINE Alu 1 312 0 417 206 34 103 chr2 194898763 194898791 -55789063 + MIR SINE MIR 125 153 -109 2230 84 0 14 chr2 194898791 194899088 -55788766 + AluSx SINE Alu 1 293 -19 417 206 34 103 chr2 194899088 194899205 -55788649 + MIR SINE MIR 153 260 -2 389 271 127 36 chr2 194900290 194900456 -55787398 + MLT1I LTR MaLR 229 409 0 2380 95 0 0 chr2 194901241 194901547 -55786307 - AluSc SINE Alu -3 306 1 260 275 12 12 chr2 194901570 194901650 -55786204 + L1M3 LINE L1 5729 5808 -360 2276 104 0 0 chr2 194901753 194902052 -55785802 - AluSg SINE Alu -11 299 1 2111 111 17 0 chr2 194902255 194902552 -55785302 - AluSq SINE Alu -10 303 2 2125 116 0 3 chr2 194902663 194902956 -55784898 + AluSg SINE Alu 1 292 -18 2193 122 73 14 chr2 194903354 194903698 -55784156 + THE1B LTR MaLR 1 364 0 1082 144 6 0 chr2 194903902 194904062 -55783792 + AluSx SINE Alu 1 161 -151 838 86 35 17 chr2 194904180 194904296 -55783558 + AluSg/x SINE Alu 180 297 -13 1699 199 44 18 chr2 194904296 194904637 -55783217 + MSTD LTR MaLR 45 394 -2 6819 223 36 39 chr2 194904643 194904834 -55783020 + MSTA-int LTR MaLR 4 194 -1541 2115 132 134 8 chr2 194904834 194905214 -55782640 + MSTA LTR MaLR 1 428 0 6819 223 36 39 chr2 194905214 194905545 -55782309 + MSTA-int LTR MaLR 194 524 -1211 5100 117 49 38 chr2 194905545 194905714 -55782140 + MER4D LTR ERV1 1 167 -736 2178 121 0 10 chr2 194905714 194906019 -55781835 + AluSc SINE Alu 1 302 -7 5100 117 49 38 chr2 194906019 194906742 -55781112 + MER4D LTR ERV1 167 903 0 6819 223 36 39 chr2 194906742 194907955 -55779899 + MSTA-int LTR MaLR 524 1735 0 1923 164 58 21 chr2 194907955 194908333 -55779521 + MSTD LTR MaLR 1 392 -4 475 250 84 74 chr2 194908370 194908654 -55779200 - MER102a DNA MER1_type -13 317 31 344 336 28 32 chr2 194908789 194909006 -55778848 + MLT1L LTR MaLR 357 572 -43 2274 104 3 3 chr2 194909288 194909596 -55778258 + AluSg SINE Alu 1 308 -2 845 200 48 12 chr2 194909671 194909836 -55778018 + AluJo SINE Alu 118 288 -24 259 98 59 0 chr2 194909837 194909888 -55777966 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 191 204 172 86 chr2 194910163 194910256 -55777598 - MIR SINE MIR -71 191 91 1787 66 151 12 chr2 194911040 194911298 -55776556 - AluSp SINE Alu -9 294 1 378 329 37 12 chr2 194911390 194911554 -55776300 + MIR3 SINE MIR 35 202 -6 417 321 67 6 chr2 194912711 194912876 -55774978 + MIR SINE MIR 82 256 -6 604 341 73 4 chr2 194912876 194913149 -55774705 + L2 LINE L2 2651 2942 -372 252 333 0 32 chr2 194913348 194913441 -55774413 + L2 LINE L2 2936 3025 -247 438 101 253 0 chr2 194913562 194913641 -55774213 - AluSc SINE Alu -12 297 199 2828 89 0 13 chr2 194913660 194914040 -55773814 - THE1C LTR MaLR 0 375 1 2210 103 0 7 chr2 194914236 194914537 -55773317 - AluSg SINE Alu -10 300 2 259 182 36 0 chr2 194914990 194915045 -55772809 - L2 LINE L2 -2 3311 3255 368 288 25 42 chr2 194916180 194916298 -55771556 - L3 LINE CR1 -4 1573 1458 347 361 95 0 chr2 194916362 194916531 -55771323 + MER5A DNA MER1_type 1 185 -4 270 303 67 59 chr2 194917428 194917547 -55770307 + MIR SINE MIR 19 138 -70 1838 138 0 21 chr2 194917636 194917953 -55769901 - AluSx SINE Alu 0 316 6 204 67 0 0 chr2 194918155 194918185 -55769669 + (TG)n Simple_repeat Simple_repeat 1 30 0 253 317 61 0 chr2 194919080 194919162 -55768692 + L2 LINE L2 3209 3295 -18 296 257 114 41 chr2 194919175 194919382 -55768472 + MIR SINE MIR 44 262 0 2431 60 0 17 chr2 194919980 194920282 -55767572 - AluY SINE Alu -14 297 1 29 0 0 0 chr2 194920507 194920536 -55767318 + AT_rich Low_complexity Low_complexity 1 29 0 268 311 198 0 chr2 194920789 194920895 -55766959 + L2 LINE L2 3127 3253 -19 220 150 0 25 chr2 194920862 194920902 -55766952 + MIR SINE MIR 217 255 -7 * 402 246 77 108 chr2 194921361 194921556 -55766298 + MER20B DNA MER1_type 1 189 -594 198 311 0 16 chr2 194922221 194922282 -55765572 + L2 LINE L2 3207 3266 -47 2037 118 7 0 chr2 194922747 194923065 -55764789 + AluY SINE Alu 1 320 0 425 354 26 31 chr2 194923277 194923472 -55764382 - MER91A DNA MER1_type 0 196 3 188 316 92 0 chr2 194923680 194923756 -55764098 + L2 LINE L2 3172 3254 -18 2190 120 0 0 chr2 194924537 194924836 -55763018 - AluSc SINE Alu -10 299 1 557 240 33 66 chr2 194924950 194925192 -55762662 - MER102a DNA MER1_type -12 318 85 1688 60 0 18 chr2 194925205 194925460 -55762394 + AluY SINE Alu 75 325 0 2118 111 0 0 chr2 194925808 194926126 -55761728 - AluSc SINE Alu 0 318 1 281 175 0 35 chr2 194926319 194926376 -55761478 + MIR SINE MIR 121 175 -87 2685 29 3 0 chr2 194926937 194927244 -55760610 + AluY SINE Alu 1 308 -3 405 0 0 0 chr2 194927244 194927289 -55760565 + (TA)n Simple_repeat Simple_repeat 1 45 0 346 329 55 0 chr2 194927544 194927690 -55760164 + MARNA DNA Mariner 91 244 -342 2428 67 0 7 chr2 194927834 194928133 -55759721 + AluSp SINE Alu 1 297 -16 29 28 0 0 chr2 194928140 194928176 -55759678 + AT_rich Low_complexity Low_complexity 1 36 0 204 240 299 7 chr2 194930256 194930410 -55757444 - L2 LINE L2 -1226 2088 1890 268 286 0 0 chr2 194930875 194930931 -55756923 + MER91A DNA MER1_type 140 195 -1 395 302 83 25 chr2 194931750 194932028 -55755826 - HERV16 LTR ERVL -1059 3937 3644 2229 301 62 30 chr2 194932062 194932665 -55755189 - HERV16 LTR ERVL -2113 2883 2237 2160 99 0 0 chr2 194932665 194932982 -55754872 - AluSx SINE Alu 0 318 2 2229 301 62 30 chr2 194932982 194933306 -55754548 - HERV16 LTR ERVL -2759 2237 1925 390 349 30 22 chr2 194933331 194933563 -55754291 - HERV16 LTR ERVL -4753 243 10 1087 300 60 31 chr2 194933580 194934030 -55753824 - LTR16B LTR ERVL -1 463 1 344 226 52 43 chr2 194934998 194935113 -55752741 - L2 LINE L2 -5 3308 3193 683 221 92 69 chr2 194936792 194936942 -55750912 + MLT1H LTR MaLR 1 146 -403 2875 32 6 0 chr2 194936942 194937289 -55750565 - L1PA4 LINE L1 -1 6154 5806 683 221 92 69 chr2 194937289 194937547 -55750307 + MLT1H LTR MaLR 146 464 -85 635 268 104 0 chr2 194937912 194938076 -55749778 - MER58A DNA MER1_type -43 181 1 221 313 0 15 chr2 194938434 194938501 -55749353 + CT-rich Low_complexity Low_complexity 1 66 0 189 175 0 0 chr2 194939698 194939738 -55748116 + (TA)n Simple_repeat Simple_repeat 2 41 0 532 375 51 5 chr2 194940242 194940458 -55747396 - L2 LINE L2 0 3272 3047 572 303 59 50 chr2 194940713 194941053 -55746801 - L3 LINE CR1 -37 1540 1198 464 0 18 0 chr2 194941075 194941131 -55746723 + (TCTA)n Simple_repeat Simple_repeat 3 59 0 266 191 0 0 chr2 194941310 194941357 -55746497 + MER66B LTR ERV1 298 344 -142 748 154 16 28 chr2 194941359 194941541 -55746313 + GA-rich Low_complexity Low_complexity 1 180 0 198 143 0 0 chr2 194941545 194941580 -55746274 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 199 266 31 0 chr2 194941747 194941811 -55746043 - MIR3 SINE MIR -17 191 126 3252 153 62 92 chr2 194942112 194942377 -55745477 + L1MB7 LINE L1 4903 5174 -1010 2575 47 0 0 chr2 194942377 194942674 -55745180 + AluY SINE Alu 2 298 -13 3252 153 62 92 chr2 194942674 194943720 -55744134 + L1MB7 LINE L1 5174 6179 -5 251 304 0 0 chr2 194943746 194943848 -55744006 + L1MC5 LINE L1 7341 7442 -519 23 54 0 0 chr2 194943961 194943998 -55743856 + AT_rich Low_complexity Low_complexity 1 37 0 2444 62 3 3 chr2 194944250 194944578 -55743276 - AluSc SINE Alu 0 328 1 28 79 0 0 chr2 194945237 194945300 -55742554 + AT_rich Low_complexity Low_complexity 1 63 0 1453 201 70 100 chr2 194945402 194946003 -55741851 + L1MA9 LINE L1 5692 6274 -38 1892 95 53 0 chr2 194946015 194946277 -55741577 + AluSq SINE Alu 20 295 -18 2241 133 83 12 chr2 194946299 194946698 -55741156 + MSTA LTR MaLR 1 427 -1 342 226 91 106 chr2 194947366 194947706 -55740148 - L1ME LINE L1 -321 5800 5466 26 64 0 0 chr2 194947717 194947764 -55740090 + AT_rich Low_complexity Low_complexity 1 47 0 188 86 29 0 chr2 194947803 194947838 -55740016 + (TA)n Simple_repeat Simple_repeat 1 36 0 434 186 35 12 chr2 194948363 194948449 -55739405 - MER5B DNA MER1_type -1 177 90 1050 209 112 53 chr2 194948458 194948779 -55739075 + MER2 DNA MER2_type 6 345 0 327 151 164 0 chr2 194948779 194948852 -55739002 - MER5B DNA MER1_type -91 87 3 1340 228 34 18 chr2 194948996 194949382 -55738472 + L1M4 LINE L1 1339 1730 -4654 1396 263 82 24 chr2 194949462 194949925 -55737929 + L1M4 LINE L1 3954 4454 -1928 2452 78 0 0 chr2 194949925 194950220 -55737634 - AluY SINE Alu -16 295 1 1396 263 82 24 chr2 194950220 194950296 -55737558 + L1M4 LINE L1 4454 4524 -1858 2170 261 47 49 chr2 194950322 194951060 -55736794 - MER21B LTR ERV1 -126 737 1 3242 177 32 15 chr2 194951062 194951524 -55736330 + L1M4 LINE L1 4478 4958 -1424 2140 106 13 17 chr2 194951524 194951825 -55736029 + AluSq SINE Alu 4 303 -10 3242 177 32 15 chr2 194951825 194952086 -55735768 + L1M4 LINE L1 4958 5213 -1169 2366 74 7 10 chr2 194952259 194952555 -55735299 - AluSg SINE Alu -14 296 2 262 305 84 21 chr2 194952714 194952809 -55735045 - MER5A DNA MER1_type -26 163 63 2399 106 0 3 chr2 194952850 194953161 -55734693 + AluSg SINE Alu 1 310 0 228 294 25 10 chr2 194953845 194954014 -55733840 - MIR SINE MIR -24 238 8 2164 81 3 11 chr2 194956427 194956712 -55731142 - AluSg SINE Alu -10 300 18 1503 223 112 26 chr2 194956836 194957266 -55730588 - MLT1C LTR MaLR 0 467 1 297 0 0 0 chr2 194957274 194957307 -55730547 + (TG)n Simple_repeat Simple_repeat 2 34 0 348 193 42 42 chr2 194957662 194957781 -55730073 - L1MC4 LINE L1 0 8042 7924 3230 192 5 14 chr2 194957812 194958374 -55729480 + MER74A LTR ERVL 2 558 0 2226 218 114 7 chr2 194958425 194959247 -55728607 - L1ME1 LINE L1 -3 6163 5213 1012 176 199 4 chr2 194959931 194960192 -55727662 + AluSx SINE Alu 1 312 0 309 51 0 0 chr2 194961581 194961620 -55726234 + (TG)n Simple_repeat Simple_repeat 2 40 0 593 304 208 0 chr2 194962069 194962415 -55725439 + L3 LINE CR1 1053 1470 -107 671 285 55 23 chr2 194962735 194962991 -55724863 - LTR33 LTR ERVL -2 519 256 655 199 45 19 chr2 194963018 194963174 -55724680 - LTR33 LTR ERVL -350 171 12 270 226 48 0 chr2 194963499 194963561 -55724293 + MER69 DNA AcHobo 2 66 -2460 696 209 0 0 chr2 194963699 194963838 -55724016 + MER69 DNA AcHobo 2380 2518 -8 473 341 35 23 chr2 194964929 194965100 -55722754 - MIR SINE MIR -81 181 9 357 284 21 0 chr2 194965100 194965195 -55722659 + MER5A DNA MER1_type 1 97 -92 262 260 213 0 chr2 194965211 194965338 -55722516 - L2 LINE L2 -333 2980 2827 482 22 0 87 chr2 194965361 194965453 -55722401 + (TTTCC)n Simple_repeat Simple_repeat 1 84 0 1532 165 48 4 chr2 194965453 194965726 -55722128 - AluJo SINE Alu -1 311 27 230 310 103 0 chr2 194965732 194965819 -55722035 - L2 LINE L2 -540 2774 2679 301 270 26 66 chr2 194965918 194966070 -55721784 + MLT1J LTR MaLR 114 259 -252 245 204 0 0 chr2 194966195 194966239 -55721615 + MLT1J1 LTR MaLR 403 446 0 721 271 86 40 chr2 194966239 194966542 -55721312 - L2 LINE L2 -600 2714 2398 32 67 0 0 chr2 194967217 194967277 -55720577 + AT_rich Low_complexity Low_complexity 1 60 0 180 343 30 15 chr2 194967372 194967439 -55720415 - L2 LINE L2 -86 3186 3119 2205 98 11 0 chr2 194969066 194969352 -55718502 + AluSc SINE Alu 1 289 -20 250 254 0 16 chr2 194970058 194970121 -55717733 - L2 LINE L2 -4 3268 3207 184 246 46 15 chr2 194970456 194970521 -55717333 + MER5A DNA MER1_type 37 103 -86 649 174 24 12 chr2 194970871 194971038 -55716816 + CT-rich Low_complexity Low_complexity 4 172 0 812 176 48 30 chr2 194971066 194971231 -55716623 - FRAM SINE Alu -8 168 1 344 113 32 0 chr2 194971472 194971534 -55716320 + (TATG)n Simple_repeat Simple_repeat 3 66 0 327 298 134 47 chr2 194971588 194971759 -55716095 - MIR SINE MIR -74 188 3 202 300 87 87 chr2 194972254 194972270 -55715584 - MER5A DNA MER1_type -26 163 148 1004 206 27 0 chr2 194972270 194972454 -55715400 + MER5A DNA MER1_type 1 189 0 202 300 87 87 chr2 194972454 194972587 -55715267 - MER5A DNA MER1_type -40 149 14 1640 151 17 78 chr2 194973224 194973582 -55714272 + L1MB5 LINE L1 5833 6168 -6 291 265 147 18 chr2 194973623 194973793 -55714061 + MARNA DNA Mariner 328 519 -67 327 65 0 0 chr2 194973838 194973884 -55713970 + (CA)n Simple_repeat Simple_repeat 1 46 0 228 348 71 33 chr2 194975594 194975778 -55712076 + L3b LINE CR1 1128 1318 -265 46 19 0 0 chr2 194976198 194976251 -55711603 + AT_rich Low_complexity Low_complexity 1 53 0 251 317 100 25 chr2 194976254 194976374 -55711480 - MER5B DNA MER1_type 0 178 50 270 261 112 43 chr2 194976715 194976876 -55710978 - MIR SINE MIR -65 197 26 1502 163 51 20 chr2 194977226 194977521 -55710333 + AluJo SINE Alu 1 304 -8 189 74 0 0 chr2 194977874 194977901 -55709953 + (GGATG)n Simple_repeat Simple_repeat 1 27 0 185 0 40 0 chr2 194978478 194978503 -55709351 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 186 43 0 0 chr2 194978658 194978681 -55709173 + (CA)n Simple_repeat Simple_repeat 2 24 0 2036 91 8 0 chr2 194978695 194978958 -55708896 - AluSc SINE Alu -6 303 39 736 271 32 36 chr2 194978973 194979224 -55708630 + MIR SINE MIR 10 259 -3 2019 38 13 0 chr2 194979340 194979577 -55708277 - AluY SINE Alu -8 303 64 186 330 128 11 chr2 194979635 194979729 -55708125 + L2 LINE L2 3108 3212 -60 200 194 0 0 chr2 194980179 194980215 -55707639 + (CA)n Simple_repeat Simple_repeat 1 36 0 261 0 0 0 chr2 194980420 194980449 -55707405 + (T)n Simple_repeat Simple_repeat 1 29 0 276 303 8 49 chr2 194980528 194980650 -55707204 - L2 LINE L2 0 3313 3197 27 49 0 0 chr2 194980829 194980870 -55706984 + AT_rich Low_complexity Low_complexity 1 41 0 1624 212 87 72 chr2 194981262 194981866 -55705988 - MLT1G LTR MaLR -5 585 10 1880 194 68 3 chr2 194982139 194982505 -55705349 + MLT1B LTR MaLR 1 390 0 296 383 106 29 chr2 194982590 194982901 -55704953 + L2 LINE L2 2924 3258 -14 312 281 10 21 chr2 194982921 194983017 -55704837 - MIR3 SINE MIR -6 202 108 181 214 36 131 chr2 194983240 194983299 -55704555 + MIR3 SINE MIR 112 162 -46 2264 113 3 3 chr2 194983299 194983610 -55704244 - AluSx SINE Alu -1 311 1 181 214 36 131 chr2 194983610 194983634 -55704220 + MIR3 SINE MIR 162 187 -21 220 331 105 16 chr2 194986215 194986339 -55701515 + L3 LINE CR1 1323 1457 -120 1180 275 63 38 chr2 194986350 194986823 -55701031 - LTR16C LTR ERVL -6 485 1 2062 142 7 7 chr2 194987022 194987331 -55700523 - AluJb SINE Alu -3 309 1 294 247 43 56 chr2 194987449 194987611 -55700243 + LTR31 LTR ERV1 446 605 -14 1417 203 29 0 chr2 194988370 194988646 -55699208 + L1ME1 LINE L1 5861 6144 -22 237 178 0 0 chr2 194988646 194988691 -55699163 + (TATG)n Simple_repeat Simple_repeat 2 46 0 356 253 23 0 chr2 194988691 194988778 -55699076 + L1MC4 LINE L1 6614 6702 -1340 2304 99 0 10 chr2 194988797 194989101 -55698753 - AluSx SINE Alu -11 301 1 203 162 0 0 chr2 194989110 194989147 -55698707 + A-rich Low_complexity Low_complexity 4 40 0 200 167 0 19 chr2 194989856 194989910 -55697944 + G-rich Low_complexity Low_complexity 1 53 0 1692 186 286 42 chr2 194990747 194990945 -55696909 - MLT1E1 LTR MaLR 0 654 506 2546 64 0 6 chr2 194990945 194991257 -55696597 - AluY SINE Alu -1 310 1 1692 186 286 42 chr2 194991257 194991578 -55696276 - MLT1E1 LTR MaLR -148 506 8 230 274 0 0 chr2 194991598 194991649 -55696205 - MLT1L LTR MaLR -349 266 216 * 303 179 0 115 chr2 194991622 194991700 -55696154 - MLT1J LTR MaLR -333 178 110 220 354 0 0 chr2 194991820 194991899 -55695955 - MIR3 SINE MIR -9 199 121 217 385 0 0 chr2 194992418 194992501 -55695353 - L2 LINE L2 -671 2643 2561 253 228 63 25 chr2 194992579 194992658 -55695196 + L2 LINE L2 3187 3268 -4 241 267 69 35 chr2 194992703 194992819 -55695035 - L2 LINE L2 -905 2409 2290 2511 77 0 0 chr2 194993149 194993459 -55694395 + AluY SINE Alu 1 310 -1 215 225 0 0 chr2 194993687 194993727 -55694127 + GA-rich Low_complexity Low_complexity 1 40 0 222 258 161 21 chr2 194993745 194993838 -55694016 + MIR3 SINE MIR 67 172 -36 200 121 30 0 chr2 194994039 194994072 -55693782 + (TG)n Simple_repeat Simple_repeat 2 35 0 194 0 0 37 chr2 194994512 194994539 -55693315 + (TTA)n Simple_repeat Simple_repeat 2 27 0 341 309 69 73 chr2 194995433 194995637 -55692217 - MLT1J LTR MaLR -212 299 97 435 19 0 0 chr2 194996230 194996282 -55691572 + (CA)n Simple_repeat Simple_repeat 2 53 0 322 305 67 0 chr2 194996547 194996652 -55691202 + MIR SINE MIR 40 151 -57 227 324 0 0 chr2 194996697 194996765 -55691089 - L2 LINE L2 0 3272 3205 1323 140 25 25 chr2 194996838 194997081 -55690773 + L1MA8 LINE L1 6047 6289 -2 2685 251 110 7 chr2 194997092 194997866 -55689988 + L1MB4 LINE L1 4393 5246 -900 44052 49 2 1 chr2 194997868 195004019 -55683835 + L1PA4 LINE L1 2 6155 0 4521 171 32 35 chr2 195004033 195004910 -55682944 + L1MB4 LINE L1 5239 6113 -67 917 148 8 0 chr2 195004910 195005038 -55682816 + AluJ SINE Alu 2 130 -172 4521 171 32 35 chr2 195005038 195005104 -55682750 + L1MB4 LINE L1 6113 6178 -2 581 204 20 0 chr2 195006684 195006782 -55681072 + FLAM_A SINE Alu 18 161 0 397 0 0 0 chr2 195006782 195006826 -55681028 + (TAAA)n Simple_repeat Simple_repeat 2 172 0 985 183 6 11 chr2 195007138 195007318 -55680536 + AluJ SINE Alu 112 290 -22 2392 80 10 0 chr2 195007378 195007680 -55680174 + AluY SINE Alu 1 305 -6 407 35 18 0 chr2 195008662 195008719 -55679135 + (CA)n Simple_repeat Simple_repeat 1 58 0 279 0 0 0 chr2 195008734 195008765 -55679089 + (TG)n Simple_repeat Simple_repeat 2 32 0 284 294 110 7 chr2 195008913 195009059 -55678795 - L1ME LINE L1 -337 5784 5624 1008 205 156 52 chr2 195009350 195009665 -55678189 + MLT1J2 LTR MaLR 24 380 -70 1589 153 104 0 chr2 195009665 195009933 -55677921 - AluJb SINE Alu -16 296 1 1008 205 156 52 chr2 195009933 195009963 -55677891 + MLT1J2 LTR MaLR 380 405 -45 535 213 143 9 chr2 195010154 195010316 -55677538 + MLT1I LTR MaLR 268 409 0 820 211 29 29 chr2 195012622 195012797 -55675057 + AluJo SINE Alu 118 292 -20 25 0 0 0 chr2 195013289 195013314 -55674540 + AT_rich Low_complexity Low_complexity 1 25 0 899 190 0 6 chr2 195014221 195014384 -55673470 + FRAM SINE Alu 2 163 -13 2348 84 30 0 chr2 195014386 195014685 -55673169 + AluSx SINE Alu 1 308 -4 4312 135 83 51 chr2 195014740 195016176 -55671678 + pTR5 LTR ERV1 742 2606 0 243 61 0 0 chr2 195016665 195016698 -55671156 + (TAAAAA)n Simple_repeat Simple_repeat 4 36 0 2264 91 0 82 chr2 195016738 195017078 -55670776 - AluSx SINE Alu 0 312 1 2015 168 122 3 chr2 195017375 195017761 -55670093 - MSTB1 LTR MaLR 0 432 1 586 254 87 103 chr2 195018021 195018446 -55669408 - Charlie8 DNA MER1_type -1887 530 113 225 0 0 0 chr2 195018556 195018581 -55669273 + (TG)n Simple_repeat Simple_repeat 1 25 0 548 202 31 127 chr2 195018927 195019155 -55668699 - L2 LINE L2 0 3313 3108 1831 262 102 15 chr2 195019159 195019754 -55668100 + HERV16 LTR ERVL 2096 2742 -2254 2397 194 113 4 chr2 195019754 195020224 -55667630 + MLT1F1 LTR MaLR 1 521 -46 529 214 64 0 chr2 195021398 195021538 -55666316 + L1MDb LINE L1 1226 1374 -5035 415 183 0 0 chr2 195021619 195021690 -55666164 - L1MA9 LINE L1 -39 6273 6203 1641 165 52 30 chr2 195021725 195022094 -55665760 + L1MDb LINE L1 1409 1785 -4621 476 184 9 9 chr2 195022118 195022227 -55665627 - L1MDb LINE L1 -5247 1296 1188 527 168 50 0 chr2 195022229 195022330 -55665524 + L1MA9 LINE L1 6168 6273 -39 854 225 62 59 chr2 195022404 195022693 -55665161 - L1MDb LINE L1 -5340 1203 914 2437 214 45 12 chr2 195022701 195023188 -55664666 + MLT1D LTR MaLR 1 503 -2 1120 237 89 53 chr2 195023300 195023714 -55664140 - MLT1E3 LTR MaLR -193 431 3 575 223 21 75 chr2 195023722 195023910 -55663944 - L1MDb LINE L1 -6184 356 179 244 70 47 0 chr2 195023925 195023968 -55663886 + (TA)n Simple_repeat Simple_repeat 1 45 0 343 200 11 11 chr2 195024019 195024114 -55663740 + (TA)n Simple_repeat Simple_repeat 2 96 0 2379 80 0 7 chr2 195024142 195024441 -55663413 - AluY SINE Alu -14 297 1 12708 69 5 8 chr2 195024443 195025038 -55662816 - L1PA8 LINE L1 -272 5900 5305 2368 89 7 0 chr2 195025038 195025340 -55662514 - AluSc SINE Alu -5 304 1 12708 69 5 8 chr2 195025340 195026961 -55660893 - L1PA8 LINE L1 -867 5305 3681 492 223 21 0 chr2 195027034 195027128 -55660726 + MER21B LTR ERV1 20 115 -748 2235 189 119 30 chr2 195027154 195027725 -55660129 + MER21B LTR ERV1 185 806 -57 285 226 105 68 chr2 195027761 195027894 -55659960 - L1MDb LINE L1 -6396 144 7 285 301 0 27 chr2 195027935 195028008 -55659846 + MIR3 SINE MIR 11 81 -127 288 177 39 71 chr2 195028085 195028303 -55659551 + Charlie7 DNA MER1_type 2415 2572 -40 706 271 94 32 chr2 195029004 195029376 -55658478 + MLT1J LTR MaLR 117 511 0 1299 173 5 14 chr2 195029588 195029808 -55658046 - MLT1A1 LTR MaLR 0 365 148 1576 144 96 4 chr2 195029808 195030079 -55657775 - AluSg SINE Alu -4 306 11 1286 131 33 0 chr2 195030088 195030271 -55657583 - AluSx SINE Alu -123 189 1 931 116 20 7 chr2 195030279 195030426 -55657428 - MLT1A1 LTR MaLR -216 149 1 490 267 72 31 chr2 195030975 195031170 -55656684 + MLT1K LTR MaLR 375 577 -11 333 400 12 6 chr2 195032569 195032739 -55655115 + MIR3 SINE MIR 22 192 -16 345 238 105 9 chr2 195032970 195033075 -55654779 + L2 LINE L2 3199 3313 0 206 293 35 60 chr2 195033112 195033228 -55654626 - L2 LINE L2 -212 3060 2948 789 257 124 16 chr2 195033234 195033483 -55654371 + MLT1J LTR MaLR 1 276 -235 1495 231 107 26 chr2 195033485 195033838 -55654016 + MLT2F LTR ERVL 1 324 -339 1621 215 79 14 chr2 195033838 195034206 -55653648 - MSTD LTR MaLR -4 392 1 1495 231 107 26 chr2 195034206 195034375 -55653479 + MLT2F LTR ERVL 324 478 -185 414 0 0 0 chr2 195034375 195034421 -55653433 + (TG)n Simple_repeat Simple_repeat 2 47 0 1495 231 107 26 chr2 195034421 195034450 -55653404 + MLT2F LTR ERVL 478 654 -9 1270 243 55 7 chr2 195034454 195034906 -55652948 + MLT1K-int LTR MaLR 15 611 -760 465 299 98 6 chr2 195035148 195035312 -55652542 + MLT1K-int LTR MaLR 699 877 -494 998 226 39 14 chr2 195035427 195035635 -55652219 + MLT1E LTR MaLR 381 593 0 828 238 79 14 chr2 195035637 195035851 -55652003 + MLT1J LTR MaLR 282 509 -2 864 140 24 1 chr2 195035997 195036146 -55651708 - L1P1 LINE L1 -335 5820 5668 641 110 0 0 chr2 195036148 195036239 -55651615 - Alu SINE Alu -2 310 220 1856 193 6 0 chr2 195036239 195036561 -55651293 - L1ME LINE L1 -499 6061 5738 5844 223 42 43 chr2 195036582 195038207 -55649647 - L1ME LINE L1 -1663 4877 3254 2435 89 0 0 chr2 195038207 195038509 -55649345 + AluY SINE Alu 1 302 -9 5844 223 42 43 chr2 195038509 195038763 -55649091 - L1ME LINE L1 -3286 3254 3001 478 262 221 6 chr2 195038770 195038942 -55648912 + MER58C DNA MER1_type 4 212 -3 1352 216 34 57 chr2 195038954 195039074 -55648780 - L1MDa LINE L1 -3549 2991 2870 2327 132 3 28 chr2 195039074 195039352 -55648502 - MER7A DNA MER2_type -2692 346 79 2403 78 3 0 chr2 195039352 195039648 -55648206 + AluSp SINE Alu 1 297 -16 2327 132 3 28 chr2 195039648 195039726 -55648128 - MER7A DNA MER2_type -2959 79 1 1352 216 34 57 chr2 195039726 195040042 -55647812 - L1MDa LINE L1 -3670 2870 2558 23 33 0 0 chr2 195040427 195040457 -55647397 + AT_rich Low_complexity Low_complexity 1 30 0 397 294 56 16 chr2 195040586 195040712 -55647142 + MIR3 SINE MIR 14 144 -64 2109 146 5 85 chr2 195040843 195041221 -55646633 + MER7A DNA MER2_type 1 346 0 189 0 0 0 chr2 195041794 195041815 -55646039 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 378 113 36 47 chr2 195041906 195042004 -55645850 + LTR49 LTR ERV1 459 573 -71 491 292 67 52 chr2 195042989 195043256 -55644598 - MLT1J LTR MaLR 0 511 241 380 240 33 8 chr2 195043279 195043400 -55644454 + L1ME4a LINE L1 5984 6107 -14 1918 131 0 33 chr2 195043423 195043728 -55644126 - AluSx SINE Alu -17 295 1 1473 248 81 33 chr2 195044112 195044596 -55643258 - MLT1F1 LTR MaLR 0 567 61 1340 189 4 9 chr2 195044837 195045064 -55642790 - AluJo SINE Alu -86 226 1 1264 109 109 14 chr2 195045176 195045387 -55642467 - MSTA LTR MaLR -47 381 151 1532 174 49 113 chr2 195046279 195046669 -55641185 + MLT1A1 LTR MaLR 1 365 0 497 171 27 9 chr2 195047198 195047309 -55640545 + LTR33A LTR ERVL 394 506 -17 2435 129 113 10 chr2 195047432 195047820 -55640034 - MSTA LTR MaLR 0 428 1 314 245 82 10 chr2 195049991 195050089 -55637765 + Charlie7 DNA MER1_type 1 105 -2507 * 582 251 42 5 chr2 195050057 195050248 -55637606 + Charlie7 DNA MER1_type 2415 2612 0 2459 193 89 2 chr2 195051207 195051688 -55636166 - MER68 LTR ERV1 -30 532 10 22 35 0 0 chr2 195051921 195051950 -55635904 + AT_rich Low_complexity Low_complexity 1 29 0 1501 171 53 7 chr2 195051952 195052233 -55635621 - AluJo SINE Alu -18 294 1 226 355 36 9 chr2 195052239 195052349 -55635505 - MIR SINE MIR -122 140 28 3718 150 53 63 chr2 195053935 195054719 -55633135 - MER21A LTR ERV1 -17 914 187 1067 70 0 0 chr2 195054767 195054895 -55632959 + AluSg SINE Alu 1 128 -182 480 161 119 34 chr2 195054904 195055022 -55632832 - MER21A LTR ERV1 -796 135 8 207 0 0 0 chr2 195055023 195055046 -55632808 + (CA)n Simple_repeat Simple_repeat 2 24 0 1961 126 18 7 chr2 195056069 195056355 -55631499 + AluSx SINE Alu 12 300 -12 279 304 275 0 chr2 195056516 195056654 -55631200 + MIR SINE MIR 65 240 -22 208 233 33 50 chr2 195056623 195056683 -55631171 + L2 LINE L2 3214 3272 0 * 1642 132 3 75 chr2 195057632 195058002 -55629852 - MER4A LTR ERV1 0 664 263 445 156 89 0 chr2 195058004 195058094 -55629760 - MER4A LTR ERV1 -566 98 1 2770 13 0 0 chr2 195058998 195059304 -55628550 + AluYa5 SINE Alu 1 306 -5 306 335 118 6 chr2 195059337 195059498 -55628356 - MIR SINE MIR -36 226 48 345 261 43 26 chr2 195059543 195059658 -55628196 - L3 LINE CR1 -192 1385 1269 309 200 140 20 chr2 195059733 195059833 -55628021 - L3 LINE CR1 -310 1267 1156 393 217 52 35 chr2 195060218 195060333 -55627521 - MER5B DNA MER1_type -45 133 17 1780 129 41 11 chr2 195060716 195060987 -55626867 + AluSx SINE Alu 1 279 -33 339 309 24 0 chr2 195061047 195061173 -55626681 - MER117 DNA MER1_type -32 165 37 197 340 113 13 chr2 195063340 195063490 -55624364 + L2 LINE L2 2889 3053 -219 1823 159 0 34 chr2 195063866 195064187 -55623667 + AluJo SINE Alu 3 312 0 2188 96 0 0 chr2 195065374 195065682 -55622172 + AluSx SINE Alu 1 308 0 297 0 0 0 chr2 195066063 195066096 -55621758 + (TG)n Simple_repeat Simple_repeat 1 33 0 1497 209 48 7 chr2 195066800 195067073 -55620781 - AluJo SINE Alu -28 284 1 2277 112 25 30 chr2 195067353 195067719 -55620135 + THE1B LTR MaLR 1 364 0 2150 140 22 66 chr2 195068281 195068689 -55619165 - MLT1B LTR MaLR 0 390 1 2018 158 85 24 chr2 195069459 195069920 -55617934 - MER34 LTR ERV1 -27 515 27 223 270 99 45 chr2 195069957 195070068 -55617786 - MIR3 SINE MIR -7 201 85 2111 130 0 10 chr2 195070176 195070477 -55617377 + AluJb SINE Alu 1 298 -14 2097 113 31 0 chr2 195071404 195071695 -55616159 + AluSx SINE Alu 1 300 -12 1760 173 0 7 chr2 195072009 195072316 -55615538 + AluJb SINE Alu 1 305 -7 22 0 0 0 chr2 195072439 195072461 -55615393 + AT_rich Low_complexity Low_complexity 1 22 0 2027 120 32 3 chr2 195073717 195074000 -55613854 + AluSx SINE Alu 1 291 -21 208 318 108 23 chr2 195074481 195074610 -55613244 - MIR3 SINE MIR -52 156 17 364 281 24 38 chr2 195074894 195075047 -55612807 - MIR3 SINE MIR -39 169 30 263 247 137 34 chr2 195075278 195075424 -55612430 + MIR3 SINE MIR 6 166 -42 499 343 63 40 chr2 195076732 195077161 -55610693 + L2 LINE L2 1938 2376 -938 1232 171 143 20 chr2 195077498 195077784 -55610070 + AluJo SINE Alu 1 317 0 208 308 77 0 chr2 195078057 195078148 -55609706 + MIR SINE MIR 98 195 -67 275 203 0 72 chr2 195078362 195078431 -55609423 + L2 LINE L2 3209 3272 0 992 200 0 0 chr2 195078603 195078778 -55609076 + AluJb SINE Alu 129 303 -9 280 246 246 0 chr2 195079261 195079383 -55608471 + MIR SINE MIR 75 226 -36 27 0 0 0 chr2 195079586 195079613 -55608241 + AT_rich Low_complexity Low_complexity 1 27 0 265 222 0 0 chr2 195080930 195080993 -55606861 + L1MA9 LINE L1 6201 6263 -49 21 36 0 0 chr2 195081005 195081033 -55606821 + AT_rich Low_complexity Low_complexity 1 28 0 1922 72 0 34 chr2 195081622 195081887 -55605967 - AluY SINE Alu -19 292 37 228 35 0 0 chr2 195082697 195082726 -55605128 + (CAA)n Simple_repeat Simple_repeat 2 30 0 244 188 43 101 chr2 195082978 195083047 -55604807 + L2 LINE L2 3170 3234 -38 21 0 0 0 chr2 195083748 195083769 -55604085 + AT_rich Low_complexity Low_complexity 1 21 0 368 245 139 25 chr2 195086169 195086387 -55601467 + MIR SINE MIR 10 218 -44 22 0 0 0 chr2 195086390 195086412 -55601442 + AT_rich Low_complexity Low_complexity 1 22 0 200 200 0 22 chr2 195086723 195086768 -55601086 + (CA)n Simple_repeat Simple_repeat 2 45 0 516 328 73 10 chr2 195086885 195087089 -55600765 - MIR SINE MIR 0 262 46 2106 101 44 0 chr2 195087144 195087521 -55600333 + AluY SINE Alu 1 390 0 231 333 102 9 chr2 195088038 195088146 -55599708 + MIR3 SINE MIR 67 184 -24 969 186 109 5 chr2 195088618 195088828 -55599026 - MER46A DNA MER2_type -4 232 1 216 0 0 0 chr2 195088850 195088874 -55598980 + (T)n Simple_repeat Simple_repeat 1 24 0 552 228 114 27 chr2 195089904 195090088 -55597766 + L2 LINE L2 3114 3313 0 1886 103 0 128 chr2 195092824 195093175 -55594679 + AluSx SINE Alu 1 306 -6 232 305 77 21 chr2 195093210 195093443 -55594411 - L1ME LINE L1 -351 5770 5525 612 247 84 32 chr2 195093859 195094049 -55593805 + MIR SINE MIR 50 249 -13 859 264 44 13 chr2 195095197 195095424 -55592430 + MIR SINE MIR 26 259 -3 543 356 81 32 chr2 195095639 195096174 -55591680 - L2 LINE L2 -1 3271 2618 206 335 94 39 chr2 195096218 195096421 -55591433 - L2 LINE L2 -877 2437 2224 268 296 26 59 chr2 195096541 195096693 -55591161 + MIR SINE MIR 76 222 -40 342 312 80 20 chr2 195098450 195098649 -55589205 + MIR SINE MIR 30 240 -22 1369 159 183 0 chr2 195099571 195099823 -55588031 - AluJo SINE Alu -4 298 1 222 313 28 85 chr2 195099948 195100159 -55587695 + L2 LINE L2 2866 3064 -208 839 143 0 38 chr2 195101368 195101501 -55586353 - FLAM_C SINE Alu -15 128 1 874 283 155 24 chr2 195101621 195102173 -55585681 - L2 LINE L2 -5 3308 2684 832 132 0 44 chr2 195102768 195102904 -55584950 + FLAM_C SINE Alu 1 130 -3 879 138 0 15 chr2 195103446 195103576 -55584278 - FLAM_C SINE Alu -5 128 1 260 258 41 52 chr2 195103733 195103830 -55584024 + L1MC4a LINE L1 5584 5679 -2129 454 216 101 14 chr2 195103834 195103973 -55583881 - MER104 DNA Tc2 -24 156 6 434 241 90 8 chr2 195103978 195104111 -55583743 + L1MC4a LINE L1 5682 5825 -1983 2521 82 0 0 chr2 195104201 195104505 -55583349 + AluSc SINE Alu 6 309 0 421 295 6 36 chr2 195104507 195104673 -55583181 + HAL1 LINE L1 2341 2501 -6 474 289 19 13 chr2 195104946 195105105 -55582749 - MER5A DNA MER1_type -3 186 27 216 239 70 42 chr2 195106454 195106525 -55581329 + MIR3 SINE MIR 135 207 -1 2822 166 63 15 chr2 195106968 195107493 -55580361 + MER44D DNA MER2_type 1 605 0 505 301 53 32 chr2 195107830 195108265 -55579589 - L1ME4a LINE L1 -295 5826 5383 2031 102 56 7 chr2 195109561 195109845 -55578009 - AluSx SINE Alu -14 298 1 331 303 58 26 chr2 195110062 195110217 -55577637 + L1MEd LINE L1 88 247 -5958 352 319 132 36 chr2 195110315 195110791 -55577063 + L1MEd LINE L1 354 875 -5330 1422 54 0 0 chr2 195110932 195111099 -55576755 - AluY SINE Alu -15 296 130 226 319 78 14 chr2 195111172 195111313 -55576541 + L1MEd LINE L1 1625 1774 -4622 234 275 58 35 chr2 195111357 195111528 -55576326 + L1MEd LINE L1 2190 2364 -3851 841 153 15 0 chr2 195111538 195111669 -55576185 + AluJ SINE Alu 1 133 -169 435 119 0 0 chr2 195111681 195111748 -55576106 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 1001 186 12 0 chr2 195111748 195111920 -55575934 + AluJ SINE Alu 122 295 -17 308 339 0 8 chr2 195111925 195112043 -55575811 + L1MEd LINE L1 2358 2474 -3741 735 267 168 22 chr2 195112048 195112674 -55575180 + L1MEd LINE L1 2579 3355 -2860 1198 207 5 0 chr2 195112674 195112896 -55574958 - MER58A DNA MER1_type 0 224 2 735 267 168 22 chr2 195112896 195113089 -55574765 + L1MEd LINE L1 3355 3518 -2697 22 56 0 0 chr2 195113936 195113972 -55573882 + AT_rich Low_complexity Low_complexity 1 36 0 1473 174 56 17 chr2 195115039 195115326 -55572528 + AluJb SINE Alu 1 298 -14 243 338 38 60 chr2 195115358 195115491 -55572363 - L2 LINE L2 -27 3245 3116 21 0 0 0 chr2 195115951 195115972 -55571882 + AT_rich Low_complexity Low_complexity 1 21 0 456 226 89 24 chr2 195117489 195117613 -55570241 - MIR SINE MIR -12 250 119 198 200 0 22 chr2 195118748 195118793 -55569061 - MER5B DNA MER1_type -28 150 107 313 320 52 29 chr2 195120770 195120942 -55566912 + L2 LINE L2 2083 2258 -1056 189 243 138 134 chr2 195121213 195121460 -55566394 + L2 LINE L2 2249 2496 -818 184 295 66 82 chr2 195122076 195122198 -55565656 + L2 LINE L2 3148 3267 -5 663 84 39 3 chr2 195123192 195123366 -55564488 + MER30B DNA MER1_type 1 230 0 22 0 0 0 chr2 195123724 195123746 -55564108 + AT_rich Low_complexity Low_complexity 1 22 0 473 183 0 0 chr2 195124624 195124706 -55563148 + FLAM_A SINE Alu 36 117 -25 423 288 102 122 chr2 195126547 195127481 -55560373 + L1M2 LINE L1 472 1386 -5463 198 0 0 0 chr2 195127731 195127753 -55560101 + (A)n Simple_repeat Simple_repeat 1 22 0 2226 87 3 0 chr2 195128269 195128568 -55559286 + AluSq SINE Alu 14 313 0 277 351 27 9 chr2 195130215 195130326 -55557528 - L2 LINE L2 0 3272 3160 501 218 82 0 chr2 195130575 195130685 -55557169 + L2 LINE L2 3194 3312 -1 23 0 0 0 chr2 195130906 195130929 -55556925 + AT_rich Low_complexity Low_complexity 1 23 0 2337 107 8 8 chr2 195131360 195131715 -55556139 - L1PA14 LINE L1 -1 6160 5806 1177 187 74 46 chr2 195131927 195132317 -55555537 - MER113 DNA MER1_type? -43 478 78 1578 146 8 8 chr2 195132322 195132562 -55555292 - AluJb SINE Alu -9 303 64 653 280 103 22 chr2 195132603 195132835 -55555019 - MIR SINE MIR 0 262 12 198 0 0 0 chr2 195133224 195133246 -55554608 + (A)n Simple_repeat Simple_repeat 1 22 0 186 280 0 40 chr2 195134131 195134181 -55553673 - L3 LINE CR1 -7 1570 1523 * 224 240 60 0 chr2 195134155 195134205 -55553649 - MIR3 SINE MIR -33 175 123 405 0 0 0 chr2 195135437 195135482 -55552372 + (A)n Simple_repeat Simple_repeat 1 45 0 307 282 118 59 chr2 195135880 195136050 -55551804 + L1ME4a LINE L1 5489 5668 -2140 22 35 0 0 chr2 195136113 195136142 -55551712 + AT_rich Low_complexity Low_complexity 1 29 0 559 169 20 27 chr2 195136217 195136322 -55551532 + L1ME4a LINE L1 5975 6080 -41 2274 116 0 0 chr2 195136322 195136633 -55551221 + AluY SINE Alu 1 311 0 559 169 20 27 chr2 195136633 195136675 -55551179 + L1ME4a LINE L1 6080 6121 0 283 271 56 51 chr2 195138898 195139112 -55548742 + L1ME3 LINE L1 5942 6156 -6 368 284 12 59 chr2 195139131 195139300 -55548554 - MER5A DNA MER1_type -28 161 1 787 264 71 30 chr2 195140051 195140125 -55547729 + L1ME3A LINE L1 5450 5519 -651 1658 178 7 0 chr2 195140125 195140395 -55547459 + AluJo SINE Alu 21 292 -20 787 264 71 30 chr2 195140395 195140753 -55547101 + L1ME3A LINE L1 5519 5875 -295 1641 164 14 20 chr2 195140754 195141046 -55546808 + AluJo SINE Alu 1 290 -22 313 206 110 0 chr2 195142054 195142127 -55545727 + L1MC5 LINE L1 7849 7929 -32 1643 208 0 10 chr2 195142183 195142481 -55545373 - AluJo SINE Alu -17 295 1 213 282 59 136 chr2 195142574 195142656 -55545198 - L2 LINE L2 -9 3263 3176 2461 91 0 0 chr2 195142656 195142964 -55544890 + AluSq SINE Alu 1 308 -5 213 282 59 136 chr2 195142964 195143353 -55544501 - L2 LINE L2 -96 3176 2828 249 128 244 12 chr2 195143365 195143451 -55544403 + L1ME4a LINE L1 5997 6102 -19 2045 160 0 3 chr2 195144184 195144496 -55543358 - AluJb SINE Alu -1 311 1 837 157 0 15 chr2 195145255 195145389 -55542465 - FLAM_C SINE Alu -1 132 1 7665 115 28 25 chr2 195145460 195145777 -55542077 - HSMAR2 DNA Mariner -9 1293 978 1946 93 58 0 chr2 195145777 195146036 -55541818 + AluSg SINE Alu 24 297 -13 7665 115 28 25 chr2 195146036 195147007 -55540847 - HSMAR2 DNA Mariner -324 978 1 197 347 99 33 chr2 195147024 195147145 -55540709 + L2 LINE L2 3136 3264 -8 404 263 20 0 chr2 195149028 195149127 -55538727 - L2 LINE L2 0 3272 3172 240 35 0 0 chr2 195149787 195149816 -55538038 + (TC)n Simple_repeat Simple_repeat 1 29 0 22 35 0 0 chr2 195149899 195149928 -55537926 + AT_rich Low_complexity Low_complexity 1 29 0 2010 151 34 11 chr2 195149983 195150340 -55537514 + MLT1A1 LTR MaLR 1 365 0 3846 159 75 0 chr2 195150676 195151435 -55536419 - L1MB7 LINE L1 0 6184 5369 * 5907 143 33 33 chr2 195151429 195152147 -55535707 - L1MA4 LINE L1 -271 6029 5313 715 192 8 0 chr2 195152147 195152267 -55535587 - FLAM_A SINE Alu -12 121 1 5907 143 33 33 chr2 195152267 195153463 -55534391 - L1MA4 LINE L1 -987 5313 4106 3583 211 123 34 chr2 195153460 195153834 -55534020 - L1MB7 LINE L1 -810 5336 4997 * 1486 178 6 67 chr2 195153834 195154149 -55533705 - AluJo SINE Alu -16 296 1 1920 126 49 0 chr2 195154158 195154443 -55533411 - AluSx SINE Alu -13 299 1 3583 211 123 34 chr2 195154443 195154793 -55533061 - L1MB7 LINE L1 -1156 4990 4673 2073 151 0 31 chr2 195154793 195155151 -55532703 + MER7A DNA MER2_type 1 345 -1 3583 211 123 34 chr2 195155151 195155667 -55532187 - L1MB7 LINE L1 -1473 4673 3973 217 0 29 29 chr2 195155809 195155843 -55532011 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1602 166 51 14 chr2 195156744 195157039 -55530815 - AluJo SINE Alu -6 306 1 823 173 15 0 chr2 195157039 195157172 -55530682 - AluJo SINE Alu -177 135 1 1761 169 14 7 chr2 195157393 195157688 -55530166 + AluJo SINE Alu 1 297 -15 1489 187 0 54 chr2 195159128 195159443 -55528411 - AluJb SINE Alu -14 298 1 3011 211 50 57 chr2 195160424 195161271 -55526583 + MER21B LTR ERV1 12 852 -11 5180 64 1 41 chr2 195161369 195162120 -55525734 + PABL_A-int LTR ERV1 179 899 -4116 * 22196 70 48 50 chr2 195162112 195162380 -55525474 + PABL_A-int LTR ERV1 1151 1418 -3597 2211 91 7 14 chr2 195162380 195162677 -55525177 + AluSx SINE Alu 1 295 -17 22196 70 48 50 chr2 195162677 195163816 -55524038 + PABL_A-int LTR ERV1 1418 2558 -2457 2467 83 0 0 chr2 195163816 195164117 -55523737 + AluSg SINE Alu 1 301 -9 22196 70 48 50 chr2 195164117 195166580 -55521274 + PABL_A-int LTR ERV1 2558 5015 0 4965 68 12 11 chr2 195166580 195167239 -55520615 + PABL_A LTR ERV1 1 660 0 1022 169 77 20 chr2 195167270 195167518 -55520336 - Tigger7 DNA MER2_type 0 2491 2230 4615 150 35 16 chr2 195167519 195168341 -55519513 - Tigger7 DNA MER2_type -1649 838 1 272 208 0 0 chr2 195168341 195168388 -55519466 + LTR16A LTR ERVL 399 445 -5 676 123 16 8 chr2 195168498 195168620 -55519234 + L1MB3 LINE L1 6058 6180 -3 577 248 75 6 chr2 195168757 195168918 -55518936 - MER5B DNA MER1_type -6 172 1 473 249 62 57 chr2 195169468 195169536 -55518318 - MIR SINE MIR -10 252 186 2273 99 7 0 chr2 195169536 195169840 -55518014 - AluSx SINE Alu -6 306 1 473 249 62 57 chr2 195169840 195169964 -55517890 - MIR SINE MIR -76 186 59 340 313 81 104 chr2 195170241 195170594 -55517260 - L2 LINE L2 -4 3268 2926 2057 105 3 27 chr2 195170594 195170928 -55516926 + AluSx SINE Alu 1 312 0 340 313 81 104 chr2 195170928 195171018 -55516836 - L2 LINE L2 -346 2926 2835 219 333 118 13 chr2 195171222 195171375 -55516479 - L2 LINE L2 -770 2544 2376 298 291 133 26 chr2 195171571 195171722 -55516132 + MIR SINE MIR 9 175 -87 24 32 0 0 chr2 195173095 195173126 -55514728 + AT_rich Low_complexity Low_complexity 1 31 0 239 250 0 0 chr2 195173530 195173586 -55514268 + MLT1K LTR MaLR 169 224 -364 2035 152 75 5 chr2 195173695 195174084 -55513770 + MLT2C2 LTR ERVL 1 416 -48 290 119 0 0 chr2 195174143 195174197 -55513657 + MLT2B2 LTR ERVL 475 515 0 220 287 102 46 chr2 195174385 195174493 -55513361 + L2 LINE L2 3149 3262 -10 2055 179 86 5 chr2 195174841 195175272 -55512582 - MLT1C LTR MaLR -1 466 1 1998 145 38 74 chr2 195175428 195175876 -55511978 - MSTB1 LTR MaLR 0 432 1 26 30 0 0 chr2 195176677 195176710 -55511144 + AT_rich Low_complexity Low_complexity 1 33 0 969 141 12 137 chr2 195178041 195178290 -55509564 + MER20 DNA MER1_type 1 218 -1 1594 166 20 20 chr2 195178993 195179289 -55508565 - AluJo SINE Alu -16 296 1 7033 56 11 2 chr2 195179866 195181158 -55506696 - L1PA7 LINE L1 -8 6146 4850 943 160 51 0 chr2 195181534 195181690 -55506164 + FRAM SINE Alu 1 160 -16 577 327 52 90 chr2 195181700 195182405 -55505449 - L2 LINE L2 -13 3300 2618 265 259 71 12 chr2 195182576 195182661 -55505193 + MLT1J LTR MaLR 2 91 -420 241 222 67 33 chr2 195183656 195183746 -55504108 + MIR SINE MIR 129 221 -41 299 265 215 48 chr2 195183937 195184151 -55503703 - MIR SINE MIR -9 253 5 332 317 87 19 chr2 195184291 195184452 -55503402 + L2 LINE L2 3134 3305 -8 192 77 0 0 chr2 195184772 195184798 -55503056 + (CA)n Simple_repeat Simple_repeat 1 26 0 662 119 26 106 chr2 195185354 195185505 -55502349 - LTR40b LTR ERVL -1 461 323 6976 235 42 16 chr2 195185505 195187279 -55500575 - HERVL40 LTR ERVL -1298 4232 2413 448 189 0 57 chr2 195237287 195237371 -55450483 - MIR SINE MIR -71 191 113 2524 174 81 25 chr2 195237371 195237900 -55449954 - MER89 LTR ERV1 0 559 1 448 189 0 57 chr2 195237900 195237921 -55449933 - MIR SINE MIR -149 113 92 772 276 26 4 chr2 195238406 195238634 -55449220 + MLT1L LTR MaLR 383 615 0 882 218 52 28 chr2 195238708 195238956 -55448898 + MIR SINE MIR 9 262 0 21 0 0 0 chr2 195238996 195239017 -55448837 + AT_rich Low_complexity Low_complexity 1 21 0 2370 96 0 0 chr2 195239293 195239594 -55448260 - AluY SINE Alu 0 311 11 1066 244 26 68 chr2 195239872 195240017 -55447837 - MLT1I LTR MaLR 0 409 259 686 234 176 0 chr2 195240017 195240205 -55447649 - MER58A DNA MER1_type -1 223 3 1066 244 26 68 chr2 195240205 195240486 -55447368 - MLT1I LTR MaLR -150 259 1 477 50 0 0 chr2 195240926 195240986 -55446868 + (TG)n Simple_repeat Simple_repeat 2 61 0 207 186 0 0 chr2 195241213 195241256 -55446598 + CT-rich Low_complexity Low_complexity 2 44 0 302 287 54 139 chr2 195241260 195241518 -55446336 - L2 LINE L2 0 3272 3037 584 278 72 59 chr2 195242597 195243058 -55444796 - MLT1J LTR MaLR -44 467 1 2599 55 0 3 chr2 195243096 195243408 -55444446 + AluY SINE Alu 1 311 0 397 196 21 0 chr2 195244718 195244825 -55443029 + L1MA4A LINE L1 6185 6293 -7 1629 195 19 29 chr2 195245102 195245477 -55442377 - MLT1A2 LTR MaLR 0 374 4 2129 114 71 31 chr2 195246099 195246449 -55441405 + THE1B LTR MaLR 1 364 0 301 321 83 0 chr2 195246629 195246738 -55441116 + MER91C DNA MER1_type 23 140 0 1107 138 21 16 chr2 195247226 195247414 -55440440 + MER5A DNA MER1_type 1 189 0 703 174 142 0 chr2 195247429 195247584 -55440270 + MER5B DNA MER1_type 2 178 0 455 369 50 6 chr2 195247593 195247772 -55440082 - MER5A DNA MER1_type 0 189 3 596 261 134 55 chr2 195248127 195248143 -55439711 + MIR SINE MIR 6 19 -243 2090 142 0 7 chr2 195248143 195248453 -55439401 + AluSx SINE Alu 5 312 0 596 261 134 55 chr2 195248453 195248674 -55439180 + MIR SINE MIR 19 262 0 880 145 0 0 chr2 195249331 195249462 -55438392 + FLAM_A SINE Alu 3 133 0 306 301 68 20 chr2 195249473 195249619 -55438235 + L1M4 LINE L1 2409 2561 -3585 590 316 61 0 chr2 195249636 195249848 -55438006 + L2 LINE L2 2622 2846 -468 2324 86 3 3 chr2 195250242 195250543 -55437311 - AluY SINE Alu -10 301 1 352 243 49 7 chr2 195250712 195250856 -55436998 - L1MEd LINE L1 -5942 177 28 1349 260 30 12 chr2 195251081 195251508 -55436346 + L1ME3A LINE L1 5485 5919 -251 1333 229 88 35 chr2 195252306 195252772 -55435082 + HAL1b LINE L1 453 954 -394 2560 50 0 0 chr2 195252772 195253074 -55434780 - AluY SINE Alu -8 303 2 1333 229 88 35 chr2 195253074 195253152 -55434702 + HAL1b LINE L1 954 1026 -322 58 28 0 0 chr2 195253152 195253224 -55434630 + AT_rich Low_complexity Low_complexity 1 72 0 725 223 82 19 chr2 195253259 195253465 -55434389 - L2 LINE L2 0 3313 3095 337 236 49 49 chr2 195253522 195253666 -55434188 + HAL1b LINE L1 1175 1318 -30 1251 196 123 0 chr2 195253781 195254082 -55433772 + L1MC4 LINE L1 5618 5955 -2087 3283 208 3 0 chr2 195254082 195254698 -55433156 + L1 LINE L1 950 1567 -5282 * 11544 165 26 37 chr2 195254695 195255475 -55432379 + L1 LINE L1 3434 4221 -2627 207 69 0 0 chr2 195255475 195255504 -55432350 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1923 128 28 3 chr2 195255506 195255788 -55432066 - AluSx SINE Alu -23 289 1 11544 165 26 37 chr2 195255788 195256491 -55431363 + L1 LINE L1 4222 4931 -1917 2057 131 3 14 chr2 195256491 195256788 -55431066 + AluSx SINE Alu 1 294 -18 11544 165 26 37 chr2 195256788 195257080 -55430774 + L1 LINE L1 4931 5225 -1623 1894 107 55 24 chr2 195257080 195257370 -55430484 + AluSx SINE Alu 1 299 -13 11544 165 26 37 chr2 195257370 195258245 -55429609 + L1 LINE L1 5225 6060 -788 9482 168 19 6 chr2 195258237 195261264 -55426590 + L1PB2 LINE L1 3088 6149 -2 * 313 96 0 0 chr2 195261278 195261330 -55426524 + L1M LINE L1 5355 5406 -897 585 278 59 0 chr2 195261430 195261617 -55426237 - L3b LINE CR1 -284 1299 1102 518 298 93 23 chr2 195261738 195262040 -55425814 - MER102b DNA MER1_type 0 341 19 636 13 0 0 chr2 195262055 195262132 -55425722 - L1PA2 LINE L1 -338 5817 5741 3174 14 0 0 chr2 195262132 195262490 -55425364 + L1PA2 LINE L1 5795 6155 0 237 213 21 0 chr2 195262692 195262739 -55425115 + L2 LINE L2 3262 3309 -4 224 156 44 0 chr2 195262794 195262839 -55425015 - MIR SINE MIR -79 183 137 1856 164 3 13 chr2 195263149 195263459 -55424395 - AluJo SINE Alu -3 309 3 21 0 0 0 chr2 195263556 195263577 -55424277 + AT_rich Low_complexity Low_complexity 1 21 0 1947 101 0 0 chr2 195263579 195263826 -55424028 - AluSq SINE Alu 0 313 67 2777 20 3 0 chr2 195263826 195264127 -55423727 + SVA Other Other 1085 1386 0 637 52 0 0 chr2 195264131 195264208 -55423646 - AluSq SINE Alu -233 79 3 419 232 161 40 chr2 195264283 195264507 -55423347 - L1MC/D LINE L1 -2039 5838 5588 219 327 0 0 chr2 195264983 195265038 -55422816 + C-rich Low_complexity Low_complexity 1 55 0 476 253 34 13 chr2 195265434 195265586 -55422268 + MLT1L LTR MaLR 104 253 -342 566 346 119 19 chr2 195265851 195266049 -55421805 + L2 LINE L2 2923 3166 -106 1569 167 3 73 chr2 195266049 195266366 -55421488 + AluJo SINE Alu 1 295 -17 566 346 119 19 chr2 195266366 195266485 -55421369 + L2 LINE L2 3166 3272 0 662 272 115 18 chr2 195266577 195266957 -55420897 + L1ME4a LINE L1 5552 5981 -140 1632 188 0 26 chr2 195266957 195267261 -55420593 + AluJb SINE Alu 12 307 -5 662 272 115 18 chr2 195267261 195267314 -55420540 + L1ME4a LINE L1 5981 6027 -94 347 325 65 26 chr2 195267444 195267645 -55420209 + MIR SINE MIR 15 216 -46 383 276 89 15 chr2 195268291 195268790 -55419064 - L1MC/D LINE L1 -743 5472 5005 319 322 67 27 chr2 195268792 195268941 -55418913 - L1MC/D LINE L1 -1251 4964 4810 1672 231 27 29 chr2 195268955 195269474 -55418380 - L1MC/D LINE L1 -1886 4329 3812 563 248 79 90 chr2 195269489 195270303 -55417551 - L1MC/D LINE L1 -4616 1780 976 304 243 19 19 chr2 195270410 195270517 -55417337 - L1MC/D LINE L1 -6241 155 49 313 221 0 13 chr2 195270520 195270597 -55417257 - L1MEc LINE L1 -4758 2067 1992 244 247 13 0 chr2 195270683 195270760 -55417094 - L1MEc LINE L1 -5425 1117 1040 558 309 22 26 chr2 195270804 195271076 -55416778 - L1MEc LINE L1 -6091 734 464 332 323 79 30 chr2 195271553 195271856 -55415998 + L2 LINE L2 2994 3311 -2 268 283 30 130 chr2 195272552 195272891 -55414963 - L2 LINE L2 -107 3165 2861 22 35 0 0 chr2 195273585 195273614 -55414240 + AT_rich Low_complexity Low_complexity 1 29 0 182 345 0 35 chr2 195274268 195274355 -55413499 - L2 LINE L2 -2782 532 449 196 304 18 0 chr2 195274717 195274773 -55413081 - L2 LINE L2 -5 3267 3211 22 0 0 0 chr2 195275163 195275185 -55412669 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 195275211 195275242 -55412612 + AT_rich Low_complexity Low_complexity 1 31 0 247 308 179 0 chr2 195276235 195276352 -55411502 + L2 LINE L2 3134 3271 -1 257 279 16 0 chr2 195276513 195276574 -55411280 - MIR SINE MIR 0 262 201 608 211 9 0 chr2 195277214 195277328 -55410526 + MIR SINE MIR 53 167 -95 1976 163 7 3 chr2 195277496 195277803 -55410051 - AluJo SINE Alu 0 312 5 561 361 87 31 chr2 195277873 195278289 -55409565 - L2 LINE L2 -11 3261 2823 1382 201 0 26 chr2 195278383 195278656 -55409198 + AluJo SINE Alu 34 299 -13 1175 336 94 29 chr2 195278656 195279493 -55408361 - L2 LINE L2 -618 2696 1805 244 281 16 0 chr2 195279516 195279580 -55408274 - L2 LINE L2 0 3272 3208 2125 134 38 14 chr2 195279583 195279949 -55407905 + THE1C LTR MaLR 1 375 0 281 308 103 67 chr2 195279951 195280204 -55407650 - L2 LINE L2 -2201 1113 852 575 304 101 79 chr2 195280268 195280791 -55407063 + L2 LINE L2 2677 3271 -1 194 194 0 0 chr2 195280794 195280825 -55407029 - MIR SINE MIR -146 116 86 34 0 0 0 chr2 195280849 195280883 -55406971 + AT_rich Low_complexity Low_complexity 1 34 0 267 186 132 70 chr2 195282786 195282915 -55404939 - L1ME4a LINE L1 -7 6114 5978 46 33 0 0 chr2 195283344 195283404 -55404450 + AT_rich Low_complexity Low_complexity 1 60 0 804 281 46 0 chr2 195283415 195283611 -55404243 + MIR SINE MIR 7 211 -51 222 325 123 0 chr2 195283704 195283818 -55404036 + L2 LINE L2 3139 3266 -6 469 227 164 0 chr2 195283965 195284093 -55403761 - MIR SINE MIR -6 256 108 198 171 0 0 chr2 195285646 195285681 -55402173 + L2 LINE L2 3230 3264 -8 374 259 53 38 chr2 195285788 195285919 -55401935 - L2 LINE L2 -1 3312 3180 2187 119 3 3 chr2 195285919 195286222 -55401632 + AluSx SINE Alu 1 303 -9 644 118 0 0 chr2 195287103 195287196 -55400658 - AluSg/x SINE Alu -12 298 206 2183 110 7 10 chr2 195287854 195288163 -55399691 + AluSx SINE Alu 2 309 -3 242 111 0 0 chr2 195288289 195288325 -55399529 + L1MA4A LINE L1 5437 5472 -831 479 154 0 34 chr2 195288326 195288443 -55399411 + (TA)n Simple_repeat Simple_repeat 1 113 0 315 189 21 74 chr2 195288443 195288538 -55399316 - L1MC4 LINE L1 -1339 6703 6614 279 175 0 0 chr2 195288540 195288597 -55399257 + (TA)n Simple_repeat Simple_repeat 1 57 0 1804 120 100 0 chr2 195288597 195288856 -55398998 - AluSg SINE Alu -25 285 1 4830 114 35 16 chr2 195288856 195289182 -55398672 + L1MA4A LINE L1 5460 5778 -525 180 111 0 0 chr2 195289182 195289209 -55398645 + (CA)n Simple_repeat Simple_repeat 2 28 0 4830 114 35 16 chr2 195289209 195289709 -55398145 + L1MA4A LINE L1 5778 6302 -1 1743 171 23 23 chr2 195289731 195290117 -55397737 + L1MC2 LINE L1 5954 6339 -5 429 265 42 36 chr2 195290240 195290406 -55397448 - MIR SINE MIR -78 184 18 212 290 81 64 chr2 195291329 195291612 -55396242 - L2 LINE L2 -340 2974 2687 340 279 150 7 chr2 195291783 195291923 -55395931 - MIR SINE MIR -79 183 24 264 209 45 0 chr2 195292035 195292102 -55395752 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 1140 180 87 59 chr2 195292105 195292394 -55395460 - MER58B DNA MER1_type -42 299 3 245 275 106 42 chr2 195292902 195293044 -55394810 - L2 LINE L2 -23 3290 3140 4208 144 29 20 chr2 195293846 195294640 -55393214 + L1MB3 LINE L1 5381 6181 -2 21 0 0 0 chr2 195295749 195295770 -55392084 + AT_rich Low_complexity Low_complexity 1 21 0 218 250 19 0 chr2 195296410 195296462 -55391392 + L2 LINE L2 3261 3313 0 1307 124 56 0 chr2 195296844 195297094 -55390760 + L1MA5 LINE L1 6037 6300 0 24 0 0 0 chr2 195297096 195297120 -55390734 + AT_rich Low_complexity Low_complexity 1 24 0 265 340 122 6 chr2 195298595 195298751 -55389103 - MIR3 SINE MIR -14 194 21 726 170 7 30 chr2 195298823 195298958 -55388896 + AluJb SINE Alu 3 134 -178 235 229 14 0 chr2 195298962 195299032 -55388822 + GA-rich Low_complexity Low_complexity 3 73 0 1527 156 55 7 chr2 195299675 195299983 -55387871 - MER33 DNA MER1_type 0 324 2 4185 167 158 49 chr2 195300146 195301464 -55386390 - Charlie1 DNA MER1_type 0 2761 1 256 362 45 10 chr2 195301903 195302085 -55385769 + MIR SINE MIR 12 197 -58 608 290 65 23 chr2 195302819 195303036 -55384818 - MIR SINE MIR -34 228 3 1132 99 138 0 chr2 195303147 195303328 -55384526 + MER30 DNA MER1_type 8 213 -17 3649 232 41 44 chr2 195303345 195303918 -55383936 - L1MEc LINE L1 -2526 3689 3116 2190 79 4 0 chr2 195303918 195304185 -55383669 - AluSg SINE Alu -21 289 22 3649 232 41 44 chr2 195304185 195304377 -55383477 - L1MEc LINE L1 -3099 3116 2925 207 0 0 0 chr2 195304377 195304400 -55383454 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 3649 232 41 44 chr2 195304400 195305087 -55382767 - L1MEc LINE L1 -3290 2925 2241 643 266 6 12 chr2 195305106 195305275 -55382579 - L1MEc LINE L1 -5834 562 395 702 248 64 60 chr2 195305309 195305552 -55382302 - L1MEc LINE L1 -6078 318 72 533 154 179 12 chr2 195305552 195305714 -55382140 + MER53 DNA DNA 1 189 0 702 248 64 60 chr2 195305714 195305752 -55382102 - L1MEc LINE L1 -6324 72 36 574 359 26 5 chr2 195306181 195306373 -55381481 + MER91A DNA MER1_type 1 196 0 2200 122 6 10 chr2 195306798 195307110 -55380744 - AluSx SINE Alu -1 311 1 29062 94 7 9 chr2 195307538 195311898 -55375956 + L1P LINE L1 18 4369 -1777 2172 109 0 32 chr2 195314390 195314702 -55373152 + AluSx SINE Alu 1 302 -10 297 399 5 21 chr2 195314811 195315004 -55372850 + L3 LINE CR1 55 244 -1333 2100 117 0 20 chr2 195315305 195315603 -55372251 + AluSx SINE Alu 1 292 -20 206 105 26 0 chr2 195315736 195315774 -55372080 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 284 313 54 9 chr2 195317058 195317170 -55370684 + L2 LINE L2 2637 2753 -561 32 43 0 0 chr2 195317564 195317610 -55370244 + AT_rich Low_complexity Low_complexity 1 46 0 458 278 37 6 chr2 195317657 195317823 -55370031 - MIR SINE MIR -63 145 30 190 320 202 61 chr2 195320148 195320278 -55367576 - L2 LINE L2 -634 2680 2570 1962 94 12 94 chr2 195320278 195320608 -55367246 - AluSx SINE Alu -9 303 1 190 320 202 61 chr2 195320608 195320724 -55367130 - L2 LINE L2 -744 2570 2399 276 248 46 28 chr2 195320730 195320839 -55367015 + (TCTCTG)n Simple_repeat Simple_repeat 2 112 0 242 230 14 14 chr2 195321717 195321791 -55366063 + GA-rich Low_complexity Low_complexity 1 74 0 495 296 19 19 chr2 195322331 195322493 -55365361 + MER5B DNA MER1_type 17 178 0 254 306 113 38 chr2 195322755 195322941 -55364913 - L2 LINE L2 -188 3084 2885 492 250 61 12 chr2 195323201 195323365 -55364489 - MIR SINE MIR -48 214 43 463 290 0 0 chr2 195324303 195324403 -55363451 + MER81 DNA DNA 15 114 0 1811 133 96 12 chr2 195324643 195324967 -55362887 + MLT2D LTR ERVL 1 351 -63 577 83 31 0 chr2 195324967 195325063 -55362791 + (TCTA)n Simple_repeat Simple_repeat 4 102 0 414 312 69 57 chr2 195326264 195326470 -55361384 - HERV16 LTR ERVL -385 5379 5177 1939 111 0 28 chr2 195326470 195326785 -55361069 - AluSx SINE Alu 0 309 3 414 312 69 57 chr2 195326785 195327095 -55360759 - HERV16 LTR ERVL -587 5177 4781 328 209 57 13 chr2 195327119 195327277 -55360577 + (TCTA)n Simple_repeat Simple_repeat 2 166 0 2471 325 73 44 chr2 195327294 195328855 -55358999 - HERV16 LTR ERVL -1065 4699 3093 396 0 0 0 chr2 195328867 195328911 -55358943 + (TG)n Simple_repeat Simple_repeat 2 45 0 617 295 38 46 chr2 195329159 195329479 -55358375 - HERV16 LTR ERVL -4381 615 329 352 231 109 48 chr2 195329750 195329897 -55357957 - LTR16C LTR ERVL 0 491 336 305 341 16 16 chr2 195330490 195330616 -55357238 - MIR3 SINE MIR -6 202 77 256 75 0 50 chr2 195331014 195331054 -55356800 - HSMAR1 DNA Mariner 0 1287 1250 384 203 0 0 chr2 195332689 195332758 -55355096 - L1MD2 LINE L1 -116 6243 6175 1963 120 0 14 chr2 195333120 195333404 -55354450 + AluSx SINE Alu 1 280 -32 234 0 0 0 chr2 195333404 195333430 -55354424 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 253 242 42 8 chr2 195333550 195333694 -55354160 + (TA)n Simple_repeat Simple_repeat 1 148 0 4536 209 54 37 chr2 195333696 195335049 -55352805 - L1MD2 LINE L1 -8 6351 4989 440 193 11 0 chr2 195335049 195335137 -55352717 - AluY SINE Alu -6 305 217 562 250 34 28 chr2 195335142 195335318 -55352536 - L1MD2 LINE L1 -1150 4996 4820 2024 170 2 76 chr2 195335688 195336082 -55351772 - MLT1A1 LTR MaLR 0 365 1 2164 95 0 11 chr2 195336510 195336825 -55351029 + AluSg SINE Alu 1 312 0 220 268 0 0 chr2 195336954 195337010 -55350844 + CT-rich Low_complexity Low_complexity 1 56 0 1692 166 40 0 chr2 195337248 195337526 -55350328 - AluJb SINE Alu -23 289 1 1681 194 152 22 chr2 195337606 195338008 -55349846 - MLT1F1 LTR MaLR -113 454 1 626 256 85 6 chr2 195338047 195338211 -55349643 - MER45A DNA AcHobo 0 178 2 435 230 66 92 chr2 195338211 195338407 -55349447 + MIR SINE MIR 8 198 -64 1394 218 55 96 chr2 195340273 195340702 -55347152 + LTR33A LTR ERVL 28 473 -50 1940 148 0 0 chr2 195340702 195340985 -55346869 + AluJo SINE Alu 1 283 -29 248 0 31 0 chr2 195340985 195341017 -55346837 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 1394 218 55 96 chr2 195341017 195341096 -55346758 + LTR33A LTR ERVL 471 516 -7 331 200 120 56 chr2 195342687 195342700 -55345154 - L2 LINE L2 0 3313 3302 189 107 0 0 chr2 195342700 195342728 -55345126 + (CATG)n Simple_repeat Simple_repeat 3 30 0 331 200 120 56 chr2 195342728 195342839 -55345015 - L2 LINE L2 -11 3302 3181 1269 120 0 35 chr2 195342975 195343203 -55344651 + AluSg/x SINE Alu 110 312 0 1482 135 108 42 chr2 195343280 195343568 -55344286 + AluJo SINE Alu 5 311 -1 1646 201 89 15 chr2 195344169 195344507 -55343347 - MLT1A2 LTR MaLR -11 363 1 208 327 73 45 chr2 195345605 195345715 -55342139 + L2 LINE L2 3150 3262 -10 248 211 296 0 chr2 195346821 195346892 -55340962 - L2 LINE L2 -22 3291 3200 29 0 0 0 chr2 195347832 195347861 -55339993 + AT_rich Low_complexity Low_complexity 1 29 0 2820 112 35 9 chr2 195347956 195348383 -55339471 - Tigger2 DNA MER2_type 0 2718 2281 518 220 28 14 chr2 195348386 195348527 -55339327 + MIR SINE MIR 116 258 -4 1590 165 0 53 chr2 195348775 195349060 -55338794 + AluJo SINE Alu 12 281 -31 21 0 0 0 chr2 195349060 195349081 -55338773 + AT_rich Low_complexity Low_complexity 1 21 0 2397 93 0 0 chr2 195349707 195350008 -55337846 - AluSg SINE Alu -9 301 1 313 267 0 0 chr2 195350794 195350854 -55337000 + MIR SINE MIR 14 73 -189 1186 238 172 48 chr2 195350854 195351314 -55336540 - MLT1G3 LTR MaLR 0 555 5 350 211 202 18 chr2 195351347 195351461 -55336393 + MIR SINE MIR 107 241 -21 472 264 149 0 chr2 195354852 195355000 -55332854 - MIR SINE MIR 0 262 93 2634 162 56 0 chr2 195355011 195355407 -55332447 - MER47B DNA MER2_type 0 418 1 212 256 163 47 chr2 195357331 195357460 -55330394 - MIR SINE MIR -16 246 103 181 355 16 0 chr2 195359268 195359330 -55328524 - MIR3 SINE MIR -6 202 140 329 257 38 0 chr2 195359852 195359957 -55327897 + MER103 DNA DNA 52 160 -6 309 288 71 29 chr2 195360481 195360762 -55327092 - L1M4 LINE L1 -1542 4604 4312 2304 97 13 3 chr2 195360893 195361201 -55326653 - AluSp SINE Alu -2 311 1 1385 211 57 0 chr2 195361203 195361482 -55326372 - AluJo SINE Alu -17 295 1 450 268 107 86 chr2 195361551 195361614 -55326240 - L2 LINE L2 0 3313 3253 1758 166 7 10 chr2 195361614 195361916 -55325938 - AluJo SINE Alu -7 305 5 450 268 107 86 chr2 195361916 195362237 -55325617 - L2 LINE L2 -60 3253 2921 180 0 0 0 chr2 195362593 195362613 -55325241 + (CAGGT)n Simple_repeat Simple_repeat 2 21 0 757 265 28 24 chr2 195362883 195363132 -55324722 + MIR SINE MIR 13 262 0 247 282 78 0 chr2 195363259 195363362 -55324492 + L1ME4a LINE L1 5965 6075 -46 22 0 0 0 chr2 195363387 195363409 -55324445 + AT_rich Low_complexity Low_complexity 1 22 0 3051 155 75 12 chr2 195364751 195365312 -55322542 - MER7C DNA MER2_type -5 597 2 473 308 53 16 chr2 195366162 195366409 -55321445 - L1ME4a LINE L1 -264 5857 5602 584 274 50 30 chr2 195368106 195368307 -55319547 - MLT1I LTR MaLR -4 405 201 365 284 117 31 chr2 195368888 195369050 -55318804 - MER91A DNA MER1_type -19 177 2 292 239 57 11 chr2 195371609 195371697 -55316157 - MIR SINE MIR -76 132 41 22 0 0 0 chr2 195371879 195371901 -55315953 + AT_rich Low_complexity Low_complexity 1 22 0 1925 206 16 22 chr2 195374813 195375182 -55312672 - MLT1A2 LTR MaLR -4 370 4 3483 154 28 2 chr2 195375679 195376258 -55311596 - L1MB3 LINE L1 -1 6182 5589 187 239 141 84 chr2 195376294 195376507 -55311347 - L2 LINE L2 -557 2757 2533 274 267 14 96 chr2 195377097 195377243 -55310611 + L2 LINE L2 3139 3272 0 235 238 63 0 chr2 195377253 195377316 -55310538 - L3b LINE CR1 -85 1498 1432 207 375 50 38 chr2 195377715 195377875 -55309979 - L2 LINE L2 -21 3251 3090 781 187 0 43 chr2 195378083 195378222 -55309632 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr2 195378439 195378460 -55309394 + AT_rich Low_complexity Low_complexity 1 21 0 742 294 76 74 chr2 195379622 195379803 -55308051 - MLT1K LTR MaLR -2 586 407 2332 106 0 13 chr2 195379803 195380114 -55307740 - AluSx SINE Alu -5 307 1 742 294 76 74 chr2 195380114 195380378 -55307476 - MLT1K LTR MaLR -181 407 140 2375 95 3 0 chr2 195381590 195381895 -55305959 - AluSg1 SINE Alu -3 306 1 591 239 97 0 chr2 195383011 195383166 -55304688 + MIR SINE MIR 85 254 -8 2211 155 46 3 chr2 195384778 195385126 -55302728 - MLT1A1 LTR MaLR -2 363 1 283 317 106 47 chr2 195387007 195387329 -55300525 - MLT1K LTR MaLR -75 513 173 849 241 35 0 chr2 195388870 195389069 -55298785 - MLT1E1 LTR MaLR -1 653 448 275 269 125 39 chr2 195390073 195390177 -55297677 + MIR SINE MIR 32 144 -64 1031 227 16 24 chr2 195390179 195390426 -55297428 - MIR SINE MIR 0 262 18 263 260 188 0 chr2 195391147 195391243 -55296611 + MIR SINE MIR 123 236 -26 1972 152 0 3 chr2 195391329 195391625 -55296229 - AluSx SINE Alu -17 295 1 262 304 68 34 chr2 195392684 195392832 -55295022 + MIR SINE MIR 25 177 -85 1932 149 7 0 chr2 195393342 195393643 -55294211 + AluJb SINE Alu 1 303 -9 445 246 41 92 chr2 195393802 195393937 -55293917 - MIR SINE MIR -1 261 137 2335 81 0 7 chr2 195393937 195394234 -55293620 + AluSq SINE Alu 1 295 -18 445 246 41 92 chr2 195394234 195394293 -55293561 - MIR SINE MIR -125 137 77 1224 134 16 0 chr2 195394701 195394888 -55292966 - L1MB3 LINE L1 -328 5855 5666 562 128 13 0 chr2 195395490 195395568 -55292286 - MADE1 DNA Mariner -1 79 1 527 255 22 97 chr2 195397262 195397529 -55290325 - MER112 DNA MER1_type -11 249 3 333 264 27 27 chr2 195397796 195397906 -55289948 + MER5B DNA MER1_type 1 110 -68 272 296 0 23 chr2 195398259 195398347 -55289507 + CT-rich Low_complexity Low_complexity 5 90 0 2547 135 152 29 chr2 195399070 195399607 -55288247 - MER4B LTR ERV1 0 903 1 908 244 117 104 chr2 195399611 195400151 -55287703 - MLT1H LTR MaLR 0 549 3 3726 125 49 0 chr2 195400187 195400715 -55287139 - MER41A LTR ERV1 0 554 1 357 264 23 0 chr2 195400858 195400945 -55286909 - L2 LINE L2 -2 3311 3223 23 33 0 0 chr2 195403199 195403229 -55284625 + AT_rich Low_complexity Low_complexity 1 30 0 937 178 77 24 chr2 195404592 195404800 -55283054 + MER20 DNA MER1_type 1 219 0 395 305 175 19 chr2 195405261 195405415 -55282439 + MER5A DNA MER1_type 7 184 -5 653 242 146 17 chr2 195405518 195405696 -55282158 - MIR SINE MIR -4 258 58 216 251 171 48 chr2 195406206 195406393 -55281461 + L2 LINE L2 2834 3043 -229 336 245 31 98 chr2 195406523 195406686 -55281168 + MIR SINE MIR 47 198 -64 2264 87 7 13 chr2 195407172 195407472 -55280382 - AluSg SINE Alu -12 298 1 745 161 54 31 chr2 195407472 195407602 -55280252 - FLAM_A SINE Alu 0 133 1 1661 144 70 29 chr2 195408217 195408558 -55279296 + MER46B DNA MER2_type 2 231 -5 211 259 139 60 chr2 195408700 195408901 -55278953 + L2 LINE L2 2687 2903 -411 642 192 8 24 chr2 195410329 195410454 -55277400 - L2 LINE L2 0 3313 3191 2157 108 3 0 chr2 195411121 195411431 -55276423 + AluSp SINE Alu 1 311 0 245 342 242 0 chr2 195412360 195412480 -55275374 - L2 LINE L2 -1 3271 3123 286 239 15 0 chr2 195412515 195412582 -55275272 - MER94 DNA DNA -12 122 55 817 283 81 70 chr2 195412768 195413303 -55274551 - L2 LINE L2 0 3313 2778 1740 235 113 86 chr2 195413711 195413796 -55274058 - MER21B LTR ERV1 -60 803 722 4488 114 19 17 chr2 195413796 195414428 -55273426 - MER41B LTR ERV1 -2 633 1 1740 235 113 86 chr2 195414428 195415124 -55272730 - MER21B LTR ERV1 -141 722 1 1924 258 200 41 chr2 195415348 195416817 -55271037 + L2 LINE L2 1597 3313 0 2148 130 0 0 chr2 195417042 195417335 -55270519 - AluSx SINE Alu -19 293 1 241 182 39 39 chr2 195419519 195419596 -55268258 - Charlie7 DNA MER1_type -109 2503 2427 * 471 187 22 11 chr2 195419585 195419676 -55268178 - Charlie7 DNA MER1_type -2516 96 5 271 253 51 0 chr2 195419830 195419909 -55267945 - MLT1I LTR MaLR -3 406 324 * 373 268 39 24 chr2 195419877 195420004 -55267850 - MLT1J2 LTR MaLR -48 402 274 826 124 0 0 chr2 195420030 195420151 -55267703 - AluSp/q SINE Alu 0 313 193 399 33 83 33 chr2 195470151 195470211 -55217643 - THE1B LTR MaLR -301 63 1 1073 119 23 11 chr2 195470211 195470387 -55217467 + L1MB3 LINE L1 6005 6182 -1 830 290 91 33 chr2 195470707 195471159 -55216695 - L1ME3 LINE L1 -332 5830 5353 467 288 30 0 chr2 195471164 195471296 -55216558 + L2 LINE L2 3178 3313 0 1227 291 121 0 chr2 195472258 195472705 -55215149 + L2 LINE L2 2805 3305 -8 696 199 31 77 chr2 195473134 195473359 -55214495 - L1MC4 LINE L1 -1211 6597 6402 336 253 0 0 chr2 195473453 195473528 -55214326 - L1MC4a LINE L1 -1373 6435 6361 1140 199 69 39 chr2 195473557 195473681 -55214173 - L1ME2 LINE L1 -21 6143 6024 2698 129 3 3 chr2 195473681 195474045 -55213809 + THE1B LTR MaLR 1 364 0 1140 199 69 39 chr2 195474045 195474226 -55213628 - L1ME2 LINE L1 -140 6024 5829 1859 217 52 23 chr2 195474260 195474388 -55213466 - L1ME2 LINE L1 -545 5619 5496 2097 116 17 7 chr2 195474388 195474689 -55213165 - AluSx SINE Alu -8 304 1 1859 217 52 23 chr2 195474689 195475282 -55212572 - L1ME2 LINE L1 -668 5496 4878 1887 156 0 17 chr2 195476730 195477032 -55210822 + AluJb SINE Alu 1 297 -15 2091 125 3 3 chr2 195477349 195477646 -55210208 - AluSx SINE Alu -15 297 1 335 219 68 0 chr2 195478207 195478280 -55209574 + MIR SINE MIR 76 153 -109 1277 91 63 0 chr2 195478302 195478477 -55209377 + LTR9B LTR ERV1 1 186 -458 2299 81 7 3 chr2 195478477 195478774 -55209080 + AluY SINE Alu 1 298 -13 3441 128 16 6 chr2 195478792 195479301 -55208553 + LTR9B LTR ERV1 131 644 0 3577 188 75 12 chr2 195479364 195480054 -55207800 - MER50 LTR ERV1 0 734 1 953 156 156 16 chr2 195480164 195480356 -55207498 + MER4B LTR ERV1 1 219 -391 1755 108 48 19 chr2 195480356 195480624 -55207230 + AluSg SINE Alu 1 276 -34 1481 133 20 102 chr2 195480814 195480876 -55206978 - MER33 DNA MER1_type -2262 323 257 2507 47 13 0 chr2 195480876 195481045 -55206809 - AluY SINE Alu -9 302 126 225 0 0 0 chr2 195481045 195481070 -55206784 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2507 47 13 0 chr2 195481070 195481198 -55206656 - AluY SINE Alu -185 126 1 1481 133 20 102 chr2 195481198 195481487 -55206367 - MER33 DNA MER1_type -2328 257 1 1004 172 12 0 chr2 195481805 195481974 -55205880 + MLT2D LTR ERVL 11 181 -233 1632 229 34 36 chr2 195481981 195482007 -55205847 + L1MC4a LINE L1 6081 6106 -1702 1092 203 27 45 chr2 195482007 195482229 -55205625 + MER20 DNA MER1_type 2 219 0 1632 229 34 36 chr2 195482229 195482644 -55205210 + L1MC4a LINE L1 6106 7808 0 2239 111 3 0 chr2 195482673 195482971 -55204883 + AluSx SINE Alu 1 299 -13 2117 104 3 10 chr2 195483010 195483299 -55204555 + AluSc SINE Alu 6 292 -17 22 35 0 0 chr2 195483550 195483579 -55204275 + AT_rich Low_complexity Low_complexity 1 29 0 223 84 84 12 chr2 195483623 195483706 -55204148 + (TA)n Simple_repeat Simple_repeat 1 89 0 53 49 0 0 chr2 195483706 195483787 -55204067 + AT_rich Low_complexity Low_complexity 1 81 0 25 31 0 0 chr2 195484522 195484554 -55203300 + AT_rich Low_complexity Low_complexity 1 32 0 1617 103 0 5 chr2 195484792 195485005 -55202849 - AluSc SINE Alu -95 214 3 880 172 47 12 chr2 195485125 195485294 -55202560 - MER5B DNA MER1_type -3 175 1 1831 82 145 0 chr2 195485352 195485621 -55202233 + AluSx SINE Alu 1 308 -4 221 232 0 18 chr2 195485961 195486017 -55201837 + L2 LINE L2 3193 3247 -66 635 268 30 20 chr2 195486889 195487087 -55200767 + MIR SINE MIR 46 245 -17 418 136 0 15 chr2 195487495 195487561 -55200293 - U6 snRNA snRNA -42 65 1 725 105 72 59 chr2 195487672 195487824 -55200030 - L1MB3 LINE L1 -321 5862 5709 183 42 0 0 chr2 195488680 195488704 -55199150 + (TG)n Simple_repeat Simple_repeat 1 24 0 184 250 340 0 chr2 195488826 195488926 -55198928 - MIR SINE MIR -70 192 59 2369 125 15 39 chr2 195490001 195490408 -55197446 - MER4E LTR ERV1 0 766 370 583 47 19 47 chr2 195490658 195490765 -55197089 + (TAGA)n Simple_repeat Simple_repeat 2 105 0 2430 199 113 21 chr2 195490766 195491331 -55196523 + L1MC4 LINE L1 6703 7331 -711 1987 123 7 32 chr2 195491331 195491640 -55196214 + AluSx SINE Alu 11 311 -1 2430 199 113 21 chr2 195491640 195491692 -55196162 + L1MC4 LINE L1 7331 7377 -665 5218 67 73 0 chr2 195491732 195492373 -55195481 - LTR12 LTR ERV1 0 688 1 481 258 0 0 chr2 195492428 195492552 -55195302 + L1MC4 LINE L1 7918 8041 -1 1414 256 46 8 chr2 195492554 195492944 -55194910 - L2 LINE L2 -713 2601 2197 367 245 92 46 chr2 195493619 195493815 -55194039 - L1ME3A LINE L1 -1 6169 5965 * 2515 224 43 56 chr2 195493811 195494550 -55193304 - L1MC5 LINE L1 -580 7381 6629 2024 95 14 7 chr2 195494550 195494833 -55193021 - AluSp SINE Alu -4 309 25 2515 224 43 56 chr2 195494833 195494986 -55192868 - L1MC5 LINE L1 -1332 6629 6476 348 276 230 8 chr2 195495178 195495439 -55192415 - HAL1b LINE L1 -642 706 388 2323 276 91 46 chr2 195495652 195496660 -55191194 + L2 LINE L2 1296 2349 -965 2207 101 0 26 chr2 195497030 195497337 -55190517 - AluSx SINE Alu -13 299 1 1367 286 99 16 chr2 195498505 195499291 -55188563 + L2 LINE L2 2343 3183 -130 1011 245 185 0 chr2 195499296 195499582 -55188272 + MLT1G LTR MaLR 2 340 -250 2139 63 11 7 chr2 195499724 195500008 -55187846 - LTR10C LTR ERV1 -306 285 1 247 308 39 0 chr2 195500009 195500087 -55187767 - L2 LINE L2 -226 3046 2966 271 300 36 18 chr2 195500267 195500377 -55187477 + MIR3 SINE MIR 96 207 -1 * 708 285 83 60 chr2 195500375 195500738 -55187116 - L3 LINE CR1 -341 1236 860 3396 143 71 56 chr2 195500738 195500905 -55186949 + LTR9 LTR ERV1 1 164 -448 2427 68 0 26 chr2 195500905 195501214 -55186640 - AluY SINE Alu -10 301 1 3396 143 71 56 chr2 195501214 195501649 -55186205 + LTR9 LTR ERV1 164 612 0 708 285 83 60 chr2 195501649 195501717 -55186137 - L3 LINE CR1 -717 860 795 29 0 0 0 chr2 195501819 195501848 -55186006 + AT_rich Low_complexity Low_complexity 1 29 0 5249 204 65 26 chr2 195503267 195503288 -55184566 - L1M4 LINE L1 -4940 1915 1896 1887 173 7 0 chr2 195503288 195503588 -55184266 - AluJo SINE Alu -8 304 3 5249 204 65 26 chr2 195503588 195505120 -55182734 - L1M4 LINE L1 -4959 1896 216 1560 226 99 96 chr2 195505160 195505856 -55181998 + MER61E LTR ERV1 1 566 -3 853 188 52 26 chr2 195505861 195506053 -55181801 - L1M4 LINE L1 -6652 207 11 237 289 0 36 chr2 195506056 195506139 -55181715 + MER91B DNA MER1_type 50 129 -61 411 221 11 21 chr2 195506164 195506259 -55181595 + MER91B DNA MER1_type 97 190 0 432 188 188 73 chr2 195506332 195506403 -55181451 + MER91B DNA MER1_type 2 63 -127 1793 271 78 12 chr2 195506403 195506890 -55180964 + LTR33 LTR ERVL 1 519 -2 432 188 188 73 chr2 195506890 195506983 -55180871 + MER91B DNA MER1_type 63 185 -5 198 342 70 51 chr2 195507110 195507268 -55180586 - L2 LINE L2 -609 2705 2545 507 276 71 62 chr2 195507432 195507642 -55180212 - MIR SINE MIR -11 251 40 434 263 18 0 chr2 195507844 195507958 -55179896 - MIR SINE MIR 0 262 147 257 259 188 18 chr2 195507971 195508083 -55179771 + L2 LINE L2 3182 3312 -1 * 336 273 160 9 chr2 195508082 195508211 -55179643 - MIR SINE MIR -66 142 3 370 290 30 0 chr2 195509482 195509582 -55178272 - MIR3 SINE MIR -6 202 100 929 263 139 7 chr2 195509945 195510219 -55177635 + MLT2E LTR ERVL 1 310 -318 397 280 68 0 chr2 195510328 195510446 -55177408 + MLT1E1 LTR MaLR 529 654 0 1957 236 18 26 chr2 195510572 195511073 -55176781 + LTR31 LTR ERV1 105 601 -18 635 193 95 38 chr2 195511089 195511274 -55176580 - MLT1E LTR MaLR -283 371 70 2095 176 21 6 chr2 195511335 195511664 -55176190 - MER1B DNA MER1_type 0 337 4 5735 236 59 53 chr2 195511689 195512212 -55175642 - L1MEc LINE L1 -1898 4317 3799 2262 99 7 0 chr2 195512212 195512504 -55175350 - AluSc SINE Alu -14 295 2 5735 236 59 53 chr2 195512504 195512775 -55175079 - L1MEc LINE L1 -2416 3799 3531 5467 44 3 6 chr2 195512775 195513406 -55174448 - SVA Other Other 0 1386 758 5735 236 59 53 chr2 195513406 195513772 -55174082 - L1MEc LINE L1 -2684 3531 3169 2154 128 3 0 chr2 195513772 195514070 -55173784 - AluSg SINE Alu -11 299 1 5735 236 59 53 chr2 195514070 195515569 -55172285 - L1MEc LINE L1 -3046 3169 1689 1732 287 101 39 chr2 195515608 195516615 -55171239 - L1MEc LINE L1 -5000 1205 136 1101 253 73 68 chr2 195516615 195517316 -55170538 + L2 LINE L2 2593 3308 -5 324 235 62 0 chr2 195517566 195517647 -55170207 + MIR SINE MIR 65 150 -112 841 263 227 5 chr2 195517663 195518073 -55169781 - MLT1J LTR MaLR -2 509 9 1981 92 11 11 chr2 195518142 195518445 -55169409 + AluY SINE Alu 1 303 0 1055 137 43 76 chr2 195519342 195519553 -55168301 + MER20 DNA MER1_type 16 219 0 2930 183 163 34 chr2 195519654 195520386 -55167468 - LTR1B LTR ERV1 0 826 1 1490 165 4 15 chr2 195521579 195521852 -55166002 + AluSx SINE Alu 21 290 -22 186 43 0 0 chr2 195521852 195521875 -55165979 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 321 245 47 57 chr2 195523094 195523200 -55164654 - MER91A DNA MER1_type -85 111 7 228 338 43 61 chr2 195524375 195524606 -55163248 - L2 LINE L2 -218 3054 2828 277 186 51 0 chr2 195524659 195524718 -55163136 - MLT1J LTR MaLR -31 480 419 326 272 0 89 chr2 195524812 195524970 -55162884 - MLT1J LTR MaLR -228 283 140 2170 109 6 16 chr2 195525584 195525897 -55161957 - AluSg SINE Alu 0 310 1 2257 79 21 0 chr2 195525903 195526193 -55161661 - AluSc SINE Alu -13 296 1 2415 78 3 3 chr2 195527786 195528093 -55159761 + AluY SINE Alu 1 307 -4 274 228 10 59 chr2 195528125 195528226 -55159628 - MIR SINE MIR 0 262 167 240 207 0 17 chr2 195528214 195528272 -55159582 + L2 LINE L2 1222 1278 -2036 * 573 242 25 6 chr2 195528406 195528563 -55159291 + MLT2E LTR ERVL 469 628 0 26 0 0 0 chr2 195529299 195529325 -55158529 + AT_rich Low_complexity Low_complexity 1 26 0 261 299 140 9 chr2 195529502 195529609 -55158245 - L2 LINE L2 -5 3267 3147 442 216 43 35 chr2 195529609 195529725 -55158129 + MER103 DNA DNA 39 155 -11 2149 121 0 3 chr2 195530493 195530790 -55157064 + AluSx SINE Alu 1 296 -16 2401 92 0 3 chr2 195530792 195531098 -55156756 + AluY SINE Alu 1 305 -6 21 0 0 0 chr2 195531157 195531178 -55156676 + AT_rich Low_complexity Low_complexity 1 21 0 261 163 0 0 chr2 195531319 195531368 -55156486 + CT-rich Low_complexity Low_complexity 2 50 0 2273 254 24 58 chr2 195531395 195532138 -55155716 - L1ME1 LINE L1 -7 6954 6237 745 174 9 0 chr2 195532140 195532255 -55155599 + FLAM_C SINE Alu 2 117 -26 328 153 14 14 chr2 195532264 195532336 -55155518 + (TA)n Simple_repeat Simple_repeat 1 72 0 3676 230 49 24 chr2 195532349 195533498 -55154356 - L1ME1 LINE L1 -746 6195 5061 1790 267 100 42 chr2 195533599 195533923 -55153931 - L1ME1 LINE L1 -4971 1452 1148 3911 172 110 17 chr2 195533923 195534679 -55153175 - LTR1B LTR ERV1 0 826 1 1790 267 100 42 chr2 195534679 195535025 -55152829 - L1ME1 LINE L1 -5275 1148 743 647 311 125 34 chr2 195535098 195535625 -55152229 - L1ME1 LINE L1 -5826 597 23 240 59 0 0 chr2 195535795 195535829 -55152025 + (A)n Simple_repeat Simple_repeat 1 34 0 383 282 122 0 chr2 195536032 195536163 -55151691 - LTR67 LTR ERVL -6 551 405 1918 136 45 0 chr2 195536539 195536825 -55151029 + AluSx SINE Alu 3 301 -11 357 314 50 16 chr2 195536896 195537017 -55150837 - L2 LINE L2 -14 3258 3134 2103 79 15 0 chr2 195537149 195537415 -55150439 - AluSg SINE Alu 0 310 41 340 217 140 66 chr2 195538836 195539122 -55148732 - L1ME4a LINE L1 -34 6087 5781 1808 117 34 0 chr2 195539171 195539437 -55148417 - AluSq SINE Alu -37 276 2 180 0 0 0 chr2 195539488 195539508 -55148346 + (T)n Simple_repeat Simple_repeat 1 20 0 1558 179 3 64 chr2 195539530 195539860 -55147994 - AluJo SINE Alu -2 310 1 2253 93 0 32 chr2 195540258 195540571 -55147283 + AluSx SINE Alu 1 303 -9 2432 60 0 16 chr2 195540847 195541162 -55146692 + AluY SINE Alu 1 310 -1 727 100 0 0 chr2 195541222 195541322 -55146532 + L1MA3 LINE L1 6198 6297 -8 247 211 0 18 chr2 195542306 195542363 -55145491 + CT-rich Low_complexity Low_complexity 1 56 0 211 194 0 0 chr2 195542555 195542591 -55145263 + (CA)n Simple_repeat Simple_repeat 1 36 0 209 83 28 0 chr2 195542836 195542872 -55144982 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 6128 142 29 44 chr2 195543049 195544137 -55143717 - MER11C LTR ERVK 0 1071 1 756 306 81 59 chr2 195544151 195544743 -55143111 + MLT1L LTR MaLR 1 605 -10 2410 99 0 6 chr2 195544847 195545161 -55142693 - AluSx SINE Alu 0 312 1 818 164 34 20 chr2 195546938 195547084 -55140770 + AluJb SINE Alu 160 307 -5 2167 128 3 25 chr2 195547085 195547404 -55140450 + AluSx SINE Alu 1 312 0 2351 100 0 13 chr2 195548142 195548452 -55139402 + AluSq SINE Alu 1 306 -7 2106 128 3 0 chr2 195549091 195549381 -55138473 - AluSp SINE Alu -22 291 1 459 257 28 0 chr2 195549519 195549628 -55138226 + L2 LINE L2 3184 3295 -18 350 43 0 0 chr2 195549628 195549674 -55138180 + MADE1 DNA Mariner 1 46 -34 462 254 7 51 chr2 195549687 195549825 -55138029 - L2 LINE L2 0 3313 3182 2347 118 9 17 chr2 195550316 195550537 -55137317 + L1PA15 LINE L1 5823 6041 -124 2776 82 13 51 chr2 195550537 195550929 -55136925 + MER51B LTR ERV1 1 377 0 2347 118 9 17 chr2 195550929 195551053 -55136801 + L1PA15 LINE L1 6041 6165 0 28 29 0 0 chr2 195551113 195551148 -55136706 + AT_rich Low_complexity Low_complexity 1 35 0 205 256 0 0 chr2 195552800 195552843 -55135011 + L3 LINE CR1 1068 1110 -467 21 0 0 0 chr2 195553073 195553094 -55134760 + AT_rich Low_complexity Low_complexity 1 21 0 923 215 130 31 chr2 195553883 195554219 -55133635 + MER57A LTR ERV1 12 403 0 421 287 41 16 chr2 195554972 195555094 -55132760 + MIR3 SINE MIR 30 154 -54 2071 167 18 6 chr2 195556708 195557038 -55130816 - MER1B DNA MER1_type 0 337 4 334 237 260 34 chr2 195558517 195558694 -55129160 + L1MC4a LINE L1 5730 5946 -1862 321 207 0 0 chr2 195560037 195560095 -55127759 + L2 LINE L2 3253 3310 -3 1642 248 110 15 chr2 195561078 195562058 -55125796 + L1ME3A LINE L1 4996 6087 -83 22 35 0 0 chr2 195562081 195562110 -55125744 + AT_rich Low_complexity Low_complexity 1 29 0 212 184 53 0 chr2 195563994 195564032 -55123822 - MER5A DNA MER1_type -2 187 148 430 60 0 0 chr2 195564033 195564083 -55123771 - Alu SINE Alu -18 294 245 238 318 5 5 chr2 195564084 195564173 -55123681 - MER5B DNA MER1_type -36 153 54 2083 136 0 13 chr2 195564214 195564530 -55123324 + AluSx SINE Alu 1 312 0 837 216 7 7 chr2 195564925 195565078 -55122776 - Tigger3(Golem) DNA MER2_type -2876 153 1 2227 86 17 0 chr2 195565229 195565531 -55122323 + AluSp SINE Alu 1 307 -6 500 243 162 35 chr2 195567150 195567187 -55120667 + L2 LINE L2 3020 3051 -262 2298 68 7 10 chr2 195567187 195567481 -55120373 - AluSg SINE Alu -17 293 1 500 243 162 35 chr2 195567481 195567702 -55120152 + L2 LINE L2 3051 3311 -2 316 185 12 37 chr2 195568122 195568203 -55119651 + MER5A DNA MER1_type 30 108 -81 596 198 64 29 chr2 195568351 195568400 -55119454 - MER5B DNA MER1_type 0 178 132 195 69 0 0 chr2 195568400 195568429 -55119425 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 596 198 64 29 chr2 195568429 195568551 -55119303 - MER5B DNA MER1_type -46 132 1 578 211 50 61 chr2 195568709 195568889 -55118965 - MIR SINE MIR -14 248 71 1694 96 170 0 chr2 195570547 195570818 -55117036 + MER47A DNA MER2_type 1 317 -49 21 0 0 0 chr2 195572420 195572441 -55115413 + AT_rich Low_complexity Low_complexity 1 21 0 706 206 82 45 chr2 195572695 195572938 -55114916 + MER112 DNA MER1_type 5 256 0 405 170 19 66 chr2 195574678 195574784 -55113070 - MER3 DNA MER1_type 0 209 109 26 30 0 0 chr2 195575638 195575671 -55112183 + AT_rich Low_complexity Low_complexity 1 33 0 330 250 41 118 chr2 195576297 195576517 -55111337 + MER102b DNA MER1_type 123 325 -16 3587 123 90 13 chr2 195576601 195577388 -55110466 + Tigger1 DNA MER2_type 1 923 -1495 22 56 0 0 chr2 195578101 195578137 -55109717 + AT_rich Low_complexity Low_complexity 1 36 0 198 0 0 0 chr2 195578303 195578325 -55109529 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1126 193 19 5 chr2 195579864 195580077 -55107777 - MER58B DNA MER1_type 0 341 126 10041 108 22 10 chr2 195580627 195582142 -55105712 + Tigger1 DNA MER2_type 885 2418 0 195 24 119 0 chr2 195584598 195584640 -55103214 + A-rich Low_complexity Low_complexity 1 47 0 276 30 0 0 chr2 195584652 195584685 -55103169 + (A)n Simple_repeat Simple_repeat 1 33 0 475 254 8 25 chr2 195584688 195584810 -55103044 - MER58B DNA MER1_type -221 120 1 215 308 0 0 chr2 195585650 195585702 -55102152 + L2 LINE L2 3216 3267 -5 262 275 37 55 chr2 195585869 195585978 -55101876 - L2 LINE L2 -6 3307 3201 391 209 77 11 chr2 195586481 195586572 -55101282 + MIR3 SINE MIR 85 181 -27 447 278 100 33 chr2 195587075 195587316 -55100538 + L2 LINE L2 2986 3242 -71 639 230 128 31 chr2 195588344 195588540 -55099314 + MIR SINE MIR 40 254 -8 1257 221 32 49 chr2 195591745 195592089 -55095765 + L1ME3 LINE L1 5823 6160 -2 889 266 128 23 chr2 195592108 195592523 -55095331 + MLT1J LTR MaLR 24 510 -1 533 259 239 19 chr2 195592668 195592927 -55094927 + L1M4 LINE L1 4781 5096 -1050 685 221 7 13 chr2 195592948 195593102 -55094752 + L1ME3 LINE L1 6007 6159 -3 2116 121 24 0 chr2 195593530 195593828 -55094026 - AluSx SINE Alu -7 305 1 252 0 0 0 chr2 195597997 195598025 -55089829 + (TA)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 195599368 195599390 -55088464 + AT_rich Low_complexity Low_complexity 1 22 0 306 286 29 38 chr2 195599411 195599516 -55088338 + MIR SINE MIR 159 262 0 702 207 143 60 chr2 195599575 195599826 -55088028 - L1ME1 LINE L1 -18 6148 5877 375 285 51 36 chr2 195600540 195600677 -55087177 + L2 LINE L2 3133 3271 -1 1525 129 16 0 chr2 195602561 195602809 -55085045 + HERVH LTR ERV1 7462 7713 0 806 171 87 68 chr2 195602809 195603173 -55084681 + LTR7 LTR ERV1 1 412 -38 2370 82 0 0 chr2 195605499 195605790 -55082064 - AluSg SINE Alu -14 296 6 254 106 21 0 chr2 195606246 195606293 -55081561 + (CA)n Simple_repeat Simple_repeat 1 48 0 387 312 14 28 chr2 195606779 195606920 -55080934 - MIR3 SINE MIR -37 171 33 264 283 126 30 chr2 195607447 195607716 -55080138 + L1ME4a LINE L1 5654 5948 -173 2006 140 0 16 chr2 195607787 195608095 -55079759 - AluSx SINE Alu -9 303 1 228 182 68 0 chr2 195608901 195608945 -55078909 + MIR SINE MIR 205 251 -11 432 227 0 108 chr2 195610672 195610857 -55076997 + L2 LINE L2 3099 3263 -50 220 290 0 16 chr2 195611873 195611935 -55075919 - MIR SINE MIR -59 149 89 220 229 21 0 chr2 195611952 195612000 -55075854 - L2 LINE L2 0 3313 3265 412 201 43 92 chr2 195612212 195612376 -55075478 - L1MC5 LINE L1 -60 7901 7746 203 141 28 28 chr2 195613588 195613659 -55074195 + (TA)n Simple_repeat Simple_repeat 2 72 0 685 159 9 0 chr2 195614338 195614445 -55073409 + FLAM_C SINE Alu 4 111 -32 342 0 0 0 chr2 195614451 195614489 -55073365 + (CAA)n Simple_repeat Simple_repeat 1 38 0 301 293 264 6 chr2 195615002 195615169 -55072685 - MIR SINE MIR -18 244 35 292 196 108 10 chr2 195616936 195617038 -55070816 - MIR SINE MIR -34 228 117 186 43 0 0 chr2 195618883 195618906 -55068948 + (A)n Simple_repeat Simple_repeat 1 23 0 945 199 125 51 chr2 195619850 195620161 -55067693 - MLT1H LTR MaLR 0 549 216 522 266 116 17 chr2 195620349 195620522 -55067332 + MLT1H1 LTR MaLR 13 202 -353 460 238 48 54 chr2 195620904 195620941 -55066913 - L2 LINE L2 0 3313 3277 2161 110 0 0 chr2 195620941 195621264 -55066590 - AluSg SINE Alu 0 323 1 460 238 48 54 chr2 195621264 195621372 -55066482 - L2 LINE L2 -36 3277 3168 665 223 19 6 chr2 195621389 195621546 -55066308 - MIR SINE MIR -10 252 94 203 227 121 30 chr2 195621658 195621724 -55066130 - L2 LINE L2 -18 3254 3183 1733 157 18 7 chr2 195623331 195623634 -55064220 - AluSx SINE Alu 0 306 1 1868 157 0 10 chr2 195624011 195624311 -55063543 + AluSx SINE Alu 1 297 -15 2225 114 0 0 chr2 195624417 195624716 -55063138 + AluSx SINE Alu 1 299 -13 365 287 44 22 chr2 195624732 195624868 -55062986 - MIR SINE MIR 0 262 124 224 274 16 0 chr2 195625005 195625067 -55062787 + (TA)n Simple_repeat Simple_repeat 1 63 0 4501 107 161 30 chr2 195625132 195625569 -55062285 - Tigger3b DNA MER2_type -1798 1230 852 1691 167 3 10 chr2 195625569 195625868 -55061986 - AluJb SINE Alu -15 297 1 4501 107 161 30 chr2 195625868 195626269 -55061585 - Tigger3b DNA MER2_type -2176 852 282 2168 103 4 0 chr2 195626269 195626584 -55061270 + AluSx SINE Alu 1 316 0 539 259 21 0 chr2 195626584 195626727 -55061127 + MER115 DNA AcHobo 548 693 0 305 56 14 56 chr2 195626965 195627037 -55060817 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 1580 175 21 7 chr2 195627434 195627719 -55060135 + AluJb SINE Alu 10 298 -14 213 39 0 0 chr2 195628557 195628583 -55059271 + (T)n Simple_repeat Simple_repeat 1 26 0 237 132 0 0 chr2 195628761 195628799 -55059055 + (A)n Simple_repeat Simple_repeat 1 38 0 279 317 47 2 chr2 195629673 195629785 -55058069 - MIR SINE MIR -59 149 62 22 35 0 0 chr2 195629886 195629915 -55057939 + AT_rich Low_complexity Low_complexity 1 29 0 493 241 120 42 chr2 195630814 195631005 -55056849 - L2 LINE L2 -2 3311 3106 243 230 69 23 chr2 195631449 195631536 -55056318 + LTR16B LTR ERVL 59 149 -315 723 164 21 29 chr2 195631594 195631734 -55056120 - MER119 DNA MER1_type 0 583 445 473 252 63 8 chr2 195631722 195631849 -55056005 - MER119 DNA MER1_type -449 134 1 * 436 290 97 6 chr2 195631879 195632055 -55055799 + LTR16A LTR ERVL 259 450 0 309 312 93 33 chr2 195633130 195633537 -55054317 + L2 LINE L2 2782 3222 -50 198 0 0 0 chr2 195635155 195635177 -55052677 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 2357 99 0 0 chr2 195635200 195635493 -55052361 + AluSx SINE Alu 1 293 -19 398 68 0 17 chr2 195635932 195635991 -55051863 + (TC)n Simple_repeat Simple_repeat 1 58 0 931 255 85 45 chr2 195636014 195636468 -55051386 + MLT1J1 LTR MaLR 5 446 0 361 257 139 0 chr2 195636509 195636610 -55051244 - L2 LINE L2 -2 3270 3156 2788 111 58 24 chr2 195636837 195637251 -55050603 + MSTA LTR MaLR 1 428 0 474 279 86 0 chr2 195637559 195637699 -55050155 - MER69A DNA AcHobo -20 157 6 2319 94 3 3 chr2 195638135 195638442 -55049412 + AluSg1 SINE Alu 1 307 -2 1549 226 33 36 chr2 195639282 195639643 -55048211 + L1M4 LINE L1 4967 5328 -818 1969 81 21 11 chr2 195639643 195639926 -55047928 - AluSg SINE Alu -22 288 3 1549 226 33 36 chr2 195639926 195639985 -55047869 + L1M4 LINE L1 5328 5386 -760 3834 164 85 22 chr2 195640142 195640314 -55047540 + L1MB7 LINE L1 5324 5484 -700 2281 112 0 0 chr2 195640314 195640617 -55047237 + AluSq SINE Alu 1 303 -10 3834 164 85 22 chr2 195640617 195641253 -55046601 + L1MB7 LINE L1 5484 6183 -1 410 294 19 12 chr2 195641495 195641655 -55046199 - L2 LINE L2 0 3313 3153 267 221 29 0 chr2 195641811 195641879 -55045975 + MIR SINE MIR 183 252 -10 1930 126 14 3 chr2 195642211 195642496 -55045358 - L1PB1 LINE L1 -4 6147 5860 2259 103 3 3 chr2 195642498 195642800 -55045054 + AluSx SINE Alu 1 302 -10 530 243 37 69 chr2 195643444 195643521 -55044333 + MIR SINE MIR 78 156 -106 2381 90 3 0 chr2 195643521 195643820 -55044034 + AluSq SINE Alu 1 300 -13 530 243 37 69 chr2 195643820 195643931 -55043923 + MIR SINE MIR 156 260 -2 1973 155 0 13 chr2 195643941 195644245 -55043609 + AluJo SINE Alu 12 311 -1 1806 153 4 4 chr2 195644449 195644770 -55043084 - AluSx SINE Alu 0 321 1 387 0 0 0 chr2 195644853 195644896 -55042958 + (TGGA)n Simple_repeat Simple_repeat 2 44 0 428 322 0 9 chr2 195644983 195645098 -55042756 - L2 LINE L2 0 3313 3200 212 360 37 25 chr2 195645358 195645519 -55042335 - L3 LINE CR1 -7 1570 1408 378 184 0 0 chr2 195645823 195645899 -55041955 + (TG)n Simple_repeat Simple_repeat 2 77 0 193 298 0 135 chr2 195647647 195647686 -55040168 - L2 LINE L2 0 3272 3229 2391 80 7 0 chr2 195647686 195647986 -55039868 - AluSp SINE Alu -11 302 1 193 298 0 135 chr2 195647986 195648050 -55039804 - L2 LINE L2 -43 3229 3183 935 279 189 42 chr2 195648081 195648657 -55039197 - L2 LINE L2 -387 2927 2267 2330 94 7 0 chr2 195648657 195648966 -55038888 + AluSp SINE Alu 1 311 -2 189 0 0 0 chr2 195649656 195649677 -55038177 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 243 0 0 0 chr2 195649974 195650001 -55037853 + (CA)n Simple_repeat Simple_repeat 2 28 0 513 227 21 43 chr2 195650784 195650925 -55036929 + L2 LINE L2 3164 3301 -12 23 0 0 0 chr2 195651047 195651070 -55036784 + AT_rich Low_complexity Low_complexity 1 23 0 2231 123 0 0 chr2 195651155 195651464 -55036390 - AluSx SINE Alu -3 309 1 277 273 0 13 chr2 195652747 195652824 -55035030 - MIR SINE MIR -10 252 177 36 40 0 0 chr2 195652837 195652887 -55034967 + AT_rich Low_complexity Low_complexity 1 50 0 566 276 15 0 chr2 195652919 195653053 -55034801 - MIR SINE MIR -126 136 1 194 194 236 0 chr2 195653071 195653143 -55034711 - MIR SINE MIR -74 188 100 297 202 73 73 chr2 195653492 195653601 -55034253 + MER5A DNA MER1_type 57 165 -24 281 284 35 35 chr2 195653497 195653613 -55034241 - MER5A DNA MER1_type -50 139 24 * 296 95 0 48 chr2 195653737 195653800 -55034054 + (T)n Simple_repeat Simple_repeat 1 60 0 551 222 57 11 chr2 195753823 195753999 -54933855 - MER52A LTR ERV1 -986 769 586 367 373 80 20 chr2 195754062 195754362 -54933492 + L3 LINE CR1 909 1226 -351 337 58 72 0 chr2 195754482 195754551 -54933303 + (TA)n Simple_repeat Simple_repeat 2 75 0 3962 276 59 20 chr2 195754555 195756448 -54931406 + L1ME1 LINE L1 2394 4363 -2063 1157 261 26 16 chr2 195756588 195756971 -54930883 + L1ME1 LINE L1 4629 5015 -1411 644 321 164 42 chr2 195757767 195758530 -54929324 + L2 LINE L2 2038 2893 -421 1421 30 0 0 chr2 195759058 195759227 -54928627 - L1P2 LINE L1 -378 5777 5609 * 2118 31 0 12 chr2 195759225 195759482 -54928372 + L1P2 LINE L1 5350 5603 -552 24 0 0 0 chr2 195759698 195759722 -54928132 + AT_rich Low_complexity Low_complexity 1 24 0 3141 35 0 0 chr2 195760161 195760537 -54927317 + L1PA4 LINE L1 5776 6151 -4 321 357 79 7 chr2 195760556 195760696 -54927158 + MIR3 SINE MIR 18 167 -41 200 108 0 27 chr2 195761367 195761404 -54926450 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 7168 28 2 10 chr2 195761828 195762700 -54925154 + L1PA4 LINE L1 5285 6149 -6 1232 294 72 26 chr2 195762724 195763173 -54924681 + L1ME1 LINE L1 5728 6220 -226 1930 121 10 16 chr2 195763173 195763479 -54924375 - AluSx SINE Alu -8 304 1 1232 294 72 26 chr2 195763479 195763710 -54924144 + L1ME1 LINE L1 6220 6439 -7 1445 193 20 20 chr2 195763730 195764031 -54923823 + AluJo SINE Alu 1 301 -11 28 29 0 0 chr2 195764161 195764196 -54923658 + AT_rich Low_complexity Low_complexity 1 35 0 541 183 72 20 chr2 195764449 195764602 -54923252 + L1M4 LINE L1 4476 4636 -1510 1727 243 122 13 chr2 195764645 195765327 -54922527 - L1M4 LINE L1 -1084 5062 4307 1114 274 60 34 chr2 195765414 195765917 -54921937 + L1ME1 LINE L1 5647 6162 -4 21 0 0 0 chr2 195766146 195766167 -54921687 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 195767619 195767655 -54920199 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 195768958 195768979 -54918875 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 195769223 195769260 -54918594 + AT_rich Low_complexity Low_complexity 1 37 0 608 223 0 8 chr2 195769839 195769969 -54917885 + MER103 DNA DNA 13 141 -25 240 413 39 14 chr2 195770912 195771195 -54916659 + L2 LINE L2 2063 2352 -962 514 229 13 51 chr2 195771294 195771451 -54916403 - L2 LINE L2 -3 3310 3160 258 344 86 23 chr2 195771485 195771613 -54916241 - L2 LINE L2 -366 2948 2813 501 299 16 49 chr2 195771623 195771659 -54916195 + MER5B DNA MER1_type 1 37 -141 2666 85 6 0 chr2 195771659 195772012 -54915842 + THE1A LTR MaLR 1 355 0 501 299 16 49 chr2 195772012 195772159 -54915695 + MER5B DNA MER1_type 37 178 0 2499 286 136 28 chr2 195772163 195773163 -54914691 - L2 LINE L2 -507 2807 1640 1933 133 37 3 chr2 195773163 195773463 -54914391 + AluSx SINE Alu 1 310 -2 2499 286 136 28 chr2 195773463 195773726 -54914128 - L2 LINE L2 -1674 1640 1407 327 290 29 7 chr2 195774394 195774532 -54913322 - L2 LINE L2 -2488 826 686 1244 285 58 9 chr2 195774711 195775142 -54912712 - LTR40b LTR ERVL -10 452 1 23 0 0 0 chr2 195777084 195777107 -54910747 + AT_rich Low_complexity Low_complexity 1 23 0 1782 225 94 5 chr2 195777725 195778152 -54909702 + MLT1D LTR MaLR 41 505 0 511 157 19 0 chr2 195778160 195778268 -54909586 + GA-rich Low_complexity Low_complexity 3 112 0 21 0 0 0 chr2 195782879 195782900 -54904954 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 195783095 195783139 -54904715 + AT_rich Low_complexity Low_complexity 1 44 0 667 211 6 94 chr2 195783327 195783498 -54904356 + MER106B DNA MER1_type 1 156 -903 44 0 0 0 chr2 195783502 195783546 -54904308 + AT_rich Low_complexity Low_complexity 1 44 0 734 368 80 20 chr2 195783966 195784700 -54903154 - L3 LINE CR1 -445 1132 355 242 267 238 30 chr2 195785362 195785463 -54902391 + L2 LINE L2 3189 3310 -3 21 0 0 0 chr2 195785552 195785573 -54902281 + AT_rich Low_complexity Low_complexity 1 21 0 1129 237 108 34 chr2 195786625 195787087 -54900767 + MLT1F1 LTR MaLR 10 566 -1 381 243 9 65 chr2 195787509 195787616 -54900238 - L2 LINE L2 -23 3290 3190 333 297 51 36 chr2 195787722 195787860 -54899994 - L3 LINE CR1 -206 1371 1232 21 100 0 0 chr2 195789089 195789159 -54898695 + AT_rich Low_complexity Low_complexity 1 70 0 296 325 24 24 chr2 195789752 195789878 -54897976 - L3 LINE CR1 -5 1572 1447 2375 129 20 0 chr2 195789936 195790293 -54897561 + THE1B LTR MaLR 1 364 0 339 362 36 27 chr2 195790724 195790945 -54896909 - L2 LINE L2 -529 2785 2563 257 204 34 23 chr2 195791095 195791183 -54896671 + (TA)n Simple_repeat Simple_repeat 1 89 0 235 358 97 0 chr2 195791191 195791325 -54896529 - L3 LINE CR1 -334 1243 1097 25 31 0 0 chr2 195791903 195791935 -54895919 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr2 195792995 195793016 -54894838 + (TA)n Simple_repeat Simple_repeat 2 22 0 186 103 0 0 chr2 195793086 195793115 -54894739 + (TG)n Simple_repeat Simple_repeat 2 30 0 11131 31 0 1 chr2 195793304 195795417 -54892437 + L1PA2 LINE L1 4063 6175 0 41983 32 26 2 chr2 195795800 195800943 -54886911 - L1P LINE L1 -872 5274 4 199 333 0 0 chr2 195801366 195801426 -54886428 - MIR SINE MIR -64 144 85 328 340 77 30 chr2 195802055 195802290 -54885564 - MIR SINE MIR -15 247 2 21 36 0 0 chr2 195802821 195802849 -54885005 + AT_rich Low_complexity Low_complexity 1 28 0 1374 216 157 5 chr2 195802851 195803221 -54884633 - MSTB LTR MaLR 0 426 1 7450 159 80 36 chr2 195803246 195804753 -54883101 - MSTA-int LTR MaLR -2 1578 5 1785 147 132 26 chr2 195804757 195805144 -54882710 - MSTA LTR MaLR 0 428 1 216 0 0 0 chr2 195806345 195806369 -54881485 + (A)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr2 195806685 195806707 -54881147 + AT_rich Low_complexity Low_complexity 1 22 0 5946 210 84 14 chr2 195806743 195807617 -54880237 - L1 LINE L1 -1159 4987 3965 1866 180 0 0 chr2 195807617 195807912 -54879942 + AluSx SINE Alu 1 295 -17 5946 210 84 14 chr2 195807912 195808530 -54879324 - L1 LINE L1 -2181 3965 3391 3055 154 21 15 chr2 195808531 195809322 -54878532 + L1PB4 LINE L1 4996 5786 -370 1102 114 0 0 chr2 195809322 195809471 -54878383 + AluSq/x SINE Alu 1 149 -164 251 49 24 24 chr2 195809475 195809499 -54878355 - L1P5 LINE L1 -335 5816 5790 369 0 0 0 chr2 195809499 195809540 -54878314 + (TG)n Simple_repeat Simple_repeat 1 41 0 251 49 24 24 chr2 195809540 195809556 -54878298 - L1P5 LINE L1 -360 5791 5776 396 152 11 22 chr2 195809556 195809648 -54878206 + (TA)n Simple_repeat Simple_repeat 2 92 0 1372 165 23 0 chr2 195809749 195810009 -54877845 + L1PB4 LINE L1 5882 6147 -9 944 163 0 20 chr2 195810114 195810317 -54877537 - AluSg/x SINE Alu 0 333 134 1951 112 47 0 chr2 195810317 195810595 -54877259 - AluSx SINE Alu -21 291 1 479 351 104 33 chr2 195810750 195810816 -54877038 + L1MEd LINE L1 983 1043 -1447 369 0 0 0 chr2 195810816 195810857 -54876997 + (TG)n Simple_repeat Simple_repeat 2 42 0 479 351 104 33 chr2 195810857 195811132 -54876722 + L1MEd LINE L1 1043 1297 -1193 2156 123 7 0 chr2 195811132 195811433 -54876421 + AluSx SINE Alu 1 303 -9 479 351 104 33 chr2 195811433 195811714 -54876140 + L1MEd LINE L1 1297 1759 -731 300 250 97 56 chr2 195811943 195812159 -54875695 + L1MEd LINE L1 1952 2176 -4134 331 275 0 0 chr2 195812665 195812745 -54875109 + L1MB8 LINE L1 5436 5515 -651 762 153 80 0 chr2 195812746 195812883 -54874971 + MER20 DNA MER1_type 71 218 -1 21 0 0 0 chr2 195813461 195813482 -54874372 + AT_rich Low_complexity Low_complexity 1 21 0 711 239 29 45 chr2 195815197 195815440 -54872414 + L1MB8 LINE L1 5917 6155 -23 653 230 5 101 chr2 195815502 195815711 -54872143 - MIR SINE MIR -5 257 69 18489 98 24 21 chr2 195816596 195819272 -54868582 - Charlie3 DNA MER1_type -4 2706 24 1955 163 39 30 chr2 195819475 195819837 -54868017 - MLT1A1 LTR MaLR 0 365 1 2255 117 10 0 chr2 195820737 195821046 -54866808 + AluSx SINE Alu 1 312 0 30 77 0 0 chr2 195821289 195821354 -54866500 + AT_rich Low_complexity Low_complexity 1 65 0 273 278 106 46 chr2 195821992 195822143 -54865711 + MIR SINE MIR 47 206 -56 226 281 115 0 chr2 195822555 195822651 -54865203 + MIR3 SINE MIR 71 177 -31 21 0 0 0 chr2 195822779 195822800 -54865054 + AT_rich Low_complexity Low_complexity 1 21 0 238 207 0 61 chr2 195822800 195822882 -54864972 + L1MC4 LINE L1 6616 6692 -1350 438 320 105 66 chr2 195823379 195823788 -54864066 - L1ME LINE L1 -377 5744 5320 233 292 14 14 chr2 195824489 195824561 -54863293 + MIR SINE MIR 17 88 -174 823 199 66 0 chr2 195825150 195825316 -54862538 - MER45A DNA AcHobo 0 178 2 24 0 0 0 chr2 195825645 195825669 -54862185 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 195826237 195826258 -54861596 + AT_rich Low_complexity Low_complexity 1 21 0 617 322 105 21 chr2 195826345 195826676 -54861178 + LTR16A LTR ERVL 19 377 -73 1318 178 8 96 chr2 195826676 195827030 -54860824 - MER45B DNA AcHobo 0 1040 718 2024 172 8 8 chr2 195827030 195827390 -54860464 + MLT1A1 LTR MaLR 6 365 0 22 0 0 0 chr2 195831114 195831136 -54856718 + AT_rich Low_complexity Low_complexity 1 22 0 21 95 0 0 chr2 195831351 195831414 -54856440 + AT_rich Low_complexity Low_complexity 1 63 0 346 310 75 43 chr2 195831467 195831654 -54856200 - MIR SINE MIR -62 200 8 1329 197 61 29 chr2 195831933 195832046 -54855808 + AluJo SINE Alu 1 109 -203 594 0 0 0 chr2 195832046 195832112 -54855742 + (TAAAA)n Simple_repeat Simple_repeat 5 70 0 1329 197 61 29 chr2 195832112 195832277 -54855577 + AluJo SINE Alu 109 288 -24 324 408 83 9 chr2 195832846 195833074 -54854780 - MIR SINE MIR -7 255 11 524 227 33 7 chr2 195833146 195833296 -54854558 - MER103 DNA DNA -9 157 4 218 337 10 20 chr2 195834105 195834203 -54853651 + MER5A DNA MER1_type 4 100 -89 302 273 61 20 chr2 195834610 195834709 -54853145 + L2 LINE L2 2901 3003 -310 446 314 59 15 chr2 195835378 195835582 -54852272 + L2 LINE L2 3101 3313 0 202 271 71 14 chr2 195835593 195835663 -54852191 - MIR SINE MIR -155 107 34 999 177 62 0 chr2 195835798 195835990 -54851864 + MER3 DNA MER1_type 1 204 -5 23 33 0 0 chr2 195836322 195836352 -54851502 + AT_rich Low_complexity Low_complexity 1 30 0 577 293 128 23 chr2 195836908 195837174 -54850680 - L3b LINE CR1 -188 1395 1102 23 33 0 0 chr2 195840149 195840179 -54847675 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr2 195840305 195840325 -54847529 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr2 195841668 195841689 -54846165 + AT_rich Low_complexity Low_complexity 1 21 0 2007 107 7 3 chr2 195841689 195841989 -54845865 - AluSc SINE Alu -8 301 1 25 0 0 0 chr2 195843193 195843218 -54844636 + AT_rich Low_complexity Low_complexity 1 25 0 2844 46 0 0 chr2 195843218 195843563 -54844291 - L1PA4 LINE L1 -8 6147 5803 642 199 137 19 chr2 195843858 195844019 -54843835 - MER58A DNA MER1_type 0 224 45 699 210 76 13 chr2 195845176 195845333 -54842521 - AluJb SINE Alu -21 291 125 445 308 8 0 chr2 195845547 195845664 -54842190 + MLT1K LTR MaLR 180 297 -291 275 209 15 15 chr2 195845839 195845906 -54841948 + MLT1K LTR MaLR 522 588 0 24 0 0 0 chr2 195845995 195846019 -54841835 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 195846155 195846176 -54841678 + AT_rich Low_complexity Low_complexity 1 21 0 2746 0 0 16 chr2 195846286 195846595 -54841259 + AluYa5 SINE Alu 1 304 -7 1715 149 38 0 chr2 195846602 195846890 -54840964 + AluSx SINE Alu 1 299 -13 288 0 0 0 chr2 195846891 195846923 -54840931 + (CA)n Simple_repeat Simple_repeat 2 33 0 462 363 53 4 chr2 195847897 195848123 -54839731 - MIR SINE MIR -12 250 14 4370 206 95 32 chr2 195848507 195849923 -54837931 + Charlie5 DNA MER1_type 1 1505 -1107 2385 203 21 12 chr2 195849930 195850496 -54837358 + Charlie5 DNA MER1_type 1616 2186 -426 279 203 109 43 chr2 195850490 195850628 -54837226 + Charlie5 DNA MER1_type 2477 2623 0 * 1119 93 6 16 chr2 195851697 195851879 -54835975 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1881 221 92 133 chr2 195853885 195855714 -54832140 - MER52A LTR ERV1 0 1755 1 623 248 96 10 chr2 195856527 195856725 -54831129 + MIR SINE MIR 48 262 0 1479 199 40 31 chr2 195856745 195857096 -54830758 - MLT1A1 LTR MaLR -11 354 1 409 311 28 0 chr2 195858756 195858862 -54828992 - MER81 DNA DNA -5 109 1 313 340 78 22 chr2 195859229 195859461 -54828393 + MIR SINE MIR 17 261 -1 191 267 56 111 chr2 195859463 195859643 -54828211 - MIR SINE MIR -65 197 28 1515 168 0 32 chr2 195860044 195860329 -54827525 - AluJb SINE Alu -36 276 1 1689 156 18 7 chr2 195860844 195861119 -54826735 + AluJb SINE Alu 22 299 -13 2182 213 29 47 chr2 195861218 195861718 -54826136 + MLT2B1 LTR ERVL 3 445 -19 273 98 0 0 chr2 195861735 195861776 -54826078 + (CA)n Simple_repeat Simple_repeat 2 42 0 279 170 0 0 chr2 195861846 195861893 -54825961 + MLT2B1 LTR ERVL 472 518 -2 311 189 44 78 chr2 195862125 195862215 -54825639 - L1MC4 LINE L1 -1344 6698 6612 698 120 16 38 chr2 195862224 195862407 -54825447 + (TA)n Simple_repeat Simple_repeat 2 180 0 264 340 32 32 chr2 195862922 195863107 -54824747 - MIR SINE MIR 0 262 78 24 32 0 0 chr2 195863249 195863280 -54824574 + AT_rich Low_complexity Low_complexity 1 31 0 421 269 106 51 chr2 195863343 195863599 -54824255 + L1MD3 LINE L1 369 638 -5432 2565 262 78 25 chr2 195863645 195865043 -54822811 + L1MD3 LINE L1 716 2189 -3891 1333 288 138 12 chr2 195865058 195865544 -54822310 + MLT1E LTR MaLR 1 547 -46 4764 232 74 53 chr2 195865557 195865592 -54822262 + L1MD3 LINE L1 3411 3444 -2636 1723 169 23 29 chr2 195865592 195865942 -54821912 + L1MC1 LINE L1 5986 6333 0 4764 232 74 53 chr2 195865942 195866343 -54821511 + L1MD3 LINE L1 3444 3835 -2245 403 99 0 132 chr2 195866343 195866434 -54821420 + MADE1 DNA Mariner 1 79 -1 4764 232 74 53 chr2 195866434 195868588 -54819266 + L1MD3 LINE L1 3835 5337 -743 258 81 0 0 chr2 195869814 195869851 -54818003 + (TG)n Simple_repeat Simple_repeat 2 38 0 780 231 11 48 chr2 195870052 195870238 -54817616 + MLT2D LTR ERVL 234 412 -2 21 36 0 0 chr2 195870446 195870474 -54817380 + AT_rich Low_complexity Low_complexity 1 28 0 288 381 40 23 chr2 195870789 195870965 -54816889 - L3b LINE CR1 -48 1535 1357 332 303 76 78 chr2 195873429 195873812 -54814042 + HAL1b LINE L1 16 397 -951 5703 194 43 23 chr2 195874235 195876327 -54811527 - L1MC1 LINE L1 -20 6593 4463 6875 187 56 34 chr2 195876335 195878720 -54809134 - L1MC1 LINE L1 -3868 2558 27 884 119 0 0 chr2 195879306 195879479 -54808375 + AluSg/x SINE Alu 156 328 0 25 0 0 0 chr2 195879521 195879546 -54808308 + AT_rich Low_complexity Low_complexity 1 25 0 487 322 17 21 chr2 195880180 195880413 -54807441 - HAL1 LINE L1 -204 2303 2072 730 290 119 26 chr2 195880834 195881179 -54806675 - LTR16C LTR ERVL 0 491 115 194 105 26 0 chr2 195881708 195881746 -54806108 + T-rich Low_complexity Low_complexity 2 40 0 2107 101 14 0 chr2 195881786 195882072 -54805782 - AluSx SINE Alu -19 293 4 270 0 0 0 chr2 195882589 195882619 -54805235 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 381 227 21 10 chr2 195883219 195883316 -54804538 + MER5A DNA MER1_type 9 106 -83 33 0 0 0 chr2 195883900 195883933 -54803921 + AT_rich Low_complexity Low_complexity 1 33 0 1207 184 0 51 chr2 195884080 195884311 -54803543 - MSTC LTR MaLR -4 424 206 1733 172 0 23 chr2 195884311 195884614 -54803240 - AluJo SINE Alu -6 306 11 1207 184 0 51 chr2 195884614 195884637 -54803217 - MSTC LTR MaLR -222 206 183 432 244 0 50 chr2 195884673 195884754 -54803100 + L1MD2 LINE L1 6044 6119 -240 1577 158 103 29 chr2 195884754 195885103 -54802751 - THE1C LTR MaLR 0 375 1 432 244 0 50 chr2 195885103 195885140 -54802714 + L1MD2 LINE L1 6119 6156 -203 709 181 127 18 chr2 195885140 195885306 -54802548 - MSTC LTR MaLR -244 184 1 2827 200 69 19 chr2 195885535 195886176 -54801678 - L1MD2 LINE L1 -32 6327 5655 201 154 0 0 chr2 195886655 195886694 -54801160 + (TATG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr2 195886781 195886809 -54801045 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 195886989 195887013 -54800841 + AT_rich Low_complexity Low_complexity 1 24 0 245 125 0 21 chr2 195887013 195887061 -54800793 + (GA)n Simple_repeat Simple_repeat 2 48 0 250 256 13 26 chr2 195888388 195888466 -54799388 + (TA)n Simple_repeat Simple_repeat 2 78 0 23 0 0 0 chr2 195891129 195891152 -54796702 + AT_rich Low_complexity Low_complexity 1 23 0 56 55 0 0 chr2 195891468 195891559 -54796295 + AT_rich Low_complexity Low_complexity 1 91 0 180 111 0 0 chr2 195891965 195891992 -54795862 + (CA)n Simple_repeat Simple_repeat 1 27 0 1097 325 40 22 chr2 195892504 195893082 -54794772 + L2 LINE L2 2722 3311 -2 282 341 71 88 chr2 195893089 195893453 -54794401 - L2 LINE L2 0 3272 2915 743 346 74 19 chr2 195893476 195894068 -54793786 - L2 LINE L2 -1019 2295 1671 11299 31 1 2 chr2 195894250 195896383 -54791471 + L1PA3 LINE L1 4038 6155 0 26 0 0 0 chr2 195896910 195896936 -54790918 + AT_rich Low_complexity Low_complexity 1 26 0 27 0 0 0 chr2 195898196 195898223 -54789631 + AT_rich Low_complexity Low_complexity 1 27 0 261 88 123 35 chr2 195899051 195899108 -54788746 - MLT1B LTR MaLR -328 62 1 477 312 53 7 chr2 195899131 195899416 -54788438 - L1ME4a LINE L1 -281 5840 5543 408 239 11 0 chr2 195899878 195899966 -54787888 - MIR SINE MIR -88 120 32 427 252 119 21 chr2 195900643 195900786 -54787068 - MIR SINE MIR -71 191 35 224 302 22 67 chr2 195901357 195901538 -54786316 - MER5A DNA MER1_type -1 188 7 23 33 0 0 chr2 195902754 195902784 -54785070 + AT_rich Low_complexity Low_complexity 1 30 0 513 266 68 119 chr2 195905195 195905664 -54782190 + LTR33A LTR ERVL 7 451 -72 989 327 56 10 chr2 195905699 195906109 -54781745 + LTR16B LTR ERVL 36 464 0 1515 204 86 30 chr2 195906303 195906700 -54781154 - LTR52 LTR ERVL -2 419 1 274 274 88 0 chr2 195906739 195906841 -54781013 + MER103 DNA DNA 55 165 -1 268 306 0 47 chr2 195907993 195908078 -54779776 - L2 LINE L2 -4 3268 3188 220 295 62 45 chr2 195908511 195908623 -54779231 + MIR SINE MIR 93 206 -56 225 0 0 0 chr2 195911566 195911591 -54776263 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 38 0 0 0 chr2 195912183 195912221 -54775633 + AT_rich Low_complexity Low_complexity 1 38 0 407 163 12 0 chr2 195912355 195912435 -54775419 + CT-rich Low_complexity Low_complexity 1 81 0 23 33 0 0 chr2 195915040 195915070 -54772784 + AT_rich Low_complexity Low_complexity 1 30 0 1501 92 35 4 chr2 195915318 195915545 -54772309 + L1PA13 LINE L1 5927 6160 -3 21 0 0 0 chr2 195916011 195916032 -54771822 + AT_rich Low_complexity Low_complexity 1 21 0 246 328 177 0 chr2 195916161 195916347 -54771507 - MIR SINE MIR -7 255 37 277 218 99 30 chr2 195916921 195917022 -54770832 - MIR SINE MIR -85 177 70 183 409 0 0 chr2 195917137 195917208 -54770646 + MER5B DNA MER1_type 63 133 -45 6835 66 4 0 chr2 195917333 195918920 -54768934 - L1PA6 LINE L1 -2 6152 4562 4571 68 2 0 chr2 195918956 195919555 -54768299 - L1PA6 LINE L1 -1721 4425 3826 2328 62 0 0 chr2 195919553 195919845 -54768009 + L1P LINE L1 3368 3659 -2487 * 686 169 39 0 chr2 195919846 195919976 -54767878 - L1MB2 LINE L1 -43 6128 5994 226 160 0 40 chr2 195919987 195920037 -54767817 - L1MC4 LINE L1 -1 8041 7994 2970 266 61 20 chr2 195920081 195920404 -54767450 - L1MC4 LINE L1 -127 7681 7373 2181 117 45 31 chr2 195920404 195920762 -54767092 - THE1B LTR MaLR -1 363 1 2970 266 61 20 chr2 195920762 195921670 -54766184 - L1MC4 LINE L1 -435 7373 6484 207 207 11 35 chr2 195921858 195921945 -54765909 + GA-rich Low_complexity Low_complexity 4 88 0 2081 128 3 0 chr2 195921960 195922258 -54765596 - AluSx SINE Alu -13 299 1 23 0 0 0 chr2 195922763 195922786 -54765068 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 195922909 195922939 -54764915 + AT_rich Low_complexity Low_complexity 1 30 0 615 280 97 25 chr2 195923284 195923563 -54764291 + L1ME3A LINE L1 5867 6165 -5 3085 171 27 5 chr2 195925403 195926042 -54761812 - L1 LINE L1 -1259 4887 4235 249 300 154 9 chr2 195926203 195926313 -54761541 + L2 LINE L2 3173 3298 -15 351 293 0 19 chr2 195926383 195926489 -54761365 - LTR33 LTR ERVL -7 514 411 588 298 99 19 chr2 195926533 195926855 -54760999 - LTR33 LTR ERVL -173 348 1 729 255 68 69 chr2 195926999 195927727 -54760127 + L1MC5 LINE L1 7271 7907 -54 21 89 0 0 chr2 195928153 195928209 -54759645 + AT_rich Low_complexity Low_complexity 1 56 0 624 305 78 62 chr2 195928384 195929388 -54758466 - L1M4 LINE L1 -1305 4841 3821 1491 278 77 56 chr2 195929568 195930322 -54757532 - L1M4c LINE L1 -4431 2707 1798 2521 68 0 0 chr2 195930322 195930632 -54757222 - AluY SINE Alu -1 310 1 1491 278 77 56 chr2 195930632 195931060 -54756794 - L1M4c LINE L1 -5340 1798 1380 280 336 36 7 chr2 195931227 195931364 -54756490 - L1M4c LINE L1 -5667 1188 1048 251 278 67 56 chr2 195931677 195931857 -54755997 - L1M4c LINE L1 -6586 273 92 255 316 12 99 chr2 195932691 195932862 -54754992 - MIR SINE MIR 0 262 107 692 84 0 37 chr2 195933064 195933171 -54754683 + L1PA10 LINE L1 6066 6168 0 249 200 17 142 chr2 195933480 195933600 -54754254 + L1MC4 LINE L1 7403 7507 -535 439 285 74 67 chr2 195933600 195934031 -54753823 + L1MC5 LINE L1 7346 7779 -182 209 227 0 0 chr2 195934218 195934262 -54753592 + T-rich Low_complexity Low_complexity 1 44 0 30 59 0 0 chr2 195934786 195934837 -54753017 + AT_rich Low_complexity Low_complexity 1 51 0 281 308 68 26 chr2 195935083 195935200 -54752654 + MIR3 SINE MIR 59 180 -28 230 206 27 55 chr2 195935217 195935290 -54752564 - MIR SINE MIR -106 156 86 1244 116 87 170 chr2 195935635 195935777 -54752077 - MER44D DNA MER2_type -1882 609 457 306 73 0 0 chr2 195935777 195935818 -54752036 + (TA)n Simple_repeat Simple_repeat 2 42 0 1244 116 87 170 chr2 195935818 195936045 -54751809 - MER44D DNA MER2_type -2034 457 1 498 306 14 16 chr2 195936771 195936997 -54750857 - MIR SINE MIR -6 256 33 630 260 128 10 chr2 195937963 195938159 -54749695 - MIR SINE MIR 0 262 44 2534 64 0 0 chr2 195938216 195938527 -54749327 + AluY SINE Alu 1 311 0 261 137 20 59 chr2 195939845 195939896 -54747958 - L2 LINE L2 -9 3304 3256 2209 69 0 3 chr2 195941934 195942224 -54745630 + AluY SINE Alu 1 289 -22 22 0 0 0 chr2 195943181 195943203 -54744651 + AT_rich Low_complexity Low_complexity 1 22 0 183 100 0 0 chr2 195944641 195944671 -54743183 + (TG)n Simple_repeat Simple_repeat 2 31 0 1196 87 5 92 chr2 195946008 195946204 -54741650 + AluY SINE Alu 2 180 -131 204 97 0 0 chr2 195946337 195946368 -54741486 + (TG)n Simple_repeat Simple_repeat 1 31 0 198 103 0 0 chr2 195946374 195946403 -54741451 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 1260 95 0 0 chr2 195946598 195946766 -54741088 + AluY SINE Alu 141 308 -3 5530 187 256 20 chr2 195947363 195948782 -54739072 + MER52A LTR ERV1 1 1755 0 270 222 0 16 chr2 195949462 195949525 -54738329 + (TG)n Simple_repeat Simple_repeat 1 62 0 430 338 13 26 chr2 195949560 195949714 -54738140 + MIR SINE MIR 2 153 -109 1678 230 68 22 chr2 195950953 195951409 -54736445 + MLT2B1 LTR ERVL 1 477 -43 668 132 0 16 chr2 195951409 195951530 -54736324 + (TCTA)n Simple_repeat Simple_repeat 3 121 0 33 0 0 0 chr2 195951558 195951591 -54736263 + AT_rich Low_complexity Low_complexity 1 33 0 24 32 0 0 chr2 195952560 195952591 -54735263 + AT_rich Low_complexity Low_complexity 1 31 0 227 252 14 21 chr2 195952637 195952729 -54735125 + A-rich Low_complexity Low_complexity 1 138 0 22 0 0 0 chr2 195954115 195954137 -54733717 + AT_rich Low_complexity Low_complexity 1 22 0 1856 158 65 8 chr2 195954227 195954582 -54733272 + THE1C LTR MaLR 1 375 0 2354 72 3 7 chr2 195954725 195955031 -54732823 + AluY SINE Alu 1 305 -6 217 313 15 0 chr2 195955048 195955115 -54732739 + MIR SINE MIR 117 184 -78 29 0 0 0 chr2 195955235 195955264 -54732590 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 195955310 195955334 -54732520 + AT_rich Low_complexity Low_complexity 1 24 0 212 111 0 44 chr2 195955920 195955965 -54731889 + (TTTTG)n Simple_repeat Simple_repeat 1 43 0 25 75 0 0 chr2 195956366 195956419 -54731435 + AT_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr2 195957366 195957388 -54730466 + AT_rich Low_complexity Low_complexity 1 22 0 376 291 51 11 chr2 195957645 195957820 -54730034 - MIR SINE MIR -60 202 21 1541 210 7 0 chr2 195958434 195958739 -54729115 - AluJo SINE Alu 0 312 6 1280 227 44 78 chr2 195959223 195959461 -54728393 + LTR52 LTR ERVL 1 220 -201 1966 68 44 0 chr2 195959461 195959761 -54728093 - AluY SINE Alu 0 331 21 1280 227 44 78 chr2 195959761 195959957 -54727897 + LTR52 LTR ERVL 220 421 0 21 0 0 0 chr2 195960235 195960256 -54727598 + AT_rich Low_complexity Low_complexity 1 21 0 185 109 73 0 chr2 195960946 195961001 -54726853 + (TA)n Simple_repeat Simple_repeat 2 60 0 1367 186 12 107 chr2 195961418 195961821 -54726033 - MLT1A1 LTR MaLR 0 365 1 213 163 0 0 chr2 195962608 195962657 -54725197 + A-rich Low_complexity Low_complexity 1 49 0 9021 31 15 1 chr2 195962913 195964285 -54723569 - L1P2 LINE L1 -487 5668 4280 896 214 41 34 chr2 195964285 195964552 -54723302 + LTR37A LTR ERV1 157 425 -1 1473 205 0 14 chr2 195965546 195965829 -54722025 - AluJo SINE Alu -22 290 12 423 378 100 11 chr2 195966573 195966753 -54721101 + MER91A DNA MER1_type 1 196 0 21 36 0 0 chr2 195967673 195967701 -54720153 + AT_rich Low_complexity Low_complexity 1 28 0 344 111 0 49 chr2 195968134 195968215 -54719639 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 182 170 0 21 chr2 195968212 195968259 -54719595 + CT-rich Low_complexity Low_complexity 3 48 0 * 445 308 12 35 chr2 195968603 195968772 -54719082 + MIR3 SINE MIR 3 167 -41 423 316 123 57 chr2 195969924 195970387 -54717467 - L1ME3A LINE L1 -264 5906 5475 201 39 0 0 chr2 195970387 195970413 -54717441 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1452 218 0 0 chr2 195970418 195970693 -54717161 - AluJo SINE Alu -37 275 1 423 316 123 57 chr2 195970693 195970743 -54717111 - L1ME3A LINE L1 -698 5472 5348 33 43 0 0 chr2 195972351 195972398 -54715456 + AT_rich Low_complexity Low_complexity 1 47 0 22 94 0 0 chr2 195972441 195972505 -54715349 + AT_rich Low_complexity Low_complexity 1 64 0 354 138 0 0 chr2 195973863 195973921 -54713933 + (TTCC)n Simple_repeat Simple_repeat 2 59 0 245 178 44 22 chr2 195974554 195974644 -54713210 + (TA)n Simple_repeat Simple_repeat 2 93 0 237 317 99 21 chr2 195974762 195974904 -54712950 + MLT1G1 LTR MaLR 166 318 -277 490 71 24 0 chr2 195975082 195975166 -54712688 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 262 240 29 10 chr2 195975423 195975527 -54712327 - L1 LINE L1 -1126 5020 4915 226 374 9 17 chr2 195975952 195976067 -54711787 + L3 LINE CR1 1453 1566 -11 230 348 51 0 chr2 195976080 195976218 -54711636 + MIR SINE MIR 37 181 -81 511 333 157 14 chr2 195978034 195978448 -54709406 + L2 LINE L2 2839 3311 -2 1897 147 24 37 chr2 195979588 195979968 -54707886 + THE1C LTR MaLR 1 375 0 2443 74 3 0 chr2 195980358 195980655 -54707199 + AluSp SINE Alu 2 299 -14 1407 106 76 4 chr2 195980720 195980834 -54707020 - L1MA5A LINE L1 -5 6292 6188 420 20 0 0 chr2 195980834 195980883 -54706971 + (TG)n Simple_repeat Simple_repeat 2 50 0 1407 106 76 4 chr2 195980883 195981005 -54706849 - L1MA5A LINE L1 -109 6188 6039 2439 91 0 0 chr2 195983757 195984066 -54703788 + AluY SINE Alu 3 311 0 760 221 0 0 chr2 195985685 195985880 -54701974 + L1MA9 LINE L1 1710 1904 -4945 4064 248 14 43 chr2 195985894 195986890 -54700964 + L1PA13 LINE L1 1 967 -5820 781 186 5 234 chr2 195986944 195987035 -54700819 + L1PA13 LINE L1 2531 2641 -4156 5818 58 1 3 chr2 195987035 195987766 -54700088 + L1PA7 LINE L1 5406 6135 -19 781 186 5 234 chr2 195987766 195988239 -54699615 + L1PA13 LINE L1 2641 2966 -3831 391 35 17 17 chr2 195988329 195988387 -54699467 + (CA)n Simple_repeat Simple_repeat 2 59 0 553 130 0 0 chr2 195988458 195988550 -54699304 - L1MA1 LINE L1 0 6302 6211 4594 185 28 19 chr2 195988613 195990211 -54697643 + L1MA9 LINE L1 5275 6874 -140 216 214 0 0 chr2 195990531 195990587 -54697267 + (TA)n Simple_repeat Simple_repeat 2 57 0 538 331 137 15 chr2 195990918 195991326 -54696528 + L1ME4a LINE L1 5660 6117 -4 26 0 0 0 chr2 195991539 195991565 -54696289 + AT_rich Low_complexity Low_complexity 1 26 0 1382 140 21 8 chr2 195992201 195992444 -54695410 - L1MA8 LINE L1 -270 6021 5776 403 126 6 75 chr2 195992467 195992641 -54695213 + (TA)n Simple_repeat Simple_repeat 2 163 0 360 0 0 0 chr2 195992772 195992812 -54695042 + (TA)n Simple_repeat Simple_repeat 1 40 0 * 498 17 0 0 chr2 195992811 195992870 -54694984 + (GA)n Simple_repeat Simple_repeat 2 60 0 2144 92 0 7 chr2 195992870 195993151 -54694703 - AluSq SINE Alu -34 279 1 429 217 0 0 chr2 195993151 195993243 -54694611 - L1MA8 LINE L1 -515 5785 5694 497 194 8 90 chr2 195993248 195993382 -54694472 + L1MA8 LINE L1 5987 6109 -182 701 214 28 14 chr2 195993383 195993528 -54694326 - FAM SINE Alu -20 165 19 925 152 34 0 chr2 195993532 195993710 -54694144 + L1MA8 LINE L1 6106 6289 -2 3009 96 13 65 chr2 195993909 195994387 -54693467 - MLT2A2 LTR ERVL 0 453 1 2246 139 58 41 chr2 195996585 195997105 -54690749 + MLT2A2 LTR ERVL 1 554 0 460 276 68 41 chr2 195997299 195997520 -54690334 + MLT1J2 LTR MaLR 3 229 -221 204 255 0 0 chr2 195998583 195998630 -54689224 - MIR SINE MIR 0 262 216 570 172 8 8 chr2 196000396 196000518 -54687336 - L1 LINE L1 -1565 4581 4460 212 171 0 0 chr2 196000522 196000563 -54687291 + T-rich Low_complexity Low_complexity 1 41 0 462 321 61 0 chr2 196000964 196001160 -54686694 - MER90 LTR ERV1 -66 548 341 738 181 114 0 chr2 196001748 196001897 -54685957 - FRAM SINE Alu -12 164 1 22 35 0 0 chr2 196003377 196003406 -54684448 + AT_rich Low_complexity Low_complexity 1 29 0 287 298 121 68 chr2 196004662 196004910 -54682944 + L2 LINE L2 2434 2694 -620 203 152 0 0 chr2 196004921 196004954 -54682900 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 1873 161 24 30 chr2 196004955 196005327 -54682527 + Tigger2a DNA MER2_type 1 370 -64 20003 172 21 27 chr2 196005337 196008464 -54679390 + L1MA3 LINE L1 17 3109 -4456 2182 110 0 3 chr2 196008464 196008756 -54679098 + AluSq SINE Alu 2 292 -21 20003 172 21 27 chr2 196008756 196009774 -54678080 + L1MA3 LINE L1 3109 4132 -3433 1261 180 0 0 chr2 196009784 196010017 -54677837 + L1MA3 LINE L1 6058 6290 -1275 1864 193 46 32 chr2 196010017 196010560 -54677294 - MLT2A2 LTR ERVL 0 554 1 1602 219 6 0 chr2 196010564 196010920 -54676934 + L1MA3 LINE L1 6290 6647 -918 795 216 57 0 chr2 196010920 196011096 -54676758 + MSTB LTR MaLR 241 426 0 7905 195 29 29 chr2 196011096 196011559 -54676295 + MSTA-int LTR MaLR 1 463 -1188 1912 131 7 7 chr2 196011559 196011842 -54676012 + AluSq SINE Alu 1 283 -30 7905 195 29 29 chr2 196011842 196013029 -54674825 + MSTA-int LTR MaLR 462 1651 0 2255 167 36 0 chr2 196013029 196013442 -54674412 + MSTA LTR MaLR 1 428 0 5516 138 44 32 chr2 196013442 196014500 -54673354 + L1MA3 LINE L1 6654 7724 0 246 338 0 0 chr2 196014509 196014580 -54673274 + Tigger2a DNA MER2_type 374 444 0 192 40 0 0 chr2 196014593 196014618 -54673236 + (CA)n Simple_repeat Simple_repeat 2 26 0 225 0 0 0 chr2 196014682 196014707 -54673147 + (TG)n Simple_repeat Simple_repeat 2 26 0 313 282 24 0 chr2 196014720 196014805 -54673049 + L2 LINE L2 2734 2820 -494 566 208 63 1 chr2 196015485 196015745 -54672109 - ERVL LTR ERVL -243 5521 5211 466 312 6 12 chr2 196015982 196016152 -54671702 - L1MC4 LINE L1 -549 7493 7325 253 234 13 0 chr2 196016152 196016229 -54671625 + (TA)n Simple_repeat Simple_repeat 2 79 0 322 328 151 0 chr2 196016264 196016450 -54671404 - L1MC4 LINE L1 -731 7311 7098 652 272 50 91 chr2 196016589 196017005 -54670849 - L1MC4 LINE L1 -966 7076 6678 2401 87 0 0 chr2 196017161 196017470 -54670384 + AluY SINE Alu 1 309 -2 2212 133 11 11 chr2 196017757 196018111 -54669743 + THE1A LTR MaLR 1 354 -1 10496 110 18 23 chr2 196018112 196019701 -54668153 + THE1A-int LTR MaLR 1 1580 0 2259 122 11 8 chr2 196019702 196020054 -54667800 + THE1A LTR MaLR 3 355 0 317 237 54 0 chr2 196020264 196020357 -54667497 + MLT1B LTR MaLR 2 99 -291 1845 224 42 42 chr2 196020359 196020903 -54666951 + L1 LINE L1 4564 5107 -1039 2020 135 44 36 chr2 196020903 196021084 -54666770 + THE1C LTR MaLR 3 181 -194 4269 73 45 0 chr2 196021084 196021644 -54666210 + LTR14C LTR ERVK 2 586 -1 2020 135 44 36 chr2 196021644 196021825 -54666029 + THE1C LTR MaLR 181 368 -7 916 141 0 6 chr2 196021826 196021982 -54665872 + THE1C-int LTR MaLR 1 155 -1425 635 51 13 0 chr2 196022011 196022090 -54665764 + THE1-int LTR MaLR 1397 1476 -104 2910 100 13 0 chr2 196022098 196022487 -54665367 - MLT2A2 LTR ERVL -59 394 1 13145 73 36 44 chr2 196022487 196024361 -54663493 - HERVL-A2 LTR ERVL 0 5654 3795 2725 17 0 0 chr2 196024384 196024684 -54663170 + AluYa5 SINE Alu 11 310 -1 3943 154 22 5 chr2 196024671 196025338 -54662516 + L1PA16 LINE L1 5484 6162 -4 3000 102 51 0 chr2 196025395 196025780 -54662074 + MLT2A2 LTR ERVL 1 365 -88 342 0 0 0 chr2 196025780 196025818 -54662036 + (TC)n Simple_repeat Simple_repeat 2 39 0 342 0 0 0 chr2 196025817 196025855 -54661999 + (TA)n Simple_repeat Simple_repeat 1 38 0 3000 102 51 0 chr2 196025818 196025900 -54661954 + MLT2A2 LTR ERVL 365 453 0 1601 83 9 0 chr2 196025900 196026116 -54661738 + HERVL-A2 LTR ERVL 1 218 -5436 855 256 8 8 chr2 196026117 196026383 -54661471 - L1PA15-16 LINE L1 -4706 2143 1878 2025 119 10 7 chr2 196026782 196026945 -54660909 - AluSx SINE Alu -17 295 129 207 0 0 0 chr2 196026945 196026968 -54660886 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2025 119 10 7 chr2 196026968 196027098 -54660756 - AluSx SINE Alu -183 129 1 2070 121 10 3 chr2 196027447 196027745 -54660109 + AluSq SINE Alu 1 300 -13 619 123 9 0 chr2 196028612 196028726 -54659128 - L1MA7 LINE L1 -1 6290 6176 2189 162 6 6 chr2 196029607 196029972 -54657882 + MLT1A1 LTR MaLR 1 365 0 21 36 0 0 chr2 196031425 196031453 -54656401 + AT_rich Low_complexity Low_complexity 1 28 0 201 121 0 0 chr2 196031784 196031817 -54656037 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 204 97 0 0 chr2 196031819 196031850 -54656004 + (CA)n Simple_repeat Simple_repeat 1 31 0 543 273 0 20 chr2 196032315 196032465 -54655389 - MER58B DNA MER1_type -2 339 193 318 26 0 0 chr2 196032469 196032508 -54655346 + (CA)n Simple_repeat Simple_repeat 1 39 0 207 325 48 56 chr2 196032516 196032529 -54655325 - L2 LINE L2 -33 3239 3227 2077 158 9 6 chr2 196032529 196032871 -54654983 + MER61A LTR ERV1 1 343 0 207 325 48 56 chr2 196032871 196032983 -54654871 - L2 LINE L2 -45 3227 3115 581 347 60 13 chr2 196033272 196033655 -54654199 - MLT1I LTR MaLR -3 406 6 333 0 0 0 chr2 196033819 196033856 -54653998 + (CAA)n Simple_repeat Simple_repeat 2 38 0 1227 232 121 94 chr2 196033904 196034835 -54653019 + LTR1B LTR ERV1 1 1020 0 300 305 62 23 chr2 196088169 196088346 -54599508 + HAL1 LINE L1 203 386 -2121 456 292 0 0 chr2 196088350 196088470 -54599384 + L2 LINE L2 3194 3313 0 8063 97 7 6 chr2 196088813 196090039 -54597815 + HERVH LTR ERV1 1760 2987 -4726 745 144 41 7 chr2 196090033 196090179 -54597675 + HERVH LTR ERV1 3140 3290 -4423 * 3240 98 4 6 chr2 196090169 196090668 -54597186 + HERVH LTR ERV1 3492 3989 -3724 * 3981 162 0 1 chr2 196090663 196091336 -54596518 + HERVH LTR ERV1 4478 5149 -2564 1246 144 23 0 chr2 196091337 196091552 -54596302 + HERVH LTR ERV1 5600 5819 -1894 376 150 0 0 chr2 196091552 196091612 -54596242 + HERVH LTR ERV1 7324 7383 -330 1849 110 52 15 chr2 196091712 196092038 -54595816 + HERVH LTR ERV1 7376 7713 0 2701 75 97 12 chr2 196092038 196092451 -54595403 + LTR7 LTR ERV1 1 448 -2 216 202 60 12 chr2 196092453 196092537 -54595317 + (TATAA)n Simple_repeat Simple_repeat 2 89 0 213 39 0 0 chr2 196092551 196092577 -54595277 + (TA)n Simple_repeat Simple_repeat 2 27 0 476 332 38 19 chr2 196092881 196093143 -54594711 - LTR16A LTR ERVL -124 326 60 28 48 0 0 chr2 196093211 196093253 -54594601 + AT_rich Low_complexity Low_complexity 1 42 0 1328 261 113 45 chr2 196093258 196093416 -54594438 - L1MD2 LINE L1 -18 6341 6195 1096 223 18 94 chr2 196093416 196093811 -54594043 + MLT1A1 LTR MaLR 1 365 0 1328 261 113 45 chr2 196093811 196093850 -54594004 - L1MD2 LINE L1 -164 6195 6160 198 0 0 0 chr2 196093850 196093872 -54593982 + (TG)n Simple_repeat Simple_repeat 1 22 0 1328 261 113 45 chr2 196093872 196094313 -54593541 - L1MD2 LINE L1 -199 6160 5659 568 238 39 19 chr2 196094308 196094514 -54593340 + L1ME1 LINE L1 5710 5919 -247 * 1604 216 36 18 chr2 196094514 196094903 -54592951 - MER89-int LTR ERV1 -3115 3686 3291 619 232 124 110 chr2 196094891 196095145 -54592709 - MER89-int LTR ERV1 -5852 949 683 * 189 94 0 0 chr2 196095145 196095177 -54592677 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 619 232 124 110 chr2 196095177 196095405 -54592449 - MER89-int LTR ERV1 -6118 683 460 616 247 71 44 chr2 196095470 196095766 -54592088 - MER89-int LTR ERV1 -6446 355 52 345 161 18 95 chr2 196095948 196096094 -54591760 - MER89 LTR ERV1 -327 232 1 703 352 77 44 chr2 196096287 196097066 -54590788 - L2 LINE L2 -2214 1100 296 215 224 0 20 chr2 196097289 196097338 -54590516 + GA-rich Low_complexity Low_complexity 1 48 0 396 0 0 0 chr2 196098136 196098180 -54589674 + (CA)n Simple_repeat Simple_repeat 1 44 0 290 138 17 0 chr2 196098298 196098356 -54589498 + GA-rich Low_complexity Low_complexity 2 60 0 523 205 25 57 chr2 196098679 196098801 -54589053 + FLAM_C SINE Alu 1 118 -15 184 204 0 91 chr2 196099916 196099960 -54587894 + L2 LINE L2 327 366 -2948 253 370 10 0 chr2 196100319 196100419 -54587435 + L2 LINE L2 2872 2972 -300 2031 145 0 7 chr2 196100454 196100758 -54587096 - AluSx SINE Alu -10 302 1 181 298 0 18 chr2 196100857 196100914 -54586940 + L2 LINE L2 3255 3310 -3 322 244 63 0 chr2 196101263 196101390 -54586464 + HAL1 LINE L1 1062 1196 -1311 518 308 63 11 chr2 196101427 196101774 -54586080 + HAL1 LINE L1 1284 1648 -859 259 136 0 0 chr2 196101829 196101873 -54585981 + HAL1 LINE L1 1980 2023 -484 2600 99 95 7 chr2 196101973 196102385 -54585469 + LTR7 LTR ERV1 1 448 -2 7902 107 45 6 chr2 196102387 196103683 -54584171 + HERVH LTR ERV1 1 1346 -6367 3932 139 82 55 chr2 196103682 196105105 -54582749 + pTR5 LTR ERV1 742 2606 0 * 2506 82 3 8 chr2 196105105 196105472 -54582382 + HERVH LTR ERV1 1343 1707 -6006 26135 131 10 72 chr2 196107633 196112969 -54574885 + L1P LINE L1 12 5015 -1131 2054 157 104 1 chr2 196113071 196113526 -54574328 + SATR1 Satellite Satellite 1 501 -1 2052 207 101 13 chr2 196113556 196115267 -54572587 + SATR1 Satellite Satellite 1 1861 -125 5149 259 65 54 chr2 196115395 196116053 -54571801 - L1M2 LINE L1 -4593 2256 1606 2312 112 0 0 chr2 196116053 196116358 -54571496 - AluSx SINE Alu -7 305 1 5149 259 65 54 chr2 196116358 196117923 -54569931 - L1M2 LINE L1 -5243 1606 10 1280 176 60 81 chr2 196117975 196118356 -54569498 - THE1C LTR MaLR -2 373 1 394 308 32 11 chr2 196118642 196118827 -54569027 + L1ME4a LINE L1 5709 5897 -224 1516 197 4 0 chr2 196119197 196119471 -54568383 + AluJo SINE Alu 12 286 -26 217 339 26 35 chr2 196120176 196120291 -54567563 + L2 LINE L2 3200 3313 0 248 200 15 0 chr2 196120330 196120395 -54567459 + (TA)n Simple_repeat Simple_repeat 2 67 0 599 0 14 0 chr2 196120396 196120467 -54567387 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 405 260 93 7 chr2 196121388 196121538 -54566316 - MER58B DNA MER1_type 0 341 179 39 22 0 0 chr2 196121672 196121718 -54566136 + AT_rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr2 196122669 196122697 -54565157 + AT_rich Low_complexity Low_complexity 1 28 0 247 308 36 28 chr2 196123100 196123295 -54564559 - MIR SINE MIR -2 260 15 332 299 58 15 chr2 196124223 196124360 -54563494 + L1MEc LINE L1 1120 1262 -5147 8186 160 28 9 chr2 196124532 196126016 -54561838 - Tigger4(Zombi) DNA MER2_type -1208 1523 11 1014 315 37 17 chr2 196126142 196126517 -54561337 - L1MEc LINE L1 -5203 1193 798 2882 6 0 0 chr2 196126517 196126828 -54561026 - AluYb8 SINE Alu -7 311 1 1014 315 37 17 chr2 196126828 196127099 -54560755 - L1MEc LINE L1 -5598 798 534 431 256 20 36 chr2 196127144 196127339 -54560515 + L1M4 LINE L1 3749 3940 -2206 661 277 102 79 chr2 196127825 196128804 -54559050 + L1ME LINE L1 523 1613 -4648 2088 116 3 7 chr2 196128804 196129126 -54558728 + AluSc SINE Alu 1 309 0 661 277 102 79 chr2 196129126 196129674 -54558180 + L1ME LINE L1 1613 2147 -4114 535 287 23 23 chr2 196129719 196129984 -54557870 + L1ME LINE L1 2778 3042 -3038 262 304 116 41 chr2 196133346 196133708 -54554146 - L1M4 LINE L1 -1794 4352 3964 26 30 0 0 chr2 196133756 196133789 -54554065 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 196134626 196134647 -54553207 + AT_rich Low_complexity Low_complexity 1 21 0 1343 158 59 4 chr2 196134786 196135040 -54552814 + L1PA16 LINE L1 5897 6164 -2 389 327 47 20 chr2 196135071 196135325 -54552529 + L1MEc LINE L1 1316 1576 -5011 616 270 20 0 chr2 196135348 196135496 -54552358 + MER5A DNA MER1_type 7 157 -32 2137 110 0 3 chr2 196135725 196136017 -54551837 + AluSg SINE Alu 1 291 -19 349 215 13 13 chr2 196137406 196137485 -54550369 + MLT1G LTR MaLR 11 89 -501 254 255 0 0 chr2 196137498 196137545 -54550309 + MER5A DNA MER1_type 111 157 -32 1029 283 112 47 chr2 196137594 196138045 -54549809 + MLT1G LTR MaLR 125 590 0 1697 202 19 50 chr2 196138415 196138791 -54549063 - MSTB LTR MaLR 0 426 63 22 0 0 0 chr2 196138859 196138881 -54548973 + AT_rich Low_complexity Low_complexity 1 22 0 345 329 15 15 chr2 196139457 196139594 -54548260 + MIR SINE MIR 126 262 0 197 269 15 45 chr2 196139786 196139853 -54548001 - MIR SINE MIR -123 139 75 24 53 0 0 chr2 196140366 196140404 -54547450 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 196140490 196140512 -54547342 + AT_rich Low_complexity Low_complexity 1 22 0 1332 175 31 0 chr2 196140764 196141050 -54546804 + L1MA8 LINE L1 5991 6285 -6 3046 202 15 11 chr2 196141125 196141794 -54546060 - L1MB3 LINE L1 -5 6178 5507 522 254 0 0 chr2 196141794 196141936 -54545918 - L1MB3 LINE L1 -3425 2721 2580 2485 56 0 3 chr2 196141992 196142297 -54545557 + AluY SINE Alu 1 304 -7 365 197 0 0 chr2 196142490 196142566 -54545288 - L1MB3 LINE L1 -3761 2385 2310 556 118 0 35 chr2 196142567 196142652 -54545202 + MSTD LTR MaLR 1 82 -314 380 323 171 23 chr2 196142902 196143289 -54544565 - L2 LINE L2 -842 2472 2029 29 0 0 0 chr2 196143493 196143522 -54544332 + AT_rich Low_complexity Low_complexity 1 29 0 2999 183 18 22 chr2 196145343 196145970 -54541884 - L1MA8 LINE L1 -4 6287 5664 1717 215 37 0 chr2 196145970 196146209 -54541645 - L1MA8 LINE L1 -906 5240 4980 2041 113 17 7 chr2 196146209 196146510 -54541344 - AluSq SINE Alu -9 304 1 1717 215 37 0 chr2 196146510 196146652 -54541202 - L1MA8 LINE L1 -1166 4980 4845 * 20329 174 22 66 chr2 196146651 196153518 -54534336 + L1M1 LINE L1 16 6579 -986 2135 100 9 40 chr2 196153518 196153839 -54534015 + AluSq SINE Alu 1 311 -2 20329 174 22 66 chr2 196153839 196153919 -54533935 + L1M1 LINE L1 6579 6661 -904 508 256 70 97 chr2 196154492 196154931 -54532923 + MLT1H LTR MaLR 42 547 -2 1427 179 16 51 chr2 196155012 196155325 -54532529 + AluSx SINE Alu 1 302 -10 2356 79 0 0 chr2 196156227 196156531 -54531323 + AluY SINE Alu 1 304 -7 195 371 72 10 chr2 196157138 196157235 -54530619 + L2 LINE L2 3137 3239 -33 209 297 10 50 chr2 196158046 196158147 -54529707 + MER91C DNA MER1_type 14 110 -30 276 399 7 29 chr2 196158253 196158391 -54529463 + L2 LINE L2 2914 3048 -224 1496 149 31 0 chr2 196158410 196158671 -54529183 - L1MA7 LINE L1 -312 5979 5711 770 162 73 34 chr2 196158656 196158860 -54528994 + L1MA7 LINE L1 6079 6290 -1 * 24 85 0 0 chr2 196159988 196160047 -54527807 + AT_rich Low_complexity Low_complexity 1 59 0 28 48 0 0 chr2 196160307 196160349 -54527505 + AT_rich Low_complexity Low_complexity 1 42 0 249 362 9 0 chr2 196161531 196161647 -54526207 + Charlie8 DNA MER1_type 83 199 -2218 818 234 35 20 chr2 196163204 196163401 -54524453 - MER8 DNA MER2_type 0 239 40 261 232 24 61 chr2 196163395 196163477 -54524377 - MER8 DNA MER2_type -159 80 2 * 2139 100 10 7 chr2 196164085 196164376 -54523478 + AluSg SINE Alu 3 294 -16 7127 87 4 20 chr2 196165351 196166336 -54521518 - LTR5 LTR ERVK 0 969 1 194 360 79 7 chr2 196167176 196167315 -54520539 + L2 LINE L2 3165 3313 0 21 0 0 0 chr2 196167692 196167713 -54520141 + AT_rich Low_complexity Low_complexity 1 21 0 373 265 48 14 chr2 196167982 196168129 -54519725 + MLT1H LTR MaLR 396 547 -2 1762 118 8 8 chr2 196172744 196172999 -54514855 - AluSc SINE Alu -54 255 1 23 0 0 0 chr2 196173571 196173594 -54514260 + AT_rich Low_complexity Low_complexity 1 23 0 481 309 133 5 chr2 196174138 196174348 -54513506 - MIR SINE MIR -24 238 2 2260 100 3 0 chr2 196174499 196174800 -54513054 - AluSp SINE Alu -11 302 1 26 64 0 0 chr2 196174811 196174858 -54512996 + AT_rich Low_complexity Low_complexity 1 47 0 342 245 10 20 chr2 196174865 196174967 -54512887 - L1MEc LINE L1 -2544 3671 3571 704 189 57 43 chr2 196175001 196175266 -54512588 - L1MEc LINE L1 -3923 2315 2066 3624 175 15 52 chr2 196175289 196175788 -54512066 - LTR1 LTR ERV1 -14 771 312 1975 90 8 15 chr2 196175788 196176056 -54511798 - AluSx SINE Alu -17 295 30 3624 175 15 52 chr2 196176056 196176357 -54511497 - LTR1 LTR ERV1 -473 312 1 650 273 125 17 chr2 196176358 196176703 -54511151 - L1MEc LINE L1 -4335 2061 1680 225 0 0 0 chr2 196176722 196176747 -54511107 + (TG)n Simple_repeat Simple_repeat 2 26 0 517 330 33 8 chr2 196176747 196177141 -54510713 - L1MEc LINE L1 -4925 1471 1068 484 258 7 0 chr2 196177179 196177330 -54510524 - L1MEc LINE L1 -5519 877 726 266 191 9 38 chr2 196177604 196177709 -54510145 + GA-rich Low_complexity Low_complexity 6 107 0 481 190 0 0 chr2 196178128 196178207 -54509647 + Tigger5 DNA MER2_type 1 79 -2244 21 0 0 0 chr2 196179597 196179618 -54508236 + AT_rich Low_complexity Low_complexity 1 21 0 866 300 66 11 chr2 196180604 196181061 -54506793 - HAL1b LINE L1 -545 803 322 28 61 0 0 chr2 196181469 196181518 -54506336 + AT_rich Low_complexity Low_complexity 1 49 0 28 48 0 0 chr2 196181840 196181882 -54505972 + AT_rich Low_complexity Low_complexity 1 42 0 494 315 40 22 chr2 196182161 196182485 -54505369 - L1ME LINE L1 -579 5585 5256 21 82 0 0 chr2 196182588 196182637 -54505217 + AT_rich Low_complexity Low_complexity 1 49 0 550 221 67 132 chr2 196182754 196183032 -54504822 + MLT1C LTR MaLR 12 335 -132 3689 158 6 2 chr2 196183032 196183663 -54504191 + MER41B LTR ERV1 1 634 -1 550 221 67 132 chr2 196183663 196183787 -54504067 + MLT1C LTR MaLR 335 465 -2 2888 240 107 34 chr2 196183895 196184668 -54503186 + L1MC3 LINE L1 520 1235 -5329 2305 108 0 0 chr2 196184668 196184975 -54502879 + AluSg SINE Alu 1 307 -3 2888 240 107 34 chr2 196184975 196185144 -54502710 + L1MC3 LINE L1 1235 1390 -5174 1617 223 13 21 chr2 196185144 196185521 -54502333 - MLT1A2 LTR MaLR 0 374 1 2888 240 107 34 chr2 196185521 196186146 -54501708 + L1MC3 LINE L1 1390 1968 -4596 2149 107 0 7 chr2 196186146 196186446 -54501408 + AluSx SINE Alu 2 299 -13 2888 240 107 34 chr2 196186446 196187486 -54500368 + L1MC3 LINE L1 1968 2931 -3633 865 173 0 12 chr2 196187486 196187654 -54500200 - L1PA16 LINE L1 -11 6155 5990 2888 240 107 34 chr2 196187654 196188088 -54499766 + L1MC3 LINE L1 2931 3914 -2650 769 241 110 51 chr2 196188093 196188330 -54499524 - MLT1D LTR MaLR -3 502 252 884 284 46 26 chr2 196188348 196188693 -54499161 + L1MC3 LINE L1 4374 4725 -1839 968 238 28 62 chr2 196188694 196188984 -54498870 + MLT1D LTR MaLR 3 282 -223 234 0 0 0 chr2 196189034 196189060 -54498794 + (CA)n Simple_repeat Simple_repeat 2 27 0 9015 225 33 32 chr2 196189061 196191901 -54495953 + L1MC3 LINE L1 4840 8133 -70 248 333 33 46 chr2 196192045 196192198 -54495656 - L2 LINE L2 -1 3312 3162 3733 154 36 34 chr2 196192938 196193722 -54494132 - L1MC1 LINE L1 0 6333 5549 32 67 0 0 chr2 196193811 196193871 -54493983 + AT_rich Low_complexity Low_complexity 1 60 0 180 0 0 0 chr2 196194011 196194031 -54493823 + (AAATG)n Simple_repeat Simple_repeat 1 20 0 1205 289 64 55 chr2 196194044 196194621 -54493233 + MLT1E LTR MaLR 10 591 -2 1154 271 66 47 chr2 196194933 196195405 -54492449 + MLT1H1 LTR MaLR 75 555 0 541 186 37 75 chr2 196195927 196196088 -54491766 + L1ME2 LINE L1 5997 6151 -13 42 36 0 0 chr2 196196111 196196167 -54491687 + AT_rich Low_complexity Low_complexity 1 56 0 2265 77 0 0 chr2 196196466 196196764 -54491090 + AluY SINE Alu 14 311 0 520 306 7 14 chr2 196197030 196197174 -54490680 + MLT1H1 LTR MaLR 43 185 -370 632 218 8 0 chr2 196197180 196197313 -54490541 - FLAM_A SINE Alu 0 142 9 191 364 64 21 chr2 196197435 196197575 -54490279 + MIR SINE MIR 49 194 -68 1961 136 13 7 chr2 196197601 196197909 -54489945 + AluSx SINE Alu 3 312 0 483 98 20 39 chr2 196197915 196198017 -54489837 + (GGGAA)n Simple_repeat Simple_repeat 3 102 0 943 261 38 79 chr2 196198052 196198443 -54489411 - MLT1E LTR MaLR -212 381 7 2130 230 48 2 chr2 196198825 196199308 -54488546 + MLT1D LTR MaLR 1 505 0 192 125 0 0 chr2 196199346 196199378 -54488476 + (TC)n Simple_repeat Simple_repeat 1 32 0 1957 256 35 20 chr2 196199602 196200109 -54487745 - MLT2B2 LTR ERVL 0 515 1 21 71 0 0 chr2 196201065 196201107 -54486747 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 196201374 196201395 -54486459 + AT_rich Low_complexity Low_complexity 1 21 0 210 368 60 8 chr2 196201613 196201730 -54486124 - L3b LINE CR1 0 1583 1461 189 0 0 0 chr2 196201870 196201891 -54485963 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 395 337 56 0 chr2 196202133 196202311 -54485543 - MIR SINE MIR -26 236 49 383 191 36 0 chr2 196202444 196202528 -54485326 - L1MC4 LINE L1 0 8042 7956 1840 141 6 31 chr2 196203810 196204130 -54483724 - AluSq SINE Alu 0 313 2 28 29 0 0 chr2 196205156 196205191 -54482663 + AT_rich Low_complexity Low_complexity 1 35 0 26 74 0 0 chr2 196205249 196205303 -54482551 + AT_rich Low_complexity Low_complexity 1 54 0 231 285 131 15 chr2 196205944 196206074 -54481780 - MIR SINE MIR -30 232 88 215 317 134 12 chr2 196207039 196207203 -54480651 - MIR SINE MIR 0 262 79 213 214 0 0 chr2 196207808 196207850 -54480004 + (TG)n Simple_repeat Simple_repeat 1 42 0 641 228 0 8 chr2 196208436 196208563 -54479291 + FLAM_A SINE Alu 1 126 -7 26 30 0 0 chr2 196209312 196209345 -54478509 + AT_rich Low_complexity Low_complexity 1 33 0 182 480 8 8 chr2 196209423 196209546 -54478308 - L2 LINE L2 -207 3065 2943 206 326 0 0 chr2 196209879 196209974 -54477880 + A-rich Low_complexity Low_complexity 1 95 0 1257 65 12 0 chr2 196210164 196210332 -54477522 + L1PA3 LINE L1 5983 6152 -3 183 100 0 0 chr2 196210340 196210370 -54477484 + (A)n Simple_repeat Simple_repeat 1 30 0 21 82 0 0 chr2 196210625 196210674 -54477180 + AT_rich Low_complexity Low_complexity 1 49 0 644 261 53 21 chr2 196210684 196210910 -54476944 + L1MCa LINE L1 6 209 -5836 2501 276 53 28 chr2 196210922 196212465 -54475389 + L1MCa LINE L1 951 2765 -3980 * 6333 221 61 31 chr2 196212463 196213600 -54474254 + L1MC3 LINE L1 5845 7053 -732 1938 139 78 23 chr2 196213600 196213945 -54473909 + THE1B LTR MaLR 1 364 0 6333 221 61 31 chr2 196213945 196214504 -54473350 + L1MC3 LINE L1 7053 7593 -192 1292 232 40 112 chr2 196214505 196215005 -54472849 + MLT2B1 LTR ERVL 1 464 -56 234 91 0 0 chr2 196215006 196215039 -54472815 + (TC)n Simple_repeat Simple_repeat 1 33 0 228 67 0 0 chr2 196215039 196215069 -54472785 + (CA)n Simple_repeat Simple_repeat 1 30 0 214 302 0 0 chr2 196215075 196215128 -54472726 + (TG)n Simple_repeat Simple_repeat 2 54 0 228 150 25 0 chr2 196215129 196215169 -54472685 + MLT2B1 LTR ERVL 416 456 -8 508 195 18 92 chr2 196215195 196215359 -54472495 + L1MC3 LINE L1 7633 7784 -1 246 32 0 0 chr2 196216531 196216562 -54471292 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2090 119 3 0 chr2 196216564 196216858 -54470996 - AluY SINE Alu -16 295 1 1246 274 79 30 chr2 196217263 196217730 -54470124 + LTR40a LTR ERVL 30 519 0 284 303 69 48 chr2 196217811 196217956 -54469898 + L2 LINE L2 2325 2472 -842 205 327 166 22 chr2 196218010 196218233 -54469621 + L2 LINE L2 2638 2892 -422 540 301 46 8 chr2 196218749 196218969 -54468885 - MIR SINE MIR 0 262 36 24 67 0 0 chr2 196219692 196219737 -54468117 + AT_rich Low_complexity Low_complexity 1 45 0 181 311 89 0 chr2 196220361 196220451 -54467403 - MIR SINE MIR -71 191 94 1908 191 109 18 chr2 196220532 196221845 -54466009 - SATR1 Satellite Satellite -2 1432 1 428 215 6 37 chr2 196221846 196222009 -54465845 + (TAA)n Simple_repeat Simple_repeat 3 160 0 221 206 11 67 chr2 196222043 196222223 -54465631 + (TAA)n Simple_repeat Simple_repeat 1 170 0 1721 214 109 42 chr2 196222224 196222982 -54464872 + SATR1 Satellite Satellite 1 808 -148 23 0 0 0 chr2 196223595 196223618 -54464236 + AT_rich Low_complexity Low_complexity 1 23 0 1489 242 110 2 chr2 196224148 196224602 -54463252 + L1MEc LINE L1 418 920 -5476 326 225 34 4 chr2 196224770 196224877 -54462977 + L1M3d LINE L1 1038 1383 -4753 1123 250 135 17 chr2 196224882 196225363 -54462491 + L1ME3A LINE L1 5616 6161 -9 218 182 0 0 chr2 196226529 196226573 -54461281 + (CA)n Simple_repeat Simple_repeat 1 44 0 22 0 0 0 chr2 196227842 196227864 -54459990 + AT_rich Low_complexity Low_complexity 1 22 0 295 326 61 7 chr2 196228676 196228823 -54459031 + MIR SINE MIR 65 219 -43 258 32 0 0 chr2 196228846 196228877 -54458977 + (TG)n Simple_repeat Simple_repeat 2 32 0 197 291 0 18 chr2 196229789 196229844 -54458010 - L2 LINE L2 0 3272 3219 22 35 0 0 chr2 196230064 196230093 -54457761 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 196230215 196230238 -54457616 + AT_rich Low_complexity Low_complexity 1 23 0 500 188 0 0 chr2 196230256 196230336 -54457518 - FLAM SINE Alu -24 119 40 2368 53 0 7 chr2 196230708 196231012 -54456842 + AluY SINE Alu 1 302 -9 372 276 69 14 chr2 196231019 196231164 -54456690 + MIR SINE MIR 95 247 -15 200 294 79 63 chr2 196231235 196231361 -54456493 + MIR SINE MIR 64 191 -71 482 70 14 0 chr2 196231855 196231926 -54455928 + (TA)n Simple_repeat Simple_repeat 1 72 0 22 35 0 0 chr2 196232100 196232129 -54455725 + AT_rich Low_complexity Low_complexity 1 29 0 287 325 108 18 chr2 196232467 196232799 -54455055 + HAL1b LINE L1 381 742 -606 2209 108 0 3 chr2 196233221 196233517 -54454337 + AluSq SINE Alu 1 295 -18 27 81 0 0 chr2 196233687 196233749 -54454105 + AT_rich Low_complexity Low_complexity 1 62 0 207 143 48 0 chr2 196234031 196234073 -54453781 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 525 240 58 97 chr2 196234121 196234193 -54453661 + L1MC5 LINE L1 2947 3020 -4941 883 198 0 0 chr2 196234193 196234355 -54453499 + FRAM SINE Alu 1 162 -4 525 240 58 97 chr2 196234355 196234861 -54452993 + L1MC5 LINE L1 3020 6856 -1105 507 273 27 107 chr2 196234860 196235234 -54452620 + L1MC3 LINE L1 6034 6377 -1408 * 1512 172 42 14 chr2 196235537 196235822 -54452032 - AluJb SINE Alu -9 303 11 345 372 58 29 chr2 196236218 196236425 -54451429 - L2 LINE L2 -338 2976 2764 355 258 65 63 chr2 196236425 196236669 -54451185 - L2 LINE L2 -1366 1948 1737 3331 138 111 0 chr2 196236705 196237256 -54450598 + LTR9 LTR ERV1 1 612 0 402 281 290 5 chr2 196237263 196237480 -54450374 - L2 LINE L2 -2103 1211 933 2246 147 39 7 chr2 196237514 196237943 -54449911 - MER61C LTR ERV1 0 434 4 637 290 71 34 chr2 196237946 196238270 -54449584 - L2 LINE L2 -2419 895 560 284 83 21 0 chr2 196239432 196239480 -54448374 + (CA)n Simple_repeat Simple_repeat 2 50 0 303 28 0 0 chr2 196241219 196241255 -54446599 + (CA)n Simple_repeat Simple_repeat 2 37 0 309 24 0 0 chr2 196241747 196241788 -54446066 - L1PA6 LINE L1 -4 6150 6110 4024 144 79 39 chr2 196242081 196243094 -54444760 - MER11B LTR ERVK -87 1179 1 264 30 0 0 chr2 196243136 196243169 -54444685 + (TG)n Simple_repeat Simple_repeat 2 34 0 216 275 104 37 chr2 196244637 196244757 -54443097 + MIR SINE MIR 16 141 -67 639 343 68 41 chr2 196244928 196245322 -54442532 - L2 LINE L2 -4 3309 2905 189 121 17 35 chr2 196245699 196245757 -54442097 + T-rich Low_complexity Low_complexity 3 59 0 282 319 150 0 chr2 196246216 196246329 -54441525 + MIR SINE MIR 17 146 -62 201 222 16 16 chr2 196248276 196248339 -54439515 + (TTA)n Simple_repeat Simple_repeat 3 65 0 207 0 0 0 chr2 196248914 196248937 -54438917 + (TG)n Simple_repeat Simple_repeat 2 24 0 26 50 0 0 chr2 196248997 196249037 -54438817 + AT_rich Low_complexity Low_complexity 1 40 0 344 328 108 5 chr2 196249043 196249247 -54438607 - MIR SINE MIR -4 258 34 1293 295 81 28 chr2 196249323 196249963 -54437891 - MER20B DNA MER1_type -33 750 77 2733 179 34 31 chr2 196250589 196251141 -54436713 + MLT2B3 LTR ERVL 1 554 0 3151 134 11 128 chr2 196251201 196251919 -54435935 - MER51A LTR ERV1 0 634 1 21 82 0 0 chr2 196252144 196252193 -54435661 + AT_rich Low_complexity Low_complexity 1 49 0 358 280 104 16 chr2 196252749 196252942 -54434912 - L1MC4 LINE L1 -16 8026 7817 315 290 214 7 chr2 196253196 196253341 -54434513 - MER5A DNA MER1_type -2 187 13 593 279 28 12 chr2 196253473 196253724 -54434130 - L1MC4a LINE L1 -393 7415 7161 189 0 0 0 chr2 196255880 196255901 -54431953 + (TG)n Simple_repeat Simple_repeat 1 21 0 278 271 42 21 chr2 196256371 196256467 -54431387 + LTR45 LTR ERV1 1 98 -427 739 196 47 26 chr2 196256723 196256964 -54430890 + LTR45 LTR ERV1 239 525 0 922 262 58 55 chr2 196257141 196257557 -54430297 - L1MC4 LINE L1 -910 7132 6716 1249 240 29 0 chr2 196257948 196258227 -54429627 - AluJo SINE Alu -14 298 12 1173 233 126 17 chr2 196259569 196259648 -54428206 - L1ME2 LINE L1 -227 5937 5868 480 48 0 0 chr2 196259648 196259711 -54428143 + (TG)n Simple_repeat Simple_repeat 2 64 0 1173 233 126 17 chr2 196259711 196260052 -54427802 - L1ME2 LINE L1 -296 5868 5471 903 213 124 48 chr2 196260159 196260530 -54427324 - LTR37A LTR ERV1 -2 424 26 228 86 0 0 chr2 196260930 196260965 -54426889 + (GA)n Simple_repeat Simple_repeat 1 35 0 1506 134 214 22 chr2 196261026 196261385 -54426469 + MSTA LTR MaLR 1 428 0 23 33 0 0 chr2 196262357 196262387 -54425467 + AT_rich Low_complexity Low_complexity 1 30 0 4172 196 48 13 chr2 196262398 196263522 -54424332 - L1MD1 LINE L1 -32 6210 5049 240 281 49 0 chr2 196263685 196263767 -54424087 + L1MC4 LINE L1 6613 6698 -1344 299 295 26 0 chr2 196263769 196263847 -54424007 + (TATATG)n Simple_repeat Simple_repeat 1 80 0 237 258 21 65 chr2 196263847 196263940 -54423914 - L1MC4 LINE L1 -1340 6702 6614 232 289 24 0 chr2 196263900 196263983 -54423871 + L1MC4 LINE L1 6614 6698 -1344 * 211 250 0 0 chr2 196263985 196264029 -54423825 + (TA)n Simple_repeat Simple_repeat 1 44 0 257 318 0 0 chr2 196264033 196264121 -54423733 + L1MC4 LINE L1 6615 6702 -1340 235 310 23 0 chr2 196264099 196264186 -54423668 - L1MC4 LINE L1 -1340 6702 6614 * 257 318 0 0 chr2 196264135 196264223 -54423631 + L1MC4 LINE L1 6615 6702 -1340 239 245 0 64 chr2 196264201 196264295 -54423559 - L1MC4 LINE L1 -1340 6702 6615 * 264 296 0 0 chr2 196264303 196264411 -54423443 + (TATATG)n Simple_repeat Simple_repeat 3 110 0 246 289 72 0 chr2 196264418 196264501 -54423353 - L1MC4 LINE L1 -1339 6703 6615 238 253 0 22 chr2 196264511 196264602 -54423252 + (TATATG)n Simple_repeat Simple_repeat 2 90 0 225 300 0 0 chr2 196264604 196264664 -54423190 - L1MD3 LINE L1 -1327 6668 6609 243 250 0 31 chr2 196264664 196264728 -54423126 - L1MD3 LINE L1 -1327 6668 6607 222 222 0 0 chr2 196264728 196264782 -54423072 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 622 173 11 43 chr2 196264795 196264980 -54422874 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 304 256 47 23 chr2 196265010 196265096 -54422758 + L1MC4 LINE L1 6614 6701 -1341 362 333 122 26 chr2 196265459 196265876 -54421978 - L1M4 LINE L1 -2061 4085 3629 26 30 0 0 chr2 196266110 196266143 -54421711 + AT_rich Low_complexity Low_complexity 1 33 0 657 294 103 56 chr2 196266804 196267212 -54420642 - MLT1F LTR MaLR -76 466 40 256 274 96 0 chr2 196267426 196267499 -54420355 + MLT1L LTR MaLR 454 533 -82 217 263 0 18 chr2 196267665 196267722 -54420132 + CT-rich Low_complexity Low_complexity 4 59 0 1703 205 99 34 chr2 196268250 196268724 -54419130 - MLT1D LTR MaLR 0 505 1 2918 231 61 53 chr2 196269322 196269670 -54418184 - L1MC3 LINE L1 -1 7784 7440 1518 111 43 82 chr2 196269670 196269949 -54417905 - AluSx SINE Alu -44 268 1 2918 231 61 53 chr2 196269949 196270580 -54417274 - L1MC3 LINE L1 -345 7440 6793 1778 174 83 9 chr2 196270580 196270919 -54416935 + THE1B LTR MaLR 1 364 0 2918 231 61 53 chr2 196270919 196271036 -54416818 - L1MC3 LINE L1 -992 6793 6678 1272 174 169 54 chr2 196271043 196271393 -54416461 - MLT1B LTR MaLR 0 390 1 32 43 0 0 chr2 196271948 196271994 -54415860 + AT_rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr2 196272061 196272089 -54415765 + AT_rich Low_complexity Low_complexity 1 28 0 1014 231 50 43 chr2 196272654 196272957 -54414897 + MLT1C LTR MaLR 6 310 -157 6949 31 1 0 chr2 196274244 196275073 -54412781 + L1PA4 LINE L1 5324 6153 -2 389 288 29 43 chr2 196275284 196275423 -54412431 + MIR SINE MIR 1 137 -125 183 369 101 7 chr2 196276004 196276153 -54411701 - MIR SINE MIR -77 185 23 22 56 0 0 chr2 196277929 196277965 -54409889 + AT_rich Low_complexity Low_complexity 1 36 0 1877 92 116 36 chr2 196279763 196280100 -54407754 - THE1B LTR MaLR 0 364 1 203 290 14 43 chr2 196281387 196281456 -54406398 + L2 LINE L2 3156 3222 -50 440 181 12 12 chr2 196281888 196281971 -54405883 + MLT1A2 LTR MaLR 280 362 -12 24 0 0 0 chr2 196281993 196282017 -54405837 + AT_rich Low_complexity Low_complexity 1 24 0 441 0 0 0 chr2 196284120 196284169 -54403685 + (CA)n Simple_repeat Simple_repeat 1 49 0 1619 185 39 24 chr2 196284171 196284502 -54403352 - MER44D DNA MER2_type -1 604 214 1677 179 3 10 chr2 196284502 196284809 -54403045 - Tigger2 DNA MER2_type 0 2718 2414 858 246 11 6 chr2 196284802 196284985 -54402869 - MER44D DNA MER2_type -521 184 1 * 431 265 80 40 chr2 196285112 196285437 -54402417 + HAL1 LINE L1 1424 1761 -746 206 116 23 0 chr2 196285523 196285566 -54402288 + (TA)n Simple_repeat Simple_repeat 2 45 0 266 188 15 15 chr2 196285644 196285777 -54402077 + (TA)n Simple_repeat Simple_repeat 2 134 0 25 75 0 0 chr2 196285870 196285923 -54401931 + AT_rich Low_complexity Low_complexity 1 53 0 275 278 97 0 chr2 196286086 196286158 -54401696 - L2 LINE L2 -3 3310 3232 235 298 0 0 chr2 196286185 196286232 -54401622 + MIR SINE MIR 8 54 -208 459 328 70 5 chr2 196286266 196286467 -54401387 + MIR SINE MIR 49 262 0 766 208 77 0 chr2 196286890 196287058 -54400796 - MER2 DNA MER2_type 0 345 165 770 186 64 0 chr2 196287155 196287295 -54400559 - MER2 DNA MER2_type -180 165 17 29 47 0 0 chr2 196287337 196287380 -54400474 + AT_rich Low_complexity Low_complexity 1 43 0 1541 172 24 38 chr2 196287580 196287871 -54399983 - AluJb SINE Alu -25 287 1 596 266 0 0 chr2 196289549 196289673 -54398181 - BSR/Beta Satellite Satellite -16 126 3 717 299 25 66 chr2 196289888 196290072 -54397782 + HAL1 LINE L1 489 656 -1851 2122 125 0 0 chr2 196290072 196290367 -54397487 - AluSx SINE Alu -17 295 1 717 299 25 66 chr2 196290367 196290500 -54397354 + HAL1 LINE L1 656 793 -1714 22 88 0 0 chr2 196290866 196290923 -54396931 + AT_rich Low_complexity Low_complexity 1 57 0 29 28 0 0 chr2 196291501 196291537 -54396317 + AT_rich Low_complexity Low_complexity 1 36 0 29 60 0 0 chr2 196291970 196292020 -54395834 + AT_rich Low_complexity Low_complexity 1 50 0 248 273 40 20 chr2 196292355 196292454 -54395400 - MIR SINE MIR -88 174 74 21 36 0 0 chr2 196292762 196292790 -54395064 + AT_rich Low_complexity Low_complexity 1 28 0 596 41 31 21 chr2 196293644 196293741 -54394113 + (TCTA)n Simple_repeat Simple_repeat 3 100 0 1085 266 108 14 chr2 196294010 196294443 -54393411 - MER90 LTR ERV1 -139 475 2 364 222 0 0 chr2 196294631 196294703 -54393151 + MLT1E2 LTR MaLR 554 625 -1 24 0 0 0 chr2 196297221 196297245 -54390609 + AT_rich Low_complexity Low_complexity 1 24 0 755 156 8 0 chr2 196297253 196297375 -54390479 + FLAM_C SINE Alu 1 123 -20 239 139 23 0 chr2 196297375 196297418 -54390436 + MIR SINE MIR 219 262 0 22 56 0 0 chr2 196298053 196298089 -54389765 + AT_rich Low_complexity Low_complexity 1 36 0 2143 148 22 27 chr2 196299137 196299503 -54388351 - THE1B LTR MaLR 0 364 1 508 195 94 39 chr2 196302005 196302133 -54385721 - L2 LINE L2 0 3313 3179 302 295 118 20 chr2 196302211 196302465 -54385389 - L1ME4a LINE L1 0 6121 5843 207 392 32 32 chr2 196302470 196302595 -54385259 + L2 LINE L2 3188 3312 -1 516 280 57 43 chr2 196302781 196303003 -54384851 - ERVL LTR ERVL -788 4976 4748 2243 176 39 0 chr2 196303003 196303413 -54384441 + MSTA LTR MaLR 3 428 0 516 280 57 43 chr2 196303413 196303469 -54384385 - ERVL LTR ERVL -1016 4748 4694 21 71 0 0 chr2 196303544 196303586 -54384268 + AT_rich Low_complexity Low_complexity 1 42 0 382 351 85 20 chr2 196303954 196304296 -54383558 - ERVL LTR ERVL -1883 3881 3518 4115 126 29 2 chr2 196304997 196305624 -54382230 - Tigger1 DNA MER2_type 0 2418 1775 2095 166 92 0 chr2 196305624 196306016 -54381838 - MSTC LTR MaLR 0 428 1 835 186 149 5 chr2 196306028 196306243 -54381611 - MSTC-int LTR MaLR -14 1637 1392 1019 128 13 0 chr2 196306247 196306403 -54381451 - Tigger1 DNA MER2_type -1247 1171 1014 1637 138 0 4 chr2 196306403 196306642 -54381212 + AluSq SINE Alu 1 238 -75 431 97 0 0 chr2 196306642 196306704 -54381150 + AluSp/q SINE Alu 177 238 -75 * 722 87 31 79 chr2 196306701 196306828 -54381026 + AluSg/x SINE Alu 172 292 -18 5910 155 34 4 chr2 196306828 196307821 -54380033 - Tigger1 DNA MER2_type -1395 1023 1 282 327 112 27 chr2 196308031 196308254 -54379600 - ERVL LTR ERVL -3240 2524 2283 488 345 31 28 chr2 196308775 196309030 -54378824 + MIR SINE MIR 1 256 -6 837 76 0 0 chr2 196311040 196311158 -54376696 + (GGAA)n Simple_repeat Simple_repeat 1 118 0 346 356 40 13 chr2 196311310 196311459 -54376395 + MER91A DNA MER1_type 1 153 -43 493 243 193 16 chr2 196312075 196312318 -54375536 + L2 LINE L2 3015 3300 -13 240 35 0 0 chr2 196312318 196312347 -54375507 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 1481 209 18 4 chr2 196312694 196312971 -54374883 + AluJo SINE Alu 4 284 -28 303 122 0 0 chr2 196313306 196313355 -54374499 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 554 277 26 87 chr2 196314929 196315160 -54372694 + LTR16A LTR ERVL 129 345 -105 1362 100 0 0 chr2 196315162 196315352 -54372502 - AluSg/x SINE Alu 0 312 123 1971 99 6 78 chr2 196316261 196316593 -54371261 + AluSg SINE Alu 1 308 -2 203 375 78 16 chr2 196317665 196317793 -54370061 + L2 LINE L2 3133 3268 -4 24 32 0 0 chr2 196319163 196319194 -54368660 + AT_rich Low_complexity Low_complexity 1 31 0 1787 188 32 8 chr2 196319380 196319753 -54368101 - L1MB4 LINE L1 -74 6106 5725 396 269 80 60 chr2 196320064 196320265 -54367589 - L1M4 LINE L1 -6324 218 14 2791 230 27 16 chr2 196320648 196320867 -54366987 + L1MC/D LINE L1 4624 4839 -1339 2317 80 0 13 chr2 196320867 196321169 -54366685 - AluSq SINE Alu -15 298 1 2791 230 27 16 chr2 196321169 196321770 -54366084 + L1MC/D LINE L1 4839 5454 -724 622 164 3 29 chr2 196321772 196321903 -54365951 + L1MC/D LINE L1 5574 5701 -494 298 339 59 8 chr2 196321903 196322021 -54365833 - L2 LINE L2 -233 3080 2957 21 57 0 0 chr2 196323101 196323136 -54364718 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr2 196324205 196324247 -54363607 + AT_rich Low_complexity Low_complexity 1 42 0 21 57 0 0 chr2 196324601 196324636 -54363218 + AT_rich Low_complexity Low_complexity 1 35 0 272 190 63 151 chr2 196324671 196324876 -54362978 - L1M4 LINE L1 -3041 3105 2919 * 744 300 59 31 chr2 196324867 196325290 -54362564 - L1MC4a LINE L1 -1775 6033 5599 243 218 35 81 chr2 196325354 196325441 -54362413 - L1MC4a LINE L1 -1980 4166 4084 393 285 13 7 chr2 196325544 196325695 -54362159 - L1MC4a LINE L1 -2202 3944 3793 21 0 0 0 chr2 196325736 196325757 -54362097 + AT_rich Low_complexity Low_complexity 1 21 0 725 235 246 18 chr2 196326069 196326350 -54361504 + MLT1D LTR MaLR 161 505 0 282 236 32 146 chr2 196328027 196328150 -54359704 - L2 LINE L2 -34 3279 3171 23 0 0 0 chr2 196329666 196329689 -54358165 + AT_rich Low_complexity Low_complexity 1 23 0 27 73 0 0 chr2 196330012 196330067 -54357787 + AT_rich Low_complexity Low_complexity 1 55 0 839 298 86 26 chr2 196330231 196330886 -54356968 - L1ME2 LINE L1 -214 5950 5257 23 0 0 0 chr2 196331152 196331175 -54356679 + AT_rich Low_complexity Low_complexity 1 23 0 241 222 37 0 chr2 196331258 196331312 -54356542 - MER119 DNA MER1_type 0 583 528 521 288 56 0 chr2 196331417 196331542 -54356312 - MER119 DNA MER1_type -451 132 1 528 324 101 52 chr2 196332963 196333479 -54354375 + L2 LINE L2 2644 3182 -131 25 0 0 0 chr2 196333547 196333572 -54354282 + AT_rich Low_complexity Low_complexity 1 25 0 31 26 0 0 chr2 196333757 196333795 -54354059 + AT_rich Low_complexity Low_complexity 1 38 0 1455 259 66 3 chr2 196333935 196334513 -54353341 + MER114 LTR ERV 29 642 -6 210 37 0 0 chr2 196334868 196334895 -54352959 + (TA)n Simple_repeat Simple_repeat 2 28 0 3387 27 2 7 chr2 196334895 196335304 -54352550 - L1PA4 LINE L1 -12 6143 5737 2061 132 3 6 chr2 196335355 196335666 -54352188 - AluSg SINE Alu 0 310 1 2086 162 12 3 chr2 196336294 196336628 -54351226 + MER1B DNA MER1_type 1 337 0 303 379 0 0 chr2 196337502 196337618 -54350236 - ERVL LTR ERVL -618 5146 5031 988 347 19 28 chr2 196337918 196338379 -54349475 - ERVL LTR ERVL -1170 4594 4138 375 276 29 77 chr2 196338920 196339090 -54348764 + L2 LINE L2 3152 3313 0 412 288 53 18 chr2 196339103 196339273 -54348581 + L2 LINE L2 3095 3270 -43 593 343 93 18 chr2 196340824 196341273 -54346581 + L3 LINE CR1 622 1104 -473 317 321 85 33 chr2 196341398 196341610 -54346244 + L3 LINE CR1 1355 1577 0 231 394 10 0 chr2 196342172 196342276 -54345578 + MIR SINE MIR 39 143 -65 22 0 0 0 chr2 196342349 196342371 -54345483 + AT_rich Low_complexity Low_complexity 1 22 0 1556 152 9 78 chr2 196342808 196343143 -54344711 - AluJo SINE Alu 0 312 1 2178 200 38 16 chr2 196344262 196344712 -54343142 - MER74C LTR ERVL 0 460 1 1283 240 43 33 chr2 196344731 196345431 -54342423 - HERVL74 LTR ERVL -20 5665 4864 5020 224 8 2 chr2 196345499 196346452 -54341402 - HERVL74 LTR ERVL -2336 3349 2391 1011 213 85 5 chr2 196346454 196346665 -54341189 - MER74C LTR ERVL -231 229 2 198 322 144 11 chr2 196348479 196348569 -54339285 - L2 LINE L2 0 3272 3171 1871 220 74 10 chr2 196348659 196349134 -54338720 - MLT1D LTR MaLR 0 595 1 23 78 0 0 chr2 196349498 196349549 -54338305 + AT_rich Low_complexity Low_complexity 1 51 0 265 359 98 51 chr2 196349569 196350174 -54337680 - L2 LINE L2 -458 2856 2224 2512 248 49 47 chr2 196350239 196350977 -54336877 - MER21B LTR ERV1 -124 739 1 352 244 13 0 chr2 196351192 196351270 -54336584 + LTR67 LTR ERVL 144 222 -335 2319 104 0 0 chr2 196353821 196354130 -54333724 - AluSc SINE Alu 0 309 1 512 283 141 0 chr2 196354408 196354606 -54333248 - MIR SINE MIR -6 256 31 235 292 30 65 chr2 196354693 196354861 -54332993 - LTR67 LTR ERVL -40 517 356 212 171 24 0 chr2 196355651 196355692 -54332162 - MIR SINE MIR -125 137 96 296 264 62 70 chr2 196358643 196358772 -54329082 + MIR SINE MIR 20 147 -61 1928 96 68 7 chr2 196358790 196359071 -54328783 - AluSq SINE Alu -15 298 1 245 267 167 0 chr2 196359794 196359914 -54327940 - MIR SINE MIR 0 262 123 4980 102 6 3 chr2 196360166 196360851 -54327003 - LTR12 LTR ERV1 0 688 2 238 264 83 58 chr2 196363535 196363656 -54324198 + L2 LINE L2 3189 3312 -1 1270 307 100 35 chr2 196363881 196364833 -54323021 - L2 LINE L2 0 3313 2276 1769 199 0 0 chr2 196364833 196365135 -54322719 + AluJb SINE Alu 1 302 -10 1270 307 100 35 chr2 196365135 196365287 -54322567 - L2 LINE L2 -1037 2276 2135 550 221 121 10 chr2 196365288 196365487 -54322367 + MER58A DNA MER1_type 1 221 -3 672 93 0 0 chr2 196365598 196365695 -54322159 + (TTCC)n Simple_repeat Simple_repeat 1 97 0 2084 147 0 0 chr2 196365695 196366007 -54321847 - AluSx SINE Alu 0 312 1 22 99 0 0 chr2 196366143 196366214 -54321640 + AT_rich Low_complexity Low_complexity 1 71 0 22 70 0 0 chr2 196367872 196367915 -54319939 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 196368703 196368726 -54319128 + AT_rich Low_complexity Low_complexity 1 23 0 729 278 63 68 chr2 196369016 196369585 -54318269 + L1MCb LINE L1 3 568 -5477 1647 224 48 2 chr2 196369710 196370125 -54317729 - L1 LINE L1 -1518 4628 4195 738 189 76 5 chr2 196370144 196370329 -54317525 + L1 LINE L1 3760 3957 -2189 21 36 0 0 chr2 196370335 196370363 -54317491 + AT_rich Low_complexity Low_complexity 1 28 0 1666 232 32 42 chr2 196370543 196371048 -54316806 + MLT1D LTR MaLR 3 502 -3 386 307 26 53 chr2 196373795 196373984 -54313870 - MLT1I LTR MaLR -167 242 59 305 286 171 9 chr2 196374230 196374335 -54313519 + L2 LINE L2 3182 3303 -10 884 271 136 62 chr2 196374694 196375289 -54312565 - L1ME3A LINE L1 -27 6143 5505 387 289 102 21 chr2 196375333 196375520 -54312334 - MLT1H LTR MaLR -2 547 346 349 333 23 8 chr2 196375520 196375652 -54312202 - MLT1H LTR MaLR -411 138 5 516 278 114 48 chr2 196375663 196376843 -54311011 - L1ME3A LINE L1 -726 5444 4181 27 0 0 0 chr2 196377160 196377187 -54310667 + AT_rich Low_complexity Low_complexity 1 27 0 286 289 120 63 chr2 196377688 196377830 -54310024 - MIR SINE MIR -68 194 45 28 29 0 0 chr2 196377906 196377941 -54309913 + AT_rich Low_complexity Low_complexity 1 35 0 218 250 28 0 chr2 196378245 196378317 -54309537 + (TA)n Simple_repeat Simple_repeat 2 75 0 22 35 0 0 chr2 196379043 196379072 -54308782 + AT_rich Low_complexity Low_complexity 1 29 0 240 263 13 0 chr2 196379870 196379946 -54307908 + (TTG)n Simple_repeat Simple_repeat 2 78 0 23 0 0 0 chr2 196380301 196380324 -54307530 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr2 196380387 196380421 -54307433 + AT_rich Low_complexity Low_complexity 1 34 0 28 29 0 0 chr2 196380518 196380553 -54307301 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr2 196380870 196380912 -54306942 + AT_rich Low_complexity Low_complexity 1 42 0 512 318 41 9 chr2 196380991 196381211 -54306643 + L1MDa LINE L1 362 588 -6133 304 281 173 32 chr2 196381270 196381455 -54306399 + L1MDa LINE L1 959 1169 -5552 263 319 77 37 chr2 196381635 196381933 -54305921 + L1MC3 LINE L1 110 419 -6004 273 314 0 20 chr2 196382149 196382251 -54305603 + L1MC3 LINE L1 817 916 -5507 1614 277 107 34 chr2 196382379 196383565 -54304289 + L1MC3 LINE L1 1119 2217 -4724 1243 218 29 82 chr2 196383565 196383977 -54303877 - MLT1B LTR MaLR 0 390 1 1614 277 107 34 chr2 196383977 196384935 -54302919 + L1MC3 LINE L1 2217 3620 -3321 * 2481 254 63 39 chr2 196384929 196386630 -54301224 + L1MC3 LINE L1 5183 6192 -749 1127 231 95 16 chr2 196386658 196387334 -54300520 + L1MDa LINE L1 2206 2944 -3596 572 303 21 4 chr2 196387344 196387585 -54300269 + L1MDa LINE L1 3764 4008 -2532 337 269 45 30 chr2 196387622 196387823 -54300031 + L1MDa LINE L1 4137 4340 -2200 593 303 37 11 chr2 196387912 196388100 -54299754 - MIR SINE MIR -21 241 49 23 0 0 0 chr2 196388238 196388261 -54299593 + AT_rich Low_complexity Low_complexity 1 23 0 1427 94 0 0 chr2 196389107 196389288 -54298566 - AluSg SINE Alu -129 181 1 484 213 70 27 chr2 196389291 196389492 -54298362 - LTR25 LTR ERV1 -98 684 197 276 200 138 0 chr2 196389534 196389599 -54298255 - MER51A LTR ERV1 -353 281 208 470 170 42 0 chr2 196389772 196389882 -54297972 - MER61E LTR ERV1 -484 85 1 287 333 0 0 chr2 196389882 196389948 -54297906 - MER58 DNA MER1_type -269 72 7 361 287 51 15 chr2 196390884 196391030 -54296824 - MLT1H1 LTR MaLR 0 586 438 219 69 0 0 chr2 196391423 196391452 -54296402 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 317 164 30 0 chr2 196391462 196391529 -54296325 + CT-rich Low_complexity Low_complexity 3 71 0 527 295 30 75 chr2 196391855 196392095 -54295759 - MLT1H LTR MaLR -313 233 1 373 326 37 0 chr2 196392289 196392424 -54295430 - MIR SINE MIR -72 190 51 1676 303 72 56 chr2 196442938 196445250 -54242604 + L1MCc LINE L1 162 2712 -4410 1087 304 25 14 chr2 196445337 196446013 -54241841 + L1MCc LINE L1 2809 3459 -3482 282 56 0 0 chr2 196446184 196446220 -54241634 + (TATG)n Simple_repeat Simple_repeat 4 39 0 423 0 0 0 chr2 196446222 196446269 -54241585 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 12570 200 36 40 chr2 196446597 196447873 -54239981 + L1MA4 LINE L1 7 1287 -5195 2178 72 0 0 chr2 196447873 196448137 -54239717 + AluSx SINE Alu 42 305 -7 12570 200 36 40 chr2 196448137 196449704 -54238150 + L1MA4 LINE L1 1287 2860 -3622 1993 201 41 7 chr2 196449704 196450122 -54237732 + MSTB1 LTR MaLR 1 432 0 12570 200 36 40 chr2 196450122 196451903 -54235951 + L1MA4 LINE L1 2860 4647 -1835 1838 141 59 0 chr2 196451903 196452193 -54235661 + AluSx SINE Alu 1 307 -5 12570 200 36 40 chr2 196452193 196454087 -54233767 + L1MA4 LINE L1 4647 6477 -5 345 321 82 0 chr2 196455782 196455916 -54231938 - MIR SINE MIR -70 192 48 6894 171 161 29 chr2 196456126 196457677 -54230177 + MER52A LTR ERV1 1 1755 0 205 195 0 0 chr2 196458526 196458567 -54229287 + (TA)n Simple_repeat Simple_repeat 1 41 0 391 314 149 36 chr2 196459023 196459519 -54228335 - L1MEc LINE L1 -4675 1721 1170 32 43 0 0 chr2 196459543 196459589 -54228265 + AT_rich Low_complexity Low_complexity 1 46 0 331 253 91 0 chr2 196459722 196459821 -54228033 + L1PB4 LINE L1 6048 6155 -1 244 176 0 0 chr2 196460153 196460204 -54227650 + Alu SINE Alu 250 300 0 * 352 333 18 0 chr2 196460203 196460314 -54227540 + MER52A LTR ERV1 1120 1232 -523 943 266 34 0 chr2 196460357 196460620 -54227234 + MER58B DNA MER1_type 69 340 -1 302 238 180 8 chr2 196461408 196461530 -54226324 + MLT1H1 LTR MaLR 401 543 -12 199 407 51 8 chr2 196461826 196461944 -54225910 - L2 LINE L2 -40 3232 3110 21 36 0 0 chr2 196461955 196461983 -54225871 + AT_rich Low_complexity Low_complexity 1 28 0 25341 32 0 1 chr2 196462259 196466105 -54221749 - L1PA3 LINE L1 0 6155 2313 757 42 0 0 chr2 196466105 196466200 -54221654 + L1PA3 LINE L1 2219 2313 -3833 357 268 0 21 chr2 196466351 196466448 -54221406 + MER81 DNA DNA 16 110 -4 1814 177 34 3 chr2 196468131 196468459 -54219395 - L1MC1 LINE L1 -30 6303 5966 440 290 18 39 chr2 196468459 196468738 -54219116 + L1M4 LINE L1 3273 3545 -2601 1306 288 52 5 chr2 196468755 196469345 -54218509 + L1M4 LINE L1 3849 4466 -1680 2708 10 0 3 chr2 196469353 196469659 -54218195 - AluYa5 SINE Alu -6 305 1 23 0 0 0 chr2 196469860 196469883 -54217971 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 196470698 196470723 -54217131 + AT_rich Low_complexity Low_complexity 1 25 0 1816 223 101 8 chr2 196471312 196471828 -54216026 - MER63C DNA MER1_type -320 610 47 1719 163 65 39 chr2 196471838 196472193 -54215661 - THE1B LTR MaLR 0 364 1 288 228 6 7 chr2 196472223 196472311 -54215543 - L1MC1 LINE L1 -335 5786 5718 573 208 31 0 chr2 196472343 196472473 -54215381 - MER58B DNA MER1_type -5 336 203 1634 203 10 65 chr2 196472547 196472960 -54214894 - MLT1B LTR MaLR 0 390 1 232 368 8 0 chr2 196473043 196473160 -54214694 - L1MC1 LINE L1 -654 5508 5391 185 276 134 31 chr2 196473838 196473965 -54213889 + MIR SINE MIR 122 261 -1 1092 236 52 46 chr2 196474546 196474893 -54212961 - MLT1A1 LTR MaLR 0 365 17 21 36 0 0 chr2 196475287 196475315 -54212539 + AT_rich Low_complexity Low_complexity 1 28 0 1254 245 121 79 chr2 196475944 196476034 -54211820 - MER77 LTR ERV1 -11 594 509 198 71 0 0 chr2 196476034 196476062 -54211792 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1254 245 121 79 chr2 196476062 196476502 -54211352 - MER77 LTR ERV1 -96 509 42 2169 159 23 58 chr2 196476986 196477421 -54210433 + MSTB LTR MaLR 7 426 0 208 200 50 12 chr2 196477481 196477561 -54210293 + (TCTA)n Simple_repeat Simple_repeat 1 83 0 354 179 15 0 chr2 196477573 196477640 -54210214 + L1MC4 LINE L1 7969 8036 -6 32 26 0 0 chr2 196477756 196477795 -54210059 + AT_rich Low_complexity Low_complexity 1 39 0 2224 16 0 0 chr2 196477890 196478148 -54209706 + L1PA2 LINE L1 5895 6152 -3 13792 146 42 7 chr2 196478174 196480487 -54207367 + Tigger1 DNA MER2_type 24 2418 0 46 74 0 0 chr2 196480784 196480879 -54206975 + AT_rich Low_complexity Low_complexity 1 95 0 24 91 0 0 chr2 196481013 196481079 -54206775 + AT_rich Low_complexity Low_complexity 1 66 0 2677 171 24 57 chr2 196481217 196481762 -54206092 + Tigger7 DNA MER2_type 1 527 -206 514 157 9 74 chr2 196481737 196481845 -54206009 + Tigger7 DNA MER2_type 2391 2491 0 * 459 316 107 56 chr2 196482002 196482353 -54205501 + L2 LINE L2 2853 3226 -87 1831 151 12 6 chr2 196482353 196482677 -54205177 - L1PA16 LINE L1 0 6166 5841 459 316 107 56 chr2 196482677 196482699 -54205155 + L2 LINE L2 3226 3245 -68 255 357 0 0 chr2 196482712 196482796 -54205058 + L2 LINE L2 3216 3299 -14 452 232 149 0 chr2 196482800 196483008 -54204846 + L1ME LINE L1 5209 5443 -727 721 317 100 8 chr2 196483109 196483413 -54204441 + Zaphod DNA AcHobo 240 589 -3442 * 777 160 14 7 chr2 196483406 196483550 -54204304 + MER115 DNA AcHobo 549 693 0 403 63 32 0 chr2 196483581 196483644 -54204210 + (TA)n Simple_repeat Simple_repeat 2 66 0 201 147 0 0 chr2 196483649 196483683 -54204171 + (CA)n Simple_repeat Simple_repeat 1 34 0 2615 40 0 0 chr2 196483752 196484056 -54203798 + AluY SINE Alu 1 304 -7 25 51 0 0 chr2 196484119 196484158 -54203696 + AT_rich Low_complexity Low_complexity 1 39 0 352 343 117 22 chr2 196484316 196484718 -54203136 + L1MC/D LINE L1 5376 5815 -1993 210 171 0 0 chr2 196485474 196485515 -54202339 + CT-rich Low_complexity Low_complexity 2 42 0 200 182 0 45 chr2 196485567 196485611 -54202243 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 1760 132 89 0 chr2 196485787 196486067 -54201787 + AluSc SINE Alu 1 305 -4 341 184 0 13 chr2 196486067 196486143 -54201711 + GA-rich Low_complexity Low_complexity 2 76 0 * 830 107 13 49 chr2 196486141 196486383 -54201471 + (GAAA)n Simple_repeat Simple_repeat 1 233 0 1246 190 0 100 chr2 196486385 196486757 -54201097 + AluJb SINE Alu 3 343 0 586 234 0 0 chr2 196488170 196488298 -54199556 - MER94 DNA DNA -6 128 1 290 301 32 49 chr2 196488703 196488826 -54199028 + MER94 DNA DNA 1 121 -13 21 0 0 0 chr2 196489415 196489436 -54198418 + AT_rich Low_complexity Low_complexity 1 21 0 2656 13 3 0 chr2 196489593 196489891 -54197963 + AluYa5 SINE Alu 1 299 -12 4328 27 0 0 chr2 196490260 196490786 -54197068 - L1PA2 LINE L1 -743 5403 4878 6628 13 0 0 chr2 196490786 196491531 -54196323 + L1PA2 LINE L1 5399 6152 -3 180 158 0 0 chr2 196491538 196491576 -54196278 + A-rich Low_complexity Low_complexity 1 38 0 3215 209 33 1 chr2 196492138 196492833 -54195021 + LTR62 LTR ERVK 1 717 -2 26 0 0 0 chr2 196493104 196493130 -54194724 + AT_rich Low_complexity Low_complexity 1 26 0 246 140 160 0 chr2 196493416 196493466 -54194388 - MER103 DNA DNA -55 111 54 228 339 45 27 chr2 196493825 196493937 -54193917 + AluYa5 SINE Alu 155 268 -33 1517 297 94 13 chr2 196494497 196495177 -54192677 - L1ME3A LINE L1 -14 6090 5356 35 63 0 0 chr2 196495192 196495255 -54192599 + AT_rich Low_complexity Low_complexity 1 63 0 263 321 18 0 chr2 196495357 196495469 -54192385 + (TA)n Simple_repeat Simple_repeat 2 115 0 379 250 94 10 chr2 196495486 196495678 -54192176 - L1ME3A LINE L1 -931 5149 4942 300 276 55 63 chr2 196495837 196495964 -54191890 - MIR SINE MIR -81 181 56 722 331 108 30 chr2 196496519 196497318 -54190536 + L2 LINE L2 2402 3313 0 245 235 94 0 chr2 196497633 196497718 -54190136 - L1ME3A LINE L1 -3932 2148 2056 405 320 111 34 chr2 196497741 196498094 -54189760 - L1ME3A LINE L1 -4692 1388 1009 958 272 77 97 chr2 196498148 196499024 -54188830 - L1ME3A LINE L1 -5196 874 17 317 361 37 0 chr2 196499507 196499615 -54188239 - L2 LINE L2 -5 3267 3156 2092 224 14 8 chr2 196501090 196501832 -54186022 + L1MC1 LINE L1 4783 5532 -743 4116 187 20 1 chr2 196502047 196502842 -54185012 + L1MC1 LINE L1 5523 6332 -1 260 354 57 38 chr2 196503103 196503261 -54184593 - L2 LINE L2 -2105 1209 1049 21 0 0 0 chr2 196503434 196503455 -54184399 + AT_rich Low_complexity Low_complexity 1 21 0 33 25 0 0 chr2 196504005 196504045 -54183809 + AT_rich Low_complexity Low_complexity 1 40 0 273 75 0 0 chr2 196505814 196505854 -54182000 + (TG)n Simple_repeat Simple_repeat 2 41 0 1864 249 26 9 chr2 196505931 196506464 -54181390 - L1ME1 LINE L1 -124 6042 5501 29 70 0 0 chr2 196506930 196506987 -54180867 + AT_rich Low_complexity Low_complexity 1 57 0 290 207 0 17 chr2 196507070 196507128 -54180726 + Charlie4a DNA MER1_type 1 57 -451 609 302 22 49 chr2 196507133 196507358 -54180496 + MLT1H1 LTR MaLR 13 231 -324 269 243 107 30 chr2 196507399 196507579 -54180275 + MLT1G1 LTR MaLR 343 595 0 1044 269 40 7 chr2 196507582 196508006 -54179848 + Charlie4a DNA MER1_type 65 502 -6 234 227 160 0 chr2 196508501 196508576 -54179278 - MLT1I LTR MaLR -3 406 320 21 0 0 0 chr2 196509494 196509515 -54178339 + AT_rich Low_complexity Low_complexity 1 21 0 267 216 91 45 chr2 196509740 196509828 -54178026 + L2 LINE L2 3216 3307 -6 21 89 0 0 chr2 196510899 196510955 -54176899 + AT_rich Low_complexity Low_complexity 1 56 0 228 341 0 0 chr2 196511771 196511853 -54176001 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 29 0 0 0 chr2 196512286 196512315 -54175539 + AT_rich Low_complexity Low_complexity 1 29 0 22 70 0 0 chr2 196512381 196512424 -54175430 + AT_rich Low_complexity Low_complexity 1 43 0 373 96 0 0 chr2 196512435 196512487 -54175367 - MSTD LTR MaLR 0 396 345 1235 209 62 22 chr2 196512501 196512774 -54175080 + AluJo SINE Alu 6 289 -23 1404 220 69 6 chr2 196512774 196513092 -54174762 - MSTD LTR MaLR -58 338 1 29 78 0 0 chr2 196513177 196513241 -54174613 + AT_rich Low_complexity Low_complexity 1 64 0 25 0 0 0 chr2 196513557 196513582 -54174272 + AT_rich Low_complexity Low_complexity 1 25 0 238 351 67 22 chr2 196515025 196515159 -54172695 - MLT1I LTR MaLR -90 319 180 29 0 0 0 chr2 196515437 196515466 -54172388 + AT_rich Low_complexity Low_complexity 1 29 0 838 196 51 28 chr2 196516368 196516582 -54171272 - MLT1D LTR MaLR 0 505 287 1558 195 87 50 chr2 196516626 196517062 -54170792 - LTR48 LTR ERV1 -3 784 333 2476 160 25 91 chr2 196517064 196517671 -54170183 - LTR8 LTR ERV1 -124 567 1 1312 198 70 17 chr2 196517671 196517969 -54169885 - LTR48 LTR ERV1 -473 314 1 2139 110 7 3 chr2 196518168 196518467 -54169387 + AluSx SINE Alu 3 302 -10 183 351 54 27 chr2 196519412 196519486 -54168368 + L2 LINE L2 3143 3218 -54 686 252 69 69 chr2 196520111 196520472 -54167382 - MLT1B LTR MaLR -8 382 22 254 302 0 23 chr2 196520982 196521068 -54166786 + HAL1b LINE L1 373 456 -892 23 0 0 0 chr2 196521178 196521201 -54166653 + AT_rich Low_complexity Low_complexity 1 23 0 858 285 21 45 chr2 196521278 196521566 -54166288 + MLT1F LTR MaLR 186 466 -76 24 32 0 0 chr2 196521645 196521676 -54166178 + AT_rich Low_complexity Low_complexity 1 31 0 8893 73 15 98 chr2 196521770 196523282 -54164572 + SVA Other Other 1 1386 0 374 295 42 79 chr2 196523373 196523614 -54164240 + L1MC2 LINE L1 668 899 -5524 23 68 0 0 chr2 196523672 196523716 -54164138 + AT_rich Low_complexity Low_complexity 1 44 0 2481 242 62 21 chr2 196523855 196525063 -54162791 + L1MC2 LINE L1 5140 6392 -747 510 208 32 40 chr2 196525043 196525168 -54162686 + L1MC2 LINE L1 6972 7095 -44 * 2379 70 3 0 chr2 196525570 196525871 -54161983 + AluY SINE Alu 3 304 -7 348 327 28 47 chr2 196525927 196526181 -54161673 + L1M4 LINE L1 3530 3778 -2368 198 143 0 0 chr2 196526191 196526226 -54161628 + (TG)n Simple_repeat Simple_repeat 2 36 0 453 290 104 36 chr2 196526611 196526946 -54160908 + L1M4 LINE L1 4894 5251 -895 3102 196 38 84 chr2 196527300 196528201 -54159653 - MER21B LTR ERV1 -4 859 1 347 106 100 0 chr2 196529076 196529236 -54158618 + (TA)n Simple_repeat Simple_repeat 2 177 0 229 267 12 23 chr2 196529250 196529336 -54158518 + (TA)n Simple_repeat Simple_repeat 1 85 0 2410 209 5 23 chr2 196531077 196531632 -54156222 - L1P LINE L1 -1126 5723 5179 1316 247 24 7 chr2 196531632 196532113 -54155741 - L1PA15-16 LINE L1 -3693 3156 2662 726 300 95 9 chr2 196532113 196532450 -54155404 - Charlie7 DNA MER1_type -2209 403 38 353 180 0 0 chr2 196532550 196532611 -54155243 - L1M2 LINE L1 -4282 2567 2507 * 4448 162 44 28 chr2 196532606 196533733 -54154121 + L1PA16 LINE L1 5016 6163 -3 21 0 0 0 chr2 196534214 196534235 -54153619 + AT_rich Low_complexity Low_complexity 1 21 0 3963 74 8 0 chr2 196534242 196534766 -54153088 - L1P3 LINE L1 -373 5799 5272 752 298 31 31 chr2 196534766 196535155 -54152699 - Charlie7 DNA MER1_type -794 1818 1430 694 302 165 15 chr2 196535310 196535717 -54152137 - Charlie7 DNA MER1_type -2087 525 58 310 282 73 9 chr2 196535935 196536045 -54151809 - MIR SINE MIR -111 151 35 427 271 85 0 chr2 196536049 196536178 -54151676 + MIR SINE MIR 122 261 -1 212 270 0 27 chr2 196536476 196536527 -54151327 + GA-rich Low_complexity Low_complexity 2 52 -21 2375 80 3 6 chr2 196536527 196536838 -54151016 + AluY SINE Alu 1 310 -1 212 270 0 27 chr2 196536838 196536860 -54150994 + GA-rich Low_complexity Low_complexity 52 73 0 1512 135 143 8 chr2 196537721 196537987 -54149867 - AluSx SINE Alu -10 302 1 287 284 49 10 chr2 196538070 196538172 -54149682 + MIR SINE MIR 144 249 -13 28 61 0 0 chr2 196539660 196539709 -54148145 + AT_rich Low_complexity Low_complexity 1 49 0 1549 202 49 0 chr2 196540024 196540351 -54147503 - MER2 DNA MER2_type 0 344 2 22 80 0 0 chr2 196540685 196540735 -54147119 + AT_rich Low_complexity Low_complexity 1 50 0 1868 206 93 3 chr2 196541090 196541478 -54146376 + L1M1 LINE L1 1687 2109 -5456 * 6066 144 22 10 chr2 196541467 196542103 -54145751 + L1MA2 LINE L1 5114 5771 -533 1972 127 111 15 chr2 196542103 196542435 -54145419 - THE1B LTR MaLR 0 364 1 6066 144 22 10 chr2 196542435 196542976 -54144878 + L1MA2 LINE L1 5771 6304 0 1719 203 139 20 chr2 196543327 196543816 -54144038 - LTR10A LTR ERV1 -62 547 1 1202 188 196 21 chr2 196543972 196544060 -54143794 + LTR7 LTR ERV1 1 72 -378 6997 20 0 0 chr2 196544060 196544865 -54142989 + L1PA3 LINE L1 5351 6155 0 1202 188 196 21 chr2 196544865 196545159 -54142695 + LTR7 LTR ERV1 72 450 0 607 244 132 95 chr2 196545168 196545530 -54142324 + HAL1 LINE L1 1705 2052 -455 695 242 50 22 chr2 196545530 196545712 -54142142 - MER5A DNA MER1_type -2 187 1 607 244 132 95 chr2 196545712 196545942 -54141912 + HAL1 LINE L1 2052 2330 -177 2235 104 0 3 chr2 196545942 196546230 -54141624 - AluSp SINE Alu -24 289 3 607 244 132 95 chr2 196546230 196546342 -54141512 + HAL1 LINE L1 2330 2436 -71 960 205 91 16 chr2 196546359 196546613 -54141241 + MER82 DNA MER2_type 360 632 -21 2663 98 74 5 chr2 196546617 196547036 -54140818 + LTR7 LTR ERV1 1 448 -2 14941 104 17 16 chr2 196547038 196549785 -54138069 + HERVH LTR ERV1 1 2992 -4721 5862 93 9 7 chr2 196549771 196550623 -54137231 + HERVH LTR ERV1 3140 3993 -3720 * 1269 100 16 0 chr2 196550625 196550815 -54137039 + HERVH LTR ERV1 4488 4680 -3033 * 13412 89 17 9 chr2 196550801 196552730 -54135124 + HERVH LTR ERV1 5769 7713 0 2645 86 74 19 chr2 196552730 196553150 -54134704 + LTR7 LTR ERV1 1 443 -7 185 346 22 44 chr2 196553190 196553372 -54134482 + L2 LINE L2 2206 2383 -931 37105 97 9 7 chr2 196553482 196559606 -54128248 - L1PA6 LINE L1 -3 6151 13 359 407 13 26 chr2 196559646 196559872 -54127982 + L2 LINE L2 2851 3073 -199 2017 218 42 42 chr2 196560730 196561517 -54126337 - L1M4 LINE L1 -404 6591 5815 5663 170 52 5 chr2 196561533 196563679 -54124175 - L1MA3 LINE L1 0 7724 5482 14132 170 60 9 chr2 196563684 196565944 -54121910 - L1MA3 LINE L1 -3457 4108 1647 213 39 0 0 chr2 196565944 196565970 -54121884 + (TC)n Simple_repeat Simple_repeat 2 27 0 14132 170 60 9 chr2 196565970 196566775 -54121079 - L1MA3 LINE L1 -5918 1647 885 1716 203 12 6 chr2 196566779 196567100 -54120754 - L1MA3 LINE L1 -7231 334 12 4268 253 70 83 chr2 196567346 196569010 -54118844 - L1M4 LINE L1 -1918 5039 3354 2134 208 13 77 chr2 196569010 196569636 -54118218 - LTR60 LTR ERV1 0 586 1 4268 253 70 83 chr2 196569636 196572981 -54114873 - L1M4 LINE L1 -3603 3354 103 22 56 0 0 chr2 196574958 196574994 -54112860 + AT_rich Low_complexity Low_complexity 1 36 0 249 260 55 0 chr2 196575064 196575137 -54112717 + MIR SINE MIR 159 235 -27 192 40 0 0 chr2 196575494 196575519 -54112335 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 252 234 53 64 chr2 196575810 196575904 -54111950 - MLT1J2 LTR MaLR -277 173 81 309 296 151 27 chr2 196576051 196576237 -54111617 + L1ME LINE L1 5508 5716 -405 444 285 127 46 chr2 196576807 196577130 -54110724 + LTR40a LTR ERVL 122 470 -49 2047 173 9 3 chr2 196577602 196577948 -54109906 - MER7A DNA MER2_type 0 346 1 21 0 0 0 chr2 196578939 196578960 -54108894 + AT_rich Low_complexity Low_complexity 1 21 0 323 300 20 67 chr2 196579086 196579236 -54108618 + MIR SINE MIR 33 175 -87 258 32 0 0 chr2 196579785 196579816 -54108038 + (TG)n Simple_repeat Simple_repeat 2 32 0 394 77 0 0 chr2 196579824 196579876 -54107978 - AluSq SINE Alu -67 236 185 585 121 11 0 chr2 196579876 196579967 -54107887 - AluSq SINE Alu -220 92 1 977 136 71 10 chr2 196580414 196580612 -54107242 + Tigger2 DNA MER2_type 1 210 -2508 608 175 10 160 chr2 196580587 196580793 -54107061 + Tigger2 DNA MER2_type 2534 2708 -10 * 239 202 11 45 chr2 196581043 196581132 -54106722 + (TA)n Simple_repeat Simple_repeat 1 86 0 214 365 27 0 chr2 196582202 196582276 -54105578 + MER5A DNA MER1_type 64 139 -50 277 351 26 0 chr2 196582363 196582440 -54105414 + L2 LINE L2 3168 3246 -26 201 325 39 58 chr2 196582849 196583003 -54104851 - MIR SINE MIR -106 156 6 422 203 27 54 chr2 196583115 196583263 -54104591 - L1MA10 LINE L1 -3 6331 6188 2186 99 7 10 chr2 196583269 196583573 -54104281 - AluSx SINE Alu -9 303 1 1767 250 93 38 chr2 196583627 196584258 -54103596 - L1ME1 LINE L1 -162 6502 5908 2292 69 10 7 chr2 196584258 196584546 -54103308 - AluY SINE Alu -22 289 1 1767 250 93 38 chr2 196584546 196585357 -54102497 - L1ME1 LINE L1 -756 5908 4965 339 318 55 27 chr2 196585470 196585690 -54102164 - L1ME1 LINE L1 -6262 280 55 2323 86 0 7 chr2 196586052 196586354 -54101500 + AluY SINE Alu 1 300 -11 4790 88 138 1 chr2 196586628 196587355 -54100499 - LTR12 LTR ERV1 0 826 1 813 235 10 41 chr2 196587390 196587586 -54100268 + MLT1A1 LTR MaLR 1 190 -175 629 205 0 41 chr2 196588101 196588223 -54099631 - FLAM_A SINE Alu -16 117 1 22 35 0 0 chr2 196588301 196588330 -54099524 + AT_rich Low_complexity Low_complexity 1 29 0 253 335 120 14 chr2 196589369 196589558 -54098296 - MIR SINE MIR -5 203 1 575 298 86 60 chr2 196589618 196590081 -54097773 + MLT1J LTR MaLR 1 475 -36 2249 181 31 27 chr2 196590998 196591480 -54096374 - MER66B LTR ERV1 0 486 3 2524 58 0 0 chr2 196592954 196593263 -54094591 - AluY SINE Alu -2 309 1 219 382 44 15 chr2 196593342 196593478 -54094376 + MIR3 SINE MIR 4 143 -65 25 31 0 0 chr2 196594430 196594462 -54093392 + AT_rich Low_complexity Low_complexity 1 32 0 216 0 0 0 chr2 196595416 196595440 -54092414 + (TG)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr2 196595850 196595871 -54091983 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 196596686 196596707 -54091147 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 196597953 196597982 -54089872 + AT_rich Low_complexity Low_complexity 1 29 0 27 49 0 0 chr2 196598671 196598712 -54089142 + AT_rich Low_complexity Low_complexity 1 41 0 25 31 0 0 chr2 196600025 196600057 -54087797 + AT_rich Low_complexity Low_complexity 1 32 0 292 258 0 0 chr2 196600427 196600493 -54087361 + MLT1K LTR MaLR 168 233 -355 27 0 0 0 chr2 196601096 196601123 -54086731 + AT_rich Low_complexity Low_complexity 1 27 0 26 50 0 0 chr2 196601151 196601191 -54086663 + AT_rich Low_complexity Low_complexity 1 40 0 2886 121 5 5 chr2 196602033 196602464 -54085390 + MER57B LTR ERV1 1 431 -3 1745 146 190 11 chr2 196602537 196602900 -54084954 + MSTA LTR MaLR 1 428 0 2724 13 0 0 chr2 196603079 196603385 -54084469 + AluY SINE Alu 1 306 -5 2610 185 24 16 chr2 196604255 196604762 -54083092 - MLT2B2 LTR ERVL -4 511 1 252 286 52 0 chr2 196604763 196604840 -54083014 + MLT1L LTR MaLR 463 543 -72 200 220 203 51 chr2 196605133 196605251 -54082603 + L2 LINE L2 3137 3272 0 186 321 83 12 chr2 196605616 196605700 -54082154 - L2 LINE L2 -5 3267 3178 183 100 0 0 chr2 196605735 196605765 -54082089 + (TAAAAA)n Simple_repeat Simple_repeat 4 33 0 2065 135 0 3 chr2 196606097 196606400 -54081454 + AluSx SINE Alu 1 302 -10 441 247 96 21 chr2 196607824 196608042 -54079812 - MER106B DNA MER1_type 0 1059 1 21 0 0 0 chr2 196609164 196609185 -54078669 + AT_rich Low_complexity Low_complexity 1 21 0 2230 104 3 3 chr2 196609224 196609532 -54078322 + AluSq SINE Alu 1 308 -5 213 211 35 0 chr2 196609733 196609790 -54078064 + A-rich Low_complexity Low_complexity 3 61 0 2105 117 0 0 chr2 196609890 196610197 -54077657 - AluSc SINE Alu 0 307 1 209 191 32 16 chr2 196610583 196610646 -54077208 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 21 0 0 0 chr2 196610866 196610887 -54076967 + AT_rich Low_complexity Low_complexity 1 21 0 1956 81 21 0 chr2 196612166 196612449 -54075405 + L1PA7 LINE L1 5865 6153 -1 687 230 105 52 chr2 196613416 196613760 -54074094 - L1ME2 LINE L1 -12 6152 5791 297 229 78 30 chr2 196613748 196613914 -54073940 - L1ME2 LINE L1 -888 5445 5272 * 626 265 118 52 chr2 196613956 196614556 -54073298 - L1ME2 LINE L1 -861 5285 4646 1159 187 42 69 chr2 196614556 196614845 -54073009 - LTR47A LTR ERVL 0 452 172 362 167 0 0 chr2 196614850 196614910 -54072944 - LTR47A LTR ERVL -392 60 1 412 230 93 19 chr2 196614911 196615072 -54072782 - L1ME2 LINE L1 -1497 4649 4477 284 296 51 23 chr2 196615152 196615328 -54072526 - L1ME2 LINE L1 -1834 4312 4132 295 219 0 49 chr2 196665329 196665452 -54022402 - L1M2 LINE L1 -3990 2859 2743 * 622 172 26 0 chr2 196665430 196665581 -54022273 - L1M2 LINE L1 -4965 1884 1730 4933 225 39 7 chr2 196665602 196666687 -54021167 + MST-int LTR MaLR 370 1488 -163 313 285 99 43 chr2 196668084 196668337 -54019517 - HAL1b LINE L1 -620 728 462 704 244 45 23 chr2 196669399 196669575 -54018279 + MLT1E2 LTR MaLR 358 537 -89 2857 233 44 27 chr2 196669577 196670496 -54017358 + L1ME1 LINE L1 5224 6162 -4 53 69 0 0 chr2 196670677 196670779 -54017075 + AT_rich Low_complexity Low_complexity 1 102 0 21 0 0 0 chr2 196671119 196671140 -54016714 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 196671314 196671335 -54016519 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 196671435 196671460 -54016394 + AT_rich Low_complexity Low_complexity 1 25 0 1897 162 0 0 chr2 196672740 196673036 -54014818 + AluSx SINE Alu 1 296 -16 1050 242 119 26 chr2 196674068 196674638 -54013216 + L1MEc LINE L1 771 1393 -5003 1055 256 107 40 chr2 196674735 196675364 -54012490 + L1MEc LINE L1 1597 2267 -4129 204 85 0 85 chr2 196675492 196675551 -54012303 + (TA)n Simple_repeat Simple_repeat 1 54 0 937 220 168 86 chr2 196678845 196679281 -54008573 + MER66A LTR ERV1 100 468 -10 269 247 0 11 chr2 196679319 196679412 -54008442 + (TA)n Simple_repeat Simple_repeat 2 93 0 1544 214 23 0 chr2 196679675 196679979 -54007875 - MER66A LTR ERV1 -162 316 6 23 33 0 0 chr2 196681768 196681798 -54006056 + AT_rich Low_complexity Low_complexity 1 30 0 421 333 85 59 chr2 196682300 196682690 -54005164 - HAL1 LINE L1 -932 1575 1176 29 47 0 0 chr2 196682947 196682990 -54004864 + AT_rich Low_complexity Low_complexity 1 43 0 211 188 42 0 chr2 196685203 196685251 -54002603 + T-rich Low_complexity Low_complexity 3 52 0 21 0 0 0 chr2 196685696 196685717 -54002137 + AT_rich Low_complexity Low_complexity 1 21 0 214 267 0 0 chr2 196685954 196685999 -54001855 + (CATA)n Simple_repeat Simple_repeat 2 46 0 249 196 20 0 chr2 196687031 196687082 -54000772 + MER20 DNA MER1_type 168 219 0 471 95 0 40 chr2 196687520 196687594 -54000260 + AluSg/x SINE Alu 212 282 -30 263 333 62 19 chr2 196687687 196687849 -54000005 + L1MEc LINE L1 1534 1702 -4694 237 189 0 19 chr2 196687878 196687931 -53999923 + A-rich Low_complexity Low_complexity 2 53 0 1098 207 14 0 chr2 196688048 196688256 -53999598 + MER2 DNA MER2_type 1 211 -134 195 114 0 0 chr2 196688268 196688303 -53999551 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 992 162 35 5 chr2 196688641 196688838 -53999016 - L1MA9 LINE L1 0 6312 6110 867 191 10 31 chr2 196688839 196689033 -53998821 - Tigger1 DNA MER2_type -1 2417 2228 5322 147 43 12 chr2 196689047 196690007 -53997847 - Tigger1 DNA MER2_type -409 2009 1021 7243 48 130 7 chr2 196690008 196691022 -53996832 - L1P LINE L1 -5007 1139 1 287 255 57 28 chr2 196691036 196691177 -53996677 - L1MEd LINE L1 -5033 1086 942 21 36 0 0 chr2 196691537 196691565 -53996289 + AT_rich Low_complexity Low_complexity 1 28 0 191 146 24 0 chr2 196691575 196691616 -53996238 + (TA)n Simple_repeat Simple_repeat 1 42 0 226 303 17 17 chr2 196691712 196691831 -53996023 - L1M4 LINE L1 -2005 4141 4023 265 224 40 13 chr2 196692191 196692267 -53995587 - MIR SINE MIR -103 159 82 188 409 94 0 chr2 196693158 196693307 -53994547 + MIR SINE MIR 48 210 -52 1909 148 3 6 chr2 196694312 196694623 -53993231 - AluSg SINE Alu 0 310 1 277 245 0 98 chr2 196694840 196694942 -53992912 + MER63 DNA MER1_type 7 724 -338 1783 198 59 37 chr2 196695824 196696284 -53991570 - L1MC4a LINE L1 -1 7807 7338 207 0 0 0 chr2 196697027 196697050 -53990804 + (TA)n Simple_repeat Simple_repeat 1 23 0 1533 175 45 53 chr2 196697276 196697654 -53990200 - THE1C LTR MaLR 0 375 1 260 301 199 58 chr2 196697711 196698093 -53989761 - LTR67 LTR ERVL -57 500 65 21 57 0 0 chr2 196698606 196698641 -53989213 + AT_rich Low_complexity Low_complexity 1 35 0 325 258 0 43 chr2 196699920 196700013 -53987841 - L1MC4 LINE L1 -1340 6702 6614 210 136 0 0 chr2 196700014 196700058 -53987796 + (TA)n Simple_repeat Simple_repeat 1 44 0 971 289 0 39 chr2 196701173 196701485 -53986369 + MLT1A2 LTR MaLR 75 374 0 199 307 71 36 chr2 196701957 196702097 -53985757 - L2 LINE L2 0 3313 3169 580 206 0 0 chr2 196702384 196702491 -53985363 + FLAM_C SINE Alu 1 107 -36 216 433 37 5 chr2 196702507 196702722 -53985132 - L2 LINE L2 -548 2766 2545 2149 130 3 0 chr2 196702771 196703072 -53984782 + AluSx SINE Alu 1 302 -10 1909 208 48 50 chr2 196703310 196703655 -53984199 + MLT1D LTR MaLR 3 348 -157 2307 159 9 49 chr2 196703655 196704101 -53983753 - MSTA LTR MaLR 0 428 1 1909 208 48 50 chr2 196704101 196704259 -53983595 + MLT1D LTR MaLR 348 505 0 1544 266 29 65 chr2 196704260 196704922 -53982932 + MLT1D-int LTR MaLR 2 639 -732 310 308 124 40 chr2 196705054 196705304 -53982550 + L2 LINE L2 2053 2323 -991 297 228 88 29 chr2 196706175 196706311 -53981543 - HAL1 LINE L1 -349 2158 2015 1723 166 107 78 chr2 196707164 196707611 -53980243 + MLT1C LTR MaLR 3 462 -5 225 299 75 9 chr2 196707802 196707909 -53979945 - HAL1b LINE L1 -437 911 798 2334 96 0 0 chr2 196708205 196708506 -53979348 + AluSg SINE Alu 1 301 -9 24 113 0 0 chr2 196708598 196708713 -53979141 + AT_rich Low_complexity Low_complexity 1 115 0 242 325 47 62 chr2 196708882 196709156 -53978698 - HAL1 LINE L1 -599 1908 1639 768 199 20 14 chr2 196710130 196710276 -53977578 + FRAM SINE Alu 1 146 -30 2576 179 32 11 chr2 196710368 196710922 -53976932 - L1MB3 LINE L1 -14 6169 5604 249 234 91 111 chr2 196711374 196711527 -53976327 + MIR SINE MIR 61 215 -47 231 36 0 0 chr2 196711528 196711556 -53976298 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1449 168 74 148 chr2 196712250 196712439 -53975415 + MLT1D LTR MaLR 10 211 -294 1892 121 16 13 chr2 196712439 196712744 -53975110 + AluY SINE Alu 1 306 -5 1449 168 74 148 chr2 196712744 196713041 -53974813 + MLT1D LTR MaLR 211 460 -45 255 81 0 27 chr2 196713141 196713178 -53974676 + MLT1D LTR MaLR 148 183 -322 2257 91 0 10 chr2 196713191 196713500 -53974354 + AluY SINE Alu 1 306 -5 1342 182 106 55 chr2 196713513 196713842 -53974012 + MLT1D LTR MaLR 160 505 0 2158 116 0 0 chr2 196714095 196714389 -53973465 + AluSc SINE Alu 1 294 -15 5030 149 59 36 chr2 196714817 196715819 -53972035 - L1MA9 LINE L1 0 6312 5288 1870 231 50 8 chr2 196716603 196717100 -53970754 - L1MD3 LINE L1 -25 7970 7453 606 257 82 36 chr2 196717109 196717395 -53970459 + L1MC3 LINE L1 6284 6583 -1225 1024 222 93 22 chr2 196717405 196717761 -53970093 - L1M4 LINE L1 -3169 3475 3095 1534 266 81 51 chr2 196717772 196718645 -53969209 - L1M4 LINE L1 -3608 3036 2191 462 18 0 0 chr2 196718645 196718700 -53969154 + (TATG)n Simple_repeat Simple_repeat 2 56 0 2177 98 0 3 chr2 196718700 196718987 -53968867 - AluSq SINE Alu -27 286 1 1534 266 81 51 chr2 196718987 196719094 -53968760 - L1M4 LINE L1 -4453 2191 2089 5812 133 19 22 chr2 196719094 196720066 -53967788 - LTR5 LTR ERVK 0 969 1 1534 266 81 51 chr2 196720066 196720461 -53967393 - L1M4 LINE L1 -4555 2089 1507 1129 173 111 102 chr2 196720474 196720897 -53966957 - MSTA LTR MaLR -1 427 1 373 109 0 0 chr2 196720926 196720981 -53966873 - L1MA4A LINE L1 -12 6291 6237 1250 105 0 17 chr2 196720981 196721162 -53966692 + THE1B LTR MaLR 187 364 0 9692 125 31 15 chr2 196721162 196722717 -53965137 + THE1B-int LTR MaLR 1 1580 0 2198 134 14 22 chr2 196722719 196723084 -53964770 + THE1B LTR MaLR 3 364 0 5482 190 34 15 chr2 196723086 196724790 -53963064 - L1MA4A LINE L1 -257 6046 4306 1643 168 111 21 chr2 196724790 196725124 -53962730 - THE1B LTR MaLR 0 364 1 5482 190 34 15 chr2 196725124 196725281 -53962573 - L1MA4A LINE L1 -1997 4306 4153 2036 266 41 22 chr2 196725266 196726063 -53961791 - L1MA4A LINE L1 -3335 2811 1993 * 274 294 69 56 chr2 196727584 196727744 -53960110 - MER5B DNA MER1_type 0 178 17 231 274 24 0 chr2 196728137 196728221 -53959633 - L1MA10 LINE L1 -8 6326 6241 360 0 0 0 chr2 196728229 196728269 -53959585 + (CA)n Simple_repeat Simple_repeat 2 41 0 449 294 32 5 chr2 196728297 196728622 -53959232 + L1MCa LINE L1 1523 1960 -4466 297 290 65 7 chr2 196728695 196728833 -53959021 + L1MCa LINE L1 2094 2239 -4368 533 282 112 32 chr2 196728922 196729325 -53958529 + L1MCa LINE L1 2394 2784 -3642 1795 292 47 29 chr2 196729409 196729613 -53958241 + L1MCa LINE L1 3569 3768 -2658 1892 189 116 10 chr2 196729613 196730000 -53957854 + MSTA LTR MaLR 1 428 0 8629 156 21 34 chr2 196730002 196731602 -53956252 + MSTA-int LTR MaLR 3 1580 0 1809 162 141 21 chr2 196731602 196731984 -53955870 + MSTA LTR MaLR 1 428 0 1795 292 47 29 chr2 196731984 196732728 -53955126 + L1MCa LINE L1 3768 4731 -1695 180 111 0 0 chr2 196732728 196732755 -53955099 + (CA)n Simple_repeat Simple_repeat 2 28 0 1795 292 47 29 chr2 196732755 196733068 -53954786 + L1MCa LINE L1 4731 5037 -1389 22 70 0 0 chr2 196733910 196733953 -53953901 + AT_rich Low_complexity Low_complexity 1 43 0 26 50 0 0 chr2 196734134 196734174 -53953680 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr2 196734682 196734703 -53953151 + AT_rich Low_complexity Low_complexity 1 21 0 246 286 16 8 chr2 196735076 196735202 -53952652 + (TA)n Simple_repeat Simple_repeat 2 128 0 22 56 0 0 chr2 196735458 196735494 -53952360 + AT_rich Low_complexity Low_complexity 1 36 0 432 118 0 0 chr2 196736119 196736187 -53951667 + (TTTA)n Simple_repeat Simple_repeat 2 69 0 1023 245 100 21 chr2 196737018 196737397 -53950457 + LTR52 LTR ERVL 3 411 -10 1246 242 30 30 chr2 196737397 196737760 -53950094 - MLT1A1 LTR MaLR 0 365 3 21 36 0 0 chr2 196738003 196738031 -53949823 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr2 196738928 196738967 -53948887 + AT_rich Low_complexity Low_complexity 1 39 0 21 57 0 0 chr2 196739176 196739211 -53948643 + AT_rich Low_complexity Low_complexity 1 35 0 372 256 0 0 chr2 196740338 196740424 -53947430 - L1MC4 LINE L1 -29 8013 7928 31 0 0 0 chr2 196741204 196741235 -53946619 + AT_rich Low_complexity Low_complexity 1 31 0 216 111 0 0 chr2 196742287 196742323 -53945531 + (TATATG)n Simple_repeat Simple_repeat 6 41 0 346 306 0 0 chr2 196742656 196742741 -53945113 - MER63A DNA MER1_type 0 210 126 2662 238 106 26 chr2 196743547 196744688 -53943166 - L1MD2 LINE L1 -502 6251 4977 1988 180 50 22 chr2 196744688 196745088 -53942766 - LTR57 LTR ERVL 0 411 1 2662 238 106 26 chr2 196745088 196745283 -53942571 - L1MD2 LINE L1 -1776 4977 4799 1905 270 53 14 chr2 196745340 196745848 -53942006 + MER76 LTR ERV 1 528 -160 3145 267 59 42 chr2 196745892 196746519 -53941335 - L1MD2 LINE L1 -1786 4754 4140 2050 127 0 0 chr2 196746519 196746810 -53941044 - AluSg SINE Alu -19 291 1 3145 267 59 42 chr2 196746810 196747934 -53939920 - L1MD2 LINE L1 -2400 4140 2972 471 261 50 53 chr2 196747950 196748233 -53939621 - L1MD2 LINE L1 -4042 2498 2217 557 302 174 28 chr2 196748238 196748669 -53939185 - L1MD2 LINE L1 -4367 2173 1680 1286 230 42 26 chr2 196748673 196749130 -53938724 - L1MD2 LINE L1 -5083 1460 997 573 335 26 46 chr2 196749971 196750359 -53937495 - L1MD2 LINE L1 -6155 385 6 22 70 0 0 chr2 196750658 196750701 -53937153 + AT_rich Low_complexity Low_complexity 1 43 0 24 32 0 0 chr2 196751059 196751090 -53936764 + AT_rich Low_complexity Low_complexity 1 31 0 843 186 80 4 chr2 196751768 196751994 -53935860 + L1MA8 LINE L1 6044 6286 -5 915 230 47 15 chr2 196753014 196753413 -53934441 - MER34 LTR ERV1 -1 541 78 295 269 141 26 chr2 196753416 196753572 -53934282 + L1MC/D LINE L1 5681 5854 -1954 262 164 73 0 chr2 196753584 196753639 -53934215 - MER34 LTR ERV1 -483 59 1 572 225 140 34 chr2 196753651 196753829 -53934025 - MER20 DNA MER1_type -1 218 22 2062 157 13 24 chr2 196753847 196754224 -53933630 - THE1C LTR MaLR -2 373 1 356 308 164 12 chr2 196754224 196754474 -53933380 - L1MC4a LINE L1 -1955 5853 5566 416 302 101 60 chr2 196755502 196755870 -53931984 - LTR33A LTR ERVL -24 499 117 239 330 21 21 chr2 196756147 196756244 -53931610 + L2 LINE L2 3195 3291 -22 180 111 0 0 chr2 196756250 196756277 -53931577 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 892 197 19 24 chr2 196756549 196756762 -53931092 - L1 LINE L1 -940 5206 4995 24 0 0 0 chr2 196757692 196757716 -53930138 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 196757994 196758019 -53929835 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 196758291 196758315 -53929539 + AT_rich Low_complexity Low_complexity 1 24 0 24 67 0 0 chr2 196760208 196760253 -53927601 + AT_rich Low_complexity Low_complexity 1 45 0 2814 251 106 29 chr2 196760311 196761262 -53926592 + L1M4c LINE L1 531 1554 -5476 1998 129 21 0 chr2 196761313 196761600 -53926254 + AluSc SINE Alu 1 293 -16 430 240 65 65 chr2 196761606 196761898 -53925956 + L1M4c LINE L1 2754 3045 -4063 7231 199 58 22 chr2 196761927 196765220 -53922634 + L1MA8 LINE L1 2986 6523 -4 1669 163 10 7 chr2 196766416 196766705 -53921149 - AluSx SINE Alu -18 294 5 201 377 0 0 chr2 196767059 196767136 -53920718 + MIR SINE MIR 177 253 -9 267 349 38 15 chr2 196767962 196768094 -53919760 + MIR3 SINE MIR 68 202 -6 23 0 0 0 chr2 196768343 196768366 -53919488 + AT_rich Low_complexity Low_complexity 1 23 0 24 67 0 0 chr2 196768780 196768825 -53919029 + AT_rich Low_complexity Low_complexity 1 45 0 2549 11 0 0 chr2 196769314 196769594 -53918260 - AluY SINE Alu -11 300 21 3867 239 49 26 chr2 196770446 196772407 -53915447 - L1MB5 LINE L1 -106 6304 4299 461 276 174 44 chr2 196772408 196772792 -53915062 - MLT1C LTR MaLR 0 467 34 1764 277 37 19 chr2 196772841 196773519 -53914335 - L1MB5 LINE L1 -2098 4284 3595 2118 151 83 12 chr2 196773541 196773969 -53913885 + MER4D LTR ERV1 1 196 -399 349 279 8 8 chr2 196773974 196774103 -53913751 - L1MB5 LINE L1 -3191 3191 3063 1438 215 14 4 chr2 196774113 196774392 -53913462 - MLT2B1 LTR ERVL -223 297 16 1315 259 15 20 chr2 196774392 196774883 -53912971 - L1MB5 LINE L1 -3472 2910 2423 1479 291 76 38 chr2 196774907 196776577 -53911277 - L1MEc LINE L1 -2535 4005 2263 283 275 60 30 chr2 196776705 196776872 -53910982 - L1MEc LINE L1 -4487 2143 1882 331 257 32 14 chr2 196777284 196777468 -53910386 + MER63D DNA MER1_type 193 441 -620 493 246 33 0 chr2 196777486 196777608 -53910246 + MER63D DNA MER1_type 935 1060 0 216 323 118 11 chr2 196778011 196778104 -53909750 - L2 LINE L2 -5 3267 3165 494 361 55 10 chr2 196778738 196779029 -53908825 + MLT1J2 LTR MaLR 1 304 -146 202 116 70 0 chr2 196779153 196779196 -53908658 + (TA)n Simple_repeat Simple_repeat 1 46 0 459 288 76 65 chr2 196779738 196780186 -53907668 + L1ME4a LINE L1 5617 6069 -52 396 352 91 0 chr2 196782297 196782527 -53905327 + MIR SINE MIR 12 262 0 1131 179 5 0 chr2 196783601 196783791 -53904063 - MER7A DNA MER2_type -136 210 22 * 1688 264 18 22 chr2 196783790 196784248 -53903606 + LTR40c LTR ERVL 7 462 -3 24 32 0 0 chr2 196784440 196784471 -53903383 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 196784636 196784659 -53903195 + AT_rich Low_complexity Low_complexity 1 23 0 243 61 0 0 chr2 196786260 196786293 -53901561 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 28 29 0 0 chr2 196787557 196787592 -53900262 + AT_rich Low_complexity Low_complexity 1 35 0 3432 271 72 25 chr2 196787808 196789067 -53898787 + L1M3de LINE L1 17 1475 -5178 231 211 183 0 chr2 196789058 196789129 -53898725 + L1M3de LINE L1 1900 1983 -4670 * 4908 270 42 58 chr2 196789171 196790930 -53896924 + L1MA4A LINE L1 4 1733 -5116 1883 193 61 17 chr2 196790931 196791341 -53896513 - MSTA LTR MaLR 0 428 1 6429 199 36 9 chr2 196791341 196792589 -53895265 - MSTA-int LTR MaLR 0 1651 370 622 172 26 0 chr2 196792610 196792761 -53895093 + L1MA4A LINE L1 1730 1884 -4965 * 5354 262 22 69 chr2 196792739 196795547 -53892307 + L1MA4A LINE L1 2743 5413 -1435 * 12528 24 0 0 chr2 196795544 196797026 -53890828 - L1PA3 LINE L1 -804 5342 3861 6721 34 0 0 chr2 196797026 196797822 -53890032 + L1PA3 LINE L1 5360 6155 0 3852 220 23 5 chr2 196797829 196799228 -53888626 + L1MA4A LINE L1 5398 6820 -185 288 200 0 31 chr2 196799235 196799300 -53888554 + L1MA4A LINE L1 6891 6953 -52 1515 157 68 3 chr2 196799324 196799618 -53888236 + MER65A LTR ERV1 107 419 -26 1232 202 30 0 chr2 196799636 196799869 -53887985 + AluJo SINE Alu 12 251 -61 332 189 27 0 chr2 196799874 196799948 -53887906 + MSTC LTR MaLR 353 428 0 1179 285 48 48 chr2 196799948 196800688 -53887166 - L1M1 LINE L1 -4298 2084 1257 1030 229 0 5 chr2 196800699 196800913 -53886941 - AluJo SINE Alu -13 299 87 5337 280 66 26 chr2 196800959 196802343 -53885511 - MSTD-int LTR MaLR -6 1729 267 1532 22 0 0 chr2 196802343 196802523 -53885331 + AluYb8 SINE Alu 138 317 -1 5337 280 66 26 chr2 196802523 196802798 -53885056 - MSTD-int LTR MaLR -1468 267 4 1308 249 52 29 chr2 196802804 196803189 -53884665 - MSTD LTR MaLR -2 394 1 2910 230 42 28 chr2 196803195 196804299 -53883555 + L1 LINE L1 3294 4422 -3143 396 153 41 31 chr2 196804298 196804396 -53883458 + L1 LINE L1 5925 6023 -1542 * 3647 138 25 25 chr2 196804400 196805053 -53882801 + L1PA16 LINE L1 5514 6166 0 2215 105 0 0 chr2 196805070 196805366 -53882488 - AluSx SINE Alu -15 297 2 1151 224 99 3 chr2 196805378 196805721 -53882133 + L1MC3 LINE L1 7380 7755 -30 22 56 0 0 chr2 196805737 196805773 -53882081 + AT_rich Low_complexity Low_complexity 1 36 0 218 203 8 102 chr2 196805947 196806065 -53881789 + A-rich Low_complexity Low_complexity 4 110 0 200 189 0 0 chr2 196806529 196806566 -53881288 + (CA)n Simple_repeat Simple_repeat 2 38 0 270 275 43 0 chr2 196808684 196808753 -53879101 - L2 LINE L2 -4 3309 3238 3677 153 36 4 chr2 196811320 196811995 -53875859 - L1MA4 LINE L1 -8 6292 5597 3111 181 40 5 chr2 196812000 196812574 -53875280 + MER6A DNA MER2_type 12 605 0 401 366 16 16 chr2 196812650 196812836 -53875018 - MIR SINE MIR -51 211 26 25 31 0 0 chr2 196812979 196813011 -53874843 + AT_rich Low_complexity Low_complexity 1 32 0 210 71 0 0 chr2 196813265 196813293 -53874561 + (TAA)n Simple_repeat Simple_repeat 2 29 0 30 27 0 0 chr2 196814536 196814573 -53873281 + AT_rich Low_complexity Low_complexity 1 37 0 342 326 109 1 chr2 196814599 196814728 -53873126 + MIR SINE MIR 21 157 -51 1139 327 69 50 chr2 196815203 196816030 -53871824 + L2 LINE L2 2253 3088 -225 1291 189 47 60 chr2 196818282 196818367 -53869487 - L1M4 LINE L1 -472 5702 5617 2132 121 0 3 chr2 196818367 196818672 -53869182 - AluSg SINE Alu -6 304 1 1291 189 47 60 chr2 196818672 196818951 -53868903 - L1M4 LINE L1 -557 5617 5343 204 233 35 35 chr2 196818979 196819065 -53868789 + (TAAA)n Simple_repeat Simple_repeat 3 88 0 279 320 46 25 chr2 196819137 196819334 -53868520 + L1ME LINE L1 5478 5678 -443 895 203 72 50 chr2 196819417 196819639 -53868215 + MSTC LTR MaLR 79 305 -123 780 141 50 0 chr2 196819644 196819765 -53868089 + FLAM_C SINE Alu 6 132 -11 580 168 0 28 chr2 196819778 196819885 -53867969 + MSTC LTR MaLR 321 424 -4 202 197 28 14 chr2 196819903 196819974 -53867880 + (TA)n Simple_repeat Simple_repeat 2 73 0 366 262 87 35 chr2 196820562 196820734 -53867120 - MIR SINE MIR -1 261 81 194 104 0 62 chr2 196821541 196821589 -53866265 + (TAAAAA)n Simple_repeat Simple_repeat 3 47 0 874 211 56 35 chr2 196821614 196821846 -53866008 + MLT1C LTR MaLR 1 237 -230 204 241 0 0 chr2 196821847 196821905 -53865949 + (CATA)n Simple_repeat Simple_repeat 3 60 0 249 167 24 0 chr2 196821958 196822000 -53865854 + MLT1C LTR MaLR 344 386 -4 625 184 0 0 chr2 196822019 196822133 -53865721 - MSTD LTR MaLR -282 114 1 471 35 0 0 chr2 196823049 196823106 -53864748 + (TA)n Simple_repeat Simple_repeat 1 57 0 3386 39 0 0 chr2 196823106 196823519 -53864335 - L1PA4 LINE L1 0 6155 5743 590 95 0 0 chr2 196825140 196825237 -53862617 + L1PA3 LINE L1 10 380 -6081 * 37224 34 27 1 chr2 196825204 196830639 -53857215 + L1PA3 LINE L1 893 6470 0 3062 121 0 11 chr2 196831077 196831541 -53856313 - L1PA13 LINE L1 -239 5929 5471 1706 104 0 8 chr2 196831541 196831776 -53856078 + L1PA13 LINE L1 5912 6159 -4 216 0 0 0 chr2 196832064 196832088 -53855766 + (CAAAT)n Simple_repeat Simple_repeat 1 24 0 262 183 28 0 chr2 196832357 196832428 -53855426 + (TA)n Simple_repeat Simple_repeat 2 74 0 26 30 0 0 chr2 196832582 196832615 -53855239 + AT_rich Low_complexity Low_complexity 1 33 0 26 30 0 0 chr2 196832682 196832715 -53855139 + AT_rich Low_complexity Low_complexity 1 33 0 234 0 0 0 chr2 196833637 196833663 -53854191 + (TTA)n Simple_repeat Simple_repeat 3 28 0 959 66 0 0 chr2 196833663 196833785 -53854069 - L1PA4 LINE L1 -18 6137 6016 400 176 24 0 chr2 196834341 196834426 -53853428 + MER61E LTR ERV1 1 87 -482 279 312 0 0 chr2 196834625 196834702 -53853152 + LTR28 LTR ERV1 147 223 -797 607 245 64 41 chr2 196834731 196835137 -53852717 + LTR25 LTR ERV1 350 1303 -10 919 201 0 26 chr2 196835958 196836147 -53851707 + MLT1A1 LTR MaLR 182 365 0 351 271 54 16 chr2 196836147 196836275 -53851579 - Charlie1a DNA MER1_type -1297 158 26 249 243 0 29 chr2 196838278 196838348 -53849506 - MARNA DNA Mariner -173 413 346 331 314 57 39 chr2 196839082 196839337 -53848517 + LTR16A LTR ERVL 187 456 -1 643 332 68 50 chr2 196839353 196839895 -53847959 + HERV16 LTR ERVL 18 574 -4422 3185 97 22 5 chr2 196839895 196840340 -53847514 + MLT2A2 LTR ERVL 1 453 0 643 332 68 50 chr2 196840340 196840415 -53847439 + HERV16 LTR ERVL 574 646 -4350 766 308 39 68 chr2 196840599 196841014 -53846840 + HERV16 LTR ERVL 930 1332 -3664 554 237 165 63 chr2 196841116 196841479 -53846375 + L1MEc LINE L1 1664 2063 -4333 1998 88 37 3 chr2 196841928 196842222 -53845632 + AluY SINE Alu 1 304 -7 194 240 87 87 chr2 196842370 196842474 -53845380 - MIR SINE MIR -41 221 118 370 291 139 18 chr2 196842834 196842999 -53844855 - L2 LINE L2 -6 3307 3123 215 242 129 0 chr2 196843230 196843292 -53844562 + MIR3 SINE MIR 92 161 -47 1212 168 12 52 chr2 196843325 196843575 -53844279 - AluJo SINE Alu -38 274 35 27 29 0 0 chr2 196843976 196844010 -53843844 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr2 196844045 196844068 -53843786 + AT_rich Low_complexity Low_complexity 1 23 0 1743 123 36 0 chr2 196844379 196844631 -53843223 + AluSc SINE Alu 48 308 -1 7191 57 9 1 chr2 196844873 196846625 -53841229 - L1PA8 LINE L1 -4 6168 4408 30 59 0 0 chr2 196846969 196847020 -53840834 + AT_rich Low_complexity Low_complexity 1 51 0 42766 32 22 1 chr2 196847412 196853440 -53834414 - L1HS LINE L1 0 6155 1 21 0 0 0 chr2 196854089 196854110 -53833744 + AT_rich Low_complexity Low_complexity 1 21 0 206 174 22 0 chr2 196854238 196854284 -53833570 + (TA)n Simple_repeat Simple_repeat 1 47 0 233 197 0 0 chr2 196854297 196854358 -53833496 - L1MC4 LINE L1 -1339 6703 6643 213 415 71 27 chr2 196855041 196855224 -53832630 - L2 LINE L2 -180 3092 2902 1935 129 26 7 chr2 196856326 196856628 -53831226 - AluSg SINE Alu 0 310 3 2108 84 7 7 chr2 196856769 196857066 -53830788 + L1PA7 LINE L1 5858 6154 0 26 0 0 0 chr2 196857168 196857194 -53830660 + AT_rich Low_complexity Low_complexity 1 26 0 325 306 36 0 chr2 196857293 196857404 -53830450 + MIR SINE MIR 139 253 -9 3356 220 40 18 chr2 196858860 196860318 -53827536 - L1MB7 LINE L1 -8 6987 5507 1331 219 61 150 chr2 196860318 196860925 -53826929 - MLT2B3 LTR ERVL 0 554 2 1587 250 77 21 chr2 196860955 196861682 -53826172 - L1MB7 LINE L1 -2734 4223 3456 26 50 0 0 chr2 196861871 196861911 -53825943 + AT_rich Low_complexity Low_complexity 1 40 0 1684 279 97 27 chr2 196861947 196862884 -53824970 - L1MB7 LINE L1 -4543 2416 1414 3590 189 95 23 chr2 196862884 196863671 -53824183 + MER21B LTR ERV1 1 844 -19 1720 318 55 11 chr2 196863716 196864383 -53823471 - L1MB7 LINE L1 -6023 836 140 22 0 0 0 chr2 196864411 196864433 -53823421 + AT_rich Low_complexity Low_complexity 1 22 0 1691 253 67 31 chr2 196864511 196864601 -53823253 - L1M4 LINE L1 -1834 4312 4227 345 47 0 0 chr2 196864601 196864644 -53823210 + (TG)n Simple_repeat Simple_repeat 2 44 0 1691 253 67 31 chr2 196864644 196865193 -53822661 - L1M4 LINE L1 -1919 4227 3650 34 65 0 0 chr2 196865218 196865280 -53822574 + AT_rich Low_complexity Low_complexity 1 62 0 21 0 0 0 chr2 196865928 196865949 -53821905 + AT_rich Low_complexity Low_complexity 1 21 0 588 342 53 44 chr2 196866000 196866436 -53821418 - L1MEd LINE L1 -5408 711 272 3393 217 60 12 chr2 196867076 196868013 -53819841 + L1MA10 LINE L1 3020 4001 -2145 2973 207 34 58 chr2 196868021 196869260 -53818594 + L1MA10 LINE L1 4626 5812 -522 2143 121 3 7 chr2 196869260 196869566 -53818288 + AluSc SINE Alu 1 305 -4 2973 207 34 58 chr2 196869566 196870076 -53817778 + L1MA10 LINE L1 5812 6333 -1 28 0 0 0 chr2 196871842 196871870 -53815984 + AT_rich Low_complexity Low_complexity 1 28 0 614 216 0 0 chr2 196872804 196872938 -53814916 + L1MA5A LINE L1 6161 6294 -3 23 0 0 0 chr2 196873161 196873184 -53814670 + AT_rich Low_complexity Low_complexity 1 23 0 1588 160 8 0 chr2 196873759 196874027 -53813827 - MER47A DNA MER2_type -23 343 74 2034 212 125 14 chr2 196874287 196874806 -53813048 - L1MC3 LINE L1 -17 7768 7192 238 231 66 44 chr2 196874816 196874907 -53812947 - MLT1H LTR MaLR -382 167 75 359 220 46 0 chr2 196874907 196875016 -53812838 - L1MC3 LINE L1 -692 7093 6980 1223 264 62 42 chr2 196875028 196875785 -53812069 - L1MCa LINE L1 -4849 1196 607 284 318 14 57 chr2 196875974 196876185 -53811669 - L1MCa LINE L1 -5803 761 560 785 251 77 107 chr2 196876422 196876760 -53811094 - L1MCa LINE L1 -5749 475 65 248 219 41 0 chr2 196876829 196876902 -53810952 - L1MCa LINE L1 -4355 2071 1996 263 260 0 30 chr2 196876913 196877013 -53810841 + L1MC4 LINE L1 6614 6710 -1332 286 341 29 41 chr2 196877013 196877183 -53810671 + MIR SINE MIR 94 261 -1 1579 208 56 3 chr2 196878045 196878386 -53809468 + MLT1B LTR MaLR 2 360 -30 438 218 0 0 chr2 196878490 196878600 -53809254 + C-rich Low_complexity Low_complexity 1 110 0 2089 121 7 0 chr2 196878654 196878961 -53808893 + AluSx SINE Alu 1 309 -3 225 132 0 0 chr2 196878966 196879004 -53808850 + (GAAA)n Simple_repeat Simple_repeat 3 40 0 499 316 5 19 chr2 196879007 196879222 -53808632 + L1M4 LINE L1 5366 5577 -597 23 86 0 0 chr2 196879464 196879522 -53808332 + AT_rich Low_complexity Low_complexity 1 58 0 212 133 89 22 chr2 196879692 196879737 -53808117 + L2 LINE L2 3264 3311 -2 512 300 37 16 chr2 196879794 196879984 -53807870 - MIR SINE MIR -1 261 68 267 114 0 0 chr2 196880004 196880048 -53807806 + (CA)n Simple_repeat Simple_repeat 2 45 0 23 0 0 0 chr2 196880499 196880522 -53807332 + AT_rich Low_complexity Low_complexity 1 23 0 1500 222 24 29 chr2 196880542 196880702 -53807152 + L1MC3 LINE L1 6705 6864 -921 186 103 0 0 chr2 196880702 196880731 -53807123 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1500 222 24 29 chr2 196880731 196880980 -53806874 + L1MC3 LINE L1 6864 7112 -673 278 194 28 69 chr2 196880984 196881056 -53806798 + MLT1F1 LTR MaLR 57 125 -442 578 170 27 0 chr2 196881062 196881174 -53806680 + L1MC3 LINE L1 7196 7310 -475 659 219 114 20 chr2 196881313 196881625 -53806229 + L1M4b LINE L1 1391 1906 -5232 893 203 6 16 chr2 196882242 196882424 -53805430 - FRAM SINE Alu -1 175 1 21 0 0 0 chr2 196883431 196883452 -53804402 + AT_rich Low_complexity Low_complexity 1 21 0 892 304 148 39 chr2 196883869 196884491 -53803363 + L2 LINE L2 1717 2406 -908 1490 214 68 28 chr2 196884493 196884932 -53802922 - MLT1C LTR MaLR -7 451 1 553 345 131 21 chr2 196884939 196885693 -53802161 + L2 LINE L2 2397 3313 0 2346 65 14 0 chr2 196886791 196887083 -53800771 + AluSp SINE Alu 1 296 -17 246 128 0 0 chr2 196887330 196887369 -53800485 + (TG)n Simple_repeat Simple_repeat 2 40 0 4259 102 10 0 chr2 196887380 196887997 -53799857 - L1PA13 LINE L1 -3 6160 5538 2048 218 31 6 chr2 196888202 196888799 -53799055 - MLT1B-int LTR MaLR -639 732 1 1211 235 46 49 chr2 196888799 196889190 -53798664 - MLT1B LTR MaLR 0 390 1 21 36 0 0 chr2 196889518 196889546 -53798308 + AT_rich Low_complexity Low_complexity 1 28 0 232 223 19 39 chr2 196889643 196889746 -53798108 + (TA)n Simple_repeat Simple_repeat 1 101 0 258 32 0 0 chr2 196889754 196889785 -53798069 + (CA)n Simple_repeat Simple_repeat 1 31 0 258 192 0 0 chr2 196889893 196889945 -53797909 - L1M3 LINE L1 -428 6563 6512 300 276 62 35 chr2 196890226 196890371 -53797483 - L1M3 LINE L1 -754 6203 6055 801 304 119 47 chr2 196890417 196891292 -53796562 - L1M3 LINE L1 -984 5973 5036 451 293 81 59 chr2 196891295 196891463 -53796391 - L1M3 LINE L1 -1946 5011 4848 29 0 0 0 chr2 196891463 196891492 -53796362 + AT_rich Low_complexity Low_complexity 1 29 0 451 293 81 59 chr2 196891492 196891764 -53796090 - L1M3 LINE L1 -2109 4848 4526 451 297 131 14 chr2 196891999 196892289 -53795565 - L1M3 LINE L1 -2685 4272 3949 322 271 127 18 chr2 196892292 196892458 -53795396 + LTR41 LTR ERVL 4 187 -586 408 285 94 34 chr2 196893024 196893291 -53794563 - L1M3 LINE L1 -3007 3950 3668 297 315 60 20 chr2 196893454 196893603 -53794251 - L2 LINE L2 -144 3169 3015 21 0 0 0 chr2 196893885 196893906 -53793948 + AT_rich Low_complexity Low_complexity 1 21 0 1516 209 0 10 chr2 196893962 196894254 -53793600 + AluJo SINE Alu 1 289 -23 1906 165 0 3 chr2 196894450 196894747 -53793107 + AluJb SINE Alu 3 298 -14 21 0 0 0 chr2 196895111 196895132 -53792722 + AT_rich Low_complexity Low_complexity 1 21 0 301 295 0 32 chr2 196896668 196896763 -53791091 - L1M3 LINE L1 -5422 1437 1346 304 338 30 51 chr2 196897265 196897502 -53790352 - L1MEc LINE L1 -6090 306 75 26 74 0 0 chr2 196897948 196898002 -53789852 + AT_rich Low_complexity Low_complexity 1 54 0 247 360 36 29 chr2 196898743 196898882 -53788972 + MIR SINE MIR 2 141 -121 417 212 35 0 chr2 196898991 196899076 -53788778 - MLT1D LTR MaLR -417 88 1 24 67 0 0 chr2 196899164 196899209 -53788645 + AT_rich Low_complexity Low_complexity 1 45 0 21 116 0 0 chr2 196899281 196899393 -53788461 + AT_rich Low_complexity Low_complexity 1 112 0 1480 113 0 9 chr2 196899437 196899666 -53788188 - L1PB1 LINE L1 -128 6023 5797 243 0 0 0 chr2 196900734 196900761 -53787093 + (TG)n Simple_repeat Simple_repeat 2 28 0 27 73 0 0 chr2 196900997 196901052 -53786802 + AT_rich Low_complexity Low_complexity 1 55 0 438 318 113 25 chr2 196901783 196902066 -53785788 - MLT1J2 LTR MaLR -140 310 3 23 97 0 0 chr2 196902409 196902481 -53785373 + AT_rich Low_complexity Low_complexity 1 72 0 388 163 35 12 chr2 196902484 196902570 -53785284 - MLT1E2 LTR MaLR 0 626 539 6612 55 1 5 chr2 196902889 196903728 -53784126 - L1PA7 LINE L1 0 6154 5319 795 203 100 148 chr2 196903730 196904218 -53783636 - MLT1C LTR MaLR 0 467 3 180 77 0 0 chr2 196905664 196905690 -53782164 + (CA)n Simple_repeat Simple_repeat 2 27 0 349 257 0 0 chr2 196906015 196906085 -53781769 - FRAM/FAM SINE Alu -99 67 1 656 68 0 0 chr2 196906085 196906173 -53781681 - L1PA7 LINE L1 -5 6149 6062 4852 68 3 0 chr2 196906173 196906800 -53781054 - L1PA7 LINE L1 -19 6135 5505 469 270 97 65 chr2 196906902 196907243 -53780611 + L1MB1 LINE L1 266 617 -6029 748 264 53 26 chr2 196907388 196907691 -53780163 + L1MB1 LINE L1 825 1135 -5407 653 256 55 11 chr2 196907671 196907945 -53779909 + L1MB1 LINE L1 4262 4547 -2097 * 388 180 20 0 chr2 196907920 196908020 -53779834 + L1MB1 LINE L1 5458 5559 -1085 * 748 278 21 24 chr2 196908049 196908340 -53779514 + L1PB2 LINE L1 5647 5936 -215 * 2444 183 41 10 chr2 196908086 196908578 -53779276 + L1MB1 LINE L1 5681 6187 -2 2396 192 54 8 chr2 196908593 196909411 -53778443 + L1M2 LINE L1 5105 5775 -516 2557 210 10 36 chr2 196909426 196910007 -53777847 + L1MB5 LINE L1 5597 6162 -12 2179 101 17 0 chr2 196910189 196910477 -53777377 + AluSp SINE Alu 1 293 -20 21 0 0 0 chr2 196910551 196910572 -53777282 + AT_rich Low_complexity Low_complexity 1 21 0 237 235 0 0 chr2 196912193 196912278 -53775576 + (TA)n Simple_repeat Simple_repeat 2 86 0 24 0 0 0 chr2 196912406 196912430 -53775424 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr2 196912985 196913008 -53774846 + (TA)n Simple_repeat Simple_repeat 1 23 0 1882 130 0 0 chr2 196913008 196913277 -53774577 - AluSx SINE Alu -5 307 39 1238 239 68 20 chr2 196913635 196913990 -53773864 + MLT1A2 LTR MaLR 1 372 -2 459 71 129 0 chr2 196914265 196914335 -53773519 - MADE1 DNA Mariner -1 79 1 207 100 0 0 chr2 196915908 196915938 -53771916 + (T)n Simple_repeat Simple_repeat 1 30 0 606 109 0 0 chr2 196916262 196916354 -53771500 + (GGAA)n Simple_repeat Simple_repeat 4 95 0 33 66 0 0 chr2 196917009 196917070 -53770784 + AT_rich Low_complexity Low_complexity 1 61 0 1677 172 9 26 chr2 196917079 196917428 -53770426 + L1PB4 LINE L1 5808 6150 -6 208 121 52 0 chr2 196917601 196917659 -53770195 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 2018 129 3 0 chr2 196917661 196917947 -53769907 - AluSg SINE Alu -23 287 1 200 91 23 45 chr2 196917982 196918026 -53769828 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 21 0 0 0 chr2 196918495 196918516 -53769338 + AT_rich Low_complexity Low_complexity 1 21 0 1346 171 4 19 chr2 196919487 196919744 -53768110 - L1PA15 LINE L1 -3 6162 5910 24 67 0 0 chr2 196920292 196920337 -53767517 + AT_rich Low_complexity Low_complexity 1 45 0 536 311 16 21 chr2 196921077 196921270 -53766584 + L2 LINE L2 3121 3312 -1 240 274 0 0 chr2 196921292 196921343 -53766511 + MIR SINE MIR 102 152 -110 466 139 13 0 chr2 196921399 196921478 -53766376 + MADE1 DNA Mariner 1 80 0 23 0 0 0 chr2 196922255 196922278 -53765576 + AT_rich Low_complexity Low_complexity 1 23 0 255 276 96 6 chr2 196922620 196922776 -53765078 + L1MC5 LINE L1 7274 7443 -518 235 188 29 16 chr2 196922776 196922849 -53765005 - LTR16C LTR ERVL 0 491 385 360 311 0 0 chr2 196922939 196923042 -53764812 - LTR16C LTR ERVL -191 300 198 425 276 22 8 chr2 196923325 196923459 -53764395 + L1MA10 LINE L1 6199 6334 0 253 245 51 71 chr2 196923465 196923661 -53764193 + L1MC5 LINE L1 7503 7694 -267 1609 182 0 34 chr2 196923711 196924007 -53763847 - AluJb SINE Alu -24 288 3 27 0 0 0 chr2 196924363 196924390 -53763464 + AT_rich Low_complexity Low_complexity 1 27 0 958 205 19 14 chr2 196924693 196924908 -53762946 - AluJo SINE Alu -43 269 54 25 65 0 0 chr2 196924919 196924965 -53762889 + AT_rich Low_complexity Low_complexity 1 46 0 231 100 0 0 chr2 196926139 196926179 -53761675 - AluSq SINE Alu 0 300 261 985 74 0 0 chr2 196926179 196926301 -53761553 - AluSq SINE Alu -88 225 104 1693 109 8 0 chr2 196926303 196926559 -53761295 - MSTB-int LTR MaLR -1393 258 1 503 151 0 54 chr2 196926559 196926652 -53761202 - MSTB LTR MaLR 0 426 339 2116 118 0 0 chr2 196926696 196926985 -53760869 + AluSg SINE Alu 11 299 -11 342 0 0 0 chr2 196927285 196927323 -53760531 + (TA)n Simple_repeat Simple_repeat 2 39 0 197 319 0 28 chr2 196927483 196927555 -53760299 - L2 LINE L2 0 3313 3244 219 339 184 0 chr2 196927890 196927999 -53759855 + MIR SINE MIR 57 185 -77 1855 216 81 0 chr2 196928305 196928699 -53759155 - MSTB LTR MaLR 0 426 1 8501 194 28 8 chr2 196928711 196930311 -53757543 - MSTB-int LTR MaLR -14 1637 6 2063 197 52 12 chr2 196930316 196930722 -53757132 - MSTB LTR MaLR 0 426 5 21 0 0 0 chr2 196931467 196931488 -53756366 + AT_rich Low_complexity Low_complexity 1 21 0 39 68 0 0 chr2 196931523 196931597 -53756257 + AT_rich Low_complexity Low_complexity 1 74 0 470 329 6 6 chr2 196931802 196931960 -53755894 - LTR33 LTR ERVL -8 513 356 205 174 55 64 chr2 196932151 196932173 -53755681 + (TAAA)n Simple_repeat Simple_repeat 1 22 -86 2043 96 0 0 chr2 196932173 196932443 -53755411 + AluY SINE Alu 39 308 -3 205 174 55 64 chr2 196932443 196932529 -53755325 + (TAAA)n Simple_repeat Simple_repeat 22 108 0 21 0 0 0 chr2 196933032 196933053 -53754801 + AT_rich Low_complexity Low_complexity 1 21 0 384 236 193 14 chr2 196933864 196934004 -53753850 + LTR41 LTR ERVL 1 165 -608 440 131 0 12 chr2 196935083 196935167 -53752687 + (TCC)n Simple_repeat Simple_repeat 3 85 0 189 107 0 0 chr2 196935517 196935545 -53752309 + (T)n Simple_repeat Simple_repeat 1 28 0 2075 132 3 0 chr2 196936178 196936482 -53751372 + AluSx SINE Alu 1 305 -7 297 0 0 0 chr2 196937502 196937535 -53750319 + (TTCC)n Simple_repeat Simple_repeat 1 33 0 300 304 88 0 chr2 196938007 196938132 -53749722 - L1ME3A LINE L1 -13 6157 6022 23 33 0 0 chr2 196938252 196938282 -53749572 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 196939085 196939114 -53748740 + AT_rich Low_complexity Low_complexity 1 29 0 1182 198 28 49 chr2 196939567 196939713 -53748141 - AluJo SINE Alu -25 287 139 183 80 0 0 chr2 196939713 196939738 -53748116 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2155 106 0 3 chr2 196939738 196940021 -53747833 - AluSx SINE Alu -29 283 2 1182 198 28 49 chr2 196940021 196940161 -53747693 - AluJo SINE Alu -171 141 6 26 0 0 0 chr2 196940701 196940727 -53747127 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr2 196940747 196940772 -53747082 + AT_rich Low_complexity Low_complexity 1 25 0 213 261 0 0 chr2 196941718 196941764 -53746090 + (TA)n Simple_repeat Simple_repeat 1 46 0 434 301 98 1 chr2 196941804 196942059 -53745795 + L1ME2 LINE L1 2312 2588 -3558 291 215 89 0 chr2 196942069 196942148 -53745706 + L1ME2 LINE L1 2626 2711 -3435 23 33 0 0 chr2 196942190 196942220 -53745634 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 196942295 196942321 -53745533 + AT_rich Low_complexity Low_complexity 1 26 0 1962 147 11 30 chr2 196942321 196942688 -53745166 - L1PB1 LINE L1 -8 6859 6500 312 172 0 0 chr2 196942689 196942747 -53745107 + (TA)n Simple_repeat Simple_repeat 2 59 0 14898 200 26 4 chr2 196942793 196946462 -53741392 - L1PB1 LINE L1 -365 6502 2692 189 0 0 0 chr2 196946462 196946483 -53741371 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 14898 200 26 4 chr2 196946483 196947649 -53740205 - L1PB1 LINE L1 -4175 2692 1554 2691 235 86 43 chr2 196947649 196948615 -53739239 - L1PB1 LINE L1 -5851 1012 6 2511 259 119 57 chr2 196948631 196950085 -53737769 + L1ME2 LINE L1 2750 4113 -2051 2212 116 3 0 chr2 196950085 196950395 -53737459 + AluSp SINE Alu 1 311 -2 2511 259 119 57 chr2 196950395 196951965 -53735889 + L1ME2 LINE L1 4113 5961 -203 6633 74 28 0 chr2 196952639 196953567 -53734287 - L1PA7 LINE L1 0 6154 5223 3453 100 0 10 chr2 196953572 196954081 -53733773 + L1P3 LINE L1 1224 1727 -4734 5318 88 3 17 chr2 196954206 196954972 -53732882 + L1P3 LINE L1 2271 3025 -3436 23 33 0 0 chr2 196955644 196955674 -53732180 + AT_rich Low_complexity Low_complexity 1 30 0 2046 97 21 0 chr2 196956502 196956807 -53731047 - AluSp SINE Alu 0 311 1 26 64 0 0 chr2 196957344 196957391 -53730463 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr2 196957973 196958001 -53729853 + AT_rich Low_complexity Low_complexity 1 28 0 22 99 0 0 chr2 196958664 196958735 -53729119 + AT_rich Low_complexity Low_complexity 1 71 0 985 276 109 28 chr2 196958823 196959290 -53728564 + MLT1D LTR MaLR 1 505 0 664 271 42 33 chr2 196959486 196959700 -53728154 - MER20 DNA MER1_type 0 219 4 1316 299 105 15 chr2 196959766 196960298 -53727556 + MLT1G1 LTR MaLR 9 588 -7 201 246 0 0 chr2 196960384 196960449 -53727405 + CT-rich Low_complexity Low_complexity 3 67 0 28 107 0 0 chr2 196961784 196961896 -53725958 + AT_rich Low_complexity Low_complexity 1 112 0 742 233 88 9 chr2 196964477 196964692 -53723162 + AluJo SINE Alu 1 232 -80 405 252 47 16 chr2 196964795 196964922 -53722932 + AluJb SINE Alu 167 297 -15 31 0 0 0 chr2 196964924 196964955 -53722899 + AT_rich Low_complexity Low_complexity 1 31 0 39 0 0 0 chr2 196965091 196965130 -53722724 + AT_rich Low_complexity Low_complexity 1 39 0 445 244 47 8 chr2 196965200 196965327 -53722527 + FLAM_C SINE Alu 1 132 -1 201 158 0 0 chr2 196966052 196966090 -53721764 + T-rich Low_complexity Low_complexity 1 38 0 462 243 27 0 chr2 196966773 196966884 -53720970 + MER70B LTR ERVL 454 567 -11 1489 269 61 44 chr2 196967003 196967349 -53720505 + L1MCb LINE L1 924 1263 -5301 1699 80 134 19 chr2 196967349 196967611 -53720243 + AluSg1 SINE Alu 1 292 -17 1489 269 61 44 chr2 196967611 196967669 -53720185 + L1MCb LINE L1 1263 1319 -5245 2051 101 0 31 chr2 196967669 196967957 -53719897 + AluSc SINE Alu 21 299 -10 1489 269 61 44 chr2 196967957 196968454 -53719400 + L1MCb LINE L1 1319 1933 -4631 246 280 70 86 chr2 196968457 196968714 -53719140 - LTR36 LTR ERV1 0 611 359 386 246 8 41 chr2 196968936 196969058 -53718796 - LTR38B LTR ERV1 -492 118 1 946 267 94 48 chr2 196969061 196969709 -53718145 + L1MCb LINE L1 2037 2714 -4031 568 229 78 10 chr2 196969747 196969939 -53717915 + L1MC3 LINE L1 6020 6224 -1561 23 0 0 0 chr2 196970211 196970234 -53717620 + AT_rich Low_complexity Low_complexity 1 23 0 396 222 111 0 chr2 196970729 196970846 -53717008 + L2 LINE L2 1317 1446 -1868 582 304 118 17 chr2 196971582 196971819 -53716035 - MIR SINE MIR 0 262 2 24 32 0 0 chr2 196972379 196972410 -53715444 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 196972653 196972682 -53715172 + AT_rich Low_complexity Low_complexity 1 29 0 35 54 0 0 chr2 196973790 196973846 -53714008 + AT_rich Low_complexity Low_complexity 1 56 0 24 32 0 0 chr2 196973900 196973931 -53713923 + AT_rich Low_complexity Low_complexity 1 31 0 224 182 0 30 chr2 196973937 196974003 -53713851 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 25 0 0 0 chr2 196974126 196974151 -53713703 + AT_rich Low_complexity Low_complexity 1 25 0 1504 183 56 20 chr2 196974192 196974547 -53713307 - THE1C LTR MaLR 0 375 8 2275 87 0 23 chr2 196974635 196974934 -53712920 + AluSg SINE Alu 1 292 -18 25 31 0 0 chr2 196974934 196974966 -53712888 + AT_rich Low_complexity Low_complexity 1 32 0 432 0 0 0 chr2 196975060 196975108 -53712746 + (TA)n Simple_repeat Simple_repeat 1 48 0 391 374 11 0 chr2 196975701 196975875 -53711979 - MER5B DNA MER1_type -1 177 2 3295 208 57 25 chr2 196976019 196976796 -53711058 - L1MB7 LINE L1 0 6184 5433 183 42 0 0 chr2 196976796 196976820 -53711034 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1482 108 0 10 chr2 196976820 196977024 -53710830 - AluSc SINE Alu -31 278 77 3295 208 57 25 chr2 196977024 196977334 -53710520 - L1MB7 LINE L1 -750 5434 5069 207 114 0 0 chr2 196977337 196977372 -53710482 + (CA)n Simple_repeat Simple_repeat 2 36 0 1868 145 49 19 chr2 196977379 196977704 -53710150 - MER2 DNA MER2_type -9 336 2 351 183 53 8 chr2 196977705 196977794 -53710060 - L1P5 LINE L1 -362 5789 5701 * 1507 209 85 66 chr2 196977788 196978149 -53709705 + L1MD3 LINE L1 7446 7822 -173 2015 170 75 8 chr2 196978149 196978550 -53709304 + MSTA LTR MaLR 1 428 0 1507 209 85 66 chr2 196978550 196978715 -53709139 + L1MD3 LINE L1 7822 7982 -13 235 70 23 23 chr2 196978950 196978993 -53708861 + (TA)n Simple_repeat Simple_repeat 2 44 0 924 163 131 151 chr2 196979362 196979618 -53708236 - MLT1B LTR MaLR 0 390 143 2062 104 0 14 chr2 196979618 196979915 -53707939 - AluY SINE Alu -18 293 1 924 163 131 151 chr2 196979915 196980056 -53707798 - MLT1B LTR MaLR -247 143 1 1146 250 117 44 chr2 196980723 196981286 -53706568 - L1ME3A LINE L1 -6 6164 5561 230 280 0 0 chr2 196981331 196981381 -53706473 + MLT1G1 LTR MaLR 228 277 -318 525 252 90 7 chr2 196981464 196981619 -53706235 + MLT1G1 LTR MaLR 426 593 -2 1266 129 5 0 chr2 196982177 196982405 -53705449 - AluSp SINE Alu 0 318 90 770 300 14 21 chr2 196982405 196982688 -53705166 - L1ME1 LINE L1 -10 6225 5945 1185 234 139 76 chr2 196982737 196984034 -53703820 - L1ME1 LINE L1 -524 5711 4357 448 333 114 27 chr2 196984359 196984807 -53703047 - L1ME1 LINE L1 -5799 597 111 220 290 24 8 chr2 196985044 196985168 -53702686 + (TA)n Simple_repeat Simple_repeat 2 127 0 29 60 0 0 chr2 196985191 196985241 -53702613 + AT_rich Low_complexity Low_complexity 1 50 0 318 248 15 7 chr2 196986540 196986677 -53701177 + (TA)n Simple_repeat Simple_repeat 1 138 0 2088 106 3 0 chr2 196987229 196987511 -53700343 - AluSg SINE Alu -27 283 1 1173 137 0 0 chr2 196988789 196988964 -53698890 - AluSq SINE Alu -8 305 131 23 68 0 0 chr2 196989043 196989087 -53698767 + AT_rich Low_complexity Low_complexity 1 44 0 333 0 0 0 chr2 196989327 196989364 -53698490 + (TG)n Simple_repeat Simple_repeat 2 38 0 26 0 0 0 chr2 196989512 196989538 -53698316 + AT_rich Low_complexity Low_complexity 1 26 0 268 337 20 10 chr2 196990452 196990553 -53697301 + MIR3 SINE MIR 92 193 -15 258 32 0 0 chr2 196990756 196990787 -53697067 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 351 0 0 0 chr2 196990786 196990825 -53697029 + (TG)n Simple_repeat Simple_repeat 2 40 0 43 35 0 0 chr2 196991533 196991590 -53696264 + AT_rich Low_complexity Low_complexity 1 57 0 324 331 23 23 chr2 196991623 196991756 -53696098 - MER5A DNA MER1_type -1 188 56 23 33 0 0 chr2 196991992 196992022 -53695832 + AT_rich Low_complexity Low_complexity 1 30 0 31 58 0 0 chr2 196992523 196992575 -53695279 + AT_rich Low_complexity Low_complexity 1 52 0 2082 163 25 89 chr2 196993000 196993527 -53694327 - L1MA10 LINE L1 -3 6331 5839 25 31 0 0 chr2 196994089 196994121 -53693733 + AT_rich Low_complexity Low_complexity 1 32 0 217 214 18 36 chr2 196994774 196994830 -53693024 + L2 LINE L2 3193 3247 -25 750 145 8 0 chr2 196994980 196995111 -53692743 - MER41A LTR ERV1 -1 553 422 2361 73 3 10 chr2 196995112 196995447 -53692407 + AluY SINE Alu 1 333 0 21 57 0 0 chr2 196995830 196995865 -53691989 + GC_rich Low_complexity Low_complexity 1 35 0 29 70 0 0 chr2 196995929 196995986 -53691868 + GC_rich Low_complexity Low_complexity 1 57 0 234 0 0 0 chr2 196996076 196996102 -53691752 + (A)n Simple_repeat Simple_repeat 1 26 0 2908 94 75 0 chr2 196996102 196996518 -53691336 - MER41A LTR ERV1 -107 447 1 186 71 0 0 chr2 196997147 196997175 -53690679 + (CAATT)n Simple_repeat Simple_repeat 4 31 0 225 211 0 0 chr2 196997296 196997348 -53690506 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 2111 125 0 0 chr2 196997561 196997856 -53689998 + AluSg SINE Alu 1 295 -15 23 54 0 0 chr2 196997984 196998021 -53689833 + AT_rich Low_complexity Low_complexity 1 37 0 316 254 85 8 chr2 196998570 196998688 -53689166 + L1MCc LINE L1 11 137 -6286 407 320 100 10 chr2 196998760 196998960 -53688894 + L1MCc LINE L1 235 452 -5971 593 343 68 28 chr2 196999309 196999840 -53688014 + L1MCc LINE L1 981 1532 -4891 600 283 99 83 chr2 196999896 197000615 -53687239 + L1MCc LINE L1 1802 2549 -4573 218 79 0 26 chr2 197000615 197000653 -53687201 + (CA)n Simple_repeat Simple_repeat 2 38 0 600 283 99 83 chr2 197000653 197001138 -53686716 + L1MCc LINE L1 2549 3025 -4097 237 33 0 0 chr2 197001178 197001208 -53686646 + (CA)n Simple_repeat Simple_repeat 2 31 0 1950 129 24 0 chr2 197001234 197001521 -53686333 + AluSg SINE Alu 1 294 -16 768 177 5 59 chr2 197001528 197001714 -53686140 - FRAM SINE Alu 0 176 1 463 279 41 0 chr2 197001714 197001911 -53685943 + L1MCc LINE L1 3056 3260 -3681 287 324 0 0 chr2 197002004 197002109 -53685745 + L1MCc LINE L1 3456 3560 -3381 31 26 0 0 chr2 197002775 197002813 -53685041 + AT_rich Low_complexity Low_complexity 1 38 0 222 319 75 11 chr2 197054392 197054486 -53633368 + L2 LINE L2 3162 3261 -11 21 36 0 0 chr2 197055173 197055201 -53632653 + AT_rich Low_complexity Low_complexity 1 28 0 555 40 66 0 chr2 197055788 197055864 -53631990 - MER4-int LTR ERV1 -811 5787 5707 295 133 0 0 chr2 197055864 197055909 -53631945 + MER4A LTR ERV1 620 664 0 4230 107 19 17 chr2 197056002 197056647 -53631207 - MER4A LTR ERV1 -14 650 5 838 242 16 0 chr2 197056795 197056981 -53630873 - MER5A DNA MER1_type 0 189 1 231 337 35 0 chr2 197057124 197057210 -53630644 + MIR3 SINE MIR 115 203 -5 4599 194 105 5 chr2 197057807 197058856 -53628998 + L1PB1 LINE L1 6 1159 -5704 320 125 28 0 chr2 197059004 197059076 -53628778 + CT-rich Low_complexity Low_complexity 1 74 0 366 90 149 0 chr2 197060788 197060855 -53626999 - MADE1 DNA Mariner -3 77 1 24 53 0 0 chr2 197061370 197061408 -53626446 + AT_rich Low_complexity Low_complexity 1 38 0 1643 142 65 0 chr2 197061408 197061718 -53626136 - L1MA6 LINE L1 -8 6292 5963 380 248 85 16 chr2 197063195 197063324 -53624530 + MIR SINE MIR 119 256 -6 2162 90 24 0 chr2 197064130 197064419 -53623435 - AluSq SINE Alu -17 296 1 23 33 0 0 chr2 197064831 197064861 -53622993 + AT_rich Low_complexity Low_complexity 1 30 0 1989 96 33 0 chr2 197065007 197065308 -53622546 + AluY SINE Alu 1 310 0 258 106 0 0 chr2 197065559 197065606 -53622248 + (T)n Simple_repeat Simple_repeat 1 47 0 38 51 0 0 chr2 197065801 197065860 -53621994 + AT_rich Low_complexity Low_complexity 1 59 0 224 373 82 0 chr2 197066245 197066355 -53621499 - L2 LINE L2 -2 3311 3193 11456 205 22 22 chr2 197067334 197071265 -53616589 + L1PB1 LINE L1 1431 5439 -1423 305 233 0 0 chr2 197071256 197071316 -53616538 - L1P LINE L1 -1370 4776 4717 * 468 0 0 0 chr2 197071927 197071979 -53615875 + (GAAA)n Simple_repeat Simple_repeat 1 52 0 185 314 0 0 chr2 197072372 197072423 -53615431 + L2 LINE L2 3210 3260 -12 1494 61 0 0 chr2 197072440 197072621 -53615233 - AluY SINE Alu -21 290 110 699 227 135 4 chr2 197073131 197073360 -53614494 + AluSg SINE Alu 40 298 -12 1007 281 116 53 chr2 197073384 197073969 -53613885 - L2 LINE L2 -21 3292 2662 2352 88 3 0 chr2 197073969 197074276 -53613578 + AluSx SINE Alu 1 308 -4 1007 281 116 53 chr2 197074276 197074412 -53613442 - L2 LINE L2 -651 2662 2536 5610 126 35 8 chr2 197076703 197077800 -53610054 + L1PB1 LINE L1 5741 6867 0 1834 143 17 10 chr2 197079401 197079702 -53608152 + AluSq SINE Alu 1 303 -10 525 91 61 0 chr2 197079721 197079820 -53608034 + GA-rich Low_complexity Low_complexity 4 108 0 3941 263 45 52 chr2 197080240 197081834 -53606020 + L1M4 LINE L1 16 1598 -4944 1874 175 34 0 chr2 197081893 197082248 -53605606 + L1PB4 LINE L1 5789 6155 -1 2126 241 68 12 chr2 197082249 197083055 -53604799 + L1MB7 LINE L1 5314 6184 0 1296 181 75 15 chr2 197083061 197083326 -53604528 + AluJo SINE Alu 1 281 -31 293 199 48 20 chr2 197083495 197083641 -53604213 + (TA)n Simple_repeat Simple_repeat 1 150 0 1953 155 10 0 chr2 197084220 197084529 -53603325 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 197085449 197085470 -53602384 + AT_rich Low_complexity Low_complexity 1 21 0 299 256 136 16 chr2 197085517 197085642 -53602212 + MLT1J2 LTR MaLR 279 418 -32 5370 133 24 9 chr2 197086472 197087667 -53600187 + L1PA16 LINE L1 4943 6157 -9 23 54 0 0 chr2 197089130 197089167 -53598687 + AT_rich Low_complexity Low_complexity 1 37 0 180 97 0 0 chr2 197089602 197089633 -53598221 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 887 173 0 0 chr2 197089993 197090143 -53597711 + L1PA8A LINE L1 5972 6121 -10 22 0 0 0 chr2 197090877 197090899 -53596955 + AT_rich Low_complexity Low_complexity 1 22 0 35 24 0 0 chr2 197091110 197091152 -53596702 + AT_rich Low_complexity Low_complexity 1 42 0 12758 113 16 4 chr2 197093285 197096019 -53591835 + L1PA8A LINE L1 3364 6131 0 366 128 41 47 chr2 197096091 197096263 -53591591 + (TA)n Simple_repeat Simple_repeat 2 172 0 2043 253 30 13 chr2 197096475 197096941 -53590913 - MER70B LTR ERVL -102 476 3 195 129 0 0 chr2 197097075 197097106 -53590748 + (G)n Simple_repeat Simple_repeat 1 31 0 42 65 0 0 chr2 197097112 197097189 -53590665 + AT_rich Low_complexity Low_complexity 1 77 0 22 35 0 0 chr2 197099249 197099278 -53588576 + AT_rich Low_complexity Low_complexity 1 29 0 1426 253 19 11 chr2 197099725 197100096 -53587758 - MLT1A2 LTR MaLR 0 374 1 511 220 97 42 chr2 197100706 197100965 -53586889 - MER33 DNA MER1_type -8 316 44 1506 113 9 0 chr2 197100997 197101226 -53586628 + L1MA1 LINE L1 6072 6302 0 244 188 0 21 chr2 197101257 197101305 -53586549 + MER3 DNA MER1_type 155 201 -8 186 43 0 0 chr2 197102301 197102324 -53585530 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1192 228 64 40 chr2 197102881 197103258 -53584596 + MLT1B LTR MaLR 1 386 -4 8516 128 25 15 chr2 197103896 197105292 -53582562 - L1PA8A LINE L1 -762 5384 3975 3641 82 0 2 chr2 197105281 197105766 -53582088 + L1PA8A LINE L1 5393 5876 -255 * 3668 191 16 14 chr2 197105893 197106718 -53581136 - L1MA9 LINE L1 -284 6028 5200 5811 76 62 0 chr2 197106718 197107496 -53580358 - LTR12 LTR ERV1 0 826 1 3668 191 16 14 chr2 197107496 197107761 -53580093 - L1MA9 LINE L1 -1112 5200 4937 4996 252 70 28 chr2 197109025 197109342 -53578512 + L1M2b LINE L1 1643 1945 -5263 2048 144 48 22 chr2 197109342 197109697 -53578157 - THE1B LTR MaLR 0 364 1 4996 252 70 28 chr2 197109697 197109997 -53577857 + L1M2b LINE L1 1945 2231 -4977 1984 153 0 0 chr2 197109997 197110298 -53577556 + AluSg SINE Alu 3 303 -7 4996 252 70 28 chr2 197110298 197112916 -53574938 + L1M2b LINE L1 2231 5123 -2085 1814 258 65 34 chr2 197112929 197113502 -53574352 - L1ME1 LINE L1 -158 6077 5459 2100 122 0 7 chr2 197113502 197113798 -53574056 - AluSc SINE Alu -15 294 1 1814 258 65 34 chr2 197113798 197114065 -53573789 - L1ME1 LINE L1 -776 5459 5202 711 273 103 51 chr2 197114081 197114267 -53573587 - L1ME1 LINE L1 -4901 1495 1320 2334 95 3 3 chr2 197114267 197114573 -53573281 - AluSg SINE Alu -4 306 1 711 273 103 51 chr2 197114573 197115136 -53572718 - L1ME1 LINE L1 -5076 1320 707 287 344 75 18 chr2 197115178 197115405 -53572449 - L1ME1 LINE L1 -5797 599 360 227 161 36 0 chr2 197115433 197115489 -53572365 - L1MC4 LINE L1 -1338 6704 6647 193 339 18 67 chr2 197116016 197116181 -53571673 + L2 LINE L2 3156 3312 -1 2725 7 0 0 chr2 197116323 197116620 -53571234 - AluYa5 SINE Alu -1 310 14 189 319 59 50 chr2 197117543 197117662 -53570192 + L2 LINE L2 2736 2855 -459 2508 38 3 22 chr2 197118628 197118945 -53568909 + AluY SINE Alu 1 311 0 1078 124 22 45 chr2 197121094 197121272 -53566582 + AluJb SINE Alu 1 174 -138 968 158 67 0 chr2 197121285 197121450 -53566404 + AluSg/x SINE Alu 119 294 -16 209 119 24 0 chr2 197121453 197121495 -53566359 + (TA)n Simple_repeat Simple_repeat 2 44 0 1366 117 28 0 chr2 197122571 197122785 -53565069 - AluSx SINE Alu -92 220 1 257 173 0 0 chr2 197123192 197123244 -53564610 - MLT-int LTR MaLR -254 1481 1430 2247 161 5 29 chr2 197123257 197123668 -53564186 + L1PA16 LINE L1 5750 6150 -16 257 185 37 0 chr2 197123782 197123836 -53564018 - MER4-int LTR ERV1 -5434 1164 1109 1501 210 121 21 chr2 197124513 197124936 -53562918 + MLT1C LTR MaLR 1 465 -2 25 0 0 0 chr2 197125162 197125187 -53562667 + AT_rich Low_complexity Low_complexity 1 25 0 229 389 102 52 chr2 197125251 197125655 -53562199 + L2 LINE L2 2848 3271 -1 28 29 0 0 chr2 197125817 197125852 -53562002 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 197125881 197125910 -53561944 + AT_rich Low_complexity Low_complexity 1 29 0 2039 91 0 44 chr2 197127142 197127440 -53560414 - AluSc SINE Alu -24 285 1 901 205 38 71 chr2 197129481 197129720 -53558134 + MLT1D LTR MaLR 273 503 -2 261 235 123 0 chr2 197130828 197130909 -53556945 - MER63 DNA MER1_type 0 1061 971 * 301 250 0 0 chr2 197130896 197130956 -53556898 - MER63 DNA MER1_type -94 742 683 496 259 25 70 chr2 197131012 197131255 -53556599 + L1ME1 LINE L1 5745 5976 -190 433 244 25 38 chr2 197131357 197131517 -53556337 + L1MA10 LINE L1 6177 6334 0 701 236 48 14 chr2 197131538 197131836 -53556018 + L1ME1 LINE L1 5175 5480 -686 929 206 62 93 chr2 197131840 197132161 -53555693 - MLT1B LTR MaLR 0 390 80 451 189 21 21 chr2 197132232 197132327 -53555527 - MLT1B LTR MaLR -295 95 1 1131 233 83 93 chr2 197132327 197132931 -53554923 + L1ME1 LINE L1 5480 6077 -89 888 335 51 38 chr2 197133020 197133552 -53554302 - L2 LINE L2 -688 2626 2088 248 339 41 8 chr2 197134338 197134459 -53553395 - L3 LINE CR1 -278 1299 1175 454 318 55 65 chr2 197135136 197135333 -53552521 - L1ME LINE L1 -479 5683 5486 2098 175 13 53 chr2 197135333 197135785 -53552069 - Tigger2a DNA MER2_type 0 434 1 454 318 55 65 chr2 197135785 197135954 -53551900 - L1ME LINE L1 -676 5486 5319 814 106 113 0 chr2 197135954 197136096 -53551758 + L1MA3 LINE L1 6148 6305 0 454 318 55 65 chr2 197136096 197136128 -53551726 - L1ME LINE L1 -843 5319 5288 5512 157 53 16 chr2 197136176 197137539 -53550315 - L1PB4 LINE L1 -3 6153 4715 3676 86 0 25 chr2 197137539 197138063 -53549791 - MER9 LTR ERVK 0 511 1 5512 157 53 16 chr2 197138063 197138249 -53549605 - L1PB4 LINE L1 -1441 4715 4537 33 43 0 0 chr2 197138313 197138360 -53549494 + AT_rich Low_complexity Low_complexity 1 47 0 252 137 0 41 chr2 197138617 197138690 -53549164 + (TA)n Simple_repeat Simple_repeat 2 71 0 200 163 0 20 chr2 197138908 197138957 -53548897 + GA-rich Low_complexity Low_complexity 2 49 0 416 331 69 0 chr2 197139184 197139359 -53548495 + MIR SINE MIR 65 251 -11 3905 226 45 47 chr2 197140176 197140264 -53547590 + L1MC3 LINE L1 5606 5693 -2092 1518 176 17 30 chr2 197140264 197140560 -53547294 + AluJo SINE Alu 1 292 -20 3905 226 45 47 chr2 197140560 197141510 -53546344 + L1MC3 LINE L1 5693 6644 -1141 204 40 0 0 chr2 197141510 197141535 -53546319 + (TAGA)n Simple_repeat Simple_repeat 1 25 0 3905 226 45 47 chr2 197141535 197141754 -53546100 + L1MC3 LINE L1 6644 6862 -923 1309 234 94 0 chr2 197141761 197142090 -53545764 + L1MC3 LINE L1 7094 7453 -332 1783 159 0 29 chr2 197142291 197142599 -53545255 - AluJb SINE Alu -13 299 1 510 228 0 0 chr2 197144220 197144347 -53543507 + (TA)n Simple_repeat Simple_repeat 2 128 0 236 156 0 0 chr2 197144347 197144392 -53543462 + LTR66 LTR ERVL 394 438 -172 316 248 79 30 chr2 197144448 197144549 -53543305 + L1MC4 LINE L1 6603 6708 -1334 197 107 67 27 chr2 197145807 197145882 -53541972 + (TA)n Simple_repeat Simple_repeat 1 78 0 284 321 81 61 chr2 197146100 197146346 -53541508 + MIR SINE MIR 2 252 -10 289 350 66 0 chr2 197146561 197146698 -53541156 - L2 LINE L2 0 3313 3168 921 203 38 13 chr2 197148689 197148926 -53538928 - L1MD3 LINE L1 0 7995 7753 1913 214 66 48 chr2 197148953 197149499 -53538355 - MER74A LTR ERVL -2 556 1 186 43 0 0 chr2 197149787 197149810 -53538044 + (CA)n Simple_repeat Simple_repeat 1 23 0 218 328 16 0 chr2 197149831 197149895 -53537959 + L2 LINE L2 2988 3052 -220 1149 278 20 60 chr2 197149973 197150523 -53537331 + L1ME3A LINE L1 5424 5951 -219 216 0 0 0 chr2 197150831 197150855 -53536999 + (TG)n Simple_repeat Simple_repeat 2 25 0 535 188 68 8 chr2 197151026 197151159 -53536695 - LTR16C LTR ERVL 0 491 351 2006 106 0 4 chr2 197151166 197151439 -53536415 + AluSq SINE Alu 37 308 -5 331 342 26 64 chr2 197151517 197151783 -53536071 - LTR16C LTR ERVL -160 331 76 676 274 77 25 chr2 197151913 197152386 -53535468 - L1MC5 LINE L1 -519 7490 7120 1222 170 54 33 chr2 197154007 197154306 -53533548 + MLT1C LTR MaLR 1 345 -122 2690 141 143 2 chr2 197154311 197154795 -53533059 - LTR64 LTR ERVK -4 554 3 601 228 8 0 chr2 197154795 197154921 -53532933 + MLT1C LTR MaLR 341 467 0 5497 126 27 3 chr2 197155812 197156687 -53531167 - L1PA14 LINE L1 -3 6158 5263 8092 216 14 23 chr2 197157104 197159126 -53528728 - L1PA14 LINE L1 -910 5236 3233 271 287 53 21 chr2 197159647 197159741 -53528113 + MER58 DNA MER1_type 1 97 -289 * 277 239 109 0 chr2 197159739 197159831 -53528023 + MER58 DNA MER1_type 2319 2420 0 21 57 0 0 chr2 197160284 197160319 -53527535 + AT_rich Low_complexity Low_complexity 1 35 0 1223 237 46 54 chr2 197160937 197161329 -53526525 - MLT1B LTR MaLR -1 389 1 1324 229 16 32 chr2 197161501 197161872 -53525982 - MLT1A1 LTR MaLR 0 365 1 7273 207 48 68 chr2 197166035 197167542 -53520312 + L1MA10 LINE L1 2978 4422 -1724 2452 72 13 0 chr2 197167542 197167848 -53520006 + AluSp SINE Alu 1 310 -3 7273 207 48 68 chr2 197167848 197168664 -53519190 + L1MA10 LINE L1 4422 5253 -893 2999 180 46 14 chr2 197168716 197168886 -53518968 + L1MA10 LINE L1 5657 5820 -514 2008 122 13 3 chr2 197168886 197169190 -53518664 + AluSx SINE Alu 1 307 -5 2999 180 46 14 chr2 197169190 197169676 -53518178 + L1MA10 LINE L1 5820 6334 0 21 57 0 0 chr2 197170116 197170151 -53517703 + AT_rich Low_complexity Low_complexity 1 35 0 961 216 70 45 chr2 197171027 197171314 -53516540 + L1MC3 LINE L1 7492 7785 0 3486 101 8 2 chr2 197173303 197173796 -53514058 + Harlequin LTR ERV1 4485 4980 -3419 2369 176 129 62 chr2 197173763 197174607 -53513247 + Harlequin LTR ERV1 840 1740 -5156 * 5366 105 5 15 chr2 197174605 197175387 -53512467 + Harlequin LTR ERV1 7626 8399 0 2058 74 221 203 chr2 197175387 197175958 -53511896 + LTR12 LTR ERV1 1 581 -133 281 236 0 14 chr2 197177065 197177137 -53510717 + MLT1J1 LTR MaLR 354 424 -22 219 186 0 0 chr2 197177627 197177670 -53510184 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1444 277 65 44 chr2 197178203 197178774 -53509080 - MER92B LTR ERV1 0 636 54 1676 261 74 9 chr2 197178790 197179119 -53508735 - L1MA9 LINE L1 -38 6274 5897 441 0 0 0 chr2 197179119 197179168 -53508686 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 1676 261 74 9 chr2 197179168 197179366 -53508488 - L1MA9 LINE L1 -415 5897 5713 359 158 0 0 chr2 197179366 197179423 -53508431 - MER92B LTR ERV1 -579 57 1 24 53 0 0 chr2 197179583 197179621 -53508233 + AT_rich Low_complexity Low_complexity 1 38 0 345 309 75 5 chr2 197180348 197180536 -53507318 + L1MEc LINE L1 38 238 -6158 394 328 40 27 chr2 197180922 197181297 -53506557 + L1MEc LINE L1 649 1028 -5368 1052 274 159 2 chr2 197181298 197181725 -53506129 + MLT1D LTR MaLR 2 495 -10 2685 212 32 31 chr2 197181738 197182396 -53505458 + MLT1D-int LTR MaLR 88 863 -508 1279 241 35 78 chr2 197182660 197183083 -53504771 + MLT1D-int LTR MaLR 961 1365 -6 768 247 170 91 chr2 197183176 197183523 -53504331 + MLT1C LTR MaLR 62 407 -60 1841 141 3 20 chr2 197183523 197183849 -53504005 - AluSq SINE Alu 0 313 1 768 247 170 91 chr2 197183849 197183912 -53503942 + MLT1C LTR MaLR 407 464 -3 983 275 84 32 chr2 197183912 197184363 -53503491 + L1MEc LINE L1 1030 1533 -4863 3844 183 7 20 chr2 197184363 197185107 -53502747 - MER50 LTR ERV1 0 734 1 983 275 84 32 chr2 197185107 197185371 -53502483 + L1MEc LINE L1 1533 1782 -4614 21 36 0 0 chr2 197185834 197185862 -53501992 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 197186208 197186231 -53501623 + AT_rich Low_complexity Low_complexity 1 23 0 398 201 26 34 chr2 197186530 197186684 -53501170 + MER3 DNA MER1_type 2 124 -85 439 291 148 10 chr2 197186728 197186924 -53500930 - MER58A DNA MER1_type 0 224 2 1690 278 80 30 chr2 197187052 197187524 -53500330 + L1M4 LINE L1 3692 4139 -2007 2263 99 0 10 chr2 197187524 197187828 -53500026 + AluY SINE Alu 1 301 -10 1690 278 80 30 chr2 197187828 197188335 -53499519 + L1M4 LINE L1 4139 4720 -1426 767 203 44 12 chr2 197188737 197188944 -53498910 + MER61D LTR ERV1 338 483 -18 3998 212 34 19 chr2 197188983 197189917 -53497937 + MER61D-int LTR ERV1 34 981 -6015 597 271 25 32 chr2 197190140 197190432 -53497422 + MER61D-int LTR ERV1 1171 1668 -5328 238 304 0 0 chr2 197190449 197190528 -53497326 + L1MC4 LINE L1 6614 6692 -1350 227 152 0 0 chr2 197190531 197190577 -53497277 + LTR66 LTR ERVL 394 439 -171 227 152 0 0 chr2 197190539 197190585 -53497269 - LTR66 LTR ERVL -171 439 394 249 139 0 0 chr2 197190590 197190633 -53497221 + (TG)n Simple_repeat Simple_repeat 2 44 0 524 191 35 24 chr2 197190635 197190779 -53497075 + MER52-int LTR ERV1 1397 1520 -5571 5818 230 48 11 chr2 197190811 197191072 -53496782 + MER52-int LTR ERV1 2168 2418 -4673 3632 103 4 6 chr2 197191072 197191584 -53496270 + MER9 LTR ERVK 1 511 0 5818 230 48 11 chr2 197191584 197192530 -53495324 + MER52-int LTR ERV1 2418 3420 -3671 590 179 8 0 chr2 197192896 197193019 -53494835 - pTR5 LTR ERV1 -1573 865 742 * 3352 99 20 9 chr2 197193018 197193707 -53494147 - MER61-int LTR ERV1 -118 5099 4358 287 87 43 0 chr2 197193707 197193753 -53494101 + Tigger1 DNA MER2_type 872 919 -1499 3899 103 4 14 chr2 197193753 197194308 -53493546 - MER61-int LTR ERV1 -852 4365 3817 356 207 0 0 chr2 197194308 197194366 -53493488 + Tigger1 DNA MER2_type 2360 2417 -1 232 219 24 24 chr2 197194372 197194454 -53493400 + (CATATA)n Simple_repeat Simple_repeat 2 83 0 298 300 0 0 chr2 197195463 197195543 -53492311 + (TG)n Simple_repeat Simple_repeat 1 80 0 1574 198 128 69 chr2 197195831 197196572 -53491282 - LTR1 LTR ERV1 0 785 1 21 36 0 0 chr2 197196912 197196940 -53490914 + AT_rich Low_complexity Low_complexity 1 28 0 264 303 146 28 chr2 197197129 197197353 -53490501 - MIR SINE MIR -1 261 12 337 261 11 0 chr2 197197354 197197446 -53490408 - MIR3 SINE MIR -21 187 95 3499 131 4 8 chr2 197198447 197198974 -53488880 + MER1A DNA MER1_type 3 527 0 233 174 14 43 chr2 197199056 197199125 -53488729 + (TATAA)n Simple_repeat Simple_repeat 2 68 0 667 307 134 32 chr2 197199127 197199537 -53488317 - MLT1H LTR MaLR -24 525 74 447 19 0 0 chr2 197199574 197199626 -53488228 + (CATATA)n Simple_repeat Simple_repeat 1 52 0 198 327 103 9 chr2 197199824 197199931 -53487923 - L2 LINE L2 -8 3305 3189 32 57 0 0 chr2 197200319 197200372 -53487482 + AT_rich Low_complexity Low_complexity 1 53 0 290 274 0 0 chr2 197202223 197202296 -53485558 + (CATA)n Simple_repeat Simple_repeat 3 75 0 1942 106 0 41 chr2 197202397 197202714 -53485140 - AluSg SINE Alu 0 305 1 234 176 0 0 chr2 197203181 197203232 -53484622 + (CA)n Simple_repeat Simple_repeat 2 52 0 2071 138 3 10 chr2 197203682 197203993 -53483861 + AluSx SINE Alu 2 310 -2 207 69 0 0 chr2 197204017 197204046 -53483808 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2702 7 0 0 chr2 197204123 197204420 -53483434 + AluYa5 SINE Alu 1 297 -14 2130 176 47 7 chr2 197205032 197205435 -53482419 - MSTB LTR MaLR -7 419 1 657 279 30 0 chr2 197205576 197205741 -53482113 + MER5B DNA MER1_type 3 172 -6 307 357 16 33 chr2 197206032 197206214 -53481640 - MER5A DNA MER1_type -7 182 4 642 62 0 0 chr2 197206283 197206364 -53481490 - L1PA5 LINE L1 -209 5945 5865 1686 46 0 5 chr2 197206364 197206573 -53481281 + L1PA5 LINE L1 5936 6151 -3 1833 142 84 32 chr2 197207381 197207727 -53480127 - THE1B LTR MaLR 0 364 1 2067 173 31 14 chr2 197207889 197208243 -53479611 + LTR23 LTR ERV1 1 365 -72 2894 205 27 59 chr2 197208243 197208989 -53478865 + MER72 LTR ERV1 1 722 0 2067 173 31 14 chr2 197208989 197209055 -53478799 + LTR23 LTR ERV1 365 428 -9 2261 112 3 0 chr2 197209055 197209393 -53478461 - AluSp SINE Alu 0 339 1 236 224 20 0 chr2 197209531 197209580 -53478274 - 5S rRNA rRNA -71 50 1 1206 188 227 24 chr2 197210811 197211225 -53476629 - LTR54B LTR ERV1 0 498 1 1887 220 43 59 chr2 197211368 197212014 -53475840 + MER92B LTR ERV1 1 636 0 279 54 0 0 chr2 197212175 197212212 -53475642 + (TG)n Simple_repeat Simple_repeat 1 37 0 1808 113 40 22 chr2 197212674 197212949 -53474905 + AluSg SINE Alu 11 290 -20 204 47 47 23 chr2 197212949 197212992 -53474862 + (TA)n Simple_repeat Simple_repeat 2 45 0 396 141 41 12 chr2 197213542 197213712 -53474142 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 405 292 14 0 chr2 197213776 197213914 -53473940 - L1MC4a LINE L1 -1316 6492 6361 1793 280 60 47 chr2 197213925 197214991 -53472863 - L1ME2 LINE L1 -10 6154 5078 293 243 14 14 chr2 197215089 197215163 -53472691 - MER58 DNA MER1_type -99 242 169 5083 118 19 0 chr2 197215231 197216000 -53471854 + L1PA13 LINE L1 5380 6163 0 1270 303 37 17 chr2 197216246 197216649 -53471205 + MER77 LTR ERV1 187 597 -8 488 269 29 18 chr2 197216882 197217053 -53470801 + L1M4 LINE L1 4532 4704 -1442 372 270 97 46 chr2 197217309 197217546 -53470308 + L1M4 LINE L1 3549 3797 -2349 771 220 26 37 chr2 197218641 197218832 -53469022 + MER97c DNA MER1_type? 242 430 -660 886 101 0 43 chr2 197219012 197219151 -53468703 + FLAM_C SINE Alu 1 133 0 259 211 78 22 chr2 197219290 197219380 -53468474 + L1ME3A LINE L1 6042 6136 -34 923 104 15 0 chr2 197219705 197219840 -53468014 - AluSg/x SINE Alu 0 312 176 2135 118 0 26 chr2 197221190 197221495 -53466359 - AluSx SINE Alu -15 297 1 6961 60 12 0 chr2 197221534 197223163 -53464691 - L1PA6 LINE L1 0 6154 4553 390 337 107 29 chr2 197225197 197225506 -53462348 - MLT1H LTR MaLR -195 354 22 2839 3 0 0 chr2 197225901 197226212 -53461642 + AluYa5 SINE Alu 1 311 0 998 257 5 5 chr2 197227467 197227685 -53460169 + MER58A DNA MER1_type 1 218 -6 23 68 0 0 chr2 197227949 197227993 -53459861 + AT_rich Low_complexity Low_complexity 1 44 0 302 245 51 20 chr2 197228861 197228959 -53458895 - MLT1E LTR MaLR -8 585 485 28 48 0 0 chr2 197229845 197229887 -53457967 + AT_rich Low_complexity Low_complexity 1 42 0 2829 171 56 10 chr2 197229887 197230554 -53457300 - L1MA4A LINE L1 -23 6277 5532 27 73 0 0 chr2 197231622 197231677 -53456177 + AT_rich Low_complexity Low_complexity 1 55 0 1760 131 0 101 chr2 197231697 197232025 -53455829 - AluSx SINE Alu -17 295 1 287 306 45 38 chr2 197232343 197232500 -53455354 - MLT1J1 LTR MaLR -286 160 3 2786 7 0 0 chr2 197232794 197233098 -53454756 + AluYa5 SINE Alu 1 304 -7 22 35 0 0 chr2 197233886 197233915 -53453939 + AT_rich Low_complexity Low_complexity 1 29 0 1980 222 47 4 chr2 197233995 197234481 -53453373 + L1PBa LINE L1 6 512 -6351 310 276 29 29 chr2 197235656 197235761 -53452093 + HUERS-P3 LTR ERV1 8667 8771 -148 764 232 46 11 chr2 197236108 197236334 -53451520 + MER61D LTR ERV1 338 1232 -18 1288 244 100 17 chr2 197236355 197237634 -53450220 + L1MC4 LINE L1 4732 6153 -11 290 258 296 0 chr2 197239586 197239718 -53448136 - MER5A DNA MER1_type -10 179 9 1884 252 48 15 chr2 197239924 197240464 -53447390 - MER74A LTR ERVL 0 558 1 281 344 38 38 chr2 197241319 197241479 -53446375 - MER5A DNA MER1_type -22 167 8 307 191 29 48 chr2 197242087 197242192 -53445662 + L1ME4a LINE L1 5861 5963 -158 187 304 25 25 chr2 197242206 197242285 -53445569 + MIR SINE MIR 65 143 -65 225 0 0 0 chr2 197242640 197242665 -53445189 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 25 0 0 0 chr2 197242831 197242856 -53444998 + AT_rich Low_complexity Low_complexity 1 25 0 562 312 98 32 chr2 197244233 197244518 -53443336 - L2 LINE L2 -2 3311 3008 584 143 0 0 chr2 197245934 197246025 -53441829 + AluY SINE Alu 210 300 -11 1929 140 14 0 chr2 197246573 197246903 -53440951 - AluSx SINE Alu 0 335 2 313 301 35 63 chr2 197247574 197247717 -53440137 + MIR SINE MIR 84 222 -40 225 0 0 0 chr2 197248306 197248331 -53439523 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 3998 152 65 4 chr2 197249156 197249836 -53438018 + MER50 LTR ERV1 1 721 -13 2128 60 77 0 chr2 197249915 197250200 -53437654 - AluY SINE Alu -4 307 1 425 283 58 39 chr2 197251630 197251835 -53436019 + L1MC5 LINE L1 7017 7225 -736 1688 205 0 0 chr2 197253511 197253809 -53434045 + AluJb SINE Alu 1 298 -14 315 0 0 0 chr2 197253822 197253857 -53433997 + (CA)n Simple_repeat Simple_repeat 1 35 0 583 246 62 85 chr2 197254256 197254467 -53433387 - MER58A DNA MER1_type -15 209 4 225 307 13 40 chr2 197257706 197257781 -53430073 + L2 LINE L2 3241 3313 0 8711 156 24 6 chr2 197258493 197259301 -53428553 + Tigger1 DNA MER2_type 2 794 -1624 2129 125 15 32 chr2 197259301 197259644 -53428210 - MER1B DNA MER1_type 0 337 1 8711 156 24 6 chr2 197259644 197260686 -53427168 + Tigger1 DNA MER2_type 794 1980 -438 1850 143 63 39 chr2 197260686 197261021 -53426833 - MER61A LTR ERV1 0 343 1 663 92 0 0 chr2 197261026 197261113 -53426741 - MER61A-int LTR ERV1 -5 5212 5126 354 260 98 8 chr2 197311382 197311505 -53376349 + ERVL LTR ERVL 4488 4621 -1143 538 308 69 38 chr2 197311631 197312183 -53375671 + ERVL LTR ERVL 4728 5296 -189 1980 252 33 11 chr2 197312472 197313067 -53374787 + L1PA15-16 LINE L1 2336 2985 -3933 1195 118 32 0 chr2 197313071 197313258 -53374596 + MSTA LTR MaLR 1 193 -235 767 116 9 0 chr2 197313260 197313372 -53374482 + AluY SINE Alu 1 113 -198 1011 208 17 4 chr2 197313372 197313603 -53374251 - L1 LINE L1 -1503 4643 4410 1082 167 61 5 chr2 197313625 197313823 -53374031 - MSTA LTR MaLR -219 209 1 5376 223 33 32 chr2 197313823 197315392 -53372462 + L1 LINE L1 3853 5423 -733 2403 64 3 0 chr2 197315393 197315689 -53372165 - AluY SINE Alu -14 297 1 201 176 0 0 chr2 197315913 197315947 -53371907 + T-rich Low_complexity Low_complexity 1 34 0 269 241 35 0 chr2 197317208 197317266 -53370588 - L2 LINE L2 -94 3219 3160 21 0 0 0 chr2 197317314 197317335 -53370519 + AT_rich Low_complexity Low_complexity 1 21 0 245 433 47 7 chr2 197317549 197317824 -53370030 - L2 LINE L2 -349 2965 2680 1970 138 44 41 chr2 197317839 197318202 -53369652 + THE1B LTR MaLR 1 364 0 2426 47 10 13 chr2 197318375 197318674 -53369180 + AluY SINE Alu 1 298 -13 15935 193 83 28 chr2 197318978 197319664 -53368190 + L1MA2 LINE L1 20 666 -6899 2270 116 3 0 chr2 197319664 197319974 -53367880 + AluSq SINE Alu 3 313 0 15935 193 83 28 chr2 197319974 197322190 -53365664 + L1MA2 LINE L1 666 2757 -4808 1829 157 5 61 chr2 197322190 197322565 -53365289 - THE1A LTR MaLR -1 354 1 15935 193 83 28 chr2 197322565 197322843 -53365011 + L1MA2 LINE L1 2757 3018 -4547 335 60 20 0 chr2 197322843 197322893 -53364961 + (CA)n Simple_repeat Simple_repeat 2 52 0 15935 193 83 28 chr2 197322893 197324038 -53363816 + L1MA2 LINE L1 3018 4592 -2973 4226 26 0 0 chr2 197324012 197324508 -53363346 + L1HS LINE L1 7079 7574 0 * 9589 175 21 27 chr2 197324498 197324878 -53362976 + L1MA2 LINE L1 4545 4926 -2797 222 37 0 0 chr2 197324878 197324905 -53362949 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 1954 161 0 7 chr2 197324911 197325221 -53362633 + AluSx SINE Alu 1 308 -4 9589 175 21 27 chr2 197325221 197327976 -53359878 + L1MA2 LINE L1 4931 7667 -56 204 196 18 18 chr2 197327980 197328036 -53359818 + (TA)n Simple_repeat Simple_repeat 2 57 0 267 102 0 0 chr2 197328037 197328086 -53359768 + L1MA3 LINE L1 6257 6305 0 26 0 0 0 chr2 197328771 197328797 -53359057 + AT_rich Low_complexity Low_complexity 1 26 0 1390 214 18 27 chr2 197329009 197329346 -53358508 - MER44D DNA MER2_type -3 606 3 22 0 0 0 chr2 197329438 197329460 -53358394 + AT_rich Low_complexity Low_complexity 1 22 0 2476 54 0 0 chr2 197329534 197329831 -53358023 - AluY SINE Alu -12 299 3 487 239 122 35 chr2 197330947 197331144 -53356710 - L1ME2 LINE L1 -16 6148 5935 * 6382 37 8 2 chr2 197331140 197331926 -53355928 - L1PA5 LINE L1 0 6154 5365 575 262 52 39 chr2 197331920 197332153 -53355701 - L1ME2 LINE L1 -218 5944 5709 * 1886 135 32 199 chr2 197332160 197332247 -53355607 - THE1C LTR MaLR 0 364 264 2072 138 0 0 chr2 197332247 197332537 -53355317 - AluSx SINE Alu -22 290 1 1886 135 32 199 chr2 197332537 197332886 -53354968 - THE1C LTR MaLR -100 264 1 626 255 95 46 chr2 197332909 197333519 -53354335 - L1ME2 LINE L1 -485 5679 5028 336 100 250 0 chr2 197333521 197333581 -53354273 + MADE1 DNA Mariner 6 80 0 2469 105 8 24 chr2 197333831 197334201 -53353653 - THE1B LTR MaLR 0 364 1 315 298 70 9 chr2 197334223 197334337 -53353517 - LTR16A LTR ERVL -185 265 145 250 154 0 0 chr2 197334391 197334430 -53353424 - MER58 DNA MER1_type -176 39 1 457 264 13 29 chr2 197334537 197334753 -53353101 - L1ME2 LINE L1 -2148 3998 3785 24 32 0 0 chr2 197335504 197335535 -53352319 + AT_rich Low_complexity Low_complexity 1 31 0 255 254 0 0 chr2 197335716 197335775 -53352079 + A-rich Low_complexity Low_complexity 1 59 0 3033 211 81 48 chr2 197336181 197336971 -53350883 + L1MC3 LINE L1 6718 7550 -235 2491 53 0 3 chr2 197336971 197337273 -53350581 + AluY SINE Alu 1 301 -10 3033 211 81 48 chr2 197337273 197337500 -53350354 + L1MC3 LINE L1 7550 7768 -17 1588 256 82 27 chr2 197338102 197338700 -53349154 - L1ME1 LINE L1 -5 6161 5531 7207 171 8 9 chr2 197339877 197341154 -53346700 - HSMAR2 DNA Mariner -2 1300 25 3791 64 0 0 chr2 197341163 197341646 -53346208 - L1PA7 LINE L1 -1 6153 5671 33 43 0 0 chr2 197342835 197342882 -53344972 + AT_rich Low_complexity Low_complexity 1 47 0 219 323 100 62 chr2 197343262 197343392 -53344462 - MIR SINE MIR -109 153 19 225 362 36 7 chr2 197343555 197343693 -53344161 + L1MEc LINE L1 107 248 -6148 360 180 0 0 chr2 197343703 197343764 -53344090 - LTR40b LTR ERVL -1 461 401 478 281 106 55 chr2 197344519 197345747 -53342107 + L1MEc LINE L1 511 1763 -4452 1130 267 42 48 chr2 197345845 197346508 -53341346 + L1M4 LINE L1 3791 4449 -1697 947 231 94 46 chr2 197346517 197346954 -53340900 + L1M4 LINE L1 4784 5241 -905 327 312 23 98 chr2 197346997 197347212 -53340642 - MLT1I LTR MaLR -121 288 90 2397 48 0 32 chr2 197347318 197347633 -53340221 - AluY SINE Alu -6 305 1 7331 44 4 0 chr2 197349001 197350659 -53337195 - L1PA5 LINE L1 -5 6149 4485 24 0 0 0 chr2 197351294 197351318 -53336536 + AT_rich Low_complexity Low_complexity 1 24 0 1980 94 42 39 chr2 197351405 197351714 -53336140 + AluY SINE Alu 1 310 -1 243 204 0 0 chr2 197353482 197353536 -53334318 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 188 375 0 0 chr2 197353721 197353793 -53334061 - L2 LINE L2 0 3272 3201 10001 199 40 32 chr2 197354169 197355684 -53332170 + L1M1 LINE L1 12 1514 -6051 1572 177 13 32 chr2 197355684 197355994 -53331860 + AluJb SINE Alu 1 304 -8 10001 199 40 32 chr2 197355994 197356213 -53331641 + L1M1 LINE L1 1514 1730 -5835 1886 142 4 0 chr2 197356213 197356488 -53331366 + AluSx SINE Alu 1 276 -36 10001 199 40 32 chr2 197356488 197358764 -53329090 + L1M1 LINE L1 1730 4726 -2839 12839 40 0 2 chr2 197358764 197361108 -53326746 + L1PA5 LINE L1 3810 6154 0 10001 199 40 32 chr2 197361108 197362246 -53325608 + L1M1 LINE L1 4726 5854 -1711 236 386 42 5 chr2 197363181 197363370 -53324484 + MER117 DNA MER1_type 2 197 0 286 295 115 41 chr2 197364159 197364281 -53323573 + L2 LINE L2 3182 3312 -1 10662 215 54 44 chr2 197364770 197369541 -53318313 - L1MA9 LINE L1 0 6200 1394 1764 298 88 19 chr2 197369585 197371333 -53316521 - L1MA9 LINE L1 -4495 1540 12 220 324 66 59 chr2 197371354 197371490 -53316364 - MIR3 SINE MIR -3 205 69 776 206 12 6 chr2 197371761 197371921 -53315933 + MER6B DNA MER2_type 5 165 -45 41 36 0 0 chr2 197373179 197373234 -53314620 + AT_rich Low_complexity Low_complexity 1 55 0 282 321 36 36 chr2 197373297 197373462 -53314392 + L2 LINE L2 2326 2490 -824 7641 24 0 0 chr2 197374233 197375269 -53312585 - L1PA3 LINE L1 0 6155 5121 13452 27 0 0 chr2 197375269 197376859 -53310995 + L1P LINE L1 3389 4978 -1168 32 75 0 0 chr2 197376917 197376984 -53310870 + AT_rich Low_complexity Low_complexity 1 67 0 203 184 0 0 chr2 197378083 197378121 -53309733 + T-rich Low_complexity Low_complexity 4 41 0 29 28 0 0 chr2 197378172 197378208 -53309646 + AT_rich Low_complexity Low_complexity 1 36 0 34 42 0 0 chr2 197378375 197378423 -53309431 + AT_rich Low_complexity Low_complexity 1 48 0 1680 183 84 0 chr2 197378452 197378808 -53309046 + MLT1B LTR MaLR 5 390 0 676 235 58 22 chr2 197379404 197379589 -53308265 - MER3 DNA MER1_type -85 124 1 2193 216 48 6 chr2 197380346 197380850 -53307004 - L1MC2 LINE L1 -7 6337 5813 472 218 160 16 chr2 197380892 197381080 -53306774 - L1MD3 LINE L1 -11 7984 7770 1765 143 44 0 chr2 197381721 197382032 -53305822 - AluSx SINE Alu 0 323 1 215 316 71 110 chr2 197382624 197382950 -53304904 + L2 LINE L2 2425 2737 -577 26 30 0 0 chr2 197383856 197383889 -53303965 + AT_rich Low_complexity Low_complexity 1 33 0 2110 127 0 10 chr2 197383922 197384222 -53303632 - AluSg SINE Alu -13 297 1 485 357 33 21 chr2 197384537 197384778 -53303076 + MIR SINE MIR 18 261 -1 469 169 0 0 chr2 197385760 197385837 -53302017 + MER61E LTR ERV1 378 454 -115 406 272 161 44 chr2 197386048 197386228 -53301626 + MIR SINE MIR 14 214 -48 1862 206 81 21 chr2 197387086 197387395 -53300459 + MER67D LTR ERV1 1 351 -163 2246 125 25 11 chr2 197387395 197387754 -53300100 + THE1B LTR MaLR 1 364 0 1862 206 81 21 chr2 197387754 197387925 -53299929 + MER67D LTR ERV1 351 510 -4 582 312 12 6 chr2 197391033 197391203 -53296651 - MER5B DNA MER1_type 0 178 8 1900 145 10 3 chr2 197391275 197391571 -53296283 + AluSx SINE Alu 1 298 -14 466 212 150 28 chr2 197391759 197391918 -53295936 - MIR SINE MIR -44 218 37 21 36 0 0 chr2 197391952 197391980 -53295874 + AT_rich Low_complexity Low_complexity 1 28 0 244 297 0 14 chr2 197392043 197392117 -53295737 - L2 LINE L2 0 3313 3241 186 308 231 6 chr2 197392470 197392510 -53295344 - MIR SINE MIR -8 254 224 1761 218 94 26 chr2 197392510 197392979 -53294875 - MLT1D LTR MaLR 0 505 5 186 308 231 6 chr2 197392979 197393107 -53294747 - MIR SINE MIR -38 224 48 2490 178 86 26 chr2 197393782 197394344 -53293510 + Tigger7 DNA MER2_type 3 2487 0 26 50 0 0 chr2 197394800 197394840 -53293014 + AT_rich Low_complexity Low_complexity 1 40 0 305 309 185 5 chr2 197394850 197395072 -53292782 - MLT1F LTR MaLR 0 590 331 518 216 72 0 chr2 197395105 197395230 -53292624 + MER76 LTR ERV 13 146 -542 1146 270 76 36 chr2 197395236 197395655 -53292199 + MER76 LTR ERV 251 686 -2 237 33 0 0 chr2 197395673 197395703 -53292151 + (TG)n Simple_repeat Simple_repeat 1 30 0 278 353 48 44 chr2 197395779 197396031 -53291823 - MLT1F LTR MaLR -327 263 11 269 217 14 29 chr2 197396396 197396465 -53291389 + L2 LINE L2 3242 3309 -4 511 290 71 66 chr2 197397710 197398075 -53289779 + L1MDa LINE L1 1367 1733 -4807 26 30 0 0 chr2 197398188 197398221 -53289633 + AT_rich Low_complexity Low_complexity 1 33 0 659 221 20 119 chr2 197398239 197398542 -53289312 - L1MA5 LINE L1 -1 6299 6027 259 233 55 27 chr2 197398998 197399071 -53288783 + L1M4 LINE L1 3498 3572 -2574 297 242 124 31 chr2 197399495 197399656 -53288198 + L1M4 LINE L1 4027 4202 -1944 767 68 0 0 chr2 197399748 197399851 -53288003 + L1PA8 LINE L1 6064 6166 -6 642 246 97 34 chr2 197399872 197400286 -53287568 + L1M4 LINE L1 4377 4816 -1330 2814 10 0 0 chr2 197400888 197401199 -53286655 - AluYb8 SINE Alu -7 311 1 324 0 0 0 chr2 197401585 197401621 -53286233 + (CA)n Simple_repeat Simple_repeat 1 36 0 982 262 93 12 chr2 197401654 197401975 -53285879 + LTR16A LTR ERVL 16 362 -88 35 54 0 0 chr2 197402006 197402062 -53285792 + AT_rich Low_complexity Low_complexity 1 56 0 1247 193 24 28 chr2 197403642 197403932 -53283922 + AluJb SINE Alu 33 321 0 245 232 207 0 chr2 197404081 197404163 -53283691 + MIR SINE MIR 28 126 -136 1158 226 157 12 chr2 197404188 197404507 -53283347 + MLT1A2 LTR MaLR 10 374 0 340 304 121 59 chr2 197404511 197404784 -53283070 - LTR16A LTR ERVL -30 420 131 22 0 0 0 chr2 197406209 197406231 -53281623 + AT_rich Low_complexity Low_complexity 1 22 0 917 263 72 50 chr2 197406509 197406928 -53280926 - LTR16A1 LTR ERVL -3 454 27 2237 246 28 13 chr2 197406928 197407644 -53280210 - L1MCa LINE L1 -3167 3259 2533 7274 209 17 20 chr2 197407646 197408258 -53279596 - L1PB4 LINE L1 -11 6145 5533 1686 66 0 0 chr2 197408258 197408469 -53279385 - AluY SINE Alu 0 311 101 7274 209 17 20 chr2 197408469 197410476 -53277378 - L1PB4 LINE L1 -623 5533 3462 1118 165 7 54 chr2 197410478 197410799 -53277055 - L1MCa LINE L1 -3953 2473 2250 481 346 73 44 chr2 197410807 197411353 -53276501 - HAL1 LINE L1 -113 2394 1833 410 229 18 9 chr2 197411779 197411888 -53275966 - HAL1 LINE L1 -1602 905 796 28 0 0 0 chr2 197413317 197413345 -53274509 + AT_rich Low_complexity Low_complexity 1 28 0 375 23 0 0 chr2 197413664 197413708 -53274146 + (TG)n Simple_repeat Simple_repeat 1 44 0 1656 180 3 16 chr2 197413829 197414134 -53273720 + AluJo SINE Alu 12 312 0 190 274 0 0 chr2 197414256 197414307 -53273547 + L2 LINE L2 3263 3313 0 335 278 40 20 chr2 197414681 197414856 -53272998 - L1ME LINE L1 -471 5691 5513 29 60 0 0 chr2 197414860 197414910 -53272944 + AT_rich Low_complexity Low_complexity 1 50 0 222 91 0 0 chr2 197415061 197415094 -53272760 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 283 212 91 10 chr2 197415104 197415203 -53272651 - L1MC5 LINE L1 -516 7445 7339 306 294 119 18 chr2 197415206 197415492 -53272362 - L1MC4a LINE L1 -1829 5979 5665 584 318 98 53 chr2 197415668 197416268 -53271586 - L1MC4a LINE L1 -3313 2833 2207 2223 81 7 3 chr2 197416279 197416574 -53271280 - AluY SINE Alu -15 296 1 327 290 97 65 chr2 197416840 197417026 -53270828 + MIR SINE MIR 15 206 -56 293 362 22 0 chr2 197417627 197417765 -53270089 + MIR SINE MIR 112 252 -10 415 323 22 45 chr2 197418212 197418435 -53269419 - LTR16C LTR ERVL -2 489 272 200 295 32 11 chr2 197418872 197418967 -53268887 + CT-rich Low_complexity Low_complexity 1 97 0 1786 221 52 25 chr2 197419062 197419506 -53268348 - MLT1C LTR MaLR -8 459 4 335 289 156 33 chr2 197420764 197420975 -53266879 + MIR SINE MIR 3 239 -23 201 191 0 48 chr2 197421338 197421380 -53266474 + polypurine Low_complexity Low_complexity 3 42 0 28 29 0 0 chr2 197422357 197422392 -53265462 + AT_rich Low_complexity Low_complexity 1 35 0 251 230 23 23 chr2 197422781 197422868 -53264986 + (TA)n Simple_repeat Simple_repeat 1 87 0 384 130 0 0 chr2 197422950 197423019 -53264835 + (TA)n Simple_repeat Simple_repeat 2 70 0 570 184 43 93 chr2 197423031 197423217 -53264637 - MLT2C1 LTR ERVL -19 395 196 344 97 74 51 chr2 197423920 197424095 -53263759 + (TA)n Simple_repeat Simple_repeat 1 179 0 26 82 0 0 chr2 197424133 197424194 -53263660 + AT_rich Low_complexity Low_complexity 1 61 0 827 197 20 70 chr2 197424393 197424637 -53263217 - MER54A LTR ERVL -111 790 559 2608 205 19 44 chr2 197424676 197425241 -53262613 - MER54A LTR ERVL -348 553 3 229 340 97 0 chr2 197427780 197427883 -53259971 - MIR3 SINE MIR -14 194 82 21 36 0 0 chr2 197429164 197429192 -53258662 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr2 197429345 197429384 -53258470 + AT_rich Low_complexity Low_complexity 1 39 0 27 0 0 0 chr2 197429514 197429541 -53258313 + AT_rich Low_complexity Low_complexity 1 27 0 213 208 0 0 chr2 197429900 197429948 -53257906 + (CA)n Simple_repeat Simple_repeat 1 48 0 299 22 0 44 chr2 197430105 197430150 -53257704 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 42035 41 21 1 chr2 197430150 197436169 -53251685 - L1PA3 LINE L1 -13 6142 1 274 270 87 52 chr2 197436273 197436388 -53251466 + L2 LINE L2 3154 3272 0 661 146 0 15 chr2 197438392 197438522 -53249332 + (CCCCCT)n Simple_repeat Simple_repeat 6 133 0 2461 60 0 0 chr2 197438553 197438855 -53248999 + AluY SINE Alu 1 302 -9 470 316 86 40 chr2 197439348 197439626 -53248228 + L3 LINE CR1 1128 1418 -159 2038 143 19 30 chr2 197440447 197440812 -53247042 - THE1C LTR MaLR -14 361 1 28 79 0 0 chr2 197441620 197441683 -53246171 + AT_rich Low_complexity Low_complexity 1 63 0 3967 208 36 29 chr2 197442969 197444409 -53243445 + L1MB3 LINE L1 4735 6182 -1 23 33 0 0 chr2 197445048 197445078 -53242776 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr2 197445097 197445133 -53242721 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr2 197445396 197445431 -53242423 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 197445472 197445494 -53242360 + AT_rich Low_complexity Low_complexity 1 22 0 258 32 0 0 chr2 197446221 197446252 -53241602 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 209 374 95 11 chr2 197446392 197446582 -53241272 + MIR SINE MIR 2 207 -55 24 0 0 0 chr2 197446632 197446656 -53241198 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 197447920 197447941 -53239913 + AT_rich Low_complexity Low_complexity 1 21 0 2164 132 0 0 chr2 197448327 197448637 -53239217 + AluSq SINE Alu 1 310 -3 1917 136 7 7 chr2 197448651 197448945 -53238909 + AluSx SINE Alu 1 294 -18 884 173 188 0 chr2 197449063 197449260 -53238594 + L1PA16 LINE L1 5922 6155 -11 338 221 66 44 chr2 197449259 197449395 -53238459 + L1ME LINE L1 5648 5786 -335 * 406 179 0 18 chr2 197449402 197449514 -53238340 + (TA)n Simple_repeat Simple_repeat 1 110 0 1397 258 94 16 chr2 197450256 197450691 -53237163 - MLT1D LTR MaLR -6 499 31 23 78 0 0 chr2 197450846 197450897 -53236957 + AT_rich Low_complexity Low_complexity 1 51 0 1843 119 7 29 chr2 197450982 197451260 -53236594 - AluSx SINE Alu -7 305 34 254 178 140 140 chr2 197451554 197451711 -53236143 - MLT1H LTR MaLR -392 157 1 211 180 60 0 chr2 197452410 197452460 -53235394 + (CAAGA)n Simple_repeat Simple_repeat 4 56 0 300 53 0 0 chr2 197453432 197453470 -53234384 + (TA)n Simple_repeat Simple_repeat 2 39 0 260 245 21 0 chr2 197453838 197453932 -53233922 + (CATA)n Simple_repeat Simple_repeat 4 99 0 2112 162 44 33 chr2 197454601 197455148 -53232706 + MLT2A2 LTR ERVL 1 554 0 4351 185 40 11 chr2 197456371 197457356 -53230498 + L1MA4 LINE L1 4807 5955 -345 1952 73 0 51 chr2 197457356 197457629 -53230225 + AluY SINE Alu 41 299 -12 4351 185 40 11 chr2 197457629 197457958 -53229896 + L1MA4 LINE L1 5955 6273 -27 21 0 0 0 chr2 197462372 197462393 -53225461 + AT_rich Low_complexity Low_complexity 1 21 0 19166 185 24 16 chr2 197462671 197466984 -53220870 + L1M1 LINE L1 14 4361 -3204 346 131 111 81 chr2 197466985 197467084 -53220770 + L1M1 LINE L1 2678 2779 -4786 452 245 33 13 chr2 197467090 197467241 -53220613 + L1M1 LINE L1 4370 4523 -3042 * 13040 209 39 9 chr2 197467232 197469867 -53217987 + L1PA13 LINE L1 2014 4831 -2753 2753 10 0 3 chr2 197469867 197470176 -53217678 + AluYa5 SINE Alu 1 308 -3 13040 209 39 9 chr2 197470176 197471573 -53216281 + L1PA13 LINE L1 4831 6185 -1399 5140 119 28 18 chr2 197471602 197472457 -53215397 + L1PA13 LINE L1 6733 7596 -5 3161 120 33 8 chr2 197472460 197472977 -53214877 + L1MA1 LINE L1 5773 6302 0 465 97 0 0 chr2 197472996 197473068 -53214786 + L1MA2 LINE L1 6233 6304 0 400 238 115 123 chr2 197474231 197474466 -53213388 - MIR SINE MIR -27 235 3 21 0 0 0 chr2 197474737 197474758 -53213096 + AT_rich Low_complexity Low_complexity 1 21 0 182 109 91 91 chr2 197474774 197474829 -53213025 + MIR SINE MIR 118 172 -90 25 0 0 0 chr2 197475486 197475511 -53212343 + AT_rich Low_complexity Low_complexity 1 25 0 246 314 58 15 chr2 197475929 197476066 -53211788 + MLT1J LTR MaLR 107 249 -262 419 318 92 35 chr2 197476625 197476971 -53210883 - MLT1I LTR MaLR -23 386 21 1880 174 11 14 chr2 197477086 197477453 -53210401 - L1PB4 LINE L1 -2 6154 5789 228 137 0 39 chr2 197477479 197477530 -53210324 + L1MC4 LINE L1 6658 6706 -1336 * 292 80 120 107 chr2 197477508 197477583 -53210271 - L1PB4 LINE L1 -510 5793 5718 2529 163 45 31 chr2 197477611 197478296 -53209558 - L1P5 LINE L1 -387 5769 5074 1169 235 63 32 chr2 197478582 197478927 -53208927 - MLT1A1 LTR MaLR -4 501 1 396 227 0 11 chr2 197478995 197479083 -53208771 + AluS SINE Alu 2 88 -214 5335 157 45 14 chr2 197479086 197480395 -53207459 - L1MA3 LINE L1 -69 6236 4885 1629 262 123 28 chr2 197480737 197481596 -53206258 - L1MCc LINE L1 -2906 4035 3095 312 102 0 0 chr2 197481598 197481647 -53206207 + (CA)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr2 197481688 197481716 -53206138 + AT_rich Low_complexity Low_complexity 1 28 0 328 295 70 50 chr2 197481841 197482160 -53205694 - L1MCc LINE L1 -4896 2198 1732 247 152 0 0 chr2 197482204 197482250 -53205604 - L1MA4A LINE L1 -6 6297 6252 1894 191 29 8 chr2 197482250 197482628 -53205226 + L1MA4 LINE L1 5853 6238 -62 508 291 26 33 chr2 197482627 197482993 -53204861 - L1MCc LINE L1 -4918 1505 1348 * 238 250 0 48 chr2 197483040 197483124 -53204730 - L1MCc LINE L1 -5169 1254 1175 657 294 93 34 chr2 197483517 197483902 -53203952 - L1MCc LINE L1 -5981 442 35 1332 186 17 75 chr2 197483933 197484228 -53203626 + AluJb SINE Alu 11 288 -24 287 346 109 34 chr2 197486873 197487223 -53200631 + L2 LINE L2 2472 2847 -467 32 0 0 0 chr2 197487556 197487588 -53200266 + AT_rich Low_complexity Low_complexity 1 32 0 316 335 134 6 chr2 197487721 197487885 -53199969 - L1MC/D LINE L1 -2064 5744 5560 26 0 0 0 chr2 197490480 197490506 -53197348 + AT_rich Low_complexity Low_complexity 1 26 0 7458 31 0 0 chr2 197490976 197491969 -53195885 - L1PA4 LINE L1 -5 6150 5161 3549 32 0 0 chr2 197491969 197492401 -53195453 + L1PA4 LINE L1 4729 5160 -986 25 51 0 0 chr2 197492531 197492570 -53195284 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr2 197492583 197492620 -53195234 + AT_rich Low_complexity Low_complexity 1 37 0 1029 250 39 103 chr2 197492924 197493641 -53194213 - L1MEc LINE L1 -4148 2248 1578 185 180 20 0 chr2 197494747 197494797 -53193057 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 22 35 0 0 chr2 197495830 197495859 -53191995 + AT_rich Low_complexity Low_complexity 1 29 0 1808 164 6 6 chr2 197495997 197496308 -53191546 + AluSx SINE Alu 1 311 -1 24 32 0 0 chr2 197496518 197496549 -53191305 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 197498446 197498474 -53189380 + AT_rich Low_complexity Low_complexity 1 28 0 5005 178 63 15 chr2 197498746 197500306 -53187548 + L1MA3 LINE L1 4660 6305 0 183 129 0 0 chr2 197500408 197500439 -53187415 + (TG)n Simple_repeat Simple_repeat 2 32 0 237 136 23 0 chr2 197500465 197500509 -53187345 - L1M1 LINE L1 -834 5471 5427 * 4787 182 74 14 chr2 197500506 197501582 -53186272 - L1M1 LINE L1 -1074 5072 3932 1346 213 3 16 chr2 197501583 197501897 -53185957 + L1M1 LINE L1 3606 3915 -2231 318 87 0 0 chr2 197502293 197502339 -53185515 + (TC)n Simple_repeat Simple_repeat 1 46 0 1634 262 99 61 chr2 197502639 197503680 -53184174 + L1MDb LINE L1 773 1773 -4633 292 160 14 0 chr2 197503680 197503789 -53184065 - Alu SINE Alu -17 283 245 1634 262 99 61 chr2 197503789 197503846 -53184008 + L1MDb LINE L1 1773 1826 -4580 1751 127 52 4 chr2 197503846 197504150 -53183704 - AluSg SINE Alu 0 319 3 1634 262 99 61 chr2 197504150 197504940 -53182914 + L1MDb LINE L1 1826 2827 -3579 332 329 20 0 chr2 197504948 197505153 -53182701 + L1MA10 LINE L1 5953 6320 -5 2373 54 0 10 chr2 197505170 197505465 -53182389 - AluY SINE Alu -19 292 1 400 325 60 17 chr2 197505471 197505705 -53182149 + L1ME LINE L1 5579 5822 -299 21 89 0 0 chr2 197506043 197506099 -53181755 + AT_rich Low_complexity Low_complexity 1 56 0 410 198 0 0 chr2 197506542 197506623 -53181231 + AluS SINE Alu 220 300 -1 443 180 22 34 chr2 197506990 197507168 -53180686 + (TGGG)n Simple_repeat Simple_repeat 4 179 0 216 202 19 48 chr2 197507171 197507275 -53180579 + G-rich Low_complexity Low_complexity 3 103 0 290 316 152 12 chr2 197507394 197507565 -53180289 + MIR SINE MIR 2 196 -66 854 119 7 33 chr2 197507763 197507914 -53179940 - L1PA15 LINE L1 -6 6159 6013 25 31 0 0 chr2 197509357 197509389 -53178465 + AT_rich Low_complexity Low_complexity 1 32 0 236 353 42 34 chr2 197509668 197509787 -53178067 - MLT1K LTR MaLR -299 289 170 380 226 139 0 chr2 197510461 197510576 -53177278 + L1MA10 LINE L1 6197 6327 -7 228 105 0 0 chr2 197510836 197510861 -53176993 + (TAA)n Simple_repeat Simple_repeat 2 29 -10 1496 201 3 3 chr2 197510861 197511150 -53176704 + AluSx SINE Alu 3 291 -21 228 105 0 0 chr2 197511150 197511162 -53176692 + (TAA)n Simple_repeat Simple_repeat 28 39 0 320 269 90 18 chr2 197511630 197511797 -53176057 + L1M4 LINE L1 765 943 -5599 300 27 0 0 chr2 197511800 197511837 -53176017 + (CA)n Simple_repeat Simple_repeat 2 38 0 245 267 0 0 chr2 197512255 197512315 -53175539 + (CATATA)n Simple_repeat Simple_repeat 4 63 0 226 260 8 79 chr2 197512513 197512595 -53175259 + L1ME LINE L1 5486 5557 -605 1810 113 15 4 chr2 197512595 197512860 -53174994 - AluSc SINE Alu -7 302 35 226 260 8 79 chr2 197512860 197512904 -53174950 + L1ME LINE L1 5557 5603 -559 1454 251 105 15 chr2 197513059 197513534 -53174320 + LTR40a LTR ERVL 2 519 0 29 0 0 0 chr2 197513872 197513901 -53173953 + AT_rich Low_complexity Low_complexity 1 29 0 1877 158 22 92 chr2 197514515 197514972 -53172882 + MER61B LTR ERV1 1 425 0 211 365 72 14 chr2 197515548 197515770 -53172084 + L2 LINE L2 843 1077 -2237 1357 139 0 5 chr2 197515904 197516145 -53171709 + AluSg/x SINE Alu 77 316 0 256 321 61 30 chr2 197516162 197516293 -53171561 + L2 LINE L2 2242 2376 -938 2257 85 12 6 chr2 197516446 197516774 -53171080 - L1PA8 LINE L1 -5 6167 5838 879 168 89 35 chr2 197516774 197516977 -53170877 + THE1C LTR MaLR 162 375 0 6526 172 90 41 chr2 197516977 197518693 -53169161 + L1MC1 LINE L1 774 2572 -3854 1133 162 66 60 chr2 197518681 197518983 -53168871 + L1MA8 LINE L1 5984 6287 -4 * 6516 245 52 11 chr2 197518986 197522755 -53165099 + L1MC1 LINE L1 2561 6612 -1 2487 127 0 11 chr2 197523194 197523571 -53164283 + THE1C LTR MaLR 1 373 -2 24 0 0 0 chr2 197523939 197523963 -53163891 + AT_rich Low_complexity Low_complexity 1 24 0 368 80 53 0 chr2 197524037 197524117 -53163737 - L1P5 LINE L1 -591 5565 5477 3359 33 0 0 chr2 197524117 197524513 -53163341 + L1PA3 LINE L1 5756 6152 -3 492 254 12 30 chr2 197526093 197526262 -53161592 - L1MB8 LINE L1 -6 6172 6007 1688 201 19 75 chr2 197526288 197526800 -53161054 - L1MB8 LINE L1 -311 5867 5389 2172 316 39 33 chr2 197527719 197528633 -53159221 - L1M4b LINE L1 -5929 930 11 207 167 0 0 chr2 197528698 197528740 -53159114 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr2 197529213 197529234 -53158620 + AT_rich Low_complexity Low_complexity 1 21 0 210 196 46 6 chr2 197532559 197532732 -53155122 + (TA)n Simple_repeat Simple_repeat 1 180 0 310 176 36 12 chr2 197532794 197532959 -53154895 + (TA)n Simple_repeat Simple_repeat 2 170 0 253 204 36 0 chr2 197532973 197533110 -53154744 + (TA)n Simple_repeat Simple_repeat 1 142 0 392 217 17 6 chr2 197533143 197533318 -53154536 + (TA)n Simple_repeat Simple_repeat 1 177 0 251 177 16 0 chr2 197533393 197533455 -53154399 + (TA)n Simple_repeat Simple_repeat 2 64 0 300 196 15 128 chr2 197533461 197533594 -53154260 - L1MC4 LINE L1 -1339 6703 6586 26 88 0 0 chr2 197533600 197533668 -53154186 + AT_rich Low_complexity Low_complexity 1 68 0 189 171 0 0 chr2 197534252 197534287 -53153567 + (CATA)n Simple_repeat Simple_repeat 2 36 0 21 71 0 0 chr2 197534294 197534336 -53153518 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr2 197534768 197534797 -53153057 + AT_rich Low_complexity Low_complexity 1 29 0 38 0 0 0 chr2 197534902 197534940 -53152914 + AT_rich Low_complexity Low_complexity 1 38 0 2194 112 3 3 chr2 197535811 197536115 -53151739 + AluSg SINE Alu 1 304 -6 330 216 0 0 chr2 197536115 197536189 -53151665 + (CATA)n Simple_repeat Simple_repeat 3 76 0 2452 58 3 0 chr2 197536917 197537227 -53150627 + AluY SINE Alu 1 311 0 501 332 61 20 chr2 197537388 197537584 -53150270 + MIR SINE MIR 44 247 -15 752 169 14 0 chr2 197537782 197537924 -53149930 + L1PB4 LINE L1 6013 6156 0 21 57 0 0 chr2 197538003 197538038 -53149816 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 197539616 197539638 -53148216 + AT_rich Low_complexity Low_complexity 1 22 0 234 160 0 0 chr2 197541834 197541884 -53145970 + (TA)n Simple_repeat Simple_repeat 2 51 0 28 91 0 0 chr2 197541946 197542023 -53145831 + AT_rich Low_complexity Low_complexity 1 77 0 260 167 67 0 chr2 197542961 197543021 -53144833 + L1MC4 LINE L1 6640 6703 -1339 246 172 78 0 chr2 197542978 197543042 -53144812 - L1MCa LINE L1 -4362 2064 1996 * 182 312 0 54 chr2 197543582 197543675 -53144179 - L2 LINE L2 0 3272 3185 6419 200 151 20 chr2 197543734 197545253 -53142601 - MER52A LTR ERV1 0 1755 39 246 361 60 8 chr2 197545271 197545404 -53142450 - MIR SINE MIR -118 144 5 8999 27 6 0 chr2 197545511 197547349 -53140505 + L1PA2 LINE L1 4304 6151 -4 317 366 13 13 chr2 197547632 197547785 -53140069 + MIR SINE MIR 54 206 -56 7260 150 13 27 chr2 197548027 197549346 -53138508 - HSMAR2 DNA Mariner -1 1301 2 26 0 0 0 chr2 197549405 197549431 -53138423 + AT_rich Low_complexity Low_complexity 1 26 0 411 320 39 7 chr2 197549493 197549646 -53138208 + HAL1 LINE L1 467 624 -1883 305 295 131 29 chr2 197549753 197549997 -53137857 + HAL1 LINE L1 788 1056 -1451 4647 170 22 36 chr2 197550035 197550988 -53136866 + L1MC1 LINE L1 5377 6316 -17 254 282 159 12 chr2 197551008 197551260 -53136594 + HAL1 LINE L1 1067 1355 -1152 1902 141 3 0 chr2 197551555 197551838 -53136016 + AluSq SINE Alu 3 286 -27 357 330 121 49 chr2 197551945 197552415 -53135439 - L2 LINE L2 -827 2487 1984 2097 128 0 3 chr2 197552618 197552924 -53134930 + AluSg SINE Alu 2 306 -4 31 26 0 0 chr2 197553023 197553061 -53134793 + AT_rich Low_complexity Low_complexity 1 38 0 1905 189 15 27 chr2 197553291 197553698 -53134156 - L1MD2 LINE L1 -362 5997 5596 4786 256 82 47 chr2 197553706 197553922 -53133932 - L1MDa LINE L1 -4673 1867 1660 1724 196 48 0 chr2 197553922 197554253 -53133601 - MER7A DNA MER2_type -1 345 1 4786 256 82 47 chr2 197554253 197555852 -53132002 - L1MDa LINE L1 -4880 1660 16 2281 74 3 6 chr2 197555874 197556185 -53131669 - L1PA5 LINE L1 0 6154 5845 40273 73 3 2 chr2 197556285 197561941 -53125913 - L1PA5 LINE L1 -482 5672 10 423 327 48 44 chr2 197562917 197563168 -53124686 - MIR SINE MIR -6 256 5 28 29 0 0 chr2 197563212 197563247 -53124607 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 197563349 197563372 -53124482 + AT_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr2 197563776 197563825 -53124029 + AT_rich Low_complexity Low_complexity 1 49 0 244 321 92 0 chr2 197565069 197565178 -53122676 + MIR SINE MIR 144 262 0 21 36 0 0 chr2 197565606 197565634 -53122220 + AT_rich Low_complexity Low_complexity 1 28 0 255 31 0 0 chr2 197566136 197566168 -53121686 + (CA)n Simple_repeat Simple_repeat 2 33 0 31 26 0 0 chr2 197567242 197567280 -53120574 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr2 197567404 197567433 -53120421 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr2 197568105 197568127 -53119727 + (TA)n Simple_repeat Simple_repeat 1 22 0 3339 208 44 16 chr2 197568268 197568998 -53118856 + MER54A LTR ERVL 138 887 -14 503 240 0 0 chr2 197568999 197569099 -53118755 - Tigger5 DNA MER2_type -2 2321 2222 381 269 0 10 chr2 197569088 197569192 -53118662 - Tigger5 DNA MER2_type -2217 106 4 * 1238 340 41 12 chr2 197569292 197569873 -53117981 - HERV16 LTR ERVL -2235 2761 2181 692 357 43 18 chr2 197570085 197570823 -53117031 - HERV16 LTR ERVL -3416 1580 797 380 55 18 0 chr2 197570936 197570991 -53116863 + (TG)n Simple_repeat Simple_repeat 1 56 0 305 269 46 15 chr2 197571120 197571250 -53116604 + Charlie8 DNA MER1_type 74 207 -2210 31 0 0 0 chr2 197571967 197571998 -53115856 + AT_rich Low_complexity Low_complexity 1 31 0 2417 201 62 4 chr2 197572120 197572651 -53115203 - MER68 LTR ERV1 0 562 1 25 0 0 0 chr2 197573399 197573424 -53114430 + AT_rich Low_complexity Low_complexity 1 25 0 28 48 0 0 chr2 197573599 197573641 -53114213 + AT_rich Low_complexity Low_complexity 1 42 0 327 25 0 0 chr2 197574605 197574645 -53113209 + (TG)n Simple_repeat Simple_repeat 2 41 0 26 0 0 0 chr2 197574675 197574701 -53113153 + AT_rich Low_complexity Low_complexity 1 26 0 1397 183 106 28 chr2 197574898 197575258 -53112596 - MLT1B LTR MaLR 0 390 3 21 36 0 0 chr2 197575355 197575383 -53112471 + AT_rich Low_complexity Low_complexity 1 28 0 240 287 204 9 chr2 197575987 197576095 -53111759 - MIR SINE MIR -114 148 20 265 373 118 0 chr2 197576332 197576501 -53111353 - MER91A DNA MER1_type 0 196 8 214 289 0 0 chr2 197577890 197577942 -53109912 + MIR SINE MIR 190 241 -21 250 269 59 59 chr2 197578298 197578417 -53109437 + ERVL LTR ERVL 3435 3553 -2101 242 227 34 68 chr2 197578424 197578512 -53109342 + LTR33 LTR ERVL 429 513 -8 216 122 0 0 chr2 197579277 197579318 -53108536 + (A)n Simple_repeat Simple_repeat 1 41 0 452 362 128 12 chr2 197580328 197580673 -53107181 + ERVL LTR ERVL 1905 2289 -3475 568 128 12 0 chr2 197580855 197580941 -53106913 + AluSg/x SINE Alu 206 292 -17 222 111 0 56 chr2 197581007 197581061 -53106793 + (TA)n Simple_repeat Simple_repeat 1 51 0 2270 102 47 3 chr2 197581065 197581407 -53106447 + L1PB1 LINE L1 5782 6138 -13 313 346 19 0 chr2 197581560 197581664 -53106190 + ERVL LTR ERVL 3382 3487 -2277 1186 270 97 53 chr2 197582026 197582429 -53105425 - L1M4c LINE L1 -5179 1101 717 228 67 0 0 chr2 197582429 197582459 -53105395 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1703 146 0 78 chr2 197582461 197582782 -53105072 - AluSx SINE Alu -16 296 1 1186 270 97 53 chr2 197582782 197583363 -53104491 - L1M4c LINE L1 -5563 717 26 207 314 29 116 chr2 197584041 197584130 -53103724 + MIR SINE MIR 12 82 -180 1992 117 0 0 chr2 197584130 197584421 -53103433 - AluSx SINE Alu 0 311 21 207 314 29 116 chr2 197584421 197584502 -53103352 + MIR SINE MIR 82 168 -94 1783 122 6 57 chr2 197584513 197584775 -53103079 - L1MA3 LINE L1 -1 6304 6063 1889 77 8 0 chr2 197584775 197585022 -53102832 - AluY SINE Alu -62 249 1 1783 122 6 57 chr2 197585022 197585113 -53102741 - L1MA3 LINE L1 -242 6063 5969 25 31 0 0 chr2 197585194 197585226 -53102628 + AT_rich Low_complexity Low_complexity 1 32 0 3477 228 44 20 chr2 197585802 197586547 -53101307 + L1MD2 LINE L1 5377 6149 -210 195 42 0 0 chr2 197586547 197586571 -53101283 + (CA)n Simple_repeat Simple_repeat 1 24 0 3477 228 44 20 chr2 197586571 197586737 -53101117 + L1MD2 LINE L1 6149 6310 -49 1338 237 60 50 chr2 197586811 197587309 -53100545 + MLT1D LTR MaLR 3 505 0 473 230 81 42 chr2 197587449 197587710 -53100144 + L1MC5 LINE L1 7637 7907 -54 27 62 0 0 chr2 197587805 197587853 -53100001 + AT_rich Low_complexity Low_complexity 1 48 0 353 313 68 31 chr2 197588182 197588374 -53099480 - LTR67 LTR ERVL -1 556 358 314 315 63 21 chr2 197589114 197589257 -53098597 - ERVL LTR ERVL -467 5297 5149 1491 282 56 19 chr2 197589260 197589806 -53098048 + MLT1F1 LTR MaLR 3 567 0 534 254 45 31 chr2 197590670 197590894 -53096960 - L1MB8 LINE L1 0 6178 5952 1282 256 48 16 chr2 197590899 197591333 -53096521 - L1MB8 LINE L1 -913 5233 4786 192 163 0 0 chr2 197591518 197591561 -53096293 + (TG)n Simple_repeat Simple_repeat 2 44 0 243 88 0 0 chr2 197592009 197592043 -53095811 + (A)n Simple_repeat Simple_repeat 1 34 0 1534 154 111 40 chr2 197592225 197592494 -53095360 - THE1C LTR MaLR 0 375 74 6725 208 109 17 chr2 197592494 197594102 -53093752 + MER52A LTR ERV1 1 1755 0 1534 154 111 40 chr2 197594102 197594182 -53093672 - THE1C LTR MaLR -301 74 1 476 292 30 12 chr2 197594458 197594626 -53093228 + LTR41 LTR ERVL 10 180 -593 292 225 75 0 chr2 197595086 197595166 -53092688 + LTR50 LTR ERVL 710 795 0 216 0 0 0 chr2 197596681 197596705 -53091149 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1833 114 33 4 chr2 197596708 197596979 -53090875 - AluY SINE Alu -32 279 1 2132 122 3 10 chr2 197597426 197597737 -53090117 - AluSc SINE Alu 0 309 1 4791 226 52 43 chr2 197597858 197600649 -53087205 - L1MC2 LINE L1 -41 6303 3495 21 36 0 0 chr2 197600682 197600710 -53087144 + AT_rich Low_complexity Low_complexity 1 28 0 1037 123 18 6 chr2 197600711 197600881 -53086973 - HSMAR1 DNA Mariner -1 1286 1115 3153 234 12 1 chr2 197650892 197651637 -53036217 - L1P LINE L1 -876 5270 4518 21 57 0 0 chr2 197651867 197651902 -53035952 + AT_rich Low_complexity Low_complexity 1 35 0 340 215 0 35 chr2 197652098 197652242 -53035612 + (TA)n Simple_repeat Simple_repeat 2 140 0 270 264 0 22 chr2 197652243 197652334 -53035520 + L1MC4 LINE L1 6615 6703 -1339 345 260 0 0 chr2 197652334 197652438 -53035416 + (TA)n Simple_repeat Simple_repeat 2 105 0 241 274 0 63 chr2 197652440 197652535 -53035319 + L1MC4 LINE L1 6614 6702 -1340 317 222 17 17 chr2 197652539 197652656 -53035198 + (TA)n Simple_repeat Simple_repeat 2 118 0 1797 189 32 35 chr2 197652830 197653421 -53034433 - L1P4 LINE L1 -710 5455 4876 21 104 0 0 chr2 197654260 197654337 -53033517 + AT_rich Low_complexity Low_complexity 1 77 0 34 0 0 0 chr2 197654656 197654690 -53033164 + AT_rich Low_complexity Low_complexity 1 34 0 24 53 0 0 chr2 197655535 197655573 -53032281 + AT_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr2 197655864 197655898 -53031956 + AT_rich Low_complexity Low_complexity 1 34 0 21 71 0 0 chr2 197656067 197656109 -53031745 + AT_rich Low_complexity Low_complexity 1 42 0 1306 186 56 22 chr2 197656109 197656378 -53031476 - L1PA16 LINE L1 -9 6157 5880 600 90 0 0 chr2 197656378 197656467 -53031387 - L1PA6 LINE L1 0 6154 6066 3246 177 40 10 chr2 197656568 197657287 -53030567 + L1PA16 LINE L1 5425 6165 -1 240 387 82 10 chr2 197657303 197657693 -53030161 - L2 LINE L2 -1257 2057 1640 25 65 0 0 chr2 197657976 197658022 -53029832 + AT_rich Low_complexity Low_complexity 1 46 0 186 103 0 0 chr2 197658181 197658210 -53029644 + (T)n Simple_repeat Simple_repeat 1 29 0 240 254 0 51 chr2 197659233 197659292 -53028562 + MER90 LTR ERV1 5 60 -554 987 161 12 78 chr2 197659292 197659535 -53028319 - AluJb SINE Alu -1 311 85 429 190 25 0 chr2 197659536 197659615 -53028239 + MER90 LTR ERV1 98 178 -436 7018 207 18 53 chr2 197659718 197661585 -53026269 - L1MCa LINE L1 -2233 4193 2393 * 8238 162 22 8 chr2 197661575 197663101 -53024753 - L1PBa LINE L1 -4127 2736 1190 4895 174 50 11 chr2 197663243 197664192 -53023662 + L1PB1 LINE L1 4805 5812 -339 315 71 0 0 chr2 197664192 197664234 -53023620 + (CA)n Simple_repeat Simple_repeat 2 43 0 4895 174 50 11 chr2 197664234 197664585 -53023269 + L1PB1 LINE L1 5812 6148 -3 189 0 0 0 chr2 197664613 197664634 -53023220 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 629 321 76 9 chr2 197665094 197665318 -53022536 - MIR SINE MIR -5 257 19 1685 206 43 11 chr2 197665617 197665966 -53021888 + MLT1A1 LTR MaLR 1 360 -5 1026 156 6 0 chr2 197666577 197666737 -53021117 + AluJb SINE Alu 137 297 -15 10476 119 20 7 chr2 197667045 197668604 -53019250 - THE1A-int LTR MaLR 0 1580 1 2587 68 53 0 chr2 197668604 197668941 -53018913 - THE1A LTR MaLR 0 355 1 252 234 10 137 chr2 197669619 197669824 -53018030 - L1MDb LINE L1 -5457 952 774 228 175 70 0 chr2 197670634 197670691 -53017163 - L1MCa LINE L1 -4496 1930 1870 212 326 81 17 chr2 197671001 197671173 -53016681 + MIR SINE MIR 45 227 -35 564 247 30 60 chr2 197672976 197673142 -53014712 - MIR SINE MIR -95 167 7 514 259 17 0 chr2 197673281 197673397 -53014457 + MER94 DNA DNA 2 119 -15 2455 102 14 8 chr2 197673906 197674259 -53013595 + THE1A LTR MaLR 1 355 0 306 267 76 0 chr2 197674280 197674385 -53013469 - L1MC4 LINE L1 -995 7047 6935 429 294 11 17 chr2 197674398 197674575 -53013279 + L1 LINE L1 4072 4247 -1899 29 60 0 36 chr2 197675260 197675343 -53012511 + AT_rich Low_complexity Low_complexity 1 80 0 229 173 19 0 chr2 197676795 197676847 -53011007 + L1MC4 LINE L1 6650 6702 -1340 * 231 160 173 0 chr2 197676819 197676894 -53010960 - L1MC4 LINE L1 -1340 6702 6615 * 234 247 45 45 chr2 197676877 197676966 -53010888 + L1MC4 LINE L1 6614 6702 -1340 * 265 229 0 62 chr2 197676915 197677011 -53010843 - L1MC4 LINE L1 -1339 6703 6614 263 217 27 21 chr2 197677032 197677142 -53010712 - L1MCa LINE L1 -1340 6982 1995 282 206 0 0 chr2 197677142 197677205 -53010649 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 275 250 0 62 chr2 197677207 197677303 -53010551 + L1MC4 LINE L1 6614 6703 -1339 256 209 45 0 chr2 197677275 197677342 -53010512 + L1MCa LINE L1 1995 2064 -4362 * 234 269 0 43 chr2 197677354 197677447 -53010407 + L1MC4 LINE L1 6615 6703 -1339 233 318 0 0 chr2 197677399 197677487 -53010367 - L1MC4 LINE L1 -1341 6701 6614 * 269 275 0 22 chr2 197677457 197677548 -53010306 + L1MC4 LINE L1 6614 6702 -1340 230 333 0 0 chr2 197677553 197677643 -53010211 - L1MC4 LINE L1 -1339 6703 6614 * 262 296 0 0 chr2 197677569 197677650 -53010204 + L1MC4 LINE L1 6616 6696 -1346 7390 145 41 11 chr2 197677934 197679127 -53008727 - THE1-int LTR MaLR -47 1533 305 183 156 0 0 chr2 197679127 197679159 -53008695 + GA-rich Low_complexity Low_complexity 3 34 0 2466 23 14 0 chr2 197679166 197679530 -53008324 - L1PA4 LINE L1 -601 5554 5187 4938 35 5 0 chr2 197679530 197680130 -53007724 + L1PA4 LINE L1 5548 6152 -3 435 202 0 0 chr2 197680143 197680237 -53007617 + GA-rich Low_complexity Low_complexity 3 96 0 21 57 0 0 chr2 197680949 197680984 -53006870 + AT_rich Low_complexity Low_complexity 1 35 0 2299 234 30 7 chr2 197681439 197682050 -53005804 - L1MB8 LINE L1 -3 6175 5551 259 361 25 0 chr2 197682227 197682346 -53005508 + L1MC4a LINE L1 5473 5594 -2214 313 317 73 15 chr2 197682422 197682627 -53005227 + L1MC4a LINE L1 5670 5886 -1922 5885 196 21 7 chr2 197682670 197684331 -53003523 + L1MC1 LINE L1 4590 6316 -17 243 61 0 0 chr2 197684394 197684427 -53003427 + (CAA)n Simple_repeat Simple_repeat 1 33 0 39 38 0 0 chr2 197684850 197684903 -53002951 + AT_rich Low_complexity Low_complexity 1 53 0 705 268 163 66 chr2 197684928 197685973 -53001881 - L1M4 LINE L1 -2316 3830 2685 361 263 216 11 chr2 197686086 197686276 -53001578 - L1M4 LINE L1 -3701 2445 2217 305 109 22 0 chr2 197686667 197686713 -53001141 + THE1C LTR MaLR 329 375 0 5701 110 9 21 chr2 197686713 197687584 -53000270 + L1PA12 LINE L1 5307 6167 -1 631 254 188 55 chr2 197687603 197687859 -52999995 - MSTD LTR MaLR -106 290 1 24 0 0 0 chr2 197688250 197688274 -52999580 + AT_rich Low_complexity Low_complexity 1 24 0 294 286 86 43 chr2 197688478 197688618 -52999236 + MIR SINE MIR 9 154 -108 988 178 33 61 chr2 197688618 197688832 -52999022 + MER46A DNA MER2_type 1 208 -28 22 0 0 0 chr2 197689694 197689716 -52998138 + AT_rich Low_complexity Low_complexity 1 22 0 25 95 0 0 chr2 197689997 197690071 -52997783 + AT_rich Low_complexity Low_complexity 1 74 0 926 138 43 5 chr2 197692425 197692613 -52995241 - L1MA4 LINE L1 -5 6295 6101 23 33 0 0 chr2 197693836 197693866 -52993988 + AT_rich Low_complexity Low_complexity 1 30 0 884 223 113 9 chr2 197695022 197695519 -52992335 - L1M4 LINE L1 -603 5575 5028 * 1246 211 100 16 chr2 197695496 197695865 -52991989 - L1M4 LINE L1 -1331 4815 4416 348 235 87 32 chr2 197695867 197696010 -52991844 - L1M4 LINE L1 -3863 2283 2134 373 273 25 6 chr2 197696028 197696506 -52991348 + (TA)n Simple_repeat Simple_repeat 1 486 0 333 0 0 0 chr2 197696506 197696543 -52991311 + (TG)n Simple_repeat Simple_repeat 2 38 0 508 229 25 0 chr2 197696638 197696756 -52991098 - L1MB1 LINE L1 -128 6040 5920 233 170 43 0 chr2 197696795 197696842 -52991012 + L1MB1 LINE L1 6108 6156 -12 396 79 13 40 chr2 197696853 197696929 -52990925 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 272 401 57 26 chr2 197697189 197697381 -52990473 - L2 LINE L2 -2 3270 3073 24 0 0 0 chr2 197697847 197697871 -52989983 + AT_rich Low_complexity Low_complexity 1 24 0 240 260 14 14 chr2 197698000 197698073 -52989781 + (TG)n Simple_repeat Simple_repeat 2 74 0 2017 134 10 3 chr2 197698846 197699153 -52988701 + AluSx SINE Alu 1 309 -3 6307 138 23 36 chr2 197699617 197699696 -52988158 - Tigger1 DNA MER2_type -1317 1101 1023 2138 136 0 3 chr2 197699696 197700004 -52987850 + AluSx SINE Alu 1 307 -5 6307 138 23 36 chr2 197700004 197701037 -52986817 - Tigger1 DNA MER2_type -1395 1023 3 2319 149 50 48 chr2 197701041 197701496 -52986358 + Tigger3(Golem) DNA MER2_type 2573 3028 -1 592 276 20 10 chr2 197701698 197702032 -52985822 - AluYa5 SINE Alu 0 338 2 1098 161 14 40 chr2 197702338 197702561 -52985293 + MLT1A2-int LTR MaLR 1508 1724 -11 963 236 55 63 chr2 197702571 197702935 -52984919 + MLT1A2 LTR MaLR 1 361 -13 23 33 0 0 chr2 197703499 197703529 -52984325 + AT_rich Low_complexity Low_complexity 1 30 0 556 62 0 12 chr2 197704114 197704194 -52983660 + MADE1 DNA Mariner 1 79 -1 255 322 11 0 chr2 197706447 197706534 -52981320 - L1ME LINE L1 -539 5582 5495 261 42 139 14 chr2 197706735 197706807 -52981047 + (TTAA)n Simple_repeat Simple_repeat 1 81 0 1988 125 0 0 chr2 197707322 197707602 -52980252 + AluSx SINE Alu 33 312 0 13672 151 19 18 chr2 197708049 197710447 -52977407 + Tigger1 DNA MER2_type 1 2399 -19 234 221 11 66 chr2 197710556 197710737 -52977117 + (GGGTG)n Simple_repeat Simple_repeat 1 171 0 2329 179 47 2 chr2 197710897 197711345 -52976509 - L1PBa LINE L1 -6395 468 1 226 217 133 12 chr2 197711872 197711955 -52975899 - L1M4 LINE L1 -392 6180 6088 266 293 12 0 chr2 197712064 197712146 -52975708 - L1MC5 LINE L1 -722 7239 7157 236 212 110 20 chr2 197712440 197712586 -52975268 - L1M4 LINE L1 -953 5587 5429 1579 227 21 0 chr2 197712892 197713218 -52974636 - MER2 DNA MER2_type 0 345 13 2056 147 38 16 chr2 197713221 197713588 -52974266 + THE1C LTR MaLR 1 375 0 445 239 17 0 chr2 197713625 197713742 -52974112 - L1M4 LINE L1 -3646 2894 2776 2383 74 0 0 chr2 197713822 197714133 -52973721 - L1PA5 LINE L1 -3 6151 5841 317 299 94 16 chr2 197714133 197714253 -52973601 - L1M4 LINE L1 -4070 2651 2519 2282 112 0 0 chr2 197714373 197714669 -52973185 - AluSc SINE Alu -13 296 1 22 0 0 0 chr2 197714895 197714917 -52972937 + AT_rich Low_complexity Low_complexity 1 22 0 369 264 0 9 chr2 197715078 197715184 -52972670 - HAL1 LINE L1 -920 1587 1483 1606 142 20 0 chr2 197715219 197715466 -52972388 + AluSx SINE Alu 24 275 -37 844 139 8 0 chr2 197715466 197715612 -52972242 + AluSg/x SINE Alu 160 306 0 447 292 102 66 chr2 197715645 197715977 -52971877 - L1MEd LINE L1 -4871 1659 1307 3679 129 103 28 chr2 197715999 197717091 -52970763 + MER11A LTR ERVK 1 1236 0 235 140 35 18 chr2 197717091 197717148 -52970706 + T-rich Low_complexity Low_complexity 5 62 0 829 268 95 22 chr2 197717823 197718193 -52969661 - L1MB8 LINE L1 -2 6176 5780 1650 133 7 4 chr2 197718193 197718463 -52969391 - pTR5 LTR ERV1 -2052 386 116 361 292 105 24 chr2 197719648 197719857 -52967997 + LTR33A LTR ERVL 269 494 -29 21 0 0 0 chr2 197721100 197721121 -52966733 + AT_rich Low_complexity Low_complexity 1 21 0 198 91 0 0 chr2 197721523 197721556 -52966298 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 425 238 8 0 chr2 197721900 197722022 -52965832 + GA-rich Low_complexity Low_complexity 1 123 0 300 53 0 0 chr2 197723320 197723358 -52964496 + (TA)n Simple_repeat Simple_repeat 2 39 0 2177 104 7 0 chr2 197723358 197723645 -52964209 - AluSg SINE Alu -21 289 1 246 155 14 42 chr2 197723669 197723740 -52964114 + (TATATG)n Simple_repeat Simple_repeat 4 72 0 6122 161 43 10 chr2 197724458 197725653 -52962201 - L1PBa LINE L1 -4363 2500 1266 733 267 38 26 chr2 197725670 197725936 -52961918 - L1PBa LINE L1 -6589 274 6 28 29 0 0 chr2 197726016 197726051 -52961803 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 197726113 197726142 -52961712 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr2 197726739 197726766 -52961088 + AT_rich Low_complexity Low_complexity 1 27 0 21 82 0 0 chr2 197729240 197729289 -52958565 + AT_rich Low_complexity Low_complexity 1 49 0 951 184 28 170 chr2 197730520 197730956 -52956898 + MLT1A2 LTR MaLR 1 374 0 21 57 0 0 chr2 197732401 197732436 -52955418 + AT_rich Low_complexity Low_complexity 1 35 0 205 49 0 49 chr2 197732922 197732963 -52954891 + (TA)n Simple_repeat Simple_repeat 1 39 0 477 152 25 0 chr2 197733100 197733179 -52954675 - Charlie5 DNA MER1_type -2513 99 19 2069 117 0 13 chr2 197733784 197734113 -52953741 + AluSx SINE Alu 4 312 0 244 322 91 58 chr2 197735117 197735359 -52952495 + L1MC/D LINE L1 5491 5740 -2068 392 81 0 16 chr2 197735630 197735692 -52952162 + (TA)n Simple_repeat Simple_repeat 1 61 0 2500 48 0 3 chr2 197735823 197736132 -52951722 + AluY SINE Alu 1 308 -3 12153 59 6 13 chr2 197736175 197737831 -52950023 + L1P LINE L1 1 1644 -4502 256 343 51 36 chr2 197738086 197738223 -52949631 - MER5B DNA MER1_type -22 156 18 28 0 0 0 chr2 197739311 197739339 -52948515 + AT_rich Low_complexity Low_complexity 1 28 0 375 313 86 0 chr2 197739376 197739504 -52948350 - MIR SINE MIR -56 206 68 2406 46 13 0 chr2 197740605 197740912 -52946942 + AluYa5 SINE Alu 1 311 0 342 336 8 8 chr2 197741059 197741190 -52946664 - MER2 DNA MER2_type -19 326 196 380 0 0 0 chr2 197741190 197741233 -52946621 - L1P2 LINE L1 -351 5804 5762 377 21 0 0 chr2 197741233 197741279 -52946575 + L1PA4 LINE L1 6108 6155 0 780 258 35 0 chr2 197741365 197741563 -52946291 - MER2 DNA MER2_type -139 206 2 360 315 77 23 chr2 197741798 197742058 -52945796 - L1ME3A LINE L1 -223 5947 5674 328 324 86 8 chr2 197742587 197742843 -52945011 + L1MEc LINE L1 1385 1660 -4736 502 154 2 16 chr2 197743012 197743118 -52944736 - L1MD1 LINE L1 -19 6223 6142 1010 175 48 0 chr2 197743131 197743320 -52944534 - MER2 DNA MER2_type -139 206 9 2209 202 53 52 chr2 197743334 197743972 -52943882 - L1MD1 LINE L1 -335 5907 5269 1199 232 128 26 chr2 197744051 197744582 -52943272 + L1M4 LINE L1 4631 5215 -931 370 109 0 16 chr2 197744752 197744816 -52943038 + L1MA9 LINE L1 6115 6177 -135 237 313 89 0 chr2 197744816 197745030 -52942824 + L1MEc LINE L1 2200 2432 -3783 7013 115 130 97 chr2 197745275 197746916 -52940938 - pTR5 LTR ERV1 0 2438 743 986 134 27 5 chr2 197746916 197747103 -52940751 + L1MA9 LINE L1 6102 6292 -20 1688 129 15 4 chr2 197747117 197747380 -52940474 - THE1A LTR MaLR 0 355 90 23 54 0 0 chr2 197748129 197748166 -52939688 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr2 197748802 197748834 -52939020 + AT_rich Low_complexity Low_complexity 1 32 0 204 337 22 11 chr2 197749416 197749505 -52938349 + MIR SINE MIR 117 206 -56 21 36 0 0 chr2 197749920 197749948 -52937906 + AT_rich Low_complexity Low_complexity 1 28 0 263 285 140 100 chr2 197750063 197750228 -52937626 - MIR SINE MIR -38 224 48 1920 153 7 0 chr2 197750228 197750522 -52937332 + AluSp SINE Alu 1 296 -17 263 285 140 100 chr2 197750522 197750556 -52937298 - MIR SINE MIR -214 48 17 1838 271 45 42 chr2 197751871 197751994 -52935860 + L1M3e LINE L1 573 694 -6871 2031 143 39 36 chr2 197751994 197752357 -52935497 - THE1B LTR MaLR 0 364 1 1838 271 45 42 chr2 197752357 197753593 -52934261 + L1M3e LINE L1 694 2773 -4792 * 10437 41 1 0 chr2 197753580 197754887 -52932967 - L1P LINE L1 -2080 4066 2759 3996 34 0 0 chr2 197754888 197755362 -52932492 + L1PA5 LINE L1 5670 6143 -11 599 243 27 0 chr2 197755384 197755532 -52932322 + L1M3e LINE L1 2735 2886 -4679 533 246 15 10 chr2 197755557 197755760 -52932094 + L1M3e LINE L1 3038 3241 -4324 2186 183 26 28 chr2 197755782 197756280 -52931574 + L1PA13 LINE L1 4864 5360 -786 5077 111 19 5 chr2 197756426 197757209 -52930645 + L1PA13 LINE L1 5365 6158 -5 21 0 0 0 chr2 197757328 197757349 -52930505 + AT_rich Low_complexity Low_complexity 1 21 0 673 211 0 35 chr2 197757435 197757577 -52930277 - FLAM_C SINE Alu -6 137 1 2437 120 0 11 chr2 197757866 197758234 -52929620 + THE1B LTR MaLR 1 364 0 26 74 0 0 chr2 197760202 197760256 -52927598 + AT_rich Low_complexity Low_complexity 1 54 0 25 0 0 0 chr2 197760335 197760360 -52927494 + AT_rich Low_complexity Low_complexity 1 25 0 22 94 0 0 chr2 197760441 197760505 -52927349 + AT_rich Low_complexity Low_complexity 1 64 0 205 250 21 42 chr2 197760646 197760790 -52927064 + (TATAA)n Simple_repeat Simple_repeat 5 145 0 207 300 0 0 chr2 197760800 197760890 -52926964 + (TA)n Simple_repeat Simple_repeat 1 90 0 337 222 41 99 chr2 197761088 197761259 -52926595 + L1ME LINE L1 5625 5785 -377 21 0 0 0 chr2 197761561 197761582 -52926272 + AT_rich Low_complexity Low_complexity 1 21 0 34 42 0 0 chr2 197761629 197761677 -52926177 + AT_rich Low_complexity Low_complexity 1 48 0 23 68 0 0 chr2 197761707 197761751 -52926103 + AT_rich Low_complexity Low_complexity 1 44 0 37 39 0 0 chr2 197761790 197761841 -52926013 + AT_rich Low_complexity Low_complexity 1 51 0 329 323 58 0 chr2 197762097 197762252 -52925602 + L1M4b LINE L1 69 232 -6627 1289 243 41 44 chr2 197762378 197762991 -52924863 + L1M4 LINE L1 4877 5500 -678 884 240 66 50 chr2 197762993 197763459 -52924395 + MLT1B LTR MaLR 1 467 0 579 266 71 0 chr2 197763485 197763731 -52924123 + L1M4 LINE L1 5513 5791 -380 5657 107 77 18 chr2 197763731 197765038 -52922816 + pTR5 LTR ERV1 742 2243 -195 642 150 46 13 chr2 197766228 197766381 -52921473 + L1MA8 LINE L1 6130 6287 -4 1026 226 114 57 chr2 197766596 197767034 -52920820 + MLT1C LTR MaLR 5 467 0 783 286 28 24 chr2 197767089 197767272 -52920582 - Charlie2b DNA MER1_type -2111 671 485 1996 134 39 55 chr2 197767272 197767653 -52920201 + THE1C LTR MaLR 1 375 0 783 286 28 24 chr2 197767653 197767756 -52920098 - Charlie2b DNA MER1_type -2297 485 384 1131 136 30 5 chr2 197767788 197767986 -52919868 - L1PA14 LINE L1 -1 6160 5958 326 198 21 0 chr2 197768054 197768150 -52919704 + (TATG)n Simple_repeat Simple_repeat 3 100 0 350 256 24 40 chr2 197768192 197768317 -52919537 - Charlie2b DNA MER1_type -2651 131 9 562 155 0 0 chr2 197768340 197768424 -52919430 - Tigger7 DNA MER2_type -1 2586 2503 2811 193 6 8 chr2 197768430 197768947 -52918907 - Tigger7 DNA MER2_type -217 516 1 379 295 108 26 chr2 197768972 197769277 -52918577 + L1M4 LINE L1 3976 4305 -1841 22 0 0 0 chr2 197769277 197769299 -52918555 + AT_rich Low_complexity Low_complexity 1 22 0 319 346 78 22 chr2 197769432 197769663 -52918191 + L1M4 LINE L1 4524 4767 -1379 183 80 0 0 chr2 197769861 197769886 -52917968 + (TG)n Simple_repeat Simple_repeat 2 26 0 607 232 62 15 chr2 197770938 197771110 -52916744 - L1MDb LINE L1 -6250 293 35 826 270 61 34 chr2 197771116 197771560 -52916294 - L1MEc LINE L1 -4931 1465 1010 1863 195 30 47 chr2 197771934 197772364 -52915490 - MSTB1 LTR MaLR -1 431 9 1272 140 45 9 chr2 197772365 197772587 -52915267 + MER30 DNA MER1_type 1 230 0 2188 141 34 6 chr2 197772908 197773262 -52914592 - THE1B LTR MaLR 0 364 1 24 77 0 0 chr2 197773330 197773382 -52914472 + AT_rich Low_complexity Low_complexity 1 52 0 382 176 182 34 chr2 197774156 197774332 -52913522 + MER5C DNA MER1_type 117 318 -6 1959 164 50 63 chr2 197774810 197775273 -52912581 - MSTB2 LTR MaLR 0 457 1 1881 171 19 19 chr2 197775738 197776101 -52911753 + THE1B LTR MaLR 1 363 -1 538 263 86 40 chr2 197776306 197776481 -52911373 - MIR SINE MIR -44 218 36 23 33 0 0 chr2 197777544 197777574 -52910280 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 197777978 197778000 -52909854 + AT_rich Low_complexity Low_complexity 1 22 0 748 257 140 7 chr2 197778660 197778952 -52908902 + L1MDb LINE L1 64 394 -6015 11203 92 16 0 chr2 197778977 197781325 -52906529 + L1PA7 LINE L1 3776 6143 -11 398 261 46 7 chr2 197781473 197781626 -52906228 + L1M4 LINE L1 4366 4524 -1622 325 242 10 30 chr2 197781631 197781730 -52906124 - L1M4 LINE L1 -1446 4700 4604 850 276 30 30 chr2 197781740 197782138 -52905716 + L1M4 LINE L1 4528 4925 -1221 * 3221 280 75 21 chr2 197782120 197782378 -52905476 + L1M4 LINE L1 2351 2594 -3552 2414 164 35 13 chr2 197782378 197782829 -52905025 + LOR1b LTR ERV1 1 461 0 3221 280 75 21 chr2 197782829 197784265 -52903589 + L1M4 LINE L1 2594 4136 -2010 205 356 35 43 chr2 197784323 197784438 -52903416 + L2 LINE L2 3199 3312 -1 264 30 0 0 chr2 197784449 197784482 -52903372 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 24 32 0 0 chr2 197784665 197784696 -52903158 + AT_rich Low_complexity Low_complexity 1 31 0 22 88 0 0 chr2 197784753 197784810 -52903044 + AT_rich Low_complexity Low_complexity 1 57 0 27 0 0 0 chr2 197785065 197785092 -52902762 + AT_rich Low_complexity Low_complexity 1 27 0 22 70 0 0 chr2 197786281 197786324 -52901530 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr2 197787884 197787912 -52899942 + AT_rich Low_complexity Low_complexity 1 28 0 744 271 83 45 chr2 197788106 197788442 -52899412 - MLT1H1 LTR MaLR 0 555 207 291 280 13 0 chr2 197788513 197788588 -52899266 - MLT1H1 LTR MaLR -479 76 1 1053 260 79 23 chr2 197788649 197789003 -52898851 + MLT1A2 LTR MaLR 1 374 0 24 0 0 0 chr2 197789782 197789806 -52898048 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 197790260 197790288 -52897566 + AT_rich Low_complexity Low_complexity 1 28 0 1998 136 3 3 chr2 197790749 197791036 -52896818 + AluSx SINE Alu 17 303 -9 194 337 119 17 chr2 197792326 197792581 -52895273 + L2 LINE L2 2733 3016 -256 233 348 76 0 chr2 197792813 197792931 -52894923 + L2 LINE L2 3146 3272 0 251 276 103 87 chr2 197793525 197793710 -52894144 + MER3 DNA MER1_type 22 209 0 * 656 270 27 22 chr2 197793549 197793734 -52894120 - MER3 DNA MER1_type 0 209 24 25 31 0 0 chr2 197794289 197794321 -52893533 + AT_rich Low_complexity Low_complexity 1 32 0 1520 229 16 16 chr2 197794803 197795166 -52892688 + MLT1A1 LTR MaLR 3 365 0 318 278 21 0 chr2 197795267 197795364 -52892490 + GA-rich Low_complexity Low_complexity 1 99 0 183 220 0 0 chr2 197795472 197795522 -52892332 + A-rich Low_complexity Low_complexity 4 53 0 21 36 0 0 chr2 197796762 197796790 -52891064 + AT_rich Low_complexity Low_complexity 1 28 0 1634 228 51 17 chr2 197797281 197798083 -52889771 + L1MB8 LINE L1 4838 5672 -512 376 143 26 26 chr2 197798103 197798180 -52889674 - L1M4 LINE L1 -460 5718 5642 189 74 0 0 chr2 197798180 197798207 -52889647 + (TA)n Simple_repeat Simple_repeat 2 28 0 1578 218 34 46 chr2 197798208 197798712 -52889142 + L1MB8 LINE L1 5678 6175 -3 356 282 69 0 chr2 197798800 197798931 -52888923 + L1M4 LINE L1 3136 3275 -2871 233 180 120 0 chr2 197799081 197799131 -52888723 + MER34C LTR ERV1 43 98 -487 30 0 0 0 chr2 197799548 197799578 -52888276 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 197800103 197800131 -52887723 + AT_rich Low_complexity Low_complexity 1 28 0 198 209 0 0 chr2 197800478 197800521 -52887333 + CT-rich Low_complexity Low_complexity 1 43 0 589 326 56 21 chr2 197801445 197801678 -52886176 - MIR SINE MIR -4 258 18 30 27 0 0 chr2 197802324 197802361 -52885493 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr2 197802891 197802913 -52884941 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 197803440 197803461 -52884393 + AT_rich Low_complexity Low_complexity 1 21 0 1250 128 0 5 chr2 197803508 197803695 -52884159 - AluSq SINE Alu -127 186 1 35 54 0 0 chr2 197804157 197804213 -52883641 + AT_rich Low_complexity Low_complexity 1 56 0 216 151 38 0 chr2 197804213 197804266 -52883588 + A-rich Low_complexity Low_complexity 1 55 0 24 32 0 0 chr2 197804561 197804592 -52883262 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 197805796 197805817 -52882037 + AT_rich Low_complexity Low_complexity 1 21 0 248 332 70 21 chr2 197805938 197806125 -52881729 - L2 LINE L2 0 3313 3118 21 36 0 0 chr2 197806373 197806401 -52881453 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr2 197806460 197806499 -52881355 + AT_rich Low_complexity Low_complexity 1 39 0 249 207 147 7 chr2 197808244 197808394 -52879460 - L1M4 LINE L1 -2914 3730 3560 279 99 0 127 chr2 197808464 197808535 -52879319 - L1PA11 LINE L1 0 6174 6113 3901 83 11 16 chr2 197808466 197809019 -52878835 - L1PA11 LINE L1 -2 6172 5623 472 269 13 7 chr2 197809021 197809170 -52878684 - L1M4 LINE L1 -3337 3307 3158 403 258 71 3 chr2 197809295 197809436 -52878418 - L1MB5 LINE L1 -1 6177 6032 876 179 195 0 chr2 197809513 197809708 -52878146 - L1PA16 LINE L1 -9 6157 5925 26 0 0 0 chr2 197809804 197809830 -52878024 + AT_rich Low_complexity Low_complexity 1 26 0 297 0 0 0 chr2 197809975 197810008 -52877846 + (GA)n Simple_repeat Simple_repeat 2 34 0 284 340 0 0 chr2 197810218 197810312 -52877542 - L1M4 LINE L1 -6441 101 8 375 282 42 70 chr2 197810324 197810636 -52877218 - L1M4 LINE L1 -3657 2489 2187 323 297 23 8 chr2 197810647 197810775 -52877079 + L1M4 LINE L1 4477 4606 -1540 613 254 107 24 chr2 197861494 197861663 -52826191 + MIR SINE MIR 25 207 -55 21 0 0 0 chr2 197861748 197861769 -52826085 + AT_rich Low_complexity Low_complexity 1 21 0 2358 239 14 21 chr2 197861778 197862410 -52825444 - L1P LINE L1 -2456 3690 3063 746 176 77 41 chr2 197862400 197862621 -52825233 + L1P4 LINE L1 5465 5693 -473 * 8686 87 5 14 chr2 197862807 197864075 -52823779 + HERVH LTR ERV1 1740 2995 -4718 5905 88 6 8 chr2 197864054 197864910 -52822944 + HERVH LTR ERV1 3140 3993 -3720 * 4272 154 1 5 chr2 197864901 197865575 -52822279 + HERVH LTR ERV1 4478 5149 -2564 * 1376 134 19 0 chr2 197865576 197865792 -52822062 + HERVH LTR ERV1 5600 5819 -1894 * 2130 123 62 13 chr2 197865790 197866164 -52821690 + HERVH LTR ERV1 7322 7713 0 2691 80 92 5 chr2 197866164 197866576 -52821278 + LTR7 LTR ERV1 1 448 -2 400 219 32 0 chr2 197866579 197866696 -52821158 - L1ME1 LINE L1 -263 5903 5778 946 195 73 5 chr2 197866696 197866901 -52820953 - MER2 DNA MER2_type -3 342 124 4138 128 39 96 chr2 197867194 197868184 -52819670 + pTR5 LTR ERV1 743 1676 -762 4358 259 63 30 chr2 197868189 197869644 -52818210 - L1M4c LINE L1 -1579 5378 3632 2249 83 0 3 chr2 197869644 197869944 -52817910 + AluY SINE Alu 5 303 -8 4358 259 63 30 chr2 197869944 197870511 -52817343 - L1M4c LINE L1 -3325 3632 3085 431 311 58 14 chr2 197870529 197870892 -52816962 - L1M4c LINE L1 -3935 3024 2646 357 178 51 7 chr2 197870932 197871211 -52816643 + (TA)n Simple_repeat Simple_repeat 1 291 0 258 271 0 24 chr2 197871267 197871352 -52816502 - L1MC4 LINE L1 -1345 6697 6615 1931 298 50 37 chr2 197871371 197872072 -52815782 - L1M4c LINE L1 -5999 860 151 4056 118 26 26 chr2 197872209 197873184 -52814670 - HERVH LTR ERV1 -6645 1068 1 2625 83 98 5 chr2 197873186 197873596 -52814258 - LTR7 LTR ERV1 -2 448 1 508 245 69 27 chr2 197873628 197873816 -52814038 + L1ME2 LINE L1 5935 6130 -34 26 30 0 0 chr2 197873929 197873962 -52813892 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr2 197875324 197875347 -52812507 + AT_rich Low_complexity Low_complexity 1 23 0 1042 246 86 24 chr2 197875530 197875904 -52811950 - MER110A LTR ERV1 -71 397 1 473 365 76 0 chr2 197876319 197876516 -52811338 - MLT1I LTR MaLR -93 316 105 25 0 0 0 chr2 197877441 197877466 -52810388 + AT_rich Low_complexity Low_complexity 1 25 0 30 69 0 0 chr2 197877548 197877606 -52810248 + AT_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr2 197877997 197878018 -52809836 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr2 197878352 197878385 -52809469 + (TG)n Simple_repeat Simple_repeat 2 34 0 2948 164 17 48 chr2 197879614 197880253 -52807601 - L1MC1 LINE L1 -393 5940 5322 22 35 0 0 chr2 197881129 197881158 -52806696 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 197881173 197881202 -52806652 + AT_rich Low_complexity Low_complexity 1 29 0 2537 167 75 40 chr2 197881358 197881933 -52805921 + LTR49 LTR ERV1 1 595 0 819 172 52 6 chr2 197881977 197882151 -52805703 - Tigger1 DNA MER2_type -1 2417 2236 4548 240 40 16 chr2 197882163 197883772 -52804082 - L1PA13 LINE L1 -4040 2757 1095 2030 292 104 34 chr2 197883792 197884522 -52803332 - L1PA13 LINE L1 -5990 797 17 4466 160 50 5 chr2 197884522 197885310 -52802544 - Tigger1 DNA MER2_type -1398 1020 198 740 201 38 31 chr2 197885307 197885532 -52802322 - MER61D LTR ERV1 -14 749 338 * 293 138 0 17 chr2 197886142 197886200 -52801654 + (TA)n Simple_repeat Simple_repeat 1 57 0 1586 214 96 47 chr2 197886325 197886815 -52801039 + MER67D LTR ERV1 1 514 0 22 0 0 0 chr2 197887826 197887848 -52800006 + AT_rich Low_complexity Low_complexity 1 22 0 438 265 193 27 chr2 197888464 197888687 -52799167 + MIR SINE MIR 3 262 0 2169 96 38 0 chr2 197889130 197889422 -52798432 + AluSx SINE Alu 1 303 -9 29 28 0 0 chr2 197890604 197890640 -52797214 + AT_rich Low_complexity Low_complexity 1 36 0 275 321 92 0 chr2 197890923 197891032 -52796822 + L2 LINE L2 3154 3272 0 1265 54 6 12 chr2 197891302 197891469 -52796385 + L1PA7 LINE L1 5987 6152 -2 271 56 0 0 chr2 197891568 197891610 -52796244 + L1MEd LINE L1 1564 1612 -4918 1910 115 42 14 chr2 197891771 197892059 -52795795 - AluSg SINE Alu -14 296 1 373 305 71 7 chr2 197893401 197893462 -52794392 - L1M4b LINE L1 -6700 159 103 333 0 0 0 chr2 197893462 197893499 -52794355 + (TG)n Simple_repeat Simple_repeat 1 37 0 258 32 0 0 chr2 197893501 197893532 -52794322 + (GA)n Simple_repeat Simple_repeat 2 32 0 373 305 71 7 chr2 197893532 197893608 -52794246 - L1M4b LINE L1 -6756 103 10 1306 50 0 0 chr2 197893796 197893956 -52793898 + AluY SINE Alu 135 294 -17 27 29 0 0 chr2 197894638 197894672 -52793182 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr2 197894795 197894818 -52793036 + AT_rich Low_complexity Low_complexity 1 23 0 183 80 0 0 chr2 197897138 197897163 -52790691 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 6441 22 18 1 chr2 197897163 197897929 -52789925 - L1PA4 LINE L1 -12 6143 5365 28 71 0 0 chr2 197898224 197898280 -52789574 + AT_rich Low_complexity Low_complexity 1 56 0 5197 170 36 26 chr2 197898400 197899731 -52788123 - L1MA4 LINE L1 -20 6982 5634 262 340 0 0 chr2 197900413 197900519 -52787335 + (TGG)n Simple_repeat Simple_repeat 3 108 0 198 0 0 0 chr2 197901047 197901069 -52786785 + (T)n Simple_repeat Simple_repeat 1 22 0 4813 231 31 58 chr2 197901463 197903551 -52784303 - L1MA4 LINE L1 -2300 4548 2530 1963 131 7 10 chr2 197903551 197903848 -52784006 + AluSx SINE Alu 1 296 -16 4813 231 31 58 chr2 197903848 197903948 -52783906 - L1MA4 LINE L1 -4318 2530 2429 186 43 0 0 chr2 197903948 197903971 -52783883 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 739 239 18 6 chr2 197904093 197904256 -52783598 - Tigger1 DNA MER2_type -2252 166 2 1220 241 31 29 chr2 197904861 197905326 -52782528 - L1 LINE L1 -3579 3629 2964 839 207 0 24 chr2 197905326 197905490 -52782364 - FRAM SINE Alu -6 160 1 1220 241 31 29 chr2 197905490 197905544 -52782310 - L1 LINE L1 -4244 2964 2912 268 276 117 25 chr2 197905557 197905720 -52782134 - L1 LINE L1 -5679 1530 1353 1910 130 7 0 chr2 197907901 197908178 -52779676 + AluSx SINE Alu 1 279 -33 210 197 40 40 chr2 197908513 197908589 -52779265 + (TTTAA)n Simple_repeat Simple_repeat 5 80 0 210 312 14 21 chr2 197909058 197909199 -52778655 + (TA)n Simple_repeat Simple_repeat 2 141 0 316 315 84 29 chr2 197909224 197909462 -52778392 - L1MC4a LINE L1 -1879 5929 5679 238 270 140 10 chr2 197909573 197909673 -52778181 + HAL1 LINE L1 586 698 -1809 1641 304 53 58 chr2 197910365 197911581 -52776273 - HERVI LTR ERV1 -138 7647 6438 292 317 8 8 chr2 197911990 197912110 -52775744 - HERVI LTR ERV1 -1792 4857 4738 2306 341 30 26 chr2 197912332 197913959 -52773895 - HERVI LTR ERV1 -2029 5756 4124 2337 314 54 45 chr2 197913999 197916744 -52771110 - HERVI LTR ERV1 -3674 4111 969 449 327 12 0 chr2 197916948 197917110 -52770744 - HERVI LTR ERV1 -6837 948 785 332 311 68 47 chr2 197918153 197918343 -52769511 + HAL1 LINE L1 760 953 -1554 237 261 31 0 chr2 197918343 197918408 -52769446 + GA-rich Low_complexity Low_complexity 1 67 0 680 289 115 44 chr2 197918427 197919219 -52768635 + HAL1 LINE L1 884 1731 -776 1599 272 109 16 chr2 197920559 197921299 -52766555 + MER97a DNA MER1_type? 86 894 0 247 96 39 0 chr2 197921305 197921357 -52766497 + (CA)n Simple_repeat Simple_repeat 2 55 0 426 183 139 0 chr2 197921645 197921760 -52766094 + L1MA6 LINE L1 6086 6216 -84 22 0 0 0 chr2 197921966 197921988 -52765866 + GC_rich Low_complexity Low_complexity 1 22 0 297 0 0 0 chr2 197921993 197922026 -52765828 + (T)n Simple_repeat Simple_repeat 1 33 0 1108 48 0 0 chr2 197922026 197922152 -52765702 - AluY SINE Alu -179 132 7 264 122 0 0 chr2 197922443 197922484 -52765370 + (TA)n Simple_repeat Simple_repeat 2 42 0 254 237 0 32 chr2 197922485 197922578 -52765276 - L1MC4 LINE L1 -1339 6703 6614 * 287 218 35 0 chr2 197922503 197922590 -52765264 + L1MC4 LINE L1 6614 6703 -1339 2238 245 90 19 chr2 197923221 197924044 -52763810 - L1ME1 LINE L1 -5 6161 5281 1690 239 62 20 chr2 197924151 197924704 -52763150 - L1ME1 LINE L1 -1966 4180 3605 5317 218 38 78 chr2 197924726 197925291 -52762563 + L1MC3 LINE L1 6081 6667 -1118 226 236 0 0 chr2 197925291 197925346 -52762508 + LTR66 LTR ERVL 394 448 -162 5317 218 38 78 chr2 197925346 197926459 -52761395 + L1MC3 LINE L1 6667 7743 -42 24 53 0 0 chr2 197926778 197926816 -52761038 + AT_rich Low_complexity Low_complexity 1 38 0 1578 184 68 41 chr2 197927219 197927584 -52760270 - MLT1B LTR MaLR 0 390 16 26 64 0 0 chr2 197927600 197927647 -52760207 + AT_rich Low_complexity Low_complexity 1 47 0 1431 259 97 39 chr2 197928042 197928813 -52759041 - MER69 DNA AcHobo -245 2281 1466 4630 150 10 32 chr2 197929526 197930345 -52757509 - Tigger1 DNA MER2_type -25 2393 1593 344 264 198 0 chr2 197930377 197930498 -52757356 - L2 LINE L2 -492 2822 2678 258 257 9 34 chr2 197930504 197930665 -52757189 + L1MEc LINE L1 1360 1409 -5450 380 269 15 31 chr2 197930666 197930796 -52757058 + L1ME1 LINE L1 5569 5699 -485 2165 235 62 109 chr2 197930851 197931697 -52756157 - MER21B LTR ERV1 -55 808 3 598 318 85 6 chr2 197931721 197932086 -52755768 + L1ME1 LINE L1 5764 6157 -9 1669 132 71 71 chr2 197932617 197932981 -52754873 - THE1C LTR MaLR -11 364 1 38 22 0 0 chr2 197932987 197933032 -52754822 + AT_rich Low_complexity Low_complexity 1 45 0 367 326 29 21 chr2 197933126 197933365 -52754489 + L1ME3A LINE L1 5090 5330 -816 246 304 106 33 chr2 197933577 197933869 -52753985 + L1ME3A LINE L1 5625 5937 -233 36 62 0 0 chr2 197934071 197934135 -52753719 + AT_rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr2 197934393 197934414 -52753440 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 197934440 197934470 -52753384 + AT_rich Low_complexity Low_complexity 1 30 0 235 268 0 0 chr2 197934659 197934715 -52753139 - MLT1E LTR MaLR -506 87 32 520 272 143 34 chr2 197934810 197934858 -52752996 + L1ME LINE L1 3448 3489 -2657 1247 203 19 55 chr2 197934858 197935169 -52752685 + AluJo SINE Alu 4 303 -9 520 272 143 34 chr2 197935169 197935414 -52752440 + L1ME LINE L1 3489 3773 -2373 1257 184 82 12 chr2 197935453 197935870 -52751984 - LTR48 LTR ERV1 -40 747 142 2039 240 22 24 chr2 197935993 197936542 -52751312 + L1MC3 LINE L1 7024 7571 -214 2225 269 41 23 chr2 197936562 197937224 -52750630 + L1M3f LINE L1 14 687 -4641 4839 232 49 16 chr2 197937229 197938046 -52749808 + L1M3f LINE L1 860 1750 -4578 245 51 26 0 chr2 197938046 197938085 -52749769 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 4839 232 49 16 chr2 197938085 197938757 -52749097 + L1M3f LINE L1 1750 2398 -3930 12206 215 36 21 chr2 197938796 197938928 -52748926 + L1M3f LINE L1 2407 2536 -3792 2080 105 0 49 chr2 197938928 197939253 -52748601 + AluSc SINE Alu 1 309 0 12206 215 36 21 chr2 197939253 197939377 -52748477 + L1M3f LINE L1 2536 2657 -3671 201 74 0 0 chr2 197939377 197939404 -52748450 + (CATA)n Simple_repeat Simple_repeat 2 28 0 12206 215 36 21 chr2 197939404 197941091 -52746763 + L1M3f LINE L1 2657 4318 -2010 1400 74 5 0 chr2 197941091 197941281 -52746573 - L1PA13 LINE L1 0 6163 5973 12206 215 36 21 chr2 197941281 197941805 -52746049 + L1M3f LINE L1 4318 4833 -1495 1395 197 153 29 chr2 197941805 197942191 -52745663 + Tigger2a DNA MER2_type 1 434 0 12206 215 36 21 chr2 197942191 197942833 -52745021 + L1M3f LINE L1 4833 5564 -764 555 294 72 19 chr2 197942860 197943133 -52744721 + L1ME LINE L1 4823 5123 -1023 1599 233 122 0 chr2 197943133 197943583 -52744271 + MLT1D LTR MaLR 1 505 0 555 294 72 19 chr2 197943583 197943686 -52744168 + L1ME LINE L1 5123 5219 -927 447 222 46 33 chr2 197943762 197943915 -52743939 + L1ME3 LINE L1 5803 5957 -205 693 228 123 49 chr2 197943961 197944246 -52743608 + L1ME LINE L1 5259 5564 -600 3108 199 211 28 chr2 197944246 197945056 -52742798 - MER52A LTR ERV1 -797 958 1 192 152 0 0 chr2 197946516 197946549 -52741305 + (TA)n Simple_repeat Simple_repeat 2 34 0 271 268 12 12 chr2 197946651 197946733 -52741121 + (TA)n Simple_repeat Simple_repeat 2 83 0 894 231 5 5 chr2 197946874 197947060 -52740794 - MLT1A2 LTR MaLR 0 374 189 238 228 13 13 chr2 197947111 197947190 -52740664 - L1MA5A LINE L1 0 6297 6219 294 95 0 0 chr2 197947192 197947234 -52740620 + (TA)n Simple_repeat Simple_repeat 1 42 0 4381 104 0 0 chr2 197947386 197948004 -52739850 - L1P LINE L1 -4860 1286 669 412 245 79 28 chr2 197948113 197948329 -52739525 - L1ME LINE L1 -680 5484 5258 1893 161 25 5 chr2 197948337 197948712 -52739142 + LTR28 LTR ERV1 3 389 -247 418 266 99 67 chr2 197948826 197949049 -52738805 - L1ME LINE L1 -1432 4714 4500 1893 143 11 0 chr2 197949049 197949354 -52738500 - AluSg SINE Alu 0 308 1 418 266 99 67 chr2 197949354 197949755 -52738099 - L1ME LINE L1 -1646 4500 4068 23 0 0 0 chr2 197949888 197949911 -52737943 + AT_rich Low_complexity Low_complexity 1 23 0 789 171 18 0 chr2 197950623 197950787 -52737067 + L1MA4 LINE L1 6130 6296 -4 21 0 0 0 chr2 197950802 197950823 -52737031 + AT_rich Low_complexity Low_complexity 1 21 0 264 231 137 43 chr2 197951903 197952020 -52735834 + MIR SINE MIR 124 251 -11 263 243 117 47 chr2 197952178 197952392 -52735462 + Charlie7 DNA MER1_type 2383 2611 -1 23 33 0 0 chr2 197952526 197952556 -52735298 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr2 197954163 197954198 -52733656 + AT_rich Low_complexity Low_complexity 1 35 0 853 118 16 0 chr2 197954351 197954478 -52733376 - AluSg SINE Alu -178 132 4 1170 190 0 0 chr2 197954780 197955003 -52732851 + AluJb SINE Alu 87 309 0 37 0 0 0 chr2 197955238 197955275 -52732579 + AT_rich Low_complexity Low_complexity 1 37 0 1219 262 47 64 chr2 197955328 197955795 -52732059 + MLT1C LTR MaLR 1 467 0 41 93 0 0 chr2 197955984 197956102 -52731752 + AT_rich Low_complexity Low_complexity 1 118 0 24 53 0 0 chr2 197956123 197956161 -52731693 + AT_rich Low_complexity Low_complexity 1 38 0 228 182 36 0 chr2 197956211 197956266 -52731588 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 535 266 84 27 chr2 197957254 197957535 -52730319 - L1ME1 LINE L1 -63 6103 5814 25 0 0 0 chr2 197958412 197958437 -52729417 + AT_rich Low_complexity Low_complexity 1 25 0 2108 178 59 0 chr2 197958479 197958867 -52728987 - MER61C LTR ERV1 -10 424 14 254 262 0 0 chr2 197958835 197958896 -52728958 - LTR28 LTR ERV1 -959 61 1 * 25 0 0 0 chr2 197958946 197958971 -52728883 + AT_rich Low_complexity Low_complexity 1 25 0 22 70 0 0 chr2 197959166 197959209 -52728645 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr2 197959628 197959663 -52728191 + AT_rich Low_complexity Low_complexity 1 35 0 1815 178 20 48 chr2 197960022 197960514 -52727340 + MER4A LTR ERV1 1 522 -177 1516 98 39 4 chr2 197960518 197960776 -52727078 - L1PA14 LINE L1 0 6161 5920 511 234 25 45 chr2 197960800 197961001 -52726853 + MER4C LTR ERV1 269 465 0 2331 138 2 58 chr2 197961144 197961571 -52726283 + MER57A LTR ERV1 1 403 0 3463 210 22 47 chr2 197961573 197962420 -52725434 + MER57A-int LTR ERV1 3 828 -6709 325 322 41 23 chr2 197962523 197962694 -52725160 + MER57A-int LTR ERV1 815 988 -4135 799 273 50 12 chr2 197962694 197962936 -52724918 + MER34C LTR ERV1 155 405 -180 236 259 182 47 chr2 197962967 197963137 -52724717 - LTR48 LTR ERV1 -420 367 175 406 194 86 108 chr2 197963245 197963437 -52724417 + MER57A-int LTR ERV1 1743 2511 -2360 303 222 25 0 chr2 197963534 197963615 -52724239 + MER57A-int LTR ERV1 1976 2058 -3065 278 205 36 0 chr2 197963594 197963677 -52724177 + MER57A-int LTR ERV1 3465 3550 -2781 * 4016 121 18 68 chr2 197963677 197964397 -52723457 - LTR12 LTR ERV1 0 688 5 1928 235 35 28 chr2 197964411 197965012 -52722842 - pTR5 LTR ERV1 -1092 1346 742 23 0 0 0 chr2 197965203 197965226 -52722628 + AT_rich Low_complexity Low_complexity 1 23 0 698 161 36 0 chr2 197965236 197965376 -52722478 + FLAM_C SINE Alu 1 144 0 4823 191 60 58 chr2 197965380 197966904 -52720950 + MER57A-int LTR ERV1 3756 5805 -1582 2901 96 55 31 chr2 197966904 197967381 -52720473 - LTR22B LTR ERVK -4 488 1 1708 209 60 49 chr2 197967728 197968268 -52719586 + MER57A-int LTR ERV1 3897 4181 -690 3648 215 56 33 chr2 197968511 197968562 -52719292 + MER57A-int LTR ERV1 6207 6255 -1282 1559 142 17 0 chr2 197968562 197968801 -52719053 - AluSg SINE Alu -12 298 56 3648 215 56 33 chr2 197968801 197969665 -52718189 + MER57A-int LTR ERV1 6255 7143 -394 618 183 125 102 chr2 197969666 197969886 -52717968 + LTR54 LTR ERV1 1 278 -220 180 0 0 0 chr2 197969886 197969906 -52717948 + (CAA)n Simple_repeat Simple_repeat 2 21 0 618 183 125 102 chr2 197969906 197970018 -52717836 + LTR54 LTR ERV1 278 386 -112 375 171 91 23 chr2 197970020 197970108 -52717746 + MER57A-int LTR ERV1 7437 7530 -7 1938 167 5 82 chr2 197970115 197970231 -52717623 + MER57A LTR ERV1 1 124 -279 2186 127 48 20 chr2 197970231 197970585 -52717269 + THE1B LTR MaLR 1 364 0 1938 167 5 82 chr2 197970585 197970905 -52716949 + MER57A LTR ERV1 124 403 0 357 282 169 8 chr2 197971232 197971356 -52716498 - MIR SINE MIR -118 144 1 262 300 100 10 chr2 197971356 197971456 -52716398 + L2 LINE L2 3203 3311 -2 186 43 0 0 chr2 197971901 197971924 -52715930 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 237 33 0 0 chr2 197971952 197971982 -52715872 + (T)n Simple_repeat Simple_repeat 1 30 0 2092 128 0 0 chr2 197972471 197972767 -52715087 - AluSx SINE Alu -16 296 1 338 203 116 50 chr2 197973303 197973422 -52714432 + MER39 LTR ERV1 1 134 -573 1086 218 111 41 chr2 197973422 197973766 -52714088 + MER39 LTR ERV1 340 707 0 21 0 0 0 chr2 197974220 197974241 -52713613 + AT_rich Low_complexity Low_complexity 1 21 0 1508 271 53 52 chr2 197974241 197974807 -52713047 - MLT1F1 LTR MaLR -2 565 1 30 32 0 48 chr2 197975966 197976029 -52711825 + AT_rich Low_complexity Low_complexity 1 60 0 2248 51 0 4 chr2 197976191 197976465 -52711389 + AluY SINE Alu 35 307 -4 23 33 0 0 chr2 197977120 197977150 -52710704 + AT_rich Low_complexity Low_complexity 1 30 0 327 311 0 0 chr2 197978561 197978651 -52709203 + MIR SINE MIR 163 252 -10 23 54 0 0 chr2 197979431 197979468 -52708386 + AT_rich Low_complexity Low_complexity 1 37 0 804 180 37 25 chr2 197979711 197979872 -52707982 + FRAM SINE Alu 1 162 -14 1186 101 0 6 chr2 197980185 197980353 -52707501 - AluSg/x SINE Alu -11 301 135 2808 255 46 23 chr2 197980465 197981297 -52706557 - L1M2 LINE L1 -4878 2331 1154 24 77 0 0 chr2 197982757 197982809 -52705045 + AT_rich Low_complexity Low_complexity 1 52 0 33 25 0 0 chr2 197983633 197983673 -52704181 + AT_rich Low_complexity Low_complexity 1 40 0 425 267 67 27 chr2 197983952 197984141 -52703713 - MLT1H LTR MaLR -304 245 13 21 36 0 0 chr2 197984143 197984171 -52703683 + AT_rich Low_complexity Low_complexity 1 28 0 198 150 0 0 chr2 197984718 197984758 -52703096 + (TA)n Simple_repeat Simple_repeat 2 41 0 192 158 0 0 chr2 197984844 197984882 -52702972 + (CA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr2 197986279 197986302 -52701552 + AT_rich Low_complexity Low_complexity 1 23 0 197 368 92 13 chr2 197986411 197986650 -52701204 - MIR SINE MIR 0 262 5 1075 245 39 60 chr2 197986956 197987369 -52700485 + MLT1D LTR MaLR 21 424 -81 1097 332 31 37 chr2 197988079 197988169 -52699685 - MERVL LTR ERVL -2569 2916 2827 3216 155 22 72 chr2 197988169 197988896 -52698958 + LTR8 LTR ERV1 1 691 0 1097 332 31 37 chr2 197988896 197989596 -52698258 - MERVL LTR ERVL -2658 2827 2333 10643 239 35 17 chr2 197990065 197995378 -52692476 - L1PA16 LINE L1 -1 7603 2045 255 103 0 0 chr2 197995428 197995467 -52692387 + (TG)n Simple_repeat Simple_repeat 1 39 0 322 332 88 84 chr2 197995747 197996021 -52691833 - L1M2 LINE L1 -5782 1067 793 1855 151 48 0 chr2 197996150 197996461 -52691393 - THE1B LTR MaLR 0 364 39 265 270 0 0 chr2 197996461 197996524 -52691330 - L1PA16 LINE L1 -7508 73 11 12581 166 46 9 chr2 197996680 197997653 -52690201 + Tigger1 DNA MER2_type 1 937 -1481 1944 128 31 10 chr2 197997653 197997943 -52689911 - AluSx SINE Alu -16 296 1 12581 166 46 9 chr2 197997943 197999301 -52688553 + Tigger1 DNA MER2_type 937 2418 0 772 227 34 14 chr2 198000759 198000966 -52686888 - L2 LINE L2 -7 3306 3096 611 287 43 19 chr2 198001729 198001938 -52685916 - L2 LINE L2 -405 2909 2696 792 259 30 114 chr2 198001950 198002424 -52685430 - L2 LINE L2 -1111 2203 1770 33 73 0 0 chr2 198002440 198002508 -52685346 + AT_rich Low_complexity Low_complexity 1 68 0 471 298 72 34 chr2 198002528 198002736 -52685118 - MLT1I LTR MaLR -4 405 190 2135 155 83 10 chr2 198002736 198003135 -52684719 + MSTA LTR MaLR 1 428 0 32 26 0 0 chr2 198003397 198003436 -52684418 + AT_rich Low_complexity Low_complexity 1 39 0 419 314 51 0 chr2 198003926 198004063 -52683791 - MIR SINE MIR -71 191 48 317 316 97 30 chr2 198004443 198004680 -52683174 + L2 LINE L2 3012 3264 -49 598 325 31 43 chr2 198005785 198006040 -52681814 + MLT1I LTR MaLR 130 381 -28 1703 158 95 14 chr2 198006049 198006396 -52681458 - THE1C LTR MaLR 0 375 1 316 110 14 27 chr2 198008326 198008399 -52679455 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 225 153 85 17 chr2 198008612 198008671 -52679183 - LTR41 LTR ERVL -708 65 3 21 57 0 0 chr2 198008699 198008734 -52679120 + AT_rich Low_complexity Low_complexity 1 35 0 1999 121 0 0 chr2 198009096 198009410 -52678444 - AluSq SINE Alu 0 314 1 468 312 70 49 chr2 198010224 198010540 -52677314 - MLT1J1 LTR MaLR -118 332 17 618 312 87 9 chr2 198010812 198011030 -52676824 - MIR SINE MIR -21 241 7 188 67 33 0 chr2 198011047 198011077 -52676777 + (TTTC)n Simple_repeat Simple_repeat 3 33 0 54 16 0 0 chr2 198011955 198012016 -52675838 + AT_rich Low_complexity Low_complexity 1 61 0 1814 181 60 0 chr2 198062038 198062403 -52625451 + MER52A LTR ERV1 1369 1755 0 305 266 40 119 chr2 198063064 198063241 -52624613 - MER5A DNA MER1_type -23 166 4 655 327 130 37 chr2 198064050 198064471 -52623383 - L2 LINE L2 -4 3309 2797 348 24 0 0 chr2 198064471 198064512 -52623342 + (TG)n Simple_repeat Simple_repeat 1 41 0 655 327 130 37 chr2 198064512 198064777 -52623077 - L2 LINE L2 -516 2797 2558 246 217 72 0 chr2 198065703 198065786 -52622068 + L1MC4 LINE L1 6614 6702 -1340 3472 166 11 8 chr2 198066445 198067067 -52620787 - L1P LINE L1 -1777 4369 3746 237 193 11 34 chr2 198068503 198068591 -52619263 + (CATA)n Simple_repeat Simple_repeat 3 88 0 756 297 110 24 chr2 198069180 198069670 -52618184 + MLT1L LTR MaLR 10 551 -64 274 345 18 9 chr2 198071157 198071270 -52616584 - L2 LINE L2 -4 3309 3196 722 186 81 86 chr2 198071277 198071487 -52616367 + MER3 DNA MER1_type 1 209 0 281 362 88 25 chr2 198071495 198071813 -52616041 - L2 LINE L2 -122 3191 2854 496 278 87 23 chr2 198074086 198074385 -52613469 - L1M4 LINE L1 -3513 2633 2316 2629 216 10 22 chr2 198074386 198074982 -52612872 - L1MD3 LINE L1 -2 7993 7405 263 248 10 119 chr2 198074984 198075085 -52612769 - MLT1F1 LTR MaLR -443 124 35 386 264 54 0 chr2 198075085 198075233 -52612621 - L1MD3 LINE L1 -879 7116 6961 * 1284 232 119 40 chr2 198075222 198075816 -52612038 - L1MEc LINE L1 -3045 3170 2530 459 214 167 33 chr2 198075824 198076034 -52611820 - L1MEc LINE L1 -4308 2088 1851 1912 303 47 38 chr2 198076050 198077253 -52610601 - L1MEc LINE L1 -5150 1246 34 1523 214 17 0 chr2 198077773 198078068 -52609786 + AluJo SINE Alu 1 300 -12 24 103 0 0 chr2 198078152 198078239 -52609615 + AT_rich Low_complexity Low_complexity 1 87 0 256 315 56 28 chr2 198080737 198080880 -52606974 - MLT1J LTR MaLR -54 457 311 1393 185 76 10 chr2 198080904 198081206 -52606648 - L1MB1 LINE L1 -1 6167 5846 9055 204 40 31 chr2 198081365 198084458 -52603396 - L1MB1 LINE L1 -176 5992 2875 207 370 14 0 chr2 198085236 198085309 -52602545 + MIR SINE MIR 11 84 -178 1104 278 99 28 chr2 198085452 198085887 -52601967 + MER54A LTR ERVL 14 479 -422 588 358 45 36 chr2 198087087 198087668 -52600186 - LTR52-int LTR ERVL -496 3060 2475 849 353 23 3 chr2 198088172 198088520 -52599334 - LTR52-int LTR ERVL -1650 1906 1552 30 27 0 0 chr2 198091456 198091493 -52596361 + AT_rich Low_complexity Low_complexity 1 37 0 292 271 0 0 chr2 198092130 198092200 -52595654 - MLT1J LTR MaLR 0 511 442 197 204 0 37 chr2 198092546 198092600 -52595254 + L2 LINE L2 3262 3313 0 886 171 40 0 chr2 198092755 198092930 -52594924 + L1MA7 LINE L1 6110 6291 0 647 331 52 15 chr2 198093176 198093505 -52594349 + LTR33 LTR ERVL 169 509 -12 3808 206 106 74 chr2 198094393 198095615 -52592239 + MER52A LTR ERV1 53 1313 -442 228 238 16 0 chr2 198097038 198097101 -52590753 + GA-rich Low_complexity Low_complexity 2 65 0 38 52 0 13 chr2 198097129 198097174 -52590680 + AT_rich Low_complexity Low_complexity 1 46 -30 1541 97 156 37 chr2 198097174 198097443 -52590411 + AluY SINE Alu 1 301 0 38 52 0 13 chr2 198097443 198097474 -52590380 + AT_rich Low_complexity Low_complexity 46 76 0 621 231 75 0 chr2 198097551 198097698 -52590156 - MER3 DNA MER1_type 0 209 52 382 283 107 28 chr2 198098323 198098500 -52589354 - MIR SINE MIR -70 192 2 213 178 0 0 chr2 198098540 198098585 -52589269 + (TG)n Simple_repeat Simple_repeat 2 46 0 256 164 30 0 chr2 198098644 198098711 -52589143 + (CA)n Simple_repeat Simple_repeat 2 70 0 21 0 0 0 chr2 198098737 198098758 -52589096 + AT_rich Low_complexity Low_complexity 1 21 0 1714 182 83 40 chr2 198099640 198100172 -52587682 + MLT2A2 LTR ERVL 1 554 0 2516 57 0 0 chr2 198100993 198101290 -52586564 + AluY SINE Alu 1 297 -14 229 339 208 15 chr2 198101699 198101829 -52586025 + MIR SINE MIR 81 235 -27 709 247 0 0 chr2 198102668 198102818 -52585036 + FAM SINE Alu 23 172 -13 571 326 5 15 chr2 198103757 198103953 -52583901 - MER63A DNA MER1_type -7 203 10 228 214 0 0 chr2 198106806 198106848 -52581006 + 5S rRNA rRNA 1 42 -79 712 232 36 36 chr2 198107337 198107531 -52580323 + MIR SINE MIR 11 204 -58 305 293 87 34 chr2 198109638 198109846 -52578008 + MLT1I LTR MaLR 3 221 -188 336 266 70 31 chr2 198110155 198110283 -52577571 + MIR SINE MIR 28 160 -102 220 277 30 20 chr2 198110338 198110439 -52577415 + (TATATG)n Simple_repeat Simple_repeat 1 102 0 244 303 59 53 chr2 198110475 198110627 -52577227 + MIR SINE MIR 109 261 -1 22 0 0 0 chr2 198111513 198111535 -52576319 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 198112349 198112370 -52575484 + AT_rich Low_complexity Low_complexity 1 21 0 344 59 20 0 chr2 198112421 198112472 -52575382 + (TG)n Simple_repeat Simple_repeat 2 53 0 232 419 33 0 chr2 198112561 198112745 -52575109 + MIR SINE MIR 40 229 -33 29 47 0 0 chr2 198113052 198113095 -52574759 + AT_rich Low_complexity Low_complexity 1 43 0 2919 95 9 3 chr2 198113208 198113620 -52574234 + MLT2A1 LTR ERVL 1 480 -40 202 297 31 0 chr2 198113624 198113688 -52574166 + (TA)n Simple_repeat Simple_repeat 1 66 0 609 250 39 0 chr2 198114346 198114526 -52573328 - L1MA9 LINE L1 -43 6269 6083 1556 142 35 24 chr2 198114542 198114830 -52573024 - L1MA9 LINE L1 -365 5947 5657 1242 206 34 3 chr2 198115008 198115300 -52572554 - L1MA8 LINE L1 -7 6284 5984 975 168 0 0 chr2 198115304 198115465 -52572389 + L1MA8 LINE L1 5825 5985 -315 927 274 77 51 chr2 198115968 198116399 -52571455 + MLT1D LTR MaLR 6 447 -58 266 250 15 0 chr2 198116435 198116503 -52571351 + MLT1D LTR MaLR 558 626 0 11135 168 79 3 chr2 198116521 198118517 -52569337 + L1MA3 LINE L1 401 2548 -5017 10076 184 24 38 chr2 198118519 198121607 -52566247 + L1MA3 LINE L1 4673 7717 -7 1644 141 41 0 chr2 198121625 198121915 -52565939 + L1M1 LINE L1 5478 5779 -524 993 268 59 75 chr2 198121981 198122594 -52565260 + L1MEc LINE L1 1004 1725 -4838 2889 161 9 30 chr2 198122594 198123167 -52564687 + L1MA5 LINE L1 5740 6300 0 993 268 59 75 chr2 198123167 198123195 -52564659 + L1MEc LINE L1 1725 1752 -4811 25 65 0 0 chr2 198123334 198123380 -52564474 + AT_rich Low_complexity Low_complexity 1 46 0 373 179 0 0 chr2 198123420 198123487 -52564367 + L1 LINE L1 5209 5275 -871 183 129 0 0 chr2 198123545 198123576 -52564278 + (TC)n Simple_repeat Simple_repeat 1 31 0 33 25 0 0 chr2 198123583 198123623 -52564231 + AT_rich Low_complexity Low_complexity 1 40 0 1643 196 45 11 chr2 198123656 198124009 -52563845 - MLT2D LTR ERVL -47 367 3 21 36 0 0 chr2 198124086 198124114 -52563740 + AT_rich Low_complexity Low_complexity 1 28 0 1044 277 123 28 chr2 198124114 198124612 -52563242 + MLT1H LTR MaLR 3 547 -2 291 122 0 0 chr2 198125200 198125249 -52562605 + (TG)n Simple_repeat Simple_repeat 2 50 0 6093 55 15 19 chr2 198125654 198126630 -52561224 - L1PA7 LINE L1 -107 6047 5071 302 303 48 67 chr2 198126641 198126849 -52561005 - MIR SINE MIR -26 236 33 390 85 0 0 chr2 198126896 198126955 -52560899 + (TC)n Simple_repeat Simple_repeat 2 60 0 276 30 0 0 chr2 198127011 198127044 -52560810 + (TG)n Simple_repeat Simple_repeat 2 34 0 231 36 0 0 chr2 198127313 198127341 -52560513 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 201 39 0 0 chr2 198128083 198128109 -52559745 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 31 82 0 0 chr2 198128168 198128241 -52559613 + AT_rich Low_complexity Low_complexity 1 73 0 797 166 25 0 chr2 198128302 198128459 -52559395 - L1MB1 LINE L1 -1 6167 6007 23 0 0 0 chr2 198129240 198129263 -52558591 + AT_rich Low_complexity Low_complexity 1 23 0 334 333 9 0 chr2 198129292 198129406 -52558448 - L2 LINE L2 -15 3298 3184 4798 139 8 5 chr2 198129725 198130487 -52557367 + L1PA16 LINE L1 5400 6163 -3 3866 107 8 41 chr2 198130514 198131143 -52556711 - LTR14B LTR ERVK 0 608 1 741 221 131 45 chr2 198131410 198131654 -52556200 - L1MC4a LINE L1 -931 6877 6613 23 0 0 0 chr2 198131727 198131750 -52556104 + AT_rich Low_complexity Low_complexity 1 23 0 1491 229 195 8 chr2 198131933 198132410 -52555444 + Tigger6a DNA MER2_type 10 575 -508 568 273 43 90 chr2 198132434 198132980 -52554874 - L1MEc LINE L1 -3531 2684 2114 225 0 0 0 chr2 198132980 198133005 -52554849 + (TA)n Simple_repeat Simple_repeat 2 26 0 2273 82 0 0 chr2 198133009 198133313 -52554541 - AluY SINE Alu 0 305 2 568 273 43 90 chr2 198133313 198133881 -52553973 - L1MEc LINE L1 -4104 2111 1538 325 355 77 47 chr2 198133943 198134607 -52553247 - L1MEc LINE L1 -5628 768 85 23 68 0 0 chr2 198134921 198134965 -52552889 + AT_rich Low_complexity Low_complexity 1 44 0 31 26 0 0 chr2 198135054 198135092 -52552762 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr2 198135195 198135216 -52552638 + AT_rich Low_complexity Low_complexity 1 21 0 1454 261 28 60 chr2 198137868 198138404 -52549450 - MLT1F LTR MaLR 0 542 24 3578 148 30 17 chr2 198138420 198139061 -52548793 - L1PB4 LINE L1 -12 6144 5496 1397 241 31 15 chr2 198139803 198140434 -52547420 - L1P5 LINE L1 -564 5592 4952 22 0 0 0 chr2 198141221 198141243 -52546611 + AT_rich Low_complexity Low_complexity 1 22 0 422 137 27 0 chr2 198141796 198141869 -52545985 + MADE1 DNA Mariner 1 75 -5 2826 120 14 9 chr2 198143631 198144063 -52543791 - MER57B LTR ERV1 0 434 1 1487 102 119 4 chr2 198144063 198144289 -52543565 - MER57B-int LTR ERV1 0 7537 7286 531 172 11 0 chr2 198144298 198144391 -52543463 - LTR54B LTR ERV1 -400 98 5 19370 124 45 35 chr2 198144393 198148410 -52539444 - MER57B-int LTR ERV1 -390 7147 2190 677 126 0 0 chr2 198148392 198148495 -52539359 - MER57B-int LTR ERV1 -4958 2579 2477 * 3541 170 32 15 chr2 198148496 198149281 -52538573 - MER57B-int LTR ERV1 -4231 3585 648 * 4426 147 33 1 chr2 198149273 198149976 -52537878 - MER57B-int LTR ERV1 -6808 729 5 1094 150 57 0 chr2 198149984 198150177 -52537677 - MER57B LTR ERV1 -2 432 229 1285 190 91 195 chr2 198150190 198151138 -52536716 + LTR1B LTR ERV1 12 1020 0 1528 141 0 17 chr2 198151140 198151374 -52536480 - MER57B LTR ERV1 -204 230 1 21 0 0 0 chr2 198152213 198152234 -52535620 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 198152392 198152415 -52535439 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 198153242 198153272 -52534582 + AT_rich Low_complexity Low_complexity 1 30 0 38 61 0 0 chr2 198153522 198153588 -52534266 + AT_rich Low_complexity Low_complexity 1 66 0 26776 32 5 2 chr2 198155137 198159159 -52528695 + L1PA3 LINE L1 2125 6155 0 243 259 0 0 chr2 198159381 198159466 -52528388 + (TA)n Simple_repeat Simple_repeat 2 86 0 1895 195 31 17 chr2 198159861 198160215 -52527639 + MLT2B1 LTR ERVL 76 434 -86 219 234 16 31 chr2 198160384 198160448 -52527406 + (CATA)n Simple_repeat Simple_repeat 2 64 0 505 0 31 0 chr2 198160744 198160809 -52527045 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 4831 231 72 50 chr2 198160825 198161604 -52526250 + L1MB1 LINE L1 2482 3242 -2904 2332 115 0 0 chr2 198161604 198161916 -52525938 - AluSx SINE Alu 0 312 1 4831 231 72 50 chr2 198161916 198162756 -52525098 + L1MB1 LINE L1 3242 4152 -1994 1608 171 11 21 chr2 198162756 198163081 -52524773 - AluJb SINE Alu 0 322 1 4831 231 72 50 chr2 198163081 198163348 -52524506 + L1MB1 LINE L1 4152 4412 -1734 1763 173 26 22 chr2 198163344 198163912 -52523942 - L1M2 LINE L1 -744 5402 4977 * 1057 181 122 0 chr2 198163905 198164142 -52523712 + L1MB1 LINE L1 5528 5793 -375 * 839 190 43 22 chr2 198164148 198164332 -52523522 + L1MB1 LINE L1 5980 6167 -1 21 57 0 0 chr2 198165570 198165605 -52522249 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 198166694 198166723 -52521131 + AT_rich Low_complexity Low_complexity 1 29 0 4576 27 4 5 chr2 198166785 198167336 -52520518 - L1PA4 LINE L1 -2 6153 5604 779 326 199 12 chr2 198167553 198168065 -52519789 + L2 LINE L2 2209 2816 -498 1125 161 50 0 chr2 198168068 198168267 -52519587 - L1PA12 LINE L1 -143 6025 5817 6445 66 11 0 chr2 198168268 198169793 -52518061 - L1PA7 LINE L1 0 6154 4613 9458 109 8 11 chr2 198169793 198171255 -52516599 + L1P LINE L1 1988 3444 -2702 439 311 0 22 chr2 198171558 198171693 -52516161 + MIR SINE MIR 125 256 -6 277 350 32 0 chr2 198172533 198172656 -52515198 - MIR3 SINE MIR -9 199 73 2292 110 0 0 chr2 198172788 198173098 -52514756 - AluSx SINE Alu -2 310 1 302 250 60 0 chr2 198173540 198173640 -52514214 - MIR SINE MIR -71 191 86 214 163 50 25 chr2 198173982 198174062 -52513792 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 26 0 0 0 chr2 198174452 198174478 -52513376 + AT_rich Low_complexity Low_complexity 1 26 0 251 325 74 31 chr2 198176187 198176350 -52511504 + MER5B DNA MER1_type 1 170 -8 223 284 119 18 chr2 198176392 198176501 -52511353 + MIR SINE MIR 53 172 -90 185 32 0 65 chr2 198178199 198178230 -52509624 + (TAAAAA)n Simple_repeat Simple_repeat 1 29 0 204 243 0 0 chr2 198178531 198178568 -52509286 + MIR SINE MIR 218 254 -8 23 0 0 0 chr2 198181062 198181085 -52506769 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 198181237 198181259 -52506595 + AT_rich Low_complexity Low_complexity 1 22 0 358 226 20 10 chr2 198181349 198181451 -52506403 + MER46C DNA MER2_type 81 183 -155 1497 254 85 39 chr2 198181573 198182207 -52505647 + L1MC4 LINE L1 6982 7644 -398 470 250 0 9 chr2 198182945 198183053 -52504801 - L1MD2 LINE L1 -57 6302 6196 287 280 184 29 chr2 198183281 198183339 -52504515 - L2 LINE L2 -55 3258 3210 324 70 0 0 chr2 198183339 198183382 -52504472 + (TG)n Simple_repeat Simple_repeat 1 43 0 287 280 184 29 chr2 198183382 198183562 -52504292 - L2 LINE L2 -103 3210 2983 270 0 0 0 chr2 198183568 198183598 -52504256 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 600 179 24 62 chr2 198183646 198183791 -52504063 + MSTD LTR MaLR 227 346 -50 1471 302 61 41 chr2 198183803 198184458 -52503396 - L2 LINE L2 -342 2972 2305 199 371 31 41 chr2 198184801 198184995 -52502859 + L2 LINE L2 2609 2800 -514 26 0 0 0 chr2 198185323 198185349 -52502505 + AT_rich Low_complexity Low_complexity 1 26 0 1883 231 81 24 chr2 198186436 198186977 -52500877 - MER90 LTR ERV1 0 614 1 5167 23 0 3 chr2 198187577 198188186 -52499668 + L1PA4 LINE L1 5549 6155 0 23 33 0 0 chr2 198188558 198188588 -52499266 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr2 198188742 198188773 -52499081 + AT_rich Low_complexity Low_complexity 1 31 0 1789 158 92 6 chr2 198188798 198189115 -52498739 + MER7A DNA MER2_type 4 345 -1 24 53 0 0 chr2 198190043 198190081 -52497773 + AT_rich Low_complexity Low_complexity 1 38 0 226 255 0 0 chr2 198191136 198191187 -52496667 + MER94 DNA DNA 72 122 -12 1311 222 115 11 chr2 198191664 198192020 -52495834 - MSTD LTR MaLR 0 396 4 5756 237 95 30 chr2 198192029 198193652 -52494202 - MSTD-int LTR MaLR -7 1728 1 1510 254 20 5 chr2 198193653 198194043 -52493811 - MSTD LTR MaLR 0 396 1 297 192 27 27 chr2 198194086 198194159 -52493695 + Tigger5 DNA MER2_type 2250 2322 -1 429 283 0 0 chr2 198194166 198194265 -52493589 - Tigger5 DNA MER2_type -2224 99 1 444 154 115 0 chr2 198194276 198194354 -52493500 + Tigger5 DNA MER2_type 2237 2323 0 1314 241 60 36 chr2 198195524 198195939 -52491915 - MLT1C LTR MaLR -3 464 40 2214 70 11 3 chr2 198196059 198196344 -52491510 - AluY SINE Alu -14 297 11 2741 116 5 14 chr2 198196625 198197047 -52490807 + L1PA14 LINE L1 5744 6161 0 627 218 63 6 chr2 198197070 198197244 -52490610 + L1MC4 LINE L1 6704 6887 -1155 312 235 80 53 chr2 198197346 198197533 -52490321 + L1MC4 LINE L1 6882 7073 -969 225 163 0 0 chr2 198197588 198197637 -52490217 + (TG)n Simple_repeat Simple_repeat 2 50 0 1246 219 219 36 chr2 198197637 198197852 -52490002 + L1MC4 LINE L1 7102 7276 -766 2216 76 10 17 chr2 198197852 198198153 -52489701 + AluY SINE Alu 1 299 -12 1246 219 219 36 chr2 198198153 198198489 -52489365 + L1MC4 LINE L1 7276 7754 -288 258 249 19 19 chr2 198198556 198198648 -52489206 + GA-rich Low_complexity Low_complexity 1 156 0 2866 163 37 66 chr2 198200702 198201400 -52486454 - L1MA9 LINE L1 -42 6270 5593 2244 142 0 0 chr2 198201411 198201771 -52486083 - L1PB1 LINE L1 -8 6143 5784 216 133 0 44 chr2 198201777 198201822 -52486032 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 3324 106 15 19 chr2 198201828 198202356 -52485498 - L1PB1 LINE L1 -360 5791 5266 1581 177 6 9 chr2 198202357 198202646 -52485208 - L1MA9 LINE L1 -706 5606 5317 261 0 0 0 chr2 198202646 198202675 -52485179 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1581 177 6 9 chr2 198202675 198202701 -52485153 - L1MA9 LINE L1 -995 5317 5292 * 4130 199 49 8 chr2 198202700 198203678 -52484176 + L1MA9 LINE L1 4290 5307 -839 200 307 13 0 chr2 198203821 198203896 -52483958 + (TAAA)n Simple_repeat Simple_repeat 1 76 0 398 340 30 39 chr2 198203918 198204121 -52483733 + MIR SINE MIR 13 213 -49 817 244 0 0 chr2 198204131 198204299 -52483555 - MLT1B LTR MaLR 0 390 223 6525 67 28 7 chr2 198204301 198204974 -52482880 - L1PA7 LINE L1 0 6154 5497 1972 128 3 24 chr2 198204974 198205272 -52482582 - AluSg SINE Alu -18 292 1 6525 67 28 7 chr2 198205272 198206127 -52481727 - L1PA7 LINE L1 -657 5497 4613 8434 112 14 3 chr2 198206127 198207436 -52480418 + L1P LINE L1 1988 3310 -2836 851 218 52 44 chr2 198207436 198207665 -52480189 - MLT1B LTR MaLR -159 231 1 23 54 0 0 chr2 198209519 198209556 -52478298 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr2 198209967 198209997 -52477857 + AT_rich Low_complexity Low_complexity 1 30 0 1457 235 0 3 chr2 198210198 198210504 -52477350 - AluJb SINE Alu -7 305 1 781 223 58 0 chr2 198210614 198210820 -52477034 - L1MEc LINE L1 -3587 2628 2411 20196 30 1 0 chr2 198210828 198214053 -52473801 + L1PA3 LINE L1 2935 6172 0 842 308 108 8 chr2 198214075 198214426 -52473428 - L1MEc LINE L1 -5890 506 121 2428 81 0 0 chr2 198214715 198215024 -52472830 + AluSc SINE Alu 1 309 0 234 205 51 0 chr2 198415662 198415740 -52272114 + (TA)n Simple_repeat Simple_repeat 1 82 0 370 51 0 63 chr2 198416411 198416490 -52271364 + (TA)n Simple_repeat Simple_repeat 2 75 0 1133 114 23 6 chr2 198416506 198416682 -52271172 - L1P5 LINE L1 -359 5792 5614 * 4482 216 7 9 chr2 198416680 198417718 -52270136 - L1 LINE L1 -982 5164 4129 4065 202 6 12 chr2 198417715 198418595 -52269259 + L1 LINE L1 3249 4122 -2024 * 1649 262 113 21 chr2 198419115 198419919 -52267935 - L1MEc LINE L1 -1738 4342 3465 937 284 53 4 chr2 198419935 198420390 -52267464 - L1MEc LINE L1 -2708 3372 2896 807 293 113 47 chr2 198420408 198420600 -52267254 - L1MEc LINE L1 -3404 2676 2498 2182 127 0 0 chr2 198420600 198420899 -52266955 + AluSx SINE Alu 1 299 -13 807 293 113 47 chr2 198420899 198421810 -52266044 - L1MEc LINE L1 -3582 2498 1480 570 193 21 35 chr2 198421833 198421978 -52265876 - L1MA8 LINE L1 -22 6269 6127 * 690 240 147 34 chr2 198421965 198422319 -52265535 - L1MEc LINE L1 -4630 1450 1057 562 277 95 22 chr2 198422336 198422567 -52265287 - L1MEc LINE L1 -5472 598 351 382 288 52 20 chr2 198422664 198422817 -52265037 - L1MEc LINE L1 -5878 192 35 285 279 145 23 chr2 198424128 198424300 -52263554 + L1MC/D LINE L1 5625 5817 -1991 282 29 0 0 chr2 198424308 198424343 -52263511 + (TA)n Simple_repeat Simple_repeat 1 35 0 334 179 14 69 chr2 198424379 198424524 -52263330 + (TA)n Simple_repeat Simple_repeat 2 138 0 22 0 0 0 chr2 198425009 198425031 -52262823 + AT_rich Low_complexity Low_complexity 1 22 0 763 47 71 12 chr2 198425031 198425200 -52262654 + (TA)n Simple_repeat Simple_repeat 2 180 0 462 101 0 0 chr2 198425384 198425453 -52262401 + (CA)n Simple_repeat Simple_repeat 2 70 0 464 353 59 57 chr2 198427290 198427732 -52260122 + L2 LINE L2 2867 3309 -4 697 87 0 0 chr2 198428510 198428613 -52259241 - L1PA13 LINE L1 0 6163 6061 2043 116 8 1 chr2 198428616 198428955 -52258899 - L1PA12 LINE L1 -303 5851 5497 37 0 0 0 chr2 198429062 198429099 -52258755 + AT_rich Low_complexity Low_complexity 1 37 0 312 91 0 0 chr2 198429577 198429621 -52258233 + (TA)n Simple_repeat Simple_repeat 2 45 0 1310 239 61 41 chr2 198431627 198432067 -52255787 - MLT1D LTR MaLR 0 505 57 441 209 93 112 chr2 198432077 198432292 -52255562 - MLT1D LTR MaLR -294 211 1 1569 262 33 84 chr2 198432298 198433059 -52254795 - MLT1D-int LTR MaLR -5 1730 653 1508 187 44 9 chr2 198433068 198433383 -52254471 - MER68 LTR ERV1 -236 326 1 1295 263 74 57 chr2 198433488 198434086 -52253768 + MER76 LTR ERV 27 634 -54 2082 282 20 11 chr2 198434111 198434757 -52253097 - MLT1D-int LTR MaLR -719 652 1 1285 227 106 84 chr2 198434757 198435170 -52252684 - MLT1D LTR MaLR 0 505 88 23 68 0 0 chr2 198435593 198435637 -52252217 + AT_rich Low_complexity Low_complexity 1 44 0 1285 198 12 20 chr2 198437740 198438020 -52249834 + AluJb SINE Alu 34 311 0 24 32 0 0 chr2 198438028 198438059 -52249795 + AT_rich Low_complexity Low_complexity 1 31 0 2179 117 56 17 chr2 198438237 198438595 -52249259 + THE1C LTR MaLR 4 375 0 258 280 63 26 chr2 198439501 198439690 -52248164 + HAL1 LINE L1 1449 1644 -863 1952 187 35 16 chr2 198439931 198440354 -52247500 - Tigger2a DNA MER2_type -3 431 1 29 0 0 0 chr2 198440935 198440964 -52246890 + AT_rich Low_complexity Low_complexity 1 29 0 4798 42 0 5 chr2 198441013 198441638 -52246216 - L1P LINE L1 -2659 3487 2866 2470 51 6 0 chr2 198441741 198442054 -52245800 - L1PA4 LINE L1 -3 6152 5838 216 0 0 0 chr2 198442729 198442753 -52245101 + (A)n Simple_repeat Simple_repeat 1 24 0 245 330 0 0 chr2 198443110 198443216 -52244638 + L1MC4 LINE L1 6353 6458 -1584 4076 207 51 20 chr2 198443227 198444647 -52243207 - L1MA5 LINE L1 -15 6987 5518 562 277 0 0 chr2 198444636 198444784 -52243070 - L1MA5 LINE L1 -3418 3430 3283 * 11464 109 3 18 chr2 198444785 198447335 -52240519 - L1PA7 LINE L1 -3 6151 3624 7468 125 11 0 chr2 198447335 198448513 -52239341 + L1P LINE L1 2395 3585 -2561 4223 188 31 18 chr2 198448510 198449776 -52238078 - L1MA5 LINE L1 -3547 3301 2021 * 3682 220 98 7 chr2 198449781 198450635 -52237219 - L1MA5 LINE L1 -5915 934 3 418 247 17 75 chr2 198450634 198450694 -52237160 + L1MC4 LINE L1 6443 6505 -1537 * 2008 113 0 33 chr2 198450694 198450996 -52236858 + AluSg SINE Alu 1 292 -18 418 247 17 75 chr2 198450996 198451109 -52236745 + L1MC4 LINE L1 6505 6606 -1436 938 168 59 5 chr2 198451109 198451312 -52236542 + L1PA16 LINE L1 5947 6160 -6 1832 230 76 63 chr2 198451318 198452141 -52235713 + L1MC4 LINE L1 6150 8042 0 559 340 10 10 chr2 198452769 198452966 -52234888 + MIR SINE MIR 7 203 -59 34 0 0 0 chr2 198454190 198454224 -52233630 + AT_rich Low_complexity Low_complexity 1 34 0 1227 136 45 29 chr2 198454532 198454547 -52233307 - L1MA9 LINE L1 -48 6264 6251 3910 34 4 2 chr2 198454547 198455021 -52232833 - L1PA4 LINE L1 -4 6151 5677 1227 136 45 29 chr2 198455021 198455247 -52232607 - L1MA9 LINE L1 -61 6251 6019 1794 169 0 22 chr2 198457583 198457902 -52229952 + AluJo SINE Alu 1 312 0 387 60 0 0 chr2 198459672 198459722 -52228132 + (TG)n Simple_repeat Simple_repeat 2 51 0 214 230 69 0 chr2 198459785 198459872 -52227982 + (TCTA)n Simple_repeat Simple_repeat 2 94 0 2648 153 62 13 chr2 198459883 198460347 -52227507 + MER1A DNA MER1_type 19 505 -24 252 0 0 0 chr2 198460368 198460396 -52227458 + (TAGA)n Simple_repeat Simple_repeat 1 28 0 200 205 0 0 chr2 198460996 198461035 -52226819 + A-rich Low_complexity Low_complexity 4 42 0 440 360 55 32 chr2 198461251 198461504 -52226350 - MIR SINE MIR -3 259 1 213 65 0 0 chr2 198462263 198462294 -52225560 + (GA)n Simple_repeat Simple_repeat 1 31 0 23 0 0 0 chr2 198463294 198463317 -52224537 + AT_rich Low_complexity Low_complexity 1 23 0 323 252 17 17 chr2 198465030 198465149 -52222705 + L1 LINE L1 4311 4429 -1717 * 4111 93 17 0 chr2 198465136 198466029 -52221825 - L1P3 LINE L1 -483 5671 4769 3880 73 9 4 chr2 198466018 198466549 -52221305 + L1PA8 LINE L1 5632 6165 -7 * 606 213 69 17 chr2 198466555 198466729 -52221125 + L1 LINE L1 4422 4604 -1542 317 224 62 75 chr2 198468333 198468494 -52219360 + L1MCa LINE L1 1968 2126 -4300 394 291 189 20 chr2 198469058 198469364 -52218490 - L1MC4 LINE L1 -551 7491 7134 802 325 68 6 chr2 198469645 198469956 -52217898 - L1MC4 LINE L1 -1064 6978 6649 185 139 23 0 chr2 198470301 198470344 -52217510 + T-rich Low_complexity Low_complexity 2 45 0 328 338 7 21 chr2 198470717 198470859 -52216995 + MIR SINE MIR 91 230 -32 4811 154 17 6 chr2 198472375 198473201 -52214653 - L1PA16 LINE L1 0 6166 5332 2923 233 1 43 chr2 198473186 198473985 -52213869 + L1PA16 LINE L1 4585 5350 -796 * 1039 148 106 18 chr2 198474020 198474237 -52213617 + MER46A DNA MER2_type 1 236 0 329 286 71 32 chr2 198474237 198474391 -52213463 - L1MEc LINE L1 -4144 2252 2093 1109 194 201 0 chr2 198475482 198475771 -52212083 + MER7A DNA MER2_type 1 345 -1 3836 241 48 12 chr2 198475929 198476910 -52210944 - MER45B DNA AcHobo -23 1017 2 754 307 62 71 chr2 198477129 198477262 -52210592 + HERVL LTR ERVL 2136 2269 -3495 3038 95 11 28 chr2 198477262 198477723 -52210131 + L1PA8 LINE L1 5706 6158 -14 754 307 62 71 chr2 198477723 198478042 -52209812 + HERVL LTR ERVL 2269 2584 -3180 292 306 67 61 chr2 198478213 198478393 -52209461 + HERVL LTR ERVL 4171 4329 -1325 452 185 11 11 chr2 198478481 198478573 -52209281 - L1PA16 LINE L1 -165 6001 5910 232 121 0 0 chr2 198478571 198478604 -52209250 + L1PA16 LINE L1 5928 5960 -206 * 554 123 0 0 chr2 198478622 198478703 -52209151 - L1PA16 LINE L1 -251 5915 5835 763 196 37 6 chr2 198478712 198478875 -52208979 + L1PA16 LINE L1 5997 6164 -2 1575 90 22 5 chr2 198479004 198479226 -52208628 - AluSp SINE Alu -4 309 84 514 353 65 35 chr2 198479503 198479835 -52208019 + HERVL LTR ERVL 4895 5244 -520 2115 65 6 89 chr2 198479835 198480160 -52207694 + AluY SINE Alu 1 298 -13 514 353 65 35 chr2 198480160 198480255 -52207599 + HERVL LTR ERVL 5244 5335 -429 2218 124 26 3 chr2 198480498 198480845 -52207009 + THE1A LTR MaLR 1 355 0 25 0 0 0 chr2 198480854 198480879 -52206975 + AT_rich Low_complexity Low_complexity 1 25 0 1881 166 3 12 chr2 198480879 198481205 -52206649 - Tigger1 DNA MER2_type -2093 325 3 950 290 92 39 chr2 198481205 198481723 -52206131 + L2 LINE L2 2532 3084 -229 2214 133 0 19 chr2 198481772 198482139 -52205715 - L1PB1 LINE L1 -1 6150 5791 322 246 17 74 chr2 198482155 198482330 -52205524 + CT-rich Low_complexity Low_complexity 1 165 0 405 277 88 34 chr2 198482435 198482449 -52205405 + LTR33 LTR ERVL 2 14 -507 6078 98 45 30 chr2 198482449 198483404 -52204450 + LTR5 LTR ERVK 1 969 0 405 277 88 34 chr2 198483404 198483537 -52204317 + LTR33 LTR ERVL 14 157 -364 268 294 20 29 chr2 198483601 198483703 -52204151 + LTR33 LTR ERVL 284 384 -137 392 282 86 0 chr2 198484458 198484575 -52203279 - MER94 DNA DNA 0 134 8 1296 141 93 120 chr2 198484973 198485433 -52202421 - LTR7 LTR ERV1 -2 448 1 21 36 0 0 chr2 198485467 198485495 -52202359 + AT_rich Low_complexity Low_complexity 1 28 0 25 65 0 0 chr2 198485508 198485554 -52202300 + AT_rich Low_complexity Low_complexity 1 46 0 30 77 0 0 chr2 198485756 198485821 -52202033 + AT_rich Low_complexity Low_complexity 1 65 0 1644 187 35 0 chr2 198485821 198486104 -52201750 - AluSx SINE Alu -19 293 1 428 278 91 0 chr2 198486679 198486855 -52200999 - L1MC5 LINE L1 -742 7219 7028 571 226 30 8 chr2 198487342 198487475 -52200379 - AluJb SINE Alu -83 229 94 330 288 117 0 chr2 198487530 198487641 -52200213 + L2 LINE L2 3188 3311 -2 2025 102 10 7 chr2 198488087 198488380 -52199474 + AluSg SINE Alu 1 294 -16 305 375 31 5 chr2 198489014 198489206 -52198648 - MIR SINE MIR 0 262 66 23 33 0 0 chr2 198489484 198489514 -52198340 + AT_rich Low_complexity Low_complexity 1 30 0 41 48 0 0 chr2 198489558 198489620 -52198234 + AT_rich Low_complexity Low_complexity 1 62 0 247 169 46 15 chr2 198490181 198490246 -52197608 + T-rich Low_complexity Low_complexity 2 68 0 439 149 0 0 chr2 198491219 198491293 -52196561 + MADE1 DNA Mariner 4 77 -3 2023 169 85 30 chr2 198491312 198491816 -52196038 + L1MA6 LINE L1 5768 6299 -1 338 276 122 46 chr2 198494249 198494445 -52193409 + MIR SINE MIR 6 216 -46 221 230 30 10 chr2 198494449 198494549 -52193305 + (TATAA)n Simple_repeat Simple_repeat 3 104 0 216 201 52 35 chr2 198494498 198494672 -52193182 + (TA)n Simple_repeat Simple_repeat 1 177 0 * 34 24 0 0 chr2 198494717 198494758 -52193096 + AT_rich Low_complexity Low_complexity 1 41 0 200 310 99 0 chr2 198494849 198494920 -52192934 - MIR SINE MIR -11 251 174 613 67 86 3 chr2 198494970 198495287 -52192567 + (TA)n Simple_repeat Simple_repeat 1 343 0 408 353 23 0 chr2 198495540 198495673 -52192181 + MIR SINE MIR 5 140 -122 2434 31 0 3 chr2 198495932 198496245 -52191609 - AluY SINE Alu 0 312 1 384 297 103 5 chr2 198496291 198496476 -52191378 - L2 LINE L2 0 3313 3111 2083 134 3 0 chr2 198496584 198496889 -52190965 - AluSx SINE Alu -6 306 1 213 380 0 0 chr2 198496938 198497009 -52190845 - L2 LINE L2 -313 3000 2930 23 33 0 0 chr2 198497204 198497234 -52190620 + AT_rich Low_complexity Low_complexity 1 30 0 198 417 19 0 chr2 198498325 198498433 -52189421 + L2 LINE L2 3163 3272 0 350 369 50 0 chr2 198498960 198499101 -52188753 - L2 LINE L2 -316 2997 2850 314 343 47 35 chr2 198499483 198499652 -52188202 - MIR3 SINE MIR -3 205 35 203 382 10 10 chr2 198500071 198500173 -52187681 + MIR SINE MIR 31 132 -130 297 133 0 0 chr2 198500425 198500470 -52187384 - MADE1 DNA Mariner -33 47 3 209 333 15 0 chr2 198500912 198500978 -52186876 - MIR3 SINE MIR -43 165 99 21 36 0 0 chr2 198501190 198501218 -52186636 + AT_rich Low_complexity Low_complexity 1 28 0 330 380 51 43 chr2 198501755 198502129 -52185725 + L2 LINE L2 2891 3267 -5 212 167 21 0 chr2 198504779 198504827 -52183027 + (TG)n Simple_repeat Simple_repeat 1 49 0 189 74 0 0 chr2 198505565 198505592 -52182262 + (CTG)n Simple_repeat Simple_repeat 3 29 0 272 257 123 49 chr2 198505615 198505776 -52182078 - MLT1H LTR MaLR -1 554 394 287 195 58 13 chr2 198506235 198506389 -52181465 + (TA)n Simple_repeat Simple_repeat 1 161 0 457 74 0 158 chr2 198506523 198506618 -52181236 - MADE1 DNA Mariner 0 80 1 246 211 53 13 chr2 198506762 198506838 -52181016 - MER116 DNA Mariner -1 79 1 441 84 0 0 chr2 198506872 198506943 -52180911 + (GA)n Simple_repeat Simple_repeat 2 72 0 471 243 200 132 chr2 198507907 198508633 -52179221 - MER61D LTR ERV1 0 1755 335 742 268 11 11 chr2 198508653 198508832 -52179022 - LTR28 LTR ERV1 -841 179 1 1430 165 86 29 chr2 198509784 198510063 -52177791 - AluSx SINE Alu -17 295 1 22 0 0 0 chr2 198510271 198510293 -52177561 + AT_rich Low_complexity Low_complexity 1 22 0 1890 148 65 31 chr2 198510671 198511023 -52176831 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr2 198511326 198511350 -52176504 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 198512449 198512484 -52175370 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr2 198513318 198513349 -52174505 + AT_rich Low_complexity Low_complexity 1 31 0 446 296 142 0 chr2 198514542 198514718 -52173136 + MIR SINE MIR 38 238 -24 231 282 12 12 chr2 198514754 198514839 -52173015 + L2 LINE L2 2146 2230 -1084 24 0 0 0 chr2 198515393 198515417 -52172437 + AT_rich Low_complexity Low_complexity 1 24 0 287 314 67 0 chr2 198516200 198516305 -52171549 + L2 LINE L2 2965 3076 -196 21 36 0 0 chr2 198516366 198516394 -52171460 + AT_rich Low_complexity Low_complexity 1 28 0 586 308 27 31 chr2 198516733 198516957 -52170897 + MLT1H LTR MaLR 18 240 -309 736 214 14 0 chr2 198516958 198517103 -52170751 - AluJb SINE Alu -1 311 165 387 208 131 109 chr2 198517209 198517416 -52170438 + MLT1H LTR MaLR 331 539 -10 326 298 50 64 chr2 198517487 198517705 -52170149 + L2 LINE L2 3095 3309 -4 23 33 0 0 chr2 198518395 198518425 -52169429 + AT_rich Low_complexity Low_complexity 1 30 0 216 0 0 0 chr2 198519090 198519114 -52168740 + (T)n Simple_repeat Simple_repeat 1 24 0 924 272 30 49 chr2 198519506 198519811 -52168043 - LTR16A LTR ERVL -53 397 99 266 325 184 24 chr2 198522655 198522867 -52164987 - MIR SINE MIR -9 253 8 294 345 95 36 chr2 198523497 198523665 -52164189 + L2 LINE L2 3054 3231 -41 34 55 0 0 chr2 198523773 198523828 -52164026 + AT_rich Low_complexity Low_complexity 1 55 0 1653 116 0 17 chr2 198524212 198524445 -52163409 + AluSg1 SINE Alu 51 279 -30 232 227 117 47 chr2 198525335 198525463 -52162391 - HAL1 LINE L1 -1109 1398 1262 575 265 36 0 chr2 198525474 198525670 -52162184 - L1M4 LINE L1 -967 5179 4977 810 238 20 63 chr2 198525684 198525723 -52162131 - L1M4 LINE L1 -1316 4830 4791 2075 68 62 0 chr2 198525723 198525903 -52161951 - AluY SINE Alu -1 310 104 225 0 0 0 chr2 198525903 198525928 -52161926 + (TG)n Simple_repeat Simple_repeat 2 26 0 2075 68 62 0 chr2 198525928 198526039 -52161815 - AluY SINE Alu -207 104 1 810 238 20 63 chr2 198526039 198526301 -52161553 - L1M4 LINE L1 -1355 4791 4542 709 256 46 14 chr2 198526301 198526586 -52161268 - L1M4 LINE L1 -1405 4741 4448 291 108 0 46 chr2 198526929 198526994 -52160860 + (TA)n Simple_repeat Simple_repeat 1 62 0 240 82 16 49 chr2 198526996 198527057 -52160797 + L1MCa LINE L1 2006 2064 -4362 253 113 0 38 chr2 198527057 198527110 -52160744 + (TA)n Simple_repeat Simple_repeat 2 52 0 370 248 130 77 chr2 198527463 198527802 -52160052 + L1M4 LINE L1 2994 3350 -2796 269 207 8 8 chr2 198529441 198529571 -52158283 + GA-rich Low_complexity Low_complexity 1 130 0 2031 96 25 4 chr2 198530986 198531266 -52156588 + AluSc SINE Alu 3 288 -21 23 0 0 0 chr2 198531266 198531289 -52156565 + AT_rich Low_complexity Low_complexity 1 23 0 263 245 56 28 chr2 198531607 198531750 -52156104 - L1M2 LINE L1 -854 5437 5291 24 0 0 0 chr2 198531774 198531798 -52156056 + AT_rich Low_complexity Low_complexity 1 24 0 498 255 31 43 chr2 198532320 198532481 -52155373 - MER5A DNA MER1_type 0 189 31 2571 45 0 3 chr2 198532516 198532825 -52155029 - AluY SINE Alu -3 308 1 21 0 0 0 chr2 198533543 198533564 -52154290 + AT_rich Low_complexity Low_complexity 1 21 0 288 215 13 51 chr2 198533681 198533760 -52154094 - L1ME LINE L1 -598 5566 5491 273 269 39 29 chr2 198533927 198534031 -52153823 - L1M3d LINE L1 -5776 115 11 359 295 71 36 chr2 198534044 198534840 -52153014 - L1ME LINE L1 -722 5442 4616 352 243 51 45 chr2 198534847 198535024 -52152830 - L1ME LINE L1 -2858 3288 3111 301 262 101 72 chr2 198535080 198535427 -52152427 - L1ME LINE L1 -3143 3003 2647 241 221 23 23 chr2 198535461 198535547 -52152307 - L1ME LINE L1 -3655 2491 2406 2539 182 119 36 chr2 198535642 198536278 -52151576 + LTR8 LTR ERV1 2 690 -1 25 0 0 0 chr2 198536333 198536358 -52151496 + AT_rich Low_complexity Low_complexity 1 25 0 1557 195 33 59 chr2 198536551 198536940 -52150914 - MLT1B LTR MaLR -11 379 1 1451 233 104 11 chr2 198536960 198537334 -52150520 - MLT1B-int LTR MaLR -13 1722 1314 430 223 0 45 chr2 198537524 198537636 -52150218 - MLT1B-int LTR MaLR -982 753 647 * 2120 195 14 174 chr2 198537611 198538536 -52149318 - MLT1B-int LTR MaLR -488 883 1 1371 219 43 48 chr2 198538536 198538928 -52148926 - MLT1B LTR MaLR 0 390 1 657 252 84 55 chr2 198539417 198539655 -52148199 + MIR SINE MIR 18 262 0 226 60 80 0 chr2 198540172 198540222 -52147632 + L1MA4A LINE L1 6245 6298 -5 22 0 0 0 chr2 198540951 198540973 -52146881 + AT_rich Low_complexity Low_complexity 1 22 0 297 290 103 0 chr2 198541075 198541182 -52146672 - MIR SINE MIR -62 200 83 824 202 194 39 chr2 198541298 198541556 -52146298 - AluSg SINE Alu 0 300 3 3346 216 123 12 chr2 198541664 198543414 -52144440 - L1MB8 LINE L1 -12 6166 4231 1462 247 6 14 chr2 198543423 198543783 -52144071 - MER4D LTR ERV1 0 903 547 1418 213 28 0 chr2 198543816 198544102 -52143752 - MER49 LTR ERV1 -629 294 1 2699 207 6 76 chr2 198544311 198544967 -52142887 + LTR9 LTR ERV1 3 612 0 10019 177 34 43 chr2 198545001 198547098 -52140756 + HUERS-P3b LTR ERV1 25 2102 -5316 3470 101 10 66 chr2 198547171 198547748 -52140106 + HUERS-P3b LTR ERV1 2098 2642 -4776 2300 193 38 2 chr2 198547748 198548174 -52139680 - LTR8 LTR ERV1 -250 441 1 22537 154 28 46 chr2 198548174 198552594 -52135260 + HUERS-P3b LTR ERV1 3073 7413 -5 2794 205 13 35 chr2 198552595 198553219 -52134635 + LTR9 LTR ERV1 3 612 0 241 301 109 19 chr2 198553295 198553451 -52134403 + MLT1J2 LTR MaLR 264 433 -17 3047 172 46 13 chr2 198553451 198554063 -52133791 + LTR27 LTR ERV1 5 636 0 1184 134 139 0 chr2 198554113 198554213 -52133641 - MER30 DNA MER1_type 0 230 145 234 62 0 0 chr2 198554213 198554245 -52133609 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1184 134 139 0 chr2 198554245 198554346 -52133508 - MER30 DNA MER1_type -85 145 1 692 266 9 22 chr2 198554408 198554637 -52133217 - L1M4 LINE L1 -5009 1533 1308 667 69 10 10 chr2 198554641 198554742 -52133112 - AluYb8 SINE Alu -6 312 212 290 312 6 29 chr2 198555434 198555607 -52132247 - L1M4 LINE L1 -5066 1476 1308 889 20 0 0 chr2 198555611 198555713 -52132141 - AluYb8 SINE Alu -6 312 211 1901 226 28 70 chr2 198555716 198555856 -52131998 - L1M4 LINE L1 -5238 1304 1160 560 227 23 8 chr2 198555856 198555984 -52131870 + FLAM_A SINE Alu 1 130 -3 1901 226 28 70 chr2 198555984 198556512 -52131342 - L1M4 LINE L1 -5382 1160 664 5083 153 14 1 chr2 198556513 198557344 -52130510 - Tigger1 DNA MER2_type 0 2418 1577 659 190 0 0 chr2 198557351 198557472 -52130382 - AluSx SINE Alu 0 310 190 1378 128 0 0 chr2 198557554 198557750 -52130104 + HUERS-P3 LTR ERV1 8720 8915 -4 991 187 16 5 chr2 198557804 198557991 -52129863 - AluSx SINE Alu -123 189 1 8038 148 35 78 chr2 198557992 198559652 -52128202 - Tigger1 DNA MER2_type -826 1592 5 637 250 43 14 chr2 198559658 198559866 -52127988 - L1M4 LINE L1 -5880 662 449 1008 222 11 88 chr2 198559899 198560251 -52127603 - L1M4 LINE L1 -6216 326 2 2140 113 19 0 chr2 198560316 198560634 -52127220 - L1PA11 LINE L1 -5 6169 5846 557 293 48 44 chr2 198560791 198561040 -52126814 - MIR SINE MIR -12 250 1 398 295 133 49 chr2 198561218 198561503 -52126351 - HAL1 LINE L1 -1041 1466 1158 24 0 0 0 chr2 198561737 198561761 -52126093 + AT_rich Low_complexity Low_complexity 1 24 0 572 193 76 35 chr2 198562116 198562261 -52125593 + LTR40a LTR ERVL 1 151 -368 745 156 0 0 chr2 198562718 198562840 -52125014 + L1P LINE L1 4751 4872 -1274 14142 29 2 3 chr2 198562940 198564938 -52122916 - L1P2 LINE L1 -472 5682 3690 11140 38 8 0 chr2 198564935 198566341 -52121513 + L1P2 LINE L1 2294 3711 -2435 * 919 271 37 3 chr2 198566341 198566636 -52121218 - MER110 LTR ERV1 -170 321 17 1909 83 0 0 chr2 198566636 198566889 -52120965 - AluY SINE Alu -8 303 51 232 275 22 33 chr2 198566889 198566946 -52120908 - MER110 LTR ERV1 -433 58 1 264 201 59 41 chr2 198566951 198567120 -52120734 + (TATAA)n Simple_repeat Simple_repeat 3 174 0 241 175 16 32 chr2 198567103 198567166 -52120688 + (TA)n Simple_repeat Simple_repeat 2 63 0 * 546 313 32 57 chr2 198568811 198569127 -52118727 - L2 LINE L2 -91 3222 2915 217 235 39 0 chr2 198569324 198569375 -52118479 + L2 LINE L2 3208 3260 -12 507 149 0 0 chr2 198569477 198569571 -52118283 - AluSg/x SINE Alu -3 309 216 279 331 94 16 chr2 198570314 198570441 -52117413 - L2 LINE L2 -1 3312 3176 1245 177 9 0 chr2 198571123 198571343 -52116511 + MER52-int LTR ERV1 6869 7090 -1 2066 156 16 19 chr2 198571356 198571779 -52116075 - MER61-int LTR ERV1 -3599 1987 1215 400 309 11 34 chr2 198571854 198572029 -52115825 + CT-rich Low_complexity Low_complexity 1 171 0 236 233 55 14 chr2 198572137 198572210 -52115644 - HsTC2 DNA Tc2 -849 1049 974 1249 241 74 72 chr2 198572313 198572858 -52114996 - MLT1E3 LTR MaLR 0 624 45 321 293 42 36 chr2 198573221 198573388 -52114466 - MLT1L LTR MaLR -330 285 118 1908 171 24 21 chr2 198573484 198573859 -52113995 + MLT1B LTR MaLR 9 384 -6 513 327 174 12 chr2 198574857 198575400 -52112454 - L2 LINE L2 0 3313 2682 328 208 28 21 chr2 198576490 198576634 -52111220 + (CAAA)n Simple_repeat Simple_repeat 4 148 0 275 209 37 22 chr2 198576618 198576752 -52111102 + (CCAA)n Simple_repeat Simple_repeat 1 136 0 * 276 60 48 48 chr2 198576754 198576837 -52111017 + (CACAA)n Simple_repeat Simple_repeat 2 84 0 256 243 57 0 chr2 198576953 198577023 -52110831 + MIR SINE MIR 173 246 -16 360 306 106 17 chr2 198578082 198578262 -52109592 - L3b LINE CR1 -96 1487 1292 371 329 81 8 chr2 198578714 198579069 -52108785 - L1MEc LINE L1 -830 1746 1493 212 170 57 44 chr2 198579377 198579536 -52108318 + (CACAA)n Simple_repeat Simple_repeat 4 164 0 6870 42 0 2 chr2 198579692 198580566 -52107288 - L1P LINE L1 -2409 3737 2866 2468 48 6 3 chr2 198580669 198580983 -52106871 - L1PA4 LINE L1 -3 6152 5838 733 227 110 14 chr2 198581269 198581551 -52106303 + LTR37B LTR ERV1 125 464 -4 297 286 59 25 chr2 198581553 198581672 -52106182 - L2 LINE L2 -8 3305 3183 569 246 50 42 chr2 198582378 198582618 -52105236 - L1MC5 LINE L1 -71 7890 7649 303 219 48 29 chr2 198582656 198582761 -52105093 - L1MC5 LINE L1 -405 7556 7450 457 185 0 12 chr2 198582768 198582849 -52105005 - MER81 DNA DNA -5 109 30 584 180 55 8 chr2 198582852 198582980 -52104874 - L1MC5 LINE L1 -514 7447 7314 359 144 14 68 chr2 198583174 198583320 -52104534 + A-rich Low_complexity Low_complexity 3 140 0 22 0 0 0 chr2 198584287 198584309 -52103545 + AT_rich Low_complexity Low_complexity 1 22 0 225 174 38 53 chr2 198585029 198585161 -52102693 + (TTGTG)n Simple_repeat Simple_repeat 5 134 0 185 0 40 0 chr2 198585170 198585195 -52102659 + (TG)n Simple_repeat Simple_repeat 1 26 0 233 172 32 32 chr2 198585252 198585345 -52102509 + (TGG)n Simple_repeat Simple_repeat 3 95 0 4233 215 14 18 chr2 198585376 198586440 -52101414 - L1 LINE L1 -1817 4329 3270 624 270 86 6 chr2 198586824 198586998 -52100856 - LTR40a LTR ERVL -329 190 3 331 270 183 8 chr2 198587000 198587126 -52100728 + MIR SINE MIR 88 235 -27 187 337 148 0 chr2 198587274 198587425 -52100429 - MIR SINE MIR -8 200 19 28 0 0 0 chr2 198588854 198588882 -52098972 + AT_rich Low_complexity Low_complexity 1 28 0 1107 247 112 42 chr2 198589981 198590660 -52097194 - L2 LINE L2 -8 3305 2573 592 146 15 37 chr2 198590812 198590978 -52096876 + L1MB7 LINE L1 5662 5822 -352 * 2800 201 39 18 chr2 198590974 198591773 -52096081 + L1 LINE L1 2426 3241 -2905 288 143 0 0 chr2 198591804 198591860 -52095994 + (G)n Simple_repeat Simple_repeat 1 56 0 1537 137 14 21 chr2 198591975 198592259 -52095595 + L1MB7 LINE L1 5887 6168 -16 588 343 95 15 chr2 198592385 198592796 -52095058 + LTR16B LTR ERVL 5 448 -16 313 165 154 106 chr2 198593140 198593328 -52094526 - MER112 DNA MER1_type 0 260 64 320 233 39 16 chr2 198593751 198593880 -52093974 + C-rich Low_complexity Low_complexity 3 134 0 235 123 25 68 chr2 198593888 198594050 -52093804 + (CCCA)n Simple_repeat Simple_repeat 1 155 0 3622 57 0 0 chr2 198594151 198594605 -52093249 + L1PA6 LINE L1 5700 6153 -1 722 244 12 0 chr2 198594611 198594783 -52093071 + L1 LINE L1 4826 4999 -1147 1421 132 52 8 chr2 198594783 198595031 -52092823 + L1MA5 LINE L1 6030 6291 -9 180 0 0 0 chr2 198595032 198595052 -52092802 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 5237 169 22 9 chr2 198595052 198596306 -52091548 - L1PB1 LINE L1 -10 6141 4867 1326 196 101 23 chr2 198596520 198596867 -52090987 + MLT1B LTR MaLR 1 374 -16 1314 103 134 0 chr2 198596975 198597198 -52090656 + AluSq SINE Alu 60 312 -1 354 371 54 8 chr2 198598729 198598969 -52088885 - MIR SINE MIR 0 262 12 271 283 112 44 chr2 198599801 198599852 -52088002 - L1ME3A LINE L1 -234 6330 6284 237 33 0 0 chr2 198599852 198599882 -52087972 + (TC)n Simple_repeat Simple_repeat 1 30 0 271 283 112 44 chr2 198599882 198600035 -52087819 - L1ME3A LINE L1 -280 6284 6112 76 45 0 0 chr2 198600070 198600181 -52087673 + AT_rich Low_complexity Low_complexity 1 111 0 34015 80 8 8 chr2 198600281 198605101 -52082753 + L1P2 LINE L1 640 5459 -695 1481 192 95 9 chr2 198605253 198605591 -52082263 + L1P LINE L1 4949 5315 -831 897 286 41 0 chr2 198605609 198605927 -52081927 - L1ME3A LINE L1 -1086 5454 5124 1074 268 36 42 chr2 198605929 198606478 -52081376 - L1ME3A LINE L1 -2462 4078 3533 963 175 19 0 chr2 198606539 198606699 -52081155 - FAM SINE Alu -12 163 1 2083 238 43 67 chr2 198606699 198606993 -52080861 - L1MCa LINE L1 -2995 3545 3245 1994 209 36 0 chr2 198606993 198607410 -52080444 + MSTB1 LTR MaLR 1 432 0 2083 238 43 67 chr2 198607410 198608424 -52079430 - L1MCa LINE L1 -3295 3245 2267 5562 102 17 11 chr2 198608426 198609268 -52078586 + L1PA13 LINE L1 5317 6163 0 232 250 28 0 chr2 198609736 198609808 -52078046 - L1MC4 LINE L1 -1355 6687 6614 480 345 30 22 chr2 198610734 198611001 -52076853 + MLT1J2 LTR MaLR 36 304 -146 420 256 31 97 chr2 198611122 198611513 -52076341 - L1M4 LINE L1 -1465 4681 4317 1793 272 48 58 chr2 198611515 198612383 -52075471 - L1ME3 LINE L1 -1 6161 5302 2441 298 105 38 chr2 198612396 198614883 -52072971 - L1ME3 LINE L1 -937 5209 2511 6530 69 1 3 chr2 198614883 198615742 -52072112 + L1PA6 LINE L1 5297 6153 -1 2441 298 105 38 chr2 198615742 198616050 -52071804 - L1ME3 LINE L1 -3635 2511 2225 355 243 51 66 chr2 198616475 198616741 -52071113 - L1MCa LINE L1 -4572 1968 1781 467 200 46 1 chr2 198616752 198616886 -52070968 - L1MA8 LINE L1 -1 6311 6164 914 133 92 36 chr2 198616897 198617093 -52070761 + L1M2 LINE L1 5261 5467 -824 215 122 20 0 chr2 198617096 198617145 -52070709 + (TA)n Simple_repeat Simple_repeat 2 51 0 378 294 113 35 chr2 198617240 198617471 -52070383 - L1MCa LINE L1 -4788 1752 1504 595 165 0 142 chr2 198617737 198617913 -52069941 - AluSg/x SINE Alu -25 287 137 38 0 0 0 chr2 198618467 198618505 -52069349 + AT_rich Low_complexity Low_complexity 1 38 0 2389 60 0 17 chr2 198618581 198618882 -52068972 - AluY SINE Alu -15 296 1 25 65 0 0 chr2 198621121 198621167 -52066687 + AT_rich Low_complexity Low_complexity 1 46 0 3306 166 21 12 chr2 198621334 198621997 -52065857 + L1 LINE L1 3416 4084 -2062 * 4825 156 58 16 chr2 198621995 198622024 -52065830 + L1PA16 LINE L1 4759 4785 -1381 3336 131 2 29 chr2 198622024 198622581 -52065273 + L1PA15 LINE L1 5624 6165 0 4825 156 58 16 chr2 198622581 198623894 -52063960 + L1PA16 LINE L1 4785 6157 -9 856 192 14 29 chr2 198623950 198624158 -52063696 + L1 LINE L1 4080 4284 -1862 1140 176 9 4 chr2 198624164 198624391 -52063463 + L1P LINE L1 374 601 -5545 272 184 75 0 chr2 198624629 198624776 -52063078 + (TA)n Simple_repeat Simple_repeat 1 158 0 550 285 121 22 chr2 198624881 198625246 -52062608 - L1ME LINE L1 -515 5655 5255 207 139 0 0 chr2 198625373 198625409 -52062445 + (A)n Simple_repeat Simple_repeat 1 36 0 200 292 45 0 chr2 198625526 198625615 -52062239 + (TA)n Simple_repeat Simple_repeat 2 94 0 23 78 0 0 chr2 198625868 198625919 -52061935 + AT_rich Low_complexity Low_complexity 1 51 0 3601 220 118 81 chr2 198626779 198627442 -52060412 + L1MC3 LINE L1 6152 6789 -996 345 47 0 0 chr2 198627442 198627485 -52060369 + (CA)n Simple_repeat Simple_repeat 2 44 0 3601 220 118 81 chr2 198627485 198627724 -52060130 + L1MC3 LINE L1 6789 7018 -767 314 303 11 0 chr2 198627724 198627813 -52060041 + MLT1F1 LTR MaLR 35 124 -443 3601 220 118 81 chr2 198627813 198628396 -52059458 + L1MC3 LINE L1 7018 7785 0 36 0 0 0 chr2 198632342 198632378 -52055476 + AT_rich Low_complexity Low_complexity 1 36 0 1580 197 0 27 chr2 198632482 198632782 -52055072 - 7SLRNA srpRNA srpRNA -17 303 12 2045 234 90 28 chr2 198632848 198633352 -52054502 + MLT1E1 LTR MaLR 43 590 -64 2185 78 0 3 chr2 198633352 198633691 -52054163 - AluY SINE Alu 0 338 1 2045 234 90 28 chr2 198633691 198633761 -52054093 + MLT1E1 LTR MaLR 590 654 0 1601 291 50 12 chr2 198634014 198634512 -52053342 - LTR40a LTR ERVL -2 517 1 1847 105 0 0 chr2 198635252 198635499 -52052355 - AluSg SINE Alu -63 247 1 334 191 27 45 chr2 198636054 198636164 -52051690 + LTR41 LTR ERVL 651 758 -15 627 286 61 19 chr2 198636344 198636771 -52051083 - Charlie2 DNA MER1_type -184 2678 2234 276 320 118 22 chr2 198636984 198637212 -52050642 - MIR SINE MIR 0 262 13 218 290 15 76 chr2 198637420 198637551 -52050303 + L2 LINE L2 3116 3238 -75 207 0 0 0 chr2 198638189 198638212 -52049642 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1630 133 73 3 chr2 198638326 198638612 -52049242 + AluSx SINE Alu 1 306 -6 213 226 32 16 chr2 198638665 198638727 -52049127 + A-rich Low_complexity Low_complexity 2 64 0 23 33 0 0 chr2 198639155 198639185 -52048669 + AT_rich Low_complexity Low_complexity 1 30 0 2066 121 3 16 chr2 198639808 198640114 -52047740 - AluY SINE Alu -9 302 1 2944 238 36 39 chr2 198640224 198641116 -52046738 - MER63C DNA MER1_type 0 930 42 942 239 18 9 chr2 198641628 198641846 -52046008 - MER58A DNA MER1_type -2 222 3 462 281 14 7 chr2 198642352 198642498 -52045356 + L1MCa LINE L1 36 182 -6244 1069 200 143 32 chr2 198642500 198642815 -52045039 + MLT1C LTR MaLR 1 350 -117 1514 124 14 0 chr2 198643058 198643276 -52044578 - AluSg/x SINE Alu -9 301 81 782 196 13 20 chr2 198645700 198645853 -52042001 - MLT1D LTR MaLR -353 152 1 34 0 0 0 chr2 198646037 198646071 -52041783 + AT_rich Low_complexity Low_complexity 1 34 0 30 45 0 0 chr2 198647481 198647525 -52040329 + AT_rich Low_complexity Low_complexity 1 44 0 262 318 24 0 chr2 198647684 198647769 -52040085 + L2 LINE L2 3225 3311 -2 1046 316 144 13 chr2 198648367 198648838 -52039016 + L3 LINE CR1 1044 1576 -1 26 50 0 0 chr2 198649293 198649333 -52038521 + AT_rich Low_complexity Low_complexity 1 40 0 182 278 139 7 chr2 198649513 198649657 -52038197 - L2 LINE L2 -38 3275 3113 455 315 117 40 chr2 198649909 198650388 -52037466 - L2 LINE L2 -1635 1679 1164 249 211 0 0 chr2 198650616 198650673 -52037181 - L1MD3 LINE L1 -10 7985 7929 33 25 0 0 chr2 198651357 198651397 -52036457 + AT_rich Low_complexity Low_complexity 1 40 0 2549 249 50 25 chr2 198651398 198651860 -52035994 + L1ME1 LINE L1 4390 4839 -1327 2147 121 7 0 chr2 198651860 198652165 -52035689 - AluSg SINE Alu -3 307 1 2549 249 50 25 chr2 198652165 198652758 -52035096 + L1ME1 LINE L1 4839 5495 -671 327 85 0 0 chr2 198652758 198652805 -52035049 + (CA)n Simple_repeat Simple_repeat 2 48 0 2549 249 50 25 chr2 198652805 198653297 -52034557 + L1ME1 LINE L1 5495 5974 -192 756 234 50 54 chr2 198653311 198653533 -52034321 - MLT1E LTR MaLR -364 229 9 24 77 0 0 chr2 198653831 198653883 -52033971 + AT_rich Low_complexity Low_complexity 1 52 0 1629 121 7 14 chr2 198653923 198654203 -52033651 + L1MA1 LINE L1 6025 6302 0 36 40 0 0 chr2 198654203 198654253 -52033601 + AT_rich Low_complexity Low_complexity 1 50 0 1564 219 40 9 chr2 198654436 198654783 -52033071 - MLT1A1 LTR MaLR -4 361 4 212 250 25 38 chr2 198656799 198656879 -52030975 + GA-rich Low_complexity Low_complexity 4 82 0 33 18 0 36 chr2 198657431 198657453 -52030401 + AT_rich Low_complexity Low_complexity 1 22 -31 2307 89 3 0 chr2 198657453 198657744 -52030110 + AluSx SINE Alu 3 294 -18 33 18 0 36 chr2 198657744 198657776 -52030078 + AT_rich Low_complexity Low_complexity 22 53 0 466 313 64 9 chr2 198657890 198658123 -52029731 + MLT1H LTR MaLR 1 246 -303 1258 317 77 19 chr2 198658759 198659988 -52027866 + L1M4 LINE L1 2645 3945 -2201 22 56 0 0 chr2 198660332 198660368 -52027486 + AT_rich Low_complexity Low_complexity 1 36 0 450 0 0 0 chr2 198662223 198662273 -52025581 + (TC)n Simple_repeat Simple_repeat 1 50 0 195 69 0 0 chr2 198662304 198662333 -52025521 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 27 29 0 0 chr2 198662429 198662463 -52025391 + AT_rich Low_complexity Low_complexity 1 34 0 1361 151 64 0 chr2 198662854 198663105 -52024749 - L1MA5A LINE L1 0 6297 6031 355 174 23 0 chr2 198663164 198663250 -52024604 + (TA)n Simple_repeat Simple_repeat 2 89 0 887 177 25 27 chr2 198663473 198663807 -52024047 - MER82 DNA MER2_type -188 465 69 1262 201 47 61 chr2 198663807 198664197 -52023657 - MLT1A2 LTR MaLR 0 467 4 268 235 15 0 chr2 198664200 198664268 -52023586 - MER82 DNA MER2_type -580 73 5 28 0 0 0 chr2 198664443 198664471 -52023383 + AT_rich Low_complexity Low_complexity 1 28 0 893 335 36 3 chr2 198665861 198666219 -52021635 + LTR16C LTR ERVL 89 458 -33 3546 17 0 1 chr2 198666457 198666955 -52020899 - L1P1 LINE L1 -493 5662 5166 755 40 0 20 chr2 198666955 198667046 -52020808 + L1PA2 LINE L1 6055 6153 -2 377 352 104 20 chr2 198667840 198668138 -52019716 + ERVL LTR ERVL 1347 1669 -4095 329 261 85 39 chr2 198668318 198668448 -52019406 + L1MC/D LINE L1 3240 3375 -2771 225 305 53 0 chr2 198669190 198669285 -52018569 + L1MC/D LINE L1 5555 5654 -508 767 301 126 69 chr2 198669305 198669828 -52018026 - MLT2F LTR ERVL 0 663 97 2659 100 3 13 chr2 198669828 198670207 -52017647 + THE1C LTR MaLR 1 375 0 767 301 126 69 chr2 198670207 198670310 -52017544 - MLT2F LTR ERVL -566 97 1 263 282 26 17 chr2 198670573 198670690 -52017164 + LTR67 LTR ERVL 439 556 -1 327 231 116 0 chr2 198670696 198670817 -52017037 + L1MC/D LINE L1 5665 5799 -2009 25 65 0 0 chr2 198671583 198671629 -52016225 + AT_rich Low_complexity Low_complexity 1 46 0 3183 128 17 49 chr2 198672233 198672762 -52015092 + MER1A DNA MER1_type 17 528 -1 192 393 69 21 chr2 198672838 198672983 -52014871 + L2 LINE L2 2953 3104 -168 3888 69 2 6 chr2 198673626 198674146 -52013708 + L1PA8 LINE L1 5654 6171 -1 21 0 0 0 chr2 198674246 198674267 -52013587 + AT_rich Low_complexity Low_complexity 1 21 0 204 385 0 0 chr2 198675170 198675248 -52012606 + L2 LINE L2 2927 3004 -268 795 151 102 12 chr2 198675249 198675415 -52012439 + L1M2 LINE L1 5299 5479 -812 1121 108 5 112 chr2 198675415 198675629 -52012225 + AluSg/x SINE Alu 112 302 -10 437 212 93 0 chr2 198675629 198675747 -52012107 + L1MA8 LINE L1 6163 6291 0 694 218 55 40 chr2 198676716 198676918 -52010936 + MER3 DNA MER1_type 1 205 -4 805 60 56 8 chr2 198677267 198678154 -52009700 + (TA)n Simple_repeat Simple_repeat 1 930 0 27 116 0 0 chr2 198678509 198678655 -52009199 + AT_rich Low_complexity Low_complexity 1 146 0 3491 117 28 2 chr2 198680075 198680612 -52007242 - MER41A LTR ERV1 -3 551 1 237 303 92 13 chr2 198681468 198681544 -52006310 - MER5B DNA MER1_type -76 102 21 315 336 55 51 chr2 198682320 198682555 -52005299 - L2 LINE L2 -214 3058 2823 236 354 62 21 chr2 198682818 198683010 -52004844 - L2 LINE L2 -943 2371 2172 195 297 44 55 chr2 198683194 198683285 -52004569 - L2 LINE L2 -991 2323 2234 244 196 0 0 chr2 198684197 198684243 -52003611 + MIR SINE MIR 212 257 -5 2417 215 68 38 chr2 198684605 198685238 -52002616 + MER82 DNA MER2_type 2 653 0 189 268 36 0 chr2 198685724 198685780 -52002074 - MIR SINE MIR -69 139 82 1895 166 0 3 chr2 198685802 198686103 -52001751 + AluSx SINE Alu 1 300 -12 1358 218 7 31 chr2 198687011 198687332 -52000522 + AluJo SINE Alu 1 314 0 217 327 50 40 chr2 198688193 198688294 -51999560 + L2 LINE L2 1401 1502 -1812 366 294 35 14 chr2 198688542 198688685 -51999169 + MLT1E3 LTR MaLR 356 501 -123 664 158 158 0 chr2 198688706 198688845 -51999009 + MLT1E LTR MaLR 433 593 0 191 178 41 14 chr2 198688964 198689037 -51998817 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 2120 125 3 0 chr2 198689062 198689427 -51998427 + AluSp SINE Alu 1 366 0 342 370 22 0 chr2 198689849 198689987 -51997867 + MIR SINE MIR 22 162 -100 256 200 50 0 chr2 198690775 198690835 -51997019 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 1122 201 62 5 chr2 198691378 198691587 -51996267 + Tigger5 DNA MER2_type 1 221 -2102 * 2350 190 29 12 chr2 198691584 198692064 -51995790 + Tigger5 DNA MER2_type 1835 2322 -1 265 203 0 16 chr2 198692251 198692315 -51995539 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 2243 68 0 4 chr2 198693771 198694085 -51993769 - AluY SINE Alu 0 313 1 603 186 13 21 chr2 198694188 198694423 -51993431 + L1MC2 LINE L1 5932 6320 -24 392 220 202 0 chr2 198694665 198694774 -51993080 + MER50 LTR ERV1 1 131 -603 2907 106 72 12 chr2 198694774 198695257 -51992597 + L1PB2 LINE L1 5636 6147 -4 22 0 0 0 chr2 198695259 198695281 -51992573 + AT_rich Low_complexity Low_complexity 1 22 0 1421 237 179 37 chr2 198695311 198695830 -51992024 + MER50 LTR ERV1 119 711 -23 1182 146 24 5 chr2 198696054 198696260 -51991594 + L1MC2 LINE L1 5955 6164 -180 192 352 29 29 chr2 198696986 198697091 -51990763 - MER5A DNA MER1_type -49 140 36 277 210 0 0 chr2 198697286 198697348 -51990506 - L1PA13 LINE L1 -19 6144 6083 21 71 0 0 chr2 198697956 198697998 -51989856 + AT_rich Low_complexity Low_complexity 1 42 0 284 238 0 10 chr2 198698152 198698253 -51989601 + (TA)n Simple_repeat Simple_repeat 2 101 0 229 289 200 11 chr2 198698793 198698883 -51988971 - MIR SINE MIR -100 162 56 1051 174 33 0 chr2 198699820 198700004 -51987850 + MER20 DNA MER1_type 30 219 0 29 60 0 0 chr2 198700106 198700156 -51987698 + AT_rich Low_complexity Low_complexity 1 50 0 420 20 0 0 chr2 198700352 198700429 -51987425 + (GA)n Simple_repeat Simple_repeat 1 126 0 420 20 0 0 chr2 198700429 198700478 -51987376 + (GA)n Simple_repeat Simple_repeat 1 49 0 520 304 12 23 chr2 198700488 198700659 -51987195 + MIR SINE MIR 20 188 -74 428 62 0 15 chr2 198700996 198701061 -51986793 + (TA)n Simple_repeat Simple_repeat 2 65 0 300 143 0 0 chr2 198703805 198703847 -51984007 + 5S rRNA rRNA 1 42 -79 2623 87 45 0 chr2 198704071 198704451 -51983403 + L1PA13 LINE L1 5767 6163 0 22 0 0 0 chr2 198704961 198704983 -51982871 + AT_rich Low_complexity Low_complexity 1 22 0 303 179 41 16 chr2 198705490 198705613 -51982241 + (TA)n Simple_repeat Simple_repeat 1 126 0 2544 92 11 0 chr2 198706436 198706793 -51981061 - L1PA7 LINE L1 -1 6153 5793 2294 59 7 0 chr2 198706793 198707081 -51980773 + L1PA7 LINE L1 5505 5794 -360 2523 59 0 0 chr2 198707088 198707394 -51980460 - AluY SINE Alu -5 306 1 21 0 0 0 chr2 198707932 198707953 -51979901 + AT_rich Low_complexity Low_complexity 1 21 0 448 312 121 42 chr2 198707957 198708270 -51979584 - ERVL LTR ERVL -609 5155 4801 1701 132 0 8 chr2 198708270 198708521 -51979333 + AluSq SINE Alu 4 252 -61 448 312 121 42 chr2 198708521 198708611 -51979243 - ERVL LTR ERVL -963 4801 4720 4251 92 5 0 chr2 198708802 198709419 -51978435 - L1P LINE L1 -961 5185 4566 3268 74 2 0 chr2 198709419 198709852 -51978002 + L1PA7 LINE L1 5707 6141 -13 607 343 54 29 chr2 198710030 198710584 -51977270 - ERVL LTR ERVL -1272 4213 3646 28 29 0 0 chr2 198710640 198710675 -51977179 + AT_rich Low_complexity Low_complexity 1 35 0 1190 219 24 94 chr2 198710877 198711251 -51976603 + MLT1A1 LTR MaLR 1 348 -17 1477 293 91 19 chr2 198711365 198712240 -51975614 + L1 LINE L1 3192 4129 -2017 7638 192 44 92 chr2 198712255 198712824 -51975030 + L1MC3 LINE L1 5572 6166 -1619 2075 203 56 61 chr2 198712824 198713381 -51974473 + MLT2B3 LTR ERVL 1 554 0 7638 192 44 92 chr2 198713381 198714567 -51973287 + L1MC3 LINE L1 6166 7193 -592 188 67 33 0 chr2 198714567 198714597 -51973257 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 7638 192 44 92 chr2 198714597 198715164 -51972690 + L1MC3 LINE L1 7193 7785 0 21 0 0 0 chr2 198716474 198716495 -51971359 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 198717645 198717684 -51970170 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 198717711 198717749 -51970105 + AT_rich Low_complexity Low_complexity 1 38 0 31 44 0 0 chr2 198717886 198717931 -51969923 + AT_rich Low_complexity Low_complexity 1 45 0 286 279 29 19 chr2 198718675 198718779 -51969075 + MIR SINE MIR 86 190 -72 322 347 51 0 chr2 198718795 198718893 -51968961 + L2 LINE L2 3158 3260 -12 193 29 59 0 chr2 198721515 198721549 -51966305 + (TA)n Simple_repeat Simple_repeat 1 36 0 25 0 0 0 chr2 198721634 198721659 -51966195 + AT_rich Low_complexity Low_complexity 1 25 0 357 306 88 27 chr2 198722607 198722754 -51965100 + MIR SINE MIR 59 214 -48 2716 7 0 0 chr2 198724769 198725069 -51962785 + AluYa5 SINE Alu 1 300 -11 598 341 70 7 chr2 198725221 198725508 -51962346 + MER102b DNA MER1_type 37 341 0 1685 90 4 0 chr2 198725852 198726086 -51961768 + L1PA11 LINE L1 5934 6168 -6 317 109 0 0 chr2 198726881 198726927 -51960927 - LTR9B LTR ERV1 -210 434 389 448 290 39 26 chr2 198726970 198727125 -51960729 + MIR SINE MIR 106 262 0 378 0 0 0 chr2 198728277 198728319 -51959535 + (TG)n Simple_repeat Simple_repeat 2 43 0 352 321 86 43 chr2 198731498 198731685 -51956169 - MIR3 SINE MIR -10 198 4 359 259 72 56 chr2 198731822 198732073 -51955781 + L1MC5 LINE L1 7393 7647 -314 22 0 0 0 chr2 198732215 198732237 -51955617 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 198732819 198732847 -51955007 + AT_rich Low_complexity Low_complexity 1 28 0 327 220 83 68 chr2 198733683 198733815 -51954039 + MER5B DNA MER1_type 33 166 -12 345 261 133 21 chr2 198733828 198733948 -51953906 - MER5A DNA MER1_type -6 183 27 476 339 68 9 chr2 198735764 198735985 -51951869 - MIR SINE MIR -26 236 3 2125 107 0 0 chr2 198736174 198736496 -51951358 - AluY SINE Alu 0 323 2 36 0 0 0 chr2 198736522 198736558 -51951296 + AT_rich Low_complexity Low_complexity 1 36 0 1272 206 126 61 chr2 198736795 198737105 -51950749 + LTR48 LTR ERV1 4 223 -319 2046 120 3 17 chr2 198737105 198737406 -51950448 - AluSx SINE Alu -15 297 1 1272 206 126 61 chr2 198737406 198737748 -51950106 + LTR48 LTR ERV1 223 542 0 2771 162 34 30 chr2 198738584 198739141 -51948713 - MER89 LTR ERV1 0 559 1 1056 190 70 25 chr2 198742010 198742326 -51945528 - L1MCa LINE L1 -3123 3303 2974 329 261 11 11 chr2 198742379 198742471 -51945383 + L1M4 LINE L1 4676 4767 -1379 318 292 22 0 chr2 198742471 198742560 -51945294 - MER20 DNA MER1_type -128 91 1 1440 215 110 28 chr2 198742996 198743387 -51944467 + MLT1D LTR MaLR 1 423 -82 423 154 0 0 chr2 198743386 198743451 -51944403 - HSMAR2 DNA Mariner -960 342 278 * 9494 179 7 6 chr2 198743457 198746321 -51941533 - L1PB1 LINE L1 -8 6143 3279 5779 133 19 23 chr2 198746321 198747269 -51940585 + HSMAR2 DNA Mariner 358 1301 -1 448 139 70 0 chr2 198747317 198747403 -51940451 + MLT1D LTR MaLR 412 503 -2 237 235 151 49 chr2 198747614 198747806 -51940048 - L1MCa LINE L1 -861 1926 1479 592 278 70 0 chr2 198748209 198748468 -51939386 - L1MCa LINE L1 -2885 3541 3265 1805 297 55 29 chr2 198748480 198749264 -51938590 - L1MCa LINE L1 -5409 1198 395 1044 209 175 3 chr2 198750174 198750466 -51937388 + MER2 DNA MER2_type 2 343 -1 5813 126 16 15 chr2 198750836 198751772 -51936082 + L1MA3 LINE L1 5369 6305 0 248 170 19 0 chr2 198752702 198752755 -51935099 - L1MCa LINE L1 -4362 2064 2011 270 281 8 31 chr2 198753293 198753412 -51934442 + MIR SINE MIR 15 225 -37 573 254 8 0 chr2 198755020 198755150 -51932704 - MER94 DNA DNA 0 134 4 1573 276 101 9 chr2 198756437 198757010 -51930844 + MLT1E2 LTR MaLR 1 626 0 24 67 0 0 chr2 198757583 198757628 -51930226 + AT_rich Low_complexity Low_complexity 1 45 0 26 50 0 0 chr2 198758214 198758254 -51929600 + AT_rich Low_complexity Low_complexity 1 40 0 970 223 15 0 chr2 198758325 198758531 -51929323 - MER3 DNA MER1_type 0 209 1 34 0 0 0 chr2 198760061 198760095 -51927759 + AT_rich Low_complexity Low_complexity 1 34 0 2299 75 0 29 chr2 198760457 198760764 -51927090 - AluY SINE Alu -3 308 11 6364 88 17 2 chr2 198761059 198762335 -51925519 - L1PA7 LINE L1 0 6154 4869 480 267 40 104 chr2 198762498 198762824 -51925030 - L2 LINE L2 -8 3305 3001 3178 133 74 0 chr2 198763086 198763599 -51924255 - MER41C LTR ERV1 0 554 4 233 219 92 67 chr2 198763746 198763865 -51923989 - L2 LINE L2 -2 3311 3190 22 0 0 0 chr2 198764162 198764184 -51923670 + AT_rich Low_complexity Low_complexity 1 22 0 289 248 89 38 chr2 198764474 198764631 -51923223 + L1 LINE L1 3623 3787 -2359 662 275 98 4 chr2 198764767 198765003 -51922851 - MIR SINE MIR -3 259 2 22 35 0 0 chr2 198765024 198765053 -51922801 + AT_rich Low_complexity Low_complexity 1 29 0 40 21 0 0 chr2 198765155 198765202 -51922652 + AT_rich Low_complexity Low_complexity 1 47 0 2539 99 6 0 chr2 198765221 198765576 -51922278 - L1PA13 LINE L1 -11 6152 5796 183 42 0 0 chr2 198766032 198766056 -51921798 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr2 198766342 198766363 -51921491 + AT_rich Low_complexity Low_complexity 1 21 0 1758 21 0 99 chr2 198766869 198767112 -51920742 - AluY SINE Alu -20 291 73 386 289 95 91 chr2 198768507 198768749 -51919105 - MIR SINE MIR -3 259 17 240 355 132 16 chr2 198769706 198769957 -51917897 + L2 LINE L2 1819 2098 -1216 2004 123 5 93 chr2 198769957 198770356 -51917498 + THE1B LTR MaLR 1 364 0 9967 122 22 28 chr2 198770356 198771945 -51915909 + THE1B-int LTR MaLR 1 1580 0 2555 116 3 3 chr2 198771946 198772307 -51915547 + THE1B LTR MaLR 2 362 -2 361 305 26 111 chr2 198772509 198772889 -51914965 + L2 LINE L2 2186 2533 -781 4169 211 56 15 chr2 198773153 198774684 -51913170 - L1MD1 LINE L1 0 6636 5050 280 229 39 57 chr2 198774690 198774836 -51913018 - L1MD1 LINE L1 -4963 1577 1431 333 221 0 70 chr2 198774836 198774922 -51912932 - Tigger4(Zombi) DNA MER2_type 0 2731 2652 325 179 0 0 chr2 198774902 198774958 -51912896 - Tigger4(Zombi) DNA MER2_type -2674 57 2 * 3579 238 147 47 chr2 198774959 198776208 -51911646 - L1MD1 LINE L1 -5108 1432 59 242 270 135 0 chr2 198776333 198776422 -51911432 - MIR SINE MIR -114 148 48 329 304 64 82 chr2 198776499 198776719 -51911135 + MIR SINE MIR 31 246 -16 356 265 10 0 chr2 198777277 198777375 -51910479 + MER99 DNA DNA 2 100 -728 1851 260 64 18 chr2 198777396 198777993 -51909861 + MER99 DNA DNA 202 825 -3 27 29 0 0 chr2 198778105 198778139 -51909715 + AT_rich Low_complexity Low_complexity 1 34 0 17514 55 2 2 chr2 198778510 198781515 -51906339 - L1PA5 LINE L1 -3 6151 3146 250 56 0 0 chr2 198781515 198781551 -51906303 - L1PA5 LINE L1 -3278 2868 2833 180 238 0 24 chr2 198782178 198782220 -51905634 - L2 LINE L2 -250 3063 3023 198 0 0 0 chr2 198782353 198782375 -51905479 + (T)n Simple_repeat Simple_repeat 1 22 0 23 0 0 0 chr2 198782492 198782515 -51905339 + AT_rich Low_complexity Low_complexity 1 23 0 23441 38 0 9 chr2 198782515 198786162 -51901692 + L1PA4 LINE L1 2517 6159 0 1753 169 3 14 chr2 198788564 198788880 -51898974 - AluSx SINE Alu 0 313 1 25 0 0 0 chr2 198788880 198788905 -51898949 + AT_rich Low_complexity Low_complexity 1 25 0 280 269 13 0 chr2 198788905 198788983 -51898871 - L2 LINE L2 -8 3305 3227 1183 136 114 61 chr2 198789002 198789266 -51898588 - L1MA7 LINE L1 -25 6266 5989 276 260 125 10 chr2 198790247 198790343 -51897511 - MIR SINE MIR 0 262 156 1868 138 58 25 chr2 198790401 198790762 -51897092 - THE1C LTR MaLR -2 373 1 23 78 0 0 chr2 198790905 198790956 -51896898 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr2 198794491 198794512 -51893342 + AT_rich Low_complexity Low_complexity 1 21 0 306 106 0 0 chr2 198794554 198794601 -51893253 + (TG)n Simple_repeat Simple_repeat 2 48 0 2153 116 0 3 chr2 198795604 198795907 -51891947 - AluSx SINE Alu -10 302 1 21 0 0 0 chr2 198797166 198797187 -51890667 + AT_rich Low_complexity Low_complexity 1 21 0 453 76 0 0 chr2 198797275 198797341 -51890513 + (TA)n Simple_repeat Simple_repeat 2 67 0 335 169 0 0 chr2 198799545 198799604 -51888250 - MER99 DNA DNA -578 250 192 36 0 0 0 chr2 198799920 198799956 -51887898 + AT_rich Low_complexity Low_complexity 1 36 0 422 270 20 0 chr2 198800235 198800335 -51887519 - MER99 DNA DNA -725 103 2 386 220 92 64 chr2 198800429 198800602 -51887252 + Charlie7 DNA MER1_type 348 525 -2087 1849 262 69 25 chr2 198801005 198801688 -51886166 + HsTC2a DNA Tc2 29 741 -3 1866 175 0 3 chr2 198801690 198801999 -51885855 + AluJb SINE Alu 1 308 -4 284 333 153 9 chr2 198802010 198802238 -51885616 - MIR SINE MIR -1 261 1 325 293 60 53 chr2 198803572 198803722 -51884132 - L2 LINE L2 0 3272 3122 354 277 6 102 chr2 198805107 198805273 -51882581 - MER5B DNA MER1_type -21 157 8 199 264 33 83 chr2 198805704 198805825 -51882029 - MIR SINE MIR -27 235 121 226 279 93 21 chr2 198805848 198805988 -51881866 - L1M2 LINE L1 -664 5648 5499 39 22 0 0 chr2 198806043 198806089 -51881765 + AT_rich Low_complexity Low_complexity 1 46 0 300 243 10 29 chr2 198806089 198806192 -51881662 - L1ME LINE L1 -684 5437 5337 2435 271 49 25 chr2 198806248 198807467 -51880387 - L1ME2 LINE L1 -9 6155 4900 * 3096 222 49 63 chr2 198807465 198808481 -51879373 + L1MD1 LINE L1 5216 6229 -13 378 209 48 9 chr2 198808484 198808589 -51879265 - L1ME2 LINE L1 -1241 4905 4797 233 0 0 59 chr2 198808599 198808633 -51879221 + (TAAAAA)n Simple_repeat Simple_repeat 4 35 0 13939 31 0 4 chr2 198808654 198811156 -51876698 - L1PA3 LINE L1 0 6155 3706 2237 169 21 2 chr2 198811405 198811826 -51876028 + L1MA5 LINE L1 5866 6294 -6 418 296 132 6 chr2 198811847 198812006 -51875848 - MIR SINE MIR -71 191 13 1404 258 59 48 chr2 198814363 198814474 -51873380 + L1ME3 LINE L1 6 114 -6295 1861 107 4 0 chr2 198814474 198814718 -51873136 + AluSg SINE Alu 57 301 -9 1404 258 59 48 chr2 198814718 198815411 -51872443 + L1ME3 LINE L1 114 950 -5459 1594 190 18 21 chr2 198815418 198815745 -51872109 - L1MA7 LINE L1 -172 6119 5794 200 33 0 33 chr2 198815746 198815776 -51872078 + (TA)n Simple_repeat Simple_repeat 1 29 0 1525 228 55 28 chr2 198815782 198816431 -51871423 + L1ME3 LINE L1 938 1621 -4785 1569 203 81 189 chr2 198816432 198817411 -51870443 + LTR1B LTR ERV1 1 1020 0 981 233 23 8 chr2 198817411 198817677 -51870177 + L1ME3 LINE L1 1620 1889 -4517 3052 253 48 34 chr2 198817690 198818303 -51869551 + L1ME3 LINE L1 2494 3097 -3309 2054 124 0 0 chr2 198818303 198818639 -51869215 - AluSx SINE Alu 0 336 1 3052 253 48 34 chr2 198818639 198819361 -51868493 + L1ME3 LINE L1 3097 3849 -2557 3655 214 55 27 chr2 198819888 198820915 -51866939 - Charlie1a DNA MER1_type -311 1144 89 2105 252 86 51 chr2 198820937 198822164 -51865690 + L1ME3 LINE L1 5077 6374 -48 189 74 0 0 chr2 198822164 198822191 -51865663 + (TG)n Simple_repeat Simple_repeat 2 28 0 2105 252 86 51 chr2 198822191 198822216 -51865638 + L1ME3 LINE L1 6374 6397 -25 32 56 0 14 chr2 198822493 198822541 -51865313 + AT_rich Low_complexity Low_complexity 1 49 -21 1692 174 18 0 chr2 198822541 198822823 -51865031 - AluSx SINE Alu -25 287 1 32 56 0 14 chr2 198822823 198822845 -51865009 + AT_rich Low_complexity Low_complexity 49 70 0 414 255 113 42 chr2 198823050 198823262 -51864592 + L1MC4a LINE L1 5702 5928 -1880 2141 93 0 48 chr2 198823363 198823673 -51864181 - AluSp SINE Alu -18 295 1 13121 55 15 4 chr2 198824672 198827108 -51860746 - L1PA5 LINE L1 -3 6151 3696 423 236 94 0 chr2 198827270 198827397 -51860457 - MIR SINE MIR -86 176 38 428 224 10 10 chr2 198827487 198827585 -51860269 - MER63 DNA MER1_type -291 771 674 2223 166 24 49 chr2 198827633 198827937 -51859917 + Tigger7 DNA MER2_type 32 324 -409 2215 93 4 0 chr2 198827937 198828253 -51859601 + AluSc SINE Alu 1 317 0 2223 166 24 49 chr2 198828253 198828399 -51859455 + Tigger7 DNA MER2_type 324 472 -261 413 171 67 9 chr2 198830566 198830671 -51857183 - LTR67 LTR ERVL -21 536 426 9184 35 2 0 chr2 198830971 198832075 -51855779 - L1P LINE L1 -3148 2998 1893 214 307 34 45 chr2 198832193 198832281 -51855573 - MIR SINE MIR -98 164 78 198 339 0 0 chr2 198832502 198832561 -51855293 - L2 LINE L2 -9 3263 3205 259 296 50 36 chr2 198832795 198833015 -51854839 - L2 LINE L2 -425 2889 2667 285 253 0 0 chr2 198833630 198833713 -51854141 + A-rich Low_complexity Low_complexity 1 83 0 403 210 198 19 chr2 198833756 198833913 -51853941 + MIR SINE MIR 5 189 -73 286 326 57 7 chr2 198834023 198834164 -51853690 + L3 LINE CR1 1404 1551 -26 4146 29 4 0 chr2 198834563 198835047 -51852807 + L1PA4 LINE L1 5670 6155 0 22 0 0 0 chr2 198835050 198835072 -51852782 + AT_rich Low_complexity Low_complexity 1 22 0 1404 56 6 0 chr2 198835080 198835259 -51852595 + L1PA8 LINE L1 5993 6172 0 479 258 8 0 chr2 198835534 198835654 -51852200 - MER5A DNA MER1_type -5 184 64 833 231 68 49 chr2 198835666 198835930 -51851924 + MLT1C LTR MaLR 6 274 -193 224 352 66 11 chr2 198836591 198836773 -51851081 + L2 LINE L2 2897 3088 -184 225 270 54 14 chr2 198837415 198837489 -51850365 - L2 LINE L2 0 3272 3196 185 321 0 0 chr2 198837698 198837754 -51850100 + L2 LINE L2 3201 3256 -16 1697 192 0 6 chr2 198838189 198838502 -51849352 + AluJb SINE Alu 1 311 -1 470 255 14 21 chr2 198838613 198838758 -51849096 + L1M4 LINE L1 2969 3112 -3034 2236 127 59 0 chr2 198838781 198839104 -51848750 + LTR18A LTR ERVL 16 357 0 3771 211 7 4 chr2 198839128 198839821 -51848033 + HERVL18 LTR ERVL 791 1485 -4562 414 258 136 36 chr2 198840479 198840662 -51847192 + MIR SINE MIR 12 211 -51 874 203 109 64 chr2 198841344 198841655 -51846199 - L1ME3A LINE L1 -29 6141 5817 473 295 80 8 chr2 198841697 198841934 -51845920 + L1MC/D LINE L1 5318 5571 -2237 274 265 15 0 chr2 198841964 198842032 -51845822 + L1MC/D LINE L1 5694 5762 -2046 465 145 48 0 chr2 198842494 198842577 -51845277 - MLT1D LTR MaLR 0 505 419 511 264 23 29 chr2 198842683 198842857 -51844997 - MIR SINE MIR -89 173 1 631 294 86 30 chr2 198844445 198844806 -51843048 + L2 LINE L2 2879 3259 -54 1955 143 3 34 chr2 198844956 198845278 -51842576 + AluSx SINE Alu 1 312 0 381 260 0 0 chr2 198845722 198845799 -51842055 - MER58A DNA MER1_type -30 77 1 1314 311 67 27 chr2 198846267 198846861 -51840993 - HERVL LTR ERVL -2319 3335 2718 182 283 0 0 chr2 198847393 198847446 -51840408 + L2 LINE L2 2837 2889 -424 533 161 14 1 chr2 198847474 198847573 -51840281 + MLT1D LTR MaLR 367 505 0 2250 157 22 31 chr2 198848857 198849310 -51838544 - L1MB3 LINE L1 -3 6180 5732 979 202 72 101 chr2 198849314 198849690 -51838164 + MLT1A1 LTR MaLR 1 365 0 247 135 27 0 chr2 198849694 198849731 -51838123 + MLT1A1-int LTR MaLR 5 42 -1329 1983 220 42 53 chr2 198849759 198850231 -51837623 + MLT1A1-int LTR MaLR 469 935 -800 457 299 57 0 chr2 198850957 198851161 -51836693 - MIR SINE MIR 0 262 48 270 291 120 8 chr2 198851161 198851278 -51836576 - LTR67 LTR ERVL 0 557 428 963 126 7 0 chr2 198851885 198852020 -51835834 - AluSq/x SINE Alu -177 136 1 282 222 37 25 chr2 198853576 198853657 -51834197 - LTR10E LTR ERV1 -551 82 1 308 143 238 60 chr2 198853661 198853745 -51834109 - LTR8 LTR ERV1 -592 99 1 2214 123 3 0 chr2 198853897 198854206 -51833648 - AluSx SINE Alu 0 312 3 228 111 0 0 chr2 198854261 198854297 -51833557 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 201 220 0 51 chr2 198854313 198854372 -51833482 + MIR3 SINE MIR 15 70 -138 249 226 16 16 chr2 198854587 198854649 -51833205 + (TAG)n Simple_repeat Simple_repeat 1 62 0 1143 93 33 0 chr2 198856883 198857033 -51830821 - THE1B LTR MaLR -209 155 1 751 290 112 0 chr2 198857042 198857328 -51830526 - LTR33 LTR ERVL -201 320 3 1186 118 180 4 chr2 198858232 198858504 -51829350 - THE1C LTR MaLR 0 375 56 1226 130 14 43 chr2 198858627 198858834 -51829020 + THE1B LTR MaLR 50 250 -114 1028 129 12 35 chr2 198858819 198858990 -51828864 + THE1B LTR MaLR 198 364 0 * 1481 179 38 104 chr2 198858991 198859447 -51828407 - MLT1C LTR MaLR -19 448 18 283 333 10 10 chr2 198859484 198859580 -51828274 - MER5A DNA MER1_type -91 98 3 490 211 124 19 chr2 198859729 198859890 -51827964 + MIR SINE MIR 36 213 -49 2659 176 8 30 chr2 198860111 198860610 -51827244 - MER82 DNA MER2_type -136 517 30 227 343 19 19 chr2 198861295 198861403 -51826451 + MIR SINE MIR 33 140 -122 719 247 194 53 chr2 198865654 198866071 -51821783 + MLT1H1 LTR MaLR 78 553 -2 1202 203 27 35 chr2 198866126 198866387 -51821467 + MLT1A2 LTR MaLR 2 260 -114 367 371 27 9 chr2 198867190 198867411 -51820443 + MIR SINE MIR 3 227 -35 1028 167 0 18 chr2 198867526 198867694 -51820160 - FAM SINE Alu -15 170 6 834 274 151 30 chr2 198867724 198868056 -51819798 - MLT1K LTR MaLR -189 399 28 597 221 71 21 chr2 198868291 198868531 -51819323 + Tigger4(Zombi) DNA MER2_type 2480 2731 0 249 290 29 0 chr2 198868987 198869056 -51818798 - Charlie8 DNA MER1_type 0 2417 2347 2485 138 73 0 chr2 198869070 198869467 -51818387 + MSTB LTR MaLR 1 426 0 644 230 24 6 chr2 198869594 198869759 -51818095 + L1M4 LINE L1 2187 2354 -3792 187 200 0 0 chr2 198869880 198869925 -51817929 + MIR SINE MIR 164 208 -54 505 284 59 87 chr2 198870080 198870471 -51817383 - MLT1I LTR MaLR -2 407 28 1030 147 6 0 chr2 198871277 198871434 -51816420 - Tigger3(Golem) DNA MER2_type -1 3028 2871 198 0 0 0 chr2 198871692 198871714 -51816140 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 1686 86 9 0 chr2 198871836 198872057 -51815797 - AluY SINE Alu -6 305 83 21 0 0 0 chr2 198872225 198872246 -51815608 + AT_rich Low_complexity Low_complexity 1 21 0 321 301 77 13 chr2 198872450 198872606 -51815248 - MLT1L LTR MaLR -6 609 444 617 172 22 83 chr2 198872609 198872789 -51815065 + MER53 DNA DNA 5 173 -16 180 111 0 0 chr2 198874805 198874832 -51813022 + (A)n Simple_repeat Simple_repeat 1 27 0 350 57 19 0 chr2 198875535 198875588 -51812266 + (TG)n Simple_repeat Simple_repeat 2 55 0 1026 165 0 24 chr2 198876439 198876609 -51811245 + AluJb SINE Alu 136 301 -11 204 213 0 0 chr2 198876617 198876664 -51811190 + (TG)n Simple_repeat Simple_repeat 2 48 0 300 304 88 58 chr2 198877143 198877460 -51810394 + L2 LINE L2 2716 3039 -233 1005 81 0 0 chr2 198877729 198877853 -51810001 - AluSg/x SINE Alu -11 301 178 3683 242 74 31 chr2 198879077 198880440 -51807414 + L1M4 LINE L1 2754 4183 -1963 1975 108 29 11 chr2 198880440 198880763 -51807091 + AluSx SINE Alu 1 328 0 3683 242 74 31 chr2 198880763 198880826 -51807028 + L1M4 LINE L1 4183 4242 -1904 1671 175 7 10 chr2 198880827 198881119 -51806735 + AluJb SINE Alu 1 291 -21 203 255 0 20 chr2 198881285 198881336 -51806518 + C-rich Low_complexity Low_complexity 2 51 0 7004 154 52 8 chr2 198881436 198882618 -51805236 + THE1C-int LTR MaLR 347 1580 0 1015 193 112 23 chr2 198882618 198882877 -51804977 + THE1C LTR MaLR 1 282 -93 987 204 9 23 chr2 198882846 198883067 -51804787 + THE1C LTR MaLR 158 375 0 * 234 264 19 0 chr2 198883133 198883186 -51804668 - 7SK RNA RNA -95 98 45 318 319 0 35 chr2 198884786 198884902 -51802952 - MIR SINE MIR -95 167 56 572 193 175 48 chr2 198886493 198886721 -51801133 - MIR SINE MIR -1 261 5 938 104 7 0 chr2 198887580 198887734 -51800120 + (TA)n Simple_repeat Simple_repeat 1 155 0 1947 110 11 11 chr2 198887734 198888015 -51799839 - AluSg SINE Alu -29 281 1 1714 182 7 3 chr2 198888738 198889029 -51798825 - AluJb SINE Alu -20 292 1 202 314 0 57 chr2 198889059 198889129 -51798725 - L2 LINE L2 -1 3312 3247 424 304 38 13 chr2 198890857 198891015 -51796839 + MIR SINE MIR 86 247 -15 252 284 14 14 chr2 198891386 198891460 -51796394 + L2 LINE L2 3194 3267 -5 969 261 8 8 chr2 198891921 198892162 -51795692 - L2 LINE L2 -959 2355 2115 1675 171 37 35 chr2 198893063 198893437 -51794417 - THE1C LTR MaLR 0 375 1 425 165 13 0 chr2 198893545 198893624 -51794230 - MER67C LTR ERV1 0 710 631 2939 196 50 13 chr2 198893686 198894302 -51793552 - MER67C LTR ERV1 -71 639 1 23 0 0 0 chr2 198894317 198894340 -51793514 + AT_rich Low_complexity Low_complexity 1 23 0 1649 159 112 61 chr2 198894748 198894766 -51793088 - LTR47A LTR ERVL 0 452 436 1965 140 72 29 chr2 198894766 198895115 -51792739 - THE1B LTR MaLR 0 364 1 1649 159 112 61 chr2 198895115 198895524 -51792330 - LTR47A LTR ERVL -16 436 3 291 54 0 0 chr2 198895632 198895669 -51792185 + (TAA)n Simple_repeat Simple_repeat 2 38 0 824 276 82 50 chr2 198895682 198896120 -51791734 + LTR1B LTR ERV1 47 498 -328 232 309 14 72 chr2 198896146 198896285 -51791569 + LTR28 LTR ERV1 848 978 -42 268 349 55 32 chr2 198896599 198896817 -51791037 - L2 LINE L2 -901 2413 2191 3788 130 9 92 chr2 198896860 198897613 -51790241 + LTR8 LTR ERV1 1 691 0 26 0 0 0 chr2 198897679 198897705 -51790149 + AT_rich Low_complexity Low_complexity 1 26 0 25 51 0 0 chr2 198899053 198899092 -51788762 + AT_rich Low_complexity Low_complexity 1 39 0 381 304 37 7 chr2 198899436 198899571 -51788283 - MIR SINE MIR -73 189 51 24 53 0 0 chr2 198899876 198899914 -51787940 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 198900964 198900992 -51786862 + AT_rich Low_complexity Low_complexity 1 28 0 503 252 32 26 chr2 198901874 198902029 -51785825 + LTR67 LTR ERVL 389 544 -13 292 100 0 0 chr2 198902152 198902192 -51785662 - LTR16A LTR ERVL -17 433 394 806 256 10 24 chr2 198902193 198902503 -51785351 - LTR16A LTR ERVL -20 430 92 648 284 76 5 chr2 198902645 198902842 -51785012 + MIR SINE MIR 5 215 -47 380 279 35 0 chr2 198904147 198904299 -51783555 - MIR SINE MIR 0 262 105 204 316 116 0 chr2 198904578 198904673 -51783181 + MER5A DNA MER1_type 84 189 0 241 309 53 20 chr2 198905562 198905714 -51782140 - L1M4 LINE L1 -1305 4841 4685 1303 222 55 0 chr2 198905720 198906032 -51781822 - L1MD2 LINE L1 -24 6335 6005 891 256 60 4 chr2 198906228 198906462 -51781392 - MER90 LTR ERV1 0 575 329 313 333 20 7 chr2 198906828 198906975 -51780879 + L1MC4a LINE L1 5749 5897 -1911 1699 185 16 21 chr2 198907274 198907657 -51780197 + L1MB1 LINE L1 5785 6165 -3 381 186 168 35 chr2 198908903 198909016 -51778838 - L2 LINE L2 0 3313 3186 303 153 17 0 chr2 198910221 198910280 -51777574 - L1PA8 LINE L1 -9 6163 6104 219 188 0 0 chr2 198911018 198911066 -51776788 + (TG)n Simple_repeat Simple_repeat 1 48 0 884 217 201 16 chr2 198912397 198912641 -51775213 - AluSc SINE Alu -9 290 2 242 349 0 0 chr2 198912814 198912877 -51774977 + L2 LINE L2 3206 3268 -4 6331 178 59 98 chr2 198912914 198914741 -51773113 + MER52A LTR ERV1 1 1755 0 318 293 19 9 chr2 198916541 198916647 -51771207 + MLT1K LTR MaLR 147 253 -335 216 427 43 0 chr2 198916885 198917002 -51770852 + MER91C DNA MER1_type 1 122 -18 29 28 0 0 chr2 198917715 198917751 -51770103 + AT_rich Low_complexity Low_complexity 1 36 0 1965 107 11 11 chr2 198918610 198918891 -51768963 + AluSg SINE Alu 1 281 -29 1043 109 6 0 chr2 198918891 198919065 -51768789 + (TA)n Simple_repeat Simple_repeat 2 176 0 4282 152 66 67 chr2 198919825 198920679 -51767175 - THE1C-int LTR MaLR -727 853 1 1760 169 46 27 chr2 198920679 198921047 -51766807 - THE1C LTR MaLR 0 375 1 1979 181 20 6 chr2 198921336 198921679 -51766175 - MLT1A1 LTR MaLR 0 365 18 1209 135 0 36 chr2 198921794 198922016 -51765838 + L1PB1 LINE L1 5937 6150 -1 26 30 0 0 chr2 198922144 198922177 -51765677 + AT_rich Low_complexity Low_complexity 1 33 0 1504 229 9 16 chr2 198922792 198923229 -51764625 - L1 LINE L1 -2972 4593 4160 1814 124 4 0 chr2 198923276 198923535 -51764319 - MLT2A2 LTR ERVL -193 260 1 911 100 27 0 chr2 198923535 198923685 -51764169 - L1 LINE L1 -4343 3222 3069 * 1486 96 35 0 chr2 198923682 198923911 -51763943 + L1M1 LINE L1 2476 2712 -4853 4222 106 11 59 chr2 198923911 198924673 -51763181 - L1 LINE L1 -4408 3157 2433 384 269 66 44 chr2 198924950 198925132 -51762722 + MIR SINE MIR 6 191 -71 288 301 165 0 chr2 198925754 198925857 -51761997 - L2 LINE L2 -2 3311 3192 360 331 61 17 chr2 198926350 198926531 -51761323 - MIR SINE MIR -26 236 48 8486 185 8 10 chr2 198926609 198927441 -51760413 - L1PA15 LINE L1 -4 6161 5328 1598 187 0 20 chr2 198927441 198927746 -51760108 - AluJb SINE Alu -13 299 1 8486 185 8 10 chr2 198927746 198929434 -51758420 - L1PA15 LINE L1 -837 5328 3677 182 221 29 73 chr2 198929944 198930012 -51757842 - L2 LINE L2 -2643 671 607 398 131 0 0 chr2 198930501 198930562 -51757292 - L1PA11 LINE L1 -1 6173 6113 207 372 0 0 chr2 198930675 198930753 -51757101 + L2 LINE L2 1598 1675 -1639 524 296 130 20 chr2 198931366 198931613 -51756241 - LTR16A1 LTR ERVL -16 441 168 431 251 35 62 chr2 198931690 198931897 -51755957 + L1ME3 LINE L1 5815 6028 -136 221 246 0 29 chr2 198932164 198932233 -51755621 + CT-rich Low_complexity Low_complexity 3 69 0 189 0 0 0 chr2 198933342 198933363 -51754491 + (TG)n Simple_repeat Simple_repeat 2 22 0 282 193 0 0 chr2 198933380 198933437 -51754417 + (TATG)n Simple_repeat Simple_repeat 2 58 0 260 154 19 0 chr2 198933828 198933880 -51753974 + (TATG)n Simple_repeat Simple_repeat 2 54 0 467 17 17 0 chr2 198933912 198933972 -51753882 + (CA)n Simple_repeat Simple_repeat 2 62 0 216 0 0 0 chr2 198933984 198934008 -51753846 + (GA)n Simple_repeat Simple_repeat 1 24 0 413 276 48 37 chr2 198934097 198934268 -51753586 - LTR16A LTR ERVL -212 245 70 236 180 0 20 chr2 198934389 198934439 -51753415 - MLT1J2 LTR MaLR -330 120 72 * 241 182 0 0 chr2 198934399 198934443 -51753411 - LTR67 LTR ERVL -404 153 110 2340 200 19 13 chr2 198934479 198935004 -51752850 - L1MA4 LINE L1 -5 6295 5768 406 121 0 0 chr2 198935004 198935061 -51752793 - L1PA16 LINE L1 -16 6150 6085 6956 165 43 29 chr2 198935118 198936472 -51751382 - L1PA16 LINE L1 -244 5922 4533 813 201 0 0 chr2 198936472 198936626 -51751228 - L1PA16 LINE L1 -16 6150 5997 6956 165 43 29 chr2 198936626 198937469 -51750385 - L1PA16 LINE L1 -1633 4533 3703 6662 200 61 24 chr2 198937469 198937851 -51750003 - L1 LINE L1 -3313 3015 2649 1827 177 3 3 chr2 198937851 198938156 -51749698 - AluSx SINE Alu -7 305 1 6662 200 61 24 chr2 198938156 198940692 -51747162 - L1 LINE L1 -3679 2649 12 875 238 112 53 chr2 198941095 198941442 -51746412 - MLT1J LTR MaLR -71 440 40 28 29 0 0 chr2 198942158 198942193 -51745661 + AT_rich Low_complexity Low_complexity 1 35 0 231 36 0 0 chr2 198942262 198942290 -51745564 + (T)n Simple_repeat Simple_repeat 1 28 0 214 392 138 4 chr2 198942593 198942833 -51745021 + L2 LINE L2 210 481 -2833 273 243 0 0 chr2 198942867 198942937 -51744917 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 208 357 137 20 chr2 198942948 198943248 -51744606 + L2 LINE L2 566 900 -2414 976 141 61 25 chr2 198944160 198944323 -51743531 + THE1B LTR MaLR 196 364 0 220 262 215 9 chr2 198944453 198944560 -51743294 + L2 LINE L2 3181 3309 -4 384 199 47 57 chr2 198945198 198945409 -51742445 + Charlie7 DNA MER1_type 2273 2481 -131 7185 51 1 1 chr2 198945428 198947032 -51740822 - L1PA5 LINE L1 0 6154 4550 2057 95 23 33 chr2 198947440 198947745 -51740109 + AluSp SINE Alu 1 302 -11 251 304 204 28 chr2 198947983 198948526 -51739328 - L2 LINE L2 -980 2334 1696 21 57 0 0 chr2 198950259 198950294 -51737560 + AT_rich Low_complexity Low_complexity 1 35 0 32965 86 20 7 chr2 198955142 198960683 -51727171 - L1PA6 LINE L1 -2 6152 542 2405 155 10 12 chr2 198960971 198961377 -51726477 - MER57B LTR ERV1 0 434 30 42866 34 21 0 chr2 198961378 198967400 -51720454 + L1PA2 LINE L1 1 6155 0 306 116 0 0 chr2 198967404 198967447 -51720407 - MER57B LTR ERV1 -389 45 3 51 31 0 0 chr2 198967769 198967834 -51720020 + AT_rich Low_complexity Low_complexity 1 65 0 651 290 119 40 chr2 198967918 198968415 -51719439 + HAL1b LINE L1 295 830 -518 22 0 0 0 chr2 198968675 198968697 -51719157 + AT_rich Low_complexity Low_complexity 1 22 0 551 286 77 64 chr2 198969069 198969509 -51718345 + L1M4 LINE L1 2740 3185 -2961 251 213 0 0 chr2 198969739 198969800 -51718054 + T-rich Low_complexity Low_complexity 1 61 0 7775 13 0 0 chr2 198969804 198970734 -51717120 - L1PA2 LINE L1 0 6155 5219 6635 30 0 0 chr2 198970734 198971530 -51716324 + L1PA2 LINE L1 4416 5211 -935 306 224 160 4 chr2 198974611 198974693 -51713161 - MER5A DNA MER1_type 0 189 98 213 325 121 0 chr2 198974708 198974791 -51713063 - MER5A DNA MER1_type -11 178 86 24 0 0 0 chr2 198975273 198975297 -51712557 + AT_rich Low_complexity Low_complexity 1 24 0 1098 247 42 65 chr2 198975337 198975738 -51712116 + L1MCb LINE L1 13 404 -5641 1258 147 0 5 chr2 198975739 198975929 -51711925 + AluSg/x SINE Alu 99 287 -25 180 0 0 0 chr2 198976335 198976355 -51711499 + (TA)n Simple_repeat Simple_repeat 2 21 0 261 0 0 0 chr2 198976355 198976384 -51711470 + (T)n Simple_repeat Simple_repeat 1 29 0 230 303 66 71 chr2 198976417 198976628 -51711226 + MLT1I LTR MaLR 65 274 -135 232 245 0 0 chr2 198977521 198977570 -51710284 + L2 LINE L2 3221 3269 -3 338 313 12 0 chr2 198979107 198979187 -51708667 - L2 LINE L2 -1 3312 3232 900 244 53 66 chr2 198980023 198980342 -51707512 + MLT1E LTR MaLR 8 443 -211 739 197 173 5 chr2 198980343 198980551 -51707303 - Charlie1 DNA MER1_type -332 2429 2187 836 175 22 60 chr2 198980559 198980742 -51707112 - AluJo SINE Alu -20 292 117 1397 195 61 3 chr2 198980743 198981040 -51706814 - Charlie1 DNA MER1_type -613 2148 1835 300 168 0 42 chr2 198982098 198982193 -51705661 + (TATG)n Simple_repeat Simple_repeat 4 94 0 1981 187 55 19 chr2 198982977 198983394 -51704460 - MSTB1 LTR MaLR 0 432 1 2569 298 65 74 chr2 198983395 198985273 -51702581 - MER89-int LTR ERV1 -183 4464 2604 1077 186 77 17 chr2 198985707 198985993 -51701861 + MER33 DNA MER1_type 1 295 -29 295 324 43 43 chr2 198986043 198986250 -51701604 - MER89-int LTR ERV1 -2842 3959 3753 406 243 19 0 chr2 198986417 198986520 -51701334 - L1ME LINE L1 -465 5701 5597 4964 117 16 20 chr2 198986523 198986902 -51700952 - L1PB4 LINE L1 0 6156 5777 291 28 0 0 chr2 198986902 198986938 -51700916 + (CA)n Simple_repeat Simple_repeat 2 37 0 4964 117 16 20 chr2 198986938 198987356 -51700498 - L1PB4 LINE L1 -379 5777 5362 2937 262 53 21 chr2 198987357 198988741 -51699113 - L1ME LINE L1 -573 5589 4165 2057 133 26 32 chr2 198990934 198991311 -51696543 + THE1C LTR MaLR 1 375 0 211 100 0 40 chr2 198991597 198991647 -51696207 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 477 315 31 6 chr2 198991749 198991911 -51695943 - MIR SINE MIR -68 194 29 736 259 82 37 chr2 198992186 198992541 -51695313 + L1ME2 LINE L1 5774 6144 -20 302 248 18 46 chr2 198992572 198992681 -51695173 + L1MC4 LINE L1 6392 6497 -1545 3423 241 90 14 chr2 198992739 198993810 -51694044 + L1MC4 LINE L1 6761 7912 -130 230 255 20 20 chr2 198993898 198993996 -51693858 + L1MC4 LINE L1 7920 8017 -25 601 13 26 0 chr2 198994846 198994924 -51692930 + (TCTA)n Simple_repeat Simple_repeat 4 83 0 21 36 0 0 chr2 198995113 198995141 -51692713 + AT_rich Low_complexity Low_complexity 1 28 0 198 376 11 0 chr2 198995415 198995508 -51692346 - MIR3 SINE MIR -39 169 76 197 338 95 14 chr2 198995665 198995813 -51692041 + L2 LINE L2 2173 2332 -982 27 62 0 0 chr2 198995964 198996012 -51691842 + AT_rich Low_complexity Low_complexity 1 48 0 34 55 0 0 chr2 198996940 198996995 -51690859 + AT_rich Low_complexity Low_complexity 1 55 0 21 57 0 0 chr2 198997065 198997100 -51690754 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr2 198997136 198997164 -51690690 + AT_rich Low_complexity Low_complexity 1 28 0 385 302 43 52 chr2 198997210 198997442 -51690412 - HAL1 LINE L1 -1357 1150 921 435 305 70 23 chr2 198997485 198997744 -51690110 - MLT1I LTR MaLR -33 376 106 613 304 116 32 chr2 198997820 198998293 -51689561 - HAL1 LINE L1 -1669 838 326 237 304 174 31 chr2 199001531 199001692 -51686162 - MIR SINE MIR -15 247 64 2449 36 0 0 chr2 199002369 199002650 -51685204 - AluY SINE Alu -17 294 14 560 289 47 30 chr2 199002714 199002946 -51684908 + MIR SINE MIR 26 261 -1 326 332 35 60 chr2 199003143 199003375 -51684479 - MIR SINE MIR -22 240 15 336 48 0 0 chr2 199003987 199004029 -51683825 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 2126 117 7 3 chr2 199004029 199004326 -51683528 - AluSc SINE Alu -8 301 1 21 71 0 0 chr2 199004328 199004370 -51683484 + AT_rich Low_complexity Low_complexity 1 42 0 1356 208 59 94 chr2 199008910 199009222 -51678632 - MLT1C LTR MaLR -3 464 173 3860 138 53 11 chr2 199009222 199009918 -51677936 - L1MA8 LINE L1 -3 6288 5564 1356 208 59 94 chr2 199009918 199010081 -51677773 - MLT1C LTR MaLR -294 173 6 512 318 97 4 chr2 199010221 199010479 -51677375 + L2 LINE L2 2884 3165 -148 243 96 58 0 chr2 199011905 199011957 -51675897 + (TA)n Simple_repeat Simple_repeat 2 56 0 303 269 59 0 chr2 199012346 199012465 -51675389 - MER103 DNA DNA -2 164 39 182 201 39 7 chr2 199013740 199013894 -51673960 + (TA)n Simple_repeat Simple_repeat 2 160 0 180 328 56 48 chr2 199014007 199014132 -51673722 + MIR SINE MIR 81 206 -56 208 316 101 44 chr2 199014688 199014846 -51673008 + L2 LINE L2 2941 3107 -165 411 21 0 0 chr2 199015307 199015355 -51672499 + (TG)n Simple_repeat Simple_repeat 1 48 0 550 320 23 6 chr2 199015494 199015666 -51672188 + MIR SINE MIR 23 197 -65 318 316 44 22 chr2 199015740 199015876 -51671978 - L1ME LINE L1 -491 5630 5492 649 318 211 22 chr2 199016088 199017121 -51670733 + L2 LINE L2 1977 3218 -95 45 69 0 0 chr2 199018265 199018352 -51669502 + AT_rich Low_complexity Low_complexity 1 87 0 26 0 0 0 chr2 199019062 199019088 -51668766 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr2 199019609 199019632 -51668222 + AT_rich Low_complexity Low_complexity 1 23 0 206 274 11 53 chr2 199019712 199019807 -51668047 + T-rich Low_complexity Low_complexity 4 94 0 28 29 0 0 chr2 199020425 199020460 -51667394 + AT_rich Low_complexity Low_complexity 1 35 0 3146 163 45 42 chr2 199020818 199021487 -51666367 + L1MA10 LINE L1 5664 6334 0 368 249 104 64 chr2 199021764 199021937 -51665917 + HsTC2 DNA Tc2 491 670 -1228 180 305 37 24 chr2 199021998 199022080 -51665774 - MIR3 SINE MIR -1 207 125 221 350 12 0 chr2 199022521 199022601 -51665253 - L3 LINE CR1 -267 1310 1230 21 0 0 0 chr2 199022924 199022945 -51664909 + AT_rich Low_complexity Low_complexity 1 21 0 290 310 120 45 chr2 199022974 199023174 -51664680 - L3 LINE CR1 -797 780 566 396 194 24 199 chr2 199023903 199024114 -51663740 - MER5B DNA MER1_type -3 175 2 226 100 100 0 chr2 199024140 199024180 -51663674 + MER116 DNA Mariner 34 77 -3 590 216 88 18 chr2 199024227 199024398 -51663456 - MIR SINE MIR 0 262 80 466 273 39 8 chr2 199024413 199024541 -51663313 + L2 LINE L2 3136 3267 -5 195 129 0 0 chr2 199024544 199024575 -51663279 + (GAAA)n Simple_repeat Simple_repeat 3 33 0 21 0 0 0 chr2 199026590 199026611 -51661243 + AT_rich Low_complexity Low_complexity 1 21 0 2073 181 51 73 chr2 199028386 199028878 -51658976 - MER67D LTR ERV1 -33 481 1 195 317 17 0 chr2 199031619 199031679 -51656175 + MIR SINE MIR 87 147 -115 369 329 77 49 chr2 199032334 199032684 -51655170 + L2 LINE L2 2923 3282 -31 321 301 35 58 chr2 199032700 199032873 -51654981 - MIR3 SINE MIR -39 169 1 4105 175 24 6 chr2 199033444 199034246 -51653608 + L1MC2 LINE L1 5518 6333 -11 183 270 32 32 chr2 199035004 199035067 -51652787 - L2 LINE L2 -2670 644 582 208 335 127 57 chr2 199035187 199035345 -51652509 - L2 LINE L2 -2815 499 331 25 0 0 0 chr2 199036153 199036178 -51651676 + AT_rich Low_complexity Low_complexity 1 25 0 202 331 87 8 chr2 199036856 199036983 -51650871 + MIR SINE MIR 126 262 0 230 295 16 0 chr2 199037046 199037107 -51650747 + Charlie8 DNA MER1_type 1 62 -2355 5362 178 30 29 chr2 199037861 199038080 -51649774 + L1PA15 LINE L1 4171 4388 -1777 273 29 0 0 chr2 199038080 199038114 -51649740 + (CA)n Simple_repeat Simple_repeat 2 35 0 5362 178 30 29 chr2 199038114 199039062 -51648792 + L1PA15 LINE L1 4388 5346 -819 2388 111 33 14 chr2 199039062 199039430 -51648424 - THE1C LTR MaLR 0 375 1 5362 178 30 29 chr2 199039430 199040252 -51647602 + L1PA15 LINE L1 5346 6165 0 317 280 24 0 chr2 199040984 199041109 -51646745 - MER103 DNA DNA -7 159 32 216 0 0 0 chr2 199041684 199041708 -51646146 + (A)n Simple_repeat Simple_repeat 1 24 0 371 214 27 62 chr2 199042642 199042754 -51645100 - MER63 DNA MER1_type -91 745 12 245 215 15 0 chr2 199043625 199043690 -51644164 + (TA)n Simple_repeat Simple_repeat 1 66 0 5598 173 35 31 chr2 199046992 199048510 -51639344 - L1MA4 LINE L1 0 7002 5486 * 6929 224 37 14 chr2 199048494 199050190 -51637664 - L1MA4 LINE L1 -3845 3003 1267 551 277 25 126 chr2 199050532 199050817 -51637037 - L1MA4 LINE L1 -5801 1048 793 443 308 103 58 chr2 199050832 199051056 -51636798 - L1MA4 LINE L1 -5948 901 668 396 343 191 49 chr2 199051210 199051534 -51636320 - L1MA4 LINE L1 -6035 814 445 563 324 58 29 chr2 199051709 199051987 -51635867 - L1MA4 LINE L1 -6428 421 136 556 83 36 0 chr2 199051999 199052083 -51635771 - L1 LINE L1 -1515 4631 4545 425 294 76 34 chr2 199052160 199052398 -51635456 + L1M4 LINE L1 3676 3923 -2223 470 305 64 22 chr2 199052423 199052925 -51634929 + L1M4 LINE L1 4881 5403 -743 226 150 0 0 chr2 199053100 199053140 -51634714 - MADE1 DNA Mariner -40 40 1 1342 187 3 75 chr2 199053406 199053455 -51634399 + MER77-int LTR ERV1 3848 3899 -292 2186 138 0 0 chr2 199053455 199053760 -51634094 + AluSx SINE Alu 1 305 -7 1342 187 3 75 chr2 199053760 199054015 -51633839 + MER77-int LTR ERV1 3899 4130 -61 1808 161 77 14 chr2 199054173 199054526 -51633328 + THE1C LTR MaLR 1 375 0 10140 119 34 8 chr2 199054526 199056067 -51631787 + THE1C-int LTR MaLR 1 1580 0 1860 148 70 20 chr2 199056067 199056424 -51631430 + THE1C LTR MaLR 1 375 0 531 195 0 0 chr2 199056721 199056834 -51631020 + CT-rich Low_complexity Low_complexity 3 115 0 1149 76 0 24 chr2 199056835 199057046 -51630808 + (TTTC)n Simple_repeat Simple_repeat 1 206 0 2184 98 0 0 chr2 199057047 199057323 -51630531 - AluSp SINE Alu -37 276 1 246 260 170 30 chr2 199057398 199057498 -51630356 + MER77 LTR ERV1 53 166 -439 622 257 104 90 chr2 199057527 199057637 -51630217 + MER77 LTR ERV1 136 243 -362 180 0 0 0 chr2 199057637 199057657 -51630197 + (CAAT)n Simple_repeat Simple_repeat 3 22 0 622 257 104 90 chr2 199057657 199058041 -51629813 + MER77 LTR ERV1 243 599 -6 6128 34 1 0 chr2 199059463 199060200 -51627654 - L1PA3 LINE L1 -1355 4791 4054 7664 26 0 0 chr2 199060200 199061568 -51626286 + L1PA3 LINE L1 4785 6152 -3 198 91 0 0 chr2 199062362 199062395 -51625459 + (TA)n Simple_repeat Simple_repeat 2 34 0 13594 152 27 15 chr2 199062646 199064797 -51623057 - Tigger1 DNA MER2_type -34 2384 200 2168 127 0 9 chr2 199064797 199065113 -51622741 + AluSp SINE Alu 1 313 0 13594 152 27 15 chr2 199065113 199065316 -51622538 - Tigger1 DNA MER2_type -2218 200 1 326 269 47 88 chr2 199068545 199068597 -51619257 - MIR SINE MIR -30 232 179 1955 153 73 15 chr2 199068597 199068937 -51618917 + THE1B LTR MaLR 1 360 -4 11287 98 13 2 chr2 199068941 199070504 -51617350 + THE1B-int LTR MaLR 1 1580 0 2014 140 79 15 chr2 199070504 199070846 -51617008 + THE1B LTR MaLR 1 364 0 326 269 47 88 chr2 199070846 199070980 -51616874 - MIR SINE MIR -84 178 48 259 253 46 0 chr2 199071676 199071763 -51616091 + (TATATG)n Simple_repeat Simple_repeat 5 95 0 898 149 43 16 chr2 199071827 199072015 -51615839 + L1MD3 LINE L1 7787 7979 -16 6761 157 24 7 chr2 199072101 199073311 -51614543 - Tigger3b DNA MER2_type 0 1231 1 972 190 61 41 chr2 199075690 199076025 -51611829 - MLT1A1 LTR MaLR 0 365 1 363 336 30 22 chr2 199076214 199076348 -51611506 - Charlie8 DNA MER1_type -2260 157 23 7221 40 0 1 chr2 199076517 199077396 -51610458 - L1PA4 LINE L1 0 6155 5278 19087 35 4 3 chr2 199077399 199080009 -51607845 + L1PA4 LINE L1 2671 5281 -865 328 324 103 22 chr2 199081020 199081156 -51606698 + L3b LINE CR1 1435 1581 -2 2240 53 0 27 chr2 199081445 199081745 -51606109 - AluY SINE Alu -19 292 1 387 306 106 15 chr2 199082156 199082355 -51605499 + MIR SINE MIR 37 253 -9 326 269 157 0 chr2 199082360 199082468 -51605386 - L2 LINE L2 -1 3312 3188 330 26 0 0 chr2 199082539 199082578 -51605276 + (TGGA)n Simple_repeat Simple_repeat 4 42 0 1940 248 90 8 chr2 199082949 199083331 -51604523 - L1M4 LINE L1 -1201 4945 4596 1879 112 3 58 chr2 199083331 199083655 -51604199 + AluSc SINE Alu 1 308 0 1940 248 90 8 chr2 199083655 199083914 -51603940 - L1M4 LINE L1 -1550 4596 4234 363 44 0 0 chr2 199083914 199083959 -51603895 + (TG)n Simple_repeat Simple_repeat 2 46 0 1940 248 90 8 chr2 199083959 199084045 -51603809 - L1M4 LINE L1 -1912 4234 4156 27 0 0 0 chr2 199084045 199084072 -51603782 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chr2 199084878 199084913 -51602941 + AT_rich Low_complexity Low_complexity 1 35 0 817 253 99 66 chr2 199085320 199085975 -51601879 - L1MC5 LINE L1 -36 7925 7249 292 293 36 14 chr2 199086077 199086217 -51601637 + (TATG)n Simple_repeat Simple_repeat 4 146 0 204 225 34 34 chr2 199087562 199087651 -51600203 + A-rich Low_complexity Low_complexity 2 90 0 330 261 63 3 chr2 199087688 199087881 -51599973 + L1ME LINE L1 5363 5566 -555 248 196 20 0 chr2 199087983 199088034 -51599820 + L1ME LINE L1 5757 5808 -313 261 0 21 64 chr2 199088199 199088246 -51599608 + (TATATG)n Simple_repeat Simple_repeat 1 45 0 1532 211 0 3 chr2 199088410 199088736 -51599118 + AluJo SINE Alu 1 325 0 234 97 0 0 chr2 199091021 199091052 -51596802 - L1P LINE L1 -6018 128 98 944 0 0 0 chr2 199091053 199091202 -51596652 + L1PA3 LINE L1 6037 6185 0 21 36 0 0 chr2 199091657 199091685 -51596169 + AT_rich Low_complexity Low_complexity 1 28 0 2171 99 0 0 chr2 199091685 199092003 -51595851 + AluSq SINE Alu 1 318 0 321 281 30 7 chr2 199092122 199092257 -51595597 + (TATATG)n Simple_repeat Simple_repeat 6 143 0 17186 84 6 5 chr2 199092290 199095493 -51592361 - L1PA7 LINE L1 0 6154 2952 4947 119 10 5 chr2 199095493 199096258 -51591596 + L1PA7 LINE L1 2181 2949 -3197 3264 183 28 64 chr2 199096734 199097528 -51590326 - L1MC3 LINE L1 -642 7143 6379 1617 145 150 44 chr2 199097841 199098228 -51589626 + MSTA LTR MaLR 1 428 0 23 54 0 0 chr2 199098351 199098388 -51589466 + AT_rich Low_complexity Low_complexity 1 37 0 307 193 57 80 chr2 199098897 199098985 -51588869 + MER20 DNA MER1_type 134 219 0 772 250 78 94 chr2 199099068 199099811 -51588043 - MER21B LTR ERV1 -38 567 6 22 70 0 0 chr2 199100890 199100933 -51586921 + AT_rich Low_complexity Low_complexity 1 43 0 27 29 0 0 chr2 199100968 199101002 -51586852 + AT_rich Low_complexity Low_complexity 1 34 0 26 0 0 0 chr2 199101465 199101491 -51586363 + AT_rich Low_complexity Low_complexity 1 26 0 226 270 32 16 chr2 199102024 199102087 -51585767 - MIR3 SINE MIR -16 192 129 181 349 15 0 chr2 199102069 199102135 -51585719 + L2 LINE L2 3247 3313 0 * 21 57 0 0 chr2 199102385 199102420 -51585434 + AT_rich Low_complexity Low_complexity 1 35 0 1954 137 3 7 chr2 199102768 199103083 -51584771 - AluSx SINE Alu 0 312 3 2163 104 3 3 chr2 199103803 199104102 -51583752 + AluSg SINE Alu 1 299 -11 2016 109 16 36 chr2 199104595 199104899 -51582955 - AluSx SINE Alu -14 298 1 1631 192 29 19 chr2 199105585 199105892 -51581962 + AluJb SINE Alu 2 311 -1 248 266 21 32 chr2 199106725 199106819 -51581035 - MLT1J1 LTR MaLR -1 445 353 1933 185 8 8 chr2 199107065 199107421 -51580433 + MLT1A1 LTR MaLR 10 365 0 185 95 0 71 chr2 199107582 199107624 -51580230 + (CA)n Simple_repeat Simple_repeat 2 40 0 1495 210 118 72 chr2 199109626 199110211 -51577643 + LTR9 LTR ERV1 1 612 0 368 240 115 83 chr2 199111510 199111702 -51576152 + MLT1K LTR MaLR 367 564 -24 424 226 38 12 chr2 199111833 199111976 -51575878 - L1MCa LINE L1 -3907 2657 2516 480 244 23 0 chr2 199111982 199112198 -51575656 - L1MCa LINE L1 -5126 919 639 969 119 145 19 chr2 199112226 199112435 -51575419 - L1MA7 LINE L1 -263 5903 5669 3147 171 67 2 chr2 199112437 199113003 -51574851 - MER6A DNA MER2_type -2 603 1 937 158 29 125 chr2 199113003 199113333 -51574521 - L1MA7 LINE L1 -630 5670 5398 438 217 122 0 chr2 199113342 199113417 -51574437 - L1MCa LINE L1 -5821 743 648 378 0 0 0 chr2 199113417 199113459 -51574395 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 438 217 122 0 chr2 199113459 199113498 -51574356 - L1MCa LINE L1 -5916 648 615 1832 182 50 22 chr2 199113506 199113908 -51573946 - MER49 LTR ERV1 0 923 511 496 213 0 0 chr2 199113908 199114002 -51573852 - L1MCa LINE L1 -6226 338 245 297 183 0 42 chr2 199114002 199114073 -51573781 - MER49 LTR ERV1 -406 517 450 2484 168 18 7 chr2 199114115 199114561 -51573293 - MER49 LTR ERV1 -472 451 1 1607 242 33 29 chr2 199114561 199115012 -51572842 - L1MCa LINE L1 -5953 611 159 542 286 95 6 chr2 199115255 199115423 -51572431 + MIR SINE MIR 9 191 -71 237 33 0 0 chr2 199116221 199116251 -51571603 + (GA)n Simple_repeat Simple_repeat 1 30 0 1506 131 9 5 chr2 199116419 199116641 -51571213 - AluSx SINE Alu -87 225 3 217 331 181 0 chr2 199116662 199116789 -51571065 - MIR SINE MIR -52 210 61 210 291 0 0 chr2 199116854 199116909 -51570945 - MIR3 SINE MIR -4 204 150 1540 160 40 126 chr2 199118351 199118802 -51569052 - MLT2D LTR ERVL -2 412 1 432 0 0 0 chr2 199118851 199118899 -51568955 + (CA)n Simple_repeat Simple_repeat 2 49 0 330 293 57 7 chr2 199119653 199119793 -51568061 + L1MC3 LINE L1 4078 4224 -1922 8072 205 75 42 chr2 199119917 199120379 -51567475 + L1MC3 LINE L1 5140 5585 -2200 2434 61 0 6 chr2 199120379 199120691 -51567163 + AluY SINE Alu 1 310 -1 8072 205 75 42 chr2 199120691 199121887 -51565967 + L1MC3 LINE L1 5585 6740 -1045 245 95 0 24 chr2 199121887 199121929 -51565925 + (CA)n Simple_repeat Simple_repeat 2 42 0 8072 205 75 42 chr2 199121929 199122147 -51565707 + L1MC3 LINE L1 6740 6949 -836 267 296 12 0 chr2 199122147 199122228 -51565626 + MLT1F1 LTR MaLR 30 111 -456 8072 205 75 42 chr2 199122228 199122528 -51565326 + L1MC3 LINE L1 6949 7474 -311 408 254 321 0 chr2 199122571 199122705 -51565149 - L1MC/D LINE L1 -2153 5655 5479 214 333 90 35 chr2 199122707 199122851 -51565003 - MIR SINE MIR -102 160 9 508 290 145 18 chr2 199124655 199124986 -51562868 - MERVL LTR ERVL -2626 2859 2487 266 343 40 25 chr2 199125255 199125456 -51562398 + L2 LINE L2 1686 1889 -1425 439 319 76 17 chr2 199125505 199125624 -51562230 + MER91A DNA MER1_type 61 186 -10 1245 281 132 41 chr2 199125633 199126241 -51561613 + L2 LINE L2 1884 2546 -768 185 271 34 0 chr2 199126254 199126313 -51561541 - L2 LINE L2 -1104 2210 2150 240 114 0 0 chr2 199126325 199126360 -51561494 - MIR SINE MIR -13 249 215 200 200 0 0 chr2 199127537 199127572 -51560282 + (TATATG)n Simple_repeat Simple_repeat 5 39 0 21 0 0 0 chr2 199127986 199128007 -51559847 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 199130580 199130619 -51557235 + AT_rich Low_complexity Low_complexity 1 39 0 2234 76 0 3 chr2 199130799 199131125 -51556729 + AluY SINE Alu 1 311 0 2207 140 23 6 chr2 199131476 199131826 -51556028 - MLT1A1 LTR MaLR 0 365 10 204 245 0 0 chr2 199131892 199131941 -51555913 + (TAA)n Simple_repeat Simple_repeat 1 49 0 24 32 0 0 chr2 199132501 199132532 -51555322 + AT_rich Low_complexity Low_complexity 1 31 0 299 269 87 29 chr2 199134415 199134519 -51553335 + MER119 DNA MER1_type 31 140 -443 437 253 0 0 chr2 199134523 199134614 -51553240 + MLT1A2 LTR MaLR 1 91 -283 380 240 70 0 chr2 199134622 199134722 -51553132 + MER119 DNA MER1_type 477 583 0 323 347 40 16 chr2 199134731 199134855 -51552999 - L2 LINE L2 0 3272 3146 202 56 56 0 chr2 199135321 199135357 -51552497 + (CA)n Simple_repeat Simple_repeat 2 39 0 29 47 0 0 chr2 199136393 199136436 -51551418 + AT_rich Low_complexity Low_complexity 1 43 0 1045 328 28 24 chr2 199136453 199137096 -51550758 - L2 LINE L2 0 3313 2668 506 298 90 0 chr2 199137275 199137463 -51550391 + LTR53 LTR ERVL 120 324 -195 240 318 75 28 chr2 199137470 199137577 -51550277 - L2 LINE L2 -749 2565 2454 12061 160 26 21 chr2 199137577 199138686 -51549168 + L1MA3 LINE L1 9 1111 -6613 2011 113 0 48 chr2 199138686 199138996 -51548858 + AluSg SINE Alu 5 299 -11 12061 160 26 21 chr2 199138996 199143063 -51544791 + L1MA3 LINE L1 1111 7723 -1 327 358 40 0 chr2 199143097 199143248 -51544606 - L2 LINE L2 -832 2482 2326 234 154 0 0 chr2 199143357 199143396 -51544458 + LTR16A LTR ERVL 1 39 -411 251 344 95 38 chr2 199143470 199143732 -51544122 + LTR16A LTR ERVL 174 450 0 504 286 113 39 chr2 199143732 199143955 -51543899 - L2 LINE L2 -1164 2150 1896 1777 157 52 22 chr2 199143955 199144319 -51543535 + THE1C LTR MaLR 1 375 0 504 286 113 39 chr2 199144319 199144406 -51543448 - L2 LINE L2 -1418 1896 1817 268 286 33 0 chr2 199144508 199144599 -51543255 - L2 LINE L2 -1738 1576 1483 720 298 95 25 chr2 199145010 199145326 -51542528 + L2 LINE L2 2956 3293 -20 22 56 0 0 chr2 199147367 199147403 -51540451 + AT_rich Low_complexity Low_complexity 1 36 0 5540 90 18 0 chr2 199148177 199149044 -51538810 - L1P3 LINE L1 -699 5473 4598 3671 58 31 4 chr2 199149044 199149530 -51538324 + L1PA7 LINE L1 5653 6152 -2 21 57 0 0 chr2 199152463 199152498 -51535356 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 199154435 199154456 -51533398 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 199155162 199155184 -51532670 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr2 199155626 199155660 -51532194 + AT_rich Low_complexity Low_complexity 1 34 0 2514 102 21 16 chr2 199155966 199156339 -51531515 - THE1C LTR MaLR 0 375 1 2182 108 0 0 chr2 199157134 199157429 -51530425 - AluSg SINE Alu -13 297 3 1872 176 23 26 chr2 199158276 199158632 -51529222 + L1MA8 LINE L1 5864 6220 -71 14081 145 28 4 chr2 199158632 199160993 -51526861 - Tigger1 DNA MER2_type 0 2418 2 1872 176 23 26 chr2 199160993 199161023 -51526831 + L1MA8 LINE L1 6220 6249 -42 28 0 0 0 chr2 199161649 199161677 -51526177 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 199162390 199162413 -51525441 + AT_rich Low_complexity Low_complexity 1 23 0 882 272 19 27 chr2 199164203 199164460 -51523394 - MIR SINE MIR 0 262 8 22 0 0 0 chr2 199165766 199165788 -51522066 + AT_rich Low_complexity Low_complexity 1 22 0 221 265 0 0 chr2 199166225 199166274 -51521580 + A-rich Low_complexity Low_complexity 2 50 0 2180 81 0 98 chr2 199167012 199167359 -51520495 - AluSq SINE Alu 0 313 1 2206 114 0 0 chr2 199169004 199169312 -51518542 - AluSg SINE Alu -2 308 1 25 0 0 0 chr2 199169319 199169344 -51518510 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 199170576 199170599 -51517255 + AT_rich Low_complexity Low_complexity 1 23 0 1631 299 148 35 chr2 199171158 199172219 -51515635 - L2 LINE L2 -124 3189 1997 22 35 0 0 chr2 199172360 199172389 -51515465 + AT_rich Low_complexity Low_complexity 1 29 0 234 356 58 19 chr2 199172920 199173024 -51514830 - L2 LINE L2 -217 3055 2948 417 294 8 0 chr2 199173318 199173444 -51514410 - MER94 DNA DNA -2 132 6 23 0 0 0 chr2 199174031 199174054 -51513800 + AT_rich Low_complexity Low_complexity 1 23 0 879 29 0 0 chr2 199174455 199174560 -51513294 - L1PA2 LINE L1 0 6155 6051 3174 34 0 0 chr2 199174560 199174940 -51512914 + L1P LINE L1 4717 5096 -1050 204 125 62 0 chr2 199175379 199175427 -51512427 + (TA)n Simple_repeat Simple_repeat 2 52 0 853 239 14 0 chr2 199175436 199175649 -51512205 + L1MC4 LINE L1 7684 7899 -143 253 125 25 0 chr2 199175876 199175916 -51511938 - L1PA12 LINE L1 -16 6152 6112 * 1511 188 40 13 chr2 199175885 199175941 -51511913 + L1MA5A LINE L1 5678 5731 -452 224 57 0 29 chr2 199175941 199175976 -51511878 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 1511 188 40 13 chr2 199175976 199176277 -51511577 + L1MA5A LINE L1 5731 6047 -136 673 179 99 30 chr2 199176279 199176480 -51511374 - L1M4 LINE L1 -1407 4739 4525 187 213 16 16 chr2 199176638 199176699 -51511155 + (TA)n Simple_repeat Simple_repeat 2 62 0 7433 133 38 20 chr2 199176849 199178120 -51509734 - HSMAR2 DNA Mariner -9 1293 1 235 265 0 0 chr2 199179035 199179084 -51508770 + L2 LINE L2 3265 3313 0 29 28 0 0 chr2 199179664 199179700 -51508154 + AT_rich Low_complexity Low_complexity 1 36 0 3200 146 27 13 chr2 199179705 199180226 -51507628 - L1P LINE L1 -5608 538 11 12861 54 6 7 chr2 199180253 199181987 -51505867 + L1P LINE L1 1921 3717 -2429 959 206 57 92 chr2 199182446 199182814 -51505040 + MLT1B LTR MaLR 20 374 -16 195 323 15 0 chr2 199184960 199185025 -51502829 - L2 LINE L2 -2 3311 3246 260 265 125 66 chr2 199185252 199185388 -51502466 - L2 LINE L2 -554 2760 2617 187 301 107 0 chr2 199185464 199185567 -51502287 + L2 LINE L2 1918 2031 -1283 204 125 0 0 chr2 199186748 199186780 -51501074 + (ATG)n Simple_repeat Simple_repeat 2 33 0 3168 36 0 3 chr2 199187474 199187858 -51499996 - L1PA4 LINE L1 -3 6152 5770 41993 39 22 1 chr2 199187873 199193897 -51493957 - L1PA3 LINE L1 -4 6151 1 32315 43 1 0 chr2 199193897 199198322 -51489532 - L1PA4 LINE L1 -369 5786 1361 2081 84 32 0 chr2 199198407 199198692 -51489162 - AluSp SINE Alu -8 305 12 249 333 61 56 chr2 199198916 199199114 -51488740 - MLT1K LTR MaLR -273 315 117 1385 217 100 22 chr2 199199145 199199505 -51488349 - MSTD LTR MaLR -5 391 4 1007 219 0 34 chr2 199199677 199199915 -51487939 + L1MA10 LINE L1 6090 6319 -15 5875 100 8 0 chr2 199199979 199200810 -51487044 - L1PA12 LINE L1 0 6168 5331 2594 237 47 43 chr2 199200960 199202198 -51485656 - L1ME2 LINE L1 -1 6163 4921 237 320 109 0 chr2 199202630 199202805 -51485049 + L1M4 LINE L1 2884 3077 -3069 2117 132 3 7 chr2 199202810 199203120 -51484734 + AluSq SINE Alu 1 309 -4 1488 296 121 27 chr2 199203140 199204757 -51483097 + L1M4 LINE L1 3112 4920 -1226 1797 153 20 17 chr2 199205201 199205501 -51482353 + AluJb SINE Alu 1 301 -11 617 177 85 67 chr2 199205529 199205693 -51482161 + MLT1A1 LTR MaLR 1 167 -198 2281 69 4 0 chr2 199206242 199206516 -51481338 + AluSp SINE Alu 1 275 -38 780 96 0 0 chr2 199206520 199206635 -51481219 + (GGAA)n Simple_repeat Simple_repeat 3 117 0 960 298 56 30 chr2 199207641 199207980 -51479874 + L1MB1 LINE L1 1 348 -5543 1181 237 67 0 chr2 199208007 199208323 -51479531 + L1MB1 LINE L1 2533 2869 -3101 6771 171 10 19 chr2 199208323 199210048 -51477806 + L1PB1 LINE L1 3901 5608 -543 448 171 0 0 chr2 199210050 199210126 -51477728 - L1PBa LINE L1 -6152 711 636 290 93 56 0 chr2 199210127 199210181 -51477673 + L1PB1 LINE L1 6094 6150 -1 3643 111 0 19 chr2 199210197 199210766 -51477088 + L1PB1 LINE L1 5593 6150 -1 1032 194 11 5 chr2 199210785 199210971 -51476883 + AluJ SINE Alu 1 187 -125 494 163 8 81 chr2 199211082 199211205 -51476649 + AluJ SINE Alu 191 304 -8 258 198 178 30 chr2 199211206 199211307 -51476547 + L1MB1 LINE L1 2865 2980 -2990 6888 222 45 25 chr2 199211374 199212390 -51475464 + L1MB1 LINE L1 2984 3978 -2014 198 0 0 0 chr2 199212390 199212412 -51475442 + (GAAA)n Simple_repeat Simple_repeat 3 24 0 6888 222 45 25 chr2 199212412 199214334 -51473520 + L1MB1 LINE L1 3978 5987 -5 525 224 9 0 chr2 199215420 199215527 -51472327 + LTR67 LTR ERVL 442 549 -8 268 255 79 60 chr2 199216323 199216485 -51471369 + MIR SINE MIR 99 262 0 22 0 0 0 chr2 199216671 199216693 -51471161 + AT_rich Low_complexity Low_complexity 1 22 0 2199 170 59 2 chr2 199216715 199217121 -51470733 + MSTB1 LTR MaLR 4 432 0 311 239 66 0 chr2 199217696 199217813 -51470041 + L1ME3A LINE L1 5753 5885 -277 587 289 58 45 chr2 199218157 199218763 -51469091 + HAL1b LINE L1 61 790 -558 704 226 98 36 chr2 199218776 199219081 -51468773 + HAL1b LINE L1 944 1267 -81 33 0 0 0 chr2 199219317 199219350 -51468504 + AT_rich Low_complexity Low_complexity 1 33 0 33 43 0 0 chr2 199219934 199219981 -51467873 + AT_rich Low_complexity Low_complexity 1 47 0 1888 127 42 70 chr2 199220060 199220446 -51467408 + THE1C LTR MaLR 1 375 0 939 50 0 0 chr2 199220832 199220952 -51466902 - L1PA4 LINE L1 0 6155 6036 41 48 0 0 chr2 199221490 199221552 -51466302 + AT_rich Low_complexity Low_complexity 1 62 0 201 293 46 75 chr2 199221893 199222067 -51465787 - L2 LINE L2 -14 3299 3131 771 167 40 147 chr2 199222259 199222510 -51465344 + AluJb SINE Alu 89 312 0 2477 158 7 12 chr2 199222732 199223150 -51464704 + MER47B DNA MER2_type 1 416 -2 474 306 131 33 chr2 199223603 199224054 -51463800 - MLT1J LTR MaLR -14 497 3 242 333 41 16 chr2 199224179 199224302 -51463552 - L2 LINE L2 -1 3312 3187 900 213 78 3 chr2 199224361 199224811 -51463043 + MER34 LTR ERV1 27 539 -3 472 249 92 90 chr2 199224857 199225187 -51462667 + MER34-int LTR ERV1 32 365 -5966 7584 26 1 2 chr2 199225187 199226338 -51461516 + L1PA4 LINE L1 5003 6152 -3 472 249 92 90 chr2 199226338 199226453 -51461401 + MER34-int LTR ERV1 365 478 -5853 251 245 85 57 chr2 199226578 199226684 -51461170 + MER34-int LTR ERV1 1386 1494 -4837 764 202 81 43 chr2 199226822 199227144 -51460710 + MER34-int LTR ERV1 1231 1564 -3372 2165 126 3 0 chr2 199227151 199227453 -51460401 - AluSx SINE Alu -9 303 1 592 217 52 84 chr2 199227567 199227597 -51460257 + MER34-int LTR ERV1 4628 4657 -1458 680 189 16 0 chr2 199227597 199227724 -51460130 - FLAM_A SINE Alu 0 133 5 592 217 52 84 chr2 199227724 199227887 -51459967 + MER34-int LTR ERV1 4657 5877 -238 690 212 114 11 chr2 199228342 199228526 -51459328 + MER34 LTR ERV1 27 229 -313 5188 67 0 3 chr2 199228531 199229201 -51458653 - L1PA6 LINE L1 -11 6143 5476 1491 58 0 0 chr2 199229206 199229394 -51458460 - L1PA3 LINE L1 -2 6153 5966 27386 80 66 7 chr2 199229394 199234555 -51453299 - L1PA6 LINE L1 -679 5475 11 901 186 40 40 chr2 199234631 199234857 -51452997 + MER34 LTR ERV1 317 542 0 288 0 0 0 chr2 199236361 199236393 -51451461 + (TG)n Simple_repeat Simple_repeat 2 33 0 212 375 59 21 chr2 199236435 199236672 -51451182 - L2 LINE L2 -1317 1997 1752 1370 124 28 0 chr2 199237399 199237616 -51450238 + MER41B LTR ERV1 413 635 0 252 86 0 0 chr2 199237949 199237984 -51449870 + (TCCC)n Simple_repeat Simple_repeat 4 38 0 189 121 0 0 chr2 199238865 199238898 -51448956 + (CATG)n Simple_repeat Simple_repeat 3 35 0 298 328 29 52 chr2 199238927 199239101 -51448753 + MIR SINE MIR 18 142 -66 1967 139 7 26 chr2 199239174 199239483 -51448371 + AluSx SINE Alu 1 303 -9 513 318 23 12 chr2 199241600 199241773 -51446081 - MER5B DNA MER1_type -2 176 2 324 284 167 0 chr2 199242218 199242320 -51445534 + MLT1J LTR MaLR 17 135 -376 2432 110 55 0 chr2 199243634 199243979 -51443875 - THE1B LTR MaLR 0 364 1 1823 145 60 36 chr2 199245238 199245603 -51442251 + THE1C LTR MaLR 2 375 0 997 199 27 81 chr2 199246009 199246305 -51441549 + L1MA7 LINE L1 4586 4865 -1281 5650 104 23 1 chr2 199246307 199247134 -51440720 - L1PB1 LINE L1 -8 6143 5299 3508 160 21 35 chr2 199247178 199247988 -51439866 + L1MA7 LINE L1 5387 6291 0 22 0 0 0 chr2 199248437 199248459 -51439395 + AT_rich Low_complexity Low_complexity 1 22 0 346 208 69 0 chr2 199248463 199248535 -51439319 + AluSg SINE Alu 3 79 -221 41 21 0 0 chr2 199248826 199248874 -51438980 + AT_rich Low_complexity Low_complexity 1 48 0 508 226 20 75 chr2 199249842 199249988 -51437866 + MER5B DNA MER1_type 1 138 -40 260 210 0 111 chr2 199250313 199250394 -51437460 + L2 LINE L2 3193 3264 -8 2132 88 6 38 chr2 199250950 199251269 -51436585 + AluSc SINE Alu 1 309 0 27 0 0 0 chr2 199251308 199251335 -51436519 + AT_rich Low_complexity Low_complexity 1 27 0 577 285 175 59 chr2 199251458 199251598 -51436256 + L1MC4a LINE L1 5817 5939 -1869 2254 105 0 3 chr2 199251598 199251902 -51435952 - AluSq SINE Alu -10 303 1 577 285 175 59 chr2 199251902 199252354 -51435500 + L1MC4a LINE L1 5939 6478 -1330 2081 233 60 102 chr2 199252436 199253685 -51434169 + L1MC5 LINE L1 6497 7797 -164 414 0 0 0 chr2 199253685 199253731 -51434123 + (TG)n Simple_repeat Simple_repeat 1 46 0 1665 151 16 0 chr2 199253732 199253983 -51433871 - AluJb SINE Alu -53 259 5 2081 233 60 102 chr2 199253983 199254215 -51433639 + L1MC5 LINE L1 7796 7931 -30 391 91 36 0 chr2 199254464 199254519 -51433335 - AluJ/FRAM SINE Alu -14 288 232 42459 38 22 1 chr2 199255540 199261557 -51426297 + L1PA3 LINE L1 5 6147 -8 2410 90 0 0 chr2 199262194 199262504 -51425350 - AluSx SINE Alu -2 310 1 2069 129 0 0 chr2 199262599 199262879 -51424975 + AluSx SINE Alu 1 280 -32 1239 63 0 0 chr2 199262953 199263112 -51424742 - L1PA5 LINE L1 -3 6151 5993 4303 118 23 13 chr2 199263262 199263963 -51423891 - L1MA3 LINE L1 -2 6303 5596 9317 156 32 13 chr2 199263964 199265507 -51422347 - L1M1 LINE L1 -5961 1604 33 334 342 65 22 chr2 199265693 199265877 -51421977 - MIR SINE MIR -6 256 65 2054 103 7 0 chr2 199266886 199267194 -51420660 - AluY SINE Alu 0 310 1 205 360 35 18 chr2 199267853 199267967 -51419887 + L2 LINE L2 2935 3050 -222 218 31 0 31 chr2 199269217 199269249 -51418605 + (TATAA)n Simple_repeat Simple_repeat 2 32 0 364 259 179 3 chr2 199269607 199269728 -51418126 + MIR SINE MIR 16 152 -62 1836 157 24 0 chr2 199271393 199271686 -51416168 - AluJb SINE Alu -12 300 1 200 33 0 33 chr2 199272343 199272373 -51415481 + (TAA)n Simple_repeat Simple_repeat 3 31 0 623 244 62 24 chr2 199272376 199272585 -51415269 - L2 LINE L2 -6 3307 3091 344 317 10 10 chr2 199272702 199272806 -51415048 - MIR SINE MIR -68 140 37 661 285 102 13 chr2 199273075 199273310 -51414544 + MIR SINE MIR 5 260 -2 529 175 97 9 chr2 199273421 199273535 -51414319 - L1M4 LINE L1 -5901 641 518 4255 137 61 28 chr2 199273564 199274399 -51413455 - L1MA8 LINE L1 -14 6277 5415 1880 198 67 33 chr2 199274401 199274898 -51412956 + L1M3e LINE L1 1694 2172 -4865 1987 148 3 13 chr2 199274898 199275203 -51412651 + AluJb SINE Alu 1 302 -10 1880 198 67 33 chr2 199275203 199275295 -51412559 + L1M3e LINE L1 2172 2259 -4778 1398 190 0 72 chr2 199275295 199275626 -51412228 + AluJb SINE Alu 1 309 0 1880 198 67 33 chr2 199275626 199275718 -51412136 + L1M3e LINE L1 2259 2384 -4653 1799 269 25 25 chr2 199275717 199276227 -51411627 - L1M4 LINE L1 -6018 524 15 * 2230 192 22 24 chr2 199276709 199276741 -51411113 - L1M4 LINE L1 -1273 4873 4842 2546 107 11 11 chr2 199276741 199277114 -51410740 - THE1C LTR MaLR -2 373 1 2230 192 22 24 chr2 199277114 199277622 -51410232 - L1M4 LINE L1 -1304 4842 4334 21 0 0 0 chr2 199279897 199279918 -51407936 + AT_rich Low_complexity Low_complexity 1 21 0 1923 206 91 22 chr2 199280128 199280730 -51407124 - MER114 LTR ERV -2 646 3 695 149 97 39 chr2 199280938 199281092 -51406762 - FRAM SINE Alu -17 159 1 21 82 0 0 chr2 199281777 199281826 -51406028 + AT_rich Low_complexity Low_complexity 1 49 0 2051 266 70 44 chr2 199283496 199284354 -51403500 - L1ME1 LINE L1 -33 6133 5254 477 330 101 6 chr2 199284628 199284807 -51403047 + MIR SINE MIR 56 251 -11 21 57 0 0 chr2 199285311 199285346 -51402508 + AT_rich Low_complexity Low_complexity 1 35 0 182 176 20 0 chr2 199285503 199285554 -51402300 + GA-rich Low_complexity Low_complexity 1 52 0 582 265 5 63 chr2 199285578 199285767 -51402087 - MER5B DNA MER1_type 0 178 1 334 322 34 14 chr2 199286013 199286159 -51401695 + MIR3 SINE MIR 46 194 -14 242 314 29 7 chr2 199286959 199287099 -51400755 - L1ME LINE L1 -285 5885 5743 279 324 78 21 chr2 199287242 199287384 -51400470 + LTR33 LTR ERVL 310 459 -62 804 277 90 14 chr2 199287396 199287685 -51400169 - L1MEd LINE L1 -5475 644 334 226 186 34 17 chr2 199288242 199288301 -51399553 - L1M3 LINE L1 -736 5447 5388 180 0 0 0 chr2 199288301 199288321 -51399533 + (TA)n Simple_repeat Simple_repeat 1 20 0 243 228 15 86 chr2 199288340 199288537 -51399317 - L1M3 LINE L1 -782 5364 5182 23 0 0 0 chr2 199288670 199288693 -51399161 + AT_rich Low_complexity Low_complexity 1 23 0 304 288 53 61 chr2 199289047 199289108 -51398746 - L1ME4a LINE L1 -36 6085 6025 2571 91 8 3 chr2 199289108 199289461 -51398393 - THE1A LTR MaLR 0 355 1 11083 104 8 4 chr2 199289461 199291035 -51396819 - THE1A-int LTR MaLR 0 1580 1 2514 88 11 8 chr2 199291035 199291389 -51396465 - THE1A LTR MaLR 0 355 1 304 288 53 61 chr2 199291389 199291457 -51396397 - L1ME4a LINE L1 -93 6028 5955 313 227 0 27 chr2 199291875 199291950 -51395904 + MER94 DNA DNA 1 73 -61 1541 207 10 16 chr2 199291957 199292271 -51395583 + AluJo SINE Alu 1 312 0 2917 131 31 33 chr2 199292784 199293297 -51394557 + Tigger1 DNA MER2_type 1 512 -1906 1797 187 30 2 chr2 199293676 199294078 -51393776 + L1 LINE L1 2939 3351 -2795 2518 135 23 3 chr2 199294078 199294470 -51393384 + MSTA LTR MaLR 1 400 -28 259 149 30 60 chr2 199294476 199294543 -51393311 + MSTA LTR MaLR 361 425 -3 3957 182 31 12 chr2 199294543 199295355 -51392499 + L1 LINE L1 3349 4175 -1971 2178 87 28 3 chr2 199295355 199295643 -51392211 + AluY SINE Alu 1 295 -16 34 0 0 0 chr2 199295690 199295724 -51392130 + AT_rich Low_complexity Low_complexity 1 34 0 1386 194 50 41 chr2 199295881 199296221 -51391633 + MLT1A1 LTR MaLR 11 353 -12 1200 269 91 17 chr2 199298057 199298540 -51389314 + LTR40a LTR ERVL 1 519 0 1796 206 26 0 chr2 199299071 199299411 -51388443 - MLT1A1 LTR MaLR 0 365 17 214 361 83 0 chr2 199299719 199299827 -51388027 + L2 LINE L2 3179 3295 -18 378 205 13 0 chr2 199300443 199300521 -51387333 + MER116 DNA Mariner 1 79 -1 755 245 75 40 chr2 199301961 199302214 -51385640 + MIR SINE MIR 1 262 0 519 263 70 53 chr2 199302399 199302570 -51385284 + MLT1A2 LTR MaLR 1 174 -216 856 267 5 5 chr2 199302613 199302808 -51385046 + MLT1A2 LTR MaLR 173 367 -7 6103 188 29 25 chr2 199303060 199305188 -51382666 + L1MC1 LINE L1 4196 6333 0 22 0 0 0 chr2 199306107 199306129 -51381725 + AT_rich Low_complexity Low_complexity 1 22 0 883 209 12 0 chr2 199306133 199306305 -51381549 + FAM SINE Alu 1 174 -1 389 306 22 0 chr2 199306393 199306527 -51381327 - MIR SINE MIR 0 262 126 26 74 0 0 chr2 199306613 199306667 -51381187 + AT_rich Low_complexity Low_complexity 1 54 0 239 223 240 8 chr2 199306693 199306814 -51381040 - L2 LINE L2 -67 3246 3098 1424 221 142 25 chr2 199306861 199307269 -51380585 + LTR40c LTR ERVL 7 462 -3 184 267 40 27 chr2 199307269 199307344 -51380510 - MIR SINE MIR -177 85 10 24 32 0 0 chr2 199307436 199307467 -51380387 + AT_rich Low_complexity Low_complexity 1 31 0 4464 38 0 0 chr2 199308061 199308591 -51379263 + L1P LINE L1 3927 4456 -1690 33 0 0 0 chr2 199308673 199308706 -51379148 + AT_rich Low_complexity Low_complexity 1 33 0 210 195 24 0 chr2 199308942 199308983 -51378871 + (TCTA)n Simple_repeat Simple_repeat 2 43 0 477 354 115 48 chr2 199310335 199311308 -51376546 + L2 LINE L2 1940 2977 -337 29 28 0 0 chr2 199311380 199311416 -51376438 + AT_rich Low_complexity Low_complexity 1 36 0 938 280 132 5 chr2 199311563 199311949 -51375905 - MLT1H LTR MaLR -56 493 59 24 67 0 0 chr2 199313334 199313379 -51374475 + AT_rich Low_complexity Low_complexity 1 45 0 22 35 0 0 chr2 199313446 199313475 -51374379 + AT_rich Low_complexity Low_complexity 1 29 0 856 105 0 0 chr2 199313837 199313951 -51373903 + AluJb SINE Alu 12 125 -187 185 51 17 102 chr2 199313962 199314021 -51373833 + (CAAAAA)n Simple_repeat Simple_repeat 1 54 0 976 173 0 0 chr2 199314022 199314184 -51373670 + FRAM SINE Alu 3 164 -2 191 246 169 0 chr2 199314640 199314705 -51373149 + MIR SINE MIR 69 144 -118 377 116 14 0 chr2 199314875 199314944 -51372910 + (CA)n Simple_repeat Simple_repeat 1 70 0 290 318 100 0 chr2 199315778 199315888 -51371966 + MER5B DNA MER1_type 58 178 0 9917 197 33 67 chr2 199316595 199317862 -51369992 - L1PA16 LINE L1 -2 6164 4855 1687 127 6 115 chr2 199317862 199318201 -51369653 - AluSx SINE Alu 0 302 1 9917 197 33 67 chr2 199318201 199318823 -51369031 - L1PA16 LINE L1 -1311 4855 4213 357 24 0 0 chr2 199318823 199318865 -51368989 + (TG)n Simple_repeat Simple_repeat 1 42 0 9917 197 33 67 chr2 199318865 199319484 -51368370 - L1PA16 LINE L1 -1953 4213 3574 1970 141 7 0 chr2 199319484 199319774 -51368080 - AluSx SINE Alu -20 292 1 9917 197 33 67 chr2 199319774 199320677 -51367177 - L1PA16 LINE L1 -2592 3574 2950 8264 48 0 0 chr2 199320677 199322460 -51365394 - L1PA5 LINE L1 -9 6145 4364 9917 197 33 67 chr2 199322460 199322774 -51365080 - L1PA16 LINE L1 -3216 2950 2627 756 254 76 60 chr2 199322790 199323105 -51364749 - MLT1D LTR MaLR -183 322 3 221 146 21 0 chr2 199323122 199323170 -51364684 + (CA)n Simple_repeat Simple_repeat 2 50 0 500 222 7 76 chr2 199324774 199324819 -51363035 + MER94 DNA DNA 1 48 -86 837 220 84 0 chr2 199324819 199325010 -51362844 - MER3 DNA MER1_type 0 209 3 500 222 7 76 chr2 199325010 199325108 -51362746 + MER94 DNA DNA 48 134 0 673 335 97 23 chr2 199326739 199327357 -51360497 + L1M4 LINE L1 4613 5276 -870 429 354 80 38 chr2 199327360 199327634 -51360220 + L2 LINE L2 2425 2717 -597 2006 119 14 0 chr2 199327634 199327927 -51359927 + AluSx SINE Alu 1 297 -15 429 354 80 38 chr2 199327927 199327991 -51359863 + L2 LINE L2 2717 2777 -537 449 337 97 14 chr2 199328008 199328296 -51359558 + L2 LINE L2 2921 3232 -81 2387 192 68 31 chr2 199328937 199329479 -51358375 + MER68 LTR ERV1 1 562 0 2987 9 0 0 chr2 199329757 199330101 -51357753 - L1PA3 LINE L1 -546 5609 5266 4613 28 2 0 chr2 199330101 199330640 -51357214 + L1PA3 LINE L1 5611 6152 -3 434 236 35 35 chr2 199331141 199331285 -51356569 + MIR SINE MIR 60 203 -59 266 232 91 81 chr2 199331969 199332068 -51355786 + MIR SINE MIR 8 107 -155 1852 128 69 28 chr2 199332435 199332795 -51355059 + THE1C LTR MaLR 1 375 0 252 0 0 0 chr2 199333247 199333275 -51354579 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 27 0 0 0 chr2 199333796 199333823 -51354031 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chr2 199334085 199334120 -51353734 + AT_rich Low_complexity Low_complexity 1 35 0 6977 56 8 0 chr2 199335039 199336163 -51351691 + L1PA6 LINE L1 5020 6150 -4 1120 157 11 0 chr2 199336285 199336476 -51351378 - L1MB5 LINE L1 -184 5990 5798 * 2766 206 42 8 chr2 199336474 199337294 -51350560 - L1MB5 LINE L1 -656 5524 4674 1261 263 90 33 chr2 199337384 199338072 -51349782 + HAL1 LINE L1 910 1636 -871 930 140 40 104 chr2 199338259 199338397 -51349457 + MER2 DNA MER2_type 138 258 -87 4435 146 10 0 chr2 199338397 199339116 -51348738 - L1PA16 LINE L1 -8 6158 5433 930 140 40 104 chr2 199339116 199339199 -51348655 + MER2 DNA MER2_type 258 345 0 467 302 85 11 chr2 199340607 199340796 -51347058 + MIR SINE MIR 14 216 -46 215 383 109 20 chr2 199340915 199341116 -51346738 - MIR SINE MIR -36 226 8 22 0 0 0 chr2 199341826 199341848 -51346006 + AT_rich Low_complexity Low_complexity 1 22 0 184 280 0 0 chr2 199341992 199342042 -51345812 - L2 LINE L2 0 3313 3264 278 270 134 16 chr2 199342267 199342394 -51345460 - MIR SINE MIR -62 146 16 260 327 77 24 chr2 199342402 199342570 -51345284 + MER5A DNA MER1_type 6 182 -7 31 58 0 0 chr2 199343054 199343106 -51344748 + AT_rich Low_complexity Low_complexity 1 52 0 15035 132 18 12 chr2 199343482 199344651 -51343203 - Tigger1 DNA MER2_type -1 2417 1257 1240 121 121 5 chr2 199344651 199344857 -51342997 - MER30 DNA MER1_type 0 230 1 15035 132 18 12 chr2 199344857 199346089 -51341765 - Tigger1 DNA MER2_type -1161 1257 1 685 345 70 21 chr2 199346106 199346535 -51341319 + LTR16A LTR ERVL 1 450 0 446 315 176 24 chr2 199346535 199347109 -51340745 - HAL1 LINE L1 -190 2317 1657 300 288 142 32 chr2 199347324 199347761 -51340093 - HAL1 LINE L1 -1273 1234 750 778 298 83 17 chr2 199347934 199348522 -51339332 - L1M4 LINE L1 -2391 3755 3129 1183 265 71 34 chr2 199349419 199349913 -51337941 - LTR33A LTR ERVL -2 521 10 2528 163 23 3 chr2 199350295 199350968 -51336886 + L1P4 LINE L1 4826 5515 -650 22 35 0 0 chr2 199351492 199351521 -51336333 + AT_rich Low_complexity Low_complexity 1 29 0 560 259 102 24 chr2 199351670 199352370 -51335484 - L1ME3A LINE L1 -8 6556 5732 * 1423 290 69 13 chr2 199352340 199353123 -51334731 - L1ME3A LINE L1 -1605 4935 4109 419 327 70 5 chr2 199353140 199353354 -51334500 - L1ME3A LINE L1 -2948 3592 3365 345 311 59 56 chr2 199353491 199353864 -51333990 - L1ME3A LINE L1 -4594 2127 1754 7633 21 1 0 chr2 199353868 199354761 -51333093 - L1PA4 LINE L1 -3 6152 5259 405 327 34 38 chr2 199354763 199355210 -51332644 - L1ME3A LINE L1 -4829 1711 1267 22 0 0 0 chr2 199355377 199355399 -51332455 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr2 199355908 199355933 -51331921 + AT_rich Low_complexity Low_complexity 1 25 0 269 276 126 98 chr2 199356582 199356828 -51331026 - MIR SINE MIR -6 256 4 742 203 0 0 chr2 199357124 199357257 -51330597 - FRAM SINE Alu -33 143 11 303 275 33 22 chr2 199357369 199357460 -51330394 - L1MEc LINE L1 -4151 2245 2154 372 88 0 0 chr2 199358181 199358238 -51329616 + (CA)n Simple_repeat Simple_repeat 1 57 0 43 35 0 0 chr2 199359969 199360026 -51327828 + AT_rich Low_complexity Low_complexity 1 57 0 535 15 0 0 chr2 199360498 199360565 -51327289 + L1PA3 LINE L1 6086 6152 -3 243 88 0 0 chr2 199361115 199361149 -51326705 + (TG)n Simple_repeat Simple_repeat 1 34 0 22 35 0 0 chr2 199361263 199361292 -51326562 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 199361583 199361611 -51326243 + AT_rich Low_complexity Low_complexity 1 28 0 243 310 0 10 chr2 199361728 199361828 -51326026 + (TA)n Simple_repeat Simple_repeat 2 100 0 210 71 0 0 chr2 199361852 199361880 -51325974 + (TATATG)n Simple_repeat Simple_repeat 2 29 0 275 189 19 0 chr2 199362089 199362142 -51325712 + MLT1J LTR MaLR 312 365 -146 502 298 19 25 chr2 199362292 199362450 -51325404 + L1MEd LINE L1 436 592 -5527 23 0 0 0 chr2 199362487 199362510 -51325344 + AT_rich Low_complexity Low_complexity 1 23 0 2770 200 14 33 chr2 199362679 199363268 -51324586 + MLT2B3 LTR ERVL 1 512 -3 272 288 75 25 chr2 199363272 199363550 -51324304 + L1MEd LINE L1 810 1101 -5018 230 274 110 20 chr2 199363566 199363793 -51324061 + L1MEd LINE L1 1117 1416 -4755 272 276 8 57 chr2 199365176 199365299 -51322555 + L1M4 LINE L1 3895 4011 -2135 6057 161 46 12 chr2 199365416 199366580 -51321274 + Tigger3b DNA MER2_type 2 1205 -26 1984 141 55 42 chr2 199366596 199367131 -51320723 - MLT2A2 LTR ERVL -10 544 1 225 255 113 9 chr2 199367241 199367347 -51320507 + L1M4 LINE L1 4272 4388 -1758 861 153 27 20 chr2 199367347 199367497 -51320357 + AluJo SINE Alu 84 234 -78 256 91 0 0 chr2 199367498 199367531 -51320323 + LTR57-int LTR ERVL 1540 1572 -3771 1077 196 76 68 chr2 199367588 199368282 -51319572 + MER65A-int LTR ERV1 1584 3659 -3012 5908 98 16 11 chr2 199368340 199368952 -51318902 + L1PA13 LINE L1 5142 5761 -402 2369 152 18 0 chr2 199368952 199369348 -51318506 - MER57A LTR ERV1 0 403 1 5908 98 16 11 chr2 199369348 199369753 -51318101 + L1PA13 LINE L1 5761 6163 0 1228 203 33 23 chr2 199369769 199370069 -51317785 + MER65A-int LTR ERV1 3521 3823 -1113 294 122 143 0 chr2 199370156 199370205 -51317649 + MER65A-int LTR ERV1 5337 5392 -939 1889 251 60 5 chr2 199370217 199370651 -51317203 + MER65A-int LTR ERV1 3605 4062 -809 1832 248 32 9 chr2 199370646 199371110 -51316744 + MER65A-int LTR ERV1 4397 4871 0 * 2385 154 36 25 chr2 199371110 199371550 -51316304 + MER65A LTR ERV1 1 445 0 1156 282 140 19 chr2 199371611 199372075 -51315779 - LTR50 LTR ERVL -275 520 1 183 260 65 65 chr2 199373235 199373312 -51314542 + L2 LINE L2 3237 3313 0 2286 96 0 0 chr2 199373389 199373682 -51314172 + AluSg SINE Alu 1 293 -17 182 213 131 16 chr2 199375011 199375072 -51312782 + L2 LINE L2 3246 3313 0 1945 89 0 73 chr2 199375314 199375627 -51312227 - AluY SINE Alu -17 294 5 351 339 156 31 chr2 199378197 199378486 -51309368 + L2 LINE L2 2988 3312 -1 6613 161 50 26 chr2 199378653 199382831 -51305023 + L1PA10 LINE L1 1 4074 -2409 2219 117 3 0 chr2 199382831 199383139 -51304715 + AluSq SINE Alu 1 309 -4 6613 161 50 26 chr2 199383139 199384017 -51303837 + L1PA10 LINE L1 4074 4929 -1554 1285 123 5 0 chr2 199384017 199384204 -51303650 + L1PA7 LINE L1 5957 6144 -10 6613 161 50 26 chr2 199384204 199385236 -51302618 + L1PA10 LINE L1 4929 6471 -12 36 0 0 0 chr2 199385240 199385276 -51302578 + AT_rich Low_complexity Low_complexity 1 36 0 923 78 7 26 chr2 199385448 199385602 -51302252 + (GGAAA)n Simple_repeat Simple_repeat 2 152 0 353 360 59 22 chr2 199386435 199386707 -51301147 - L2 LINE L2 -181 3132 2851 604 320 32 59 chr2 199386790 199386842 -51301012 - L2 LINE L2 -684 2630 2578 1766 184 42 11 chr2 199386842 199387196 -51300658 + MLT1A1 LTR MaLR 1 365 0 604 320 32 59 chr2 199387196 199387549 -51300305 - L2 LINE L2 -736 2578 2236 191 173 19 0 chr2 199387745 199387797 -51300057 + CT-rich Low_complexity Low_complexity 1 53 0 1120 199 141 60 chr2 199391446 199391712 -51296142 + Charlie4a DNA MER1_type 39 282 -1679 2304 104 0 0 chr2 199391712 199392010 -51295844 + AluSq SINE Alu 1 298 -15 1120 199 141 60 chr2 199392010 199392119 -51295735 + Charlie4a DNA MER1_type 282 381 -1580 1972 198 31 55 chr2 199392119 199392595 -51295259 - MLT1C LTR MaLR -2 465 1 1120 199 141 60 chr2 199392595 199392650 -51295204 + Charlie4a DNA MER1_type 381 505 -3 376 253 75 91 chr2 199392650 199392915 -51294939 + L1ME4a LINE L1 5823 6083 -38 1824 164 146 11 chr2 199393164 199393535 -51294319 + MSTA LTR MaLR 1 421 -7 415 298 66 35 chr2 199394296 199394524 -51293330 + MIR SINE MIR 28 262 0 808 102 0 24 chr2 199396276 199396403 -51291451 + L1MA1 LINE L1 6179 6302 0 2128 183 23 68 chr2 199396490 199397019 -51290835 - LTR22 LTR ERVK -4 505 1 24 0 0 0 chr2 199397034 199397058 -51290796 + AT_rich Low_complexity Low_complexity 1 24 0 342 262 11 6 chr2 199398148 199398327 -51289527 + CT-rich Low_complexity Low_complexity 1 180 0 387 286 51 29 chr2 199398436 199398611 -51289243 - MIR SINE MIR 0 262 84 255 31 0 0 chr2 199398882 199398914 -51288940 + (TC)n Simple_repeat Simple_repeat 1 32 0 245 271 0 14 chr2 199398914 199399007 -51288847 + (CATATA)n Simple_repeat Simple_repeat 1 91 0 210 234 26 104 chr2 199399441 199399518 -51288336 + MIR SINE MIR 2 72 -190 22 0 0 0 chr2 199399603 199399625 -51288229 + AT_rich Low_complexity Low_complexity 1 22 0 24 77 0 0 chr2 199400930 199400982 -51286872 + AT_rich Low_complexity Low_complexity 1 52 0 318 185 70 57 chr2 199401205 199401362 -51286492 + L1ME4a LINE L1 5725 5883 -238 318 279 60 20 chr2 199401372 199401466 -51286388 + L1ME4a LINE L1 5848 5937 -184 2239 166 61 15 chr2 199401466 199401875 -51285979 - MSTA LTR MaLR 0 428 1 318 279 60 20 chr2 199401875 199401981 -51285873 + L1ME4a LINE L1 5937 6056 -65 1164 38 0 0 chr2 199401981 199402113 -51285741 - AluY SINE Alu -179 132 1 25 0 0 0 chr2 199402178 199402203 -51285651 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr2 199402296 199402333 -51285521 + AT_rich Low_complexity Low_complexity 1 37 0 317 204 235 10 chr2 199402580 199402678 -51285176 - ORSL DNA AcHobo -7 268 149 772 310 139 75 chr2 199402990 199403524 -51284330 + L3 LINE CR1 579 1078 -499 378 0 0 0 chr2 199403524 199403566 -51284288 + (TG)n Simple_repeat Simple_repeat 2 43 0 772 310 139 75 chr2 199403566 199403611 -51284243 + L3 LINE CR1 1078 1119 -458 306 0 0 0 chr2 199403611 199403645 -51284209 + (TG)n Simple_repeat Simple_repeat 2 35 0 772 310 139 75 chr2 199403645 199403979 -51283875 + L3 LINE CR1 1119 1551 -26 262 329 0 0 chr2 199404772 199404848 -51283006 + MIR3 SINE MIR 124 199 -9 226 310 211 7 chr2 199406163 199406305 -51281549 + MER5A DNA MER1_type 1 171 -18 6734 122 50 34 chr2 199407725 199408936 -51278918 - Tigger3b DNA MER2_type 0 1231 1 197 263 35 0 chr2 199409277 199409334 -51278520 - L2 LINE L2 0 3272 3214 270 333 69 11 chr2 199409592 199409679 -51278175 - MIR SINE MIR -98 110 19 325 303 98 0 chr2 199409733 199409855 -51277999 + MARNA DNA Mariner 93 226 -360 250 307 13 27 chr2 199409859 199409934 -51277920 - L2 LINE L2 -5 3267 3194 648 213 91 14 chr2 199410042 199410263 -51277591 - HsTC2 DNA Tc2 -2 1896 1659 228 285 49 57 chr2 199410260 199410383 -51277471 - HsTC2 DNA Tc2 -1764 134 13 * 437 320 102 15 chr2 199410512 199410709 -51277145 + MIR SINE MIR 10 223 -39 22 0 0 0 chr2 199411147 199411169 -51276685 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr2 199411586 199411635 -51276219 + AT_rich Low_complexity Low_complexity 1 49 0 198 0 0 0 chr2 199411941 199411963 -51275891 + (A)n Simple_repeat Simple_repeat 1 22 0 1343 183 90 69 chr2 199412706 199413138 -51274716 + MSTB2 LTR MaLR 17 457 0 23 54 0 0 chr2 199417208 199417245 -51270609 + AT_rich Low_complexity Low_complexity 1 37 0 262 225 181 37 chr2 199417313 199417584 -51270270 - L1M4 LINE L1 -2878 3268 2959 4880 52 15 0 chr2 199417840 199418859 -51268995 + L1PA7 LINE L1 4859 5892 -262 654 291 140 57 chr2 199419343 199419813 -51268041 - LTR33 LTR ERVL 0 521 13 387 248 90 99 chr2 199419966 199420382 -51267472 - MLT1J2 LTR MaLR -22 428 15 21 36 0 0 chr2 199421246 199421274 -51266580 + AT_rich Low_complexity Low_complexity 1 28 0 595 313 190 33 chr2 199422230 199422598 -51265256 - L3b LINE CR1 -5 1578 1153 404 228 94 24 chr2 199423325 199423452 -51264402 - L2 LINE L2 -61 3252 3117 2338 101 0 9 chr2 199423487 199423815 -51264039 - LTR17 LTR ERV1 -455 325 1 2368 62 3 0 chr2 199423815 199424106 -51263748 - HERV17 LTR ERV1 0 8626 8335 300 51 0 0 chr2 199424096 199424135 -51263719 - HERV17 LTR ERV1 -1078 7548 7510 * 10943 58 19 1 chr2 199424128 199426014 -51261840 - HERV17 LTR ERV1 -2607 6019 2430 9562 83 8 15 chr2 199425999 199427319 -51260535 - HERV17 LTR ERV1 -6612 2014 704 * 228 189 57 0 chr2 199427319 199427372 -51260482 + CT-rich Low_complexity Low_complexity 2 57 0 5050 90 3 21 chr2 199427680 199428381 -51259473 - HERV17 LTR ERV1 -7935 691 4 3443 101 48 4 chr2 199428386 199428883 -51258971 - LTR17 LTR ERV1 0 780 262 1352 313 104 27 chr2 199429239 199429866 -51257988 + L3 LINE CR1 608 1282 -295 357 330 54 22 chr2 199429884 199430069 -51257785 + MIR SINE MIR 72 262 0 293 273 52 117 chr2 199430155 199430309 -51257545 + L3 LINE CR1 1434 1577 0 436 239 12 104 chr2 199430398 199430571 -51257283 - MIR SINE MIR -62 146 17 2220 106 0 0 chr2 199431924 199432216 -51255638 - AluSg SINE Alu -18 292 1 284 279 29 0 chr2 199432226 199432294 -51255560 - L2 LINE L2 -2 3311 3242 412 318 47 7 chr2 199432519 199432667 -51255187 + L2 LINE L2 1772 1925 -1389 890 122 23 0 chr2 199432672 199432803 -51255051 - MLT1D LTR MaLR -5 500 367 298 225 135 11 chr2 199432803 199432892 -51254962 + MLT1-int LTR MaLR 807 906 -465 444 192 200 32 chr2 199433039 199433164 -51254690 + MLT1-int LTR MaLR 1107 1252 -119 611 278 27 42 chr2 199433212 199433404 -51254450 - MIR SINE MIR -62 146 3 2263 106 3 0 chr2 199433780 199434091 -51253763 - AluSx SINE Alu 0 312 1 1503 206 32 45 chr2 199434237 199434616 -51253238 - MLT1A2 LTR MaLR 0 374 1 256 331 41 16 chr2 199435188 199435309 -51252545 - MIR SINE MIR -62 200 77 25 31 0 0 chr2 199436059 199436091 -51251763 + AT_rich Low_complexity Low_complexity 1 32 0 461 253 112 87 chr2 199436205 199436609 -51251245 + L1ME4a LINE L1 5313 5736 -385 2134 104 0 7 chr2 199436609 199436896 -51250958 + AluSg SINE Alu 1 285 -25 461 253 112 87 chr2 199436896 199437083 -51250771 + L1ME4a LINE L1 5736 5917 -204 342 0 0 0 chr2 199437515 199437553 -51250301 + (CA)n Simple_repeat Simple_repeat 2 39 0 2406 36 0 11 chr2 199438015 199438296 -51249558 + AluY SINE Alu 27 304 -7 1708 154 8 0 chr2 199438742 199439009 -51248845 + AluSx SINE Alu 1 269 -43 237 132 0 0 chr2 199439160 199439198 -51248656 + (A)n Simple_repeat Simple_repeat 1 38 0 222 313 0 0 chr2 199440414 199440478 -51247376 + (CA)n Simple_repeat Simple_repeat 1 64 0 423 0 0 0 chr2 199440514 199440561 -51247293 + (TA)n Simple_repeat Simple_repeat 1 47 0 414 0 0 0 chr2 199440584 199440630 -51247224 + (CA)n Simple_repeat Simple_repeat 1 46 0 2062 115 21 3 chr2 199440716 199441004 -51246850 + AluSg SINE Alu 1 293 -17 228 35 0 0 chr2 199441015 199441044 -51246810 + (TA)n Simple_repeat Simple_repeat 1 29 0 261 0 0 0 chr2 199441890 199441919 -51245935 + (TG)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr2 199443039 199443061 -51244793 + AT_rich Low_complexity Low_complexity 1 22 0 2238 91 14 0 chr2 199443455 199443752 -51244102 + AluY SINE Alu 1 301 -10 2910 54 16 0 chr2 199443851 199444222 -51243632 + L1PA8 LINE L1 5786 6162 -10 1558 165 35 8 chr2 199444287 199444547 -51243307 + AluJb SINE Alu 1 267 -45 21 0 0 0 chr2 199445284 199445305 -51242549 + AT_rich Low_complexity Low_complexity 1 21 0 207 294 156 25 chr2 199445906 199446066 -51241788 + L2 LINE L2 2704 2884 -430 215 354 52 0 chr2 199446075 199446171 -51241683 + MIR SINE MIR 136 236 -26 2795 104 11 31 chr2 199446706 199447150 -51240704 + MER41B LTR ERV1 1 435 -200 290 202 0 33 chr2 199447271 199447356 -51240498 + MLT1B LTR MaLR 98 178 -196 225 178 0 0 chr2 199447372 199447417 -51240437 + CT-rich Low_complexity Low_complexity 1 45 0 1033 179 10 5 chr2 199447424 199447619 -51240235 + MLT1B LTR MaLR 191 386 -4 1678 271 82 10 chr2 199451661 199452163 -51235691 - MLT1G1 LTR MaLR -34 561 24 2007 161 0 10 chr2 199452163 199452474 -51235380 - AluSx SINE Alu -4 308 1 205 182 0 0 chr2 199503973 199504006 -51183848 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 225 214 0 0 chr2 199504006 199504062 -51183792 - L1MC4 LINE L1 -1339 6703 6648 329 182 27 0 chr2 199504101 199504249 -51183605 + (TA)n Simple_repeat Simple_repeat 2 153 0 25 0 0 0 chr2 199504252 199504277 -51183577 + AT_rich Low_complexity Low_complexity 1 25 0 2307 90 10 0 chr2 199504819 199505119 -51182735 - AluSc SINE Alu -6 303 1 1347 197 28 39 chr2 199505588 199505872 -51181982 + AluJb SINE Alu 1 281 -31 2030 185 29 22 chr2 199506189 199506600 -51181254 + MLT2D LTR ERVL 1 414 0 2498 79 0 0 chr2 199507202 199507507 -51180347 + AluY SINE Alu 5 309 -2 5237 158 29 12 chr2 199508525 199509168 -51178686 - L1MC1 LINE L1 0 6333 5660 1849 172 125 10 chr2 199509168 199509552 -51178302 + MSTA LTR MaLR 1 428 0 5237 158 29 12 chr2 199509552 199509905 -51177949 - L1MC1 LINE L1 -673 5660 5315 2148 119 0 10 chr2 199509924 199510227 -51177627 - AluSx SINE Alu -12 300 1 182 31 0 62 chr2 199511323 199511355 -51176499 + (CAAAAA)n Simple_repeat Simple_repeat 4 33 0 268 218 40 30 chr2 199511730 199511757 -51176097 - MER112 DNA MER1_type -101 159 134 1880 100 48 138 chr2 199511757 199512157 -51175697 - THE1B LTR MaLR 0 364 1 268 218 40 30 chr2 199512157 199512230 -51175624 - MER112 DNA MER1_type -126 134 58 1596 172 42 50 chr2 199512420 199512798 -51175056 + THE1C LTR MaLR 1 375 0 351 184 11 48 chr2 199513361 199513469 -51174385 - L1ME2 LINE L1 -5 6161 6055 1450 222 18 3 chr2 199513525 199513863 -51173991 - L1ME2 LINE L1 -339 5827 5485 346 128 7 203 chr2 199513871 199513919 -51173935 - MLT2B1 LTR ERVL 0 520 464 531 0 0 0 chr2 199513919 199513978 -51173876 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 346 128 7 203 chr2 199513978 199514077 -51173777 - MLT2B1 LTR ERVL -56 464 402 603 237 61 50 chr2 199514358 199514556 -51173298 - MIR SINE MIR -19 243 44 1637 168 54 64 chr2 199514957 199515362 -51172492 - MER21B LTR ERV1 -2 861 461 2088 93 31 0 chr2 199515362 199515653 -51172201 + AluSx SINE Alu 1 300 -12 2403 100 19 0 chr2 199515953 199516313 -51171541 + MER51B-int LTR ERV1 6782 7148 -389 634 94 10 0 chr2 199516313 199516409 -51171445 + LTR54B LTR ERV1 3 99 -399 2001 159 15 18 chr2 199516409 199516799 -51171055 + MER51B-int LTR ERV1 7428 7816 0 1686 127 19 60 chr2 199516800 199517116 -51170738 + MER51B LTR ERV1 1 303 -74 900 210 22 6 chr2 199517122 199517303 -51170551 - MER21B LTR ERV1 -390 473 290 309 252 16 0 chr2 199517324 199517439 -51170415 - MER21B LTR ERV1 -407 198 41 304 253 38 0 chr2 199517469 199517548 -51170306 - MER21B LTR ERV1 -773 90 9 12628 190 85 33 chr2 199517629 199520521 -51167333 + L1M2 LINE L1 2 3046 -3802 2042 133 24 35 chr2 199520521 199520897 -51166957 - THE1C LTR MaLR 0 375 4 12628 190 85 33 chr2 199520897 199520944 -51166910 + L1M2 LINE L1 3046 3089 -3759 1643 89 38 27 chr2 199520944 199521181 -51166673 + L1MA4A LINE L1 6008 6250 -53 1822 166 7 7 chr2 199521181 199521476 -51166378 + AluJo SINE Alu 1 295 -17 1643 89 38 27 chr2 199521476 199521530 -51166324 + L1MA4A LINE L1 6250 6302 -1 433 313 134 10 chr2 199521694 199521895 -51165959 - L3b LINE CR1 -255 1328 1103 272 390 51 6 chr2 199521985 199522162 -51165692 + MIR3 SINE MIR 24 208 0 1255 82 0 33 chr2 199523109 199523293 -51164561 + L1PA8 LINE L1 5995 6172 0 1042 151 19 0 chr2 199525588 199525747 -51162107 + FRAM SINE Alu 1 161 -15 1611 123 71 32 chr2 199526231 199526540 -51161314 + THE1C LTR MaLR 55 375 0 2217 118 0 0 chr2 199527392 199527689 -51160165 + AluSx SINE Alu 1 297 -15 309 51 0 0 chr2 199527694 199527733 -51160121 + (CA)n Simple_repeat Simple_repeat 2 40 0 2375 84 0 10 chr2 199529330 199529641 -51158213 - AluSc SINE Alu -1 308 1 273 347 10 0 chr2 199529681 199529779 -51158075 + MER5A DNA MER1_type 8 106 -83 188 348 96 0 chr2 199530094 199530229 -51157625 + L2 LINE L2 1890 2037 -1277 532 191 154 7 chr2 199531224 199531360 -51156494 - MER96B DNA MER1_type? -261 156 1 1686 173 17 7 chr2 199531395 199531690 -51156164 + AluJo SINE Alu 1 298 -14 38 0 0 0 chr2 199531732 199531770 -51156084 + AT_rich Low_complexity Low_complexity 1 38 0 324 372 30 6 chr2 199531792 199531956 -51155898 - L1MC/D LINE L1 -2376 5432 5265 400 290 66 27 chr2 199532758 199532941 -51154913 - L1MC/D LINE L1 -1006 5140 4951 1822 49 0 18 chr2 199532952 199533178 -51154676 + AluY SINE Alu 83 304 -7 191 274 143 0 chr2 199533323 199533407 -51154447 + L2 LINE L2 2626 2721 -593 215 326 68 45 chr2 199533487 199533619 -51154235 + L3 LINE CR1 1369 1503 -74 22 56 0 0 chr2 199533667 199533703 -51154151 + AT_rich Low_complexity Low_complexity 1 36 0 1744 164 7 4 chr2 199533916 199534197 -51153657 - AluJb SINE Alu -29 283 2 21 0 0 0 chr2 199534409 199534430 -51153424 + AT_rich Low_complexity Low_complexity 1 21 0 274 0 48 24 chr2 199536417 199536459 -51151395 + (TTTTTA)n Simple_repeat Simple_repeat 1 43 0 6508 50 2 10 chr2 199536459 199537255 -51150599 - SVA Other Other -1 1385 596 787 316 120 3 chr2 199537656 199537972 -51149882 + LTR16A LTR ERVL 94 446 -4 433 198 88 11 chr2 199538154 199538245 -51149609 + MER5B DNA MER1_type 76 173 -5 2283 263 157 30 chr2 199538332 199539224 -51148630 + L2 LINE L2 1436 2480 -834 1940 163 0 3 chr2 199539224 199539531 -51148323 - AluJb SINE Alu -6 306 1 2283 263 157 30 chr2 199539531 199539675 -51148179 + L2 LINE L2 2480 2604 -710 185 0 40 0 chr2 199539915 199539940 -51147914 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 925 177 17 95 chr2 199541119 199541351 -51146503 - MER20 DNA MER1_type 0 219 6 1447 187 70 21 chr2 199541564 199541891 -51145963 + MLT2D LTR ERVL 64 414 0 21 40 0 40 chr2 199542805 199542823 -51145031 + AT_rich Low_complexity Low_complexity 1 18 -30 1842 123 51 0 chr2 199542823 199543099 -51144755 + AluSx SINE Alu 1 290 -22 21 40 0 40 chr2 199543099 199543130 -51144724 + AT_rich Low_complexity Low_complexity 18 48 0 762 100 0 0 chr2 199543138 199543238 -51144616 + U6 snRNA snRNA 1 100 -7 23 54 0 0 chr2 199543243 199543280 -51144574 + AT_rich Low_complexity Low_complexity 1 37 0 2057 218 25 39 chr2 199543347 199543861 -51143993 + L1ME3 LINE L1 5611 6117 -45 2409 88 3 0 chr2 199544165 199544470 -51143384 - AluSp SINE Alu -7 306 1 550 221 30 17 chr2 199544473 199544624 -51143230 - MLT1E2 LTR MaLR -8 618 378 6296 113 166 55 chr2 199544624 199546072 -51141782 + pTR5 LTR ERV1 767 2437 -1 1838 214 113 20 chr2 199546072 199546530 -51141324 - MLT1E2 LTR MaLR -125 501 1 1371 194 57 14 chr2 199546814 199547097 -51140757 + AluJb SINE Alu 1 295 -17 1199 150 0 42 chr2 199547288 199547501 -51140353 - AluJb SINE Alu -24 288 85 340 250 70 52 chr2 199547716 199547888 -51139966 - MIR SINE MIR -54 208 34 2293 101 0 3 chr2 199548425 199548723 -51139131 + AluSx SINE Alu 1 297 -15 1855 132 8 92 chr2 199548723 199549045 -51138809 + MER4B LTR ERV1 272 561 -49 1594 187 0 24 chr2 199549045 199549339 -51138515 + AluJo SINE Alu 1 287 -25 1855 132 8 92 chr2 199549339 199549386 -51138468 + MER4B LTR ERV1 561 610 0 1991 102 0 32 chr2 199549423 199549706 -51138148 + AluSx SINE Alu 38 311 -1 3329 161 24 34 chr2 199549801 199550422 -51137432 + LTR35 LTR ERV1 1 615 -3 21 0 0 0 chr2 199551668 199551689 -51136165 + AT_rich Low_complexity Low_complexity 1 21 0 8124 41 4 1 chr2 199552106 199558198 -51129656 + L1PA3 LINE L1 1 6155 0 2252 93 3 3 chr2 199558503 199558794 -51129060 + AluSg1 SINE Alu 1 291 -18 333 275 58 33 chr2 199559394 199559514 -51128340 + MLT1K LTR MaLR 140 262 -326 3288 216 80 9 chr2 199559759 199560649 -51127205 - L1ME1 LINE L1 -4 6162 5218 302 273 70 56 chr2 199560724 199560867 -51126987 - MIR SINE MIR -38 224 80 192 97 0 0 chr2 199561484 199561515 -51126339 + (TC)n Simple_repeat Simple_repeat 2 32 0 339 25 0 0 chr2 199561515 199561555 -51126299 + (CA)n Simple_repeat Simple_repeat 1 40 0 299 311 0 10 chr2 199561685 199561788 -51126066 + MIR3 SINE MIR 97 198 -10 200 233 0 0 chr2 199562944 199562987 -51124867 + A-rich Low_complexity Low_complexity 1 43 0 401 261 36 41 chr2 199564838 199564980 -51122874 + MIR SINE MIR 17 151 -63 684 240 188 0 chr2 199565058 199565266 -51122588 - MIR SINE MIR -15 247 1 1387 195 0 0 chr2 199566747 199566983 -51120871 + AluJb SINE Alu 1 236 -76 610 318 31 28 chr2 199567016 199567271 -51120583 - MIR SINE MIR -6 256 1 2504 260 20 24 chr2 199567399 199568099 -51119755 + L1MEc LINE L1 204 900 -5663 292 217 178 8 chr2 199568095 199568219 -51119635 + L1MEc LINE L1 1265 1471 -4901 * 1007 174 23 0 chr2 199568221 199568393 -51119461 + AluJb SINE Alu 117 292 -20 2023 221 51 75 chr2 199568396 199568649 -51119205 + L1MEc LINE L1 1548 1806 -4757 805 169 7 29 chr2 199568649 199568785 -51119069 - FLAM_C SINE Alu 0 133 1 2023 221 51 75 chr2 199568785 199568945 -51118909 + L1MEc LINE L1 1806 1968 -4595 2202 205 88 4 chr2 199568945 199569423 -51118431 + MLT2B1 LTR ERVL 3 520 0 2023 221 51 75 chr2 199569423 199569672 -51118182 + L1MEc LINE L1 1968 2192 -4371 1749 181 0 13 chr2 199569672 199569970 -51117884 + AluJo SINE Alu 1 294 -18 2023 221 51 75 chr2 199569970 199570074 -51117780 + L1MEc LINE L1 2192 2297 -4266 3044 151 4 8 chr2 199570074 199570576 -51117278 + L1MB4 LINE L1 5681 6180 0 2162 127 7 0 chr2 199570991 199571291 -51116563 - AluSx SINE Alu -10 302 1 25 31 0 0 chr2 199571649 199571681 -51116173 + AT_rich Low_complexity Low_complexity 1 32 0 2541 197 134 5 chr2 199571774 199572364 -51115490 - MLT1A1-int LTR MaLR -1069 666 1 1619 206 41 14 chr2 199572364 199572709 -51115145 - MLT1A1 LTR MaLR 0 365 12 248 284 64 9 chr2 199572805 199572914 -51114940 - MIR SINE MIR 0 262 148 675 146 0 0 chr2 199572914 199573017 -51114837 + L1PA15 LINE L1 5937 6039 -126 2101 120 3 0 chr2 199573017 199573309 -51114545 + AluSq SINE Alu 1 293 -20 808 169 94 0 chr2 199573324 199573484 -51114370 + L1PA15 LINE L1 5991 6165 0 348 313 61 9 chr2 199573628 199573743 -51114111 - L2 LINE L2 -4 3268 3148 2451 90 3 0 chr2 199574276 199574587 -51113267 + AluSp SINE Alu 1 312 -1 2233 118 0 0 chr2 199574609 199574915 -51112939 + AluSx SINE Alu 1 306 -6 1462 209 0 43 chr2 199575113 199575439 -51112415 + AluJb SINE Alu 1 312 0 466 171 0 0 chr2 199575475 199575551 -51112303 - Alu SINE Alu -16 294 219 4692 134 48 39 chr2 199575602 199576959 -51110895 - pTR5 LTR ERV1 0 2438 744 1803 138 0 0 chr2 199576959 199577213 -51110641 + AluSx SINE Alu 27 280 -32 234 0 0 0 chr2 199577213 199577239 -51110615 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 192 302 163 0 chr2 199577286 199577458 -51110396 - L2 LINE L2 -290 3023 2824 2766 177 180 36 chr2 199577466 199578150 -51109704 - LTR1B LTR ERV1 -32 794 13 2485 268 64 23 chr2 199578156 199578948 -51108906 - L2 LINE L2 -420 2894 2070 14469 120 29 47 chr2 199579754 199581301 -51106553 - Tigger1 DNA MER2_type -11 2407 833 2274 100 10 0 chr2 199581301 199581600 -51106254 - AluSx SINE Alu -10 302 1 14469 120 29 47 chr2 199581600 199582101 -51105753 - Tigger1 DNA MER2_type -1585 833 407 2168 129 6 3 chr2 199582101 199582412 -51105442 - AluSx SINE Alu 0 312 1 14469 120 29 47 chr2 199582412 199582748 -51105106 - Tigger1 DNA MER2_type -2011 407 66 998 98 52 58 chr2 199582717 199582891 -51104963 - Tigger1 DNA MER2_type -722 1696 1524 * 472 181 43 21 chr2 199582944 199582997 -51104857 - Tigger1 DNA MER2_type -2322 96 39 2200 117 0 0 chr2 199582997 199583296 -51104558 + AluSx SINE Alu 1 299 -13 472 181 43 21 chr2 199583296 199583336 -51104518 - Tigger1 DNA MER2_type -2379 39 1 1296 99 0 104 chr2 199583492 199583738 -51104116 + AluY SINE Alu 88 310 0 1759 147 14 0 chr2 199583825 199584104 -51103750 - AluJb SINE Alu -13 299 17 2076 92 4 0 chr2 199584105 199584377 -51103477 + AluSp SINE Alu 31 303 -10 292 305 102 31 chr2 199584876 199585004 -51102850 + MIR SINE MIR 49 185 -77 359 315 46 8 chr2 199585480 199585610 -51102244 + L2 LINE L2 3179 3313 0 2200 118 3 0 chr2 199585918 199586214 -51101640 - AluSc SINE Alu -8 301 5 2153 112 10 3 chr2 199586426 199586722 -51101132 + AluSq SINE Alu 1 298 -15 243 335 45 52 chr2 199586722 199586877 -51100977 + MIR3 SINE MIR 48 201 -7 1293 163 103 70 chr2 199587001 199587302 -51100552 + AluSx SINE Alu 1 311 -1 1626 237 51 24 chr2 199587635 199587810 -51100044 + MLT1C LTR MaLR 3 172 -295 4509 106 14 5 chr2 199587810 199588435 -51099419 + L1PA14 LINE L1 5529 6159 -2 1626 237 51 24 chr2 199588435 199588711 -51099143 + MLT1C LTR MaLR 172 466 -1 189 74 0 0 chr2 199589474 199589501 -51098353 + (CA)n Simple_repeat Simple_repeat 2 28 0 1871 149 0 50 chr2 199589642 199589965 -51097889 - AluJb SINE Alu -5 307 1 210 332 156 37 chr2 199590223 199590518 -51097336 - L2 LINE L2 -850 2464 2135 * 675 260 204 0 chr2 199590507 199590703 -51097151 + MIR SINE MIR 12 247 -15 2281 110 3 0 chr2 199590934 199591243 -51096611 + AluSx SINE Alu 2 311 -1 244 338 113 8 chr2 199591703 199591836 -51096018 + MER5A DNA MER1_type 24 170 -19 202 319 14 14 chr2 199591783 199591855 -51095999 - MER5A DNA MER1_type -106 83 12 * 465 222 71 0 chr2 199592004 199592103 -51095751 - MER5A DNA MER1_type -40 149 44 219 217 0 0 chr2 199592205 199592251 -51095603 + C-rich Low_complexity Low_complexity 1 46 0 2103 121 3 13 chr2 199592385 199592683 -51095171 - AluSx SINE Alu -17 295 1 756 189 71 94 chr2 199592759 199592971 -51094883 + MER3 DNA MER1_type 2 208 -1 1374 179 73 7 chr2 199593062 199593521 -51094333 + MER34 LTR ERV1 11 542 0 2425 80 3 0 chr2 199594297 199594599 -51093255 + AluSp SINE Alu 1 303 -10 3003 182 71 60 chr2 199595385 199596104 -51091750 - LTR8A LTR ERV1 0 727 1 787 316 120 3 chr2 199596564 199596880 -51090974 + LTR16A LTR ERVL 94 446 -4 433 198 88 11 chr2 199597062 199597153 -51090701 + MER5B DNA MER1_type 76 173 -5 2283 263 157 30 chr2 199597240 199598132 -51089722 + L2 LINE L2 1436 2480 -834 1940 163 0 3 chr2 199598132 199598439 -51089415 - AluJb SINE Alu -6 306 1 2283 263 157 30 chr2 199598439 199598583 -51089271 + L2 LINE L2 2480 2604 -710 185 0 40 0 chr2 199598823 199598848 -51089006 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 925 177 17 95 chr2 199600027 199600259 -51087595 - MER20 DNA MER1_type 0 219 6 1447 187 70 21 chr2 199600472 199600799 -51087055 + MLT2D LTR ERVL 64 414 0 21 40 0 40 chr2 199601713 199601731 -51086123 + AT_rich Low_complexity Low_complexity 1 18 -30 1842 123 51 0 chr2 199601731 199602007 -51085847 + AluSx SINE Alu 1 290 -22 21 40 0 40 chr2 199602007 199602038 -51085816 + AT_rich Low_complexity Low_complexity 18 48 0 762 100 0 0 chr2 199602046 199602146 -51085708 + U6 snRNA snRNA 1 100 -7 23 54 0 0 chr2 199602151 199602188 -51085666 + AT_rich Low_complexity Low_complexity 1 37 0 2057 218 25 39 chr2 199602255 199602769 -51085085 + L1ME3 LINE L1 5611 6117 -45 2338 92 7 0 chr2 199603073 199603377 -51084477 - AluSp SINE Alu -7 306 1 550 221 30 17 chr2 199603380 199603531 -51084323 - MLT1E2 LTR MaLR -8 618 378 6327 110 168 56 chr2 199603531 199604975 -51082879 + pTR5 LTR ERV1 767 2437 -1 1838 214 113 20 chr2 199604975 199605433 -51082421 - MLT1E2 LTR MaLR -125 501 1 1371 194 57 14 chr2 199605717 199606000 -51081854 + AluJb SINE Alu 1 295 -17 1199 150 0 42 chr2 199606191 199606404 -51081450 - AluJb SINE Alu -24 288 85 340 250 70 52 chr2 199606619 199606791 -51081063 - MIR SINE MIR -54 208 34 2293 101 0 3 chr2 199607328 199607626 -51080228 + AluSx SINE Alu 1 297 -15 1855 132 8 92 chr2 199607626 199607948 -51079906 + MER4B LTR ERV1 272 561 -49 1594 187 0 24 chr2 199607948 199608242 -51079612 + AluJo SINE Alu 1 287 -25 1855 132 8 92 chr2 199608242 199608289 -51079565 + MER4B LTR ERV1 561 610 0 1991 102 0 32 chr2 199608326 199608609 -51079245 + AluSx SINE Alu 38 311 -1 3329 161 24 34 chr2 199608704 199609325 -51078529 + LTR35 LTR ERV1 1 615 -3 21 0 0 0 chr2 199610571 199610592 -51077262 + AT_rich Low_complexity Low_complexity 1 21 0 2239 55 0 7 chr2 199611066 199611337 -51076517 - AluSp SINE Alu -44 269 1 1416 185 89 0 chr2 199611574 199611844 -51076010 - AluJb SINE Alu -18 294 1 614 250 202 11 chr2 199614218 199614490 -51073364 - L2 LINE L2 -1 3312 2989 900 296 48 75 chr2 199614543 199614868 -51072986 + L2 LINE L2 2155 2464 -850 2194 89 13 30 chr2 199614868 199615171 -51072683 + AluY SINE Alu 2 299 -12 900 296 48 75 chr2 199615171 199615328 -51072526 + L2 LINE L2 2464 2624 -690 1531 171 25 32 chr2 199615504 199615785 -51072069 - AluJo SINE Alu -22 290 12 285 29 0 0 chr2 199615864 199615898 -51071956 + (TG)n Simple_repeat Simple_repeat 1 34 0 25 0 0 0 chr2 199615905 199615930 -51071924 + AT_rich Low_complexity Low_complexity 1 25 0 1389 198 143 0 chr2 199615961 199616467 -51071387 - MER21B LTR ERV1 -264 599 1 2124 107 11 0 chr2 199616667 199616948 -51070906 + AluSx SINE Alu 1 284 -28 210 105 0 0 chr2 199616948 199616986 -51070868 + (TA)n Simple_repeat Simple_repeat 2 39 0 23 33 0 0 chr2 199617016 199617046 -51070808 + AT_rich Low_complexity Low_complexity 1 30 0 1999 142 0 14 chr2 199617653 199617949 -51069905 - AluJb SINE Alu -16 296 5 2297 88 3 28 chr2 199618051 199618368 -51069486 - AluSx SINE Alu -3 309 1 1708 197 137 87 chr2 199619040 199619756 -51068098 - LTR1B LTR ERV1 -74 752 1 23 0 0 0 chr2 199620149 199620172 -51067682 + AT_rich Low_complexity Low_complexity 1 23 0 960 243 158 48 chr2 199620378 199620526 -51067328 - MLT1L LTR MaLR 0 615 485 2044 134 0 3 chr2 199620526 199620850 -51067004 + AluSx SINE Alu 1 323 0 960 243 158 48 chr2 199620850 199621119 -51066735 - MLT1L LTR MaLR -130 485 151 893 198 114 20 chr2 199621127 199621329 -51066525 + Charlie1a DNA MER1_type 17 237 -1218 2834 188 222 24 chr2 199621365 199622225 -51065629 + Charlie1a DNA MER1_type 383 1412 -43 2397 63 0 13 chr2 199622230 199622531 -51065323 + AluY SINE Alu 1 297 -14 824 111 0 0 chr2 199622539 199622647 -51065207 + AluJb SINE Alu 26 133 -179 296 170 19 0 chr2 199622647 199622700 -51065154 + Charlie1a DNA MER1_type 1401 1454 -1 * 332 256 67 61 chr2 199622700 199622858 -51064996 - MLT1L LTR MaLR -456 159 1 271 353 78 34 chr2 199623438 199623820 -51064034 - L2 LINE L2 -927 2387 1989 25 65 0 0 chr2 199623889 199623935 -51063919 + AT_rich Low_complexity Low_complexity 1 46 0 869 161 0 0 chr2 199623935 199624053 -51063801 - FLAM_C SINE Alu -15 118 1 4354 160 44 45 chr2 199624074 199624095 -51063759 - L1MC3 LINE L1 -7 7778 7758 2351 87 7 13 chr2 199624095 199624404 -51063450 - AluSx SINE Alu -5 307 1 4354 160 44 45 chr2 199624404 199624713 -51063141 - L1MC3 LINE L1 -27 7758 7450 1749 174 20 0 chr2 199624713 199625012 -51062842 - AluJo SINE Alu -7 305 1 4354 160 44 45 chr2 199625012 199625341 -51062513 - L1MC3 LINE L1 -335 7450 7117 1779 139 61 0 chr2 199625341 199625621 -51062233 - AluSg SINE Alu -9 301 5 4354 160 44 45 chr2 199625621 199625867 -51061987 - L1MC3 LINE L1 -668 7117 6872 431 306 95 90 chr2 199626733 199627132 -51060722 - L2 LINE L2 -7 3265 2865 1393 182 80 13 chr2 199627141 199627443 -51060411 - MER33 DNA MER1_type -2 322 1 2241 110 0 19 chr2 199627443 199627752 -51060102 - AluSx SINE Alu -9 303 1 221 318 228 13 chr2 199627795 199628028 -51059826 - L2 LINE L2 -482 2832 2550 263 246 62 0 chr2 199628312 199628377 -51059477 - L2 LINE L2 -1083 2231 2163 393 284 31 49 chr2 199628381 199628543 -51059311 - MER5A DNA MER1_type 0 189 31 23 33 0 0 chr2 199629248 199629278 -51058576 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 199629902 199629925 -51057929 + AT_rich Low_complexity Low_complexity 1 23 0 1787 160 3 38 chr2 199629976 199630097 -51057757 + AluJo SINE Alu 3 127 -185 2532 61 3 0 chr2 199630097 199630394 -51057460 - AluSg SINE Alu -8 302 5 1787 160 3 38 chr2 199630394 199630590 -51057264 + AluJo SINE Alu 127 309 -3 2356 64 3 0 chr2 199630650 199630968 -51056886 - AluSp SINE Alu 0 319 1 21 0 0 0 chr2 199630978 199630999 -51056855 + AT_rich Low_complexity Low_complexity 1 21 0 1272 138 9 31 chr2 199631294 199631519 -51056335 - L1MB4 LINE L1 -129 6051 5832 23 0 0 0 chr2 199631563 199631586 -51056268 + AT_rich Low_complexity Low_complexity 1 23 0 1827 144 7 21 chr2 199631717 199632002 -51055852 - AluJb SINE Alu -27 285 5 23 0 0 0 chr2 199632010 199632033 -51055821 + AT_rich Low_complexity Low_complexity 1 23 0 1147 201 59 0 chr2 199632151 199632370 -51055484 - MLT1D LTR MaLR 0 505 274 1932 127 40 22 chr2 199632396 199632720 -51055134 + MER1B DNA MER1_type 10 339 0 675 226 82 89 chr2 199632720 199633012 -51054842 - MLT1D LTR MaLR -214 291 2 215 325 61 18 chr2 199633238 199633352 -51054502 + L2 LINE L2 2928 3046 -226 252 0 0 0 chr2 199633454 199633482 -51054372 + (CCA)n Simple_repeat Simple_repeat 3 30 0 1220 213 11 24 chr2 199633770 199634057 -51053797 - AluJo SINE Alu -29 283 1 1937 154 0 13 chr2 199634157 199634462 -51053392 + AluJb SINE Alu 1 301 -11 596 211 261 6 chr2 199634470 199634650 -51053204 + MIR SINE MIR 6 231 -31 1419 102 0 0 chr2 199635877 199636073 -51051781 + AluY SINE Alu 116 311 0 734 145 0 26 chr2 199636723 199636840 -51051014 + AluJb SINE Alu 177 290 -22 1771 185 121 11 chr2 199637949 199638397 -51049457 - LTR54B LTR ERV1 -1 497 1 2137 127 0 0 chr2 199640187 199640478 -51047376 - AluSx SINE Alu -21 291 1 1993 127 17 35 chr2 199640586 199640932 -51046922 - MER4E LTR ERV1 -5 774 435 1630 109 5 0 chr2 199641044 199641265 -51046589 + AluSp SINE Alu 82 303 -10 449 186 2 0 chr2 199641912 199642070 -51045784 + MER58B DNA MER1_type 197 318 -23 206 244 0 0 chr2 199642430 199642475 -51045379 + L2 LINE L2 2297 2341 -973 281 247 94 0 chr2 199642522 199642607 -51045247 + L2 LINE L2 2665 2757 -557 237 238 12 116 chr2 199642777 199642949 -51044905 - L1ME LINE L1 -359 5762 5609 482 296 155 33 chr2 199643257 199643619 -51044235 - L2 LINE L2 -70 3243 2838 310 254 105 0 chr2 199643887 199644001 -51043853 + L1ME3A LINE L1 6040 6165 -5 394 314 61 46 chr2 199644074 199644460 -51043394 + L1MC/D LINE L1 4418 4828 -1318 448 263 52 17 chr2 199644492 199644724 -51043130 + L1MC/D LINE L1 4962 5201 -945 946 130 0 52 chr2 199644731 199644885 -51042969 + AluSg/x SINE Alu 135 280 -30 338 289 78 44 chr2 199645130 199645310 -51042544 + L1MC/D LINE L1 5466 5651 -513 2151 93 14 3 chr2 199645353 199645643 -51042211 + AluY SINE Alu 1 293 -18 282 189 111 11 chr2 199645682 199645772 -51042082 - MLT1L LTR MaLR -21 594 496 22 35 0 0 chr2 199645861 199645890 -51041964 + AT_rich Low_complexity Low_complexity 1 29 0 2248 134 63 10 chr2 199646036 199646430 -51041424 + Tigger3(Golem) DNA MER2_type 2615 3029 0 2264 105 7 0 chr2 199646508 199646813 -51041041 + AluSq SINE Alu 1 307 -6 251 277 85 21 chr2 199646846 199646987 -51040867 + L1MC/D LINE L1 5734 5883 -1925 561 243 81 29 chr2 199647314 199647487 -51040367 + MER5A DNA MER1_type 1 182 -7 1376 157 101 19 chr2 199647626 199647894 -51039960 + AluJb SINE Alu 1 290 -22 1623 168 10 30 chr2 199648651 199648954 -51038900 + AluJo SINE Alu 1 297 -15 370 258 66 53 chr2 199649197 199649348 -51038506 - MLT1J2 LTR MaLR -223 227 75 5588 189 6 17 chr2 199649795 199650095 -51037759 - L1P4 LINE L1 -542 5624 5322 2111 125 3 0 chr2 199650095 199650390 -51037464 - AluSc SINE Alu -13 296 1 5588 189 6 17 chr2 199650390 199651600 -51036254 - L1P4 LINE L1 -844 5322 4122 1927 134 106 0 chr2 199652182 199652511 -51035343 + L1PA16 LINE L1 5803 6166 0 212 109 0 22 chr2 199652908 199652954 -51034900 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 23 0 0 0 chr2 199654543 199654566 -51033288 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 199655306 199655327 -51032527 + AT_rich Low_complexity Low_complexity 1 21 0 2172 89 21 7 chr2 199655852 199656143 -51031711 - AluSx SINE Alu -17 295 1 2175 111 3 10 chr2 199657296 199657594 -51030260 + AluSx SINE Alu 2 297 -15 434 240 0 10 chr2 199657895 199657995 -51029859 + MIR SINE MIR 53 151 -111 6128 138 19 5 chr2 199658707 199659064 -51028790 - L1PB1 LINE L1 0 6151 5801 378 0 0 0 chr2 199659064 199659106 -51028748 + (TG)n Simple_repeat Simple_repeat 2 43 0 6128 138 19 5 chr2 199659106 199660365 -51027489 - L1PB1 LINE L1 -350 5801 4516 478 287 87 26 chr2 199660429 199660659 -51027195 + L2 LINE L2 2175 2418 -896 4875 164 74 31 chr2 199660794 199660814 -51027040 - L1MC2 LINE L1 -2 6342 6324 2048 150 0 0 chr2 199660814 199661107 -51026747 + AluSx SINE Alu 1 293 -19 4875 164 74 31 chr2 199661107 199661206 -51026648 - L1MC2 LINE L1 -20 6324 6231 2005 109 39 3 chr2 199661206 199661490 -51026364 - AluSc SINE Alu -15 294 1 4875 164 74 31 chr2 199661490 199662492 -51025362 - L1MC2 LINE L1 -113 6231 5173 1391 165 4 55 chr2 199662492 199662747 -51025107 + AluJo SINE Alu 3 244 -68 3066 143 40 12 chr2 199662750 199663269 -51024585 - MER50 LTR ERV1 -23 711 178 434 156 0 0 chr2 199663270 199663334 -51024520 - AluSx SINE Alu -15 295 232 2463 65 0 10 chr2 199663334 199663640 -51024214 - AluY SINE Alu -8 303 1 1675 152 0 0 chr2 199663640 199663882 -51023972 - AluSx SINE Alu -69 243 1 1012 130 10 68 chr2 199663882 199664074 -51023780 - MER50 LTR ERV1 -553 181 1 355 140 0 0 chr2 199664074 199664131 -51023723 + Alu SINE Alu 243 299 -3 1006 206 125 7 chr2 199664143 199664424 -51023430 - L1MC2 LINE L1 -978 5168 4855 277 286 159 40 chr2 199665175 199665427 -51022427 + L2 LINE L2 3024 3305 -8 2013 141 7 0 chr2 199665496 199665802 -51022052 + AluSx SINE Alu 1 308 0 2315 73 0 3 chr2 199666449 199666736 -51021118 + AluSg SINE Alu 6 291 -19 377 300 107 37 chr2 199668531 199669022 -51018832 - L1MEd LINE L1 -4462 1667 1031 332 303 127 32 chr2 199669028 199669249 -51018605 - L1MEd LINE L1 -5059 1060 819 27 29 0 0 chr2 199670854 199670888 -51016966 + AT_rich Low_complexity Low_complexity 1 34 0 230 200 133 0 chr2 199670888 199670963 -51016891 - L1MA4 LINE L1 -12 6288 6204 1317 140 9 22 chr2 199671200 199671422 -51016432 - L1PA15 LINE L1 -2 6163 5945 22 0 0 0 chr2 199671638 199671660 -51016194 + AT_rich Low_complexity Low_complexity 1 22 0 1919 153 51 0 chr2 199671729 199672083 -51015771 + L1PB4 LINE L1 5706 6077 -79 373 219 24 32 chr2 199672121 199672244 -51015610 + L1MA4A LINE L1 6182 6303 0 221 260 31 73 chr2 199672676 199672772 -51015082 + MIR SINE MIR 57 148 -114 840 129 23 23 chr2 199673865 199673997 -51013857 + FLAM_C SINE Alu 2 133 0 228 86 0 0 chr2 199674027 199674062 -51013792 + (TG)n Simple_repeat Simple_repeat 1 35 0 21 0 0 0 chr2 199674202 199674223 -51013631 + AT_rich Low_complexity Low_complexity 1 21 0 239 98 0 24 chr2 199674361 199674402 -51013452 - L1ME LINE L1 -235 5886 5847 304 333 35 7 chr2 199674432 199674576 -51013278 - L1ME LINE L1 -345 5776 5629 27 0 0 0 chr2 199679065 199679092 -51008762 + AT_rich Low_complexity Low_complexity 1 27 0 1006 161 19 14 chr2 199679153 199679364 -51008490 - L1MA9 LINE L1 -10 6302 6091 2469 135 19 5 chr2 199679508 199679924 -51007930 - L1MA5 LINE L1 -2 6298 5877 226 336 124 9 chr2 199683055 199683168 -51004686 + L2 LINE L2 3187 3312 -1 374 149 104 0 chr2 199683468 199683535 -51004319 - L1 LINE L1 -1178 4968 4895 376 152 0 45 chr2 199683859 199683925 -51003929 - L1M3f LINE L1 -5263 65 3 499 199 143 10 chr2 199683939 199684135 -51003719 + L1ME1 LINE L1 4985 5206 -940 2032 259 67 31 chr2 199684141 199684840 -51003014 + L1ME1 LINE L1 5351 6074 -92 868 141 20 0 chr2 199684873 199685022 -51002832 + AluJb SINE Alu 155 306 -6 26 30 0 0 chr2 199685172 199685205 -51002649 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr2 199685687 199685717 -51002137 + AT_rich Low_complexity Low_complexity 1 30 0 523 287 137 56 chr2 199685954 199686522 -51001332 - L1MEc LINE L1 -3587 2628 2069 23 33 0 0 chr2 199686537 199686567 -51001287 + AT_rich Low_complexity Low_complexity 1 30 0 2150 78 4 0 chr2 199686925 199687196 -51000658 + AluY SINE Alu 1 272 -39 1795 131 26 36 chr2 199687209 199687514 -51000340 + AluJb SINE Alu 2 303 -9 22 0 0 0 chr2 199687621 199687643 -51000211 + AT_rich Low_complexity Low_complexity 1 22 0 1596 150 20 14 chr2 199687650 199687943 -50999911 + L1MC2 LINE L1 6009 6303 -41 876 235 43 45 chr2 199688036 199688143 -50999711 - L1M4 LINE L1 -1577 4569 4463 659 248 44 15 chr2 199688143 199688349 -50999505 + MER58C DNA MER1_type 1 212 -3 876 235 43 45 chr2 199688349 199688615 -50999239 - L1M4 LINE L1 -1683 4463 4197 278 285 22 0 chr2 199690012 199690095 -50997759 - MIR SINE MIR -83 125 40 1754 152 23 19 chr2 199690841 199691150 -50996704 + AluJb SINE Alu 1 310 -2 332 153 0 14 chr2 199691152 199691224 -50996630 + GA-rich Low_complexity Low_complexity 3 73 0 24 32 0 0 chr2 199691382 199691413 -50996441 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 199691681 199691709 -50996145 + AT_rich Low_complexity Low_complexity 1 28 0 206 258 76 0 chr2 199693605 199693671 -50994183 - MIR SINE MIR -7 255 185 328 291 61 20 chr2 199695985 199696133 -50991721 + MIR SINE MIR 1 154 -108 291 304 59 0 chr2 199696195 199696297 -50991557 - MER103 DNA DNA -48 118 11 404 319 37 5 chr2 199696540 199696728 -50991126 - L1ME LINE L1 -368 5753 5560 249 324 34 40 chr2 199696817 199696965 -50990889 - MIR SINE MIR -49 213 67 2334 60 0 3 chr2 199697010 199697292 -50990562 - AluY SINE Alu -30 281 1 562 115 23 0 chr2 199697891 199697978 -50989876 + L1MB2 LINE L1 6055 6143 -28 239 281 0 0 chr2 199699074 199699131 -50988723 - MLT1J2 LTR MaLR -2 448 392 278 267 99 53 chr2 199699657 199699820 -50988034 - L1ME4a LINE L1 -224 5897 5716 2328 56 16 47 chr2 199699820 199700141 -50987713 + AluY SINE Alu 1 311 0 278 267 99 53 chr2 199700141 199700239 -50987615 - L1ME4a LINE L1 -405 5716 5624 238 253 11 32 chr2 199701747 199701842 -50986012 - HAL1b LINE L1 -611 737 645 1821 147 25 0 chr2 199701843 199702129 -50985725 - AluJo SINE Alu -15 297 5 193 264 0 0 chr2 199702161 199702214 -50985640 - L2 LINE L2 0 3313 3261 21 0 0 0 chr2 199702218 199702239 -50985615 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 199702637 199702659 -50985195 + AT_rich Low_complexity Low_complexity 1 22 0 1165 169 4 44 chr2 199705618 199705843 -50982011 - AluJo SINE Alu -11 301 86 22 0 0 0 chr2 199705843 199705865 -50981989 + AT_rich Low_complexity Low_complexity 1 22 0 234 277 0 0 chr2 199707506 199707571 -50980283 + T-rich Low_complexity Low_complexity 1 65 0 26 88 0 0 chr2 199707836 199707904 -50979950 + AT_rich Low_complexity Low_complexity 1 68 0 26 30 0 0 chr2 199707965 199707998 -50979856 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr2 199708347 199708368 -50979486 + AT_rich Low_complexity Low_complexity 1 21 0 780 183 0 0 chr2 199708725 199708856 -50978998 + FRAM SINE Alu 10 140 -36 2058 159 22 6 chr2 199709284 199709643 -50978211 - MLT1A1 LTR MaLR 0 365 1 775 306 156 3 chr2 199709703 199710050 -50977804 + L2 LINE L2 2914 3313 0 548 296 84 62 chr2 199710305 199710819 -50977035 + L2 LINE L2 2701 3276 -37 2094 117 62 3 chr2 199710853 199711177 -50976677 + MER61A LTR ERV1 1 343 0 4013 171 65 20 chr2 199711452 199711795 -50976059 + L1MB7 LINE L1 5128 5454 -730 2434 48 41 3 chr2 199711795 199712089 -50975765 + AluY SINE Alu 1 305 -6 4013 171 65 20 chr2 199712089 199712740 -50975114 + L1MB7 LINE L1 5454 6165 -19 442 161 0 23 chr2 199712800 199712887 -50974967 + Charlie2 DNA MER1_type 2719 2803 -59 577 174 12 75 chr2 199712890 199713051 -50974803 + L1ME3 LINE L1 5970 6120 -42 2256 105 76 15 chr2 199713060 199713402 -50974452 - THE1B LTR MaLR 0 364 2 373 315 39 16 chr2 199713449 199713576 -50974278 - MER5A DNA MER1_type -59 130 1 262 302 27 60 chr2 199713941 199714090 -50973764 - MIR SINE MIR -46 216 73 881 178 85 29 chr2 199714135 199714489 -50973365 - MLT1B LTR MaLR 0 390 1 195 42 0 0 chr2 199714702 199714726 -50973128 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 183 232 53 95 chr2 199714803 199714898 -50972956 + MIR SINE MIR 48 138 -70 693 251 184 58 chr2 199716270 199716705 -50971149 - LTR33 LTR ERVL -8 513 24 216 257 81 14 chr2 199716864 199716938 -50970916 + MIR SINE MIR 63 141 -121 330 315 67 34 chr2 199716945 199717123 -50970731 - L2 LINE L2 -5 3308 3125 2139 99 0 0 chr2 199717131 199717404 -50970450 - AluSq SINE Alu -19 294 22 473 338 165 6 chr2 199717543 199717871 -50969983 - L2 LINE L2 -421 2893 2514 216 188 0 87 chr2 199717858 199717927 -50969927 + MIR SINE MIR 151 213 -49 * 190 280 0 0 chr2 199718648 199718698 -50969156 + L2 LINE L2 3259 3308 -5 27 29 0 0 chr2 199719114 199719148 -50968706 + AT_rich Low_complexity Low_complexity 1 34 0 302 190 63 126 chr2 199722016 199722190 -50965664 + MER104 DNA Tc2 11 173 -7 1552 196 67 39 chr2 199722978 199723464 -50964390 - Charlie1 DNA MER1_type 0 2761 1 637 234 24 49 chr2 199724470 199724675 -50963179 + MER58C DNA MER1_type 1 200 -15 279 281 208 0 chr2 199724724 199724820 -50963034 - MIR3 SINE MIR -43 165 50 817 250 51 25 chr2 199724955 199725191 -50962663 - MIR SINE MIR -1 261 20 24 53 0 0 chr2 199725393 199725431 -50962423 + AT_rich Low_complexity Low_complexity 1 38 0 228 103 103 0 chr2 199727091 199727130 -50960724 + MER57A LTR ERV1 295 337 -66 23 0 0 0 chr2 199727130 199727153 -50960701 + AT_rich Low_complexity Low_complexity 1 23 0 309 26 0 0 chr2 199727225 199727263 -50960591 + (TC)n Simple_repeat Simple_repeat 2 39 0 225 0 0 0 chr2 199727262 199727287 -50960567 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 2369 90 0 0 chr2 199727891 199728202 -50959652 - AluY SINE Alu 0 311 1 532 276 139 30 chr2 199729087 199729460 -50958394 + LTR16C LTR ERVL 76 489 -2 1708 158 6 25 chr2 199730277 199730593 -50957261 + AluJo SINE Alu 2 311 -1 454 209 33 72 chr2 199730728 199730881 -50956973 + MLT1E2 LTR MaLR 1 147 -479 869 203 42 9 chr2 199730891 199731108 -50956746 + L1MC4 LINE L1 6866 7089 -953 426 184 10 58 chr2 199731113 199731216 -50956638 + L1MC4a LINE L1 7163 7260 -548 1475 244 68 10 chr2 199731236 199731650 -50956204 + MER74C LTR ERVL 10 447 -13 701 177 85 105 chr2 199731679 199731927 -50955927 + L1MC4 LINE L1 7337 7579 -463 2860 115 86 0 chr2 199732522 199732964 -50954890 - L1PA15 LINE L1 -3 6162 5683 285 119 0 0 chr2 199732965 199733007 -50954847 - MLT2A2 LTR ERVL -10 443 402 214 85 21 21 chr2 199733012 199733059 -50954795 + (TA)n Simple_repeat Simple_repeat 1 47 0 215 30 0 30 chr2 199733086 199733119 -50954735 + (TA)n Simple_repeat Simple_repeat 2 33 0 3119 93 35 2 chr2 199733164 199733196 -50954658 - MLT2A2 LTR ERVL -10 443 414 297 0 0 0 chr2 199733196 199733229 -50954625 + (CA)n Simple_repeat Simple_repeat 2 34 0 3119 93 35 2 chr2 199733229 199733625 -50954229 - MLT2A2 LTR ERVL -39 414 1 4187 158 12 1 chr2 199733625 199734723 -50953131 - L1PA15 LINE L1 -473 5692 4582 24 0 0 0 chr2 199735394 199735418 -50952436 + AT_rich Low_complexity Low_complexity 1 24 0 2399 81 0 0 chr2 199736067 199736364 -50951490 - AluY SINE Alu -14 297 1 26 0 0 0 chr2 199736731 199736757 -50951097 + AT_rich Low_complexity Low_complexity 1 26 0 193 319 58 0 chr2 199737748 199737817 -50950037 - MIR SINE MIR -1 261 189 308 64 21 0 chr2 199738919 199738966 -50948888 + (GA)n Simple_repeat Simple_repeat 1 48 0 5440 273 37 10 chr2 199738968 199741548 -50946306 - L1 LINE L1 -1213 5169 2413 1076 277 102 25 chr2 199741541 199742089 -50945765 - L1ME LINE L1 -5073 1457 868 * 322 346 28 55 chr2 199742656 199742873 -50944981 - L1ME LINE L1 -5920 610 1 182 361 39 23 chr2 199743200 199743330 -50944524 - L2 LINE L2 -223 3049 2918 25 0 0 0 chr2 199743452 199743477 -50944377 + AT_rich Low_complexity Low_complexity 1 25 0 1563 167 44 70 chr2 199743581 199743664 -50944190 + MLT1B LTR MaLR 1 85 -305 1644 168 73 0 chr2 199743664 199743938 -50943916 - AluJb SINE Alu -12 300 7 1563 167 44 70 chr2 199743938 199744238 -50943616 + MLT1B LTR MaLR 85 374 -16 2308 107 0 0 chr2 199744306 199744615 -50943239 - AluSc SINE Alu 0 309 1 198 118 0 0 chr2 199744763 199744797 -50943057 + (T)n Simple_repeat Simple_repeat 1 34 0 379 346 6 43 chr2 199745358 199745520 -50942334 - MIR3 SINE MIR -51 157 2 1134 152 0 0 chr2 199746051 199746216 -50941638 - AluJo SINE Alu -109 203 39 1483 107 5 0 chr2 199746223 199746428 -50941426 + AluSg/x SINE Alu 98 303 -7 190 277 264 27 chr2 199747129 199747277 -50940577 + MIR SINE MIR 42 224 -38 2065 164 3 0 chr2 199747437 199747748 -50940106 + AluJb SINE Alu 1 312 0 244 252 16 118 chr2 199747914 199747963 -50939891 - MIR3 SINE MIR -6 202 150 776 239 49 16 chr2 199747963 199748210 -50939644 - MER112 DNA MER1_type -1 255 1 244 252 16 118 chr2 199748210 199748287 -50939567 - MIR3 SINE MIR -58 150 89 186 313 30 15 chr2 199748388 199748455 -50939399 - MIR SINE MIR -125 83 16 550 297 38 38 chr2 199749226 199749411 -50938443 - L2 LINE L2 0 3272 3088 28 0 0 0 chr2 199750214 199750242 -50937612 + AT_rich Low_complexity Low_complexity 1 28 0 33 0 0 0 chr2 199751552 199751585 -50936269 + AT_rich Low_complexity Low_complexity 1 33 0 2221 84 3 3 chr2 199751589 199751875 -50935979 - AluY SINE Alu -25 286 1 521 227 152 47 chr2 199751902 199752224 -50935630 + L1MC5 LINE L1 7539 7894 -67 1611 191 17 0 chr2 199752301 199752594 -50935260 + AluJo SINE Alu 1 298 -14 1721 169 0 20 chr2 199752596 199752891 -50934963 + AluJb SINE Alu 1 289 -23 1049 279 82 62 chr2 199752983 199753484 -50934370 + MLT1J LTR MaLR 1 511 0 389 240 27 68 chr2 199753646 199753792 -50934062 + MIR SINE MIR 1 140 -122 703 260 92 16 chr2 199753932 199754182 -50933672 + L1ME LINE L1 5555 5823 -298 533 293 99 19 chr2 199754504 199754818 -50933036 + L1ME4a LINE L1 5588 5926 -195 1653 160 72 7 chr2 199754890 199755183 -50932671 - AluJb SINE Alu 0 312 1 22 56 0 0 chr2 199755668 199755704 -50932150 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr2 199756979 199757014 -50930840 + AT_rich Low_complexity Low_complexity 1 35 0 749 263 38 0 chr2 199757090 199757276 -50930578 + MIR SINE MIR 68 260 -2 2206 146 118 2 chr2 199758400 199758805 -50929049 + LTR47A LTR ERVL 1 452 0 478 300 135 0 chr2 199759070 199759240 -50928614 + MER91A DNA MER1_type 4 196 0 2320 62 0 0 chr2 199759702 199759993 -50927861 - L1PA8 LINE L1 0 6172 5882 820 241 6 0 chr2 199760195 199760365 -50927489 + MER5B DNA MER1_type 1 171 -7 384 326 36 69 chr2 199760365 199760641 -50927213 + L2 LINE L2 2950 3216 -56 242 319 108 47 chr2 199760991 199761204 -50926650 - L2 LINE L2 -222 3050 2825 21 0 0 0 chr2 199761233 199761254 -50926600 + AT_rich Low_complexity Low_complexity 1 21 0 242 303 58 77 chr2 199761518 199761726 -50926128 - L2 LINE L2 -1495 1819 1616 2111 74 37 0 chr2 199764162 199764457 -50923397 - AluY SINE Alu 0 305 1 212 403 8 24 chr2 199765067 199765138 -50922716 + L2 LINE L2 3132 3202 -70 1847 171 0 7 chr2 199765138 199765437 -50922417 + AluJb SINE Alu 3 299 -13 212 403 8 24 chr2 199765437 199765489 -50922365 + L2 LINE L2 3202 3253 -19 1426 214 39 15 chr2 199765959 199766296 -50921558 - L1ME3A LINE L1 0 6170 5826 1988 204 31 7 chr2 199766330 199766957 -50920897 - MER67C LTR ERV1 0 710 5 932 240 18 4 chr2 199766962 199767191 -50920663 - L1ME3A LINE L1 -385 5785 5554 2138 163 50 48 chr2 199767786 199768241 -50919613 - LTR8A LTR ERV1 0 727 272 674 169 44 37 chr2 199768238 199768374 -50919480 - LTR8 LTR ERV1 -552 139 3 * 510 188 86 65 chr2 199768395 199768527 -50919327 - L1ME4a LINE L1 -237 5884 5745 1778 175 20 0 chr2 199768527 199768824 -50919030 + AluJo SINE Alu 1 303 -9 510 188 86 65 chr2 199768824 199768877 -50918977 - L1ME4a LINE L1 -376 5745 5695 1163 134 0 21 chr2 199769595 199769781 -50918073 + AluJb SINE Alu 130 311 -1 27 49 0 0 chr2 199770637 199770678 -50917176 + AT_rich Low_complexity Low_complexity 1 41 0 24 0 0 0 chr2 199772368 199772392 -50915462 + AT_rich Low_complexity Low_complexity 1 24 0 2292 115 0 3 chr2 199772720 199773025 -50914829 + AluSx SINE Alu 1 304 -8 22 0 0 0 chr2 199773182 199773204 -50914650 + AT_rich Low_complexity Low_complexity 1 22 0 22 80 0 0 chr2 199773638 199773688 -50914166 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr2 199773914 199773935 -50913919 + AT_rich Low_complexity Low_complexity 1 21 0 904 190 208 0 chr2 199774381 199774607 -50913247 - ORSL DNA AcHobo 0 275 3 513 279 86 55 chr2 199775382 199775708 -50912146 + MLT1I LTR MaLR 74 409 0 1273 210 11 4 chr2 199777184 199777465 -50910389 + L1PB4 LINE L1 5867 6149 -7 983 166 22 11 chr2 199777481 199777662 -50910192 - AluSg/x SINE Alu 0 310 128 2069 115 39 0 chr2 199777670 199777949 -50909905 - AluSq SINE Alu -23 290 1 892 199 93 53 chr2 199778948 199779174 -50908680 - MSTB2 LTR MaLR -1 456 222 774 160 3 24 chr2 199779902 199780061 -50907793 + MSTB2 LTR MaLR 1 146 -286 22 35 0 0 chr2 199780503 199780532 -50907322 + AT_rich Low_complexity Low_complexity 1 29 0 2483 62 0 10 chr2 199781332 199781640 -50906214 + AluY SINE Alu 1 305 -6 395 315 111 19 chr2 199781833 199781995 -50905859 - MIR SINE MIR -7 255 79 643 249 81 39 chr2 199782279 199782564 -50905290 - L2 LINE L2 -457 2857 2561 456 207 33 50 chr2 199784349 199784470 -50903384 + L2 LINE L2 3180 3298 -15 268 394 49 37 chr2 199784468 199784714 -50903140 + L2 LINE L2 2725 2973 -341 * 2134 104 0 3 chr2 199784792 199785079 -50902775 - AluSx SINE Alu -26 286 1 22 0 0 0 chr2 199786007 199786029 -50901825 + AT_rich Low_complexity Low_complexity 1 22 0 509 269 47 123 chr2 199786881 199786941 -50900913 - L1MC4 LINE L1 0 8042 7979 1761 159 3 36 chr2 199786941 199787249 -50900605 + AluJo SINE Alu 1 298 -14 509 269 47 123 chr2 199787249 199787716 -50900138 - L1MC4 LINE L1 -63 7979 7555 387 0 0 0 chr2 199787740 199787783 -50900071 + (TG)n Simple_repeat Simple_repeat 2 44 0 5761 158 9 26 chr2 199787792 199787989 -50899865 - L1PA16 LINE L1 0 6166 5967 2006 145 3 3 chr2 199787989 199788293 -50899561 - AluJb SINE Alu -8 304 1 5761 158 9 26 chr2 199788293 199788798 -50899056 - L1PA16 LINE L1 -199 5967 5455 1581 67 0 0 chr2 199788798 199788992 -50898862 - AluY SINE Alu -117 194 1 5761 158 9 26 chr2 199788992 199790368 -50897486 - L1PA16 LINE L1 -711 5455 4125 2901 237 31 81 chr2 199790372 199791574 -50896280 - L1MC4 LINE L1 -500 7542 6401 966 234 66 24 chr2 199793895 199794374 -50893480 - MER114 LTR ERV -2 646 96 21 0 0 0 chr2 199794391 199794412 -50893442 + AT_rich Low_complexity Low_complexity 1 21 0 1148 206 43 78 chr2 199794433 199794778 -50893076 + L1MC1 LINE L1 3812 4144 -2002 30 0 0 0 chr2 199794802 199794832 -50893022 + AT_rich Low_complexity Low_complexity 1 30 0 5872 163 28 16 chr2 199794847 199794967 -50892887 + L1MC1 LINE L1 5209 5326 -1007 2530 50 0 3 chr2 199794967 199795265 -50892589 + AluY SINE Alu 1 297 -14 5872 163 28 16 chr2 199795265 199796255 -50891599 + L1MC1 LINE L1 5326 6333 0 1491 222 71 24 chr2 199796457 199796867 -50890987 + MLT1C LTR MaLR 4 432 -35 272 306 193 23 chr2 199797141 199797494 -50890360 - L2 LINE L2 -992 2322 1910 25 51 0 0 chr2 199797644 199797683 -50890171 + AT_rich Low_complexity Low_complexity 1 39 0 399 21 0 0 chr2 199798152 199798200 -50889654 + (TG)n Simple_repeat Simple_repeat 2 49 0 27 62 0 0 chr2 199799374 199799422 -50888432 + AT_rich Low_complexity Low_complexity 1 48 0 2238 94 0 7 chr2 199799422 199799710 -50888144 - AluSx SINE Alu -26 286 1 329 271 126 20 chr2 199799755 199799954 -50887900 + L1M4 LINE L1 5184 5403 -743 27 49 0 0 chr2 199799959 199800000 -50887854 + AT_rich Low_complexity Low_complexity 1 41 0 357 249 140 42 chr2 199800239 199800272 -50887582 + L1MC4 LINE L1 5266 5294 -2514 1880 158 14 0 chr2 199800272 199800569 -50887285 + AluJb SINE Alu 1 301 -11 357 249 140 42 chr2 199800569 199800728 -50887126 + L1MC4 LINE L1 5294 5477 -2331 2299 87 0 3 chr2 199801034 199801332 -50886522 + AluY SINE Alu 1 297 -14 386 303 8 8 chr2 199801400 199801519 -50886335 + L1MC4 LINE L1 6585 6703 -1339 1618 152 76 10 chr2 199801532 199801821 -50886033 - AluJb SINE Alu -4 308 1 188 208 0 57 chr2 199801902 199801955 -50885899 + L2 LINE L2 3264 3313 0 362 271 47 9 chr2 199802788 199802895 -50884959 - MIR SINE MIR -103 159 49 22 0 0 0 chr2 199803388 199803410 -50884444 + AT_rich Low_complexity Low_complexity 1 22 0 2317 103 10 0 chr2 199803703 199804013 -50883841 - AluSp SINE Alu 0 313 1 856 208 39 81 chr2 199805374 199805634 -50882220 - MIR SINE MIR -11 251 3 21 0 0 0 chr2 199806558 199806579 -50881275 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 199806689 199806711 -50881143 + AT_rich Low_complexity Low_complexity 1 22 0 2236 107 0 0 chr2 199807094 199807393 -50880461 + AluSx SINE Alu 1 299 -13 30 45 0 0 chr2 199807412 199807456 -50880398 + AT_rich Low_complexity Low_complexity 1 44 0 452 253 86 40 chr2 199808562 199808736 -50879118 - L2 LINE L2 0 3313 3132 1274 294 101 44 chr2 199808754 199808806 -50879048 - L2 LINE L2 -60 3253 3205 1345 211 61 3 chr2 199808806 199808981 -50878873 - AluJo SINE Alu -1 311 111 263 27 0 27 chr2 199808981 199809018 -50878836 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 1345 211 61 3 chr2 199809018 199809136 -50878718 - AluJo SINE Alu -201 111 1 1274 294 101 44 chr2 199809136 199809179 -50878675 - L2 LINE L2 -108 3205 3166 1209 176 118 15 chr2 199809179 199809451 -50878403 + AluJo SINE Alu 1 300 -12 1274 294 101 44 chr2 199809451 199810339 -50877515 - L2 LINE L2 -147 3166 2205 1660 164 114 74 chr2 199810390 199810811 -50877043 - LTR47A LTR ERVL -2 450 13 667 187 24 0 chr2 199810811 199810934 -50876920 + FLAM_C SINE Alu 1 126 -7 263 316 195 8 chr2 199811464 199811818 -50876036 + L1ME3A LINE L1 5464 5883 -1925 224 143 48 0 chr2 199811941 199812025 -50875829 + (TA)n Simple_repeat Simple_repeat 1 88 0 1131 259 22 16 chr2 199812029 199812399 -50875455 - L1MC4 LINE L1 -145 7897 7526 24 0 0 0 chr2 199812531 199812555 -50875299 + AT_rich Low_complexity Low_complexity 1 24 0 929 260 26 13 chr2 199812694 199813079 -50874775 + L1M4 LINE L1 2593 2982 -3164 462 274 158 4 chr2 199813089 199813323 -50874531 + L1M4 LINE L1 3109 3378 -2768 14989 144 25 29 chr2 199813333 199813712 -50874142 - L1MA3 LINE L1 0 7724 7345 2109 109 20 0 chr2 199813712 199814006 -50873848 + AluSx SINE Alu 7 306 -6 14989 144 25 29 chr2 199814006 199820121 -50867733 - L1MA3 LINE L1 -379 7345 1248 722 160 0 8 chr2 199820199 199820318 -50867536 + AluJo/FLAM SINE Alu 4 121 -191 1460 135 19 5 chr2 199820318 199820533 -50867321 - AluJb SINE Alu -22 290 73 7293 146 19 5 chr2 199820534 199821700 -50866154 - L1MA3 LINE L1 -6370 1195 14 1891 298 111 9 chr2 199821862 199822655 -50865199 - HAL1 LINE L1 -1623 884 11 1644 170 3 69 chr2 199823049 199823168 -50864686 + AluJo SINE Alu 4 129 -183 2005 139 7 0 chr2 199823168 199823462 -50864392 - AluJb SINE Alu -16 296 1 1644 170 3 69 chr2 199823462 199823660 -50864194 + AluJo SINE Alu 129 300 -12 626 266 16 10 chr2 199824286 199824478 -50863376 + L1ME3A LINE L1 5975 6167 -3 744 189 94 0 chr2 199824595 199824775 -50863079 - L1MD3 LINE L1 -16 7979 7783 605 202 0 0 chr2 199824919 199825023 -50862831 + U6 snRNA snRNA 1 104 -3 646 121 100 0 chr2 199825024 199825164 -50862690 + L1MA8 LINE L1 6138 6291 0 2203 114 0 0 chr2 199825222 199825519 -50862335 - AluSc SINE Alu -12 297 1 823 149 0 8 chr2 199825548 199825682 -50862172 - FLAM_C SINE Alu 0 133 1 29 0 0 0 chr2 199825744 199825773 -50862081 + AT_rich Low_complexity Low_complexity 1 29 0 1981 87 42 0 chr2 199826306 199826570 -50861284 - AluSq SINE Alu -11 302 28 223 154 39 0 chr2 199826661 199826713 -50861141 + A-rich Low_complexity Low_complexity 2 55 0 364 295 52 45 chr2 199827273 199827475 -50860379 + MIR SINE MIR 4 203 -59 211 157 78 20 chr2 199827656 199827707 -50860147 + MIR SINE MIR 114 167 -95 1552 169 11 11 chr2 199828636 199828902 -50858952 + AluJb SINE Alu 1 266 -46 645 223 137 64 chr2 199829346 199829800 -50858054 + HAL1 LINE L1 2021 2507 0 1471 137 50 77 chr2 199829918 199830076 -50857778 - AluJo SINE Alu -20 292 144 2032 92 36 7 chr2 199830076 199830357 -50857497 - AluSx SINE Alu -23 289 1 1471 137 50 77 chr2 199830357 199830498 -50857356 - AluJo SINE Alu -168 144 1 296 278 35 49 chr2 199830552 199830696 -50857158 - L1ME LINE L1 -451 5670 5529 28 0 0 0 chr2 199830717 199830745 -50857109 + AT_rich Low_complexity Low_complexity 1 28 0 1154 111 0 6 chr2 199831435 199831606 -50856248 + L1PA16 LINE L1 5997 6166 0 231 162 12 10 chr2 199833626 199833874 -50853980 + AluJo SINE Alu 6 299 -3 348 198 60 35 chr2 199834296 199834412 -50853442 + L1MC4 LINE L1 7919 8037 -5 221 269 77 48 chr2 199834897 199835001 -50852853 - L2 LINE L2 -47 3266 3160 1603 302 200 29 chr2 199835015 199836145 -50851709 + L2 LINE L2 1183 2119 -1194 1717 181 3 3 chr2 199836145 199836444 -50851410 - AluJb SINE Alu -13 299 1 1603 302 200 29 chr2 199836444 199837017 -50850837 + L2 LINE L2 2119 3289 -24 21 0 0 0 chr2 199837311 199837332 -50850522 + AT_rich Low_complexity Low_complexity 1 21 0 711 218 27 3 chr2 199837671 199837843 -50850011 - MIR SINE MIR -72 190 19 32 26 0 0 chr2 199838401 199838440 -50849414 + AT_rich Low_complexity Low_complexity 1 39 0 32983 33 8 1 chr2 199838440 199844547 -50843307 - L1PA3 LINE L1 -3 6152 12 1869 181 47 33 chr2 199845025 199845575 -50842279 - MLT2A2 LTR ERVL 0 554 1 873 148 48 63 chr2 199846463 199846652 -50841202 - MER3 DNA MER1_type -23 186 1 258 222 64 140 chr2 199846696 199846860 -50840994 - MIR SINE MIR -62 200 43 32 26 0 0 chr2 199847696 199847735 -50840119 + AT_rich Low_complexity Low_complexity 1 39 0 288 170 0 0 chr2 199847751 199847804 -50840050 + (TA)n Simple_repeat Simple_repeat 2 54 0 273 57 0 0 chr2 199847804 199847839 -50840015 + (CA)n Simple_repeat Simple_repeat 2 36 0 2623 204 72 13 chr2 199847839 199848134 -50839720 + MER82 DNA MER2_type 3 279 -374 2300 78 0 3 chr2 199848134 199848438 -50839416 + AluSp SINE Alu 1 303 0 2623 204 72 13 chr2 199848438 199848748 -50839106 + MER82 DNA MER2_type 279 645 -8 237 282 146 41 chr2 199849781 199850001 -50837853 - MARNA DNA Mariner -17 569 327 196 26 0 77 chr2 199851020 199851059 -50836795 + (ATTG)n Simple_repeat Simple_repeat 3 38 0 256 196 0 0 chr2 199852601 199852657 -50835197 + A-rich Low_complexity Low_complexity 1 56 0 22 56 0 0 chr2 199853007 199853043 -50834811 + AT_rich Low_complexity Low_complexity 1 36 0 2101 96 29 4 chr2 199853965 199854245 -50833609 + AluSg SINE Alu 1 287 -23 189 0 0 0 chr2 199854246 199854267 -50833587 + (T)n Simple_repeat Simple_repeat 1 21 0 294 157 78 113 chr2 199854756 199854811 -50833043 + L1MC/D LINE L1 5337 5392 -2416 2068 68 8 0 chr2 199854811 199855076 -50832778 + AluY SINE Alu 1 267 -44 294 157 78 113 chr2 199855076 199855107 -50832747 + L1MC/D LINE L1 5392 5423 -2385 2259 95 0 0 chr2 199855107 199855390 -50832464 + AluSc SINE Alu 1 283 -26 216 0 0 0 chr2 199855390 199855414 -50832440 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 294 157 78 113 chr2 199855414 199855440 -50832414 + L1MC/D LINE L1 5421 5447 -2361 1923 114 4 0 chr2 199855457 199855719 -50832135 + AluSx SINE Alu 1 263 -49 527 189 5 168 chr2 199856088 199856249 -50831605 + MER5B DNA MER1_type 2 131 -47 730 182 0 8 chr2 199856249 199856381 -50831473 + FLAM_C SINE Alu 1 131 -2 527 189 5 168 chr2 199856381 199856404 -50831450 + MER5B DNA MER1_type 131 156 -22 473 246 179 0 chr2 199856403 199856537 -50831317 + MER5A DNA MER1_type 26 183 -6 * 1542 189 23 23 chr2 199856634 199856940 -50830914 - AluJb SINE Alu -6 306 1 213 308 0 0 chr2 199857472 199857524 -50830330 - L2 LINE L2 -11 3302 3251 2190 86 10 14 chr2 199859150 199859440 -50828414 - AluSc SINE Alu -20 289 1 755 130 0 0 chr2 199860188 199860296 -50827558 + AluJo/FLAM SINE Alu 9 116 -196 2078 124 3 3 chr2 199860296 199860595 -50827259 - AluSx SINE Alu -13 299 1 212 179 0 0 chr2 199860612 199860651 -50827203 + A-rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 199861195 199861218 -50826636 + AT_rich Low_complexity Low_complexity 1 23 0 192 200 0 0 chr2 199861243 199861283 -50826571 + CT-rich Low_complexity Low_complexity 3 42 0 1103 85 0 0 chr2 199861331 199861472 -50826382 - AluSg/x SINE Alu -22 288 148 316 240 115 0 chr2 199861627 199861768 -50826086 + L1MC/D LINE L1 5695 5850 -323 473 257 102 5 chr2 199861790 199861977 -50825877 + L1ME3 LINE L1 5957 6161 -1 296 357 49 22 chr2 199863019 199863148 -50824706 - MIR SINE MIR -44 218 81 1614 189 7 7 chr2 199863148 199863450 -50824404 + AluJb SINE Alu 11 312 0 296 357 49 22 chr2 199863450 199863505 -50824349 - MIR SINE MIR -181 81 29 2491 157 9 2 chr2 199866498 199866930 -50820924 + L1M2 LINE L1 5276 5710 -581 242 179 18 0 chr2 199866930 199866986 -50820868 + (TA)n Simple_repeat Simple_repeat 2 58 0 1814 159 14 3 chr2 199866986 199867269 -50820585 - AluJb SINE Alu -26 286 1 562 285 4 88 chr2 199867712 199867940 -50819914 + MIR SINE MIR 20 228 -34 312 317 0 0 chr2 199868158 199868240 -50819614 - L2 LINE L2 0 3272 3191 2360 46 14 0 chr2 199868327 199868634 -50819220 + AluY SINE Alu 1 311 0 192 321 0 0 chr2 199868647 199868703 -50819151 - L2 LINE L2 -245 3068 3013 275 274 78 49 chr2 199868954 199869056 -50818798 + MER91A DNA MER1_type 92 196 0 872 135 0 0 chr2 199869104 199869230 -50818624 - FLAM_C SINE Alu -7 126 1 1742 259 139 134 chr2 199869412 199870073 -50817781 - L2 LINE L2 -528 2786 2130 939 160 14 0 chr2 199870073 199870242 -50817612 + AluSg/x SINE Alu 136 306 0 1742 259 139 134 chr2 199870242 199870461 -50817393 - L2 LINE L2 -1184 2130 1914 1648 174 14 34 chr2 199870461 199870755 -50817099 + AluJo SINE Alu 1 288 -24 1742 259 139 134 chr2 199870755 199871179 -50816675 - L2 LINE L2 -1400 1914 1329 1881 147 3 33 chr2 199871284 199871591 -50816263 + AluJo SINE Alu 1 298 -14 711 269 97 20 chr2 199872552 199872850 -50815004 + L1ME1 LINE L1 5820 6140 -26 1530 240 92 13 chr2 199874479 199875070 -50812784 - L1ME1 LINE L1 -10 6156 5495 2424 228 140 33 chr2 199875100 199876077 -50811777 - L1ME1 LINE L1 -776 5370 4289 729 136 19 62 chr2 199876635 199876797 -50811057 - L1PA16 LINE L1 0 6166 6012 634 266 81 22 chr2 199876895 199877117 -50810737 + L1M3a LINE L1 14 248 -5707 1974 130 7 0 chr2 199879326 199879603 -50808251 + AluJb SINE Alu 1 279 -33 240 313 39 16 chr2 199880273 199880339 -50807515 + L1ME LINE L1 5414 5477 -689 2204 112 0 19 chr2 199880339 199880476 -50807378 + AluSx SINE Alu 1 139 -173 2395 79 3 0 chr2 199880476 199880780 -50807074 + AluSp SINE Alu 1 305 -8 2204 112 0 19 chr2 199880780 199880954 -50806900 + AluSx SINE Alu 139 306 -6 240 313 39 16 chr2 199880954 199881015 -50806839 + L1ME LINE L1 5477 5544 -622 319 118 20 0 chr2 199881342 199881393 -50806461 - MER75 DNA T2_type 0 514 463 296 232 116 43 chr2 199882047 199882211 -50805643 + MER104 DNA Tc2 5 180 0 729 150 23 23 chr2 199882848 199882981 -50804873 + FLAM_C SINE Alu 1 133 0 2356 108 0 0 chr2 199885014 199885321 -50802533 - AluSg SINE Alu -3 307 1 2375 80 0 0 chr2 199885516 199885804 -50802050 + AluY SINE Alu 2 289 -22 2412 53 0 17 chr2 199886336 199886635 -50801219 + AluY SINE Alu 1 294 -17 22 0 0 0 chr2 199887238 199887260 -50800594 + AT_rich Low_complexity Low_complexity 1 22 0 284 324 162 6 chr2 199887548 199887721 -50800133 + MIR SINE MIR 36 235 -27 724 269 106 19 chr2 199888143 199888407 -50799447 + MLT1H LTR MaLR 17 303 -246 661 216 24 0 chr2 199889300 199889425 -50798429 + MER46A DNA MER2_type 26 153 -83 190 290 22 107 chr2 199889490 199889714 -50798140 + L2 LINE L2 2488 2692 -622 * 277 285 185 15 chr2 199889673 199889873 -50797981 - L3 LINE CR1 -238 1339 1106 1647 158 0 59 chr2 199890893 199891036 -50796818 + AluJb SINE Alu 5 155 -157 1816 180 0 0 chr2 199891036 199891319 -50796535 + AluSx SINE Alu 3 285 -27 477 0 0 0 chr2 199891319 199891372 -50796482 + (CATA)n Simple_repeat Simple_repeat 2 54 0 1647 158 0 59 chr2 199891372 199891530 -50796324 + AluJb SINE Alu 153 289 -23 25 0 0 0 chr2 199891691 199891716 -50796138 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr2 199891956 199891989 -50795865 + AT_rich Low_complexity Low_complexity 1 33 0 719 78 0 0 chr2 199892342 199892444 -50795410 - L1PA13 LINE L1 0 6163 6062 32 26 0 0 chr2 199893731 199893770 -50794084 + AT_rich Low_complexity Low_complexity 1 39 0 1675 181 7 0 chr2 199895470 199895751 -50792103 + AluJb SINE Alu 1 283 -29 1719 160 4 4 chr2 199896626 199896901 -50790953 + AluJb SINE Alu 15 289 -23 477 236 186 0 chr2 199897450 199897590 -50790264 + MER103 DNA DNA 1 166 0 341 24 0 0 chr2 199897605 199897647 -50790207 + HSMAR2 DNA Mariner 5 46 -1256 * 1783 158 3 0 chr2 199897640 199897932 -50789922 + HSMAR2 DNA Mariner 398 690 -612 261 98 0 0 chr2 199897932 199897973 -50789881 + L1MB3 LINE L1 6100 6140 -43 * 8108 206 47 29 chr2 199897972 199898585 -50789269 + L1MB3 LINE L1 16 617 -5767 2058 151 3 0 chr2 199898585 199898889 -50788965 + AluJb SINE Alu 1 305 -7 8108 206 47 29 chr2 199898889 199900021 -50787833 + L1MB3 LINE L1 617 1792 -4592 3418 198 60 6 chr2 199900017 199901441 -50786413 + L1MB3 LINE L1 2070 3579 -2803 * 1917 136 21 179 chr2 199901547 199901884 -50785970 + L1MB3 LINE L1 4146 4390 -1992 307 179 36 0 chr2 199901884 199901940 -50785914 + MER50 LTR ERV1 499 556 -178 1917 136 21 179 chr2 199901940 199902216 -50785638 + L1MB3 LINE L1 4390 4708 -1674 1384 106 44 1 chr2 199902212 199902477 -50785377 - L1P4 LINE L1 -695 5466 5191 * 1012 133 43 5 chr2 199902481 199902669 -50785185 + L1PA13 LINE L1 5965 6159 -4 471 128 23 0 chr2 199902679 199902765 -50785089 + L1MB3 LINE L1 4692 4779 -1603 739 230 7 7 chr2 199902765 199902917 -50784937 + MER2 DNA MER2_type 1 152 -193 1064 119 0 90 chr2 199902918 199903119 -50784735 + Tigger2a DNA MER2_type 2 184 -250 353 179 0 0 chr2 199903155 199903211 -50784643 + MER50 LTR ERV1 499 554 -180 1278 151 42 25 chr2 199903286 199903524 -50784330 + Tigger2a DNA MER2_type 203 444 0 355 251 174 12 chr2 199903526 199903693 -50784161 + MER2 DNA MER2_type 152 345 0 2497 200 20 43 chr2 199903693 199904349 -50783505 + L1MB3 LINE L1 4778 5418 -964 995 147 37 0 chr2 199904359 199904550 -50783304 + L1PB1 LINE L1 3 200 -6663 * 3581 148 262 17 chr2 199904542 199904925 -50782929 + L1PB1 LINE L1 625 913 -5950 1493 212 17 23 chr2 199904925 199905270 -50782584 + MER61A LTR ERV1 1 343 0 3581 148 262 17 chr2 199905270 199905692 -50782162 + L1PB1 LINE L1 913 1627 -5236 12521 166 23 7 chr2 199905695 199909243 -50778611 + L1PB1 LINE L1 3258 6865 -2 4713 165 27 16 chr2 199909253 199909898 -50777956 + L1MB3 LINE L1 5411 6068 -351 2307 104 10 0 chr2 199909898 199910207 -50777647 - AluSx SINE Alu 0 312 1 4713 165 27 16 chr2 199910207 199910559 -50777295 + L1MB3 LINE L1 6068 6415 -4 244 127 18 0 chr2 199910566 199910621 -50777233 + L1MB3 LINE L1 6363 6418 -1 1491 181 7 46 chr2 199910670 199910974 -50776880 - AluJb SINE Alu -20 292 1 395 207 76 25 chr2 199911544 199911580 -50776274 + L1ME3A LINE L1 5264 5297 -869 2416 80 7 0 chr2 199911580 199911880 -50775974 - AluSx SINE Alu -10 302 1 395 207 76 25 chr2 199911880 199912001 -50775853 + L1ME3A LINE L1 5297 5430 -736 335 58 0 0 chr2 199912001 199912053 -50775801 + L1MA7 LINE L1 6222 6273 -18 395 207 76 25 chr2 199912053 199912064 -50775790 + L1ME3A LINE L1 5430 5439 -727 2325 88 7 0 chr2 199912717 199913012 -50774842 - AluSg SINE Alu -13 297 1 647 223 0 16 chr2 199913123 199913244 -50774610 - AluJb SINE Alu -193 119 1 1908 111 34 37 chr2 199913253 199913551 -50774303 - AluSc SINE Alu -12 297 1 27 49 0 0 chr2 199913787 199913828 -50774026 + AT_rich Low_complexity Low_complexity 1 41 0 297 335 31 45 chr2 199914988 199915195 -50772659 - MIR SINE MIR -57 151 3 293 270 46 32 chr2 199916190 199916383 -50771471 + MIR SINE MIR 2 252 -10 485 341 74 0 chr2 199916407 199916624 -50771230 + L3 LINE CR1 431 663 -914 860 277 61 63 chr2 199916857 199917251 -50770603 - L2 LINE L2 0 3313 2921 464 312 140 23 chr2 199917343 199917692 -50770162 + L3 LINE CR1 716 1105 -472 351 0 0 0 chr2 199917943 199917982 -50769872 + (TG)n Simple_repeat Simple_repeat 2 40 0 366 349 163 0 chr2 199918022 199918280 -50769574 + L1ME3A LINE L1 5657 5956 -214 182 138 69 0 chr2 199918282 199918340 -50769514 + (TA)n Simple_repeat Simple_repeat 2 63 0 234 178 151 14 chr2 199918458 199918531 -50769323 + L1MC4 LINE L1 6636 6718 -1324 192 296 165 26 chr2 199918917 199919032 -50768822 + L2 LINE L2 3171 3301 -12 297 276 200 16 chr2 199919728 199919978 -50767876 - HAL1 LINE L1 -760 1747 1452 2242 114 0 0 chr2 199920449 199920746 -50767108 - AluSx SINE Alu -15 297 1 189 271 97 69 chr2 199922964 199923108 -50764746 + L2 LINE L2 1888 2035 -1279 240 311 41 25 chr2 199923114 199923236 -50764618 + L2 LINE L2 2167 2290 -1024 1751 183 47 26 chr2 199923717 199924099 -50763755 + MLT1B LTR MaLR 1 390 0 3125 219 91 18 chr2 199924187 199925074 -50762780 - L1MD2 LINE L1 0 7808 6236 696 231 50 84 chr2 199925075 199925374 -50762480 - MLT1D LTR MaLR -216 289 1 1878 186 32 7 chr2 199925374 199925782 -50762072 - L1MC4a LINE L1 -1228 6580 6163 309 280 42 70 chr2 199926086 199926229 -50761625 + MER102a DNA MER1_type 192 330 0 376 183 0 14 chr2 199926272 199926343 -50761511 + Tigger4(Zombi) DNA MER2_type 2662 2731 0 1724 55 9 23 chr2 199926372 199926591 -50761263 - AluY SINE Alu -11 300 85 535 261 51 28 chr2 199926632 199926808 -50761046 - MIR SINE MIR -30 232 53 307 321 87 33 chr2 199926885 199927069 -50760785 + HAL1 LINE L1 1035 1228 -1279 268 198 12 25 chr2 199927505 199927586 -50760268 + GA-rich Low_complexity Low_complexity 1 80 0 1629 207 50 13 chr2 199927587 199927969 -50759885 + MER63B DNA MER1_type 41 436 0 2346 100 3 0 chr2 199928052 199928353 -50759501 - AluSx SINE Alu -10 302 1 1619 168 16 1 chr2 199929049 199929387 -50758467 + Tigger4(Zombi) DNA MER2_type 1 2731 0 1407 176 3 72 chr2 199929897 199930215 -50757639 - AluJb SINE Alu -3 309 14 5738 121 40 3 chr2 199930254 199931207 -50756647 - L1PA16 LINE L1 -9 6157 5170 251 333 46 9 chr2 199931365 199931473 -50756381 - L2 LINE L2 -5 3308 3197 295 343 17 51 chr2 199931791 199931868 -50755986 - MIR3 SINE MIR -10 198 120 2410 58 3 7 chr2 199931868 199932159 -50755695 + AluY SINE Alu 3 292 -19 295 343 17 51 chr2 199932159 199932256 -50755598 - MIR3 SINE MIR -88 120 30 317 302 129 72 chr2 199932282 199932531 -50755323 + L2 LINE L2 2831 3115 -157 2103 141 47 11 chr2 199932531 199932893 -50754961 + THE1C LTR MaLR 1 375 0 317 302 129 72 chr2 199932893 199933060 -50754794 + L2 LINE L2 3115 3271 -1 1620 174 2 98 chr2 199933909 199934306 -50753548 + MLT1B LTR MaLR 32 390 0 382 227 31 10 chr2 199935611 199935708 -50752146 - LTR67 LTR ERVL -1 556 458 327 49 0 0 chr2 199935971 199936012 -50751842 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 818 116 0 41 chr2 199936203 199936324 -50751530 + AluJb SINE Alu 3 118 -194 692 202 0 0 chr2 199936637 199936761 -50751093 + FLAM_C SINE Alu 1 124 -19 181 370 115 6 chr2 199937286 199937451 -50750403 - L2 LINE L2 -221 3051 2869 237 270 202 0 chr2 199937818 199937891 -50749963 + MLT1K LTR MaLR 154 244 -344 1247 179 90 36 chr2 199937891 199938262 -50749592 - Tigger2 DNA MER2_type 0 2718 1 271 186 68 0 chr2 199938422 199938481 -50749373 + MLT1L LTR MaLR 425 487 -128 1713 168 19 13 chr2 199938591 199938901 -50748953 + AluJb SINE Alu 1 312 0 26 64 0 0 chr2 199939970 199940017 -50747837 + AT_rich Low_complexity Low_complexity 1 47 0 304 241 24 24 chr2 199941266 199941349 -50746505 + MIR SINE MIR 69 151 -111 2110 102 3 0 chr2 199941441 199941725 -50746129 + AluSx SINE Alu 22 306 -6 838 227 35 5 chr2 199941970 199942168 -50745686 + MER3 DNA MER1_type 5 208 -1 332 197 91 0 chr2 199942725 199942791 -50745063 - MLT1D LTR MaLR -428 77 6 1245 330 28 8 chr2 199942830 199943439 -50744415 - HERV16 LTR ERVL -3002 2035 1415 398 249 67 63 chr2 199943500 199943690 -50744164 - L1MEc LINE L1 -4810 1586 1393 222 118 0 0 chr2 199943690 199943724 -50744130 + (TG)n Simple_repeat Simple_repeat 1 34 0 398 249 67 63 chr2 199943724 199943818 -50744036 - L1MEc LINE L1 -5003 1393 1301 183 42 0 0 chr2 199943874 199943898 -50743956 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1791 161 4 0 chr2 199943899 199944178 -50743676 - AluJo SINE Alu -32 280 1 2284 295 90 35 chr2 199944254 199945330 -50742524 - HERV16 LTR ERVL -3771 1225 91 364 291 158 0 chr2 199945462 199945620 -50742234 - MIR SINE MIR -13 249 67 5974 74 94 0 chr2 199946561 199947316 -50740538 + LTR12 LTR ERV1 1 826 0 1070 297 70 44 chr2 199948906 199949559 -50738295 + L2 LINE L2 2622 3313 0 225 359 28 0 chr2 199950006 199950112 -50737742 - MIR3 SINE MIR -1 207 99 1814 173 112 8 chr2 199950207 199950565 -50737289 - MSTD LTR MaLR -1 395 1 2438 60 13 0 chr2 199950634 199950934 -50736920 + AluY SINE Alu 1 304 -7 346 97 97 0 chr2 199951091 199951153 -50736701 - MSTD LTR MaLR -2 394 327 245 260 39 39 chr2 199951357 199951434 -50736420 + MLT1K LTR MaLR 155 231 -357 261 215 46 0 chr2 199951500 199951565 -50736289 + MLT1K LTR MaLR 353 420 -168 2191 235 92 37 chr2 199952822 199953416 -50734438 + L1MD2 LINE L1 4497 5143 -1003 189 0 0 0 chr2 199953416 199953437 -50734417 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 2191 235 92 37 chr2 199953437 199953600 -50734254 + L1MD2 LINE L1 5143 5296 -850 232 244 56 22 chr2 199953604 199953694 -50734160 + L1M4b LINE L1 6 98 -6761 1146 219 115 35 chr2 199953708 199953996 -50733858 + L1M4b LINE L1 193 503 -6356 * 3935 180 62 44 chr2 199953963 199954820 -50733034 + L1MD2 LINE L1 6296 7167 -3 239 278 119 32 chr2 199955121 199955247 -50732607 + MIR SINE MIR 55 191 -71 278 314 25 25 chr2 199955310 199955428 -50732426 - MIR3 SINE MIR -33 175 58 248 369 128 0 chr2 199956542 199956683 -50731171 + L3 LINE CR1 1417 1575 -2 2018 125 3 10 chr2 199956822 199957117 -50730737 + AluSx SINE Alu 1 293 -19 2334 83 13 0 chr2 199957120 199957422 -50730432 + AluSc SINE Alu 1 306 -3 236 178 44 0 chr2 199957539 199957584 -50730270 + MER8 DNA MER2_type 192 238 -1 28 29 0 0 chr2 199957630 199957665 -50730189 + AT_rich Low_complexity Low_complexity 1 35 0 841 101 47 16 chr2 199957665 199957794 -50730060 + FLAM_C SINE Alu 1 133 0 2176 84 3 3 chr2 199957825 199958132 -50729722 - AluSx SINE Alu 0 307 1 2120 108 7 7 chr2 199958795 199959090 -50728764 - AluSq SINE Alu -18 295 1 21 107 0 0 chr2 199959584 199959668 -50728186 + AT_rich Low_complexity Low_complexity 1 84 0 2367 97 3 3 chr2 199959883 199960192 -50727662 + AluSx SINE Alu 1 309 -3 934 269 146 0 chr2 199960193 199960501 -50727353 - L1MC4a LINE L1 -1943 5865 5513 5569 63 35 61 chr2 199961255 199962144 -50725710 + SVA Other Other 1 866 -520 597 52 15 37 chr2 199962162 199962296 -50725558 + SVA Other Other 664 794 -592 6729 64 12 34 chr2 199962310 199963326 -50724528 + SVA Other Other 433 1427 0 2379 62 14 0 chr2 199964975 199965264 -50722590 + AluY SINE Alu 1 293 -18 549 30 0 0 chr2 199965264 199965331 -50722523 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 208 238 12 107 chr2 199965422 199965506 -50722348 - MIR3 SINE MIR -3 205 130 382 243 143 21 chr2 199965776 199965916 -50721938 + MIR SINE MIR 41 197 -65 199 282 47 35 chr2 199966294 199966379 -50721475 - L2 LINE L2 -6 3307 3222 253 365 73 21 chr2 199966480 199966713 -50721141 - MLT1L LTR MaLR -18 597 353 238 275 46 46 chr2 199966765 199966802 -50721052 - MLT1K LTR MaLR -289 299 263 1735 180 0 3 chr2 199966802 199967113 -50720741 + AluJo SINE Alu 1 310 -2 238 275 46 46 chr2 199967113 199967206 -50720648 - MLT1K LTR MaLR -324 264 169 1828 101 90 7 chr2 199968135 199968412 -50719442 + AluSx SINE Alu 1 300 -12 819 197 0 0 chr2 199968697 199968834 -50719020 - FLAM_A SINE Alu 0 142 6 374 114 13 0 chr2 199969647 199969726 -50718128 + (TA)n Simple_repeat Simple_repeat 2 81 0 439 59 15 15 chr2 199971153 199971221 -50716633 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 957 138 0 0 chr2 199971584 199971714 -50716140 + FLAM_C SINE Alu 1 130 -3 1242 89 6 6 chr2 199972497 199972665 -50715189 + L1PA10 LINE L1 6001 6168 0 2147 62 44 7 chr2 199972682 199973007 -50714847 - AluY SINE Alu 0 335 1 23 0 0 0 chr2 199973007 199973030 -50714824 + AT_rich Low_complexity Low_complexity 1 23 0 36 62 0 0 chr2 199973176 199973240 -50714614 + AT_rich Low_complexity Low_complexity 1 64 0 1225 177 19 5 chr2 199973332 199973547 -50714307 - AluJo SINE Alu -94 218 1 436 138 50 0 chr2 199973634 199973714 -50714140 + L1PA8 LINE L1 6088 6171 -1 253 234 9 19 chr2 199974746 199974853 -50713001 + GA-rich Low_complexity Low_complexity 3 108 0 2012 138 7 0 chr2 199974956 199975296 -50712558 + AluSx SINE Alu 1 342 0 1256 167 0 34 chr2 199975720 199975959 -50711895 + AluJo SINE Alu 82 312 0 1136 115 92 0 chr2 199978350 199978524 -50709330 - AluJb SINE Alu -23 289 100 26 0 0 0 chr2 199978531 199978557 -50709297 + AT_rich Low_complexity Low_complexity 1 26 0 828 161 0 56 chr2 199978640 199978783 -50709071 + AluJo SINE Alu 2 136 -176 21 57 0 0 chr2 199978783 199978818 -50709036 + AT_rich Low_complexity Low_complexity 1 35 0 442 272 32 8 chr2 199978928 199979053 -50708801 + MIR SINE MIR 120 247 -15 2080 99 31 10 chr2 199979078 199979370 -50708484 + AluSx SINE Alu 1 298 -14 188 254 18 36 chr2 199979426 199979481 -50708373 + L2 LINE L2 2732 2785 -529 1887 139 34 17 chr2 199979702 199979996 -50707858 + AluSx SINE Alu 1 299 -13 306 0 0 0 chr2 199981282 199981316 -50706538 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1836 120 0 22 chr2 199981319 199981586 -50706268 - AluSx SINE Alu -31 281 21 1720 160 3 20 chr2 199982042 199982336 -50705518 + AluJb SINE Alu 1 289 -23 207 125 0 0 chr2 199983070 199983110 -50704744 + (A)n Simple_repeat Simple_repeat 1 40 0 28 0 0 0 chr2 199983120 199983148 -50704706 + AT_rich Low_complexity Low_complexity 1 28 0 1942 125 7 7 chr2 199983149 199983437 -50704417 - AluSx SINE Alu -24 288 1 29 0 0 0 chr2 199983704 199983733 -50704121 + AT_rich Low_complexity Low_complexity 1 29 0 934 124 0 7 chr2 199983742 199983879 -50703975 - AluSg/x SINE Alu -22 290 155 341 193 0 0 chr2 199983884 199983941 -50703913 - AluS SINE Alu -246 57 1 23 54 0 0 chr2 199984689 199984726 -50703128 + AT_rich Low_complexity Low_complexity 1 37 0 925 178 0 68 chr2 199985256 199985447 -50702407 - AluJ SINE Alu -14 298 121 2175 93 7 3 chr2 199985470 199985759 -50702095 - AluSp SINE Alu -23 290 1 804 180 31 0 chr2 199985762 199985890 -50701964 - AluJ SINE Alu -178 134 3 681 189 9 0 chr2 199986508 199986619 -50701235 + FLAM_A SINE Alu 4 115 -18 345 24 0 0 chr2 199986625 199986667 -50701187 + (CA)n Simple_repeat Simple_repeat 2 43 0 570 81 20 20 chr2 199987596 199987695 -50700159 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 1447 203 52 0 chr2 199987749 199988035 -50699819 + MER58B DNA MER1_type 10 310 -31 2405 73 0 10 chr2 199988035 199988337 -50699517 + AluSq SINE Alu 1 299 -14 199 0 31 31 chr2 199989076 199989108 -50698746 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 5374 170 27 2 chr2 199989399 199990274 -50697580 + MER54A LTR ERVL 5 901 0 714 257 115 15 chr2 199991831 199992055 -50695799 - L1M4 LINE L1 -2944 3202 2931 1305 176 117 15 chr2 199992055 199992328 -50695526 - AluSg SINE Alu -9 301 1 714 257 115 15 chr2 199992328 199992442 -50695412 - L1M4 LINE L1 -3215 2931 2830 752 210 37 103 chr2 199992481 199992551 -50695303 - MER39 LTR ERV1 -25 682 609 1649 148 4 4 chr2 199992551 199992808 -50695046 + AluJo SINE Alu 48 304 -8 752 210 37 103 chr2 199992808 199993009 -50694845 - MER39 LTR ERV1 -98 609 429 252 284 209 8 chr2 199993007 199993141 -50694713 - MER34 LTR ERV1 -377 165 5 * 501 278 31 5 chr2 199993142 199993336 -50694518 - L1M4 LINE L1 -3332 2814 2616 295 171 200 0 chr2 199993342 199993412 -50694442 + L2 LINE L2 3230 3313 0 189 0 0 0 chr2 199993752 199993773 -50694081 + (A)n Simple_repeat Simple_repeat 1 21 0 3103 65 0 0 chr2 199993793 199994164 -50693690 - L1PA8 LINE L1 0 6172 5802 2388 101 0 16 chr2 199994580 199994897 -50692957 - AluSx SINE Alu 0 312 1 2298 106 3 3 chr2 199995808 199996120 -50691734 + AluSq SINE Alu 1 312 -1 1167 139 0 0 chr2 199996256 199996429 -50691425 + AluSg/x SINE Alu 138 310 0 2371 92 3 0 chr2 199996858 199997162 -50690692 + AluSx SINE Alu 1 305 -7 2120 113 0 3 chr2 199997961 199998270 -50689584 - AluSx SINE Alu 0 308 1 338 246 180 59 chr2 199998299 199998604 -50689250 + L3b LINE CR1 1120 1461 -122 237 277 96 24 chr2 199998754 199998837 -50689017 - L2 LINE L2 0 3313 3225 231 344 194 6 chr2 199999888 200000068 -50687786 - MIR SINE MIR -38 224 11 2014 141 0 3 chr2 200000130 200000434 -50687420 + AluJb SINE Alu 1 303 -9 2323 85 0 10 chr2 200000737 200001044 -50686810 + AluSg1 SINE Alu 1 304 -5 351 0 0 0 chr2 200001948 200001987 -50685867 + (CA)n Simple_repeat Simple_repeat 1 39 0 2321 101 0 3 chr2 200002150 200002458 -50685396 + AluSp SINE Alu 1 307 -6 243 250 0 0 chr2 200002470 200002542 -50685312 + A-rich Low_complexity Low_complexity 1 72 0 2219 92 0 38 chr2 200002639 200002956 -50684898 + AluSq SINE Alu 1 305 -8 2209 102 0 13 chr2 200002977 200003280 -50684574 + AluSx SINE Alu 1 299 -13 2467 122 76 52 chr2 200003398 200003490 -50684364 - MER4D LTR ERV1 -432 471 383 2165 116 24 24 chr2 200003490 200003827 -50684027 + MER1B DNA MER1_type 1 337 0 2467 122 76 52 chr2 200003827 200004029 -50683825 - MER4D LTR ERV1 -520 383 160 2223 100 3 7 chr2 200004029 200004329 -50683525 - AluSx SINE Alu -13 299 1 2467 122 76 52 chr2 200004329 200004493 -50683361 - MER4D LTR ERV1 -743 160 1 2340 90 3 3 chr2 200004662 200004972 -50682882 - AluSp SINE Alu -2 311 2 236 304 200 0 chr2 200006307 200006422 -50681432 - MIR3 SINE MIR -27 181 44 299 272 56 48 chr2 200006638 200006763 -50681091 + MIR SINE MIR 4 129 -133 2099 70 4 0 chr2 200007826 200008097 -50679757 - L1P LINE L1 -5792 354 83 276 145 171 0 chr2 200008895 200008971 -50678883 - Charlie4 DNA MER1_type -69 1892 1804 389 288 72 7 chr2 200009058 200009211 -50678643 - Charlie4 DNA MER1_type -1798 163 1 213 265 41 0 chr2 200009227 200009276 -50678578 - L2 LINE L2 -238 3075 3025 187 320 153 27 chr2 200009605 200009755 -50678099 + MIR SINE MIR 28 196 -66 843 144 0 8 chr2 200011414 200011539 -50676315 - FLAM_C SINE Alu -19 124 1 1697 151 20 23 chr2 200012274 200012573 -50675281 - AluJb SINE Alu -14 298 1 312 235 226 0 chr2 200012757 200012859 -50674995 + MER58A DNA MER1_type 4 128 0 547 295 66 37 chr2 200015254 200015498 -50672356 + MIR SINE MIR 5 255 -7 1305 78 12 6 chr2 200015498 200015685 -50672169 - AluSc SINE Alu 0 298 111 230 248 128 51 chr2 200016882 200016999 -50670855 + MIR SINE MIR 111 236 -26 348 229 386 7 chr2 200017015 200017155 -50670699 + MIR SINE MIR 57 249 -13 260 333 151 41 chr2 200017213 200017604 -50670250 - L2 LINE L2 -589 2725 2292 216 303 0 0 chr2 200018890 200018979 -50668875 + A-rich Low_complexity Low_complexity 1 89 0 214 186 0 0 chr2 200019186 200019229 -50668625 + T-rich Low_complexity Low_complexity 1 43 0 702 162 0 0 chr2 200019496 200019601 -50668253 + FLAM_C SINE Alu 23 127 -16 2340 81 3 0 chr2 200020523 200020819 -50667035 - AluY SINE Alu -12 299 3 444 260 116 72 chr2 200022171 200022506 -50665348 + L1ME3 LINE L1 4184 4533 -1613 350 283 194 17 chr2 200022547 200022727 -50665127 + L1ME3 LINE L1 4617 4828 -1318 304 213 52 81 chr2 200022729 200022865 -50664989 + L1ME3 LINE L1 4888 5019 -1127 864 202 57 31 chr2 200022897 200023090 -50664764 - MER3 DNA MER1_type -5 204 7 1327 137 129 7 chr2 200023107 200023396 -50664458 - MER33 DNA MER1_type -13 311 1 1008 265 98 49 chr2 200023431 200024019 -50663835 + L1ME3 LINE L1 5128 5772 -390 1953 148 10 0 chr2 200024019 200024317 -50663537 + AluSx SINE Alu 1 301 -11 1008 265 98 49 chr2 200024317 200024486 -50663368 + L1ME3 LINE L1 5772 5931 -231 263 181 83 14 chr2 200024513 200024585 -50663269 - AluJ/FRAM SINE Alu -3 299 223 522 274 49 39 chr2 200024722 200024926 -50662928 + L2 LINE L2 1816 2021 -1293 938 160 14 0 chr2 200024951 200025095 -50662759 - AluSg/x SINE Alu -29 283 138 1417 281 201 27 chr2 200025096 200026137 -50661717 + L2 LINE L2 2004 3243 -70 351 182 40 71 chr2 200026675 200026774 -50661080 + MLT1F LTR MaLR 1 96 -446 * 593 231 43 24 chr2 200026772 200026938 -50660916 + MLT1H1 LTR MaLR 406 555 0 2101 110 7 0 chr2 200027056 200027348 -50660506 + AluSg SINE Alu 1 294 -16 489 290 32 21 chr2 200027375 200027561 -50660293 - MIR SINE MIR -2 260 73 3340 48 0 0 chr2 200029117 200029531 -50658323 - L1P LINE L1 -1049 5097 4684 25 31 0 0 chr2 200029764 200029796 -50658058 + AT_rich Low_complexity Low_complexity 1 32 0 2280 109 0 0 chr2 200030406 200030699 -50657155 + AluSx SINE Alu 2 294 -18 480 118 0 0 chr2 200032008 200032076 -50655778 + Tigger2 DNA MER2_type 2 69 -2649 * 2596 139 51 7 chr2 200032060 200032493 -50655361 + Tigger2 DNA MER2_type 2267 2718 0 551 314 46 0 chr2 200032685 200032860 -50654994 - MIR SINE MIR -37 225 43 671 102 0 0 chr2 200032923 200033011 -50654843 + AluSg/x SINE Alu 193 280 -29 230 0 0 32 chr2 200033011 200033042 -50654812 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2500 111 42 39 chr2 200033649 200034143 -50653711 - L1MA8 LINE L1 0 6291 5796 22 56 0 0 chr2 200034418 200034454 -50653400 + AT_rich Low_complexity Low_complexity 1 36 0 5639 140 41 24 chr2 200034600 200034746 -50653108 - L1MA3 LINE L1 -26 6279 6137 1957 135 11 0 chr2 200034746 200035027 -50652827 - AluJb SINE Alu -28 284 1 5639 140 41 24 chr2 200035027 200036123 -50651731 - L1MA3 LINE L1 -168 6137 5015 336 280 9 28 chr2 200036227 200036334 -50651520 + ERVL LTR ERVL 4756 4860 -904 336 145 0 36 chr2 200036545 200036628 -50651226 + (TTC)n Simple_repeat Simple_repeat 1 80 0 786 334 90 24 chr2 200036630 200037085 -50650769 + L2 LINE L2 2827 3311 -2 6911 54 6 4 chr2 200037455 200039192 -50648662 - L1PA8 LINE L1 0 6172 4469 5112 49 0 8 chr2 200039563 200040199 -50647655 + L1PA5 LINE L1 5524 6154 0 31104 102 8 31 chr2 200040486 200043344 -50644510 + L1PA7 LINE L1 471 3396 -2758 2404 95 0 13 chr2 200043344 200043659 -50644195 - AluY SINE Alu 0 311 1 31104 102 8 31 chr2 200043659 200044643 -50643211 + L1PA7 LINE L1 3396 4402 -1752 1929 156 0 0 chr2 200044643 200044950 -50642904 + AluSx SINE Alu 1 307 0 31104 102 8 31 chr2 200044950 200046935 -50640919 + L1PA7 LINE L1 4402 6153 -1 973 35 17 0 chr2 200046943 200047058 -50640796 + AluSq/x SINE Alu 12 128 -184 28 0 0 0 chr2 200047058 200047086 -50640768 + AT_rich Low_complexity Low_complexity 1 28 0 246 149 35 0 chr2 200047086 200047145 -50640709 + (TA)n Simple_repeat Simple_repeat 1 90 0 309 218 0 0 chr2 200047486 200047564 -50640290 + GA-rich Low_complexity Low_complexity 2 79 0 323 300 39 8 chr2 200048417 200048547 -50639307 + L2 LINE L2 2349 2482 -832 656 290 81 23 chr2 200049956 200050411 -50637443 + ERVL LTR ERVL 3628 4157 -1425 364 284 86 0 chr2 200050412 200050528 -50637326 + MER94 DNA DNA 1 126 -8 575 222 124 5 chr2 200050694 200050890 -50636964 + ERVL LTR ERVL 4345 4526 -1128 406 335 84 6 chr2 200051390 200051569 -50636285 - MIR SINE MIR -30 232 40 543 16 0 0 chr2 200052139 200052203 -50635651 + (TG)n Simple_repeat Simple_repeat 1 64 0 23 68 0 0 chr2 200053333 200053377 -50634477 + AT_rich Low_complexity Low_complexity 1 44 0 22 56 0 0 chr2 200054021 200054057 -50633797 + AT_rich Low_complexity Low_complexity 1 36 0 2442 89 0 0 chr2 200054143 200054456 -50633398 - AluSq SINE Alu 0 313 1 1198 249 65 66 chr2 200054504 200055072 -50632782 + L2 LINE L2 2752 3310 -3 26 0 0 0 chr2 200056612 200056638 -50631216 + AT_rich Low_complexity Low_complexity 1 26 0 6459 31 4 1 chr2 200056638 200057413 -50630441 - L1PA4 LINE L1 -6 6149 5373 * 15619 35 7 2 chr2 200057412 200059340 -50628514 + L1PA4 LINE L1 3439 5376 -770 2182 126 11 26 chr2 200059340 200059720 -50628134 - L1PA16 LINE L1 0 6166 5793 12406 163 22 24 chr2 200059821 200060521 -50627333 - L1 LINE L1 -1267 6298 5598 2302 72 0 39 chr2 200060521 200060828 -50627026 + AluSg SINE Alu 1 295 -15 12406 163 22 24 chr2 200060828 200063831 -50624023 - L1 LINE L1 -1967 5598 2595 7132 175 91 16 chr2 200063828 200065162 -50622692 - L1 LINE L1 -6115 1450 17 * 215 302 16 0 chr2 200067158 200067221 -50620633 + MIR SINE MIR 82 145 -63 207 314 129 63 chr2 200067270 200067681 -50620173 - L2 LINE L2 -27 3245 2808 407 260 99 97 chr2 200068715 200069127 -50618727 - L2 LINE L2 -16 3256 2844 1878 130 29 29 chr2 200069403 200069710 -50618144 - AluSx SINE Alu -5 307 1 1718 143 50 11 chr2 200069744 200070024 -50617830 + AluSx SINE Alu 1 291 -21 210 213 43 0 chr2 200070026 200070073 -50617781 + GA-rich Low_complexity Low_complexity 1 49 0 32 26 0 0 chr2 200070637 200070676 -50617178 + AT_rich Low_complexity Low_complexity 1 39 0 477 0 0 0 chr2 200070694 200070747 -50617107 + (CA)n Simple_repeat Simple_repeat 2 54 0 21617 156 28 35 chr2 200070985 200076041 -50611813 + L1MA3 LINE L1 17 4990 -2734 2465 122 5 11 chr2 200076041 200076417 -50611437 + THE1C LTR MaLR 2 375 0 21617 156 28 35 chr2 200076417 200079132 -50608722 + L1MA3 LINE L1 4990 7724 0 2288 151 69 2 chr2 200079270 200079675 -50608179 - MSTB1 LTR MaLR 0 432 1 246 286 0 14 chr2 200079864 200079934 -50607920 - MER94 DNA DNA -1 133 65 293 241 69 25 chr2 200080125 200080312 -50607542 + MLT1H LTR MaLR 250 477 -72 1202 93 0 0 chr2 200080331 200080516 -50607338 - AluSc SINE Alu 0 314 130 252 404 60 7 chr2 200080863 200081014 -50606840 - L2 LINE L2 0 3272 3114 291 372 63 35 chr2 200081911 200082341 -50605513 + L2 LINE L2 2841 3282 -31 22 0 0 0 chr2 200083304 200083326 -50604528 + AT_rich Low_complexity Low_complexity 1 22 0 235 226 168 7 chr2 200083507 200083644 -50604210 - L1ME4a LINE L1 -7 6114 5956 318 272 48 10 chr2 200083741 200083844 -50604010 + L2 LINE L2 3192 3298 -15 6191 130 25 10 chr2 200084546 200085577 -50602277 - L1MA6 LINE L1 0 6300 5254 2272 167 61 2 chr2 200085592 200085987 -50601867 + MSTA LTR MaLR 1 418 -10 2720 158 28 12 chr2 200085995 200086380 -50601474 - L1MA6 LINE L1 -901 5245 4868 1762 163 24 10 chr2 200086380 200086668 -50601186 + AluJb SINE Alu 1 292 -20 2720 158 28 12 chr2 200086668 200086775 -50601079 - L1MA6 LINE L1 -1278 4868 4742 405 0 0 0 chr2 200086775 200086820 -50601034 + (TG)n Simple_repeat Simple_repeat 2 46 0 350 272 0 0 chr2 200086858 200086950 -50600904 - L1MC4 LINE L1 -1337 6705 6614 311 281 0 21 chr2 200086878 200086974 -50600880 + L1MC4 LINE L1 6610 6703 -1339 * 184 154 39 0 chr2 200087445 200087497 -50600357 + A-rich Low_complexity Low_complexity 6 59 0 217 203 0 85 chr2 200088556 200088615 -50599239 - L2 LINE L2 -8 3264 3211 2328 100 0 0 chr2 200090936 200091235 -50596619 - AluSc SINE Alu -10 299 1 1573 122 0 0 chr2 200091801 200092039 -50595815 - L1 LINE L1 -1395 4751 4514 2290 99 0 0 chr2 200092436 200092729 -50595125 - AluSx SINE Alu -14 298 6 1931 98 0 18 chr2 200093180 200093455 -50594399 + AluSc SINE Alu 1 270 -39 478 194 10 0 chr2 200093895 200093993 -50593861 + L1PA16 LINE L1 6066 6164 -2 2012 97 41 10 chr2 200094242 200094532 -50593322 + AluY SINE Alu 1 299 -12 752 293 50 87 chr2 200094716 200095715 -50592139 + L1MEd LINE L1 3 964 -5155 1091 152 0 18 chr2 200097322 200097493 -50590361 - FRAM SINE Alu -16 160 1 24 0 0 0 chr2 200097570 200097594 -50590260 + AT_rich Low_complexity Low_complexity 1 24 0 253 286 0 0 chr2 200098597 200098653 -50589201 - L2 LINE L2 0 3313 3258 2290 113 0 0 chr2 200098679 200098980 -50588874 + AluSq SINE Alu 1 301 -12 5961 187 111 74 chr2 200100345 200100618 -50587236 + L1MB7 LINE L1 2734 2995 -3189 1548 174 54 20 chr2 200100618 200100736 -50587118 + AluJb SINE Alu 1 114 -198 207 0 0 0 chr2 200100736 200100759 -50587095 + (CA)n Simple_repeat Simple_repeat 1 23 0 1548 174 54 20 chr2 200100759 200100934 -50586920 + AluJb SINE Alu 114 304 -8 2071 116 0 14 chr2 200100935 200101253 -50586601 + AluY SINE Alu 1 314 0 5961 187 111 74 chr2 200101253 200101860 -50585994 + L1MB7 LINE L1 2995 3578 -2606 189 0 0 0 chr2 200101860 200101881 -50585973 + (CA)n Simple_repeat Simple_repeat 2 22 0 5961 187 111 74 chr2 200101881 200101985 -50585869 + L1MB7 LINE L1 3578 3677 -2507 1666 168 29 0 chr2 200101985 200102259 -50585595 + AluJo SINE Alu 9 290 -22 5961 187 111 74 chr2 200102259 200103479 -50584375 + L1MB7 LINE L1 3677 4850 -1334 2272 135 25 0 chr2 200103479 200103834 -50584020 + THE1B LTR MaLR 1 364 0 5961 187 111 74 chr2 200103834 200104766 -50583088 + L1MB7 LINE L1 4850 6042 -142 2483 156 32 2 chr2 200104766 200105176 -50582678 - MSTB LTR MaLR -1 425 4 5961 187 111 74 chr2 200105176 200105308 -50582546 + L1MB7 LINE L1 6042 6168 -16 1533 194 17 75 chr2 200105532 200106081 -50581773 + L1MA4 LINE L1 5066 5504 -796 2020 153 10 3 chr2 200106081 200106389 -50581465 - AluSx SINE Alu -1 311 2 1533 194 17 75 chr2 200106389 200106660 -50581194 + L1MA4 LINE L1 5504 5789 -511 3081 120 9 25 chr2 200106723 200107248 -50580606 + L1MA4 LINE L1 5773 6289 -11 24 32 0 0 chr2 200109005 200109036 -50578818 + AT_rich Low_complexity Low_complexity 1 31 0 1084 271 130 40 chr2 200110740 200111271 -50576583 - L1MC4a LINE L1 -1871 5937 5359 26 0 0 0 chr2 200112936 200112962 -50574892 + AT_rich Low_complexity Low_complexity 1 26 0 1882 135 3 30 chr2 200112962 200113259 -50574595 - AluSg SINE Alu -21 289 1 359 345 37 51 chr2 200113270 200113566 -50574288 + L1MC/D LINE L1 4537 4828 -1318 269 320 39 0 chr2 200113643 200113771 -50574083 + L1MC/D LINE L1 4883 5015 -1131 21 0 0 0 chr2 200113771 200113792 -50574062 + AT_rich Low_complexity Low_complexity 1 21 0 546 345 71 2 chr2 200114036 200114471 -50573383 + L1MC/D LINE L1 5284 5748 -2060 * 1041 143 11 0 chr2 200114458 200114640 -50573214 + L1M1 LINE L1 2190 2373 -5192 1829 91 4 14 chr2 200114640 200114916 -50572938 + L1MA2 LINE L1 6032 6304 0 28 0 0 0 chr2 200115310 200115338 -50572516 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 200115637 200115665 -50572189 + AT_rich Low_complexity Low_complexity 1 28 0 487 219 0 41 chr2 200115774 200115897 -50571957 + Tigger2a DNA MER2_type 1 118 -316 * 1626 176 63 63 chr2 200115873 200116288 -50571566 + Tigger2 DNA MER2_type 2304 2718 0 2195 129 0 3 chr2 200116554 200116857 -50570997 - AluSx SINE Alu -10 302 1 5159 126 55 45 chr2 200117308 200117483 -50570371 - Tigger1 DNA MER2_type -1 2417 2245 1674 190 7 7 chr2 200117483 200117772 -50570082 + AluJb SINE Alu 1 289 -23 5159 126 55 45 chr2 200117772 200117792 -50570062 - Tigger1 DNA MER2_type -173 2245 2227 2137 127 0 0 chr2 200117792 200118084 -50569770 + AluSx SINE Alu 3 294 -18 5159 126 55 45 chr2 200118084 200118821 -50569033 - Tigger1 DNA MER2_type -191 2227 1475 738 113 23 30 chr2 200118834 200118967 -50568887 - L1PA16 LINE L1 -9 6157 6026 2429 169 22 0 chr2 200118968 200119371 -50568483 + MSTA LTR MaLR 17 428 0 5079 124 61 22 chr2 200119404 200120236 -50567618 - Tigger1 DNA MER2_type -1553 865 1 230 184 0 20 chr2 200120244 200120293 -50567561 + (CATATA)n Simple_repeat Simple_repeat 4 51 0 1574 161 73 36 chr2 200120821 200121151 -50566703 - MER2 DNA MER2_type 0 344 3 270 269 132 96 chr2 200121512 200121731 -50566123 + L2 LINE L2 2985 3211 -61 322 257 106 26 chr2 200121851 200121964 -50565890 - MER5A DNA MER1_type -25 164 43 1020 219 27 27 chr2 200121994 200122218 -50565636 - MER58A DNA MER1_type 0 224 1 215 261 108 0 chr2 200122385 200122450 -50565404 + L2 LINE L2 3241 3312 -1 23 54 0 0 chr2 200123507 200123544 -50564310 + AT_rich Low_complexity Low_complexity 1 37 0 210 37 0 0 chr2 200125193 200125220 -50562634 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 197 175 25 0 chr2 200125391 200125431 -50562423 + MIR3 SINE MIR 168 208 0 497 233 78 39 chr2 200125467 200125647 -50562207 - MIR SINE MIR 0 262 76 1933 159 36 36 chr2 200125993 200126357 -50561497 - THE1B LTR MaLR 0 364 1 12015 82 9 0 chr2 200126357 200127923 -50559931 - THE1A-int LTR MaLR 0 1580 1 1952 157 11 28 chr2 200127924 200128281 -50559573 - THE1A LTR MaLR -1 354 4 2129 230 55 7 chr2 200128441 200129041 -50558813 + L1MB3 LINE L1 3354 3982 -2164 3556 166 45 19 chr2 200129126 200129879 -50557975 - L1MA7 LINE L1 -10 6281 5509 231 182 18 18 chr2 200129888 200129943 -50557911 + L1MB3 LINE L1 4013 4067 -2079 443 215 89 15 chr2 200130044 200130179 -50557675 - MLT1L LTR MaLR -5 610 466 1957 167 140 33 chr2 200130309 200130765 -50557089 + MLT1D LTR MaLR 1 505 0 957 272 97 93 chr2 200130803 200131414 -50556440 - MLT1L LTR MaLR -2 613 1 346 244 173 8 chr2 200131742 200131869 -50555985 - MIR SINE MIR -7 255 108 415 311 39 21 chr2 200133298 200133581 -50554273 + L1ME LINE L1 5518 5805 -316 240 177 32 0 chr2 200134153 200134215 -50553639 - Alu SINE Alu 0 301 238 250 342 97 42 chr2 200134369 200134606 -50553248 + L2 LINE L2 1426 1675 -1639 2176 121 3 0 chr2 200134675 200134981 -50552873 - AluSx SINE Alu -5 307 1 2100 117 0 10 chr2 200135834 200136185 -50551669 + AluSg SINE Alu 1 310 0 438 348 85 3 chr2 200136458 200136740 -50551114 - L1ME3 LINE L1 -218 5944 5640 312 335 76 20 chr2 200136776 200136973 -50550881 - L1ME3 LINE L1 -1301 4845 4638 892 278 80 43 chr2 200137255 200137669 -50550185 + LTR33 LTR ERVL 1 429 -92 472 227 36 9 chr2 200137726 200137836 -50550018 + LTR33 LTR ERVL 409 521 0 187 164 55 0 chr2 200139821 200139876 -50547978 + GA-rich Low_complexity Low_complexity 3 60 0 278 307 28 82 chr2 200140149 200140361 -50547493 - MIR SINE MIR -67 195 2 551 234 0 1 chr2 200141742 200141888 -50545966 + L1MB3 LINE L1 4623 4767 -1379 1229 191 60 48 chr2 200141893 200142199 -50545655 + L1MB3 LINE L1 4901 5213 -933 2315 86 0 13 chr2 200142199 200142502 -50545352 + AluY SINE Alu 1 299 -12 1229 191 60 48 chr2 200142502 200142546 -50545308 + L1MB3 LINE L1 5213 5255 -891 3587 131 48 38 chr2 200142551 200142746 -50545108 + L1MB3 LINE L1 5482 5674 -509 240 111 0 0 chr2 200142746 200142782 -50545072 + (TA)n Simple_repeat Simple_repeat 2 37 0 3587 131 48 38 chr2 200142782 200143274 -50544580 + L1MB3 LINE L1 5674 6176 -7 1364 339 160 31 chr2 200143339 200145224 -50542630 - L2 LINE L2 -584 2730 604 535 290 196 51 chr2 200147063 200147456 -50540398 - L2 LINE L2 -6 3307 2858 472 290 68 68 chr2 200147483 200147790 -50540064 - L2 LINE L2 -643 2671 2365 1563 151 100 4 chr2 200147805 200148076 -50539778 + AluSx SINE Alu 3 299 -13 250 227 0 34 chr2 200148070 200148158 -50539696 + GA-rich Low_complexity Low_complexity 4 88 0 3559 79 19 2 chr2 200148179 200148660 -50539194 - L1PB2 LINE L1 -56 6095 5607 415 118 92 13 chr2 200148787 200148863 -50538991 - MER51D LTR ERV1 -76 581 500 2121 73 13 0 chr2 200149235 200149538 -50538316 - L1PB2 LINE L1 -544 5607 5301 727 268 48 26 chr2 200149538 200149769 -50538085 - L2 LINE L2 -952 2362 2127 1928 137 3 23 chr2 200150235 200150535 -50537319 + AluJb SINE Alu 1 294 -18 393 335 88 0 chr2 200151232 200151426 -50536428 + MIR SINE MIR 32 242 -20 2103 138 7 0 chr2 200152733 200153029 -50534825 + AluSx SINE Alu 1 298 -14 586 214 0 0 chr2 200153261 200153364 -50534490 - FRAM SINE Alu -75 101 1 271 284 207 36 chr2 200153483 200154144 -50533710 + L2 LINE L2 1727 2500 -814 2384 112 8 11 chr2 200154145 200154501 -50533353 + THE1A LTR MaLR 1 355 0 11070 107 15 3 chr2 200154501 200156062 -50531792 + THE1A-int LTR MaLR 1 1580 0 750 106 8 24 chr2 200156062 200156185 -50531669 + THE1A LTR MaLR 1 121 -254 2005 230 87 35 chr2 200156288 200156906 -50530948 + L1ME1 LINE L1 4373 5040 -1106 2242 110 0 3 chr2 200156906 200157198 -50530656 + AluSx SINE Alu 1 291 -21 2005 230 87 35 chr2 200157198 200157349 -50530505 + L1ME1 LINE L1 5040 5182 -964 11973 196 75 43 chr2 200157534 200158032 -50529822 + L1M1 LINE L1 17 498 -6504 2273 114 0 7 chr2 200158032 200158338 -50529516 - AluSq SINE Alu -9 304 1 11973 196 75 43 chr2 200158338 200161522 -50526332 + L1M1 LINE L1 498 3996 -3006 1802 171 34 3 chr2 200161522 200161820 -50526034 + AluSx SINE Alu 3 309 -3 11973 196 75 43 chr2 200161820 200164297 -50523557 + L1M1 LINE L1 3996 6392 -610 591 144 93 0 chr2 200164297 200164412 -50523442 + L1MA5 LINE L1 6161 6289 -11 1426 240 37 12 chr2 200164416 200164959 -50522895 + L1ME1 LINE L1 5195 5752 -414 651 319 8 0 chr2 200164976 200165227 -50522627 + L1ME1 LINE L1 5905 6157 -9 3440 133 25 0 chr2 200165392 200166205 -50521649 + L1PB1 LINE L1 4963 5791 -360 2348 96 3 6 chr2 200166336 200166671 -50521183 + L1PB1 LINE L1 5813 6146 -5 1495 192 39 36 chr2 200166860 200167168 -50520686 + AluJb SINE Alu 1 309 -3 854 139 7 0 chr2 200167168 200167319 -50520535 + GA-rich Low_complexity Low_complexity 1 152 0 344 254 8 0 chr2 200167363 200167481 -50520373 + GA-rich Low_complexity Low_complexity 4 122 0 508 276 97 31 chr2 200167783 200168078 -50519776 + L1MDa LINE L1 2316 2635 -3907 313 231 96 0 chr2 200168115 200168219 -50519635 + L1MEd LINE L1 3 116 -6003 25 65 0 0 chr2 200168787 200168833 -50519021 + AT_rich Low_complexity Low_complexity 1 46 0 28 29 0 0 chr2 200169032 200169067 -50518787 + AT_rich Low_complexity Low_complexity 1 35 0 429 324 12 0 chr2 200170019 200170189 -50517665 - Charlie8 DNA MER1_type -2152 265 94 1911 123 25 6 chr2 200171266 200171584 -50516270 + L1MB3 LINE L1 5848 6171 -12 25 0 0 0 chr2 200171584 200171609 -50516245 + AT_rich Low_complexity Low_complexity 1 25 0 419 284 37 12 chr2 200171865 200172027 -50515827 - MIR3 SINE MIR -37 171 6 2380 67 24 0 chr2 200172563 200172860 -50514994 + AluY SINE Alu 1 304 -7 1150 174 8 13 chr2 200172862 200173097 -50514757 + MER65B LTR ERV1 256 489 -42 501 208 22 90 chr2 200173221 200173399 -50514455 + LTR41 LTR ERVL 496 661 -112 659 201 43 12 chr2 200173399 200173563 -50514291 + MER33 DNA MER1_type 1 169 -155 256 269 34 92 chr2 200173581 200173700 -50514154 - MIR SINE MIR -26 236 125 212 280 0 20 chr2 200173688 200173738 -50514116 - L2 LINE L2 -75 3197 3149 * 493 302 36 75 chr2 200173964 200174295 -50513559 - L2 LINE L2 0 3313 2996 285 254 56 79 chr2 200174401 200174527 -50513327 - MER94 DNA DNA 0 134 12 1615 169 20 20 chr2 200175313 200175608 -50512246 + AluJb SINE Alu 1 295 -17 2333 103 29 37 chr2 200175710 200176088 -50511766 + THE1C LTR MaLR 1 375 0 1808 131 46 14 chr2 200176147 200176429 -50511425 + AluJb SINE Alu 1 291 -21 285 75 0 0 chr2 200176468 200176508 -50511346 + (GAAAA)n Simple_repeat Simple_repeat 3 42 0 2072 76 0 0 chr2 200177237 200177488 -50510366 + AluSx SINE Alu 1 251 -61 201 74 0 0 chr2 200177494 200177521 -50510333 + (A)n Simple_repeat Simple_repeat 1 27 0 478 305 101 19 chr2 200177578 200177886 -50509968 + LTR16C LTR ERVL 127 459 -32 26 64 0 0 chr2 200178182 200178229 -50509625 + AT_rich Low_complexity Low_complexity 1 47 0 392 213 8 66 chr2 200179314 200179436 -50508418 + L1M4 LINE L1 4209 4323 -1823 283 242 0 63 chr2 200179483 200179578 -50508276 + MER21B LTR ERV1 379 467 -396 1934 207 45 7 chr2 200179600 200180155 -50507699 + L1M4 LINE L1 4316 4891 -1255 435 230 124 6 chr2 200180478 200180639 -50507215 + LTR41 LTR ERVL 4 183 -590 2404 80 0 10 chr2 200181011 200181323 -50506531 + AluY SINE Alu 1 309 -2 1510 287 191 33 chr2 200181591 200182035 -50505819 + L2 LINE L2 1577 1950 -1364 1368 134 53 28 chr2 200182035 200182319 -50505535 - L1MA8 LINE L1 -4 6287 5997 1510 287 191 33 chr2 200182319 200182749 -50505105 + L2 LINE L2 1950 2589 -725 1192 333 63 14 chr2 200182993 200183546 -50504308 + L2 LINE L2 661 1240 -2074 712 142 8 24 chr2 200183679 200183806 -50504048 + THE1A LTR MaLR 231 355 0 2146 140 3 0 chr2 200184171 200184478 -50503376 - AluSx SINE Alu -2 310 3 224 361 0 14 chr2 200184702 200184774 -50503080 + L2 LINE L2 2993 3063 -209 1375 163 30 0 chr2 200185128 200185398 -50502456 + L1MC2 LINE L1 6056 6333 -11 714 180 21 52 chr2 200185413 200185607 -50502247 + L1MC1 LINE L1 6138 6325 -8 1761 197 0 3 chr2 200185925 200186234 -50501620 - AluJo SINE Alu -4 308 1 2325 102 3 0 chr2 200186485 200186788 -50501066 - AluSx SINE Alu -8 304 1 685 146 54 15 chr2 200187145 200187275 -50500579 - LTR23 LTR ERV1 0 437 303 934 155 7 26 chr2 200187306 200187461 -50500393 - FRAM SINE Alu -23 153 2 690 166 6 32 chr2 200187461 200187618 -50500236 - LTR23 LTR ERV1 -284 153 1 429 270 125 29 chr2 200187619 200187879 -50499975 - L1M4c LINE L1 -4876 1687 1453 315 0 0 0 chr2 200187879 200187914 -50499940 + (TA)n Simple_repeat Simple_repeat 2 36 0 * 351 0 0 0 chr2 200187913 200187952 -50499902 + (GA)n Simple_repeat Simple_repeat 2 40 0 429 270 125 29 chr2 200187914 200188218 -50499636 - L1M4c LINE L1 -5110 1453 977 39246 62 11 3 chr2 200188221 200194405 -50493449 + L1PA5 LINE L1 74 6222 -1 437 225 134 81 chr2 200194506 200194715 -50493139 + HERV16 LTR ERVL 2110 2329 -2667 1746 115 28 4 chr2 200194717 200194969 -50492885 + AluSx SINE Alu 1 258 -54 507 17 0 0 chr2 200195000 200195060 -50492794 + (CA)n Simple_repeat Simple_repeat 1 60 0 307 277 39 0 chr2 200195212 200195342 -50492512 + L1M4 LINE L1 3340 3474 -2672 1117 197 8 5 chr2 200195368 200195700 -50492154 + MER57A LTR ERV1 10 403 0 410 304 83 0 chr2 200195702 200195968 -50491886 + L1M4 LINE L1 3490 3777 -2369 21 36 0 0 chr2 200196002 200196030 -50491824 + AT_rich Low_complexity Low_complexity 1 28 0 352 200 27 0 chr2 200196058 200196133 -50491721 + MER21B LTR ERV1 20 96 -767 1687 246 40 65 chr2 200196177 200196827 -50491027 + MER21B LTR ERV1 106 739 -124 216 0 0 0 chr2 200199413 200199437 -50488417 + (A)n Simple_repeat Simple_repeat 1 24 0 1770 97 29 7 chr2 200199533 200199811 -50488043 + L1MA5A LINE L1 6014 6297 0 287 221 213 15 chr2 200201014 200201150 -50486704 + MLT1L LTR MaLR 39 201 -414 439 237 74 0 chr2 200201217 200201352 -50486502 + MLT1L LTR MaLR 466 610 -5 436 267 33 0 chr2 200201485 200201605 -50486249 + MIR SINE MIR 122 245 -17 1906 98 0 11 chr2 200201753 200202029 -50485825 - AluSx SINE Alu -39 273 1 704 217 76 5 chr2 200202367 200202551 -50485303 - MIR SINE MIR -2 260 64 2210 96 67 20 chr2 200202772 200203128 -50484726 - THE1C LTR MaLR -2 373 1 763 285 32 4 chr2 200203160 200203413 -50484441 + MIR SINE MIR 2 261 -1 256 301 117 10 chr2 200203670 200203773 -50484081 + MIR SINE MIR 33 146 -62 203 278 19 0 chr2 200203855 200203909 -50483945 - L2 LINE L2 -17 3255 3201 333 0 0 0 chr2 200203963 200204000 -50483854 + (TG)n Simple_repeat Simple_repeat 1 37 0 744 250 63 80 chr2 200204934 200205445 -50482409 + L1ME4a LINE L1 5354 5858 -263 1976 135 0 0 chr2 200205445 200205787 -50482067 - AluSx SINE Alu 0 342 1 744 250 63 80 chr2 200205787 200205814 -50482040 + L1ME4a LINE L1 5858 5884 -237 2538 57 0 0 chr2 200205870 200206166 -50481688 - AluY SINE Alu -15 296 1 22 94 0 0 chr2 200206237 200206301 -50481553 + AT_rich Low_complexity Low_complexity 1 64 0 291 284 120 43 chr2 200206672 200206721 -50481133 + MIR SINE MIR 39 83 -179 1114 203 129 15 chr2 200206721 200207046 -50480808 + MLT1A1 LTR MaLR 4 365 0 291 284 120 43 chr2 200207046 200207204 -50480650 + MIR SINE MIR 83 262 0 315 0 0 0 chr2 200207387 200207422 -50480432 + (TG)n Simple_repeat Simple_repeat 2 36 0 297 0 0 0 chr2 200207603 200207636 -50480218 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 260 219 184 9 chr2 200209097 200209211 -50478643 - L1ME4a LINE L1 -8 6113 5980 2849 55 6 3 chr2 200209214 200209578 -50478276 - L1PA8 LINE L1 -1 6171 5807 233 163 0 0 chr2 200210017 200210066 -50477788 + L1M LINE L1 5256 5304 -860 1875 176 0 7 chr2 200210066 200210362 -50477492 + AluJb SINE Alu 1 294 -18 1837 155 0 28 chr2 200210427 200210745 -50477109 + AluJo SINE Alu 1 310 0 1795 160 9 31 chr2 200211040 200211359 -50476495 - AluJo SINE Alu 0 312 1 457 309 74 12 chr2 200211504 200211666 -50476188 + MIR SINE MIR 20 191 -71 1811 142 11 4 chr2 200212956 200213263 -50474591 - AluJb SINE Alu 0 309 1 306 0 0 0 chr2 200213363 200213397 -50474457 + (TG)n Simple_repeat Simple_repeat 2 35 0 238 331 62 0 chr2 200213955 200214100 -50473754 - MER103 DNA DNA -12 154 1 278 290 19 9 chr2 200214160 200214267 -50473587 - MLT1L LTR MaLR 0 615 508 2134 116 6 25 chr2 200215534 200215852 -50472002 - AluSq SINE Alu -1 312 1 1638 202 10 0 chr2 200215853 200216145 -50471709 - AluJo SINE Alu -17 295 1 2570 65 0 0 chr2 200216369 200216678 -50471176 - AluY SINE Alu -2 309 1 719 166 104 6 chr2 200216945 200217108 -50470746 + MER58A DNA MER1_type 45 223 -1 1290 244 26 20 chr2 200217686 200218033 -50469821 - MER82 DNA MER2_type -24 629 281 1179 33 13 13 chr2 200218033 200218186 -50469668 - LTR19C LTR ERV1 0 779 627 414 86 0 0 chr2 200218199 200218257 -50469597 + AluSg/x SINE Alu 167 224 -86 2645 128 34 14 chr2 200218257 200218703 -50469151 - LTR19C LTR ERV1 -161 618 164 1392 139 4 4 chr2 200218842 200219100 -50468754 - HUERS-P3 LTR ERV1 -1 6995 6738 1224 75 6 6 chr2 200219218 200219410 -50468444 + AluSc SINE Alu 119 310 0 16050 186 42 56 chr2 200219439 200219855 -50467999 - HUERS-P3 LTR ERV1 -756 6662 6242 2150 126 7 0 chr2 200219855 200220157 -50467697 - AluSx SINE Alu -8 304 1 16050 186 42 56 chr2 200220157 200224117 -50463737 - HUERS-P3 LTR ERV1 -1176 6242 2437 1672 95 13 17 chr2 200224117 200224349 -50463505 + AluSg/x SINE Alu 71 301 -11 16050 186 42 56 chr2 200224349 200225643 -50462211 - HUERS-P3 LTR ERV1 -4981 2437 1127 1113 184 44 44 chr2 200225671 200225921 -50461933 - HUERS-P3 LTR ERV1 -6613 2306 2057 2121 295 54 24 chr2 200225928 200226985 -50460869 - HUERS-P3 LTR ERV1 -5878 1118 30 3517 119 56 10 chr2 200227014 200227604 -50460250 - LTR19C LTR ERV1 0 779 163 1224 163 83 0 chr2 200227744 200227996 -50459858 - MER82 DNA MER2_type -380 273 1 27 73 0 0 chr2 200228440 200228495 -50459359 + AT_rich Low_complexity Low_complexity 1 55 0 1351 169 143 27 chr2 200228853 200229154 -50458700 + MER1B DNA MER1_type 1 336 -1 229 293 0 0 chr2 200229762 200229820 -50458034 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 770 283 77 20 chr2 200231787 200232034 -50455820 - MIR SINE MIR -1 261 1 211 157 39 0 chr2 200232102 200232153 -50455701 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 413 293 99 21 chr2 200232171 200232413 -50455441 - L1MC4a LINE L1 -1913 5895 5635 2197 129 0 0 chr2 200232476 200232778 -50455076 - AluSg SINE Alu -8 302 1 1318 103 16 5 chr2 200232868 200233052 -50454802 - AluY SINE Alu -9 302 117 2032 130 49 0 chr2 200234210 200234495 -50453359 - AluSg SINE Alu -11 299 1 21 71 0 0 chr2 200234902 200234944 -50452910 + AT_rich Low_complexity Low_complexity 1 42 0 2156 111 3 14 chr2 200235048 200235345 -50452509 - AluSq SINE Alu -19 294 1 190 361 0 42 chr2 200236943 200237015 -50450839 - L2 LINE L2 -200 3072 3004 763 171 16 0 chr2 200237044 200237173 -50450681 + FLAM_A SINE Alu 1 131 -2 21 0 0 0 chr2 200237173 200237194 -50450660 + AT_rich Low_complexity Low_complexity 1 21 0 2502 75 10 0 chr2 200237196 200237504 -50450350 + AluY SINE Alu 1 311 0 196 301 0 36 chr2 200238181 200238264 -50449590 - L2 LINE L2 -1034 2280 2201 2100 143 10 0 chr2 200239213 200239513 -50448341 + AluSx SINE Alu 1 303 -9 189 211 0 0 chr2 200239657 200239709 -50448145 + (TA)n Simple_repeat Simple_repeat 2 53 0 282 274 69 0 chr2 200239718 200239820 -50448034 - MIR SINE MIR -58 204 96 180 0 0 0 chr2 200239899 200239919 -50447935 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 189 320 0 0 chr2 200239999 200240049 -50447805 + MIR SINE MIR 57 106 -156 329 223 43 53 chr2 200240250 200240344 -50447510 + L2 LINE L2 3221 3313 0 2332 86 7 0 chr2 200240724 200241015 -50446839 - AluSc SINE Alu -16 293 1 584 272 163 48 chr2 200241120 200241624 -50446230 + Charlie7 DNA MER1_type 59 620 -1992 556 230 120 30 chr2 200241863 200242063 -50445791 + MIR SINE MIR 1 218 -44 198 311 0 0 chr2 200242098 200242143 -50445711 + MIR SINE MIR 205 249 -13 2147 103 0 3 chr2 200242151 200242451 -50445403 - AluY SINE Alu -12 299 1 273 203 0 0 chr2 200242783 200242842 -50445012 + L1ME4a LINE L1 6060 6118 -3 309 89 0 0 chr2 200243167 200243212 -50444642 + (A)n Simple_repeat Simple_repeat 1 45 0 315 258 22 22 chr2 200243872 200243961 -50443893 + MIR SINE MIR 168 256 -6 2192 71 46 0 chr2 200244238 200244518 -50443336 - AluY SINE Alu -18 293 1 2201 104 0 3 chr2 200245095 200245394 -50442460 - AluY SINE Alu -13 298 1 1849 263 156 43 chr2 200245431 200245933 -50441921 + L1MC4a LINE L1 5564 6008 -1800 806 122 0 58 chr2 200245933 200246072 -50441782 - FLAM_C SINE Alu -2 131 1 1849 263 156 43 chr2 200246072 200246822 -50441032 + L1MC4a LINE L1 6008 6957 -851 1965 107 7 0 chr2 200246943 200247214 -50440640 + AluSc SINE Alu 1 273 -36 324 0 0 0 chr2 200247214 200247250 -50440604 + (CAA)n Simple_repeat Simple_repeat 1 36 0 392 247 103 0 chr2 200247256 200247430 -50440424 + L1MC4 LINE L1 7260 7451 -591 356 256 12 49 chr2 200247436 200247600 -50440254 + L1MC4 LINE L1 7882 8039 -3 1771 113 60 0 chr2 200249908 200250156 -50437698 + AluSx SINE Alu 39 301 -11 2117 132 0 0 chr2 200251717 200252020 -50435834 + AluY SINE Alu 1 303 -8 23 0 0 0 chr2 200252226 200252249 -50435605 + AT_rich Low_complexity Low_complexity 1 23 0 390 302 50 14 chr2 200252503 200252642 -50435212 + L2 LINE L2 3167 3310 -3 425 279 14 61 chr2 200253930 200254077 -50433777 + L3 LINE CR1 1437 1576 -1 234 91 0 0 chr2 200254095 200254128 -50433726 + (A)n Simple_repeat Simple_repeat 1 33 0 2281 117 3 0 chr2 200254327 200254634 -50433220 - AluSg SINE Alu -2 308 1 183 156 0 0 chr2 200255217 200255249 -50432605 + T-rich Low_complexity Low_complexity 1 32 0 188 204 136 0 chr2 200255286 200255330 -50432524 - L2 LINE L2 -5 3267 3218 * 699 216 5 80 chr2 200255305 200255434 -50432420 - MIR SINE MIR -37 225 115 1580 171 31 10 chr2 200255434 200255726 -50432128 + AluJb SINE Alu 1 298 -14 699 216 5 80 chr2 200255726 200255795 -50432059 - MIR SINE MIR -147 115 42 1821 177 0 3 chr2 200256574 200256895 -50430959 + AluJo SINE Alu 1 320 0 229 267 33 0 chr2 200257116 200257176 -50430678 + L2 LINE L2 3209 3270 -2 411 138 0 0 chr2 200257576 200257634 -50430220 + AluJ/FRAM SINE Alu 231 288 -24 243 293 27 13 chr2 200257790 200257865 -50429989 + MIR SINE MIR 41 116 -146 1063 138 16 14 chr2 200257865 200258185 -50429669 + MLT1B LTR MaLR 1 358 -32 397 210 63 49 chr2 200258340 200258483 -50429371 - L1ME LINE L1 -613 5557 5413 21 107 0 0 chr2 200259628 200259712 -50428142 + AT_rich Low_complexity Low_complexity 1 84 0 394 282 59 41 chr2 200259860 200260030 -50427824 + L2 LINE L2 2918 3090 -182 193 342 13 13 chr2 200260118 200260194 -50427660 + L2 LINE L2 3234 3309 -4 2359 61 34 0 chr2 200261887 200262183 -50425671 - AluSg SINE Alu -4 306 1 22 0 0 0 chr2 200263917 200263939 -50423915 + GC_rich Low_complexity Low_complexity 1 22 0 279 217 30 42 chr2 200264500 200264666 -50423188 + (CGGGG)n Simple_repeat Simple_repeat 5 168 0 1960 187 51 11 chr2 200266617 200266992 -50420862 + MLT1B LTR MaLR 1 390 0 1670 144 82 27 chr2 200267825 200268164 -50419690 - Charlie5 DNA MER1_type -4 2620 2258 2128 125 0 7 chr2 200268164 200268460 -50419394 + AluSx SINE Alu 2 295 -17 1670 144 82 27 chr2 200268460 200268487 -50419367 - Charlie5 DNA MER1_type -366 2258 2234 336 188 94 12 chr2 200268494 200268579 -50419275 - Charlie5 DNA MER1_type -2495 117 26 450 308 17 29 chr2 200268654 200268826 -50419028 - MIR3 SINE MIR -9 199 30 612 210 237 11 chr2 200269334 200269520 -50418334 + MIR SINE MIR 14 241 -21 225 329 27 0 chr2 200269573 200269646 -50418208 + L2 LINE L2 3232 3306 -7 4029 148 161 108 chr2 200270543 200271027 -50416827 + L1MC3 LINE L1 6602 7059 -726 427 198 30 10 chr2 200271027 200271128 -50416726 + MLT1F1 LTR MaLR 35 137 -430 4029 148 161 108 chr2 200271128 200271668 -50416186 + L1MC3 LINE L1 7059 7785 0 1941 169 145 10 chr2 200272127 200272540 -50415314 + L1MC3 LINE L1 7317 7785 0 438 178 56 11 chr2 200272925 200273015 -50414839 + Charlie1 DNA MER1_type 2667 2760 -1 803 281 146 42 chr2 200273055 200273554 -50414300 + LTR67 LTR ERVL 4 554 -3 1817 139 84 0 chr2 200273720 200273839 -50414015 + AluJb SINE Alu 1 109 -203 288 0 0 0 chr2 200273839 200273871 -50413983 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1817 139 84 0 chr2 200273871 200274038 -50413816 + AluJb SINE Alu 109 311 -1 253 173 102 110 chr2 200275514 200275641 -50412213 - MIR SINE MIR -51 211 86 408 287 100 7 chr2 200276265 200276413 -50411441 - MIR SINE MIR -63 145 30 507 295 236 10 chr2 200276709 200276997 -50410857 + L2 LINE L2 2960 3312 -1 2081 122 0 0 chr2 200277263 200277541 -50410313 + AluSg SINE Alu 11 288 -22 277 103 0 0 chr2 200277541 200277580 -50410274 - MADE1 DNA Mariner -41 39 1 309 235 82 0 chr2 200277634 200277719 -50410135 - MIR SINE MIR -118 144 53 1949 153 7 0 chr2 200277780 200278068 -50409786 + AluJb SINE Alu 1 290 -22 1860 253 77 15 chr2 200278093 200278350 -50409504 - L1ME3 LINE L1 0 6162 5922 2031 105 6 57 chr2 200278350 200278664 -50409190 - AluSg SINE Alu -12 298 1 1860 253 77 15 chr2 200278664 200279071 -50408783 - L1ME3 LINE L1 -240 5922 5457 2368 92 3 0 chr2 200279616 200279911 -50407943 - L1PA10 LINE L1 -9 6159 5864 236 282 30 44 chr2 200280034 200280166 -50407688 + MIR SINE MIR 17 146 -71 399 286 18 9 chr2 200280268 200280380 -50407474 - MIR SINE MIR -121 141 29 337 277 157 19 chr2 200280525 200280684 -50407170 + MIR SINE MIR 81 261 -1 367 320 83 33 chr2 200281445 200281626 -50406228 + L2 LINE L2 3118 3307 -6 2161 104 3 19 chr2 200281650 200281959 -50405895 - AluSg SINE Alu -6 304 1 270 0 0 0 chr2 200281965 200281995 -50405859 + (TTA)n Simple_repeat Simple_repeat 1 30 0 313 291 48 0 chr2 200282079 200282182 -50405672 - MIR SINE MIR -71 191 84 280 239 171 0 chr2 200282309 200282397 -50405457 - MIR SINE MIR -122 140 38 234 271 0 14 chr2 200282678 200282748 -50405106 - L2 LINE L2 -293 3020 2952 915 136 0 7 chr2 200282786 200282926 -50404928 - L1MB4 LINE L1 0 6180 6042 3107 92 32 9 chr2 200282929 200283364 -50404490 + MLT2A2 LTR ERVL 1 445 -8 340 165 136 51 chr2 200283400 200283422 -50404432 - L1MB4 LINE L1 -187 5996 5977 2161 122 7 0 chr2 200283422 200283716 -50404138 - AluSx SINE Alu -15 297 2 340 165 136 51 chr2 200283716 200283869 -50403985 - L1MB4 LINE L1 -206 5977 5806 263 28 28 0 chr2 200284259 200284295 -50403559 + (CA)n Simple_repeat Simple_repeat 2 38 0 424 48 32 0 chr2 200284340 200284403 -50403451 + (CA)n Simple_repeat Simple_repeat 2 66 0 279 325 0 0 chr2 200285045 200285125 -50402729 + L2 LINE L2 3234 3313 0 602 253 34 17 chr2 200286298 200286476 -50401378 + MIR SINE MIR 16 196 -66 463 291 103 6 chr2 200286773 200286948 -50400906 + MLT1J LTR MaLR 115 306 -205 2927 110 76 86 chr2 200286984 200287564 -50400290 - MER4B LTR ERV1 -36 574 1 1122 105 0 13 chr2 200287600 200287752 -50400102 + AluY SINE Alu 1 150 -161 2321 64 0 3 chr2 200287903 200288214 -50399640 - AluY SINE Alu 0 310 1 230 271 0 0 chr2 200288245 200288304 -50399550 + L2 LINE L2 3244 3302 -11 2429 244 55 2 chr2 200288350 200288931 -50398923 + MLT1E2 LTR MaLR 13 624 -2 217 196 232 0 chr2 200289254 200289310 -50398544 - L2 LINE L2 -13 3300 3232 227 244 0 22 chr2 200289745 200289835 -50398019 + GA-rich Low_complexity Low_complexity 3 90 0 433 182 11 59 chr2 200291068 200291255 -50396599 + C-rich Low_complexity Low_complexity 2 179 0 8065 141 4 24 chr2 200291401 200293187 -50394667 - L1PA10 LINE L1 -339 5829 4076 322 267 12 36 chr2 200293433 200293598 -50394256 + CT-rich Low_complexity Low_complexity 5 165 0 199 292 0 0 chr2 200295398 200295446 -50392408 + L2 LINE L2 3251 3298 -15 224 282 13 26 chr2 200295448 200295526 -50392328 + (TGGA)n Simple_repeat Simple_repeat 2 78 0 2099 120 3 0 chr2 200296179 200296471 -50391383 + AluSx SINE Alu 1 293 -19 97 81 0 0 chr2 200296572 200296795 -50391059 + GC_rich Low_complexity Low_complexity 1 223 0 53 63 0 0 chr2 200296821 200296916 -50390938 + GC_rich Low_complexity Low_complexity 1 95 0 211 315 0 0 chr2 200297092 200297146 -50390708 - MER5A DNA MER1_type -24 165 112 224 312 43 11 chr2 200297185 200297278 -50390576 + MER5A DNA MER1_type 73 168 -21 272 250 62 25 chr2 200297197 200297277 -50390577 - MER5B DNA MER1_type -75 103 21 2298 97 0 35 chr2 200297599 200297918 -50389936 - AluSq SINE Alu -5 308 1 279 277 53 11 chr2 200298523 200298617 -50389237 + MIR SINE MIR 111 208 -54 515 208 0 20 chr2 200298939 200299040 -50388814 + MER63 DNA MER1_type 13 737 -99 2221 101 0 10 chr2 200299100 200299407 -50388447 + AluY SINE Alu 1 304 -7 1795 153 0 57 chr2 200299906 200300220 -50387634 + AluJo SINE Alu 2 297 -15 1261 201 21 18 chr2 200301124 200301408 -50386446 - MER96B DNA MER1_type? 0 417 133 243 79 0 0 chr2 200302012 200302050 -50385804 + (A)n Simple_repeat Simple_repeat 1 38 0 340 211 26 0 chr2 200304198 200304274 -50383580 - MER63 DNA MER1_type 0 1061 984 1742 144 83 0 chr2 200306879 200307143 -50380711 - AluSx SINE Alu -26 286 1 452 328 153 24 chr2 200307161 200307865 -50379989 - L2 LINE L2 -556 2758 1964 815 151 0 8 chr2 200307879 200308005 -50379849 + AluJb SINE Alu 162 286 -26 287 313 86 37 chr2 200308009 200308252 -50379602 - L2 LINE L2 -1354 1960 1706 400 311 143 12 chr2 200308495 200308656 -50379198 + MIR SINE MIR 74 255 -7 415 311 16 26 chr2 200308922 200309112 -50378742 - MER5A DNA MER1_type 0 189 2 471 339 52 17 chr2 200309355 200309529 -50378325 - MIR3 SINE MIR -3 205 26 189 0 0 0 chr2 200309532 200309553 -50378301 + (CA)n Simple_repeat Simple_repeat 2 22 0 669 269 72 92 chr2 200314065 200314414 -50373440 + L2 LINE L2 2931 3272 0 2365 142 56 15 chr2 200315362 200315771 -50372083 + MSTB LTR MaLR 1 426 0 361 360 70 57 chr2 200315774 200316088 -50371766 + L2 LINE L2 2950 3267 -5 215 261 0 0 chr2 200316365 200316411 -50371443 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 21 57 0 0 chr2 200318508 200318543 -50369311 + AT_rich Low_complexity Low_complexity 1 35 0 2103 119 3 0 chr2 200319307 200319593 -50368261 + AluSc SINE Alu 7 293 -16 526 273 47 0 chr2 200320607 200320735 -50367119 - L2 LINE L2 -2 3270 3137 385 290 103 65 chr2 200323521 200323676 -50364178 - L2 LINE L2 0 3272 3112 2262 84 0 10 chr2 200323992 200324290 -50363564 - AluY SINE Alu -16 295 1 858 230 67 0 chr2 200324345 200324554 -50363300 - MER58A DNA MER1_type 0 224 2 309 281 49 79 chr2 200324605 200324808 -50363046 + MIR3 SINE MIR 6 202 -6 23 0 0 0 chr2 200326982 200327005 -50360849 + AT_rich Low_complexity Low_complexity 1 23 0 482 288 150 18 chr2 200327091 200327317 -50360537 + MIR SINE MIR 2 257 -5 229 172 31 0 chr2 200327894 200327958 -50359896 + L1MA8 LINE L1 6226 6291 0 308 222 14 0 chr2 200328692 200328764 -50359090 + MER112 DNA MER1_type 1 73 -187 24 0 0 0 chr2 200329254 200329278 -50358576 + AT_rich Low_complexity Low_complexity 1 24 0 1564 193 55 72 chr2 200330333 200330805 -50357049 + MER31B LTR ERV1 1 464 -2 21 36 0 0 chr2 200332846 200332874 -50354980 + AT_rich Low_complexity Low_complexity 1 28 0 774 179 0 21 chr2 200333437 200333582 -50354272 - FLAM_C SINE Alu -1 142 1 1517 127 0 19 chr2 200333617 200333830 -50354024 + AluSq SINE Alu 1 209 -104 2231 92 20 3 chr2 200334211 200334503 -50353351 + AluSc SINE Alu 1 297 -12 3108 142 15 4 chr2 200335254 200335798 -50352056 - L1P LINE L1 -2358 3788 3239 656 310 126 47 chr2 200335805 200336336 -50351518 + L2 LINE L2 2458 3123 -190 189 0 0 0 chr2 200336336 200336357 -50351497 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 656 310 126 47 chr2 200336357 200336560 -50351294 + L2 LINE L2 3123 3308 -5 299 373 72 38 chr2 200336909 200337201 -50350653 + L2 LINE L2 2935 3236 -36 247 137 147 168 chr2 200337232 200337327 -50350527 - L3 LINE CR1 -280 1297 1205 21 82 0 0 chr2 200337597 200337646 -50350208 + AT_rich Low_complexity Low_complexity 1 49 0 1380 214 62 14 chr2 200337945 200338292 -50349562 + MLT1A1 LTR MaLR 1 431 -1 217 329 25 0 chr2 200338301 200338380 -50349474 + MIR SINE MIR 181 261 -1 1679 110 72 6 chr2 200338545 200338864 -50348990 + L1PA11 LINE L1 5835 6174 0 266 246 0 0 chr2 200338899 200338964 -50348890 + MER63C DNA MER1_type 11 75 -855 278 220 0 11 chr2 200338971 200339062 -50348792 + (TA)n Simple_repeat Simple_repeat 1 90 0 650 162 295 30 chr2 200339115 200339386 -50348468 + MER63C DNA MER1_type 183 525 -405 331 169 31 0 chr2 200339404 200339456 -50348398 - MER58A DNA MER1_type -7 217 164 397 200 90 0 chr2 200339456 200339556 -50348298 - MER58A DNA MER1_type 0 111 3 555 213 33 0 chr2 200339556 200339678 -50348176 + MER63C DNA MER1_type 518 643 -287 182 242 61 45 chr2 200339712 200339778 -50348076 + L3 LINE CR1 1434 1500 -77 2474 54 0 3 chr2 200339787 200340084 -50347770 - AluY SINE Alu -15 296 1 314 222 40 71 chr2 200340102 200340201 -50347653 - MER5A DNA MER1_type -34 144 49 265 228 7 161 chr2 200340123 200340272 -50347582 + MER5A DNA MER1_type 63 188 -1 * 1830 35 0 13 chr2 200340999 200341228 -50346626 + L1PA5 LINE L1 5923 6148 -6 25 0 0 0 chr2 200343789 200343814 -50344040 + AT_rich Low_complexity Low_complexity 1 25 0 1794 143 0 57 chr2 200344250 200344564 -50343290 - AluJo SINE Alu -14 298 3 584 299 43 39 chr2 200344677 200344931 -50342923 + MIR SINE MIR 8 262 0 1989 135 0 4 chr2 200345131 200345412 -50342442 - AluSx SINE Alu -32 280 1 21 0 0 0 chr2 200347651 200347672 -50340182 + AT_rich Low_complexity Low_complexity 1 21 0 221 395 0 51 chr2 200348057 200348252 -50339602 + L2 LINE L2 2905 3089 -183 551 42 0 0 chr2 200348302 200348373 -50339481 - L1PA5 LINE L1 -3 6151 6081 180 280 20 0 chr2 200349020 200349070 -50338784 + MIR SINE MIR 132 182 -80 864 227 19 1 chr2 200349141 200349333 -50338521 + MIR SINE MIR 1 197 -62 2018 170 0 0 chr2 200349710 200350016 -50337838 + 7SLRNA srpRNA srpRNA 3 308 -12 439 280 166 52 chr2 200351490 200351815 -50336039 + L2 LINE L2 2947 3308 -5 635 291 91 4 chr2 200351935 200352165 -50335689 + MIR SINE MIR 3 252 -10 2068 105 0 65 chr2 200352601 200352925 -50334929 - AluSc SINE Alu -6 303 1 2015 130 3 3 chr2 200353424 200353723 -50334131 + AluSx SINE Alu 1 299 -13 271 303 56 0 chr2 200355628 200355717 -50332137 - L2 LINE L2 -17 3296 3203 1510 171 0 0 chr2 200356604 200356843 -50331011 - AluSg SINE Alu -10 300 62 270 231 0 0 chr2 200357609 200357661 -50330193 + L2 LINE L2 3187 3238 -34 294 252 140 9 chr2 200357931 200358038 -50329816 - MIR SINE MIR -108 154 34 194 189 0 19 chr2 200358085 200358138 -50329716 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 212 143 24 0 chr2 200359220 200359262 -50328592 + CT-rich Low_complexity Low_complexity 3 45 0 476 311 90 16 chr2 200359302 200359546 -50328308 - MLT1I LTR MaLR -3 406 145 201 330 57 23 chr2 200359580 200359668 -50328186 + L2 LINE L2 3177 3267 -5 4553 78 2 13 chr2 200360649 200361275 -50326579 + L1PA10 LINE L1 5549 6167 -1 228 174 35 58 chr2 200362011 200362097 -50325757 + A-rich Low_complexity Low_complexity 5 88 0 2544 68 9 3 chr2 200362211 200362613 -50325241 - L1P4 LINE L1 -555 5613 5210 186 211 67 111 chr2 200363504 200363594 -50324260 - L3 LINE CR1 -1249 328 243 192 152 0 0 chr2 200363685 200363718 -50324136 + T-rich Low_complexity Low_complexity 1 33 0 265 77 0 0 chr2 200363832 200363871 -50323983 - tRNA-Gly-GGG tRNA tRNA -35 39 1 4371 160 82 8 chr2 200364069 200365008 -50322846 - L1MC3 LINE L1 -16 7769 6762 1751 188 57 3 chr2 200366245 200366581 -50321273 - MLT1A1 LTR MaLR -1 364 11 2181 109 6 3 chr2 200366954 200367266 -50320588 - AluSq SINE Alu 0 313 1 244 250 0 0 chr2 200368125 200368181 -50319673 + (TA)n Simple_repeat Simple_repeat 2 57 0 472 269 85 31 chr2 200368361 200368584 -50319270 + MER102a DNA MER1_type 95 329 -1 197 32 0 32 chr2 200368816 200368847 -50319007 + (TAAAAA)n Simple_repeat Simple_repeat 5 34 0 1766 160 10 7 chr2 200371796 200372090 -50315764 + AluJb SINE Alu 1 295 -17 1697 133 66 14 chr2 200372099 200372385 -50315469 + AluJb SINE Alu 7 307 -5 25 0 0 0 chr2 200372645 200372670 -50315184 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr2 200376124 200376154 -50311700 + AT_rich Low_complexity Low_complexity 1 30 0 500 288 93 9 chr2 200377242 200377457 -50310397 + MIR SINE MIR 2 234 -28 2275 133 3 6 chr2 200377662 200378024 -50309830 - MER46B DNA MER2_type 0 236 1 260 264 0 38 chr2 200378455 200378561 -50309293 - L1M LINE L1 -697 5424 5323 942 170 21 0 chr2 200378576 200378770 -50309084 - L1MB3 LINE L1 -3 6180 5983 345 188 47 27 chr2 200378864 200379013 -50308841 + (GGGTG)n Simple_repeat Simple_repeat 3 154 0 215 261 70 78 chr2 200379670 200379785 -50308069 - MIR SINE MIR -121 141 28 493 253 48 30 chr2 200380118 200380284 -50307570 - MER5A DNA MER1_type -13 176 8 217 229 0 0 chr2 200380384 200380432 -50307422 - MIR SINE MIR -124 138 91 271 336 79 21 chr2 200381038 200381178 -50306676 - L2 LINE L2 -1 3271 3124 468 234 57 71 chr2 200381206 200381347 -50306507 + MER91A DNA MER1_type 58 196 0 464 269 69 7 chr2 200382637 200382782 -50305072 - MIR SINE MIR 0 262 109 560 302 121 28 chr2 200382845 200383516 -50304338 - L2 LINE L2 -4 3309 2572 2448 71 0 0 chr2 200384227 200384536 -50303318 - AluY SINE Alu -2 309 1 261 98 0 0 chr2 200384738 200384779 -50303075 + (TG)n Simple_repeat Simple_repeat 2 42 0 345 222 122 0 chr2 200384843 200384933 -50302921 - FLAM_A SINE Alu -4 129 29 2310 103 0 3 chr2 200385035 200385345 -50302509 - AluSc SINE Alu 0 309 1 287 321 15 51 chr2 200387078 200387215 -50300639 + L2 LINE L2 2964 3095 -177 261 29 0 0 chr2 200387255 200387289 -50300565 + L1MA9 LINE L1 6277 6310 -2 2102 94 18 0 chr2 200387449 200387747 -50300107 + AluSc SINE Alu 1 303 0 321 47 0 0 chr2 200389031 200389063 -50298791 + (CA)n Simple_repeat Simple_repeat 1 75 0 321 47 0 0 chr2 200389063 200389106 -50298748 + (CA)n Simple_repeat Simple_repeat 2 44 0 207 0 0 0 chr2 200390729 200390752 -50297102 + (TGGA)n Simple_repeat Simple_repeat 4 26 0 2262 30 4 0 chr2 200391386 200391655 -50296199 + L1PA5 LINE L1 5879 6148 -6 2483 52 3 0 chr2 200392576 200392867 -50294987 - AluY SINE Alu -19 292 1 191 233 0 23 chr2 200393283 200393326 -50294528 + MIR SINE MIR 89 130 -78 200 238 99 69 chr2 200394686 200394787 -50293067 + L2 LINE L2 3149 3252 -20 2108 134 0 19 chr2 200394875 200395189 -50292665 + AluJb SINE Alu 1 308 -4 438 318 8 8 chr2 200395323 200395452 -50292402 + MIR SINE MIR 8 136 -126 1334 109 0 57 chr2 200395555 200395765 -50292089 + AluSg/x SINE Alu 112 309 -3 193 279 44 29 chr2 200398849 200398917 -50288937 - MIR SINE MIR -174 88 20 229 209 30 15 chr2 200401837 200401904 -50285950 + MER20 DNA MER1_type 133 200 -19 22 80 0 0 chr2 200401950 200402000 -50285854 + AT_rich Low_complexity Low_complexity 1 50 0 387 41 0 0 chr2 200402041 200402090 -50285764 + (CA)n Simple_repeat Simple_repeat 1 49 0 335 333 11 0 chr2 200402620 200402710 -50285144 - MIR3 SINE MIR -41 167 77 1452 162 0 36 chr2 200403209 200403462 -50284392 - AluJo SINE Alu -68 244 1 445 246 7 70 chr2 200404590 200404732 -50283122 - L1ME3A LINE L1 -129 6041 5909 231 213 0 93 chr2 200405350 200405425 -50282429 + G-rich Low_complexity Low_complexity 1 68 0 116 103 0 0 chr2 200405425 200405590 -50282264 + GC_rich Low_complexity Low_complexity 1 165 0 44 93 0 0 chr2 200405623 200405677 -50282177 + GC_rich Low_complexity Low_complexity 1 54 0 194 74 0 0 chr2 200405685 200405695 -50282159 + (C)n Simple_repeat Simple_repeat 1 10 -17 180 0 0 0 chr2 200405695 200405715 -50282139 + (G)n Simple_repeat Simple_repeat 1 20 0 194 74 0 0 chr2 200405715 200405731 -50282123 + (C)n Simple_repeat Simple_repeat 9 27 0 427 289 114 83 chr2 200405743 200406374 -50281480 - L1M2 LINE L1 -5701 1148 526 251 152 61 30 chr2 200406858 200406924 -50280930 - MER4E LTR ERV1 -464 302 235 2471 87 3 0 chr2 200407892 200408204 -50279650 + AluSp SINE Alu 1 313 0 316 200 20 10 chr2 200408767 200408867 -50278987 + (TATATG)n Simple_repeat Simple_repeat 2 102 0 2099 155 30 6 chr2 200408888 200409223 -50278631 + MER2 DNA MER2_type 2 344 0 204 40 0 0 chr2 200410084 200410109 -50277745 + (A)n Simple_repeat Simple_repeat 1 25 0 267 188 188 12 chr2 200411042 200411122 -50276732 + MLT1L LTR MaLR 4 97 -518 228 326 0 32 chr2 200411158 200411253 -50276601 + MLT1L LTR MaLR 199 290 -325 375 250 158 33 chr2 200411297 200411481 -50276373 + MLT1J LTR MaLR 305 511 0 1113 89 0 57 chr2 200412483 200412641 -50275213 + AluSg SINE Alu 1 149 -161 1907 162 16 10 chr2 200413580 200413888 -50273966 + AluJo SINE Alu 1 310 -2 1830 171 0 3 chr2 200414200 200414493 -50273361 - AluJb SINE Alu -20 292 1 193 318 73 45 chr2 200414511 200414621 -50273233 + L2 LINE L2 3160 3272 0 313 234 362 0 chr2 200414776 200414917 -50272937 - MIR SINE MIR -70 192 1 234 368 144 26 chr2 200415036 200415836 -50272018 + L2 LINE L2 1816 2709 -605 310 239 9 9 chr2 200416509 200416618 -50271236 + (TA)n Simple_repeat Simple_repeat 1 109 0 656 227 77 63 chr2 200416619 200416905 -50270949 - L1MC4a LINE L1 -1840 5968 5679 3014 249 36 48 chr2 200417767 200418676 -50269178 + L1M4 LINE L1 12 909 -5633 326 262 12 0 chr2 200418943 200419027 -50268827 - L1ME3 LINE L1 -143 6019 5935 2629 59 0 0 chr2 200419082 200419388 -50268466 - AluY SINE Alu -5 306 1 654 281 122 9 chr2 200419399 200419620 -50268234 - L1ME3 LINE L1 -42 6120 5875 305 236 55 55 chr2 200419668 200419850 -50268004 - L1MC5 LINE L1 -519 7442 7261 233 314 10 20 chr2 200419833 200419935 -50267919 - L1MC4 LINE L1 -591 7451 7351 * 423 281 25 33 chr2 200419991 200420265 -50267589 - L1MC5 LINE L1 -759 7202 6931 236 263 191 26 chr2 200420358 200420510 -50267344 - L1MC4a LINE L1 -1682 6126 5950 362 342 8 0 chr2 200420563 200420680 -50267174 - MIR SINE MIR -142 120 3 2778 90 31 6 chr2 200421103 200421458 -50266396 + THE1B LTR MaLR 1 364 0 2279 92 7 3 chr2 200421891 200422183 -50265671 - AluSq SINE Alu -20 293 1 2087 113 0 23 chr2 200422184 200422485 -50265369 - AluSg SINE Alu -16 294 1 2312 97 10 3 chr2 200423645 200423953 -50263901 - AluSg SINE Alu 0 310 1 819 246 148 19 chr2 200424356 200424722 -50263132 - L1ME4a LINE L1 0 6121 5709 189 0 0 0 chr2 200424766 200424787 -50263067 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2346 16 0 0 chr2 200424789 200425045 -50262809 - AluYa5 SINE Alu -17 294 39 356 291 82 13 chr2 200425790 200425948 -50261906 - MIR SINE MIR -21 241 73 896 213 64 8 chr2 200427124 200427359 -50260495 - MER5C DNA MER1_type -76 248 1 196 292 0 31 chr2 200427651 200427716 -50260138 + MER5A DNA MER1_type 13 75 -114 18305 133 19 5 chr2 200427717 200429451 -50258403 + L1M1 LINE L1 16 1802 -5763 360 0 0 0 chr2 200429451 200429491 -50258363 + (GA)n Simple_repeat Simple_repeat 1 40 0 18305 133 19 5 chr2 200429491 200430495 -50257359 + L1M1 LINE L1 1802 2791 -4774 2325 107 79 0 chr2 200430488 200430843 -50257011 + L1MA3 LINE L1 5409 5791 -514 * 251 118 0 53 chr2 200430849 200430925 -50256929 + (TA)n Simple_repeat Simple_repeat 2 73 0 3892 99 4 0 chr2 200430925 200430937 -50256917 + L1MA3 LINE L1 5781 5791 -514 324 48 0 0 chr2 200430937 200430979 -50256875 + (CA)n Simple_repeat Simple_repeat 1 42 0 3892 99 4 0 chr2 200430979 200431489 -50256365 + L1MA3 LINE L1 5791 6305 0 367 328 8 8 chr2 200431492 200431620 -50256234 + MER5A DNA MER1_type 61 188 -1 279 197 114 83 chr2 200432623 200432755 -50255099 + MIR SINE MIR 50 185 -77 359 293 130 54 chr2 200432834 200433073 -50254781 + MIR SINE MIR 5 261 -1 455 282 53 43 chr2 200434005 200434193 -50253661 + L2 LINE L2 3093 3282 -31 1540 174 49 26 chr2 200434981 200435285 -50252569 - AluJo SINE Alu -1 311 1 332 279 30 42 chr2 200435459 200435624 -50252230 + MIR SINE MIR 100 262 0 567 0 0 0 chr2 200436451 200436514 -50251340 + (TG)n Simple_repeat Simple_repeat 2 64 0 352 227 62 11 chr2 200437829 200437934 -50249920 + MER20B DNA MER1_type 89 202 -17 3926 127 10 2 chr2 200438126 200438709 -50249145 - L1PA13 LINE L1 -4 6159 5572 1723 145 14 27 chr2 200438718 200439014 -50248840 - AluJo SINE Alu -20 292 1 2162 114 0 0 chr2 200439356 200439667 -50248187 - AluSc SINE Alu 0 311 1 22 80 0 0 chr2 200440074 200440124 -50247730 + AT_rich Low_complexity Low_complexity 1 50 0 2363 93 0 31 chr2 200440219 200440541 -50247313 - AluSx SINE Alu 0 312 1 21 36 0 0 chr2 200440576 200440604 -50247250 + AT_rich Low_complexity Low_complexity 1 28 0 2263 99 20 0 chr2 200441459 200441753 -50246101 - AluSx SINE Alu -12 300 1 5232 81 16 1 chr2 200441814 200442483 -50245371 - L1PA13 LINE L1 -1 6162 5484 558 239 37 30 chr2 200443480 200443614 -50244240 - MIR SINE MIR -55 153 19 380 300 144 11 chr2 200443682 200443862 -50243992 - MIR SINE MIR -12 250 47 587 221 0 0 chr2 200444835 200444939 -50242915 - U13 snRNA snRNA 0 104 1 295 298 158 0 chr2 200447044 200447158 -50240696 - L2 LINE L2 -2 3270 3139 1078 130 13 0 chr2 200448150 200448304 -50239550 + AluSx SINE Alu 3 158 -154 304 305 57 9 chr2 200449455 200449560 -50238294 - MIR3 SINE MIR -52 156 47 2129 139 0 3 chr2 200451165 200451474 -50236380 - AluJb SINE Alu -4 308 1 27 62 0 0 chr2 200452353 200452401 -50235453 + AT_rich Low_complexity Low_complexity 1 48 0 181 0 0 65 chr2 200452413 200452444 -50235410 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 221 349 164 27 chr2 200452689 200452835 -50235019 - L2 LINE L2 -5 3267 3102 730 302 137 67 chr2 200453086 200453561 -50234293 - L2 LINE L2 -353 2961 2521 372 244 68 107 chr2 200453561 200453766 -50234088 + MER117 DNA MER1_type 1 197 0 730 302 137 67 chr2 200453766 200454449 -50233405 - L2 LINE L2 -793 2521 1722 331 151 11 43 chr2 200455207 200455392 -50232462 + (CACCC)n Simple_repeat Simple_repeat 2 180 0 297 305 61 0 chr2 200455830 200455961 -50231893 - L3 LINE CR1 -198 1379 1241 464 318 93 13 chr2 200456184 200456420 -50231434 - L3 LINE CR1 -491 1086 832 1764 164 10 3 chr2 200456422 200456720 -50231134 + AluSq SINE Alu 1 300 -13 1857 148 31 3 chr2 200458303 200458594 -50229260 + AluSx SINE Alu 1 299 -13 1749 163 0 4 chr2 200458845 200459103 -50228751 + AluJo SINE Alu 12 268 -44 2079 147 62 50 chr2 200459536 200459959 -50227895 + MSTA LTR MaLR 1 428 0 191 277 75 32 chr2 200462653 200462747 -50225107 - L2 LINE L2 -1813 1501 1404 2301 184 70 41 chr2 200463273 200463919 -50223935 - L1MC3 LINE L1 -231 7764 7079 3053 84 7 5 chr2 200463919 200464346 -50223508 - L1PB1 LINE L1 -4 6147 5720 2301 184 70 41 chr2 200464346 200464662 -50223192 - L1MC3 LINE L1 -916 7079 6774 1210 121 0 17 chr2 200464786 200464983 -50222871 + AluSg/x SINE Alu 125 312 0 261 57 0 0 chr2 200465154 200465189 -50222665 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 202 353 35 24 chr2 200466102 200466187 -50221667 + MIR SINE MIR 20 105 -157 2394 97 0 10 chr2 200469401 200469711 -50218143 - AluSx SINE Alu -5 307 1 23 0 0 0 chr2 200469861 200469884 -50217970 + AT_rich Low_complexity Low_complexity 1 23 0 2298 97 3 0 chr2 200469887 200470185 -50217669 - AluSp SINE Alu -14 299 1 2236 97 7 0 chr2 200470297 200470597 -50217257 - AluSp SINE Alu -11 302 1 428 234 98 34 chr2 200471048 200471253 -50216601 + Charlie8 DNA MER1_type 42 259 -2158 448 311 89 43 chr2 200471438 200471808 -50216046 - L2 LINE L2 -357 2957 2571 240 298 106 50 chr2 200471983 200472124 -50215730 - MIR SINE MIR -77 185 37 800 167 0 106 chr2 200472549 200472747 -50215107 + MER5B DNA MER1_type 1 177 -1 226 175 0 0 chr2 200473236 200473276 -50214578 + MLT1A1 LTR MaLR 325 364 -1 1527 211 24 76 chr2 200473494 200474045 -50213809 + L1MB7 LINE L1 16 537 -6005 3183 193 28 24 chr2 200474051 200474206 -50213648 + L1MA9 LINE L1 4137 4290 -1856 693 234 0 0 chr2 200474206 200474330 -50213524 + FLAM_A SINE Alu 1 124 -9 3183 193 28 24 chr2 200474330 200474452 -50213402 + L1MA9 LINE L1 4290 4410 -1736 2205 128 3 0 chr2 200474452 200474758 -50213096 + AluSx SINE Alu 1 307 -5 3183 193 28 24 chr2 200474758 200475279 -50212575 + L1MA9 LINE L1 4410 4939 -1207 833 154 0 23 chr2 200475279 200475409 -50212445 + FRAM SINE Alu 45 171 -5 2513 160 31 0 chr2 200475409 200475864 -50211990 + L1MA9 LINE L1 5325 5793 -519 1948 141 6 44 chr2 200475876 200475933 -50211921 + MER7A DNA MER2_type 1 59 -2979 2393 146 50 29 chr2 200475933 200476350 -50211504 - MSTB LTR MaLR 0 426 1 1948 141 6 44 chr2 200476350 200476654 -50211200 + MER7A DNA MER2_type 59 346 0 2497 172 37 2 chr2 200476657 200477169 -50210685 + L1MA9 LINE L1 5783 6312 0 1673 190 15 45 chr2 200477184 200477652 -50210202 + Looper DNA T2_type 1012 1465 -93 24 67 0 0 chr2 200477655 200477700 -50210154 + AT_rich Low_complexity Low_complexity 1 45 0 4279 235 60 34 chr2 200477783 200479888 -50207966 + L1MB7 LINE L1 541 2802 -3842 1982 163 7 56 chr2 200479888 200480298 -50207556 + MLT1B LTR MaLR 1 390 0 4279 235 60 34 chr2 200480298 200480502 -50207352 + L1MB7 LINE L1 2802 2999 -3645 3668 185 62 19 chr2 200480603 200481482 -50206372 + L1MB7 LINE L1 5681 6605 -77 2103 149 3 0 chr2 200481482 200481790 -50206064 + AluSx SINE Alu 1 309 -3 3668 185 62 19 chr2 200481790 200481871 -50205983 + L1MB7 LINE L1 6605 6681 -1 2240 98 0 0 chr2 200482014 200482325 -50205529 + AluY SINE Alu 1 311 0 386 221 19 95 chr2 200483022 200483180 -50204674 + Charlie8 DNA MER1_type 112 257 -2160 631 168 136 16 chr2 200483634 200483795 -50204059 - MER5A DNA MER1_type -3 186 4 1658 120 11 0 chr2 200484408 200484675 -50203179 - L1MB2 LINE L1 -258 5913 5644 1955 142 30 0 chr2 200484735 200485031 -50202823 - AluSq SINE Alu -8 305 1 646 260 60 60 chr2 200485511 200485743 -50202111 - MER102b DNA MER1_type -1096 332 98 2162 54 0 11 chr2 200485743 200486020 -50201834 - L1PA6 LINE L1 -2 6152 5879 646 260 60 60 chr2 200486020 200486087 -50201767 - MER102b DNA MER1_type -1329 99 33 231 345 12 0 chr2 200486215 200486299 -50201555 - MIR3 SINE MIR -26 182 98 976 193 6 0 chr2 200486409 200486575 -50201279 - FAM SINE Alu -7 168 2 308 213 41 41 chr2 200486642 200486728 -50201126 - MIR SINE MIR -63 145 67 339 44 0 0 chr2 200487071 200487116 -50200738 + (TTTAG)n Simple_repeat Simple_repeat 1 45 0 1743 165 3 18 chr2 200487116 200487401 -50200453 - AluJo SINE Alu -31 281 1 1577 147 27 14 chr2 200487403 200487695 -50200159 - Tigger5 DNA MER2_type -184 2139 1844 1028 216 14 10 chr2 200487701 200487909 -50199945 - Tigger5 DNA MER2_type -2102 221 13 369 145 14 14 chr2 200487909 200487978 -50199876 - Tigger5 DNA MER2_type 0 2323 2255 25 31 0 0 chr2 200488427 200488459 -50199395 + AT_rich Low_complexity Low_complexity 1 32 0 423 287 81 23 chr2 200489356 200489530 -50198324 - MLT1J LTR MaLR -325 186 3 510 235 43 37 chr2 200489531 200489645 -50198209 + MIR SINE MIR 98 215 -47 1718 115 0 76 chr2 200489645 200489933 -50197921 + AluSq SINE Alu 43 308 -5 510 235 43 37 chr2 200489933 200489980 -50197874 + MIR SINE MIR 215 260 -2 22 35 0 0 chr2 200491586 200491615 -50196239 + AT_rich Low_complexity Low_complexity 1 29 0 346 299 109 0 chr2 200491880 200492017 -50195837 - L1MC4 LINE L1 -89 7953 7802 1451 247 105 24 chr2 200492132 200492856 -50194998 - L1MC4 LINE L1 -367 7675 6893 2211 119 0 10 chr2 200492862 200493172 -50194682 - AluSx SINE Alu -5 307 1 1718 159 36 0 chr2 200493417 200493694 -50194160 - AluJb SINE Alu -25 287 1 726 355 70 21 chr2 200494248 200494634 -50193220 - L3 LINE CR1 -978 599 195 4100 149 31 46 chr2 200494738 200495731 -50192123 - MER11C LTR ERVK -4 1067 1 2226 83 0 4 chr2 200496008 200496284 -50191570 + AluSq SINE Alu 1 275 -38 510 240 200 0 chr2 200496292 200496442 -50191412 + MER5A DNA MER1_type 10 189 0 596 297 54 13 chr2 200497280 200497519 -50190335 + MIR SINE MIR 2 250 -12 317 242 0 124 chr2 200498367 200498520 -50189334 + MIR SINE MIR 129 262 0 302 251 242 3 chr2 200498536 200498883 -50188971 - L1ME4a LINE L1 -1 6120 5691 318 274 94 0 chr2 200498902 200499008 -50188846 - L1ME4a LINE L1 -483 5638 5523 2276 101 3 0 chr2 200499045 200499341 -50188513 - AluSq SINE Alu -16 297 1 376 327 83 19 chr2 200499530 200499735 -50188119 - L1ME4a LINE L1 -884 5262 5045 2415 126 56 2 chr2 200499879 200500308 -50187546 + L1MA9 LINE L1 5861 6312 0 363 266 23 115 chr2 200500529 200500747 -50187107 - L2 LINE L2 -423 2891 2694 1728 161 25 36 chr2 200500943 200501304 -50186550 + MLT1A1 LTR MaLR 1 357 -8 2354 28 43 0 chr2 200502115 200502397 -50185457 - AluY SINE Alu -17 294 1 455 214 182 13 chr2 200502919 200503078 -50184776 + L2 LINE L2 3128 3313 0 398 266 53 30 chr2 200503959 200504128 -50183726 - L2 LINE L2 -1900 1414 1242 299 314 97 16 chr2 200505662 200505920 -50181934 + L1ME4a LINE L1 5770 6048 -73 233 244 67 11 chr2 200506955 200507045 -50180809 + L1ME3A LINE L1 5845 5939 -231 263 337 53 12 chr2 200507148 200507317 -50180537 + L1ME3A LINE L1 5988 6163 -7 1992 135 2 69 chr2 200507395 200507802 -50180052 + MLT1B LTR MaLR 7 386 -4 2181 123 7 7 chr2 200508096 200508406 -50179448 - AluSx SINE Alu -2 310 1 282 240 133 0 chr2 200508665 200508740 -50179114 + MLT1J LTR MaLR 233 317 -194 230 204 143 0 chr2 200510047 200510096 -50177758 - L2 LINE L2 -4 3268 3213 2338 100 0 3 chr2 200512542 200512851 -50175003 + AluSg SINE Alu 1 308 -2 26 0 0 0 chr2 200513150 200513176 -50174678 + AT_rich Low_complexity Low_complexity 1 26 0 308 220 85 17 chr2 200513271 200513389 -50174465 - L1ME4a LINE L1 -4 6117 5992 294 149 41 8 chr2 200513461 200513582 -50174272 + (TA)n Simple_repeat Simple_repeat 1 125 0 180 182 0 0 chr2 200513661 200513705 -50174149 + (TA)n Simple_repeat Simple_repeat 2 45 0 249 268 0 0 chr2 200513956 200514027 -50173827 - L1ME4a LINE L1 -245 5876 5806 2410 85 0 7 chr2 200514165 200514471 -50173383 - AluSg SINE Alu -5 305 2 202 177 16 48 chr2 200515135 200515197 -50172657 + (TTATA)n Simple_repeat Simple_repeat 1 60 0 1724 161 32 26 chr2 200515717 200516027 -50171827 + AluJo SINE Alu 1 312 0 25 31 0 0 chr2 200516209 200516241 -50171613 + AT_rich Low_complexity Low_complexity 1 32 0 2296 96 0 10 chr2 200516790 200517103 -50170751 - AluY SINE Alu -1 310 1 285 271 80 10 chr2 200517211 200517333 -50170521 - MIR SINE MIR -61 147 14 315 264 9 38 chr2 200518097 200518203 -50169651 + MER5A DNA MER1_type 87 189 0 3213 100 126 0 chr2 200518383 200518875 -50168979 - MER41C LTR ERV1 0 554 1 203 317 83 33 chr2 200523119 200523239 -50164615 - L3 LINE CR1 -11 1566 1441 253 362 50 14 chr2 200523628 200523769 -50164085 + L3 LINE CR1 366 511 -1066 22 35 0 0 chr2 200523769 200523798 -50164056 + AT_rich Low_complexity Low_complexity 1 29 0 4604 57 0 3 chr2 200523815 200524392 -50163462 - L1PA7 LINE L1 -4 6150 5576 460 372 29 61 chr2 200524412 200524756 -50163098 - L2 LINE L2 -30 3242 2910 2099 127 0 19 chr2 200524771 200525078 -50162776 - AluSg SINE Alu -9 301 1 368 239 22 65 chr2 200525105 200525283 -50162571 - MLT1J LTR MaLR 0 461 279 206 287 224 14 chr2 200525411 200525554 -50162300 - L2 LINE L2 -203 3069 2897 249 224 0 0 chr2 200525614 200525672 -50162182 - MLT1J LTR MaLR -45 466 409 357 305 117 30 chr2 200525835 200526032 -50161822 - L2 LINE L2 -517 2797 2584 524 225 102 81 chr2 200526195 200526480 -50161374 - MER102a DNA MER1_type -3 327 37 318 261 78 70 chr2 200526908 200527050 -50160804 - MIR SINE MIR -64 198 56 23 78 0 0 chr2 200527060 200527111 -50160743 + AT_rich Low_complexity Low_complexity 1 51 0 40584 34 24 1 chr2 200528953 200535000 -50152854 + L1PA2 LINE L1 5 6186 0 297 75 0 0 chr2 200535128 200535168 -50152686 + (T)n Simple_repeat Simple_repeat 1 40 0 393 276 47 53 chr2 200535228 200535398 -50152456 + MIR SINE MIR 31 199 -63 906 193 94 4 chr2 200536173 200536406 -50151448 - L1MD3 LINE L1 -13 7982 7729 207 0 0 0 chr2 200537058 200537081 -50150773 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 424 325 18 12 chr2 200537207 200537370 -50150484 + MIR SINE MIR 50 213 -49 2424 92 3 0 chr2 200537772 200538077 -50149777 - AluSx SINE Alu -6 306 1 21 0 0 0 chr2 200538223 200538244 -50149610 + AT_rich Low_complexity Low_complexity 1 21 0 810 241 105 3 chr2 200538681 200538975 -50148879 + MER113 DNA MER1_type? 44 367 -154 231 189 19 0 chr2 200539653 200539706 -50148148 + MER113 DNA MER1_type? 411 464 -57 428 196 217 35 chr2 200539805 200539948 -50147906 - MER5C DNA MER1_type -23 301 133 1860 138 0 44 chr2 200540288 200540609 -50147245 - AluSx SINE Alu 0 308 1 3906 183 97 22 chr2 200541001 200542550 -50145304 - MER52A LTR ERV1 0 1755 1 596 182 25 0 chr2 200542557 200542678 -50145176 - MER5C DNA MER1_type -200 124 1 1735 136 8 4 chr2 200542927 200543185 -50144669 - AluJb SINE Alu -19 293 35 2220 111 0 7 chr2 200543456 200543754 -50144100 + AluSx SINE Alu 1 296 -16 1502 199 45 14 chr2 200543763 200544050 -50143804 + AluJo SINE Alu 1 296 -16 252 264 65 93 chr2 200544171 200544417 -50143437 + MER102b DNA MER1_type 103 341 0 331 328 101 25 chr2 200544789 200544987 -50142867 + L2 LINE L2 3100 3312 -1 1332 171 0 0 chr2 200545269 200545480 -50142374 + AluSg/x SINE Alu 88 298 -14 2763 147 47 19 chr2 200545899 200546703 -50141151 + MER21B-int LTR ERV1 3249 4134 -57 2213 199 11 81 chr2 200546791 200547320 -50140534 + MER21B LTR ERV1 1 492 -371 1428 77 0 0 chr2 200547408 200547578 -50140276 - AluY SINE Alu -58 253 84 1215 165 23 18 chr2 200548845 200549063 -50138791 - MER20 DNA MER1_type 0 219 1 207 333 6 38 chr2 200549196 200549355 -50138499 + (TATATG)n Simple_repeat Simple_repeat 3 156 0 186 243 0 0 chr2 200549578 200549615 -50138239 + MER5C DNA MER1_type 1 37 -287 350 196 143 54 chr2 200549700 200549868 -50137986 - MER113 DNA MER1_type? -330 191 9 391 204 38 102 chr2 200549957 200550114 -50137740 + MER6 DNA MER2_type -2 865 0 537 300 121 0 chr2 200550416 200550656 -50137198 + L2 LINE L2 3045 3313 0 369 303 121 46 chr2 200550657 200550878 -50136976 - L1M4 LINE L1 -2734 3412 3164 2239 128 0 3 chr2 200550878 200551191 -50136663 - AluSx SINE Alu 0 312 1 369 303 121 46 chr2 200551191 200551250 -50136604 - L1M4 LINE L1 -2982 3164 3111 339 300 33 27 chr2 200551506 200551656 -50136198 + MIR SINE MIR 78 228 -34 2368 90 3 0 chr2 200552133 200552433 -50135421 - AluSq SINE Alu -11 302 2 924 305 118 8 chr2 200553028 200553418 -50134436 + MER115 DNA AcHobo 1 433 -260 563 186 211 6 chr2 200553448 200553604 -50134250 + MER115 DNA AcHobo 506 693 0 1239 181 138 11 chr2 200554897 200555157 -50132697 + AluSx SINE Alu 1 293 -9 303 71 0 0 chr2 200556046 200556088 -50131766 + (TATG)n Simple_repeat Simple_repeat 1 42 0 21 57 0 0 chr2 200556980 200557015 -50130839 + AT_rich Low_complexity Low_complexity 1 35 0 319 227 62 11 chr2 200557500 200557605 -50130249 + MER20B DNA MER1_type 89 202 -17 3629 127 10 2 chr2 200557797 200558380 -50129474 - L1PA13 LINE L1 -4 6159 5572 1794 150 14 20 chr2 200558389 200558683 -50129171 - AluJo SINE Alu -20 292 1 2163 114 0 0 chr2 200559025 200559336 -50128518 - AluSc SINE Alu 0 311 1 22 80 0 0 chr2 200559743 200559793 -50128061 + AT_rich Low_complexity Low_complexity 1 50 0 2213 87 9 40 chr2 200559888 200560211 -50127643 - AluSq SINE Alu 0 313 1 430 284 129 21 chr2 200560235 200560429 -50127425 - MIR SINE MIR -16 246 33 1566 136 56 75 chr2 200560529 200560904 -50126950 - THE1C LTR MaLR 0 375 8 456 278 0 8 chr2 200561359 200561485 -50126369 + L2 LINE L2 2646 2770 -544 182 216 78 0 chr2 200561498 200561549 -50126305 + MIR SINE MIR 1 55 -207 1679 87 20 124 chr2 200561561 200561908 -50125946 - Tigger7 DNA MER2_type 0 2487 2177 1307 232 14 4 chr2 200561902 200562182 -50125672 - Tigger7 DNA MER2_type -450 283 1 * 543 271 21 21 chr2 200562182 200562370 -50125484 + MIR SINE MIR 75 262 0 1197 264 112 43 chr2 200562382 200562847 -50125007 + L2 LINE L2 2813 3309 -4 2940 221 123 24 chr2 200564078 200564943 -50122911 - LTR28 LTR ERV1 -70 950 1 1370 279 45 47 chr2 200564946 200565543 -50122311 - L2 LINE L2 -2 3311 2718 21 57 0 0 chr2 200567302 200567337 -50120517 + AT_rich Low_complexity Low_complexity 1 35 0 223 175 0 0 chr2 200567836 200567876 -50119978 + L2 LINE L2 3274 3313 0 367 310 8 47 chr2 200567983 200568112 -50119742 + MER5A DNA MER1_type 7 130 -59 2151 121 0 3 chr2 200568117 200568414 -50119440 - AluSx SINE Alu -10 302 7 21 0 0 0 chr2 200568847 200568868 -50118986 + AT_rich Low_complexity Low_complexity 1 21 0 342 143 0 0 chr2 200568895 200568944 -50118910 + Alu SINE Alu 4 52 -250 189 0 0 0 chr2 200568960 200568981 -50118873 + (CA)n Simple_repeat Simple_repeat 1 21 0 1685 182 10 27 chr2 200569843 200570139 -50117715 - AluJo SINE Alu -19 293 3 1205 153 0 79 chr2 200570990 200571206 -50116648 + AluSx SINE Alu 1 199 -113 524 73 73 57 chr2 200571206 200571329 -50116525 + AluSg/x SINE Alu 67 191 -121 1394 191 61 155 chr2 200571697 200572463 -50115391 - LTR8A LTR ERV1 0 727 34 322 298 37 29 chr2 200572480 200572722 -50115132 + L1ME4a LINE L1 5663 5906 -215 3608 135 68 5 chr2 200572793 200573407 -50114447 - MER39B LTR ERV1 0 653 1 406 309 55 70 chr2 200573837 200574038 -50113816 + L2 LINE L2 3075 3272 0 236 167 0 19 chr2 200574467 200574521 -50113333 + (TA)n Simple_repeat Simple_repeat 2 54 0 231 125 0 0 chr2 200574679 200574719 -50113135 + (CA)n Simple_repeat Simple_repeat 1 40 0 223 253 58 46 chr2 200574897 200574984 -50112870 + L2 LINE L2 2698 2785 -529 356 272 203 6 chr2 200575112 200575270 -50112584 - MIR SINE MIR -34 228 40 235 288 24 80 chr2 200575277 200575402 -50112452 + L2 LINE L2 2932 3049 -223 2271 99 3 0 chr2 200575559 200575851 -50112003 + AluSg SINE Alu 5 297 -13 190 389 128 27 chr2 200576682 200577011 -50110843 + L2 LINE L2 2804 3165 -107 1574 186 11 14 chr2 200577554 200577834 -50110020 - AluJo SINE Alu -33 279 1 411 260 17 0 chr2 200579314 200579491 -50108363 + (TA)n Simple_repeat Simple_repeat 1 180 0 342 0 0 0 chr2 200579513 200579551 -50108303 + (TG)n Simple_repeat Simple_repeat 2 39 0 783 116 0 65 chr2 200579563 200579701 -50108153 - AluJb SINE Alu -180 132 4 2749 209 15 21 chr2 200579791 200580447 -50107407 - L1MB7 LINE L1 -11 6173 5522 286 267 9 38 chr2 200582006 200582111 -50105743 - MIR SINE MIR -10 252 151 379 262 109 92 chr2 200582118 200582264 -50105590 - L1ME4a LINE L1 -15 6106 5964 234 0 0 0 chr2 200582264 200582290 -50105564 + (TG)n Simple_repeat Simple_repeat 2 27 0 379 262 109 92 chr2 200582290 200582437 -50105417 - L1ME4a LINE L1 -157 5964 5808 911 187 6 0 chr2 200583588 200583754 -50104100 - AluJb SINE Alu -12 300 134 1577 146 0 55 chr2 200583754 200584029 -50103825 - AluJo SINE Alu -13 299 40 240 204 0 0 chr2 200584997 200585041 -50102813 - Alu SINE Alu -121 181 138 1155 163 154 31 chr2 200585261 200585586 -50102268 + MLT1A1 LTR MaLR 1 365 0 469 302 68 32 chr2 200586676 200586928 -50100926 - MIR SINE MIR 0 262 2 880 206 58 22 chr2 200587056 200587332 -50100522 - L1MC5 LINE L1 -408 7553 7268 248 356 40 77 chr2 200587432 200587679 -50100175 + L2 LINE L2 3035 3272 0 180 0 0 0 chr2 200587805 200587825 -50100029 + (T)n Simple_repeat Simple_repeat 1 20 0 3094 273 65 10 chr2 200588043 200588931 -50098923 + MER45C DNA AcHobo 17 953 0 368 285 72 26 chr2 200590350 200590543 -50097311 - MLT1K LTR MaLR -328 260 59 181 333 43 21 chr2 200592607 200592700 -50095154 + L2 LINE L2 2959 3053 -219 2356 104 0 16 chr2 200592831 200593148 -50094706 - AluSx SINE Alu 0 312 1 844 170 7 7 chr2 200593794 200593929 -50093925 - FRAM SINE Alu -49 127 1 903 161 0 0 chr2 200593946 200594089 -50093765 - FLAM_C SINE Alu 0 143 1 665 232 94 58 chr2 200594343 200594459 -50093395 - MIR SINE MIR -2 260 150 2137 131 3 0 chr2 200594459 200594756 -50093098 - AluSx SINE Alu -14 298 1 665 232 94 58 chr2 200594756 200594863 -50092991 - MIR SINE MIR -112 150 29 1003 308 25 54 chr2 200595063 200595469 -50092385 + MLT1K LTR MaLR 117 510 -78 181 291 0 17 chr2 200595470 200595587 -50092267 + CT-rich Low_complexity Low_complexity 1 115 0 23 0 0 0 chr2 200597536 200597559 -50090295 + AT_rich Low_complexity Low_complexity 1 23 0 2223 125 3 0 chr2 200597997 200598309 -50089545 + AluSq SINE Alu 1 313 0 305 70 88 0 chr2 200598414 200598471 -50089383 - Alu SINE Alu 0 302 241 1979 106 36 26 chr2 200598627 200598929 -50088925 - AluSx SINE Alu -7 305 1 4855 126 6 1 chr2 200599141 200599918 -50087936 - L1PA15 LINE L1 0 6165 5385 345 248 23 31 chr2 200600035 200600164 -50087690 - L1ME LINE L1 -614 5550 5423 383 187 13 13 chr2 200600825 200600900 -50086954 - Alu SINE Alu -8 293 219 28 29 0 0 chr2 200601573 200601608 -50086246 + AT_rich Low_complexity Low_complexity 1 35 0 420 20 0 0 chr2 200601980 200602029 -50085825 + (CA)n Simple_repeat Simple_repeat 2 50 0 540 230 10 0 chr2 200602502 200602602 -50085252 + MER5A DNA MER1_type 9 109 -80 203 287 42 98 chr2 200602527 200602670 -50085184 - MER5A DNA MER1_type -23 166 32 * 2003 117 67 0 chr2 200602836 200603118 -50084736 + AluSx SINE Alu 1 301 -11 232 255 0 0 chr2 200603724 200603771 -50084083 + polypyrimidine Low_complexity Low_complexity 3 49 0 2151 91 21 7 chr2 200606084 200606370 -50081484 - AluSg SINE Alu -20 290 1 309 151 0 0 chr2 200607671 200607724 -50080130 + T-rich Low_complexity Low_complexity 1 53 0 195 250 0 0 chr2 200609042 200609094 -50078760 + (TA)n Simple_repeat Simple_repeat 2 53 0 1070 178 84 53 chr2 200609126 200609201 -50078653 - L1ME LINE L1 -407 5757 5686 1962 122 25 76 chr2 200609201 200609596 -50078258 + THE1C LTR MaLR 1 375 0 1070 178 84 53 chr2 200609596 200609840 -50078014 - L1ME LINE L1 -478 5686 5428 207 204 0 0 chr2 200609921 200609975 -50077879 + CT-rich Low_complexity Low_complexity 4 57 0 1804 160 3 49 chr2 200610205 200610530 -50077324 + AluJb SINE Alu 1 310 -2 4024 174 3 11 chr2 200610966 200611694 -50076160 - MER72 LTR ERV1 0 722 1 323 356 24 57 chr2 200611887 200612185 -50075669 + L2 LINE L2 3008 3295 -18 2277 103 0 0 chr2 200612244 200612544 -50075310 - AluSc SINE Alu -9 300 1 282 73 0 0 chr2 200612660 200612701 -50075153 + (TG)n Simple_repeat Simple_repeat 1 41 0 2016 149 0 3 chr2 200612853 200613142 -50074712 - AluJo SINE Alu -24 288 1 416 263 32 51 chr2 200613387 200613543 -50074311 - MIR3 SINE MIR 0 208 56 321 350 76 13 chr2 200613730 200613887 -50073967 + MIR3 SINE MIR 30 196 -12 192 292 28 14 chr2 200614751 200614823 -50073031 + MIR SINE MIR 190 262 0 22 56 0 0 chr2 200615244 200615280 -50072574 + AT_rich Low_complexity Low_complexity 1 36 0 333 358 0 16 chr2 200615610 200615733 -50072121 + L1ME4a LINE L1 4058 4178 -1968 2300 105 0 0 chr2 200615798 200616092 -50071762 + AluSc SINE Alu 1 294 -15 687 246 149 35 chr2 200616195 200616423 -50071431 - MIR SINE MIR -1 261 8 541 265 116 54 chr2 200616436 200616859 -50070995 + L1ME4a LINE L1 5482 5930 -191 655 112 0 2 chr2 200616917 200617126 -50070728 + AluSx SINE Alu 48 304 0 1072 167 91 49 chr2 200618737 200619024 -50068830 - MER33 DNA MER1_type -25 299 1 2077 139 3 0 chr2 200619210 200619512 -50068342 - AluSx SINE Alu -9 303 1 2401 79 10 0 chr2 200619671 200619974 -50067880 - AluSc SINE Alu -3 306 1 26 0 0 0 chr2 200620054 200620080 -50067774 + AT_rich Low_complexity Low_complexity 1 26 0 262 244 8 126 chr2 200620281 200620347 -50067507 - MER5A DNA MER1_type 0 189 142 2100 107 41 3 chr2 200620347 200620638 -50067216 + AluSq SINE Alu 1 302 -11 262 244 8 126 chr2 200620638 200620690 -50067164 - MER5A DNA MER1_type -47 142 85 2070 121 0 10 chr2 200623054 200623352 -50064502 - AluSg SINE Alu -15 295 1 233 301 117 0 chr2 200624175 200624278 -50063576 + L2 LINE L2 3194 3308 -5 1341 242 100 9 chr2 200624664 200625262 -50062592 - L2 LINE L2 -101 3212 2563 513 69 0 0 chr2 200625639 200625711 -50062143 + L1PA15 LINE L1 6090 6161 -4 218 175 0 143 chr2 200626353 200626416 -50061438 + L2 LINE L2 3008 3061 -252 1960 139 0 17 chr2 200627076 200627378 -50060476 - AluJb SINE Alu -13 299 3 362 215 0 21 chr2 200628122 200628215 -50059639 + LTR67 LTR ERVL 457 547 -10 812 230 86 19 chr2 200628409 200628722 -50059132 - L1ME4a LINE L1 -193 5928 5595 21 0 0 0 chr2 200629675 200629696 -50058158 + AT_rich Low_complexity Low_complexity 1 21 0 244 48 48 0 chr2 200629730 200629772 -50058082 + (TG)n Simple_repeat Simple_repeat 2 45 0 252 310 23 11 chr2 200631971 200632058 -50055796 - MIR SINE MIR -74 188 101 971 176 81 11 chr2 200632605 200632878 -50054976 + MER33 DNA MER1_type 33 324 0 2259 115 0 0 chr2 200633503 200633798 -50054056 - AluSx SINE Alu -17 295 1 201 336 143 25 chr2 200633905 200634024 -50053830 + L2 LINE L2 2934 3066 -206 223 171 24 0 chr2 200634045 200634086 -50053768 + MIR SINE MIR 119 160 -102 200 194 0 0 chr2 200634342 200634378 -50053476 + A-rich Low_complexity Low_complexity 4 39 0 190 264 135 54 chr2 200634522 200634670 -50053184 + L2 LINE L2 3152 3311 -2 2415 73 0 3 chr2 200634705 200635008 -50052846 - AluY SINE Alu -9 302 1 681 287 43 20 chr2 200635227 200635481 -50052373 - MIR SINE MIR -2 260 1 1009 241 54 34 chr2 200636884 200637178 -50050676 - L2 LINE L2 -6 3307 3008 848 186 129 0 chr2 200638930 200639124 -50048730 + MER20 DNA MER1_type 1 219 0 1066 283 38 51 chr2 200640041 200640836 -50047018 - L1ME LINE L1 -4832 1281 613 247 376 66 12 chr2 200641199 200641608 -50046246 - L1ME LINE L1 -5929 467 37 361 276 119 53 chr2 200641924 200642167 -50045687 + MLT1L LTR MaLR 183 441 -174 21 0 0 0 chr2 200643799 200643820 -50044034 + AT_rich Low_complexity Low_complexity 1 21 0 192 214 95 0 chr2 200643873 200643915 -50043939 + MER5C DNA MER1_type 31 76 -248 350 154 92 0 chr2 200644031 200644096 -50043758 - MER5C DNA MER1_type -248 76 6 227 367 125 8 chr2 200644283 200644411 -50043443 - MIR3 SINE MIR -35 173 31 1637 96 4 8 chr2 200644544 200644805 -50043049 + L1MA7 LINE L1 5321 5580 -711 14377 124 23 16 chr2 200644805 200647198 -50040656 - Tigger1 DNA MER2_type 0 2418 10 1634 113 58 14 chr2 200647203 200647411 -50040443 + L1MA7 LINE L1 5579 5805 -486 279 0 0 0 chr2 200647411 200647442 -50040412 + (CA)n Simple_repeat Simple_repeat 2 32 0 1634 113 58 14 chr2 200647442 200647526 -50040328 + L1MA7 LINE L1 5805 5884 -407 450 276 123 15 chr2 200647710 200647913 -50039941 + MIR SINE MIR 13 237 -25 25 75 0 0 chr2 200647914 200647967 -50039887 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr2 200648364 200648385 -50039469 + AT_rich Low_complexity Low_complexity 1 21 0 495 235 29 7 chr2 200648461 200648597 -50039257 - MLT1I LTR MaLR -20 389 251 283 303 23 51 chr2 200648658 200648833 -50039021 - MLT1I LTR MaLR -172 237 68 284 235 69 0 chr2 200649668 200649770 -50038084 - L1M4 LINE L1 -3771 2375 2267 212 298 234 0 chr2 200651287 200651381 -50036473 + MIR SINE MIR 90 205 -57 209 220 0 40 chr2 200651427 200651477 -50036377 - L2 LINE L2 -11 3261 3214 2446 58 3 0 chr2 200652699 200652994 -50034860 + AluY SINE Alu 1 296 -15 705 128 0 0 chr2 200653566 200653668 -50034186 + FLAM_A SINE Alu 20 121 -21 243 390 0 8 chr2 200653948 200654071 -50033783 - MIR3 SINE MIR -5 203 82 186 272 173 50 chr2 200655148 200655350 -50032504 + L2 LINE L2 1853 2079 -1235 575 232 23 45 chr2 200655462 200655639 -50032215 - MER63A DNA MER1_type -10 200 28 196 329 99 37 chr2 200655716 200655877 -50031977 + L2 LINE L2 2330 2500 -814 2159 120 3 0 chr2 200657481 200657773 -50030081 + AluSx SINE Alu 1 293 -19 1712 156 3 11 chr2 200657772 200658055 -50029799 - AluJo SINE Alu -31 281 1 * 180 183 73 122 chr2 200658127 200658209 -50029645 - L2 LINE L2 -663 2651 2574 259 150 17 0 chr2 200658318 200658378 -50029476 - MER113 DNA MER1_type? -304 217 157 1402 138 132 72 chr2 200658662 200659010 -50028844 + MLT1B LTR MaLR 22 390 0 186 43 0 0 chr2 200659084 200659107 -50028747 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2004 137 3 0 chr2 200659110 200659395 -50028459 - AluSx SINE Alu -24 288 3 1639 194 0 20 chr2 200659823 200660117 -50027737 + AluJo SINE Alu 3 290 -22 201 213 0 40 chr2 200660169 200660244 -50027610 + CT-rich Low_complexity Low_complexity 4 75 0 239 259 0 0 chr2 200660635 200660710 -50027144 + AluJ/FRAM SINE Alu 227 301 0 397 326 77 6 chr2 200662307 200662488 -50025366 - MIR3 SINE MIR 0 208 15 489 205 82 41 chr2 200662552 200662674 -50025180 + MER63 DNA MER1_type 1 753 -309 238 163 0 20 chr2 200662675 200662724 -50025130 + MER63 DNA MER1_type 981 1028 -33 202 200 0 0 chr2 200663115 200663150 -50024704 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 278 385 75 6 chr2 200663264 200663438 -50024416 - MIR3 SINE MIR -3 205 20 377 293 68 15 chr2 200663806 200663939 -50023915 - L2 LINE L2 0 3272 3133 373 310 42 23 chr2 200664014 200664207 -50023647 + MIR3 SINE MIR 11 215 -47 1154 162 121 97 chr2 200664207 200664497 -50023357 + AluJb SINE Alu 2 298 -4 2559 287 169 40 chr2 200664611 200666576 -50021278 - L2 LINE L2 -3 3310 1038 2435 67 3 22 chr2 200666576 200666891 -50020963 + AluY SINE Alu 1 309 -2 2559 287 169 40 chr2 200666891 200667079 -50020775 - L2 LINE L2 -2275 1038 876 2354 99 3 0 chr2 200668600 200668902 -50018952 + AluSx SINE Alu 1 303 -9 2595 52 0 3 chr2 200669479 200669786 -50018068 - AluY SINE Alu -4 307 2 657 315 61 8 chr2 200670316 200670678 -50017176 - L1MC4a LINE L1 -1880 5928 5548 25 0 0 0 chr2 200670804 200670829 -50017025 + AT_rich Low_complexity Low_complexity 1 25 0 1005 138 26 48 chr2 200672700 200672889 -50014965 - AluJo SINE Alu -7 305 121 21 0 0 0 chr2 200674150 200674171 -50013683 + AT_rich Low_complexity Low_complexity 1 21 0 2219 69 3 7 chr2 200674544 200674876 -50012978 - AluY SINE Alu 0 311 1 3947 161 24 33 chr2 200675478 200676531 -50011323 - L1MB3 LINE L1 -179 6004 4961 2003 161 37 11 chr2 200676531 200676886 -50010968 + MLT1A1 LTR MaLR 2 365 0 3947 161 24 33 chr2 200676886 200676972 -50010882 - L1MB3 LINE L1 -1222 4961 4876 7054 49 10 8 chr2 200677392 200678916 -50008938 - L1PA5 LINE L1 0 6154 4626 22 35 0 0 chr2 200679202 200679231 -50008623 + AT_rich Low_complexity Low_complexity 1 29 0 322 289 94 0 chr2 200679339 200679467 -50008387 + MER117 DNA MER1_type 11 150 -47 1632 228 29 7 chr2 200679617 200680034 -50007820 + MLT1C LTR MaLR 42 467 0 885 270 147 45 chr2 200680279 200680749 -50007105 - LTR33 LTR ERVL 0 521 4 213 351 11 0 chr2 200681104 200681198 -50006656 - MIR SINE MIR -87 175 81 348 345 25 0 chr2 200681401 200681520 -50006334 + MIR SINE MIR 2 123 -139 193 282 103 0 chr2 200681711 200681789 -50006065 + MIR SINE MIR 150 235 -27 914 250 34 21 chr2 200683237 200683473 -50004381 + MIR SINE MIR 3 241 -21 1615 188 14 24 chr2 200683568 200683861 -50003993 - AluJo SINE Alu -22 290 1 227 200 0 0 chr2 200684156 200684206 -50003648 + (TA)n Simple_repeat Simple_repeat 2 51 0 1596 185 47 41 chr2 200684269 200684632 -50003222 - MLT1A1 LTR MaLR 0 365 1 750 230 162 68 chr2 200685402 200685772 -50002082 + L2 LINE L2 2888 3292 -21 767 174 111 29 chr2 200785953 200786160 -49901694 + L1MC5 LINE L1 7661 7884 -77 2159 133 3 0 chr2 200786167 200786469 -49901385 - AluSx SINE Alu -9 303 1 484 264 72 18 chr2 200786516 200786683 -49901171 - AluJb SINE Alu -15 297 122 2285 104 0 22 chr2 200786817 200787135 -49900719 - AluSx SINE Alu -1 311 1 797 265 28 5 chr2 200787488 200787699 -49900155 + LTR16A LTR ERVL 156 371 -79 2382 90 0 0 chr2 200787722 200788021 -49899833 - AluY SINE Alu -12 299 1 2211 113 0 3 chr2 200788021 200788321 -49899533 - AluSq SINE Alu -13 300 1 885 126 0 22 chr2 200788344 200788479 -49899375 - FLAM_C SINE Alu 0 133 2 329 226 0 0 chr2 200788490 200788552 -49899302 + LTR16A LTR ERVL 389 450 0 297 0 0 0 chr2 200788829 200788862 -49898992 + (CA)n Simple_repeat Simple_repeat 2 34 0 787 161 0 0 chr2 200788893 200789011 -49898843 + FLAM_C SINE Alu 2 119 -14 34 24 0 0 chr2 200789014 200789055 -49898799 + AT_rich Low_complexity Low_complexity 1 41 0 2068 100 17 10 chr2 200789055 200789344 -49898510 - AluSq SINE Alu -18 295 5 31 0 0 0 chr2 200789352 200789383 -49898471 + AT_rich Low_complexity Low_complexity 1 31 0 2072 130 0 7 chr2 200789648 200789941 -49897913 - AluSx SINE Alu -21 291 1 1005 193 0 23 chr2 200789975 200790151 -49897703 + FAM SINE Alu 1 172 -3 2181 113 6 22 chr2 200790153 200790471 -49897383 + AluSq SINE Alu 1 313 0 182 310 90 0 chr2 200790783 200790883 -49896971 + L2 LINE L2 3104 3212 -60 2236 117 0 3 chr2 200791297 200791597 -49896257 - AluSq SINE Alu -14 299 1 229 59 0 59 chr2 200791609 200791675 -49896179 - AluSp/q SINE Alu 0 313 250 180 0 0 0 chr2 200791676 200791696 -49896158 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 2307 81 3 0 chr2 200791743 200792027 -49895827 - AluSp SINE Alu -28 285 1 532 191 0 0 chr2 200792306 200792395 -49895459 - AluJ/FLAM SINE Alu -219 93 5 2392 99 0 10 chr2 200792431 200792744 -49895110 + AluSg SINE Alu 1 310 0 323 200 0 71 chr2 200792745 200792830 -49895024 + MER96B DNA MER1_type? 174 252 -165 1380 240 66 95 chr2 200792957 200793541 -49894313 + HERV16 LTR ERVL 1492 2069 -2927 1622 161 39 21 chr2 200793589 200793714 -49894140 + AluJo SINE Alu 14 135 -177 1509 151 121 15 chr2 200793714 200793979 -49893875 + AluSg1 SINE Alu 4 296 -13 1622 161 39 21 chr2 200793979 200794133 -49893721 + AluJo SINE Alu 135 298 -14 2002 185 49 66 chr2 200794178 200794691 -49893163 - MLT2B3 LTR ERVL -50 504 1 2268 97 7 3 chr2 200794693 200794992 -49892862 - AluSg SINE Alu -10 300 1 2150 53 11 35 chr2 200795307 200795592 -49892262 - AluY SINE Alu -7 304 27 910 187 14 23 chr2 200795893 200796112 -49891742 + L1MB4 LINE L1 5962 6178 -2 570 160 28 35 chr2 200796434 200796578 -49891276 + MER20B DNA MER1_type 582 724 -59 415 206 93 9 chr2 200796886 200796993 -49890861 + MER5A DNA MER1_type 74 189 0 360 0 0 0 chr2 200797017 200797057 -49890797 + (CA)n Simple_repeat Simple_repeat 1 40 0 1766 125 85 11 chr2 200797200 200797472 -49890382 + AluSc SINE Alu 1 292 -17 2170 93 7 10 chr2 200797588 200797879 -49889975 - AluSc SINE Alu -15 294 5 1344 136 14 14 chr2 200798212 200798426 -49889428 - AluSx SINE Alu -98 214 1 686 159 9 0 chr2 200798525 200798660 -49889194 - FLAM_C SINE Alu 0 141 6 901 144 8 0 chr2 200798723 200798855 -49888999 + AluJb SINE Alu 1 133 -179 1077 185 0 0 chr2 200798963 200799136 -49888718 + AluJb SINE Alu 126 298 -14 539 234 144 5 chr2 200799533 200799721 -49888133 - MIR SINE MIR -28 234 21 1311 156 212 34 chr2 200799768 200800089 -49887765 - LTR47A LTR ERVL -2 450 73 273 314 119 25 chr2 200800172 200800331 -49887523 + MLT1L LTR MaLR 218 391 -224 382 258 57 16 chr2 200800369 200800493 -49887361 + MLT1L LTR MaLR 466 594 -21 849 236 32 5 chr2 200800493 200800709 -49887145 - HAL1 LINE L1 -622 1885 1664 1372 77 33 11 chr2 200800709 200800890 -49886964 - AluSg/x SINE Alu -14 298 114 2349 97 3 6 chr2 200801058 200801369 -49886485 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr2 200801461 200801482 -49886372 + AT_rich Low_complexity Low_complexity 1 21 0 1099 173 0 0 chr2 200802086 200802265 -49885589 + AluJb SINE Alu 133 311 -1 1727 91 5 5 chr2 200803705 200803926 -49883928 - AluSx SINE Alu -91 221 1 2247 94 7 3 chr2 200804030 200804328 -49883526 - AluSp SINE Alu -13 300 2 578 121 0 30 chr2 200804537 200804636 -49883218 - AluSg/x SINE Alu -34 278 183 392 124 126 19 chr2 200804914 200805018 -49882836 + AluS SINE Alu 1 69 -232 219 204 56 0 chr2 200805026 200805080 -49882774 - MIR SINE MIR -155 107 51 1897 74 0 4 chr2 200805300 200805530 -49882324 - AluSq SINE Alu -84 229 1 1061 71 127 139 chr2 200805908 200806175 -49881679 - L1MA1 LINE L1 0 6302 6039 1915 101 65 7 chr2 200807274 200807552 -49880302 + AluSx SINE Alu 3 296 -16 423 270 86 13 chr2 200807566 200807718 -49880136 - L1MC4 LINE L1 -1124 6918 6756 2029 112 42 3 chr2 200808597 200808883 -49878971 + AluSq SINE Alu 5 301 -12 2274 109 3 0 chr2 200809162 200809464 -49878390 + AluSp SINE Alu 1 303 -10 183 80 0 0 chr2 200810271 200810296 -49877558 + (A)n Simple_repeat Simple_repeat 1 25 0 2257 113 0 0 chr2 200810402 200810702 -49877152 - AluSx SINE Alu -12 300 1 225 218 18 36 chr2 200810667 200810722 -49877132 - AluSg/x SINE Alu -132 170 117 23 54 0 0 chr2 200811356 200811393 -49876461 + AT_rich Low_complexity Low_complexity 1 37 0 * 1064 164 5 21 chr2 200811387 200811576 -49876278 - AluJb SINE Alu 0 312 127 1571 152 12 113 chr2 200811397 200811587 -49876267 - AluJb SINE Alu 0 302 159 675 117 0 0 chr2 200811587 200811690 -49876164 + (TA)n Simple_repeat Simple_repeat 2 104 0 1571 152 12 113 chr2 200811690 200811835 -49876019 - AluJb SINE Alu -143 159 1 2182 115 13 3 chr2 200812281 200812585 -49875269 - AluSx SINE Alu -5 307 1 1355 62 119 6 chr2 200812620 200812650 -49875204 - MER107 DNA MER1_type 0 197 172 203 0 0 36 chr2 200812650 200812678 -49875176 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1355 62 119 6 chr2 200812678 200812823 -49875031 - MER107 DNA MER1_type -25 172 2 911 215 6 0 chr2 200813080 200813257 -49874597 + AluSg/x SINE Alu 122 299 -11 1557 195 7 20 chr2 200813314 200813480 -49874374 - AluJo SINE Alu -14 298 136 2374 92 7 0 chr2 200813480 200813786 -49874068 - AluSq SINE Alu -5 308 1 1557 195 7 20 chr2 200813786 200813921 -49873933 - AluJo SINE Alu -176 136 1 216 250 250 0 chr2 200814639 200814727 -49873127 + MIR SINE MIR 59 168 -94 1608 156 0 101 chr2 200815029 200815376 -49872478 + AluJo SINE Alu 1 312 0 252 0 0 0 chr2 200815503 200815531 -49872323 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 1127 162 0 16 chr2 200815531 200815722 -49872132 - AluJo SINE Alu -120 192 5 2417 79 0 10 chr2 200815936 200816240 -49871614 - AluY SINE Alu -10 301 1 2122 105 25 0 chr2 200816536 200816821 -49871033 + AluSg SINE Alu 1 292 -18 930 210 0 6 chr2 200816829 200816996 -49870858 + FRAM SINE Alu 1 166 0 2285 69 3 33 chr2 200817012 200817315 -49870539 + AluY SINE Alu 1 294 -17 658 212 80 26 chr2 200817351 200817577 -49870277 + L1MC5 LINE L1 7687 7924 -37 883 93 0 0 chr2 200817793 200817900 -49869954 - U6 snRNA snRNA 0 107 1 2311 73 24 0 chr2 200818061 200818349 -49869505 - AluSp SINE Alu -13 300 6 798 173 8 0 chr2 200818372 200818499 -49869355 + FLAM_C SINE Alu 5 132 -1 1888 168 10 0 chr2 200818795 200819098 -49868756 + AluJb SINE Alu 1 306 -6 2272 100 3 7 chr2 200819101 200819411 -49868443 + AluSg1 SINE Alu 1 309 0 2663 176 38 36 chr2 200819496 200820047 -49867807 - MER68 LTR ERV1 -10 552 1 650 249 44 83 chr2 200820049 200820278 -49867576 - LTR50 LTR ERVL -189 606 387 259 291 97 19 chr2 200820332 200820435 -49867419 - MIR SINE MIR -133 129 19 2303 95 0 3 chr2 200820520 200820815 -49867039 + AluSc SINE Alu 1 294 -15 2184 109 0 0 chr2 200820824 200821107 -49866747 + AluSx SINE Alu 1 283 -29 198 254 51 51 chr2 200821813 200821872 -49865982 + L3 LINE CR1 1504 1562 -15 752 77 7 136 chr2 200821896 200822051 -49865803 - FRAM SINE Alu -20 156 22 224 307 140 20 chr2 200823520 200823670 -49864184 - L2 LINE L2 -299 2973 2806 2002 145 13 0 chr2 200824475 200824778 -49863076 - AluSx SINE Alu -2 310 4 1844 156 13 7 chr2 200825224 200825525 -49862329 - AluJo SINE Alu -9 303 1 218 175 140 18 chr2 200826374 200826431 -49861423 - MIR SINE MIR -115 93 30 1720 164 17 7 chr2 200826467 200826759 -49861095 + AluJo SINE Alu 3 297 -15 1247 135 0 5 chr2 200827436 200827621 -49860233 + AluSg1 SINE Alu 1 184 -125 2136 71 96 0 chr2 200828065 200828347 -49859507 - AluY SINE Alu -2 309 1 1569 148 23 61 chr2 200828744 200829054 -49858800 + AluJo SINE Alu 1 298 -14 2099 121 3 0 chr2 200829088 200829377 -49858477 - AluSx SINE Alu -22 290 1 216 0 0 0 chr2 200829469 200829493 -49858361 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 519 155 68 10 chr2 200829508 200829611 -49858243 + AluY SINE Alu 200 308 -3 2236 107 10 0 chr2 200829617 200829907 -49857947 + AluSg SINE Alu 1 293 -17 248 159 23 102 chr2 200830891 200830979 -49856875 + L1MC4 LINE L1 1983 6983 -1339 327 203 0 0 chr2 200830980 200831049 -49856805 + (TATG)n Simple_repeat Simple_repeat 2 70 0 2251 116 3 7 chr2 200831051 200831361 -49856493 - AluSq SINE Alu 0 313 5 551 180 31 31 chr2 200831376 200831504 -49856350 - AluJb SINE Alu 0 312 185 2257 85 3 7 chr2 200831523 200831818 -49856036 - AluSg SINE Alu -10 300 7 22 0 0 0 chr2 200832478 200832500 -49855354 + AT_rich Low_complexity Low_complexity 1 22 0 2316 101 0 0 chr2 200832730 200833028 -49854826 - AluY SINE Alu -13 298 1 1811 132 53 0 chr2 200833081 200833346 -49854508 + AluSx SINE Alu 1 279 -33 342 0 0 0 chr2 200833350 200833388 -49854466 + (TC)n Simple_repeat Simple_repeat 2 39 0 324 0 0 0 chr2 200833420 200833456 -49854398 + (CA)n Simple_repeat Simple_repeat 1 36 0 320 260 213 12 chr2 200833698 200833867 -49853987 + MLT1J2 LTR MaLR 248 450 0 979 203 60 0 chr2 200834105 200834287 -49853567 + MER58A DNA MER1_type 26 218 -6 1935 129 73 0 chr2 200834525 200834811 -49853043 + AluSg SINE Alu 1 307 -3 1724 177 7 7 chr2 200835551 200835861 -49851993 + AluJo SINE Alu 2 311 -1 2304 116 0 3 chr2 200836036 200836347 -49851507 + AluSg SINE Alu 1 310 0 418 266 73 9 chr2 200836428 200836537 -49851317 - L2 LINE L2 -14 3299 3184 219 188 0 0 chr2 200836775 200836823 -49851031 + (TA)n Simple_repeat Simple_repeat 1 48 0 506 104 26 0 chr2 200836832 200836909 -49850945 + Alu SINE Alu 231 309 0 188 348 65 39 chr2 200836939 200837094 -49850760 + L3 LINE CR1 1339 1497 -80 2317 91 0 7 chr2 200837094 200837392 -49850462 + AluSx SINE Alu 1 296 -16 1141 132 35 7 chr2 200837546 200837758 -49850096 - L1MA5A LINE L1 -15 6276 6065 2126 111 49 31 chr2 200837758 200838082 -49849772 + MER1B DNA MER1_type 4 333 -6 595 155 9 9 chr2 200838090 200838206 -49849648 - L1MA5A LINE L1 -216 6081 5966 1740 120 27 103 chr2 200838394 200838530 -49849324 - L1MA5A LINE L1 -216 6081 5936 2279 70 3 7 chr2 200838530 200838817 -49849037 - AluY SINE Alu -24 287 2 2319 76 3 3 chr2 200838826 200839117 -49848737 - AluSc SINE Alu -18 291 1 1740 120 27 103 chr2 200839117 200839312 -49848542 - L1MA5A LINE L1 -369 5928 5720 1582 206 6 3 chr2 200839312 200839623 -49848231 - AluJo SINE Alu 0 312 1 1494 157 18 136 chr2 200839623 200839955 -49847899 - AluJb SINE Alu -7 295 3 1740 120 27 103 chr2 200839955 200840019 -49847835 - L1MA5A LINE L1 -575 5722 5705 214 272 54 43 chr2 200842529 200842621 -49845233 + MIR SINE MIR 100 192 -70 1024 237 114 54 chr2 200842648 200842929 -49844925 - L2 LINE L2 -38 3275 3012 2671 26 7 3 chr2 200842929 200843239 -49844615 + AluY SINE Alu 1 311 0 1024 237 114 54 chr2 200843239 200843525 -49844329 - L2 LINE L2 -301 3012 2678 4685 124 20 26 chr2 200843710 200844402 -49843452 - LTR12 LTR ERV1 0 688 1 746 233 61 47 chr2 200844479 200844775 -49843079 - pTR5 LTR ERV1 -1410 1028 729 1840 152 13 20 chr2 200844826 200845128 -49842726 + AluJo SINE Alu 1 300 -12 450 238 147 36 chr2 200845128 200845380 -49842474 + L1MC5 LINE L1 7377 7656 -305 769 175 8 8 chr2 200846133 200846259 -49841595 - FLAM_A SINE Alu -3 139 14 22 0 0 0 chr2 200846760 200846782 -49841072 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 200847049 200847073 -49840781 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 200848214 200848236 -49839618 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 200850706 200850734 -49837120 + AT_rich Low_complexity Low_complexity 1 28 0 2123 126 0 3 chr2 200850857 200851158 -49836696 - AluSx SINE Alu -12 300 1 703 105 0 129 chr2 200851379 200851503 -49836351 + FRAM SINE Alu 57 164 -12 2125 113 3 0 chr2 200853757 200854048 -49833806 - AluY SINE Alu -19 292 1 668 130 0 37 chr2 200854360 200854468 -49833386 + FLAM_C SINE Alu 38 141 -2 2218 117 0 3 chr2 200854471 200854771 -49833083 - AluSq SINE Alu -14 299 1 189 0 0 0 chr2 200854913 200854934 -49832920 + (T)n Simple_repeat Simple_repeat 1 21 0 1309 167 48 12 chr2 200856001 200856252 -49831602 - MLT1A1 LTR MaLR 0 365 106 1279 175 94 111 chr2 200856294 200856359 -49831495 - MLT1A1 LTR MaLR 0 365 300 2419 86 3 0 chr2 200856359 200856661 -49831193 + AluSg SINE Alu 1 303 -7 1279 175 94 111 chr2 200856661 200856966 -49830888 - MLT1A1 LTR MaLR -65 300 1 1732 125 121 7 chr2 200856993 200857273 -49830581 + AluJb SINE Alu 1 312 0 300 255 159 35 chr2 200857279 200857374 -49830480 - MER112 DNA MER1_type -27 233 113 1765 161 140 6 chr2 200857374 200857696 -49830158 - MLT1A1 LTR MaLR 0 365 1 300 255 159 35 chr2 200857696 200857745 -49830109 - MER112 DNA MER1_type -147 113 71 900 220 17 6 chr2 200857748 200857921 -49829933 - MER45A DNA AcHobo -3 175 1 337 271 40 68 chr2 200858744 200858921 -49828933 + MER20B DNA MER1_type 7 178 -605 350 318 78 34 chr2 200858935 200859229 -49828625 + L2 LINE L2 2883 3293 -20 374 188 141 62 chr2 200859707 200859835 -49828019 - L1ME3A LINE L1 -5 6165 6028 536 303 73 18 chr2 200860263 200860481 -49827373 + MIR SINE MIR 27 256 -6 494 219 48 0 chr2 200861820 200861925 -49825929 - L2 LINE L2 0 3313 3204 252 264 28 14 chr2 200862191 200862263 -49825591 - MIR SINE MIR -67 141 69 2125 112 3 47 chr2 200863348 200863670 -49824184 + AluSx SINE Alu 1 308 -4 402 224 72 16 chr2 200864652 200864777 -49823077 - L1MC5 LINE L1 -416 7545 7414 2392 84 3 0 chr2 200864951 200865249 -49822605 - AluSx SINE Alu -13 299 1 763 209 90 0 chr2 200865261 200865438 -49822416 + L1MD1 LINE L1 5659 5851 -391 753 121 0 0 chr2 200865771 200865870 -49821984 - AluSg/x SINE Alu -20 289 191 1987 126 0 4 chr2 200865870 200866140 -49821714 - AluSq SINE Alu -44 269 1 1350 181 11 39 chr2 200866427 200866687 -49821167 - AluJb SINE Alu -26 286 34 270 0 0 0 chr2 200866703 200866733 -49821121 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2242 89 0 0 chr2 200866733 200867013 -49820841 - AluSg1 SINE Alu -29 280 1 237 311 38 61 chr2 200867996 200868128 -49819726 - MER5A DNA MER1_type -35 154 26 1272 101 0 0 chr2 200868291 200868459 -49819395 + AluSq SINE Alu 136 303 -10 1646 178 20 7 chr2 200868733 200869031 -49818823 - AluJb SINE Alu -7 305 4 2347 77 0 0 chr2 200869247 200869568 -49818286 - AluSq SINE Alu 0 321 1 186 43 0 0 chr2 200869573 200869596 -49818258 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1811 121 18 7 chr2 200869601 200869874 -49817980 - AluSx SINE Alu -36 276 1 326 254 88 55 chr2 200870055 200870236 -49817618 + L1MC4 LINE L1 7572 7758 -284 1946 120 34 10 chr2 200870241 200870533 -49817321 - AluSx SINE Alu -11 301 3 364 167 17 0 chr2 200870533 200870593 -49817261 - AluS SINE Alu -239 61 1 2038 105 58 0 chr2 200871352 200871647 -49816207 - AluSx SINE Alu 0 312 1 2202 85 28 0 chr2 200871858 200872141 -49815713 - AluY SINE Alu -18 293 3 26 0 0 0 chr2 200872141 200872167 -49815687 + AT_rich Low_complexity Low_complexity 1 26 0 1957 81 16 0 chr2 200872187 200872433 -49815421 - L1PA5 LINE L1 0 6154 5905 26 0 0 0 chr2 200872703 200872729 -49815125 + AT_rich Low_complexity Low_complexity 1 26 0 1800 166 7 10 chr2 200872760 200873055 -49814799 - AluJb SINE Alu -18 294 1 409 143 57 14 chr2 200873055 200873125 -49814729 - AluJo/FLAM SINE Alu -202 110 38 24 0 0 0 chr2 200873193 200873217 -49814637 + AT_rich Low_complexity Low_complexity 1 24 0 622 278 0 0 chr2 200873857 200873983 -49813871 - FLAM_A SINE Alu -7 126 1 2259 125 3 0 chr2 200876487 200876798 -49811056 - AluSx SINE Alu 0 312 1 1844 138 3 60 chr2 200876978 200877296 -49810558 - AluSx SINE Alu -12 300 1 22 35 0 0 chr2 200877435 200877464 -49810390 + AT_rich Low_complexity Low_complexity 1 29 0 1757 157 115 28 chr2 200878067 200878423 -49809431 - MLT1B LTR MaLR 0 390 4 1638 151 6 61 chr2 200878634 200878945 -49808909 + AluJo SINE Alu 1 294 -18 2123 130 0 10 chr2 200879198 200879497 -49808357 + AluSg SINE Alu 1 296 -14 1496 290 86 67 chr2 200879549 200879727 -49808127 + L2 LINE L2 1615 1788 -1526 1784 168 7 3 chr2 200879727 200880018 -49807836 - AluJo SINE Alu -9 303 12 1496 290 86 67 chr2 200880018 200880644 -49807210 + L2 LINE L2 1788 2444 -870 2146 117 3 3 chr2 200880644 200880953 -49806901 + AluSx SINE Alu 1 309 -3 1496 290 86 67 chr2 200880953 200881137 -49806717 + L2 LINE L2 2444 2623 -691 23 0 0 0 chr2 200881318 200881341 -49806513 + AT_rich Low_complexity Low_complexity 1 23 0 2008 137 0 17 chr2 200881341 200881633 -49806221 - AluSx SINE Alu -25 287 1 1804 151 51 3 chr2 200881756 200882048 -49805806 - AluSx SINE Alu -5 307 2 2121 99 3 3 chr2 200882097 200882400 -49805454 + AluSx SINE Alu 1 303 0 2339 74 10 7 chr2 200882704 200883003 -49804851 - AluY SINE Alu -11 300 1 1246 157 9 23 chr2 200883238 200883454 -49804400 + AluJb SINE Alu 86 298 -14 2371 89 0 0 chr2 200883591 200883893 -49803961 + AluSg SINE Alu 1 302 -8 1092 190 62 44 chr2 200884885 200884982 -49802872 - AluJo SINE Alu -82 230 136 2284 92 3 3 chr2 200884982 200885277 -49802577 - AluSp SINE Alu -18 295 1 1092 190 62 44 chr2 200885277 200885405 -49802449 - AluJo SINE Alu -176 136 1 1559 142 0 0 chr2 200885453 200885678 -49802176 - AluSg/x SINE Alu -11 299 75 1576 137 4 0 chr2 200886882 200887108 -49800746 - AluSq SINE Alu -86 227 1 1792 155 16 7 chr2 200887318 200887622 -49800232 - AluJo SINE Alu -5 307 1 24 53 0 0 chr2 200888153 200888191 -49799663 + AT_rich Low_complexity Low_complexity 1 38 0 686 103 0 0 chr2 200888191 200888278 -49799576 - FLAM_C SINE Alu -25 118 32 23 0 0 0 chr2 200888330 200888353 -49799501 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 200888530 200888558 -49799296 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 200888652 200888682 -49799172 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 200889391 200889413 -49798441 + AT_rich Low_complexity Low_complexity 1 22 0 739 108 117 33 chr2 200889413 200889533 -49798321 - AluJb SINE Alu -181 131 2 24 32 0 0 chr2 200889537 200889568 -49798286 + AT_rich Low_complexity Low_complexity 1 31 0 197 279 73 29 chr2 200889746 200889814 -49798040 + L3b LINE CR1 1293 1363 -220 29 20 0 39 chr2 200889823 200889849 -49798005 + AT_rich Low_complexity Low_complexity 1 26 -23 2024 130 11 3 chr2 200889849 200890134 -49797720 - AluSx SINE Alu -25 287 1 29 20 0 39 chr2 200890134 200890158 -49797696 + AT_rich Low_complexity Low_complexity 26 49 0 598 115 0 0 chr2 200890158 200890236 -49797618 - AluJ/FLAM SINE Alu -234 78 1 2351 92 0 3 chr2 200891556 200891851 -49796003 + AluSc SINE Alu 1 294 -15 1461 60 0 11 chr2 200892366 200892550 -49795304 - L1PA8 LINE L1 -1 6171 5990 305 315 48 79 chr2 200893855 200894020 -49793834 - L2 LINE L2 -10 3262 3103 2377 48 24 0 chr2 200894406 200894696 -49793158 + AluY SINE Alu 1 297 -14 1334 178 5 9 chr2 200895780 200895999 -49791855 - MER20 DNA MER1_type -1 218 1 276 305 158 12 chr2 200897395 200897502 -49790352 + MER5A DNA MER1_type 1 91 -98 2221 92 13 10 chr2 200897502 200897805 -49790049 + AluSp SINE Alu 1 304 -9 276 305 158 12 chr2 200897805 200897861 -49789993 + MER5A DNA MER1_type 91 188 -1 947 213 73 37 chr2 200898273 200898536 -49789318 + MIR SINE MIR 1 251 -11 811 164 0 16 chr2 200898573 200898695 -49789159 - FLAM_C SINE Alu -22 121 2 2157 119 0 7 chr2 200898994 200899287 -49788567 + AluSx SINE Alu 1 291 -21 1874 153 0 19 chr2 200899478 200899786 -49788068 - AluJb SINE Alu -10 302 1 880 148 0 8 chr2 200899790 200899918 -49787936 - FLAM_C SINE Alu -16 127 1 278 214 18 0 chr2 200900062 200900118 -49787736 - L2 LINE L2 0 3272 3216 252 319 25 34 chr2 200900402 200900521 -49787333 + L2 LINE L2 3196 3313 0 3186 112 7 9 chr2 200900560 200900989 -49786865 - MSTA LTR MaLR 0 428 1 1587 184 14 14 chr2 200901829 200902117 -49785737 - AluJo SINE Alu -24 288 1 1984 158 0 0 chr2 200902138 200902435 -49785419 - AluJb SINE Alu -14 298 2 406 255 13 7 chr2 200902648 200902764 -49785090 - MIR SINE MIR -46 216 101 2497 57 0 10 chr2 200902848 200903145 -49784709 - AluY SINE Alu -15 296 3 1823 139 7 14 chr2 200903977 200904265 -49783589 - AluJb SINE Alu -26 286 1 2449 61 0 23 chr2 200904660 200904970 -49782884 + AluY SINE Alu 9 311 0 273 159 0 0 chr2 200905209 200905272 -49782582 + (ATG)n Simple_repeat Simple_repeat 3 65 0 182 343 66 52 chr2 200906135 200906406 -49781448 + L2 LINE L2 2886 3160 -112 24 0 0 0 chr2 200907143 200907167 -49780687 + AT_rich Low_complexity Low_complexity 1 24 0 1674 119 8 0 chr2 200907171 200907407 -49780447 + AluSx SINE Alu 1 238 -74 2145 117 7 0 chr2 200908170 200908469 -49779385 - AluSq SINE Alu -12 301 1 1882 163 0 23 chr2 200908481 200908788 -49779066 - AluJb SINE Alu -12 300 1 193 314 35 47 chr2 200908982 200909068 -49778786 - MIR SINE MIR -73 135 51 286 333 68 0 chr2 200909369 200909501 -49778353 - MIR SINE MIR -32 230 90 232 370 11 0 chr2 200909586 200909678 -49778176 - MIR SINE MIR -168 94 2 1585 192 0 35 chr2 200909691 200910003 -49777851 - AluJo SINE Alu -11 301 1 418 203 126 44 chr2 200910088 200910270 -49777584 + MIR SINE MIR 16 212 -50 194 227 23 0 chr2 200910957 200911001 -49776853 - L2 LINE L2 -203 3069 3025 995 16 8 0 chr2 200911150 200911271 -49776583 + (GA)n Simple_repeat Simple_repeat 1 122 0 309 282 9 9 chr2 200911346 200911456 -49776398 + AluSq/x SINE Alu 1 110 -192 480 224 19 9 chr2 200911558 200911665 -49776189 - FLAM_A SINE Alu -27 115 8 2205 121 0 0 chr2 200911696 200912142 -49775712 - AluSx SINE Alu 0 446 1 1579 174 22 117 chr2 200912255 200912327 -49775527 - MLT1A1 LTR MaLR 0 365 288 2397 102 0 0 chr2 200912327 200912631 -49775223 + AluSq SINE Alu 1 304 -9 1579 174 22 117 chr2 200912631 200912961 -49774893 - MLT1A1 LTR MaLR -77 288 1 2272 132 11 52 chr2 200913156 200913234 -49774620 + MER7A DNA MER2_type 1 81 -2957 2371 85 0 0 chr2 200913234 200913529 -49774325 + AluSc SINE Alu 1 295 -14 2272 132 11 52 chr2 200913529 200913813 -49774041 + MER7A DNA MER2_type 81 346 0 624 260 45 45 chr2 200914083 200914283 -49773571 + MLT1L LTR MaLR 201 400 -215 407 260 62 60 chr2 200914842 200915187 -49772667 + MLT1K LTR MaLR 203 580 -8 2332 96 0 7 chr2 200915201 200915502 -49772352 + AluSx SINE Alu 1 299 -13 2243 95 6 44 chr2 200915516 200915659 -49772195 + AluSx SINE Alu 1 148 -164 198 0 0 0 chr2 200915659 200915681 -49772173 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 2243 95 6 44 chr2 200915681 200915853 -49772001 + AluSx SINE Alu 148 304 -8 1302 156 60 135 chr2 200916114 200916493 -49771361 - MLT1A1 LTR MaLR 0 365 45 2223 112 0 3 chr2 200916493 200916797 -49771057 - AluSx SINE Alu -9 303 1 1302 156 60 135 chr2 200916797 200916839 -49771015 - MLT1A1 LTR MaLR -320 45 1 683 157 13 101 chr2 200917628 200917787 -49770067 + FRAM SINE Alu 20 164 -12 1755 92 21 0 chr2 200917799 200918038 -49769816 + AluSp SINE Alu 66 309 -4 2119 130 0 0 chr2 200918164 200918456 -49769398 + AluSx SINE Alu 1 292 -20 1560 165 89 17 chr2 200918529 200918820 -49769034 - AluJb SINE Alu 0 312 1 984 198 57 82 chr2 200918825 200918998 -49768856 + L1MC5 LINE L1 7516 7692 -269 2215 120 0 0 chr2 200918998 200919299 -49768555 - AluSx SINE Alu -9 303 3 984 198 57 82 chr2 200919299 200919529 -49768325 + L1MC5 LINE L1 7692 7909 -52 198 305 180 17 chr2 200919670 200919903 -49767951 + L2 LINE L2 2140 2410 -904 2285 117 3 0 chr2 200920235 200920544 -49767310 + AluSp SINE Alu 3 312 -1 320 285 141 29 chr2 200920657 200920688 -49767166 - L1MA6 LINE L1 -337 5963 5933 708 255 251 32 chr2 200920688 200921465 -49766389 - L1ME3 LINE L1 -225 5937 5369 1823 164 3 16 chr2 200921081 200921392 -49766462 - AluJb SINE Alu -5 307 1 286 289 22 78 chr2 200921392 200921498 -49766356 - L1PA8A LINE L1 -705 5426 5333 533 160 50 0 chr2 200921522 200921622 -49766232 - L1MB3 LINE L1 0 6183 6079 864 214 34 63 chr2 200921666 200921904 -49765950 + MER112 DNA MER1_type 29 259 -1 1680 251 69 74 chr2 200921904 200922176 -49765678 - L1ME3 LINE L1 -832 5314 5042 2226 108 3 3 chr2 200922176 200922473 -49765381 - AluSx SINE Alu -15 297 1 1680 251 69 74 chr2 200922473 200922710 -49765144 - L1ME3 LINE L1 -1104 5042 4805 2509 112 24 27 chr2 200922710 200923086 -49764768 + THE1C LTR MaLR 1 375 0 1680 251 69 74 chr2 200923086 200923386 -49764468 - L1ME3 LINE L1 -1341 4805 4507 2021 152 7 0 chr2 200923386 200923696 -49764158 - AluSx SINE Alu 0 312 1 1680 251 69 74 chr2 200923696 200923842 -49764012 - L1ME3 LINE L1 -1639 4507 4362 1008 197 81 25 chr2 200923945 200924143 -49763711 + MER58A DNA MER1_type 1 209 -15 766 298 51 47 chr2 200924159 200924378 -49763476 - L1ME3 LINE L1 -1803 4343 4126 2193 115 0 32 chr2 200924378 200924691 -49763163 + AluSq SINE Alu 1 303 -10 766 298 51 47 chr2 200924691 200924961 -49762893 - L1ME3 LINE L1 -2020 4126 3852 2255 119 0 0 chr2 200926755 200927048 -49760806 + AluSx SINE Alu 1 293 -19 1201 191 42 83 chr2 200927141 200927477 -49760377 - MLT1A1 LTR MaLR -43 322 1 232 323 85 39 chr2 200927714 200927844 -49760010 - L2 LINE L2 -1 3271 3136 294 192 0 0 chr2 200927958 200928010 -49759844 + L2 LINE L2 3209 3260 -12 2515 66 0 0 chr2 200928025 200928329 -49759525 - AluY SINE Alu -7 304 1 1887 115 3 51 chr2 200928430 200928748 -49759106 + AluSx SINE Alu 1 304 0 24 32 0 0 chr2 200929379 200929410 -49758444 + AT_rich Low_complexity Low_complexity 1 31 0 183 344 16 0 chr2 200929866 200929927 -49757927 - MIR SINE MIR -62 146 85 * 414 310 91 118 chr2 200929925 200930289 -49757565 - L2 LINE L2 -3 3269 2916 407 265 59 0 chr2 200930340 200930442 -49757412 + MER91C DNA MER1_type 1 108 -32 371 290 201 52 chr2 200930522 200931153 -49756701 - L2 LINE L2 -547 2767 2043 2247 118 0 3 chr2 200931178 200931484 -49756370 + AluSx SINE Alu 1 305 -7 1963 145 37 0 chr2 200931868 200932164 -49755690 - AluJb SINE Alu -5 307 1 270 128 21 0 chr2 200932655 200932702 -49755152 + HsTC2 DNA Tc2 1 48 -1850 341 233 0 0 chr2 200932708 200932781 -49755073 - MIR SINE MIR -1 261 189 206 283 0 0 chr2 200932804 200932857 -49754997 - MIR SINE MIR -22 240 188 1273 293 38 14 chr2 200933343 200933760 -49754094 - LTR16A LTR ERVL -7 443 17 207 317 19 0 chr2 200933785 200933808 -49754046 + (TA)n Simple_repeat Simple_repeat 1 22 -84 2725 107 6 11 chr2 200933808 200934174 -49753680 + THE1B LTR MaLR 1 364 0 207 317 19 0 chr2 200934174 200934254 -49753600 + (TA)n Simple_repeat Simple_repeat 22 106 0 783 228 228 8 chr2 200934367 200934626 -49753228 + MER20B DNA MER1_type 20 335 -448 702 158 108 108 chr2 200934634 200934679 -49753175 - LTR50 LTR ERVL -1 794 750 2166 115 3 0 chr2 200934679 200934966 -49752888 - AluSx SINE Alu -24 288 1 702 158 108 108 chr2 200934966 200934993 -49752861 - LTR50 LTR ERVL -45 750 724 3542 101 50 14 chr2 200934993 200935455 -49752399 + MER75 DNA T2_type 2 485 -29 2013 127 0 77 chr2 200935455 200935794 -49752060 - AluSq SINE Alu 0 313 1 3542 101 50 14 chr2 200935794 200935826 -49752028 + MER75 DNA T2_type 485 514 0 702 158 108 108 chr2 200935826 200936011 -49751843 - LTR50 LTR ERVL -70 725 536 373 252 37 19 chr2 200936023 200936130 -49751724 - MERVL LTR ERVL -285 5200 5092 287 301 0 0 chr2 200936186 200936269 -49751585 - MERVL LTR ERVL -660 5104 5022 3873 321 96 48 chr2 200936508 200936870 -49750984 - MERVL LTR ERVL -955 4809 4466 2120 125 3 3 chr2 200936870 200937167 -49750687 + AluSx SINE Alu 1 297 -15 3873 321 96 48 chr2 200937167 200937192 -49750662 - MERVL LTR ERVL -1298 4466 4444 1998 164 3 0 chr2 200937192 200937502 -49750352 + AluSx SINE Alu 1 311 -1 3873 321 96 48 chr2 200937502 200940333 -49747521 - MERVL LTR ERVL -1320 4444 1379 2156 129 6 3 chr2 200940333 200940644 -49747210 - AluSx SINE Alu 0 312 1 3873 321 96 48 chr2 200940644 200940948 -49746906 - MERVL LTR ERVL -4385 1379 1091 1547 234 21 40 chr2 200940963 200941390 -49746464 + MER20B DNA MER1_type 365 783 0 350 324 66 63 chr2 200942041 200942359 -49745495 + L2 LINE L2 2954 3272 0 186 133 0 0 chr2 200942620 200942650 -49745204 + (TG)n Simple_repeat Simple_repeat 2 31 0 304 278 52 115 chr2 200942981 200943269 -49744585 - L1M2 LINE L1 -5930 919 650 208 235 12 24 chr2 200943437 200943522 -49744332 + (CGGGG)n Simple_repeat Simple_repeat 5 88 0 30 45 0 0 chr2 200943688 200943732 -49744122 + GC_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr2 200943771 200943797 -49744057 + GC_rich Low_complexity Low_complexity 1 26 0 549 257 44 38 chr2 200944951 200945134 -49742720 - MIR3 SINE MIR -12 196 13 1626 153 65 4 chr2 200945819 200945830 -49742024 - AluJb SINE Alu -19 293 284 189 0 0 0 chr2 200945830 200945851 -49742003 + (TG)n Simple_repeat Simple_repeat 2 22 0 1626 153 65 4 chr2 200945851 200946114 -49741740 - AluJb SINE Alu -28 284 2 458 221 96 10 chr2 200946588 200946692 -49741162 + MER81 DNA DNA 1 113 -1 618 280 86 16 chr2 200947521 200947764 -49740090 - MIR SINE MIR 0 262 3 225 0 0 0 chr2 200948010 200948035 -49739819 + (TA)n Simple_repeat Simple_repeat 1 25 0 288 214 0 0 chr2 200948121 200948177 -49739677 - L1ME4a LINE L1 -107 6014 5959 200 111 28 0 chr2 200948362 200948398 -49739456 + CT-rich Low_complexity Low_complexity 3 39 0 350 269 134 8 chr2 200948882 200949001 -49738853 + MER94 DNA DNA 1 134 0 437 178 37 47 chr2 200949123 200949139 -49738715 + MIR3 SINE MIR 81 96 -112 392 281 87 27 chr2 200949139 200949324 -49738530 + MER117 DNA MER1_type 1 196 -1 437 178 37 47 chr2 200949324 200949414 -49738440 + MIR3 SINE MIR 96 186 -22 2047 135 0 25 chr2 200949660 200949979 -49737875 - AluSx SINE Alu -1 311 1 21 0 0 0 chr2 200950521 200950542 -49737312 + AT_rich Low_complexity Low_complexity 1 21 0 470 259 130 19 chr2 200950562 200950724 -49737130 + MIR3 SINE MIR 19 198 -10 1182 256 120 22 chr2 200951603 200952288 -49735566 + L2 LINE L2 2565 3313 0 216 67 0 0 chr2 200952292 200952322 -49735532 + (TATATG)n Simple_repeat Simple_repeat 6 35 0 381 320 105 33 chr2 200952837 200952916 -49734938 - MIR SINE MIR -60 202 130 2271 93 0 69 chr2 200952916 200953250 -49734604 + AluSq SINE Alu 1 311 -2 381 320 105 33 chr2 200953250 200953351 -49734503 - MIR SINE MIR -132 130 9 3963 89 15 0 chr2 200954172 200954691 -49733163 - L1PB1 LINE L1 -5 6146 5620 651 181 116 72 chr2 200954736 200955028 -49732826 + L1MC5 LINE L1 7403 7707 -254 1932 162 20 0 chr2 200955059 200955362 -49732492 - AluJb SINE Alu -3 309 1 21 36 0 0 chr2 200956252 200956280 -49731574 + AT_rich Low_complexity Low_complexity 1 28 0 265 287 98 12 chr2 200956349 200956484 -49731370 + MIR SINE MIR 39 192 -63 1673 154 63 23 chr2 200957930 200958229 -49729625 - AluJb SINE Alu -1 311 1 351 303 40 0 chr2 200958280 200958379 -49729475 + MIR3 SINE MIR 57 159 -49 1522 189 114 3 chr2 200958420 200958726 -49729128 + MER58B DNA MER1_type 1 340 -1 1291 200 39 36 chr2 200961313 200961552 -49726302 - Charlie2 DNA MER1_type -12 2850 2608 6353 68 7 4 chr2 200961552 200962326 -49725528 + L1PA6 LINE L1 5374 6149 -5 1291 200 39 36 chr2 200962326 200962421 -49725433 - Charlie2 DNA MER1_type -254 2608 2515 308 73 0 0 chr2 200962559 200962600 -49725254 - Alu SINE Alu -261 41 1 1746 185 0 0 chr2 200962608 200962900 -49724954 - AluJo SINE Alu -19 293 2 487 117 19 48 chr2 200962927 200963030 -49724824 + AluSg/x SINE Alu 210 309 0 564 181 110 53 chr2 200963078 200963305 -49724549 - Charlie2 DNA MER1_type -459 2403 2164 1934 91 52 2 chr2 200963364 200963653 -49724201 + L1M2 LINE L1 5272 5571 -587 1895 78 47 4 chr2 200963711 200963966 -49723888 + AluSx SINE Alu 39 304 -8 2191 214 138 8 chr2 200963973 200964623 -49723231 - L1ME1 LINE L1 -7 6159 5425 4119 134 15 94 chr2 200964629 200965510 -49722344 - L1MA4A LINE L1 -1 6302 5492 2347 116 0 0 chr2 200965783 200966094 -49721760 - AluSx SINE Alu 0 312 2 2658 108 32 7 chr2 200966560 200966968 -49720886 - L1MC1 LINE L1 0 6333 5916 1636 140 7 26 chr2 200967192 200967463 -49720391 + AluJo SINE Alu 38 303 -9 2223 122 0 0 chr2 200968934 200969229 -49718625 - AluSx SINE Alu -17 295 1 351 0 0 0 chr2 200969290 200969329 -49718525 + (TG)n Simple_repeat Simple_repeat 2 40 0 1524 140 5 0 chr2 200970942 200971156 -49716698 - AluSx SINE Alu -97 215 1 2300 90 0 0 chr2 200971573 200971861 -49715993 - AluY SINE Alu -23 288 1 31 0 0 0 chr2 200972857 200972888 -49714966 + AT_rich Low_complexity Low_complexity 1 31 0 201 287 59 66 chr2 200974169 200974472 -49713382 - L2 LINE L2 -337 2977 2677 2004 84 84 0 chr2 200975201 200975475 -49712379 + AluSx SINE Alu 5 301 -11 300 289 41 41 chr2 200976583 200976642 -49711212 - MER5B DNA MER1_type -2 187 129 2123 84 4 0 chr2 200976642 200976905 -49710949 + AluY SINE Alu 37 300 -11 300 289 41 41 chr2 200976905 200977029 -49710825 - MER5B DNA MER1_type -59 130 4 1004 188 108 8 chr2 200977040 200977280 -49710574 - MER20B DNA MER1_type 0 783 520 1282 247 94 42 chr2 200977389 200977524 -49710330 - MER20B DNA MER1_type -277 506 379 2297 105 3 6 chr2 200977524 200977838 -49710016 - AluSq SINE Alu 0 313 1 1282 247 94 42 chr2 200977838 200978183 -49709671 - MER20B DNA MER1_type -404 379 1 1642 142 3 77 chr2 200978381 200978419 -49709435 - AluJo SINE Alu -8 304 265 1954 160 0 19 chr2 200978419 200978731 -49709123 + AluJb SINE Alu 3 308 -4 1642 142 3 77 chr2 200978731 200979015 -49708839 - AluJo SINE Alu -47 265 6 2103 109 0 3 chr2 200979164 200979447 -49708407 + AluSx SINE Alu 1 282 -30 2262 114 3 0 chr2 200979477 200979775 -49708079 + AluSx SINE Alu 5 303 -9 988 152 50 35 chr2 200979999 200980197 -49707657 + AluJo SINE Alu 104 304 -8 294 294 92 33 chr2 200980271 200980424 -49707430 - MIR3 SINE MIR -24 184 23 1936 131 28 3 chr2 200980758 200981049 -49706805 + AluSx SINE Alu 1 298 -14 314 221 58 0 chr2 200981052 200981138 -49706716 - MLT1L LTR MaLR -18 597 507 1146 175 27 18 chr2 200981150 200981373 -49706481 + MER50 LTR ERV1 1 225 -509 4480 122 107 76 chr2 200981373 200982719 -49705135 - pTR5 LTR ERV1 -12 2426 750 3106 129 33 4 chr2 200982719 200983206 -49704648 + MER50 LTR ERV1 200 700 -34 337 241 28 85 chr2 200983648 200983789 -49704065 - MLT1L LTR MaLR -351 264 132 862 261 77 88 chr2 200984396 200984840 -49703014 + L2 LINE L2 2650 3097 -216 180 0 0 0 chr2 200984840 200984860 -49702994 + (TTA)n Simple_repeat Simple_repeat 2 21 0 862 261 77 88 chr2 200984860 200984875 -49702979 + L2 LINE L2 3097 3111 -202 2173 82 10 27 chr2 200984875 200985169 -49702685 - AluSx SINE Alu -23 289 1 862 261 77 88 chr2 200985169 200985385 -49702469 + L2 LINE L2 3111 3313 0 1841 167 14 3 chr2 200985460 200985813 -49702041 - AluJo SINE Alu 0 356 1 2328 122 0 0 chr2 200985818 200986130 -49701724 - AluSx SINE Alu 0 312 1 253 361 58 21 chr2 200986389 200986580 -49701274 + L3 LINE CR1 586 783 -794 1540 189 14 28 chr2 200986719 200987005 -49700849 + AluJo SINE Alu 1 282 -30 1998 177 151 61 chr2 200987081 200987235 -49700619 - MER92B LTR ERV1 -10 626 487 2461 83 0 0 chr2 200987235 200987536 -49700318 - AluSc SINE Alu -8 301 1 1998 177 151 61 chr2 200987536 200987952 -49699902 - MER92B LTR ERV1 -149 487 5 333 155 0 0 chr2 200988006 200988064 -49699790 + (CA)n Simple_repeat Simple_repeat 2 59 0 2088 120 0 21 chr2 200988425 200988716 -49699138 - AluSg SINE Alu -15 295 11 564 277 131 77 chr2 200988796 200989262 -49698592 + L3 LINE CR1 1086 1576 -1 630 154 0 55 chr2 200989369 200989503 -49698351 - FLAM_C SINE Alu 0 147 20 2382 82 10 13 chr2 200989590 200989893 -49697961 - AluSx SINE Alu -10 302 1 384 267 67 12 chr2 200990032 200990197 -49697657 + L1ME4a LINE L1 5760 5933 -188 253 294 76 0 chr2 200990212 200990304 -49697550 + MIR3 SINE MIR 99 197 -11 201 200 33 60 chr2 200990401 200990551 -49697303 + (TTATA)n Simple_repeat Simple_repeat 3 148 0 * 224 173 99 25 chr2 200990442 200990604 -49697250 + (TTAA)n Simple_repeat Simple_repeat 4 177 0 1857 149 0 4 chr2 200990731 200991007 -49696847 + AluJb SINE Alu 1 275 -37 693 163 111 0 chr2 200991012 200991147 -49696707 - MLT1A1 LTR MaLR -215 150 1 852 187 45 0 chr2 200991223 200991378 -49696476 - FRAM SINE Alu -14 162 1 628 279 143 31 chr2 200991405 200991824 -49696030 + L1ME LINE L1 5271 5736 -385 368 297 67 42 chr2 200992360 200992562 -49695292 - MIR SINE MIR -14 248 38 1941 150 0 7 chr2 200992562 200992856 -49694998 - AluSx SINE Alu -18 294 3 368 297 67 42 chr2 200992856 200992892 -49694962 - MIR SINE MIR -224 38 4 2261 154 95 0 chr2 200993148 200993537 -49694317 + MSTB LTR MaLR 1 426 0 2106 238 73 30 chr2 200993836 200994470 -49693384 - HsTC2c DNA Tc2 -4 725 65 346 350 0 8 chr2 200994542 200994662 -49693192 - MIR SINE MIR -121 141 23 857 235 123 8 chr2 200994920 200995180 -49692674 + LTR16A1 LTR ERVL 168 457 0 1888 168 0 13 chr2 200995240 200995543 -49692311 - AluJb SINE Alu -13 299 1 2470 93 3 0 chr2 200995668 200995979 -49691875 + AluSx SINE Alu 1 312 0 1680 184 48 12 chr2 200996779 200997110 -49690744 + THE1B LTR MaLR 19 361 -3 2138 110 0 29 chr2 200997229 200997538 -49690316 - AluSx SINE Alu -12 300 1 848 155 68 0 chr2 200997538 200997686 -49690168 - FRAM SINE Alu -8 168 11 185 0 40 0 chr2 200997693 200997718 -49690136 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2343 94 3 7 chr2 200997720 200998029 -49689825 - AluSg SINE Alu -2 308 1 2124 177 103 12 chr2 200998449 200998868 -49688986 - LTR32 LTR ERVL 0 471 15 223 164 30 15 chr2 200999106 200999173 -49688681 + (TTATA)n Simple_repeat Simple_repeat 2 69 0 238 269 55 59 chr2 201000295 201000356 -49687498 - L1M4 LINE L1 -2701 3445 3385 2013 162 3 60 chr2 201000356 201000674 -49687180 - MLT1A1 LTR MaLR 0 365 71 2328 77 0 10 chr2 201000674 201000973 -49686881 - AluSq SINE Alu -17 296 1 2013 162 3 60 chr2 201000973 201001037 -49686817 - MLT1A1 LTR MaLR -294 71 5 238 269 55 59 chr2 201001037 201001246 -49686608 - L1M4 LINE L1 -2761 3385 3176 295 335 71 48 chr2 201001757 201001909 -49685945 + L2 LINE L2 2832 2979 -334 2040 121 16 32 chr2 201001909 201002224 -49685630 - AluSx SINE Alu -2 310 1 295 335 71 48 chr2 201002224 201002534 -49685320 + L2 LINE L2 2979 3305 -8 2168 97 42 0 chr2 201002708 201002996 -49684858 - AluY SINE Alu -11 300 1 1537 228 8 16 chr2 201003266 201003630 -49684224 - MLT1A1 LTR MaLR 0 365 5 2404 162 48 11 chr2 201003768 201004207 -49683647 - MSTB2 LTR MaLR 0 457 3 1991 133 28 0 chr2 201004389 201004674 -49683180 - AluSx SINE Alu -19 293 1 297 0 0 0 chr2 201005148 201005181 -49682673 + (TC)n Simple_repeat Simple_repeat 2 34 0 1796 119 36 29 chr2 201005181 201005458 -49682396 - AluJo SINE Alu -27 285 7 355 243 9 28 chr2 201006147 201006254 -49681600 - LTR16C LTR ERVL -2 489 385 2146 126 3 3 chr2 201007199 201007493 -49680361 - AluJb SINE Alu -18 294 1 210 147 0 0 chr2 201007637 201007671 -49680183 + (TG)n Simple_repeat Simple_repeat 1 34 0 317 163 104 96 chr2 201007704 201007839 -49680015 + MLT1K LTR MaLR 449 584 -4 1658 147 11 23 chr2 201007874 201008139 -49679715 - AluJb SINE Alu -45 267 6 313 369 99 24 chr2 201008174 201008426 -49679428 - L1ME LINE L1 -558 5563 5293 2007 152 0 3 chr2 201008613 201008910 -49678944 - AluSx SINE Alu -16 296 1 904 316 33 31 chr2 201008949 201009404 -49678450 + LTR16B LTR ERVL 1 430 -34 207 0 0 0 chr2 201009443 201009466 -49678388 + (TG)n Simple_repeat Simple_repeat 2 24 0 1614 171 60 0 chr2 201009483 201009764 -49678090 + AluJb SINE Alu 1 298 -14 1123 153 50 39 chr2 201009769 201009905 -49677949 - L1MA8 LINE L1 -83 6214 6082 1785 87 136 0 chr2 201009905 201010170 -49677684 - AluY SINE Alu 0 301 1 1123 153 50 39 chr2 201010170 201010276 -49677578 - L1MA8 LINE L1 -215 6082 5979 270 205 55 39 chr2 201010533 201010660 -49677194 - HAL1b LINE L1 -197 1151 1023 4471 85 46 3 chr2 201110671 201111318 -49576536 + L1PA13 LINE L1 5489 6163 0 394 202 184 9 chr2 201111318 201111427 -49576427 + Tigger3(Golem) DNA MER2_type 2901 3028 -1 439 188 60 0 chr2 201111501 201111618 -49576236 + L1M4 LINE L1 4639 4762 -1384 293 308 38 0 chr2 201111837 201111996 -49575858 + L1M4c LINE L1 1406 1570 -4814 6043 153 26 18 chr2 201112236 201113575 -49574279 - L1P4 LINE L1 -599 5564 4221 7249 33 1 1 chr2 201113575 201114502 -49573352 - L1P LINE L1 -777 5369 4443 4544 135 3 4 chr2 201114603 201115360 -49572494 + L1P LINE L1 3468 4223 -1923 3008 22 0 19 chr2 201115601 201115962 -49571892 - L1PA3 LINE L1 -3 6152 5799 5326 52 7 3 chr2 201115962 201116689 -49571165 + L1P LINE L1 3867 4596 -1550 218 362 13 54 chr2 201116873 201117022 -49570832 - L2 LINE L2 -263 3009 2867 258 348 54 0 chr2 201117083 201117175 -49570679 + L3 LINE CR1 1462 1558 -19 21 0 0 0 chr2 201117297 201117318 -49570536 + AT_rich Low_complexity Low_complexity 1 21 0 363 206 20 39 chr2 201117364 201117466 -49570388 - L3b LINE CR1 -382 1201 1102 293 263 83 45 chr2 201117902 201118058 -49569796 + L2 LINE L2 3150 3311 -2 4215 173 24 7 chr2 201118198 201118313 -49569541 - L1P LINE L1 -2994 3152 3040 2820 10 3 0 chr2 201118313 201118624 -49569230 - AluYb8 SINE Alu -6 312 1 4215 173 24 7 chr2 201118624 201119379 -49568475 - L1P LINE L1 -3106 3040 2267 331 218 0 0 chr2 201119419 201119474 -49568380 - Tigger3(Golem) DNA MER2_type -2970 59 5 2229 234 54 25 chr2 201119481 201120243 -49567611 - L1M4 LINE L1 -1621 4525 3738 2341 96 3 0 chr2 201120243 201120546 -49567308 - AluSp SINE Alu -9 304 1 2229 234 54 25 chr2 201120546 201120574 -49567280 - L1M4 LINE L1 -2408 3738 3712 35634 84 22 9 chr2 201120930 201126276 -49561578 + L1P LINE L1 11 5422 -732 1886 111 36 7 chr2 201126380 201126659 -49561195 - AluSx SINE Alu -25 287 1 270 236 34 45 chr2 201127116 201127205 -49560649 + MIR SINE MIR 83 170 -92 279 0 0 0 chr2 201127796 201127827 -49560027 + (CAG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr2 201128567 201128588 -49559266 + (TTCTCC)n Simple_repeat Simple_repeat 6 26 0 447 243 14 19 chr2 201128590 201128798 -49559056 - AluJb SINE Alu -1 311 1 279 333 54 0 chr2 201128798 201128891 -49558963 + L2 LINE L2 2947 3044 -269 526 296 114 29 chr2 201129002 201129343 -49558511 - MLT1J2 LTR MaLR -13 437 68 238 217 0 0 chr2 201129487 201129533 -49558321 - MLT1J2 LTR MaLR -128 322 277 309 182 31 0 chr2 201129625 201129713 -49558141 - MLT1J2 LTR MaLR -291 176 66 393 311 0 40 chr2 201129762 201129910 -49557944 + L2 LINE L2 3168 3309 -4 2129 125 0 0 chr2 201130588 201130877 -49556977 - AluSx SINE Alu -23 289 1 235 200 0 0 chr2 201130923 201130968 -49556886 - MER69 DNA AcHobo -3 2523 2479 393 321 92 49 chr2 201130979 201131306 -49556548 + L1M2 LINE L1 910 1250 -5599 1293 174 76 31 chr2 201133327 201133615 -49554239 + AluJb SINE Alu 1 301 -11 530 281 91 10 chr2 201136058 201136257 -49551597 + MIR SINE MIR 18 232 -30 218 295 11 32 chr2 201136759 201136854 -49551000 - MIR SINE MIR -2 260 168 2460 88 0 0 chr2 201136968 201137275 -49550579 - AluY SINE Alu -4 307 1 2210 107 7 0 chr2 201137578 201137876 -49549978 - AluSx SINE Alu -12 300 1 1773 79 128 4 chr2 201138665 201138930 -49548924 + AluY SINE Alu 1 298 -3 464 291 143 10 chr2 201139184 201139380 -49548474 + MIR SINE MIR 25 246 -16 250 174 185 22 chr2 201139987 201140079 -49547775 + MIR SINE MIR 14 120 -142 274 333 59 10 chr2 201140195 201140297 -49547557 + L2 LINE L2 3162 3268 -4 28 61 0 0 chr2 201140766 201140815 -49547039 + AT_rich Low_complexity Low_complexity 1 49 0 1823 45 0 0 chr2 201141794 201142017 -49545837 - L1PA4 LINE L1 -2 6153 5931 1921 169 0 3 chr2 201142627 201142922 -49544932 - AluJb SINE Alu -18 294 1 330 194 16 0 chr2 201144772 201144834 -49543020 + MER5B DNA MER1_type 1 63 -115 1666 155 7 62 chr2 201145052 201145361 -49542493 + AluJo SINE Alu 1 292 -20 245 254 0 17 chr2 201145370 201145429 -49542425 + MER5B DNA MER1_type 51 108 -70 306 0 0 0 chr2 201145446 201145480 -49542374 + (TG)n Simple_repeat Simple_repeat 1 34 0 1326 188 4 48 chr2 201145480 201145752 -49542102 - AluJb SINE Alu -31 281 22 350 185 0 15 chr2 201145752 201145817 -49542037 + MER5B DNA MER1_type 114 177 -1 1205 212 50 53 chr2 201145860 201146256 -49541598 - MSTD LTR MaLR -1 395 1 229 333 24 0 chr2 201146535 201146619 -49541235 + MIR SINE MIR 82 167 -95 560 262 64 39 chr2 201147351 201147647 -49540207 - L1M3 LINE L1 -334 5849 5551 4938 60 3 5 chr2 201147658 201148297 -49539557 - L1PA6 LINE L1 -5 6149 5512 253 277 0 15 chr2 201148569 201148634 -49539220 + GA-rich Low_complexity Low_complexity 3 66 0 28 71 0 0 chr2 201150535 201150591 -49537263 + AT_rich Low_complexity Low_complexity 1 56 0 866 280 119 49 chr2 201150725 201151221 -49536633 + L2 LINE L2 2789 3313 0 197 283 11 98 chr2 201151262 201151354 -49536500 - L2 LINE L2 -512 2802 2719 349 292 0 31 chr2 201151678 201151808 -49536046 - MER94 DNA DNA -8 126 1 2001 131 11 0 chr2 201151827 201152129 -49535725 + AluSx SINE Alu 1 305 0 595 227 8 0 chr2 201153045 201153177 -49534677 + MER94 DNA DNA 1 133 -1 22 0 0 0 chr2 201155801 201155823 -49532031 + GC_rich Low_complexity Low_complexity 1 22 0 352 287 142 69 chr2 201155830 201156324 -49531530 + L1M2 LINE L1 535 1064 -5785 533 269 188 40 chr2 201157132 201157611 -49530243 + MLT1K LTR MaLR 33 582 -6 1448 167 82 27 chr2 201157846 201157945 -49529909 + AluJo SINE Alu 1 93 -219 1999 63 0 42 chr2 201157945 201158232 -49529622 + L1PA7 LINE L1 5880 6154 0 1448 167 82 27 chr2 201158232 201158425 -49529429 + AluJo SINE Alu 93 309 -3 244 238 24 0 chr2 201158441 201158525 -49529329 + GA-rich Low_complexity Low_complexity 2 87 0 373 346 31 24 chr2 201158775 201159133 -49528721 - L3 LINE CR1 -75 1502 1073 930 278 128 26 chr2 201159159 201159262 -49528592 + MER69 DNA AcHobo 59 150 -1076 1350 174 112 38 chr2 201159262 201159601 -49528253 + MLT1A1 LTR MaLR 1 364 -1 930 278 128 26 chr2 201159601 201159964 -49527890 + MER69 DNA AcHobo 150 573 -653 * 1322 200 24 3 chr2 201159961 201160291 -49527563 + MER69 DNA AcHobo 2012 2348 -178 227 31 31 0 chr2 201160305 201160337 -49527517 + (TTG)n Simple_repeat Simple_repeat 2 34 0 864 102 24 0 chr2 201160340 201160467 -49527387 - AluSg/x SINE Alu -18 294 165 661 232 121 11 chr2 201161085 201161275 -49526579 - L1ME3A LINE L1 -3 6167 5957 23 0 0 0 chr2 201161977 201162000 -49525854 + AT_rich Low_complexity Low_complexity 1 23 0 30 59 0 0 chr2 201162045 201162096 -49525758 + AT_rich Low_complexity Low_complexity 1 51 0 26 50 0 0 chr2 201163862 201163902 -49523952 + AT_rich Low_complexity Low_complexity 1 40 0 3423 104 99 24 chr2 201164091 201164686 -49523168 - MER51C LTR ERV1 0 640 1 709 237 171 62 chr2 201164966 201165400 -49522454 + L1MC4a LINE L1 5495 5975 -1833 1971 201 52 18 chr2 201165552 201166135 -49521719 + L1ME1 LINE L1 4856 5458 -708 2082 215 42 31 chr2 201166137 201166757 -49521097 + L1ME1 LINE L1 5553 6332 -2 2048 75 9 107 chr2 201166808 201167153 -49520701 - AluSx SINE Alu -1 311 1 645 206 54 141 chr2 201167227 201167574 -49520280 + L1MD2 LINE L1 5960 6265 -94 1990 140 7 3 chr2 201167574 201167867 -49519987 + AluSx SINE Alu 1 294 -18 645 206 54 141 chr2 201167867 201167946 -49519908 + L1MD2 LINE L1 6265 6349 -10 21 36 0 0 chr2 201168365 201168393 -49519461 + AT_rich Low_complexity Low_complexity 1 28 0 235 303 13 0 chr2 201170982 201171058 -49516796 + (CATATA)n Simple_repeat Simple_repeat 5 81 0 1836 170 3 3 chr2 201172229 201172540 -49515314 - AluJb SINE Alu -1 311 1 229 339 78 50 chr2 201173152 201173186 -49514668 - L2 LINE L2 -1077 2237 2205 2170 90 17 23 chr2 201173186 201173485 -49514369 + AluSc SINE Alu 2 298 -11 229 339 78 50 chr2 201173485 201173668 -49514186 - L2 LINE L2 -1109 2205 2014 724 128 16 0 chr2 201174125 201174250 -49513604 + L1MB1 LINE L1 6042 6168 0 46 54 0 0 chr2 201174319 201174393 -49513461 + AT_rich Low_complexity Low_complexity 1 74 0 773 306 19 23 chr2 201174412 201174670 -49513184 - MIR SINE MIR -1 261 5 297 216 0 81 chr2 201175531 201175605 -49512249 - MIR SINE MIR -194 68 1 353 169 11 23 chr2 201177332 201177449 -49510405 + AluSg/x SINE Alu 199 287 -15 339 191 0 0 chr2 201177494 201177562 -49510292 + (TA)n Simple_repeat Simple_repeat 1 68 0 852 294 95 20 chr2 201178041 201178170 -49509684 + LTR33 LTR ERVL 31 149 -372 2270 110 0 3 chr2 201178170 201178478 -49509376 + AluSc SINE Alu 1 307 -2 852 294 95 20 chr2 201178478 201178801 -49509053 + LTR33 LTR ERVL 149 517 -4 329 182 0 0 chr2 201179408 201179463 -49508391 - Tigger5 DNA MER2_type -3 2320 2266 357 225 0 0 chr2 201179468 201179539 -49508315 + Tigger5 DNA MER2_type 2250 2320 -3 * 395 202 53 11 chr2 201179539 201179615 -49508239 - Tigger5 DNA MER2_type -2240 83 4 553 238 26 15 chr2 201179630 201179899 -49507955 + L1ME3A LINE L1 5841 6165 -5 2154 171 0 24 chr2 201180344 201180718 -49507136 + MLT1A1 LTR MaLR 1 365 0 2385 169 41 9 chr2 201180785 201181274 -49506580 + L1MB3 LINE L1 5658 6158 -25 2097 113 32 0 chr2 201182351 201182635 -49505219 - AluSc SINE Alu -16 293 1 1858 204 42 42 chr2 201182821 201183194 -49504660 - MLT1D LTR MaLR -3 502 127 2583 92 0 67 chr2 201183194 201183519 -49504335 + THE1B LTR MaLR 1 297 -67 2076 114 0 30 chr2 201183519 201183818 -49504036 + AluY SINE Alu 1 290 -21 2583 92 0 67 chr2 201183818 201183882 -49503972 + THE1B LTR MaLR 297 364 0 1858 204 42 42 chr2 201183882 201183979 -49503875 - MLT1D LTR MaLR -377 128 32 415 255 101 75 chr2 201184150 201184417 -49503437 + MLT1J LTR MaLR 228 501 -10 1510 141 43 50 chr2 201184829 201184984 -49502870 - AluJo SINE Alu -37 275 120 2489 84 40 30 chr2 201184984 201185355 -49502499 - THE1C LTR MaLR 0 375 1 1510 141 43 50 chr2 201185355 201185377 -49502477 - AluJo SINE Alu -192 120 99 2628 85 8 3 chr2 201185377 201185730 -49502124 + THE1A LTR MaLR 1 355 0 1510 141 43 50 chr2 201185730 201185828 -49502026 - AluJo SINE Alu -213 99 1 1143 264 74 64 chr2 201186615 201187114 -49500740 - LTR33 LTR ERVL -3 518 15 2235 64 39 51 chr2 201187184 201187495 -49500359 - AluY SINE Alu -4 307 1 684 133 29 92 chr2 201187888 201187955 -49499899 - L1MB8 LINE L1 -13 6165 6095 2384 86 7 0 chr2 201187955 201188259 -49499595 - AluSp SINE Alu -7 306 1 684 133 29 92 chr2 201188259 201188364 -49499490 - L1MB8 LINE L1 -83 6095 6004 5123 158 22 20 chr2 201188863 201190415 -49497439 - L1MA4 LINE L1 0 6300 4746 603 335 81 73 chr2 201190631 201190837 -49497017 + L2 LINE L2 2152 2355 -917 1801 232 118 28 chr2 201190837 201191381 -49496473 + MLT1E LTR MaLR 1 593 0 603 335 81 73 chr2 201191381 201192269 -49495585 + L2 LINE L2 2355 3254 -18 1876 31 9 9 chr2 201192620 201192849 -49495005 + AluY SINE Alu 83 311 0 552 247 65 18 chr2 201192980 201193150 -49494704 - LTR16C LTR ERVL -2 489 312 273 370 43 39 chr2 201194251 201194505 -49493349 - L2 LINE L2 -1277 2037 1783 310 213 98 14 chr2 201194537 201194641 -49493213 - MIR SINE MIR -38 170 61 743 206 0 7 chr2 201194858 201194999 -49492855 + FRAM SINE Alu 4 143 -33 198 0 0 0 chr2 201195003 201195025 -49492829 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 1067 265 113 13 chr2 201195618 201195991 -49491863 + MLT1J LTR MaLR 25 434 -77 304 281 0 10 chr2 201195988 201196084 -49491770 - LTR16C LTR ERVL -48 443 349 * 1444 173 32 107 chr2 201196649 201197059 -49490795 - MLT1D LTR MaLR -125 380 2 629 300 51 66 chr2 201197487 201198153 -49489701 + L1ME LINE L1 64 719 -5351 1399 222 12 15 chr2 201198158 201198491 -49489363 - MER58B DNA MER1_type -9 332 1 516 257 0 6 chr2 201198493 201198672 -49489182 + L1ME LINE L1 714 891 -5179 2256 104 0 3 chr2 201199022 201199321 -49488533 + AluY SINE Alu 1 298 -13 320 280 116 25 chr2 201199395 201199670 -49488184 - L1ME4a LINE L1 -85 6036 5737 238 269 88 44 chr2 201199852 201200034 -49487820 + MLT1I LTR MaLR 198 387 -22 1002 165 12 6 chr2 201200176 201200340 -49487514 + FRAM SINE Alu 2 166 0 482 258 137 33 chr2 201200457 201200503 -49487351 - MIR SINE MIR -2 260 220 2251 107 3 7 chr2 201200503 201200801 -49487053 - AluSx SINE Alu -15 297 1 482 258 137 33 chr2 201200801 201200827 -49487027 - MIR SINE MIR -42 220 198 2378 206 4 9 chr2 201200827 201201289 -49486565 - LTR40b LTR ERVL 0 462 3 482 258 137 33 chr2 201201289 201201397 -49486457 - MIR SINE MIR -64 198 60 880 182 24 0 chr2 201202163 201202328 -49485526 - AluJo SINE Alu -25 287 119 879 232 53 59 chr2 201202399 201202491 -49485363 - MER2 DNA MER2_type -6 339 248 1712 141 90 11 chr2 201202491 201202768 -49485086 + AluJb SINE Alu 1 299 -13 879 232 53 59 chr2 201202768 201203016 -49484838 - MER2 DNA MER2_type -97 248 1 220 310 0 0 chr2 201203840 201203898 -49483956 - L2 LINE L2 0 3272 3215 6393 181 19 30 chr2 201203948 201205391 -49482463 + L1MA9 LINE L1 3713 5138 -1008 2695 176 24 44 chr2 201205773 201206159 -49481695 + L1MA9 LINE L1 5691 6083 -229 2328 112 99 8 chr2 201206159 201206551 -49481303 - MSTA LTR MaLR 0 428 1 2695 176 24 44 chr2 201206551 201206635 -49481219 + L1MA9 LINE L1 6083 6167 -145 2250 70 0 11 chr2 201206635 201206948 -49480906 + AluY SINE Alu 1 310 0 2695 176 24 44 chr2 201206948 201207110 -49480744 + L1MA9 LINE L1 6167 6312 0 428 240 0 0 chr2 201207222 201207318 -49480536 - MER94 DNA DNA -2 132 37 3261 236 75 21 chr2 201207320 201207545 -49480309 + L1M4 LINE L1 3125 3336 -2810 2312 166 66 69 chr2 201207545 201207742 -49480112 + MER6A DNA MER2_type 1 197 -668 264 100 0 0 chr2 201207742 201207782 -49480072 + (TG)n Simple_repeat Simple_repeat 1 40 0 2312 166 66 69 chr2 201207782 201207962 -49479892 + MER6A DNA MER2_type 197 376 -489 2131 115 7 0 chr2 201207962 201208258 -49479596 - AluSx SINE Alu -14 298 1 2312 166 66 69 chr2 201208258 201208486 -49479368 + MER6A DNA MER2_type 376 605 0 3261 236 75 21 chr2 201208486 201208826 -49479028 + L1M4 LINE L1 3336 3656 -2490 1944 167 3 0 chr2 201208826 201209126 -49478728 + AluSx SINE Alu 1 301 -11 3261 236 75 21 chr2 201209126 201209898 -49477956 + L1M4 LINE L1 3656 4536 -1610 249 217 14 0 chr2 201210144 201210213 -49477641 - L1MC/D LINE L1 -1919 5889 5820 * 286 250 27 11 chr2 201210212 201210329 -49477525 - L1MC4 LINE L1 0 8042 7868 485 321 52 10 chr2 201210450 201210643 -49477211 + MIR SINE MIR 24 224 -38 2162 70 42 7 chr2 201210838 201211124 -49476730 + AluY SINE Alu 1 296 -15 383 315 122 33 chr2 201211511 201211692 -49476162 - L2 LINE L2 0 3272 3076 367 324 103 0 chr2 201211902 201212038 -49475816 - L2 LINE L2 -558 2756 2607 395 211 33 72 chr2 201212174 201212326 -49475528 + L1M4 LINE L1 4591 4736 -1410 1751 135 17 24 chr2 201213032 201213329 -49474525 + AluJb SINE Alu 6 300 -12 182 387 0 0 chr2 201214370 201214445 -49473409 + L2 LINE L2 3189 3263 -9 234 300 0 0 chr2 201214454 201214514 -49473340 - L2 LINE L2 -18 3295 3236 1315 291 147 33 chr2 201214574 201215170 -49472684 + L2 LINE L2 2098 2625 -688 2189 59 20 52 chr2 201215170 201215475 -49472379 - AluY SINE Alu -16 295 1 1315 291 147 33 chr2 201215475 201215952 -49471902 + L2 LINE L2 2625 3313 0 1848 159 0 13 chr2 201216933 201217242 -49470612 - AluJo SINE Alu -7 305 1 249 215 13 51 chr2 201218178 201218257 -49469597 - HAL1 LINE L1 -1644 863 788 260 230 23 35 chr2 201218299 201218386 -49469468 - MLT1L LTR MaLR -325 290 205 2065 134 0 30 chr2 201219031 201219336 -49468518 + AluSx SINE Alu 1 296 -16 711 284 129 30 chr2 201220152 201220515 -49467339 - MLT1I LTR MaLR -10 399 1 231 224 45 0 chr2 201221526 201221593 -49466261 + (TA)n Simple_repeat Simple_repeat 1 70 0 10480 154 23 20 chr2 201221818 201223485 -49464369 - L1MA7 LINE L1 0 7710 6049 1247 185 52 106 chr2 201223485 201223853 -49464001 + MER7A DNA MER2_type 1 346 0 10480 154 23 20 chr2 201223853 201224596 -49463258 - L1MA7 LINE L1 -1661 6049 5170 2141 118 0 0 chr2 201224596 201224885 -49462969 - AluSg SINE Alu -16 294 6 10480 154 23 20 chr2 201224885 201225269 -49462585 - L1MA7 LINE L1 -2540 5170 4789 1293 272 36 7 chr2 201225359 201225940 -49461914 - L1MA7 LINE L1 -4172 3394 2688 2118 142 42 0 chr2 201225940 201226277 -49461577 - MSTB LTR MaLR 0 426 76 1908 130 23 3 chr2 201226411 201226710 -49461144 + AluSx SINE Alu 1 305 -7 1181 156 27 146 chr2 201227021 201227431 -49460423 + MLT1A1 LTR MaLR 3 363 -2 2106 118 139 18 chr2 201227583 201227965 -49459889 + MSTA LTR MaLR 1 428 0 518 318 77 55 chr2 201228698 201229192 -49458662 - MER110-int LTR ERV1 -2254 2393 1889 2854 88 25 0 chr2 201229196 201229593 -49458261 - L1PA11 LINE L1 -1 7611 7205 21174 164 49 52 chr2 201229735 201230098 -49457756 - L1PA11 LINE L1 -413 7199 6836 2168 59 0 7 chr2 201230098 201230368 -49457486 - AluY SINE Alu -5 306 39 21174 164 49 52 chr2 201230368 201233614 -49454240 - L1PA11 LINE L1 -776 6836 3580 1643 133 0 8 chr2 201233614 201233863 -49453991 - AluSg/x SINE Alu 0 312 66 21174 164 49 52 chr2 201233863 201234282 -49453572 - L1PA11 LINE L1 -4032 3580 3161 799 75 90 45 chr2 201234282 201234415 -49453439 + MER85 DNA T2_type 1 139 0 21174 164 49 52 chr2 201234415 201236173 -49451681 - L1PA11 LINE L1 -4451 3161 76 5760 208 14 34 chr2 201236295 201237488 -49450366 - MSTB-int LTR MaLR -482 1169 1 1978 182 56 15 chr2 201237499 201237894 -49449960 - MSTB LTR MaLR -13 413 3 7333 221 33 52 chr2 201237949 201240224 -49447630 - L1M3de LINE L1 -4516 2137 3 380 259 70 21 chr2 201241418 201241561 -49446293 - MIR SINE MIR -31 231 82 287 311 171 40 chr2 201241748 201242069 -49445785 - L2 LINE L2 -557 2757 2395 5243 166 55 18 chr2 201243353 201244773 -49443081 - L1MC2 LINE L1 0 6344 4875 1856 159 28 43 chr2 201244923 201245319 -49442535 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr2 201245367 201245388 -49442466 + AT_rich Low_complexity Low_complexity 1 21 0 1916 154 9 38 chr2 201246018 201246362 -49441492 - MER1B DNA MER1_type 0 337 4 1064 148 49 54 chr2 201246426 201246629 -49441225 + AluJb SINE Alu 86 287 -25 1682 181 3 7 chr2 201246652 201246951 -49440903 + AluJb SINE Alu 2 299 -13 260 311 60 27 chr2 201246977 201247160 -49440694 + L1ME LINE L1 5315 5503 -2305 488 262 7 0 chr2 201247230 201247375 -49440479 + L1ME LINE L1 5635 5780 -341 29 28 0 0 chr2 201247439 201247475 -49440379 + AT_rich Low_complexity Low_complexity 1 36 0 3758 190 78 21 chr2 201247780 201248595 -49439259 - MER21B LTR ERV1 -1 862 1 542 231 194 0 chr2 201248828 201249044 -49438810 + MER112 DNA MER1_type 2 259 -1 227 338 88 0 chr2 201249556 201249636 -49438218 - MIR3 SINE MIR -32 176 90 680 153 282 6 chr2 201250089 201250252 -49437602 - MER3 DNA MER1_type -1 208 1 200 211 18 147 chr2 201251001 201251110 -49436744 - MIR3 SINE MIR -25 183 89 214 344 21 32 chr2 201251306 201251399 -49436455 - MIR3 SINE MIR -113 95 4 2252 102 7 0 chr2 201251714 201252019 -49435835 + AluY SINE Alu 1 307 -4 416 357 67 41 chr2 201252822 201253332 -49434522 + L2 LINE L2 2232 2754 -560 442 160 80 0 chr2 201253874 201253974 -49433880 + L1MB3 LINE L1 6069 6176 -7 5631 97 10 81 chr2 201254545 201255114 -49432740 - L1MC1 LINE L1 -5 6328 5855 2251 103 10 3 chr2 201255114 201255424 -49432430 - AluSx SINE Alu 0 312 1 5631 97 10 81 chr2 201255424 201255826 -49432028 - L1MC1 LINE L1 -478 5855 5426 855 237 93 14 chr2 201256838 201257053 -49430801 - MIR SINE MIR 0 262 31 261 232 14 0 chr2 201257804 201257873 -49429981 + L1ME LINE L1 5754 5823 -298 209 331 192 15 chr2 201258336 201258466 -49429388 + L2 LINE L2 2894 3046 -226 776 274 59 9 chr2 201258570 201258789 -49429065 - MIR SINE MIR -25 237 8 317 382 72 13 chr2 201258794 201258946 -49428908 + L2 LINE L2 3097 3257 -15 300 308 86 34 chr2 201258926 201259043 -49428811 - L2 LINE L2 -3 3269 3147 * 21 36 0 0 chr2 201259534 201259562 -49428292 + AT_rich Low_complexity Low_complexity 1 28 0 2253 108 3 0 chr2 201261405 201261711 -49426143 + AluSx SINE Alu 1 307 -5 1935 128 25 11 chr2 201262321 201262603 -49425251 + AluSx SINE Alu 5 290 -22 360 226 55 49 chr2 201262842 201262867 -49424987 - L1MA10 LINE L1 -1 6333 6309 3332 209 94 21 chr2 201262867 201264004 -49423850 - L1ME1 LINE L1 -15 6151 4946 1594 157 24 31 chr2 201264006 201264299 -49423555 - AluJb SINE Alu -21 291 1 1704 171 34 3 chr2 201264313 201264640 -49423214 - L1M4 LINE L1 -420 5764 5428 * 7105 224 60 44 chr2 201264636 201265026 -49422828 - L1MB5 LINE L1 -1 6409 6027 183 80 0 0 chr2 201265026 201265051 -49422803 + (CA)n Simple_repeat Simple_repeat 1 25 0 7105 224 60 44 chr2 201265051 201266296 -49421558 - L1MB5 LINE L1 -383 6027 4803 1064 173 50 15 chr2 201266296 201266498 -49421356 + MER6B DNA MER2_type 2 210 0 7105 224 60 44 chr2 201266498 201266576 -49421278 - L1MB5 LINE L1 -1607 4803 4728 379 117 17 0 chr2 201266576 201266636 -49421218 - FLAM SINE Alu -6 127 67 7105 224 60 44 chr2 201266636 201267807 -49420047 - L1MB5 LINE L1 -1682 4728 3577 257 104 0 83 chr2 201267807 201267855 -49419999 + MER57A LTR ERV1 290 333 -70 7105 224 60 44 chr2 201267855 201268898 -49418956 - L1MB5 LINE L1 -2833 3577 2215 557 217 57 29 chr2 201268905 201269080 -49418774 - L1MB5 LINE L1 -4501 1883 1704 767 214 49 44 chr2 201269183 201269293 -49418561 - L1MB5 LINE L1 -4591 1791 1683 2296 83 3 13 chr2 201269293 201269606 -49418248 - AluY SINE Alu 0 311 2 767 214 49 44 chr2 201269606 201269769 -49418085 - L1MB5 LINE L1 -4699 1683 1437 335 116 0 0 chr2 201369775 201369857 -49317997 + Alu SINE Alu 238 319 0 1085 310 24 12 chr2 201369862 201370194 -49317660 + MER115 DNA AcHobo 358 693 0 1600 138 8 30 chr2 201371012 201371113 -49316741 + AluSx SINE Alu 40 142 -170 2470 79 3 0 chr2 201371113 201371417 -49316437 + AluSg SINE Alu 1 305 -5 1290 157 15 105 chr2 201371420 201371744 -49316110 + AluJb SINE Alu 2 296 -6 258 245 51 41 chr2 201371989 201372087 -49315767 + MIR3 SINE MIR 101 199 -9 2129 134 0 0 chr2 201372587 201372885 -49314969 + AluSx SINE Alu 7 304 -8 1587 210 39 104 chr2 201372886 201373475 -49314379 + L1MB7 LINE L1 3088 3613 -2533 1960 149 9 22 chr2 201373475 201373790 -49314064 + AluSx SINE Alu 1 311 -1 1587 210 39 104 chr2 201373790 201374001 -49313853 + L1MB7 LINE L1 3613 3836 -2310 1415 84 0 26 chr2 201374121 201374311 -49313543 - AluY SINE Alu -28 283 99 1508 185 32 75 chr2 201374311 201374558 -49313296 + L1MB7 LINE L1 4027 4283 -1863 1895 152 3 7 chr2 201374558 201374848 -49313006 + AluJb SINE Alu 1 289 -23 1508 185 32 75 chr2 201374848 201375237 -49312617 + L1MB7 LINE L1 4283 4584 -1562 524 193 0 17 chr2 201375219 201375338 -49312516 + L1MB7 LINE L1 4993 5109 -1037 * 4456 163 21 29 chr2 201375343 201376032 -49311822 + L1MB7 LINE L1 5162 5840 -344 2437 116 91 20 chr2 201376032 201376430 -49311424 + MSTB LTR MaLR 1 426 0 4456 163 21 29 chr2 201376430 201376768 -49311086 + L1MB7 LINE L1 5840 6179 -5 363 273 8 4 chr2 201376943 201377075 -49310779 + MIR SINE MIR 5 187 -75 1164 29 7 22 chr2 201377089 201377228 -49310626 + AluY SINE Alu 2 138 -173 1100 197 19 70 chr2 201377379 201377605 -49310249 - L1M4 LINE L1 -3054 3092 2891 2078 139 0 0 chr2 201377605 201377899 -49309955 + AluJb SINE Alu 1 294 -18 1100 197 19 70 chr2 201377899 201378043 -49309811 - L1M4 LINE L1 -3255 2891 2741 359 292 141 11 chr2 201378138 201378323 -49309531 + L1MC4a LINE L1 5750 5958 -1850 369 301 82 11 chr2 201378647 201378929 -49308925 + L1M2 LINE L1 5254 5555 -745 597 110 76 76 chr2 201378950 201379095 -49308759 - MER104 DNA Tc2 -3 177 33 1765 279 46 52 chr2 201379292 201379486 -49308368 - MER115 DNA AcHobo -1 692 498 1969 159 7 0 chr2 201379486 201379787 -49308067 + AluSx SINE Alu 1 303 -9 1765 279 46 52 chr2 201379787 201380288 -49307566 - MER115 DNA AcHobo -195 498 1 1003 139 36 12 chr2 201380449 201380643 -49307211 + AluSg/x SINE Alu 116 313 0 2015 137 0 3 chr2 201380985 201381277 -49306577 + AluJb SINE Alu 1 291 -21 180 365 28 0 chr2 201381474 201381581 -49306273 + L3b LINE CR1 1108 1217 -366 * 270 254 14 14 chr2 201381579 201381650 -49306204 + MIR3 SINE MIR 123 193 -15 315 287 37 29 chr2 201381753 201381889 -49305965 + L3b LINE CR1 1225 1361 -222 211 274 20 0 chr2 201381993 201382044 -49305810 - MIR3 SINE MIR -33 175 124 216 397 53 0 chr2 201382044 201382175 -49305679 - L3 LINE CR1 -360 1217 1080 274 284 116 0 chr2 201383492 201383587 -49304267 + Charlie1 DNA MER1_type 1457 1562 -1199 1468 113 0 0 chr2 201383833 201384045 -49303809 - MSTA LTR MaLR 0 428 217 261 0 0 0 chr2 201384046 201384075 -49303779 + (GA)n Simple_repeat Simple_repeat 1 29 0 595 115 88 9 chr2 201384076 201384189 -49303665 - MSTA LTR MaLR -303 123 2 37694 57 25 0 chr2 201384493 201389595 -49298259 - L1P LINE L1 -776 5370 142 2286 113 0 0 chr2 201390005 201390298 -49297556 + AluSx SINE Alu 5 297 -15 331 271 188 41 chr2 201390842 201390958 -49296896 + MIR SINE MIR 46 196 -66 3841 132 46 35 chr2 201390958 201391703 -49296151 + L1MA9 LINE L1 5558 6310 -2 331 271 188 41 chr2 201391703 201391756 -49296098 + MIR SINE MIR 196 240 -22 24 0 0 0 chr2 201394173 201394197 -49293657 + AT_rich Low_complexity Low_complexity 1 24 0 1584 178 66 11 chr2 201394202 201394489 -49293365 - AluJo SINE Alu -9 303 1 1108 281 82 12 chr2 201394628 201395095 -49292759 + L1M4 LINE L1 3670 4168 -1978 671 129 69 0 chr2 201395095 201395211 -49292643 + MLT1E2 LTR MaLR 1 124 -502 232 224 102 31 chr2 201395301 201395497 -49292357 + L1M4 LINE L1 4296 4505 -1641 535 237 126 31 chr2 201395513 201395935 -49291919 + L1ME4a LINE L1 4299 4760 -1386 1359 161 77 4 chr2 201395936 201396184 -49291670 + AluJo SINE Alu 29 294 -18 233 257 0 0 chr2 201396184 201396254 -49291600 + L1ME4a LINE L1 4750 4819 -1327 1431 245 50 29 chr2 201396261 201396925 -49290929 + L1ME4a LINE L1 4762 5439 -723 507 215 0 0 chr2 201396927 201397039 -49290815 - MLT1E2 LTR MaLR 0 626 394 2058 121 4 0 chr2 201398298 201398579 -49289275 + AluSq SINE Alu 1 282 -31 591 169 39 19 chr2 201398674 201398828 -49289026 - L1ME4a LINE L1 -1 6120 5964 2256 118 0 3 chr2 201398888 201399193 -49288661 - AluSx SINE Alu -8 304 1 953 169 82 24 chr2 201400130 201400337 -49287517 - MER20 DNA MER1_type 0 219 1 1066 145 0 45 chr2 201400499 201400678 -49287176 + AluJo SINE Alu 121 291 -21 2031 127 28 0 chr2 201400820 201401111 -49286743 + AluJb SINE Alu 1 299 -13 2165 143 0 0 chr2 201401358 201401666 -49286188 + AluSx SINE Alu 1 308 -4 2542 154 14 2 chr2 201401722 201402145 -49285709 + MSTA LTR MaLR 1 428 0 721 194 0 22 chr2 201402299 201402433 -49285421 + FLAM_A SINE Alu 1 131 -2 7138 42 11 0 chr2 201402766 201403884 -49283970 + L1PA6 LINE L1 5020 6148 -6 2275 104 10 0 chr2 201404153 201404450 -49283404 - AluSg SINE Alu -10 300 1 2133 129 0 3 chr2 201404760 201405055 -49282799 + AluSp SINE Alu 1 294 -19 520 53 53 0 chr2 201405425 201405500 -49282354 - AluY SINE Alu -17 294 216 413 239 142 72 chr2 201405773 201406188 -49281666 + L1ME4a LINE L1 5629 6072 -49 202 281 18 0 chr2 201406222 201406279 -49281575 - L2 LINE L2 0 3313 3256 2105 104 28 0 chr2 201407236 201407525 -49280329 + AluSx SINE Alu 3 299 -13 767 137 0 8 chr2 201408395 201408512 -49279342 + FLAM_C SINE Alu 11 126 -17 25 0 0 0 chr2 201409169 201409194 -49278660 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr2 201409373 201409393 -49278461 + (T)n Simple_repeat Simple_repeat 1 20 0 898 196 30 33 chr2 201410899 201411152 -49276702 - LTR37B LTR ERV1 0 468 215 216 0 0 0 chr2 201411152 201411176 -49276678 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 898 196 30 33 chr2 201411176 201411193 -49276661 - LTR37B LTR ERV1 -253 215 199 2315 107 0 0 chr2 201411216 201411516 -49276338 + AluSx SINE Alu 1 300 -12 2148 105 3 52 chr2 201411622 201411946 -49275908 - AluSg SINE Alu -2 308 1 229 193 136 23 chr2 201411946 201412034 -49275820 - LTR37B LTR ERV1 -370 98 1 501 17 0 0 chr2 201412166 201412224 -49275630 + (CA)n Simple_repeat Simple_repeat 1 58 0 214 196 0 18 chr2 201413487 201413543 -49274311 + (TTTG)n Simple_repeat Simple_repeat 3 57 0 1704 147 17 53 chr2 201413549 201413909 -49273945 - L1MC1 LINE L1 -9 6324 5978 1915 156 3 17 chr2 201413941 201414236 -49273618 - AluJb SINE Alu -21 291 1 183 267 0 50 chr2 201414430 201414490 -49273364 - L2 LINE L2 -92 3221 3165 249 218 73 0 chr2 201414579 201414634 -49273220 - MIR3 SINE MIR -15 193 135 475 239 168 30 chr2 201414656 201414995 -49272859 - L1ME4a LINE L1 -19 6102 5717 279 206 0 16 chr2 201415021 201415084 -49272770 - L1ME4a LINE L1 -469 5652 5591 2093 109 14 0 chr2 201415351 201415626 -49272228 + AluSx SINE Alu 20 298 -14 237 320 120 20 chr2 201416266 201416416 -49271438 - L3b LINE CR1 -316 1267 1103 324 0 0 0 chr2 201417800 201417836 -49270018 + (TC)n Simple_repeat Simple_repeat 2 37 0 338 299 32 3 chr2 201418326 201418506 -49269348 + MIR SINE MIR 17 261 -1 303 191 0 0 chr2 201418530 201418598 -49269256 + (CACCAT)n Simple_repeat Simple_repeat 5 72 0 930 292 80 31 chr2 201418598 201419085 -49268769 + L2 LINE L2 2027 2537 -777 189 149 128 21 chr2 201419135 201419182 -49268672 + L2 LINE L2 3262 3313 0 2331 101 0 0 chr2 201419199 201419496 -49268358 + AluY SINE Alu 1 297 -14 293 292 14 62 chr2 201419577 201419721 -49268133 + L2 LINE L2 2598 2734 -580 791 230 43 0 chr2 201420380 201420541 -49267313 + FAM SINE Alu 1 168 -7 848 183 7 0 chr2 201420911 201421053 -49266801 + FLAM_C SINE Alu 1 143 0 242 176 40 40 chr2 201421094 201421168 -49266686 - LTR67 LTR ERVL 0 557 484 2326 56 0 0 chr2 201422627 201422897 -49264957 + L1PA5 LINE L1 5877 6146 -8 1067 136 0 35 chr2 201423497 201423666 -49264188 + FRAM SINE Alu 1 162 -14 297 215 0 46 chr2 201423788 201423853 -49264001 + L2 LINE L2 1876 1937 -1377 1389 226 129 29 chr2 201423853 201423893 -49263961 + L2 LINE L2 1902 1937 -1377 1719 167 13 35 chr2 201423893 201424204 -49263650 + AluJb SINE Alu 1 304 -8 1389 226 129 29 chr2 201424204 201424513 -49263341 + L2 LINE L2 1937 2314 -1000 1912 151 3 3 chr2 201424513 201424805 -49263049 - AluJb SINE Alu -20 292 1 1389 226 129 29 chr2 201424805 201424936 -49262918 + L2 LINE L2 2314 2431 -883 39983 50 21 0 chr2 201425037 201430846 -49257008 + L1HS LINE L1 221 6155 0 243 114 0 0 chr2 201430846 201430890 -49256964 + (A)n Simple_repeat Simple_repeat 1 44 0 7768 38 14 1 chr2 201430890 201431929 -49255925 + L1PA5 LINE L1 5097 6150 -4 2334 204 85 97 chr2 201431945 201432867 -49254987 - L1M4 LINE L1 -1263 4883 3973 21 0 0 0 chr2 201433655 201433676 -49254178 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 201433939 201433969 -49253885 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 201434197 201434221 -49253633 + AT_rich Low_complexity Low_complexity 1 24 0 369 139 63 38 chr2 201434417 201434496 -49253358 - MLT1K LTR MaLR -2 586 506 361 247 11 21 chr2 201434496 201434589 -49253265 + L1MB3 LINE L1 6059 6150 -33 2407 91 0 0 chr2 201434591 201434888 -49252966 + AluSc SINE Alu 1 297 -12 2269 113 3 13 chr2 201434896 201435207 -49252647 + AluSx SINE Alu 1 308 -4 239 280 27 40 chr2 201435787 201435862 -49251992 - L3b LINE CR1 -50 1533 1460 268 279 0 39 chr2 201436111 201436215 -49251639 - MIR3 SINE MIR -8 200 101 288 0 0 0 chr2 201437057 201437089 -49250765 + (TG)n Simple_repeat Simple_repeat 2 33 0 227 292 193 25 chr2 201437797 201437958 -49249896 - MIR SINE MIR -55 207 20 2144 130 7 0 chr2 201438782 201439089 -49248765 + AluSx SINE Alu 1 309 -3 380 314 47 6 chr2 201439304 201439476 -49248378 - L1ME4a LINE L1 0 6121 5943 207 262 16 33 chr2 201439514 201439575 -49248279 - L2 LINE L2 -5 3267 3208 804 272 34 30 chr2 201439575 201439873 -49247981 - L1ME4a LINE L1 -218 5903 5605 187 171 0 24 chr2 201441389 201441430 -49246424 - MIR SINE MIR 0 262 223 * 341 262 126 10 chr2 201441396 201441499 -49246355 - L2 LINE L2 -12 3301 3187 207 0 0 0 chr2 201441882 201441905 -49245949 + (TG)n Simple_repeat Simple_repeat 1 23 0 204 67 0 0 chr2 201441905 201441935 -49245919 + (GA)n Simple_repeat Simple_repeat 2 31 0 494 335 82 4 chr2 201443450 201443683 -49244171 + MIR SINE MIR 2 252 -10 567 236 36 36 chr2 201444355 201444520 -49243334 + MER117 DNA MER1_type 27 191 -6 2421 75 0 25 chr2 201445126 201445445 -49242409 - AluY SINE Alu 0 311 1 1859 90 3 114 chr2 201447220 201447554 -49240300 - AluSg1 SINE Alu -12 297 1 370 286 17 34 chr2 201447614 201447733 -49240121 + L2 LINE L2 3156 3272 0 405 298 184 40 chr2 201447974 201448350 -49239504 + L2 LINE L2 2836 3265 -7 342 307 124 23 chr2 201448363 201448581 -49239273 + MIR SINE MIR 2 241 -21 486 85 0 0 chr2 201448693 201448764 -49239090 + L1PA8A LINE L1 5588 5658 -473 201 267 238 19 chr2 201448769 201448874 -49238980 - MER5B DNA MER1_type -45 133 6 748 301 101 19 chr2 201448879 201449195 -49238659 - L3 LINE CR1 -44 1533 1192 882 188 30 0 chr2 201449202 201449367 -49238487 + Charlie8 DNA MER1_type 2 171 -2246 180 300 54 39 chr2 201449415 201449545 -49238309 - L3 LINE CR1 -349 1228 1097 385 211 226 10 chr2 201449649 201449848 -49238006 - L1ME4a LINE L1 -111 6010 5769 * 3739 153 57 66 chr2 201449841 201450673 -49237181 - L1MB5 LINE L1 0 6174 5351 494 280 55 11 chr2 201450676 201450858 -49236996 - L1ME4a LINE L1 -335 5786 5597 197 316 202 18 chr2 201450908 201451022 -49236832 + MER5B DNA MER1_type 30 164 -14 1956 142 0 16 chr2 201451078 201451387 -49236467 + AluJb SINE Alu 1 304 -8 1503 171 16 0 chr2 201452036 201452288 -49235566 + L1PA16 LINE L1 5911 6166 0 420 250 8 42 chr2 201454014 201454134 -49233720 + L1MC/D LINE L1 5708 5823 -1985 661 209 0 54 chr2 201454211 201454340 -49233514 + FLAM_A SINE Alu 1 122 -11 225 0 0 0 chr2 201455132 201455157 -49232697 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2285 80 7 3 chr2 201455160 201455447 -49232407 - AluSx SINE Alu -24 288 1 427 319 124 24 chr2 201455540 201455838 -49232016 + L2 LINE L2 2611 2938 -376 2045 153 3 0 chr2 201456115 201456423 -49231431 - AluJb SINE Alu -3 309 1 189 305 107 38 chr2 201458514 201458645 -49229209 + L2 LINE L2 2605 2744 -570 1293 185 4 28 chr2 201458674 201458923 -49228931 + AluJo SINE Alu 1 243 -69 231 267 0 13 chr2 201459193 201459268 -49228586 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 21 0 0 0 chr2 201459362 201459383 -49228471 + AT_rich Low_complexity Low_complexity 1 21 0 293 206 0 48 chr2 201459389 201459452 -49228402 + MIR SINE MIR 19 78 -130 252 316 38 45 chr2 201459976 201460036 -49227818 - MIR SINE MIR -14 248 189 2387 48 0 17 chr2 201460036 201460356 -49227498 - AluY SINE Alu 0 311 1 252 316 38 45 chr2 201460356 201460428 -49227426 - MIR SINE MIR -73 189 117 24 0 0 0 chr2 201463441 201463465 -49224389 + AT_rich Low_complexity Low_complexity 1 24 0 228 280 27 0 chr2 201463725 201463800 -49224054 + (TATG)n Simple_repeat Simple_repeat 4 80 0 276 294 73 19 chr2 201465009 201465142 -49222712 + MER5A DNA MER1_type 41 178 0 254 156 22 0 chr2 201465324 201465369 -49222485 - MIR SINE MIR -60 202 157 1108 162 58 5 chr2 201466050 201466241 -49221613 - MLT1B LTR MaLR 0 390 190 446 88 15 0 chr2 201466241 201466309 -49221545 + (GA)n Simple_repeat Simple_repeat 2 70 0 290 200 0 0 chr2 201466310 201466365 -49221489 - MSTC LTR MaLR -197 231 177 * 904 121 66 24 chr2 201466335 201466501 -49221353 - MLT1B LTR MaLR -217 173 1 1928 205 29 46 chr2 201466982 201467193 -49220661 - Charlie4a DNA MER1_type -1454 507 294 1319 148 100 93 chr2 201467193 201467483 -49220371 + AluJb SINE Alu 1 292 -20 1928 205 29 46 chr2 201467483 201467753 -49220101 - Charlie4a DNA MER1_type -1667 294 34 1587 183 17 7 chr2 201467800 201468089 -49219765 + MER58B DNA MER1_type 50 341 0 811 234 37 66 chr2 201469203 201469293 -49218561 - MLT1J1 LTR MaLR -181 265 174 2441 79 7 0 chr2 201469293 201469598 -49218256 - AluSx SINE Alu -5 307 1 811 234 37 66 chr2 201469598 201469780 -49218074 - MLT1J1 LTR MaLR -272 174 1 275 302 181 0 chr2 201469836 201469952 -49217902 - L2 LINE L2 -2 3311 3175 210 71 0 0 chr2 201470160 201470188 -49217666 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1401 185 8 8 chr2 201471111 201471349 -49216505 - MER8 DNA MER2_type -1 238 1 592 272 144 23 chr2 201471940 201472245 -49215609 + L3 LINE CR1 1101 1442 -135 229 179 0 54 chr2 201472571 201472627 -49215227 - L1MC5 LINE L1 -284 7677 7625 539 258 139 10 chr2 201473531 201473725 -49214129 - Charlie8 DNA MER1_type -2198 219 1 398 311 33 17 chr2 201474627 201474868 -49212986 + L1ME4a LINE L1 4624 4868 -1278 974 150 12 25 chr2 201474873 201475033 -49212821 - FRAM SINE Alu -21 155 1 370 248 48 0 chr2 201475059 201475164 -49212690 + L1P LINE L1 4888 4997 -1149 304 242 30 0 chr2 201475300 201475399 -49212455 - L1M LINE L1 -771 5397 5296 1969 145 0 25 chr2 201475451 201475769 -49212085 - AluJo SINE Alu -1 311 2 381 287 182 34 chr2 201475792 201476330 -49211524 + L1ME4a LINE L1 5498 6120 -1 210 37 0 0 chr2 201476345 201476372 -49211482 + (CA)n Simple_repeat Simple_repeat 2 28 0 189 0 0 0 chr2 201477013 201477034 -49210820 + (TTA)n Simple_repeat Simple_repeat 3 23 0 341 232 203 37 chr2 201477447 201477627 -49210227 + MIR SINE MIR 14 227 -35 1261 230 193 0 chr2 201477710 201478088 -49209766 - MLT1J LTR MaLR -58 453 3 512 283 134 19 chr2 201478994 201479263 -49208591 + L2 LINE L2 2975 3274 -39 248 256 83 22 chr2 201479443 201479628 -49208226 - L1ME3A LINE L1 -221 5949 5754 408 71 0 0 chr2 201479727 201479783 -49208071 + L1MB2 LINE L1 6116 6171 0 2221 110 0 0 chr2 201479890 201480202 -49207652 - AluSx SINE Alu 0 314 3 474 245 7 106 chr2 201481004 201481089 -49206765 - L2 LINE L2 -4 3268 3203 1682 152 65 4 chr2 201481089 201481366 -49206488 + AluSx SINE Alu 1 294 -18 474 245 7 106 chr2 201481366 201481431 -49206423 - L2 LINE L2 -69 3203 3133 2200 132 0 3 chr2 201481653 201481964 -49205890 + AluSq SINE Alu 1 310 -3 1747 154 18 33 chr2 201482092 201482423 -49205431 - L1MC1 LINE L1 -18 6315 5990 21 36 0 0 chr2 201482433 201482461 -49205393 + AT_rich Low_complexity Low_complexity 1 28 0 573 259 12 30 chr2 201483564 201483730 -49204124 - MER103 DNA DNA 0 166 4 2016 161 3 0 chr2 201483740 201484050 -49203804 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 201484059 201484080 -49203774 + AT_rich Low_complexity Low_complexity 1 21 0 1280 130 27 0 chr2 201484163 201484347 -49203507 - MER5A DNA MER1_type 0 189 1 774 277 117 99 chr2 201484436 201485342 -49202512 - L2 LINE L2 0 3313 2379 1390 195 165 0 chr2 201485637 201485965 -49201889 - MLT1G LTR MaLR -12 578 197 257 253 165 0 chr2 201486531 201486622 -49201232 + Charlie7 DNA MER1_type 12 117 -2495 197 271 0 21 chr2 201486795 201486843 -49201011 - MER5A DNA MER1_type -1 188 142 698 212 7 26 chr2 201487132 201487283 -49200571 + MIR SINE MIR 1 148 -114 236 326 58 0 chr2 201487525 201487611 -49200243 + L2 LINE L2 3169 3259 -13 207 293 69 17 chr2 201487952 201488010 -49199844 + L2 LINE L2 3134 3194 -78 730 268 13 35 chr2 201488837 201489068 -49198786 - MIR SINE MIR -9 253 28 1706 117 44 0 chr2 201490024 201490272 -49197582 + AluSx SINE Alu 1 259 -53 289 307 143 53 chr2 201491078 201491322 -49196532 - L2 LINE L2 -4 3268 3003 271 330 9 26 chr2 201493137 201493252 -49194602 - 5S rRNA rRNA 0 121 9 444 259 42 35 chr2 201493707 201493850 -49194004 - MIR SINE MIR -100 162 19 250 189 0 0 chr2 201493855 201493908 -49193946 + MER4-int LTR ERV1 1108 1160 -5438 412 206 147 73 chr2 201494048 201494252 -49193602 + MIR SINE MIR 10 228 -34 262 276 0 13 chr2 201494535 201494611 -49193243 - L1ME4a LINE L1 -64 6057 5983 375 60 0 0 chr2 201494927 201494977 -49192877 + (TG)n Simple_repeat Simple_repeat 2 51 0 342 274 26 60 chr2 201495067 201495184 -49192670 + L2 LINE L2 3200 3312 -1 183 277 15 31 chr2 201495186 201495251 -49192603 + MIR SINE MIR 58 121 -141 2385 82 7 10 chr2 201496260 201496565 -49191289 - AluSx SINE Alu -8 304 1 3687 195 119 24 chr2 201496841 201497600 -49190254 - L1ME1 LINE L1 -5 6161 5476 2341 72 7 0 chr2 201497600 201497892 -49189962 - AluY SINE Alu -17 294 1 3687 195 119 24 chr2 201497892 201498477 -49189377 - L1ME1 LINE L1 -690 5476 4696 687 268 37 0 chr2 201498607 201498771 -49189083 + MIR SINE MIR 20 189 -73 621 293 27 70 chr2 201499418 201499478 -49188376 + L1ME LINE L1 5428 5489 -681 2840 13 0 0 chr2 201499478 201499786 -49188068 + AluY SINE Alu 1 308 -3 621 293 27 70 chr2 201499786 201500056 -49187798 + L1ME LINE L1 5489 5744 -426 224 264 0 19 chr2 201500058 201500111 -49187743 + CT-rich Low_complexity Low_complexity 4 55 0 264 167 0 0 chr2 201500653 201500701 -49187153 + CT-rich Low_complexity Low_complexity 2 49 0 1495 137 59 87 chr2 201500703 201501024 -49186830 - AluJo SINE Alu 0 312 1 267 339 37 9 chr2 201502198 201502307 -49185547 + L2 LINE L2 3189 3300 -13 1130 261 89 98 chr2 201502617 201503360 -49184494 - L1MEd LINE L1 -5351 768 33 2476 67 0 3 chr2 201503390 201503689 -49184165 - AluY SINE Alu -13 298 1 203 291 68 13 chr2 201503718 201503828 -49184026 + MIR SINE MIR 29 152 -65 295 179 77 0 chr2 201505814 201505892 -49181962 - MIR SINE MIR -56 206 123 286 303 90 8 chr2 201505956 201506078 -49181776 + MIR SINE MIR 20 151 -111 534 286 130 22 chr2 201506084 201506353 -49181501 + L2 LINE L2 3009 3306 -7 21 0 0 0 chr2 201506508 201506529 -49181325 + AT_rich Low_complexity Low_complexity 1 21 0 226 215 47 47 chr2 201507311 201507418 -49180436 - L1MC4 LINE L1 -1333 6709 6603 217 193 18 83 chr2 201507424 201507533 -49180321 + (TATATG)n Simple_repeat Simple_repeat 4 105 0 2293 92 0 7 chr2 201508620 201508950 -49178904 - AluSc SINE Alu 0 309 1 2085 128 4 0 chr2 201510031 201510312 -49177542 + AluSx SINE Alu 1 282 -30 4057 29 0 0 chr2 201510312 201510757 -49177097 + L1PA3 LINE L1 5708 6152 -3 28 0 0 0 chr2 201510757 201510785 -49177069 + AT_rich Low_complexity Low_complexity 1 28 0 36 23 0 0 chr2 201510921 201510964 -49176890 + AT_rich Low_complexity Low_complexity 1 43 0 910 152 8 0 chr2 201510968 201511100 -49176754 - FLAM_C SINE Alu 0 133 1 770 267 142 15 chr2 201511184 201511514 -49176340 - MARNA DNA Mariner -175 411 40 280 241 80 49 chr2 201512555 201512717 -49175137 + L1ME LINE L1 5296 5462 -2346 189 0 0 0 chr2 201512717 201512738 -49175116 + (TATG)n Simple_repeat Simple_repeat 2 22 0 2235 91 0 3 chr2 201512738 201513023 -49174831 - AluSx SINE Alu -28 284 1 1569 75 0 135 chr2 201513029 201513311 -49174543 - L1MA10 LINE L1 -2 6332 6089 1831 157 11 7 chr2 201513336 201513622 -49174232 + AluJo SINE Alu 1 287 -25 366 333 69 6 chr2 201513646 201513820 -49174034 + L1ME LINE L1 5483 5667 -503 1662 122 0 8 chr2 201513821 201514058 -49173796 + AluSx SINE Alu 47 281 -31 324 0 0 0 chr2 201514058 201514094 -49173760 + (CA)n Simple_repeat Simple_repeat 1 36 0 340 254 18 9 chr2 201514173 201514283 -49173571 - L1MC4 LINE L1 -1 8041 7931 201 108 0 0 chr2 201514283 201514320 -49173534 + (TA)n Simple_repeat Simple_repeat 1 37 0 1266 254 72 22 chr2 201514492 201515048 -49172806 - L1ME3 LINE L1 -229 5935 5354 215 256 279 0 chr2 201516148 201516234 -49171620 + MER5B DNA MER1_type 1 110 -68 407 282 76 76 chr2 201517475 201517766 -49170088 - L2 LINE L2 -12 3260 2970 299 181 191 29 chr2 201518237 201518342 -49169512 + L2 LINE L2 3189 3310 -3 284 289 22 52 chr2 201519175 201519310 -49168544 - L2 LINE L2 -15 3298 3168 2445 84 10 0 chr2 201519690 201520034 -49167820 + AluSp SINE Alu 1 347 0 1670 239 160 14 chr2 201520453 201521021 -49166833 - MLT2F LTR ERVL -12 651 1 2778 7 0 0 chr2 201522457 201522753 -49165101 + AluY SINE Alu 2 297 -14 314 309 134 32 chr2 201522753 201522970 -49164884 - MIR SINE MIR -22 240 2 346 288 118 41 chr2 201523343 201523513 -49164341 - MER5A DNA MER1_type -1 188 6 215 238 25 62 chr2 201523917 201523997 -49163857 - L2 LINE L2 0 3313 3237 2232 101 13 7 chr2 201524513 201524819 -49163035 + AluSx SINE Alu 3 310 -2 751 204 70 39 chr2 201524901 201525131 -49162723 + MER5C DNA MER1_type 88 324 0 5693 99 49 6 chr2 201525148 201526285 -49161569 + L1PA10 LINE L1 4994 6168 0 22 0 0 0 chr2 201526439 201526461 -49161393 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 201526591 201526619 -49161235 + AT_rich Low_complexity Low_complexity 1 28 0 878 191 0 25 chr2 201526947 201527109 -49160745 - FRAM SINE Alu -19 157 1 391 18 179 0 chr2 201527109 201527165 -49160689 - MADE1 DNA Mariner -7 73 8 23 0 0 0 chr2 201528934 201528957 -49158897 + AT_rich Low_complexity Low_complexity 1 23 0 385 291 125 10 chr2 201529276 201529572 -49158282 + L1ME4a LINE L1 5721 6050 -71 1435 131 0 0 chr2 201530280 201530509 -49157345 - AluSg/x SINE Alu 0 313 85 313 221 0 13 chr2 201530621 201530698 -49157156 - MER116 DNA Mariner 0 80 5 260 228 35 0 chr2 201530951 201531008 -49156846 + L2 LINE L2 3247 3305 -8 1807 115 12 0 chr2 201532757 201533010 -49154844 + AluSg1 SINE Alu 42 297 -12 2321 116 0 3 chr2 201533261 201533572 -49154282 - AluSq SINE Alu -3 310 1 447 279 106 89 chr2 201533640 201533988 -49153866 - L2 LINE L2 0 3272 2919 669 185 17 0 chr2 201534394 201534513 -49153341 + FLAM_A SINE Alu 1 121 -12 340 284 133 18 chr2 201534882 201535100 -49152754 + L1MC/D LINE L1 5266 5508 -2534 765 61 0 0 chr2 201535260 201535359 -49152495 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 1974 142 0 7 chr2 201535361 201535649 -49152205 - AluSq SINE Alu -25 288 3 1923 132 13 3 chr2 201535719 201536022 -49151832 - AluJb SINE Alu -5 307 2 998 92 30 0 chr2 201536282 201536413 -49151441 + AluSq/x SINE Alu 1 135 -178 2048 126 13 0 chr2 201536413 201536715 -49151139 + AluSg SINE Alu 1 306 -4 213 94 0 0 chr2 201536715 201536747 -49151107 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 591 311 52 8 chr2 201536763 201537011 -49150843 + MIR SINE MIR 4 262 0 23 0 0 0 chr2 201537890 201537913 -49149941 + AT_rich Low_complexity Low_complexity 1 23 0 2533 58 3 0 chr2 201541212 201541520 -49146334 - AluY SINE Alu -2 309 1 223 301 27 14 chr2 201541521 201541594 -49146260 - MER5A DNA MER1_type -114 75 2 242 160 0 40 chr2 201542150 201542225 -49145629 + T-rich Low_complexity Low_complexity 1 72 0 2251 113 13 0 chr2 201542287 201542587 -49145267 - AluSx SINE Alu -8 304 1 430 193 12 0 chr2 201542881 201542964 -49144890 - AluJ/FRAM SINE Alu -13 299 216 21 0 0 0 chr2 201542977 201542998 -49144856 + AT_rich Low_complexity Low_complexity 1 21 0 2326 92 0 3 chr2 201543674 201543966 -49143888 + AluSx SINE Alu 5 295 -17 1871 146 10 13 chr2 201545053 201545391 -49142463 - AluSx SINE Alu 0 312 1 740 265 78 9 chr2 201545612 201545831 -49142023 - MIR SINE MIR -21 241 8 29 0 0 0 chr2 201547126 201547155 -49140699 + AT_rich Low_complexity Low_complexity 1 29 0 2273 77 0 3 chr2 201547155 201547440 -49140414 - AluY SINE Alu -27 284 1 2002 132 0 10 chr2 201547492 201547788 -49140066 - AluSx SINE Alu -19 293 1 2056 146 3 13 chr2 201548535 201548851 -49139003 + AluSq SINE Alu 1 313 0 934 288 78 30 chr2 201549413 201549529 -49138325 + L1ME4a LINE L1 5528 5637 -484 2078 149 0 0 chr2 201549529 201549824 -49138030 + AluSx SINE Alu 3 297 -15 934 288 78 30 chr2 201549824 201550269 -49137585 + L1ME4a LINE L1 5637 6116 -5 530 152 61 0 chr2 201550367 201550466 -49137388 - L1MB7 LINE L1 -136 6048 5944 2345 93 3 0 chr2 201550700 201551000 -49136854 - AluY SINE Alu -10 301 1 1764 249 46 15 chr2 201551307 201551852 -49136002 + L1MC4a LINE L1 5314 5875 -1933 192 40 0 0 chr2 201551859 201551884 -49135970 + (TTTTTG)n Simple_repeat Simple_repeat 4 28 0 257 222 268 21 chr2 201551884 201552127 -49135727 + L1MC4a LINE L1 5959 6261 -1547 1157 264 49 53 chr2 201552170 201552331 -49135523 + L1MC4 LINE L1 7221 7381 -661 1021 128 6 0 chr2 201552331 201552495 -49135359 - L1MB3 LINE L1 0 6183 6019 1157 264 49 53 chr2 201552495 201553007 -49134847 + L1MC4 LINE L1 7381 7891 -151 2480 87 0 0 chr2 201553483 201553793 -49134061 - AluSg SINE Alu 0 310 1 23 0 0 0 chr2 201554260 201554283 -49133571 + AT_rich Low_complexity Low_complexity 1 23 0 202 316 113 66 chr2 201554765 201554977 -49132877 - L2 LINE L2 -145 3127 2906 394 267 123 20 chr2 201555029 201555224 -49132630 + MIR SINE MIR 14 228 -34 398 170 106 21 chr2 201555249 201555343 -49132511 + MIR SINE MIR 161 262 0 384 329 69 64 chr2 201555920 201556343 -49131511 - L2 LINE L2 -340 2974 2550 183 167 0 0 chr2 201557041 201557083 -49130771 + (TG)n Simple_repeat Simple_repeat 1 42 0 276 290 168 23 chr2 201557634 201557765 -49130089 - L2 LINE L2 0 3313 3164 22 0 0 0 chr2 201558024 201558046 -49129808 + AT_rich Low_complexity Low_complexity 1 22 0 739 276 88 0 chr2 201558097 201558325 -49129529 - MIR SINE MIR 0 262 15 287 260 10 31 chr2 201558894 201558990 -49128864 - L2 LINE L2 -292 2980 2887 381 316 107 30 chr2 201559516 201559750 -49128104 - MIR SINE MIR -7 255 4 220 258 22 11 chr2 201560734 201560823 -49127031 + (TA)n Simple_repeat Simple_repeat 1 90 0 243 61 0 0 chr2 201560823 201560856 -49126998 + (TG)n Simple_repeat Simple_repeat 2 34 0 184 241 69 0 chr2 201562218 201562276 -49125578 + L2 LINE L2 3251 3312 -1 1434 182 0 24 chr2 201562289 201562536 -49125318 + AluJb SINE Alu 1 241 -71 1844 187 137 108 chr2 201562536 201563384 -49124470 - LTR28 LTR ERV1 0 1020 1 457 66 13 40 chr2 201563392 201563468 -49124386 + AluJb SINE Alu 238 311 -1 245 326 34 11 chr2 201563495 201563584 -49124270 + L2 LINE L2 3180 3270 -2 202 139 28 0 chr2 201565445 201565481 -49122373 + T-rich Low_complexity Low_complexity 4 40 0 506 195 19 117 chr2 201566008 201566162 -49121692 + MER69A DNA AcHobo 38 176 -1 21 57 0 0 chr2 201567761 201567796 -49120058 + AT_rich Low_complexity Low_complexity 1 35 0 4269 74 2 0 chr2 201568039 201568592 -49119262 - MER41A LTR ERV1 0 554 1 297 331 7 26 chr2 201569622 201569776 -49118078 + CT-rich Low_complexity Low_complexity 3 153 0 228 67 0 0 chr2 201570004 201570034 -49117820 + (CGG)n Simple_repeat Simple_repeat 2 31 0 1081 133 12 0 chr2 201572837 201573003 -49114851 + AluSg/x SINE Alu 143 310 0 22 70 0 0 chr2 201573409 201573452 -49114402 + AT_rich Low_complexity Low_complexity 1 43 0 2089 117 0 31 chr2 201573664 201573981 -49113873 + AluJb SINE Alu 1 307 -5 462 18 0 0 chr2 201574037 201574092 -49113762 + (TG)n Simple_repeat Simple_repeat 2 56 0 729 292 199 18 chr2 201577308 201577769 -49110085 - L2 LINE L2 -1 3312 2697 400 247 89 7 chr2 201577773 201577919 -49109935 - L1ME3A LINE L1 -7 6163 6006 714 222 61 23 chr2 201578028 201578327 -49109527 - L1ME3A LINE L1 -229 5941 5628 240 319 9 9 chr2 201578364 201578480 -49109374 - L1ME3A LINE L1 -597 5565 5450 3537 166 44 31 chr2 201578546 201579316 -49108538 + L1MB8 LINE L1 5377 6156 -22 24 0 0 0 chr2 201579413 201579437 -49108417 + AT_rich Low_complexity Low_complexity 1 24 0 649 303 15 5 chr2 201579464 201579659 -49108195 - L2 LINE L2 -660 2654 2458 25 0 0 0 chr2 201579836 201579861 -49107993 + AT_rich Low_complexity Low_complexity 1 25 0 411 263 83 39 chr2 201580511 201580716 -49107138 + L1MEc LINE L1 35 248 -6148 2443 251 29 25 chr2 201580939 201581620 -49106234 - L2 LINE L2 -709 2605 1922 1433 131 0 18 chr2 201581621 201581842 -49106012 + AluJo SINE Alu 87 303 -9 1138 228 87 64 chr2 201581843 201581987 -49105867 - L2 LINE L2 -1377 1937 1798 2041 132 4 0 chr2 201581987 201582314 -49105540 - AluSx SINE Alu 0 328 1 1138 228 87 64 chr2 201582314 201582572 -49105282 - L2 LINE L2 -1516 1798 1525 1753 172 54 3 chr2 201582581 201582930 -49104924 - MER68 LTR ERV1 -195 367 1 1050 122 0 0 chr2 201584044 201584192 -49103662 - AluSx SINE Alu -3 309 162 690 170 0 0 chr2 201584192 201584298 -49103556 - AluSx SINE Alu -206 106 1 631 259 64 28 chr2 201584468 201584719 -49103135 - MIR SINE MIR -1 261 2 21 0 0 0 chr2 201585010 201585031 -49102823 + AT_rich Low_complexity Low_complexity 1 21 0 31376 22 0 0 chr2 201585031 201589719 -49098135 - L1HS LINE L1 0 6155 1467 275 313 82 45 chr2 201589912 201590102 -49097752 - MIR3 SINE MIR -12 196 12 217 179 0 89 chr2 201590104 201590160 -49097694 - L2 LINE L2 -89 3224 3174 755 211 0 0 chr2 201590756 201590898 -49096956 + MER46A DNA MER2_type 1 142 -94 336 157 0 0 chr2 201590898 201590949 -49096905 + MER46A DNA MER2_type 186 236 0 628 234 48 103 chr2 201591981 201592233 -49095621 + MER112 DNA MER1_type 17 254 -6 276 253 12 72 chr2 201592329 201592412 -49095442 - L2 LINE L2 -10 3262 3185 280 254 68 0 chr2 201593625 201593684 -49094170 + L2 LINE L2 3250 3312 -1 258 32 0 0 chr2 201595607 201595638 -49092216 + (CA)n Simple_repeat Simple_repeat 2 32 0 354 45 0 0 chr2 201596272 201596316 -49091538 + (TG)n Simple_repeat Simple_repeat 1 44 0 5240 115 1 1 chr2 201597293 201598090 -49089764 + L1PA13 LINE L1 5348 6144 -19 21 36 0 0 chr2 201599337 201599365 -49088489 + AT_rich Low_complexity Low_complexity 1 28 0 1804 157 0 33 chr2 201599826 201600125 -49087729 + AluJo SINE Alu 1 289 -23 597 126 34 0 chr2 201602463 201602582 -49085272 + CT-rich Low_complexity Low_complexity 4 126 0 5055 233 61 28 chr2 201602710 201604557 -49083297 + L1M4 LINE L1 2444 4352 -1794 1718 257 131 18 chr2 201604722 201605552 -49082302 + L2 LINE L2 2397 3313 0 286 263 0 0 chr2 201605701 201605777 -49082077 - L1ME LINE L1 -553 5568 5493 604 342 67 12 chr2 201605780 201606122 -49081732 + L2 LINE L2 2871 3231 -82 463 248 62 8 chr2 201606630 201606759 -49081095 + MIR SINE MIR 14 149 -113 189 302 0 48 chr2 201608327 201608390 -49079464 + MIR3 SINE MIR 124 183 -25 536 281 39 0 chr2 201608413 201608566 -49079288 + MIR SINE MIR 82 240 -22 963 253 157 47 chr2 201608623 201608859 -49078995 - L2 LINE L2 0 3313 3104 729 211 0 0 chr2 201608859 201608987 -49078867 - FLAM_A SINE Alu -5 128 1 963 253 157 47 chr2 201608987 201609432 -49078422 - L2 LINE L2 -209 3104 2565 6548 65 2 3 chr2 201610047 201610905 -49076949 + L1PA6 LINE L1 5297 6153 -1 23 33 0 0 chr2 201610909 201610939 -49076915 + AT_rich Low_complexity Low_complexity 1 30 0 1423 110 46 5 chr2 201611080 201611298 -49076556 - MER30 DNA MER1_type -3 227 1 2211 106 0 57 chr2 201611589 201611920 -49075934 + AluSx SINE Alu 1 312 0 245 239 0 15 chr2 201611949 201612016 -49075838 + L1MC5 LINE L1 7845 7910 -51 625 272 71 13 chr2 201612095 201612319 -49075535 + MIR SINE MIR 23 259 -3 479 264 224 25 chr2 201612700 201612901 -49074953 + MIR SINE MIR 19 259 -3 796 213 107 175 chr2 201612954 201614121 -49073733 - L2 LINE L2 0 3313 2221 519 287 145 10 chr2 201614516 201614819 -49073035 - L1MC/D LINE L1 -2211 5597 5254 402 320 0 0 chr2 201615942 201616092 -49071762 + (CCA)n Simple_repeat Simple_repeat 1 150 0 2120 120 13 0 chr2 201616898 201617197 -49070657 - AluSx SINE Alu -8 304 2 467 295 86 0 chr2 201617337 201617511 -49070343 - MIR SINE MIR -22 240 53 2328 98 0 0 chr2 201619929 201620226 -49067628 + AluSx SINE Alu 1 297 -15 216 0 0 0 chr2 201620269 201620293 -49067561 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 344 271 8 38 chr2 201621571 201621704 -49066150 + CT-rich Low_complexity Low_complexity 3 131 0 1972 136 25 0 chr2 201622030 201622309 -49065545 + AluSx SINE Alu 1 286 -26 2186 98 3 0 chr2 201622317 201622602 -49065252 + AluSx SINE Alu 11 296 -16 8437 60 100 18 chr2 201623619 201624921 -49062933 - L1P LINE L1 -4738 1408 1 1612 276 102 35 chr2 201625585 201625764 -49062090 + MER115 DNA AcHobo 2 168 -525 2307 62 35 0 chr2 201625764 201626053 -49061801 - AluSc SINE Alu -10 299 1 1612 276 102 35 chr2 201626053 201626522 -49061332 + MER115 DNA AcHobo 168 693 0 2221 81 0 0 chr2 201626918 201627190 -49060664 - AluSg SINE Alu 0 310 39 484 102 24 118 chr2 201627249 201627376 -49060478 - L1MA10 LINE L1 0 6334 6220 198 103 0 0 chr2 201628063 201628092 -49059762 + (GA)n Simple_repeat Simple_repeat 2 30 0 243 0 0 0 chr2 201628093 201628120 -49059734 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 1571 179 6 63 chr2 201628179 201628497 -49059357 + AluJo SINE Alu 1 300 -12 2416 72 3 7 chr2 201629567 201629872 -49057982 - AluY SINE Alu -7 304 1 692 258 129 56 chr2 201630164 201630456 -49057398 - MLT1J1 LTR MaLR -21 425 94 2148 88 0 14 chr2 201630456 201630761 -49057093 - AluSq SINE Alu 0 304 4 692 258 129 56 chr2 201630761 201630863 -49056991 - MLT1J1 LTR MaLR -352 94 1 2063 128 3 3 chr2 201632285 201632581 -49055273 - AluSx SINE Alu -16 296 1 2031 121 59 0 chr2 201633665 201633955 -49053899 - AluSx SINE Alu -5 307 1 596 160 0 0 chr2 201634054 201634148 -49053706 - FLAM_A SINE Alu -13 129 36 2498 77 0 0 chr2 201635687 201635998 -49051856 - AluY SINE Alu 0 311 1 758 331 155 23 chr2 201636036 201636507 -49051347 + L3 LINE CR1 943 1475 -102 266 235 51 61 chr2 201636515 201636613 -49051241 + MIR SINE MIR 30 126 -82 975 208 79 0 chr2 201636952 201637192 -49050662 + MIR SINE MIR 1 259 -3 22 35 0 0 chr2 201637495 201637524 -49050330 + AT_rich Low_complexity Low_complexity 1 29 0 2274 221 80 82 chr2 201638205 201639491 -49048363 - L1MC5 LINE L1 -215 7746 6476 1783 166 7 10 chr2 201640284 201640580 -49047274 + AluJb SINE Alu 1 295 -17 2550 48 0 10 chr2 201640633 201640944 -49046910 - AluY SINE Alu -3 308 1 1314 247 86 27 chr2 201641469 201642096 -49045758 - L1MC5 LINE L1 -30 7931 7268 347 310 18 26 chr2 201642803 201642916 -49044938 + L2 LINE L2 3156 3267 -5 1860 92 4 0 chr2 201643092 201643382 -49044472 - AluY SINE Alu 0 324 34 2041 87 0 0 chr2 201643555 201643809 -49044045 + AluSc SINE Alu 35 288 -21 2412 92 0 0 chr2 201644056 201644360 -49043494 + AluSx SINE Alu 1 304 -8 340 109 0 16 chr2 201646255 201646319 -49041535 - L1PB3 LINE L1 0 6154 6092 21 36 0 0 chr2 201646428 201646456 -49041398 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 201646766 201646794 -49041060 + AT_rich Low_complexity Low_complexity 1 28 0 8633 154 9 2 chr2 201647363 201649647 -49038207 + L1PA13 LINE L1 3853 6155 -8 23 33 0 0 chr2 201650068 201650098 -49037756 + AT_rich Low_complexity Low_complexity 1 30 0 2212 124 0 0 chr2 201650805 201651104 -49036750 - AluSx SINE Alu -13 299 1 896 209 0 0 chr2 201651283 201651431 -49036423 + FAM SINE Alu 5 152 -33 192 77 0 0 chr2 201651436 201651462 -49036392 + (TAAAA)n Simple_repeat Simple_repeat 1 26 0 569 210 98 7 chr2 201651516 201651659 -49036195 - MER3 DNA MER1_type -4 205 50 238 162 0 0 chr2 201652021 201652058 -49035796 - tRNA-Asp-GAC tRNA tRNA -38 37 1 1787 138 47 0 chr2 201652064 201652362 -49035492 + MER46B DNA MER2_type 50 236 0 195 328 51 51 chr2 201652540 201652735 -49035119 + L2 LINE L2 3113 3307 -6 629 277 137 20 chr2 201655227 201655628 -49032226 - L1ME4a LINE L1 -5 6116 5669 1704 147 28 11 chr2 201655644 201655929 -49031925 - AluJb SINE Alu -18 294 5 313 315 63 14 chr2 201656085 201656228 -49031626 - MIR SINE MIR -24 238 89 2276 86 0 10 chr2 201656293 201656594 -49031260 - AluY SINE Alu -13 298 1 25 0 0 0 chr2 201657679 201657704 -49030150 + AT_rich Low_complexity Low_complexity 1 25 0 613 292 100 44 chr2 201657805 201658307 -49029547 - L1ME3 LINE L1 -325 5837 5297 282 268 73 0 chr2 201658490 201658572 -49029282 - L2 LINE L2 -9 3304 3217 1807 132 30 34 chr2 201659434 201659730 -49028124 - AluSx SINE Alu -17 295 1 342 244 16 65 chr2 201660169 201660292 -49027562 - MIR SINE MIR -87 175 59 214 296 173 0 chr2 201660366 201660447 -49027407 - L2 LINE L2 0 3313 3219 2048 100 0 0 chr2 201661690 201661961 -49025893 - AluSg SINE Alu -3 307 37 1141 260 72 16 chr2 201662592 201662862 -49024992 - L1MC4a LINE L1 -1837 5971 5670 2257 92 0 0 chr2 201662862 201663191 -49024663 + AluY SINE Alu 1 329 0 1141 260 72 16 chr2 201663191 201663307 -49024547 - L1MC4a LINE L1 -2138 5670 5562 21 0 0 0 chr2 201663340 201663361 -49024493 + AT_rich Low_complexity Low_complexity 1 21 0 2313 99 3 0 chr2 201665006 201665308 -49022546 + AluSp SINE Alu 1 303 -10 35 41 0 0 chr2 201665308 201665357 -49022497 + AT_rich Low_complexity Low_complexity 1 49 0 519 297 85 28 chr2 201665429 201665531 -49022323 - L1ME LINE L1 -303 5818 5723 922 162 192 0 chr2 201665531 201665729 -49022125 - MER46A DNA MER2_type 0 236 1 519 297 85 28 chr2 201665729 201665829 -49022025 - L1ME LINE L1 -398 5723 5630 2332 92 3 3 chr2 201665829 201666132 -49021722 - AluSg SINE Alu -7 303 1 519 297 85 28 chr2 201666132 201666211 -49021643 - L1ME LINE L1 -491 5630 5520 485 261 176 0 chr2 201666479 201666632 -49021222 - MER5A DNA MER1_type 0 189 10 332 170 170 57 chr2 201667419 201667525 -49020329 - L2 LINE L2 -2 3270 3153 2127 110 0 43 chr2 201667932 201668259 -49019595 + AluSq SINE Alu 1 313 0 2081 133 0 10 chr2 201668269 201668569 -49019285 + AluJb SINE Alu 1 297 -15 1437 165 13 50 chr2 201670863 201671166 -49016688 + AluJo SINE Alu 1 292 -20 201 195 0 0 chr2 201673204 201673245 -49014609 + (TG)n Simple_repeat Simple_repeat 2 42 0 240 111 0 0 chr2 201674758 201674794 -49013060 + (TC)n Simple_repeat Simple_repeat 1 36 0 291 93 0 0 chr2 201676318 201676361 -49011493 + (TTTTG)n Simple_repeat Simple_repeat 4 46 0 1140 153 11 0 chr2 201676361 201676538 -49011316 - AluJb SINE Alu -51 261 83 193 248 158 59 chr2 201677030 201677131 -49010723 - MIR3 SINE MIR -1 207 97 1803 231 120 28 chr2 201677370 201677912 -49009942 - MLT1E LTR MaLR 0 593 2 1156 274 66 53 chr2 201679220 201679547 -49008307 - L2 LINE L2 -283 3030 2694 3222 58 2 2 chr2 201679547 201679958 -49007896 - L1PA8 LINE L1 0 6172 5762 1156 274 66 53 chr2 201679958 201680160 -49007694 - L2 LINE L2 -619 2694 2496 892 216 161 69 chr2 201680223 201680625 -49007229 + MER65B LTR ERV1 1 515 -16 189 0 0 0 chr2 201680625 201680646 -49007208 + (TA)n Simple_repeat Simple_repeat 1 21 0 892 216 161 69 chr2 201680646 201680665 -49007189 + MER65B LTR ERV1 515 531 0 693 239 77 39 chr2 201680688 201680948 -49006906 - L2 LINE L2 -1150 2164 1895 2056 138 3 13 chr2 201680950 201681261 -49006593 - AluSp SINE Alu -5 308 1 1156 304 111 16 chr2 201681262 201681821 -49006033 - L2 LINE L2 -2016 1298 687 2493 78 7 0 chr2 201682893 201683200 -49004654 + AluSp SINE Alu 1 309 -4 957 187 130 35 chr2 201684632 201685154 -49002700 + Charlie1a DNA MER1_type 7 606 -849 901 134 6 6 chr2 201685149 201685313 -49002541 + Charlie1a DNA MER1_type 1292 1455 0 * 449 181 104 114 chr2 201685375 201685443 -49002411 - MER3 DNA MER1_type 0 209 142 1518 69 0 23 chr2 201685443 201685659 -49002195 - L1MA3 LINE L1 0 6305 6095 449 181 104 114 chr2 201685659 201685783 -49002071 - MER3 DNA MER1_type -67 142 19 499 127 55 11 chr2 201686331 201686454 -49001400 - L1MC3 LINE L1 0 8042 7675 683 257 67 57 chr2 201687625 201687956 -48999898 + MLT1I LTR MaLR 72 405 -4 260 305 0 0 chr2 201687959 201688041 -48999813 + (TATATG)n Simple_repeat Simple_repeat 3 84 0 257 252 48 10 chr2 201688076 201688179 -48999675 - L1ME LINE L1 -229 5892 5786 * 433 243 52 54 chr2 201688158 201688383 -48999471 - L1ME LINE L1 -304 5817 5624 252 343 110 41 chr2 201688854 201689000 -48998854 + L2 LINE L2 3100 3255 -17 834 264 66 81 chr2 201689407 201689741 -48998113 + L1MC/D LINE L1 5489 5817 -1968 2107 144 0 0 chr2 201689879 201690178 -48997676 - AluSx SINE Alu -13 299 1 33 25 0 0 chr2 201690251 201690291 -48997563 + AT_rich Low_complexity Low_complexity 1 40 0 2140 119 143 13 chr2 201692126 201692505 -48995349 + MSTA LTR MaLR 1 428 0 1350 165 103 8 chr2 201693218 201693479 -48994375 + AluJo SINE Alu 1 286 -26 245 204 29 19 chr2 201693479 201693582 -48994272 + (TA)n Simple_repeat Simple_repeat 1 104 0 388 156 164 90 chr2 201693749 201693782 -48994072 - MER4A LTR ERV1 -137 527 498 240 59 0 0 chr2 201693782 201693816 -48994038 + (TA)n Simple_repeat Simple_repeat 2 35 0 388 156 164 90 chr2 201693816 201693904 -48993950 - MER4A LTR ERV1 -166 498 397 2208 105 0 0 chr2 201694277 201694562 -48993292 + AluSx SINE Alu 1 285 -27 655 111 8 26 chr2 201694597 201694714 -48993140 - L1MB7 LINE L1 -30 6154 6040 742 77 0 10 chr2 201694714 201694818 -48993036 - MER4B LTR ERV1 0 610 508 296 122 0 0 chr2 201694818 201694867 -48992987 + LTR8 LTR ERV1 1 49 -642 1057 108 0 0 chr2 201694867 201695015 -48992839 + LTR8 LTR ERV1 544 691 0 2789 91 53 100 chr2 201695015 201695476 -48992378 - MER4A LTR ERV1 -98 566 134 473 128 26 0 chr2 201695476 201695554 -48992300 - MADE1 DNA Mariner 0 80 1 2789 91 53 100 chr2 201695554 201695654 -48992200 - MER4A LTR ERV1 -530 134 31 1584 171 34 12 chr2 201695660 201695981 -48991873 - L1MB8 LINE L1 -127 6051 5724 288 374 20 24 chr2 201695988 201696237 -48991617 + L2 LINE L2 2453 2700 -614 2341 192 29 73 chr2 201696603 201697232 -48990622 + LTR9 LTR ERV1 1 601 -11 26 30 0 0 chr2 201697244 201697277 -48990577 + AT_rich Low_complexity Low_complexity 1 33 0 432 283 6 23 chr2 201697277 201697454 -48990400 + L1 LINE L1 3804 3977 -2169 2262 104 30 0 chr2 201697495 201697793 -48990061 - AluSx SINE Alu -5 307 1 973 176 71 19 chr2 201697896 201698106 -48989748 - AluJb SINE Alu -7 305 85 380 344 33 19 chr2 201698106 201698198 -48989656 + L1 LINE L1 4153 4242 -1904 1603 168 65 14 chr2 201698198 201698490 -48989364 + AluJb SINE Alu 1 307 -5 380 344 33 19 chr2 201698490 201698609 -48989245 + L1 LINE L1 4242 4367 -1779 291 290 166 93 chr2 201700831 201701090 -48986764 - L2 LINE L2 0 3272 2995 2389 101 0 0 chr2 201701090 201701398 -48986456 + AluSq SINE Alu 1 308 -5 879 144 6 6 chr2 201701504 201701685 -48986169 - L1MA7 LINE L1 0 6291 6111 344 328 80 32 chr2 201701911 201702222 -48985632 + LTR16C LTR ERVL 138 463 -28 1954 146 40 3 chr2 201702458 201702759 -48985095 + AluJo SINE Alu 1 312 0 1015 277 88 29 chr2 201702934 201703523 -48984331 - L1ME3A LINE L1 -219 6020 5397 * 1182 245 68 96 chr2 201703511 201704503 -48983351 - L1ME3A LINE L1 -1604 4611 3648 305 240 116 31 chr2 201704511 201704640 -48983214 - L1ME3A LINE L1 -3527 2688 2549 351 332 19 0 chr2 201704707 201704915 -48982939 - L1M4 LINE L1 -2583 3563 3352 4919 46 14 41 chr2 201705026 201705683 -48982171 + L1PA6 LINE L1 5514 6152 -2 2307 87 0 0 chr2 201705691 201706004 -48981850 - AluSg SINE Alu 0 313 1 399 143 11 33 chr2 201706004 201706095 -48981759 - L1MA10 LINE L1 -8 6326 6238 586 381 44 86 chr2 201706124 201706623 -48981231 - L1ME3A LINE L1 -5793 603 126 189 74 0 0 chr2 201706623 201706650 -48981204 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 428 246 86 4 chr2 201706801 201707033 -48980821 - L1M4 LINE L1 -3108 3038 2788 483 230 34 2 chr2 201707051 201707195 -48980659 - L1MA10 LINE L1 -14 6311 6005 642 266 167 50 chr2 201707242 201707786 -48980068 - MLT1L LTR MaLR -7 608 1 694 252 97 15 chr2 201708647 201708853 -48979001 - MIR SINE MIR -27 235 13 21 0 0 0 chr2 201708889 201708910 -48978944 + AT_rich Low_complexity Low_complexity 1 21 0 887 213 11 27 chr2 201709028 201709211 -48978643 + MER5A DNA MER1_type 4 183 -6 223 284 0 34 chr2 201709453 201709541 -48978313 + CT-rich Low_complexity Low_complexity 4 88 0 2194 112 46 5 chr2 201709894 201710261 -48977593 - L1MB3 LINE L1 -8 6175 5794 180 0 0 0 chr2 201710261 201710281 -48977573 + (TG)n Simple_repeat Simple_repeat 1 20 0 724 102 9 0 chr2 201710353 201710461 -48977393 - L1MB3 LINE L1 -403 5780 5672 2460 60 0 7 chr2 201710474 201710773 -48977081 - AluY SINE Alu -14 297 1 466 287 139 0 chr2 201712197 201712381 -48975473 - MIR SINE MIR -15 247 39 1139 215 9 5 chr2 201713246 201713469 -48974385 + MER58A DNA MER1_type 1 224 0 2516 59 7 0 chr2 201714015 201714322 -48973532 + AluY SINE Alu 1 309 -2 2213 120 0 10 chr2 201714835 201715134 -48972720 - AluSq SINE Alu -17 296 1 215 205 0 0 chr2 201715691 201715730 -48972124 - L2 LINE L2 -12 3301 3263 486 248 58 29 chr2 201716210 201716347 -48971507 - MIR3 SINE MIR -36 172 32 23 33 0 0 chr2 201716373 201716403 -48971451 + AT_rich Low_complexity Low_complexity 1 30 0 456 301 53 26 chr2 201716788 201717074 -48970780 + L1MDa LINE L1 1703 2096 -805 1143 134 0 48 chr2 201717392 201717578 -48970276 + AluJb SINE Alu 5 181 -131 988 194 0 0 chr2 201717716 201717895 -48969959 + AluJb SINE Alu 129 307 0 248 262 182 11 chr2 201717989 201718176 -48969678 - L1ME4a LINE L1 -30 6091 5873 1410 170 114 34 chr2 201718540 201718898 -48968956 - MSTD LTR MaLR -6 390 4 333 0 0 0 chr2 201718898 201718935 -48968919 + (CA)n Simple_repeat Simple_repeat 2 38 0 377 239 18 9 chr2 201719030 201719143 -48968711 - L1MC4a LINE L1 -1876 5932 5819 235 172 207 0 chr2 201719703 201719761 -48968093 + MLT1K LTR MaLR 514 583 -5 469 297 157 19 chr2 201719840 201720268 -48967586 - L2 LINE L2 -1199 2115 1629 287 228 0 0 chr2 201720387 201720444 -48967410 - MIR SINE MIR -21 241 185 2177 93 3 14 chr2 201720664 201720955 -48966899 - AluSx SINE Alu -24 288 1 218 365 56 28 chr2 201720980 201721229 -48966625 - L2 LINE L2 -2115 1199 944 739 222 99 6 chr2 201721395 201721501 -48966353 + MER5A DNA MER1_type 3 132 -57 2223 112 7 3 chr2 201721501 201721805 -48966049 - AluSg SINE Alu -5 305 1 739 222 99 6 chr2 201721805 201721869 -48965985 + MER5A DNA MER1_type 132 189 0 1200 167 48 12 chr2 201723474 201723725 -48964129 - MLT1A1 LTR MaLR 0 365 106 1130 177 91 110 chr2 201723767 201723832 -48964022 - MLT1A1 LTR MaLR 0 365 300 2413 86 3 0 chr2 201723832 201724134 -48963720 + AluSg SINE Alu 1 303 -7 1130 177 91 110 chr2 201724134 201724440 -48963414 - MLT1A1 LTR MaLR -65 300 1 954 171 45 20 chr2 201724467 201724666 -48963188 + AluJb SINE Alu 1 204 -108 23 33 0 0 chr2 201724732 201724762 -48963092 + GC_rich Low_complexity Low_complexity 1 30 0 309 266 65 58 chr2 201725246 201725305 -48962549 - MER5B DNA MER1_type -2 187 130 2126 84 0 0 chr2 201725305 201725566 -48962288 + AluY SINE Alu 37 297 -14 309 266 65 58 chr2 201725566 201725689 -48962165 - MER5B DNA MER1_type -59 130 4 910 188 108 8 chr2 201725700 201725940 -48961914 - MER20B DNA MER1_type 0 783 520 1127 254 90 35 chr2 201726049 201726183 -48961671 - MER20B DNA MER1_type -277 506 381 2291 105 3 6 chr2 201726183 201726497 -48961357 - AluSq SINE Alu 0 313 1 1127 254 90 35 chr2 201726497 201726842 -48961012 - MER20B DNA MER1_type -402 381 1 1689 147 0 77 chr2 201727040 201727076 -48960778 - AluJo SINE Alu -10 302 265 1954 160 0 19 chr2 201727076 201727388 -48960466 + AluJb SINE Alu 3 308 -4 1689 147 0 77 chr2 201727388 201727678 -48960176 - AluJo SINE Alu -47 265 1 633 270 155 9 chr2 201727767 201728108 -48959746 - LTR16A LTR ERVL 0 450 60 494 242 4 36 chr2 201728176 201728333 -48959521 - MIR SINE MIR -63 145 30 225 0 0 0 chr2 201728461 201728486 -48959368 + (TA)n Simple_repeat Simple_repeat 1 25 0 195 100 0 0 chr2 201728487 201728517 -48959337 + (A)n Simple_repeat Simple_repeat 1 30 0 372 243 93 47 chr2 201728517 201728873 -48958981 + L1M4 LINE L1 2896 3307 -2839 584 299 89 11 chr2 201728985 201729256 -48958598 + MLT1J2 LTR MaLR 155 446 -4 824 262 69 9 chr2 201730052 201730285 -48957569 + MIR SINE MIR 6 252 -10 326 212 42 76 chr2 201730465 201730583 -48957271 + L1ME4a LINE L1 5949 6062 -59 2102 118 4 0 chr2 201730856 201731136 -48956718 - AluSq SINE Alu -32 281 1 557 252 18 5 chr2 201731655 201731821 -48956033 - MIR SINE MIR -6 256 89 360 248 42 54 chr2 201732013 201732211 -48955643 - MIR3 SINE MIR -55 207 15 549 242 16 16 chr2 201733049 201733173 -48954681 + MIR3 SINE MIR 37 160 -48 371 245 0 167 chr2 201733174 201733218 -48954636 - MER5B DNA MER1_type -1 177 127 2072 104 10 7 chr2 201733218 201733506 -48954348 - AluSc SINE Alu -20 289 1 371 245 0 167 chr2 201733506 201733653 -48954201 - MER5B DNA MER1_type -51 127 18 2253 120 0 0 chr2 201734246 201734554 -48953300 + AluSx SINE Alu 1 308 -4 768 264 62 102 chr2 201736037 201736706 -48951148 + L1ME3A LINE L1 5450 6081 -89 2138 123 0 0 chr2 201736777 201737102 -48950752 + AluSx SINE Alu 1 325 0 1762 169 3 33 chr2 201738667 201738969 -48948885 + AluJo SINE Alu 1 293 -19 1129 193 33 5 chr2 201739071 201739284 -48948570 + MER20 DNA MER1_type 1 219 0 185 244 22 0 chr2 201739332 201739377 -48948477 - L2 LINE L2 -5 3267 3222 33 0 0 0 chr2 201740925 201740958 -48946896 + AT_rich Low_complexity Low_complexity 1 33 0 653 207 0 25 chr2 201741067 201741188 -48946666 - FLAM_A SINE Alu -19 123 6 808 128 71 7 chr2 201741416 201741557 -48946297 + L1MB1 LINE L1 6017 6166 -2 1848 145 14 7 chr2 201741721 201742017 -48945837 - AluJb SINE Alu -14 298 1 304 333 129 0 chr2 201742029 201742239 -48945615 - L1MC4a LINE L1 -1861 5947 5711 240 65 0 0 chr2 201742349 201742380 -48945474 + tRNA-Arg-AGG tRNA tRNA 1 31 -45 2275 104 3 0 chr2 201742859 201743158 -48944696 + AluSx SINE Alu 1 300 -12 214 71 24 24 chr2 201743221 201743263 -48944591 + (CAATA)n Simple_repeat Simple_repeat 2 43 0 265 254 0 0 chr2 201744238 201744293 -48943561 + GA-rich Low_complexity Low_complexity 2 56 0 766 279 34 98 chr2 201745416 201745825 -48942029 + L2 LINE L2 2889 3271 -1 1077 208 131 89 chr2 201746068 201746228 -48941626 - MLT1J LTR MaLR -10 501 349 2030 112 0 65 chr2 201746228 201746551 -48941303 - AluSx SINE Alu -10 302 1 1077 208 131 89 chr2 201746551 201746781 -48941073 - MLT1J LTR MaLR -162 349 85 1606 156 65 0 chr2 201746781 201747057 -48940797 - AluJb SINE Alu -18 294 1 1077 208 131 89 chr2 201747057 201747146 -48940708 - MLT1J LTR MaLR -426 85 1 2070 124 0 0 chr2 201747635 201747918 -48939936 + AluSx SINE Alu 18 300 -12 575 182 27 9 chr2 201748808 201748918 -48938936 + MER103 DNA DNA 10 121 -45 21 82 0 0 chr2 201749141 201749190 -48938664 + AT_rich Low_complexity Low_complexity 1 49 0 203 254 164 18 chr2 201749609 201749719 -48938135 - L2 LINE L2 0 3313 3188 23 54 0 0 chr2 201749795 201749832 -48938022 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr2 201750828 201750852 -48937002 + AT_rich Low_complexity Low_complexity 1 24 0 2217 141 13 48 chr2 201751062 201751438 -48936416 - MLT1A1 LTR MaLR 0 365 1 450 135 11 90 chr2 201752408 201752497 -48935357 - MER2 DNA MER2_type 0 345 264 1812 150 44 0 chr2 201752518 201752811 -48935043 + AluSg SINE Alu 1 306 -4 1358 136 5 0 chr2 201752812 201753011 -48934843 - MER2 DNA MER2_type -140 205 6 1738 163 3 28 chr2 201753699 201754019 -48933835 - AluJo SINE Alu 0 312 1 850 258 9 26 chr2 201754245 201754474 -48933380 - MIR SINE MIR -37 225 1 274 263 183 7 chr2 201755135 201755272 -48932582 - MIR SINE MIR -70 192 32 1081 240 45 43 chr2 201755714 201756010 -48931844 + MLT2D LTR ERVL 92 491 -29 245 210 16 0 chr2 201756055 201756117 -48931737 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 287 146 0 0 chr2 201756162 201756210 -48931644 + MLT2D LTR ERVL 473 520 0 1837 155 7 16 chr2 201756516 201756826 -48931028 + AluJo SINE Alu 1 307 -5 1256 221 111 74 chr2 201757518 201758070 -48929784 - MLT1L LTR MaLR -2 613 42 844 246 68 5 chr2 201758111 201758331 -48929523 - MIR SINE MIR 0 262 29 32 57 0 0 chr2 201758563 201758616 -48929238 + AT_rich Low_complexity Low_complexity 1 53 0 637 332 104 20 chr2 201758790 201759194 -48928660 - L1ME LINE L1 -363 5758 5321 189 0 0 0 chr2 201759854 201759875 -48927979 + (CCCCG)n Simple_repeat Simple_repeat 2 22 0 2033 50 8 19 chr2 201759931 201760189 -48927665 - AluY SINE Alu -13 298 44 2051 109 31 3 chr2 201761641 201761934 -48925920 + AluSx SINE Alu 6 306 -6 357 82 0 0 chr2 201762109 201762158 -48925696 + (CA)n Simple_repeat Simple_repeat 2 50 0 259 212 0 30 chr2 201762251 201762317 -48925537 - L1MC4 LINE L1 -1340 6702 6639 272 307 126 50 chr2 201763673 201763911 -48923943 + L3 LINE CR1 1305 1560 -17 4264 141 21 62 chr2 201765053 201765086 -48922768 - L1MB3 LINE L1 -2 6181 6148 1406 58 17 0 chr2 201765086 201765260 -48922594 + L1MA1 LINE L1 6126 6302 0 4264 141 21 62 chr2 201765260 201765597 -48922257 - L1MB3 LINE L1 -35 6148 5798 1647 115 14 82 chr2 201765597 201765920 -48921934 - AluSx SINE Alu 0 328 25 4264 141 21 62 chr2 201765920 201766363 -48921491 - L1MB3 LINE L1 -385 5798 5400 253 297 14 0 chr2 201767164 201767238 -48920616 - L2 LINE L2 -11 3261 3187 7917 29 9 0 chr2 201767608 201768988 -48918866 - L1PA4 LINE L1 -3 6152 4765 21 0 0 0 chr2 201769777 201769798 -48918056 + AT_rich Low_complexity Low_complexity 1 21 0 1987 141 0 16 chr2 201770143 201770455 -48917399 + AluSx SINE Alu 1 307 -5 942 269 104 67 chr2 201771292 201771500 -48916354 + MLT1J LTR MaLR 1 200 -311 791 181 0 43 chr2 201771500 201771638 -48916216 + FLAM_A SINE Alu 1 132 -1 942 269 104 67 chr2 201771638 201771860 -48915994 + MLT1J LTR MaLR 200 447 -64 2122 109 6 47 chr2 201772751 201773072 -48914782 - AluSx SINE Alu -4 308 1 252 264 28 14 chr2 201774157 201774229 -48913625 + MIR SINE MIR 69 141 -67 481 229 48 0 chr2 201774495 201774600 -48913254 + L2 LINE L2 3204 3313 0 536 303 73 18 chr2 201775929 201776147 -48911707 - MIR SINE MIR -6 256 27 338 179 134 104 chr2 201776575 201776709 -48911145 + L1ME3A LINE L1 6028 6165 -5 350 318 78 34 chr2 201777187 201777481 -48910373 - L2 LINE L2 -20 3293 2883 337 271 40 68 chr2 201777495 201777672 -48910182 - MER20B DNA MER1_type -605 178 7 900 220 17 6 chr2 201778494 201778667 -48909187 + MER45A DNA AcHobo 1 175 -3 1765 161 140 6 chr2 201778719 201779041 -48908813 + MLT1A1 LTR MaLR 1 365 0 22 35 0 0 chr2 201979116 201979145 -48708709 + AT_rich Low_complexity Low_complexity 1 29 0 302 125 36 0 chr2 201979316 201979372 -48708482 + CT-rich Low_complexity Low_complexity 3 60 0 2359 70 10 3 chr2 201979457 201979759 -48708095 - AluY SINE Alu -7 304 1 492 244 147 6 chr2 201980001 201980157 -48707697 + MER5B DNA MER1_type 1 178 0 206 329 0 14 chr2 201980254 201980324 -48707530 + CT-rich Low_complexity Low_complexity 1 69 0 2345 275 81 71 chr2 201980419 201980640 -48707214 - HAL1b LINE L1 -631 1658 1441 2369 77 13 7 chr2 201980640 201980950 -48706904 - AluSp SINE Alu -1 312 1 2345 275 81 71 chr2 201980950 201981822 -48706032 - HAL1b LINE L1 -848 1441 676 1342 163 173 10 chr2 201981822 201982117 -48705737 + MER2 DNA MER2_type 1 343 -1 2345 275 81 71 chr2 201982117 201982800 -48705054 - HAL1b LINE L1 -1613 676 1 456 307 80 19 chr2 201983830 201984042 -48703812 - MLT1L LTR MaLR -190 425 201 252 0 0 0 chr2 201985918 201985946 -48701908 + (TG)n Simple_repeat Simple_repeat 1 28 0 375 130 49 0 chr2 201986397 201986520 -48701334 + (TA)n Simple_repeat Simple_repeat 1 129 0 548 267 71 48 chr2 201986566 201986776 -48701078 - MIR SINE MIR -34 228 14 433 309 116 13 chr2 201986783 201987016 -48700838 - MIR SINE MIR -3 259 3 21 0 0 0 chr2 201987126 201987147 -48700707 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 201987454 201987475 -48700379 + AT_rich Low_complexity Low_complexity 1 21 0 829 190 0 0 chr2 201987894 201988015 -48699839 - FLAM_A SINE Alu -12 121 1 309 26 0 0 chr2 201988074 201988112 -48699742 + (TAGA)n Simple_repeat Simple_repeat 4 41 0 556 257 124 32 chr2 201988213 201988431 -48699423 - MIR SINE MIR -2 260 23 1858 160 7 0 chr2 201988599 201988899 -48698955 + AluSx SINE Alu 1 302 -10 242 287 65 65 chr2 201988902 201989234 -48698620 + L1ME4a LINE L1 5645 5983 -138 219 36 0 0 chr2 201989453 201989481 -48698373 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2261 91 0 0 chr2 201989489 201989774 -48698080 - AluSc SINE Alu -24 285 1 1821 159 105 0 chr2 201989918 201990232 -48697622 + MER7A DNA MER2_type 2 346 0 230 65 0 0 chr2 201990582 201990613 -48697241 - MADE1 DNA Mariner -49 31 1 274 250 232 18 chr2 201993074 201993186 -48694668 - MER5A DNA MER1_type -6 183 48 1113 172 16 0 chr2 201993218 201993404 -48694450 - MER5A DNA MER1_type 0 189 1 461 232 54 97 chr2 201993412 201993597 -48694257 + MER5B DNA MER1_type 2 178 0 219 350 62 0 chr2 201993715 201993812 -48694042 + L2 LINE L2 2947 3049 -223 2357 97 0 3 chr2 201993883 201994191 -48693663 + AluY SINE Alu 3 309 -2 624 154 160 6 chr2 201994595 201994747 -48693107 + MER5A DNA MER1_type 4 182 -7 1545 166 42 21 chr2 201994751 201995035 -48692819 + AluJb SINE Alu 3 292 -20 554 232 99 26 chr2 201995123 201995274 -48692580 + MIR SINE MIR 86 247 -15 27 29 0 0 chr2 201995389 201995423 -48692431 + AT_rich Low_complexity Low_complexity 1 34 0 393 204 146 0 chr2 201996107 201996210 -48691644 - L2 LINE L2 -4 3309 3192 216 0 0 0 chr2 201996780 201996804 -48691050 + (GA)n Simple_repeat Simple_repeat 1 24 0 270 293 24 12 chr2 201997531 201997613 -48690241 + L2 LINE L2 3211 3293 -20 347 286 57 36 chr2 201997692 201997832 -48690022 - MIR SINE MIR -117 145 3 2052 75 0 26 chr2 201997957 201998223 -48689631 + AluY SINE Alu 1 259 -52 425 289 26 42 chr2 201999636 201999826 -48688028 - MER117 DNA MER1_type -6 191 5 194 369 51 6 chr2 201999837 202000013 -48687841 + L2 LINE L2 2691 2874 -440 524 234 27 18 chr2 202000738 202000849 -48687005 - MER81 DNA DNA 0 114 3 296 44 44 0 chr2 202000979 202001024 -48686830 + (CATTA)n Simple_repeat Simple_repeat 2 48 0 891 318 70 39 chr2 202001024 202001217 -48686637 - L1MC4a LINE L1 -1907 5901 5715 210 71 0 0 chr2 202001217 202001245 -48686609 + (CA)n Simple_repeat Simple_repeat 2 29 0 891 318 70 39 chr2 202001245 202001670 -48686184 - L1MC4a LINE L1 -2093 5715 5264 532 318 88 49 chr2 202002244 202002778 -48685076 + MLT1K LTR MaLR 16 570 -18 274 292 128 96 chr2 202003822 202004041 -48683813 + L2 LINE L2 3038 3263 -9 414 0 0 0 chr2 202007184 202007230 -48680624 + (TA)n Simple_repeat Simple_repeat 2 47 0 244 261 119 45 chr2 202008441 202008575 -48679279 - MIR SINE MIR -40 222 79 1421 270 48 16 chr2 202008713 202009147 -48678707 - L3b LINE CR1 -1 1582 1135 2566 56 0 0 chr2 202010565 202010870 -48676984 + AluY SINE Alu 1 305 -6 240 197 45 30 chr2 202011087 202011153 -48676701 - MER5B DNA MER1_type 0 178 112 421 226 0 15 chr2 202011357 202011490 -48676364 + CT-rich Low_complexity Low_complexity 1 131 0 504 244 65 61 chr2 202012110 202012356 -48675498 + MIR SINE MIR 16 262 0 22 0 0 0 chr2 202014324 202014346 -48673508 + AT_rich Low_complexity Low_complexity 1 22 0 2073 144 0 0 chr2 202014667 202014973 -48672881 + AluSx SINE Alu 1 306 -6 374 225 0 0 chr2 202015077 202015148 -48672706 + MIR SINE MIR 84 154 -108 201 278 19 0 chr2 202015546 202015600 -48672254 + MIR SINE MIR 159 213 -49 521 284 80 55 chr2 202016935 202016998 -48670856 - MLT1K LTR MaLR -3 585 525 189 74 0 0 chr2 202016998 202017025 -48670829 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 521 284 80 55 chr2 202017025 202017250 -48670604 - MLT1K LTR MaLR -63 525 290 396 350 7 7 chr2 202017526 202017666 -48670188 - MLT1K LTR MaLR -387 162 23 244 231 90 60 chr2 202017679 202017813 -48670041 - MLT1K LTR MaLR -294 294 157 448 221 35 117 chr2 202018279 202018424 -48669430 - MLT1G1 LTR MaLR -12 583 451 242 246 44 98 chr2 202018484 202018598 -48669256 + MIR SINE MIR 92 197 -63 380 310 35 7 chr2 202020672 202020817 -48667037 - MIR SINE MIR -8 254 106 566 250 88 0 chr2 202020878 202021026 -48666828 - MIR SINE MIR -54 208 48 213 65 0 0 chr2 202021197 202021228 -48666626 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 219 217 0 0 chr2 202022766 202022826 -48665028 + (TG)n Simple_repeat Simple_repeat 2 61 0 2309 89 3 0 chr2 202023016 202023307 -48664547 - AluSp SINE Alu -21 292 1 234 333 141 10 chr2 202024916 202025114 -48662740 - LTR67 LTR ERVL -317 240 17 2156 92 0 60 chr2 202025189 202025504 -48662350 + AluSc SINE Alu 1 296 -13 264 137 0 0 chr2 202026736 202026787 -48661067 + (TG)n Simple_repeat Simple_repeat 1 51 0 398 263 105 74 chr2 202028454 202028739 -48659115 - MLT1J LTR MaLR -7 504 211 459 237 128 94 chr2 202028860 202029235 -48658619 + MER34B LTR ERV1 6 453 -112 1764 185 7 0 chr2 202029235 202029532 -48658322 + AluJo SINE Alu 1 299 -13 459 237 128 94 chr2 202029532 202029649 -48658205 + MER34B LTR ERV1 453 565 0 727 327 108 49 chr2 202029840 202030173 -48657681 + L2 LINE L2 2043 2355 -917 307 60 40 0 chr2 202030173 202030223 -48657631 + (TTTG)n Simple_repeat Simple_repeat 4 55 0 2081 118 0 0 chr2 202030223 202030503 -48657351 - AluSx SINE Alu -32 280 1 727 327 108 49 chr2 202030503 202031313 -48656541 + L2 LINE L2 2354 3270 -2 400 341 37 7 chr2 202031375 202031510 -48656344 - L2 LINE L2 0 3272 3134 1510 249 70 10 chr2 202032315 202032712 -48655142 - MLT1E2 LTR MaLR 0 626 206 248 235 72 78 chr2 202032911 202033064 -48654790 - MLT2C2 LTR ERVL -259 205 54 * 570 180 29 72 chr2 202032931 202033070 -48654784 - MLT1E2 LTR MaLR -423 201 69 7526 23 0 3 chr2 202033159 202034025 -48653829 + L1P LINE L1 4111 4973 -1173 2020 88 73 0 chr2 202034374 202034647 -48653207 - AluSc SINE Alu -16 293 1 22 88 0 0 chr2 202035207 202035264 -48652590 + AT_rich Low_complexity Low_complexity 1 57 0 484 271 15 73 chr2 202035288 202035372 -48652482 - LTR16B LTR ERVL 0 464 377 1544 102 65 0 chr2 202035372 202035588 -48652266 + MER30 DNA MER1_type 1 230 0 484 271 15 73 chr2 202035588 202035776 -48652078 - LTR16B LTR ERVL -87 377 208 308 284 81 46 chr2 202036048 202036245 -48651609 - LTR16B LTR ERVL -257 207 4 2174 132 0 0 chr2 202036316 202036612 -48651242 + AluSx SINE Alu 1 296 -16 189 74 0 0 chr2 202036615 202036642 -48651212 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2016 46 21 0 chr2 202038051 202038291 -48649563 + L1PA4 LINE L1 5910 6154 -1 455 222 83 14 chr2 202038973 202039117 -48648737 + LTR33 LTR ERVL 47 200 -321 327 273 111 0 chr2 202039217 202039316 -48648538 + LTR33 LTR ERVL 218 327 -194 679 191 46 46 chr2 202041966 202042097 -48645757 - FLAM_A SINE Alu -2 131 1 579 253 168 5 chr2 202042811 202043013 -48644841 + MIR SINE MIR 28 262 0 2241 141 39 30 chr2 202043143 202043504 -48644350 + THE1B LTR MaLR 1 364 0 371 239 44 62 chr2 202045474 202045587 -48642267 + MER21B LTR ERV1 1 111 -752 * 1029 195 47 74 chr2 202045575 202045831 -48642023 + MER21B LTR ERV1 614 862 -1 269 297 20 20 chr2 202045926 202045966 -48641888 - MIR SINE MIR -49 213 174 697 230 209 16 chr2 202045966 202046153 -48641701 - MER58A DNA MER1_type 0 224 2 269 297 20 20 chr2 202046153 202046213 -48641641 - MIR SINE MIR -87 175 113 1043 208 35 0 chr2 202047293 202047495 -48640359 - MER3 DNA MER1_type 0 209 1 335 217 183 50 chr2 202047862 202047982 -48639872 + MLT1K LTR MaLR 447 582 -6 243 286 0 55 chr2 202049376 202049467 -48638387 - MIR SINE MIR -55 207 122 292 296 0 43 chr2 202049786 202049901 -48637953 - MIR SINE MIR 0 262 153 630 183 137 116 chr2 202049959 202050200 -48637654 + MIR SINE MIR 15 260 -2 614 213 53 58 chr2 202050197 202050385 -48637469 + MIR SINE MIR 74 260 -2 * 2335 146 42 23 chr2 202050386 202050818 -48637036 + LTR7 LTR ERV1 1 440 -10 762 232 62 126 chr2 202053596 202053954 -48633900 - MER46C DNA MER2_type -1 337 3 198 0 0 0 chr2 202054197 202054219 -48633635 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 196 306 0 0 chr2 202054222 202054271 -48633583 - L2 LINE L2 -15 3257 3209 820 158 0 0 chr2 202057662 202057795 -48630059 + FLAM_A SINE Alu 10 142 0 1875 247 23 17 chr2 202057795 202058276 -48629578 - L1ME1 LINE L1 -35 6131 5648 2213 117 3 3 chr2 202058697 202059004 -48628850 + AluSx SINE Alu 1 307 -5 24 32 0 0 chr2 202060411 202060442 -48627412 + AT_rich Low_complexity Low_complexity 1 31 0 201 74 0 0 chr2 202062726 202062753 -48625101 + (TTA)n Simple_repeat Simple_repeat 2 28 0 369 0 0 0 chr2 202064208 202064249 -48623605 + (TG)n Simple_repeat Simple_repeat 2 42 0 183 129 0 0 chr2 202064854 202064885 -48622969 + (TCTCTG)n Simple_repeat Simple_repeat 2 32 0 338 0 0 23 chr2 202064912 202064955 -48622899 + (CA)n Simple_repeat Simple_repeat 1 42 0 731 286 70 13 chr2 202066041 202066342 -48621512 + LTR16C LTR ERVL 174 491 0 347 218 212 24 chr2 202066661 202066826 -48621028 + Charlie7 DNA MER1_type 2417 2612 0 730 318 33 0 chr2 202066830 202067072 -48620782 + MIR SINE MIR 13 262 0 488 306 146 23 chr2 202068495 202068926 -48618928 - LTR33 LTR ERVL -17 504 21 462 340 7 0 chr2 202070751 202070898 -48616956 - L2 LINE L2 -656 2658 2511 751 313 102 30 chr2 202070902 202071735 -48616119 - L2 LINE L2 -35 3278 2380 1651 177 16 35 chr2 202073245 202073561 -48614293 - AluJo SINE Alu 0 312 3 207 231 0 77 chr2 202074018 202074083 -48613771 + L2 LINE L2 3254 3313 0 195 42 0 0 chr2 202074423 202074447 -48613407 + (TA)n Simple_repeat Simple_repeat 2 25 0 2339 115 0 6 chr2 202075613 202075925 -48611929 + AluSq SINE Alu 1 310 -3 994 219 125 29 chr2 202076351 202076762 -48611092 + MLT1C LTR MaLR 18 465 -2 2599 64 0 0 chr2 202077679 202077990 -48609864 + AluY SINE Alu 1 311 0 1521 180 3 57 chr2 202079406 202079722 -48608132 - AluJo SINE Alu -13 299 1 721 283 44 51 chr2 202079889 202080204 -48607650 - L2 LINE L2 -1 3312 3000 2167 117 0 3 chr2 202080599 202080890 -48606964 + AluSg SINE Alu 5 294 -16 328 316 120 15 chr2 202082088 202082221 -48605633 - L2 LINE L2 0 3272 3126 2766 171 75 2 chr2 202082254 202082723 -48605131 - MLT1D LTR MaLR -2 503 1 242 271 39 94 chr2 202082940 202083121 -48604733 - MIR3 SINE MIR -7 201 31 2402 77 7 0 chr2 202084658 202084955 -48602899 + AluSg SINE Alu 1 299 -11 436 258 137 34 chr2 202085610 202085843 -48602011 - MLT1J1 LTR MaLR -124 322 66 1133 289 58 39 chr2 202085880 202086447 -48601407 - MLT1K LTR MaLR -8 580 3 207 0 0 0 chr2 202087222 202087245 -48600609 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 729 266 132 20 chr2 202089373 202089768 -48598086 + LTR16A LTR ERVL 11 449 -1 745 259 113 44 chr2 202089768 202090086 -48597768 - MLT1K LTR MaLR 0 588 200 836 241 29 6 chr2 202090086 202090260 -48597594 - MER45A DNA AcHobo 0 178 1 745 259 113 44 chr2 202090260 202090330 -48597524 - MLT1K LTR MaLR -388 200 136 510 339 26 9 chr2 202090440 202090673 -48597181 + MIR SINE MIR 6 242 -20 217 214 0 0 chr2 202090790 202090832 -48597022 + MIR SINE MIR 90 131 -77 546 281 48 33 chr2 202094062 202094272 -48593582 + MIR SINE MIR 34 246 -16 213 211 0 0 chr2 202095194 202095246 -48592608 + CT-rich Low_complexity Low_complexity 1 52 0 383 315 35 28 chr2 202095731 202095874 -48591980 + MIR3 SINE MIR 54 197 -11 231 133 0 0 chr2 202096008 202096053 -48591801 + (A)n Simple_repeat Simple_repeat 1 45 0 420 263 0 9 chr2 202096529 202096643 -48591211 - MER103 DNA DNA -42 124 12 357 328 56 8 chr2 202097000 202097125 -48590729 - L2 LINE L2 -24 3248 3118 181 206 0 0 chr2 202097153 202097187 -48590667 - MIR SINE MIR 0 262 229 310 224 24 12 chr2 202097197 202097282 -48590572 + MER52A LTR ERV1 1 86 -1669 7332 162 53 70 chr2 202097282 202098853 -48589001 + MER52A LTR ERV1 211 1755 0 318 272 22 11 chr2 202098853 202098945 -48588909 - MIR SINE MIR -66 196 104 534 320 140 37 chr2 202099155 202099746 -48588108 - L2 LINE L2 -420 2894 2243 637 268 11 28 chr2 202100177 202100356 -48587498 + LTR16C LTR ERVL 314 489 -2 1028 100 0 0 chr2 202100388 202100518 -48587336 + FRAM SINE Alu 23 152 -24 210 37 0 0 chr2 202100519 202100546 -48587308 + (TTAAA)n Simple_repeat Simple_repeat 4 30 0 313 250 50 0 chr2 202100610 202100690 -48587164 + L1MC4 LINE L1 6613 6696 -1346 244 165 268 41 chr2 202100794 202100891 -48586963 + L1ME4a LINE L1 5639 5757 -364 1753 162 156 6 chr2 202100912 202101251 -48586603 + MLT1B LTR MaLR 1 390 0 868 254 8 47 chr2 202101262 202101518 -48586336 - MIR SINE MIR 0 262 17 3853 122 23 2 chr2 202101518 202102034 -48585820 - MER1A DNA MER1_type 0 527 1 351 243 34 17 chr2 202102165 202102263 -48585591 + (TA)n Simple_repeat Simple_repeat 1 105 -75 2160 183 11 14 chr2 202102263 202102629 -48585225 + MLT1A1 LTR MaLR 1 365 0 351 243 34 17 chr2 202102629 202102707 -48585147 + (TA)n Simple_repeat Simple_repeat 105 180 0 360 205 63 47 chr2 202102731 202102858 -48584996 + L1ME4a LINE L1 5979 6107 -14 279 0 0 0 chr2 202104029 202104060 -48583794 + (TG)n Simple_repeat Simple_repeat 2 32 0 255 298 86 13 chr2 202104419 202104570 -48583284 - L2 LINE L2 0 3313 3152 1677 161 16 26 chr2 202104596 202104901 -48582953 + AluJb SINE Alu 6 307 -5 2720 137 12 14 chr2 202104904 202105321 -48582533 - Tigger2 DNA MER2_type 0 2718 2303 408 174 14 0 chr2 202105321 202105390 -48582464 - Tigger2 DNA MER2_type -2648 70 1 792 290 83 30 chr2 202105391 202105787 -48582067 - L2 LINE L2 -157 3156 2731 1938 202 25 3 chr2 202105867 202106224 -48581630 + MLT1A1 LTR MaLR 1 365 0 275 221 41 157 chr2 202106575 202106747 -48581107 + L1ME2 LINE L1 152 303 -5902 2189 104 17 0 chr2 202106754 202107053 -48580801 + AluSq SINE Alu 1 304 -9 861 163 21 8 chr2 202107056 202107296 -48580558 + GA-rich Low_complexity Low_complexity 1 243 0 3215 250 56 37 chr2 202107374 202107858 -48579996 + L1ME2 LINE L1 1375 1848 -4367 2832 216 53 27 chr2 202107858 202108310 -48579544 + MER82 DNA MER2_type 2 477 -176 2360 88 0 0 chr2 202108310 202108606 -48579248 + AluSg SINE Alu 1 296 -14 2832 216 53 27 chr2 202108606 202108788 -48579066 + MER82 DNA MER2_type 477 653 0 3215 250 56 37 chr2 202108788 202110291 -48577563 + L1ME2 LINE L1 1848 3365 -2850 * 3411 221 59 37 chr2 202110286 202111325 -48576529 + L1ME2 LINE L1 4345 5486 -747 1220 126 117 5 chr2 202111325 202111539 -48576315 - L1PA16 LINE L1 -9 6157 5920 3411 221 59 37 chr2 202111539 202112304 -48575550 + L1ME2 LINE L1 5486 6233 0 317 243 14 101 chr2 202112314 202112370 -48575484 + L1MC5 LINE L1 7782 7841 -120 1957 176 104 0 chr2 202112370 202112727 -48575127 + MSTD LTR MaLR 1 394 -2 317 243 14 101 chr2 202112727 202112818 -48575036 + L1MC5 LINE L1 7841 7916 -45 236 218 73 0 chr2 202112996 202113051 -48574803 - L2 LINE L2 -3 3269 3211 297 209 279 0 chr2 202113660 202113746 -48574108 + MER34 LTR ERV1 1 110 -432 783 146 16 0 chr2 202113807 202113930 -48573924 - L1PA16 LINE L1 -9 6157 6033 1742 213 41 17 chr2 202113937 202114355 -48573499 + MER39 LTR ERV1 279 706 -1 266 264 0 28 chr2 202114437 202114509 -48573345 + GA-rich Low_complexity Low_complexity 3 72 0 2230 91 14 7 chr2 202114889 202115185 -48572669 - AluSg1 SINE Alu -11 298 1 2235 129 0 0 chr2 202116390 202116700 -48571154 + AluSx SINE Alu 1 310 -2 2378 82 7 0 chr2 202116714 202117017 -48570837 + AluSp SINE Alu 1 305 -8 181 302 216 9 chr2 202117466 202117582 -48570272 - MIR3 SINE MIR -65 143 4 237 349 20 47 chr2 202117653 202117802 -48570052 + MER5A DNA MER1_type 18 162 -27 810 197 0 33 chr2 202117993 202118145 -48569709 + MER5A DNA MER1_type 37 183 -6 1983 150 0 17 chr2 202118149 202118449 -48569405 + AluJb SINE Alu 1 295 -17 293 246 216 30 chr2 202118449 202118616 -48569238 - L3b LINE CR1 -78 1505 1308 244 298 12 24 chr2 202118771 202118855 -48568999 + L2 LINE L2 3182 3264 -8 318 302 38 45 chr2 202119984 202120171 -48567683 + MIR SINE MIR 3 183 -63 1920 129 69 77 chr2 202121071 202121142 -48566712 + MER7A DNA MER2_type 2 72 -2966 2102 121 3 0 chr2 202121142 202121431 -48566423 - AluSq SINE Alu -23 290 1 1920 129 69 77 chr2 202121431 202121709 -48566145 + MER7A DNA MER2_type 72 346 0 405 311 23 8 chr2 202122112 202122244 -48565610 + MIR SINE MIR 112 245 -17 4264 129 15 29 chr2 202122270 202122931 -48564923 - MER39B LTR ERV1 -1 652 1 414 242 20 0 chr2 202123115 202123214 -48564640 + MIR SINE MIR 158 258 -4 2206 77 59 3 chr2 202124162 202124449 -48563405 - AluSc SINE Alu -6 303 1 213 293 0 0 chr2 202126204 202126262 -48561592 + (CA)n Simple_repeat Simple_repeat 1 58 0 226 229 0 21 chr2 202127043 202127091 -48560763 - L2 LINE L2 0 3313 3267 1447 327 84 30 chr2 202127228 202128125 -48559729 - L3 LINE CR1 -1 1576 632 189 325 78 0 chr2 202128392 202128469 -48559385 + L2 LINE L2 2224 2306 -1008 239 344 46 33 chr2 202128492 202128643 -48559211 + L2 LINE L2 3161 3313 0 2355 98 12 76 chr2 202130999 202131419 -48556435 + L1MA8 LINE L1 5894 6286 -5 238 326 0 22 chr2 202131720 202131809 -48556045 + L2 LINE L2 3143 3229 -43 432 0 0 0 chr2 202132045 202132093 -48555761 + (CA)n Simple_repeat Simple_repeat 1 48 0 259 319 70 65 chr2 202132487 202132672 -48555182 - MER5A DNA MER1_type -3 186 1 259 288 61 0 chr2 202132707 202132773 -48555081 + L2 LINE L2 3171 3240 -32 337 284 85 23 chr2 202133354 202133530 -48554324 + MIR SINE MIR 64 250 -12 3935 100 130 0 chr2 202133534 202134096 -48553758 + MER41B LTR ERV1 1 635 0 235 191 73 29 chr2 202135182 202135250 -48552604 + L1ME LINE L1 5582 5652 -469 1158 228 62 49 chr2 202135381 202135750 -48552104 + MER87 LTR ERV1 168 541 0 24 0 0 0 chr2 202135879 202135903 -48551951 + AT_rich Low_complexity Low_complexity 1 24 0 209 240 22 44 chr2 202136059 202136099 -48551755 + (TA)n Simple_repeat Simple_repeat 1 40 -139 2144 119 0 7 chr2 202136099 202136394 -48551460 + AluSc SINE Alu 1 293 -16 209 240 22 44 chr2 202136394 202136536 -48551318 + (TA)n Simple_repeat Simple_repeat 40 179 0 213 328 0 16 chr2 202136861 202136922 -48550932 + MER91A DNA MER1_type 109 168 -28 255 241 65 102 chr2 202136929 202137037 -48550817 + MER91A DNA MER1_type 89 192 -4 256 247 41 41 chr2 202137734 202137880 -48549974 - L1ME4a LINE L1 -2 6119 5974 23 68 0 0 chr2 202138201 202138245 -48549609 + AT_rich Low_complexity Low_complexity 1 44 0 240 164 224 0 chr2 202138253 202138320 -48549534 + MLT1C LTR MaLR 1 82 -385 5318 83 4 1 chr2 202138340 202139024 -48548830 - L1PB2 LINE L1 -2 6149 5464 1558 184 74 43 chr2 202139024 202139416 -48548438 + MLT1C LTR MaLR 64 467 0 338 308 68 30 chr2 202139542 202139805 -48548049 - L1ME4a LINE L1 -321 5800 5528 690 310 42 4 chr2 202140117 202140356 -48547498 + MIR SINE MIR 3 250 -12 21 0 0 0 chr2 202141644 202141665 -48546189 + AT_rich Low_complexity Low_complexity 1 21 0 457 304 50 45 chr2 202141730 202141931 -48545923 + MIR SINE MIR 11 212 -50 537 272 154 24 chr2 202142285 202142583 -48545271 + L2 LINE L2 2680 3010 -262 499 305 122 0 chr2 202143071 202143235 -48544619 + MER91A DNA MER1_type 1 184 -12 204 340 37 14 chr2 202143634 202143749 -48544105 + MIR SINE MIR 8 118 -90 558 79 0 0 chr2 202143754 202143830 -48544024 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 829 251 123 64 chr2 202143838 202144276 -48543578 + LTR16B LTR ERVL 1 464 0 874 251 99 59 chr2 202144487 202144893 -48542961 + MLT1J LTR MaLR 1 430 -81 258 32 0 0 chr2 202144893 202144924 -48542930 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 874 251 99 59 chr2 202144924 202144992 -48542862 + MLT1J LTR MaLR 430 494 -17 21 0 0 0 chr2 202147364 202147385 -48540469 + AT_rich Low_complexity Low_complexity 1 21 0 335 323 192 4 chr2 202147446 202147675 -48540179 + L2 LINE L2 2552 2823 -491 297 0 0 0 chr2 202147699 202147732 -48540122 + (CA)n Simple_repeat Simple_repeat 2 34 0 187 271 24 59 chr2 202147859 202147944 -48539910 + L2 LINE L2 2966 3047 -225 300 294 117 37 chr2 202149729 202149892 -48537962 + MIR SINE MIR 8 183 -79 600 260 7 7 chr2 202151151 202151305 -48536549 + MER103 DNA DNA 13 166 0 625 254 40 0 chr2 202151735 202151908 -48535946 + MIR SINE MIR 48 227 -35 204 228 105 18 chr2 202151947 202152004 -48535850 + L2 LINE L2 3248 3309 -4 445 216 174 88 chr2 202152216 202152544 -48535310 + L1ME4a LINE L1 5653 6008 -113 4137 93 17 0 chr2 202153026 202153544 -48534310 - MER1A DNA MER1_type 0 527 1 1213 222 71 1 chr2 202153565 202153875 -48533979 + L1ME1 LINE L1 5587 5924 -242 2424 205 118 52 chr2 202153902 202154595 -48533259 - Charlie1a DNA MER1_type -716 739 1 1292 110 0 0 chr2 202154742 202154915 -48532939 - AluSg/x SINE Alu -7 305 133 462 255 77 71 chr2 202155326 202155522 -48532332 + MIR SINE MIR 18 214 -48 186 43 0 0 chr2 202156445 202156468 -48531386 + (TA)n Simple_repeat Simple_repeat 1 23 0 2260 112 128 5 chr2 202156575 202156951 -48530903 + MSTA LTR MaLR 1 422 -6 244 175 17 25 chr2 202157267 202157387 -48530467 + (TA)n Simple_repeat Simple_repeat 1 119 0 426 305 82 35 chr2 202157421 202157736 -48530118 - L1ME LINE L1 -523 5647 5318 332 303 124 0 chr2 202157768 202157857 -48529997 - MER58A DNA MER1_type -6 101 2 225 348 66 16 chr2 202157912 202158168 -48529686 - L1ME LINE L1 -1811 4335 4067 2012 130 33 0 chr2 202158201 202158502 -48529352 - AluSx SINE Alu -1 311 1 236 306 10 0 chr2 202158513 202158611 -48529243 - L1ME LINE L1 -2106 4040 3942 603 320 112 18 chr2 202158737 202159175 -48528679 - L1ME LINE L1 -2210 3936 3458 222 195 0 0 chr2 202159187 202159228 -48528626 + (CA)n Simple_repeat Simple_repeat 2 42 0 240 299 52 13 chr2 202159478 202159555 -48528299 - MER5A DNA MER1_type 0 189 110 416 278 47 53 chr2 202159762 202159931 -48527923 + MIR3 SINE MIR 41 208 0 1548 164 120 22 chr2 202160441 202160716 -48527138 - AluJo SINE Alu 0 302 1 2275 78 4 0 chr2 202160789 202161094 -48526760 - AluY SINE Alu 0 306 1 297 243 0 14 chr2 202161834 202161904 -48525950 - MIR3 SINE MIR -6 202 134 2682 17 0 0 chr2 202162039 202162333 -48525521 + AluYa5 SINE Alu 9 302 -9 4630 171 13 21 chr2 202162665 202162741 -48525113 + L1MB7 LINE L1 5322 5397 -787 2192 88 0 0 chr2 202162741 202163015 -48524839 + AluSx SINE Alu 21 294 -18 4630 171 13 21 chr2 202163015 202163792 -48524062 + L1MB7 LINE L1 5397 6168 -16 263 333 19 9 chr2 202163928 202164033 -48523821 + L2 LINE L2 2560 2665 -649 255 325 43 69 chr2 202164241 202164429 -48523425 + L2 LINE L2 2875 3057 -215 292 305 21 102 chr2 202164533 202164690 -48523164 - MIR SINE MIR -68 140 27 2136 131 7 0 chr2 202165016 202165313 -48522541 - AluSx SINE Alu -13 299 1 401 258 96 71 chr2 202165557 202165755 -48522099 + MLT1I LTR MaLR 98 300 -109 193 250 0 0 chr2 202166437 202166485 -48521369 - L2 LINE L2 -3 3310 3263 829 217 55 90 chr2 202166485 202166775 -48521079 - Zaphod DNA AcHobo -1 4030 3751 252 245 112 63 chr2 202166804 202166947 -48520907 - Charlie8 DNA MER1_type -2222 195 46 1333 198 38 11 chr2 202167151 202167456 -48520398 - MER33 DNA MER1_type -16 308 1 1879 150 0 10 chr2 202167534 202167834 -48520020 - AluJo SINE Alu -13 299 3 391 304 31 57 chr2 202167838 202168032 -48519822 + MER5A DNA MER1_type 1 189 0 235 228 18 0 chr2 202168943 202169000 -48518854 + CT-rich Low_complexity Low_complexity 5 62 0 197 132 26 0 chr2 202169155 202169193 -48518661 + (TTA)n Simple_repeat Simple_repeat 3 41 0 656 306 113 29 chr2 202169453 202169835 -48518019 - L2 LINE L2 -1 3312 2899 312 253 162 35 chr2 202170261 202170459 -48517395 + L1M2 LINE L1 611 833 -6016 2729 26 0 3 chr2 202170966 202171275 -48516579 - AluY SINE Alu 0 311 4 452 250 6 107 chr2 202171344 202171512 -48516342 + MER104 DNA Tc2 30 180 0 456 326 20 11 chr2 202171605 202171799 -48516055 - MIR SINE MIR -60 202 3 4603 161 32 9 chr2 202171962 202172809 -48515045 - L1MA9 LINE L1 -992 5154 4289 * 5782 139 39 39 chr2 202172804 202173749 -48514105 + L1MA9 LINE L1 5152 6092 -220 1959 148 0 0 chr2 202173749 202174068 -48513786 + AluSx SINE Alu 1 319 0 5782 139 39 39 chr2 202174068 202174289 -48513565 + L1MA9 LINE L1 6092 6312 0 572 260 73 15 chr2 202174885 202175089 -48512765 + MIR SINE MIR 47 262 0 1906 125 5 53 chr2 202176692 202177056 -48510798 - MER4A LTR ERV1 0 664 261 528 146 31 10 chr2 202177056 202177152 -48510702 - MER4A LTR ERV1 -566 98 1 219 204 0 0 chr2 202178189 202178243 -48509611 + (TAA)n Simple_repeat Simple_repeat 2 55 0 365 290 96 86 chr2 202178334 202179126 -48508728 - L2 LINE L2 -5 3267 2479 414 231 56 75 chr2 202179130 202179290 -48508564 - MIR SINE MIR -100 162 6 495 289 25 55 chr2 202181007 202181208 -48506646 + MLT1L LTR MaLR 59 253 -362 2392 133 63 3 chr2 202181348 202181731 -48506123 - MSTB LTR MaLR -15 411 6 625 219 123 0 chr2 202185111 202185266 -48502588 - MER45A DNA AcHobo -4 174 1 2316 110 0 3 chr2 202186860 202187168 -48500686 - AluSq SINE Alu -6 307 1 1862 128 10 28 chr2 202188180 202188495 -48499359 - AluSx SINE Alu 0 310 1 275 187 30 19 chr2 202189947 202190031 -48497823 - MIR SINE MIR -63 145 101 684 110 0 0 chr2 202190058 202190158 -48497696 - AluY SINE Alu -12 299 200 296 276 143 57 chr2 202192767 202193137 -48494717 + MLT1H LTR MaLR 120 521 -28 2209 108 7 3 chr2 202193225 202193531 -48494323 + AluSx SINE Alu 1 307 -5 2578 107 6 3 chr2 202194060 202194423 -48493431 - THE1B LTR MaLR 0 364 1 677 253 61 12 chr2 202197219 202197464 -48490390 - MARNA DNA Mariner -210 376 120 451 139 0 0 chr2 202197952 202198031 -48489823 + MER53 DNA DNA 108 186 -3 391 284 87 37 chr2 202200037 202200255 -48487599 + L3 LINE CR1 661 889 -688 4001 93 2 9 chr2 202200868 202201025 -48486829 + MER41A LTR ERV1 1 158 -396 2252 108 0 0 chr2 202201025 202201321 -48486533 + AluSx SINE Alu 1 296 -16 4001 93 2 9 chr2 202201321 202201721 -48486133 + MER41A LTR ERV1 158 554 0 258 32 0 0 chr2 202202479 202202510 -48485344 + (CA)n Simple_repeat Simple_repeat 2 32 0 348 283 17 25 chr2 202202967 202203087 -48484767 + L3 LINE CR1 1241 1359 -218 1676 209 151 42 chr2 202203091 202203822 -48484032 + LTR1B LTR ERV1 1 1020 0 387 294 9 0 chr2 202203822 202203931 -48483923 + L3 LINE CR1 1362 1471 -106 582 236 75 29 chr2 202205769 202205943 -48481911 + MIR3 SINE MIR 26 207 -1 235 70 23 23 chr2 202207051 202207094 -48480760 + (TC)n Simple_repeat Simple_repeat 2 44 0 419 275 84 8 chr2 202207210 202207341 -48480513 + MIR SINE MIR 122 262 0 21 0 0 0 chr2 202207593 202207614 -48480240 + AT_rich Low_complexity Low_complexity 1 21 0 1441 192 13 66 chr2 202207616 202207933 -48479921 + AluJo SINE Alu 1 300 -12 297 0 0 0 chr2 202207952 202207962 -48479892 + (TG)n Simple_repeat Simple_repeat 1 43 0 297 0 0 0 chr2 202207962 202207995 -48479859 + (TG)n Simple_repeat Simple_repeat 2 34 0 210 37 0 0 chr2 202208010 202208037 -48479817 + (GA)n Simple_repeat Simple_repeat 1 27 0 321 316 48 43 chr2 202208038 202208225 -48479629 + MIR SINE MIR 20 207 -55 180 125 0 0 chr2 202210913 202210945 -48476909 + (TTG)n Simple_repeat Simple_repeat 3 34 0 954 151 5 0 chr2 202212992 202213184 -48474670 - L1MA4 LINE L1 -5 6295 6103 216 0 0 0 chr2 202213632 202213656 -48474198 + (A)n Simple_repeat Simple_repeat 1 24 0 695 157 9 0 chr2 202213958 202214073 -48473781 + FLAM_C SINE Alu 2 117 -16 22 0 0 0 chr2 202214088 202214110 -48473744 + AT_rich Low_complexity Low_complexity 1 22 0 2013 147 10 0 chr2 202214381 202214674 -48473180 + AluSx SINE Alu 1 296 -16 246 372 39 16 chr2 202215476 202215605 -48472249 + MIR SINE MIR 17 148 -60 301 236 154 0 chr2 202215650 202215760 -48472094 + L2 LINE L2 3182 3308 -5 263 292 108 19 chr2 202215825 202215994 -48471860 - MIR SINE MIR -1 261 17 329 269 10 101 chr2 202216849 202217057 -48470797 + MER5A DNA MER1_type 1 189 0 311 250 65 28 chr2 202217060 202217168 -48470686 + MIR SINE MIR 5 116 -146 432 0 0 0 chr2 202217659 202217707 -48470147 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 281 320 87 0 chr2 202218315 202218465 -48469389 + MLT1K LTR MaLR 69 231 -357 877 273 39 4 chr2 202218597 202218857 -48468997 + LTR16C LTR ERVL 168 436 -55 1303 221 52 76 chr2 202218872 202219387 -48468467 + MLT1D LTR MaLR 3 505 0 21 0 0 0 chr2 202219924 202219945 -48467909 + AT_rich Low_complexity Low_complexity 1 21 0 2085 110 11 0 chr2 202221143 202221445 -48466409 + AluSp SINE Alu 1 305 0 3047 263 119 32 chr2 202222204 202223732 -48464122 + L1MA9 LINE L1 43 1741 -4642 2021 132 7 0 chr2 202223732 202224036 -48463818 - AluSx SINE Alu 0 306 1 3047 263 119 32 chr2 202224036 202224565 -48463289 + L1MA9 LINE L1 1741 2222 -4161 1241 174 97 4 chr2 202224606 202224853 -48463001 - AluSx SINE Alu -11 301 32 31 58 0 0 chr2 202224884 202224936 -48462918 + AT_rich Low_complexity Low_complexity 1 52 0 924 253 55 2 chr2 202224952 202225414 -48462440 + L1M4c LINE L1 2039 2528 -3854 1574 160 59 37 chr2 202225446 202225844 -48462010 + L1MA8 LINE L1 5878 6283 -8 708 223 11 0 chr2 202225863 202226038 -48461816 + L1M4c LINE L1 2606 2782 -3600 11410 164 17 55 chr2 202226088 202228644 -48459210 + L1MA9 LINE L1 3005 5435 -1113 2185 110 0 43 chr2 202228644 202228970 -48458884 + AluSx SINE Alu 1 312 0 11410 164 17 55 chr2 202228970 202229781 -48458073 + L1MA9 LINE L1 5435 6275 -273 967 185 5 16 chr2 202229781 202229965 -48457889 + AluJo SINE Alu 120 301 -11 1243 161 0 0 chr2 202229967 202230191 -48457663 + L1MA9 LINE L1 6288 6511 -37 308 288 0 0 chr2 202231614 202231687 -48456167 - MIR3 SINE MIR -11 197 125 974 139 6 18 chr2 202231736 202231902 -48455952 - MSTD LTR MaLR 0 396 233 794 206 126 20 chr2 202232036 202232235 -48455619 - MSTD LTR MaLR -176 220 1 435 289 34 42 chr2 202232585 202232966 -48454888 + L1MC4a LINE L1 4886 5263 -883 842 179 0 0 chr2 202232985 202233119 -48454735 + AluJo SINE Alu 1 134 -178 313 235 31 58 chr2 202233158 202233755 -48454099 + L1MC4a LINE L1 5307 5883 -1925 2212 111 0 19 chr2 202233755 202234071 -48453783 + AluSg SINE Alu 1 310 0 313 235 31 58 chr2 202234071 202234253 -48453601 + L1MC4a LINE L1 5883 6068 -1740 377 304 16 40 chr2 202234465 202234590 -48453264 - L2 LINE L2 -1 3271 3150 922 181 0 0 chr2 202235249 202235409 -48452445 + MER3 DNA MER1_type 7 166 -43 315 312 79 96 chr2 202236071 202236539 -48451315 + L2 LINE L2 2804 3263 -9 510 262 64 43 chr2 202236682 202236869 -48450985 + Charlie8 DNA MER1_type 1 191 -2226 572 238 106 0 chr2 202239772 202239923 -48447931 + FRAM SINE Alu 9 175 -1 182 261 261 0 chr2 202241453 202241522 -48446332 - L2 LINE L2 0 3272 3186 410 183 42 92 chr2 202243101 202243243 -48444611 + MLT1J2 LTR MaLR 316 450 0 1387 304 82 48 chr2 202243485 202243627 -48444227 - L2 LINE L2 -6 3307 3171 191 88 29 0 chr2 202243627 202243661 -48444193 + (CA)n Simple_repeat Simple_repeat 1 35 0 1387 304 82 48 chr2 202243661 202244239 -48443615 - L2 LINE L2 -142 3171 2530 826 211 17 28 chr2 202244239 202244419 -48443435 + MER5B DNA MER1_type 1 178 0 1387 304 82 48 chr2 202244419 202244823 -48443031 - L2 LINE L2 -783 2530 2141 689 262 39 62 chr2 202245368 202245624 -48442230 + MIR SINE MIR 9 258 -4 192 302 32 16 chr2 202246677 202246740 -48441114 + L3 LINE CR1 1137 1200 -377 324 0 0 0 chr2 202247128 202247164 -48440690 + (TG)n Simple_repeat Simple_repeat 2 37 0 728 228 86 39 chr2 202248039 202248271 -48439583 - MIR SINE MIR -14 248 6 503 266 109 48 chr2 202248402 202248695 -48439159 + LTR16C LTR ERVL 3 313 -178 1888 112 26 4 chr2 202249085 202249352 -48438502 + AluSx SINE Alu 26 298 -14 406 176 77 22 chr2 202249481 202249572 -48438282 + MIR SINE MIR 105 200 -62 908 168 13 13 chr2 202249890 202250045 -48437809 + FRAM SINE Alu 5 159 -17 761 230 105 10 chr2 202250047 202250247 -48437607 - MIR SINE MIR -12 250 32 226 293 52 9 chr2 202253001 202253117 -48434737 + L1M4 LINE L1 2942 3062 -3084 778 159 45 8 chr2 202253190 202253322 -48434532 + Tigger1 DNA MER2_type 1 137 -2281 269 157 0 0 chr2 202253355 202253406 -48434448 - L1MA4A LINE L1 -11 6292 6242 559 150 0 150 chr2 202253429 202253494 -48434360 - L1PB1 LINE L1 -1 6150 6119 2209 81 0 4 chr2 202253494 202253765 -48434089 - AluSc SINE Alu -5 304 35 559 150 0 150 chr2 202253765 202253852 -48434002 - L1PB1 LINE L1 -32 6119 6021 2738 211 71 12 chr2 202254361 202254921 -48432933 - MLT1E LTR MaLR 0 593 1 2116 123 0 0 chr2 202255987 202256302 -48431552 - AluSx SINE Alu 0 315 1 956 236 0 15 chr2 202256315 202256618 -48431236 + MER89 LTR ERV1 1 397 -162 3768 129 2 28 chr2 202256624 202257165 -48430689 - MER1A DNA MER1_type 0 527 1 1443 226 28 61 chr2 202257169 202257682 -48430172 - MER39 LTR ERV1 -3 684 1 590 161 92 23 chr2 202257682 202257812 -48430042 + MER89 LTR ERV1 393 531 -28 1753 166 7 7 chr2 202258061 202258534 -48429320 + AluSx SINE Alu 1 473 0 246 105 0 0 chr2 202258550 202258588 -48429266 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 603 102 10 20 chr2 202258629 202258727 -48429127 - L1MB8 LINE L1 -12 6166 6070 484 250 27 14 chr2 202258790 202258938 -48428916 - MIR SINE MIR -2 260 111 1971 78 67 11 chr2 202259333 202259603 -48428251 + L1PA8 LINE L1 5888 6172 0 2279 98 3 3 chr2 202261543 202261840 -48426014 - AluSx SINE Alu -15 297 1 311 268 36 27 chr2 202262526 202262638 -48425216 + MER81 DNA DNA 2 114 0 41 0 0 0 chr2 202262857 202262898 -48424956 + AT_rich Low_complexity Low_complexity 1 41 0 632 274 13 0 chr2 202263763 202263916 -48423938 + MIR SINE MIR 69 223 -39 600 252 0 27 chr2 202264034 202264181 -48423673 + MER5B DNA MER1_type 36 178 0 991 147 13 13 chr2 202264714 202264871 -48422983 + FRAM SINE Alu 8 164 -12 274 236 16 94 chr2 202264987 202265114 -48422740 + MIR SINE MIR 92 208 -54 2214 117 3 0 chr2 202266225 202266523 -48421331 - AluSp SINE Alu -14 299 1 535 214 139 40 chr2 202266904 202267077 -48420777 + MLT1K LTR MaLR 399 588 0 334 224 15 0 chr2 202267089 202267156 -48420698 + L2 LINE L2 3228 3295 -18 23 0 0 0 chr2 202267207 202267230 -48420624 + AT_rich Low_complexity Low_complexity 1 23 0 452 314 41 18 chr2 202268364 202268533 -48419321 + MIR3 SINE MIR 23 195 -13 2234 106 0 3 chr2 202268601 202268893 -48418961 - AluSg SINE Alu -19 291 1 279 236 34 45 chr2 202270815 202270904 -48416950 + MIR3 SINE MIR 119 206 -2 448 266 32 24 chr2 202271553 202271677 -48416177 + MIR SINE MIR 12 136 -126 * 1477 247 114 39 chr2 202271662 202271855 -48415999 + L2 LINE L2 2272 2449 -864 2171 97 10 3 chr2 202271855 202272145 -48415709 - AluSx SINE Alu -9 303 12 1477 247 114 39 chr2 202272145 202272908 -48414946 + L2 LINE L2 2449 3313 0 24 0 0 70 chr2 202272908 202272951 -48414903 + AT_rich Low_complexity Low_complexity 1 40 0 311 184 66 0 chr2 202272956 202273032 -48414822 + MIR SINE MIR 139 219 -43 1970 153 10 0 chr2 202273345 202273640 -48414214 + AluJb SINE Alu 3 300 -12 2006 128 42 42 chr2 202273967 202274303 -48413551 + MER1B DNA MER1_type 1 336 -1 459 87 0 0 chr2 202274420 202274489 -48413365 + (TC)n Simple_repeat Simple_repeat 2 70 0 216 0 0 0 chr2 202274489 202274513 -48413341 + (CA)n Simple_repeat Simple_repeat 1 24 0 411 276 155 6 chr2 202274791 202274965 -48412889 + MIR SINE MIR 46 245 -17 783 189 23 15 chr2 202275282 202275414 -48412440 + FLAM_C SINE Alu 1 133 0 488 319 98 15 chr2 202276173 202276439 -48411415 + L2 LINE L2 1817 2104 -1210 839 226 129 66 chr2 202276450 202276892 -48410962 - HAL1 LINE L1 0 2507 2038 678 292 133 18 chr2 202276908 202277247 -48410607 - MLT1J2 LTR MaLR 0 450 73 2529 35 0 0 chr2 202277279 202277591 -48410263 + AluY SINE Alu 1 312 0 2247 104 7 0 chr2 202278247 202278544 -48409310 + AluSq SINE Alu 1 299 -14 571 324 40 8 chr2 202278790 202279037 -48408817 - HAL1 LINE L1 -503 2004 1750 2056 173 48 48 chr2 202279038 202279501 -48408353 - LTR40c LTR ERVL 0 465 3 350 291 13 0 chr2 202279598 202279677 -48408177 + L2 LINE L2 3168 3247 -25 228 200 0 0 chr2 202279766 202279816 -48408038 + (CA)n Simple_repeat Simple_repeat 1 50 0 233 0 62 0 chr2 202280130 202280162 -48407692 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2075 108 0 4 chr2 202280164 202280443 -48407411 - AluSg SINE Alu -32 278 1 952 243 63 0 chr2 202280447 202280653 -48407201 + MER20 DNA MER1_type 1 219 0 309 51 0 0 chr2 202280828 202280867 -48406987 + (T)n Simple_repeat Simple_repeat 1 39 0 228 163 0 0 chr2 202282565 202282608 -48405246 + CT-rich Low_complexity Low_complexity 3 45 0 283 274 28 84 chr2 202284347 202284526 -48403328 + MIR SINE MIR 78 246 -16 672 204 0 30 chr2 202284777 202284909 -48402945 + L1ME2 LINE L1 5451 5578 -586 366 23 0 0 chr2 202284912 202284955 -48402899 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 5982 60 0 0 chr2 202284958 202285730 -48402124 - L1PA6 LINE L1 -16 6138 5367 1792 239 56 7 chr2 202285730 202286286 -48401568 + L1ME2 LINE L1 5582 6164 0 434 139 0 0 chr2 202288006 202288078 -48399776 + L1PA16 LINE L1 6079 6150 -16 737 266 126 53 chr2 202288099 202288630 -48399224 + L1ME4a LINE L1 5357 5926 -195 235 244 93 0 chr2 202288675 202288761 -48399093 + L1ME4a LINE L1 6008 6101 -20 325 290 0 30 chr2 202289381 202289481 -48398373 + L2 LINE L2 3196 3292 -21 524 260 26 19 chr2 202289847 202290001 -48397853 - MIR SINE MIR -50 212 58 233 264 218 0 chr2 202291495 202291582 -48396272 - MIR SINE MIR -28 234 129 206 342 123 39 chr2 202292226 202292381 -48395473 - L2 LINE L2 -714 2600 2433 2126 141 0 3 chr2 202292863 202293160 -48394694 + AluSx SINE Alu 1 296 -16 187 355 0 0 chr2 202293241 202293303 -48394551 + L2 LINE L2 3248 3309 -4 383 326 61 7 chr2 202293438 202293585 -48394269 + MIR3 SINE MIR 4 158 -50 2025 141 0 0 chr2 202293622 202293937 -48393917 + AluSx SINE Alu 1 315 0 1564 207 83 7 chr2 202295049 202295483 -48392371 + MLT1C LTR MaLR 1 467 0 338 320 72 26 chr2 202297663 202297816 -48390038 + MIR SINE MIR 1 160 -102 342 0 0 0 chr2 202300510 202300548 -48387306 + (T)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr2 202300777 202300800 -48387054 + AT_rich Low_complexity Low_complexity 1 23 0 691 259 89 70 chr2 202300930 202301359 -48386495 + MLT1J LTR MaLR 24 460 -51 663 271 0 0 chr2 202301367 202301522 -48386332 + MIR SINE MIR 90 244 -18 720 244 28 0 chr2 202302435 202302652 -48385202 + LTR33 LTR ERVL 1 223 -298 716 188 39 17 chr2 202302781 202302962 -48384892 + MER53 DNA DNA 5 189 0 330 191 9 64 chr2 202303012 202303122 -48384732 + LTR33 LTR ERVL 410 513 -8 289 301 22 44 chr2 202303357 202303540 -48384314 - LTR16C LTR ERVL -10 481 303 1856 188 131 3 chr2 202304193 202304576 -48383278 + MSTB1 LTR MaLR 1 432 0 23 0 0 0 chr2 202305077 202305100 -48382754 + AT_rich Low_complexity Low_complexity 1 23 0 1617 251 30 24 chr2 202306476 202306985 -48380869 + L1MCb LINE L1 41 552 -5493 479 268 80 0 chr2 202307070 202307208 -48380646 + L1MCb LINE L1 571 719 -5326 466 296 91 89 chr2 202307923 202308505 -48379349 - MLT1K LTR MaLR -4 584 2 469 295 131 27 chr2 202309917 202310321 -48377533 - MLT1K LTR MaLR 0 588 143 1854 162 126 11 chr2 202310957 202311339 -48376515 - MSTA LTR MaLR -2 426 1 257 235 157 69 chr2 202311860 202311962 -48375892 - L2 LINE L2 -2 3311 3201 237 308 131 15 chr2 202312776 202312906 -48374948 - L2 LINE L2 -6 3266 3122 230 298 98 108 chr2 202312929 202313298 -48374556 - L2 LINE L2 0 3272 2908 210 335 26 86 chr2 202313446 202313715 -48374139 - L2 LINE L2 -208 3064 2812 2190 119 39 33 chr2 202314406 202314767 -48373087 + THE1B LTR MaLR 1 363 -1 256 321 0 71 chr2 202314946 202315114 -48372740 + MIR SINE MIR 107 262 0 916 230 62 0 chr2 202315231 202315440 -48372414 - MER58A DNA MER1_type 0 224 3 533 356 106 27 chr2 202315488 202316088 -48371766 - L2 LINE L2 0 3313 2657 459 194 128 109 chr2 202316665 202316876 -48370978 + MER20 DNA MER1_type 5 219 0 564 136 20 34 chr2 202316920 202317067 -48370787 + CT-rich Low_complexity Low_complexity 4 148 0 243 61 0 0 chr2 202317213 202317246 -48370608 + (ATTG)n Simple_repeat Simple_repeat 3 35 0 404 301 159 0 chr2 202317334 202317497 -48370357 - L3 LINE CR1 -58 1519 1331 408 298 108 64 chr2 202317692 202318127 -48369727 + L2 LINE L2 2592 3068 -204 415 355 73 13 chr2 202318637 202318950 -48368904 + LTR16C LTR ERVL 149 480 -11 1912 183 90 38 chr2 202319079 202319559 -48368295 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr2 202319724 202319745 -48368109 + AT_rich Low_complexity Low_complexity 1 21 0 1056 172 6 0 chr2 202319752 202319921 -48367933 - FAM SINE Alu -5 170 1 201 306 41 10 chr2 202319931 202320029 -48367825 - MIR SINE MIR -21 241 141 755 228 73 5 chr2 202320029 202320235 -48367619 + LTR33 LTR ERVL 3 222 -299 301 268 21 10 chr2 202320345 202320442 -48367412 + LTR33 LTR ERVL 421 518 -3 287 260 27 0 chr2 202321316 202321389 -48366465 - MIR3 SINE MIR -1 207 133 332 283 183 35 chr2 202321451 202321681 -48366173 + L2 LINE L2 2186 2449 -865 214 368 0 58 chr2 202321704 202321859 -48365995 + L2 LINE L2 2745 2890 -424 203 152 0 0 chr2 202322098 202322131 -48365723 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 253 196 0 0 chr2 202324326 202324377 -48363477 - L1M4 LINE L1 -310 5864 5814 5991 116 86 28 chr2 202324481 202325175 -48362679 + Tigger3b DNA MER2_type 1 653 -2375 1460 63 0 0 chr2 202325175 202325364 -48362490 - L1PA4 LINE L1 0 6155 5967 5991 116 86 28 chr2 202325364 202325498 -48362356 + Tigger3b DNA MER2_type 653 778 -2250 224 59 29 0 chr2 202325498 202325532 -48362322 + (CTCA)n Simple_repeat Simple_repeat 1 35 0 5991 116 86 28 chr2 202325532 202325865 -48361989 + Tigger3b DNA MER2_type 778 1231 0 257 259 17 0 chr2 202326384 202326442 -48361412 - MIR SINE MIR -102 106 48 397 294 27 21 chr2 202326460 202326672 -48361182 + MIR SINE MIR 10 256 -6 574 314 17 0 chr2 202327631 202327806 -48360048 + MIR SINE MIR 85 262 0 214 310 132 29 chr2 202328008 202328182 -48359672 - L2 LINE L2 -210 3062 2871 267 295 90 25 chr2 202328597 202328719 -48359135 - L2 LINE L2 -2 3270 3141 265 290 40 10 chr2 202328824 202328924 -48358930 - MIR SINE MIR -66 142 40 216 311 118 17 chr2 202329540 202329659 -48358195 + L2 LINE L2 2904 3034 -238 399 313 34 7 chr2 202329897 202330044 -48357810 + L2 LINE L2 3163 3313 0 193 152 0 0 chr2 202330393 202330426 -48357428 + L2 LINE L2 3265 3297 -16 2172 119 0 6 chr2 202330963 202331274 -48356580 - AluSx SINE Alu -3 309 1 769 247 84 58 chr2 202332129 202332659 -48355195 + MER39 LTR ERV1 1 700 -7 1303 143 5 9 chr2 202333447 202333670 -48354184 - L1PB1 LINE L1 -3 6148 5927 2215 91 9 0 chr2 202333670 202333999 -48353855 + L1P5 LINE L1 5345 5676 -475 2774 13 0 0 chr2 202334278 202334583 -48353271 + AluYb8 SINE Alu 1 305 -13 193 287 46 154 chr2 202334603 202334798 -48353056 + L3b LINE CR1 1183 1356 -227 1600 116 0 5 chr2 202335047 202335311 -48352543 + AluSc SINE Alu 66 328 0 1006 251 127 10 chr2 202335815 202336107 -48351747 - MER110 LTR ERV1 -6 485 159 827 296 32 57 chr2 202336107 202336546 -48351308 - LTR16A LTR ERVL -1 449 22 695 240 19 0 chr2 202336548 202336702 -48351152 - MER110 LTR ERV1 -330 161 5 24 0 0 0 chr2 202336914 202336938 -48350916 + AT_rich Low_complexity Low_complexity 1 24 0 1361 212 319 15 chr2 202337523 202338131 -48349723 - LTR50 LTR ERVL 0 795 3 953 213 82 0 chr2 202338153 202338360 -48349494 + MER58A DNA MER1_type 1 224 0 2192 121 45 20 chr2 202338923 202339278 -48348576 + THE1B LTR MaLR 1 364 0 5132 224 115 53 chr2 202340455 202340850 -48347004 - L1 LINE L1 -754 5392 5023 2221 123 0 0 chr2 202340850 202341150 -48346704 - AluSx SINE Alu -12 300 1 5132 224 115 53 chr2 202341150 202342685 -48345169 - L1 LINE L1 -1123 5023 3586 3384 100 11 4 chr2 202342685 202343135 -48344719 + MLT2A2 LTR ERVL 1 453 0 423 0 0 0 chr2 202343141 202343188 -48344666 + (TTTTA)n Simple_repeat Simple_repeat 2 48 0 5132 224 115 53 chr2 202343188 202343617 -48344237 - L1 LINE L1 -2564 3582 2849 2040 140 0 3 chr2 202343819 202344147 -48343707 - AluSx SINE Alu 0 327 1 1900 178 63 34 chr2 202344361 202344901 -48342953 - MLT2A2 LTR ERVL 0 554 1 2395 170 100 13 chr2 202344914 202345374 -48342480 - MLT1D LTR MaLR 0 505 6 2009 89 7 7 chr2 202345858 202346128 -48341726 - AluSq SINE Alu -7 306 37 1775 139 4 0 chr2 202346129 202346380 -48341474 - AluSq SINE Alu -61 252 1 549 344 62 11 chr2 202346887 202347163 -48340691 + L3 LINE CR1 1263 1552 -25 1566 201 141 26 chr2 202349732 202350185 -48337669 + MLT1D LTR MaLR 1 505 0 1933 158 0 29 chr2 202350394 202350710 -48337144 + AluJo SINE Alu 1 307 -5 379 292 82 6 chr2 202352089 202352260 -48335594 - LTR33 LTR ERVL -4 517 334 364 250 48 0 chr2 202352263 202352347 -48335507 - LTR16C LTR ERVL 0 491 404 2685 201 162 96 chr2 202352720 202353828 -48334026 + L1MC4 LINE L1 6452 7632 -410 2132 64 261 6 chr2 202353830 202354187 -48333667 + LTR7 LTR ERV1 1 448 -2 21256 85 8 22 chr2 202354189 202357226 -48330628 + HERVH LTR ERV1 1 2992 -4721 911 149 20 0 chr2 202357212 202357360 -48330494 + HERVH LTR ERV1 3140 3290 -4423 * 3512 92 6 6 chr2 202357350 202357851 -48330003 + HERVH LTR ERV1 3492 3992 -3721 4551 129 0 3 chr2 202357854 202358515 -48329339 + HERVH LTR ERV1 4488 5146 -2567 1349 148 18 5 chr2 202358519 202358736 -48329118 + HERVH LTR ERV1 5600 5819 -1894 2411 98 48 13 chr2 202358736 202359113 -48328741 + HERVH LTR ERV1 7324 7713 0 2776 78 98 5 chr2 202359113 202359523 -48328331 + LTR7 LTR ERV1 1 448 -2 425 280 100 0 chr2 202359545 202359695 -48328159 + L1MC4 LINE L1 7716 7880 -162 285 301 0 49 chr2 202410569 202410712 -48277142 + GA-rich Low_complexity Low_complexity 5 140 0 313 339 55 36 chr2 202410734 202411008 -48276846 + L1ME LINE L1 4428 4706 -1440 388 283 80 63 chr2 202411015 202411301 -48276553 + L1ME LINE L1 4770 5060 -1086 362 264 65 65 chr2 202411469 202411700 -48276154 + L1ME LINE L1 5099 5329 -817 395 290 16 0 chr2 202411924 202412048 -48275806 + L1ME LINE L1 5478 5603 -518 2410 141 37 37 chr2 202412211 202412699 -48275155 - Tigger5 DNA MER2_type 0 2323 1836 1119 217 0 0 chr2 202412697 202412918 -48274936 - Tigger5 DNA MER2_type -2102 221 1 * 2299 116 0 0 chr2 202412992 202413294 -48274560 - AluSx SINE Alu -10 302 1 1784 171 0 39 chr2 202413682 202413991 -48273863 - AluJb SINE Alu -15 297 1 1129 290 132 21 chr2 202414216 202414469 -48273385 - MLT1K LTR MaLR 0 588 365 2169 121 0 0 chr2 202414469 202414767 -48273087 + AluSx SINE Alu 2 299 -13 1129 290 132 21 chr2 202414767 202415034 -48272820 - MLT1K LTR MaLR -223 365 10 811 275 141 27 chr2 202415328 202415739 -48272115 + LTR33 LTR ERVL 43 500 -21 1673 164 64 0 chr2 202416085 202416365 -48271489 + AluJo SINE Alu 1 298 -14 1963 134 30 70 chr2 202416537 202416940 -48270914 + MLT1B LTR MaLR 4 390 0 479 165 52 0 chr2 202417845 202417960 -48269894 + AluSq/x SINE Alu 1 121 -191 229 275 0 25 chr2 202418832 202418912 -48268942 + GA-rich Low_complexity Low_complexity 3 80 0 401 184 92 53 chr2 202419109 202419315 -48268539 + MER113 DNA MER1_type? 44 257 -264 397 245 25 63 chr2 202419395 202419554 -48268300 + MER113 DNA MER1_type? 369 521 0 676 182 134 14 chr2 202419800 202420009 -48267845 + MER33 DNA MER1_type 21 254 -70 2178 188 48 4 chr2 202420015 202420499 -48267355 - L1MD3 LINE L1 -14 7981 7477 429 122 0 12 chr2 202420499 202420581 -48267273 + MER33 DNA MER1_type 283 363 0 945 238 36 36 chr2 202420704 202420956 -48266898 - MIR SINE MIR -2 260 9 2476 35 10 0 chr2 202420956 202421244 -48266610 - AluY SINE Alu -19 292 2 1725 122 106 26 chr2 202421281 202421593 -48266261 + MER1B DNA MER1_type 1 337 0 296 247 303 27 chr2 202421680 202421790 -48266064 - MIR SINE MIR -6 256 178 2545 70 0 3 chr2 202421790 202422103 -48265751 + AluSx SINE Alu 1 312 0 296 247 303 27 chr2 202422103 202422163 -48265691 - MIR SINE MIR -84 178 35 21 0 0 0 chr2 202423152 202423173 -48264681 + AT_rich Low_complexity Low_complexity 1 21 0 390 42 0 0 chr2 202423368 202423416 -48264438 + (TG)n Simple_repeat Simple_repeat 2 49 0 318 85 0 0 chr2 202424043 202424090 -48263764 + MADE1 DNA Mariner 5 51 -29 185 289 0 0 chr2 202424091 202424136 -48263718 - MIR SINE MIR -158 104 60 722 286 62 0 chr2 202424174 202424401 -48263453 - MIR SINE MIR -7 255 15 488 328 49 0 chr2 202424542 202424725 -48263129 - MIR SINE MIR -10 252 61 256 254 0 0 chr2 202424750 202424817 -48263037 + L1MC4a LINE L1 5846 5912 -1896 317 313 22 8 chr2 202425188 202425322 -48262532 + L1M4 LINE L1 4064 4199 -1947 2949 173 34 0 chr2 202425420 202425923 -48261931 - MLT2B1 LTR ERVL 0 520 1 5361 167 26 38 chr2 202426191 202427543 -48260311 - L1MC1 LINE L1 0 6333 5005 849 158 14 0 chr2 202427655 202427801 -48260053 - THE1C LTR MaLR -227 148 1 339 25 0 0 chr2 202427835 202427875 -48259979 + (CA)n Simple_repeat Simple_repeat 1 40 0 448 276 26 83 chr2 202427875 202428103 -48259751 - Charlie8 DNA MER1_type -2202 215 1 200 188 0 0 chr2 202428130 202428162 -48259692 + (CATA)n Simple_repeat Simple_repeat 3 34 0 474 255 170 21 chr2 202428173 202428330 -48259524 + MIR SINE MIR 47 238 -24 2579 43 3 3 chr2 202428330 202428632 -48259222 + AluY SINE Alu 1 302 -9 474 255 170 21 chr2 202428632 202428662 -48259192 + MIR SINE MIR 238 262 0 265 264 73 49 chr2 202429280 202429526 -48258328 + L1ME4a LINE L1 5846 6097 -24 246 311 82 0 chr2 202429782 202429904 -48257950 + LTR67 LTR ERVL 402 533 -24 21 0 0 0 chr2 202429906 202429927 -48257927 + AT_rich Low_complexity Low_complexity 1 21 0 2253 115 3 6 chr2 202430490 202430803 -48257051 + AluSx SINE Alu 1 312 0 235 319 158 19 chr2 202431093 202431236 -48256618 - MIR SINE MIR -79 129 19 306 270 95 50 chr2 202431712 202431912 -48255942 + L1M4 LINE L1 4656 4864 -1282 405 250 98 0 chr2 202431930 202432062 -48255792 - LTR67 LTR ERVL -11 546 402 393 367 39 5 chr2 202432382 202432589 -48255265 + L1M4 LINE L1 4852 5065 -1081 1068 328 103 43 chr2 202432867 202433372 -48254482 + L1M4 LINE L1 2366 2839 -3307 2085 119 3 3 chr2 202433372 202433665 -48254189 + AluSx SINE Alu 1 293 -19 1068 328 103 43 chr2 202433665 202434552 -48253302 + L1M4 LINE L1 2839 3841 -2305 255 200 18 0 chr2 202435146 202435201 -48252653 - L1 LINE L1 -1199 4947 4892 268 188 31 0 chr2 202435226 202435290 -48252564 - MER57A LTR ERV1 0 403 338 1314 153 20 24 chr2 202435419 202435668 -48252186 + L1MC1 LINE L1 6080 6327 -6 2285 89 3 0 chr2 202435677 202435968 -48251886 - AluY SINE Alu -19 292 1 29 0 0 0 chr2 202436004 202436033 -48251821 + AT_rich Low_complexity Low_complexity 1 29 0 217 308 79 51 chr2 202436303 202436517 -48251337 - L3b LINE CR1 -131 1452 1233 39 22 0 0 chr2 202436822 202436868 -48250986 + AT_rich Low_complexity Low_complexity 1 46 0 2687 193 52 52 chr2 202437253 202437340 -48250514 - L1 LINE L1 -1816 4330 4245 1543 108 129 12 chr2 202437340 202437581 -48250273 - AluSg1 SINE Alu 0 309 41 2687 193 52 52 chr2 202437581 202438210 -48249644 - L1 LINE L1 -1901 4245 3614 1390 258 118 21 chr2 202438610 202439076 -48248778 + MLT1J LTR MaLR 1 511 0 979 269 121 15 chr2 202439239 202439637 -48248217 + L2 LINE L2 1811 2250 -1064 446 218 14 70 chr2 202439630 202439772 -48248082 + L2 LINE L2 3180 3313 0 * 2009 86 21 0 chr2 202440764 202441044 -48246810 - L1PA10 LINE L1 -70 6098 5813 437 325 35 18 chr2 202441059 202441228 -48246626 - MIR3 SINE MIR -14 194 23 1587 246 42 73 chr2 202441366 202441938 -48245916 - MLT2B3 LTR ERVL 0 554 1 3901 59 14 45 chr2 202443978 202444487 -48243367 - L1PA8 LINE L1 0 6172 5680 203 255 0 0 chr2 202444534 202444581 -48243273 + GA-rich Low_complexity Low_complexity 4 50 0 209 233 0 0 chr2 202444584 202444627 -48243227 + T-rich Low_complexity Low_complexity 1 43 0 1213 143 0 6 chr2 202444897 202445079 -48242775 - FRAM SINE Alu -4 172 1 379 216 52 97 chr2 202445300 202445434 -48242420 + MER5B DNA MER1_type 1 128 -50 351 0 0 0 chr2 202445452 202445491 -48242363 + (TG)n Simple_repeat Simple_repeat 2 40 0 1762 165 7 0 chr2 202445491 202445770 -48242084 - AluJo SINE Alu -27 285 5 269 243 0 29 chr2 202445773 202445843 -48242011 - MER5B DNA MER1_type -110 68 1 487 255 58 24 chr2 202446089 202446294 -48241560 - MIR3 SINE MIR -53 209 7 442 268 163 0 chr2 202446366 202446519 -48241335 - MER5A DNA MER1_type -3 186 9 214 171 0 24 chr2 202446767 202446808 -48241046 + CT-rich Low_complexity Low_complexity 1 40 0 2075 147 0 0 chr2 202447006 202447306 -48240548 + AluSx SINE Alu 1 300 -12 209 283 87 43 chr2 202447408 202447500 -48240354 + MIR SINE MIR 21 116 -92 2249 94 3 7 chr2 202447519 202447816 -48240038 + AluSq SINE Alu 1 296 -17 190 195 0 49 chr2 202449074 202449115 -48238739 + L2 LINE L2 3202 3240 -32 210 71 0 0 chr2 202450509 202450537 -48237317 + (A)n Simple_repeat Simple_repeat 1 28 0 474 304 69 14 chr2 202450602 202450650 -48237204 + MIR SINE MIR 34 78 -184 1719 202 135 0 chr2 202450650 202450997 -48236857 + MSTD LTR MaLR 3 396 0 474 304 69 14 chr2 202450997 202451165 -48236689 + MIR SINE MIR 78 262 0 1468 216 7 0 chr2 202451238 202451525 -48236329 - AluJb SINE Alu -23 289 1 249 231 88 44 chr2 202452026 202452117 -48235737 - L2 LINE L2 -22 3291 3197 199 394 27 0 chr2 202454143 202454232 -48233622 - MIR SINE MIR -76 132 41 298 310 0 30 chr2 202455186 202455286 -48232568 - MIR3 SINE MIR -21 187 91 392 346 86 48 chr2 202455295 202455795 -48232059 - LTR33 LTR ERVL 0 521 3 403 164 309 9 chr2 202456026 202456136 -48231718 - MIR SINE MIR -7 255 113 1507 118 86 82 chr2 202456747 202457053 -48230801 + AluSx SINE Alu 5 311 0 1763 174 31 0 chr2 202457773 202458061 -48229793 - AluJb SINE Alu -15 297 1 377 261 23 11 chr2 202458228 202458316 -48229538 + MIR SINE MIR 20 108 -154 3302 70 70 0 chr2 202458711 202458750 -48229104 - MLT2A1 LTR ERVL 0 444 409 396 0 0 0 chr2 202458750 202458794 -48229060 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 3302 70 70 0 chr2 202458794 202459169 -48228685 - MLT2A1 LTR ERVL -35 409 1 308 305 29 0 chr2 202459750 202459855 -48227999 - L3 LINE CR1 -260 1317 1210 217 0 61 0 chr2 202460003 202460036 -48227818 + (CA)n Simple_repeat Simple_repeat 1 35 0 676 289 22 11 chr2 202461071 202461251 -48226603 + MIR SINE MIR 20 201 -61 2002 97 0 60 chr2 202461501 202461801 -48226053 - AluSx SINE Alu -30 282 1 273 371 40 8 chr2 202462528 202462652 -48225202 + MIR SINE MIR 23 150 -58 266 320 39 31 chr2 202462734 202462847 -48225007 + MER5A DNA MER1_type 45 169 -20 2222 120 10 0 chr2 202463141 202463450 -48224404 - AluSx SINE Alu 0 312 1 299 263 0 0 chr2 202465539 202465615 -48222239 + GA-rich Low_complexity Low_complexity 2 77 0 497 276 43 22 chr2 202465624 202465809 -48222045 - MER5A DNA MER1_type 0 189 1 26 0 0 0 chr2 202466459 202466485 -48221369 + AT_rich Low_complexity Low_complexity 1 26 0 339 25 0 0 chr2 202467020 202467060 -48220794 + (TA)n Simple_repeat Simple_repeat 2 41 0 323 212 12 0 chr2 202468126 202468211 -48219643 + GA-rich Low_complexity Low_complexity 2 87 0 322 320 186 12 chr2 202470021 202470193 -48217661 + MIR3 SINE MIR 5 206 -2 186 356 77 36 chr2 202470656 202470903 -48216951 + L2 LINE L2 2637 2893 -421 283 323 113 15 chr2 202473420 202473553 -48214301 - L2 LINE L2 -12 3260 3115 301 280 145 5 chr2 202473654 202473847 -48214007 + L2 LINE L2 2827 3046 -226 505 143 0 98 chr2 202473851 202473963 -48213891 - L1PA11 LINE L1 -1 6173 6073 234 354 127 53 chr2 202474043 202474422 -48213432 - L2 LINE L2 -11 3261 2855 1108 235 14 0 chr2 202474575 202474796 -48213058 - MER58A DNA MER1_type 0 224 1 2444 83 0 10 chr2 202474946 202475259 -48212595 - AluSq SINE Alu -2 311 2 538 266 31 0 chr2 202475280 202475408 -48212446 - MIR SINE MIR -83 179 48 342 284 193 30 chr2 202475429 202475626 -48212228 + MIR SINE MIR 21 249 -13 2258 237 75 34 chr2 202475998 202476801 -48211053 + L1MC4 LINE L1 7204 8039 -3 247 196 0 0 chr2 202476866 202476912 -48210942 - MIR SINE MIR -74 134 89 347 252 163 14 chr2 202477264 202477411 -48210443 + LTR33 LTR ERVL 350 518 -3 833 290 16 12 chr2 202477784 202478032 -48209822 + MIR SINE MIR 8 256 -6 2215 89 11 0 chr2 202479527 202479835 -48208019 + AluSx SINE Alu 1 311 0 309 209 30 0 chr2 202480147 202480214 -48207640 - MIR SINE MIR -57 151 83 510 301 68 23 chr2 202480901 202481077 -48206777 - MIR3 SINE MIR -23 185 2 2663 165 33 46 chr2 202481162 202481708 -48206146 + L1MB5 LINE L1 5622 6160 -14 222 277 12 12 chr2 202483063 202483146 -48204708 + GA-rich Low_complexity Low_complexity 2 84 0 202 331 110 52 chr2 202483850 202484004 -48203850 + MIR3 SINE MIR 37 199 -9 335 265 228 9 chr2 202484021 202484236 -48203618 + L1ME4a LINE L1 5859 6120 -1 594 281 99 35 chr2 202485477 202485790 -48202064 + MARNA DNA Mariner 72 404 -182 25 31 0 0 chr2 202487084 202487116 -48200738 + AT_rich Low_complexity Low_complexity 1 32 0 234 0 0 0 chr2 202487157 202487183 -48200671 + (TA)n Simple_repeat Simple_repeat 2 27 0 537 146 27 5 chr2 202487416 202487603 -48200251 + GA-rich Low_complexity Low_complexity 1 191 0 854 301 78 29 chr2 202487846 202488160 -48199694 - LTR16B LTR ERVL -32 432 92 1752 211 25 19 chr2 202488160 202488521 -48199333 + MLT1A1 LTR MaLR 3 365 0 854 301 78 29 chr2 202488521 202488618 -48199236 - LTR16B LTR ERVL -372 92 1 4327 314 59 34 chr2 202488740 202492192 -48195662 - ERVL LTR ERVL -385 5379 1719 2641 285 91 33 chr2 202492257 202493281 -48194573 - ERVL LTR ERVL -3571 1425 343 968 274 38 78 chr2 202493551 202493891 -48193963 - LTR16B LTR ERVL -14 450 131 1975 48 0 0 chr2 202493891 202494120 -48193734 + AluY SINE Alu 83 311 0 968 274 38 78 chr2 202494120 202494225 -48193629 - LTR16B LTR ERVL -333 131 23 2672 58 0 0 chr2 202494379 202494690 -48193164 - AluY SINE Alu 0 311 1 888 146 22 11 chr2 202494889 202495067 -48192787 + L1MA4 LINE L1 6120 6299 -1 750 116 0 89 chr2 202495124 202495234 -48192620 + AluJo SINE Alu 2 97 -215 2239 113 3 0 chr2 202495234 202495535 -48192319 + AluSp SINE Alu 1 302 -11 750 116 0 89 chr2 202495535 202495570 -48192284 + AluJo SINE Alu 97 134 -178 363 314 26 33 chr2 202498706 202498859 -48188995 - MER5A DNA MER1_type -35 154 3 477 315 50 80 chr2 202499644 202500144 -48187710 + L2 LINE L2 2589 3059 -213 1578 209 154 36 chr2 202500144 202500593 -48187261 + MLT1D LTR MaLR 2 503 -2 477 315 50 80 chr2 202500593 202500801 -48187053 + L2 LINE L2 3059 3272 0 349 295 35 58 chr2 202500926 202500996 -48186858 - MIR SINE MIR -13 249 179 2223 112 3 7 chr2 202500996 202501291 -48186563 - AluSq SINE Alu -19 294 1 349 295 35 58 chr2 202501291 202501393 -48186461 - MIR SINE MIR -83 179 81 256 310 55 28 chr2 202501384 202501529 -48186325 + L3 LINE CR1 1270 1418 -159 * 22 0 0 0 chr2 202502269 202502291 -48185563 + AT_rich Low_complexity Low_complexity 1 22 0 2854 217 52 14 chr2 202502529 202503220 -48184634 - L1ME1 LINE L1 -18 6148 5432 320 352 145 0 chr2 202503598 202503757 -48184097 + L2 LINE L2 2857 3038 -275 226 293 10 50 chr2 202503850 202503949 -48183905 + L2 LINE L2 3178 3272 0 764 344 68 22 chr2 202504762 202505290 -48182564 - L2 LINE L2 -1 3271 2729 1231 215 172 12 chr2 202505359 202505452 -48182402 + LTR50 LTR ERVL 1 78 -717 2528 99 19 11 chr2 202505452 202505827 -48182027 - L1PA11 LINE L1 0 6174 5797 1231 215 172 12 chr2 202505827 202506265 -48181589 + LTR50 LTR ERVL 78 730 -65 2375 88 7 0 chr2 202506265 202506560 -48181294 - AluSc SINE Alu -12 297 1 1231 215 172 12 chr2 202506560 202506639 -48181215 + LTR50 LTR ERVL 730 795 0 21 36 0 0 chr2 202507514 202507542 -48180312 + AT_rich Low_complexity Low_complexity 1 28 0 921 135 15 70 chr2 202507864 202508064 -48179790 + MER53 DNA DNA 1 189 0 2343 73 0 0 chr2 202508287 202508576 -48179278 + AluY SINE Alu 1 289 -22 21 57 0 0 chr2 202508853 202508888 -48178966 + AT_rich Low_complexity Low_complexity 1 35 0 184 243 0 0 chr2 202510162 202510199 -48177655 + L2 LINE L2 3193 3229 -43 650 258 43 0 chr2 202510199 202510362 -48177492 - MER63A DNA MER1_type -31 179 10 404 252 0 47 chr2 202510558 202510665 -48177189 - MIR SINE MIR -106 156 55 2312 174 97 47 chr2 202511273 202511390 -48176464 + MLT1E2 LTR MaLR 1 111 -515 2131 111 11 0 chr2 202511390 202511693 -48176161 - AluSx SINE Alu 0 307 2 2312 174 97 47 chr2 202511693 202512108 -48175746 + MLT1E2 LTR MaLR 111 561 -65 1331 150 0 77 chr2 202512116 202512362 -48175492 + AluJb SINE Alu 85 311 -1 579 128 15 90 chr2 202512369 202512440 -48175414 + MLT1E3 LTR MaLR 498 556 -68 2448 93 70 14 chr2 202512440 202512785 -48175069 - THE1B LTR MaLR 0 364 1 579 128 15 90 chr2 202512785 202512846 -48175008 + MLT1E3 LTR MaLR 556 620 -4 337 279 67 19 chr2 202514277 202514433 -48173421 - MIR3 SINE MIR -1 207 44 361 235 71 33 chr2 202514456 202514652 -48173202 + MIR SINE MIR 5 258 -4 196 288 17 0 chr2 202514732 202514791 -48173063 - L2 LINE L2 -7 3265 3206 1681 191 32 40 chr2 202515059 202515431 -48172423 - MLT1B LTR MaLR 0 390 22 369 267 160 27 chr2 202515450 202515712 -48172142 + L2 LINE L2 2011 2307 -1007 248 325 36 0 chr2 202515851 202515934 -48171920 + L2 LINE L2 3170 3255 -17 359 302 111 44 chr2 202516416 202516641 -48171213 + MIR SINE MIR 11 250 -12 22 35 0 0 chr2 202517310 202517339 -48170515 + AT_rich Low_complexity Low_complexity 1 29 0 847 254 113 97 chr2 202517706 202518245 -48169609 + LTR67 LTR ERVL 3 550 -7 1908 155 3 0 chr2 202518246 202518530 -48169324 + AluJo SINE Alu 19 303 -9 2507 79 0 0 chr2 202518797 202519101 -48168753 + AluY SINE Alu 1 304 -7 2163 134 3 10 chr2 202519566 202519880 -48167974 - AluSx SINE Alu 0 312 1 1827 229 42 14 chr2 202521012 202521439 -48166415 + MER21B LTR ERV1 317 755 -108 1612 193 53 24 chr2 202521626 202521831 -48166023 - MLT1B LTR MaLR 0 390 167 1977 91 15 11 chr2 202521831 202522096 -48165758 - AluSq SINE Alu -12 301 36 1612 193 53 24 chr2 202522096 202522269 -48165585 - MLT1B LTR MaLR -223 167 1 484 297 109 6 chr2 202522326 202522501 -48165353 - MIR3 SINE MIR 0 208 16 288 346 87 11 chr2 202523962 202524147 -48163707 - L2 LINE L2 -262 3051 2853 1759 176 0 20 chr2 202525232 202525533 -48162321 + AluJo SINE Alu 6 300 -12 1155 165 0 0 chr2 202526000 202526176 -48161678 + AluSg/x SINE Alu 134 309 -3 781 227 32 57 chr2 202526239 202526486 -48161368 - MIR SINE MIR -15 247 7 2972 161 67 16 chr2 202526996 202527567 -48160287 + L1MB4 LINE L1 5581 6180 0 812 234 71 102 chr2 202527608 202528130 -48159724 + MLT1J LTR MaLR 3 508 -3 251 265 50 50 chr2 202528589 202528770 -48159084 + L2 LINE L2 725 905 -2409 544 302 164 3 chr2 202528828 202529133 -48158721 + L1MC4a LINE L1 5571 5924 -1884 268 294 34 17 chr2 202529143 202529262 -48158592 + (CATATA)n Simple_repeat Simple_repeat 2 122 0 2189 107 0 13 chr2 202529446 202529746 -48158108 + AluSg SINE Alu 1 296 -14 753 181 190 28 chr2 202530023 202530239 -48157615 + LTR16C LTR ERVL 188 438 -53 1169 126 70 74 chr2 202530239 202530454 -48157400 + MLT1C LTR MaLR 175 465 -2 1320 175 0 21 chr2 202530454 202530694 -48157160 - MER46A DNA MER2_type 0 236 2 845 275 17 0 chr2 202530714 202530950 -48156904 - L2 LINE L2 -246 3067 2828 208 319 0 33 chr2 202531268 202531359 -48156495 + MIR SINE MIR 72 159 -103 330 350 20 0 chr2 202531417 202531614 -48156240 + L1M4 LINE L1 3750 3950 -2196 21 0 0 0 chr2 202532021 202532042 -48155812 + AT_rich Low_complexity Low_complexity 1 21 0 559 289 6 22 chr2 202532336 202532516 -48155338 - MER5B DNA MER1_type 0 178 2 198 0 0 0 chr2 202532614 202532636 -48155218 + (A)n Simple_repeat Simple_repeat 1 22 0 403 250 86 16 chr2 202532655 202532783 -48155071 + LTR37B LTR ERV1 18 154 -314 569 152 19 0 chr2 202532879 202532984 -48154870 + LTR37B LTR ERV1 198 304 -164 240 200 0 0 chr2 202532988 202533043 -48154811 + CT-rich Low_complexity Low_complexity 2 56 0 2158 129 0 0 chr2 202533072 202533366 -48154488 - AluSx SINE Alu -18 294 1 264 246 25 76 chr2 202533395 202533513 -48154341 + LTR37B LTR ERV1 349 460 -8 839 246 25 30 chr2 202533628 202533864 -48153990 + L1MEc LINE L1 26 260 -6136 2248 233 68 46 chr2 202533903 202534224 -48153630 + L1MEc LINE L1 611 923 -5473 1605 177 0 0 chr2 202534224 202534472 -48153382 + AluJb SINE Alu 1 248 -64 2248 233 68 46 chr2 202534472 202535001 -48152853 + L1MEc LINE L1 923 1480 -4916 445 158 110 24 chr2 202535224 202535351 -48152503 - MER96B DNA MER1_type? -39 378 241 807 182 0 0 chr2 202535549 202535681 -48152173 - FLAM_C SINE Alu -1 132 1 219 226 16 32 chr2 202536444 202536506 -48151348 + CT-rich Low_complexity Low_complexity 4 64 0 273 335 51 37 chr2 202536741 202536956 -48150898 + L2 LINE L2 2643 2860 -454 368 91 15 0 chr2 202536986 202537052 -48150802 + (CA)n Simple_repeat Simple_repeat 1 67 0 384 322 13 27 chr2 202537701 202537850 -48150004 + MIR3 SINE MIR 9 155 -53 183 291 0 22 chr2 202537872 202537967 -48149887 + MER5A DNA MER1_type 12 103 -76 37 86 0 0 chr2 202538154 202538247 -48149607 + AT_rich Low_complexity Low_complexity 1 93 0 2399 183 45 0 chr2 202538547 202539016 -48148838 - L1MB7 LINE L1 0 6184 5695 1732 199 39 25 chr2 202539021 202539459 -48148395 - L1M4c LINE L1 -4880 1766 1323 348 183 0 0 chr2 202539460 202539520 -48148334 - MLT1A1 LTR MaLR -2 363 304 1492 83 0 0 chr2 202539520 202539700 -48148154 + AluY SINE Alu 1 180 -131 487 54 0 0 chr2 202539700 202539756 -48148098 + AluY SINE Alu 227 308 0 202 39 0 0 chr2 202539756 202539782 -48148072 + (TAAA)n Simple_repeat Simple_repeat 2 92 0 450 176 24 0 chr2 202539783 202539868 -48147986 - MLT1A1 LTR MaLR -59 315 229 * 791 126 17 0 chr2 202539853 202539972 -48147882 - MLT1A1 LTR MaLR -244 121 1 1263 179 0 24 chr2 202539972 202540223 -48147631 - L1M4c LINE L1 -5208 1334 1090 401 242 22 0 chr2 202540277 202540368 -48147486 + L1M4 LINE L1 272 364 -6178 4125 215 56 28 chr2 202540374 202540680 -48147174 - L1M4c LINE L1 -5478 1064 768 2300 90 3 6 chr2 202540680 202540991 -48146863 - AluSp SINE Alu -3 310 1 4125 215 56 28 chr2 202540991 202541708 -48146146 - L1M4c LINE L1 -5774 768 13 484 296 44 56 chr2 202541857 202542045 -48145809 + LTR16C LTR ERVL 245 432 -59 2068 126 7 0 chr2 202542045 202542358 -48145496 + AluSx SINE Alu 1 315 0 484 296 44 56 chr2 202542358 202542418 -48145436 + LTR16C LTR ERVL 432 491 0 21 0 0 0 chr2 202543441 202543462 -48144392 + AT_rich Low_complexity Low_complexity 1 21 0 380 270 25 31 chr2 202544272 202544435 -48143419 - L1ME4a LINE L1 -1 6120 5959 257 238 16 0 chr2 202545144 202545207 -48142647 + L1MC5 LINE L1 7713 7776 -185 232 226 0 32 chr2 202545434 202545496 -48142358 + (CATATA)n Simple_repeat Simple_repeat 5 64 0 415 334 71 52 chr2 202545572 202545789 -48142065 - L1MC4a LINE L1 -1917 5891 5680 2419 88 0 3 chr2 202545789 202546096 -48141758 - AluY SINE Alu -5 306 1 415 334 71 52 chr2 202546096 202546453 -48141401 - L1MC4a LINE L1 -2128 5680 5306 1082 198 17 50 chr2 202546598 202546715 -48141139 - AluJo SINE Alu -80 232 125 2382 81 0 3 chr2 202546715 202547011 -48140843 + AluY SINE Alu 1 295 -16 1082 198 17 50 chr2 202547011 202547131 -48140723 - AluJo SINE Alu -187 125 3 306 146 0 0 chr2 202547310 202547360 -48140494 - Alu SINE Alu -256 44 1 369 299 147 29 chr2 202548402 202548606 -48139248 + LTR67 LTR ERVL 1 228 -329 962 264 169 22 chr2 202548718 202549162 -48138692 - MLT1J LTR MaLR -2 509 1 432 0 0 0 chr2 202550350 202550398 -48137456 + (CA)n Simple_repeat Simple_repeat 2 49 0 383 213 117 0 chr2 202550743 202550837 -48137017 + MIR SINE MIR 146 250 -12 2326 59 3 10 chr2 202550911 202551199 -48136655 + AluY SINE Alu 1 286 -25 204 40 0 0 chr2 202551199 202551224 -48136630 + (TA)n Simple_repeat Simple_repeat 2 26 0 195 42 0 0 chr2 202551625 202551649 -48136205 + (T)n Simple_repeat Simple_repeat 1 24 0 5449 108 147 94 chr2 202554248 202555766 -48132088 + pTR5 LTR ERV1 383 2438 0 2530 57 0 0 chr2 202555794 202556094 -48131760 - AluY SINE Alu -11 300 1 463 283 65 49 chr2 202556774 202556958 -48130896 + MER5A DNA MER1_type 3 189 0 32 26 0 0 chr2 202558200 202558239 -48129615 + AT_rich Low_complexity Low_complexity 1 39 0 836 112 0 0 chr2 202558247 202558354 -48129500 - U6 snRNA snRNA 0 107 1 183 257 14 57 chr2 202558394 202558464 -48129390 - L3 LINE CR1 -43 1534 1468 740 251 111 8 chr2 202558493 202558728 -48129126 + MIR SINE MIR 2 260 -2 660 271 57 24 chr2 202558755 202559002 -48128852 - L3 LINE CR1 -175 1402 1148 909 279 162 8 chr2 202559002 202559361 -48128493 + MLT1J2 LTR MaLR 1 414 -36 1934 152 7 3 chr2 202559361 202559658 -48128196 + AluJo SINE Alu 1 298 -14 273 191 0 167 chr2 202559658 202559709 -48128145 + MLT1I LTR MaLR 348 406 -3 653 288 10 102 chr2 202559718 202560013 -48127841 - L3 LINE CR1 -431 1146 879 231 279 198 23 chr2 202560029 202560201 -48127653 + MLT1I LTR MaLR 19 220 -189 259 277 20 50 chr2 202560233 202560334 -48127520 + MLT1J2 LTR MaLR 347 444 -6 245 231 0 0 chr2 202560340 202560392 -48127462 + LTR30 LTR ERV1 1 52 -670 868 113 302 6 chr2 202560392 202560551 -48127303 + LTR12 LTR ERV1 53 258 -456 291 290 10 0 chr2 202560551 202560651 -48127203 + LTR30 LTR ERV1 524 624 -98 703 160 59 0 chr2 202560651 202560770 -48127084 + LTR12 LTR ERV1 359 484 -230 883 253 65 47 chr2 202560843 202561141 -48126713 - L1ME3A LINE L1 0 6170 5879 2575 52 0 3 chr2 202561141 202561447 -48126407 - AluY SINE Alu -4 307 3 2344 56 14 0 chr2 202561457 202561743 -48126111 - AluY SINE Alu -21 290 1 883 253 65 47 chr2 202561743 202561816 -48126038 - L1ME3A LINE L1 -299 5871 5781 2247 264 45 60 chr2 202561816 202562489 -48125365 - L1ME3A LINE L1 -942 5204 4551 2045 111 0 21 chr2 202562489 202562778 -48125076 - AluSx SINE Alu -29 283 1 2247 264 45 60 chr2 202562778 202563160 -48124694 - L1ME3A LINE L1 -1595 4551 4165 866 336 86 35 chr2 202563169 202563329 -48124525 - L3 LINE CR1 -773 804 654 2501 57 0 0 chr2 202563329 202563626 -48124228 - AluY SINE Alu -14 297 1 866 336 86 35 chr2 202563626 202564072 -48123782 - L3 LINE CR1 -923 654 167 555 223 47 79 chr2 202564258 202564425 -48123429 - LTR33 LTR ERVL 0 521 361 1292 251 67 45 chr2 202564425 202564935 -48122919 - LTR33 LTR ERVL 0 521 1 555 223 47 79 chr2 202564935 202564982 -48122872 - LTR33 LTR ERVL -160 361 314 387 225 80 36 chr2 202565035 202565183 -48122671 - LTR33 LTR ERVL -306 215 19 210 284 32 53 chr2 202565458 202565553 -48122301 - L2 LINE L2 -2 3270 3178 872 310 13 0 chr2 202566436 202566675 -48121179 - LTR16B LTR ERVL -222 242 1 420 91 0 0 chr2 202567364 202567430 -48120424 + (ATG)n Simple_repeat Simple_repeat 3 68 0 250 333 0 0 chr2 202568123 202568222 -48119632 + L1M4 LINE L1 4233 4331 -1815 679 280 148 40 chr2 202568361 202569223 -48118631 + L1P5 LINE L1 4488 5459 -697 2185 85 0 0 chr2 202569223 202569494 -48118360 - AluSq SINE Alu -14 299 29 679 280 148 40 chr2 202569494 202569575 -48118279 + L1P5 LINE L1 5459 5530 -626 * 4791 160 78 65 chr2 202569569 202569809 -48118045 - L1MA10 LINE L1 -3 6331 6096 257 0 30 0 chr2 202569809 202569842 -48118012 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2224 74 7 3 chr2 202569842 202570125 -48117729 - AluY SINE Alu -27 284 1 4791 160 78 65 chr2 202570125 202570919 -48116935 - L1MA10 LINE L1 -238 6096 5314 2493 51 0 0 chr2 202570919 202571215 -48116639 + AluY SINE Alu 1 296 -15 4791 160 78 65 chr2 202571215 202571283 -48116571 - L1MA10 LINE L1 -1020 5314 5248 2847 19 0 0 chr2 202571283 202571595 -48116259 + L1PA2 LINE L1 5844 6155 0 4791 160 78 65 chr2 202571595 202571793 -48116061 - L1MA10 LINE L1 -1086 5248 5019 458 277 158 16 chr2 202571801 202572169 -48115685 + L1ME3A LINE L1 5532 5951 -219 234 314 97 0 chr2 202572589 202572713 -48115141 + MLT1L LTR MaLR 395 530 -85 2504 185 17 17 chr2 202572714 202573174 -48114680 - LOR1b LTR ERV1 0 461 2 1722 159 30 27 chr2 202573339 202573640 -48114214 - AluJb SINE Alu -8 304 3 2019 164 0 0 chr2 202573927 202574237 -48113617 + AluSx SINE Alu 3 312 0 273 29 0 0 chr2 202574503 202574537 -48113317 + (CA)n Simple_repeat Simple_repeat 2 35 0 258 293 53 0 chr2 202574626 202574701 -48113153 - MIR SINE MIR -75 187 109 195 333 15 15 chr2 202576800 202576866 -48110988 - L3 LINE CR1 -2 1575 1510 585 289 156 5 chr2 202576893 202577104 -48110750 + MIR SINE MIR 20 262 0 390 288 16 24 chr2 202577126 202577251 -48110603 - L3 LINE CR1 -86 1491 1368 482 308 118 35 chr2 202577579 202577894 -48109960 - LTR16C LTR ERVL 0 491 151 2232 139 150 5 chr2 202577912 202578286 -48109568 - MSTA LTR MaLR 0 428 1 356 230 135 115 chr2 202578304 202578652 -48109202 - MLT1I LTR MaLR -25 384 30 208 291 10 58 chr2 202579407 202579510 -48108344 - L3 LINE CR1 -220 1357 1260 19642 136 18 5 chr2 202579684 202581833 -48106021 + L1MA3 LINE L1 142 2342 -5223 2397 64 0 10 chr2 202581833 202582131 -48105723 + AluY SINE Alu 2 296 -15 19642 136 18 5 chr2 202582131 202582907 -48104947 + L1MA3 LINE L1 2342 3106 -4459 2237 84 26 29 chr2 202582907 202583217 -48104637 + AluY SINE Alu 1 309 -2 12536 140 21 10 chr2 202583221 202585514 -48102340 + L1MA3 LINE L1 4464 6810 -914 2167 98 0 0 chr2 202585514 202585789 -48102065 + AluSg SINE Alu 35 309 -1 12536 140 21 10 chr2 202585789 202586714 -48101140 + L1MA3 LINE L1 6810 7724 0 21 0 0 0 chr2 202586714 202586735 -48101119 + AT_rich Low_complexity Low_complexity 1 21 0 1119 110 6 25 chr2 202586840 202587003 -48100851 + AluSg/x SINE Alu 136 295 -15 2225 112 0 0 chr2 202587073 202587367 -48100487 + AluSq SINE Alu 1 294 -19 1516 70 0 0 chr2 202587856 202588041 -48099813 - AluSq SINE Alu -128 185 1 216 0 0 0 chr2 202588051 202588075 -48099779 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1277 187 54 32 chr2 202588078 202588356 -48099498 + Zaphod DNA AcHobo 2417 2700 -1331 1518 200 62 29 chr2 202588370 202588710 -48099144 + MLT1A1 LTR MaLR 14 364 -1 1637 138 4 4 chr2 202588716 202588956 -48098898 + AluSq SINE Alu 51 290 -23 2269 85 4 0 chr2 202588966 202589290 -48098564 + AluY SINE Alu 1 325 0 349 225 101 0 chr2 202589342 202589431 -48098423 - L1ME3A LINE L1 -27 6143 6046 1039 232 100 10 chr2 202589432 202589721 -48098133 + Zaphod DNA AcHobo 3717 4031 0 485 256 84 37 chr2 202589876 202590067 -48097787 + L2 LINE L2 3112 3311 -2 304 261 39 94 chr2 202590080 202590283 -48097571 + L2 LINE L2 2217 2408 -906 2266 105 0 7 chr2 202590325 202590631 -48097223 + AluY SINE Alu 1 304 -7 219 367 0 0 chr2 202590762 202590841 -48097013 + L2 LINE L2 2668 2746 -568 346 242 107 39 chr2 202590866 202591044 -48096810 + HAL1 LINE L1 2241 2430 -77 41 36 0 0 chr2 202591092 202591147 -48096707 + AT_rich Low_complexity Low_complexity 1 55 0 640 299 116 74 chr2 202591211 202591632 -48096222 + L2 LINE L2 2833 3271 -1 781 291 31 9 chr2 202591740 202592059 -48095795 + L1MC/D LINE L1 5310 5635 -2173 2277 71 32 0 chr2 202592527 202592810 -48095044 - AluSg SINE Alu -18 292 1 1980 136 13 7 chr2 202593018 202593320 -48094534 + AluSx SINE Alu 1 304 -8 549 266 112 27 chr2 202593660 202593749 -48094105 - MLT1L LTR MaLR -8 605 525 441 36 0 0 chr2 202593749 202593804 -48094050 + (GGAA)n Simple_repeat Simple_repeat 1 55 0 549 266 112 27 chr2 202593804 202594012 -48093842 - MLT1L LTR MaLR -88 525 336 2074 117 9 38 chr2 202594012 202594329 -48093525 + AluSx SINE Alu 1 308 -4 549 266 112 27 chr2 202594329 202594519 -48093335 - MLT1L LTR MaLR -277 336 46 22 56 0 0 chr2 202594566 202594602 -48093252 + AT_rich Low_complexity Low_complexity 1 36 0 195 162 0 0 chr2 202594737 202594774 -48093080 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 2098 129 30 108 chr2 202595338 202595803 -48092051 - MSTB1 LTR MaLR 0 432 4 433 284 154 0 chr2 202596159 202596328 -48091526 - MER91A DNA MER1_type 0 196 2 2420 70 3 22 chr2 202596991 202597304 -48090550 + AluY SINE Alu 1 307 -4 1944 119 0 44 chr2 202597422 202597715 -48090139 + AluSx SINE Alu 1 280 -32 21 0 0 0 chr2 202597715 202597736 -48090118 + AT_rich Low_complexity Low_complexity 1 21 0 1549 228 15 6 chr2 202598003 202598341 -48089513 + MER58B DNA MER1_type 1 341 0 255 402 8 0 chr2 202598537 202598654 -48089200 + L2 LINE L2 3154 3271 -1 1190 161 16 5 chr2 202599799 202599985 -48087869 - AluJo SINE Alu -124 188 1 444 19 0 0 chr2 202600824 202600877 -48086977 + (TG)n Simple_repeat Simple_repeat 1 53 0 972 258 226 0 chr2 202601440 202601777 -48086077 - L2 LINE L2 0 3313 2901 270 330 31 0 chr2 202603450 202603547 -48084307 - L2 LINE L2 -34 3279 3180 261 361 101 0 chr2 202603556 202603675 -48084179 - MIR SINE MIR -112 150 20 1927 116 29 0 chr2 202604313 202604620 -48083234 - AluSx SINE Alu 0 315 1 906 277 204 10 chr2 202606534 202607014 -48080840 + L2 LINE L2 1901 2473 -841 713 140 35 0 chr2 202607033 202607147 -48080707 + MER20 DNA MER1_type 32 149 -70 21 0 0 0 chr2 202608525 202608546 -48079308 + AT_rich Low_complexity Low_complexity 1 21 0 221 371 38 19 chr2 202611125 202611230 -48076624 + MIR SINE MIR 17 123 -85 479 246 27 60 chr2 202611314 202611497 -48076357 + MER5B DNA MER1_type 1 177 -1 263 337 157 0 chr2 202612135 202612218 -48075636 - MIR SINE MIR -95 113 18 2346 75 0 34 chr2 202612244 202612377 -48075477 + AluY SINE Alu 1 137 -174 2361 66 7 0 chr2 202612377 202612666 -48075188 + AluY SINE Alu 1 291 -20 2346 75 0 34 chr2 202612666 202612677 -48075177 + AluY SINE Alu 137 147 -164 203 61 30 0 chr2 202612677 202612710 -48075144 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2346 75 0 34 chr2 202612710 202612885 -48074969 + AluY SINE Alu 147 310 -1 357 24 0 0 chr2 202612885 202612927 -48074927 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 2130 141 0 7 chr2 202614126 202614431 -48073423 - AluSx SINE Alu -9 303 1 182 419 14 0 chr2 202614769 202614843 -48073011 + L2 LINE L2 3149 3223 -49 200 329 85 37 chr2 202614885 202614967 -48072887 - MIR SINE MIR -140 122 37 2306 88 7 3 chr2 202615043 202615348 -48072506 - AluSp SINE Alu -7 306 1 818 136 0 16 chr2 202615671 202615796 -48072058 + FLAM_C SINE Alu 1 123 -20 322 215 0 46 chr2 202615844 202615909 -48071945 - MER5B DNA MER1_type -48 130 69 4495 159 37 26 chr2 202615940 202616845 -48071009 - L1MB7 LINE L1 -2 6182 5262 1777 137 11 0 chr2 202616845 202617108 -48070746 - AluSx SINE Alu -3 309 44 4495 159 37 26 chr2 202617108 202617190 -48070664 - L1MB7 LINE L1 -922 5262 5182 575 219 89 41 chr2 202617239 202617408 -48070446 + MER5B DNA MER1_type 2 178 0 247 285 146 48 chr2 202618546 202618711 -48069143 - L2 LINE L2 -88 3184 3004 210 373 8 34 chr2 202618951 202619069 -48068785 - L2 LINE L2 -486 2828 2714 358 360 29 7 chr2 202620687 202620826 -48067028 - MIR3 SINE MIR -63 145 4 332 223 39 85 chr2 202621038 202621168 -48066686 - MIR3 SINE MIR -25 183 60 461 264 209 0 chr2 202622557 202622705 -48065149 + MER8 DNA MER2_type 1 179 -60 320 229 0 0 chr2 202622682 202622743 -48065111 + MER2 DNA MER2_type 284 344 -1 * 429 266 81 42 chr2 202622749 202623008 -48064846 - LTR33 LTR ERVL 0 521 253 1809 152 0 52 chr2 202623210 202623519 -48064335 + AluJo SINE Alu 1 293 -19 215 345 71 0 chr2 202624381 202624494 -48063360 - L2 LINE L2 -649 2665 2545 195 342 9 18 chr2 202624626 202624740 -48063114 - L2 LINE L2 -996 2318 2206 21 57 0 0 chr2 202625170 202625205 -48062649 + AT_rich Low_complexity Low_complexity 1 35 0 316 244 0 26 chr2 202625692 202625770 -48062084 - MIR3 SINE MIR -25 183 108 180 0 0 0 chr2 202626448 202626468 -48061386 + (CA)n Simple_repeat Simple_repeat 2 21 0 * 405 39 0 0 chr2 202626467 202626518 -48061336 + (TC)n Simple_repeat Simple_repeat 1 51 0 884 206 85 48 chr2 202627288 202627536 -48060318 + MIR SINE MIR 1 257 -5 514 293 108 56 chr2 202627679 202627911 -48059943 - L2 LINE L2 -1 3271 3028 2229 136 0 0 chr2 202628133 202628443 -48059411 - AluSx SINE Alu -2 310 1 237 214 0 0 chr2 202631028 202631070 -48056784 + (CA)n Simple_repeat Simple_repeat 1 42 0 1810 121 71 7 chr2 202631228 202631508 -48056346 - AluSx SINE Alu -14 298 1 509 333 12 0 chr2 202632539 202632701 -48055153 + MIR SINE MIR 6 169 -93 607 271 33 17 chr2 202632940 202633121 -48054733 - MIR SINE MIR -48 214 31 201 74 0 0 chr2 202633160 202633187 -48054667 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 843 138 0 0 chr2 202633210 202633326 -48054528 + FLAM_C SINE Alu 1 116 -27 180 0 0 0 chr2 202633333 202633353 -48054501 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1850 155 30 3 chr2 202634053 202634357 -48053497 + AluSx SINE Alu 1 312 0 1125 80 17 6 chr2 202634376 202634551 -48053303 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 195 222 0 0 chr2 202634552 202634597 -48053257 + GA-rich Low_complexity Low_complexity 1 45 0 306 250 88 7 chr2 202635273 202635409 -48052445 - L1ME4a LINE L1 0 6121 5975 443 210 84 6 chr2 202635488 202635655 -48052199 - L1ME4a LINE L1 -252 5869 5690 292 229 0 0 chr2 202636164 202636225 -48051629 + L3b LINE CR1 1218 1278 -305 326 317 0 0 chr2 202636291 202636373 -48051481 - MIR3 SINE MIR -46 162 81 404 211 77 0 chr2 202636665 202636769 -48051085 - MIR SINE MIR -48 214 103 3263 189 19 1 chr2 202636786 202637517 -48050337 + L1 LINE L1 4608 5351 -795 7938 86 11 1 chr2 202637522 202639440 -48048414 - L1PA8 LINE L1 0 6172 4241 2727 42 7 96 chr2 202639440 202639521 -48048333 - L1PA8 LINE L1 -339 5833 5746 2389 103 0 0 chr2 202639521 202639823 -48048031 - AluSp SINE Alu -11 302 1 2727 42 7 96 chr2 202639823 202640169 -48047685 - L1PA8 LINE L1 -426 5746 5444 10598 99 6 8 chr2 202640216 202641103 -48046751 - L1PA8 LINE L1 -1906 4240 3352 2464 74 0 0 chr2 202641103 202641400 -48046454 - AluY SINE Alu -14 297 1 10598 99 6 8 chr2 202641400 202642830 -48045024 - L1PA8 LINE L1 -2794 3352 1925 2929 122 13 4 chr2 202642830 202643282 -48044572 + L1P4 LINE L1 5336 5791 -365 237 65 0 0 chr2 202643304 202643335 -48044519 + (CA)n Simple_repeat Simple_repeat 2 32 0 275 136 121 0 chr2 202643377 202643443 -48044411 + L1P4 LINE L1 5782 5855 -311 * 2108 129 28 28 chr2 202643439 202643774 -48044080 + L1PB4 LINE L1 5782 6119 -37 2469 77 3 0 chr2 202643774 202644072 -48043782 + AluSp SINE Alu 1 299 -14 2108 129 28 28 chr2 202644072 202644099 -48043755 + L1PB4 LINE L1 6118 6144 -12 180 0 0 0 chr2 202644650 202644670 -48043184 + (CA)n Simple_repeat Simple_repeat 2 21 0 361 235 98 38 chr2 202644790 202644922 -48042932 + L2 LINE L2 3173 3312 -1 208 135 27 0 chr2 202645455 202645492 -48042362 + MIR SINE MIR 117 154 -108 635 301 41 0 chr2 202646385 202646604 -48041250 - MIR SINE MIR -3 259 32 2409 82 3 3 chr2 202647093 202647397 -48040457 + AluY SINE Alu 1 304 -7 255 281 132 82 chr2 202649229 202649536 -48038318 - L2 LINE L2 -191 3081 2749 316 321 0 9 chr2 202649608 202649717 -48038137 + MER117 DNA MER1_type 4 111 -86 1743 118 42 0 chr2 202650714 202651039 -48036815 - L1P4 LINE L1 -624 5541 5200 2101 146 84 47 chr2 202651823 202652055 -48035799 - Charlie4a DNA MER1_type -1458 503 281 2312 80 14 0 chr2 202652055 202652344 -48035510 - AluY SINE Alu -18 293 1 2101 146 84 47 chr2 202652344 202652596 -48035258 - Charlie4a DNA MER1_type -1680 281 1 243 103 0 0 chr2 202652651 202652690 -48035164 + (CA)n Simple_repeat Simple_repeat 1 39 0 490 238 37 90 chr2 202653370 202653494 -48034360 + L2 LINE L2 3083 3189 -124 2180 130 0 3 chr2 202653494 202653795 -48034059 - AluSx SINE Alu -12 300 1 490 238 37 90 chr2 202653795 202653914 -48033940 + L2 LINE L2 3189 3313 0 422 214 86 21 chr2 202655372 202655549 -48032305 + MLT1J LTR MaLR 167 444 -67 564 270 37 18 chr2 202655736 202655899 -48031955 - MLT1J LTR MaLR -31 480 315 292 261 33 43 chr2 202655895 202655987 -48031867 - MLT1J LTR MaLR -420 91 1 * 243 0 0 0 chr2 202657192 202657219 -48030635 + (CA)n Simple_repeat Simple_repeat 1 27 0 622 254 32 43 chr2 202657678 202657863 -48029991 + MIR SINE MIR 17 199 -63 2104 149 0 0 chr2 202658277 202658572 -48029282 + AluSx SINE Alu 1 295 -17 2366 98 7 0 chr2 202658951 202659258 -48028596 + AluSc SINE Alu 1 309 0 1293 265 90 31 chr2 202659264 202659751 -48028103 + LTR33 LTR ERVL 2 517 -4 2491 70 3 0 chr2 202660082 202660381 -48027473 + AluSp SINE Alu 1 300 -13 1590 167 40 30 chr2 202660681 202660981 -48026873 + AluJo SINE Alu 1 303 -9 770 289 227 13 chr2 202661330 202661862 -48025992 + L2 LINE L2 583 1228 -2086 2250 99 0 20 chr2 202662243 202662547 -48025307 + AluSg SINE Alu 1 298 -12 478 231 83 52 chr2 202662831 202663060 -48024794 - MER106A DNA MER1_type 0 236 1 2476 92 0 6 chr2 202663211 202663525 -48024329 - AluSx SINE Alu 0 312 1 214 171 0 0 chr2 202663528 202663569 -48024285 + CT-rich Low_complexity Low_complexity 3 43 0 369 325 19 32 chr2 202664746 202664900 -48022954 + L2 LINE L2 3121 3272 0 190 310 28 14 chr2 202665075 202665146 -48022708 - L2 LINE L2 -90 3182 3111 222 345 0 0 chr2 202665357 202665412 -48022442 + L2 LINE L2 3002 3056 -257 477 277 0 31 chr2 202665451 202665581 -48022273 + L2 LINE L2 3142 3267 -5 233 250 0 0 chr2 202666783 202666835 -48021019 + LTR30 LTR ERV1 1 52 -670 621 122 18 195 chr2 202666839 202667067 -48020787 + LTR12 LTR ERV1 100 269 -445 386 163 20 7 chr2 202667068 202667155 -48020699 + LTR30 LTR ERV1 556 623 -99 348 127 0 0 chr2 202667159 202667214 -48020640 + (A)n Simple_repeat Simple_repeat 1 55 0 778 105 32 0 chr2 202667546 202667670 -48020184 + L1MA8 LINE L1 6156 6283 -8 381 307 71 68 chr2 202668444 202668552 -48019302 - L2 LINE L2 -1071 2243 2137 2358 101 0 3 chr2 202668552 202668859 -48018995 + AluSg SINE Alu 1 306 -4 381 307 71 68 chr2 202668859 202669131 -48018723 - L2 LINE L2 -1177 2137 1862 406 317 46 57 chr2 202669361 202669472 -48018382 + L1MEd LINE L1 270 381 -5738 932 174 68 63 chr2 202669472 202669539 -48018315 - MER3 DNA MER1_type 0 209 144 2075 118 21 4 chr2 202669539 202669853 -48018001 + AluSx SINE Alu 1 319 0 932 174 68 63 chr2 202669853 202669991 -48017863 - MER3 DNA MER1_type -65 144 2 406 317 46 57 chr2 202669991 202670337 -48017517 + L1MEd LINE L1 381 722 -5397 271 88 0 0 chr2 202670357 202670391 -48017463 + L1M1 LINE L1 5523 5556 -748 1715 207 86 55 chr2 202670399 202670912 -48016942 + L1ME3A LINE L1 5618 6146 -24 2183 116 0 0 chr2 202671110 202671403 -48016451 - AluSq SINE Alu -20 293 1 263 250 59 40 chr2 202671570 202671722 -48016132 + L1MEd LINE L1 2116 2270 -3859 3564 77 0 0 chr2 202671727 202672171 -48015683 - MLT2A1 LTR ERVL 0 444 1 2583 48 3 10 chr2 202672935 202673246 -48014608 - AluY SINE Alu -2 309 1 1509 194 0 59 chr2 202673246 202673566 -48014288 - AluJo SINE Alu -11 301 1 234 0 0 0 chr2 202674055 202674081 -48013773 + (TA)n Simple_repeat Simple_repeat 2 27 0 2105 120 0 7 chr2 202674081 202674373 -48013481 - AluSg SINE Alu -20 290 1 2237 106 0 0 chr2 202674714 202675024 -48012830 + AluSx SINE Alu 1 310 0 724 186 5 139 chr2 202675280 202675360 -48012494 + MER5A DNA MER1_type 1 90 -99 2331 85 3 35 chr2 202675360 202675464 -48012390 + L1PA8A LINE L1 5802 5908 -223 2186 124 3 0 chr2 202675464 202675762 -48012092 + AluSx SINE Alu 1 299 -13 2331 85 3 35 chr2 202675762 202675997 -48011857 + L1PA8A LINE L1 5908 6130 -1 724 186 5 139 chr2 202675997 202676131 -48011723 + MER5A DNA MER1_type 90 186 -3 559 230 158 0 chr2 202676147 202676299 -48011555 + MER5A DNA MER1_type 11 186 -3 2233 108 3 0 chr2 202676342 202676637 -48011217 + AluSx SINE Alu 1 296 -16 453 367 53 0 chr2 202676685 202676854 -48011000 - MIR SINE MIR -70 192 15 227 179 0 54 chr2 202677063 202677119 -48010735 + L2 LINE L2 3261 3313 0 2022 123 3 7 chr2 202677837 202678161 -48009693 - AluSx SINE Alu 0 323 1 243 0 0 0 chr2 202678503 202678530 -48009324 + (A)n Simple_repeat Simple_repeat 1 27 0 25 0 0 0 chr2 202679184 202679209 -48008645 + AT_rich Low_complexity Low_complexity 1 25 0 1838 173 0 3 chr2 202679375 202679670 -48008184 + AluJo SINE Alu 1 294 -18 341 300 259 11 chr2 202680637 202680907 -48006947 + L2 LINE L2 2163 2499 -815 1878 122 7 15 chr2 202680923 202681194 -48006660 - AluSx SINE Alu -8 304 36 2372 86 13 0 chr2 202681194 202681496 -48006358 - AluSg SINE Alu -3 307 1 2388 90 3 0 chr2 202682125 202682424 -48005430 + AluSx SINE Alu 1 300 -12 209 315 114 43 chr2 202682457 202682666 -48005188 - L2 LINE L2 -188 3084 2852 2142 113 3 7 chr2 202682666 202682967 -48004887 + AluSq SINE Alu 1 300 -13 209 315 114 43 chr2 202682967 202683011 -48004843 - L2 LINE L2 -420 2852 2813 263 141 42 113 chr2 202683032 202683103 -48004751 - MLT1H LTR MaLR 0 549 484 1011 153 0 0 chr2 202683103 202683253 -48004601 + AluJb SINE Alu 137 286 -26 401 283 145 77 chr2 202683255 202683711 -48004143 - MLT1H LTR MaLR -62 487 1 181 331 58 43 chr2 202683743 202683882 -48003972 + L2 LINE L2 3132 3272 0 1462 274 99 30 chr2 202684478 202684524 -48003330 + L2 LINE L2 2429 2470 -843 2332 104 3 0 chr2 202684524 202684823 -48003031 - AluSx SINE Alu -12 300 1 1462 274 99 30 chr2 202684823 202685591 -48002263 + L2 LINE L2 2470 3308 -5 2290 103 3 0 chr2 202685978 202686280 -48001574 - AluY SINE Alu -8 303 1 2052 132 30 0 chr2 202686553 202686856 -48000998 - AluSx SINE Alu 0 312 1 2218 71 4 0 chr2 202687124 202687390 -48000464 + AluY SINE Alu 33 299 -12 333 95 48 16 chr2 202687670 202687733 -48000121 + MER115 DNA AcHobo 600 664 -29 2381 99 0 3 chr2 202688430 202688732 -47999122 - AluSx SINE Alu -11 301 1 353 349 14 5 chr2 202689319 202689564 -47998290 + AluSc SINE Alu 80 326 0 250 364 95 25 chr2 202689564 202689776 -47998078 - L2 LINE L2 -1668 1646 1450 2004 127 10 3 chr2 202689776 202690076 -47997778 - AluSq SINE Alu -11 302 1 250 364 95 25 chr2 202690076 202690294 -47997560 - L2 LINE L2 -1864 1450 1186 335 279 79 28 chr2 202690809 202690889 -47996965 + L2 LINE L2 1797 1871 -1443 2061 126 7 0 chr2 202690889 202691182 -47996672 + AluSx SINE Alu 1 295 -17 335 279 79 28 chr2 202691182 202691316 -47996538 + L2 LINE L2 1871 2022 -1292 1356 290 46 17 chr2 202691433 202691943 -47995911 + MER115 DNA AcHobo 45 616 -77 981 157 11 6 chr2 202692056 202692234 -47995620 - L1MB3 LINE L1 0 6183 6005 672 157 182 0 chr2 202692241 202692362 -47995492 + FRAM SINE Alu 7 149 -27 204 40 0 0 chr2 202692362 202692387 -47995467 + (CA)n Simple_repeat Simple_repeat 2 26 0 1371 146 29 36 chr2 202692392 202692667 -47995187 - L1MB3 LINE L1 -171 6012 5740 1515 96 195 20 chr2 202693094 202693345 -47994509 - AluSg1 SINE Alu -14 295 1 740 292 37 4 chr2 202694164 202694407 -47993447 + MIR SINE MIR 2 252 -10 2403 88 0 0 chr2 202695010 202695306 -47992548 + AluSc SINE Alu 1 296 -13 1691 181 7 7 chr2 202696030 202696338 -47991516 - AluSx SINE Alu 0 308 1 1100 40 0 0 chr2 202696664 202696789 -47991065 - AluY SINE Alu -116 195 71 6520 111 205 88 chr2 202696789 202698307 -47989547 + pTR5 LTR ERV1 743 2438 0 512 96 0 0 chr2 202698310 202698383 -47989471 - AluY SINE Alu -237 74 2 6735 108 40 11 chr2 202698439 202699059 -47988795 + L1MA2 LINE L1 5024 5624 -680 2425 66 3 31 chr2 202699059 202699377 -47988477 + AluY SINE Alu 1 309 -2 6735 108 40 11 chr2 202699377 202700005 -47987849 + L1MA2 LINE L1 5624 6304 0 277 159 0 23 chr2 202700027 202700071 -47987783 + Alu SINE Alu 1 43 -258 2160 111 14 0 chr2 202701439 202701736 -47986118 + AluSq SINE Alu 1 301 -12 578 254 15 40 chr2 202702065 202702266 -47985588 + MIR SINE MIR 2 197 -65 2335 97 10 0 chr2 202702273 202702573 -47985281 + AluSp SINE Alu 1 303 -10 2280 106 3 10 chr2 202702851 202703162 -47984692 - AluSx SINE Alu -3 309 1 592 289 65 24 chr2 202703607 202703853 -47984001 - MIR SINE MIR -3 259 4 391 279 41 28 chr2 202703860 202704042 -47983812 - MIR SINE MIR -4 258 73 2293 71 10 3 chr2 202704302 202704596 -47983258 - AluY SINE Alu -15 296 1 462 30 0 15 chr2 202704833 202704899 -47982955 - AluY SINE Alu -8 304 240 1391 160 4 4 chr2 202704973 202705198 -47982656 - AluJo SINE Alu -87 225 1 2282 108 0 3 chr2 202705923 202706228 -47981626 - AluSg1 SINE Alu -5 304 1 243 0 0 0 chr2 202706817 202706844 -47981010 + (TA)n Simple_repeat Simple_repeat 2 28 0 474 256 98 6 chr2 202706908 202707072 -47980782 - MIR SINE MIR -38 224 46 227 114 23 0 chr2 202707631 202707675 -47980179 + (TA)n Simple_repeat Simple_repeat 1 45 0 463 242 120 51 chr2 202707797 202708186 -47979668 + L1MC4a LINE L1 5710 6121 0 21 0 0 0 chr2 202708238 202708259 -47979595 + AT_rich Low_complexity Low_complexity 1 21 0 1371 219 141 58 chr2 202708395 202709389 -47978465 + LTR28 LTR ERV1 1 635 -1 2015 38 144 0 chr2 202709835 202710098 -47977756 - AluY SINE Alu 0 301 1 1865 135 14 14 chr2 202710559 202710856 -47976998 - AluSg SINE Alu -13 297 1 2530 73 0 6 chr2 202711228 202711543 -47976311 - AluSp SINE Alu 0 313 1 734 154 8 24 chr2 202711707 202711830 -47976024 + FLAM_A SINE Alu 1 121 -12 188 309 37 37 chr2 202711958 202712039 -47975815 + MIR SINE MIR 34 114 -148 1946 112 7 27 chr2 202712430 202712726 -47975128 - AluSg SINE Alu -19 291 2 182 185 0 74 chr2 202712831 202712885 -47974969 - L2 LINE L2 0 3272 3223 421 230 100 0 chr2 202713150 202713250 -47974604 + MIR SINE MIR 43 152 -110 1796 99 11 29 chr2 202713260 202713533 -47974321 + AluSg SINE Alu 6 273 -37 287 164 66 0 chr2 202713533 202713594 -47974260 + Alu SINE Alu 236 300 0 2128 84 22 0 chr2 202713633 202713940 -47973914 - AluSc SINE Alu 0 313 1 2286 113 3 0 chr2 202714133 202714444 -47973410 - AluSx SINE Alu 0 312 1 1092 160 16 0 chr2 202714932 202715120 -47972734 + L1PA10 LINE L1 5973 6163 -5 1954 133 11 0 chr2 202715491 202715769 -47972085 + AluSx SINE Alu 1 281 -31 198 0 0 0 chr2 202715772 202715794 -47972060 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 2150 87 21 7 chr2 202716580 202716867 -47970987 + AluSc SINE Alu 1 291 -18 291 270 61 9 chr2 202716901 202717016 -47970838 + L1ME4a LINE L1 5960 6080 -41 1785 136 8 4 chr2 202717115 202717379 -47970475 + AluSp SINE Alu 37 301 -12 307 211 0 101 chr2 202717479 202717588 -47970266 - MER103 DNA DNA -62 104 7 2504 46 0 40 chr2 202718555 202718878 -47968976 - AluY SINE Alu -1 310 1 2166 159 6 0 chr2 202718984 202719330 -47968524 - MER7A DNA MER2_type 0 346 1 1865 183 51 46 chr2 202719909 202720053 -47967801 + MLT1C LTR MaLR 34 176 -291 2352 73 7 0 chr2 202720053 202720340 -47967514 + AluSg SINE Alu 1 289 -21 1865 183 51 46 chr2 202720340 202720627 -47967227 + MLT1C LTR MaLR 176 467 0 361 299 103 43 chr2 202720659 202720893 -47966961 - L2 LINE L2 -6 3266 3019 2097 86 72 0 chr2 202720900 202721179 -47966675 - AluSp SINE Alu -14 299 1 580 269 109 47 chr2 202721671 202721724 -47966130 - L1ME4a LINE L1 -38 6083 6035 2302 53 46 0 chr2 202721724 202722008 -47965846 + AluY SINE Alu 1 297 -14 580 269 109 47 chr2 202722008 202722292 -47965562 - L1ME4a LINE L1 -86 6035 5725 1506 169 34 130 chr2 202722940 202723354 -47964500 - MLT1A2 LTR MaLR 0 374 1 852 223 38 68 chr2 202723780 202723803 -47964051 + MER46C DNA MER2_type 82 104 -234 1530 238 70 41 chr2 202723803 202724290 -47963564 - MLT1D LTR MaLR 0 505 5 852 223 38 68 chr2 202724290 202724438 -47963416 + MER46C DNA MER2_type 104 245 -93 2171 108 7 7 chr2 202724438 202724735 -47963119 - AluSx SINE Alu -15 297 1 852 223 38 68 chr2 202724735 202724827 -47963027 + MER46C DNA MER2_type 245 338 0 286 292 79 0 chr2 202725392 202725481 -47962373 + MIR SINE MIR 129 224 -38 2358 53 17 3 chr2 202725593 202725892 -47961962 - AluY SINE Alu -8 303 1 2140 122 10 0 chr2 202725892 202726195 -47961659 - AluSx SINE Alu -6 306 1 206 326 127 28 chr2 202726653 202726834 -47961020 + L2 LINE L2 237 435 -2879 2107 139 3 10 chr2 202726970 202727280 -47960574 + AluSq SINE Alu 1 308 -5 2313 96 13 0 chr2 202727285 202727587 -47960267 + AluSp SINE Alu 1 306 -7 2300 79 17 3 chr2 202728105 202728396 -47959458 - AluSq SINE Alu -17 296 2 2392 57 0 74 chr2 202728599 202728935 -47958919 + AluY SINE Alu 1 311 0 254 298 40 16 chr2 202728946 202729070 -47958784 - L1ME4a LINE L1 -38 6083 5957 1745 142 40 4 chr2 202729692 202729999 -47957855 + AluSx SINE Alu 1 317 0 21 0 0 0 chr2 202730109 202730130 -47957724 + AT_rich Low_complexity Low_complexity 1 21 0 697 191 0 0 chr2 202731385 202731511 -47956343 - FRAM SINE Alu -13 163 38 1177 160 5 44 chr2 202731576 202731782 -47956072 + AluJb SINE Alu 3 200 -112 289 245 0 96 chr2 202731799 202731893 -47955961 - Charlie8 DNA MER1_type -2325 92 8 22 0 0 0 chr2 202732381 202732403 -47955451 + AT_rich Low_complexity Low_complexity 1 22 0 224 358 33 8 chr2 202732854 202732974 -47954880 - L2 LINE L2 -476 2838 2716 610 316 60 0 chr2 202733127 202733361 -47954493 - MIR SINE MIR 0 262 15 2073 120 0 3 chr2 202733991 202734301 -47953553 - AluSx SINE Alu 0 309 1 22 0 0 0 chr2 202734423 202734445 -47953409 + AT_rich Low_complexity Low_complexity 1 22 0 2175 113 3 3 chr2 202735157 202735449 -47952405 - AluSx SINE Alu -20 292 1 227 204 0 0 chr2 202735755 202735804 -47952050 + T-rich Low_complexity Low_complexity 2 50 0 2204 119 0 6 chr2 202736181 202736492 -47951362 + AluSx SINE Alu 1 309 -3 214 239 14 28 chr2 202736746 202736817 -47951037 + CT-rich Low_complexity Low_complexity 3 72 0 307 65 9 0 chr2 202736869 202736915 -47950939 - MLT2B3 LTR ERVL 0 554 417 276 149 0 0 chr2 202736915 202736962 -47950892 + (TATG)n Simple_repeat Simple_repeat 3 49 0 208 121 86 0 chr2 202736981 202737039 -47950815 + (TA)n Simple_repeat Simple_repeat 2 64 0 2670 40 0 0 chr2 202737688 202738014 -47949840 + AluY SINE Alu 1 326 0 235 165 44 60 chr2 202739648 202740130 -47947724 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 385 171 51 28 chr2 202739714 202739725 -47948129 + (TA)n Simple_repeat Simple_repeat 1 10 -170 2105 115 4 0 chr2 202739725 202740027 -47947827 - AluSg SINE Alu 0 303 1 385 171 51 28 chr2 202740027 202740190 -47947664 + (TA)n Simple_repeat Simple_repeat 10 180 0 1305 176 127 21 chr2 202740201 202740485 -47947369 - MLT2B3 LTR ERVL -20 534 221 282 255 255 0 chr2 202740594 202740743 -47947111 + MIR SINE MIR 53 239 -23 452 261 156 14 chr2 202741195 202741406 -47946448 + L3b LINE CR1 1105 1345 -238 2272 98 20 0 chr2 202742109 202742406 -47945448 - AluSg SINE Alu -7 303 1 1785 117 3 91 chr2 202742407 202742715 -47945139 - AluSx SINE Alu -31 281 1 653 201 75 35 chr2 202742968 202743167 -47944687 + L1ME3 LINE L1 5955 6161 -1 2681 52 0 0 chr2 202743534 202743841 -47944013 + AluY SINE Alu 1 307 -4 316 301 151 41 chr2 202744505 202744724 -47943130 - L3 LINE CR1 -49 1528 1286 311 313 16 53 chr2 202744730 202744931 -47942923 + MIR SINE MIR 20 212 -50 489 314 72 69 chr2 202745013 202745297 -47942557 - L3 LINE CR1 -381 1196 909 685 142 19 0 chr2 202745297 202745403 -47942451 - L1MC1 LINE L1 0 6333 6226 489 314 72 69 chr2 202745403 202745523 -47942331 - L3 LINE CR1 -668 909 791 1581 203 0 19 chr2 202746034 202746345 -47941509 + AluJo SINE Alu 2 306 -6 260 243 39 39 chr2 202746464 202746567 -47941287 - MLT1K LTR MaLR -3 585 483 26 0 0 0 chr2 202746795 202746821 -47941033 + AT_rich Low_complexity Low_complexity 1 26 0 2255 84 13 10 chr2 202747074 202747384 -47940470 + AluY SINE Alu 1 311 0 476 291 77 61 chr2 202747411 202747724 -47940130 - MLT1K LTR MaLR -143 445 128 2039 150 3 0 chr2 202748052 202748378 -47939476 + AluSx SINE Alu 1 312 0 2568 151 22 93 chr2 202749076 202749308 -47938546 + L1MB7 LINE L1 5673 5920 -264 1963 147 0 27 chr2 202749308 202749601 -47938253 - AluSx SINE Alu -25 287 3 2568 151 22 93 chr2 202749601 202749919 -47937935 + L1MB7 LINE L1 5920 6184 0 1818 163 0 13 chr2 202750322 202750622 -47937232 - AluJb SINE Alu -3 309 14 248 247 144 21 chr2 202750777 202750874 -47936980 - L2 LINE L2 -5 3308 3200 2187 113 7 0 chr2 202750993 202751293 -47936561 + AluSx SINE Alu 1 302 -10 1892 138 14 0 chr2 202751572 202751862 -47935992 + AluSq SINE Alu 5 298 -15 2145 106 0 3 chr2 202751864 202752157 -47935697 + AluY SINE Alu 1 292 -19 847 158 70 13 chr2 202752233 202752391 -47935463 - AluSg/x SINE Alu -20 292 126 1881 120 35 14 chr2 202752398 202752682 -47935172 - AluSx SINE Alu -22 290 1 2119 98 30 14 chr2 202752891 202753187 -47934667 - AluY SINE Alu -10 301 1 444 77 0 0 chr2 202753304 202753369 -47934485 + (TG)n Simple_repeat Simple_repeat 2 66 0 385 316 90 40 chr2 202753442 202753619 -47934235 - MIR3 SINE MIR -21 187 2 414 265 38 38 chr2 202753626 202753758 -47934096 + MIR SINE MIR 110 241 -21 21 0 0 0 chr2 202755198 202755219 -47932635 + AT_rich Low_complexity Low_complexity 1 21 0 772 242 85 18 chr2 202755348 202755571 -47932283 - MIR SINE MIR -10 252 15 1972 138 28 0 chr2 202755714 202756005 -47931849 + AluSx SINE Alu 1 299 -13 758 164 0 0 chr2 202756068 202756184 -47931670 + FRAM SINE Alu 54 169 -7 249 299 11 46 chr2 202756185 202756272 -47931582 + L2 LINE L2 3230 3313 0 656 235 145 23 chr2 202757020 202757241 -47930613 - MIR SINE MIR 0 262 15 2376 90 0 10 chr2 202758329 202758640 -47929214 + AluSc SINE Alu 1 308 -1 2145 129 3 0 chr2 202759752 202760055 -47927799 - AluSq SINE Alu -9 304 1 3523 129 72 4 chr2 202760241 202760798 -47927056 + LTR49 LTR ERV1 1 595 0 214 286 13 65 chr2 202761971 202762048 -47925806 + L2 LINE L2 3200 3272 0 23 54 0 0 chr2 202762287 202762324 -47925530 + AT_rich Low_complexity Low_complexity 1 37 0 604 204 15 38 chr2 202762693 202762825 -47925029 + FLAM_A SINE Alu 11 139 -3 3115 72 14 36 chr2 202762990 202763408 -47924446 + L1PA8A LINE L1 5723 6131 0 414 0 0 0 chr2 202763713 202763759 -47924095 + (TG)n Simple_repeat Simple_repeat 2 47 0 1908 116 18 4 chr2 202763759 202764036 -47923818 - AluSg SINE Alu -28 282 2 250 328 176 14 chr2 202764186 202764692 -47923162 + L2 LINE L2 1846 2433 -881 190 333 61 30 chr2 202764861 202764960 -47922894 + L2 LINE L2 3179 3280 -33 2270 116 0 0 chr2 202765865 202766189 -47921665 - AluSx SINE Alu 0 312 1 180 0 0 0 chr2 202766276 202766296 -47921558 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1970 126 7 7 chr2 202767006 202767334 -47920520 - AluSx SINE Alu 0 312 1 2049 123 6 25 chr2 202767370 202767688 -47920166 + AluSx SINE Alu 1 312 0 2298 105 3 6 chr2 202767991 202768305 -47919549 + AluSq SINE Alu 1 313 0 395 258 86 94 chr2 202768634 202768764 -47919090 + MARNA DNA Mariner 94 223 -363 1588 152 83 7 chr2 202768764 202769053 -47918801 - AluSx SINE Alu -1 311 1 395 258 86 94 chr2 202769053 202769155 -47918699 + MARNA DNA Mariner 223 324 -262 2108 88 0 69 chr2 202769180 202769498 -47918356 - AluY SINE Alu -14 297 2 29 28 0 0 chr2 202769628 202769664 -47918190 + AT_rich Low_complexity Low_complexity 1 36 0 279 219 0 29 chr2 202769951 202770056 -47917798 + GA-rich Low_complexity Low_complexity 1 102 0 315 260 39 0 chr2 202770279 202770356 -47917498 + L2 LINE L2 3223 3302 -11 1826 106 0 4 chr2 202770661 202770907 -47916947 + AluSx SINE Alu 14 258 -54 181 280 260 20 chr2 202771545 202771645 -47916209 + MIR SINE MIR 53 176 -86 564 249 137 10 chr2 202771744 202771941 -47915913 + MIR SINE MIR 35 256 -6 2445 52 10 10 chr2 202773392 202773700 -47914154 + AluY SINE Alu 1 308 -3 382 346 15 7 chr2 202774708 202774844 -47913010 - MIR SINE MIR -56 152 16 1707 109 19 4 chr2 202775363 202775619 -47912235 + L1MA5A LINE L1 6034 6293 -4 1924 146 4 0 chr2 202776467 202776771 -47911083 - AluSx SINE Alu 0 305 1 298 82 0 61 chr2 202776945 202776994 -47910860 + MSTC LTR MaLR 1 46 -382 1017 225 59 36 chr2 202777120 202777373 -47910481 - MIR SINE MIR -2 260 2 405 0 0 0 chr2 202777432 202777477 -47910377 + (CA)n Simple_repeat Simple_repeat 2 46 0 477 315 49 80 chr2 202777477 202777763 -47910091 + L2 LINE L2 2965 3241 -31 1876 149 0 44 chr2 202778514 202778829 -47909025 + AluJo SINE Alu 1 301 -11 2178 106 7 0 chr2 202778856 202779149 -47908705 + AluSg SINE Alu 1 295 -15 601 270 139 56 chr2 202779204 202779578 -47908276 - MLT1J2 LTR MaLR 0 446 42 243 103 0 0 chr2 202779775 202779814 -47908040 + (TG)n Simple_repeat Simple_repeat 1 39 0 1252 149 25 21 chr2 202779886 202780121 -47907733 + Charlie4 DNA MER1_type 39 274 -1687 2045 131 0 7 chr2 202780122 202780419 -47907435 + AluSg SINE Alu 1 295 -15 604 247 113 102 chr2 202780474 202780915 -47906939 - MLT1J2 LTR MaLR 0 446 1 2323 75 0 0 chr2 202781045 202781338 -47906516 - AluSg SINE Alu -17 293 1 1885 170 0 0 chr2 202781983 202782305 -47905549 + AluJb SINE Alu 1 312 0 21 0 0 0 chr2 202782439 202782460 -47905394 + AT_rich Low_complexity Low_complexity 1 21 0 1869 125 0 4 chr2 202782564 202782828 -47905026 - AluSx SINE Alu -9 303 41 1785 145 29 4 chr2 202783685 202783961 -47903893 + AluJo SINE Alu 21 303 -9 2325 101 0 3 chr2 202784101 202784408 -47903446 - AluSc SINE Alu -3 306 1 2128 120 10 3 chr2 202784553 202784844 -47903010 - AluSx SINE Alu -19 293 1 872 137 8 0 chr2 202785236 202785360 -47902494 + AluJ SINE Alu 2 126 -186 2968 43 23 3 chr2 202785369 202785716 -47902138 - L1PA7 LINE L1 -2 6152 5799 2192 117 0 16 chr2 202785765 202785902 -47901952 + AluSq SINE Alu 1 139 -174 2316 101 3 13 chr2 202785902 202786218 -47901636 + AluSq SINE Alu 1 313 0 2192 117 0 16 chr2 202786218 202786396 -47901458 + AluSq SINE Alu 139 311 -2 917 196 25 0 chr2 202786401 202786564 -47901290 + AluJ SINE Alu 134 300 -12 2376 99 0 0 chr2 202786659 202786962 -47900892 + AluSg SINE Alu 1 303 -7 338 253 98 109 chr2 202787119 202787522 -47900332 - MLT1J LTR MaLR -4 507 196 1148 143 0 11 chr2 202788460 202788642 -47899212 - AluSg1 SINE Alu -10 300 121 189 0 0 0 chr2 202788878 202788899 -47898955 + (TA)n Simple_repeat Simple_repeat 1 21 0 291 54 0 0 chr2 202788899 202788936 -47898918 + (CA)n Simple_repeat Simple_repeat 2 38 0 32 75 0 0 chr2 202789979 202790046 -47897808 + AT_rich Low_complexity Low_complexity 1 67 0 2584 46 7 0 chr2 202790141 202790445 -47897409 - AluY SINE Alu -5 306 1 1033 98 0 0 chr2 202790447 202790579 -47897275 - AluSg1 SINE Alu -177 132 1 357 312 121 53 chr2 202790586 202790662 -47897192 - L3b LINE CR1 -63 1520 1451 1961 135 47 0 chr2 202790662 202790959 -47896895 + AluSx SINE Alu 1 311 -1 357 312 121 53 chr2 202790959 202791238 -47896616 - L3b LINE CR1 -132 1451 1141 2436 98 0 0 chr2 202791526 202791833 -47896021 + AluSg SINE Alu 1 307 -3 272 224 120 104 chr2 202792191 202792383 -47895471 - MLT1K LTR MaLR -4 584 390 307 136 0 30 chr2 202792487 202792553 -47895301 + (GGA)n Simple_repeat Simple_repeat 2 65 0 242 269 0 0 chr2 202792557 202792635 -47895219 + GA-rich Low_complexity Low_complexity 3 80 0 2404 201 18 28 chr2 202793062 202793260 -47894594 + MLT1D LTR MaLR 13 211 -294 2313 81 7 0 chr2 202793260 202793544 -47894310 + AluSg SINE Alu 11 296 -14 2404 201 18 28 chr2 202793544 202793843 -47894011 + MLT1D LTR MaLR 211 505 0 221 408 38 0 chr2 202794032 202794189 -47893665 - L2 LINE L2 -652 2662 2500 2396 78 3 19 chr2 202794608 202794917 -47892937 + AluSp SINE Alu 1 304 -9 253 256 86 94 chr2 202795236 202795260 -47892594 - L2 LINE L2 -8 3264 3241 2211 144 10 38 chr2 202795260 202795657 -47892197 + MLT1B LTR MaLR 1 386 -4 253 256 86 94 chr2 202795657 202795749 -47892105 - L2 LINE L2 -31 3241 3149 211 349 0 0 chr2 202795880 202795946 -47891908 + L2 LINE L2 3205 3270 -2 2109 42 0 63 chr2 202795976 202796261 -47891593 - AluY SINE Alu -44 267 1 2275 79 17 3 chr2 202796464 202796755 -47891099 + AluSq SINE Alu 2 296 -17 507 355 84 32 chr2 202796801 202797145 -47890709 - L2 LINE L2 -13 3259 2898 2027 129 3 10 chr2 202797620 202797922 -47889932 - AluSx SINE Alu -12 300 1 2411 74 0 3 chr2 202798400 202798709 -47889145 + AluY SINE Alu 1 308 -3 21 36 0 0 chr2 202798720 202798748 -47889106 + AT_rich Low_complexity Low_complexity 1 28 0 2357 120 0 0 chr2 202799032 202799341 -47888513 - AluSx SINE Alu -3 309 1 2165 125 3 3 chr2 202799345 202799650 -47888204 - AluSc SINE Alu -4 305 1 423 246 9 21 chr2 202799740 202799863 -47887991 - L1P4 LINE L1 -525 5596 5490 2230 102 0 3 chr2 202799998 202800281 -47887573 + AluSc SINE Alu 3 284 -25 2366 86 0 0 chr2 202800289 202800593 -47887261 + AluY SINE Alu 6 309 -2 2124 142 0 0 chr2 202800671 202800973 -47886881 + AluSx SINE Alu 1 302 -10 2364 52 0 11 chr2 202801404 202801715 -47886139 + AluY SINE Alu 1 308 0 413 258 33 25 chr2 202802082 202802202 -47885652 + MIR SINE MIR 20 140 -68 316 258 33 17 chr2 202802284 202802404 -47885450 - MER103 DNA DNA -1 165 44 315 326 114 62 chr2 202802567 202803053 -47884801 + L2 LINE L2 2371 2901 -371 2327 103 42 25 chr2 202803053 202803411 -47884443 + THE1B LTR MaLR 1 364 0 315 326 114 62 chr2 202803411 202803573 -47884281 + L2 LINE L2 2901 3053 -219 191 350 158 33 chr2 202803612 202803732 -47884122 + L2 LINE L2 3138 3272 0 2251 111 3 0 chr2 202803880 202804178 -47883676 - AluSq SINE Alu -14 299 1 3025 61 3 0 chr2 202804602 202804994 -47882860 - L1PA5 LINE L1 -1 6153 5761 378 0 0 0 chr2 202806465 202806507 -47881347 + (CAGT)n Simple_repeat Simple_repeat 1 42 0 379 295 106 92 chr2 202806517 202807063 -47880791 - L1M2 LINE L1 -6047 802 249 205 152 0 0 chr2 202807240 202807273 -47880581 + G-rich Low_complexity Low_complexity 1 33 0 203 188 203 16 chr2 202807695 202807759 -47880095 - L2 LINE L2 -8 3264 3189 431 292 56 28 chr2 202807803 202807981 -47879873 + MIR SINE MIR 64 246 -16 192 405 55 6 chr2 202808062 202808225 -47879629 - L2 LINE L2 -143 3129 2959 308 247 55 14 chr2 202808914 202808987 -47878867 + MIR3 SINE MIR 85 160 -48 731 276 126 5 chr2 202809091 202809305 -47878549 - MIR SINE MIR -21 241 2 3065 151 85 77 chr2 202809343 202809500 -47878354 - L1MB4 LINE L1 -8 6172 6018 265 141 188 0 chr2 202809500 202809564 -47878290 + AluJ/FRAM SINE Alu 217 292 -10 3065 151 85 77 chr2 202809564 202810352 -47877502 - L1MB4 LINE L1 -162 6018 5155 1130 89 0 0 chr2 202810352 202810509 -47877345 - L1PA6 LINE L1 -5 6149 5993 3065 151 85 77 chr2 202810509 202810800 -47877054 - L1MB4 LINE L1 -1025 5155 4868 220 244 0 0 chr2 202810812 202810857 -47876997 + (TA)n Simple_repeat Simple_repeat 1 45 0 2334 111 0 0 chr2 202810858 202811155 -47876699 - AluSx SINE Alu -15 297 1 2315 102 0 3 chr2 202812102 202812406 -47875448 + AluSp SINE Alu 1 303 -10 1456 144 156 8 chr2 202812491 202812754 -47875100 + AluJb SINE Alu 1 302 0 243 0 0 0 chr2 202812758 202812785 -47875069 + (TA)n Simple_repeat Simple_repeat 1 27 0 969 236 68 21 chr2 202813076 202813772 -47874082 - Charlie7 DNA MER1_type -284 2328 1518 563 199 75 50 chr2 202813894 202813938 -47873916 - Charlie7 DNA MER1_type -1311 1301 1260 2412 85 0 3 chr2 202813938 202814244 -47873610 - AluSp SINE Alu -7 306 2 563 199 75 50 chr2 202814244 202814360 -47873494 - Charlie7 DNA MER1_type -1352 1260 1137 276 225 9 72 chr2 202814542 202814653 -47873201 - Charlie7 DNA MER1_type -2507 105 2 2334 84 3 26 chr2 202814678 202814989 -47872865 + AluSp SINE Alu 1 304 -9 613 272 49 16 chr2 202814989 202815235 -47872619 + L1ME4a LINE L1 5660 5913 -208 1531 162 19 4 chr2 202815365 202815636 -47872218 + AluSx SINE Alu 37 311 -1 2412 66 0 7 chr2 202815781 202816084 -47871770 + AluY SINE Alu 1 301 -10 1020 138 98 40 chr2 202817499 202817644 -47870210 + MER33 DNA MER1_type 2 137 -2448 2018 121 19 51 chr2 202817644 202817957 -47869897 + AluSx SINE Alu 1 303 -9 1020 138 98 40 chr2 202817957 202818087 -47869767 + MER33 DNA MER1_type 137 293 -31 700 195 63 18 chr2 202818091 202818312 -47869542 - MER20B DNA MER1_type -50 733 503 1443 210 45 58 chr2 202818463 202818603 -47869251 - L1MCa LINE L1 -1127 5299 5159 2438 71 0 0 chr2 202818603 202818899 -47868955 - AluY SINE Alu -15 296 1 1443 210 45 58 chr2 202818899 202819085 -47868769 - L1MCa LINE L1 -1267 5159 4972 2337 105 20 0 chr2 202819085 202819391 -47868463 - AluSx SINE Alu 0 312 1 1443 210 45 58 chr2 202819391 202819600 -47868254 - L1MCa LINE L1 -1454 4972 4770 28 29 0 0 chr2 202820348 202820383 -47867471 + AT_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr2 202820607 202820640 -47867214 + AT_rich Low_complexity Low_complexity 1 33 0 2346 104 0 0 chr2 202820657 202820955 -47866899 + AluSx SINE Alu 1 298 -14 269 243 199 48 chr2 202821095 202821301 -47866553 - L1ME LINE L1 -488 5956 5720 2234 113 3 0 chr2 202821364 202821664 -47866190 - AluSq SINE Alu -11 302 2 1661 192 0 14 chr2 202821668 202821965 -47865889 - AluJb SINE Alu -19 293 1 5738 211 76 30 chr2 202822337 202823148 -47864706 - L1MCa LINE L1 -1980 4446 3674 1727 181 13 17 chr2 202823148 202823446 -47864408 - AluJo SINE Alu -15 297 1 5738 211 76 30 chr2 202823446 202823463 -47864391 - L1MCa LINE L1 -2752 3674 3659 2109 143 0 6 chr2 202823463 202823777 -47864077 - AluSx SINE Alu 0 312 1 5738 211 76 30 chr2 202823777 202824945 -47862909 - L1MCa LINE L1 -2767 3659 2546 2462 73 0 10 chr2 202824945 202825259 -47862595 - AluY SINE Alu 0 311 1 1907 134 63 0 chr2 202825259 202825543 -47862311 - AluSx SINE Alu -10 302 1 5738 211 76 30 chr2 202825543 202826362 -47861492 - L1MCa LINE L1 -3879 2547 1499 198 324 0 29 chr2 202826366 202826434 -47861420 - MIR SINE MIR -180 82 17 24 0 0 0 chr2 202826828 202826852 -47861002 + AT_rich Low_complexity Low_complexity 1 24 0 2449 74 0 0 chr2 202827157 202827453 -47860401 + AluY SINE Alu 1 296 -15 207 0 0 0 chr2 202827632 202827655 -47860199 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2275 107 10 0 chr2 202827869 202828169 -47859685 + AluSx SINE Alu 1 303 -9 2231 95 3 3 chr2 202828429 202828725 -47859129 + AluSc SINE Alu 3 298 -11 1725 214 159 30 chr2 202828725 202829587 -47858267 + L1ME2 LINE L1 5196 6312 0 1264 193 62 77 chr2 202829722 202829889 -47857965 + L1ME2 LINE L1 5618 5786 -378 2195 98 17 7 chr2 202829889 202830185 -47857669 - AluSx SINE Alu -13 299 1 1264 193 62 77 chr2 202830185 202830274 -47857580 + L1ME2 LINE L1 5786 5875 -289 1474 129 0 36 chr2 202830274 202830498 -47857356 + AluSg/x SINE Alu 86 301 -11 1264 193 62 77 chr2 202830498 202830695 -47857159 + L1ME2 LINE L1 5875 6065 -99 23 33 0 0 chr2 202830761 202830791 -47857063 + AT_rich Low_complexity Low_complexity 1 30 0 285 176 14 0 chr2 202830954 202831028 -47856826 - L1MA7 LINE L1 -12 6279 6205 2057 98 66 0 chr2 202831145 202831431 -47856423 + AluSq SINE Alu 1 305 -8 2356 92 3 0 chr2 202831481 202831785 -47856069 - AluY SINE Alu -6 305 1 2004 150 0 0 chr2 202831788 202832082 -47855772 - AluSx SINE Alu -18 294 1 1174 261 58 29 chr2 202832238 202832720 -47855134 - MER20B DNA MER1_type -287 496 1 336 335 137 33 chr2 202832732 202833039 -47854815 + L2 LINE L2 2933 3271 -1 22 56 0 0 chr2 202833222 202833258 -47854596 + AT_rich Low_complexity Low_complexity 1 36 0 1035 149 7 0 chr2 202833615 202833769 -47854085 - FRAM SINE Alu -20 156 2 22 35 0 0 chr2 202834192 202834221 -47853633 + AT_rich Low_complexity Low_complexity 1 29 0 2246 114 3 0 chr2 202834479 202834786 -47853068 + AluSx SINE Alu 1 308 -4 1886 131 8 4 chr2 202835285 202835552 -47852302 - AluSq SINE Alu -16 297 30 604 291 147 45 chr2 202838192 202838697 -47849157 - L2 LINE L2 -8 3305 2740 573 174 41 0 chr2 202838710 202838808 -47849046 - L2 LINE L2 0 3313 3212 1908 129 0 31 chr2 202838849 202839143 -47848711 + AluJb SINE Alu 10 294 -18 466 275 46 8 chr2 202839159 202839290 -47848564 + MER8 DNA MER2_type 1 136 -103 22 0 0 0 chr2 202839290 202839312 -47848542 + AT_rich Low_complexity Low_complexity 1 22 0 1239 97 0 46 chr2 202839415 202839590 -47848264 - AluSx SINE Alu -145 167 1 234 204 19 0 chr2 202839591 202839645 -47848209 + MER8 DNA MER2_type 123 177 -62 1747 159 32 3 chr2 202841010 202841293 -47846561 - AluSg SINE Alu -19 291 1 4410 158 33 12 chr2 202841293 202842209 -47845645 - L1MC1 LINE L1 -218 6115 5186 2249 98 3 10 chr2 202842328 202842624 -47845230 + AluSx SINE Alu 1 294 -18 2054 137 3 7 chr2 202843673 202843980 -47843874 - AluSx SINE Alu -6 306 1 183 42 0 0 chr2 202845754 202845778 -47842076 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2080 96 4 11 chr2 202845783 202846064 -47841790 - AluSc SINE Alu -30 279 1 348 185 82 116 chr2 202846420 202846566 -47841288 + L1M4 LINE L1 2844 2984 -3162 442 316 38 0 chr2 202846620 202846753 -47841101 + MIR3 SINE MIR 33 170 -38 201 74 0 0 chr2 202847130 202847157 -47840697 + (CTG)n Simple_repeat Simple_repeat 1 27 0 1160 66 0 0 chr2 202847730 202847866 -47839988 + AluY SINE Alu 1 136 -175 2203 82 7 0 chr2 202847866 202848145 -47839709 + AluY SINE Alu 30 310 -1 1108 199 78 39 chr2 202848148 202848479 -47839375 - MER2 DNA MER2_type 0 344 1 2174 100 30 0 chr2 202848508 202848809 -47839045 - AluSg SINE Alu 0 310 1 1960 122 11 4 chr2 202849415 202849723 -47838131 + AluSg1 SINE Alu 1 310 0 26 0 0 0 chr2 202850042 202850068 -47837786 + AT_rich Low_complexity Low_complexity 1 26 0 2031 131 20 3 chr2 202850862 202851167 -47836687 - AluSx SINE Alu -2 310 1 372 239 73 18 chr2 202851850 202851959 -47835895 - MIR SINE MIR -22 240 126 1999 160 3 3 chr2 202853323 202853635 -47834219 - AluJb SINE Alu 0 312 1 824 191 114 27 chr2 202853747 202853934 -47833920 + Charlie1 DNA MER1_type 1 212 -2549 1537 159 101 0 chr2 202853934 202854219 -47833635 - AluSx SINE Alu 0 311 1 824 191 114 27 chr2 202854219 202854250 -47833604 + Charlie1 DNA MER1_type 212 239 -2522 388 180 56 0 chr2 202854282 202854371 -47833483 - MER34 LTR ERV1 -4 538 445 980 180 53 18 chr2 202854440 202854668 -47833186 - MER34 LTR ERV1 -280 262 27 816 267 67 40 chr2 202854750 202855124 -47832730 - MLT1L LTR MaLR -119 496 113 733 284 32 40 chr2 202855441 202855691 -47832163 + MIR SINE MIR 3 250 -12 293 217 130 33 chr2 202856255 202856347 -47831507 + L2 LINE L2 3213 3313 0 2298 120 0 0 chr2 202856847 202857155 -47830699 - AluSg SINE Alu -2 308 1 24 0 0 0 chr2 202859174 202859198 -47828656 + AT_rich Low_complexity Low_complexity 1 24 0 2556 144 142 134 chr2 202859512 202859846 -47828008 + L1MC3 LINE L1 6593 6923 -862 1473 176 34 61 chr2 202859846 202860142 -47827712 + AluJo SINE Alu 1 288 -24 2556 144 142 134 chr2 202860142 202860367 -47827487 + L1MC3 LINE L1 6923 7145 -640 244 299 39 0 chr2 202860367 202860444 -47827410 + MLT1F1 LTR MaLR 35 114 -453 2556 144 142 134 chr2 202860444 202860905 -47826949 + L1MC3 LINE L1 7145 7691 -94 502 136 74 0 chr2 202861157 202861238 -47826616 - FRAM SINE Alu -49 127 41 2152 123 7 3 chr2 202862417 202862745 -47825109 - AluSc SINE Alu 0 329 1 334 133 20 51 chr2 202862775 202862873 -47824981 + CT-rich Low_complexity Low_complexity 2 96 0 213 39 0 0 chr2 202862885 202862911 -47824943 + (TCTCCC)n Simple_repeat Simple_repeat 1 26 0 1383 119 29 112 chr2 202862911 202863188 -47824666 - AluJo SINE Alu -48 264 11 34 42 0 0 chr2 202863585 202863633 -47824221 + AT_rich Low_complexity Low_complexity 1 48 0 180 214 0 0 chr2 202865686 202865742 -47822112 + C-rich Low_complexity Low_complexity 2 57 0 213 204 0 0 chr2 202865919 202865963 -47821891 + C-rich Low_complexity Low_complexity 5 48 0 339 327 120 69 chr2 202866070 202866520 -47821334 + L1M2 LINE L1 446 918 -5931 209 250 0 15 chr2 202866572 202866640 -47821214 + C-rich Low_complexity Low_complexity 3 69 0 275 244 0 11 chr2 202867666 202867756 -47820098 + (TATATG)n Simple_repeat Simple_repeat 2 90 0 899 125 0 22 chr2 202871596 202871732 -47816122 - FLAM_C SINE Alu 0 133 1 255 93 0 0 chr2 202872900 202872943 -47814911 + (TA)n Simple_repeat Simple_repeat 2 44 0 2445 75 0 10 chr2 202873402 202873709 -47814145 + AluY SINE Alu 1 304 -7 25 31 0 0 chr2 202875263 202875295 -47812559 + AT_rich Low_complexity Low_complexity 1 32 0 2361 88 7 0 chr2 202877211 202877505 -47810349 - AluSc SINE Alu -13 296 1 22 0 0 0 chr2 202880177 202880199 -47807655 + AT_rich Low_complexity Low_complexity 1 22 0 2301 90 10 3 chr2 202880944 202881243 -47806611 - AluSq SINE Alu -12 301 1 1910 122 76 3 chr2 202881480 202881768 -47806086 + AluSx SINE Alu 1 309 -3 983 148 72 86 chr2 202881889 202882098 -47805756 + AluJb SINE Alu 85 290 -22 1800 153 3 18 chr2 202882283 202882565 -47805289 + AluJb SINE Alu 1 278 -34 2152 91 11 0 chr2 202883261 202883548 -47804306 + AluSg SINE Alu 1 290 -20 210 300 100 25 chr2 202883616 202883696 -47804158 + L2 LINE L2 3146 3231 -41 272 295 118 34 chr2 202884369 202884606 -47803248 + L2 LINE L2 2359 2615 -699 1602 126 37 58 chr2 202884677 202884971 -47802883 - AluJo SINE Alu -13 299 12 2197 103 3 7 chr2 202884997 202885297 -47802557 - AluSc SINE Alu -10 299 1 254 250 272 27 chr2 202885299 202885483 -47802371 + Charlie2 DNA MER1_type 93 321 -2461 697 204 133 4 chr2 202885495 202885720 -47802134 + Charlie2 DNA MER1_type 1866 2119 -743 294 302 103 33 chr2 202885972 202886214 -47801640 + L2 LINE L2 2824 3082 -190 2475 71 0 0 chr2 202886289 202886584 -47801270 + AluY SINE Alu 1 295 -16 381 351 40 14 chr2 202886815 202886963 -47800891 + MIR SINE MIR 4 155 -107 1731 108 15 11 chr2 202886983 202887251 -47800603 - AluSp SINE Alu -22 291 23 2182 72 0 31 chr2 202887465 202887755 -47800099 + AluY SINE Alu 1 281 -30 2105 68 43 7 chr2 202887755 202888035 -47799819 + AluY SINE Alu 12 301 -10 736 271 115 34 chr2 202888038 202888329 -47799525 - L1MEc LINE L1 -4759 1637 1371 1792 246 74 32 chr2 202888329 202888898 -47798956 + MLT1E LTR MaLR 1 593 0 736 271 115 34 chr2 202888898 202889258 -47798596 - L1MEc LINE L1 -5025 1371 933 345 208 92 42 chr2 202889292 202889412 -47798442 - L1MEc LINE L1 -6242 154 29 307 185 0 0 chr2 202889414 202889468 -47798386 - MER5B DNA MER1_type -124 54 1 1981 134 16 0 chr2 202890546 202890852 -47797002 + AluSx SINE Alu 1 311 -1 2541 59 3 0 chr2 202891498 202891803 -47796051 - AluY SINE Alu -3 308 3 240 277 199 12 chr2 202892197 202892363 -47795491 - MIR SINE MIR -2 260 64 199 333 125 0 chr2 202892450 202892522 -47795332 - L2 LINE L2 -4 3268 3188 2039 130 7 0 chr2 202892739 202893039 -47794815 + AluSx SINE Alu 1 302 -10 304 271 47 39 chr2 202893245 202893374 -47794480 + MARNA DNA Mariner 289 418 -168 535 212 0 20 chr2 202894810 202894909 -47792945 - L2 LINE L2 -27 3286 3190 26 64 0 0 chr2 202896146 202896193 -47791661 + AT_rich Low_complexity Low_complexity 1 47 0 184 226 16 65 chr2 202896393 202896455 -47791399 - L2 LINE L2 0 3272 3214 205 316 18 0 chr2 202896607 202896664 -47791190 + L2 LINE L2 3200 3257 -15 345 348 125 22 chr2 202896848 202897161 -47790693 - L2 LINE L2 -78 3194 2850 400 356 55 14 chr2 202897229 202897448 -47790406 + MIR SINE MIR 9 236 -26 214 405 0 0 chr2 202897522 202897606 -47790248 - L2 LINE L2 -823 2491 2408 2801 13 0 0 chr2 202898003 202898311 -47789543 + AluYb8 SINE Alu 1 308 -10 2383 88 0 0 chr2 202898678 202898975 -47788879 + AluSq SINE Alu 1 297 -16 384 127 0 0 chr2 202899916 202899971 -47787883 + AluSx SINE Alu 1 55 -246 1487 138 5 0 chr2 202900235 202900452 -47787402 + AluSx SINE Alu 58 275 -37 969 189 0 0 chr2 202901579 202901738 -47786116 - AluJb SINE Alu -18 294 136 2167 114 0 0 chr2 202902282 202902583 -47785271 + AluSx SINE Alu 1 301 0 254 114 0 0 chr2 202902583 202902618 -47785236 + AluSq SINE Alu 133 167 -136 2232 117 0 13 chr2 202903088 202903404 -47784450 + AluSx SINE Alu 1 312 0 217 291 14 43 chr2 202903404 202903554 -47784300 + MIR SINE MIR 20 200 -62 182 339 253 16 chr2 202903577 202903763 -47784091 + L3 LINE CR1 1271 1500 -77 21 0 0 0 chr2 202903837 202903858 -47783996 + AT_rich Low_complexity Low_complexity 1 21 0 2238 119 0 0 chr2 202904806 202905100 -47782754 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr2 202905287 202905308 -47782546 + AT_rich Low_complexity Low_complexity 1 21 0 486 280 16 28 chr2 202905757 202905939 -47781915 + GA-rich Low_complexity Low_complexity 1 180 0 426 236 94 0 chr2 202905949 202906076 -47781778 - LTR33 LTR ERVL -382 139 1 2076 149 7 3 chr2 202906752 202907061 -47780793 + AluSx SINE Alu 1 310 -2 3514 192 45 62 chr2 202907127 202907326 -47780528 + L1ME1 LINE L1 4999 5200 -966 2162 90 7 0 chr2 202907326 202907605 -47780249 + AluSq SINE Alu 1 281 -32 3514 192 45 62 chr2 202907605 202908597 -47779257 + L1ME1 LINE L1 5200 6166 0 2631 99 67 7 chr2 202909112 202909516 -47778338 + MSTA LTR MaLR 1 428 0 219 310 0 26 chr2 202910266 202910379 -47777475 + GA-rich Low_complexity Low_complexity 1 110 0 25 23 0 23 chr2 202911643 202911654 -47776200 + AT_rich Low_complexity Low_complexity 1 11 -31 333 0 0 0 chr2 202911654 202911691 -47776163 + (TG)n Simple_repeat Simple_repeat 2 38 0 25 23 0 23 chr2 202911691 202911722 -47776132 + AT_rich Low_complexity Low_complexity 11 42 0 1759 116 48 65 chr2 202913785 202914079 -47773775 + AluSx SINE Alu 1 289 -23 278 26 26 0 chr2 202914784 202914823 -47773031 + (TTG)n Simple_repeat Simple_repeat 3 42 0 456 19 0 0 chr2 202914823 202914876 -47772978 + (TGG)n Simple_repeat Simple_repeat 1 53 0 219 285 97 21 chr2 202915027 202915144 -47772710 - MIR SINE MIR -111 151 25 2066 137 0 22 chr2 202915295 202915608 -47772246 - AluJb SINE Alu -6 306 1 2166 117 3 3 chr2 202916491 202916790 -47771064 - AluSx SINE Alu -13 299 1 333 0 0 0 chr2 202917270 202917307 -47770547 + (GA)n Simple_repeat Simple_repeat 2 38 0 2361 89 26 0 chr2 202917609 202917912 -47769942 - AluSp SINE Alu -2 311 1 1412 148 14 47 chr2 202918314 202918591 -47769263 + MLT1D LTR MaLR 9 276 -229 1979 97 0 62 chr2 202918592 202918913 -47768941 + AluSx SINE Alu 1 301 -11 530 73 0 37 chr2 202919147 202919229 -47768625 - AluSx SINE Alu -1 308 230 1103 133 0 0 chr2 202919230 202919380 -47768474 - AluSx SINE Alu -154 158 9 2232 107 0 10 chr2 202919405 202919705 -47768149 - AluSc SINE Alu -12 297 1 270 169 102 0 chr2 202919960 202920019 -47767835 + MLT1K LTR MaLR 522 586 -2 620 110 0 11 chr2 202920630 202920721 -47767133 - FLAM SINE Alu -16 127 38 423 163 12 12 chr2 202920722 202920808 -47767046 - L1MB7 LINE L1 -46 6138 6053 247 191 0 0 chr2 202920905 202920952 -47766902 + Charlie8 DNA MER1_type 2368 2414 -3 1170 126 0 0 chr2 202921174 202921333 -47766521 - AluSg/x SINE Alu -5 305 147 2770 112 31 7 chr2 202921447 202921865 -47765989 - MSTA LTR MaLR 0 428 1 1982 139 41 0 chr2 202922174 202922468 -47765386 + AluSx SINE Alu 1 306 -6 201 260 0 0 chr2 202922804 202922854 -47765000 + CT-rich Low_complexity Low_complexity 2 51 0 529 195 90 12 chr2 202922863 202923053 -47764801 - MER8 DNA MER2_type -2 237 1 1302 77 12 6 chr2 202923102 202923270 -47764584 + AluSp SINE Alu 1 169 -144 2234 90 0 34 chr2 202923284 202923605 -47764249 - AluY SINE Alu -1 310 1 2361 185 145 76 chr2 202923606 202924339 -47763515 - L1MC4 LINE L1 -204 7838 7157 2324 94 0 3 chr2 202924339 202924636 -47763218 + AluSq SINE Alu 1 296 -17 1038 92 0 0 chr2 202924636 202924810 -47763044 + (TA)n Simple_repeat Simple_repeat 2 175 0 2361 185 145 76 chr2 202924810 202924988 -47762866 - L1MC4 LINE L1 -884 7158 6863 626 65 0 22 chr2 202924993 202925085 -47762769 - AluY SINE Alu -7 304 215 464 193 60 66 chr2 202925085 202925251 -47762603 - L1MC4a LINE L1 -1021 6787 6623 183 156 0 0 chr2 202925674 202925706 -47762148 + (TG)n Simple_repeat Simple_repeat 2 33 0 499 216 0 10 chr2 202925714 202925816 -47762038 - MLT1C LTR MaLR -2 465 365 2663 82 6 0 chr2 202926005 202926358 -47761496 + THE1A LTR MaLR 1 355 0 11266 88 3 5 chr2 202926358 202927931 -47759923 + THE1A-int LTR MaLR 1 1571 -9 2254 75 102 0 chr2 202927933 202928255 -47759599 + THE1A LTR MaLR 1 355 0 2139 88 14 14 chr2 202928364 202928675 -47759179 - AluSx SINE Alu 0 311 1 2184 58 4 0 chr2 202928699 202928960 -47758894 - AluY SINE Alu -12 299 38 508 115 11 11 chr2 202929564 202929651 -47758203 + AluJb SINE Alu 158 244 -68 180 125 0 0 chr2 202929689 202929721 -47758133 + (T)n Simple_repeat Simple_repeat 1 32 0 806 154 0 8 chr2 202929922 202930052 -47757802 - FLAM_C SINE Alu -4 129 1 206 232 18 18 chr2 202930276 202930332 -47757522 + CT-rich Low_complexity Low_complexity 3 58 0 287 324 68 28 chr2 202930870 202931046 -47756808 - MER5A DNA MER1_type -6 183 1 585 362 112 15 chr2 202931051 202931465 -47756389 + L2 LINE L2 2765 3225 -47 2071 102 42 0 chr2 202931812 202932097 -47755757 - AluSq SINE Alu -16 297 1 1624 148 145 0 chr2 202932403 202932707 -47755147 - MER7A DNA MER2_type 0 346 1 261 179 64 51 chr2 202933023 202933101 -47754753 + MIR SINE MIR 108 186 -76 941 254 56 56 chr2 202934183 202934542 -47753312 - MLT1A1 LTR MaLR -6 359 1 2127 116 3 3 chr2 202935159 202935461 -47752393 - AluSq SINE Alu -11 302 1 2565 58 0 6 chr2 202936697 202937010 -47750844 - AluY SINE Alu 0 311 1 2256 116 6 3 chr2 202937535 202937846 -47750008 - AluSx SINE Alu 0 312 1 283 120 0 3 chr2 202938711 202938762 -47749092 + Alu SINE Alu 254 297 -5 2176 112 3 0 chr2 202939283 202939579 -47748275 - AluSx SINE Alu -10 302 6 1793 157 46 0 chr2 202939729 202940009 -47747845 + AluSx SINE Alu 1 293 -19 2368 96 3 6 chr2 202940464 202940776 -47747078 - AluSq SINE Alu -2 311 1 27 0 0 0 chr2 202942003 202942030 -47745824 + AT_rich Low_complexity Low_complexity 1 27 0 2274 93 3 34 chr2 202942373 202942694 -47745160 - AluSq SINE Alu -2 311 1 396 330 43 32 chr2 202942716 202942901 -47744953 + MIR SINE MIR 2 188 -74 2337 76 26 7 chr2 202942918 202943222 -47744632 - AluSg SINE Alu 0 310 1 2302 78 10 16 chr2 202943852 202944158 -47743696 + AluSx SINE Alu 1 304 -8 749 293 77 34 chr2 202944870 202945403 -47742451 - HAL1 LINE L1 -41 2466 1911 183 129 0 0 chr2 202945412 202945443 -47742411 + (T)n Simple_repeat Simple_repeat 1 31 0 418 232 92 73 chr2 202945457 202945621 -47742233 - HAL1 LINE L1 -1804 703 537 1125 180 28 28 chr2 202945625 202945842 -47742012 - MER20 DNA MER1_type 0 219 3 2226 103 0 26 chr2 202946106 202946416 -47741438 - AluSx SINE Alu -10 302 1 660 249 111 23 chr2 202946751 202946968 -47740886 - HAL1 LINE L1 -2109 398 163 824 168 136 11 chr2 202947009 202947200 -47740654 + MER20 DNA MER1_type 2 216 -3 367 169 0 15 chr2 202947258 202947323 -47740531 + HsTC2 DNA Tc2 1230 1293 -605 347 222 25 12 chr2 202947345 202947426 -47740428 + L2 LINE L2 2243 2324 -990 2994 175 30 15 chr2 202947438 202947970 -47739884 - MLT2B3 LTR ERVL -14 540 1 1938 256 98 7 chr2 202947970 202948686 -47739168 + L2 LINE L2 2322 3092 -221 866 225 0 0 chr2 202948695 202948884 -47738970 - AluSg/x SINE Alu 0 317 129 2044 105 11 4 chr2 202949054 202949354 -47738500 + AluSx SINE Alu 6 307 0 2128 113 0 33 chr2 202949633 202949934 -47737920 + AluSx SINE Alu 1 291 -21 246 62 0 0 chr2 202949934 202949966 -47737888 + (TA)n Simple_repeat Simple_repeat 2 33 0 349 259 119 21 chr2 202950097 202950240 -47737614 - MIR SINE MIR -17 245 89 21 0 0 0 chr2 202950438 202950459 -47737395 + AT_rich Low_complexity Low_complexity 1 21 0 623 297 70 11 chr2 202950548 202950733 -47737121 - MIR SINE MIR -64 198 3 1948 146 7 3 chr2 202950959 202951268 -47736586 - AluSx SINE Alu -2 310 1 2049 123 7 13 chr2 202951911 202952213 -47735641 - AluSx SINE Alu -12 300 1 624 239 84 0 chr2 202952314 202952527 -47735327 - L1MC4 LINE L1 -3 8039 7809 198 253 157 12 chr2 202952662 202952745 -47735109 - L2 LINE L2 0 3313 3219 702 143 0 9 chr2 202952747 202952852 -47735002 + AluSq/x SINE Alu 2 105 -208 1218 129 0 5 chr2 203003218 203003404 -47684450 + AluSg/x SINE Alu 121 305 -7 1091 160 5 42 chr2 203003431 203003644 -47684210 - AluJo SINE Alu -22 290 86 288 255 155 31 chr2 203003740 203003901 -47683953 - MIR3 SINE MIR -8 200 20 552 209 52 9 chr2 203004141 203004256 -47683598 - FLAM_A SINE Alu -9 124 5 1992 121 45 0 chr2 203004291 203004580 -47683274 + AluSq SINE Alu 1 302 -11 2033 99 0 0 chr2 203004757 203005019 -47682835 - AluY SINE Alu -49 262 1 2711 246 77 52 chr2 203005021 203006312 -47681542 + L2 LINE L2 1998 3313 0 2193 118 0 16 chr2 203006348 203006662 -47681192 + AluSx SINE Alu 3 311 -1 1474 153 4 21 chr2 203006793 203007035 -47680819 + AluSx SINE Alu 61 298 -14 243 271 94 0 chr2 203007084 203007169 -47680685 - L1ME LINE L1 -204 5917 5825 2199 131 0 6 chr2 203007180 203007492 -47680362 + AluSx SINE Alu 3 312 0 269 333 20 10 chr2 203007517 203007619 -47680235 + L2 LINE L2 2514 2616 -698 868 181 114 94 chr2 203007677 203008111 -47679743 - Charlie4a DNA MER1_type -32 476 2 709 312 71 64 chr2 203008116 203008427 -47679427 + L2 LINE L2 2763 3070 -243 1697 179 0 22 chr2 203008427 203008740 -47679114 - AluJo SINE Alu -6 306 1 709 312 71 64 chr2 203008740 203008819 -47679035 + L2 LINE L2 3070 3147 -166 2182 121 3 0 chr2 203008819 203009126 -47678728 - AluSx SINE Alu 0 312 5 709 312 71 64 chr2 203009126 203009283 -47678571 + L2 LINE L2 3147 3313 0 555 138 0 112 chr2 203009484 203009600 -47678254 - FLAM_C SINE Alu 0 143 41 1176 146 10 34 chr2 203009601 203009806 -47678048 + AluJb SINE Alu 100 299 -13 2128 111 0 7 chr2 203009980 203010278 -47677576 + AluSg SINE Alu 2 297 -13 750 74 19 9 chr2 203010278 203010376 -47677478 - L1MA3 LINE L1 -7 6298 6197 1762 174 0 3 chr2 203010376 203010669 -47677185 - AluJo SINE Alu -15 297 6 966 182 61 0 chr2 203010711 203010876 -47676978 + FAM SINE Alu 1 175 0 272 349 138 4 chr2 203011334 203011595 -47676259 - L3b LINE CR1 -150 1433 1138 1773 144 95 3 chr2 203011754 203012060 -47675794 + MSTA LTR MaLR 1 334 -94 1193 96 56 0 chr2 203012074 203012271 -47675583 + AluSg SINE Alu 1 208 -102 2640 30 13 0 chr2 203012381 203012681 -47675173 + L1PA4 LINE L1 5850 6153 -2 358 256 197 75 chr2 203012790 203013028 -47674826 + L1MC4a LINE L1 5314 5522 -599 1474 152 144 0 chr2 203013028 203013278 -47674576 + AluJb SINE Alu 1 286 -26 358 256 197 75 chr2 203013278 203013426 -47674428 + L1MC4a LINE L1 5522 5651 -470 2100 120 0 13 chr2 203013426 203013727 -47674127 + AluSx SINE Alu 5 301 -11 358 256 197 75 chr2 203013727 203013852 -47674002 + L1MC4a LINE L1 5651 5824 -297 221 309 0 0 chr2 203013884 203013965 -47673889 + (TA)n Simple_repeat Simple_repeat 1 81 0 2219 101 0 0 chr2 203014124 203014410 -47673444 + AluSq SINE Alu 1 286 -27 29 28 0 0 chr2 203014775 203014811 -47673043 + AT_rich Low_complexity Low_complexity 1 36 0 657 306 62 12 chr2 203015042 203015378 -47672476 + L1ME LINE L1 5257 5609 -2199 474 266 138 11 chr2 203015387 203015575 -47672279 - MIR SINE MIR 0 262 51 242 288 90 18 chr2 203015593 203015704 -47672150 + L1ME LINE L1 5610 5728 -393 327 275 83 58 chr2 203015748 203015868 -47671986 - L2 LINE L2 -13 3259 3137 2091 141 0 0 chr2 203015999 203016303 -47671551 + AluSx SINE Alu 1 304 -8 1536 196 18 14 chr2 203016655 203016941 -47670913 - AluJb SINE Alu -25 287 1 1827 161 10 10 chr2 203017120 203017431 -47670423 - AluJb SINE Alu -1 311 1 2041 222 114 28 chr2 203017540 203018059 -47669795 - L1ME1 LINE L1 -8 6158 5578 1576 164 96 4 chr2 203018059 203018339 -47669515 - AluJb SINE Alu -6 306 1 2041 222 114 28 chr2 203018339 203018422 -47669432 - L1ME1 LINE L1 -588 5578 5504 1818 147 0 100 chr2 203019287 203019627 -47668227 + AluJb SINE Alu 3 308 -4 319 270 234 9 chr2 203019628 203019739 -47668115 - MER5A DNA MER1_type 0 189 54 2466 68 0 0 chr2 203020518 203020812 -47667042 + AluSc SINE Alu 1 294 -15 949 158 18 6 chr2 203020847 203021018 -47666836 + AluY SINE Alu 1 173 -138 2264 116 0 0 chr2 203021220 203021521 -47666333 - AluSg SINE Alu -9 301 1 1670 188 7 7 chr2 203021524 203021817 -47666037 - AluJb SINE Alu -19 293 1 1883 155 13 7 chr2 203022320 203022623 -47665231 - AluJo SINE Alu -7 305 1 1242 176 133 0 chr2 203022626 203022882 -47664972 - AluJo SINE Alu -22 290 1 496 144 10 31 chr2 203023184 203023281 -47664573 - L1MA4 LINE L1 -6 6294 6200 24 0 0 0 chr2 203023676 203023700 -47664154 + AT_rich Low_complexity Low_complexity 1 24 0 2244 92 0 19 chr2 203023777 203024092 -47663762 + AluSc SINE Alu 1 309 0 757 205 0 0 chr2 203024187 203024309 -47663545 - FLAM_A SINE Alu -11 122 1 360 219 118 25 chr2 203024629 203024748 -47663106 - L1ME3A LINE L1 -7 6163 6034 2057 131 7 3 chr2 203024753 203025050 -47662804 - AluJb SINE Alu -14 298 1 2258 117 0 3 chr2 203025229 203025537 -47662317 + AluSg SINE Alu 1 307 -3 23 0 0 0 chr2 203025659 203025682 -47662172 + AT_rich Low_complexity Low_complexity 1 23 0 2014 151 3 3 chr2 203026130 203026435 -47661419 - AluSx SINE Alu -7 305 1 279 351 44 49 chr2 203026441 203026646 -47661208 - MIR SINE MIR -40 222 19 4578 183 45 17 chr2 203026749 203027033 -47660821 + L1MB5 LINE L1 4986 5261 -913 180 77 0 0 chr2 203027033 203027059 -47660795 + (TA)n Simple_repeat Simple_repeat 2 27 0 4578 183 45 17 chr2 203027059 203027932 -47659922 + L1MB5 LINE L1 5261 6173 -1 24 32 0 0 chr2 203028688 203028719 -47659135 + AT_rich Low_complexity Low_complexity 1 31 0 439 250 113 90 chr2 203029092 203029348 -47658506 + MIR SINE MIR 1 262 0 387 263 188 25 chr2 203029574 203029814 -47658040 + L1ME LINE L1 5533 5811 -310 4731 243 43 31 chr2 203029905 203030662 -47657192 - L1M4 LINE L1 -1595 4551 3805 1472 213 4 0 chr2 203030662 203030968 -47656886 - AluJo SINE Alu 0 313 7 4731 243 43 31 chr2 203030968 203031658 -47656196 - L1M4 LINE L1 -2341 3805 3079 2282 119 0 0 chr2 203031658 203031969 -47655885 - AluSx SINE Alu -1 311 1 4731 243 43 31 chr2 203031969 203032060 -47655794 - L1M4 LINE L1 -3067 3079 2991 21 57 0 0 chr2 203032480 203032515 -47655339 + AT_rich Low_complexity Low_complexity 1 35 0 1945 230 56 47 chr2 203032986 203033252 -47654602 - LTR40a LTR ERVL 0 519 244 2294 99 0 3 chr2 203033252 203033554 -47654300 - AluSg SINE Alu -8 302 2 1945 230 56 47 chr2 203033554 203033801 -47654053 - LTR40a LTR ERVL -275 244 1 195 139 0 0 chr2 203034193 203034229 -47653625 + (A)n Simple_repeat Simple_repeat 1 36 0 639 243 65 18 chr2 203034247 203034416 -47653438 + MER5B DNA MER1_type 2 178 0 570 250 11 51 chr2 203034423 203034599 -47653255 - MER5B DNA MER1_type -6 172 4 314 186 289 10 chr2 203034932 203035029 -47652825 + L2 LINE L2 3189 3312 -1 2355 90 0 22 chr2 203035160 203035472 -47652382 + AluSx SINE Alu 1 305 -7 1954 153 0 13 chr2 203035677 203035984 -47651870 - AluSx SINE Alu -9 303 1 774 169 0 39 chr2 203035995 203036125 -47651729 - FLAM_A SINE Alu -6 127 3 258 256 58 50 chr2 203036452 203036501 -47651353 - L1ME4a LINE L1 -30 6091 6044 2428 70 3 0 chr2 203036501 203036799 -47651055 + AluSc SINE Alu 1 299 -10 258 256 58 50 chr2 203036799 203036870 -47650984 - L1ME4a LINE L1 -77 6044 5970 1930 120 7 33 chr2 203037074 203037375 -47650479 - AluJb SINE Alu -9 303 11 1898 117 40 7 chr2 203037619 203037892 -47649962 - AluSx SINE Alu -30 282 1 2460 66 0 3 chr2 203038258 203038562 -47649292 + AluY SINE Alu 1 303 -8 414 57 0 0 chr2 203038562 203038615 -47649239 + (TA)n Simple_repeat Simple_repeat 2 54 0 1338 169 51 4 chr2 203038653 203038890 -47648964 + AluJb SINE Alu 1 248 -64 213 39 0 0 chr2 203038894 203038920 -47648934 + (A)n Simple_repeat Simple_repeat 1 26 0 610 227 39 0 chr2 203039182 203039310 -47648544 + FLAM_A SINE Alu 10 142 0 1592 197 0 26 chr2 203039367 203039671 -47648183 - AluJb SINE Alu -11 301 6 1195 45 0 0 chr2 203039721 203039853 -47648001 + AluSq/x SINE Alu 5 136 -176 2221 111 3 0 chr2 203039854 203040151 -47647703 + AluSq SINE Alu 3 300 -13 1418 124 120 85 chr2 203040203 203040486 -47647368 - AluJo SINE Alu -19 293 1 825 252 14 28 chr2 203040625 203040829 -47647025 + HsTC2a DNA Tc2 19 221 -1503 907 147 47 7 chr2 203040829 203040979 -47646875 + L1PB4 LINE L1 6001 6156 0 825 252 14 28 chr2 203040979 203040992 -47646862 + HsTC2a DNA Tc2 221 233 -511 191 59 0 29 chr2 203041021 203041055 -47646799 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 376 182 39 0 chr2 203041057 203041134 -47646720 + HsTC2a DNA Tc2 223 302 -616 976 187 76 0 chr2 203041135 203041333 -47646521 + L1MC4 LINE L1 7461 7673 -369 740 240 31 50 chr2 203041390 203041516 -47646338 + L1MC4 LINE L1 7780 7900 -142 216 97 0 0 chr2 203041516 203041547 -47646307 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 740 240 31 50 chr2 203041547 203041678 -47646176 + L1MC4 LINE L1 7900 8032 -10 290 253 35 11 chr2 203041698 203041785 -47646069 + HsTC2a DNA Tc2 282 370 -548 2237 97 0 7 chr2 203041785 203042083 -47645771 - AluSg1 SINE Alu -13 296 1 1883 150 0 23 chr2 203042089 203042395 -47645459 - AluSx SINE Alu -13 299 1 949 131 19 38 chr2 203042476 203042636 -47645218 - FRAM SINE Alu -23 153 1 1824 139 57 0 chr2 203042649 203042929 -47644925 - AluSg SINE Alu -14 296 1 2153 135 3 0 chr2 203043656 203043967 -47643887 + AluSx SINE Alu 1 312 0 264 122 82 0 chr2 203043969 203044018 -47643836 + MLT1D LTR MaLR 90 142 -363 978 265 70 30 chr2 203044123 203044302 -47643552 + L1MEc LINE L1 1875 2045 -4170 1093 204 38 5 chr2 203044302 203044513 -47643341 + MER20 DNA MER1_type 1 218 -1 978 265 70 30 chr2 203044513 203044617 -47643237 + L1MEc LINE L1 2045 2143 -4072 2384 106 0 0 chr2 203044617 203044928 -47642926 + AluY SINE Alu 1 311 0 978 265 70 30 chr2 203044928 203045359 -47642495 + L1MEc LINE L1 2143 2570 -3645 1499 178 64 4 chr2 203045359 203045640 -47642214 + AluJo SINE Alu 1 298 -14 1275 215 75 42 chr2 203045796 203046058 -47641796 + L1MEc LINE L1 2778 3030 -3185 2085 100 3 10 chr2 203046058 203046357 -47641497 + AluSc SINE Alu 1 297 -12 2337 82 20 0 chr2 203046357 203046662 -47641192 + AluSq SINE Alu 1 312 -1 2263 63 42 0 chr2 203046668 203046978 -47640876 + AluY SINE Alu 2 323 0 1275 215 75 42 chr2 203046978 203047207 -47640647 + L1MEc LINE L1 3034 3297 -2918 789 167 0 30 chr2 203047287 203047419 -47640435 + FLAM_C SINE Alu 1 128 -5 1414 239 91 75 chr2 203047435 203048037 -47639817 + LTR41 LTR ERVL 58 669 -104 287 170 0 0 chr2 203048050 203048103 -47639751 + AluJb SINE Alu 202 254 -48 1235 174 42 64 chr2 203048104 203048369 -47639485 - AluJo SINE Alu -53 259 1 941 149 0 0 chr2 203048417 203048558 -47639296 - FLAM_C SINE Alu -2 141 1 276 224 15 0 chr2 203048566 203048633 -47639221 + LTR41 LTR ERVL 705 772 -1 213 261 0 0 chr2 203048655 203048701 -47639153 + A-rich Low_complexity Low_complexity 1 46 0 1455 203 0 23 chr2 203048821 203049121 -47638733 + AluJo SINE Alu 1 293 -19 2122 116 10 0 chr2 203049123 203049416 -47638438 + AluSx SINE Alu 1 296 -16 2211 125 0 0 chr2 203049418 203049715 -47638139 + AluSx SINE Alu 1 297 -15 2258 81 7 7 chr2 203049718 203050003 -47637851 + AluSp SINE Alu 19 303 -10 322 121 0 61 chr2 203050196 203050262 -47637592 - L1ME4a LINE L1 0 6121 6060 253 272 51 32 chr2 203050275 203050433 -47637421 + L1ME LINE L1 5515 5675 -446 846 158 0 7 chr2 203050437 203050672 -47637182 + AluSx SINE Alu 2 294 -18 25 0 0 0 chr2 203050672 203050697 -47637157 + AT_rich Low_complexity Low_complexity 1 25 0 2177 134 0 6 chr2 203051023 203051364 -47636490 - AluSx SINE Alu 0 339 1 327 248 152 9 chr2 203051529 203051634 -47636220 + Charlie8 DNA MER1_type 38 157 -2260 477 180 62 47 chr2 203051721 203051840 -47636014 + MER5B DNA MER1_type 1 124 -54 1902 129 31 0 chr2 203051840 203052126 -47635728 - AluSg SINE Alu -15 295 1 1516 74 98 0 chr2 203052197 203052400 -47635454 - L1PB1 LINE L1 -1 6150 5928 1044 153 8 126 chr2 203052587 203052848 -47635006 - AluJo SINE Alu -3 309 80 2043 82 67 0 chr2 203052896 203053166 -47634688 + AluSp SINE Alu 22 309 -4 2078 91 4 4 chr2 203053331 203053606 -47634248 + AluSg1 SINE Alu 35 309 0 3526 72 19 29 chr2 203053606 203054093 -47633761 + LTR61 LTR ERV1 114 595 0 1838 215 33 52 chr2 203054093 203054880 -47632974 + HERV15 LTR ERV1 1 873 -7862 1984 121 0 0 chr2 203054880 203055152 -47632702 + AluSx SINE Alu 33 304 -8 186 133 0 0 chr2 203055152 203055182 -47632672 + (TA)n Simple_repeat Simple_repeat 1 30 0 206 190 17 17 chr2 203055249 203055307 -47632547 + T-rich Low_complexity Low_complexity 3 60 0 2162 123 3 7 chr2 203055707 203055725 -47632129 - AluSq SINE Alu -3 310 293 300 53 0 0 chr2 203055725 203055763 -47632091 + (TA)n Simple_repeat Simple_repeat 1 38 0 2162 123 3 7 chr2 203055763 203056054 -47631800 - AluSq SINE Alu -20 293 2 2612 46 0 0 chr2 203056457 203056760 -47631094 - AluY SINE Alu -8 303 1 184 364 45 0 chr2 203056896 203056962 -47630892 + L2 LINE L2 3141 3209 -63 1075 238 22 0 chr2 203057049 203057276 -47630578 + MIR SINE MIR 20 251 -11 2288 111 0 0 chr2 203057683 203057980 -47629874 - AluSx SINE Alu -15 297 1 666 208 16 16 chr2 203058181 203058306 -47629548 - FLAM_A SINE Alu -5 128 4 1577 178 0 11 chr2 203058532 203058801 -47629053 + AluJo SINE Alu 1 266 -46 240 250 16 0 chr2 203058825 203058889 -47628965 - L1P LINE L1 -1177 4969 4905 2182 113 0 0 chr2 203058999 203059291 -47628563 - AluSx SINE Alu -20 292 1 1811 156 3 33 chr2 203059297 203059599 -47628255 - AluJb SINE Alu -19 293 1 2233 108 0 3 chr2 203059679 203059966 -47627888 - AluSc SINE Alu -23 286 1 305 115 0 58 chr2 203060166 203060218 -47627636 + MIR SINE MIR 211 259 -3 2263 101 7 0 chr2 203060266 203060564 -47627290 - AluSx SINE Alu -12 300 1 913 162 60 0 chr2 203061409 203061576 -47626278 - FRAM SINE Alu -2 174 1 2461 80 56 15 chr2 203061854 203062193 -47625661 + L1PA13 LINE L1 5811 6163 0 2200 102 10 0 chr2 203062217 203062511 -47625343 + AluY SINE Alu 1 297 -14 2642 40 0 0 chr2 203062511 203062813 -47625041 + AluY SINE Alu 1 302 -9 1480 226 116 85 chr2 203063008 203063044 -47624810 - L2 LINE L2 -1682 1632 1599 2075 134 10 0 chr2 203063044 203063343 -47624511 + AluSx SINE Alu 1 302 -10 1480 226 116 85 chr2 203063343 203063553 -47624301 - L2 LINE L2 -1715 1599 1397 1986 151 3 3 chr2 203063553 203063857 -47623997 + AluJb SINE Alu 1 304 -8 2066 115 24 0 chr2 203063859 203064147 -47623707 + AluSx SINE Alu 1 295 -17 1674 117 0 32 chr2 203064147 203064394 -47623460 + AluSg SINE Alu 49 287 -23 1480 226 116 85 chr2 203064394 203064739 -47623115 - L2 LINE L2 -1916 1398 1018 1702 158 17 24 chr2 203064739 203065036 -47622818 - AluJo SINE Alu -17 295 1 337 259 328 0 chr2 203065043 203065244 -47622610 + L2 LINE L2 1620 1886 -1428 28 0 0 0 chr2 203065344 203065372 -47622482 + AT_rich Low_complexity Low_complexity 1 28 0 2237 126 0 0 chr2 203065372 203065674 -47622180 + AluSx SINE Alu 1 302 -10 932 185 11 11 chr2 203065677 203065855 -47621999 + AluJo/FRAM SINE Alu 129 306 -6 2446 237 125 66 chr2 203065860 203067139 -47620715 + L2 LINE L2 1921 3295 -18 212 0 36 0 chr2 203067389 203067417 -47620437 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1897 75 0 0 chr2 203067425 203067664 -47620190 - AluSc SINE Alu -36 273 35 691 160 9 146 chr2 203068871 203068947 -47618907 + MER5A DNA MER1_type 4 89 -100 1736 112 3 51 chr2 203068947 203069283 -47618571 + AluJb SINE Alu 2 323 0 691 160 9 146 chr2 203069283 203069418 -47618436 + MER5A DNA MER1_type 89 187 -2 398 272 120 22 chr2 203069546 203069730 -47618124 + MIR SINE MIR 40 241 -21 2205 82 4 0 chr2 203070245 203070554 -47617300 - AluSg SINE Alu 0 310 1 196 77 51 0 chr2 203070828 203070867 -47616987 + (TA)n Simple_repeat Simple_repeat 1 41 0 1020 199 75 49 chr2 203070873 203071066 -47616788 - Charlie2 DNA MER1_type -54 2808 2621 1920 112 4 0 chr2 203071066 203071326 -47616528 + AluSx SINE Alu 1 261 -51 251 0 0 56 chr2 203071327 203071363 -47616491 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1020 199 75 49 chr2 203071363 203071553 -47616301 - Charlie2 DNA MER1_type -240 2622 2413 2338 61 7 14 chr2 203071555 203071851 -47616003 + AluY SINE Alu 1 294 -17 2403 100 0 0 chr2 203072051 203072361 -47615493 - AluSg SINE Alu 0 310 1 366 135 12 55 chr2 203072361 203072448 -47615406 - Alu SINE Alu -6 295 227 656 159 79 32 chr2 203072471 203072597 -47615257 - LTR32 LTR ERVL -325 146 15 831 268 72 33 chr2 203072717 203073023 -47614831 + LTR33 LTR ERVL 198 515 -6 2111 147 0 3 chr2 203073275 203073588 -47614266 + AluSx SINE Alu 1 312 0 2434 91 0 3 chr2 203073734 203074042 -47613812 + AluSx SINE Alu 1 307 -5 2520 55 0 0 chr2 203074427 203074719 -47613135 + AluY SINE Alu 3 294 -17 2656 109 28 14 chr2 203075186 203075543 -47612311 - THE1B LTR MaLR -2 362 1 12005 85 11 2 chr2 203075548 203077107 -47610747 - THE1B-int LTR MaLR -6 1574 1 2690 105 31 3 chr2 203077109 203077461 -47610393 - THE1B LTR MaLR -2 362 1 1586 157 40 0 chr2 203077561 203077689 -47610165 - AluJo SINE Alu -53 259 138 288 0 0 0 chr2 203077689 203077721 -47610133 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1586 157 40 0 chr2 203077721 203077841 -47610013 - AluJo SINE Alu -174 138 1 594 211 191 0 chr2 203077842 203077994 -47609860 + MER58A DNA MER1_type 44 224 0 303 267 50 0 chr2 203078050 203078136 -47609718 - MER115 DNA AcHobo -61 632 542 410 205 49 57 chr2 203078136 203078233 -47609621 - MER39 LTR ERV1 0 707 610 2559 69 0 0 chr2 203078233 203078537 -47609317 + AluY SINE Alu 1 304 -7 410 205 49 57 chr2 203078537 203078561 -47609293 - MER39 LTR ERV1 -97 610 587 2244 113 0 7 chr2 203078562 203078862 -47608992 + AluSx SINE Alu 1 298 -14 803 161 8 16 chr2 203078862 203078986 -47608868 - FRAM SINE Alu -60 116 1 2118 168 126 7 chr2 203079038 203079462 -47608392 - MLT2B2 LTR ERVL -7 547 2 333 269 9 28 chr2 203079466 203079574 -47608280 - L1M4 LINE L1 -2354 3792 3687 279 79 0 0 chr2 203079574 203079612 -47608242 + (TGGGGG)n Simple_repeat Simple_repeat 5 42 0 2043 152 7 0 chr2 203079633 203079935 -47607919 - AluSx SINE Alu -8 304 1 401 230 80 0 chr2 203080502 203080602 -47607252 - HAL1 LINE L1 -2325 182 75 975 112 0 0 chr2 203080602 203080727 -47607127 + AluSq/x SINE Alu 1 125 -187 271 231 0 0 chr2 203080752 203080804 -47607050 + MER8 DNA MER2_type 105 156 -83 834 200 172 0 chr2 203080804 203080984 -47606870 - AluJb SINE Alu -13 299 89 647 137 0 11 chr2 203080985 203081080 -47606774 + MER8 DNA MER2_type 146 239 0 979 180 0 0 chr2 203081501 203081662 -47606192 - FRAM SINE Alu -15 161 1 1457 169 115 0 chr2 203081785 203082045 -47605809 - AluJo SINE Alu -22 290 1 29 0 0 0 chr2 203083992 203084021 -47603833 + AT_rich Low_complexity Low_complexity 1 29 0 199 298 106 43 chr2 203085164 203085258 -47602596 - MER5B DNA MER1_type -78 100 1 1710 178 7 0 chr2 203085295 203085581 -47602273 - AluJo SINE Alu -24 288 1 203 61 30 0 chr2 203085922 203085955 -47601899 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 38 0 0 0 chr2 203086096 203086134 -47601720 + AT_rich Low_complexity Low_complexity 1 38 0 2334 96 0 0 chr2 203086991 203087284 -47600570 - AluSg SINE Alu -17 293 1 2252 113 0 13 chr2 203087613 203087914 -47599940 - AluSg SINE Alu -13 297 1 23 54 0 0 chr2 203089201 203089238 -47598616 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 203090263 203090292 -47597562 + AT_rich Low_complexity Low_complexity 1 29 0 1922 156 0 0 chr2 203090384 203090666 -47597188 + AluSx SINE Alu 1 282 -30 186 43 0 0 chr2 203090690 203090713 -47597141 + (TAA)n Simple_repeat Simple_repeat 3 25 0 21 57 0 0 chr2 203090812 203090847 -47597007 + AT_rich Low_complexity Low_complexity 1 35 0 932 105 30 8 chr2 203090893 203091026 -47596828 - AluJo SINE Alu -176 136 1 266 385 34 0 chr2 203091231 203091348 -47596506 + L2 LINE L2 3193 3313 0 1877 177 0 0 chr2 203091459 203091759 -47596095 - AluJb SINE Alu -12 300 1 2220 80 3 54 chr2 203091781 203091950 -47595904 - AluSc SINE Alu -11 298 122 201 39 0 0 chr2 203091950 203091976 -47595878 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2135 86 3 34 chr2 203091976 203092268 -47595586 - AluSc SINE Alu -26 283 1 2220 80 3 54 chr2 203092268 203092411 -47595443 - AluSc SINE Alu -185 124 1 2125 115 0 0 chr2 203092882 203093161 -47594693 - AluSx SINE Alu -33 279 1 366 316 0 0 chr2 203094178 203094295 -47593559 - MIR3 SINE MIR -2 206 90 2287 100 3 3 chr2 203095030 203095329 -47592525 - AluSx SINE Alu -13 299 1 2048 138 3 3 chr2 203095466 203095770 -47592084 + AluSx SINE Alu 1 304 -8 1704 174 14 24 chr2 203096002 203096295 -47591559 - AluJo SINE Alu -22 290 1 27 73 0 0 chr2 203096316 203096371 -47591483 + AT_rich Low_complexity Low_complexity 1 55 0 2296 92 0 10 chr2 203096977 203097272 -47590582 - AluY SINE Alu -17 294 3 2302 104 0 0 chr2 203097274 203097573 -47590281 - AluSx SINE Alu -13 299 1 1749 148 7 46 chr2 203097603 203097906 -47589948 + AluJo SINE Alu 1 291 -21 297 0 0 0 chr2 203097907 203097940 -47589914 + (CA)n Simple_repeat Simple_repeat 2 34 0 496 278 32 89 chr2 203099168 203099359 -47588495 - HAL1b LINE L1 -971 377 216 1776 156 0 20 chr2 203099359 203099654 -47588200 - AluJb SINE Alu -23 289 1 496 278 32 89 chr2 203099654 203099832 -47588022 - HAL1b LINE L1 -1132 216 29 6146 57 9 14 chr2 203099856 203101274 -47586580 - SVA Other Other -799 1254 1 227 143 24 0 chr2 203101374 203101416 -47586438 - L1MA3 LINE L1 -9 6296 6254 250 235 51 20 chr2 203101850 203101948 -47585906 + L1P LINE L1 3588 3688 -2458 340 342 33 7 chr2 203101975 203102127 -47585727 + L1 LINE L1 3737 3892 -2254 866 214 30 38 chr2 203102150 203102412 -47585442 + L1MC4 LINE L1 7689 7948 -94 281 295 110 15 chr2 203102526 203102726 -47585128 + L1P LINE L1 4015 4233 -1913 393 290 87 79 chr2 203102727 203103056 -47584798 + L1 LINE L1 4224 4558 -1588 1597 131 7 53 chr2 203103056 203103339 -47584515 + AluJb SINE Alu 39 308 -4 393 290 87 79 chr2 203103339 203103378 -47584476 + L1 LINE L1 4558 4595 -1551 2254 100 0 13 chr2 203103429 203103738 -47584116 + AluSc SINE Alu 1 305 -4 738 217 51 0 chr2 203103942 203104099 -47583755 - AluJb SINE Alu -22 290 126 1428 128 0 120 chr2 203104183 203104457 -47583397 + AluJb SINE Alu 3 243 -69 196 297 78 31 chr2 203106723 203106851 -47581003 - L2 LINE L2 -1 3312 3179 2048 107 3 37 chr2 203106955 203107119 -47580735 - AluSx SINE Alu -23 289 138 2405 78 0 3 chr2 203107119 203107425 -47580429 - AluY SINE Alu -6 305 1 2048 107 3 37 chr2 203107425 203107559 -47580295 - AluSx SINE Alu -174 138 1 1040 115 290 14 chr2 203107895 203108112 -47579742 + AluSg1 SINE Alu 21 297 -12 487 195 0 0 chr2 203108494 203108581 -47579273 - AluSg/x SINE Alu -9 301 215 1053 130 0 53 chr2 203108582 203108751 -47579103 - AluJb SINE Alu -152 160 1 1890 138 35 3 chr2 203108783 203109073 -47578781 - AluJb SINE Alu -13 299 1 1849 140 26 0 chr2 203109520 203109792 -47578062 + AluJb SINE Alu 34 312 0 2182 123 0 3 chr2 203109864 203110174 -47577680 - AluSq SINE Alu -4 309 1 647 170 0 0 chr2 203110213 203110313 -47577541 - AluJ/FLAM SINE Alu -212 100 1 220 288 17 0 chr2 203111102 203111161 -47576693 - MIR SINE MIR -10 252 193 32 26 0 0 chr2 203111166 203111205 -47576649 + AT_rich Low_complexity Low_complexity 1 39 0 3080 166 12 37 chr2 203111716 203112290 -47575564 + MER68 LTR ERV1 3 562 0 2174 61 61 4 chr2 203112606 203112884 -47574970 - AluY SINE Alu -17 294 1 482 210 10 20 chr2 203113010 203113110 -47574744 + MER58 DNA MER1_type 1 99 -242 424 195 0 0 chr2 203113122 203113199 -47574655 + MER58 DNA MER1_type 2318 2394 -26 21 71 0 0 chr2 203113414 203113456 -47574398 + AT_rich Low_complexity Low_complexity 1 42 0 31 0 0 0 chr2 203114277 203114308 -47573546 + AT_rich Low_complexity Low_complexity 1 31 0 234 372 132 8 chr2 203114327 203114448 -47573406 + L2 LINE L2 3117 3252 -20 2241 135 0 0 chr2 203114528 203114840 -47573014 + AluSx SINE Alu 1 312 0 2295 94 0 3 chr2 203115117 203115414 -47572440 + AluSq SINE Alu 4 299 -14 199 363 62 0 chr2 203116022 203116102 -47571752 + MIR SINE MIR 29 113 -149 24 91 0 0 chr2 203116414 203116480 -47571374 + AT_rich Low_complexity Low_complexity 1 66 0 450 0 0 0 chr2 203117590 203117640 -47570214 + (TG)n Simple_repeat Simple_repeat 2 51 0 2291 101 3 0 chr2 203117649 203117945 -47569909 - AluSx SINE Alu -15 297 1 22 56 0 0 chr2 203118036 203118072 -47569782 + AT_rich Low_complexity Low_complexity 1 36 0 1732 165 7 10 chr2 203118113 203118422 -47569432 + AluJo SINE Alu 1 308 -4 22 0 0 0 chr2 203119338 203119360 -47568494 + AT_rich Low_complexity Low_complexity 1 22 0 249 344 16 25 chr2 203119917 203120039 -47567815 + MLT1-int LTR MaLR 421 541 -830 2256 83 0 17 chr2 203120042 203120342 -47567512 - AluSx SINE Alu -17 295 1 189 0 0 0 chr2 203120411 203120432 -47567422 + (A)n Simple_repeat Simple_repeat 1 21 0 1527 163 35 4 chr2 203120442 203120699 -47567155 + AluJb SINE Alu 1 265 -47 234 0 0 0 chr2 203121156 203121182 -47566672 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 679 244 189 0 chr2 203121572 203121752 -47566102 + MER58A DNA MER1_type 10 223 -1 577 283 214 49 chr2 203121855 203122259 -47565595 + MLT1H1 LTR MaLR 5 500 -55 1152 67 0 7 chr2 203122259 203122409 -47565445 - L1PA7 LINE L1 -1 6153 6005 577 283 214 49 chr2 203122409 203122477 -47565377 + MLT1H1 LTR MaLR 500 555 0 1253 200 105 58 chr2 203122505 203122885 -47564969 + MER65A LTR ERV1 1 398 -47 911 129 0 0 chr2 203122886 203123010 -47564844 - FLAM_A SINE Alu -9 133 10 31 26 0 0 chr2 203123107 203123145 -47564709 + AT_rich Low_complexity Low_complexity 1 38 0 2052 130 0 0 chr2 203123348 203123647 -47564207 - AluSx SINE Alu -9 303 5 2152 112 6 13 chr2 203123696 203124008 -47563846 - AluSx SINE Alu -2 310 1 381 277 0 0 chr2 203125224 203125307 -47562547 + MLT1L LTR MaLR 1 83 -532 436 281 96 48 chr2 203125384 203125653 -47562201 + MLT1L LTR MaLR 251 451 -60 551 300 9 48 chr2 203126426 203126568 -47561286 - MER58A DNA MER1_type -2196 224 93 1949 141 20 0 chr2 203126568 203126866 -47560988 + AluJb SINE Alu 1 304 -8 551 300 9 48 chr2 203126866 203126950 -47560904 - MER58A DNA MER1_type -2327 93 7 2092 115 17 0 chr2 203127726 203128013 -47559841 + AluSx SINE Alu 1 292 -20 222 143 26 52 chr2 203128262 203128313 -47559541 + (TTTAA)n Simple_repeat Simple_repeat 5 55 -24 975 152 0 12 chr2 203128313 203128477 -47559377 - FAM SINE Alu -13 162 1 222 143 26 52 chr2 203128477 203128502 -47559352 + (TTTAA)n Simple_repeat Simple_repeat 55 79 0 23 0 0 0 chr2 203128773 203128796 -47559058 + AT_rich Low_complexity Low_complexity 1 23 0 4172 157 28 73 chr2 203128853 203129333 -47558521 - L1MB7 LINE L1 -20 6164 5664 1977 153 3 6 chr2 203129333 203129646 -47558208 + AluSx SINE Alu 1 312 0 4172 157 28 73 chr2 203129646 203129761 -47558093 - L1MB7 LINE L1 -520 5664 5545 2210 123 0 0 chr2 203129761 203130062 -47557792 - AluSx SINE Alu -11 301 1 4172 157 28 73 chr2 203130062 203130399 -47557455 - L1MB7 LINE L1 -639 5545 5273 778 143 0 24 chr2 203130410 203130536 -47557318 - FLAM_A SINE Alu -10 132 10 254 152 179 98 chr2 203130541 203130620 -47557234 - L1MB7 LINE L1 -855 5291 5199 1883 177 3 3 chr2 203130620 203130930 -47556924 - AluJb SINE Alu -2 310 1 254 152 179 98 chr2 203130930 203130962 -47556892 - L1MB7 LINE L1 -947 5199 5171 1966 133 7 23 chr2 203131054 203131356 -47556498 - AluSx SINE Alu -15 297 1 583 139 0 12 chr2 203131404 203131627 -47556227 + AluSx SINE Alu 36 302 -10 351 0 0 0 chr2 203132903 203132942 -47554912 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1897 90 4 0 chr2 203132946 203133190 -47554664 - AluY SINE Alu -66 245 1 526 246 124 37 chr2 203133198 203133552 -47554302 - L1ME4a LINE L1 -5 6116 5732 243 0 0 0 chr2 203133557 203133584 -47554270 + (T)n Simple_repeat Simple_repeat 1 27 0 2349 101 0 0 chr2 203135261 203135559 -47552295 - AluSx SINE Alu -11 301 4 27 0 0 0 chr2 203135675 203135702 -47552152 + AT_rich Low_complexity Low_complexity 1 27 0 1611 208 3 3 chr2 203136168 203136476 -47551378 - AluJo SINE Alu -2 310 3 24 32 0 0 chr2 203136498 203136529 -47551325 + AT_rich Low_complexity Low_complexity 1 31 0 1993 119 35 3 chr2 203136530 203136816 -47551038 - AluSq SINE Alu -18 295 1 180 0 0 0 chr2 203137407 203137427 -47550427 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2107 92 0 7 chr2 203137430 203137712 -47550142 - AluSx SINE Alu -32 280 1 225 97 0 0 chr2 203138140 203138171 -47549683 - L1MB7 LINE L1 -45 6139 6109 309 98 98 0 chr2 203138178 203138239 -47549615 - Alu SINE Alu -3 297 231 987 113 0 21 chr2 203138240 203138382 -47549472 - AluJb SINE Alu -173 139 1 986 196 0 5 chr2 203138407 203138596 -47549258 - L1MB7 LINE L1 -77 6107 5920 2330 103 0 0 chr2 203138887 203139187 -47548667 - AluSg SINE Alu -10 300 1 2195 98 11 0 chr2 203139212 203139497 -47548357 - AluSq SINE Alu -25 288 1 375 263 53 47 chr2 203139792 203139963 -47547891 - LTR16B LTR ERVL 0 464 293 301 296 45 0 chr2 203139982 203140070 -47547784 - MIR SINE MIR -158 104 13 2204 87 3 30 chr2 203140946 203141244 -47546610 + AluSp SINE Alu 1 290 -23 1934 146 7 13 chr2 203141739 203142040 -47545814 - AluJb SINE Alu -13 299 1 2352 93 3 0 chr2 203142644 203142945 -47544909 + AluSp SINE Alu 5 306 -7 366 151 0 0 chr2 203143545 203143598 -47544256 - AluJb SINE Alu -16 286 234 644 196 109 2 chr2 203143704 203143963 -47543891 + L1ME2 LINE L1 5152 5442 -722 * 983 211 139 50 chr2 203143958 203144418 -47543436 + L1ME2 LINE L1 5687 6164 -2 515 219 62 67 chr2 203144406 203144616 -47543238 + L1MC4a LINE L1 6345 6536 -1272 * 2006 124 13 23 chr2 203144630 203144929 -47542925 - AluSx SINE Alu -16 296 1 1159 220 21 8 chr2 203145100 203145336 -47542518 - AluJb SINE Alu -73 239 1 2106 132 3 3 chr2 203145477 203145781 -47542073 + AluSx SINE Alu 1 304 -8 1303 216 7 29 chr2 203145951 203146117 -47541737 - AluJo SINE Alu -13 299 131 495 0 0 0 chr2 203146117 203146172 -47541682 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 2115 107 0 4 chr2 203146172 203146452 -47541402 - AluSc SINE Alu -30 279 1 2481 80 0 0 chr2 203146454 203146755 -47541099 - AluY SINE Alu -10 301 1 1303 216 7 29 chr2 203146755 203146890 -47540964 - AluJo SINE Alu -181 131 1 1064 248 61 18 chr2 203147003 203147398 -47540456 + L1M4b LINE L1 1202 1613 -5246 2248 109 0 3 chr2 203147420 203147723 -47540131 + AluSq SINE Alu 1 302 -11 3300 186 37 64 chr2 203147730 203148591 -47539263 + L1MB7 LINE L1 5324 6161 -23 1812 147 10 35 chr2 203148673 203148985 -47538869 + AluJb SINE Alu 1 304 -8 256 244 23 23 chr2 203149003 203149089 -47538765 + L1M4b LINE L1 2443 2528 -4610 523 257 95 30 chr2 203149295 203149665 -47538189 - L1M4 LINE L1 -2643 3503 3110 359 221 32 0 chr2 203149681 203149776 -47538078 - L1M4 LINE L1 -3135 3011 2914 22 0 0 0 chr2 203149948 203149970 -47537884 + AT_rich Low_complexity Low_complexity 1 22 0 297 333 238 5 chr2 203150652 203150862 -47536992 + MIR SINE MIR 4 262 0 229 336 86 75 chr2 203151428 203152053 -47535801 - L2 LINE L2 -660 2654 2018 1817 163 3 38 chr2 203152053 203152372 -47535482 + AluJo SINE Alu 1 308 -4 229 336 86 75 chr2 203152372 203152481 -47535373 - L2 LINE L2 -1296 2018 1912 1776 193 3 10 chr2 203152537 203152837 -47535017 - AluJo SINE Alu -14 298 1 1146 166 70 10 chr2 203152847 203153046 -47534808 - AluJb SINE Alu -11 301 91 2340 62 31 0 chr2 203153548 203153837 -47534017 - AluY SINE Alu -13 298 1 1584 167 10 46 chr2 203154357 203154663 -47533191 + AluJb SINE Alu 1 295 -17 189 0 0 0 chr2 203154742 203154763 -47533091 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2027 97 7 11 chr2 203154767 203155046 -47532808 - AluSq SINE Alu -35 278 1 1900 76 0 4 chr2 203155196 203155432 -47532422 - AluSq SINE Alu -16 297 63 2267 97 7 7 chr2 203155711 203156010 -47531844 - AluSx SINE Alu -13 299 1 243 292 77 60 chr2 203156564 203156732 -47531122 + L2 LINE L2 2598 2768 -546 539 335 70 16 chr2 203157001 203157243 -47530611 + MIR SINE MIR 3 257 -5 23 0 0 0 chr2 203157279 203157302 -47530552 + AT_rich Low_complexity Low_complexity 1 23 0 259 348 43 0 chr2 203157306 203157421 -47530433 + L2 LINE L2 3192 3311 -2 2521 66 3 0 chr2 203157655 203157956 -47529898 + AluSx SINE Alu 1 302 -10 577 181 4 6 chr2 203157962 203158211 -47529643 + AluJ SINE Alu 1 297 -15 2295 88 10 0 chr2 203158492 203158786 -47529068 + AluSx SINE Alu 1 297 -15 304 244 131 25 chr2 203158947 203159107 -47528747 + L1MC5 LINE L1 7472 7648 -313 272 330 0 0 chr2 203159210 203159307 -47528547 + L1MC4 LINE L1 7930 8026 -16 1607 205 0 24 chr2 203159392 203159689 -47528165 + AluJo SINE Alu 1 290 -22 2160 72 17 0 chr2 203159905 203160195 -47527659 - AluY SINE Alu -16 295 1 2012 128 3 3 chr2 203160261 203160551 -47527303 - AluSx SINE Alu -14 298 9 1821 129 13 61 chr2 203160571 203160881 -47526973 - AluJo SINE Alu -12 300 6 1721 166 25 3 chr2 203161663 203161946 -47525908 + AluJb SINE Alu 15 303 -9 2105 110 27 10 chr2 203161955 203162256 -47525598 + AluSq SINE Alu 1 306 -7 2064 148 3 0 chr2 203162327 203162637 -47525217 + AluSx SINE Alu 1 311 -1 1413 169 46 102 chr2 203163094 203163257 -47524597 + MLT1B LTR MaLR 1 172 -218 2437 63 0 3 chr2 203163257 203163557 -47524297 + AluY SINE Alu 1 299 -12 1413 169 46 102 chr2 203163557 203163806 -47524048 + MLT1B LTR MaLR 172 390 0 2037 105 51 3 chr2 203165723 203166018 -47521836 + AluSg SINE Alu 1 309 -1 1271 195 113 0 chr2 203166061 203166317 -47521537 - AluJo SINE Alu -23 289 5 2092 96 0 0 chr2 203166363 203166623 -47521231 + AluSc SINE Alu 49 308 -1 1645 178 7 18 chr2 203166659 203166990 -47520864 - AluJb SINE Alu 0 328 1 2379 81 0 0 chr2 203167559 203167854 -47520000 + AluSq SINE Alu 1 295 -18 1692 192 7 10 chr2 203168002 203168304 -47519550 - AluSx SINE Alu -11 301 1 1690 190 31 0 chr2 203168323 203168612 -47519242 - AluJb SINE Alu -14 298 1 2363 82 0 16 chr2 203168676 203168982 -47518872 + AluY SINE Alu 1 301 -10 23 0 0 0 chr2 203170015 203170038 -47517816 + AT_rich Low_complexity Low_complexity 1 23 0 311 284 49 0 chr2 203171164 203171266 -47516588 - MIR SINE MIR -7 255 149 3925 218 65 30 chr2 203171826 203171897 -47515957 + L1PA15 LINE L1 1767 1834 -4312 2261 71 7 17 chr2 203171897 203172193 -47515661 - AluY SINE Alu -14 297 5 3925 218 65 30 chr2 203172193 203172222 -47515632 + L1PA15 LINE L1 1834 1861 -4285 2056 128 13 0 chr2 203172222 203172528 -47515326 + AluSg SINE Alu 1 310 0 3925 218 65 30 chr2 203172528 203173576 -47514278 + L1PA15 LINE L1 1861 2956 -3190 1379 164 5 5 chr2 203173953 203174167 -47513687 - AluJb SINE Alu -14 298 85 1809 152 7 21 chr2 203174371 203174661 -47513193 + AluSx SINE Alu 1 286 -26 721 160 0 0 chr2 203174711 203174830 -47513024 + L1MC1 LINE L1 6197 6315 -18 27 73 0 0 chr2 203174833 203174888 -47512966 + AT_rich Low_complexity Low_complexity 1 55 0 28 86 0 0 chr2 203174964 203175034 -47512820 + AT_rich Low_complexity Low_complexity 1 70 0 22 0 0 0 chr2 203175117 203175139 -47512715 + AT_rich Low_complexity Low_complexity 1 22 0 1476 193 3 64 chr2 203175344 203175479 -47512375 + AluJo SINE Alu 1 143 -169 2239 106 0 0 chr2 203175479 203175771 -47512083 + AluSc SINE Alu 1 292 -17 1476 193 3 64 chr2 203175771 203175946 -47511908 + AluJo SINE Alu 143 292 -20 2155 98 0 36 chr2 203176848 203177154 -47510700 + AluSc SINE Alu 1 295 -14 339 290 86 31 chr2 203177486 203177648 -47510206 + L1M4 LINE L1 4023 4193 -1953 21 0 0 0 chr2 203178341 203178362 -47509492 + AT_rich Low_complexity Low_complexity 1 21 0 509 211 154 29 chr2 203178549 203178724 -47509130 + MER5C DNA MER1_type 1 197 -127 1729 113 4 4 chr2 203178759 203179040 -47508814 - AluSx SINE Alu 0 322 42 11196 183 8 9 chr2 203179176 203179429 -47508425 + L1PA15 LINE L1 2929 3181 -2984 2213 119 7 0 chr2 203179429 203179732 -47508122 + AluSx SINE Alu 1 305 -7 11196 183 8 9 chr2 203179732 203181110 -47506744 + L1PA15 LINE L1 3181 4559 -1606 2053 134 7 7 chr2 203181110 203181401 -47506453 + AluSx SINE Alu 6 296 -16 11196 183 8 9 chr2 203181401 203182153 -47505701 + L1PA15 LINE L1 4559 5310 -855 2268 117 0 3 chr2 203182153 203182462 -47505392 + AluSx SINE Alu 1 308 -4 11196 183 8 9 chr2 203182462 203183265 -47504589 + L1PA15 LINE L1 5310 6165 0 2498 80 0 3 chr2 203183707 203184008 -47503846 - AluSp SINE Alu -13 300 1 24 67 0 0 chr2 203184165 203184210 -47503644 + AT_rich Low_complexity Low_complexity 1 45 0 25 65 0 0 chr2 203185208 203185254 -47502600 + AT_rich Low_complexity Low_complexity 1 46 0 1768 119 166 25 chr2 203185749 203186068 -47501786 + THE1B LTR MaLR 1 364 0 376 242 74 13 chr2 203186135 203186284 -47501570 + MER103 DNA DNA 2 159 -7 535 330 108 0 chr2 203186732 203186935 -47500919 + MIR SINE MIR 26 250 -12 1864 92 72 11 chr2 203186944 203187206 -47500648 + AluSx SINE Alu 1 278 -34 202 28 28 28 chr2 203187209 203187245 -47500609 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 2198 68 18 0 chr2 203187410 203187712 -47500142 + AluSp SINE Alu 1 307 0 2337 102 0 6 chr2 203187845 203188160 -47499694 - AluSp SINE Alu 0 313 1 442 314 39 13 chr2 203188848 203189004 -47498850 + MIR3 SINE MIR 28 187 -21 2059 126 30 10 chr2 203189130 203189431 -47498423 - AluSx SINE Alu -5 307 1 2356 107 0 0 chr2 203189738 203190048 -47497806 - AluY SINE Alu 0 311 2 2157 111 3 36 chr2 203190418 203190725 -47497129 - AluSg SINE Alu -13 297 1 315 247 21 0 chr2 203190960 203191053 -47496801 + L1ME LINE L1 5730 5824 -297 4684 154 25 9 chr2 203191141 203192020 -47495834 + L1MB2 LINE L1 5272 6164 -7 272 48 63 48 chr2 203192020 203192083 -47495771 + CT-rich Low_complexity Low_complexity 4 67 0 2270 104 7 7 chr2 203192085 203192392 -47495462 - AluSx SINE Alu -5 307 1 23 33 0 0 chr2 203192436 203192466 -47495388 + AT_rich Low_complexity Low_complexity 1 30 0 1377 178 25 0 chr2 203192551 203192793 -47495061 + L1PB4 LINE L1 5905 6152 -4 2309 108 0 0 chr2 203193625 203193922 -47493932 - AluSx SINE Alu -15 297 1 189 359 123 19 chr2 203195109 203195215 -47492639 - L2 LINE L2 -19 3253 3137 284 325 102 83 chr2 203195524 203195608 -47492246 - L2 LINE L2 -577 2737 2656 2281 87 10 0 chr2 203195608 203195908 -47491946 + AluSg SINE Alu 1 303 -7 284 325 102 83 chr2 203195908 203196164 -47491690 - L2 LINE L2 -658 2656 2406 1922 116 4 0 chr2 203196164 203196423 -47491431 + AluSq SINE Alu 1 260 -53 284 325 102 83 chr2 203196423 203196779 -47491075 - L2 LINE L2 -908 2406 2027 209 289 0 0 chr2 203197534 203197586 -47490268 + L2 LINE L2 3258 3309 -4 2145 79 32 4 chr2 203197610 203197890 -47489964 + AluSc SINE Alu 1 288 -21 405 0 0 0 chr2 203198976 203199021 -47488833 + (CA)n Simple_repeat Simple_repeat 2 46 0 460 255 99 89 chr2 203199963 203200277 -47487577 + MLT1J LTR MaLR 101 417 -94 487 240 26 13 chr2 203200634 203200788 -47487066 + MLT1J LTR MaLR 1 156 -355 304 306 53 85 chr2 203200822 203200889 -47486965 + MLT1J LTR MaLR 135 203 -308 1441 194 62 10 chr2 203200889 203201178 -47486676 - AluJo SINE Alu -8 304 1 304 306 53 85 chr2 203201178 203201391 -47486463 + MLT1J LTR MaLR 203 406 -105 548 313 94 5 chr2 203201507 203201699 -47486155 - MIR SINE MIR -37 225 17 23 0 0 0 chr2 203202443 203202466 -47485388 + AT_rich Low_complexity Low_complexity 1 23 0 2340 75 0 10 chr2 203202577 203202870 -47484984 - AluY SINE Alu -21 290 1 24 0 0 0 chr2 203203311 203203335 -47484519 + AT_rich Low_complexity Low_complexity 1 24 0 1510 191 81 55 chr2 203203468 203203616 -47484238 + Charlie4a DNA MER1_type 26 169 -1792 1427 205 18 25 chr2 203203616 203203936 -47483918 + AluJb SINE Alu 1 318 0 1510 191 81 55 chr2 203203936 203204257 -47483597 + Charlie4a DNA MER1_type 169 508 0 1670 185 7 10 chr2 203204361 203204659 -47483195 + AluJb SINE Alu 5 301 -11 27 0 0 0 chr2 203205118 203205145 -47482709 + AT_rich Low_complexity Low_complexity 1 27 0 230 0 33 0 chr2 203205250 203205280 -47482574 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 417 317 94 6 chr2 203205413 203205593 -47482261 - MIR SINE MIR -29 233 38 1468 97 0 0 chr2 203205614 203205800 -47482054 - AluSx SINE Alu -15 295 110 485 101 0 0 chr2 203205800 203205869 -47481985 - AluSx SINE Alu -243 69 1 35 0 0 0 chr2 203205921 203205956 -47481898 + AT_rich Low_complexity Low_complexity 1 35 0 253 306 0 0 chr2 203205976 203206048 -47481806 - MIR3 SINE MIR -7 201 130 2536 66 3 0 chr2 203206107 203206409 -47481445 + AluSq SINE Alu 1 303 -10 1758 171 26 7 chr2 203206494 203206798 -47481056 - AluJb SINE Alu -2 310 1 566 337 23 15 chr2 203207174 203207435 -47480419 + L1MEc LINE L1 156 418 -5978 352 217 92 0 chr2 203207589 203207709 -47480145 + L1MEc LINE L1 2346 2476 -3739 2193 125 0 10 chr2 203208371 203208684 -47479170 + AluSx SINE Alu 1 310 -2 349 239 133 54 chr2 203208691 203208763 -47479091 + L1MEc LINE L1 2896 2961 -3254 1498 126 40 7 chr2 203208763 203209041 -47478813 - L1MA8 LINE L1 -4 6287 6001 349 239 133 54 chr2 203209041 203209336 -47478518 + L1MEc LINE L1 2961 3292 -2923 1155 136 0 0 chr2 203209339 203209493 -47478361 - FAM SINE Alu -20 165 12 732 270 3 33 chr2 203209494 203209798 -47478056 + L1MEc LINE L1 3285 3579 -2636 680 192 0 17 chr2 203209810 203209930 -47477924 + FLAM_A SINE Alu 15 132 -10 280 224 142 30 chr2 203209931 203210065 -47477789 + L1MEc LINE L1 3571 3719 -2496 363 150 0 0 chr2 203210065 203210125 -47477729 + MLT1A2 LTR MaLR 315 374 0 2034 189 52 34 chr2 203210129 203210722 -47477132 + MLT1B-int LTR MaLR 5 742 -629 264 286 0 0 chr2 203210837 203210907 -47476947 + MLT1B-int LTR MaLR 698 767 -968 1814 240 23 5 chr2 203211038 203211475 -47476379 + MLT1B-int LTR MaLR 1290 1734 -1 1290 214 97 14 chr2 203211476 203211836 -47476018 + MLT1B LTR MaLR 1 390 0 1486 155 17 55 chr2 203211956 203212079 -47475775 + AluJo SINE Alu 23 149 -163 2106 158 94 3 chr2 203212079 203212471 -47475383 + MSTA LTR MaLR 1 428 0 1486 155 17 55 chr2 203212471 203212637 -47475217 + AluJo SINE Alu 149 301 -11 189 0 0 0 chr2 203212637 203212658 -47475196 + (GA)n Simple_repeat Simple_repeat 2 22 0 626 215 123 42 chr2 203212700 203212961 -47474893 + L1MEc LINE L1 3880 4161 -2054 252 156 52 97 chr2 203212954 203213038 -47474816 + L1MEc LINE L1 4365 4440 -1775 * 1521 199 14 40 chr2 203213038 203213334 -47474520 + AluJo SINE Alu 1 288 -24 252 156 52 97 chr2 203213334 203213403 -47474451 + L1MEc LINE L1 4440 4511 -1704 2175 136 0 0 chr2 203213968 203214277 -47473577 + AluSq SINE Alu 1 309 -4 3807 115 53 33 chr2 203215874 203216658 -47471196 + SVA Other Other 432 1123 -263 2525 55 0 0 chr2 203217230 203217523 -47470331 - AluY SINE Alu -14 297 5 1738 201 0 3 chr2 203217723 203218022 -47469832 - AluJo SINE Alu -14 298 1 1783 251 63 56 chr2 203218033 203218645 -47469209 - L1MC4 LINE L1 -163 7879 7257 2153 106 3 0 chr2 203218645 203218951 -47468903 + AluSx SINE Alu 1 307 0 1783 251 63 56 chr2 203218951 203219247 -47468607 - L1MC4 LINE L1 -785 7257 6964 358 188 14 13 chr2 203219399 203219548 -47468306 + CT-rich Low_complexity Low_complexity 1 149 0 1258 183 119 0 chr2 203219569 203219804 -47468050 - AluJo SINE Alu -49 263 1 207 314 35 35 chr2 203220260 203220346 -47467508 + MIR SINE MIR 168 253 -9 22 35 0 0 chr2 203220408 203220437 -47467417 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 203222403 203222431 -47465423 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 203222489 203222517 -47465337 + AT_rich Low_complexity Low_complexity 1 28 0 205 178 0 22 chr2 203222967 203223012 -47464842 + GA-rich Low_complexity Low_complexity 3 46 0 551 208 25 8 chr2 203223162 203223282 -47464572 - AluJo SINE Alu -79 233 112 566 300 76 49 chr2 203223332 203223702 -47464152 + MLT1I LTR MaLR 26 405 -4 225 163 61 0 chr2 203223702 203223751 -47464103 - L1MA8 LINE L1 -254 6037 5986 803 232 222 11 chr2 203224123 203224613 -47463241 + LTR50 LTR ERVL 1 684 -111 834 165 8 0 chr2 203224666 203224793 -47463061 + FLAM_C SINE Alu 1 128 -5 2076 108 39 26 chr2 203224867 203225172 -47462682 + AluSc SINE Alu 1 309 0 22 56 0 0 chr2 203225957 203225993 -47461861 + AT_rich Low_complexity Low_complexity 1 36 0 2355 96 0 6 chr2 203226128 203226441 -47461413 + AluSp SINE Alu 1 311 -2 364 254 29 29 chr2 203226808 203226946 -47460908 - L1ME4a LINE L1 -28 6093 5956 1762 164 0 14 chr2 203227380 203227672 -47460182 - AluJo SINE Alu -20 292 5 264 261 104 35 chr2 203227768 203227883 -47459971 + L1ME LINE L1 2 124 -5946 1209 161 22 123 chr2 203228423 203228555 -47459299 + AluJo SINE Alu 1 84 -218 2366 94 0 0 chr2 203228555 203228853 -47459001 - AluSx SINE Alu -14 298 1 1209 161 22 123 chr2 203228853 203229036 -47458818 + AluJo SINE Alu 84 284 -18 3326 168 33 50 chr2 203229045 203229180 -47458674 + L1MC2 LINE L1 5106 5242 -1102 1469 154 47 91 chr2 203229180 203229478 -47458376 + AluJo SINE Alu 2 286 -26 3326 168 33 50 chr2 203229478 203230111 -47457743 + L1MC2 LINE L1 5242 5839 -505 1632 180 33 0 chr2 203230111 203230239 -47457615 + AluJb SINE Alu 1 123 -179 342 0 0 0 chr2 203230239 203230277 -47457577 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1632 180 33 0 chr2 203230277 203230441 -47457413 + AluJb SINE Alu 123 302 0 3326 168 33 50 chr2 203230441 203230577 -47457277 + L1MC2 LINE L1 5839 5976 -368 1265 154 71 104 chr2 203230734 203231129 -47456725 + L1MC2 LINE L1 5961 6342 -2 2045 121 7 10 chr2 203231438 203231735 -47456119 - AluSx SINE Alu -16 296 1 27 29 0 0 chr2 203231951 203231985 -47455869 + AT_rich Low_complexity Low_complexity 1 34 0 199 368 123 9 chr2 203232210 203232324 -47455530 + MER5A DNA MER1_type 61 187 -2 21 0 0 0 chr2 203232528 203232549 -47455305 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 203232673 203232702 -47455152 + AT_rich Low_complexity Low_complexity 1 29 0 1607 112 8 4 chr2 203232756 203232997 -47454857 - L1PA7 LINE L1 0 6154 5913 1013 87 14 7 chr2 203233640 203233778 -47454076 + AluSg SINE Alu 1 139 -171 1107 76 0 0 chr2 203233852 203233983 -47453871 + AluSg/x SINE Alu 164 294 -18 2089 91 0 0 chr2 203234595 203234859 -47452995 - AluSc SINE Alu -10 299 36 1338 158 18 14 chr2 203235042 203235264 -47452590 + AluJo SINE Alu 90 312 0 21 89 0 0 chr2 203235588 203235644 -47452210 + AT_rich Low_complexity Low_complexity 1 56 0 1572 84 9 5 chr2 203235740 203235953 -47451901 - AluSp SINE Alu -13 300 87 1085 94 13 0 chr2 203235954 203236103 -47451751 - AluSp SINE Alu -162 151 1 1305 213 6 49 chr2 203236147 203236471 -47451383 + MLT1A1 LTR MaLR 1 310 -55 2157 77 0 14 chr2 203236477 203236787 -47451067 + AluY SINE Alu 1 306 0 787 175 0 0 chr2 203236837 203236963 -47450891 - FLAM_C SINE Alu -7 126 1 21 0 0 0 chr2 203237882 203237903 -47449951 + AT_rich Low_complexity Low_complexity 1 21 0 475 292 87 67 chr2 203238853 203239151 -47448703 + L2 LINE L2 2573 2876 -438 1696 157 45 11 chr2 203239250 203239537 -47448317 - AluJb SINE Alu -13 299 3 1156 214 139 124 chr2 203239913 203240111 -47447743 + MER21B LTR ERV1 14 208 -655 2268 109 10 3 chr2 203240111 203240415 -47447439 + AluSc SINE Alu 1 306 -3 1156 214 139 124 chr2 203240415 203240941 -47446913 + MER21B LTR ERV1 208 749 -114 757 276 48 14 chr2 203241394 203241642 -47446212 + L2 LINE L2 2738 3009 -304 360 120 0 0 chr2 203242193 203242243 -47445611 + AluSp/q SINE Alu 213 262 -41 596 303 77 21 chr2 203242930 203243217 -47444637 + L2 LINE L2 3010 3312 -1 1896 130 37 0 chr2 203243306 203243576 -47444278 + AluSx SINE Alu 3 282 -30 288 53 0 0 chr2 203243576 203243614 -47444240 + (CAGGA)n Simple_repeat Simple_repeat 3 40 0 889 113 11 38 chr2 203243616 203243801 -47444053 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 206 77 0 0 chr2 203243801 203243827 -47444027 + (GGAAA)n Simple_repeat Simple_repeat 5 30 0 265 62 42 0 chr2 203243827 203243875 -47443979 + (CAAGA)n Simple_repeat Simple_repeat 2 51 0 436 221 8 0 chr2 203243889 203244016 -47443838 + L1ME1 LINE L1 5069 5196 -950 1435 189 0 8 chr2 203244018 203244266 -47443588 + AluJo SINE Alu 1 246 -66 2286 235 120 8 chr2 203244356 203244996 -47442858 + L1ME1 LINE L1 5188 5951 -215 1487 161 75 19 chr2 203244996 203245310 -47442544 - AluJo SINE Alu 0 329 1 2286 235 120 8 chr2 203245310 203245522 -47442332 + L1ME1 LINE L1 5951 6138 -28 328 238 56 56 chr2 203245398 203245558 -47442296 + L1MA10 LINE L1 6175 6334 0 * 198 103 0 0 chr2 203246002 203246031 -47441823 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 461 309 58 11 chr2 203246386 203246577 -47441277 - MIR SINE MIR -61 201 2 715 256 126 10 chr2 203246907 203247114 -47440740 + MIR SINE MIR 21 251 -11 787 211 74 0 chr2 203247251 203247441 -47440413 + MIR SINE MIR 54 257 -5 275 204 0 0 chr2 203247754 203247803 -47440051 - Charlie5 DNA MER1_type -2403 209 161 2267 98 17 0 chr2 203248244 203248540 -47439314 + AluSp SINE Alu 1 301 -12 2236 111 0 3 chr2 203248541 203248838 -47439016 + AluSc SINE Alu 1 296 -13 2469 46 0 0 chr2 203249698 203250020 -47437834 + AluY SINE Alu 1 322 0 2262 110 7 0 chr2 203250037 203250337 -47437517 + AluSx SINE Alu 5 306 -6 1957 62 0 12 chr2 203250379 203250622 -47437232 - AluY SINE Alu -71 240 1 1672 248 71 31 chr2 203250646 203251167 -47436687 - MLT1F LTR MaLR 0 542 1 1791 248 129 8 chr2 203251350 203251999 -47435855 + HsTC2c DNA MER2_type 2 729 0 1240 187 64 9 chr2 203252032 203252251 -47435603 - AluJb SINE Alu -79 233 3 201 116 0 47 chr2 203252501 203252544 -47435310 + (TTA)n Simple_repeat Simple_repeat 2 42 0 318 194 97 40 chr2 203252982 203253106 -47434748 + L1MC5 LINE L1 6947 7077 -884 674 251 118 37 chr2 203253240 203253814 -47434040 + L1MC5 LINE L1 7311 7931 -30 284 284 45 11 chr2 203253958 203254046 -47433808 - MIR SINE MIR -63 145 55 21 36 0 0 chr2 203254677 203254705 -47433149 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 203254834 203254855 -47432999 + AT_rich Low_complexity Low_complexity 1 21 0 411 263 30 23 chr2 203255461 203255594 -47432260 + MIR SINE MIR 116 249 -13 23 0 0 0 chr2 203255705 203255728 -47432126 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr2 203255954 203255994 -47431860 + AT_rich Low_complexity Low_complexity 1 40 0 2189 74 0 11 chr2 203256679 203256963 -47430891 + AluSx SINE Alu 1 281 -31 345 222 46 19 chr2 203258244 203258352 -47429502 - L1MC5 LINE L1 -48 7913 7803 1673 171 27 0 chr2 203258389 203258681 -47429173 + AluJo SINE Alu 6 305 -7 723 115 70 51 chr2 203258740 203258897 -47428957 + MER58 DNA MER1_type 106 265 -76 1220 271 101 82 chr2 203258942 203259237 -47428617 + L2 LINE L2 2297 2585 -728 714 142 8 30 chr2 203259237 203259371 -47428483 - FLAM_C SINE Alu -2 131 1 1220 271 101 82 chr2 203259371 203259782 -47428072 + L2 LINE L2 2585 2987 -326 2497 82 0 0 chr2 203259782 203260085 -47427769 - AluSx SINE Alu -7 305 3 1220 271 101 82 chr2 203260085 203260118 -47427736 + L2 LINE L2 2987 3018 -295 1588 188 19 19 chr2 203260118 203260427 -47427427 + AluJo SINE Alu 1 309 -3 1220 271 101 82 chr2 203260427 203260674 -47427180 + L2 LINE L2 3018 3312 -1 426 273 193 0 chr2 203260856 203261006 -47426848 - MER5A DNA MER1_type -3 186 8 2194 125 3 3 chr2 203262375 203262687 -47425167 + AluSx SINE Alu 1 312 0 5405 173 56 47 chr2 203263065 203263364 -47424490 - L1MCa LINE L1 -2919 3507 3212 8064 75 7 9 chr2 203263364 203264438 -47423416 - MER11C LTR ERVK 0 1071 1 5405 173 56 47 chr2 203264438 203264487 -47423367 - L1MCa LINE L1 -3214 3212 3165 2182 123 0 3 chr2 203264487 203264787 -47423067 + AluSx SINE Alu 1 299 -13 2084 123 14 0 chr2 203264787 203265079 -47422775 + AluSg SINE Alu 1 296 -14 5405 173 56 47 chr2 203265079 203265217 -47422637 - L1MCa LINE L1 -3261 3165 3030 2145 105 7 13 chr2 203265217 203265521 -47422333 + AluSq SINE Alu 1 302 -11 5405 173 56 47 chr2 203265521 203266212 -47421642 - L1MCa LINE L1 -3396 3030 2346 1876 169 13 10 chr2 203266212 203266514 -47421340 - AluJo SINE Alu -9 303 1 5405 173 56 47 chr2 203266514 203266585 -47421269 - L1MCa LINE L1 -4080 2346 2277 2392 81 10 0 chr2 203266585 203266880 -47420974 - AluSq SINE Alu -15 298 1 5405 173 56 47 chr2 203266880 203268202 -47419652 - L1MCa LINE L1 -4149 2277 821 2029 96 40 36 chr2 203268202 203268503 -47419351 - AluSx SINE Alu -10 302 1 5405 173 56 47 chr2 203268503 203268844 -47419010 - L1MCa LINE L1 -5605 821 484 974 187 4 100 chr2 203268844 203269085 -47418769 + AluJo SINE Alu 1 218 -94 398 264 174 17 chr2 203269265 203269443 -47418411 + MIR SINE MIR 2 207 -55 2245 104 3 0 chr2 203269977 203270266 -47417588 + AluSg SINE Alu 1 290 -20 2165 125 0 0 chr2 203270652 203270949 -47416905 + AluSx SINE Alu 1 297 -15 22 94 0 0 chr2 203271052 203271116 -47416738 + AT_rich Low_complexity Low_complexity 1 64 0 2221 83 21 0 chr2 203271460 203271748 -47416106 + AluY SINE Alu 1 294 -17 1496 179 39 14 chr2 203271859 203272138 -47415716 + AluJo SINE Alu 1 286 -26 585 188 23 23 chr2 203272206 203272334 -47415520 - FRAM SINE Alu -1 175 48 1349 195 0 0 chr2 203272368 203272589 -47415265 - AluJo SINE Alu -91 221 1 2124 115 58 0 chr2 203273510 203273805 -47414049 - AluSx SINE Alu 0 312 1 2131 116 0 0 chr2 203274046 203274330 -47413524 + AluSx SINE Alu 1 284 -28 1926 133 0 36 chr2 203274356 203274657 -47413197 + AluSx SINE Alu 1 290 -22 2100 121 7 3 chr2 203274757 203275054 -47412800 + AluSx SINE Alu 1 298 -14 24 53 0 0 chr2 203275195 203275233 -47412621 + AT_rich Low_complexity Low_complexity 1 38 0 351 247 193 36 chr2 203275405 203275571 -47412283 - MLT1J LTR MaLR -49 462 271 1377 199 9 60 chr2 203276405 203276721 -47411133 - AluJb SINE Alu -12 300 1 27 0 0 0 chr2 203276961 203276988 -47410866 + AT_rich Low_complexity Low_complexity 1 27 0 1609 185 27 3 chr2 203277133 203277431 -47410423 - AluJo SINE Alu -7 305 1 1180 179 14 18 chr2 203277756 203277979 -47409875 - AluJo SINE Alu -90 222 1 196 270 151 48 chr2 203278144 203278270 -47409584 - MIR SINE MIR -78 184 46 2376 96 3 0 chr2 203278399 203278700 -47409154 + AluSp SINE Alu 1 302 -11 1873 138 11 0 chr2 203279930 203280199 -47407655 - AluSx SINE Alu -36 276 5 320 361 125 5 chr2 203280779 203280987 -47406867 - L2 LINE L2 -1 3271 3039 2441 28 0 3 chr2 203281260 203281564 -47406290 + AluY SINE Alu 1 303 0 225 214 0 0 chr2 203283717 203283759 -47404095 - L3 LINE CR1 -13 1564 1523 27 29 0 0 chr2 203283806 203283840 -47404014 + AT_rich Low_complexity Low_complexity 1 34 0 229 114 0 0 chr2 203284438 203284482 -47403372 - L1ME4a LINE L1 -112 6009 5966 21 0 0 0 chr2 203284580 203284601 -47403253 + AT_rich Low_complexity Low_complexity 1 21 0 2249 43 14 0 chr2 203284686 203285000 -47402854 - AluY SINE Alu 0 318 1 325 304 64 36 chr2 203285079 203285106 -47402748 - L1ME4a LINE L1 -325 5845 5820 2246 98 0 3 chr2 203285106 203285393 -47402461 - AluSx SINE Alu -26 286 1 325 304 64 36 chr2 203285393 203285508 -47402346 - L1ME4a LINE L1 -350 5820 5694 302 231 231 11 chr2 203285510 203285601 -47402253 - L2 LINE L2 -3 3310 3200 996 205 23 0 chr2 203285601 203285816 -47402038 - L1ME4a LINE L1 -516 5648 5429 559 217 0 0 chr2 203285932 203286052 -47401802 - L1MB5 LINE L1 -38 6136 6017 1389 230 93 43 chr2 203286069 203286481 -47401373 - L1MB5 LINE L1 -351 5815 5425 1996 153 35 12 chr2 203286481 203286821 -47401033 + MER7A DNA MER2_type 1 346 0 1389 230 93 43 chr2 203286821 203287126 -47400728 - L1MB5 LINE L1 -741 5425 5137 2101 112 0 3 chr2 203287126 203287413 -47400441 - AluSg SINE Alu -24 286 1 1389 230 93 43 chr2 203287413 203287589 -47400265 - L1MB5 LINE L1 -1029 5137 4872 2026 127 149 3 chr2 203287589 203287959 -47399895 - MSTB1 LTR MaLR -4 428 5 1389 230 93 43 chr2 203287959 203288020 -47399834 - L1MB5 LINE L1 -1294 4872 4815 648 233 20 68 chr2 203287989 203288152 -47399702 - L1MB5 LINE L1 -1630 4516 4347 * 800 158 8 8 chr2 203288152 203288285 -47399569 + FLAM_C SINE Alu 1 133 0 648 233 20 68 chr2 203288285 203288580 -47399274 - L1MB5 LINE L1 -1799 4347 4015 2192 131 0 0 chr2 203288580 203288892 -47398962 - AluSx SINE Alu 0 312 1 2154 99 7 7 chr2 203288902 203289196 -47398658 - AluSx SINE Alu -18 294 1 867 165 0 0 chr2 203289221 203289354 -47398500 - FLAM_C SINE Alu 0 133 1 5405 144 61 41 chr2 203289354 203289695 -47398159 + L1MCa LINE L1 484 817 -5609 1966 101 47 27 chr2 203289695 203289991 -47397863 + AluSx SINE Alu 1 302 -10 5405 144 61 41 chr2 203289991 203291313 -47396541 + L1MCa LINE L1 817 2260 -4166 2409 96 0 10 chr2 203291313 203291625 -47396229 + AluSx SINE Alu 1 309 -3 312 301 150 0 chr2 203291625 203291758 -47396096 - L2 LINE L2 -2430 884 732 233 296 74 0 chr2 203291771 203291852 -47396002 - MIR SINE MIR -74 188 102 2335 101 7 3 chr2 203291860 203292167 -47395687 + AluSx SINE Alu 5 312 0 1805 181 0 0 chr2 203292297 203292596 -47395258 - AluJb SINE Alu -13 299 1 414 0 0 0 chr2 203292955 203293001 -47394853 + (TA)n Simple_repeat Simple_repeat 1 46 0 1129 227 80 13 chr2 203293007 203293320 -47394534 - MER2 DNA MER2_type -8 337 4 262 333 12 22 chr2 203293321 203293419 -47394435 + MER5A DNA MER1_type 70 167 -11 1425 136 123 79 chr2 203293439 203293755 -47394099 - MER1B DNA MER1_type 0 339 10 23 54 0 0 chr2 203293855 203293892 -47393962 + AT_rich Low_complexity Low_complexity 1 37 0 1458 176 64 20 chr2 203295215 203295511 -47392343 - AluJb SINE Alu -3 309 1 189 121 0 0 chr2 203296330 203296363 -47391491 + (TATG)n Simple_repeat Simple_repeat 2 34 0 21 71 0 0 chr2 203296962 203297004 -47390850 + AT_rich Low_complexity Low_complexity 1 42 0 2334 104 0 0 chr2 203297112 203297409 -47390445 + AluSq SINE Alu 1 297 -16 27 29 0 0 chr2 203297490 203297524 -47390330 + AT_rich Low_complexity Low_complexity 1 34 0 30 27 0 0 chr2 203297730 203297767 -47390087 + AT_rich Low_complexity Low_complexity 1 37 0 360 0 0 0 chr2 203299207 203299247 -47388607 + (TA)n Simple_repeat Simple_repeat 1 40 0 2909 208 63 27 chr2 203300148 203300961 -47386893 - L1ME1 LINE L1 -5 6161 5320 1979 134 31 0 chr2 203300962 203301252 -47386602 - AluJb SINE Alu -13 299 1 221 167 0 0 chr2 203301260 203301302 -47386552 + T-rich Low_complexity Low_complexity 1 42 0 2306 115 0 3 chr2 203301342 203301656 -47386198 - AluSq SINE Alu 0 313 1 917 66 36 51 chr2 203301656 203301793 -47386061 - AluSq/x SINE Alu -178 135 1 1172 232 68 91 chr2 203301795 203302312 -47385542 - MER21B LTR ERV1 -263 600 96 203 207 310 17 chr2 203302882 203302999 -47384855 - MIR SINE MIR -22 186 29 2459 83 0 0 chr2 203303461 203303762 -47384092 + AluSx SINE Alu 1 301 -11 2394 53 0 50 chr2 203304986 203305304 -47382550 + AluY SINE Alu 1 302 -9 1215 92 0 0 chr2 203305354 203305518 -47382336 + AluSg/x SINE Alu 133 296 -13 920 214 129 8 chr2 203305701 203305803 -47382051 - AluSx SINE Alu -34 278 190 2199 105 3 22 chr2 203305803 203306118 -47381736 - AluSx SINE Alu -3 309 1 920 214 129 8 chr2 203306118 203306263 -47381591 - AluSx SINE Alu -122 190 1 413 330 92 0 chr2 203306273 203306458 -47381396 - MIR SINE MIR -46 216 15 2091 114 4 0 chr2 203306528 203306808 -47381046 - AluSx SINE Alu -31 281 1 589 175 50 8 chr2 203306816 203306936 -47380918 - FLAM_C SINE Alu -10 133 9 1458 160 101 3 chr2 203307087 203307419 -47380435 - MER66A LTR ERV1 -3 483 27 278 139 23 0 chr2 203307794 203307837 -47380017 + AluJb SINE Alu 2 45 -256 2277 116 36 28 chr2 203307837 203308198 -47379656 - THE1B LTR MaLR 0 364 1 1622 158 8 0 chr2 203308199 203308458 -47379396 + AluJb SINE Alu 41 301 -11 1611 179 52 7 chr2 203308972 203309263 -47378591 - AluJb SINE Alu -4 308 5 2233 118 0 3 chr2 203309374 203309671 -47378183 + AluSx SINE Alu 1 296 -16 826 148 21 0 chr2 203309672 203309814 -47378040 - L1MB3 LINE L1 -53 6130 5986 1548 164 51 27 chr2 203310134 203310426 -47377428 - AluJo SINE Alu -13 299 1 4052 120 42 9 chr2 203310427 203311061 -47376793 - L1PA16 LINE L1 -11 6155 5498 2232 78 10 26 chr2 203311061 203311369 -47376485 - AluSc SINE Alu -6 303 1 4052 120 42 9 chr2 203311369 203311385 -47376469 - L1PA16 LINE L1 -668 5498 5484 403 165 0 8 chr2 203311577 203311807 -47376047 + AluJo SINE Alu 1 301 -11 2310 80 6 16 chr2 203312183 203312494 -47375360 + AluSx SINE Alu 1 308 -4 2003 100 3 45 chr2 203312816 203313134 -47374720 - AluSc SINE Alu 0 306 1 315 71 0 0 chr2 203313408 203313450 -47374404 + (TG)n Simple_repeat Simple_repeat 1 42 0 1001 195 56 0 chr2 203313916 203314111 -47373743 - MER3 DNA MER1_type -3 206 1 1602 193 3 7 chr2 203314257 203314547 -47373307 - AluJo SINE Alu -23 289 1 1587 218 77 31 chr2 203314712 203314831 -47373023 + L1MCa LINE L1 47 159 -6267 189 0 0 0 chr2 203314831 203314852 -47373002 + (GA)n Simple_repeat Simple_repeat 1 21 0 1587 218 77 31 chr2 203314852 203315150 -47372704 + L1MCa LINE L1 159 483 -5943 2067 93 19 13 chr2 203315150 203315460 -47372394 + AluYb8 SINE Alu 1 312 -6 1955 107 27 0 chr2 203315636 203315934 -47371920 - AluSx SINE Alu -6 306 1 593 178 144 0 chr2 203316407 203316525 -47371329 + MER6 DNA MER2_type 1 135 -730 2236 98 23 3 chr2 203317175 203317482 -47370372 - AluSq SINE Alu 0 313 1 1878 159 17 0 chr2 203317903 203318198 -47369656 + AluJb SINE Alu 1 300 -12 844 256 46 0 chr2 203318202 203318440 -47369414 + L1MA9 LINE L1 6026 6274 -38 612 233 80 12 chr2 203318538 203318701 -47369153 - MIR SINE MIR 0 262 89 663 271 60 23 chr2 203320910 203321128 -47366726 + MIR SINE MIR 16 241 -21 2316 89 3 0 chr2 203321289 203321581 -47366273 + AluSg SINE Alu 1 293 -17 1823 136 0 71 chr2 203321930 203322254 -47365600 - AluSx SINE Alu -11 301 1 2427 83 0 0 chr2 203322440 203322742 -47365112 - AluSc SINE Alu -7 302 1 203 240 0 0 chr2 203322812 203322860 -47364994 - MIR SINE MIR -54 208 161 336 163 407 15 chr2 203322860 203322995 -47364859 + MER5A DNA MER1_type 2 189 0 251 284 122 0 chr2 203323041 203323115 -47364739 - MIR SINE MIR -79 129 47 22 0 0 0 chr2 203323218 203323240 -47364614 + AT_rich Low_complexity Low_complexity 1 22 0 1484 162 4 4 chr2 203323774 203324015 -47363839 + AluJb SINE Alu 49 289 -23 662 236 57 0 chr2 203324624 203324781 -47363073 - MIR SINE MIR 0 262 97 22 0 0 0 chr2 203324827 203324849 -47363005 + AT_rich Low_complexity Low_complexity 1 22 0 2186 115 0 13 chr2 203325048 203325360 -47362494 - AluSx SINE Alu -2 310 3 978 80 0 7 chr2 203325417 203325554 -47362300 - MER85 DNA T2_type -3 136 1 217 243 200 0 chr2 203326118 203326188 -47361666 + L2 LINE L2 3187 3270 -2 878 207 17 11 chr2 203326341 203326515 -47361339 - FAM SINE Alu 0 175 1 23 0 0 0 chr2 203326518 203326541 -47361313 + AT_rich Low_complexity Low_complexity 1 23 0 214 220 11 11 chr2 203327551 203327642 -47360212 + (TA)n Simple_repeat Simple_repeat 1 91 0 749 288 42 19 chr2 203327707 203328020 -47359834 - L1MC4a LINE L1 -1981 5827 5508 2041 100 25 4 chr2 203328752 203329032 -47358822 + AluSx SINE Alu 13 298 -14 374 273 11 0 chr2 203329100 203329188 -47358666 + L2 LINE L2 3222 3310 -3 305 327 82 0 chr2 203330247 203330357 -47357497 + L2 LINE L2 3148 3266 -6 1380 92 46 84 chr2 203331017 203331256 -47356598 - MER30 DNA MER1_type 0 230 1 2200 99 0 23 chr2 203331548 203331852 -47356002 + AluSx SINE Alu 1 297 -15 26 64 0 0 chr2 203332930 203332977 -47354877 + AT_rich Low_complexity Low_complexity 1 47 0 1986 128 16 7 chr2 203333404 203333710 -47354144 - AluSx SINE Alu -1 311 3 26 0 0 0 chr2 203333746 203333772 -47354082 + AT_rich Low_complexity Low_complexity 1 26 0 282 217 102 45 chr2 203333811 203333865 -47353989 - L1ME4a LINE L1 -1 6120 6071 2363 86 7 7 chr2 203333865 203334168 -47353686 + AluSp SINE Alu 1 303 -10 282 217 102 45 chr2 203334168 203334270 -47353584 - L1ME4a LINE L1 -50 6071 5955 300 121 0 61 chr2 203334361 203334427 -47353427 - L1ME4a LINE L1 0 6121 6060 248 291 44 25 chr2 203334440 203334598 -47353256 + L1ME LINE L1 5515 5675 -446 846 157 0 7 chr2 203334601 203334837 -47353017 + AluSx SINE Alu 1 294 -18 25 0 0 0 chr2 203334837 203334862 -47352992 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 203335188 203335211 -47352643 + AT_rich Low_complexity Low_complexity 1 23 0 2104 137 0 7 chr2 203335222 203335529 -47352325 - AluSx SINE Alu -7 305 1 315 248 152 9 chr2 203335694 203335799 -47352055 + Charlie8 DNA MER1_type 38 157 -2260 544 173 49 99 chr2 203335886 203336005 -47351849 + MER5B DNA MER1_type 1 111 -67 2131 125 0 0 chr2 203336005 203336302 -47351552 - AluSx SINE Alu -15 297 1 544 173 49 99 chr2 203336302 203336344 -47351510 + MER5B DNA MER1_type 111 154 -24 669 165 5 58 chr2 203336864 203337052 -47350802 + AluSp SINE Alu 129 306 -7 23 0 0 0 chr2 203337199 203337222 -47350632 + AT_rich Low_complexity Low_complexity 1 23 0 2046 99 17 3 chr2 203337262 203337555 -47350299 - AluSc SINE Alu -3 306 10 1641 155 7 38 chr2 203337561 203337710 -47350144 - AluSg SINE Alu -28 282 145 2206 121 3 0 chr2 203337710 203338016 -47349838 - AluSc SINE Alu -2 307 1 1641 155 7 38 chr2 203338016 203338156 -47349698 - AluSg SINE Alu -165 145 2 306 164 6 54 chr2 203338412 203338524 -47349330 - AluSc SINE Alu -25 274 211 313 327 83 19 chr2 203339898 203340164 -47347690 + L1MEd LINE L1 537 819 -5300 21 36 0 0 chr2 203340958 203340986 -47346868 + AT_rich Low_complexity Low_complexity 1 28 0 308 248 257 0 chr2 203341321 203341422 -47346432 - MIR SINE MIR -122 140 14 23 0 0 0 chr2 203342860 203342883 -47344971 + AT_rich Low_complexity Low_complexity 1 23 0 1994 148 0 0 chr2 203343098 203343415 -47344439 + AluSx SINE Alu 1 317 0 1956 170 0 3 chr2 203343442 203343754 -47344100 + AluJo SINE Alu 1 311 -1 231 279 73 15 chr2 203343756 203343960 -47343894 + L1MEd LINE L1 954 1169 -4950 371 203 0 14 chr2 203343960 203344034 -47343820 - Tigger5 DNA MER2_type -1 2322 2250 386 188 0 71 chr2 203344048 203344133 -47343721 + Tigger5 DNA MER2_type 2242 2320 -3 280 191 127 73 chr2 203344209 203344319 -47343535 + L1MEd LINE L1 1152 1267 -4862 308 296 37 68 chr2 203344434 203344552 -47343302 + HAL1 LINE L1 1451 1564 -943 825 154 8 0 chr2 203344552 203344682 -47343172 + FLAM_C SINE Alu 1 131 -2 308 296 37 68 chr2 203344682 203344725 -47343129 + HAL1 LINE L1 1564 1607 -900 1722 159 3 66 chr2 203344862 203345195 -47342659 + AluSx SINE Alu 1 312 0 1259 84 22 88 chr2 203345247 203345474 -47342380 + L1MA2 LINE L1 6073 6284 -20 2140 139 0 13 chr2 203345507 203345824 -47342030 + AluSq SINE Alu 1 313 0 386 155 18 0 chr2 203346213 203346293 -47341561 + L1MEd LINE L1 2921 3003 -3126 * 2101 196 48 19 chr2 203346285 203346804 -47341050 + L1M4 LINE L1 4799 5332 -814 865 116 0 36 chr2 203346860 203346998 -47340856 + L1MB5 LINE L1 5865 5997 -177 2357 84 0 0 chr2 203347191 203347489 -47340365 + AluSx SINE Alu 1 298 -14 30 59 0 0 chr2 203347489 203347540 -47340314 + AT_rich Low_complexity Low_complexity 1 51 0 2072 125 7 7 chr2 203348167 203348471 -47339383 - AluSq SINE Alu -9 304 1 387 0 0 0 chr2 203348685 203348728 -47339126 + (CA)n Simple_repeat Simple_repeat 2 44 0 2347 87 0 0 chr2 203348745 203349043 -47338811 - AluSg SINE Alu -12 298 1 37 69 0 0 chr2 203349452 203349524 -47338330 + AT_rich Low_complexity Low_complexity 1 72 0 5606 125 27 32 chr2 203350239 203351230 -47336624 - L1PA14 LINE L1 -2 6331 5352 6705 74 19 1 chr2 203351230 203352755 -47335099 + L1PA8 LINE L1 4625 6172 0 5606 125 27 32 chr2 203352755 203352790 -47335064 - L1PA14 LINE L1 -981 5352 5318 371 208 88 147 chr2 203352895 203352981 -47334873 + L1MC5 LINE L1 7609 7698 -263 1363 205 3 46 chr2 203352981 203353284 -47334570 + AluJo SINE Alu 1 290 -22 371 208 88 147 chr2 203353284 203353386 -47334468 + L1MC5 LINE L1 7698 7804 -157 1507 177 66 4 chr2 203353386 203353657 -47334197 + AluJo SINE Alu 1 288 -24 371 208 88 147 chr2 203353657 203353808 -47334046 + L1MC5 LINE L1 7804 7929 -32 305 155 46 17 chr2 203353843 203354017 -47333837 + (TA)n Simple_repeat Simple_repeat 1 179 0 1913 151 7 3 chr2 203354024 203354315 -47333539 - AluSx SINE Alu -20 292 1 1683 197 10 3 chr2 203354356 203354665 -47333189 + AluJb SINE Alu 1 311 -1 264 244 12 12 chr2 203354863 203354945 -47332909 + L1M4 LINE L1 2936 3017 -3129 1329 123 81 0 chr2 203354947 203355158 -47332696 - MER30 DNA MER1_type -1 229 2 296 48 24 0 chr2 203355222 203355264 -47332590 + (GAAAA)n Simple_repeat Simple_repeat 4 46 0 331 96 315 0 chr2 203355271 203355344 -47332510 + L1MA8 LINE L1 6014 6109 -182 9243 167 110 7 chr2 203355349 203356436 -47331418 + L1MA5 LINE L1 5 979 -6189 243 0 0 0 chr2 203356436 203356463 -47331391 + (CTG)n Simple_repeat Simple_repeat 3 29 0 9243 167 110 7 chr2 203356463 203356828 -47331026 + L1MA5 LINE L1 979 1305 -5863 2267 134 86 0 chr2 203356828 203357222 -47330632 + MSTA LTR MaLR 1 428 0 9243 167 110 7 chr2 203357222 203357610 -47330244 + L1MA5 LINE L1 1305 2035 -5133 2095 164 11 52 chr2 203357610 203357839 -47330015 - Tigger2a DNA MER2_type -2274 434 230 2227 104 10 0 chr2 203357839 203358147 -47329707 + AluSp SINE Alu 1 311 -2 2095 164 11 52 chr2 203358147 203358362 -47329492 - Tigger2a DNA MER2_type -2478 230 8 1347 179 40 32 chr2 203358370 203358745 -47329109 + L1MA5 LINE L1 2060 2437 -4731 1871 150 4 0 chr2 203358764 203359065 -47328789 + AluSx SINE Alu 1 302 0 4457 129 53 50 chr2 203359074 203359219 -47328635 + L1MA5 LINE L1 5489 5632 -1689 732 225 0 0 chr2 203359219 203359348 -47328506 + FLAM_A SINE Alu 1 129 -4 4457 129 53 50 chr2 203359348 203360081 -47327773 + L1MA5 LINE L1 5632 6362 -959 1539 157 81 4 chr2 203360081 203360342 -47327512 + AluJb SINE Alu 1 281 -31 4457 129 53 50 chr2 203360342 203361032 -47326822 + L1MA5 LINE L1 6362 7067 -254 1533 151 86 29 chr2 203361032 203361310 -47326544 + AluJb SINE Alu 5 298 -14 4457 129 53 50 chr2 203361310 203361392 -47326462 + L1MA5 LINE L1 7067 7147 -174 413 339 155 31 chr2 203361550 203362040 -47325814 + L2 LINE L2 915 1465 -1849 248 210 42 76 chr2 203362089 203362208 -47325646 + L2 LINE L2 1770 1884 -1430 2190 111 7 0 chr2 203362342 203362639 -47325215 + AluSx SINE Alu 1 299 -13 284 288 41 0 chr2 203363036 203363109 -47324745 + MIR3 SINE MIR 108 183 -25 1459 199 38 0 chr2 203363485 203363777 -47324077 + AluJb SINE Alu 1 303 -9 2002 116 10 3 chr2 203364014 203364307 -47323547 + AluSq SINE Alu 1 295 -18 225 119 0 0 chr2 203364385 203364427 -47323427 + (TGGA)n Simple_repeat Simple_repeat 4 45 0 2124 133 0 0 chr2 203364432 203364725 -47323129 - AluSq SINE Alu -20 293 1 2069 94 19 42 chr2 203364867 203365028 -47322826 - AluSx SINE Alu -12 300 148 2216 84 39 0 chr2 203365028 203365314 -47322540 - AluY SINE Alu -14 297 1 2069 94 19 42 chr2 203365314 203365459 -47322395 - AluSx SINE Alu -164 148 1 2160 115 0 0 chr2 203365583 203365871 -47321983 - AluSx SINE Alu -24 288 1 2338 74 0 7 chr2 203366383 203366682 -47321172 - AluSg SINE Alu -13 297 1 581 286 22 27 chr2 203366752 203366937 -47320917 - MIR SINE MIR -32 230 47 24 85 0 0 chr2 203367056 203367115 -47320739 + AT_rich Low_complexity Low_complexity 1 59 0 806 196 9 96 chr2 203367314 203367427 -47320427 - MER6B DNA MER2_type -655 210 125 476 168 104 56 chr2 203367427 203367552 -47320302 + FLAM_A SINE Alu 3 133 0 806 196 9 96 chr2 203367552 203367667 -47320187 - MER6B DNA MER2_type -740 125 2 646 221 50 33 chr2 203367763 203367792 -47320062 + MIR SINE MIR 49 76 -186 2446 74 0 0 chr2 203367792 203368091 -47319763 - AluSc SINE Alu -10 299 1 646 221 50 33 chr2 203368091 203368242 -47319612 + MIR SINE MIR 76 232 -30 29 47 0 0 chr2 203368243 203368286 -47319568 + AT_rich Low_complexity Low_complexity 1 43 0 27 29 0 0 chr2 203368595 203368629 -47319225 + AT_rich Low_complexity Low_complexity 1 34 0 38 39 0 0 chr2 203368993 203369045 -47318809 + AT_rich Low_complexity Low_complexity 1 52 0 24 32 0 0 chr2 203369188 203369219 -47318635 + AT_rich Low_complexity Low_complexity 1 31 0 2189 112 3 0 chr2 203370863 203371194 -47316660 - AluSp SINE Alu 0 332 1 1483 107 0 19 chr2 203371274 203371480 -47316374 - AluSx SINE Alu -110 202 1 219 279 89 63 chr2 203371665 203371823 -47316031 + L2 LINE L2 3146 3307 -6 2302 86 3 3 chr2 203372065 203372366 -47315488 - AluSg SINE Alu -9 301 1 21 71 0 0 chr2 203372441 203372483 -47315371 + AT_rich Low_complexity Low_complexity 1 42 0 476 258 137 17 chr2 203372642 203372968 -47314886 + L1MC4a LINE L1 5523 5819 -302 24 32 0 0 chr2 203373664 203373695 -47314159 + AT_rich Low_complexity Low_complexity 1 31 0 2027 131 7 3 chr2 203373765 203374055 -47313799 - AluSx SINE Alu -17 295 5 1276 209 190 47 chr2 203374190 203374654 -47313200 + MLT1F LTR MaLR 5 534 -8 323 290 90 30 chr2 203374700 203374900 -47312954 + L1ME3 LINE L1 5056 5267 -879 408 235 36 20 chr2 203374911 203375111 -47312743 + L1ME3 LINE L1 5281 5484 -691 410 224 130 0 chr2 203375187 203375348 -47312506 + L1MC5 LINE L1 7262 7443 -518 357 159 0 0 chr2 203375565 203375628 -47312226 + (TA)n Simple_repeat Simple_repeat 1 63 0 485 207 38 127 chr2 203375631 203375844 -47312010 + L1MC5 LINE L1 7701 7894 -67 1773 174 0 4 chr2 203375911 203376186 -47311668 + AluJb SINE Alu 5 278 -34 219 36 0 0 chr2 203376189 203376217 -47311637 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 238 236 18 0 chr2 203376257 203376312 -47311542 + L1ME3 LINE L1 5507 5562 -559 715 218 183 42 chr2 203376314 203376490 -47311364 + MER46C DNA MER2_type 9 159 -179 3633 121 4 11 chr2 203376490 203377021 -47310833 + MER1A DNA MER1_type 1 527 0 715 218 183 42 chr2 203377021 203377133 -47310721 + MER46C DNA MER2_type 159 338 0 2556 34 7 0 chr2 203377154 203377451 -47310403 - AluY SINE Alu -12 299 1 363 325 45 15 chr2 203377471 203377705 -47310149 + L1ME3 LINE L1 5588 5829 -333 1788 178 3 0 chr2 203377984 203378271 -47309583 - AluJb SINE Alu -17 295 8 201 39 0 0 chr2 203378275 203378301 -47309553 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 583 174 14 0 chr2 203379663 203379807 -47308047 + GA-rich Low_complexity Low_complexity 1 146 0 1959 147 7 0 chr2 203379940 203380232 -47307622 + AluSx SINE Alu 2 295 -17 2168 125 33 0 chr2 203380647 203380950 -47306904 - AluSq SINE Alu 0 313 1 2382 88 17 0 chr2 203381562 203381857 -47305997 - AluSc SINE Alu -9 300 1 279 0 0 0 chr2 203382206 203382237 -47305617 + (CA)n Simple_repeat Simple_repeat 2 32 0 1976 132 37 7 chr2 203382519 203382814 -47305040 - AluSx SINE Alu -8 304 1 2259 109 0 0 chr2 203383400 203383703 -47304151 + AluSx SINE Alu 3 305 -7 1965 134 18 0 chr2 203383936 203384255 -47303599 + AluSx SINE Alu 1 324 0 231 94 0 0 chr2 203385165 203385197 -47302657 + U2 snRNA snRNA 2 33 -155 2301 93 0 17 chr2 203385458 203385759 -47302095 - AluY SINE Alu -15 296 1 2301 95 3 0 chr2 203385759 203386053 -47301801 - AluSg1 SINE Alu -14 295 1 21 36 0 0 chr2 203386668 203386696 -47301158 + AT_rich Low_complexity Low_complexity 1 28 0 2033 131 13 10 chr2 203387171 203387476 -47300378 + AluSx SINE Alu 1 306 -6 231 217 43 0 chr2 203387486 203387555 -47300299 + (TTA)n Simple_repeat Simple_repeat 3 74 0 29 0 0 0 chr2 203387981 203388010 -47299844 + AT_rich Low_complexity Low_complexity 1 29 0 550 283 66 0 chr2 203388019 203388171 -47299683 - MIR SINE MIR -89 173 12 2379 95 0 0 chr2 203388356 203388650 -47299204 + AluSg SINE Alu 1 294 -16 1745 159 58 4 chr2 203389155 203389431 -47298423 + AluJb SINE Alu 1 291 -21 31 26 0 0 chr2 203389450 203389488 -47298366 + AT_rich Low_complexity Low_complexity 1 38 0 553 258 98 12 chr2 203389707 203389870 -47297984 - MIR SINE MIR -51 211 35 2185 114 3 0 chr2 203390637 203390984 -47296870 + AluSx SINE Alu 1 312 0 237 175 0 0 chr2 203391039 203391079 -47296775 + Alu SINE Alu 8 47 -86 * 285 174 0 0 chr2 203391076 203391122 -47296732 + AluJ/FRAM SINE Alu 229 274 -28 2135 122 0 30 chr2 203391129 203391433 -47296421 - AluSg SINE Alu -15 295 1 34 0 0 0 chr2 203391445 203391479 -47296375 + AT_rich Low_complexity Low_complexity 1 34 0 5365 183 10 4 chr2 203391498 203392622 -47295232 + L1P LINE L1 4011 5141 -1005 405 107 40 0 chr2 203392722 203392797 -47295057 + L1MA5 LINE L1 6221 6298 -2 742 146 116 0 chr2 203392824 203392988 -47294866 + L1MA8 LINE L1 6104 6286 -5 1861 142 32 7 chr2 203393231 203393513 -47294341 + AluJo SINE Alu 1 289 -23 1634 223 37 7 chr2 203393518 203393954 -47293900 + L1ME LINE L1 4412 4860 -1286 1380 218 109 8 chr2 203395816 203396346 -47291508 + L1ME LINE L1 4845 5433 -733 4184 176 6 38 chr2 203396346 203397087 -47290767 - L1 LINE L1 -1129 5017 4254 2359 80 7 3 chr2 203397087 203397389 -47290465 - AluSp SINE Alu -10 303 1 4184 176 6 38 chr2 203397389 203397516 -47290338 - L1 LINE L1 -1892 4254 4181 1974 144 0 26 chr2 203397516 203397828 -47290026 - AluSx SINE Alu -8 304 1 4184 176 6 38 chr2 203397828 203397933 -47289921 - L1 LINE L1 -1965 4181 4074 1402 178 87 22 chr2 203397933 203398208 -47289646 + AluJo SINE Alu 1 293 -19 1611 209 3 14 chr2 203398220 203398517 -47289337 + AluJo SINE Alu 1 294 -18 314 189 189 0 chr2 203398587 203398677 -47289177 - L1ME4a LINE L1 -74 6047 5941 287 274 88 18 chr2 203398684 203398797 -47289057 - L2 LINE L2 -4 3309 3189 2016 107 7 14 chr2 203399044 203399333 -47288521 + AluY SINE Alu 1 287 -24 606 74 0 42 chr2 203399650 203399745 -47288109 - AluSp/q SINE Alu -2 311 221 2348 67 7 10 chr2 203399892 203400189 -47287665 + AluY SINE Alu 1 296 -15 203 306 0 0 chr2 203400283 203400345 -47287509 - MIR SINE MIR -87 175 114 543 274 120 14 chr2 203400367 203400575 -47287279 - MIR SINE MIR -12 250 21 2162 65 0 38 chr2 203401782 203402108 -47285746 - AluY SINE Alu 0 315 1 229 202 97 27 chr2 203402628 203402712 -47285142 + MIR SINE MIR 66 157 -51 2643 26 0 3 chr2 203403110 203403417 -47284437 - AluYa5 SINE Alu -4 307 2 2452 85 0 3 chr2 203403865 203404171 -47283683 + AluSx SINE Alu 1 305 -7 1220 266 91 103 chr2 203404189 203404582 -47283272 - L2 LINE L2 -337 2977 2594 714 142 8 30 chr2 203404582 203404716 -47283138 + FLAM_C SINE Alu 1 131 -2 1220 266 91 103 chr2 203404716 203405011 -47282843 - L2 LINE L2 -720 2594 2297 647 114 45 68 chr2 203405056 203405188 -47282666 - MER58 DNA MER1_type -2155 265 137 1137 184 44 22 chr2 203405297 203405568 -47282286 - AluJo SINE Alu -30 282 6 394 222 46 19 chr2 203405605 203405713 -47282141 + L1MC5 LINE L1 7803 7913 -48 191 200 67 17 chr2 203406541 203406601 -47281253 + L2 LINE L2 3159 3221 -92 2005 147 3 6 chr2 203406976 203407288 -47280566 - AluSx SINE Alu -1 311 1 285 71 0 0 chr2 203407288 203407330 -47280524 - L1MD1 LINE L1 -22 6220 6179 1646 174 3 7 chr2 203407434 203407746 -47280108 + AluJb SINE Alu 2 312 0 3315 170 66 14 chr2 203407917 203408716 -47279138 - L1MB8 LINE L1 -81 6097 5211 1039 140 0 30 chr2 203409060 203409224 -47278630 - AluJb SINE Alu -21 291 133 279 243 51 89 chr2 203410173 203410305 -47277549 + L1MC5 LINE L1 7711 7834 -127 2150 75 23 0 chr2 203410305 203410570 -47277284 + AluSg SINE Alu 24 294 -16 279 243 51 89 chr2 203410570 203410651 -47277203 + L1MC5 LINE L1 7834 7916 -45 1508 98 5 5 chr2 203410744 203410947 -47276907 - AluSq SINE Alu -110 203 1 7502 131 49 43 chr2 203411357 203412086 -47275768 - L1MA3 LINE L1 0 6305 5582 2040 119 4 0 chr2 203412086 203412364 -47275490 + AluSg SINE Alu 1 279 -31 7502 131 49 43 chr2 203412364 203413366 -47274488 - L1MA3 LINE L1 -723 5582 4588 2318 104 0 0 chr2 203413366 203413673 -47274181 - AluSq SINE Alu -6 307 1 7502 131 49 43 chr2 203413673 203413996 -47273858 - L1MA3 LINE L1 -1717 4588 4269 615 81 0 0 chr2 203413996 203414082 -47273772 + (TTCC)n Simple_repeat Simple_repeat 1 86 0 7502 131 49 43 chr2 203414082 203414361 -47273493 - L1MA3 LINE L1 -2036 4269 3862 1923 181 50 40 chr2 203414362 203414426 -47273428 - MLT2A2 LTR ERVL 0 554 492 2149 70 77 14 chr2 203414426 203414712 -47273142 - AluSg SINE Alu -6 304 1 1923 181 50 40 chr2 203414712 203415195 -47272659 - MLT2A2 LTR ERVL -62 492 1 733 117 67 0 chr2 203415195 203415315 -47272539 - L1 LINE L1 -2285 3861 3734 771 218 111 42 chr2 203415629 203415918 -47271936 + L1MC5 LINE L1 7260 7568 -393 685 163 152 65 chr2 203415938 203416214 -47271640 + L1MC5 LINE L1 7617 7916 -45 189 165 47 24 chr2 203416626 203416711 -47271143 + (TATG)n Simple_repeat Simple_repeat 2 88 0 1040 127 38 0 chr2 203416985 203417143 -47270711 - L1MB4 LINE L1 -6 6174 6011 1989 156 3 10 chr2 203417167 203417481 -47270373 - AluSx SINE Alu 0 312 1 656 182 0 77 chr2 203417547 203417690 -47270164 - FLAM_A SINE Alu -1 132 1 2480 80 0 6 chr2 203418185 203418496 -47269358 + AluY SINE Alu 1 309 -2 714 123 19 0 chr2 203418567 203418673 -47269181 - FLAM_A SINE Alu -9 133 26 2013 133 7 3 chr2 203419079 203419372 -47268482 + AluSx SINE Alu 1 294 -18 1157 112 0 56 chr2 203419380 203419577 -47268277 - Tigger4(Zombi) DNA MER2_type 0 2731 2546 211 70 23 23 chr2 203419577 203419620 -47268234 + (TA)n Simple_repeat Simple_repeat 2 44 0 2556 66 0 0 chr2 203419620 203419921 -47267933 - AluY SINE Alu -10 301 1 2146 100 7 0 chr2 203420485 203420822 -47267032 - AluSg SINE Alu 0 339 1 2020 148 0 3 chr2 203420824 203421121 -47266733 - AluSx SINE Alu -16 296 1 2379 72 3 28 chr2 203421699 203422019 -47265835 + AluSp SINE Alu 1 312 -1 1685 175 0 24 chr2 203423017 203423308 -47264546 + AluJo SINE Alu 11 294 -18 879 164 40 7 chr2 203425402 203425672 -47262182 - L1MA9 LINE L1 0 6312 5938 1577 160 89 11 chr2 203426079 203426361 -47261493 + AluJb SINE Alu 1 304 -8 1052 155 11 27 chr2 203426502 203426689 -47261165 - FRAM SINE Alu 0 176 1 2544 47 0 7 chr2 203426742 203427041 -47260813 - AluY SINE Alu -14 297 1 626 258 39 16 chr2 203427042 203427224 -47260630 - L1ME3 LINE L1 -56 6106 5921 238 204 0 125 chr2 203427240 203427298 -47260556 - L1ME3 LINE L1 -343 5819 5774 1600 180 0 41 chr2 203427298 203427592 -47260262 - AluJb SINE Alu -28 284 3 238 204 0 125 chr2 203427592 203427621 -47260233 - L1ME3 LINE L1 -388 5774 5743 1604 155 0 8 chr2 203427645 203427896 -47259958 - AluJo SINE Alu -63 249 1 494 168 10 69 chr2 203428029 203428130 -47259724 - FLAM_C SINE Alu -18 125 31 404 160 32 11 chr2 203428171 203428265 -47259589 - L1ME3 LINE L1 -840 5306 5211 1701 163 51 0 chr2 203428540 203428816 -47259038 + AluJo SINE Alu 11 300 -12 1907 219 89 20 chr2 203429080 203429588 -47258266 - L1ME1 LINE L1 -20 6146 5604 2892 13 0 0 chr2 203429610 203429922 -47257932 - AluYb8 SINE Alu -6 312 1 392 255 38 0 chr2 203430082 203430188 -47257666 + MER58C DNA MER1_type 2 111 -104 1881 138 17 3 chr2 203430207 203430504 -47257350 + AluSx SINE Alu 1 301 -11 251 105 0 26 chr2 203430504 203430542 -47257312 + L1ME LINE L1 5776 5812 -352 421 238 0 0 chr2 203430543 203430623 -47257231 + MER58C DNA MER1_type 127 206 -9 2364 94 7 0 chr2 203430733 203431042 -47256812 - AluSp SINE Alu -2 311 1 183 42 0 0 chr2 203431043 203431067 -47256787 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1649 191 0 3 chr2 203431071 203431354 -47256500 - AluJb SINE Alu -30 282 1 1534 188 12 0 chr2 203431495 203431751 -47256103 - AluJo SINE Alu -53 259 1 3324 163 28 24 chr2 203432045 203432621 -47255233 - MER70B LTR ERVL 0 578 1 388 270 174 17 chr2 203432706 203432884 -47254970 + MIR SINE MIR 2 207 -55 2245 104 3 0 chr2 203433418 203433707 -47254147 + AluSg SINE Alu 1 290 -20 2160 125 0 0 chr2 203434093 203434390 -47253464 + AluSx SINE Alu 1 297 -15 22 94 0 0 chr2 203434493 203434557 -47253297 + AT_rich Low_complexity Low_complexity 1 64 0 2232 83 21 0 chr2 203434901 203435189 -47252665 + AluY SINE Alu 1 294 -17 1471 179 39 14 chr2 203435300 203435579 -47252275 + AluJo SINE Alu 1 286 -26 639 188 23 23 chr2 203435647 203435775 -47252079 - FRAM SINE Alu -1 175 48 1332 195 0 0 chr2 203435809 203436030 -47251824 - AluJo SINE Alu -91 221 1 2086 119 58 0 chr2 203436951 203437246 -47250608 - AluSx SINE Alu 0 312 1 2115 120 0 0 chr2 203437487 203437770 -47250084 + AluSx SINE Alu 1 283 -29 1770 139 3 40 chr2 203437797 203438098 -47249756 + AluSx SINE Alu 1 290 -22 2168 117 3 3 chr2 203438198 203438496 -47249358 + AluSx SINE Alu 1 298 -14 24 53 0 0 chr2 203438637 203438675 -47249179 + AT_rich Low_complexity Low_complexity 1 38 0 417 256 199 16 chr2 203438822 203439013 -47248841 - MLT1J LTR MaLR -15 496 271 1343 199 9 60 chr2 203439847 203440163 -47247691 - AluJb SINE Alu -12 300 1 27 0 0 0 chr2 203440403 203440430 -47247424 + AT_rich Low_complexity Low_complexity 1 27 0 1588 185 27 3 chr2 203440575 203440873 -47246981 - AluJo SINE Alu -7 305 1 1167 179 14 18 chr2 203441198 203441421 -47246433 - AluJo SINE Alu -90 222 1 2368 96 3 0 chr2 203441841 203442142 -47245712 + AluSp SINE Alu 1 302 -11 1867 138 11 0 chr2 203443372 203443641 -47244213 - AluSx SINE Alu -36 276 5 319 361 125 5 chr2 203444221 203444429 -47243425 - L2 LINE L2 -1 3271 3039 2479 28 0 3 chr2 203444702 203445006 -47242848 + AluY SINE Alu 1 303 0 225 214 0 0 chr2 203447166 203447208 -47240646 - L3 LINE CR1 -13 1564 1523 27 29 0 0 chr2 203447255 203447289 -47240565 + AT_rich Low_complexity Low_complexity 1 34 0 245 114 0 0 chr2 203447887 203447931 -47239923 - L1ME4a LINE L1 -112 6009 5966 21 0 0 0 chr2 203448029 203448050 -47239804 + AT_rich Low_complexity Low_complexity 1 21 0 2394 39 7 0 chr2 203448135 203448451 -47239403 - AluY SINE Alu 0 318 1 2238 100 0 3 chr2 203448526 203448844 -47239010 - AluSx SINE Alu 0 312 1 1094 237 36 67 chr2 203448854 203449298 -47238556 - L1ME4a LINE L1 -516 5648 5400 611 217 0 0 chr2 203449383 203449503 -47238351 - L1MB5 LINE L1 -38 6136 6017 1649 224 100 43 chr2 203449514 203449931 -47237923 - L1ME1 LINE L1 -339 5896 5504 2164 153 35 12 chr2 203449931 203450271 -47237583 + MER7A DNA MER2_type 1 346 0 1649 224 100 43 chr2 203450271 203450576 -47237278 - L1ME1 LINE L1 -731 5504 5218 2107 112 0 3 chr2 203450576 203450863 -47236991 - AluSg SINE Alu -24 286 1 1649 224 100 43 chr2 203450863 203451039 -47236815 - L1ME1 LINE L1 -1017 5218 5053 2204 127 149 3 chr2 203451039 203451409 -47236445 - MSTB1 LTR MaLR -4 428 5 1649 224 100 43 chr2 203451409 203451470 -47236384 - L1ME1 LINE L1 -1182 5053 4884 821 231 159 78 chr2 203451439 203451602 -47236252 - L1ME1 LINE L1 -1630 4585 4437 * 835 156 8 8 chr2 203451602 203451730 -47236124 + FLAM_C SINE Alu 1 128 -5 821 231 159 78 chr2 203451730 203452030 -47235824 - L1ME1 LINE L1 -1778 4437 4084 2101 144 0 0 chr2 203452030 203452342 -47235512 - AluSx SINE Alu 0 312 1 2031 126 7 10 chr2 203452352 203452646 -47235208 - AluSx SINE Alu -19 293 1 1074 117 0 0 chr2 203452646 203452791 -47235063 - AluSq/x SINE Alu -168 145 1 297 256 12 12 chr2 203452791 203452877 -47234977 - L1ME1 LINE L1 -2293 3922 3837 369 145 0 0 chr2 203452879 203452941 -47234913 + (CA)n Simple_repeat Simple_repeat 2 63 0 2863 217 64 93 chr2 203452948 203453014 -47234840 - L1ME1 LINE L1 -2387 3828 3762 2166 38 45 8 chr2 203453014 203453280 -47234574 + AluY SINE Alu 20 295 -16 2863 217 64 93 chr2 203453280 203453676 -47234178 - L1ME1 LINE L1 -2453 3762 3356 2454 62 7 10 chr2 203453676 203453985 -47233869 - AluY SINE Alu -3 308 1 2863 217 64 93 chr2 203453985 203454218 -47233636 - L1ME1 LINE L1 -2859 3356 3118 2317 102 0 0 chr2 203454218 203454513 -47233341 - AluSx SINE Alu -12 300 6 2863 217 64 93 chr2 203454513 203454673 -47233181 - L1ME1 LINE L1 -3097 3118 2955 2387 93 0 0 chr2 203454673 203454973 -47232881 - AluSq SINE Alu -13 300 1 2863 217 64 93 chr2 203454973 203455052 -47232802 - L1ME1 LINE L1 -3260 2955 2875 1227 208 9 69 chr2 203455052 203455369 -47232485 - AluJo SINE Alu -12 300 3 2863 217 64 93 chr2 203455369 203455622 -47232232 - L1ME1 LINE L1 -3340 2875 2680 2234 110 10 0 chr2 203455622 203455923 -47231931 - AluSx SINE Alu -8 304 1 2863 217 64 93 chr2 203455923 203456099 -47231755 - L1ME1 LINE L1 -3535 2680 2500 1236 110 12 0 chr2 203456099 203456272 -47231582 - AluSc SINE Alu -3 306 132 2137 133 10 0 chr2 203456272 203456580 -47231274 - AluSx SINE Alu -1 311 1 536 258 99 43 chr2 203456583 203456754 -47231100 - L1ME1 LINE L1 -3710 2517 2357 2136 142 0 0 chr2 203456754 203457056 -47230798 - AluSg SINE Alu -8 302 1 536 258 99 43 chr2 203457056 203457216 -47230638 - L1ME1 LINE L1 -3870 2357 2191 1428 200 59 15 chr2 203457216 203457524 -47230330 - AluJo SINE Alu 0 322 3 215 333 0 67 chr2 203457560 203457695 -47230159 + MIR SINE MIR 91 216 -46 1386 155 17 0 chr2 203458555 203458787 -47229067 - Tigger3(Golem) DNA MER2_type -2 3027 2792 360 109 0 0 chr2 203458811 203458866 -47228988 - Tigger3(Golem) DNA MER2_type -2910 119 65 22486 84 11 21 chr2 203458878 203461425 -47226429 - L1PA8 LINE L1 -3 6484 3914 2281 107 3 0 chr2 203461425 203461734 -47226120 - AluSg SINE Alu 0 310 1 22486 84 11 21 chr2 203461734 203462564 -47225290 - L1PA8 LINE L1 -2573 3914 3078 1641 101 0 0 chr2 203462564 203462782 -47225072 - AluSg SINE Alu -92 218 1 22486 84 11 21 chr2 203462782 203463780 -47224074 - L1PA8 LINE L1 -3409 3078 2158 4104 52 20 20 chr2 203463774 203464156 -47223698 - L1P LINE L1 -755 5391 5007 * 2464 51 10 0 chr2 203464156 203464451 -47223403 - AluY SINE Alu -13 298 1 4104 52 20 20 chr2 203464451 203464667 -47223187 - L1P LINE L1 -1138 5008 4793 307 0 0 0 chr2 203464666 203464702 -47223152 - L1P LINE L1 -731 5423 5388 * 2300 39 0 45 chr2 203464701 203464831 -47223023 + L1P2 LINE L1 5398 5532 -622 2509 68 0 7 chr2 203464831 203465139 -47222715 - AluY SINE Alu -5 306 1 2300 39 0 45 chr2 203465139 203465320 -47222534 + L1P2 LINE L1 5532 5695 -459 7294 40 7 1 chr2 203465368 203466517 -47221337 + L1PA5 LINE L1 5001 6154 0 11245 113 20 47 chr2 203466517 203468686 -47219168 - L1PA8 LINE L1 -4288 2173 6 490 195 0 0 chr2 203468689 203468771 -47219083 - Tigger3(Golem) DNA MER2_type -2946 83 2 481 212 34 8 chr2 203468898 203469016 -47218838 - MER58B DNA MER1_type 0 341 221 1227 80 0 0 chr2 203469265 203469416 -47218438 + AluSq/x SINE Alu 1 151 -161 2318 106 3 0 chr2 203469427 203469766 -47218088 - L1PA16 LINE L1 -153 6013 5674 734 213 86 25 chr2 203469895 203470092 -47217762 - MIR SINE MIR -26 236 28 225 0 0 0 chr2 203470770 203470795 -47217059 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 507 161 241 0 chr2 203470831 203470968 -47216886 + MER21A LTR ERV1 1 170 -761 764 140 6 70 chr2 203470972 203471129 -47216725 + MER21A LTR ERV1 578 724 -207 539 191 259 25 chr2 203471130 203471292 -47216562 + AluJb SINE Alu 113 312 0 348 227 62 8 chr2 203471352 203471480 -47216374 - L1ME4a LINE L1 -14 6107 5973 2159 132 0 0 chr2 203471887 203472183 -47215671 - AluSx SINE Alu -16 296 1 2164 189 52 50 chr2 203472254 203472758 -47215096 + MLT1D LTR MaLR 1 505 0 1295 156 0 38 chr2 203473114 203473351 -47214503 - AluJo SINE Alu -1 311 84 622 212 64 0 chr2 203473352 203473534 -47214320 + L1MD1 LINE L1 5608 5828 -414 290 256 0 24 chr2 203473557 203473639 -47214215 + L1ME2 LINE L1 5973 6052 -112 2360 244 81 31 chr2 203473987 203475373 -47212481 + L1M4 LINE L1 2016 3183 -4382 2127 109 27 14 chr2 203475373 203475667 -47212187 + AluSq SINE Alu 1 298 -15 7418 193 55 53 chr2 203477447 203477908 -47209946 + L1M4 LINE L1 3140 3599 -3966 549 0 0 0 chr2 203477908 203477969 -47209885 + (CA)n Simple_repeat Simple_repeat 2 62 0 7418 193 55 53 chr2 203477969 203478008 -47209846 + L1M4 LINE L1 3599 3636 -3929 2406 86 3 0 chr2 203478008 203478309 -47209545 - AluY SINE Alu -9 302 1 7418 193 55 53 chr2 203478309 203478428 -47209426 + L1M4 LINE L1 3636 3753 -3812 2109 181 68 2 chr2 203478428 203478827 -47209027 + MSTB LTR MaLR 2 426 0 7418 193 55 53 chr2 203478827 203479376 -47208478 + L1M4 LINE L1 3753 4299 -3266 2057 117 6 19 chr2 203479376 203479692 -47208162 + AluSq SINE Alu 2 313 0 7418 193 55 53 chr2 203479692 203479957 -47207897 + L1M4 LINE L1 4299 4562 -3003 2283 66 56 0 chr2 203479957 203480245 -47207609 + AluY SINE Alu 1 304 -7 7418 193 55 53 chr2 203480245 203480386 -47207468 + L1M4 LINE L1 4562 4701 -2864 2181 115 0 0 chr2 203480386 203480674 -47207180 + AluSx SINE Alu 1 288 -24 7418 193 55 53 chr2 203480674 203481610 -47206244 + L1M4 LINE L1 4701 5673 -1892 1540 123 5 0 chr2 203481732 203481943 -47205911 + AluSp SINE Alu 90 301 -12 1710 130 20 4 chr2 203482132 203482379 -47205475 + AluSx SINE Alu 46 296 -16 490 245 34 54 chr2 203482409 203482707 -47205147 + L1M4 LINE L1 6361 6652 -913 246 215 37 20 chr2 203482738 203482806 -47205048 - MIR3 SINE MIR -28 180 123 317 205 175 53 chr2 203482920 203483091 -47204763 - L2 LINE L2 0 3313 3122 25 31 0 0 chr2 203483421 203483453 -47204401 + AT_rich Low_complexity Low_complexity 1 32 0 291 54 0 0 chr2 203483459 203483496 -47204358 + (TG)n Simple_repeat Simple_repeat 2 38 0 2567 146 76 11 chr2 203483724 203483861 -47203993 - L1MA8 LINE L1 -7 6284 6157 2194 118 0 0 chr2 203483861 203484148 -47203706 - AluSx SINE Alu -25 287 1 2567 146 76 11 chr2 203484148 203484550 -47203304 - L1MA8 LINE L1 -134 6157 5710 1778 169 0 43 chr2 203484563 203484865 -47202989 - AluJo SINE Alu -21 291 3 4794 148 27 8 chr2 203484885 203486164 -47201690 - L1MA4A LINE L1 -20 6280 4930 2186 109 0 17 chr2 203486205 203486507 -47201347 - AluSc SINE Alu -12 297 1 787 276 116 29 chr2 203488164 203488743 -47199111 + L1MEd LINE L1 814 1442 -4930 320 374 49 6 chr2 203488766 203488929 -47198925 + L1MEd LINE L1 1314 1483 -4901 226 241 37 46 chr2 203489337 203489445 -47198409 + L1MEd LINE L1 2390 2496 -3886 548 200 0 21 chr2 203489452 203489547 -47198307 + AluS SINE Alu 1 93 -220 189 349 30 24 chr2 203489585 203489751 -47198103 + CT-rich Low_complexity Low_complexity 4 170 0 1593 155 29 4 chr2 203489871 203490148 -47197706 - AluJb SINE Alu -28 284 1 273 250 12 0 chr2 203490162 203490242 -47197612 + L1MEd LINE L1 2616 2696 -3686 3571 100 62 21 chr2 203490243 203490822 -47197032 + LTR10E LTR ERV1 1 603 -30 575 261 86 41 chr2 203490839 203491325 -47196529 + L1MEd LINE L1 2702 3209 -3173 * 1327 226 64 8 chr2 203491313 203491703 -47196151 + L1MB7 LINE L1 5772 6183 -1 189 0 0 0 chr2 203491753 203491774 -47196080 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 652 159 9 0 chr2 203491775 203491882 -47195972 + FLAM_C SINE Alu 1 108 -35 351 231 129 12 chr2 203491894 203492149 -47195705 + L1MEd LINE L1 3309 3593 -2789 358 138 0 0 chr2 203492367 203492425 -47195429 + AluJb SINE Alu 1 58 -244 1843 136 14 3 chr2 203492431 203492725 -47195129 + L1M1 LINE L1 605 901 -6664 1607 149 0 19 chr2 203492737 203492999 -47194855 + AluJb SINE Alu 55 311 -1 221 246 200 9 chr2 203493017 203493127 -47194727 - MIR SINE MIR -13 249 119 15621 128 45 59 chr2 203493357 203495688 -47192166 + L1M1 LINE L1 16 2376 -5189 2083 125 7 7 chr2 203495688 203495984 -47191870 + AluSp SINE Alu 1 296 -17 838 168 155 0 chr2 203495984 203496139 -47191715 + AluSg/x SINE Alu 132 310 0 15621 128 45 59 chr2 203496139 203496582 -47191272 + L1M1 LINE L1 2374 2906 -4659 6881 90 27 15 chr2 203496582 203497627 -47190227 + MER11C LTR ERVK 1 1057 -14 2268 81 7 26 chr2 203497693 203498000 -47189854 + AluY SINE Alu 1 301 -10 275 295 0 0 chr2 203498303 203498364 -47189490 - L2 LINE L2 -2 3270 3210 2376 97 0 0 chr2 203498617 203498916 -47188938 + AluSg SINE Alu 1 299 -11 2112 114 7 13 chr2 203499297 203499596 -47188258 + AluSx SINE Alu 1 297 -15 1492 109 35 0 chr2 203499737 203499966 -47187888 - MSTB2 LTR MaLR 0 457 221 2457 123 45 14 chr2 203500467 203500888 -47186966 + MSTB2 LTR MaLR 24 457 0 22 0 0 0 chr2 203501919 203501941 -47185913 + AT_rich Low_complexity Low_complexity 1 22 0 202 185 37 0 chr2 203501941 203501995 -47185859 + T-rich Low_complexity Low_complexity 3 58 0 206 200 0 22 chr2 203503309 203503354 -47184500 + MIR SINE MIR 101 144 -64 520 248 198 61 chr2 203504356 203504836 -47183018 - L2 LINE L2 0 3313 2768 2179 116 76 17 chr2 203504836 203505180 -47182674 + THE1B LTR MaLR 1 364 0 564 165 0 0 chr2 203505189 203505292 -47182562 - L1MB5 LINE L1 0 6174 6072 274 222 167 0 chr2 203505367 203505457 -47182397 + MIR SINE MIR 157 261 -1 2358 81 0 3 chr2 203506414 203506712 -47181142 + AluSx SINE Alu 1 297 -15 315 331 90 8 chr2 203507934 203508067 -47179787 - MER5A DNA MER1_type -45 144 1 868 188 151 64 chr2 203508300 203508493 -47179361 + MER5C DNA MER1_type 1 230 -94 1599 185 3 30 chr2 203508493 203508790 -47179064 - AluJo SINE Alu -23 289 1 868 188 151 64 chr2 203508790 203508894 -47178960 + MER5C DNA MER1_type 230 324 0 728 262 69 60 chr2 203510344 203510443 -47177411 - L2 LINE L2 0 3313 3216 2307 96 0 0 chr2 203510443 203510734 -47177120 + AluSg1 SINE Alu 1 291 -18 728 262 69 60 chr2 203510734 203510841 -47177013 - L2 LINE L2 -97 3216 3111 180 0 0 0 chr2 203510841 203510861 -47176993 + (TATTG)n Simple_repeat Simple_repeat 2 21 0 728 262 69 60 chr2 203510861 203510985 -47176869 - L2 LINE L2 -202 3111 2979 1049 226 183 15 chr2 203511072 203511465 -47176389 - L2 LINE L2 -1145 2169 1711 2030 150 0 3 chr2 203511511 203511804 -47176050 + AluJb SINE Alu 3 294 -18 34 84 0 0 chr2 203512525 203512608 -47175246 + AT_rich Low_complexity Low_complexity 1 83 0 2027 117 0 0 chr2 203512800 203513065 -47174789 - AluSg SINE Alu -23 287 23 2370 89 3 0 chr2 203513429 203513731 -47174123 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr2 203513801 203513823 -47174031 + AT_rich Low_complexity Low_complexity 1 22 0 1754 111 8 0 chr2 203514355 203514598 -47173256 + AluSp SINE Alu 56 300 -13 2403 64 3 10 chr2 203515384 203515697 -47172157 + AluY SINE Alu 1 311 0 692 185 82 14 chr2 203515776 203515922 -47171932 - FRAM SINE Alu -20 156 1 25 0 0 0 chr2 203516019 203516044 -47171810 + AT_rich Low_complexity Low_complexity 1 25 0 320 287 133 21 chr2 203516097 203516285 -47171569 - L1MC/D LINE L1 -339 5782 5572 2267 79 3 54 chr2 203516430 203516746 -47171108 + AluSc SINE Alu 2 301 -8 399 249 58 0 chr2 203517244 203517422 -47170432 + L1M4 LINE L1 2203 2390 -3756 647 265 24 79 chr2 203518178 203518646 -47169208 + L1ME LINE L1 404 845 -5360 929 56 103 0 chr2 203518647 203518773 -47169081 + AluSg/x SINE Alu 162 300 -10 804 194 0 38 chr2 203518951 203519111 -47168743 + FRAM SINE Alu 1 153 -23 596 232 43 92 chr2 203519232 203519623 -47168231 + L1ME LINE L1 1261 1631 -4765 1848 147 6 22 chr2 203519623 203519936 -47167918 + AluJo SINE Alu 5 312 0 596 232 43 92 chr2 203519936 203519967 -47167887 + L1ME LINE L1 1631 1662 -4734 1678 153 122 0 chr2 203520029 203520496 -47167358 + L1MA8 LINE L1 5746 6298 -2 353 286 90 0 chr2 203520507 203520640 -47167214 + L1ME LINE L1 1706 1850 -4546 1968 149 3 0 chr2 203520666 203520967 -47166887 + AluJb SINE Alu 1 302 -10 1163 170 5 16 chr2 203521172 203521366 -47166488 - AluJo SINE Alu -34 278 87 331 117 0 78 chr2 203521372 203521449 -47166405 - L1MA8 LINE L1 -5 6286 6216 382 120 0 13 chr2 203521453 203521528 -47166326 - L1 LINE L1 -1707 4439 4366 2123 121 50 0 chr2 203521528 203521825 -47166029 - AluSx SINE Alu 0 312 1 925 229 41 17 chr2 203521865 203522158 -47165696 + L1ME LINE L1 5388 5687 -475 2271 103 0 3 chr2 203522298 203522598 -47165256 - AluSx SINE Alu -13 299 1 357 277 21 0 chr2 203522985 203523079 -47164775 - MIR SINE MIR -119 143 48 775 148 0 30 chr2 203523946 203524081 -47163773 + FLAM_C SINE Alu 3 133 0 2574 56 0 0 chr2 203525709 203526012 -47161842 + AluY SINE Alu 1 303 -8 2333 104 7 0 chr2 203526536 203526844 -47161010 + AluSx SINE Alu 1 310 -2 2143 111 7 0 chr2 203528071 203528360 -47159494 + AluSx SINE Alu 1 291 -21 1248 160 175 12 chr2 203529026 203529358 -47158496 - MER88 LTR ERVL 0 464 79 24 0 0 0 chr2 203530728 203530752 -47157102 + AT_rich Low_complexity Low_complexity 1 24 0 264 197 53 40 chr2 203530790 203530866 -47156988 - L1ME4a LINE L1 -72 6049 5973 1915 98 8 0 chr2 203530965 203531229 -47156625 + AluSq SINE Alu 1 266 -47 488 259 100 29 chr2 203531614 203531784 -47156070 + MIR SINE MIR 28 209 -53 209 321 75 22 chr2 203532018 203532152 -47155702 - MIR3 SINE MIR -61 147 7 405 245 174 5 chr2 203532511 203532723 -47155131 + MER112 DNA MER1_type 9 256 -4 1224 150 0 97 chr2 203533063 203533289 -47154565 + AluJo SINE Alu 1 204 -108 1590 138 0 79 chr2 203533290 203533580 -47154274 + AluJo SINE Alu 31 297 -15 40 0 0 0 chr2 203535084 203535124 -47152730 + AT_rich Low_complexity Low_complexity 1 40 0 2327 97 3 0 chr2 203536433 203536731 -47151123 + AluSq SINE Alu 5 303 -10 414 0 0 0 chr2 203537781 203537827 -47150027 + (TG)n Simple_repeat Simple_repeat 2 47 0 23 0 0 0 chr2 203538486 203538509 -47149345 + AT_rich Low_complexity Low_complexity 1 23 0 1600 191 0 17 chr2 203539319 203539607 -47148247 + AluJb SINE Alu 1 283 -29 620 174 43 29 chr2 203539748 203539886 -47147968 + Charlie4 DNA MER1_type 1820 1959 -2 2490 73 0 3 chr2 203540517 203540818 -47147036 + AluY SINE Alu 1 300 -11 2258 125 3 3 chr2 203542062 203542374 -47145480 + AluSq SINE Alu 1 312 -1 1601 161 44 7 chr2 203542692 203542965 -47144889 + AluJb SINE Alu 1 283 -29 2413 186 149 0 chr2 203543058 203543595 -47144259 + L1M3f LINE L1 6 622 -4706 308 293 36 7 chr2 203543657 203543797 -47144057 + L1MC4 LINE L1 7689 7832 -210 1580 180 3 46 chr2 203543888 203544032 -47143822 + AluJo SINE Alu 1 127 -185 2405 90 0 0 chr2 203544032 203544331 -47143523 + AluY SINE Alu 1 299 -12 1580 180 3 46 chr2 203544331 203544491 -47143363 + AluJo SINE Alu 127 292 -20 24 53 0 0 chr2 203545270 203545308 -47142546 + AT_rich Low_complexity Low_complexity 1 38 0 200 229 83 0 chr2 203546884 203546932 -47140922 + L2 LINE L2 3221 3272 0 1795 127 0 0 chr2 203547519 203547755 -47140099 - AluSx SINE Alu -74 238 3 2109 119 7 3 chr2 203547784 203548078 -47139776 - AluSq SINE Alu -18 295 1 827 183 87 0 chr2 203548095 203548379 -47139475 - L1M4 LINE L1 -741 5437 5123 3405 259 55 19 chr2 203548382 203549376 -47138478 - L1M4b LINE L1 -5800 1059 30 1384 118 81 4 chr2 203549449 203549866 -47137988 - LTR54 LTR ERV1 0 510 1 338 334 120 25 chr2 203550008 203550376 -47137478 - L1M4 LINE L1 -3335 2811 2409 247 308 56 56 chr2 203551271 203551469 -47136385 + L2 LINE L2 2488 2685 -629 275 287 36 31 chr2 203552401 203552511 -47135343 - MIR SINE MIR -63 145 37 242 279 59 0 chr2 203552637 203552705 -47135149 + MIR3 SINE MIR 115 186 -22 344 257 34 47 chr2 203552841 203552989 -47134865 - L1ME LINE L1 -382 5739 5594 2699 7 0 10 chr2 203553076 203553377 -47134477 - AluYb8 SINE Alu -20 298 1 1773 136 19 36 chr2 203553916 203554225 -47133629 + AluSx SINE Alu 1 304 -8 2019 115 0 4 chr2 203554517 203554796 -47133058 - AluSg SINE Alu -30 280 3 3792 181 45 43 chr2 203555127 203556128 -47131726 + L1MC4 LINE L1 7035 8037 -5 660 244 52 19 chr2 203556140 203556260 -47131594 + L1MC4 LINE L1 6930 7061 -981 1904 132 59 0 chr2 203556260 203556549 -47131305 + AluSx SINE Alu 1 306 -6 660 244 52 19 chr2 203556549 203556641 -47131213 + L1MC4 LINE L1 7061 7149 -893 1656 182 67 3 chr2 203556671 203557028 -47130826 + L1MB2 LINE L1 5751 6130 -41 2150 130 0 0 chr2 203557028 203557327 -47130527 + AluY SINE Alu 1 299 -12 2403 214 45 26 chr2 203557333 203557666 -47130188 + L1ME1 LINE L1 5484 5809 -357 2144 97 7 13 chr2 203557666 203557964 -47129890 + AluY SINE Alu 1 296 -15 2403 214 45 26 chr2 203557964 203558293 -47129561 + L1ME1 LINE L1 5809 6159 -7 1837 127 0 74 chr2 203558516 203558839 -47129015 + AluSx SINE Alu 1 299 -13 2201 108 10 0 chr2 203558848 203559145 -47128709 + AluSq SINE Alu 1 300 -13 234 324 7 7 chr2 203559188 203559336 -47128518 + L1M4 LINE L1 3791 3938 -2208 1313 106 0 0 chr2 203559339 203559509 -47128345 + AluSg/x SINE Alu 131 300 -10 262 295 151 15 chr2 203559509 203559762 -47128092 + L1M4 LINE L1 3933 4222 -1924 335 303 58 11 chr2 203559765 203560042 -47127812 + L1M4 LINE L1 4268 4557 -1589 216 97 0 0 chr2 203560207 203560238 -47127616 + (T)n Simple_repeat Simple_repeat 1 31 0 542 146 11 0 chr2 203560238 203560327 -47127527 - AluSc SINE Alu -114 195 106 200 229 83 0 chr2 203561760 203561808 -47126046 + L2 LINE L2 3221 3272 0 1749 94 21 8 chr2 203562395 203562630 -47125224 - AluSx SINE Alu -74 238 1 1778 113 79 25 chr2 203563601 203563857 -47123997 + MSTA LTR MaLR 91 369 -59 2236 110 3 10 chr2 203563857 203564158 -47123696 - AluSg SINE Alu -11 299 1 1778 113 79 25 chr2 203564158 203564219 -47123635 + MSTA LTR MaLR 369 425 -3 6275 75 12 2 chr2 203564258 203565847 -47122007 - L1PA8A LINE L1 -7 6124 4541 25 0 0 0 chr2 203566874 203566899 -47120955 + AT_rich Low_complexity Low_complexity 1 25 0 2124 117 3 13 chr2 203566970 203567278 -47120576 - AluSx SINE Alu -7 305 1 239 311 54 0 chr2 203568044 203568118 -47119736 + L2 LINE L2 3168 3245 -27 921 205 50 94 chr2 203568138 203568230 -47119624 + MLT1A2 LTR MaLR 11 106 -268 1929 159 0 7 chr2 203568230 203568532 -47119322 - AluJb SINE Alu -8 304 5 921 205 50 94 chr2 203568532 203568820 -47119034 + MLT1A2 LTR MaLR 106 374 0 31 0 0 0 chr2 203568968 203568999 -47118855 + AT_rich Low_complexity Low_complexity 1 31 0 798 144 0 8 chr2 203568999 203569117 -47118737 - FLAM_C SINE Alu -14 119 3 449 265 94 56 chr2 203569141 203569620 -47118234 - L1ME4a LINE L1 -49 6072 5576 11094 179 78 37 chr2 203569831 203573471 -47114383 - L1M1 LINE L1 -518 6844 3354 2061 150 0 0 chr2 203573471 203573765 -47114089 - AluSg SINE Alu -16 294 1 2324 104 0 13 chr2 203573765 203574074 -47113780 - AluSx SINE Alu -7 305 1 11094 179 78 37 chr2 203574074 203574220 -47113634 - L1M1 LINE L1 -4008 3354 3215 1992 161 107 5 chr2 203574220 203574612 -47113242 + MSTB1 LTR MaLR 1 432 0 11094 179 78 37 chr2 203574612 203575948 -47111906 - L1M1 LINE L1 -4147 3215 1266 908 284 83 34 chr2 203575964 203576888 -47110966 - L1ME4a LINE L1 -860 5286 4317 863 55 27 0 chr2 203576932 203577042 -47110812 + AluY SINE Alu 1 113 -198 409 107 0 0 chr2 203577143 203577199 -47110655 - Alu SINE Alu -257 56 1 1619 149 3 74 chr2 203577208 203577531 -47110323 - AluSq SINE Alu -13 300 1 2946 210 67 23 chr2 203577754 203578083 -47109771 - L1ME1 LINE L1 -7 6970 6657 2144 97 7 13 chr2 203578083 203578381 -47109473 - AluY SINE Alu -15 296 1 2946 210 67 23 chr2 203578381 203578720 -47109134 - L1ME1 LINE L1 -320 6657 6334 2234 125 0 0 chr2 203578720 203579016 -47108838 - AluSx SINE Alu -14 298 3 2946 210 67 23 chr2 203579016 203579045 -47108809 - L1ME1 LINE L1 -643 6334 6308 2109 119 7 3 chr2 203579045 203579339 -47108515 - AluSq SINE Alu -18 295 1 2946 210 67 23 chr2 203579339 203579640 -47108214 - L1ME1 LINE L1 -669 6308 5934 3405 259 55 19 chr2 203579643 203580637 -47107217 - L1ME1 LINE L1 -5800 1059 30 1384 118 81 4 chr2 203580710 203581127 -47106727 - LTR54 LTR ERV1 0 510 1 338 334 120 25 chr2 203581269 203581637 -47106217 - L1ME4a LINE L1 -3335 2811 2409 247 308 56 56 chr2 203582532 203582730 -47105124 + L2 LINE L2 2488 2685 -629 275 287 36 31 chr2 203583662 203583772 -47104082 - MIR SINE MIR -63 145 37 242 279 59 0 chr2 203583898 203583966 -47103888 + MIR3 SINE MIR 115 186 -22 344 257 34 47 chr2 203584102 203584250 -47103604 - L1ME LINE L1 -382 5739 5594 2711 3 0 10 chr2 203584338 203584639 -47103215 - AluYb8 SINE Alu -20 298 1 1399 94 0 11 chr2 203585030 203585210 -47102644 - AluY SINE Alu -133 178 1 1473 179 25 15 chr2 203585340 203585614 -47102240 + AluJo SINE Alu 1 277 -35 270 95 0 0 chr2 203585614 203585668 -47102186 + (CAGA)n Simple_repeat Simple_repeat 1 96 0 270 95 0 0 chr2 203585668 203585710 -47102144 + (CAGA)n Simple_repeat Simple_repeat 3 44 0 2044 156 0 3 chr2 203585891 203586193 -47101661 - AluSx SINE Alu -11 301 1 557 264 56 28 chr2 203586239 203586417 -47101437 - MIR SINE MIR -3 259 77 767 209 93 13 chr2 203586789 203587119 -47100735 + L1MD2 LINE L1 5091 5449 -717 * 969 223 113 42 chr2 203587107 203587198 -47100656 + L1MD2 LINE L1 5743 5826 -533 2211 119 0 0 chr2 203587198 203587492 -47100362 + AluSx SINE Alu 1 294 -18 969 223 113 42 chr2 203587492 203587755 -47100099 + L1MD2 LINE L1 5826 6122 -237 1731 147 0 25 chr2 203588341 203588626 -47099228 - AluJb SINE Alu -34 278 1 1192 41 0 0 chr2 203589165 203589311 -47098543 + L1PA4 LINE L1 6005 6150 -5 25 0 0 0 chr2 203589322 203589347 -47098507 + AT_rich Low_complexity Low_complexity 1 25 0 328 300 216 11 chr2 203590346 203590536 -47097318 - MIR SINE MIR -16 246 18 451 181 56 142 chr2 203590648 203590737 -47097117 - L1MB8 LINE L1 0 6178 6083 815 141 8 0 chr2 203590737 203590858 -47096996 - FLAM_A SINE Alu -11 122 1 451 181 56 142 chr2 203590858 203591000 -47096854 - L1MB8 LINE L1 -95 6083 5967 4246 73 25 27 chr2 203591000 203592128 -47095726 + MER11A LTR ERVK 1 1266 0 2098 178 71 0 chr2 203592128 203592203 -47095651 - L1MB8 LINE L1 -212 5972 5904 1970 139 0 34 chr2 203592203 203592241 -47095613 - AluSx SINE Alu 0 312 274 321 26 0 0 chr2 203592241 203592279 -47095575 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 1970 139 0 34 chr2 203592279 203592563 -47095291 - AluSx SINE Alu -38 274 1 2098 178 71 0 chr2 203592563 203592909 -47094945 - L1MB8 LINE L1 -280 5904 5521 1043 90 0 0 chr2 203592909 203593042 -47094812 + AluSq/x SINE Alu 1 133 -179 2136 136 3 0 chr2 203593065 203593367 -47094487 + AluSq SINE Alu 1 303 -10 1899 139 0 4 chr2 203593370 203593688 -47094166 + AluSg SINE Alu 1 317 0 324 0 0 0 chr2 203593731 203593767 -47094087 + (TA)n Simple_repeat Simple_repeat 2 37 0 1135 168 42 7 chr2 203593767 203594051 -47093803 - L1MB8 LINE L1 -655 5523 5231 1266 187 40 3 chr2 203594055 203594376 -47093478 - L1M4 LINE L1 -852 5294 4962 1860 146 19 7 chr2 203594404 203594712 -47093142 - AluSx SINE Alu 0 312 1 589 279 107 20 chr2 203594793 203594990 -47092864 + MIR SINE MIR 7 220 -42 293 343 118 44 chr2 203595012 203595333 -47092521 + L2 LINE L2 2513 2857 -457 198 345 82 75 chr2 203595354 203595635 -47092219 + L2 LINE L2 2990 3272 0 2278 89 13 10 chr2 203595741 203596044 -47091810 - AluSx SINE Alu -8 304 1 22 0 0 0 chr2 203596248 203596270 -47091584 + AT_rich Low_complexity Low_complexity 1 22 0 1628 179 13 46 chr2 203596811 203597118 -47090736 + AluJb SINE Alu 1 297 -15 478 202 0 0 chr2 203597267 203597356 -47090498 - MER58A DNA MER1_type -1 223 135 1186 199 34 46 chr2 203597359 203597686 -47090168 + MER2 DNA MER2_type 23 345 0 557 230 8 8 chr2 203597693 203597819 -47090035 - MER58A DNA MER1_type 0 128 3 1344 90 0 25 chr2 203598147 203598347 -47089507 - L1PA6 LINE L1 0 6154 5960 318 240 53 0 chr2 203598347 203598422 -47089432 - MIR SINE MIR -97 165 87 2050 133 0 31 chr2 203599481 203599803 -47088051 + AluSx SINE Alu 1 312 0 24 53 0 0 chr2 203600390 203600428 -47087426 + AT_rich Low_complexity Low_complexity 1 38 0 256 261 115 25 chr2 203600546 203600704 -47087150 - MIR SINE MIR 0 262 6 2272 82 45 0 chr2 203600757 203601048 -47086806 + AluSg SINE Alu 1 304 -6 297 225 11 11 chr2 203601099 203601188 -47086666 + L1MC4a LINE L1 5352 5440 -2368 950 267 54 31 chr2 203601208 203601598 -47086256 + L1MC4a LINE L1 5521 5919 -1889 3173 94 21 8 chr2 203602258 203602728 -47085126 - L1PA13 LINE L1 0 6163 5688 2152 95 27 3 chr2 203602798 203603092 -47084762 + AluSg SINE Alu 1 301 -9 311 207 47 127 chr2 203603133 203603158 -47084696 + MIR SINE MIR 125 150 -112 1732 167 3 30 chr2 203603158 203603457 -47084397 + AluJb SINE Alu 1 291 -21 311 207 47 127 chr2 203603457 203603581 -47084273 + MIR SINE MIR 150 262 0 301 310 54 0 chr2 203604166 203604295 -47083559 + L1MC4a LINE L1 7096 7231 -577 306 241 71 0 chr2 203604505 203604646 -47083208 + L1MC5 LINE L1 7609 7759 -202 243 0 0 0 chr2 203604672 203604699 -47083155 + (CA)n Simple_repeat Simple_repeat 1 27 0 1773 220 136 24 chr2 203604888 203605720 -47082134 + L1MC4 LINE L1 7126 7995 0 1177 196 46 32 chr2 203606450 203606797 -47081057 + L1MB1 LINE L1 3707 4058 -2088 * 8075 155 39 4 chr2 203606795 203607619 -47080235 + L1MA3 LINE L1 1098 1993 -5572 1593 184 14 17 chr2 203607619 203607913 -47079941 - AluJb SINE Alu -19 293 1 8075 155 39 4 chr2 203607913 203608518 -47079336 + L1MA3 LINE L1 1993 2576 -4989 15351 158 27 16 chr2 203608519 203609003 -47078851 + L1MA3 LINE L1 3363 3840 -3884 180 0 0 0 chr2 203609003 203609023 -47078831 + (TCTCCC)n Simple_repeat Simple_repeat 1 20 0 10577 29 1 137 chr2 203609023 203610569 -47077285 + SVA Other Other 52 1386 0 15351 158 27 16 chr2 203610569 203611093 -47076761 + L1MA3 LINE L1 3840 4356 -3368 2195 128 0 0 chr2 203611093 203611383 -47076471 + AluSx SINE Alu 1 290 -22 15351 158 27 16 chr2 203611383 203614697 -47073157 + L1MA3 LINE L1 4356 7724 0 4463 172 59 40 chr2 203614692 203615598 -47072256 + L1MB1 LINE L1 4360 5247 -921 * 2192 115 3 0 chr2 203615598 203615894 -47071960 + AluSq SINE Alu 1 297 -16 4463 172 59 40 chr2 203615894 203616194 -47071660 + L1MB1 LINE L1 5247 5540 -628 1511 186 16 23 chr2 203616194 203616501 -47071353 + AluJo SINE Alu 1 305 -7 4463 172 59 40 chr2 203616501 203617006 -47070848 + L1MB1 LINE L1 5540 6140 -28 2272 97 3 13 chr2 203617030 203617340 -47070514 + AluSq SINE Alu 1 307 -6 311 235 160 25 chr2 203617355 203617474 -47070380 + MIR SINE MIR 53 187 -75 1772 112 20 4 chr2 203617816 203618067 -47069787 + AluSx SINE Alu 24 278 -34 212 200 0 0 chr2 203618109 203618154 -47069700 + L2 LINE L2 3265 3309 -4 1717 138 69 0 chr2 203618605 203618881 -47068973 + AluJb SINE Alu 1 295 -17 23 33 0 0 chr2 203618881 203618911 -47068943 + AT_rich Low_complexity Low_complexity 1 30 0 1826 164 0 0 chr2 203619632 203619913 -47067941 + AluJb SINE Alu 21 301 -11 931 162 0 0 chr2 203619913 203620049 -47067805 + AluJo SINE Alu 2 137 -175 2088 138 0 7 chr2 203620049 203620345 -47067509 + AluSx SINE Alu 1 294 -18 228 182 0 0 chr2 203620348 203620392 -47067462 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 1072 166 0 0 chr2 203620395 203620558 -47067296 + AluJo SINE Alu 134 296 -16 545 341 104 33 chr2 203620696 203621527 -47066327 + L2 LINE L2 2020 2977 -337 664 307 127 41 chr2 203621712 203622021 -47065833 - L2 LINE L2 0 3313 2946 2185 98 0 14 chr2 203622021 203622345 -47065509 + AluSg SINE Alu 1 320 0 664 307 127 41 chr2 203622345 203622548 -47065306 - L2 LINE L2 -367 2946 2762 472 313 151 47 chr2 203623101 203623464 -47064390 - L2 LINE L2 -621 2693 2369 1856 126 15 4 chr2 203623464 203623735 -47064119 + AluSx SINE Alu 23 296 -16 2260 121 0 0 chr2 203623737 203624044 -47063810 + AluSx SINE Alu 1 307 -5 472 313 151 47 chr2 203624044 203624147 -47063707 - L2 LINE L2 -945 2369 2175 207 293 35 0 chr2 203624147 203624205 -47063649 + L2 LINE L2 3193 3252 -20 363 261 34 0 chr2 203624222 203624310 -47063544 + L2 LINE L2 3182 3272 0 297 0 0 0 chr2 203624339 203624372 -47063482 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 184 254 146 0 chr2 203624490 203624545 -47063309 - MIR SINE MIR -114 148 86 2114 130 0 32 chr2 203624602 203624918 -47062936 - AluJb SINE Alu -6 306 1 895 161 0 0 chr2 203625107 203625237 -47062617 + FLAM_A SINE Alu 2 131 -2 1988 142 3 7 chr2 203625446 203625735 -47062119 + AluSx SINE Alu 1 288 -24 2618 64 3 0 chr2 203625790 203626102 -47061752 - AluSp SINE Alu 0 313 1 226 320 0 0 chr2 203626393 203626493 -47061361 - Charlie1 DNA MER1_type -325 2436 2337 261 0 0 0 chr2 203626493 203626522 -47061332 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1992 110 32 4 chr2 203626525 203626806 -47061048 - AluSp SINE Alu -24 289 1 347 225 47 23 chr2 203626879 203627008 -47060846 + L1MC5 LINE L1 7772 7903 -58 251 154 0 0 chr2 203627321 203627360 -47060494 + tRNA-Ile-ATT tRNA tRNA 1 39 -38 2510 77 3 0 chr2 203627369 203627679 -47060175 + AluY SINE Alu 1 311 0 2349 101 0 0 chr2 203627800 203628108 -47059746 + AluSc SINE Alu 1 308 -1 45 39 0 13 chr2 203628148 203628169 -47059685 + AT_rich Low_complexity Low_complexity 1 21 -55 2190 123 0 19 chr2 203628169 203628487 -47059367 + AluSx SINE Alu 1 312 0 45 39 0 13 chr2 203628487 203628542 -47059312 + AT_rich Low_complexity Low_complexity 21 76 0 1802 163 3 0 chr2 203628548 203628842 -47059012 + AluJo SINE Alu 1 295 -17 21 0 0 0 chr2 203629121 203629142 -47058712 + AT_rich Low_complexity Low_complexity 1 21 0 400 245 49 86 chr2 203629169 203629238 -47058616 - L1MC4a LINE L1 -140 5981 5911 2470 73 13 0 chr2 203629238 203629541 -47058313 + AluSp SINE Alu 1 307 -6 400 245 49 86 chr2 203629541 203629716 -47058138 - L1MC4a LINE L1 -210 5911 5744 2233 120 3 0 chr2 203629848 203630156 -47057698 - AluSx SINE Alu -3 309 1 462 243 171 33 chr2 203630277 203630487 -47057367 - HAL1 LINE L1 -611 1896 1658 2298 117 0 0 chr2 203631441 203631740 -47056114 + AluSx SINE Alu 1 299 -13 1859 144 23 16 chr2 203631999 203632304 -47055550 + AluSx SINE Alu 1 307 -5 2229 118 3 13 chr2 203632314 203632629 -47055225 + AluSx SINE Alu 1 312 0 453 314 16 43 chr2 203632782 203632970 -47054884 - L2 LINE L2 0 3313 3131 259 200 0 133 chr2 203633019 203633067 -47054787 + MIR3 SINE MIR 115 151 -57 1907 160 0 10 chr2 203633067 203633380 -47054474 - AluJb SINE Alu -2 310 1 259 200 0 133 chr2 203633380 203633406 -47054448 + MIR3 SINE MIR 151 179 -29 1541 84 89 9 chr2 203633629 203633842 -47054012 - MER30 DNA MER1_type 0 230 1 415 304 29 47 chr2 203633877 203634048 -47053806 + MER5A DNA MER1_type 12 179 -10 2906 180 36 9 chr2 203634383 203634917 -47052937 - MER44D DNA MER2_type -2 603 1 436 209 0 0 chr2 203634925 203635011 -47052843 + L1MD1 LINE L1 5807 5892 -350 212 286 0 0 chr2 203635011 203635060 -47052794 + MER5A DNA MER1_type 84 132 -57 2365 88 3 0 chr2 203635673 203635978 -47051876 + AluSx SINE Alu 1 306 -6 233 276 65 56 chr2 203636311 203636525 -47051329 + L1ME4a LINE L1 5718 5933 -188 2036 118 45 0 chr2 203636549 203636837 -47051017 - AluSx SINE Alu -11 301 1 1464 231 36 21 chr2 203637092 203637426 -47050428 + Cheshire DNA MER1_type 3 341 -2079 1805 157 54 3 chr2 203637439 203637789 -47050065 + Cheshire DNA MER1_type 2053 2420 0 26 50 0 0 chr2 203637906 203637946 -47049908 + AT_rich Low_complexity Low_complexity 1 40 0 450 0 0 0 chr2 203638464 203638514 -47049340 + (CA)n Simple_repeat Simple_repeat 1 50 0 22 0 0 0 chr2 203638650 203638672 -47049182 + AT_rich Low_complexity Low_complexity 1 22 0 2005 124 0 23 chr2 203638732 203639031 -47048823 - AluSx SINE Alu -20 292 1 195 317 19 48 chr2 203639257 203639361 -47048493 - L2 LINE L2 -791 2523 2423 299 357 152 5 chr2 203639407 203639631 -47048223 + L2 LINE L2 2804 3060 -212 1655 160 0 75 chr2 203640209 203640528 -47047326 - AluJb SINE Alu -17 295 1 1894 147 0 7 chr2 203640711 203641003 -47046851 - AluJb SINE Alu -20 292 3 483 194 216 13 chr2 203641548 203641775 -47046079 + HAL1b LINE L1 912 1184 -164 240 281 34 11 chr2 203641932 203642021 -47045833 + L1ME LINE L1 5608 5698 -423 21 57 0 0 chr2 203642064 203642099 -47045755 + AT_rich Low_complexity Low_complexity 1 35 0 1204 240 55 25 chr2 203642420 203642453 -47045401 - L1ME1 LINE L1 -10 6225 6194 1629 203 0 3 chr2 203642453 203642748 -47045106 + AluJo SINE Alu 1 294 -18 1204 240 55 25 chr2 203642748 203643081 -47044773 - L1ME1 LINE L1 -41 6194 5848 1084 156 0 73 chr2 203643097 203643315 -47044539 + MLT2B1 LTR ERVL 319 520 0 1969 228 83 31 chr2 203643317 203643345 -47044509 - L1ME1 LINE L1 -380 5853 5828 1892 138 24 3 chr2 203643345 203643634 -47044220 - AluSx SINE Alu -17 295 1 1969 228 83 31 chr2 203643634 203644878 -47042976 - L1ME1 LINE L1 -405 5828 3964 2182 109 7 7 chr2 203644879 203645173 -47042681 + AluSx SINE Alu 1 294 -18 3018 208 48 19 chr2 203645242 203645871 -47041983 + MER82 DNA MER2_type 7 653 0 3603 229 91 9 chr2 203645871 203645997 -47041857 - L1ME1 LINE L1 -2291 3924 3810 2070 139 0 0 chr2 203645997 203646292 -47041562 + AluJb SINE Alu 1 295 -17 3603 229 91 9 chr2 203646292 203646804 -47041050 - L1ME1 LINE L1 -2405 3810 3341 2285 105 0 10 chr2 203646804 203647118 -47040736 - AluSx SINE Alu -1 311 1 3603 229 91 9 chr2 203647118 203647575 -47040279 - L1ME1 LINE L1 -2874 3341 2738 1498 215 128 93 chr2 203647654 203648408 -47039446 - LTR1B LTR ERV1 -37 983 1 697 259 115 27 chr2 203648416 203648915 -47038939 - L1ME1 LINE L1 -3485 2730 2172 3249 276 91 41 chr2 203648964 203649736 -47038118 - L1ME1 LINE L1 -4294 2102 1370 1344 26 7 0 chr2 203649736 203649888 -47037966 - L1PA4 LINE L1 -4 6151 5999 3249 276 91 41 chr2 203649888 203651084 -47036770 - L1ME1 LINE L1 -5026 1370 35 4526 100 41 34 chr2 203651124 203651308 -47036546 + LTR9B LTR ERV1 1 182 -462 2158 103 10 3 chr2 203651308 203651600 -47036254 + AluSp SINE Alu 3 296 -17 4526 100 41 34 chr2 203651600 203652055 -47035799 + LTR9B LTR ERV1 182 644 0 197 305 84 0 chr2 203652249 203652344 -47035510 - MIR SINE MIR -9 253 151 397 293 88 50 chr2 203652358 203652597 -47035257 - MIR SINE MIR -6 256 9 638 274 73 43 chr2 203652723 203652798 -47035056 - MLT1F1-int LTR MaLR -858 513 442 2479 75 7 0 chr2 203652798 203653105 -47034749 + AluSc SINE Alu 1 309 0 638 274 73 43 chr2 203653105 203653417 -47034437 - MLT1F1-int LTR MaLR -929 442 2 1581 224 59 100 chr2 203653420 203653486 -47034368 - MLT1F1 LTR MaLR -2 565 498 2336 96 7 0 chr2 203653486 203653788 -47034066 + AluSq SINE Alu 1 304 -9 1581 224 59 100 chr2 203653788 203654155 -47033699 - MLT1F1 LTR MaLR -69 498 133 2257 118 0 0 chr2 203654155 203654461 -47033393 - AluSx SINE Alu -6 306 1 1581 224 59 100 chr2 203654461 203654588 -47033266 - MLT1F1 LTR MaLR -434 133 2 1455 142 5 0 chr2 203654695 203654913 -47032941 - AluJb SINE Alu -7 305 87 1750 164 33 10 chr2 203654913 203655211 -47032643 - AluJo SINE Alu -6 306 1 238 235 174 43 chr2 203655418 203655533 -47032321 - L2 LINE L2 -583 2731 2602 204 314 12 38 chr2 203655661 203655836 -47032018 + MIR SINE MIR 3 220 -42 347 290 127 57 chr2 203655889 203656172 -47031682 - L2 LINE L2 -945 2369 2067 2310 93 0 0 chr2 203656416 203656706 -47031148 + AluSx SINE Alu 1 290 -22 1682 164 0 55 chr2 203657099 203657410 -47030444 - AluJb SINE Alu -18 294 1 2164 110 3 3 chr2 203657650 203657941 -47029913 + AluSx SINE Alu 2 292 -20 253 182 36 18 chr2 203658078 203658133 -47029721 + MLT1J2 LTR MaLR 68 123 -327 1019 247 136 27 chr2 203658613 203658981 -47028873 + LTR16C LTR ERVL 84 491 0 1759 137 53 17 chr2 203659582 203659882 -47027972 + AluSx SINE Alu 1 311 -1 385 198 12 25 chr2 203659972 203660053 -47027801 + L2 LINE L2 3183 3262 -10 306 0 0 0 chr2 203661507 203661541 -47026313 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 356 220 0 0 chr2 203661545 203661604 -47026250 - AluJ/FRAM SINE Alu -23 279 221 1273 162 139 4 chr2 203661606 203661872 -47025982 - AluSx SINE Alu -2 310 9 409 144 50 0 chr2 203661877 203662037 -47025817 + (TA)n Simple_repeat Simple_repeat 2 169 0 222 113 38 19 chr2 203662054 203662107 -47025747 + (TA)n Simple_repeat Simple_repeat 1 54 0 696 196 62 0 chr2 203662107 203662219 -47025635 - FLAM_C SINE Alu -22 121 3 315 167 0 0 chr2 203662655 203662721 -47025133 + (CA)n Simple_repeat Simple_repeat 1 66 0 2276 108 0 0 chr2 203662761 203663057 -47024797 + AluSx SINE Alu 1 296 -16 2062 89 82 0 chr2 203663217 203663497 -47024357 + AluY SINE Alu 1 303 -8 732 228 117 79 chr2 203664220 203664273 -47023581 + MLT1E2 LTR MaLR 5 55 -599 2231 104 0 0 chr2 203664273 203664560 -47023294 + AluSx SINE Alu 13 299 -13 732 228 117 79 chr2 203664560 203664822 -47023032 + MLT1E2 LTR MaLR 55 332 -322 862 162 20 0 chr2 203664839 203664987 -47022867 + AluSp/q SINE Alu 158 308 -5 1440 232 14 37 chr2 203664989 203665338 -47022516 + MLT1E2 LTR MaLR 286 626 0 227 238 0 0 chr2 203665399 203665441 -47022413 + MER96B DNA MER1_type? 11 52 -365 534 284 34 0 chr2 203665545 203665721 -47022133 + MER96B DNA MER1_type? 230 411 -6 2381 92 0 0 chr2 203666278 203666581 -47021273 + AluSq SINE Alu 1 303 -10 400 221 243 29 chr2 203666946 203667117 -47020737 + L1ME4a LINE L1 5705 5920 -201 3690 123 49 62 chr2 203667173 203667294 -47020560 - L1MA6 LINE L1 0 6300 6179 2364 91 0 10 chr2 203667294 203667601 -47020253 - AluSc SINE Alu -5 304 1 3690 123 49 62 chr2 203667601 203667994 -47019860 - L1MA6 LINE L1 -121 6179 5795 348 83 0 0 chr2 203667994 203668042 -47019812 + (CA)n Simple_repeat Simple_repeat 2 49 0 3690 123 49 62 chr2 203668042 203668215 -47019639 - L1MA6 LINE L1 -505 5795 5621 2258 102 0 16 chr2 203668223 203668528 -47019326 - AluSx SINE Alu -12 300 1 310 265 225 25 chr2 203668560 203668760 -47019094 + MIR SINE MIR 8 247 -15 234 321 80 56 chr2 203668871 203669195 -47018659 + L1MDa LINE L1 12 343 -6197 3387 230 126 78 chr2 203669688 203670243 -47017611 + L1MDa LINE L1 854 1381 -5159 2408 80 6 19 chr2 203670243 203670557 -47017297 + AluSg SINE Alu 1 310 0 1695 181 3 7 chr2 203670557 203670856 -47016998 + AluJo SINE Alu 7 304 -8 2318 96 3 0 chr2 203670856 203671157 -47016697 + AluSx SINE Alu 1 302 -10 3387 230 126 78 chr2 203671157 203671560 -47016294 + L1MDa LINE L1 1381 1763 -4777 1899 145 7 3 chr2 203671560 203671843 -47016011 + AluSx SINE Alu 1 284 -28 3387 230 126 78 chr2 203671843 203672379 -47015475 + L1MDa LINE L1 1763 2271 -4269 1581 187 17 7 chr2 203672379 203672668 -47015186 + AluJb SINE Alu 1 292 -20 3387 230 126 78 chr2 203672668 203672777 -47015077 + L1MDa LINE L1 2271 2373 -4167 2078 129 3 3 chr2 203672777 203673079 -47014775 + AluSx SINE Alu 3 304 -8 3387 230 126 78 chr2 203673079 203674278 -47013576 + L1MDa LINE L1 2373 3512 -3028 673 117 19 0 chr2 203674278 203674381 -47013473 + HY1 scRNA scRNA 7 111 -1 216 0 0 0 chr2 203674383 203674407 -47013447 + (CA)n Simple_repeat Simple_repeat 2 25 0 * 525 16 0 0 chr2 203674406 203674468 -47013386 + (TC)n Simple_repeat Simple_repeat 2 63 0 3387 230 126 78 chr2 203674407 203674714 -47013140 + L1MDa LINE L1 3512 4149 -2391 1698 169 77 3 chr2 203674720 203675082 -47012772 + L1ME1 LINE L1 5566 5954 -212 249 144 73 2 chr2 203675839 203675894 -47011960 + AluSp SINE Alu 122 175 -128 24 0 0 0 chr2 203675956 203675980 -47011874 + AT_rich Low_complexity Low_complexity 1 24 0 183 42 0 0 chr2 203676042 203676066 -47011788 + (CA)n Simple_repeat Simple_repeat 2 25 0 360 59 0 0 chr2 203676066 203676117 -47011737 + (TC)n Simple_repeat Simple_repeat 2 52 0 734 190 0 0 chr2 203676666 203676812 -47011042 + FLAM_C SINE Alu 2 147 0 1754 169 0 10 chr2 203676896 203677186 -47010668 - AluJb SINE Alu -25 287 1 1665 189 7 7 chr2 203677770 203678066 -47009788 + AluJb SINE Alu 1 296 -16 2005 106 4 0 chr2 203678096 203678360 -47009494 - AluSp SINE Alu -11 302 38 2279 104 0 3 chr2 203678495 203678792 -47009062 + AluSq SINE Alu 1 296 -17 2167 119 7 0 chr2 203678808 203679111 -47008743 + AluSx SINE Alu 1 305 -7 1988 169 41 35 chr2 203679150 203679696 -47008158 + MLT2A2 LTR ERVL 1 554 0 322 232 49 0 chr2 203680003 203680085 -47007769 + L1MEc LINE L1 1768 1853 -4543 1274 115 25 40 chr2 203680087 203680317 -47007537 + AluSq SINE Alu 90 316 0 2183 126 0 3 chr2 203680317 203680626 -47007228 + AluSx SINE Alu 2 309 -3 468 266 23 73 chr2 203681049 203681117 -47006737 + L1MC/D LINE L1 5583 5653 -2155 2111 106 33 0 chr2 203681117 203681418 -47006436 + AluSx SINE Alu 1 311 -1 468 266 23 73 chr2 203681418 203681567 -47006287 + L1MC/D LINE L1 5653 5789 -2019 222 171 0 0 chr2 203681584 203681625 -47006229 + (CATA)n Simple_repeat Simple_repeat 4 44 0 1861 125 3 28 chr2 203681654 203681941 -47005913 - AluSx SINE Alu -32 280 1 3999 220 93 16 chr2 203682459 203683624 -47004230 + Charlie6 DNA MER1_type 2246 3500 0 297 285 156 11 chr2 203683671 203683857 -47003997 + HAL1 LINE L1 629 841 -1666 1785 150 56 0 chr2 203683858 203684144 -47003710 + AluSx SINE Alu 1 302 -10 2363 58 3 7 chr2 203684264 203684558 -47003296 + AluSx SINE Alu 1 293 -19 2518 41 6 19 chr2 203684581 203684895 -47002959 + AluY SINE Alu 2 311 0 674 138 0 0 chr2 203684916 203685010 -47002844 + FLAM_C SINE Alu 25 118 -25 21 71 0 0 chr2 203685010 203685052 -47002802 + AT_rich Low_complexity Low_complexity 1 42 0 2802 227 133 59 chr2 203685052 203686159 -47001695 + HAL1 LINE L1 1140 2355 -152 2206 130 0 0 chr2 203686159 203686467 -47001387 + AluSx SINE Alu 1 308 -4 2802 227 133 59 chr2 203686467 203686632 -47001222 + HAL1 LINE L1 2355 2506 -1 252 305 165 55 chr2 203686715 203687679 -47000175 + L2 LINE L2 1429 2498 -816 189 0 0 0 chr2 203687803 203687824 -47000030 + (TA)n Simple_repeat Simple_repeat 2 22 0 2153 87 16 42 chr2 203687916 203688226 -46999628 + AluSg SINE Alu 1 302 -8 2493 82 3 0 chr2 203688231 203688537 -46999317 + AluSq SINE Alu 2 308 -5 530 232 148 26 chr2 203688583 203688738 -46999116 - MIR SINE MIR -74 188 15 1788 153 14 7 chr2 203689257 203689552 -46998302 + AluSx SINE Alu 1 297 -15 432 0 0 0 chr2 203689825 203689873 -46997981 + (TA)n Simple_repeat Simple_repeat 2 49 0 2161 105 0 3 chr2 203689895 203690181 -46997673 - AluSq SINE Alu -28 285 1 210 280 0 0 chr2 203690206 203690256 -46997598 - MER5A DNA MER1_type -137 52 3 343 292 200 5 chr2 203690401 203690586 -46997268 - MIR SINE MIR -38 224 4 508 82 14 0 chr2 203691408 203691481 -46996373 - AluS SINE Alu -237 75 2 216 0 0 0 chr2 203691572 203691596 -46996258 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2211 112 3 3 chr2 203691992 203692295 -46995559 + AluSx SINE Alu 1 303 -9 198 288 0 76 chr2 203692385 203692451 -46995403 + MIR SINE MIR 19 79 -183 1981 120 3 0 chr2 203692638 203692921 -46994933 + AluSx SINE Alu 27 310 -2 2218 84 28 0 chr2 203692972 203693259 -46994595 + AluSq SINE Alu 1 295 -18 21 0 0 0 chr2 203694176 203694197 -46993657 + GC_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr2 203694541 203694564 -46993290 + (CGG)n Simple_repeat Simple_repeat 3 25 0 1619 173 27 27 chr2 203695304 203695605 -46992249 + AluJb SINE Alu 1 301 -11 1008 174 0 22 chr2 203696473 203696651 -46991203 + FAM SINE Alu 1 45 -4 238 229 0 0 chr2 203696909 203696957 -46990897 + L1ME LINE L1 5536 5583 -538 2402 95 3 0 chr2 203697325 203697629 -46990225 - AluSp SINE Alu -8 305 1 1858 126 38 38 chr2 203697751 203698044 -46989810 + AluSq SINE Alu 1 293 -20 308 258 174 0 chr2 203698205 203698337 -46989517 - MER117 DNA MER1_type -42 155 1 682 218 20 0 chr2 203698386 203698533 -46989321 - MIR SINE MIR -10 252 103 2095 185 68 18 chr2 203698545 203699000 -46988854 + L1MB4 LINE L1 5349 5826 -348 1340 195 11 15 chr2 203699000 203699272 -46988582 + AluJo SINE Alu 1 271 -41 1391 175 84 73 chr2 203699289 203699591 -46988263 + L1MB4 LINE L1 5816 6113 -67 16034 123 21 20 chr2 203699591 203699801 -46988053 - Tigger1 DNA MER2_type 0 2418 2210 2459 69 0 0 chr2 203699801 203700091 -46987763 + AluY SINE Alu 1 290 -21 16034 123 21 20 chr2 203700091 203700235 -46987619 - Tigger1 DNA MER2_type -208 2210 2068 2180 128 0 0 chr2 203700235 203700540 -46987314 - AluSg SINE Alu -2 308 4 16034 123 21 20 chr2 203700540 203701654 -46986200 - Tigger1 DNA MER2_type -350 2068 944 1665 172 6 48 chr2 203701654 203701968 -46985886 + AluJo SINE Alu 1 301 -11 16034 123 21 20 chr2 203701968 203702913 -46984941 - Tigger1 DNA MER2_type -1474 944 1 1391 175 84 73 chr2 203702913 203702965 -46984889 + L1MB4 LINE L1 6113 6174 -6 2522 87 0 0 chr2 203703197 203703507 -46984347 - AluSx SINE Alu 0 312 3 942 139 0 62 chr2 203703931 203704139 -46983715 + AluSq SINE Alu 1 195 -118 324 274 0 32 chr2 203704578 203704702 -46983152 + (CCG)n Simple_repeat Simple_repeat 3 122 0 207 0 0 0 chr2 203705003 203705026 -46982828 + (CCG)n Simple_repeat Simple_repeat 3 25 0 223 279 0 16 chr2 203705249 203705310 -46982544 + (TG)n Simple_repeat Simple_repeat 1 60 0 1896 89 7 51 chr2 203706194 203706487 -46981367 - AluSc SINE Alu -14 295 16 24 53 0 0 chr2 203707109 203707147 -46980707 + AT_rich Low_complexity Low_complexity 1 38 0 2321 95 0 7 chr2 203707219 203707525 -46980329 - AluSx SINE Alu -8 304 1 2019 126 0 17 chr2 203707561 203707863 -46979991 - AluSx SINE Alu -15 297 1 1891 110 24 14 chr2 203707898 203708190 -46979664 - AluSg SINE Alu -15 295 1 246 160 174 14 chr2 203708310 203708454 -46979400 - L1MB3 LINE L1 0 6183 6017 2075 100 4 0 chr2 203708582 203708852 -46979002 - AluSp SINE Alu -42 271 1 475 152 0 2 chr2 203708855 203708938 -46978916 + HAL1b LINE L1 501 1666 -781 2315 63 7 13 chr2 203713019 203713320 -46974534 - AluY SINE Alu -12 299 1 362 0 62 0 chr2 203714128 203714176 -46973678 + (GAAAA)n Simple_repeat Simple_repeat 5 55 0 832 228 84 25 chr2 203714176 203714461 -46973393 - HAL1 LINE L1 -940 1567 1266 278 264 160 40 chr2 203714467 203714592 -46973262 + LTR33 LTR ERVL 55 194 -327 572 250 56 56 chr2 203714783 203715015 -46972839 + LTR33 LTR ERVL 282 513 -8 1422 118 110 46 chr2 203715022 203715285 -46972569 - AluJo SINE Alu -12 300 21 489 215 0 23 chr2 203715297 203715427 -46972427 - HAL1 LINE L1 -1323 1184 1058 * 1231 165 119 10 chr2 203715402 203715700 -46972154 - L1MB3 LINE L1 -2 6181 5899 275 170 149 32 chr2 203715752 203715846 -46972008 - HAL1 LINE L1 -1554 953 849 1650 157 27 17 chr2 203716203 203716503 -46971351 - AluJo SINE Alu -9 303 1 692 294 23 53 chr2 203718598 203718718 -46969136 - MIR SINE MIR -2 260 138 2287 100 3 0 chr2 203718718 203719007 -46968847 - AluSg SINE Alu -20 290 1 692 294 23 53 chr2 203719007 203719148 -46968706 - MIR SINE MIR -124 138 7 351 275 25 0 chr2 203719206 203719286 -46968568 + MIR SINE MIR 32 113 -149 2385 108 0 0 chr2 203720036 203720341 -46967513 + AluSg SINE Alu 1 305 -5 11800 25 0 0 chr2 203720344 203722410 -46965444 + L1PA3 LINE L1 4088 6152 -3 31 0 0 0 chr2 203722410 203722441 -46965413 + AT_rich Low_complexity Low_complexity 1 31 0 577 278 37 0 chr2 203722780 203722942 -46964912 - MIR3 SINE MIR -6 202 35 568 246 89 39 chr2 203723230 203723409 -46964445 + MIR3 SINE MIR 11 198 -10 1097 126 0 0 chr2 203723533 203723692 -46964162 - AluSg/x SINE Alu -8 304 146 2445 58 0 13 chr2 203724272 203724582 -46963272 - AluY SINE Alu -5 306 1 2088 116 0 0 chr2 203724595 203724887 -46962967 - AluSx SINE Alu -16 296 5 828 159 0 0 chr2 203726043 203726169 -46961685 + AluJb SINE Alu 1 126 -186 874 203 0 0 chr2 203726457 203726605 -46961249 + AluJb SINE Alu 141 288 -24 324 177 191 70 chr2 203726662 203726877 -46960977 - L1ME4a LINE L1 -39 6082 5842 2052 144 0 0 chr2 203726904 203727196 -46960658 - AluSx SINE Alu -20 292 1 1269 142 37 14 chr2 203727316 203727638 -46960216 + MLT1B LTR MaLR 5 390 0 428 231 122 26 chr2 203727638 203727794 -46960060 - L1ME4a LINE L1 -380 5741 5571 31 0 0 0 chr2 203727926 203727957 -46959897 + AT_rich Low_complexity Low_complexity 1 31 0 1977 113 0 0 chr2 203728055 203728320 -46959534 - AluSq SINE Alu -48 265 1 721 128 54 27 chr2 203728320 203728469 -46959385 + L1MB3 LINE L1 6029 6181 -2 359 179 0 0 chr2 203728518 203728585 -46959269 + L1MC1 LINE L1 5184 5250 -896 1343 177 147 34 chr2 203728597 203728862 -46958992 + AluJb SINE Alu 1 295 -7 709 230 0 0 chr2 203728907 203729033 -46958821 - FLAM_A SINE Alu -7 126 1 1665 64 17 72 chr2 203729062 203729297 -46958557 + L1PB1 LINE L1 5928 6149 -2 21 36 0 0 chr2 203729320 203729348 -46958506 + AT_rich Low_complexity Low_complexity 1 28 0 5356 143 56 26 chr2 203729358 203729425 -46958429 + L1MC1 LINE L1 5263 5327 -1006 2223 76 0 36 chr2 203729425 203729726 -46958128 + AluY SINE Alu 1 290 -21 5356 143 56 26 chr2 203729726 203730064 -46957790 + L1MC1 LINE L1 5327 5653 -680 767 187 0 43 chr2 203730064 203730203 -46957651 + FLAM_A SINE Alu 1 133 0 5356 143 56 26 chr2 203730203 203730836 -46957018 + L1MC1 LINE L1 5653 6333 0 2323 87 0 28 chr2 203730841 203731162 -46956692 + AluSx SINE Alu 1 312 0 655 309 148 20 chr2 203731300 203731759 -46956095 + L2 LINE L2 2377 2894 -420 323 190 29 153 chr2 203731859 203731996 -46955858 + L2 LINE L2 3164 3283 -30 545 139 0 0 chr2 203732039 203732118 -46955736 - AluSq SINE Alu -100 213 135 2101 95 7 20 chr2 203732129 203732434 -46955420 - AluSx SINE Alu -11 301 1 2154 92 7 0 chr2 203732497 203732781 -46955073 - AluSx SINE Alu -26 286 1 2251 103 7 0 chr2 203733550 203733850 -46954004 - AluSx SINE Alu -10 302 1 2122 108 0 16 chr2 203734252 203734559 -46953295 + AluSg SINE Alu 1 302 -8 244 211 53 18 chr2 203735091 203735148 -46952706 - Charlie8 DNA MER1_type -2333 84 26 2168 122 6 10 chr2 203735359 203735670 -46952184 - AluSx SINE Alu -2 310 1 2297 104 13 0 chr2 203735883 203736191 -46951663 - AluSp SINE Alu -1 312 1 2215 110 0 10 chr2 203736318 203736618 -46951236 - AluSc SINE Alu -12 297 1 1647 177 0 18 chr2 203736850 203737133 -46950721 + AluJo SINE Alu 15 292 -20 2196 85 0 3 chr2 203737135 203737438 -46950416 + AluY SINE Alu 1 302 0 242 209 164 0 chr2 203737446 203737513 -46950341 - LTR33 LTR ERVL -441 80 3 308 376 30 52 chr2 203738082 203738353 -46949501 + L1PBa LINE L1 243 507 -6356 245 305 52 46 chr2 203738361 203738535 -46949319 + L1PBa LINE L1 1431 1605 -5258 506 336 61 17 chr2 203738600 203738895 -46948959 + L1PBb LINE L1 712 1019 -5844 855 274 35 52 chr2 203739059 203739494 -46948360 + L1PBb LINE L1 1061 1585 -5277 * 2055 210 13 55 chr2 203739472 203740319 -46947535 + L1PB4 LINE L1 690 1600 -4603 1201 154 0 0 chr2 203740322 203740497 -46947357 - AluSg/x SINE Alu -10 302 128 1738 120 7 68 chr2 203740499 203740808 -46947046 - AluSg SINE Alu -20 290 1 1410 203 210 55 chr2 203740813 203741613 -46946241 - SATR1 Satellite Satellite -144 2826 2151 2101 82 18 14 chr2 203741613 203741894 -46945960 + AluY SINE Alu 28 309 -2 1410 203 210 55 chr2 203741894 203743261 -46944593 - SATR1 Satellite Satellite -819 2151 1 471 136 0 0 chr2 203743266 203743332 -46944522 - AluS SINE Alu -247 66 1 11954 203 24 86 chr2 203743332 203744008 -46943846 + L1PB4 LINE L1 1593 2309 -3894 2151 140 0 7 chr2 203744008 203744316 -46943538 + AluSx SINE Alu 1 306 -6 11954 203 24 86 chr2 203744316 203744365 -46943489 + L1PB4 LINE L1 2309 2359 -3844 2486 66 0 0 chr2 203744365 203744669 -46943185 + AluY SINE Alu 1 304 -7 11954 203 24 86 chr2 203744669 203745355 -46942499 + L1PB4 LINE L1 2359 3086 -3117 1642 204 0 31 chr2 203745355 203745530 -46942324 - AluJo SINE Alu -4 308 146 2410 97 0 0 chr2 203745530 203745828 -46942026 - AluSg SINE Alu -12 298 1 1642 204 0 31 chr2 203745828 203745970 -46941884 - AluJo SINE Alu -166 146 1 11954 203 24 86 chr2 203745970 203746198 -46941656 + L1PB4 LINE L1 3086 3326 -2877 2502 86 0 0 chr2 203746198 203746511 -46941343 + AluSq SINE Alu 1 313 0 11954 203 24 86 chr2 203746511 203746590 -46941264 + L1PB4 LINE L1 3326 3408 -2795 1993 143 3 0 chr2 203746590 203746876 -46940978 + AluJb SINE Alu 1 287 -25 11954 203 24 86 chr2 203746876 203747557 -46940297 + L1PB4 LINE L1 3408 4129 -2074 2115 100 4 0 chr2 203747557 203747838 -46940016 - AluSx SINE Alu -30 282 1 11954 203 24 86 chr2 203747838 203749165 -46938689 + L1PB4 LINE L1 4129 5121 -1082 243 0 0 0 chr2 203749165 203749192 -46938662 + (T)n Simple_repeat Simple_repeat 1 27 0 33 0 0 0 chr2 203749216 203749249 -46938605 + AT_rich Low_complexity Low_complexity 1 33 0 4474 42 0 4 chr2 203749249 203749755 -46938099 - SVA Other Other 0 1386 883 501 201 15 45 chr2 203749757 203749891 -46937963 + L1PB4 LINE L1 5114 5243 -960 851 161 7 14 chr2 203749892 203750035 -46937819 + AluJo SINE Alu 1 142 -170 282 217 17 0 chr2 203750587 203750647 -46937207 + GA-rich Low_complexity Low_complexity 3 63 0 726 155 0 75 chr2 203750647 203750821 -46937033 + L1PB4 LINE L1 5248 5408 -795 573 197 13 13 chr2 203750823 203750975 -46936879 + CT-rich Low_complexity Low_complexity 1 152 0 1793 154 11 11 chr2 203750991 203751277 -46936577 - AluSx SINE Alu -22 290 5 459 133 78 0 chr2 203751282 203751372 -46936482 + L1PB4 LINE L1 5401 5497 -716 726 105 0 35 chr2 203751380 203751494 -46936360 + FLAM_C SINE Alu 34 143 0 1923 216 135 8 chr2 203751510 203751991 -46935863 + L1MA5A LINE L1 5455 5996 -301 * 1969 170 72 16 chr2 203751769 203752145 -46935709 + L1PB4 LINE L1 5767 6295 -4 1654 151 0 45 chr2 203752164 203752310 -46935544 + AluJb SINE Alu 11 137 -175 4531 120 37 15 chr2 203752310 203752983 -46934871 - LTR12 LTR ERV1 0 688 1 1654 151 0 45 chr2 203752983 203753147 -46934707 + AluJb SINE Alu 137 307 -5 2012 132 6 28 chr2 203753527 203753846 -46934008 + AluSx SINE Alu 1 312 0 1160 102 17 23 chr2 203753846 203754022 -46933832 + AluSg/x SINE Alu 134 308 -4 2225 115 0 28 chr2 203755046 203755405 -46932449 - AluSx SINE Alu 0 350 1 1657 76 202 53 chr2 203755632 203755894 -46931960 + AluY SINE Alu 1 301 0 2370 65 3 35 chr2 203756177 203756487 -46931367 - AluSp SINE Alu -13 300 1 23 54 0 0 chr2 203756725 203756762 -46931092 + AT_rich Low_complexity Low_complexity 1 37 0 870 152 0 14 chr2 203756997 203757142 -46930712 - FLAM_C SINE Alu 0 143 1 2425 101 0 0 chr2 203758022 203758330 -46929524 - AluSg SINE Alu -2 308 1 2363 85 3 10 chr2 203759390 203759697 -46928157 - AluSp SINE Alu -8 305 1 633 279 67 0 chr2 203759785 203759964 -46927890 + MIR SINE MIR 71 261 -1 2679 20 0 0 chr2 203759975 203760270 -46927584 - AluY SINE Alu -16 295 1 29 0 0 0 chr2 203760270 203760299 -46927555 + AT_rich Low_complexity Low_complexity 1 29 0 312 307 107 15 chr2 203762842 203763047 -46924807 + L3b LINE CR1 1165 1388 -195 2230 90 3 10 chr2 203763105 203763406 -46924448 - AluY SINE Alu -12 299 1 21 0 0 0 chr2 203764102 203764123 -46923731 + AT_rich Low_complexity Low_complexity 1 21 0 2085 116 7 17 chr2 203764719 203765020 -46922834 - AluSg SINE Alu -12 298 1 681 231 39 2 chr2 203765073 203765269 -46922585 + MIR SINE MIR 3 204 -58 21 0 0 0 chr2 203765513 203765534 -46922320 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 203765709 203765737 -46922117 + AT_rich Low_complexity Low_complexity 1 28 0 1927 142 3 10 chr2 203768852 203769154 -46918700 - AluSx SINE Alu -12 300 1 2369 87 7 0 chr2 203769260 203769560 -46918294 - AluSp SINE Alu -11 302 1 1596 121 5 0 chr2 203769760 203769984 -46917870 + AluSx SINE Alu 1 225 -87 948 180 0 0 chr2 203769985 203770135 -46917719 - AluJo SINE Alu -162 150 1 2239 106 0 16 chr2 203770489 203770656 -46917198 - AluSq SINE Alu -15 298 130 459 0 0 0 chr2 203770656 203770707 -46917147 + (TG)n Simple_repeat Simple_repeat 2 52 0 2046 113 3 7 chr2 203770707 203770989 -46916865 - AluSg1 SINE Alu -28 281 1 2239 106 0 16 chr2 203770989 203771123 -46916731 - AluSq SINE Alu -181 132 1 365 169 14 0 chr2 203771130 203771201 -46916653 - AluSp/q SINE Alu -1 302 231 1414 65 12 0 chr2 203771201 203771369 -46916485 - AluSx SINE Alu -142 170 1 873 148 0 15 chr2 203771372 203771507 -46916347 - AluJo/FLAM SINE Alu -169 133 1 2109 119 3 22 chr2 203774176 203774494 -46913360 + AluSx SINE Alu 1 312 0 2035 127 13 17 chr2 203775881 203776018 -46911836 + AluSx SINE Alu 1 137 -175 2211 100 31 0 chr2 203776018 203776308 -46911546 + AluSg SINE Alu 1 299 -11 2035 127 13 17 chr2 203776308 203776469 -46911385 + AluSx SINE Alu 137 298 -14 2069 116 3 29 chr2 203776623 203776934 -46910920 - AluSg SINE Alu -7 303 1 259 195 156 0 chr2 203776981 203777058 -46910796 + L1ME LINE L1 5599 5687 -477 664 87 87 22 chr2 203777058 203777196 -46910658 + AluSg/x SINE Alu 159 305 -7 855 211 0 0 chr2 203777768 203777910 -46909944 - FRAM SINE Alu -37 139 1 419 219 0 0 chr2 203777917 203777990 -46909864 - AluJ/FLAM SINE Alu -238 74 2 1592 194 0 14 chr2 203778046 203778167 -46909687 + AluJo SINE Alu 1 122 -190 2367 84 0 16 chr2 203778167 203778476 -46909378 - AluY SINE Alu -7 304 1 1592 194 0 14 chr2 203778476 203778637 -46909217 + AluJo SINE Alu 122 279 -33 2626 169 20 130 chr2 203778660 203778787 -46909067 + L1ME1 LINE L1 5458 5597 -569 1776 106 8 0 chr2 203778787 203779024 -46908830 - AluSg/x SINE Alu 0 310 72 2626 169 20 130 chr2 203779024 203779687 -46908167 + L1ME1 LINE L1 5597 6161 -5 317 324 7 29 chr2 203779926 203780065 -46907789 - MER112 DNA MER1_type -17 243 108 1019 204 12 0 chr2 203780086 203780258 -46907596 - FAM SINE Alu -1 174 1 2244 119 0 3 chr2 203780467 203780762 -46907092 - AluSx SINE Alu -18 294 1 2279 103 3 0 chr2 203780762 203781063 -46906791 - AluSx SINE Alu -10 302 1 285 150 0 0 chr2 203781236 203781276 -46906578 + Alu SINE Alu 14 53 -247 * 351 200 0 0 chr2 203781263 203781323 -46906531 + AluJo/FRAM SINE Alu 208 267 -35 22 56 0 0 chr2 203781429 203781465 -46906389 + AT_rich Low_complexity Low_complexity 1 36 0 698 170 62 0 chr2 203781497 203781609 -46906245 + FLAM_C SINE Alu 2 120 -23 459 0 0 0 chr2 203781609 203781660 -46906194 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 2109 142 0 0 chr2 203781662 203781972 -46905882 + AluSg SINE Alu 1 310 0 329 242 159 8 chr2 203781983 203782115 -46905739 - L1ME4a LINE L1 -9 6112 5961 323 202 35 9 chr2 203783341 203783455 -46904399 + G-rich Low_complexity Low_complexity 3 119 0 916 242 59 111 chr2 203784278 203784417 -46903437 + HAL1 LINE L1 1148 1293 -1214 1737 201 10 0 chr2 203784417 203784726 -46903128 + AluJo SINE Alu 1 312 0 916 242 59 111 chr2 203784726 203785227 -46902627 + HAL1 LINE L1 1293 1755 -752 953 122 0 7 chr2 203785317 203785456 -46902398 - AluSg/x SINE Alu -11 301 164 624 97 86 32 chr2 203785465 203785558 -46902296 - FRAM SINE Alu -20 156 59 516 106 0 0 chr2 203786202 203786287 -46901567 + (TA)n Simple_repeat Simple_repeat 2 86 0 2295 88 3 3 chr2 203786289 203786584 -46901270 - AluSx SINE Alu -17 295 1 26 30 0 0 chr2 203786732 203786765 -46901089 + AT_rich Low_complexity Low_complexity 1 33 0 2291 103 10 0 chr2 203787346 203787647 -46900207 - AluSx SINE Alu -8 304 1 1384 204 57 14 chr2 203788038 203788318 -46899536 - AluJo SINE Alu -20 292 1 21 82 0 0 chr2 203788446 203788495 -46899359 + AT_rich Low_complexity Low_complexity 1 49 0 233 352 58 8 chr2 203788605 203788740 -46899114 + MIR SINE MIR 2 147 -65 213 255 20 0 chr2 203789738 203789789 -46898065 + CT-rich Low_complexity Low_complexity 4 55 0 22 0 0 0 chr2 203790257 203790279 -46897575 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr2 203790551 203790589 -46897265 + AT_rich Low_complexity Low_complexity 1 38 0 2321 95 0 7 chr2 203790661 203790967 -46896887 - AluSx SINE Alu -8 304 1 2004 129 0 17 chr2 203791002 203791304 -46896550 - AluSx SINE Alu -15 297 1 1967 105 17 20 chr2 203791339 203791635 -46896219 - AluSg SINE Alu -15 295 1 1219 152 35 17 chr2 203791772 203792003 -46895851 - L1MB4 LINE L1 0 6180 5946 1932 133 14 7 chr2 203792283 203792577 -46895277 + AluJo SINE Alu 5 300 -12 2494 69 7 0 chr2 203792581 203792885 -46894969 - AluSp SINE Alu -7 306 1 2752 173 45 72 chr2 203792886 203793128 -46894726 - L1M4 LINE L1 -1055 5091 4844 2487 71 0 7 chr2 203793128 203793437 -46894417 + AluY SINE Alu 1 307 -4 2752 173 45 72 chr2 203793437 203793623 -46894231 - L1M4 LINE L1 -1302 4844 4655 2216 115 3 3 chr2 203793623 203793935 -46893919 - AluSq SINE Alu -1 312 1 2752 173 45 72 chr2 203793935 203794209 -46893645 - L1M4 LINE L1 -1491 4655 4407 3287 145 69 6 chr2 203794286 203794831 -46893023 - L1MB2 LINE L1 -3 6168 5659 1584 155 36 63 chr2 203794831 203794997 -46892857 - AluJo SINE Alu -17 295 139 2334 94 0 7 chr2 203794997 203795295 -46892559 - AluSg SINE Alu -14 296 1 1584 155 36 63 chr2 203795295 203795431 -46892423 - AluJo SINE Alu -173 139 1 3287 145 69 6 chr2 203795431 203795819 -46892035 - L1MB2 LINE L1 -512 5659 5135 2032 111 3 66 chr2 203795826 203796159 -46891695 - AluSx SINE Alu 0 312 1 1349 200 33 8 chr2 203796266 203796511 -46891343 + AluJo SINE Alu 1 251 -61 438 218 113 16 chr2 203796513 203796637 -46891217 - Tigger5 DNA MER2_type -2168 155 20 308 82 0 20 chr2 203796788 203796837 -46891017 + (TTCC)n Simple_repeat Simple_repeat 1 48 0 2244 65 0 46 chr2 203796849 203797156 -46890698 + AluY SINE Alu 1 293 -18 2409 68 10 10 chr2 203797156 203797465 -46890389 + AluY SINE Alu 1 309 -2 847 127 0 0 chr2 203797477 203797595 -46890259 - FLAM_C SINE Alu -25 118 1 1284 218 37 65 chr2 203797723 203798008 -46889846 - MLT1C LTR MaLR -8 459 184 1985 135 13 3 chr2 203798008 203798312 -46889542 - AluSx SINE Alu -5 307 1 1284 218 37 65 chr2 203798312 203798380 -46889474 - MLT1C LTR MaLR -283 184 116 293 294 50 42 chr2 203798474 203798593 -46889261 - MER20B DNA MER1_type -619 164 45 1805 133 31 14 chr2 203798814 203799107 -46888747 + AluSx SINE Alu 1 298 -14 1183 171 13 34 chr2 203799211 203799450 -46888404 + AluJo SINE Alu 1 234 -78 341 229 48 12 chr2 203800226 203800309 -46887545 - MER5A DNA MER1_type -1 188 103 944 161 0 7 chr2 203800313 203800468 -46887386 - AluSx SINE Alu -150 162 9 213 269 77 26 chr2 203800543 203800621 -46887233 - L2 LINE L2 0 3313 3232 21 57 0 0 chr2 203800814 203800849 -46887005 + AT_rich Low_complexity Low_complexity 1 35 0 1454 148 108 4 chr2 203800943 203801193 -46886661 - AluJo SINE Alu -30 282 7 1419 162 22 12 chr2 203801215 203801458 -46886396 - L1MB2 LINE L1 -25 6155 5894 2287 116 0 3 chr2 203801458 203801769 -46886085 - AluSq SINE Alu -3 310 1 1419 162 22 12 chr2 203801769 203801812 -46886042 - L1MB2 LINE L1 -286 5894 5853 1268 214 0 18 chr2 203802078 203802353 -46885501 + AluY SINE Alu 39 308 -3 1049 173 0 0 chr2 203802358 203802531 -46885323 + AluY SINE Alu 130 302 -9 453 296 43 43 chr2 203802983 203803260 -46884594 + L1M4 LINE L1 3881 4157 -1989 2056 118 3 34 chr2 203803407 203803445 -46884409 - AluSx SINE Alu 0 312 274 321 26 0 0 chr2 203803445 203803483 -46884371 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2056 118 3 34 chr2 203803483 203803766 -46884088 - AluSx SINE Alu -38 274 1 1976 104 13 24 chr2 203803801 203804099 -46883755 - AluSg SINE Alu -15 295 1 1219 152 35 17 chr2 203804236 203804467 -46883387 - L1MB4 LINE L1 0 6180 5946 1932 133 14 7 chr2 203804747 203805041 -46882813 + AluJo SINE Alu 5 300 -12 2377 89 10 0 chr2 203805045 203805348 -46882506 - AluSp SINE Alu -7 306 1 1973 127 3 14 chr2 203805525 203805817 -46882037 + AluJb SINE Alu 1 289 -23 6255 73 14 26 chr2 203805827 203807512 -46880342 + SVA Other Other 9 1400 0 229 222 123 25 chr2 203807521 203807602 -46880252 + L1MC4 LINE L1 6615 6703 -1339 2209 112 0 0 chr2 203807918 203808214 -46879640 - AluSg SINE Alu -14 296 1 1965 106 92 0 chr2 203808214 203808487 -46879367 - AluSq SINE Alu -15 298 1 302 239 11 0 chr2 203808507 203808599 -46879255 + GA-rich Low_complexity Low_complexity 3 95 0 276 243 59 8 chr2 203809327 203809475 -46878379 + L1MC/D LINE L1 5743 5906 -530 2451 84 0 7 chr2 203809516 203809826 -46878028 + AluY SINE Alu 1 308 -3 2051 141 13 0 chr2 203809829 203810128 -46877726 + AluSp SINE Alu 1 303 -10 2120 103 0 0 chr2 203810464 203810736 -46877118 - AluSx SINE Alu -40 272 1 260 297 169 17 chr2 203811600 203811718 -46876136 + L2 LINE L2 3137 3272 0 1830 150 55 7 chr2 203812920 203813227 -46874627 + MER47A DNA MER2_type 1 322 -44 763 171 48 64 chr2 203813226 203813270 -46874584 - AluJb SINE Alu 0 312 269 * 2340 89 3 0 chr2 203813270 203813573 -46874281 + AluY SINE Alu 1 304 -7 763 171 48 64 chr2 203813573 203813715 -46874139 - AluJb SINE Alu -43 269 129 745 280 46 35 chr2 203813816 203814187 -46873667 + L1ME4a LINE L1 5546 5920 -201 2383 42 24 0 chr2 203814187 203814474 -46873380 - AluY SINE Alu -17 294 1 2014 138 3 13 chr2 203814650 203814948 -46872906 - AluSx SINE Alu -17 295 1 855 70 18 0 chr2 203815611 203815725 -46872129 + AluY SINE Alu 185 300 -11 2203 88 3 3 chr2 203815988 203816272 -46871582 - AluSg SINE Alu -26 284 1 1189 249 18 120 chr2 203816371 203816704 -46871150 - AluSg SINE Alu -1 299 1 912 182 6 35 chr2 203817075 203817245 -46870609 - FRAM SINE Alu 0 166 2 23 0 0 0 chr2 203817873 203817896 -46869958 + AT_rich Low_complexity Low_complexity 1 23 0 1894 112 49 31 chr2 203817896 203818183 -46869671 - AluSx SINE Alu -20 292 1 216 0 0 0 chr2 203818183 203818207 -46869647 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 241 219 126 106 chr2 203818357 203818508 -46869346 + MLT1J LTR MaLR 5 158 -353 1949 116 58 0 chr2 203818627 203818921 -46868933 + AluSx SINE Alu 1 311 -1 355 39 19 0 chr2 203818921 203818973 -46868881 + L1MA3 LINE L1 6253 6305 0 1406 98 10 39 chr2 203819167 203819370 -46868484 - AluSq SINE Alu -116 197 1 1156 180 168 0 chr2 203819373 203819617 -46868237 - AluSg SINE Alu -15 285 1 541 196 10 0 chr2 203819618 203819720 -46868134 - L1PA16 LINE L1 -15 6151 6049 1893 147 28 0 chr2 203819942 203820228 -46867626 - AluJb SINE Alu -18 294 1 3117 140 69 31 chr2 203820410 203820990 -46866864 - Tigger3(Golem) DNA MER2_type 0 3029 2428 297 75 0 0 chr2 203820991 203821031 -46866823 + (TA)n Simple_repeat Simple_repeat 2 41 0 1060 136 10 45 chr2 203821503 203821702 -46866152 + AluSg/x SINE Alu 119 310 0 2306 48 3 48 chr2 203821735 203822044 -46865810 - AluY SINE Alu -16 295 1 1787 131 4 8 chr2 203822211 203822478 -46865376 + AluSx SINE Alu 26 291 -21 299 183 17 0 chr2 203822575 203822635 -46865219 + L1M4 LINE L1 3966 4026 -2120 2807 68 33 24 chr2 203822636 203822793 -46865061 + SVA Other Other 19 782 -1218 2807 70 44 16 chr2 203822793 203823221 -46864633 + SVA Other Other 343 782 -604 208 298 0 0 chr2 203823393 203823477 -46864377 + C-rich Low_complexity Low_complexity 1 84 0 562 192 50 8 chr2 203823577 203823697 -46864157 - MLT1A1 LTR MaLR -237 128 4 2300 89 10 3 chr2 203823697 203823999 -46863855 + AluSg SINE Alu 1 304 -6 2341 103 166 203 chr2 203824042 203824854 -46863000 - pTR5 LTR ERV1 0 2438 12 1100 110 7 19 chr2 203824996 203825150 -46862704 - AluSc SINE Alu -157 152 1 2033 124 21 3 chr2 203825192 203825483 -46862371 + AluSx SINE Alu 1 296 -16 2356 80 3 3 chr2 203826190 203826478 -46861376 + AluSp SINE Alu 1 288 -25 225 0 0 0 chr2 203826578 203826603 -46861251 + (TA)n Simple_repeat Simple_repeat 1 25 0 259 111 44 0 chr2 203826612 203826657 -46861197 - AluSc SINE Alu 0 299 253 1260 167 9 21 chr2 203826657 203826890 -46860964 + AluJb SINE Alu 72 301 -11 6728 104 62 13 chr2 203826890 203827581 -46860273 - HSMAR2 DNA Mariner -234 1068 310 2467 80 0 0 chr2 203827581 203827881 -46859973 - AluSc SINE Alu -9 300 1 6728 104 62 13 chr2 203827881 203828207 -46859647 - HSMAR2 DNA Mariner -992 310 1 400 69 0 17 chr2 203828209 203828225 -46859629 + MLT2B1 LTR ERVL 464 479 -41 267 103 0 0 chr2 203828225 203828264 -46859590 + (CCTA)n Simple_repeat Simple_repeat 4 42 0 400 69 0 17 chr2 203828264 203828305 -46859549 + MLT2B1 LTR ERVL 479 520 0 292 98 66 33 chr2 203828790 203828851 -46859003 - Alu SINE Alu -237 63 1 2012 128 4 4 chr2 203828911 203829222 -46858632 - AluSx SINE Alu 0 311 1 753 136 34 0 chr2 203829315 203829433 -46858421 - AluSq/x SINE Alu -190 122 1 1465 195 7 20 chr2 203829713 203830010 -46857844 + AluJo SINE Alu 1 293 -19 1741 147 9 60 chr2 203830018 203830337 -46857517 + AluSx SINE Alu 1 303 -9 2151 138 0 0 chr2 203830337 203830635 -46857219 + AluSx SINE Alu 1 298 -14 2400 81 0 0 chr2 203830661 203830958 -46856896 + AluSg SINE Alu 1 297 -13 2221 84 18 0 chr2 203831451 203831737 -46856117 - AluSg SINE Alu -19 291 1 24 53 0 0 chr2 203831812 203831850 -46856004 + AT_rich Low_complexity Low_complexity 1 38 0 2962 169 23 14 chr2 203831875 203832442 -46855412 - L1MB7 LINE L1 0 6184 5613 2342 78 3 0 chr2 203832465 203832774 -46855080 + AluSp SINE Alu 1 310 0 959 176 50 9 chr2 203832774 203832995 -46854859 - L1MB7 LINE L1 -867 5279 5050 2040 133 82 94 chr2 203833095 203833605 -46854249 - LTR1 LTR ERV1 -281 504 1 1792 182 33 0 chr2 203834114 203834416 -46853438 + AluJb SINE Alu 1 312 0 1969 184 42 24 chr2 203834635 203835180 -46852674 + pTR5 LTR ERV1 741 1295 -1143 * 6604 115 11 34 chr2 203835161 203836216 -46851638 + HERV9 LTR ERV1 27 1057 -7342 230 306 0 0 chr2 203836417 203836489 -46851365 + G-rich Low_complexity Low_complexity 1 72 0 2129 100 10 17 chr2 203836657 203836956 -46850898 - AluSp SINE Alu -16 297 1 1493 201 48 0 chr2 203837037 203837330 -46850524 + AluJo SINE Alu 1 307 -5 2208 97 7 7 chr2 203837349 203837647 -46850207 + AluSc SINE Alu 1 298 -11 837 174 60 0 chr2 203837657 203837806 -46850048 + AluJb SINE Alu 135 292 -20 1502 181 55 11 chr2 203837817 203838088 -46849766 + AluJb SINE Alu 1 283 -29 207 0 0 0 chr2 203838094 203838117 -46849737 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2267 72 59 0 chr2 203838138 203838428 -46849426 + AluSp SINE Alu 6 312 -1 346 314 96 51 chr2 203838586 203838777 -46849077 + L1MC/D LINE L1 5315 5527 -2281 2337 110 3 0 chr2 203838777 203839087 -46848767 + AluSx SINE Alu 1 311 -1 346 314 96 51 chr2 203839087 203839207 -46848647 + L1MC/D LINE L1 5527 5640 -2168 2330 84 7 3 chr2 203839338 203839636 -46848218 - AluSp SINE Alu -14 299 1 3470 132 11 0 chr2 203839636 203840239 -46847615 - L1P4 LINE L1 -380 5786 5174 1673 194 3 3 chr2 203840312 203840606 -46847248 - AluJo SINE Alu -14 298 5 2441 77 0 3 chr2 203840633 203840932 -46846922 - AluSg SINE Alu -12 298 1 1759 181 3 16 chr2 203840970 203841280 -46846574 - AluJb SINE Alu -1 311 6 24 32 0 0 chr2 203841309 203841340 -46846514 + AT_rich Low_complexity Low_complexity 1 31 0 801 223 27 11 chr2 203841575 203841759 -46846095 - AluJ SINE Alu -10 302 116 278 172 40 61 chr2 203841889 203841988 -46845866 + (TCTCTG)n Simple_repeat Simple_repeat 5 101 0 30051 72 3 7 chr2 203842013 203845841 -46842013 - HERV9 LTR ERV1 -3455 4944 1132 2048 92 28 3 chr2 203845941 203846225 -46841629 + LTR1 LTR ERV1 495 785 0 261 128 0 0 chr2 203848388 203848435 -46839419 + (T)n Simple_repeat Simple_repeat 1 47 0 412 83 0 17 chr2 203848914 203848974 -46838880 - Alu SINE Alu -258 60 2 2223 110 13 7 chr2 203849096 203849404 -46838450 + AluSx SINE Alu 1 310 -2 35 0 0 0 chr2 203849917 203849952 -46837902 + AT_rich Low_complexity Low_complexity 1 35 0 635 205 0 0 chr2 203849958 203850075 -46837779 - AluJ SINE Alu -194 118 2 2219 128 0 0 chr2 203850290 203850595 -46837259 + AluSg SINE Alu 3 307 -3 4074 132 92 23 chr2 203850810 203851539 -46836315 + MER4E LTR ERV1 1 779 0 1943 79 20 4 chr2 203851833 203852085 -46835769 - AluY SINE Alu -54 257 2 786 126 0 24 chr2 203852463 203852590 -46835264 - FLAM_C SINE Alu -5 138 15 541 116 0 89 chr2 203852599 203852711 -46835143 + MER3 DNA MER1_type 74 128 -81 1460 216 50 20 chr2 203852728 203853071 -46834783 + MLT1A2 LTR MaLR 18 370 -4 1954 145 7 10 chr2 203853498 203853801 -46834053 + AluJb SINE Alu 1 302 -10 4517 84 29 21 chr2 203853901 203854566 -46833288 - L1MA3 LINE L1 0 6305 5636 24 53 0 0 chr2 203854570 203854608 -46833246 + AT_rich Low_complexity Low_complexity 1 38 0 313 346 0 3 chr2 203854703 203854910 -46832944 + L2 LINE L2 2715 2967 -305 284 336 115 8 chr2 203855065 203855187 -46832667 + L2 LINE L2 3179 3313 0 721 183 8 0 chr2 203855246 203855366 -46832488 - FLAM_A SINE Alu -12 121 1 1152 233 137 6 chr2 203855409 203855815 -46832039 + L1ME1 LINE L1 5652 6110 -56 2112 126 0 16 chr2 203855815 203856132 -46831722 + AluSp SINE Alu 1 312 -1 2490 82 3 0 chr2 203856358 203856661 -46831193 - AluSp SINE Alu -9 304 1 2429 174 32 56 chr2 203856885 203856931 -46830923 - MER68 LTR ERV1 -50 512 466 1936 142 0 37 chr2 203856931 203857255 -46830599 - AluSx SINE Alu 0 312 1 2429 174 32 56 chr2 203857255 203857709 -46830145 - MER68 LTR ERV1 -96 466 24 2064 95 37 0 chr2 203857709 203858035 -46829819 - AluSp SINE Alu 0 336 1 208 297 48 67 chr2 203858060 203858225 -46829629 - L2 LINE L2 -14 3299 3138 22 0 0 0 chr2 203858417 203858439 -46829415 + AT_rich Low_complexity Low_complexity 1 22 0 1412 170 63 19 chr2 203858522 203858793 -46829061 - AluJo SINE Alu -29 283 1 2303 108 3 0 chr2 203858978 203859285 -46828569 - AluSg SINE Alu -2 308 1 2124 118 3 3 chr2 203859296 203859601 -46828253 - AluSx SINE Alu -7 305 1 1586 144 52 62 chr2 203859637 203859943 -46827911 - AluJb SINE Alu -9 303 1 21 0 0 0 chr2 203860063 203860084 -46827770 + AT_rich Low_complexity Low_complexity 1 21 0 2210 116 13 0 chr2 203860432 203860733 -46827121 - AluSx SINE Alu -7 305 1 1655 235 181 31 chr2 203861017 203861170 -46826684 - L1MC3 LINE L1 0 8042 7913 243 0 0 0 chr2 203861170 203861197 -46826657 + (CA)n Simple_repeat Simple_repeat 2 28 0 1655 235 181 31 chr2 203861197 203862028 -46825826 - L1MC3 LINE L1 -129 7913 6817 1554 170 36 4 chr2 203862030 203862306 -46825548 - AluJb SINE Alu -7 305 21 878 27 20 60 chr2 203862317 203862466 -46825388 - AluYb8 SINE Alu -7 311 169 2111 75 11 0 chr2 203862568 203862836 -46825018 + AluSq SINE Alu 28 298 -15 670 209 102 67 chr2 203863000 203863225 -46824629 - L1MB8 LINE L1 -135 6043 5811 * 3176 175 22 67 chr2 203863220 203863697 -46824157 - L1MB2 LINE L1 0 6171 5735 888 198 204 45 chr2 203863697 203864031 -46823823 + MLT1B LTR MaLR 4 390 0 3176 175 22 67 chr2 203864031 203864274 -46823580 - L1MB2 LINE L1 -436 5735 5483 344 125 16 0 chr2 203864275 203864339 -46823515 + CT-rich Low_complexity Low_complexity 1 65 0 1335 130 0 0 chr2 203864339 203864531 -46823323 - AluSg/x SINE Alu -1 309 118 413 213 46 28 chr2 203864782 203864890 -46822964 - MER20 DNA MER1_type -104 115 6 24 67 0 0 chr2 203865120 203865165 -46822689 + AT_rich Low_complexity Low_complexity 1 45 0 2138 118 3 0 chr2 203865578 203865874 -46821980 - AluSp SINE Alu -16 297 1 1822 161 4 0 chr2 203865993 203866313 -46821541 - AluJb SINE Alu 0 321 1 859 88 8 0 chr2 203866314 203866439 -46821415 - L1M1 LINE L1 -696 5606 5481 623 168 9 9 chr2 203866439 203866546 -46821308 - AluJb SINE Alu -205 107 1 2253 90 10 3 chr2 203866558 203866857 -46820997 - AluY SINE Alu -10 301 1 519 172 78 28 chr2 203866902 203867082 -46820772 + AluSp SINE Alu 1 189 -124 422 218 10 40 chr2 203867222 203867323 -46820531 - AluJ/FLAM SINE Alu -214 98 1 2075 145 0 3 chr2 203869220 203869523 -46818331 - AluSx SINE Alu -10 302 1 308 229 19 29 chr2 203869921 203870026 -46817828 + L1ME LINE L1 6 109 -5961 2177 106 33 0 chr2 203870165 203870467 -46817387 + AluSq SINE Alu 1 312 -1 1261 91 0 0 chr2 203870474 203870628 -46817226 + AluSg/x SINE Alu 140 293 -17 2238 101 7 0 chr2 203870658 203870956 -46816898 + AluSq SINE Alu 6 305 -8 722 200 0 0 chr2 203871019 203871154 -46816700 + AluJo SINE Alu 1 135 -177 1617 190 40 0 chr2 203871154 203871454 -46816400 + AluJb SINE Alu 1 312 0 270 138 12 125 chr2 203872440 203872520 -46815334 + MLT1H LTR MaLR 479 549 0 556 171 0 0 chr2 203872988 203873099 -46814755 + L1M4 LINE L1 5374 5484 -694 627 174 54 13 chr2 203873252 203873401 -46814453 + L1MC1 LINE L1 6157 6311 -22 1115 286 131 17 chr2 203873421 203873896 -46813958 - MLT1E LTR MaLR -64 529 1 1733 162 3 66 chr2 203873912 203874245 -46813609 - AluJb SINE Alu 0 312 1 769 192 0 70 chr2 203874256 203874412 -46813442 - FRAM SINE Alu -37 139 1 2444 181 27 40 chr2 203874418 203874966 -46812888 + MER82 DNA MER2_type 113 653 0 198 0 0 0 chr2 203875061 203875083 -46812771 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2045 111 4 4 chr2 203875085 203875365 -46812489 - AluSg SINE Alu -30 280 1 561 308 138 0 chr2 203875632 203875856 -46811998 - MIR SINE MIR -3 259 5 1958 116 27 7 chr2 203876073 203876366 -46811488 - AluSx SINE Alu -13 299 1 2353 94 0 22 chr2 203876765 203877084 -46810770 - AluSp SINE Alu -1 312 1 378 53 0 0 chr2 203877451 203877508 -46810346 - L1MA1 LINE L1 0 6302 6246 837 79 149 0 chr2 203877539 203877653 -46810201 + AluSq/x SINE Alu 1 131 -181 324 231 17 34 chr2 203877832 203877949 -46809905 + L1ME4a LINE L1 5964 6078 -43 863 28 28 9 chr2 203878064 203878173 -46809681 + AluY SINE Alu 17 127 -184 800 258 43 5 chr2 203878376 203878585 -46809269 - MER20 DNA MER1_type -2 217 1 1762 139 49 41 chr2 203879102 203879446 -46808408 - MER7A DNA MER2_type 0 346 2 262 200 73 0 chr2 203879514 203879569 -46808285 - MIR SINE MIR -64 144 86 2234 107 0 0 chr2 203879982 203880272 -46807582 - AluSq SINE Alu -15 298 9 262 306 36 57 chr2 203880353 203880546 -46807308 - L1ME3A LINE L1 -19 6151 5963 369 175 155 10 chr2 203880603 203880706 -46807148 - L1ME3A LINE L1 -223 5947 5830 1905 136 70 0 chr2 203880994 203881280 -46806574 + AluSq SINE Alu 1 306 -7 1184 136 0 0 chr2 203881280 203881449 -46806405 + AluSg/x SINE Alu 132 300 -10 1655 202 3 3 chr2 203881764 203882046 -46805808 - AluJo SINE Alu -30 282 1 2382 100 0 0 chr2 203882046 203882356 -46805498 - AluSq SINE Alu -3 310 1 387 0 0 0 chr2 203882427 203882470 -46805384 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2067 114 7 0 chr2 203882473 203882745 -46805109 - AluSg SINE Alu -36 274 1 249 269 62 8 chr2 203882749 203882879 -46804975 - MER104 DNA Tc2 -43 137 1 284 253 40 40 chr2 203882880 203882979 -46804875 + HsTC2b DNA Tc2 121 219 -696 1023 218 50 57 chr2 203883136 203883554 -46804300 + HsTC2b DNA Tc2 260 850 -68 21 36 0 0 chr2 203883719 203883747 -46804107 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr2 203884020 203884047 -46803807 + AT_rich Low_complexity Low_complexity 1 27 0 28 48 0 0 chr2 203884108 203884150 -46803704 + AT_rich Low_complexity Low_complexity 1 42 0 33 25 0 0 chr2 203884284 203884324 -46803530 + AT_rich Low_complexity Low_complexity 1 40 0 1776 94 8 4 chr2 203884491 203884726 -46803128 + AluSg SINE Alu 1 236 -74 680 181 7 0 chr2 203884726 203884864 -46802990 + L1MC2 LINE L1 5782 5920 -424 324 261 54 0 chr2 203884968 203885060 -46802794 + L1ME LINE L1 580 676 -5394 305 325 53 13 chr2 203885274 203885367 -46802487 - L1M LINE L1 -740 5426 5323 1526 156 106 14 chr2 203885367 203885642 -46802212 - AluJb SINE Alu -12 300 1 305 325 53 13 chr2 203885642 203885699 -46802155 - L1M LINE L1 -843 5323 5270 449 328 132 15 chr2 203886033 203886125 -46801729 + L2 LINE L2 2950 3030 -283 2119 123 20 0 chr2 203886125 203886425 -46801429 - AluSx SINE Alu -6 306 1 2398 103 3 0 chr2 203886433 203886743 -46801111 - AluSp SINE Alu -2 311 1 449 328 132 15 chr2 203886743 203886967 -46800887 + L2 LINE L2 3036 3313 0 511 172 15 139 chr2 203887503 203887597 -46800257 + L1MC5 LINE L1 7621 7725 -236 2223 55 7 20 chr2 203887597 203887917 -46799937 + AluY SINE Alu 1 311 0 511 172 15 139 chr2 203887917 203888089 -46799765 + L1MC5 LINE L1 7725 7854 -107 242 284 0 0 chr2 203888360 203888427 -46799427 - L1ME LINE L1 -526 5595 5529 1738 179 0 29 chr2 203888762 203889069 -46798785 + AluJo SINE Alu 1 298 -14 347 256 40 48 chr2 203889154 203889279 -46798575 + MIR SINE MIR 20 143 -119 401 354 84 18 chr2 203889347 203889711 -46798143 + L3 LINE CR1 1042 1485 -92 1968 161 7 7 chr2 203889986 203890296 -46797558 - AluSx SINE Alu -2 310 1 1914 167 8 3 chr2 203890398 203890764 -46797090 + L1MB5 LINE L1 5431 5798 -376 1370 176 48 7 chr2 203890767 203891039 -46796815 + L1MB5 LINE L1 5892 6174 0 2042 142 3 0 chr2 203891054 203891363 -46796491 + AluSg SINE Alu 1 310 0 764 253 48 24 chr2 203891616 203891865 -46795989 - L1MC/D LINE L1 -1999 5809 5555 1665 179 28 7 chr2 203891875 203892165 -46795689 - AluJo SINE Alu -16 296 1 1945 100 68 0 chr2 203892304 203892583 -46795271 - AluSq SINE Alu -15 298 1 192 40 0 0 chr2 203893206 203893231 -46794623 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1993 122 0 27 chr2 203893234 203893529 -46794325 - AluSg SINE Alu -23 287 1 2349 119 0 0 chr2 203893554 203893864 -46793990 - AluSx SINE Alu 0 312 3 203 152 22 0 chr2 203894170 203894216 -46793638 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 180 0 0 0 chr2 203894594 203894614 -46793240 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 288 0 0 0 chr2 203894613 203894645 -46793209 + (GA)n Simple_repeat Simple_repeat 2 33 0 2104 131 0 3 chr2 203894783 203895080 -46792774 - AluSx SINE Alu -14 298 3 33 0 0 42 chr2 203895189 203895216 -46792638 + AT_rich Low_complexity Low_complexity 1 27 -19 1594 160 3 77 chr2 203895216 203895529 -46792325 + AluJo SINE Alu 1 290 -22 33 0 0 42 chr2 203895529 203895549 -46792305 + AT_rich Low_complexity Low_complexity 27 46 0 2116 86 6 10 chr2 203896384 203896697 -46791157 - L1PA13 LINE L1 -4 6159 5848 1888 132 23 18 chr2 203896697 203897382 -46790472 + L1PA13 LINE L1 5034 5822 -346 294 197 0 0 chr2 203897869 203897930 -46789924 - FAM SINE Alu -1 178 118 1152 222 40 8 chr2 203897943 203898195 -46789659 - AluJo SINE Alu -52 260 1 2311 86 14 0 chr2 203898257 203898547 -46789307 + AluSx SINE Alu 1 294 -18 324 147 11 74 chr2 203898967 203899062 -46788792 - L1PA6 LINE L1 0 6154 6066 2096 91 35 3 chr2 203899281 203899568 -46788286 - AluSg SINE Alu -12 298 3 253 164 36 18 chr2 203899619 203899674 -46788180 - L1M4 LINE L1 -2292 3854 3799 2064 118 7 7 chr2 203899742 203900064 -46787790 - AluSq SINE Alu 0 313 1 22 70 0 0 chr2 203900161 203900204 -46787650 + AT_rich Low_complexity Low_complexity 1 43 0 180 290 58 29 chr2 203900323 203900392 -46787462 + MIR3 SINE MIR 130 200 -8 2306 94 7 3 chr2 203900929 203901236 -46786618 + AluSp SINE Alu 1 308 -5 481 228 38 13 chr2 203901242 203901400 -46786454 - L1MB7 LINE L1 -16 6168 6007 21 57 0 0 chr2 203901798 203901833 -46786021 + AT_rich Low_complexity Low_complexity 1 35 0 1068 105 0 33 chr2 203901994 203902147 -46785707 - AluSx SINE Alu -20 292 145 704 141 0 0 chr2 203902147 203902246 -46785608 - AluSx SINE Alu -214 99 1 1700 187 9 0 chr2 203902295 203902616 -46785238 - MER57A LTR ERV1 -79 324 1 394 306 107 0 chr2 203902766 203903102 -46784752 + L1M4 LINE L1 5023 5394 -752 430 202 101 39 chr2 203903203 203903332 -46784522 + MLT1I LTR MaLR 260 396 -13 2195 96 45 0 chr2 203903332 203903623 -46784231 + AluSx SINE Alu 1 304 -8 1590 195 7 13 chr2 203903632 203903935 -46783919 + AluJo SINE Alu 1 301 -11 352 284 65 60 chr2 203903938 203904101 -46783753 - L2 LINE L2 -623 2691 2525 1783 151 6 32 chr2 203904101 203904413 -46783441 + AluJb SINE Alu 1 304 -8 352 284 65 60 chr2 203904413 203904450 -46783404 - L2 LINE L2 -789 2525 2490 1914 165 0 13 chr2 203904728 203905044 -46782810 + AluJb SINE Alu 1 312 0 251 276 0 45 chr2 203905279 203905427 -46782427 + CT-rich Low_complexity Low_complexity 2 144 -6 1569 189 3 29 chr2 203905427 203905739 -46782115 - AluJo SINE Alu -8 304 1 666 114 44 0 chr2 203905931 203906045 -46781809 - MER41B LTR ERV1 0 635 517 782 336 90 17 chr2 203906076 203906558 -46781296 + L2 LINE L2 2511 3025 -247 907 198 128 52 chr2 203906624 203906641 -46781213 - MLT1A2 LTR MaLR -4 370 356 2004 119 61 25 chr2 203906641 203907003 -46780851 - THE1C LTR MaLR 0 375 1 907 198 128 52 chr2 203907003 203907329 -46780525 - MLT1A2 LTR MaLR -18 356 1 2003 91 14 17 chr2 203907710 203908006 -46779848 + AluSp SINE Alu 1 295 -18 1207 112 0 0 chr2 203908006 203908167 -46779687 + AluSg/x SINE Alu 132 292 -18 2383 103 0 0 chr2 203908174 203908485 -46779369 + AluY SINE Alu 1 311 0 650 82 31 0 chr2 203908485 203908582 -46779272 - Tigger1 DNA MER2_type -519 1899 1800 2361 82 0 0 chr2 203908590 203908882 -46778972 + AluSc SINE Alu 5 296 -13 942 180 37 0 chr2 203908882 203909043 -46778811 + AluJb SINE Alu 134 300 -12 5405 97 11 26 chr2 203909043 203909813 -46778041 - Tigger1 DNA MER2_type -613 1805 1048 2264 102 3 3 chr2 203909813 203910118 -46777736 - AluSp SINE Alu -4 309 5 5405 97 11 26 chr2 203910118 203910201 -46777653 - Tigger1 DNA MER2_type -1370 1048 965 4648 135 36 17 chr2 203910206 203910278 -46777576 - Tigger1 DNA MER2_type -1590 828 759 1990 125 28 3 chr2 203910278 203910566 -46777288 + AluSx SINE Alu 1 295 -17 4648 135 36 17 chr2 203910566 203911306 -46776548 - Tigger1 DNA MER2_type -1659 759 1 1879 158 10 7 chr2 203911347 203911639 -46776215 + AluJb SINE Alu 1 293 -19 2837 211 13 28 chr2 203911730 203912364 -46775490 + MER82 DNA MER2_type 28 651 -2 23 0 0 0 chr2 203912656 203912679 -46775175 + AT_rich Low_complexity Low_complexity 1 23 0 2409 56 0 3 chr2 203912692 203912980 -46774874 + AluY SINE Alu 1 287 -24 3319 186 97 49 chr2 203913160 203913629 -46774225 - L1MC4a LINE L1 0 7808 7363 1520 190 147 11 chr2 203913629 203914066 -46773788 + LTR54B LTR ERV1 1 496 -2 3319 186 97 49 chr2 203914066 203914410 -46773444 - L1MC4a LINE L1 -445 7363 7037 22 0 0 0 chr2 203914410 203914432 -46773422 + AT_rich Low_complexity Low_complexity 1 22 0 2213 96 0 0 chr2 203914432 203914714 -46773140 + AluY SINE Alu 1 282 -29 3319 186 97 49 chr2 203914714 203915026 -46772828 - L1MC4a LINE L1 -771 7037 6741 2056 145 7 0 chr2 203915026 203915330 -46772524 + AluSx SINE Alu 1 306 -6 3319 186 97 49 chr2 203915330 203915690 -46772164 - L1MC4a LINE L1 -1067 6741 6175 785 157 0 50 chr2 203915737 203915877 -46771977 - FLAM_C SINE Alu 0 133 1 1846 161 3 7 chr2 203915961 203916246 -46771608 - AluSx SINE Alu -26 286 3 198 281 0 31 chr2 203916674 203916738 -46771116 - L2 LINE L2 -1 3271 3210 2374 54 3 13 chr2 203917180 203917478 -46770376 + AluYb8 SINE Alu 3 297 -21 206 32 32 0 chr2 203917482 203917513 -46770341 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 261 245 19 0 chr2 203917523 203917576 -46770278 - Tigger5 DNA MER2_type 0 2323 2270 752 158 15 30 chr2 203917576 203917709 -46770145 + FLAM_C SINE Alu 1 131 -2 1827 164 7 10 chr2 203917838 203918143 -46769711 + AluJb SINE Alu 1 304 -8 324 209 58 23 chr2 203918313 203918399 -46769455 + MER104 DNA Tc2 35 123 -57 21 0 0 0 chr2 203918458 203918479 -46769375 + AT_rich Low_complexity Low_complexity 1 21 0 2317 73 3 23 chr2 203918541 203918841 -46769013 + AluSp SINE Alu 1 294 -19 2341 105 0 3 chr2 203919669 203919983 -46767871 - AluSq SINE Alu 0 313 1 2337 87 10 0 chr2 203920456 203920754 -46767100 + AluSg SINE Alu 2 302 -8 294 324 83 33 chr2 203920765 203920986 -46766868 + MIR SINE MIR 34 262 0 246 310 117 7 chr2 203920997 203921142 -46766712 + MIR SINE MIR 91 251 -11 2269 95 3 7 chr2 203921253 203921570 -46766284 - AluSq SINE Alu 0 316 1 507 17 0 0 chr2 203921703 203921763 -46766091 + (TC)n Simple_repeat Simple_repeat 1 60 0 640 208 8 0 chr2 203922042 203922167 -46765687 + FLAM_C SINE Alu 1 126 -7 2354 57 11 0 chr2 203922627 203922910 -46764944 - AluSp SINE Alu -11 302 17 1764 163 3 14 chr2 203923121 203923410 -46764444 - AluSx SINE Alu -26 286 1 848 164 0 29 chr2 203923518 203923658 -46764196 + AluSq/x SINE Alu 1 136 -176 1967 117 41 54 chr2 203923658 203923974 -46763880 + AluSx SINE Alu 1 312 0 3247 187 58 27 chr2 203924554 203925189 -46762665 + MER45B DNA AcHobo 307 968 -613 2435 88 0 0 chr2 203925189 203925494 -46762360 - AluY SINE Alu -6 305 1 3247 187 58 27 chr2 203925494 203925569 -46762285 + MER45B DNA AcHobo 968 1039 -1 1626 174 36 0 chr2 203925778 203926059 -46761795 + AluJb SINE Alu 1 291 -21 925 166 36 10 chr2 203926069 203926256 -46761598 + L1PA16 LINE L1 5955 6146 -19 2374 93 0 13 chr2 203926405 203926706 -46761148 + AluSx SINE Alu 1 297 -15 2079 115 14 3 chr2 203926879 203927174 -46760680 - AluSp SINE Alu -14 299 2 2047 103 0 4 chr2 203927415 203927687 -46760167 + AluSc SINE Alu 14 284 -25 339 85 0 0 chr2 203927689 203927736 -46760118 + (GGGGA)n Simple_repeat Simple_repeat 3 49 0 1124 122 16 58 chr2 203927739 203927772 -46760082 + AluSg/x SINE Alu 111 144 -168 2363 84 3 0 chr2 203927772 203928069 -46759785 + AluSp SINE Alu 1 298 -15 1124 122 16 58 chr2 203928069 203928223 -46759631 + AluSg/x SINE Alu 144 290 -22 243 0 0 0 chr2 203928224 203928251 -46759603 + (CA)n Simple_repeat Simple_repeat 2 28 0 2404 93 3 3 chr2 203928353 203928663 -46759191 - AluSg SINE Alu 0 310 1 1637 164 3 38 chr2 203930455 203930742 -46757112 + AluJo SINE Alu 6 282 -30 1685 179 3 10 chr2 203930773 203931069 -46756785 - AluJo SINE Alu -17 295 2 779 326 48 18 chr2 203931182 203931655 -46756199 + L2 LINE L2 2584 3067 -246 2328 88 10 0 chr2 203931758 203932053 -46755801 - AluSp SINE Alu -15 298 1 593 191 99 7 chr2 203932774 203932915 -46754939 - AluSg/x SINE Alu -13 299 146 1014 73 8 0 chr2 203933015 203933139 -46754715 - AluSq/x SINE Alu -187 126 2 490 265 9 91 chr2 203933153 203933214 -46754640 - LTR16A LTR ERVL -243 207 143 2487 54 0 3 chr2 203933214 203933512 -46754342 + AluY SINE Alu 1 297 -14 490 265 9 91 chr2 203933512 203933669 -46754185 - LTR16A LTR ERVL -307 143 7 615 238 35 52 chr2 203933809 203933902 -46753952 - MLT1I LTR MaLR -240 169 79 2055 94 49 3 chr2 203933902 203934189 -46753665 + AluSg SINE Alu 1 300 -10 615 238 35 52 chr2 203934189 203934267 -46753587 - MLT1I LTR MaLR -330 79 1 2123 105 24 3 chr2 203935160 203935330 -46752524 - AluSc SINE Alu -8 301 121 198 0 0 0 chr2 203935330 203935352 -46752502 + (TTTTG)n Simple_repeat Simple_repeat 5 26 0 2123 105 24 3 chr2 203935352 203935475 -46752379 - AluSc SINE Alu -188 121 2 1604 133 84 8 chr2 203935670 203936099 -46751755 + AluSx SINE Alu 1 449 0 2438 63 3 0 chr2 203936152 203936453 -46751401 + AluY SINE Alu 1 302 -9 2336 91 0 10 chr2 203936556 203936865 -46750989 + AluSp SINE Alu 1 306 -7 306 78 6 4 chr2 203936865 203937032 -46750822 + AluSc SINE Alu 7 248 -51 1308 99 14 57 chr2 203937032 203937243 -46750611 + AluSg/x SINE Alu 85 286 -26 2175 92 16 3 chr2 203937251 203937557 -46750297 + AluY SINE Alu 1 310 -1 564 253 41 14 chr2 203937591 203937737 -46750117 - MLT1E LTR MaLR -88 505 356 1249 84 0 64 chr2 203937739 203937941 -46749913 - AluSq SINE Alu 0 313 125 356 278 0 0 chr2 203937945 203938035 -46749819 + L1MC4 LINE L1 6614 6703 -1339 261 0 0 0 chr2 203938035 203938064 -46749790 + (TA)n Simple_repeat Simple_repeat 1 29 0 2045 96 39 3 chr2 203938064 203938346 -46749508 - AluSc SINE Alu -17 292 1 2300 116 0 0 chr2 203938364 203938665 -46749189 - AluSg1 SINE Alu -8 301 1 1683 160 10 7 chr2 203938672 203938960 -46748894 - AluJb SINE Alu -23 289 1 1937 139 45 0 chr2 203939361 203939648 -46748206 + AluJo SINE Alu 1 300 -12 562 274 89 26 chr2 203939684 203939987 -46747867 + L1ME4a LINE L1 5635 5956 -165 896 74 0 0 chr2 203940011 203940119 -46747735 + AluSp/q SINE Alu 185 292 -21 2409 99 3 0 chr2 203940414 203940726 -46747128 + AluSp SINE Alu 1 313 0 1733 154 18 0 chr2 203941301 203941581 -46746273 + AluJb SINE Alu 1 285 -27 2921 134 10 85 chr2 203941807 203941857 -46745997 + MER41A LTR ERV1 1 53 -501 2324 87 0 10 chr2 203941857 203942157 -46745697 + AluSg SINE Alu 1 297 -13 2921 134 10 85 chr2 203942157 203942496 -46745358 + MER41A LTR ERV1 53 332 -222 2042 125 3 0 chr2 203942496 203942784 -46745070 + AluSx SINE Alu 1 289 -23 2921 134 10 85 chr2 203942784 203942992 -46744862 + MER41A LTR ERV1 332 554 0 1626 185 109 80 chr2 203943251 203943877 -46743977 - LTR48B LTR ERV1 0 644 1 2401 87 0 13 chr2 203944004 203944314 -46743540 - AluY SINE Alu -5 306 1 2138 103 3 20 chr2 203944908 203945210 -46742644 + AluSx SINE Alu 1 297 -15 2437 87 0 0 chr2 203945224 203945522 -46742332 + AluSc SINE Alu 1 298 -11 837 174 60 0 chr2 203945532 203945681 -46742173 + AluJb SINE Alu 135 292 -20 1580 181 52 7 chr2 203945692 203945963 -46741891 + AluJb SINE Alu 1 283 -29 207 0 0 0 chr2 203945969 203945992 -46741862 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2267 72 59 0 chr2 203946013 203946303 -46741551 + AluSp SINE Alu 6 312 -1 363 308 102 54 chr2 203946461 203946652 -46741202 + L1MC/D LINE L1 5315 5530 -2278 2302 109 3 3 chr2 203946652 203946963 -46740891 + AluSx SINE Alu 1 311 -1 363 308 102 54 chr2 203946963 203947106 -46740748 + L1MC/D LINE L1 5530 5665 -2143 2257 78 20 0 chr2 203947345 203947639 -46740215 + AluSp SINE Alu 1 300 -13 2385 93 0 0 chr2 203947738 203948038 -46739816 - AluY SINE Alu -11 300 1 1533 159 55 28 chr2 203948038 203948328 -46739526 - AluJo SINE Alu -14 298 1 2218 97 0 13 chr2 203948480 203948779 -46739075 - AluY SINE Alu -15 296 2 2380 104 0 0 chr2 203948862 203949161 -46738693 - AluSx SINE Alu -6 306 8 249 196 72 82 chr2 203949868 203949965 -46737889 + MIR SINE MIR 119 214 -48 2610 258 65 25 chr2 203950166 203950302 -46737552 - L2 LINE L2 -472 2842 2713 2379 82 0 20 chr2 203950302 203950608 -46737246 + AluSg SINE Alu 3 302 -8 2610 258 65 25 chr2 203950608 203951347 -46736507 - L2 LINE L2 -601 2713 1932 303 309 73 0 chr2 203951367 203951503 -46736351 + L1MC/D LINE L1 5678 5823 -1985 2450 83 0 0 chr2 203951620 203951921 -46735933 + AluSg SINE Alu 2 302 -8 2167 104 4 0 chr2 203952390 203952670 -46735184 + AluSp SINE Alu 1 281 -32 710 0 39 20 chr2 203952670 203952772 -46735082 + (GAAA)n Simple_repeat Simple_repeat 1 104 0 2342 101 3 0 chr2 203953087 203953393 -46734461 - AluSq SINE Alu -6 307 1 2243 98 3 10 chr2 203953419 203953581 -46734273 - AluSx SINE Alu -17 295 134 2236 102 30 0 chr2 203953581 203953884 -46733970 - AluSq SINE Alu -1 312 1 2243 98 3 10 chr2 203953884 203954018 -46733836 - AluSx SINE Alu -178 134 1 595 134 188 0 chr2 203954019 203954131 -46733723 - AluSq/x SINE Alu -177 135 3 313 252 71 39 chr2 203954310 203954437 -46733417 - MER5A DNA MER1_type 0 189 59 1069 104 0 0 chr2 203954792 203954927 -46732927 + AluSq/x SINE Alu 1 135 -177 2301 121 0 0 chr2 203954928 203955235 -46732619 + AluSg SINE Alu 4 310 0 238 222 37 49 chr2 203955911 203955992 -46731862 + MLT1G1 LTR MaLR 516 595 0 2433 97 0 0 chr2 203956012 203956320 -46731534 + AluSg SINE Alu 3 310 0 217 0 0 57 chr2 203956334 203956369 -46731485 + (CAGGC)n Simple_repeat Simple_repeat 3 35 0 2183 90 35 0 chr2 203956370 203956659 -46731195 + AluSp SINE Alu 10 308 -5 316 219 105 26 chr2 203956721 203956835 -46731019 - MER5A DNA MER1_type -60 129 7 1888 118 3 38 chr2 203957114 203957403 -46730451 + AluSg SINE Alu 1 279 -31 285 29 0 0 chr2 203957407 203957441 -46730413 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 623 306 46 0 chr2 203957888 203958084 -46729770 + MIR SINE MIR 57 261 -1 23 0 0 0 chr2 203958527 203958550 -46729304 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 203959341 203959364 -46728490 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 203960257 203960278 -46727576 + GC_rich Low_complexity Low_complexity 1 21 0 369 62 0 0 chr2 203960720 203960768 -46727086 + (CCG)n Simple_repeat Simple_repeat 2 49 0 213 260 0 0 chr2 203960994 203961044 -46726810 + C-rich Low_complexity Low_complexity 4 53 0 32 0 0 0 chr2 203961075 203961107 -46726747 + GC_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr2 203961136 203961158 -46726696 + GC_rich Low_complexity Low_complexity 1 22 0 2226 82 4 0 chr2 203962526 203962848 -46725006 - AluSx SINE Alu 0 323 1 3655 133 55 73 chr2 203963110 203963203 -46724651 + MER44D DNA MER2_type 3 96 -2391 2213 116 6 0 chr2 203963203 203963514 -46724340 - AluSp SINE Alu 0 313 1 3655 133 55 73 chr2 203963514 203963814 -46724040 + MER44D DNA MER2_type 96 400 -2087 2352 57 0 17 chr2 203963814 203964110 -46723744 + AluY SINE Alu 21 311 0 3655 133 55 73 chr2 203964110 203964198 -46723656 + MER44D DNA MER2_type 400 488 -1999 1815 115 82 11 chr2 203964198 203964477 -46723377 + AluSx SINE Alu 1 299 -13 3655 133 55 73 chr2 203964477 203964737 -46723117 + MER44D DNA MER2_type 488 605 0 391 215 97 0 chr2 203965036 203965129 -46722725 - MLT1I LTR MaLR 0 409 308 681 296 33 9 chr2 203965154 203965367 -46722487 - LTR16A LTR ERVL -2 448 231 371 98 0 0 chr2 203965593 203965644 -46722210 - Alu SINE Alu -249 51 1 1565 170 3 39 chr2 203965763 203966075 -46721779 + AluSx SINE Alu 3 303 -9 731 153 0 0 chr2 203966149 203966267 -46721587 - FLAM_C SINE Alu -4 139 22 798 173 0 0 chr2 203966155 203966288 -46721566 - AluJo/FLAM SINE Alu -169 133 1 741 185 8 0 chr2 203966366 203966496 -46721358 + L1MD3 LINE L1 6887 7017 -978 1238 167 5 5 chr2 203966496 203966711 -46721143 + MER2 DNA MER2_type 1 215 -130 578 149 56 0 chr2 203966728 203966835 -46721019 + AluY SINE Alu 7 119 -192 2280 98 7 0 chr2 203967123 203967420 -46720434 - AluSx SINE Alu -13 299 1 336 196 33 0 chr2 203967422 203967514 -46720340 - L1MC5 LINE L1 -177 7784 7690 2234 77 35 0 chr2 203967942 203968227 -46719627 - AluY SINE Alu -16 295 1 2291 63 13 13 chr2 203968626 203968929 -46718925 + AluY SINE Alu 1 303 -8 1533 205 7 10 chr2 203969127 203969415 -46718439 - AluJo SINE Alu -22 290 4 1928 127 3 44 chr2 203969490 203969805 -46718049 - AluSx SINE Alu -10 302 1 306 192 68 14 chr2 203969830 203969903 -46717951 - HsTC2 DNA Tc2 -1811 87 11 1914 102 48 34 chr2 203969978 203970271 -46717583 - AluSg SINE Alu -13 297 1 1356 179 133 4 chr2 203970314 203970577 -46717277 - AluJb SINE Alu -15 297 1 533 182 150 47 chr2 203970712 203970986 -46716868 + L1ME1 LINE L1 5814 6094 -68 330 265 41 0 chr2 203971137 203971235 -46716619 - Charlie5 DNA MER1_type -2506 106 5 1068 150 6 0 chr2 203971310 203971483 -46716371 - AluSg/x SINE Alu -2 308 135 1570 129 99 23 chr2 203971629 203971926 -46715928 + AluSg SINE Alu 1 317 0 1020 131 26 0 chr2 203971926 203972079 -46715775 + AluJb SINE Alu 134 290 -22 1514 93 25 0 chr2 203972171 203972375 -46715479 + AluSp SINE Alu 1 209 -104 2558 69 7 0 chr2 203972527 203972832 -46715022 - AluY SINE Alu 0 311 5 444 156 39 0 chr2 203972875 203972952 -46714902 - MER116 DNA Mariner 0 80 1 780 299 50 47 chr2 203972958 203973322 -46714532 - MLT1J2 LTR MaLR -53 397 33 2227 108 0 0 chr2 203973414 203973701 -46714153 - AluSx SINE Alu -25 287 1 277 303 22 11 chr2 203973752 203973841 -46714013 - MIR SINE MIR -112 150 61 646 248 0 0 chr2 203974318 203974451 -46713403 - FLAM_A SINE Alu 0 133 1 228 310 74 54 chr2 203974902 203975105 -46712749 - L1MC5 LINE L1 -53 7908 7702 2129 109 3 3 chr2 203975106 203975413 -46712441 + AluSp SINE Alu 1 307 0 628 77 12 1 chr2 203975427 203975687 -46712167 + AluSg SINE Alu 8 302 -8 338 286 54 24 chr2 203975722 203975890 -46711964 - L1MC5 LINE L1 -288 7673 7501 951 187 39 65 chr2 203975893 203976123 -46711731 - MER58A DNA MER1_type 0 224 1 35 33 0 17 chr2 203976160 203976197 -46711657 + AT_rich Low_complexity Low_complexity 1 38 -21 2583 38 0 0 chr2 203976197 203976484 -46711370 - AluY SINE Alu -24 287 1 35 33 0 17 chr2 203976484 203976506 -46711348 + AT_rich Low_complexity Low_complexity 38 59 0 1479 187 0 30 chr2 203976688 203976987 -46710867 - AluJb SINE Alu -1 311 22 1532 156 60 21 chr2 203977090 203977372 -46710482 - AluJo SINE Alu -19 293 1 2312 118 0 0 chr2 203977449 203977755 -46710099 + AluSx SINE Alu 1 306 -6 1712 156 18 4 chr2 203977768 203978044 -46709810 + AluJb SINE Alu 2 281 -31 225 211 10 173 chr2 203978079 203978183 -46709671 + MLT1F1 LTR MaLR 36 122 -445 1254 172 39 4 chr2 203978185 203978418 -46709436 + L1MD3 LINE L1 7403 7643 -352 1072 158 110 8 chr2 203978416 203978662 -46709192 + L1MC3 LINE L1 7508 7778 -7 * 2462 70 3 0 chr2 203978668 203978968 -46708886 - AluSp SINE Alu -11 302 2 2074 127 17 0 chr2 203979038 203979329 -46708525 - AluSx SINE Alu -16 296 1 202 143 29 0 chr2 203979855 203979890 -46707964 + CT-rich Low_complexity Low_complexity 1 36 0 2293 93 7 10 chr2 203980141 203980443 -46707411 - AluSq SINE Alu -12 301 1 2294 91 3 7 chr2 203980496 203980792 -46707062 - AluSx SINE Alu -17 295 1 2002 108 14 10 chr2 203980920 203981217 -46706637 - AluSq SINE Alu -15 298 1 647 306 32 28 chr2 203981399 203981776 -46706078 - L2 LINE L2 -230 3083 2702 1862 175 57 110 chr2 203981792 203982149 -46705705 - L1MC4 LINE L1 -57 7985 7611 2350 107 0 0 chr2 203982149 203982458 -46705396 - AluSc SINE Alu 0 309 1 1862 175 57 110 chr2 203982458 203982553 -46705301 - L1MC4 LINE L1 -431 7611 7513 1501 180 66 11 chr2 203982553 203982825 -46705029 - AluJb SINE Alu -25 287 1 1862 175 57 110 chr2 203982825 203982998 -46704856 - L1MC4 LINE L1 -529 7513 7392 2274 121 0 0 chr2 203983026 203983324 -46704530 + AluSx SINE Alu 1 298 -14 504 282 13 19 chr2 203983345 203983501 -46704353 - L2 LINE L2 -641 2673 2519 394 339 184 12 chr2 203983535 203984187 -46703667 + L2 LINE L2 945 1708 -1606 824 161 7 14 chr2 203984214 203984350 -46703504 + FRAM SINE Alu 18 154 -158 338 0 24 0 chr2 203984350 203984392 -46703462 + (CA)n Simple_repeat Simple_repeat 2 44 0 1877 173 0 16 chr2 203984506 203984818 -46703036 - AluJb SINE Alu -5 307 1 378 331 74 67 chr2 203984840 203985139 -46702715 + L2 LINE L2 2969 3269 -3 510 304 79 4 chr2 203985629 203985856 -46701998 + MIR SINE MIR 18 261 -1 1964 155 0 0 chr2 203986302 203986598 -46701256 - AluJo SINE Alu -16 296 1 2175 113 0 0 chr2 203986886 203987223 -46700631 + AluSx SINE Alu 1 337 0 492 178 0 10 chr2 203987227 203987328 -46700526 + L1ME4a LINE L1 5951 6050 -71 669 184 70 19 chr2 203987357 203987515 -46700339 + FRAM SINE Alu 1 162 -14 2014 148 0 7 chr2 203987521 203987826 -46700028 + AluJb SINE Alu 1 303 -9 2333 108 0 10 chr2 203987835 203988149 -46699705 + AluSx SINE Alu 1 311 -1 295 253 70 70 chr2 203988514 203988677 -46699177 + L3b LINE CR1 1109 1274 -309 2217 112 0 7 chr2 203988677 203988980 -46698874 + AluSg SINE Alu 1 301 -9 295 253 70 70 chr2 203988980 203989073 -46698781 + L3b LINE CR1 1273 1365 -218 2191 120 3 10 chr2 203989229 203989537 -46698317 + AluSx SINE Alu 1 306 -6 1377 203 100 0 chr2 203989551 203989861 -46697993 + MER58B DNA MER1_type 1 341 0 2349 85 3 3 chr2 203990966 203991261 -46696593 - AluSp SINE Alu -18 295 1 1590 167 50 3 chr2 203991289 203991571 -46696283 + AluJb SINE Alu 1 295 -17 1754 161 10 10 chr2 203991691 203991983 -46695871 - AluJb SINE Alu -8 304 13 251 224 0 0 chr2 203992072 203992121 -46695733 - L1MC/D LINE L1 -1907 5901 5853 225 94 0 0 chr2 203992187 203992219 -46695635 + (TA)n Simple_repeat Simple_repeat 1 32 0 459 279 128 5 chr2 203992231 203992450 -46695404 - L1MC/D LINE L1 -421 5700 5455 996 158 12 6 chr2 203992483 203992647 -46695207 - FRAM SINE Alu -11 165 1 2470 91 0 3 chr2 203992656 203992965 -46694889 - AluSq SINE Alu -5 308 1 223 132 19 57 chr2 203993240 203993293 -46694561 + T-rich Low_complexity Low_complexity 4 54 0 1627 166 47 11 chr2 203993543 203993821 -46694033 + AluJb SINE Alu 1 288 -24 1456 90 5 0 chr2 203993948 203994136 -46693718 + AluSp SINE Alu 115 303 -10 1846 177 0 10 chr2 203994296 203994601 -46693253 + AluJo SINE Alu 5 306 -6 464 262 47 98 chr2 203994660 203994780 -46693074 + L1ME LINE L1 5380 5505 -616 2310 106 36 20 chr2 203994780 203995138 -46692716 + THE1B LTR MaLR 1 364 0 464 262 47 98 chr2 203995138 203995468 -46692386 + L1ME LINE L1 5505 5807 -314 933 87 0 0 chr2 203995468 203995583 -46692271 - AluSg SINE Alu -195 115 1 274 244 26 26 chr2 203995606 203995684 -46692170 - L2 LINE L2 0 3313 3236 247 253 48 0 chr2 203995694 203995777 -46692077 - MLT1J2 LTR MaLR -10 440 354 317 22 44 0 chr2 203995802 203995847 -46692007 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1594 103 0 5 chr2 203995851 203996064 -46691790 - AluY SINE Alu -99 212 1 881 178 92 0 chr2 203996142 203996305 -46691549 - MER58A DNA MER1_type 0 224 47 1242 126 0 0 chr2 203996308 203996483 -46691371 + AluSg/x SINE Alu 133 307 -5 254 264 132 63 chr2 203996541 203996700 -46691154 - MLT1J2 LTR MaLR -192 258 89 2006 125 10 30 chr2 203996767 203997071 -46690783 - AluSg SINE Alu -12 298 1 2389 68 17 0 chr2 203997717 203998012 -46689842 - AluY SINE Alu -11 300 1 3136 123 24 2 chr2 203998324 203998779 -46689075 - LTR9B LTR ERV1 -179 465 1 2310 108 0 3 chr2 203998807 203999114 -46688740 + AluSx SINE Alu 1 306 -6 1118 165 49 71 chr2 203999174 203999358 -46688496 + MLT1D LTR MaLR 1 188 -317 2487 64 3 3 chr2 203999358 203999656 -46688198 + AluSp SINE Alu 1 298 -15 2248 116 0 3 chr2 203999665 203999975 -46687879 + AluSc SINE Alu 1 309 0 1118 165 49 71 chr2 203999975 204000054 -46687800 + MLT1D LTR MaLR 196 234 -271 1832 224 17 8 chr2 204000054 204000412 -46687442 - MLT1A2 LTR MaLR -2 372 12 972 195 25 20 chr2 204000410 204000610 -46687244 + MLT1D LTR MaLR 305 505 0 * 2025 217 126 42 chr2 204000618 204001136 -46686718 + MER50 LTR ERV1 10 599 -135 2007 137 0 0 chr2 204001136 204001442 -46686412 + AluSg SINE Alu 3 308 0 2025 217 126 42 chr2 204001442 204001589 -46686265 + MER50 LTR ERV1 599 732 -2 585 186 0 0 chr2 204001651 204001748 -46686106 + AluJo SINE Alu 2 98 -214 523 97 36 12 chr2 204001748 204001838 -46686016 - THE1B LTR MaLR 0 355 267 1583 51 10 0 chr2 204001839 204002035 -46685819 + L1PA5 LINE L1 5931 6128 -26 185 0 40 0 chr2 204002038 204002063 -46685791 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 1693 122 73 24 chr2 204002063 204002350 -46685504 - THE1B LTR MaLR -63 301 1 863 211 20 39 chr2 204002350 204002392 -46685462 + AluJo SINE Alu 94 135 -177 2134 119 0 3 chr2 204002392 204002700 -46685154 + AluSq SINE Alu 2 308 0 863 211 20 39 chr2 204002700 204002860 -46684994 + AluJo SINE Alu 135 293 -19 2172 107 0 0 chr2 204002957 204003263 -46684591 - AluSc SINE Alu 0 306 1 346 151 0 0 chr2 204003288 204003341 -46684513 - Alu SINE Alu -3 299 247 766 154 0 31 chr2 204003421 204003551 -46684303 - FLAM_C SINE Alu -7 126 1 25 0 0 0 chr2 204003569 204003594 -46684260 + AT_rich Low_complexity Low_complexity 1 25 0 537 92 13 0 chr2 204003594 204003670 -46684184 - AluSp/q SINE Alu -15 298 222 2345 46 3 11 chr2 204003692 204004024 -46683830 - AluY SINE Alu 0 330 1 593 125 11 0 chr2 204004101 204004189 -46683665 - AluJb SINE Alu -18 294 206 1153 158 14 37 chr2 204004210 204004425 -46683429 + AluSg/x SINE Alu 83 292 -18 354 221 43 94 chr2 204004425 204004679 -46683175 - L1MEc LINE L1 -4747 1649 1409 1145 141 28 6 chr2 204004760 204004937 -46682917 - AluJo SINE Alu -131 181 1 384 301 82 47 chr2 204004940 204005282 -46682572 - L1MEc LINE L1 -5087 1118 765 2490 75 3 0 chr2 204005355 204005662 -46682192 + AluY SINE Alu 1 308 -3 2162 102 10 0 chr2 204005998 204006292 -46681562 - AluSq SINE Alu -16 297 1 2376 90 10 3 chr2 204006299 204006609 -46681245 - AluSx SINE Alu 0 312 1 2523 78 3 0 chr2 204006754 204007063 -46680791 + AluSp SINE Alu 1 310 -3 651 194 32 8 chr2 204007744 204007868 -46679986 + FLAM_A SINE Alu 1 127 -6 329 281 111 23 chr2 204008153 204008324 -46679530 + L1ME LINE L1 5522 5707 -414 2356 93 3 0 chr2 204008652 204008953 -46678901 + AluSq SINE Alu 1 302 -11 282 237 172 0 chr2 204009307 204009400 -46678454 + MER5A DNA MER1_type 1 109 -80 1582 144 171 9 chr2 204009462 204009796 -46678058 + Tigger2a DNA MER2_type 47 434 0 773 151 8 16 chr2 204009811 204009937 -46677917 - AluJb SINE Alu -23 289 165 285 211 43 130 chr2 204010082 204010243 -46677611 + MER5A DNA MER1_type 36 182 -7 23 68 0 0 chr2 204011516 204011560 -46676294 + AT_rich Low_complexity Low_complexity 1 44 0 204 206 0 0 chr2 204012025 204012059 -46675795 + polypyrimidine Low_complexity Low_complexity 3 36 0 230 113 0 81 chr2 204012467 204012529 -46675325 + (TTC)n Simple_repeat Simple_repeat 1 57 0 364 293 153 27 chr2 204012825 204013047 -46674807 + MIR SINE MIR 13 262 0 2319 112 0 6 chr2 204013062 204013376 -46674478 + AluSx SINE Alu 1 312 0 308 283 141 78 chr2 204013430 204013812 -46674042 - L2 LINE L2 -40 3273 2868 2154 115 0 0 chr2 204013969 204014248 -46673606 + AluSg SINE Alu 1 279 -31 2299 92 13 0 chr2 204016194 204016497 -46671357 + AluSc SINE Alu 1 307 -2 361 313 0 9 chr2 204016511 204016626 -46671228 - L1ME LINE L1 -475 5646 5533 2046 73 73 7 chr2 204016809 204017081 -46670773 - AluSq SINE Alu -23 290 1 825 161 111 10 chr2 204017236 204017435 -46670419 + L1MA8 LINE L1 6070 6288 -3 23 0 0 0 chr2 204018296 204018319 -46669535 + AT_rich Low_complexity Low_complexity 1 23 0 208 344 44 0 chr2 204018319 204018409 -46669445 - L3 LINE CR1 -231 1346 1253 2427 60 0 0 chr2 204018417 204018736 -46669118 + AluY SINE Alu 1 319 0 285 200 138 25 chr2 204018867 204018947 -46668907 + MIR SINE MIR 97 185 -77 2046 104 7 27 chr2 204018949 204019246 -46668608 + AluSg SINE Alu 1 291 -19 1348 206 243 42 chr2 204020218 204020470 -46667384 + MER44D DNA MER2_type 2 202 -2285 2315 84 3 14 chr2 204020470 204020767 -46667087 - AluSg1 SINE Alu -15 294 1 1348 206 243 42 chr2 204020767 204020971 -46666883 + MER44D DNA MER2_type 202 605 0 2054 110 0 64 chr2 204021091 204021417 -46666437 - AluSq SINE Alu -8 305 1 2036 97 38 14 chr2 204021575 204021863 -46665991 + AluSx SINE Alu 1 295 -17 2004 104 0 0 chr2 204022834 204023094 -46664760 - AluSx SINE Alu -52 260 1 1600 161 0 55 chr2 204023117 204023391 -46664463 - AluJb SINE Alu -53 259 1 891 82 0 49 chr2 204023473 204023595 -46664259 - AluSp/q SINE Alu -25 288 173 381 93 0 0 chr2 204023596 204023650 -46664204 + (CA)n Simple_repeat Simple_repeat 1 54 0 306 239 11 33 chr2 204023651 204023743 -46664111 + L1MC4 LINE L1 6614 6703 -1339 * 340 173 111 12 chr2 204023663 204023744 -46664110 - L1MC4 LINE L1 -1339 6703 6615 315 219 52 21 chr2 204023764 204023860 -46663994 - L1MC4 LINE L1 -1337 6705 6607 304 264 23 0 chr2 204023782 204023869 -46663985 + L1MC4 LINE L1 6614 6702 -1340 * 2242 80 14 0 chr2 204023885 204024171 -46663683 - AluSg SINE Alu -20 290 1 885 249 89 18 chr2 204026149 204026430 -46661424 + MLT1J2 LTR MaLR 1 301 -149 444 143 0 0 chr2 204026430 204026493 -46661361 - AluSc SINE Alu -107 202 140 292 244 13 0 chr2 204026497 204026575 -46661279 + MIR3 SINE MIR 115 193 -15 813 119 0 8 chr2 204026593 204026727 -46661127 - FLAM_C SINE Alu 0 133 1 192 152 0 0 chr2 204027404 204027437 -46660417 + CT-rich Low_complexity Low_complexity 1 33 0 1543 167 98 4 chr2 204027437 204027897 -46659957 - AluJb SINE Alu 0 312 1 1073 222 23 12 chr2 204028271 204028536 -46659318 + LTR40b LTR ERVL 169 436 -29 520 246 40 0 chr2 204028712 204028838 -46659016 - L2 LINE L2 -4 3309 3179 215 30 0 30 chr2 204028856 204028889 -46658965 + (TA)n Simple_repeat Simple_repeat 1 32 0 1225 142 13 26 chr2 204028915 204029088 -46658766 - AluSg/x SINE Alu -5 305 131 261 0 0 0 chr2 204029088 204029117 -46658737 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2124 84 0 57 chr2 204029117 204029414 -46658440 - AluSc SINE Alu -29 280 1 1225 142 13 26 chr2 204029414 204029465 -46658389 - AluSg/x SINE Alu -177 133 83 2056 135 3 13 chr2 204029531 204029667 -46658187 + AluSx SINE Alu 1 137 -175 2261 108 3 19 chr2 204029667 204029983 -46657871 + AluSp SINE Alu 1 311 -2 2056 135 3 13 chr2 204029983 204030150 -46657704 + AluSx SINE Alu 137 301 -11 2299 97 0 3 chr2 204030155 204030465 -46657389 + AluSp SINE Alu 1 309 0 2578 58 0 0 chr2 204030676 204030985 -46656869 + AluY SINE Alu 1 309 -2 2129 82 29 0 chr2 204031148 204031468 -46656386 + AluY SINE Alu 1 328 0 239 338 47 27 chr2 204031487 204031635 -46656219 - L2 LINE L2 -181 3091 2941 2394 70 20 17 chr2 204031690 204031990 -46655864 + AluSc SINE Alu 1 301 -8 265 187 0 0 chr2 204032345 204032391 -46655463 - THE1B LTR MaLR 0 364 307 2619 51 0 3 chr2 204032391 204032703 -46655151 + AluY SINE Alu 1 311 0 615 130 0 0 chr2 204032733 204032825 -46655029 - MSTA LTR MaLR -336 92 1 204 266 64 43 chr2 204032897 204032991 -46654863 - MIR SINE MIR -73 135 40 1862 143 19 26 chr2 204033546 204033716 -46654138 - AluJo SINE Alu -6 306 136 216 0 0 0 chr2 204033716 204033740 -46654114 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2037 115 4 7 chr2 204033742 204034021 -46653833 - AluSc SINE Alu -31 278 1 1862 143 19 26 chr2 204034021 204034154 -46653700 - AluJo SINE Alu -177 135 2 835 191 0 24 chr2 204034207 204034375 -46653479 - FRAM SINE Alu -9 167 4 452 259 29 80 chr2 204034506 204034780 -46653074 - HAL1b LINE L1 -765 583 324 316 215 49 49 chr2 204034778 204034922 -46652932 - L1ME4a LINE L1 -6 6115 5972 * 26 82 0 0 chr2 204034932 204034993 -46652861 + AT_rich Low_complexity Low_complexity 1 61 0 465 246 16 16 chr2 204035040 204035166 -46652688 - MIR SINE MIR 0 262 137 1039 165 0 0 chr2 204035297 204035461 -46652393 - AluSg/x SINE Alu -5 307 144 2296 106 10 0 chr2 204035468 204035771 -46652083 - AluSq SINE Alu -7 306 1 345 328 0 39 chr2 204035772 204035806 -46652048 - MIR SINE MIR -112 150 116 1483 207 11 21 chr2 204035806 204036135 -46651719 + AluJb SINE Alu 1 326 0 345 328 0 39 chr2 204036135 204036225 -46651629 - MIR SINE MIR -146 116 28 1042 48 0 0 chr2 204036225 204036351 -46651503 + AluY SINE Alu 178 303 -8 1630 274 105 19 chr2 204036502 204036970 -46650884 + MLT1G1 LTR MaLR 86 593 -2 338 172 16 0 chr2 204037264 204037328 -46650526 + MIR SINE MIR 168 232 -30 2157 131 0 10 chr2 204037649 204037954 -46649900 - AluSx SINE Alu -10 302 1 4064 179 58 9 chr2 204037957 204038421 -46649433 + L1MB7 LINE L1 5329 5851 -333 2228 104 13 3 chr2 204038421 204038720 -46649134 + AluSg SINE Alu 1 302 -8 4064 179 58 9 chr2 204038720 204039063 -46648791 + L1MB7 LINE L1 5851 6176 -8 1783 68 120 49 chr2 204039278 204039575 -46648279 + AluSp SINE Alu 1 316 0 21 0 0 0 chr2 204039716 204039737 -46648117 + AT_rich Low_complexity Low_complexity 1 21 0 1601 106 173 0 chr2 204040139 204040393 -46647461 - AluSx SINE Alu -4 298 1 1985 166 0 3 chr2 204040515 204040828 -46647026 - AluJb SINE Alu 0 312 1 27 29 0 0 chr2 204040842 204040876 -46646978 + AT_rich Low_complexity Low_complexity 1 34 0 314 229 52 31 chr2 204041062 204041158 -46646696 - MIR SINE MIR -33 229 132 2050 125 30 3 chr2 204041416 204041719 -46646135 - AluSx SINE Alu -1 311 1 560 176 0 10 chr2 204041839 204041941 -46645913 - FAM SINE Alu -72 113 13 770 159 0 43 chr2 204042137 204042275 -46645579 + FLAM_C SINE Alu 1 132 -1 537 170 9 45 chr2 204042542 204042654 -46645200 + FLAM_A SINE Alu 18 125 -17 23 0 0 0 chr2 204042654 204042677 -46645177 + AT_rich Low_complexity Low_complexity 1 23 0 2062 105 36 0 chr2 204043089 204043389 -46644465 - AluSp SINE Alu 0 310 1 2049 177 43 28 chr2 204043414 204043952 -46643902 - MLT2A2 LTR ERVL 0 554 4 680 193 0 75 chr2 204043952 204044113 -46643741 - FAM SINE Alu -31 154 6 1553 156 29 31 chr2 204044113 204044240 -46643614 - L1MC/D LINE L1 -582 5602 5476 2230 96 3 13 chr2 204044240 204044542 -46643312 - AluSp SINE Alu -14 299 1 1553 156 29 31 chr2 204044542 204044698 -46643156 - L1MC/D LINE L1 -708 5476 5326 915 196 18 0 chr2 204044698 204044861 -46642993 - FRAM SINE Alu 0 166 1 1553 156 29 31 chr2 204044861 204044924 -46642930 - L1MC/D LINE L1 -858 5326 5264 1911 137 9 36 chr2 204045713 204045814 -46642040 - 7SLRNA srpRNA srpRNA 0 320 218 2236 94 3 10 chr2 204045814 204046112 -46641742 - AluSc SINE Alu -13 296 1 1911 137 9 36 chr2 204046112 204046339 -46641515 - 7SLRNA srpRNA srpRNA -102 218 1 2447 81 0 0 chr2 204046461 204046771 -46641083 - AluY SINE Alu 0 311 2 2387 91 0 22 chr2 204046772 204047091 -46640763 - AluSx SINE Alu 0 312 1 2204 97 7 0 chr2 204047527 204047816 -46640038 + AluSp SINE Alu 1 291 -22 2074 95 7 7 chr2 204047819 204048103 -46639751 + AluSg1 SINE Alu 1 284 -25 2183 92 13 7 chr2 204048250 204048554 -46639300 - AluSq SINE Alu -7 306 1 2442 164 59 35 chr2 204049796 204049839 -46638015 - L1MB4 LINE L1 -3 6177 6137 2029 118 47 14 chr2 204049839 204050135 -46637719 + AluSg SINE Alu 1 306 -4 2442 164 59 35 chr2 204050135 204050475 -46637379 - L1MB4 LINE L1 -43 6137 5775 1272 173 207 10 chr2 204050475 204050775 -46637079 - MER46B DNA MER2_type -2 234 1 2442 164 59 35 chr2 204050775 204050932 -46636922 - L1MB4 LINE L1 -405 5775 5623 2031 149 0 3 chr2 204050940 204051242 -46636612 - AluSx SINE Alu -11 301 1 2024 122 14 3 chr2 204051248 204051535 -46636319 - AluSq SINE Alu -15 298 9 2323 100 10 0 chr2 204051575 204051875 -46635979 - AluSp SINE Alu -9 304 2 1587 125 5 13 chr2 204052025 204052249 -46635605 - AluSx SINE Alu -90 222 1 2332 86 13 7 chr2 204052713 204053014 -46634840 + AluSx SINE Alu 1 303 -9 914 219 18 36 chr2 204053141 204053360 -46634494 - MER20 DNA MER1_type -4 215 1 2172 83 3 17 chr2 204053554 204053842 -46634012 - AluY SINE Alu -10 301 18 334 161 0 27 chr2 204054085 204054102 -46633752 + Alu SINE Alu 1 17 -285 1811 154 37 7 chr2 204054102 204054400 -46633454 + AluJb SINE Alu 1 307 -5 2444 75 0 0 chr2 204054401 204054694 -46633160 + AluSc SINE Alu 2 294 -15 334 161 0 27 chr2 204054694 204054747 -46633107 + Alu SINE Alu 16 48 -254 1107 110 0 0 chr2 204054748 204054921 -46632933 + AluSg/x SINE Alu 140 312 0 545 159 93 19 chr2 204054921 204055028 -46632826 + AluJb SINE Alu 134 248 -64 1335 104 0 16 chr2 204055028 204055210 -46632644 - AluY SINE Alu -132 179 1 213 304 149 30 chr2 204056246 204056414 -46631440 - L3 LINE CR1 -112 1465 1278 1258 153 31 14 chr2 204056482 204056705 -46631149 + AluJo SINE Alu 84 310 -2 1943 132 33 7 chr2 204056714 204057018 -46630836 + AluSq SINE Alu 1 312 -1 1204 128 204 0 chr2 204057142 204057368 -46630486 + AluSg SINE Alu 26 297 -13 1994 125 7 33 chr2 204057507 204057811 -46630043 + AluSx SINE Alu 1 296 -16 538 211 138 0 chr2 204057811 204057920 -46629934 - AluJo/FLAM SINE Alu -178 124 1 285 231 93 37 chr2 204058153 204058261 -46629593 - L2 LINE L2 -1 3312 3199 2039 123 14 0 chr2 204058330 204058623 -46629231 - AluSx SINE Alu -15 297 1 249 280 112 0 chr2 204058693 204058818 -46629036 + MIR SINE MIR 122 260 -2 1191 88 12 35 chr2 204060645 204060815 -46627039 - AluSg/x SINE Alu -12 298 133 2223 62 39 59 chr2 204060816 204061121 -46626733 - AluYa5 SINE Alu -12 299 1 1831 164 27 0 chr2 204061393 204061692 -46626162 + AluJb SINE Alu 1 307 -5 2175 129 3 3 chr2 204061693 204062002 -46625852 + AluSx SINE Alu 2 310 -2 419 128 308 0 chr2 204062028 204062106 -46625748 - FLAM_C SINE Alu -36 107 6 640 218 183 5 chr2 204062319 204062516 -46625338 + MIR SINE MIR 18 249 -13 22 0 0 0 chr2 204062708 204062730 -46625124 + AT_rich Low_complexity Low_complexity 1 22 0 1839 114 43 21 chr2 204062755 204063035 -46624819 - AluSg SINE Alu -24 286 1 196 245 118 29 chr2 204063241 204063343 -46624511 + MIR SINE MIR 109 219 -43 22 0 0 0 chr2 204063559 204063581 -46624273 + AT_rich Low_complexity Low_complexity 1 22 0 2063 90 43 11 chr2 204063606 204063885 -46623969 - AluSx SINE Alu -24 288 1 352 260 10 0 chr2 204063993 204064089 -46623765 + L1ME LINE L1 5535 5631 -490 2428 78 0 0 chr2 204064147 204064440 -46623414 + AluSc SINE Alu 2 294 -15 274 159 0 0 chr2 204064445 204064489 -46623365 + Alu SINE Alu 1 44 -259 1136 145 24 148 chr2 204064489 204064826 -46623028 + AluJo SINE Alu 1 295 -7 250 150 0 0 chr2 204064850 204064890 -46622964 + Alu SINE Alu 1 40 -268 1095 93 7 20 chr2 204065014 204065165 -46622689 - AluSg SINE Alu -161 149 1 1976 138 7 17 chr2 204065174 204065464 -46622390 - AluJb SINE Alu -25 287 1 2118 124 3 7 chr2 204065666 204065964 -46621890 - AluSx SINE Alu -14 298 2 2267 117 0 0 chr2 204066053 204066353 -46621501 + AluSx SINE Alu 1 300 -12 1369 171 40 29 chr2 204066362 204066637 -46621217 + MER44D DNA MER2_type 456 605 0 260 163 153 82 chr2 204067120 204067218 -46620636 - FRAM SINE Alu -47 119 21 1050 159 0 0 chr2 204067243 204067406 -46620448 - AluSg/x SINE Alu -13 299 137 1866 90 7 77 chr2 204067481 204067791 -46620063 + AluSp SINE Alu 2 289 -24 2140 85 7 10 chr2 204067969 204068263 -46619591 - AluSp SINE Alu -19 294 2 354 152 95 76 chr2 204068374 204068479 -46619375 - L1MB7 LINE L1 -28 6156 6050 416 287 278 36 chr2 204069504 204069901 -46617953 + L2 LINE L2 2233 2753 -561 2166 67 0 54 chr2 204069901 204070215 -46617639 + AluSq SINE Alu 1 297 -16 416 287 278 36 chr2 204070215 204070267 -46617587 + L2 LINE L2 2753 2791 -523 2212 84 3 3 chr2 204070928 204071226 -46616628 - AluSx SINE Alu 0 312 15 2017 115 0 0 chr2 204071813 204072119 -46615735 + AluSg SINE Alu 1 306 0 393 289 178 57 chr2 204072533 204072831 -46615023 - L2 LINE L2 -1 3271 2938 370 236 118 56 chr2 204073169 204073330 -46614524 + MIR SINE MIR 9 179 -29 266 281 52 31 chr2 204073485 204073581 -46614273 + MIR SINE MIR 90 187 -75 2434 60 0 0 chr2 204073773 204074072 -46613782 + AluY SINE Alu 1 299 -12 342 254 202 23 chr2 204074244 204074417 -46613437 + MIR SINE MIR 49 252 -10 2036 91 7 7 chr2 204074536 204074822 -46613032 - AluSq SINE Alu -23 290 5 378 242 61 0 chr2 204075091 204075190 -46612664 - L3 LINE CR1 -74 1503 1399 855 104 0 0 chr2 204075724 204075839 -46612015 + AluSq/x SINE Alu 1 115 -197 322 314 76 49 chr2 204075904 204076089 -46611765 + L2 LINE L2 3073 3262 -10 2204 76 7 0 chr2 204076092 204076381 -46611473 + AluY SINE Alu 1 291 -20 945 255 64 0 chr2 204076619 204076854 -46611000 + MIR SINE MIR 5 254 -8 2299 61 0 0 chr2 204077491 204077771 -46610083 - AluY SINE Alu -20 291 12 567 210 98 70 chr2 204077771 204077974 -46609880 + L2 LINE L2 3099 3310 -3 911 146 0 19 chr2 204078150 204078308 -46609546 - FAM SINE Alu 0 49 1 376 193 80 0 chr2 204078478 204078566 -46609288 + MLT1K LTR MaLR 338 432 -156 312 260 30 40 chr2 204078957 204079057 -46608797 - L2 LINE L2 -8 3264 3166 654 191 44 15 chr2 204079953 204080089 -46607765 - MIR SINE MIR -66 196 57 349 376 45 0 chr2 204080380 204080558 -46607296 + L2 LINE L2 2659 2844 -470 * 715 303 58 48 chr2 204080554 204080933 -46606921 - L2 LINE L2 0 3313 2931 405 331 15 8 chr2 204081116 204081246 -46606608 + L2 LINE L2 3142 3272 0 1768 167 3 13 chr2 204082319 204082624 -46605230 + AluJo SINE Alu 1 302 -10 270 263 54 16 chr2 204082677 204082863 -46604991 - L2 LINE L2 0 3313 3032 38 22 0 0 chr2 204082941 204082986 -46604868 + AT_rich Low_complexity Low_complexity 1 45 0 1996 115 4 0 chr2 204082986 204083265 -46604589 - AluSx SINE Alu -32 280 1 1873 150 3 10 chr2 204083632 204083946 -46603908 + AluSx SINE Alu 1 312 0 288 338 81 44 chr2 204086049 204086209 -46601645 + MIR3 SINE MIR 2 167 -41 591 296 97 0 chr2 204087370 204087556 -46600298 - MIR SINE MIR 0 262 59 1758 160 27 10 chr2 204087556 204087725 -46600129 - AluJb SINE Alu -7 305 127 2153 109 0 0 chr2 204087725 204088027 -46599827 - AluY SINE Alu -9 302 1 1758 160 27 10 chr2 204088027 204088157 -46599697 - AluJb SINE Alu -185 127 1 341 222 222 0 chr2 204088256 204088373 -46599481 + MIR SINE MIR 120 262 0 2321 82 3 0 chr2 204088394 204088699 -46599155 + AluSx SINE Alu 1 306 -6 403 152 65 11 chr2 204088721 204088813 -46599041 + L1MC5 LINE L1 7834 7930 -31 739 131 0 0 chr2 204089560 204089667 -46598187 - AluJb SINE Alu -204 108 2 255 227 15 45 chr2 204089676 204089742 -46598112 - L2 LINE L2 -18 3295 3232 2063 132 0 3 chr2 204090992 204091302 -46596552 + AluSx SINE Alu 1 309 -3 1040 172 91 0 chr2 204091308 204091494 -46596360 + MER20 DNA MER1_type 1 203 -16 2083 134 0 7 chr2 204091583 204091889 -46595965 + LTR8 LTR ERV1 1 304 -387 502 303 52 56 chr2 204091889 204092388 -46595466 - L1ME LINE L1 -354 5767 5271 2294 85 0 0 chr2 204094137 204094430 -46593424 - AluSg SINE Alu -17 293 1 1884 126 30 13 chr2 204095122 204095423 -46592431 - AluSx SINE Alu -6 306 1 490 252 114 38 chr2 204095706 204095869 -46591985 - MIR3 SINE MIR -31 177 4 246 388 9 17 chr2 204096587 204096703 -46591151 - MIR SINE MIR -123 139 25 2307 90 0 0 chr2 204096761 204097062 -46590792 + AluSx SINE Alu 1 301 -11 883 109 8 0 chr2 204097368 204097496 -46590358 + AluSg/x SINE Alu 144 272 -40 445 196 110 59 chr2 204097496 204097715 -46590139 + pTR5 LTR ERV1 749 978 -1460 1766 172 184 32 chr2 204097826 204098292 -46589562 + LTR12 LTR ERV1 1 537 -177 238 194 113 16 chr2 204098292 204098354 -46589500 + Alu SINE Alu 221 288 -12 269 306 15 52 chr2 204098385 204098519 -46589335 - MIR3 SINE MIR -77 131 3 2402 82 0 0 chr2 204099509 204099814 -46588040 + AluSq SINE Alu 1 305 -8 198 0 0 0 chr2 204101230 204101252 -46586602 + (TA)n Simple_repeat Simple_repeat 2 23 0 2053 85 7 30 chr2 204101252 204101547 -46586307 - AluY SINE Alu -23 288 1 802 94 0 16 chr2 204101558 204101686 -46586168 + (TA)n Simple_repeat Simple_repeat 2 127 0 1794 132 7 21 chr2 204101686 204101975 -46585879 - AluSx SINE Alu -27 285 1 452 314 172 40 chr2 204102018 204102178 -46585676 + L2 LINE L2 2629 2767 -505 2131 93 3 3 chr2 204102178 204102467 -46585387 - AluSp SINE Alu -24 289 1 452 314 172 40 chr2 204102467 204102884 -46584970 + L2 LINE L2 2767 3272 0 2143 102 0 7 chr2 204102920 204103225 -46584629 + AluSq SINE Alu 1 303 -10 1971 120 3 0 chr2 204103405 204103727 -46584127 - AluSx SINE Alu 0 323 1 764 164 7 21 chr2 204104528 204104668 -46583186 - FLAM_C SINE Alu 0 143 6 2179 107 0 0 chr2 204104842 204105140 -46582714 + AluSx SINE Alu 1 298 -14 885 144 0 98 chr2 204105219 204105413 -46582441 - AluSp SINE Alu -2 311 137 1773 155 0 19 chr2 204105790 204106100 -46581754 + AluJb SINE Alu 1 304 -8 1388 101 29 5 chr2 204106355 204106564 -46581290 + L1MB2 LINE L1 5957 6170 -1 269 293 0 13 chr2 204106572 204106647 -46581207 - L2 LINE L2 -292 2980 2907 790 263 38 5 chr2 204107491 204107677 -46580177 + MIR SINE MIR 40 231 -31 387 60 0 0 chr2 204107703 204107753 -46580101 + (CCA)n Simple_repeat Simple_repeat 1 50 0 2311 93 6 0 chr2 204108109 204108420 -46579434 + AluSq SINE Alu 1 313 0 229 290 210 0 chr2 204108704 204108804 -46579050 - MER91C DNA MER1_type -19 121 1 1806 130 10 13 chr2 204109272 204109572 -46578282 - AluSx SINE Alu -13 299 1 1990 119 3 13 chr2 204110149 204110452 -46577402 - AluSx SINE Alu -11 301 2 200 143 24 0 chr2 204110494 204110536 -46577318 + GA-rich Low_complexity Low_complexity 1 43 0 193 255 21 0 chr2 204110577 204110624 -46577230 - MIR3 SINE MIR -8 200 153 25 0 0 0 chr2 204110648 204110673 -46577181 + AT_rich Low_complexity Low_complexity 1 25 0 2202 92 0 10 chr2 204111556 204111861 -46575993 + AluSq SINE Alu 1 302 -11 285 285 74 118 chr2 204112220 204112610 -46575244 + L2 LINE L2 2809 3181 -91 320 304 146 23 chr2 204112642 204112813 -46575041 + MIR SINE MIR 34 225 -37 1201 250 83 44 chr2 204113073 204113457 -46574397 - MLT1J LTR MaLR -61 450 52 477 263 35 9 chr2 204113852 204113966 -46573888 + MIR SINE MIR 32 148 -60 1783 154 3 23 chr2 204113966 204114176 -46573678 - AluJb SINE Alu -13 299 95 2532 111 5 16 chr2 204114176 204114544 -46573310 - THE1B LTR MaLR 0 364 1 1783 154 3 23 chr2 204114544 204114638 -46573216 - AluJb SINE Alu -217 95 1 1826 106 91 0 chr2 204115069 204115344 -46572510 - AluSx SINE Alu -12 300 1 344 240 66 33 chr2 204115855 204115976 -46571878 - LTR67 LTR ERVL -337 220 96 616 243 72 0 chr2 204116465 204116617 -46571237 - MER103 DNA DNA -2 164 2 387 329 8 11 chr2 204116679 204116811 -46571043 - MIR3 SINE MIR -48 160 42 2647 194 53 18 chr2 204117138 204117684 -46570170 - MLT1F1 LTR MaLR -2 565 1 1716 148 7 14 chr2 204117753 204118050 -46569804 + AluJo SINE Alu 1 295 -17 23 0 0 0 chr2 204118593 204118616 -46569238 + AT_rich Low_complexity Low_complexity 1 23 0 616 39 13 0 chr2 204119107 204119185 -46568669 - MADE1 DNA Mariner -1 79 1 201 39 0 0 chr2 204119225 204119251 -46568603 + (CAAAC)n Simple_repeat Simple_repeat 5 30 0 207 0 0 0 chr2 204119442 204119465 -46568389 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 253 212 0 61 chr2 204119628 204119694 -46568160 - L2 LINE L2 -9 3263 3202 341 338 52 15 chr2 204120111 204120247 -46567607 - MIR3 SINE MIR -56 152 12 220 320 164 0 chr2 204121322 204121450 -46566404 - MER91A DNA MER1_type -27 169 21 2716 174 149 66 chr2 204121612 204122370 -46565484 - MER21B LTR ERV1 -38 825 5 401 291 0 26 chr2 204122463 204122614 -46565240 + (CA)n Simple_repeat Simple_repeat 2 148 0 260 298 11 11 chr2 204122675 204122769 -46565085 + (CA)n Simple_repeat Simple_repeat 2 95 0 2233 109 0 47 chr2 204122821 204123143 -46564711 - AluSg SINE Alu -3 307 1 2405 230 46 25 chr2 204125513 204126160 -46561694 + L1MC4 LINE L1 7263 7923 -119 2132 107 4 0 chr2 204126319 204126629 -46561225 - AluSx SINE Alu 0 311 1 595 292 111 0 chr2 204127167 204127383 -46560471 + MIR SINE MIR 3 242 -20 2216 97 10 13 chr2 204127652 204127952 -46559902 - AluSx SINE Alu -13 299 1 874 299 131 12 chr2 204128654 204129065 -46558789 + MLT1K LTR MaLR 67 526 -62 662 109 13 39 chr2 204129065 204129221 -46558633 + (TTCC)n Simple_repeat Simple_repeat 3 154 0 2507 174 66 25 chr2 204129520 204130037 -46557817 + MER74A LTR ERVL 21 558 0 28 0 0 0 chr2 204130048 204130076 -46557778 + AT_rich Low_complexity Low_complexity 1 28 0 750 143 64 7 chr2 204130101 204130241 -46557613 - L1ME2 LINE L1 -13 6151 6004 21 0 0 0 chr2 204131040 204131061 -46556793 + AT_rich Low_complexity Low_complexity 1 21 0 341 192 27 0 chr2 204131727 204131800 -46556054 + L1MC4a LINE L1 5827 5901 -1907 487 222 46 0 chr2 204131868 204131976 -46555878 + MIR SINE MIR 117 229 -33 285 98 0 0 chr2 204132150 204132191 -46555663 + (TG)n Simple_repeat Simple_repeat 1 41 0 210 286 57 0 chr2 204133210 204133315 -46554539 - MIR SINE MIR -88 174 64 518 242 96 6 chr2 204134234 204134391 -46553463 - MIR SINE MIR -83 179 9 1994 134 0 7 chr2 204135066 204135350 -46552504 + AluJo SINE Alu 1 282 -30 279 0 0 0 chr2 204135533 204135564 -46552290 + (CA)n Simple_repeat Simple_repeat 1 31 0 331 269 34 27 chr2 204135580 204135729 -46552125 - MIR SINE MIR -50 212 63 470 287 38 6 chr2 204135817 204135974 -46551880 + MER103 DNA DNA 4 165 -1 2342 98 3 0 chr2 204135979 204136276 -46551578 - AluSq SINE Alu -15 298 1 1974 157 3 3 chr2 204136464 204136770 -46551084 + AluSx SINE Alu 1 306 -6 224 243 28 65 chr2 204137144 204137251 -46550603 + MIR SINE MIR 103 205 -57 2223 110 0 0 chr2 204138268 204138550 -46549304 - AluSx SINE Alu -30 282 1 231 286 57 50 chr2 204138872 204139012 -46548842 - MIR SINE MIR -75 187 47 453 220 113 27 chr2 204139225 204139375 -46548479 - MIR SINE MIR -4 258 96 1972 155 3 19 chr2 204139533 204139850 -46548004 + AluJb SINE Alu 1 312 0 189 107 0 0 chr2 204139853 204139881 -46547973 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1988 139 3 3 chr2 204140064 204140351 -46547503 - AluJo SINE Alu -25 287 1 352 286 25 8 chr2 204140599 204140718 -46547136 - MIR SINE MIR -110 152 32 189 0 0 0 chr2 204146653 204146674 -46541180 + (T)n Simple_repeat Simple_repeat 1 21 0 1469 153 112 19 chr2 204147999 204148267 -46539587 + AluSx SINE Alu 1 293 -19 211 240 0 20 chr2 204149075 204149125 -46538729 - L2 LINE L2 -9 3304 3256 336 242 32 0 chr2 204149794 204149889 -46537965 - MIR SINE MIR -57 205 108 230 232 147 21 chr2 204150582 204150677 -46537177 - MIR SINE MIR -23 239 133 241 135 39 0 chr2 204151465 204151517 -46536337 + (TG)n Simple_repeat Simple_repeat 2 55 0 23 0 0 0 chr2 204152525 204152548 -46535306 + AT_rich Low_complexity Low_complexity 1 23 0 607 206 18 67 chr2 204153080 204153245 -46534609 - MIR SINE MIR -31 231 75 280 353 20 13 chr2 204154335 204154485 -46533369 + L2 LINE L2 2592 2742 -572 220 326 0 0 chr2 204154915 204154961 -46532893 + L2 LINE L2 3204 3249 -23 1925 184 47 49 chr2 204154972 204155128 -46532726 + MLT1C LTR MaLR 17 172 -295 2154 104 11 0 chr2 204155128 204155441 -46532413 + AluSx SINE Alu 1 316 0 1925 184 47 49 chr2 204155441 204155735 -46532119 + MLT1C LTR MaLR 172 467 0 651 181 69 0 chr2 204155840 204155984 -46531870 + FRAM SINE Alu 21 174 -2 517 171 17 8 chr2 204155989 204156106 -46531748 + GA-rich Low_complexity Low_complexity 1 118 0 885 185 52 0 chr2 204156354 204156527 -46531327 - MER3 DNA MER1_type -27 182 1 521 133 12 0 chr2 204158130 204158213 -46529641 - MER53 DNA DNA 0 189 106 478 240 31 57 chr2 204158483 204158635 -46529219 + MIR3 SINE MIR 20 170 -38 410 266 8 55 chr2 204159782 204159910 -46527944 - MER117 DNA MER1_type -1 196 75 1084 196 34 26 chr2 204159920 204160186 -46527668 - L1ME2 LINE L1 -1 6163 5896 456 163 11 43 chr2 204160583 204160675 -46527179 - MLT1L LTR MaLR -53 562 474 251 281 124 43 chr2 204160858 204161068 -46526786 + MIR SINE MIR 20 246 -16 223 98 98 59 chr2 204161037 204161088 -46526766 + L2 LINE L2 3261 3313 0 * 1119 179 162 40 chr2 204161635 204161937 -46525917 + MER2 DNA MER2_type 2 340 -5 727 290 66 39 chr2 204161941 204162305 -46525549 + MLT1L LTR MaLR 72 553 -62 1267 172 9 31 chr2 204162305 204162320 -46525534 - MER58A DNA MER1_type -2196 224 210 2096 137 7 3 chr2 204162320 204162626 -46525228 - AluSx SINE Alu -5 307 1 1267 172 9 31 chr2 204162626 204162837 -46525017 - MER58A DNA MER1_type -2210 210 3 727 290 66 39 chr2 204162837 204162889 -46524965 + MLT1L LTR MaLR 553 602 -13 247 297 0 0 chr2 204163382 204163446 -46524408 - L2 LINE L2 0 3313 3250 2351 104 3 0 chr2 204163658 204163967 -46523887 - AluSg SINE Alu 0 310 1 2191 154 49 62 chr2 204164125 204164637 -46523217 - MLT1D LTR MaLR 0 505 1 239 310 64 43 chr2 204164831 204165018 -46522836 + L1ME4a LINE L1 5869 6059 -62 239 232 0 43 chr2 204165872 204165941 -46521913 + L2 LINE L2 2996 3061 -211 297 183 50 0 chr2 204166123 204166183 -46521671 - L2 LINE L2 -6 3307 3245 343 253 0 23 chr2 204166851 204166938 -46520916 + MIR SINE MIR 36 120 -142 429 251 0 93 chr2 204166938 204167241 -46520613 + L1M4 LINE L1 4896 5163 -983 224 398 35 0 chr2 204168747 204168948 -46518906 + L2 LINE L2 2897 3104 -168 706 286 86 9 chr2 204169084 204169304 -46518550 + MIR SINE MIR 1 237 -25 392 333 126 63 chr2 204169555 204169901 -46517953 + L2 LINE L2 2617 2940 -332 557 103 0 0 chr2 204169901 204169979 -46517875 - MLT1B LTR MaLR -2 388 311 1993 113 66 48 chr2 204169903 204170282 -46517572 - MLT1B LTR MaLR -4 386 1 392 333 126 63 chr2 204170282 204170550 -46517304 + L2 LINE L2 3243 3271 -1 344 270 224 25 chr2 204170559 204170755 -46517099 + MIR SINE MIR 20 254 -8 402 219 250 12 chr2 204170786 204170950 -46516904 + MIR SINE MIR 60 262 0 1058 181 224 0 chr2 204171244 204171481 -46516373 - AluJo SINE Alu -11 291 2 193 276 69 46 chr2 204171886 204171973 -46515881 + MIR SINE MIR 166 254 -8 2153 111 3 0 chr2 204171973 204172147 -46515707 - AluSp SINE Alu -6 307 130 1659 67 19 0 chr2 204172147 204172357 -46515497 - AluSg/x SINE Alu -15 297 84 2153 111 3 0 chr2 204172357 204172488 -46515366 - AluSp SINE Alu -183 130 1 2480 73 0 0 chr2 204172630 204172930 -46514924 + AluSc SINE Alu 1 300 -9 25 75 0 0 chr2 204174279 204174332 -46513522 + GC_rich Low_complexity Low_complexity 1 53 0 21 36 0 0 chr2 204174718 204174746 -46513108 + GC_rich Low_complexity Low_complexity 1 28 0 359 167 0 0 chr2 204175016 204175076 -46512778 + L2 LINE L2 3213 3272 0 262 298 106 0 chr2 204175869 204175973 -46511881 + L2 LINE L2 3152 3266 -6 348 225 63 49 chr2 204176038 204176180 -46511674 - L1ME LINE L1 -460 5661 5518 1625 204 35 0 chr2 204177927 204178211 -46509643 + AluJb SINE Alu 1 294 -18 977 197 75 33 chr2 204178552 204178765 -46509089 - MER58A DNA MER1_type -1 223 2 254 364 30 0 chr2 204178802 204178901 -46508953 - MIR3 SINE MIR -17 191 90 2247 159 63 7 chr2 204179296 204179710 -46508144 - MER68 LTR ERV1 -125 437 1 2177 114 0 14 chr2 204180241 204180538 -46507316 + AluSx SINE Alu 9 301 -11 912 144 0 0 chr2 204181375 204181500 -46506354 + FLAM_C SINE Alu 1 125 -8 418 319 152 44 chr2 204181778 204182260 -46505594 + L2 LINE L2 2224 2757 -557 6062 116 26 44 chr2 204182745 204183682 -46504172 - L1MA3 LINE L1 -9 6296 5374 1327 230 64 0 chr2 204183682 204183965 -46503889 - AluJo SINE Alu -9 303 3 6062 116 26 44 chr2 204183965 204184642 -46503212 - L1MA3 LINE L1 -931 5374 4686 * 20870 125 44 22 chr2 204184639 204185553 -46502301 - L1 LINE L1 -3741 3824 2932 2168 107 17 3 chr2 204185553 204185844 -46502010 + AluSg SINE Alu 3 297 -13 20870 125 44 22 chr2 204185844 204188658 -46499196 - L1 LINE L1 -4633 2932 13 249 347 11 21 chr2 204189242 204189337 -46498517 - L3 LINE CR1 -2 1575 1482 918 301 163 50 chr2 204189971 204190568 -46497286 - L3 LINE CR1 -168 1409 746 285 29 0 0 chr2 204190570 204190604 -46497250 + (T)n Simple_repeat Simple_repeat 1 34 0 481 345 84 13 chr2 204190733 204190959 -46496895 - L3 LINE CR1 -1174 403 162 198 289 44 100 chr2 204193034 204193124 -46494730 - L2 LINE L2 -15 3257 3173 313 265 86 8 chr2 204193302 204193419 -46494435 - LTR67 LTR ERVL -6 551 426 194 260 385 10 chr2 204194032 204194128 -46493726 - MIR SINE MIR -118 144 13 333 346 19 38 chr2 204194210 204194369 -46493485 + MER5B DNA MER1_type 28 172 -6 2037 209 69 14 chr2 204194582 204195088 -46492766 + L1ME1 LINE L1 5471 6004 -162 295 182 0 0 chr2 204195084 204195139 -46492715 - L1ME LINE L1 -356 5810 5756 * 577 213 96 0 chr2 204195118 204195297 -46492557 - L1ME LINE L1 -694 5472 5300 353 255 0 0 chr2 204195318 204195416 -46492438 - L1ME LINE L1 -931 5215 5118 1142 165 109 97 chr2 204195597 204195937 -46491917 - MER2 DNA MER2_type 0 344 1 2586 49 0 0 chr2 204196381 204196685 -46491169 - AluY SINE Alu -7 304 1 332 208 50 33 chr2 204196693 204196813 -46491041 + L1ME4a LINE L1 5929 6050 -71 574 300 91 14 chr2 204196834 204197054 -46490800 + MIR SINE MIR 6 242 -20 414 314 16 78 chr2 204197517 204197775 -46490079 + L2 LINE L2 3027 3268 -4 23 0 0 0 chr2 204197838 204197861 -46489993 + AT_rich Low_complexity Low_complexity 1 23 0 232 231 264 0 chr2 204198407 204198498 -46489356 - L2 LINE L2 -5 3267 3153 2280 109 0 22 chr2 204199188 204199499 -46488355 + AluSx SINE Alu 1 304 -8 2540 64 0 13 chr2 204199548 204199859 -46487995 - AluY SINE Alu -4 307 1 2332 97 3 0 chr2 204201287 204201585 -46486269 + AluSx SINE Alu 1 299 -13 193 311 0 0 chr2 204201585 204201630 -46486224 + MIR SINE MIR 40 84 -124 252 286 154 0 chr2 204203800 204203891 -46483963 + HERVL LTR ERVL 5183 5287 -367 1137 224 84 53 chr2 204204176 204204555 -46483299 - MLT2B1 LTR ERVL -41 479 89 1883 206 40 72 chr2 204204556 204204619 -46483235 + MLT2B3 LTR ERVL 1 64 -490 1779 130 73 6 chr2 204204619 204204935 -46482919 - MER1B DNA MER1_type 0 337 1 1883 206 40 72 chr2 204204935 204205443 -46482411 + MLT2B3 LTR ERVL 64 554 0 394 124 9 133 chr2 204205443 204205474 -46482380 - MLT2B1 LTR ERVL -423 92 59 1947 92 62 0 chr2 204205474 204205734 -46482120 - AluSg SINE Alu -16 294 19 394 124 9 133 chr2 204205734 204205806 -46482048 - MLT2B1 LTR ERVL -456 59 2 233 167 83 0 chr2 204205834 204205882 -46481972 + MER96 DNA MER1_type? 103 154 -21 1875 214 28 32 chr2 204205886 204206385 -46481469 - MLT1D LTR MaLR -8 497 1 790 246 21 76 chr2 204206414 204206526 -46481328 + LTR16B LTR ERVL 152 269 -195 6609 13 3 0 chr2 204206526 204207278 -46480576 + L1PA2 LINE L1 5402 6155 0 790 246 21 76 chr2 204207278 204207445 -46480409 + LTR16B LTR ERVL 269 413 -51 1608 174 240 7 chr2 204207445 204207854 -46480000 - MLT1D LTR MaLR -1 504 1 790 246 21 76 chr2 204207854 204207902 -46479952 + LTR16B LTR ERVL 413 462 -2 230 339 139 56 chr2 204207915 204208095 -46479759 + L2 LINE L2 3070 3264 -8 513 260 126 43 chr2 204208291 204208712 -46479142 + LTR33A LTR ERVL 1 519 -4 673 180 8 16 chr2 204209201 204209323 -46478531 + FLAM_A SINE Alu 1 121 -12 1412 147 44 0 chr2 204209440 204209665 -46478189 - AluJb SINE Alu -77 235 1 2252 108 3 0 chr2 204212355 204212652 -46475202 - AluSx SINE Alu -14 298 1 353 205 9 134 chr2 204212972 204213084 -46474770 + MER91A DNA MER1_type 64 161 -35 2430 73 0 0 chr2 204213217 204213518 -46474336 - AluY SINE Alu -10 301 1 30 45 0 0 chr2 204217393 204217437 -46470417 + AT_rich Low_complexity Low_complexity 1 44 0 301 302 56 0 chr2 204218196 204218322 -46469532 - MER5B DNA MER1_type -45 133 1 2250 120 0 0 chr2 204218829 204219138 -46468716 - AluSx SINE Alu -3 309 1 357 275 176 7 chr2 204219236 204219378 -46468476 - MIR3 SINE MIR 0 208 43 308 339 31 46 chr2 204220286 204220481 -46467373 + HAL1 LINE L1 6 197 -2310 2272 200 19 72 chr2 204220571 204221156 -46466698 - MLT2B3 LTR ERVL 0 554 1 481 293 56 68 chr2 204221781 204222047 -46465807 + L2 LINE L2 2283 2545 -769 1856 154 7 3 chr2 204222049 204222335 -46465519 + AluJb SINE Alu 3 289 -23 200 95 48 16 chr2 204222336 204222399 -46465455 + (TA)n Simple_repeat Simple_repeat 2 66 0 236 308 84 0 chr2 204222400 204222507 -46465347 + L2 LINE L2 2533 2648 -666 506 248 67 141 chr2 204222507 204222728 -46465126 + MLT1J LTR MaLR 1 178 -333 2332 113 0 0 chr2 204222728 204223038 -46464816 + AluY SINE Alu 1 310 -1 506 248 67 141 chr2 204223038 204223235 -46464619 + MLT1J LTR MaLR 178 388 -123 2091 222 40 48 chr2 204223351 204223612 -46464242 + L1 LINE L1 2767 3029 -3117 2446 85 13 0 chr2 204223612 204223919 -46463935 + AluSp SINE Alu 1 311 -2 2091 222 40 48 chr2 204223919 204224386 -46463468 + L1 LINE L1 3029 3489 -2657 1241 279 95 33 chr2 204224689 204224787 -46463067 - L1MEc LINE L1 -4785 1611 1521 2369 97 0 0 chr2 204224787 204225087 -46462767 + AluSg SINE Alu 1 300 -10 1241 279 95 33 chr2 204225087 204225745 -46462109 - L1MEc LINE L1 -4875 1521 808 610 217 0 0 chr2 204225752 204225872 -46461982 - FLAM_A SINE Alu -7 135 16 1730 156 14 18 chr2 204225910 204226193 -46461661 - AluJo SINE Alu -30 282 1 1283 289 86 38 chr2 204226193 204226799 -46461055 - L1MEc LINE L1 -5569 827 193 4867 153 23 4 chr2 204226805 204227581 -46460273 - MER54B LTR ERVL 0 793 3 1953 125 66 0 chr2 204227589 204227876 -46459978 - AluSx SINE Alu -6 306 1 2187 209 27 2 chr2 204227939 204228116 -46459738 + L1MD3 LINE L1 7497 7668 -327 185 0 40 0 chr2 204228116 204228141 -46459713 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2187 209 27 2 chr2 204228141 204228450 -46459404 + L1MD3 LINE L1 7668 7995 0 2393 50 0 0 chr2 204228481 204228791 -46459063 + AluY SINE Alu 1 310 0 299 265 162 52 chr2 204228897 204229042 -46458812 + L1 LINE L1 3791 3919 -2227 2125 124 0 0 chr2 204229042 204229348 -46458506 - AluY SINE Alu -5 306 1 299 265 162 52 chr2 204229348 204230123 -46457731 + L1 LINE L1 3919 4815 -1331 1900 153 137 8 chr2 204230173 204230552 -46457302 - MSTA LTR MaLR 0 428 1 877 126 1 8 chr2 204230934 204231092 -46456762 - L1MB2 LINE L1 -2 6169 6029 564 202 0 40 chr2 204231092 204231216 -46456638 + FRAM SINE Alu 1 118 -58 3527 146 50 24 chr2 204231216 204231995 -46455859 - L1MB2 LINE L1 -252 5919 5127 184 274 39 0 chr2 204232288 204232339 -46455515 - L2 LINE L2 -6 3307 3255 23 33 0 0 chr2 204232412 204232442 -46455412 + AT_rich Low_complexity Low_complexity 1 30 0 326 263 263 0 chr2 204232493 204232653 -46455201 - MLT1K LTR MaLR -62 526 325 2038 123 20 0 chr2 204232674 204232967 -46454887 + AluSx SINE Alu 12 310 -2 24 0 0 0 chr2 204232982 204233006 -46454848 + AT_rich Low_complexity Low_complexity 1 24 0 241 245 123 31 chr2 204233119 204233282 -46454572 + L1 LINE L1 4881 5058 -1088 527 300 147 9 chr2 204233435 204233782 -46454072 + L1ME2 LINE L1 5258 5652 -2156 390 333 82 13 chr2 204233849 204234008 -46453846 - MIR SINE MIR -89 173 4 252 0 0 0 chr2 204234341 204234369 -46453485 + (A)n Simple_repeat Simple_repeat 1 28 0 3487 132 42 17 chr2 204234709 204235352 -46452502 - L1MD1 LINE L1 0 6242 5584 1739 43 0 0 chr2 204235377 204235587 -46452267 + L1PA3 LINE L1 5943 6152 -3 22 35 0 0 chr2 204235587 204235616 -46452238 + AT_rich Low_complexity Low_complexity 1 29 0 4120 114 21 0 chr2 204235616 204236297 -46451557 + L1PA16 LINE L1 5175 5866 -300 943 224 118 6 chr2 204236294 204236642 -46451212 + L1M4 LINE L1 2714 3100 -3046 * 1402 240 72 15 chr2 204236626 204237084 -46450770 + L1M4 LINE L1 3562 4045 -2101 429 226 0 11 chr2 204237082 204237175 -46450679 + L1ME2 LINE L1 6029 6120 -44 * 1097 315 15 21 chr2 204237209 204237549 -46450305 - HERVL40 LTR ERVL -2371 3159 2822 1028 236 82 38 chr2 204237555 204237718 -46450136 - HERVL40 LTR ERVL -3093 2437 2254 1843 102 0 0 chr2 204237718 204237963 -46449891 - AluSg/x SINE Alu 0 312 68 1028 236 82 38 chr2 204237963 204238091 -46449763 - HERVL40 LTR ERVL -3276 2254 2133 276 200 0 0 chr2 204238166 204238210 -46449644 + MER7A DNA MER2_type 2 45 -303 318 137 0 0 chr2 204238210 204238261 -46449593 + MSTA LTR MaLR 1 51 -377 328 172 17 0 chr2 204238263 204238321 -46449533 - HERVL40 LTR ERVL -3416 2114 2056 327 181 11 53 chr2 204238318 204238412 -46449442 - HERVL40 LTR ERVL -3922 1608 1519 * 1856 168 48 18 chr2 204238451 204238743 -46449111 - MER7A DNA MER2_type -2695 343 40 1646 138 93 37 chr2 204238743 204239098 -46448756 - THE1C LTR MaLR 0 375 1 1856 168 48 18 chr2 204239098 204239139 -46448715 - MER7A DNA MER2_type -2998 40 2 314 272 43 11 chr2 204239140 204239232 -46448622 - HERVL40 LTR ERVL -4046 1484 1390 493 257 89 86 chr2 204239679 204239971 -46447883 - HERVL40 LTR ERVL -5237 293 1 630 221 53 0 chr2 204239972 204240103 -46447751 - LTR40a LTR ERVL 0 519 382 4925 260 82 41 chr2 204240103 204241655 -46446199 - HERVL40 LTR ERVL -2537 2993 1378 3624 127 45 3 chr2 204241680 204242309 -46445545 + L1MA7 LINE L1 1355 2009 -4780 6087 174 237 30 chr2 204242312 204243101 -46444753 + L1MA7 LINE L1 2767 3391 -3397 2030 144 13 3 chr2 204243101 204243406 -46444448 + AluSx SINE Alu 1 308 -4 6087 174 237 30 chr2 204243406 204243728 -46444126 + L1MA7 LINE L1 3391 3645 -3143 1631 128 158 83 chr2 204243728 204244126 -46443728 - MSTA LTR MaLR 0 428 1 6087 174 237 30 chr2 204244126 204244834 -46443020 + L1MA7 LINE L1 3645 4964 -1824 16330 215 26 19 chr2 204244847 204248732 -46439122 + L1PA15 LINE L1 1 4434 -2382 2203 113 3 0 chr2 204248732 204249025 -46438829 + AluSx SINE Alu 1 294 -18 16330 215 26 19 chr2 204249025 204251426 -46436428 + L1PA15 LINE L1 4434 6816 0 5156 164 21 11 chr2 204251407 204252938 -46434916 + L1MA7 LINE L1 4930 6476 -457 * 2505 58 3 10 chr2 204253441 204253754 -46434100 - AluY SINE Alu 0 311 1 1379 277 77 134 chr2 204253907 204255376 -46432478 - L2 LINE L2 -66 3247 1862 325 271 139 84 chr2 204255926 204256199 -46431655 + MLT1H1-int LTR MaLR 1059 1712 -23 474 242 108 71 chr2 204256212 204256452 -46431402 + MLT1H1 LTR MaLR 6 254 -288 432 0 0 0 chr2 204256536 204256584 -46431270 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 690 237 104 29 chr2 204256640 204256886 -46430968 + MLT1H1 LTR MaLR 230 548 -7 329 283 29 51 chr2 204256986 204257124 -46430730 + L1ME4a LINE L1 5258 5392 -729 310 214 0 0 chr2 204257150 204257206 -46430648 + L1ME4a LINE L1 5524 5579 -542 392 231 206 12 chr2 204257286 204257607 -46430247 + L1ME4a LINE L1 5737 6119 -2 254 389 94 7 chr2 204257672 204257821 -46430033 - MIR3 SINE MIR -28 180 19 23 54 0 0 chr2 204258253 204258290 -46429564 + AT_rich Low_complexity Low_complexity 1 37 0 2178 129 52 0 chr2 204260513 204260877 -46426977 - L1MB1 LINE L1 0 6168 5786 1773 138 0 0 chr2 204260889 204261157 -46426697 + Tigger1 DNA MER2_type 26 293 -2125 6386 72 20 1 chr2 204261169 204262031 -46425823 - L1PA12 LINE L1 -4 6164 5287 315 91 11 125 chr2 204262031 204262119 -46425735 - L1PA12 LINE L1 -835 5331 5254 12894 111 15 3 chr2 204262126 204264025 -46423829 + Tigger1 DNA MER2_type 279 2200 -218 432 0 0 0 chr2 204264027 204264075 -46423779 + (TA)n Simple_repeat Simple_repeat 1 48 0 2118 106 0 0 chr2 204264118 204264391 -46423463 - AluSx SINE Alu -39 273 1 794 194 6 40 chr2 204264397 204264572 -46423282 - AluJo SINE Alu -24 288 120 805 166 112 12 chr2 204264572 204264741 -46423113 + Tigger1 DNA MER2_type 2233 2418 0 5757 174 29 11 chr2 204264741 204266304 -46421550 - L1MB1 LINE L1 -383 5785 4198 4358 47 0 0 chr2 204266356 204266888 -46420966 - L1PA5 LINE L1 -2 6152 5621 180 0 0 0 chr2 204267039 204267059 -46420795 + (CA)n Simple_repeat Simple_repeat 1 20 0 1859 153 0 41 chr2 204267198 204267493 -46420361 + AluJb SINE Alu 1 283 -29 30 0 0 0 chr2 204267494 204267524 -46420330 + AT_rich Low_complexity Low_complexity 1 30 0 2182 103 0 3 chr2 204267540 204267832 -46420022 - AluSg SINE Alu -19 291 1 285 29 0 0 chr2 204268125 204268159 -46419695 + (A)n Simple_repeat Simple_repeat 1 34 0 4387 180 20 8 chr2 204268875 204269797 -46418057 + L1MB8 LINE L1 5236 6166 -12 1809 164 31 60 chr2 204270488 204270550 -46417304 - MLT1A2 LTR MaLR -1 373 311 1169 48 0 0 chr2 204270550 204270696 -46417158 - L1PA6 LINE L1 -4 6150 6005 1809 164 31 60 chr2 204270696 204271017 -46416837 - MLT1A2 LTR MaLR -63 311 1 476 283 7 0 chr2 204271148 204271293 -46416561 + L1M4 LINE L1 3602 3747 -2399 29 28 0 0 chr2 204271812 204271848 -46416006 + AT_rich Low_complexity Low_complexity 1 36 0 1292 132 47 19 chr2 204273538 204273796 -46414058 + Tigger2 DNA MER2_type 1 265 -2453 3263 124 49 81 chr2 204273871 204274200 -46413654 + Tigger2 DNA MER2_type 198 536 -2182 1685 78 0 14 chr2 204274200 204274419 -46413435 + AluSp SINE Alu 83 298 -15 3263 124 49 81 chr2 204274419 204274475 -46413379 + Tigger2 DNA MER2_type 536 592 -2126 1533 159 71 17 chr2 204274475 204274770 -46413084 - AluJb SINE Alu -1 311 1 3263 124 49 81 chr2 204274770 204275061 -46412793 + Tigger2 DNA MER2_type 592 853 -1865 818 177 30 18 chr2 204275056 204275220 -46412634 + Tigger2 DNA MER2_type 2542 2707 -11 * 2070 138 0 0 chr2 204277728 204278018 -46409836 + AluSx SINE Alu 1 290 -22 2445 67 3 0 chr2 204278723 204279023 -46408831 + AluY SINE Alu 1 301 -10 2125 119 0 17 chr2 204279052 204279382 -46408472 + AluSx SINE Alu 13 312 0 9433 198 48 12 chr2 204280797 204282641 -46405213 + L1M2c LINE L1 6 1931 -4858 1937 133 18 0 chr2 204282641 204282991 -46404863 + AluSx SINE Alu 1 355 0 9433 198 48 12 chr2 204282991 204283164 -46404690 + L1M2c LINE L1 1931 2096 -4693 941 219 50 17 chr2 204283168 204283283 -46404571 + MLT1E3 LTR MaLR 379 489 -135 2349 89 0 0 chr2 204283283 204283576 -46404278 - AluSg SINE Alu -17 293 1 941 219 50 17 chr2 204283576 204283698 -46404156 + MLT1E3 LTR MaLR 489 624 0 21 0 0 0 chr2 204283847 204283868 -46403986 + AT_rich Low_complexity Low_complexity 1 21 0 2307 118 0 6 chr2 204284085 204284399 -46403455 + AluSx SINE Alu 1 312 0 332 306 156 38 chr2 204284408 204284594 -46403260 + L2 LINE L2 2736 2943 -371 2408 76 0 0 chr2 204284680 204284982 -46402872 - AluY SINE Alu -9 302 1 246 32 0 0 chr2 204284998 204285029 -46402825 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6255 55 41 36 chr2 204285029 204285960 -46401894 - SVA Other Other -19 1367 433 632 43 0 11 chr2 204285976 204286068 -46401786 - SVA Other Other -520 866 776 324 232 0 14 chr2 204286573 204286642 -46401212 - MER96 DNA MER1_type? -107 68 1 326 252 113 36 chr2 204286923 204287010 -46400844 + L1ME LINE L1 677 756 -5314 1625 199 30 19 chr2 204287010 204287371 -46400483 + MLT1A1 LTR MaLR 1 365 0 326 252 113 36 chr2 204287371 204287585 -46400269 + L1ME LINE L1 756 1001 -5069 1568 144 11 53 chr2 204287710 204287994 -46399860 + AluJo SINE Alu 27 298 -14 189 0 0 0 chr2 204288201 204288222 -46399632 + (T)n Simple_repeat Simple_repeat 1 21 0 4972 36 5 0 chr2 204288703 204289305 -46398549 - L1PA5 LINE L1 0 6154 5550 24 32 0 0 chr2 204289305 204289336 -46398518 + AT_rich Low_complexity Low_complexity 1 31 0 693 300 26 17 chr2 204289342 204289575 -46398279 - MIR SINE MIR -27 235 1 349 272 56 72 chr2 204289584 204289764 -46398090 + L2 LINE L2 2324 2500 -814 1572 205 53 69 chr2 204289835 204290327 -46397527 - MLT2B1 LTR ERVL 0 520 37 12511 165 24 14 chr2 204290330 204292396 -46395458 - ERVL LTR ERVL -2545 3219 1127 1746 161 45 3 chr2 204292396 204292688 -46395166 + AluJb SINE Alu 1 304 -8 12511 165 24 14 chr2 204292688 204292846 -46395008 - ERVL LTR ERVL -4637 1127 972 22 0 0 0 chr2 204292931 204292953 -46394901 + AT_rich Low_complexity Low_complexity 1 22 0 675 244 169 14 chr2 204292953 204293166 -46394688 - MIR SINE MIR -3 259 14 304 318 72 118 chr2 204293169 204293653 -46394201 + L2 LINE L2 2811 3272 0 456 253 178 15 chr2 204294683 204294885 -46392969 - MIR SINE MIR -7 255 21 295 204 222 0 chr2 204295601 204295709 -46392145 + L1ME LINE L1 5536 5667 -454 542 188 143 0 chr2 204295927 204296039 -46391815 - FLAM_A SINE Alu -5 128 1 2259 120 0 0 chr2 204296151 204296452 -46391402 - AluSx SINE Alu -11 301 1 22 0 0 0 chr2 204296593 204296615 -46391239 + AT_rich Low_complexity Low_complexity 1 22 0 201 303 0 15 chr2 204297050 204297116 -46390738 + (CATA)n Simple_repeat Simple_repeat 4 68 0 275 191 16 0 chr2 204297531 204297594 -46390260 + GA-rich Low_complexity Low_complexity 2 65 0 26 0 0 0 chr2 204297826 204297852 -46390002 + AT_rich Low_complexity Low_complexity 1 26 0 3789 119 2 2 chr2 204297888 204298415 -46389439 + MER1A DNA MER1_type 1 527 0 3546 143 60 22 chr2 204298640 204299320 -46388534 + LTR62 LTR ERVK 1 706 -13 1675 138 6 22 chr2 204299499 204299810 -46388044 + MER46B DNA MER2_type 54 234 -2 3396 143 75 16 chr2 204299811 204300504 -46387350 + L1MA7 LINE L1 5557 6290 -1 317 284 47 53 chr2 204300797 204300966 -46386888 - L1MEc LINE L1 -4403 1993 1826 539 188 0 0 chr2 204300967 204301084 -46386770 - L1MEc LINE L1 -5134 1071 955 259 255 74 29 chr2 204301482 204301725 -46386129 - L1MC4 LINE L1 -91 7951 7698 1857 149 0 34 chr2 204301725 204301927 -46385927 - AluJb SINE Alu -2 310 122 181 29 59 29 chr2 204301927 204301961 -46385893 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1857 149 0 34 chr2 204301961 204302079 -46385775 - AluJb SINE Alu -190 122 1 249 250 12 36 chr2 204302248 204302332 -46385522 - L1MC5 LINE L1 -569 7392 7311 2008 138 23 3 chr2 204302336 204302641 -46385213 - AluJo SINE Alu -1 311 1 789 277 124 44 chr2 204302641 204303204 -46384650 - L1MC4 LINE L1 -558 7484 6877 835 253 4 31 chr2 204303259 204303488 -46384366 + L1ME LINE L1 298 520 -5550 523 129 0 0 chr2 204303525 204303618 -46384236 + L1MA8 LINE L1 6193 6285 -6 1396 183 0 0 chr2 204303619 204303854 -46384000 + AluSx SINE Alu 1 235 -77 336 213 43 64 chr2 204303929 204304023 -46383831 - L1MC4 LINE L1 -1341 6701 6610 312 273 23 0 chr2 204303989 204304077 -46383777 + L1MC4 LINE L1 6614 6703 -1339 * 2170 85 4 0 chr2 204304112 204304383 -46383471 - AluSp SINE Alu -21 292 21 330 361 76 34 chr2 204305471 204305826 -46382028 + L1MEd LINE L1 87 456 -5749 866 284 91 103 chr2 204306059 204306528 -46381326 + L1MEd LINE L1 604 1077 -5319 1800 148 0 4 chr2 204306528 204306792 -46381062 + AluJb SINE Alu 27 289 -23 866 284 91 103 chr2 204306792 204306998 -46380856 + L1MEd LINE L1 1077 1284 -5112 2325 82 0 0 chr2 204306998 204307307 -46380547 + AluSg SINE Alu 1 309 0 866 284 91 103 chr2 204307307 204307612 -46380242 + L1MEd LINE L1 1284 1635 -4761 2195 36 18 4 chr2 204307612 204307887 -46379967 + L1PA7 LINE L1 5876 6154 0 866 284 91 103 chr2 204307887 204308074 -46379780 + L1MEd LINE L1 1635 1823 -4573 382 123 62 0 chr2 204308341 204308406 -46379448 + Tigger2 DNA MER2_type 1 69 -2649 * 2243 140 73 9 chr2 204308393 204308815 -46379039 + Tigger2 DNA MER2_type 2270 2718 0 387 282 9 0 chr2 204308846 204308956 -46378898 + L1MEd LINE L1 2154 2264 -4132 209 194 0 32 chr2 204309440 204309502 -46378352 + CT-rich Low_complexity Low_complexity 2 61 0 1485 289 78 19 chr2 204309510 204310268 -46377586 - L1ME LINE L1 -4312 2084 1282 10542 138 8 58 chr2 204310272 204312462 -46375392 + L1PA13 LINE L1 3270 5351 -795 * 36146 31 26 3 chr2 204312457 204317678 -46370176 - L1PA3 LINE L1 0 6155 824 2638 23 7 0 chr2 204317678 204317983 -46369871 - AluY SINE Alu -4 307 1 36146 31 26 3 chr2 204317983 204318242 -46369612 - L1PA3 LINE L1 -5331 824 572 5635 79 16 12 chr2 204318245 204319080 -46368774 + L1PA13 LINE L1 5324 6161 -2 534 273 86 31 chr2 204319082 204319597 -46368257 - L1ME LINE L1 -5066 1139 658 381 350 7 32 chr2 204320001 204320284 -46367570 - L1ME LINE L1 -6085 311 36 1802 168 3 25 chr2 204320584 204320900 -46366954 - AluJo SINE Alu -3 309 1 1517 214 84 30 chr2 204320938 204321091 -46366763 + MER74B LTR ERVL 78 221 -401 1992 133 28 0 chr2 204321091 204321376 -46366478 - AluSx SINE Alu -19 293 1 1517 214 84 30 chr2 204321376 204321684 -46366170 + MER74B LTR ERVL 221 564 -58 566 258 78 64 chr2 204321767 204322217 -46365637 - HAL1 LINE L1 -110 2397 1942 4770 48 0 0 chr2 204322514 204323094 -46364760 + L1PA6 LINE L1 5575 6154 0 2179 125 7 0 chr2 204323248 204323545 -46364309 - AluSx SINE Alu -13 299 1 497 262 0 16 chr2 204323647 204323769 -46364085 + MIR SINE MIR 32 151 -111 387 0 0 0 chr2 204323769 204323812 -46364042 + (TG)n Simple_repeat Simple_repeat 1 43 0 404 285 16 8 chr2 204325136 204325259 -46362595 + MLT1H1 LTR MaLR 8 131 -424 515 180 41 0 chr2 204325260 204325382 -46362472 + MER96B DNA MER1_type? 2 128 -289 522 279 142 4 chr2 204325442 204325675 -46362179 + MLT1H1 LTR MaLR 291 555 0 326 23 23 0 chr2 204326622 204326665 -46361189 + (TG)n Simple_repeat Simple_repeat 1 44 0 418 270 22 96 chr2 204326734 204326912 -46360942 - MER5A DNA MER1_type -6 183 19 438 196 0 0 chr2 204327551 204327643 -46360211 + (CA)n Simple_repeat Simple_repeat 2 93 0 539 289 75 65 chr2 204328590 204329112 -46358742 + HAL1b LINE L1 159 689 -659 2277 117 0 0 chr2 204329112 204329411 -46358443 + AluSx SINE Alu 1 299 -13 539 289 75 65 chr2 204329411 204329459 -46358395 + HAL1b LINE L1 689 735 -613 * 1040 158 21 1 chr2 204329456 204329680 -46358174 + L1M2 LINE L1 2697 2926 -3922 556 293 18 6 chr2 204329697 204329861 -46357993 + MIR SINE MIR 35 200 -62 1403 163 61 50 chr2 204329865 204330142 -46357712 + AluJo SINE Alu 1 280 -32 789 187 14 3 chr2 204330226 204330509 -46357345 + MLT1B LTR MaLR 2 381 -9 183 250 77 0 chr2 204330561 204330613 -46357241 - L2 LINE L2 -3 3269 3214 835 207 7 7 chr2 204330662 204330807 -46357047 - FRAM SINE Alu -31 145 1 265 221 39 0 chr2 204330807 204330884 -46356970 + MER96B DNA MER1_type? 39 118 -299 2006 171 0 0 chr2 204331031 204331341 -46356513 + AluJb SINE Alu 2 311 -1 8807 188 33 19 chr2 204331372 204332668 -46355186 + L1M2 LINE L1 2879 4217 -2631 2432 66 0 13 chr2 204332668 204332969 -46354885 + AluY SINE Alu 1 297 -14 8807 188 33 19 chr2 204332969 204333781 -46354073 + L1M2 LINE L1 4217 5016 -1832 1197 226 46 3 chr2 204333777 204334167 -46353687 + L1 LINE L1 2797 3203 -2943 * 396 269 83 14 chr2 204334582 204334727 -46353127 - MIR SINE MIR -27 235 81 2179 111 3 19 chr2 204334788 204335095 -46352759 + AluSx SINE Alu 1 302 -10 38963 66 5 2 chr2 204335095 204341217 -46346637 + L1PA6 LINE L1 10 6154 0 263 248 147 18 chr2 204342012 204342121 -46345733 + L2 LINE L2 2259 2381 -933 2111 90 48 0 chr2 204342341 204342652 -46345202 + L1PA15 LINE L1 5832 6157 -8 2584 127 39 11 chr2 204342924 204343357 -46344497 - MER65A LTR ERV1 0 445 1 1315 165 168 28 chr2 204343713 204344153 -46343701 + L1MD2 LINE L1 5473 5961 -209 1873 224 132 21 chr2 204344753 204345312 -46342542 - MLT1E2 LTR MaLR -5 621 1 268 236 0 0 chr2 204346071 204346126 -46341728 - MER5B DNA MER1_type -122 56 2 21 0 0 0 chr2 204346250 204346271 -46341583 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 204347009 204347038 -46340816 + AT_rich Low_complexity Low_complexity 1 29 0 235 274 179 0 chr2 204347211 204347295 -46340559 - MIR SINE MIR -30 232 134 21 0 0 0 chr2 204347523 204347544 -46340310 + AT_rich Low_complexity Low_complexity 1 21 0 2470 69 3 0 chr2 204347577 204347882 -46339972 + AluY SINE Alu 1 306 -5 216 0 0 0 chr2 204349030 204349054 -46338800 + (A)n Simple_repeat Simple_repeat 1 24 0 2081 122 7 0 chr2 204349295 204349589 -46338265 + AluSx SINE Alu 1 296 -16 195 243 0 0 chr2 204350161 204350198 -46337656 - MIR SINE MIR -150 112 76 22 0 0 0 chr2 204350485 204350507 -46337347 + AT_rich Low_complexity Low_complexity 1 22 0 1841 209 43 9 chr2 204350978 204351424 -46336430 + MLT1C LTR MaLR 7 467 0 388 99 16 215 chr2 204351428 204351549 -46336305 + MLT1-int LTR MaLR 1210 1306 -65 23 0 0 0 chr2 204352610 204352633 -46335221 + AT_rich Low_complexity Low_complexity 1 23 0 387 277 67 17 chr2 204353235 204353354 -46334500 + MIR3 SINE MIR 9 133 -75 1225 212 91 21 chr2 204353550 204353889 -46333965 + MLT1A2 LTR MaLR 1 363 -11 271 244 0 24 chr2 204354127 204354209 -46333645 - L1ME4a LINE L1 -85 6036 5957 629 284 13 4 chr2 204354255 204354484 -46333370 - L1ME4a LINE L1 -257 5864 5634 545 291 50 22 chr2 204354788 204354967 -46332887 + MIR3 SINE MIR 20 203 -5 1579 96 36 25 chr2 204354975 204355299 -46332555 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr2 204356054 204356076 -46331778 + AT_rich Low_complexity Low_complexity 1 22 0 2474 198 53 31 chr2 204356161 204356711 -46331143 - MER68 LTR ERV1 0 562 1 24 0 0 0 chr2 204357410 204357434 -46330420 + AT_rich Low_complexity Low_complexity 1 24 0 524 249 102 35 chr2 204357514 204357683 -46330171 - L1ME4a LINE L1 -3 6118 5962 1850 196 41 37 chr2 204357683 204357975 -46329879 + MLT1C LTR MaLR 2 298 -169 2257 101 3 3 chr2 204357975 204358273 -46329581 + AluSq SINE Alu 1 298 -15 1850 196 41 37 chr2 204358273 204358444 -46329410 + MLT1C LTR MaLR 298 467 0 524 249 102 35 chr2 204358444 204358675 -46329179 - L1ME4a LINE L1 -159 5962 5691 190 196 65 0 chr2 204358853 204358899 -46328955 + MIR SINE MIR 214 262 0 556 285 103 36 chr2 204359935 204359959 -46327895 + L1MC4a LINE L1 5346 5367 -2441 2265 112 0 3 chr2 204359959 204360264 -46327590 + AluSx SINE Alu 3 306 -6 556 285 103 36 chr2 204360264 204360706 -46327148 + L1MC4a LINE L1 5367 5843 -1965 184 360 11 11 chr2 204360814 204360903 -46326951 - L2 LINE L2 -822 2492 2404 484 298 13 7 chr2 204361801 204361952 -46325902 + MLT1I LTR MaLR 68 219 -190 2263 116 0 0 chr2 204362009 204362311 -46325543 + AluSx SINE Alu 1 302 -10 339 213 63 7 chr2 204362381 204362473 -46325381 + MLT1I LTR MaLR 324 405 -4 2202 115 0 0 chr2 204363492 204363787 -46324067 - AluSx SINE Alu -17 295 1 421 260 8 41 chr2 204363991 204364114 -46323740 - L2 LINE L2 -41 3272 3154 231 194 37 46 chr2 204364114 204364222 -46323632 + (TA)n Simple_repeat Simple_repeat 1 107 0 306 287 180 61 chr2 204364248 204364595 -46323259 - L2 LINE L2 -224 3089 2634 336 279 138 102 chr2 204365531 204366062 -46321792 + L1M2 LINE L1 378 927 -5922 510 230 43 14 chr2 204366530 204366669 -46321185 - LTR45 LTR ERV1 0 525 383 231 36 0 0 chr2 204366930 204366958 -46320896 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 24 53 0 0 chr2 204367550 204367588 -46320266 + AT_rich Low_complexity Low_complexity 1 38 0 1043 167 12 0 chr2 204368153 204368321 -46319533 - AluJb SINE Alu -17 295 126 522 170 38 28 chr2 204369211 204369317 -46318537 + U6 snRNA snRNA 1 107 0 586 104 60 75 chr2 204369317 204369451 -46318403 + L1MB2 LINE L1 6030 6161 -10 452 208 59 0 chr2 204369479 204369580 -46318274 + L1ME3 LINE L1 6049 6155 -7 24 0 0 0 chr2 204370008 204370032 -46317822 + AT_rich Low_complexity Low_complexity 1 24 0 1109 169 0 0 chr2 204370345 204370517 -46317337 - AluJb SINE Alu -6 306 135 195 42 0 0 chr2 204370517 204370541 -46317313 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1731 161 22 0 chr2 204370542 204370809 -46317045 - AluSx SINE Alu -36 276 4 2002 147 0 19 chr2 204371271 204371569 -46316285 + AluSx SINE Alu 1 294 -18 243 79 0 0 chr2 204371569 204371607 -46316247 + (CA)n Simple_repeat Simple_repeat 2 39 0 279 314 113 32 chr2 204373028 204373213 -46314641 - MIR SINE MIR -52 210 11 431 300 10 0 chr2 204373456 204373556 -46314298 - L2 LINE L2 0 3272 3172 2245 119 3 0 chr2 204374167 204374478 -46313376 + AluSx SINE Alu 1 312 0 2086 121 0 0 chr2 204374672 204374978 -46312876 + AluSx SINE Alu 1 306 0 2221 116 3 0 chr2 204376477 204376771 -46311083 - AluSx SINE Alu -17 295 1 1470 35 0 12 chr2 204376959 204377130 -46310724 + L1PA4 LINE L1 5986 6154 -1 934 217 11 6 chr2 204377871 204378046 -46309808 + MER45A DNA AcHobo 1 176 -2 1075 259 118 16 chr2 204379052 204379697 -46308157 - L2 LINE L2 -27 3286 2564 1005 184 143 0 chr2 204379871 204380088 -46307766 - L1MC4 LINE L1 -1304 6738 6491 235 180 20 0 chr2 204380471 204380521 -46307333 + MER5B DNA MER1_type 125 175 -3 1911 99 30 0 chr2 204381422 204381684 -46306170 - AluSq SINE Alu -43 270 1 2137 119 0 3 chr2 204382046 204382332 -46305522 + AluSx SINE Alu 1 285 -27 2210 118 3 0 chr2 204383419 204383716 -46304138 - AluSx SINE Alu -14 298 1 603 226 231 29 chr2 204384110 204384318 -46303536 - MIR SINE MIR 0 262 13 661 176 44 49 chr2 204384546 204384751 -46303103 - MER20B DNA MER1_type -1 782 579 1829 123 12 0 chr2 204384764 204385016 -46302838 + AluSx SINE Alu 48 302 -10 399 223 39 10 chr2 204385778 204385881 -46301973 - MER20B DNA MER1_type -677 106 1 1488 189 0 4 chr2 204385963 204386228 -46301626 + AluJo SINE Alu 35 298 -14 1061 146 11 34 chr2 204386228 204386406 -46301448 + AluJo/FRAM SINE Alu 134 307 -5 632 232 146 89 chr2 204387169 204387559 -46300295 + L1MC4a LINE L1 5566 5999 -1809 2484 56 0 16 chr2 204387559 204387865 -46299989 - AluY SINE Alu -10 301 1 632 232 146 89 chr2 204387865 204388044 -46299810 + L1MC4a LINE L1 5999 6167 -1641 22 0 0 0 chr2 204388458 204388480 -46299374 + AT_rich Low_complexity Low_complexity 1 22 0 2167 123 0 9 chr2 204388934 204389250 -46298604 + AluSq SINE Alu 1 313 0 416 223 201 0 chr2 204389469 204389608 -46298246 + MIR SINE MIR 92 258 -4 253 263 126 21 chr2 204389953 204390048 -46297806 + L2 LINE L2 3201 3305 -8 254 312 26 0 chr2 204390106 204390183 -46297671 + L2 LINE L2 3193 3271 -1 811 178 61 12 chr2 204390754 204390917 -46296937 + MLT1B LTR MaLR 5 175 -215 427 81 58 0 chr2 204390934 204391020 -46296834 + CT-rich Low_complexity Low_complexity 2 92 0 1086 174 11 5 chr2 204391027 204391217 -46296637 + MLT1B LTR MaLR 192 382 -8 306 0 0 0 chr2 204391584 204391618 -46296236 + (TG)n Simple_repeat Simple_repeat 1 34 0 277 293 104 9 chr2 204391785 204391891 -46295963 + MIR SINE MIR 103 218 -44 198 191 0 0 chr2 204392609 204392651 -46295203 + GA-rich Low_complexity Low_complexity 3 44 0 4617 96 0 8 chr2 204393254 204393870 -46293984 + L1PA7 LINE L1 2 612 -5849 13236 89 23 7 chr2 204393870 204396078 -46291776 + L1PA7 LINE L1 2426 6469 0 3809 152 85 22 chr2 204397010 204397694 -46290160 + LTR8A LTR ERV1 1 727 0 413 244 0 0 chr2 204398425 204398515 -46289339 + MER5A DNA MER1_type 21 110 -79 338 261 109 51 chr2 204398577 204398715 -46289139 - MER5A DNA MER1_type -7 182 37 * 371 264 36 43 chr2 204398594 204398734 -46289120 + MER5A DNA MER1_type 45 183 -6 325 276 69 0 chr2 204398740 204398827 -46289027 - MIR3 SINE MIR -48 160 68 285 281 219 7 chr2 204398856 204399002 -46288852 + MIR SINE MIR 26 202 -60 2191 113 3 0 chr2 204399113 204399406 -46288448 + AluSx SINE Alu 1 294 -18 205 192 0 19 chr2 204399634 204399686 -46288168 + CT-rich Low_complexity Low_complexity 2 52 0 351 280 21 56 chr2 204400154 204400297 -46287557 + MER5A DNA MER1_type 45 182 -7 849 217 242 3 chr2 204400698 204401016 -46286838 + L2 LINE L2 38 431 -2883 460 235 212 0 chr2 204401016 204401186 -46286668 + MER63 DNA MER1_type 1 1684 -4 3810 246 228 8 chr2 204401193 204402647 -46285207 + L2 LINE L2 427 2200 -1114 2422 150 3 6 chr2 204402716 204403082 -46284772 - MLT1A1 LTR MaLR 0 365 1 21 36 0 0 chr2 204405515 204405543 -46282311 + AT_rich Low_complexity Low_complexity 1 28 0 304 254 23 62 chr2 204405549 204405679 -46282175 - L1ME LINE L1 -600 5566 5442 2011 160 0 10 chr2 204405962 204406275 -46281579 + AluSx SINE Alu 1 310 -2 1874 168 3 0 chr2 204406433 204406731 -46281123 + AluJo SINE Alu 1 299 -13 480 221 133 38 chr2 204406855 204407013 -46280841 + MIR SINE MIR 20 192 -70 2510 65 10 0 chr2 204407165 204407473 -46280381 + AluY SINE Alu 1 311 0 620 183 61 8 chr2 204408662 204408793 -46279061 - MIR SINE MIR -34 228 91 21 0 0 0 chr2 204409888 204409909 -46277945 + AT_rich Low_complexity Low_complexity 1 21 0 2408 242 40 39 chr2 204410702 204411098 -46276756 - L2 LINE L2 0 3313 2919 1890 134 25 38 chr2 204411098 204411412 -46276442 - AluSx SINE Alu -2 310 1 2408 242 40 39 chr2 204411412 204411541 -46276313 - L2 LINE L2 -394 2919 2792 1906 161 10 0 chr2 204411541 204411846 -46276008 + AluSx SINE Alu 1 308 -4 2408 242 40 39 chr2 204411846 204412413 -46275441 - L2 LINE L2 -521 2792 2220 2080 147 0 3 chr2 204414001 204414314 -46273540 - AluSx SINE Alu 0 312 1 1460 189 48 16 chr2 204414697 204414757 -46273097 + MLT1A1 LTR MaLR 1 58 -307 2305 107 0 0 chr2 204414757 204415057 -46272797 + AluSx SINE Alu 1 300 -12 1460 189 48 16 chr2 204415057 204415308 -46272546 + MLT1A1 LTR MaLR 58 322 -43 207 350 69 12 chr2 204415620 204415807 -46272047 + MIR3 SINE MIR 15 210 -52 193 269 119 0 chr2 204416584 204416651 -46271203 - L2 LINE L2 -41 3231 3157 1760 174 23 16 chr2 204417104 204417409 -46270445 - AluJo SINE Alu -5 307 1 905 217 29 99 chr2 204417499 204417844 -46270010 - MLT1J LTR MaLR -8 503 183 574 253 30 48 chr2 204417834 204418000 -46269854 + MER20B DNA MER1_type 153 315 -468 * 500 196 20 0 chr2 204417999 204418101 -46269753 - LTR16C LTR ERVL -93 398 295 * 333 221 0 0 chr2 204418422 204418490 -46269364 + MER20B DNA MER1_type 716 783 0 1383 192 50 36 chr2 204419427 204419791 -46268063 + MLT1A2 LTR MaLR 6 374 0 262 304 43 22 chr2 204419958 204420050 -46267804 + L2 LINE L2 3209 3302 -11 297 250 0 14 chr2 204420254 204420326 -46267528 - MIR3 SINE MIR -30 178 108 422 306 101 42 chr2 204424912 204425219 -46262635 - L1ME LINE L1 -459 5662 5338 2271 106 0 0 chr2 204425329 204425622 -46262232 + AluSx SINE Alu 1 293 -19 385 294 105 49 chr2 204425809 204426115 -46261739 - L1ME LINE L1 -1214 4932 4610 1185 131 0 6 chr2 204428283 204428458 -46259396 + AluSg/x SINE Alu 120 293 -16 2097 145 0 0 chr2 204428599 204428902 -46258952 + AluSx SINE Alu 1 303 -9 219 111 62 12 chr2 204429031 204429112 -46258742 + (TA)n Simple_repeat Simple_repeat 2 86 0 1734 173 7 3 chr2 204429929 204430224 -46257630 - AluJo SINE Alu -16 296 1 189 219 49 0 chr2 204430239 204430280 -46257574 - MIR SINE MIR -55 153 111 1007 198 0 5 chr2 204430898 204431095 -46256759 - L1PB4 LINE L1 -3 6153 5958 1119 241 73 24 chr2 204431634 204431974 -46255880 + L2 LINE L2 2956 3312 -1 816 158 0 15 chr2 204432811 204432944 -46254910 + FLAM_A SINE Alu 1 131 -2 286 233 39 19 chr2 204435213 204435316 -46252538 + GA-rich Low_complexity Low_complexity 2 106 0 2179 216 119 41 chr2 204435327 204435619 -46252235 - L1MDa LINE L1 -4672 1868 1600 2072 101 50 0 chr2 204435619 204435917 -46251937 - AluSq SINE Alu 0 313 1 2179 216 119 41 chr2 204435917 204436428 -46251426 - L1MDa LINE L1 -4940 1600 1002 303 173 0 0 chr2 204436443 204436495 -46251359 + MER68 LTR ERV1 5 56 -506 846 155 0 34 chr2 204436495 204436643 -46251211 + FLAM_C SINE Alu 1 143 0 1734 245 65 30 chr2 204436643 204437136 -46250718 + MER68 LTR ERV1 53 562 0 240 204 0 0 chr2 204437156 204437205 -46250649 - L1MDa LINE L1 -5569 974 926 400 357 41 45 chr2 204437747 204438061 -46249793 - L1MDa LINE L1 -6209 331 19 2291 94 0 28 chr2 204438621 204438757 -46249097 + AluSx SINE Alu 1 139 -173 2308 105 3 0 chr2 204438757 204439061 -46248793 + AluSx SINE Alu 1 305 -7 2291 94 0 28 chr2 204439061 204439244 -46248610 + AluSx SINE Alu 139 311 -1 21 0 0 0 chr2 204439404 204439425 -46248429 + AT_rich Low_complexity Low_complexity 1 21 0 2086 115 0 45 chr2 204439678 204439992 -46247862 + AluSx SINE Alu 1 300 -12 2030 128 16 0 chr2 204440157 204440463 -46247391 + AluJo SINE Alu 1 311 -1 2259 98 0 3 chr2 204440761 204441056 -46246798 - AluSx SINE Alu -18 294 1 7601 199 103 19 chr2 204441187 204441658 -46246196 + L1MB7 LINE L1 2880 3310 -2874 894 171 139 81 chr2 204441658 204441804 -46246050 + MLT1A1 LTR MaLR 1 137 -228 2275 107 3 0 chr2 204441804 204442113 -46245741 + AluSg SINE Alu 1 310 0 894 171 139 81 chr2 204442113 204442311 -46245543 + MLT1A1 LTR MaLR 137 365 0 7601 199 103 19 chr2 204442311 204442916 -46244938 + L1MB7 LINE L1 3310 3863 -2321 1897 133 0 37 chr2 204442916 204443210 -46244644 + AluJo SINE Alu 1 283 -29 300 27 0 0 chr2 204443210 204443247 -46244607 + (CA)n Simple_repeat Simple_repeat 2 38 0 7601 199 103 19 chr2 204443247 204444168 -46243686 + L1MB7 LINE L1 3863 4706 -1478 2248 86 0 0 chr2 204444168 204444446 -46243408 - AluY SINE Alu -21 290 13 7601 199 103 19 chr2 204444446 204445465 -46242389 + L1MB7 LINE L1 4706 6156 -28 1963 149 17 3 chr2 204446330 204446631 -46241223 + AluSx SINE Alu 1 305 -7 2529 60 0 0 chr2 204447327 204447625 -46240229 + AluY SINE Alu 1 298 -13 341 259 80 80 chr2 204448185 204448347 -46239507 + MIR3 SINE MIR 34 195 -13 2301 58 10 0 chr2 204450599 204450890 -46236964 - L1PA5 LINE L1 -8 6146 5853 4086 190 115 22 chr2 204451954 204452098 -46235756 - Charlie1a DNA MER1_type -1306 1455 1326 2489 47 3 3 chr2 204452098 204452399 -46235455 + AluY SINE Alu 5 305 -6 4086 190 115 22 chr2 204452399 204453268 -46234586 - Charlie1a DNA MER1_type -1435 1326 347 1673 160 26 0 chr2 204453269 204453537 -46234317 - Charlie1a DNA MER1_type -1174 281 7 288 294 0 15 chr2 204453671 204453739 -46234115 - L2 LINE L2 -1 3271 3205 640 204 98 71 chr2 204453838 204454093 -46233761 + MIR SINE MIR 1 262 0 240 296 40 80 chr2 204454142 204454267 -46233587 + MER5B DNA MER1_type 59 178 0 1963 120 3 59 chr2 204454773 204455097 -46232757 + AluSx SINE Alu 7 312 0 1844 153 28 3 chr2 204456688 204456976 -46230878 + AluJb SINE Alu 1 295 -17 22 0 0 0 chr2 204457409 204457431 -46230423 + AT_rich Low_complexity Low_complexity 1 22 0 1841 192 35 52 chr2 204457431 204457894 -46229960 + L1MB4 LINE L1 5726 6180 0 33 43 0 0 chr2 204458538 204458585 -46229269 + AT_rich Low_complexity Low_complexity 1 47 0 298 167 71 24 chr2 204458645 204458729 -46229125 + L1M4 LINE L1 2203 2290 -3856 773 265 108 44 chr2 204458886 204459546 -46228308 + L1M4 LINE L1 2918 3619 -2527 1612 185 80 3 chr2 204459550 204459863 -46227991 - MER2 DNA MER2_type -8 337 1 258 301 56 21 chr2 204459949 204460092 -46227762 + L1M4 LINE L1 3945 4092 -2054 2212 119 0 0 chr2 204460135 204460429 -46227425 + AluSx SINE Alu 1 294 -18 225 200 0 0 chr2 204460429 204460469 -46227385 + L1MC4 LINE L1 7931 7970 -72 724 159 7 58 chr2 204460514 204460652 -46227202 + FLAM_C SINE Alu 1 131 -2 280 247 20 16 chr2 204460852 204460960 -46226894 - MIR SINE MIR -57 151 42 1871 159 13 3 chr2 204461452 204461754 -46226100 + AluJb SINE Alu 1 305 -7 2387 97 0 0 chr2 204461956 204462264 -46225590 + AluSq SINE Alu 1 308 -5 385 137 0 0 chr2 204462458 204462531 -46225323 + L1MB3 LINE L1 6109 6181 -2 1665 155 0 8 chr2 204462539 204462797 -46225057 + AluJb SINE Alu 2 257 -55 27 29 0 0 chr2 204462797 204462831 -46225023 + AT_rich Low_complexity Low_complexity 1 34 0 380 158 18 35 chr2 204463200 204463314 -46224540 + L1ME4a LINE L1 5957 6068 -53 220 252 244 37 chr2 204464509 204464644 -46223210 + MER5A DNA MER1_type 27 189 0 299 303 28 28 chr2 204464646 204464755 -46223099 - MIR3 SINE MIR -50 158 50 2187 121 3 0 chr2 204465285 204465590 -46222264 + AluSx SINE Alu 1 306 -6 2121 95 28 0 chr2 204465985 204466268 -46221586 - AluSg SINE Alu -17 293 3 401 268 15 23 chr2 204466980 204467111 -46220743 - MER63 DNA MER1_type -3 1057 706 718 185 23 0 chr2 204467713 204467843 -46220011 - FLAM_C SINE Alu 0 133 1 26 0 0 27 chr2 204468150 204468162 -46219692 + AT_rich Low_complexity Low_complexity 1 12 -24 2109 133 0 0 chr2 204468162 204468455 -46219399 + AluSx SINE Alu 1 293 -19 26 0 0 27 chr2 204468455 204468479 -46219375 + AT_rich Low_complexity Low_complexity 12 36 0 658 239 63 90 chr2 204468695 204468963 -46218891 - L2 LINE L2 -5 3308 3048 727 137 66 107 chr2 204469828 204469958 -46217896 + MER5A DNA MER1_type 1 122 -67 2323 52 39 0 chr2 204469958 204470244 -46217610 - AluY SINE Alu -14 297 1 727 137 66 107 chr2 204470244 204470310 -46217544 + MER5A DNA MER1_type 122 189 0 230 0 33 0 chr2 204470689 204470719 -46217135 + (TG)n Simple_repeat Simple_repeat 2 32 0 1196 138 0 11 chr2 204472506 204472694 -46215160 + AluSq SINE Alu 128 313 0 530 249 178 11 chr2 204472723 204472908 -46214946 - MIR SINE MIR 0 262 47 324 252 52 0 chr2 204473123 204473238 -46214616 - L1ME4a LINE L1 -2 6119 5999 2245 117 3 0 chr2 204473348 204473648 -46214206 - AluSq SINE Alu -12 301 1 421 267 162 46 chr2 204473648 204474022 -46213832 - L1ME4a LINE L1 -387 5734 5318 189 107 0 0 chr2 204474245 204474273 -46213581 + (CA)n Simple_repeat Simple_repeat 1 28 0 469 272 158 6 chr2 204475386 204475573 -46212281 + MIR SINE MIR 38 250 -12 2184 131 3 10 chr2 204476494 204476808 -46211046 - AluSq SINE Alu -1 312 1 308 185 35 127 chr2 204477319 204477492 -46210362 - MER103 DNA DNA -7 159 3 944 156 40 52 chr2 204477612 204477762 -46210092 + FAM SINE Alu 1 150 -161 2160 135 0 0 chr2 204477762 204478058 -46209796 - AluSp SINE Alu -17 296 1 944 156 40 52 chr2 204478058 204478080 -46209774 + FAM SINE Alu 150 171 -4 202 54 27 27 chr2 204478784 204478821 -46209033 + (TA)n Simple_repeat Simple_repeat 2 38 0 997 244 14 0 chr2 204479005 204479226 -46208628 + MER58A DNA MER1_type 1 224 0 628 213 146 6 chr2 204479235 204479399 -46208455 - MER5A DNA MER1_type -1 188 2 25 0 0 0 chr2 204480270 204480295 -46207559 + AT_rich Low_complexity Low_complexity 1 25 0 312 102 0 0 chr2 204481240 204481289 -46206565 + (TG)n Simple_repeat Simple_repeat 2 50 0 241 267 67 0 chr2 204481327 204481387 -46206467 + L2 LINE L2 3245 3308 -5 21 0 0 0 chr2 204481694 204481715 -46206139 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr2 204481946 204481974 -46205880 + AT_rich Low_complexity Low_complexity 1 28 0 1714 172 44 3 chr2 204482536 204482832 -46205022 + AluJb SINE Alu 1 308 -4 192 77 0 0 chr2 204484323 204484349 -46203505 + (A)n Simple_repeat Simple_repeat 1 26 0 1165 155 91 14 chr2 204484927 204485146 -46202708 - MER46A DNA MER2_type 0 236 1 2058 105 0 14 chr2 204486845 204487181 -46200673 + AluSg SINE Alu 1 332 0 1674 154 0 103 chr2 204487493 204487823 -46200031 - AluJb SINE Alu -16 296 1 706 226 84 16 chr2 204488347 204488537 -46199317 + MIR SINE MIR 3 205 -57 243 242 113 0 chr2 204488565 204488627 -46199227 + MIR SINE MIR 194 262 0 2362 101 0 10 chr2 204488858 204489166 -46198688 + AluSq SINE Alu 1 305 -8 3490 46 0 0 chr2 204489166 204489597 -46198257 + L1PA4 LINE L1 5722 6152 -3 2216 86 3 26 chr2 204490079 204490381 -46197473 + AluSg SINE Alu 5 299 -11 21 57 0 0 chr2 204492514 204492549 -46195305 + AT_rich Low_complexity Low_complexity 1 35 0 1800 188 81 35 chr2 204493019 204493499 -46194355 + MLT1D LTR MaLR 4 505 0 2513 57 0 32 chr2 204493537 204493851 -46194003 - AluSq SINE Alu -9 304 1 207 0 0 0 chr2 204494773 204494796 -46193058 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1025 187 80 77 chr2 204494845 204495171 -46192683 + MER46C DNA MER2_type 1 327 -11 2272 119 0 0 chr2 204495345 204495647 -46192207 - AluSg SINE Alu -1 309 8 1155 333 108 32 chr2 204495840 204496895 -46190959 - L2 LINE L2 -752 2562 1428 21 0 0 0 chr2 204497023 204497044 -46190810 + AT_rich Low_complexity Low_complexity 1 21 0 229 308 106 29 chr2 204497283 204497387 -46190467 + L2 LINE L2 3200 3311 -2 401 269 64 33 chr2 204500266 204500519 -46187335 - L1ME2 LINE L1 -230 5940 5681 524 293 108 9 chr2 204502089 204502321 -46185533 - MIR SINE MIR 0 262 8 23 0 0 0 chr2 204504618 204504641 -46183213 + AT_rich Low_complexity Low_complexity 1 23 0 2165 82 0 3 chr2 204504737 204505043 -46182811 - AluSx SINE Alu 0 305 1 4644 114 95 45 chr2 204505134 204505994 -46181860 - MER4D LTR ERV1 0 903 1 406 225 40 53 chr2 204506226 204506377 -46181477 + L1MC4a LINE L1 5776 5924 -1884 2326 101 0 0 chr2 204506493 204506789 -46181065 - AluSg SINE Alu -14 296 1 4218 134 48 76 chr2 204506789 204507397 -46180457 - MER49 LTR ERV1 -39 884 260 180 0 0 0 chr2 204507397 204507417 -46180437 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 1632 169 43 18 chr2 204507418 204507696 -46180158 - AluJo SINE Alu -27 285 1 4218 134 48 76 chr2 204507696 204507991 -46179863 - MER49 LTR ERV1 -662 261 5 1716 147 28 28 chr2 204508191 204508477 -46179377 - AluJb SINE Alu -22 290 5 545 248 0 26 chr2 204508658 204508775 -46179079 - L2 LINE L2 -12 3301 3188 1014 248 144 41 chr2 204508842 204509306 -46178548 + MLT1H1 LTR MaLR 44 555 0 888 242 100 12 chr2 204509366 204509606 -46178248 + MIR SINE MIR 2 262 0 1162 260 47 69 chr2 204509625 204509708 -46178146 - L2 LINE L2 -208 3105 3022 2548 62 0 3 chr2 204509708 204510014 -46177840 + AluY SINE Alu 1 305 -6 1162 260 47 69 chr2 204510014 204510517 -46177337 - L2 LINE L2 -291 3022 2355 1770 121 109 0 chr2 204510517 204510782 -46177072 + AluSx SINE Alu 1 294 -18 1162 260 47 69 chr2 204510782 204511047 -46176807 - L2 LINE L2 -958 2355 2086 534 257 136 39 chr2 204511104 204511310 -46176544 - L2 LINE L2 -404 2910 2685 392 183 12 0 chr2 204511312 204511394 -46176460 - Charlie1 DNA MER1_type -1073 1688 1606 1815 299 104 41 chr2 204511419 204511448 -46176406 - L2 LINE L2 -641 2673 2647 2954 168 26 78 chr2 204511448 204512176 -46175678 - LTR8 LTR ERV1 -1 690 1 1815 299 104 41 chr2 204512176 204512404 -46175450 - L2 LINE L2 -667 2647 2435 2374 74 0 17 chr2 204512404 204512721 -46175133 - AluY SINE Alu 0 312 1 1815 299 104 41 chr2 204512721 204513363 -46174491 - L2 LINE L2 -879 2435 1715 413 206 143 40 chr2 204514078 204514246 -46173608 - MIR SINE MIR -70 138 8 1997 161 0 3 chr2 204514260 204514565 -46173289 - AluJo SINE Alu -6 306 3 180 77 0 0 chr2 204514776 204514802 -46173052 + (TG)n Simple_repeat Simple_repeat 1 26 0 2349 86 7 7 chr2 204514963 204515265 -46172589 + AluSx SINE Alu 4 305 -7 2287 56 0 3 chr2 204515639 204515946 -46171908 + AluY SINE Alu 1 306 0 27 49 0 0 chr2 204516496 204516537 -46171317 + AT_rich Low_complexity Low_complexity 1 41 0 337 122 0 211 chr2 204517442 204517502 -46170352 + MER96B DNA MER1_type? 242 251 -166 2297 104 0 7 chr2 204517502 204517811 -46170043 - AluSx SINE Alu -5 307 1 337 122 0 211 chr2 204517811 204517906 -46169948 + MER96B DNA MER1_type? 251 364 -53 229 242 22 11 chr2 204517986 204518077 -46169777 + CT-rich Low_complexity Low_complexity 2 93 0 2236 128 0 0 chr2 204519304 204519610 -46168244 - AluSq SINE Alu -5 308 3 224 305 241 28 chr2 204519616 204519757 -46168097 + MIR SINE MIR 49 219 -43 333 267 70 0 chr2 204519890 204519976 -46167878 + MIR SINE MIR 16 107 -155 3017 143 41 22 chr2 204520463 204521003 -46166851 - MER44D DNA MER2_type 0 605 1 2432 95 3 0 chr2 204521655 204521960 -46165894 + AluSq SINE Alu 1 306 -7 2276 111 0 0 chr2 204522271 204522577 -46165277 - AluSx SINE Alu -6 306 1 423 266 97 13 chr2 204522578 204522732 -46165122 + MIR SINE MIR 72 238 -24 1496 209 73 137 chr2 204522928 204523242 -46164612 - L1MC5 LINE L1 -86 7875 7542 1818 188 10 0 chr2 204523242 204523550 -46164304 - AluJo SINE Alu -1 311 1 1496 209 73 137 chr2 204523550 204524700 -46163154 - L1MC5 LINE L1 -419 7542 6476 264 255 245 0 chr2 204524753 204524851 -46163003 + MER34 LTR ERV1 1 122 -420 * 1383 207 59 52 chr2 204524841 204525281 -46162573 + MER39 LTR ERV1 265 707 0 899 168 0 0 chr2 204525337 204525480 -46162374 - FLAM_C SINE Alu 0 143 1 521 203 34 0 chr2 204525519 204525637 -46162217 - L1MC5 LINE L1 -1907 5901 5780 555 78 13 0 chr2 204526042 204526119 -46161735 - MADE1 DNA Mariner 0 80 3 199 140 40 0 chr2 204526141 204526191 -46161663 + CT-rich Low_complexity Low_complexity 2 53 0 835 123 8 0 chr2 204526193 204526315 -46161539 - FRAM SINE Alu 0 176 54 911 175 25 0 chr2 204526829 204526989 -46160865 + FAM SINE Alu 1 41 -8 686 148 49 8 chr2 204527052 204527174 -46160680 + AluJo SINE Alu 9 135 -177 1434 208 27 0 chr2 204527176 204527470 -46160384 + AluJo SINE Alu 3 304 -8 26 30 0 0 chr2 204527558 204527591 -46160263 + AT_rich Low_complexity Low_complexity 1 33 0 2591 53 0 0 chr2 204527664 204527966 -46159888 + AluY SINE Alu 1 302 -9 180 176 0 0 chr2 204527991 204528025 -46159829 + CT-rich Low_complexity Low_complexity 2 35 0 223 235 37 62 chr2 204530457 204530538 -46157316 - MIR3 SINE MIR -22 186 108 24 0 0 0 chr2 204531152 204531176 -46156678 + AT_rich Low_complexity Low_complexity 1 24 0 805 41 0 0 chr2 204531176 204531273 -46156581 + HY3 scRNA scRNA 2 98 -3 252 77 0 0 chr2 204531401 204531440 -46156414 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 558 141 0 0 chr2 204531451 204531536 -46156318 - AluSg/x SINE Alu -44 268 184 275 293 15 56 chr2 204532215 204532413 -46155441 + L2 LINE L2 2844 3033 -280 922 103 29 7 chr2 204532424 204532560 -46155294 + AluSg/x SINE Alu 158 296 -16 337 297 145 0 chr2 204532734 204532872 -46154982 + L1MC/D LINE L1 5313 5470 -2338 2283 164 16 0 chr2 204532899 204533332 -46154522 + L1MC3 LINE L1 6861 7300 -485 2313 88 10 3 chr2 204533332 204533637 -46154217 - AluSx SINE Alu -5 307 1 2475 58 0 0 chr2 204533649 204533944 -46153910 - AluY SINE Alu -16 295 1 748 310 22 25 chr2 204534110 204534384 -46153470 - L2 LINE L2 -426 2888 2616 2346 102 0 3 chr2 204534385 204534698 -46153156 + AluSx SINE Alu 1 312 0 194 365 16 0 chr2 204535283 204535346 -46152508 - L2 LINE L2 -8 3264 3201 709 287 73 12 chr2 204535508 204535755 -46152099 + MIR SINE MIR 1 262 0 221 304 76 13 chr2 204536000 204536079 -46151775 - L2 LINE L2 -20 3252 3169 2026 106 4 0 chr2 204537444 204537709 -46150145 - AluSq SINE Alu -11 302 37 330 263 11 42 chr2 204537872 204537967 -46149887 - L2 LINE L2 -15 3298 3207 397 240 93 31 chr2 204538335 204538464 -46149390 - MIR SINE MIR -77 185 49 4509 120 21 37 chr2 204538618 204539194 -46148660 - L1PA16 LINE L1 -5 6161 5600 3017 158 2 4 chr2 204539194 204539681 -46148173 + MER66B LTR ERV1 1 486 0 4509 120 21 37 chr2 204539681 204539920 -46147934 - L1PA16 LINE L1 -566 5600 5359 288 306 10 0 chr2 204540083 204540181 -46147673 - MIR SINE MIR -112 150 52 425 302 105 17 chr2 204540609 204540781 -46147073 - L2 LINE L2 -1 3271 3085 1165 253 73 78 chr2 204541398 204541451 -46146403 - L2 LINE L2 -13 3300 3248 227 31 31 0 chr2 204541451 204541483 -46146371 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1165 253 73 78 chr2 204541483 204542215 -46145639 - L2 LINE L2 -65 3248 2507 493 262 30 43 chr2 204542257 204542553 -46145301 + Charlie7 DNA MER1_type 371 735 -1877 414 330 31 16 chr2 204542937 204543131 -46144723 - MIR SINE MIR -48 214 18 187 273 50 71 chr2 204543135 204543234 -46144620 - L2 LINE L2 -9 3304 3208 1104 296 101 4 chr2 204543454 204543930 -46143924 - MLT1K LTR MaLR -57 531 10 2175 97 0 33 chr2 204544175 204544475 -46143379 - AluSx SINE Alu -22 290 1 185 65 32 0 chr2 204546355 204546386 -46141468 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 204 163 23 0 chr2 204546825 204546868 -46140986 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 250 372 131 7 chr2 204546868 204547005 -46140849 - L2 LINE L2 0 3272 3119 2086 126 3 3 chr2 204547527 204547829 -46140025 + AluSg SINE Alu 1 302 -8 462 324 38 81 chr2 204547944 204548450 -46139404 - L2 LINE L2 -1937 1377 894 241 314 186 0 chr2 204548460 204548562 -46139292 - L2 LINE L2 -24 3289 3169 2631 43 3 0 chr2 204548673 204548976 -46138878 + AluY SINE Alu 1 304 -7 757 198 34 61 chr2 204549135 204549398 -46138456 - MER112 DNA MER1_type 0 256 1 223 348 14 0 chr2 204549411 204549480 -46138374 - MIR SINE MIR -116 146 77 1882 176 3 0 chr2 204549658 204549954 -46137900 + AluJo SINE Alu 1 297 -15 755 245 0 0 chr2 204550103 204550254 -46137600 - FRAM SINE Alu -14 162 12 320 283 20 0 chr2 204550322 204550421 -46137433 - MER5A DNA MER1_type -85 104 4 552 317 119 37 chr2 204550520 204551009 -46136845 - L2 LINE L2 -816 2498 1970 1725 169 142 14 chr2 204551189 204551556 -46136298 - MER21B LTR ERV1 -449 414 1 278 340 0 10 chr2 204551578 204551678 -46136176 - L2 LINE L2 -563 2751 2653 640 336 79 6 chr2 204551914 204552244 -46135610 - L2 LINE L2 -833 2481 2128 29 28 0 0 chr2 204552256 204552292 -46135562 + AT_rich Low_complexity Low_complexity 1 36 0 2142 136 0 3 chr2 204552292 204552602 -46135252 - AluSx SINE Alu -3 309 1 970 106 15 0 chr2 204552603 204552735 -46135119 - AluJo SINE Alu -178 134 1 431 262 155 18 chr2 204552776 204552944 -46134910 - L2 LINE L2 -1241 2073 1883 743 354 124 18 chr2 204553028 204553658 -46134196 - L2 LINE L2 -2496 818 122 294 271 172 8 chr2 204554338 204554460 -46133394 + MIR SINE MIR 34 175 -87 2274 116 0 0 chr2 204554543 204554835 -46133019 - AluSx SINE Alu -15 297 6 201 147 0 0 chr2 204556194 204556228 -46131626 + (TTC)n Simple_repeat Simple_repeat 2 35 0 246 136 0 0 chr2 204557018 204557062 -46130792 + (CATA)n Simple_repeat Simple_repeat 4 47 0 398 259 143 9 chr2 204557110 204557222 -46130632 + L2 LINE L2 3137 3263 -9 695 258 118 12 chr2 204557605 204557935 -46129919 - MLT1J LTR MaLR -30 481 117 21 36 0 0 chr2 204558319 204558347 -46129507 + AT_rich Low_complexity Low_complexity 1 28 0 607 147 12 0 chr2 204558357 204558520 -46129334 + (TA)n Simple_repeat Simple_repeat 2 166 0 313 266 11 32 chr2 204558522 204558616 -46129238 - L1MC4 LINE L1 -1339 6703 6612 357 99 37 0 chr2 204558623 204558704 -46129150 + (TA)n Simple_repeat Simple_repeat 1 84 0 1038 94 0 0 chr2 204558704 204558831 -46129023 - AluSg/x SINE Alu -18 292 166 679 195 0 16 chr2 204558957 204559085 -46128769 - FLAM_A SINE Alu -7 126 1 268 325 0 86 chr2 204559302 204559453 -46128401 + MIR3 SINE MIR 19 156 -52 1222 203 58 38 chr2 204559506 204559797 -46128057 + AluJo SINE Alu 1 297 -15 429 206 0 0 chr2 204559798 204559890 -46127964 + GA-rich Low_complexity Low_complexity 2 93 0 817 59 0 17 chr2 204559902 204560020 -46127834 + (GGAA)n Simple_repeat Simple_repeat 1 116 0 1260 151 4 40 chr2 204560663 204560888 -46126966 + MER20 DNA MER1_type 1 217 -2 1612 146 45 45 chr2 204560914 204561201 -46126653 - AluJo SINE Alu -25 287 1 948 27 9 0 chr2 204561445 204561556 -46126298 - AluY SINE Alu -21 290 179 236 200 55 55 chr2 204561574 204561684 -46126170 - L1ME LINE L1 -268 5902 5793 2076 222 53 2 chr2 204561757 204562158 -46125696 + L1MC4 LINE L1 7493 7929 -113 273 57 0 0 chr2 204562158 204562193 -46125661 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 2076 222 53 2 chr2 204562193 204562314 -46125540 + L1MC4 LINE L1 7929 8042 0 441 287 76 95 chr2 204562371 204562467 -46125387 - L1MEd LINE L1 -3408 3132 3036 2096 126 33 0 chr2 204562467 204562769 -46125085 - AluSx SINE Alu 0 312 1 441 287 76 95 chr2 204562769 204562989 -46124865 - L1MEd LINE L1 -3504 3036 2822 593 271 105 12 chr2 204563073 204563624 -46124230 - L1MEd LINE L1 -4559 1981 1391 573 77 13 0 chr2 204563625 204563703 -46124151 - MADE1 DNA Mariner 0 80 2 1848 151 27 9 chr2 204564466 204564804 -46123050 - L1MB4 LINE L1 0 6180 5837 2072 90 11 0 chr2 204565685 204565953 -46121901 - AluSg SINE Alu -16 294 24 874 133 0 53 chr2 204567166 204567317 -46120537 + FLAM_C SINE Alu 1 143 0 2333 116 0 0 chr2 204567361 204567664 -46120190 + AluSx SINE Alu 1 303 -9 853 154 0 22 chr2 204567964 204568100 -46119754 + FLAM_C SINE Alu 1 133 0 29 47 0 0 chr2 204568174 204568217 -46119637 + AT_rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr2 204568340 204568361 -46119493 + (GA)n Simple_repeat Simple_repeat 2 22 0 432 192 152 8 chr2 204568548 204568673 -46119181 + HsTC2 DNA Tc2 6 148 -1750 2325 154 113 49 chr2 204568682 204568705 -46119149 + HsTC2 DNA Tc2 1278 1298 -600 2237 112 7 0 chr2 204568705 204569001 -46118853 + AluSx SINE Alu 1 298 -14 2325 154 113 49 chr2 204569001 204569553 -46118301 + HsTC2 DNA Tc2 1298 1890 -8 1456 129 85 8 chr2 204570358 204570606 -46117248 + AluJb SINE Alu 1 267 -45 1921 148 17 20 chr2 204570865 204571216 -46116638 - L1MB4 LINE L1 -1 6179 5830 510 333 81 5 chr2 204571547 204571757 -46116097 + MIR SINE MIR 31 256 -6 187 331 97 28 chr2 204571791 204571936 -46115918 - L3b LINE CR1 -180 1403 1249 2384 89 0 0 chr2 204572313 204572617 -46115237 - AluSg SINE Alu -6 304 1 573 184 97 9 chr2 204572652 204572766 -46115088 + FLAM_A SINE Alu 5 128 -5 1959 119 45 53 chr2 204573093 204573438 -46114416 - L1M2 LINE L1 -587 5704 5358 1018 168 58 150 chr2 204573438 204573504 -46114350 - MLT1A1 LTR MaLR -2 363 292 2510 93 0 0 chr2 204573504 204573815 -46114039 + AluSx SINE Alu 1 311 -1 1018 168 58 150 chr2 204573815 204574148 -46113706 - MLT1A1 LTR MaLR -73 292 1 1959 119 45 53 chr2 204574148 204574162 -46113692 - L1M2 LINE L1 -933 5358 5345 2175 120 3 0 chr2 204574162 204574453 -46113401 - AluSx SINE Alu -20 292 1 1959 119 45 53 chr2 204574453 204574658 -46113196 - L1M2 LINE L1 -946 5345 5112 2305 69 0 42 chr2 204576374 204576680 -46111174 + AluY SINE Alu 1 293 -18 232 342 44 51 chr2 204576924 204577082 -46110772 + L2 LINE L2 3106 3262 -10 2452 82 0 7 chr2 204578319 204578622 -46109232 - AluSq SINE Alu -12 301 1 2837 7 0 10 chr2 204579436 204579743 -46108111 + AluYb8 SINE Alu 1 304 -14 237 246 18 0 chr2 204579916 204579973 -46107881 - L2 LINE L2 -14 3299 3242 513 190 7 15 chr2 204580828 204580965 -46106889 + CT-rich Low_complexity Low_complexity 1 136 0 184 225 0 0 chr2 204581252 204581292 -46106562 + L3 LINE CR1 178 217 -1360 204 271 106 0 chr2 204583620 204583705 -46104149 + MIR SINE MIR 57 150 -112 2320 103 3 0 chr2 204584046 204584347 -46103507 - AluSx SINE Alu -2 310 9 217 227 0 0 chr2 204584889 204584933 -46102921 + L2 LINE L2 3265 3308 -5 209 283 0 0 chr2 204584930 204584976 -46102878 + MIR SINE MIR 22 67 -141 * 471 269 73 35 chr2 204585048 204585267 -46102587 - MIR SINE MIR -2 260 32 38 22 0 0 chr2 204585856 204585901 -46101953 + AT_rich Low_complexity Low_complexity 1 45 0 330 91 0 0 chr2 204586064 204586108 -46101746 + Alu SINE Alu 1 44 -257 2185 123 3 3 chr2 204586108 204586418 -46101436 + AluSx SINE Alu 1 310 -2 22 35 0 0 chr2 204586484 204586513 -46101341 + AT_rich Low_complexity Low_complexity 1 29 0 206 254 191 16 chr2 204586531 204586657 -46101197 - L2 LINE L2 -2 3311 3164 2243 113 0 3 chr2 204586811 204587113 -46100741 - AluSx SINE Alu -11 301 1 382 98 0 0 chr2 204587144 204587195 -46100659 - Alu SINE Alu -257 51 1 400 336 80 18 chr2 204587229 204587556 -46100298 - L2 LINE L2 -924 2390 2044 2525 93 0 0 chr2 204588102 204588414 -46099440 + AluSx SINE Alu 1 312 0 333 0 0 0 chr2 204588505 204588542 -46099312 + (TG)n Simple_repeat Simple_repeat 2 38 0 248 211 244 24 chr2 204589603 204589726 -46098128 - MIR SINE MIR -6 256 107 1689 169 3 23 chr2 204589839 204590140 -46097714 + AluJo SINE Alu 3 297 -15 347 246 0 79 chr2 204590385 204590499 -46097355 - MIR SINE MIR -112 150 46 548 196 61 37 chr2 204590748 204590911 -46096943 - MIR SINE MIR -62 200 34 7436 43 8 0 chr2 204591094 204592034 -46095820 + L1PA6 LINE L1 5206 6152 -2 1406 164 65 31 chr2 204592921 204593056 -46094798 + AluJo SINE Alu 1 130 -182 185 0 40 0 chr2 204593056 204593081 -46094773 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1406 164 65 31 chr2 204593081 204593238 -46094616 + AluJo SINE Alu 130 303 -9 1778 168 37 0 chr2 204593645 204593943 -46093911 - AluJb SINE Alu -3 309 1 284 381 30 22 chr2 204594013 204594147 -46093707 + L2 LINE L2 3128 3262 -10 1994 171 119 7 chr2 204594166 204594586 -46093268 - MLT1C LTR MaLR 0 467 1 2520 77 0 3 chr2 204596265 204596576 -46091278 + AluSx SINE Alu 1 310 -2 932 209 41 0 chr2 204596614 204596810 -46091044 - MER3 DNA MER1_type -4 205 2 485 201 189 37 chr2 204596886 204597050 -46090804 - MIR SINE MIR -27 235 47 772 269 80 88 chr2 204597797 204598396 -46089458 + L1ME4a LINE L1 5511 6104 -17 2045 134 7 3 chr2 204599292 204599591 -46088263 - AluJb SINE Alu -12 300 1 243 319 89 19 chr2 204600781 204600994 -46086860 + L2 LINE L2 2827 3054 -218 1029 196 16 14 chr2 204601139 204601448 -46086406 - MLT1A1 LTR MaLR -15 350 3 205 288 216 7 chr2 204601457 204601596 -46086258 + L2 LINE L2 3088 3255 -17 1791 155 0 0 chr2 204601874 204602139 -46085715 - AluSx SINE Alu -12 300 36 222 174 0 0 chr2 204602674 204602720 -46085134 + (TG)n Simple_repeat Simple_repeat 2 47 0 192 77 0 0 chr2 204604385 204604411 -46083443 + (CA)n Simple_repeat Simple_repeat 2 27 0 363 96 0 0 chr2 204604660 204604712 -46083142 + (TG)n Simple_repeat Simple_repeat 1 52 0 183 267 0 0 chr2 204605127 204605202 -46082652 + (TG)n Simple_repeat Simple_repeat 1 75 0 186 43 0 0 chr2 204606678 204606701 -46081153 + (TC)n Simple_repeat Simple_repeat 2 24 0 180 277 101 95 chr2 204607064 204607212 -46080642 - L3b LINE CR1 -318 1265 1117 235 359 137 0 chr2 204607281 204607412 -46080442 - L2 LINE L2 -1 3271 3123 233 269 30 0 chr2 204608229 204608296 -46079558 - MIR3 SINE MIR -31 177 109 385 279 72 0 chr2 204608376 204608487 -46079367 - MIR SINE MIR -109 153 35 279 306 24 12 chr2 204608519 204608604 -46079250 - MIR3 SINE MIR -108 100 15 201 39 0 0 chr2 204608761 204608787 -46079067 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 2198 114 3 0 chr2 204608822 204609119 -46078735 - AluSq SINE Alu -15 298 1 380 298 127 65 chr2 204609346 204609873 -46077981 + L1ME4a LINE L1 5484 6043 -78 227 189 57 0 chr2 204611064 204611117 -46076737 + CT-rich Low_complexity Low_complexity 4 59 0 214 346 46 8 chr2 204611900 204612030 -46075824 - MIR SINE MIR 0 262 128 2241 117 3 0 chr2 204612262 204612569 -46075285 + AluSx SINE Alu 1 308 -4 233 319 151 32 chr2 204612708 204612893 -46074961 + L2 LINE L2 2811 3017 -255 360 89 33 0 chr2 204613699 204613764 -46074090 + AluSg/x SINE Alu 206 250 -50 313 162 15 63 chr2 204613757 204613836 -46074018 - AluJ/FLAM SINE Alu -238 64 2 * 404 256 22 0 chr2 204613951 204614041 -46073813 + MER81 DNA DNA 22 113 -1 186 339 0 0 chr2 204615462 204615524 -46072330 - MIR SINE MIR -6 256 195 369 0 0 0 chr2 204616568 204616609 -46071245 + (CA)n Simple_repeat Simple_repeat 1 41 0 435 301 192 5 chr2 204616884 204617087 -46070767 + L3 LINE CR1 428 668 -909 368 199 99 99 chr2 204617110 204617261 -46070593 - MIR SINE MIR -87 175 25 283 264 69 0 chr2 204617653 204617725 -46070129 + L3 LINE CR1 1490 1566 -11 1188 241 76 93 chr2 204618158 204618363 -46069491 + MLT1I LTR MaLR 6 202 -207 1033 161 11 39 chr2 204618363 204618543 -46069311 - FAM SINE Alu 0 175 1 1188 241 76 93 chr2 204618543 204618747 -46069107 + MLT1I LTR MaLR 202 408 -1 981 183 55 20 chr2 204618768 204618970 -46068884 - MER3 DNA MER1_type 0 209 1 1695 82 160 12 chr2 204619718 204619986 -46067868 + AluY SINE Alu 1 304 0 689 195 8 0 chr2 204620024 204620147 -46067707 + FLAM_A SINE Alu 1 124 -9 936 264 89 71 chr2 204620177 204620497 -46067357 - MLT1L LTR MaLR -10 605 267 2279 114 7 0 chr2 204620497 204620803 -46067051 + AluSg SINE Alu 1 308 -2 936 264 89 71 chr2 204620803 204621076 -46066778 - MLT1L LTR MaLR -348 267 1 853 264 20 111 chr2 204621917 204622249 -46065605 + L2 LINE L2 2903 3185 -128 1848 130 0 0 chr2 204622249 204622511 -46065343 - AluSq SINE Alu -2 311 50 853 264 20 111 chr2 204622511 204622629 -46065225 + L2 LINE L2 3185 3312 -1 500 295 48 19 chr2 204622665 204622875 -46064979 + L2 LINE L2 3098 3313 0 735 169 22 143 chr2 204623052 204623218 -46064636 + MIR SINE MIR 52 237 -25 1955 163 0 3 chr2 204623218 204623518 -46064336 + AluJo SINE Alu 1 299 -13 2188 108 3 0 chr2 204623521 204623808 -46064046 + AluSx SINE Alu 1 288 -24 735 169 22 143 chr2 204623808 204623868 -46063986 + MIR SINE MIR 239 254 -8 2471 73 0 13 chr2 204625119 204625434 -46062420 + AluY SINE Alu 1 311 0 2433 121 15 95 chr2 204625600 204625697 -46062157 - Tigger2a DNA MER2_type -2274 434 331 1959 163 0 3 chr2 204625697 204625997 -46061857 - AluJo SINE Alu -13 299 1 2433 121 15 95 chr2 204625997 204626371 -46061483 - Tigger2a DNA MER2_type -2377 331 1 558 0 0 0 chr2 204626371 204626433 -46061421 + (TA)n Simple_repeat Simple_repeat 1 62 0 1429 166 123 7 chr2 204626517 204626794 -46061060 - AluSg1 SINE Alu 0 309 1 180 318 60 53 chr2 204626929 204627080 -46060774 + L2 LINE L2 2286 2437 -877 734 161 0 15 chr2 204627149 204627286 -46060568 + MER5A DNA MER1_type 3 137 -52 525 321 99 67 chr2 204627335 204627391 -46060463 + L2 LINE L2 2621 2674 -598 725 158 171 0 chr2 204627391 204627543 -46060311 - MER5B DNA MER1_type 0 178 1 525 321 99 67 chr2 204627543 204627984 -46059870 + L2 LINE L2 2674 3145 -127 2460 93 3 0 chr2 204627984 204628294 -46059560 - AluSp SINE Alu -2 311 1 525 321 99 67 chr2 204628294 204628427 -46059427 + L2 LINE L2 3145 3272 0 349 286 121 29 chr2 204628592 204628732 -46059122 + MIR SINE MIR 109 261 -1 220 361 176 0 chr2 204628783 204628891 -46058963 + L2 LINE L2 3125 3251 -21 210 274 71 24 chr2 204629014 204629098 -46058756 - MIR3 SINE MIR -1 207 120 270 0 0 0 chr2 204629596 204629626 -46058228 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 180 342 0 76 chr2 204630163 204630242 -46057612 - MIR SINE MIR -167 95 23 685 238 6 25 chr2 204630328 204630488 -46057366 + MIR SINE MIR 38 194 -68 239 351 0 0 chr2 204630629 204630703 -46057151 - MIR SINE MIR -1 261 188 28 0 0 0 chr2 204630754 204630782 -46057072 + AT_rich Low_complexity Low_complexity 1 28 0 2072 93 7 7 chr2 204630782 204631071 -46056783 - AluSx SINE Alu -23 289 1 393 254 22 127 chr2 204631072 204631119 -46056735 - MIR SINE MIR -100 162 112 2149 129 0 0 chr2 204631119 204631430 -46056424 + AluSx SINE Alu 2 312 0 393 254 22 127 chr2 204631430 204631563 -46056291 - MIR SINE MIR -150 112 1 1167 221 109 6 chr2 204631693 204632024 -46055830 + MARNA DNA Mariner 179 543 -43 1888 197 53 66 chr2 204632906 204633109 -46054745 + MLT1D LTR MaLR 1 205 -300 3342 123 61 50 chr2 204633109 204633166 -46054688 - MER4B LTR ERV1 0 610 555 2286 76 0 0 chr2 204633166 204633454 -46054400 + AluSc SINE Alu 1 288 -21 3342 123 61 50 chr2 204633454 204633999 -46053855 - MER4B LTR ERV1 -55 555 1 1888 197 53 66 chr2 204633999 204634307 -46053547 + MLT1D LTR MaLR 205 505 0 507 291 170 31 chr2 204634431 204634817 -46053037 - LTR16A LTR ERVL -6 444 22 576 310 13 53 chr2 204634903 204635129 -46052725 - MIR SINE MIR 0 262 46 226 305 25 45 chr2 204636274 204636330 -46051524 + MIR SINE MIR 67 85 -123 2277 105 0 6 chr2 204636330 204636644 -46051210 - AluSx SINE Alu 0 312 1 226 305 25 45 chr2 204636644 204636709 -46051145 + MIR SINE MIR 85 150 -58 200 208 21 0 chr2 204636888 204636899 -46050955 + (TATATG)n Simple_repeat Simple_repeat 2 11 -39 1213 191 12 45 chr2 204636899 204637145 -46050709 - MER8 DNA MER2_type 0 239 2 200 208 21 0 chr2 204637145 204637181 -46050673 + (TATATG)n Simple_repeat Simple_repeat 11 50 0 225 94 0 0 chr2 204637698 204637730 -46050124 + (TA)n Simple_repeat Simple_repeat 2 33 0 303 93 0 0 chr2 204637731 204637774 -46050080 + (TG)n Simple_repeat Simple_repeat 2 44 0 437 311 75 66 chr2 204637826 204637959 -46049895 - L2 LINE L2 -8 3264 3134 2784 123 39 2 chr2 204637959 204638372 -46049482 - MSTC LTR MaLR 0 428 1 437 311 75 66 chr2 204638372 204638585 -46049269 - L2 LINE L2 -138 3134 2915 2156 109 3 0 chr2 204639371 204639674 -46048180 + AluSx SINE Alu 1 304 -8 414 0 0 0 chr2 204639871 204639917 -46047937 + (CA)n Simple_repeat Simple_repeat 1 46 0 29 0 0 0 chr2 204639969 204639998 -46047856 + AT_rich Low_complexity Low_complexity 1 29 0 705 144 8 8 chr2 204640009 204640134 -46047720 - L1MB8 LINE L1 -6 6172 6048 2153 109 3 0 chr2 204640165 204640468 -46047386 - AluSq SINE Alu -9 304 1 613 187 9 0 chr2 204640469 204640576 -46047278 - FLAM_A SINE Alu -31 111 4 2621 173 42 10 chr2 204640577 204641097 -46046757 - L1MB8 LINE L1 -115 6063 5527 318 304 35 9 chr2 204641549 204641664 -46046190 + MER117 DNA MER1_type 80 197 0 181 306 32 0 chr2 204641692 204641754 -46046100 - MIR SINE MIR -93 115 52 576 155 48 0 chr2 204642305 204642408 -46045446 + L1MB3 LINE L1 6075 6182 -1 29 28 0 0 chr2 204642574 204642610 -46045244 + AT_rich Low_complexity Low_complexity 1 36 0 1842 135 0 0 chr2 204642627 204642908 -46044946 - AluSx SINE Alu -27 285 5 1972 124 7 0 chr2 204642939 204643237 -46044617 + AluSq SINE Alu 5 304 -9 258 227 182 11 chr2 204643305 204643393 -46044461 - L2 LINE L2 -25 3247 3145 896 160 21 103 chr2 204644263 204644582 -46043272 - L1MB7 LINE L1 0 6180 5902 33 25 0 0 chr2 204644582 204644622 -46043232 + AT_rich Low_complexity Low_complexity 1 40 0 458 264 60 60 chr2 204644625 204644685 -46043169 - L1ME4a LINE L1 -157 5964 5905 1728 192 6 0 chr2 204644685 204645018 -46042836 - L1MB7 LINE L1 -278 5906 5572 2982 121 141 24 chr2 204645088 204645634 -46042220 + MER4B LTR ERV1 1 610 0 240 163 0 0 chr2 204646966 204647009 -46040845 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 318 288 88 0 chr2 204647621 204647746 -46040108 + MIR SINE MIR 111 246 -16 406 211 31 67 chr2 204647975 204648169 -46039685 + L1MC5 LINE L1 7472 7658 -303 831 113 8 8 chr2 204648169 204648293 -46039561 + AluSq/x SINE Alu 1 124 -189 555 197 112 76 chr2 204648327 204648576 -46039278 + L1MC5 LINE L1 7645 7902 -59 283 309 92 26 chr2 204649495 204649640 -46038214 + MIR SINE MIR 20 174 -88 381 279 76 56 chr2 204649640 204649901 -46037953 + MIR SINE MIR 1 262 0 598 180 0 36 chr2 204649927 204650038 -46037816 + U6 snRNA snRNA 1 107 0 1969 137 3 6 chr2 204650423 204650736 -46037118 - AluJb SINE Alu 0 312 1 209 32 0 32 chr2 204650739 204650770 -46037084 + (TTTTTG)n Simple_repeat Simple_repeat 4 33 0 198 0 0 0 chr2 204650841 204650863 -46036991 + (A)n Simple_repeat Simple_repeat 1 22 0 278 150 0 0 chr2 204651675 204651715 -46036139 + 5S rRNA rRNA 1 40 -81 541 317 78 22 chr2 204652091 204652321 -46035533 + MIR SINE MIR 20 262 0 245 318 109 46 chr2 204652545 204652698 -46035156 - MIR SINE MIR -67 141 30 390 341 115 14 chr2 204653621 204653838 -46034016 + L3b LINE CR1 1214 1452 -131 1003 246 49 2 chr2 204654912 204655150 -46032704 + MIR SINE MIR 3 250 -12 408 341 69 0 chr2 204655375 204655548 -46032306 + MIR3 SINE MIR 15 199 -9 222 37 0 0 chr2 204655584 204655611 -46032243 + (TG)n Simple_repeat Simple_repeat 2 28 0 404 134 45 0 chr2 204656984 204657051 -46030803 + MLT1D LTR MaLR 1 70 -435 1357 167 4 17 chr2 204657089 204657328 -46030526 - MER50 LTR ERV1 -38 696 461 2270 130 33 28 chr2 204657330 204657692 -46030162 - THE1B LTR MaLR 0 364 1 * 2951 136 33 2 chr2 204657692 204658141 -46029713 - MER50 LTR ERV1 -271 463 1 2096 187 28 28 chr2 204658141 204658574 -46029280 + MLT1D LTR MaLR 67 499 -6 239 125 0 0 chr2 204658745 204658777 -46029077 - L2 LINE L2 -11 3261 3230 * 462 291 109 0 chr2 204658751 204658916 -46028938 - MIR SINE MIR -11 251 69 254 281 78 0 chr2 204659057 204659121 -46028733 - L2 LINE L2 0 3313 3245 484 279 42 54 chr2 204659735 204659975 -46027879 - MLT1K LTR MaLR -16 572 336 382 273 57 45 chr2 204660034 204660210 -46027644 - MLT1K LTR MaLR -378 210 33 430 255 51 57 chr2 204661840 204661997 -46025857 - MIR SINE MIR -105 157 2 390 259 109 44 chr2 204663039 204663351 -46024503 + LTR16B LTR ERVL 32 446 -18 1253 214 143 48 chr2 204663412 204663846 -46024008 + MER39 LTR ERV1 233 707 0 503 320 199 34 chr2 204664471 204665451 -46022403 - L2 LINE L2 -424 2890 1749 313 189 91 114 chr2 204665514 204665587 -46022267 - L1MC4 LINE L1 0 8042 7972 2345 88 0 3 chr2 204665587 204665892 -46021962 + AluSx SINE Alu 3 306 -6 313 189 91 114 chr2 204665892 204665950 -46021904 - L1MC4 LINE L1 -70 7972 7914 232 133 0 67 chr2 204666018 204666063 -46021791 - L1MC4 LINE L1 -128 7914 7873 2009 154 182 0 chr2 204666065 204666352 -46021502 - Tigger2 DNA MER2_type -1 2717 2347 186 43 0 0 chr2 204666352 204666375 -46021479 + (GGA)n Simple_repeat Simple_repeat 2 24 0 2009 154 182 0 chr2 204666375 204666456 -46021398 - Tigger2 DNA MER2_type -371 2347 2282 290 270 14 14 chr2 204666440 204666514 -46021340 + MER8 DNA MER2_type 166 239 0 * 364 181 9 69 chr2 204666524 204666640 -46021214 - L1MC4 LINE L1 -180 7862 7754 709 208 32 7 chr2 204666671 204666825 -46021029 - MER39 LTR ERV1 0 707 550 200 237 0 17 chr2 204667098 204667157 -46020697 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 1803 159 7 0 chr2 204667710 204668005 -46019849 - AluJb SINE Alu -14 298 2 433 220 227 8 chr2 204668005 204668137 -46019717 - MIR3 SINE MIR -5 203 43 290 236 55 118 chr2 204668188 204668289 -46019565 + L2 LINE L2 3152 3245 -27 2052 104 3 7 chr2 204668289 204668586 -46019268 - AluSx SINE Alu -16 296 1 290 236 55 118 chr2 204668586 204668611 -46019243 + L2 LINE L2 3245 3270 -2 860 242 63 32 chr2 204668887 204669139 -46018715 + MIR SINE MIR 3 262 0 1652 109 63 0 chr2 204669466 204669705 -46018149 + AluSx SINE Alu 1 254 -58 1554 160 3 60 chr2 204669717 204670035 -46017819 - AluJo SINE Alu -8 304 5 2282 151 87 39 chr2 204670035 204670413 -46017441 + MER34 LTR ERV1 32 439 -103 2006 141 0 0 chr2 204670413 204670710 -46017144 - AluSx SINE Alu -15 297 1 2282 151 87 39 chr2 204670710 204670815 -46017039 + MER34 LTR ERV1 439 538 -4 421 243 65 62 chr2 204670865 204671042 -46016812 - MER92B LTR ERV1 -366 188 1 1144 154 58 46 chr2 204671463 204671723 -46016131 - L1MD3 LINE L1 -2 7993 7731 265 188 101 29 chr2 204672469 204672538 -46015316 + MIR SINE MIR 179 252 -10 354 225 11 0 chr2 204672731 204672820 -46015034 - MIR SINE MIR -53 209 120 1940 144 0 0 chr2 204672835 204673133 -46014721 + AluSg SINE Alu 1 298 -12 1617 166 0 24 chr2 204673424 204673713 -46014141 + AluJb SINE Alu 1 282 -30 1891 151 0 3 chr2 204674103 204674408 -46013446 + AluSx SINE Alu 1 304 -8 533 265 37 47 chr2 204675198 204675496 -46012358 - L1MC5 LINE L1 -48 7913 7619 936 208 22 0 chr2 204675736 204675914 -46011940 - MER5A DNA MER1_type -5 184 3 207 265 82 0 chr2 204676348 204676397 -46011457 + MER91A DNA MER1_type 124 176 -20 434 264 93 7 chr2 204676939 204677079 -46010775 - L2 LINE L2 0 3313 3162 1831 155 7 3 chr2 204677358 204677662 -46010192 - AluSx SINE Alu -7 305 1 209 344 53 8 chr2 204679121 204679252 -46008602 + L2 LINE L2 629 765 -2549 724 253 67 21 chr2 204679625 204679819 -46008035 - MIR SINE MIR -12 250 48 23 0 0 0 chr2 204679878 204679901 -46007953 + AT_rich Low_complexity Low_complexity 1 23 0 273 191 0 0 chr2 204679902 204679949 -46007905 - MER66B LTR ERV1 -142 344 298 243 0 0 0 chr2 204679972 204679999 -46007855 + (TA)n Simple_repeat Simple_repeat 1 27 0 2415 81 3 3 chr2 204679999 204680297 -46007557 - AluSq SINE Alu -11 302 5 2320 56 40 30 chr2 204680695 204680997 -46006857 - AluY SINE Alu -6 305 1 710 192 37 102 chr2 204681064 204681309 -46006545 - L1MA7 LINE L1 -7 6284 6056 455 18 0 0 chr2 204681319 204681376 -46006478 - L1PA6 LINE L1 -5 6149 6093 459 78 0 0 chr2 204681845 204681909 -46005945 + (CA)n Simple_repeat Simple_repeat 1 64 0 575 316 66 18 chr2 204682299 204682571 -46005283 + L1MC/D LINE L1 5501 5785 -2023 268 176 44 77 chr2 204682723 204682814 -46005040 + MIR SINE MIR 56 143 -65 272 308 83 30 chr2 204683960 204684093 -46003761 + MIR3 SINE MIR 18 157 -51 2278 119 0 3 chr2 204684422 204684733 -46003121 + AluSx SINE Alu 1 310 -2 389 293 80 20 chr2 204684894 204685044 -46002810 + MIR3 SINE MIR 43 201 -7 195 42 0 0 chr2 204687060 204687084 -46000770 + (CA)n Simple_repeat Simple_repeat 1 24 0 1725 147 25 25 chr2 204688236 204688521 -45999333 + AluJb SINE Alu 10 294 -18 1155 266 45 11 chr2 204688553 204688597 -45999257 - L1ME3 LINE L1 -2 6164 6123 2152 145 3 3 chr2 204688597 204688907 -45998947 + AluSx SINE Alu 1 310 -2 1155 266 45 11 chr2 204688907 204689258 -45998596 - L1ME3 LINE L1 -43 6123 5766 1852 185 31 31 chr2 204690455 204690845 -45997009 + MLT1B LTR MaLR 1 390 0 1339 250 100 30 chr2 204691565 204692037 -45995817 - MLT1D LTR MaLR 0 505 1 244 264 0 99 chr2 204692972 204693063 -45994791 - MIR3 SINE MIR -5 203 122 246 156 0 0 chr2 204693099 204693144 -45994710 + (CACCAT)n Simple_repeat Simple_repeat 4 48 0 2127 132 21 60 chr2 204693271 204693651 -45994203 + MLT1A1 LTR MaLR 1 365 0 478 292 216 0 chr2 204693810 204693995 -45993859 - MIR SINE MIR -3 259 35 266 309 31 0 chr2 204695048 204695145 -45992709 - MIR SINE MIR -75 187 88 462 219 70 23 chr2 204695914 204696042 -45991812 - MER63 DNA MER1_type -76 760 1 30 27 0 0 chr2 204696362 204696399 -45991455 + AT_rich Low_complexity Low_complexity 1 37 0 2374 78 0 3 chr2 204696409 204696703 -45991151 + AluY SINE Alu 1 293 -18 199 300 17 0 chr2 204697450 204697510 -45990344 - L2 LINE L2 -39 3233 3173 1261 164 27 74 chr2 204697644 204697942 -45989912 - MER58B DNA MER1_type 0 341 58 260 250 18 0 chr2 204698201 204698257 -45989597 - L2 LINE L2 -2 3311 3255 * 356 200 14 0 chr2 204698254 204698324 -45989530 - L2 LINE L2 -235 3078 3008 368 270 155 14 chr2 204698356 204698504 -45989350 - MIR SINE MIR -74 188 20 246 261 14 14 chr2 204698477 204698546 -45989308 + MIR SINE MIR 43 111 -151 * 253 213 21 0 chr2 204698623 204698670 -45989184 - MIR SINE MIR -10 252 205 1017 183 28 64 chr2 204698733 204699073 -45988781 - L2 LINE L2 -223 3090 2763 199 250 0 36 chr2 204699097 204699153 -45988701 + MIR3 SINE MIR 154 207 -1 1107 54 0 0 chr2 204700007 204700137 -45987717 - AluSg/x SINE Alu 0 312 183 888 277 8 32 chr2 204701097 204701346 -45986508 + MIR SINE MIR 15 257 -5 450 0 0 0 chr2 204701378 204701428 -45986426 + (TA)n Simple_repeat Simple_repeat 2 51 0 2178 94 13 28 chr2 204701946 204702264 -45985590 - AluSp SINE Alu 0 313 1 2513 83 0 0 chr2 204702278 204702580 -45985274 - AluSc SINE Alu -7 302 1 555 278 61 25 chr2 204702679 204702877 -45984977 + MIR SINE MIR 58 262 0 614 221 101 0 chr2 204703895 204704044 -45983810 - MIR SINE MIR -70 192 29 317 304 101 7 chr2 204705174 204705312 -45982542 + MIR SINE MIR 34 184 -78 2554 60 0 22 chr2 204705362 204705676 -45982178 + AluY SINE Alu 1 307 -4 538 276 55 0 chr2 204707169 204707314 -45980540 - MIR SINE MIR -62 200 48 400 215 75 11 chr2 204707320 204707413 -45980441 + MIR3 SINE MIR 83 181 -27 180 203 34 51 chr2 204708229 204708288 -45979566 + MIR SINE MIR 89 146 -62 191 284 108 14 chr2 204708983 204709057 -45978797 + MIR SINE MIR 86 167 -41 1830 167 0 19 chr2 204709214 204709352 -45978502 + AluSx SINE Alu 1 140 -172 2271 102 0 0 chr2 204709352 204709647 -45978207 + AluSx SINE Alu 3 297 -15 1830 167 0 19 chr2 204709647 204709820 -45978034 + AluSx SINE Alu 140 306 -6 241 150 0 0 chr2 204710340 204710380 -45977474 - tRNA-Cys-TGC tRNA tRNA -35 40 1 2021 123 3 7 chr2 204710417 204710739 -45977115 - AluSx SINE Alu 0 321 1 23 0 0 0 chr2 204710843 204710866 -45976988 + AT_rich Low_complexity Low_complexity 1 23 0 2505 86 0 0 chr2 204710874 204711178 -45976676 + AluSx SINE Alu 1 304 -8 1207 159 41 10 chr2 204711179 204711374 -45976480 + AluJb SINE Alu 84 284 -28 29 60 0 0 chr2 204711384 204711434 -45976420 + AT_rich Low_complexity Low_complexity 1 50 0 856 274 192 6 chr2 204711434 204712115 -45975739 - L2 LINE L2 0 3313 2494 2100 109 0 3 chr2 204712193 204712503 -45975351 - AluSx SINE Alu 0 309 1 981 206 0 0 chr2 204712699 204712864 -45974990 + FAM SINE Alu 6 170 -15 2143 104 7 20 chr2 204713063 204713361 -45974493 + AluSx SINE Alu 3 296 -16 2432 78 0 16 chr2 204713383 204713689 -45974165 + AluY SINE Alu 1 301 -10 363 310 81 15 chr2 204714214 204714364 -45973490 - MIR3 SINE MIR -48 160 2 842 279 128 36 chr2 204714432 204714877 -45972977 - MLT1K LTR MaLR -76 512 27 180 0 0 0 chr2 204715133 204715153 -45972701 + (GA)n Simple_repeat Simple_repeat 2 21 0 2152 145 3 0 chr2 204715153 204715464 -45972390 + AluSx SINE Alu 1 312 0 1838 183 30 33 chr2 204715561 204715927 -45971927 + MLT1A1 LTR MaLR 1 365 0 192 135 0 0 chr2 204716001 204716038 -45971816 + (CTCA)n Simple_repeat Simple_repeat 3 39 0 197 317 146 34 chr2 204716069 204716337 -45971517 - L2 LINE L2 -61 3211 2914 315 283 10 1 chr2 204716728 204716837 -45971017 + L1ME1 LINE L1 5463 5574 -600 2371 99 0 3 chr2 204716850 204717154 -45970700 - AluSc SINE Alu -1 308 6 336 316 19 19 chr2 204717205 204717363 -45970491 + L1ME1 LINE L1 5724 5881 -285 568 242 92 66 chr2 204717443 204717670 -45970184 + L2 LINE L2 3077 3309 -4 191 250 102 102 chr2 204718389 204718497 -45969357 - MER5A DNA MER1_type -67 122 15 21 0 0 0 chr2 204719093 204719114 -45968740 + AT_rich Low_complexity Low_complexity 1 21 0 2000 141 0 10 chr2 204720249 204720546 -45967308 - AluJb SINE Alu -18 294 1 2061 128 0 0 chr2 204720735 204721008 -45966846 + AluSx SINE Alu 1 273 -39 2386 78 0 29 chr2 204721137 204721443 -45966411 + AluSq SINE Alu 1 297 -16 556 245 92 62 chr2 204722610 204722871 -45964983 + MIR SINE MIR 2 262 0 21 0 0 0 chr2 204723321 204723342 -45964512 + AT_rich Low_complexity Low_complexity 1 21 0 195 100 0 0 chr2 204723377 204723407 -45964447 + (T)n Simple_repeat Simple_repeat 1 30 0 1909 144 29 32 chr2 204723456 204723769 -45964085 - AluJb SINE Alu 0 312 1 736 129 138 0 chr2 204723920 204724036 -45963818 + FLAM_C SINE Alu 2 133 0 2142 127 13 22 chr2 204725309 204725625 -45962229 + AluSq SINE Alu 1 313 0 1154 126 12 0 chr2 204725900 204726067 -45961787 - AluSg/x SINE Alu -12 300 132 2300 98 0 16 chr2 204726285 204726592 -45961262 + AluSp SINE Alu 1 302 -11 1963 131 0 7 chr2 204726622 204726896 -45960958 + AluJb SINE Alu 25 296 -16 2414 84 3 0 chr2 204726900 204727197 -45960657 + AluSg SINE Alu 1 298 -12 2224 122 0 3 chr2 204727199 204727502 -45960352 + AluSq SINE Alu 1 302 -11 2070 151 3 3 chr2 204729193 204729505 -45958349 + AluSx SINE Alu 1 312 0 2054 142 3 0 chr2 204730785 204731096 -45956758 - AluSx SINE Alu 0 312 1 385 273 8 23 chr2 204731170 204731302 -45956552 + LTR67 LTR ERVL 428 557 0 250 314 59 29 chr2 204731719 204731821 -45956033 - L2 LINE L2 -32 3240 3136 344 258 0 11 chr2 204732289 204732378 -45955476 + MLT1K LTR MaLR 3 90 -498 417 261 13 26 chr2 204732537 204732690 -45955164 + LTR67 LTR ERVL 402 552 -5 414 308 78 9 chr2 204732739 204732925 -45954929 - MIR3 SINE MIR -5 203 1 666 224 0 0 chr2 204732955 204733080 -45954774 + MER58B DNA MER1_type 217 341 0 * 1024 173 56 0 chr2 204733080 204733276 -45954578 - MER58B DNA MER1_type -113 228 22 230 233 0 17 chr2 204733303 204733363 -45954491 + MLT1K LTR MaLR 528 586 -2 187 312 258 11 chr2 204733376 204733469 -45954385 - L2 LINE L2 -14 3258 3143 668 296 88 21 chr2 204733484 204733724 -45954130 - MIR SINE MIR 0 262 7 733 187 8 15 chr2 204734423 204734557 -45953297 + FLAM_A SINE Alu 1 133 0 698 156 30 0 chr2 204734610 204734777 -45953077 + GA-rich Low_complexity Low_complexity 2 173 0 1752 120 28 65 chr2 204734829 204735153 -45952701 + AluSx SINE Alu 1 312 0 1875 241 88 54 chr2 204735164 204735907 -45951947 + HAL1b LINE L1 390 1157 -191 638 231 36 107 chr2 204735949 204736037 -45951817 - MIR SINE MIR 0 262 169 1575 132 23 23 chr2 204736037 204736294 -45951560 - AluJb SINE Alu -40 272 16 638 231 36 107 chr2 204736294 204736486 -45951368 - MIR SINE MIR -93 169 2 184 233 47 0 chr2 204737904 204737947 -45949907 + L2 LINE L2 3215 3259 -13 203 267 174 23 chr2 204737958 204738044 -45949810 + L2 LINE L2 3173 3271 -1 2385 69 3 3 chr2 204738675 204738980 -45948874 + AluY SINE Alu 1 305 -6 752 218 170 10 chr2 204739277 204739483 -45948371 + L3 LINE CR1 1253 1491 -86 610 282 6 19 chr2 204739543 204739699 -45948155 + MIR SINE MIR 32 185 -77 470 196 19 37 chr2 204739896 204740003 -45947851 - MER31A LTR ERV1 -28 457 353 211 167 24 0 chr2 204740127 204740169 -45947685 - L2 LINE L2 -5 3308 3266 2119 112 10 0 chr2 204740195 204740490 -45947364 + AluSx SINE Alu 1 298 -14 780 247 58 40 chr2 204741167 204741390 -45946464 - MIR SINE MIR 0 262 36 1929 104 0 47 chr2 204741833 204742130 -45945724 + AluSx SINE Alu 6 288 -24 691 236 84 26 chr2 204742131 204742322 -45945532 + MIR SINE MIR 59 260 -2 338 331 28 35 chr2 204743045 204743207 -45944647 + MIR3 SINE MIR 15 177 -31 2128 78 0 104 chr2 204743226 204743561 -45944293 + AluSg SINE Alu 1 300 -10 1800 164 10 0 chr2 204743598 204743890 -45943964 - AluJb SINE Alu -17 295 1 1830 122 6 67 chr2 204744020 204744155 -45943699 + AluSx SINE Alu 1 143 -169 7928 19 0 0 chr2 204744155 204745050 -45942804 + L1PA3 LINE L1 5258 6152 -3 1830 122 6 67 chr2 204745050 204745242 -45942612 + AluSx SINE Alu 143 308 -4 184 180 120 20 chr2 204745387 204745437 -45942417 - L2 LINE L2 0 3272 3218 359 288 119 51 chr2 204746655 204746832 -45941022 - MIR3 SINE MIR -5 203 15 189 184 204 51 chr2 204746800 204746898 -45940956 - L3b LINE CR1 -228 1355 1243 * 243 242 72 12 chr2 204746948 204747048 -45940806 + MER5B DNA MER1_type 13 145 -44 1736 147 3 7 chr2 204747194 204747487 -45940367 + AluJo SINE Alu 1 292 -20 1350 234 175 19 chr2 204747864 204748292 -45939562 - MLT1J LTR MaLR -9 502 8 258 176 0 0 chr2 204748785 204748836 -45939018 + CT-rich Low_complexity Low_complexity 2 52 0 294 73 0 0 chr2 204749351 204749392 -45938462 + (CA)n Simple_repeat Simple_repeat 1 41 0 2077 103 40 0 chr2 204749502 204749803 -45938051 + AluSq SINE Alu 1 313 0 384 254 31 109 chr2 204749861 204750054 -45937800 - MER5B DNA MER1_type 0 178 1 190 264 75 0 chr2 204750571 204750624 -45937230 + MIR SINE MIR 161 217 -45 2151 77 0 14 chr2 204750668 204750984 -45936870 + AluY SINE Alu 1 312 0 1023 196 50 0 chr2 204751030 204751229 -45936625 - MER63A DNA MER1_type 0 210 2 2603 30 0 0 chr2 204751247 204751550 -45936304 + AluY SINE Alu 1 303 -8 1045 202 116 129 chr2 204752265 204752721 -45935133 + MLT1E LTR MaLR 1 450 -143 991 186 0 0 chr2 204752745 204752922 -45934932 + FRAM SINE Alu 1 172 -4 234 0 0 0 chr2 204754947 204754973 -45932881 + (TG)n Simple_repeat Simple_repeat 1 26 0 230 160 20 0 chr2 204754973 204755023 -45932831 + GA-rich Low_complexity Low_complexity 2 52 0 345 62 0 0 chr2 204756235 204756283 -45931571 + (GGGGA)n Simple_repeat Simple_repeat 2 49 0 181 0 33 33 chr2 204756366 204756396 -45931458 + (CGG)n Simple_repeat Simple_repeat 1 30 0 749 191 0 8 chr2 204758480 204758606 -45929248 + FLAM_A SINE Alu 1 125 -8 2265 101 0 0 chr2 204758695 204759003 -45928851 + AluSc SINE Alu 1 308 -1 255 281 0 0 chr2 204759011 204759075 -45928779 - MIR SINE MIR -13 249 186 225 139 0 0 chr2 204761314 204761357 -45926497 + (TC)n Simple_repeat Simple_repeat 1 43 0 618 271 60 6 chr2 204761390 204761556 -45926298 - MIR SINE MIR -60 202 28 2025 116 36 0 chr2 204761928 204762229 -45925625 - AluSq SINE Alu -1 312 1 569 270 195 23 chr2 204762238 204762753 -45925101 + L2 LINE L2 2696 3313 0 415 309 43 0 chr2 204762965 204763104 -45924750 + L2 LINE L2 3116 3260 -12 407 183 8 25 chr2 204763111 204763231 -45924623 + GA-rich Low_complexity Low_complexity 3 120 0 383 305 134 24 chr2 204763297 204763461 -45924393 - MIR3 SINE MIR -1 207 26 1535 164 16 42 chr2 204763989 204764300 -45923554 + AluJo SINE Alu 1 303 -9 237 261 46 0 chr2 204764476 204764541 -45923313 + MLT1K LTR MaLR 519 586 -2 1416 234 66 42 chr2 204764753 204765205 -45922649 - LTR16B LTR ERVL 0 464 2 398 292 13 45 chr2 204765559 204765713 -45922141 + HsTC2 DNA Tc2 4 152 -1746 * 1130 318 136 2 chr2 204765711 204766226 -45921628 + HsTC2 DNA Tc2 317 900 -998 490 310 26 7 chr2 204766734 204766889 -45920965 - MER117 DNA MER1_type -36 161 4 5628 156 39 56 chr2 204766949 204767401 -45920453 + L1MA4 LINE L1 4094 4552 -1748 985 164 0 0 chr2 204767401 204767572 -45920282 + FRAM SINE Alu 1 171 -5 5628 156 39 56 chr2 204767572 204768161 -45919693 + L1MA4 LINE L1 4552 5150 -1150 2134 107 0 0 chr2 204768161 204768451 -45919403 + AluSx SINE Alu 1 290 -22 5628 156 39 56 chr2 204768451 204769534 -45918320 + L1MA4 LINE L1 5150 6238 -62 833 217 12 0 chr2 204769534 204769695 -45918159 + FRAM SINE Alu 1 163 -3 5628 156 39 56 chr2 204769695 204769749 -45918105 + L1MA4 LINE L1 6238 6291 -9 309 263 15 109 chr2 204769930 204770067 -45917787 - L1MC4 LINE L1 -1339 6703 6580 2176 87 0 13 chr2 204770092 204770392 -45917462 + AluY SINE Alu 2 297 -14 911 94 16 0 chr2 204770489 204770617 -45917237 - FRAM SINE Alu -14 162 33 217 292 42 28 chr2 204770822 204770894 -45916960 + L2 LINE L2 3132 3204 -68 230 0 33 0 chr2 204770957 204770987 -45916867 + (TG)n Simple_repeat Simple_repeat 2 32 0 273 29 0 0 chr2 204771087 204771121 -45916733 + (TC)n Simple_repeat Simple_repeat 2 35 0 * 360 0 0 0 chr2 204771120 204771160 -45916694 + (TG)n Simple_repeat Simple_repeat 1 40 0 2225 91 3 0 chr2 204771161 204771458 -45916396 - AluSp SINE Alu -15 298 1 941 129 55 6 chr2 204771510 204771673 -45916181 + MSTB1 LTR MaLR 215 385 -47 543 256 0 8 chr2 204771909 204772026 -45915828 + MER5B DNA MER1_type 3 118 -60 456 161 85 68 chr2 204772037 204772155 -45915699 - MIR SINE MIR -75 187 68 754 166 0 60 chr2 204772454 204772605 -45915249 - FLAM_C SINE Alu 0 143 2 957 89 0 0 chr2 204773480 204773626 -45914228 + (G)n Simple_repeat Simple_repeat 1 146 0 248 256 24 40 chr2 204773630 204773755 -45914099 + (CGGGG)n Simple_repeat Simple_repeat 1 123 0 1212 188 37 11 chr2 204774001 204774272 -45913582 + AluJb SINE Alu 1 278 -34 1647 139 3 108 chr2 204774415 204774739 -45913115 - AluJb SINE Alu -12 290 1 204 356 69 53 chr2 204775115 204775303 -45912551 + MIR SINE MIR 20 210 -52 650 167 0 0 chr2 204776748 204776856 -45910998 + FLAM_A SINE Alu 34 141 -1 1740 122 45 51 chr2 204776982 204777294 -45910560 - AluSx SINE Alu -2 310 1 592 256 0 0 chr2 204777335 204777460 -45910394 - FLAM_A SINE Alu -12 130 6 3824 159 23 53 chr2 204777466 204777785 -45910069 - L1MB3 LINE L1 -33 6150 5823 2270 78 3 0 chr2 204777785 204778078 -45909776 - AluSx SINE Alu -6 306 13 3824 159 23 53 chr2 204778078 204778508 -45909346 - L1MB3 LINE L1 -360 5823 5424 542 264 51 30 chr2 204778908 204779116 -45908738 - MER20B DNA MER1_type 0 219 4 210 270 24 71 chr2 204781562 204781688 -45906166 + MIR SINE MIR 87 206 -56 282 236 0 66 chr2 204782375 204782481 -45905373 + L2 LINE L2 2986 3084 -188 574 293 20 20 chr2 204782871 204783069 -45904785 - MIR SINE MIR -64 198 1 1293 226 136 44 chr2 204783120 204783598 -45904256 + LTR33A LTR ERVL 2 523 0 833 150 8 0 chr2 204783994 204784121 -45903733 + FLAM_C SINE Alu 3 130 -13 872 282 76 28 chr2 204784206 204784590 -45903264 + L1ME4a LINE L1 5458 5867 -254 1992 136 7 3 chr2 204784590 204784891 -45902963 - AluJo SINE Alu -10 302 1 872 282 76 28 chr2 204784891 204784939 -45902915 + L1ME4a LINE L1 5867 5911 -210 602 319 19 5 chr2 204784954 204785161 -45902693 - MIR SINE MIR -7 255 46 1507 91 0 5 chr2 204785216 204785402 -45902452 + AluSx SINE Alu 1 185 -127 486 294 70 5 chr2 204786237 204786424 -45901430 - MIR SINE MIR -52 210 12 2338 104 0 7 chr2 204786714 204787022 -45900832 + AluSp SINE Alu 1 306 -7 393 240 10 10 chr2 204787024 204787124 -45900730 - MIR SINE MIR -8 254 155 3908 151 14 35 chr2 204787125 204787830 -45900024 - L1MB3 LINE L1 -2 6181 5491 2473 75 3 22 chr2 204787830 204788149 -45899705 - AluSp SINE Alu 0 313 1 3908 151 14 35 chr2 204788149 204788176 -45899678 - L1MB3 LINE L1 -692 5491 5465 684 117 10 10 chr2 204788177 204788280 -45899574 + U13 snRNA snRNA 1 103 -1 1326 144 9 0 chr2 204788291 204788520 -45899334 - L1MB3 LINE L1 -692 5488 5258 906 141 7 7 chr2 204788522 204788657 -45899197 + AluJb SINE Alu 148 282 -30 531 191 9 36 chr2 204788679 204788789 -45899065 - L1MB3 LINE L1 -877 5269 5163 893 120 0 0 chr2 204788791 204788916 -45898938 + AluSg/x SINE Alu 176 300 -12 549 192 17 70 chr2 204788916 204789088 -45898766 - L1MB3 LINE L1 -983 5163 5001 3136 123 24 2 chr2 204789528 204789983 -45897871 - LTR9B LTR ERV1 -179 465 1 2310 108 0 3 chr2 204790011 204790318 -45897536 + AluSx SINE Alu 1 306 -6 1112 163 49 75 chr2 204790378 204790562 -45897292 + MLT1D LTR MaLR 1 188 -317 2452 63 3 7 chr2 204790562 204790861 -45896993 + AluSp SINE Alu 1 298 -15 2248 116 0 3 chr2 204790870 204791180 -45896674 + AluSc SINE Alu 1 309 0 1112 163 49 75 chr2 204791180 204791260 -45896594 + MLT1D LTR MaLR 196 234 -271 1832 224 17 8 chr2 204791260 204791618 -45896236 - MLT1A2 LTR MaLR -2 372 12 972 195 25 20 chr2 204791616 204791816 -45896038 + MLT1D LTR MaLR 305 505 0 * 2025 217 126 42 chr2 204791824 204792342 -45895512 + MER50 LTR ERV1 10 599 -135 2007 137 0 0 chr2 204792342 204792648 -45895206 + AluSg SINE Alu 3 308 0 2025 217 126 42 chr2 204792648 204792795 -45895059 + MER50 LTR ERV1 599 732 -2 585 186 0 0 chr2 204792857 204792954 -45894900 + AluJo SINE Alu 2 98 -214 523 97 36 12 chr2 204792954 204793044 -45894810 - THE1B LTR MaLR 0 355 267 1583 51 10 0 chr2 204793045 204793241 -45894613 + L1PA5 LINE L1 5931 6128 -26 185 0 40 0 chr2 204793244 204793269 -45894585 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 1693 122 73 24 chr2 204793269 204793556 -45894298 - THE1B LTR MaLR -63 301 1 863 211 20 39 chr2 204793556 204793598 -45894256 + AluJo SINE Alu 94 135 -177 2134 119 0 3 chr2 204793598 204793906 -45893948 + AluSq SINE Alu 2 308 0 863 211 20 39 chr2 204793906 204794066 -45893788 + AluJo SINE Alu 135 293 -19 2172 107 0 0 chr2 204794163 204794469 -45893385 - AluSc SINE Alu 0 306 1 346 151 0 0 chr2 204794494 204794547 -45893307 - Alu SINE Alu -3 297 245 766 154 0 31 chr2 204794627 204794757 -45893097 - FLAM_C SINE Alu -7 126 1 25 0 0 0 chr2 204794775 204794800 -45893054 + AT_rich Low_complexity Low_complexity 1 25 0 537 92 13 0 chr2 204794800 204794876 -45892978 - AluSp/q SINE Alu -15 298 222 2310 42 11 11 chr2 204794898 204795228 -45892626 - AluY SINE Alu 0 330 1 593 125 11 0 chr2 204795305 204795393 -45892461 - AluJb SINE Alu -18 294 206 1153 158 14 37 chr2 204795414 204795629 -45892225 + AluSg/x SINE Alu 85 294 -18 354 221 43 94 chr2 204795629 204795883 -45891971 - L1MEc LINE L1 -4747 1649 1409 1145 141 28 6 chr2 204795964 204796141 -45891713 - AluJo SINE Alu -131 181 1 384 301 82 47 chr2 204796144 204796486 -45891368 - L1MEc LINE L1 -5087 1118 765 2430 78 7 0 chr2 204796560 204796866 -45890988 + AluY SINE Alu 1 308 -3 2248 101 3 0 chr2 204797202 204797498 -45890356 - AluSq SINE Alu -16 297 1 2271 135 0 0 chr2 204797505 204797817 -45890037 - AluSx SINE Alu 0 312 1 1048 161 85 62 chr2 204798217 204798347 -45889507 - AluJb SINE Alu -30 282 143 2259 110 0 3 chr2 204798347 204798657 -45889197 - AluSq SINE Alu -4 309 1 1048 161 85 62 chr2 204798657 204798750 -45889104 - AluJb SINE Alu -169 143 54 2229 94 0 14 chr2 204798777 204799088 -45888766 - AluSp SINE Alu 0 307 1 2191 121 3 0 chr2 204799112 204799419 -45888435 - AluSg SINE Alu -2 308 1 1862 136 4 0 chr2 204799989 204800246 -45887608 + AluSx SINE Alu 1 258 -54 259 271 0 14 chr2 204800413 204800483 -45887371 + L2 LINE L2 3207 3275 -38 2197 72 41 3 chr2 204800485 204800777 -45887077 + AluSp SINE Alu 4 306 -7 2263 95 7 13 chr2 204800788 204801092 -45886762 + AluSg SINE Alu 1 302 -8 286 161 54 0 chr2 204801092 204801137 -45886717 + L2 LINE L2 3262 3312 -1 2398 91 3 0 chr2 204801508 204801805 -45886049 + AluSp SINE Alu 1 298 -15 2284 114 0 0 chr2 204801942 204802248 -45885606 + AluSg1 SINE Alu 1 306 -3 448 132 0 0 chr2 204802769 204802837 -45885017 - AluJ/FRAM SINE Alu -16 296 229 2217 104 0 38 chr2 204802884 204803200 -45884654 + AluSx SINE Alu 1 304 -8 724 107 0 0 chr2 204803322 204803425 -45884429 - AluSg/x SINE Alu -20 292 190 2359 101 3 0 chr2 204803614 204803920 -45883934 + AluSp SINE Alu 7 313 0 332 179 36 0 chr2 204804269 204804353 -45883501 + AluJ/FLAM SINE Alu 1 87 -215 287 163 10 22 chr2 204804454 204804520 -45883334 - L1M3 LINE L1 -560 5774 5708 2133 121 10 3 chr2 204804550 204804848 -45883006 - AluSg SINE Alu -10 300 1 243 0 0 0 chr2 204805228 204805255 -45882599 + (T)n Simple_repeat Simple_repeat 1 27 0 432 258 123 13 chr2 204805740 204805895 -45881959 - MER5B DNA MER1_type -3 175 4 216 283 33 11 chr2 204806022 204806114 -45881740 + L2 LINE L2 2711 2804 -510 677 174 0 107 chr2 204806384 204806533 -45881321 - FLAM_A SINE Alu 0 133 1 2313 98 3 0 chr2 204806886 204807183 -45880671 + AluSp SINE Alu 1 298 -15 1902 150 6 19 chr2 204807817 204808131 -45879723 + AluJo SINE Alu 1 310 -2 2128 72 0 8 chr2 204808371 204808634 -45879220 + AluY SINE Alu 35 295 -16 1072 191 5 0 chr2 204808718 204808906 -45878948 - MER5A DNA MER1_type 0 189 1 1312 155 45 100 chr2 204808993 204809303 -45878551 + AluJo SINE Alu 3 295 -17 950 227 22 4 chr2 204809359 204809584 -45878270 + MIR SINE MIR 2 230 -32 2593 78 0 0 chr2 204809585 204809894 -45877960 + AluSc SINE Alu 1 309 0 200 83 0 28 chr2 204810662 204810698 -45877156 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 278 208 368 0 chr2 204811115 204811221 -45876633 + MER5A DNA MER1_type 45 189 0 388 349 12 12 chr2 204811251 204811423 -45876431 + MIR3 SINE MIR 37 208 0 442 352 20 0 chr2 204812263 204812459 -45875395 - MIR SINE MIR -23 239 40 654 125 0 0 chr2 204812559 204812671 -45875183 + (CA)n Simple_repeat Simple_repeat 2 113 0 1733 110 99 0 chr2 204813294 204813567 -45874287 - AluSg SINE Alu -10 300 1 775 234 59 22 chr2 204813567 204813789 -45874065 - MIR SINE MIR -13 249 20 198 309 29 15 chr2 204813883 204813951 -45873903 - MIR3 SINE MIR -25 183 115 195 69 0 0 chr2 204814029 204814058 -45873796 + (CAGTT)n Simple_repeat Simple_repeat 2 30 0 1307 257 45 71 chr2 204814690 204814732 -45873122 + L1ME2 LINE L1 3661 3703 -2443 2371 88 3 0 chr2 204814732 204815039 -45872815 + AluSp SINE Alu 1 308 -5 1307 257 45 71 chr2 204815039 204815408 -45872446 + L1ME2 LINE L1 3703 4049 -2097 2164 120 7 3 chr2 204815408 204815709 -45872145 - AluSq SINE Alu -11 302 1 1307 257 45 71 chr2 204815709 204815984 -45871870 + L1ME2 LINE L1 4049 4330 -1816 1796 206 95 44 chr2 204816044 204816241 -45871613 - L1MC5 LINE L1 -44 7917 7731 887 0 0 0 chr2 204816241 204816339 -45871515 - L1PA3 LINE L1 0 6155 6058 1796 206 95 44 chr2 204816339 204816729 -45871125 - L1MC5 LINE L1 -230 7731 7300 1075 273 118 47 chr2 204816740 204816843 -45871011 + L1ME2 LINE L1 4574 4668 -1496 2313 135 8 45 chr2 204816843 204817222 -45870632 + MLT1A1 LTR MaLR 1 365 0 1075 273 118 47 chr2 204817222 204817646 -45870208 + L1ME2 LINE L1 4668 5060 -1104 2243 109 10 0 chr2 204817646 204817939 -45869915 - AluSx SINE Alu -16 296 1 1075 273 118 47 chr2 204817939 204818678 -45869176 + L1ME2 LINE L1 5060 5935 -229 870 214 146 103 chr2 204818815 204818999 -45868855 - MLT1A1 LTR MaLR 0 365 190 710 195 8 0 chr2 204818999 204819127 -45868727 - FLAM_A SINE Alu -4 129 1 870 214 146 103 chr2 204819127 204819292 -45868562 - MLT1A1 LTR MaLR -175 190 1 2174 122 0 0 chr2 204819359 204819668 -45868186 + AluSx SINE Alu 1 309 0 223 338 0 0 chr2 204820575 204820646 -45867208 + L2 LINE L2 3125 3195 -77 248 238 25 62 chr2 204820646 204820726 -45867128 + L1ME4a LINE L1 5548 5624 -497 2310 84 10 0 chr2 204821436 204821734 -45866120 + AluSp SINE Alu 5 305 -8 1935 143 13 3 chr2 204821985 204822285 -45865569 + AluSx SINE Alu 1 303 -9 373 238 132 72 chr2 204822292 204822421 -45865433 + L1ME4a LINE L1 5690 5810 -311 1861 176 0 0 chr2 204822421 204822711 -45865143 - AluJb SINE Alu -22 290 1 373 238 132 72 chr2 204822711 204822735 -45865119 + L1ME4a LINE L1 5810 5831 -290 1764 180 3 23 chr2 204822735 204823041 -45864813 + AluJo SINE Alu 1 300 -12 373 238 132 72 chr2 204823041 204823235 -45864619 + L1ME4a LINE L1 5831 6059 -62 441 188 218 8 chr2 204823290 204823304 -45864550 - L1MA10 LINE L1 -1 6333 6320 2927 186 83 52 chr2 204823304 204823543 -45864311 - L1ME1 LINE L1 -5 6161 5931 2295 103 13 3 chr2 204823543 204823853 -45864001 - AluSp SINE Alu 0 313 1 2927 186 83 52 chr2 204823853 204824324 -45863530 - L1ME1 LINE L1 -235 5931 5429 1754 176 7 7 chr2 204824579 204824875 -45862979 + AluJb SINE Alu 1 296 -16 1803 102 9 102 chr2 204824910 204825235 -45862619 - AluSx SINE Alu -4 308 14 282 300 126 32 chr2 204825388 204825546 -45862308 - L1ME4a LINE L1 -224 5897 5755 2301 108 0 0 chr2 204825546 204825843 -45862011 + AluSg SINE Alu 1 297 -13 282 300 126 32 chr2 204825843 204825994 -45861860 - L1ME4a LINE L1 -366 5755 5559 2420 83 3 0 chr2 204827674 204827975 -45859879 + AluSx SINE Alu 2 303 -9 587 303 5 72 chr2 204828592 204828754 -45859100 + MER91A DNA MER1_type 1 148 -48 2207 105 0 7 chr2 204828754 204829049 -45858805 - AluSx SINE Alu -19 293 1 587 303 5 72 chr2 204829049 204829094 -45858760 + MER91A DNA MER1_type 148 194 -2 378 279 58 39 chr2 204829983 204830137 -45857717 - MIR SINE MIR -51 211 55 2401 92 0 0 chr2 204830738 204831032 -45856822 - AluSg SINE Alu -16 294 1 282 289 228 7 chr2 204831096 204831245 -45856609 + MER5A DNA MER1_type 7 188 -1 2067 132 14 0 chr2 204831252 204831541 -45856313 + AluJo SINE Alu 1 293 -19 2274 106 0 0 chr2 204832439 204832731 -45855123 + AluSg SINE Alu 1 292 -18 1001 173 0 49 chr2 204832841 204833026 -45854828 + FRAM SINE Alu 1 176 0 455 320 56 15 chr2 204833240 204833437 -45854417 - MIR SINE MIR -57 205 1 2210 109 13 0 chr2 204833894 204834196 -45853658 - AluSp SINE Alu -7 306 1 761 218 23 40 chr2 204834198 204834372 -45853482 - FRAM SINE Alu -14 162 1 279 116 0 0 chr2 204834372 204834415 -45853439 - MER5B DNA MER1_type -130 48 6 197 309 71 0 chr2 204834418 204834502 -45853352 - MIR SINE MIR -21 241 152 240 227 31 52 chr2 204835259 204835356 -45852498 - MIR SINE MIR -10 252 158 2170 130 0 3 chr2 204836202 204836510 -45851344 - AluSg SINE Alu -3 307 1 3504 149 35 31 chr2 204836520 204836678 -45851176 - L1MA5 LINE L1 -2 6298 6142 2320 106 0 13 chr2 204836678 204836989 -45850865 + AluSx SINE Alu 1 307 -5 3504 149 35 31 chr2 204836989 204837506 -45850348 - L1MA5 LINE L1 -158 6142 5620 2651 48 0 3 chr2 204837624 204837936 -45849918 - AluY SINE Alu 0 311 1 408 333 13 0 chr2 204838663 204838813 -45849041 - MIR3 SINE MIR -27 181 30 1039 296 50 41 chr2 204838826 204839021 -45848833 - L2 LINE L2 -17 3296 3104 1789 168 0 13 chr2 204839021 204839324 -45848530 + AluJb SINE Alu 3 301 -11 2355 115 0 0 chr2 204839334 204839639 -45848215 + AluSq SINE Alu 2 306 -7 1039 296 50 41 chr2 204839639 204839915 -45847939 - L2 LINE L2 -217 3096 2810 206 333 50 10 chr2 204840617 204840716 -45847138 + MIR SINE MIR 32 134 -74 1089 140 12 0 chr2 204840725 204840889 -45846965 - AluSg SINE Alu -23 286 121 22 0 0 0 chr2 204840890 204840912 -45846942 + AT_rich Low_complexity Low_complexity 1 22 0 2429 78 7 7 chr2 204841362 204841670 -45846184 - AluSc SINE Alu -1 308 1 2500 67 3 0 chr2 204842147 204842445 -45845409 - AluSp SINE Alu -14 299 1 863 134 31 0 chr2 204843463 204843590 -45844264 - AluSg SINE Alu -179 131 1 1868 143 13 17 chr2 204844084 204844385 -45843469 + AluJo SINE Alu 1 300 -12 24 53 0 0 chr2 204844716 204844754 -45843100 + AT_rich Low_complexity Low_complexity 1 38 0 703 201 178 0 chr2 204844918 204845092 -45842762 - MER3 DNA MER1_type 0 209 5 2495 58 3 3 chr2 204845211 204845506 -45842348 - AluY SINE Alu -15 296 2 2088 160 0 0 chr2 204845508 204845815 -45842039 - AluJb SINE Alu -5 307 1 21 0 0 0 chr2 204845848 204845869 -45841985 + AT_rich Low_complexity Low_complexity 1 21 0 2287 101 0 10 chr2 204847213 204847519 -45840335 + AluSc SINE Alu 1 303 -6 1613 145 3 109 chr2 204849109 204849447 -45838407 - AluSx SINE Alu 0 302 1 21 0 0 0 chr2 204849607 204849628 -45838226 + AT_rich Low_complexity Low_complexity 1 21 0 2382 77 7 7 chr2 204849638 204849938 -45837916 + AluSp SINE Alu 1 300 -13 392 133 27 13 chr2 204850266 204850341 -45837513 + L1MC4 LINE L1 6855 6930 -1112 * 407 236 31 62 chr2 204850335 204850496 -45837358 + L1MC4 LINE L1 7218 7373 -669 813 173 83 6 chr2 204850496 204850652 -45837202 + AluJo SINE Alu 87 254 -58 720 154 0 59 chr2 204850676 204850812 -45837042 - FLAM_A SINE Alu -5 128 1 1916 171 0 13 chr2 204850834 204851007 -45836847 - AluJb SINE Alu -6 306 137 2556 70 0 0 chr2 204851007 204851307 -45836547 - AluSg SINE Alu -10 300 1 1916 171 0 13 chr2 204851307 204851443 -45836411 - AluJb SINE Alu -175 137 1 263 247 65 0 chr2 204851455 204851548 -45836306 + L1MC4 LINE L1 7944 8042 0 231 36 0 0 chr2 204851629 204851657 -45836197 + (CA)n Simple_repeat Simple_repeat 2 29 0 306 239 43 86 chr2 204852401 204852564 -45835290 - MIR SINE MIR -16 246 91 354 125 0 7 chr2 204852837 204852895 -45834959 + AluS SINE Alu 51 100 -202 564 134 0 0 chr2 204853041 204853123 -45834731 + AluSq/x SINE Alu 55 136 -177 1265 118 78 4 chr2 204853125 204853395 -45834459 + AluSx SINE Alu 1 290 -22 2280 116 0 0 chr2 204854477 204854779 -45833075 + AluSg SINE Alu 1 302 -8 2234 106 3 7 chr2 204855129 204855430 -45832424 + AluSx SINE Alu 1 300 -12 2052 134 7 3 chr2 204855472 204855770 -45832084 + AluSg SINE Alu 1 299 -11 344 268 71 27 chr2 204855857 204856040 -45831814 + L1ME3A LINE L1 5114 5304 -842 3312 177 65 16 chr2 204856045 204856264 -45831590 + L1MB7 LINE L1 4777 4984 -1200 2151 136 0 3 chr2 204856264 204856565 -45831289 - AluJb SINE Alu -12 300 1 3312 177 65 16 chr2 204856565 204857395 -45830459 + L1MB7 LINE L1 4984 5889 -295 660 159 28 0 chr2 204857395 204857502 -45830352 + FLAM_C SINE Alu 2 111 -32 217 138 17 35 chr2 204857503 204857561 -45830293 + GA-rich Low_complexity Low_complexity 2 58 0 1534 130 20 51 chr2 204857578 204857610 -45830244 + L1MB7 LINE L1 5878 5909 -275 2231 121 0 3 chr2 204857610 204857916 -45829938 + AluSx SINE Alu 1 305 -7 1534 130 20 51 chr2 204857916 204858176 -45829678 + L1MB7 LINE L1 5909 6161 -23 1984 104 10 30 chr2 204858196 204858494 -45829360 + AluSq SINE Alu 1 292 -21 353 258 98 35 chr2 204858503 204858745 -45829109 + L1ME3A LINE L1 5272 5530 -591 2522 48 0 7 chr2 204858908 204859203 -45828651 + AluY SINE Alu 1 293 -18 641 243 62 0 chr2 204859866 204860043 -45827811 - MER5A DNA MER1_type -1 188 1 2407 71 10 0 chr2 204860213 204860507 -45827347 - AluSp SINE Alu -16 297 1 583 167 0 19 chr2 204860659 204860767 -45827087 + FLAM_A SINE Alu 32 137 -5 2517 89 0 0 chr2 204862023 204862336 -45825518 - AluSq SINE Alu 0 313 1 1804 116 34 41 chr2 204862339 204862632 -45825222 - AluSx SINE Alu -9 303 13 1187 93 0 0 chr2 204862925 204863076 -45824778 + AluSp SINE Alu 148 298 -15 2292 87 0 23 chr2 204863081 204863380 -45824474 + AluY SINE Alu 1 292 -19 22 0 0 0 chr2 204863380 204863402 -45824452 + AT_rich Low_complexity Low_complexity 1 22 0 499 188 36 9 chr2 204863403 204863515 -45824339 + L1MC5 LINE L1 7697 7811 -150 23 54 0 0 chr2 204863559 204863596 -45824258 + AT_rich Low_complexity Low_complexity 1 37 0 2315 98 7 0 chr2 204863602 204863898 -45823956 + AluY SINE Alu 1 298 -13 1470 121 147 11 chr2 204864064 204864329 -45823525 - AluSg SINE Alu -9 301 1 246 317 163 8 chr2 204864676 204864799 -45823055 + MLT1J LTR MaLR 1 142 -369 686 220 38 41 chr2 204865110 204865480 -45822374 + L1ME3A LINE L1 5730 6170 0 2023 92 7 63 chr2 204865764 204865910 -45821944 + AluSp SINE Alu 6 128 -185 2110 95 42 3 chr2 204865910 204866194 -45821660 + AluSc SINE Alu 1 295 -14 2023 92 7 63 chr2 204866194 204866350 -45821504 + AluSp SINE Alu 128 291 -22 21 0 0 0 chr2 204866350 204866371 -45821483 + AT_rich Low_complexity Low_complexity 1 21 0 2032 131 7 0 chr2 204866468 204866758 -45821096 + AluSx SINE Alu 1 292 -20 226 267 17 0 chr2 204867407 204867467 -45820387 + L2 LINE L2 3249 3309 -4 2178 110 3 0 chr2 204867595 204867887 -45819967 + AluSx SINE Alu 8 300 -12 967 214 182 73 chr2 204868385 204868880 -45818974 + MLT1H1 LTR MaLR 5 553 -2 24 0 0 0 chr2 204869282 204869306 -45818548 + AT_rich Low_complexity Low_complexity 1 24 0 1884 124 36 7 chr2 204869311 204869585 -45818269 + AluSx SINE Alu 14 295 -17 1159 74 7 13 chr2 204869774 204869923 -45817931 + AluSg SINE Alu 2 149 -161 180 0 0 0 chr2 204869945 204869965 -45817889 + (A)n Simple_repeat Simple_repeat 1 20 0 1981 133 55 0 chr2 204869983 204870276 -45817578 - AluSx SINE Alu -3 309 1 1655 168 35 7 chr2 204870639 204870924 -45816930 - AluJo SINE Alu -19 293 1 2283 103 0 0 chr2 204870937 204871229 -45816625 - AluSg SINE Alu -17 293 2 1957 150 66 24 chr2 204871262 204871688 -45816166 - Charlie1b DNA MER1_type 0 523 80 2164 72 7 49 chr2 204872228 204872535 -45815319 + AluSg SINE Alu 1 294 -16 2439 51 0 7 chr2 204874278 204874574 -45813280 + AluSq SINE Alu 1 294 -19 469 209 108 44 chr2 204875196 204875354 -45812500 + L1MB8 LINE L1 4784 4951 -1195 774 174 0 96 chr2 204875443 204875621 -45812233 + FRAM SINE Alu 1 161 -5 2188 107 0 29 chr2 204875622 204875932 -45811922 + AluSx SINE Alu 4 304 -8 746 180 0 0 chr2 204875932 204876054 -45811800 + L1MB8 LINE L1 5435 5556 -618 784 186 29 41 chr2 204876060 204876232 -45811622 + FAM SINE Alu 1 170 -15 641 156 0 0 chr2 204876234 204876343 -45811511 + L1MB8 LINE L1 5567 5675 -509 716 220 46 35 chr2 204876345 204876478 -45811376 + FRAM SINE Alu 2 139 -173 1769 176 134 11 chr2 204876478 204876859 -45810995 + MSTA LTR MaLR 1 428 0 716 220 46 35 chr2 204876859 204876898 -45810956 + FRAM SINE Alu 139 176 0 833 169 82 22 chr2 204876951 204877134 -45810720 + L1MB8 LINE L1 5980 6173 -5 2328 76 3 20 chr2 204877308 204877612 -45810242 - AluSg SINE Alu -11 299 1 230 150 50 88 chr2 204877632 204877712 -45810142 - L1M3de LINE L1 -4827 1826 1750 916 157 208 5 chr2 204878114 204878311 -45809543 - L1MC1 LINE L1 -1 6332 6096 2377 97 0 6 chr2 204878311 204878622 -45809232 - AluSx SINE Alu -3 309 1 1546 171 14 27 chr2 204878630 204878923 -45808931 - AluJb SINE Alu -23 289 1 1048 219 19 37 chr2 204878923 204879200 -45808654 - L1M4 LINE L1 -1489 4657 4385 2358 82 0 10 chr2 204879200 204879526 -45808328 - AluSx SINE Alu 0 312 1 1048 219 19 37 chr2 204879526 204879572 -45808282 - L1M4 LINE L1 -1761 4385 4340 335 265 26 40 chr2 204879946 204880097 -45807757 + MER5A DNA MER1_type 2 150 -39 402 69 0 0 chr2 204880150 204880208 -45807646 + (TTGG)n Simple_repeat Simple_repeat 2 59 0 2183 108 0 0 chr2 204880208 204880489 -45807365 - AluSc SINE Alu -28 281 1 258 143 82 0 chr2 204880539 204880588 -45807266 + Alu SINE Alu 1 53 -248 2100 105 14 7 chr2 204880731 204881027 -45806827 + AluSc SINE Alu 2 299 -10 1846 177 0 10 chr2 204881187 204881492 -45806362 + AluJo SINE Alu 5 306 -6 464 262 47 98 chr2 204881551 204881671 -45806183 + L1ME LINE L1 5380 5505 -616 2310 106 36 20 chr2 204881671 204882029 -45805825 + THE1B LTR MaLR 1 364 0 464 262 47 98 chr2 204882029 204882359 -45805495 + L1ME LINE L1 5505 5807 -314 933 87 0 0 chr2 204882359 204882474 -45805380 - AluSg SINE Alu -195 115 1 307 244 26 26 chr2 204882497 204882575 -45805279 - L2 LINE L2 0 3313 3236 247 253 48 0 chr2 204882585 204882668 -45805186 - MLT1J2 LTR MaLR -10 440 354 317 22 44 0 chr2 204882693 204882738 -45805116 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1594 103 0 5 chr2 204882742 204882955 -45804899 - AluY SINE Alu -99 212 1 871 178 92 0 chr2 204883033 204883196 -45804658 - MER58A DNA MER1_type 0 224 47 1177 126 0 0 chr2 204883199 204883374 -45804480 + AluSg/x SINE Alu 131 305 -5 256 264 132 63 chr2 204883432 204883591 -45804263 - MLT1J2 LTR MaLR -192 258 89 1884 127 10 29 chr2 204883655 204883962 -45803892 - AluSg SINE Alu -9 301 1 2242 68 17 0 chr2 204884608 204884903 -45802951 - AluY SINE Alu -11 300 1 802 94 0 16 chr2 204884914 204885042 -45802812 + (TA)n Simple_repeat Simple_repeat 2 127 0 1868 124 3 24 chr2 204885042 204885333 -45802521 - AluSx SINE Alu -27 285 1 452 313 170 37 chr2 204885376 204885535 -45802319 + L2 LINE L2 2629 2765 -507 2131 93 3 3 chr2 204885535 204885824 -45802030 - AluSp SINE Alu -24 289 1 452 313 170 37 chr2 204885824 204886241 -45801613 + L2 LINE L2 2765 3272 0 2134 102 3 3 chr2 204886277 204886580 -45801274 + AluSq SINE Alu 1 303 -10 1927 121 7 0 chr2 204886760 204887081 -45800773 - AluSx SINE Alu 0 323 1 764 164 7 21 chr2 204887882 204888022 -45799832 - FLAM_C SINE Alu 0 143 6 2179 107 0 0 chr2 204888196 204888494 -45799360 + AluSx SINE Alu 1 298 -14 891 145 0 93 chr2 204888573 204888766 -45799088 - AluSp SINE Alu -2 311 137 1773 155 0 19 chr2 204889143 204889453 -45798401 + AluJb SINE Alu 1 304 -8 1388 101 29 5 chr2 204889708 204889917 -45797937 + L1MB2 LINE L1 5957 6170 -1 269 296 0 15 chr2 204889925 204890010 -45797844 - L2 LINE L2 -292 2980 2901 790 263 38 5 chr2 204890844 204891030 -45796824 + MIR SINE MIR 40 231 -31 387 60 0 0 chr2 204891056 204891106 -45796748 + (CCA)n Simple_repeat Simple_repeat 1 50 0 2311 93 6 0 chr2 204891462 204891773 -45796081 + AluSq SINE Alu 1 313 0 229 290 210 0 chr2 204892057 204892157 -45795697 + MER91C DNA MER1_type 20 140 0 1893 123 7 13 chr2 204892625 204892926 -45794928 - AluSx SINE Alu -13 299 1 1990 119 3 13 chr2 204893504 204893807 -45794047 - AluSx SINE Alu -11 301 2 200 143 24 0 chr2 204893849 204893891 -45793963 + GA-rich Low_complexity Low_complexity 1 43 0 193 255 21 0 chr2 204893932 204893979 -45793875 - MIR3 SINE MIR -8 200 153 25 0 0 0 chr2 204894003 204894028 -45793826 + AT_rich Low_complexity Low_complexity 1 25 0 1955 97 20 13 chr2 204894911 204895211 -45792643 + AluSq SINE Alu 1 302 -11 276 279 177 85 chr2 204895543 204895607 -45792247 + L2 LINE L2 1691 1748 -1566 2045 113 0 0 chr2 204895607 204895929 -45791925 - AluY SINE Alu 0 322 1 276 279 177 85 chr2 204895929 204896312 -45791542 + L2 LINE L2 1748 2094 -1220 2316 67 7 0 chr2 204896312 204896612 -45791242 + AluY SINE Alu 1 302 -9 276 279 177 85 chr2 204896612 204896892 -45790962 + L2 LINE L2 2094 2487 -827 913 107 0 0 chr2 204896940 204897062 -45790792 - FLAM_C SINE Alu -9 134 13 1759 153 17 0 chr2 204897171 204897458 -45790396 + AluJb SINE Alu 1 292 -20 21 0 0 0 chr2 204897458 204897479 -45790375 + AT_rich Low_complexity Low_complexity 1 21 0 182 299 129 55 chr2 204897490 204897599 -45790255 + L2 LINE L2 2643 2743 -571 1830 94 72 11 chr2 204897599 204897875 -45789979 + AluSg1 SINE Alu 1 293 -16 182 299 129 55 chr2 204897875 204898076 -45789778 + L2 LINE L2 2743 2976 -338 214 331 190 8 chr2 204898306 204898427 -45789427 + L2 LINE L2 3128 3270 -2 1426 122 61 0 chr2 204899185 204899414 -45788440 + AluSx SINE Alu 1 243 -69 2283 79 3 7 chr2 204899520 204899823 -45788031 - AluSx SINE Alu -10 302 1 998 321 15 6 chr2 204949913 204950237 -45737617 - HERVL40 LTR ERVL -2371 3159 2833 212 383 69 6 chr2 204950539 204950714 -45737140 + MIR SINE MIR 25 210 -52 190 254 119 0 chr2 204951491 204951558 -45736296 - L2 LINE L2 -41 3231 3157 5315 186 17 3 chr2 204951867 204953191 -45734663 + L1P4 LINE L1 4157 5502 -663 28 0 0 0 chr2 204954509 204954537 -45733317 + AT_rich Low_complexity Low_complexity 1 28 0 2144 119 0 3 chr2 204954828 204955114 -45732740 - AluSx SINE Alu -27 285 1 1842 103 30 4 chr2 204955475 204955738 -45732116 + AluSq SINE Alu 1 270 -43 2932 155 94 23 chr2 204956526 204957134 -45730720 - LTR8A LTR ERV1 0 727 77 3853 153 8 8 chr2 204957236 204957944 -45729910 - L1P LINE L1 -2169 3977 3270 658 309 17 7 chr2 204957948 204958243 -45729611 + L1MEc LINE L1 1282 1579 -4817 332 306 156 38 chr2 204958374 204958560 -45729294 + L2 LINE L2 2736 2943 -371 2408 76 0 0 chr2 204958646 204958948 -45728906 - AluY SINE Alu -9 302 1 246 32 0 0 chr2 204958964 204958995 -45728859 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6255 55 41 36 chr2 204958995 204959926 -45727928 - SVA Other Other -19 1367 433 4770 48 0 0 chr2 204960176 204960756 -45727098 - L1PA6 LINE L1 0 6154 5575 566 258 78 64 chr2 204961053 204961503 -45726351 + HAL1 LINE L1 1942 2397 -110 418 205 34 8 chr2 204961721 204961838 -45726016 + L1MEc LINE L1 2860 2979 -3236 2065 144 13 3 chr2 204961855 204962160 -45725694 + AluSx SINE Alu 1 308 -4 1915 148 8 20 chr2 204962160 204962482 -45725372 + L1MEc LINE L1 3371 3689 -2526 1638 128 158 83 chr2 204962482 204962880 -45724974 - MSTA LTR MaLR 0 428 1 1915 148 8 20 chr2 204962880 204962949 -45724905 + L1MEc LINE L1 3689 3757 -2458 550 286 79 26 chr2 204963806 204964149 -45723705 + HAL1b LINE L1 159 519 -829 450 102 0 0 chr2 204964331 204964390 -45723464 + Alu SINE Alu 4 62 -256 459 262 76 46 chr2 204964523 204964760 -45723094 + L1MEc LINE L1 1841 2084 -4312 209 194 0 32 chr2 204964768 204964830 -45723024 + GA-rich Low_complexity Low_complexity 2 61 0 342 313 144 13 chr2 204964860 204965173 -45722681 + L1MEc LINE L1 3140 3493 -2722 387 282 9 0 chr2 204965314 204965424 -45722430 - L1MEc LINE L1 -4132 2264 2154 2243 140 73 9 chr2 204965455 204965877 -45721977 - Tigger2 DNA MER2_type 0 2718 2270 382 123 62 0 chr2 204965864 204965929 -45721925 - Tigger2 DNA MER2_type -2649 69 1 * 989 142 83 68 chr2 204966263 204966468 -45721386 + AluJo SINE Alu 73 280 -32 789 187 14 3 chr2 204966552 204966835 -45721019 + MLT1B LTR MaLR 2 381 -9 183 250 77 0 chr2 204966887 204966939 -45720915 - L2 LINE L2 -3 3269 3214 835 207 7 7 chr2 204966988 204967133 -45720721 - FRAM SINE Alu -31 145 1 265 221 39 0 chr2 204967133 204967210 -45720644 + MER96B DNA MER1_type? 39 118 -299 1156 167 0 0 chr2 204967357 204967531 -45720323 + AluJb SINE Alu 2 175 -137 231 36 0 0 chr2 204967631 204967659 -45720195 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 510 230 43 14 chr2 204967920 204968059 -45719795 + LTR45 LTR ERV1 383 525 0 295 204 222 0 chr2 204969006 204969114 -45718740 + L1ME LINE L1 5536 5667 -454 542 188 143 0 chr2 204969332 204969444 -45718410 - FLAM_A SINE Alu -5 128 1 2259 120 0 0 chr2 204969556 204969857 -45717997 - AluSx SINE Alu -11 301 1 22 0 0 0 chr2 204969998 204970020 -45717834 + AT_rich Low_complexity Low_complexity 1 22 0 201 303 0 15 chr2 204970455 204970521 -45717333 + (CATA)n Simple_repeat Simple_repeat 4 68 0 2682 155 72 26 chr2 204970713 204971280 -45716574 - LTR62 LTR ERVK -126 593 1 3789 119 2 2 chr2 204971505 204972032 -45715822 - MER1A DNA MER1_type 0 527 1 26 0 0 0 chr2 204972068 204972094 -45715760 + AT_rich Low_complexity Low_complexity 1 26 0 228 67 0 0 chr2 204972327 204972357 -45715497 + (TCC)n Simple_repeat Simple_repeat 2 31 0 2445 67 3 0 chr2 204972906 204973206 -45714648 + AluY SINE Alu 1 301 -10 2125 119 0 17 chr2 204973235 204973565 -45714289 + AluSx SINE Alu 13 312 0 15448 27 5 0 chr2 204973935 204975874 -45711980 + L1P LINE L1 2451 4398 -1748 8079 23 5 1 chr2 204975974 204977599 -45710255 - L1PA3 LINE L1 -159 5996 4370 263 229 92 38 chr2 204978111 204978242 -45709612 + MLT1H1-int LTR MaLR 1575 1712 -23 398 242 108 71 chr2 204978255 204978495 -45709359 + MLT1H1 LTR MaLR 6 254 -288 432 0 0 0 chr2 204978579 204978627 -45709227 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 615 245 116 9 chr2 204978696 204978929 -45708925 + MLT1H1 LTR MaLR 291 548 -7 2235 112 0 0 chr2 204980129 204980424 -45707430 - AluSx SINE Alu -17 295 1 421 260 8 41 chr2 204980628 204980751 -45707103 - L2 LINE L2 -41 3272 3154 231 194 37 46 chr2 204980751 204980859 -45706995 + (TA)n Simple_repeat Simple_repeat 1 107 0 306 287 180 61 chr2 204980885 204981232 -45706622 - L2 LINE L2 -224 3089 2634 24 53 0 0 chr2 204981911 204981949 -45705905 + AT_rich Low_complexity Low_complexity 1 38 0 1043 167 12 0 chr2 204982513 204982681 -45705173 - AluJb SINE Alu -17 295 126 522 170 38 28 chr2 204983571 204983677 -45704177 + U6 snRNA snRNA 1 107 0 586 104 60 75 chr2 204983677 204983811 -45704043 + L1MB2 LINE L1 6030 6161 -10 452 208 59 0 chr2 204983839 204983940 -45703914 + L1ME3 LINE L1 6049 6155 -7 24 0 0 0 chr2 204984368 204984392 -45703462 + AT_rich Low_complexity Low_complexity 1 24 0 6675 178 38 19 chr2 204984498 204985246 -45702608 + L1 LINE L1 2723 3455 -2691 2432 66 0 13 chr2 204985246 204985547 -45702307 + AluY SINE Alu 1 297 -14 6675 178 38 19 chr2 204985547 204986359 -45701495 + L1 LINE L1 3455 4314 -1832 1197 226 46 3 chr2 204986355 204986745 -45701109 + L1 LINE L1 2797 3203 -2943 * 852 142 0 0 chr2 204986925 204987045 -45700809 - AluSq/x SINE Alu -192 120 1 484 298 13 7 chr2 204987102 204987253 -45700601 - MLT1I LTR MaLR -190 219 68 184 360 11 11 chr2 204988151 204988240 -45699614 + L2 LINE L2 2404 2492 -822 426 300 110 5 chr2 204988348 204988673 -45699181 - L1MC4a LINE L1 -309 5812 5490 11059 90 24 8 chr2 204988780 204990819 -45697035 + L1PA7 LINE L1 2281 6154 0 1936 133 18 0 chr2 204991411 204991739 -45696115 - AluSx SINE Alu 0 333 1 8757 196 50 10 chr2 204991741 204993583 -45694271 - L1M2c LINE L1 -4869 1920 6 637 23 12 0 chr2 204994496 204994582 -45693272 - L1PA7 LINE L1 -192 5962 5876 866 308 83 74 chr2 204994584 204994887 -45692967 - L1MEd LINE L1 -872 1618 1319 2324 82 0 0 chr2 204994887 204995196 -45692658 - AluSg SINE Alu 0 309 1 866 308 83 74 chr2 204995196 204995402 -45692452 - L1MEd LINE L1 -1171 1319 1116 1800 148 0 4 chr2 204995402 204995666 -45692188 - AluJb SINE Alu -23 289 27 866 308 83 74 chr2 204995666 204996135 -45691719 - L1MEd LINE L1 -1374 1116 518 330 361 76 34 chr2 204996368 204996723 -45691131 - L1MEd LINE L1 -5749 370 1 1109 169 0 0 chr2 204997426 204997598 -45690256 - AluJb SINE Alu -6 306 135 195 42 0 0 chr2 204997598 204997622 -45690232 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1731 161 22 0 chr2 204997623 204997890 -45689964 - AluSx SINE Alu -36 276 4 2002 147 0 19 chr2 204998352 204998650 -45689204 + AluSx SINE Alu 1 294 -18 243 79 0 0 chr2 204998650 204998688 -45689166 + (CA)n Simple_repeat Simple_repeat 2 39 0 279 314 113 32 chr2 205000109 205000294 -45687560 - MIR SINE MIR -52 210 11 431 300 10 0 chr2 205000537 205000637 -45687217 - L2 LINE L2 0 3272 3172 2222 122 3 0 chr2 205001248 205001559 -45686295 + AluSx SINE Alu 1 312 0 2087 121 0 0 chr2 205001757 205002063 -45685791 + AluSx SINE Alu 1 306 0 2229 116 3 0 chr2 205003562 205003856 -45683998 - AluSx SINE Alu -17 295 1 1375 35 0 12 chr2 205004044 205004215 -45683639 + L1PA4 LINE L1 5986 6154 -1 864 217 11 6 chr2 205004956 205005131 -45682723 + MER45A DNA AcHobo 1 176 -2 1055 264 115 13 chr2 205006003 205006644 -45681210 - L2 LINE L2 -31 3282 2564 899 189 136 1 chr2 205006818 205007055 -45680799 - L1MC4 LINE L1 -1292 6738 6459 235 180 20 0 chr2 205007418 205007468 -45680386 + MER5B DNA MER1_type 125 175 -3 2085 150 0 3 chr2 205009845 205010158 -45677696 - AluSx SINE Alu 0 312 1 1312 192 48 16 chr2 205010541 205010601 -45677253 + MLT1A1 LTR MaLR 1 58 -307 2294 107 0 0 chr2 205010601 205010900 -45676954 + AluSx SINE Alu 1 299 -13 1312 192 48 16 chr2 205010900 205011151 -45676703 + MLT1A1 LTR MaLR 58 322 -43 293 214 0 0 chr2 205011422 205011478 -45676376 + L1ME4a LINE L1 5524 5579 -542 317 237 206 12 chr2 205011558 205011879 -45675975 + L1ME4a LINE L1 5737 6119 -2 250 389 94 7 chr2 205011944 205012093 -45675761 - MIR3 SINE MIR -28 180 19 23 54 0 0 chr2 205012525 205012562 -45675292 + AT_rich Low_complexity Low_complexity 1 37 0 831 157 0 15 chr2 205015606 205015740 -45672114 - FLAM_A SINE Alu -1 132 1 1115 241 73 24 chr2 205016577 205016917 -45670937 - L2 LINE L2 -1 3312 2956 484 204 65 0 chr2 205017461 205017569 -45670285 - L2 LINE L2 -2773 541 427 407 245 112 0 chr2 205017603 205017746 -45670108 - MER63 DNA MER1_type -277 784 1 823 220 242 3 chr2 205017746 205018064 -45669790 - L2 LINE L2 -2883 431 38 354 280 21 56 chr2 205018465 205018608 -45669246 - MER5A DNA MER1_type -7 182 45 205 192 0 19 chr2 205019076 205019128 -45668726 + GA-rich Low_complexity Low_complexity 2 52 0 2189 113 3 0 chr2 205019356 205019649 -45668205 - AluSx SINE Alu -18 294 1 288 281 219 7 chr2 205019760 205019906 -45667948 - MIR SINE MIR -60 202 26 327 276 69 0 chr2 205019935 205020022 -45667832 + MIR3 SINE MIR 68 160 -48 373 264 36 43 chr2 205020028 205020168 -45667686 - MER5A DNA MER1_type -6 183 45 342 261 109 51 chr2 205020047 205020185 -45667669 + MER5A DNA MER1_type 37 182 -7 * 282 179 0 0 chr2 205020329 205020385 -45667469 + (TG)n Simple_repeat Simple_repeat 2 57 0 418 270 22 96 chr2 205021024 205021202 -45666652 + MER5A DNA MER1_type 19 183 -6 326 23 23 0 chr2 205021271 205021314 -45666540 + (CA)n Simple_repeat Simple_repeat 1 44 0 522 279 142 4 chr2 205022261 205022494 -45665360 - MLT1H1 LTR MaLR 0 555 291 515 180 41 0 chr2 205022554 205022676 -45665178 - MER96B DNA MER1_type? -289 128 2 404 285 16 8 chr2 205022677 205022800 -45665054 - MLT1H1 LTR MaLR -424 131 8 535 308 99 7 chr2 205023563 205023836 -45664018 + L1MC4 LINE L1 7187 7484 -558 2008 138 23 3 chr2 205023836 205024141 -45663713 + AluJo SINE Alu 1 311 -1 249 250 12 36 chr2 205024145 205024229 -45663625 + L1MC5 LINE L1 7311 7392 -569 1857 149 0 34 chr2 205024398 205024516 -45663338 + AluJb SINE Alu 1 122 -190 181 29 59 29 chr2 205024516 205024550 -45663304 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1857 149 0 34 chr2 205024550 205024752 -45663102 + AluJb SINE Alu 122 310 -2 259 255 74 29 chr2 205024752 205024995 -45662859 + L1MC4 LINE L1 7698 7951 -91 539 188 0 0 chr2 205025393 205025510 -45662344 + L1ME LINE L1 955 1071 -5134 317 284 47 53 chr2 205025511 205025680 -45662174 + L1ME LINE L1 1826 1993 -4403 3396 143 75 16 chr2 205025973 205026666 -45661188 - L1MA7 LINE L1 -1 6290 5557 1233 117 0 10 chr2 205026667 205026872 -45660982 - Tigger4(Zombi) DNA MER2_type -2 2729 2527 456 253 178 15 chr2 205027504 205027706 -45660148 + MIR SINE MIR 21 255 -7 277 320 72 118 chr2 205028737 205029221 -45658633 - L2 LINE L2 0 3272 2811 675 244 169 14 chr2 205029224 205029437 -45658417 + MIR SINE MIR 14 259 -3 22 0 0 0 chr2 205029437 205029459 -45658395 + AT_rich Low_complexity Low_complexity 1 22 0 11021 166 21 8 chr2 205029544 205029702 -45658152 + ERVL LTR ERVL 972 1126 -4638 1746 161 45 3 chr2 205029702 205029994 -45657860 - AluJb SINE Alu -8 304 1 11021 166 21 8 chr2 205029994 205031764 -45656090 + ERVL LTR ERVL 1126 2925 -2839 3519 143 9 2 chr2 205031887 205032462 -45655392 + L1PA15 LINE L1 5587 6165 0 4860 163 18 11 chr2 205032464 205033974 -45653880 + L1MA7 LINE L1 4314 5834 -457 2516 58 3 10 chr2 205034477 205034790 -45653064 - AluY SINE Alu 0 311 1 1475 298 80 38 chr2 205034943 205035732 -45652122 - L2 LINE L2 -66 3247 2412 219 316 51 20 chr2 205035759 205035857 -45651997 + L2 LINE L2 3171 3271 -42 * 387 344 102 16 chr2 205035845 205036089 -45651765 - L2 LINE L2 -849 2465 2201 2160 129 52 0 chr2 205036364 205036728 -45651126 - L1MB1 LINE L1 0 6168 5786 1671 134 0 0 chr2 205036744 205037006 -45650848 + Tigger1 DNA MER2_type 30 291 -2127 2277 91 6 6 chr2 205037006 205037336 -45650518 - L1PA13 LINE L1 -1 6162 5833 3461 249 206 10 chr2 205037460 205038772 -45649082 + L2 LINE L2 632 2200 -1114 2284 150 0 5 chr2 205038841 205039208 -45648646 - MLT1A1 LTR MaLR 0 365 1 21 36 0 0 chr2 205041642 205041670 -45646184 + AT_rich Low_complexity Low_complexity 1 28 0 14026 229 29 20 chr2 205041896 205045722 -45642132 + L1PA13 LINE L1 62 4426 -2371 2223 113 3 0 chr2 205045722 205046015 -45641839 + AluSx SINE Alu 1 294 -18 14026 229 29 20 chr2 205046015 205047391 -45640463 + L1PA13 LINE L1 4426 5789 -1008 311 85 0 17 chr2 205047492 205047551 -45640303 - L1P LINE L1 -819 5344 5287 295 91 11 125 chr2 205047551 205047639 -45640215 - L1P LINE L1 -835 5331 5254 12233 111 15 3 chr2 205047646 205049545 -45638309 + Tigger1 DNA MER2_type 279 2200 -218 432 0 0 0 chr2 205049547 205049595 -45638259 + (TA)n Simple_repeat Simple_repeat 1 48 0 2127 106 0 0 chr2 205049638 205049911 -45637943 - AluSx SINE Alu -39 273 1 801 194 6 40 chr2 205049917 205050092 -45637762 - AluJo SINE Alu -24 288 120 751 158 115 12 chr2 205050092 205050257 -45637597 + Tigger1 DNA MER2_type 2233 2414 -4 5416 176 28 10 chr2 205050257 205051824 -45636030 - L1M3 LINE L1 -379 5789 4198 3211 53 0 0 chr2 205051876 205052275 -45635579 - L1PA5 LINE L1 -2 6152 5754 4110 180 20 8 chr2 205052827 205053749 -45634105 + L1MB8 LINE L1 5236 6166 -12 1680 164 31 60 chr2 205054440 205054502 -45633352 - MLT1A2 LTR MaLR -1 373 311 1168 48 0 0 chr2 205054502 205054648 -45633206 - L1PA6 LINE L1 -4 6150 6005 1680 164 31 60 chr2 205054648 205054969 -45632885 - MLT1A2 LTR MaLR -63 311 1 439 283 7 0 chr2 205055100 205055245 -45632609 + L1M4 LINE L1 3602 3747 -2399 29 28 0 0 chr2 205055764 205055800 -45632054 + AT_rich Low_complexity Low_complexity 1 36 0 3470 114 29 185 chr2 205056130 205056792 -45631062 + Tigger2 DNA MER2_type 1 765 -1953 1685 78 0 14 chr2 205056792 205057011 -45630843 + AluSp SINE Alu 83 298 -15 3470 114 29 185 chr2 205057011 205057067 -45630787 + Tigger2 DNA MER2_type 765 519 -2199 1533 159 71 17 chr2 205057067 205057362 -45630492 - AluJb SINE Alu -1 311 1 3470 114 29 185 chr2 205057362 205057653 -45630201 + Tigger2 DNA MER2_type 518 853 -1865 818 177 30 18 chr2 205057648 205057812 -45630042 + Tigger2 DNA MER2_type 2542 2707 -11 * 381 350 7 32 chr2 205059447 205059730 -45628124 + L1MEc LINE L1 36 311 -6085 534 292 73 29 chr2 205060134 205060649 -45627205 + L1MEc LINE L1 658 1139 -5066 5635 79 16 12 chr2 205060651 205061486 -45626368 - L1PA13 LINE L1 -2 6161 5324 13396 41 70 8 chr2 205061489 205061748 -45626106 + L1P LINE L1 572 813 -5333 2638 23 7 0 chr2 205061748 205062053 -45625801 + AluY SINE Alu 1 307 -4 13396 41 70 8 chr2 205062053 205063636 -45624218 + L1P LINE L1 813 2529 -3617 539 133 78 0 chr2 205063740 205063830 -45624024 + ERVL LTR ERVL 3123 3219 -2545 1572 205 53 69 chr2 205063833 205064325 -45623529 + MLT2B1 LTR ERVL 37 520 0 349 272 56 72 chr2 205064396 205064576 -45623278 - L2 LINE L2 -814 2500 2324 693 300 26 17 chr2 205064585 205064818 -45623036 + MIR SINE MIR 1 235 -27 24 32 0 0 chr2 205064824 205064855 -45622999 + AT_rich Low_complexity Low_complexity 1 31 0 4944 38 5 0 chr2 205064855 205065457 -45622397 + L1PA5 LINE L1 5550 6154 0 189 0 0 0 chr2 205065938 205065959 -45621895 + (A)n Simple_repeat Simple_repeat 1 21 0 1568 144 11 53 chr2 205066166 205066450 -45621404 - AluJo SINE Alu -14 298 27 326 252 113 36 chr2 205066575 205066789 -45621065 - L1ME LINE L1 -5069 1001 756 1625 199 30 19 chr2 205066789 205067150 -45620704 - MLT1A1 LTR MaLR 0 365 1 326 252 113 36 chr2 205067150 205067237 -45620617 - L1ME LINE L1 -5314 756 677 324 232 0 14 chr2 205067518 205067587 -45620267 + MER96 DNA MER1_type? 1 68 -107 1770 233 30 11 chr2 205068047 205068588 -45619266 - L1 LINE L1 -3471 3317 2767 3419 127 45 3 chr2 205068591 205069220 -45618634 - L1 LINE L1 -4780 2009 1355 4448 260 82 41 chr2 205069245 205070797 -45617057 + HERVL40 LTR ERVL 1378 2993 -2537 584 221 53 0 chr2 205070797 205070928 -45616926 + LTR40a LTR ERVL 382 519 0 437 258 91 84 chr2 205070929 205071204 -45616650 + HERVL40 LTR ERVL 1 277 -5253 308 268 0 0 chr2 205071264 205071335 -45616519 + HERVL40 LTR ERVL 1281 1351 -4179 286 272 43 11 chr2 205071668 205071760 -45616094 + HERVL40 LTR ERVL 1390 1484 -4046 1742 168 48 18 chr2 205071761 205071802 -45616052 + MER7A DNA MER2_type 2 40 -2998 1650 138 93 37 chr2 205071802 205072157 -45615697 + THE1C LTR MaLR 1 375 0 1742 168 48 18 chr2 205072157 205072449 -45615405 + MER7A DNA MER2_type 40 343 -3 297 181 11 53 chr2 205072488 205072582 -45615272 + HERVL40 LTR ERVL 1519 1608 -3922 * 310 172 17 0 chr2 205072579 205072637 -45615217 + HERVL40 LTR ERVL 2056 2114 -3416 302 137 0 0 chr2 205072639 205072690 -45615164 - MSTA LTR MaLR -377 51 1 260 200 0 0 chr2 205072690 205072734 -45615120 - MER7A DNA MER2_type -303 45 2 628 211 8 8 chr2 205072809 205072937 -45614917 + HERVL40 LTR ERVL 2133 2260 -3270 1639 130 0 0 chr2 205072937 205073160 -45614694 + AluSg/x SINE Alu 66 288 -22 549 52 0 0 chr2 205073512 205073589 -45614265 - L1P3 LINE L1 -3959 2502 2426 4336 97 0 8 chr2 205073589 205074205 -45613649 - L1P3 LINE L1 -5849 612 2 198 191 0 0 chr2 205074808 205074850 -45613004 + CT-rich Low_complexity Low_complexity 3 44 0 293 293 104 9 chr2 205075536 205075642 -45612212 - MIR SINE MIR -44 218 103 324 0 0 0 chr2 205075809 205075845 -45612009 + (CA)n Simple_repeat Simple_repeat 1 36 0 1000 171 11 5 chr2 205076215 205076402 -45611452 - MLT1B LTR MaLR -11 379 192 427 81 58 0 chr2 205076409 205076495 -45611359 + GA-rich Low_complexity Low_complexity 2 92 0 734 178 61 12 chr2 205076512 205076675 -45611179 - MLT1B LTR MaLR -215 175 5 279 299 26 0 chr2 205077246 205077323 -45610531 - L2 LINE L2 -1 3271 3193 255 275 150 17 chr2 205077381 205077501 -45610353 - L2 LINE L2 -8 3305 3170 421 223 201 0 chr2 205077821 205077960 -45609894 - MIR SINE MIR -4 258 92 2177 123 0 9 chr2 205078179 205078495 -45609359 - AluSq SINE Alu 0 313 1 22 0 0 0 chr2 205078949 205078971 -45608883 + AT_rich Low_complexity Low_complexity 1 22 0 347 306 101 42 chr2 205080420 205080727 -45607127 - L1ME LINE L1 -459 5662 5338 2299 102 0 0 chr2 205080837 205081130 -45606724 + AluSx SINE Alu 1 293 -19 385 294 105 49 chr2 205081317 205081623 -45606231 - L1ME LINE L1 -1214 4932 4610 1217 131 0 6 chr2 205083791 205083966 -45603888 + AluSg/x SINE Alu 120 293 -16 2153 142 0 0 chr2 205084107 205084410 -45603444 + AluSx SINE Alu 1 303 -9 219 111 62 12 chr2 205084539 205084620 -45603234 + (TA)n Simple_repeat Simple_repeat 2 86 0 815 212 29 99 chr2 205085591 205085936 -45601918 - MLT1J LTR MaLR -8 503 183 505 253 30 48 chr2 205085926 205086092 -45601762 + MER20B DNA MER1_type 153 315 -468 * 464 196 20 0 chr2 205086091 205086193 -45601661 - LTR16C LTR ERVL -93 398 295 * 302 221 0 0 chr2 205086514 205086582 -45601272 + MER20B DNA MER1_type 716 783 0 1223 195 50 36 chr2 205087519 205087883 -45599971 + MLT1A2 LTR MaLR 6 374 0 260 304 43 22 chr2 205088050 205088142 -45599712 + L2 LINE L2 3209 3302 -11 304 250 0 14 chr2 205088346 205088418 -45599436 - MIR3 SINE MIR -30 178 108 2216 118 3 0 chr2 205092397 205092694 -45595160 - AluSx SINE Alu -14 298 1 605 226 231 29 chr2 205093088 205093296 -45594558 - MIR SINE MIR 0 262 13 567 176 44 49 chr2 205093524 205093729 -45594125 - MER20B DNA MER1_type -1 782 579 1843 123 12 0 chr2 205093742 205093994 -45593860 + AluSx SINE Alu 48 302 -10 360 223 39 10 chr2 205094756 205094859 -45592995 - MER20B DNA MER1_type -677 106 1 1497 191 60 3 chr2 205094924 205095206 -45592648 + AluJo SINE Alu 1 298 -14 1080 146 11 34 chr2 205095206 205095384 -45592470 + AluJo/FRAM SINE Alu 134 307 -5 311 264 47 40 chr2 205096313 205096461 -45591393 + L1MC4a LINE L1 5768 5916 -1892 1938 62 8 19 chr2 205096537 205096795 -45591059 - AluY SINE Alu -10 301 47 263 248 147 18 chr2 205097238 205097347 -45590507 + L2 LINE L2 2259 2381 -933 2111 90 48 0 chr2 205097567 205097878 -45589976 + L1PA15 LINE L1 5832 6157 -8 2584 127 39 11 chr2 205098150 205098583 -45589271 - MER65A LTR ERV1 0 445 1 1315 165 168 28 chr2 205098939 205099379 -45588475 + L1MD2 LINE L1 5473 5961 -209 1873 224 132 21 chr2 205099979 205100538 -45587316 - MLT1E2 LTR MaLR -5 621 1 268 236 0 0 chr2 205101297 205101352 -45586502 - MER5B DNA MER1_type -122 56 2 21 0 0 0 chr2 205101476 205101497 -45586357 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 205102235 205102264 -45585590 + AT_rich Low_complexity Low_complexity 1 29 0 235 274 179 0 chr2 205102437 205102521 -45585333 - MIR SINE MIR -30 232 134 21 0 0 0 chr2 205102749 205102770 -45585084 + AT_rich Low_complexity Low_complexity 1 21 0 2470 69 3 0 chr2 205102803 205103108 -45584746 + AluY SINE Alu 1 306 -5 2036 160 0 10 chr2 205104338 205104651 -45583203 + AluSx SINE Alu 1 310 -2 1874 169 3 0 chr2 205104809 205105105 -45582749 + AluJo SINE Alu 1 297 -15 487 221 133 38 chr2 205105229 205105387 -45582467 + MIR SINE MIR 20 192 -70 2474 71 10 0 chr2 205105539 205105847 -45582007 + AluY SINE Alu 1 311 0 623 183 61 8 chr2 205106967 205107098 -45580756 - MIR SINE MIR -34 228 91 396 269 83 14 chr2 205108535 205108680 -45579174 - MIR SINE MIR -27 235 81 2179 111 3 19 chr2 205108741 205109048 -45578806 + AluSx SINE Alu 1 302 -10 38963 67 6 2 chr2 205109048 205114805 -45573049 + L1P2 LINE L1 10 5789 -365 216 0 0 0 chr2 205115016 205115040 -45572814 + (A)n Simple_repeat Simple_repeat 1 24 0 2081 122 7 0 chr2 205115281 205115575 -45572279 + AluSx SINE Alu 1 296 -16 195 243 0 0 chr2 205116147 205116184 -45571670 - MIR SINE MIR -150 112 76 22 0 0 0 chr2 205116471 205116493 -45571361 + AT_rich Low_complexity Low_complexity 1 22 0 1841 209 43 9 chr2 205116965 205117411 -45570443 + MLT1C LTR MaLR 7 467 0 388 99 16 215 chr2 205117415 205117536 -45570318 + MLT1-int LTR MaLR 1210 1306 -65 23 0 0 0 chr2 205118597 205118620 -45569234 + AT_rich Low_complexity Low_complexity 1 23 0 394 269 67 17 chr2 205119222 205119341 -45568513 + MIR3 SINE MIR 9 133 -75 1225 212 91 21 chr2 205119537 205119876 -45567978 + MLT1A2 LTR MaLR 1 363 -11 271 244 0 24 chr2 205120114 205120196 -45567658 - L1ME4a LINE L1 -85 6036 5957 629 284 13 4 chr2 205120242 205120471 -45567383 - L1ME4a LINE L1 -257 5864 5634 545 291 50 22 chr2 205120775 205120954 -45566900 + MIR3 SINE MIR 20 203 -5 1579 96 36 25 chr2 205120962 205121286 -45566568 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr2 205122041 205122063 -45565791 + AT_rich Low_complexity Low_complexity 1 22 0 2419 202 53 31 chr2 205122148 205122698 -45565156 - MER68 LTR ERV1 0 562 1 24 0 0 0 chr2 205123397 205123421 -45564433 + AT_rich Low_complexity Low_complexity 1 24 0 524 249 102 35 chr2 205123501 205123670 -45564184 - L1ME4a LINE L1 -3 6118 5962 1850 196 41 37 chr2 205123670 205123962 -45563892 + MLT1C LTR MaLR 2 298 -169 2266 100 3 3 chr2 205123962 205124261 -45563593 + AluSq SINE Alu 1 299 -14 1850 196 41 37 chr2 205124261 205124432 -45563422 + MLT1C LTR MaLR 298 467 0 524 249 102 35 chr2 205124432 205124663 -45563191 - L1ME4a LINE L1 -159 5962 5691 190 196 65 0 chr2 205124841 205124887 -45562967 + MIR SINE MIR 214 262 0 230 184 110 73 chr2 205125922 205125947 -45561907 + L1ME LINE L1 5346 5369 -795 2255 115 0 3 chr2 205125947 205126252 -45561602 + AluSx SINE Alu 3 306 -6 230 184 110 73 chr2 205126252 205126362 -45561492 + L1ME LINE L1 5369 5486 -678 1300 245 81 8 chr2 205126489 205126958 -45560896 - L1MDa LINE L1 -5036 1504 1002 287 173 0 0 chr2 205126973 205127025 -45560829 + MER68 LTR ERV1 5 56 -506 861 155 0 34 chr2 205127025 205127173 -45560681 + FLAM_C SINE Alu 1 143 0 1359 236 72 34 chr2 205127173 205127617 -45560237 + MER68 LTR ERV1 53 513 -49 884 150 0 0 chr2 205227620 205227753 -45460101 - AluSq/x SINE Alu -179 133 1 1773 157 3 13 chr2 205227754 205228059 -45459795 - AluJb SINE Alu -1 311 10 2053 74 0 32 chr2 205228075 205228235 -45459619 - AluSx SINE Alu -15 297 148 2255 62 0 23 chr2 205228235 205228542 -45459312 - AluY SINE Alu -11 300 1 2053 74 0 32 chr2 205228542 205228665 -45459189 - AluSx SINE Alu -164 148 23 1630 175 0 16 chr2 205228676 205228979 -45458875 - AluJb SINE Alu -14 298 1 1855 117 0 74 chr2 205229034 205229360 -45458494 - AluSx SINE Alu -8 304 3 1689 162 3 23 chr2 205229362 205229671 -45458183 - AluJb SINE Alu -8 304 2 318 226 0 104 chr2 205229675 205229790 -45458064 + L2 LINE L2 3210 3312 -1 1074 93 0 0 chr2 205229889 205230029 -45457825 + AluSq/x SINE Alu 1 140 -173 469 81 0 0 chr2 205230130 205230192 -45457662 - Alu SINE Alu -250 62 1 403 320 26 26 chr2 205230204 205230360 -45457494 - L1MEc LINE L1 -4613 2212 2057 1494 188 38 54 chr2 205230362 205230512 -45457342 - L1MB8 LINE L1 0 6178 6027 1943 110 16 19 chr2 205230512 205230821 -45457033 + AluSq SINE Alu 1 308 -5 2170 101 10 13 chr2 205230821 205231126 -45456728 + AluSg SINE Alu 1 305 -5 1494 188 38 54 chr2 205231126 205231417 -45456437 - L1MB8 LINE L1 -150 6028 5742 2118 107 10 7 chr2 205231417 205231727 -45456127 - AluSx SINE Alu -1 311 1 1494 188 38 54 chr2 205231727 205231761 -45456093 - L1MB8 LINE L1 -436 5742 5709 728 246 22 5 chr2 205231742 205231966 -45455888 - L1MEc LINE L1 -4842 1700 1473 * 1409 87 15 10 chr2 205231966 205232162 -45455692 - AluSg/x SINE Alu 0 312 116 1208 128 6 0 chr2 205232262 205232441 -45455413 + AluSg/x SINE Alu 123 302 -8 1967 91 3 74 chr2 205232457 205232766 -45455088 + AluSq SINE Alu 16 302 -11 687 263 28 53 chr2 205232789 205232889 -45454965 - MIR SINE MIR -20 242 141 1648 86 52 56 chr2 205232889 205233158 -45454696 - AluSq SINE Alu -45 268 1 687 263 28 53 chr2 205233158 205233304 -45454550 - MIR SINE MIR -121 141 2 273 367 67 26 chr2 205233390 205233793 -45454061 + L2 LINE L2 2457 2896 -376 756 202 0 0 chr2 205233793 205233922 -45453932 + FLAM_A SINE Alu 4 132 -1 273 367 67 26 chr2 205233922 205234120 -45453734 + L2 LINE L2 2896 3084 -188 808 273 43 23 chr2 205234325 205234581 -45453273 + MIR SINE MIR 2 262 0 437 97 16 0 chr2 205237142 205237204 -45450650 + Alu SINE Alu 236 298 -14 2089 55 48 35 chr2 205237213 205237502 -45450352 - AluY SINE Alu -18 293 1 743 276 33 59 chr2 205237544 205237955 -45449899 + L1MEd LINE L1 940 1386 -4862 362 293 40 33 chr2 205237996 205238146 -45449708 - L2 LINE L2 -5 3267 3117 2127 71 0 29 chr2 205240298 205240607 -45447247 + AluSg SINE Alu 1 300 -10 279 308 63 21 chr2 205243203 205243346 -45444508 - L2 LINE L2 -49 3223 3075 2290 76 6 10 chr2 205243442 205243756 -45444098 + AluSp SINE Alu 1 313 0 760 219 32 122 chr2 205243815 205243938 -45443916 - MIR SINE MIR -6 256 170 2253 89 0 3 chr2 205243938 205244230 -45443624 - AluSx SINE Alu -21 291 1 760 219 32 122 chr2 205244230 205244384 -45443470 - MIR SINE MIR -92 170 4 361 370 48 10 chr2 205244393 205244682 -45443172 - L2 LINE L2 -535 2779 2480 200 314 171 9 chr2 205244701 205244806 -45443048 + L2 LINE L2 3057 3178 -94 388 263 68 45 chr2 205245191 205245324 -45442530 - MER91A DNA MER1_type -2 194 59 2140 96 3 10 chr2 205245977 205246280 -45441574 - AluSq SINE Alu -12 301 1 1460 133 4 9 chr2 205246524 205246757 -45441097 + AluJb SINE Alu 1 232 -80 1948 108 3 17 chr2 205250347 205250665 -45437189 + AluSp SINE Alu 1 314 0 189 121 0 0 chr2 205252655 205252688 -45435166 + (CAGAGA)n Simple_repeat Simple_repeat 4 36 0 23 54 0 0 chr2 205253029 205253066 -45434788 + GC_rich Low_complexity Low_complexity 1 37 0 2102 103 0 4 chr2 205253839 205254120 -45433734 + AluSx SINE Alu 1 280 -32 225 0 0 0 chr2 205254124 205254149 -45433705 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2286 89 0 13 chr2 205254203 205254516 -45433338 + AluSc SINE Alu 1 309 0 499 228 329 0 chr2 205254524 205254777 -45433077 - L2 LINE L2 -277 3036 2717 234 325 0 12 chr2 205254851 205254931 -45432923 + MIR SINE MIR 17 95 -113 1849 140 39 0 chr2 205254931 205255217 -45432637 - AluSx SINE Alu -15 297 1 246 399 0 26 chr2 205257643 205257796 -45430058 + G-rich Low_complexity Low_complexity 3 151 0 * 313 345 23 18 chr2 205257724 205257895 -45429959 + (CTGGGG)n Simple_repeat Simple_repeat 1 172 0 317 310 6 29 chr2 205258011 205258182 -45429672 + (CTGGGG)n Simple_repeat Simple_repeat 1 167 0 1826 103 51 55 chr2 205259519 205259726 -45428128 - AluSx SINE Alu -1 311 104 2259 88 0 13 chr2 205259726 205260033 -45427821 - AluY SINE Alu -8 303 1 1826 103 51 55 chr2 205260033 205260137 -45427717 - AluSx SINE Alu -208 104 1 237 178 0 0 chr2 205261743 205261788 -45426066 + (CGG)n Simple_repeat Simple_repeat 3 47 0 1974 130 18 0 chr2 205263266 205263551 -45424303 + AluSx SINE Alu 1 290 -22 645 14 0 0 chr2 205263552 205263626 -45424228 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 1719 121 88 0 chr2 205263630 205263928 -45423926 + AluSx SINE Alu 2 323 0 298 325 16 16 chr2 205264492 205264615 -45423239 + MIR SINE MIR 73 195 -67 2331 70 0 29 chr2 205264638 205264952 -45422902 - AluY SINE Alu -6 305 1 1942 84 13 55 chr2 205264952 205265261 -45422593 - AluY SINE Alu -15 296 1 971 155 25 6 chr2 205265550 205265711 -45422143 + AluJb SINE Alu 120 283 -29 1316 165 53 100 chr2 205265733 205265870 -45421984 + AluJo SINE Alu 3 145 -167 1913 128 0 14 chr2 205265870 205266166 -45421688 + AluSx SINE Alu 5 296 -16 1316 165 53 100 chr2 205266166 205266199 -45421655 + AluJo SINE Alu 145 178 -134 180 0 0 0 chr2 205266199 205266219 -45421635 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1316 165 53 100 chr2 205266219 205266368 -45421486 + AluJo SINE Alu 178 308 -4 224 208 21 0 chr2 205270005 205270053 -45417801 + G-rich Low_complexity Low_complexity 1 49 0 226 286 0 19 chr2 205270482 205270587 -45417267 + G-rich Low_complexity Low_complexity 3 105 0 223 298 0 29 chr2 205271417 205271522 -45416332 + GA-rich Low_complexity Low_complexity 1 101 0 211 285 15 46 chr2 205271572 205271702 -45416152 + (CAGAGA)n Simple_repeat Simple_repeat 5 130 0 215 268 70 14 chr2 205271982 205272053 -45415801 + L2 LINE L2 3210 3284 -29 239 54 27 0 chr2 205275404 205275441 -45412413 + (GAAA)n Simple_repeat Simple_repeat 3 40 0 378 291 138 77 chr2 205275535 205276012 -45411842 - L1M2 LINE L1 -1483 5365 1741 244 263 0 38 chr2 205276221 205276301 -45411553 + G-rich Low_complexity Low_complexity 1 77 0 26 0 0 0 chr2 205280046 205280072 -45407782 + GC_rich Low_complexity Low_complexity 1 26 0 211 317 0 55 chr2 205280319 205280502 -45407352 + GA-rich Low_complexity Low_complexity 2 174 0 311 268 6 61 chr2 205282273 205282437 -45405417 + CT-rich Low_complexity Low_complexity 2 156 0 198 103 0 0 chr2 205282547 205282576 -45405278 + (AGGGGG)n Simple_repeat Simple_repeat 4 32 0 21 57 0 0 chr2 205282889 205282924 -45404930 + GC_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr2 205283453 205283481 -45404373 + GC_rich Low_complexity Low_complexity 1 28 0 217 148 56 19 chr2 205283581 205283635 -45404219 + (CCCG)n Simple_repeat Simple_repeat 3 58 0 183 285 223 23 chr2 205285616 205285746 -45402108 - MER5A DNA MER1_type -5 184 29 2056 111 0 10 chr2 205285747 205286067 -45401787 - AluSx SINE Alu 0 312 1 1939 126 0 11 chr2 205286069 205286354 -45401500 - AluSx SINE Alu -4 308 27 2054 102 0 14 chr2 205286735 205287030 -45400824 - AluSx SINE Alu -20 292 2 215 299 45 104 chr2 205287036 205287237 -45400617 - L2 LINE L2 -16 3297 3109 180 0 0 0 chr2 205287449 205287469 -45400385 + (CCG)n Simple_repeat Simple_repeat 3 22 0 180 0 0 0 chr2 205287537 205287557 -45400297 + (CCG)n Simple_repeat Simple_repeat 1 20 0 2413 45 0 13 chr2 205288307 205288616 -45399238 + AluY SINE Alu 1 305 -6 1957 110 7 29 chr2 205288745 205289053 -45398801 + AluSp SINE Alu 1 301 -12 1047 152 0 22 chr2 205289053 205289237 -45398617 + AluSp SINE Alu 134 313 0 631 278 83 80 chr2 205293138 205293358 -45394496 - L2 LINE L2 -13 3300 3082 1745 81 0 17 chr2 205293358 205293628 -45394226 - AluSx SINE Alu 0 319 54 631 278 83 80 chr2 205293628 205293644 -45394210 - L2 LINE L2 -231 3082 3068 620 113 14 92 chr2 205293644 205293785 -45394069 - FLAM_C SINE Alu 0 133 4 631 278 83 80 chr2 205293785 205294242 -45393612 - L2 LINE L2 -245 3068 2583 309 304 78 0 chr2 205294364 205294466 -45393388 + L1MC/D LINE L1 4959 5068 -1078 392 259 127 19 chr2 205294585 205294954 -45392900 + L1MC/D LINE L1 5144 5581 -798 2133 108 7 10 chr2 205294954 205295251 -45392603 - AluSq SINE Alu -17 296 1 392 259 127 19 chr2 205295251 205295329 -45392525 + L1MC/D LINE L1 5581 5649 -730 814 308 124 32 chr2 205295352 205295955 -45391899 + L2 LINE L2 2370 2916 -397 1448 107 54 117 chr2 205295955 205296071 -45391783 - AluJo SINE Alu -15 297 175 1983 132 7 4 chr2 205296071 205296351 -45391503 + AluSg SINE Alu 17 297 -13 2430 70 3 3 chr2 205296351 205296649 -45391205 + AluY SINE Alu 1 298 -13 1448 107 54 117 chr2 205296649 205296848 -45391006 - AluJo SINE Alu -135 177 1 814 308 124 32 chr2 205296848 205297114 -45390740 + L2 LINE L2 2916 3313 0 251 339 17 0 chr2 205297148 205297263 -45390591 + L1MC/D LINE L1 5683 5799 -2009 1573 218 93 66 chr2 205297282 205297754 -45390100 + MER119 DNA MER1_type 8 499 -84 1972 137 3 14 chr2 205297754 205298046 -45389808 - AluSx SINE Alu -23 289 1 1573 218 93 66 chr2 205298046 205298134 -45389720 + MER119 DNA MER1_type 499 583 0 736 145 0 30 chr2 205298232 205298363 -45389491 + FLAM_C SINE Alu 9 135 -8 1462 186 0 0 chr2 205298365 205298601 -45389253 + AluSq SINE Alu 1 236 -77 2098 133 0 17 chr2 205299132 205299433 -45388421 - AluSx SINE Alu -16 296 1 1076 96 0 0 chr2 205299433 205299569 -45388285 - AluSq/x SINE Alu -177 136 1 617 285 124 12 chr2 205299666 205299915 -45387939 - L2 LINE L2 -4 3268 2992 2064 132 16 10 chr2 205300266 205300576 -45387278 + AluSx SINE Alu 1 312 0 528 311 99 43 chr2 205301172 205301494 -45386360 - L2 LINE L2 -8 3264 2925 40 0 0 0 chr2 205301673 205301713 -45386141 + AT_rich Low_complexity Low_complexity 1 40 0 196 349 127 6 chr2 205301722 205301888 -45385966 - L2 LINE L2 -604 2710 2525 400 79 48 16 chr2 205301918 205301981 -45385873 + Alu SINE Alu 226 290 -20 226 381 58 17 chr2 205302211 205302384 -45385470 - L2 LINE L2 -905 2409 2230 571 155 162 63 chr2 205302391 205302533 -45385321 - Tigger1 DNA MER2_type 0 2418 2263 2452 86 0 10 chr2 205302536 205302840 -45385014 - AluSx SINE Alu -11 301 1 2329 83 20 3 chr2 205303007 205303307 -45384547 + AluSc SINE Alu 1 305 -4 286 245 70 77 chr2 205305157 205305300 -45382554 + MIR SINE MIR 47 188 -74 2202 109 0 29 chr2 205306692 205307004 -45380850 - AluSx SINE Alu -3 309 7 2502 52 0 20 chr2 205307952 205308257 -45379597 + AluY SINE Alu 1 299 -12 1897 145 7 10 chr2 205308265 205308555 -45379299 + AluSq SINE Alu 1 289 -24 290 355 28 38 chr2 205312011 205312222 -45375632 - MIR SINE MIR 0 262 54 1705 101 42 49 chr2 205312304 205312592 -45375262 + AluSg SINE Alu 1 286 -24 26 0 0 0 chr2 205312730 205312756 -45375098 + AT_rich Low_complexity Low_complexity 1 26 0 3232 185 45 36 chr2 205312764 205312814 -45375040 + L1MB8 LINE L1 4456 4504 -1642 2015 114 14 14 chr2 205312814 205313111 -45374743 + AluSp SINE Alu 3 299 -14 3232 185 45 36 chr2 205313111 205313946 -45373908 + L1MB8 LINE L1 4504 5349 -797 2353 105 3 0 chr2 205313948 205314254 -45373600 + AluSp SINE Alu 1 307 -6 1074 52 0 22 chr2 205314256 205314390 -45373464 + AluY SINE Alu 1 131 -180 1906 182 76 86 chr2 205314404 205314875 -45372979 + L1MB8 LINE L1 5338 5812 -366 1511 146 48 41 chr2 205314875 205315169 -45372685 + AluSx SINE Alu 1 296 -16 1765 160 24 24 chr2 205315178 205315472 -45372382 + AluJb SINE Alu 1 294 -18 1906 182 76 86 chr2 205315472 205315501 -45372353 + L1MB8 LINE L1 5820 5848 -330 625 205 0 8 chr2 205315501 205315618 -45372236 + FLAM_C SINE Alu 2 117 -16 1906 182 76 86 chr2 205315618 205315698 -45372156 + L1MB8 LINE L1 5848 5923 -255 2158 95 3 24 chr2 205315816 205316111 -45371743 + AluSx SINE Alu 1 289 -23 2245 119 0 3 chr2 205316666 205316968 -45370886 + AluSq SINE Alu 3 303 -10 1504 69 11 11 chr2 205317867 205318056 -45369798 + AluSp SINE Alu 1 189 -124 2149 107 3 16 chr2 205318492 205318800 -45369054 + AluSp SINE Alu 1 304 -9 616 147 0 18 chr2 205319127 205319236 -45368618 + AluSg/x SINE Alu 188 294 -16 383 276 0 42 chr2 205321347 205321666 -45366188 + (CCCA)n Simple_repeat Simple_repeat 1 305 0 214 303 56 22 chr2 205322930 205323019 -45364835 - L2 LINE L2 -27 3286 3195 262 295 57 16 chr2 205323048 205323170 -45364684 - L1ME4a LINE L1 -28 6093 5967 2106 138 10 3 chr2 205323384 205323689 -45364165 - AluSx SINE Alu -5 307 1 368 174 20 61 chr2 205323691 205323789 -45364065 - L1MDa LINE L1 -4595 1945 1852 337 205 0 72 chr2 205323799 205323882 -45363972 - LTR9 LTR ERV1 -86 526 450 343 274 82 15 chr2 205323910 205324045 -45363809 - L1MDa LINE L1 -4711 1829 1686 225 182 36 18 chr2 205324045 205324100 -45363754 - MLT2B2 LTR ERVL 0 515 460 2168 189 23 67 chr2 205324197 205324674 -45363180 - MLT2B2 LTR ERVL -58 457 2 237 297 40 59 chr2 205324676 205324777 -45363077 - L1MDa LINE L1 -4853 1687 1586 2382 84 0 3 chr2 205324777 205325076 -45362778 - AluY SINE Alu -13 298 1 237 297 40 59 chr2 205325076 205325196 -45362658 - L1MDa LINE L1 -4954 1586 1470 1990 124 10 51 chr2 205325201 205325515 -45362339 - AluSx SINE Alu -9 303 3 21 67 0 0 chr2 205325534 205325564 -45362290 + AT_rich Low_complexity Low_complexity 1 30 0 2444 65 0 13 chr2 205325590 205325896 -45361958 - AluY SINE Alu -9 302 1 980 227 152 4 chr2 205325899 205326163 -45361691 + MER82 DNA MER2_type 351 653 0 1946 151 14 0 chr2 205326230 205326515 -45361339 - AluJb SINE Alu -23 289 1 2019 131 23 13 chr2 205326522 205326827 -45361027 - AluSc SINE Alu -1 308 1 2011 121 10 41 chr2 205326957 205327271 -45360583 - AluSx SINE Alu -7 305 2 524 245 87 48 chr2 205327342 205327429 -45360425 - L1M4 LINE L1 -3704 2442 2360 2324 113 0 0 chr2 205327429 205327731 -45360123 - AluSx SINE Alu -10 302 1 524 245 87 48 chr2 205327731 205327953 -45359901 - L1M4 LINE L1 -3786 2360 2121 32 43 0 0 chr2 205328111 205328157 -45359697 + AT_rich Low_complexity Low_complexity 1 46 0 832 226 6 0 chr2 205328193 205328357 -45359497 + AluJb SINE Alu 121 285 -27 1433 78 6 6 chr2 205328582 205328762 -45359092 - AluSp SINE Alu -17 296 117 288 135 0 0 chr2 205328862 205328914 -45358940 + AluSp/q SINE Alu 250 301 -2 240 164 104 0 chr2 205328921 205328988 -45358866 + L2 LINE L2 2334 2407 -907 1961 144 0 13 chr2 205328995 205329293 -45358561 - AluSx SINE Alu -18 294 1 1211 193 21 13 chr2 205329294 205329532 -45358322 - MER66B LTR ERV1 -220 266 27 661 228 23 74 chr2 205329538 205329679 -45358175 + L2 LINE L2 2573 2701 -613 2294 115 0 6 chr2 205329679 205329993 -45357861 + AluSx SINE Alu 1 312 0 661 228 23 74 chr2 205329993 205330066 -45357788 + L2 LINE L2 2701 2776 -538 2279 117 0 13 chr2 205330460 205330776 -45357078 + AluSx SINE Alu 1 312 0 293 229 10 52 chr2 205330948 205331044 -45356810 + L2 LINE L2 2809 2900 -414 564 94 0 24 chr2 205331044 205331129 -45356725 - AluS SINE Alu -229 84 2 606 273 34 59 chr2 205331195 205331433 -45356421 + MIR SINE MIR 17 248 -14 423 265 116 7 chr2 205331452 205331599 -45356255 - MIR SINE MIR -3 259 97 2262 105 7 3 chr2 205331599 205331895 -45355959 + AluSq SINE Alu 1 297 -16 672 125 0 0 chr2 205332015 205332111 -45355743 - AluS SINE Alu -216 97 2 993 152 9 24 chr2 205332113 205332324 -45355530 + L1M4b LINE L1 1346 1553 -5306 737 164 15 15 chr2 205332330 205332447 -45355407 + AluJo SINE Alu 3 122 -190 216 0 0 0 chr2 205332447 205332471 -45355383 + (TAA)n Simple_repeat Simple_repeat 2 25 0 737 164 15 15 chr2 205332471 205332487 -45355367 + AluJo SINE Alu 121 136 -176 2152 104 11 4 chr2 205332492 205332806 -45355048 + AluSx SINE Alu 1 316 0 10091 82 13 30 chr2 205332811 205333470 -45354384 + MER61-int LTR ERV1 2083 2752 -2465 2726 55 0 36 chr2 205333470 205333738 -45354116 + L1PA8 LINE L1 5801 6077 -95 2101 114 3 10 chr2 205333738 205334020 -45353834 + AluSp SINE Alu 1 283 -30 180 0 0 0 chr2 205334020 205334040 -45353814 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 360 0 0 0 chr2 205334039 205334079 -45353775 + (CA)n Simple_repeat Simple_repeat 1 40 0 2101 114 3 10 chr2 205334040 205334094 -45353760 + AluSp SINE Alu 283 296 -17 2726 55 0 36 chr2 205334094 205334210 -45353644 + L1PA8 LINE L1 6077 6171 -1 10091 82 13 30 chr2 205334210 205334488 -45353366 + MER61-int LTR ERV1 2752 3033 -2184 2419 57 0 14 chr2 205334488 205334785 -45353069 + AluY SINE Alu 1 293 -18 10091 82 13 30 chr2 205334785 205335420 -45352434 + MER61-int LTR ERV1 3033 3631 -1586 1980 135 0 7 chr2 205335420 205335701 -45352153 + AluSx SINE Alu 1 279 -33 320 176 0 14 chr2 205335710 205335784 -45352070 + G-rich Low_complexity Low_complexity 1 73 0 2077 114 61 7 chr2 205335789 205336086 -45351768 + AluSp SINE Alu 1 313 0 6358 108 7 16 chr2 205336089 205337054 -45350800 + MER61-int LTR ERV1 3630 4586 -631 1474 77 0 77 chr2 205337058 205337278 -45350576 - AluSp SINE Alu -2 311 109 1578 110 4 18 chr2 205337427 205337655 -45350199 + AluSg/x SINE Alu 71 295 -15 976 222 21 33 chr2 205337660 205338142 -45349712 + L1M4b LINE L1 181 844 -6015 1113 131 14 99 chr2 205338142 205338196 -45349658 + Tigger2a DNA MER2_type 2 59 -2649 2185 120 0 13 chr2 205338196 205338497 -45349357 - AluSg SINE Alu -13 297 1 1113 131 14 99 chr2 205338497 205338659 -45349195 + Tigger2a DNA MER2_type 59 199 -235 2560 147 70 15 chr2 205338659 205339129 -45348725 - MER41E LTR ERV1 0 512 17 2108 102 0 68 chr2 205339158 205339481 -45348373 - AluSg1 SINE Alu -8 301 1 279 114 0 0 chr2 205339558 205339602 -45348252 + (CA)n Simple_repeat Simple_repeat 2 45 0 615 193 0 71 chr2 205339611 205339733 -45348121 - FLAM_A SINE Alu -181 130 18 4599 60 13 67 chr2 205339733 205339980 -45347874 - PABL_A LTR ERV1 0 660 401 2219 101 0 14 chr2 205339980 205340267 -45347587 - AluSx SINE Alu -24 288 6 4599 60 13 67 chr2 205340267 205340717 -45347137 - PABL_A LTR ERV1 -259 401 1 615 193 0 71 chr2 205340717 205340734 -45347120 - FLAM_A SINE Alu -293 18 1 1663 171 0 8 chr2 205340748 205341012 -45346842 - AluJo SINE Alu -45 267 6 836 153 24 6 chr2 205341014 205341184 -45346670 + Tigger2a DNA MER2_type 205 377 -67 * 1322 186 14 54 chr2 205341182 205341228 -45346626 - AluJb SINE Alu -2 310 264 2195 116 3 0 chr2 205341228 205341529 -45346325 + AluSp SINE Alu 3 304 -9 1322 186 14 54 chr2 205341529 205341778 -45346076 - AluJb SINE Alu -48 264 27 522 122 12 24 chr2 205341906 205341988 -45345866 + AluSq/x SINE Alu 59 139 -173 2192 87 0 36 chr2 205341989 205342298 -45345556 + AluSg SINE Alu 1 298 -12 399 297 97 16 chr2 205342299 205342484 -45345370 - L2 LINE L2 -172 3141 2942 657 197 16 8 chr2 205342710 205342832 -45345022 - MIR SINE MIR -64 198 76 1127 152 0 76 chr2 205343093 205343317 -45344537 + AluJo SINE Alu 87 293 -19 322 331 190 0 chr2 205343474 205343616 -45344238 + MER91A DNA MER1_type 6 174 -22 412 350 0 8 chr2 205343669 205343792 -45344062 + MIR SINE MIR 5 126 -136 2159 109 0 7 chr2 205343797 205344099 -45343755 - AluSq SINE Alu -13 300 1 2044 143 0 0 chr2 205344101 205344395 -45343459 - AluJo SINE Alu -18 294 1 2212 106 0 0 chr2 205344407 205344709 -45343145 - AluSc SINE Alu -7 302 1 1917 111 0 43 chr2 205344711 205345036 -45342818 - AluSx SINE Alu -1 311 1 432 161 0 0 chr2 205346590 205346671 -45341183 + CT-rich Low_complexity Low_complexity 3 83 0 615 152 20 0 chr2 205347561 205347660 -45340194 + AluJo/FLAM SINE Alu 25 125 -187 2077 89 9 38 chr2 205347660 205347975 -45339879 - AluSg SINE Alu -3 307 2 2459 46 0 10 chr2 205347976 205348280 -45339574 - AluY SINE Alu -9 302 2 2219 85 0 35 chr2 205348285 205348603 -45339251 - AluSx SINE Alu -5 307 1 661 84 37 9 chr2 205348706 205348813 -45339041 - AluSg/x SINE Alu -2 307 198 369 141 0 0 chr2 205350076 205350147 -45337707 + (GGA)n Simple_repeat Simple_repeat 2 72 0 210 200 20 0 chr2 205353182 205353232 -45334622 + (TA)n Simple_repeat Simple_repeat 1 51 0 2242 100 7 0 chr2 205354421 205354722 -45333132 - AluSq SINE Alu -8 305 3 867 142 0 0 chr2 205354751 205354871 -45332983 + FLAM_C SINE Alu 1 120 -23 253 155 69 112 chr2 205354892 205354959 -45332895 - Charlie8 DNA MER1_type -184 157 96 2223 106 0 0 chr2 205354959 205355260 -45332594 + AluSg SINE Alu 1 301 -9 253 155 69 112 chr2 205355260 205355308 -45332546 - Charlie8 DNA MER1_type -245 96 47 277 298 53 35 chr2 205355338 205355452 -45332402 - MIR SINE MIR -51 211 96 791 186 0 0 chr2 205355650 205355779 -45332075 - FLAM_C SINE Alu -3 130 2 262 239 29 138 chr2 205355822 205355920 -45331934 - L2 LINE L2 -1 3312 3232 2266 89 3 10 chr2 205355920 205356223 -45331631 - AluSp SINE Alu -12 301 1 262 239 29 138 chr2 205356223 205356262 -45331592 - L2 LINE L2 -81 3232 3190 2365 50 3 25 chr2 205356915 205357234 -45330620 + AluSx SINE Alu 1 312 0 2099 85 0 17 chr2 205358181 205358476 -45329378 + AluSq SINE Alu 20 309 -4 1474 186 0 68 chr2 205359082 205359210 -45328644 + AluJo SINE Alu 1 136 -176 1973 144 0 0 chr2 205359210 205359495 -45328359 - AluJb SINE Alu -27 285 1 1474 186 0 68 chr2 205359495 205359662 -45328192 + AluJo SINE Alu 136 276 -36 2099 88 3 3 chr2 205359807 205360114 -45327740 + AluSx SINE Alu 1 307 0 1956 118 0 11 chr2 205360329 205360608 -45327246 - AluSq SINE Alu -35 278 3 21 0 0 0 chr2 205361646 205361667 -45326187 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 205363750 205363778 -45324076 + GC_rich Low_complexity Low_complexity 1 28 0 202 172 0 35 chr2 205363798 205363856 -45323998 + (CCG)n Simple_repeat Simple_repeat 3 58 0 189 0 0 0 chr2 205364299 205364320 -45323534 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 27 79 0 0 chr2 205365314 205365352 -45322502 + GC_rich Low_complexity Low_complexity 1 38 0 237 33 0 0 chr2 205366452 205366482 -45321372 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 203 328 0 0 chr2 205366682 205366746 -45321108 + C-rich Low_complexity Low_complexity 5 68 0 891 143 0 0 chr2 205367822 205367955 -45319899 - AluSq/x SINE Alu -180 133 1 282 285 49 8 chr2 205371778 205371901 -45315953 + MER112 DNA MER1_type 34 161 -99 543 16 0 0 chr2 205371901 205371965 -45315889 + (TG)n Simple_repeat Simple_repeat 1 64 0 568 165 0 52 chr2 205371969 205372084 -45315770 - FLAM_C SINE Alu -34 109 1 275 268 12 0 chr2 205372084 205372166 -45315688 + MER112 DNA MER1_type 166 248 -12 353 335 6 43 chr2 205372171 205372332 -45315522 - MIR3 SINE MIR -39 169 15 29 47 0 0 chr2 205372570 205372613 -45315241 + GC_rich Low_complexity Low_complexity 1 43 0 2052 100 16 16 chr2 205373399 205373709 -45314145 + AluSq SINE Alu 2 311 -2 2185 86 3 13 chr2 205373710 205374014 -45313840 + AluSq SINE Alu 1 301 -12 2508 53 0 0 chr2 205374718 205375017 -45312837 - AluY SINE Alu -12 299 1 1863 173 0 7 chr2 205375017 205375324 -45312530 - AluJo SINE Alu -7 305 1 681 241 32 89 chr2 205426643 205426766 -45261088 - L1MEc LINE L1 -2287 4095 3967 195 100 0 0 chr2 205426766 205426796 -45261058 + (TG)n Simple_repeat Simple_repeat 2 31 0 681 241 32 89 chr2 205426796 205426988 -45260866 - L1MEc LINE L1 -2415 3967 3798 * 1257 250 140 49 chr2 205426960 205427698 -45260156 - L1MEc LINE L1 -3970 2593 1923 1660 146 16 74 chr2 205427698 205428007 -45259847 - AluJb SINE Alu -21 291 1 1257 250 140 49 chr2 205428007 205428907 -45258947 - L1MEc LINE L1 -4640 1923 806 346 352 127 9 chr2 205429980 205430193 -45257661 - MIR SINE MIR -5 257 20 328 253 212 47 chr2 205430339 205430509 -45257345 + MIR3 SINE MIR 2 199 -9 2386 45 0 29 chr2 205433788 205434097 -45253757 - AluY SINE Alu -11 300 1 627 222 71 52 chr2 205434826 205435038 -45252816 - MIR SINE MIR 0 262 47 1080 148 19 28 chr2 205435583 205435799 -45252055 + L1PA13 LINE L1 5950 6163 0 2502 121 8 0 chr2 205435874 205436262 -45251592 + L1MA5 LINE L1 5907 6297 -3 2262 96 3 7 chr2 205438107 205438410 -45249444 - AluSg SINE Alu -8 302 1 764 187 53 35 chr2 205438514 205438685 -45249169 + MER5A DNA MER1_type 16 189 0 575 251 56 11 chr2 205438966 205439145 -45248709 + MER105 DNA DNA 18 204 0 512 219 122 20 chr2 205440358 205440554 -45247300 - L1ME4a LINE L1 0 6121 5906 349 264 83 56 chr2 205440743 205440887 -45246967 + MIR3 SINE MIR 58 205 -3 237 280 10 50 chr2 205441194 205441294 -45246560 + MER5B DNA MER1_type 3 98 -80 270 277 129 10 chr2 205441996 205442097 -45245757 - MIR SINE MIR -65 197 85 21 0 0 0 chr2 205442953 205442974 -45244880 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 205443760 205443784 -45244070 + AT_rich Low_complexity Low_complexity 1 24 0 189 227 68 0 chr2 205444234 205444278 -45243576 - L2 LINE L2 -9 3304 3258 184 302 19 0 chr2 205444426 205444479 -45243375 - L2 LINE L2 -2 3270 3217 295 269 193 0 chr2 205446852 205446971 -45240883 - MIR3 SINE MIR -9 199 58 2812 169 44 33 chr2 205447138 205447682 -45240172 + MER44D DNA MER2_type 1 605 0 24 0 0 0 chr2 205448635 205448659 -45239195 + AT_rich Low_complexity Low_complexity 1 24 0 414 222 61 10 chr2 205448807 205448906 -45238948 - L2 LINE L2 0 3313 3210 2205 116 10 0 chr2 205449472 205449782 -45238072 + AluSq SINE Alu 1 313 0 25 0 0 0 chr2 205450002 205450027 -45237827 + AT_rich Low_complexity Low_complexity 1 25 0 1703 174 4 11 chr2 205450063 205450344 -45237510 + AluJo SINE Alu 1 279 -33 514 251 6 55 chr2 205450359 205450522 -45237332 - MER5A DNA MER1_type -28 161 7 204 292 0 0 chr2 205451596 205451644 -45236210 + L2 LINE L2 3192 3239 -74 21 36 0 0 chr2 205451653 205451681 -45236173 + AT_rich Low_complexity Low_complexity 1 28 0 3365 190 160 83 chr2 205451835 205453200 -45234654 - L1MC4 LINE L1 0 8042 6574 277 167 111 46 chr2 205453303 205453411 -45234443 - L1ME4a LINE L1 -12 6109 5995 2481 57 0 60 chr2 205453519 205453850 -45234004 - AluY SINE Alu 0 311 1 299 225 80 53 chr2 205453854 205454005 -45233849 - L1ME4a LINE L1 -23 6098 5944 327 286 26 75 chr2 205455036 205455263 -45232591 - HsTC2 DNA Tc2 -1053 845 630 455 253 34 7 chr2 205455638 205455784 -45232070 + MER104 DNA Tc2 29 178 -2 212 360 13 0 chr2 205456956 205457031 -45230823 + L3 LINE CR1 1497 1572 -5 4056 158 109 120 chr2 205458114 205458637 -45229217 - Charlie1a DNA MER1_type -1306 1455 927 1026 98 8 0 chr2 205458637 205458769 -45229085 + AluSq/x SINE Alu 1 133 -180 4056 158 109 120 chr2 205458769 205459585 -45228269 - Charlie1a DNA MER1_type -1834 927 2 265 298 0 12 chr2 205460203 205460287 -45227567 - MIR SINE MIR -77 131 49 1103 259 142 39 chr2 205460333 205460787 -45227067 - MER77 LTR ERV1 -1 604 135 211 291 51 13 chr2 205461995 205462074 -45225780 - MIR SINE MIR -78 130 49 21 89 0 0 chr2 205464223 205464279 -45223575 + AT_rich Low_complexity Low_complexity 1 56 0 4077 140 12 6 chr2 205467348 205468018 -45219836 - L1PA16 LINE L1 0 6869 6196 1852 193 0 0 chr2 205468018 205468323 -45219531 - AluJb SINE Alu -6 306 2 31525 93 11 57 chr2 205468338 205474386 -45213468 - L1PA7 LINE L1 -9 6145 414 225 0 0 0 chr2 205474386 205474411 -45213443 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 31525 93 11 57 chr2 205474411 205474797 -45213057 - L1PA7 LINE L1 -5740 414 12 13222 193 34 15 chr2 205474810 205476305 -45211549 - L1PA16 LINE L1 -668 6201 4736 2278 121 3 0 chr2 205476305 205476611 -45211243 - AluSx SINE Alu -5 307 1 13222 193 34 15 chr2 205476611 205478765 -45209089 - L1PA16 LINE L1 -2133 4736 2624 2004 150 0 0 chr2 205478765 205479051 -45208803 + AluSx SINE Alu 3 288 -24 13222 193 34 15 chr2 205479051 205481775 -45206079 - L1PA16 LINE L1 -4245 2624 1 576 270 112 16 chr2 205481885 205482207 -45205647 - Tigger8 DNA MER2_type -199 467 115 288 137 96 14 chr2 205482290 205482363 -45205491 - Zaphod DNA AcHobo -333 3698 3620 393 193 37 18 chr2 205482374 205482483 -45205371 - Zaphod DNA AcHobo -639 3392 3282 * 2458 234 55 21 chr2 205482472 205483008 -45204846 - Zaphod DNA AcHobo -3354 677 114 2126 155 0 0 chr2 205483008 205483317 -45204537 - AluSx SINE Alu -3 309 1 2458 234 55 21 chr2 205483317 205483434 -45204420 - Zaphod DNA AcHobo -3917 114 2 372 299 113 5 chr2 205484345 205484539 -45203315 + MLT1L LTR MaLR 352 566 -49 1187 300 127 16 chr2 205484601 205485207 -45202647 + L2 LINE L2 2113 2785 -529 1584 147 3 97 chr2 205485258 205485396 -45202458 + AluJo SINE Alu 7 100 -212 2785 7 0 3 chr2 205485396 205485701 -45202153 + AluYa5 SINE Alu 1 304 -7 1584 147 3 97 chr2 205485701 205485882 -45201972 + AluJo SINE Alu 100 296 -16 291 263 186 25 chr2 205485912 205486030 -45201824 + L2 LINE L2 3136 3272 0 387 237 15 38 chr2 205486040 205486171 -45201683 - MER112 DNA MER1_type -6 254 127 2231 121 3 0 chr2 205487653 205487960 -45199894 + AluSq SINE Alu 1 308 -5 1767 192 3 0 chr2 205488224 205488532 -45199322 - AluJo SINE Alu 0 312 4 2203 120 0 7 chr2 205488796 205489105 -45198749 - AluSx SINE Alu 0 312 6 1811 148 19 38 chr2 205490215 205490532 -45197322 + AluSx SINE Alu 1 311 -1 477 234 195 57 chr2 205490552 205490993 -45196861 - HAL1 LINE L1 -27 2480 1979 1239 139 123 14 chr2 205491010 205491399 -45196455 - MLT1D LTR MaLR -15 490 3 336 321 46 0 chr2 205491602 205491733 -45196121 - HAL1 LINE L1 -2369 138 2 262 238 184 26 chr2 205491936 205492068 -45195786 + MIR SINE MIR 4 145 -63 2224 102 3 0 chr2 205492112 205492451 -45195403 - AluSx SINE Alu 0 340 1 199 0 0 0 chr2 205493409 205493431 -45194423 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 1933 121 4 11 chr2 205493431 205493711 -45194143 - AluSx SINE Alu -1 304 6 1984 137 3 0 chr2 205493717 205494009 -45193845 - AluSx SINE Alu -19 293 1 1120 264 111 31 chr2 205494496 205494954 -45192900 - L2 LINE L2 0 3313 2819 1133 165 30 99 chr2 205494961 205495264 -45192590 + MLT1D LTR MaLR 1 282 -223 352 269 50 37 chr2 205495887 205496088 -45191766 - MIR SINE MIR -7 255 2 214 261 0 0 chr2 205496423 205496488 -45191366 + T-rich Low_complexity Low_complexity 1 65 0 300 285 131 7 chr2 205496515 205496652 -45191202 - L2 LINE L2 0 3313 3160 430 284 136 17 chr2 205496951 205497127 -45190727 - MIR SINE MIR -42 220 24 2001 151 0 0 chr2 205497938 205498230 -45189624 - AluSx SINE Alu -20 292 1 420 20 0 0 chr2 205498613 205498662 -45189192 + (CA)n Simple_repeat Simple_repeat 2 50 0 216 264 75 28 chr2 205499981 205500087 -45187767 - MIR SINE MIR 0 262 152 186 282 0 0 chr2 205501240 205501279 -45186575 + L2 LINE L2 3148 3186 -86 195 167 0 0 chr2 205502077 205502119 -45185735 + CT-rich Low_complexity Low_complexity 2 43 0 840 231 39 51 chr2 205502222 205502534 -45185320 + L1MA9 LINE L1 5931 6238 -74 218 178 19 45 chr2 205502563 205502720 -45185134 + (TA)n Simple_repeat Simple_repeat 2 154 0 538 138 0 0 chr2 205502919 205502999 -45184855 - L1MC2 LINE L1 -14 6330 6251 2117 252 79 29 chr2 205503010 205503989 -45183865 + L1MA7 LINE L1 2647 3674 -3891 1930 227 3 3 chr2 205503989 205504354 -45183500 + L1M1 LINE L1 981 1345 -5504 12139 166 37 36 chr2 205504362 205506290 -45181564 + L1M1 LINE L1 3504 5449 -1556 1614 169 4 0 chr2 205506290 205506544 -45181310 + AluJo SINE Alu 1 255 -57 12139 166 37 36 chr2 205506544 205507456 -45180398 + L1M1 LINE L1 5449 6359 -646 4633 127 3 14 chr2 205507456 205508120 -45179734 + L1PA15 LINE L1 5505 6165 0 3271 150 42 5 chr2 205508120 205508694 -45179160 + L1 LINE L1 4320 4914 -1232 * 3864 173 27 42 chr2 205508684 205509301 -45178553 + L1MA7 LINE L1 4430 5031 -2534 2375 93 3 10 chr2 205509301 205509611 -45178243 - AluSp SINE Alu -5 308 1 3864 173 27 42 chr2 205509611 205509904 -45177950 + L1MA7 LINE L1 5031 5327 -2238 * 6831 38 6 10 chr2 205509880 205510705 -45177149 + L1PA4 LINE L1 6753 7574 0 5893 147 10 16 chr2 205510689 205511565 -45176289 + L1MA7 LINE L1 6709 7580 -130 * 2146 120 3 7 chr2 205511565 205511866 -45175988 + AluSx SINE Alu 1 300 -12 5893 147 10 16 chr2 205511866 205511997 -45175857 + L1MA7 LINE L1 7580 7710 0 3307 124 11 32 chr2 205512068 205512598 -45175256 - L1MC1 LINE L1 -7 6326 5808 1806 177 3 10 chr2 205512841 205513141 -45174713 + AluJo SINE Alu 1 298 -14 25 0 0 0 chr2 205513142 205513167 -45174687 + AT_rich Low_complexity Low_complexity 1 25 0 190 256 26 51 chr2 205513395 205513473 -45174381 + MER5B DNA MER1_type 92 167 -11 380 236 120 58 chr2 205513945 205514187 -45173667 - L1ME4a LINE L1 -175 5946 5690 3591 126 51 7 chr2 205514235 205514954 -45172900 - L1PA16 LINE L1 -11 6155 5354 468 257 165 18 chr2 205514994 205515212 -45172642 + L1ME1 LINE L1 5916 6165 -1 2259 107 3 22 chr2 205515388 205515705 -45172149 + AluSx SINE Alu 1 311 -1 14948 208 30 41 chr2 205515795 205518959 -45168895 - L1PB3 LINE L1 -3 6867 3670 1921 142 10 20 chr2 205518959 205519262 -45168592 - AluSx SINE Alu -8 304 5 14948 208 30 41 chr2 205519262 205520309 -45167545 - L1PB3 LINE L1 -3200 3670 2613 1442 130 14 5 chr2 205520309 205520525 -45167329 - AluSg/x SINE Alu -11 301 84 14948 208 30 41 chr2 205520525 205521826 -45166028 - L1PB3 LINE L1 -4257 2613 2263 2247 110 17 0 chr2 205521826 205522126 -45165728 - AluSx SINE Alu -7 305 1 14948 208 30 41 chr2 205522126 205524363 -45163491 - L1PB3 LINE L1 -4607 2263 3 3197 184 7 0 chr2 205524384 205524999 -45162855 - L1P LINE L1 -784 5362 4744 15602 179 41 15 chr2 205525009 205527866 -45159988 - L1PB1 LINE L1 0 6867 4085 180 0 0 0 chr2 205527866 205527886 -45159968 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 15602 179 41 15 chr2 205527886 205531420 -45156434 - L1PB1 LINE L1 -2782 4085 4 7680 194 20 15 chr2 205531429 205532394 -45155460 - L1 LINE L1 -1391 4755 3777 1451 176 90 14 chr2 205532394 205532673 -45155181 - AluJb SINE Alu -12 300 1 7680 194 20 15 chr2 205532673 205533371 -45154483 - L1 LINE L1 -2369 3777 3084 505 204 10 0 chr2 205533371 205533469 -45154385 - L1ME LINE L1 -506 5615 5517 621 218 0 0 chr2 205533641 205533751 -45154103 - MER81 DNA DNA -4 110 1 2498 85 0 0 chr2 205534179 205534486 -45153368 - AluSc SINE Alu -2 307 1 1806 217 31 20 chr2 205536895 205537691 -45150163 - L1M4 LINE L1 -497 5746 4940 1521 141 226 10 chr2 205537695 205538001 -45149853 + MSTA LTR MaLR 1 372 -56 42320 65 2 3 chr2 205538014 205544175 -45143679 - L1PA5 LINE L1 0 6154 1 485 95 0 27 chr2 205544175 205544249 -45143605 + MSTA LTR MaLR 357 428 0 782 238 73 45 chr2 205544275 205544561 -45143293 - L1M4 LINE L1 -1323 4892 4599 2292 194 15 8 chr2 205545571 205546051 -45141803 - L1M4 LINE L1 -5453 943 461 663 272 41 0 chr2 205546051 205546246 -45141608 + L2 LINE L2 2841 3043 -270 188 286 160 8 chr2 205546293 205546412 -45141442 - L2 LINE L2 -554 2760 2624 1474 276 124 53 chr2 205546427 205547426 -45140428 + L2 LINE L2 1840 2909 -405 43818 48 4 0 chr2 205547442 205553568 -45134286 - L1PA4 LINE L1 -5 6150 2 2533 128 46 0 chr2 205553649 205553716 -45134138 - L1MC2 LINE L1 -22 6322 6260 186 43 0 0 chr2 205553716 205553739 -45134115 + (CACCC)n Simple_repeat Simple_repeat 2 24 0 2533 128 46 0 chr2 205553739 205554063 -45133791 - L1MC2 LINE L1 -84 6260 5913 290 232 101 0 chr2 205555965 205556034 -45131820 - Charlie8 DNA MER1_type -11 2406 2331 511 254 147 11 chr2 205556124 205556301 -45131553 - Charlie8 DNA MER1_type -2174 243 43 22 88 0 0 chr2 205556410 205556467 -45131387 + AT_rich Low_complexity Low_complexity 1 57 0 946 212 6 0 chr2 205556707 205556877 -45130977 - AluJb SINE Alu -22 290 120 2409 56 0 14 chr2 205557194 205557510 -45130344 + AluY SINE Alu 1 312 0 494 0 0 32 chr2 205559396 205559459 -45128395 + (TCTCCC)n Simple_repeat Simple_repeat 3 63 0 5486 73 26 55 chr2 205559459 205560278 -45127576 + SVA Other Other 72 866 -520 3651 127 11 38 chr2 205560296 205561005 -45126849 + SVA Other Other 433 1122 -264 5493 74 28 54 chr2 205561252 205562079 -45125775 + SVA Other Other 62 866 -520 6546 63 23 62 chr2 205562097 205563089 -45124765 + SVA Other Other 433 1386 0 2812 245 188 66 chr2 205563394 205563689 -45124165 - HAL1 LINE L1 -1 2506 2248 1996 158 0 7 chr2 205563689 205563993 -45123861 - AluSx SINE Alu -10 302 1 2812 245 188 66 chr2 205563993 205565057 -45122797 - HAL1 LINE L1 -259 2248 1314 2024 112 0 0 chr2 205565057 205565324 -45122530 - AluSx SINE Alu -15 297 31 2812 245 188 66 chr2 205565324 205566139 -45121715 - HAL1 LINE L1 -1193 1314 67 2216 117 17 0 chr2 205566193 205566491 -45121363 + AluSx SINE Alu 1 303 -9 697 313 105 28 chr2 205566915 205567023 -45120831 - Charlie8 DNA MER1_type -1167 1250 1152 2307 110 0 3 chr2 205567023 205567322 -45120532 + AluSx SINE Alu 1 298 -14 697 313 105 28 chr2 205567322 205567795 -45120059 - Charlie8 DNA MER1_type -1265 1152 624 35 54 0 0 chr2 205567828 205567884 -45119970 + AT_rich Low_complexity Low_complexity 1 56 0 612 222 21 21 chr2 205567896 205568040 -45119814 - Charlie8 DNA MER1_type -1937 480 337 745 159 8 8 chr2 205569151 205569283 -45118571 + FLAM_C SINE Alu 2 133 -10 2171 129 0 6 chr2 205570248 205570559 -45117295 + AluSx SINE Alu 1 309 -3 1885 149 0 0 chr2 205571070 205571345 -45116509 + AluJo SINE Alu 21 295 -17 2199 111 10 7 chr2 205571666 205571972 -45115882 + AluSx SINE Alu 1 307 -5 304 130 29 0 chr2 205572762 205572831 -45115023 + (CA)n Simple_repeat Simple_repeat 2 72 0 375 185 23 12 chr2 205572884 205573057 -45114797 + (CA)n Simple_repeat Simple_repeat 2 176 0 1613 157 0 20 chr2 205574189 205574444 -45113410 + AluJo SINE Alu 1 250 -62 465 336 65 14 chr2 205574566 205574783 -45113071 + MIR SINE MIR 35 262 0 1267 182 116 93 chr2 205575667 205575785 -45112069 + MLT1C LTR MaLR 8 122 -345 1864 146 4 4 chr2 205575785 205576066 -45111788 + AluJb SINE Alu 1 281 -31 432 0 0 0 chr2 205576066 205576114 -45111740 + (CA)n Simple_repeat Simple_repeat 1 48 0 1267 182 116 93 chr2 205576114 205576444 -45111410 + MLT1C LTR MaLR 121 467 0 2371 101 0 0 chr2 205576457 205576755 -45111099 - AluSq SINE Alu -15 298 1 2103 121 7 0 chr2 205576799 205577104 -45110750 + AluSx SINE Alu 1 307 0 21 0 0 0 chr2 205577876 205577897 -45109957 + AT_rich Low_complexity Low_complexity 1 21 0 203 275 128 81 chr2 205578633 205578746 -45109108 - L2 LINE L2 -22 3250 3144 2437 86 0 10 chr2 205578746 205579059 -45108795 + AluSg SINE Alu 1 310 0 203 275 128 81 chr2 205579059 205579156 -45108698 - L2 LINE L2 -128 3144 3030 612 126 18 18 chr2 205579515 205579626 -45108228 - L1PB2 LINE L1 -141 6010 5900 1215 121 6 0 chr2 205579626 205579799 -45108055 - AluSg/x SINE Alu -7 305 132 235 125 0 25 chr2 205580119 205580159 -45107695 + L2 LINE L2 3185 3223 -90 1050 166 6 0 chr2 205580165 205580340 -45107514 - AluJb SINE Alu -2 310 135 202 136 0 23 chr2 205580609 205580653 -45107201 + (CAAAAA)n Simple_repeat Simple_repeat 2 44 0 541 272 82 31 chr2 205580653 205580947 -45106907 + L1MC4a LINE L1 5567 5875 -1933 267 260 112 24 chr2 205581379 205581548 -45106306 - L1ME4a LINE L1 -1 6120 5937 264 284 47 47 chr2 205581578 205581726 -45106128 - L1ME4a LINE L1 -237 5884 5737 314 256 147 13 chr2 205582353 205582509 -45105345 - L1ME4a LINE L1 -15 6106 5930 281 270 31 6 chr2 205582559 205582718 -45105136 + (TA)n Simple_repeat Simple_repeat 2 164 0 2509 68 7 7 chr2 205583604 205583913 -45103941 - AluSp SINE Alu -4 309 1 23 33 0 0 chr2 205583913 205583943 -45103911 + AT_rich Low_complexity Low_complexity 1 30 0 183 227 0 0 chr2 205583963 205584029 -45103825 + (TG)n Simple_repeat Simple_repeat 2 67 0 309 282 51 0 chr2 205584694 205584811 -45103043 + MIR3 SINE MIR 85 207 -1 237 256 0 43 chr2 205585025 205585142 -45102712 + A-rich Low_complexity Low_complexity 1 112 0 187 275 0 0 chr2 205585286 205585326 -45102528 - L2 LINE L2 -47 3266 3227 184 222 0 44 chr2 205585416 205585461 -45102393 + L2 LINE L2 3179 3221 -92 1795 167 10 20 chr2 205585552 205585858 -45101996 + AluJb SINE Alu 5 307 -5 329 256 124 0 chr2 205585927 205586048 -45101806 - MIR SINE MIR -49 213 78 217 239 0 0 chr2 205587345 205587391 -45100463 + (CAGCT)n Simple_repeat Simple_repeat 3 48 0 2217 121 0 0 chr2 205587526 205587824 -45100030 - AluSx SINE Alu -14 298 1 2300 71 3 10 chr2 205587866 205588160 -45099694 - AluSp SINE Alu -21 292 1 226 263 63 21 chr2 205588257 205588352 -45099502 - MIR SINE MIR -55 207 109 424 330 85 0 chr2 205588562 205588738 -45099116 - MIR SINE MIR -6 256 66 1679 172 0 11 chr2 205588970 205589249 -45098605 + AluJo SINE Alu 5 280 -32 249 33 0 0 chr2 205589249 205589279 -45098575 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 232 310 171 13 chr2 205589291 205589449 -45098405 - MIR SINE MIR -71 191 9 1780 166 28 7 chr2 205589646 205589936 -45097918 + AluSx SINE Alu 1 296 -16 2408 74 7 0 chr2 205590926 205591223 -45096631 - AluSp SINE Alu -14 299 1 605 118 118 0 chr2 205591358 205591460 -45096394 - L1MB3 LINE L1 -5 6178 6065 185 222 37 37 chr2 205591611 205591665 -45096189 - MIR SINE MIR -76 132 79 270 0 0 0 chr2 205591700 205591730 -45096124 + (A)n Simple_repeat Simple_repeat 1 30 0 1885 137 27 40 chr2 205591735 205592034 -45095820 + AluJo SINE Alu 1 295 -17 459 190 112 9 chr2 205592386 205592502 -45095352 + L1MC2 LINE L1 5169 5296 -850 1951 99 0 0 chr2 205592504 205592756 -45095098 + AluSc SINE Alu 55 306 -3 5237 136 40 14 chr2 205592761 205593107 -45094747 + L1MC2 LINE L1 5254 5589 -755 2060 122 7 14 chr2 205593107 205593403 -45094451 - AluSx SINE Alu -18 294 1 2291 104 10 10 chr2 205593404 205593711 -45094143 - AluSx SINE Alu -5 307 1 5237 136 40 14 chr2 205593711 205594253 -45093601 + L1MC2 LINE L1 5588 6168 -176 1172 241 157 39 chr2 205594253 205594297 -45093557 + MER34 LTR ERV1 1 38 -504 2642 128 41 10 chr2 205594297 205594712 -45093142 + MSTA LTR MaLR 1 428 0 1172 241 157 39 chr2 205594712 205595152 -45092702 + MER34 LTR ERV1 38 542 0 756 71 31 79 chr2 205595153 205595280 -45092574 + L1MC2 LINE L1 6166 6286 -58 846 148 0 0 chr2 205595280 205595408 -45092446 - AluSg/x SINE Alu -11 299 172 653 96 58 0 chr2 205595429 205595533 -45092321 + L1MC2 LINE L1 5278 5387 -2398 296 189 0 19 chr2 205595535 205595588 -45092266 - AluJo SINE Alu -131 171 120 238 83 42 21 chr2 205595588 205595636 -45092218 + L1MC2 LINE L1 6294 6342 -2 309 317 42 36 chr2 205595669 205595835 -45092019 + L1 LINE L1 4864 5027 -1119 2029 126 7 3 chr2 205595835 205596121 -45091733 + AluSx SINE Alu 5 291 -21 309 317 42 36 chr2 205596121 205596318 -45091536 + L1 LINE L1 5027 5221 -925 1891 138 23 39 chr2 205596946 205597080 -45090774 + AluSx SINE Alu 3 138 -174 2428 65 0 0 chr2 205597080 205597370 -45090484 + AluY SINE Alu 1 290 -21 1891 138 23 39 chr2 205597370 205597540 -45090314 + AluSx SINE Alu 138 302 -10 2061 119 20 7 chr2 205597805 205598107 -45089747 - AluSg SINE Alu -2 308 3 912 210 27 75 chr2 205598590 205598860 -45088994 + L1MDa LINE L1 18 271 -6269 2534 69 13 0 chr2 205598860 205599166 -45088688 + AluSp SINE Alu 1 310 -3 912 210 27 75 chr2 205599166 205599228 -45088626 + L1MDa LINE L1 271 334 -6206 2231 118 16 0 chr2 205599483 205599788 -45088066 + AluSx SINE Alu 1 310 -2 616 185 4 159 chr2 205601019 205601251 -45086603 + MER76 LTR ERV 12 207 -481 2983 131 35 0 chr2 205601776 205602258 -45085596 - L1MB1 LINE L1 -1 6167 5669 541 208 130 19 chr2 205602258 205602412 -45085442 - L1 LINE L1 -1418 4728 4558 2085 159 25 8 chr2 205602413 205602772 -45085082 + MLT1A1 LTR MaLR 1 365 0 620 176 4 0 chr2 205602773 205602902 -45084952 - L1MB1 LINE L1 -1300 4846 4714 229 208 0 42 chr2 205602875 205602947 -45084907 + L1 LINE L1 3981 4049 -2097 * 6729 223 19 26 chr2 205602948 205604700 -45083154 - L1MB1 LINE L1 -2129 4017 2279 6005 27 1 1 chr2 205605593 205606271 -45081583 + SVA Other Other 723 1386 0 2240 135 0 3 chr2 205606281 205606593 -45081261 + AluSx SINE Alu 1 311 -1 348 127 0 0 chr2 205607530 205607585 -45080269 + (T)n Simple_repeat Simple_repeat 1 55 0 2328 113 0 0 chr2 205607635 205607944 -45079910 + AluSx SINE Alu 3 311 -1 1593 160 3 74 chr2 205608118 205608430 -45079424 + AluJb SINE Alu 1 290 -22 778 204 31 0 chr2 205608620 205608816 -45079038 + L1M4 LINE L1 2822 3023 -3123 277 304 0 0 chr2 205608855 205608924 -45078930 + L1MA10 LINE L1 6169 6237 -97 2192 128 33 3 chr2 205608935 205609270 -45078584 - MER7A DNA MER2_type 0 346 4 418 149 46 0 chr2 205609310 205609397 -45078457 + L1MA10 LINE L1 6244 6334 0 523 310 28 44 chr2 205609423 205609784 -45078070 + L1MEc LINE L1 2055 2409 -3987 357 245 98 20 chr2 205609818 205610022 -45077832 + L1MEc LINE L1 2549 2768 -3447 312 250 57 40 chr2 205610027 205610151 -45077703 + MIR SINE MIR 124 249 -13 23 33 0 0 chr2 205610206 205610236 -45077618 + AT_rich Low_complexity Low_complexity 1 30 0 2101 115 0 29 chr2 205610265 205610577 -45077277 + AluSx SINE Alu 1 303 -9 236 241 27 54 chr2 205610577 205610689 -45077165 + MER113 DNA MER1_type? 413 521 0 320 376 119 5 chr2 205611220 205611430 -45076424 + MIR SINE MIR 23 256 -6 25 0 0 0 chr2 205611759 205611784 -45076070 + AT_rich Low_complexity Low_complexity 1 25 0 922 125 59 0 chr2 205611919 205612055 -45075799 - MSTA LTR MaLR 0 428 285 690 223 60 11 chr2 205612193 205612377 -45075477 + MIR SINE MIR 57 249 -13 454 237 172 47 chr2 205612472 205612704 -45075150 + LTR41 LTR ERVL 1 261 -534 361 169 51 22 chr2 205612800 205612919 -45074935 + LTR50 LTR ERVL 659 789 0 745 257 77 92 chr2 205612951 205613525 -45074329 - L1ME LINE L1 -344 5777 5196 703 151 65 0 chr2 205613525 205613664 -45074190 - L1MB3 LINE L1 0 6183 6036 745 257 77 92 chr2 205613664 205613976 -45073878 - L1ME LINE L1 -925 5196 4901 2393 82 0 0 chr2 205613976 205614270 -45073584 + AluY SINE Alu 2 295 -16 745 257 77 92 chr2 205614270 205614319 -45073535 - L1ME LINE L1 -1220 4901 4853 2380 158 57 0 chr2 205614634 205615039 -45072815 - MSTA LTR MaLR 0 428 1 316 276 167 21 chr2 205615090 205615191 -45072663 + L1MC4a LINE L1 5738 5823 -1985 2301 49 4 0 chr2 205615191 205615455 -45072399 - AluSp SINE Alu -48 265 1 316 276 167 21 chr2 205615455 205615545 -45072309 + L1MC4a LINE L1 5823 5957 -1851 245 211 0 19 chr2 205616385 205616437 -45071417 + MIR SINE MIR 96 146 -116 1899 147 3 20 chr2 205616674 205616966 -45070888 - AluSx SINE Alu -21 291 5 2411 76 0 10 chr2 205617165 205617469 -45070385 + AluY SINE Alu 1 301 -10 23 68 0 0 chr2 205618060 205618104 -45069750 + AT_rich Low_complexity Low_complexity 1 44 0 450 187 0 0 chr2 205618133 205618208 -45069646 + MER116 DNA Mariner 6 80 0 316 202 30 135 chr2 205618214 205618355 -45069499 - L1ME LINE L1 -333 5829 5702 846 163 0 0 chr2 205618411 205618534 -45069320 + FLAM_C SINE Alu 1 123 -20 793 311 30 11 chr2 205618536 205618902 -45068952 - L1ME LINE L1 -494 5668 5296 2083 117 20 3 chr2 205619037 205619335 -45068519 - AluSx SINE Alu -9 303 1 931 293 80 39 chr2 205619521 205620061 -45067793 - L2 LINE L2 -2009 1305 744 322 202 64 11 chr2 205620116 205620210 -45067644 + L1ME4a LINE L1 6021 6119 -2 27 87 0 0 chr2 205620542 205620611 -45067243 + AT_rich Low_complexity Low_complexity 1 69 0 2537 73 0 0 chr2 205620753 205621054 -45066800 + AluY SINE Alu 1 301 -10 750 189 0 21 chr2 205621078 205621221 -45066633 + AluJb SINE Alu 156 295 -17 203 303 69 41 chr2 205621384 205621529 -45066325 + L3 LINE CR1 1280 1428 -149 1878 137 7 0 chr2 205622545 205622815 -45065039 + AluSx SINE Alu 39 310 -2 2730 78 128 2 chr2 205623322 205623720 -45064134 - LTR7 LTR ERV1 -2 448 1 3966 119 16 12 chr2 205624283 205624861 -45062993 - LTR19B LTR ERV1 0 580 1 244 242 32 0 chr2 205625142 205625204 -45062650 + MIR SINE MIR 88 151 -57 507 154 46 85 chr2 205625594 205625724 -45062130 + MLT1K LTR MaLR 447 571 -17 1974 161 0 0 chr2 205625745 205626036 -45061818 - AluSx SINE Alu -21 291 1 1846 163 14 3 chr2 205626422 205626710 -45061144 + AluJb SINE Alu 1 291 -21 1715 167 10 27 chr2 205626803 205627103 -45060751 + AluJb SINE Alu 1 295 -17 2025 100 50 14 chr2 205627459 205627740 -45060114 - AluSx SINE Alu -21 291 1 204 337 20 10 chr2 205628040 205628138 -45059716 - L2 LINE L2 -185 3087 2989 528 320 41 15 chr2 205628178 205628375 -45059479 + MIR SINE MIR 23 224 -38 1063 184 0 0 chr2 205628646 205628809 -45059045 - FRAM SINE Alu -21 155 1 252 115 62 52 chr2 205628813 205628909 -45058945 + (TTAAA)n Simple_repeat Simple_repeat 5 101 0 5079 161 6 21 chr2 205628914 205629078 -45058776 + L1MA6 LINE L1 4451 4616 -1530 772 172 0 0 chr2 205629078 205629223 -45058631 + FLAM_A SINE Alu 1 145 0 5079 161 6 21 chr2 205629223 205630012 -45057842 + L1MA6 LINE L1 4616 5391 -755 4696 144 31 52 chr2 205632726 205632774 -45055080 + L1MA6 LINE L1 5394 5441 -859 2251 115 13 0 chr2 205632774 205633079 -45054775 + AluSx SINE Alu 1 309 -3 4696 144 31 52 chr2 205633079 205633747 -45054107 + L1MA6 LINE L1 5441 6089 -211 626 244 0 0 chr2 205633747 205633866 -45053988 + FLAM_A SINE Alu 1 119 -14 4696 144 31 52 chr2 205633866 205634072 -45053782 + L1MA6 LINE L1 6089 6298 -2 26 0 0 0 chr2 205634149 205634175 -45053679 + AT_rich Low_complexity Low_complexity 1 26 0 337 225 13 106 chr2 205634175 205634326 -45053528 + L2 LINE L2 3161 3297 -16 250 287 122 35 chr2 205634602 205634717 -45053137 - L2 LINE L2 -2 3270 3146 253 264 147 0 chr2 205635101 205635230 -45052624 + L2 LINE L2 3166 3313 0 483 155 0 0 chr2 205635230 205635314 -45052540 + (TGGA)n Simple_repeat Simple_repeat 2 85 0 25 31 0 0 chr2 205635400 205635432 -45052422 + AT_rich Low_complexity Low_complexity 1 32 0 237 312 0 0 chr2 205635959 205636036 -45051818 + A-rich Low_complexity Low_complexity 1 77 0 2140 125 3 0 chr2 205636045 205636340 -45051514 + AluSx SINE Alu 1 296 -16 250 294 98 35 chr2 205636461 205636619 -45051235 - MIR SINE MIR -67 141 20 1683 120 94 23 chr2 205637079 205637251 -45050603 - AluSq SINE Alu 0 330 172 2421 75 0 3 chr2 205637251 205637546 -45050308 - AluSc SINE Alu -15 294 1 1683 120 94 23 chr2 205637546 205637684 -45050170 - AluSq SINE Alu -158 172 1 472 191 0 12 chr2 205638296 205638380 -45049474 + FLAM_A SINE Alu 35 117 -25 398 199 6 19 chr2 205638380 205638536 -45049318 + (TA)n Simple_repeat Simple_repeat 1 154 0 23 33 0 0 chr2 205638553 205638583 -45049271 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 205639002 205639026 -45048828 + AT_rich Low_complexity Low_complexity 1 24 0 2064 142 0 19 chr2 205639492 205639809 -45048045 + AluJb SINE Alu 1 311 -1 584 278 39 39 chr2 205640321 205640551 -45047303 + MIR SINE MIR 18 247 -15 2449 89 0 0 chr2 205641415 205641717 -45046137 + AluSx SINE Alu 1 302 -10 640 266 205 15 chr2 205641776 205642118 -45045736 + L1MC4a LINE L1 5650 6056 -1752 21 36 0 0 chr2 205642142 205642170 -45045684 + AT_rich Low_complexity Low_complexity 1 28 0 204 40 0 0 chr2 205642686 205642711 -45045143 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 1796 98 4 4 chr2 205642871 205643106 -45044748 + AluSx SINE Alu 1 235 -77 23 0 0 0 chr2 205643106 205643129 -45044725 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 205643199 205643220 -45044634 + AT_rich Low_complexity Low_complexity 1 21 0 190 279 0 0 chr2 205643298 205643341 -45044513 + L3 LINE CR1 1528 1570 -7 198 0 0 0 chr2 205643527 205643549 -45044305 + (TG)n Simple_repeat Simple_repeat 2 23 0 1713 125 111 11 chr2 205643693 205643972 -45043882 + AluSx SINE Alu 1 307 -5 1599 249 14 74 chr2 205644583 205645149 -45042705 + L1MC4 LINE L1 7092 7623 -419 1383 123 5 0 chr2 205645150 205645337 -45042517 + AluSx SINE Alu 2 189 -123 1562 162 47 31 chr2 205645822 205647336 -45040518 - SVA Other Other -551 869 433 207 279 191 0 chr2 205647611 205647679 -45040175 + L2 LINE L2 3190 3270 -2 1945 132 9 44 chr2 205648438 205648756 -45039098 - AluSx SINE Alu -5 307 1 288 0 0 0 chr2 205648958 205648990 -45038864 + (TG)n Simple_repeat Simple_repeat 2 33 0 2247 111 0 0 chr2 205648991 205649280 -45038574 - AluSq SINE Alu -24 289 1 1934 148 3 3 chr2 205649461 205649765 -45038089 - AluJb SINE Alu -8 304 1 836 155 23 6 chr2 205649845 205650019 -45037835 + L1MA9 LINE L1 6136 6312 0 2235 108 0 22 chr2 205650740 205650772 -45037082 - AluSg SINE Alu -1 309 278 207 0 0 0 chr2 205650772 205650795 -45037059 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2235 108 0 22 chr2 205650795 205651078 -45036776 - AluSg SINE Alu -32 278 1 59 46 0 0 chr2 205651113 205651200 -45036654 + AT_rich Low_complexity Low_complexity 1 87 0 2322 96 0 3 chr2 205651809 205652121 -45035733 - AluY SINE Alu 0 311 1 2040 151 0 0 chr2 205652183 205652475 -45035379 + AluSx SINE Alu 1 292 -20 180 158 0 0 chr2 205653001 205653039 -45034815 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1753 170 0 28 chr2 205653042 205653330 -45034524 - AluJo SINE Alu -32 280 1 765 189 0 8 chr2 205653332 205653464 -45034390 - FLAM_A SINE Alu -2 131 1 1135 241 83 45 chr2 205653788 205654215 -45033639 - MER77 LTR ERV1 -1 604 182 2098 154 5 22 chr2 205654380 205654751 -45033103 + MER47A DNA MER2_type 2 366 0 4691 212 55 83 chr2 205655248 205655506 -45032348 - MER21-int LTR ERV1 -55 4136 3872 1999 111 10 42 chr2 205655506 205655812 -45032042 + AluSx SINE Alu 2 297 -15 2378 94 0 3 chr2 205655812 205656118 -45031736 + AluSg SINE Alu 1 306 -4 4691 212 55 83 chr2 205656118 205656906 -45030948 - MER21-int LTR ERV1 -318 3873 3150 2473 66 0 7 chr2 205656906 205657209 -45030645 - AluY SINE Alu -10 301 1 4691 212 55 83 chr2 205657209 205657827 -45030027 - MER21-int LTR ERV1 -1041 3150 2516 2297 87 7 16 chr2 205657827 205658137 -45029717 + AluSq SINE Alu 1 307 -6 2294 79 0 0 chr2 205658218 205658495 -45029359 - AluSg SINE Alu -14 296 20 416 169 0 0 chr2 205658495 205658566 -45029288 - AluSc SINE Alu -65 244 174 1406 194 66 7 chr2 205658594 205658867 -45028987 + AluJo SINE Alu 1 289 -23 808 263 48 46 chr2 205658889 205659120 -45028734 - L1MC4a LINE L1 -1968 5840 5606 2449 68 3 0 chr2 205659120 205659416 -45028438 + AluSg SINE Alu 1 297 -13 808 263 48 46 chr2 205659416 205659622 -45028232 - L1MC4a LINE L1 -2202 5606 5402 772 138 0 76 chr2 205659646 205659791 -45028063 - FLAM_C SINE Alu -9 134 1 282 52 24 0 chr2 205659920 205659968 -45027886 - L1MB7 LINE L1 0 6178 6124 2251 117 7 0 chr2 205659971 205660279 -45027575 + AluSx SINE Alu 1 310 -2 1181 142 29 33 chr2 205660313 205660553 -45027301 - L1MB7 LINE L1 -243 5941 5703 925 188 83 16 chr2 205660557 205660787 -45027067 - MLT1A1 LTR MaLR -4 361 84 2113 125 0 13 chr2 205660787 205661091 -45026763 - AluSx SINE Alu -12 300 1 925 188 83 16 chr2 205661091 205661149 -45026705 - MLT1A1 LTR MaLR -281 84 31 1183 202 31 14 chr2 205661160 205661447 -45026407 - L1MB7 LINE L1 -466 5708 5417 1320 154 42 98 chr2 205661538 205661844 -45026010 - AluJo SINE Alu -14 298 10 2369 92 13 0 chr2 205661858 205662161 -45025693 - AluSg SINE Alu -3 307 1 227 253 66 11 chr2 205662162 205662253 -45025601 - HAL1 LINE L1 -1601 906 811 2290 97 0 13 chr2 205662253 205662552 -45025302 + AluSq SINE Alu 1 295 -18 21 0 0 0 chr2 205662646 205662667 -45025187 + AT_rich Low_complexity Low_complexity 1 21 0 567 317 181 8 chr2 205662689 205663049 -45024805 - HAL1 LINE L1 -1739 768 347 422 130 0 13 chr2 205663061 205663138 -45024716 - L1MC4 LINE L1 0 8042 7967 267 271 76 69 chr2 205663140 205663284 -45024570 - MER5B DNA MER1_type -32 146 2 346 420 66 32 chr2 205663317 205663757 -45024097 - L2 LINE L2 0 3272 2818 189 0 0 0 chr2 205663882 205663903 -45023951 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 2176 106 0 3 chr2 205663903 205664187 -45023667 - AluSc SINE Alu -26 283 1 434 222 176 0 chr2 205664528 205664636 -45023218 - L2 LINE L2 -4 3309 3183 1582 193 30 7 chr2 205664656 205664961 -45022893 - AluJo SINE Alu 0 312 1 1479 210 11 0 chr2 205665325 205665596 -45022258 - AluSx SINE Alu -37 275 2 1934 131 47 3 chr2 205665624 205665921 -45021933 + AluSx SINE Alu 1 310 -2 2059 202 113 35 chr2 205666062 205666612 -45021242 - MLT1E LTR MaLR 0 593 1 1830 185 6 22 chr2 205666910 205667224 -45020630 - AluJo SINE Alu -3 309 1 1450 188 80 78 chr2 205667263 205667406 -45020448 - Charlie2 DNA MER1_type -1 2861 2720 1911 104 37 37 chr2 205667406 205667704 -45020150 + AluSx SINE Alu 1 298 -14 1450 188 80 78 chr2 205667704 205667948 -45019906 - Charlie2 DNA MER1_type -142 2720 2478 2127 55 62 22 chr2 205667948 205668243 -45019611 - AluY SINE Alu 0 306 1 1450 188 80 78 chr2 205668243 205668482 -45019372 - Charlie2 DNA MER1_type -384 2478 2232 316 297 86 51 chr2 205668495 205668670 -45019184 - Charlie2 DNA MER1_type -2499 363 183 431 207 7 160 chr2 205668708 205668858 -45018996 + L2 LINE L2 3187 3313 0 298 189 0 0 chr2 205670111 205670164 -45017690 - Alu SINE Alu -249 53 1 1914 155 13 28 chr2 205670175 205670353 -45017501 - AluSx SINE Alu 0 312 140 2064 91 0 0 chr2 205670353 205670617 -45017237 - AluY SINE Alu -9 302 39 1914 155 13 28 chr2 205670617 205670755 -45017099 - AluSx SINE Alu -172 140 1 2010 145 0 23 chr2 205670935 205671073 -45016781 + AluSx SINE Alu 1 141 -171 2170 110 3 3 chr2 205671073 205671373 -45016481 + AluSg1 SINE Alu 1 300 -9 2010 145 0 23 chr2 205671373 205671544 -45016310 + AluSx SINE Alu 141 303 -9 414 277 132 89 chr2 205671548 205671851 -45016003 + L1ME LINE L1 5485 5800 -321 1926 159 0 3 chr2 205672123 205672412 -45015442 - AluJb SINE Alu -24 288 1 22 80 0 0 chr2 205672428 205672478 -45015376 + AT_rich Low_complexity Low_complexity 1 50 0 22 56 0 0 chr2 205674963 205674999 -45012855 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 205675480 205675501 -45012353 + AT_rich Low_complexity Low_complexity 1 21 0 1888 155 7 10 chr2 205676261 205676564 -45011290 - AluJb SINE Alu -10 302 1 22 0 0 0 chr2 205676687 205676709 -45011145 + AT_rich Low_complexity Low_complexity 1 22 0 1496 180 8 0 chr2 205676839 205677078 -45010776 - AluJo SINE Alu -37 275 35 1301 210 9 0 chr2 205677107 205677336 -45010518 - AluJo SINE Alu -77 235 5 2079 159 0 0 chr2 205677603 205677911 -45009943 + AluJb SINE Alu 1 308 -4 2380 83 7 3 chr2 205678885 205679186 -45008668 + AluSx SINE Alu 1 302 -10 22 35 0 0 chr2 205679553 205679582 -45008272 + AT_rich Low_complexity Low_complexity 1 29 0 386 69 17 0 chr2 205682635 205682693 -45005161 + (TG)n Simple_repeat Simple_repeat 2 60 0 201 158 0 0 chr2 205682880 205682918 -45004936 + A-rich Low_complexity Low_complexity 1 38 0 2432 90 0 3 chr2 205683168 205683478 -45004376 + AluSg SINE Alu 1 309 -1 209 227 0 0 chr2 205683496 205683540 -45004314 + (TA)n Simple_repeat Simple_repeat 1 44 0 1914 139 7 7 chr2 205684085 205684373 -45003481 - AluJb SINE Alu -24 288 1 308 224 106 87 chr2 205684498 205684659 -45003195 - MIR3 SINE MIR -2 206 43 22 0 0 0 chr2 205684921 205684943 -45002911 + AT_rich Low_complexity Low_complexity 1 22 0 2366 112 0 0 chr2 205689110 205689422 -44998432 + AluSq SINE Alu 1 312 -1 309 109 0 0 chr2 205689511 205689557 -44998297 + (CA)n Simple_repeat Simple_repeat 2 47 0 749 225 125 38 chr2 205689632 205689872 -44997982 - MIR SINE MIR 0 262 2 562 185 166 6 chr2 205690010 205690167 -44997687 + MER105 DNA DNA 21 202 -2 2011 123 55 0 chr2 205690448 205690741 -44997113 + AluSx SINE Alu 1 309 -3 2200 69 36 23 chr2 205690947 205691252 -44996602 - AluY SINE Alu -2 309 1 2467 89 0 0 chr2 205691307 205691630 -44996224 - AluSq SINE Alu 0 313 1 566 196 92 98 chr2 205691986 205692030 -44995824 + MER5B DNA MER1_type 1 44 -134 2247 100 3 7 chr2 205692030 205692329 -44995525 + AluSq SINE Alu 3 300 -13 566 196 92 98 chr2 205692329 205692457 -44995397 + MER5B DNA MER1_type 44 172 -6 722 289 211 17 chr2 205692956 205693545 -44994309 + L2 LINE L2 2153 2855 -459 661 174 7 29 chr2 205693785 205693923 -44993931 - AluJo SINE Alu -177 135 1 30 27 0 0 chr2 205694348 205694385 -44993469 + AT_rich Low_complexity Low_complexity 1 37 0 306 292 33 25 chr2 205694830 205694950 -44992904 - HAL1 LINE L1 -1828 679 559 2181 127 3 0 chr2 205695144 205695451 -44992403 - AluSp SINE Alu -5 308 1 1837 167 0 0 chr2 205696090 205696384 -44991470 + AluJb SINE Alu 1 294 -18 876 192 0 29 chr2 205696446 205696618 -44991236 - FAM SINE Alu -4 45 1 249 399 39 50 chr2 205697005 205697288 -44990566 + L2 LINE L2 2950 3229 -43 2494 62 3 0 chr2 205697659 205697967 -44989887 - AluSp SINE Alu -4 309 1 225 341 33 11 chr2 205699426 205699517 -44988337 - MIR SINE MIR -164 98 6 278 293 16 122 chr2 205700299 205700487 -44987367 + L3 LINE CR1 1160 1327 -250 1398 135 124 29 chr2 205700497 205700771 -44987083 + AluJb SINE Alu 7 306 -6 2130 122 3 0 chr2 205700869 205701164 -44986690 + AluSc SINE Alu 2 297 -12 287 211 45 154 chr2 205701262 205701418 -44986436 + MIR SINE MIR 118 256 -6 187 29 0 59 chr2 205701561 205701595 -44986259 + (TTTTTA)n Simple_repeat Simple_repeat 1 32 0 1676 190 24 3 chr2 205701665 205701960 -44985894 + AluJb SINE Alu 1 301 -11 886 166 53 6 chr2 205701991 205702160 -44985694 - AluJb SINE Alu -135 177 1 358 214 83 0 chr2 205702185 205702269 -44985585 + MIR SINE MIR 154 244 -18 1138 217 5 5 chr2 205702667 205702884 -44984970 + AluJo SINE Alu 9 225 -87 23 33 0 0 chr2 205704310 205704340 -44983514 + AT_rich Low_complexity Low_complexity 1 30 0 2347 99 25 16 chr2 205704763 205705126 -44982728 - L1PA8 LINE L1 -11 6161 5796 234 0 0 0 chr2 205705143 205705169 -44982685 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 698 213 0 0 chr2 205705171 205705293 -44982561 - FRAM SINE Alu -30 146 25 1162 183 4 64 chr2 205705313 205705548 -44982306 + AluJo SINE Alu 1 221 -91 1404 168 12 95 chr2 205705548 205705875 -44981979 + AluJb SINE Alu 1 300 -12 22 35 0 0 chr2 205705876 205705905 -44981949 + AT_rich Low_complexity Low_complexity 1 29 0 390 91 0 0 chr2 205707003 205707058 -44980796 + (TTTA)n Simple_repeat Simple_repeat 3 57 0 857 184 12 80 chr2 205707103 205707353 -44980501 - MER106A DNA MER1_type -3 233 1 2334 115 0 3 chr2 205707609 205707923 -44979931 + AluSq SINE Alu 1 313 0 1140 178 0 11 chr2 205707928 205708108 -44979746 + AluJb SINE Alu 105 282 -30 449 216 8 24 chr2 205708108 205708233 -44979621 - L1MB2 LINE L1 -19 6152 6030 1713 135 21 40 chr2 205708234 205708559 -44979295 - L1M3 LINE L1 -407 5764 5446 1994 157 0 7 chr2 205708809 205709114 -44978740 - AluJb SINE Alu -9 303 1 22 0 0 0 chr2 205709117 205709139 -44978715 + AT_rich Low_complexity Low_complexity 1 22 0 2342 63 0 7 chr2 205709382 205709702 -44978152 + AluY SINE Alu 1 318 0 3420 159 54 63 chr2 205709849 205710890 -44976964 + L1MC1 LINE L1 4904 5973 -360 228 190 17 0 chr2 205710922 205710980 -44976874 + L1ME LINE L1 5171 5229 -917 384 342 114 10 chr2 205710988 205711190 -44976664 + L1ME LINE L1 5374 5596 -566 594 172 112 80 chr2 205711210 205711460 -44976394 - Charlie1b DNA MER1_type -208 315 58 1963 132 10 0 chr2 205711604 205711892 -44975962 - AluY SINE Alu -20 291 1 22 0 0 0 chr2 205712162 205712184 -44975670 + AT_rich Low_complexity Low_complexity 1 22 0 2321 109 0 7 chr2 205712682 205712986 -44974868 - AluSx SINE Alu -10 302 1 2161 119 0 26 chr2 205713073 205713384 -44974470 + AluSx SINE Alu 2 304 -8 2098 143 0 13 chr2 205713594 205713730 -44974124 + AluJo SINE Alu 1 137 -175 2540 42 0 23 chr2 205713730 205714040 -44973814 + AluY SINE Alu 1 303 -8 2098 143 0 13 chr2 205714040 205714210 -44973644 + AluJo SINE Alu 137 303 -9 2158 122 3 0 chr2 205714741 205715035 -44972819 + AluSx SINE Alu 1 295 -17 772 181 0 15 chr2 205715655 205715788 -44972066 + FLAM_C SINE Alu 3 133 0 963 147 33 11 chr2 205715984 205716168 -44971686 + L1M2 LINE L1 5596 5783 -517 237 193 114 11 chr2 205716256 205716344 -44971510 - MER5C DNA MER1_type -64 260 164 1485 179 17 47 chr2 205716370 205716667 -44971187 - AluJb SINE Alu -22 290 3 913 219 56 14 chr2 205716811 205717026 -44970828 - MER58A DNA MER1_type 0 224 1 1659 158 19 0 chr2 205717104 205717364 -44970490 + AluJo SINE Alu 2 266 -46 2157 107 0 3 chr2 205717470 205717760 -44970094 + AluSg SINE Alu 1 289 -21 21 0 0 0 chr2 205718498 205718519 -44969335 + AT_rich Low_complexity Low_complexity 1 21 0 201 133 0 0 chr2 205719674 205719704 -44968150 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 977 193 0 17 chr2 205719733 205719909 -44967945 - FAM SINE Alu -2 173 1 2018 123 3 50 chr2 205719919 205720236 -44967618 - AluSx SINE Alu -8 304 3 851 122 7 47 chr2 205720433 205720581 -44967273 - FLAM_C SINE Alu 0 143 2 390 312 8 16 chr2 205720839 205720964 -44966890 - MIR SINE MIR -69 139 16 2263 126 0 0 chr2 205721113 205721423 -44966431 - AluSx SINE Alu -2 310 1 1637 190 65 39 chr2 205721476 205721908 -44965946 - LTR47B LTR ERVL 0 443 1 894 255 76 20 chr2 205722139 205722441 -44965413 - MER110 LTR ERV1 -7 484 166 21 71 0 0 chr2 205722723 205722765 -44965089 + AT_rich Low_complexity Low_complexity 1 42 0 2176 117 7 7 chr2 205722880 205723187 -44964667 - AluSp SINE Alu -6 307 1 1514 120 0 5 chr2 205723613 205723821 -44964033 + AluSx SINE Alu 1 207 -105 187 295 0 49 chr2 205724093 205724154 -44963700 + MIR SINE MIR 11 68 -194 23 33 0 0 chr2 205724292 205724322 -44963532 + AT_rich Low_complexity Low_complexity 1 30 0 590 266 100 21 chr2 205725269 205725510 -44962344 - MLT1L LTR MaLR 0 615 356 271 206 41 41 chr2 205725713 205725786 -44962068 - MLT1L LTR MaLR -542 73 1 315 320 144 26 chr2 205725787 205725981 -44961873 - MIR SINE MIR -26 236 20 2276 104 7 0 chr2 205726520 205726818 -44961036 + AluSq SINE Alu 1 300 -13 1808 164 3 47 chr2 205727314 205727632 -44960222 + AluJo SINE Alu 1 304 -8 719 197 0 8 chr2 205728233 205728365 -44959489 + FLAM_C SINE Alu 1 131 -12 180 0 0 0 chr2 205728696 205728716 -44959138 + (A)n Simple_repeat Simple_repeat 1 20 0 389 256 50 75 chr2 205729081 205729241 -44958613 - MLT1L LTR MaLR -239 310 155 2324 99 0 0 chr2 205729305 205729608 -44958246 + AluSg SINE Alu 1 303 -7 22 35 0 0 chr2 205730053 205730082 -44957772 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr2 205730912 205730949 -44956905 + AT_rich Low_complexity Low_complexity 1 37 0 431 167 51 0 chr2 205731327 205731405 -44956449 + AluJ/FLAM SINE Alu 3 84 -228 180 0 0 0 chr2 205731416 205731436 -44956418 + (A)n Simple_repeat Simple_repeat 1 20 0 592 313 50 67 chr2 205731849 205732131 -44955723 + L2 LINE L2 2178 2454 -860 1544 185 40 23 chr2 205732131 205732434 -44955420 - AluJb SINE Alu -4 308 1 592 313 50 67 chr2 205732434 205732509 -44955345 + L2 LINE L2 2454 2529 -785 205 324 93 28 chr2 205732559 205732667 -44955187 + L2 LINE L2 2644 2758 -556 2094 111 35 0 chr2 205732692 205732980 -44954874 + AluSx SINE Alu 1 298 -14 2545 62 0 3 chr2 205733105 205733411 -44954443 - AluY SINE Alu -6 305 1 2229 125 0 0 chr2 205733572 205733869 -44953985 - AluSx SINE Alu -15 297 1 22 56 0 0 chr2 205733869 205733905 -44953949 + AT_rich Low_complexity Low_complexity 1 36 0 1957 95 38 0 chr2 205733955 205734218 -44953636 + AluSx SINE Alu 1 273 -39 37 18 0 18 chr2 205734218 205734243 -44953611 + AT_rich Low_complexity Low_complexity 1 25 -29 2072 73 42 28 chr2 205734243 205734530 -44953324 - AluYa5 SINE Alu -20 291 1 37 18 0 18 chr2 205734530 205734559 -44953295 + AT_rich Low_complexity Low_complexity 25 54 0 1698 187 14 0 chr2 205734559 205734848 -44953006 + AluSx SINE Alu 1 293 -19 227 171 0 0 chr2 205734890 205734931 -44952923 - Alu SINE Alu -256 46 6 1873 153 18 0 chr2 205736203 205736485 -44951369 - AluJo SINE Alu -25 287 1 956 92 0 0 chr2 205736648 205736768 -44951086 - AluSg/x SINE Alu -62 248 129 2136 122 3 7 chr2 205736883 205737187 -44950667 + AluSx SINE Alu 1 303 -9 1618 169 11 4 chr2 205737587 205737865 -44949989 - AluJo SINE Alu -19 293 14 2787 187 88 26 chr2 205737918 205738393 -44949461 - MER82 DNA MER2_type -1 652 129 2182 119 0 3 chr2 205738393 205738704 -44949150 + AluSx SINE Alu 1 310 -2 2787 187 88 26 chr2 205738704 205738839 -44949015 - MER82 DNA MER2_type -524 129 4 180 0 0 0 chr2 205739547 205739567 -44948287 + (T)n Simple_repeat Simple_repeat 1 20 0 2031 151 0 0 chr2 205740006 205740310 -44947544 + AluJb SINE Alu 1 304 -8 1690 139 70 0 chr2 205740501 205740760 -44947094 + AluJo SINE Alu 1 277 -35 23 0 0 0 chr2 205740761 205740784 -44947070 + AT_rich Low_complexity Low_complexity 1 23 0 221 355 40 0 chr2 205742107 205742183 -44945671 - MIR SINE MIR -183 79 1 2139 127 3 0 chr2 205742284 205742583 -44945271 + AluSx SINE Alu 1 300 -12 379 294 88 6 chr2 205742637 205742797 -44945057 + L1M4 LINE L1 4399 4571 -1575 1158 177 169 4 chr2 205742814 205743062 -44944792 + AluJo SINE Alu 2 290 -12 2381 115 0 0 chr2 205743154 205743466 -44944388 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 205743936 205743958 -44943896 + AT_rich Low_complexity Low_complexity 1 22 0 688 250 58 45 chr2 205744106 205744398 -44943456 - L1MD2 LINE L1 -13 6346 6051 690 189 31 0 chr2 205744491 205744618 -44943236 + FLAM_C SINE Alu 1 131 -12 2245 130 0 0 chr2 205744648 205744949 -44942905 + AluSx SINE Alu 1 301 -11 2133 67 30 0 chr2 205744953 205745256 -44942598 + AluY SINE Alu 5 315 0 1994 146 0 7 chr2 205745448 205745742 -44942112 - AluSx SINE Alu -20 292 1 2056 133 7 3 chr2 205745948 205746241 -44941613 + AluSx SINE Alu 1 294 -18 2219 45 11 0 chr2 205746673 205746939 -44940915 + AluSp SINE Alu 44 312 -1 1394 185 131 0 chr2 205747186 205747446 -44940408 - AluJo SINE Alu -8 294 1 2567 59 0 3 chr2 205747477 205747781 -44940073 + AluY SINE Alu 1 303 -8 313 386 53 0 chr2 205748932 205749064 -44938790 - L2 LINE L2 0 3272 3134 829 295 98 56 chr2 205749158 205749223 -44938631 - L2 LINE L2 -867 2447 2386 1814 151 7 20 chr2 205749223 205749522 -44938332 + AluJb SINE Alu 1 295 -17 829 295 98 56 chr2 205749522 205750147 -44937707 - L2 LINE L2 -928 2386 1728 27 51 0 17 chr2 205751862 205751880 -44935974 + AT_rich Low_complexity Low_complexity 1 18 -40 1867 157 4 4 chr2 205751880 205752161 -44935693 + AluJo SINE Alu 1 281 -31 27 51 0 17 chr2 205752161 205752201 -44935653 + AT_rich Low_complexity Low_complexity 18 58 0 1976 129 34 0 chr2 205752222 205752516 -44935338 - AluSx SINE Alu -8 304 1 22 0 0 0 chr2 205752579 205752601 -44935253 + AT_rich Low_complexity Low_complexity 1 22 0 225 255 50 68 chr2 205752649 205752810 -44935044 - L1ME4a LINE L1 -101 6020 5863 21 0 0 0 chr2 205752921 205752942 -44934912 + AT_rich Low_complexity Low_complexity 1 21 0 2648 37 0 0 chr2 205753423 205753721 -44934133 + AluY SINE Alu 1 298 -13 1833 146 0 20 chr2 205753732 205754026 -44933828 + AluJb SINE Alu 4 291 -21 1834 128 14 30 chr2 205754276 205754572 -44933282 - AluJb SINE Alu -21 291 1 2280 112 3 0 chr2 205754804 205755109 -44932745 + AluSx SINE Alu 2 307 -5 2270 99 3 0 chr2 205755112 205755406 -44932448 + AluSp SINE Alu 1 295 -18 1743 146 0 74 chr2 205755407 205755730 -44932124 + AluJo SINE Alu 1 299 -13 822 130 111 19 chr2 205755730 205755892 -44931962 - MER21A LTR ERV1 -742 189 13 330 222 46 37 chr2 205755940 205756048 -44931806 + Charlie8 DNA MER1_type 126 234 -2183 2173 109 6 22 chr2 205756448 205756761 -44931093 + AluSx SINE Alu 1 308 -4 1130 165 152 22 chr2 205756961 205757272 -44930582 + L1MB5 LINE L1 5859 6180 0 2008 135 7 3 chr2 205758642 205758939 -44928915 + AluSx SINE Alu 3 300 -12 2262 110 0 0 chr2 205759367 205759657 -44928197 - AluSx SINE Alu -22 290 1 1078 182 91 153 chr2 205760564 205761147 -44926707 + L1MC4 LINE L1 7495 8041 -1 193 195 0 0 chr2 205761862 205761903 -44925951 - L2 LINE L2 -299 2973 2933 197 271 0 0 chr2 205762366 205762414 -44925440 - L2 LINE L2 -9 3263 3216 578 139 59 10 chr2 205762822 205762923 -44924931 - U6 snRNA snRNA -1 106 1 200 278 56 0 chr2 205763032 205763104 -44924750 - MIR SINE MIR -79 183 108 2113 106 61 25 chr2 205763402 205763762 -44924092 + THE1C LTR MaLR 1 373 -2 215 200 77 0 chr2 205763762 205763827 -44924027 + MIR SINE MIR 97 166 -96 382 311 149 4 chr2 205763832 205764060 -44923794 - MIR SINE MIR 0 262 2 354 258 124 59 chr2 205764299 205764485 -44923369 + MLT1I LTR MaLR 33 230 -179 1768 142 20 20 chr2 205765059 205765361 -44922493 + AluJo SINE Alu 1 302 -10 405 125 0 0 chr2 205766388 205766452 -44921402 + L1MA10 LINE L1 6258 6321 -13 1011 156 17 0 chr2 205766843 205767023 -44920831 - MER5A DNA MER1_type -6 183 1 757 165 0 0 chr2 205767067 205767182 -44920672 + FLAM_C SINE Alu 1 115 -18 43 20 0 0 chr2 205767182 205767232 -44920622 + AT_rich Low_complexity Low_complexity 1 50 0 2209 108 0 23 chr2 205767235 205767540 -44920314 + AluSx SINE Alu 1 298 -14 2499 70 3 0 chr2 205767751 205768050 -44919804 - AluSx SINE Alu -12 300 1 24 53 0 0 chr2 205768130 205768168 -44919686 + AT_rich Low_complexity Low_complexity 1 38 0 211 196 65 0 chr2 205769264 205769310 -44918544 - L2 LINE L2 -8 3264 3216 27 0 0 0 chr2 205769427 205769454 -44918400 + AT_rich Low_complexity Low_complexity 1 27 0 447 263 100 13 chr2 205770112 205770295 -44917559 + MIR SINE MIR 39 235 -27 2228 84 7 0 chr2 205770707 205770991 -44916863 + AluSc SINE Alu 20 305 -4 2047 131 3 3 chr2 205771562 205771867 -44915987 - AluJb SINE Alu -7 305 1 316 251 283 0 chr2 205772039 205772226 -44915628 + MIR SINE MIR 2 241 -21 361 250 60 0 chr2 205772691 205772791 -44915063 - MER94 DNA DNA -22 112 7 2041 75 4 29 chr2 205773145 205773426 -44914428 + AluSx SINE Alu 29 302 -10 373 332 112 10 chr2 205773500 205773804 -44914050 - L2 LINE L2 -135 3178 2844 2438 74 7 0 chr2 205773868 205774167 -44913687 - AluSx SINE Alu -10 302 2 2160 101 24 3 chr2 205774542 205774840 -44913014 - AluSq SINE Alu -9 304 1 757 149 7 47 chr2 205774979 205775127 -44912727 + AluJo SINE Alu 2 143 -169 2290 119 0 0 chr2 205775217 205775527 -44912327 + AluSx SINE Alu 1 310 -2 2386 109 0 0 chr2 205776542 205776854 -44911000 - AluSx SINE Alu 0 312 1 2332 108 0 7 chr2 205776854 205777160 -44910694 - AluSx SINE Alu -7 305 2 1929 165 0 7 chr2 205777190 205777487 -44910367 - AluJb SINE Alu -17 295 1 1957 109 36 0 chr2 205777516 205777813 -44910041 - AluSq SINE Alu 0 307 1 334 252 69 38 chr2 205777866 205777891 -44909963 - L2 LINE L2 0 3313 3290 1596 188 45 7 chr2 205777891 205778178 -44909676 + AluJo SINE Alu 1 298 -14 334 252 69 38 chr2 205778178 205778283 -44909571 - L2 LINE L2 -23 3290 3179 21 57 0 0 chr2 205778293 205778328 -44909526 + AT_rich Low_complexity Low_complexity 1 35 0 794 130 46 38 chr2 205778334 205778465 -44909389 - FLAM_C SINE Alu -1 132 1 923 135 0 0 chr2 205778689 205778822 -44909032 + FLAM_C SINE Alu 1 133 0 215 349 39 54 chr2 205778828 205779016 -44908838 - L2 LINE L2 -342 2972 2788 2222 74 44 7 chr2 205779016 205779314 -44908540 - AluY SINE Alu -1 310 2 215 349 39 54 chr2 205779314 205779383 -44908471 - L2 LINE L2 -526 2788 2719 207 0 0 0 chr2 205779688 205779711 -44908143 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2612 84 14 0 chr2 205779713 205780071 -44907783 - L1PA8 LINE L1 -22 6150 5788 757 124 0 0 chr2 205780121 205780226 -44907628 + U6 snRNA snRNA 1 105 -2 1467 147 87 8 chr2 205781281 205781533 -44906321 + AluJo SINE Alu 25 296 -16 1309 166 0 25 chr2 205781660 205781895 -44905959 - AluJo SINE Alu 0 312 84 246 265 82 68 chr2 205782080 205782097 -44905757 + MER5B DNA MER1_type 29 44 -134 1688 167 20 3 chr2 205782097 205782390 -44905464 - AluJb SINE Alu -14 298 1 246 265 82 68 chr2 205782390 205782519 -44905335 + MER5B DNA MER1_type 44 177 -1 2395 71 0 3 chr2 205782524 205782820 -44905034 + AluY SINE Alu 1 295 -16 667 247 41 111 chr2 205782872 205783249 -44904605 + L1ME3A LINE L1 5610 5953 -217 1859 172 0 25 chr2 205783249 205783569 -44904285 + AluJo SINE Alu 1 312 0 667 247 41 111 chr2 205783569 205783632 -44904222 + L1ME3A LINE L1 5953 6019 -151 210 135 0 27 chr2 205784312 205784349 -44903505 - MIR3 SINE MIR -50 158 123 761 152 7 43 chr2 205784683 205784821 -44903033 + FLAM_C SINE Alu 1 133 0 2227 127 0 16 chr2 205785120 205785436 -44902418 + AluSx SINE Alu 1 311 -1 356 225 90 27 chr2 205785459 205785570 -44902284 + MIR SINE MIR 36 153 -109 954 174 20 113 chr2 205785608 205785855 -44901999 - AluJo SINE Alu -6 306 83 1715 167 14 7 chr2 205786084 205786378 -44901476 + AluJo SINE Alu 16 311 -1 2346 93 0 0 chr2 205786378 205786668 -44901186 + AluSc SINE Alu 1 291 -18 257 246 0 16 chr2 205786682 205786743 -44901111 - MLT1J2 LTR MaLR -330 120 61 864 179 7 7 chr2 205786998 205787143 -44900711 + AluJb SINE Alu 85 229 -83 2601 56 0 0 chr2 205787717 205788019 -44899835 - AluY SINE Alu -9 302 1 782 123 139 0 chr2 205788054 205788176 -44899678 + Tigger4(Zombi) DNA MER2_type 3 141 -2590 605 136 0 11 chr2 205788179 205788267 -44899587 + AluSc SINE Alu 3 89 -220 1957 159 13 3 chr2 205788453 205788755 -44899099 + AluSx SINE Alu 1 305 -7 2188 97 21 0 chr2 205788777 205789067 -44898787 + AluSq SINE Alu 2 297 -16 348 279 0 0 chr2 205789200 205789279 -44898575 + MER21B LTR ERV1 12 90 -773 2144 225 63 37 chr2 205789331 205789931 -44897923 + MER21B LTR ERV1 98 713 -150 27 29 0 0 chr2 205789981 205790015 -44897839 + AT_rich Low_complexity Low_complexity 1 34 0 27 49 0 0 chr2 205790899 205790940 -44896914 + AT_rich Low_complexity Low_complexity 1 41 0 1026 104 0 0 chr2 205790948 205791092 -44896762 + Tigger4(Zombi) DNA MER2_type 2529 2672 -59 1935 88 39 42 chr2 205791228 205791511 -44896343 - AluSc SINE Alu -11 298 17 2352 103 0 0 chr2 205791549 205791850 -44896004 + AluY SINE Alu 1 301 -10 2280 102 0 13 chr2 205791905 205792208 -44895646 - AluSq SINE Alu -14 299 1 1280 170 34 0 chr2 205792236 205792471 -44895383 - L1PA16 LINE L1 -1 6165 5923 1404 217 71 16 chr2 205792471 205792849 -44895005 - LTR38B LTR ERV1 0 610 212 1325 172 46 67 chr2 205792852 205793137 -44894717 + AluJb SINE Alu 1 279 -33 344 243 118 35 chr2 205793162 205793267 -44894587 - LTR38 LTR ERV1 -400 156 34 2400 74 13 3 chr2 205793267 205793565 -44894289 + AluSc SINE Alu 1 301 -8 344 243 118 35 chr2 205793565 205793603 -44894251 - LTR38 LTR ERV1 -522 34 1 361 237 271 11 chr2 205793687 205793864 -44893990 + MIR SINE MIR 15 237 -25 2194 101 3 3 chr2 205794019 205794306 -44893548 + AluSp SINE Alu 1 287 -26 1792 112 29 29 chr2 205794454 205794732 -44893122 - MER50 LTR ERV1 -24 710 433 1418 134 22 13 chr2 205794730 205794962 -44892892 - MER50 LTR ERV1 -500 234 1 * 768 99 0 0 chr2 205794982 205795083 -44892771 - AluSg/x SINE Alu -16 293 193 2197 114 17 0 chr2 205795083 205795381 -44892473 - AluSg SINE Alu -6 304 2 2359 87 3 3 chr2 205795483 205795782 -44892072 - AluSg SINE Alu -11 299 1 257 0 0 0 chr2 205795854 205795882 -44891972 + LTR46 LTR ERV1 1 28 -432 2412 103 61 63 chr2 205795937 205796105 -44891749 + LTR46 LTR ERV1 33 200 -260 1757 91 133 0 chr2 205796105 205796368 -44891486 + AluSx SINE Alu 5 302 0 2412 103 61 63 chr2 205796368 205796628 -44891226 + LTR46 LTR ERV1 200 460 0 906 98 15 0 chr2 205796812 205796945 -44890909 - FLAM_C SINE Alu -3 140 6 2115 101 31 0 chr2 205798080 205798367 -44889487 - AluSx SINE Alu -16 296 1 1912 135 7 7 chr2 205798370 205798666 -44889188 - AluJo SINE Alu -16 296 1 559 133 11 11 chr2 205798695 205798785 -44889069 + HY4 scRNA scRNA 1 90 -3 1141 171 88 118 chr2 205799272 205799729 -44888125 - LTR7 LTR ERV1 -7 443 1 238 220 0 0 chr2 205801898 205801948 -44885906 + T-rich Low_complexity Low_complexity 1 50 0 1881 97 35 59 chr2 205802747 205803036 -44884818 - AluSx SINE Alu -16 296 15 267 31 0 0 chr2 205803110 205803142 -44884712 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2118 145 0 7 chr2 205803220 205803530 -44884324 - AluSx SINE Alu -4 308 1 258 161 272 0 chr2 205804246 205804327 -44883527 + L1MA8 LINE L1 6188 6290 -1 1778 121 0 12 chr2 205804611 205804860 -44882994 - AluSx SINE Alu -7 305 60 261 267 19 48 chr2 205805393 205805498 -44882356 + MIR SINE MIR 50 151 -57 372 115 0 0 chr2 205805522 205805574 -44882280 + Alu SINE Alu 1 52 -248 2107 103 11 4 chr2 205805577 205805858 -44881996 + AluY SINE Alu 5 287 -24 2041 147 3 3 chr2 205805904 205806216 -44881638 - AluSx SINE Alu 0 312 1 1942 111 3 31 chr2 205806318 205806607 -44881247 - AluY SINE Alu -30 281 1 879 136 0 0 chr2 205806631 205806749 -44881105 - FLAM_C SINE Alu -25 118 1 2459 74 0 3 chr2 205807391 205807689 -44880165 - AluY SINE Alu -14 297 1 22 0 0 0 chr2 205807694 205807716 -44880138 + AT_rich Low_complexity Low_complexity 1 22 0 1466 190 26 39 chr2 205808079 205808384 -44879470 - AluSx SINE Alu -11 301 1 280 152 30 0 chr2 205809333 205809399 -44878455 + CT-rich Low_complexity Low_complexity 1 68 0 1629 163 46 11 chr2 205809470 205809752 -44878102 + AluSx SINE Alu 1 292 -20 1802 153 4 4 chr2 205809779 205810060 -44877794 - AluSx SINE Alu -31 281 1 190 243 68 14 chr2 205810401 205810475 -44877379 + L2 LINE L2 2647 2724 -590 3032 87 64 98 chr2 205810475 205811039 -44876815 + L1PB1 LINE L1 5607 6151 0 1687 156 0 71 chr2 205811421 205811556 -44876298 + AluJb SINE Alu 5 107 -205 1859 84 0 13 chr2 205811556 205811795 -44876059 + AluSp SINE Alu 74 309 -4 1687 156 0 71 chr2 205811795 205811967 -44875887 + AluJb SINE Alu 107 290 -22 932 195 53 0 chr2 205811977 205812146 -44875708 + AluJo SINE Alu 3 180 -132 626 206 0 0 chr2 205812173 205812280 -44875574 + AluJb SINE Alu 3 109 -203 794 194 58 48 chr2 205812281 205812487 -44875367 + MER21B LTR ERV1 379 586 -277 267 289 33 11 chr2 205812622 205812712 -44875142 - L1ME LINE L1 -5976 94 3 499 157 186 0 chr2 205812798 205812900 -44874954 + 5S rRNA rRNA 1 121 0 480 223 134 0 chr2 205812919 205813031 -44874823 + FLAM_A SINE Alu 1 127 -6 348 228 77 39 chr2 205813541 205813670 -44874184 - L1ME1 LINE L1 -2 6176 6041 729 183 12 6 chr2 205813760 205813929 -44873925 + CT-rich Low_complexity Low_complexity 3 172 0 743 113 0 0 chr2 205813932 205814038 -44873816 + AluSp/q SINE Alu 196 301 -12 403 138 0 0 chr2 205814181 205814239 -44873615 + MLT1G LTR MaLR 3 60 -535 461 185 121 9 chr2 205814285 205814598 -44873256 + MLT1G LTR MaLR 152 590 0 1868 130 76 0 chr2 205814643 205814920 -44872934 + AluSx SINE Alu 1 298 -14 2117 133 7 3 chr2 205814999 205815300 -44872554 + AluSx SINE Alu 1 302 -10 1823 145 69 0 chr2 205815302 205815591 -44872263 + AluSx SINE Alu 3 311 -1 397 220 55 9 chr2 205815596 205815705 -44872149 + L1 LINE L1 3437 3550 -2596 1445 156 35 23 chr2 205816075 205816332 -44871522 - AluJo SINE Alu -44 268 9 7801 103 10 10 chr2 205817702 205818761 -44869093 + HSMAR1 DNA Mariner 229 1287 0 2795 171 16 4 chr2 205818761 205819315 -44868539 - L1 LINE L1 -2508 5057 4497 252 0 0 0 chr2 205819316 205819344 -44868510 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1693 160 0 0 chr2 205819348 205819610 -44868244 - AluSx SINE Alu -45 267 6 2526 59 0 3 chr2 205819613 205819919 -44867935 - AluY SINE Alu -6 305 1 383 157 19 4 chr2 205819950 205819964 -44867890 - L1 LINE L1 -3293 4272 4260 1976 138 0 43 chr2 205819964 205820289 -44867565 - AluSx SINE Alu -1 311 1 2149 129 14 0 chr2 205820289 205820584 -44867270 - AluSx SINE Alu -13 299 1 383 157 19 4 chr2 205820584 205820658 -44867196 - L1 LINE L1 -3304 4261 4181 2248 109 0 16 chr2 205820705 205820880 -44866974 - AluSx SINE Alu -4 308 139 2338 95 0 0 chr2 205820880 205821174 -44866680 - AluSc SINE Alu -15 294 1 2248 109 0 16 chr2 205821174 205821311 -44866543 - AluSx SINE Alu -173 139 1 2523 40 9 43 chr2 205821410 205821732 -44866122 - AluY SINE Alu 0 311 1 560 126 32 0 chr2 205821733 205821828 -44866026 - LTR5 LTR ERVK -871 98 1 6030 163 8 1 chr2 205821831 205822760 -44865094 - L1 LINE L1 -6232 1333 399 2283 79 0 0 chr2 205822760 205823038 -44864816 - AluSg SINE Alu -3 307 30 524 91 0 0 chr2 205823038 205823115 -44864739 + Alu SINE Alu 223 299 -10 1554 179 3 10 chr2 205823115 205823411 -44864443 + LTR5 LTR ERVK 86 379 -590 612 125 0 0 chr2 205823417 205823505 -44864349 - AluS SINE Alu -225 88 1 2373 133 54 41 chr2 205823505 205823897 -44863957 - L1 LINE L1 -7156 409 13 460 231 154 43 chr2 205823912 205824262 -44863592 - L1M4c LINE L1 -4038 2346 1958 1293 241 32 43 chr2 205824354 205824437 -44863417 + MLT1A1 LTR MaLR 1 83 -282 2173 121 13 3 chr2 205824437 205824743 -44863111 + AluSg SINE Alu 1 309 -1 1293 241 32 43 chr2 205824743 205825028 -44862826 + MLT1A1 LTR MaLR 83 365 0 2175 151 52 26 chr2 205825029 205825079 -44862775 + MLT1A1-int LTR MaLR 2 49 -1686 2016 135 3 3 chr2 205825079 205825390 -44862464 + AluSq SINE Alu 1 313 0 2175 151 52 26 chr2 205825390 205825724 -44862130 + MLT1A1-int LTR MaLR 49 396 -1339 405 113 0 0 chr2 205825724 205825786 -44862068 - AluJb SINE Alu -6 305 244 1023 144 0 0 chr2 205825789 205825935 -44861919 - AluJb SINE Alu -166 146 1 1936 169 14 97 chr2 205825937 205826090 -44861764 + MLT1A1-int LTR MaLR 386 550 -1185 2325 82 3 3 chr2 205826090 205826383 -44861471 - AluY SINE Alu -18 293 1 1467 199 44 4 chr2 205826385 205826657 -44861197 - AluJo SINE Alu -17 295 13 1936 169 14 97 chr2 205826657 205826943 -44860911 + MLT1A1-int LTR MaLR 551 791 -944 1367 210 54 21 chr2 205826949 205827282 -44860572 + MLT1A1 LTR MaLR 22 365 0 2576 207 32 58 chr2 205827285 205827377 -44860477 - L1M4c LINE L1 -4676 1708 1615 2535 61 3 13 chr2 205827377 205827687 -44860167 - AluY SINE Alu -4 307 1 2576 207 32 58 chr2 205827687 205828257 -44859597 - L1M4c LINE L1 -4769 1615 1070 2246 117 13 0 chr2 205828257 205828556 -44859298 - AluSq SINE Alu -10 303 1 2576 207 32 58 chr2 205828556 205828715 -44859139 - L1M4c LINE L1 -5314 1070 908 305 322 35 9 chr2 205828745 205828860 -44858994 - ERVL LTR ERVL -5295 469 352 1542 239 207 19 chr2 205829208 205829442 -44858412 - LTR50 LTR ERVL -111 684 495 2377 82 0 0 chr2 205829442 205829735 -44858119 - AluSc SINE Alu -16 293 1 1542 239 207 19 chr2 205829735 205830069 -44857785 - LTR50 LTR ERVL -300 495 9 232 167 0 0 chr2 205830138 205830186 -44857668 - HAL1 LINE L1 -133 2374 2327 369 222 52 63 chr2 205830243 205830402 -44857452 - MLT1J LTR MaLR -92 419 227 2214 116 0 0 chr2 205830402 205830696 -44857158 - AluSc SINE Alu -15 294 1 369 222 52 63 chr2 205830696 205830723 -44857131 - MLT1J LTR MaLR -284 227 201 2130 92 67 0 chr2 205830743 205831025 -44856829 - AluSx SINE Alu -11 301 1 1184 161 173 12 chr2 205831025 205831274 -44856580 - AluJo SINE Alu -12 290 2 43 0 0 19 chr2 205831274 205831301 -44856553 + AT_rich Low_complexity Low_complexity 1 27 -26 2559 48 3 0 chr2 205831301 205831593 -44856261 - AluSp SINE Alu -20 293 1 43 0 0 19 chr2 205831593 205831619 -44856235 + AT_rich Low_complexity Low_complexity 27 53 0 1565 53 19 14 chr2 205831619 205831826 -44856028 - L1PA5 LINE L1 -6 6148 5941 925 28 0 9 chr2 205831826 205831934 -44855920 - U6 snRNA snRNA 0 107 1 2386 56 7 30 chr2 205831936 205832240 -44855614 - AluY SINE Alu -14 297 1 391 293 139 54 chr2 205832242 205832501 -44855353 - HAL1 LINE L1 -1970 537 257 1489 57 0 17 chr2 205832889 205833066 -44854788 + AluSp SINE Alu 1 174 -139 966 201 6 0 chr2 205833135 205833304 -44854550 - FAM SINE Alu -5 170 1 280 238 62 12 chr2 205833329 205833409 -44854445 - MIR SINE MIR -109 153 70 557 185 161 8 chr2 205833890 205834020 -44853834 + FRAM SINE Alu 14 163 -13 1367 70 48 5 chr2 205835344 205835530 -44852324 + AluY SINE Alu 118 311 0 315 0 0 0 chr2 205835535 205835570 -44852284 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 412 186 221 55 chr2 205836532 205836585 -44851269 + MER106B DNA MER1_type 1 44 -1015 2081 121 24 0 chr2 205836585 205836875 -44850979 + AluSg SINE Alu 1 297 -13 412 186 221 55 chr2 205836875 205836971 -44850883 + MER106B DNA MER1_type 44 123 -936 2506 57 3 3 chr2 205836971 205837270 -44850584 + AluY SINE Alu 1 299 -12 412 186 221 55 chr2 205837270 205837318 -44850536 + MER106B DNA MER1_type 123 1055 -4 321 138 185 0 chr2 205837865 205837930 -44849924 + AluJ/FRAM SINE Alu 226 302 0 22 56 0 0 chr2 205838030 205838066 -44849788 + AT_rich Low_complexity Low_complexity 1 36 0 2086 114 0 4 chr2 205838143 205838424 -44849430 + AluSq SINE Alu 20 299 -14 1367 159 0 18 chr2 205839149 205839369 -44848485 + AluJb SINE Alu 82 297 -15 306 314 67 9 chr2 205839500 205839605 -44848249 - L2 LINE L2 0 3313 3203 1052 180 0 0 chr2 205839746 205839913 -44847941 + AluJb SINE Alu 133 299 -13 480 259 106 21 chr2 205839936 205840125 -44847729 + MIR SINE MIR 1 205 -57 2298 91 3 3 chr2 205840276 205840574 -44847280 - AluSq SINE Alu -14 299 2 900 205 29 47 chr2 205840626 205840685 -44847169 + L1MC4 LINE L1 7719 7778 -264 2345 128 28 8 chr2 205840685 205841043 -44846811 - MLT1A1 LTR MaLR 0 365 1 900 205 29 47 chr2 205841043 205841261 -44846593 + L1MC4 LINE L1 7778 7991 -51 2079 146 0 0 chr2 205841280 205841575 -44846279 - AluSx SINE Alu -17 295 1 1783 153 59 0 chr2 205841913 205842201 -44845653 - AluJb SINE Alu -7 305 1 399 99 37 62 chr2 205842302 205842383 -44845471 + L1MEc LINE L1 206 284 -6279 294 190 17 0 chr2 205842387 205842445 -44845409 + FAM SINE Alu 119 177 -2 366 158 11 74 chr2 205842446 205842541 -44845313 + L1MEc LINE L1 994 1082 -5481 1604 195 27 10 chr2 205842708 205843000 -44844854 + AluJo SINE Alu 1 297 -15 769 164 16 8 chr2 205843011 205843139 -44844715 + FLAM_C SINE Alu 2 130 -13 774 222 38 41 chr2 205843141 205843294 -44844560 + L1MEc LINE L1 1026 1178 -5318 2137 131 6 6 chr2 205843294 205843606 -44844248 + AluSx SINE Alu 1 312 0 774 222 38 41 chr2 205843606 205843734 -44844120 + L1MEc LINE L1 1178 1305 -5191 2144 103 6 28 chr2 205843734 205844053 -44843801 + AluSx SINE Alu 1 312 0 774 222 38 41 chr2 205844053 205844132 -44843722 + L1MEc LINE L1 1305 1500 -4996 2371 98 0 0 chr2 205844626 205844932 -44842922 - AluSx SINE Alu -6 306 1 2321 94 17 0 chr2 205845069 205845366 -44842488 + AluSx SINE Alu 1 302 -10 2103 80 0 58 chr2 205845374 205845458 -44842396 + L1PB1 LINE L1 5857 5944 -207 2176 119 7 13 chr2 205845458 205845761 -44842093 + AluSx SINE Alu 1 301 -11 2103 80 0 58 chr2 205845761 205845989 -44841865 + L1PB1 LINE L1 5944 6151 0 1884 179 0 0 chr2 205846205 205846507 -44841347 - AluJo SINE Alu -10 302 1 1997 122 17 7 chr2 205847438 205847733 -44840121 - AluSq SINE Alu -15 298 1 2354 75 0 17 chr2 205847760 205848054 -44839800 + AluSg SINE Alu 1 289 -21 2265 87 45 0 chr2 205848064 205848352 -44839502 + AluY SINE Alu 1 301 -10 755 192 17 58 chr2 205848442 205848614 -44839240 - FRAM SINE Alu -3 173 9 257 106 0 21 chr2 205848626 205848673 -44839181 + (TCCC)n Simple_repeat Simple_repeat 4 49 0 2109 109 4 0 chr2 205848676 205848950 -44838904 - AluY SINE Alu -32 279 5 29 0 0 0 chr2 205848982 205849011 -44838843 + AT_rich Low_complexity Low_complexity 1 29 0 1159 106 10 70 chr2 205849011 205849210 -44838644 - 7SLRNA srpRNA srpRNA 0 320 134 1045 168 6 0 chr2 205849213 205849380 -44838474 - AluSg/x SINE Alu -8 302 135 2837 3 0 0 chr2 205849439 205849736 -44838118 + AluYa5 SINE Alu 1 297 -14 2587 57 0 13 chr2 205849756 205850071 -44837783 + AluY SINE Alu 1 311 0 2322 86 0 16 chr2 205850141 205850444 -44837410 - AluSx SINE Alu -14 298 1 950 185 6 0 chr2 205850539 205850696 -44837158 + AluJo SINE Alu 1 158 -154 2213 114 7 0 chr2 205850774 205851072 -44836782 + AluSq SINE Alu 1 300 -13 1016 163 0 25 chr2 205851075 205851235 -44836619 + FAM SINE Alu 1 156 -19 208 203 159 29 chr2 205851244 205851313 -44836541 - L2 LINE L2 -9 3263 3186 2253 96 7 0 chr2 205851374 205851665 -44836189 + AluSx SINE Alu 1 293 -19 2110 123 0 13 chr2 205851750 205852052 -44835802 - AluSq SINE Alu -15 298 1 2241 118 14 26 chr2 205852073 205852419 -44835435 - L1PA14 LINE L1 0 6161 5820 2755 32 0 0 chr2 205852419 205852729 -44835125 - AluY SINE Alu -1 310 1 1005 84 0 0 chr2 205852942 205853073 -44834781 - AluSp/q SINE Alu -5 308 178 1480 66 10 5 chr2 205853075 205853271 -44834583 + AluSq SINE Alu 111 307 -6 30 0 0 0 chr2 205853678 205853708 -44834146 + AT_rich Low_complexity Low_complexity 1 30 0 240 35 0 0 chr2 205853876 205853905 -44833949 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2061 104 7 0 chr2 205853905 205854183 -44833671 - AluSx SINE Alu -32 280 1 1693 177 3 32 chr2 205854299 205854615 -44833239 - AluJo SINE Alu -5 307 1 21 0 0 0 chr2 205854617 205854638 -44833216 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 205854707 205854729 -44833125 + AT_rich Low_complexity Low_complexity 1 22 0 1025 188 34 10 chr2 205854764 205854971 -44832883 - AluJo SINE Alu -100 212 1 2343 88 0 0 chr2 205854972 205855267 -44832587 - AluSx SINE Alu -17 295 1 2028 126 3 28 chr2 205855389 205855706 -44832148 + AluSx SINE Alu 1 309 -3 1023 167 173 49 chr2 205855755 205855861 -44831993 - Charlie7 DNA MER1_type -1888 724 633 2316 94 3 10 chr2 205855861 205856170 -44831684 - AluSx SINE Alu -3 309 3 1023 167 173 49 chr2 205856170 205856392 -44831462 - Charlie7 DNA MER1_type -1979 633 355 1731 165 18 3 chr2 205856399 205856684 -44831170 + AluJb SINE Alu 1 289 -23 806 115 0 0 chr2 205856698 205856802 -44831052 + AluSq/x SINE Alu 5 108 -205 1681 89 17 13 chr2 205856807 205857044 -44830810 + AluSg/x SINE Alu 66 303 -9 389 297 140 47 chr2 205857087 205857294 -44830560 - Charlie7 DNA MER1_type -2255 357 112 2298 96 0 29 chr2 205857294 205857606 -44830248 - AluSc SINE Alu -6 303 1 389 297 140 47 chr2 205857606 205857698 -44830156 - Charlie7 DNA MER1_type -2500 112 30 1761 148 0 48 chr2 205857733 205858043 -44829811 - AluJb SINE Alu -12 300 6 663 262 117 4 chr2 205858048 205858296 -44829558 - L1MEc LINE L1 -3556 2984 2709 1683 175 7 0 chr2 205858377 205858662 -44829192 - AluJb SINE Alu -25 287 1 2412 85 7 0 chr2 205858691 205858997 -44828857 + AluSx SINE Alu 1 308 -4 416 137 85 4 chr2 205859014 205859120 -44828734 - L1MEc LINE L1 -3981 2599 2449 1886 163 3 3 chr2 205859185 205859491 -44828363 + AluJb SINE Alu 5 310 -2 24 32 0 0 chr2 205859496 205859527 -44828327 + AT_rich Low_complexity Low_complexity 1 31 0 1947 146 10 7 chr2 205859669 205859977 -44827877 + AluSq SINE Alu 5 313 0 1986 129 0 0 chr2 205860050 205860336 -44827518 - AluSx SINE Alu -9 303 18 1477 139 147 18 chr2 205860372 205860645 -44827209 + AluJb SINE Alu 1 308 -4 2443 64 0 14 chr2 205860834 205861129 -44826725 + AluY SINE Alu 1 291 -20 180 125 0 0 chr2 205861186 205861218 -44826636 + (A)n Simple_repeat Simple_repeat 1 32 0 251 307 78 60 chr2 205862000 205862166 -44825688 + MIR SINE MIR 34 202 -60 414 175 12 0 chr2 205862393 205862473 -44825381 + L1M4 LINE L1 3657 3737 -2409 1008 155 7 0 chr2 205862489 205862637 -44825217 - AluSg/x SINE Alu -32 280 132 201 74 0 0 chr2 205862637 205862664 -44825190 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1956 136 4 11 chr2 205862666 205862812 -44825042 - AluSx SINE Alu -32 280 135 2217 116 0 3 chr2 205862812 205863115 -44824739 - AluSg SINE Alu -8 302 1 1956 136 4 11 chr2 205863115 205863248 -44824606 - AluSx SINE Alu -177 135 3 3835 202 80 108 chr2 205863248 205863481 -44824373 + L1M4 LINE L1 3726 3964 -2182 2211 95 27 0 chr2 205863481 205863776 -44824078 + AluSp SINE Alu 5 307 -6 3835 202 80 108 chr2 205863776 205864111 -44823743 + L1M4 LINE L1 3964 4307 -1839 2940 6 0 0 chr2 205864111 205864424 -44823430 + AluYb8 SINE Alu 1 313 -5 3835 202 80 108 chr2 205864424 205864559 -44823295 + L1M4 LINE L1 4307 4444 -1702 1556 194 0 0 chr2 205864559 205864827 -44823027 + AluJb SINE Alu 1 268 -44 3835 202 80 108 chr2 205864827 205864840 -44823014 + L1M4 LINE L1 4444 4456 -1690 270 0 0 0 chr2 205864840 205864870 -44822984 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2084 112 0 21 chr2 205864871 205865008 -44822846 + AluSx SINE Alu 2 140 -172 2449 77 0 3 chr2 205865008 205865308 -44822546 + AluY SINE Alu 1 299 -12 2084 112 0 21 chr2 205865308 205865457 -44822397 + AluSx SINE Alu 140 282 -30 207 0 0 0 chr2 205865462 205865485 -44822369 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 3835 202 80 108 chr2 205865485 205865626 -44822228 + L1M4 LINE L1 4460 4603 -1543 2185 122 3 0 chr2 205865626 205865922 -44821932 - AluSx SINE Alu -15 297 1 3835 202 80 108 chr2 205865922 205866121 -44821733 + L1M4 LINE L1 4603 4806 -1340 2381 89 3 0 chr2 205866121 205866424 -44821430 + AluY SINE Alu 1 304 -7 3835 202 80 108 chr2 205866424 205866542 -44821312 + L1M4 LINE L1 4806 4926 -1220 1620 185 3 7 chr2 205866542 205866829 -44821025 - AluJo SINE Alu -18 294 9 3835 202 80 108 chr2 205866829 205867192 -44820662 + L1M4 LINE L1 4926 5234 -912 412 116 72 0 chr2 205867213 205867282 -44820572 - U6 snRNA snRNA -33 74 1 259 189 7 0 chr2 205867309 205867372 -44820482 + L1ME1 LINE L1 6112 6183 -1 1750 183 24 0 chr2 205867381 205867671 -44820183 + AluJb SINE Alu 1 297 -15 2295 102 0 0 chr2 205867681 205867986 -44819868 + AluSc SINE Alu 1 305 -4 244 258 75 0 chr2 205868424 205868517 -44819337 - L1ME4a LINE L1 -45 6076 5977 739 225 37 11 chr2 205868610 205868801 -44819053 - MIR SINE MIR -50 212 17 2413 80 0 0 chr2 205868801 205869103 -44818751 - AluY SINE Alu -9 302 1 1948 173 28 14 chr2 205869262 205869626 -44818228 - MER58D DNA MER1_type -17 369 1 28 0 0 0 chr2 205869731 205869759 -44818095 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 205869854 205869882 -44817972 + AT_rich Low_complexity Low_complexity 1 28 0 2321 85 10 7 chr2 205869999 205870305 -44817549 - AluSp SINE Alu -6 307 1 835 97 18 0 chr2 205870377 205870490 -44817364 + AluSg/x SINE Alu 174 288 -24 261 0 0 0 chr2 205870610 205870639 -44817215 + (TA)n Simple_repeat Simple_repeat 1 29 0 1240 147 18 32 chr2 205870663 205870881 -44816973 - AluJo SINE Alu -75 237 23 2359 86 0 3 chr2 205871536 205871840 -44816014 - AluY SINE Alu -8 303 1 825 174 0 0 chr2 205871905 205872060 -44815794 - FLAM_C SINE Alu 0 155 1 278 257 108 0 chr2 205872180 205872254 -44815600 + MIR SINE MIR 94 175 -87 444 187 41 81 chr2 205872289 205872368 -44815486 + L1ME3A LINE L1 5524 5598 -572 2327 100 3 0 chr2 205872368 205872669 -44815185 + AluSx SINE Alu 1 302 -10 444 187 41 81 chr2 205872669 205872712 -44815142 + L1ME3A LINE L1 5598 5641 -529 476 123 247 11 chr2 205872717 205872831 -44815023 + Charlie5 DNA MER1_type 1 127 -2485 412 154 17 103 chr2 205872829 205872871 -44814983 + Charlie5 DNA MER1_type 2235 2279 -345 * 2132 131 0 10 chr2 205872871 205873185 -44814669 + AluSx SINE Alu 1 311 -1 412 154 17 103 chr2 205873185 205873259 -44814595 + Charlie5 DNA MER1_type 2279 2341 -283 28 0 0 0 chr2 205873275 205873303 -44814551 + AT_rich Low_complexity Low_complexity 1 28 0 2203 88 0 17 chr2 205873343 205873637 -44814217 - AluSc SINE Alu -20 289 1 625 240 81 135 chr2 205873638 205874020 -44813834 + L1ME3A LINE L1 5678 6026 -144 1273 166 21 17 chr2 205874020 205874255 -44813599 - MER106A DNA MER1_type 0 236 1 625 240 81 135 chr2 205874255 205874392 -44813462 + L1ME3A LINE L1 6026 6169 -1 2482 48 3 0 chr2 205876458 205876752 -44811102 - AluSp SINE Alu -17 296 2 37 52 0 0 chr2 205876861 205876919 -44810935 + AT_rich Low_complexity Low_complexity 1 58 0 494 79 13 0 chr2 205877504 205877580 -44810274 + (TG)n Simple_repeat Simple_repeat 2 78 0 2205 92 3 10 chr2 205878818 205879121 -44808733 - AluSp SINE Alu -12 301 1 2095 144 13 0 chr2 205880750 205881055 -44806799 + AluSx SINE Alu 1 309 -3 330 297 73 42 chr2 205881231 205881396 -44806458 + L2 LINE L2 2205 2374 -940 210 276 35 0 chr2 205881568 205881626 -44806228 + MIR SINE MIR 33 92 -170 3290 194 96 1 chr2 205881644 205882324 -44805530 + L1MD2 LINE L1 5616 6359 0 286 381 0 0 chr2 205883262 205883430 -44804424 + (CCA)n Simple_repeat Simple_repeat 1 168 0 202 225 0 0 chr2 205884142 205884182 -44803672 + (TAG)n Simple_repeat Simple_repeat 1 40 0 185 65 32 0 chr2 205884237 205884268 -44803586 + (TA)n Simple_repeat Simple_repeat 1 32 0 28 0 0 0 chr2 205884272 205884300 -44803554 + AT_rich Low_complexity Low_complexity 1 28 0 1741 160 21 21 chr2 205884300 205884457 -44803397 - AluJo SINE Alu -24 288 129 2460 63 0 10 chr2 205884457 205884757 -44803097 - AluY SINE Alu -14 297 1 1741 160 21 21 chr2 205884757 205884887 -44802967 - AluJo SINE Alu -182 130 1 1818 174 3 0 chr2 205885013 205885300 -44802554 - AluJb SINE Alu -24 288 1 49 32 0 0 chr2 205885433 205885496 -44802358 + AT_rich Low_complexity Low_complexity 1 63 0 1960 118 34 14 chr2 205885676 205885972 -44801882 - AluSx SINE Alu -10 302 1 1179 259 104 48 chr2 205886394 205886876 -44800978 - MLT1J LTR MaLR -2 509 1 311 372 58 0 chr2 205886936 205887057 -44800797 - L2 LINE L2 -5 3267 3140 2227 97 7 0 chr2 205887071 205887360 -44800494 - AluSq SINE Alu -22 291 1 1384 227 50 68 chr2 205887823 205888264 -44799590 - MLT2B1 LTR ERVL 0 520 88 452 227 72 87 chr2 205888371 205888404 -44799450 - Charlie4 DNA MER1_type -1744 217 185 1879 144 24 0 chr2 205888404 205888695 -44799159 - AluSx SINE Alu -14 298 1 452 227 72 87 chr2 205888695 205888868 -44798986 - Charlie4 DNA MER1_type -1776 185 14 251 343 35 7 chr2 205888948 205889091 -44798763 - L2 LINE L2 -222 3050 2904 564 317 80 18 chr2 205889316 205889540 -44798314 - ERVL LTR ERVL -2017 3747 3510 418 263 147 70 chr2 205889548 205889875 -44797979 - MLT1I LTR MaLR -6 403 52 593 240 177 6 chr2 205889898 205890073 -44797781 - ERVL LTR ERVL -2259 3505 3301 817 217 62 18 chr2 205890073 205890280 -44797574 + MER20 DNA MER1_type 4 219 0 803 277 25 90 chr2 205890299 205890430 -44797424 - ERVL LTR ERVL -2410 3244 3106 2463 80 3 0 chr2 205890430 205890731 -44797123 - AluSp SINE Alu -11 302 1 803 277 25 90 chr2 205890731 205890896 -44796958 - ERVL LTR ERVL -2548 3106 2932 2315 52 3 24 chr2 205890896 205891217 -44796637 - AluY SINE Alu 0 315 1 826 183 0 0 chr2 205891218 205891344 -44796510 - FLAM_A SINE Alu -7 126 1 803 277 25 90 chr2 205891344 205891400 -44796454 - ERVL LTR ERVL -2721 2933 2911 1793 189 3 0 chr2 205891400 205891707 -44796147 - AluJo SINE Alu -4 308 1 629 73 0 0 chr2 205891720 205891802 -44796052 - AluSp/q SINE Alu -9 304 223 669 117 117 0 chr2 205891803 205891931 -44795923 + L1MB2 LINE L1 6029 6171 0 860 131 7 36 chr2 205892159 205892296 -44795558 + FLAM_C SINE Alu 1 133 0 830 209 33 16 chr2 205892514 205892696 -44795158 + L1MC5 LINE L1 6685 6869 -1092 1034 235 34 17 chr2 205892698 205892932 -44794922 - MER68 LTR ERV1 -2 560 323 686 212 5 85 chr2 205892932 205893121 -44794733 - L1M4 LINE L1 -5829 713 540 2245 114 0 0 chr2 205893143 205893441 -44794413 - AluY SINE Alu -13 298 1 1664 246 113 69 chr2 205893668 205893757 -44794097 - L1MEc LINE L1 -5629 1493 1409 1846 108 0 0 chr2 205893757 205893997 -44793857 + AluSq SINE Alu 57 296 -17 1664 246 113 69 chr2 205893997 205894489 -44793365 - L1MEc LINE L1 -5713 1409 940 1925 160 6 10 chr2 205894489 205894801 -44793053 - AluJb SINE Alu -1 311 1 1664 246 113 69 chr2 205894801 205894843 -44793011 - L1MEc LINE L1 -6182 940 901 1689 162 4 0 chr2 205894843 205895108 -44792746 - AluJb SINE Alu -46 266 1 1664 246 113 69 chr2 205895108 205895181 -44792673 - L1MEc LINE L1 -6221 901 764 294 267 158 10 chr2 205895215 205895316 -44792538 - L1MEc LINE L1 -5486 937 822 2116 233 179 8 chr2 205895368 205896152 -44791702 - L1MCa LINE L1 -1571 5370 4453 2218 95 0 7 chr2 205896163 205896472 -44791382 - AluSx SINE Alu 0 307 1 867 120 0 0 chr2 205896509 205896634 -44791220 - AluSg/x SINE Alu -7 305 181 449 304 46 18 chr2 205896644 205896861 -44790993 - L1MCa LINE L1 -2535 4406 4184 1122 152 0 52 chr2 205896872 205897083 -44790771 - AluJo SINE Alu 0 312 113 850 120 0 67 chr2 205897124 205897274 -44790580 + FLAM_C SINE Alu 1 140 -3 789 248 111 58 chr2 205897339 205897472 -44790382 - L1MCa LINE L1 -3319 3622 3498 2221 89 3 19 chr2 205897472 205897785 -44790069 + AluSg SINE Alu 2 309 -1 789 248 111 58 chr2 205897785 205897974 -44789880 - L1MCa LINE L1 -3443 3498 3321 1477 161 128 4 chr2 205897974 205898144 -44789710 - AluJb SINE Alu -4 308 160 237 33 0 0 chr2 205898144 205898174 -44789680 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1477 161 128 4 chr2 205898174 205898277 -44789577 - AluJb SINE Alu -152 160 1 789 248 111 58 chr2 205898277 205898421 -44789433 - L1MCa LINE L1 -3620 3321 3130 503 233 108 36 chr2 205898440 205898500 -44789354 - L1MCa LINE L1 -4075 3047 2993 1427 102 75 66 chr2 205898500 205898726 -44789128 + MER30 DNA MER1_type 3 230 0 503 233 108 36 chr2 205898726 205898944 -44788910 - L1MCa LINE L1 -4129 2993 2749 498 290 62 45 chr2 205899113 205899630 -44788224 - L1MCa LINE L1 -4616 2506 1792 210 143 0 0 chr2 205899643 205899678 -44788176 + (TA)n Simple_repeat Simple_repeat 2 36 0 235 306 16 8 chr2 205899782 205899903 -44787951 - L1MCc LINE L1 -4694 2168 2047 246 163 23 0 chr2 205899903 205899946 -44787908 - tRNA-Met-e tRNA tRNA -31 44 1 363 288 46 44 chr2 205899948 205900261 -44787593 - L1MCc LINE L1 -4965 1458 1282 362 362 0 8 chr2 205901226 205901353 -44786501 - MIR SINE MIR -62 146 21 469 171 12 0 chr2 205901902 205901984 -44785870 + MER3 DNA MER1_type 5 87 -122 263 348 0 22 chr2 205902229 205902321 -44785533 + L2 LINE L2 3224 3313 0 22 56 0 0 chr2 205902373 205902409 -44785445 + AT_rich Low_complexity Low_complexity 1 36 0 504 280 26 43 chr2 205902409 205902640 -44785214 - MIR SINE MIR 0 262 35 627 216 36 0 chr2 205902745 205902856 -44784998 + FLAM_C SINE Alu 6 120 -23 822 169 8 0 chr2 205903107 205903231 -44784623 + FLAM_A SINE Alu 2 126 -7 2553 75 0 0 chr2 205903316 205903624 -44784230 + AluY SINE Alu 1 308 -3 9281 73 8 97 chr2 205903674 205905188 -44782666 - SVA Other Other 0 1386 8 214 296 0 0 chr2 205905262 205905316 -44782538 - MIR SINE MIR -78 130 77 400 303 111 50 chr2 205905397 205905809 -44782045 - L2 LINE L2 -69 3244 2799 389 298 82 38 chr2 205905839 205905997 -44781857 + MIR SINE MIR 49 213 -49 323 249 249 70 chr2 205905983 205906184 -44781670 - MIR SINE MIR -4 258 22 * 790 152 256 59 chr2 205906191 205906339 -44781515 + Charlie1b DNA MER1_type 37 154 -2607 2106 120 27 0 chr2 205906339 205906638 -44781216 + AluSx SINE Alu 1 307 -5 790 152 256 59 chr2 205906638 205906778 -44781076 + Charlie1b DNA MER1_type 154 382 -141 2358 78 3 3 chr2 205906937 205907231 -44780623 - AluSc SINE Alu -15 294 1 241 293 75 38 chr2 205907231 205907364 -44780490 + HsTC2 DNA Tc2 4 141 -1757 324 269 204 10 chr2 205907601 205907802 -44780052 + HsTC2 DNA Tc2 581 820 -1078 324 313 127 25 chr2 205907839 205908114 -44779740 - L2 LINE L2 -87 3226 2924 18479 36 2 1 chr2 205908220 205911096 -44776758 - L1PA4 LINE L1 -2 6153 3274 14423 45 3 1 chr2 205911096 205912849 -44775005 + L1P LINE L1 726 2482 -3664 244 274 11 63 chr2 205913142 205913237 -44774617 - MER5A DNA MER1_type -6 183 94 1468 185 7 49 chr2 205913285 205913420 -44774434 + AluJb SINE Alu 1 120 -192 2380 53 0 3 chr2 205913420 205913752 -44774102 + AluY SINE Alu 1 331 0 1468 185 7 49 chr2 205913752 205913902 -44773952 + AluJb SINE Alu 120 275 -37 198 0 0 0 chr2 205913905 205913927 -44773927 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 426 39 0 0 chr2 205913926 205913978 -44773876 + (CA)n Simple_repeat Simple_repeat 1 52 0 21 82 0 0 chr2 205914175 205914224 -44773630 + AT_rich Low_complexity Low_complexity 1 49 0 1230 144 24 34 chr2 205914246 205914454 -44773400 + AluJo SINE Alu 87 292 -20 309 332 79 13 chr2 205914470 205914699 -44773155 + L1MC4a LINE L1 4341 4584 -1562 2101 109 3 3 chr2 205914862 205915171 -44772683 + AluSx SINE Alu 1 309 0 2021 139 10 0 chr2 205915453 205915754 -44772100 - AluSp SINE Alu -9 304 1 287 259 122 50 chr2 205916064 205916245 -44771609 + L1MC4a LINE L1 5631 5838 -1970 2239 118 0 0 chr2 205916245 205916541 -44771313 + AluSx SINE Alu 1 296 -16 287 259 122 50 chr2 205916541 205916621 -44771233 + L1MC4a LINE L1 5838 5911 -1897 21 0 0 0 chr2 205916664 205916685 -44771169 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 205916765 205916803 -44771051 + AT_rich Low_complexity Low_complexity 1 38 0 930 211 0 0 chr2 205917020 205917191 -44770663 - AluJo SINE Alu -13 299 129 26167 53 11 1 chr2 205917191 205921195 -44766659 - L1PA6 LINE L1 -9 6145 2099 842 179 0 40 chr2 205921195 205921346 -44766508 - AluJo SINE Alu -166 146 2 298 107 36 0 chr2 205921630 205921686 -44766168 + CT-rich Low_complexity Low_complexity 1 58 0 303 348 36 29 chr2 205921707 205921845 -44766009 + L2 LINE L2 3134 3272 0 1833 142 25 14 chr2 205921989 205922290 -44765564 - AluJb SINE Alu 0 304 1 1662 176 10 3 chr2 205922619 205922915 -44764939 - AluJo SINE Alu -14 298 1 2325 95 3 3 chr2 205923753 205924057 -44763797 - AluSx SINE Alu -8 304 1 2202 103 0 7 chr2 205926062 205926353 -44761501 + AluSc SINE Alu 6 294 -15 533 320 81 38 chr2 205926404 205926801 -44761053 + L2 LINE L2 1487 1900 -1414 1612 176 36 16 chr2 205927010 205927316 -44760538 - AluJo SINE Alu 0 312 1 1824 174 0 13 chr2 205927349 205927653 -44760201 - AluJb SINE Alu -12 300 1 217 386 70 18 chr2 205928151 205928265 -44759589 + MIR3 SINE MIR 6 125 -83 736 219 68 0 chr2 205928285 205928431 -44759423 - FRAM SINE Alu -20 156 1 2216 122 0 10 chr2 205930223 205930535 -44757319 + AluSx SINE Alu 1 309 -3 1813 167 28 0 chr2 205930543 205930831 -44757023 + AluJb SINE Alu 1 296 -16 23 0 0 0 chr2 205930955 205930978 -44756876 + AT_rich Low_complexity Low_complexity 1 23 0 238 385 78 29 chr2 205930989 205931373 -44756481 - L2 LINE L2 -5 3267 2865 424 242 33 25 chr2 205932481 205932601 -44755253 + MIR SINE MIR 20 140 -122 795 204 31 0 chr2 205932754 205932950 -44754904 + L1M4 LINE L1 2822 3023 -3123 279 259 36 36 chr2 205932957 205933069 -44754785 + L1MA10 LINE L1 5976 6237 -79 2312 128 33 3 chr2 205933069 205933404 -44754450 - MER7A DNA MER2_type 0 346 4 437 149 46 0 chr2 205933444 205933531 -44754323 + L1MA10 LINE L1 6244 6334 0 557 310 28 44 chr2 205933557 205933918 -44753936 + L1MEc LINE L1 2055 2409 -3987 375 245 98 20 chr2 205933952 205934156 -44753698 + L1MEc LINE L1 2549 2768 -3447 343 250 57 40 chr2 205934161 205934285 -44753569 + MIR SINE MIR 124 249 -13 23 33 0 0 chr2 205934340 205934370 -44753484 + AT_rich Low_complexity Low_complexity 1 30 0 2083 115 0 29 chr2 205934399 205934711 -44753143 + AluSx SINE Alu 1 303 -9 232 241 27 54 chr2 205934711 205934823 -44753031 + MER113 DNA MER1_type? 413 521 0 379 319 138 24 chr2 205935354 205935564 -44752290 + MIR SINE MIR 23 256 -6 25 0 0 0 chr2 205935893 205935918 -44751936 + AT_rich Low_complexity Low_complexity 1 25 0 923 125 59 0 chr2 205936053 205936189 -44751665 - MSTA LTR MaLR 0 428 285 746 223 60 11 chr2 205936327 205936511 -44751343 + MIR SINE MIR 57 249 -13 449 237 172 47 chr2 205936606 205936838 -44751016 + LTR41 LTR ERVL 1 261 -534 366 169 51 22 chr2 205936934 205937053 -44750801 + LTR50 LTR ERVL 659 789 0 771 258 77 92 chr2 205937085 205937659 -44750195 - L1ME LINE L1 -344 5777 5196 738 151 65 0 chr2 205937659 205937798 -44750056 - L1MB3 LINE L1 0 6183 6036 771 258 77 92 chr2 205937798 205938110 -44749744 - L1ME LINE L1 -925 5196 4901 2372 82 0 0 chr2 205938110 205938404 -44749450 + AluY SINE Alu 2 295 -16 771 258 77 92 chr2 205938404 205938453 -44749401 - L1ME LINE L1 -1220 4901 4853 2513 158 57 0 chr2 205938768 205939173 -44748681 - MSTA LTR MaLR 0 428 1 321 276 167 21 chr2 205939224 205939325 -44748529 + L1MC4a LINE L1 5738 5823 -1985 2273 49 4 0 chr2 205939325 205939589 -44748265 - AluSp SINE Alu -48 265 1 321 276 167 21 chr2 205939589 205939679 -44748175 + L1MC4a LINE L1 5823 5957 -1851 260 211 0 19 chr2 205940519 205940571 -44747283 + MIR SINE MIR 96 146 -116 1883 147 3 20 chr2 205940808 205941100 -44746754 - AluSx SINE Alu -21 291 5 2387 76 0 10 chr2 205941299 205941603 -44746251 + AluY SINE Alu 1 301 -10 23 68 0 0 chr2 205942194 205942238 -44745616 + AT_rich Low_complexity Low_complexity 1 44 0 456 187 0 0 chr2 205942267 205942342 -44745512 + MER116 DNA Mariner 6 80 0 328 202 30 135 chr2 205942348 205942489 -44745365 - L1ME LINE L1 -333 5829 5702 841 163 0 0 chr2 205942545 205942668 -44745186 + FLAM_C SINE Alu 1 123 -20 829 311 30 11 chr2 205942670 205943036 -44744818 - L1ME LINE L1 -494 5668 5296 2062 117 20 3 chr2 205943171 205943469 -44744385 - AluSx SINE Alu -9 303 1 1070 294 79 38 chr2 205943655 205944212 -44743642 - L2 LINE L2 -2009 1305 726 335 202 64 11 chr2 205944250 205944344 -44743510 + L1ME4a LINE L1 6021 6119 -2 27 87 0 0 chr2 205944676 205944745 -44743109 + AT_rich Low_complexity Low_complexity 1 69 0 2514 73 0 0 chr2 205944887 205945188 -44742666 + AluY SINE Alu 1 301 -10 805 189 0 21 chr2 205945212 205945355 -44742499 + AluJb SINE Alu 156 295 -17 237 303 69 41 chr2 205945518 205945663 -44742191 + L3 LINE CR1 1280 1428 -149 1868 137 7 0 chr2 205946679 205946949 -44740905 + AluSx SINE Alu 39 310 -2 2888 78 128 2 chr2 205947456 205947854 -44740000 - LTR7 LTR ERV1 -2 448 1 4158 119 16 12 chr2 205948417 205948995 -44738859 - LTR19B LTR ERV1 0 580 1 267 327 27 0 chr2 205949276 205949386 -44738468 + MIR3 SINE MIR 88 200 -8 508 154 46 85 chr2 205949728 205949858 -44737996 + MLT1K LTR MaLR 447 571 -17 1949 161 0 0 chr2 205949879 205950170 -44737684 - AluSx SINE Alu -21 291 1 1827 163 14 3 chr2 205950556 205950844 -44737010 + AluJb SINE Alu 1 291 -21 1695 167 10 27 chr2 205950937 205951237 -44736617 + AluJb SINE Alu 1 295 -17 2025 100 50 14 chr2 205951593 205951874 -44735980 - AluSx SINE Alu -21 291 1 233 337 20 10 chr2 205952174 205952272 -44735582 - L2 LINE L2 -185 3087 2989 528 320 41 15 chr2 205952312 205952509 -44735345 + MIR SINE MIR 23 224 -38 1063 184 0 0 chr2 205952780 205952943 -44734911 - FRAM SINE Alu -21 155 1 252 115 62 52 chr2 205952947 205953043 -44734811 + (TTAAA)n Simple_repeat Simple_repeat 5 101 0 5151 155 6 22 chr2 205953048 205953212 -44734642 + L1MA6 LINE L1 4451 4616 -1530 772 172 0 0 chr2 205953212 205953357 -44734497 + FLAM_A SINE Alu 1 145 0 5151 155 6 22 chr2 205953357 205954147 -44733707 + L1MA6 LINE L1 4616 5391 -755 4696 144 31 52 chr2 205956861 205956909 -44730945 + L1MA6 LINE L1 5394 5441 -859 2251 115 13 0 chr2 205956909 205957214 -44730640 + AluSx SINE Alu 1 309 -3 4696 144 31 52 chr2 205957214 205957882 -44729972 + L1MA6 LINE L1 5441 6089 -211 626 244 0 0 chr2 205957882 205958001 -44729853 + FLAM_A SINE Alu 1 119 -14 4696 144 31 52 chr2 205958001 205958207 -44729647 + L1MA6 LINE L1 6089 6298 -2 26 0 0 0 chr2 205958284 205958310 -44729544 + AT_rich Low_complexity Low_complexity 1 26 0 337 225 13 106 chr2 205958310 205958461 -44729393 + L2 LINE L2 3161 3297 -16 250 287 122 35 chr2 205958737 205958852 -44729002 - L2 LINE L2 -2 3270 3146 253 264 147 0 chr2 205959236 205959365 -44728489 + L2 LINE L2 3166 3313 0 483 155 0 0 chr2 205959365 205959449 -44728405 + (TGGA)n Simple_repeat Simple_repeat 2 85 0 25 31 0 0 chr2 205959535 205959567 -44728287 + AT_rich Low_complexity Low_complexity 1 32 0 237 312 0 0 chr2 205960094 205960171 -44727683 + A-rich Low_complexity Low_complexity 1 77 0 2140 125 3 0 chr2 205960180 205960475 -44727379 + AluSx SINE Alu 1 296 -16 250 294 98 35 chr2 205960596 205960754 -44727100 - MIR SINE MIR -67 141 20 1683 120 94 23 chr2 205961214 205961386 -44726468 - AluSq SINE Alu 0 330 172 2421 75 0 3 chr2 205961386 205961681 -44726173 - AluSc SINE Alu -15 294 1 1683 120 94 23 chr2 205961681 205961819 -44726035 - AluSq SINE Alu -158 172 1 472 191 0 12 chr2 205962431 205962515 -44725339 + FLAM_A SINE Alu 35 117 -25 398 199 6 19 chr2 205962515 205962671 -44725183 + (TA)n Simple_repeat Simple_repeat 1 154 0 23 33 0 0 chr2 205962688 205962718 -44725136 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr2 205963137 205963161 -44724693 + AT_rich Low_complexity Low_complexity 1 24 0 2064 142 0 19 chr2 205963627 205963944 -44723910 + AluJb SINE Alu 1 311 -1 584 278 39 39 chr2 205964456 205964686 -44723168 + MIR SINE MIR 18 247 -15 2449 89 0 0 chr2 205965551 205965853 -44722001 + AluSx SINE Alu 1 302 -10 640 266 205 15 chr2 205965912 205966254 -44721600 + L1MC4a LINE L1 5650 6056 -1752 21 36 0 0 chr2 205966278 205966306 -44721548 + AT_rich Low_complexity Low_complexity 1 28 0 204 40 0 0 chr2 205966822 205966847 -44721007 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 1796 98 4 4 chr2 205967007 205967242 -44720612 + AluSx SINE Alu 1 235 -77 23 0 0 0 chr2 205967242 205967265 -44720589 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 205967335 205967356 -44720498 + AT_rich Low_complexity Low_complexity 1 21 0 190 279 0 0 chr2 205967434 205967477 -44720377 + L3 LINE CR1 1528 1570 -7 198 0 0 0 chr2 205967662 205967684 -44720170 + (TG)n Simple_repeat Simple_repeat 2 23 0 1713 125 111 11 chr2 205967828 205968107 -44719747 + AluSx SINE Alu 1 307 -5 1625 236 13 97 chr2 205968718 205969285 -44718569 + L1MC4 LINE L1 7092 7606 -436 2190 132 3 0 chr2 205969285 205969588 -44718266 + AluSx SINE Alu 2 305 -7 1625 236 13 97 chr2 205969588 205969627 -44718227 + L1MC4 LINE L1 7606 7647 -395 195 42 0 0 chr2 205969627 205969651 -44718203 + (TATTG)n Simple_repeat Simple_repeat 2 25 0 890 135 15 0 chr2 205969656 205969789 -44718065 - FLAM_C SINE Alu -8 135 1 1001 261 3 17 chr2 205969808 205970107 -44717747 + L1MC4 LINE L1 7653 7947 -95 416 206 20 82 chr2 205970100 205970246 -44717608 + L1MC4 LINE L1 7906 8042 0 * 2598 55 0 6 chr2 205970318 205970629 -44717225 + AluY SINE Alu 1 309 -2 2401 99 0 10 chr2 205970633 205970947 -44716907 + AluSx SINE Alu 1 311 -1 2435 176 25 13 chr2 205970952 205971428 -44716426 + L1MB3 LINE L1 5302 5783 -388 380 188 0 0 chr2 205971428 205971492 -44716362 - MER6 DNA MER2_type 0 865 802 388 76 0 165 chr2 205971497 205971525 -44716329 + MER6 DNA MER2_type 738 769 -96 2149 137 0 0 chr2 205971525 205971825 -44716029 - AluSx SINE Alu -12 300 1 388 76 0 165 chr2 205971825 205971875 -44715979 + MER6 DNA MER2_type 769 803 -62 875 152 0 28 chr2 205971881 205972026 -44715828 + FLAM_C SINE Alu 1 141 -2 266 156 53 10 chr2 205972028 205972098 -44715756 + MER6 DNA MER2_type 795 864 -1 2490 137 5 5 chr2 205972098 205972499 -44715355 + L1MB3 LINE L1 5781 6181 -2 347 220 68 114 chr2 205972757 205972889 -44714965 - MER45A DNA AcHobo -51 127 2 290 162 84 214 chr2 205973048 205973202 -44714652 - MER63 DNA MER1_type -76 760 1 826 105 0 0 chr2 205973366 205973480 -44714374 + AluSc SINE Alu 185 298 -11 2020 117 69 0 chr2 205973786 205974076 -44713778 + AluSx SINE Alu 1 310 -2 2382 95 3 0 chr2 205974081 205974386 -44713468 + AluY SINE Alu 1 306 -5 315 0 0 0 chr2 205975035 205975070 -44712784 + (CA)n Simple_repeat Simple_repeat 2 36 0 677 228 149 9 chr2 205975144 205975372 -44712482 - MIR SINE MIR -1 261 2 534 242 32 0 chr2 205975464 205975588 -44712266 + L2 LINE L2 3185 3312 -1 2178 105 0 14 chr2 205975650 205975959 -44711895 + AluSx SINE Alu 1 305 0 622 213 84 7 chr2 205976427 205976582 -44711272 - MIR SINE MIR -83 179 13 2031 113 14 7 chr2 205976732 205977045 -44710809 - AluSx SINE Alu 0 315 1 2268 96 0 0 chr2 205977996 205978277 -44709577 + AluSq SINE Alu 1 281 -32 246 32 0 0 chr2 205978277 205978308 -44709546 + (TAA)n Simple_repeat Simple_repeat 1 31 0 2200 202 84 86 chr2 205978834 205979151 -44708703 + L1MC5 LINE L1 6664 6980 -981 1981 144 0 7 chr2 205979151 205979442 -44708412 - AluJb SINE Alu -23 289 1 2200 202 84 86 chr2 205979442 205979592 -44708262 + L1MC5 LINE L1 6980 7129 -832 1980 147 13 13 chr2 205979592 205979904 -44707950 + AluSx SINE Alu 1 312 0 2200 202 84 86 chr2 205979904 205979986 -44707868 + L1MC5 LINE L1 7129 7210 -751 2282 117 0 3 chr2 205979986 205980285 -44707569 + AluSq SINE Alu 1 298 -15 2200 202 84 86 chr2 205980285 205980665 -44707189 + L1MC5 LINE L1 7210 7523 -438 2309 117 0 0 chr2 205980678 205980986 -44706868 + AluSx SINE Alu 1 308 -4 429 351 40 24 chr2 205981009 205981257 -44706597 - MIR SINE MIR -10 252 1 2225 111 0 3 chr2 205982170 205982468 -44705386 + AluSx SINE Alu 1 297 -15 1271 174 0 22 chr2 205983942 205984172 -44703682 + AluJb SINE Alu 82 306 -6 477 91 0 0 chr2 205984253 205984319 -44703535 + MER41A LTR ERV1 400 465 -89 2077 147 0 0 chr2 205984538 205984845 -44703009 + AluJb SINE Alu 5 311 -1 1507 161 0 42 chr2 205984993 205985301 -44702553 + AluSx SINE Alu 33 329 0 1899 89 0 8 chr2 205986398 205986644 -44701210 - AluSg SINE Alu -66 244 1 192 179 0 0 chr2 205986711 205986750 -44701104 + A-rich Low_complexity Low_complexity 1 39 0 694 221 77 15 chr2 205986925 205987120 -44700734 - MIR SINE MIR -27 235 29 1956 121 48 3 chr2 205987312 205987601 -44700253 + AluSg SINE Alu 1 302 -8 2189 107 13 0 chr2 205987611 205987909 -44699945 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr2 205988142 205988163 -44699691 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 205988224 205988249 -44699605 + AT_rich Low_complexity Low_complexity 1 25 0 322 312 29 17 chr2 205988459 205988632 -44699222 - MIR SINE MIR -81 181 7 2259 97 7 0 chr2 205989192 205989482 -44698372 + AluSp SINE Alu 1 292 -21 5555 106 242 17 chr2 205989677 205990494 -44697360 - MER52C LTR ERV1 0 1278 646 3383 118 12 6 chr2 205990494 205991002 -44696852 + MER9 LTR ERVK 1 511 0 5555 106 242 17 chr2 205991002 205991227 -44696627 - MER52C LTR ERV1 -632 646 2 707 172 0 16 chr2 205991392 205991520 -44696334 + FLAM_A SINE Alu 2 127 -6 2332 86 33 7 chr2 205991688 205991992 -44695862 + AluSq SINE Alu 1 312 -1 196 133 33 0 chr2 205992008 205992068 -44695786 + (TA)n Simple_repeat Simple_repeat 2 63 0 37 76 0 0 chr2 205992068 205992147 -44695707 + AT_rich Low_complexity Low_complexity 1 79 0 1783 168 0 10 chr2 205992184 205992476 -44695378 - AluJo SINE Alu -23 289 1 1092 153 25 68 chr2 205992701 205992937 -44694917 + MER50 LTR ERV1 1 226 -508 * 1624 135 31 85 chr2 205992934 205993098 -44694756 + MER50 LTR ERV1 433 573 -161 1717 118 0 13 chr2 205993098 205993336 -44694518 - AluSx SINE Alu -77 235 1 1624 135 31 85 chr2 205993336 205993490 -44694364 + MER50 LTR ERV1 573 734 0 1996 149 0 0 chr2 205993520 205993816 -44694038 - AluJb SINE Alu -16 296 1 2284 189 52 8 chr2 205993852 205994307 -44693547 - MER41B LTR ERV1 -19 582 100 2438 209 66 45 chr2 205994353 205994482 -44693372 + L1MB7 LINE L1 4581 4706 -1440 766 151 56 0 chr2 205994482 205994608 -44693246 + FLAM_C SINE Alu 1 133 0 2438 209 66 45 chr2 205994608 205995188 -44692666 + L1MB7 LINE L1 4706 5309 -837 2335 104 0 0 chr2 205995188 205995485 -44692369 + AluSx SINE Alu 3 299 -13 2438 209 66 45 chr2 205995485 205995516 -44692338 + L1MB7 LINE L1 5309 5338 -808 2105 114 0 41 chr2 205995516 205995651 -44692203 + AluSx SINE Alu 1 140 -172 2502 60 0 0 chr2 205995651 205995949 -44691905 + AluY SINE Alu 1 298 -13 2105 114 0 41 chr2 205995949 205996130 -44691724 + AluSx SINE Alu 140 304 -8 3439 166 42 3 chr2 205996130 205996749 -44691105 + L1MB7 LINE L1 5526 6168 -16 2365 102 18 0 chr2 205997501 205997836 -44690018 - L1PA10 LINE L1 -14 6154 5814 2362 100 30 0 chr2 205997853 205998192 -44689662 - L1PB1 LINE L1 -5 6146 5798 225 313 27 20 chr2 205998332 205998479 -44689375 + L1ME4a LINE L1 5835 5982 -139 10568 97 16 2 chr2 205998891 206000873 -44686981 - L1P4 LINE L1 -359 5809 3799 2234 89 3 0 chr2 206000884 206001196 -44686658 - AluY SINE Alu 0 313 1 315 291 17 93 chr2 206001264 206001436 -44686418 - MLT1J LTR MaLR -72 439 281 1825 166 0 7 chr2 206001631 206001926 -44685928 - AluJo SINE Alu -9 303 11 24 32 0 0 chr2 206002077 206002108 -44685746 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 206002149 206002172 -44685682 + AT_rich Low_complexity Low_complexity 1 23 0 6639 74 17 13 chr2 206002173 206003570 -44684284 + SVA Other Other 17 1379 -7 2062 95 3 3 chr2 206003586 206003916 -44683938 + AluSq SINE Alu 1 330 0 1450 202 47 24 chr2 206004063 206004404 -44683450 + MLT1A1 LTR MaLR 10 358 -7 3160 96 36 2 chr2 206004404 206004842 -44683012 + MLT2A2 LTR ERVL 1 453 0 1520 177 3 45 chr2 206004864 206005174 -44682680 - AluSx SINE Alu -15 297 1 713 320 81 17 chr2 206005913 206006391 -44681463 + L1ME4a LINE L1 5373 5896 -225 27 0 0 0 chr2 206006697 206006724 -44681130 + AT_rich Low_complexity Low_complexity 1 27 0 1827 122 59 3 chr2 206006770 206007057 -44680797 + AluSx SINE Alu 1 303 -9 2245 105 0 3 chr2 206007110 206007424 -44680430 + AluSq SINE Alu 1 313 0 2246 103 0 3 chr2 206007443 206007755 -44680099 + AluSx SINE Alu 1 311 -1 1156 191 5 0 chr2 206007768 206007983 -44679871 - AluJo SINE Alu -11 301 86 1463 189 45 76 chr2 206009071 206009451 -44678403 + MLT1F LTR MaLR 175 542 0 2216 93 7 0 chr2 206009550 206009841 -44678013 + AluSx SINE Alu 1 293 -19 2204 80 0 0 chr2 206009989 206010265 -44677589 + AluSx SINE Alu 10 285 -27 330 26 0 0 chr2 206010269 206010308 -44677546 + (TAA)n Simple_repeat Simple_repeat 2 40 0 247 277 60 0 chr2 206010341 206010424 -44677430 + L1ME LINE L1 5532 5619 -502 185 286 16 32 chr2 206010920 206010983 -44676871 + MIR3 SINE MIR 12 73 -135 199 258 140 0 chr2 206011412 206011482 -44676372 + MIR SINE MIR 83 145 -63 1283 127 14 14 chr2 206011482 206011694 -44676160 + AluJo SINE Alu 1 212 -100 1762 145 28 0 chr2 206011717 206011999 -44675855 + AluJb SINE Alu 1 290 -22 664 250 18 6 chr2 206012800 206012964 -44674890 + MER103 DNA DNA 1 166 0 694 177 16 16 chr2 206013106 206013230 -44674624 + AluJo/FLAM SINE Alu 8 131 -181 1542 216 0 3 chr2 206013233 206013543 -44674311 + AluJb SINE Alu 1 309 -3 2199 77 7 10 chr2 206013594 206013891 -44673963 + AluSx SINE Alu 1 296 -16 281 286 0 0 chr2 206014305 206014368 -44673486 + L2 LINE L2 3250 3312 -1 438 263 53 9 chr2 206014531 206014645 -44673209 - L2 LINE L2 0 3313 3195 301 256 190 8 chr2 206014648 206014769 -44673085 + MIR SINE MIR 9 151 -111 2023 118 9 16 chr2 206014769 206015084 -44672770 + AluSq SINE Alu 1 313 0 1290 96 11 0 chr2 206015084 206015262 -44672592 + AluSc SINE Alu 130 309 0 397 252 47 9 chr2 206015314 206015421 -44672433 + MIR SINE MIR 139 249 -13 581 275 31 0 chr2 206016653 206016813 -44671041 - MIR SINE MIR 0 262 98 35 0 0 0 chr2 206016825 206016860 -44670994 + AT_rich Low_complexity Low_complexity 1 35 0 2144 89 0 40 chr2 206016862 206017188 -44670666 + AluSq SINE Alu 1 313 0 291 260 13 0 chr2 206017188 206017265 -44670589 - MIR SINE MIR -151 111 34 1077 253 49 23 chr2 206018271 206018629 -44669225 + MLT1J2 LTR MaLR 1 385 -61 1371 156 137 4 chr2 206018643 206018810 -44669044 - AluJb SINE Alu -2 300 157 2201 96 0 0 chr2 206018810 206019101 -44668753 - AluSg SINE Alu -16 294 4 1371 156 137 4 chr2 206019101 206019196 -44668658 - AluJb SINE Alu -145 157 3 23 33 0 0 chr2 206019602 206019632 -44668222 + AT_rich Low_complexity Low_complexity 1 30 0 478 128 0 23 chr2 206020771 206020857 -44666997 + AluS SINE Alu 223 306 -3 354 244 66 89 chr2 206020857 206021070 -44666784 + L1ME4a LINE L1 5856 6063 -58 2186 99 0 0 chr2 206021276 206021570 -44666284 - AluSg SINE Alu -16 294 1 1992 119 0 0 chr2 206021633 206021911 -44665943 - AluSx SINE Alu -34 278 1 1858 148 3 17 chr2 206022577 206022711 -44665143 + AluSx SINE Alu 2 136 -176 2135 125 0 0 chr2 206022711 206023023 -44664831 + AluSx SINE Alu 1 312 0 1858 148 3 17 chr2 206023023 206023186 -44664668 + AluSx SINE Alu 136 295 -17 2028 123 0 22 chr2 206024005 206024322 -44663532 + AluSq SINE Alu 1 310 -3 904 212 79 12 chr2 206024471 206024712 -44663142 + MIR SINE MIR 3 259 -3 1970 106 42 0 chr2 206025193 206025476 -44662378 - AluSg SINE Alu -15 295 1 2053 107 34 0 chr2 206025667 206025958 -44661896 - AluSp SINE Alu -12 301 1 2273 85 3 0 chr2 206026259 206026554 -44661300 + AluSp SINE Alu 1 296 -17 341 281 93 14 chr2 206026616 206026755 -44661099 + MIR3 SINE MIR 42 191 -17 22 0 0 0 chr2 206026846 206026868 -44660986 + AT_rich Low_complexity Low_complexity 1 22 0 1882 145 7 3 chr2 206026868 206027164 -44660690 - AluJb SINE Alu -15 297 1 392 100 17 17 chr2 206027193 206027253 -44660601 - U7 snRNA snRNA -2 61 2 278 336 85 27 chr2 206027564 206027823 -44660031 + L1MC4a LINE L1 5685 5958 -1850 2046 104 7 3 chr2 206027919 206028207 -44659647 - AluSq SINE Alu -22 291 3 621 155 106 88 chr2 206028335 206028561 -44659293 + L1ME4a LINE L1 5875 6104 -17 22 70 0 0 chr2 206028983 206029026 -44658828 + GC_rich Low_complexity Low_complexity 1 43 0 7225 87 4 1 chr2 206029190 206030156 -44657698 - LTR5 LTR ERVK 0 969 1 1670 151 17 7 chr2 206033231 206033522 -44654332 + AluJo SINE Alu 1 294 -18 22 70 0 0 chr2 206034141 206034184 -44653670 + AT_rich Low_complexity Low_complexity 1 43 0 2046 114 0 0 chr2 206034454 206034801 -44653053 - AluSx SINE Alu 0 351 5 2121 103 7 3 chr2 206034839 206035131 -44652723 - AluSx SINE Alu -19 293 1 2295 76 7 3 chr2 206035205 206035509 -44652345 - AluY SINE Alu -6 305 1 226 200 200 0 chr2 206036507 206036552 -44651302 - MER5A DNA MER1_type -126 63 10 225 0 0 0 chr2 206036702 206036727 -44651127 + (TA)n Simple_repeat Simple_repeat 1 25 0 201 74 0 0 chr2 206037141 206037168 -44650686 + (TAA)n Simple_repeat Simple_repeat 2 28 0 443 288 39 39 chr2 206037201 206037354 -44650500 - MIR SINE MIR -50 212 60 521 141 24 0 chr2 206037354 206037479 -44650375 + FRAM SINE Alu 62 188 0 2010 138 3 0 chr2 206037622 206037919 -44649935 + AluSx SINE Alu 1 298 -14 2276 98 0 13 chr2 206038492 206038808 -44649046 + AluSx SINE Alu 1 312 0 21 36 0 0 chr2 206040982 206041010 -44646844 + AT_rich Low_complexity Low_complexity 1 28 0 225 221 73 44 chr2 206041554 206041622 -44646232 + L1MEd LINE L1 495 564 -5555 798 187 0 0 chr2 206041660 206041783 -44646071 - FLAM_C SINE Alu -18 125 3 4847 25 2 2 chr2 206042562 206043120 -44644734 + LTR6B LTR ERV1 1 558 0 323 176 0 0 chr2 206043216 206043267 -44644587 - MER81 DNA DNA -63 51 1 193 305 57 72 chr2 206043645 206043924 -44643930 + L2 LINE L2 1597 1871 -1443 1230 170 9 13 chr2 206043942 206044171 -44643683 - MER96B DNA MER1_type? -189 228 1 250 266 51 93 chr2 206044173 206044410 -44643444 + L2 LINE L2 1875 2101 -1213 1973 120 0 3 chr2 206044523 206044835 -44643019 + AluSq SINE Alu 1 311 0 1242 155 73 121 chr2 206045482 206045863 -44641991 + MLT1A1 LTR MaLR 1 363 -2 250 165 94 47 chr2 206047562 206047647 -44640207 - L1ME4a LINE L1 -4 6117 6029 445 111 0 0 chr2 206048859 206048922 -44638932 + AluSp/q SINE Alu 188 250 -63 1126 162 27 5 chr2 206048922 206049144 -44638710 + AluJo SINE Alu 85 311 -1 186 43 0 0 chr2 206049687 206049710 -44638144 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 313 311 59 8 chr2 206049828 206049947 -44637907 + L2 LINE L2 3181 3305 -8 2292 86 3 0 chr2 206051103 206051407 -44636447 + AluSp SINE Alu 1 305 -8 217 185 0 37 chr2 206052528 206052582 -44635272 + (CGGGG)n Simple_repeat Simple_repeat 5 56 0 2260 79 13 0 chr2 206053069 206053374 -44634480 - AluSg SINE Alu 0 310 2 1940 116 6 38 chr2 206053446 206053764 -44634090 - AluJb SINE Alu 0 312 5 241 192 19 0 chr2 206053823 206053875 -44633979 - L1MC4 LINE L1 -3 8039 7987 1160 204 180 53 chr2 206053889 206054267 -44633587 + L1M4b LINE L1 22 447 -6412 765 244 87 38 chr2 206054299 206054586 -44633268 - HAL1 LINE L1 -246 2261 1961 1281 123 32 184 chr2 206054588 206054799 -44633055 - AluJb SINE Alu -14 298 57 2401 97 0 3 chr2 206054799 206055109 -44632745 + AluSg1 SINE Alu 1 309 0 306 0 0 0 chr2 206055110 206055144 -44632710 + (TA)n Simple_repeat Simple_repeat 2 35 0 1281 123 32 184 chr2 206055144 206055272 -44632582 - AluJb SINE Alu -254 58 9 267 317 21 42 chr2 206055487 206055629 -44632225 + LTR16C LTR ERVL 45 183 -308 1017 281 43 66 chr2 206055680 206055889 -44631965 - MER115 DNA AcHobo -307 386 189 2138 146 0 0 chr2 206055889 206056191 -44631663 - AluSx SINE Alu -10 302 1 1017 281 43 66 chr2 206056191 206056376 -44631478 - MER115 DNA AcHobo -504 189 1 851 219 11 11 chr2 206056447 206056625 -44631229 + MER5B DNA MER1_type 1 178 0 242 286 29 29 chr2 206056653 206056758 -44631096 - MIR SINE MIR -56 152 48 1680 208 0 0 chr2 206056899 206057187 -44630667 + AluJb SINE Alu 1 288 -24 1864 49 0 22 chr2 206057221 206057383 -44630471 - AluSc SINE Alu -16 293 136 2530 72 0 3 chr2 206057383 206057687 -44630167 - AluSg SINE Alu -7 303 1 1864 49 0 22 chr2 206057687 206057747 -44630107 - AluSc SINE Alu -173 136 76 2557 132 53 14 chr2 206057801 206058217 -44629637 + MSTB1 LTR MaLR 1 432 0 791 217 70 53 chr2 206058328 206058532 -44629322 + MIR SINE MIR 2 212 -50 1713 161 7 21 chr2 206058532 206058818 -44629036 + AluJo SINE Alu 1 282 -30 791 217 70 53 chr2 206058818 206058857 -44628997 + MIR SINE MIR 212 249 -13 252 250 66 0 chr2 206058862 206058938 -44628916 - L2 LINE L2 -34 3279 3199 2333 98 0 13 chr2 206059023 206059340 -44628514 - AluSq SINE Alu 0 313 1 1162 189 0 9 chr2 206059341 206059553 -44628301 - AluJo SINE Alu -9 303 94 22 0 0 0 chr2 206059563 206059585 -44628269 + AT_rich Low_complexity Low_complexity 1 22 0 261 122 41 0 chr2 206059613 206059662 -44628192 - L2 LINE L2 0 3313 3263 1893 145 54 0 chr2 206059678 206059974 -44627880 + AluSx SINE Alu 1 312 0 1676 182 7 24 chr2 206060130 206060426 -44627428 + AluJo SINE Alu 19 309 -3 2117 202 113 35 chr2 206060724 206061274 -44626580 + MLT1E LTR MaLR 1 593 0 1937 131 47 3 chr2 206061415 206061712 -44626142 - AluSx SINE Alu -2 310 1 1421 210 11 4 chr2 206061740 206062012 -44625842 + AluSx SINE Alu 2 275 -37 1574 193 30 7 chr2 206062376 206062681 -44625173 + AluJo SINE Alu 1 312 0 389 222 176 0 chr2 206062701 206062809 -44625045 + L2 LINE L2 3183 3309 -4 2206 106 0 3 chr2 206063150 206063434 -44624420 + AluSc SINE Alu 1 283 -26 189 0 0 0 chr2 206063434 206063455 -44624399 + (CAAT)n Simple_repeat Simple_repeat 2 22 0 298 277 77 46 chr2 206063890 206064020 -44623834 + L2 LINE L2 3180 3313 0 212 277 80 58 chr2 206064053 206064190 -44623664 + MER5B DNA MER1_type 2 141 -37 453 130 0 13 chr2 206064199 206064276 -44623578 + L1MC4 LINE L1 7967 8042 0 675 311 181 8 chr2 206064288 206064648 -44623206 + HAL1 LINE L1 347 768 -1739 21 0 0 0 chr2 206064670 206064691 -44623163 + AT_rich Low_complexity Low_complexity 1 21 0 1254 126 0 0 chr2 206064785 206064952 -44622902 - AluSq SINE Alu -18 295 129 2127 76 41 28 chr2 206065034 206065325 -44622529 - AluYa5 SINE Alu -16 295 1 29 0 0 0 chr2 206065325 206065354 -44622500 + AT_rich Low_complexity Low_complexity 1 29 0 1688 187 14 0 chr2 206065354 206065643 -44622211 + AluSx SINE Alu 1 293 -19 244 171 0 0 chr2 206065685 206065726 -44622128 - Alu SINE Alu -254 46 6 1880 153 18 0 chr2 206066998 206067280 -44620574 - AluJo SINE Alu -25 287 1 363 71 0 9 chr2 206067443 206067497 -44620357 - AluSg/x SINE Alu -52 248 204 1086 83 0 0 chr2 206067669 206067802 -44620052 - AluSq/x SINE Alu -180 133 1 1280 170 34 0 chr2 206067830 206068065 -44619789 - L1PA16 LINE L1 -1 6165 5923 1404 217 71 16 chr2 206068065 206068443 -44619411 - LTR38B LTR ERV1 0 610 212 1325 172 46 67 chr2 206068446 206068731 -44619123 + AluJb SINE Alu 1 279 -33 344 243 118 35 chr2 206068756 206068861 -44618993 - LTR38 LTR ERV1 -400 156 34 2400 74 13 3 chr2 206068861 206069159 -44618695 + AluSc SINE Alu 1 301 -8 344 243 118 35 chr2 206069159 206069197 -44618657 - LTR38 LTR ERV1 -522 34 1 361 237 271 11 chr2 206069281 206069458 -44618396 + MIR SINE MIR 15 237 -25 2194 101 3 3 chr2 206069613 206069900 -44617954 + AluSp SINE Alu 1 287 -26 1792 112 29 29 chr2 206070048 206070326 -44617528 - MER50 LTR ERV1 -24 710 433 1418 134 22 13 chr2 206070324 206070556 -44617298 - MER50 LTR ERV1 -500 234 1 * 768 99 0 0 chr2 206070576 206070677 -44617177 - AluSg/x SINE Alu -16 294 194 2148 117 17 3 chr2 206070677 206070977 -44616877 - AluSg SINE Alu -6 304 1 2013 111 10 42 chr2 206070977 206071282 -44616572 - AluSx SINE Alu -15 297 2 1173 198 53 24 chr2 206071293 206071540 -44616314 + MER21-int LTR ERV1 3883 4136 -55 2160 154 5 22 chr2 206072037 206072408 -44615446 - MER47A DNA MER2_type 0 366 2 1276 241 83 45 chr2 206072573 206073000 -44614854 + MER77 LTR ERV1 182 673 -1 758 189 0 8 chr2 206073324 206073456 -44614398 + FLAM_A SINE Alu 1 131 -2 1703 171 3 28 chr2 206073458 206073745 -44614109 + AluJo SINE Alu 1 280 -32 180 158 0 0 chr2 206073748 206073786 -44614068 + (CATA)n Simple_repeat Simple_repeat 1 38 0 2034 151 0 0 chr2 206074312 206074604 -44613250 - AluSx SINE Alu -20 292 1 368 43 0 0 chr2 206074666 206074713 -44613141 + AluY SINE Alu 1 47 -261 2574 144 28 58 chr2 206174839 206175421 -44512433 + Charlie5 DNA MER1_type 1712 2275 -337 1954 233 62 20 chr2 206175421 206175718 -44512136 - LTR40a LTR ERVL 0 519 191 2175 198 50 24 chr2 206175718 206176178 -44511676 - MER70A LTR ERVL 0 472 1 1954 233 62 20 chr2 206176178 206176378 -44511476 - LTR40a LTR ERVL -328 191 1 634 142 79 0 chr2 206176379 206176506 -44511348 + Charlie5 DNA MER1_type 2272 2408 -204 7585 58 7 10 chr2 206178276 206179315 -44508539 - L1P LINE L1 -1449 4697 3662 405 276 203 28 chr2 206180048 206180403 -44507451 - L2 LINE L2 -661 2653 2237 520 214 30 8 chr2 206180469 206180600 -44507254 + AluSg/x SINE Alu 134 267 -45 4655 194 42 10 chr2 206181115 206181471 -44506383 + Charlie5 DNA MER1_type 538 881 -1743 342 0 0 0 chr2 206181471 206181509 -44506345 + (CA)n Simple_repeat Simple_repeat 2 39 0 4655 194 42 10 chr2 206181509 206181848 -44506006 + Charlie5 DNA MER1_type 881 1208 -1416 2121 112 0 3 chr2 206181848 206182161 -44505693 - AluSx SINE Alu 0 312 1 4655 194 42 10 chr2 206182161 206182542 -44505312 + Charlie5 DNA MER1_type 1208 1650 -974 1365 251 81 51 chr2 206182659 206183510 -44504344 - L2 LINE L2 -22 3291 2404 2269 102 3 0 chr2 206183635 206183930 -44503924 - AluSp SINE Alu -17 296 1 211 333 19 48 chr2 206183934 206184039 -44503815 - L2 LINE L2 -30 3242 3141 231 36 0 0 chr2 206184153 206184181 -44503673 + (T)n Simple_repeat Simple_repeat 1 28 0 29 0 0 0 chr2 206184305 206184334 -44503520 + AT_rich Low_complexity Low_complexity 1 29 0 7051 53 7 8 chr2 206184334 206185808 -44502046 - L1PA5 LINE L1 0 6154 4690 22 35 0 0 chr2 206186600 206186629 -44501225 + AT_rich Low_complexity Low_complexity 1 29 0 283 243 173 54 chr2 206186875 206187060 -44500794 - L2 LINE L2 -25 3288 3082 358 291 119 40 chr2 206187400 206187551 -44500303 + MER102a DNA MER1_type 167 329 -1 979 75 87 0 chr2 206189860 206190021 -44497833 - L1MA3 LINE L1 -8 6297 6123 180 333 0 0 chr2 206190102 206190153 -44497701 - MER5B DNA MER1_type -125 53 3 724 151 43 0 chr2 206191467 206191606 -44496248 + AluSp/q SINE Alu 154 298 -15 240 163 0 0 chr2 206191610 206191653 -44496201 + (TG)n Simple_repeat Simple_repeat 2 44 0 3953 199 92 9 chr2 206191733 206193353 -44494501 - L1MB5 LINE L1 -9 6165 4385 2062 123 0 23 chr2 206193353 206193654 -44494200 - AluSg SINE Alu -16 294 1 3953 199 92 9 chr2 206193654 206193833 -44494021 - L1MB5 LINE L1 -1789 4385 4222 21 36 0 0 chr2 206193865 206193893 -44493961 + AT_rich Low_complexity Low_complexity 1 28 0 233 286 154 46 chr2 206193992 206194167 -44493687 - L1MEd LINE L1 -5506 613 420 663 148 79 2 chr2 206194262 206194490 -44493364 + AluJo SINE Alu 1 300 -12 301 140 89 0 chr2 206194808 206194872 -44492982 + L1M LINE L1 5317 5385 -789 454 297 113 42 chr2 206195025 206195445 -44492409 - L2 LINE L2 -184 3129 2694 509 282 79 56 chr2 206196133 206196385 -44491469 - HERVL LTR ERVL -579 5185 4928 306 235 143 20 chr2 206196420 206196518 -44491336 - HERVL LTR ERVL -2485 3169 3060 254 49 0 49 chr2 206196591 206196632 -44491222 + (TCCCC)n Simple_repeat Simple_repeat 5 43 0 1737 150 6 86 chr2 206196639 206196966 -44490888 - AluJb SINE Alu -11 301 1 379 326 117 8 chr2 206196966 206197205 -44490649 - HERVL LTR ERVL -2763 3001 2737 518 251 162 55 chr2 206197550 206198217 -44489637 + LTR28 LTR ERV1 28 822 -4 1375 239 58 7 chr2 206198496 206198911 -44488943 + L1M4 LINE L1 4888 5323 -823 427 258 72 38 chr2 206198921 206199130 -44488724 + L1M4 LINE L1 4929 5144 -1002 524 215 0 6 chr2 206199203 206199319 -44488535 + L1ME2 LINE L1 6059 6178 0 258 290 0 0 chr2 206199486 206199548 -44488306 + GA-rich Low_complexity Low_complexity 2 63 0 301 278 0 0 chr2 206199788 206199878 -44487976 + HAL1 LINE L1 1579 1668 -839 1240 171 33 15 chr2 206199890 206200164 -44487690 - L1MB7 LINE L1 -3 6181 5903 2360 194 0 0 chr2 206200171 206200598 -44487256 - L1MB7 LINE L1 -349 5835 5409 1959 168 3 12 chr2 206200622 206200962 -44486892 + MLT1A1 LTR MaLR 26 362 -3 574 167 0 0 chr2 206200965 206201061 -44486793 - L1MB7 LINE L1 -759 5415 5320 2512 127 30 36 chr2 206201063 206201537 -44486317 - L1MC1 LINE L1 -5 6608 6138 728 167 8 0 chr2 206201538 206201658 -44486196 - AluSc SINE Alu -56 253 133 1741 161 24 3 chr2 206201664 206201962 -44485892 - AluSx SINE Alu -4 308 5 2956 135 51 24 chr2 206201963 206202175 -44485679 - L1MC1 LINE L1 -513 6100 5895 1673 179 30 85 chr2 206202175 206202611 -44485243 - MLT2D LTR ERVL -2 412 1 2956 135 51 24 chr2 206202611 206202946 -44484908 - L1MC1 LINE L1 -718 5895 5538 4503 128 19 50 chr2 206202956 206203475 -44484379 - Tigger3b DNA MER2_type -2215 813 328 2465 62 0 10 chr2 206203475 206203779 -44484075 + AluY SINE Alu 1 301 -10 4503 128 19 50 chr2 206203779 206204098 -44483756 - Tigger3b DNA MER2_type -2700 328 1 6308 212 38 54 chr2 206204098 206204592 -44483262 - L1MC1 LINE L1 -1982 4444 3944 2399 68 0 7 chr2 206204592 206204900 -44482954 - AluY SINE Alu -5 306 1 6308 212 38 54 chr2 206204900 206205443 -44482411 - L1MC1 LINE L1 -2482 3944 3394 402 165 33 0 chr2 206205443 206205534 -44482320 - L1MB4 LINE L1 -1 6179 6086 6308 212 38 54 chr2 206205534 206206593 -44481261 - L1MC1 LINE L1 -3032 3394 2385 723 83 10 0 chr2 206206593 206206689 -44481165 - L1PB2 LINE L1 -2 6149 6053 6308 212 38 54 chr2 206206689 206206765 -44481089 - L1MC1 LINE L1 -4041 2385 2309 2095 128 7 0 chr2 206207691 206207988 -44479866 - AluSx SINE Alu -13 299 1 2163 106 17 3 chr2 206208432 206208725 -44479129 - AluSq SINE Alu -16 297 1 42 0 0 0 chr2 206208727 206208769 -44479085 + AT_rich Low_complexity Low_complexity 1 42 0 208 332 116 71 chr2 206210186 206210496 -44477358 - L2 LINE L2 0 3272 2949 1714 133 49 14 chr2 206212435 206212721 -44475133 + AluSq SINE Alu 2 297 -16 15411 35 2 0 chr2 206213046 206214884 -44472970 - L1P LINE L1 -3433 2713 873 249 267 69 0 chr2 206215264 206215365 -44472489 - L1ME4a LINE L1 -21 6100 5993 1412 186 43 29 chr2 206215370 206215491 -44472363 - AluJb SINE Alu 0 310 192 3557 153 15 93 chr2 206215491 206216069 -44471785 + LTR8 LTR ERV1 1 508 -183 2112 125 0 0 chr2 206216069 206216364 -44471490 + AluY SINE Alu 7 301 -10 3557 153 15 93 chr2 206216364 206216535 -44471319 + LTR8 LTR ERV1 508 691 0 1412 186 43 29 chr2 206216535 206216719 -44471135 - AluJb SINE Alu -118 192 1 32 43 0 0 chr2 206216751 206216797 -44471057 + AT_rich Low_complexity Low_complexity 1 46 0 15466 179 50 9 chr2 206217213 206220776 -44467078 + L1M2 LINE L1 2 3713 -3135 316 122 0 0 chr2 206220915 206220964 -44466890 - L1MC1 LINE L1 -406 5927 5879 2234 108 0 10 chr2 206221841 206222136 -44465718 + AluSq SINE Alu 3 294 -19 865 261 0 3 chr2 206222260 206222518 -44465336 - MER58B DNA MER1_type 0 341 5 830 217 78 42 chr2 206222867 206223283 -44464571 - LTR10B LTR ERV1 -54 493 17 466 239 251 49 chr2 206223548 206223795 -44464059 + LTR21A LTR ERV1 1 297 -208 905 121 0 0 chr2 206226976 206227092 -44460762 + AluSq/x SINE Alu 1 116 -196 24 53 0 0 chr2 206227286 206227324 -44460530 + AT_rich Low_complexity Low_complexity 1 38 0 281 93 19 0 chr2 206227532 206227586 -44460268 + (TTTTG)n Simple_repeat Simple_repeat 3 57 0 2176 136 21 64 chr2 206228782 206229217 -44458637 - L1MB8 LINE L1 -6 6172 5757 917 154 103 13 chr2 206229602 206229836 -44458018 + LTR54B LTR ERV1 242 496 -2 2120 183 8 11 chr2 206229836 206230214 -44457640 + L1MC1 LINE L1 5934 6310 -23 301 349 104 21 chr2 206231682 206231923 -44455931 - MIR SINE MIR 0 262 2 358 290 174 7 chr2 206232004 206232142 -44455712 - MIR SINE MIR -90 172 12 11828 122 47 37 chr2 206232634 206233413 -44454441 + L1PB1 LINE L1 3 773 -6090 2545 65 0 0 chr2 206233413 206233721 -44454133 - AluY SINE Alu -3 308 1 11828 122 47 37 chr2 206233721 206234942 -44452912 + L1PB1 LINE L1 773 2023 -4840 9110 183 27 8 chr2 206234938 206237827 -44450027 + L1PB1 LINE L1 3895 6837 -30 * 27398 75 9 5 chr2 206237827 206241288 -44446566 - HERVL-A2 LTR ERVL -416 5238 1762 11267 71 6 14 chr2 206241282 206242622 -44445232 - HERVL-A2 LTR ERVL -4206 1448 118 * 2368 90 0 0 chr2 206242622 206242932 -44444922 + AluY SINE Alu 1 310 -1 11267 71 6 14 chr2 206242932 206243050 -44444804 - HERVL-A2 LTR ERVL -5536 118 1 3580 98 11 0 chr2 206243050 206243498 -44444356 - MLT2A2 LTR ERVL 0 453 1 647 298 19 19 chr2 206244073 206244288 -44443566 + MIR SINE MIR 44 258 -4 288 239 0 0 chr2 206244997 206245064 -44442790 - L1MC4 LINE L1 0 8042 7976 298 188 356 47 chr2 206245074 206245223 -44442631 - L1MC4 LINE L1 -299 7743 7549 1239 275 131 16 chr2 206245246 206245490 -44442364 - L1MC4 LINE L1 -1091 6951 6736 207 0 0 0 chr2 206245490 206245513 -44442341 + (TG)n Simple_repeat Simple_repeat 2 24 0 1239 275 131 16 chr2 206245513 206245712 -44442142 - L1MC4 LINE L1 -1306 6736 6457 1308 327 107 41 chr2 206245783 206247177 -44440677 + L2 LINE L2 1780 3268 -4 261 57 0 0 chr2 206247595 206247630 -44440224 + (CA)n Simple_repeat Simple_repeat 1 35 0 333 0 0 0 chr2 206247686 206247723 -44440131 + (CA)n Simple_repeat Simple_repeat 2 38 0 607 278 23 19 chr2 206248080 206248296 -44439558 + HAL1 LINE L1 2285 2501 -6 2300 102 3 0 chr2 206248373 206248666 -44439188 + AluSx SINE Alu 1 294 -18 300 111 0 0 chr2 206248666 206248711 -44439143 + (TA)n Simple_repeat Simple_repeat 2 46 0 24 67 0 0 chr2 206248820 206248865 -44438989 + AT_rich Low_complexity Low_complexity 1 45 0 31 44 0 0 chr2 206250073 206250118 -44437736 + AT_rich Low_complexity Low_complexity 1 45 0 548 288 100 85 chr2 206250565 206250804 -44437050 - L2 LINE L2 -4 3268 3034 1771 161 30 10 chr2 206250804 206251109 -44436745 - AluJo SINE Alu -1 311 1 548 288 100 85 chr2 206251109 206251441 -44436413 - L2 LINE L2 -238 3034 2690 979 187 79 51 chr2 206252537 206252614 -44435240 + MER58A DNA MER1_type 5 78 -2342 1285 218 140 36 chr2 206252614 206252949 -44434905 + MLT1A2 LTR MaLR 1 370 -4 979 187 79 51 chr2 206252949 206253085 -44434769 + MER58A DNA MER1_type 78 224 0 452 342 16 21 chr2 206253087 206253280 -44434574 - L3 LINE CR1 -81 1496 1305 205 239 275 7 chr2 206254866 206255008 -44432846 - MIR3 SINE MIR -7 201 22 1707 186 7 0 chr2 206255246 206255542 -44432312 + AluJo SINE Alu 1 298 -14 7952 25 2 1 chr2 206256656 206258340 -44429514 - L1PA3 LINE L1 0 6155 4471 2383 91 3 0 chr2 206258436 206258745 -44429109 + AluY SINE Alu 1 310 -1 431 309 58 10 chr2 206258792 206259103 -44428751 - L1ME4a LINE L1 -277 5844 5519 804 118 8 0 chr2 206259262 206259381 -44428473 - AluSx SINE Alu -5 307 188 653 148 0 0 chr2 206259381 206259482 -44428372 - AluSx SINE Alu -205 108 8 494 258 120 21 chr2 206259918 206260201 -44427653 - L1ME4a LINE L1 -28 6093 5783 22 35 0 0 chr2 206260225 206260254 -44427600 + AT_rich Low_complexity Low_complexity 1 29 0 184 302 32 0 chr2 206262001 206262064 -44425790 + L2 LINE L2 2345 2409 -905 597 196 19 113 chr2 206262216 206262360 -44425494 - L1MC5 LINE L1 -52 7909 7800 1962 162 0 0 chr2 206262360 206262656 -44425198 - AluJo SINE Alu -15 297 2 597 196 19 113 chr2 206262656 206262777 -44425077 - L1MC5 LINE L1 -161 7800 7669 23 33 0 0 chr2 206262947 206262977 -44424877 + AT_rich Low_complexity Low_complexity 1 30 0 437 330 115 5 chr2 206263493 206263684 -44424170 - MIR SINE MIR -10 252 41 2383 83 0 3 chr2 206264359 206264659 -44423195 - AluSq SINE Alu -14 299 1 600 267 51 36 chr2 206264663 206264858 -44422996 - MIR SINE MIR -55 207 10 233 264 142 24 chr2 206264927 206265139 -44422715 + L1MEd LINE L1 895 1131 -4988 1187 146 199 0 chr2 206265194 206265481 -44422373 - Tigger7 DNA MER2_type -1 2586 2243 651 167 23 2 chr2 206265479 206265699 -44422155 + Tigger7 DNA MER2_type 76 346 -204 * 274 311 0 0 chr2 206265699 206265773 -44422081 - Tigger7 DNA MER2_type -656 77 4 1864 184 5 16 chr2 206265773 206265887 -44421967 + MER47A DNA MER2_type 1 115 -2208 1800 162 29 19 chr2 206265887 206266196 -44421658 - AluJo SINE Alu 0 312 1 1864 184 5 16 chr2 206266196 206266451 -44421403 + MER47A DNA MER2_type 115 366 0 316 227 45 0 chr2 206266499 206266587 -44421267 + LTR41 LTR ERVL 91 182 -591 509 249 23 6 chr2 206266909 206267086 -44420768 + L1MD3 LINE L1 7815 7994 -1 1639 159 10 42 chr2 206267267 206267556 -44420298 + AluJb SINE Alu 1 280 -32 287 246 49 16 chr2 206267575 206267697 -44420157 + L1MEd LINE L1 2130 2255 -3874 187 250 0 36 chr2 206267700 206267756 -44420098 + L2 LINE L2 3205 3258 -55 1243 198 195 2 chr2 206267759 206268169 -44419685 + Charlie5 DNA MER1_type 1 489 -2123 1740 129 82 4 chr2 206268169 206268448 -44419406 + AluSx SINE Alu 1 301 -11 1762 152 0 52 chr2 206268956 206269284 -44418570 + AluYa5 SINE Alu 1 311 0 1647 191 24 13 chr2 206269291 206269674 -44418180 + L1PA16 LINE L1 4659 5045 -1101 775 142 8 16 chr2 206269674 206269801 -44418053 + FLAM_C SINE Alu 1 126 -17 5129 143 14 24 chr2 206269804 206270558 -44417296 + L1PA16 LINE L1 5039 5778 -388 1855 156 0 26 chr2 206270558 206270860 -44416994 + AluJb SINE Alu 1 294 -18 5129 143 14 24 chr2 206270860 206271228 -44416626 + L1PA16 LINE L1 5778 6148 -18 4359 194 51 6 chr2 206271347 206272683 -44415171 + L1MA6 LINE L1 4903 6295 -5 1818 164 3 33 chr2 206272994 206273298 -44414556 - AluJb SINE Alu -17 295 1 25 0 0 68 chr2 206273488 206273532 -44414322 + AT_rich Low_complexity Low_complexity 1 41 0 2383 82 20 0 chr2 206274089 206274395 -44413459 + AluSq SINE Alu 1 312 -1 1656 167 82 50 chr2 206275123 206275500 -44412354 - MLT1B LTR MaLR 0 390 2 576 219 184 140 chr2 206275534 206275961 -44411893 + MLT1F1 LTR MaLR 52 505 -62 1622 73 23 0 chr2 206275961 206276181 -44411673 - L1PA13 LINE L1 0 6163 5939 576 219 184 140 chr2 206276181 206276247 -44411607 + MLT1F1 LTR MaLR 505 567 0 2220 107 3 0 chr2 206276496 206276786 -44411068 + AluSx SINE Alu 1 291 -21 317 323 257 3 chr2 206277364 206277702 -44410152 + L2 LINE L2 2111 2534 -780 797 217 0 42 chr2 206277732 206277898 -44409956 + FAM SINE Alu 1 159 -16 295 261 59 8 chr2 206278170 206278289 -44409565 + MER114 LTR ERV 20 144 -504 649 230 112 40 chr2 206278343 206278639 -44409215 + MER114 LTR ERV 331 647 -1 648 206 53 15 chr2 206278801 206278932 -44408922 - FAM SINE Alu -45 140 5 579 144 21 0 chr2 206279218 206279315 -44408539 - BC200 scRNA scRNA -63 137 39 1817 149 38 0 chr2 206279400 206279689 -44408165 - AluSx SINE Alu -12 300 1 1441 174 57 18 chr2 206279728 206280009 -44407845 - AluJo SINE Alu -9 303 12 1355 69 173 10 chr2 206280469 206280671 -44407183 + AluY SINE Alu 60 294 -17 21 0 0 0 chr2 206280698 206280719 -44407135 + AT_rich Low_complexity Low_complexity 1 21 0 1007 213 99 11 chr2 206281229 206281492 -44406362 - AluJb SINE Alu -16 286 1 519 176 0 0 chr2 206281805 206281896 -44405958 - FLAM SINE Alu -10 133 43 468 141 0 0 chr2 206281902 206281973 -44405881 - FLAM_C SINE Alu -36 107 37 412 278 92 35 chr2 206282383 206282556 -44405298 + MIR SINE MIR 3 185 -77 247 351 45 0 chr2 206284141 206284252 -44403602 + MIR SINE MIR 147 262 0 229 219 123 0 chr2 206284330 206284403 -44403451 + MIR SINE MIR 48 129 -133 403 237 135 39 chr2 206284781 206284867 -44402987 - MIR3 SINE MIR -16 192 116 2223 95 16 10 chr2 206284867 206285172 -44402682 + AluSx SINE Alu 1 307 -5 403 237 135 39 chr2 206285172 206285241 -44402613 - MIR3 SINE MIR -92 116 22 313 208 0 109 chr2 206286510 206286611 -44401243 - L1MC4 LINE L1 -1339 6703 6614 215 71 102 20 chr2 206286637 206286735 -44401119 + (TATAA)n Simple_repeat Simple_repeat 4 109 0 2527 194 15 47 chr2 206286759 206287372 -44400482 + L1MCa LINE L1 12 604 -5822 1875 135 14 10 chr2 206287645 206287941 -44399913 + AluSp SINE Alu 1 297 -16 1157 335 112 25 chr2 206288766 206289043 -44398811 - L2 LINE L2 -9 3263 3012 1410 164 119 4 chr2 206289043 206289311 -44398543 - AluJb SINE Alu -13 299 1 1157 335 112 25 chr2 206289311 206290172 -44397682 - L2 LINE L2 -260 3012 2025 3612 118 74 32 chr2 206290302 206291174 -44396680 - MER11A LTR ERVK 0 1266 219 2247 104 0 0 chr2 206291777 206292074 -44395780 + AluSx SINE Alu 7 303 -9 1303 81 0 0 chr2 206292074 206292235 -44395619 + AluSg/x SINE Alu 134 294 -18 2001 122 0 0 chr2 206292672 206292978 -44394876 + AluSx SINE Alu 13 318 0 2972 116 17 77 chr2 206292986 206293364 -44394490 + L1MB2 LINE L1 5591 5923 -248 2046 159 0 6 chr2 206293364 206293678 -44394176 + AluJb SINE Alu 1 312 0 2972 116 17 77 chr2 206293678 206293887 -44393967 + L1MB2 LINE L1 5923 6143 -28 394 262 117 21 chr2 206295213 206295358 -44392496 - MIR SINE MIR -12 250 92 862 129 0 0 chr2 206295893 206296017 -44391837 + AluSq/x SINE Alu 1 124 -189 1200 141 73 0 chr2 206296022 206296270 -44391584 + L1MCa LINE L1 977 1242 -5184 2442 131 14 52 chr2 206296270 206296901 -44390953 - MER4B LTR ERV1 0 779 1 2118 141 53 13 chr2 206296902 206297491 -44390363 + L1MCa LINE L1 1240 1939 -4487 812 190 0 0 chr2 206297496 206297633 -44390221 + FLAM_C SINE Alu 6 142 -1 681 188 267 0 chr2 206297654 206297856 -44389998 + L1MCa LINE L1 1927 2182 -4244 2050 128 14 0 chr2 206297858 206298154 -44389700 + AluSq SINE Alu 2 301 -12 219 69 0 0 chr2 206298187 206298216 -44389638 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 1768 163 20 24 chr2 206298227 206298521 -44389333 + AluJb SINE Alu 1 293 -19 27 0 0 0 chr2 206298521 206298548 -44389306 + AT_rich Low_complexity Low_complexity 1 27 0 480 194 0 0 chr2 206298555 206298658 -44389196 + L1 LINE L1 4553 4655 -1491 2310 99 3 0 chr2 206298659 206298952 -44388902 + AluSp SINE Alu 1 294 -19 1455 171 19 4 chr2 206298955 206299212 -44388642 + AluSx SINE Alu 1 261 -51 1989 133 7 14 chr2 206299344 206299638 -44388216 + AluSg SINE Alu 1 292 -18 295 280 129 11 chr2 206300162 206300255 -44387599 + MIR SINE MIR 47 150 -112 568 170 0 10 chr2 206400418 206400518 -44287336 + MLT1A1 LTR MaLR 267 365 0 2576 207 32 58 chr2 206400521 206400613 -44287241 - L1M4c LINE L1 -4676 1708 1615 2535 61 3 13 chr2 206400613 206400923 -44286931 - AluY SINE Alu -4 307 1 2576 207 32 58 chr2 206400923 206401493 -44286361 - L1M4c LINE L1 -4769 1615 1070 2246 117 13 0 chr2 206401493 206401792 -44286062 - AluSq SINE Alu -10 303 1 2576 207 32 58 chr2 206401792 206401951 -44285903 - L1M4c LINE L1 -5314 1070 908 305 322 35 9 chr2 206401981 206402096 -44285758 - ERVL LTR ERVL -5295 469 352 1542 239 207 19 chr2 206402444 206402678 -44285176 - LTR50 LTR ERVL -111 684 495 2377 82 0 0 chr2 206402678 206402971 -44284883 - AluSc SINE Alu -16 293 1 1542 239 207 19 chr2 206402971 206403305 -44284549 - LTR50 LTR ERVL -300 495 9 232 167 0 0 chr2 206403374 206403422 -44284432 - HAL1 LINE L1 -133 2374 2327 369 222 52 63 chr2 206403479 206403638 -44284216 - MLT1J LTR MaLR -92 419 227 2214 116 0 0 chr2 206403638 206403932 -44283922 - AluSc SINE Alu -15 294 1 369 222 52 63 chr2 206403932 206403959 -44283895 - MLT1J LTR MaLR -284 227 201 2130 92 67 0 chr2 206403979 206404261 -44283593 - AluSx SINE Alu -11 301 1 1184 161 173 12 chr2 206404261 206404510 -44283344 - AluJo SINE Alu -12 290 2 43 0 0 19 chr2 206404510 206404537 -44283317 + AT_rich Low_complexity Low_complexity 1 27 -26 2559 48 3 0 chr2 206404537 206404829 -44283025 - AluSp SINE Alu -20 293 1 43 0 0 19 chr2 206404829 206404855 -44282999 + AT_rich Low_complexity Low_complexity 27 53 0 1565 53 19 14 chr2 206404855 206405062 -44282792 - L1PA5 LINE L1 -6 6148 5941 925 28 0 9 chr2 206405062 206405170 -44282684 - U6 snRNA snRNA 0 107 1 2386 56 7 30 chr2 206405172 206405476 -44282378 - AluY SINE Alu -14 297 1 391 293 139 54 chr2 206405478 206405737 -44282117 - HAL1 LINE L1 -1970 537 257 1489 57 0 17 chr2 206406125 206406302 -44281552 + AluSp SINE Alu 1 174 -139 966 201 6 0 chr2 206406371 206406540 -44281314 - FAM SINE Alu -5 170 1 280 238 62 12 chr2 206406565 206406645 -44281209 - MIR SINE MIR -109 153 70 557 185 161 8 chr2 206407126 206407256 -44280598 + FRAM SINE Alu 14 163 -13 1367 70 48 5 chr2 206408580 206408766 -44279088 + AluY SINE Alu 118 311 0 315 0 0 0 chr2 206408771 206408806 -44279048 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 448 182 212 53 chr2 206409768 206409821 -44278033 + MER106B DNA MER1_type 1 44 -1015 2081 121 24 0 chr2 206409821 206410111 -44277743 + AluSg SINE Alu 1 297 -13 448 182 212 53 chr2 206410111 206410207 -44277647 + MER106B DNA MER1_type 44 123 -936 2506 57 3 3 chr2 206410207 206410506 -44277348 + AluY SINE Alu 1 299 -12 448 182 212 53 chr2 206410506 206410554 -44277300 + MER106B DNA MER1_type 123 1055 -4 270 0 0 0 chr2 206412419 206412449 -44275405 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1733 168 7 0 chr2 206413104 206413390 -44274464 - AluSx SINE Alu -24 288 1 740 164 29 79 chr2 206413484 206413624 -44274230 + FLAM_C SINE Alu 1 133 0 1807 154 3 17 chr2 206414483 206414781 -44273073 - AluJo SINE Alu -18 294 1 1870 121 96 0 chr2 206415343 206415623 -44272231 + AluSx SINE Alu 1 307 -5 1638 145 28 17 chr2 206415779 206416069 -44271785 - AluJo SINE Alu -19 293 1 287 286 119 24 chr2 206417368 206417494 -44270360 + MIR SINE MIR 59 196 -66 644 286 117 10 chr2 206418157 206418363 -44269491 + MIR SINE MIR 17 244 -18 1972 119 14 3 chr2 206418391 206418676 -44269178 + AluSx SINE Alu 1 288 -24 336 258 188 0 chr2 206420275 206420403 -44267451 - MIR SINE MIR -11 251 100 696 289 35 18 chr2 206420410 206420638 -44267216 + MIR SINE MIR 1 232 -30 498 215 65 0 chr2 206420726 206420833 -44267021 - MER81 DNA DNA 0 114 1 26 0 0 0 chr2 206421625 206421651 -44266203 + AT_rich Low_complexity Low_complexity 1 26 0 205 238 0 0 chr2 206422782 206422824 -44265030 + (CGG)n Simple_repeat Simple_repeat 1 42 0 369 284 103 62 chr2 206422845 206423165 -44264689 + L1M2 LINE L1 743 1075 -5774 291 254 47 72 chr2 206423895 206424088 -44263766 + MER5A DNA MER1_type 1 188 -1 252 227 67 42 chr2 206424709 206424828 -44263026 - L2 LINE L2 -309 2963 2842 918 212 69 14 chr2 206425000 206425217 -44262637 - MIR SINE MIR 0 262 34 183 67 0 0 chr2 206425251 206425281 -44262573 - L2 LINE L2 0 3313 3284 441 172 0 0 chr2 206425702 206425766 -44262088 - AluJ/FLAM SINE Alu -228 84 21 825 204 11 28 chr2 206426057 206426233 -44261621 - AluJo SINE Alu -139 173 1 207 139 0 0 chr2 206426637 206426673 -44261181 + (TATG)n Simple_repeat Simple_repeat 1 36 0 28 29 0 0 chr2 206426830 206426865 -44260989 + AT_rich Low_complexity Low_complexity 1 35 0 828 164 0 22 chr2 206426972 206427106 -44260748 - FLAM_C SINE Alu 0 133 3 2617 34 10 0 chr2 206427510 206427807 -44260047 + AluY SINE Alu 1 300 -11 2490 70 0 0 chr2 206427958 206428259 -44259595 - AluSx SINE Alu -11 301 1 2410 139 55 38 chr2 206428924 206428968 -44258886 - MSTB LTR MaLR -1 425 383 2143 132 0 0 chr2 206428968 206429272 -44258582 + AluY SINE Alu 6 309 -2 2410 139 55 38 chr2 206429272 206429645 -44258209 - MSTB LTR MaLR -43 383 1 202 139 23 23 chr2 206430123 206430166 -44257688 + (TG)n Simple_repeat Simple_repeat 2 44 0 1807 167 3 3 chr2 206431032 206431320 -44256534 + AluJo SINE Alu 1 288 -24 297 0 0 0 chr2 206431523 206431556 -44256298 + (TG)n Simple_repeat Simple_repeat 2 34 0 3651 145 28 52 chr2 206431885 206432438 -44255416 - L1MB3 LINE L1 -1 6182 5650 2234 130 0 16 chr2 206432438 206432753 -44255101 + AluSg SINE Alu 1 310 0 3651 145 28 52 chr2 206432753 206432923 -44254931 - L1MB3 LINE L1 -533 5650 5477 5889 98 16 8 chr2 206432935 206433350 -44254504 - L1PA14 LINE L1 -3 6158 5748 2257 127 140 11 chr2 206433350 206433729 -44254125 - MSTA LTR MaLR 0 428 1 5889 98 16 8 chr2 206433729 206434163 -44253691 - L1PA14 LINE L1 -413 5748 5302 1102 134 0 0 chr2 206434380 206434529 -44253325 + L1PB3 LINE L1 5991 6139 -15 540 180 117 150 chr2 206434542 206434814 -44253040 - LTR37B LTR ERV1 -33 435 174 2069 188 96 65 chr2 206434814 206435107 -44252747 - MLT1D LTR MaLR 0 505 190 2429 75 0 0 chr2 206435107 206435401 -44252453 - AluY SINE Alu -17 294 1 2069 188 96 65 chr2 206435401 206435597 -44252257 - MLT1D LTR MaLR -315 190 1 540 180 117 150 chr2 206435597 206435657 -44252197 - LTR37B LTR ERV1 -294 174 114 844 163 46 41 chr2 206435669 206435865 -44251989 + MER3 DNA MER1_type 13 209 0 412 298 39 34 chr2 206435704 206435912 -44251942 - MER3 DNA MER1_type 0 209 1 * 1445 181 0 0 chr2 206435941 206436184 -44251670 + AluJo SINE Alu 54 296 -16 1547 174 152 48 chr2 206436667 206436814 -44251040 + MLT1C LTR MaLR 6 136 -331 2289 99 3 3 chr2 206436814 206437117 -44250737 - AluSg SINE Alu -7 303 1 1547 174 152 48 chr2 206437117 206437384 -44250470 + MLT1C LTR MaLR 136 463 -4 1872 177 0 90 chr2 206438589 206438904 -44248950 - MLT1A1 LTR MaLR 0 365 92 2818 7 0 0 chr2 206438904 206439207 -44248647 - AluYa5 SINE Alu -8 303 1 1872 177 0 90 chr2 206439207 206439292 -44248562 - MLT1A1 LTR MaLR -273 92 1 206 325 104 0 chr2 206441172 206441249 -44246605 + MIR3 SINE MIR 92 176 -32 27 49 0 0 chr2 206441581 206441622 -44246232 + AT_rich Low_complexity Low_complexity 1 41 0 800 161 0 0 chr2 206441622 206441734 -44246120 - FLAM_C SINE Alu -25 118 7 1813 141 24 37 chr2 206441770 206442068 -44245786 + AluSx SINE Alu 1 294 -18 187 227 91 0 chr2 206442174 206442218 -44245636 - MIR SINE MIR -16 246 199 1675 150 50 25 chr2 206442356 206442636 -44245218 - AluJb SINE Alu -25 287 1 25 51 0 0 chr2 206442862 206442901 -44244953 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr2 206443266 206443291 -44244563 + AT_rich Low_complexity Low_complexity 1 25 0 2121 122 7 0 chr2 206443834 206444129 -44243725 - AluSx SINE Alu -15 297 1 1301 131 5 5 chr2 206444929 206445120 -44242734 - AluJo SINE Alu -10 302 112 228 263 0 0 chr2 206445340 206445416 -44242438 + (TG)n Simple_repeat Simple_repeat 2 77 0 740 159 0 0 chr2 206445577 206445684 -44242170 - AluJo SINE Alu -204 108 2 340 160 0 0 chr2 206445686 206445736 -44242118 + MER77 LTR ERV1 556 605 0 611 225 74 85 chr2 206445751 206445947 -44241907 - MIR SINE MIR -1 261 67 2041 138 0 0 chr2 206445947 206446238 -44241616 + AluSx SINE Alu 1 291 -21 611 225 74 85 chr2 206446238 206446299 -44241555 - MIR SINE MIR -195 67 7 228 263 0 0 chr2 206446728 206446804 -44241050 + (TG)n Simple_repeat Simple_repeat 2 77 0 22 0 0 0 chr2 206447920 206447942 -44239912 + AT_rich Low_complexity Low_complexity 1 22 0 2030 115 29 0 chr2 206448985 206449263 -44238591 + AluSg SINE Alu 6 291 -19 936 279 85 22 chr2 206449672 206450037 -44237817 + L2 LINE L2 2925 3312 -1 202 318 0 0 chr2 206450185 206450229 -44237625 + L2 LINE L2 3136 3179 -93 262 264 120 60 chr2 206450295 206450685 -44237169 - L2 LINE L2 -264 3008 2577 512 233 16 47 chr2 206450685 206450814 -44237040 + L2 LINE L2 3189 3313 0 239 351 47 31 chr2 206450818 206451009 -44236845 - L2 LINE L2 -737 2577 2384 2129 131 0 0 chr2 206451290 206451587 -44236267 + AluSg SINE Alu 1 297 -13 383 208 83 33 chr2 206451985 206452105 -44235749 + L1ME4a LINE L1 5984 6109 -12 627 252 129 10 chr2 206453170 206453368 -44234486 + MIR SINE MIR 20 234 -28 2272 89 7 3 chr2 206453819 206454123 -44233731 - AluSc SINE Alu -4 305 1 445 292 42 0 chr2 206454559 206454679 -44233175 + L2 LINE L2 3142 3266 -6 2296 116 0 6 chr2 206454727 206455038 -44232816 + AluSc SINE Alu 1 309 0 198 103 0 0 chr2 206455106 206455135 -44232719 + (TATG)n Simple_repeat Simple_repeat 1 29 0 334 284 115 79 chr2 206455253 206455301 -44232553 + MIR SINE MIR 3 48 -214 581 272 115 84 chr2 206455301 206455624 -44232230 - MER102b DNA MER1_type -4 337 5 334 284 115 79 chr2 206455624 206455808 -44232046 + MIR SINE MIR 48 242 -20 613 191 11 0 chr2 206456220 206456314 -44231540 - FLAM_A SINE Alu -46 96 2 278 155 0 86 chr2 206456506 206456564 -44231290 - MER20 DNA MER1_type -21 198 146 288 266 70 23 chr2 206456630 206456758 -44231096 - MIR3 SINE MIR -74 134 1 198 246 98 0 chr2 206457771 206457832 -44230022 - MIR SINE MIR -61 201 135 1084 161 6 30 chr2 206459425 206459593 -44228261 - U1 snRNA snRNA 0 165 2 189 0 0 0 chr2 206460073 206460094 -44227760 + (TG)n Simple_repeat Simple_repeat 2 22 0 336 267 40 0 chr2 206460469 206460555 -44227299 - MIR3 SINE MIR -9 199 107 3777 113 25 77 chr2 206460555 206461190 -44226664 + LTR43 LTR ERV1 1 602 0 336 267 40 0 chr2 206461190 206461204 -44226650 - MIR3 SINE MIR -101 107 95 231 36 0 0 chr2 206461749 206461777 -44226077 + (TG)n Simple_repeat Simple_repeat 1 28 0 1731 181 3 0 chr2 206462466 206462769 -44225085 - AluJb SINE Alu -8 304 1 2003 97 38 3 chr2 206462808 206463096 -44224758 - AluSc SINE Alu -11 298 1 888 232 173 56 chr2 206463958 206464316 -44223538 + MLT1J1 LTR MaLR 6 405 -41 339 150 0 0 chr2 206464939 206464999 -44222855 + (GA)n Simple_repeat Simple_repeat 2 61 0 26 30 0 0 chr2 206465175 206465208 -44222646 + AT_rich Low_complexity Low_complexity 1 33 0 875 142 0 0 chr2 206465208 206465328 -44222526 - FLAM_A SINE Alu -13 120 1 221 204 20 0 chr2 206465393 206465442 -44222412 + A-rich Low_complexity Low_complexity 4 53 0 513 333 109 22 chr2 206465611 206465977 -44221877 - MLT1K LTR MaLR -64 524 127 195 374 101 0 chr2 206467061 206467160 -44220694 - L2 LINE L2 -28 3244 3136 918 206 97 114 chr2 206467701 206468061 -44219793 + MLT1C LTR MaLR 21 451 -16 2068 104 0 23 chr2 206468177 206468476 -44219378 + AluSq SINE Alu 9 300 -13 2394 218 109 24 chr2 206468965 206469661 -44218193 + MER21B LTR ERV1 1 755 -108 480 294 51 46 chr2 206469927 206470124 -44217730 - MIR SINE MIR -32 230 33 909 150 0 0 chr2 206471110 206471243 -44216611 + FLAM_C SINE Alu 1 133 0 268 294 163 0 chr2 206471452 206471544 -44216310 - MIR SINE MIR -64 198 92 * 330 269 113 57 chr2 206471534 206471675 -44216179 + L2 LINE L2 2933 3081 -191 812 308 53 15 chr2 206472055 206472393 -44215461 + L1MC4a LINE L1 5576 5926 -1882 338 256 37 115 chr2 206474254 206474387 -44213467 - L1MCa LINE L1 -4361 2065 1950 1997 127 0 3 chr2 206474387 206474679 -44213175 - AluSx SINE Alu -21 291 1 338 256 37 115 chr2 206474679 206474736 -44213118 - L1MCa LINE L1 -4476 1950 1890 411 21 0 0 chr2 206475758 206475806 -44212048 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 1770 148 0 3 chr2 206475809 206476093 -44211761 - AluJo SINE Alu -29 283 1 265 269 29 6 chr2 206476243 206476414 -44211440 + (TCCA)n Simple_repeat Simple_repeat 2 176 0 386 324 92 6 chr2 206476803 206476976 -44210878 - MER5A DNA MER1_type 0 189 2 189 275 56 92 chr2 206477035 206477102 -44210752 - MER5A DNA MER1_type -51 138 70 1733 138 3 46 chr2 206477102 206477407 -44210447 - AluJb SINE Alu -20 292 1 189 275 56 92 chr2 206477407 206477481 -44210373 - MER5A DNA MER1_type -119 70 2 555 204 211 0 chr2 206477525 206477667 -44210187 - MER5B DNA MER1_type 0 178 7 239 227 109 67 chr2 206478315 206478434 -44209420 - MIR SINE MIR -72 190 67 2177 95 3 0 chr2 206479622 206479917 -44207937 - AluSx SINE Alu -16 296 1 339 25 0 0 chr2 206480103 206480143 -44207711 + (CA)n Simple_repeat Simple_repeat 1 40 0 366 118 176 0 chr2 206480939 206481007 -44206847 - MADE1 DNA Mariner 0 80 1 544 265 122 20 chr2 206481286 206481482 -44206372 - MIR SINE MIR -6 256 41 2030 129 3 0 chr2 206481656 206481951 -44205903 - AluSx SINE Alu -16 296 1 1367 224 8 0 chr2 206481975 206482230 -44205624 - MIR SINE MIR -4 258 2 1292 242 49 56 chr2 206482936 206483362 -44204492 + MLT1J LTR MaLR 25 447 -64 33 35 0 17 chr2 206483806 206483826 -44204028 + AT_rich Low_complexity Low_complexity 1 20 -37 2116 111 0 0 chr2 206483826 206484114 -44203740 - AluSx SINE Alu -24 288 1 33 35 0 17 chr2 206484114 206484151 -44203703 + AT_rich Low_complexity Low_complexity 20 57 0 1630 154 3 23 chr2 206484746 206485045 -44202809 + AluJo SINE Alu 3 295 -17 2131 124 0 0 chr2 206485443 206485741 -44202113 - AluSx SINE Alu -14 298 1 315 71 0 0 chr2 206486672 206486714 -44201140 + (TG)n Simple_repeat Simple_repeat 1 42 0 315 71 0 0 chr2 206487842 206487884 -44199970 + (GA)n Simple_repeat Simple_repeat 1 42 0 1595 168 28 0 chr2 206487988 206488273 -44199581 - AluJb SINE Alu -17 295 3 620 228 141 32 chr2 206488304 206488554 -44199300 + L1ME1 LINE L1 5905 6183 -1 1789 191 98 36 chr2 206488813 206489253 -44198601 + MLT1C LTR MaLR 1 467 0 1719 162 3 7 chr2 206489719 206490021 -44197833 + AluSx SINE Alu 1 301 -11 1553 172 0 56 chr2 206490162 206490464 -44197390 - AluJo SINE Alu -15 297 13 378 0 0 0 chr2 206492163 206492205 -44195649 + (TG)n Simple_repeat Simple_repeat 2 43 0 643 229 29 0 chr2 206494679 206494819 -44193035 - MIR SINE MIR -83 179 36 180 256 223 54 chr2 206495187 206495429 -44192425 - L3 LINE CR1 -162 1415 1133 487 286 135 52 chr2 206495640 206495874 -44191980 - L3 LINE CR1 -473 1104 830 2150 123 3 0 chr2 206495874 206496183 -44191671 - AluSx SINE Alu -2 310 1 487 286 135 52 chr2 206496183 206496297 -44191557 - L3 LINE CR1 -747 830 727 339 245 123 31 chr2 206496603 206496701 -44191153 + MER5B DNA MER1_type 1 89 -89 2046 110 10 23 chr2 206496701 206496869 -44190985 - AluSq SINE Alu -9 304 140 2242 72 3 3 chr2 206496869 206497159 -44190695 - AluSp SINE Alu -17 296 7 2046 110 10 23 chr2 206497159 206497298 -44190556 - AluSq SINE Alu -173 140 1 339 245 123 31 chr2 206497298 206497362 -44190492 + MER5B DNA MER1_type 89 178 0 183 283 17 33 chr2 206497364 206497424 -44190430 - MIR3 SINE MIR -50 158 100 216 0 0 0 chr2 206498520 206498544 -44189310 + (T)n Simple_repeat Simple_repeat 1 24 0 2395 78 0 0 chr2 206499449 206499757 -44188097 + AluSc SINE Alu 1 308 -1 1133 235 107 14 chr2 206499759 206500429 -44187425 + L1MD3 LINE L1 7239 7994 -1 227 297 143 0 chr2 206500444 206500535 -44187319 + L3b LINE CR1 1212 1315 -268 1917 113 3 11 chr2 206500740 206501024 -44186830 + AluSx SINE Alu 1 282 -30 228 35 0 0 chr2 206501028 206501057 -44186797 + (CAA)n Simple_repeat Simple_repeat 2 30 0 26 64 0 0 chr2 206502512 206502559 -44185295 + AT_rich Low_complexity Low_complexity 1 47 0 433 208 99 0 chr2 206503795 206503896 -44183958 + MER5A DNA MER1_type 2 112 -77 235 214 221 46 chr2 206503814 206503945 -44183909 - MER5A DNA MER1_type -15 174 21 * 191 346 108 23 chr2 206504539 206504669 -44183185 + MIR SINE MIR 8 148 -114 369 250 112 26 chr2 206504678 206504794 -44183060 - MER94 DNA DNA -3 131 6 3335 151 73 7 chr2 206504826 206504964 -44182890 + MER7C DNA MER2_type 1 128 -2900 1653 181 0 19 chr2 206504964 206505278 -44182576 - AluJb SINE Alu -4 308 1 3335 151 73 7 chr2 206505278 206505702 -44182152 + MER7C DNA MER2_type 128 600 -2 751 264 33 16 chr2 206507348 206507590 -44180264 + MER46C DNA MER2_type 81 326 -12 401 110 14 0 chr2 206508603 206508676 -44179178 + (TGGA)n Simple_repeat Simple_repeat 1 74 0 290 232 42 21 chr2 206508904 206508999 -44178855 - MER5A DNA MER1_type -76 113 17 282 161 151 43 chr2 206509021 206509114 -44178740 - MER112 DNA MER1_type -5 255 153 476 138 0 11 chr2 206509208 206509302 -44178552 + (TC)n Simple_repeat Simple_repeat 1 93 0 201 74 0 0 chr2 206509302 206509329 -44178525 + (TG)n Simple_repeat Simple_repeat 2 28 0 202 279 221 0 chr2 206509898 206509966 -44177888 - L3 LINE CR1 -351 1226 1144 204 167 0 24 chr2 206510122 206510164 -44177690 - L2 LINE L2 -5 3308 3268 195 279 0 0 chr2 206510369 206510412 -44177442 - L2 LINE L2 -222 3050 3008 409 268 49 0 chr2 206512330 206512453 -44175401 + MIR SINE MIR 48 176 -86 16757 152 12 14 chr2 206512650 206516622 -44171232 - L1PA14 LINE L1 0 6161 2197 1512 156 53 39 chr2 206517336 206517618 -44170236 - AluJb SINE Alu -26 286 1 258 350 15 51 chr2 206518296 206518433 -44169421 + MIR3 SINE MIR 29 160 -48 1236 261 119 48 chr2 206519079 206519585 -44168269 + L1ME4a LINE L1 5361 5830 -291 6394 31 0 0 chr2 206519585 206520290 -44167564 + L1PA4 LINE L1 5448 6152 -3 1236 261 119 48 chr2 206520290 206520378 -44167476 + L1ME4a LINE L1 5830 5910 -211 1691 184 50 71 chr2 206520378 206520856 -44166998 + LTR37B LTR ERV1 1 468 0 1236 261 119 48 chr2 206520856 206520966 -44166888 + L1ME4a LINE L1 5910 6116 -5 385 229 39 104 chr2 206522163 206522317 -44165537 - L1MC/D LINE L1 -629 5492 5350 604 305 106 63 chr2 206522489 206523168 -44164686 - L1MC/D LINE L1 -1123 5023 4316 2183 94 0 29 chr2 206523843 206524151 -44163703 - AluSx SINE Alu -13 299 1 1003 239 75 86 chr2 206524154 206524724 -44163130 - L1MC4 LINE L1 0 8042 7479 2298 87 0 7 chr2 206525501 206525799 -44162055 + AluSc SINE Alu 1 296 -13 383 313 4 0 chr2 206525833 206525948 -44161906 + MIR SINE MIR 31 146 -62 779 301 116 15 chr2 206526809 206527145 -44160709 - MARNA DNA Mariner -25 561 192 334 261 0 0 chr2 206527459 206527528 -44160326 + MER21B LTR ERV1 19 87 -776 3680 187 57 27 chr2 206527533 206528310 -44159544 + MER21B LTR ERV1 43 842 -21 246 261 43 0 chr2 206530575 206530667 -44157187 - L1ME4a LINE L1 -4 6117 6022 450 300 63 38 chr2 206530865 206531102 -44156752 + L2 LINE L2 3028 3270 -43 446 237 140 32 chr2 206531326 206531512 -44156342 - L2 LINE L2 -4 3309 3104 24 53 0 0 chr2 206531702 206531740 -44156114 + AT_rich Low_complexity Low_complexity 1 38 0 216 67 0 0 chr2 206532435 206532465 -44155389 + (TG)n Simple_repeat Simple_repeat 2 31 0 451 322 21 0 chr2 206534796 206534955 -44152899 + MIR3 SINE MIR 20 185 -23 236 30 30 0 chr2 206535333 206535366 -44152488 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 308 250 32 40 chr2 206535586 206535710 -44152144 - MIR SINE MIR -68 140 18 2220 186 47 33 chr2 206536174 206536690 -44151164 + Charlie1b DNA MER1_type 1 523 0 223 298 40 106 chr2 206536690 206536841 -44151013 - L2 LINE L2 -52 3220 3080 206 105 26 0 chr2 206536978 206537016 -44150838 + (TTTAA)n Simple_repeat Simple_repeat 1 39 0 1833 160 7 7 chr2 206537016 206537309 -44150545 - AluJb SINE Alu -19 293 1 592 264 202 58 chr2 206537371 206537605 -44150249 + L2 LINE L2 1715 1914 -1400 2162 85 3 30 chr2 206537605 206537900 -44149954 - AluSx SINE Alu -23 289 3 592 264 202 58 chr2 206537900 206538339 -44149515 + L2 LINE L2 1914 2485 -829 337 338 75 26 chr2 206538340 206538568 -44149286 + L2 LINE L2 2602 2840 -474 442 240 78 23 chr2 206538914 206539043 -44148811 + L2 LINE L2 3133 3268 -4 221 258 43 135 chr2 206540320 206540483 -44147371 + MER5B DNA MER1_type 2 149 -29 228 291 181 0 chr2 206540947 206541074 -44146780 + L3 LINE CR1 1239 1388 -189 886 283 77 26 chr2 206541342 206541731 -44146123 + MER115 DNA AcHobo 27 435 -258 976 239 71 57 chr2 206541971 206542495 -44145359 - L1ME4a LINE L1 0 6121 5591 220 275 94 80 chr2 206542579 206542717 -44145137 - MIR SINE MIR -3 259 120 204 231 0 0 chr2 206543366 206543418 -44144436 + (TGG)n Simple_repeat Simple_repeat 2 53 0 1694 174 110 0 chr2 206543712 206543927 -44143927 + MER2 DNA MER2_type 1 262 -82 1753 166 35 0 chr2 206543927 206544210 -44143644 - AluJb SINE Alu -19 293 1 1694 174 110 0 chr2 206544210 206544304 -44143550 + MER2 DNA MER2_type 262 344 0 1992 166 51 0 chr2 206544552 206544883 -44142971 - MER7A DNA MER2_type 0 346 1 1993 204 130 87 chr2 206545100 206545859 -44141995 + MER21B LTR ERV1 21 812 -51 2330 206 50 2 chr2 206546758 206547218 -44140636 + LTR40a LTR ERVL 38 519 0 534 293 31 3 chr2 206547772 206547967 -44139887 + MIR SINE MIR 15 262 0 706 102 17 8 chr2 206548108 206548226 -44139628 + (GGAA)n Simple_repeat Simple_repeat 2 120 0 2685 91 34 13 chr2 206548311 206548697 -44139157 - L1PA13 LINE L1 -3 6160 5767 2020 131 3 10 chr2 206548866 206549163 -44138691 - AluSx SINE Alu -17 295 1 192 402 8 25 chr2 206550211 206550333 -44137521 + L3 LINE CR1 76 195 -1382 6490 21 17 375 chr2 206550361 206552519 -44135335 + SVA Other Other 16 1421 0 201 306 83 16 chr2 206552654 206552775 -44135079 + L3 LINE CR1 366 494 -1083 355 228 54 11 chr2 206552844 206552936 -44134918 + L3 LINE CR1 610 705 -872 2219 117 0 0 chr2 206554274 206554574 -44133280 + AluSx SINE Alu 11 310 -2 1701 182 10 0 chr2 206555015 206555306 -44132548 - AluJo SINE Alu -14 298 5 21 0 0 0 chr2 206556368 206556389 -44131465 + AT_rich Low_complexity Low_complexity 1 21 0 265 277 0 0 chr2 206557144 206557209 -44130645 + MIR SINE MIR 65 129 -133 194 218 0 18 chr2 206557853 206557908 -44129946 + CT-rich Low_complexity Low_complexity 1 54 0 2391 109 0 0 chr2 206558481 206558792 -44129062 - AluSx SINE Alu -1 311 1 207 139 0 0 chr2 206559063 206559099 -44128755 + (CATA)n Simple_repeat Simple_repeat 1 36 0 638 89 0 0 chr2 206559170 206559249 -44128605 + MADE1 DNA Mariner 2 80 0 514 184 163 54 chr2 206559249 206559388 -44128466 + MIR SINE MIR 101 258 -4 542 262 130 18 chr2 206559388 206559830 -44128024 - L1MC/D LINE L1 -327 5794 5282 1381 320 95 39 chr2 206559971 206560822 -44127032 - ERVL LTR ERVL -1090 4674 3776 533 287 222 58 chr2 206561216 206561994 -44125860 - L2 LINE L2 -343 2971 2066 1025 256 151 38 chr2 206562002 206562601 -44125253 + L2 LINE L2 2644 3311 -2 4189 168 62 11 chr2 206562802 206563624 -44124230 - L1MB7 LINE L1 0 6184 5321 480 71 179 0 chr2 206563630 206563714 -44124140 - L1MA4A LINE L1 -7 6296 6198 270 133 0 0 chr2 206563713 206563758 -44124096 + L1M1 LINE L1 5594 5638 -662 * 718 154 70 0 chr2 206563746 206563902 -44123952 - L1MB7 LINE L1 -809 5337 5171 200 227 13 40 chr2 206565581 206565646 -44122208 + (TA)n Simple_repeat Simple_repeat 1 65 -8 2068 119 3 26 chr2 206565646 206565948 -44121906 - AluSx SINE Alu -17 295 1 200 227 13 40 chr2 206565948 206565957 -44121897 + (TA)n Simple_repeat Simple_repeat 65 73 0 2440 81 0 10 chr2 206566701 206566999 -44120855 + AluSp SINE Alu 1 295 -18 23 0 0 0 chr2 206566999 206567022 -44120832 + AT_rich Low_complexity Low_complexity 1 23 0 340 304 126 5 chr2 206567692 206567883 -44119971 - MER102a DNA MER1_type 0 330 117 2144 116 0 0 chr2 206569390 206569674 -44118180 + AluSx SINE Alu 13 296 -16 1533 220 55 91 chr2 206569746 206570306 -44117548 + MLT1F LTR MaLR 1 540 -2 2005 134 3 3 chr2 206570685 206570990 -44116864 + AluSx SINE Alu 1 305 0 273 98 0 0 chr2 206571495 206571536 -44116318 + (GA)n Simple_repeat Simple_repeat 2 42 0 360 43 0 0 chr2 206571536 206571582 -44116272 + (TG)n Simple_repeat Simple_repeat 2 47 0 292 108 0 0 chr2 206571650 206571687 -44116167 + tRNA-Arg-AGA tRNA tRNA 2 38 -38 285 246 53 35 chr2 206573015 206573129 -44114725 - L1ME LINE L1 -642 5524 5409 22 0 0 0 chr2 206575121 206575143 -44112711 + AT_rich Low_complexity Low_complexity 1 22 0 378 61 0 0 chr2 206575274 206575323 -44112531 + (TG)n Simple_repeat Simple_repeat 1 49 0 600 266 146 43 chr2 206576750 206577215 -44110639 + L1ME4a LINE L1 5382 5933 -188 1572 178 22 41 chr2 206577728 206577918 -44109936 - AluJb SINE Alu -3 309 126 234 0 0 0 chr2 206577918 206577944 -44109910 + (TA)n Simple_repeat Simple_repeat 2 27 0 1572 178 22 41 chr2 206577944 206578068 -44109786 - AluJb SINE Alu -186 126 1 241 284 83 9 chr2 206579415 206579524 -44108330 + MER94 DNA DNA 17 133 -1 181 175 0 50 chr2 206579915 206579955 -44107899 + L2 LINE L2 3231 3268 -4 193 282 84 14 chr2 206580442 206580513 -44107341 - L2 LINE L2 -1 3271 3196 1767 142 86 10 chr2 206580568 206580871 -44106983 - Tigger1 DNA MER2_type -15 2403 2078 476 30 15 0 chr2 206580876 206580943 -44106911 - AluY SINE Alu -3 309 242 3143 124 53 12 chr2 206580943 206581436 -44106418 - Tigger1 DNA MER2_type -1905 513 1 415 282 24 0 chr2 206581527 206581651 -44106203 + MIR SINE MIR 48 174 -88 400 262 154 23 chr2 206581980 206582194 -44105660 + MIR SINE MIR 21 262 0 907 133 8 0 chr2 206582194 206582322 -44105532 - AluJo SINE Alu -178 134 6 250 299 56 21 chr2 206583540 206583684 -44104170 - MIR3 SINE MIR -27 181 33 3912 190 82 17 chr2 206585492 206587036 -44100818 + L1PBa LINE L1 6 1794 -5069 34 55 0 0 chr2 206637102 206637157 -44050697 + AT_rich Low_complexity Low_complexity 1 55 0 1394 230 124 25 chr2 206637250 206637693 -44050161 + L1ME3A LINE L1 6 492 -5578 4207 176 15 6 chr2 206637892 206638671 -44049183 + L1MB7 LINE L1 5359 6144 -40 510 228 102 9 chr2 206638718 206638933 -44048921 + L1M4 LINE L1 3106 3340 -2806 40924 66 2 5 chr2 206638933 206645103 -44042751 + L1PA5 LINE L1 3 6152 -2 1549 260 92 5 chr2 206645099 206645707 -44042147 + L1M4 LINE L1 3331 3991 -2155 * 2106 236 117 111 chr2 206645790 206646434 -44041420 + L1ME3A LINE L1 2176 2815 -3265 564 227 42 0 chr2 206646434 206646553 -44041301 + FLAM_A SINE Alu 10 133 -9 2106 236 117 111 chr2 206646553 206647049 -44040805 + L1ME3A LINE L1 2815 3306 -2774 2105 132 0 0 chr2 206647049 206647344 -44040510 + AluSq SINE Alu 3 297 -16 2106 236 117 111 chr2 206647344 206647987 -44039867 + L1ME3A LINE L1 3306 3944 -2136 2322 98 0 3 chr2 206647987 206648284 -44039570 + AluSc SINE Alu 1 296 -13 2106 236 117 111 chr2 206648284 206648332 -44039522 + L1ME3A LINE L1 3944 3990 -2090 186 43 0 0 chr2 206648332 206648355 -44039499 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2106 236 117 111 chr2 206648355 206648522 -44039332 + L1ME3A LINE L1 3990 4308 -1772 932 126 46 0 chr2 206648523 206648674 -44039180 + MER41A LTR ERV1 397 554 0 4323 133 19 5 chr2 206648674 206649319 -44038535 + MER41B-int LTR ERV1 1 654 -5292 3693 117 17 21 chr2 206649329 206649890 -44037964 + MER41B-int LTR ERV1 1457 2017 -3929 2348 91 0 3 chr2 206649890 206650188 -44037666 + AluSq SINE Alu 7 303 -10 3693 117 17 21 chr2 206650188 206650200 -44037654 + MER41B-int LTR ERV1 2017 2028 -3918 3702 140 19 34 chr2 206650202 206650992 -44036862 + MER41B-int LTR ERV1 2167 3357 -3014 * 12692 110 16 10 chr2 206650983 206653199 -44034655 + MER41B-int LTR ERV1 4096 5941 -5 3596 121 7 6 chr2 206653210 206653756 -44034098 + MER41B LTR ERV1 1 547 -88 457 235 186 0 chr2 206653816 206653918 -44033936 + FLAM_A SINE Alu 1 121 -12 1176 268 99 23 chr2 206653988 206654562 -44033292 + L1ME3A LINE L1 4391 5008 -1072 270 145 65 0 chr2 206654595 206654657 -44033197 - L1MB3 LINE L1 -8 6175 6110 2789 122 75 6 chr2 206654669 206655146 -44032708 - L1MA4 LINE L1 -279 6203 5694 14175 174 55 8 chr2 206655147 206656856 -44030998 - L1MA4 LINE L1 -840 5488 3574 1561 160 9 88 chr2 206656856 206657175 -44030679 - AluJo SINE Alu -18 294 1 14175 174 55 8 chr2 206657175 206658480 -44029374 - L1MA4 LINE L1 -2754 3574 2332 6022 202 56 13 chr2 206658480 206659769 -44028085 - L1MA4 LINE L1 -4065 1263 31 1473 89 0 0 chr2 206659769 206659960 -44027894 - AluY SINE Alu -2 309 119 6022 202 56 13 chr2 206659960 206660589 -44027265 - L1MA4 LINE L1 -5297 31 49 243 0 0 0 chr2 206660589 206660616 -44027238 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 6022 202 56 13 chr2 206660616 206660664 -44027190 - L1MA4 LINE L1 -5278 50 6 231 266 76 0 chr2 206660751 206660830 -44027024 + L1ME3A LINE L1 5071 5155 -925 1949 160 0 0 chr2 206660844 206661126 -44026728 + AluJb SINE Alu 2 283 -29 2681 213 50 52 chr2 206661151 206661413 -44026441 + L1ME3A LINE L1 5283 5544 -560 396 0 0 0 chr2 206661413 206661457 -44026397 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 2681 213 50 52 chr2 206661457 206661568 -44026286 + L1ME3A LINE L1 5544 5654 -450 2000 157 0 0 chr2 206661568 206661868 -44025986 + AluSx SINE Alu 1 300 -12 2681 213 50 52 chr2 206661868 206662250 -44025604 + L1ME3A LINE L1 5654 6038 -66 208 314 14 14 chr2 206662687 206662757 -44025097 + MIR3 SINE MIR 99 168 -40 2455 76 0 0 chr2 206662826 206663127 -44024727 - AluY SINE Alu -10 301 1 250 236 42 0 chr2 206663736 206663808 -44024046 - L1ME4a LINE L1 -87 6034 5960 842 163 167 50 chr2 206664112 206664351 -44023503 + L1M4 LINE L1 4625 4891 -1255 296 273 224 24 chr2 206664332 206664497 -44023357 + L1MDa LINE L1 425 622 -5918 * 307 228 43 43 chr2 206664552 206664644 -44023210 + MER88 LTR ERVL 81 172 -292 * 1304 234 45 36 chr2 206664566 206664922 -44022932 - MER74B LTR ERVL -75 547 189 1486 184 159 3 chr2 206664922 206665231 -44022623 + MSTD LTR MaLR 1 357 -39 371 109 0 0 chr2 206665273 206665328 -44022526 + MSTD LTR MaLR 342 396 0 561 211 24 24 chr2 206665328 206665451 -44022403 - MER74B LTR ERVL -429 193 71 3327 221 92 35 chr2 206665466 206666558 -44021296 + L1MDa LINE L1 618 1772 -4768 934 292 96 67 chr2 206666590 206667461 -44020393 + L1M4 LINE L1 3087 3983 -2163 2607 259 220 29 chr2 206667536 206668936 -44018918 - L2 LINE L2 -18 3295 1612 494 277 98 16 chr2 206668957 206669213 -44018641 + L1MC4a LINE L1 5716 5992 -1816 251 111 0 22 chr2 206670280 206670325 -44017529 + (CATA)n Simple_repeat Simple_repeat 1 44 0 21 36 0 0 chr2 206672000 206672028 -44015826 + AT_rich Low_complexity Low_complexity 1 28 0 273 57 0 0 chr2 206672601 206672636 -44015218 + (CA)n Simple_repeat Simple_repeat 2 36 0 218 299 98 92 chr2 206673403 206673577 -44014277 - L2 LINE L2 -50 3222 3048 442 251 49 76 chr2 206673860 206674083 -44013771 + L2 LINE L2 9 225 -3089 738 225 45 30 chr2 206674083 206674505 -44013349 + MLT1D LTR MaLR 1 505 0 927 238 160 22 chr2 206674506 206674863 -44012991 + L2 LINE L2 237 642 -2672 3866 246 175 22 chr2 206674863 206676322 -44011532 + L2 LINE L2 1391 3150 -163 1952 118 3 21 chr2 206676322 206676655 -44011199 + AluSx SINE Alu 1 328 0 3866 246 175 22 chr2 206676655 206676849 -44011005 + L2 LINE L2 3150 3313 0 230 171 0 0 chr2 206676888 206676929 -44010925 - L2 LINE L2 -300 2972 2932 3763 248 88 40 chr2 206676979 206678475 -44009379 + L2 LINE L2 1738 3311 -2 288 325 121 13 chr2 206678487 206678644 -44009210 + L3 LINE CR1 1372 1545 -32 407 314 123 29 chr2 206679049 206679273 -44008581 + MIR SINE MIR 5 246 -16 232 322 78 9 chr2 206679533 206679648 -44008206 - L2 LINE L2 -3 3310 3188 434 259 60 0 chr2 206681083 206681199 -44006655 + MIR SINE MIR 63 185 -77 2714 26 0 0 chr2 206681383 206681694 -44006160 + AluY SINE Alu 1 311 0 510 261 104 106 chr2 206682384 206682835 -44005019 - LTR67 LTR ERVL 0 557 106 207 69 0 0 chr2 206682835 206682864 -44004990 + (ATG)n Simple_repeat Simple_repeat 1 29 0 510 261 104 106 chr2 206682864 206682968 -44004886 - LTR67 LTR ERVL -451 106 3 648 203 70 123 chr2 206683082 206683309 -44004545 - MIR SINE MIR -10 252 38 748 154 0 8 chr2 206683604 206683832 -44004022 + FLAM_C SINE Alu 1 227 0 479 115 52 31 chr2 206685316 206685412 -44002442 + MER4A LTR ERV1 1 98 -566 1863 114 3 27 chr2 206685412 206685766 -44002088 + MER4A LTR ERV1 261 664 0 3836 132 8 7 chr2 206686164 206686764 -44001090 + MER7C DNA MER2_type 2 602 0 253 265 43 8 chr2 206687002 206687119 -44000735 - L1P LINE L1 -3749 2397 2277 2025 125 4 4 chr2 206687205 206687484 -44000370 - AluSq SINE Alu -20 293 15 26 30 0 0 chr2 206687647 206687680 -44000174 + AT_rich Low_complexity Low_complexity 1 33 0 694 278 71 61 chr2 206687826 206687926 -43999928 - HAL1b LINE L1 -485 863 766 2773 89 0 3 chr2 206687926 206688287 -43999567 - THE1B LTR MaLR -4 360 1 694 278 71 61 chr2 206688287 206688944 -43998910 - HAL1b LINE L1 -582 766 98 1165 205 144 88 chr2 206689378 206689865 -43997989 + MLT2B2 LTR ERVL 1 514 -1 1967 107 4 4 chr2 206690030 206690291 -43997563 + AluSx SINE Alu 1 261 -51 180 111 0 0 chr2 206690291 206690318 -43997536 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 249 359 36 21 chr2 206691433 206691625 -43996229 + L2 LINE L2 88 282 -3032 1056 130 86 0 chr2 206691655 206691817 -43996037 - AluSg/x SINE Alu -3 309 134 3654 326 123 15 chr2 206691839 206693782 -43994072 + L2 LINE L2 343 2494 -820 649 171 101 0 chr2 206693788 206693917 -43993937 + LTR16B LTR ERVL 8 149 -315 638 103 0 0 chr2 206694023 206694110 -43993744 - AluY SINE Alu -181 130 44 1805 176 7 0 chr2 206694210 206694506 -43993348 + AluJb SINE Alu 1 298 -14 751 106 0 0 chr2 206695008 206695121 -43992733 + L1MA3 LINE L1 6193 6305 0 335 130 70 0 chr2 206695195 206695295 -43992559 + (TA)n Simple_repeat Simple_repeat 2 108 0 1405 125 24 0 chr2 206695640 206695848 -43992006 + AluJb SINE Alu 87 299 -13 1583 318 112 29 chr2 206695888 206696941 -43990913 + L2 LINE L2 1774 2914 -400 324 266 101 0 chr2 206696943 206697082 -43990772 - LTR50 LTR ERVL 0 795 643 23 0 0 0 chr2 206697406 206697429 -43990425 + AT_rich Low_complexity Low_complexity 1 23 0 602 220 0 38 chr2 206697473 206697632 -43990222 - LTR41 LTR ERVL -620 153 1 320 356 8 99 chr2 206697722 206697975 -43989879 + L2 LINE L2 3004 3233 -39 971 267 108 7 chr2 206698217 206698474 -43989380 - L1ME4a LINE L1 -94 6027 5797 2291 124 0 0 chr2 206698474 206698781 -43989073 - AluSx SINE Alu -5 307 1 971 267 108 7 chr2 206698781 206698957 -43988897 - L1ME4a LINE L1 -324 5797 5550 231 250 44 0 chr2 206699751 206699819 -43988035 + L1ME LINE L1 5530 5600 -521 544 269 48 15 chr2 206700279 206700506 -43987348 + L1MEc LINE L1 1018 1214 -5332 551 241 13 70 chr2 206700549 206700855 -43986999 + L1MEc LINE L1 1391 1635 -4907 * 1354 248 84 11 chr2 206700853 206701389 -43986465 + L1MEc LINE L1 2888 3462 -3182 3226 218 148 22 chr2 206701438 206702816 -43985038 + L1MEc LINE L1 3839 5389 -1255 203 205 277 48 chr2 206703328 206703411 -43984443 - L2 LINE L2 0 3272 3171 1285 186 39 19 chr2 206703544 206703855 -43983999 - MER33 DNA MER1_type -1 323 7 2772 155 2 2 chr2 206704552 206704978 -43982876 + MSTB LTR MaLR 1 426 0 202 308 173 15 chr2 206705164 206705297 -43982557 + MER5A DNA MER1_type 36 189 0 304 258 157 0 chr2 206706604 206706693 -43981161 - MIR SINE MIR -69 139 37 445 233 64 109 chr2 206709174 206709531 -43978323 - MLT1K LTR MaLR -1 587 247 265 217 17 0 chr2 206710157 206710217 -43977637 - MER58 DNA MER1_type -2142 278 218 275 167 0 37 chr2 206710218 206710272 -43977582 - MER58 DNA MER1_type -163 52 1 1435 175 72 21 chr2 206712811 206713102 -43974752 + AluJo SINE Alu 1 306 -6 186 161 0 0 chr2 206713764 206713795 -43974059 - MER5B DNA MER1_type -60 118 88 1902 157 14 0 chr2 206713818 206714111 -43973743 + AluJo SINE Alu 1 297 -15 727 214 122 5 chr2 206714191 206714387 -43973467 + MER20 DNA MER1_type 1 219 0 1140 202 14 9 chr2 206715697 206715920 -43971934 + AluJb SINE Alu 72 295 -17 2033 126 0 0 chr2 206715925 206716203 -43971651 + AluSx SINE Alu 5 281 -31 234 29 29 0 chr2 206716203 206716237 -43971617 + (CAA)n Simple_repeat Simple_repeat 2 180 0 340 292 94 56 chr2 206717799 206718032 -43969822 + MIR SINE MIR 15 256 -6 219 288 0 0 chr2 206718248 206718307 -43969547 + CT-rich Low_complexity Low_complexity 3 61 0 374 292 33 8 chr2 206718383 206718503 -43969351 - MER5A DNA MER1_type -65 124 2 492 333 71 0 chr2 206718582 206718780 -43969074 - L2 LINE L2 -169 3103 2892 1687 169 0 27 chr2 206718802 206719097 -43968757 + AluJb SINE Alu 5 291 -21 185 136 0 45 chr2 206719667 206719711 -43968143 + (TTTTA)n Simple_repeat Simple_repeat 5 46 0 1033 73 0 0 chr2 206719734 206719858 -43967996 - AluSq/x SINE Alu -188 125 2 25 31 0 0 chr2 206720650 206720682 -43967172 + AT_rich Low_complexity Low_complexity 1 32 0 304 290 31 80 chr2 206723040 206723202 -43964652 - L2 LINE L2 -256 3057 2904 363 44 0 0 chr2 206724977 206725022 -43962832 + (CA)n Simple_repeat Simple_repeat 2 46 0 1245 159 81 78 chr2 206725705 206726076 -43961778 + L1MC5 LINE L1 6886 7257 -704 337 215 103 19 chr2 206726067 206726174 -43961680 - L1MC5 LINE L1 -591 7370 7255 * 1433 206 59 41 chr2 206726189 206726649 -43961205 + L1MC5 LINE L1 7268 7735 -226 217 158 0 0 chr2 206727054 206727092 -43960762 + MER5A DNA MER1_type 7 44 -145 222 37 0 0 chr2 206727497 206727524 -43960330 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 246 354 0 0 chr2 206727709 206727805 -43960049 + MIR SINE MIR 73 168 -94 24 32 0 0 chr2 206728088 206728119 -43959735 + AT_rich Low_complexity Low_complexity 1 31 0 1956 94 0 23 chr2 206728225 206728490 -43959364 + AluY SINE Alu 1 259 -52 549 346 63 27 chr2 206729329 206729739 -43958115 - L2 LINE L2 -576 2738 2314 203 152 0 0 chr2 206729754 206729787 -43958067 + (CA)n Simple_repeat Simple_repeat 1 33 0 254 169 72 84 chr2 206731528 206731611 -43956243 - MLT1J LTR MaLR -8 503 422 444 273 111 20 chr2 206731611 206731809 -43956045 - LTR16B LTR ERVL 0 464 249 1509 261 48 22 chr2 206732016 206732430 -43955424 - MLT1J LTR MaLR -85 426 2 383 261 54 0 chr2 206733024 206733116 -43954738 - L2 LINE L2 0 3272 3176 637 175 140 0 chr2 206733191 206733305 -43954549 + FLAM_A SINE Alu 1 130 -3 382 270 92 0 chr2 206733386 206733538 -43954316 + L2 LINE L2 2593 2758 -556 442 263 59 21 chr2 206733553 206733739 -43954115 - L1MCa LINE L1 -5018 1408 1216 435 258 26 45 chr2 206734489 206734644 -43953210 - PABL_B LTR ERV1 -515 152 1 333 262 126 0 chr2 206734740 206734843 -43953011 + MIR SINE MIR 30 145 -63 1723 176 10 7 chr2 206735425 206735726 -43952128 + AluJb SINE Alu 1 302 -10 263 211 0 14 chr2 206735727 206735798 -43952056 + GA-rich Low_complexity Low_complexity 4 73 0 25 0 0 0 chr2 206735816 206735841 -43952013 + AT_rich Low_complexity Low_complexity 1 25 0 2206 112 0 7 chr2 206736062 206736356 -43951498 + AluSc SINE Alu 1 292 -17 25 0 0 0 chr2 206736756 206736781 -43951073 + AT_rich Low_complexity Low_complexity 1 25 0 526 265 96 24 chr2 206736837 206737003 -43950851 - MER5B DNA MER1_type 0 178 1 352 237 237 0 chr2 206737106 206737203 -43950651 - MER5A DNA MER1_type -12 177 58 818 136 0 21 chr2 206737370 206737510 -43950344 - AluSg/x SINE Alu 0 310 174 648 290 40 35 chr2 206737547 206737747 -43950107 - MIR SINE MIR -1 261 61 307 246 14 0 chr2 206737747 206737816 -43950038 - L1MC5 LINE L1 -385 7576 7507 269 263 32 32 chr2 206738390 206738485 -43949369 - MER5A DNA MER1_type -1 188 94 2234 181 64 45 chr2 206738724 206739239 -43948615 + L1MA10 LINE L1 5810 6334 0 1994 146 0 7 chr2 206739249 206739550 -43948304 + AluSx SINE Alu 1 299 -13 208 338 38 12 chr2 206740174 206740254 -43947600 + L2 LINE L2 3025 3106 -166 186 262 280 28 chr2 206740330 206740437 -43947417 + L2 LINE L2 3139 3272 0 31 82 0 0 chr2 206740541 206740614 -43947240 + AT_rich Low_complexity Low_complexity 1 73 0 25 75 0 0 chr2 206743023 206743076 -43944778 + AT_rich Low_complexity Low_complexity 1 53 0 4966 106 8 3 chr2 206743356 206744089 -43943765 - L1P LINE L1 -762 5384 4648 490 91 0 15 chr2 206744223 206744289 -43943565 + Alu SINE Alu 224 288 -22 2365 92 10 0 chr2 206744336 206744642 -43943212 - AluY SINE Alu -2 309 1 291 289 10 21 chr2 206746068 206746165 -43941689 + MIR SINE MIR 37 132 -76 1358 206 4 39 chr2 206746172 206746453 -43941401 + AluJo SINE Alu 9 279 -33 261 57 0 0 chr2 206746455 206746490 -43941364 + (TAA)n Simple_repeat Simple_repeat 1 35 0 271 292 0 0 chr2 206746491 206746563 -43941291 + MIR SINE MIR 159 230 -32 243 278 0 42 chr2 206746857 206746929 -43940925 + L2 LINE L2 3200 3268 -4 186 376 10 0 chr2 206747068 206747169 -43940685 - MIR SINE MIR -42 220 119 753 181 7 28 chr2 206748164 206748308 -43939546 - FLAM_C SINE Alu -1 142 2 982 292 48 16 chr2 206748666 206748981 -43938873 - MER102b DNA MER1_type -16 325 1 2221 93 7 0 chr2 206749283 206749574 -43938280 + AluY SINE Alu 1 293 -18 253 277 21 32 chr2 206751416 206751510 -43936344 - LTR67 LTR ERVL -1 556 464 288 0 0 0 chr2 206751878 206751910 -43935944 + (CA)n Simple_repeat Simple_repeat 2 33 0 187 299 45 0 chr2 206752165 206752232 -43935622 + L2 LINE L2 2600 2669 -645 401 287 134 46 chr2 206752478 206752694 -43935160 + MIR SINE MIR 13 247 -15 323 256 191 51 chr2 206754299 206754464 -43933390 - L1ME4a LINE L1 -216 5905 5764 1680 94 0 30 chr2 206754464 206754699 -43933155 + AluSx SINE Alu 59 286 -26 198 0 0 0 chr2 206754699 206754721 -43933133 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 323 256 191 51 chr2 206754721 206754769 -43933085 - L1ME4a LINE L1 -356 5765 5661 2366 105 0 0 chr2 206757248 206757554 -43930300 + AluSx SINE Alu 2 307 -5 1435 146 38 21 chr2 206757893 206758132 -43929722 - AluJb SINE Alu -69 243 1 424 306 0 0 chr2 206758633 206758731 -43929123 + MER115 DNA AcHobo 332 429 -264 1787 119 165 73 chr2 206758751 206759121 -43928733 - MER4A LTR ERV1 0 664 261 685 101 0 10 chr2 206759121 206759220 -43928634 - MER4A LTR ERV1 -566 98 1 288 209 75 0 chr2 206759220 206759280 -43928574 + Zaphod DNA AcHobo 3967 4031 0 543 259 97 22 chr2 206759444 206759629 -43928225 + MIR SINE MIR 64 262 0 1893 212 63 93 chr2 206760015 206760779 -43927075 - LTR1B LTR ERV1 -13 813 1 207 0 0 0 chr2 206761044 206761067 -43926787 + (A)n Simple_repeat Simple_repeat 1 23 0 333 182 52 13 chr2 206762304 206762381 -43925473 - MLT1K LTR MaLR -19 569 490 2096 125 13 0 chr2 206762425 206762730 -43925124 - AluSx SINE Alu -3 309 1 450 95 0 0 chr2 206763858 206763921 -43923933 - Alu SINE Alu -5 307 245 1735 149 47 4 chr2 206763923 206764198 -43923656 - AluJo SINE Alu -25 287 1 2491 45 0 0 chr2 206765220 206765507 -43922347 - AluY SINE Alu -24 287 1 225 0 0 0 chr2 206766149 206766174 -43921680 + (A)n Simple_repeat Simple_repeat 1 25 0 1972 156 0 28 chr2 206766269 206766590 -43921264 - AluJo SINE Alu 0 312 1 187 326 0 0 chr2 206766721 206766767 -43921087 + L2 LINE L2 3262 3307 -6 685 317 14 9 chr2 206766879 206767100 -43920754 + MIR SINE MIR 8 229 -33 823 227 134 94 chr2 206767111 206767842 -43920012 - LTR41 LTR ERVL -13 760 1 2267 86 10 0 chr2 206767874 206768165 -43919689 + AluSx SINE Alu 1 294 -18 816 228 89 20 chr2 206768269 206768471 -43919383 + MIR SINE MIR 7 222 -40 905 181 122 54 chr2 206768743 206768948 -43918906 + MER20 DNA MER1_type 1 219 0 760 84 11 0 chr2 206769082 206769177 -43918677 + AluSq/x SINE Alu 36 131 -181 1628 134 18 46 chr2 206771132 206771415 -43916439 + AluJo SINE Alu 21 295 -17 2304 139 67 5 chr2 206774564 206774953 -43912901 + MSTB LTR MaLR 1 413 -13 292 259 24 0 chr2 206774964 206775049 -43912805 - MER103 DNA DNA -30 136 50 1470 135 9 5 chr2 206775688 206775903 -43911951 - MER20 DNA MER1_type -3 216 1 181 188 125 31 chr2 206776969 206777033 -43910821 + MIR3 SINE MIR 15 84 -124 923 245 30 25 chr2 206777066 206777303 -43910551 + MIR SINE MIR 14 251 -11 1709 130 67 10 chr2 206777596 206777896 -43909958 + L1MB5 LINE L1 5852 6168 -6 1683 173 144 0 chr2 206778218 206778565 -43909289 - L1ME1 LINE L1 -5 6161 5765 971 242 70 42 chr2 206778576 206779109 -43908745 - L1ME4a LINE L1 0 6121 5522 26 0 0 0 chr2 206779355 206779381 -43908473 + AT_rich Low_complexity Low_complexity 1 26 0 805 22 0 0 chr2 206779414 206779503 -43908351 - MER85 DNA T2_type -1 138 50 1876 95 0 0 chr2 206779511 206779742 -43908112 - AluSc SINE Alu -78 231 1 2035 114 11 4 chr2 206780017 206780319 -43907535 - AluSp SINE Alu 0 304 1 887 161 0 0 chr2 206780355 206780492 -43907362 - FRAM SINE Alu -38 138 2 360 229 82 16 chr2 206780683 206780805 -43907049 + MIR SINE MIR 84 213 -49 21 0 0 0 chr2 206781023 206781044 -43906810 + AT_rich Low_complexity Low_complexity 1 21 0 197 243 171 0 chr2 206781956 206782026 -43905828 - MIR3 SINE MIR -9 199 118 188 65 0 32 chr2 206782108 206782139 -43905715 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 188 211 0 0 chr2 206782154 206782192 -43905662 + MER5A DNA MER1_type 152 189 0 18541 29 0 1 chr2 206782980 206785824 -43902030 + L1PA3 LINE L1 3314 6151 -4 348 316 68 23 chr2 206786102 206786235 -43901619 - L2 LINE L2 0 3272 3134 2449 88 3 0 chr2 206786275 206786583 -43901271 + AluSp SINE Alu 1 309 -4 354 309 55 0 chr2 206786683 206786793 -43901061 + L2 LINE L2 3197 3312 -1 268 291 37 67 chr2 206786887 206787021 -43900833 + L2 LINE L2 3184 3313 0 2258 77 0 3 chr2 206787703 206787989 -43899865 + AluY SINE Alu 1 285 -26 803 299 21 16 chr2 206788781 206788975 -43898879 + MER91A DNA MER1_type 1 195 -1 452 281 111 45 chr2 206790933 206791168 -43896686 + MIR SINE MIR 20 261 -1 844 120 0 73 chr2 206791327 206791477 -43896377 - FLAM_C SINE Alu -4 139 1 1935 110 48 0 chr2 206791598 206791893 -43895961 - AluSx SINE Alu 0 308 1 492 294 52 65 chr2 206792569 206792817 -43895037 - MIR SINE MIR -2 260 16 205 325 63 8 chr2 206793099 206793225 -43894629 + MER5A DNA MER1_type 1 133 -56 201 39 0 0 chr2 206793680 206793706 -43894148 + (CACGT)n Simple_repeat Simple_repeat 1 26 0 244 270 113 43 chr2 206793837 206793952 -43893902 - MIR SINE MIR -67 141 19 295 294 12 0 chr2 206794133 206794218 -43893636 - MIR SINE MIR -10 252 167 1204 184 136 18 chr2 206794559 206794831 -43893023 - MER58B DNA MER1_type -37 304 1 836 299 62 48 chr2 206794897 206795379 -43892475 - L2 LINE L2 -279 3034 2544 10800 30 1 3 chr2 206795482 206796796 -43891058 + L1P LINE L1 2066 3376 -2770 1922 183 69 34 chr2 206797699 206797774 -43890080 + MLT1C LTR MaLR 5 76 -391 2601 121 8 6 chr2 206797774 206798137 -43889717 - THE1B LTR MaLR 0 364 1 1922 183 69 34 chr2 206798137 206798508 -43889346 + MLT1C LTR MaLR 76 467 0 256 210 48 16 chr2 206798622 206798684 -43889170 + MER69 DNA AcHobo 20 83 -94 31 0 0 0 chr2 206798693 206798724 -43889130 + AT_rich Low_complexity Low_complexity 1 31 0 1604 159 17 44 chr2 206799436 206799731 -43888123 + AluJb SINE Alu 1 287 -25 188 247 96 0 chr2 206800176 206800249 -43887605 + L2 LINE L2 2958 3037 -276 26 30 0 0 chr2 206800908 206800941 -43886913 + AT_rich Low_complexity Low_complexity 1 33 0 900 224 101 0 chr2 206800944 206801163 -43886691 - MIR SINE MIR -21 241 1 273 330 36 9 chr2 206802808 206802920 -43884934 + L2 LINE L2 3191 3305 -8 186 191 29 15 chr2 206803611 206803679 -43884175 + CT-rich Low_complexity Low_complexity 4 72 0 835 263 136 42 chr2 206803711 206804168 -43883686 - LTR33 LTR ERVL -19 502 3 306 0 0 0 chr2 206804472 206804506 -43883348 + (CA)n Simple_repeat Simple_repeat 2 35 0 428 327 65 30 chr2 206805768 206805967 -43881887 + MIR SINE MIR 51 256 -6 292 346 161 28 chr2 206806050 206806267 -43881587 - L3 LINE CR1 -5 1572 1327 182 342 80 46 chr2 206806942 206807205 -43880649 - L2 LINE L2 -696 2618 2347 267 270 42 63 chr2 206807411 206807600 -43880254 + L2 LINE L2 3124 3308 -5 1120 201 26 79 chr2 206807965 206808268 -43879586 - MLT1G LTR MaLR 0 590 304 413 271 92 19 chr2 206808307 206808479 -43879375 + L1ME LINE L1 5478 5642 -479 2283 41 8 0 chr2 206808504 206808771 -43879083 + AluY SINE Alu 23 291 -20 2159 209 85 9 chr2 206809364 206809813 -43878041 + MER21B LTR ERV1 55 537 -326 372 244 0 0 chr2 206809814 206809892 -43877962 + Tigger5 DNA MER2_type 2 79 -2244 460 182 13 0 chr2 206809913 206809990 -43877864 + MER2 DNA MER2_type 268 345 0 * 1012 153 60 116 chr2 206809990 206810257 -43877597 + MER21B LTR ERV1 611 862 -1 230 289 211 54 chr2 206811583 206811877 -43875977 + L2 LINE L2 2933 3272 0 443 290 69 8 chr2 206812786 206812917 -43874937 + MIR SINE MIR 74 212 -50 1955 130 34 0 chr2 206813025 206813317 -43874537 + AluSq SINE Alu 1 302 -11 342 0 0 0 chr2 206813317 206813355 -43874499 + (TA)n Simple_repeat Simple_repeat 2 39 0 25 65 0 0 chr2 206813763 206813809 -43874045 + AT_rich Low_complexity Low_complexity 1 46 0 195 129 0 0 chr2 206814755 206814786 -43873068 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 27 0 0 0 chr2 206814921 206814948 -43872906 + AT_rich Low_complexity Low_complexity 1 27 0 956 297 105 5 chr2 206815139 206815520 -43872334 - LTR16B LTR ERVL 0 464 46 305 309 0 10 chr2 206815917 206816014 -43871840 + MIR3 SINE MIR 111 206 -2 250 406 29 6 chr2 206816033 206816203 -43871651 + MIR3 SINE MIR 1 174 -34 2342 159 53 19 chr2 206816361 206816777 -43871077 - L1MB1 LINE L1 -5 6163 5734 359 70 0 0 chr2 206817911 206817954 -43869900 - LTR8 LTR ERV1 -102 589 547 318 277 140 3 chr2 206818237 206818443 -43869411 + MLT1F1 LTR MaLR 42 276 -298 502 223 54 0 chr2 206818550 206818680 -43869174 + MLT1F1 LTR MaLR 425 561 -6 444 208 156 45 chr2 206818953 206819107 -43868747 + MER5B DNA MER1_type 5 175 -3 738 318 131 50 chr2 206819112 206819894 -43867960 + L2 LINE L2 2221 3090 -182 1112 319 103 35 chr2 206820035 206820752 -43867102 + L3 LINE CR1 564 1329 -248 196 341 59 15 chr2 206821493 206821628 -43866226 - L2 LINE L2 -632 2682 2542 574 205 151 42 chr2 206821903 206821925 -43865929 + MER5A DNA MER1_type 4 22 -167 2037 184 63 31 chr2 206821925 206822414 -43865440 - MLT1D LTR MaLR 0 505 1 574 205 151 42 chr2 206822414 206822557 -43865297 + MER5A DNA MER1_type 22 187 -2 259 300 0 0 chr2 206823345 206823415 -43864439 - L2 LINE L2 -2 3311 3242 21 0 0 0 chr2 206823694 206823715 -43864139 + AT_rich Low_complexity Low_complexity 1 21 0 474 244 125 23 chr2 206823957 206824133 -43863721 + L2 LINE L2 3119 3312 -1 568 340 57 5 chr2 206824404 206824613 -43863241 - MIR SINE MIR -10 252 33 225 325 167 0 chr2 206824739 206824853 -43863001 + L2 LINE L2 3127 3259 -13 297 242 59 85 chr2 206825183 206825336 -43862518 - L2 LINE L2 0 3313 3165 32 0 0 0 chr2 206827387 206827419 -43860435 + AT_rich Low_complexity Low_complexity 1 32 0 198 0 0 0 chr2 206827676 206827698 -43860156 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 234 91 0 0 chr2 206828297 206828330 -43859524 + (TA)n Simple_repeat Simple_repeat 1 33 0 206 350 110 10 chr2 206829422 206829522 -43858332 + L3b LINE CR1 1465 1574 -9 505 103 0 0 chr2 206829841 206829909 -43857945 + AluJ/FRAM SINE Alu 232 299 -13 1767 159 3 17 chr2 206830064 206830360 -43857494 + AluJb SINE Alu 9 300 -12 1550 153 58 52 chr2 206831641 206831949 -43855905 + AluJo SINE Alu 2 311 -1 22 0 0 0 chr2 206832044 206832066 -43855788 + AT_rich Low_complexity Low_complexity 1 22 0 208 67 0 44 chr2 206832958 206833003 -43854851 + (TTTAA)n Simple_repeat Simple_repeat 4 46 0 1692 171 0 4 chr2 206835577 206835851 -43852003 + AluJo SINE Alu 1 273 -39 338 0 24 0 chr2 206835863 206835905 -43851949 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 835 171 43 37 chr2 206836997 206837161 -43850693 - FRAM SINE Alu -11 165 1 264 211 83 58 chr2 206837425 206837518 -43850336 + MIR3 SINE MIR 69 165 -43 930 224 129 89 chr2 206837525 206838278 -43849576 - MER20B DNA MER1_type 0 784 2 189 358 32 11 chr2 206838342 206838437 -43849417 - L2 LINE L2 -24 3289 3193 206 383 75 0 chr2 206838631 206838751 -43849103 - L2 LINE L2 -22 3250 3122 1952 144 10 13 chr2 206839541 206839839 -43848015 + AluJb SINE Alu 1 297 -15 1765 199 53 63 chr2 206839978 206840501 -43847353 - MER44D DNA MER2_type -1 604 32 240 367 0 0 chr2 206840684 206840763 -43847091 - MIR3 SINE MIR -14 194 116 1851 177 0 7 chr2 206841494 206841799 -43846055 + AluJo SINE Alu 4 306 -6 25 0 0 0 chr2 206842408 206842433 -43845421 + GC_rich Low_complexity Low_complexity 1 25 0 763 314 57 4 chr2 206842707 206842936 -43844918 + MIR SINE MIR 2 242 -20 295 277 69 119 chr2 206842945 206843147 -43844707 - L2 LINE L2 0 3313 3122 882 240 86 48 chr2 206843577 206843914 -43843940 - MLT1H LTR MaLR -199 350 1 417 295 16 47 chr2 206843914 206844168 -43843686 + L1ME3A LINE L1 5698 5943 -227 420 292 92 55 chr2 206845578 206845903 -43841951 + L2 LINE L2 2517 2853 -461 884 283 122 36 chr2 206845910 206846568 -43841286 - HAL1 LINE L1 0 2507 1794 265 306 28 0 chr2 206846542 206846614 -43841240 - HAL1 LINE L1 -2426 81 8 * 295 305 102 0 chr2 206846650 206846778 -43841076 + L2 LINE L2 2924 3064 -208 269 236 44 77 chr2 206847355 206847538 -43840316 - MLT1E LTR MaLR -386 169 1 1711 204 15 6 chr2 206847673 206848011 -43839843 - MER58B DNA MER1_type 0 341 1 386 275 128 0 chr2 206848013 206848122 -43839732 + L2 LINE L2 3150 3272 0 214 285 110 84 chr2 206848539 206849065 -43838789 + L2 LINE L2 2294 2833 -481 1598 253 43 43 chr2 206849096 206849605 -43838249 + MLT1J LTR MaLR 2 510 -1 184 342 0 97 chr2 206851961 206852075 -43835779 + L2 LINE L2 2953 3055 -217 25 31 0 0 chr2 206852400 206852432 -43835422 + AT_rich Low_complexity Low_complexity 1 32 0 1464 173 28 8 chr2 206852432 206852687 -43835167 - AluJo SINE Alu -16 296 37 716 95 0 0 chr2 206852722 206852817 -43835037 + AluSq SINE Alu 1 95 -217 1436 102 9 51 chr2 206852904 206853120 -43834734 + AluSq SINE Alu 93 299 -14 3268 212 63 19 chr2 206853126 206854071 -43833783 + L1MC4 LINE L1 7056 8042 0 317 325 100 0 chr2 206854174 206854334 -43833520 + L2 LINE L2 1819 1994 -1320 452 357 90 39 chr2 206854353 206854765 -43833089 + L2 LINE L2 2833 3265 -7 204 67 0 0 chr2 206854884 206854914 -43832940 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 618 239 37 23 chr2 206856024 206856364 -43831490 + L1M4 LINE L1 5069 5418 -743 251 225 28 28 chr2 206856803 206856874 -43830980 - L2 LINE L2 -1 3271 3201 6890 56 17 3 chr2 206857346 206858605 -43829249 + L1PA6 LINE L1 4883 6153 -1 537 283 92 22 chr2 206858882 206859187 -43828667 + MLT1I LTR MaLR 59 567 0 2112 145 3 0 chr2 206860051 206860362 -43827492 - AluSx SINE Alu 0 312 1 225 258 10 82 chr2 206861004 206861101 -43826753 - MIR SINE MIR 0 262 173 228 318 45 0 chr2 206861371 206861459 -43826395 + L2 LINE L2 3222 3313 0 1731 182 16 0 chr2 206862719 206863026 -43824828 + AluJo SINE Alu 1 312 0 858 268 58 56 chr2 206863120 206863582 -43824272 + LTR33 LTR ERVL 1 463 -58 834 38 0 19 chr2 206864645 206864750 -43823104 - L1PA8 LINE L1 -6 6166 6064 185 145 274 81 chr2 206865491 206865553 -43822301 + MIR SINE MIR 183 256 -6 369 273 58 22 chr2 206865590 206865729 -43822125 - L2 LINE L2 -42 3271 3128 219 178 41 14 chr2 206865858 206865931 -43821923 + (TA)n Simple_repeat Simple_repeat 1 75 0 360 330 53 75 chr2 206866677 206867032 -43820822 + L2 LINE L2 2816 3160 -112 1687 139 13 46 chr2 206867032 206867334 -43820520 - AluJo SINE Alu -20 292 1 360 330 53 75 chr2 206867334 206867445 -43820409 + L2 LINE L2 3160 3272 0 198 0 0 0 chr2 206868841 206868863 -43818991 + (A)n Simple_repeat Simple_repeat 1 22 0 256 340 69 2 chr2 206869411 206869541 -43818313 + MIR SINE MIR 18 152 -61 1948 114 33 4 chr2 206869613 206869886 -43817968 + AluSx SINE Alu 1 281 -31 748 278 64 55 chr2 206870289 206870764 -43817090 - MLT1J2 LTR MaLR -23 469 1 181 279 23 0 chr2 206870789 206870832 -43817022 - MIR3 SINE MIR -16 192 149 495 246 55 72 chr2 206870840 206870995 -43816859 + MER112 DNA MER1_type 13 164 -96 2234 95 7 0 chr2 206870995 206871290 -43816564 - AluSq SINE Alu -16 297 1 495 246 55 72 chr2 206871290 206871370 -43816484 + MER112 DNA MER1_type 164 244 -16 2458 86 0 0 chr2 206871697 206872000 -43815854 - AluSx SINE Alu -9 303 1 21 36 0 0 chr2 206872221 206872249 -43815605 + AT_rich Low_complexity Low_complexity 1 28 0 841 251 24 54 chr2 206872947 206873194 -43814660 + MIR SINE MIR 8 252 -10 1683 152 7 48 chr2 206873315 206873624 -43814230 - AluJo SINE Alu -16 296 1 2205 114 0 25 chr2 206873778 206874093 -43813761 + AluSx SINE Alu 1 307 -5 210 71 0 0 chr2 206874465 206874493 -43813361 + (T)n Simple_repeat Simple_repeat 1 28 0 1977 141 7 3 chr2 206875085 206875376 -43812478 + AluSx SINE Alu 1 292 -20 766 22 0 0 chr2 206875501 206875590 -43812264 - L1PA3 LINE L1 0 6155 6067 7024 21 5 0 chr2 206875590 206876652 -43811202 + L1PA3 LINE L1 4995 6059 -96 308 286 0 0 chr2 206877021 206877091 -43810763 + L2 LINE L2 3229 3298 -15 21 36 0 0 chr2 206877107 206877135 -43810719 + AT_rich Low_complexity Low_complexity 1 28 0 291 104 0 0 chr2 206877666 206877714 -43810140 + (CA)n Simple_repeat Simple_repeat 2 49 0 736 257 5 10 chr2 206878739 206878941 -43808913 + LTR16A1 LTR ERVL 257 457 0 344 260 26 4 chr2 206879004 206879102 -43808752 + MIR SINE MIR 22 104 -104 857 99 28 35 chr2 206879201 206879342 -43808512 - AluSg/x SINE Alu -5 307 168 508 318 95 11 chr2 206880132 206880311 -43807543 + MER91A DNA MER1_type 3 196 0 2064 164 0 0 chr2 206880811 206881123 -43806731 + AluSx SINE Alu 1 312 0 325 147 11 8 chr2 206883698 206883767 -43804087 - MLT2B2 LTR ERVL -344 70 1 21 0 0 0 chr2 206883772 206883793 -43804061 + AT_rich Low_complexity Low_complexity 1 21 0 202 387 58 7 chr2 206884818 206884955 -43802899 + L2 LINE L2 3112 3255 -17 1957 187 36 30 chr2 206885078 206885516 -43802338 + L1MA9 LINE L1 5834 6274 -38 21 0 0 0 chr2 206885525 206885546 -43802308 + AT_rich Low_complexity Low_complexity 1 21 0 460 310 38 43 chr2 206885962 206886407 -43801447 + L1M4 LINE L1 4695 5137 -1009 24 32 0 0 chr2 206886411 206886442 -43801412 + AT_rich Low_complexity Low_complexity 1 31 0 2250 126 100 3 chr2 206886554 206886934 -43800920 + MSTA LTR MaLR 12 428 0 9465 170 30 11 chr2 206886938 206888538 -43799316 + MSTA-int LTR MaLR 5 1634 -17 2338 158 89 0 chr2 206888540 206888933 -43798921 + MSTA LTR MaLR 1 428 0 2154 128 7 0 chr2 206888966 206889271 -43798583 + AluSx SINE Alu 2 308 -4 988 194 69 33 chr2 206889396 206889700 -43798154 + L1MC5 LINE L1 7630 7944 -17 22 56 0 0 chr2 206890201 206890237 -43797617 + AT_rich Low_complexity Low_complexity 1 36 0 215 152 0 22 chr2 206890446 206890492 -43797362 + A-rich Low_complexity Low_complexity 2 46 0 634 264 54 64 chr2 206890507 206891023 -43796831 + L1MEd LINE L1 784 1189 -4838 660 296 106 10 chr2 206891094 206891395 -43796459 - LTR16A LTR ERVL -119 331 2 1419 286 50 41 chr2 206891818 206892381 -43795473 - HERV16-B1 LTR ERVL -2081 2915 2348 818 180 52 23 chr2 206892441 206892613 -43795241 + MER58A DNA MER1_type 46 222 -2 937 296 116 26 chr2 206892621 206893201 -43794653 - HERV16-B1 LTR ERVL -3052 1944 1666 650 223 25 6 chr2 206893353 206893510 -43794344 - HERV16-B1 LTR ERVL -3574 1422 1263 3054 287 42 27 chr2 206893548 206894702 -43793152 - HERV16-B1 LTR ERVL -3824 1172 1 474 171 0 0 chr2 206895401 206895477 -43792377 - MADE1 DNA Mariner -4 76 1 334 331 110 46 chr2 206895578 206895968 -43791886 - L2 LINE L2 -575 2739 2325 21 36 0 0 chr2 206896027 206896055 -43791799 + AT_rich Low_complexity Low_complexity 1 28 0 235 246 127 92 chr2 206897136 206897278 -43790576 - MIR SINE MIR -26 236 90 1344 190 230 56 chr2 206897278 206897721 -43790133 - MLT2B1 LTR ERVL 0 520 1 204 296 83 46 chr2 206897987 206898095 -43789759 - L2 LINE L2 -8 3305 3194 633 213 8 24 chr2 206898163 206898290 -43789564 + FLAM_A SINE Alu 5 129 -4 315 356 58 27 chr2 206898612 206898800 -43789054 + MLT1K LTR MaLR 126 319 -269 779 43 0 87 chr2 206898827 206898964 -43788890 + L1PA8 LINE L1 6068 6172 0 224 226 21 97 chr2 206900049 206900142 -43787712 + L2 LINE L2 3208 3293 -20 202 397 0 0 chr2 206901277 206901350 -43786504 + MIR SINE MIR 30 102 -106 1811 193 66 23 chr2 206901366 206901760 -43786094 + MLT2D LTR ERVL 1 411 -3 25 31 0 0 chr2 206902585 206902617 -43785237 + AT_rich Low_complexity Low_complexity 1 32 0 989 188 117 25 chr2 206902702 206902942 -43784912 - L1ME3A LINE L1 -1 6169 5908 960 311 32 68 chr2 206902950 206903423 -43784431 + LTR16B LTR ERVL 5 460 -4 237 222 0 0 chr2 206903429 206903483 -43784371 - L1ME3A LINE L1 -271 5899 5846 435 267 151 23 chr2 206904064 206904236 -43783618 + MIR3 SINE MIR 10 203 -5 260 51 0 26 chr2 206904556 206904595 -43783259 + (CA)n Simple_repeat Simple_repeat 2 39 0 208 164 75 119 chr2 206906179 206906246 -43781608 - MIR SINE MIR -70 192 129 627 256 45 17 chr2 206906492 206906668 -43781186 - MER5A DNA MER1_type 0 189 9 1763 169 10 23 chr2 206907646 206907953 -43779901 - AluJo SINE Alu -9 303 1 204 40 0 0 chr2 206908020 206908045 -43779809 + (T)n Simple_repeat Simple_repeat 1 25 0 772 267 116 64 chr2 206908550 206908954 -43778900 - LTR33 LTR ERVL -8 513 89 1234 292 42 12 chr2 206909026 206909430 -43778424 + LTR16C LTR ERVL 71 486 -5 610 227 10 58 chr2 206909471 206909678 -43778176 + HAL1 LINE L1 2311 2507 0 2182 264 101 30 chr2 206910320 206911233 -43776621 + L1ME LINE L1 6 983 -5087 814 52 0 0 chr2 206911233 206911330 -43776524 + AluY SINE Alu 202 298 -13 1694 159 43 20 chr2 206911353 206911654 -43776200 + AluJb SINE Alu 1 308 -4 1764 282 107 24 chr2 206911655 206912668 -43775186 + L1ME LINE L1 1018 2114 -4147 823 245 43 40 chr2 206912671 206912880 -43774974 + L1M4 LINE L1 4877 5089 -1057 5765 70 10 1 chr2 206912880 206913591 -43774263 - L1PA13 LINE L1 -2 6161 5445 823 245 43 40 chr2 206913591 206913659 -43774195 + L1M4 LINE L1 5089 5155 -991 491 272 72 34 chr2 206913741 206913976 -43773878 - LTR33 LTR ERVL -184 337 94 2148 127 0 3 chr2 206914623 206914923 -43772931 - AluSx SINE Alu -13 299 1 516 319 119 45 chr2 206915079 206915458 -43772396 - MLT1K LTR MaLR -61 527 121 1739 159 30 0 chr2 206915834 206916104 -43771750 + AluJb SINE Alu 1 278 -34 2042 82 20 94 chr2 206916771 206917113 -43770741 + AluYb8 SINE Alu 1 317 -1 2956 203 41 50 chr2 206917207 206918556 -43769298 + L1ME1 LINE L1 4895 6178 0 500 316 100 29 chr2 206918726 206919137 -43768717 - L2 LINE L2 -1004 2310 1871 304 178 139 40 chr2 206920111 206920212 -43767642 - MLT1J LTR MaLR -45 466 356 385 130 0 26 chr2 206920254 206920331 -43767523 + (TTCC)n Simple_repeat Simple_repeat 2 76 0 1299 180 184 8 chr2 206920331 206920586 -43767268 - AluJb SINE Alu -2 300 1 441 244 55 104 chr2 206920608 206920882 -43766972 - MLT1J LTR MaLR -202 309 7 22 35 0 0 chr2 206921678 206921707 -43766147 + AT_rich Low_complexity Low_complexity 1 29 0 642 134 116 0 chr2 206921718 206921830 -43766024 - MER63 DNA MER1_type -311 751 1 207 69 0 0 chr2 206921867 206921896 -43765958 + (CA)n Simple_repeat Simple_repeat 1 29 0 880 289 39 0 chr2 206922619 206922851 -43765003 + MIR SINE MIR 21 261 -1 301 258 220 8 chr2 206922886 206923018 -43764836 - MIR SINE MIR -32 230 71 518 261 103 46 chr2 206923079 206923340 -43764514 - L3b LINE CR1 -149 1434 1159 237 305 181 9 chr2 206923712 206923817 -43764037 - L2 LINE L2 -18 3254 3132 1757 161 52 89 chr2 206923989 206924392 -43763462 + MLT1B LTR MaLR 1 388 -2 2374 149 58 2 chr2 206924850 206925278 -43762576 - Tigger2 DNA MER2_type 0 2718 2267 495 132 0 0 chr2 206925263 206925331 -43762523 - Tigger2 DNA MER2_type -2650 68 1 * 1017 305 67 27 chr2 206926105 206926737 -43761117 - L1MC4a LINE L1 -1897 5911 5255 21 0 0 0 chr2 206926967 206926988 -43760866 + AT_rich Low_complexity Low_complexity 1 21 0 988 231 82 12 chr2 206927258 206927310 -43760544 - MLT1J2 LTR MaLR -140 310 263 1435 181 9 0 chr2 206927310 206927531 -43760323 + MER58A DNA MER1_type 2 224 0 988 231 82 12 chr2 206927531 206927733 -43760121 - MLT1J2 LTR MaLR -187 263 38 1347 269 34 13 chr2 206927801 206928184 -43759670 - MLT1I LTR MaLR -9 400 10 789 260 39 10 chr2 206929888 206929984 -43757870 + MIR SINE MIR 23 115 -147 1600 180 10 35 chr2 206929984 206930295 -43757559 - AluJb SINE Alu -9 303 1 789 260 39 10 chr2 206930295 206930402 -43757452 + MIR SINE MIR 115 232 -30 288 0 0 0 chr2 206930783 206930815 -43757039 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 32 103 0 0 chr2 206931736 206931852 -43756002 + GC_rich Low_complexity Low_complexity 1 116 0 23 33 0 0 chr2 206932918 206932948 -43754906 + AT_rich Low_complexity Low_complexity 1 30 0 210 37 0 0 chr2 206933581 206933608 -43754246 + (CA)n Simple_repeat Simple_repeat 2 28 0 329 256 0 12 chr2 206936083 206936169 -43751685 + L2 LINE L2 3178 3262 -10 327 309 135 39 chr2 206937326 206937504 -43750350 + L3 LINE CR1 1268 1462 -115 * 469 259 153 26 chr2 206937490 206937679 -43750175 - MIR SINE MIR -10 252 40 371 301 174 5 chr2 206937901 206938080 -43749774 - MIR SINE MIR -28 180 1 586 310 189 37 chr2 206938464 206939559 -43748295 + L2 LINE L2 1563 2823 -491 1278 167 39 8 chr2 206939683 206939940 -43747914 + MER33 DNA MER1_type 5 269 -55 363 182 15 0 chr2 206939981 206940047 -43747807 + MER33 DNA MER1_type 297 363 0 186 326 0 0 chr2 206940496 206940542 -43747312 + MIR SINE MIR 58 103 -105 1509 83 4 57 chr2 206940774 206941003 -43746851 + AluY SINE Alu 86 302 -9 481 294 64 30 chr2 206942153 206942370 -43745484 + MIR SINE MIR 5 224 -38 211 212 76 76 chr2 206943749 206943815 -43744039 - L3 LINE CR1 -47 1530 1465 1464 290 87 49 chr2 206943972 206944241 -43743613 - L3 LINE CR1 -195 1382 1125 2313 112 3 0 chr2 206944241 206944545 -43743309 + AluSx SINE Alu 1 305 -7 1464 290 87 49 chr2 206944545 206945034 -43742820 - L3 LINE CR1 -452 1125 595 430 181 118 8 chr2 206945963 206946090 -43741764 - L1ME4a LINE L1 -7 6114 5974 221 235 0 0 chr2 206946091 206946142 -43741712 + (TG)n Simple_repeat Simple_repeat 2 52 0 709 290 68 16 chr2 206946187 206946435 -43741419 + MIR SINE MIR 2 262 0 384 199 46 15 chr2 206946437 206946568 -43741286 - L1ME4a LINE L1 -217 5904 5770 523 262 83 35 chr2 206946698 206946927 -43740927 - MIR SINE MIR -3 259 20 259 338 78 35 chr2 206948130 206948272 -43739582 + MIR SINE MIR 49 196 -66 210 254 0 17 chr2 206949467 206949526 -43738328 - L2 LINE L2 -1 3271 3214 2199 120 3 0 chr2 206950330 206950631 -43737223 - AluSx SINE Alu -10 302 1 406 258 143 38 chr2 206950884 206951093 -43736761 - MIR SINE MIR -12 250 20 657 224 9 0 chr2 206951112 206951228 -43736626 - FAM SINE Alu -68 117 1 441 246 42 14 chr2 206951286 206951428 -43736426 - L1ME4a LINE L1 -6 6115 5970 325 225 99 134 chr2 206951436 206951578 -43736276 + MARNA DNA Mariner 67 203 -383 2048 111 0 60 chr2 206951685 206952000 -43735854 - AluSx SINE Alu -16 296 1 2278 106 0 0 chr2 206952075 206952368 -43735486 + AluSx SINE Alu 1 293 -19 231 88 0 0 chr2 206952814 206952848 -43735006 + (CA)n Simple_repeat Simple_repeat 1 34 0 184 255 128 0 chr2 206953276 206953323 -43734531 + L2 LINE L2 3219 3271 -1 384 273 68 50 chr2 206953374 206953535 -43734319 - MIR3 SINE MIR -15 193 30 544 261 70 35 chr2 206953881 206954080 -43733774 + MIR SINE MIR 57 262 0 795 254 34 14 chr2 206954092 206954301 -43733553 - MIR SINE MIR -27 235 23 234 188 0 21 chr2 206954782 206954830 -43733024 + MIR SINE MIR 8 54 -208 558 284 50 20 chr2 206954929 206955130 -43732724 + MIR SINE MIR 2 208 -54 675 249 35 46 chr2 206956508 206956752 -43731102 + MIR SINE MIR 21 259 -3 269 89 22 0 chr2 206957107 206957152 -43730702 + (GA)n Simple_repeat Simple_repeat 1 46 0 1709 174 0 17 chr2 206957196 206957494 -43730360 - AluJo SINE Alu -19 293 1 21 36 0 0 chr2 206957678 206957706 -43730148 + AT_rich Low_complexity Low_complexity 1 28 0 237 65 0 0 chr2 206957720 206957751 -43730103 + (TG)n Simple_repeat Simple_repeat 2 32 0 638 210 44 14 chr2 206957799 206957945 -43729909 + L1ME3A LINE L1 5742 5892 -278 1685 174 13 32 chr2 206957945 206958261 -43729593 + AluJb SINE Alu 1 310 -2 638 210 44 14 chr2 206958261 206958277 -43729577 + L1ME3A LINE L1 5892 5906 -264 441 175 19 0 chr2 206958311 206958414 -43729440 - L1MA4A LINE L1 -1 6302 6198 31 0 0 0 chr2 206958420 206958451 -43729403 + AT_rich Low_complexity Low_complexity 1 31 0 7986 31 0 10 chr2 206958451 206960098 -43727756 - L1PA4 LINE L1 -2 6153 4516 935 100 0 8 chr2 206960224 206960354 -43727500 + AluY SINE Alu 181 309 -2 1474 264 121 20 chr2 206960649 206961262 -43726592 + Charlie7 DNA MER1_type 2 676 -1936 270 153 0 28 chr2 206961302 206961374 -43726480 + Charlie7 DNA MER1_type 2476 2545 -67 292 317 24 0 chr2 206962809 206962891 -43724963 + L2 LINE L2 3184 3267 -5 2071 144 0 0 chr2 206962974 206963272 -43724582 - AluJb SINE Alu -14 298 1 851 232 3 116 chr2 206965982 206966266 -43721588 - MIR SINE MIR -8 254 3 317 221 81 12 chr2 206966288 206966374 -43721480 + MIR SINE MIR 106 197 -65 2204 88 10 3 chr2 206966639 206966934 -43720920 - AluY SINE Alu -14 297 1 23 54 0 0 chr2 206967891 206967928 -43719926 + AT_rich Low_complexity Low_complexity 1 37 0 559 273 105 45 chr2 206968446 206968827 -43719027 + L1ME4a LINE L1 5541 5944 -177 51 0 0 0 chr2 206968983 206969034 -43718820 + AT_rich Low_complexity Low_complexity 1 51 0 6110 127 12 4 chr2 206969034 206970257 -43717597 - L1PA14 LINE L1 -20 6141 4912 373 390 10 34 chr2 206971171 206971376 -43716478 + MIR3 SINE MIR 7 206 -2 411 252 44 37 chr2 206972120 206972255 -43715599 + MLT1J LTR MaLR 7 142 -369 363 294 128 42 chr2 206972307 206972596 -43715258 - MLT1K LTR MaLR -159 429 116 247 324 206 14 chr2 206973536 206973755 -43714099 + MIR SINE MIR 2 262 0 273 278 130 0 chr2 206974187 206974295 -43713559 - MIR3 SINE MIR -18 190 69 1989 152 0 7 chr2 206974299 206974595 -43713259 + AluSx SINE Alu 1 294 -18 291 311 99 36 chr2 206974802 206975104 -43712750 - HAL1 LINE L1 -1796 711 391 263 291 45 77 chr2 206975120 206975367 -43712487 - HAL1 LINE L1 -2226 281 43 29 0 0 0 chr2 206975407 206975436 -43712418 + AT_rich Low_complexity Low_complexity 1 29 0 1916 126 13 38 chr2 206975463 206975780 -43712074 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 206976425 206976446 -43711408 + AT_rich Low_complexity Low_complexity 1 21 0 531 0 0 0 chr2 206977259 206977318 -43710536 + (TA)n Simple_repeat Simple_repeat 1 59 0 2199 122 3 0 chr2 206979272 206979568 -43708286 + AluSx SINE Alu 1 297 -15 1882 137 175 18 chr2 206981658 206982000 -43705854 - MSTD LTR MaLR 0 396 1 1721 144 20 40 chr2 206983652 206983950 -43703904 + AluJo SINE Alu 1 292 -20 247 171 239 45 chr2 206984871 206984959 -43702895 + Charlie7 DNA MER1_type 1 105 -2507 * 377 209 65 13 chr2 206984942 206985095 -43702759 + Charlie7 DNA MER1_type 2436 2596 -16 180 111 0 0 chr2 206985880 206985907 -43701947 + (CAGAA)n Simple_repeat Simple_repeat 2 28 0 348 77 0 0 chr2 206985910 206985962 -43701892 + (TG)n Simple_repeat Simple_repeat 1 52 0 254 231 0 0 chr2 206986027 206986079 -43701775 + (CA)n Simple_repeat Simple_repeat 2 53 0 290 330 58 58 chr2 206986295 206986519 -43701335 - L3b LINE CR1 -24 1559 1336 1699 171 3 27 chr2 206986901 206987199 -43700655 + AluJo SINE Alu 1 291 -21 861 272 158 9 chr2 206987261 206987633 -43700221 - MLT1J LTR MaLR -22 467 24 21 36 0 0 chr2 206988126 206988154 -43699700 + AT_rich Low_complexity Low_complexity 1 28 0 443 177 13 0 chr2 206988876 206988955 -43698899 + MER106B DNA MER1_type 1 80 -979 1251 179 157 8 chr2 206988964 206989226 -43698628 + MLT1D LTR MaLR 198 498 -7 182 376 46 0 chr2 206989231 206989340 -43698514 + MIR SINE MIR 123 236 -26 251 104 21 0 chr2 206989850 206989898 -43697956 + (TTTTG)n Simple_repeat Simple_repeat 4 52 0 200 290 89 24 chr2 206990086 206990210 -43697644 - MIR SINE MIR -6 256 125 456 292 24 105 chr2 206990578 206990910 -43696944 + L2 LINE L2 2966 3270 -2 423 306 32 25 chr2 206990917 206991074 -43696780 + MIR3 SINE MIR 45 202 -6 192 261 22 0 chr2 206993508 206993554 -43694300 - L2 LINE L2 -4 3309 3263 186 268 18 36 chr2 206993762 206993818 -43694036 + L2 LINE L2 3202 3256 -16 2077 129 0 0 chr2 206994085 206994392 -43693462 - AluSx SINE Alu 0 314 8 23 54 0 0 chr2 206994561 206994598 -43693256 + AT_rich Low_complexity Low_complexity 1 37 0 537 344 77 29 chr2 206995153 206995502 -43692352 + L3 LINE CR1 301 666 -911 837 242 52 24 chr2 206995527 206995738 -43692116 - MIR SINE MIR -3 259 43 744 301 61 31 chr2 206995756 206996082 -43691772 + L3 LINE CR1 669 1004 -573 229 179 0 0 chr2 206996200 206996239 -43691615 + MIR3 SINE MIR 167 205 -3 195 340 152 11 chr2 206996292 206996483 -43691371 + L3 LINE CR1 1276 1493 -84 423 277 92 21 chr2 206997148 206997289 -43690565 - L3 LINE CR1 -12 1565 1415 438 279 97 6 chr2 206997636 206997801 -43690053 + MIR SINE MIR 12 191 -71 499 181 0 76 chr2 206997831 206997936 -43689918 + L2 LINE L2 3217 3313 0 665 114 0 0 chr2 206998116 206998204 -43689650 + HY4 scRNA scRNA 2 89 -4 207 69 0 0 chr2 206998211 206998240 -43689614 + (A)n Simple_repeat Simple_repeat 1 29 0 2045 138 0 3 chr2 207000570 207000866 -43686988 - AluJb SINE Alu -17 295 1 233 316 137 0 chr2 207001860 207001977 -43685877 + MIR SINE MIR 38 170 -92 844 205 42 0 chr2 207002010 207002200 -43685654 - MIR SINE MIR -11 251 54 734 261 17 47 chr2 207004125 207004359 -43683495 + MIR SINE MIR 25 251 -11 220 313 75 0 chr2 207004363 207004430 -43683424 + L2 LINE L2 3193 3264 -8 1797 132 7 64 chr2 207007019 207007315 -43680539 - AluSx SINE Alu -33 279 1 867 222 36 27 chr2 207007569 207007794 -43680060 + MIR SINE MIR 36 262 0 726 194 31 47 chr2 207007952 207008143 -43679711 - MER5A DNA MER1_type -1 188 1 1385 194 15 0 chr2 207008151 207008424 -43679430 - MER33 DNA MER1_type 0 324 48 2292 71 4 0 chr2 207009277 207009592 -43678262 - AluY SINE Alu 0 316 1 2450 54 3 3 chr2 207010638 207010932 -43676922 - AluY SINE Alu -17 294 1 23 68 0 0 chr2 207011274 207011318 -43676536 + AT_rich Low_complexity Low_complexity 1 44 0 526 120 13 0 chr2 207012126 207012201 -43675653 + MADE1 DNA Mariner 1 76 -4 201 227 91 15 chr2 207013152 207013218 -43674636 - L2 LINE L2 -229 3084 3014 1744 150 4 4 chr2 207013231 207013497 -43674357 + AluJo SINE Alu 1 266 -46 820 258 103 9 chr2 207014376 207014609 -43673245 - MIR SINE MIR 0 262 8 219 322 91 8 chr2 207014893 207015014 -43672840 - MIR3 SINE MIR -35 173 43 216 242 113 32 chr2 207015051 207015113 -43672741 + L2 LINE L2 3144 3210 -62 977 312 61 28 chr2 207015202 207015631 -43672223 - L2 LINE L2 -42 3271 2829 1956 173 41 65 chr2 207015686 207015821 -43672033 + Charlie4a DNA MER1_type 26 163 -1798 1870 159 7 3 chr2 207015821 207016123 -43671731 + AluSx SINE Alu 1 303 -9 1956 173 41 65 chr2 207016123 207016479 -43671375 + Charlie4a DNA MER1_type 163 505 -3 318 267 35 0 chr2 207016500 207016586 -43671268 - L2 LINE L2 -542 2772 2684 292 310 26 43 chr2 207016644 207016760 -43671094 - MIR SINE MIR -129 133 20 855 232 3 116 chr2 207069196 207069480 -43618374 - MIR SINE MIR -8 254 3 337 316 52 35 chr2 207069480 207069588 -43618266 + MIR SINE MIR 87 197 -65 2267 84 7 3 chr2 207069853 207070149 -43617705 - AluY SINE Alu -14 297 1 23 54 0 0 chr2 207071106 207071143 -43616711 + AT_rich Low_complexity Low_complexity 1 37 0 440 268 105 46 chr2 207071660 207071985 -43615869 + L1ME4a LINE L1 5541 5884 -237 51 0 0 0 chr2 207072197 207072248 -43615606 + AT_rich Low_complexity Low_complexity 1 51 0 1991 139 12 6 chr2 207072248 207072580 -43615274 - L1PA13 LINE L1 -22 6141 5808 851 205 42 0 chr2 207074486 207074676 -43613178 + MIR SINE MIR 54 251 -11 234 296 138 8 chr2 207074709 207074833 -43613021 - MIR3 SINE MIR -54 154 32 1997 142 0 3 chr2 207075820 207076109 -43611745 + AluJb SINE Alu 1 288 -24 231 88 0 0 chr2 207077401 207077435 -43610419 + (CA)n Simple_repeat Simple_repeat 1 34 0 183 298 0 18 chr2 207077853 207077910 -43609944 + L2 LINE L2 3216 3271 -1 385 267 68 50 chr2 207077961 207078122 -43609732 - MIR3 SINE MIR -15 193 30 547 261 70 35 chr2 207078468 207078667 -43609187 + MIR SINE MIR 57 262 0 802 254 34 14 chr2 207078679 207078888 -43608966 - MIR SINE MIR -27 235 23 232 188 0 21 chr2 207079369 207079417 -43608437 + MIR SINE MIR 8 54 -208 534 282 45 20 chr2 207079516 207079718 -43608136 + MIR SINE MIR 2 208 -54 685 274 33 46 chr2 207081100 207081341 -43606513 + MIR SINE MIR 22 259 -3 269 89 22 0 chr2 207081700 207081745 -43606109 + (GA)n Simple_repeat Simple_repeat 1 46 0 1726 174 0 17 chr2 207081789 207082087 -43605767 - AluJo SINE Alu -19 293 1 21 36 0 0 chr2 207082271 207082299 -43605555 + AT_rich Low_complexity Low_complexity 1 28 0 237 65 0 0 chr2 207082313 207082344 -43605510 + (TG)n Simple_repeat Simple_repeat 2 32 0 570 210 44 14 chr2 207082392 207082538 -43605316 + L1ME3A LINE L1 5742 5892 -278 1659 186 3 25 chr2 207082538 207082855 -43604999 + AluJb SINE Alu 1 310 -2 570 210 44 14 chr2 207082855 207082871 -43604983 + L1ME3A LINE L1 5892 5906 -264 386 168 20 0 chr2 207082907 207083008 -43604846 - L1MA4A LINE L1 -3 6300 6198 31 0 0 0 chr2 207083014 207083045 -43604809 + AT_rich Low_complexity Low_complexity 1 31 0 7504 30 0 10 chr2 207083045 207084692 -43603162 - L1PA4 LINE L1 -2 6153 4516 938 100 0 8 chr2 207084818 207084948 -43602906 + AluY SINE Alu 181 309 -2 1214 269 119 18 chr2 207085243 207085856 -43601998 + Charlie7 DNA MER1_type 2 676 -1936 232 143 0 29 chr2 207085896 207085966 -43601888 + Charlie7 DNA MER1_type 2476 2543 -69 298 317 24 0 chr2 207087403 207087485 -43600369 + L2 LINE L2 3184 3267 -5 2081 144 0 0 chr2 207087568 207087866 -43599988 - AluJb SINE Alu -14 298 1 2096 169 19 13 chr2 207088444 207088895 -43598959 - L1P LINE L1 -795 5361 4912 387 390 10 34 chr2 207089809 207090014 -43597840 + MIR3 SINE MIR 7 206 -2 359 252 44 37 chr2 207090758 207090893 -43596961 + MLT1J LTR MaLR 7 142 -369 288 294 129 43 chr2 207090955 207091234 -43596620 - MLT1K LTR MaLR -170 418 116 246 324 206 14 chr2 207092174 207092393 -43595461 + MIR SINE MIR 2 262 0 273 278 130 0 chr2 207092825 207092933 -43594921 - MIR3 SINE MIR -18 190 69 1959 159 0 7 chr2 207092937 207093233 -43594621 + AluSx SINE Alu 1 294 -18 528 330 88 26 chr2 207093440 207093746 -43594108 - HAL1 LINE L1 -1796 711 387 454 291 45 77 chr2 207093758 207094005 -43593849 - HAL1 LINE L1 -2226 281 43 29 0 0 0 chr2 207094045 207094074 -43593780 + AT_rich Low_complexity Low_complexity 1 29 0 1922 126 13 38 chr2 207094101 207094418 -43593436 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 207095064 207095085 -43592769 + AT_rich Low_complexity Low_complexity 1 21 0 495 0 0 0 chr2 207095896 207095951 -43591903 + (TA)n Simple_repeat Simple_repeat 1 55 0 2208 122 3 0 chr2 207097904 207098200 -43589654 + AluSx SINE Alu 1 297 -15 608 319 162 30 chr2 207100547 207101455 -43586399 + L2 LINE L2 1853 2880 -434 1149 167 39 8 chr2 207101521 207101778 -43586076 + MER33 DNA MER1_type 5 269 -55 328 182 15 0 chr2 207101819 207101885 -43585969 + MER33 DNA MER1_type 297 363 0 187 321 19 0 chr2 207102327 207102380 -43585474 + MIR SINE MIR 50 103 -105 1502 83 4 57 chr2 207102612 207102841 -43585013 + AluY SINE Alu 86 302 -9 492 294 64 30 chr2 207103989 207104206 -43583648 + MIR SINE MIR 5 224 -38 212 212 76 76 chr2 207105585 207105651 -43582203 - L3 LINE CR1 -47 1530 1465 1501 290 87 49 chr2 207105808 207106077 -43581777 - L3 LINE CR1 -195 1382 1125 2325 112 3 0 chr2 207106077 207106381 -43581473 + AluSx SINE Alu 1 305 -7 1501 290 87 49 chr2 207106381 207106870 -43580984 - L3 LINE CR1 -452 1125 595 367 197 118 8 chr2 207107799 207107926 -43579928 - L1ME4a LINE L1 -7 6114 5974 221 235 0 0 chr2 207107927 207107978 -43579876 + (TG)n Simple_repeat Simple_repeat 2 52 0 731 290 68 16 chr2 207108023 207108271 -43579583 + MIR SINE MIR 2 262 0 324 199 46 15 chr2 207108273 207108404 -43579450 - L1ME4a LINE L1 -217 5904 5770 545 262 83 35 chr2 207108534 207108763 -43579091 - MIR SINE MIR -3 259 20 262 373 47 6 chr2 207109940 207110109 -43577745 + MIR SINE MIR 21 196 -66 208 254 0 17 chr2 207111306 207111365 -43576489 - L2 LINE L2 -1 3271 3214 2205 120 3 0 chr2 207112169 207112470 -43575384 - AluSx SINE Alu -10 302 1 418 93 0 0 chr2 207112720 207112803 -43575051 + Alu SINE Alu 229 311 0 187 268 18 36 chr2 207113070 207113126 -43574728 - L2 LINE L2 -16 3256 3202 192 261 22 0 chr2 207113334 207113380 -43574474 + L2 LINE L2 3263 3309 -4 436 306 32 25 chr2 207115814 207115971 -43571883 - MIR3 SINE MIR -6 202 45 484 292 21 102 chr2 207115978 207116310 -43571544 - L2 LINE L2 -2 3270 2966 210 290 89 24 chr2 207116678 207116802 -43571052 + MIR SINE MIR 125 256 -6 251 104 21 0 chr2 207116990 207117038 -43570816 + (CAAAA)n Simple_repeat Simple_repeat 4 52 0 191 376 46 0 chr2 207117548 207117657 -43570197 - MIR SINE MIR -26 236 123 1141 179 157 8 chr2 207117662 207117924 -43569930 - MLT1D LTR MaLR -7 498 198 417 162 0 0 chr2 207117944 207118012 -43569842 - MER106A DNA MER1_type -168 68 1 21 36 0 0 chr2 207118734 207118762 -43569092 + AT_rich Low_complexity Low_complexity 1 28 0 730 283 111 34 chr2 207119255 207119615 -43568239 + MLT1J LTR MaLR 24 467 -44 1721 171 3 27 chr2 207119689 207119987 -43567867 - AluJo SINE Alu -21 291 1 309 341 92 48 chr2 207120320 207120593 -43567261 + L3b LINE CR1 1275 1559 -24 183 204 0 0 chr2 207120809 207120858 -43566996 + (TG)n Simple_repeat Simple_repeat 1 49 0 369 58 0 0 chr2 207120926 207120978 -43566876 + (CA)n Simple_repeat Simple_repeat 1 52 0 180 111 0 0 chr2 207120981 207121008 -43566846 + (TTCTG)n Simple_repeat Simple_repeat 2 28 0 285 180 66 16 chr2 207121824 207121946 -43565908 - Charlie7 DNA MER1_type -49 2563 2436 1738 144 20 40 chr2 207122938 207123236 -43564618 - AluJo SINE Alu -20 292 1 610 90 140 0 chr2 207124881 207124981 -43562873 + MSTD LTR MaLR 1 114 -282 564 307 58 58 chr2 207125194 207125640 -43562214 + LTR33 LTR ERVL 18 463 -58 834 38 0 19 chr2 207126702 207126807 -43561047 - L1PA8 LINE L1 -6 6166 6064 185 145 274 81 chr2 207127548 207127610 -43560244 + MIR SINE MIR 183 256 -6 369 273 58 22 chr2 207127647 207127786 -43560068 - L2 LINE L2 -42 3271 3128 245 181 28 14 chr2 207127915 207127987 -43559867 + (TA)n Simple_repeat Simple_repeat 2 74 0 360 330 53 75 chr2 207128733 207129088 -43558766 + L2 LINE L2 2816 3160 -112 1687 139 13 46 chr2 207129088 207129390 -43558464 - AluJo SINE Alu -20 292 1 360 330 53 75 chr2 207129390 207129501 -43558353 + L2 LINE L2 3160 3272 0 198 0 0 0 chr2 207130899 207130921 -43556933 + (A)n Simple_repeat Simple_repeat 1 22 0 250 329 108 1 chr2 207131469 207131599 -43556255 + MIR SINE MIR 18 152 -61 1904 116 36 4 chr2 207131671 207131946 -43555908 + AluSx SINE Alu 1 284 -28 623 287 60 50 chr2 207132346 207132821 -43555033 - MLT1J2 LTR MaLR -23 461 1 183 279 23 0 chr2 207132846 207132889 -43554965 - MIR3 SINE MIR -16 192 149 333 252 66 33 chr2 207132897 207133048 -43554806 + MER112 DNA MER1_type 13 168 -92 1952 125 11 3 chr2 207133052 207133339 -43554515 - AluSx SINE Alu -16 296 8 23 54 0 0 chr2 207133508 207133545 -43554309 + AT_rich Low_complexity Low_complexity 1 37 0 565 341 77 29 chr2 207134101 207134450 -43553404 + L3 LINE CR1 301 666 -911 855 242 52 24 chr2 207134475 207134686 -43553168 - MIR SINE MIR -3 259 43 765 301 61 31 chr2 207134704 207135030 -43552824 + L3 LINE CR1 669 1004 -573 230 179 0 0 chr2 207135148 207135187 -43552667 + MIR3 SINE MIR 167 205 -3 203 340 152 11 chr2 207135240 207135431 -43552423 + L3 LINE CR1 1276 1493 -84 419 277 92 21 chr2 207136096 207136237 -43551617 - L3 LINE CR1 -12 1565 1415 442 279 97 6 chr2 207136584 207136749 -43551105 + MIR SINE MIR 12 191 -71 493 181 0 76 chr2 207136779 207136884 -43550970 + L2 LINE L2 3217 3313 0 619 114 0 0 chr2 207137064 207137152 -43550702 + HY4 scRNA scRNA 2 89 -4 207 69 0 0 chr2 207137159 207137188 -43550666 + (A)n Simple_repeat Simple_repeat 1 29 0 26 30 0 0 chr2 207138917 207138950 -43548904 + AT_rich Low_complexity Low_complexity 1 33 0 927 219 101 0 chr2 207138953 207139172 -43548682 - MIR SINE MIR -21 241 1 274 330 36 9 chr2 207140817 207140929 -43546925 + L2 LINE L2 3191 3305 -8 186 191 29 15 chr2 207141620 207141688 -43546166 + CT-rich Low_complexity Low_complexity 4 72 0 696 278 129 35 chr2 207141720 207142177 -43545677 - LTR33 LTR ERVL -19 502 3 306 0 0 0 chr2 207142481 207142515 -43545339 + (CA)n Simple_repeat Simple_repeat 2 35 0 456 327 65 30 chr2 207143774 207143973 -43543881 + MIR SINE MIR 51 256 -6 315 346 161 28 chr2 207144056 207144273 -43543581 - L3 LINE CR1 -5 1572 1327 184 342 80 46 chr2 207144948 207145211 -43542643 - L2 LINE L2 -696 2618 2347 361 247 41 62 chr2 207145417 207145611 -43542243 + L2 LINE L2 3124 3313 0 1013 201 26 79 chr2 207145970 207146273 -43541581 - MLT1G LTR MaLR 0 590 304 343 281 96 14 chr2 207146322 207146468 -43541386 + L1ME LINE L1 5485 5642 -479 2249 37 8 4 chr2 207146508 207146776 -43541078 + AluY SINE Alu 23 291 -20 882 240 86 48 chr2 207146920 207147257 -43540597 - MLT1G LTR MaLR -199 350 1 387 294 16 51 chr2 207147257 207147512 -43540342 + L1ME3A LINE L1 5698 5943 -227 420 292 92 55 chr2 207148922 207149247 -43538607 + L2 LINE L2 2517 2853 -461 25 31 0 0 chr2 207149952 207149984 -43537870 + AT_rich Low_complexity Low_complexity 1 32 0 885 189 108 19 chr2 207150097 207150309 -43537545 - L1ME3A LINE L1 -32 6138 5908 808 312 32 68 chr2 207150317 207150788 -43537066 + LTR16B LTR ERVL 5 458 -6 446 267 151 23 chr2 207151431 207151603 -43536251 + MIR3 SINE MIR 10 203 -5 239 77 0 26 chr2 207151923 207151962 -43535892 + (CA)n Simple_repeat Simple_repeat 2 39 0 633 256 45 17 chr2 207153864 207154040 -43533814 - MER5A DNA MER1_type 0 189 9 200 208 0 130 chr2 207154199 207154276 -43533578 - MER91B DNA MER1_type -123 67 1 1793 169 10 23 chr2 207155018 207155325 -43532529 - AluJo SINE Alu -9 303 1 204 40 0 0 chr2 207155392 207155417 -43532437 + (T)n Simple_repeat Simple_repeat 1 25 0 667 263 119 65 chr2 207155922 207156325 -43531529 - LTR33 LTR ERVL -8 513 89 1133 289 42 12 chr2 207156397 207156799 -43531055 + LTR16C LTR ERVL 71 484 -7 528 227 10 58 chr2 207156842 207157049 -43530805 + HAL1 LINE L1 2311 2507 0 1836 266 101 30 chr2 207157690 207158603 -43529251 + L1ME LINE L1 6 983 -5087 800 52 0 0 chr2 207158603 207158699 -43529155 + AluY SINE Alu 202 297 -14 1806 148 40 20 chr2 207158722 207159026 -43528828 + AluJb SINE Alu 1 310 -2 1177 293 105 23 chr2 207159030 207160046 -43527808 + L1ME LINE L1 1015 2114 -4147 688 260 20 0 chr2 207160049 207160253 -43527601 + L1M4 LINE L1 4877 5084 -1062 5367 73 10 0 chr2 207160258 207160968 -43526886 - L1PA13 LINE L1 -2 6161 5445 466 277 15 8 chr2 207161426 207161556 -43526298 - LTR33 LTR ERVL -297 224 94 2147 127 0 3 chr2 207162203 207162502 -43525352 - AluSx SINE Alu -14 298 1 404 319 119 45 chr2 207162658 207163037 -43524817 - MLT1K LTR MaLR -61 527 121 1751 161 29 0 chr2 207163413 207163687 -43524167 + AluJb SINE Alu 1 282 -30 1989 82 20 96 chr2 207164350 207164693 -43523161 + AluYb8 SINE Alu 1 317 -1 2613 201 39 50 chr2 207164814 207166133 -43521721 + L1ME1 LINE L1 4924 6175 -3 525 316 100 29 chr2 207166306 207166717 -43521137 - L2 LINE L2 -1004 2310 1871 263 178 139 40 chr2 207167692 207167793 -43520061 - MLT1J LTR MaLR -45 466 356 385 130 0 26 chr2 207167835 207167912 -43519942 + (TTCC)n Simple_repeat Simple_repeat 2 76 0 1168 180 184 12 chr2 207167912 207168168 -43519686 - AluJb SINE Alu -2 300 1 377 244 35 124 chr2 207168190 207168391 -43519463 - MLT1J LTR MaLR -202 309 127 22 35 0 0 chr2 207169260 207169289 -43518565 + AT_rich Low_complexity Low_complexity 1 29 0 587 134 116 0 chr2 207169300 207169412 -43518442 - MER63 DNA MER1_type -85 751 1 207 69 0 0 chr2 207169449 207169478 -43518376 + (CA)n Simple_repeat Simple_repeat 1 29 0 895 289 39 0 chr2 207170201 207170433 -43517421 + MIR SINE MIR 21 261 -1 306 258 220 8 chr2 207170468 207170600 -43517254 - MIR SINE MIR -32 230 71 522 261 103 46 chr2 207170661 207170922 -43516932 - L3b LINE CR1 -149 1434 1159 216 314 181 9 chr2 207171294 207171399 -43516455 - L2 LINE L2 -18 3254 3132 1581 161 52 89 chr2 207171571 207171974 -43515880 + MLT1B LTR MaLR 1 388 -2 229 261 46 0 chr2 207172429 207172494 -43515360 - Tigger2 DNA MER2_type 0 2718 2651 1631 193 66 23 chr2 207172893 207173287 -43514567 - MLT2D LTR ERVL -3 411 1 211 397 0 0 chr2 207173303 207173376 -43514478 - MIR SINE MIR -106 102 30 227 237 21 97 chr2 207174511 207174604 -43513250 - L2 LINE L2 -20 3293 3208 721 43 0 87 chr2 207175689 207175826 -43512028 - L1PA8 LINE L1 0 6172 6068 264 328 69 30 chr2 207175910 207176041 -43511813 - MLT1K LTR MaLR -327 261 126 576 203 8 25 chr2 207176372 207176490 -43511364 - FLAM_A SINE Alu -13 120 5 210 296 83 46 chr2 207176558 207176666 -43511188 + L2 LINE L2 3194 3305 -8 969 206 83 71 chr2 207176932 207177257 -43510597 + MLT2B1 LTR ERVL 1 329 -191 183 80 0 0 chr2 207177288 207177313 -43510541 + (TC)n Simple_repeat Simple_repeat 2 26 0 243 246 127 92 chr2 207177375 207177517 -43510337 + MIR SINE MIR 90 236 -26 21 36 0 0 chr2 207178598 207178626 -43509228 + AT_rich Low_complexity Low_complexity 1 28 0 362 328 110 46 chr2 207178685 207179075 -43508779 + L2 LINE L2 2325 2739 -575 436 171 0 0 chr2 207179176 207179252 -43508602 + MADE1 DNA Mariner 1 76 -4 2626 288 42 27 chr2 207179951 207181105 -43506749 + HERV16 LTR ERVL 1 1172 -3824 589 219 26 7 chr2 207181145 207181300 -43506554 + HERV16 LTR ERVL 1265 1422 -3574 835 284 125 30 chr2 207181467 207182032 -43505822 + HERV16 LTR ERVL 1682 2359 -3052 737 180 52 23 chr2 207182040 207182212 -43505642 - MER58A DNA MER1_type -2 222 46 1185 295 43 34 chr2 207182272 207182832 -43505022 + HERV16 LTR ERVL 2348 2912 -2084 2613 206 36 53 chr2 207183740 207184986 -43502868 + L1ME1 LINE L1 5004 6175 -3 525 316 100 29 chr2 207185159 207185570 -43502284 - L2 LINE L2 -1004 2310 1871 263 178 139 40 chr2 207186543 207186644 -43501210 - MLT1J LTR MaLR -45 466 356 377 121 0 15 chr2 207186686 207186752 -43501102 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 750 165 45 0 chr2 207186767 207186900 -43500954 - FRAM SINE Alu -16 160 22 269 236 44 77 chr2 207187294 207187477 -43500377 - MLT1E LTR MaLR -386 169 1 1711 204 15 6 chr2 207187612 207187950 -43499904 - MER58B DNA MER1_type 0 341 1 386 275 128 0 chr2 207187952 207188061 -43499793 + L2 LINE L2 3150 3272 0 230 285 106 85 chr2 207188478 207189007 -43498847 + L2 LINE L2 2294 2833 -481 1598 253 43 43 chr2 207189038 207189547 -43498307 + MLT1J LTR MaLR 2 510 -1 184 342 0 97 chr2 207191903 207192017 -43495837 + L2 LINE L2 2953 3055 -217 25 31 0 0 chr2 207192342 207192374 -43495480 + AT_rich Low_complexity Low_complexity 1 32 0 1464 173 28 8 chr2 207192374 207192629 -43495225 - AluJo SINE Alu -16 296 37 716 95 0 0 chr2 207192664 207192759 -43495095 + AluSq SINE Alu 1 95 -217 1418 102 9 51 chr2 207192846 207193062 -43494792 + AluSq SINE Alu 93 299 -14 3268 212 63 19 chr2 207193068 207194013 -43493841 + L1MC4 LINE L1 7056 8042 0 322 306 106 6 chr2 207194116 207194276 -43493578 + L2 LINE L2 1819 1994 -1320 452 357 90 39 chr2 207194295 207194707 -43493147 + L2 LINE L2 2833 3265 -7 204 67 0 0 chr2 207194826 207194856 -43492998 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 618 239 37 23 chr2 207195966 207196306 -43491548 + L1M4 LINE L1 5069 5418 -743 251 225 28 28 chr2 207196745 207196816 -43491038 - L2 LINE L2 -1 3271 3201 6890 56 17 3 chr2 207197288 207198547 -43489307 + L1PA6 LINE L1 4883 6153 -1 537 283 92 22 chr2 207198824 207199129 -43488725 + MLT1I LTR MaLR 59 567 0 2112 145 3 0 chr2 207199993 207200304 -43487550 - AluSx SINE Alu 0 312 1 225 258 10 82 chr2 207200946 207201043 -43486811 - MIR SINE MIR 0 262 173 228 318 45 0 chr2 207201313 207201401 -43486453 + L2 LINE L2 3222 3313 0 1731 182 16 0 chr2 207202661 207202968 -43484886 + AluJo SINE Alu 1 312 0 775 267 70 63 chr2 207203062 207203522 -43484332 + LTR33 LTR ERVL 1 463 -58 198 71 0 0 chr2 207203732 207203760 -43484094 + (G)n Simple_repeat Simple_repeat 1 28 0 333 194 0 0 chr2 207203888 207203955 -43483899 + MER63 DNA MER1_type 681 747 -89 21 0 0 0 chr2 207203971 207203992 -43483862 + AT_rich Low_complexity Low_complexity 1 21 0 377 244 35 124 chr2 207204868 207205069 -43482785 + MLT1J LTR MaLR 127 309 -202 451 162 0 0 chr2 207205091 207205159 -43482695 + AluJ/FLAM SINE Alu 1 68 -244 312 202 83 12 chr2 207205183 207205267 -43482587 + FRAM/FAM SINE Alu 1 85 -81 2080 152 0 0 chr2 207205665 207205975 -43481879 + AluJb SINE Alu 1 310 -2 274 360 35 0 chr2 207206097 207206211 -43481643 + L2 LINE L2 1315 1432 -1882 204 330 0 35 chr2 207206272 207206387 -43481467 + L2 LINE L2 1570 1680 -1634 781 157 5 9 chr2 207206397 207206613 -43481241 + (CA)n Simple_repeat Simple_repeat 1 215 0 297 196 54 54 chr2 207206793 207206885 -43480969 - LTR8 LTR ERV1 -598 93 2 1997 211 47 9 chr2 207206886 207207350 -43480504 - MER21B LTR ERV1 -284 579 98 417 217 0 22 chr2 207207404 207207496 -43480358 - MER21B LTR ERV1 -773 90 1 2916 187 34 38 chr2 207207849 207208263 -43479591 - LTR26E LTR ERV1 0 622 211 1614 169 0 100 chr2 207208263 207208594 -43479260 - AluJo SINE Alu -14 298 1 2916 187 34 38 chr2 207208594 207208804 -43479050 - LTR26E LTR ERV1 -411 211 1 317 292 48 48 chr2 207211503 207211671 -43476183 + MIR SINE MIR 48 215 -47 2209 229 21 30 chr2 207212132 207212799 -43475055 + L1ME3 LINE L1 4453 5113 -1033 27 0 0 0 chr2 207212897 207212924 -43474930 + AT_rich Low_complexity Low_complexity 1 27 0 332 273 11 45 chr2 207212934 207213110 -43474744 + (CATA)n Simple_repeat Simple_repeat 3 172 0 24 0 0 0 chr2 207213110 207213134 -43474720 + AT_rich Low_complexity Low_complexity 1 24 0 2134 135 0 0 chr2 207213160 207213448 -43474406 + AluSx SINE Alu 1 288 -24 2819 211 80 28 chr2 207213479 207214333 -43473521 + L1ME3 LINE L1 5265 6162 0 331 359 105 0 chr2 207214399 207214580 -43473274 - MIR3 SINE MIR -5 203 4 2102 113 131 53 chr2 207214823 207215220 -43472634 - MSTA LTR MaLR 0 428 1 9408 160 21 18 chr2 207215220 207216867 -43470987 - MSTA-int LTR MaLR 0 1651 1 2322 103 137 11 chr2 207216867 207217247 -43470607 - MSTA LTR MaLR 0 428 1 668 273 191 16 chr2 207217279 207217535 -43470319 - L2 LINE L2 -16 3297 2997 1868 197 47 17 chr2 207217694 207218285 -43469569 + L1MB7 LINE L1 5110 5709 -465 2207 184 29 0 chr2 207218405 207218855 -43468999 + L1MB7 LINE L1 5703 6165 -19 271 284 128 10 chr2 207221273 207221375 -43466479 + L2 LINE L2 3199 3312 -1 2203 246 161 46 chr2 207221424 207223012 -43464842 + HAL1 LINE L1 435 2205 -302 1658 220 30 7 chr2 207223025 207223488 -43464366 + L1MB8 LINE L1 5702 6175 -3 655 308 78 47 chr2 207223491 207223653 -43464201 + L2 LINE L2 2445 2601 -712 3571 115 2 4 chr2 207223653 207224165 -43463689 + MER9 LTR ERVK 1 511 0 655 308 78 47 chr2 207224165 207224826 -43463028 + L2 LINE L2 2601 3295 -18 432 276 32 0 chr2 207224875 207224998 -43462856 + MIR SINE MIR 79 205 -57 604 156 75 151 chr2 207225521 207225720 -43462134 - MER5A DNA MER1_type 0 189 6 779 228 170 16 chr2 207225842 207226154 -43461700 - LTR33A LTR ERVL -10 513 154 426 20 0 0 chr2 207226177 207226228 -43461626 + (CA)n Simple_repeat Simple_repeat 2 52 0 228 273 18 18 chr2 207226290 207226345 -43461509 - L2 LINE L2 -71 3201 3147 845 166 25 25 chr2 207226435 207226598 -43461256 + MLT1A1 LTR MaLR 26 188 -177 273 330 36 9 chr2 207227117 207227229 -43460625 + L2 LINE L2 3191 3305 -8 186 191 29 15 chr2 207227920 207227988 -43459866 + CT-rich Low_complexity Low_complexity 4 72 0 835 263 136 42 chr2 207228020 207228477 -43459377 - LTR33 LTR ERVL -19 502 3 360 0 0 0 chr2 207228781 207228821 -43459033 + (CA)n Simple_repeat Simple_repeat 2 41 0 750 158 14 7 chr2 207229513 207229659 -43458195 - Tigger2 DNA MER2_type -305 2413 2267 495 132 0 0 chr2 207229644 207229712 -43458142 - Tigger2 DNA MER2_type -2650 68 1 * 729 304 82 43 chr2 207230481 207231118 -43456736 - L1ME4a LINE L1 -203 5918 5255 21 0 0 0 chr2 207231348 207231369 -43456485 + AT_rich Low_complexity Low_complexity 1 21 0 988 231 82 12 chr2 207231639 207231691 -43456163 - MLT1J2 LTR MaLR -140 310 263 1435 181 9 0 chr2 207231691 207231912 -43455942 + MER58A DNA MER1_type 2 224 0 988 231 82 12 chr2 207231912 207232114 -43455740 - MLT1J2 LTR MaLR -187 263 38 1347 269 34 13 chr2 207232182 207232565 -43455289 - MLT1I LTR MaLR -9 400 10 789 260 39 10 chr2 207234270 207234366 -43453488 + MIR SINE MIR 23 115 -147 1600 180 10 35 chr2 207234366 207234677 -43453177 - AluJb SINE Alu -9 303 1 789 260 39 10 chr2 207234677 207234784 -43453070 + MIR SINE MIR 115 232 -30 288 0 0 0 chr2 207235165 207235197 -43452657 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 23 33 0 0 chr2 207237286 207237316 -43450538 + AT_rich Low_complexity Low_complexity 1 30 0 210 37 0 0 chr2 207237949 207237976 -43449878 + (CA)n Simple_repeat Simple_repeat 2 28 0 329 256 0 12 chr2 207240450 207240536 -43447318 + L2 LINE L2 3178 3262 -10 327 309 135 39 chr2 207241693 207241871 -43445983 + L3 LINE CR1 1268 1462 -115 * 469 259 153 26 chr2 207241857 207242046 -43445808 - MIR SINE MIR -10 252 40 371 301 174 5 chr2 207242269 207242448 -43445406 - MIR SINE MIR -28 180 1 893 38 0 19 chr2 207243485 207243590 -43444264 - L1PA8 LINE L1 -6 6166 6064 182 145 274 81 chr2 207244331 207244393 -43443461 + MIR SINE MIR 183 256 -6 367 273 58 22 chr2 207244430 207244569 -43443285 - L2 LINE L2 -42 3271 3128 245 181 28 14 chr2 207244698 207244770 -43443084 + (TA)n Simple_repeat Simple_repeat 1 73 0 369 290 74 89 chr2 207245580 207245871 -43441983 + L2 LINE L2 2876 3161 -111 1683 145 7 43 chr2 207245871 207246174 -43441680 - AluJo SINE Alu -20 292 1 369 290 74 89 chr2 207246174 207246285 -43441569 + L2 LINE L2 3161 3272 0 198 0 0 0 chr2 207247681 207247703 -43440151 + (A)n Simple_repeat Simple_repeat 1 22 0 256 340 69 2 chr2 207248251 207248381 -43439473 + MIR SINE MIR 18 152 -61 1948 114 33 4 chr2 207248453 207248726 -43439128 + AluSx SINE Alu 1 281 -31 758 276 64 55 chr2 207249129 207249604 -43438250 - MLT1J2 LTR MaLR -23 469 1 181 279 23 0 chr2 207249629 207249672 -43438182 - MIR3 SINE MIR -16 192 149 495 246 55 72 chr2 207249680 207249835 -43438019 + MER112 DNA MER1_type 13 164 -96 2234 95 7 0 chr2 207249835 207250130 -43437724 - AluSq SINE Alu -16 297 1 495 246 55 72 chr2 207250130 207250210 -43437644 + MER112 DNA MER1_type 164 244 -16 2458 86 0 0 chr2 207250537 207250840 -43437014 - AluSx SINE Alu -9 303 1 21 36 0 0 chr2 207251061 207251089 -43436765 + AT_rich Low_complexity Low_complexity 1 28 0 841 251 24 54 chr2 207251786 207252033 -43435821 + MIR SINE MIR 8 252 -10 1683 152 7 48 chr2 207252154 207252463 -43435391 - AluJo SINE Alu -16 296 1 2170 114 0 29 chr2 207252617 207252933 -43434921 + AluSx SINE Alu 1 307 -5 201 74 0 0 chr2 207253305 207253332 -43434522 + (T)n Simple_repeat Simple_repeat 1 27 0 1977 141 7 3 chr2 207253924 207254215 -43433639 + AluSx SINE Alu 1 292 -20 766 22 0 0 chr2 207254340 207254429 -43433425 - L1PA3 LINE L1 0 6155 6067 7024 21 5 0 chr2 207254429 207255491 -43432363 + L1PA3 LINE L1 4995 6059 -96 308 286 0 0 chr2 207255860 207255930 -43431924 + L2 LINE L2 3229 3298 -15 21 36 0 0 chr2 207255946 207255974 -43431880 + AT_rich Low_complexity Low_complexity 1 28 0 291 104 0 0 chr2 207256505 207256553 -43431301 + (CA)n Simple_repeat Simple_repeat 2 49 0 736 257 5 10 chr2 207257576 207257778 -43430076 + LTR16A1 LTR ERVL 257 457 0 344 260 26 4 chr2 207257841 207257939 -43429915 + MIR SINE MIR 22 104 -104 865 99 28 35 chr2 207258038 207258180 -43429674 - AluSg/x SINE Alu -4 308 168 508 318 95 11 chr2 207258970 207259149 -43428705 + MER91A DNA MER1_type 3 196 0 2064 164 0 0 chr2 207259648 207259960 -43427894 + AluSx SINE Alu 1 312 0 325 147 11 8 chr2 207262535 207262604 -43425250 - MLT2B1 LTR ERVL -344 70 1 21 0 0 0 chr2 207262609 207262630 -43425224 + AT_rich Low_complexity Low_complexity 1 21 0 202 387 58 7 chr2 207263654 207263791 -43424063 + L2 LINE L2 3112 3255 -17 1957 187 36 30 chr2 207263914 207264352 -43423502 + L1MA9 LINE L1 5834 6274 -38 21 0 0 0 chr2 207264361 207264382 -43423472 + AT_rich Low_complexity Low_complexity 1 21 0 463 303 40 45 chr2 207264798 207265243 -43422611 + L1M4 LINE L1 4695 5137 -1009 2265 129 97 3 chr2 207265390 207265771 -43422083 + MSTA LTR MaLR 12 428 0 9465 170 30 11 chr2 207265775 207267375 -43420479 + MSTA-int LTR MaLR 5 1634 -17 2338 158 89 0 chr2 207267377 207267770 -43420084 + MSTA LTR MaLR 1 428 0 2154 128 7 0 chr2 207267803 207268108 -43419746 + AluSx SINE Alu 2 308 -4 988 194 69 33 chr2 207268233 207268537 -43419317 + L1MC5 LINE L1 7630 7944 -17 22 56 0 0 chr2 207269038 207269074 -43418780 + AT_rich Low_complexity Low_complexity 1 36 0 215 152 0 22 chr2 207269284 207269330 -43418524 + A-rich Low_complexity Low_complexity 2 46 0 634 264 54 64 chr2 207269345 207269861 -43417993 + L1MEd LINE L1 784 1189 -4838 660 296 106 10 chr2 207269932 207270233 -43417621 - LTR16A LTR ERVL -119 331 2 24 0 0 0 chr2 207270626 207270650 -43417204 + AT_rich Low_complexity Low_complexity 1 24 0 2564 157 49 31 chr2 207270650 207271161 -43416693 - L1MA7 LINE L1 -2 6289 5770 876 120 0 0 chr2 207271169 207271302 -43416552 - L1PB1 LINE L1 -2 6149 6017 1878 115 0 4 chr2 207271311 207271563 -43416291 + AluSg SINE Alu 36 286 -24 2761 76 8 46 chr2 207271580 207271975 -43415879 - L1PB1 LINE L1 0 6151 5772 21 36 0 0 chr2 207272022 207272050 -43415804 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 207272153 207272181 -43415673 + AT_rich Low_complexity Low_complexity 1 28 0 16344 88 6 1 chr2 207272268 207275177 -43412677 - L1PA7 LINE L1 -5 6149 3239 281 200 40 0 chr2 207275190 207275290 -43412564 - L1 LINE L1 -2976 3886 3783 2175 133 105 40 chr2 207275291 207275867 -43411987 - MER51B LTR ERV1 0 377 1 3415 235 8 5 chr2 207275867 207276642 -43411212 - L1 LINE L1 -3077 3785 3009 2828 107 9 7 chr2 207276643 207277073 -43410781 + HERVH LTR ERV1 7283 7713 0 1985 124 37 9 chr2 207277073 207277464 -43410390 + LTR7 LTR ERV1 1 450 0 7088 95 81 14 chr2 207277465 207278304 -43409550 - L1PBa LINE L1 -3849 3013 2073 2122 155 0 0 chr2 207278304 207278614 -43409240 - AluSq SINE Alu -3 310 1 7088 95 81 14 chr2 207278614 207278941 -43408913 - L1PBa LINE L1 -4789 2073 1769 4018 125 206 17 chr2 207278944 207279719 -43408135 - L1PBa LINE L1 -5322 1541 620 1173 148 10 0 chr2 207279699 207279895 -43407959 - L1PBa LINE L1 -6663 200 3 * 1956 173 31 0 chr2 207279900 207280252 -43407602 - L1M2 LINE L1 -506 5785 5423 777 197 71 16 chr2 207280408 207280591 -43407263 + MLT1A1 LTR MaLR 173 365 0 418 310 144 0 chr2 207282485 207282672 -43405182 + MIR SINE MIR 48 261 -1 205 264 38 0 chr2 207282751 207282804 -43405050 + L2 LINE L2 3250 3304 -9 1945 99 0 8 chr2 207283146 207283409 -43404445 + AluSg1 SINE Alu 47 307 -2 735 261 53 53 chr2 207285594 207285858 -43401996 - MER21B LTR ERV1 -125 738 475 * 3757 159 51 15 chr2 207285854 207286540 -43401314 - MER50 LTR ERV1 -23 711 1 1070 205 35 175 chr2 207286544 207286698 -43401156 - MER21B LTR ERV1 -396 467 293 880 190 14 0 chr2 207286698 207286879 -43400975 + FRAM SINE Alu 1 50 0 1070 205 35 175 chr2 207286879 207287256 -43400598 - MER21B LTR ERV1 -570 293 25 23 0 0 0 chr2 207287841 207287864 -43399990 + AT_rich Low_complexity Low_complexity 1 23 0 2903 219 52 21 chr2 207288061 207288775 -43399079 + L1ME1 LINE L1 5405 6140 -26 38 51 0 0 chr2 207288775 207288834 -43399020 + AT_rich Low_complexity Low_complexity 1 59 0 351 0 0 0 chr2 207288955 207288994 -43398860 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 1952 127 60 0 chr2 207289322 207289605 -43398249 + AluSx SINE Alu 1 300 -12 1635 191 3 3 chr2 207289919 207290212 -43397642 + AluJo SINE Alu 1 293 -19 2067 136 3 7 chr2 207290768 207291076 -43396778 + AluSx SINE Alu 1 307 -5 2315 200 61 7 chr2 207291168 207291613 -43396241 + MER70B LTR ERVL 1 469 -109 1312 220 106 73 chr2 207291763 207292356 -43395498 + L1MC4 LINE L1 7445 7995 0 553 271 148 0 chr2 207294249 207294404 -43393450 - MER5A DNA MER1_type -3 186 9 482 315 148 0 chr2 207295574 207295790 -43392064 - MIR SINE MIR 0 262 15 3365 193 21 23 chr2 207296057 207296652 -43391202 - L1M2 LINE L1 -743 5403 4842 2149 105 26 10 chr2 207296652 207296958 -43390896 + AluSq SINE Alu 1 311 -2 3365 193 21 23 chr2 207296958 207297135 -43390719 - L1M2 LINE L1 -1304 4842 4666 893 354 106 22 chr2 207297279 207297663 -43390191 + L2 LINE L2 1975 2325 -989 513 32 0 0 chr2 207297663 207297726 -43390128 + (CA)n Simple_repeat Simple_repeat 2 64 0 893 354 106 22 chr2 207297726 207298259 -43389595 + L2 LINE L2 2325 2969 -345 306 311 25 42 chr2 207298315 207298434 -43389420 + L2 LINE L2 3147 3263 -9 380 197 53 0 chr2 207298649 207298725 -43389129 + MER102b DNA MER1_type 42 121 -220 1629 171 13 13 chr2 207298726 207299035 -43388819 + L1 LINE L1 4613 4921 -1225 2226 120 0 0 chr2 207299038 207299347 -43388507 + AluSx SINE Alu 1 309 -3 314 214 191 104 chr2 207299355 207299575 -43388279 + MER102b DNA MER1_type 103 341 0 310 333 47 8 chr2 207300254 207300383 -43387471 + L2 LINE L2 3139 3272 0 186 43 0 0 chr2 207301965 207301988 -43385866 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1673 236 137 25 chr2 207302421 207302984 -43384870 + MLT1E2 LTR MaLR 1 626 0 561 335 44 15 chr2 207303867 207304073 -43383781 + MIR SINE MIR 37 248 -14 248 290 0 0 chr2 207305053 207305122 -43382732 - MLT1I LTR MaLR -269 140 72 369 195 13 26 chr2 207305158 207305235 -43382619 + MER116 DNA Mariner 3 78 -2 5764 179 38 31 chr2 207305424 207306823 -43381031 - L1MB7 LINE L1 -58 6126 4706 1905 153 0 20 chr2 207306823 207307118 -43380736 - AluJb SINE Alu -23 289 1 5764 179 38 31 chr2 207307118 207307896 -43379958 - L1MB7 LINE L1 -1478 4706 3935 2282 106 0 0 chr2 207310472 207310765 -43377089 - AluSc SINE Alu -16 293 1 25 0 0 0 chr2 207311136 207311161 -43376693 + AT_rich Low_complexity Low_complexity 1 25 0 215 282 59 71 chr2 207311179 207311264 -43376590 - L2 LINE L2 -40 3232 3149 354 258 50 48 chr2 207311991 207312128 -43375726 - MLT1H LTR MaLR -323 226 47 4874 151 191 54 chr2 207312128 207313252 -43374602 - MER52C LTR ERV1 0 1278 1 354 258 50 48 chr2 207313252 207313296 -43374558 - MLT1H LTR MaLR -502 47 5 703 233 57 65 chr2 207313325 207313570 -43374284 - MER46C DNA MER2_type -2 336 94 910 274 36 30 chr2 207313686 207314047 -43373807 - LTR16B LTR ERVL -1 463 101 2127 106 3 30 chr2 207315410 207315713 -43372141 - AluSq SINE Alu -18 295 1 418 320 113 48 chr2 207316169 207316478 -43371376 - L2 LINE L2 -3 3269 2941 329 314 43 21 chr2 207317326 207317466 -43370388 - MIR SINE MIR -30 232 90 389 289 75 25 chr2 207317706 207317865 -43369989 - MIR3 SINE MIR -9 199 33 2544 148 21 5 chr2 207318665 207319097 -43368757 + L1MC1 LINE L1 5716 6154 -179 808 201 19 0 chr2 207319097 207319251 -43368603 + MSTB LTR MaLR 1 157 -269 3948 132 113 38 chr2 207319251 207320528 -43367326 - pTR5 LTR ERV1 -26 2412 746 739 223 43 18 chr2 207320528 207320798 -43367056 + MSTB LTR MaLR 115 375 0 1167 131 17 0 chr2 207320801 207320976 -43366878 + L1MC1 LINE L1 6156 6333 0 364 323 32 19 chr2 207321051 207321209 -43366645 - MIR SINE MIR -9 253 94 207 69 0 0 chr2 207321687 207321716 -43366138 + (CA)n Simple_repeat Simple_repeat 2 30 0 211 191 24 0 chr2 207322189 207322231 -43365623 + L2 LINE L2 3261 3303 -10 485 282 58 11 chr2 207322250 207322424 -43365430 - L2 LINE L2 -4 3309 3128 2358 166 128 0 chr2 207322425 207322871 -43364983 + MLT1D LTR MaLR 3 505 0 985 233 134 39 chr2 207322973 207323483 -43364371 + MLT1G1 LTR MaLR 1 590 0 886 278 77 22 chr2 207323483 207323940 -43363914 - L2 LINE L2 -264 3049 2512 426 97 0 0 chr2 207373952 207374014 -43313840 - Alu SINE Alu -251 62 1 843 77 26 0 chr2 207374014 207374131 -43313723 + MER41B LTR ERV1 516 635 0 638 305 102 14 chr2 207374637 207375076 -43312778 + Tigger8 DNA MER2_type 1 478 -188 737 319 45 46 chr2 207375076 207376091 -43311763 + L1M4 LINE L1 4137 5150 -996 478 159 0 45 chr2 207376231 207376319 -43311535 + AluSg/x SINE Alu 209 292 -17 2141 198 53 24 chr2 207376707 207377198 -43310656 + MLT1D LTR MaLR 1 505 0 580 69 42 3 chr2 207377213 207377304 -43310550 + L1MA5 LINE L1 5692 5786 -376 3335 132 24 6 chr2 207377304 207377841 -43310013 + L1PA16 LINE L1 5616 6164 -2 2938 117 63 20 chr2 207377841 207378345 -43309509 + L1MA5 LINE L1 5770 6297 -3 489 309 56 74 chr2 207378365 207378689 -43309165 + L1M4 LINE L1 3640 3957 -2189 1098 316 94 30 chr2 207378701 207379598 -43308256 + L1MEc LINE L1 50 1003 -5393 272 311 34 0 chr2 207379674 207379851 -43308003 + L1M3d LINE L1 1005 1187 -4704 490 242 47 20 chr2 207379928 207380225 -43307629 + L1M3d LINE L1 2722 3026 -2944 836 158 0 0 chr2 207380231 207380351 -43307503 + FLAM_C SINE Alu 5 124 -19 4452 231 71 51 chr2 207380358 207381416 -43306438 + L1M3d LINE L1 3020 4055 -1933 1886 239 58 38 chr2 207381416 207381960 -43305894 - MLT1E LTR MaLR 0 593 35 2362 84 7 0 chr2 207381960 207382256 -43305598 + AluSq SINE Alu 1 298 -15 1886 239 58 38 chr2 207382256 207382292 -43305562 - MLT1E LTR MaLR -558 35 1 4452 231 71 51 chr2 207382292 207383306 -43304548 + L1M3d LINE L1 4055 5162 -826 2428 93 0 0 chr2 207383306 207383616 -43304238 + AluY SINE Alu 1 310 -1 4452 231 71 51 chr2 207383616 207383934 -43303920 + L1M3d LINE L1 5162 5472 -516 916 266 105 27 chr2 207384039 207384630 -43303224 + L1ME3A LINE L1 5262 5916 -253 491 81 0 14 chr2 207384693 207384767 -43303087 + (GGAA)n Simple_repeat Simple_repeat 4 76 0 735 273 5 50 chr2 207384772 207384992 -43302862 + MIR SINE MIR 7 216 -46 2722 90 3 5 chr2 207385300 207385676 -43302178 - THE1C LTR MaLR 0 375 1 185 359 8 62 chr2 207385822 207385950 -43301904 + MIR SINE MIR 23 143 -65 291 293 137 97 chr2 207387262 207387583 -43300271 - L2 LINE L2 0 3272 2939 277 62 77 0 chr2 207389102 207389167 -43298687 + (TA)n Simple_repeat Simple_repeat 2 71 0 458 298 16 8 chr2 207389331 207389455 -43298399 + MIR SINE MIR 16 140 -122 204 269 103 0 chr2 207390605 207390683 -43297171 + MIR SINE MIR 117 202 -60 752 203 74 0 chr2 207390683 207390846 -43297008 + MER69A DNA AcHobo 1 175 -2 265 256 33 22 chr2 207391351 207391441 -43296413 + CT-rich Low_complexity Low_complexity 1 91 0 212 419 78 6 chr2 207391652 207391819 -43296035 - L3b LINE CR1 -3 1580 1402 1775 183 7 3 chr2 207392561 207392862 -43294992 - AluJo SINE Alu -10 302 1 443 255 105 50 chr2 207392953 207393153 -43294701 + MIR SINE MIR 44 254 -8 338 302 87 85 chr2 207393787 207394464 -43293390 + L2 LINE L2 2595 3267 -5 2504 56 0 31 chr2 207397478 207397797 -43290057 - AluY SINE Alu -2 309 1 232 322 17 0 chr2 207398087 207398146 -43289708 - MER91 DNA MER1_type -2 194 135 245 294 174 0 chr2 207398317 207398409 -43289445 + L2 LINE L2 3164 3271 -1 182 136 23 0 chr2 207400115 207400159 -43287695 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 511 265 95 0 chr2 207400453 207400600 -43287254 - MIR SINE MIR -18 244 84 219 69 0 0 chr2 207400628 207400657 -43287197 + (T)n Simple_repeat Simple_repeat 1 29 0 633 254 86 105 chr2 207401414 207401796 -43286058 - MLT1J LTR MaLR -35 476 102 211 375 29 0 chr2 207402854 207402958 -43284896 + L2 LINE L2 2559 2665 -649 1027 188 43 51 chr2 207403157 207403433 -43284421 - ORSL DNA AcHobo 0 275 2 272 336 41 8 chr2 207404610 207404732 -43283122 - L3b LINE CR1 -180 1403 1278 1952 176 24 3 chr2 207404851 207405226 -43282628 + L1MB5 LINE L1 5778 6160 -14 316 333 33 17 chr2 207405422 207405542 -43282312 - L2 LINE L2 -1 3271 3150 302 256 112 0 chr2 207405853 207405978 -43281876 - L1ME4a LINE L1 -6 6115 5977 475 291 120 16 chr2 207405978 207406193 -43281661 + MIR SINE MIR 16 235 -27 193 210 48 18 chr2 207406201 207406368 -43281486 + (CATA)n Simple_repeat Simple_repeat 2 173 0 2084 114 36 23 chr2 207406987 207407295 -43280559 - AluSx SINE Alu 0 312 1 2071 126 30 40 chr2 207407522 207407926 -43279928 - L1MA5 LINE L1 0 6300 5901 1233 240 77 32 chr2 207407993 207408435 -43279419 + MLT1C LTR MaLR 6 467 0 2166 125 61 19 chr2 207408790 207409150 -43278704 + THE1C LTR MaLR 1 375 0 292 278 28 49 chr2 207410096 207410240 -43277614 + MIR SINE MIR 85 225 -37 188 293 93 0 chr2 207410259 207410334 -43277520 - MIR SINE MIR -11 251 170 4638 236 93 40 chr2 207410339 207411693 -43276161 - L1 LINE L1 -1041 5105 3824 2304 117 0 3 chr2 207411693 207412001 -43275853 - AluSq SINE Alu -6 307 1 4638 236 93 40 chr2 207412001 207412920 -43274934 - L1 LINE L1 -2322 3824 2593 1758 213 0 0 chr2 207412920 207413216 -43274638 + AluJb SINE Alu 1 296 -16 4638 236 93 40 chr2 207413216 207413672 -43274182 - L1 LINE L1 -3553 2593 2162 416 263 8 8 chr2 207413681 207413799 -43274055 - MLT1F1 LTR MaLR -28 539 422 262 330 139 19 chr2 207413884 207414151 -43273703 + LTR67 LTR ERVL 132 430 -127 244 266 24 40 chr2 207414252 207414376 -43273478 - LTR67 LTR ERVL -10 547 426 252 221 0 0 chr2 207415936 207416013 -43271841 + (TG)n Simple_repeat Simple_repeat 1 77 0 392 215 6 17 chr2 207416029 207416201 -43271653 + (TG)n Simple_repeat Simple_repeat 1 170 0 477 0 0 0 chr2 207416778 207416831 -43271023 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 335 175 19 19 chr2 207418139 207418242 -43269612 + (TG)n Simple_repeat Simple_repeat 1 103 0 473 223 0 19 chr2 207418981 207419084 -43268770 - MER5A DNA MER1_type -85 104 4 658 200 55 0 chr2 207419240 207419385 -43268469 - MIR SINE MIR -1 261 109 16791 220 41 25 chr2 207419387 207426769 -43261085 - L1PA15 LINE L1 -19 7584 45 200 234 0 62 chr2 207428604 207428668 -43259186 + GA-rich Low_complexity Low_complexity 3 62 0 464 275 18 0 chr2 207429340 207429449 -43258405 - L2 LINE L2 0 3313 3203 23 0 0 0 chr2 207429908 207429931 -43257923 + AT_rich Low_complexity Low_complexity 1 23 0 606 217 37 12 chr2 207431361 207431522 -43256332 + MIR SINE MIR 98 262 0 1230 249 101 56 chr2 207431526 207432120 -43255734 - HsTC2a DNA Tc2 0 744 124 271 303 8 0 chr2 207432744 207432863 -43254991 - L1M4 LINE L1 -852 5294 5175 5190 148 21 45 chr2 207433059 207434012 -43253842 - L1MA7 LINE L1 -1 6290 5316 1950 131 121 40 chr2 207434012 207434408 -43253446 + MSTA LTR MaLR 1 428 0 9392 124 38 43 chr2 207434410 207435996 -43251858 + MSTA-int LTR MaLR 3 1580 0 1844 162 133 16 chr2 207435996 207436379 -43251475 + MSTA LTR MaLR 1 428 0 5190 148 21 45 chr2 207436379 207437376 -43250478 - L1MA7 LINE L1 -974 5317 4377 301 275 58 127 chr2 207437584 207438049 -43249805 - MLT1K LTR MaLR -13 575 143 259 305 126 0 chr2 207438297 207438403 -43249451 + MIR3 SINE MIR 51 171 -37 292 214 78 48 chr2 207438599 207438702 -43249152 - MLT1K LTR MaLR 0 588 483 180 0 0 0 chr2 207439016 207439036 -43248818 + (A)n Simple_repeat Simple_repeat 1 20 0 269 314 0 12 chr2 207440354 207440440 -43247414 + MIR3 SINE MIR 116 200 -8 270 320 195 20 chr2 207440533 207440733 -43247121 + MIR SINE MIR 16 250 -12 218 179 0 0 chr2 207440823 207440862 -43246992 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 2289 140 6 0 chr2 207442233 207442591 -43245263 + MER46B DNA MER2_type 2 236 0 1545 169 35 28 chr2 207442608 207442784 -43245070 - AluJo SINE Alu 0 312 132 243 0 0 0 chr2 207442784 207442811 -43245043 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1545 169 35 28 chr2 207442811 207442924 -43244930 - AluJo SINE Alu -180 132 21 364 281 183 36 chr2 207443033 207443421 -43244433 + L1ME4a LINE L1 5497 5941 -180 1848 153 7 4 chr2 207443473 207443754 -43244100 + AluJo SINE Alu 3 284 -28 669 13 0 0 chr2 207443754 207443832 -43244022 + (CA)n Simple_repeat Simple_repeat 2 79 0 400 294 25 17 chr2 207444140 207444259 -43243595 - L2 LINE L2 0 3272 3153 2012 149 7 0 chr2 207444466 207444761 -43243093 + AluJo SINE Alu 1 297 -15 266 352 0 0 chr2 207445269 207445360 -43242494 + CT-rich Low_complexity Low_complexity 3 93 0 678 273 39 55 chr2 207445448 207445665 -43242189 - MIR SINE MIR -40 222 12 310 299 197 0 chr2 207445877 207446024 -43241830 + MIR SINE MIR 71 246 -16 969 215 36 31 chr2 207446115 207446338 -43241516 + MER58A DNA MER1_type 1 224 0 2311 82 0 0 chr2 207447615 207447921 -43239933 + AluY SINE Alu 1 306 0 26 30 0 0 chr2 207448316 207448349 -43239505 + AT_rich Low_complexity Low_complexity 1 33 0 369 248 44 18 chr2 207448410 207448523 -43239331 + MIR SINE MIR 49 164 -98 686 181 0 24 chr2 207448907 207449034 -43238820 + FLAM_C SINE Alu 6 129 -14 22 0 0 0 chr2 207449034 207449056 -43238798 + AT_rich Low_complexity Low_complexity 1 22 0 240 342 0 25 chr2 207449060 207449139 -43238715 - MER5B DNA MER1_type -78 100 24 2081 125 0 0 chr2 207450282 207450561 -43237293 + AluSx SINE Alu 6 284 -28 3133 174 48 32 chr2 207453137 207453459 -43234395 - L1MD2 LINE L1 -1 6358 6042 2250 101 0 19 chr2 207453459 207453767 -43234087 - AluY SINE Alu -9 302 1 3133 174 48 32 chr2 207453767 207454155 -43233699 - L1MD2 LINE L1 -317 6042 5637 618 313 16 48 chr2 207455390 207455639 -43232215 - MIR SINE MIR 0 262 22 733 150 0 0 chr2 207455679 207455792 -43232062 + AluJb SINE Alu 85 197 -115 628 136 0 0 chr2 207456324 207456412 -43231442 - AluJb SINE Alu -21 291 204 281 319 88 20 chr2 207456463 207456667 -43231187 - MIR SINE MIR -19 243 26 2134 205 84 2 chr2 207457345 207457823 -43230031 - LTR53 LTR ERVL 0 519 3 350 204 10 48 chr2 207458142 207458245 -43229609 - LTR67 LTR ERVL 0 557 459 180 0 0 0 chr2 207458570 207458590 -43229264 + (CAAAAA)n Simple_repeat Simple_repeat 1 20 0 21 57 0 0 chr2 207458908 207458943 -43228911 + AT_rich Low_complexity Low_complexity 1 35 0 282 116 0 0 chr2 207459925 207459968 -43227886 + (CA)n Simple_repeat Simple_repeat 2 44 0 245 219 14 0 chr2 207460157 207460230 -43227624 + GA-rich Low_complexity Low_complexity 4 77 0 348 300 80 35 chr2 207460661 207460861 -43226993 + HAL1 LINE L1 793 1001 -1506 319 315 60 8 chr2 207460886 207461121 -43226733 + L1MEd LINE L1 915 1161 -4958 4223 144 25 29 chr2 207461141 207461948 -43225906 + L1MB4 LINE L1 5376 6179 -1 287 260 101 35 chr2 207462015 207462184 -43225670 + HAL1 LINE L1 1283 1462 -1045 1286 124 0 5 chr2 207462194 207462395 -43225459 + MLT1A1 LTR MaLR 1 200 -165 2291 112 48 28 chr2 207462413 207462770 -43225084 + THE1B LTR MaLR 1 364 0 5984 91 31 0 chr2 207462770 207463628 -43224226 + THE1B-int LTR MaLR 1 885 -695 339 62 0 0 chr2 207463626 207463674 -43224180 + THE1B-int LTR MaLR 1533 1580 0 * 1998 127 49 62 chr2 207463674 207463842 -43224012 + THE1B LTR MaLR 1 170 -194 2287 109 0 3 chr2 207463842 207464145 -43223709 + AluSg SINE Alu 1 302 -8 1998 127 49 62 chr2 207464145 207464345 -43223509 + THE1B LTR MaLR 170 364 0 772 111 24 0 chr2 207464345 207464471 -43223383 + MLT1A1 LTR MaLR 237 365 0 454 279 69 10 chr2 207464478 207464690 -43223164 + HAL1b LINE L1 392 1703 -734 28 29 0 0 chr2 207464759 207464794 -43223060 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 207464992 207465013 -43222841 + AT_rich Low_complexity Low_complexity 1 21 0 212 209 23 35 chr2 207465112 207465198 -43222656 + A-rich Low_complexity Low_complexity 1 85 0 271 203 17 0 chr2 207465224 207465283 -43222571 - MIR SINE MIR -21 241 182 64 26 0 0 chr2 207465576 207465654 -43222200 + AT_rich Low_complexity Low_complexity 1 78 0 2091 117 0 0 chr2 207465985 207466267 -43221587 + AluSg1 SINE Alu 1 282 -27 252 86 0 0 chr2 207466308 207466343 -43221511 + (A)n Simple_repeat Simple_repeat 1 35 0 23 33 0 0 chr2 207466535 207466565 -43221289 + AT_rich Low_complexity Low_complexity 1 30 0 1387 229 14 14 chr2 207469620 207469969 -43217885 - L1MCb LINE L1 -5098 947 599 1249 278 33 51 chr2 207470087 207470659 -43217195 - L1MCb LINE L1 -5483 562 1 864 190 139 13 chr2 207470677 207470993 -43216861 + L1ME2 LINE L1 2645 3000 -3146 1165 225 12 4 chr2 207470993 207471237 -43216617 - MLT1E LTR MaLR 0 593 348 2117 256 132 13 chr2 207471237 207471557 -43216297 + L1ME2 LINE L1 3505 3785 -2361 2079 134 3 0 chr2 207471557 207471848 -43216006 + AluJo SINE Alu 6 297 -15 2117 256 132 13 chr2 207471848 207472475 -43215379 + L1ME2 LINE L1 3785 4565 -1581 1618 235 32 49 chr2 207472476 207472969 -43214885 - MLT1D LTR MaLR 0 505 21 360 125 57 34 chr2 207473005 207473093 -43214761 + L1ME2 LINE L1 4562 4651 -1495 1231 131 101 13 chr2 207473117 207473354 -43214500 - Tigger2 DNA MER2_type 0 2718 2461 4466 150 0 7 chr2 207473419 207474165 -43213689 - Tigger2 DNA MER2_type -1974 744 4 888 221 50 33 chr2 207474172 207474631 -43213223 + L1ME2 LINE L1 4682 5247 -899 582 279 114 4 chr2 207474691 207475018 -43212836 + LTR16A LTR ERVL 63 445 -5 3080 214 38 19 chr2 207475038 207475902 -43211952 + L1ME2 LINE L1 5256 6136 -28 595 249 127 30 chr2 207476196 207476393 -43211461 + MIR SINE MIR 40 255 -7 234 250 42 0 chr2 207478049 207478121 -43209733 - MLT1K LTR MaLR -4 584 510 3291 237 26 7 chr2 207479885 207480654 -43207200 - MER20B DNA MER1_type 0 784 1 549 255 36 47 chr2 207481626 207481818 -43206036 + MLT1H LTR MaLR 359 548 -1 1013 258 43 9 chr2 207482693 207483210 -43204644 - MER115 DNA AcHobo -6 687 105 182 246 98 0 chr2 207483649 207483710 -43204144 - MER5B DNA MER1_type -12 166 100 1538 254 4 23 chr2 207484206 207484760 -43203094 - MER115 DNA AcHobo -24 669 1 194 315 22 11 chr2 207484761 207484853 -43203001 - L2 LINE L2 -939 2375 2283 1188 251 38 74 chr2 207485176 207485363 -43202491 - MLT1J LTR MaLR -107 404 212 2606 138 20 12 chr2 207485363 207485763 -43202091 - MER57A LTR ERV1 0 403 1 1188 251 38 74 chr2 207485763 207485994 -43201860 - MLT1J LTR MaLR -299 212 1 501 313 68 31 chr2 207486876 207487068 -43200786 + MIR SINE MIR 25 223 -39 654 273 139 45 chr2 207487772 207488190 -43199664 + L2 LINE L2 1479 1935 -1379 647 295 82 58 chr2 207488196 207488778 -43199076 + L2 LINE L2 2713 3313 0 22 0 0 0 chr2 207489246 207489268 -43198586 + AT_rich Low_complexity Low_complexity 1 22 0 1970 148 3 13 chr2 207489284 207489589 -43198265 + AluJo SINE Alu 1 302 -10 2124 156 17 20 chr2 207490000 207490346 -43197508 - MER7A DNA MER2_type -1 345 3 459 87 0 0 chr2 207490346 207490415 -43197439 + (TG)n Simple_repeat Simple_repeat 2 70 0 191 313 62 0 chr2 207491097 207491161 -43196693 + L2 LINE L2 3205 3272 0 1383 148 19 9 chr2 207491445 207491661 -43196193 - MER20 DNA MER1_type -1 218 1 235 356 126 31 chr2 207493760 207493982 -43193872 + L2 LINE L2 2952 3194 -78 189 279 0 0 chr2 207494180 207494223 -43193631 - MIR SINE MIR 0 262 220 293 161 0 0 chr2 207494465 207494521 -43193333 + L1MC4 LINE L1 6652 6707 -1335 521 200 200 39 chr2 207494738 207494943 -43192911 - LTR50 LTR ERVL -15 780 543 273 191 15 44 chr2 207494995 207495063 -43192791 - LTR50 LTR ERVL -506 289 224 356 269 296 5 chr2 207495458 207495644 -43192210 - MIR SINE MIR -21 241 2 333 256 197 0 chr2 207495661 207495778 -43192076 - MIR SINE MIR -24 238 99 199 258 30 15 chr2 207496306 207496372 -43191482 - MIR SINE MIR -89 119 53 1387 213 116 44 chr2 207497528 207497960 -43189894 - MLT1C LTR MaLR -2 465 3 4939 215 18 22 chr2 207498805 207499891 -43187963 - L1PB1 LINE L1 0 6151 5068 1595 171 131 28 chr2 207500065 207500515 -43187339 - Charlie4a DNA MER1_type -15 493 1 387 215 89 70 chr2 207501023 207501181 -43186673 - MIR SINE MIR -17 245 85 667 214 78 91 chr2 207501291 207501534 -43186320 + MIR SINE MIR 23 262 0 854 241 84 5 chr2 207501596 207501799 -43186055 + MER20 DNA MER1_type 1 219 0 650 318 79 24 chr2 207501863 207502193 -43185661 - L2 LINE L2 -116 3197 2850 7308 118 11 22 chr2 207503155 207504685 -43183169 + L1MA3 LINE L1 4786 6305 0 1703 164 27 17 chr2 207504721 207504838 -43183016 + AluJb SINE Alu 1 115 -197 189 0 0 0 chr2 207504838 207504859 -43182995 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 1703 164 27 17 chr2 207504859 207505034 -43182820 + AluJb SINE Alu 115 296 -16 1151 265 31 67 chr2 207505193 207505672 -43182182 + MLT1J LTR MaLR 26 487 -24 703 207 0 44 chr2 207505838 207505973 -43181881 - FLAM_A SINE Alu -1 132 4 509 200 19 9 chr2 207506241 207506346 -43181508 + MLT1I LTR MaLR 1 106 -303 642 236 52 35 chr2 207506416 207506524 -43181330 + MLT1I LTR MaLR 233 347 -62 342 0 0 0 chr2 207506524 207506562 -43181292 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 642 236 52 35 chr2 207506562 207506627 -43181227 + MLT1I LTR MaLR 347 409 0 528 234 119 100 chr2 207507124 207507385 -43180469 - L2 LINE L2 0 3313 3048 897 246 73 78 chr2 207507480 207507800 -43180054 + L1MC4 LINE L1 6755 7074 -968 899 228 6 0 chr2 207507800 207507958 -43179896 + FRAM SINE Alu 1 159 -7 897 246 73 78 chr2 207507958 207508100 -43179754 + L1MC4 LINE L1 7074 7215 -827 2055 159 124 25 chr2 207508103 207508538 -43179316 - MLT1D LTR MaLR 0 505 28 818 261 147 84 chr2 207508547 207509141 -43178713 + L1MC4 LINE L1 7260 7890 -152 467 130 13 0 chr2 207509148 207509225 -43178629 + MLT2D LTR ERVL 47 124 -290 182 378 37 0 chr2 207509594 207509676 -43178178 - L2 LINE L2 -14 3258 3174 2288 78 23 43 chr2 207509987 207510333 -43177521 + L1MA2 LINE L1 5966 6304 0 959 309 49 51 chr2 207510334 207511152 -43176702 + L1MEc LINE L1 8 823 -5573 803 155 9 0 chr2 207511155 207511271 -43176583 + FLAM_C SINE Alu 2 118 -25 409 243 171 18 chr2 207511279 207511388 -43176466 + L1MEc LINE L1 808 899 -5497 1723 174 7 0 chr2 207511388 207511692 -43176162 + AluJb SINE Alu 1 306 0 409 243 171 18 chr2 207511692 207511803 -43176051 + L1MEc LINE L1 899 1063 -5333 744 240 101 38 chr2 207514784 207515130 -43172724 - L1M4 LINE L1 -912 5234 4867 874 183 47 6 chr2 207515130 207515299 -43172555 - AluJb SINE Alu -5 307 132 392 147 44 0 chr2 207515302 207515370 -43172484 - L1M4 LINE L1 -1278 4868 4798 * 716 294 114 25 chr2 207515369 207515879 -43171975 - L1MEc LINE L1 -4680 1907 1353 2159 105 7 14 chr2 207516040 207516334 -43171520 + AluSx SINE Alu 1 292 -20 1515 157 49 21 chr2 207516396 207516682 -43171172 + AluJo SINE Alu 1 294 -18 21 57 0 0 chr2 207517691 207517726 -43170128 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr2 207517895 207517924 -43169930 + AT_rich Low_complexity Low_complexity 1 29 0 797 256 78 77 chr2 207518137 207518685 -43169169 + MLT1H LTR MaLR 1 549 0 800 154 0 0 chr2 207519333 207519456 -43168398 - AluSg/x SINE Alu -6 306 184 276 195 0 0 chr2 207519556 207519597 -43168257 - Alu SINE Alu -259 41 1 2221 112 45 9 chr2 207519994 207520324 -43167530 + MER2 DNA MER2_type 2 343 -1 232 360 79 0 chr2 207520351 207520440 -43167414 + L3 LINE CR1 1479 1574 -3 399 296 28 80 chr2 207522111 207522287 -43165567 - L2 LINE L2 -96 3176 3010 1439 164 22 61 chr2 207522346 207522657 -43165197 + MLT1B LTR MaLR 1 299 -91 22 0 0 0 chr2 207523077 207523099 -43164755 + AT_rich Low_complexity Low_complexity 1 22 0 2186 98 24 0 chr2 207523360 207523657 -43164197 - AluSg SINE Alu -6 304 1 321 170 0 0 chr2 207524097 207524150 -43163704 - L2 LINE L2 0 3313 3261 1007 147 6 0 chr2 207524204 207524360 -43163494 - FRAM SINE Alu -19 157 1 304 233 62 85 chr2 207524650 207524779 -43163075 - L1MEc LINE L1 -5635 774 649 2171 58 38 17 chr2 207526051 207526344 -43161510 + AluSq SINE Alu 1 299 -14 1993 119 7 3 chr2 207526375 207526668 -43161186 + AluJb SINE Alu 1 294 -18 231 206 109 22 chr2 207526938 207527030 -43160824 + L1 LINE L1 2745 2844 -3302 1755 142 10 48 chr2 207527255 207527433 -43160421 - L1MC1 LINE L1 0 6333 6171 2246 112 0 3 chr2 207527433 207527737 -43160117 - AluSq SINE Alu -10 303 1 1755 142 10 48 chr2 207527737 207527869 -43159985 - L1MC1 LINE L1 -162 6171 6035 229 250 43 33 chr2 207527870 207527962 -43159892 + L1 LINE L1 4942 5034 -1112 1426 248 120 36 chr2 207528240 207528624 -43159230 + L1MC4a LINE L1 5432 5883 -1925 2532 61 0 3 chr2 207528624 207528921 -43158933 - AluY SINE Alu -15 296 1 1426 248 120 36 chr2 207528921 207529121 -43158733 + L1MC4a LINE L1 5883 6065 -1743 379 225 169 84 chr2 207529126 207529375 -43158479 + L1MC4a LINE L1 6113 6382 -1426 4898 149 29 37 chr2 207529375 207530205 -43157649 - MER6 DNA MER2_type 0 865 43 1253 231 230 60 chr2 207530223 207530910 -43156944 + L1MC4 LINE L1 6388 7191 -851 1800 222 38 38 chr2 207530911 207531265 -43156589 + L1MC4 LINE L1 7404 7760 -282 1832 140 13 44 chr2 207531265 207531580 -43156274 - AluSx SINE Alu -7 305 1 1800 222 38 38 chr2 207531580 207531725 -43156129 + L1MC4 LINE L1 7759 7903 -139 21 36 0 0 chr2 207531730 207531758 -43156096 + AT_rich Low_complexity Low_complexity 1 28 0 597 175 8 0 chr2 207531782 207531902 -43155952 + L1MC4 LINE L1 7922 8042 0 2171 139 0 0 chr2 207532537 207532846 -43155008 - AluSx SINE Alu -3 309 1 701 295 22 22 chr2 207534413 207534637 -43153217 - MIR SINE MIR -14 248 25 785 258 37 0 chr2 207537036 207537226 -43150628 + MIR SINE MIR 64 260 -2 2198 92 17 0 chr2 207537500 207537793 -43150061 + AluSp SINE Alu 1 298 -15 595 323 97 36 chr2 207538237 207538290 -43149564 - LTR16A LTR ERVL -8 442 394 2458 62 0 3 chr2 207538290 207538596 -43149258 + AluY SINE Alu 1 305 -6 595 323 97 36 chr2 207538596 207538954 -43148900 - LTR16A LTR ERVL -56 394 6 42 0 0 35 chr2 207539302 207539318 -43148536 + AT_rich Low_complexity Low_complexity 1 16 -39 1490 160 75 8 chr2 207539318 207539586 -43148268 + AluJo SINE Alu 1 286 -26 42 0 0 35 chr2 207539586 207539626 -43148228 + AT_rich Low_complexity Low_complexity 16 55 0 23 0 0 0 chr2 207539754 207539777 -43148077 + AT_rich Low_complexity Low_complexity 1 23 0 1437 148 171 0 chr2 207540031 207540288 -43147566 - AluJo SINE Alu 0 302 2 194 302 111 0 chr2 207540787 207540850 -43147004 - L3 LINE CR1 -41 1536 1467 1274 117 6 6 chr2 207541257 207541437 -43146417 + AluSq SINE Alu 1 180 -133 225 65 0 0 chr2 207541437 207541468 -43146386 + (GA)n Simple_repeat Simple_repeat 2 32 0 2459 65 0 0 chr2 207542298 207542592 -43145262 + AluY SINE Alu 2 295 -16 180 0 0 0 chr2 207542955 207542975 -43144879 + (ATG)n Simple_repeat Simple_repeat 2 21 0 1808 167 0 20 chr2 207542986 207543280 -43144574 - AluSx SINE Alu -24 288 1 352 235 113 17 chr2 207544499 207544614 -43143240 - L2 LINE L2 -140 3173 3048 880 247 71 74 chr2 207544709 207545028 -43142826 + L1MC4 LINE L1 6755 7074 -968 836 228 6 0 chr2 207545028 207545186 -43142668 + FRAM SINE Alu 1 159 -7 880 247 71 74 chr2 207545186 207545328 -43142526 + L1MC4 LINE L1 7074 7215 -827 2016 159 124 25 chr2 207545331 207545766 -43142088 - MLT1D LTR MaLR 0 505 28 759 263 147 84 chr2 207545775 207546369 -43141485 + L1MC4 LINE L1 7260 7890 -152 453 130 13 0 chr2 207546376 207546453 -43141401 + MLT2D LTR ERVL 47 124 -290 2076 81 26 43 chr2 207547190 207547535 -43140319 + L1MA2 LINE L1 5966 6304 0 889 315 49 50 chr2 207547536 207548353 -43139501 + L1MEc LINE L1 8 823 -5573 766 145 8 0 chr2 207548355 207548472 -43139382 + FLAM_C SINE Alu 1 118 -25 363 243 171 18 chr2 207548480 207548589 -43139265 + L1MEc LINE L1 808 899 -5497 1721 174 7 0 chr2 207548589 207548893 -43138961 + AluJb SINE Alu 1 306 0 363 243 171 18 chr2 207548893 207549004 -43138850 + L1MEc LINE L1 899 1063 -5333 28 0 0 0 chr2 207551533 207551561 -43136293 + AT_rich Low_complexity Low_complexity 1 28 0 371 311 112 62 chr2 207553753 207554191 -43133663 - MLT1L LTR MaLR -36 579 120 365 280 77 35 chr2 207554312 207554455 -43133399 - MER5B DNA MER1_type -29 149 1 22 0 0 0 chr2 207554576 207554598 -43133256 + AT_rich Low_complexity Low_complexity 1 22 0 194 233 33 33 chr2 207555323 207555383 -43132471 + MIR SINE MIR 82 141 -67 23 0 0 0 chr2 207555501 207555524 -43132330 + AT_rich Low_complexity Low_complexity 1 23 0 196 308 19 0 chr2 207555713 207555765 -43132089 - L3 LINE CR1 -4 1573 1521 1006 92 23 0 chr2 207556019 207556150 -43131704 + AluSc SINE Alu 1 134 -175 1861 123 0 4 chr2 207556391 207556651 -43131203 + AluJb SINE Alu 47 305 -7 680 180 8 0 chr2 207556668 207556790 -43131064 + FLAM_C SINE Alu 5 127 -6 1325 31 0 6 chr2 207557272 207557435 -43130419 - L1PA5 LINE L1 -2 6152 5991 1053 152 66 0 chr2 207558052 207558249 -43129605 + MER6B DNA MER2_type 1 210 0 24 32 0 0 chr2 207558723 207558754 -43129100 + AT_rich Low_complexity Low_complexity 1 31 0 884 206 42 0 chr2 207559958 207560123 -43127731 - FAM SINE Alu -3 172 1 380 225 67 33 chr2 207562025 207562145 -43125709 - L1ME LINE L1 -387 5734 5611 1551 209 17 0 chr2 207562206 207562493 -43125361 - AluJb SINE Alu -20 292 1 347 195 0 35 chr2 207562692 207562779 -43125075 - L2 LINE L2 -72 3241 3158 1988 152 26 5 chr2 207562783 207563165 -43124689 - Charlie5 DNA MER1_type 0 2624 2235 419 181 0 137 chr2 207563166 207563315 -43124539 - Charlie5 DNA MER1_type -2487 125 1 1214 279 127 18 chr2 207563346 207563961 -43123893 - L2 LINE L2 -152 3161 2469 340 275 58 8 chr2 207564000 207564120 -43123734 + L1ME1 LINE L1 5581 5706 -2102 1611 177 29 23 chr2 207564225 207564535 -43123319 + AluJb SINE Alu 1 312 0 207 0 0 0 chr2 207564564 207564587 -43123267 + (TA)n Simple_repeat Simple_repeat 1 23 0 869 158 46 28 chr2 207565633 207565935 -43121919 + MSTD LTR MaLR 1 346 -50 1454 201 80 19 chr2 207566107 207566209 -43121645 + L1ME1 LINE L1 5723 5817 -349 1927 155 0 10 chr2 207566209 207566518 -43121336 + AluJb SINE Alu 1 306 -6 1454 201 80 19 chr2 207566518 207566788 -43121066 + L1ME1 LINE L1 5817 6118 -48 2248 94 0 0 chr2 207566802 207567088 -43120766 + AluSx SINE Alu 1 286 -26 2321 109 48 6 chr2 207567277 207567635 -43120219 + THE1C LTR MaLR 3 375 0 9500 104 97 6 chr2 207567635 207569082 -43118772 + THE1C-int LTR MaLR 1 1580 0 2448 111 25 5 chr2 207569082 207569450 -43118404 + THE1C LTR MaLR 1 375 0 2303 91 0 32 chr2 207569647 207569956 -43117898 + AluSx SINE Alu 1 299 -13 222 305 63 32 chr2 207569959 207570054 -43117800 + L3 LINE CR1 588 685 -892 663 167 114 0 chr2 207570055 207570169 -43117685 + FLAM_C SINE Alu 1 127 -16 223 289 141 15 chr2 207570208 207570343 -43117511 + L3 LINE CR1 750 901 -676 1116 257 260 38 chr2 207570475 207571375 -43116479 - L2 LINE L2 -109 3204 2086 482 242 108 38 chr2 207571385 207571542 -43116312 - MIR SINE MIR -63 199 32 210 80 60 20 chr2 207571888 207571938 -43115916 + (TA)n Simple_repeat Simple_repeat 2 53 0 411 108 34 40 chr2 207571943 207572119 -43115735 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 396 37 116 18 chr2 207572139 207572303 -43115551 + (TA)n Simple_repeat Simple_repeat 1 180 0 2276 109 0 0 chr2 207572523 207572825 -43115029 + AluSx SINE Alu 1 302 -10 924 167 64 69 chr2 207572851 207573055 -43114799 + MER3 DNA MER1_type 6 208 -1 24 32 0 0 chr2 207574121 207574152 -43113702 + GC_rich Low_complexity Low_complexity 1 31 0 1611 137 30 50 chr2 207574862 207575162 -43112692 + AluJo SINE Alu 15 308 -4 288 207 69 0 chr2 207575252 207575310 -43112544 - MIR SINE MIR -4 258 197 2063 133 0 16 chr2 207575794 207576103 -43111751 - AluSx SINE Alu -8 304 1 720 278 58 85 chr2 207576823 207577165 -43110689 - MER102b DNA MER1_type -7 334 2 2321 100 0 0 chr2 207577237 207577536 -43110318 + AluSx SINE Alu 3 301 -11 6262 198 60 22 chr2 207578111 207578137 -43109717 + L1MB8 LINE L1 3731 3755 -2423 1916 121 82 28 chr2 207578137 207578493 -43109361 + THE1C LTR MaLR 1 375 0 6262 198 60 22 chr2 207578493 207579928 -43107926 + L1MB8 LINE L1 3755 5290 -888 2150 173 58 7 chr2 207579928 207580339 -43107515 - MSTB1 LTR MaLR 0 432 1 6262 198 60 22 chr2 207580339 207580888 -43106966 + L1MB8 LINE L1 5290 5817 -361 857 129 0 0 chr2 207580919 207581035 -43106819 + FLAM_C SINE Alu 3 118 -25 818 181 33 16 chr2 207581043 207581225 -43106629 + L1MB8 LINE L1 5817 6001 -177 414 148 66 148 chr2 207581228 207581350 -43106504 - MLT1F1 LTR MaLR -455 112 1 2306 65 7 33 chr2 207581435 207581742 -43106112 + AluSg SINE Alu 8 306 -4 458 365 12 6 chr2 207581822 207581992 -43105862 - L2 LINE L2 -536 2778 2608 1152 260 81 42 chr2 207582021 207582532 -43105322 - MLT1H LTR MaLR -16 574 1 1223 231 45 44 chr2 207582628 207583083 -43104771 + MER39 LTR ERV1 250 565 0 1805 166 10 23 chr2 207583749 207584057 -43103797 - AluJb SINE Alu -8 304 1 2052 164 7 0 chr2 207584087 207584391 -43103463 + 7SLRNA srpRNA srpRNA 2 307 -13 1404 179 4 0 chr2 207584797 207585054 -43102800 + L1MDa LINE L1 25 282 -6258 1561 169 62 7 chr2 207585090 207585363 -43102491 + AluSx SINE Alu 1 288 -24 328 197 0 0 chr2 207585375 207585436 -43102418 + AluJ/FLAM SINE Alu 2 62 -240 300 64 64 0 chr2 207585462 207585509 -43102345 - MADE1 DNA Mariner -24 56 7 4266 173 32 3 chr2 207585518 207586415 -43101439 - L1MC2 LINE L1 -232 6112 5189 631 148 56 0 chr2 207586445 207586553 -43101301 - FLAM_C SINE Alu -29 114 1 1520 217 20 10 chr2 207586554 207586955 -43100899 - L1MC2 LINE L1 -946 5200 4796 353 84 0 0 chr2 207586981 207587041 -43100813 - Alu SINE Alu -255 46 1 602 203 5 78 chr2 207587580 207587772 -43100082 - MER97c DNA MER1_type? -912 178 1 2465 84 0 0 chr2 207587834 207588145 -43099709 + AluY SINE Alu 1 311 0 239 313 190 11 chr2 207588182 207588361 -43099493 + MIR SINE MIR 46 256 -6 634 283 100 58 chr2 207588371 207588901 -43098953 + LTR67 LTR ERVL 2 553 -4 1891 145 14 10 chr2 207589257 207589553 -43098301 - AluSx SINE Alu -8 304 8 180 300 144 0 chr2 207590054 207590144 -43097710 - MIR SINE MIR -41 221 119 31 82 0 0 chr2 207590253 207590326 -43097528 + AT_rich Low_complexity Low_complexity 1 73 0 296 283 88 83 chr2 207591984 207592189 -43095665 + L2 LINE L2 223 428 -2886 22 35 0 0 chr2 207592190 207592219 -43095635 + AT_rich Low_complexity Low_complexity 1 29 0 2377 102 0 16 chr2 207592410 207592725 -43095129 - AluSx SINE Alu -2 310 1 27461 91 11 6 chr2 207592728 207597710 -43090144 - L1PA7 LINE L1 0 6154 1156 775 337 97 20 chr2 207597718 207598327 -43089527 + L2 LINE L2 436 1091 -2223 398 265 27 55 chr2 207598754 207598973 -43088881 - L1MC4a LINE L1 -1895 5913 5701 1154 288 129 105 chr2 207599043 207599915 -43087939 + L2 LINE L2 1207 2057 -1257 1839 161 17 7 chr2 207599915 207600214 -43087640 - AluJb SINE Alu -10 302 1 1154 288 129 105 chr2 207600214 207600286 -43087568 + L2 LINE L2 2057 2126 -1188 1734 147 41 38 chr2 207600286 207600579 -43087275 - AluJo SINE Alu -18 294 1 1154 288 129 105 chr2 207600579 207600859 -43086995 + L2 LINE L2 2126 2461 -853 436 298 114 14 chr2 207600863 207601157 -43086697 + L2 LINE L2 2762 3086 -227 2616 87 22 0 chr2 207601287 207601643 -43086211 - THE1B LTR MaLR 0 364 1 1521 274 74 12 chr2 207602572 207603087 -43084767 + MLT1H1 LTR MaLR 1 547 -8 245 209 15 0 chr2 207603250 207603317 -43084537 + (TA)n Simple_repeat Simple_repeat 2 69 0 1789 195 3 0 chr2 207603428 207603725 -43084129 - AluJb SINE Alu -14 298 1 834 293 28 43 chr2 207604191 207604583 -43083271 + L1ME3A LINE L1 5535 5945 -217 1673 199 3 0 chr2 207604841 207605137 -43082717 - AluJo SINE Alu -14 298 2 2467 89 3 3 chr2 207605180 207605493 -43082361 + AluSq SINE Alu 1 313 0 301 186 12 12 chr2 207605495 207605581 -43082273 + (TA)n Simple_repeat Simple_repeat 2 87 0 361 246 8 41 chr2 207605594 207605716 -43082138 + LTR38B LTR ERV1 1 118 -492 279 281 51 77 chr2 207605977 207606290 -43081564 + LTR36 LTR ERV1 307 611 0 22 56 0 0 chr2 207606298 207606334 -43081520 + AT_rich Low_complexity Low_complexity 1 36 0 1848 167 101 107 chr2 207606557 207607313 -43080541 + LTR1B LTR ERV1 1 751 -75 21 0 0 0 chr2 207607805 207607826 -43080028 + AT_rich Low_complexity Low_complexity 1 21 0 2458 49 0 10 chr2 207608615 207608920 -43078934 - AluY SINE Alu -9 302 1 219 313 83 21 chr2 207609043 207609139 -43078715 + MER5A DNA MER1_type 82 183 -6 452 139 89 0 chr2 207609256 207609335 -43078519 - LTR23 LTR ERV1 -278 159 74 2074 109 0 61 chr2 207609340 207609652 -43078202 - AluSq SINE Alu -20 293 1 1507 113 57 40 chr2 207609654 207609954 -43077900 - LTR23 LTR ERV1 -132 305 1 284 254 0 0 chr2 207609989 207610052 -43077802 + MER39 LTR ERV1 5 67 -640 610 176 63 28 chr2 207610086 207610228 -43077626 + LTR29 LTR ERV1 137 283 -339 841 218 48 24 chr2 207610247 207610499 -43077355 + LTR48B LTR ERV1 387 644 0 335 182 20 50 chr2 207610517 207610616 -43077238 + LTR37A LTR ERV1 14 109 -317 1040 244 23 106 chr2 207610991 207611463 -43076391 - LTR8 LTR ERV1 -8 683 251 971 174 40 71 chr2 207611533 207611665 -43076189 - LTR8 LTR ERV1 -434 257 195 838 138 0 36 chr2 207611665 207611825 -43076029 - FLAM_C SINE Alu 0 133 1 971 174 40 71 chr2 207611825 207612004 -43075850 - LTR8 LTR ERV1 -496 195 12 381 171 0 51 chr2 207612024 207612141 -43075713 + MER31-int LTR ERV1 1201 1311 -3625 2200 104 0 14 chr2 207612208 207612505 -43075349 + AluSc SINE Alu 1 293 -16 265 141 28 56 chr2 207612536 207612607 -43075247 + MER31-int LTR ERV1 1200 1268 -6852 23 33 0 0 chr2 207612704 207612734 -43075120 + AT_rich Low_complexity Low_complexity 1 30 0 339 254 7 29 chr2 207612772 207612910 -43074944 + MER31-int LTR ERV1 1666 1800 -3136 2574 55 0 3 chr2 207613618 207613930 -43073924 + AluY SINE Alu 1 311 0 363 232 0 0 chr2 207614018 207614087 -43073767 - Tigger2 DNA MER2_type -10 2708 2640 34 55 0 14 chr2 207614087 207614107 -43073747 + AT_rich Low_complexity Low_complexity 1 20 -52 1651 138 75 4 chr2 207614107 207614375 -43073479 - AluJb SINE Alu -25 287 1 34 55 0 14 chr2 207614375 207614427 -43073427 + AT_rich Low_complexity Low_complexity 20 72 0 300 212 0 0 chr2 207616008 207616074 -43071780 + GA-rich Low_complexity Low_complexity 2 67 0 231 309 0 0 chr2 207618235 207618290 -43069564 + L2 LINE L2 3209 3263 -50 1633 160 36 4 chr2 207618947 207619074 -43068780 + AluJb SINE Alu 1 122 -190 297 0 0 0 chr2 207619074 207619107 -43068747 + (CA)n Simple_repeat Simple_repeat 2 34 0 1633 160 36 4 chr2 207619107 207619260 -43068594 + AluJb SINE Alu 122 290 -22 233 89 22 0 chr2 207619267 207619312 -43068542 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 660 288 38 5 chr2 207622376 207622560 -43065294 - MIR3 SINE MIR -3 205 16 1173 130 9 49 chr2 207624480 207624703 -43063151 + MER20 DNA MER1_type 1 214 -5 284 315 18 0 chr2 207624710 207624821 -43063033 + (TTCA)n Simple_repeat Simple_repeat 1 113 0 1487 203 17 3 chr2 207624866 207625161 -43062693 + AluJo SINE Alu 5 303 -9 1871 135 6 50 chr2 207625589 207625908 -43061946 + AluSx SINE Alu 5 309 -3 2437 92 0 0 chr2 207626259 207626565 -43061289 + AluSc SINE Alu 1 306 -3 21 0 0 0 chr2 207626620 207626641 -43061213 + AT_rich Low_complexity Low_complexity 1 21 0 2433 59 0 16 chr2 207626835 207627141 -43060713 + AluY SINE Alu 1 301 -10 1325 131 5 50 chr2 207627852 207628074 -43059780 - AluJo SINE Alu -99 213 2 801 170 28 7 chr2 207628373 207628514 -43059340 - AluJb SINE Alu -22 290 147 225 143 95 0 chr2 207628549 207628591 -43059263 + MIR3 SINE MIR 141 186 -22 684 286 6 0 chr2 207628705 207628873 -43058981 + AluJo SINE Alu 6 174 -138 423 179 0 0 chr2 207628870 207628937 -43058917 + AluSc SINE Alu 131 197 -112 * 811 253 78 37 chr2 207629128 207629674 -43058180 + L1MC5 LINE L1 7261 7776 -185 263 284 0 0 chr2 207629684 207629751 -43058103 + GA-rich Low_complexity Low_complexity 3 69 0 194 326 90 0 chr2 207629752 207629841 -43058013 + MIR SINE MIR 153 249 -13 24 0 0 0 chr2 207631373 207631397 -43056457 + AT_rich Low_complexity Low_complexity 1 24 0 541 269 74 36 chr2 207633348 207633635 -43054219 + L1ME2 LINE L1 5601 5897 -224 21 0 0 0 chr2 207633847 207633868 -43053986 + AT_rich Low_complexity Low_complexity 1 21 0 202 260 104 0 chr2 207634525 207634602 -43053252 - MIR SINE MIR -72 190 106 362 281 76 58 chr2 207634863 207635034 -43052820 - MIR SINE MIR -54 208 35 1830 171 3 10 chr2 207635038 207635337 -43052517 - AluJb SINE Alu -13 299 3 2075 147 22 64 chr2 207636044 207636451 -43051403 + MLT1B LTR MaLR 1 390 0 1840 162 3 14 chr2 207636964 207637260 -43050594 + AluJo SINE Alu 7 299 -13 1125 163 5 5 chr2 207638220 207638404 -43049450 - AluJb SINE Alu 0 312 129 1330 131 5 45 chr2 207639115 207639336 -43048518 - AluJo SINE Alu -99 213 2 840 142 35 14 chr2 207639635 207639776 -43048078 - AluJb SINE Alu -22 290 147 229 143 95 0 chr2 207639811 207639853 -43048001 + MIR3 SINE MIR 141 186 -22 1578 149 12 119 chr2 207639962 207640290 -43047564 + AluJo SINE Alu 1 293 -9 2506 80 0 3 chr2 207642127 207642439 -43045415 - AluY SINE Alu 0 311 1 2175 119 0 3 chr2 207642440 207642734 -43045120 - AluSx SINE Alu -19 293 1 689 193 130 19 chr2 207643017 207643178 -43044676 - MER96B DNA MER1_type? -238 179 1 21 36 0 0 chr2 207644397 207644425 -43043429 + AT_rich Low_complexity Low_complexity 1 28 0 37 39 0 0 chr2 207644883 207644934 -43042920 + AT_rich Low_complexity Low_complexity 1 51 0 346 300 65 103 chr2 207645523 207645890 -43041964 + L1M2 LINE L1 657 1009 -5840 254 258 15 0 chr2 207646750 207646816 -43041038 + L2 LINE L2 3243 3309 -4 206 304 54 45 chr2 207648309 207648421 -43039433 - MIR SINE MIR -104 158 46 1903 148 0 17 chr2 207651099 207651397 -43036457 - AluSx SINE Alu -19 293 1 894 151 0 0 chr2 207651635 207651761 -43036093 + FLAM_C SINE Alu 5 130 -3 23 33 0 0 chr2 207653713 207653743 -43034111 + AT_rich Low_complexity Low_complexity 1 30 0 492 308 65 82 chr2 207654224 207654392 -43033462 - L2 LINE L2 -357 2957 2788 2050 134 0 38 chr2 207654392 207654705 -43033149 - AluSx SINE Alu -11 301 1 492 308 65 82 chr2 207654705 207654952 -43032902 - L2 LINE L2 -526 2788 2549 462 212 51 0 chr2 207655058 207655176 -43032678 + HAL1 LINE L1 2077 2200 -307 1044 136 7 0 chr2 207655268 207655448 -43032406 - AluSg/x SINE Alu 0 310 130 1773 188 7 0 chr2 207655518 207655811 -43032043 - AluJb SINE Alu -17 295 1 180 148 19 37 chr2 207655827 207655881 -43031973 + CT-rich Low_complexity Low_complexity 4 56 0 5990 251 92 45 chr2 207655882 207656188 -43031666 - HAL1 LINE L1 -1 2506 2216 215 93 23 0 chr2 207656188 207656231 -43031623 + (CA)n Simple_repeat Simple_repeat 2 45 0 5990 251 92 45 chr2 207656231 207658317 -43029537 - HAL1 LINE L1 -291 2216 1 24 0 0 0 chr2 207658943 207658967 -43028887 + AT_rich Low_complexity Low_complexity 1 24 0 365 296 216 6 chr2 207659733 207659909 -43027945 + LTR16C LTR ERVL 179 391 -100 1113 169 22 0 chr2 207659909 207660093 -43027761 - AluJb SINE Alu -21 291 104 258 267 17 0 chr2 207660635 207660695 -43027159 - L1MC5 LINE L1 -864 7097 7037 2077 130 7 0 chr2 207660696 207660989 -43026865 - AluSx SINE Alu -17 295 1 343 324 7 36 chr2 207661073 207661212 -43026642 - MIR SINE MIR -116 146 12 2363 184 47 2 chr2 207661650 207662058 -43025796 - MSTB LTR MaLR 0 426 1 5753 119 36 28 chr2 207662177 207662333 -43025521 + Tigger1 DNA MER2_type 48 201 -2217 2128 154 0 0 chr2 207662333 207662645 -43025209 - AluJb SINE Alu 0 312 1 5753 119 36 28 chr2 207662645 207663386 -43024468 + Tigger1 DNA MER2_type 201 952 -1466 941 112 8 0 chr2 207663387 207663512 -43024342 + FLAM_C SINE Alu 1 126 -17 10215 87 26 36 chr2 207663523 207664362 -43023492 + Tigger1 DNA MER2_type 944 1790 -628 1759 157 11 3 chr2 207664362 207664649 -43023205 + AluSx SINE Alu 11 299 -13 10215 87 26 36 chr2 207664649 207665082 -43022772 + Tigger1 DNA MER2_type 1790 2201 -217 1838 171 0 3 chr2 207665082 207665380 -43022474 - AluJb SINE Alu -15 297 1 10215 87 26 36 chr2 207665380 207665596 -43022258 + Tigger1 DNA MER2_type 2201 2418 0 2078 136 7 0 chr2 207665738 207666039 -43021815 + AluSx SINE Alu 1 303 -9 2089 109 3 35 chr2 207666042 207666353 -43021501 + AluSg SINE Alu 1 301 -9 817 188 0 0 chr2 207666895 207667028 -43020826 + MER3 DNA MER1_type 1 133 -76 800 167 7 21 chr2 207667032 207667176 -43020678 - FLAM_C SINE Alu 0 143 2 24 53 0 0 chr2 207667227 207667265 -43020589 + AT_rich Low_complexity Low_complexity 1 38 0 642 164 27 0 chr2 207667562 207667672 -43020182 + L1MB4 LINE L1 6068 6180 0 541 308 138 1 chr2 207668880 207669076 -43018778 + MIR SINE MIR 4 222 -40 1235 161 189 28 chr2 207669741 207669995 -43017859 - AluSg SINE Alu -5 295 1 728 255 166 14 chr2 207670130 207670479 -43017375 + L1ME4a LINE L1 5479 5880 -241 289 241 181 35 chr2 207670508 207670624 -43017230 - L2 LINE L2 -22 3291 3159 626 256 205 20 chr2 207671984 207672277 -43015577 - L2 LINE L2 -2 3311 2965 651 138 117 103 chr2 207672519 207672583 -43015271 + MER30 DNA MER1_type 84 146 -84 2345 97 7 0 chr2 207672583 207672882 -43014972 + AluSq SINE Alu 1 301 -12 651 138 117 103 chr2 207672882 207672962 -43014892 + MER30 DNA MER1_type 146 230 0 382 316 29 14 chr2 207672968 207673107 -43014747 + L2 LINE L2 3173 3313 0 21 0 0 0 chr2 207674198 207674219 -43013635 + AT_rich Low_complexity Low_complexity 1 21 0 228 100 0 0 chr2 207674269 207674309 -43013545 + (T)n Simple_repeat Simple_repeat 1 40 0 243 0 0 0 chr2 207674741 207674768 -43013086 + (A)n Simple_repeat Simple_repeat 1 27 0 322 328 20 91 chr2 207675805 207676003 -43011851 - MIR3 SINE MIR -7 201 18 288 0 0 0 chr2 207676212 207676244 -43011610 + (T)n Simple_repeat Simple_repeat 1 32 0 371 202 45 0 chr2 207676345 207676434 -43011420 - L2 LINE L2 -287 3026 2934 2366 93 3 3 chr2 207677031 207677341 -43010513 - AluSg SINE Alu 0 310 1 21 57 0 0 chr2 207677911 207677946 -43009908 + AT_rich Low_complexity Low_complexity 1 35 0 1079 266 30 34 chr2 207678457 207678937 -43008917 - ERVL LTR ERVL -3510 2254 1701 2956 295 91 32 chr2 207679022 207680468 -43007386 - ERVL LTR ERVL -3465 1531 2 697 278 87 51 chr2 207680508 207680842 -43007012 - LTR16A LTR ERVL -50 400 55 300 302 85 8 chr2 207681054 207681183 -43006671 - MIR SINE MIR -18 244 106 2172 55 4 0 chr2 207681203 207681458 -43006396 - AluY SINE Alu -11 300 45 285 207 0 17 chr2 207681634 207681692 -43006162 - LTR52 LTR ERVL -62 359 303 259 114 91 0 chr2 207681692 207681736 -43006118 - MLT2D LTR ERVL 0 397 350 296 236 11 0 chr2 207681754 207681843 -43006011 + (TA)n Simple_repeat Simple_repeat 1 90 0 471 35 0 0 chr2 207681863 207681920 -43005934 + (TG)n Simple_repeat Simple_repeat 2 58 0 2211 128 0 0 chr2 207681925 207682231 -43005623 + AluSx SINE Alu 1 306 -6 1922 209 14 0 chr2 207682238 207682582 -43005272 - MLT2D LTR ERVL -65 349 1 739 233 115 39 chr2 207682582 207682860 -43004994 - LTR52 LTR ERVL -114 307 9 388 304 59 30 chr2 207685200 207685335 -43002519 - MIR3 SINE MIR -67 141 3 300 350 31 44 chr2 207685419 207685579 -43002275 + L3 LINE CR1 1404 1561 -16 239 315 146 31 chr2 207685602 207685732 -43002122 - MIR3 SINE MIR -27 181 37 980 283 65 50 chr2 207686157 207686620 -43001234 - MLT1J LTR MaLR -41 470 1 293 302 115 64 chr2 207687232 207687701 -43000153 + L2 LINE L2 2705 3258 -55 270 106 0 0 chr2 207687868 207687915 -42999939 + (TC)n Simple_repeat Simple_repeat 2 48 0 474 18 0 0 chr2 207687946 207688001 -42999853 + (CA)n Simple_repeat Simple_repeat 2 56 0 1455 191 80 9 chr2 207688045 207688388 -42999466 - MLT2D LTR ERVL -48 472 11 315 203 203 34 chr2 207688516 207688634 -42999220 - HsTC2 DNA Tc2 -1760 138 1 186 133 0 0 chr2 207688992 207689022 -42998832 + (TA)n Simple_repeat Simple_repeat 1 30 0 2079 128 61 31 chr2 207689105 207689432 -42998422 + MER1B DNA MER1_type 1 337 0 742 156 30 67 chr2 207689488 207689623 -42998231 + FLAM_A SINE Alu 1 130 -3 2198 77 42 3 chr2 207689737 207690023 -42997831 + AluY SINE Alu 1 297 -14 1245 252 60 18 chr2 207690432 207690813 -42997041 + LTR16A LTR ERVL 54 450 0 1893 290 69 35 chr2 207691090 207691860 -42995994 + ERVL LTR ERVL 370 1165 -3831 501 90 0 0 chr2 207691865 207691932 -42995922 + HY4 scRNA scRNA 27 93 0 318 341 45 8 chr2 207691943 207692075 -42995779 + ERVL LTR ERVL 1149 1285 -3711 577 307 47 0 chr2 207692256 207692448 -42995406 + ERVL LTR ERVL 1619 1819 -3177 430 337 91 30 chr2 207692488 207692817 -42995037 + ERVL LTR ERVL 1953 2301 -3463 737 214 0 27 chr2 207692817 207692990 -42994864 + L1ME2 LINE L1 6002 6177 -1 1452 303 62 64 chr2 207693033 207693205 -42994649 + ERVL LTR ERVL 2350 2521 -2475 1597 123 15 15 chr2 207693205 207693515 -42994339 + AluY SINE Alu 15 324 0 1452 303 62 64 chr2 207693515 207694014 -42993840 + ERVL LTR ERVL 2521 3021 -1975 448 281 82 55 chr2 207694288 207694685 -42993169 + ERVL LTR ERVL 4855 5325 -439 591 238 8 8 chr2 207695429 207695551 -42992303 - L2 LINE L2 -7 3306 3185 420 20 0 0 chr2 207697273 207697322 -42990532 + (CA)n Simple_repeat Simple_repeat 2 50 0 222 313 98 18 chr2 207699304 207699416 -42988438 + L2 LINE L2 2939 3059 -254 536 294 0 7 chr2 207699831 207699967 -42987887 - MIR SINE MIR -7 255 121 717 126 36 0 chr2 207700175 207700286 -42987568 + L1MA3 LINE L1 6191 6305 0 30 0 0 0 chr2 207700286 207700316 -42987538 + AT_rich Low_complexity Low_complexity 1 30 0 1699 169 0 14 chr2 207700316 207700600 -42987254 + AluJo SINE Alu 1 280 -32 297 0 0 0 chr2 207700600 207700633 -42987221 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 295 229 57 58 chr2 207701314 207701453 -42986401 + MIR SINE MIR 44 187 -66 189 300 0 0 chr2 207703496 207703546 -42984308 + L2 LINE L2 3203 3252 -20 2383 90 3 10 chr2 207703553 207703865 -42983989 - AluSg SINE Alu 0 310 1 881 146 15 15 chr2 207708105 207708235 -42979619 + FLAM_C SINE Alu 1 130 -3 1028 118 6 24 chr2 207708943 207709113 -42978741 + L1MB3 LINE L1 6016 6182 -1 3207 117 5 2 chr2 207709203 207709630 -42978224 - MSTA LTR MaLR 0 428 1 32 20 0 20 chr2 207709816 207709847 -42978007 + AT_rich Low_complexity Low_complexity 1 32 -17 1948 160 3 0 chr2 207709847 207710140 -42977714 - AluSx SINE Alu -18 294 1 32 20 0 20 chr2 207710140 207710158 -42977696 + AT_rich Low_complexity Low_complexity 32 49 0 1095 165 0 0 chr2 207711563 207711727 -42976127 - AluJb SINE Alu -16 296 133 1922 101 8 4 chr2 207711731 207712012 -42975842 - AluSx SINE Alu 0 308 27 180 180 20 80 chr2 207712618 207712668 -42975186 - MIR SINE MIR -63 199 153 1756 169 22 0 chr2 207712784 207713062 -42974792 + AluJb SINE Alu 1 284 -28 288 70 0 0 chr2 207713062 207713105 -42974749 + (CAAAC)n Simple_repeat Simple_repeat 1 43 0 1555 171 7 36 chr2 207713335 207713609 -42974245 - AluJb SINE Alu -9 303 38 194 175 25 0 chr2 207714204 207714244 -42973610 - L2 LINE L2 -5 3308 3268 765 286 17 42 chr2 207714244 207714485 -42973369 + MER69B DNA AcHobo 1 235 -991 671 199 139 7 chr2 207714492 207714580 -42973274 + MER45A DNA AcHobo 8 83 -1498 2258 87 40 0 chr2 207714580 207714879 -42972975 - AluY SINE Alu 0 311 1 1693 158 3 30 chr2 207714885 207715182 -42972672 - AluJb SINE Alu -22 290 2 671 199 139 7 chr2 207715182 207715237 -42972617 + MER45A DNA AcHobo 87 178 0 2816 253 117 14 chr2 207715237 207716143 -42971711 + MER69B DNA AcHobo 228 1226 0 658 256 42 12 chr2 207716143 207716311 -42971543 - MIR SINE MIR -34 228 56 188 293 134 37 chr2 207716375 207716457 -42971397 + L2 LINE L2 3024 3113 -200 21 0 0 0 chr2 207717292 207717313 -42970541 + AT_rich Low_complexity Low_complexity 1 21 0 224 312 129 21 chr2 207718158 207718251 -42969603 + L2 LINE L2 3116 3218 -54 398 339 8 15 chr2 207719730 207719860 -42967994 - MIR SINE MIR -110 152 24 1869 148 0 21 chr2 207719946 207720237 -42967617 - AluJb SINE Alu -27 285 1 215 192 41 27 chr2 207722919 207722992 -42964862 + (CATATA)n Simple_repeat Simple_repeat 5 78 0 472 268 129 75 chr2 207723718 207724285 -42963569 - L1MC4a LINE L1 -303 5818 5264 2374 101 0 0 chr2 207724318 207724616 -42963238 - AluSx SINE Alu -14 298 1 983 294 117 41 chr2 207724816 207726480 -42961374 - L1MC4a LINE L1 -1587 4559 2770 341 265 135 65 chr2 207726504 207726704 -42961150 + MLT1J LTR MaLR 234 447 -64 31 26 0 0 chr2 207726964 207727002 -42960852 + AT_rich Low_complexity Low_complexity 1 38 0 498 238 0 63 chr2 207727089 207727232 -42960622 - HsTC2 DNA Tc2 -302 1596 1287 862 234 68 65 chr2 207727244 207727348 -42960506 + MLT1D LTR MaLR 1 103 -402 2261 119 0 6 chr2 207727348 207727659 -42960195 + AluSx SINE Alu 1 309 -3 862 234 68 65 chr2 207727659 207727891 -42959963 + MLT1D LTR MaLR 103 338 -167 1433 295 22 10 chr2 207728068 207728478 -42959376 + HERV16 LTR ERVL 2428 2842 -2154 3324 184 4 2 chr2 207728666 207729209 -42958645 + MER44D DNA MER2_type 1 599 -6 483 333 21 11 chr2 207730576 207730762 -42957092 + MIR3 SINE MIR 18 205 -3 188 366 0 28 chr2 207731054 207731125 -42956729 - L2 LINE L2 -247 3025 2957 747 251 50 0 chr2 207731133 207731332 -42956522 - LTR33 LTR ERVL 0 521 313 2340 142 34 3 chr2 207731454 207731807 -42956047 - THE1B LTR MaLR 0 364 1 1626 196 2 99 chr2 207733150 207733554 -42954300 - MLT1A1 LTR MaLR 0 365 1 181 257 99 59 chr2 207733653 207733754 -42954100 + L3 LINE CR1 1445 1549 -28 1508 179 56 4 chr2 207735195 207735463 -42952391 + AluSx SINE Alu 1 282 -30 225 0 0 0 chr2 207735480 207735505 -42952349 + (TA)n Simple_repeat Simple_repeat 1 25 0 1722 163 25 3 chr2 207735614 207735939 -42951915 - L1MC1 LINE L1 -6 6327 5996 617 290 70 16 chr2 207736592 207736778 -42951076 + MIR SINE MIR 2 197 -65 2213 132 0 0 chr2 207736896 207737207 -42950647 + AluSx SINE Alu 1 311 -1 198 171 0 0 chr2 207737207 207737242 -42950612 - MIR3 SINE MIR -51 157 123 219 316 0 40 chr2 207737774 207737850 -42950004 + MIR SINE MIR 18 90 -118 475 258 120 24 chr2 207738693 207738860 -42948994 - MIR3 SINE MIR -7 201 19 292 204 45 0 chr2 207739057 207739145 -42948709 + (CATATA)n Simple_repeat Simple_repeat 1 92 0 699 273 28 0 chr2 207739377 207739553 -42948301 - MER5A DNA MER1_type 0 189 9 294 273 28 11 chr2 207739634 207739761 -42948093 - L1ME LINE L1 -537 5633 5508 23 33 0 0 chr2 207739942 207739972 -42947882 + AT_rich Low_complexity Low_complexity 1 30 0 1674 177 27 82 chr2 207741175 207741365 -42946489 - MLT1B LTR MaLR 0 390 234 246 32 0 0 chr2 207741365 207741396 -42946458 + (TC)n Simple_repeat Simple_repeat 2 32 0 1674 177 27 82 chr2 207741396 207741618 -42946236 - MLT1B LTR MaLR -156 234 1 209 330 76 8 chr2 207742070 207742188 -42945666 - MIR3 SINE MIR -17 191 66 406 257 92 0 chr2 207742536 207742645 -42945209 + MIR SINE MIR 28 146 -116 835 258 15 13 chr2 207743063 207743294 -42944560 + MIR SINE MIR 31 260 -2 209 360 44 34 chr2 207743606 207743894 -42943960 - L2 LINE L2 -213 3059 2770 251 236 45 0 chr2 207743973 207744062 -42943792 + MER103 DNA DNA 3 95 -71 809 109 0 16 chr2 207744534 207744662 -42943192 - FRAM SINE Alu 0 176 51 310 306 40 32 chr2 207744694 207744818 -42943036 + MIR SINE MIR 56 180 -82 631 218 141 0 chr2 207748013 207748169 -42939685 - MER45A DNA AcHobo 0 178 1 677 258 66 15 chr2 207748536 207748734 -42939120 - MIR SINE MIR -41 221 14 291 289 37 59 chr2 207749982 207750117 -42937737 - L2 LINE L2 0 3313 3182 180 0 0 0 chr2 207750705 207750725 -42937129 + (T)n Simple_repeat Simple_repeat 1 20 0 264 345 53 0 chr2 207751850 207751963 -42935891 - MER5C DNA MER1_type -2 322 204 605 239 127 9 chr2 207752145 207752358 -42935496 - MER5C DNA MER1_type -78 246 9 217 323 8 79 chr2 207752679 207752806 -42935048 + L2 LINE L2 2634 2751 -563 199 336 30 38 chr2 207752834 207752965 -42934889 + L2 LINE L2 2917 3046 -226 428 273 74 17 chr2 207753419 207753595 -42934259 - L1MC4a LINE L1 -1911 5897 5712 187 373 15 15 chr2 207753635 207753702 -42934152 + L2 LINE L2 3205 3271 -1 245 277 225 41 chr2 207753824 207754154 -42933700 + L3b LINE CR1 1108 1546 -37 2559 7 0 3 chr2 207754163 207754445 -42933409 - AluYa5 SINE Alu -15 296 16 7243 57 27 5 chr2 207754699 207755834 -42932020 - L1PA8 LINE L1 -7 6165 5023 6576 92 3 1 chr2 207755946 207756921 -42930933 - L1PA8 LINE L1 -1087 5059 4083 2277 81 3 10 chr2 207757668 207757965 -42929889 + AluY SINE Alu 1 295 -16 17571 178 32 50 chr2 207758504 207759596 -42928258 + L1PA10 LINE L1 12 1122 -5339 222 91 0 0 chr2 207759596 207759629 -42928225 + (CAA)n Simple_repeat Simple_repeat 1 33 0 17571 178 32 50 chr2 207759629 207763134 -42924720 + L1PA10 LINE L1 1122 4646 -1815 1573 112 17 0 chr2 207763134 207763367 -42924487 + L1PA10 LINE L1 5911 6147 -21 6848 125 9 11 chr2 207763372 207765225 -42922629 + L1PA10 LINE L1 4626 6479 -4 1154 209 93 36 chr2 207765563 207765950 -42921904 + MLT1C LTR MaLR 59 467 0 1651 201 103 0 chr2 207766090 207766487 -42921367 + L1PB4 LINE L1 4125 4562 -1584 1300 170 4 9 chr2 207766487 207766716 -42921138 + AluJb SINE Alu 85 312 0 3950 177 43 12 chr2 207766720 207768216 -42919638 + L1PB4 LINE L1 4557 6103 -53 439 17 17 0 chr2 207768318 207768377 -42919477 - L1PA5 LINE L1 -221 5933 5874 239 253 0 33 chr2 207768697 207768788 -42919066 - HAL1b LINE L1 -512 836 749 575 285 75 11 chr2 207768914 207769195 -42918659 - HAL1 LINE L1 -723 1784 1486 818 240 17 38 chr2 207769696 207769983 -42917871 - L1MEc LINE L1 -6085 311 31 1506 239 22 11 chr2 207770201 207770653 -42917201 + MLT1C LTR MaLR 1 457 -10 233 276 81 0 chr2 207771184 207771271 -42916583 + LTR33 LTR ERVL 80 173 -348 286 300 89 17 chr2 207771405 207771585 -42916269 + LTR33 LTR ERVL 329 521 0 448 319 66 33 chr2 207772418 207772600 -42915254 - MIR3 SINE MIR -11 197 10 2838 221 43 6 chr2 207772627 207773257 -42914597 + MER82 DNA MER2_type 1 653 0 571 276 240 15 chr2 207773377 207773768 -42914086 + L2 LINE L2 1689 2167 -1147 260 195 35 138 chr2 207773902 207773989 -42913865 + L2 LINE L2 2220 2297 -1017 2286 297 87 26 chr2 207773995 207775643 -42912211 + L1MEc LINE L1 35 1783 -4613 867 299 13 11 chr2 207775631 207776009 -42911845 + L1MEc LINE L1 3323 3701 -2514 * 1226 291 46 22 chr2 207776123 207776669 -42911185 + HERV16 LTR ERVL 3135 3693 -1303 346 235 12 0 chr2 207776760 207776845 -42911009 + HERV16 LTR ERVL 4144 4229 -1535 608 241 18 6 chr2 207777293 207777459 -42910395 + LTR16B LTR ERVL 297 464 0 933 236 132 5 chr2 207777459 207777861 -42909993 + L1MEc LINE L1 4045 4497 -1718 425 318 175 14 chr2 207777863 207778143 -42909711 + L2 LINE L2 2325 2649 -665 21 71 0 0 chr2 207779383 207779425 -42908429 + AT_rich Low_complexity Low_complexity 1 42 0 693 189 27 27 chr2 207779447 207779595 -42908259 - L1PA15 LINE L1 -21 6144 5997 1222 195 38 19 chr2 207779598 207779916 -42907938 - MER33 DNA MER1_type 0 324 1 1468 41 0 0 chr2 207779958 207780130 -42907724 + L1PA3 LINE L1 5966 6137 -18 30 0 0 0 chr2 207780327 207780357 -42907497 + AT_rich Low_complexity Low_complexity 1 30 0 288 0 0 0 chr2 207780357 207780389 -42907465 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 676 263 269 36 chr2 207780425 207780816 -42907038 + L2 LINE L2 2831 3312 -1 3824 111 70 91 chr2 207781096 207781350 -42906504 - L1PA15 LINE L1 0 6816 6558 1968 137 7 7 chr2 207781350 207781634 -42906220 - AluSx SINE Alu -14 298 15 3824 111 70 91 chr2 207781634 207782174 -42905680 - L1PA15 LINE L1 -258 6558 6038 1935 98 3 3 chr2 207782180 207782467 -42905387 + MER75 DNA T2_type 227 513 -1 13026 212 20 10 chr2 207782467 207783903 -42903951 - L1PA15 LINE L1 -1135 5662 4242 1779 178 45 0 chr2 207783903 207784190 -42903664 - AluJb SINE Alu -11 301 2 13026 212 20 10 chr2 207784190 207786066 -42901788 - L1PA15 LINE L1 -2555 4242 2318 2234 91 0 0 chr2 207786082 207786367 -42901487 - AluY SINE Alu -8 303 19 3375 238 32 51 chr2 207786367 207787873 -42899981 - L1PA15 LINE L1 -4812 1975 95 703 153 8 8 chr2 207787885 207788009 -42899845 - MER33 DNA MER1_type -169 155 32 304 338 7 22 chr2 207788173 207788312 -42899542 + MLT1H LTR MaLR 57 193 -356 1868 151 3 30 chr2 207788534 207788832 -42899022 - AluJo SINE Alu -22 290 1 359 272 193 0 chr2 207789634 207789748 -42898106 - MIR SINE MIR -67 195 60 2032 63 0 0 chr2 207791955 207792192 -42895662 + AluSp SINE Alu 53 289 -24 244 310 114 80 chr2 207792583 207792970 -42894884 - L2 LINE L2 -5 3267 2868 729 223 71 73 chr2 207793174 207793542 -42894312 - L1ME4a LINE L1 -96 6025 5659 1042 80 0 0 chr2 207793543 207793680 -42894174 - AluSp/q SINE Alu -9 304 168 244 279 0 23 chr2 207793687 207793773 -42894081 - L1ME4a LINE L1 -476 5645 5562 193 314 29 29 chr2 207793775 207793880 -42893974 - L2 LINE L2 -638 2676 2572 351 238 75 27 chr2 207794210 207794357 -42893497 - L1ME4a LINE L1 -274 5847 5694 586 141 0 0 chr2 207794360 207794445 -42893409 - AluSc SINE Alu -62 247 163 187 239 164 30 chr2 207794619 207794686 -42893168 - MIR3 SINE MIR -12 196 121 270 305 86 75 chr2 207794865 207795052 -42892802 - MER5A DNA MER1_type 0 189 1 34 0 0 0 chr2 207795086 207795120 -42892734 + AT_rich Low_complexity Low_complexity 1 34 0 1863 128 60 4 chr2 207795130 207795411 -42892443 - AluSx SINE Alu -15 297 1 436 292 180 0 chr2 207795426 207795604 -42892250 + MIR SINE MIR 53 262 0 245 288 30 0 chr2 207799772 207799838 -42888016 - L3 LINE CR1 -11 1566 1499 2137 187 7 17 chr2 207800922 207801340 -42886514 - MLT2D LTR ERVL 0 414 1 234 0 0 0 chr2 207801443 207801469 -42886385 + (CA)n Simple_repeat Simple_repeat 2 27 0 2348 84 0 7 chr2 207801905 207802204 -42885650 - AluSq SINE Alu -16 297 1 940 335 94 18 chr2 207802687 207803293 -42884561 - L3 LINE CR1 -158 1419 768 22 0 0 0 chr2 207803403 207803425 -42884429 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 207803728 207803749 -42884105 + AT_rich Low_complexity Low_complexity 1 21 0 586 296 143 28 chr2 207804101 207804669 -42883185 + L1ME4a LINE L1 5294 5926 -195 27 29 0 0 chr2 207804880 207804914 -42882940 + AT_rich Low_complexity Low_complexity 1 34 0 228 200 33 0 chr2 207806700 207806760 -42881094 + Charlie7 DNA MER1_type 44 105 -2507 * 397 180 138 42 chr2 207806746 207806913 -42880941 + Charlie7 DNA MER1_type 2429 2611 -1 189 378 104 7 chr2 207806994 207807129 -42880725 + L3b LINE CR1 1268 1415 -168 1297 236 108 72 chr2 207807140 207807332 -42880522 + MLT1J LTR MaLR 8 192 -319 1634 175 18 4 chr2 207807332 207807606 -42880248 + AluJo SINE Alu 9 286 -26 1297 236 108 72 chr2 207807606 207807884 -42879970 + MLT1J LTR MaLR 192 495 -16 44 56 0 0 chr2 207807900 207807972 -42879882 + AT_rich Low_complexity Low_complexity 1 72 0 238 270 80 99 chr2 207808935 207809287 -42878567 + L2 LINE L2 1859 2203 -1111 312 289 61 26 chr2 207809750 207809864 -42877990 + L2 LINE L2 3154 3271 -1 2273 125 0 0 chr2 207810025 207810330 -42877524 - AluSx SINE Alu -7 305 1 1073 274 70 49 chr2 207810381 207810928 -42876926 + MLT1F1 LTR MaLR 1 558 -9 240 173 0 39 chr2 207811929 207811981 -42875873 + L2 LINE L2 2928 2977 -336 270 81 0 0 chr2 207812692 207812729 -42875125 + (CATA)n Simple_repeat Simple_repeat 2 38 0 24 0 0 0 chr2 207813480 207813504 -42874350 + AT_rich Low_complexity Low_complexity 1 24 0 31 58 0 0 chr2 207814657 207814709 -42873145 + AT_rich Low_complexity Low_complexity 1 52 0 23 54 0 0 chr2 207815110 207815147 -42872707 + AT_rich Low_complexity Low_complexity 1 37 0 291 316 73 7 chr2 207815548 207815684 -42872170 - MIR SINE MIR -70 192 48 1287 166 136 8 chr2 207815723 207815870 -42871984 - AluJb SINE Alu -3 299 172 226 0 59 0 chr2 207815870 207815904 -42871950 + (TTTG)n Simple_repeat Simple_repeat 4 39 0 1287 166 136 8 chr2 207815904 207816021 -42871833 - AluJb SINE Alu -130 172 1 219 295 51 0 chr2 207816187 207816265 -42871589 - MIR3 SINE MIR -2 206 125 2165 93 17 0 chr2 207816449 207816738 -42871116 - AluSg SINE Alu -14 296 3 606 208 131 18 chr2 207817177 207817345 -42870509 - MIR SINE MIR -14 248 62 600 49 0 0 chr2 207817616 207817698 -42870156 - AluY SINE Alu -229 82 1 2143 130 3 9 chr2 207817711 207818026 -42869828 - AluSq SINE Alu 0 313 1 22 35 0 0 chr2 207818575 207818604 -42869250 + AT_rich Low_complexity Low_complexity 1 29 0 413 364 7 0 chr2 207818635 207818775 -42869079 + MIR3 SINE MIR 59 199 -9 1456 141 13 0 chr2 207820010 207820237 -42867617 - AluJb SINE Alu -2 310 81 25 0 0 0 chr2 207821267 207821292 -42866562 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr2 207821500 207821530 -42866324 + AT_rich Low_complexity Low_complexity 1 30 0 2460 42 0 23 chr2 207822339 207822647 -42865207 + AluY SINE Alu 11 311 0 28 61 0 0 chr2 207824006 207824055 -42863799 + GC_rich Low_complexity Low_complexity 1 49 0 494 222 18 47 chr2 207824573 207824594 -42863260 - L1MA10 LINE L1 0 6334 6314 1412 174 24 36 chr2 207824594 207824927 -42862927 - L1ME2 LINE L1 -9 6155 5827 1139 202 5 5 chr2 207824930 207825143 -42862711 - L1ME2 LINE L1 -421 5745 5533 822 176 44 0 chr2 207825185 207825344 -42862510 + L1MCa LINE L1 78 243 -6183 7332 197 39 45 chr2 207825344 207826890 -42860964 + L1MCa LINE L1 484 2038 -4388 250 116 0 0 chr2 207826890 207826933 -42860921 + Alu SINE Alu 260 302 0 7332 197 39 45 chr2 207826933 207829442 -42858412 + L1MCa LINE L1 2038 4653 -1773 1081 266 18 0 chr2 207829445 207829720 -42858134 + L1MCa LINE L1 4832 5111 -1315 * 1463 253 8 8 chr2 207829715 207830107 -42857747 + L1M2 LINE L1 2186 2577 -4272 848 209 22 11 chr2 207830113 207830295 -42857559 + AluJb SINE Alu 117 300 -12 2102 149 0 10 chr2 207830299 207830607 -42857247 + AluSx SINE Alu 3 307 -5 12624 202 37 38 chr2 207830610 207831992 -42855862 + L1MA9 LINE L1 2986 4368 -3197 2260 110 7 0 chr2 207831992 207832300 -42855554 + AluSp SINE Alu 1 310 -3 12624 202 37 38 chr2 207832300 207834628 -42853226 + L1MA9 LINE L1 4368 6713 -852 248 51 0 26 chr2 207834629 207834668 -42853186 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1624 146 31 14 chr2 207834668 207835433 -42852421 + L1MA9 LINE L1 6788 7721 -10 884 179 13 0 chr2 207835741 207835892 -42851962 - MER45A DNA AcHobo 0 178 26 * 1253 290 44 33 chr2 207835888 207836368 -42851486 - LTR33 LTR ERVL -20 501 17 783 273 0 0 chr2 207836436 207836597 -42851257 - MER5B DNA MER1_type -9 169 9 1032 165 80 47 chr2 207836605 207836817 -42851037 - MER20 DNA MER1_type 0 219 1 660 149 166 86 chr2 207836825 207837000 -42850854 + MER5A DNA MER1_type 1 189 0 212 231 123 15 chr2 207837372 207837437 -42850417 - MER5A DNA MER1_type -1 188 117 15669 188 43 10 chr2 207837847 207840282 -42847572 + L1PB1 LINE L1 6 2360 -4507 2237 113 0 28 chr2 207840282 207840602 -42847252 + AluY SINE Alu 1 311 0 15669 188 43 10 chr2 207840602 207841711 -42846143 + L1PB1 LINE L1 2360 3431 -3436 269 51 26 0 chr2 207841711 207841750 -42846104 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 15669 188 43 10 chr2 207841750 207842957 -42844897 + L1PB1 LINE L1 3431 4597 -2270 180 0 0 0 chr2 207842957 207842977 -42844877 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 15669 188 43 10 chr2 207842977 207843355 -42844499 + L1PB1 LINE L1 4597 4961 -1906 2047 128 0 0 chr2 207843355 207843677 -42844177 + AluSg SINE Alu 1 322 0 15669 188 43 10 chr2 207843677 207845035 -42842819 + L1PB1 LINE L1 4961 6867 0 2115 133 7 3 chr2 207845090 207845399 -42842455 + AluSx SINE Alu 1 310 -2 375 388 65 19 chr2 207846482 207846897 -42840957 - L3b LINE CR1 -48 1535 1102 300 305 21 11 chr2 207847597 207847692 -42840162 - MLT1I LTR MaLR -118 291 196 2304 96 6 3 chr2 207847751 207848063 -42839791 + AluSp SINE Alu 1 313 0 2160 126 40 0 chr2 207848090 207848439 -42839415 + L1MA5 LINE L1 5936 6298 -2 389 260 90 37 chr2 207848907 207849081 -42838773 - MIR SINE MIR -37 225 39 314 299 0 8 chr2 207850301 207850418 -42837436 + MER113 DNA MER1_type? 1 116 -405 338 339 46 0 chr2 207851310 207851419 -42836435 - MIR SINE MIR -120 142 29 309 308 44 0 chr2 207851629 207851720 -42836134 - L2 LINE L2 -9 3263 3169 2344 157 42 5 chr2 207852966 207853348 -42834506 - MSTD LTR MaLR 0 396 1 247 259 46 56 chr2 207854183 207854291 -42833563 - MIR SINE MIR -98 110 4 27 0 0 0 chr2 207854473 207854500 -42833354 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr2 207854687 207854715 -42833139 + AT_rich Low_complexity Low_complexity 1 28 0 221 204 41 0 chr2 207855784 207855833 -42832021 - L2 LINE L2 0 3313 3263 288 0 0 0 chr2 207855897 207855929 -42831925 + (CA)n Simple_repeat Simple_repeat 2 33 0 427 323 73 30 chr2 207856063 207856295 -42831559 - L2 LINE L2 0 3272 3031 312 333 40 0 chr2 207856419 207856518 -42831336 + MER91B DNA MER1_type 77 179 -11 861 169 8 12 chr2 207856695 207856930 -42830924 + CT-rich Low_complexity Low_complexity 1 234 0 2006 128 0 11 chr2 207856934 207857216 -42830638 - AluSx SINE Alu -33 279 1 237 65 0 0 chr2 207858338 207858369 -42829485 + (TG)n Simple_repeat Simple_repeat 1 31 0 1789 183 10 0 chr2 207858395 207858696 -42829158 + AluJo SINE Alu 1 304 -8 614 251 78 39 chr2 207860011 207860190 -42827664 - MER5A DNA MER1_type 0 189 4 456 200 206 19 chr2 207860662 207860822 -42827032 - MIR SINE MIR 0 262 73 2412 56 0 3 chr2 207860930 207861243 -42826611 + AluSg SINE Alu 1 312 0 367 288 80 18 chr2 207862599 207862762 -42825092 + MIR SINE MIR 11 183 -79 2235 122 0 3 chr2 207863314 207863626 -42824228 + AluSq SINE Alu 1 311 -2 2009 133 3 3 chr2 207864150 207864443 -42823411 - AluSx SINE Alu -19 293 1 1050 174 6 0 chr2 207865327 207865505 -42822349 + AluJb SINE Alu 120 298 -14 732 304 52 46 chr2 207865619 207865987 -42821867 + LTR16A LTR ERVL 22 391 -59 2062 326 60 31 chr2 207865996 207866928 -42820926 + HERV16 LTR ERVL 48 1006 -3990 3640 303 59 39 chr2 207867430 207868334 -42819520 + HERV16 LTR ERVL 1621 2505 -2922 2288 99 3 3 chr2 207868334 207868637 -42819217 - AluSp SINE Alu -10 303 1 3640 303 59 39 chr2 207868637 207869541 -42818313 + HERV16 LTR ERVL 2505 3491 -1936 344 261 9 45 chr2 207870038 207870149 -42817705 - L2 LINE L2 -6 3307 3201 1971 164 98 23 chr2 207870294 207870690 -42817164 + MSTC LTR MaLR 3 428 0 844 229 151 0 chr2 207870704 207870896 -42816958 + MER58A DNA MER1_type 1 221 -3 1665 188 10 3 chr2 207871146 207871444 -42816410 + AluJb SINE Alu 1 300 -12 314 257 21 43 chr2 207871466 207871606 -42816248 - L2 LINE L2 -62 3251 3115 456 95 0 0 chr2 207871671 207871734 -42816120 - MSTC LTR MaLR -122 306 244 511 298 149 57 chr2 207871764 207872282 -42815572 - L2 LINE L2 -255 3017 2456 2570 40 0 3 chr2 207872408 207872710 -42815144 + AluY SINE Alu 2 302 -9 29 47 0 0 chr2 207872765 207872808 -42815046 + AT_rich Low_complexity Low_complexity 1 43 0 354 98 0 0 chr2 207872982 207873033 -42814821 + (CA)n Simple_repeat Simple_repeat 1 51 0 870 300 29 4 chr2 207873104 207873381 -42814473 + LTR16A1 LTR ERVL 174 457 0 1704 160 39 20 chr2 207873947 207874289 -42813565 + AluSx SINE Alu 1 348 0 390 272 217 68 chr2 207874290 207874363 -42813491 + L3 LINE CR1 296 357 -1220 1360 77 0 22 chr2 207874363 207874544 -42813310 + L1PA10 LINE L1 5992 6168 0 390 272 217 68 chr2 207874544 207874793 -42813061 + L3 LINE CR1 357 666 -911 253 353 26 72 chr2 207875211 207875517 -42812337 + L2 LINE L2 2457 2748 -566 194 404 102 18 chr2 207875557 207875723 -42812131 + L2 LINE L2 3092 3271 -1 * 1316 294 147 28 chr2 207875719 207875913 -42811941 + L3 LINE CR1 665 835 -742 2663 118 47 38 chr2 207875913 207876337 -42811517 - MSTC LTR MaLR 0 428 1 1316 294 147 28 chr2 207876337 207876957 -42810897 + L3 LINE CR1 835 1576 -1 233 240 31 94 chr2 207878387 207878483 -42809371 + MIR SINE MIR 49 138 -124 574 148 0 33 chr2 207880866 207880988 -42806866 + (TTTC)n Simple_repeat Simple_repeat 3 120 0 636 133 0 0 chr2 207880998 207881096 -42806758 - AluJb SINE Alu -7 305 208 21 0 0 0 chr2 207882402 207882423 -42805431 + AT_rich Low_complexity Low_complexity 1 21 0 216 304 80 36 chr2 207882890 207883028 -42804826 - L2 LINE L2 -4 3309 3166 2627 36 3 3 chr2 207883193 207883501 -42804353 + AluY SINE Alu 1 308 -3 558 151 193 0 chr2 207883681 207883800 -42804054 - MIR SINE MIR -81 181 40 738 320 56 63 chr2 207883849 207884437 -42803417 - L2 LINE L2 -515 2799 2216 2207 119 0 10 chr2 207884570 207884872 -42802982 - AluSx SINE Alu -11 301 3 189 402 0 9 chr2 207885171 207885278 -42802576 + L2 LINE L2 2682 2787 -527 350 222 37 44 chr2 207885346 207885481 -42802373 - LTR33 LTR ERVL -4 517 384 530 266 44 39 chr2 207885536 207885765 -42802089 - L1ME LINE L1 -571 5591 5362 228 241 253 0 chr2 207885765 207885844 -42802010 - MIR SINE MIR -122 140 42 2249 138 59 6 chr2 207886322 207886677 -42801177 - MLT1A2 LTR MaLR 0 374 1 1904 196 123 7 chr2 207887200 207887648 -42800206 - MLT1D LTR MaLR 0 505 6 449 320 80 26 chr2 207887668 207887883 -42799971 - MIR SINE MIR -12 250 31 207 184 0 61 chr2 207888141 207888190 -42799664 + GA-rich Low_complexity Low_complexity 3 48 0 546 262 128 33 chr2 207888309 207888459 -42799395 + LTR33A LTR ERVL 2 136 -387 1241 268 74 67 chr2 207888459 207889146 -42798708 - MER115 DNA AcHobo -1 692 1 546 262 128 33 chr2 207889146 207889396 -42798458 + LTR33A LTR ERVL 136 518 -5 213 39 0 0 chr2 207890572 207890598 -42797256 + (TG)n Simple_repeat Simple_repeat 1 26 0 1602 144 3 120 chr2 207891260 207891593 -42796261 - AluSx SINE Alu -18 294 1 186 200 0 0 chr2 207891854 207891889 -42795965 - MIR SINE MIR -56 152 117 29 28 0 0 chr2 207892305 207892341 -42795513 + AT_rich Low_complexity Low_complexity 1 36 0 185 383 12 12 chr2 207896218 207896299 -42791555 - L3 LINE CR1 -435 1142 1062 2262 114 3 0 chr2 207898228 207898534 -42789320 - AluSx SINE Alu -5 307 1 204 315 105 21 chr2 207898921 207899064 -42788790 + MIR3 SINE MIR 43 197 -11 448 302 7 22 chr2 207899781 207899920 -42787934 - MIR SINE MIR -56 152 16 220 291 0 25 chr2 207902858 207902937 -42784917 + GA-rich Low_complexity Low_complexity 2 78 0 327 229 55 55 chr2 207903346 207903455 -42784399 + MER5B DNA MER1_type 68 176 -2 262 288 108 5 chr2 207903665 207903887 -42783967 + L1MC4a LINE L1 5707 5951 -1857 182 310 17 0 chr2 207904393 207904451 -42783403 + L2 LINE L2 3214 3272 0 1993 93 38 17 chr2 207904502 207904792 -42783062 + AluSq SINE Alu 1 296 -17 21 71 0 0 chr2 207904912 207904954 -42782900 + AT_rich Low_complexity Low_complexity 1 42 0 2093 135 0 0 chr2 207905425 207905721 -42782133 + AluSx SINE Alu 5 300 -12 232 294 59 59 chr2 207906014 207906133 -42781721 - L2 LINE L2 0 3272 3154 340 356 96 14 chr2 207906359 207906505 -42781349 + L2 LINE L2 3115 3272 0 272 274 174 16 chr2 207908929 207909119 -42778735 - L1ME LINE L1 -342 5779 5560 248 245 12 61 chr2 207909147 207909310 -42778544 - L1ME LINE L1 -2394 5414 5260 1477 156 66 0 chr2 207909491 207909735 -42778119 + AluJb SINE Alu 1 260 -52 269 26 26 0 chr2 207909763 207909801 -42778053 + (CAA)n Simple_repeat Simple_repeat 1 39 0 507 289 133 44 chr2 207909829 207910189 -42777665 - L1ME LINE L1 -1127 5019 4628 847 177 4 86 chr2 207911537 207911769 -42776085 - MER58C DNA MER1_type -1 214 2 292 296 104 8 chr2 207911893 207912053 -42775801 - MIR SINE MIR -65 197 23 241 366 40 31 chr2 207912885 207913109 -42774745 + L3b LINE CR1 1105 1330 -253 222 341 32 65 chr2 207913439 207913562 -42774292 - L2 LINE L2 -1 3271 3153 844 190 52 91 chr2 207914394 207914436 -42773418 - MIR SINE MIR -4 258 216 2415 77 0 3 chr2 207914436 207914736 -42773118 + AluY SINE Alu 1 299 -12 844 190 52 91 chr2 207914736 207914925 -42772929 - MIR SINE MIR -46 216 36 1876 159 30 0 chr2 207914984 207915286 -42772568 - AluSq SINE Alu -2 311 1 1312 177 19 19 chr2 207915393 207915658 -42772196 - Tigger5 DNA MER2_type 0 2323 2059 233 207 0 35 chr2 207915647 207915705 -42772149 - Tigger5 DNA MER2_type -2265 58 3 * 280 246 116 7 chr2 207915707 207915845 -42772009 + L1ME3A LINE L1 5800 5952 -218 1959 121 26 0 chr2 207916206 207916478 -42771376 + AluSx SINE Alu 1 279 -33 374 164 0 0 chr2 207917603 207917670 -42770184 + MER41A LTR ERV1 400 466 -88 384 280 0 0 chr2 207917700 207917807 -42770047 + L1ME1 LINE L1 3744 3850 -2296 891 203 0 0 chr2 207917807 207917955 -42769899 + FRAM SINE Alu 1 146 -30 1998 239 54 12 chr2 207917984 207918172 -42769682 + L1ME1 LINE L1 3868 4047 -2099 2299 95 14 0 chr2 207918172 207918467 -42769387 - AluSg SINE Alu -11 299 1 1998 239 54 12 chr2 207918467 207918930 -42768924 + L1ME1 LINE L1 4047 4546 -1600 1812 211 37 48 chr2 207918924 207919549 -42768305 + L1ME1 LINE L1 4773 5393 -773 * 2221 87 3 58 chr2 207919549 207919859 -42767995 + AluSg SINE Alu 3 295 -15 1812 211 37 48 chr2 207919859 207920167 -42767687 + L1ME1 LINE L1 5393 5703 -463 2328 204 34 19 chr2 207920169 207920663 -42767191 + MLT2B3 LTR ERVL 14 518 -36 207 69 0 0 chr2 207920663 207920692 -42767162 + (TA)n Simple_repeat Simple_repeat 1 29 0 2328 204 34 19 chr2 207920692 207920730 -42767124 + MLT2B3 LTR ERVL 518 554 0 1172 204 29 74 chr2 207920730 207920917 -42766937 + L1ME1 LINE L1 5715 5878 -288 15179 35 3 0 chr2 207920917 207923573 -42764281 + L1PA4 LINE L1 3516 6152 -3 1172 204 29 74 chr2 207923573 207923762 -42764092 + L1ME1 LINE L1 5878 6074 -92 23 33 0 0 chr2 207924076 207924106 -42763748 + AT_rich Low_complexity Low_complexity 1 30 0 926 111 72 0 chr2 207927755 207927908 -42759946 - Tigger4(Zombi) DNA MER2_type 0 2731 2568 * 2991 168 4 8 chr2 207927904 207928434 -42759420 - Tigger4(Zombi) DNA MER2_type -2200 531 4 340 250 24 12 chr2 207928727 207928811 -42759043 - MIR3 SINE MIR -32 176 92 1996 238 109 5 chr2 207928949 207929555 -42758299 - L1ME3A LINE L1 -9 6161 5493 2177 37 0 150 chr2 207929769 207930122 -42757732 - AluY SINE Alu -11 300 1 430 276 94 26 chr2 207930766 207930970 -42756884 - MIR SINE MIR -13 249 36 203 277 0 31 chr2 207931064 207931129 -42756725 + (TCTCTG)n Simple_repeat Simple_repeat 3 65 0 2297 98 3 3 chr2 207932300 207932597 -42755257 - AluSx SINE Alu -15 297 1 21 0 0 0 chr2 207932881 207932902 -42754952 + AT_rich Low_complexity Low_complexity 1 21 0 182 256 0 0 chr2 207933654 207933693 -42754161 - L2 LINE L2 -14 3299 3261 2288 123 42 49 chr2 207933737 207934168 -42753686 - MSTA LTR MaLR 0 428 1 2361 86 0 13 chr2 207934330 207934634 -42753220 + AluSx SINE Alu 1 300 -12 1764 137 0 32 chr2 207935006 207935291 -42752563 + AluSx SINE Alu 1 276 -36 1063 131 0 13 chr2 207935307 207935460 -42752394 + FRAM SINE Alu 1 146 -30 217 51 51 0 chr2 207935468 207935507 -42752347 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1605 189 86 9 chr2 207937433 207937772 -42750082 + MLT1A1 LTR MaLR 1 365 0 1724 140 104 68 chr2 207937869 207937923 -42749931 + MSTC LTR MaLR 1 52 -376 2155 120 3 0 chr2 207937923 207938205 -42749649 + AluSp SINE Alu 2 306 -7 244 0 0 0 chr2 207938205 207938232 -42749622 + (CAAA)n Simple_repeat Simple_repeat 2 148 0 1724 140 104 68 chr2 207938241 207938599 -42749255 + MSTC LTR MaLR 52 428 0 692 222 127 31 chr2 207938680 207939037 -42748817 - MER39 LTR ERV1 -3 666 311 1998 155 65 31 chr2 207939037 207939552 -42748302 + MLT2A2 LTR ERVL 1 554 0 590 267 245 15 chr2 207941289 207941615 -42746239 - L2 LINE L2 -3 3269 2869 1452 135 0 57 chr2 207941709 207941990 -42745864 + MER102b DNA MER1_type 51 315 -26 216 288 61 0 chr2 207941991 207942057 -42745797 - L2 LINE L2 -42 3271 3202 192 366 85 29 chr2 207942079 207942325 -42745529 - L2 LINE L2 -454 2860 2601 784 268 38 34 chr2 207943609 207943844 -42744010 - MIR SINE MIR -24 238 3 28 0 0 0 chr2 207944722 207944750 -42743104 + AT_rich Low_complexity Low_complexity 1 28 0 214 258 61 0 chr2 207944785 207944851 -42743003 + MIR SINE MIR 119 188 -74 824 184 86 0 chr2 207944988 207945140 -42742714 - MER5B DNA MER1_type -13 165 1 2216 98 6 25 chr2 207945405 207945721 -42742133 + AluSq SINE Alu 1 310 -3 7255 72 2 6 chr2 207945874 207946882 -42740972 - L1P3 LINE L1 -4734 1727 724 998 66 0 8 chr2 207946884 207947005 -42740849 + AluSg/x SINE Alu 87 206 -106 1012 206 5 5 chr2 207947034 207947243 -42740611 - MER3 DNA MER1_type 0 209 1 278 255 75 0 chr2 207947311 207947417 -42740437 - MER90 LTR ERV1 -2 612 499 2109 117 34 0 chr2 207947626 207947917 -42739937 + AluSx SINE Alu 1 301 -11 7613 22 2 0 chr2 207948950 207950324 -42737530 + L1PA4 LINE L1 4776 6151 -4 270 73 0 0 chr2 207950341 207950382 -42737472 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 715 122 0 70 chr2 207950383 207950498 -42737356 - AluJb SINE Alu -195 117 11 189 0 0 0 chr2 207951166 207951187 -42736667 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 5691 161 17 7 chr2 207951198 207953103 -42734751 - L1PB1 LINE L1 -21 6130 4212 5339 216 27 4 chr2 207953102 207953399 -42734455 - L1PB1 LINE L1 -2647 3499 3210 * 2338 106 3 0 chr2 207953399 207953711 -42734143 - AluSp SINE Alu 0 313 1 5339 216 27 4 chr2 207953711 207954765 -42733089 - L1PB1 LINE L1 -2936 3210 2118 950 164 0 0 chr2 207954765 207954934 -42732920 + AluJb SINE Alu 137 305 0 1801 160 51 3 chr2 207955475 207955769 -42732085 + AluJo SINE Alu 5 312 0 2000 167 0 0 chr2 207956594 207956893 -42730961 + AluJb SINE Alu 1 299 -13 306 282 0 0 chr2 207957863 207957948 -42729906 + MIR SINE MIR 119 203 -59 2159 223 64 34 chr2 207958030 207958572 -42729282 - MER77 LTR ERV1 -4 601 62 228 323 202 24 chr2 207958683 207958807 -42729047 - L2 LINE L2 -10 3262 3117 2082 88 11 18 chr2 207959007 207959322 -42728532 + AluSq SINE Alu 1 313 0 873 244 53 0 chr2 207959619 207959828 -42728026 - MER58A DNA MER1_type -1 223 4 1243 137 0 5 chr2 207959982 207960186 -42727668 + L1PA13 LINE L1 5961 6163 0 207 0 0 0 chr2 207960344 207960367 -42727487 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2038 127 3 14 chr2 207960369 207960660 -42727194 - AluSx SINE Alu -24 288 1 509 264 95 80 chr2 207960950 207961415 -42726439 + MLT1J LTR MaLR 36 507 -4 286 253 13 27 chr2 207962828 207962903 -42724951 - L2 LINE L2 0 3272 3199 21 0 0 0 chr2 207963139 207963160 -42724694 + AT_rich Low_complexity Low_complexity 1 21 0 180 290 108 43 chr2 207964043 207964136 -42723718 + L2 LINE L2 3174 3272 0 206 292 18 47 chr2 207964580 207964751 -42723103 + GA-rich Low_complexity Low_complexity 1 166 0 1738 191 3 7 chr2 207965005 207965308 -42722546 + AluSx SINE Alu 1 302 -10 1794 137 0 8 chr2 207965377 207965639 -42722215 - AluSx SINE Alu -18 294 35 21 0 0 0 chr2 207965686 207965707 -42722147 + AT_rich Low_complexity Low_complexity 1 21 0 247 385 86 13 chr2 207966075 207966309 -42721545 - L2 LINE L2 -2065 1249 999 530 217 86 0 chr2 207966332 207966487 -42721367 + L1ME3A LINE L1 5420 5591 -573 572 113 0 0 chr2 207966487 207966567 -42721287 - AluS SINE Alu -232 80 1 980 269 80 61 chr2 207966569 207966923 -42720931 + L1ME3A LINE L1 5577 5946 -224 2076 121 3 26 chr2 207966923 207967230 -42720624 + AluSx SINE Alu 1 300 -12 980 269 80 61 chr2 207967230 207967415 -42720439 + L1ME3A LINE L1 5946 6126 -44 3635 80 18 8 chr2 207967771 207968274 -42719580 - L1PA10 LINE L1 -5 6163 5656 2951 73 21 2 chr2 207968276 207968700 -42719154 - L1P4 LINE L1 -352 5816 5385 2173 118 3 13 chr2 207968717 207969030 -42718824 - AluSq SINE Alu -3 310 1 238 268 82 0 chr2 207969202 207969299 -42718555 - L1ME LINE L1 -304 5866 5762 1610 179 0 48 chr2 207969524 207969839 -42718015 + AluJo SINE Alu 6 306 0 391 258 136 19 chr2 207969839 207970076 -42717778 - L1ME LINE L1 -755 5391 5182 787 237 49 25 chr2 207970732 207970977 -42716877 + L1M4 LINE L1 3733 3983 -2163 746 271 132 84 chr2 207971813 207972309 -42715545 - L1ME LINE L1 -1536 4610 4072 2279 115 3 0 chr2 207972309 207972614 -42715240 + AluSx SINE Alu 1 306 -6 746 271 132 84 chr2 207972614 207972792 -42715062 - L1ME LINE L1 -2074 4072 3904 2176 107 3 7 chr2 207972926 207973217 -42714637 - AluSx SINE Alu -22 290 1 1875 147 0 27 chr2 207973405 207973718 -42714136 - AluJb SINE Alu 0 305 1 277 229 16 0 chr2 207973812 207973873 -42713981 + L2 LINE L2 3246 3307 -6 806 271 36 70 chr2 207974311 207974669 -42713185 - MLT1J1 LTR MaLR -56 390 45 643 297 49 32 chr2 207975022 207975268 -42712586 + MIR SINE MIR 8 257 -5 2189 122 0 0 chr2 207975386 207975680 -42712174 + AluSx SINE Alu 1 294 -18 342 49 49 0 chr2 207975680 207975741 -42712113 + (TA)n Simple_repeat Simple_repeat 2 65 0 786 288 52 27 chr2 207977961 207978217 -42709637 - MIR SINE MIR 0 262 6 2063 117 17 34 chr2 207978242 207978593 -42709261 + THE1B LTR MaLR 20 364 0 1660 239 103 2 chr2 207978593 207979043 -42708811 - MLT1F1 LTR MaLR -69 498 1 318 202 0 48 chr2 207979121 207979205 -42708649 - MER113 DNA MER1_type? -413 108 29 4028 178 40 21 chr2 207979418 207979464 -42708390 - L1MB7 LINE L1 -7 6177 6133 2163 128 0 0 chr2 207979464 207979761 -42708093 - AluSx SINE Alu -15 297 1 4028 178 40 21 chr2 207979761 207980671 -42707183 - L1MB7 LINE L1 -51 6133 5207 730 166 21 7 chr2 207980683 207980828 -42707026 - L1MB7 LINE L1 -1145 5001 4855 522 127 127 16 chr2 207981073 207981199 -42706655 - L1MA7 LINE L1 0 6291 6152 341 306 44 39 chr2 207981240 207981420 -42706434 + HAL1 LINE L1 878 1058 -1449 1839 246 13 30 chr2 207981420 207981857 -42705997 + L1ME1 LINE L1 4335 4759 -1387 2392 97 0 3 chr2 207981857 207982167 -42705687 + AluSq SINE Alu 1 309 -4 1839 246 13 30 chr2 207982167 207982354 -42705500 + L1ME1 LINE L1 4759 4948 -1198 618 211 0 62 chr2 207982359 207982487 -42705367 + FLAM_C SINE Alu 4 123 -20 963 246 83 0 chr2 207982501 207982777 -42705077 + L1ME1 LINE L1 5538 5836 -330 922 211 57 13 chr2 207982795 207983412 -42704442 - L1ME LINE L1 -687 5479 4619 1085 161 0 0 chr2 207983417 207983579 -42704275 + AluJb SINE Alu 136 297 -15 884 231 77 0 chr2 207983579 207983865 -42703989 - L1ME LINE L1 -1520 4626 4319 653 162 27 0 chr2 207983865 207983951 -42703903 + AluSg1 SINE Alu 1 92 -217 2340 96 3 6 chr2 207983951 207984263 -42703591 + AluSp SINE Alu 1 311 -2 653 162 27 0 chr2 207984263 207984287 -42703567 + AluSg1 SINE Alu 92 114 -195 1505 142 0 55 chr2 207984306 207984560 -42703294 + AluSg/x SINE Alu 73 312 0 1207 218 28 12 chr2 207986277 207986598 -42701256 - L1ME LINE L1 -1857 4289 3964 1743 167 0 7 chr2 207986622 207986904 -42700950 + AluJo SINE Alu 1 280 -32 2269 105 0 0 chr2 207987212 207987506 -42700348 - AluSx SINE Alu -18 294 1 868 244 136 70 chr2 207987738 207988268 -42699586 - MLT1H1 LTR MaLR -8 582 15 2159 119 0 3 chr2 207988327 207988620 -42699234 + AluSx SINE Alu 1 292 -20 255 180 0 0 chr2 207988580 207988630 -42699224 + Alu SINE Alu 251 300 0 5018 141 15 68 chr2 207988633 207988945 -42698909 - MER49 LTR ERV1 0 923 596 22 0 0 0 chr2 207988945 207988967 -42698887 + AT_rich Low_complexity Low_complexity 1 22 0 2067 108 0 73 chr2 207988967 207989283 -42698571 - AluSx SINE Alu -19 293 1 5018 141 15 68 chr2 207989283 207989679 -42698175 - MER49 LTR ERV1 -326 597 254 1768 171 3 0 chr2 207989679 207989978 -42697876 + AluJb SINE Alu 1 300 -12 5018 141 15 68 chr2 207989978 207990220 -42697634 - MER49 LTR ERV1 -669 254 1 1229 253 138 38 chr2 207991351 207991621 -42696233 + L2 LINE L2 2431 2672 -641 2163 129 0 0 chr2 207991621 207991924 -42695930 + AluSx SINE Alu 1 303 -9 1229 253 138 38 chr2 207991924 207992348 -42695506 + L2 LINE L2 2672 3231 -82 1429 170 118 7 chr2 207992348 207992619 -42695235 - AluJo SINE Alu -1 301 1 1229 253 138 38 chr2 207992619 207992697 -42695157 + L2 LINE L2 3231 3300 -13 371 287 41 16 chr2 207992792 207992914 -42694940 - L2 LINE L2 -221 3051 2927 2302 97 0 0 chr2 207993896 207994204 -42693650 + AluSx SINE Alu 1 308 -4 32 0 0 0 chr2 207994244 207994276 -42693578 + AT_rich Low_complexity Low_complexity 1 32 0 457 276 89 66 chr2 207994336 207994362 -42693492 - L1MC4a LINE L1 -347 5774 5750 2099 131 0 0 chr2 207994362 207994667 -42693187 + AluSx SINE Alu 1 305 -7 457 276 89 66 chr2 207994667 207994897 -42692957 - L1MC4a LINE L1 -371 5750 5620 1729 182 0 0 chr2 207995136 207995432 -42692422 + AluJo SINE Alu 1 296 -16 351 0 0 0 chr2 207995432 207995471 -42692383 + (GA)n Simple_repeat Simple_repeat 1 39 0 437 141 0 8 chr2 207995487 207995615 -42692239 + AluJo SINE Alu 90 312 0 30 27 0 0 chr2 207996571 207996608 -42691246 + AT_rich Low_complexity Low_complexity 1 37 0 193 183 183 33 chr2 207997249 207997309 -42690545 + L3 LINE CR1 405 473 -1104 2075 98 7 26 chr2 207997626 207997931 -42689923 + AluSx SINE Alu 1 299 -13 1274 164 49 62 chr2 207998203 207998392 -42689462 + MER33 DNA MER1_type 1 186 -2399 2587 42 0 0 chr2 207998392 207998701 -42689153 + AluY SINE Alu 1 309 -2 1274 164 49 62 chr2 207998701 207998835 -42689019 + MER33 DNA MER1_type 186 320 -4 221 303 62 68 chr2 207999397 207999559 -42688295 - MIR SINE MIR -41 221 61 326 323 8 39 chr2 208000377 208000507 -42687347 - MIR3 SINE MIR -6 202 77 2001 151 0 0 chr2 208000547 208000859 -42686995 + AluSx SINE Alu 1 312 0 1590 161 17 20 chr2 208000868 208001160 -42686694 + AluSx SINE Alu 1 291 -21 2233 85 0 13 chr2 208001172 208001478 -42686376 + AluY SINE Alu 3 304 -7 846 262 36 0 chr2 208001487 208001708 -42686146 + MIR SINE MIR 34 262 0 2002 83 3 68 chr2 208002018 208002344 -42685510 + AluSx SINE Alu 1 305 -7 1867 125 0 0 chr2 208002446 208002725 -42685129 - AluSc SINE Alu 0 309 31 408 237 119 17 chr2 208002749 208002867 -42684987 - MLT1J LTR MaLR -318 193 64 2353 80 0 6 chr2 208003065 208003376 -42684478 + AluSx SINE Alu 1 309 -3 2019 140 0 0 chr2 208004990 208005297 -42682557 - AluSx SINE Alu -5 307 1 2074 132 7 0 chr2 208005941 208006251 -42681603 - AluSp SINE Alu -1 312 1 674 232 36 0 chr2 208006647 208006819 -42681035 + MIR SINE MIR 46 227 -35 2317 94 0 0 chr2 208006864 208007172 -42680682 + AluSx SINE Alu 1 308 -4 665 236 112 11 chr2 208008791 208008969 -42678885 - MIR SINE MIR -10 252 57 2060 120 3 0 chr2 208009084 208009376 -42678478 - AluSx SINE Alu -19 293 1 1990 114 44 3 chr2 208009758 208010055 -42677799 - AluSq SINE Alu -4 309 1 1644 144 45 21 chr2 208011630 208011921 -42675933 - AluSx SINE Alu -14 298 1 2131 114 3 0 chr2 208011964 208012271 -42675583 + AluSx SINE Alu 1 308 -4 245 314 167 19 chr2 208012499 208012655 -42675199 + MIR3 SINE MIR 30 208 0 217 239 11 65 chr2 208013153 208013245 -42674609 + (CATATA)n Simple_repeat Simple_repeat 3 89 0 312 172 0 0 chr2 208017045 208017103 -42670751 + GA-rich Low_complexity Low_complexity 2 59 0 195 42 0 0 chr2 208020347 208020371 -42667483 + (GA)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr2 208021005 208021027 -42666827 + (TG)n Simple_repeat Simple_repeat 1 22 0 225 234 39 13 chr2 208026576 208026653 -42661201 + CT-rich Low_complexity Low_complexity 2 80 0 180 111 0 0 chr2 208027387 208027414 -42660440 + (TCC)n Simple_repeat Simple_repeat 1 27 0 215 283 0 0 chr2 208029088 208029134 -42658720 + C-rich Low_complexity Low_complexity 4 49 0 24 0 0 0 chr2 208030024 208030048 -42657806 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 208031388 208031409 -42656445 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 208033216 208033254 -42654600 + AT_rich Low_complexity Low_complexity 1 38 0 378 0 0 0 chr2 208034093 208034135 -42653719 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 36 0 0 chr2 208036580 208036608 -42651246 + AT_rich Low_complexity Low_complexity 1 28 0 40 37 0 0 chr2 208041048 208041102 -42646752 + AT_rich Low_complexity Low_complexity 1 54 0 279 50 0 0 chr2 208042164 208042204 -42645650 + Alu SINE Alu 261 300 -2 825 187 7 7 chr2 208042471 208042626 -42645228 - FRAM SINE Alu -11 155 1 188 154 0 51 chr2 208043093 208043132 -42644722 - MIR SINE MIR -5 257 221 30 93 0 0 chr2 208043765 208043851 -42644003 + AT_rich Low_complexity Low_complexity 1 86 0 21 36 0 0 chr2 208043951 208043979 -42643875 + AT_rich Low_complexity Low_complexity 1 28 0 2233 99 14 0 chr2 208044077 208044371 -42643483 + AluSp SINE Alu 1 298 -15 23 33 0 0 chr2 208044742 208044772 -42643082 + AT_rich Low_complexity Low_complexity 1 30 0 2108 101 0 7 chr2 208045115 208045402 -42642452 - AluSx SINE Alu -27 285 1 183 42 0 0 chr2 208045505 208045529 -42642325 + (GA)n Simple_repeat Simple_repeat 1 24 0 181 393 107 0 chr2 208046011 208046133 -42641721 + L2 LINE L2 3108 3242 -30 292 300 87 31 chr2 208046269 208046428 -42641426 + MIR SINE MIR 18 183 -64 1139 181 118 10 chr2 208046948 208047236 -42640618 - MER33 DNA MER1_type 0 324 6 441 305 40 13 chr2 208047510 208047661 -42640193 - MIR SINE MIR -57 205 51 213 299 15 0 chr2 208048260 208048327 -42639527 + CT-rich Low_complexity Low_complexity 2 69 0 204 40 0 0 chr2 208048359 208048384 -42639470 + (TC)n Simple_repeat Simple_repeat 2 26 0 237 33 0 0 chr2 208048769 208048799 -42639055 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 26 0 0 0 chr2 208048997 208049023 -42638831 + AT_rich Low_complexity Low_complexity 1 26 0 303 306 9 37 chr2 208049453 208049561 -42638293 + L2 LINE L2 3168 3272 0 2159 75 50 0 chr2 208049580 208049861 -42637993 + AluSq SINE Alu 1 295 -18 26 30 0 0 chr2 208050760 208050793 -42637061 + AT_rich Low_complexity Low_complexity 1 33 0 26 0 0 0 chr2 208055254 208055280 -42632574 + AT_rich Low_complexity Low_complexity 1 26 0 2263 90 0 0 chr2 208055306 208055596 -42632258 - AluSx SINE Alu -22 290 1 227 260 130 10 chr2 208055834 208055934 -42631920 + L1ME4a LINE L1 5940 6051 -70 1491 162 106 14 chr2 208056188 208056472 -42631382 - AluJo SINE Alu 0 312 3 945 260 22 17 chr2 208056508 208056739 -42631115 - MIR SINE MIR -17 245 14 1022 240 37 39 chr2 208057496 208057904 -42629950 - L1MC5 LINE L1 -60 7901 7495 1923 133 0 33 chr2 208058046 208058346 -42629508 + AluSx SINE Alu 1 290 -22 366 123 0 0 chr2 208058474 208058531 -42629323 + (T)n Simple_repeat Simple_repeat 1 57 0 2081 126 0 25 chr2 208058630 208058947 -42628907 + AluSx SINE Alu 4 312 0 225 222 0 32 chr2 208058966 208059029 -42628825 + CT-rich Low_complexity Low_complexity 2 62 0 230 262 0 0 chr2 208059307 208059368 -42628486 + L1MC4 LINE L1 6640 6700 -1342 647 278 17 23 chr2 208061872 208062048 -42625806 - L2 LINE L2 0 3313 3139 813 201 19 0 chr2 208062393 208062552 -42625302 - MIR SINE MIR -10 252 91 27 100 0 0 chr2 208062847 208062937 -42624917 + AT_rich Low_complexity Low_complexity 1 90 0 965 228 17 34 chr2 208064857 208065094 -42622760 - MIR SINE MIR -21 241 9 25 95 0 0 chr2 208066600 208066674 -42621180 + AT_rich Low_complexity Low_complexity 1 74 0 628 252 137 26 chr2 208066847 208067081 -42620773 + MIR SINE MIR 3 262 0 2260 90 3 7 chr2 208068060 208068077 -42619777 - AluY SINE Alu -13 298 282 327 25 0 0 chr2 208068077 208068117 -42619737 + (TG)n Simple_repeat Simple_repeat 1 40 0 2260 90 3 7 chr2 208068117 208068398 -42619456 - AluY SINE Alu -29 282 1 180 118 0 29 chr2 208071111 208071145 -42616709 - L2 LINE L2 -564 2750 2718 442 222 256 17 chr2 208071189 208071419 -42616435 - MLT1J LTR MaLR -3 508 224 323 302 87 40 chr2 208071771 208071897 -42615957 + MIR SINE MIR 20 151 -57 196 53 53 0 chr2 208072390 208072428 -42615426 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 626 284 79 22 chr2 208073464 208073693 -42614161 + MIR SINE MIR 2 243 -19 188 200 0 100 chr2 208073661 208073721 -42614133 + L2 LINE L2 3257 3310 -3 * 22 35 0 0 chr2 208074234 208074263 -42613591 + AT_rich Low_complexity Low_complexity 1 29 0 200 59 29 0 chr2 208075469 208075503 -42612351 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2448 80 3 3 chr2 208075683 208075996 -42611858 + AluSp SINE Alu 1 313 0 226 381 0 0 chr2 208076212 208076309 -42611545 - L3 LINE CR1 -51 1526 1430 187 274 84 105 chr2 208076397 208076492 -42611362 - L3 LINE CR1 -288 1289 1197 534 67 53 0 chr2 208076538 208076613 -42611241 + MADE1 DNA Mariner 1 79 -1 425 291 254 44 chr2 208076692 208077145 -42610709 - L3 LINE CR1 -590 987 440 24 0 0 0 chr2 208077274 208077298 -42610556 + AT_rich Low_complexity Low_complexity 1 24 0 281 243 24 160 chr2 208077757 208077844 -42610010 + MIR SINE MIR 53 108 -154 1533 133 130 15 chr2 208077844 208078114 -42609740 - AluSg1 SINE Alu -8 301 1 281 243 24 160 chr2 208078114 208078195 -42609659 + MIR SINE MIR 108 198 -64 1054 154 29 29 chr2 208078933 208079141 -42608713 + MER2 DNA MER2_type 2 209 -136 22 35 0 0 chr2 208079162 208079191 -42608663 + AT_rich Low_complexity Low_complexity 1 29 0 314 294 44 29 chr2 208079684 208079820 -42608034 + MER5A DNA MER1_type 50 187 -2 219 173 0 0 chr2 208081790 208081842 -42606012 + (CAATA)n Simple_repeat Simple_repeat 4 55 0 250 276 138 9 chr2 208081844 208082054 -42605800 - L1ME LINE L1 -238 5883 5647 240 268 56 0 chr2 208082454 208082525 -42605329 - L1ME3A LINE L1 -90 6080 6006 1018 132 6 36 chr2 208082576 208082743 -42605111 - AluSg/x SINE Alu -16 296 135 2382 73 0 3 chr2 208082759 208083048 -42604806 - AluSc SINE Alu -21 288 1 730 313 88 30 chr2 208083089 208083485 -42604369 + L2 LINE L2 2554 2972 -342 1997 99 46 26 chr2 208083583 208083887 -42603967 - AluSg SINE Alu 0 310 1 23 0 0 0 chr2 208083917 208083940 -42603914 + AT_rich Low_complexity Low_complexity 1 23 0 253 277 208 20 chr2 208083958 208084059 -42603795 + L2 LINE L2 3151 3270 -2 468 304 137 6 chr2 208084323 208084491 -42603363 + MIR SINE MIR 7 196 -66 321 229 60 127 chr2 208084576 208084742 -42603112 + MIR SINE MIR 95 249 -13 249 398 68 0 chr2 208084824 208084942 -42602912 - L2 LINE L2 -4 3268 3143 330 244 131 38 chr2 208085113 208085238 -42602616 + MIR SINE MIR 13 163 -99 2172 145 64 10 chr2 208085238 208085644 -42602210 + MSTA LTR MaLR 1 428 0 330 244 131 38 chr2 208085644 208085672 -42602182 + MIR SINE MIR 163 187 -75 198 0 0 0 chr2 208085849 208085871 -42601983 + (TTAAA)n Simple_repeat Simple_repeat 1 22 0 1743 179 0 3 chr2 208085874 208086164 -42601690 - AluJb SINE Alu -23 289 1 316 276 38 19 chr2 208086482 208086587 -42601267 - MIR SINE MIR -64 198 92 451 189 8 83 chr2 208086613 208086745 -42601109 - MER34C LTR ERV1 0 585 464 371 134 37 61 chr2 208086738 208086820 -42601034 - MER34 LTR ERV1 -452 90 11 * 1583 164 80 0 chr2 208087259 208087546 -42600308 - AluSx SINE Alu -2 310 1 21 0 0 0 chr2 208089294 208089315 -42598539 + AT_rich Low_complexity Low_complexity 1 21 0 185 263 0 0 chr2 208089574 208089612 -42598242 - L2 LINE L2 -20 3293 3256 306 49 0 0 chr2 208090028 208090069 -42597785 + AluSc SINE Alu 255 295 -4 204 40 0 0 chr2 208090403 208090428 -42597426 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1125 140 0 42 chr2 208090449 208090642 -42597212 - AluJo SINE Alu -127 185 1 21 0 0 0 chr2 208090887 208090908 -42596946 + AT_rich Low_complexity Low_complexity 1 21 0 219 162 0 0 chr2 208091557 208091594 -42596260 - MIR3 SINE MIR -14 194 158 213 226 0 19 chr2 208091847 208091900 -42595954 + CT-rich Low_complexity Low_complexity 3 54 0 199 200 46 77 chr2 208091905 208091970 -42595884 - L2 LINE L2 -25 3247 3185 323 331 15 23 chr2 208092406 208092539 -42595315 - MIR3 SINE MIR -54 154 23 2255 71 40 0 chr2 208093688 208093984 -42593870 - AluY SINE Alu -3 308 1 30 0 0 0 chr2 208095346 208095376 -42592478 + AT_rich Low_complexity Low_complexity 1 30 0 197 360 132 9 chr2 208096836 208096950 -42590904 + L2 LINE L2 3142 3269 -3 187 279 121 107 chr2 208097894 208098034 -42589820 + MIR3 SINE MIR 2 143 -65 411 280 170 47 chr2 208098361 208098381 -42589473 - L1M2 LINE L1 -5507 1342 1326 477 0 0 0 chr2 208098381 208098434 -42589420 + (TG)n Simple_repeat Simple_repeat 1 53 0 411 280 170 47 chr2 208098434 208098860 -42588994 - L1M2 LINE L1 -5523 1326 841 462 35 17 0 chr2 208099146 208099204 -42588650 + (TG)n Simple_repeat Simple_repeat 1 59 0 1393 174 0 8 chr2 208099580 208099816 -42588038 + MER46A DNA MER2_type 3 236 0 664 289 82 13 chr2 208099898 208100130 -42587724 - MIR SINE MIR -14 248 1 230 286 86 67 chr2 208100249 208100354 -42587500 + MIR3 SINE MIR 58 164 -44 1762 154 3 14 chr2 208100478 208100788 -42587066 + AluJb SINE Alu 1 307 0 763 293 11 5 chr2 208101101 208101289 -42586565 - MIR SINE MIR -72 190 2 859 187 170 8 chr2 208101870 208102105 -42585749 - L1ME3 LINE L1 -6 6156 5884 450 179 12 2 chr2 208102109 208102205 -42585649 + L1ME3 LINE L1 5777 5859 -305 243 0 0 0 chr2 208104697 208104724 -42583130 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1881 149 0 27 chr2 208105734 208106035 -42581819 + AluJb SINE Alu 3 295 -17 943 85 0 57 chr2 208106090 208106231 -42581623 + FLAM_C SINE Alu 1 133 0 389 235 72 52 chr2 208106250 208106403 -42581451 - MIR SINE MIR -49 213 58 338 320 153 22 chr2 208106982 208107204 -42580650 + MIR SINE MIR 12 262 0 466 297 17 53 chr2 208107739 208107939 -42579915 + MIR3 SINE MIR 6 192 -63 1880 133 3 18 chr2 208108509 208108823 -42579031 - AluSc SINE Alu 0 310 1 246 332 105 80 chr2 208109000 208109286 -42578568 + L2 LINE L2 2932 3224 -48 813 145 91 59 chr2 208109324 208109510 -42578344 - MER20 DNA MER1_type -24 195 4 223 324 0 0 chr2 208110022 208110093 -42577761 - L2 LINE L2 -9 3304 3234 186 314 116 12 chr2 208110404 208110490 -42577364 + L3 LINE CR1 964 1058 -519 2015 152 0 0 chr2 208110934 208111236 -42576618 - AluSx SINE Alu -10 302 1 1529 197 13 0 chr2 208111327 208111632 -42576222 - L1MB4 LINE L1 -2 6178 5870 312 197 0 0 chr2 208114366 208114440 -42573414 - HsTC2 DNA Tc2 -3 1895 31 189 0 0 0 chr2 208114950 208114971 -42572883 + (T)n Simple_repeat Simple_repeat 1 21 0 239 244 0 0 chr2 208115668 208115713 -42572141 - L2 LINE L2 -78 3194 3150 672 253 21 16 chr2 208117717 208117903 -42569951 + MIR SINE MIR 13 199 -63 273 29 0 0 chr2 208119465 208119499 -42568355 + (TG)n Simple_repeat Simple_repeat 1 34 0 183 42 0 0 chr2 208119746 208119770 -42568084 + (TG)n Simple_repeat Simple_repeat 2 25 0 2018 191 45 13 chr2 208122626 208123075 -42564779 - L1MA7 LINE L1 -3 6288 5826 190 235 25 86 chr2 208123667 208123748 -42564106 - L2 LINE L2 -6 3266 3191 224 365 24 101 chr2 208123799 208124224 -42563630 - L2 LINE L2 -9 3263 2872 1913 102 78 7 chr2 208124366 208124649 -42563205 + AluSg SINE Alu 1 303 -7 185 330 85 57 chr2 208126684 208126790 -42561064 + L2 LINE L2 3161 3269 -3 23 0 0 0 chr2 208127960 208127983 -42559871 + AT_rich Low_complexity Low_complexity 1 23 0 383 167 14 0 chr2 208128349 208128421 -42559433 - MER116 DNA Mariner -2 78 6 22 56 0 0 chr2 208128671 208128707 -42559147 + AT_rich Low_complexity Low_complexity 1 36 0 313 304 0 0 chr2 208128915 208128994 -42558860 + L2 LINE L2 3190 3268 -4 23 54 0 0 chr2 208129554 208129591 -42558263 + AT_rich Low_complexity Low_complexity 1 37 0 252 86 0 0 chr2 208130092 208130127 -42557727 + (T)n Simple_repeat Simple_repeat 1 35 0 225 238 95 0 chr2 208131382 208131466 -42556388 - L1MC4 LINE L1 -1337 6705 6614 290 192 0 14 chr2 208131479 208131552 -42556302 + (TA)n Simple_repeat Simple_repeat 1 72 0 2077 121 7 0 chr2 208132367 208132671 -42555183 - AluSx SINE Alu 0 306 1 277 205 8 41 chr2 208132997 208133119 -42554735 + GA-rich Low_complexity Low_complexity 2 119 0 2222 124 0 0 chr2 208133292 208133591 -42554263 + AluSx SINE Alu 1 299 -13 517 293 103 57 chr2 208133815 208134115 -42553739 + Charlie8 DNA MER1_type 11 1411 -1006 2000 108 7 17 chr2 208134573 208134860 -42552994 + AluSx SINE Alu 1 284 -28 1862 124 0 4 chr2 208135326 208135585 -42552269 + AluSq SINE Alu 43 300 -13 1522 119 37 30 chr2 208135693 208135988 -42551866 - AluSx SINE Alu -5 307 11 4726 179 87 30 chr2 208136091 208137107 -42550747 + Charlie1 DNA MER1_type 1526 2618 -143 1950 179 9 3 chr2 208137107 208137448 -42550406 - MER2 DNA MER2_type -1 343 1 4726 179 87 30 chr2 208137448 208137596 -42550258 + Charlie1 DNA MER1_type 2618 2756 -5 186 209 0 0 chr2 208138112 208138155 -42549699 + GA-rich Low_complexity Low_complexity 2 44 0 25 0 0 0 chr2 208138266 208138291 -42549563 + AT_rich Low_complexity Low_complexity 1 25 0 803 81 0 0 chr2 208139645 208139744 -42548110 - AluS SINE Alu -213 99 1 22 0 0 0 chr2 208140124 208140146 -42547708 + AT_rich Low_complexity Low_complexity 1 22 0 40 59 0 0 chr2 208142199 208142267 -42545587 + AT_rich Low_complexity Low_complexity 1 68 0 997 180 22 0 chr2 208142450 208142633 -42545221 - MER5A DNA MER1_type -1 188 2 193 338 84 0 chr2 208142655 208142726 -42545128 - L2 LINE L2 -77 3195 3119 2175 115 6 29 chr2 208143313 208143626 -42544228 + AluSx SINE Alu 1 306 -6 2487 84 0 0 chr2 208144038 208144346 -42543508 + AluSc SINE Alu 2 309 0 255 302 134 58 chr2 208144711 208145053 -42542801 - L2 LINE L2 -658 2656 2341 1200 27 60 0 chr2 208145053 208145203 -42542651 + L1PA5 LINE L1 5996 6154 0 255 302 134 58 chr2 208145203 208145734 -42542120 - L2 LINE L2 -973 2341 1717 230 0 33 0 chr2 208146212 208146242 -42541612 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 33 0 0 chr2 208147341 208147371 -42540483 + (TG)n Simple_repeat Simple_repeat 2 31 0 23 0 0 0 chr2 208147627 208147650 -42540204 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 208147757 208147784 -42540070 + AT_rich Low_complexity Low_complexity 1 27 0 371 245 139 20 chr2 208148519 208148670 -42539184 + LTR16A1 LTR ERVL 265 433 -24 2025 144 6 6 chr2 208151537 208151849 -42536005 - AluSx SINE Alu 0 312 1 2173 130 0 16 chr2 208152088 208152403 -42535451 - AluSx SINE Alu -2 310 1 440 305 241 10 chr2 208153476 208153679 -42534175 - MIR SINE MIR 0 262 13 213 318 0 0 chr2 208155958 208156021 -42531833 + L3 LINE CR1 1513 1575 -2 23 0 0 0 chr2 208156191 208156214 -42531640 + AT_rich Low_complexity Low_complexity 1 23 0 2089 134 0 0 chr2 208161867 208162202 -42525652 - AluSx SINE Alu 0 312 1 2145 126 0 3 chr2 208163002 208163303 -42524551 - AluSx SINE Alu -12 300 1 470 247 165 6 chr2 208164649 208164807 -42523047 - MIR SINE MIR -1 261 79 641 309 48 8 chr2 208165096 208165345 -42522509 + MIR SINE MIR 4 262 0 303 28 0 0 chr2 208167020 208167056 -42520798 + (TG)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr2 208167746 208167768 -42520086 + AT_rich Low_complexity Low_complexity 1 22 0 198 208 0 0 chr2 208168928 208168976 -42518878 + (TG)n Simple_repeat Simple_repeat 2 49 0 228 234 0 0 chr2 208168980 208169044 -42518810 + L1MC4 LINE L1 6640 6703 -1339 436 239 6 17 chr2 208169096 208169276 -42518578 + (TA)n Simple_repeat Simple_repeat 2 179 0 23 0 0 0 chr2 208170782 208170805 -42517049 + AT_rich Low_complexity Low_complexity 1 23 0 292 197 0 15 chr2 208172351 208172417 -42515437 - MER96 DNA MER1_type? 0 175 111 201 211 0 0 chr2 208172798 208172850 -42515004 + (TATG)n Simple_repeat Simple_repeat 3 54 0 24 32 0 0 chr2 208174307 208174338 -42513516 + AT_rich Low_complexity Low_complexity 1 31 0 382 344 128 53 chr2 208175333 208175763 -42512091 - L2 LINE L2 -5 3267 2806 1708 210 34 63 chr2 208176336 208176893 -42510961 - L1MD3 LINE L1 -5 7990 7450 428 312 51 27 chr2 208176966 208177134 -42510720 - MIR3 SINE MIR -10 198 23 357 125 0 0 chr2 208181143 208181199 -42506655 + (TG)n Simple_repeat Simple_repeat 1 56 0 274 196 49 69 chr2 208184182 208184238 -42503616 + Charlie8 DNA MER1_type 38 93 -248 1167 99 35 0 chr2 208184238 208184410 -42503444 - L1PA13 LINE L1 -5 6158 5981 274 196 49 69 chr2 208184410 208184455 -42503399 + Charlie8 DNA MER1_type 93 137 -204 36 0 0 0 chr2 208184701 208184737 -42503117 + AT_rich Low_complexity Low_complexity 1 36 0 821 218 30 5 chr2 208185100 208185302 -42502552 + MER106A DNA MER1_type 29 235 -1 235 248 139 36 chr2 208185532 208185669 -42502185 - MIR SINE MIR -98 164 14 1028 180 36 5 chr2 208186024 208186218 -42501636 + MER20 DNA MER1_type 1 200 -19 230 231 0 31 chr2 208186328 208186393 -42501461 + CT-rich Low_complexity Low_complexity 2 64 0 290 287 156 30 chr2 208186441 208186608 -42501246 - MIR SINE MIR -56 206 19 285 75 0 0 chr2 208189684 208189724 -42498130 + (TCCC)n Simple_repeat Simple_repeat 2 41 0 337 316 32 0 chr2 208190164 208190259 -42497595 - L2 LINE L2 0 3313 3216 206 331 19 64 chr2 208191513 208191670 -42496184 + MIR3 SINE MIR 2 151 -57 23 0 0 0 chr2 208192741 208192764 -42495090 + AT_rich Low_complexity Low_complexity 1 23 0 205 290 194 11 chr2 208193062 208193155 -42494699 + MIR SINE MIR 21 130 -78 1885 154 0 28 chr2 208193156 208193475 -42494379 - AluJb SINE Alu 0 312 3 606 261 39 30 chr2 208194304 208194507 -42493347 - MER63A DNA MER1_type -5 205 1 27 0 0 0 chr2 208196355 208196382 -42491472 + AT_rich Low_complexity Low_complexity 1 27 0 2216 113 7 0 chr2 208197945 208198255 -42489599 - AluSx SINE Alu 0 312 1 330 347 35 55 chr2 208199481 208199680 -42488174 - L2 LINE L2 -39 3233 3039 354 383 9 9 chr2 208199929 208200151 -42487703 - L2 LINE L2 -671 2643 2422 670 226 66 0 chr2 208203251 208203432 -42484422 + Charlie1a DNA MER1_type 59 251 -1204 2305 85 0 23 chr2 208203460 208203765 -42484089 + AluY SINE Alu 1 298 -13 349 254 101 74 chr2 208204175 208204364 -42483490 - MIR SINE MIR -2 260 67 2499 81 0 0 chr2 208204667 208204974 -42482880 + AluY SINE Alu 1 307 -4 270 81 0 0 chr2 208205562 208205599 -42482255 + (CA)n Simple_repeat Simple_repeat 2 38 0 587 101 0 0 chr2 208205602 208205681 -42482173 - AluSg/x SINE Alu -18 294 216 6603 58 10 0 chr2 208205781 208206653 -42481201 - MER11B LTR ERVK -355 881 1 1398 107 0 0 chr2 208206653 208206831 -42481023 - AluSx SINE Alu -134 178 1 759 211 72 5 chr2 208208197 208208391 -42479463 + MER3 DNA MER1_type 3 209 0 478 325 127 4 chr2 208208391 208208643 -42479211 + L2 LINE L2 2872 3154 -159 559 297 51 62 chr2 208208709 208208965 -42478889 + MIR SINE MIR 2 254 -8 1128 231 88 72 chr2 208209355 208209841 -42478013 - L1ME3 LINE L1 -14 6148 5655 21 36 0 0 chr2 208210121 208210149 -42477705 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr2 208210312 208210333 -42477521 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 366 280 47 0 chr2 208211205 208211312 -42476542 + MIR SINE MIR 151 262 0 522 203 222 0 chr2 208213302 208213465 -42474389 + MER58B DNA MER1_type 9 341 0 600 270 108 4 chr2 208213473 208213682 -42474172 - MIR SINE MIR -37 225 3 205 76 13 114 chr2 208214546 208214625 -42473229 + (TTTTTG)n Simple_repeat Simple_repeat 2 72 0 207 146 0 0 chr2 208214881 208214922 -42472932 + (TA)n Simple_repeat Simple_repeat 2 42 0 228 392 58 17 chr2 208218442 208218562 -42469292 - L2 LINE L2 -11 3261 3137 1321 133 37 141 chr2 208218969 208219323 -42468531 + MER2 DNA MER2_type 1 317 -28 250 206 37 103 chr2 208219355 208219462 -42468392 - MLT1J1 LTR MaLR -346 100 1 398 296 96 0 chr2 208220517 208220652 -42467202 + MIR SINE MIR 28 175 -87 831 130 0 23 chr2 208222141 208222272 -42465582 + AluJo SINE Alu 3 130 -172 227 358 0 11 chr2 208222525 208222620 -42465234 + CT-rich Low_complexity Low_complexity 2 95 0 850 269 138 14 chr2 208222723 208223158 -42464696 + L2 LINE L2 2025 2513 -801 4641 57 20 6 chr2 208223158 208224273 -42463581 - MER11A LTR ERVK 0 1266 1 1157 231 221 17 chr2 208224273 208224865 -42462989 + L2 LINE L2 2508 3215 -98 404 329 134 0 chr2 208225136 208225300 -42462554 - L3 LINE CR1 0 1577 1392 248 256 22 131 chr2 208225308 208225445 -42462409 - L3 LINE CR1 -574 1003 882 * 632 302 22 58 chr2 208225427 208225652 -42462202 + L3 LINE CR1 951 1167 -410 954 285 152 17 chr2 208225759 208226239 -42461615 - LTR67 LTR ERVL -6 551 7 234 0 0 0 chr2 208226420 208226446 -42461408 + (TG)n Simple_repeat Simple_repeat 1 26 0 784 206 0 35 chr2 208227510 208227680 -42460174 + AluJo SINE Alu 137 300 -2 372 232 12 0 chr2 208230256 208230338 -42457516 + MER3 DNA MER1_type 1 83 -126 271 179 71 0 chr2 208230341 208230357 -42457497 + MER53 DNA DNA 1 14 -175 180 0 0 0 chr2 208230357 208230377 -42457477 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 271 179 71 0 chr2 208230377 208230444 -42457410 + MER53 DNA DNA 14 90 -99 * 336 173 62 0 chr2 208230380 208230461 -42457393 - MER53 DNA DNA -11 178 93 289 271 169 0 chr2 208230977 208231143 -42456711 - LTR33 LTR ERVL 0 521 328 466 270 44 13 chr2 208231225 208231384 -42456470 - LTR33 LTR ERVL -357 164 1 449 256 160 0 chr2 208232211 208232367 -42455487 + MIR SINE MIR 82 262 0 2291 64 0 3 chr2 208232506 208232813 -42455041 - AluY SINE Alu 0 306 1 566 197 49 0 chr2 208232959 208233081 -42454773 - MER63 DNA MER1_type -5 1057 930 * 588 213 125 0 chr2 208233079 208233215 -42454639 - MER63 DNA MER1_type -57 779 1 207 0 0 0 chr2 208233960 208233983 -42453871 + (TG)n Simple_repeat Simple_repeat 1 23 0 2878 72 0 7 chr2 208234032 208234447 -42453407 - LTR7 LTR ERV1 -38 412 1 2305 85 45 16 chr2 208234447 208234824 -42453030 - HERVH LTR ERV1 0 7713 7326 1180 142 32 27 chr2 208234826 208235045 -42452809 - HERVH LTR ERV1 -1894 5819 5600 4027 149 1 1 chr2 208235046 208235708 -42452146 - HERVH LTR ERV1 -2564 5149 4488 3184 111 0 4 chr2 208235710 208236206 -42451648 - HERVH LTR ERV1 -3720 3993 3500 795 169 20 0 chr2 208236205 208236353 -42451501 - HERVH LTR ERV1 -4423 3290 3140 * 19173 95 15 13 chr2 208236347 208239327 -42448527 - HERVH LTR ERV1 -4726 2987 1 711 75 0 19 chr2 208239329 208239435 -42448419 - LTR7 LTR ERV1 -2 448 345 512 219 124 24 chr2 208239804 208239973 -42447881 + MIR SINE MIR 42 227 -35 196 354 24 0 chr2 208239981 208240063 -42447791 - MIR SINE MIR -15 247 164 365 290 0 16 chr2 208240082 208240206 -42447648 + L1MC2 LINE L1 174 295 -6269 1813 271 20 52 chr2 208240297 208240949 -42446905 + L1MC2 LINE L1 132 762 -5283 22810 72 9 5 chr2 208240954 208247072 -42440782 + L1PA6 LINE L1 11 6153 -1 2866 229 85 12 chr2 208247067 208248029 -42439825 + L1MC2 LINE L1 744 1635 -4929 * 185 83 28 0 chr2 208248029 208248065 -42439789 + (CAA)n Simple_repeat Simple_repeat 1 37 0 2866 229 85 12 chr2 208248065 208248692 -42439162 + L1MC2 LINE L1 1635 2542 -4022 2298 113 53 0 chr2 208248696 208249033 -42438821 - THE1A LTR MaLR 0 355 1 1316 180 69 3 chr2 208249041 208249247 -42438607 - Tigger3(Golem) DNA MER2_type 0 3028 2796 830 122 0 23 chr2 208249247 208249378 -42438476 + L1PA8 LINE L1 6036 6163 -9 1316 180 69 3 chr2 208249378 208249460 -42438394 - Tigger3(Golem) DNA MER2_type -232 2796 2721 244 240 0 0 chr2 208249458 208249508 -42438346 - Tigger3(Golem) DNA MER2_type -2947 82 33 * 9129 228 41 19 chr2 208249510 208253490 -42434364 + L1MC2 LINE L1 2549 6761 -1 187 279 0 144 chr2 208253501 208253612 -42434242 - MIR SINE MIR -66 142 48 11797 163 14 12 chr2 208253648 208255538 -42432316 + L1P4 LINE L1 2360 4256 -1890 1827 177 0 32 chr2 208255538 208255849 -42432005 - AluSx SINE Alu -11 301 1 11797 163 14 12 chr2 208255849 208256255 -42431599 + L1P4 LINE L1 4256 4660 -1486 2006 176 57 0 chr2 208256255 208256590 -42431264 + LTR18A LTR ERVL 4 357 0 33362 168 9 10 chr2 208256596 208262577 -42425277 + HERVL18 LTR ERVL 1 6047 0 1720 181 137 0 chr2 208262578 208262892 -42424962 + LTR18A LTR ERVL 1 357 0 3725 123 5 50 chr2 208262892 208263890 -42423964 + L1P4 LINE L1 4667 5639 -529 353 246 144 8 chr2 208263999 208264117 -42423737 - L1M LINE L1 -774 5388 5255 3764 237 37 16 chr2 208264255 208265609 -42422245 - L1MEc LINE L1 -923 5292 3867 236 135 39 45 chr2 208265704 208265860 -42421994 + (TA)n Simple_repeat Simple_repeat 2 156 0 279 267 8 8 chr2 208265885 208266016 -42421838 + (TA)n Simple_repeat Simple_repeat 1 131 0 1222 213 115 38 chr2 208266127 208266606 -42421248 + L1ME2 LINE L1 5595 6110 -54 3170 91 2 7 chr2 208266617 208267067 -42420787 + LTR7 LTR ERV1 1 448 -2 14853 85 28 11 chr2 208267069 208269299 -42418555 + HERVH LTR ERV1 1 2267 -5446 2862 80 3 0 chr2 208269400 208269777 -42418077 + L1PA12 LINE L1 5791 6168 0 252 239 45 45 chr2 208269859 208269947 -42417907 - MER5B DNA MER1_type -89 89 2 1675 156 25 44 chr2 208270134 208270449 -42417405 + AluJo SINE Alu 1 309 -3 377 241 78 43 chr2 208270598 208270739 -42417115 - L2 LINE L2 -1 3312 3167 879 210 11 0 chr2 208271700 208271876 -42415978 + MER5B DNA MER1_type 1 178 0 180 267 0 0 chr2 208272562 208272607 -42415247 - MIR SINE MIR -108 154 110 456 301 70 45 chr2 208273944 208274015 -42413839 + MIR SINE MIR 28 96 -166 2676 142 14 0 chr2 208274015 208274437 -42413417 - MSTA LTR MaLR 0 428 1 456 301 70 45 chr2 208274437 208274564 -42413290 + MIR SINE MIR 96 231 -31 268 255 131 42 chr2 208274931 208275190 -42412664 - L1MEc LINE L1 -2636 3579 3298 245 274 140 57 chr2 208275184 208275820 -42412034 - L1MEc LINE L1 -5013 1383 695 * 367 256 43 17 chr2 208276350 208276467 -42411387 - L1MEc LINE L1 -5888 317 198 6432 126 58 25 chr2 208276581 208277230 -42410624 - Tigger3b DNA MER2_type -1807 1221 595 309 51 0 0 chr2 208277230 208277269 -42410585 + (CA)n Simple_repeat Simple_repeat 2 40 0 6432 126 58 25 chr2 208277269 208277485 -42410369 - Tigger3b DNA MER2_type -2433 595 388 3717 94 43 5 chr2 208277485 208278060 -42409794 - L1PB2 LINE L1 -2 6149 5553 6432 126 58 25 chr2 208278060 208278373 -42409481 - Tigger3b DNA MER2_type -2640 388 3 183 355 92 14 chr2 208278524 208278665 -42409189 + L2 LINE L2 2344 2495 -819 273 253 13 40 chr2 208278675 208278823 -42409031 + MIR SINE MIR 19 260 -2 360 356 59 39 chr2 208278875 208279232 -42408622 + L2 LINE L2 2540 2903 -411 497 234 80 18 chr2 208279383 208279609 -42408245 + L1M4 LINE L1 3185 3424 -2722 782 139 165 0 chr2 208279640 208279798 -42408056 - L1PB1 LINE L1 0 6151 5968 490 271 85 0 chr2 208279835 208280023 -42407831 + L1M4 LINE L1 3440 3643 -2503 * 1897 255 102 60 chr2 208280022 208281933 -42405921 - L1MCc LINE L1 -4863 2078 102 186 340 58 19 chr2 208282464 208282567 -42405287 + L2 LINE L2 2279 2385 -929 2279 122 33 25 chr2 208282698 208283059 -42404795 - THE1B LTR MaLR 0 364 1 244 319 14 0 chr2 208283373 208283445 -42404409 + L2 LINE L2 3200 3272 0 324 0 0 0 chr2 208283796 208283832 -42404022 + (TG)n Simple_repeat Simple_repeat 1 36 0 300 346 52 22 chr2 208284999 208285135 -42402719 - L2 LINE L2 -31 3241 3102 22796 92 7 3 chr2 208286936 208289768 -42398086 - L1P LINE L1 -844 5302 2454 405 0 0 0 chr2 208289768 208289813 -42398041 + (TA)n Simple_repeat Simple_repeat 2 46 0 22796 92 7 3 chr2 208289813 208290420 -42397434 - L1P LINE L1 -3692 2454 1851 3292 51 0 2 chr2 208290420 208290830 -42397024 - L1PA5 LINE L1 -1 6153 5745 489 270 25 5 chr2 208290846 208291046 -42396808 - L1M4 LINE L1 -3382 2764 2561 209 171 0 0 chr2 208293067 208293102 -42394752 + CT-rich Low_complexity Low_complexity 1 35 0 250 234 62 16 chr2 208293209 208293273 -42394581 - MIR SINE MIR -90 172 106 942 180 22 27 chr2 208294433 208294616 -42393238 + MER20 DNA MER1_type 38 219 0 1361 177 27 108 chr2 208294780 208295187 -42392667 - MLT1A2 LTR MaLR 0 374 1 765 182 62 53 chr2 208295760 208295969 -42391885 + L1MB8 LINE L1 5962 6172 -6 380 317 31 12 chr2 208297169 208297330 -42390524 - L1MC4 LINE L1 -89 7953 7790 300 53 0 0 chr2 208298387 208298425 -42389429 + (TG)n Simple_repeat Simple_repeat 1 38 0 343 350 85 15 chr2 208298666 208298866 -42388988 + L3 LINE CR1 1186 1399 -178 939 233 20 21 chr2 208298888 208299158 -42388696 - L1ME3 LINE L1 -8 6154 5880 6321 135 31 7 chr2 208299163 208300875 -42386979 - L1MA1 LINE L1 -5 6297 4543 1852 158 0 0 chr2 208301110 208301383 -42386471 + AluSx SINE Alu 1 273 -39 198 0 0 0 chr2 208301383 208301405 -42386449 + (TC)n Simple_repeat Simple_repeat 2 23 0 356 214 0 68 chr2 208301413 208301516 -42386338 - L1MC4 LINE L1 -1339 6703 6608 854 232 94 14 chr2 208301730 208302006 -42385848 - MLT1C LTR MaLR -76 391 94 2523 157 30 28 chr2 208303478 208304618 -42383236 - L1MA10 LINE L1 0 6334 5089 8383 183 14 29 chr2 208304618 208306439 -42381415 + L1 LINE L1 3209 5002 -1144 549 256 15 15 chr2 208306441 208306574 -42381280 - MIR SINE MIR -98 164 32 430 336 21 7 chr2 208306620 208306760 -42381094 + MIR SINE MIR 4 145 -117 394 249 104 46 chr2 208307819 208307992 -42379862 - MIR SINE MIR -67 195 13 202 348 85 12 chr2 208308250 208308414 -42379440 - L2 LINE L2 -554 2760 2585 4385 111 11 1 chr2 208308634 208309285 -42378569 + L1PA13 LINE L1 5507 6163 0 458 302 42 45 chr2 208309578 208309843 -42378011 - L2 LINE L2 -657 2657 2394 257 294 26 33 chr2 208309921 208310074 -42377780 - L2 LINE L2 -918 2396 2245 29 28 0 0 chr2 208310360 208310396 -42377458 + AT_rich Low_complexity Low_complexity 1 36 0 216 0 0 0 chr2 208310490 208310514 -42377340 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 216 286 0 14 chr2 208310574 208310644 -42377210 - L2 LINE L2 -87 3226 3158 21 36 0 0 chr2 208312290 208312318 -42375536 + AT_rich Low_complexity Low_complexity 1 28 0 582 240 53 0 chr2 208312889 208313039 -42374815 - MIR SINE MIR -5 257 100 24 0 0 0 chr2 208313340 208313364 -42374490 + AT_rich Low_complexity Low_complexity 1 24 0 235 204 23 0 chr2 208314218 208314262 -42373592 + HAL1 LINE L1 1315 1359 -1148 260 299 144 65 chr2 208314391 208314669 -42373185 - L2 LINE L2 -39 3233 2934 612 201 134 7 chr2 208314798 208314947 -42372907 - MIR SINE MIR -74 188 21 4289 166 15 4 chr2 208315331 208315939 -42371915 - L1 LINE L1 -1570 4576 3955 2287 95 0 7 chr2 208315939 208316243 -42371611 - AluSc SINE Alu -7 302 1 4289 166 15 4 chr2 208316243 208316430 -42371424 - L1 LINE L1 -2191 3955 3772 809 111 67 15 chr2 208317173 208317308 -42370546 - MSTC LTR MaLR -7 421 280 451 241 0 0 chr2 208317308 208317467 -42370387 - L1PA8A LINE L1 0 6131 6019 255 33 0 0 chr2 208317467 208317497 -42370357 - L1PA2 LINE L1 -115 6040 6011 1721 125 66 28 chr2 208317497 208317784 -42370070 - MSTC LTR MaLR -130 298 1 183 287 103 35 chr2 208317927 208318014 -42369840 - L2 LINE L2 -527 2787 2695 594 0 0 0 chr2 208318118 208318184 -42369670 + (GAAA)n Simple_repeat Simple_repeat 1 66 0 458 283 22 57 chr2 208318219 208318427 -42369427 + MIR SINE MIR 23 223 -39 191 256 182 40 chr2 208318483 208318659 -42369195 - L2 LINE L2 -778 2536 2336 302 287 11 0 chr2 208318668 208318762 -42369092 - MLT-int LTR MaLR -965 770 676 307 206 0 0 chr2 208318823 208318886 -42368968 - MLT1-int LTR MaLR -484 887 825 * 1538 192 72 0 chr2 208318878 208319185 -42368669 - MLT1-int LTR MaLR -662 709 381 2266 153 38 19 chr2 208320989 208321407 -42366447 - MSTB LTR MaLR 0 426 1 1736 152 8 102 chr2 208321851 208322233 -42365621 - MLT1B LTR MaLR -44 346 1 568 256 15 15 chr2 208323628 208323761 -42364093 + MIR SINE MIR 8 140 -122 2208 203 65 55 chr2 208324292 208324943 -42362911 - MER67B LTR ERV1 0 661 5 452 116 11 105 chr2 208324943 208325038 -42362816 - MER67A LTR ERV1 -457 86 1 327 273 159 15 chr2 208325095 208325227 -42362627 - L2 LINE L2 0 3313 3163 23 0 0 0 chr2 208325247 208325270 -42362584 + AT_rich Low_complexity Low_complexity 1 23 0 456 286 77 29 chr2 208325393 208325666 -42362188 + L1ME LINE L1 5517 5802 -319 1890 153 55 0 chr2 208325724 208326050 -42361804 - MER7A DNA MER2_type -3 343 2 180 0 0 0 chr2 208326587 208326607 -42361247 + (TG)n Simple_repeat Simple_repeat 1 20 0 2248 92 3 32 chr2 208326967 208327281 -42360573 + AluSc SINE Alu 1 305 -4 201 74 0 0 chr2 208327379 208327406 -42360448 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 219 139 0 0 chr2 208328231 208328267 -42359587 + (TA)n Simple_repeat Simple_repeat 2 37 0 353 167 17 0 chr2 208328288 208328348 -42359506 - U7 snRNA snRNA -1 62 2 188 342 25 13 chr2 208328695 208328774 -42359080 - L2 LINE L2 0 3272 3193 575 151 0 0 chr2 208328809 208328895 -42358959 + AluJ/FLAM SINE Alu 2 87 -225 242 28 0 28 chr2 208328917 208328953 -42358901 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 240 268 0 0 chr2 208328958 208329014 -42358840 + MIR SINE MIR 199 254 -8 1732 133 4 4 chr2 208329057 208329320 -42358534 + AluY SINE Alu 49 311 0 529 219 62 0 chr2 208329329 208329457 -42358397 - MLT1J LTR MaLR -374 137 2 204 319 82 28 chr2 208329478 208329660 -42358194 - L3 LINE CR1 -421 1156 965 1053 87 0 0 chr2 208329976 208330114 -42357740 + MLT2A1 LTR ERVL 1 138 -306 261 0 0 0 chr2 208330220 208330249 -42357605 + (TA)n Simple_repeat Simple_repeat 2 30 0 2141 165 31 11 chr2 208330289 208330671 -42357183 + MLT1B LTR MaLR 1 390 0 1048 135 42 92 chr2 208330862 208331122 -42356732 - L1MB7 LINE L1 0 6184 5938 2111 107 0 36 chr2 208331509 208331817 -42356037 - AluSg SINE Alu -13 297 1 189 0 0 0 chr2 208333405 208333426 -42354428 + (T)n Simple_repeat Simple_repeat 1 21 0 3201 77 23 7 chr2 208333569 208334010 -42353844 - LTR7 LTR ERV1 -2 448 1 2416 102 42 13 chr2 208334010 208334391 -42353463 - HERVH LTR ERV1 0 7713 7322 1374 139 19 0 chr2 208334389 208334605 -42353249 - HERVH LTR ERV1 -1894 5819 5600 * 8553 102 2 7 chr2 208334609 208336335 -42351519 - HERVH LTR ERV1 -1818 5273 3492 876 142 7 0 chr2 208336327 208336475 -42351379 - HERVH LTR ERV1 -4425 3288 3140 * 4022 85 2 23 chr2 208336454 208337057 -42350797 - HERVH LTR ERV1 -4718 2995 2406 23 33 0 0 chr2 208337497 208337527 -42350327 + AT_rich Low_complexity Low_complexity 1 30 0 529 311 35 87 chr2 208338043 208338468 -42349386 - L2 LINE L2 -7 3265 2863 414 268 0 32 chr2 208338476 208338494 -42349360 - MIR SINE MIR -65 197 180 1620 201 37 14 chr2 208338494 208338847 -42349007 - MLT1A1 LTR MaLR 0 365 5 414 268 0 32 chr2 208338847 208338951 -42348903 - MIR SINE MIR -82 180 79 1409 224 7 17 chr2 208339324 208339623 -42348231 - AluJo SINE Alu -16 296 1 2433 191 84 75 chr2 208342184 208342970 -42344884 + L1ME2 LINE L1 5341 6133 -31 1218 156 80 23 chr2 208343669 208343932 -42343922 + L1MB8 LINE L1 5900 6177 -1 212 253 80 13 chr2 208344341 208344416 -42343438 + L2 LINE L2 3185 3264 -8 466 265 172 5 chr2 208344566 208344770 -42343084 + MIR SINE MIR 25 262 0 24 53 0 0 chr2 208344935 208344973 -42342881 + AT_rich Low_complexity Low_complexity 1 38 0 371 284 172 9 chr2 208345014 208345246 -42342608 + L1MD1 LINE L1 5120 5389 -757 4464 236 39 34 chr2 208345332 208345679 -42342175 + L1M4 LINE L1 2695 3039 -3107 2058 111 7 0 chr2 208345679 208345959 -42341895 + AluSx SINE Alu 1 330 0 285 62 0 21 chr2 208345959 208346007 -42341847 + (TAAAA)n Simple_repeat Simple_repeat 4 90 0 4464 236 39 34 chr2 208346007 208347088 -42340766 + L1M4 LINE L1 3039 4130 -2016 2392 194 33 6 chr2 208347089 208347600 -42340254 + L1MD1 LINE L1 5708 6232 -10 1736 160 33 0 chr2 208347766 208347927 -42339927 - AluSx SINE Alu -24 288 113 186 43 0 0 chr2 208347927 208347950 -42339904 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 1736 160 33 0 chr2 208347950 208348063 -42339791 - AluSx SINE Alu -199 113 5 314 301 128 48 chr2 208348063 208348347 -42339507 + L1ME4a LINE L1 5595 5901 -220 338 296 42 7 chr2 208348623 208348765 -42339089 - MIR SINE MIR -56 206 60 214 391 18 18 chr2 208350058 208350168 -42337686 - L2 LINE L2 -337 2976 2867 434 249 115 61 chr2 208350190 208350355 -42337499 + MER5A DNA MER1_type 10 183 -6 582 306 193 23 chr2 208350408 208351261 -42336593 - L2 LINE L2 -531 2783 1786 273 203 101 43 chr2 208351266 208351335 -42336519 + MER5A DNA MER1_type 1 73 -116 40 37 0 0 chr2 208351443 208351497 -42336357 + AT_rich Low_complexity Low_complexity 1 54 0 1878 264 126 17 chr2 208351498 208351876 -42335978 - L1ME3A LINE L1 -23 6147 5812 364 33 333 0 chr2 208351876 208351936 -42335918 - MADE1 DNA Mariner 0 80 1 1878 264 126 17 chr2 208351936 208352325 -42335529 - L1ME3A LINE L1 -358 5812 5296 197 262 0 66 chr2 208353779 208353840 -42334014 + MIR SINE MIR 51 107 -155 197 347 14 0 chr2 208353883 208353955 -42333899 + MIR SINE MIR 185 257 -5 452 290 0 37 chr2 208354041 208354148 -42333706 - MIR SINE MIR -76 132 30 21713 151 16 14 chr2 208354958 208359804 -42328050 - L1P3 LINE L1 -1485 4976 2 854 263 37 5 chr2 208359960 208360177 -42327677 - MIR SINE MIR -21 241 18 352 290 84 15 chr2 208360337 208360468 -42327386 - L2 LINE L2 -6 3307 3168 243 187 0 55 chr2 208360928 208361019 -42326835 + GA-rich Low_complexity Low_complexity 1 86 0 329 297 7 14 chr2 208362416 208362560 -42325294 - LTR16C LTR ERVL 0 468 314 1002 182 0 0 chr2 208362891 208363067 -42324787 + MER105 DNA DNA 29 204 0 410 291 63 82 chr2 208363069 208363337 -42324517 - LTR16C LTR ERVL -228 263 1 749 373 55 25 chr2 208363697 208364292 -42323562 - ERVL LTR ERVL -641 5123 4511 26 30 0 0 chr2 208364671 208364704 -42323150 + AT_rich Low_complexity Low_complexity 1 33 0 245 226 179 36 chr2 208366211 208366295 -42321559 - MLT1I LTR MaLR -33 376 281 229 299 0 26 chr2 208366442 208366519 -42321335 - MLT1I LTR MaLR -262 147 73 2049 160 25 0 chr2 208366750 208367107 -42320747 + MER47A DNA MER2_type 1 366 0 1393 206 93 108 chr2 208367107 208367707 -42320147 - MLT1E LTR MaLR 0 593 1 6250 133 46 25 chr2 208369459 208370875 -42316979 - L1MC1 LINE L1 0 6333 4890 1509 196 43 50 chr2 208370910 208371309 -42316545 + MSTD LTR MaLR 1 396 0 2428 221 10 2 chr2 208371310 208371812 -42316042 + MSTD-int LTR MaLR 1 506 -1229 * 4338 211 98 34 chr2 208371811 208372841 -42315013 + MSTD-int LTR MaLR 640 1735 0 1396 206 133 36 chr2 208372841 208373201 -42314653 + MSTD LTR MaLR 1 395 -1 263 319 56 19 chr2 208374078 208374238 -42313616 - L1MC4a LINE L1 -1565 6243 6078 311 221 12 0 chr2 208374443 208374529 -42313325 + (TA)n Simple_repeat Simple_repeat 2 88 0 605 240 35 30 chr2 208374541 208374774 -42313080 - L1MC4a LINE L1 -341 5827 5673 270 231 75 27 chr2 208375162 208375261 -42312593 + MIR SINE MIR 64 167 -41 300 266 18 62 chr2 208375536 208375649 -42312205 - MER102a DNA MER1_type 0 330 223 565 307 21 37 chr2 208376613 208376854 -42311000 + MLT1I LTR MaLR 32 268 -141 1458 168 44 50 chr2 208377945 208378242 -42309612 - AluJo SINE Alu -2 310 16 340 335 77 23 chr2 208378593 208378814 -42309040 + L1ME4a LINE L1 5672 5904 -217 211 337 138 65 chr2 208378950 208379507 -42308347 + L2 LINE L2 2238 2856 -458 2053 111 4 4 chr2 208379507 208379786 -42308068 - AluSq SINE Alu -12 301 23 211 337 138 65 chr2 208379786 208379917 -42307937 + L2 LINE L2 2856 2976 -338 568 248 7 48 chr2 208379996 208380141 -42307713 + L2 LINE L2 3173 3311 -2 21 36 0 0 chr2 208380347 208380375 -42307479 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 208381292 208381315 -42306539 + (TA)n Simple_repeat Simple_repeat 2 24 0 345 257 55 55 chr2 208381413 208381615 -42306239 - L1ME4a LINE L1 -230 5891 5690 548 262 131 12 chr2 208381640 208381808 -42306046 - MER5A DNA MER1_type 0 189 2 415 287 17 9 chr2 208381821 208381936 -42305918 - L1ME4a LINE L1 -473 5648 5533 308 250 61 45 chr2 208381990 208382122 -42305732 + L1ME LINE L1 5691 5824 -338 270 287 40 10 chr2 208382479 208382580 -42305274 - L1ME4a LINE L1 -669 5452 5349 1342 239 129 24 chr2 208382872 208383329 -42304525 + MLT1D LTR MaLR 1 505 0 4513 262 57 25 chr2 208383984 208385010 -42302844 - L1MD2 LINE L1 -24 6335 5343 958 169 0 13 chr2 208385010 208385164 -42302690 - FRAM SINE Alu -14 152 1 4513 262 57 25 chr2 208385164 208386954 -42300900 - L1MD2 LINE L1 -1016 5343 3416 219 36 0 0 chr2 208386956 208386984 -42300870 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 3061 88 2 0 chr2 208386987 208387406 -42300448 - L1PA7 LINE L1 -16 6138 5719 375 108 27 14 chr2 208387406 208387480 -42300374 + L1P LINE L1 4740 4814 -1332 838 316 38 38 chr2 208387585 208387664 -42300190 - ERVL LTR ERVL -1514 4250 4172 923 33 0 8 chr2 208387664 208387784 -42300070 + (CTATT)n Simple_repeat Simple_repeat 1 119 0 838 316 38 38 chr2 208387784 208387880 -42299974 - ERVL LTR ERVL -1592 4172 4077 2466 132 6 3 chr2 208387880 208388243 -42299611 - THE1B LTR MaLR 0 364 1 838 316 38 38 chr2 208388243 208388541 -42299313 - ERVL LTR ERVL -1686 4078 3776 879 324 76 29 chr2 208388562 208389046 -42298808 - ERVL LTR ERVL -3076 2688 2182 253 333 58 21 chr2 208389260 208389355 -42298499 - ERVL LTR ERVL -4711 1053 963 1941 169 11 32 chr2 208389355 208389728 -42298126 - MLT1A1 LTR MaLR 0 365 1 253 333 58 21 chr2 208389728 208389821 -42298033 - ERVL LTR ERVL -4801 963 858 310 322 45 40 chr2 208389833 208390010 -42297844 - ERVL LTR ERVL -4818 178 1 985 281 85 40 chr2 208390010 208390479 -42297375 - LTR16C LTR ERVL 0 491 2 22 70 0 0 chr2 208391557 208391600 -42296254 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 208392344 208392367 -42295487 + AT_rich Low_complexity Low_complexity 1 23 0 329 336 28 19 chr2 208392842 208392949 -42294905 - MIR3 SINE MIR -13 195 88 881 271 47 0 chr2 208393545 208393781 -42294073 + L2 LINE L2 2283 2529 -785 2688 268 46 8 chr2 208394290 208395091 -42292763 + L1MEc LINE L1 54 885 -5511 528 203 53 0 chr2 208395163 208395296 -42292558 + L1MEc LINE L1 1014 1153 -5243 3320 173 210 38 chr2 208395335 208396222 -42291632 - MER52C LTR ERV1 0 1278 73 2427 261 61 17 chr2 208396221 208397175 -42290679 + L1MEc LINE L1 1215 2210 -4186 * 464 273 131 49 chr2 208397269 208397658 -42290196 + HERV16 LTR ERVL 3237 3657 -1339 1127 346 31 17 chr2 208397678 208398261 -42289593 + HERV16 LTR ERVL 4057 4647 -1117 455 224 0 0 chr2 208398266 208398373 -42289481 - L1MA10 LINE L1 -3 6331 6225 214 97 32 65 chr2 208398392 208398454 -42289400 + (TAAA)n Simple_repeat Simple_repeat 4 63 0 773 206 40 36 chr2 208398460 208398707 -42289147 - L1ME1 LINE L1 -132 6034 5787 472 142 9 9 chr2 208398690 208398803 -42289051 - L1M4 LINE L1 -3189 2957 2845 * 661 334 48 6 chr2 208398839 208399153 -42288701 - ERVL LTR ERVL -3419 1577 1251 1594 313 54 24 chr2 208399439 208400275 -42287579 - ERVL LTR ERVL -4135 861 1 424 323 36 0 chr2 208400277 208400469 -42287385 - LTR16A LTR ERVL -2 448 250 329 333 33 92 chr2 208400798 208401104 -42286750 - L3 LINE CR1 -1088 489 202 21 0 0 0 chr2 208401782 208401803 -42286051 + AT_rich Low_complexity Low_complexity 1 21 0 2214 128 0 3 chr2 208401811 208402116 -42285738 + AluSx SINE Alu 1 304 -8 312 268 0 49 chr2 208403561 208403643 -42284211 - MER5A DNA MER1_type -108 81 4 * 382 343 98 29 chr2 208403643 208403957 -42283897 + L3b LINE CR1 1105 1440 -143 21 57 0 0 chr2 208404075 208404110 -42283744 + AT_rich Low_complexity Low_complexity 1 35 0 2580 43 10 3 chr2 208404559 208404860 -42282994 + AluY SINE Alu 1 303 -8 246 254 0 30 chr2 208404990 208405057 -42282797 - MIR SINE MIR 0 262 198 280 316 74 0 chr2 208407333 208407428 -42280426 - L2 LINE L2 -24 3289 3188 322 286 0 0 chr2 208407562 208407639 -42280215 + L2 LINE L2 3237 3313 0 251 374 0 0 chr2 208407800 208407883 -42279971 - MIR SINE MIR -127 135 53 846 184 38 32 chr2 208407959 208408144 -42279710 - MER5A DNA MER1_type 0 189 4 242 222 77 103 chr2 208408249 208408366 -42279488 - L3b LINE CR1 -180 1403 1290 472 282 32 43 chr2 208408408 208408596 -42279258 + MER5A DNA MER1_type 4 189 0 188 310 221 9 chr2 208408600 208408713 -42279141 - L3b LINE CR1 -331 1252 1116 386 289 61 0 chr2 208409437 208409551 -42278303 - MIR3 SINE MIR -6 202 82 207 0 0 0 chr2 208409660 208409683 -42278171 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1381 203 50 95 chr2 208409756 208410239 -42277615 - MLT1D LTR MaLR -23 482 22 1061 172 29 0 chr2 208410310 208410484 -42277370 + MER5A DNA MER1_type 7 185 -4 309 320 31 0 chr2 208411664 208411761 -42276093 - L2 LINE L2 -15 3298 3199 195 42 0 0 chr2 208411822 208411846 -42276008 + (T)n Simple_repeat Simple_repeat 1 24 0 262 229 129 0 chr2 208412183 208412253 -42275601 + MIR SINE MIR 110 188 -74 202 300 12 0 chr2 208412253 208412333 -42275521 + (TA)n Simple_repeat Simple_repeat 1 81 0 3911 128 11 3 chr2 208412569 208413204 -42274650 + HSMAR2 DNA Mariner 2 641 -661 28 0 0 0 chr2 208413204 208413232 -42274622 + AT_rich Low_complexity Low_complexity 1 28 0 237 186 0 0 chr2 208413258 208413301 -42274553 - Alu SINE Alu -128 175 133 4189 116 18 21 chr2 208413302 208413983 -42273871 + HSMAR2 DNA Mariner 623 1301 -1 333 0 0 0 chr2 208414640 208414677 -42273177 + (TC)n Simple_repeat Simple_repeat 2 38 0 285 29 0 0 chr2 208414676 208414710 -42273144 + (TG)n Simple_repeat Simple_repeat 1 34 0 * 28 0 0 0 chr2 208416283 208416311 -42271543 + AT_rich Low_complexity Low_complexity 1 28 0 229 288 110 0 chr2 208416528 208416601 -42271253 + MIR SINE MIR 35 115 -147 518 219 228 19 chr2 208416601 208416816 -42271038 + MIR SINE MIR 3 262 0 185 247 39 65 chr2 208416862 208416939 -42270915 + MIR SINE MIR 134 208 -54 404 253 0 0 chr2 208417036 208417119 -42270735 + L2 LINE L2 3225 3307 -6 256 314 86 80 chr2 208417943 208418118 -42269736 - MER5A DNA MER1_type -1 188 13 232 278 153 9 chr2 208418996 208419112 -42268742 + MIR SINE MIR 25 155 -63 227 276 32 70 chr2 208420169 208420325 -42267529 - MLT1J LTR MaLR -94 417 268 2295 95 3 10 chr2 208420357 208420662 -42267192 - AluSq SINE Alu -10 303 1 324 302 27 27 chr2 208420722 208420871 -42266983 - MLT1L LTR MaLR -332 283 135 317 280 80 10 chr2 208420961 208421061 -42266793 + L2 LINE L2 3163 3269 -3 371 312 64 0 chr2 208421139 208421280 -42266574 - MIR SINE MIR -42 220 71 338 346 113 17 chr2 208421732 208422087 -42265767 + L2 LINE L2 2587 2975 -339 1119 121 3 141 chr2 208422287 208422577 -42265277 - L1MB8 LINE L1 0 6178 5929 322 256 34 8 chr2 208422570 208422687 -42265167 - L1MA5 LINE L1 -225 6075 5956 * 920 218 44 19 chr2 208422717 208422923 -42264931 + MIR SINE MIR 20 230 -32 316 298 8 97 chr2 208422947 208423071 -42264783 + L2 LINE L2 3160 3272 0 2564 199 51 21 chr2 208474111 208474988 -42212866 - L1M3 LINE L1 -585 5586 4682 215 159 43 14 chr2 208475237 208475306 -42212548 + (TATAA)n Simple_repeat Simple_repeat 1 71 0 289 193 12 84 chr2 208475360 208475443 -42212411 - MLT1J LTR MaLR -45 466 390 2090 107 0 21 chr2 208476677 208476998 -42210856 - AluSx SINE Alu 0 315 1 1130 217 94 38 chr2 208477164 208477431 -42210423 + AluJo SINE Alu 1 282 -30 2084 147 124 50 chr2 208477451 208477561 -42210293 + MLT2B1 LTR ERVL 1 101 -419 2245 123 0 0 chr2 208477561 208477869 -42209985 + AluSx SINE Alu 1 308 -4 2084 147 124 50 chr2 208477869 208478201 -42209653 + MLT2B1 LTR ERVL 101 476 -44 334 104 0 0 chr2 208478370 208478418 -42209436 + MLT2B1 LTR ERVL 473 520 0 294 358 103 52 chr2 208478421 208479274 -42208580 + L2 LINE L2 2364 3271 -1 295 143 0 0 chr2 208480008 208480050 -42207804 + Tigger5 DNA MER2_type 37 78 -2245 287 189 19 0 chr2 208480053 208480106 -42207748 - Tigger5 DNA MER2_type -6 2317 2264 342 327 78 28 chr2 208480493 208480710 -42207144 + HAL1b LINE L1 457 684 -664 23 0 0 0 chr2 208481381 208481404 -42206450 + AT_rich Low_complexity Low_complexity 1 23 0 24 85 0 0 chr2 208481475 208481534 -42206320 + AT_rich Low_complexity Low_complexity 1 59 0 310 326 11 0 chr2 208481892 208481984 -42205870 + L2 LINE L2 3199 3291 -22 688 263 84 12 chr2 208482241 208482564 -42205290 + L1M4 LINE L1 3592 3937 -2209 241 264 35 0 chr2 208482775 208482862 -42204992 - MLT1L LTR MaLR -2 613 524 1909 153 49 25 chr2 208482877 208483243 -42204611 + THE1C LTR MaLR 1 375 0 366 291 80 33 chr2 208483573 208483724 -42204130 + MIR SINE MIR 23 180 -82 321 187 0 0 chr2 208485738 208485813 -42202041 + (TGGA)n Simple_repeat Simple_repeat 4 78 0 283 246 68 25 chr2 208486937 208487055 -42200799 - L1 LINE L1 -1922 4224 4102 436 248 10 0 chr2 208487064 208487165 -42200689 + MIR SINE MIR 79 180 -82 221 291 0 58 chr2 208487619 208487705 -42200149 - MIR3 SINE MIR -10 198 118 266 179 167 36 chr2 208487795 208487879 -42199975 - L2 LINE L2 0 3313 3219 528 334 129 36 chr2 208488065 208488232 -42199622 + L2 LINE L2 2567 2717 -596 1155 281 44 44 chr2 208488232 208488780 -42199074 - MLT1H LTR MaLR -1 548 1 528 334 129 36 chr2 208488780 208489279 -42198575 + L2 LINE L2 2717 3299 -14 349 319 78 18 chr2 208489288 208489454 -42198400 + MIR3 SINE MIR 10 185 -23 853 267 50 5 chr2 208493889 208494110 -42193744 - MIR SINE MIR -19 243 13 255 31 0 0 chr2 208494426 208494458 -42193396 + (CA)n Simple_repeat Simple_repeat 2 33 0 437 321 50 0 chr2 208494627 208494767 -42193087 + MIR SINE MIR 29 175 -87 1571 147 107 10 chr2 208494780 208495080 -42192774 - Zaphod DNA AcHobo -25 4006 3678 3341 316 35 25 chr2 208495154 208496763 -42191091 + L1PBa LINE L1 3 1627 -5236 1002 154 30 6 chr2 208496740 208496909 -42190945 + L1PB3 LINE L1 1 173 -6031 * 5085 186 76 21 chr2 208496911 208498948 -42188906 + L1PB3 LINE L1 324 2469 -3734 * 9826 179 13 11 chr2 208498936 208501953 -42185901 + L1PB3 LINE L1 3181 6204 -7 1407 260 83 88 chr2 208502031 208503017 -42184837 - Zaphod DNA AcHobo -3041 990 10 281 241 0 120 chr2 208503258 208503366 -42184488 - L2 LINE L2 -2 3270 3176 946 220 19 19 chr2 208503370 208503584 -42184270 + MER20 DNA MER1_type 1 214 -5 307 237 8 102 chr2 208503807 208503925 -42183929 + MLT1D LTR MaLR 1 107 -398 337 239 8 94 chr2 208504326 208504443 -42183411 + MLT1D LTR MaLR 1 107 -398 654 213 65 17 chr2 208504524 208504703 -42183151 + L1PA13 LINE L1 2992 3186 -3017 1820 139 51 51 chr2 208504703 208505078 -42182776 + THE1C LTR MaLR 1 375 0 654 213 65 17 chr2 208505078 208505128 -42182726 + L1PA13 LINE L1 3186 3232 -2971 644 164 8 49 chr2 208505130 208505252 -42182602 + THE1C LTR MaLR 259 375 0 10974 176 21 12 chr2 208505252 208507388 -42180466 + L1PA13 LINE L1 3182 5335 -868 1823 164 131 13 chr2 208507388 208507771 -42180083 - MSTA LTR MaLR 0 428 1 9075 148 14 35 chr2 208507771 208509383 -42178471 - MSTA-int LTR MaLR 0 1580 3 1714 186 129 11 chr2 208509386 208509767 -42178087 - MSTA LTR MaLR 0 428 3 4586 134 49 1 chr2 208509767 208510526 -42177328 + L1PA13 LINE L1 5425 6219 -1 1196 220 97 54 chr2 208510548 208510920 -42176934 + MLT1D LTR MaLR 118 505 0 1810 175 0 7 chr2 208513923 208514220 -42173634 - AluSx SINE Alu -17 295 1 369 0 0 0 chr2 208516184 208516225 -42171629 + (GA)n Simple_repeat Simple_repeat 2 42 0 537 287 168 25 chr2 208517082 208517326 -42170528 - MLT1J2 LTR MaLR -167 279 1 2178 123 0 3 chr2 208517796 208518104 -42169750 - AluSx SINE Alu -5 307 1 4392 113 50 72 chr2 208518450 208519294 -42168560 + LTR12 LTR ERV1 1 825 -1 945 120 0 0 chr2 208519295 208519428 -42168426 + LTR12 LTR ERV1 582 714 0 1988 111 4 4 chr2 208519428 208519708 -42168146 + AluSx SINE Alu 31 310 -2 2251 101 0 3 chr2 208520187 208520485 -42167369 + AluSc SINE Alu 1 297 -12 1233 203 144 48 chr2 208522951 208523151 -42164703 - LTR50 LTR ERVL -6 789 610 3834 180 49 1 chr2 208523151 208523851 -42164003 - MER44D DNA MER2_type 0 605 1 1233 203 144 48 chr2 208523851 208524289 -42163565 - LTR50 LTR ERVL -185 610 3 2053 69 69 0 chr2 208524520 208524844 -42163010 - AluY SINE Alu 0 311 1 432 325 8 0 chr2 208524866 208524986 -42162868 - L2 LINE L2 -9 3304 3184 237 83 0 0 chr2 208525404 208525440 -42162414 + (TA)n Simple_repeat Simple_repeat 2 37 0 753 285 119 32 chr2 208527830 208528234 -42159620 + MLT1J LTR MaLR 3 441 -70 692 284 59 44 chr2 208528242 208528338 -42159516 + L2 LINE L2 2888 2981 -332 2085 142 24 39 chr2 208528338 208528719 -42159135 - THE1C LTR MaLR 0 375 1 692 284 59 44 chr2 208528719 208528943 -42158911 + L2 LINE L2 2981 3213 -100 286 296 81 35 chr2 208529103 208529275 -42158579 - MIR SINE MIR -10 252 73 23 0 0 0 chr2 208529713 208529736 -42158118 + AT_rich Low_complexity Low_complexity 1 23 0 256 352 28 35 chr2 208530060 208530202 -42157652 + MIR SINE MIR 122 262 0 201 325 84 63 chr2 208531114 208531351 -42156503 + L2 LINE L2 1526 1767 -1547 189 0 0 0 chr2 208531522 208531543 -42156311 + (A)n Simple_repeat Simple_repeat 1 21 0 260 326 172 7 chr2 208531545 208531824 -42156030 + L2 LINE L2 1880 2204 -1110 488 316 83 90 chr2 208531856 208532799 -42155055 + L2 LINE L2 2369 3313 0 248 189 158 102 chr2 208533063 208533190 -42154664 + MLT1J LTR MaLR 420 553 -2 690 289 66 41 chr2 208533235 208534119 -42153735 - L1ME LINE L1 -643 5502 4599 1827 309 96 22 chr2 208534159 208534302 -42153552 - L1MEd LINE L1 -1835 4294 4163 2511 109 44 39 chr2 208534302 208534734 -42153120 - MER57B LTR ERV1 0 434 1 1827 309 96 22 chr2 208534734 208536742 -42151112 - L1MEd LINE L1 -1966 4163 2016 401 268 144 23 chr2 208537182 208537614 -42150240 - L1MEd LINE L1 -914 1576 991 291 249 113 92 chr2 208537632 208537817 -42150037 - L1ME3A LINE L1 -15 6155 5967 546 258 7 0 chr2 208537859 208538010 -42149844 - L1ME3A LINE L1 -208 5962 5811 1373 208 48 10 chr2 208538140 208538433 -42149421 - AluJo SINE Alu -8 304 1 644 296 117 44 chr2 208538554 208539101 -42148753 - L1MEd LINE L1 -5155 964 378 386 239 209 51 chr2 208540538 208540772 -42147082 - L1ME4a LINE L1 -8 6113 5843 26 64 0 0 chr2 208540793 208540840 -42147014 + AT_rich Low_complexity Low_complexity 1 47 0 24 32 0 0 chr2 208540943 208540974 -42146880 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 208540988 208541009 -42146845 + AT_rich Low_complexity Low_complexity 1 21 0 2495 69 3 0 chr2 208542053 208542358 -42145496 + AluY SINE Alu 1 306 -5 1206 219 10 21 chr2 208542907 208543195 -42144659 + AluSg SINE Alu 3 287 -23 1928 146 3 3 chr2 208543726 208544027 -42143827 + AluSx SINE Alu 1 301 -11 344 270 99 9 chr2 208545539 208545650 -42142204 - MER103 DNA DNA -45 121 1 2259 231 71 46 chr2 208545707 208546399 -42141455 + HsTC2c DNA Tc2 21 729 0 2112 114 3 3 chr2 208546892 208547189 -42140665 - AluY SINE Alu -14 297 1 238 281 37 61 chr2 208547618 208547700 -42140154 - L3 LINE CR1 -105 1472 1393 247 342 0 0 chr2 208548416 208548492 -42139362 + L2 LINE L2 3227 3302 -11 318 233 93 0 chr2 208548550 208548636 -42139218 + L1ME3A LINE L1 5793 5886 -284 1001 174 36 10 chr2 208548638 208548834 -42139020 + L1MB3 LINE L1 13 213 -7352 1215 108 133 0 chr2 208548848 208549043 -42138811 - MSTA LTR MaLR -207 221 1 8877 185 16 64 chr2 208549043 208551966 -42135888 + L1MB3 LINE L1 2178 4942 -2623 2420 194 56 8 chr2 208552066 208552587 -42135267 + L1MB3 LINE L1 7049 7594 -8 624 296 133 0 chr2 208552622 208552818 -42135036 + MIR SINE MIR 4 225 -37 307 285 8 57 chr2 208553257 208553380 -42134474 - LTR16C LTR ERVL -4 487 371 587 300 80 57 chr2 208553945 208554380 -42133474 - ERVL LTR ERVL -432 5332 4839 1709 157 73 20 chr2 208554380 208554736 -42133118 - THE1C LTR MaLR 0 375 1 587 300 80 57 chr2 208554736 208554869 -42132985 - ERVL LTR ERVL -925 4839 4711 2454 95 11 0 chr2 208554869 208555218 -42132636 + L1PA13 LINE L1 5807 6159 -4 943 327 58 26 chr2 208555751 208556286 -42131568 - ERVL LTR ERVL -1312 4452 3901 1449 359 60 17 chr2 208556406 208557876 -42129978 - ERVL LTR ERVL -1976 3678 2085 272 338 71 32 chr2 208558253 208558407 -42129447 - ERVL LTR ERVL -5043 721 562 292 282 26 0 chr2 208560854 208560932 -42126922 + MIR3 SINE MIR 122 201 -7 273 284 30 0 chr2 208561059 208561126 -42126728 + L2 LINE L2 3244 3312 -1 21 100 0 0 chr2 208561773 208561843 -42126011 + AT_rich Low_complexity Low_complexity 1 70 0 638 254 12 0 chr2 208562756 208562921 -42124933 - L1ME1 LINE L1 -195 6365 6199 896 225 66 113 chr2 208562930 208563432 -42124422 + MER34B LTR ERV1 5 467 -98 1581 180 3 24 chr2 208563432 208563721 -42124133 + AluJb SINE Alu 6 288 -24 896 225 66 113 chr2 208563721 208563809 -42124045 + MER34B LTR ERV1 467 558 -7 2423 210 33 129 chr2 208563809 208564389 -42123465 - L1ME1 LINE L1 -380 6180 5748 1485 124 27 4 chr2 208564389 208564647 -42123207 + L1MA5 LINE L1 6035 6298 -2 2423 210 33 129 chr2 208564647 208565337 -42122517 - L1ME1 LINE L1 -812 5748 4994 3309 257 54 34 chr2 208565346 208566602 -42121252 - L1MC4a LINE L1 -1 7807 6585 3070 195 13 7 chr2 208566770 208567278 -42120576 + MLT2B3 LTR ERVL 3 516 -38 198 71 0 0 chr2 208567278 208567306 -42120548 + (TA)n Simple_repeat Simple_repeat 2 29 0 3070 195 13 7 chr2 208567306 208567346 -42120508 + MLT2B3 LTR ERVL 516 554 0 934 255 30 104 chr2 208567346 208568070 -42119784 - L1ME1 LINE L1 -3422 3118 2460 1780 84 8 4 chr2 208568083 208568321 -42119533 + AluSp SINE Alu 1 239 -74 27 35 0 0 chr2 208568467 208568496 -42119358 + AT_rich Low_complexity Low_complexity 1 29 0 2015 19 19 12 chr2 208568499 208568757 -42119097 - L1PA2 LINE L1 -10 6145 5886 4293 8 0 0 chr2 208568758 208569241 -42118613 + L1PA2 LINE L1 5413 5895 -260 432 203 11 3 chr2 208569253 208569359 -42118495 - L1MA8 LINE L1 -8 6283 6179 1033 234 57 74 chr2 208569365 208569952 -42117902 - L1ME1 LINE L1 -4364 2357 1585 32 26 0 0 chr2 208570018 208570057 -42117797 + AT_rich Low_complexity Low_complexity 1 39 0 418 227 53 27 chr2 208570166 208570316 -42117538 - L1ME1 LINE L1 -4858 1682 1529 868 291 103 26 chr2 208570351 208570972 -42116882 - L1ME1 LINE L1 -5142 1579 911 212 149 21 0 chr2 208571552 208571599 -42116255 + (TA)n Simple_repeat Simple_repeat 2 49 0 405 311 160 9 chr2 208571847 208572059 -42115795 + MLT1J1 LTR MaLR 67 310 -136 576 335 69 55 chr2 208572380 208573240 -42114614 - L2 LINE L2 -9 3263 2100 383 348 91 5 chr2 208573876 208574063 -42113791 + MIR SINE MIR 32 234 -28 246 232 146 24 chr2 208574064 208574146 -42113708 + L2 LINE L2 3222 3313 0 216 0 0 0 chr2 208575990 208576014 -42111840 + (TG)n Simple_repeat Simple_repeat 2 25 0 10054 226 70 13 chr2 208576107 208576882 -42110972 - L1MB8 LINE L1 0 6989 6260 186 43 0 0 chr2 208576882 208576905 -42110949 + (TG)n Simple_repeat Simple_repeat 2 24 0 10054 226 70 13 chr2 208576905 208579959 -42107895 - L1MB8 LINE L1 -729 6260 2956 36 23 0 0 chr2 208579983 208580026 -42107828 + AT_rich Low_complexity Low_complexity 1 43 0 318 297 18 77 chr2 208580051 208580077 -42107777 - L1M4b LINE L1 -4321 2817 2791 2719 198 54 57 chr2 208580077 208580404 -42107450 + MER72 LTR ERV1 1 327 -395 2451 62 0 0 chr2 208580404 208580709 -42107145 + AluY SINE Alu 1 305 -6 2719 198 54 57 chr2 208580709 208581105 -42106749 + MER72 LTR ERV1 327 722 0 318 297 18 77 chr2 208581105 208581405 -42106449 - L1M4b LINE L1 -4347 2791 2510 198 0 0 0 chr2 208581647 208581669 -42106185 + (TG)n Simple_repeat Simple_repeat 2 23 0 2639 248 85 23 chr2 208581688 208582573 -42105281 - L1M4b LINE L1 -4633 2326 1497 198 0 0 0 chr2 208582573 208582595 -42105259 + (TA)n Simple_repeat Simple_repeat 2 23 0 2639 248 85 23 chr2 208582595 208583517 -42104337 - L1M4b LINE L1 -5462 1497 237 903 326 3 20 chr2 208583513 208583807 -42104047 - L1MB8 LINE L1 -6045 814 526 * 1089 270 70 0 chr2 208583844 208584144 -42103710 - L1MB8 LINE L1 -6535 324 4 2045 202 49 29 chr2 208584264 208584750 -42103104 + MLT1D LTR MaLR 1 496 -9 1058 172 28 0 chr2 208585105 208585285 -42102569 + MER5A DNA MER1_type 2 186 -3 303 375 58 0 chr2 208585942 208586046 -42101808 - MIR SINE MIR -133 129 20 321 164 0 136 chr2 208586093 208586203 -42101651 - L1MD3 LINE L1 -10 7985 7891 46 54 0 0 chr2 208586206 208586280 -42101574 + AT_rich Low_complexity Low_complexity 1 74 0 289 273 0 39 chr2 208587383 208587460 -42100394 + MIR SINE MIR 78 151 -111 215 69 86 17 chr2 208587482 208587540 -42100314 + (TATAA)n Simple_repeat Simple_repeat 3 64 0 929 273 77 80 chr2 208587894 208588491 -42099363 - MLT1G1 LTR MaLR 0 595 1 1780 171 72 7 chr2 208588605 208589008 -42098846 - Charlie1 DNA MER1_type -1 2760 2332 1358 172 118 25 chr2 208589024 208589045 -42098809 + MLT1A1 LTR MaLR 19 37 -328 1289 185 4 4 chr2 208589045 208589277 -42098577 - MER46A DNA MER2_type 0 236 5 1358 172 118 25 chr2 208589277 208589569 -42098285 + MLT1A1 LTR MaLR 37 361 -4 589 114 86 0 chr2 208589585 208589690 -42098164 - Charlie1 DNA MER1_type -436 2325 2212 * 614 231 7 61 chr2 208589682 208589829 -42098025 - Charlie1 DNA MER1_type -2620 141 3 448 287 42 28 chr2 208590357 208590500 -42097354 + L2 LINE L2 3163 3307 -6 434 233 88 109 chr2 208590639 208590709 -42097145 + MIR SINE MIR 1 71 -191 1778 173 17 0 chr2 208590709 208591004 -42096850 + AluJo SINE Alu 1 300 -12 434 233 88 109 chr2 208591004 208591126 -42096728 + MIR SINE MIR 71 189 -73 490 308 93 6 chr2 208591548 208591720 -42096134 - MIR SINE MIR -66 196 10 903 136 17 227 chr2 208592819 208593172 -42094682 + L1MA7 LINE L1 5988 6266 -25 394 262 56 24 chr2 208593448 208593574 -42094280 + L2 LINE L2 3184 3313 0 28 48 0 0 chr2 208594226 208594268 -42093586 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr2 208595466 208595494 -42092360 + AT_rich Low_complexity Low_complexity 1 28 0 244 348 82 65 chr2 208595577 208595660 -42092194 + L2 LINE L2 2812 2892 -380 945 244 0 10 chr2 208595660 208595869 -42091985 + MER3 DNA MER1_type 1 207 -2 244 348 82 65 chr2 208595869 208596078 -42091776 + L2 LINE L2 2892 3109 -163 269 265 15 0 chr2 208596197 208596265 -42091589 - MIR SINE MIR -106 156 88 266 260 104 0 chr2 208596351 208596428 -42091426 + L2 LINE L2 3188 3272 0 558 342 11 5 chr2 208596692 208596879 -42090975 + MIR3 SINE MIR 17 204 -4 24 32 0 0 chr2 208596998 208597029 -42090825 + AT_rich Low_complexity Low_complexity 1 31 0 747 50 10 0 chr2 208597156 208597255 -42090599 + AluS SINE Alu 3 102 -211 689 241 84 41 chr2 208597261 208597477 -42090377 - MLT1G1 LTR MaLR -179 416 146 241 237 0 17 chr2 208599085 208599144 -42088710 + L2 LINE L2 3256 3313 0 323 341 94 12 chr2 208600847 208601017 -42086837 + MIR SINE MIR 20 203 -59 233 349 12 0 chr2 208601037 208601120 -42086734 - MIR SINE MIR -110 152 69 1356 274 105 17 chr2 208601301 208601768 -42086086 - MLT1J LTR MaLR -2 509 2 28 99 0 0 chr2 208601964 208602055 -42085799 + AT_rich Low_complexity Low_complexity 1 91 0 252 287 9 9 chr2 208602292 208602400 -42085454 + CT-rich Low_complexity Low_complexity 1 108 0 1028 238 56 68 chr2 208602999 208603671 -42084183 - LTR41 LTR ERVL -6 767 15 240 326 127 23 chr2 208603832 208604053 -42083801 + L1MC4 LINE L1 6760 7003 -1039 2271 63 17 10 chr2 208604835 208605137 -42082717 - AluY SINE Alu -7 304 1 1114 106 0 11 chr2 208605288 208605467 -42082387 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 207 161 0 0 chr2 208605467 208605498 -42082356 + polypyrimidine Low_complexity Low_complexity 2 32 0 5549 103 39 4 chr2 208605498 208606323 -42081531 - L1PA11 LINE L1 0 6174 5321 1169 64 0 0 chr2 208606324 208606465 -42081389 - AluY SINE Alu -10 301 161 12754 185 15 37 chr2 208606465 208609702 -42078152 - L1PA12 LINE L1 -817 6767 3460 2114 125 0 35 chr2 208609702 208610014 -42077840 - AluSx SINE Alu -6 306 6 12754 185 15 37 chr2 208610014 208611443 -42076411 - L1PA12 LINE L1 -4124 3460 1609 180 0 0 0 chr2 208611443 208611463 -42076391 + (TTG)n Simple_repeat Simple_repeat 2 21 0 12754 185 15 37 chr2 208611463 208611856 -42075998 - L1PA12 LINE L1 -5975 1609 1209 1892 156 16 22 chr2 208613256 208613570 -42074284 + AluJo SINE Alu 1 312 0 319 250 12 0 chr2 208613671 208613751 -42074103 + HAL1 LINE L1 1522 1602 -905 287 263 76 8 chr2 208613809 208613927 -42073927 - MLT1L LTR MaLR -118 497 372 234 268 0 0 chr2 208613983 208614039 -42073815 + (TG)n Simple_repeat Simple_repeat 2 57 0 262 309 124 65 chr2 208614056 208614273 -42073581 - MLT1L LTR MaLR -348 267 38 306 0 0 0 chr2 208614572 208614606 -42073248 + (CA)n Simple_repeat Simple_repeat 1 34 0 23 0 0 0 chr2 208614662 208614685 -42073169 + AT_rich Low_complexity Low_complexity 1 23 0 205 188 0 0 chr2 208615030 208615062 -42072792 - MIR SINE MIR -22 240 209 402 246 103 63 chr2 208615079 208615603 -42072251 + L1M4 LINE L1 2723 3267 -2879 425 319 150 36 chr2 208615668 208616142 -42071712 + L1M4 LINE L1 3396 3923 -2223 240 35 0 0 chr2 208617010 208617039 -42070815 + (TG)n Simple_repeat Simple_repeat 2 30 0 303 304 95 7 chr2 208617804 208617952 -42069902 - L1ME4a LINE L1 -1 6120 5960 365 322 8 0 chr2 208618071 208618189 -42069665 + L2 LINE L2 3195 3313 0 26 30 0 0 chr2 208618383 208618416 -42069438 + AT_rich Low_complexity Low_complexity 1 33 0 207 151 38 0 chr2 208619682 208619735 -42068119 + (TA)n Simple_repeat Simple_repeat 1 55 0 660 182 28 28 chr2 208620631 208620774 -42067080 - MLT1E LTR MaLR 0 593 451 608 242 56 48 chr2 208620779 208621010 -42066844 - MLT1E LTR MaLR -346 247 15 354 339 123 0 chr2 208621480 208621675 -42066179 - MIR SINE MIR -23 239 21 311 313 75 0 chr2 208621753 208621887 -42065967 - MIR SINE MIR -3 259 116 233 222 0 0 chr2 208621902 208621947 -42065907 + (TATATG)n Simple_repeat Simple_repeat 6 50 0 233 176 0 0 chr2 208621947 208621998 -42065856 - L1MC4 LINE L1 -1339 6703 6653 192 317 57 89 chr2 208624539 208624662 -42063192 - L2 LINE L2 -271 3001 2883 224 274 0 0 chr2 208625418 208625469 -42062385 + CT-rich Low_complexity Low_complexity 2 52 0 6943 99 6 10 chr2 208625659 208626691 -42061163 - L1MA2 LINE L1 0 6304 5277 266 312 0 71 chr2 208627691 208627832 -42060022 - MIR SINE MIR -60 202 72 2648 7 3 3 chr2 208627950 208628243 -42059611 - AluYa5 SINE Alu -18 293 1 8818 118 9 2 chr2 208628599 208629876 -42057978 + HSMAR1 DNA Mariner 2 1287 0 851 292 58 35 chr2 208629894 208630288 -42057566 + MLT1L LTR MaLR 205 607 -8 301 227 0 31 chr2 208632985 208633082 -42054772 + (CGGG)n Simple_repeat Simple_repeat 3 96 0 423 83 0 0 chr2 208633172 208633232 -42054622 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 263 378 9 9 chr2 208633321 208633432 -42054422 + LTR67 LTR ERVL 101 211 -346 248 246 0 0 chr2 208634622 208634687 -42053167 + (TA)n Simple_repeat Simple_repeat 2 66 0 415 350 34 31 chr2 208635073 208635364 -42052490 + ERVL LTR ERVL 1507 1798 -3966 1960 327 92 41 chr2 208635374 208636689 -42051165 + ERVL LTR ERVL 1904 3321 -2443 907 251 47 9 chr2 208636689 208636904 -42050950 + MER58A DNA MER1_type 1 223 -1 1960 327 92 41 chr2 208636904 208637238 -42050616 + ERVL LTR ERVL 3321 3637 -2127 606 317 88 30 chr2 208637505 208637833 -42050021 + ERVL LTR ERVL 3935 4281 -1483 1932 130 0 11 chr2 208638617 208638902 -42048952 + AluSx SINE Alu 3 284 -28 396 0 0 0 chr2 208638915 208638959 -42048895 + (GAA)n Simple_repeat Simple_repeat 2 45 0 1982 139 3 60 chr2 208638984 208639351 -42048503 - MER7A DNA MER2_type -1 345 2 1303 280 42 45 chr2 208639688 208640370 -42047484 + L1ME LINE L1 4515 5197 -949 2091 155 0 0 chr2 208640370 208640680 -42047174 + AluSx SINE Alu 1 310 -2 1303 280 42 45 chr2 208640680 208640718 -42047136 + L1ME LINE L1 5197 5234 -912 1957 200 121 11 chr2 208640718 208641173 -42046681 - MLT1D LTR MaLR 0 505 1 1303 280 42 45 chr2 208641173 208641232 -42046622 + L1ME LINE L1 5234 5293 -853 393 102 0 0 chr2 208641302 208641361 -42046493 + (CA)n Simple_repeat Simple_repeat 2 60 0 642 312 10 0 chr2 208641733 208641932 -42045922 - MIR SINE MIR -45 217 17 383 291 86 82 chr2 208642169 208642574 -42045280 + L1ME LINE L1 5300 5706 -415 1846 108 86 4 chr2 208643026 208643304 -42044550 + AluSg SINE Alu 1 301 -9 7839 154 40 18 chr2 208643318 208645746 -42042108 - L1MA8 LINE L1 -17 6274 3785 1950 141 0 3 chr2 208645746 208646067 -42041787 - AluSg SINE Alu 0 320 1 9830 83 7 1 chr2 208646081 208648183 -42039671 - L1PA7 LINE L1 -6 6148 4028 3725 191 25 4 chr2 208648208 208649013 -42038841 - L1 LINE L1 -2078 5028 4207 * 7628 223 63 40 chr2 208648992 208650997 -42036857 - L1 LINE L1 -4978 2052 1 385 244 171 16 chr2 208652499 208652622 -42035232 + MIR SINE MIR 89 230 -32 337 310 117 29 chr2 208652869 208653108 -42034746 - MLT1K LTR MaLR -306 282 23 21 36 0 0 chr2 208653278 208653306 -42034548 + AT_rich Low_complexity Low_complexity 1 28 0 572 242 174 0 chr2 208655093 208655271 -42032583 + MIR SINE MIR 44 252 -10 266 209 25 0 chr2 208655400 208655496 -42032358 + L1MC4 LINE L1 6588 6646 -1139 264 244 49 0 chr2 208655472 208655554 -42032300 - L1MC4 LINE L1 -1343 6699 6614 * 316 322 0 0 chr2 208655558 208655648 -42032206 + L1MC4 LINE L1 6614 6703 -1339 * 321 232 98 0 chr2 208655584 208655666 -42032188 - L1MC4 LINE L1 -1339 6703 6614 227 156 0 0 chr2 208655682 208655727 -42032127 - LTR66 LTR ERVL -171 439 395 1033 308 161 20 chr2 208655780 208656629 -42031225 - L2 LINE L2 0 3313 2339 21 36 0 0 chr2 208658999 208659027 -42028827 + AT_rich Low_complexity Low_complexity 1 28 0 446 305 153 5 chr2 208659206 208659409 -42028445 + MIR SINE MIR 18 250 -12 303 28 0 0 chr2 208659570 208659606 -42028248 + (TG)n Simple_repeat Simple_repeat 1 36 0 1973 204 65 56 chr2 208660888 208661492 -42026362 + L1ME2 LINE L1 5546 6154 -10 234 62 0 0 chr2 208662384 208662416 -42025438 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 201 283 50 0 chr2 208662417 208662477 -42025377 - MIR SINE MIR -4 258 196 * 323 288 63 34 chr2 208662462 208662667 -42025187 - L2 LINE L2 -108 3205 2995 275 177 16 0 chr2 208662833 208662895 -42024959 + CT-rich Low_complexity Low_complexity 3 65 0 1966 199 13 10 chr2 208664176 208664573 -42023281 + L1PB4 LINE L1 5747 6144 -12 24 0 0 0 chr2 208665042 208665066 -42022788 + AT_rich Low_complexity Low_complexity 1 24 0 6145 33 1 0 chr2 208665272 208666313 -42021541 - L1PA3 LINE L1 -479 5676 4635 4072 37 0 0 chr2 208666313 208666800 -42021054 + L1PA3 LINE L1 5665 6152 -3 36901 90 15 10 chr2 208666825 208672477 -42015377 + L1P2 LINE L1 6 5681 -473 225 0 0 0 chr2 208672586 208672611 -42015243 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 228 67 0 0 chr2 208673319 208673349 -42014505 + (A)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr2 208673668 208673690 -42014164 + AT_rich Low_complexity Low_complexity 1 22 0 1021 286 49 40 chr2 208674106 208674700 -42013154 + L1MC4a LINE L1 5297 5895 -1913 309 93 74 0 chr2 208674700 208674754 -42013100 + L1MA9 LINE L1 6217 6274 -38 495 99 0 0 chr2 208674791 208674862 -42012992 + MSTA LTR MaLR 1 71 -357 6723 153 25 21 chr2 208674962 208676205 -42011649 - L1 LINE L1 -1129 5017 3770 2224 188 60 13 chr2 208676740 208677289 -42010565 - Charlie1a DNA MER1_type -5 1450 876 3472 144 26 3 chr2 208677359 208677934 -42009920 - L1PA16 LINE L1 -9 6157 5570 1675 81 17 0 chr2 208677934 208678185 -42009669 - L1PA8 LINE L1 0 6172 5925 3117 161 33 4 chr2 208678185 208679010 -42008844 - L1PA16 LINE L1 -594 5572 4727 856 194 0 7 chr2 208679016 208679171 -42008683 - MLT1A1 LTR MaLR -211 154 1 5450 114 66 9 chr2 208679660 208681129 -42006725 - L1PA13 LINE L1 0 6163 4623 2874 206 79 67 chr2 208681130 208682001 -42005853 - Charlie1a DNA MER1_type -573 882 1 393 329 7 22 chr2 208682178 208682315 -42005539 - MIR SINE MIR -121 141 7 242 260 0 0 chr2 208683610 208683660 -42004194 + (CCA)n Simple_repeat Simple_repeat 3 52 0 185 336 48 10 chr2 208683714 208683818 -42004036 - MIR SINE MIR -88 174 67 2210 148 3 11 chr2 208683883 208684256 -42003598 - L1PB1 LINE L1 0 6151 5782 372 179 66 3 chr2 208684265 208684573 -42003281 + (TA)n Simple_repeat Simple_repeat 1 327 0 353 186 62 3 chr2 208684636 208684949 -42002905 + (TA)n Simple_repeat Simple_repeat 1 331 0 235 146 31 31 chr2 208684980 208685110 -42002744 + (TA)n Simple_repeat Simple_repeat 2 131 0 479 39 110 13 chr2 208685176 208685331 -42002523 + (TA)n Simple_repeat Simple_repeat 1 170 0 3825 126 15 1 chr2 208685349 208686248 -42001606 - L1PB1 LINE L1 -371 5780 4873 313 405 19 34 chr2 208686255 208686460 -42001394 + L2 LINE L2 3010 3211 -61 337 224 126 70 chr2 208687154 208687297 -42000557 + MER112 DNA MER1_type 80 230 -30 204 40 0 0 chr2 208687329 208687354 -42000500 + (CA)n Simple_repeat Simple_repeat 2 26 0 207 190 52 0 chr2 208688152 208688210 -41999644 + T-rich Low_complexity Low_complexity 5 65 0 292 304 70 44 chr2 208688442 208688600 -41999254 + MER5B DNA MER1_type 17 178 0 1001 336 147 19 chr2 208689047 208690014 -41997840 - L2 LINE L2 -534 2780 1690 243 276 79 0 chr2 208690335 208690411 -41997443 + HsTC2 DNA Tc2 1 82 -1816 481 368 46 0 chr2 208690661 208690987 -41996867 + HsTC2 DNA Tc2 523 863 -1035 2116 110 21 0 chr2 208691295 208691586 -41996268 + AluSx SINE Alu 1 297 -15 236 200 17 0 chr2 208692216 208692276 -41995578 + (TA)n Simple_repeat Simple_repeat 1 61 0 518 29 15 0 chr2 208694494 208694562 -41993292 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 197 307 193 0 chr2 208696241 208696329 -41991525 - MIR SINE MIR -86 122 18 2896 206 20 74 chr2 208696789 208698036 -41989818 - L1MB3 LINE L1 -2 6295 5117 3502 253 89 44 chr2 208698734 208700504 -41987350 - L1ME2 LINE L1 -174 5990 4086 1730 172 0 10 chr2 208700504 208700794 -41987060 - AluJo SINE Alu -15 297 11 3502 253 89 44 chr2 208700794 208701554 -41986300 - L1ME2 LINE L1 -2078 4086 3362 294 29 0 0 chr2 208702171 208702206 -41985648 + (TG)n Simple_repeat Simple_repeat 2 36 0 310 327 31 43 chr2 208702222 208702384 -41985470 + MLT1J2 LTR MaLR 1 161 -286 242 355 157 25 chr2 208702797 208703281 -41984573 - L2 LINE L2 -903 2411 1864 239 351 64 0 chr2 208703452 208703546 -41984308 - L2 LINE L2 -24 3289 3190 295 53 0 0 chr2 208703574 208703612 -41984242 + tRNA-Gly-GGA tRNA tRNA 1 38 -37 262 46 21 35 chr2 208703815 208703870 -41983984 - L1PA10 LINE L1 -4 6170 6119 2666 147 2 2 chr2 208703970 208704413 -41983441 - L1P LINE L1 -1234 4912 4470 273 75 0 0 chr2 208704573 208704613 -41983241 + (A)n Simple_repeat Simple_repeat 1 40 0 29 28 0 0 chr2 208704923 208704959 -41982895 + AT_rich Low_complexity Low_complexity 1 36 0 198 0 0 0 chr2 208706970 208706992 -41980862 + (TA)n Simple_repeat Simple_repeat 2 23 0 189 313 72 35 chr2 208707676 208707848 -41980006 - MIR SINE MIR 0 262 81 195 204 0 0 chr2 208708008 208708057 -41979797 + (TATG)n Simple_repeat Simple_repeat 3 51 0 22 0 0 0 chr2 208708754 208708776 -41979078 + AT_rich Low_complexity Low_complexity 1 22 0 312 362 89 28 chr2 208708909 208709191 -41978663 + L2 LINE L2 2600 2898 -416 4940 84 141 3 chr2 208709246 208709972 -41977882 + LTR12 LTR ERV1 1 826 0 1158 243 70 17 chr2 208710056 208710357 -41977497 - MER58B DNA MER1_type -24 317 1 262 288 112 0 chr2 208710358 208710483 -41977371 + L1MC4a LINE L1 5784 5922 -1886 2480 78 0 0 chr2 208710775 208711083 -41976771 - AluY SINE Alu -3 308 1 1905 241 98 16 chr2 208711424 208712006 -41975848 + HAL1 LINE L1 1434 2063 -444 517 281 88 35 chr2 208712006 208712177 -41975677 - MER63A DNA MER1_type -30 180 1 475 234 53 64 chr2 208712205 208712376 -41975478 + HAL1 LINE L1 2144 2312 -195 522 222 99 81 chr2 208712455 208712676 -41975178 - MLT1L LTR MaLR -337 278 54 22 70 0 0 chr2 208712965 208713008 -41974846 + AT_rich Low_complexity Low_complexity 1 43 0 675 222 13 78 chr2 208713459 208713689 -41974165 - HAL1 LINE L1 -197 2310 2096 204 235 272 12 chr2 208714591 208714672 -41973182 + MIR SINE MIR 161 262 0 23 0 0 0 chr2 208714738 208714761 -41973093 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr2 208715645 208715681 -41972173 + AT_rich Low_complexity Low_complexity 1 36 0 246 294 49 10 chr2 208716300 208716402 -41971452 + Charlie7 DNA MER1_type 2 107 -2505 267 149 21 0 chr2 208717381 208717428 -41970426 + L2 LINE L2 3266 3313 0 21 0 0 0 chr2 208718266 208718287 -41969567 + AT_rich Low_complexity Low_complexity 1 21 0 237 65 0 0 chr2 208718453 208718484 -41969370 + (TTA)n Simple_repeat Simple_repeat 2 32 0 22 56 0 0 chr2 208719083 208719119 -41968735 + AT_rich Low_complexity Low_complexity 1 36 0 33 25 0 0 chr2 208719484 208719524 -41968330 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr2 208719780 208719811 -41968043 + AT_rich Low_complexity Low_complexity 1 31 0 567 306 71 5 chr2 208720298 208720494 -41967360 - MIR SINE MIR -3 259 51 2001 141 20 0 chr2 208720564 208720870 -41966984 + AluJb SINE Alu 1 312 0 206 292 69 42 chr2 208720871 208720943 -41966911 - MIR3 SINE MIR -45 163 90 426 329 17 29 chr2 208721061 208721268 -41966586 + MIR SINE MIR 20 222 -40 24 0 0 0 chr2 208722308 208722332 -41965522 + AT_rich Low_complexity Low_complexity 1 24 0 247 231 154 70 chr2 208723779 208723922 -41963932 - L2 LINE L2 0 3313 3159 469 326 0 7 chr2 208723928 208724072 -41963782 + HsTC2 DNA Tc2 6 148 -1750 540 224 70 26 chr2 208724074 208724230 -41963624 + HsTC2 DNA Tc2 1274 1436 -462 237 65 0 0 chr2 208725288 208725319 -41962535 + (CA)n Simple_repeat Simple_repeat 2 32 0 402 318 71 8 chr2 208725786 208725912 -41961942 + MIR SINE MIR 20 153 -109 255 270 144 9 chr2 208727131 208727242 -41960612 + L2 LINE L2 3188 3313 0 31 26 0 0 chr2 208727614 208727652 -41960202 + AT_rich Low_complexity Low_complexity 1 38 0 1310 169 58 23 chr2 208727794 208728055 -41959799 + AluJb SINE Alu 35 304 -8 256 377 0 0 chr2 208728255 208728377 -41959477 + L1ME4a LINE L1 5682 5803 -2005 287 293 41 8 chr2 208728500 208728623 -41959231 + MIR SINE MIR 126 252 -10 298 242 142 8 chr2 208728784 208728904 -41958950 + L1ME4a LINE L1 5984 6119 -2 220 265 0 0 chr2 208728953 208729002 -41958852 + L2 LINE L2 3265 3313 0 413 101 68 20 chr2 208729706 208729854 -41958000 + (TATAA)n Simple_repeat Simple_repeat 5 159 0 50 42 0 0 chr2 208729854 208729925 -41957929 + AT_rich Low_complexity Low_complexity 1 71 0 1062 164 55 14 chr2 208729925 208730145 -41957709 + L1MB4 LINE L1 5952 6180 0 33 25 0 0 chr2 208730171 208730211 -41957643 + AT_rich Low_complexity Low_complexity 1 40 0 263 224 0 0 chr2 208730227 208730294 -41957560 - L1MA10 LINE L1 -11 6323 6257 2274 178 23 17 chr2 208730384 208730867 -41956987 - L1MB8 LINE L1 -10 6168 5683 1688 81 142 4 chr2 208730868 208731128 -41956726 - AluY SINE Alu -5 296 1 1015 265 51 40 chr2 208731206 208731557 -41956297 - LTR55 LTR ERV -121 427 73 1801 217 18 5 chr2 208731562 208731963 -41955891 - L1MB8 LINE L1 -499 5675 5270 408 174 0 35 chr2 208731963 208732049 -41955805 - AluS SINE Alu 0 302 220 1274 96 0 16 chr2 208732055 208732242 -41955612 - L1PA7 LINE L1 -3 6151 5968 1085 152 10 10 chr2 208732244 208732448 -41955406 - L1MB4 LINE L1 -859 5287 5084 3744 199 39 20 chr2 208732456 208733309 -41954545 + L1MB4 LINE L1 5312 6180 0 3145 238 59 36 chr2 208733307 208734328 -41953526 - L1MB8 LINE L1 -1053 5093 4050 * 5847 71 13 8 chr2 208734382 208735157 -41952697 - L1PA10 LINE L1 0 6168 5390 777 186 32 113 chr2 208735144 208735392 -41952462 - L1MB8 LINE L1 -2206 3940 3713 * 313 287 172 25 chr2 208735421 208735578 -41952276 - L1M4 LINE L1 -2255 3891 3712 1582 131 0 4 chr2 208735584 208735851 -41952003 + L1MA2 LINE L1 6039 6304 0 22 0 0 0 chr2 208735915 208735937 -41951917 + AT_rich Low_complexity Low_complexity 1 22 0 35 92 0 0 chr2 208735986 208736084 -41951770 + AT_rich Low_complexity Low_complexity 1 98 0 27 73 0 0 chr2 208736124 208736179 -41951675 + AT_rich Low_complexity Low_complexity 1 55 0 2019 162 15 0 chr2 208737044 208737384 -41950470 - MER7A DNA MER2_type -3 343 1 27 0 0 0 chr2 208737870 208737897 -41949957 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr2 208738135 208738158 -41949696 + AT_rich Low_complexity Low_complexity 1 23 0 337 330 111 18 chr2 208738311 208738814 -41949040 - HAL1 LINE L1 -849 1658 1109 249 83 0 0 chr2 208739689 208739725 -41948129 + (CA)n Simple_repeat Simple_repeat 2 37 0 2278 169 36 11 chr2 208739851 208740301 -41947553 - L1MC1 LINE L1 -6 6327 5867 677 286 129 20 chr2 208740564 208740920 -41946934 - MLT1I LTR MaLR -9 400 6 184 219 14 14 chr2 208741207 208741280 -41946574 + (TA)n Simple_repeat Simple_repeat 2 74 0 451 296 101 43 chr2 208741882 208742271 -41945583 + MLT1J2 LTR MaLR 1 409 0 294 261 62 0 chr2 208743169 208743234 -41944620 - MER91A DNA MER1_type -1 195 127 243 261 0 0 chr2 208743260 208743306 -41944548 - MER91A DNA MER1_type -148 48 3 393 200 25 0 chr2 208743570 208743650 -41944204 - MLT1K LTR MaLR -2 586 505 1060 213 9 28 chr2 208743665 208743876 -41943978 - MER20 DNA MER1_type -10 209 3 392 318 66 33 chr2 208744706 208744948 -41942906 - MLT1J LTR MaLR -22 489 240 271 257 53 26 chr2 208745196 208745309 -41942545 - MLT2E LTR ERVL -7 621 506 331 284 11 23 chr2 208745529 208745617 -41942237 - MLT2E LTR ERVL -498 130 44 24 32 0 0 chr2 208745632 208745663 -41942191 + AT_rich Low_complexity Low_complexity 1 31 0 201 260 60 15 chr2 208745936 208746010 -41941844 + MIR SINE MIR 69 146 -62 33 25 0 0 chr2 208746242 208746282 -41941572 + AT_rich Low_complexity Low_complexity 1 40 0 243 278 0 0 chr2 208746327 208746381 -41941473 + L3 LINE CR1 1462 1515 -62 3593 80 8 4 chr2 208746382 208748824 -41939030 + L1PA7 LINE L1 3539 6151 -3 23 54 0 0 chr2 208750648 208750685 -41937169 + AT_rich Low_complexity Low_complexity 1 37 0 1573 180 26 3 chr2 208750778 208751175 -41936679 - AluJo SINE Alu 0 404 1 449 340 52 17 chr2 208751542 208751774 -41936080 + MIR SINE MIR 23 262 0 234 333 22 0 chr2 208752697 208752787 -41935067 - MIR SINE MIR -22 240 149 2031 121 3 3 chr2 208753167 208753456 -41934398 - AluSc SINE Alu -20 289 1 313 262 98 37 chr2 208754512 208754676 -41933178 - MER5B DNA MER1_type -4 174 1 238 296 74 37 chr2 208755196 208755304 -41932550 - L2 LINE L2 -3 3269 3158 299 344 16 16 chr2 208758634 208758759 -41929095 - L2 LINE L2 0 3272 3148 193 25 0 100 chr2 208759177 208759217 -41928637 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 228 35 0 0 chr2 208759371 208759400 -41928454 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 278 283 88 9 chr2 208760447 208760560 -41927294 - MIR SINE MIR -74 188 67 268 203 0 51 chr2 208761124 208761203 -41926651 + L1MC4 LINE L1 6614 6688 -1354 215 203 17 0 chr2 208761253 208761312 -41926542 + (TA)n Simple_repeat Simple_repeat 1 60 0 209 266 51 51 chr2 208763029 208763108 -41924746 + MIR3 SINE MIR 125 203 -5 375 78 0 0 chr2 208764641 208764692 -41923162 + (CA)n Simple_repeat Simple_repeat 2 52 0 593 314 31 18 chr2 208764878 208765107 -41922747 + MIR SINE MIR 21 252 -10 234 341 121 30 chr2 208765496 208765801 -41922053 + L2 LINE L2 2645 2977 -337 231 383 78 17 chr2 208768228 208768343 -41919511 - L2 LINE L2 -17 3255 3134 712 204 108 12 chr2 208771836 208772003 -41915851 - MER5A DNA MER1_type -1 188 6 202 275 42 3 chr2 208773276 208773409 -41914445 + MER5A DNA MER1_type 9 186 -3 330 313 6 72 chr2 208773419 208773585 -41914269 + MER5A DNA MER1_type 1 155 -34 444 266 173 0 chr2 208773593 208773732 -41914122 + MER5A DNA MER1_type 9 171 -18 186 43 0 0 chr2 208773871 208773894 -41913960 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 690 291 143 44 chr2 208774032 208774377 -41913477 - MER115 DNA AcHobo -158 535 143 2377 73 0 16 chr2 208774377 208774693 -41913161 + AluY SINE Alu 1 311 0 690 291 143 44 chr2 208774693 208774753 -41913101 - MER115 DNA AcHobo -550 143 90 528 274 111 22 chr2 208774880 208775106 -41912748 + MIR SINE MIR 15 260 -2 370 286 45 55 chr2 208775443 208775642 -41912212 - L2 LINE L2 -1261 2053 1857 197 277 62 80 chr2 208776000 208776112 -41911742 - L2 LINE L2 -1860 1454 1345 182 37 37 0 chr2 208776147 208776174 -41911680 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 642 210 154 6 chr2 208777048 208777210 -41910644 - MER5A DNA MER1_type 0 189 4 356 327 68 57 chr2 208777890 208778153 -41909701 + L2 LINE L2 2993 3258 -14 208 321 183 0 chr2 208778276 208778413 -41909441 - MIR3 SINE MIR -6 202 41 22 35 0 0 chr2 208780269 208780298 -41907556 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 208780619 208780641 -41907213 + AT_rich Low_complexity Low_complexity 1 22 0 343 293 12 0 chr2 208780763 208780845 -41907009 - MIR3 SINE MIR -49 159 77 525 292 43 68 chr2 208782208 208782489 -41905365 - L2 LINE L2 -4 3309 3036 21 0 0 0 chr2 208782636 208782657 -41905197 + AT_rich Low_complexity Low_complexity 1 21 0 180 250 83 97 chr2 208783983 208784055 -41903799 + MIR3 SINE MIR 114 184 -24 577 229 188 92 chr2 208784988 208785281 -41902573 - MER102a DNA MER1_type 0 330 10 243 88 0 0 chr2 208785353 208785387 -41902467 + (CA)n Simple_repeat Simple_repeat 2 35 0 25 31 0 0 chr2 208787318 208787350 -41900504 + AT_rich Low_complexity Low_complexity 1 32 0 267 309 0 24 chr2 208788388 208788472 -41899382 + MIR SINE MIR 72 153 -109 417 254 65 55 chr2 208789294 208789557 -41898297 + L1ME4a LINE L1 5634 5901 -220 27 0 0 0 chr2 208789706 208789733 -41898121 + AT_rich Low_complexity Low_complexity 1 27 0 491 106 0 12 chr2 208790649 208790734 -41897120 + (GGGA)n Simple_repeat Simple_repeat 1 84 0 1961 90 9 87 chr2 208790804 208791136 -41896718 + AluSg SINE Alu 3 308 -2 263 231 26 0 chr2 208792449 208792527 -41895327 + (TA)n Simple_repeat Simple_repeat 2 81 0 24 32 0 0 chr2 208792537 208792568 -41895286 + AT_rich Low_complexity Low_complexity 1 31 0 602 256 48 0 chr2 208793304 208793472 -41894382 + MER97b DNA MER1_type? 1 176 -877 360 274 72 116 chr2 208793850 208794127 -41893727 + L1MC4 LINE L1 6696 7002 -1001 23 0 0 0 chr2 208794422 208794445 -41893409 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 208794829 208794857 -41892997 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 208795142 208795173 -41892681 + AT_rich Low_complexity Low_complexity 1 31 0 204 40 0 0 chr2 208795536 208795561 -41892293 + (A)n Simple_repeat Simple_repeat 1 25 0 189 289 0 0 chr2 208795731 208795783 -41892071 - L2 LINE L2 -2012 1302 1251 859 244 53 32 chr2 208796309 208796555 -41891299 - MIR SINE MIR -9 253 3 21 0 0 0 chr2 208797285 208797306 -41890548 + AT_rich Low_complexity Low_complexity 1 21 0 33 25 0 0 chr2 208797471 208797511 -41890343 + AT_rich Low_complexity Low_complexity 1 40 0 564 283 89 21 chr2 208797522 208797764 -41890090 + MIR SINE MIR 1 249 -13 575 312 79 11 chr2 208798409 208798688 -41889166 + LTR16C LTR ERVL 194 491 0 916 195 0 0 chr2 208798993 208799147 -41888707 - FRAM SINE Alu -18 158 5 402 21 0 0 chr2 208799148 208799195 -41888659 + (CA)n Simple_repeat Simple_repeat 2 48 0 412 169 227 13 chr2 208799406 208799560 -41888294 + MER53 DNA DNA 2 188 -1 281 374 58 0 chr2 208799759 208799885 -41887969 + L2 LINE L2 3111 3247 -25 198 118 0 0 chr2 208799885 208799919 -41887935 + (TA)n Simple_repeat Simple_repeat 1 34 0 281 374 58 0 chr2 208799919 208799931 -41887923 + L2 LINE L2 3247 3257 -15 648 144 9 9 chr2 208800225 208800336 -41887518 + FLAM_A SINE Alu 20 130 -12 180 0 0 0 chr2 208800440 208800460 -41887394 + (T)n Simple_repeat Simple_repeat 1 20 0 28 48 0 0 chr2 208801027 208801069 -41886785 + AT_rich Low_complexity Low_complexity 1 42 0 2182 112 3 0 chr2 208801929 208802224 -41885630 - AluSp SINE Alu -17 296 1 2152 298 134 28 chr2 208802234 208803526 -41884328 - L2 LINE L2 -5 3308 1861 722 222 11 53 chr2 208803526 208803715 -41884139 + MER63A DNA MER1_type 1 181 -29 1041 280 85 46 chr2 208804259 208804854 -41883000 + L1ME3A LINE L1 5246 5884 -286 249 264 9 82 chr2 208805120 208805230 -41882624 + L1ME3A LINE L1 5965 6066 -104 1070 180 65 5 chr2 208805388 208805588 -41882266 + AluJo SINE Alu 89 300 -12 5789 70 41 0 chr2 208805599 208806382 -41881472 - L1PA7 LINE L1 -1 6153 5339 192 306 163 33 chr2 208806805 208807050 -41880804 + L2 LINE L2 2688 2964 -350 1723 176 0 23 chr2 208807717 208808018 -41879836 + AluJb SINE Alu 4 297 -15 2105 133 0 0 chr2 208808369 208808685 -41879169 - AluJb SINE Alu 0 316 1 243 0 0 0 chr2 208809532 208809559 -41878295 + (TA)n Simple_repeat Simple_repeat 1 27 0 2003 89 12 4 chr2 208809560 208809818 -41878036 - AluSq SINE Alu -20 293 34 447 315 171 0 chr2 208809961 208810177 -41877677 + MIR SINE MIR 5 257 -5 301 333 17 8 chr2 208811496 208811616 -41876238 - L2 LINE L2 -10 3303 3183 197 274 0 82 chr2 208812669 208812742 -41875112 + MIR3 SINE MIR 99 165 -43 2448 102 0 3 chr2 208812815 208813159 -41874695 + L1PB1 LINE L1 5805 6147 -4 569 327 7 7 chr2 208813240 208813393 -41874461 - MIR3 SINE MIR -23 185 33 377 284 85 14 chr2 208813738 208813879 -41873975 + MIR SINE MIR 4 154 -108 677 54 11 0 chr2 208814126 208814218 -41873636 + L1PA7 LINE L1 6060 6152 -2 1694 215 44 23 chr2 208814882 208815315 -41872539 + MER74A LTR ERVL 117 558 0 898 183 0 0 chr2 208815421 208815563 -41872291 - MER46A DNA MER2_type -94 142 1 276 285 13 99 chr2 208816548 208816699 -41871155 - MLT1K LTR MaLR -158 430 293 734 234 184 65 chr2 208816852 208817377 -41870477 + MLT1H1 LTR MaLR 1 555 0 2094 102 10 20 chr2 208817810 208818114 -41869740 - AluSg SINE Alu -7 303 3 684 106 44 0 chr2 208818133 208818246 -41869608 - L1PA16 LINE L1 -9 6157 6040 2279 95 0 0 chr2 208818310 208818604 -41869250 - AluSc SINE Alu -15 294 1 2202 100 0 0 chr2 208818615 208818941 -41868913 - AluSg SINE Alu 0 326 1 1671 175 13 22 chr2 208819892 208820207 -41867647 - AluJb SINE Alu 0 312 1 598 268 34 38 chr2 208821235 208821474 -41866380 + L2 LINE L2 3076 3313 0 23 0 0 0 chr2 208822300 208822323 -41865531 + AT_rich Low_complexity Low_complexity 1 23 0 363 321 79 6 chr2 208822601 208822765 -41865089 - MIR3 SINE MIR -30 178 2 3501 125 9 9 chr2 208822997 208823573 -41864281 + L1PA16 LINE L1 5615 6308 -4 363 293 9 17 chr2 208823573 208823689 -41864165 + GA-rich Low_complexity Low_complexity 3 117 0 385 197 43 7 chr2 208824851 208825056 -41862798 + MER20B DNA MER1_type 543 781 -2 419 293 26 0 chr2 208825535 208825651 -41862203 + MIR SINE MIR 102 220 -42 2205 118 0 10 chr2 208826847 208827153 -41860701 - AluSg SINE Alu -7 303 1 180 327 39 70 chr2 208827563 208827719 -41860135 + L2 LINE L2 3148 3298 -15 220 373 43 24 chr2 208827908 208828117 -41859737 + L2 LINE L2 2469 2681 -633 * 806 320 73 40 chr2 208828103 208828848 -41859006 - L2 LINE L2 -4 3309 2511 403 331 103 63 chr2 208829062 208829509 -41858345 + L2 LINE L2 2808 3272 0 202 298 36 12 chr2 208830554 208830638 -41857216 - L2 LINE L2 -8 3264 3179 23 33 0 0 chr2 208830913 208830943 -41856911 + AT_rich Low_complexity Low_complexity 1 30 0 217 219 0 0 chr2 208831215 208831256 -41856598 + (TCCA)n Simple_repeat Simple_repeat 4 44 0 1928 143 110 28 chr2 208831755 208832182 -41855672 - MLT1C LTR MaLR 0 467 6 273 250 42 21 chr2 208832271 208832367 -41855487 + LTR33 LTR ERVL 424 521 0 304 335 24 68 chr2 208832807 208833058 -41854796 - L1M4 LINE L1 -2386 3760 3521 25 0 0 0 chr2 208833128 208833153 -41854701 + AT_rich Low_complexity Low_complexity 1 25 0 305 283 33 66 chr2 208833249 208833401 -41854453 - MIR SINE MIR 0 262 116 255 256 67 11 chr2 208833572 208833662 -41854192 - L1P LINE L1 -2867 3279 3185 320 286 110 40 chr2 208833673 208833858 -41853996 - L1M4 LINE L1 -2982 3164 2953 359 139 25 13 chr2 208833858 208833937 -41853917 + MER116 DNA Mariner 1 80 0 320 286 110 40 chr2 208833937 208834024 -41853830 - L1M4 LINE L1 -3193 2953 2873 222 37 0 0 chr2 208834288 208834315 -41853539 + (T)n Simple_repeat Simple_repeat 1 27 0 284 266 46 28 chr2 208834863 208834972 -41852882 + MIR SINE MIR 116 226 -36 217 283 0 0 chr2 208834974 208835027 -41852827 + CT-rich Low_complexity Low_complexity 2 54 0 741 269 88 22 chr2 208835619 208835846 -41852008 - MIR SINE MIR -15 247 6 21 36 0 0 chr2 208836955 208836983 -41850871 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr2 208837366 208837401 -41850453 + AT_rich Low_complexity Low_complexity 1 35 0 27 29 0 0 chr2 208837973 208838007 -41849847 + AT_rich Low_complexity Low_complexity 1 34 0 261 0 0 0 chr2 208838191 208838220 -41849634 + (TG)n Simple_repeat Simple_repeat 2 30 0 181 301 60 24 chr2 208840269 208840352 -41847502 + L2 LINE L2 3080 3165 -107 422 269 134 13 chr2 208840408 208840557 -41847297 + MIR SINE MIR 30 196 -66 1018 256 113 0 chr2 208840564 208840857 -41846997 + MER46C DNA MER2_type 7 332 -6 206 346 19 0 chr2 208840907 208840959 -41846895 + L2 LINE L2 3242 3294 -19 247 323 43 0 chr2 208841043 208841136 -41846718 - MIR SINE MIR -151 111 15 27 49 0 0 chr2 208841774 208841815 -41846039 + AT_rich Low_complexity Low_complexity 1 41 0 12956 86 16 3 chr2 208842040 208844632 -41843222 - L1PA7 LINE L1 -9 6460 3831 17930 116 10 42 chr2 208894633 208898477 -41789377 - L1PA7 LINE L1 -2626 3835 8 353 240 16 80 chr2 208898670 208898795 -41789059 + MLT1H LTR MaLR 238 354 -195 1015 259 0 0 chr2 208899187 208899399 -41788455 - MER58A DNA MER1_type -12 212 1 9639 210 44 17 chr2 208899483 208903099 -41784755 - L1MB1 LINE L1 0 7587 3866 315 213 106 43 chr2 208903103 208903189 -41784665 - L1MC4 LINE L1 -1339 6703 6609 2019 112 0 3 chr2 208903189 208903484 -41784370 - L1PB1 LINE L1 -1 6150 5857 249 200 29 0 chr2 208903690 208903760 -41784094 - L1MB1 LINE L1 -3705 3860 3789 2323 252 55 36 chr2 208903797 208904838 -41783016 - L1MB1 LINE L1 -4345 3220 2153 280 298 36 0 chr2 208904833 208904917 -41782937 - L1MB1 LINE L1 -5804 1682 1596 * 933 43 0 0 chr2 208905678 208905793 -41782061 - L1PA7 LINE L1 -381 5773 5659 2801 45 17 3 chr2 208905793 208906143 -41781711 + L1PA7 LINE L1 5794 6151 -3 733 294 47 5 chr2 208906200 208906414 -41781440 + MIR SINE MIR 19 241 -21 425 295 66 16 chr2 208906649 208906893 -41780961 + L1MC4a LINE L1 4565 4820 -1326 258 231 65 46 chr2 208906995 208907103 -41780751 + L1P LINE L1 4900 5009 -1137 468 293 150 18 chr2 208907555 208907720 -41780134 + L1MC4a LINE L1 5498 5640 -2168 393 22 0 0 chr2 208907720 208907766 -41780088 + (CA)n Simple_repeat Simple_repeat 2 47 0 468 293 150 18 chr2 208907766 208907941 -41779913 + L1MC4a LINE L1 5640 5883 -1925 488 213 96 121 chr2 208907959 208908198 -41779656 - MIR SINE MIR 0 262 30 28 0 0 0 chr2 208908510 208908538 -41779316 + AT_rich Low_complexity Low_complexity 1 28 0 2142 99 31 0 chr2 208909530 208909824 -41778030 + AluSc SINE Alu 1 303 -6 231 344 21 0 chr2 208910229 208910325 -41777529 - L3 LINE CR1 -1 1576 1479 488 133 10 41 chr2 208910768 208910866 -41776988 - L1PB4 LINE L1 -13 6143 6049 3110 128 38 2 chr2 208911032 208911534 -41776320 - L1PB4 LINE L1 -125 6031 5512 * 5390 38 1 1 chr2 208911531 208912191 -41775663 - L1PA4 LINE L1 -1077 5069 4410 * 6645 52 3 20 chr2 208912182 208913262 -41774592 + L1PA4 LINE L1 5070 6126 -29 1264 20 0 0 chr2 208913368 208913515 -41774339 + L1PA5 LINE L1 6004 6150 -4 316 109 0 0 chr2 208913515 208913570 -41774284 - L1PB4 LINE L1 -632 5524 5470 1006 97 13 0 chr2 208913623 208913777 -41774077 - L1PB4 LINE L1 -679 5477 5322 * 2765 202 18 3 chr2 208913773 208914388 -41773466 + L1 LINE L1 4751 5374 -772 479 264 54 20 chr2 208914814 208914962 -41772892 - MER105 DNA DNA -42 162 10 181 288 51 0 chr2 208915275 208915334 -41772520 - L2 LINE L2 -1389 1925 1864 180 111 0 0 chr2 208915411 208915438 -41772416 + (T)n Simple_repeat Simple_repeat 1 27 0 355 317 40 25 chr2 208915506 208915705 -41772149 - L3 LINE CR1 -151 1426 1225 296 247 93 31 chr2 208915710 208915807 -41772047 - MIR SINE MIR -70 138 36 1703 96 116 0 chr2 208916176 208916427 -41771427 - AluSx SINE Alu -6 306 27 1536 182 55 3 chr2 208916480 208916771 -41771083 - AluJb SINE Alu -6 306 1 283 262 16 0 chr2 208916982 208917043 -41770811 + L2 LINE L2 3246 3307 -6 225 0 0 0 chr2 208917279 208917304 -41770550 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 261 0 0 0 chr2 208917303 208917332 -41770522 + (TG)n Simple_repeat Simple_repeat 1 29 0 297 0 0 0 chr2 208917976 208918009 -41769845 + (CA)n Simple_repeat Simple_repeat 1 33 0 395 344 47 10 chr2 208920910 208921102 -41766752 + MIR SINE MIR 20 218 -44 261 0 0 0 chr2 208921300 208921329 -41766525 + (TG)n Simple_repeat Simple_repeat 2 30 0 230 152 0 0 chr2 208921329 208921375 -41766479 - LTR66 LTR ERVL -171 439 394 294 281 25 12 chr2 208921375 208921535 -41766319 + (TA)n Simple_repeat Simple_repeat 2 163 0 714 248 49 44 chr2 208921996 208922434 -41765420 + MLT1D LTR MaLR 18 505 0 532 340 132 39 chr2 208922832 208923188 -41764666 + L2 LINE L2 2882 3270 -2 228 86 0 0 chr2 208925375 208925410 -41762444 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr2 208927422 208927450 -41760404 + AT_rich Low_complexity Low_complexity 1 28 0 326 409 61 0 chr2 208931647 208931811 -41756043 - L2 LINE L2 -1 3271 3098 388 213 53 6 chr2 208931812 208931978 -41755876 + L1MA9 LINE L1 6021 6290 -22 23 68 0 0 chr2 208933073 208933117 -41754737 + AT_rich Low_complexity Low_complexity 1 44 0 244 141 16 47 chr2 208933492 208933556 -41754298 - L1MCa LINE L1 -4362 2064 2003 284 232 30 10 chr2 208933580 208933679 -41754175 + (TA)n Simple_repeat Simple_repeat 1 101 0 23 33 0 0 chr2 208933695 208933725 -41754129 + AT_rich Low_complexity Low_complexity 1 30 0 581 240 176 5 chr2 208933752 208933956 -41753898 - L1ME1 LINE L1 -5 6161 5923 2299 50 0 3 chr2 208934386 208934696 -41753158 - AluY SINE Alu 0 310 2 247 382 11 0 chr2 208934857 208934946 -41752908 + L2 LINE L2 3224 3313 0 197 288 0 61 chr2 208934998 208935064 -41752790 + MIR SINE MIR 195 256 -6 185 288 85 17 chr2 208935552 208935611 -41752243 - L2 LINE L2 -1 3271 3209 232 167 24 0 chr2 208935646 208935688 -41752166 - MIR3 SINE MIR -13 195 153 250 165 49 49 chr2 208937989 208938153 -41749701 + (TA)n Simple_repeat Simple_repeat 1 164 0 23 54 0 0 chr2 208939498 208939535 -41748319 + AT_rich Low_complexity Low_complexity 1 37 0 435 329 37 0 chr2 208940260 208940424 -41747430 - MIR SINE MIR -7 255 86 268 267 0 40 chr2 208941323 208941398 -41746456 + L2 LINE L2 3201 3272 0 558 0 0 0 chr2 208942936 208942998 -41744856 + (TC)n Simple_repeat Simple_repeat 1 62 0 1289 269 119 20 chr2 208943232 208943593 -41744261 + LTR16A LTR ERVL 18 423 -27 2788 189 14 4 chr2 208943593 208944107 -41743747 - MLT2B1 LTR ERVL 0 520 2 1289 269 119 20 chr2 208944107 208944139 -41743715 + LTR16A LTR ERVL 423 450 0 316 279 50 67 chr2 208945531 208945710 -41742144 - L2 LINE L2 -1 3312 3137 181 254 68 17 chr2 208945742 208945801 -41742053 + L2 LINE L2 3251 3312 -1 676 339 23 7 chr2 208945801 208946102 -41741752 - L2 LINE L2 -169 3144 2839 311 426 63 11 chr2 208946162 208946432 -41741422 - L3 LINE CR1 -1259 318 35 279 284 53 0 chr2 208946907 208947002 -41740852 - MER102a DNA MER1_type -33 297 198 2212 200 49 0 chr2 208947075 208947520 -41740334 - MLT1C LTR MaLR 0 467 1 1852 116 0 0 chr2 208948720 208948993 -41738861 - AluSg SINE Alu 0 312 40 21 0 0 0 chr2 208949085 208949106 -41738748 + AT_rich Low_complexity Low_complexity 1 21 0 347 302 11 50 chr2 208949265 208949444 -41738410 - LTR67 LTR ERVL 0 557 386 1180 207 75 12 chr2 208950033 208950352 -41737502 + MER2 DNA MER2_type 5 343 -1 432 337 111 14 chr2 208950448 208950727 -41737127 - ERVL LTR ERVL -341 5423 5118 630 305 56 0 chr2 208950781 208950978 -41736876 - ERVL LTR ERVL -765 4999 4792 433 302 79 13 chr2 208951233 208951476 -41736378 - ERVL LTR ERVL -1049 4609 4348 255 339 48 32 chr2 208952757 208952881 -41734973 - L2 LINE L2 -8 3264 3139 454 336 77 62 chr2 208953161 208953949 -41733905 - L2 LINE L2 -425 2889 2090 252 247 13 0 chr2 208955365 208955442 -41732412 + L1M4 LINE L1 3630 3707 -2439 29 28 0 0 chr2 208955445 208955481 -41732373 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 208955542 208955564 -41732290 + AT_rich Low_complexity Low_complexity 1 22 0 266 318 0 0 chr2 208955586 208955671 -41732183 + L1M4 LINE L1 3770 3854 -2292 394 278 56 29 chr2 208956641 208956864 -41730990 + L1P LINE L1 4050 4277 -1869 416 294 82 38 chr2 208956913 208957348 -41730506 + L1M4 LINE L1 4378 4830 -1316 2834 56 8 13 chr2 208957782 208958160 -41729694 + L1PA7 LINE L1 5771 6146 -8 2307 86 0 3 chr2 208958165 208958492 -41729362 + AluY SINE Alu 1 326 0 1378 234 58 16 chr2 208958755 208959131 -41728723 - L1ME1 LINE L1 -5 6161 5770 325 339 39 0 chr2 208959145 208959272 -41728582 - MIR SINE MIR -75 187 56 387 331 6 28 chr2 208960436 208960614 -41727240 - MER5B DNA MER1_type 0 178 5 953 191 48 0 chr2 208960989 208961198 -41726656 - MER20B DNA MER1_type 0 219 1 1927 78 24 20 chr2 208961403 208961698 -41726156 + L1MA1 LINE L1 6006 6301 -1 2260 128 5 35 chr2 208961994 208962369 -41725485 + THE1B LTR MaLR 1 364 0 750 11 0 0 chr2 208962440 208962527 -41725327 + (TTC)n Simple_repeat Simple_repeat 1 87 0 268 140 20 0 chr2 208962549 208962599 -41725255 - Alu SINE Alu -5 297 247 255 31 0 0 chr2 208962652 208962684 -41725170 + (GA)n Simple_repeat Simple_repeat 1 32 0 21 0 0 0 chr2 208963401 208963422 -41724432 + AT_rich Low_complexity Low_complexity 1 21 0 256 213 140 66 chr2 208963423 208963559 -41724295 + L1ME4a LINE L1 5930 6075 -46 1963 137 61 9 chr2 208963600 208963943 -41723911 + MER46B DNA MER2_type 1 236 0 675 293 18 40 chr2 208963955 208964177 -41723677 - MIR SINE MIR -30 232 16 23 0 0 0 chr2 208964714 208964737 -41723117 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 208965174 208965202 -41722652 + AT_rich Low_complexity Low_complexity 1 28 0 6653 78 45 2 chr2 208965617 208966882 -41720972 - L1PA11 LINE L1 -8 6166 4871 333 269 30 104 chr2 208967022 208967290 -41720564 + MER112 DNA MER1_type 1 248 -12 22 0 0 0 chr2 208967493 208967515 -41720339 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 208968595 208968619 -41719235 + AT_rich Low_complexity Low_complexity 1 24 0 242 321 0 49 chr2 208969766 208969847 -41718007 + L2 LINE L2 3196 3272 0 21 0 0 0 chr2 208970549 208970570 -41717284 + AT_rich Low_complexity Low_complexity 1 21 0 454 349 75 14 chr2 208971386 208971598 -41716256 - MIR SINE MIR -16 246 22 863 166 26 0 chr2 208972145 208972296 -41715558 - MER5A DNA MER1_type 0 189 35 307 295 11 21 chr2 208972305 208972400 -41715454 - MIR SINE MIR -89 173 80 556 224 89 34 chr2 208973159 208973338 -41714516 + MER5A DNA MER1_type 1 189 0 208 216 0 0 chr2 208973852 208973889 -41713965 + (TG)n Simple_repeat Simple_repeat 2 38 0 235 233 0 58 chr2 208973904 208974007 -41713847 - L1MC4 LINE L1 -1334 6708 6612 696 307 89 17 chr2 208974397 208974924 -41712930 - L1ME3A LINE L1 -299 5871 5307 662 249 131 20 chr2 208975200 208975558 -41712296 - L1ME3A LINE L1 -1112 5034 4637 26 0 0 0 chr2 208975721 208975747 -41712107 + AT_rich Low_complexity Low_complexity 1 26 0 192 77 0 0 chr2 208976245 208976271 -41711583 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2482 48 0 10 chr2 208976862 208977176 -41710678 + AluY SINE Alu 1 311 0 367 204 0 107 chr2 208977535 208977638 -41710216 + MER92B LTR ERV1 1 92 -544 2513 43 3 3 chr2 208977642 208977947 -41709907 - AluY SINE Alu -6 305 1 422 167 0 0 chr2 208978143 208978215 -41709639 + MER92C LTR ERV1 481 552 -2 659 263 45 41 chr2 208978569 208978812 -41709042 - L1ME3A LINE L1 -28 6142 5899 258 300 91 51 chr2 208978824 208979140 -41708714 - L1ME3A LINE L1 -367 5803 5469 * 2117 254 64 18 chr2 208979109 208979714 -41708140 - L1ME1 LINE L1 -196 6230 5548 2441 63 3 0 chr2 208979714 208980014 -41707840 - AluSp SINE Alu -12 301 1 2117 254 64 18 chr2 208980014 208980474 -41707380 - L1ME1 LINE L1 -878 5548 5111 30 0 0 0 chr2 208980562 208980592 -41707262 + AT_rich Low_complexity Low_complexity 1 30 0 1307 235 37 0 chr2 208980592 208980916 -41706938 - L1MA4 LINE L1 -2 6298 5963 1246 228 120 4 chr2 208981126 208981577 -41706277 - L1ME1 LINE L1 -2721 3685 3183 326 95 0 0 chr2 208981577 208981619 -41706235 - 5S rRNA rRNA -79 42 1 366 187 0 0 chr2 208981621 208981696 -41706158 - L1ME1 LINE L1 -3209 3197 3123 23 33 0 0 chr2 208981787 208981817 -41706037 + AT_rich Low_complexity Low_complexity 1 30 0 1156 267 68 60 chr2 208981872 208982517 -41705337 - L1ME1 LINE L1 -4987 1422 773 296 339 101 4 chr2 208983171 208983398 -41704456 - L1MEd LINE L1 -4885 1499 1251 516 339 71 32 chr2 208983411 208983904 -41703950 - L1MEd LINE L1 -5011 1361 850 273 57 0 0 chr2 208985262 208985297 -41702557 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr2 208985431 208985459 -41702395 + AT_rich Low_complexity Low_complexity 1 28 0 247 257 43 0 chr2 208986453 208986523 -41701331 + MIR SINE MIR 104 176 -86 355 270 79 0 chr2 208986597 208986686 -41701168 - MER5A DNA MER1_type -84 105 10 27 0 0 0 chr2 208987071 208987098 -41700756 + AT_rich Low_complexity Low_complexity 1 27 0 189 0 0 0 chr2 208988599 208988620 -41699234 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 599 278 25 40 chr2 208988787 208988985 -41698869 + MLT1J1 LTR MaLR 1 195 -251 205 88 29 0 chr2 208989424 208989458 -41698396 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 548 175 33 71 chr2 208989498 208989681 -41698173 + MER53 DNA DNA 8 183 -6 283 224 103 28 chr2 208990506 208990613 -41697241 - MER103 DNA DNA -49 117 3 38 51 0 0 chr2 208992694 208992753 -41695101 + AT_rich Low_complexity Low_complexity 1 59 0 180 351 75 35 chr2 208993434 208993608 -41694246 + L2 LINE L2 2867 3047 -225 490 299 62 6 chr2 208994058 208994235 -41693619 - MIR SINE MIR -37 225 39 3085 179 116 19 chr2 208996159 208996885 -41690969 - L1MB8 LINE L1 0 6178 5383 * 29271 26 2 0 chr2 208996884 209001186 -41686668 - L1PA2 LINE L1 0 6155 1865 1916 38 0 0 chr2 209001186 209001421 -41686433 + L1PA2 LINE L1 1610 1844 -4302 355 185 0 0 chr2 209001417 209001482 -41686372 - L1MB8 LINE L1 -780 5398 5334 * 1535 167 25 25 chr2 209001483 209001800 -41686054 - THE1C LTR MaLR 0 375 59 227 197 30 15 chr2 209001891 209001957 -41685897 + (TA)n Simple_repeat Simple_repeat 1 67 0 1101 159 66 78 chr2 209001970 209002303 -41685551 - L1MB8 LINE L1 -920 5226 4898 240 381 22 36 chr2 209002509 209002648 -41685206 + MIR3 SINE MIR 23 159 -49 236 254 51 68 chr2 209002729 209002847 -41685007 + LTR16C LTR ERVL 73 188 -303 516 299 25 10 chr2 209002884 209003085 -41684769 + LTR16A1 LTR ERVL 254 457 0 577 145 77 0 chr2 209003132 209003249 -41684605 + L1M4 LINE L1 4933 5058 -1088 258 91 0 0 chr2 209004231 209004264 -41683590 - MLT2D LTR ERVL -2 412 380 2286 186 27 54 chr2 209004270 209004790 -41683064 - MLT2B2 LTR ERVL -9 506 1 303 206 79 0 chr2 209004822 209004885 -41682969 - L1M4 LINE L1 -1016 5130 5063 496 325 57 42 chr2 209004986 209005251 -41682603 + MLT1J2 LTR MaLR 64 332 -118 206 262 36 48 chr2 209005316 209005400 -41682454 - MER5A DNA MER1_type 0 189 107 5504 20 0 0 chr2 209007010 209007672 -41680182 - L1PA3 LINE L1 -753 5393 4732 * 6652 23 0 0 chr2 209007668 209008460 -41679394 + L1PA3 LINE L1 5384 6175 0 1509 167 0 0 chr2 209008862 209009119 -41678735 + AluSx SINE Alu 53 309 0 24 32 0 0 chr2 209009162 209009193 -41678661 + AT_rich Low_complexity Low_complexity 1 31 0 204 270 112 11 chr2 209012276 209012365 -41675489 - MIR SINE MIR 0 262 165 344 308 147 8 chr2 209012421 209012625 -41675229 - MIR SINE MIR -5 257 20 5586 139 31 24 chr2 209012683 209013125 -41674729 - L1MA5 LINE L1 -6 6294 5857 1903 144 6 54 chr2 209013125 209013478 -41674376 + MER1B DNA MER1_type 1 336 -1 5586 139 31 24 chr2 209013478 209014475 -41673379 - L1MA5 LINE L1 -443 5857 4840 12665 116 20 15 chr2 209014480 209014684 -41673170 - Tigger1 DNA MER2_type -4 2414 2212 1620 155 45 11 chr2 209014684 209014949 -41672905 + AluSx SINE Alu 11 284 -28 279 0 0 0 chr2 209014952 209014983 -41672871 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 12665 116 20 15 chr2 209014983 209016717 -41671137 - Tigger1 DNA MER2_type -207 2211 463 1535 189 16 6 chr2 209016717 209017019 -41670835 + L1PA15 LINE L1 3352 3659 -2487 2063 174 71 0 chr2 209017019 209017415 -41670439 - MSTA LTR MaLR 0 428 5 2655 163 29 17 chr2 209017417 209017896 -41669958 - MSTA-int LTR MaLR 0 1651 1167 1419 198 54 97 chr2 209017898 209018342 -41669512 - MLT2B3 LTR ERVL -129 425 1 241 65 0 65 chr2 209018342 209018388 -41669466 + L1PA15 LINE L1 3653 3695 -2451 7454 169 20 39 chr2 209018402 209020958 -41666896 + L1PA15 LINE L1 3673 6165 0 2634 166 37 2 chr2 209020962 209021420 -41666434 - Tigger1 DNA MER2_type -1943 475 2 7458 151 55 2 chr2 209021421 209022862 -41664992 - L1MA5 LINE L1 -1306 4840 3324 605 262 59 50 chr2 209023175 209023396 -41664458 + Charlie8 DNA MER1_type 41 263 -2154 1860 132 28 19 chr2 209025191 209025555 -41662299 - L1MA8 LINE L1 0 6291 5925 23 0 0 0 chr2 209025885 209025908 -41661946 + AT_rich Low_complexity Low_complexity 1 23 0 335 178 59 69 chr2 209026623 209026724 -41661130 + MIR SINE MIR 157 256 -6 228 224 45 15 chr2 209026927 209026994 -41660860 - L2 LINE L2 -697 2617 2549 531 260 137 10 chr2 209027033 209027237 -41660617 + MIR SINE MIR 33 262 0 674 172 74 0 chr2 209027401 209027523 -41660331 + FLAM_C SINE Alu 3 133 -10 23 0 0 0 chr2 209027524 209027547 -41660307 + AT_rich Low_complexity Low_complexity 1 23 0 186 188 0 0 chr2 209028396 209028428 -41659426 - L2 LINE L2 -13 3300 3269 311 285 83 52 chr2 209028542 209028735 -41659119 - L1ME4a LINE L1 -11 6110 5912 267 309 0 0 chr2 209028797 209028881 -41658973 - L1ME4a LINE L1 -296 5825 5742 388 335 55 37 chr2 209029262 209029587 -41658267 - L1ME4a LINE L1 -1088 5058 4728 367 304 89 0 chr2 209029603 209029738 -41658116 - L2 LINE L2 -9 3304 3158 650 304 80 85 chr2 209029844 209031231 -41656623 - L1ME4a LINE L1 -1458 4688 3135 2158 113 7 0 chr2 209031231 209031533 -41656321 - AluSg SINE Alu -6 304 1 650 304 80 85 chr2 209031533 209031786 -41656068 - L1ME4a LINE L1 -3011 3135 2882 225 132 0 0 chr2 209031824 209031862 -41655992 + (TA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr2 209031890 209031911 -41655943 + AT_rich Low_complexity Low_complexity 1 21 0 302 205 313 18 chr2 209031929 209032041 -41655813 - L1ME4a LINE L1 -3325 2821 2677 277 264 42 0 chr2 209032405 209032477 -41655377 + MLT1L LTR MaLR 3 77 -538 246 111 0 44 chr2 209032876 209032921 -41654933 + MLT1L LTR MaLR 568 610 -5 283 120 0 40 chr2 209032993 209033043 -41654811 + MLT1L LTR MaLR 568 615 0 482 279 27 20 chr2 209033229 209033376 -41654478 - MIR SINE MIR -4 258 111 346 98 20 0 chr2 209033390 209033441 -41654413 - MER75 DNA T2_type 0 514 463 286 307 13 0 chr2 209033464 209033539 -41654315 - MIR SINE MIR -186 76 1 329 252 126 0 chr2 209034268 209034387 -41653467 + MIR SINE MIR 74 207 -55 815 288 67 4 chr2 209034410 209034650 -41653204 - MIR SINE MIR -3 259 5 25 65 0 0 chr2 209034701 209034747 -41653107 + AT_rich Low_complexity Low_complexity 1 46 0 1331 203 34 7 chr2 209034903 209035199 -41652655 - L1MD1 LINE L1 0 6242 5939 405 58 0 0 chr2 209037704 209037756 -41650098 + (TG)n Simple_repeat Simple_repeat 1 52 0 2169 107 3 7 chr2 209039412 209039712 -41648142 - AluSx SINE Alu -13 299 1 322 280 119 14 chr2 209040107 209040250 -41647604 - MIR SINE MIR 0 262 105 1130 272 64 80 chr2 209040773 209041383 -41646471 - MER45C DNA AcHobo -353 600 1 1702 176 34 14 chr2 209041410 209041706 -41646148 + AluJo SINE Alu 1 302 -10 2031 166 55 29 chr2 209041842 209042378 -41645476 - MLT2A2 LTR ERVL 0 554 1 2268 87 0 7 chr2 209042565 209042865 -41644989 + AluY SINE Alu 1 298 -13 6460 60 30 0 chr2 209043280 209044737 -41643117 + L1PA7 LINE L1 4659 6141 -13 261 326 163 8 chr2 209045397 209045526 -41642328 - MIR SINE MIR -94 168 20 5063 135 25 2 chr2 209046349 209048036 -41639818 - L1PA15 LINE L1 -2 6163 4441 2752 196 11 2 chr2 209048043 209048583 -41639271 + L1PA15 LINE L1 3881 4425 -1721 181 272 12 74 chr2 209050951 209051032 -41636822 + L2 LINE L2 3192 3267 -5 351 157 29 0 chr2 209051527 209051597 -41636257 - FLAM_A SINE Alu 0 133 62 12706 102 8 2 chr2 209051615 209054251 -41633603 - L1PA8 LINE L1 0 6172 3511 243 0 0 0 chr2 209054251 209054278 -41633576 + (T)n Simple_repeat Simple_repeat 1 27 0 524 302 99 60 chr2 209054499 209054953 -41632901 - MLT1J LTR MaLR -27 484 13 217 303 61 0 chr2 209055221 209055287 -41632567 - MIR3 SINE MIR -31 177 108 2240 74 18 3 chr2 209055287 209055572 -41632282 + AluSg SINE Alu 6 294 -16 203 261 0 0 chr2 209056530 209056576 -41631278 + CT-rich Low_complexity Low_complexity 3 48 0 403 341 54 8 chr2 209056577 209056706 -41631148 - L2 LINE L2 -1 3271 3137 303 28 0 0 chr2 209057198 209057234 -41630620 + (GA)n Simple_repeat Simple_repeat 2 37 0 191 75 75 0 chr2 209058123 209058163 -41629691 + A-rich Low_complexity Low_complexity 2 44 0 207 0 0 0 chr2 209059099 209059122 -41628732 + (A)n Simple_repeat Simple_repeat 1 23 0 246 308 0 11 chr2 209060124 209060215 -41627639 + (TA)n Simple_repeat Simple_repeat 2 91 0 21 0 0 0 chr2 209060822 209060843 -41627011 + AT_rich Low_complexity Low_complexity 1 21 0 1890 166 0 0 chr2 209062163 209062470 -41625384 + AluJb SINE Alu 6 312 0 959 147 11 17 chr2 209112636 209112813 -41575041 + MER51A LTR ERV1 53 228 -406 450 0 0 0 chr2 209113241 209113291 -41574563 + (TA)n Simple_repeat Simple_repeat 1 50 0 201 74 0 0 chr2 209113404 209113431 -41574423 + (TC)n Simple_repeat Simple_repeat 2 28 0 402 21 0 0 chr2 209113559 209113606 -41574248 + (TA)n Simple_repeat Simple_repeat 1 47 0 * 423 0 0 0 chr2 209113605 209113652 -41574202 + (GA)n Simple_repeat Simple_repeat 2 48 0 925 143 0 0 chr2 209115843 209115976 -41571878 + AluSq/x SINE Alu 1 133 -180 219 188 0 0 chr2 209115976 209116024 -41571830 + A-rich Low_complexity Low_complexity 1 48 0 202 139 0 70 chr2 209116943 209116986 -41570868 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 1326 306 63 23 chr2 209119057 209119704 -41568150 + Charlie7 DNA MER1_type 1 673 -1939 287 144 29 58 chr2 209119715 209119819 -41568035 + (TTATA)n Simple_repeat Simple_repeat 5 105 0 236 254 0 23 chr2 209120136 209120313 -41567541 + GA-rich Low_complexity Low_complexity 4 176 0 264 324 128 20 chr2 209121288 209121538 -41566316 + L2 LINE L2 2994 3270 -2 197 195 24 0 chr2 209121543 209121584 -41566270 + L2 LINE L2 3230 3271 -1 618 99 0 0 chr2 209121819 209121900 -41565954 + AluSx SINE Alu 2 82 -230 2318 27 73 0 chr2 209121900 209122201 -41565653 + L1P LINE L1 1398 1720 -4426 1518 144 0 4 chr2 209122201 209122430 -41565424 + AluSx SINE Alu 66 293 -19 2184 119 0 10 chr2 209122435 209122719 -41565135 + AluSg SINE Alu 1 283 -27 234 0 0 0 chr2 209122719 209122745 -41565109 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2184 119 0 10 chr2 209122745 209122772 -41565082 + AluSg SINE Alu 283 309 -1 852 154 56 0 chr2 209124237 209124399 -41563455 - L1MA6 LINE L1 0 6300 6130 477 252 122 0 chr2 209124566 209124697 -41563157 + MIR SINE MIR 111 257 -5 17866 88 11 1 chr2 209124712 209128023 -41559831 + L1PA7 LINE L1 2830 6150 -4 2346 99 0 3 chr2 209128665 209128977 -41558877 - AluY SINE Alu 0 311 1 22 0 0 0 chr2 209129986 209130008 -41557846 + AT_rich Low_complexity Low_complexity 1 22 0 2215 108 10 3 chr2 209130008 209130315 -41557539 - AluSc SINE Alu 0 309 1 2187 106 0 0 chr2 209130566 209130920 -41556934 + AluY SINE Alu 1 354 0 187 300 33 17 chr2 209131184 209131244 -41556610 - MIR3 SINE MIR -11 197 137 198 231 0 0 chr2 209131490 209131529 -41556325 - MIR SINE MIR -165 97 59 2409 99 0 10 chr2 209133164 209133478 -41554376 - AluSx SINE Alu -1 311 1 1605 172 0 91 chr2 209133885 209134216 -41553638 + AluJb SINE Alu 1 301 -11 4964 45 2 0 chr2 209134374 209134973 -41552881 + L1PA5 LINE L1 5550 6149 -5 586 216 75 112 chr2 209135234 209135512 -41552342 + MER102a DNA MER1_type 61 328 -2 2274 137 101 0 chr2 209138662 209139049 -41548805 - MSTC LTR MaLR 0 428 3 22 70 0 0 chr2 209139720 209139763 -41548091 + AT_rich Low_complexity Low_complexity 1 43 0 583 294 100 48 chr2 209139893 209139983 -41547871 + MLT1L LTR MaLR 3 87 -528 1839 169 0 16 chr2 209139983 209140290 -41547564 + AluJb SINE Alu 1 302 -10 583 294 100 48 chr2 209140290 209140529 -41547325 + MLT1L LTR MaLR 87 349 -266 309 277 57 35 chr2 209140555 209140696 -41547158 + MLT1L LTR MaLR 472 615 0 332 319 74 18 chr2 209143222 209143385 -41544469 - MER5B DNA MER1_type -6 172 1 1079 286 35 27 chr2 209143913 209144395 -41543459 + L1ME4a LINE L1 5485 5970 -151 207 204 0 0 chr2 209144397 209144446 -41543408 + (TA)n Simple_repeat Simple_repeat 1 49 0 327 256 26 42 chr2 209144477 209144668 -41543186 + L1ME4a LINE L1 5934 6121 0 514 270 13 25 chr2 209144878 209145038 -41542816 - MIR SINE MIR -16 246 87 284 250 196 0 chr2 209148362 209148474 -41539380 - MIR SINE MIR -114 148 15 308 283 11 54 chr2 209148564 209148656 -41539198 - L2 LINE L2 -1 3312 3225 1411 220 99 51 chr2 209148885 209149398 -41538456 + MLT1F LTR MaLR 3 540 -2 212 216 0 39 chr2 209149503 209149554 -41538300 + GA-rich Low_complexity Low_complexity 4 52 0 21 36 0 0 chr2 209151185 209151213 -41536641 + AT_rich Low_complexity Low_complexity 1 28 0 320 254 127 27 chr2 209151288 209151398 -41536456 - L2 LINE L2 -10 3262 3142 425 66 16 0 chr2 209151581 209151642 -41536212 + (TG)n Simple_repeat Simple_repeat 2 63 0 384 279 36 0 chr2 209151768 209151879 -41535975 - L2 LINE L2 -452 2862 2748 1924 191 98 34 chr2 209152204 209152675 -41535179 + MLT1D LTR MaLR 1 501 -4 2472 67 0 10 chr2 209153041 209153353 -41534501 + AluY SINE Alu 1 309 -2 264 272 11 65 chr2 209154083 209154175 -41533679 - L2 LINE L2 -18 3254 3168 255 336 78 23 chr2 209154412 209154540 -41533314 - MIR3 SINE MIR -45 163 29 429 277 109 70 chr2 209154977 209155490 -41532364 + L2 LINE L2 1255 1787 -1527 2117 100 4 4 chr2 209155806 209156087 -41531767 - AluSq SINE Alu -32 281 1 326 289 34 27 chr2 209156193 209156342 -41531512 - L1MC4a LINE L1 -1936 5872 5723 326 317 37 30 chr2 209156462 209156626 -41531228 - L1MC4a LINE L1 -862 5497 5333 312 315 124 43 chr2 209156627 209157087 -41530767 - MLT1J LTR MaLR 0 511 15 1058 275 109 38 chr2 209157270 209157811 -41530043 - L2 LINE L2 -3 3310 2809 2043 127 3 19 chr2 209157811 209158125 -41529729 + AluSc SINE Alu 1 309 0 1058 275 109 38 chr2 209158125 209158521 -41529333 - L2 LINE L2 -504 2809 2137 1706 191 3 7 chr2 209158916 209159209 -41528645 + AluSx SINE Alu 6 297 -15 539 273 33 33 chr2 209160025 209160208 -41527646 - MIR SINE MIR 0 262 80 605 236 0 0 chr2 209160283 209160393 -41527461 - FRAM SINE Alu -74 102 1 277 326 47 0 chr2 209160843 209160929 -41526925 + L2 LINE L2 3117 3206 -66 1685 143 12 65 chr2 209161148 209161470 -41526384 + AluJo SINE Alu 1 305 -7 1658 156 10 55 chr2 209162002 209162310 -41525544 + AluSx SINE Alu 1 294 -18 537 307 107 5 chr2 209164271 209164486 -41523368 - MIR SINE MIR -6 256 20 1394 169 11 15 chr2 209164520 209164780 -41523074 - AluJo SINE Alu -14 298 40 213 175 0 0 chr2 209165491 209165531 -41522323 + (TA)n Simple_repeat Simple_repeat 2 41 0 198 294 0 39 chr2 209166098 209166149 -41521705 - L2 LINE L2 -87 3185 3137 2048 114 7 29 chr2 209168751 209169059 -41518795 + AluSx SINE Alu 1 301 -11 274 259 231 34 chr2 209169063 209169210 -41518644 + MIR SINE MIR 1 176 -86 22 0 0 0 chr2 209171409 209171431 -41516423 + AT_rich Low_complexity Low_complexity 1 22 0 432 0 0 0 chr2 209172515 209172563 -41515291 + (TGGA)n Simple_repeat Simple_repeat 3 50 0 993 209 51 24 chr2 209173159 209173413 -41514441 + MIR SINE MIR 1 261 -1 34 0 0 0 chr2 209173414 209173448 -41514406 + AT_rich Low_complexity Low_complexity 1 34 0 204 239 0 0 chr2 209174099 209174145 -41513709 + (CTATT)n Simple_repeat Simple_repeat 1 46 0 904 291 93 15 chr2 209174227 209174560 -41513294 - L2 LINE L2 -3 3310 2952 495 298 32 13 chr2 209174561 209174719 -41513135 + MIR SINE MIR 70 230 -32 247 382 0 0 chr2 209174907 209174996 -41512858 + MIR SINE MIR 56 144 -118 1865 159 0 7 chr2 209175005 209175307 -41512547 + AluJb SINE Alu 1 300 -12 30 27 0 0 chr2 209175889 209175926 -41511928 + AT_rich Low_complexity Low_complexity 1 37 0 996 285 236 24 chr2 209176141 209176379 -41511475 - L2 LINE L2 -1 3312 3126 2379 99 0 0 chr2 209176379 209176683 -41511171 - AluSx SINE Alu -8 304 1 996 285 236 24 chr2 209176683 209177404 -41510450 - L2 LINE L2 -187 3126 2158 803 167 0 23 chr2 209177441 209177573 -41510281 + FLAM_C SINE Alu 1 129 -14 337 278 110 92 chr2 209177594 209177959 -41509895 - L2 LINE L2 -1210 2104 1720 818 141 0 0 chr2 209177959 209178087 -41509767 + FLAM_A SINE Alu 1 128 -5 337 278 110 92 chr2 209178087 209178364 -41509490 - L2 LINE L2 -1594 1720 1450 252 122 0 0 chr2 209180671 209180712 -41507142 + (GGGGA)n Simple_repeat Simple_repeat 1 41 0 283 263 217 20 chr2 209183715 209183867 -41503987 + MER5A DNA MER1_type 4 185 -4 277 326 23 0 chr2 209184210 209184296 -41503558 - L2 LINE L2 -3 3310 3223 726 224 47 22 chr2 209184396 209184628 -41503226 + MER20B DNA MER1_type 545 782 -1 310 337 190 4 chr2 209186961 209187095 -41500759 + L2 LINE L2 3008 3116 -197 1775 161 0 17 chr2 209187095 209187394 -41500460 + AluJo SINE Alu 1 294 -18 310 337 190 4 chr2 209187394 209187517 -41500337 + L2 LINE L2 3116 3313 0 292 328 129 9 chr2 209187875 209187991 -41499863 + L2 LINE L2 3143 3272 0 31 0 0 0 chr2 209193517 209193548 -41494306 + AT_rich Low_complexity Low_complexity 1 31 0 183 139 0 0 chr2 209194272 209194308 -41493546 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 1029 193 68 14 chr2 209196453 209196660 -41491194 + MER20 DNA MER1_type 2 219 0 334 169 96 0 chr2 209198100 209198183 -41489671 - MIR3 SINE MIR -13 195 105 507 256 137 12 chr2 209198417 209198585 -41489269 + MIR SINE MIR 17 205 -57 287 222 0 0 chr2 209198656 209198710 -41489144 + MIR SINE MIR 209 262 0 299 305 110 38 chr2 209198847 209199083 -41488771 - MIR SINE MIR 0 262 10 257 106 0 21 chr2 209199716 209199763 -41488091 + (TG)n Simple_repeat Simple_repeat 2 47 0 432 244 78 0 chr2 209203126 209203241 -41484613 - L2 LINE L2 0 3313 3190 24 0 0 0 chr2 209203379 209203403 -41484451 + AT_rich Low_complexity Low_complexity 1 24 0 625 333 103 31 chr2 209203439 209204089 -41483765 + L1MC4 LINE L1 5226 5779 -383 2208 99 0 3 chr2 209204727 209205021 -41482833 + AluSq SINE Alu 1 293 -20 297 0 0 0 chr2 209205027 209205060 -41482794 + (TG)n Simple_repeat Simple_repeat 2 34 0 251 246 0 62 chr2 209205479 209205544 -41482310 + L2 LINE L2 3212 3272 0 243 0 0 0 chr2 209206267 209206294 -41481560 + (TG)n Simple_repeat Simple_repeat 1 27 0 314 320 110 0 chr2 209206688 209206888 -41480966 + L2 LINE L2 1921 2142 -1172 333 0 0 0 chr2 209206894 209206931 -41480923 + (CA)n Simple_repeat Simple_repeat 2 38 0 286 231 115 0 chr2 209206974 209207052 -41480802 + HAL1 LINE L1 1928 2014 -493 520 266 30 76 chr2 209207114 209207377 -41480477 + HAL1 LINE L1 2226 2476 -31 2162 111 0 0 chr2 209210666 209210954 -41476900 + AluSg SINE Alu 1 288 -22 240 97 0 97 chr2 209210955 209211017 -41476837 + L1MC4 LINE L1 6648 6703 -1339 309 261 0 22 chr2 209211057 209211149 -41476705 - L1MC4 LINE L1 -1339 6703 6614 * 345 234 0 43 chr2 209211067 209211161 -41476693 + L1MC4 LINE L1 6614 6703 -1339 * 348 236 34 22 chr2 209211117 209211206 -41476648 - L1MC4 LINE L1 -1339 6703 6614 1835 147 0 124 chr2 209211213 209211609 -41476245 - MER7A DNA MER2_type -1 345 1 256 298 198 16 chr2 209211888 209212009 -41475845 - MIR3 SINE MIR -62 146 4 234 0 0 0 chr2 209214669 209214695 -41473159 + (A)n Simple_repeat Simple_repeat 1 26 0 252 0 0 0 chr2 209217084 209217112 -41470742 + (A)n Simple_repeat Simple_repeat 1 28 0 372 59 0 0 chr2 209217502 209217553 -41470301 + (CA)n Simple_repeat Simple_repeat 2 52 0 664 248 56 0 chr2 209217989 209218150 -41469704 + MIR SINE MIR 65 234 -28 403 272 136 0 chr2 209218701 209218804 -41469050 + L2 LINE L2 3197 3313 0 759 277 4 62 chr2 209220801 209221043 -41466811 + MIR SINE MIR 35 262 0 314 271 54 86 chr2 209221320 209221541 -41466313 + MIR SINE MIR 34 247 -15 2322 216 43 4 chr2 209221611 209222096 -41465758 + MLT1E2 LTR MaLR 14 517 -109 1617 144 0 0 chr2 209222099 209222328 -41465526 + AluSx SINE Alu 1 229 -83 201 74 0 0 chr2 209222339 209222366 -41465488 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 384 257 119 0 chr2 209222370 209222479 -41465375 + MLT1E2 LTR MaLR 505 626 0 783 280 35 23 chr2 209222530 209222787 -41465067 - MIR SINE MIR 0 262 3 310 337 119 35 chr2 209222989 209223366 -41464488 - MLT1J2 LTR MaLR -22 428 20 332 337 24 42 chr2 209224200 209224366 -41463488 - MER5A DNA MER1_type 0 189 27 274 290 172 0 chr2 209225435 209225580 -41462274 - L2 LINE L2 -11 3302 3133 383 270 24 24 chr2 209225694 209225820 -41462034 - LTR67 LTR ERVL 0 557 432 279 224 69 0 chr2 209228379 209228437 -41459417 - L2 LINE L2 -1 3312 3251 1241 201 69 14 chr2 209228574 209228937 -41458917 + LTR37A LTR ERV1 39 421 -5 31 76 0 0 chr2 209230620 209230686 -41457168 + AT_rich Low_complexity Low_complexity 1 66 0 224 288 0 15 chr2 209232449 209232515 -41455339 + CT-rich Low_complexity Low_complexity 4 68 0 343 294 0 0 chr2 209232829 209232921 -41454933 - MIR3 SINE MIR -7 201 110 321 82 0 0 chr2 209236609 209236658 -41451196 + (TC)n Simple_repeat Simple_repeat 2 50 0 252 0 0 0 chr2 209236658 209236686 -41451168 + (CA)n Simple_repeat Simple_repeat 1 28 0 183 42 0 0 chr2 209238123 209238147 -41449707 + (CA)n Simple_repeat Simple_repeat 1 24 0 525 240 39 56 chr2 209240367 209240546 -41447308 + MER5B DNA MER1_type 1 176 -2 505 324 67 21 chr2 209240692 209240930 -41446924 + MIR SINE MIR 14 262 0 255 306 0 54 chr2 209242081 209242192 -41445662 - L2 LINE L2 0 3313 3209 450 211 0 58 chr2 209242227 209242331 -41445523 + MLT1B LTR MaLR 1 98 -292 3572 104 21 10 chr2 209242335 209242852 -41445002 + MER1A DNA MER1_type 7 529 0 1341 161 0 144 chr2 209242852 209243212 -41444642 + MLT1B LTR MaLR 83 390 0 318 87 0 0 chr2 209243384 209243430 -41444424 + (TG)n Simple_repeat Simple_repeat 1 46 0 915 144 25 25 chr2 209244661 209244821 -41443033 + AluJb SINE Alu 137 296 -16 807 162 123 0 chr2 209245399 209245553 -41442301 + MLT2C2 LTR ERVL 18 190 -274 485 160 8 118 chr2 209245560 209245644 -41442210 + MLT2D LTR ERVL 302 371 -43 221 57 29 0 chr2 209245644 209245679 -41442175 + (CA)n Simple_repeat Simple_repeat 1 36 0 485 160 8 118 chr2 209245679 209245713 -41442141 + MLT2D LTR ERVL 371 407 -7 185 83 28 0 chr2 209245732 209245768 -41442086 + (TA)n Simple_repeat Simple_repeat 2 38 0 218 244 24 49 chr2 209246495 209246577 -41441277 + L2 LINE L2 3193 3272 0 1948 100 92 0 chr2 209247205 209247476 -41440378 - AluY SINE Alu -15 296 1 244 287 37 37 chr2 209249271 209249407 -41438447 + L1MC4a LINE L1 6770 6905 -903 38 39 0 0 chr2 209249408 209249460 -41438394 + AT_rich Low_complexity Low_complexity 1 52 0 258 292 18 9 chr2 209249641 209249754 -41438100 + (TA)n Simple_repeat Simple_repeat 2 115 0 2129 113 10 0 chr2 209250627 209250918 -41436936 - AluSx SINE Alu -18 294 1 1055 149 6 12 chr2 209251462 209251623 -41436231 + AluSx SINE Alu 1 160 -152 1040 133 0 0 chr2 209251848 209251998 -41435856 + AluSx SINE Alu 156 305 -5 208 333 131 0 chr2 209252148 209252247 -41435607 + MIR SINE MIR 80 191 -71 1356 231 98 30 chr2 209253300 209253729 -41434125 + MLT2B1 LTR ERVL 1 458 -62 294 29 0 0 chr2 209253748 209253783 -41434071 + (TG)n Simple_repeat Simple_repeat 2 36 0 6959 151 27 3 chr2 209253796 209254999 -41432855 - Tigger3b DNA MER2_type 0 1231 1 302 243 54 92 chr2 209255076 209255261 -41432593 + L1MC5 LINE L1 7755 7932 -29 952 178 14 72 chr2 209255361 209255420 -41432434 + AluJb SINE Alu 87 148 -164 2370 76 3 3 chr2 209255420 209255722 -41432132 + AluSp SINE Alu 1 302 -11 952 178 14 72 chr2 209255722 209255870 -41431984 + AluJb SINE Alu 148 282 -30 22 0 0 0 chr2 209256034 209256056 -41431798 + AT_rich Low_complexity Low_complexity 1 22 0 272 378 0 67 chr2 209256348 209256528 -41431326 + MIR3 SINE MIR 14 181 -27 210 229 48 48 chr2 209256516 209256599 -41431255 + L2 LINE L2 3159 3241 -31 * 317 113 0 28 chr2 209257010 209257081 -41430773 - MER96B DNA MER1_type? -233 184 116 234 91 0 0 chr2 209257341 209257374 -41430480 + (T)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr2 209257472 209257494 -41430360 + AT_rich Low_complexity Low_complexity 1 22 0 1780 128 14 28 chr2 209257512 209257800 -41430054 - AluJb SINE Alu -28 284 1 280 229 0 43 chr2 209258026 209258096 -41429758 + L2 LINE L2 3204 3270 -2 330 271 114 14 chr2 209258450 209258590 -41429264 + LTR33 LTR ERVL 1 154 -367 314 301 119 7 chr2 209258806 209258949 -41428905 + MER115 DNA AcHobo 149 307 -386 817 234 16 49 chr2 209259052 209259296 -41428558 + MER115 DNA AcHobo 456 691 -2 288 310 11 0 chr2 209260098 209260185 -41427669 - L2 LINE L2 -48 3224 3137 401 302 75 6 chr2 209260204 209260287 -41427567 - L2 LINE L2 -3 3310 3234 270 0 0 0 chr2 209260287 209260317 -41427537 + (CA)n Simple_repeat Simple_repeat 2 31 0 401 302 75 6 chr2 209260317 209260392 -41427462 - L2 LINE L2 -79 3234 3141 672 296 183 4 chr2 209261175 209261689 -41426165 - L2 LINE L2 -660 2654 2049 690 251 40 51 chr2 209261747 209262022 -41425832 - MER46C DNA MER2_type 0 338 67 557 260 153 10 chr2 209262086 209262282 -41425572 - MIR SINE MIR -34 228 5 216 286 143 34 chr2 209262282 209262429 -41425425 - L2 LINE L2 -366 2948 2786 1842 154 7 7 chr2 209262736 209263028 -41424826 - AluJb SINE Alu -18 294 3 1548 202 10 16 chr2 209263061 209263415 -41424439 + AluJo SINE Alu 3 354 0 989 172 55 27 chr2 209263947 209264203 -41423651 + MER33 DNA MER1_type 6 268 -56 246 171 43 0 chr2 209264214 209264284 -41423570 + GA-rich Low_complexity Low_complexity 2 74 0 2546 59 3 3 chr2 209264689 209264996 -41422858 + AluY SINE Alu 1 307 -4 2247 175 7 14 chr2 209266609 209267026 -41420828 - MLT2D LTR ERVL 0 414 1 356 195 8 34 chr2 209267250 209267368 -41420486 + L1M4 LINE L1 4943 5057 -1089 1053 209 75 7 chr2 209267582 209267874 -41419980 + LTR50 LTR ERVL 482 793 -2 267 265 41 20 chr2 209268004 209268102 -41419752 + L2 LINE L2 2707 2806 -508 1854 164 3 0 chr2 209268522 209268814 -41419040 - AluJo SINE Alu -19 293 1 291 190 0 0 chr2 209268854 209268912 -41418942 + (TA)n Simple_repeat Simple_repeat 2 59 0 315 298 44 91 chr2 209269058 209269164 -41418690 + MLT1I LTR MaLR 59 168 -241 1861 164 3 3 chr2 209269164 209269451 -41418403 - AluJb SINE Alu -13 299 13 315 298 44 91 chr2 209269451 209269683 -41418171 + MLT1I LTR MaLR 168 381 -28 336 352 59 13 chr2 209269698 209269934 -41417920 + HAL1 LINE L1 881 1127 -1380 528 268 166 0 chr2 209269967 209270124 -41417730 - MER5A DNA MER1_type -6 183 1 240 179 149 75 chr2 209270140 209270207 -41417647 + MER5A DNA MER1_type 9 80 -109 673 251 90 0 chr2 209270240 209270407 -41417447 + MER5A DNA MER1_type 8 189 0 522 292 138 39 chr2 209271350 209271855 -41415999 - L2 LINE L2 -56 3257 2688 3706 143 28 36 chr2 209271856 209272576 -41415278 + L1MB3 LINE L1 5451 6164 -19 288 211 0 0 chr2 209272577 209272648 -41415206 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 2297 84 3 7 chr2 209272655 209272954 -41414900 - AluSx SINE Alu -14 298 1 325 298 15 53 chr2 209272995 209273126 -41414728 - L2 LINE L2 -611 2703 2578 252 281 0 0 chr2 209275465 209275522 -41412332 - MER5A DNA MER1_type -94 95 39 924 61 0 0 chr2 209275948 209276080 -41411774 + (GA)n Simple_repeat Simple_repeat 1 132 0 301 238 10 20 chr2 209276512 209276613 -41411241 + L1ME4a LINE L1 5946 6045 -76 647 328 112 45 chr2 209276706 209277431 -41410423 - L2 LINE L2 -231 3041 2272 385 219 0 0 chr2 209277467 209277549 -41410305 + MER94 DNA DNA 11 92 -42 1952 169 16 24 chr2 209277655 209278033 -41409821 + MSTD LTR MaLR 22 396 0 492 299 128 28 chr2 209278034 209278285 -41409569 - L2 LINE L2 -1324 1990 1715 530 296 46 0 chr2 209278372 209278585 -41409269 + L1ME3A LINE L1 5688 5868 -302 231 350 8 17 chr2 209279477 209279597 -41408257 - L3 LINE CR1 -764 813 695 377 298 0 11 chr2 209281550 209281644 -41406210 + L2 LINE L2 3199 3291 -22 283 287 23 23 chr2 209282619 209282706 -41405148 + L2 LINE L2 2715 2801 -513 2311 108 0 6 chr2 209283066 209283380 -41404474 + AluSq SINE Alu 1 312 -1 2204 119 0 13 chr2 209284089 209284400 -41403454 - AluSx SINE Alu -5 307 1 588 195 58 88 chr2 209284431 209284657 -41403197 - MLT1D LTR MaLR -284 221 3 1628 166 58 72 chr2 209284664 209285081 -41402773 - MLT2D LTR ERVL 0 414 4 2127 117 64 10 chr2 209285304 209285708 -41402146 + LTR23 LTR ERV1 1 457 -10 471 267 22 24 chr2 209285737 209285911 -41401943 - MIR SINE MIR -28 234 60 2024 204 45 101 chr2 209285923 209286658 -41401196 + LTR8A LTR ERV1 34 727 0 198 271 100 29 chr2 209286658 209286728 -41401126 - MIR SINE MIR -181 81 7 250 239 0 14 chr2 209286952 209287023 -41400831 + Charlie8 DNA MER1_type 1357 1426 -991 238 357 14 0 chr2 209287039 209287109 -41400745 + L2 LINE L2 3169 3239 -33 221 313 94 31 chr2 209287145 209287273 -41400581 - MIR SINE MIR -126 136 1 1809 179 0 10 chr2 209287419 209287726 -41400128 + AluJb SINE Alu 3 306 -6 2060 142 3 0 chr2 209288366 209288668 -41399186 + AluSx SINE Alu 1 303 -9 2025 158 3 0 chr2 209289004 209289314 -41398540 - AluSx SINE Alu -1 311 1 310 238 87 32 chr2 209289398 209289524 -41398330 + MLT1J LTR MaLR 377 509 -2 1479 117 5 0 chr2 209289566 209289801 -41398053 + AluSc SINE Alu 83 318 0 240 302 17 47 chr2 209290316 209290437 -41397417 - L1MC5 LINE L1 -534 7427 7311 1900 154 0 39 chr2 209290437 209290749 -41397105 - AluJb SINE Alu -12 300 1 240 302 17 47 chr2 209290749 209290799 -41397055 - L1MC5 LINE L1 -650 7311 7261 2157 128 7 0 chr2 209290889 209291187 -41396667 - AluSx SINE Alu -12 300 1 622 265 0 48 chr2 209291202 209291432 -41396422 - L1MC5 LINE L1 -746 7215 6997 1991 143 108 2 chr2 209291847 209292286 -41395568 + MER1A DNA MER1_type 1 527 -2 375 269 60 45 chr2 209292452 209292586 -41395268 + L2 LINE L2 3136 3271 -1 725 194 0 0 chr2 209292847 209292971 -41394883 + FLAM_C SINE Alu 1 124 -19 33 0 0 0 chr2 209292973 209293006 -41394848 + AT_rich Low_complexity Low_complexity 1 33 0 359 151 8 118 chr2 209294155 209294274 -41393580 + Charlie5 DNA MER1_type 2480 2585 -27 1528 140 70 50 chr2 209294353 209294653 -41393201 + MER1B DNA MER1_type 34 339 0 297 244 90 13 chr2 209295274 209295352 -41392502 + MER5B DNA MER1_type 26 109 -69 197 372 41 35 chr2 209296964 209297109 -41390745 - L2 LINE L2 -283 2989 2844 692 266 118 9 chr2 209298032 209298264 -41389590 + MIR SINE MIR 17 258 -4 345 339 177 8 chr2 209298773 209299027 -41388827 + L2 LINE L2 2677 2973 -341 461 325 138 29 chr2 209299160 209299501 -41388353 - L2 LINE L2 -43 3229 2852 21 36 0 0 chr2 209299737 209299765 -41388089 + AT_rich Low_complexity Low_complexity 1 28 0 823 108 0 0 chr2 209299770 209299890 -41387964 - THE1B LTR MaLR -49 315 196 214 233 0 0 chr2 209300439 209300482 -41387372 - L2 LINE L2 0 3313 3271 26 0 0 0 chr2 209301616 209301642 -41386212 + AT_rich Low_complexity Low_complexity 1 26 0 1450 227 5 19 chr2 209302541 209302920 -41384934 + L1M4 LINE L1 1335 1708 -4834 759 220 181 10 chr2 209302962 209303280 -41384574 + MER57A LTR ERV1 66 402 -1 898 218 31 23 chr2 209303280 209303541 -41384313 + L1M4 LINE L1 1691 1953 -4693 316 340 76 72 chr2 209304241 209304532 -41383322 + L2 LINE L2 2977 3268 -4 2341 99 0 6 chr2 209304600 209304912 -41382942 - AluSg SINE Alu 0 310 1 1834 142 4 0 chr2 209305118 209305385 -41382469 + AluSx SINE Alu 1 268 -44 212 0 36 0 chr2 209305395 209305423 -41382431 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1665 194 27 32 chr2 209306409 209306781 -41381073 - MLT1A2 LTR MaLR -4 370 1 729 267 99 16 chr2 209306971 209307274 -41380580 - HERV16 LTR ERVL -2726 2270 1943 343 368 50 10 chr2 209307465 209307767 -41380087 - HERV16 LTR ERVL -4645 351 38 289 290 194 0 chr2 209307834 209307958 -41379896 - LTR16B LTR ERVL -199 265 118 720 214 71 2 chr2 209308064 209308298 -41379556 + L1MC4 LINE L1 7805 7995 0 643 321 180 49 chr2 209308553 209308887 -41378967 - L2 LINE L2 -1724 1590 1301 1924 184 84 45 chr2 209308887 209309372 -41378482 - MLT1D LTR MaLR 0 505 2 643 321 180 49 chr2 209309372 209309799 -41378055 - L2 LINE L2 -2013 1301 729 1560 191 26 17 chr2 209310048 209310229 -41377625 + MLT1B LTR MaLR 1 188 -202 291 28 0 0 chr2 209310229 209310265 -41377589 + (CA)n Simple_repeat Simple_repeat 2 37 0 1560 191 26 17 chr2 209310265 209310428 -41377426 + MLT1B LTR MaLR 188 348 -42 237 302 58 0 chr2 209311913 209311999 -41375855 - MER5A DNA MER1_type -43 146 56 215 200 0 83 chr2 209311967 209312027 -41375827 + MER5A DNA MER1_type 113 167 -22 * 318 294 66 29 chr2 209312482 209312618 -41375236 + MIR3 SINE MIR 1 141 -67 250 315 135 0 chr2 209312628 209312717 -41375137 - MER5B DNA MER1_type 0 178 78 2231 127 3 29 chr2 209313435 209313781 -41374073 - MER1B DNA MER1_type 0 337 1 1967 201 30 0 chr2 209314021 209314423 -41373431 - MER63C DNA MER1_type 0 931 518 948 236 10 0 chr2 209314424 209314623 -41373231 - MER58A DNA MER1_type -2 222 22 288 278 37 9 chr2 209314740 209314848 -41373006 - LTR33A LTR ERVL -329 194 84 730 208 106 25 chr2 209314882 209315127 -41372727 - MER63C DNA MER1_type -406 524 260 22 35 0 0 chr2 209315129 209315158 -41372696 + AT_rich Low_complexity Low_complexity 1 29 0 227 277 40 30 chr2 209315326 209315427 -41372427 - MLT1K LTR MaLR 0 588 487 249 255 153 66 chr2 209315596 209315792 -41372062 - MLT1K LTR MaLR -281 307 95 1063 169 0 11 chr2 209316143 209316320 -41371534 + FAM SINE Alu 1 175 0 851 248 172 5 chr2 209316345 209316728 -41371126 - LTR33A LTR ERVL -2 521 75 267 256 51 51 chr2 209317728 209317806 -41370048 - MER5B DNA MER1_type -7 171 94 2454 136 29 2 chr2 209318350 209318761 -41369093 + MSTA LTR MaLR 1 422 -6 21 89 0 0 chr2 209320665 209320721 -41367133 + AT_rich Low_complexity Low_complexity 1 56 0 1125 155 70 5 chr2 209320814 209321014 -41366840 - MER20 DNA MER1_type -4 215 3 29 47 0 0 chr2 209322264 209322307 -41365547 + AT_rich Low_complexity Low_complexity 1 43 0 391 299 24 55 chr2 209322760 209322903 -41364951 + HAL1b LINE L1 362 495 -853 2142 154 0 0 chr2 209322903 209323215 -41364639 - AluSx SINE Alu 0 312 1 391 299 24 55 chr2 209323215 209323325 -41364529 + HAL1b LINE L1 495 607 -741 731 279 135 45 chr2 209323423 209323988 -41363866 - L1 LINE L1 -1823 4323 3810 1453 219 31 6 chr2 209323988 209324344 -41363510 + MLT1A1 LTR MaLR 1 365 0 731 279 135 45 chr2 209324344 209324887 -41362967 - L1 LINE L1 -2336 3810 3115 394 305 90 34 chr2 209325095 209325328 -41362526 + L1MC4a LINE L1 5753 5998 -1810 722 316 98 40 chr2 209325885 209326261 -41361593 + L3b LINE CR1 1129 1526 -57 1744 184 3 7 chr2 209326591 209326884 -41360970 - AluJo SINE Alu -20 292 1 2209 168 16 19 chr2 209327228 209327657 -41360197 - L1MB2 LINE L1 -2 6169 5742 847 233 155 15 chr2 209327705 209328040 -41359814 + LTR50 LTR ERVL 1 382 -413 254 181 56 0 chr2 209328217 209328289 -41359565 + LTR50 LTR ERVL 718 793 -2 267 31 0 0 chr2 209328677 209328709 -41359145 + (TG)n Simple_repeat Simple_repeat 2 33 0 459 257 56 45 chr2 209328925 209329104 -41358750 - MIR SINE MIR 0 262 82 29 0 0 0 chr2 209329174 209329203 -41358651 + AT_rich Low_complexity Low_complexity 1 29 0 1750 165 0 61 chr2 209329206 209329534 -41358320 - AluSx SINE Alu -4 308 1 23 33 0 0 chr2 209329543 209329573 -41358281 + AT_rich Low_complexity Low_complexity 1 30 0 317 294 112 50 chr2 209329710 209329944 -41357910 + L1MC/D LINE L1 5505 5751 -584 2138 132 0 3 chr2 209329977 209330280 -41357574 + AluSx SINE Alu 1 302 -10 1761 181 3 3 chr2 209330527 209330830 -41357024 - AluJb SINE Alu -9 303 1 308 102 0 0 chr2 209331726 209331775 -41356079 - Alu SINE Alu -5 296 248 876 154 15 0 chr2 209331778 209331908 -41355946 - AluSq/x SINE Alu -180 132 1 207 279 139 0 chr2 209332144 209332223 -41355631 + MIR SINE MIR 61 150 -112 375 273 20 0 chr2 209333517 209333616 -41354238 + MER5A DNA MER1_type 67 167 -22 284 158 123 0 chr2 209333646 209333703 -41354151 - MER5A DNA MER1_type -109 80 17 236 316 102 20 chr2 209334138 209334236 -41353618 - MER91C DNA MER1_type -33 107 2 704 282 80 36 chr2 209334798 209335184 -41352670 + LTR33 LTR ERVL 26 428 -93 11021 153 27 39 chr2 209335192 209335249 -41352605 - Ricksha DNA DNA -3 3243 3187 2296 91 3 3 chr2 209335249 209335546 -41352308 - AluY SINE Alu -14 297 1 3515 34 0 0 chr2 209335546 209335964 -41351890 + L1PA4 LINE L1 5738 6155 0 11021 153 27 39 chr2 209335964 209336912 -41350942 - Ricksha DNA DNA -58 3188 2229 2361 100 7 0 chr2 209336912 209337221 -41350633 - AluSq SINE Alu -2 311 1 11021 153 27 39 chr2 209337221 209337470 -41350384 - Ricksha DNA DNA -1017 2229 1978 2096 117 20 0 chr2 209337470 209337770 -41350084 - AluSg SINE Alu -4 306 1 11021 153 27 39 chr2 209337770 209338240 -41349614 - Ricksha DNA DNA -1268 1978 1548 2222 109 30 0 chr2 209338240 209338543 -41349311 - AluSx SINE Alu 0 312 1 11021 153 27 39 chr2 209338543 209339029 -41348825 - Ricksha DNA DNA -1698 1548 1057 3642 137 39 2 chr2 209339032 209339630 -41348224 - Ricksha DNA DNA -2619 627 8 369 333 134 39 chr2 209340048 209340279 -41347575 + HAL1 LINE L1 595 847 -1660 375 288 110 0 chr2 209340279 209340442 -41347412 + Zaphod DNA AcHobo 1 181 -3850 282 173 125 0 chr2 209340541 209340645 -41347209 + Zaphod DNA AcHobo 3597 3713 -318 230 148 19 0 chr2 209340666 209340720 -41347134 + (TTATA)n Simple_repeat Simple_repeat 5 59 0 1030 203 75 51 chr2 209340736 209341031 -41346823 + Zaphod DNA AcHobo 3730 4031 0 445 251 45 97 chr2 209341038 209341305 -41346549 + HAL1 LINE L1 848 1100 -1407 4365 162 30 52 chr2 209341321 209342304 -41345550 + L1MD1 LINE L1 5281 6241 -1 468 282 83 63 chr2 209342304 209342690 -41345164 + HAL1 LINE L1 1623 2000 -507 1803 201 16 11 chr2 209342690 209343053 -41344801 + MLT1A1 LTR MaLR 1 365 0 468 282 83 63 chr2 209343053 209343415 -41344439 + HAL1 LINE L1 2000 2386 -121 255 156 0 89 chr2 209343719 209343809 -41344045 + A-rich Low_complexity Low_complexity 1 82 0 584 304 81 31 chr2 209344147 209344469 -41343385 - MLT1K LTR MaLR -47 541 204 234 0 0 0 chr2 209344804 209344830 -41343024 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 244 250 14 14 chr2 209344920 209344992 -41342862 + MER93b LTR ERV1 1 72 -301 * 808 226 107 19 chr2 209344962 209345318 -41342536 + MER57A LTR ERV1 43 403 0 7595 170 4 13 chr2 209345381 209346872 -41340982 + L1P LINE L1 3421 4898 -1248 299 223 117 48 chr2 209347776 209347879 -41339975 + L2 LINE L2 3200 3309 -4 189 0 0 0 chr2 209348071 209348092 -41339762 + (A)n Simple_repeat Simple_repeat 1 21 0 1641 170 54 14 chr2 209348097 209348391 -41339463 + AluJb SINE Alu 1 306 -6 436 296 100 38 chr2 209348443 209348543 -41339311 - MLT1L LTR MaLR -211 404 312 656 189 47 8 chr2 209348543 209348670 -41339184 - FLAM_A SINE Alu 0 133 2 436 296 100 38 chr2 209348670 209348809 -41339045 - MLT1L LTR MaLR -303 312 150 219 179 51 6 chr2 209349001 209349157 -41338697 + (TA)n Simple_repeat Simple_repeat 2 164 0 24 0 0 0 chr2 209349325 209349349 -41338505 + AT_rich Low_complexity Low_complexity 1 24 0 323 348 101 10 chr2 209349486 209349782 -41338072 + L2 LINE L2 1932 2254 -1060 401 275 161 71 chr2 209349797 209350156 -41337698 + MLT1J2 LTR MaLR 1 403 -47 1253 168 68 71 chr2 209350156 209350496 -41337358 + MER44D DNA MER2_type 1 609 0 401 275 161 71 chr2 209350496 209350547 -41337307 + MLT1J2 LTR MaLR 403 448 -2 671 348 100 11 chr2 209350758 209351109 -41336745 + L2 LINE L2 2528 2909 -405 39923 61 2 5 chr2 209351243 209357398 -41330456 - L1PA5 LINE L1 -7 6147 11 243 319 52 37 chr2 209357667 209357802 -41330052 - MLT1J2 LTR MaLR -51 399 263 542 199 60 158 chr2 209357906 209357959 -41329895 - MLT2C1 LTR ERVL 0 397 340 2022 109 183 14 chr2 209357959 209358325 -41329529 + MSTA LTR MaLR 1 428 0 9406 145 9 35 chr2 209358327 209359947 -41327907 + MSTA-int LTR MaLR 3 1580 0 2046 124 135 11 chr2 209359950 209360328 -41327526 + MSTA LTR MaLR 4 428 0 542 199 60 158 chr2 209360328 209360633 -41327221 - MLT2C1 LTR ERVL -60 337 80 608 202 35 0 chr2 209360633 209360747 -41327107 + FLAM_C SINE Alu 1 118 -25 203 88 29 0 chr2 209360751 209360785 -41327069 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 390 209 0 11 chr2 209360785 209360876 -41326978 - MLT2C1 LTR ERVL -307 90 1 501 238 33 20 chr2 209360940 209361091 -41326763 - MLT1J1 LTR MaLR -277 169 17 414 272 49 49 chr2 209362323 209362507 -41325347 - MIR SINE MIR -14 248 65 1494 171 21 56 chr2 209362621 209362960 -41324894 - MLT1A1 LTR MaLR -38 327 1 24 53 0 0 chr2 209363292 209363330 -41324524 + AT_rich Low_complexity Low_complexity 1 38 0 243 273 0 0 chr2 209363592 209363647 -41324207 + GA-rich Low_complexity Low_complexity 1 55 0 436 325 32 7 chr2 209363794 209363948 -41323906 - MIR SINE MIR -90 172 15 541 236 211 33 chr2 209364216 209364367 -41323487 - L2 LINE L2 -1 3312 3189 4100 159 11 41 chr2 209364367 209365176 -41322678 - LTR1 LTR ERV1 0 785 1 541 236 211 33 chr2 209365176 209365299 -41322555 - L2 LINE L2 -124 3189 2989 1595 189 44 14 chr2 209366130 209366427 -41321427 + AluJo SINE Alu 1 306 -6 244 293 27 13 chr2 209366955 209367030 -41320824 + L2 LINE L2 3187 3262 -10 616 264 73 51 chr2 209367812 209368127 -41319727 + MLT1L LTR MaLR 54 375 -240 290 274 9 38 chr2 209368186 209368292 -41319562 + MLT1L LTR MaLR 492 594 -21 668 241 45 80 chr2 209368303 209368479 -41319375 + MLT1F LTR MaLR 15 106 -424 884 142 0 0 chr2 209368479 209368606 -41319248 - FLAM_C SINE Alu -5 128 2 668 241 45 80 chr2 209368606 209368764 -41319090 + MLT1F LTR MaLR 106 268 -262 346 187 27 0 chr2 209368769 209368844 -41319010 - MER67D LTR ERV1 -4 510 434 * 725 229 3 34 chr2 209368818 209369104 -41318750 - MER31B LTR ERV1 -76 390 1 737 216 108 0 chr2 209369104 209369335 -41318519 + MLT1F LTR MaLR 283 538 -4 1636 141 53 21 chr2 209369524 209369896 -41317958 - MSTA LTR MaLR 0 375 1 341 356 61 0 chr2 209371775 209371907 -41315947 - L2 LINE L2 0 3272 3133 228 271 0 0 chr2 209372009 209372068 -41315786 + (TG)n Simple_repeat Simple_repeat 2 60 0 263 191 11 45 chr2 209372183 209372272 -41315582 - L1MC5 LINE L1 -44 7917 7832 1012 183 0 0 chr2 209372281 209372467 -41315387 + MLT1B LTR MaLR 1 186 -204 381 169 34 11 chr2 209372530 209372619 -41315235 + MLT1B LTR MaLR 181 271 -119 2327 228 36 98 chr2 209372953 209373918 -41313936 + L1MEc LINE L1 37 941 -5455 1334 256 49 72 chr2 209373950 209374831 -41313023 + L1MEc LINE L1 776 1636 -4760 6302 203 19 31 chr2 209374840 209376477 -41311377 + L1 LINE L1 3541 5157 -989 3755 181 46 120 chr2 209376471 209377691 -41310163 + L1MA9 LINE L1 4991 6299 104 * 2039 107 0 0 chr2 209377691 209377954 -41309900 + AluSg SINE Alu 31 293 -17 3755 181 46 120 chr2 209377954 209378212 -41309642 + L1MA9 LINE L1 6299 5650 -545 676 239 30 0 chr2 209378212 209378379 -41309475 + MER58A DNA MER1_type 49 220 -4 3755 181 46 120 chr2 209378379 209378817 -41309037 + L1MA9 LINE L1 5649 6118 -77 325 329 110 27 chr2 209379351 209379688 -41308166 - LTR16A LTR ERVL 0 450 86 295 312 101 22 chr2 209381207 209381345 -41306509 + MIR SINE MIR 37 185 -77 314 328 22 23 chr2 209381547 209381717 -41306137 + MIR SINE MIR 33 147 -61 1810 179 16 3 chr2 209381822 209382130 -41305724 - AluJo SINE Alu 0 312 1 651 189 85 122 chr2 209384514 209384902 -41302952 + MLT1C LTR MaLR 7 390 0 316 241 155 35 chr2 209385310 209385426 -41302428 + MER5B DNA MER1_type 10 139 -39 207 204 0 0 chr2 209385769 209385813 -41302041 + (TG)n Simple_repeat Simple_repeat 2 45 0 552 282 57 24 chr2 209387147 209387356 -41300498 - MIR SINE MIR -16 246 31 2068 130 0 0 chr2 209389162 209389447 -41298407 - AluSq SINE Alu -28 285 1 631 323 125 22 chr2 209389620 209390113 -41297741 - L2 LINE L2 -5 3308 2713 533 315 88 23 chr2 209390175 209390480 -41297374 - L2 LINE L2 -620 2694 2370 633 92 0 55 chr2 209390585 209390694 -41297160 + AluY SINE Alu 208 310 -1 25 0 0 0 chr2 209391929 209391954 -41295900 + AT_rich Low_complexity Low_complexity 1 25 0 1802 171 36 3 chr2 209392417 209392750 -41295104 + MER2 DNA MER2_type 1 344 0 220 291 18 9 chr2 209392750 209392860 -41294994 + (TA)n Simple_repeat Simple_repeat 1 111 0 308 64 21 0 chr2 209393059 209393106 -41294748 + (TA)n Simple_repeat Simple_repeat 2 49 0 698 217 0 0 chr2 209393582 209393702 -41294152 + FLAM_A SINE Alu 2 121 -12 1087 286 113 31 chr2 209394240 209394726 -41293128 + MLT1G1 LTR MaLR 1 526 -69 218 173 40 133 chr2 209394778 209394826 -41293028 + MIR SINE MIR 109 160 -102 2434 111 24 14 chr2 209394826 209395197 -41292657 - THE1C LTR MaLR 0 375 1 9683 108 37 53 chr2 209395197 209396804 -41291050 - THE1C-int LTR MaLR 0 1580 1 2469 103 22 11 chr2 209396806 209397175 -41290679 - THE1C LTR MaLR -2 373 1 218 173 40 133 chr2 209397175 209397197 -41290657 + MIR SINE MIR 160 176 -86 252 59 0 0 chr2 209397197 209397231 -41290623 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 1612 144 160 71 chr2 209397242 209397610 -41290244 - MER4A LTR ERV1 -3 661 261 508 111 89 0 chr2 209397610 209397700 -41290154 - MER4A LTR ERV1 -566 98 1 1849 153 4 18 chr2 209397700 209397981 -41289873 - AluJo SINE Alu -35 277 1 250 319 33 0 chr2 209397983 209398074 -41289780 + MIR SINE MIR 167 260 -2 1950 134 7 29 chr2 209398548 209398855 -41288999 - AluSx SINE Alu -10 302 3 584 248 77 34 chr2 209398933 209399231 -41288623 - L1ME1 LINE L1 -5 6161 5851 * 3500 241 38 23 chr2 209399226 209400489 -41287365 - L1MDa LINE L1 -2715 3825 2545 948 244 120 4 chr2 209400593 209400867 -41286987 + MER2 DNA MER2_type 39 344 -1 932 279 71 54 chr2 209400867 209401288 -41286566 - L1MDa LINE L1 -4582 2139 1702 1642 170 92 32 chr2 209401288 209401658 -41286196 + MSTD LTR MaLR 1 392 -4 932 279 71 54 chr2 209401658 209401870 -41285984 - L1MDa LINE L1 -5019 1702 1495 4404 169 32 12 chr2 209401876 209402880 -41284974 - L1MB7 LINE L1 -8 6176 5149 618 230 71 87 chr2 209403025 209403334 -41284520 + L1ME4a LINE L1 5519 5822 -299 482 213 11 0 chr2 209403341 209403435 -41284419 - FLAM SINE Alu -10 133 39 334 284 59 93 chr2 209403470 209403759 -41284095 - MER102a DNA MER1_type -18 312 34 408 298 39 22 chr2 209403808 209403986 -41283868 + L1ME4a LINE L1 5835 6015 -106 28 29 0 0 chr2 209406017 209406052 -41281802 + AT_rich Low_complexity Low_complexity 1 35 0 240 35 0 0 chr2 209406392 209406421 -41281433 + (TC)n Simple_repeat Simple_repeat 2 30 0 279 0 0 0 chr2 209406423 209406454 -41281400 + (CA)n Simple_repeat Simple_repeat 1 31 0 384 269 29 10 chr2 209408157 209408261 -41279593 - MIR SINE MIR -80 128 23 283 74 74 0 chr2 209408428 209408482 -41279372 + L1PA8 LINE L1 6112 6169 -3 896 238 45 16 chr2 209408527 209408771 -41279083 - MIR SINE MIR 0 262 12 1590 145 18 14 chr2 209410213 209410496 -41277358 + MER1B DNA MER1_type 1 284 -55 23 0 0 0 chr2 209413355 209413378 -41274476 + AT_rich Low_complexity Low_complexity 1 23 0 1441 140 0 0 chr2 209413515 209413722 -41274132 + AluSg/x SINE Alu 92 298 -14 181 250 0 71 chr2 209413883 209413939 -41273915 - L2 LINE L2 0 3313 3262 915 172 90 4 chr2 209413945 209414189 -41273665 - MER20B DNA MER1_type -4 779 515 2312 101 3 0 chr2 209414486 209414783 -41273071 - AluSp SINE Alu -14 299 2 27 0 0 0 chr2 209415098 209415125 -41272729 + AT_rich Low_complexity Low_complexity 1 27 0 1779 150 158 11 chr2 209415161 209415462 -41272392 + MSTA LTR MaLR 1 369 -59 216 0 0 0 chr2 209415462 209415486 -41272368 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1779 150 158 11 chr2 209415486 209415557 -41272297 + MSTA LTR MaLR 369 428 0 533 277 117 11 chr2 209415567 209415755 -41272099 - MER20B DNA MER1_type -573 210 3 356 252 33 66 chr2 209415759 209415910 -41271944 - L2 LINE L2 -54 3259 3114 183 354 39 39 chr2 209416364 209416494 -41271360 - MIR SINE MIR -127 135 6 909 213 43 9 chr2 209417236 209417447 -41270407 + MIR SINE MIR 45 262 0 428 249 32 15 chr2 209419650 209419839 -41268015 - L1MC4 LINE L1 -92 7716 7564 3662 19 7 0 chr2 209420119 209420545 -41267309 - L1PA2 LINE L1 -1 6154 5726 3401 22 0 0 chr2 209420545 209420948 -41266906 + L1P LINE L1 4870 5272 -874 295 312 11 0 chr2 209422050 209422143 -41265711 + MIR3 SINE MIR 76 169 -39 783 309 97 71 chr2 209422494 209423451 -41264403 - L2 LINE L2 -349 2965 1984 1353 148 14 9 chr2 209423451 209423668 -41264186 + AluJo SINE Alu 86 303 -9 681 300 8 26 chr2 209423670 209423937 -41263917 - L2 LINE L2 -1324 1990 1729 5006 137 42 34 chr2 209423975 209424750 -41263104 - MER4D LTR ERV1 0 903 117 3786 110 86 29 chr2 209424750 209425404 -41262450 + LTR8 LTR ERV1 1 691 0 5006 137 42 34 chr2 209425404 209425523 -41262331 - MER4D LTR ERV1 -786 117 1 21 57 0 0 chr2 209426212 209426247 -41261607 + AT_rich Low_complexity Low_complexity 1 35 0 228 35 0 0 chr2 209426645 209426674 -41261180 + (CA)n Simple_repeat Simple_repeat 1 29 0 1748 173 7 0 chr2 209426752 209427035 -41260819 - AluJb SINE Alu -27 285 1 879 222 5 24 chr2 209428578 209428790 -41259064 + MER3 DNA MER1_type 2 209 0 329 341 39 0 chr2 209428894 209429023 -41258831 + L2 LINE L2 3134 3267 -5 24 32 0 0 chr2 209429316 209429347 -41258507 + AT_rich Low_complexity Low_complexity 1 31 0 414 89 0 0 chr2 209429632 209429688 -41258166 - MLT1B LTR MaLR 0 390 335 1759 130 65 38 chr2 209429691 209429983 -41257871 - MER1B DNA MER1_type -4 335 36 2018 151 3 23 chr2 209429994 209430346 -41257508 - MLT1B LTR MaLR -45 345 1 679 298 75 18 chr2 209430638 209430866 -41256988 + MIR SINE MIR 22 262 0 23 33 0 0 chr2 209430878 209430908 -41256946 + AT_rich Low_complexity Low_complexity 1 30 0 7437 115 19 0 chr2 209431928 209433471 -41254383 + L1MA2 LINE L1 4731 6301 -3 291 327 74 30 chr2 209434032 209434296 -41253558 - L2 LINE L2 -220 3052 2766 355 268 62 10 chr2 209434867 209434964 -41252890 + MER91C DNA MER1_type 39 140 0 194 91 30 0 chr2 209435258 209435291 -41252563 + CT-rich Low_complexity Low_complexity 2 35 0 186 103 0 0 chr2 209436307 209436336 -41251518 + (A)n Simple_repeat Simple_repeat 1 29 0 328 243 10 39 chr2 209437578 209437681 -41250173 - L1MC4 LINE L1 -1339 6703 6604 57 28 0 0 chr2 209437681 209437752 -41250102 + AT_rich Low_complexity Low_complexity 1 71 0 2201 142 26 0 chr2 209437754 209438093 -41249761 + THE1B LTR MaLR 2 349 -15 2600 183 25 73 chr2 209438115 209438783 -41249071 + MER92B LTR ERV1 1 636 0 258 136 0 0 chr2 209438800 209438844 -41249010 + (TA)n Simple_repeat Simple_repeat 2 45 0 377 306 82 27 chr2 209440180 209440327 -41247527 + L2 LINE L2 3118 3272 0 21 57 0 0 chr2 209440338 209440373 -41247481 + AT_rich Low_complexity Low_complexity 1 35 0 211 323 0 0 chr2 209441763 209441828 -41246026 + MIR SINE MIR 185 249 -13 561 256 119 6 chr2 209441864 209442032 -41245822 + MIR SINE MIR 1 187 -75 223 213 213 0 chr2 209442093 209442168 -41245686 - MIR SINE MIR 0 262 172 756 272 130 13 chr2 209442216 209442542 -41245312 + MLT1I LTR MaLR 79 409 0 199 256 311 0 chr2 209442545 209442635 -41245219 - MIR SINE MIR -144 118 1 41 21 0 0 chr2 209443689 209443737 -41244117 + AT_rich Low_complexity Low_complexity 1 48 0 207 286 88 55 chr2 209444107 209444198 -41243656 + L3b LINE CR1 1404 1497 -86 1303 181 55 96 chr2 209444220 209444585 -41243269 + MLT1A1 LTR MaLR 3 352 -13 338 254 209 40 chr2 209446084 209446261 -41241593 - MIR SINE MIR 0 262 56 2563 105 27 14 chr2 209446297 209446667 -41241187 + THE1C LTR MaLR 1 375 0 418 286 68 87 chr2 209446702 209446968 -41240886 + MIR SINE MIR 2 262 0 451 222 56 48 chr2 209447215 209447341 -41240513 + L2 LINE L2 3142 3268 -4 910 288 49 0 chr2 209447413 209447656 -41240198 + MIR SINE MIR 8 262 0 342 0 0 0 chr2 209448017 209448055 -41239799 + (CA)n Simple_repeat Simple_repeat 2 39 0 5633 112 27 7 chr2 209448196 209449621 -41238233 + L1PA15 LINE L1 4709 6158 -7 1858 80 15 0 chr2 209450101 209450365 -41237489 + L1MA2 LINE L1 6037 6304 0 21 36 0 0 chr2 209450365 209450393 -41237461 + AT_rich Low_complexity Low_complexity 1 28 0 447 354 92 48 chr2 209450640 209451230 -41236624 - L3 LINE CR1 -11 1566 951 631 287 11 5 chr2 209451242 209451441 -41236413 + MIR SINE MIR 38 237 -25 411 333 30 0 chr2 209451530 209451662 -41236192 + MIR SINE MIR 46 181 -81 205 186 0 0 chr2 209452257 209452300 -41235554 + A-rich Low_complexity Low_complexity 1 43 0 225 265 0 0 chr2 209452600 209452649 -41235205 + L2 LINE L2 3265 3313 0 235 292 77 0 chr2 209453403 209453468 -41234386 + L2 LINE L2 3142 3211 -61 320 319 74 30 chr2 209455042 209455177 -41232677 - MIR3 SINE MIR -28 180 40 288 346 44 22 chr2 209457494 209457630 -41230224 + L2 LINE L2 3132 3270 -2 244 281 0 16 chr2 209458105 209458169 -41229685 + L2 LINE L2 3205 3267 -5 2210 110 3 3 chr2 209459304 209459613 -41228241 + AluY SINE Alu 1 309 -2 198 0 0 0 chr2 209459687 209459709 -41228145 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 2115 164 15 10 chr2 209460195 209460584 -41227270 - L1MC2 LINE L1 -15 6329 5939 495 313 102 29 chr2 209460748 209461023 -41226831 - L2 LINE L2 -5 3308 3014 613 66 22 11 chr2 209461029 209461120 -41226734 + L1MA6 LINE L1 6049 6140 -160 1034 109 19 0 chr2 209461144 209461300 -41226554 + L1MA6 LINE L1 6116 6274 -26 201 273 30 0 chr2 209461300 209461366 -41226488 - L2 LINE L2 -421 2893 2826 369 264 111 23 chr2 209461684 209461900 -41225954 - L2 LINE L2 -375 2939 2705 711 0 0 0 chr2 209461900 209461979 -41225875 + (TTTTA)n Simple_repeat Simple_repeat 2 80 0 2151 95 0 0 chr2 209461982 209462255 -41225599 - AluSx SINE Alu -27 285 13 318 192 10 96 chr2 209463208 209463312 -41224542 - L1ME4a LINE L1 0 6121 6027 274 241 108 48 chr2 209463541 209463707 -41224147 - L1ME4a LINE L1 -433 5688 5513 23 86 0 0 chr2 209463783 209463841 -41224013 + AT_rich Low_complexity Low_complexity 1 58 0 1071 271 65 3 chr2 209463884 209464175 -41223679 + MLT1J LTR MaLR 1 309 -202 1529 95 23 0 chr2 209465828 209466049 -41221805 - L1MA1 LINE L1 0 6302 6077 259 364 47 8 chr2 209466380 209466509 -41221345 - MIR SINE MIR -48 214 81 1803 176 0 10 chr2 209467021 209467322 -41220532 - AluJb SINE Alu -12 300 3 1155 93 13 0 chr2 209471209 209471359 -41216495 - AluSg/x SINE Alu -18 294 143 301 292 75 19 chr2 209471359 209471493 -41216361 + MIR SINE MIR 54 192 -70 367 133 22 8 chr2 209473351 209473445 -41214409 + L1MB2 LINE L1 6068 6150 -21 23 33 0 0 chr2 209473903 209473933 -41213921 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 209474240 209474262 -41213592 + AT_rich Low_complexity Low_complexity 1 22 0 48 32 0 0 chr2 209474356 209474418 -41213436 + AT_rich Low_complexity Low_complexity 1 62 0 237 120 140 20 chr2 209474669 209474719 -41213135 + L1MB4 LINE L1 6080 6135 -45 327 83 83 14 chr2 209474719 209474791 -41213063 + L1MB4 LINE L1 6096 6172 -8 23 0 0 0 chr2 209475124 209475147 -41212707 + AT_rich Low_complexity Low_complexity 1 23 0 840 312 92 14 chr2 209475775 209476211 -41211643 - L2 LINE L2 -844 2470 2001 21 0 0 0 chr2 209476299 209476320 -41211534 + AT_rich Low_complexity Low_complexity 1 21 0 717 12 0 0 chr2 209476320 209476406 -41211448 - L1PA4 LINE L1 -4 6151 6066 216 241 0 19 chr2 209477729 209477783 -41210071 - L2 LINE L2 -5 3267 3215 883 75 0 0 chr2 209478997 209479117 -41208737 - AluY SINE Alu -2 309 190 226 297 83 41 chr2 209480589 209480734 -41207120 + MIR SINE MIR 68 218 -44 659 303 42 51 chr2 209480833 209481494 -41206360 + L1ME4a LINE L1 3797 4451 -1695 25 31 0 0 chr2 209481522 209481554 -41206300 + AT_rich Low_complexity Low_complexity 1 32 0 485 322 81 19 chr2 209481683 209481944 -41205910 + L1ME4a LINE L1 4888 5164 -982 651 245 31 61 chr2 209482171 209482484 -41205370 + L1ME4a LINE L1 5510 5811 -310 360 0 0 0 chr2 209482525 209482565 -41205289 + (TG)n Simple_repeat Simple_repeat 1 40 0 239 216 181 52 chr2 209482642 209482758 -41205096 + L1ME4a LINE L1 5970 6100 -21 24 0 0 0 chr2 209482961 209482985 -41204869 + AT_rich Low_complexity Low_complexity 1 24 0 1793 162 10 0 chr2 209484164 209484454 -41203400 - AluJo SINE Alu -19 293 1 1887 99 0 46 chr2 209484586 209484910 -41202944 - AluSx SINE Alu 0 324 14 199 286 83 12 chr2 209485905 209485989 -41201865 - MIR SINE MIR -128 134 45 2335 97 3 0 chr2 209486233 209486533 -41201321 + AluSq SINE Alu 1 301 -12 423 311 263 16 chr2 209486596 209487580 -41200274 - L2 LINE L2 -9 3304 2070 234 211 42 56 chr2 209489410 209489481 -41198373 + L2 LINE L2 3189 3258 -55 307 246 0 0 chr2 209489548 209489613 -41198241 + L2 LINE L2 3203 3267 -5 255 280 11 43 chr2 209489663 209489756 -41198098 - MIR SINE MIR -161 101 12 706 218 91 12 chr2 209490618 209490783 -41197071 + MER5A DNA MER1_type 1 178 -11 284 286 74 74 chr2 209490796 209490985 -41196869 - MER5A DNA MER1_type 0 189 1 2140 106 3 3 chr2 209491762 209492046 -41195808 + AluSg SINE Alu 1 284 -26 222 118 0 0 chr2 209494834 209494868 -41192986 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 36 23 0 0 chr2 209495041 209495084 -41192770 + AT_rich Low_complexity Low_complexity 1 43 0 268 337 11 0 chr2 209495243 209495338 -41192516 - MARNA DNA Mariner -56 530 435 29 0 0 0 chr2 209495345 209495374 -41192480 + AT_rich Low_complexity Low_complexity 1 29 0 306 294 64 10 chr2 209495410 209495614 -41192240 - L1ME4a LINE L1 -52 6069 5855 461 175 62 0 chr2 209496020 209496117 -41191737 - L1ME3A LINE L1 -4 6166 6064 301 318 202 0 chr2 209496140 209496269 -41191585 + MIR SINE MIR 64 218 -44 613 264 44 22 chr2 209497005 209497187 -41190667 - MIR SINE MIR -29 233 48 318 50 0 0 chr2 209498268 209498308 -41189546 + (TC)n Simple_repeat Simple_repeat 1 40 0 324 0 0 0 chr2 209498330 209498366 -41189488 + (GA)n Simple_repeat Simple_repeat 2 37 0 1299 262 31 35 chr2 209499203 209499657 -41188197 - L1 LINE L1 -3379 2767 2316 1162 237 67 11 chr2 209500006 209500439 -41187415 - LTR33A LTR ERVL 0 523 7 2241 77 6 29 chr2 209501310 209501449 -41186405 + AluSc SINE Alu 1 142 -167 2385 66 0 7 chr2 209501449 209501762 -41186092 + AluSp SINE Alu 1 311 0 2241 77 6 29 chr2 209501762 209501932 -41185922 + AluSc SINE Alu 142 304 -5 528 205 0 0 chr2 209502285 209502397 -41185457 + L1MD3 LINE L1 7879 7990 -5 1041 186 39 19 chr2 209504758 209504850 -41183004 + MLT1A1 LTR MaLR 4 93 -272 2226 134 64 52 chr2 209504850 209505269 -41182585 + MSTB LTR MaLR 3 426 0 1041 186 39 19 chr2 209505269 209505487 -41182367 + MLT1A1 LTR MaLR 93 356 -9 1976 146 0 0 chr2 209506181 209506468 -41181386 + AluSc SINE Alu 1 287 -22 330 26 0 0 chr2 209506468 209506507 -41181347 + (CA)n Simple_repeat Simple_repeat 2 40 0 1910 167 0 3 chr2 209506799 209507104 -41180750 - AluJb SINE Alu -5 307 4 604 74 49 0 chr2 209507207 209507288 -41180566 - L1P LINE L1 -6061 85 1 1125 233 5 0 chr2 209507402 209507608 -41180246 - MER58A DNA MER1_type -15 209 3 21 0 0 0 chr2 209508059 209508080 -41179774 + AT_rich Low_complexity Low_complexity 1 21 0 364 209 54 31 chr2 209508881 209509010 -41178844 + L1ME4a LINE L1 5989 6120 -1 21 0 0 0 chr2 209509944 209509965 -41177889 + AT_rich Low_complexity Low_complexity 1 21 0 272 317 129 20 chr2 209511087 209511289 -41176565 + L2 LINE L2 2262 2485 -829 297 268 127 44 chr2 209511535 209511864 -41175990 - MLT1L LTR MaLR -77 538 133 264 331 74 41 chr2 209512261 209512382 -41175472 + L2 LINE L2 3143 3267 -5 195 42 0 0 chr2 209514980 209515004 -41172850 + (T)n Simple_repeat Simple_repeat 1 24 0 567 211 41 14 chr2 209516380 209516527 -41171327 + MER103 DNA DNA 9 159 -7 2038 209 58 82 chr2 209517715 209517800 -41170054 - L1MC4a LINE L1 -663 7145 7060 2198 95 3 10 chr2 209517800 209518096 -41169758 - AluSx SINE Alu -18 294 1 2038 209 58 82 chr2 209518096 209518734 -41169120 - L1MC4a LINE L1 -748 7060 6439 1998 201 142 30 chr2 209518717 209519294 -41168560 + L1MC4 LINE L1 7261 7902 -140 * 1931 30 0 0 chr2 209519296 209519526 -41168328 - L1PA5 LINE L1 -336 5819 5590 2713 45 3 0 chr2 209519526 209519853 -41168001 + L1PA5 LINE L1 5823 6154 0 31 26 0 0 chr2 209519858 209519896 -41167958 + AT_rich Low_complexity Low_complexity 1 38 0 180 0 0 0 chr2 209522169 209522189 -41165665 + (A)n Simple_repeat Simple_repeat 1 20 0 814 199 7 0 chr2 209522201 209522342 -41165512 + FRAM SINE Alu 7 148 -28 23 0 0 0 chr2 209522456 209522479 -41165375 + AT_rich Low_complexity Low_complexity 1 23 0 1345 206 25 21 chr2 209522479 209522760 -41165094 - AluJo SINE Alu -30 282 1 557 320 28 28 chr2 209523017 209523264 -41164590 + MIR SINE MIR 15 261 -1 1576 170 18 19 chr2 209523686 209524013 -41163841 + L1PA13 LINE L1 5839 6163 0 1757 155 47 24 chr2 209524017 209524313 -41163541 + AluSx SINE Alu 1 303 -9 251 111 0 22 chr2 209524313 209524358 -41163496 + (GAGAA)n Simple_repeat Simple_repeat 1 44 0 881 197 4 70 chr2 209525813 209525876 -41161978 - L1MD3 LINE L1 -10 7985 7919 1766 174 0 34 chr2 209525876 209526198 -41161656 + AluJo SINE Alu 1 311 -1 881 197 4 70 chr2 209526198 209526378 -41161476 - L1MD3 LINE L1 -76 7919 7758 * 5631 143 29 19 chr2 209526377 209527399 -41160455 - L1MA8 LINE L1 -3 6288 5256 226 200 67 17 chr2 209527503 209527563 -41160291 + MIR SINE MIR 92 154 -108 303 260 179 0 chr2 209527700 209527823 -41160031 - MER103 DNA DNA -21 145 1 478 254 169 0 chr2 209528505 209528682 -41159172 + L1MC4a LINE L1 5734 5940 -1868 302 325 40 46 chr2 209528851 209529002 -41158852 + L1MC4a LINE L1 6099 6248 -1560 2034 118 7 0 chr2 209529241 209529528 -41158326 - AluSp SINE Alu -17 296 8 30931 115 10 59 chr2 209529607 209536080 -41151774 - L1PA7 LINE L1 -1 6153 9 590 267 44 6 chr2 209537324 209537550 -41150304 - MIR SINE MIR -28 234 4 216 204 429 31 chr2 209538350 209538448 -41149406 + L2 LINE L2 3136 3272 0 222 105 0 0 chr2 209538786 209538824 -41149030 + (TAGA)n Simple_repeat Simple_repeat 2 39 0 748 271 24 47 chr2 209539476 209539731 -41148123 - MIR SINE MIR -8 254 6 554 268 39 28 chr2 209540727 209540906 -41146948 + L1MB2 LINE L1 413 593 -5710 508 242 59 23 chr2 209540947 209541166 -41146688 + L1MB2 LINE L1 1991 2217 -4167 278 284 54 0 chr2 209541174 209541260 -41146594 + MER93a LTR ERV1 257 375 -27 226 188 21 0 chr2 209541260 209541308 -41146546 + (TA)n Simple_repeat Simple_repeat 1 49 0 12223 206 40 9 chr2 209541310 209541577 -41146277 + L1MB2 LINE L1 2214 2471 -3936 1737 231 78 20 chr2 209541577 209542023 -41145831 + MER70A LTR ERVL 1 472 0 12223 206 40 9 chr2 209542023 209545816 -41142038 + L1MB2 LINE L1 2471 6400 -7 390 198 0 30 chr2 209547566 209547667 -41140187 - MER53 DNA DNA -91 98 1 225 276 324 9 chr2 209548424 209548529 -41139325 + L2 LINE L2 3134 3271 -1 203 248 21 0 chr2 209548854 209548912 -41138942 + GA-rich Low_complexity Low_complexity 3 46 0 2460 218 39 25 chr2 209551586 209551846 -41136008 + L1ME3A LINE L1 5548 5803 -367 3655 109 27 2 chr2 209551846 209552359 -41135495 - MER1A DNA MER1_type -1 526 1 2460 218 39 25 chr2 209552359 209552707 -41135147 + L1ME3A LINE L1 5803 6165 -5 218 140 53 35 chr2 209552890 209552947 -41134907 - MIR SINE MIR -57 205 148 255 408 8 0 chr2 209553309 209553434 -41134420 + MIR3 SINE MIR 65 190 -18 722 168 0 0 chr2 209553622 209553747 -41134107 + L1PA16 LINE L1 6042 6166 0 193 266 38 13 chr2 209554659 209554738 -41133116 - MIR SINE MIR -2 260 180 767 281 143 24 chr2 209554791 209555168 -41132686 + LTR33 LTR ERVL 19 440 -81 392 151 0 12 chr2 209555760 209555846 -41132008 + (CA)n Simple_repeat Simple_repeat 2 86 0 1553 137 56 35 chr2 209557408 209557750 -41130104 - L1MC2 LINE L1 -9 6335 5987 377 236 93 76 chr2 209558496 209558721 -41129133 + L2 LINE L2 3084 3312 -1 1531 261 102 2 chr2 209560120 209560591 -41127263 + LTR33 LTR ERVL 1 518 -3 4126 154 75 21 chr2 209560647 209561458 -41126396 + L1MB3 LINE L1 5287 6141 -42 1812 79 0 0 chr2 209561695 209561923 -41125931 + AluY SINE Alu 84 311 0 192 308 0 39 chr2 209562424 209562476 -41125378 + L2 LINE L2 3245 3294 -19 1730 128 15 0 chr2 209562536 209562810 -41125044 + L1PA10 LINE L1 5886 6163 -5 423 138 0 0 chr2 209563447 209563534 -41124320 + (TTGG)n Simple_repeat Simple_repeat 1 87 0 190 209 23 0 chr2 209563777 209563820 -41124034 + L2 LINE L2 3193 3236 -36 374 235 0 12 chr2 209563896 209563977 -41123877 - L2 LINE L2 0 3313 3234 356 235 49 29 chr2 209564038 209564140 -41123714 - MIR SINE MIR -1 261 158 238 272 141 0 chr2 209564168 209564260 -41123594 - L2 LINE L2 -256 3057 2953 364 93 19 0 chr2 209564289 209564343 -41123511 - MADE1 DNA Mariner -25 55 1 217 256 174 35 chr2 209565094 209565180 -41122674 - MIR3 SINE MIR -26 182 85 33 73 0 0 chr2 209565264 209565332 -41122522 + AT_rich Low_complexity Low_complexity 1 68 0 219 69 0 0 chr2 209565495 209565524 -41122330 + (TA)n Simple_repeat Simple_repeat 2 30 0 1705 187 0 34 chr2 209566439 209566826 -41121028 - AluJo SINE Alu 0 378 3 528 175 10 0 chr2 209569334 209569431 -41118423 + MER2 DNA MER2_type 1 98 -247 349 260 48 55 chr2 209569587 209569733 -41118121 - L1ME4a LINE L1 -21 6100 5956 651 211 56 0 chr2 209571238 209571399 -41116455 - MER113 DNA MER1_type? -29 492 323 606 229 214 55 chr2 209571404 209571881 -41115973 + MLT1F LTR MaLR 1 553 -2 207 0 0 0 chr2 209572850 209572873 -41114981 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 21 0 0 0 chr2 209573363 209573384 -41114470 + AT_rich Low_complexity Low_complexity 1 21 0 30 69 0 0 chr2 209573745 209573803 -41114051 + AT_rich Low_complexity Low_complexity 1 58 0 1019 53 38 0 chr2 209573828 209573959 -41113895 + L1PA3 LINE L1 6020 6155 0 1884 151 100 84 chr2 209574536 209575047 -41112807 - MLT2B1 LTR ERVL 0 520 2 21 0 0 0 chr2 209575082 209575103 -41112751 + AT_rich Low_complexity Low_complexity 1 21 0 1800 110 64 7 chr2 209575279 209575593 -41112261 + THE1B LTR MaLR 1 355 0 774 142 0 0 chr2 209576288 209576438 -41111416 - AluSg/x SINE Alu 0 318 169 189 0 0 0 chr2 209576833 209576854 -41111000 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 4786 102 21 4 chr2 209577084 209577789 -41110065 + L1PB3 LINE L1 5435 6151 -3 842 211 67 122 chr2 209578485 209578846 -41109008 - MER102b DNA MER1_type 0 341 1 335 330 106 21 chr2 209578972 209579184 -41108670 + MIR3 SINE MIR 3 212 -25 1672 184 14 0 chr2 209579379 209579662 -41108192 + AluJo SINE Alu 1 287 -25 21 36 0 0 chr2 209579662 209579690 -41108164 + AT_rich Low_complexity Low_complexity 1 28 0 717 220 28 17 chr2 209580161 209580338 -41107516 - MER58A DNA MER1_type 0 224 46 305 18 439 0 chr2 209580343 209580400 -41107454 - L1MA6 LINE L1 -21 6279 6198 226 164 291 0 chr2 209580400 209580455 -41107399 - MER58A DNA MER1_type -35 72 2 382 316 47 57 chr2 209580611 209580823 -41107031 - MIR SINE MIR -38 224 15 498 99 0 0 chr2 209580936 209581007 -41106847 + AluJ/FRAM SINE Alu 232 302 -10 195 261 22 0 chr2 209582280 209582326 -41105528 + L2 LINE L2 3194 3240 -32 2067 143 0 34 chr2 209582415 209582801 -41105053 + AluJo SINE Alu 3 377 0 23 0 0 0 chr2 209582996 209583019 -41104835 + AT_rich Low_complexity Low_complexity 1 23 0 3351 78 26 65 chr2 209583173 209583975 -41103879 + SVA Other Other 307 868 -520 6518 50 6 117 chr2 209583992 209585066 -41102788 + SVA Other Other 433 1386 0 211 161 32 32 chr2 209585498 209585560 -41102294 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 1715 130 121 16 chr2 209585814 209586129 -41101725 + MER7A DNA MER2_type 1 346 0 843 213 6 12 chr2 209586872 209587036 -41100818 - MIR SINE MIR -59 203 41 802 284 55 29 chr2 209587056 209587401 -41100453 - MLT1I LTR MaLR -55 354 1 1604 193 45 11 chr2 209587560 209587939 -41099915 + LTR37A LTR ERV1 13 404 -22 303 28 0 0 chr2 209587959 209587995 -41099859 + (GA)n Simple_repeat Simple_repeat 1 36 0 1704 141 0 64 chr2 209587995 209588292 -41099562 - AluJb SINE Alu -34 278 1 2873 148 34 56 chr2 209588334 209589237 -41098617 - L1MC3 LINE L1 0 7785 6748 3997 142 62 61 chr2 209589251 209590005 -41097849 - L1MC3 LINE L1 -1575 6210 5410 246 227 0 0 chr2 209590005 209590049 -41097805 + 5S rRNA rRNA 2 45 -76 3997 142 62 61 chr2 209590049 209590151 -41097703 - L1MC3 LINE L1 -2375 5410 5310 830 248 16 63 chr2 209590356 209590610 -41097244 - MIR SINE MIR -11 251 10 5171 11 0 0 chr2 209592158 209592772 -41095082 - L1PA2 LINE L1 -169 5986 5373 2117 134 7 3 chr2 209593563 209593870 -41093984 + AluSq SINE Alu 1 308 -5 25 0 0 0 chr2 209594289 209594314 -41093540 + AT_rich Low_complexity Low_complexity 1 25 0 1220 21 0 0 chr2 209595231 209595375 -41092479 - L1PA2 LINE L1 -4 6151 6008 816 125 55 0 chr2 209595475 209595603 -41092251 - AluJb SINE Alu -140 172 38 335 260 103 27 chr2 209596583 209596729 -41091125 - MIR SINE MIR -70 192 36 214 394 32 37 chr2 209597518 209597706 -41090148 - L2 LINE L2 -407 2907 2721 3235 121 66 38 chr2 209598264 209598755 -41089099 + MER6A DNA MER2_type 1 513 -352 2430 54 0 13 chr2 209598755 209599070 -41088784 - AluY SINE Alu 0 311 1 3235 121 66 38 chr2 209599070 209599165 -41088689 + MER6A DNA MER2_type 513 604 -1 273 238 50 0 chr2 209599976 209600056 -41087798 + MLT1L LTR MaLR 422 505 -110 2083 118 14 0 chr2 209600518 209600805 -41087049 + AluSg SINE Alu 1 291 -19 186 43 0 0 chr2 209601420 209601443 -41086411 + (TTG)n Simple_repeat Simple_repeat 1 23 0 1577 137 11 48 chr2 209601456 209601726 -41086128 - AluJo SINE Alu -35 277 18 337 314 209 0 chr2 209601903 209602075 -41085779 + MIR SINE MIR 40 247 -15 2892 13 0 0 chr2 209602090 209602405 -41085449 - AluYb8 SINE Alu -3 315 1 1194 300 70 12 chr2 209602940 209603437 -41084417 + L2 LINE L2 2221 2746 -568 21 71 0 0 chr2 209604032 209604074 -41083780 + AT_rich Low_complexity Low_complexity 1 42 0 248 237 103 37 chr2 209604172 209604344 -41083510 - HAL1b LINE L1 -4 6117 1191 263 339 66 41 chr2 209605164 209605285 -41082569 - L2 LINE L2 -1 3271 3148 1331 148 99 33 chr2 209605285 209605526 -41082328 - MER33 DNA MER1_type -2261 324 57 1749 224 26 13 chr2 209605526 209605915 -41081939 + MSTD LTR MaLR 1 394 -2 1331 148 99 33 chr2 209605915 209605977 -41081877 - MER33 DNA MER1_type -2528 57 1 987 270 107 13 chr2 209605983 209606357 -41081497 - MLT1I LTR MaLR 0 409 1 1880 161 60 6 chr2 209606748 209607065 -41080789 - MER1B DNA MER1_type 0 337 4 1666 117 0 0 chr2 209608565 209608787 -41079067 + AluSg/x SINE Alu 81 302 -10 1046 56 0 0 chr2 209609010 209609136 -41078718 + AluY SINE Alu 179 304 -7 5653 135 46 2 chr2 209609144 209610075 -41077779 + L1MA3 LINE L1 13 984 -6581 * 11604 157 32 11 chr2 209610073 209611628 -41076226 + L1MA3 LINE L1 4210 5730 -1994 180 0 0 0 chr2 209611628 209611648 -41076206 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 11604 157 32 11 chr2 209611648 209613530 -41074324 + L1MA3 LINE L1 5730 7724 0 264 30 0 0 chr2 209614710 209614743 -41073111 + (TC)n Simple_repeat Simple_repeat 1 33 0 350 235 119 126 chr2 209616044 209616321 -41071533 - MER102a DNA MER1_type 0 330 56 1368 186 26 55 chr2 209616522 209616866 -41070988 + MLT2D LTR ERVL 81 414 0 181 243 0 0 chr2 209616866 209616903 -41070951 - MIR SINE MIR -103 105 69 250 294 76 33 chr2 209616954 209617046 -41070808 + MER5A DNA MER1_type 94 189 0 535 279 142 21 chr2 209617060 209617293 -41070561 + MIR SINE MIR 2 262 0 1544 94 36 5 chr2 209617497 209617720 -41070134 - MER30 DNA MER1_type 0 230 1 4067 67 2 0 chr2 209618961 209619577 -41068277 + L1PA8A LINE L1 5165 5781 -350 3786 57 2 0 chr2 209619587 209620062 -41067792 + L1PA8 LINE L1 5691 6166 -6 2519 72 30 33 chr2 209620096 209620459 -41067395 + L1PA8A LINE L1 5769 6130 -1 243 370 132 37 chr2 209620543 209620786 -41067068 - L2 LINE L2 -496 2818 2553 330 274 156 38 chr2 209622752 209622938 -41064916 + MIR SINE MIR 55 262 0 2042 131 36 30 chr2 209622956 209623291 -41064563 - THE1B LTR MaLR -1 363 27 32 26 0 0 chr2 209625229 209625268 -41062586 + AT_rich Low_complexity Low_complexity 1 39 0 254 173 77 0 chr2 209627279 209627331 -41060523 - L2 LINE L2 0 3272 3217 881 302 86 37 chr2 209627606 209628069 -41059785 + L2 LINE L2 2322 2807 -507 386 236 66 38 chr2 209628076 209628182 -41059672 + MER5B DNA MER1_type 7 115 -63 604 257 113 115 chr2 209628260 209628485 -41059369 + L2 LINE L2 2827 3051 -262 856 174 105 12 chr2 209628485 209628657 -41059197 + MER5A DNA MER1_type 1 188 -1 604 257 113 115 chr2 209628657 209628918 -41058936 + L2 LINE L2 3051 3312 -1 28 48 0 0 chr2 209629414 209629456 -41058398 + AT_rich Low_complexity Low_complexity 1 42 0 183 328 0 16 chr2 209629892 209629956 -41057898 + L2 LINE L2 3243 3305 -8 22 80 0 0 chr2 209630037 209630087 -41057767 + AT_rich Low_complexity Low_complexity 1 50 0 756 247 43 16 chr2 209630148 209630403 -41057451 - MIR SINE MIR 0 262 1 962 208 29 14 chr2 209631250 209631457 -41056397 - MER63A DNA MER1_type 0 210 1 352 344 114 13 chr2 209631471 209631698 -41056156 + HAL1 LINE L1 420 669 -1838 856 216 180 78 chr2 209631828 209632512 -41055342 + HAL1 LINE L1 1641 2394 -113 32 67 0 0 chr2 209632635 209632695 -41055159 + AT_rich Low_complexity Low_complexity 1 60 0 1412 194 37 3 chr2 209632726 209633020 -41054834 - AluJo SINE Alu -8 304 1 227 146 104 0 chr2 209633829 209633877 -41053977 + HAL1 LINE L1 2342 2394 -113 298 296 86 20 chr2 209633936 209634088 -41053766 - MER5B DNA MER1_type -16 162 1 1624 191 28 0 chr2 209634361 209634649 -41053205 + AluJb SINE Alu 1 296 -16 464 226 55 94 chr2 209635899 209636080 -41051774 + MER5B DNA MER1_type 1 174 -4 279 198 0 123 chr2 209636090 209636171 -41051683 - MER5B DNA MER1_type 0 178 108 189 0 0 0 chr2 209636206 209636227 -41051627 + (A)n Simple_repeat Simple_repeat 1 21 0 1758 157 62 12 chr2 209636230 209636567 -41051287 + MLT1B LTR MaLR 37 390 0 438 165 64 37 chr2 209636567 209636676 -41051178 - MER5B DNA MER1_type -66 112 1 276 294 24 12 chr2 209637183 209637268 -41050586 + MIR SINE MIR 37 122 -86 466 316 139 25 chr2 209637589 209637906 -41049948 - L2 LINE L2 -665 2649 2297 5224 159 24 30 chr2 209638398 209640167 -41047687 + L1MA9 LINE L1 4380 6131 -181 5632 108 43 11 chr2 209640168 209641137 -41046717 - L1PA15 LINE L1 -4 6161 5163 757 122 54 7 chr2 209641144 209641291 -41046563 + L1MA7 LINE L1 6134 6287 -4 198 167 0 0 chr2 209692732 209692768 -40995086 + A-rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr2 209693241 209693274 -40994580 + AT_rich Low_complexity Low_complexity 1 33 0 639 320 99 4 chr2 209693497 209693769 -40994085 + L3 LINE CR1 1192 1489 -88 297 345 51 5 chr2 209693873 209694070 -40993784 + L2 LINE L2 2331 2536 -778 716 208 38 66 chr2 209694119 209694302 -40993552 + MER5B DNA MER1_type 1 178 0 1697 139 12 0 chr2 209694591 209694849 -40993005 + AluSx SINE Alu 50 310 -2 1540 93 0 0 chr2 209694851 209695055 -40992799 - L1PA8 LINE L1 -1966 4180 3977 8228 79 20 32 chr2 209695062 209697062 -40990792 + L1PA8 LINE L1 4199 6166 -6 2407 83 0 3 chr2 209698044 209698344 -40989510 + AluSx SINE Alu 1 299 -13 2481 48 0 60 chr2 209698344 209698675 -40989179 + AluY SINE Alu 1 311 0 220 321 179 0 chr2 209698683 209698795 -40989059 + MIR3 SINE MIR 28 159 -49 730 250 47 21 chr2 209698801 209698993 -40988861 + MER58A DNA MER1_type 24 220 -4 218 283 193 21 chr2 209700243 209700388 -40987466 + MIR3 SINE MIR 14 183 -25 21 0 0 0 chr2 209700767 209700788 -40987066 + AT_rich Low_complexity Low_complexity 1 21 0 976 238 179 43 chr2 209701899 209702212 -40985642 - L2 LINE L2 0 3313 2939 2772 16 0 0 chr2 209702212 209702518 -40985336 + AluY SINE Alu 1 306 -5 976 238 179 43 chr2 209702518 209702578 -40985276 - L2 LINE L2 -374 2939 2889 522 239 102 36 chr2 209702935 209703102 -40984752 + L2 LINE L2 3120 3297 -16 448 333 104 5 chr2 209703212 209703404 -40984450 - MIR SINE MIR -19 243 33 21 0 0 0 chr2 209703438 209703459 -40984395 + AT_rich Low_complexity Low_complexity 1 21 0 514 302 26 31 chr2 209704575 209704767 -40983087 - MIR SINE MIR -70 192 2 1216 54 0 12 chr2 209704884 209705051 -40982803 + (GAA)n Simple_repeat Simple_repeat 2 166 0 466 237 86 32 chr2 209705604 209705790 -40982064 + L1MC5 LINE L1 7700 7895 -66 21 82 0 0 chr2 209706714 209706763 -40981091 + AT_rich Low_complexity Low_complexity 1 49 0 234 290 0 0 chr2 209708018 209708080 -40979774 + MLT1L LTR MaLR 218 279 -336 281 176 102 134 chr2 209708155 209708371 -40979483 + MLT1J LTR MaLR 280 488 -23 322 253 47 57 chr2 209708470 209708645 -40979209 + MIR SINE MIR 26 191 -66 2219 90 27 7 chr2 209709135 209709434 -40978420 - AluSg SINE Alu -3 307 3 486 271 159 0 chr2 209710224 209710375 -40977479 + MER5A DNA MER1_type 15 189 0 252 225 67 79 chr2 209710714 209710803 -40977051 + MER5A DNA MER1_type 74 161 -28 243 188 62 0 chr2 209711013 209711061 -40976793 + L2 LINE L2 3241 3291 -22 344 265 59 53 chr2 209711069 209711239 -40976615 + L1ME4a LINE L1 5698 5868 -253 248 330 0 0 chr2 209711229 209711326 -40976528 - L1MC4 LINE L1 -1332 6710 6614 * 266 205 84 0 chr2 209711326 209711409 -40976445 + L1MC4 LINE L1 6614 6703 -1339 257 292 0 0 chr2 209711376 209711465 -40976389 - L1MC4 LINE L1 -1340 6702 6614 * 491 174 91 0 chr2 209711511 209711632 -40976222 + L1ME4a LINE L1 5974 6105 -16 22 0 0 0 chr2 209712311 209712333 -40975521 + AT_rich Low_complexity Low_complexity 1 22 0 316 300 77 35 chr2 209712904 209713074 -40974780 + MIR3 SINE MIR 32 208 0 531 321 101 0 chr2 209713481 209713718 -40974136 - MIR SINE MIR 0 262 2 316 281 12 116 chr2 209713853 209714017 -40973837 + L1MC/D LINE L1 5258 5404 -2404 1696 146 75 0 chr2 209714040 209714320 -40973534 - AluJb SINE Alu -11 301 1 966 149 94 0 chr2 209714365 209714546 -40973308 + L1PB4 LINE L1 5952 6149 -7 410 307 48 39 chr2 209714603 209714912 -40972942 + L1MC/D LINE L1 5511 5822 -1986 2012 140 7 7 chr2 209715707 209716015 -40971839 - AluSx SINE Alu 0 312 5 226 331 15 54 chr2 209716224 209716354 -40971500 - L1MC4 LINE L1 -2210 5598 5474 1092 313 76 32 chr2 209716445 209716515 -40971339 - L2 LINE L2 -246 3067 3002 1714 203 96 17 chr2 209716515 209716992 -40970862 + MLT2B2 LTR ERVL 1 515 0 1092 313 76 32 chr2 209716992 209717518 -40970336 - L2 LINE L2 -311 3002 2436 954 261 96 50 chr2 209717587 209718046 -40969808 + MLT1J LTR MaLR 2 481 -30 436 250 95 17 chr2 209718089 209718228 -40969626 - MIR SINE MIR -61 147 5 1182 262 111 15 chr2 209718929 209719333 -40968521 - L1ME3A LINE L1 -1 6169 5727 25 31 0 0 chr2 209720037 209720069 -40967785 + AT_rich Low_complexity Low_complexity 1 32 0 556 224 44 34 chr2 209720202 209720407 -40967447 + L1MC5 LINE L1 7719 7925 -36 267 306 119 0 chr2 209720480 209720614 -40967240 - MIR3 SINE MIR -13 195 46 351 313 61 0 chr2 209720993 209721092 -40966762 - L2 LINE L2 -25 3247 3143 806 217 138 53 chr2 209723001 209723305 -40964549 - MER102b DNA MER1_type -9 332 3 201 74 0 0 chr2 209723496 209723523 -40964331 + (CA)n Simple_repeat Simple_repeat 2 28 0 487 250 32 65 chr2 209726559 209726775 -40961079 - L1ME3A LINE L1 -2 6168 5960 858 224 68 38 chr2 209726810 209726862 -40960992 - L1ME3A LINE L1 -214 5956 5907 2165 131 0 0 chr2 209726862 209727153 -40960701 - AluSx SINE Alu -21 291 1 858 224 68 38 chr2 209727153 209727337 -40960517 - L1ME3A LINE L1 -263 5907 5713 305 208 85 0 chr2 209727723 209727829 -40960025 + L1ME4a LINE L1 5992 6106 -15 496 253 60 12 chr2 209729131 209729297 -40958557 + MIR SINE MIR 88 261 -1 22 35 0 0 chr2 209729385 209729414 -40958440 + AT_rich Low_complexity Low_complexity 1 29 0 476 272 103 52 chr2 209729438 209729670 -40958184 - MIR SINE MIR -17 245 2 1217 181 18 13 chr2 209730455 209730681 -40957173 + MLT1C LTR MaLR 237 463 -4 330 260 58 10 chr2 209731627 209731731 -40956123 - MER5A DNA MER1_type 0 189 81 317 312 51 22 chr2 209732924 209733062 -40954792 + MIR SINE MIR 28 169 -93 1519 179 3 52 chr2 209733341 209733648 -40954206 + AluJo SINE Alu 1 292 -20 812 258 173 17 chr2 209735346 209735641 -40952213 - LTR16C LTR ERVL -79 412 72 656 57 14 50 chr2 209735947 209736088 -40951766 + (TA)n Simple_repeat Simple_repeat 1 136 0 331 284 55 16 chr2 209736138 209736321 -40951533 - AluJo SINE Alu -7 295 106 634 273 46 5 chr2 209736924 209737118 -40950736 - MIR SINE MIR -20 242 41 2035 122 16 13 chr2 209738254 209738557 -40949297 + AluSx SINE Alu 1 304 -8 3609 97 33 9 chr2 209738956 209739503 -40948351 - Tigger4(Zombi) DNA MER2_type 0 2731 2172 988 135 70 0 chr2 209739509 209739665 -40948189 - Tigger4(Zombi) DNA MER2_type -2564 167 1 268 164 131 0 chr2 209739623 209739684 -40948170 + MER46A DNA MER2_type 97 165 -71 * 1785 113 0 0 chr2 209740041 209740271 -40947583 - AluSx SINE Alu -81 231 2 747 122 0 0 chr2 209740271 209740369 -40947485 + MER30 DNA MER1_type 127 224 -6 320 314 16 16 chr2 209741068 209741189 -40946665 + MIR SINE MIR 21 141 -67 1823 121 0 12 chr2 209741440 209741697 -40946157 + AluSx SINE Alu 59 312 0 428 339 73 0 chr2 209741698 209741863 -40945991 + MIR3 SINE MIR 19 195 -13 610 256 143 9 chr2 209741958 209742181 -40945673 - MIR SINE MIR -1 261 9 21 36 0 0 chr2 209743703 209743731 -40944123 + AT_rich Low_complexity Low_complexity 1 28 0 1784 158 14 0 chr2 209744364 209744643 -40943211 + AluSx SINE Alu 1 283 -29 308 240 21 31 chr2 209744830 209744926 -40942928 + MIR SINE MIR 46 140 -68 292 186 17 0 chr2 209745111 209745170 -40942684 + MER5A DNA MER1_type 116 175 -14 339 299 19 9 chr2 209747044 209747151 -40940703 + MIR SINE MIR 44 151 -57 200 356 58 0 chr2 209747339 209747426 -40940428 - MIR3 SINE MIR -114 94 3 2383 90 0 7 chr2 209748318 209748618 -40939236 + AluSq SINE Alu 1 298 -15 308 178 0 78 chr2 209748967 209749057 -40938797 - L1MC5 LINE L1 -107 7854 7772 180 0 0 0 chr2 209749315 209749335 -40938519 + (T)n Simple_repeat Simple_repeat 1 20 0 267 214 0 14 chr2 209749497 209749567 -40938287 + MIR SINE MIR 184 252 -10 23 0 0 0 chr2 209749587 209749610 -40938244 + AT_rich Low_complexity Low_complexity 1 23 0 965 237 10 5 chr2 209750141 209750348 -40937506 + MER63A DNA MER1_type 1 208 -2 215 328 16 0 chr2 209750554 209750618 -40937236 + MIR SINE MIR 48 112 -150 216 311 92 17 chr2 209750631 209750750 -40937104 - L2 LINE L2 -2 3270 3143 209 259 155 26 chr2 209750786 209750902 -40936952 + MIR SINE MIR 122 252 -10 444 267 58 8 chr2 209751139 209751259 -40936595 + MIR SINE MIR 18 143 -65 229 301 24 12 chr2 209753135 209753218 -40934636 - MIR SINE MIR -105 103 20 719 102 76 0 chr2 209753492 209753610 -40934244 + L1PA13 LINE L1 6026 6152 -11 35 54 0 0 chr2 209754021 209754077 -40933777 + AT_rich Low_complexity Low_complexity 1 56 0 1355 95 0 0 chr2 209754177 209754346 -40933508 - AluSx SINE Alu -143 169 1 1488 195 71 40 chr2 209754469 209754920 -40932934 - MLT1C LTR MaLR -2 465 1 215 323 21 0 chr2 209756496 209756589 -40931265 + CT-rich Low_complexity Low_complexity 4 98 0 275 251 60 48 chr2 209756866 209757033 -40930821 - L2 LINE L2 -251 3021 2853 2080 134 29 13 chr2 209757391 209757697 -40930157 + AluJb SINE Alu 1 311 -1 244 246 0 14 chr2 209758602 209758671 -40929183 - MER5C DNA MER1_type 0 324 257 442 214 68 8 chr2 209758807 209758924 -40928930 - MER5C DNA MER1_type -200 124 1 251 185 37 0 chr2 209760223 209760277 -40927577 + GA-rich Low_complexity Low_complexity 4 59 0 2135 116 31 0 chr2 209760828 209761121 -40926733 + AluSx SINE Alu 1 302 -10 346 279 88 34 chr2 209761565 209761712 -40926142 - MIR SINE MIR -42 220 66 * 378 200 12 0 chr2 209761710 209761790 -40926064 - MIR SINE MIR -132 130 50 372 209 0 23 chr2 209762870 209762956 -40924898 + MIR SINE MIR 63 146 -62 2352 93 0 0 chr2 209762967 209763256 -40924598 - AluSx SINE Alu -23 289 1 245 247 11 43 chr2 209763805 209763898 -40923956 - L2 LINE L2 -1 3312 3223 723 294 96 7 chr2 209763995 209764492 -40923362 + L2 LINE L2 2510 3052 -220 784 184 188 14 chr2 209764704 209764911 -40922943 + MIR SINE MIR 6 248 -14 237 192 77 0 chr2 209765778 209765830 -40922024 - MSTC LTR MaLR -371 57 2 21 0 0 0 chr2 209765849 209765870 -40921984 + AT_rich Low_complexity Low_complexity 1 21 0 445 238 32 95 chr2 209767658 209767847 -40920007 - MER104 DNA MER2_type 0 180 4 247 225 42 14 chr2 209767915 209767986 -40919868 - L2 LINE L2 -218 3054 2982 1900 143 14 4 chr2 209768375 209768654 -40919200 - AluJb SINE Alu -30 282 1 1889 158 27 0 chr2 209769612 209769904 -40917950 + AluJb SINE Alu 1 300 -12 209 217 0 0 chr2 209769995 209770041 -40917813 + A-rich Low_complexity Low_complexity 1 46 0 307 257 184 0 chr2 209770606 209770715 -40917139 - MER94 DNA DNA -2 132 4 184 219 24 0 chr2 209771340 209771381 -40916473 - L2 LINE L2 -8 3305 3264 380 324 118 55 chr2 209771473 209771949 -40915905 + MLT1K LTR MaLR 81 586 -2 4694 157 32 37 chr2 209772532 209773377 -40914477 - MER21B LTR ERV1 -1 862 22 6182 94 11 1 chr2 209773409 209774498 -40913356 + L1PA13 LINE L1 5047 6144 -19 1153 189 45 107 chr2 209774508 209774862 -40912992 - MER7A DNA MER2_type -16 330 1 187 231 128 51 chr2 209775094 209775172 -40912682 - L2 LINE L2 -1878 1436 1353 1338 277 60 24 chr2 209775210 209775695 -40912159 + MLT1H LTR MaLR 2 547 -2 317 230 69 11 chr2 209775752 209775839 -40912015 - MER69 DNA AcHobo -4 2522 2431 320 318 45 0 chr2 209775888 209775976 -40911878 - MER69 DNA AcHobo -975 251 160 289 304 64 16 chr2 209776072 209776197 -40911657 - MIR SINE MIR -112 150 20 1325 86 0 16 chr2 209777222 209777408 -40910446 - L1PA11 LINE L1 0 6174 5992 22 88 0 0 chr2 209779752 209779809 -40908045 + AT_rich Low_complexity Low_complexity 1 57 0 343 272 68 0 chr2 209780173 209780276 -40907578 - L2 LINE L2 -2 3270 3161 226 230 20 120 chr2 209780296 209780396 -40907458 - MER5A DNA MER1_type -18 171 82 266 330 89 54 chr2 209780534 209780758 -40907096 - L2 LINE L2 -127 3145 2914 324 298 81 0 chr2 209780817 209780926 -40906928 - MIR SINE MIR -52 210 88 3455 140 33 8 chr2 209780926 209781526 -40906328 + L1MB3 LINE L1 5569 6183 0 324 298 81 0 chr2 209781526 209781540 -40906314 - MIR SINE MIR -174 88 77 337 240 72 113 chr2 209783148 209783421 -40904433 - MER34 LTR ERV1 0 610 353 402 321 0 23 chr2 209784155 209784286 -40903568 - MIR3 SINE MIR -20 188 61 606 49 0 0 chr2 209784302 209784384 -40903470 + (TG)n Simple_repeat Simple_repeat 2 83 0 23 0 0 0 chr2 209784810 209784833 -40903021 + AT_rich Low_complexity Low_complexity 1 23 0 927 94 8 8 chr2 209784979 209785107 -40902747 - AluJo SINE Alu -174 138 11 230 294 162 44 chr2 209787723 209787859 -40899995 + L2 LINE L2 3121 3272 0 1451 238 51 11 chr2 209789888 209790262 -40897592 + L1ME3A LINE L1 5777 6165 -5 490 269 51 6 chr2 209791129 209791285 -40896569 - MER117 DNA MER1_type -34 163 1 4145 144 20 49 chr2 209792582 209793371 -40894483 + L1MC2 LINE L1 5571 6336 -8 1876 166 21 24 chr2 209794747 209795084 -40892770 + MER1B DNA MER1_type 2 337 0 1140 193 118 26 chr2 209797382 209797652 -40890202 + AluJo SINE Alu 2 296 -6 2505 7 0 7 chr2 209797904 209798182 -40889672 - AluYa5 SINE Alu 0 311 36 456 301 209 0 chr2 209798605 209798811 -40889043 - MIR SINE MIR -12 250 2 870 179 90 9 chr2 209798862 209799074 -40888780 + L1MB3 LINE L1 5944 6172 -11 9610 98 27 1 chr2 209799079 209801246 -40886608 - L1PA7 LINE L1 -6 6148 3941 1160 134 134 0 chr2 209801247 209801433 -40886421 - AluSg1 SINE Alu -98 211 1 18427 118 9 4 chr2 209801434 209804300 -40883554 - L1PA7 LINE L1 -2213 3933 1055 32 75 0 0 chr2 209804847 209804914 -40882940 + AT_rich Low_complexity Low_complexity 1 67 0 201 321 12 62 chr2 209805003 209805084 -40882770 + MIR SINE MIR 14 90 -172 700 159 198 0 chr2 209805192 209805349 -40882505 + MER53 DNA DNA 1 188 -1 202 190 155 0 chr2 209806943 209807001 -40880853 - MIR SINE MIR 0 262 196 619 381 86 9 chr2 209807053 209807494 -40880360 - L2 LINE L2 -443 2871 2397 209 246 18 18 chr2 209807555 209807612 -40880242 - L2 LINE L2 0 3272 3216 448 280 99 40 chr2 209808501 209808688 -40879166 - MIR SINE MIR -62 200 3 214 405 14 0 chr2 209809542 209809616 -40878238 - L2 LINE L2 -76 3196 3122 1975 141 0 0 chr2 209809645 209809929 -40877925 - AluJo SINE Alu -8 304 21 295 277 0 11 chr2 209810906 209811000 -40876854 - MIR SINE MIR 0 262 170 684 145 94 0 chr2 209811192 209811309 -40876545 + FLAM_C SINE Alu 2 129 -4 276 319 60 54 chr2 209811533 209811699 -40876155 + L3 LINE CR1 964 1130 -447 * 884 183 54 21 chr2 209811695 209811881 -40875973 + MIR SINE MIR 68 259 -3 644 279 125 34 chr2 209811900 209812197 -40875657 + L3 LINE CR1 1231 1554 -23 1024 286 50 38 chr2 209812553 209812973 -40874881 + MLT1J LTR MaLR 37 461 -50 619 115 0 0 chr2 209814033 209814120 -40873734 + MLT1J LTR MaLR 418 504 -1 348 24 0 0 chr2 209814455 209814496 -40873358 + (CA)n Simple_repeat Simple_repeat 2 42 0 256 279 0 51 chr2 209814506 209814585 -40873269 + MIR SINE MIR 114 188 -74 264 231 0 46 chr2 209814768 209814833 -40873021 + MIR3 SINE MIR 136 197 -11 660 227 8 0 chr2 209815714 209815846 -40872008 + FLAM_A SINE Alu 1 133 0 24 0 0 0 chr2 209816483 209816507 -40871347 + AT_rich Low_complexity Low_complexity 1 24 0 665 220 0 8 chr2 209816802 209816934 -40870920 + FLAM_A SINE Alu 2 132 -1 210 143 0 0 chr2 209816988 209817023 -40870831 + (CA)n Simple_repeat Simple_repeat 2 36 0 198 0 0 0 chr2 209817687 209817709 -40870145 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 15303 118 25 15 chr2 209817870 209820264 -40867590 - Tigger1 DNA MER2_type 0 2418 1 860 278 75 4 chr2 209820524 209820765 -40867089 + MIR SINE MIR 5 262 0 23 54 0 0 chr2 209820854 209820891 -40866963 + AT_rich Low_complexity Low_complexity 1 37 0 4654 138 34 5 chr2 209821787 209822554 -40865300 + L1PA16 LINE L1 5357 6145 -21 270 0 0 0 chr2 209824539 209824569 -40863285 + (CA)n Simple_repeat Simple_repeat 2 31 0 261 119 0 0 chr2 209828121 209828163 -40859691 + (CATA)n Simple_repeat Simple_repeat 3 44 0 21 36 0 0 chr2 209829260 209829288 -40858566 + GC_rich Low_complexity Low_complexity 1 28 0 273 57 0 0 chr2 209829438 209829473 -40858381 + (CGG)n Simple_repeat Simple_repeat 3 37 0 22 35 0 0 chr2 209830782 209830811 -40857043 + AT_rich Low_complexity Low_complexity 1 29 0 330 321 170 6 chr2 209830885 209831044 -40856810 - MIR3 SINE MIR -8 200 16 25 31 0 0 chr2 209831725 209831757 -40856097 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr2 209831923 209831944 -40855910 + (CA)n Simple_repeat Simple_repeat 1 21 0 551 261 33 108 chr2 209832392 209832698 -40855156 + L2 LINE L2 3021 3303 -10 463 309 15 22 chr2 209833149 209833285 -40854569 - MIR SINE MIR -108 154 20 216 86 0 0 chr2 209834974 209835009 -40852845 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 852 271 134 7 chr2 209835988 209836294 -40851560 + MLT1I LTR MaLR 63 407 -2 186 133 0 0 chr2 209836685 209836715 -40851139 + (TATATG)n Simple_repeat Simple_repeat 5 34 0 2064 134 24 24 chr2 209836787 209837160 -40850694 + THE1C LTR MaLR 1 373 -2 8933 136 38 29 chr2 209837162 209838728 -40849126 + THE1C-int LTR MaLR 1 1580 0 2237 143 13 21 chr2 209838728 209839106 -40848748 + THE1C LTR MaLR 1 375 0 513 310 53 37 chr2 209839106 209839461 -40848393 - L1MC4a LINE L1 -1907 5901 5541 235 285 83 21 chr2 209839502 209839646 -40848208 - L1P5 LINE L1 -690 5461 5309 246 307 22 66 chr2 209839728 209839956 -40847898 + LTR16B LTR ERVL 25 242 -222 184 363 32 48 chr2 209840860 209840984 -40846870 + L2 LINE L2 2941 3062 -210 929 244 146 12 chr2 209841271 209841833 -40846021 - Charlie7 DNA MER1_type -1887 725 57 1115 122 70 25 chr2 209841942 209842756 -40845098 + L1MA7 LINE L1 5398 6286 -5 183 237 0 34 chr2 209843353 209843412 -40844442 - L2 LINE L2 0 3313 3257 185 296 86 12 chr2 209843967 209844048 -40843806 + L2 LINE L2 3210 3296 -17 241 351 58 44 chr2 209844478 209844683 -40843171 + L2 LINE L2 2567 2774 -540 3876 54 0 14 chr2 209844736 209845232 -40842622 + L1PA6 LINE L1 5660 6148 -6 242 206 32 32 chr2 209845255 209845318 -40842536 + MIR SINE MIR 67 129 -79 204 194 0 0 chr2 209845321 209845357 -40842497 + GA-rich Low_complexity Low_complexity 1 36 0 1350 55 139 0 chr2 209845673 209845875 -40841979 - MER30 DNA MER1_type 0 230 1 217 268 0 18 chr2 209846363 209846419 -40841435 + L3b LINE CR1 1294 1348 -235 396 277 76 33 chr2 209846719 209846903 -40840951 + MIR SINE MIR 70 261 -1 915 107 7 29 chr2 209846992 209847132 -40840722 + AluJb SINE Alu 136 272 -40 2102 84 32 3 chr2 209847159 209847444 -40840410 + AluSx SINE Alu 1 293 -19 317 277 94 90 chr2 209847961 209848330 -40839524 + L1M2 LINE L1 338 1246 -5603 2145 68 18 7 chr2 209849670 209849948 -40837906 + AluSc SINE Alu 1 281 -28 429 20 0 0 chr2 209849948 209849998 -40837856 + (TA)n Simple_repeat Simple_repeat 2 51 0 571 263 134 5 chr2 209850081 209850267 -40837587 - L2 LINE L2 -1 3312 3103 822 167 0 0 chr2 209851079 209851211 -40836643 - FLAM_A SINE Alu 0 133 2 31 0 0 0 chr2 209851429 209851460 -40836394 + AT_rich Low_complexity Low_complexity 1 31 0 2576 205 90 7 chr2 209851645 209852212 -40835642 - MER90 LTR ERV1 0 614 1 23 33 0 0 chr2 209852276 209852306 -40835548 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 209852366 209852392 -40835462 + AT_rich Low_complexity Low_complexity 1 26 0 258 301 24 12 chr2 209852877 209852960 -40834894 - MIR SINE MIR -105 103 20 691 102 76 0 chr2 209853234 209853352 -40834502 + L1PA13 LINE L1 6026 6152 -11 30 59 0 0 chr2 209853768 209853819 -40834035 + AT_rich Low_complexity Low_complexity 1 51 0 243 0 0 0 chr2 209855552 209855579 -40832275 + (TG)n Simple_repeat Simple_repeat 2 28 0 22 0 0 0 chr2 209856811 209856833 -40831021 + AT_rich Low_complexity Low_complexity 1 22 0 30 45 0 0 chr2 209857180 209857224 -40830630 + AT_rich Low_complexity Low_complexity 1 44 0 2862 216 41 6 chr2 209857810 209858441 -40829413 + MER82 DNA MER2_type 1 653 0 22 56 0 0 chr2 209858607 209858643 -40829211 + AT_rich Low_complexity Low_complexity 1 36 0 199 291 105 12 chr2 209859896 209859982 -40827872 - MIR SINE MIR -71 191 98 494 294 19 6 chr2 209860438 209860598 -40827256 + L2 LINE L2 2544 2705 -609 231 354 87 55 chr2 209860638 209861076 -40826778 + L2 LINE L2 2850 3301 -12 604 302 47 0 chr2 209861384 209861553 -40826301 + MER5A DNA MER1_type 13 189 0 10273 47 5 1 chr2 209862878 209864934 -40822920 - L1PA5 LINE L1 -1 6153 4091 5335 61 1 1 chr2 209864934 209865656 -40822198 + L1PA5 LINE L1 3362 4083 -2063 556 253 152 64 chr2 209865812 209866599 -40821255 - L1M4 LINE L1 -1278 5510 4623 915 199 152 5 chr2 209866599 209866790 -40821064 - MER20 DNA MER1_type 0 219 1 556 253 152 64 chr2 209866790 209866957 -40820897 - L1M4 LINE L1 -2165 4623 4472 5119 70 49 4 chr2 209867964 209868682 -40819172 + L1PA14 LINE L1 5408 6157 -4 22 70 0 0 chr2 209868686 209868729 -40819125 + AT_rich Low_complexity Low_complexity 1 43 0 1664 81 40 0 chr2 209868764 209869012 -40818842 - L1MA5A LINE L1 -2 6295 6038 1948 87 0 4 chr2 209869047 209869313 -40818541 - L1PB1 LINE L1 -2 6149 5885 591 94 94 0 chr2 209869314 209869420 -40818434 - L1MA5A LINE L1 -246 6051 5936 4339 117 10 10 chr2 209869890 209870698 -40817156 - L1MA5A LINE L1 -345 5952 5143 5617 202 38 15 chr2 209870709 209870879 -40816975 - L1M4 LINE L1 -2512 4276 4111 2477 55 13 7 chr2 209870879 209871186 -40816668 - AluY SINE Alu -2 309 1 5617 202 38 15 chr2 209871186 209872013 -40815841 - L1M4 LINE L1 -2677 4111 3304 2316 116 0 0 chr2 209872013 209872323 -40815531 - AluSg SINE Alu 0 310 1 5617 202 38 15 chr2 209872323 209873089 -40814765 - L1M4 LINE L1 -3484 3304 2472 1330 199 46 4 chr2 209873108 209873349 -40814505 - AluJo SINE Alu -61 251 1 1521 144 25 35 chr2 209873350 209873635 -40814219 - L1M4 LINE L1 -4309 2480 2199 5657 239 63 16 chr2 209873655 209875359 -40812495 - L1M4 LINE L1 -5314 1475 6 23 33 0 0 chr2 209875567 209875597 -40812257 + AT_rich Low_complexity Low_complexity 1 30 0 795 169 29 7 chr2 209875725 209875861 -40811993 + MER58A DNA MER1_type 4 142 0 3750 168 50 39 chr2 209875867 209876930 -40810924 - L1MB8 LINE L1 -176 6002 4924 295 162 19 133 chr2 209877169 209877274 -40810580 + MIR SINE MIR 120 212 -50 25 31 0 0 chr2 209878346 209878378 -40809476 + AT_rich Low_complexity Low_complexity 1 32 0 200 59 29 0 chr2 209878460 209878494 -40809360 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 6435 86 17 24 chr2 209878494 209879617 -40808237 - L1PA10 LINE L1 -21 6147 5044 2229 108 0 19 chr2 209879617 209879933 -40807921 - AluSg SINE Alu 0 310 1 6435 86 17 24 chr2 209879933 209880069 -40807785 - L1PA10 LINE L1 -1124 5044 4909 * 30625 108 25 55 chr2 209880066 209886417 -40801437 - L1PA7 LINE L1 -4 6150 2 895 124 55 0 chr2 209886414 209886559 -40801295 - L1PA10 LINE L1 -1225 4921 4769 * 22 35 0 0 chr2 209886632 209886661 -40801193 + AT_rich Low_complexity Low_complexity 1 29 0 2409 79 0 0 chr2 209886752 209887056 -40800798 - AluY SINE Alu -7 304 1 4529 135 25 25 chr2 209887099 209887439 -40800415 - L1MA9 LINE L1 -6 6306 5967 2344 94 3 0 chr2 209887439 209887736 -40800118 - AluSc SINE Alu -11 298 1 4529 135 25 25 chr2 209887736 209888202 -40799652 - L1MA9 LINE L1 -344 5968 5500 21 0 0 0 chr2 209888403 209888424 -40799430 + AT_rich Low_complexity Low_complexity 1 21 0 342 329 59 39 chr2 209889129 209889485 -40798369 + L2 LINE L2 1289 1651 -1663 413 304 49 43 chr2 209889489 209889673 -40798181 + MIR SINE MIR 62 246 -16 * 485 325 108 12 chr2 209889654 209889989 -40797865 + L2 LINE L2 1691 2057 -1257 182 340 14 35 chr2 209890076 209890112 -40797742 + L2 LINE L2 2242 2277 -1037 1373 188 28 16 chr2 209890112 209890247 -40797607 + MER33 DNA MER1_type 1 133 -2452 2331 81 10 0 chr2 209890247 209890545 -40797309 + AluY SINE Alu 1 301 -10 1373 188 28 16 chr2 209890545 209890729 -40797125 + MER33 DNA MER1_type 133 324 0 182 340 14 35 chr2 209890729 209890833 -40797021 + L2 LINE L2 2277 2379 -935 216 67 0 0 chr2 209891522 209891552 -40796302 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 7257 30 7 3 chr2 209891552 209892947 -40794907 - L1PA4 LINE L1 -24 6131 4737 4356 27 0 0 chr2 209892942 209893460 -40794394 + L1PA4 LINE L1 4222 4739 -1407 * 1136 150 21 39 chr2 209893462 209893696 -40794158 - L1MB4 LINE L1 -30 6150 5921 654 171 103 0 chr2 209894730 209894847 -40793007 + AluJo SINE Alu 1 129 -173 1000 181 0 47 chr2 209894899 209895092 -40792762 + AluJo SINE Alu 112 295 -17 760 134 22 30 chr2 209895976 209896110 -40791744 + FLAM_C SINE Alu 1 133 0 340 291 53 53 chr2 209897406 209897650 -40790204 + HAL1 LINE L1 1131 1374 -1133 2030 214 45 19 chr2 209897735 209898249 -40789605 - L1MD3 LINE L1 -10 7985 7459 345 199 0 16 chr2 209898259 209898333 -40789521 - MIR SINE MIR -102 106 34 460 257 155 15 chr2 209898362 209898568 -40789286 + HAL1 LINE L1 747 981 -1526 499 196 185 23 chr2 209898665 209898838 -40789016 - L1MD3 LINE L1 -18 7977 7777 1061 239 55 9 chr2 209898880 209899207 -40788647 + HAL1 LINE L1 1131 1472 -1035 42695 35 25 1 chr2 209899390 209905391 -40782463 - L1PA4 LINE L1 -3 6152 2 223 213 27 0 chr2 209907511 209907586 -40780268 + (TA)n Simple_repeat Simple_repeat 2 78 0 1943 170 3 0 chr2 209907707 209908013 -40779841 - AluJo SINE Alu -5 307 1 247 150 33 0 chr2 209909798 209909858 -40777996 + (TA)n Simple_repeat Simple_repeat 1 62 0 2173 113 3 3 chr2 209910191 209910492 -40777362 + AluSc SINE Alu 1 301 -8 234 239 45 0 chr2 209911610 209911677 -40776177 + MER94 DNA DNA 3 72 -62 224 305 73 0 chr2 209912064 209912146 -40775708 - MIR3 SINE MIR -1 207 120 447 278 148 6 chr2 209912389 209912558 -40775296 - MIR SINE MIR -11 251 59 2266 74 3 16 chr2 209915673 209915982 -40771872 - AluY SINE Alu 0 311 7 1681 103 3 113 chr2 209916603 209916923 -40770931 - AluSg1 SINE Alu -9 300 16 2249 71 0 3 chr2 209916936 209917271 -40770583 - AluY SINE Alu 0 334 1 26 50 0 0 chr2 209919224 209919264 -40768590 + AT_rich Low_complexity Low_complexity 1 40 0 2071 125 10 0 chr2 209919315 209919611 -40768243 + AluSg SINE Alu 1 299 -11 23 54 0 0 chr2 209920415 209920452 -40767402 + AT_rich Low_complexity Low_complexity 1 37 0 291 210 37 25 chr2 209920948 209921029 -40766825 + MIR SINE MIR 51 132 -130 912 39 102 8 chr2 209921033 209921160 -40766694 - MER85 DNA T2_type 0 139 1 326 264 157 29 chr2 209921597 209921941 -40765913 - L1M4 LINE L1 -3649 2497 2110 215 92 115 0 chr2 209923424 209923511 -40764343 + (TA)n Simple_repeat Simple_repeat 1 97 0 34 55 0 0 chr2 209923513 209923568 -40764286 + AT_rich Low_complexity Low_complexity 1 55 0 2253 77 16 21 chr2 209924618 209924986 -40762868 + LTR7 LTR ERV1 2 411 -39 402 21 0 0 chr2 209924986 209925033 -40762821 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr2 209926262 209926283 -40761571 + AT_rich Low_complexity Low_complexity 1 21 0 220 207 17 0 chr2 209929059 209929117 -40758737 + (CCCCG)n Simple_repeat Simple_repeat 5 63 0 22 0 0 0 chr2 209929841 209929863 -40757991 + AT_rich Low_complexity Low_complexity 1 22 0 895 169 73 11 chr2 209929928 209930105 -40757749 + MER5A DNA MER1_type 2 189 0 270 275 41 29 chr2 209930227 209930398 -40757456 - L1ME3A LINE L1 -205 5965 5793 2538 153 47 0 chr2 209930569 209931188 -40756666 + L1P4 LINE L1 4840 5481 -684 1932 107 10 14 chr2 209931304 209931594 -40756260 + AluSx SINE Alu 18 306 -6 4841 92 94 3 chr2 209931594 209932341 -40755513 + L1PBa LINE L1 2102 2917 -3945 4616 42 2 2 chr2 209932341 209932886 -40754968 + L1PA5 LINE L1 5590 6143 -11 21 36 0 0 chr2 209932886 209932914 -40754940 + AT_rich Low_complexity Low_complexity 1 28 0 5133 139 30 4 chr2 209933065 209933885 -40753969 - L1PBa LINE L1 -4909 1954 1113 1127 169 5 0 chr2 209933878 209934079 -40753775 - L1PBa LINE L1 -6661 202 1 * 807 129 8 0 chr2 209934086 209934218 -40753636 - L1MB5 LINE L1 -346 5828 5696 804 255 80 20 chr2 209934224 209934526 -40753328 + L1ME LINE L1 5436 5755 -407 453 200 156 0 chr2 209934531 209934666 -40753188 - L2 LINE L2 -1525 1789 1634 2306 120 20 0 chr2 209934797 209935139 -40752715 - L1PA15 LINE L1 -13 6152 5804 3192 225 60 17 chr2 209935251 209936536 -40751318 + L1 LINE L1 2164 3569 -2577 203 304 43 0 chr2 209936545 209936660 -40751194 - L2 LINE L2 -3 3269 3150 6459 64 24 47 chr2 209936746 209938781 -40749073 + SVA Other Other 1 1404 0 409 195 52 0 chr2 209938786 209938863 -40748991 + L1 LINE L1 3574 3654 -2492 935 258 86 83 chr2 209939515 209940208 -40747646 + L1MC/D LINE L1 4335 5025 -1165 7330 61 0 0 chr2 209940208 209941699 -40746155 - L1PA8 LINE L1 0 6172 4687 935 258 86 83 chr2 209941699 209941908 -40745946 + L1MC/D LINE L1 5025 5232 -958 3656 134 43 15 chr2 209941908 209942076 -40745778 + L1MA5A LINE L1 5621 5783 -514 180 0 0 0 chr2 209942076 209942096 -40745758 + (CA)n Simple_repeat Simple_repeat 1 20 0 3656 134 43 15 chr2 209942096 209942583 -40745271 + L1MA5A LINE L1 5783 6294 -3 935 258 86 83 chr2 209942583 209942792 -40745062 + L1MC/D LINE L1 5232 5447 -743 1352 199 7 21 chr2 209942799 209943090 -40744764 - L1MB4 LINE L1 -7 6173 5887 506 16 16 0 chr2 209943093 209943156 -40744698 + (TTTTA)n Simple_repeat Simple_repeat 2 65 0 1892 134 4 7 chr2 209943160 209943437 -40744417 - AluSx SINE Alu -36 276 1 1007 218 92 46 chr2 209943447 209943789 -40744065 - MER39 LTR ERV1 -73 629 214 24 32 0 0 chr2 209943813 209943844 -40744010 + AT_rich Low_complexity Low_complexity 1 31 0 4486 115 8 52 chr2 209943844 209943958 -40743896 - L1PB2 LINE L1 -3 6148 6031 1925 122 24 14 chr2 209943958 209944246 -40743608 - AluSx SINE Alu -19 293 3 4486 115 8 52 chr2 209944246 209944903 -40742951 - L1PB2 LINE L1 -120 6031 5411 3612 187 21 36 chr2 209945008 209945266 -40742588 + L1 LINE L1 3984 4245 -1901 2020 153 0 3 chr2 209945266 209945567 -40742287 + AluSx SINE Alu 12 311 -1 3612 187 21 36 chr2 209945567 209946131 -40741723 + L1 LINE L1 4245 4793 -1353 2166 81 3 21 chr2 209946135 209946419 -40741435 + AluSp SINE Alu 1 279 -34 43144 37 22 2 chr2 209946424 209952455 -40735399 + L1PA2 LINE L1 1 6154 -1 183 80 0 0 chr2 209952523 209952548 -40735306 + (A)n Simple_repeat Simple_repeat 1 25 0 2118 216 23 4 chr2 209952549 209953077 -40734777 + L1 LINE L1 4783 5320 -826 333 118 0 0 chr2 210003125 210003176 -40684678 + (CA)n Simple_repeat Simple_repeat 2 52 0 792 190 107 47 chr2 210003176 210003419 -40684435 + MLT1C LTR MaLR 207 467 0 22 35 0 0 chr2 210003424 210003453 -40684401 + AT_rich Low_complexity Low_complexity 1 29 0 1048 199 29 0 chr2 210003457 210003698 -40684156 - L1MB7 LINE L1 -23 6161 5914 2090 125 13 0 chr2 210003700 210004004 -40683850 + AluSx SINE Alu 2 309 -3 327 205 50 93 chr2 210004005 210004166 -40683688 - MER112 DNA MER1_type -104 156 3 1014 120 7 0 chr2 210004441 210004583 -40683271 + AluSg/x SINE Alu 158 300 -12 1617 186 163 29 chr2 210004605 210005047 -40682807 + MLT1D LTR MaLR 5 505 0 1531 195 3 55 chr2 210005523 210005831 -40682023 - AluJo SINE Alu -20 292 1 2122 116 0 38 chr2 210006044 210006363 -40681491 + AluSx SINE Alu 1 307 -5 2243 139 0 0 chr2 210006545 210006855 -40680999 - AluSx SINE Alu -2 310 1 2057 137 3 0 chr2 210006967 210007259 -40680595 + AluSx SINE Alu 1 293 -19 2184 117 3 7 chr2 210007463 210007761 -40680093 - AluSx SINE Alu -15 297 1 2113 63 77 31 chr2 210008061 210008348 -40679506 - AluSp SINE Alu -13 300 1 518 303 79 6 chr2 210011241 210011419 -40676435 - MIR3 SINE MIR -9 199 9 249 108 0 0 chr2 210011602 210011639 -40676215 + (TTTTC)n Simple_repeat Simple_repeat 2 38 0 2167 115 16 3 chr2 210011649 210011954 -40675900 + AluSq SINE Alu 1 309 -4 2219 86 10 0 chr2 210012509 210012799 -40675055 - AluSp SINE Alu -20 293 1 1244 39 0 6 chr2 210013110 210013266 -40674588 - L1PA4 LINE L1 -3 6152 5998 1912 119 78 85 chr2 210014456 210014665 -40673189 + Tigger2a DNA MER2_type 1 210 -2498 813 137 0 0 chr2 210014665 210014782 -40673072 - FLAM_C SINE Alu -16 117 1 1912 119 78 85 chr2 210014782 210015009 -40672845 + Tigger2a DNA MER2_type 210 434 0 453 129 41 170 chr2 210015009 210015046 -40672808 - MER33 DNA MER1_type -2280 305 265 1655 186 7 17 chr2 210015046 210015337 -40672517 + AluJb SINE Alu 1 288 -24 453 129 41 170 chr2 210015337 210015385 -40672469 - MER33 DNA MER1_type -2320 265 212 2415 86 0 6 chr2 210015385 210015698 -40672156 + AluY SINE Alu 1 311 0 453 129 41 170 chr2 210015698 210015805 -40672049 - MER33 DNA MER1_type -2373 212 137 1653 149 70 0 chr2 210015812 210016140 -40671714 - L1MB7 LINE L1 -20 6164 5814 284 111 0 0 chr2 210016216 210016261 -40671593 - L1MB7 LINE L1 -346 5828 5784 1245 148 10 0 chr2 210016348 210016557 -40671297 - MER2 DNA MER2_type -134 211 1 1657 180 33 17 chr2 210016560 210016922 -40670932 - L1MB7 LINE L1 -404 5780 5413 411 106 148 120 chr2 210016936 210016980 -40670874 - L1MB4 LINE L1 -6 6174 6133 2296 89 0 0 chr2 210016980 210017272 -40670582 - AluY SINE Alu -17 294 3 411 106 148 120 chr2 210017272 210017369 -40670485 - L1MB4 LINE L1 -47 6133 6029 1789 124 4 37 chr2 210017491 210017578 -40670276 + AluSx SINE Alu 32 120 -192 2314 80 0 7 chr2 210017578 210017877 -40669977 - AluY SINE Alu -14 297 1 1789 124 4 37 chr2 210017877 210018062 -40669792 + AluSx SINE Alu 120 295 -17 23625 56 10 2 chr2 210018062 210022059 -40665795 + L1PA6 LINE L1 2117 6148 -6 1104 180 54 21 chr2 210022068 210022307 -40665547 + MER21-int LTR ERV1 3889 4135 -56 1594 141 97 21 chr2 210022309 210022599 -40665255 + AluSx SINE Alu 1 312 0 2282 106 0 3 chr2 210022834 210023137 -40664717 + AluSp SINE Alu 1 302 -11 2340 103 0 0 chr2 210023405 210023706 -40664148 + AluSg SINE Alu 1 301 -9 2182 104 26 13 chr2 210023718 210024025 -40663829 + AluSp SINE Alu 1 311 -2 329 250 125 33 chr2 210024496 210024616 -40663238 - MER5A DNA MER1_type 0 189 59 312 305 85 37 chr2 210024498 210024662 -40663192 + MER5A DNA MER1_type 17 188 -1 * 2563 168 35 54 chr2 210024779 210025380 -40662474 + L1MB1 LINE L1 4823 5434 -734 877 109 0 0 chr2 210025380 210025499 -40662355 + FLAM_C SINE Alu 1 119 -14 2563 168 35 54 chr2 210025499 210025928 -40661926 + L1MB1 LINE L1 5434 5869 -299 1564 141 52 65 chr2 210025928 210026234 -40661620 + AluJb SINE Alu 5 306 -6 2563 168 35 54 chr2 210026234 210026364 -40661490 + L1MB1 LINE L1 5869 6000 -168 2315 103 3 0 chr2 210026364 210026666 -40661188 + AluSq SINE Alu 1 303 -10 2563 168 35 54 chr2 210026666 210026833 -40661021 + L1MB1 LINE L1 6000 6166 -2 1414 157 5 0 chr2 210027239 210027455 -40660399 + AluSx SINE Alu 61 277 -35 282 75 0 57 chr2 210027455 210027508 -40660346 + AluSx SINE Alu 253 302 0 2180 121 0 3 chr2 210027511 210027816 -40660038 + AluSx SINE Alu 1 304 -8 996 192 69 46 chr2 210027822 210028082 -40659772 - L1MB4 LINE L1 -155 6025 5760 400 119 30 0 chr2 210028108 210028175 -40659679 - HY5 scRNA scRNA -15 69 1 382 92 92 0 chr2 210028178 210028243 -40659611 - L1MB4 LINE L1 -742 5436 5366 1752 154 0 7 chr2 210028250 210028523 -40659331 - AluSx SINE Alu -23 289 19 536 204 19 9 chr2 210028523 210028631 -40659223 - MER33 DNA MER1_type -203 121 13 2847 16 0 0 chr2 210029602 210029913 -40657941 - AluYa5 SINE Alu 0 311 1 1962 172 3 0 chr2 210030350 210030658 -40657196 + AluSx SINE Alu 1 309 -3 25 51 0 0 chr2 210031203 210031242 -40656612 + AT_rich Low_complexity Low_complexity 1 39 0 558 261 44 6 chr2 210031680 210031860 -40655994 + L1MB7 LINE L1 5545 5731 -390 2065 137 3 0 chr2 210031933 210032233 -40655621 + AluSx SINE Alu 1 301 -11 278 307 343 0 chr2 210032897 210033037 -40654817 + MER91A DNA MER1_type 1 188 -8 2230 104 0 26 chr2 210033473 210033780 -40654074 + AluSc SINE Alu 1 299 -10 876 134 0 63 chr2 210034509 210034651 -40653203 + FLAM_C SINE Alu 1 133 0 2384 95 13 0 chr2 210034655 210034961 -40652893 + AluSg SINE Alu 1 310 0 1681 165 0 4 chr2 210035070 210035337 -40652517 + AluJb SINE Alu 25 290 -22 1571 200 4 0 chr2 210035381 210035661 -40652193 + AluJo SINE Alu 30 310 -2 1331 164 0 0 chr2 210036304 210036512 -40651342 - AluJb SINE Alu -6 306 99 760 197 78 88 chr2 210036536 210036708 -40651146 + L1MB7 LINE L1 5902 6071 -113 2190 108 0 10 chr2 210036708 210037013 -40650841 + AluSc SINE Alu 1 302 -7 760 197 78 88 chr2 210037013 210037124 -40650730 + L1MB7 LINE L1 6071 6182 -2 22 56 0 0 chr2 210037177 210037213 -40650641 + AT_rich Low_complexity Low_complexity 1 36 0 2340 92 10 0 chr2 210037804 210038108 -40649746 - AluSq SINE Alu -6 307 1 2182 128 3 0 chr2 210038437 210038733 -40649121 - AluSx SINE Alu -15 297 1 1495 166 19 58 chr2 210038842 210039155 -40648699 - AluSx SINE Alu -7 305 5 1912 129 25 7 chr2 210039342 210039628 -40648226 + AluSx SINE Alu 1 291 -21 1945 94 79 0 chr2 210039708 210039975 -40647879 + AluSg SINE Alu 1 288 -22 396 147 67 0 chr2 210039976 210040051 -40647803 + L1MDa LINE L1 1563 1642 -4898 924 141 33 94 chr2 210040052 210040207 -40647647 + L1MB3 LINE L1 5984 6124 -59 2532 58 10 0 chr2 210040207 210040515 -40647339 + AluY SINE Alu 1 311 0 924 141 33 94 chr2 210040515 210040572 -40647282 + L1MB3 LINE L1 6124 6183 0 * 1207 220 142 64 chr2 210040568 210040658 -40647196 + L1MDa LINE L1 1631 1713 -4936 1436 167 119 4 chr2 210040658 210040927 -40646927 + AluJo SINE Alu 3 302 -10 1207 220 142 64 chr2 210040927 210041024 -40646830 + L1MDa LINE L1 1713 1801 -4848 1546 173 16 0 chr2 210041024 210041279 -40646575 + AluJo SINE Alu 39 297 -15 2128 122 0 0 chr2 210041285 210041588 -40646266 + AluSg SINE Alu 3 305 -5 1207 220 142 64 chr2 210041588 210041599 -40646255 + L1MDa LINE L1 1805 1814 -4835 2160 104 3 3 chr2 210041599 210041896 -40645958 + AluSc SINE Alu 1 297 -12 2150 138 0 0 chr2 210041899 210042211 -40645643 + AluSx SINE Alu 1 312 0 1207 220 142 64 chr2 210042211 210042283 -40645571 + L1MDa LINE L1 1815 1880 -4769 1935 109 26 53 chr2 210042283 210042585 -40645269 + AluSg SINE Alu 1 294 -16 1207 220 142 64 chr2 210042585 210042634 -40645220 + L1MDa LINE L1 1880 1924 -4725 2467 61 3 6 chr2 210042634 210042945 -40644909 + AluY SINE Alu 1 310 -1 1207 220 142 64 chr2 210042945 210043575 -40644279 + L1MDa LINE L1 1924 2759 -3890 * 3362 232 30 23 chr2 210043561 210044474 -40643380 + L1M4 LINE L1 3794 4712 -1434 631 181 112 9 chr2 210044477 210044593 -40643261 + AluJb SINE Alu 5 132 -180 881 214 9 9 chr2 210044595 210044805 -40643049 + L1M4 LINE L1 4699 4908 -1238 456 92 0 0 chr2 210044796 210044861 -40642993 - L1MB4 LINE L1 -39 6141 6077 * 2045 123 10 10 chr2 210044935 210045244 -40642610 + AluSg SINE Alu 2 310 0 1855 176 60 20 chr2 210045244 210045647 -40642207 + L1 LINE L1 3884 4302 -1844 196 270 16 16 chr2 210045747 210045810 -40642044 + L2 LINE L2 3246 3308 -5 1488 166 97 4 chr2 210045816 210046094 -40641760 - AluJo SINE Alu -6 306 3 2321 67 3 13 chr2 210046188 210046486 -40641368 - AluY SINE Alu -16 295 1 1209 173 40 0 chr2 210046570 210046772 -40641082 + AluJb SINE Alu 84 293 -19 742 187 49 0 chr2 210046774 210046897 -40640957 + FLAM_C SINE Alu 4 132 -11 2188 117 3 7 chr2 210046990 210047297 -40640557 - AluSc SINE Alu -1 308 3 1324 182 108 11 chr2 210047301 210047570 -40640284 - AluJo SINE Alu -17 295 1 768 211 11 65 chr2 210048077 210048262 -40639592 - AluJo SINE Alu -18 294 120 2188 88 25 0 chr2 210048511 210048815 -40639039 - AluSc SINE Alu 0 311 1 26 30 0 0 chr2 210048821 210048854 -40639000 + AT_rich Low_complexity Low_complexity 1 33 0 2380 101 0 0 chr2 210048919 210049226 -40638628 + AluSx SINE Alu 1 307 -5 1576 105 30 38 chr2 210049237 210049377 -40638477 + L1MA2 LINE L1 6037 6176 -128 8706 81 8 1 chr2 210049377 210050440 -40637414 + MER11C LTR ERVK 1 1071 0 1576 105 30 38 chr2 210050440 210050565 -40637289 + L1MA2 LINE L1 6176 6300 -4 939 144 0 0 chr2 210050641 210050773 -40637081 - AluJo SINE Alu -169 133 2 232 270 48 0 chr2 210050895 210050958 -40636896 + L2 LINE L2 3192 3257 -15 1488 98 211 12 chr2 210051119 210051365 -40636489 + AluSc SINE Alu 1 295 -4 368 195 24 73 chr2 210051798 210051880 -40635974 - MER2 DNA MER2_type 0 345 268 1368 167 22 41 chr2 210051937 210052206 -40635648 - MER2 DNA MER2_type -80 265 2 2061 102 0 88 chr2 210052354 210052492 -40635362 + AluSx SINE Alu 1 150 -162 2262 105 0 13 chr2 210052492 210052807 -40635047 + AluY SINE Alu 1 311 0 2061 102 0 88 chr2 210052807 210052990 -40634864 + AluSx SINE Alu 150 293 -19 2230 98 26 7 chr2 210052990 210053295 -40634559 + AluSq SINE Alu 3 313 0 2061 102 0 88 chr2 210053295 210053314 -40634540 + AluSx SINE Alu 293 312 0 2429 70 0 3 chr2 210053390 210053692 -40634162 - AluSq SINE Alu -12 301 1 332 206 48 79 chr2 210054323 210054449 -40633405 + MIR3 SINE MIR 82 203 -5 23 0 0 0 chr2 210054624 210054647 -40633207 + AT_rich Low_complexity Low_complexity 1 23 0 247 208 21 0 chr2 210056682 210056730 -40631124 - L2 LINE L2 -2 3311 3263 1218 138 15 0 chr2 210056816 210057012 -40630842 - MER46B DNA MER2_type 0 236 38 1296 86 0 0 chr2 210057012 210057175 -40630679 + AluSq SINE Alu 1 163 -150 982 131 81 6 chr2 210057176 210057336 -40630518 - MER46B DNA MER2_type -189 47 1 301 136 34 17 chr2 210057289 210057348 -40630506 + MER46A DNA MER2_type 99 158 -78 * 2106 113 0 32 chr2 210058293 210058602 -40629252 + AluSg SINE Alu 1 299 -11 202 263 113 25 chr2 210058607 210058687 -40629167 - L2 LINE L2 -27 3286 3200 1938 144 0 52 chr2 210058885 210059211 -40628643 + AluJo SINE Alu 1 309 -3 2124 85 67 0 chr2 210059575 210059858 -40627996 - AluSc SINE Alu -7 302 1 792 159 16 0 chr2 210059858 210059984 -40627870 - FLAM_C SINE Alu -9 134 7 864 250 17 0 chr2 210059991 210060167 -40627687 - AluJb SINE Alu -15 297 119 284 184 0 0 chr2 210060230 210060279 -40627575 + L2 LINE L2 3188 3236 -36 180 158 184 0 chr2 210060252 210060290 -40627564 + MIR SINE MIR 206 250 -12 * 792 254 123 94 chr2 210060747 210060865 -40626989 + L1MC4a LINE L1 5265 5378 -2430 1763 142 36 4 chr2 210060865 210061139 -40626715 + AluJb SINE Alu 11 293 -19 792 254 123 94 chr2 210061139 210061294 -40626560 + L1MC4a LINE L1 5378 5527 -2281 2144 105 25 0 chr2 210061294 210061604 -40626250 + AluSq SINE Alu 1 317 0 792 254 123 94 chr2 210061604 210061997 -40625857 + L1MC4a LINE L1 5527 5952 -1856 249 190 17 17 chr2 210062000 210062058 -40625796 + (TA)n Simple_repeat Simple_repeat 1 58 0 31 58 0 0 chr2 210062157 210062209 -40625645 + AT_rich Low_complexity Low_complexity 1 52 0 2284 103 0 10 chr2 210062412 210062712 -40625142 + AluSq SINE Alu 1 297 -16 235 288 117 9 chr2 210062910 210063021 -40624833 + L1M4 LINE L1 4711 4833 -1313 555 221 0 0 chr2 210063172 210063276 -40624578 + FLAM_A SINE Alu 24 127 -15 1725 152 7 14 chr2 210063316 210063430 -40624424 + AluJb SINE Alu 22 135 -177 2289 112 0 0 chr2 210063430 210063742 -40624112 + AluSx SINE Alu 1 312 0 1725 152 7 14 chr2 210063742 210063903 -40623951 + AluJb SINE Alu 135 295 -17 986 184 0 0 chr2 210063903 210064066 -40623788 + FRAM SINE Alu 1 160 -16 2260 54 7 4 chr2 210064067 210064345 -40623509 + AluY SINE Alu 28 306 -5 201 259 129 24 chr2 210064418 210064503 -40623351 - MER5B DNA MER1_type -83 95 2 523 164 116 2 chr2 210065099 210065331 -40622523 - AluJb SINE Alu -18 294 1 875 217 71 5 chr2 210065600 210065798 -40622056 + MIR SINE MIR 32 242 -20 456 208 0 23 chr2 210065863 210065993 -40621861 + (TA)n Simple_repeat Simple_repeat 1 127 0 845 132 47 0 chr2 210065994 210066123 -40621731 - AluSg/x SINE Alu -18 292 158 2169 77 31 0 chr2 210066185 210066471 -40621383 + AluY SINE Alu 1 295 -16 690 129 43 80 chr2 210067100 210067153 -40620701 - MER20B DNA MER1_type -370 413 360 1672 166 6 32 chr2 210067153 210067466 -40620388 + AluJb SINE Alu 2 306 -6 690 129 43 80 chr2 210067466 210067575 -40620279 - MER20B DNA MER1_type -423 360 257 272 61 0 0 chr2 210067659 210067692 -40620162 + Alu SINE Alu 9 41 -260 1625 119 4 0 chr2 210067692 210067919 -40619935 + AluSg/x SINE Alu 72 299 -11 21 0 0 0 chr2 210068614 210068635 -40619219 + AT_rich Low_complexity Low_complexity 1 21 0 1074 137 88 6 chr2 210069195 210069377 -40618477 + MER30 DNA MER1_type 1 197 -33 786 140 0 127 chr2 210069536 210069686 -40618168 - FLAM_C SINE Alu -11 132 2 2265 92 0 16 chr2 210069763 210070066 -40617788 - AluSg SINE Alu -12 298 1 821 184 87 16 chr2 210073143 210073355 -40614499 - L1MB3 LINE L1 0 6183 5958 838 117 166 31 chr2 210074497 210074660 -40613194 - AluJo SINE Alu -15 297 113 210 273 0 0 chr2 210074830 210074874 -40612980 + MIR SINE MIR 45 88 -120 1374 143 115 8 chr2 210075680 210075932 -40611922 + AluJo SINE Alu 18 296 -16 2001 114 0 39 chr2 210077297 210077603 -40610251 - AluSx SINE Alu -18 294 1 346 145 0 16 chr2 210077603 210077665 -40610189 - AluSg/x SINE Alu -167 133 73 6771 156 38 76 chr2 210077765 210077959 -40609895 + L1MA4A LINE L1 2329 2529 -4319 2073 137 30 0 chr2 210077959 210078258 -40609596 + AluSx SINE Alu 1 308 -4 6771 156 38 76 chr2 210078258 210079178 -40608676 + L1MA4A LINE L1 2529 3483 -3365 1372 101 43 0 chr2 210079178 210079386 -40608468 - L1PA16 LINE L1 -11 6155 5939 6771 156 38 76 chr2 210079386 210079541 -40608313 + L1MA4A LINE L1 3483 3642 -3206 1626 156 17 50 chr2 210079541 210079842 -40608012 - AluJb SINE Alu -21 291 1 1865 174 0 10 chr2 210079845 210080144 -40607710 - AluJb SINE Alu -16 296 1 6771 156 38 76 chr2 210080144 210081370 -40606484 + L1MA4A LINE L1 3644 4729 -2119 790 149 25 0 chr2 210081409 210081530 -40606324 + FLAM_C SINE Alu 1 124 -9 3913 140 45 19 chr2 210081541 210082871 -40604983 + L1MA4A LINE L1 5164 6531 -474 1083 183 0 78 chr2 210082871 210083101 -40604753 + AluJb SINE Alu 85 296 -16 2592 136 6 33 chr2 210083109 210083476 -40604378 + L1MA4A LINE L1 6523 6875 -130 1790 122 94 17 chr2 210083476 210083764 -40604090 + AluSx SINE Alu 1 310 -2 2592 136 6 33 chr2 210083764 210083881 -40603973 + L1MA4A LINE L1 6875 6994 -11 705 241 78 35 chr2 210084190 210084422 -40603432 + MIR SINE MIR 21 262 0 2041 133 3 3 chr2 210084505 210084799 -40603055 - AluSq SINE Alu -19 294 1 1965 119 77 0 chr2 210084831 210085116 -40602738 - AluSc SINE Alu -2 307 1 1430 173 0 57 chr2 210085748 210086031 -40601823 + AluJb SINE Alu 1 267 -45 35 24 0 0 chr2 210086128 210086170 -40601684 + AT_rich Low_complexity Low_complexity 1 42 0 272 275 44 69 chr2 210087007 210087167 -40600687 + MER102a DNA MER1_type 1 156 -174 706 181 8 0 chr2 210087171 210087298 -40600556 + FLAM_C SINE Alu 1 128 -5 21 0 0 0 chr2 210087298 210087319 -40600535 + AT_rich Low_complexity Low_complexity 1 21 0 305 251 86 49 chr2 210087322 210087485 -40600369 + MER102a DNA MER1_type 150 318 -12 594 272 165 13 chr2 210087791 210088015 -40599839 - MIR SINE MIR -3 259 2 854 228 114 0 chr2 210088051 210088270 -40599584 - MIR SINE MIR -6 256 13 2376 85 0 0 chr2 210088498 210088791 -40599063 - AluSc SINE Alu -16 293 1 1997 134 7 0 chr2 210089283 210089619 -40598235 - AluSx SINE Alu 0 338 1 1063 213 180 21 chr2 210089751 210089910 -40597944 - MER113 DNA MER1_type? -29 492 360 1787 169 9 31 chr2 210089910 210090229 -40597625 - AluJo SINE Alu 0 312 1 1063 213 180 21 chr2 210090229 210090492 -40597362 - MER113 DNA MER1_type? -161 360 3 446 111 56 0 chr2 210090623 210090695 -40597159 - MADE1 DNA Mariner -4 76 1 331 274 178 25 chr2 210090913 210091070 -40596784 - L3 LINE CR1 -293 1284 1104 529 257 29 53 chr2 210091098 210091269 -40596585 - L2 LINE L2 0 3313 3147 301 297 206 45 chr2 210091311 210091621 -40596233 - L3 LINE CR1 -504 1073 714 2175 230 70 11 chr2 210091626 210092253 -40595601 - HsTC2a DNA Tc2 -3 741 78 21 0 0 0 chr2 210092391 210092412 -40595442 + AT_rich Low_complexity Low_complexity 1 21 0 3453 157 55 14 chr2 210092599 210092688 -40595166 + L1MB2 LINE L1 5005 5089 -1082 2245 123 10 0 chr2 210092688 210092998 -40594856 - AluSq SINE Alu 0 313 1 3453 157 55 14 chr2 210092998 210093785 -40594069 + L1MB2 LINE L1 5089 5901 -270 1256 136 31 0 chr2 210093967 210094195 -40593659 + L1MB2 LINE L1 5910 6144 -27 25 31 0 0 chr2 210094203 210094235 -40593619 + AT_rich Low_complexity Low_complexity 1 32 0 764 137 0 0 chr2 210094236 210094360 -40593494 - L1MB3 LINE L1 -3 6180 6057 279 331 88 66 chr2 210095323 210095504 -40592350 - L2 LINE L2 -44 3228 3044 23 33 0 0 chr2 210095972 210096002 -40591852 + AT_rich Low_complexity Low_complexity 1 30 0 1827 162 44 0 chr2 210096825 210097122 -40590732 + AluJb SINE Alu 1 310 -2 808 125 0 76 chr2 210097423 210097567 -40590287 - FLAM_C SINE Alu 0 133 1 2215 112 0 3 chr2 210098296 210098592 -40589262 - AluSq SINE Alu -18 295 1 2157 139 3 6 chr2 210098882 210099226 -40588628 - MER7A DNA MER2_type -5 341 1 360 325 90 5 chr2 210100287 210100499 -40587355 + L1ME4a LINE L1 4723 4952 -1194 21 0 0 0 chr2 210100526 210100547 -40587307 + AT_rich Low_complexity Low_complexity 1 21 0 1706 164 6 28 chr2 210100942 210101259 -40586595 + AluJo SINE Alu 1 310 -2 1542 171 24 4 chr2 210101381 210101633 -40586221 - AluJo SINE Alu -55 257 1 365 298 132 31 chr2 210101656 210101884 -40585970 + L1ME4a LINE L1 5631 5881 -240 244 244 106 32 chr2 210103093 210103216 -40584638 + MER102a DNA MER1_type 197 328 -2 40883 33 22 2 chr2 210103573 210109630 -40578224 + L1PA2 LINE L1 1 6155 0 22 0 0 0 chr2 210109630 210109652 -40578202 + AT_rich Low_complexity Low_complexity 1 22 0 461 258 50 0 chr2 210111324 210111444 -40576410 + MIR SINE MIR 116 241 -21 2563 106 8 16 chr2 210111726 210112104 -40575750 - THE1C LTR MaLR 0 375 1 312 217 217 9 chr2 210112603 210112709 -40575145 + L1MC/D LINE L1 5710 5837 -1971 255 289 0 0 chr2 210114245 210114297 -40573557 + L2 LINE L2 3209 3260 -12 1874 156 0 3 chr2 210114311 210114632 -40573222 + AluJb SINE Alu 1 320 0 225 0 0 0 chr2 210114634 210114659 -40573195 + (TG)n Simple_repeat Simple_repeat 2 26 0 5011 57 0 0 chr2 210114728 210115345 -40572509 - L1PA6 LINE L1 -1 6153 5537 634 258 76 27 chr2 210115362 210115592 -40572262 + MIR SINE MIR 2 243 -19 241 87 22 22 chr2 210115691 210115737 -40572117 + (TC)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr2 210116443 210116465 -40571389 + GC_rich Low_complexity Low_complexity 1 22 0 258 348 96 27 chr2 210117042 210117229 -40570625 - L2 LINE L2 -254 3059 2860 754 236 10 77 chr2 210117311 210117417 -40570437 - MIR SINE MIR -6 256 144 2262 102 10 3 chr2 210117417 210117720 -40570134 + AluSg SINE Alu 1 305 -5 1714 149 24 27 chr2 210117729 210118051 -40569803 - AluJo SINE Alu 0 312 1 754 236 10 77 chr2 210118051 210118142 -40569712 - MIR SINE MIR -126 136 63 2037 130 9 38 chr2 210118246 210118562 -40569292 + AluSx SINE Alu 1 307 -5 689 110 9 0 chr2 210118562 210118671 -40569183 + (GGAGA)n Simple_repeat Simple_repeat 2 111 0 258 200 33 67 chr2 210118693 210118783 -40569071 - L2 LINE L2 -638 2676 2590 514 174 0 0 chr2 210119191 210119277 -40568577 + AluJ/FLAM SINE Alu 7 92 -220 13212 104 26 36 chr2 210119278 210119372 -40568482 - Tigger1 DNA MER2_type -254 2164 2071 1667 173 46 0 chr2 210119372 210119655 -40568199 - AluSx SINE Alu -16 296 1 13212 104 26 36 chr2 210119655 210119709 -40568145 - Tigger1 DNA MER2_type -347 2071 2018 2510 56 3 0 chr2 210119709 210120012 -40567842 - AluY SINE Alu -2 309 6 13212 104 26 36 chr2 210120012 210120236 -40567618 - Tigger1 DNA MER2_type -400 2018 1793 2029 130 0 55 chr2 210120236 210120372 -40567482 + AluSx SINE Alu 1 143 -169 2196 119 10 0 chr2 210120372 210120675 -40567179 + AluSq SINE Alu 2 307 -6 2029 130 0 55 chr2 210120675 210120868 -40566986 + AluSx SINE Alu 143 312 0 13212 104 26 36 chr2 210120868 210121729 -40566125 - Tigger1 DNA MER2_type -625 1793 925 1970 148 0 3 chr2 210121729 210122039 -40565815 + AluSx SINE Alu 1 309 0 13212 104 26 36 chr2 210122039 210122986 -40564868 - Tigger1 DNA MER2_type -1493 925 1 2190 113 7 0 chr2 210123341 210123650 -40564204 - AluSp SINE Alu -2 311 1 34 24 0 0 chr2 210124541 210124582 -40563272 + AT_rich Low_complexity Low_complexity 1 41 0 10100 22 1 189 chr2 210124582 210126282 -40561572 - SVA Other Other -7 1379 1 181 57 57 0 chr2 210126564 210126599 -40561255 + (TA)n Simple_repeat Simple_repeat 1 37 0 1388 150 0 13 chr2 210126626 210126852 -40561002 - AluJb SINE Alu -3 309 87 1682 200 0 0 chr2 210127743 210128024 -40559830 + AluJo SINE Alu 2 281 -31 370 0 0 0 chr2 210128024 210128065 -40559789 + (TAAAA)n Simple_repeat Simple_repeat 1 180 0 216 300 62 38 chr2 210128256 210128336 -40559518 + L2 LINE L2 3083 3164 -108 1647 160 84 56 chr2 210129547 210130055 -40557799 - LTR1B LTR ERV1 -2 824 247 23 33 0 0 chr2 210130055 210130085 -40557769 + AT_rich Low_complexity Low_complexity 1 30 0 474 316 67 13 chr2 210130854 210131079 -40556775 + MIR SINE MIR 13 249 -13 229 204 0 0 chr2 210132028 210132072 -40555782 + GA-rich Low_complexity Low_complexity 1 44 0 21006 65 5 1 chr2 210132202 210135699 -40552155 + L1PA6 LINE L1 2629 6154 0 2141 132 0 7 chr2 210135720 210136023 -40551831 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 210136620 210136641 -40551213 + AT_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr2 210136827 210136858 -40550996 + (TTA)n Simple_repeat Simple_repeat 3 33 0 7657 32 0 0 chr2 210136858 210137855 -40549999 - L1PA4 LINE L1 -18 6137 5141 212 186 0 51 chr2 210137983 210138042 -40549812 - L2 LINE L2 -1 3312 3257 1179 128 30 60 chr2 210138130 210138364 -40549490 + MER106A DNA MER1_type 1 227 -9 536 276 47 31 chr2 210138520 210138712 -40549142 + MER117 DNA MER1_type 3 197 0 2458 45 14 3 chr2 210138819 210139108 -40548746 + AluY SINE Alu 1 292 -19 1982 133 14 0 chr2 210139278 210139593 -40548261 + AluSx SINE Alu 2 320 0 1286 255 149 24 chr2 210139594 210140371 -40547483 - L1ME3 LINE L1 -37 6133 5315 2273 93 3 37 chr2 210140379 210140700 -40547154 - AluSx SINE Alu -2 310 1 840 150 0 8 chr2 210140717 210140844 -40547010 + FLAM_C SINE Alu 1 126 -17 21 0 0 0 chr2 210140844 210140865 -40546989 + AT_rich Low_complexity Low_complexity 1 21 0 254 307 95 6 chr2 210140882 210141061 -40546793 - L1ME3 LINE L1 -873 5273 5079 4363 44 25 0 chr2 210141113 210141640 -40546214 - L1PA4 LINE L1 -3 6152 5613 1109 127 0 0 chr2 210141640 210141790 -40546064 + AluSc SINE Alu 144 293 -16 25 0 0 0 chr2 210141937 210141962 -40545892 + AT_rich Low_complexity Low_complexity 1 25 0 2130 128 0 16 chr2 210141963 210142275 -40545579 + AluSx SINE Alu 1 307 -5 224 336 0 45 chr2 210142835 210142945 -40544909 + MIR SINE MIR 113 217 -45 2186 123 0 3 chr2 210144175 210144483 -40543371 + AluSx SINE Alu 1 307 -5 2334 62 48 0 chr2 210145095 210145387 -40542467 + AluY SINE Alu 1 306 -5 211 276 17 0 chr2 210145579 210145637 -40542217 - MER5A DNA MER1_type -3 186 128 1682 177 3 19 chr2 210145984 210146301 -40541553 - AluJo SINE Alu 0 312 1 2318 107 7 0 chr2 210146516 210146826 -40541028 + AluSp SINE Alu 1 312 -1 233 169 14 113 chr2 210146857 210146928 -40540926 - MIR SINE MIR -179 83 20 597 279 58 33 chr2 210147564 210147840 -40540014 + L1ME LINE L1 5538 5820 -301 25 31 0 0 chr2 210148126 210148158 -40539696 + AT_rich Low_complexity Low_complexity 1 32 0 918 229 82 95 chr2 210148510 210149057 -40538797 + MER34 LTR ERV1 3 542 0 1921 150 0 14 chr2 210149702 210149996 -40537858 + AluJo SINE Alu 1 290 -22 2282 109 0 0 chr2 210150020 210150322 -40537532 + AluSc SINE Alu 1 302 -7 2156 116 3 0 chr2 210150424 210150727 -40537127 - AluSc SINE Alu -5 304 1 697 208 0 8 chr2 210150945 210151070 -40536784 - FLAM_A SINE Alu -5 128 5 21 0 0 0 chr2 210151221 210151242 -40536612 + AT_rich Low_complexity Low_complexity 1 21 0 2293 99 3 0 chr2 210151839 210152131 -40535723 + AluSp SINE Alu 1 293 -20 8380 121 118 39 chr2 210152210 210153785 -40534069 + pTR5 LTR ERV1 741 2438 0 2474 216 27 14 chr2 210154053 210154126 -40533728 + L1ME4a LINE L1 5024 5095 -1026 1721 173 10 3 chr2 210154126 210154415 -40533439 + AluJb SINE Alu 1 291 -21 2474 216 27 14 chr2 210154415 210154879 -40532975 + L1ME4a LINE L1 5095 5552 -569 2346 98 21 53 chr2 210154879 210155081 -40532773 - THE1B LTR MaLR 0 364 178 2352 97 10 3 chr2 210155081 210155389 -40532465 - AluSg SINE Alu 0 310 1 2346 98 21 53 chr2 210155389 210155562 -40532292 - THE1B LTR MaLR -186 178 1 2474 216 27 14 chr2 210155562 210155815 -40532039 + L1ME4a LINE L1 5552 5800 -321 580 195 23 16 chr2 210155815 210155943 -40531911 + FLAM_C SINE Alu 1 129 -4 2474 216 27 14 chr2 210155943 210156244 -40531610 + L1ME4a LINE L1 5800 6110 -11 357 317 81 0 chr2 210156337 210156460 -40531394 + MIR3 SINE MIR 38 170 -38 2166 87 67 8 chr2 210156604 210156972 -40530882 - LTR7 LTR ERV1 0 450 1 26411 113 7 19 chr2 210156972 210159654 -40528200 - HERVH LTR ERV1 0 7713 5000 7235 43 21 0 chr2 210159654 210160702 -40527152 + L1PA5 LINE L1 5088 6154 0 26411 113 7 19 chr2 210160702 210165554 -40522300 - HERVH LTR ERV1 -2713 5000 1 2258 79 78 5 chr2 210165554 210165921 -40521933 - LTR7 LTR ERV1 0 450 1 1540 123 9 0 chr2 210166314 210166526 -40521328 + AluJb SINE Alu 1 214 -98 514 143 22 22 chr2 210166563 210166654 -40521200 + AluSg/x SINE Alu 207 297 -15 1673 164 14 19 chr2 210167023 210167370 -40520484 - MER4A LTR ERV1 0 664 261 623 136 19 10 chr2 210167366 210167469 -40520385 - MER4A LTR ERV1 -560 104 1 * 1707 156 14 3 chr2 210168037 210168320 -40519534 + AluSx SINE Alu 13 298 -14 525 47 101 0 chr2 210168424 210168572 -40519282 + (TA)n Simple_repeat Simple_repeat 1 163 0 659 200 0 0 chr2 210168602 210168712 -40519142 - FLAM_A SINE Alu -32 110 1 2848 83 0 0 chr2 210168986 210169347 -40518507 - THE1B LTR MaLR -3 361 1 10846 104 20 21 chr2 210169347 210169423 -40518431 - THE1B-int LTR MaLR 0 1580 1505 2114 130 0 0 chr2 210169423 210169745 -40518109 - AluSq SINE Alu 0 322 1 10846 104 20 21 chr2 210169745 210171250 -40516604 - THE1B-int LTR MaLR -75 1505 1 2469 90 61 9 chr2 210171250 210171596 -40516258 - THE1B LTR MaLR 0 364 1 222 189 117 63 chr2 210171893 210172004 -40515850 - L2 LINE L2 -238 3034 2918 195 129 0 0 chr2 210172726 210172757 -40515097 + (TC)n Simple_repeat Simple_repeat 1 31 0 23 0 0 0 chr2 210173070 210173093 -40514761 + AT_rich Low_complexity Low_complexity 1 23 0 2228 93 0 14 chr2 210173594 210173884 -40513970 - AluSc SINE Alu -23 286 1 2167 106 45 0 chr2 210174378 210174670 -40513184 - AluSx SINE Alu -7 305 1 21 36 0 0 chr2 210174761 210174789 -40513065 + AT_rich Low_complexity Low_complexity 1 28 0 487 279 80 32 chr2 210175784 210176035 -40511819 - MARNA DNA Mariner -183 403 141 2004 128 3 7 chr2 210176126 210176450 -40511404 - AluSx SINE Alu 0 323 1 2090 121 30 7 chr2 210176562 210176867 -40510987 - AluJo SINE Alu 0 312 1 1578 162 89 0 chr2 210176900 210177171 -40510683 + AluSx SINE Alu 1 295 -17 1371 66 33 0 chr2 210177171 210177353 -40510501 + L1P LINE L1 2117 2304 -3842 808 213 30 0 chr2 210227526 210227695 -40460159 + MIR SINE MIR 2 175 -87 449 53 27 13 chr2 210228541 210228616 -40459238 - L1PB1 LINE L1 -120 6031 5956 279 0 0 0 chr2 210228682 210228713 -40459141 + (TA)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr2 210228713 210228734 -40459120 + (T)n Simple_repeat Simple_repeat 1 21 0 250 248 152 9 chr2 210229110 210229215 -40458639 + MER5B DNA MER1_type 59 178 0 429 287 60 27 chr2 210229724 210229874 -40457980 - MIR SINE MIR -85 177 23 279 287 0 11 chr2 210230677 210230764 -40457090 - L2 LINE L2 0 3272 3187 572 236 103 18 chr2 210231174 210231390 -40456464 - MIR SINE MIR 0 262 27 367 222 50 10 chr2 210232043 210232142 -40455712 + L2 LINE L2 3211 3313 0 381 288 263 5 chr2 210232175 210232578 -40455276 + L2 LINE L2 2249 2755 -559 2181 111 0 7 chr2 210233008 210233306 -40454548 - AluSc SINE Alu -13 296 1 292 278 132 58 chr2 210234149 210234635 -40453219 + HAL1 LINE L1 916 1437 -1070 746 195 133 26 chr2 210234703 210234929 -40452925 - MIR SINE MIR -2 260 11 402 247 58 63 chr2 210234933 210235107 -40452747 + HAL1 LINE L1 1506 1678 -829 184 333 9 27 chr2 210235614 210235725 -40452129 + MIR SINE MIR 71 179 -83 830 271 9 9 chr2 210235781 210236010 -40451844 + MIR SINE MIR 20 248 -14 26 0 0 0 chr2 210236122 210236148 -40451706 + AT_rich Low_complexity Low_complexity 1 26 0 1224 101 0 0 chr2 210236148 210236306 -40451548 - AluSg/x SINE Alu -22 290 133 186 43 0 0 chr2 210236306 210236329 -40451525 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2151 106 3 0 chr2 210236331 210236614 -40451240 - AluSg SINE Alu -26 284 1 318 286 116 9 chr2 210238254 210238376 -40449478 + MIR3 SINE MIR 24 159 -49 295 247 25 29 chr2 210238516 210238625 -40449229 + MIR SINE MIR 64 169 -51 266 320 10 10 chr2 210238943 210239046 -40448808 - Charlie8 DNA MER1_type -2179 238 136 7180 160 3 11 chr2 210239046 210239949 -40447905 + L1P LINE L1 4015 4908 -1238 2241 105 0 0 chr2 210239949 210240262 -40447592 + AluSx SINE Alu 1 313 0 7180 160 3 11 chr2 210240262 210240596 -40447258 + L1P LINE L1 4908 5243 -903 195 342 0 9 chr2 210240774 210240885 -40446969 + L2 LINE L2 2140 2249 -1065 2268 120 3 0 chr2 210241339 210241648 -40446206 + AluSp SINE Alu 3 312 -1 257 98 0 78 chr2 210241931 210241982 -40445872 + AluJo/FLAM SINE Alu 85 131 -171 2216 114 6 19 chr2 210241984 210242301 -40445553 + AluSq SINE Alu 1 313 0 182 310 90 0 chr2 210242613 210242713 -40445141 + L2 LINE L2 3104 3212 -60 2415 80 0 7 chr2 210243127 210243428 -40444426 - AluSq SINE Alu -14 299 1 2314 111 0 0 chr2 210243843 210244149 -40443705 - AluSx SINE Alu -6 306 1 2350 92 0 3 chr2 210244158 210244453 -40443401 - AluSc SINE Alu -15 294 1 225 291 97 19 chr2 210244538 210244641 -40443213 + MIR SINE MIR 19 129 -133 658 249 44 83 chr2 210244695 210244924 -40442930 + LTR50 LTR ERVL 387 606 -189 2646 176 38 36 chr2 210244926 210245477 -40442377 + MER68 LTR ERV1 1 552 -10 1417 104 5 10 chr2 210245562 210245763 -40442091 - AluSg/x SINE Alu 0 310 111 2272 117 0 0 chr2 210245939 210246238 -40441616 + AluSq SINE Alu 1 299 -14 635 130 0 37 chr2 210246241 210246349 -40441505 - FLAM_C SINE Alu -2 141 38 2142 113 3 0 chr2 210246661 210246952 -40440902 + AluY SINE Alu 1 292 -19 511 60 0 0 chr2 210247995 210248062 -40439792 + Alu SINE Alu 237 303 -8 2002 185 49 66 chr2 210248062 210248575 -40439279 + MLT2B3 LTR ERVL 1 504 -50 1622 161 39 21 chr2 210248620 210248774 -40439080 - AluJo SINE Alu -14 298 135 1509 151 121 15 chr2 210248774 210249039 -40438815 - AluSg1 SINE Alu -13 296 4 1622 161 39 21 chr2 210249039 210249164 -40438690 - AluJo SINE Alu -177 135 14 1380 245 68 93 chr2 210249175 210249796 -40438058 - HERV16 LTR ERVL -2927 2069 1492 1481 117 36 5 chr2 210250033 210250256 -40437598 + AluSg/x SINE Alu 69 298 -14 314 221 58 0 chr2 210250259 210250345 -40437509 - MLT1L LTR MaLR -18 597 507 1146 175 27 18 chr2 210250357 210250580 -40437274 + MER50 LTR ERV1 1 225 -509 4584 123 107 76 chr2 210250580 210251935 -40435919 - pTR5 LTR ERV1 -12 2426 741 2247 107 10 0 chr2 210252507 210252796 -40435058 - AluSg SINE Alu -18 292 1 481 155 68 10 chr2 210252802 210252905 -40434949 - AluY SINE Alu -3 308 200 216 0 0 0 chr2 210252920 210252944 -40434910 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1810 124 81 11 chr2 210253403 210253676 -40434178 - AluSc SINE Alu -17 292 1 342 0 0 0 chr2 210253819 210253857 -40433997 + (TG)n Simple_repeat Simple_repeat 1 38 0 415 206 93 9 chr2 210253881 210253988 -40433866 - MER5A DNA MER1_type 0 189 74 570 160 28 35 chr2 210254296 210254440 -40433414 - MER20B DNA MER1_type -59 724 582 904 186 14 27 chr2 210254762 210254982 -40432872 - L1MB4 LINE L1 -2 6178 5962 2194 95 7 10 chr2 210255424 210255719 -40432135 - AluSc SINE Alu -15 294 1 974 255 65 14 chr2 210255878 210256172 -40431682 + LTR16A LTR ERVL 63 371 -79 2391 90 0 0 chr2 210256195 210256495 -40431359 - AluY SINE Alu -11 300 1 2211 113 0 3 chr2 210256495 210256795 -40431059 - AluSq SINE Alu -13 300 1 926 96 0 29 chr2 210256822 210256958 -40430896 - FLAM_C SINE Alu 0 133 2 329 226 0 0 chr2 210256969 210257031 -40430823 + LTR16A LTR ERVL 389 450 0 405 0 0 0 chr2 210257308 210257353 -40430501 + (CA)n Simple_repeat Simple_repeat 2 46 0 229 200 111 0 chr2 210257372 210257417 -40430437 + Alu SINE Alu 120 169 -133 2230 97 7 3 chr2 210257749 210258047 -40429807 + AluSp SINE Alu 2 300 -13 1794 95 0 0 chr2 210258151 210258372 -40429482 + AluSx SINE Alu 1 221 -91 1099 173 0 0 chr2 210259812 210259991 -40427863 - AluJb SINE Alu -1 311 133 21 0 0 0 chr2 210260595 210260616 -40427238 + AT_rich Low_complexity Low_complexity 1 21 0 582 69 0 23 chr2 210260705 210260792 -40427062 - Alu SINE Alu 0 312 228 709 245 7 0 chr2 210260899 210261054 -40426800 + AluJb SINE Alu 145 300 -12 699 79 0 138 chr2 210261926 210262078 -40425776 - FRAM SINE Alu -20 156 26 547 234 260 46 chr2 210264266 210264991 -40422863 - L1ME2 LINE L1 -292 5872 5369 1836 164 3 16 chr2 210264607 210264918 -40422936 - AluJb SINE Alu -5 307 1 274 289 22 78 chr2 210264918 210265024 -40422830 - L1PA8A LINE L1 -705 5426 5333 509 160 50 0 chr2 210265048 210265148 -40422706 - L1MB3 LINE L1 0 6183 6079 843 214 34 63 chr2 210265192 210265430 -40422424 + MER112 DNA MER1_type 29 259 -1 1594 252 69 74 chr2 210265430 210265702 -40422152 - L1ME2 LINE L1 -832 5314 5042 2221 111 3 3 chr2 210265702 210265999 -40421855 - AluSx SINE Alu -15 297 1 1594 252 69 74 chr2 210265999 210266236 -40421618 - L1ME2 LINE L1 -1104 5042 4805 2367 112 24 27 chr2 210266236 210266612 -40421242 + THE1C LTR MaLR 1 375 0 1594 252 69 74 chr2 210266612 210266912 -40420942 - L1ME2 LINE L1 -1341 4805 4507 2032 152 7 0 chr2 210266912 210267222 -40420632 - AluSx SINE Alu 0 312 1 1594 252 69 74 chr2 210267222 210267368 -40420486 - L1ME2 LINE L1 -1639 4507 4362 671 188 120 23 chr2 210267471 210267604 -40420250 + MER58A DNA MER1_type 1 146 0 1262 135 0 5 chr2 210268043 210268228 -40419626 - AluSg SINE Alu -126 184 1 1747 161 17 7 chr2 210268907 210269199 -40418655 - AluJo SINE Alu -15 297 3 197 175 140 18 chr2 210269235 210269292 -40418562 + MIR SINE MIR 30 93 -115 2029 112 42 3 chr2 210269902 210270188 -40417666 - AluSq SINE Alu -12 301 5 417 262 91 14 chr2 210271067 210271228 -40416626 + L1MC4a LINE L1 6671 6869 -916 1915 101 65 7 chr2 210271233 210271511 -40416343 - AluSx SINE Alu -16 296 3 863 53 150 164 chr2 210272609 210272835 -40415019 + L1MA1 LINE L1 6039 6261 -41 1077 185 0 0 chr2 210273261 210273434 -40414420 - AluJb SINE Alu -14 298 126 901 144 8 0 chr2 210273542 210273674 -40414180 - AluJb SINE Alu -179 133 1 687 159 9 0 chr2 210273737 210273872 -40413982 + FLAM_C SINE Alu 6 141 0 1995 133 10 7 chr2 210273971 210274273 -40413581 + AluSq SINE Alu 1 303 -10 191 323 131 0 chr2 210274367 210274466 -40413388 + L2 LINE L2 3161 3272 0 192 77 0 0 chr2 210275080 210275106 -40412748 + (A)n Simple_repeat Simple_repeat 1 26 0 2257 113 0 0 chr2 210275212 210275512 -40412342 - AluSx SINE Alu -12 300 1 1064 164 5 21 chr2 210276197 210276386 -40411468 - AluJb SINE Alu 0 312 127 230 213 0 43 chr2 210276398 210276492 -40411362 - L1MC4 LINE L1 -1339 6703 6614 746 149 0 101 chr2 210276497 210276645 -40411209 - FLAM_C SINE Alu -9 134 2 2224 112 13 3 chr2 210277091 210277396 -40410458 - AluSx SINE Alu -4 308 1 1285 62 119 6 chr2 210277431 210277461 -40410393 - MER107 DNA MER1_type 0 197 172 203 0 0 36 chr2 210277461 210277489 -40410365 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1285 62 119 6 chr2 210277489 210277634 -40410220 - MER107 DNA MER1_type -25 172 2 569 192 5 119 chr2 210277742 210277961 -40409893 - L1MC4a LINE L1 -1 7807 7614 1407 135 0 0 chr2 210277961 210278154 -40409700 - AluSg/x SINE Alu -15 297 105 783 215 0 0 chr2 210278254 210278398 -40409456 + AluSg/x SINE Alu 156 299 -11 1536 199 7 20 chr2 210278455 210278621 -40409233 - AluJo SINE Alu -14 298 136 2390 92 7 0 chr2 210278621 210278927 -40408927 - AluSq SINE Alu -5 308 1 1536 199 7 20 chr2 210278927 210279062 -40408792 - AluJo SINE Alu -176 136 1 189 250 250 0 chr2 210279780 210279868 -40407986 + MIR SINE MIR 59 168 -94 2291 82 0 39 chr2 210280024 210280329 -40407525 + AluY SINE Alu 5 297 -14 450 205 186 13 chr2 210280430 210280586 -40407268 + MIR SINE MIR 78 260 -2 230 169 0 31 chr2 210281097 210281162 -40406692 + L1MC4 LINE L1 6641 6703 -1339 363 44 0 0 chr2 210281163 210281208 -40406646 + (TG)n Simple_repeat Simple_repeat 2 46 0 180 0 0 0 chr2 210281207 210281227 -40406627 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 2181 120 3 7 chr2 210281227 210281527 -40406327 - AluSq SINE Alu -10 303 5 527 195 0 18 chr2 210281542 210281655 -40406199 - AluJb SINE Alu 0 312 202 2230 85 7 7 chr2 210281689 210281983 -40405871 - AluSg SINE Alu -10 300 7 22 0 0 0 chr2 210282643 210282665 -40405189 + AT_rich Low_complexity Low_complexity 1 22 0 1492 108 5 0 chr2 210282895 210283090 -40404764 - AluSg/x SINE Alu -13 299 104 2370 102 3 0 chr2 210283231 210283536 -40404318 + AluSx SINE Alu 1 306 -6 1680 184 48 12 chr2 210284321 210284652 -40403202 + THE1B LTR MaLR 19 361 -3 2138 110 0 29 chr2 210284771 210285080 -40402774 - AluSx SINE Alu -12 300 1 864 153 67 0 chr2 210285080 210285230 -40402624 - FRAM SINE Alu -6 170 11 185 0 40 0 chr2 210285237 210285262 -40402592 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2343 94 3 7 chr2 210285264 210285573 -40402281 - AluSg SINE Alu -2 308 1 2112 179 103 12 chr2 210285993 210286412 -40401442 - LTR32 LTR ERVL 0 471 15 1859 106 19 8 chr2 210286640 210286904 -40400950 + MER50 LTR ERV1 434 700 -34 323 248 28 85 chr2 210287346 210287487 -40400367 - MLT1L LTR MaLR -351 264 132 877 259 77 88 chr2 210288094 210288538 -40399316 + L2 LINE L2 2650 3097 -216 180 0 0 0 chr2 210288538 210288558 -40399296 + (TTA)n Simple_repeat Simple_repeat 2 21 0 877 259 77 88 chr2 210288558 210288573 -40399281 + L2 LINE L2 3097 3111 -202 2173 82 10 27 chr2 210288573 210288867 -40398987 - AluSx SINE Alu -23 289 1 877 259 77 88 chr2 210288867 210289083 -40398771 + L2 LINE L2 3111 3313 0 1841 167 14 3 chr2 210289158 210289511 -40398343 - AluJo SINE Alu 0 356 1 2333 119 0 0 chr2 210289519 210289829 -40398025 - AluSx SINE Alu -2 310 1 253 361 58 21 chr2 210290088 210290279 -40397575 + L3 LINE CR1 586 783 -794 1555 185 14 28 chr2 210290418 210290704 -40397150 + AluJo SINE Alu 1 282 -30 1998 177 151 61 chr2 210290780 210290934 -40396920 - MER92B LTR ERV1 -10 626 487 2469 83 0 0 chr2 210290934 210291236 -40396618 - AluSc SINE Alu -7 302 1 1998 177 151 61 chr2 210291236 210291652 -40396202 - MER92B LTR ERV1 -149 487 5 372 133 0 0 chr2 210291706 210291766 -40396088 + (CA)n Simple_repeat Simple_repeat 2 61 0 2088 120 0 21 chr2 210292127 210292418 -40395436 - AluSg SINE Alu -15 295 11 472 272 60 104 chr2 210292498 210292814 -40395040 + L3 LINE CR1 1086 1387 -190 896 198 64 6 chr2 210293027 210293199 -40394655 + MER58A DNA MER1_type 37 218 -6 1910 136 73 0 chr2 210293437 210293723 -40394131 + AluSg SINE Alu 1 307 -3 1730 177 7 7 chr2 210294463 210294773 -40393081 + AluJo SINE Alu 2 311 -1 2321 116 0 3 chr2 210294948 210295259 -40392595 + AluSg SINE Alu 1 310 0 384 266 73 9 chr2 210295340 210295449 -40392405 - L2 LINE L2 -14 3299 3184 219 188 0 0 chr2 210295687 210295735 -40392119 + (TA)n Simple_repeat Simple_repeat 1 48 0 483 104 26 0 chr2 210295744 210295821 -40392033 + Alu SINE Alu 232 310 0 2343 91 0 7 chr2 210296007 210296305 -40391549 + AluSx SINE Alu 1 296 -16 1126 132 35 7 chr2 210296459 210296671 -40391183 - L1MA5A LINE L1 -15 6276 6065 2143 111 49 31 chr2 210296671 210296995 -40390859 + MER1B DNA MER1_type 4 333 -6 2187 131 0 48 chr2 210297003 210297127 -40390727 - L1MA5A LINE L1 -216 6081 5953 2421 69 0 28 chr2 210297127 210297445 -40390409 - AluY SINE Alu -1 310 2 2340 76 3 3 chr2 210297454 210297745 -40390109 - AluSc SINE Alu -18 291 1 2187 131 0 48 chr2 210297745 210297940 -40389914 - L1MA5A LINE L1 -352 5945 5742 1601 206 6 3 chr2 210297940 210298251 -40389603 - AluJo SINE Alu 0 312 1 1377 157 18 136 chr2 210298251 210298583 -40389271 - AluJb SINE Alu -7 295 3 2187 131 0 48 chr2 210298583 210298647 -40389207 - L1MA5A LINE L1 -553 5744 5705 373 194 0 28 chr2 210298833 210298905 -40388949 - MSTC LTR MaLR -358 70 1 2156 135 11 52 chr2 210299101 210299179 -40388675 + MER7A DNA MER2_type 1 81 -2957 2388 85 0 0 chr2 210299179 210299474 -40388380 + AluSc SINE Alu 1 295 -14 2156 135 11 52 chr2 210299474 210299758 -40388096 + MER7A DNA MER2_type 81 346 0 626 260 45 45 chr2 210300028 210300228 -40387626 + MLT1L LTR MaLR 201 400 -215 406 257 62 60 chr2 210300787 210301132 -40386722 + MLT1K LTR MaLR 203 580 -8 2352 96 0 7 chr2 210301146 210301447 -40386407 + AluSx SINE Alu 1 299 -13 2268 95 6 44 chr2 210301461 210301604 -40386250 + AluSx SINE Alu 1 148 -164 198 0 0 0 chr2 210301604 210301626 -40386228 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 2268 95 6 44 chr2 210301626 210301799 -40386055 + AluSx SINE Alu 148 305 -7 1301 157 60 135 chr2 210302059 210302438 -40385416 - MLT1A1 LTR MaLR 0 365 45 2228 115 0 3 chr2 210302438 210302743 -40385111 - AluSx SINE Alu -8 304 1 1301 157 60 135 chr2 210302743 210302785 -40385069 - MLT1A1 LTR MaLR -320 45 1 622 161 12 99 chr2 210303574 210303735 -40384119 + FRAM SINE Alu 20 166 -10 1719 100 21 0 chr2 210303745 210303984 -40383870 + AluSp SINE Alu 66 309 -4 2107 137 0 0 chr2 210304110 210304402 -40383452 + AluSx SINE Alu 1 292 -20 1567 153 92 18 chr2 210304474 210304755 -40383099 - AluJb SINE Alu 0 312 11 538 184 54 115 chr2 210304770 210304943 -40382911 + L1MC5 LINE L1 7516 7667 -294 2230 120 0 0 chr2 210304943 210305244 -40382610 - AluSx SINE Alu -9 303 3 538 184 54 115 chr2 210305244 210305348 -40382506 + L1MC5 LINE L1 7667 7776 -185 630 154 0 55 chr2 210305559 210305693 -40382161 - FLAM_C SINE Alu 0 147 20 2364 86 10 13 chr2 210305780 210306083 -40381771 - AluSx SINE Alu -10 302 1 384 267 67 12 chr2 210306222 210306387 -40381467 + L1ME4a LINE L1 5760 5933 -188 253 294 76 0 chr2 210306402 210306494 -40381360 + MIR3 SINE MIR 99 197 -11 201 200 33 60 chr2 210306591 210306741 -40381113 + (TTATA)n Simple_repeat Simple_repeat 3 148 0 * 224 173 99 25 chr2 210306632 210306794 -40381060 + (TTAA)n Simple_repeat Simple_repeat 4 177 0 1857 149 0 4 chr2 210306921 210307197 -40380657 + AluJb SINE Alu 1 275 -37 693 163 111 0 chr2 210307202 210307337 -40380517 - MLT1A1 LTR MaLR -215 150 1 852 187 45 0 chr2 210307413 210307568 -40380286 - FRAM SINE Alu -14 162 1 616 278 143 36 chr2 210307595 210308016 -40379838 + L1ME LINE L1 5271 5736 -385 368 297 67 42 chr2 210308552 210308754 -40379100 - MIR SINE MIR -14 248 38 1941 150 0 7 chr2 210308754 210309048 -40378806 - AluSx SINE Alu -18 294 3 368 297 67 42 chr2 210309048 210309084 -40378770 - MIR SINE MIR -224 38 4 2261 154 95 0 chr2 210309340 210309729 -40378125 + MSTB LTR MaLR 1 426 0 2106 238 73 30 chr2 210310028 210310662 -40377192 - HsTC2c DNA Tc2 -4 725 65 346 350 0 8 chr2 210310734 210310854 -40377000 - MIR SINE MIR -121 141 23 857 235 123 8 chr2 210311112 210311372 -40376482 + LTR16A1 LTR ERVL 168 457 0 1901 168 0 13 chr2 210311432 210311735 -40376119 - AluJb SINE Alu -13 299 1 192 272 54 43 chr2 210314239 210314331 -40373523 + MIR SINE MIR 100 192 -70 862 245 106 61 chr2 210314363 210314639 -40373215 - L2 LINE L2 -45 3268 3006 2732 23 7 3 chr2 210314639 210314949 -40372905 + AluY SINE Alu 1 311 0 862 245 106 61 chr2 210314949 210315241 -40372613 - L2 LINE L2 -307 3006 2678 4457 124 20 25 chr2 210315426 210316117 -40371737 - LTR12 LTR ERV1 0 688 1 794 236 61 47 chr2 210316194 210316490 -40371364 - pTR5 LTR ERV1 -1410 1028 729 1853 152 13 20 chr2 210316541 210316843 -40371011 + AluJo SINE Alu 1 300 -12 411 235 147 36 chr2 210316843 210317094 -40370760 + L1MC5 LINE L1 7377 7655 -306 2369 82 7 0 chr2 210317094 210317385 -40370469 + AluSp SINE Alu 1 293 -20 223 164 30 15 chr2 210317589 210317656 -40370198 + (TTATA)n Simple_repeat Simple_repeat 2 69 0 238 269 55 59 chr2 210318778 210318839 -40369015 - L1M4 LINE L1 -2701 3445 3385 1988 164 3 60 chr2 210318839 210319157 -40368697 - MLT1A1 LTR MaLR 0 365 71 2328 77 0 10 chr2 210319157 210319456 -40368398 - AluSq SINE Alu -17 296 1 1988 164 3 60 chr2 210319456 210319520 -40368334 - MLT1A1 LTR MaLR -294 71 5 238 269 55 59 chr2 210319520 210319729 -40368125 - L1M4 LINE L1 -2761 3385 3176 295 335 71 48 chr2 210320240 210320392 -40367462 + L2 LINE L2 2832 2979 -334 2040 121 16 32 chr2 210320392 210320707 -40367147 - AluSx SINE Alu -2 310 1 295 335 71 48 chr2 210320707 210321017 -40366837 + L2 LINE L2 2979 3305 -8 2235 90 41 0 chr2 210321191 210321481 -40366373 - AluY SINE Alu -9 302 1 1537 228 8 16 chr2 210321751 210322115 -40365739 - MLT1A1 LTR MaLR 0 365 5 2421 159 48 11 chr2 210322253 210322692 -40365162 - MSTB2 LTR MaLR 0 457 3 1967 137 28 0 chr2 210322874 210323159 -40364695 - AluSx SINE Alu -19 293 1 279 0 0 0 chr2 210323633 210323664 -40364190 + (TC)n Simple_repeat Simple_repeat 2 32 0 1796 119 36 29 chr2 210323664 210323941 -40363913 - AluJo SINE Alu -27 285 7 355 243 9 28 chr2 210324630 210324737 -40363117 - LTR16C LTR ERVL -2 489 385 2146 126 3 3 chr2 210325682 210325976 -40361878 - AluJb SINE Alu -18 294 1 195 139 0 0 chr2 210326120 210326156 -40361698 + (TG)n Simple_repeat Simple_repeat 1 36 0 317 163 104 96 chr2 210326187 210326322 -40361532 + MLT1K LTR MaLR 449 584 -4 1658 147 11 23 chr2 210326357 210326622 -40361232 - AluJb SINE Alu -45 267 6 323 365 106 20 chr2 210326654 210326909 -40360945 - L1ME LINE L1 -552 5569 5293 2083 138 0 3 chr2 210327096 210327393 -40360461 - AluSx SINE Alu -16 296 1 298 301 58 10 chr2 210327395 210327498 -40360356 + L2 LINE L2 2968 3075 -238 1859 155 14 0 chr2 210327667 210327951 -40359903 - AluSx SINE Alu -21 291 4 1860 156 13 7 chr2 210328397 210328698 -40359156 - AluJo SINE Alu -9 303 1 2277 104 0 22 chr2 210329122 210329439 -40358415 + AluSx SINE Alu 1 310 -2 484 264 72 18 chr2 210329568 210329735 -40358119 + AluJb SINE Alu 122 297 -15 2130 136 3 0 chr2 210329782 210330084 -40357770 + AluSx SINE Alu 1 303 -9 927 174 126 123 chr2 210330091 210330561 -40357293 - L1MC5 LINE L1 -77 7884 7414 2412 84 3 0 chr2 210330735 210331033 -40356821 - AluSx SINE Alu -13 299 1 751 209 90 0 chr2 210331045 210331222 -40356632 + L1MD1 LINE L1 5659 5851 -391 727 131 0 0 chr2 210331555 210331654 -40356200 - AluSg/x SINE Alu -20 292 194 2007 126 0 4 chr2 210331654 210331924 -40355930 - AluSq SINE Alu -44 269 1 1350 185 11 36 chr2 210332195 210332471 -40355383 - AluJb SINE Alu -26 286 34 270 0 0 0 chr2 210332487 210332517 -40355337 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2242 89 0 0 chr2 210332517 210332797 -40355057 - AluSg1 SINE Alu -29 280 1 237 311 38 61 chr2 210333780 210333912 -40353942 - MER5A DNA MER1_type -35 154 26 1287 95 0 0 chr2 210334075 210334243 -40353611 + AluSq SINE Alu 136 303 -10 1646 178 20 7 chr2 210334517 210334815 -40353039 - AluJb SINE Alu -7 305 4 2347 77 0 0 chr2 210335031 210335352 -40352502 - AluSq SINE Alu 0 321 1 186 43 0 0 chr2 210335357 210335380 -40352474 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1811 121 18 7 chr2 210335385 210335658 -40352196 - AluSx SINE Alu -36 276 1 326 254 88 55 chr2 210335839 210336020 -40351834 + L1MC4 LINE L1 7572 7758 -284 1946 120 34 10 chr2 210336025 210336317 -40351537 - AluSx SINE Alu -11 301 3 364 167 17 0 chr2 210336317 210336377 -40351477 - AluS SINE Alu -241 61 1 1061 106 0 0 chr2 210337139 210337280 -40350574 - AluSq/x SINE Alu -171 141 1 2202 85 28 0 chr2 210337491 210337774 -40350080 - AluY SINE Alu -18 293 3 26 0 0 0 chr2 210337774 210337800 -40350054 + AT_rich Low_complexity Low_complexity 1 26 0 1921 89 16 0 chr2 210337820 210338066 -40349788 - L1PA5 LINE L1 0 6154 5905 26 0 0 0 chr2 210338336 210338362 -40349492 + AT_rich Low_complexity Low_complexity 1 26 0 1839 159 7 10 chr2 210338393 210338688 -40349166 - AluJb SINE Alu -18 294 1 409 143 57 14 chr2 210338688 210338758 -40349096 - AluJo/FLAM SINE Alu -202 110 38 24 0 0 0 chr2 210338826 210338850 -40349004 + AT_rich Low_complexity Low_complexity 1 24 0 644 270 0 0 chr2 210339490 210339616 -40348238 - FLAM_A SINE Alu -7 126 1 2197 129 3 0 chr2 210342138 210342441 -40345413 - AluSx SINE Alu -8 304 1 1844 138 3 60 chr2 210342621 210342939 -40344915 - AluSx SINE Alu -12 300 1 22 35 0 0 chr2 210343078 210343107 -40344747 + AT_rich Low_complexity Low_complexity 1 29 0 1757 157 115 28 chr2 210343710 210344066 -40343788 - MLT1B LTR MaLR 0 390 4 1652 148 6 61 chr2 210344277 210344588 -40343266 + AluJo SINE Alu 1 294 -18 2123 130 0 10 chr2 210344841 210345140 -40342714 + AluSg SINE Alu 1 296 -14 1108 292 89 70 chr2 210345192 210345370 -40342484 + L2 LINE L2 1615 1788 -1526 1784 168 7 3 chr2 210345370 210345661 -40342193 - AluJo SINE Alu -9 303 12 1108 292 89 70 chr2 210345661 210346270 -40341584 + L2 LINE L2 1788 2417 -897 580 157 0 0 chr2 210346288 210346371 -40341483 + AluS SINE Alu 2 84 -229 1246 157 9 23 chr2 210346709 210346925 -40340929 + AluJb SINE Alu 86 298 -14 2381 89 0 0 chr2 210347062 210347365 -40340489 + AluSg SINE Alu 1 303 -7 1092 190 62 44 chr2 210348358 210348455 -40339399 - AluJo SINE Alu -82 230 136 2284 92 3 3 chr2 210348455 210348750 -40339104 - AluSp SINE Alu -18 295 1 1092 190 62 44 chr2 210348750 210348878 -40338976 - AluJo SINE Alu -176 136 1 1559 142 0 0 chr2 210348926 210349151 -40338703 - AluSg/x SINE Alu -11 301 77 2170 128 0 7 chr2 210350240 210350545 -40337309 - AluSx SINE Alu -9 303 1 1792 155 16 7 chr2 210350755 210351059 -40336795 - AluJo SINE Alu -5 307 1 24 53 0 0 chr2 210351590 210351628 -40336226 + AT_rich Low_complexity Low_complexity 1 38 0 686 103 0 0 chr2 210351628 210351715 -40336139 - FLAM_C SINE Alu -25 118 32 23 0 0 0 chr2 210351768 210351791 -40336063 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 210351968 210351996 -40335858 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 210352090 210352120 -40335734 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 210352829 210352851 -40335003 + AT_rich Low_complexity Low_complexity 1 22 0 739 108 117 33 chr2 210352851 210352971 -40334883 - AluJb SINE Alu -181 131 2 24 32 0 0 chr2 210352975 210353006 -40334848 + AT_rich Low_complexity Low_complexity 1 31 0 197 279 73 29 chr2 210353184 210353252 -40334602 + L3b LINE CR1 1293 1363 -220 29 20 0 39 chr2 210353261 210353287 -40334567 + AT_rich Low_complexity Low_complexity 1 26 -23 2059 130 11 0 chr2 210353287 210353571 -40334283 - AluSx SINE Alu -25 287 1 29 20 0 39 chr2 210353571 210353595 -40334259 + AT_rich Low_complexity Low_complexity 26 49 0 598 115 0 0 chr2 210353595 210353673 -40334181 - AluJ/FLAM SINE Alu -234 78 1 769 175 8 8 chr2 210355332 210355458 -40332396 - FLAM_A SINE Alu -3 139 14 22 0 0 0 chr2 210355959 210355981 -40331873 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 210356248 210356272 -40331582 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 210357413 210357435 -40330419 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 210359905 210359933 -40327921 + AT_rich Low_complexity Low_complexity 1 28 0 2123 126 0 3 chr2 210360056 210360357 -40327497 - AluSx SINE Alu -12 300 1 703 105 0 129 chr2 210360578 210360702 -40327152 + FRAM SINE Alu 57 164 -12 1745 96 0 0 chr2 210361882 210362100 -40325754 + AluSg/x SINE Alu 78 295 -15 1468 60 0 11 chr2 210362615 210362800 -40325054 - L1PA8 LINE L1 0 6172 5990 305 315 48 79 chr2 210364107 210364272 -40323582 - L2 LINE L2 -10 3262 3103 2422 48 21 0 chr2 210364658 210364949 -40322905 + AluY SINE Alu 1 297 -14 1334 178 5 9 chr2 210366033 210366252 -40321602 - MER20 DNA MER1_type -1 218 1 276 305 158 12 chr2 210367648 210367755 -40320099 + MER5A DNA MER1_type 1 91 -98 2221 92 13 10 chr2 210367755 210368058 -40319796 + AluSp SINE Alu 1 304 -9 276 305 158 12 chr2 210368058 210368114 -40319740 + MER5A DNA MER1_type 91 188 -1 947 213 73 37 chr2 210368526 210368789 -40319065 + MIR SINE MIR 1 251 -11 811 164 0 16 chr2 210368826 210368948 -40318906 - FLAM_C SINE Alu -22 121 2 2157 119 0 7 chr2 210369246 210369539 -40318315 + AluSx SINE Alu 1 291 -21 1874 153 0 19 chr2 210369730 210370038 -40317816 - AluJb SINE Alu -10 302 1 867 156 0 8 chr2 210370042 210370170 -40317684 - FLAM_C SINE Alu -16 127 1 278 214 18 0 chr2 210370314 210370370 -40317484 - L2 LINE L2 0 3272 3216 252 319 25 34 chr2 210370654 210370773 -40317081 + L2 LINE L2 3196 3313 0 3186 112 7 9 chr2 210370812 210371241 -40316613 - MSTA LTR MaLR 0 428 1 1610 181 14 14 chr2 210372081 210372369 -40315485 - AluJo SINE Alu -24 288 1 1984 158 0 0 chr2 210372390 210372687 -40315167 - AluJb SINE Alu -14 298 2 406 255 13 7 chr2 210372900 210373016 -40314838 - MIR SINE MIR -46 216 101 2510 54 0 10 chr2 210373100 210373397 -40314457 - AluY SINE Alu -15 296 3 1823 139 7 14 chr2 210374229 210374517 -40313337 - AluJb SINE Alu -26 286 1 2427 65 0 23 chr2 210374912 210375222 -40312632 + AluY SINE Alu 9 311 0 273 159 0 0 chr2 210375453 210375516 -40312338 + (ATG)n Simple_repeat Simple_repeat 3 65 0 182 343 66 52 chr2 210376379 210376650 -40311204 + L2 LINE L2 2886 3160 -112 24 0 0 0 chr2 210377387 210377411 -40310443 + AT_rich Low_complexity Low_complexity 1 24 0 1674 119 8 0 chr2 210377415 210377651 -40310203 + AluSx SINE Alu 1 238 -74 2180 117 3 0 chr2 210378414 210378713 -40309141 - AluSq SINE Alu -13 300 1 1882 163 0 23 chr2 210378725 210379032 -40308822 - AluJb SINE Alu -12 300 1 193 314 35 47 chr2 210379226 210379312 -40308542 - MIR SINE MIR -73 135 51 286 333 68 0 chr2 210379613 210379745 -40308109 - MIR SINE MIR -32 230 90 232 370 11 0 chr2 210379830 210379922 -40307932 - MIR SINE MIR -168 94 2 1641 186 0 35 chr2 210379935 210380247 -40307607 - AluJo SINE Alu -11 301 1 418 203 126 44 chr2 210380332 210380514 -40307340 + MIR SINE MIR 16 212 -50 194 227 23 0 chr2 210381201 210381245 -40306609 - L2 LINE L2 -203 3069 3025 716 33 11 0 chr2 210381388 210381479 -40306375 + (GA)n Simple_repeat Simple_repeat 1 92 0 2105 106 0 3 chr2 210381554 210381837 -40306017 + AluSx SINE Alu 1 282 -30 1686 117 9 0 chr2 210381867 210382097 -40305757 + AluSx SINE Alu 5 236 -76 5700 144 28 8 chr2 210583529 210585051 -40102803 + L1MA5A LINE L1 4695 6247 -50 256 324 51 19 chr2 210585294 210585510 -40102344 + L1ME4a LINE L1 5586 5808 -313 919 248 17 34 chr2 210585531 210585769 -40102085 - MIR SINE MIR -11 251 18 231 216 95 43 chr2 210585776 210585892 -40101962 + L1ME4a LINE L1 5985 6106 -15 204 264 132 0 chr2 210586407 210586460 -40101394 - L2 LINE L2 0 3313 3254 221 219 24 0 chr2 210586478 210586519 -40101335 + MIR SINE MIR 41 82 -126 24 0 0 0 chr2 210587162 210587186 -40100668 + AT_rich Low_complexity Low_complexity 1 24 0 351 60 0 0 chr2 210587186 210587236 -40100618 + (GA)n Simple_repeat Simple_repeat 2 51 0 1991 90 41 0 chr2 210587237 210587503 -40100351 - AluSp SINE Alu -36 277 1 282 216 144 65 chr2 210588102 210588241 -40099613 + L2 LINE L2 3164 3313 0 286 316 103 17 chr2 210589568 210589685 -40098169 + MIR SINE MIR 28 154 -108 214 309 36 0 chr2 210590703 210590758 -40097096 - L2 LINE L2 -11 3261 3205 1988 156 31 44 chr2 210591095 210591551 -40096303 + L1MB8 LINE L1 5729 6178 0 1292 189 105 31 chr2 210593779 210594102 -40093752 + MLT1A1 LTR MaLR 19 365 0 184 315 102 31 chr2 210594129 210594256 -40093598 - MIR3 SINE MIR -59 149 14 202 376 37 12 chr2 210594689 210594851 -40093003 + L2 LINE L2 2731 2896 -418 182 277 43 21 chr2 210595312 210595359 -40092495 + L3 LINE CR1 1498 1545 -32 1676 136 130 27 chr2 210596105 210596435 -40091419 - THE1B LTR MaLR 0 364 1 242 360 54 0 chr2 210597615 210597726 -40090128 + MIR SINE MIR 31 147 -61 24 67 0 0 chr2 210598320 210598365 -40089489 + AT_rich Low_complexity Low_complexity 1 45 0 1733 164 16 35 chr2 210598511 210598822 -40089032 + AluJo SINE Alu 6 310 -2 886 245 103 41 chr2 210598965 210599332 -40088522 + LTR33A LTR ERVL 106 495 -28 341 302 101 50 chr2 210599338 210599477 -40088377 + MIR3 SINE MIR 30 175 -33 * 581 255 7 28 chr2 210599456 210599601 -40088253 + MER5B DNA MER1_type 37 178 0 437 172 13 108 chr2 210599614 210599771 -40088083 + Charlie1 DNA MER1_type 199 340 -2421 223 266 43 43 chr2 210600381 210600475 -40087379 - MER5A DNA MER1_type -84 105 12 5965 9 0 0 chr2 210600511 210601181 -40086673 - L1PA2 LINE L1 0 6155 5486 1368 12 0 0 chr2 210601181 210601349 -40086505 + L1PA2 LINE L1 5317 5484 -671 343 299 128 24 chr2 210602104 210602315 -40085539 - MIR SINE MIR -9 253 21 * 509 273 71 80 chr2 210602314 210602552 -40085302 + MIR SINE MIR 15 250 -12 24 0 0 0 chr2 210602671 210602695 -40085159 + AT_rich Low_complexity Low_complexity 1 24 0 325 278 90 0 chr2 210604847 210604980 -40082874 + MIR SINE MIR 118 262 0 306 0 0 0 chr2 210604999 210605033 -40082821 + (ATG)n Simple_repeat Simple_repeat 2 35 0 878 224 33 9 chr2 210606016 210606230 -40081624 - MER20 DNA MER1_type 0 219 1 1501 195 33 26 chr2 210606282 210606584 -40081270 + AluJo SINE Alu 1 304 -8 987 249 14 0 chr2 210606690 210606911 -40080943 + MIR SINE MIR 36 259 -3 523 308 118 5 chr2 210609407 210609618 -40078236 - MIR SINE MIR -26 236 2 305 325 122 55 chr2 210611166 210611403 -40076451 + L2 LINE L2 3020 3272 0 221 277 43 99 chr2 210612386 210612527 -40075327 - L2 LINE L2 -2 3311 3179 213 294 28 64 chr2 210612849 210612958 -40074896 - MIR SINE MIR -84 124 20 2081 138 7 0 chr2 210615179 210615477 -40072377 - AluSx SINE Alu -12 300 1 364 289 63 14 chr2 210615964 210616106 -40071748 + Charlie1 DNA MER1_type 2 150 -2611 * 5437 201 97 52 chr2 210616090 210616238 -40071616 + Charlie1 DNA MER1_type 455 595 -2166 3771 150 50 4 chr2 210616238 210616944 -40070910 + L1MB3 LINE L1 5446 6183 0 5437 201 97 52 chr2 210616944 210616972 -40070882 + Charlie1 DNA MER1_type 595 620 -2141 2208 101 3 7 chr2 210616972 210617268 -40070586 + AluSx SINE Alu 3 297 -15 5437 201 97 52 chr2 210617268 210618829 -40069025 + Charlie1 DNA MER1_type 620 2270 -491 1532 220 38 45 chr2 210618831 210619250 -40068604 + MLT1E LTR MaLR 131 546 -47 1681 164 85 30 chr2 210619256 210619727 -40068127 + Charlie1 DNA MER1_type 2264 2760 -1 2397 67 0 3 chr2 210620076 210620375 -40067479 + AluY SINE Alu 1 298 -13 1386 209 121 31 chr2 210620694 210620868 -40066986 + MLT1C LTR MaLR 1 158 -309 494 31 16 0 chr2 210620868 210620932 -40066922 + (GA)n Simple_repeat Simple_repeat 2 66 0 1386 209 121 31 chr2 210620932 210621179 -40066675 + MLT1C LTR MaLR 158 460 -7 25 31 0 0 chr2 210621307 210621339 -40066515 + AT_rich Low_complexity Low_complexity 1 32 0 358 262 128 0 chr2 210621904 210622053 -40065801 - MER112 DNA MER1_type -6 254 87 2415 76 0 3 chr2 210622253 210622555 -40065299 + AluSq SINE Alu 1 301 -12 428 243 211 5 chr2 210622582 210622800 -40065054 - LTR33 LTR ERVL -255 266 4 182 308 77 13 chr2 210623752 210623830 -40064024 + L2 LINE L2 3197 3279 -34 9103 60 8 0 chr2 210623954 210625896 -40061958 - L1PA6 LINE L1 -6 6148 4198 215 347 84 21 chr2 210626571 210626666 -40061188 - L2 LINE L2 -9 3263 3163 240 320 183 32 chr2 210626667 210627011 -40060843 - L2 LINE L2 -745 2569 2174 189 394 39 0 chr2 210627572 210627676 -40060178 + L2 LINE L2 2948 3055 -217 312 247 63 25 chr2 210627802 210627998 -40059856 + MLT1H1 LTR MaLR 313 555 0 901 308 87 32 chr2 210628025 210628486 -40059368 - L2 LINE L2 -2 3311 2826 2731 174 29 34 chr2 210628501 210628584 -40059270 - MER68 LTR ERV1 -7 555 473 2155 118 3 0 chr2 210628584 210628873 -40058981 - AluSx SINE Alu -22 290 1 2731 174 29 34 chr2 210628873 210629347 -40058507 - MER68 LTR ERV1 -89 473 1 1636 301 129 15 chr2 210629353 210630087 -40057767 - L2 LINE L2 -498 2816 1999 5287 106 4 4 chr2 210630100 210630439 -40057415 - L1PB1 LINE L1 0 6151 5813 855 127 0 0 chr2 210630439 210630589 -40057265 + (TA)n Simple_repeat Simple_repeat 1 150 0 216 0 0 0 chr2 210630588 210630612 -40057242 + (CA)n Simple_repeat Simple_repeat 2 25 0 * 5287 106 4 4 chr2 210630589 210631226 -40056628 - L1PB1 LINE L1 -337 5814 5159 1614 235 5 5 chr2 210631227 210631657 -40056197 + L1PB1 LINE L1 4730 5159 -987 819 191 112 0 chr2 210632054 210632242 -40055612 - MER3 DNA MER1_type 0 209 1 783 255 29 42 chr2 210632782 210633024 -40054830 - Charlie8 DNA MER1_type -2175 242 4 333 0 0 0 chr2 210633700 210633737 -40054117 + (CA)n Simple_repeat Simple_repeat 2 38 0 2210 144 30 3 chr2 210633737 210634070 -40053784 - MER2 DNA MER2_type -2 342 1 734 229 0 58 chr2 210634506 210634694 -40053160 + MER5B DNA MER1_type 2 178 0 696 209 167 19 chr2 210635605 210635815 -40052039 + MIR SINE MIR 12 252 -10 436 257 171 0 chr2 210637690 210637830 -40050024 - MER5A DNA MER1_type 0 189 26 321 226 145 40 chr2 210638341 210638465 -40049389 + L1MDb LINE L1 555 691 -5718 22 35 0 0 chr2 210638576 210638605 -40049249 + GC_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr2 210638705 210638734 -40049120 + GC_rich Low_complexity Low_complexity 1 29 0 194 269 11 75 chr2 210639120 210639213 -40048641 - MIR3 SINE MIR -2 206 120 264 276 100 23 chr2 210639413 210639597 -40048257 - MIR SINE MIR -46 216 17 22 0 0 0 chr2 210639759 210639781 -40048073 + AT_rich Low_complexity Low_complexity 1 22 0 535 304 5 33 chr2 210639878 210640092 -40047762 - MLT1K LTR MaLR -18 570 363 513 303 14 0 chr2 210640104 210640246 -40047608 - MIR SINE MIR -113 149 6 497 250 175 12 chr2 210642716 210642876 -40044978 - MIR3 SINE MIR -7 201 16 2031 152 0 0 chr2 210642945 210643242 -40044612 - AluSx SINE Alu -15 297 1 267 255 0 0 chr2 210643416 210643467 -40044387 - L2 LINE L2 -561 2753 2703 305 287 40 47 chr2 210643770 210643920 -40043934 - L2 LINE L2 -339 2974 2826 2430 99 0 0 chr2 210644088 210644400 -40043454 + AluSx SINE Alu 1 312 0 498 302 65 36 chr2 210644430 210644738 -40043116 - L2 LINE L2 -907 2407 2091 914 235 42 50 chr2 210645340 210645697 -40042157 - LTR33A LTR ERVL -1 522 169 442 175 21 21 chr2 210647408 210647505 -40040349 + AluJ/FRAM SINE Alu 216 312 0 4511 145 3 40 chr2 210647757 210648490 -40039364 + MER39 LTR ERV1 1 706 -1 707 296 93 55 chr2 210648535 210648934 -40038920 + LTR16A LTR ERVL 31 444 -6 2097 144 58 19 chr2 210649272 210649633 -40038221 - THE1C LTR MaLR 0 375 1 1595 159 33 36 chr2 210649963 210650264 -40037590 + AluJo SINE Alu 1 300 -12 423 297 54 0 chr2 210650313 210650424 -40037430 - L2 LINE L2 0 3313 3197 555 280 95 20 chr2 210651108 210651544 -40036310 - LTR33 LTR ERVL 0 521 1 1796 137 4 0 chr2 210651876 210652139 -40035715 + AluSq SINE Alu 1 264 -49 41 48 0 0 chr2 210652313 210652375 -40035479 + AT_rich Low_complexity Low_complexity 1 62 0 654 246 62 31 chr2 210653464 210653659 -40034195 + MIR SINE MIR 24 224 -38 952 274 62 47 chr2 210654763 210655164 -40032690 - LTR33 LTR ERVL -2 519 113 625 224 33 26 chr2 210655218 210655370 -40032484 + MIR SINE MIR 6 158 -104 2272 139 114 64 chr2 210655373 210655839 -40032015 - MLT1D LTR MaLR -16 489 1 235 279 29 48 chr2 210655841 210655945 -40031909 + MIR SINE MIR 161 262 0 2530 184 34 0 chr2 210656079 210656491 -40031363 + MSTB LTR MaLR 1 426 0 265 306 187 51 chr2 210656492 210657045 -40030809 - L2 LINE L2 -943 2371 1895 2163 114 0 0 chr2 210657045 210657356 -40030498 + AluSx SINE Alu 1 311 0 265 306 187 51 chr2 210657356 210657849 -40030005 - L2 LINE L2 -1419 1895 1181 2498 81 3 0 chr2 210658564 210658874 -40028980 + AluY SINE Alu 1 311 0 298 280 32 89 chr2 210659308 210659465 -40028389 + MIR SINE MIR 84 231 -31 271 254 0 0 chr2 210659522 210659585 -40028269 + MLT2E LTR ERVL 38 100 -528 246 319 25 62 chr2 210659653 210659767 -40028087 + MLT2E LTR ERVL 377 485 -143 2688 178 34 53 chr2 210659767 210660291 -40027563 + MLT2B2 LTR ERVL 2 515 0 246 319 25 62 chr2 210660291 210660336 -40027518 + MLT2E LTR ERVL 485 530 -98 292 284 74 40 chr2 210661114 210661262 -40026592 - MIR SINE MIR -1 261 109 235 243 204 53 chr2 210661262 210661488 -40026366 - LTR33 LTR ERVL -139 382 123 403 295 11 0 chr2 210661559 210661654 -40026200 - MIR SINE MIR -116 146 51 216 273 39 0 chr2 210662106 210662183 -40025671 - MIR SINE MIR -61 201 122 205 386 10 20 chr2 210662216 210662317 -40025537 - MIR SINE MIR -88 120 21 204 324 162 0 chr2 210662689 210662794 -40025060 + L2 LINE L2 3151 3272 0 1447 271 46 25 chr2 210663133 210663565 -40024289 + LTR33 LTR ERVL 81 521 0 2364 92 0 0 chr2 210665632 210665938 -40021916 + AluY SINE Alu 1 306 -5 270 0 0 0 chr2 210666020 210666050 -40021804 + (TG)n Simple_repeat Simple_repeat 2 31 0 2318 148 27 68 chr2 210666052 210666447 -40021407 - MSTB LTR MaLR -5 421 44 3932 82 11 15 chr2 210666447 210666970 -40020884 - L1PA11 LINE L1 -2 6172 5652 2318 148 27 68 chr2 210666970 210667013 -40020841 - MSTB LTR MaLR -382 44 1 745 271 48 48 chr2 210667018 210667315 -40020539 - L1MC4 LINE L1 -146 7896 7490 592 308 115 22 chr2 210667457 210667821 -40020033 + LTR16C LTR ERVL 90 487 -4 344 271 24 0 chr2 210667822 210667907 -40019947 - MIR SINE MIR -164 98 12 184 254 16 48 chr2 210667943 210668006 -40019848 - MIR SINE MIR -153 109 49 212 302 188 0 chr2 210668186 210668282 -40019572 - L2 LINE L2 -10 3303 3190 261 0 0 0 chr2 210668330 210668359 -40019495 + (CA)n Simple_repeat Simple_repeat 2 30 0 338 307 158 0 chr2 210668440 210668554 -40019300 + L2 LINE L2 3107 3238 -34 508 306 83 5 chr2 210668581 210668774 -40019080 - MIR SINE MIR -35 227 20 210 91 0 0 chr2 210668979 210669012 -40018842 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 184 197 211 42 chr2 210669234 210669305 -40018549 + MIR3 SINE MIR 103 185 -23 252 59 0 0 chr2 210669346 210669380 -40018474 + (TG)n Simple_repeat Simple_repeat 1 34 0 801 184 35 7 chr2 210669496 210669637 -40018217 + MER58A DNA MER1_type 49 193 -31 271 290 40 30 chr2 210669684 210669784 -40018070 + MIR SINE MIR 53 153 -109 609 233 0 67 chr2 210669865 210670045 -40017809 - MLT1H LTR MaLR 0 549 382 299 231 0 0 chr2 210670246 210670311 -40017543 - MLT1H LTR MaLR -472 77 13 916 278 86 44 chr2 210670340 210670886 -40016968 + L1ME4a LINE L1 5536 6104 -17 611 256 5 41 chr2 210671951 210672146 -40015708 + L1ME3A LINE L1 5761 5948 -222 21 0 0 0 chr2 210672425 210672446 -40015408 + AT_rich Low_complexity Low_complexity 1 21 0 214 294 0 0 chr2 210673525 210673576 -40014278 + MIR SINE MIR 110 160 -102 2878 80 3 8 chr2 210673580 210673957 -40013897 + L1PB1 LINE L1 5777 6151 0 777 83 8 25 chr2 210673972 210674093 -40013761 - L1MA3 LINE L1 -276 6029 5911 2867 6 0 3 chr2 210674219 210674531 -40013323 + AluYa5 SINE Alu 1 311 0 663 269 70 0 chr2 210675177 210675363 -40012491 - MIR SINE MIR -18 244 46 1489 223 173 15 chr2 210675424 210675899 -40011955 + MLT1F1 LTR MaLR 5 554 -13 644 303 125 42 chr2 210676072 210676115 -40011739 + L3 LINE CR1 920 958 -619 270 106 0 0 chr2 210676115 210676162 -40011692 + (CA)n Simple_repeat Simple_repeat 2 48 0 644 303 125 42 chr2 210676162 210676518 -40011336 + L3 LINE CR1 958 1352 -225 1909 136 0 33 chr2 210676911 210677212 -40010642 - AluJo SINE Alu -21 291 1 353 269 18 14 chr2 210677720 210677899 -40009955 - L1P5 LINE L1 -709 5442 5256 334 281 113 52 chr2 210677959 210678190 -40009664 - Charlie7 DNA MER1_type -2361 251 7 1374 156 113 11 chr2 210679190 210679472 -40008382 - L1MC2 LINE L1 0 6344 6034 268 284 74 0 chr2 210680194 210680275 -40007579 - L2 LINE L2 0 3272 3186 216 221 176 15 chr2 210680381 210680449 -40007405 - MIR3 SINE MIR -115 93 15 243 330 18 0 chr2 210682215 210682327 -40005527 + LTR16C LTR ERVL 89 202 -289 951 317 67 9 chr2 210682349 210682781 -40005073 - LTR16B LTR ERVL 0 464 8 783 225 122 9 chr2 210682814 210683027 -40004827 + LTR16C LTR ERVL 255 491 0 1033 179 144 46 chr2 210684064 210684349 -40003505 + MER2 DNA MER2_type 28 340 -5 2223 128 0 3 chr2 210684398 210684702 -40003152 + AluSx SINE Alu 1 303 -9 778 271 57 0 chr2 210684844 210685088 -40002766 - MIR SINE MIR -2 260 3 903 236 28 0 chr2 210685089 210685271 -40002583 + MER5A DNA MER1_type 1 187 -2 446 265 20 0 chr2 210686831 210686933 -40000921 - MER91B DNA MER1_type 0 190 87 292 273 61 76 chr2 210686947 210687079 -40000775 - MER91B DNA MER1_type -60 130 1 262 176 20 0 chr2 210687331 210687382 -40000472 + MER81 DNA DNA 63 114 0 254 356 82 7 chr2 210688458 210688604 -39999250 + MIR SINE MIR 26 182 -80 392 308 154 0 chr2 210688958 210689114 -39998740 - MER5A DNA MER1_type -1 188 9 518 289 17 33 chr2 210689127 210689307 -39998547 - MER5B DNA MER1_type -1 177 1 195 345 87 68 chr2 210689307 210689512 -39998342 - L2 LINE L2 -259 3013 2805 2389 143 42 9 chr2 210689545 210689999 -39997855 - L1MB4 LINE L1 -6 6174 5706 496 337 17 35 chr2 210690007 210690179 -39997675 + MER5B DNA MER1_type 10 178 0 249 310 50 50 chr2 210690254 210690354 -39997500 - MER5A DNA MER1_type -20 169 70 1788 145 58 36 chr2 210690365 210690730 -39997124 + THE1C LTR MaLR 3 375 0 315 323 15 15 chr2 210692201 210692334 -39995520 + L3 LINE CR1 1145 1277 -300 27 0 0 0 chr2 210692638 210692665 -39995189 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr2 210692862 210692884 -39994970 + AT_rich Low_complexity Low_complexity 1 22 0 213 273 0 0 chr2 210693546 210693590 -39994264 - MIR SINE MIR 0 262 219 705 239 83 43 chr2 210693616 210693833 -39994021 - MIR SINE MIR -22 240 15 246 57 0 0 chr2 210695173 210695208 -39992646 + HSMAR1 DNA Mariner 2 36 -1251 1032 259 17 0 chr2 210695801 210696033 -39991821 - MIR SINE MIR -26 236 1 320 348 57 51 chr2 210696176 210696630 -39991224 + L1MC4a LINE L1 5327 5783 -338 209 222 14 28 chr2 210698446 210698518 -39989336 + GA-rich Low_complexity Low_complexity 3 73 0 4115 78 13 2 chr2 210698542 210699090 -39988764 - MER41A LTR ERV1 0 554 1 439 165 18 18 chr2 210699564 210699673 -39988181 + (TATATG)n Simple_repeat Simple_repeat 4 112 0 2197 285 125 34 chr2 210701214 210702589 -39985265 - L2 LINE L2 -42 3271 1698 570 299 49 17 chr2 210702610 210702898 -39984956 + L1MC4a LINE L1 5750 6046 -1762 399 314 164 49 chr2 210703048 210703522 -39984332 - L2 LINE L2 -1656 1658 1240 3296 108 87 59 chr2 210703522 210704168 -39983686 - MER4A LTR ERV1 0 664 1 399 314 164 49 chr2 210704168 210704947 -39982907 - L2 LINE L2 -2074 1240 261 1013 189 0 0 chr2 210705813 210705982 -39981872 + FRAM SINE Alu 1 164 -12 2403 55 0 52 chr2 210706797 210707123 -39980731 - AluY SINE Alu -2 309 1 438 291 72 42 chr2 210708967 210709273 -39978581 - MER102a DNA MER1_type 0 330 16 625 231 38 24 chr2 210710004 210710216 -39977638 + LTR16C LTR ERVL 277 491 0 249 83 0 0 chr2 210711045 210711081 -39976773 + (TG)n Simple_repeat Simple_repeat 1 36 0 807 178 28 44 chr2 210711409 210711589 -39976265 - MER20 DNA MER1_type -4 215 39 207 100 0 0 chr2 210711589 210711619 -39976235 + (TG)n Simple_repeat Simple_repeat 2 31 0 917 257 32 48 chr2 210711839 210712088 -39975766 - MIR SINE MIR -16 246 2 200 161 0 0 chr2 210712621 210712652 -39975202 - MIR SINE MIR -113 149 119 458 249 262 36 chr2 210715982 210716367 -39971487 + LTR33 LTR ERVL 44 515 -6 231 114 0 0 chr2 210716385 210716420 -39971434 + (TC)n Simple_repeat Simple_repeat 2 36 0 843 122 0 0 chr2 210716438 210716569 -39971285 + (TCCCC)n Simple_repeat Simple_repeat 2 132 0 315 67 0 0 chr2 210717088 210717133 -39970721 - AluY SINE Alu -3 305 261 1510 94 0 0 chr2 210717133 210717325 -39970529 - AluY SINE Alu -119 192 1 6836 64 5 9 chr2 210718105 210719614 -39968240 - L1PA7 LINE L1 -13 6141 4633 1173 36 0 0 chr2 210719615 210719755 -39968099 + AluY SINE Alu 172 311 0 2028 86 3 0 chr2 210719764 210720068 -39967786 - L1PA7 LINE L1 -1512 4634 4330 * 19132 82 7 6 chr2 210720060 210722885 -39964969 + L1PA7 LINE L1 1485 4313 -1833 23 0 0 0 chr2 210723157 210723180 -39964674 + AT_rich Low_complexity Low_complexity 1 23 0 2081 120 0 0 chr2 210723189 210723464 -39964390 - AluSx SINE Alu -37 275 1 567 311 18 40 chr2 210723709 210723986 -39963868 + MLT1K LTR MaLR 313 583 -5 24 0 0 0 chr2 210724086 210724110 -39963744 + AT_rich Low_complexity Low_complexity 1 24 0 396 0 0 0 chr2 210724621 210724665 -39963189 + (GA)n Simple_repeat Simple_repeat 1 44 0 668 247 49 21 chr2 210724927 210725327 -39962527 + LTR33 LTR ERVL 45 519 -2 2149 68 57 7 chr2 210725849 210726150 -39961704 + AluSc SINE Alu 1 309 0 189 0 0 0 chr2 210726150 210726171 -39961683 + (TA)n Simple_repeat Simple_repeat 1 21 0 226 257 62 75 chr2 210726208 210726434 -39961420 - L1MC4 LINE L1 0 8042 7820 1601 217 4 0 chr2 210726883 210727164 -39960690 + AluJo SINE Alu 1 282 -30 543 181 80 14 chr2 210727843 210727981 -39959873 + LTR33A LTR ERVL 371 517 -6 191 302 151 0 chr2 210728034 210728140 -39959714 - L2 LINE L2 -91 3222 3101 302 324 116 6 chr2 210728289 210728462 -39959392 - L2 LINE L2 -21 3292 3101 438 284 21 28 chr2 210728496 210728637 -39959217 + MIR3 SINE MIR 2 141 -67 208 159 114 0 chr2 210728691 210728735 -39959119 - L2 LINE L2 -2 3270 3222 240 111 0 0 chr2 210728839 210728875 -39958979 + (CA)n Simple_repeat Simple_repeat 2 37 0 187 283 17 17 chr2 210729480 210729540 -39958314 - L2 LINE L2 -31 3241 3182 1524 176 84 25 chr2 210730688 210731081 -39956773 - Charlie1 DNA MER1_type -3 2758 2343 833 276 92 10 chr2 210731145 210731439 -39956415 - MLT1J LTR MaLR -193 318 1 753 255 106 17 chr2 210731936 210732171 -39955683 - MIR SINE MIR -4 258 3 280 116 0 0 chr2 210732834 210732877 -39954977 + MER102a DNA MER1_type 284 326 -4 1036 277 28 13 chr2 210733278 210733675 -39954179 + MLT1I LTR MaLR 7 409 0 183 299 75 0 chr2 210734691 210734758 -39953096 + L2 LINE L2 3186 3257 -15 261 278 174 0 chr2 210734943 210735058 -39952796 + MIR SINE MIR 18 152 -56 3209 227 54 13 chr2 210735145 210735302 -39952552 - L1M4 LINE L1 -3156 3488 3339 1680 184 10 10 chr2 210735302 210735606 -39952248 - AluJo SINE Alu -8 304 1 3209 227 54 13 chr2 210735606 210736530 -39951324 - L1M4 LINE L1 -3305 3339 2345 6948 64 7 0 chr2 210736530 210738280 -39949574 + L1PA7 LINE L1 4432 6150 -4 3209 227 54 13 chr2 210738280 210738440 -39949414 - L1M4 LINE L1 -4299 2345 2193 2438 203 95 58 chr2 210738446 210739601 -39948253 - L1M4 LINE L1 -4699 1947 631 3573 218 40 11 chr2 210739616 210740356 -39947498 - MER45B DNA AcHobo -276 764 3 1686 143 0 7 chr2 210740489 210740783 -39947071 - L1MA8 LINE L1 -4 6287 5996 473 311 6 17 chr2 210740784 210740964 -39946890 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 302 300 102 68 chr2 210740967 210741350 -39946504 + MLT1J LTR MaLR 110 505 -6 361 269 90 42 chr2 210741372 210741914 -39945940 - L1M4 LINE L1 -1276 4870 4303 1740 165 152 57 chr2 210743485 210743927 -39943927 - MLT1D LTR MaLR 0 505 22 584 294 149 9 chr2 210743958 210744179 -39943675 - MIR SINE MIR 0 262 11 618 286 34 68 chr2 210744613 210744936 -39942918 + MLT1G1 LTR MaLR 2 357 -238 234 254 0 15 chr2 210744998 210745065 -39942789 + MLT1G1 LTR MaLR 530 595 0 542 233 7 180 chr2 210746855 210746952 -39940902 - MIR SINE MIR -27 235 123 1638 186 7 10 chr2 210746952 210747242 -39940612 - AluJo SINE Alu -23 289 1 542 233 7 180 chr2 210747242 210747329 -39940525 - MIR SINE MIR -139 123 114 709 92 22 201 chr2 210747329 210747558 -39940296 + MER53 DNA DNA 1 188 -1 542 233 7 180 chr2 210747558 210747655 -39940199 - MIR SINE MIR -148 114 2 1048 229 129 24 chr2 210749528 210749925 -39937929 - MLT1C LTR MaLR 0 467 19 236 274 11 42 chr2 210750245 210750340 -39937514 - MER94 DNA DNA -4 130 39 2734 207 18 51 chr2 210750738 210751448 -39936406 + L1 LINE L1 1245 1931 -4918 * 4485 168 13 62 chr2 210751433 210751882 -39935972 + L1 LINE L1 4215 4684 -2164 2217 97 0 0 chr2 210751882 210752171 -39935683 + AluY SINE Alu 1 289 -22 4485 168 13 62 chr2 210752171 210752502 -39935352 + L1 LINE L1 4684 4934 -1914 1521 186 29 42 chr2 210752502 210752814 -39935040 + AluJo SINE Alu 1 308 -4 4485 168 13 62 chr2 210752814 210753082 -39934772 + L1 LINE L1 4934 5213 -1635 186 43 0 0 chr2 210753113 210753136 -39934718 + (CAAT)n Simple_repeat Simple_repeat 4 26 0 1727 65 32 32 chr2 210753136 210753340 -39934514 + L1P LINE L1 4034 4240 -1906 2240 116 0 3 chr2 210753340 210753642 -39934212 + AluSq SINE Alu 1 301 -12 1727 65 32 32 chr2 210753642 210753684 -39934170 + L1P LINE L1 4239 4280 -1866 366 256 85 47 chr2 210753691 210753820 -39934034 - MIR SINE MIR -109 153 20 777 253 96 1 chr2 210754238 210754490 -39933364 + L1ME LINE L1 5543 5821 -359 612 315 95 44 chr2 210754510 210755055 -39932799 - L2 LINE L2 -183 3130 2554 21 0 0 0 chr2 210755824 210755845 -39932009 + AT_rich Low_complexity Low_complexity 1 21 0 1320 96 29 10 chr2 210757050 210757258 -39930596 - L1PA16 LINE L1 -4 6162 5951 23359 20 0 0 chr2 210758197 210761739 -39926115 + L1HS LINE L1 2614 6155 0 192 77 0 0 chr2 210761757 210761783 -39926071 + (A)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr2 210762713 210762741 -39925113 + AT_rich Low_complexity Low_complexity 1 28 0 246 359 136 0 chr2 210763215 210763318 -39924536 - MIR SINE MIR -56 152 36 808 190 56 6 chr2 210763372 210763551 -39924303 - MER5A DNA MER1_type -1 188 1 258 32 0 0 chr2 210763994 210764025 -39923829 + (CA)n Simple_repeat Simple_repeat 2 32 0 3459 123 22 41 chr2 210764192 210764747 -39923107 + MER61E LTR ERV1 1 544 -25 2511 74 3 0 chr2 210765678 210765988 -39921866 + AluSp SINE Alu 1 311 -2 1949 131 25 38 chr2 210766314 210766628 -39921226 + AluSg SINE Alu 1 310 0 21 0 0 0 chr2 210766883 210766904 -39920950 + AT_rich Low_complexity Low_complexity 1 21 0 543 298 43 24 chr2 210767589 210767797 -39920057 + MIR SINE MIR 49 260 -2 474 248 40 20 chr2 210768935 210769084 -39918770 + L1ME LINE L1 5498 5649 -472 227 254 16 0 chr2 210769130 210769193 -39918661 + L1ME LINE L1 5743 5806 -315 426 239 102 36 chr2 210770061 210770228 -39917626 - MER5B DNA MER1_type 0 178 1 250 264 88 33 chr2 210770500 210770591 -39917263 + MLT1H LTR MaLR 217 312 -283 382 196 100 26 chr2 210770670 210770782 -39917072 + MLT1H LTR MaLR 431 555 0 24 32 0 0 chr2 210771016 210771047 -39916807 + AT_rich Low_complexity Low_complexity 1 31 0 5078 132 24 4 chr2 210771134 210771960 -39915894 + L1PA16 LINE L1 5304 6146 -20 363 306 99 8 chr2 210772927 210773048 -39914806 + L2 LINE L2 3182 3313 0 449 344 52 5 chr2 210773812 210774024 -39913830 + MLT1J LTR MaLR 1 222 -289 899 297 27 8 chr2 210774141 210774397 -39913457 - MIR SINE MIR 0 262 2 186 71 0 0 chr2 210774817 210774845 -39913009 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 709 189 8 0 chr2 210774845 210774967 -39912887 - FLAM_C SINE Alu -20 123 1 598 294 6 12 chr2 210775018 210775178 -39912676 - MIR3 SINE MIR -7 201 43 365 307 182 10 chr2 210776365 210776557 -39911297 - MIR SINE MIR -20 242 18 361 186 24 195 chr2 210777276 210777486 -39910368 + MER69A DNA AcHobo 2 175 -2 540 45 0 0 chr2 210778081 210778148 -39909706 + (TATG)n Simple_repeat Simple_repeat 2 68 0 1645 173 0 10 chr2 210778148 210778437 -39909417 - AluJb SINE Alu -26 286 1 856 193 27 16 chr2 210779978 210780165 -39907689 + MER5A DNA MER1_type 1 189 0 29 0 0 0 chr2 210780660 210780689 -39907165 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 210780913 210780934 -39906920 + AT_rich Low_complexity Low_complexity 1 21 0 3680 55 11 2 chr2 210780962 210781438 -39906416 - L1PA5 LINE L1 -1308 4838 4359 7446 32 6 1 chr2 210781438 210782755 -39905099 + L1PA5 LINE L1 4832 6152 -2 283 343 75 71 chr2 210782892 210783035 -39904819 + MIR SINE MIR 8 154 -108 2109 139 0 0 chr2 210783035 210783330 -39904524 + AluSx SINE Alu 1 295 -17 283 343 75 71 chr2 210783330 210783440 -39904414 + MIR SINE MIR 154 262 0 196 329 175 33 chr2 210783484 210783815 -39904039 + L2 LINE L2 730 1107 -2207 195 303 58 58 chr2 210784099 210784287 -39903567 + L2 LINE L2 1527 1714 -1600 201 255 0 20 chr2 210785553 210785604 -39902250 - L2 LINE L2 -1 3271 3222 861 208 39 0 chr2 210786625 210786803 -39901051 - MER5A DNA MER1_type 0 189 5 1829 233 10 20 chr2 210787932 210788331 -39899523 + MLT1G LTR MaLR 196 590 0 1749 148 6 52 chr2 210788416 210788741 -39899113 + AluSx SINE Alu 1 310 -2 1501 154 47 36 chr2 210788986 210789265 -39898589 + AluJo SINE Alu 1 282 -30 23 0 0 0 chr2 210789267 210789290 -39898564 + AT_rich Low_complexity Low_complexity 1 23 0 412 228 158 16 chr2 210789704 210789831 -39898023 + MLT1E2 LTR MaLR 6 150 -504 * 1214 249 172 7 chr2 210789830 210790272 -39897582 + MLT1E2 LTR MaLR 111 625 -1 5046 170 29 14 chr2 210790327 210791478 -39896376 + L1PB3 LINE L1 4310 5491 -663 1856 98 30 82 chr2 210791478 210791783 -39896071 + AluSp SINE Alu 5 293 -20 5046 170 29 14 chr2 210791783 210792456 -39895398 + L1PB3 LINE L1 5491 6152 -2 425 267 117 65 chr2 210792799 210793368 -39894486 - L1MC4 LINE L1 -29 8013 7311 365 292 79 6 chr2 210793588 210793766 -39894088 - L1MC4 LINE L1 -774 7268 7078 3056 240 82 43 chr2 210793831 210795495 -39892359 - L1ME1 LINE L1 -7 6159 4374 536 244 51 15 chr2 210795518 210795715 -39892139 - L1MC4 LINE L1 -985 7057 6854 1020 50 0 0 chr2 210796111 210796230 -39891624 + AluY SINE Alu 178 296 -15 204 40 0 0 chr2 210798139 210798164 -39889690 + (T)n Simple_repeat Simple_repeat 1 25 0 2087 119 20 13 chr2 210798369 210798672 -39889182 + AluSq SINE Alu 1 305 -8 426 20 0 0 chr2 210798702 210798753 -39889101 + (TG)n Simple_repeat Simple_repeat 2 52 0 23 54 0 0 chr2 210798881 210798918 -39888936 + AT_rich Low_complexity Low_complexity 1 37 0 224 287 123 25 chr2 210799943 210800065 -39887789 + MIR SINE MIR 16 149 -59 3907 167 14 17 chr2 210800520 210801244 -39886610 + MER72 LTR ERV1 1 722 0 218 136 23 23 chr2 210801501 210801545 -39886309 + (CAAA)n Simple_repeat Simple_repeat 4 47 0 21 0 0 0 chr2 210807064 210807085 -39880769 + AT_rich Low_complexity Low_complexity 1 21 0 440 258 25 31 chr2 210807525 210807684 -39880170 + MLT1J LTR MaLR 4 161 -350 203 147 59 0 chr2 210807684 210807718 -39880136 - MER5A DNA MER1_type -77 112 77 337 233 39 19 chr2 210807886 210807989 -39879865 + MLT1J LTR MaLR 389 493 -18 1919 153 65 6 chr2 210810118 210810472 -39877382 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 210811450 210811471 -39876383 + AT_rich Low_complexity Low_complexity 1 21 0 436 110 0 121 chr2 210811790 210811816 -39876038 + MADE1 DNA Mariner 1 29 -51 2498 60 0 0 chr2 210811816 210812114 -39875740 + AluY SINE Alu 1 298 -13 436 110 0 121 chr2 210812114 210812178 -39875676 + MADE1 DNA Mariner 29 80 0 469 233 253 14 chr2 210812333 210812479 -39875375 - MER5A DNA MER1_type 0 189 9 259 213 107 27 chr2 210814207 210814282 -39873572 - MLT1K LTR MaLR -7 581 501 1372 256 87 13 chr2 210814454 210814923 -39872931 + L1MC4 LINE L1 6379 6882 -1160 1979 167 40 26 chr2 210814924 210815344 -39872510 + L1MB3 LINE L1 5750 6175 -8 389 174 93 0 chr2 210815351 210815437 -39872417 - L1MB3 LINE L1 -1 6182 6089 276 280 40 57 chr2 210815618 210815793 -39872061 + L1ME4a LINE L1 5736 5907 -263 2205 117 0 10 chr2 210816100 210816407 -39871447 - AluSg SINE Alu -6 304 1 512 300 23 0 chr2 210816759 210816889 -39870965 + MIR SINE MIR 24 156 -106 2152 130 0 7 chr2 210816890 210817197 -39870657 + AluSx SINE Alu 1 305 -7 314 182 52 0 chr2 210817209 210817286 -39870568 - L1MD1 LINE L1 -11 6231 6151 21 0 0 0 chr2 210817684 210817705 -39870149 + AT_rich Low_complexity Low_complexity 1 21 0 693 126 8 17 chr2 210820452 210820571 -39867283 + FLAM_C SINE Alu 24 141 -2 24 0 0 0 chr2 210820923 210820947 -39866907 + AT_rich Low_complexity Low_complexity 1 24 0 696 271 132 4 chr2 210821754 210822035 -39865819 + MER46C DNA MER2_type 1 317 -21 2081 95 0 0 chr2 210822341 210822614 -39865240 - AluY SINE Alu 0 311 39 191 333 0 0 chr2 210822745 210822796 -39865058 - L2 LINE L2 0 3272 3222 581 309 74 51 chr2 210823227 210823538 -39864316 + L2 LINE L2 2974 3291 -22 681 137 48 0 chr2 210824534 210824658 -39863196 + L1MB3 LINE L1 6046 6175 -8 709 299 21 21 chr2 210825492 210825733 -39862121 + MIR SINE MIR 8 248 -14 5227 139 24 3 chr2 210825821 210825862 -39861992 + L1PA16 LINE L1 5277 5316 -850 2075 137 7 3 chr2 210825862 210826169 -39861685 + AluSx SINE Alu 1 308 -4 5227 139 24 3 chr2 210826169 210826999 -39860855 + L1PA16 LINE L1 5316 6166 0 360 287 69 43 chr2 210827661 210827849 -39860005 + L1ME4a LINE L1 5918 6110 -11 297 226 57 57 chr2 210830793 210830899 -39856955 - MLT1L LTR MaLR -337 278 173 471 294 166 31 chr2 210831112 210831438 -39856416 - L3 LINE CR1 -16 1561 1192 180 152 0 0 chr2 210833923 210833956 -39853898 + (CATA)n Simple_repeat Simple_repeat 1 33 0 274 356 9 17 chr2 210834631 210834746 -39853108 - MIR SINE MIR -69 193 80 454 232 87 22 chr2 210834751 210834889 -39852965 - L2 LINE L2 -1 3312 3166 490 285 190 5 chr2 210835179 210835379 -39852475 - MIR SINE MIR -17 245 9 22 35 0 0 chr2 210835558 210835587 -39852267 + AT_rich Low_complexity Low_complexity 1 29 0 210 365 0 29 chr2 210835817 210835921 -39851933 + MIR3 SINE MIR 108 208 0 23 0 0 0 chr2 210836382 210836405 -39851449 + AT_rich Low_complexity Low_complexity 1 23 0 486 296 86 16 chr2 210837056 210837242 -39850612 - MIR SINE MIR -2 260 62 2180 190 70 13 chr2 210837969 210838443 -39849411 - MLT1D LTR MaLR 0 505 5 409 298 41 42 chr2 210838900 210839142 -39848712 + MIR SINE MIR 18 262 0 1986 133 0 19 chr2 210840126 210840435 -39847419 - AluSg SINE Alu -2 308 6 248 343 22 36 chr2 210841187 210841324 -39846530 - L2 LINE L2 0 3313 3179 495 262 111 29 chr2 210846272 210846444 -39841410 - MIR SINE MIR -19 243 58 182 297 47 0 chr2 210847415 210847479 -39840375 + MIR3 SINE MIR 135 201 -7 1888 267 131 47 chr2 210847479 210848972 -39838882 + L1ME3A LINE L1 2312 3929 -2217 326 217 185 16 chr2 210849055 210849239 -39838615 + L1ME3A LINE L1 4359 4573 -1573 1599 228 49 82 chr2 210849252 210849849 -39838005 + L1ME3A LINE L1 5494 6070 -100 1985 195 110 78 chr2 210849850 210850649 -39837205 + LTR1B LTR ERV1 2 826 0 641 288 77 45 chr2 210850971 210851284 -39836570 + L3 LINE CR1 902 1224 -353 433 328 144 30 chr2 210851651 210851770 -39836084 + L3 LINE CR1 1261 1365 -212 2498 76 0 0 chr2 210851770 210852071 -39835783 + AluSg SINE Alu 1 301 -9 433 328 144 30 chr2 210852071 210852222 -39835632 + L3 LINE CR1 1365 1562 -15 21 36 0 0 chr2 210853393 210853421 -39834433 + AT_rich Low_complexity Low_complexity 1 28 0 288 254 22 65 chr2 210854494 210854632 -39833222 + L2 LINE L2 3124 3255 -58 540 234 42 75 chr2 210854919 210855133 -39832721 - L2 LINE L2 -105 3208 3002 236 176 0 39 chr2 210855714 210855765 -39832089 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 196 412 12 0 chr2 210855795 210855880 -39831974 + L2 LINE L2 3167 3252 -20 350 287 37 9 chr2 210856098 210856206 -39831648 + MER5C DNA MER1_type 10 120 -204 336 190 89 0 chr2 210856232 210856311 -39831543 + MER5C DNA MER1_type 233 318 -6 24 0 0 0 chr2 210856979 210857003 -39830851 + AT_rich Low_complexity Low_complexity 1 24 0 366 301 146 73 chr2 210857156 210857512 -39830342 + HAL1 LINE L1 161 542 -1965 969 248 103 97 chr2 210857578 210858381 -39829473 + HAL1 LINE L1 1668 2475 -32 503 233 11 3 chr2 210858381 210858555 -39829299 + MER58A DNA MER1_type 4 223 -1 313 300 67 0 chr2 210858628 210858748 -39829106 - HAL1 LINE L1 -110 2397 2270 368 349 41 24 chr2 210858884 210859053 -39828801 - HAL1b LINE L1 -440 908 737 1357 221 102 54 chr2 210859554 210860034 -39827820 - MLT1D LTR MaLR -2 503 1 396 324 29 49 chr2 210861098 210861404 -39826450 - L2 LINE L2 -880 2434 2135 350 296 56 0 chr2 210861434 210861542 -39826312 - L2 LINE L2 -11 3261 3148 701 308 153 24 chr2 210861740 210862275 -39825579 + L2 LINE L2 2070 2673 -641 349 358 33 0 chr2 210863063 210863183 -39824671 - MIR3 SINE MIR -54 154 31 219 114 0 0 chr2 210863604 210863639 -39824215 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr2 210864928 210864956 -39822898 + AT_rich Low_complexity Low_complexity 1 28 0 273 287 49 63 chr2 210865006 210865149 -39822705 - MIR SINE MIR -75 187 47 6308 188 64 10 chr2 210865810 210867190 -39820664 + Charlie1a DNA MER1_type 1 1454 -1 185 265 0 20 chr2 210868277 210868326 -39819528 + L2 LINE L2 3248 3295 -18 243 290 29 87 chr2 210869065 210869203 -39818651 + Charlie8 DNA MER1_type 90 219 -2198 183 297 27 40 chr2 210870708 210870782 -39817072 + L2 LINE L2 3186 3258 -14 1519 186 66 4 chr2 210871222 210871496 -39816358 - AluJo SINE Alu -21 291 1 261 0 0 0 chr2 210872347 210872376 -39815478 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1606 256 71 58 chr2 210872468 210872988 -39814866 + MLT1H LTR MaLR 5 531 -18 2304 97 17 0 chr2 210874929 210875229 -39812625 - AluSx SINE Alu -7 305 1 5639 111 25 24 chr2 210875446 210875673 -39812181 - L1PA13 LINE L1 0 6163 5938 1875 151 133 21 chr2 210875673 210876058 -39811796 + MSTA LTR MaLR 1 428 0 9199 130 33 40 chr2 210876060 210877649 -39810205 + MSTA-int LTR MaLR 3 1580 0 1776 179 125 13 chr2 210877649 210878034 -39809820 + MSTA LTR MaLR 1 428 0 5639 111 25 24 chr2 210878034 210879211 -39808643 - L1PA13 LINE L1 -224 5939 4768 500 212 43 57 chr2 210879396 210879665 -39808189 + L1ME LINE L1 5244 5594 -570 438 80 62 28 chr2 210879665 210879963 -39807891 + (TA)n Simple_repeat Simple_repeat 1 308 0 26 50 0 0 chr2 210879963 210880003 -39807851 + AT_rich Low_complexity Low_complexity 1 40 0 573 59 71 18 chr2 210880012 210880182 -39807672 + (TA)n Simple_repeat Simple_repeat 2 180 0 553 211 38 12 chr2 210880199 210880365 -39807489 + L1P1 LINE L1 5594 5757 -398 304 209 70 0 chr2 210880388 210880474 -39807380 + L1ME3 LINE L1 6064 6155 -7 25 75 0 0 chr2 210880744 210880797 -39807057 + AT_rich Low_complexity Low_complexity 1 53 0 1368 251 88 70 chr2 210881404 210881616 -39806238 + L1ME3A LINE L1 5258 5465 -705 1580 163 74 29 chr2 210881616 210881966 -39805888 + MER47A DNA MER2_type 1 366 0 1368 251 88 70 chr2 210881966 210882563 -39805291 + L1ME3A LINE L1 5465 6081 -89 33 66 0 0 chr2 210884085 210884146 -39803708 + AT_rich Low_complexity Low_complexity 1 61 0 202 200 0 0 chr2 210884349 210884394 -39803460 + (CA)n Simple_repeat Simple_repeat 2 46 0 1443 87 33 83 chr2 210884996 210885237 -39802617 + MER30 DNA MER1_type 2 230 0 1447 139 186 58 chr2 210885425 210885601 -39802253 - MSTA LTR MaLR -40 388 236 2387 75 0 3 chr2 210885601 210885906 -39801948 - AluY SINE Alu -7 304 1 1447 139 186 58 chr2 210885906 210886073 -39801781 - MSTA LTR MaLR -192 236 1 240 186 34 0 chr2 210887474 210887533 -39800321 + (TA)n Simple_repeat Simple_repeat 1 61 0 277 121 52 46 chr2 210887659 210887833 -39800021 + (TA)n Simple_repeat Simple_repeat 2 176 0 204 319 43 32 chr2 210887872 210887966 -39799888 + L2 LINE L2 3212 3306 -7 808 272 101 60 chr2 210888014 210888470 -39799384 - LTR33 LTR ERVL -2 519 40 1771 180 0 7 chr2 210888470 210888765 -39799089 - AluJb SINE Alu -18 294 2 808 272 101 60 chr2 210888765 210888804 -39799050 - LTR33 LTR ERVL -481 40 4 289 330 121 33 chr2 210888822 210888976 -39798878 + MIR SINE MIR 27 207 -55 1835 170 24 3 chr2 210888976 210889312 -39798542 + MER2 DNA MER2_type 2 344 0 289 330 121 33 chr2 210889312 210889372 -39798482 + MIR SINE MIR 207 260 -2 186 261 134 67 chr2 210889696 210889815 -39798039 - MIR3 SINE MIR -20 188 62 391 286 57 36 chr2 210891020 210891212 -39796642 + L1ME LINE L1 5533 5728 -393 336 24 0 0 chr2 210892247 210892288 -39795566 + (CA)n Simple_repeat Simple_repeat 1 41 0 39 0 0 0 chr2 210892623 210892662 -39795192 + AT_rich Low_complexity Low_complexity 1 39 0 292 163 138 25 chr2 210892926 210893006 -39794848 - MIR SINE MIR -50 212 124 2894 223 58 71 chr2 210893330 210894301 -39793553 + L1MC5 LINE L1 6601 7584 -377 3947 88 14 20 chr2 210894301 210894889 -39792965 + L1MA1 LINE L1 5711 6294 -8 2894 223 58 71 chr2 210894889 210894919 -39792935 + L1MC5 LINE L1 7584 7613 -348 2139 115 7 0 chr2 210894919 210895206 -39792648 - AluSx SINE Alu -23 289 1 2894 223 58 71 chr2 210895206 210895543 -39792311 + L1MC5 LINE L1 7613 7924 -37 1138 196 0 0 chr2 210895574 210895783 -39792071 + L1M2 LINE L1 5573 5781 -531 * 1686 190 48 11 chr2 210895782 210896134 -39791720 + L1PA12 LINE L1 1 365 -7216 629 210 12 17 chr2 210896128 210896370 -39791484 + L1PA12 LINE L1 2281 2520 -5064 * 1299 166 37 41 chr2 210896370 210896698 -39791156 - MSTA LTR MaLR 0 364 58 1733 191 51 8 chr2 210896820 210897191 -39790663 + L1PA12 LINE L1 3268 3654 -3930 2373 98 3 0 chr2 210897191 210897497 -39790357 + AluSc SINE Alu 1 307 -2 2183 186 39 4 chr2 210897517 210898006 -39789848 + L1PA12 LINE L1 4319 4824 -2760 241 330 19 0 chr2 210898997 210899103 -39788751 + MIR SINE MIR 146 253 -9 1260 114 95 5 chr2 210900633 210900844 -39787010 + MER30 DNA MER1_type 1 230 0 1057 246 98 14 chr2 210901011 210901357 -39786497 + L1ME2 LINE L1 5771 6145 -19 1768 130 38 82 chr2 210901468 210901860 -39785994 - THE1C LTR MaLR 0 375 1 2506 200 46 10 chr2 210903561 210904172 -39783682 + L1MD2 LINE L1 5190 5819 -423 1784 160 120 40 chr2 210904172 210904622 -39783232 - L1M3 LINE L1 -592 5742 5257 2097 152 35 26 chr2 210904679 210905101 -39782753 + L1MB1 LINE L1 5741 6166 -2 1469 225 127 44 chr2 210905103 210905606 -39782248 + L1MD2 LINE L1 5814 6358 -1 266 214 155 0 chr2 210905999 210906083 -39781771 + MIR SINE MIR 61 157 -105 30 59 0 0 chr2 210906130 210906181 -39781673 + AT_rich Low_complexity Low_complexity 1 51 0 462 283 23 23 chr2 210908162 210908335 -39779519 + MLT1I LTR MaLR 1 173 -236 2124 117 0 3 chr2 210908435 210908725 -39779129 + AluSx SINE Alu 1 289 -23 369 292 93 38 chr2 210910249 210910474 -39777380 - MIR SINE MIR -22 240 2 3071 133 40 10 chr2 210910692 210911187 -39776667 + L1PA15 LINE L1 5655 6164 -1 3508 170 19 2 chr2 210911954 210912757 -39775097 - L1MC/D LINE L1 -524 5809 4992 5276 185 37 25 chr2 210912781 210913773 -39774081 + Charlie1 DNA MER1_type 1559 2538 -223 2435 131 78 0 chr2 210913773 210914170 -39773684 - MSTA LTR MaLR 0 428 1 5276 185 37 25 chr2 210914170 210914298 -39773556 + Charlie1 DNA MER1_type 2538 2696 -65 968 172 155 45 chr2 210914298 210914589 -39773265 + MER33 DNA MER1_type 1 323 -1 5276 185 37 25 chr2 210914589 210914656 -39773198 + Charlie1 DNA MER1_type 2696 2761 0 1490 225 129 53 chr2 210914785 210915599 -39772255 + HAL1 LINE L1 817 1692 -815 502 280 141 25 chr2 210915637 210916033 -39771821 + HAL1 LINE L1 2017 2458 -49 30 0 0 0 chr2 210916063 210916093 -39771761 + AT_rich Low_complexity Low_complexity 1 30 0 278 284 101 48 chr2 210916336 210916544 -39771310 + Charlie8 DNA MER1_type 1 219 -2198 271 274 63 0 chr2 210916632 210916727 -39771127 + Charlie8 DNA MER1_type 388 488 -1929 1915 129 0 14 chr2 210918081 210918361 -39769493 + AluSx SINE Alu 4 279 -33 3864 154 19 111 chr2 210918478 210919395 -39768459 + MER4D LTR ERV1 1 832 -40 817 244 73 91 chr2 210922073 210922482 -39765372 + MLT1I LTR MaLR 1 402 -7 585 284 114 5 chr2 210922929 210923140 -39764714 - MIR SINE MIR -26 236 3 195 382 42 42 chr2 210923184 210923375 -39764479 - L2 LINE L2 -553 2761 2571 1611 263 61 39 chr2 210923445 210923986 -39763868 + MLT1H1 LTR MaLR 1 553 -2 181 39 0 269 chr2 210924706 210924758 -39763096 - L2 LINE L2 -9 3304 3267 24 53 0 0 chr2 210926277 210926315 -39761539 + AT_rich Low_complexity Low_complexity 1 38 0 1936 125 135 46 chr2 210926893 210927109 -39760745 - MSTA LTR MaLR 0 428 233 2804 19 0 0 chr2 210927109 210927416 -39760438 - AluY SINE Alu -4 307 1 1936 125 135 46 chr2 210927416 210927592 -39760262 - MSTA LTR MaLR -195 233 1 306 284 268 11 chr2 210927722 210927905 -39759949 + MIR SINE MIR 28 257 -5 209 392 41 0 chr2 210928241 210928338 -39759516 - L2 LINE L2 -493 2821 2721 271 287 11 23 chr2 210928645 210928732 -39759122 - MER5B DNA MER1_type -4 174 89 263 299 100 58 chr2 210928723 210928964 -39758890 - L2 LINE L2 -1121 2193 1943 * 237 226 0 0 chr2 210929241 210929294 -39758560 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 1959 143 0 14 chr2 210930102 210930396 -39757458 - AluJo SINE Alu -22 290 1 23 0 0 0 chr2 210930472 210930495 -39757359 + AT_rich Low_complexity Low_complexity 1 23 0 408 241 0 0 chr2 210931946 210932029 -39755825 + MER89 LTR ERV1 7 89 -470 * 888 209 20 26 chr2 210932007 210932308 -39755546 + MER89 LTR ERV1 202 559 0 629 293 215 35 chr2 210932575 210933008 -39754846 - LTR33 LTR ERVL -8 513 3 2069 142 0 0 chr2 210933180 210933476 -39754378 - AluSx SINE Alu -16 296 1 33 0 0 0 chr2 210933728 210933761 -39754093 + AT_rich Low_complexity Low_complexity 1 33 0 3626 97 16 0 chr2 210934689 210935205 -39752649 - Tigger1 DNA MER2_type -497 1921 1398 1872 107 46 122 chr2 210935205 210935430 -39752424 - THE1B LTR MaLR 0 364 180 3392 36 17 0 chr2 210935430 210935844 -39752010 - L1PA3 LINE L1 -3 6152 5732 1872 107 46 122 chr2 210935844 210936012 -39751842 - THE1B LTR MaLR -184 180 1 7116 156 33 22 chr2 210936012 210936290 -39751564 - Tigger1 DNA MER2_type -1016 1402 1128 2095 138 0 6 chr2 210936290 210936601 -39751253 - AluSx SINE Alu -3 309 1 7116 156 33 22 chr2 210936601 210936761 -39751093 - Tigger1 DNA MER2_type -1290 1128 971 2175 123 0 3 chr2 210936761 210937062 -39750792 + AluSp SINE Alu 5 304 -9 7116 156 33 22 chr2 210937062 210938013 -39749841 - Tigger1 DNA MER2_type -1447 971 1 727 229 6 23 chr2 210938013 210938188 -39749666 - L1MC3 LINE L1 -1146 6639 6468 4739 268 80 19 chr2 210939127 210941079 -39746775 + L1ME2 LINE L1 16 2085 -4311 5425 228 82 65 chr2 210941225 210944181 -39743673 + L1ME2 LINE L1 2827 5831 -404 3879 167 35 4 chr2 210944181 210944871 -39742983 + MER50 LTR ERV1 1 711 -23 413 280 93 53 chr2 210944873 210945194 -39742660 + L1ME2 LINE L1 5832 6165 -68 3607 157 26 27 chr2 210945890 210948801 -39739053 + L1PA13 LINE L1 3210 6162 -1 5138 141 50 1 chr2 210949016 210949880 -39737974 - L1MA3 LINE L1 0 6305 5400 2428 129 6 3 chr2 210949883 210950232 -39737622 + THE1B LTR MaLR 15 364 0 7885 191 93 24 chr2 210950233 210952898 -39734956 - L1M4 LINE L1 -743 6822 3583 1474 161 24 52 chr2 210952898 210953189 -39734665 - AluJb SINE Alu -23 289 7 7885 191 93 24 chr2 210953189 210954128 -39733726 - L1M4 LINE L1 -3982 3583 2710 198 0 0 0 chr2 210954128 210954150 -39733704 + (TTA)n Simple_repeat Simple_repeat 3 24 0 6831 59 7 0 chr2 210954150 210955016 -39732838 - L1PA7 LINE L1 -18 6136 5265 10720 88 9 3 chr2 210955016 210956524 -39731330 + L1PA7 LINE L1 3740 5255 -891 * 15106 162 32 7 chr2 210956522 210959151 -39728703 - L1M4 LINE L1 -4847 2718 22 22 0 0 0 chr2 210959198 210959220 -39728634 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 210959395 210959419 -39728435 + AT_rich Low_complexity Low_complexity 1 24 0 2174 112 0 0 chr2 210959938 210960225 -39727629 - AluSx SINE Alu -9 303 17 1171 229 128 21 chr2 210962327 210962716 -39725138 - MER63B DNA MER1_type 0 436 6 2120 125 0 3 chr2 210963327 210963631 -39724223 + AluSg SINE Alu 1 303 -7 189 0 0 0 chr2 210963749 210963770 -39724084 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2123 138 0 0 chr2 210966000 210966311 -39721543 - AluSx SINE Alu -1 311 1 2508 79 0 0 chr2 210966964 210967269 -39720585 + AluY SINE Alu 1 305 -6 1500 169 49 26 chr2 210967788 210968055 -39719799 + AluJo SINE Alu 6 278 -34 221 415 15 7 chr2 210968403 210968538 -39719316 - MIR3 SINE MIR -54 154 19 2129 119 0 7 chr2 210971000 210971302 -39716552 - AluSg SINE Alu -10 300 1 235 309 0 60 chr2 210971403 210971487 -39716367 - L2 LINE L2 -6 3307 3229 211 288 0 30 chr2 210972999 210973168 -39714686 - MIR SINE MIR -23 239 12 628 272 30 1 chr2 210973319 210973474 -39714380 + MIR SINE MIR 2 162 -46 500 115 13 0 chr2 210973488 210973566 -39714288 + MADE1 DNA Mariner 1 79 -1 697 244 85 66 chr2 210973595 210973866 -39713988 + MLT1B LTR MaLR 1 276 -114 358 224 59 12 chr2 210974537 210974757 -39713097 + (TA)n Simple_repeat Simple_repeat 1 230 0 210 277 72 36 chr2 210977361 210977444 -39710410 + MIR SINE MIR 22 107 -155 269 304 80 45 chr2 210977770 210977882 -39709972 - L2 LINE L2 0 3313 3198 760 363 54 5 chr2 210978134 210978525 -39709329 - L2 LINE L2 -459 2855 2446 1639 137 78 75 chr2 210978996 210979369 -39708485 - THE1C LTR MaLR 0 375 2 1629 181 7 4 chr2 210979369 210979645 -39708209 - AluJb SINE Alu -33 279 3 315 317 134 11 chr2 210981564 210981750 -39706104 + MIR SINE MIR 21 229 -33 287 299 127 15 chr2 210982754 210982888 -39704966 - L2 LINE L2 -1 3312 3164 502 221 19 0 chr2 210982900 210983004 -39704850 - MIR SINE MIR -155 107 2 201 331 48 32 chr2 210984286 210984410 -39703444 + L2 LINE L2 3187 3312 -1 210 231 13 26 chr2 210986768 210986846 -39701008 + A-rich Low_complexity Low_complexity 3 79 0 592 147 147 0 chr2 210987307 210987423 -39700431 + FLAM_C SINE Alu 6 138 -5 207 161 0 0 chr2 210987646 210987677 -39700177 + polypurine Low_complexity Low_complexity 5 35 0 21 36 0 0 chr2 210988545 210988573 -39699281 + AT_rich Low_complexity Low_complexity 1 28 0 251 182 0 0 chr2 210988773 210988817 -39699037 - MIR SINE MIR -63 145 102 229 238 36 60 chr2 210988931 210989015 -39698839 - MIR SINE MIR -93 115 34 198 71 0 0 chr2 210989313 210989341 -39698513 + (CA)n Simple_repeat Simple_repeat 2 29 0 187 269 96 19 chr2 210989587 210989639 -39698215 + MIR3 SINE MIR 13 68 -140 192 209 70 0 chr2 210989935 210989978 -39697876 + MIR SINE MIR 215 260 -2 435 305 63 42 chr2 210990544 210990783 -39697071 - L2 LINE L2 -225 3047 2804 355 301 74 42 chr2 210991728 210991944 -39695910 - L2 LINE L2 -527 2787 2565 487 299 24 24 chr2 210992246 210992410 -39695444 + MIR SINE MIR 52 215 -47 204 40 0 0 chr2 210994587 210994612 -39693242 + (CATA)n Simple_repeat Simple_repeat 3 27 0 1001 288 69 28 chr2 210994666 210995103 -39692751 - Tigger8 DNA MER2_type -187 479 25 204 313 104 26 chr2 210995991 210996143 -39691711 - MIR SINE MIR -72 190 30 2549 256 190 20 chr2 210997184 210998592 -39689262 + L2 LINE L2 1662 3304 -9 24 0 0 0 chr2 210998686 210998710 -39689144 + AT_rich Low_complexity Low_complexity 1 24 0 4931 70 0 5 chr2 210999647 211000300 -39687554 + L1PA8 LINE L1 5523 6172 0 294 29 0 0 chr2 211002706 211002741 -39685113 + (CA)n Simple_repeat Simple_repeat 2 36 0 566 212 29 15 chr2 211003494 211003631 -39684223 - MIR SINE MIR -10 252 114 423 0 0 0 chr2 211005790 211005837 -39682017 + (TC)n Simple_repeat Simple_repeat 2 48 0 198 71 0 0 chr2 211006164 211006192 -39681662 + (TC)n Simple_repeat Simple_repeat 2 29 0 * 339 130 0 0 chr2 211006191 211006245 -39681609 + (TA)n Simple_repeat Simple_repeat 1 54 0 2341 82 3 0 chr2 211006247 211006541 -39681313 - AluY SINE Alu -16 295 1 431 248 134 25 chr2 211006542 211006744 -39681110 - L1M4 LINE L1 -743 5403 5180 305 306 78 41 chr2 211007076 211007318 -39680536 - L3b LINE CR1 -225 1358 1108 640 254 79 6 chr2 211007986 211008151 -39679703 - MER45A DNA AcHobo -1 177 1 454 287 81 7 chr2 211008805 211008941 -39678913 + MIR SINE MIR 16 161 -101 389 300 189 6 chr2 211008931 211009111 -39678743 - MIR SINE MIR -1 261 49 * 206 226 183 21 chr2 211009143 211009236 -39678618 + MIR SINE MIR 155 262 0 23 0 0 0 chr2 211009467 211009490 -39678364 + AT_rich Low_complexity Low_complexity 1 23 0 1965 165 0 13 chr2 211009636 211009952 -39677902 + AluJb SINE Alu 1 312 0 283 44 44 0 chr2 211011682 211011727 -39676127 + (GGGGA)n Simple_repeat Simple_repeat 2 48 0 1670 232 20 76 chr2 211012084 211012635 -39675219 + MLT2B1 LTR ERVL 1 520 0 204 361 0 0 chr2 211012978 211013050 -39674804 - L2 LINE L2 0 3272 3201 2223 229 55 22 chr2 211013588 211014172 -39673682 + LTR26 LTR ERV1 1 603 0 24 0 0 0 chr2 211014633 211014657 -39673197 + AT_rich Low_complexity Low_complexity 1 24 0 264 226 0 0 chr2 211016050 211016112 -39671742 + (CATA)n Simple_repeat Simple_repeat 2 63 0 884 169 103 0 chr2 211016213 211016397 -39671457 - L1PA13 LINE L1 0 6163 5961 24 0 0 0 chr2 211017391 211017415 -39670439 + AT_rich Low_complexity Low_complexity 1 24 0 1494 126 0 0 chr2 211017868 211018083 -39669771 - AluSg/x SINE Alu -14 298 84 260 306 57 40 chr2 211020359 211020477 -39667377 - L2 LINE L2 0 3272 3153 617 284 53 6 chr2 211020477 211020646 -39667208 - MER5B DNA MER1_type 0 178 2 571 289 127 29 chr2 211020765 211021052 -39666802 - L2 LINE L2 -217 3055 2743 311 217 12 36 chr2 211022182 211022265 -39665589 + MIR SINE MIR 84 164 -98 430 322 44 11 chr2 211022552 211022732 -39665122 + MIR SINE MIR 3 188 -74 234 194 16 32 chr2 211023632 211023694 -39664160 + (TA)n Simple_repeat Simple_repeat 2 62 0 2385 68 0 32 chr2 211023700 211024010 -39663844 - AluY SINE Alu -11 300 1 218 284 0 0 chr2 211024094 211024161 -39663693 + A-rich Low_complexity Low_complexity 1 67 0 390 252 36 65 chr2 211025095 211025234 -39662620 + MIR3 SINE MIR 3 137 -71 737 310 57 4 chr2 211027864 211028093 -39659761 - MIR SINE MIR -8 254 14 1203 181 246 4 chr2 211028736 211029013 -39658841 - MER2 DNA MER2_type -1 344 1 27 0 0 0 chr2 211029213 211029240 -39658614 + AT_rich Low_complexity Low_complexity 1 27 0 1665 253 68 55 chr2 211030771 211031297 -39656557 + MLT1H LTR MaLR 1 533 -16 435 113 0 0 chr2 211031382 211031453 -39656401 + (CCTA)n Simple_repeat Simple_repeat 1 71 0 1975 180 0 32 chr2 211031709 211032086 -39655768 - MLT1A1 LTR MaLR 0 365 1 2012 137 67 17 chr2 211033165 211033522 -39654332 - THE1C LTR MaLR 0 375 1 360 189 9 18 chr2 211034168 211034279 -39653575 + (TA)n Simple_repeat Simple_repeat 2 111 0 2535 165 117 47 chr2 211035602 211036549 -39651305 - MER106B DNA MER1_type 0 1059 1 189 317 132 77 chr2 211036564 211037551 -39650303 + L2 LINE L2 1698 2738 -576 1605 213 48 30 chr2 211039569 211040002 -39647852 + L1ME2 LINE L1 5713 6153 -11 295 252 40 104 chr2 211040037 211040259 -39647595 + L1MC4 LINE L1 7826 8033 -9 2799 10 0 0 chr2 211040605 211040909 -39646945 - AluYa5 SINE Alu -7 304 1 490 281 243 20 chr2 211041630 211042074 -39645780 + L2 LINE L2 2289 2831 -483 466 315 50 84 chr2 211042073 211042394 -39645460 + L2 LINE L2 3003 3312 -1 * 28 0 0 0 chr2 211043938 211043966 -39643888 + AT_rich Low_complexity Low_complexity 1 28 0 1639 198 39 12 chr2 211044898 211045232 -39642622 - MER61A LTR ERV1 0 343 1 1879 207 140 6 chr2 211045296 211045809 -39642045 - MER119 DNA MER1_type 0 583 2 436 274 240 6 chr2 211045818 211045993 -39641861 - MIR SINE MIR -45 217 2 649 158 24 0 chr2 211047347 211047474 -39640380 - L1MA9 LINE L1 0 6312 6183 2264 86 0 13 chr2 211048316 211048629 -39639225 + AluY SINE Alu 1 309 -2 316 290 56 9 chr2 211049368 211049475 -39638379 + L1ME LINE L1 5721 5832 -289 447 317 28 14 chr2 211049607 211049752 -39638102 - MIR SINE MIR -99 163 17 298 252 87 65 chr2 211049879 211050109 -39637745 - L1ME LINE L1 -370 5751 5517 1850 166 0 0 chr2 211051256 211051563 -39636291 + AluSx SINE Alu 1 307 0 1977 110 0 0 chr2 211052002 211052274 -39635580 + AluY SINE Alu 25 296 -15 25 0 0 0 chr2 211054670 211054695 -39633159 + AT_rich Low_complexity Low_complexity 1 25 0 269 122 0 0 chr2 211054697 211054746 -39633108 - L1MA3 LINE L1 0 6305 6257 2634 39 0 0 chr2 211056562 211056870 -39630984 - AluY SINE Alu -3 308 1 17986 136 34 35 chr2 211057162 211060806 -39627048 + L1M1 LINE L1 606 4235 -3330 1397 116 123 8 chr2 211060806 211061072 -39626782 + L1MA3 LINE L1 6007 6305 0 578 191 57 0 chr2 211061130 211061271 -39626583 - L1MB3 LINE L1 0 6183 6035 919 197 32 5 chr2 211061580 211061768 -39626086 + L1MD1 LINE L1 6042 6234 -8 443 324 20 44 chr2 211062625 211062875 -39624979 - MIR SINE MIR -2 260 17 21 0 0 0 chr2 211063739 211063760 -39624094 + AT_rich Low_complexity Low_complexity 1 21 0 184 266 213 11 chr2 211064696 211064790 -39623064 - MIR3 SINE MIR -3 205 93 1203 193 76 7 chr2 211065447 211065748 -39622106 + MER33 DNA MER1_type 1 322 -2 1800 266 160 13 chr2 211065840 211066666 -39621188 + L2 LINE L2 1703 2702 -612 646 211 19 19 chr2 211066670 211066826 -39621028 - MER33 DNA MER1_type -168 156 1 345 310 92 32 chr2 211066854 211067121 -39620733 + L2 LINE L2 2721 3006 -307 221 195 0 0 chr2 211068959 211069000 -39618854 - L2 LINE L2 0 3313 3273 462 228 195 0 chr2 211069699 211069848 -39618006 + MER45A DNA AcHobo 1 178 0 1803 166 7 3 chr2 211070507 211070797 -39617057 - AluJb SINE Alu -10 302 12 6144 94 20 26 chr2 211073822 211074809 -39613045 + L1PA11 LINE L1 5193 6174 0 2136 105 3 3 chr2 211075221 211075506 -39612348 + AluSg1 SINE Alu 1 285 -24 2198 109 10 0 chr2 211075514 211075801 -39612053 + AluSg SINE Alu 1 293 -17 432 56 42 0 chr2 211075801 211075873 -39611981 + (TA)n Simple_repeat Simple_repeat 2 76 0 2198 109 10 0 chr2 211075873 211075889 -39611965 + AluSg SINE Alu 293 307 -3 221 301 29 66 chr2 211076443 211076579 -39611275 + MER5A DNA MER1_type 56 186 -3 2275 96 7 3 chr2 211078575 211078878 -39608976 - AluSc SINE Alu -5 304 1 228 189 81 90 chr2 211079748 211079859 -39607995 - MIR3 SINE MIR -86 122 13 25 0 0 0 chr2 211080531 211080556 -39607298 + AT_rich Low_complexity Low_complexity 1 25 0 622 245 45 7 chr2 211081689 211081844 -39606010 + MER8 DNA MER2_type 1 161 -78 3072 37 0 16 chr2 211081846 211082228 -39605626 - L1PA5 LINE L1 0 6154 5779 499 180 45 0 chr2 211082281 211082370 -39605484 + MER8 DNA MER2_type 147 239 0 409 232 50 0 chr2 211083676 211083775 -39604079 + MER5A DNA MER1_type 9 112 -77 866 198 29 0 chr2 211083998 211084170 -39603684 + L1MB7 LINE L1 5998 6174 -10 1457 210 58 30 chr2 211084278 211084678 -39603176 + L1ME2 LINE L1 5754 6164 0 200 0 100 0 chr2 211085064 211085094 -39602760 + T-rich Low_complexity Low_complexity 4 36 0 2022 143 0 0 chr2 211085110 211085397 -39602457 - AluSq SINE Alu -26 287 1 263 386 98 20 chr2 211085516 211085770 -39602084 + L2 LINE L2 3020 3293 -20 301 237 31 0 chr2 211086927 211087024 -39600830 + (TA)n Simple_repeat Simple_repeat 1 100 0 21 0 0 0 chr2 211087127 211087148 -39600706 + AT_rich Low_complexity Low_complexity 1 21 0 242 236 236 81 chr2 211089872 211090033 -39597821 + MER5A DNA MER1_type 4 189 0 244 293 9 94 chr2 211090667 211090773 -39597081 + MIR3 SINE MIR 103 199 -9 348 342 27 27 chr2 211090834 211091018 -39596836 + MIR SINE MIR 64 247 -15 21 0 0 0 chr2 211091442 211091463 -39596391 + AT_rich Low_complexity Low_complexity 1 21 0 2002 120 0 14 chr2 211092155 211092446 -39595408 - AluSq SINE Alu -1 312 26 302 253 103 0 chr2 211092516 211092603 -39595251 + L1MC4 LINE L1 6610 6705 -1337 240 214 31 82 chr2 211092663 211092761 -39595093 + L2 LINE L2 3221 3313 0 224 273 78 0 chr2 211092857 211092934 -39594920 - MIR SINE MIR -11 251 169 5953 81 20 28 chr2 211093466 211094334 -39593520 - L1PB1 LINE L1 -2 6149 5289 230 284 90 0 chr2 211094360 211094427 -39593427 + MER20 DNA MER1_type 50 122 -97 586 348 80 30 chr2 211094456 211095124 -39592730 - L2 LINE L2 -25 3288 2587 2716 134 9 7 chr2 211096103 211096527 -39591327 + MER61B LTR ERV1 1 425 0 263 238 40 103 chr2 211096910 211097036 -39590818 - MIR SINE MIR -58 150 33 258 32 0 0 chr2 211097302 211097333 -39590521 + (T)n Simple_repeat Simple_repeat 1 31 0 474 18 0 0 chr2 211098043 211098098 -39589756 + (GA)n Simple_repeat Simple_repeat 1 55 0 240 145 0 58 chr2 211100428 211100497 -39587357 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 1444 181 88 50 chr2 211100502 211100988 -39586866 - L1MA9 LINE L1 -77 6235 5694 982 260 44 56 chr2 211101403 211101873 -39585981 + MER39 LTR ERV1 67 707 0 4679 157 37 30 chr2 211102215 211103684 -39584170 + L1MA7 LINE L1 4652 6124 -167 189 0 0 0 chr2 211103684 211103705 -39584149 + (TA)n Simple_repeat Simple_repeat 1 21 0 2231 104 3 0 chr2 211103705 211103994 -39583860 - AluSc SINE Alu -18 291 2 416 250 0 0 chr2 211104045 211104125 -39583729 + FRAM/FAM SINE Alu 1 79 -87 1919 151 3 10 chr2 211104180 211104479 -39583375 + LTR9 LTR ERV1 316 612 0 180 377 39 0 chr2 211104681 211104758 -39583096 + L2 LINE L2 11 90 -3224 590 327 58 72 chr2 211105078 211105580 -39582274 + L2 LINE L2 2817 3311 -2 294 312 0 0 chr2 211105888 211105965 -39581889 + L2 LINE L2 3003 3079 -193 226 229 0 0 chr2 211106915 211106963 -39580891 + (CATATA)n Simple_repeat Simple_repeat 2 49 0 1857 98 0 0 chr2 211107265 211107500 -39580354 + AluSq SINE Alu 1 235 -78 249 83 0 0 chr2 211108746 211108782 -39579072 + (TA)n Simple_repeat Simple_repeat 2 37 0 182 255 59 0 chr2 211109111 211109162 -39578692 + L3b LINE CR1 1390 1443 -140 332 130 14 0 chr2 211110544 211110613 -39577241 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 1201 135 5 58 chr2 211110613 211110820 -39577034 - AluJo SINE Alu -31 281 86 233 284 49 12 chr2 211110835 211110916 -39576938 + HAL1 LINE L1 1511 1594 -913 1925 102 53 37 chr2 211110967 211111289 -39576565 - Tigger7 DNA MER2_type 0 2487 2161 * 2844 198 50 0 chr2 211111286 211111821 -39576033 - Tigger7 DNA MER2_type -171 562 1 314 283 33 0 chr2 211111910 211112002 -39575852 - MER112 DNA MER1_type -165 95 1 300 266 84 35 chr2 211112633 211112776 -39575078 - MLT1A1 LTR MaLR -187 178 29 236 297 81 47 chr2 211112828 211113235 -39574619 - L1ME LINE L1 -444 5677 5257 22 0 0 0 chr2 211113789 211113811 -39574043 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr2 211114816 211114850 -39573004 + AT_rich Low_complexity Low_complexity 1 34 0 1540 167 52 0 chr2 211115585 211115836 -39572018 + AluSg SINE Alu 3 266 -44 195 42 0 0 chr2 211115849 211115873 -39571981 + (GGAGA)n Simple_repeat Simple_repeat 5 28 0 875 226 0 0 chr2 211116107 211116288 -39571566 + MER5A DNA MER1_type 7 187 -2 1555 190 51 3 chr2 211118252 211118563 -39569291 - MER44D DNA MER2_type 0 609 14 1004 186 40 4 chr2 211120407 211120659 -39567195 - L1MA4 LINE L1 -10 6290 6030 1946 125 29 0 chr2 211120743 211120867 -39566987 + AluSx SINE Alu 1 120 -192 369 0 0 0 chr2 211120867 211120908 -39566946 + (CA)n Simple_repeat Simple_repeat 2 42 0 1946 125 29 0 chr2 211120908 211121062 -39566792 + AluSx SINE Alu 120 287 -25 233 237 144 62 chr2 211121203 211121300 -39566554 + L2 LINE L2 3122 3226 -46 477 344 91 0 chr2 211121344 211121574 -39566280 + L3 LINE CR1 1200 1450 -127 1166 124 6 0 chr2 211121674 211121835 -39566019 + AluSg/x SINE Alu 135 296 -14 232 191 96 0 chr2 211122355 211122449 -39565405 - L1ME4a LINE L1 -12 6109 6007 1980 139 7 0 chr2 211122589 211122877 -39564977 - AluSx SINE Alu -22 290 1 964 176 195 44 chr2 211123282 211123363 -39564491 - MER47A DNA MER2_type -1957 366 299 222 37 0 0 chr2 211123363 211123390 -39564464 + (CCTAG)n Simple_repeat Simple_repeat 2 28 0 964 176 195 44 chr2 211123390 211123626 -39564228 - MER47A DNA MER2_type -2024 299 1 249 356 0 10 chr2 211123715 211123819 -39564035 + G-rich Low_complexity Low_complexity 1 103 0 193 346 74 25 chr2 211123857 211123938 -39563916 + L2 LINE L2 2998 3082 -190 400 301 113 27 chr2 211124157 211124343 -39563511 - MIR SINE MIR -47 215 14 186 243 216 14 chr2 211124443 211124517 -39563337 - L2 LINE L2 -582 2732 2644 263 331 88 57 chr2 211124955 211125433 -39562421 - L2 LINE L2 -49 3264 2744 2379 110 31 8 chr2 211125433 211125788 -39562066 - THE1B LTR MaLR 0 364 2 263 331 88 57 chr2 211125788 211125809 -39562045 - L2 LINE L2 -569 2744 2725 2247 84 0 13 chr2 211127002 211127300 -39560554 - AluY SINE Alu 0 311 18 22 35 0 0 chr2 211128194 211128223 -39559631 + AT_rich Low_complexity Low_complexity 1 29 0 2643 182 46 4 chr2 211179010 211179532 -39508322 - L1MD3 LINE L1 -49 7946 7403 283 241 0 0 chr2 211179534 211179588 -39508266 - MLT1F1 LTR MaLR -445 122 69 674 119 23 102 chr2 211179593 211179770 -39508084 - L1MD3 LINE L1 -877 7118 6956 397 277 93 8 chr2 211179772 211180011 -39507843 - L1M3 LINE L1 -732 5439 5184 892 259 45 19 chr2 211181575 211181934 -39505920 + L1ME3A LINE L1 4313 4680 -1466 3369 58 5 0 chr2 211182043 211182476 -39505378 + L1P LINE L1 2 436 -5710 261 307 193 28 chr2 211182576 211182752 -39505102 - L2 LINE L2 -327 2945 2743 4955 69 0 5 chr2 211184553 211185206 -39502648 + L1PA8 LINE L1 5523 6172 0 294 29 0 0 chr2 211187612 211187647 -39500207 + (CA)n Simple_repeat Simple_repeat 2 36 0 24582 32 16 1 chr2 211187995 211193472 -39494382 - L1PA2 LINE L1 -71 6084 484 1319 123 99 8 chr2 211193577 211193829 -39494025 + L1MA4 LINE L1 6026 6300 0 495 297 160 21 chr2 211193863 211194426 -39493428 + L1ME3A LINE L1 5317 5957 -213 22 0 0 0 chr2 211194644 211194666 -39493188 + AT_rich Low_complexity Low_complexity 1 22 0 279 336 42 35 chr2 211195005 211195148 -39492706 + L2 LINE L2 3169 3312 -1 2236 76 48 25 chr2 211195451 211195805 -39492049 - L1MA1 LINE L1 0 6302 5941 515 269 13 13 chr2 211196454 211196610 -39491244 - L2 LINE L2 0 3313 3158 2322 97 3 3 chr2 211197964 211198272 -39489582 - AluSx SINE Alu -4 308 1 352 323 15 8 chr2 211198850 211198983 -39488871 + GA-rich Low_complexity Low_complexity 4 137 0 21 57 0 0 chr2 211199546 211199581 -39488273 + AT_rich Low_complexity Low_complexity 1 35 0 29 28 0 0 chr2 211199935 211199971 -39487883 + AT_rich Low_complexity Low_complexity 1 36 0 1095 217 70 98 chr2 211199990 211200521 -39487333 - MER34 LTR ERV1 0 542 27 184 295 42 42 chr2 211201844 211201939 -39485915 - L3 LINE CR1 -401 1176 1082 23 0 0 0 chr2 211201963 211201986 -39485868 + AT_rich Low_complexity Low_complexity 1 23 0 319 247 49 0 chr2 211202134 211202215 -39485639 - HAL1b LINE L1 -435 913 829 736 275 7 66 chr2 211202252 211202539 -39485315 + L2 LINE L2 3044 3313 0 796 235 131 38 chr2 211202676 211202983 -39484871 - L1MC3 LINE L1 -347 5823 5499 351 0 0 0 chr2 211204639 211204678 -39483176 + (TC)n Simple_repeat Simple_repeat 2 40 0 204 40 0 0 chr2 211205004 211205029 -39482825 + (TC)n Simple_repeat Simple_repeat 2 26 0 312 137 0 0 chr2 211205029 211205080 -39482774 + (TA)n Simple_repeat Simple_repeat 2 52 0 2350 81 3 0 chr2 211205082 211205377 -39482477 - AluY SINE Alu -15 296 1 431 248 134 25 chr2 211205378 211205580 -39482274 - L1MC3 LINE L1 -743 5403 5180 305 306 78 41 chr2 211205912 211206154 -39481700 - L3b LINE CR1 -225 1358 1108 640 254 79 6 chr2 211206822 211206987 -39480867 - MER45A DNA AcHobo -1 177 1 454 287 81 7 chr2 211207641 211207777 -39480077 + MIR SINE MIR 16 161 -101 389 300 189 6 chr2 211207767 211207947 -39479907 - MIR SINE MIR -1 261 49 * 206 226 183 21 chr2 211207979 211208072 -39479782 + MIR SINE MIR 155 262 0 23 0 0 0 chr2 211208303 211208326 -39479528 + AT_rich Low_complexity Low_complexity 1 23 0 1965 165 0 13 chr2 211208472 211208788 -39479066 + AluJb SINE Alu 1 312 0 242 56 28 0 chr2 211210518 211210554 -39477300 + (GGGGA)n Simple_repeat Simple_repeat 2 38 0 1695 231 20 76 chr2 211210911 211211462 -39476392 + MLT2B1 LTR ERVL 1 520 0 204 361 0 0 chr2 211211806 211211878 -39475976 - L2 LINE L2 0 3272 3201 2223 229 55 22 chr2 211212416 211213000 -39474854 + LTR26 LTR ERV1 1 603 0 24 0 0 0 chr2 211213461 211213485 -39474369 + AT_rich Low_complexity Low_complexity 1 24 0 267 189 0 0 chr2 211214881 211214934 -39472920 + (CA)n Simple_repeat Simple_repeat 2 54 0 884 169 103 0 chr2 211215036 211215220 -39472634 - L1PA13 LINE L1 0 6163 5961 24 0 0 0 chr2 211216216 211216240 -39471614 + AT_rich Low_complexity Low_complexity 1 24 0 1494 126 0 0 chr2 211216691 211216906 -39470948 - AluSg/x SINE Alu -14 298 84 1816 155 7 7 chr2 211218010 211218300 -39469554 - AluJb SINE Alu -20 292 3 967 210 16 0 chr2 211219013 211219199 -39468655 - MER5A DNA MER1_type 0 189 1 251 220 0 0 chr2 211219609 211219659 -39468195 - L2 LINE L2 0 3313 3264 505 245 170 19 chr2 211219712 211219871 -39467983 - MIR SINE MIR -69 193 11 623 302 65 12 chr2 211220409 211220657 -39467197 - MIR SINE MIR 0 262 2 25 0 0 0 chr2 211223713 211223738 -39464116 + AT_rich Low_complexity Low_complexity 1 25 0 558 258 141 14 chr2 211223864 211224077 -39463777 - MIR SINE MIR 0 262 23 202 281 0 18 chr2 211224854 211224911 -39462943 + GA-rich Low_complexity Low_complexity 5 60 0 462 298 30 0 chr2 211224938 211225069 -39462785 - L3 LINE CR1 -265 1312 1178 2189 118 13 3 chr2 211225216 211225522 -39462332 - AluSx SINE Alu 0 312 4 25 0 0 0 chr2 211225566 211225591 -39462263 + AT_rich Low_complexity Low_complexity 1 25 0 476 286 45 63 chr2 211225676 211225760 -39462094 - L1ME4a LINE L1 -206 5915 5831 2575 14 0 17 chr2 211225760 211226054 -39461800 - AluYb8 SINE Alu 0 318 30 476 286 45 63 chr2 211226054 211226301 -39461553 - L1ME4a LINE L1 -290 5831 5590 252 318 182 6 chr2 211226374 211226544 -39461310 + L2 LINE L2 3106 3305 -8 32 67 0 0 chr2 211227946 211228006 -39459848 + AT_rich Low_complexity Low_complexity 1 60 0 324 272 35 83 chr2 211231113 211231282 -39456572 - MIR SINE MIR -23 239 79 226 264 0 0 chr2 211232174 211232227 -39455627 + MIR SINE MIR 101 153 -109 2039 117 3 13 chr2 211232673 211232972 -39454882 - AluSg SINE Alu -14 296 1 276 30 0 0 chr2 211234522 211234555 -39453299 + (TG)n Simple_repeat Simple_repeat 2 34 0 22 56 0 0 chr2 211236577 211236613 -39451241 + AT_rich Low_complexity Low_complexity 1 36 0 217 250 288 25 chr2 211237051 211237211 -39450643 - MIR SINE MIR -56 206 5 207 290 32 0 chr2 211237925 211237987 -39449867 + MIR SINE MIR 83 146 -62 270 0 0 0 chr2 211239048 211239078 -39448776 + (CA)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr2 211241432 211241453 -39446401 + AT_rich Low_complexity Low_complexity 1 21 0 214 313 0 62 chr2 211242438 211242518 -39445336 + MIR3 SINE MIR 93 167 -41 2210 116 0 0 chr2 211242518 211242821 -39445033 + AluSx SINE Alu 1 303 -9 343 359 81 19 chr2 211243505 211243714 -39444140 - MIR SINE MIR -27 235 14 258 288 0 15 chr2 211243947 211244013 -39443841 + GA-rich Low_complexity Low_complexity 3 67 0 193 322 119 0 chr2 211244813 211244872 -39442982 - L2 LINE L2 -2 3311 3246 486 288 95 31 chr2 211244960 211245182 -39442672 - MIR SINE MIR 0 262 27 456 19 0 0 chr2 211245941 211245994 -39441860 + (CA)n Simple_repeat Simple_repeat 2 54 0 2279 100 3 6 chr2 211246023 211246334 -39441520 + AluSp SINE Alu 1 310 -3 576 192 23 39 chr2 211246683 211246813 -39441041 - FLAM_A SINE Alu -4 129 2 727 250 11 6 chr2 211247208 211247384 -39440470 - MIR SINE MIR -41 221 45 238 135 0 0 chr2 211247588 211247625 -39440229 + tRNA-Glu-GAG tRNA tRNA 1 37 -38 325 227 56 3 chr2 211249046 211249395 -39438459 + (TA)n Simple_repeat Simple_repeat 1 367 0 2057 85 41 14 chr2 211249395 211249688 -39438166 - AluY SINE Alu -10 301 1 831 230 5 35 chr2 211250209 211250409 -39437445 - MLT1F LTR MaLR 0 542 349 3931 167 59 56 chr2 211250429 211252110 -39435744 - L1MB7 LINE L1 -8 6176 4519 22 56 0 0 chr2 211252124 211252160 -39435694 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr2 211253223 211253248 -39434606 + AT_rich Low_complexity Low_complexity 1 25 0 252 0 0 0 chr2 211254613 211254641 -39433213 + (CA)n Simple_repeat Simple_repeat 2 29 0 710 163 112 51 chr2 211254755 211254933 -39432921 - MER5A DNA MER1_type 0 189 1 469 339 36 31 chr2 211254968 211255160 -39432694 - MIR3 SINE MIR -7 201 9 23 0 0 0 chr2 211256058 211256081 -39431773 + AT_rich Low_complexity Low_complexity 1 23 0 262 293 138 8 chr2 211256125 211256248 -39431606 + MIR3 SINE MIR 42 180 -28 470 227 0 45 chr2 211258772 211258882 -39428972 + L2 LINE L2 3191 3295 -18 268 353 69 17 chr2 211259077 211259193 -39428661 + L2 LINE L2 3125 3246 -26 229 274 32 63 chr2 211259303 211259398 -39428456 - L2 LINE L2 -35 3237 3146 27 81 0 0 chr2 211259538 211259600 -39428254 + AT_rich Low_complexity Low_complexity 1 62 0 304 305 78 31 chr2 211260546 211260674 -39427180 - L2 LINE L2 -2 3270 3137 1939 114 0 0 chr2 211263041 211263340 -39424514 + AluSq SINE Alu 41 339 0 1953 114 0 30 chr2 211263371 211263668 -39424186 + AluSc SINE Alu 1 288 -21 462 244 137 34 chr2 211267141 211267469 -39420385 + L1M4 LINE L1 2233 2594 -3552 438 246 33 99 chr2 211267636 211267908 -39419946 + L1M4 LINE L1 2716 2969 -3177 904 262 99 40 chr2 211268072 211268675 -39419179 + L1MC5 LINE L1 7270 7908 -53 317 320 99 22 chr2 211268734 211268956 -39418898 + L1M4 LINE L1 3095 3333 -2813 2201 114 0 3 chr2 211269255 211269554 -39418300 + AluSg SINE Alu 1 298 -12 2150 276 107 14 chr2 211269701 211269908 -39417946 + L1MC/D LINE L1 3043 3229 -2917 1270 141 117 99 chr2 211269908 211270241 -39417613 + MER44D DNA MER2_type 1 609 0 2150 276 107 14 chr2 211270241 211271097 -39416757 + L1MC/D LINE L1 3229 4205 -1941 774 268 109 35 chr2 211271108 211271920 -39415934 + L1MC/D LINE L1 4906 5777 -586 1347 165 25 113 chr2 211272800 211273200 -39414654 + MLT1A1 LTR MaLR 1 365 0 1192 233 53 72 chr2 211273315 211273881 -39413973 - MLT1H1 LTR MaLR 0 555 1 251 161 129 0 chr2 211275545 211275607 -39412247 + MER103 DNA DNA 74 143 -23 1613 161 82 25 chr2 211275637 211275954 -39411900 - MER1B DNA MER1_type 0 337 3 24 67 0 0 chr2 211276466 211276511 -39411343 + AT_rich Low_complexity Low_complexity 1 45 0 2013 125 0 19 chr2 211279921 211280232 -39407622 + AluSq SINE Alu 1 305 -8 21 0 0 0 chr2 211280697 211280718 -39407136 + AT_rich Low_complexity Low_complexity 1 21 0 682 306 78 16 chr2 211280980 211281300 -39406554 + L1MC4a LINE L1 6563 6902 -906 348 315 121 41 chr2 211281534 211281848 -39406006 + L1MC4 LINE L1 7100 7438 -604 311 285 181 22 chr2 211281857 211282260 -39405594 + L1MC5 LINE L1 7271 7737 -224 481 283 33 15 chr2 211283006 211283278 -39404576 + L1M4 LINE L1 2114 2390 -3756 490 293 96 79 chr2 211283286 211284751 -39403103 + L1M4 LINE L1 2456 3944 -2202 1324 199 30 37 chr2 211285009 211285306 -39402548 + AluJo SINE Alu 1 295 -17 261 0 0 0 chr2 211285348 211285377 -39402477 + (A)n Simple_repeat Simple_repeat 1 29 0 389 293 43 0 chr2 211285856 211285972 -39401882 - MIR SINE MIR -55 153 33 2532 161 25 5 chr2 211286542 211286989 -39400865 - MSTB2 LTR MaLR -1 456 1 343 328 56 33 chr2 211287408 211287588 -39400266 - MER5A DNA MER1_type -5 184 1 22 0 0 0 chr2 211288258 211288280 -39399574 + AT_rich Low_complexity Low_complexity 1 22 0 216 241 60 86 chr2 211288408 211288524 -39399330 + L2 LINE L2 1801 1913 -1401 626 238 47 35 chr2 211288721 211288893 -39398961 + MIR SINE MIR 66 239 -23 36 0 0 0 chr2 211289110 211289146 -39398708 + AT_rich Low_complexity Low_complexity 1 36 0 576 132 0 0 chr2 211289146 211289237 -39398617 - L1MA4 LINE L1 -5 6295 6205 341 131 143 12 chr2 211289237 211289321 -39398533 + L1MA4 LINE L1 6108 6202 -98 23 54 0 0 chr2 211289434 211289471 -39398383 + AT_rich Low_complexity Low_complexity 1 37 0 238 254 0 14 chr2 211289772 211289843 -39398011 + (TTCA)n Simple_repeat Simple_repeat 4 73 0 24 53 0 0 chr2 211290241 211290279 -39397575 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 211290660 211290688 -39397166 + AT_rich Low_complexity Low_complexity 1 28 0 656 268 62 40 chr2 211290933 211291157 -39396697 - MIR SINE MIR -21 241 13 322 214 119 56 chr2 211292223 211292349 -39395505 - MARNA DNA Mariner -349 237 104 441 318 16 4 chr2 211292363 211292504 -39395350 + MIR SINE MIR 7 152 -61 185 323 31 0 chr2 211293048 211293113 -39394741 - L2 LINE L2 -349 2965 2899 4683 183 22 25 chr2 211293205 211294574 -39393280 + L1MB3 LINE L1 4817 6183 0 561 258 0 0 chr2 211294666 211294829 -39393025 + (CATATA)n Simple_repeat Simple_repeat 2 164 0 269 154 0 0 chr2 211294830 211294882 -39392972 - L1MC4 LINE L1 -1339 6703 6652 432 181 0 0 chr2 211294886 211294969 -39392885 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 234 221 0 63 chr2 211294971 211295066 -39392788 - L1MC4 LINE L1 -1340 6702 6614 307 211 22 0 chr2 211295073 211295163 -39392691 + (TA)n Simple_repeat Simple_repeat 2 93 0 180 0 0 0 chr2 211295505 211295525 -39392329 + (TA)n Simple_repeat Simple_repeat 2 21 0 * 279 54 0 0 chr2 211295524 211295561 -39392293 + (TG)n Simple_repeat Simple_repeat 2 38 0 262 293 154 41 chr2 211297327 211297450 -39390404 - L2 LINE L2 -27 3245 3109 1499 65 0 5 chr2 211297795 211297994 -39389860 + L1PA5 LINE L1 5957 6154 0 297 0 0 0 chr2 211298002 211298035 -39389819 + (TA)n Simple_repeat Simple_repeat 1 33 0 2108 113 3 13 chr2 211298782 211299084 -39388770 - AluSq SINE Alu -14 299 1 375 23 0 0 chr2 211299988 211300032 -39387822 + (TA)n Simple_repeat Simple_repeat 1 44 0 568 211 9 0 chr2 211301434 211301548 -39386306 + MER94 DNA DNA 2 116 -18 1490 196 3 3 chr2 211301650 211301972 -39385882 - MER33 DNA MER1_type -2 322 1 209 111 0 123 chr2 211302209 211302290 -39385564 + (TTAA)n Simple_repeat Simple_repeat 4 74 0 2187 146 11 19 chr2 211302899 211303276 -39384578 + THE1C LTR MaLR 2 375 0 991 244 52 9 chr2 211304325 211304555 -39383299 + MIR SINE MIR 1 240 -22 273 210 0 0 chr2 211306613 211306675 -39381179 + (TA)n Simple_repeat Simple_repeat 2 63 0 26 30 0 0 chr2 211306852 211306885 -39380969 + AT_rich Low_complexity Low_complexity 1 33 0 2203 96 3 0 chr2 211306893 211307210 -39380644 + AluSx SINE Alu 2 319 0 7666 20 6 0 chr2 211307612 211308634 -39379220 + L1PA3 LINE L1 5129 6155 0 297 295 98 26 chr2 211308912 211309105 -39378749 + MIR SINE MIR 28 234 -28 21 36 0 0 chr2 211309224 211309252 -39378602 + AT_rich Low_complexity Low_complexity 1 28 0 2194 129 0 0 chr2 211312177 211312487 -39375367 + AluSg SINE Alu 1 310 0 2086 139 3 3 chr2 211312669 211312978 -39374876 + AluSx SINE Alu 1 309 -3 1007 301 14 3 chr2 211314465 211314747 -39373107 + MER69 DNA AcHobo 1 285 -2241 338 165 39 55 chr2 211314748 211314930 -39372924 + (TA)n Simple_repeat Simple_repeat 2 180 0 243 192 17 87 chr2 211314882 211315054 -39372800 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 * 201 181 21 109 chr2 211315038 211315231 -39372623 + (CATATA)n Simple_repeat Simple_repeat 3 178 0 * 374 142 20 137 chr2 211315148 211315425 -39372429 + (TA)n Simple_repeat Simple_repeat 1 244 0 373 163 15 102 chr2 211315848 211316044 -39371810 + (TA)n Simple_repeat Simple_repeat 1 179 0 282 117 22 86 chr2 211316060 211316306 -39371548 + (TA)n Simple_repeat Simple_repeat 1 230 0 355 338 44 0 chr2 211316306 211316442 -39371412 - MER69 DNA AcHobo -787 439 298 189 0 0 0 chr2 211316491 211316512 -39371342 + (TA)n Simple_repeat Simple_repeat 2 22 0 419 468 13 21 chr2 211316524 211316758 -39371096 + (TA)n Simple_repeat Simple_repeat 1 231 0 1284 253 86 26 chr2 211316823 211317394 -39370460 + MER69 DNA AcHobo 298 833 -1693 2095 121 0 19 chr2 211317394 211317709 -39370145 + AluSx SINE Alu 1 309 -3 1284 253 86 26 chr2 211317709 211317956 -39369898 + MER69 DNA AcHobo 833 2526 0 390 294 42 21 chr2 211318024 211318167 -39369687 - L2 LINE L2 -10 3303 3158 180 202 32 106 chr2 211319645 211319739 -39368115 + L2 LINE L2 1919 2005 -1309 405 202 61 9 chr2 211321675 211321789 -39366065 - MLT1H LTR MaLR -429 120 1 521 262 171 9 chr2 211322380 211322590 -39365264 - MER112 DNA MER1_type -6 254 11 297 313 52 10 chr2 211322786 211322882 -39364972 - L2 LINE L2 -14 3258 3159 181 308 0 15 chr2 211323028 211323093 -39364761 - L2 LINE L2 -4 3309 3246 2007 137 20 191 chr2 211323584 211324271 -39363583 - L1MA9 LINE L1 -1715 4431 3862 4828 172 18 36 chr2 211324271 211326187 -39361667 + L1MA9 LINE L1 4433 6312 0 396 274 276 32 chr2 211326205 211326585 -39361269 + L2 LINE L2 2833 3305 -8 2118 102 0 7 chr2 211328108 211328402 -39359452 + AluSx SINE Alu 21 312 0 534 359 42 4 chr2 211328426 211328663 -39359191 - MIR SINE MIR -1 261 16 189 0 0 0 chr2 211329083 211329104 -39358750 + (A)n Simple_repeat Simple_repeat 1 21 0 284 290 60 30 chr2 211330733 211330833 -39357021 + MIR SINE MIR 41 143 -65 549 25 38 0 chr2 211330905 211330984 -39356870 + (GA)n Simple_repeat Simple_repeat 2 83 0 3629 176 24 16 chr2 211332833 211333589 -39354265 + L1MB8 LINE L1 5413 6174 -4 216 0 0 0 chr2 211333805 211333829 -39354025 + (T)n Simple_repeat Simple_repeat 1 24 0 309 260 221 0 chr2 211334060 211334164 -39353690 - MIR3 SINE MIR -46 162 36 247 371 105 8 chr2 211334428 211334552 -39353302 + L2 LINE L2 3133 3268 -4 440 324 35 88 chr2 211336160 211336503 -39351351 - L2 LINE L2 -411 2903 2579 239 281 49 12 chr2 211336721 211336803 -39351051 - L2 LINE L2 -1 3271 3187 194 152 0 22 chr2 211336938 211336984 -39350870 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 2559 145 2 40 chr2 211337125 211337574 -39350280 + Tigger2a DNA MER2_type 3 434 0 529 329 92 29 chr2 211337697 211337937 -39349917 + L2 LINE L2 3014 3268 -4 499 241 7 55 chr2 211338936 211339081 -39348773 + MER20 DNA MER1_type 80 217 -2 589 275 82 91 chr2 211340234 211340895 -39346959 + HAL1 LINE L1 16 670 -1837 1057 235 151 69 chr2 211340917 211341380 -39346474 + MLT1F LTR MaLR 3 503 -39 399 252 94 6 chr2 211341509 211341668 -39346186 + HAL1 LINE L1 772 944 -1563 1444 276 59 17 chr2 211341747 211342290 -39345564 + HAL1 LINE L1 1390 1955 -552 407 250 36 27 chr2 211342530 211342642 -39345212 + MIR SINE MIR 115 227 -35 2594 44 0 0 chr2 211342868 211343166 -39344688 - AluY SINE Alu -13 298 1 200 239 65 0 chr2 211343485 211343531 -39344323 - L2 LINE L2 -4 3309 3261 216 254 48 0 chr2 211343690 211343753 -39344101 + MIR SINE MIR 81 146 -62 6065 156 11 15 chr2 211344545 211345213 -39342641 + L1PB2 LINE L1 4333 5002 -1149 1978 140 40 32 chr2 211345213 211345584 -39342270 - THE1C LTR MaLR -1 374 1 6065 156 11 15 chr2 211345584 211346738 -39341116 + L1PB2 LINE L1 5002 6148 -3 1479 52 0 0 chr2 211347617 211347791 -39340063 - AluY SINE Alu -16 295 122 2029 140 0 13 chr2 211347850 211348157 -39339697 - AluSx SINE Alu -9 303 1 628 303 84 58 chr2 211348646 211348999 -39338855 + LTR33 LTR ERVL 24 395 -126 2527 45 0 10 chr2 211348999 211349309 -39338545 - AluY SINE Alu -4 307 1 628 303 84 58 chr2 211349309 211349440 -39338414 + LTR33 LTR ERVL 395 521 0 2115 109 3 10 chr2 211349939 211350233 -39337621 + AluSx SINE Alu 13 304 -8 824 249 18 76 chr2 211350306 211350583 -39337271 - MIR SINE MIR 0 262 2 201 331 48 32 chr2 211351865 211351989 -39335865 + L2 LINE L2 3187 3312 -1 210 231 13 26 chr2 211354347 211354425 -39333429 + A-rich Low_complexity Low_complexity 3 79 0 585 148 148 0 chr2 211354886 211355001 -39332853 + FLAM_C SINE Alu 6 137 -6 207 161 0 0 chr2 211355224 211355255 -39332599 + polypurine Low_complexity Low_complexity 5 35 0 21 36 0 0 chr2 211356123 211356151 -39331703 + AT_rich Low_complexity Low_complexity 1 28 0 251 182 0 0 chr2 211356351 211356395 -39331459 - MIR SINE MIR -63 145 102 229 238 36 60 chr2 211356509 211356593 -39331261 - MIR SINE MIR -93 115 34 198 71 0 0 chr2 211356891 211356919 -39330935 + (CA)n Simple_repeat Simple_repeat 2 29 0 187 269 96 19 chr2 211357165 211357217 -39330637 + MIR3 SINE MIR 13 68 -140 192 209 70 0 chr2 211357513 211357556 -39330298 + MIR SINE MIR 215 260 -2 435 305 63 42 chr2 211358122 211358361 -39329493 - L2 LINE L2 -225 3047 2804 355 301 74 42 chr2 211359306 211359522 -39328332 - L2 LINE L2 -527 2787 2565 487 299 24 24 chr2 211359824 211359988 -39327866 + MIR SINE MIR 52 215 -47 204 40 0 0 chr2 211362165 211362190 -39325664 + (CATA)n Simple_repeat Simple_repeat 3 27 0 1001 288 69 28 chr2 211362244 211362681 -39325173 - Tigger8 DNA MER2_type -187 479 25 2549 256 190 20 chr2 211363819 211365227 -39322627 + L2 LINE L2 1662 3304 -9 463 255 100 42 chr2 211365773 211366012 -39321842 - HAL1 LINE L1 -117 2390 2138 257 260 0 26 chr2 211366021 211366098 -39321756 + (TG)n Simple_repeat Simple_repeat 2 76 0 264 288 18 36 chr2 211366101 211366212 -39321642 + GA-rich Low_complexity Low_complexity 4 112 0 831 272 139 10 chr2 211367471 211367772 -39320082 - L2 LINE L2 -1 3312 2973 298 169 68 0 chr2 211367807 211367866 -39319988 - L2 LINE L2 -456 2858 2796 948 242 64 74 chr2 211367869 211368262 -39319592 + MLT1D LTR MaLR 3 391 -114 369 188 62 0 chr2 211368386 211368466 -39319388 + MLT1D LTR MaLR 418 502 -3 494 238 145 23 chr2 211368468 211368771 -39319083 - L2 LINE L2 -520 2794 2455 2170 103 4 0 chr2 211369976 211370257 -39317597 + AluSq SINE Alu 1 282 -31 212 0 36 0 chr2 211370260 211370288 -39317566 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 270 352 0 0 chr2 211372162 211372267 -39315587 + L1M4 LINE L1 3739 3843 -2303 1619 126 71 0 chr2 211372270 211372509 -39315345 + AluSc SINE Alu 1 256 -53 430 322 44 11 chr2 211372822 211373002 -39314852 + MIR SINE MIR 3 188 -74 234 194 16 32 chr2 211373902 211373964 -39313890 + (TA)n Simple_repeat Simple_repeat 2 62 0 2373 71 0 32 chr2 211373970 211374280 -39313574 - AluY SINE Alu -11 300 1 218 284 0 0 chr2 211374364 211374431 -39313423 + A-rich Low_complexity Low_complexity 1 67 0 390 252 36 65 chr2 211375365 211375504 -39312350 + MIR3 SINE MIR 3 137 -71 737 310 57 4 chr2 211378134 211378363 -39309491 - MIR SINE MIR -8 254 14 1203 181 246 4 chr2 211379006 211379283 -39308571 - MER2 DNA MER2_type -1 344 1 27 0 0 0 chr2 211379483 211379510 -39308344 + AT_rich Low_complexity Low_complexity 1 27 0 1665 253 68 55 chr2 211381041 211381567 -39306287 + MLT1H LTR MaLR 1 533 -16 1971 138 70 17 chr2 211382295 211382651 -39305203 - THE1C LTR MaLR 0 375 1 360 189 9 18 chr2 211383297 211383408 -39304446 + (TA)n Simple_repeat Simple_repeat 2 111 0 2535 165 117 47 chr2 211384731 211385678 -39302176 - MER106B DNA MER1_type 0 1059 1 189 317 132 77 chr2 211385693 211386680 -39301174 + L2 LINE L2 1698 2738 -576 1415 120 0 19 chr2 211387360 211387576 -39300278 - AluSq SINE Alu -76 237 26 638 186 8 8 chr2 211387705 211387823 -39300031 - FLAM_A SINE Alu -15 118 1 271 302 191 8 chr2 211387918 211388044 -39299810 + L2 LINE L2 3121 3269 -3 1829 140 32 7 chr2 211388755 211389060 -39298794 + AluSq SINE Alu 1 312 0 455 258 41 5 chr2 211389379 211389541 -39298313 - L1M4 LINE L1 -2247 3899 3739 954 141 32 0 chr2 211389556 211389712 -39298142 - MLT1B LTR MaLR -43 347 187 1082 275 70 12 chr2 211389718 211390202 -39297652 - L1M4 LINE L1 -2414 3732 3221 277 238 12 38 chr2 211390637 211390717 -39297137 + L2 LINE L2 2206 2283 -1031 1100 214 51 34 chr2 211391029 211391380 -39296474 - L1M4 LINE L1 -872 5274 4918 245 298 192 0 chr2 211394078 211394182 -39293672 - L2 LINE L2 0 3313 3190 2123 132 0 10 chr2 211394705 211395015 -39292839 + AluSx SINE Alu 1 307 -5 2247 103 0 0 chr2 211395026 211395318 -39292536 + AluSx SINE Alu 1 292 -20 186 43 0 0 chr2 211396064 211396087 -39291767 + (CATATA)n Simple_repeat Simple_repeat 5 27 0 380 242 8 0 chr2 211396147 211396279 -39291575 + (CA)n Simple_repeat Simple_repeat 1 133 0 799 146 30 18 chr2 211396471 211396635 -39291219 + AluSq SINE Alu 2 167 -146 257 358 17 8 chr2 211397878 211397998 -39289856 - MIR SINE MIR -117 145 25 25 0 0 0 chr2 211398408 211398433 -39289421 + AT_rich Low_complexity Low_complexity 1 25 0 297 356 116 21 chr2 211399292 211399621 -39288233 + L2 LINE L2 2329 2688 -626 637 252 124 9 chr2 211399676 211399894 -39287960 + MIR SINE MIR 2 244 -18 402 296 43 9 chr2 211399949 211400064 -39287790 - MER5A DNA MER1_type -1 188 70 252 0 0 0 chr2 211400155 211400183 -39287671 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr2 211400724 211400745 -39287109 + AT_rich Low_complexity Low_complexity 1 21 0 653 259 68 10 chr2 211400783 211400988 -39286866 + L3b LINE CR1 1282 1498 -85 253 243 126 9 chr2 211401430 211401541 -39286313 - L2 LINE L2 -1 3312 3189 274 289 26 0 chr2 211402040 211402116 -39285738 - MER81 DNA DNA -36 78 1 2000 121 46 0 chr2 211404406 211404686 -39283168 + AluSx SINE Alu 1 293 -19 485 114 0 23 chr2 211404697 211404785 -39283069 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 600 189 0 23 chr2 211405825 211405957 -39281897 - L1MC4 LINE L1 0 8042 7914 282 116 0 0 chr2 211405957 211406000 -39281854 + (TC)n Simple_repeat Simple_repeat 1 43 0 2135 104 13 3 chr2 211407392 211407691 -39280163 - AluSc SINE Alu -7 302 1 188 231 108 100 chr2 211409817 211409947 -39277907 + L2 LINE L2 2924 3054 -218 252 0 0 0 chr2 211410009 211410037 -39277817 + (TAG)n Simple_repeat Simple_repeat 1 28 0 859 191 7 0 chr2 211410039 211410180 -39277674 - FRAM SINE Alu -34 142 1 729 233 31 45 chr2 211411884 211412107 -39275747 - MIR SINE MIR -15 247 28 369 299 40 28 chr2 211412121 211412298 -39275556 + MIR SINE MIR 65 243 -19 21 36 0 0 chr2 211413158 211413186 -39274668 + AT_rich Low_complexity Low_complexity 1 28 0 245 298 192 0 chr2 211413567 211413671 -39274183 - L2 LINE L2 0 3313 3190 2123 132 0 10 chr2 211414194 211414504 -39273350 + AluSx SINE Alu 1 307 -5 2270 99 0 0 chr2 211414515 211414807 -39273047 + AluSx SINE Alu 1 292 -20 23 0 0 0 chr2 211414807 211414830 -39273024 + AT_rich Low_complexity Low_complexity 1 23 0 380 242 8 0 chr2 211415637 211415769 -39272085 + (CA)n Simple_repeat Simple_repeat 1 133 0 2184 131 0 3 chr2 211415960 211416272 -39271582 + AluSx SINE Alu 1 311 -1 1439 137 9 9 chr2 211416292 211416511 -39271343 + AluSg SINE Alu 1 219 -91 189 0 0 0 chr2 211417878 211417899 -39269955 + (TG)n Simple_repeat Simple_repeat 2 22 0 556 253 69 71 chr2 211418915 211419264 -39268590 + L1MC4a LINE L1 5585 5951 -219 195 42 0 0 chr2 211422734 211422758 -39265096 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 201 244 0 0 chr2 211424333 211424374 -39263480 + CT-rich Low_complexity Low_complexity 2 42 0 419 241 130 12 chr2 211425786 211426002 -39261852 - MIR SINE MIR -16 246 9 189 147 0 0 chr2 211426063 211426097 -39261757 + (CA)n Simple_repeat Simple_repeat 1 34 0 214 175 0 0 chr2 211426422 211426462 -39261392 + GA-rich Low_complexity Low_complexity 1 40 0 258 156 0 0 chr2 211428861 211428906 -39258948 + (TGGA)n Simple_repeat Simple_repeat 3 47 0 395 242 121 16 chr2 211429009 211429133 -39258721 - MER91A DNA MER1_type -10 186 50 190 338 0 14 chr2 211429653 211429724 -39258130 - MIR SINE MIR -19 243 174 196 281 16 0 chr2 211429859 211429923 -39257931 - MIR SINE MIR -121 87 23 1265 198 5 0 chr2 211429927 211430149 -39257705 + MER58A DNA MER1_type 1 223 -1 366 61 0 0 chr2 211432354 211432403 -39255451 + (TG)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr2 211432435 211432456 -39255398 + AT_rich Low_complexity Low_complexity 1 21 0 249 33 0 0 chr2 211436521 211436551 -39251303 + (TG)n Simple_repeat Simple_repeat 2 31 0 303 330 108 38 chr2 211436929 211437114 -39250740 - L2 LINE L2 0 3272 3075 444 231 50 57 chr2 211439973 211440190 -39247664 - MIR SINE MIR -45 217 4 213 241 19 19 chr2 211441805 211441859 -39245995 - MIR SINE MIR -55 153 100 447 273 21 0 chr2 211441953 211442096 -39245758 + MIR SINE MIR 117 262 0 315 323 119 23 chr2 211442429 211442689 -39245165 - L3b LINE CR1 -88 1495 1211 510 220 105 68 chr2 211445245 211445436 -39242418 + MER3 DNA MER1_type 1 198 -11 183 204 0 0 chr2 211445864 211445908 -39241946 + A-rich Low_complexity Low_complexity 2 45 0 227 164 16 0 chr2 211447074 211447135 -39240719 + (CA)n Simple_repeat Simple_repeat 1 62 0 1763 223 40 16 chr2 211447797 211448223 -39239631 - MER63B DNA MER1_type 0 436 1 289 227 54 124 chr2 211452734 211452919 -39234935 - Charlie8 DNA MER1_type -2179 238 67 186 226 0 57 chr2 211453036 211453089 -39234765 - L2 LINE L2 -2 3311 3262 266 266 50 14 chr2 211454112 211454257 -39233597 + MIR SINE MIR 10 160 -48 334 282 114 0 chr2 211454286 211454417 -39233437 - MER112 DNA MER1_type -33 227 82 948 262 29 20 chr2 211454420 211454664 -39233190 - MIR SINE MIR -13 249 4 702 248 61 41 chr2 211457683 211457857 -39229997 + MIR SINE MIR 12 195 -67 2150 104 14 0 chr2 211457857 211458160 -39229694 + AluSx SINE Alu 1 307 0 702 248 61 41 chr2 211458160 211458230 -39229624 + MIR SINE MIR 195 262 0 969 274 36 4 chr2 211458836 211459084 -39228770 + MIR SINE MIR 4 259 -3 521 342 46 57 chr2 211459265 211459654 -39228200 + L2 LINE L2 2888 3272 0 572 301 62 16 chr2 211459915 211460108 -39227746 + MIR SINE MIR 14 215 -47 194 276 58 11 chr2 211460320 211460407 -39227447 + L2 LINE L2 2580 2670 -644 480 316 35 87 chr2 211460463 211460809 -39227045 + L2 LINE L2 2916 3242 -30 792 274 115 8 chr2 211460809 211461043 -39226811 + MIR SINE MIR 2 260 -2 194 205 0 0 chr2 211461049 211461088 -39226766 + L2 LINE L2 3275 3313 0 180 0 0 0 chr2 211462198 211462218 -39225636 + (A)n Simple_repeat Simple_repeat 1 20 0 291 197 49 16 chr2 211462553 211462614 -39225240 - MIR SINE MIR -90 172 110 297 75 0 0 chr2 211463480 211463520 -39224334 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 454 293 20 30 chr2 211464350 211464537 -39223317 + MIR3 SINE MIR 3 184 -24 2306 114 0 13 chr2 211465525 211465841 -39222013 - AluSx SINE Alu 0 312 1 196 82 82 0 chr2 211466384 211466445 -39221409 + (TA)n Simple_repeat Simple_repeat 1 66 0 213 94 0 0 chr2 211467698 211467730 -39220124 + (TA)n Simple_repeat Simple_repeat 1 32 0 185 283 50 0 chr2 211471059 211471119 -39216735 + L3 LINE CR1 615 677 -900 189 0 0 0 chr2 211471321 211471342 -39216512 + (CAGAG)n Simple_repeat Simple_repeat 3 23 0 252 0 0 0 chr2 211471930 211471958 -39215896 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 276 250 147 17 chr2 211475580 211475696 -39212158 + L2 LINE L2 3142 3272 0 2253 122 0 13 chr2 211476934 211477246 -39210608 + AluSx SINE Alu 1 308 -4 197 211 0 58 chr2 211477393 211477445 -39210409 + L2 LINE L2 3264 3312 -1 333 263 18 44 chr2 211477596 211477710 -39210144 - MIR3 SINE MIR -4 204 94 389 312 26 2 chr2 211478378 211478519 -39209335 - MIR SINE MIR -67 141 15 487 250 0 14 chr2 211478772 211478901 -39208953 - MIR SINE MIR -85 123 2 218 352 11 0 chr2 211479028 211479116 -39208738 - L3b LINE CR1 -254 1329 1241 366 23 0 0 chr2 211479688 211479731 -39208123 + (TG)n Simple_repeat Simple_repeat 1 43 0 231 36 0 0 chr2 211479730 211479758 -39208096 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 246 62 0 0 chr2 211481617 211481649 -39206205 + (A)n Simple_repeat Simple_repeat 1 32 0 2327 101 0 0 chr2 211482944 211483240 -39204614 - AluSq SINE Alu -16 297 2 591 297 45 20 chr2 211486040 211486242 -39201612 + MIR SINE MIR 56 262 0 693 236 60 88 chr2 211487567 211487817 -39200037 + MIR SINE MIR 20 262 0 209 250 0 0 chr2 211487822 211487866 -39199988 - MIR SINE MIR -108 154 111 516 276 89 59 chr2 211487919 211488426 -39199428 + L1ME4a LINE L1 5538 6059 -62 186 43 0 0 chr2 211488468 211488491 -39199363 + (CAT)n Simple_repeat Simple_repeat 3 25 0 195 368 0 11 chr2 211488495 211488582 -39199272 + MIR SINE MIR 164 249 -13 990 304 61 13 chr2 211490336 211490711 -39197143 + L2 LINE L2 2921 3313 0 706 275 72 19 chr2 211491439 211491646 -39196208 - MIR SINE MIR -14 248 31 550 319 42 11 chr2 211492335 211492526 -39195328 + MIR SINE MIR 66 262 0 273 256 0 51 chr2 211492841 211492919 -39194935 + MIR SINE MIR 189 262 0 194 264 55 100 chr2 211493862 211493972 -39193882 + MIR SINE MIR 56 160 -102 201 135 54 0 chr2 211495980 211496017 -39191837 + A-rich Low_complexity Low_complexity 3 41 0 517 228 239 11 chr2 211496125 211496305 -39191549 + MIR SINE MIR 42 262 0 213 182 0 0 chr2 211496477 211496510 -39191344 + polypyrimidine Low_complexity Low_complexity 3 35 0 320 277 84 61 chr2 211498104 211498317 -39189537 + L2 LINE L2 2896 3113 -159 599 280 81 34 chr2 211498343 211498579 -39189275 + MIR SINE MIR 6 252 -10 255 301 41 0 chr2 211499818 211499891 -39187963 - MIR SINE MIR -83 179 104 2098 92 0 11 chr2 211500343 211500626 -39187228 - AluSx SINE Alu -11 301 22 238 276 0 0 chr2 211501908 211501966 -39185888 + GA-rich Low_complexity Low_complexity 1 58 0 213 326 42 32 chr2 211502708 211502803 -39185051 - MIR SINE MIR -82 126 31 632 275 0 19 chr2 211503426 211503586 -39184268 + MIR SINE MIR 76 232 -30 297 0 0 0 chr2 211504555 211504588 -39183266 + (CA)n Simple_repeat Simple_repeat 2 34 0 22 35 0 0 chr2 211504938 211504967 -39182887 + AT_rich Low_complexity Low_complexity 1 29 0 204 274 0 48 chr2 211508267 211508329 -39179525 + MIR3 SINE MIR 103 161 -47 500 303 67 12 chr2 211508879 211509044 -39178810 + MIR3 SINE MIR 19 192 -16 1880 122 25 4 chr2 211511094 211511270 -39176584 - AluSx SINE Alu 0 309 123 459 0 0 0 chr2 211511270 211511321 -39176533 + (TG)n Simple_repeat Simple_repeat 2 52 0 1880 122 25 4 chr2 211511321 211511447 -39176407 - AluSx SINE Alu -186 123 1 209 340 10 10 chr2 211512142 211512242 -39175612 + GA-rich Low_complexity Low_complexity 1 100 0 598 215 103 56 chr2 211512477 211512672 -39175182 - MIR SINE MIR -24 238 35 229 0 83 0 chr2 211513026 211513062 -39174792 + T-rich Low_complexity Low_complexity 2 40 0 189 0 0 0 chr2 211515661 211515682 -39172172 + (GGA)n Simple_repeat Simple_repeat 3 23 0 309 26 0 0 chr2 211518307 211518345 -39169509 + (CA)n Simple_repeat Simple_repeat 2 39 0 183 80 0 0 chr2 211518954 211518979 -39168875 + (TAA)n Simple_repeat Simple_repeat 1 25 0 207 69 0 0 chr2 211519221 211519250 -39168604 + (CTG)n Simple_repeat Simple_repeat 3 31 0 265 152 45 0 chr2 211520981 211521047 -39166807 + CT-rich Low_complexity Low_complexity 4 72 0 501 292 16 32 chr2 211522475 211522660 -39165194 - MER5A DNA MER1_type -7 182 1 631 207 168 0 chr2 211523879 211524058 -39163796 + MER3 DNA MER1_type 1 209 0 226 311 49 33 chr2 211524450 211524572 -39163282 + MIR3 SINE MIR 78 201 -7 24 53 0 0 chr2 211525498 211525536 -39162318 + AT_rich Low_complexity Low_complexity 1 38 0 207 283 0 60 chr2 211525804 211525970 -39161884 + A-rich Low_complexity Low_complexity 5 160 0 216 86 0 0 chr2 211526057 211526092 -39161762 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 2194 110 3 0 chr2 211527595 211527903 -39159951 + AluSx SINE Alu 1 309 -3 221 363 108 10 chr2 211528015 211528117 -39159737 + MIR SINE MIR 36 147 -61 276 288 65 43 chr2 211528211 211528395 -39159459 - L2 LINE L2 -12 3301 3114 235 239 177 35 chr2 211528403 211528516 -39159338 + MIR SINE MIR 20 148 -60 332 237 237 29 chr2 211528533 211528706 -39159148 - MER112 DNA MER1_type -4 256 48 215 338 13 0 chr2 211528924 211529001 -39158853 + L2 LINE L2 3194 3271 -1 21 0 0 0 chr2 211529501 211529522 -39158332 + AT_rich Low_complexity Low_complexity 1 21 0 234 300 0 14 chr2 211530981 211531051 -39156803 - MIR SINE MIR -118 90 22 25 0 0 0 chr2 211531223 211531248 -39156606 + AT_rich Low_complexity Low_complexity 1 25 0 3847 161 56 50 chr2 211531671 211532551 -39155303 + L1 LINE L1 2829 3713 -2433 4113 132 5 11 chr2 211532740 211533383 -39154471 - L1PA16 LINE L1 -1 6165 5527 833 128 0 32 chr2 211533514 211533639 -39154215 + FLAM_C SINE Alu 4 124 -19 473 76 0 43 chr2 211533677 211533769 -39154085 + (TTCC)n Simple_repeat Simple_repeat 1 88 0 1615 168 4 7 chr2 211533769 211534043 -39153811 - AluJo SINE Alu -28 284 12 449 194 63 74 chr2 211534191 211534366 -39153488 + MLT1I LTR MaLR 220 392 -17 189 299 92 43 chr2 211534658 211534822 -39153032 + MIR SINE MIR 20 191 -71 264 326 145 6 chr2 211535894 211536066 -39151788 - MIR SINE MIR -65 197 2 337 261 92 60 chr2 211536337 211536555 -39151299 - L1ME4a LINE L1 -3 6118 5894 24 53 0 0 chr2 211536751 211536789 -39151065 + AT_rich Low_complexity Low_complexity 1 38 0 1211 125 62 5 chr2 211536859 211537027 -39150827 - AluJb SINE Alu -7 305 121 533 42 14 0 chr2 211537027 211537099 -39150755 + (TA)n Simple_repeat Simple_repeat 1 73 0 1211 125 62 5 chr2 211537099 211537138 -39150716 - AluJb SINE Alu -191 121 86 349 301 59 27 chr2 211537140 211537326 -39150528 - L1ME4a LINE L1 -296 5825 5634 3653 113 9 30 chr2 211539043 211539581 -39148273 - MER1A DNA MER1_type 0 527 1 1854 139 3 45 chr2 211539607 211539917 -39147937 + AluJb SINE Alu 1 297 -15 2181 108 0 0 chr2 211541108 211541415 -39146439 - AluSx SINE Alu 0 312 6 889 283 14 25 chr2 211541436 211541807 -39146047 - L1ME LINE L1 -379 5783 5420 207 314 223 0 chr2 211541884 211542005 -39145849 - MIR SINE MIR -4 258 111 1090 65 0 49 chr2 211542115 211542490 -39145364 + (TCCC)n Simple_repeat Simple_repeat 1 356 0 451 237 38 11 chr2 211542519 211542676 -39145178 - AluJb SINE Alu 0 312 119 459 0 0 0 chr2 211542676 211542727 -39145127 + (TG)n Simple_repeat Simple_repeat 2 52 0 451 237 38 11 chr2 211542727 211542783 -39145071 - AluJb SINE Alu -193 119 66 270 361 65 0 chr2 211542939 211543047 -39144807 + L2 LINE L2 3112 3226 -46 1745 159 0 7 chr2 211543284 211543585 -39144269 - AluJb SINE Alu -13 299 1 335 238 12 0 chr2 211543607 211543691 -39144163 - MIR SINE MIR -111 151 67 1582 199 137 34 chr2 211544292 211544700 -39143154 - MLT2B1 LTR ERVL -50 470 21 360 271 71 29 chr2 211544742 211544882 -39142972 + L3 LINE CR1 1430 1575 -2 1772 148 14 7 chr2 211545067 211545364 -39142490 - AluJo SINE Alu -13 299 1 28 0 0 0 chr2 211545795 211545823 -39142031 + AT_rich Low_complexity Low_complexity 1 28 0 326 238 62 12 chr2 211546285 211546365 -39141489 + MER5B DNA MER1_type 3 86 -92 705 168 0 16 chr2 211546391 211546516 -39141338 + FLAM_C SINE Alu 1 123 -20 207 0 0 0 chr2 211546516 211546539 -39141315 + (CTA)n Simple_repeat Simple_repeat 1 23 0 218 208 21 0 chr2 211546587 211546635 -39141219 + MER5B DNA MER1_type 83 131 -47 1937 139 52 3 chr2 211546641 211546929 -39140925 - AluSx SINE Alu -8 304 3 277 291 228 11 chr2 211547136 211547325 -39140529 - MIR SINE MIR -7 255 26 860 320 33 7 chr2 211547325 211547628 -39140226 - HERV16 LTR ERVL -2363 2633 2323 1102 205 107 3 chr2 211547630 211547977 -39139877 - Charlie5 DNA MER1_type 0 2624 2242 2439 65 14 0 chr2 211547988 211548281 -39139573 - AluSp SINE Alu -16 297 1 439 182 127 0 chr2 211548291 211548323 -39139531 - Charlie5 DNA MER1_type -2500 124 97 2198 129 7 0 chr2 211548323 211548626 -39139228 + AluSq SINE Alu 1 305 -8 439 182 127 0 chr2 211548626 211548703 -39139151 - Charlie5 DNA MER1_type -2527 97 1 331 356 30 30 chr2 211548792 211548927 -39138927 - HERV16 LTR ERVL -3510 2254 2117 3774 114 125 7 chr2 211548927 211549542 -39138312 + LTR12 LTR ERV1 1 688 0 331 356 30 30 chr2 211549542 211549608 -39138246 - HERV16 LTR ERVL -3646 2118 2053 2367 301 74 20 chr2 211549616 211550853 -39137001 - HERV16 LTR ERVL -3427 1569 598 1495 216 3 10 chr2 211551100 211551392 -39136462 + Tigger7 DNA MER2_type 1 290 -2197 621 177 0 0 chr2 211551368 211551464 -39136390 + Tigger7 DNA MER2_type 2396 2491 0 * 283 282 64 36 chr2 211551722 211551832 -39136022 + LTR16A LTR ERVL 1 113 -337 368 290 43 63 chr2 211551879 211552086 -39135768 - HERV16 LTR ERVL -4754 242 40 836 245 72 40 chr2 211552121 211552503 -39135351 - LTR16A LTR ERVL 0 450 3 183 256 51 131 chr2 211552610 211552747 -39135107 + L2 LINE L2 3136 3261 -11 239 323 62 10 chr2 211552875 211552971 -39134883 - L2 LINE L2 -4 3268 3168 1077 174 5 38 chr2 211553334 211553546 -39134308 - MER3 DNA MER1_type 0 209 5 513 120 0 0 chr2 211553764 211553856 -39133998 + (TCCA)n Simple_repeat Simple_repeat 2 93 0 254 305 54 58 chr2 211554029 211554288 -39133566 - L2 LINE L2 -181 3091 2834 707 190 0 0 chr2 211555709 211555830 -39132024 + FLAM_C SINE Alu 4 124 -19 1605 176 20 17 chr2 211555846 211556148 -39131706 + AluJb SINE Alu 1 303 -9 324 318 55 0 chr2 211556384 211556494 -39131360 - L2 LINE L2 -46 3226 3111 2944 3 0 0 chr2 211556847 211557158 -39130696 - AluYa5 SINE Alu 0 311 1 581 217 21 14 chr2 211557840 211557983 -39129871 - MER103 DNA DNA -1 165 22 1145 236 50 128 chr2 211558269 211558909 -39128945 - MLT1G LTR MaLR 0 590 1 314 59 0 0 chr2 211559440 211559485 -39128369 + MADE1 DNA Mariner 41 80 0 2248 93 0 17 chr2 211559575 211559876 -39127978 - AluSx SINE Alu -16 296 1 1636 233 143 29 chr2 211560415 211560664 -39127190 - MER20B DNA MER1_type -2 781 562 2215 128 3 6 chr2 211560664 211560977 -39126877 + AluSx SINE Alu 1 312 0 1636 233 143 29 chr2 211560977 211561085 -39126769 - MER20B DNA MER1_type -221 562 468 2846 184 29 12 chr2 211561085 211561665 -39126189 + L1MB5 LINE L1 5585 6174 0 2238 99 3 10 chr2 211561669 211561971 -39125883 + AluSx SINE Alu 1 300 -12 1636 233 143 29 chr2 211561971 211562200 -39125654 - MER20B DNA MER1_type -317 466 121 221 273 15 30 chr2 211563788 211563854 -39124000 - L2 LINE L2 -2 3270 3206 453 275 60 33 chr2 211563894 211564076 -39123778 + MER5A DNA MER1_type 3 189 0 189 0 0 0 chr2 211565989 211566010 -39121844 + (T)n Simple_repeat Simple_repeat 1 21 0 2210 116 3 0 chr2 211566372 211566673 -39121181 - AluSq SINE Alu -11 302 1 2326 93 7 0 chr2 211567254 211567555 -39120299 + AluSp SINE Alu 1 303 -10 2706 102 8 0 chr2 211568429 211568790 -39119064 + THE1B LTR MaLR 1 364 0 283 241 230 16 chr2 211569241 211569368 -39118486 + L1ME3A LINE L1 5507 5660 -510 2164 212 127 22 chr2 211569368 211569905 -39117949 + MLT1E LTR MaLR 1 593 0 1555 209 50 34 chr2 211569906 211570322 -39117532 + L1ME3A LINE L1 5657 6079 -91 345 326 8 0 chr2 211570471 211570603 -39117251 - MIR3 SINE MIR -34 174 42 292 266 64 0 chr2 211572298 211572392 -39115462 + MLT1J2 LTR MaLR 65 164 -286 469 303 37 5 chr2 211573140 211573328 -39114526 - MER117 DNA MER1_type 0 197 4 225 286 0 0 chr2 211573617 211573673 -39114181 - L2 LINE L2 -11 3261 3206 194 146 0 24 chr2 211573725 211573766 -39114088 + (TCTCCC)n Simple_repeat Simple_repeat 3 42 0 207 0 0 0 chr2 211574075 211574098 -39113756 + (A)n Simple_repeat Simple_repeat 1 23 0 2269 110 0 0 chr2 211575354 211575655 -39112199 - AluSx SINE Alu -11 301 1 190 256 111 11 chr2 211575768 211575858 -39111996 - MIR3 SINE MIR 0 208 110 2128 204 28 2 chr2 211575963 211576360 -39111494 - MER44D DNA MER2_type -143 462 1 2325 116 0 3 chr2 211576469 211576780 -39111074 + AluSg SINE Alu 1 310 0 376 241 11 11 chr2 211576798 211576885 -39110969 - MLT2F LTR ERVL -560 103 17 2529 62 0 7 chr2 211576931 211577239 -39110615 - AluY SINE Alu -5 306 1 878 291 25 21 chr2 211577261 211577587 -39110267 - L1ME3A LINE L1 -231 5939 5613 1026 288 107 39 chr2 211577628 211578758 -39109096 - L1ME3A LINE L1 -903 5243 4020 1850 158 3 14 chr2 211578758 211579055 -39108799 - AluSx SINE Alu -18 294 1 1026 288 107 39 chr2 211579055 211579131 -39108723 - L1ME3A LINE L1 -2126 4020 3951 1201 171 28 24 chr2 211579143 211579395 -39108459 - L1MB4 LINE L1 -1 6179 5927 996 117 33 5 chr2 211579398 211579612 -39108242 + CT-rich Low_complexity Low_complexity 1 219 0 529 60 0 36 chr2 211579612 211579696 -39108158 + (TCCC)n Simple_repeat Simple_repeat 2 82 0 557 241 0 0 chr2 211579697 211579809 -39108045 - FLAM_C SINE Alu -30 113 2 1365 136 20 17 chr2 211579809 211580073 -39107781 - L1MB4 LINE L1 -228 6747 6486 2222 236 119 35 chr2 211580147 211580965 -39106889 + HAL1 LINE L1 1621 2506 -1 2604 59 3 0 chr2 211580971 211581276 -39106578 + AluY SINE Alu 1 306 -5 7454 225 71 72 chr2 211581281 211581607 -39106247 - L1MB4 LINE L1 -854 6103 5778 2229 183 38 14 chr2 211581607 211582029 -39105825 + MSTB1 LTR MaLR 1 432 0 7454 225 71 72 chr2 211582029 211583528 -39104326 - L1MB4 LINE L1 -1179 5778 4279 2302 120 19 27 chr2 211583528 211583895 -39103959 + THE1B LTR MaLR 1 364 0 7454 225 71 72 chr2 211583895 211585452 -39102402 - L1MB4 LINE L1 -2678 4279 2773 236 216 14 81 chr2 211585457 211585531 -39102323 - L1MB4 LINE L1 -6775 84 16 2520 64 0 19 chr2 211586225 211586538 -39101316 - AluY SINE Alu -4 307 1 559 239 41 81 chr2 211586588 211586785 -39101069 + MER5A DNA MER1_type 1 189 0 360 217 0 0 chr2 211587684 211587776 -39100078 + (TA)n Simple_repeat Simple_repeat 2 93 0 3340 84 34 0 chr2 211589991 211590429 -39097425 - MLT2A2 LTR ERVL 0 453 1 2108 138 0 10 chr2 211590490 211590787 -39097067 - AluSx SINE Alu -17 295 2 1485 239 87 49 chr2 211591433 211591961 -39095893 + MLT1H LTR MaLR 2 549 0 1914 158 55 15 chr2 211592401 211592731 -39095123 - MER61A LTR ERV1 0 343 1 301 258 7 7 chr2 211593025 211593136 -39094718 - MIR SINE MIR -63 145 45 22 0 0 0 chr2 211593288 211593310 -39094544 + AT_rich Low_complexity Low_complexity 1 22 0 2104 138 0 3 chr2 211593423 211593721 -39094133 - AluSx SINE Alu -15 297 1 2055 131 7 0 chr2 211594755 211595075 -39092779 - AluSx SINE Alu 0 312 1 907 241 75 28 chr2 211597025 211597237 -39090617 + MLT1J2 LTR MaLR 1 222 -228 572 257 114 64 chr2 211597562 211597808 -39090046 + MLT1H LTR MaLR 1 274 -275 2695 115 0 6 chr2 211597808 211598174 -39089680 - THE1B LTR MaLR 0 364 1 572 257 114 64 chr2 211598174 211598304 -39089550 + MLT1H LTR MaLR 274 396 -153 911 226 0 0 chr2 211598368 211598536 -39089318 - AluJ SINE Alu -14 298 131 540 181 15 15 chr2 211598536 211598669 -39089185 + CT-rich Low_complexity Low_complexity 3 135 0 874 149 0 0 chr2 211598669 211598790 -39089064 - AluJ SINE Alu -191 121 1 4472 162 57 22 chr2 211598798 211599778 -39088076 - L1MB5 LINE L1 0 6174 5151 2285 104 3 0 chr2 211599778 211600076 -39087778 - AluSx SINE Alu -13 299 1 4472 162 57 22 chr2 211600076 211600190 -39087664 - L1MB5 LINE L1 -1023 5151 5042 272 117 0 33 chr2 211600190 211600250 -39087604 + (TTTC)n Simple_repeat Simple_repeat 1 58 0 1960 144 4 0 chr2 211600250 211600527 -39087327 - AluSx SINE Alu -34 278 1 510 214 7 84 chr2 211600529 211600683 -39087171 - L1MB5 LINE L1 -1090 5056 4915 562 284 12 0 chr2 211601253 211601415 -39086439 + MIR SINE MIR 94 257 -5 1099 269 43 89 chr2 211602675 211603194 -39084660 - L1MC4a LINE L1 -1710 6098 5609 2042 147 0 0 chr2 211603194 211603480 -39084374 - AluSx SINE Alu -26 286 1 1099 269 43 89 chr2 211603480 211603567 -39084287 - L1MC4a LINE L1 -2199 5609 5520 234 62 0 0 chr2 211603584 211603616 -39084238 + (TG)n Simple_repeat Simple_repeat 1 32 0 188 35 35 0 chr2 211603616 211603645 -39084209 + (GA)n Simple_repeat Simple_repeat 2 31 0 189 268 49 0 chr2 211603950 211603991 -39083863 - L2 LINE L2 -22 3291 3249 2344 69 3 33 chr2 211604503 211604808 -39083046 + AluY SINE Alu 1 296 -15 654 113 0 0 chr2 211604808 211604932 -39082922 + (TA)n Simple_repeat Simple_repeat 2 125 0 382 270 0 0 chr2 211605109 211605183 -39082671 + LTR67 LTR ERVL 104 177 -380 246 241 24 24 chr2 211605596 211605679 -39082175 - LTR33A LTR ERVL -7 516 434 467 192 20 10 chr2 211605684 211605783 -39082071 + MER102b DNA MER1_type 193 292 -49 670 340 97 12 chr2 211605978 211606461 -39081393 + L2 LINE L2 2138 2661 -653 285 211 0 18 chr2 211606558 211606615 -39081239 + L2 LINE L2 3242 3297 -16 547 333 52 9 chr2 211606751 211606961 -39080893 - LTR67 LTR ERVL -8 549 331 350 208 42 42 chr2 211607008 211607080 -39080774 - LTR67 LTR ERVL -382 175 104 486 208 188 0 chr2 211608943 211609092 -39078762 - MIR SINE MIR 0 262 86 22 35 0 0 chr2 211609759 211609788 -39078066 + AT_rich Low_complexity Low_complexity 1 29 0 372 228 71 24 chr2 211610047 211610174 -39077680 + MER5A DNA MER1_type 56 188 -1 2153 91 0 7 chr2 211610216 211610491 -39077363 + AluSq SINE Alu 11 283 -30 537 311 131 0 chr2 211612374 211612596 -39075258 + MIR SINE MIR 12 262 0 2213 129 78 39 chr2 211612621 211613033 -39074821 + MSTA LTR MaLR 1 428 0 23 0 0 0 chr2 211613538 211613561 -39074293 + AT_rich Low_complexity Low_complexity 1 23 0 605 253 93 0 chr2 211613737 211613887 -39073967 + MER45A DNA AcHobo 1 164 -14 286 308 34 0 chr2 211613902 211614019 -39073835 - L1MC4a LINE L1 -1896 5912 5792 304 128 0 0 chr2 211615871 211615918 -39071936 - L1MB7 LINE L1 -8 6176 6130 1203 112 0 0 chr2 211616610 211616779 -39071075 + AluSg/x SINE Alu 137 305 -7 353 256 158 18 chr2 211619203 211619328 -39068526 - MER53 DNA DNA 0 189 34 3156 169 31 5 chr2 211619328 211619913 -39067941 - L1MB4 LINE L1 -6 6174 5575 353 256 158 18 chr2 211619913 211619951 -39067903 - MER53 DNA DNA -155 34 3 212 155 119 83 chr2 211620213 211620297 -39067557 - L2 LINE L2 0 3272 3186 375 265 80 12 chr2 211620918 211621080 -39066774 - MIR3 SINE MIR -14 194 22 426 53 0 0 chr2 211621941 211621998 -39065856 + (CA)n Simple_repeat Simple_repeat 1 57 0 662 213 14 14 chr2 211623486 211623627 -39064227 - MLT1A2 LTR MaLR -221 153 13 923 211 5 21 chr2 211623643 211623833 -39064021 - MER5A DNA MER1_type 0 189 3 528 192 0 104 chr2 211624110 211624152 -39063702 + MER81 DNA DNA 2 47 -67 1699 182 10 55 chr2 211624152 211624537 -39063317 + MLT1A2 LTR MaLR 4 371 -3 528 192 0 104 chr2 211624537 211624554 -39063300 + MER81 DNA DNA 47 64 -50 2400 220 88 62 chr2 211624554 211625359 -39062495 + LTR1B LTR ERV1 1 826 0 528 192 0 104 chr2 211625359 211625423 -39062431 + MER81 DNA DNA 64 113 -1 180 0 0 0 chr2 211625463 211625483 -39062371 + (A)n Simple_repeat Simple_repeat 1 20 0 330 216 0 0 chr2 211627165 211627239 -39060615 + (TG)n Simple_repeat Simple_repeat 2 75 0 186 133 0 0 chr2 211627647 211627677 -39060177 + (TATG)n Simple_repeat Simple_repeat 2 31 0 270 0 0 0 chr2 211628241 211628271 -39059583 + (TAA)n Simple_repeat Simple_repeat 3 32 0 1062 230 21 4 chr2 211628967 211629202 -39058652 + MIR SINE MIR 8 246 -16 2596 25 0 0 chr2 211629223 211629531 -39058323 + AluY SINE Alu 1 308 0 1632 144 71 91 chr2 211629776 211630171 -39057683 + MLT1B LTR MaLR 1 387 -3 344 299 23 61 chr2 211630232 211630409 -39057445 - MIR SINE MIR -66 142 15 345 24 0 0 chr2 211635853 211635877 -39051977 + (CA)n Simple_repeat Simple_repeat 1 66 0 345 24 0 0 chr2 211635877 211635919 -39051935 + (CA)n Simple_repeat Simple_repeat 2 43 0 206 189 38 0 chr2 211636451 211636504 -39051350 + MIR SINE MIR 90 144 -64 182 313 36 12 chr2 211637808 211637891 -39049963 + L3b LINE CR1 1175 1259 -324 1420 197 27 20 chr2 211638747 211639046 -39048808 - AluJb SINE Alu -11 301 1 349 268 52 59 chr2 211640787 211640940 -39046914 - MIR3 SINE MIR -10 198 47 334 270 63 0 chr2 211641031 211641142 -39046712 + L2 LINE L2 3195 3312 -1 1975 108 7 0 chr2 211641189 211641458 -39046396 + AluSx SINE Alu 1 271 -41 329 268 68 64 chr2 211641505 211641725 -39046129 + L2 LINE L2 3003 3223 -90 5979 81 7 5 chr2 211641733 211642547 -39045307 + L1PB1 LINE L1 5334 6149 -2 284 310 0 0 chr2 211642566 211642653 -39045201 + L2 LINE L2 3221 3307 -6 209 326 51 0 chr2 211643008 211643106 -39044748 - MIR3 SINE MIR -20 188 86 239 265 159 45 chr2 211644306 211644438 -39043416 + L2 LINE L2 3121 3267 -5 509 144 52 10 chr2 211644454 211644551 -39043303 - L1MB4 LINE L1 0 6180 6080 2288 119 0 0 chr2 211644559 211644862 -39042992 - AluY SINE Alu -8 303 1 1978 154 3 0 chr2 211644880 211645179 -39042675 + AluJo SINE Alu 6 305 -7 239 323 65 0 chr2 211645378 211645471 -39042383 - L2 LINE L2 -37 3235 3137 411 309 0 27 chr2 211645471 211645620 -39042234 + L2 LINE L2 3169 3313 0 2075 166 22 11 chr2 211645900 211646261 -39041593 + MLT1A1 LTR MaLR 1 365 0 2237 129 33 33 chr2 211646534 211646898 -39040956 + THE1B LTR MaLR 1 364 0 903 281 96 42 chr2 211646948 211647325 -39040529 - LTR16C LTR ERVL -2 489 93 319 245 66 112 chr2 211647479 211647675 -39040179 + MLT1J2 LTR MaLR 2 188 -262 2380 79 0 0 chr2 211647676 211647981 -39039873 + AluY SINE Alu 1 305 -6 842 115 4 179 chr2 211647991 211648225 -39039629 + 7SK RNA RNA 1 193 0 1916 127 3 3 chr2 211648313 211648630 -39039224 - AluSx SINE Alu 0 317 1 489 268 71 49 chr2 211648720 211648903 -39038951 + MLT1J2 LTR MaLR 264 450 0 1975 130 7 0 chr2 211650548 211650840 -39037014 - AluSx SINE Alu -13 299 6 1219 169 69 59 chr2 211650947 211651237 -39036617 - AluJo SINE Alu -19 293 1 205 328 116 78 chr2 211651505 211651737 -39036117 + L2 LINE L2 3017 3257 -15 672 203 29 0 chr2 211652291 211652307 -39035547 - L1MA10 LINE L1 -1 6333 6318 1200 216 35 44 chr2 211652307 211652645 -39035209 - L1ME2 LINE L1 -9 6155 5821 2281 79 0 3 chr2 211653392 211653696 -39034158 + AluY SINE Alu 1 303 -8 353 221 158 11 chr2 211654777 211654872 -39032982 - MIR SINE MIR -139 123 15 180 111 0 0 chr2 211654945 211654972 -39032882 + (TATATG)n Simple_repeat Simple_repeat 3 29 0 1884 226 78 19 chr2 211655025 211655502 -39032352 - MLT1D LTR MaLR 0 505 1 430 264 146 14 chr2 211657861 211658005 -39029849 - MER91A DNA MER1_type -22 174 12 218 235 206 29 chr2 211658474 211658542 -39029312 - MIR SINE MIR -176 86 7 505 193 74 51 chr2 211659338 211659514 -39028340 - Charlie2a DNA MER1_type -1211 1651 1472 499 191 59 44 chr2 211659546 211659562 -39028292 - Charlie2b DNA MER1_type -2090 692 678 558 67 0 0 chr2 211659562 211659637 -39028217 + (TGGA)n Simple_repeat Simple_repeat 3 77 0 499 191 59 44 chr2 211659637 211659756 -39028098 - Charlie2b DNA MER1_type -2104 678 555 * 674 278 110 33 chr2 211659735 211660034 -39027820 - Charlie2b DNA MER1_type -2535 327 6 2132 123 7 0 chr2 211660472 211660781 -39027073 + AluSx SINE Alu 1 311 -1 252 143 0 0 chr2 211660994 211661036 -39026818 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 2128 177 54 50 chr2 211662947 211663450 -39024404 - MLT1D LTR MaLR 0 505 1 1717 164 7 4 chr2 211663613 211663924 -39023930 + AluJo SINE Alu 1 312 0 1449 141 48 59 chr2 211663934 211664224 -39023630 + AluJb SINE Alu 1 287 -25 183 42 0 0 chr2 211664227 211664251 -39023603 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1784 152 18 12 chr2 211664254 211664582 -39023272 + L1MC1 LINE L1 5989 6318 -15 345 140 0 0 chr2 211664583 211664640 -39023214 + (CA)n Simple_repeat Simple_repeat 2 58 0 1848 147 0 0 chr2 211664646 211664932 -39022922 - AluJb SINE Alu -26 286 1 453 261 189 13 chr2 211664978 211665131 -39022723 - MER5A DNA MER1_type -6 183 4 2074 115 86 9 chr2 211666281 211666629 -39021225 + THE1C LTR MaLR 1 375 0 1050 136 11 23 chr2 211666688 211666865 -39020989 + LTR9 LTR ERV1 438 612 0 3310 115 19 63 chr2 211666880 211667420 -39020434 + HUERS-P3 LTR ERV1 15 530 -8389 864 148 12 35 chr2 211667420 211667589 -39020265 + LTR9 LTR ERV1 367 531 -81 524 15 15 0 chr2 211667593 211667658 -39020196 + (GAAA)n Simple_repeat Simple_repeat 4 69 0 678 239 158 27 chr2 211667948 211668170 -39019684 + MIR SINE MIR 9 259 -3 213 298 96 0 chr2 211668910 211669004 -39018850 + MIR SINE MIR 121 223 -39 245 269 54 11 chr2 211669172 211669265 -39018589 - MIR3 SINE MIR -54 154 58 366 283 49 94 chr2 211669402 211669625 -39018229 - MIR SINE MIR -31 231 19 1884 138 0 7 chr2 211669846 211670135 -39017719 - AluSx SINE Alu -25 287 1 1079 137 6 0 chr2 211671702 211671870 -39015984 - AluSg/x SINE Alu -13 297 129 1619 107 77 8 chr2 211672515 211672776 -39015078 + AluJb SINE Alu 1 279 -33 252 200 211 89 chr2 211672809 211672899 -39014955 - MIR SINE MIR -70 192 92 213 64 0 64 chr2 211672969 211673016 -39014838 + (TTCC)n Simple_repeat Simple_repeat 3 46 0 424 312 58 26 chr2 211676003 211676157 -39011697 + MIR3 SINE MIR 46 204 -4 847 143 0 29 chr2 211676178 211676318 -39011536 - AluJo SINE Alu -176 136 1 27 29 0 0 chr2 211676874 211676908 -39010946 + AT_rich Low_complexity Low_complexity 1 34 0 531 141 98 0 chr2 211678540 211678632 -39009222 - MER58A DNA MER1_type -3 221 121 4723 82 9 26 chr2 211678633 211679278 -39008576 - MER51A LTR ERV1 0 634 1 3282 101 19 72 chr2 211679279 211679710 -39008144 + MER41B LTR ERV1 1 498 -137 1777 129 21 7 chr2 211679710 211679997 -39007857 - AluJb SINE Alu -7 305 15 3282 101 19 72 chr2 211679997 211680129 -39007725 + MER41B LTR ERV1 498 635 0 552 200 15 82 chr2 211680129 211680215 -39007639 - MER58A DNA MER1_type -215 126 51 1891 169 77 6 chr2 211680215 211680552 -39007302 + MLT1A1 LTR MaLR 5 365 0 552 200 15 82 chr2 211680552 211680600 -39007254 - MER58A DNA MER1_type -290 51 1 262 400 24 0 chr2 211680601 211680726 -39007128 + L2 LINE L2 2441 2568 -746 594 214 40 20 chr2 211680855 211681056 -39006798 - HsTC2a DNA Tc2 0 742 538 2843 160 128 18 chr2 211681082 211681694 -39006160 + LTR48 LTR ERV1 108 786 -1 1183 230 42 44 chr2 211681694 211682045 -39005809 - HsTC2a DNA Tc2 -279 465 116 189 0 0 0 chr2 211682091 211682112 -39005742 + (TA)n Simple_repeat Simple_repeat 1 21 0 2075 129 0 0 chr2 211682274 211682577 -39005277 + AluSq SINE Alu 1 303 -10 2167 111 0 16 chr2 211683087 211683403 -39004451 + AluSx SINE Alu 1 311 -1 25 51 0 0 chr2 211685279 211685318 -39002536 + AT_rich Low_complexity Low_complexity 1 39 0 1397 153 84 114 chr2 211685370 211685834 -39002020 - LTR7 LTR ERV1 0 450 1 3534 123 95 22 chr2 211686440 211686528 -39001326 - LTR9B LTR ERV1 0 644 564 6149 54 32 3 chr2 211686528 211687286 -39000568 + LTR17 LTR ERV1 1 780 0 3534 123 95 22 chr2 211687286 211687732 -39000122 - LTR9B LTR ERV1 -80 564 59 2574 42 0 0 chr2 211687732 211688043 -38999811 + AluY SINE Alu 1 311 0 3534 123 95 22 chr2 211688043 211688107 -38999747 - LTR9B LTR ERV1 -585 59 1 1383 181 30 102 chr2 211688272 211688625 -38999229 - MLT1A2 LTR MaLR 0 374 52 2154 127 86 15 chr2 211688625 211688963 -38998891 + THE1B LTR MaLR 3 364 0 1383 181 30 102 chr2 211688963 211689012 -38998842 - MLT1A2 LTR MaLR -322 52 1 1173 191 0 9 chr2 211689069 211689289 -38998565 - AluJb SINE Alu -8 304 87 424 237 333 26 chr2 211689315 211689627 -38998227 - MLT1H LTR MaLR -120 429 22 1997 111 0 27 chr2 211689797 211690095 -38997759 + AluSg SINE Alu 1 290 -20 2237 106 0 0 chr2 211690221 211690522 -38997332 + AluSx SINE Alu 1 301 -11 2212 112 0 0 chr2 211691366 211691670 -38996184 + AluSx SINE Alu 1 304 -8 264 30 0 0 chr2 211691673 211691706 -38996148 + (CA)n Simple_repeat Simple_repeat 1 33 0 2258 108 0 0 chr2 211692579 211692884 -38994970 + AluSg SINE Alu 1 305 -5 1852 151 0 3 chr2 211694458 211694749 -38993105 + AluJb SINE Alu 1 290 -22 704 163 143 20 chr2 211695106 211695253 -38992601 + FRAM SINE Alu 1 156 -20 1560 152 33 15 chr2 211696101 211696371 -38991483 + AluJo SINE Alu 18 292 -20 1435 77 10 5 chr2 211696819 211697015 -38990839 + AluSx SINE Alu 1 197 -115 693 131 0 0 chr2 211697265 211697372 -38990482 + AluSc SINE Alu 200 306 -3 2015 155 0 0 chr2 211697748 211698044 -38989810 + AluJb SINE Alu 1 296 -16 228 143 48 0 chr2 211698050 211698092 -38989762 - MER103 DNA DNA -114 52 9 815 168 0 0 chr2 211698150 211698281 -38989573 - FLAM_A SINE Alu -4 138 8 208 282 56 14 chr2 211698351 211698422 -38989432 + MIR SINE MIR 57 130 -132 541 223 37 13 chr2 211698755 211699002 -38988852 + MLT1G1 LTR MaLR 1 215 -315 291 153 0 34 chr2 211698987 211699046 -38988808 + MLT1G1 LTR MaLR 322 378 -212 * 481 223 147 102 chr2 211699049 211699314 -38988540 + L2 LINE L2 3037 3313 0 213 269 0 0 chr2 211699392 211699459 -38988395 + (TA)n Simple_repeat Simple_repeat 2 68 0 305 248 9 28 chr2 211699500 211699609 -38988245 + HAL1 LINE L1 1036 1142 -1365 392 253 94 18 chr2 211699633 211699803 -38988051 + HAL1 LINE L1 1119 1301 -1206 562 259 43 81 chr2 211700084 211700309 -38987545 + HAL1 LINE L1 2151 2383 -124 8490 76 4 1 chr2 211700309 211701377 -38986477 - MER11C LTR ERVK 0 1071 1 562 259 43 81 chr2 211701377 211701440 -38986414 + HAL1 LINE L1 2383 2424 -83 2288 98 7 3 chr2 211701440 211701737 -38986117 - AluSx SINE Alu -13 299 2 562 259 43 81 chr2 211701737 211701818 -38986036 + HAL1 LINE L1 2424 2507 0 291 221 87 54 chr2 211701834 211701983 -38985871 + L1ME4a LINE L1 5964 6117 -4 306 243 68 19 chr2 211702064 211702167 -38985687 + HAL1 LINE L1 1194 1301 -1206 675 185 8 8 chr2 211702363 211702482 -38985372 + FLAM_C SINE Alu 7 125 -18 1519 157 12 92 chr2 211702493 211702830 -38985024 + AluJo SINE Alu 1 310 -2 1767 132 79 4 chr2 211702963 211703243 -38984611 - AluSx SINE Alu -11 301 1 795 167 26 83 chr2 211703882 211704074 -38983780 + MER20 DNA MER1_type 30 210 -9 1571 195 118 76 chr2 211704971 211705473 -38982381 - MER74A LTR ERVL -21 537 15 2294 92 14 0 chr2 211705476 211705768 -38982086 + AluSp SINE Alu 1 296 -17 2544 114 40 42 chr2 211706125 211706474 -38981380 + L1MB7 LINE L1 5739 6088 -96 2178 127 3 3 chr2 211706474 211706766 -38981088 - AluSx SINE Alu -20 292 1 2544 114 40 42 chr2 211706766 211706863 -38980991 + L1MB7 LINE L1 6088 6184 0 1882 146 0 18 chr2 211707632 211707912 -38979942 + AluJb SINE Alu 1 275 -37 533 243 21 48 chr2 211708270 211708459 -38979395 - MER5A DNA MER1_type 0 189 6 487 250 24 42 chr2 211708628 211708796 -38979058 - MIR SINE MIR 0 262 98 1330 162 30 49 chr2 211708998 211709264 -38978590 - MLT1C LTR MaLR 0 467 207 2786 147 28 0 chr2 211709272 211709729 -38978125 + MER31A LTR ERV1 3 472 -13 1891 153 3 3 chr2 211709730 211710025 -38977829 - AluSx SINE Alu -17 295 1 1222 120 10 26 chr2 211710043 211710235 -38977619 - MLT1C LTR MaLR -257 210 22 1073 130 12 0 chr2 211710357 211710519 -38977335 + FRAM SINE Alu 9 172 -4 216 275 42 58 chr2 211711707 211711827 -38976027 - L2 LINE L2 -246 3026 2909 311 248 132 8 chr2 211712009 211712130 -38975724 - Charlie8 DNA MER1_type -2162 255 120 282 202 22 11 chr2 211712130 211712219 -38975635 + (TA)n Simple_repeat Simple_repeat 2 91 0 1866 168 0 3 chr2 211712291 211712589 -38975265 - AluJo SINE Alu -10 302 6 342 224 0 0 chr2 211713335 211713420 -38974434 + (TG)n Simple_repeat Simple_repeat 1 85 0 1923 146 26 16 chr2 211714296 211714644 -38973210 - AluJo SINE Alu 0 351 1 2382 144 98 55 chr2 211715263 211715392 -38972462 + LTR64 LTR ERVK 1 123 -390 2134 121 3 26 chr2 211715392 211715699 -38972155 + AluSq SINE Alu 1 300 -13 2382 144 98 55 chr2 211715699 211716015 -38971839 + LTR64 LTR ERVK 123 471 -42 1835 118 0 0 chr2 211716015 211716261 -38971593 - AluSg SINE Alu -64 246 1 2382 144 98 55 chr2 211716261 211716306 -38971548 + LTR64 LTR ERVK 471 513 0 253 189 40 14 chr2 211716449 211716523 -38971331 - LTR23 LTR ERV1 0 437 362 1029 172 12 0 chr2 211716588 211716751 -38971103 - AluSg/x SINE Alu -14 298 134 2274 108 0 0 chr2 211716751 211717047 -38970807 - AluSx SINE Alu -16 296 1 1406 115 9 14 chr2 211717050 211717268 -38970586 - LTR56 LTR ERV1 -224 221 5 1684 159 45 10 chr2 211717343 211717633 -38970221 + AluJo SINE Alu 1 300 -12 1805 168 118 86 chr2 211717662 211718229 -38969625 + LTR49 LTR ERV1 1 585 -10 401 283 48 57 chr2 211718232 211718462 -38969392 + LTR49-int LTR ERV1 1 228 -6103 1100 186 122 39 chr2 211718512 211718791 -38969063 - AluJo SINE Alu 0 302 1 415 239 106 21 chr2 211718830 211718972 -38968882 + LTR49-int LTR ERV1 454 607 -4329 226 154 0 0 chr2 211718978 211719017 -38968837 - MER31A LTR ERV1 -182 303 265 920 254 5 10 chr2 211719024 211719221 -38968633 + LTR49-int LTR ERV1 1908 2103 -4228 1504 174 58 13 chr2 211719251 211719562 -38968292 + LTR49-int LTR ERV1 2948 3272 -3059 428 233 19 10 chr2 211719609 211719712 -38968142 + LTR49-int LTR ERV1 3264 3367 -2964 626 169 32 24 chr2 211719743 211719867 -38967987 + LTR49-int LTR ERV1 3348 3472 -2859 653 186 0 25 chr2 211719867 211719985 -38967869 + AluSq/x SINE Alu 15 129 -184 32 26 0 0 chr2 211719985 211720024 -38967830 + AT_rich Low_complexity Low_complexity 1 39 0 1432 163 68 61 chr2 211720033 211720159 -38967695 + AluJb SINE Alu 1 125 -187 2148 127 0 7 chr2 211720159 211720459 -38967395 - AluSx SINE Alu -14 298 1 1432 163 68 61 chr2 211720459 211720626 -38967228 + AluJb SINE Alu 125 296 -16 2168 127 0 7 chr2 211720633 211720932 -38966922 + AluSx SINE Alu 1 297 -15 2021 153 0 3 chr2 211720936 211721237 -38966617 - AluJb SINE Alu -8 304 5 528 223 15 104 chr2 211721241 211721368 -38966486 + MER83B-int LTR ERV1 2709 2846 -2034 1057 165 161 84 chr2 211721368 211721486 -38966368 + AluJo SINE Alu 1 108 -194 288 0 0 0 chr2 211721486 211721518 -38966336 + (TA)n Simple_repeat Simple_repeat 2 33 0 1057 165 161 84 chr2 211721518 211721672 -38966182 + AluJo SINE Alu 108 294 -8 528 223 15 104 chr2 211721672 211721704 -38966150 + MER83B-int LTR ERV1 2846 2879 -2001 2458 43 0 0 chr2 211721704 211722011 -38965843 + AluY SINE Alu 1 307 0 528 223 15 104 chr2 211722011 211722118 -38965736 + MER83B-int LTR ERV1 2879 2953 -1927 279 216 0 0 chr2 211722268 211722319 -38965535 - MER116 DNA Mariner -29 51 1 321 169 12 60 chr2 211722361 211722444 -38965410 + L1MB7 LINE L1 6097 6175 -9 303 233 111 0 chr2 211723166 211723232 -38964622 - MER5A DNA MER1_type -80 109 29 198 103 0 0 chr2 211723232 211723261 -38964593 + (CTG)n Simple_repeat Simple_repeat 1 29 0 303 233 111 0 chr2 211723261 211723284 -38964570 - MER5A DNA MER1_type -160 29 10 1146 203 31 46 chr2 211723302 211723627 -38964227 - MER33 DNA MER1_type 0 324 5 2351 83 3 0 chr2 211724100 211724402 -38963452 + AluSp SINE Alu 5 307 -6 4144 98 148 116 chr2 211724407 211725827 -38962027 + pTR5 LTR ERV1 732 2438 0 2300 103 71 31 chr2 211726091 211726441 -38961413 + THE1B LTR MaLR 1 364 0 450 309 147 18 chr2 211726441 211726713 -38961141 - L3 LINE CR1 -58 1519 1213 198 209 0 0 chr2 211726761 211726804 -38961050 + (TA)n Simple_repeat Simple_repeat 1 43 0 1320 238 77 30 chr2 211726820 211726936 -38960918 - L2 LINE L2 -1605 1709 1600 1745 207 22 3 chr2 211726936 211727294 -38960560 - MLT1A1 LTR MaLR 0 365 1 1320 238 77 30 chr2 211727294 211727644 -38960210 - L2 LINE L2 -1714 1600 1221 1912 164 10 3 chr2 211727679 211727984 -38959870 - AluJb SINE Alu -5 307 1 2471 85 0 3 chr2 211728088 211728393 -38959461 + AluSx SINE Alu 1 304 -8 181 362 114 0 chr2 211728394 211728499 -38959355 - MIR3 SINE MIR -27 181 65 243 320 129 0 chr2 211728508 211728655 -38959199 + L3 LINE CR1 1269 1434 -143 2242 95 0 30 chr2 211728668 211728972 -38958882 + AluSg SINE Alu 1 295 -15 204 40 0 0 chr2 211729178 211729203 -38958651 + (A)n Simple_repeat Simple_repeat 1 25 0 2530 59 0 7 chr2 211729444 211729747 -38958107 - AluY SINE Alu -10 301 1 1605 235 94 40 chr2 211730052 211730550 -38957304 - REP3 LTR ERV -35 527 3 2316 95 0 19 chr2 211731437 211731753 -38956101 + AluSx SINE Alu 1 310 -2 365 250 13 0 chr2 211731774 211731850 -38956004 - MIR3 SINE MIR -48 160 84 635 122 0 0 chr2 211732843 211732941 -38954913 - AluSg/x SINE Alu -1 308 211 2139 120 3 0 chr2 211733766 211734066 -38953788 - AluSx SINE Alu -7 305 5 372 65 32 16 chr2 211734081 211734143 -38953711 + HSMAR2 DNA Mariner 1192 1254 -48 1255 180 6 114 chr2 211734145 211734478 -38953376 - AluJb SINE Alu -4 298 2 2014 125 41 3 chr2 211734484 211734779 -38953075 - AluSx SINE Alu -6 306 1 2333 102 7 0 chr2 211734932 211735235 -38952619 - AluSg SINE Alu -5 305 1 743 232 152 9 chr2 211735526 211735750 -38952104 - MIR SINE MIR -5 257 2 1253 0 43 0 chr2 211736109 211736318 -38951536 + (TAAAA)n Simple_repeat Simple_repeat 1 218 0 514 139 13 0 chr2 211737070 211737149 -38950705 + AluS SINE Alu 5 84 -229 1286 174 141 55 chr2 211737614 211737977 -38949877 + MSTD LTR MaLR 1 394 -2 730 155 9 9 chr2 211738067 211738183 -38949671 - FLAM_C SINE Alu -26 117 2 2184 97 10 27 chr2 211738213 211738511 -38949343 + AluSx SINE Alu 1 293 -19 1780 165 10 7 chr2 211739069 211739360 -38948494 + AluJb SINE Alu 1 292 -20 713 142 0 0 chr2 211739400 211739506 -38948348 + AluJb SINE Alu 192 297 -15 297 122 0 0 chr2 211739639 211739680 -38948174 - MSTA LTR MaLR 0 428 388 1819 148 0 7 chr2 211739680 211739957 -38947897 + AluJo SINE Alu 1 275 -37 1212 135 94 90 chr2 211739961 211740228 -38947626 - MSTA LTR MaLR -160 268 1 762 92 9 18 chr2 211740249 211740358 -38947496 + AluJo SINE Alu 29 136 -176 1790 164 0 33 chr2 211740360 211740665 -38947189 + AluJb SINE Alu 1 295 -17 258 105 0 0 chr2 211742236 211742274 -38945580 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 238 200 0 18 chr2 211742874 211742929 -38944925 + (CATATA)n Simple_repeat Simple_repeat 4 57 0 180 253 0 0 chr2 211743966 211744041 -38943813 + (TA)n Simple_repeat Simple_repeat 1 75 0 198 0 0 0 chr2 211745811 211745833 -38942021 + (A)n Simple_repeat Simple_repeat 1 22 0 205 70 70 0 chr2 211746541 211746584 -38941270 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 26 30 0 0 chr2 211748076 211748109 -38939745 + AT_rich Low_complexity Low_complexity 1 33 0 27 0 0 0 chr2 211748535 211748562 -38939292 + AT_rich Low_complexity Low_complexity 1 27 0 2264 110 0 0 chr2 211753761 211754060 -38933794 + AluSx SINE Alu 1 299 -13 2093 125 3 0 chr2 211754125 211754421 -38933433 + AluSx SINE Alu 1 297 -15 2103 148 0 0 chr2 211754900 211755210 -38932644 + AluSx SINE Alu 1 310 -2 2175 110 0 7 chr2 211755349 211755639 -38932215 - AluSq SINE Alu -20 293 6 2400 84 0 0 chr2 211755643 211755939 -38931915 - AluSg SINE Alu -14 296 1 2081 103 11 0 chr2 211756399 211756680 -38931174 + AluSx SINE Alu 12 295 -17 875 240 131 29 chr2 211757306 211757423 -38930431 + HsTC2 DNA Tc2 5 109 -1789 285 29 0 0 chr2 211757423 211757457 -38930397 + (CA)n Simple_repeat Simple_repeat 2 35 0 875 240 131 29 chr2 211757457 211757927 -38929927 + HsTC2 DNA Tc2 109 1885 -13 2287 107 3 0 chr2 211758157 211758457 -38929397 + AluSq SINE Alu 1 301 -12 711 286 168 7 chr2 211759082 211759379 -38928475 - L2 LINE L2 0 3313 2969 417 167 0 0 chr2 211759379 211759439 -38928415 + AluJ/FLAM SINE Alu 2 61 -251 228 284 0 27 chr2 211759441 211759515 -38928339 - L2 LINE L2 -555 2759 2688 767 221 129 18 chr2 211759515 211759732 -38928122 + L1ME1 LINE L1 5892 6132 -34 680 238 26 57 chr2 211759769 211759944 -38927910 - L2 LINE L2 -622 2692 2522 1959 148 3 10 chr2 211759944 211760248 -38927606 + AluSx SINE Alu 1 302 -10 680 238 26 57 chr2 211760248 211760265 -38927589 - L2 LINE L2 -792 2522 2506 30 89 0 0 chr2 211760417 211760496 -38927358 + AT_rich Low_complexity Low_complexity 1 79 0 2419 84 3 0 chr2 211760632 211760928 -38926926 + AluY SINE Alu 1 297 -14 21 0 0 0 chr2 211761207 211761228 -38926626 + AT_rich Low_complexity Low_complexity 1 21 0 2118 118 7 3 chr2 211761238 211761535 -38926319 + AluSx SINE Alu 2 299 -13 2372 123 22 25 chr2 211761696 211762061 -38925793 + THE1B LTR MaLR 1 364 0 12357 90 2 30 chr2 211762061 211762965 -38924889 + THE1B-int LTR MaLR 1 840 -740 2155 119 0 7 chr2 211762965 211763260 -38924594 + AluSx SINE Alu 3 295 -17 12357 90 2 30 chr2 211763260 211763981 -38923873 + THE1B-int LTR MaLR 840 1580 0 2276 128 21 53 chr2 211763981 211764357 -38923497 + THE1B LTR MaLR 1 364 0 234 263 101 30 chr2 211764376 211764475 -38923379 - MIR SINE MIR -80 128 23 261 219 101 67 chr2 211764908 211765027 -38922827 - MER112 DNA MER1_type -137 123 1 2134 119 10 16 chr2 211765496 211765806 -38922048 - AluSq SINE Alu -5 308 1 1505 174 72 7 chr2 211765999 211766275 -38921579 + AluJb SINE Alu 1 294 -18 856 242 23 45 chr2 211767496 211767760 -38920094 + MIR SINE MIR 1 258 -4 21 0 0 0 chr2 211767957 211767978 -38919876 + AT_rich Low_complexity Low_complexity 1 21 0 841 87 0 127 chr2 211768235 211768385 -38919469 + FLAM_C SINE Alu 1 131 -2 2172 114 7 3 chr2 211768975 211769274 -38918580 - AluSq SINE Alu -13 300 1 2314 92 3 10 chr2 211769445 211769750 -38918104 + AluSg SINE Alu 1 303 -7 1055 146 0 0 chr2 211770080 211770238 -38917616 - AluY SINE Alu -18 293 136 2155 117 0 7 chr2 211770277 211770576 -38917278 + AluSq SINE Alu 1 297 -16 2131 126 3 3 chr2 211770762 211771063 -38916791 + AluSg SINE Alu 1 301 -9 322 332 27 80 chr2 211771605 211771792 -38916062 - L2 LINE L2 -94 3178 3002 2350 100 0 7 chr2 211772106 211772416 -38915438 - AluSg SINE Alu -2 308 1 2305 104 0 0 chr2 211772606 211772903 -38914951 + AluSq SINE Alu 1 297 -16 243 0 0 0 chr2 211772903 211772930 -38914924 + (TA)n Simple_repeat Simple_repeat 2 28 0 742 58 10 39 chr2 211772953 211773056 -38914798 + HY3 scRNA scRNA 1 100 -1 544 194 0 0 chr2 211773126 211773219 -38914635 + AluJb SINE Alu 207 299 -13 1820 174 0 3 chr2 211773265 211773559 -38914295 - AluSx SINE Alu -19 293 1 2201 114 3 7 chr2 211773625 211773931 -38913923 + AluSx SINE Alu 1 305 -7 23 0 0 0 chr2 211773936 211773959 -38913895 + AT_rich Low_complexity Low_complexity 1 23 0 263 156 65 0 chr2 211773970 211774047 -38913807 + (TA)n Simple_repeat Simple_repeat 1 82 0 354 231 0 11 chr2 211774219 211774310 -38913544 + L1ME4a LINE L1 5793 5882 -239 216 158 0 0 chr2 211774496 211774534 -38913320 + (CA)n Simple_repeat Simple_repeat 2 39 0 377 216 105 59 chr2 211774534 211774687 -38913167 + L1ME4a LINE L1 5960 6119 -2 1879 147 10 26 chr2 211774777 211775084 -38912770 + AluJo SINE Alu 1 302 -10 2437 90 0 3 chr2 211776236 211776548 -38911306 - AluY SINE Alu 0 311 1 310 269 69 35 chr2 211776602 211776747 -38911107 + MER117 DNA MER1_type 1 150 -47 249 323 24 17 chr2 211777262 211777393 -38910461 + MER5A DNA MER1_type 1 141 -48 1672 175 39 7 chr2 211777550 211777835 -38910019 + AluSx SINE Alu 1 294 -18 216 254 0 0 chr2 211777842 211777901 -38909953 - L2 LINE L2 -214 3058 3000 1329 116 0 11 chr2 211778447 211778636 -38909218 + AluSg/x SINE Alu 118 304 -8 2921 247 67 5 chr2 211779031 211779858 -38907996 + L1PB1 LINE L1 6 883 -5980 12828 161 82 10 chr2 211779862 211784082 -38903772 + L1PB1 LINE L1 2318 6867 0 529 241 9 0 chr2 211784171 211784283 -38903571 - MER5C DNA MER1_type -201 123 11 185 309 24 24 chr2 211784472 211784556 -38903298 + MIR SINE MIR 124 207 -55 3424 173 9 21 chr2 211784920 211785597 -38902257 + L1PB4 LINE L1 5433 6151 -5 1668 138 123 7 chr2 211785910 211786179 -38901675 + AluJb SINE Alu 1 300 -2 2199 101 3 16 chr2 211786476 211786784 -38901070 + AluSp SINE Alu 1 304 -9 22 70 0 0 chr2 211786848 211786891 -38900963 + AT_rich Low_complexity Low_complexity 1 43 0 2301 104 7 0 chr2 211786891 211787200 -38900654 + AluSx SINE Alu 2 312 0 541 198 129 73 chr2 211787202 211787373 -38900481 + L1M4 LINE L1 3332 3521 -2625 2125 127 24 0 chr2 211787373 211787665 -38900189 + AluSx SINE Alu 3 301 -11 541 198 129 73 chr2 211787665 211787725 -38900129 + L1M4 LINE L1 3521 3576 -2570 397 202 0 11 chr2 211788238 211788332 -38899522 + L1MEc LINE L1 2229 2321 -4075 * 1770 230 85 16 chr2 211788329 211789226 -38898628 + L1MEc LINE L1 1952 3029 -3186 1517 153 88 29 chr2 211789226 211789500 -38898354 + AluJb SINE Alu 1 290 -22 1770 230 85 16 chr2 211789500 211789759 -38898095 + L1MEc LINE L1 3029 3269 -2946 2259 88 3 0 chr2 211789770 211790055 -38897799 + AluSx SINE Alu 11 296 -16 1599 183 45 0 chr2 211790063 211790352 -38897502 + AluJo SINE Alu 1 302 -10 2205 110 0 0 chr2 211790524 211790830 -38897024 - AluSg SINE Alu 0 306 1 2440 76 3 0 chr2 211790842 211791146 -38896708 - AluY SINE Alu -6 305 1 1718 179 7 7 chr2 211791270 211791555 -38896299 + AluJo SINE Alu 1 285 -27 198 0 0 0 chr2 211791556 211791578 -38896276 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 206 176 20 0 chr2 211791730 211791781 -38896073 + (TGAA)n Simple_repeat Simple_repeat 1 52 0 220 239 0 0 chr2 211791842 211791888 -38895966 + A-rich Low_complexity Low_complexity 1 46 0 468 264 9 0 chr2 211793236 211793346 -38894508 + MIR3 SINE MIR 88 198 -10 1148 109 0 19 chr2 211793615 211793771 -38894083 + AluSq SINE Alu 1 153 -160 574 128 0 0 chr2 211793771 211793857 -38893997 + AluS SINE Alu 226 311 -1 2158 95 17 0 chr2 211794143 211794437 -38893417 - AluSg SINE Alu -11 299 1 2257 113 0 7 chr2 211794577 211794879 -38892975 - AluSx SINE Alu -12 300 1 2506 44 0 17 chr2 211795217 211795515 -38892339 - AluY SINE Alu -18 293 1 1837 152 4 0 chr2 211795617 211795893 -38891961 - AluJb SINE Alu -35 277 1 1582 183 3 33 chr2 211795972 211796278 -38891576 + AluJo SINE Alu 1 297 -15 2303 100 0 3 chr2 211797212 211797511 -38890343 + AluSx SINE Alu 3 300 -12 2403 97 0 3 chr2 211797572 211797882 -38889972 + AluSg SINE Alu 2 310 0 22 35 0 0 chr2 211797957 211797986 -38889868 + AT_rich Low_complexity Low_complexity 1 29 0 2412 57 0 3 chr2 211798048 211798346 -38889508 + AluY SINE Alu 2 298 -13 231 36 0 0 chr2 211798576 211798604 -38889250 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 721 191 105 13 chr2 211798587 211798739 -38889115 - AluJo SINE Alu 0 302 137 1693 201 63 92 chr2 211798930 211799022 -38888832 + Charlie1a DNA MER1_type 2 95 -2666 823 144 0 43 chr2 211799022 211799161 -38888693 - AluJo SINE Alu -169 133 1 1693 201 63 92 chr2 211799161 211799553 -38888301 + Charlie1a DNA MER1_type 95 473 -2288 2309 80 0 23 chr2 211799553 211799853 -38888001 - AluSg SINE Alu -17 293 1 1693 201 63 92 chr2 211799853 211799888 -38887966 + Charlie1a DNA MER1_type 473 507 -948 1636 148 86 22 chr2 211799888 211800166 -38887688 + AluJo SINE Alu 1 296 -16 500 169 92 0 chr2 211800168 211800298 -38887556 + Charlie1a DNA MER1_type 1313 1454 -1 349 258 91 88 chr2 211800298 211800639 -38887215 + L1ME LINE L1 5406 5747 -374 29 60 0 0 chr2 211800821 211800871 -38886983 + AT_rich Low_complexity Low_complexity 1 50 0 2405 98 0 0 chr2 211801203 211801500 -38886354 - AluSq SINE Alu -16 297 1 894 138 0 43 chr2 211801544 211801682 -38886172 - FLAM_C SINE Alu -1 132 1 448 244 189 39 chr2 211801683 211801876 -38885978 - L1MC/D LINE L1 -311 5810 5647 2154 131 0 0 chr2 211801876 211802174 -38885680 - AluSx SINE Alu -14 298 1 795 200 0 0 chr2 211802176 211802306 -38885548 - AluJo/FLAM SINE Alu -172 130 1 448 244 189 39 chr2 211802306 211802499 -38885355 - L1MC/D LINE L1 -474 5647 5356 278 316 58 5 chr2 211802555 211802761 -38885093 + L1M4 LINE L1 4949 5165 -981 2041 167 18 0 chr2 211803052 211803388 -38884466 - MER2 DNA MER2_type -2 342 1 189 74 0 0 chr2 211804782 211804809 -38883045 + (GA)n Simple_repeat Simple_repeat 2 28 0 257 290 70 38 chr2 211804880 211805051 -38882803 - MIR SINE MIR -57 151 34 656 143 19 0 chr2 211805072 211805177 -38882677 + L1PB1 LINE L1 6042 6148 -3 269 213 33 0 chr2 211805199 211805260 -38882594 - L1M4 LINE L1 -2585 3561 3499 1248 103 11 0 chr2 211805289 211805474 -38882380 - L1M1 LINE L1 -5360 2205 2019 2405 82 3 0 chr2 211805499 211805803 -38882051 + AluY SINE Alu 1 305 -6 2222 116 7 0 chr2 211805813 211806116 -38881738 + AluSx SINE Alu 1 305 -7 495 164 34 119 chr2 211806122 211806299 -38881555 + MER103 DNA DNA 4 165 -1 910 132 0 22 chr2 211806303 211806439 -38881415 + FLAM_C SINE Alu 1 133 0 2304 117 0 0 chr2 211806459 211806766 -38881088 + AluSx SINE Alu 1 307 -5 195 69 0 0 chr2 211807101 211807130 -38880724 + (TG)n Simple_repeat Simple_repeat 1 29 0 1698 200 3 7 chr2 211807282 211807592 -38880262 + AluJo SINE Alu 1 309 -3 2144 102 10 10 chr2 211807611 211807904 -38879950 + AluSx SINE Alu 1 293 -19 2530 58 3 0 chr2 211807924 211808218 -38879636 - AluSp SINE Alu -17 296 2 9358 132 45 34 chr2 211808476 211808807 -38879047 + L1MA4A LINE L1 3617 3943 -2360 2144 121 52 25 chr2 211808807 211809172 -38878682 + THE1C LTR MaLR 1 375 0 9358 132 45 34 chr2 211809172 211810609 -38877245 + L1MA4A LINE L1 3943 5426 -877 2700 61 0 0 chr2 211810609 211810920 -38876934 + AluY SINE Alu 1 311 0 9358 132 45 34 chr2 211810920 211811807 -38876047 + L1MA4A LINE L1 5426 6302 -1 247 214 51 71 chr2 211811941 211812039 -38875815 + MIR3 SINE MIR 110 205 -3 2180 113 3 7 chr2 211812457 211812759 -38875095 + AluSp SINE Alu 1 301 -12 2967 119 31 5 chr2 211812763 211813210 -38874644 + L1PA15 LINE L1 5707 6165 0 225 0 0 0 chr2 211813512 211813537 -38874317 + (TGG)n Simple_repeat Simple_repeat 2 26 0 366 23 0 0 chr2 211813652 211813695 -38874159 + (CA)n Simple_repeat Simple_repeat 2 44 0 2310 96 0 13 chr2 211813819 211814121 -38873733 + AluSq SINE Alu 3 300 -13 419 298 118 32 chr2 211814822 211815137 -38872717 + MLT1I LTR MaLR 68 409 0 494 252 113 35 chr2 211818018 211818248 -38869606 - MIR SINE MIR 0 262 15 615 251 161 80 chr2 211818966 211819377 -38868477 - MLT1K LTR MaLR -1 587 144 377 254 46 69 chr2 211819778 211819951 -38867903 - MIR SINE MIR -70 192 24 215 232 89 0 chr2 211820958 211821014 -38866840 - MIR SINE MIR -46 216 156 444 234 9 27 chr2 211822081 211822192 -38865662 + MIR3 SINE MIR 90 198 -10 534 260 53 35 chr2 211822543 211822712 -38865142 - MER5B DNA MER1_type -6 172 1 2389 153 89 0 chr2 211822992 211823385 -38864469 - MSTC LTR MaLR 0 428 1 262 286 45 38 chr2 211823392 211823525 -38864329 - MIR SINE MIR -110 152 19 1001 245 12 8 chr2 211823782 211824039 -38863815 + MIR SINE MIR 2 259 -3 1225 172 64 37 chr2 211824410 211824808 -38863046 - MLT1D LTR MaLR -1 504 1 254 277 85 0 chr2 211825080 211825174 -38862680 - MIR SINE MIR -14 248 147 600 261 67 42 chr2 211829156 211829394 -38858460 - MIR SINE MIR -1 261 18 2108 187 0 13 chr2 211829544 211829939 -38857915 + MLT1B LTR MaLR 1 390 0 327 258 90 0 chr2 211829994 211830083 -38857771 - MIR3 SINE MIR -23 185 89 204 302 19 0 chr2 211830166 211830219 -38857635 - MIR SINE MIR -68 140 87 2089 113 0 7 chr2 211830513 211830825 -38857029 + AluSc SINE Alu 1 310 0 316 278 22 0 chr2 211831373 211831463 -38856391 - MIR3 SINE MIR -8 200 109 284 186 17 17 chr2 211831949 211832008 -38855846 + MER103 DNA DNA 3 61 -105 302 207 18 27 chr2 211832044 211832155 -38855699 + CT-rich Low_complexity Low_complexity 2 111 0 280 320 55 8 chr2 211832726 211832854 -38855000 - L2 LINE L2 0 3272 3139 742 212 81 55 chr2 211832866 211832921 -38854933 - MIR SINE MIR -1 261 209 2103 98 16 51 chr2 211832921 211833236 -38854618 - AluSg SINE Alu -6 304 1 742 212 81 55 chr2 211833236 211833416 -38854438 - MIR SINE MIR -53 209 20 288 53 0 0 chr2 211835022 211835060 -38852794 + (TG)n Simple_repeat Simple_repeat 2 39 0 339 164 60 0 chr2 211835581 211835648 -38852206 - MER5A DNA MER1_type -91 98 28 983 126 0 0 chr2 211835885 211836012 -38851842 + AluSq/x SINE Alu 1 127 -186 2301 105 7 0 chr2 211836017 211836322 -38851532 + AluSp SINE Alu 1 307 -6 285 244 13 26 chr2 211836322 211836400 -38851454 + MER5A DNA MER1_type 44 120 -69 815 205 43 134 chr2 211837490 211837841 -38850013 - MLT2C1 LTR ERVL -78 319 1 540 165 64 0 chr2 211837841 211837950 -38849904 - ERVL-C1 LTR ERVL -19 5745 5630 646 286 21 5 chr2 211838212 211838404 -38849450 - MIR SINE MIR -20 242 48 493 286 12 18 chr2 211838465 211838633 -38849221 + MER5A DNA MER1_type 2 168 -21 27 0 0 0 chr2 211839423 211839450 -38848404 + AT_rich Low_complexity Low_complexity 1 27 0 466 290 40 17 chr2 211840006 211840182 -38847672 - MIR SINE MIR -35 227 48 297 0 0 0 chr2 211840446 211840479 -38847375 + (TG)n Simple_repeat Simple_repeat 1 33 0 855 223 47 132 chr2 211840655 211841081 -38846773 - MLT1B LTR MaLR 0 390 1 213 39 0 0 chr2 211841931 211841957 -38845897 + (T)n Simple_repeat Simple_repeat 1 26 0 236 197 84 42 chr2 211842674 211842745 -38845109 + MER91C DNA MER1_type 23 96 -44 2182 218 94 19 chr2 211842963 211843545 -38844309 - MLT1E2 LTR MaLR 0 626 1 199 227 0 0 chr2 211843661 211843705 -38844149 - MIR SINE MIR -59 203 160 21 0 0 0 chr2 211843768 211843789 -38844065 + AT_rich Low_complexity Low_complexity 1 21 0 343 254 87 0 chr2 211843861 211843987 -38843867 + MIR SINE MIR 123 259 -3 459 243 52 71 chr2 211844002 211844260 -38843594 - MLT1J LTR MaLR -179 436 110 1837 242 15 15 chr2 211844542 211845009 -38842845 + MLT1C LTR MaLR 1 467 0 3413 130 25 4 chr2 211845125 211845641 -38842213 - MER1A DNA MER1_type 0 527 1 378 342 9 0 chr2 211846006 211846163 -38841691 + MIR3 SINE MIR 1 160 -48 273 279 63 27 chr2 211846265 211846376 -38841478 - MER112 DNA MER1_type -142 118 4 2021 148 6 46 chr2 211846454 211846805 -38841049 + MER1B DNA MER1_type 1 337 0 788 232 142 22 chr2 211847231 211847554 -38840300 + MER113 DNA MER1_type? 113 474 -47 382 277 194 19 chr2 211849302 211849508 -38838346 + MIR SINE MIR 14 255 -7 279 291 50 137 chr2 211849819 211850177 -38837677 + L2 LINE L2 2919 3245 -27 229 276 0 11 chr2 211850274 211850361 -38837493 + (TA)n Simple_repeat Simple_repeat 1 86 0 1754 159 11 0 chr2 211850365 211850636 -38837218 - AluJo SINE Alu -30 282 9 208 184 20 41 chr2 211850932 211850981 -38836873 + L2 LINE L2 3248 3295 -18 801 126 0 0 chr2 211851041 211851152 -38836702 - AluSp/q SINE Alu -13 300 190 1870 117 0 0 chr2 211851153 211851400 -38836454 - AluSx SINE Alu -65 247 1 184 167 0 111 chr2 211852068 211852122 -38835732 - L2 LINE L2 -1 3312 3265 297 325 56 12 chr2 211852282 211852442 -38835412 - LTR67 LTR ERVL -19 538 372 1908 132 35 3 chr2 211852512 211852799 -38835055 + AluJb SINE Alu 1 296 -16 1676 163 33 30 chr2 211852799 211853060 -38834794 - L1MA6 LINE L1 -237 6063 5799 2688 88 8 8 chr2 211853060 211853411 -38834443 + THE1A LTR MaLR 3 353 -2 1676 163 33 30 chr2 211853411 211853481 -38834373 - L1MA6 LINE L1 -501 5799 5731 569 212 17 28 chr2 211853477 211853675 -38834179 + L1MB8 LINE L1 5933 6131 -52 * 1721 98 0 0 chr2 211854220 211854435 -38833419 + AluSg/x SINE Alu 84 298 -14 384 71 0 0 chr2 211854553 211854609 -38833245 + (TG)n Simple_repeat Simple_repeat 2 57 0 899 227 0 11 chr2 211854656 211854841 -38833013 + MER63A DNA MER1_type 4 186 -24 4804 176 35 15 chr2 211854855 211855338 -38832516 - MER6 DNA MER2_type 0 865 356 2065 147 0 0 chr2 211855338 211855650 -38832204 - AluSx SINE Alu 0 312 1 4804 176 35 15 chr2 211855650 211856014 -38831840 - MER6 DNA MER2_type -509 356 1 232 376 87 7 chr2 211856025 211856174 -38831680 - MIR SINE MIR -73 189 29 361 206 62 21 chr2 211856274 211856371 -38831483 - MER58A DNA MER1_type 0 133 33 1160 292 59 5 chr2 211856998 211857405 -38830449 + LTR16A LTR ERVL 21 449 -1 1325 101 120 24 chr2 211857526 211857734 -38830120 - MER30 DNA MER1_type 0 230 3 210 71 0 0 chr2 211860990 211861018 -38826836 + (CA)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr2 211861017 211861038 -38826816 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 948 271 147 3 chr2 211862512 211862852 -38825002 + MLT1J LTR MaLR 86 474 -37 2095 126 3 16 chr2 211863196 211863505 -38824349 - AluSx SINE Alu -7 305 1 25 31 0 0 chr2 211865453 211865485 -38822369 + AT_rich Low_complexity Low_complexity 1 32 0 1938 129 39 0 chr2 211865485 211865764 -38822090 + AluSx SINE Alu 1 290 -22 365 310 18 9 chr2 211866855 211866968 -38820886 + L2 LINE L2 3151 3264 -8 246 257 7 167 chr2 211867182 211867326 -38820528 + L2 LINE L2 3177 3297 -16 459 35 0 0 chr2 211870046 211870103 -38817751 + (TG)n Simple_repeat Simple_repeat 2 58 0 789 281 34 21 chr2 211870308 211870543 -38817311 - MIR SINE MIR -21 241 4 250 310 90 45 chr2 211870883 211871038 -38816816 + MER5A DNA MER1_type 6 167 -22 * 404 263 76 53 chr2 211870901 211871072 -38816782 - MER5A DNA MER1_type -14 175 1 18354 185 18 31 chr2 211871360 211872427 -38815427 + L1PA10 LINE L1 3 1081 -5380 200 59 29 0 chr2 211872427 211872461 -38815393 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 18354 185 18 31 chr2 211872461 211873374 -38814480 + L1PA10 LINE L1 1081 2004 -4457 2377 116 54 25 chr2 211873374 211873728 -38814126 + THE1B LTR MaLR 1 364 0 18354 185 18 31 chr2 211873728 211876143 -38811711 + L1PA10 LINE L1 2004 4560 -1901 6726 97 15 1 chr2 211876174 211877415 -38810439 + L1PA10 LINE L1 5214 6467 -16 277 269 28 28 chr2 211877519 211877627 -38810227 + L2 LINE L2 2290 2397 -917 3472 152 10 0 chr2 211878001 211878521 -38809333 + LTR45 LTR ERV1 1 525 0 5132 244 25 16 chr2 211878782 211880197 -38807657 - L1P LINE L1 -2981 3165 1738 4202 165 39 1 chr2 211880199 211880889 -38806965 + L1PA16 LINE L1 5449 6164 -2 254 239 0 104 chr2 211882781 211882895 -38804959 + MIR SINE MIR 92 189 -55 22 0 0 0 chr2 211882975 211882997 -38804857 + AT_rich Low_complexity Low_complexity 1 22 0 342 269 21 0 chr2 211883191 211883284 -38804570 + Charlie8 DNA MER1_type 50 144 -2273 276 270 40 27 chr2 211883712 211883786 -38804068 + MIR3 SINE MIR 95 169 -39 245 295 0 0 chr2 211883891 211883952 -38803902 + MIR SINE MIR 84 144 -64 347 288 136 8 chr2 211885377 211885495 -38802359 + L2 LINE L2 3137 3269 -3 425 271 121 24 chr2 211885683 211885849 -38802005 + MIR SINE MIR 11 192 -70 354 283 21 35 chr2 211886355 211886500 -38801354 + MIR SINE MIR 120 262 0 1526 281 39 36 chr2 211887240 211887760 -38800094 + MLT1K LTR MaLR 8 528 -60 216 0 0 0 chr2 211888614 211888638 -38799216 + (ATTG)n Simple_repeat Simple_repeat 4 27 0 1668 191 0 11 chr2 211888638 211888921 -38798933 - AluJb SINE Alu -32 280 1 442 222 39 4 chr2 211889177 211889298 -38798556 - L1ME1 LINE L1 0 6334 6054 227 238 175 0 chr2 211889890 211889970 -38797884 - L2 LINE L2 -15 3298 3205 217 180 20 0 chr2 211891282 211891332 -38796522 + (TA)n Simple_repeat Simple_repeat 1 51 0 1154 161 105 56 chr2 211893180 211893217 -38794637 - MER33 DNA MER1_type -2265 320 286 2207 95 3 0 chr2 211893217 211893531 -38794323 - AluSq SINE Alu 0 315 1 1154 161 105 56 chr2 211893531 211893797 -38794057 - MER33 DNA MER1_type -2299 286 1 561 246 8 0 chr2 211894287 211894417 -38793437 + MIR SINE MIR 126 256 -6 216 0 0 0 chr2 211894525 211894549 -38793305 + (CA)n Simple_repeat Simple_repeat 1 24 0 1451 160 38 4 chr2 211896172 211896435 -38791419 - L1MA3 LINE L1 0 6305 6034 236 36 43 0 chr2 211896436 211896472 -38791382 + L1M1 LINE L1 5795 5834 -466 471 118 0 0 chr2 211896472 211896557 -38791297 + (TA)n Simple_repeat Simple_repeat 2 86 0 202 206 0 0 chr2 211896557 211896591 -38791263 + (CA)n Simple_repeat Simple_repeat 1 34 0 324 88 75 0 chr2 211896613 211896693 -38791161 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 1033 95 0 0 chr2 211896704 211896841 -38791013 - L1MA3 LINE L1 -524 5781 5645 195 273 101 71 chr2 211898947 211899046 -38788808 - L2 LINE L2 -2 3270 3169 6048 181 47 8 chr2 211900605 211902707 -38785147 + L1MC1 LINE L1 4127 6315 -18 207 148 33 16 chr2 211902714 211902775 -38785079 + (TA)n Simple_repeat Simple_repeat 1 62 0 279 79 0 0 chr2 211902804 211902842 -38785012 + (TG)n Simple_repeat Simple_repeat 2 39 0 213 121 0 0 chr2 211903038 211903071 -38784783 + (T)n Simple_repeat Simple_repeat 1 33 0 273 383 39 62 chr2 211904504 211904698 -38783156 + L2 LINE L2 2366 2563 -751 2660 88 16 11 chr2 211904698 211905071 -38782783 + THE1C LTR MaLR 1 375 0 273 383 39 62 chr2 211905071 211905181 -38782673 + L2 LINE L2 2563 2674 -640 1933 124 7 7 chr2 211905181 211905464 -38782390 - AluSq SINE Alu -30 283 1 273 383 39 62 chr2 211905464 211905623 -38782231 + L2 LINE L2 2674 2819 -495 192 173 39 39 chr2 211905779 211905831 -38782023 + L2 LINE L2 3221 3272 0 696 253 149 20 chr2 211908758 211909007 -38778847 + L1ME LINE L1 5372 5652 -469 905 274 62 6 chr2 211909860 211910181 -38777673 + LTR16C LTR ERVL 137 475 -16 2598 54 0 25 chr2 211910305 211910622 -38777232 + AluY SINE Alu 1 309 -2 382 244 35 0 chr2 211910773 211910888 -38776966 - L1MC4 LINE L1 -146 7896 7778 824 305 133 28 chr2 211911298 211912198 -38775656 + L2 LINE L2 2305 3313 0 548 297 41 24 chr2 211913746 211913977 -38773877 + MIR SINE MIR 21 252 -10 186 308 279 6 chr2 211914475 211914647 -38773207 + MIR SINE MIR 28 246 -16 232 267 69 30 chr2 211917632 211917733 -38770121 - L2 LINE L2 -67 3246 3142 922 214 26 30 chr2 211917771 211918005 -38769849 + MIR SINE MIR 14 246 -16 2522 83 0 0 chr2 211918028 211918330 -38769524 + AluSx SINE Alu 1 302 -10 1565 193 7 4 chr2 211918481 211918755 -38769099 + AluJb SINE Alu 1 275 -37 233 376 18 18 chr2 211918881 211918990 -38768864 - L2 LINE L2 -19 3294 3186 201 293 112 9 chr2 211920045 211920161 -38767693 - L2 LINE L2 -1676 1638 1511 532 328 30 0 chr2 211920215 211920416 -38767438 - MIR SINE MIR -37 225 19 195 42 0 0 chr2 211922648 211922672 -38765182 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 1663 162 6 68 chr2 211922957 211923308 -38764546 + MER2 DNA MER2_type 17 345 0 24 53 0 0 chr2 211923398 211923436 -38764418 + AT_rich Low_complexity Low_complexity 1 38 0 213 39 0 0 chr2 211924880 211924906 -38762948 + (TTC)n Simple_repeat Simple_repeat 2 27 0 1133 177 77 0 chr2 211924923 211925183 -38762671 - L1MC3 LINE L1 -21 7764 7485 1947 128 0 17 chr2 211925213 211925532 -38762322 + AluSx SINE Alu 1 314 0 243 0 0 0 chr2 211926923 211926950 -38760904 + (TG)n Simple_repeat Simple_repeat 2 28 0 314 240 0 73 chr2 211926964 211927060 -38760794 - L1MC4 LINE L1 -1339 6703 6615 311 247 56 0 chr2 211927076 211927165 -38760689 + L1MC4 LINE L1 6612 6705 -1337 5315 174 27 29 chr2 211927963 211929274 -38758580 - L1MC1 LINE L1 0 6333 5023 677 325 99 50 chr2 211929395 211929959 -38757895 - L2 LINE L2 -787 2527 1936 199 291 13 13 chr2 211930570 211930649 -38757205 - L2 LINE L2 -1390 1924 1846 334 254 44 0 chr2 211931018 211931132 -38756722 - L1ME4a LINE L1 -255 5866 5748 263 287 28 37 chr2 211932973 211933081 -38754773 + MIR3 SINE MIR 91 197 -11 213 175 0 0 chr2 211933455 211933495 -38754359 + (TG)n Simple_repeat Simple_repeat 1 40 0 424 236 73 27 chr2 211934225 211934335 -38753519 - MIR SINE MIR -117 145 31 236 379 35 9 chr2 211934737 211934853 -38753001 + L2 LINE L2 3153 3271 -1 369 93 0 0 chr2 211935524 211935578 -38752276 + (CA)n Simple_repeat Simple_repeat 1 54 0 2362 112 3 0 chr2 211935753 211936065 -38751789 - AluSq SINE Alu 0 313 1 232 238 79 69 chr2 211936091 211936192 -38751662 + L2 LINE L2 3171 3272 0 2325 112 3 0 chr2 211936279 211936583 -38751271 + AluSq SINE Alu 1 305 -8 727 246 65 19 chr2 211938869 211939084 -38748770 + MIR SINE MIR 38 262 0 270 191 15 15 chr2 211939268 211939336 -38748518 + GA-rich Low_complexity Low_complexity 1 68 0 189 0 0 0 chr2 211939433 211939454 -38748400 + (TG)n Simple_repeat Simple_repeat 2 22 0 190 245 75 0 chr2 211940787 211940840 -38747014 - MIR SINE MIR -50 212 156 2102 123 0 26 chr2 211943158 211943460 -38744394 + AluSx SINE Alu 1 294 -18 389 286 175 25 chr2 211943528 211943808 -38744046 + L2 LINE L2 2991 3312 -1 211 313 0 0 chr2 211943843 211943907 -38743947 + T-rich Low_complexity Low_complexity 1 64 0 1041 168 12 0 chr2 211944031 211944204 -38743650 + AluJb SINE Alu 133 307 -5 22 56 0 0 chr2 211944353 211944389 -38743465 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 211944713 211944734 -38743120 + AT_rich Low_complexity Low_complexity 1 21 0 2303 106 0 0 chr2 211949137 211949430 -38738424 + AluSc SINE Alu 1 293 -16 272 277 18 18 chr2 211953792 211953904 -38733950 + HAL1b LINE L1 346 457 -891 283 206 0 27 chr2 211954120 211954193 -38733661 + HAL1b LINE L1 638 708 -640 23 0 0 0 chr2 211954223 211954246 -38733608 + AT_rich Low_complexity Low_complexity 1 23 0 1573 98 0 0 chr2 211954465 211954669 -38733185 + AluSg/x SINE Alu 81 284 -25 267 173 0 0 chr2 211954669 211954721 -38733133 + (TA)n Simple_repeat Simple_repeat 1 52 0 309 293 29 50 chr2 211955239 211955379 -38732475 + L2 LINE L2 3177 3313 0 28 29 0 0 chr2 211955394 211955429 -38732425 + AT_rich Low_complexity Low_complexity 1 35 0 193 118 39 39 chr2 211955759 211955810 -38732044 + A-rich Low_complexity Low_complexity 4 54 0 22 0 0 0 chr2 211955810 211955832 -38732022 + AT_rich Low_complexity Low_complexity 1 22 0 303 381 32 23 chr2 211955845 211956155 -38731699 + L1ME4a LINE L1 3364 3676 -2470 183 42 0 0 chr2 211956159 211956183 -38731671 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 299 266 40 54 chr2 211956209 211956431 -38731423 + L1ME4a LINE L1 3723 3941 -2205 484 290 67 21 chr2 211956993 211957321 -38730533 + L1ME4a LINE L1 5709 6051 -70 8683 167 34 9 chr2 211957383 211960622 -38727232 + L1PA14 LINE L1 1622 7595 0 8683 166 60 6 chr2 211960622 211963091 -38724763 + L1PA14 LINE L1 5049 7599 0 22 70 0 0 chr2 211963103 211963146 -38724708 + AT_rich Low_complexity Low_complexity 1 43 0 225 304 123 0 chr2 211963620 211963758 -38724096 + MER112 DNA MER1_type 88 242 -18 190 374 12 0 chr2 211964165 211964248 -38723606 + L2 LINE L2 3189 3272 0 272 232 232 26 chr2 211966929 211967066 -38720788 + MIR3 SINE MIR 32 186 -40 580 274 128 20 chr2 211967662 211967866 -38719988 - MIR SINE MIR -14 248 23 1933 168 3 0 chr2 211969333 211969636 -38718218 - AluJb SINE Alu -8 304 1 912 299 57 72 chr2 211970251 211970413 -38717441 + MLT1K LTR MaLR 24 187 -401 2637 58 0 0 chr2 211970413 211970724 -38717130 + AluY SINE Alu 1 311 0 912 299 57 72 chr2 211970724 211971120 -38716734 + MLT1K LTR MaLR 187 574 -14 2372 105 0 0 chr2 211971569 211971874 -38715980 - AluSc SINE Alu -4 305 1 215 30 0 30 chr2 211972513 211972546 -38715308 + (TTTTA)n Simple_repeat Simple_repeat 3 34 0 7027 37 5 0 chr2 211972546 211973850 -38714004 - L1PA4 LINE L1 -23 6132 4825 4810 19 0 2 chr2 211973841 211974431 -38713423 + L1PA4 LINE L1 4242 4830 -1316 * 361 188 26 17 chr2 211974834 211974951 -38712903 + GA-rich Low_complexity Low_complexity 3 120 0 31 0 0 0 chr2 211975104 211975135 -38712719 + AT_rich Low_complexity Low_complexity 1 31 0 238 314 0 35 chr2 211977129 211977215 -38710639 - MIR SINE MIR 0 262 180 487 287 48 37 chr2 211979103 211979291 -38708563 - L2 LINE L2 -214 3058 2869 2199 128 0 0 chr2 211979410 211979707 -38708147 - AluSx SINE Alu -15 297 1 2062 132 17 0 chr2 211979709 211979881 -38707973 - AluSx SINE Alu -12 300 119 261 0 0 0 chr2 211979881 211979910 -38707944 + (TG)n Simple_repeat Simple_repeat 2 30 0 2062 132 17 0 chr2 211979910 211980032 -38707822 - AluSx SINE Alu -193 119 1 180 0 0 0 chr2 211980479 211980499 -38707355 + (A)n Simple_repeat Simple_repeat 1 20 0 475 265 48 32 chr2 211981825 211982014 -38705840 - MER117 DNA MER1_type -5 192 1 520 284 139 9 chr2 211982942 211983169 -38704685 - MIR SINE MIR -3 259 3 2107 109 7 14 chr2 211983867 211984222 -38703632 + AluSx SINE Alu 1 312 0 21 36 0 0 chr2 211985087 211985115 -38702739 + AT_rich Low_complexity Low_complexity 1 28 0 7288 32 10 3 chr2 211986320 211987816 -38700038 + L1PA4 LINE L1 4655 6155 0 233 130 0 0 chr2 211988339 211988385 -38699469 + L1MC4 LINE L1 6658 6703 -1339 324 158 0 0 chr2 211988390 211988447 -38699407 + (TA)n Simple_repeat Simple_repeat 1 57 0 748 223 7 0 chr2 211988447 211988586 -38699268 - FRAM SINE Alu -26 150 11 1647 141 115 7 chr2 211989424 211989728 -38698126 + MER1B DNA MER1_type 1 337 0 1950 151 74 50 chr2 211991072 211991490 -38696364 + MSTA LTR MaLR 1 428 0 365 256 27 148 chr2 211991869 211992092 -38695762 - L2 LINE L2 -52 3220 3025 210 71 0 0 chr2 211992730 211992758 -38695096 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 625 260 133 5 chr2 211996112 211996308 -38691546 + MIR SINE MIR 21 241 -21 326 264 134 79 chr2 211996723 211997264 -38690590 + L2 LINE L2 2695 3276 -37 780 318 91 49 chr2 211997310 211997722 -38690132 - L2 LINE L2 -3 3310 2835 2260 107 0 7 chr2 211997722 211998031 -38689823 + AluSx SINE Alu 1 307 -5 780 318 91 49 chr2 211998031 211998351 -38689503 - L2 LINE L2 -478 2835 2530 282 29 0 0 chr2 212001275 212001310 -38686544 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 747 265 120 30 chr2 212003019 212003453 -38684401 + L1ME4a LINE L1 5384 5856 -265 27 62 0 0 chr2 212003719 212003767 -38684087 + AT_rich Low_complexity Low_complexity 1 48 0 302 271 0 42 chr2 212004149 212004245 -38683609 + L1MC4 LINE L1 6612 6703 -1339 243 0 0 0 chr2 212004245 212004272 -38683582 + (CA)n Simple_repeat Simple_repeat 2 28 0 276 100 0 0 chr2 212004943 212004983 -38682871 + (TTCA)n Simple_repeat Simple_repeat 3 42 0 2469 92 0 3 chr2 212006264 212006578 -38681276 + AluSq SINE Alu 1 313 0 324 342 17 8 chr2 212007750 212007870 -38679984 - MIR3 SINE MIR 0 208 88 239 263 35 0 chr2 212008714 212008771 -38679083 - L2 LINE L2 0 3313 3255 236 267 44 22 chr2 212009308 212009398 -38678456 - L2 LINE L2 -821 2493 2402 186 368 44 15 chr2 212010006 212010074 -38677780 + L2 LINE L2 3127 3196 -76 788 192 163 4 chr2 212010225 212010501 -38677353 + MER33 DNA MER1_type 5 324 0 2394 97 0 0 chr2 212010914 212011224 -38676630 + AluSq SINE Alu 1 310 -3 605 201 194 0 chr2 212011759 212011903 -38675951 + MER5A DNA MER1_type 11 182 -7 494 278 115 13 chr2 212012485 212012719 -38675135 + MIR SINE MIR 2 259 -3 189 0 0 0 chr2 212014467 212014488 -38673366 + (T)n Simple_repeat Simple_repeat 1 21 0 204 237 0 0 chr2 212015862 212015900 -38671954 - L2 LINE L2 -14 3299 3262 985 180 0 6 chr2 212016112 212016279 -38671575 + MER5A DNA MER1_type 23 188 -1 486 354 107 31 chr2 212016590 212016881 -38670973 + L2 LINE L2 2884 3196 -76 389 310 94 35 chr2 212017157 212017360 -38670494 - MIR SINE MIR -36 226 12 411 56 0 0 chr2 212017490 212017544 -38670310 + (CAT)n Simple_repeat Simple_repeat 2 55 0 730 289 119 70 chr2 212019089 212019628 -38668226 + L1ME LINE L1 696 1299 -4982 487 283 71 54 chr2 212019650 212019891 -38667963 + L1ME LINE L1 1255 1490 -4906 1404 164 0 8 chr2 212019891 212020129 -38667725 - MER46A DNA MER2_type 0 236 1 487 283 71 54 chr2 212020129 212020407 -38667447 + L1ME LINE L1 1490 1783 -4613 747 248 41 65 chr2 212020518 212020934 -38666920 + L1ME LINE L1 3311 3716 -2499 222 241 42 24 chr2 212020942 212021108 -38666746 + (TTAA)n Simple_repeat Simple_repeat 1 169 0 1360 260 29 2 chr2 212021163 212021575 -38666279 + L1ME LINE L1 3845 4267 -1948 * 1807 164 124 126 chr2 212021572 212022256 -38665598 + L1MD2 LINE L1 5664 6346 -13 180 259 37 0 chr2 212022528 212022582 -38665272 - MIR SINE MIR -22 240 185 809 247 21 11 chr2 212022660 212022850 -38665004 - MIR SINE MIR -65 197 6 180 125 0 0 chr2 212023898 212023930 -38663924 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 433 179 88 130 chr2 212023999 212024261 -38663593 + MER112 DNA MER1_type 2 252 -4 474 261 106 14 chr2 212024283 212024425 -38663429 + MIR SINE MIR 24 178 -84 1836 97 47 0 chr2 212025959 212026209 -38661645 + L1MA2 LINE L1 6014 6280 -24 207 69 0 0 chr2 212026209 212026238 -38661616 + (TA)n Simple_repeat Simple_repeat 2 30 0 1836 97 47 0 chr2 212026238 212026265 -38661589 + L1MA2 LINE L1 6280 6304 0 2482 83 0 6 chr2 212027151 212027463 -38660391 + AluSx SINE Alu 1 310 -2 203 272 48 29 chr2 212027813 212027916 -38659938 - MIR SINE MIR -71 191 87 1129 299 144 45 chr2 212028355 212028396 -38659458 + L3 LINE CR1 275 311 -1266 2359 83 0 3 chr2 212028396 212028698 -38659156 + AluSq SINE Alu 1 301 -12 1129 299 144 45 chr2 212028698 212028739 -38659115 + L3 LINE CR1 311 347 -1230 2484 73 3 0 chr2 212028739 212029042 -38658812 - AluSp SINE Alu -9 304 1 1129 299 144 45 chr2 212029042 212029835 -38658019 + L3 LINE CR1 347 1238 -339 224 220 34 17 chr2 212029877 212029936 -38657918 + L2 LINE L2 3208 3267 -5 442 332 106 20 chr2 212029943 212030244 -38657610 + L3 LINE CR1 1242 1568 -9 2168 111 7 3 chr2 212030250 212030547 -38657307 + AluSq SINE Alu 1 298 -15 281 214 174 10 chr2 212030565 212030663 -38657191 - L2 LINE L2 0 3313 3200 261 288 25 12 chr2 212031982 212032062 -38655792 + L2 LINE L2 3233 3313 0 2624 123 57 5 chr2 212032227 212032634 -38655220 + MSTA LTR MaLR 1 428 0 518 267 73 36 chr2 212032664 212032851 -38655003 + MIR3 SINE MIR 5 195 -13 266 366 35 17 chr2 212032918 212033090 -38654764 + L2 LINE L2 1798 1972 -1342 220 374 91 0 chr2 212033165 212033352 -38654502 + L2 LINE L2 2555 2758 -556 1555 153 0 71 chr2 212033457 212033644 -38654210 - AluJo SINE Alu -15 297 137 1976 148 3 3 chr2 212033644 212033942 -38653912 + AluSx SINE Alu 1 298 -14 1555 153 0 71 chr2 212033942 212034049 -38653805 - AluJo SINE Alu -175 137 24 237 205 51 26 chr2 212034058 212034136 -38653718 - MER117 DNA MER1_type -106 91 12 475 348 76 50 chr2 212034173 212034593 -38653261 + L2 LINE L2 2841 3271 -1 237 128 26 0 chr2 212034796 212034835 -38653019 - MIR SINE MIR -1 261 222 235 224 60 0 chr2 212035257 212035324 -38652530 - MER103 DNA DNA -47 119 49 2074 130 0 13 chr2 212035328 212035636 -38652218 + AluSg SINE Alu 3 306 -4 227 188 14 29 chr2 212038950 212039019 -38648835 + A-rich Low_complexity Low_complexity 4 71 0 861 233 35 0 chr2 212040284 212040486 -38647368 - MER3 DNA MER1_type 0 209 1 21 36 0 0 chr2 212041325 212041353 -38646501 + AT_rich Low_complexity Low_complexity 1 28 0 357 250 8 16 chr2 212041511 212041635 -38646219 + HAL1b LINE L1 541 663 -685 958 206 42 94 chr2 212041659 212042019 -38645835 + MLT1A1 LTR MaLR 25 365 0 592 242 7 78 chr2 212042019 212042288 -38645566 + HAL1b LINE L1 667 916 -432 234 196 0 0 chr2 212042545 212042596 -38645258 + L1ME4a LINE L1 5714 5764 -357 248 233 55 55 chr2 212042688 212042834 -38645020 + L1ME4a LINE L1 5927 6072 -49 677 227 6 18 chr2 212042855 212043018 -38644836 - L1PA16 LINE L1 -10 6156 5996 27 29 0 0 chr2 212043021 212043055 -38644799 + AT_rich Low_complexity Low_complexity 1 34 0 1794 228 143 31 chr2 212043659 212044370 -38643484 + L1ME2 LINE L1 5367 6157 -7 2331 99 3 0 chr2 212044373 212044676 -38643178 - AluSq SINE Alu -9 304 1 21 0 0 0 chr2 212045136 212045157 -38642697 + AT_rich Low_complexity Low_complexity 1 21 0 331 236 28 0 chr2 212045157 212045263 -38642591 + Charlie5 DNA MER1_type 12 120 -2492 1150 230 124 31 chr2 212045287 212045765 -38642089 - L2 LINE L2 -261 3052 2542 185 371 26 60 chr2 212045969 212046120 -38641734 - MIR SINE MIR -116 146 1 2258 96 0 0 chr2 212046158 212046451 -38641403 + AluY SINE Alu 1 293 -18 313 253 95 83 chr2 212046461 212046550 -38641304 - L1MC5 LINE L1 -48 7913 7827 2168 129 3 0 chr2 212046550 212046852 -38641002 + AluSx SINE Alu 1 303 -9 313 253 95 83 chr2 212046852 212047331 -38640523 - L1MC5 LINE L1 -134 7827 7335 771 210 70 30 chr2 212047331 212047531 -38640323 + MER3 DNA MER1_type 1 208 -1 313 253 95 83 chr2 212047531 212047553 -38640301 - L1MC5 LINE L1 -626 7335 7315 804 197 26 0 chr2 212047607 212047759 -38640095 - MER8 DNA MER2_type 0 239 84 1116 248 42 50 chr2 212047806 212048210 -38639644 + MLT1C LTR MaLR 67 467 0 463 268 54 19 chr2 212048403 212048678 -38639176 - L1MC4 LINE L1 -741 7220 6972 2172 290 113 36 chr2 212048820 212049309 -38638545 - L1MC4a LINE L1 -891 6917 6467 1366 152 71 113 chr2 212049309 212049525 -38638329 - MLT1A1 LTR MaLR 0 365 170 1673 173 20 7 chr2 212049525 212049825 -38638029 - AluJb SINE Alu -8 304 1 1366 152 71 113 chr2 212049825 212049989 -38637865 - MLT1A1 LTR MaLR -195 170 1 2172 290 113 36 chr2 212049989 212051044 -38636810 - L1MC4a LINE L1 -1341 6467 5254 195 152 0 0 chr2 212051638 212051684 -38636170 + (TTA)n Simple_repeat Simple_repeat 3 48 0 22 35 0 0 chr2 212051915 212051944 -38635910 + AT_rich Low_complexity Low_complexity 1 29 0 2952 91 27 52 chr2 212053827 212054311 -38633543 - L1PA13 LINE L1 0 6163 5692 218 261 0 0 chr2 212054460 212054506 -38633348 - MIR SINE MIR -8 254 209 469 317 200 19 chr2 212055476 212055989 -38631865 + L2 LINE L2 2665 3292 -21 838 210 33 50 chr2 212055997 212056292 -38631562 + MLT1D LTR MaLR 185 504 -1 2015 125 37 0 chr2 212056768 212057065 -38630789 - AluSc SINE Alu -1 308 1 615 235 117 11 chr2 212057446 212057625 -38630229 + MIR SINE MIR 35 232 -30 249 184 20 0 chr2 212058126 212058175 -38629679 - L2 LINE L2 -2 3270 3221 2349 107 11 35 chr2 212058474 212058847 -38629007 - THE1B LTR MaLR 0 364 1 23 0 0 0 chr2 212058972 212058995 -38628859 + AT_rich Low_complexity Low_complexity 1 23 0 247 273 186 37 chr2 212059442 212059603 -38628251 + L2 LINE L2 3128 3312 -1 190 224 20 20 chr2 212059999 212060048 -38627806 + L3 LINE CR1 674 722 -855 5055 52 0 0 chr2 212060368 212061009 -38626845 + L1PA6 LINE L1 5526 6166 0 254 274 14 14 chr2 212064462 212064535 -38623319 - L2 LINE L2 0 3313 3241 441 318 77 34 chr2 212064645 212064878 -38622976 - MIR SINE MIR 0 262 20 510 243 139 35 chr2 212064897 212065099 -38622755 - MIR SINE MIR 0 262 40 189 276 207 0 chr2 212066389 212066476 -38621378 - MIR SINE MIR -52 210 106 202 360 0 11 chr2 212066564 212066653 -38621201 + MER5B DNA MER1_type 2 89 -89 975 236 19 0 chr2 212066700 212066912 -38620942 - MER20 DNA MER1_type -3 216 1 1343 138 78 0 chr2 212067658 212067876 -38619978 + MER46A DNA MER2_type 2 236 0 27 0 0 0 chr2 212068171 212068198 -38619656 + AT_rich Low_complexity Low_complexity 1 27 0 2425 100 0 0 chr2 212070958 212071267 -38616587 + AluSc SINE Alu 1 309 0 32 43 0 0 chr2 212071339 212071385 -38616469 + AT_rich Low_complexity Low_complexity 1 46 0 200 329 196 0 chr2 212071430 212071588 -38616266 - L3 LINE CR1 -44 1533 1345 312 257 0 30 chr2 212071614 212071715 -38616139 + (TAAA)n Simple_repeat Simple_repeat 3 100 0 1293 313 104 44 chr2 212071739 212072514 -38615340 - L3 LINE CR1 -276 1301 420 1077 162 18 61 chr2 212072514 212072742 -38615112 - MER20 DNA MER1_type -1 218 1 1293 313 104 44 chr2 212072742 212072781 -38615073 - L3 LINE CR1 -1157 420 385 673 157 9 17 chr2 212073115 212073230 -38614624 + FLAM_C SINE Alu 3 116 -17 455 245 190 30 chr2 212073262 212073458 -38614396 + L1ME4a LINE L1 5726 5889 -232 1253 203 67 27 chr2 212073458 212073788 -38614066 + MER2 DNA MER2_type 2 344 0 455 245 190 30 chr2 212073788 212073922 -38613932 + L1ME4a LINE L1 5889 6109 -12 804 173 16 58 chr2 212074175 212074366 -38613488 - MER5A DNA MER1_type 0 189 7 426 271 52 11 chr2 212074504 212074627 -38613227 + MER63 DNA MER1_type 707 1054 -7 210 191 0 0 chr2 212077096 212077138 -38610716 + CT-rich Low_complexity Low_complexity 3 44 0 1965 154 0 3 chr2 212077267 212077560 -38610294 - AluSx SINE Alu -12 300 9 486 313 36 10 chr2 212077845 212078040 -38609814 - MIR3 SINE MIR -3 205 6 2244 108 0 0 chr2 212078272 212078619 -38609235 + AluSx SINE Alu 1 347 0 2305 96 0 3 chr2 212078636 212078939 -38608915 - AluSq SINE Alu -10 303 2 2304 99 0 7 chr2 212079607 212079910 -38607944 - AluSq SINE Alu -12 301 1 266 140 20 20 chr2 212080769 212080819 -38607035 - MIR SINE MIR -57 151 102 563 300 147 42 chr2 212081505 212081912 -38605942 - L2 LINE L2 -6 3307 2858 649 263 112 79 chr2 212082366 212082901 -38604953 - L2 LINE L2 -1159 2155 1594 2587 158 10 18 chr2 212082901 212083395 -38604459 - L1MB4 LINE L1 -3 6177 5688 649 263 112 79 chr2 212083395 212083505 -38604349 - L2 LINE L2 -1720 1594 1489 186 43 0 0 chr2 212083785 212083808 -38604046 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 21 57 0 0 chr2 212083924 212083959 -38603895 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 212086091 212086114 -38601740 + AT_rich Low_complexity Low_complexity 1 23 0 2038 89 71 0 chr2 212088283 212088578 -38599276 + AluSq SINE Alu 1 314 0 296 232 0 14 chr2 212091525 212091594 -38596260 + tRNA-Ile-ATT tRNA tRNA 7 74 -3 227 286 113 45 chr2 212091948 212092081 -38595773 - Charlie8 DNA MER1_type -2269 148 7 229 345 97 9 chr2 212092875 212092988 -38594866 - L2 LINE L2 -4 3309 3187 5925 210 68 36 chr2 212094055 212094781 -38593073 + L1MC4a LINE L1 5836 6537 -1271 525 16 0 0 chr2 212094781 212094843 -38593011 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 5925 210 68 36 chr2 212094843 212095980 -38591874 + L1MC4a LINE L1 6537 7793 -15 434 78 98 3 chr2 212096656 212096955 -38590899 + (TA)n Simple_repeat Simple_repeat 1 327 0 298 117 53 35 chr2 212096962 212097133 -38590721 + (TTATA)n Simple_repeat Simple_repeat 5 178 0 * 312 97 78 19 chr2 212097121 212097275 -38590579 + (TA)n Simple_repeat Simple_repeat 2 164 0 412 68 107 0 chr2 212097300 212097613 -38590241 + (TA)n Simple_repeat Simple_repeat 1 346 0 42 20 0 0 chr2 212097615 212097664 -38590190 + AT_rich Low_complexity Low_complexity 1 49 0 279 89 115 0 chr2 212097667 212097824 -38590030 + (TA)n Simple_repeat Simple_repeat 1 175 0 2074 139 0 3 chr2 212097844 212098139 -38589715 - AluSc SINE Alu -15 294 1 2450 89 0 0 chr2 212098997 212099301 -38588553 + AluSc SINE Alu 1 304 -5 2288 111 0 0 chr2 212099856 212100163 -38587691 + AluSq SINE Alu 1 307 -6 263 285 115 48 chr2 212100507 212100672 -38587182 + MER5B DNA MER1_type 3 178 0 193 295 16 16 chr2 212100862 212100923 -38586931 + MIR SINE MIR 201 261 -1 553 289 62 19 chr2 212101665 212101873 -38585981 + MIR SINE MIR 44 260 -2 199 338 43 52 chr2 212102265 212102570 -38585284 + L2 LINE L2 2555 2856 -458 180 111 0 0 chr2 212102575 212102602 -38585252 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 22 80 0 0 chr2 212102927 212102977 -38584877 + AT_rich Low_complexity Low_complexity 1 50 0 362 301 136 16 chr2 212103197 212103394 -38584460 + L1ME4a LINE L1 5768 5940 -181 1959 112 28 21 chr2 212103394 212103679 -38584175 + AluSg SINE Alu 1 287 -23 362 301 136 16 chr2 212103679 212103797 -38584057 + L1ME4a LINE L1 5940 6121 0 1637 194 7 0 chr2 212104949 212105228 -38582626 - AluJo SINE Alu -31 281 1 3503 165 84 26 chr2 212105436 212106218 -38581636 + L1MB8 LINE L1 5339 6166 -12 184 358 175 7 chr2 212108357 212108631 -38579223 - L2 LINE L2 -438 2876 2557 2179 111 3 16 chr2 212109269 212109576 -38578278 - AluSx SINE Alu -9 303 1 359 338 42 5 chr2 212109739 212109952 -38577902 - L1ME4a LINE L1 -202 5919 5699 1170 295 24 64 chr2 212110325 212110793 -38577061 - L3b LINE CR1 -24 1559 1111 296 317 166 14 chr2 212111306 212111451 -38576403 + MIR3 SINE MIR 1 167 -41 424 174 10 10 chr2 212111804 212111902 -38575952 + (TGGA)n Simple_repeat Simple_repeat 4 101 0 1074 121 0 79 chr2 212112519 212112709 -38575145 - AluSg/x SINE Alu -3 306 132 2301 101 7 0 chr2 212112709 212113007 -38574847 - AluSq SINE Alu -13 300 1 1855 119 35 42 chr2 212113960 212114274 -38573580 + AluSx SINE Alu 1 312 0 319 274 0 0 chr2 212114418 212114491 -38573363 - MIR SINE MIR -4 258 186 217 253 86 26 chr2 212115087 212115191 -38572663 + MIR SINE MIR 36 153 -65 288 293 0 0 chr2 212117184 212117259 -38570595 - MIR SINE MIR -173 89 15 455 316 20 76 chr2 212117279 212117621 -38570233 + L1M4 LINE L1 4871 5193 -953 430 293 27 16 chr2 212117659 212117915 -38569939 + L1M4 LINE L1 5290 5548 -636 202 314 0 43 chr2 212118878 212118948 -38568906 - MER5A DNA MER1_type -70 119 53 293 366 24 16 chr2 212119549 212119672 -38568182 + L3 LINE CR1 27 150 -1427 193 238 63 48 chr2 212119911 212119974 -38567880 - MER5B DNA MER1_type -100 78 15 2183 142 0 0 chr2 212121007 212121318 -38566536 - AluSx SINE Alu -1 311 1 770 209 5 64 chr2 212121400 212121587 -38566267 + FRAM SINE Alu 1 40 0 2297 124 8 21 chr2 212121876 212122256 -38565598 + THE1C LTR MaLR 1 375 0 521 268 67 0 chr2 212122683 212122847 -38565007 - MER45A DNA AcHobo 0 178 4 689 198 8 0 chr2 212123309 212123430 -38564424 + AluJ SINE Alu 1 122 -180 736 59 0 20 chr2 212123452 212123554 -38564300 - L1PA5 LINE L1 0 6154 6055 312 180 0 0 chr2 212123556 212123617 -38564237 + LTR2B LTR ERV1 430 490 0 510 108 0 0 chr2 212123622 212123696 -38564158 - tRNA-Glu-GAG tRNA tRNA 0 75 2 1306 116 0 32 chr2 212123716 212123906 -38563948 + AluJ SINE Alu 129 312 0 273 281 0 0 chr2 212123940 212124004 -38563850 + MIR SINE MIR 88 151 -111 317 365 18 41 chr2 212124159 212124329 -38563525 + MIR3 SINE MIR 25 190 -18 184 329 0 27 chr2 212124341 212124414 -38563440 - L2 LINE L2 -1 3271 3201 243 88 0 0 chr2 212128106 212128140 -38559714 + (A)n Simple_repeat Simple_repeat 1 34 0 256 305 80 25 chr2 212129756 212130069 -38557785 + LTR16B LTR ERVL 71 448 -2 207 0 0 0 chr2 212130592 212130615 -38557239 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 413 362 47 45 chr2 212130636 212131081 -38556773 + L3 LINE CR1 565 1010 -567 359 311 96 41 chr2 212131411 212131704 -38556150 - Charlie8 DNA MER1_type -1996 421 113 2230 70 3 7 chr2 212131706 212132038 -38555816 - AluSx SINE Alu 0 331 1 1356 207 81 55 chr2 212132369 212132868 -38554986 + MER39 LTR ERV1 1 698 -9 283 300 136 0 chr2 212132961 212133101 -38554753 - Tigger8 DNA MER2_type -58 608 450 338 340 0 0 chr2 212133159 212133309 -38554545 - Tigger8 DNA MER2_type -414 252 103 297 0 0 0 chr2 212133699 212133732 -38554122 + (CA)n Simple_repeat Simple_repeat 2 34 0 186 43 0 0 chr2 212133952 212133975 -38553879 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 339 269 9 46 chr2 212135657 212135765 -38552089 + L2 LINE L2 3210 3313 0 352 182 0 65 chr2 212135820 212135897 -38551957 - L2 LINE L2 -40 3273 3202 476 173 48 39 chr2 212135926 212136030 -38551824 + MER7A DNA MER2_type 1 103 -243 5209 174 29 7 chr2 212136046 212137686 -38550168 - L1MA5 LINE L1 0 6300 4624 420 92 0 0 chr2 212137726 212137791 -38550063 + L1 LINE L1 4534 4598 -1548 550 335 169 26 chr2 212137847 212138339 -38549515 - L3 LINE CR1 -98 1479 918 333 247 205 0 chr2 212138354 212138493 -38549361 - MER5A DNA MER1_type -13 176 4 21 0 0 0 chr2 212139243 212139264 -38548590 + AT_rich Low_complexity Low_complexity 1 21 0 2163 113 0 19 chr2 212139748 212140059 -38547795 - AluSg1 SINE Alu -4 305 1 216 287 225 31 chr2 212141198 212141327 -38546527 + L2 LINE L2 3160 3313 0 906 117 0 0 chr2 212141773 212141893 -38545961 + AluSq/x SINE Alu 1 120 -193 989 122 6 47 chr2 212141893 212142065 -38545789 + THE1B LTR MaLR 2 166 -198 1436 122 24 35 chr2 212142074 212142328 -38545526 + THE1B LTR MaLR 108 358 -6 1147 162 96 1 chr2 212144443 212144735 -38543119 - MER33 DNA MER1_type -19 305 1 26 30 0 0 chr2 212144929 212144962 -38542892 + AT_rich Low_complexity Low_complexity 1 33 0 365 272 78 50 chr2 212144970 212145150 -38542704 + MIR SINE MIR 64 248 -14 352 309 16 16 chr2 212145395 212145521 -38542333 + CT-rich Low_complexity Low_complexity 1 126 0 1996 143 7 3 chr2 212145800 212146101 -38541753 - AluSg SINE Alu -8 302 1 2299 104 0 3 chr2 212146118 212146427 -38541427 - AluSx SINE Alu -4 308 1 344 250 8 0 chr2 212146618 212146746 -38541108 + (TG)n Simple_repeat Simple_repeat 1 129 0 23 0 0 0 chr2 212147553 212147576 -38540278 + AT_rich Low_complexity Low_complexity 1 23 0 2224 99 0 0 chr2 212147576 212147868 -38539986 - AluSx SINE Alu -20 292 1 2016 129 0 11 chr2 212147878 212148218 -38539636 - AluSx SINE Alu 0 337 1 292 289 192 0 chr2 212148741 212148845 -38539009 + L2 LINE L2 3190 3313 0 28 0 0 0 chr2 212149226 212149254 -38538600 + AT_rich Low_complexity Low_complexity 1 28 0 419 305 40 28 chr2 212150114 212150291 -38537563 - MIR SINE MIR -19 243 65 789 247 30 43 chr2 212150297 212150528 -38537326 + MIR SINE MIR 20 247 -15 854 191 7 0 chr2 212152235 212152376 -38535478 + FRAM SINE Alu 1 142 -34 198 0 0 0 chr2 212152378 212152400 -38535454 + (CTA)n Simple_repeat Simple_repeat 1 22 0 228 231 108 100 chr2 212152462 212152592 -38535262 - L2 LINE L2 -218 3054 2924 223 340 75 48 chr2 212152786 212152974 -38534880 - L2 LINE L2 -650 2664 2472 2227 107 3 3 chr2 212154718 212155027 -38532827 + AluSc SINE Alu 1 309 0 282 116 0 0 chr2 212156432 212156475 -38531379 + (GA)n Simple_repeat Simple_repeat 1 43 0 547 189 0 23 chr2 212156475 212156607 -38531247 + L1MC4 LINE L1 7914 8042 0 485 114 0 23 chr2 212157647 212157735 -38530119 + (TTCC)n Simple_repeat Simple_repeat 4 89 0 1989 121 46 0 chr2 212157750 212158030 -38529824 - AluSx SINE Alu -19 293 1 248 289 26 0 chr2 212160321 212160397 -38527457 + MER81 DNA DNA 1 78 -36 284 252 126 9 chr2 212160896 212161007 -38526847 + L2 LINE L2 3189 3312 -1 736 254 68 10 chr2 212161449 212161654 -38526200 - L3b LINE CR1 -85 1498 1282 21 0 0 0 chr2 212161692 212161713 -38526141 + AT_rich Low_complexity Low_complexity 1 21 0 252 0 0 0 chr2 212162254 212162282 -38525572 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 443 289 154 13 chr2 212162339 212162488 -38525366 + MER5A DNA MER1_type 19 188 -1 711 252 124 9 chr2 212162544 212162762 -38525092 - MIR SINE MIR -18 244 2 396 356 116 21 chr2 212162817 212163146 -38524708 - L2 LINE L2 -626 2688 2329 22 35 0 0 chr2 212163934 212163963 -38523891 + AT_rich Low_complexity Low_complexity 1 29 0 4783 146 23 45 chr2 212166447 212166905 -38520949 + L1MA8 LINE L1 5344 5811 -480 2428 100 0 0 chr2 212166905 212167215 -38520639 + AluSg SINE Alu 1 310 0 4783 146 23 45 chr2 212167215 212167569 -38520285 + L1MA8 LINE L1 5811 6134 -157 2228 66 4 11 chr2 212167569 212167843 -38520011 + AluY SINE Alu 29 300 -11 4783 146 23 45 chr2 212167843 212167992 -38519862 + L1MA8 LINE L1 6134 6285 -6 353 22 22 0 chr2 212167992 212168038 -38519816 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 279 308 83 45 chr2 212168056 212168212 -38519642 - MIR SINE MIR -35 227 66 376 229 42 34 chr2 212169001 212169119 -38518735 + L2 LINE L2 3096 3214 -99 2449 64 6 10 chr2 212169290 212169602 -38518252 - AluY SINE Alu 0 311 1 285 250 0 0 chr2 212169700 212169756 -38518098 + L2 LINE L2 3239 3294 -19 314 337 21 0 chr2 212170809 212170904 -38516950 - MER91A DNA MER1_type -82 114 18 1036 228 59 64 chr2 212171608 212172067 -38515787 - MLT1D LTR MaLR 0 505 1 727 299 51 0 chr2 212172067 212172301 -38515553 - MIR SINE MIR -4 258 13 1439 169 166 36 chr2 212172540 212172955 -38514899 + LTR54B LTR ERV1 1 361 -137 1668 179 0 41 chr2 212172955 212173273 -38514581 - AluJb SINE Alu -7 305 1 2378 91 3 0 chr2 212173276 212173573 -38514281 - AluSp SINE Alu -15 298 1 1439 169 166 36 chr2 212173573 212173592 -38514262 + LTR54B LTR ERV1 362 496 -2 286 358 17 8 chr2 212175051 212175171 -38512683 - MIR SINE MIR -117 145 25 1272 158 19 85 chr2 212175437 212175571 -38512283 - AluJo SINE Alu -69 243 133 2013 105 17 17 chr2 212175571 212175866 -38511988 + AluSx SINE Alu 16 310 -2 1272 158 19 85 chr2 212175866 212175990 -38511864 - AluJo SINE Alu -179 133 2 283 297 10 10 chr2 212176244 212176345 -38511509 + CT-rich Low_complexity Low_complexity 4 104 0 308 280 86 0 chr2 212177517 212177610 -38510244 + MIR SINE MIR 49 149 -113 183 186 0 0 chr2 212177768 212177811 -38510043 + (CA)n Simple_repeat Simple_repeat 1 43 0 244 0 56 0 chr2 212178336 212178372 -38509482 + (TA)n Simple_repeat Simple_repeat 1 38 0 239 234 62 0 chr2 212178558 212178622 -38509232 + MIR SINE MIR 183 250 -12 207 322 0 0 chr2 212178633 212178692 -38509162 + (CTA)n Simple_repeat Simple_repeat 1 59 0 591 297 35 19 chr2 212178835 212179091 -38508763 - MIR SINE MIR -2 260 1 230 333 93 9 chr2 212179105 212179213 -38508641 + MIR3 SINE MIR 65 181 -27 21 0 0 0 chr2 212181034 212181055 -38506799 + AT_rich Low_complexity Low_complexity 1 21 0 378 42 0 0 chr2 212181228 212181276 -38506578 + (CA)n Simple_repeat Simple_repeat 2 49 0 289 180 115 40 chr2 212181676 212181815 -38506039 + MIR SINE MIR 59 262 0 1385 152 16 19 chr2 212185445 212185702 -38502152 - MLT1A1 LTR MaLR 0 365 110 3318 174 5 180 chr2 212185707 212186875 -38500979 - MLT1A1-int LTR MaLR -770 965 2 1790 182 45 8 chr2 212186876 212187228 -38500626 - MLT1A1 LTR MaLR 0 365 1 657 269 70 40 chr2 212187874 212187910 -38499944 + MIR SINE MIR 18 51 -211 1826 150 46 75 chr2 212187910 212188349 -38499505 - MSTC LTR MaLR -2 426 1 657 269 70 40 chr2 212188349 212188539 -38499315 + MIR SINE MIR 51 251 -11 320 256 166 34 chr2 212190319 212190687 -38497167 + MLT1K LTR MaLR 146 582 -6 285 200 0 17 chr2 212191475 212191535 -38496319 + MIR SINE MIR 92 150 -112 476 194 163 0 chr2 212191588 212191717 -38496137 - MIR SINE MIR -29 233 84 180 319 0 14 chr2 212192639 212192711 -38495143 - MIR SINE MIR 0 262 192 542 147 11 0 chr2 212194122 212194217 -38493637 + L1MB2 LINE L1 6067 6162 -9 1296 132 9 18 chr2 212194425 212194644 -38493210 + AluJo SINE Alu 87 303 -9 2679 139 56 9 chr2 212194733 212195179 -38492675 + MER101 LTR ERV1 1 467 -7 300 226 0 0 chr2 212195370 212195432 -38492422 + L1MC4 LINE L1 6642 6703 -1339 26 0 0 0 chr2 212195446 212195472 -38492382 + AT_rich Low_complexity Low_complexity 1 26 0 493 117 0 0 chr2 212196429 212196506 -38491348 + MER101 LTR ERV1 393 469 -5 2177 133 0 3 chr2 212198830 212199139 -38488715 - AluSx SINE Alu -4 308 1 463 364 46 11 chr2 212199693 212200061 -38487793 + L2 LINE L2 1815 2195 -1119 316 294 106 73 chr2 212200073 212200386 -38487468 + L2 LINE L2 2729 3054 -218 865 242 43 23 chr2 212200460 212200699 -38487155 - MIR SINE MIR 0 262 18 194 333 176 0 chr2 212200680 212200782 -38487072 + L2 LINE L2 3106 3225 -47 * 354 302 106 13 chr2 212200923 212201158 -38486696 - MIR SINE MIR -1 261 5 2323 98 13 3 chr2 212202064 212202369 -38485485 - AluSq SINE Alu -5 308 1 26 30 0 0 chr2 212203416 212203449 -38484405 + AT_rich Low_complexity Low_complexity 1 33 0 625 282 78 32 chr2 212205160 212205444 -38482410 + MLT1J LTR MaLR 210 506 -5 2304 107 0 0 chr2 212205751 212206051 -38481803 - AluSx SINE Alu -12 300 1 224 195 0 0 chr2 212206412 212206453 -38481401 + (TG)n Simple_repeat Simple_repeat 1 41 0 2257 120 0 0 chr2 212207332 212207640 -38480214 - AluSg SINE Alu -2 308 1 252 184 0 20 chr2 212207645 212207694 -38480160 + MLT1L LTR MaLR 568 615 0 1094 129 40 5 chr2 212207780 212207982 -38479872 - L1MA1 LINE L1 0 6302 6094 197 182 130 117 chr2 212208871 212208948 -38478906 + MIR SINE MIR 118 195 -67 218 312 123 13 chr2 212210321 212210475 -38477379 + L2 LINE L2 2919 3089 -183 262 301 0 0 chr2 212211328 212211401 -38476453 - MIR SINE MIR 0 262 190 288 273 0 34 chr2 212213689 212213777 -38474077 + L2 LINE L2 2205 2289 -1025 1100 214 51 34 chr2 212214083 212214434 -38473420 - L1M4 LINE L1 -872 5274 4918 213 39 0 0 chr2 212216516 212216542 -38471312 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 207 0 0 0 chr2 212216656 212216679 -38471175 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 772 279 25 83 chr2 212217034 212217482 -38470372 + L1MEd LINE L1 583 1004 -5368 688 184 0 0 chr2 212217538 212217652 -38470202 + Tigger4(Zombi) DNA MER2_type 1 114 -2617 * 3338 116 14 0 chr2 212217650 212218149 -38469705 + Tigger4(Zombi) DNA MER2_type 2226 2731 0 281 300 114 26 chr2 212218250 212218557 -38469297 + L1MEd LINE L1 1262 1595 -4789 343 308 38 0 chr2 212219078 212219263 -38468591 + L1MEd LINE L1 2351 2542 -3840 737 279 117 52 chr2 212219266 212219635 -38468219 - L2 LINE L2 -8 3305 2913 233 304 72 24 chr2 212219647 212219772 -38468082 - L2 LINE L2 -731 2583 2453 25 31 0 0 chr2 212220311 212220343 -38467511 + AT_rich Low_complexity Low_complexity 1 32 0 347 373 40 27 chr2 212221461 212221611 -38466243 + L2 LINE L2 3121 3272 0 3614 217 41 35 chr2 212221768 212222605 -38465249 + MER21B LTR ERV1 1 842 -21 2451 32 0 3 chr2 212222963 212223274 -38464580 + AluY SINE Alu 1 310 0 225 0 0 0 chr2 212223813 212223838 -38464016 + (T)n Simple_repeat Simple_repeat 1 25 0 245 362 23 76 chr2 212223863 212224167 -38463687 + L2 LINE L2 201 488 -2826 339 308 54 23 chr2 212225544 212225674 -38462180 + L2 LINE L2 3171 3304 -9 203 325 34 68 chr2 212226895 212226969 -38460885 + MIR SINE MIR 21 91 -171 2288 122 0 0 chr2 212226969 212227280 -38460574 - AluSx SINE Alu -1 311 1 203 325 34 68 chr2 212227280 212227322 -38460532 + MIR SINE MIR 91 133 -129 1197 132 6 0 chr2 212228738 212228920 -38458934 + AluSg/x SINE Alu 121 303 -9 2495 55 7 3 chr2 212229020 212229328 -38458526 + AluY SINE Alu 1 309 -2 330 26 0 0 chr2 212229507 212229546 -38458308 + (CCA)n Simple_repeat Simple_repeat 1 39 0 1779 172 0 43 chr2 212229684 212230010 -38457844 + AluJb SINE Alu 1 312 0 1815 283 44 14 chr2 212232552 212233142 -38454712 + L1MEc LINE L1 35 642 -5754 854 232 57 60 chr2 212233172 212233504 -38454350 + L1M4 LINE L1 3410 3740 -2406 465 317 21 0 chr2 212234011 212234156 -38453698 - MIR SINE MIR -1 261 114 445 232 148 14 chr2 212234489 212234631 -38453223 + MIR SINE MIR 91 251 -11 363 201 110 91 chr2 212234730 212234748 -38453106 + MIR SINE MIR 94 110 -152 2371 82 3 0 chr2 212234748 212235042 -38452812 - AluSp SINE Alu -18 295 1 363 201 110 91 chr2 212235042 212235177 -38452677 + MIR SINE MIR 110 250 -12 270 73 0 0 chr2 212237951 212237992 -38449862 + (CA)n Simple_repeat Simple_repeat 2 42 0 723 104 0 0 chr2 212238971 212239077 -38448777 + (TA)n Simple_repeat Simple_repeat 2 107 0 2366 87 0 10 chr2 212239077 212239377 -38448477 - AluSq SINE Alu -16 297 1 22 56 0 0 chr2 212239380 212239416 -38448438 + AT_rich Low_complexity Low_complexity 1 36 0 24 67 0 0 chr2 212239437 212239482 -38448372 + AT_rich Low_complexity Low_complexity 1 45 0 635 185 8 8 chr2 212239482 212239601 -38448253 - FLAM_A SINE Alu -14 119 1 271 302 191 8 chr2 212239696 212239822 -38448032 + L2 LINE L2 3121 3269 -3 1829 140 32 7 chr2 212240534 212240839 -38447015 + AluSq SINE Alu 1 312 0 455 258 41 5 chr2 212241158 212241320 -38446534 - L1MEc LINE L1 -2247 3968 3808 954 141 32 0 chr2 212241335 212241491 -38446363 - MLT1B LTR MaLR -43 347 187 1250 271 91 15 chr2 212241496 212242091 -38445763 - L1MEc LINE L1 -2412 3803 3164 1342 236 7 11 chr2 212242092 212242368 -38445486 + Tigger7 DNA MER2_type 1 275 -458 466 159 0 57 chr2 212242391 212242479 -38445375 + Tigger7 DNA MER2_type 2505 2587 0 1739 183 0 7 chr2 212242487 212242788 -38445066 - AluJb SINE Alu -13 299 1 2440 251 32 12 chr2 212242788 212243609 -38444245 - L1MEc LINE L1 -3057 3158 2322 820 193 0 0 chr2 212243613 212243753 -38444101 - FRAM SINE Alu -36 140 1 362 206 200 0 chr2 212243764 212243919 -38443935 - L1MEc LINE L1 -4080 2316 2131 1697 180 67 6 chr2 212243977 212244322 -38443532 + MER47A DNA MER2_type 1 366 0 3421 264 80 35 chr2 212244322 212245485 -38442369 - L1MEc LINE L1 -4428 1968 712 1269 226 66 11 chr2 212245485 212245759 -38442095 - AluJo SINE Alu -23 289 1 3421 264 80 35 chr2 212245759 212246203 -38441651 - L1MEc LINE L1 -5684 712 289 2022 143 0 33 chr2 212246290 212246597 -38441257 + AluJb SINE Alu 1 297 -15 22269 148 22 36 chr2 212246702 212251587 -38436267 + L1MA2 LINE L1 22 4973 -2751 2191 77 4 0 chr2 212251587 212251861 -38435993 + AluY SINE Alu 1 275 -36 431 157 0 0 chr2 212251863 212251933 -38435921 + AluS SINE Alu 232 301 -11 22269 148 22 36 chr2 212251933 212252015 -38435839 + L1MA2 LINE L1 4974 5056 -2668 2082 141 115 20 chr2 212252015 212252406 -38435448 + MSTA LTR MaLR 1 428 0 22269 148 22 36 chr2 212252406 212252966 -38434888 + L1MA2 LINE L1 5056 7223 -501 242 0 0 89 chr2 212252965 212253010 -38434844 + L1PA6 LINE L1 6114 6154 0 * 1863 86 28 102 chr2 212253147 212253508 -38434346 + L1MA2 LINE L1 7218 7551 -172 2386 80 0 6 chr2 212253526 212253839 -38434015 - AluY SINE Alu 0 311 1 942 93 0 8 chr2 212253841 212253970 -38433884 - AluY SINE Alu -8 303 176 1034 123 18 0 chr2 212253972 212254142 -38433712 + L1MA3 LINE L1 6132 6304 -1 234 0 0 0 chr2 212254277 212254303 -38433551 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 563 295 107 5 chr2 212255389 212255623 -38432231 - MIR SINE MIR -6 256 5 1481 82 24 0 chr2 212255809 212256015 -38431839 - L1PA13 LINE L1 -1 6162 5952 188 57 0 57 chr2 212256165 212256200 -38431654 + (CAGAGA)n Simple_repeat Simple_repeat 4 36 0 586 279 33 50 chr2 212256334 212256574 -38431280 - L3 LINE CR1 -477 1100 865 246 383 9 0 chr2 212256567 212256674 -38431180 - L2 LINE L2 -5 3267 3160 * 962 311 87 37 chr2 212256718 212257425 -38430429 + L2 LINE L2 2574 3308 -5 719 331 66 9 chr2 212257512 212257829 -38430025 - L2 LINE L2 -339 2975 2641 * 826 220 30 25 chr2 212257825 212258025 -38429829 - L3 LINE CR1 -722 855 655 2129 135 0 0 chr2 212258833 212259129 -38428725 - AluSx SINE Alu -16 296 1 22 0 0 0 chr2 212259458 212259480 -38428374 + AT_rich Low_complexity Low_complexity 1 22 0 2080 131 10 3 chr2 212259735 212260032 -38427822 + AluSg SINE Alu 1 299 -11 315 315 0 0 chr2 212260041 212260130 -38427724 - L1MC4 LINE L1 -1339 6703 6615 290 196 10 59 chr2 212260149 212260251 -38427603 - L1MC4 LINE L1 -1341 6701 6605 430 254 50 123 chr2 212260739 212261098 -38426756 + MLT1J LTR MaLR 110 442 -69 309 239 63 31 chr2 212261416 212261557 -38426297 - L1ME4a LINE L1 -11 6110 5962 1702 212 21 0 chr2 212261557 212261896 -38425958 - MER7A DNA MER2_type -1 345 2 309 239 63 31 chr2 212261896 212261913 -38425941 - L1ME4a LINE L1 -159 5962 5947 239 277 63 50 chr2 212261929 212262088 -38425766 - L1ME4a LINE L1 -219 5902 5742 315 226 94 63 chr2 212262320 212262479 -38425375 - L1ME4a LINE L1 -2390 5418 5255 22 0 0 0 chr2 212263788 212263810 -38424044 + AT_rich Low_complexity Low_complexity 1 22 0 312 296 0 20 chr2 212264345 212264443 -38423411 - 7SK RNA RNA -95 98 3 446 333 30 7 chr2 212264843 212264978 -38422876 + MIR SINE MIR 10 147 -115 418 223 61 61 chr2 212265535 212265683 -38422171 - MER103 DNA DNA -2 164 17 298 244 101 42 chr2 212266441 212266560 -38421294 + L2 LINE L2 3187 3312 -1 479 332 43 7 chr2 212267223 212267524 -38420330 + L1ME4a LINE L1 5522 5833 -288 41 0 0 0 chr2 212267675 212267716 -38420138 + AT_rich Low_complexity Low_complexity 1 41 0 751 189 0 0 chr2 212267716 212267843 -38420011 - FLAM_C SINE Alu -6 127 1 1605 107 24 0 chr2 212267877 212268129 -38419725 - L1MA2 LINE L1 -5 6299 6042 45 45 0 0 chr2 212268293 212268359 -38419495 + AT_rich Low_complexity Low_complexity 1 66 0 21920 27 0 0 chr2 212268541 212271168 -38416686 - L1P LINE L1 -990 5156 2530 4631 28 0 0 chr2 212271168 212271710 -38416144 + L1PA2 LINE L1 5611 6154 -1 13978 81 10 0 chr2 212271804 212274548 -38413306 + L1PA7 LINE L1 3477 6233 0 2369 83 3 0 chr2 212276070 212276371 -38411483 - AluSp SINE Alu -11 302 1 711 300 71 12 chr2 212276713 212276953 -38410901 - L3 LINE CR1 -316 1261 1008 190 246 0 18 chr2 212277040 212277097 -38410757 - L3 LINE CR1 -709 868 813 286 297 117 72 chr2 212277101 212277350 -38410504 + L2 LINE L2 3054 3313 0 246 361 210 28 chr2 212277691 212278153 -38409701 - L3 LINE CR1 -985 592 47 303 140 0 0 chr2 212278410 212278460 -38409394 + (TG)n Simple_repeat Simple_repeat 2 51 0 359 293 30 20 chr2 212278706 212278805 -38409049 + L2 LINE L2 3172 3271 -1 33 25 0 0 chr2 212279045 212279085 -38408769 + AT_rich Low_complexity Low_complexity 1 40 0 389 225 153 0 chr2 212279557 212279668 -38408186 - L3b LINE CR1 -181 1402 1275 242 275 8 123 chr2 212280583 212280827 -38407027 + L1M4 LINE L1 3827 4042 -2104 387 0 0 0 chr2 212280851 212280894 -38406960 + (CA)n Simple_repeat Simple_repeat 1 43 0 412 297 114 46 chr2 212280940 212281334 -38406520 + L1M4 LINE L1 4628 5048 -1098 230 171 0 0 chr2 212282101 212282142 -38405712 - MER116 DNA Mariner -5 75 35 229 172 17 17 chr2 212282808 212282828 -38405026 + A-rich Low_complexity Low_complexity 5 24 -38 2110 98 0 49 chr2 212282828 212283135 -38404719 + AluSx SINE Alu 1 292 -20 229 172 17 17 chr2 212283135 212283172 -38404682 + A-rich Low_complexity Low_complexity 23 62 0 29 28 0 0 chr2 212285461 212285497 -38402357 + AT_rich Low_complexity Low_complexity 1 36 0 924 181 0 0 chr2 212285906 212286055 -38401799 + FRAM SINE Alu 1 146 -30 709 276 28 18 chr2 212286091 212286308 -38401546 + MIR SINE MIR 23 241 -21 409 268 65 22 chr2 212286560 212286698 -38401156 + MIR SINE MIR 117 260 -2 477 217 123 7 chr2 212287202 212287352 -38400502 - MIR3 SINE MIR -3 205 37 201 129 0 0 chr2 212288755 212288786 -38399068 + (GA)n Simple_repeat Simple_repeat 2 32 0 192 77 0 0 chr2 212289117 212289143 -38398711 + (T)n Simple_repeat Simple_repeat 1 26 0 297 328 176 48 chr2 212289616 212289973 -38397881 + L2 LINE L2 2870 3272 0 261 318 43 107 chr2 212290642 212290969 -38396885 + L2 LINE L2 2917 3222 -50 21 0 0 0 chr2 212291822 212291843 -38396011 + AT_rich Low_complexity Low_complexity 1 21 0 228 35 0 0 chr2 212292643 212292672 -38395182 + (CA)n Simple_repeat Simple_repeat 2 30 0 493 268 128 0 chr2 212292960 212293124 -38394730 + MIR SINE MIR 5 189 -73 233 209 0 0 chr2 212293126 212293169 -38394685 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2390 70 0 0 chr2 212293180 212293466 -38394388 - AluY SINE Alu -25 286 1 1231 231 112 76 chr2 212293689 212294152 -38393702 + MLT2B1 LTR ERVL 1 485 -35 396 0 0 0 chr2 212294152 212294196 -38393658 + (CA)n Simple_repeat Simple_repeat 1 44 0 1231 231 112 76 chr2 212294196 212294234 -38393620 + MLT2B1 LTR ERVL 485 520 0 201 318 159 13 chr2 212294704 212294855 -38392999 + L2 LINE L2 2890 3062 -210 462 304 173 24 chr2 212294910 212295246 -38392608 + MLT1J2 LTR MaLR 37 422 -28 2438 83 0 0 chr2 212295615 212295916 -38391938 - AluY SINE Alu -10 301 1 1002 214 48 0 chr2 212296274 212296484 -38391370 + MER58A DNA MER1_type 5 224 0 5024 115 87 0 chr2 212298195 212299067 -38388787 - Tigger3b DNA MER2_type -3 1228 281 675 144 0 0 chr2 212299066 212299163 -38388691 - Tigger3b DNA MER2_type -1134 97 1 * 1116 79 33 20 chr2 212299460 212299612 -38388242 - AluY SINE Alu -14 297 144 1038 129 0 114 chr2 212299699 212299901 -38387953 - AluSp SINE Alu -132 181 3 330 345 197 10 chr2 212299986 212300189 -38387665 + MIR SINE MIR 14 254 -8 433 263 139 21 chr2 212300356 212300694 -38387160 + L1ME4a LINE L1 5739 6116 -5 223 298 138 21 chr2 212304412 212304506 -38383348 - L2 LINE L2 -5 3308 3204 306 309 0 25 chr2 212304532 212304613 -38383241 - MIR SINE MIR -174 88 10 26 50 0 0 chr2 212304709 212304749 -38383105 + AT_rich Low_complexity Low_complexity 1 40 0 25 31 0 0 chr2 212305007 212305039 -38382815 + AT_rich Low_complexity Low_complexity 1 32 0 198 0 0 0 chr2 212306741 212306763 -38381091 + (CTG)n Simple_repeat Simple_repeat 2 23 0 270 267 99 23 chr2 212306820 212306951 -38380903 - MIR SINE MIR -57 205 65 198 143 0 0 chr2 212307114 212307149 -38380705 + (A)n Simple_repeat Simple_repeat 1 35 0 2292 87 3 0 chr2 212307697 212307995 -38379859 + AluSp SINE Alu 1 299 -14 25 0 0 0 chr2 212308493 212308518 -38379336 + AT_rich Low_complexity Low_complexity 1 25 0 467 202 11 0 chr2 212308822 212308916 -38378938 - MIR3 SINE MIR -5 203 109 188 295 51 39 chr2 212308978 212309056 -38378798 - MIR3 SINE MIR -124 84 6 22 0 0 0 chr2 212309445 212309467 -38378387 + AT_rich Low_complexity Low_complexity 1 22 0 327 49 0 0 chr2 212309605 212309646 -38378208 + (TC)n Simple_repeat Simple_repeat 1 41 0 437 347 17 23 chr2 212309988 212310161 -38377693 - MIR SINE MIR -14 248 77 447 324 111 19 chr2 212310261 212310477 -38377377 - MIR SINE MIR -20 242 7 237 206 123 14 chr2 212310567 212310640 -38377214 - MER20 DNA MER1_type 0 219 139 1455 114 0 10 chr2 212312153 212312405 -38375449 - AluSq SINE Alu 0 336 87 234 0 0 0 chr2 212313078 212313104 -38374750 + (TG)n Simple_repeat Simple_repeat 2 27 0 715 217 91 7 chr2 212313458 212313601 -38374253 - FAM SINE Alu -16 159 5 246 62 0 0 chr2 212315881 212315913 -38371941 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 467 299 113 27 chr2 212317032 212317253 -38370601 + MIR SINE MIR 23 262 0 273 302 114 7 chr2 212317336 212317485 -38370369 + MLT1H LTR MaLR 29 193 -356 601 271 94 20 chr2 212317986 212318189 -38369665 - MIR SINE MIR -4 258 41 479 227 52 32 chr2 212318283 212318437 -38369417 - MIR SINE MIR -73 189 33 273 217 0 17 chr2 212319562 212319622 -38368232 - MIR3 SINE MIR -30 178 120 479 300 63 32 chr2 212321181 212321371 -38366483 - MIR SINE MIR -46 216 21 4409 25 0 2 chr2 212321504 212322019 -38365835 - L1PA3 LINE L1 -3 6152 5639 2242 21 0 0 chr2 212322019 212322300 -38365554 + L1P1 LINE L1 5294 5574 -581 32 81 0 0 chr2 212322340 212322414 -38365440 + AT_rich Low_complexity Low_complexity 1 74 0 7042 56 0 0 chr2 212322874 212324521 -38363333 - L1PA5 LINE L1 -4 6150 4501 641 110 0 0 chr2 212324525 212324616 -38363238 + L1P LINE L1 11 101 -6045 * 14532 81 15 16 chr2 212324611 212326310 -38361544 + L1P LINE L1 623 2320 -3826 207 0 0 0 chr2 212326310 212326333 -38361521 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 14532 81 15 16 chr2 212326333 212326788 -38361066 + L1P LINE L1 2320 2774 -3372 1658 137 49 21 chr2 212326790 212327119 -38360735 - L1MA8 LINE L1 -13 6278 5941 378 0 0 0 chr2 212327673 212327715 -38360139 + (CA)n Simple_repeat Simple_repeat 1 42 0 927 264 9 0 chr2 212327921 212328137 -38359717 - MER20 DNA MER1_type -1 218 1 670 137 0 0 chr2 212328549 212328651 -38359203 + AluS SINE Alu 1 102 -211 27 49 0 0 chr2 212329181 212329222 -38358632 + AT_rich Low_complexity Low_complexity 1 41 0 183 307 40 13 chr2 212329660 212329735 -38358119 + L2 LINE L2 652 728 -2586 241 123 46 31 chr2 212329748 212329813 -38358041 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 2024 117 44 3 chr2 212330911 212331209 -38356645 + AluSx SINE Alu 1 310 -2 2454 44 0 7 chr2 212331265 212331559 -38356295 - AluY SINE Alu -19 292 1 233 204 0 0 chr2 212333778 212333827 -38354027 - MLT1I LTR MaLR -263 146 98 194 306 21 164 chr2 212334856 212335015 -38352839 + L2 LINE L2 3006 3111 -161 2278 85 0 3 chr2 212335015 212335327 -38352527 - AluSg SINE Alu 0 313 3 194 306 21 164 chr2 212335327 212335447 -38352407 + L2 LINE L2 3111 3246 -26 22 0 0 0 chr2 212337418 212337440 -38350414 + AT_rich Low_complexity Low_complexity 1 22 0 236 294 0 59 chr2 212339267 212339352 -38348502 - MIR3 SINE MIR -4 204 125 655 267 68 41 chr2 212339914 212340204 -38347650 + MLT1H LTR MaLR 57 318 -231 203 182 23 0 chr2 212340529 212340573 -38347281 + CT-rich Low_complexity Low_complexity 5 49 0 244 291 60 44 chr2 212340813 212340995 -38346859 + L2 LINE L2 3115 3299 -14 201 209 23 0 chr2 212341005 212341048 -38346806 + L2 LINE L2 3268 3311 -2 225 197 49 0 chr2 212341208 212341269 -38346585 + (TTTG)n Simple_repeat Simple_repeat 2 65 0 2003 127 43 35 chr2 212343322 212343691 -38344163 - MER4E LTR ERV1 -63 716 345 6059 42 1 25 chr2 212343712 212344466 -38343388 - SVA Other Other 0 1386 651 1288 155 54 24 chr2 212344649 212344985 -38342869 - SVA Other Other -588 798 453 1454 82 0 10 chr2 212344994 212345200 -38342654 - MER4B LTR ERV1 -406 204 1 2070 147 0 3 chr2 212346546 212346853 -38341001 - AluJb SINE Alu -6 306 1 256 202 22 45 chr2 212347042 212347131 -38340723 - MER34 LTR ERV1 -6 536 450 313 267 9 19 chr2 212347686 212347791 -38340063 - MLT1K LTR MaLR -7 581 478 406 316 99 6 chr2 212347954 212348125 -38339729 - MLT1K LTR MaLR -369 219 33 1915 224 31 27 chr2 212348406 212349042 -38338812 - L1MC4a LINE L1 -200 7608 6934 371 304 75 26 chr2 212349033 212349348 -38338506 - L1ME LINE L1 -500 5621 5287 * 324 302 11 71 chr2 212349418 212349600 -38338254 - L1ME LINE L1 -1015 5131 4961 23 68 0 0 chr2 212350070 212350114 -38337740 + AT_rich Low_complexity Low_complexity 1 44 0 1741 178 4 4 chr2 212350169 212350444 -38337410 - AluJo SINE Alu -37 275 1 857 171 58 90 chr2 212351064 212351374 -38336480 - L1MC3 LINE L1 -27 7758 7459 270 317 104 61 chr2 212351401 212351565 -38336289 + L2 LINE L2 3102 3272 0 641 249 102 100 chr2 212351912 212352373 -38335481 - L1MC4a LINE L1 -1862 5946 5485 525 238 24 48 chr2 212352378 212352546 -38335308 - MIR SINE MIR 0 262 99 22 70 0 0 chr2 212359862 212359905 -38327949 + AT_rich Low_complexity Low_complexity 1 43 0 237 321 164 18 chr2 212360135 212360300 -38327554 - L3b LINE CR1 -59 1524 1336 2179 122 0 3 chr2 212360553 212360864 -38326990 - AluSg SINE Alu 0 310 1 22 0 0 0 chr2 212361945 212361967 -38325887 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 212362445 212362476 -38325378 + AT_rich Low_complexity Low_complexity 1 31 0 2390 93 3 0 chr2 212363052 212363354 -38324500 - AluSx SINE Alu -9 303 1 266 115 58 0 chr2 212363525 212363577 -38324277 + MER41-int LTR ERV1 1 55 -5891 469 81 0 92 chr2 212363674 212363761 -38324093 - MADE1 DNA Mariner -1 79 1 7166 53 0 4 chr2 212364330 212365356 -38322498 - L1PA6 LINE L1 -2 6152 5128 22116 61 5 1 chr2 212368199 212371229 -38316625 - L1PA6 LINE L1 -1003 5143 2101 367 156 0 42 chr2 212371335 212371431 -38316423 + (TATATG)n Simple_repeat Simple_repeat 3 94 0 251 219 0 62 chr2 212371438 212371534 -38316320 + L1MC4 LINE L1 6614 6703 -1339 418 200 36 0 chr2 212371534 212371644 -38316210 + (TATATG)n Simple_repeat Simple_repeat 4 117 0 1492 116 40 29 chr2 212371644 212371919 -38315935 + L1MA7 LINE L1 5776 6053 -238 562 186 0 0 chr2 212371923 212372025 -38315829 + L1 LINE L1 4118 4219 -1927 1065 224 4 4 chr2 212372032 212372273 -38315581 - MER96B DNA MER1_type? -175 242 2 981 294 84 19 chr2 212372397 212372765 -38315089 + L2 LINE L2 2921 3312 -1 325 138 52 0 chr2 212373228 212373286 -38314568 - L1 LINE L1 -2198 3948 3888 2221 211 14 18 chr2 212373648 212374146 -38313708 - LTR31 LTR ERV1 -15 604 109 213 226 0 19 chr2 212374229 212374282 -38313572 - MIR3 SINE MIR -36 172 121 1013 167 0 6 chr2 212375292 212375448 -38312406 - FAM SINE Alu -18 167 13 411 304 74 14 chr2 212375450 212375598 -38312256 - MIR SINE MIR 0 262 106 1831 155 7 0 chr2 212375608 212375886 -38311968 + AluSx SINE Alu 1 280 -32 275 313 20 30 chr2 212375929 212376028 -38311826 - MIR SINE MIR -160 102 5 401 301 15 29 chr2 212376289 212376425 -38311429 - MIR SINE MIR -123 139 6 1556 115 0 5 chr2 212376656 212376864 -38310990 + AluSx SINE Alu 1 207 -105 403 39 0 0 chr2 212376868 212376919 -38310935 + AluSx SINE Alu 247 297 -15 1475 196 79 0 chr2 212377003 212377269 -38310585 + AluJb SINE Alu 1 287 -25 548 194 5 38 chr2 212377298 212377484 -38310370 + GA-rich Low_complexity Low_complexity 1 180 0 970 34 54 0 chr2 212377487 212377635 -38310219 + (GAAA)n Simple_repeat Simple_repeat 2 157 0 2158 127 3 0 chr2 212377654 212377953 -38309901 - AluSx SINE Alu -12 300 1 341 336 65 8 chr2 212377959 212378221 -38309633 + L1MC/D LINE L1 5438 5714 -2094 305 270 37 6 chr2 212378361 212378524 -38309330 + Charlie7 DNA MER1_type 2417 2584 -28 938 134 7 0 chr2 212378724 212378873 -38308981 + LTR40c LTR ERVL 21 170 -295 317 188 68 120 chr2 212379308 212379426 -38308428 + MER34 LTR ERV1 450 542 0 510 254 0 35 chr2 212379426 212379568 -38308286 + LTR40a LTR ERVL 367 503 -16 2880 157 61 9 chr2 212379884 212380444 -38307410 - MER4D LTR ERV1 0 903 315 270 58 96 0 chr2 212380444 212380496 -38307358 + AluSc SINE Alu 240 296 -3 1495 99 28 95 chr2 212380615 212381151 -38306703 - SVA Other Other -457 929 430 1323 92 12 59 chr2 212381164 212381502 -38306352 - SVA Other Other -520 866 545 5158 62 63 46 chr2 212381516 212382342 -38305512 - SVA Other Other -520 866 27 1099 102 0 0 chr2 212382342 212382479 -38305375 - AluSq/x SINE Alu -176 137 1 277 246 34 119 chr2 212382495 212382613 -38305241 - MIR SINE MIR -150 112 5 2448 144 21 0 chr2 212382665 212383088 -38304766 - L1MA5 LINE L1 -349 5951 5520 * 4005 241 148 9 chr2 212383087 212384483 -38303371 + L1P LINE L1 3505 5094 -1052 309 89 0 0 chr2 212384758 212384803 -38303051 + (TC)n Simple_repeat Simple_repeat 2 46 0 550 212 22 106 chr2 212385494 212385611 -38302243 + MER5B DNA MER1_type 13 113 -65 2247 99 0 0 chr2 212385611 212385944 -38301910 - AluSx SINE Alu 0 333 1 550 212 22 106 chr2 212385944 212386004 -38301850 + MER5B DNA MER1_type 113 176 -2 374 182 78 0 chr2 212386122 212386199 -38301655 + MER82 DNA MER2_type 3 85 -568 348 280 74 32 chr2 212386262 212386451 -38301403 - MIR SINE MIR -57 205 9 733 201 65 38 chr2 212386489 212386673 -38301181 + MER82 DNA MER2_type 445 633 -20 456 310 46 29 chr2 212386878 212387052 -38300802 + MER5A DNA MER1_type 7 183 -6 361 331 41 7 chr2 212387074 212387219 -38300635 + HAL1 LINE L1 1613 1762 -745 221 238 0 38 chr2 212387279 212387359 -38300495 + A-rich Low_complexity Low_complexity 2 78 0 1001 139 16 107 chr2 212387361 212387605 -38300249 + MER4D LTR ERV1 1 222 -681 1543 68 14 23 chr2 212387706 212387925 -38299929 + AluY SINE Alu 91 307 -4 448 281 30 0 chr2 212388114 212388249 -38299605 - MIR SINE MIR -10 252 114 831 176 59 5 chr2 212388260 212388464 -38299390 - L1MB8 LINE L1 -164 6014 5800 598 242 145 5 chr2 212388908 212389144 -38298710 - L1MC4 LINE L1 -95 7713 7457 212 293 73 0 chr2 212389437 212389519 -38298335 - L2 LINE L2 -2 3270 3183 2895 190 31 90 chr2 212391334 212392068 -38295786 + L1M4 LINE L1 497 1272 -5270 1228 212 137 4 chr2 212392068 212392323 -38295531 + AluSx SINE Alu 1 289 -23 2895 190 31 90 chr2 212392323 212392446 -38295408 + L1M4 LINE L1 1272 1303 -5239 7671 20 4 1 chr2 212392446 212393765 -38294089 + L1PA3 LINE L1 4834 6155 0 2895 190 31 90 chr2 212393765 212393795 -38294059 + L1M4 LINE L1 1303 1333 -5209 21 36 0 0 chr2 212393796 212393824 -38294030 + AT_rich Low_complexity Low_complexity 1 28 0 236 311 107 40 chr2 212393928 212394053 -38293801 + L2 LINE L2 3117 3259 -54 1876 127 98 17 chr2 212394053 212394400 -38293454 - THE1C LTR MaLR 0 375 1 236 311 107 40 chr2 212394400 212394451 -38293403 + L2 LINE L2 3259 3305 -8 5082 127 47 16 chr2 212394493 212395100 -38292754 - Tigger3b DNA MER2_type -2062 966 318 2259 121 0 0 chr2 212395100 212395406 -38292448 + AluSx SINE Alu 1 306 -6 5082 127 47 16 chr2 212395406 212395735 -38292119 - Tigger3b DNA MER2_type -2710 318 1 1943 207 119 12 chr2 212396005 212396507 -38291347 + REP3 LTR ERV 3 558 -4 27 73 0 0 chr2 212396796 212396851 -38291003 + AT_rich Low_complexity Low_complexity 1 55 0 1343 167 90 10 chr2 212396878 212397195 -38290659 + L1MB7 LINE L1 5818 6161 -23 676 213 102 33 chr2 212397233 212397477 -38290377 - MLT1C LTR MaLR 0 467 207 249 33 0 0 chr2 212397477 212397507 -38290347 + (TG)n Simple_repeat Simple_repeat 2 31 0 220 298 12 12 chr2 212398133 212398217 -38289637 + (CATATA)n Simple_repeat Simple_repeat 6 89 0 4650 147 9 29 chr2 212398226 212398394 -38289460 - L1M2 LINE L1 -546 5766 5596 2041 118 27 7 chr2 212398394 212398691 -38289163 - AluSx SINE Alu -9 303 1 4650 147 9 29 chr2 212398691 212399849 -38288005 - L1M2 LINE L1 -716 5596 4467 2090 162 74 11 chr2 212399847 212400530 -38287324 - L1M4 LINE L1 -3639 2743 2019 * 203 253 0 66 chr2 212400531 212400713 -38287141 + (TTATA)n Simple_repeat Simple_repeat 1 170 0 238 262 5 63 chr2 212400721 212400912 -38286942 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 10784 142 19 22 chr2 212400929 212402921 -38284933 - L1M4 LINE L1 -4384 2000 15 2243 91 0 10 chr2 212402941 212403237 -38284617 + AluY SINE Alu 1 293 -18 563 223 74 0 chr2 212403265 212403386 -38284468 + FLAM_A SINE Alu 7 136 -6 2016 156 0 13 chr2 212403403 212403717 -38284137 + AluSx SINE Alu 1 310 -2 635 202 65 0 chr2 212403771 212403895 -38283959 - FLAM_C SINE Alu 0 133 2 232 227 0 0 chr2 212406168 212406212 -38281642 + L1ME2 LINE L1 35 78 -6318 3035 258 73 23 chr2 212406227 212407495 -38280359 + L1ME2 LINE L1 296 1627 -4769 2228 210 94 9 chr2 212407510 212408043 -38279811 + L1MB8 LINE L1 5599 6176 -2 2050 201 112 47 chr2 212408048 212408229 -38279625 + L1ME2 LINE L1 1631 1799 -4597 1906 164 0 13 chr2 212408229 212408533 -38279321 - AluJb SINE Alu -12 300 1 2050 201 112 47 chr2 212408533 212408555 -38279299 + L1ME2 LINE L1 1799 1818 -4578 2309 105 3 13 chr2 212408555 212408869 -38278985 - AluSp SINE Alu -2 311 1 2050 201 112 47 chr2 212408869 212409315 -38278539 + L1ME2 LINE L1 1818 2333 -4063 2109 173 29 12 chr2 212409315 212409657 -38278197 - MER7A DNA MER2_type 0 346 1 2050 201 112 47 chr2 212409657 212409708 -38278146 + L1ME2 LINE L1 2333 2379 -4017 631 265 68 11 chr2 212409708 212410019 -38277835 + MLT2F LTR ERVL 1 374 -289 6612 234 63 34 chr2 212410022 212411808 -38276046 + L1ME2 LINE L1 3139 4872 -1361 2058 141 0 3 chr2 212411808 212412106 -38275748 + AluJb SINE Alu 5 301 -11 6612 234 63 34 chr2 212412106 212412880 -38274974 + L1ME2 LINE L1 4872 5800 -433 2159 116 7 0 chr2 212412880 212413181 -38274673 + AluSq SINE Alu 1 303 -10 6612 234 63 34 chr2 212413181 212413482 -38274372 + L1ME2 LINE L1 5800 6091 -142 711 198 31 6 chr2 212413490 212413652 -38274202 + L1MA10 LINE L1 6169 6334 0 3417 220 83 19 chr2 212413770 212414624 -38273230 + L1MC4 LINE L1 6489 7397 -645 1689 193 38 33 chr2 212414625 212414689 -38273165 - LTR52 LTR ERVL -15 406 344 321 26 0 0 chr2 212414689 212414727 -38273127 + (CA)n Simple_repeat Simple_repeat 2 39 0 1689 193 38 33 chr2 212414727 212415056 -38272798 - LTR52 LTR ERVL -77 344 11 684 222 53 37 chr2 212415057 212415177 -38272677 + L1MC4 LINE L1 7393 7519 -523 3264 171 35 0 chr2 212415177 212415720 -38272134 + MER68 LTR ERV1 1 562 0 684 222 53 37 chr2 212415720 212415788 -38272066 + L1MC4 LINE L1 7519 7584 -458 270 284 54 0 chr2 212415814 212415888 -38271966 + L1MC4 LINE L1 7665 7742 -300 * 340 282 0 0 chr2 212415882 212415960 -38271894 + L1MC4a LINE L1 7730 7807 -1 1670 175 10 26 chr2 212415966 212416275 -38271579 - AluJo SINE Alu -8 304 1 237 246 29 29 chr2 212416298 212416367 -38271487 - L1ME LINE L1 -288 5833 5765 594 307 11 23 chr2 212416368 212416544 -38271310 - MER5B DNA MER1_type -1 177 4 374 259 176 18 chr2 212416568 212416738 -38271116 - L1ME LINE L1 -352 5769 5573 225 250 73 0 chr2 212416977 212417073 -38270781 - L1ME LINE L1 -886 5260 5158 218 31 0 31 chr2 212418447 212418479 -38269375 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 879 243 78 4 chr2 212418682 212418925 -38268929 + MIR SINE MIR 2 262 0 369 169 0 0 chr2 212418968 212419027 -38268827 + AluJ/FRAM SINE Alu 221 279 -23 2462 103 47 36 chr2 212419063 212419423 -38268431 + THE1B LTR MaLR 1 364 0 3000 61 33 23 chr2 212419434 212419570 -38268284 + THE1-int LTR MaLR 1142 1275 -305 1801 144 3 14 chr2 212419570 212419878 -38267976 + AluSx SINE Alu 1 305 0 3000 61 33 23 chr2 212419878 212420136 -38267718 + THE1-int LTR MaLR 1275 1541 -39 1229 122 14 56 chr2 212420136 212420349 -38267505 + THE1B LTR MaLR 161 364 0 264 230 101 90 chr2 212420443 212420621 -38267233 - L1ME1 LINE L1 -177 5987 5805 742 285 117 44 chr2 212420639 212421220 -38266634 - L1ME1 LINE L1 -448 5722 5086 799 166 72 0 chr2 212421693 212421832 -38266022 + AluJb SINE Alu 131 279 -33 1074 32 0 0 chr2 212421931 212422054 -38265800 + L1PA4 LINE L1 6030 6152 -3 596 249 31 53 chr2 212424018 212424243 -38263611 - L2 LINE L2 0 3313 3094 1420 90 48 0 chr2 212424337 212424525 -38263329 + L1PA10 LINE L1 5971 6167 -1 2114 100 14 54 chr2 212424725 212425074 -38262780 + L1MA5 LINE L1 5961 6295 -5 2030 124 17 0 chr2 212425087 212425377 -38262477 + AluSx SINE Alu 1 295 -17 691 306 85 4 chr2 212425609 212425867 -38261987 - L1ME4a LINE L1 -218 5903 5625 1822 158 3 25 chr2 212425868 212426184 -38261670 + AluSx SINE Alu 1 309 -3 22 35 0 0 chr2 212426188 212426217 -38261637 + AT_rich Low_complexity Low_complexity 1 29 0 668 225 0 0 chr2 212426233 212426344 -38261510 + FLAM_A SINE Alu 5 115 -18 701 226 0 0 chr2 212426376 212426509 -38261345 - FLAM_A SINE Alu 0 133 1 2149 102 3 7 chr2 212426750 212427074 -38260780 + AluSq SINE Alu 2 324 0 210 190 13 38 chr2 212427759 212427838 -38260016 + GA-rich Low_complexity Low_complexity 2 78 0 829 241 0 13 chr2 212428420 212428578 -38259276 - AluJo SINE Alu -30 282 127 308 186 0 14 chr2 212428681 212428751 -38259103 + GA-rich Low_complexity Low_complexity 4 72 0 383 0 21 0 chr2 212428772 212428819 -38259035 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 2600 186 92 31 chr2 212428819 212429406 -38258448 + HERVL74 LTR ERVL 1050 1672 -4013 1986 145 58 14 chr2 212429406 212429765 -38258089 + THE1C LTR MaLR 1 375 0 9244 123 31 57 chr2 212429768 212429875 -38257979 + THE1C-int LTR MaLR 4 112 -1468 1264 131 0 6 chr2 212429875 212430058 -38257796 + L1PA11 LINE L1 5992 6173 -1 9244 123 31 57 chr2 212430058 212431570 -38256284 + THE1C-int LTR MaLR 112 1580 0 1913 169 55 17 chr2 212431570 212431931 -38255923 + THE1C LTR MaLR 1 375 0 5969 191 14 22 chr2 212431931 212433542 -38254312 + HERVL74 LTR ERVL 1668 3340 -2345 2152 130 3 3 chr2 212433545 212433853 -38254001 - AluSx SINE Alu -4 308 1 823 199 18 18 chr2 212433854 212434025 -38253829 + HERVL74 LTR ERVL 3488 3658 -2027 * 940 148 32 0 chr2 212434011 212434166 -38253688 + HERVL74 LTR ERVL 3914 4073 -1612 2314 118 0 0 chr2 212434583 212434888 -38252966 - AluSx SINE Alu -7 305 1 480 113 28 0 chr2 212434888 212434959 -38252895 + MER41B LTR ERV1 563 635 0 1734 162 16 0 chr2 212434959 212435267 -38252587 - MSTB-int LTR MaLR -1338 313 1 2644 147 57 5 chr2 212435270 212435671 -38252183 - MSTB LTR MaLR -4 422 1 2524 167 50 13 chr2 212436071 212436533 -38251321 + MER54A LTR ERVL 18 496 -405 1015 157 79 0 chr2 212436669 212436847 -38251007 - LTR47A LTR ERVL 0 452 261 1132 175 116 71 chr2 212437187 212437455 -38250399 + AluJo SINE Alu 12 291 -21 2189 129 0 3 chr2 212437853 212438156 -38249698 + AluSx SINE Alu 1 302 -10 894 243 47 30 chr2 212439396 212439692 -38248162 + L1ME3A LINE L1 5806 6106 -64 189 121 0 0 chr2 212439714 212439747 -38248107 + (TC)n Simple_repeat Simple_repeat 1 33 0 1881 144 0 7 chr2 212439752 212440029 -38247825 - AluJb SINE Alu -24 288 14 4380 185 46 38 chr2 212440085 212441591 -38246263 + L1MB3 LINE L1 4623 6143 -40 1719 160 29 21 chr2 212441591 212441872 -38245982 - AluJb SINE Alu -29 283 1 4380 185 46 38 chr2 212441872 212441903 -38245951 + L1MB3 LINE L1 6143 6172 -11 224 310 26 44 chr2 212442002 212442115 -38245739 + MER5A DNA MER1_type 18 128 -61 * 318 299 66 36 chr2 212442023 212442160 -38245694 - MER5B DNA MER1_type -28 150 10 25 83 0 0 chr2 212442371 212442431 -38245423 + AT_rich Low_complexity Low_complexity 1 60 0 626 241 237 15 chr2 212442889 212443163 -38244691 + LTR16A LTR ERVL 116 450 0 422 221 168 0 chr2 212443485 212443580 -38244274 - MER81 DNA DNA -3 111 1 540 306 44 5 chr2 212443715 212443921 -38243933 + L2 LINE L2 3100 3313 0 2198 107 3 0 chr2 212444633 212444924 -38242930 + AluSg SINE Alu 2 293 -17 204 67 0 0 chr2 212444925 212444955 -38242899 + (TA)n Simple_repeat Simple_repeat 1 30 0 6797 194 20 32 chr2 212445495 212446434 -38241420 + Charlie1a DNA MER1_type 1 917 -1844 2342 105 0 0 chr2 212446434 212446738 -38241116 + AluSx SINE Alu 1 304 -8 6797 194 20 32 chr2 212446738 212447266 -38240588 + Charlie1a DNA MER1_type 917 1450 -5 285 226 48 0 chr2 212447292 212447354 -38240500 + MLT1K LTR MaLR 524 588 0 3573 158 33 23 chr2 212447575 212448176 -38239678 + LTR31 LTR ERV1 3 609 -10 1937 182 34 30 chr2 212448322 212448511 -38239343 + L1MB7 LINE L1 5729 5916 -268 2184 129 3 0 chr2 212448511 212448814 -38239040 - AluSx SINE Alu -7 305 2 1937 182 34 30 chr2 212448814 212449057 -38238797 + L1MB7 LINE L1 5916 6161 -23 22 35 0 0 chr2 212449061 212449090 -38238764 + AT_rich Low_complexity Low_complexity 1 29 0 1025 185 120 74 chr2 212449095 212449338 -38238516 - MLT1C LTR MaLR 0 467 237 333 118 0 0 chr2 212449338 212449389 -38238465 + (TG)n Simple_repeat Simple_repeat 2 52 0 1025 185 120 74 chr2 212449389 212449407 -38238447 - MLT1C LTR MaLR -230 237 221 2542 61 0 0 chr2 212449407 212449718 -38238136 - AluY SINE Alu 0 311 1 1025 185 120 74 chr2 212449718 212449890 -38237964 - MLT1C LTR MaLR -246 221 1 1999 87 16 0 chr2 212449974 212450228 -38237626 + L1PA8 LINE L1 5915 6172 0 264 312 98 42 chr2 212450281 212450620 -38237234 + LTR16B LTR ERVL 58 458 -6 3522 278 98 29 chr2 212450626 212451588 -38236266 + HERV16 LTR ERVL 2 1083 -3913 1943 106 91 4 chr2 212451588 212451862 -38235992 - AluSx SINE Alu -14 298 1 3522 278 98 29 chr2 212451862 212452233 -38235621 + HERV16 LTR ERVL 1083 1427 -3569 2110 135 3 0 chr2 212452885 212453182 -38234672 + AluSx SINE Alu 1 298 -14 1300 312 28 19 chr2 212453222 212453701 -38234153 + HERVL LTR ERVL 4133 4555 -1099 718 288 16 54 chr2 212453887 212454203 -38233651 + LTR16B LTR ERVL 160 463 -1 571 235 33 20 chr2 212454369 212454522 -38233332 - L2 LINE L2 0 3313 3159 1868 159 0 3 chr2 212454533 212454835 -38233019 + AluJo SINE Alu 1 301 -11 13497 128 13 17 chr2 212455133 212457227 -38230627 - L1P LINE L1 -4048 2098 12 1921 124 3 55 chr2 212457240 212457547 -38230307 - AluSx SINE Alu -21 291 1 238 353 47 0 chr2 212457588 212457673 -38230181 - L2 LINE L2 -16 3256 3168 735 272 98 81 chr2 212458488 212458731 -38229123 - MLT1F LTR MaLR 0 542 305 3436 55 12 0 chr2 212458731 212459146 -38228708 - L1PA4 LINE L1 0 6155 5736 735 272 98 81 chr2 212459146 212459435 -38228419 - MLT1F LTR MaLR -237 305 1 625 268 73 85 chr2 212459435 212459789 -38228065 - MLT1F-int LTR MaLR 0 1371 1022 316 369 0 0 chr2 212460486 212460654 -38227200 + (CCA)n Simple_repeat Simple_repeat 1 168 0 259 308 0 0 chr2 212461863 212461928 -38225926 - MLT1F-int LTR MaLR -1209 526 462 1311 195 106 3 chr2 212461949 212462241 -38225613 + MER2 DNA MER2_type 14 335 -10 232 339 61 12 chr2 212462267 212462432 -38225422 - MLT1F-int LTR MaLR -909 462 290 342 231 0 13 chr2 212462451 212462529 -38225325 - MLT1F-int LTR MaLR -1280 91 15 266 258 114 45 chr2 212462567 212462699 -38225155 - MLT1F LTR MaLR -34 515 375 2137 113 0 20 chr2 212462812 212463105 -38224749 - AluSx SINE Alu -21 291 5 352 260 49 30 chr2 212463124 212463338 -38224516 - MLT1F LTR MaLR -323 232 1 289 238 69 50 chr2 212463612 212463713 -38224141 + MIR SINE MIR 33 135 -73 191 328 0 0 chr2 212463751 212463818 -38224036 + L2 LINE L2 2984 3050 -263 1146 265 102 32 chr2 212464094 212464505 -38223349 - MLT1J2 LTR MaLR -10 440 1 308 267 125 23 chr2 212464679 212464855 -38222999 - L1ME4a LINE L1 -158 5963 5770 399 238 79 8 chr2 212465943 212466069 -38221785 - L1ME4a LINE L1 -11 6110 5976 272 147 16 171 chr2 212466198 212466259 -38221595 - L1ME4a LINE L1 -4 6117 6085 2274 99 10 6 chr2 212466259 212466571 -38221283 + AluSq SINE Alu 1 313 0 272 147 16 171 chr2 212466571 212466638 -38221216 - L1ME4a LINE L1 -36 6085 6009 239 239 107 9 chr2 212466934 212467043 -38220811 - L1ME4a LINE L1 -504 5617 5494 2125 105 0 14 chr2 212467211 212467507 -38220347 - AluSx SINE Alu -15 297 6 348 24 0 0 chr2 212467895 212467936 -38219918 + (CA)n Simple_repeat Simple_repeat 2 42 0 8014 37 0 23 chr2 212468094 212469103 -38218751 - L1PA5 LINE L1 -3 6151 5149 202 361 50 17 chr2 212469782 212469901 -38217953 + L3 LINE CR1 1282 1404 -173 875 270 38 44 chr2 212469952 212470270 -38217584 + MER102b DNA MER1_type 26 341 0 714 176 77 29 chr2 212472013 212472409 -38215445 + Charlie1 DNA MER1_type 2172 2632 -129 289 274 89 12 chr2 212472541 212472728 -38215126 - LTR16A LTR ERVL 0 450 221 449 174 17 43 chr2 212472763 212472878 -38214976 - MER53 DNA DNA -77 112 1 693 280 43 14 chr2 212472888 212473099 -38214755 - LTR16A LTR ERVL -233 217 1 455 43 0 57 chr2 212473530 212473600 -38214254 + AluSp/q SINE Alu 241 306 -7 208 257 54 0 chr2 212473998 212474072 -38213782 + MIR SINE MIR 183 260 -2 288 0 0 0 chr2 212474642 212474674 -38213180 + (TG)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr2 212475621 212475644 -38212210 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2044 124 0 11 chr2 212475647 212475930 -38211924 - AluSx SINE Alu -32 280 1 640 304 68 17 chr2 212476217 212476454 -38211400 + MIR SINE MIR 2 250 -12 23 0 0 0 chr2 212476483 212476506 -38211348 + AT_rich Low_complexity Low_complexity 1 23 0 520 269 23 40 chr2 212476983 212477158 -38210696 + MIR3 SINE MIR 32 203 -5 197 353 0 0 chr2 212477282 212477333 -38210521 + MIR SINE MIR 50 100 -162 286 326 11 11 chr2 212477342 212477431 -38210423 - MER5B DNA MER1_type 0 178 90 785 148 31 0 chr2 212477468 212477596 -38210258 + L1MA9 LINE L1 5420 5551 -761 403 96 0 68 chr2 212477596 212477653 -38210201 + MADE1 DNA Mariner 1 54 -26 2502 58 0 0 chr2 212477653 212477944 -38209910 - AluY SINE Alu -20 291 1 403 96 0 68 chr2 212477944 212477959 -38209895 + MADE1 DNA Mariner 54 68 -12 2922 156 77 97 chr2 212477983 212478049 -38209805 + L1MA9 LINE L1 5550 5616 -696 2457 82 3 0 chr2 212478049 212478353 -38209501 + AluSp SINE Alu 1 305 -8 2922 156 77 97 chr2 212478353 212478565 -38209289 + L1MA9 LINE L1 5616 5831 -481 364 247 0 0 chr2 212478565 212478658 -38209196 - L1MA4 LINE L1 0 6300 6208 2922 156 77 97 chr2 212478658 212479123 -38208731 + L1MA9 LINE L1 5831 6279 -33 221 217 65 0 chr2 212479124 212479170 -38208684 - MER5B DNA MER1_type -129 49 1 180 267 52 133 chr2 212479177 212479312 -38208542 + MIR SINE MIR 113 236 -26 316 120 43 11 chr2 212480574 212480666 -38207188 + (TA)n Simple_repeat Simple_repeat 2 96 0 333 0 0 0 chr2 212480666 212480703 -38207151 + (GA)n Simple_repeat Simple_repeat 2 38 0 545 174 22 0 chr2 212480771 212480863 -38206991 + MER58C DNA MER1_type 122 215 0 208 342 120 17 chr2 212481815 212481932 -38205922 - L2 LINE L2 -42 3230 3102 2411 87 0 31 chr2 212482325 212482647 -38205207 + AluSx SINE Alu 1 312 0 358 303 0 28 chr2 212483063 212483172 -38204682 - L2 LINE L2 -1 3271 3166 30 93 0 0 chr2 212484462 212484548 -38203306 + GC_rich Low_complexity Low_complexity 1 86 0 352 300 84 95 chr2 212484562 212485226 -38202628 + L1M2 LINE L1 445 1098 -5751 181 341 0 34 chr2 212487547 212487635 -38200219 - MIR SINE MIR -103 159 75 418 305 8 0 chr2 212489135 212489253 -38198601 + MER94 DNA DNA 1 119 -15 4156 172 82 17 chr2 212489439 212490248 -38197606 + MER21B LTR ERV1 1 861 -2 2146 98 30 7 chr2 212490508 212490803 -38197051 + AluSx SINE Alu 2 303 -9 577 285 89 62 chr2 212491851 212492255 -38195599 - L2 LINE L2 -5 3267 2853 1929 157 0 0 chr2 212492280 212492561 -38195293 - AluSx SINE Alu -31 281 1 310 308 34 34 chr2 212492630 212492747 -38195107 - MIR SINE MIR -123 139 23 734 213 0 7 chr2 212493547 212493683 -38194171 + AluJo SINE Alu 2 136 -176 2088 133 152 11 chr2 212495118 212495493 -38192361 - MSTA LTR MaLR 0 428 1 9582 148 32 34 chr2 212495493 212497075 -38190779 - MSTA-int LTR MaLR 0 1580 3 2277 128 133 13 chr2 212497077 212497459 -38190395 - MSTA LTR MaLR 0 428 1 629 160 109 25 chr2 212497473 212497592 -38190262 - MSTA LTR MaLR -237 138 10 278 254 0 105 chr2 212499131 212499245 -38188609 + MIR SINE MIR 32 133 -129 195 231 0 0 chr2 212499249 212499288 -38188566 + L2 LINE L2 3218 3256 -16 1329 238 85 37 chr2 212500634 212501126 -38186728 + L2 LINE L2 2257 2772 -542 2303 170 16 41 chr2 212501287 212502035 -38185819 - L1M3 LINE L1 -570 5613 4879 2159 120 7 0 chr2 212502073 212502382 -38185472 - AluSx SINE Alu -1 311 1 223 273 45 0 chr2 212502494 212502560 -38185294 + MIR3 SINE MIR 92 160 -48 267 242 250 0 chr2 212502567 212502687 -38185167 - MER5A DNA MER1_type -7 182 33 823 296 151 10 chr2 212503871 212504125 -38183729 - L2 LINE L2 -559 2755 2538 2275 184 112 7 chr2 212504125 212504582 -38183272 + MLT1D LTR MaLR 1 505 0 823 296 151 10 chr2 212504582 212504844 -38183010 - L2 LINE L2 -776 2538 2166 2341 97 7 0 chr2 212505314 212505623 -38182231 + AluSx SINE Alu 1 311 -1 1128 153 11 5 chr2 212505737 212505926 -38181928 + MER20 DNA MER1_type 30 219 0 1302 242 24 3 chr2 212506063 212506361 -38181493 - AluJo SINE Alu -8 304 1 1602 174 59 163 chr2 212507692 212508164 -38179690 - MSTA LTR MaLR 0 426 4 8060 171 43 8 chr2 212508172 212509763 -38178091 - MSTA-int LTR MaLR -6 1645 1 2331 123 53 24 chr2 212509763 212510179 -38177675 - MSTA LTR MaLR 0 428 1 2194 265 46 42 chr2 212510200 212511148 -38176706 + L2 LINE L2 2282 3228 -85 2068 139 7 10 chr2 212513349 212513650 -38174204 + AluSx SINE Alu 1 300 -12 685 167 8 25 chr2 212514474 212514644 -38173210 + FLAM_C SINE Alu 2 169 0 1803 169 6 22 chr2 212514746 212515059 -38172795 + AluJb SINE Alu 1 308 -4 1948 152 3 0 chr2 212515607 212515896 -38171958 - AluJo SINE Alu -22 290 1 183 230 69 46 chr2 212515901 212515988 -38171866 - MIR SINE MIR -57 205 117 269 198 18 153 chr2 212516073 212516184 -38171670 + MIR SINE MIR 84 179 -83 2326 130 6 9 chr2 212517379 212517717 -38170137 + MER1B DNA MER1_type 1 337 0 225 0 0 0 chr2 212518919 212518944 -38168910 + (TA)n Simple_repeat Simple_repeat 1 25 0 335 23 23 0 chr2 212519521 212519565 -38168289 + (ATG)n Simple_repeat Simple_repeat 1 45 0 21 0 0 0 chr2 212519764 212519785 -38168069 + AT_rich Low_complexity Low_complexity 1 21 0 197 403 91 21 chr2 212519811 212520052 -38167802 + L2 LINE L2 2928 3185 -87 270 56 0 0 chr2 212520694 212520730 -38167124 + (TC)n Simple_repeat Simple_repeat 1 36 0 226 295 21 109 chr2 212523693 212523886 -38163968 - L2 LINE L2 -91 3181 3006 740 315 83 58 chr2 212524204 212525259 -38162595 - L2 LINE L2 -813 2501 1420 28 29 0 0 chr2 212525441 212525476 -38162378 + AT_rich Low_complexity Low_complexity 1 35 0 2654 111 0 3 chr2 212525755 212526117 -38161737 + THE1B LTR MaLR 1 361 -3 562 313 101 33 chr2 212526655 212527197 -38160657 - L2 LINE L2 0 3272 2701 279 175 0 0 chr2 212527690 212527747 -38160107 + CT-rich Low_complexity Low_complexity 1 57 0 1458 155 71 10 chr2 212527760 212528056 -38159798 - L1MB7 LINE L1 -32 6152 5839 206 295 98 27 chr2 212528177 212528289 -38159565 - L2 LINE L2 -11 3302 3183 293 288 54 36 chr2 212529205 212529316 -38158538 - L2 LINE L2 -1 3312 3200 574 219 62 7 chr2 212529446 212529677 -38158177 - LTR16C LTR ERVL 0 491 173 326 240 39 78 chr2 212530583 212530737 -38157117 - MIR SINE MIR -20 242 95 1971 153 31 36 chr2 212530971 212531363 -38156491 + MLT1B LTR MaLR 1 390 0 369 264 146 113 chr2 212533010 212533381 -38154473 - L2 LINE L2 -5 3267 2885 997 182 61 141 chr2 212533478 212533869 -38153985 - MLT1A1 LTR MaLR -5 360 1 22 0 0 0 chr2 212534211 212534233 -38153621 + AT_rich Low_complexity Low_complexity 1 22 0 2408 86 3 0 chr2 212534390 212534693 -38153161 - AluSq SINE Alu -9 304 1 1434 164 17 7 chr2 212534988 212535280 -38152574 - L1MA9 LINE L1 -6 6306 6012 32064 32 4 0 chr2 212535839 212540674 -38147180 + L1PA4 LINE L1 1307 6155 0 22 0 0 0 chr2 212540674 212540696 -38147158 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 212541057 212541080 -38146774 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 212541869 212541890 -38145964 + AT_rich Low_complexity Low_complexity 1 21 0 224 379 170 8 chr2 212542195 212542430 -38145424 - L3 LINE CR1 -6 1571 1299 264 257 54 0 chr2 212544419 212544493 -38143361 + L2 LINE L2 3236 3313 0 202 246 131 57 chr2 212545708 212545830 -38142024 - MIR SINE MIR -55 153 23 484 226 44 44 chr2 212546319 212546398 -38141456 - MIR SINE MIR -30 232 151 2097 126 139 16 chr2 212546398 212546779 -38141075 - MSTA LTR MaLR 0 428 1 484 226 44 44 chr2 212546779 212546836 -38141018 - MIR SINE MIR -110 152 96 2779 116 9 14 chr2 212548227 212548657 -38139197 + MSTA LTR MaLR 1 428 0 2401 62 10 0 chr2 212549059 212549347 -38138507 - AluY SINE Alu -20 291 1 2230 113 3 0 chr2 212549395 212549704 -38138150 + AluSx SINE Alu 1 310 -2 296 200 118 15 chr2 212550211 212550346 -38137508 - HAL1b LINE L1 -18 1330 1182 33 66 0 0 chr2 212550382 212550443 -38137411 + AT_rich Low_complexity Low_complexity 1 61 0 2319 107 0 0 chr2 212550462 212550770 -38137084 - AluSx SINE Alu -4 308 1 264 323 13 26 chr2 212550920 212551075 -38136779 - MER117 DNA MER1_type -34 163 11 270 202 76 50 chr2 212551248 212551367 -38136487 - HAL1b LINE L1 -262 1086 965 651 246 150 52 chr2 212551441 212552042 -38135812 - HAL1b LINE L1 -515 833 174 14713 115 40 13 chr2 212553733 212556089 -38131765 + Tigger1 DNA MER2_type 1 2418 0 21 0 0 0 chr2 212556333 212556354 -38131500 + AT_rich Low_complexity Low_complexity 1 21 0 263 244 30 96 chr2 212557089 212557224 -38130630 - L1ME3A LINE L1 -77 6093 5968 23 0 0 0 chr2 212557246 212557269 -38130585 + AT_rich Low_complexity Low_complexity 1 23 0 1593 198 56 31 chr2 212557407 212557765 -38130089 - MLT1A2 LTR MaLR 0 374 8 210 169 17 34 chr2 212558017 212558076 -38129778 + A-rich Low_complexity Low_complexity 3 60 0 226 211 70 42 chr2 212558474 212558545 -38129309 - L2 LINE L2 -5 3267 3195 1523 207 0 10 chr2 212560751 212561056 -38126798 + AluJb SINE Alu 1 302 -10 251 276 72 28 chr2 212562496 212562677 -38125177 - L1ME4a LINE L1 -15 6106 5918 400 247 247 35 chr2 212562791 212563018 -38124836 - L1ME4a LINE L1 -454 5667 5393 299 182 13 0 chr2 212563131 212563208 -38124646 + (TA)n Simple_repeat Simple_repeat 1 78 0 375 216 20 95 chr2 212563239 212563423 -38124431 - L1ME4a LINE L1 -1751 4395 4226 2234 111 39 33 chr2 212565506 212565868 -38121986 - THE1B LTR MaLR 0 364 1 694 166 7 58 chr2 212566036 212566175 -38121679 - MER94 DNA DNA 0 134 3 196 253 89 13 chr2 212566341 212566420 -38121434 - MIR3 SINE MIR -3 205 121 207 0 0 0 chr2 212566597 212566620 -38121234 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2213 114 0 0 chr2 212566622 212566911 -38120943 - AluSg SINE Alu -21 289 1 438 36 0 0 chr2 212567163 212567219 -38120635 + (CA)n Simple_repeat Simple_repeat 2 57 0 447 288 35 38 chr2 212567548 212567789 -38120065 - MLT1J2 LTR MaLR -172 237 1 371 295 0 0 chr2 212568684 212568762 -38119092 - L2 LINE L2 -1 3271 3194 203 312 32 32 chr2 212569754 212569847 -38118007 - MIR3 SINE MIR -1 207 115 366 169 24 24 chr2 212569905 212569988 -38117866 + MIR SINE MIR 180 262 0 22 0 0 0 chr2 212570398 212570420 -38117434 + AT_rich Low_complexity Low_complexity 1 22 0 1759 155 20 10 chr2 212570420 212570717 -38117137 - AluJo SINE Alu -12 300 1 1441 186 33 99 chr2 212570737 212570841 -38117013 + MER58B DNA MER1_type 1 110 -2310 2211 93 3 3 chr2 212570841 212571130 -38116724 - AluSc SINE Alu -20 289 1 1441 186 33 99 chr2 212571130 212571390 -38116464 + MER58B DNA MER1_type 110 341 0 814 50 0 0 chr2 212571560 212571660 -38116194 + AluY SINE Alu 205 304 -7 198 0 0 0 chr2 212571691 212571713 -38116141 + (T)n Simple_repeat Simple_repeat 1 22 0 399 284 29 10 chr2 212572397 212572499 -38115355 - MIR SINE MIR -74 188 85 533 315 56 19 chr2 212573611 212574039 -38113815 - L1ME4a LINE L1 -145 5976 5533 21 0 0 0 chr2 212574043 212574064 -38113790 + AT_rich Low_complexity Low_complexity 1 21 0 2290 95 7 10 chr2 212574218 212574524 -38113330 - AluSq SINE Alu -8 305 1 1111 194 100 32 chr2 212575037 212575316 -38112538 - L1MB8 LINE L1 -2 6176 5879 833 152 2 155 chr2 212575324 212575576 -38112278 - L1MA9 LINE L1 -5 6307 6099 3755 172 7 19 chr2 212576277 212577010 -38110844 + L1MB7 LINE L1 5444 6167 -17 412 149 46 35 chr2 212577148 212577235 -38110619 - L1MA9 LINE L1 -308 5881 5794 207 69 0 0 chr2 212577235 212577264 -38110590 + (TG)n Simple_repeat Simple_repeat 2 30 0 1333 186 69 58 chr2 212577264 212577342 -38110512 + L1MA9 LINE L1 5877 5953 -359 552 90 0 0 chr2 212577342 212577420 -38110434 - MADE1 DNA Mariner 0 80 3 1333 186 69 58 chr2 212577420 212577734 -38110120 + L1MA9 LINE L1 5953 6273 -39 2267 110 0 0 chr2 212577735 212578027 -38109827 - AluSx SINE Alu -20 292 1 351 247 0 14 chr2 212578110 212578183 -38109671 - L2 LINE L2 -49 3264 3193 26 0 0 0 chr2 212579222 212579248 -38108606 + AT_rich Low_complexity Low_complexity 1 26 0 252 86 0 0 chr2 212579774 212579809 -38108045 + (TTA)n Simple_repeat Simple_repeat 2 36 0 765 154 0 24 chr2 212579809 212579932 -38107922 - FLAM_C SINE Alu -20 123 4 1043 146 0 19 chr2 212581038 212581196 -38106658 + AluSg/x SINE Alu 119 273 -37 180 0 0 0 chr2 212581204 212581224 -38106630 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 477 0 0 0 chr2 212581238 212581291 -38106563 + (CA)n Simple_repeat Simple_repeat 2 54 0 1077 179 73 6 chr2 212581298 212581477 -38106377 - MER8 DNA MER2_type -25 214 24 21 0 0 0 chr2 212581914 212581935 -38105919 + AT_rich Low_complexity Low_complexity 1 21 0 248 167 24 24 chr2 212581935 212582019 -38105835 + (TTA)n Simple_repeat Simple_repeat 2 85 0 890 131 0 0 chr2 212582079 212582209 -38105645 + AluSg/x SINE Alu 173 302 -8 342 230 148 15 chr2 212582264 212582399 -38105455 + HAL1 LINE L1 2058 2210 -297 519 243 62 48 chr2 212582425 212582635 -38105219 + HAL1 LINE L1 2281 2493 -14 247 346 11 34 chr2 212583217 212583396 -38104458 - L2 LINE L2 -17 3296 3122 3291 91 40 0 chr2 212584649 212584772 -38103082 + L1PB1 LINE L1 5660 5777 -374 228 67 0 0 chr2 212584772 212584802 -38103052 + (CA)n Simple_repeat Simple_repeat 2 31 0 3291 91 40 0 chr2 212584802 212585151 -38102703 + L1PB1 LINE L1 5777 6151 0 1007 304 77 31 chr2 212585410 212585635 -38102219 - L2 LINE L2 -3 3310 3097 1759 65 9 0 chr2 212585635 212585851 -38102003 - AluY SINE Alu -11 300 83 1007 304 77 31 chr2 212585851 212586105 -38101749 - L2 LINE L2 -216 3097 2809 2103 114 0 0 chr2 212586227 212586507 -38101347 + AluSg SINE Alu 1 280 -30 186 71 0 0 chr2 212586507 212586535 -38101319 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 294 256 155 0 chr2 212587529 212587658 -38100196 - L1ME4a LINE L1 -3 6118 5970 414 279 93 0 chr2 212587733 212587862 -38099992 + MIR SINE MIR 107 247 -15 350 336 16 0 chr2 212587898 212588023 -38099831 - L1ME4a LINE L1 -476 5645 5519 30 0 0 0 chr2 212590282 212590312 -38097542 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 212591375 212591396 -38096458 + AT_rich Low_complexity Low_complexity 1 21 0 2632 30 0 0 chr2 212591621 212591921 -38095933 - AluY SINE Alu -10 301 2 856 198 118 0 chr2 212592174 212592361 -38095493 + MER63A DNA MER1_type 2 210 0 1496 210 0 21 chr2 212593658 212593989 -38093865 - AluJb SINE Alu 0 325 1 941 105 0 0 chr2 212594117 212594241 -38093613 + AluSx SINE Alu 1 124 -188 276 149 0 0 chr2 212594246 212594293 -38093561 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 1220 137 0 0 chr2 212594295 212594470 -38093384 + AluSx SINE Alu 121 295 -17 21 0 0 0 chr2 212595376 212595397 -38092457 + AT_rich Low_complexity Low_complexity 1 21 0 251 240 357 8 chr2 212595720 212595849 -38092005 + MIR SINE MIR 77 250 -12 * 1550 289 122 27 chr2 212595845 212596592 -38091262 + L2 LINE L2 1899 2716 -598 705 182 0 54 chr2 212598103 212598251 -38089603 - FLAM_C SINE Alu -3 140 1 2380 73 0 0 chr2 212599943 212600265 -38087589 - AluY SINE Alu 0 322 1 558 237 115 87 chr2 212601354 212601641 -38086213 - MLT1J LTR MaLR -176 335 41 397 192 73 3 chr2 212603975 212604138 -38083716 - ORSL DNA AcHobo 0 275 62 2401 79 0 3 chr2 212604746 212605051 -38082803 - AluY SINE Alu -7 304 1 226 237 0 0 chr2 212605166 212605225 -38082629 + (TA)n Simple_repeat Simple_repeat 2 60 0 364 292 42 42 chr2 212605581 212605749 -38082105 - MIR SINE MIR -80 182 15 50 59 0 0 chr2 212607191 212607276 -38080578 + AT_rich Low_complexity Low_complexity 1 85 0 1746 124 71 55 chr2 212608752 212609116 -38078738 - THE1C LTR MaLR -1 374 5 771 258 111 26 chr2 212609329 212609635 -38078219 + MER46C DNA MER2_type 7 338 0 2479 65 0 0 chr2 212612215 212612525 -38075329 + AluY SINE Alu 1 310 -1 5057 101 24 32 chr2 212614257 212614997 -38072857 - Tigger4(Zombi) DNA MER2_type 0 2731 1998 573 78 0 0 chr2 212614997 212615074 -38072780 + MADE1 DNA Mariner 1 77 -3 5057 101 24 32 chr2 212615074 212615203 -38072651 - Tigger4(Zombi) DNA MER2_type -733 1998 1869 477 133 0 48 chr2 212615198 212615281 -38072573 - Tigger4(Zombi) DNA MER2_type -2652 79 1 * 514 270 230 15 chr2 212615913 212616183 -38071671 - L2 LINE L2 -6 3307 2980 235 304 62 62 chr2 212616209 212616321 -38071533 - L2 LINE L2 -437 2877 2766 418 312 89 49 chr2 212616328 212616575 -38071279 - L1ME4a LINE L1 -239 5882 5626 6602 25 1 0 chr2 212618283 212619088 -38068766 - L1PA3 LINE L1 0 6155 5350 14191 194 86 17 chr2 212619224 212622886 -38064968 - L1PB1 LINE L1 0 6867 3461 186 43 0 0 chr2 212622886 212622909 -38064945 + (TTCC)n Simple_repeat Simple_repeat 3 25 0 2430 72 0 0 chr2 212622909 212623199 -38064655 - AluSq SINE Alu -23 290 1 14191 194 86 17 chr2 212623199 212624194 -38063660 - L1PB1 LINE L1 -3406 3461 2537 2475 67 0 0 chr2 212624194 212624494 -38063360 + AluY SINE Alu 1 300 -11 14191 194 86 17 chr2 212624494 212626257 -38061597 - L1PB1 LINE L1 -4330 2537 6 1000 132 0 0 chr2 212626781 212626925 -38060929 + AluSg/x SINE Alu 160 303 -9 2158 128 0 10 chr2 212626977 212627289 -38060565 + AluSx SINE Alu 1 309 -3 23 0 0 0 chr2 212627605 212627628 -38060226 + AT_rich Low_complexity Low_complexity 1 23 0 2323 98 0 3 chr2 212627823 212628128 -38059726 + AluSp SINE Alu 2 305 -8 411 333 86 6 chr2 212628586 212628937 -38058917 + L1ME4a LINE L1 5476 5854 -267 253 81 0 0 chr2 212628964 212629001 -38058853 + tRNA-Leu-CTA tRNA tRNA 1 37 -48 2417 141 150 6 chr2 212629174 212629655 -38058199 - MER44D DNA MER2_type 0 605 1 307 284 123 119 chr2 212629995 212630129 -38057725 - MIR SINE MIR -16 246 109 2160 119 0 31 chr2 212630129 212630449 -38057405 + AluSx SINE Alu 1 310 -2 307 284 123 119 chr2 212630449 212630557 -38057297 - MIR SINE MIR -153 109 3 2549 111 10 10 chr2 212630916 212631312 -38056542 + L1PA16 LINE L1 5762 6157 -9 2223 262 113 17 chr2 212631421 212633296 -38054558 - L1ME3A LINE L1 -2 6237 4178 665 291 13 4 chr2 212633670 212633904 -38053950 - L1ME3A LINE L1 -4586 1810 1575 582 196 0 43 chr2 212633985 212634138 -38053716 + L1MB7 LINE L1 3710 3856 -2290 638 278 73 5 chr2 212634139 212634344 -38053510 + MLT1A2 LTR MaLR 1 219 -155 2099 108 13 0 chr2 212634346 212634651 -38053203 + MER1B DNA MER1_type 31 339 0 288 185 0 0 chr2 212634652 212634706 -38053148 + MLT1A2 LTR MaLR 320 373 -1 408 184 61 9 chr2 212634706 212634820 -38053034 + L1MB7 LINE L1 3852 3971 -2175 3688 208 27 10 chr2 212634823 212635751 -38052103 + L1MB7 LINE L1 4015 4958 -1188 9974 182 54 40 chr2 212635752 212638673 -38049181 + L1M2a LINE L1 57 3026 -4142 1037 160 11 0 chr2 212638671 212638846 -38049008 + L1MA5 LINE L1 1465 1641 -5527 * 2730 189 51 38 chr2 212638858 212639105 -38048749 + L1MA5 LINE L1 3039 3281 -3886 552 244 9 0 chr2 212639105 212639220 -38048634 + FLAM_A SINE Alu 1 116 -17 2730 189 51 38 chr2 212639220 212639813 -38048041 + L1MA5 LINE L1 3281 3890 -3277 * 3105 146 21 32 chr2 212639800 212640771 -38047083 + L1MA5 LINE L1 5824 6781 -540 2296 95 0 0 chr2 212640771 212641054 -38046800 + AluSx SINE Alu 1 283 -29 3105 146 21 32 chr2 212641054 212641131 -38046723 + L1MA5 LINE L1 6781 6857 -464 1796 130 14 35 chr2 212641132 212641479 -38046375 + L1MA5 LINE L1 6960 7299 -22 201 39 0 0 chr2 212641506 212641532 -38046322 + (CATA)n Simple_repeat Simple_repeat 2 27 0 4015 167 89 13 chr2 212641614 212641837 -38046017 + L1MB7 LINE L1 4941 5146 -1038 1843 172 3 0 chr2 212641837 212642127 -38045727 + AluJb SINE Alu 1 291 -21 4015 167 89 13 chr2 212642127 212642389 -38045465 + L1MB7 LINE L1 5146 5387 -797 236 0 67 22 chr2 212642389 212642434 -38045420 + (CAA)n Simple_repeat Simple_repeat 2 48 0 4015 167 89 13 chr2 212642434 212643090 -38044764 + L1MB7 LINE L1 5387 6167 -17 987 298 108 14 chr2 212643115 212643273 -38044581 + L2 LINE L2 2668 2810 -503 433 188 0 20 chr2 212643273 212643374 -38044480 + L1PA16 LINE L1 6057 6155 -11 987 298 108 14 chr2 212643374 212643809 -38044045 + L2 LINE L2 2810 3313 0 262 293 27 0 chr2 212644714 212644789 -38043065 - MER5B DNA MER1_type -89 89 13 22 56 0 0 chr2 212644808 212644844 -38043010 + AT_rich Low_complexity Low_complexity 1 36 0 206 304 11 54 chr2 212645564 212645656 -38042198 + MER5B DNA MER1_type 29 116 -62 1957 147 0 0 chr2 212645692 212646007 -38041847 + AluSx SINE Alu 1 315 0 23 54 0 0 chr2 212646050 212646087 -38041767 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 212646175 212646203 -38041651 + AT_rich Low_complexity Low_complexity 1 28 0 22 70 0 0 chr2 212647535 212647578 -38040276 + AT_rich Low_complexity Low_complexity 1 43 0 195 162 0 0 chr2 212647791 212647828 -38040026 + A-rich Low_complexity Low_complexity 5 41 0 21 71 0 0 chr2 212648281 212648323 -38039531 + AT_rich Low_complexity Low_complexity 1 42 0 620 319 46 8 chr2 212648964 212649205 -38038649 - MIR SINE MIR 0 262 13 527 226 98 25 chr2 212649389 212649593 -38038261 + MER112 DNA MER1_type 2 220 -40 412 199 128 21 chr2 212649613 212649754 -38038100 + MER112 DNA MER1_type 99 254 -6 52 41 0 0 chr2 212650771 212650844 -38037010 + GC_rich Low_complexity Low_complexity 1 73 0 205 195 24 0 chr2 212651187 212651228 -38036626 + (CCCA)n Simple_repeat Simple_repeat 2 43 0 492 254 49 7 chr2 212651526 212651668 -38036186 - MIR SINE MIR -14 248 101 579 219 98 11 chr2 212652274 212652457 -38035397 + HsTC2a DNA Tc2 3 201 -543 1091 225 65 88 chr2 212652638 212652988 -38034866 + HsTC2a DNA Tc2 146 502 -1398 1961 152 0 16 chr2 212652988 212653304 -38034550 - AluJb SINE Alu -1 311 1 1091 225 65 88 chr2 212653304 212653403 -38034451 + HsTC2a DNA Tc2 502 602 -1298 2185 94 0 14 chr2 212653403 212653730 -38034124 + AluSx SINE Alu 1 323 0 1091 225 65 88 chr2 212653730 212653876 -38033978 + HsTC2a DNA Tc2 602 625 -1275 1956 160 6 6 chr2 212653876 212654188 -38033666 + AluJb SINE Alu 1 312 0 1091 225 65 88 chr2 212654188 212654236 -38033618 + HsTC2a DNA Tc2 625 673 -71 2029 135 3 3 chr2 212654928 212655232 -38032622 + AluSx SINE Alu 1 304 -8 2343 92 0 0 chr2 212655400 212655695 -38032159 + AluSc SINE Alu 1 295 -14 921 181 25 0 chr2 212655700 212655908 -38031946 + FRAM SINE Alu 1 202 -358 207 0 0 0 chr2 212655908 212655931 -38031923 + (GGGGA)n Simple_repeat Simple_repeat 1 23 0 2323 74 6 29 chr2 212655931 212656243 -38031611 + AluSx SINE Alu 8 312 0 921 181 25 0 chr2 212656243 212656256 -38031598 + FRAM SINE Alu 201 424 0 314 262 14 112 chr2 212656356 212656509 -38031345 + HAL1 LINE L1 2226 2354 -153 1561 161 32 25 chr2 212656509 212656794 -38031060 - AluJo SINE Alu -23 289 3 314 262 14 112 chr2 212656794 212656854 -38031000 + HAL1 LINE L1 2354 2418 -89 2429 76 3 0 chr2 212657382 212657684 -38030170 + AluSp SINE Alu 1 303 -10 1443 239 36 36 chr2 212657904 212658377 -38029477 + MER74A LTR ERVL 1 473 -85 2315 88 7 3 chr2 212658390 212658696 -38029158 + AluSg SINE Alu 2 308 -2 1189 167 16 15 chr2 212659123 212659548 -38028306 + MER67B LTR ERV1 8 476 -185 1378 202 45 27 chr2 212660789 212660908 -38026946 + AluJb SINE Alu 3 118 -194 192 97 0 0 chr2 212660908 212660939 -38026915 + (TAAAA)n Simple_repeat Simple_repeat 5 35 0 1378 202 45 27 chr2 212660939 212661111 -38026743 + AluJb SINE Alu 118 299 -13 713 231 24 12 chr2 212661254 212661423 -38026431 - MER21B LTR ERV1 -367 496 326 * 863 168 43 16 chr2 212661420 212661605 -38026249 + MER67B LTR ERV1 462 651 -10 2200 123 0 3 chr2 212661753 212662061 -38025793 - AluSp SINE Alu -6 307 1 960 261 62 22 chr2 212662100 212662422 -38025432 + MER67B-int LTR ERV1 165 499 -4437 2336 110 0 0 chr2 212663288 212663596 -38024258 + AluSg SINE Alu 3 310 0 2226 96 0 0 chr2 212663975 212664280 -38023574 - AluSg SINE Alu 0 305 1 264 236 73 0 chr2 212665129 212665184 -38022670 + MER89-int LTR ERV1 2567 2625 -4176 446 213 7 113 chr2 212665554 212665704 -38022150 + 7SK RNA RNA 60 193 0 1651 158 10 40 chr2 212666285 212666588 -38021266 - AluJo SINE Alu -18 294 1 1814 147 0 66 chr2 212666637 212666957 -38020897 - AluJb SINE Alu -13 299 1 1442 112 95 22 chr2 212666964 212667235 -38020619 - AluSc SINE Alu 0 320 33 4452 142 37 82 chr2 212667387 212667761 -38020093 - MER54A LTR ERVL 0 901 512 2047 113 0 11 chr2 212667761 212668044 -38019810 + AluSq SINE Alu 1 280 -33 192 40 0 0 chr2 212668045 212668070 -38019784 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4452 142 37 82 chr2 212668070 212668635 -38019219 - MER54A LTR ERVL -388 513 2 1145 156 0 0 chr2 212669434 212669607 -38018247 + FRAM SINE Alu 4 176 0 2227 116 3 3 chr2 212669656 212669958 -38017896 + AluSx SINE Alu 1 302 -10 702 175 7 45 chr2 212670244 212670398 -38017456 + L1MB2 LINE L1 5451 5598 -573 767 205 6 41 chr2 212670450 212670621 -38017233 + FRAM SINE Alu 2 166 0 1711 157 44 20 chr2 212670623 212670917 -38016937 + AluJo SINE Alu 1 301 -11 895 211 44 13 chr2 212670945 212671172 -38016682 + L1MB2 LINE L1 5935 6168 -3 2678 45 0 0 chr2 212671308 212671616 -38016238 + AluY SINE Alu 1 308 -3 865 244 29 68 chr2 212671640 212671951 -38015903 + MER74A LTR ERVL 231 529 -29 311 100 33 83 chr2 212672526 212672586 -38015268 + L1MC/D LINE L1 5728 5784 -2001 2328 89 7 0 chr2 212673228 212673530 -38014324 + AluY SINE Alu 1 304 -7 2461 69 7 0 chr2 212674684 212674988 -38012866 + AluSc SINE Alu 1 306 -3 2469 80 0 0 chr2 212675126 212675426 -38012428 + AluSq SINE Alu 1 300 -13 1460 151 47 36 chr2 212675628 212675932 -38011922 + AluJo SINE Alu 1 307 0 1947 161 7 0 chr2 212675935 212676234 -38011620 + AluJb SINE Alu 2 302 -10 1052 253 100 36 chr2 212676239 212676599 -38011255 + MER21B LTR ERV1 376 758 -105 2043 155 0 0 chr2 212676666 212676975 -38010879 + AluSx SINE Alu 1 309 -3 234 273 23 53 chr2 212677187 212677319 -38010535 + MIR SINE MIR 119 246 -16 2555 71 3 0 chr2 212677427 212677766 -38010088 - AluSp SINE Alu 0 341 2 2331 84 0 19 chr2 212679044 212679353 -38008501 + AluSg SINE Alu 1 303 -7 383 326 84 34 chr2 212679396 212679635 -38008219 + L2 LINE L2 3020 3270 -2 2361 62 0 39 chr2 212679788 212680093 -38007761 - AluY SINE Alu -5 306 14 207 0 0 0 chr2 212680125 212680148 -38007706 + (T)n Simple_repeat Simple_repeat 1 23 0 369 282 51 8 chr2 212680445 212680562 -38007292 - MIR SINE MIR 0 262 141 373 330 81 5 chr2 212680633 212680818 -38007036 + L2 LINE L2 3068 3266 -6 1836 168 14 0 chr2 212680985 212681276 -38006578 - AluJo SINE Alu -15 297 3 21 36 0 0 chr2 212681276 212681304 -38006550 + AT_rich Low_complexity Low_complexity 1 28 0 266 233 0 70 chr2 212681311 212681397 -38006457 - MER116 DNA Mariner 0 80 1 1623 176 33 0 chr2 212682135 212682407 -38005447 + AluJo SINE Alu 1 281 -31 2216 101 21 0 chr2 212683068 212683356 -38004498 - AluSx SINE Alu -18 294 1 2307 104 0 7 chr2 212683364 212683661 -38004193 - AluSq SINE Alu -18 295 1 2276 95 3 10 chr2 212684251 212684546 -38003308 - AluSp SINE Alu -20 293 1 25 31 0 0 chr2 212684547 212684579 -38003275 + AT_rich Low_complexity Low_complexity 1 32 0 198 100 0 60 chr2 212684748 212684761 -38003093 + (GAAA)n Simple_repeat Simple_repeat 2 14 -34 189 74 0 0 chr2 212684761 212684788 -38003066 + (CAGG)n Simple_repeat Simple_repeat 2 28 0 198 100 0 60 chr2 212684788 212684824 -38003030 + (GAAA)n Simple_repeat Simple_repeat 14 48 0 262 338 99 20 chr2 212684925 212685126 -38002728 - MIR SINE MIR -25 237 21 2472 86 0 0 chr2 212685735 212686037 -38001817 + AluSx SINE Alu 1 302 -10 208 272 66 73 chr2 212686223 212686359 -38001495 - MIR SINE MIR -58 204 70 1456 305 22 20 chr2 212686374 212686882 -38000972 + L1M3d LINE L1 3 511 -5380 1997 112 33 13 chr2 212686897 212687202 -38000652 + L1M3 LINE L1 5471 5781 -387 2337 95 0 0 chr2 212687202 212687497 -38000357 + AluSx SINE Alu 1 295 -17 2068 135 27 3 chr2 212687588 212687884 -37999970 + MER1B DNA MER1_type 37 339 0 450 94 31 0 chr2 212687888 212687952 -37999902 + MER58 DNA MER1_type 2355 2420 0 2069 132 0 46 chr2 212688233 212688419 -37999435 - AluJo SINE Alu -2 310 117 287 0 53 0 chr2 212688419 212688457 -37999397 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 2189 114 0 0 chr2 212688457 212688738 -37999116 - AluSx SINE Alu -31 281 1 2069 132 0 46 chr2 212688738 212688875 -37998979 - AluJo SINE Alu -193 119 1 880 133 0 49 chr2 212689705 212689848 -37998006 + AluSq/x SINE Alu 1 136 -176 266 246 18 0 chr2 212689951 212690008 -37997846 + LTR67 LTR ERVL 116 173 -384 1619 190 44 0 chr2 212690072 212690346 -37997508 + AluJo SINE Alu 1 286 -26 1935 144 0 24 chr2 212690703 212691001 -37996853 + AluSx SINE Alu 1 291 -21 383 270 105 0 chr2 212691103 212691255 -37996599 - MIR SINE MIR -46 216 49 1957 133 14 7 chr2 212691661 212691954 -37995900 - AluJb SINE Alu -17 295 1 2244 73 6 60 chr2 212692266 212692582 -37995272 + AluSq SINE Alu 1 299 -14 384 283 45 97 chr2 212693270 212693446 -37994408 - LTR16C LTR ERVL 0 491 336 1443 99 19 0 chr2 212693446 212693659 -37994195 - L1MA5A LINE L1 -3 6294 6078 384 283 45 97 chr2 212693659 212693793 -37994061 - LTR16C LTR ERVL -155 336 197 1953 111 12 87 chr2 212694081 212694178 -37993676 + AluSx SINE Alu 1 104 -208 2543 60 0 0 chr2 212694178 212694477 -37993377 + AluY SINE Alu 1 299 -12 1953 111 12 87 chr2 212694477 212694713 -37993141 + AluSx SINE Alu 104 309 -3 333 185 0 0 chr2 212694713 212694778 -37993076 + GA-rich Low_complexity Low_complexity 3 67 0 225 0 0 0 chr2 212695859 212695884 -37991970 + (CCCCAG)n Simple_repeat Simple_repeat 1 25 0 844 247 13 35 chr2 212696243 212696470 -37991384 - MLT1I LTR MaLR 0 409 188 21 0 0 0 chr2 212696597 212696618 -37991236 + AT_rich Low_complexity Low_complexity 1 21 0 2366 98 0 3 chr2 212696628 212696925 -37990929 - AluSp SINE Alu -17 296 1 2217 105 0 7 chr2 212696955 212697249 -37990605 + AluSx SINE Alu 3 294 -18 197 355 71 5 chr2 212697276 212697487 -37990367 + L2 LINE L2 1807 2031 -1283 1708 207 81 145 chr2 212697490 212698511 -37989343 - L1MC5 LINE L1 -184 7777 6855 2258 104 0 0 chr2 212698511 212698800 -37989054 + AluSx SINE Alu 1 289 -23 1708 207 81 145 chr2 212698800 212699132 -37988722 - L1MC5 LINE L1 -1106 6855 6503 31 68 0 0 chr2 212699132 212699191 -37988663 + AT_rich Low_complexity Low_complexity 1 59 0 296 294 91 45 chr2 212699328 212699637 -37988217 - L1MC4a LINE L1 -1370 6438 6116 978 196 0 0 chr2 212699649 212699812 -37988042 - FRAM SINE Alu -14 162 1 206 368 0 0 chr2 212699909 212700004 -37987850 + (CATATA)n Simple_repeat Simple_repeat 3 97 0 444 227 231 30 chr2 212701083 212701286 -37986568 + L1ME4a LINE L1 5799 6042 -79 842 139 0 0 chr2 212701289 212701404 -37986450 - FLAM_C SINE Alu -23 120 6 2452 85 3 0 chr2 212701444 212701750 -37986104 + AluSq SINE Alu 5 311 -2 1985 165 0 9 chr2 212701790 212702105 -37985749 - AluJb SINE Alu 0 312 1 2147 98 31 3 chr2 212702459 212702745 -37985109 + AluSq SINE Alu 1 294 -19 1794 166 59 0 chr2 212702755 212703044 -37984810 + AluJo SINE Alu 3 308 -4 541 200 42 0 chr2 212703050 212703170 -37984684 + L1MB2 LINE L1 6005 6129 -42 2277 79 0 4 chr2 212703173 212703453 -37984401 + AluSc SINE Alu 1 279 -30 800 214 0 0 chr2 212703499 212703653 -37984201 + AluJb SINE Alu 158 311 -1 907 228 0 12 chr2 212703671 212703838 -37984016 + FAM SINE Alu 1 165 -10 1020 176 99 150 chr2 212703970 212704247 -37983607 + MER34B LTR ERV1 1 234 -331 923 115 4 179 chr2 212704247 212704481 -37983373 - 7SK RNA RNA 0 193 1 1020 176 99 150 chr2 212704481 212704798 -37983056 + MER34B LTR ERV1 234 565 0 336 242 63 11 chr2 212704825 212704920 -37982934 - MER97c DNA MER1_type? 0 1090 991 1417 194 75 0 chr2 212704945 212705223 -37982631 - AluJo SINE Alu -7 305 7 2509 198 51 96 chr2 212705456 212705592 -37982262 - MER97b DNA MER1_type? -194 859 718 1666 147 14 18 chr2 212705592 212705871 -37981983 - AluJo SINE Alu 0 312 35 2509 198 51 96 chr2 212705871 212705895 -37981959 - MER97b DNA MER1_type? -335 718 694 2287 115 0 0 chr2 212705895 212706191 -37981663 + AluSx SINE Alu 1 296 -16 2509 198 51 96 chr2 212706191 212706919 -37980935 - MER97b DNA MER1_type? -359 694 10 608 228 66 87 chr2 212707188 212707477 -37980377 - MER102b DNA MER1_type -48 293 11 763 172 0 0 chr2 212709217 212709333 -37978521 + AluJo/FLAM SINE Alu 3 118 -194 2161 113 3 3 chr2 212709333 212709625 -37978229 - AluSx SINE Alu -20 292 1 24 0 0 0 chr2 212709633 212709657 -37978197 + AT_rich Low_complexity Low_complexity 1 24 0 238 300 0 0 chr2 212709846 212709906 -37977948 + MIR SINE MIR 18 77 -185 2551 55 3 10 chr2 212710872 212711182 -37976672 + AluY SINE Alu 1 308 -3 1913 84 54 8 chr2 212711370 212711631 -37976223 + AluSg SINE Alu 34 306 -4 2370 104 0 0 chr2 212711643 212711951 -37975903 + AluSx SINE Alu 1 308 -4 313 209 67 29 chr2 212713731 212713836 -37974018 - MER34 LTR ERV1 0 542 434 516 133 0 33 chr2 212713878 212713968 -37973886 + AluJ/FRAM SINE Alu 216 302 -10 240 211 0 0 chr2 212714009 212714066 -37973788 + T-rich Low_complexity Low_complexity 1 57 0 1538 134 30 4 chr2 212714246 212714477 -37973377 + AluSg/x SINE Alu 67 303 -7 2309 110 0 7 chr2 212715036 212715344 -37972510 + AluSp SINE Alu 1 306 -7 3139 89 19 40 chr2 212715353 212715553 -37972301 + L1PA11 LINE L1 5710 5913 -261 2057 109 68 7 chr2 212715553 212715847 -37972007 + AluSx SINE Alu 1 312 0 2703 48 0 0 chr2 212715849 212716158 -37971696 + AluY SINE Alu 1 309 -2 3139 89 19 40 chr2 212716158 212716427 -37971427 + L1PA11 LINE L1 5914 6172 -2 2052 145 0 3 chr2 212716444 212716741 -37971113 - AluSx SINE Alu -16 296 1 249 200 0 0 chr2 212716747 212716797 -37971057 + MER116 DNA Mariner 31 80 0 1607 165 0 95 chr2 212716826 212717153 -37970701 + AluJo SINE Alu 1 296 -6 1569 175 34 7 chr2 212717247 212717538 -37970316 - AluJo SINE Alu -13 299 1 282 356 116 0 chr2 212717580 212717726 -37970128 - L2 LINE L2 -5 3267 3105 2205 127 10 0 chr2 212717759 212718067 -37969787 + AluSp SINE Alu 3 313 0 394 265 51 8 chr2 212718147 212718264 -37969590 + MIR SINE MIR 141 262 0 2059 114 38 7 chr2 212718357 212718647 -37969207 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr2 212718858 212718879 -37968975 + AT_rich Low_complexity Low_complexity 1 21 0 357 219 24 0 chr2 212719030 212719112 -37968742 - L2 LINE L2 -2 3311 3228 2367 70 3 0 chr2 212719798 212720108 -37967746 + AluSp SINE Alu 1 311 0 1770 139 24 31 chr2 212720140 212720428 -37967426 + AluJo SINE Alu 16 301 -11 1207 126 0 6 chr2 212721072 212721247 -37966607 + AluSg/x SINE Alu 134 307 -3 2711 33 0 7 chr2 212721422 212721726 -37966128 - AluY SINE Alu -9 302 1 273 238 12 0 chr2 212721735 212721819 -37966035 - MIR SINE MIR -11 251 167 399 156 0 52 chr2 212721969 212722046 -37965808 + AluJo SINE Alu 116 188 -114 * 1135 230 99 18 chr2 212722043 212722386 -37965468 - MER21B LTR ERV1 -295 568 198 2327 72 3 44 chr2 212722442 212722762 -37965092 - AluSx SINE Alu -5 307 1 929 166 18 12 chr2 212723174 212723337 -37964517 + AluJb SINE Alu 137 300 -12 21 0 0 0 chr2 212723411 212723432 -37964422 + AT_rich Low_complexity Low_complexity 1 21 0 212 220 297 11 chr2 212723652 212723743 -37964111 + L2 LINE L2 3189 3305 -8 887 266 154 30 chr2 212723757 212724186 -37963668 - L3 LINE CR1 -174 1403 922 1499 212 44 0 chr2 212724558 212724851 -37963003 + AluJo SINE Alu 1 306 -6 701 188 8 0 chr2 212725039 212725167 -37962687 + FLAM_A SINE Alu 5 133 0 2230 110 3 0 chr2 212725354 212725655 -37962199 - AluSq SINE Alu -11 302 1 2006 115 49 7 chr2 212725915 212726203 -37961651 + AluSx SINE Alu 1 300 -12 2073 106 11 14 chr2 212726398 212726682 -37961172 - AluSx SINE Alu -29 283 1 231 315 54 23 chr2 212727384 212727514 -37960340 - MIR3 SINE MIR -61 147 14 333 152 109 17 chr2 212727563 212727688 -37960166 + MER96B DNA MER1_type? 4 179 -238 969 120 0 0 chr2 212727968 212728093 -37959761 + FLAM_C SINE Alu 1 125 -18 2298 86 0 7 chr2 212728589 212728890 -37958964 + AluSc SINE Alu 1 299 -10 2024 125 11 0 chr2 212729384 212729704 -37958150 - AluSx SINE Alu 0 323 1 2292 102 3 0 chr2 212729820 212730124 -37957730 - AluSp SINE Alu -8 305 1 239 317 102 37 chr2 212730471 212730717 -37957137 - L3 LINE CR1 -312 1265 1004 2504 77 0 10 chr2 212730742 212731052 -37956802 + AluY SINE Alu 2 308 -3 1874 126 83 0 chr2 212731061 212731338 -37956516 + AluSx SINE Alu 1 300 -12 1954 143 0 0 chr2 212732421 212732694 -37955160 + AluSx SINE Alu 24 296 -16 1729 178 17 7 chr2 212732721 212733014 -37954840 - MER2 DNA MER2_type -49 296 1 523 200 109 9 chr2 212733232 212733376 -37954478 - FLAM_C SINE Alu 0 155 1 273 119 25 51 chr2 212733376 212733494 -37954360 + A-rich Low_complexity Low_complexity 4 118 0 1751 159 3 29 chr2 212733518 212733654 -37954200 + AluJb SINE Alu 2 140 -172 2375 85 0 13 chr2 212733654 212733959 -37953895 + AluSg SINE Alu 1 301 -9 1751 159 3 29 chr2 212733959 212734136 -37953718 + AluJb SINE Alu 140 307 -5 229 222 56 0 chr2 212734225 212734279 -37953575 - Charlie8 DNA MER1_type -989 1428 1372 697 284 18 13 chr2 212734468 212734697 -37953157 - MIR SINE MIR -7 255 26 2263 125 0 0 chr2 212736132 212736444 -37951410 - AluSx SINE Alu 0 312 1 1842 124 0 115 chr2 212737564 212737895 -37949959 + AluSx SINE Alu 2 294 -18 226 233 0 0 chr2 212738031 212738074 -37949780 + (TATG)n Simple_repeat Simple_repeat 4 46 0 600 125 0 0 chr2 212738489 212738577 -37949277 - AluSc SINE Alu -7 302 215 1085 129 0 13 chr2 212738577 212738732 -37949122 - AluSq SINE Alu -160 153 1 758 168 0 8 chr2 212738760 212738891 -37948963 - FLAM_C SINE Alu -3 130 1 546 94 0 35 chr2 212738923 212739008 -37948846 + AluJ/FRAM SINE Alu 220 301 -11 2380 85 7 0 chr2 212739386 212739679 -37948175 + AluY SINE Alu 1 295 -16 1015 290 84 50 chr2 212739979 212740511 -37947343 + L2 LINE L2 2499 3079 -234 1981 132 14 0 chr2 212740511 212740814 -37947040 + AluSx SINE Alu 1 307 0 1015 290 84 50 chr2 212740814 212741058 -37946796 + L2 LINE L2 3079 3313 0 2140 129 65 62 chr2 212741100 212741202 -37946652 + MLT1C LTR MaLR 3 103 -364 2225 119 10 0 chr2 212741202 212741512 -37946342 + AluSq SINE Alu 1 313 0 2140 129 65 62 chr2 212741512 212741873 -37945981 + MLT1C LTR MaLR 103 467 0 2002 112 21 11 chr2 212742879 212743166 -37944688 + AluSg SINE Alu 1 290 -20 320 335 112 0 chr2 212743275 212743436 -37944418 - L2 LINE L2 -3 3310 3132 442 271 35 21 chr2 212743463 212743607 -37944247 + MIR SINE MIR 12 157 -105 2226 139 5 46 chr2 212743607 212743818 -37944036 + Tigger2a DNA MER2_type 1 190 -2518 2203 133 7 0 chr2 212743818 212744126 -37943728 - AluSq SINE Alu -3 310 1 2226 139 5 46 chr2 212744126 212744302 -37943552 + Tigger2a DNA MER2_type 190 372 -62 686 188 8 0 chr2 212744314 212744431 -37943423 + FLAM_A SINE Alu 10 127 -15 1971 120 4 11 chr2 212744437 212744712 -37943142 + AluSx SINE Alu 1 273 -39 1982 132 0 17 chr2 212744739 212745062 -37942792 + AluSx SINE Alu 3 320 0 1726 197 3 0 chr2 212745063 212745358 -37942496 + AluJo SINE Alu 1 296 -16 318 184 0 79 chr2 212745358 212745434 -37942420 + Tigger2a DNA MER2_type 365 434 0 727 164 0 0 chr2 212745454 212745570 -37942284 - FLAM_C SINE Alu -9 134 19 190 237 263 0 chr2 212745573 212745649 -37942205 + MIR SINE MIR 167 262 0 33 43 0 0 chr2 212745649 212745696 -37942158 + AT_rich Low_complexity Low_complexity 1 47 0 185 333 44 0 chr2 212745705 212745795 -37942059 - L2 LINE L2 -213 3059 2966 1034 62 4 2 chr2 212746168 212746422 -37941432 + AluSc SINE Alu 1 304 -5 2511 87 3 0 chr2 212746422 212746734 -37941120 + AluSp SINE Alu 1 313 0 1840 147 3 49 chr2 212746848 212747181 -37940673 + AluSq SINE Alu 1 313 0 1596 158 57 18 chr2 212747524 212747803 -37940051 - AluJo SINE Alu -22 290 1 1978 160 7 0 chr2 212748111 212748405 -37939449 + AluJb SINE Alu 2 297 -15 2172 109 3 0 chr2 212750000 212750314 -37937540 + AluSp SINE Alu 1 315 0 867 265 75 32 chr2 212750653 212751131 -37936723 - MLT1H1 LTR MaLR -4 586 8 1444 103 5 0 chr2 212751181 212751375 -37936479 + L1PA16 LINE L1 5743 5937 -229 2460 90 7 0 chr2 212751375 212751685 -37936169 + AluSx SINE Alu 1 312 0 2254 102 0 7 chr2 212751698 212751992 -37935862 + AluSg SINE Alu 1 292 -18 759 142 21 28 chr2 212751993 212752134 -37935720 + L1PA16 LINE L1 6027 6166 0 1279 145 50 0 chr2 212752360 212752560 -37935294 + LTR47A LTR ERVL 205 414 -38 1220 0 0 49 chr2 212752636 212752880 -37934974 + (TCTCCC)n Simple_repeat Simple_repeat 1 231 0 9420 38 13 185 chr2 212752884 212754497 -37933357 + SVA Other Other 52 1386 0 1052 123 12 29 chr2 212754820 212754991 -37932863 + THE1B LTR MaLR 197 364 0 2796 73 11 0 chr2 212754991 212755349 -37932505 + THE1B-int LTR MaLR 1 362 -1218 2107 123 87 15 chr2 212755356 212755690 -37932164 - THE1B LTR MaLR -6 358 1 752 62 54 0 chr2 212755690 212755802 -37932052 - THE1B-int LTR MaLR 0 1580 1463 1221 96 6 0 chr2 212755802 212755958 -37931896 + AluSp SINE Alu 1 157 -156 6781 92 21 8 chr2 212755958 212756866 -37930988 - THE1B-int LTR MaLR -317 1263 344 843 81 122 8 chr2 212756890 212757013 -37930841 - THE1B LTR MaLR -227 137 1 3831 108 2 6 chr2 212757013 212757533 -37930321 + THE1B-int LTR MaLR 359 876 -704 2249 114 0 0 chr2 212757912 212758209 -37929645 + AluSx SINE Alu 1 297 -15 1926 155 26 7 chr2 212758733 212759037 -37928817 + AluJo SINE Alu 1 310 -2 2052 109 3 3 chr2 212759198 212759504 -37928350 + AluSg SINE Alu 1 306 0 387 252 5 70 chr2 212759515 212759691 -37928163 + L1ME LINE L1 5664 5825 -296 884 52 139 0 chr2 212759746 212759861 -37927993 - AluSg SINE Alu -179 131 1 2009 96 89 0 chr2 212759862 212760133 -37927721 - AluSc SINE Alu -14 295 1 2305 97 0 3 chr2 212760338 212760636 -37927218 - AluY SINE Alu -14 297 1 2312 115 0 0 chr2 212761237 212761541 -37926313 + AluSx SINE Alu 1 304 -8 1628 194 21 0 chr2 212762124 212762413 -37925441 - AluJb SINE Alu -17 295 1 220 188 0 0 chr2 212763627 212763659 -37924195 - MIR SINE MIR -194 68 37 2061 91 45 7 chr2 212763691 212763977 -37923877 - AluSg1 SINE Alu -12 297 1 279 276 172 20 chr2 212767006 212767216 -37920638 - L2 LINE L2 -197 3116 2939 2476 50 3 0 chr2 212767216 212767514 -37920340 + AluY SINE Alu 1 299 -12 279 276 172 20 chr2 212767514 212767607 -37920247 - L2 LINE L2 -374 2939 2526 215 189 0 0 chr2 212768074 212768111 -37919743 - L2 LINE L2 -89 3224 3188 2036 115 25 0 chr2 212768228 212768506 -37919348 + AluSx SINE Alu 2 286 -26 1723 183 0 7 chr2 212768886 212769187 -37918667 - AluJo SINE Alu -13 299 1 2390 60 0 0 chr2 212769195 212769478 -37918376 - AluY SINE Alu -10 301 19 1785 123 11 131 chr2 212769624 212769760 -37918094 + AluYb8 SINE Alu 1 152 -156 1868 117 42 0 chr2 212769760 212770024 -37917830 + AluSx SINE Alu 1 275 -37 1785 123 11 131 chr2 212770024 212770063 -37917791 + AluYb8 SINE Alu 152 194 -114 1974 126 10 7 chr2 212770063 212770381 -37917473 + AluY SINE Alu 1 311 0 1785 123 11 131 chr2 212770381 212770554 -37917300 + AluYb8 SINE Alu 194 308 0 2200 117 3 3 chr2 212770556 212770865 -37916989 + AluSg SINE Alu 1 309 -1 1117 156 96 15 chr2 212770964 212771163 -37916691 - MER20 DNA MER1_type -4 215 1 199 315 43 11 chr2 212771590 212771682 -37916172 + MIR SINE MIR 67 145 -63 1999 164 0 0 chr2 212771982 212772292 -37915562 + AluSx SINE Alu 1 310 -2 2303 105 3 0 chr2 212772478 212772784 -37915070 + AluSx SINE Alu 5 311 -1 2286 82 14 3 chr2 212773319 212773612 -37914242 + AluSg SINE Alu 3 298 -12 180 321 152 62 chr2 212774696 212774808 -37913046 - L2 LINE L2 -973 2341 2220 247 274 147 10 chr2 212774810 212774912 -37912942 + L2 LINE L2 3194 3309 -4 279 0 0 0 chr2 212775423 212775454 -37912400 + (TAGA)n Simple_repeat Simple_repeat 2 32 0 225 0 0 0 chr2 212775519 212775544 -37912310 + (T)n Simple_repeat Simple_repeat 1 25 0 28 48 0 0 chr2 212776278 212776320 -37911534 + AT_rich Low_complexity Low_complexity 1 42 0 799 170 0 30 chr2 212776840 212776975 -37910879 - FLAM_C SINE Alu -2 131 1 604 68 0 0 chr2 212777071 212777145 -37910709 + FLAM SINE Alu 53 126 -17 2135 112 0 23 chr2 212777253 212777558 -37910296 + AluSx SINE Alu 1 298 -14 290 219 0 0 chr2 212778164 212778229 -37909625 + L1ME3A LINE L1 6095 6161 -3 339 325 82 5 chr2 212778902 212779096 -37908758 - L1ME LINE L1 -347 5774 5566 451 230 54 34 chr2 212779106 212779254 -37908600 - L1M4b LINE L1 -5204 1655 1505 288 267 102 58 chr2 212779307 212779532 -37908322 - L1M4b LINE L1 -5667 1188 954 378 127 9 0 chr2 212779934 212779993 -37907861 - L1MC4 LINE L1 -891 6990 6855 644 154 26 2 chr2 212780054 212780290 -37907564 + AluJo SINE Alu 2 291 -21 525 119 0 0 chr2 212780872 212780939 -37906915 + AluJ/FLAM SINE Alu 2 68 -244 237 298 111 89 chr2 212781584 212781809 -37906045 - L2 LINE L2 -5 3267 3038 689 62 0 0 chr2 212781810 212781891 -37905963 + AluSg/x SINE Alu 215 295 -17 227 374 43 9 chr2 212781896 212782011 -37905843 - L2 LINE L2 -229 3043 2925 1921 139 0 20 chr2 212782204 212782506 -37905348 - AluSq SINE Alu -15 298 3 2146 113 0 7 chr2 212782966 212783257 -37904597 + AluSx SINE Alu 4 292 -20 21 57 0 0 chr2 212783561 212783596 -37904258 + AT_rich Low_complexity Low_complexity 1 35 0 698 66 22 0 chr2 212783662 212783753 -37904101 - Alu SINE Alu -10 300 208 912 88 0 0 chr2 212783753 212783867 -37903987 - AluY SINE Alu -197 114 1 42 20 0 0 chr2 212783867 212783916 -37903938 + AT_rich Low_complexity Low_complexity 1 49 0 2334 63 40 0 chr2 212783916 212784215 -37903639 - AluY SINE Alu 0 311 1 838 150 8 16 chr2 212784215 212784342 -37903512 - AluJo/FLAM SINE Alu -174 128 3 647 216 70 54 chr2 212784409 212784533 -37903321 - L1MC4 LINE L1 0 8042 7922 230 79 0 26 chr2 212784533 212784571 -37903283 + (TA)n Simple_repeat Simple_repeat 1 37 0 647 216 70 54 chr2 212784571 212784687 -37903167 - L1MC4 LINE L1 -120 7922 7798 2289 99 7 0 chr2 212784699 212784992 -37902862 + AluSp SINE Alu 1 295 -18 753 170 0 0 chr2 212785021 212785133 -37902721 - AluSc SINE Alu -76 233 122 1580 192 0 18 chr2 212785135 212785416 -37902438 - AluJo SINE Alu -36 276 1 269 254 159 36 chr2 212785416 212785636 -37902218 - L1MC4 LINE L1 -267 7775 7529 452 212 102 17 chr2 212785676 212785794 -37902060 + MER94 DNA DNA 2 129 -5 22 70 0 0 chr2 212785948 212785991 -37901863 + AT_rich Low_complexity Low_complexity 1 43 0 2064 116 0 3 chr2 212785991 212786302 -37901552 + AluSx SINE Alu 1 310 0 2131 130 3 13 chr2 212786329 212786644 -37901210 - AluSq SINE Alu -1 312 1 23 0 0 0 chr2 212787026 212787049 -37900805 + AT_rich Low_complexity Low_complexity 1 23 0 1983 102 35 18 chr2 212787097 212787382 -37900472 + AluSx SINE Alu 1 290 -22 615 239 165 39 chr2 212787389 212787674 -37900180 - HAL1b LINE L1 -40 1308 988 526 211 115 48 chr2 212787708 212787917 -37899937 - HAL1b LINE L1 -668 680 458 2049 84 18 22 chr2 212787984 212788258 -37899596 - AluSg SINE Alu -11 299 27 234 294 50 42 chr2 212788265 212788384 -37899470 - HAL1b LINE L1 -1002 346 227 2344 105 10 0 chr2 212788425 212788731 -37899123 + AluSp SINE Alu 1 309 -4 2412 95 0 0 chr2 212788744 212789050 -37898804 + AluSx SINE Alu 1 306 -6 2181 109 19 29 chr2 212789126 212789439 -37898415 + AluSg SINE Alu 1 310 0 22 70 0 0 chr2 212789652 212789695 -37898159 + AT_rich Low_complexity Low_complexity 1 43 0 2313 90 6 16 chr2 212789773 212790085 -37897769 - AluSc SINE Alu 0 309 1 1932 125 7 30 chr2 212790160 212790455 -37897399 + AluSx SINE Alu 9 296 -16 1538 192 4 7 chr2 212790506 212790782 -37897072 - AluJo SINE Alu -35 277 3 494 168 21 0 chr2 212790869 212790964 -37896890 - AluSg/x SINE Alu -1 308 212 914 174 50 0 chr2 212790965 212791126 -37896728 - AluJb SINE Alu -143 169 1 2016 123 3 7 chr2 212791478 212791782 -37896072 - AluSx SINE Alu 0 303 1 1546 152 76 43 chr2 212792874 212793176 -37894678 - AluJo SINE Alu 0 312 1 589 283 88 60 chr2 212793176 212793335 -37894519 - L1ME4a LINE L1 -1 6120 5967 1915 140 0 20 chr2 212793335 212793503 -37894351 - AluSx SINE Alu -13 299 138 2126 113 0 7 chr2 212793503 212793822 -37894032 - AluY SINE Alu 0 311 1 1915 140 0 20 chr2 212793822 212793953 -37893901 - AluSx SINE Alu -174 138 6 589 283 88 60 chr2 212793953 212794330 -37893524 - L1ME4a LINE L1 -154 5967 5569 2190 111 0 0 chr2 212794823 212795103 -37892751 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr2 212795112 212795132 -37892722 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 2352 101 0 0 chr2 212795587 212795884 -37891970 + AluSq SINE Alu 2 298 -15 1773 158 4 0 chr2 212795920 212796186 -37891668 + AluJo SINE Alu 5 271 -41 26 50 0 0 chr2 212796186 212796226 -37891628 + AT_rich Low_complexity Low_complexity 1 40 0 2011 138 0 10 chr2 212796686 212796982 -37890872 - AluSx SINE Alu -19 293 1 2390 76 0 3 chr2 212797012 212797301 -37890553 + AluY SINE Alu 1 288 -23 560 148 0 23 chr2 212797830 212797918 -37889936 + FRAM SINE Alu 71 156 -20 1843 145 59 3 chr2 212797936 212798226 -37889628 - AluSx SINE Alu -6 306 1 21 36 0 0 chr2 212799152 212799180 -37888674 + AT_rich Low_complexity Low_complexity 1 28 0 1438 123 0 0 chr2 212799605 212799808 -37888046 + L1PA14 LINE L1 5942 6144 -17 25 65 0 0 chr2 212799925 212799971 -37887883 + AT_rich Low_complexity Low_complexity 1 46 0 201 74 0 0 chr2 212799980 212800007 -37887847 + (TG)n Simple_repeat Simple_repeat 2 28 0 1796 188 0 0 chr2 212800011 212800298 -37887556 - AluJb SINE Alu -25 287 1 860 153 0 15 chr2 212800332 212800463 -37887391 + FLAM_C SINE Alu 1 129 -4 415 165 25 0 chr2 212800484 212800563 -37887291 - L1MB8 LINE L1 -4 6174 6094 2243 89 0 3 chr2 212800613 212800920 -37886934 - AluY SINE Alu 0 306 1 22 0 0 0 chr2 212801376 212801398 -37886456 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 212801735 212801756 -37886098 + AT_rich Low_complexity Low_complexity 1 21 0 611 258 96 25 chr2 212801762 212802002 -37885852 - MIR SINE MIR 0 262 6 25 31 0 0 chr2 212802407 212802439 -37885415 + AT_rich Low_complexity Low_complexity 1 32 0 2071 131 7 3 chr2 212802443 212802740 -37885114 + AluJb SINE Alu 1 298 -14 2332 109 0 3 chr2 212802820 212803131 -37884723 - AluSx SINE Alu -2 310 1 777 209 0 8 chr2 212803206 212803340 -37884514 + AluJo SINE Alu 4 136 -176 1956 128 3 14 chr2 212803726 212804036 -37883818 + AluSx SINE Alu 1 307 0 200 254 0 63 chr2 212804412 212804475 -37883379 - MIR SINE MIR -137 125 67 486 221 21 0 chr2 212804554 212804649 -37883205 + FLAM_A SINE Alu 1 97 -45 3151 141 29 18 chr2 212804656 212805216 -37882638 - MSTB-int LTR MaLR -1081 570 5 2534 151 57 5 chr2 212805217 212805622 -37882232 - MSTB LTR MaLR 0 426 1 2131 110 3 26 chr2 212805763 212806072 -37881782 + AluSx SINE Alu 1 302 -10 361 191 15 118 chr2 212806138 212806274 -37881580 + MIR SINE MIR 124 245 -17 2127 122 3 3 chr2 212806369 212806673 -37881181 - AluSx SINE Alu -8 304 1 1055 111 0 0 chr2 212806673 212806808 -37881046 - AluSq/x SINE Alu -177 135 1 1883 141 0 14 chr2 212806857 212807134 -37880720 - AluJb SINE Alu -39 273 1 22 0 0 0 chr2 212807155 212807177 -37880677 + AT_rich Low_complexity Low_complexity 1 22 0 1715 110 0 4 chr2 212807805 212808041 -37879813 + AluSg1 SINE Alu 61 295 -14 260 132 0 0 chr2 212808232 212808270 -37879584 - MLT1A1 LTR MaLR -13 383 346 1512 173 4 18 chr2 212808298 212808433 -37879421 - AluJb SINE Alu -44 268 137 2246 105 13 10 chr2 212808433 212808738 -37879116 - AluSg SINE Alu -4 306 1 1512 173 4 18 chr2 212808738 212808874 -37878980 - AluJb SINE Alu -175 137 1 896 186 152 65 chr2 212809915 212810205 -37877649 - MLT1A1 LTR MaLR -50 315 1 1100 97 86 17 chr2 212810205 212810380 -37877474 - MLT1A1-int LTR MaLR 0 1735 1549 388 268 62 26 chr2 212810392 212810586 -37877268 + L1MC4a LINE L1 5705 5905 -1903 2152 102 35 0 chr2 212810776 212811059 -37876795 + AluSp SINE Alu 1 293 -20 2220 85 7 7 chr2 212811109 212811425 -37876429 + AluSx SINE Alu 3 318 0 1218 141 0 0 chr2 212811425 212811595 -37876259 + AluSg/x SINE Alu 133 302 -10 1012 224 93 114 chr2 212811626 212812198 -37875656 + MLT1F1 LTR MaLR 1 567 0 1372 239 11 0 chr2 212812227 212812511 -37875343 + LTR16A LTR ERVL 164 450 0 289 257 110 33 chr2 212812595 212812739 -37875115 - MLT1J LTR MaLR -275 199 59 1700 234 48 79 chr2 212812745 212813326 -37874528 - MLT1G LTR MaLR 0 590 28 1906 170 0 10 chr2 212813419 212813719 -37874135 + AluJo SINE Alu 1 297 -15 1591 148 9 102 chr2 212813894 212814091 -37873763 - AluJb SINE Alu -1 301 146 2241 138 0 0 chr2 212814091 212814403 -37873451 - AluSx SINE Alu 0 312 1 1591 148 9 102 chr2 212814403 212814537 -37873317 - AluJb SINE Alu -156 146 1 21 0 0 0 chr2 212814808 212814829 -37873025 + AT_rich Low_complexity Low_complexity 1 21 0 2510 65 0 3 chr2 212815111 212815417 -37872437 - AluY SINE Alu 0 311 7 189 0 0 0 chr2 212815417 212815438 -37872416 + (CCTG)n Simple_repeat Simple_repeat 4 24 0 239 190 17 0 chr2 212815441 212815499 -37872355 + CT-rich Low_complexity Low_complexity 3 61 0 2011 129 16 26 chr2 212815503 212815814 -37872040 - AluSx SINE Alu 0 312 5 2051 151 13 10 chr2 212815820 212816131 -37871723 - AluJb SINE Alu 0 312 1 2287 88 7 3 chr2 212816161 212816458 -37871396 + AluY SINE Alu 1 298 -13 2194 103 6 47 chr2 212817063 212817383 -37870471 + AluSq SINE Alu 1 307 -6 329 222 22 22 chr2 212817386 212817476 -37870378 + L1MC4 LINE L1 6614 6703 -1339 2061 126 0 44 chr2 212817528 212817846 -37870008 + AluSx SINE Alu 1 304 -8 2232 91 0 7 chr2 212817952 212818261 -37869593 + AluSx SINE Alu 2 308 0 2519 27 0 27 chr2 212818695 212818994 -37868860 + AluY SINE Alu 1 291 -20 2074 129 0 0 chr2 212819354 212819648 -37868206 - AluSg SINE Alu -16 294 1 2138 140 0 0 chr2 212819963 212820263 -37867591 + AluSx SINE Alu 1 300 -12 22 70 0 0 chr2 212820302 212820345 -37867509 + AT_rich Low_complexity Low_complexity 1 43 0 870 127 0 0 chr2 212820536 212820654 -37867200 - FLAM_C SINE Alu -25 118 1 1575 192 51 0 chr2 212820658 212820934 -37866920 - AluJo SINE Alu -20 292 3 1013 132 0 0 chr2 212821147 212821283 -37866571 + AluJo SINE Alu 11 146 -166 2390 96 0 3 chr2 212821284 212821587 -37866267 + AluSq SINE Alu 1 302 -11 379 255 255 37 chr2 212822104 212822292 -37865562 + MIR SINE MIR 34 262 0 1948 122 54 0 chr2 212822321 212822600 -37865254 + AluSq SINE Alu 1 294 -19 746 177 23 0 chr2 212822634 212822764 -37865090 + FLAM_C SINE Alu 1 133 0 1898 119 13 63 chr2 212822989 212823292 -37864562 + AluSx SINE Alu 11 298 -14 228 269 75 0 chr2 212823380 212823447 -37864407 + L2 LINE L2 3242 3313 0 2041 123 7 23 chr2 212823790 212824090 -37863764 + AluSx SINE Alu 1 295 -17 2228 203 86 19 chr2 212824200 212824783 -37863071 + MLT1D LTR MaLR 1 626 0 1710 190 7 0 chr2 212824789 212825099 -37862755 + AluJb SINE Alu 1 312 0 189 0 0 0 chr2 212825123 212825144 -37862710 + (GAAA)n Simple_repeat Simple_repeat 4 24 0 869 163 153 10 chr2 212825165 212825374 -37862480 + L1MC4a LINE L1 7308 7546 -262 236 106 12 200 chr2 212825347 212825390 -37862464 + L1MD3 LINE L1 7752 7773 -222 * 1867 158 10 3 chr2 212825390 212825687 -37862167 + AluJo SINE Alu 12 310 -2 236 106 12 200 chr2 212825687 212825728 -37862126 + L1MD3 LINE L1 7773 7820 -175 2187 95 10 3 chr2 212825976 212826270 -37861584 - AluSx SINE Alu -16 296 1 2219 79 32 0 chr2 212826297 212826577 -37861277 + AluSp SINE Alu 7 295 -18 1384 147 90 47 chr2 212826644 212826923 -37860931 + AluJb SINE Alu 2 292 -20 2252 78 10 3 chr2 212826926 212827220 -37860634 - AluY SINE Alu -15 296 1 379 141 465 0 chr2 212827221 212827320 -37860534 - MER47A DNA MER2_type -221 145 1 2191 111 0 10 chr2 212827335 212827642 -37860212 - AluSx SINE Alu -8 304 1 343 197 33 0 chr2 212827642 212827703 -37860151 - AluJ/FLAM SINE Alu -239 63 1 * 1094 176 5 5 chr2 212827703 212827890 -37859964 + MER47A DNA MER2_type 160 346 -20 189 210 0 0 chr2 212827988 212828050 -37859804 + (TA)n Simple_repeat Simple_repeat 2 63 0 331 232 43 0 chr2 212828051 212828120 -37859734 + MER21B LTR ERV1 16 87 -776 2394 241 103 32 chr2 212828145 212828884 -37858970 + MER21B LTR ERV1 19 809 -54 267 259 15 92 chr2 212830270 212830401 -37857453 - L2 LINE L2 0 3313 3193 180 290 0 43 chr2 212830515 212830584 -37857270 + L2 LINE L2 3240 3305 -8 23 0 0 0 chr2 212830599 212830622 -37857232 + AT_rich Low_complexity Low_complexity 1 23 0 483 149 0 0 chr2 212830622 212830696 -37857158 - AluJ SINE Alu -95 217 144 414 175 0 0 chr2 212830702 212830782 -37857072 + (CA)n Simple_repeat Simple_repeat 1 80 0 261 0 0 0 chr2 212830784 212830813 -37857041 + (TG)n Simple_repeat Simple_repeat 2 30 0 1569 109 70 0 chr2 212830814 212831044 -37856810 - AluSx SINE Alu -36 276 31 964 130 0 7 chr2 212831044 212831182 -37856672 - AluJ SINE Alu -175 137 1 895 102 34 0 chr2 212831305 212831423 -37856431 + AluY SINE Alu 1 122 -189 443 165 22 11 chr2 212831436 212831527 -37856327 - MIR SINE MIR -52 210 119 2069 176 10 56 chr2 212831538 212831948 -37855906 + MSTD LTR MaLR 1 391 -5 320 298 0 11 chr2 212831952 212832046 -37855808 - MIR SINE MIR -158 104 12 1195 135 0 0 chr2 212832429 212832599 -37855255 + AluSq SINE Alu 131 300 -13 2355 104 0 3 chr2 212833402 212833711 -37854143 + AluSg SINE Alu 1 308 -2 203 186 0 17 chr2 212833823 212833882 -37853972 + (TA)n Simple_repeat Simple_repeat 2 59 0 285 214 60 0 chr2 212833882 212833966 -37853888 + L1MC4 LINE L1 6614 6702 -1340 2312 101 3 3 chr2 212833966 212834274 -37853580 - AluSg SINE Alu -2 308 1 1005 144 12 12 chr2 212834274 212834434 -37853420 - FRAM SINE Alu -17 159 1 1956 103 82 24 chr2 212834715 212835006 -37852848 - AluSx SINE Alu -4 308 1 1207 139 0 0 chr2 212835024 212835197 -37852657 + AluSc SINE Alu 132 304 -5 709 158 0 30 chr2 212835272 212835405 -37852449 + FLAM_C SINE Alu 11 139 -4 2041 88 70 0 chr2 212835425 212835698 -37852156 + AluSg SINE Alu 3 294 -16 885 110 55 0 chr2 212836332 212836459 -37851395 + AluSq/x SINE Alu 3 136 -176 2248 100 3 0 chr2 212836522 212836811 -37851043 - AluSq SINE Alu -23 290 1 786 150 0 16 chr2 212837007 212837134 -37850720 - FLAM_C SINE Alu -6 137 13 2729 36 0 0 chr2 212837430 212837739 -37850115 + AluY SINE Alu 1 309 -2 22 0 0 0 chr2 212838404 212838426 -37849428 + AT_rich Low_complexity Low_complexity 1 22 0 28 91 0 0 chr2 212839733 212839810 -37848044 + GC_rich Low_complexity Low_complexity 1 77 0 222 254 0 0 chr2 212840197 212840264 -37847590 + (CGGG)n Simple_repeat Simple_repeat 1 67 0 321 26 0 0 chr2 212841203 212841241 -37846613 + (TG)n Simple_repeat Simple_repeat 2 39 0 188 184 20 0 chr2 212841263 212841312 -37846542 + (TA)n Simple_repeat Simple_repeat 2 51 0 183 80 0 0 chr2 212841592 212841617 -37846237 + (T)n Simple_repeat Simple_repeat 1 25 0 2417 78 3 0 chr2 212843158 212843453 -37844401 + AluSp SINE Alu 1 296 -17 1936 152 6 19 chr2 212843691 212844007 -37843847 - AluJb SINE Alu 0 312 1 692 219 107 29 chr2 212844269 212844474 -37843380 + MIR SINE MIR 12 232 -30 2637 43 13 0 chr2 212844547 212844852 -37843002 - AluY SINE Alu -2 309 1 225 333 0 0 chr2 212845329 212845395 -37842459 - L2 LINE L2 -80 3192 3127 1935 176 0 0 chr2 212846105 212846406 -37841448 + AluJb SINE Alu 1 301 -11 2271 96 10 0 chr2 212846520 212846813 -37841041 - AluSg1 SINE Alu -13 296 1 700 174 0 36 chr2 212846826 212846964 -37840890 - FLAM_C SINE Alu 0 133 1 2312 98 7 0 chr2 212847035 212847342 -37840512 - AluSx SINE Alu -3 309 1 243 0 0 0 chr2 212847389 212847416 -37840438 + (T)n Simple_repeat Simple_repeat 1 27 0 368 287 0 0 chr2 212847604 212847719 -37840135 - L2 LINE L2 -1304 2010 1896 1130 59 0 0 chr2 212848121 212848256 -37839598 - AluY SINE Alu -13 298 164 1842 57 0 22 chr2 212848256 212848486 -37839368 - AluY SINE Alu -86 225 1 498 255 105 56 chr2 212848501 212848721 -37839133 - MIR SINE MIR -16 246 16 183 250 0 0 chr2 212848818 212848858 -37838996 + L2 LINE L2 3258 3297 -16 637 178 39 8 chr2 212849269 212849398 -37838456 - AluJb SINE Alu -178 134 2 2230 112 7 0 chr2 212849409 212849705 -37838149 - AluSx SINE Alu -13 299 2 2161 121 0 3 chr2 212849742 212850039 -37837815 + AluSx SINE Alu 3 298 -14 914 86 0 0 chr2 212850422 212850538 -37837316 - AluSp/q SINE Alu -14 299 184 2181 103 3 0 chr2 212850538 212850820 -37837034 - AluSp SINE Alu -30 283 1 1953 93 4 4 chr2 212850888 212851146 -37836708 - AluSq SINE Alu -55 258 1 782 133 15 30 chr2 212851469 212851604 -37836250 + FLAM_C SINE Alu 1 133 0 1847 176 3 3 chr2 212851663 212851970 -37835884 + AluJb SINE Alu 1 307 -5 1725 181 27 7 chr2 212852341 212852640 -37835214 + AluJo SINE Alu 1 305 -7 2139 117 3 7 chr2 212852903 212853202 -37834652 + AluSx SINE Alu 4 301 -11 300 267 124 43 chr2 212853885 212854046 -37833808 + HAL1b LINE L1 65 238 -1110 613 179 120 0 chr2 212854057 212854220 -37833634 + FLAM_A SINE Alu 3 145 -320 2105 102 4 4 chr2 212854220 212854494 -37833360 + AluSq SINE Alu 1 274 -39 613 179 120 0 chr2 212854494 212854506 -37833348 + FLAM_A SINE Alu 145 465 0 352 226 226 29 chr2 212854582 212854719 -37833135 + HAL1b LINE L1 373 536 -812 2286 101 16 0 chr2 212854733 212855039 -37832815 - AluY SINE Alu 0 311 1 1852 152 0 48 chr2 212855040 212855349 -37832505 - AluSx SINE Alu -18 294 1 863 161 0 7 chr2 212855349 212855486 -37832368 - AluJo SINE Alu -176 136 1 252 268 56 14 chr2 212855845 212855916 -37831938 - Tigger2a DNA MER2_type 0 444 371 578 127 0 0 chr2 212855934 212856013 -37831841 - AluS SINE Alu -232 80 2 1616 135 126 16 chr2 212856018 212856336 -37831518 - Tigger2a DNA MER2_type -64 370 18 2022 150 0 3 chr2 212856477 212856783 -37831071 + AluJb SINE Alu 1 305 -7 930 217 5 26 chr2 212856869 212857058 -37830796 - MER58A DNA MER1_type -35 189 5 2047 146 3 7 chr2 212857078 212857387 -37830467 + AluJo SINE Alu 1 308 -4 555 117 0 0 chr2 212857525 212857602 -37830252 - AluSg/x SINE Alu -20 292 216 21 71 0 0 chr2 212857834 212857876 -37829978 + AT_rich Low_complexity Low_complexity 1 42 0 5978 130 31 45 chr2 212857876 212858209 -37829645 - L1MA5A LINE L1 -6 6291 5955 2202 109 13 0 chr2 212858209 212858512 -37829342 - AluSq SINE Alu -6 307 1 5978 130 31 45 chr2 212858512 212858649 -37829205 - L1MA5A LINE L1 -342 5955 5818 2193 125 3 0 chr2 212858649 212858952 -37828902 - AluSx SINE Alu -6 306 3 5978 130 31 45 chr2 212858952 212859199 -37828655 - L1MA5A LINE L1 -479 5818 5569 2036 139 13 0 chr2 212859199 212859500 -37828354 - AluSx SINE Alu -7 305 1 5978 130 31 45 chr2 212859500 212859981 -37827873 - L1MA5A LINE L1 -728 5569 5111 2281 105 3 3 chr2 212859981 212860285 -37827569 - AluSg SINE Alu -2 308 5 5978 130 31 45 chr2 212860285 212860487 -37827367 - L1MA5A LINE L1 -1186 5111 4908 594 277 33 9 chr2 212860763 212860987 -37826867 - MIR SINE MIR 0 262 36 22 80 0 0 chr2 212861462 212861512 -37826342 + AT_rich Low_complexity Low_complexity 1 50 0 2081 113 34 0 chr2 212861766 212862059 -37825795 - AluSq SINE Alu -10 303 1 213 94 0 0 chr2 212862732 212862764 -37825090 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 1785 174 11 0 chr2 212864169 212864456 -37823398 + AluJb SINE Alu 3 292 -20 632 261 48 34 chr2 212867080 212867287 -37820567 - MER63A DNA MER1_type 0 210 1 2141 142 0 0 chr2 212868024 212868333 -37819521 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 212868612 212868633 -37819221 + AT_rich Low_complexity Low_complexity 1 21 0 797 161 0 0 chr2 212868985 212869103 -37818751 + FLAM_C SINE Alu 1 118 -15 1409 257 52 29 chr2 212869125 212869924 -37817930 - L1ME3A LINE L1 -19 6151 5316 578 261 80 34 chr2 212871222 212871486 -37816368 - MARNA DNA Mariner -65 521 246 343 163 0 0 chr2 212871796 212871845 -37816009 - Tigger3(Golem) DNA MER2_type -2957 72 24 336 102 0 0 chr2 212871851 212871900 -37815954 - Tigger3(Golem) DNA MER2_type -207 2822 2774 1507 164 0 22 chr2 212871903 212872172 -37815682 + Tigger3(Golem) DNA MER2_type 2766 3028 -1 1530 112 0 0 chr2 212872921 212873136 -37814718 + AluSc SINE Alu 86 300 -9 25 90 0 0 chr2 212873688 212873755 -37814099 + AT_rich Low_complexity Low_complexity 1 67 0 420 309 52 57 chr2 212874639 212874833 -37813021 - MIR3 SINE MIR -14 194 2 1514 138 161 0 chr2 212874841 212875101 -37812753 - AluJb SINE Alu 0 302 1 1948 132 42 0 chr2 212875114 212875401 -37812453 - AluSg SINE Alu -11 299 1 276 183 0 0 chr2 212876457 212876517 -37811337 - L1ME4a LINE L1 -4 6117 6058 2034 120 0 4 chr2 212876552 212876827 -37811027 + AluSx SINE Alu 1 274 -38 2341 97 0 0 chr2 212876858 212877157 -37810697 + AluSx SINE Alu 1 299 -13 219 299 75 0 chr2 212877567 212877634 -37810220 - L2 LINE L2 -1 3312 3241 2380 77 0 3 chr2 212877855 212878155 -37809699 + AluY SINE Alu 1 299 -12 28 0 0 0 chr2 212878867 212878895 -37808959 + AT_rich Low_complexity Low_complexity 1 28 0 355 319 129 12 chr2 212879230 212879393 -37808461 - MIR3 SINE MIR -11 197 16 1792 177 3 3 chr2 212879426 212879725 -37808129 + AluJb SINE Alu 1 299 -13 23 54 0 0 chr2 212879865 212879902 -37807952 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr2 212881706 212881728 -37806126 + AT_rich Low_complexity Low_complexity 1 22 0 2426 76 0 7 chr2 212881921 212882225 -37805629 + AluSg SINE Alu 3 304 -6 21 0 0 0 chr2 212885952 212885973 -37801881 + AT_rich Low_complexity Low_complexity 1 21 0 1047 217 23 9 chr2 212886044 212886265 -37801589 - MER58A DNA MER1_type 0 224 1 587 259 14 0 chr2 212886328 212886467 -37801387 + MIR SINE MIR 106 246 -16 189 0 0 0 chr2 212886499 212886520 -37801334 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2250 110 3 0 chr2 212890993 212891294 -37796560 - AluSp SINE Alu -11 302 1 2062 96 50 0 chr2 212892319 212892599 -37795255 + AluSq SINE Alu 1 294 -19 212 226 16 16 chr2 212896462 212896524 -37791330 + CT-rich Low_complexity Low_complexity 3 64 0 24 0 0 0 chr2 212896881 212896905 -37790949 + AT_rich Low_complexity Low_complexity 1 24 0 382 329 83 72 chr2 212900276 212900638 -37787216 - L2 LINE L2 0 3272 2907 888 207 28 72 chr2 212902063 212902353 -37785501 - MER102b DNA MER1_type 0 341 65 312 242 98 23 chr2 212903113 212903245 -37784609 - L1ME4a LINE L1 -1 6120 5979 207 0 0 0 chr2 212903345 212903368 -37784486 + (TG)n Simple_repeat Simple_repeat 1 23 0 266 313 27 67 chr2 212903441 212903591 -37784263 + L2 LINE L2 2917 3060 -212 262 254 15 15 chr2 212903640 212903707 -37784147 - MIR SINE MIR -182 80 14 378 0 0 0 chr2 212903736 212903778 -37784076 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 897 144 7 0 chr2 212903778 212903917 -37783937 - FRAM SINE Alu -30 146 7 208 306 66 50 chr2 212903927 212904048 -37783806 - MIR SINE MIR -124 138 16 684 293 127 17 chr2 212904846 212905208 -37782646 - MLT1J LTR MaLR -6 505 104 770 281 82 4 chr2 212905484 212905751 -37782103 + LTR16A LTR ERVL 158 445 -5 325 368 122 12 chr2 212905925 212906343 -37781511 - L2 LINE L2 -624 2690 2227 1837 153 33 0 chr2 212908786 212909088 -37778766 - AluSq SINE Alu 0 311 1 254 297 21 62 chr2 212909728 212909873 -37777981 + L2 LINE L2 3111 3249 -64 27 29 0 0 chr2 212910785 212910819 -37777035 + AT_rich Low_complexity Low_complexity 1 34 0 774 282 37 23 chr2 212910828 212911176 -37776678 - L1ME4a LINE L1 -221 5949 5597 306 325 34 8 chr2 212911275 212911392 -37776462 - MIR3 SINE MIR -1 207 88 180 337 158 10 chr2 212912442 212912543 -37775311 - L2 LINE L2 -8 3264 3149 2211 84 9 50 chr2 212914445 212914768 -37773086 + AluSq SINE Alu 1 310 -3 2094 130 32 12 chr2 212915048 212915387 -37772467 - MER7A DNA MER2_type -2 344 1 24 32 0 0 chr2 212915431 212915462 -37772392 + AT_rich Low_complexity Low_complexity 1 31 0 477 266 101 0 chr2 212915909 212916067 -37771787 - MIR SINE MIR 0 262 89 288 269 58 0 chr2 212916139 212916243 -37771611 - MER104 DNA Tc2 -67 113 4 1767 306 124 44 chr2 212916301 212917938 -37769916 + L2 LINE L2 1184 3121 -192 1792 144 10 46 chr2 212917950 212918255 -37769599 - AluSx SINE Alu -18 294 1 36 0 0 0 chr2 212918492 212918528 -37769326 + AT_rich Low_complexity Low_complexity 1 36 0 436 208 89 0 chr2 212918541 212918642 -37769212 + L2 LINE L2 3186 3295 -18 690 180 0 0 chr2 212918930 212919069 -37768785 - L1P LINE L1 -4456 1690 1552 21 0 0 0 chr2 212921679 212921700 -37766154 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr2 212921729 212921761 -37766093 + AT_rich Low_complexity Low_complexity 1 32 0 2475 57 0 3 chr2 212923956 212924253 -37763601 + AluY SINE Alu 1 296 -15 268 328 38 46 chr2 212925087 212925218 -37762636 + MIR3 SINE MIR 76 205 -3 354 23 0 0 chr2 212925532 212925560 -37762294 + (CA)n Simple_repeat Simple_repeat 1 71 0 354 23 0 0 chr2 212925560 212925603 -37762251 + (CA)n Simple_repeat Simple_repeat 2 44 0 547 249 18 18 chr2 212926051 212926216 -37761638 + L1ME LINE L1 5621 5785 -336 25 83 0 0 chr2 212926759 212926819 -37761035 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr2 212926885 212926907 -37760947 + AT_rich Low_complexity Low_complexity 1 22 0 1293 236 34 6 chr2 212928136 212928462 -37759392 - MER58B DNA MER1_type 0 341 7 731 244 148 17 chr2 212928767 212928997 -37758857 + MIR SINE MIR 3 262 0 1064 141 42 0 chr2 212929114 212929305 -37758549 - L1MD2 LINE L1 -9 6350 6152 219 69 0 0 chr2 212929307 212929336 -37758518 + (TG)n Simple_repeat Simple_repeat 2 30 0 702 226 38 21 chr2 212930120 212930306 -37757548 - MER5A DNA MER1_type 0 189 1 564 255 187 21 chr2 212930383 212930763 -37757091 + L1ME4a LINE L1 5573 6015 -106 219 297 31 0 chr2 212931280 212931344 -37756510 + L2 LINE L2 3207 3272 0 504 279 52 12 chr2 212931640 212931812 -37756042 + L2 LINE L2 2255 2433 -881 393 255 85 0 chr2 212931817 212931923 -37755931 + L2 LINE L2 2591 2705 -609 380 206 15 0 chr2 212931950 212932018 -37755836 + L2 LINE L2 3204 3272 0 2631 149 0 23 chr2 212932150 212932592 -37755262 + Tigger2a DNA MER2_type 2 433 -1 1617 178 6 31 chr2 212932828 212933182 -37754672 - L1M4c LINE L1 -1913 4819 4475 1134 182 0 0 chr2 212933183 212933348 -37754506 - AluJo/FRAM SINE Alu -14 298 134 1782 174 0 45 chr2 212933349 212933659 -37754195 - AluJb SINE Alu -16 296 1 2727 234 37 10 chr2 212933660 212934674 -37753180 - L1M4c LINE L1 -3237 3495 2442 2325 98 3 0 chr2 212934700 212934997 -37752857 - AluSp SINE Alu -15 298 1 1166 203 16 100 chr2 212935058 212935378 -37752476 - AluJo SINE Alu -9 293 1 26 0 0 0 chr2 212935476 212935502 -37752352 + AT_rich Low_complexity Low_complexity 1 26 0 2725 260 62 8 chr2 212935563 212936672 -37751182 - L1M4c LINE L1 -4516 2137 1243 2466 58 0 10 chr2 212937100 212937409 -37750445 - AluY SINE Alu -5 306 1 243 0 0 0 chr2 212937420 212937447 -37750407 + (A)n Simple_repeat Simple_repeat 1 27 0 2361 133 2 52 chr2 212938823 212939230 -37748624 + MLT1B LTR MaLR 3 389 -1 2217 128 71 47 chr2 212939369 212939792 -37748062 + Tigger2a DNA MER2_type 2 434 0 1093 212 34 30 chr2 212939807 212940043 -37747811 + Tigger5 DNA MER2_type 2 238 -2085 * 1357 143 8 4 chr2 212940033 212940270 -37747584 + Tigger5 DNA MER2_type 2085 2322 -1 433 231 29 0 chr2 212940571 212940675 -37747179 - MIR SINE MIR 0 262 156 22 56 0 0 chr2 212941449 212941485 -37746369 + AT_rich Low_complexity Low_complexity 1 36 0 4281 197 113 34 chr2 212941772 212942310 -37745544 + Charlie1a DNA MER1_type 4 498 -2263 1890 141 0 17 chr2 212942310 212942600 -37745254 + AluJo SINE Alu 1 285 -27 4281 197 113 34 chr2 212942600 212943301 -37744553 + Charlie1a DNA MER1_type 498 1341 -114 281 198 18 45 chr2 212943303 212943441 -37744413 + (TTTA)n Simple_repeat Simple_repeat 1 134 0 403 200 11 0 chr2 212943463 212943553 -37744301 + Charlie1a DNA MER1_type 1362 1452 -3 1179 107 0 13 chr2 212944093 212944252 -37743602 - AluSg/x SINE Alu -21 289 133 321 26 0 0 chr2 212944668 212944706 -37743148 + (TG)n Simple_repeat Simple_repeat 2 39 0 1354 180 73 0 chr2 212944707 212944796 -37743058 + AluJo SINE Alu 28 109 -203 333 0 0 0 chr2 212944796 212944833 -37743021 + (CA)n Simple_repeat Simple_repeat 2 38 0 1354 180 73 0 chr2 212944833 212944988 -37742866 + AluJo SINE Alu 109 290 -22 929 266 39 36 chr2 212945007 212945464 -37742390 + L2 LINE L2 2682 3133 -180 345 47 0 0 chr2 212945624 212945667 -37742187 + (TG)n Simple_repeat Simple_repeat 2 44 0 232 338 46 60 chr2 212946370 212946521 -37741333 - L3 LINE CR1 -121 1456 1308 2237 118 24 27 chr2 212946638 212947012 -37740842 + THE1C LTR MaLR 1 373 -2 498 337 157 14 chr2 212947069 212947413 -37740441 - L3 LINE CR1 -575 1002 610 21 0 0 0 chr2 212947705 212947726 -37740128 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr2 212949972 212949998 -37737856 + (CA)n Simple_repeat Simple_repeat 2 27 0 1760 82 8 31 chr2 212950863 212951120 -37736734 - L1PA12 LINE L1 -7 6161 5911 2304 110 0 0 chr2 212951191 212951491 -37736363 - AluSg SINE Alu -10 300 1 279 0 0 0 chr2 212953051 212953082 -37734772 + (TG)n Simple_repeat Simple_repeat 2 32 0 327 261 0 22 chr2 212953082 212953174 -37734680 + L1MC4 LINE L1 6614 6703 -1339 241 189 22 0 chr2 212953186 212953276 -37734578 + (TA)n Simple_repeat Simple_repeat 2 93 0 6354 65 20 0 chr2 212953681 212954513 -37733341 + L1PA8 LINE L1 5306 6154 -18 1088 129 129 54 chr2 212954572 212954851 -37733003 + L1MA10 LINE L1 5995 6294 -40 2009 142 0 3 chr2 212954890 212955179 -37732675 - AluSx SINE Alu -20 292 5 2190 113 3 0 chr2 212955644 212955936 -37731918 + AluSx SINE Alu 1 293 -19 804 258 152 23 chr2 212956164 212956781 -37731073 + L1ME4a LINE L1 5408 6104 -17 570 195 51 0 chr2 212957860 212957978 -37729876 - MLT1B LTR MaLR 0 390 267 2505 127 3 3 chr2 212957985 212958347 -37729507 - THE1B LTR MaLR 0 364 3 350 296 45 49 chr2 212958390 212958613 -37729241 - L1MC4a LINE L1 -1866 5942 5721 347 192 176 16 chr2 212958665 212958790 -37729064 + L2 LINE L2 1529 1673 -1641 9549 103 9 5 chr2 212958800 212960294 -37727560 - L1P LINE L1 -1475 4671 3172 1849 259 19 8 chr2 212960307 212960794 -37727060 + L2 LINE L2 1947 2438 -876 567 253 124 34 chr2 212961092 212961269 -37726585 + L2 LINE L2 2639 2843 -471 2248 116 0 0 chr2 212961269 212961579 -37726275 - AluSx SINE Alu -2 310 1 567 253 124 34 chr2 212961579 212961634 -37726220 + L2 LINE L2 2843 2892 -422 388 31 0 62 chr2 212961634 212961698 -37726156 - MADE1 DNA Mariner -20 60 1 857 293 93 29 chr2 212961700 212962075 -37725779 + L2 LINE L2 2911 3309 -4 377 323 20 36 chr2 212962102 212962232 -37725622 - L1MC4a LINE L1 -2250 5558 5432 1814 144 0 58 chr2 212962232 212962545 -37725309 - AluJo SINE Alu -4 308 14 377 323 20 36 chr2 212962545 212962662 -37725192 - L1MC4a LINE L1 -2376 5432 5315 333 0 0 0 chr2 212963079 212963116 -37724738 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1612 164 0 19 chr2 212963130 212963398 -37724456 - AluJb SINE Alu -49 263 1 324 294 126 11 chr2 212965549 212965835 -37722019 - L1MC4a LINE L1 -1099 5047 4729 3010 211 10 8 chr2 212965998 212966625 -37721229 + MER82 DNA MER2_type 20 647 -6 412 344 100 37 chr2 212966662 212967122 -37720732 - L1MC4a LINE L1 -1608 4538 4050 371 221 0 47 chr2 212967572 212967658 -37720196 - MIR SINE MIR -63 145 64 198 91 0 0 chr2 212967801 212967834 -37720020 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 1165 274 89 31 chr2 212967834 212968596 -37719258 - L2 LINE L2 -13 3300 2493 182 303 93 62 chr2 212968612 212968774 -37719080 - L2 LINE L2 -50 3263 3097 201 314 111 39 chr2 212968804 212968957 -37718897 - L2 LINE L2 -434 2880 2717 2154 127 0 0 chr2 212969066 212969358 -37718496 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr2 212969525 212969547 -37718307 + AT_rich Low_complexity Low_complexity 1 22 0 1575 186 55 21 chr2 212969928 212970218 -37717636 + AluJo SINE Alu 1 300 -12 421 368 43 0 chr2 212970360 212970618 -37717236 + L1ME4a LINE L1 5560 5828 -293 21 36 0 0 chr2 212970741 212970769 -37717085 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 212972162 212972184 -37715670 + AT_rich Low_complexity Low_complexity 1 22 0 325 248 85 7 chr2 212973146 212973287 -37714567 + MER102a DNA MER1_type 40 191 -139 467 340 7 0 chr2 212973721 212973871 -37713983 + MER102a DNA MER1_type 179 329 -1 739 261 75 33 chr2 212974423 212974664 -37713190 - MIR SINE MIR 0 262 12 239 232 0 18 chr2 212974792 212974848 -37713006 + L2 LINE L2 3254 3308 -5 239 216 26 122 chr2 212975512 212975658 -37712196 - MIR SINE MIR -5 203 79 229 284 54 14 chr2 212975789 212975863 -37711991 + MIR SINE MIR 66 142 -66 267 332 242 14 chr2 212976818 212977029 -37710825 + MIR SINE MIR 2 260 -2 1561 178 29 7 chr2 212977088 212977401 -37710453 + AluJo SINE Alu 1 319 0 210 222 0 0 chr2 212978355 212978391 -37709463 + G-rich Low_complexity Low_complexity 1 36 0 197 250 67 17 chr2 212978443 212978503 -37709351 + MIR SINE MIR 96 158 -104 3563 60 2 0 chr2 212978537 212978991 -37708863 - L1PA8 LINE L1 -7 6165 5711 607 92 25 92 chr2 212979002 212979121 -37708733 - HY1 scRNA scRNA -1 111 1 2910 178 30 13 chr2 212979236 212979864 -37707990 + L1MA9 LINE L1 5652 6290 -22 235 268 10 72 chr2 212979875 212979972 -37707882 - MIR SINE MIR -81 127 37 199 129 129 100 chr2 212980622 212980692 -37707162 + MIR3 SINE MIR 123 194 -14 238 342 13 0 chr2 212982037 212982116 -37705738 - L2 LINE L2 0 3313 3234 235 306 102 25 chr2 212982174 212982331 -37705523 - L2 LINE L2 -209 3063 2895 344 63 11 168 chr2 212982455 212982550 -37705304 + LTR37A LTR ERV1 81 160 -266 2236 109 0 3 chr2 212983040 212983333 -37704521 - AluSp SINE Alu -21 292 1 21 0 0 0 chr2 212983586 212983607 -37704247 + AT_rich Low_complexity Low_complexity 1 21 0 360 237 172 0 chr2 212984014 212984107 -37703747 - L2 LINE L2 -3 3310 3202 26 0 0 0 chr2 212984419 212984445 -37703409 + AT_rich Low_complexity Low_complexity 1 26 0 318 244 24 49 chr2 212984450 212984573 -37703281 + L1ME4a LINE L1 5964 6083 -38 1803 140 0 4 chr2 212987101 212987379 -37700475 + AluSx SINE Alu 1 277 -35 279 54 0 0 chr2 212987384 212987421 -37700433 + (CA)n Simple_repeat Simple_repeat 2 38 0 189 0 0 0 chr2 212987877 212987898 -37699956 + (GAAAA)n Simple_repeat Simple_repeat 5 25 0 23 0 0 0 chr2 212988205 212988228 -37699626 + AT_rich Low_complexity Low_complexity 1 23 0 260 254 45 15 chr2 212988595 212988662 -37699192 - MIR3 SINE MIR -28 180 112 489 260 0 24 chr2 212988930 212989057 -37698797 - L2 LINE L2 0 3313 3190 366 186 93 47 chr2 212989063 212989192 -37698662 + L1ME4a LINE L1 5987 6121 0 208 320 174 11 chr2 212989286 212989464 -37698390 + MIR SINE MIR 6 212 -50 202 229 0 0 chr2 212989470 212989518 -37698336 + T-rich Low_complexity Low_complexity 1 48 0 1814 47 0 9 chr2 212989520 212989753 -37698101 - L1PA4 LINE L1 0 6155 5925 399 255 51 87 chr2 212990038 212990234 -37697620 + MER5A DNA MER1_type 1 189 0 296 358 65 35 chr2 212990276 212990586 -37697268 - L2 LINE L2 -1409 1905 1587 392 301 88 58 chr2 212990629 212990994 -37696860 + MLT1K LTR MaLR 67 442 -146 1282 124 36 0 chr2 212991047 212991272 -37696582 - L1MA8 LINE L1 -2 6289 6057 2450 57 14 0 chr2 212992133 212992430 -37695424 - AluY SINE Alu -3 308 8 2333 99 0 0 chr2 212993743 212994070 -37693784 + AluSc SINE Alu 1 309 0 315 0 0 0 chr2 212994979 212995014 -37692840 + (CA)n Simple_repeat Simple_repeat 2 36 0 790 162 132 0 chr2 212995285 212995452 -37692402 + MER5A DNA MER1_type 1 189 0 219 186 0 0 chr2 212996672 212996715 -37691139 + (TA)n Simple_repeat Simple_repeat 2 44 0 7429 123 22 41 chr2 212996809 212997108 -37690746 + HSMAR2 DNA Mariner 12 315 -987 2655 89 22 5 chr2 212997108 212997478 -37690376 + L1PA10 LINE L1 5788 6163 -5 7429 123 22 41 chr2 212997478 212998490 -37689364 + HSMAR2 DNA Mariner 315 1298 -4 1871 135 11 7 chr2 212998805 212999125 -37688729 + AluSx SINE Alu 1 321 0 2019 127 25 0 chr2 213000058 213000380 -37687474 + THE1B LTR MaLR 2 331 -33 357 356 97 14 chr2 213002000 213002216 -37685638 + L1 LINE L1 3692 3925 -2221 5572 146 15 9 chr2 213002236 213002280 -37685574 - L1MA8 LINE L1 -6 6285 6243 1844 148 7 20 chr2 213002280 213002577 -37685277 - AluJo SINE Alu -13 299 7 5572 146 15 9 chr2 213002577 213003786 -37684068 - L1MA8 LINE L1 -48 6243 5023 245 278 28 0 chr2 213003963 213004035 -37683819 + L2 LINE L2 1876 1949 -1365 1837 219 61 55 chr2 213004052 213004740 -37683114 - L1MC4 LINE L1 -2 8040 7349 879 258 53 54 chr2 213004730 213005151 -37682703 - L1MC4 LINE L1 -974 6834 6444 * 894 326 98 42 chr2 213005171 213005655 -37682199 + L2 LINE L2 1987 2519 -795 1809 174 0 23 chr2 213005655 213005965 -37681889 + AluSx SINE Alu 1 303 -9 894 326 98 42 chr2 213005965 213006131 -37681723 + L2 LINE L2 2519 2674 -640 644 278 129 58 chr2 213006200 213006650 -37681204 + L2 LINE L2 2832 3313 0 1027 266 38 65 chr2 213007323 213007928 -37679926 - L2 LINE L2 -15 3298 2704 207 0 0 0 chr2 213007928 213007951 -37679903 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 993 77 0 0 chr2 213008408 213008538 -37679316 - L1PA8 LINE L1 -7 6165 6036 7355 106 22 2 chr2 213008538 213009683 -37678171 + L1P LINE L1 3810 4977 -1169 1911 190 46 12 chr2 213009716 213010127 -37677727 - MSTB1 LTR MaLR 0 432 8 1871 279 69 27 chr2 213010127 213010820 -37677034 - L2 LINE L2 -621 2693 1972 1637 146 35 107 chr2 213010820 213010889 -37676965 + MLT1A1 LTR MaLR 1 73 -301 2359 151 56 2 chr2 213010889 213011299 -37676555 - MSTB1 LTR MaLR 0 432 1 1637 146 35 107 chr2 213011299 213011632 -37676222 + MLT1A1 LTR MaLR 73 374 0 403 211 0 61 chr2 213011632 213011746 -37676108 - L2 LINE L2 -1338 1976 1870 975 181 5 70 chr2 213012365 213012510 -37675344 + MER5A DNA MER1_type 1 131 -58 2205 134 0 0 chr2 213012510 213012817 -37675037 - AluSx SINE Alu -5 307 1 975 181 5 70 chr2 213012817 213012870 -37674984 + MER5A DNA MER1_type 131 186 -3 1660 189 3 30 chr2 213012990 213013291 -37674563 + AluJo SINE Alu 1 293 -19 388 279 123 64 chr2 213013410 213013818 -37674036 - MLT1L LTR MaLR -19 596 165 238 284 14 0 chr2 213013859 213013933 -37673921 - MLT1L LTR MaLR -540 75 1 2306 115 22 25 chr2 213014229 213014594 -37673260 - THE1B LTR MaLR 0 364 1 1655 190 14 3 chr2 213017069 213017359 -37670495 + AluJb SINE Alu 1 293 -19 2603 134 25 30 chr2 213018064 213018498 -37669356 - Tigger2a DNA MER2_type 0 434 3 356 248 16 40 chr2 213019118 213019243 -37668611 + MER112 DNA MER1_type 1 122 -138 3106 89 20 11 chr2 213019250 213019690 -37668164 + MLT2A1 LTR ERVL 1 444 0 8199 64 12 17 chr2 213019690 213020647 -37667207 + HERVL-A1 LTR ERVL 1 954 -4700 2388 82 16 13 chr2 213020647 213020950 -37666904 - AluY SINE Alu -7 304 1 8199 64 12 17 chr2 213020950 213021113 -37666741 + HERVL-A1 LTR ERVL 954 1116 -4538 874 335 80 15 chr2 213021117 213021645 -37666209 + L2 LINE L2 1839 2400 -914 363 304 61 0 chr2 213022206 213022321 -37665533 + L2 LINE L2 3151 3272 0 2003 137 0 0 chr2 213022580 213022858 -37664996 + AluSg SINE Alu 1 278 -32 252 0 0 0 chr2 213022858 213022886 -37664968 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 1447 208 50 28 chr2 213022896 213023319 -37664535 + MLT1C LTR MaLR 34 465 -2 2326 99 20 0 chr2 213023660 213023962 -37663892 - AluSp SINE Alu -4 309 2 21 36 0 0 chr2 213024100 213024128 -37663726 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr2 213025101 213025124 -37662730 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2099 121 0 3 chr2 213026034 213026331 -37661523 + AluSc SINE Alu 1 296 -13 279 342 167 18 chr2 213026479 213026821 -37661033 + L2 LINE L2 2921 3313 0 1760 136 86 21 chr2 213027496 213027835 -37660019 - MER46B DNA MER2_type 0 236 1 406 250 35 62 chr2 213028168 213028312 -37659542 - MIR SINE MIR -17 245 106 271 246 18 0 chr2 213028307 213028364 -37659490 + MIR SINE MIR 97 154 -108 * 303 313 12 0 chr2 213028381 213028461 -37659393 - MIR SINE MIR -168 94 14 21 57 0 0 chr2 213029033 213029068 -37658786 + AT_rich Low_complexity Low_complexity 1 35 0 245 207 0 17 chr2 213029329 213029387 -37658467 + GA-rich Low_complexity Low_complexity 1 57 0 193 154 92 62 chr2 213029449 213029514 -37658340 + MIR SINE MIR 93 159 -103 292 265 153 46 chr2 213029526 213029722 -37658132 - L2 LINE L2 -6 3307 3091 24 32 0 0 chr2 213029777 213029808 -37658046 + AT_rich Low_complexity Low_complexity 1 31 0 235 193 0 35 chr2 213030027 213030084 -37657770 - MLT1L LTR MaLR -221 394 340 989 283 44 65 chr2 213030746 213031235 -37656619 + MLT1K LTR MaLR 53 532 -56 719 185 48 7 chr2 213031235 213031381 -37656473 - FRAM SINE Alu -13 153 2 989 283 44 65 chr2 213031381 213031431 -37656423 + MLT1K LTR MaLR 532 581 -7 791 224 22 22 chr2 213032421 213032600 -37655254 - MIR SINE MIR -21 241 63 25 65 0 0 chr2 213032696 213032742 -37655112 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr2 213034201 213034236 -37653618 + AT_rich Low_complexity Low_complexity 1 35 0 266 167 0 15 chr2 213034308 213034374 -37653480 + GA-rich Low_complexity Low_complexity 1 65 0 252 271 0 0 chr2 213034662 213034721 -37653133 + (CATATA)n Simple_repeat Simple_repeat 6 64 0 1168 304 66 21 chr2 213036059 213036420 -37651434 + HERV16 LTR ERVL 787 1181 -3815 2251 117 0 0 chr2 213036420 213036727 -37651127 + AluSq SINE Alu 2 308 -5 1168 304 66 21 chr2 213036727 213036895 -37650959 + HERV16 LTR ERVL 1181 1340 -3656 3964 99 0 0 chr2 213036911 213037474 -37650380 - L1PA13 LINE L1 0 6163 5601 1169 107 0 0 chr2 213037475 213037652 -37650202 - L1PA13 LINE L1 -612 5551 5375 1078 300 64 44 chr2 213038058 213038494 -37649360 + LTR16A LTR ERVL 1 437 -13 279 323 191 27 chr2 213039335 213039539 -37648315 - L2 LINE L2 -788 2526 2357 366 80 0 0 chr2 213039539 213039589 -37648265 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 279 323 191 27 chr2 213039589 213039678 -37648176 - L2 LINE L2 -957 2357 2185 1836 331 87 60 chr2 213039802 213041627 -37646227 + L2 LINE L2 1006 2880 -434 2009 155 3 0 chr2 213041952 213042248 -37645606 + AluJb SINE Alu 1 297 -15 328 352 158 0 chr2 213042268 213042464 -37645390 - L2 LINE L2 -1333 1981 1755 276 403 28 20 chr2 213042474 213042722 -37645132 + L2 LINE L2 2608 2857 -457 253 307 88 0 chr2 213042958 213043072 -37644782 + L2 LINE L2 3186 3309 -4 2306 78 51 0 chr2 213043928 213044221 -37643633 + AluSx SINE Alu 1 308 -4 322 324 72 14 chr2 213045789 213045928 -37641926 - L2 LINE L2 -280 2992 2846 483 305 68 21 chr2 213045970 213046206 -37641648 - L2 LINE L2 -438 2876 2630 2013 130 3 0 chr2 213046354 213046639 -37641215 + AluJb SINE Alu 1 286 -26 22 0 0 0 chr2 213046639 213046661 -37641193 + AT_rich Low_complexity Low_complexity 1 22 0 181 355 21 21 chr2 213047233 213047326 -37640528 + MIR SINE MIR 47 139 -69 2306 59 45 0 chr2 213048397 213048683 -37639171 + AluY SINE Alu 1 299 -12 340 279 36 27 chr2 213048983 213049094 -37638760 + MIR3 SINE MIR 91 202 -6 214 186 0 0 chr2 213049371 213049414 -37638440 + (TA)n Simple_repeat Simple_repeat 2 44 0 1239 141 95 125 chr2 213049469 213049773 -37638081 + AluJo SINE Alu 1 295 -17 1168 193 0 0 chr2 213050441 213050648 -37637206 + Tigger5 DNA MER2_type 7 213 -2110 1371 133 9 4 chr2 213050656 213050889 -37636965 + Tigger5 DNA MER2_type 2090 2323 0 2395 92 0 3 chr2 213050968 213051273 -37636581 + AluSq SINE Alu 1 304 -9 264 226 122 9 chr2 213052348 213052463 -37635391 - L1ME3A LINE L1 0 6170 6043 2817 153 50 36 chr2 213052679 213053240 -37634614 - L1MB1 LINE L1 0 6168 5600 2212 144 0 52 chr2 213053253 213053698 -37634156 - L1MB1 LINE L1 -2215 3931 3510 1780 114 42 33 chr2 213053704 213054037 -37633817 - L1M3 LINE L1 -552 5680 5345 26 0 0 0 chr2 213054063 213054089 -37633765 + AT_rich Low_complexity Low_complexity 1 26 0 10658 210 114 22 chr2 213054170 213056607 -37631247 - L1M3 LINE L1 -856 5354 3145 1715 113 158 0 chr2 213056607 213056898 -37630956 + MER1B DNA MER1_type 1 337 0 10658 210 114 22 chr2 213056898 213057299 -37630555 - L1M3 LINE L1 -3065 3145 2783 1749 158 72 31 chr2 213057299 213057659 -37630195 - THE1C LTR MaLR 0 375 1 10658 210 114 22 chr2 213057659 213059238 -37628616 - L1M3 LINE L1 -3427 2783 624 2488 80 0 3 chr2 213059240 213059551 -37628303 - AluSq SINE Alu -3 310 1 207 114 0 0 chr2 213059591 213059626 -37628228 + (T)n Simple_repeat Simple_repeat 1 35 0 294 255 55 34 chr2 213059828 213059971 -37627883 - L1M3de LINE L1 -5240 1423 1254 568 343 59 21 chr2 213059979 213060367 -37627487 - L1M3 LINE L1 -5712 429 27 1030 236 31 9 chr2 213060589 213060814 -37627040 + MIR SINE MIR 7 236 -26 195 355 132 25 chr2 213061258 213061379 -37626475 + L2 LINE L2 3122 3255 -17 1225 161 14 18 chr2 213061747 213061965 -37625889 + MER20 DNA MER1_type 2 218 -1 180 350 146 10 chr2 213062742 213062845 -37625009 - L2 LINE L2 -37 3235 3119 2146 133 40 14 chr2 213062876 213063229 -37624625 - THE1B LTR MaLR -2 362 1 332 333 86 28 chr2 213063281 213063536 -37624318 - L2 LINE L2 -189 3083 2814 206 306 28 46 chr2 213064030 213064138 -37623716 + MIR SINE MIR 31 136 -126 640 274 53 18 chr2 213064274 213064500 -37623354 + MIR SINE MIR 3 236 -26 431 313 174 0 chr2 213065500 213065644 -37622210 + MIR3 SINE MIR 3 171 -37 28 71 0 0 chr2 213065768 213065824 -37622030 + AT_rich Low_complexity Low_complexity 1 56 0 245 289 0 105 chr2 213066218 213066332 -37621522 + MIR SINE MIR 158 259 -3 1825 169 13 7 chr2 213066387 213066695 -37621159 + AluJb SINE Alu 1 310 -2 208 286 186 0 chr2 213070528 213070598 -37617256 - L2 LINE L2 -35 3237 3155 230 244 125 74 chr2 213070663 213070839 -37617015 - MIR SINE MIR -25 237 53 2200 110 7 3 chr2 213070878 213071186 -37616668 + AluSc SINE Alu 1 309 0 339 292 0 22 chr2 213071248 213071337 -37616517 - MIR3 SINE MIR -11 197 111 241 325 12 0 chr2 213071414 213071497 -37616357 + MIR SINE MIR 41 124 -84 396 265 114 38 chr2 213071739 213071950 -37615904 + L1ME LINE L1 5353 5579 -542 671 204 25 52 chr2 213071977 213072170 -37615684 - L1MA10 LINE L1 -5 6161 5962 24 0 0 0 chr2 213072322 213072346 -37615508 + AT_rich Low_complexity Low_complexity 1 24 0 730 196 0 53 chr2 213072346 213072479 -37615375 - FLAM_A SINE Alu -7 126 1 2203 92 3 3 chr2 213073175 213073468 -37614386 - AluY SINE Alu -18 293 1 238 337 22 11 chr2 213073544 213073636 -37614218 + LTR67 LTR ERVL 97 189 -368 1910 166 3 10 chr2 213074160 213074468 -37613386 + AluJb SINE Alu 1 306 -6 2458 83 0 0 chr2 213074852 213075154 -37612700 + AluY SINE Alu 1 302 -9 21 0 0 0 chr2 213075160 213075181 -37612673 + AT_rich Low_complexity Low_complexity 1 21 0 2025 156 22 6 chr2 213075935 213076293 -37611561 - L1MB3 LINE L1 0 6183 5820 690 156 63 14 chr2 213076299 213076492 -37611362 + AluJ SINE Alu 34 299 -13 493 122 82 20 chr2 213076492 213076590 -37611264 - L1MB3 LINE L1 -356 5827 5724 450 0 0 0 chr2 213076595 213076645 -37611209 + (TG)n Simple_repeat Simple_repeat 2 51 0 303 198 55 66 chr2 213076833 213076924 -37610930 - MARNA DNA Mariner -228 358 269 744 269 25 29 chr2 213076927 213077172 -37610682 - MIR SINE MIR 0 262 19 566 266 48 108 chr2 213077358 213077730 -37610124 - MER34 LTR ERV1 -29 513 164 444 270 92 7 chr2 213077937 213078089 -37609765 - MARNA DNA Mariner -352 234 70 333 256 94 17 chr2 213078192 213078309 -37609545 + MIR SINE MIR 77 202 -60 245 211 178 33 chr2 213079628 213079718 -37608136 - MIR SINE MIR -19 243 141 342 304 58 16 chr2 213079968 213080119 -37607735 - MIR SINE MIR -65 197 35 509 0 16 0 chr2 213082218 213082279 -37605575 + (TG)n Simple_repeat Simple_repeat 2 63 0 766 264 81 33 chr2 213082713 213082986 -37604868 - MARNA DNA Mariner -211 375 90 233 250 36 0 chr2 213083075 213083131 -37604723 - MIR SINE MIR -93 169 112 196 286 41 0 chr2 213083117 213083166 -37604688 + MIR SINE MIR 57 107 -155 * 354 273 51 80 chr2 213083392 213083488 -37604366 + MIR3 SINE MIR 2 92 -116 1827 153 21 7 chr2 213083488 213083776 -37604078 + AluJb SINE Alu 19 310 -2 354 273 51 80 chr2 213083776 213083855 -37603999 + MIR3 SINE MIR 92 172 -36 1626 67 5 19 chr2 213084564 213084773 -37603081 - AluSp SINE Alu -15 298 93 3561 62 4 9 chr2 213084775 213085225 -37602629 - LTR7 LTR ERV1 -2 448 1 2589 76 45 13 chr2 213085225 213085605 -37602249 - HERVH LTR ERV1 0 7713 7322 1293 129 22 44 chr2 213085603 213085828 -37602026 - HERVH LTR ERV1 -1894 5819 5600 * 4356 143 9 1 chr2 213085829 213086486 -37601368 - HERVH LTR ERV1 -2564 5149 4488 3402 115 2 6 chr2 213086488 213086992 -37600862 - HERVH LTR ERV1 -3720 3993 3492 989 120 7 0 chr2 213086982 213087132 -37600722 - HERVH LTR ERV1 -4423 3290 3140 * 21038 88 13 15 chr2 213087111 213090110 -37597744 - HERVH LTR ERV1 -4718 2995 1 3677 58 0 7 chr2 213090112 213090563 -37597291 - LTR7 LTR ERV1 -2 448 1 723 61 0 0 chr2 213090563 213090645 -37597209 - AluSp SINE Alu -215 97 16 336 314 51 51 chr2 213091747 213091903 -37595951 - MIR SINE MIR -56 206 51 222 32 129 0 chr2 213092216 213092278 -37595576 + T-rich Low_complexity Low_complexity 2 71 0 21 0 0 0 chr2 213092902 213092923 -37594931 + AT_rich Low_complexity Low_complexity 1 21 0 462 301 69 30 chr2 213093348 213093551 -37594303 + MIR SINE MIR 20 230 -32 1713 185 60 30 chr2 213093552 213093962 -37593892 - MLT1D LTR MaLR 0 505 88 2268 244 31 7 chr2 213093967 213094570 -37593284 - L1M4 LINE L1 -1474 4672 4055 416 174 50 110 chr2 213094571 213094698 -37593156 - MLT1D LTR MaLR -396 109 3 2121 51 0 16 chr2 213095069 213095325 -37592529 + AluY SINE Alu 1 252 -59 21 0 0 0 chr2 213095325 213095346 -37592508 + AT_rich Low_complexity Low_complexity 1 21 0 271 342 204 5 chr2 213095539 213095735 -37592119 + L3b LINE CR1 1293 1527 -56 600 210 58 103 chr2 213097059 213097133 -37590721 + MIR SINE MIR 31 107 -155 708 195 31 8 chr2 213097133 213097261 -37590593 + MER94 DNA DNA 2 132 -2 600 210 58 103 chr2 213097261 213097429 -37590425 + MIR SINE MIR 107 262 0 189 227 0 23 chr2 213098295 213098339 -37589515 - L2 LINE L2 -4 3309 3267 350 291 174 55 chr2 213098378 213098797 -37589057 + MLT1H LTR MaLR 1 469 -80 235 278 49 93 chr2 213099124 213099286 -37588568 - L2 LINE L2 0 3313 3159 328 318 127 40 chr2 213099698 213099871 -37587983 + MIR3 SINE MIR 6 193 -15 464 235 135 16 chr2 213100055 213100223 -37587631 + MIR SINE MIR 20 205 -57 246 287 85 23 chr2 213100515 213100644 -37587210 + MLT1J LTR MaLR 11 147 -364 605 238 104 36 chr2 213100737 213100930 -37586924 + MLT1J LTR MaLR 305 510 -1 258 318 103 72 chr2 213101132 213101497 -37586357 - L2 LINE L2 -188 3084 2732 270 0 0 0 chr2 213101497 213101527 -37586327 + (TA)n Simple_repeat Simple_repeat 2 31 0 1830 30 0 0 chr2 213101528 213101731 -37586123 - L1PA5 LINE L1 0 6154 5952 258 318 103 72 chr2 213101731 213101981 -37585873 - L2 LINE L2 -539 2733 2410 713 247 154 78 chr2 213103154 213103627 -37584227 - MLT1J LTR MaLR -2 509 1 1767 125 7 63 chr2 213104468 213104771 -37583083 - AluJb SINE Alu -25 287 2 180 0 0 0 chr2 213104822 213104842 -37583012 + (T)n Simple_repeat Simple_repeat 1 20 0 280 287 89 20 chr2 213104858 213104959 -37582895 + L2 LINE L2 3138 3245 -27 763 332 194 28 chr2 213105291 213106458 -37581396 + L2 LINE L2 1618 2977 -337 265 314 10 20 chr2 213106481 213106583 -37581271 - L2 LINE L2 -1 3312 3212 636 189 41 0 chr2 213106931 213107053 -37580801 + L1MB1 LINE L1 6013 6139 -50 2601 65 10 0 chr2 213107066 213107374 -37580480 - AluY SINE Alu 0 311 1 1130 265 91 58 chr2 213107515 213108085 -37579769 - L2 LINE L2 -691 2623 2035 1099 204 0 26 chr2 213108121 213108352 -37579502 + AluJo SINE Alu 86 310 -2 395 171 0 12 chr2 213108352 213108434 -37579420 + GA-rich Low_complexity Low_complexity 2 82 0 913 94 31 0 chr2 213108886 213109014 -37578840 - L1MA9 LINE L1 -5 6307 6176 435 161 46 0 chr2 213109017 213109104 -37578750 + L1M3 LINE L1 5664 5754 -580 316 253 28 67 chr2 213111239 213111429 -37576425 - MER5B DNA MER1_type 0 178 1 496 311 115 20 chr2 213111454 213111864 -37575990 - LTR16A LTR ERVL 0 450 1 2611 318 82 21 chr2 213112002 213113405 -37574449 - HERV16 LTR ERVL -3435 1561 4 819 276 86 42 chr2 213113443 213113802 -37574052 - LTR16A LTR ERVL -75 375 1 292 176 22 42 chr2 213114240 213114337 -37573517 - HsTC2 DNA Tc2 -63 1835 21 306 172 0 16 chr2 213115042 213115106 -37572748 - L1ME4a LINE L1 0 6121 6059 234 0 0 0 chr2 213115216 213115242 -37572612 + (CA)n Simple_repeat Simple_repeat 2 27 0 234 204 0 0 chr2 213116604 213116648 -37571206 - L1MC4 LINE L1 -72 7970 7927 5371 113 22 22 chr2 213116729 213118008 -37569846 - L1PA13 LINE L1 0 6163 4870 313 258 0 40 chr2 213118268 213118392 -37569462 - L1ME LINE L1 -321 5800 5682 543 304 124 33 chr2 213118393 213118844 -37569010 - L1ME LINE L1 -795 5351 4860 232 204 148 0 chr2 213118920 213119008 -37568846 + MLT1J LTR MaLR 100 200 -311 551 300 55 6 chr2 213119253 213119583 -37568271 - L1ME LINE L1 -1310 4836 4491 585 183 17 8 chr2 213119857 213119977 -37567877 + MER20 DNA MER1_type 1 121 -98 539 174 0 18 chr2 213120015 213120124 -37567730 - FRAM SINE Alu -5 171 65 925 281 94 22 chr2 213120400 213120901 -37566953 - L1ME4a LINE L1 -304 5866 5330 1410 197 0 19 chr2 213120902 213121171 -37566683 - AluJo SINE Alu -7 305 42 236 289 70 0 chr2 213121199 213121327 -37566527 - L1ME4a LINE L1 -831 5315 5179 693 287 45 31 chr2 213121453 213121875 -37565979 - L1ME4a LINE L1 -1183 4963 4536 27 73 0 0 chr2 213121889 213121944 -37565910 + AT_rich Low_complexity Low_complexity 1 55 0 374 270 25 51 chr2 213122453 213122690 -37565164 - L1MC4 LINE L1 -29 8013 7783 2432 82 0 0 chr2 213123386 213123689 -37564165 + AluSg SINE Alu 1 303 -7 902 263 23 0 chr2 213124050 213124267 -37563587 + MIR SINE MIR 7 228 -34 487 278 126 46 chr2 213124304 213124696 -37563158 + L2 LINE L2 2645 3069 -203 228 167 24 0 chr2 213124974 213125016 -37562838 - MER5A DNA MER1_type -61 128 86 * 633 284 61 38 chr2 213124994 213125408 -37562446 - L2 LINE L2 -244 3069 2649 837 172 0 8 chr2 213126662 213126796 -37561058 + FLAM_C SINE Alu 1 133 -10 241 261 60 121 chr2 213127008 213127257 -37560597 + L2 LINE L2 3039 3272 0 2296 136 6 9 chr2 213127684 213128022 -37559832 - MER1B DNA MER1_type 0 337 1 209 342 108 18 chr2 213128022 213128133 -37559721 + L2 LINE L2 3122 3242 -71 225 0 0 0 chr2 213128266 213128291 -37559563 + (A)n Simple_repeat Simple_repeat 1 25 0 195 283 141 33 chr2 213128319 213128411 -37559443 - MIR SINE MIR -67 141 40 488 293 58 33 chr2 213129200 213129442 -37558412 + MER112 DNA MER1_type 1 248 -12 1784 266 67 2 chr2 213129455 213129966 -37557888 - MLT1H1 LTR MaLR 0 555 12 629 231 64 44 chr2 213130103 213130354 -37557500 + MER112 DNA MER1_type 1 256 0 3368 113 8 14 chr2 213131116 213131620 -37556234 + MER1A DNA MER1_type 29 529 0 1336 213 31 12 chr2 213132065 213132385 -37555469 - MER58B DNA MER1_type -15 326 1 23 33 0 0 chr2 213132709 213132739 -37555115 + AT_rich Low_complexity Low_complexity 1 30 0 2777 109 60 10 chr2 213132752 213133236 -37554618 + L1MB3 LINE L1 5675 6182 -1 233 248 248 0 chr2 213133435 213133540 -37554314 - MIR SINE MIR -120 142 12 409 255 69 62 chr2 213133871 213134016 -37553838 + L2 LINE L2 3127 3272 0 192 179 0 0 chr2 213134497 213134536 -37553318 + CT-rich Low_complexity Low_complexity 3 41 0 221 289 10 41 chr2 213134918 213135015 -37552839 - MIR SINE MIR 0 262 169 640 244 66 36 chr2 213135148 213135361 -37552493 + MIR SINE MIR 45 261 -1 321 333 0 18 chr2 213135362 213135476 -37552378 - MIR SINE MIR -138 124 13 2035 147 44 33 chr2 213136204 213136564 -37551290 + THE1B LTR MaLR 1 364 0 2334 132 25 59 chr2 213137960 213138158 -37549696 + MSTC LTR MaLR 1 204 -224 4669 70 8 2 chr2 213138158 213138761 -37549093 - L1PA10 LINE L1 -13 6155 5549 2334 132 25 59 chr2 213138761 213139003 -37548851 + MSTC LTR MaLR 204 426 -2 185 310 0 42 chr2 213139286 213139357 -37548497 + L2 LINE L2 2997 3064 -208 252 0 0 0 chr2 213139604 213139632 -37548222 + (TA)n Simple_repeat Simple_repeat 2 29 0 2624 30 0 3 chr2 213142418 213142719 -37545135 + AluY SINE Alu 2 301 -10 1955 110 46 3 chr2 213142956 213143086 -37544768 + AluSq SINE Alu 1 124 -189 189 0 0 0 chr2 213143086 213143107 -37544747 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1955 110 46 3 chr2 213143107 213143258 -37544596 + AluSq SINE Alu 124 294 -19 422 358 73 0 chr2 213143665 213143844 -37544010 + MIR SINE MIR 58 249 -13 196 304 13 51 chr2 213144036 213144115 -37543739 + L2 LINE L2 3234 3309 -4 213 162 44 88 chr2 213145021 213145089 -37542765 - MER5B DNA MER1_type -17 161 97 393 252 84 25 chr2 213145444 213145563 -37542291 + MIR3 SINE MIR 14 139 -69 940 306 84 18 chr2 213145740 213146178 -37541676 + MLT1K LTR MaLR 122 588 0 257 209 162 38 chr2 213146181 213146286 -37541568 - MIR SINE MIR -61 147 30 456 323 40 10 chr2 213147764 213147962 -37539892 - MIR SINE MIR -54 208 5 418 70 0 0 chr2 213147983 213148040 -37539814 + L1PA10 LINE L1 6099 6155 -13 445 240 206 0 chr2 213148066 213148212 -37539642 - MIR SINE MIR -27 235 60 193 346 39 29 chr2 213148224 213148328 -37539526 - L2 LINE L2 0 3272 3168 397 318 20 7 chr2 213149331 213149479 -37538375 + MIR SINE MIR 70 219 -43 2205 150 5 38 chr2 213149535 213149934 -37537920 + MSTC LTR MaLR 1 386 -42 2303 88 3 28 chr2 213150472 213150790 -37537064 + AluSp SINE Alu 1 310 -3 465 241 253 20 chr2 213152246 213152499 -37535355 + MER102a DNA MER1_type 5 316 -14 230 229 0 0 chr2 213153009 213153057 -37534797 - L2 LINE L2 -73 3240 3193 279 290 115 35 chr2 213153177 213153463 -37534391 + L1ME4a LINE L1 5354 5662 -459 324 382 58 0 chr2 213153733 213153940 -37533914 + L1ME4a LINE L1 5708 5926 -195 407 238 81 41 chr2 213154249 213154421 -37533433 + MIR3 SINE MIR 30 208 0 1785 64 27 0 chr2 213155235 213155454 -37532400 + AluY SINE Alu 1 225 -86 346 343 39 24 chr2 213156279 213156486 -37531368 + MIR SINE MIR 42 251 -11 2082 118 0 51 chr2 213156514 213156828 -37531026 - AluSx SINE Alu -14 298 1 5527 189 46 17 chr2 213156951 213157414 -37530440 - L1MA9 LINE L1 -38 6274 5826 264 59 0 0 chr2 213157414 213157448 -37530406 + (TG)n Simple_repeat Simple_repeat 2 35 0 5527 189 46 17 chr2 213157448 213159150 -37528704 - L1MA9 LINE L1 -486 5826 4048 220 398 37 6 chr2 213159155 213159316 -37528538 + MIR SINE MIR 58 223 -39 26 0 0 0 chr2 213161356 213161382 -37526472 + AT_rich Low_complexity Low_complexity 1 26 0 246 240 29 99 chr2 213161525 213161670 -37526184 - MIR SINE MIR -65 143 16 1936 112 3 21 chr2 213162085 213162371 -37525483 + AluSx SINE Alu 1 281 -31 213 39 0 0 chr2 213162374 213162400 -37525454 + (TAA)n Simple_repeat Simple_repeat 2 27 0 277 221 44 0 chr2 213162536 213162604 -37525250 + LTR50 LTR ERVL 725 795 0 296 202 173 29 chr2 213163245 213163349 -37524505 + L2 LINE L2 3180 3298 -15 230 258 0 45 chr2 213163444 213163510 -37524344 - MER5A DNA MER1_type -119 70 8 803 211 24 0 chr2 213165502 213165668 -37522186 + MER5A DNA MER1_type 1 170 -19 361 283 249 0 chr2 213166252 213166429 -37521425 + HAL1 LINE L1 2057 2277 -230 1170 179 18 48 chr2 213166429 213166658 -37521196 + AluJb SINE Alu 85 306 -6 3868 123 24 42 chr2 213167148 213167276 -37520578 - L1PA15 LINE L1 -5 6160 6031 288 0 0 0 chr2 213167276 213167308 -37520546 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1844 173 0 0 chr2 213167308 213167591 -37520263 - AluSx SINE Alu -29 283 1 3868 123 24 42 chr2 213167591 213168069 -37519785 - L1PA15 LINE L1 -133 6032 5562 2164 129 55 27 chr2 213168069 213168434 -37519420 - THE1C LTR MaLR 0 375 1 1455 232 74 20 chr2 213168515 213168868 -37518986 + MLT1A2 LTR MaLR 3 374 0 481 295 22 60 chr2 213168888 213169071 -37518783 - MER20B DNA MER1_type -605 178 3 2134 238 82 25 chr2 213169671 213170491 -37517363 - L1ME2 LINE L1 -116 6048 5182 7185 135 17 1 chr2 213170502 213172147 -37515707 - L1MA3 LINE L1 -13 7711 6045 * 35756 108 12 19 chr2 213172143 213178327 -37509527 - L1PA7 LINE L1 0 6154 11 12453 144 38 29 chr2 213178346 213180702 -37507152 - L1MA3 LINE L1 -1512 6053 3718 2389 85 0 3 chr2 213180702 213181009 -37506845 + AluY SINE Alu 1 306 -5 12453 144 38 29 chr2 213181009 213182470 -37505384 - L1MA3 LINE L1 -3847 3718 2171 7616 56 0 0 chr2 213182470 213183429 -37504425 - L1PA5 LINE L1 -1 6153 5199 12453 144 38 29 chr2 213183429 213184015 -37503839 - L1MA3 LINE L1 -5394 2171 1591 414 229 194 65 chr2 213184107 213184386 -37503468 - LTR16A LTR ERVL -67 390 76 2587 228 72 79 chr2 213184511 213185724 -37502130 - L1M4 LINE L1 -1200 4946 3743 2016 87 7 11 chr2 213185735 213186011 -37501843 + L1MA2 LINE L1 5554 5828 -476 43508 34 22 2 chr2 213186012 213192029 -37495825 + L1PA2 LINE L1 13 6155 0 443 88 0 0 chr2 213192033 213192090 -37495764 + L1MA2 LINE L1 5814 5870 -434 1495 246 45 19 chr2 213192231 213192657 -37495197 - L1ME3A LINE L1 0 6170 5734 456 265 73 0 chr2 213195180 213195331 -37492523 + MIR SINE MIR 92 253 -9 198 0 0 0 chr2 213196862 213196884 -37490970 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 631 311 73 53 chr2 213198264 213198659 -37489195 + L2 LINE L2 2911 3313 0 182 256 23 0 chr2 213198819 213198862 -37488992 - MIR SINE MIR -120 142 99 1111 173 13 89 chr2 213198914 213199151 -37488703 + MER20 DNA MER1_type 1 219 0 1062 266 60 32 chr2 213199314 213199811 -37488043 - L1ME4a LINE L1 -1 6120 5610 193 356 127 8 chr2 213200097 213200215 -37487639 - MIR SINE MIR -78 184 53 454 238 170 12 chr2 213200885 213201057 -37486797 + L1MC/D LINE L1 5624 5821 -303 2141 112 7 0 chr2 213201135 213201420 -37486434 - AluSx SINE Alu -25 287 1 1962 135 48 0 chr2 213201858 213202147 -37485707 + AluSx SINE Alu 1 303 -9 186 200 133 78 chr2 213202662 213202713 -37485141 - L3 LINE CR1 -1 1576 1521 299 313 204 0 chr2 213202713 213202860 -37484994 + MER5B DNA MER1_type 2 178 0 311 270 174 35 chr2 213203160 213203419 -37484435 - LTR16A LTR ERVL -66 384 90 248 149 64 0 chr2 213203794 213203841 -37484013 - L2 LINE L2 -8 3264 3215 462 96 0 55 chr2 213206142 213206203 -37481651 + L1PA16 LINE L1 5708 5766 -400 8253 11 0 0 chr2 213206203 213207082 -37480772 + L1PA2 LINE L1 5277 6155 0 462 96 0 55 chr2 213207082 213207093 -37480761 + L1PA16 LINE L1 5766 5776 -390 2444 120 24 26 chr2 213207094 213207477 -37480377 + L1PA16 LINE L1 5769 6150 -16 202 220 34 17 chr2 213207626 213207685 -37480169 + CT-rich Low_complexity Low_complexity 3 62 0 810 280 160 22 chr2 213208273 213209008 -37478846 + L2 LINE L2 2472 3313 0 258 193 0 0 chr2 213209320 213209377 -37478477 + (TCCA)n Simple_repeat Simple_repeat 1 57 0 759 201 93 129 chr2 213209962 213210350 -37477504 - MLT1A2 LTR MaLR 0 374 1 202 257 211 18 chr2 213210709 213210818 -37477036 + L2 LINE L2 2937 3066 -247 209 328 16 0 chr2 213210871 213210935 -37476919 - MIR SINE MIR -119 143 79 1002 77 61 44 chr2 213211170 213211351 -37476503 + MER53 DNA DNA 2 185 -4 486 286 42 24 chr2 213211690 213211858 -37475996 + MIR SINE MIR 86 256 -6 480 203 28 121 chr2 213212054 213212236 -37475618 - L2 LINE L2 -2 3311 3147 565 264 158 84 chr2 213212272 213212442 -37475412 - L2 LINE L2 -1394 1920 1764 2266 104 0 7 chr2 213212442 213212751 -37475103 - AluSc SINE Alu -1 308 2 565 264 158 84 chr2 213212751 213212768 -37475086 - L2 LINE L2 -1550 1764 1750 1775 169 3 29 chr2 213212768 213213082 -37474772 - AluJb SINE Alu -6 306 1 565 264 158 84 chr2 213213082 213213393 -37474461 - L2 LINE L2 -1564 1750 1384 2564 48 0 0 chr2 213215611 213215903 -37471951 - AluY SINE Alu -19 292 1 478 308 7 7 chr2 213216321 213216464 -37471390 - LTR16C LTR ERVL -2 489 347 885 131 0 29 chr2 213217002 213217139 -37470715 - FLAM_C SINE Alu 0 133 1 388 307 34 28 chr2 213217790 213217966 -37469888 - MIR3 SINE MIR -15 193 17 2087 129 3 0 chr2 213218002 213218289 -37469565 - AluSq SINE Alu -25 288 1 521 184 68 41 chr2 213218291 213218438 -37469416 - MLT1K LTR MaLR -7 581 431 1785 130 78 81 chr2 213220696 213221080 -37466774 + MLT1B LTR MaLR 1 383 -7 218 264 19 0 chr2 213224455 213224508 -37463346 + CT-rich Low_complexity Low_complexity 2 55 0 202 345 50 36 chr2 213226452 213226591 -37461263 + L2 LINE L2 2517 2657 -657 289 274 11 21 chr2 213229090 213229185 -37458669 + GA-rich Low_complexity Low_complexity 3 96 0 889 200 6 6 chr2 213229269 213229449 -37458405 + MIR SINE MIR 51 230 -32 1661 168 18 11 chr2 213229456 213229728 -37458126 + AluJb SINE Alu 7 283 -29 369 0 0 0 chr2 213229728 213229769 -37458085 + (CA)n Simple_repeat Simple_repeat 1 41 0 1661 168 18 11 chr2 213229769 213229781 -37458073 + AluJb SINE Alu 283 293 -19 2162 197 26 24 chr2 213230550 213231016 -37456838 - MLT1C LTR MaLR 0 467 1 684 292 86 55 chr2 213231238 213231411 -37456443 + L2 LINE L2 2372 2538 -775 7472 119 33 13 chr2 213231411 213232616 -37455238 - Tigger3b DNA MER2_type 0 1231 3 684 292 86 55 chr2 213232616 213233283 -37454571 + L2 LINE L2 2538 3299 -14 231 36 0 0 chr2 213233288 213233316 -37454538 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 318 231 116 25 chr2 213233360 213233481 -37454373 - MIR SINE MIR -27 235 104 1037 267 48 24 chr2 213234874 213235245 -37452609 - LTR16A LTR ERVL -12 438 59 427 324 99 20 chr2 213235394 213235590 -37452264 + L2 LINE L2 2592 2771 -543 750 182 8 0 chr2 213235590 213235722 -37452132 + MER94 DNA DNA 2 134 0 427 324 99 20 chr2 213235722 213235868 -37451986 + L2 LINE L2 2771 2961 -353 219 304 113 26 chr2 213235999 213236114 -37451740 + L2 LINE L2 3148 3272 0 225 0 0 0 chr2 213236148 213236173 -37451681 + (TG)n Simple_repeat Simple_repeat 2 26 0 346 294 50 8 chr2 213236274 213236393 -37451461 + L3 LINE CR1 264 387 -1190 391 241 28 9 chr2 213237463 213237571 -37450283 - L2 LINE L2 -5 3308 3199 1301 294 184 8 chr2 213237828 213239014 -37448840 + L2 LINE L2 1912 3308 -5 1538 230 83 49 chr2 213239063 213239594 -37448260 - MLT1H LTR MaLR 0 549 1 211 200 22 0 chr2 213240053 213240098 -37447756 + CT-rich Low_complexity Low_complexity 3 48 0 959 173 0 13 chr2 213240107 213240257 -37447597 - AluJb SINE Alu -36 276 129 198 316 145 0 chr2 213243580 213243697 -37444157 - L2 LINE L2 -2 3270 3137 259 308 4 18 chr2 213244047 213244184 -37443670 + T-rich Low_complexity Low_complexity 1 218 0 259 263 0 50 chr2 213244556 213244636 -37443218 + L2 LINE L2 3235 3310 -3 1377 224 22 46 chr2 213244809 213245180 -37442674 + MLT1A1 LTR MaLR 1 362 -3 200 315 0 0 chr2 213245191 213245245 -37442609 + MIR3 SINE MIR 101 154 -54 1886 198 13 35 chr2 213246892 213247265 -37440589 - MLT1A1 LTR MaLR 0 365 1 2240 114 0 19 chr2 213247330 213247637 -37440217 - AluSx SINE Alu -11 301 1 186 43 0 0 chr2 213247938 213247961 -37439893 + (T)n Simple_repeat Simple_repeat 1 23 0 693 259 57 32 chr2 213247968 213248074 -37439780 - LTR16A LTR ERVL -50 400 298 208 0 62 0 chr2 213248074 213248106 -37439748 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 693 259 57 32 chr2 213248106 213248246 -37439608 - LTR16A LTR ERVL -152 298 148 213 229 21 10 chr2 213250833 213250929 -37436925 + GA-rich Low_complexity Low_complexity 3 99 0 207 289 191 21 chr2 213251034 213251269 -37436585 - L2 LINE L2 -118 3195 2921 580 278 125 48 chr2 213251417 213251770 -37436084 - MLT1L LTR MaLR -2 613 234 355 251 217 24 chr2 213252116 213252323 -37435531 + MIR SINE MIR 16 262 0 200 185 74 133 chr2 213254020 213254155 -37433699 + MIR SINE MIR 112 238 -24 936 201 6 0 chr2 213254321 213254500 -37433354 - MER3 DNA MER1_type -29 180 1 2451 89 0 0 chr2 213256409 213256711 -37431143 + AluSc SINE Alu 1 302 -7 500 249 143 103 chr2 213256714 213257035 -37430819 - MER102b DNA MER1_type -1 340 7 330 263 0 0 chr2 213259230 213259310 -37428544 - MIR SINE MIR 0 262 183 288 206 351 8 chr2 213259589 213259720 -37428134 + MIR SINE MIR 86 261 -1 575 194 52 19 chr2 213259731 213259886 -37427968 - MIR SINE MIR -74 188 29 416 196 167 10 chr2 213262401 213262503 -37425351 + HsTC2 DNA Tc2 4 121 -1777 376 247 51 3 chr2 213262519 213262650 -37425204 + HsTC2 DNA Tc2 1288 1608 -290 466 84 99 0 chr2 213262799 213262870 -37424984 - MADE1 DNA Mariner -2 78 1 451 222 60 8 chr2 213262928 213263045 -37424809 + MER110 LTR ERV1 347 469 -22 821 215 77 15 chr2 213263077 213263351 -37424503 + HsTC2 DNA Tc2 1605 1895 -3 506 321 56 19 chr2 213263361 213263576 -37424278 - MIR SINE MIR -5 257 35 29 60 0 0 chr2 213267526 213267576 -37420278 + AT_rich Low_complexity Low_complexity 1 50 0 804 215 70 0 chr2 213267904 213268076 -37419778 - AluJo SINE Alu -12 300 117 1190 147 25 0 chr2 213268095 213268293 -37419561 - L1PA16 LINE L1 -9 6157 5955 3456 85 4 4 chr2 213268384 213268506 -37419348 - L1PA16 LINE L1 -218 5948 5827 7658 194 68 35 chr2 213268506 213268841 -37419013 - L1MC4 LINE L1 -343 5823 5501 750 150 3 0 chr2 213268841 213268978 -37418876 - FLAM_C SINE Alu 0 143 23 7658 194 68 35 chr2 213268978 213271128 -37416726 - L1MC4 LINE L1 -665 5501 3180 188 359 160 0 chr2 213271190 213271321 -37416533 + MIR SINE MIR 86 237 -25 416 187 121 82 chr2 213271331 213271513 -37416341 + MER46C DNA MER2_type 4 192 -146 247 250 0 0 chr2 213271545 213271605 -37416249 + MER46C DNA MER2_type 277 336 -2 198 191 0 0 chr2 213271606 213271653 -37416201 + (ATG)n Simple_repeat Simple_repeat 2 48 0 543 262 89 12 chr2 213273267 213273435 -37414419 - MIR SINE MIR -52 210 30 853 161 0 0 chr2 213273456 213273580 -37414274 + FLAM_C SINE Alu 1 124 -19 353 346 88 19 chr2 213274763 213274960 -37412894 + MIR SINE MIR 3 216 -46 645 289 39 31 chr2 213274965 213275221 -37412633 - MIR SINE MIR 0 262 5 1139 124 0 32 chr2 213276109 213276294 -37411560 - AluSg/x SINE Alu -14 296 118 377 247 169 87 chr2 213276509 213276740 -37411114 + MIR SINE MIR 3 252 -10 229 378 70 6 chr2 213276880 213277036 -37410818 - MIR3 SINE MIR -7 201 36 596 308 26 34 chr2 213277234 213277468 -37410386 + MIR SINE MIR 31 262 0 227 278 0 139 chr2 213277768 213277883 -37409971 + L2 LINE L2 2972 3070 -202 469 269 109 43 chr2 213278199 213278551 -37409303 + L1MC4a LINE L1 5642 6017 -104 512 309 53 10 chr2 213279230 213279437 -37408417 + MIR SINE MIR 3 218 -44 250 185 19 0 chr2 213281769 213281823 -37406031 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 490 318 82 24 chr2 213282825 213283125 -37404729 - L2 LINE L2 -219 3053 2736 1297 99 0 0 chr2 213283160 213283322 -37404532 - AluSc SINE Alu -147 162 1 379 318 9 0 chr2 213284024 213284134 -37403720 + L2 LINE L2 3160 3270 -2 2337 83 0 38 chr2 213284877 213285190 -37402664 + AluSq SINE Alu 1 301 -12 22 0 0 0 chr2 213285808 213285830 -37402024 + AT_rich Low_complexity Low_complexity 1 22 0 2489 62 12 0 chr2 213287693 213288033 -37399821 - L1PA12 LINE L1 -500 5663 5320 3567 76 10 4 chr2 213288033 213288520 -37399334 + L1PA12 LINE L1 5679 6168 0 484 323 7 19 chr2 213288531 213288686 -37399168 + MIR3 SINE MIR 55 207 -1 326 289 96 26 chr2 213289219 213289375 -37398479 - HAL1b LINE L1 -164 1184 1018 333 231 7 56 chr2 213289886 213290029 -37397825 + Charlie7 DNA MER1_type 2437 2572 -40 2016 120 90 33 chr2 213290880 213291247 -37396607 - MLT1B LTR MaLR 0 390 3 271 308 184 11 chr2 213292560 213292745 -37395109 + L2 LINE L2 2018 2234 -1080 524 208 65 32 chr2 213292748 213292902 -37394952 - LTR45B LTR ERV1 0 489 331 205 277 25 67 chr2 213293288 213293407 -37394447 + L2 LINE L2 2257 2370 -944 2599 185 50 10 chr2 213293455 213293974 -37393880 + MLT1F LTR MaLR 1 540 -2 467 289 155 61 chr2 213294537 213294564 -37393290 - MLT1K LTR MaLR -29 559 536 2482 81 0 3 chr2 213294564 213294871 -37392983 - AluSq SINE Alu -6 307 2 467 289 155 61 chr2 213294871 213295352 -37392502 - MLT1K LTR MaLR -52 536 3 2336 94 3 0 chr2 213296347 213296654 -37391200 - AluSx SINE Alu 0 312 5 243 0 0 0 chr2 213297099 213297126 -37390728 + (GA)n Simple_repeat Simple_repeat 1 27 0 * 360 0 0 0 chr2 213297125 213297165 -37390689 + (TG)n Simple_repeat Simple_repeat 2 41 0 391 234 27 0 chr2 213298482 213298593 -37389261 - MER96 DNA MER1_type? 0 175 62 2227 138 21 10 chr2 213299097 213299481 -37388373 - L1PA16 LINE L1 -9 6157 5770 279 218 89 57 chr2 213299631 213299755 -37388099 - MLT1L LTR MaLR -7 608 377 1178 166 66 122 chr2 213299927 213300338 -37387516 + MLT1B LTR MaLR 3 390 0 267 300 30 22 chr2 213300628 213300746 -37387108 + MIR SINE MIR 37 153 -63 2451 98 0 0 chr2 213300772 213301078 -37386776 - AluSc SINE Alu -3 306 1 2256 97 0 0 chr2 213301096 213301384 -37386470 - AluSg SINE Alu -1 309 22 740 276 96 8 chr2 213301457 213301696 -37386158 + MIR SINE MIR 3 262 0 708 306 158 22 chr2 213301698 213302058 -37385796 + L3 LINE CR1 680 1088 -489 325 347 56 44 chr2 213302084 213302335 -37385519 + L3 LINE CR1 1240 1493 -84 839 284 31 63 chr2 213302393 213302742 -37385112 + MER102b DNA MER1_type 1 338 -3 221 264 46 69 chr2 213303197 213303284 -37384570 - L2 LINE L2 -6 3307 3223 676 270 97 26 chr2 213303326 213303552 -37384302 + MIR SINE MIR 8 249 -13 255 31 0 0 chr2 213303624 213303656 -37384198 + (CA)n Simple_repeat Simple_repeat 2 33 0 33 73 0 0 chr2 213304705 213304773 -37383081 + AT_rich Low_complexity Low_complexity 1 68 0 2542 45 0 6 chr2 213305226 213305539 -37382315 - AluY SINE Alu 0 311 1 22 56 0 0 chr2 213306190 213306226 -37381628 + AT_rich Low_complexity Low_complexity 1 36 0 228 316 128 17 chr2 213306356 213306473 -37381381 + L3 LINE CR1 1433 1562 -15 1608 153 23 13 chr2 213308056 213308357 -37379497 - MER39 LTR ERV1 -5 702 399 730 190 130 17 chr2 213308402 213308617 -37379237 - MER39 LTR ERV1 -433 274 2 13936 135 39 8 chr2 213308723 213311066 -37376788 - Tigger1 DNA MER2_type 0 2418 3 424 281 66 57 chr2 213311455 213311681 -37376173 + MIR SINE MIR 22 257 -5 601 284 84 18 chr2 213312098 213312332 -37375522 + MIR SINE MIR 12 262 0 339 353 74 21 chr2 213312718 213312908 -37374946 - MIR SINE MIR 0 262 63 214 250 33 11 chr2 213313634 213313726 -37374128 + G-rich Low_complexity Low_complexity 1 94 0 22 0 0 0 chr2 213314227 213314249 -37373605 + GC_rich Low_complexity Low_complexity 1 22 0 189 195 0 0 chr2 213314503 213314544 -37373310 + G-rich Low_complexity Low_complexity 3 43 0 195 129 0 0 chr2 213314577 213314608 -37373246 + (GGGAA)n Simple_repeat Simple_repeat 1 31 0 188 143 24 0 chr2 213317178 213317220 -37370634 + CT-rich Low_complexity Low_complexity 1 43 0 204 40 0 0 chr2 213321169 213321194 -37366660 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 232 305 53 53 chr2 213321544 213321731 -37366123 - MIR3 SINE MIR -4 204 18 222 37 0 0 chr2 213323371 213323398 -37364456 + (T)n Simple_repeat Simple_repeat 1 27 0 560 167 32 25 chr2 213323584 213323711 -37364143 + MER5B DNA MER1_type 1 178 0 203 289 24 48 chr2 213325182 213325265 -37362589 - MIR SINE MIR -116 146 66 551 243 73 77 chr2 213325328 213325587 -37362267 - MIR SINE MIR -3 259 2 215 313 15 0 chr2 213325681 213325748 -37362106 + MIR3 SINE MIR 106 173 -35 224 211 39 0 chr2 213325799 213325851 -37362003 + MIR SINE MIR 84 137 -71 188 265 0 20 chr2 213325876 213325925 -37361929 + L2 LINE L2 3209 3256 -16 204 296 0 57 chr2 213327474 213327562 -37360292 + MIR SINE MIR 65 147 -61 342 0 0 0 chr2 213328307 213328345 -37359509 + (TG)n Simple_repeat Simple_repeat 2 39 0 261 0 0 0 chr2 213328865 213328894 -37358960 + (TG)n Simple_repeat Simple_repeat 2 30 0 456 230 68 34 chr2 213329411 213329559 -37358295 - MER113 DNA MER1_type? -62 459 307 180 200 0 0 chr2 213329562 213329602 -37358252 + CT-rich Low_complexity Low_complexity 4 43 0 639 240 125 35 chr2 213329609 213329897 -37357957 - MER113 DNA MER1_type? -207 314 1 195 340 0 0 chr2 213329916 213329963 -37357891 + MIR SINE MIR 30 76 -132 825 245 80 77 chr2 213331764 213332091 -37355763 - MER102b DNA MER1_type 0 341 14 233 245 0 0 chr2 213333855 213333908 -37353946 + T-rich Low_complexity Low_complexity 1 53 0 448 245 38 0 chr2 213334769 213334875 -37352979 - L2 LINE L2 -20 3252 3143 236 309 0 0 chr2 213337211 213337279 -37350575 + CT-rich Low_complexity Low_complexity 2 69 0 403 370 36 72 chr2 213337797 213338243 -37349611 + L2 LINE L2 2839 3268 -4 762 218 90 90 chr2 213338877 213339198 -37348656 + MER102a DNA MER1_type 1 321 -9 237 271 103 28 chr2 213339565 213339672 -37348182 - MIR SINE MIR -74 134 20 2235 92 0 33 chr2 213340431 213340735 -37347119 + AluSc SINE Alu 1 294 -15 687 316 115 24 chr2 213343864 213344392 -37343462 - L2 LINE L2 -4 3309 2724 204 97 0 0 chr2 213345017 213345048 -37342806 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 187 208 247 13 chr2 213345448 213345525 -37342329 - MIR SINE MIR -73 135 41 778 257 60 28 chr2 213345688 213345906 -37341948 - MIR SINE MIR -34 228 3 189 0 0 0 chr2 213346442 213346463 -37341391 + (A)n Simple_repeat Simple_repeat 1 21 0 628 184 63 25 chr2 213350769 213350927 -37336927 + L1MD3 LINE L1 6958 7121 -874 4750 218 55 18 chr2 213351502 213352763 -37335091 - L1MC4a LINE L1 -6 7802 6552 2278 112 0 3 chr2 213352764 213353058 -37334796 - AluSx SINE Alu -19 293 1 1237 151 14 23 chr2 213353791 213354009 -37333845 - AluJo SINE Alu -9 303 88 210 229 66 16 chr2 213354228 213354289 -37333565 - L2 LINE L2 -9 3263 3200 568 303 74 11 chr2 213357948 213358123 -37329731 + MIR3 SINE MIR 20 205 -3 489 272 152 58 chr2 213359006 213359230 -37328624 + MIR SINE MIR 2 246 -16 23 0 0 0 chr2 213360425 213360448 -37327406 + AT_rich Low_complexity Low_complexity 1 23 0 2201 81 34 7 chr2 213360624 213360920 -37326934 + AluSx SINE Alu 1 304 -8 969 258 36 12 chr2 213361828 213362076 -37325778 - MIR SINE MIR -6 256 3 189 309 18 0 chr2 213362609 213362664 -37325190 - L2 LINE L2 -1 3271 3216 23 0 0 0 chr2 213364241 213364264 -37323590 + AT_rich Low_complexity Low_complexity 1 23 0 323 286 203 0 chr2 213369118 213369251 -37318603 - MER91A DNA MER1_type 0 196 37 1302 175 5 5 chr2 213369488 213369705 -37318149 + MER20 DNA MER1_type 3 219 0 368 313 60 7 chr2 213371031 213371181 -37316673 - MIR SINE MIR -42 220 63 267 31 0 0 chr2 213372399 213372431 -37315423 + (TTTTTG)n Simple_repeat Simple_repeat 6 37 0 310 303 112 33 chr2 213373575 213373727 -37314127 - MIR SINE MIR -91 171 8 381 345 70 51 chr2 213374087 213374443 -37313411 + L2 LINE L2 2412 2774 -540 1368 177 24 46 chr2 213374468 213374796 -37313058 - MER33 DNA MER1_type -3 321 1 285 325 189 11 chr2 213375089 213375280 -37312574 + MIR SINE MIR 8 232 -30 746 296 38 25 chr2 213375871 213376111 -37311743 + MIR SINE MIR 12 254 -8 392 218 62 36 chr2 213376817 213376960 -37310894 - MIR SINE MIR -63 145 40 811 246 12 60 chr2 213377343 213377394 -37310460 - MLT1J LTR MaLR -269 242 190 2265 102 3 0 chr2 213377394 213377689 -37310165 + AluSx SINE Alu 5 300 -12 811 246 12 60 chr2 213377689 213377889 -37309965 - MLT1J LTR MaLR -321 190 3 297 0 0 0 chr2 213378458 213378491 -37309363 + (TG)n Simple_repeat Simple_repeat 1 33 0 224 294 98 22 chr2 213378639 213378731 -37309123 - L2 LINE L2 -5 3267 3169 239 291 149 28 chr2 213379086 213379227 -37308627 + L2 LINE L2 2915 3072 -200 180 258 0 65 chr2 213379616 213379678 -37308176 - L2 LINE L2 -6 3266 3209 200 308 0 19 chr2 213379706 213379758 -37308096 + L2 LINE L2 3251 3301 -12 1851 158 0 24 chr2 213380470 213380767 -37307087 - AluJb SINE Alu -19 293 4 198 0 0 0 chr2 213381044 213381066 -37306788 + (TA)n Simple_repeat Simple_repeat 2 23 0 1344 183 65 39 chr2 213381703 213381982 -37305872 + AluJo SINE Alu 6 291 -21 21 0 0 0 chr2 213382497 213382518 -37305336 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr2 213382750 213382779 -37305075 + AT_rich Low_complexity Low_complexity 1 29 0 233 254 24 54 chr2 213383391 213383493 -37304361 - MIR SINE MIR -90 118 20 1137 142 42 47 chr2 213383503 213383693 -37304161 + MER5A DNA MER1_type 1 189 0 452 277 9 36 chr2 213383817 213383929 -37303925 - L2 LINE L2 -24 3248 3140 397 296 132 19 chr2 213383994 213384153 -37303701 + L2 LINE L2 2884 3060 -253 362 196 25 29 chr2 213384173 213384274 -37303580 - MER5A DNA MER1_type -77 112 5 1137 149 52 34 chr2 213384621 213384889 -37302965 - Charlie5 DNA MER1_type 0 2624 2352 718 199 92 31 chr2 213384869 213385065 -37302789 - Charlie5 DNA MER1_type -2398 214 7 * 2572 44 0 25 chr2 213385270 213385589 -37302265 + AluY SINE Alu 1 311 0 23 0 0 0 chr2 213386245 213386268 -37301586 + AT_rich Low_complexity Low_complexity 1 23 0 844 242 246 17 chr2 213386914 213387357 -37300497 - L2 LINE L2 -38 3275 2743 583 183 63 0 chr2 213387377 213387503 -37300351 - Charlie4 DNA MER1_type -7 1954 1821 350 290 9 19 chr2 213387521 213387628 -37300226 - L2 LINE L2 -585 2729 2624 272 184 120 40 chr2 213387740 213387865 -37299989 + Charlie7 DNA MER1_type 2431 2565 -47 21 0 0 0 chr2 213389022 213389043 -37298811 + AT_rich Low_complexity Low_complexity 1 21 0 683 208 127 36 chr2 213390789 213391010 -37296844 - MIR SINE MIR -15 247 7 202 308 0 15 chr2 213392362 213392427 -37295427 - L2 LINE L2 -5 3267 3204 743 214 87 72 chr2 213394632 213394964 -37292890 + Charlie8 DNA MER1_type 85 421 -1996 2272 97 13 6 chr2 213395426 213395737 -37292117 - AluSq SINE Alu 0 313 1 1782 203 49 72 chr2 213396499 213397011 -37290843 - MLT1D LTR MaLR -3 502 3 286 237 8 13 chr2 213397061 213397188 -37290666 + MIR SINE MIR 8 184 -78 214 225 14 14 chr2 213397264 213397335 -37290519 + GA-rich Low_complexity Low_complexity 2 72 0 840 274 116 20 chr2 213398114 213398417 -37289437 - MLT1K LTR MaLR -65 523 192 244 275 88 11 chr2 213398638 213398729 -37289125 + MIR SINE MIR 154 251 -11 850 267 42 0 chr2 213398987 213399204 -37288650 - MIR SINE MIR -1 261 36 360 103 0 0 chr2 213399533 213399591 -37288263 + (CA)n Simple_repeat Simple_repeat 2 59 0 273 29 0 0 chr2 213401523 213401557 -37286297 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 192 40 0 0 chr2 213405254 213405279 -37282575 + (TA)n Simple_repeat Simple_repeat 1 25 0 183 80 0 0 chr2 213405678 213405703 -37282151 + (TG)n Simple_repeat Simple_repeat 2 26 0 2354 115 50 10 chr2 213408029 213408412 -37279442 + L1MA8 LINE L1 5889 6286 -5 222 219 55 82 chr2 213408425 213408498 -37279356 - MIR SINE MIR -126 136 66 272 327 72 7 chr2 213408662 213408815 -37279039 - MIR3 SINE MIR -28 180 18 294 244 76 34 chr2 213408822 213408941 -37278913 + MER113 DNA MER1_type? 1 124 -397 324 0 0 0 chr2 213410720 213410756 -37277098 + (A)n Simple_repeat Simple_repeat 1 36 0 25 0 0 0 chr2 213411149 213411174 -37276680 + AT_rich Low_complexity Low_complexity 1 25 0 517 278 32 27 chr2 213411345 213411532 -37276322 + MER5A DNA MER1_type 1 188 -1 2211 135 0 0 chr2 213411976 213412288 -37275566 + AluSx SINE Alu 1 312 0 477 0 0 0 chr2 213412528 213412581 -37275273 + (GA)n Simple_repeat Simple_repeat 1 53 0 489 342 32 11 chr2 213414743 213414930 -37272924 + MIR3 SINE MIR 17 207 -1 315 273 78 55 chr2 213415015 213415143 -37272711 - L2 LINE L2 -1 3271 3141 227 288 36 45 chr2 213415522 213415633 -37272221 + MIR SINE MIR 153 262 0 260 238 107 47 chr2 213416257 213416375 -37271479 + MIR SINE MIR 28 151 -71 226 308 222 8 chr2 213416926 213417043 -37270811 - MIR3 SINE MIR -62 146 5 371 330 57 77 chr2 213417991 213418291 -37269563 - L2 LINE L2 -90 3182 2889 250 246 95 103 chr2 213418478 213418604 -37269250 - MIR SINE MIR -64 144 47 2245 109 0 0 chr2 213418604 213418897 -37268957 - AluSg SINE Alu -13 297 5 255 200 0 0 chr2 213419364 213419409 -37268445 + L2 LINE L2 3264 3308 -5 475 247 111 25 chr2 213419438 213419600 -37268254 + MIR SINE MIR 1 176 -86 498 311 120 14 chr2 213419616 213420174 -37267680 - L2 LINE L2 -4 3309 2684 387 308 96 24 chr2 213420166 213420374 -37267480 + L2 LINE L2 2399 2621 -693 * 257 292 14 0 chr2 213420390 213420462 -37267392 - L2 LINE L2 -974 2340 2268 234 0 0 51 chr2 213420463 213420502 -37267352 + L1PA3 LINE L1 6119 6155 0 196 338 14 0 chr2 213420523 213420597 -37267257 + MIR SINE MIR 181 255 -7 189 0 0 0 chr2 213420598 213420619 -37267235 + (T)n Simple_repeat Simple_repeat 1 21 0 345 282 36 44 chr2 213420667 213420848 -37267006 + MIR SINE MIR 30 212 -50 1159 130 12 0 chr2 213421012 213421181 -37266673 - AluSg/x SINE Alu -7 303 133 1000 210 19 5 chr2 213421224 213421429 -37266425 + MER3 DNA MER1_type 1 208 -1 22 0 0 0 chr2 213422362 213422384 -37265470 + AT_rich Low_complexity Low_complexity 1 22 0 233 270 144 0 chr2 213423250 213423361 -37264493 - L1ME4a LINE L1 -21 6100 5974 548 253 123 11 chr2 213423447 213423463 -37264391 - L1MC4a LINE L1 -302 5819 5806 518 213 95 30 chr2 213423463 213423632 -37264222 - MER104 DNA MER2_type 0 180 1 548 253 123 11 chr2 213423632 213423831 -37264023 - L1MC4a LINE L1 -315 5806 5618 517 155 41 0 chr2 213423834 213423931 -37263923 + L1MA8 LINE L1 6186 6286 -5 2014 56 0 0 chr2 213423952 213424203 -37263651 - L1PA13 LINE L1 -82 6081 5831 435 132 73 0 chr2 213424204 213424272 -37263582 + L1PA13 LINE L1 6087 6159 -4 242 327 59 30 chr2 213424819 213424920 -37262934 - L2 LINE L2 -47 3225 3122 325 349 52 23 chr2 213425785 213425957 -37261897 + MER5B DNA MER1_type 1 177 -1 189 256 0 0 chr2 213426560 213426603 -37261251 - L2 LINE L2 -16 3256 3214 964 270 85 7 chr2 213427957 213428264 -37259590 - MLT1J1 LTR MaLR -109 337 7 240 365 43 39 chr2 213428289 213428497 -37259357 + L2 LINE L2 2440 2648 -666 194 383 53 0 chr2 213428504 213428598 -37259256 - L2 LINE L2 -2 3270 3172 901 122 149 0 chr2 213428645 213428793 -37259061 + FRAM SINE Alu 1 162 -14 435 262 37 61 chr2 213428898 213429112 -37258742 + L2 LINE L2 3073 3281 -32 2218 106 10 7 chr2 213429125 213429427 -37258427 + AluSx SINE Alu 1 303 -9 2506 33 36 23 chr2 213432522 213432829 -37255025 + AluY SINE Alu 1 311 0 608 244 13 19 chr2 213433106 213433262 -37254592 + MIR SINE MIR 64 218 -44 22 0 0 0 chr2 213433334 213433356 -37254498 + AT_rich Low_complexity Low_complexity 1 22 0 1425 252 92 7 chr2 213433448 213433861 -37253993 - LTR33A LTR ERVL -10 513 66 1305 71 0 0 chr2 213434141 213434351 -37253503 + (TTC)n Simple_repeat Simple_repeat 1 210 0 299 144 22 22 chr2 213434351 213434441 -37253413 + CT-rich Low_complexity Low_complexity 5 94 0 189 74 0 0 chr2 213436333 213436360 -37251494 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 249 256 51 26 chr2 213436479 213436557 -37251297 - L2 LINE L2 -310 3003 2924 212 122 24 0 chr2 213436635 213436676 -37251178 + CT-rich Low_complexity Low_complexity 2 43 0 206 344 11 21 chr2 213439466 213439559 -37248295 - MIR SINE MIR -72 136 45 530 297 83 22 chr2 213440417 213440646 -37247208 + MIR SINE MIR 14 256 -6 733 201 82 26 chr2 213441581 213441775 -37246079 - MIR SINE MIR -54 208 4 1522 211 75 71 chr2 213442262 213442727 -37245127 - MLT1C LTR MaLR 0 467 1 214 248 195 71 chr2 213442757 213442827 -37245027 - MIR SINE MIR -116 146 86 8238 51 9 1 chr2 213442827 213443785 -37244069 - LTR5 LTR ERVK -3 966 1 214 248 195 71 chr2 213443785 213443827 -37244027 - MIR SINE MIR -176 86 20 1563 165 59 36 chr2 213444972 213445275 -37242579 - AluJo SINE Alu -2 310 1 543 282 93 55 chr2 213446455 213446989 -37240865 - L1ME LINE L1 -392 5770 5213 219 114 0 0 chr2 213447657 213447692 -37240162 + (CCTA)n Simple_repeat Simple_repeat 1 35 0 254 202 84 92 chr2 213448022 213448141 -37239713 + MLT1F LTR MaLR 425 542 0 425 303 155 35 chr2 213448260 213448360 -37239494 - L1ME4a LINE L1 -162 5959 5872 342 121 35 0 chr2 213448360 213448418 -37239436 - L1MA7 LINE L1 -1 6290 6231 425 303 155 35 chr2 213448418 213448937 -37238917 - L1ME4a LINE L1 -249 5872 5264 13880 168 30 48 chr2 213449354 213450297 -37237557 - L1MA5 LINE L1 0 7362 6403 2193 117 0 0 chr2 213450297 213450588 -37237266 - AluSc SINE Alu -18 291 1 13880 168 30 48 chr2 213450588 213451136 -37236718 - L1MA5 LINE L1 -959 6403 5846 2832 13 0 0 chr2 213451136 213451442 -37236412 + AluYb8 SINE Alu 1 306 -12 13880 168 30 48 chr2 213451442 213451751 -37236103 - L1MA5 LINE L1 -1516 5846 5533 2178 109 31 0 chr2 213451751 213452045 -37235809 - AluSp SINE Alu -10 303 1 13880 168 30 48 chr2 213452045 213452511 -37235343 - L1MA5 LINE L1 -1829 5533 5060 1944 163 0 22 chr2 213452511 213452528 -37235326 - AluJb SINE Alu 0 312 296 243 0 0 0 chr2 213452528 213452555 -37235299 + (TG)n Simple_repeat Simple_repeat 2 28 0 1944 163 0 22 chr2 213452555 213452856 -37234998 - AluJb SINE Alu -16 296 1 13880 168 30 48 chr2 213452856 213454357 -37233497 - L1MA5 LINE L1 -2302 5060 3533 2784 13 0 22 chr2 213454357 213454675 -37233179 - AluY SINE Alu 0 311 1 13880 168 30 48 chr2 213454675 213456611 -37231243 - L1MA5 LINE L1 -3829 3533 1722 1323 243 118 95 chr2 213456593 213457330 -37230524 - L1MA5 LINE L1 -6201 1008 255 * 2948 75 95 7 chr2 213457333 213457745 -37230109 - LTR7 LTR ERV1 -2 448 1 2437 93 48 13 chr2 213457745 213458122 -37229732 - HERVH LTR ERV1 0 7713 7324 1448 125 19 0 chr2 213458122 213458338 -37229516 - HERVH LTR ERV1 -1894 5819 5600 3874 146 73 2 chr2 213458339 213458957 -37228897 - HERVH LTR ERV1 -2564 5149 4488 27858 98 6 15 chr2 213458959 213462988 -37224866 - HERVH LTR ERV1 -3720 3993 1 2916 76 98 5 chr2 213462990 213463400 -37224454 - LTR7 LTR ERV1 -2 448 1 1029 198 30 67 chr2 213463400 213463668 -37224186 - L1MA5 LINE L1 -6951 258 1 248 245 0 0 chr2 213463706 213463759 -37224095 - L1M4 LINE L1 -2472 3674 3622 1691 171 71 66 chr2 213463759 213464139 -37223715 + MLT1B LTR MaLR 1 382 -8 1522 279 28 11 chr2 213464196 213464654 -37223200 - HAL1 LINE L1 -384 2123 1658 247 251 54 92 chr2 213464647 213464942 -37222912 - L1MEd LINE L1 -4905 1214 931 * 198 319 14 14 chr2 213465653 213465722 -37222132 + MIR SINE MIR 11 79 -183 329 297 0 0 chr2 213465731 213465805 -37222049 + L2 LINE L2 3194 3267 -5 217 217 22 0 chr2 213465866 213465912 -37221942 + L2 LINE L2 3255 3301 -12 2058 108 14 20 chr2 213466304 213466601 -37221253 + AluSx SINE Alu 1 295 -17 2409 90 0 3 chr2 213467135 213467447 -37220407 + AluSp SINE Alu 1 311 -2 4138 146 11 62 chr2 213467557 213468285 -37219569 + LTR8 LTR ERV1 1 691 0 188 86 29 0 chr2 213468484 213468519 -37219335 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 2008 146 0 0 chr2 213468522 213468802 -37219052 - AluSx SINE Alu -32 280 1 2483 86 0 0 chr2 213468971 213469272 -37218582 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 213469415 213469436 -37218418 + AT_rich Low_complexity Low_complexity 1 21 0 396 302 79 60 chr2 213470449 213470680 -37217174 + MIR SINE MIR 27 260 -2 432 0 0 0 chr2 213471520 213471568 -37216286 + (CA)n Simple_repeat Simple_repeat 2 49 0 508 295 124 18 chr2 213472581 213472798 -37215056 - MIR SINE MIR -11 251 12 345 65 0 0 chr2 213472994 213473040 -37214814 + MADE1 DNA Mariner 35 80 0 323 280 38 109 chr2 213473064 213473486 -37214368 + L2 LINE L2 2282 2673 -641 43119 36 23 3 chr2 213473683 213479707 -37208147 - L1PA3 LINE L1 -1 6154 7 491 216 35 0 chr2 213479718 213479834 -37208020 - L1ME2 LINE L1 -40 6193 6074 * 2294 234 79 35 chr2 213479825 213481448 -37206406 - L1ME2 LINE L1 -741 5492 3680 690 277 19 0 chr2 213481543 213481698 -37206156 - MER5A DNA MER1_type -30 159 2 1613 278 50 57 chr2 213481700 213482392 -37205462 - L1ME2 LINE L1 -4333 2063 1379 2714 162 24 80 chr2 213482392 213482941 -37204913 - MLT2B1 LTR ERVL 0 520 3 1613 278 50 57 chr2 213482941 213483323 -37204531 - L1ME2 LINE L1 -5017 1379 996 515 281 85 9 chr2 213483426 213483767 -37204087 - L1ME2 LINE L1 -5175 1030 664 428 20 0 0 chr2 213483855 213483905 -37203949 + MADE1 DNA Mariner 1 50 -30 881 314 56 21 chr2 213484103 213484479 -37203375 - L1ME2 LINE L1 -5971 425 37 808 281 50 23 chr2 213484670 213484930 -37202924 + MER102b DNA MER1_type 73 339 -2 2266 123 118 59 chr2 213484963 213485033 -37202821 - MSTB1 LTR MaLR 0 432 368 2448 90 0 6 chr2 213485033 213485345 -37202509 + AluY SINE Alu 1 310 -1 2266 123 118 59 chr2 213485345 213485681 -37202173 - MSTB1 LTR MaLR -64 368 2 613 299 20 10 chr2 213486211 213486408 -37201446 - MIR SINE MIR -11 251 53 435 301 34 51 chr2 213486918 213487094 -37200760 - MIR3 SINE MIR -13 195 23 476 278 83 18 chr2 213487763 213487932 -37199922 + MIR SINE MIR 73 252 -10 279 222 28 14 chr2 213488589 213488661 -37199193 + MLT1K LTR MaLR 191 263 -325 28 29 0 0 chr2 213489525 213489560 -37198294 + AT_rich Low_complexity Low_complexity 1 35 0 516 276 103 106 chr2 213490322 213490887 -37196967 - MLT1K LTR MaLR -2 586 24 21 0 0 0 chr2 213491009 213491030 -37196824 + AT_rich Low_complexity Low_complexity 1 21 0 730 262 90 9 chr2 213491237 213491558 -37196296 + LTR16A1 LTR ERVL 111 457 0 258 131 8 3 chr2 213491776 213492015 -37195839 + AluSx SINE Alu 1 300 -1 1611 190 30 0 chr2 213492295 213492590 -37195264 + LTR32 LTR ERVL 13 316 -155 874 181 0 31 chr2 213492642 213492802 -37195052 + LTR32 LTR ERVL 317 471 0 862 256 74 139 chr2 213493008 213493904 -37193950 + L3 LINE CR1 629 1465 -112 628 313 69 5 chr2 213493913 213494130 -37193724 - MIR SINE MIR -2 260 30 2889 77 8 8 chr2 213494165 213494529 -37193325 - THE1B LTR MaLR 0 364 1 926 244 154 30 chr2 213494715 213495079 -37192775 - MLT1I LTR MaLR 0 409 1 2129 115 3 32 chr2 213498925 213499238 -37188616 - AluSx SINE Alu -8 304 1 1004 56 80 0 chr2 213499427 213499552 -37188302 - MER85 DNA T2_type -4 135 1 654 298 35 0 chr2 213500741 213500939 -37186915 - MIR SINE MIR -41 221 17 2404 87 0 3 chr2 213501245 213501544 -37186310 - AluSq SINE Alu -15 298 1 551 307 167 85 chr2 213501544 213502016 -37185838 + MLT1K LTR MaLR 8 518 -70 2522 71 0 0 chr2 213502083 213502391 -37185463 - AluY SINE Alu -3 308 1 196 257 0 29 chr2 213502806 213502876 -37184978 + L2 LINE L2 3165 3232 -81 739 201 16 76 chr2 213502968 213503152 -37184702 + MER5A DNA MER1_type 16 188 -1 634 199 149 7 chr2 213503180 213503321 -37184533 + MER5A DNA MER1_type 17 177 -12 182 246 43 58 chr2 213503312 213503381 -37184473 + MER5A DNA MER1_type 8 75 -114 * 220 219 31 10 chr2 213503389 213503460 -37184394 - MER5A DNA MER1_type -114 75 4 3861 153 54 25 chr2 213504160 213504867 -37182987 + LTR8A LTR ERV1 1 727 0 24 32 0 0 chr2 213505381 213505412 -37182442 + AT_rich Low_complexity Low_complexity 1 31 0 638 269 86 45 chr2 213505816 213506061 -37181793 - LTR16A1 LTR ERVL -4 453 199 2698 153 0 2 chr2 213506112 213506516 -37181338 + MER57A LTR ERV1 1 403 0 1840 130 29 7 chr2 213506778 213507054 -37180800 + AluJo SINE Alu 1 282 -30 180 0 0 0 chr2 213507057 213507077 -37180777 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 268 209 189 34 chr2 213507090 213507168 -37180686 + MIR SINE MIR 92 157 -105 4769 63 5 0 chr2 213507168 213507719 -37180135 + MER41A LTR ERV1 1 554 0 268 209 189 34 chr2 213507719 213507788 -37180066 + MIR SINE MIR 157 262 0 339 205 26 26 chr2 213508287 213508365 -37179489 + MER116 DNA Mariner 1 78 -2 1915 214 37 31 chr2 213508381 213508839 -37179015 + LTR40c LTR ERVL 4 464 -1 221 357 24 56 chr2 213509676 213509802 -37178052 - L2 LINE L2 -13 3259 3138 427 280 88 8 chr2 213509998 213510123 -37177731 + L2 LINE L2 3138 3272 0 398 266 75 97 chr2 213510765 213511085 -37176769 + MLT1H LTR MaLR 109 421 -128 256 276 52 75 chr2 213511756 213511890 -37175964 + L2 LINE L2 3138 3268 -4 215 407 47 16 chr2 213513088 213513346 -37174508 + L2 LINE L2 2826 3091 -181 306 107 0 0 chr2 213513411 213513467 -37174387 + (TA)n Simple_repeat Simple_repeat 1 56 0 198 363 140 22 chr2 213516248 213516427 -37171427 + MIR SINE MIR 12 211 -51 3793 147 48 14 chr2 213516788 213517454 -37170400 + L1MB2 LINE L1 5480 6168 -3 1428 63 0 0 chr2 213518678 213518853 -37169001 - AluY SINE Alu -10 301 127 778 99 18 18 chr2 213518959 213519070 -37168784 - AluY SINE Alu -199 112 2 613 317 54 12 chr2 213519253 213519493 -37168361 - MIR SINE MIR 0 262 13 395 224 13 0 chr2 213521398 213521474 -37166380 - MER5A DNA MER1_type -1 188 112 452 281 108 16 chr2 213521737 213521840 -37166014 - MIR SINE MIR -41 221 129 2539 87 3 0 chr2 213521840 213522152 -37165702 + AluSp SINE Alu 1 313 0 452 281 108 16 chr2 213522152 213522233 -37165621 - MIR SINE MIR -133 129 20 2244 101 3 0 chr2 213523485 213523782 -37164072 - AluY SINE Alu -10 301 4 427 99 14 56 chr2 213524174 213524245 -37163609 + MER5A DNA MER1_type 2 69 -120 266 57 0 0 chr2 213524252 213524287 -37163567 + U2 snRNA snRNA 1 35 -153 774 238 11 26 chr2 213524298 213524445 -37163409 - MER5A DNA MER1_type -3 186 41 180 0 0 0 chr2 213524445 213524465 -37163389 + (CTG)n Simple_repeat Simple_repeat 1 20 0 774 238 11 26 chr2 213524465 213524506 -37163348 - MER5A DNA MER1_type -148 41 1 556 264 39 39 chr2 213524514 213524692 -37163162 + MER5B DNA MER1_type 1 178 0 397 318 8 16 chr2 213524778 213524904 -37162950 + MIR3 SINE MIR 30 154 -54 29 78 0 0 chr2 213524922 213524986 -37162868 + AT_rich Low_complexity Low_complexity 1 64 0 2342 111 35 16 chr2 213525840 213526208 -37161646 + THE1C LTR MaLR 1 375 0 10849 103 30 8 chr2 213526208 213527755 -37160099 + THE1B-int LTR MaLR 1 1580 0 2478 115 3 14 chr2 213527756 213528122 -37159732 + THE1B LTR MaLR 3 364 0 2268 92 3 7 chr2 213528466 213528758 -37159096 + AluSg1 SINE Alu 1 291 -18 553 275 35 0 chr2 213529066 213529225 -37158629 - MIR SINE MIR -66 196 31 293 266 46 18 chr2 213529366 213529517 -37158337 + L1ME LINE L1 5533 5659 -462 6746 55 6 0 chr2 213529788 213530708 -37157146 - L1PA6 LINE L1 -2 6152 5221 506 285 30 12 chr2 213531355 213531520 -37156334 + MIR SINE MIR 24 191 -71 646 186 243 29 chr2 213531558 213531768 -37156086 - MIR SINE MIR 0 262 8 5471 232 40 21 chr2 213531818 213532103 -37155751 - L1MC1 LINE L1 0 6333 6055 1622 208 10 0 chr2 213532103 213532396 -37155458 - AluJo SINE Alu -15 297 2 5471 232 40 21 chr2 213532396 213534868 -37152986 - L1MC1 LINE L1 -278 6055 3515 21 0 0 0 chr2 213534893 213534914 -37152940 + AT_rich Low_complexity Low_complexity 1 21 0 1304 118 0 59 chr2 213534914 213535134 -37152720 - AluSp SINE Alu -7 306 100 466 267 46 67 chr2 213535179 213535374 -37152480 - MIR SINE MIR -16 246 56 207 269 0 0 chr2 213535485 213535537 -37152317 - L2 LINE L2 0 3313 3262 545 282 7 0 chr2 213535706 213535848 -37152006 + MIR SINE MIR 110 252 -10 29 47 0 0 chr2 213536130 213536173 -37151681 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 213536461 213536484 -37151370 + AT_rich Low_complexity Low_complexity 1 23 0 385 259 60 0 chr2 213536660 213536776 -37151078 - MIR SINE MIR 0 262 140 333 242 48 32 chr2 213537005 213537077 -37150777 - MIR SINE MIR 0 262 186 965 43 29 0 chr2 213537077 213537216 -37150638 + (TCTA)n Simple_repeat Simple_repeat 2 144 0 333 242 48 32 chr2 213537216 213537267 -37150587 - MIR SINE MIR -76 186 137 854 276 77 50 chr2 213538443 213539004 -37148850 - L1ME4a LINE L1 -3 6118 5543 25 51 0 0 chr2 213539192 213539231 -37148623 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr2 213539470 213539493 -37148361 + AT_rich Low_complexity Low_complexity 1 23 0 336 252 93 60 chr2 213539503 213539805 -37148049 - L1ME4a LINE L1 -222 5899 5588 186 43 0 0 chr2 213540233 213540256 -37147598 + (CA)n Simple_repeat Simple_repeat 2 24 0 23 54 0 0 chr2 213540341 213540378 -37147476 + AT_rich Low_complexity Low_complexity 1 37 0 519 268 68 41 chr2 213540458 213540678 -37147176 + L1ME LINE L1 5522 5747 -374 538 302 34 20 chr2 213542128 213542277 -37145577 - L2 LINE L2 0 3272 3122 1268 231 38 101 chr2 213542327 213542752 -37145102 - MER21B LTR ERV1 -465 398 1 1187 250 86 27 chr2 213542759 213543167 -37144687 - L2 LINE L2 -1097 2217 1786 486 143 0 0 chr2 213545057 213545148 -37142706 + (TGGA)n Simple_repeat Simple_repeat 3 93 0 700 237 51 19 chr2 213545449 213545664 -37142190 + LTR16B LTR ERVL 243 464 0 21 36 0 0 chr2 213547140 213547168 -37140686 + AT_rich Low_complexity Low_complexity 1 28 0 243 235 25 12 chr2 213547614 213547695 -37140159 - MIR SINE MIR -74 188 107 1492 160 20 92 chr2 213547714 213548107 -37139747 + MLT1A1 LTR MaLR 1 365 0 213 246 355 9 chr2 213548138 213548248 -37139606 + MER5A DNA MER1_type 13 160 -29 24591 150 14 20 chr2 213548290 213549560 -37138294 - L1PA10 LINE L1 -287 5881 4605 2248 90 17 3 chr2 213549560 213549850 -37138004 - AluY SINE Alu -17 294 1 24591 150 14 20 chr2 213549850 213553861 -37133993 - L1PA10 LINE L1 -1563 4605 638 975 199 151 14 chr2 213553932 213554284 -37133570 - LTR37A LTR ERV1 -4 422 23 267 303 140 22 chr2 213554686 213554864 -37132990 - MIR SINE MIR -44 218 20 585 229 38 38 chr2 213556361 213556518 -37131336 + L2 LINE L2 3156 3312 -1 394 247 112 79 chr2 213556695 213556775 -37131079 - MIR SINE MIR -33 229 153 2295 90 3 29 chr2 213556775 213557085 -37130769 - AluY SINE Alu -8 303 2 394 247 112 79 chr2 213557085 213557182 -37130672 - MIR SINE MIR -109 153 46 196 167 0 28 chr2 213557271 213557307 -37130547 + MIR SINE MIR 112 146 -62 22 0 0 0 chr2 213557878 213557900 -37129954 + AT_rich Low_complexity Low_complexity 1 22 0 198 306 189 18 chr2 213558231 213558342 -37129512 + L2 LINE L2 3142 3271 -1 333 295 19 149 chr2 213559321 213559582 -37128272 - L2 LINE L2 -5 3267 3041 266 353 63 11 chr2 213559585 213559775 -37128079 + L2 LINE L2 1212 1411 -1903 2029 133 0 0 chr2 213560843 213561121 -37126733 + AluSx SINE Alu 27 304 -8 22 56 0 0 chr2 213561353 213561389 -37126465 + AT_rich Low_complexity Low_complexity 1 36 0 482 269 32 38 chr2 213561564 213561750 -37126104 - L1MC4a LINE L1 -1921 5887 5703 536 275 67 102 chr2 213562899 213563350 -37124504 + L1MCc LINE L1 22 456 -5967 198 0 0 0 chr2 213563398 213563420 -37124434 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 381 43 0 0 chr2 213563419 213563466 -37124388 + (GA)n Simple_repeat Simple_repeat 2 48 0 2445 227 77 51 chr2 213563471 213564863 -37122991 + L1MCc LINE L1 2594 3990 -2951 2147 132 0 3 chr2 213564863 213565151 -37122703 + AluSx SINE Alu 1 287 -25 2445 227 77 51 chr2 213565151 213565214 -37122640 + L1MCc LINE L1 3990 4050 -2891 435 299 143 52 chr2 213565238 213565384 -37122470 + L1MCc LINE L1 4044 4175 -2766 2133 209 69 14 chr2 213565384 213565876 -37121978 - LTR40a LTR ERVL 0 519 1 435 299 143 52 chr2 213565876 213566113 -37121741 + L1MCc LINE L1 4175 4462 -2479 483 95 0 0 chr2 213566122 213566196 -37121658 - AluSp/q SINE Alu -11 302 229 1971 116 41 0 chr2 213566246 213566591 -37121263 - L1MA2 LINE L1 0 6304 5946 33 73 0 0 chr2 213567220 213567288 -37120566 + AT_rich Low_complexity Low_complexity 1 68 0 183 186 0 0 chr2 213567661 213567704 -37120150 + C-rich Low_complexity Low_complexity 2 44 0 2943 168 55 85 chr2 213617808 213618656 -37069198 - L1M4 LINE L1 -734 5450 4598 2382 217 91 9 chr2 213618938 213619119 -37068735 + L1ME3A LINE L1 5182 5347 -823 1093 179 112 164 chr2 213619119 213619645 -37068209 + MLT1D LTR MaLR 5 503 -2 2382 217 91 9 chr2 213619645 213620239 -37067615 + L1ME3A LINE L1 5347 6026 -144 536 256 41 0 chr2 213620323 213620444 -37067410 - L2 LINE L2 0 3313 3188 711 224 52 33 chr2 213620746 213620956 -37066898 + MLT1H1 LTR MaLR 342 555 0 833 145 0 0 chr2 213621051 213621168 -37066686 + FLAM_C SINE Alu 1 117 -16 417 97 0 0 chr2 213621175 213621247 -37066607 + (TC)n Simple_repeat Simple_repeat 2 73 0 414 0 0 0 chr2 213621247 213621293 -37066561 + (CA)n Simple_repeat Simple_repeat 1 46 0 1052 191 0 0 chr2 213621293 213621466 -37066388 + AluJb SINE Alu 137 309 -3 299 286 126 8 chr2 213621616 213621735 -37066119 + MIR SINE MIR 11 143 -119 2081 162 3 0 chr2 213621837 213622146 -37065708 + AluJb SINE Alu 1 310 -2 262 339 43 43 chr2 213623512 213623698 -37064156 + L2 LINE L2 3072 3257 -15 30 0 0 0 chr2 213624116 213624146 -37063708 + AT_rich Low_complexity Low_complexity 1 30 0 423 125 0 0 chr2 213625874 213625946 -37061908 + (GA)n Simple_repeat Simple_repeat 1 72 0 361 267 12 0 chr2 213626617 213626703 -37061151 - L2 LINE L2 0 3272 3186 676 300 52 26 chr2 213627408 213627675 -37060179 + Charlie8 DNA MER1_type 2 275 -2142 946 255 36 8 chr2 213628700 213628947 -37058907 - MIR SINE MIR 0 262 9 230 342 121 45 chr2 213629113 213629493 -37058361 + L2 LINE L2 1177 1585 -1729 338 215 156 81 chr2 213629599 213629785 -37058069 + MIR SINE MIR 16 215 -47 1666 194 7 0 chr2 213630148 213630437 -37057417 - AluJo SINE Alu -21 291 1 658 232 84 33 chr2 213630484 213630695 -37057159 + MIR SINE MIR 20 252 -10 1996 152 0 0 chr2 213630713 213631027 -37056827 + AluSx SINE Alu 1 314 0 561 66 13 0 chr2 213631047 213631123 -37056731 + MADE1 DNA Mariner 4 80 0 251 250 28 28 chr2 213631514 213631586 -37056268 - MIR3 SINE MIR -12 196 125 233 281 22 34 chr2 213632523 213632612 -37055242 - L2 LINE L2 -219 3053 2966 1236 247 0 26 chr2 213632615 213632927 -37054927 - MLT1A2 LTR MaLR 0 374 71 * 3162 131 8 4 chr2 213632922 213633434 -37054420 - Tigger1 DNA MER2_type -1872 546 33 197 311 0 16 chr2 213633652 213633713 -37054141 + L2 LINE L2 2994 3053 -219 634 335 5 0 chr2 213634745 213634960 -37052894 + L2 LINE L2 2542 2757 -557 374 337 10 0 chr2 213635030 213635128 -37052726 + L2 LINE L2 3121 3219 -53 426 20 0 0 chr2 213635454 213635505 -37052349 + (TG)n Simple_repeat Simple_repeat 2 52 0 22 70 0 0 chr2 213635924 213635967 -37051887 + AT_rich Low_complexity Low_complexity 1 43 0 353 246 218 24 chr2 213636929 213637120 -37050734 - MIR SINE MIR -6 256 32 210 91 0 0 chr2 213637384 213637417 -37050437 + (T)n Simple_repeat Simple_repeat 1 33 0 2163 168 5 20 chr2 213637582 213637976 -37049878 + MLT1B LTR MaLR 3 390 0 342 0 0 0 chr2 213638599 213638637 -37049217 + (CA)n Simple_repeat Simple_repeat 2 39 0 208 327 65 19 chr2 213639324 213639431 -37048423 - L2 LINE L2 -35 3237 3126 431 278 26 9 chr2 213640038 213640153 -37047701 - MIR SINE MIR -71 191 75 246 380 12 12 chr2 213640274 213640445 -37047409 - L2 LINE L2 -236 3036 2866 1611 224 96 39 chr2 213641836 213642102 -37045752 + LTR40a LTR ERVL 1 250 -269 2366 150 59 15 chr2 213642102 213642508 -37045346 - MSTB LTR MaLR -2 424 1 1611 224 96 39 chr2 213642508 213642731 -37045123 + LTR40a LTR ERVL 250 518 -1 410 243 0 0 chr2 213643532 213643635 -37044219 + MLT1L LTR MaLR 513 615 0 238 197 197 0 chr2 213643748 213643814 -37044040 + L2 LINE L2 3235 3313 0 2884 79 3 0 chr2 213644134 213644514 -37043340 - L1PA10 LINE L1 -4 6164 5784 289 333 40 0 chr2 213648062 213648161 -37039693 + MIR3 SINE MIR 85 187 -21 3143 25 0 0 chr2 213648412 213648779 -37039075 - L1PA2 LINE L1 -1 6154 5788 873 274 136 10 chr2 213648913 213649318 -37038536 + L2 LINE L2 2339 2794 -520 492 312 81 30 chr2 213649321 213649555 -37038299 - MLT1J2 LTR MaLR -4 446 201 2466 139 95 13 chr2 213649643 213650118 -37037736 + LTR44 LTR ERV1 1 514 -5 685 261 127 73 chr2 213650261 213650743 -37037111 + L2 LINE L2 2806 3313 0 534 266 116 39 chr2 213651389 213651596 -37036258 + MIR SINE MIR 37 259 -3 321 361 62 48 chr2 213652022 213652249 -37035605 + L2 LINE L2 2807 3036 -236 26 0 0 0 chr2 213652659 213652685 -37035169 + AT_rich Low_complexity Low_complexity 1 26 0 314 319 26 26 chr2 213652879 213652992 -37034862 - L2 LINE L2 -7 3265 3153 416 367 103 22 chr2 213655679 213656096 -37031758 + L2 LINE L2 2812 3262 -10 194 286 79 0 chr2 213657179 213657242 -37030612 - L2 LINE L2 0 3313 3246 438 303 41 21 chr2 213657698 213657926 -37029928 - LTR16C LTR ERVL -3 457 255 1847 182 14 6 chr2 213658447 213658798 -37029056 + MLT2C1 LTR ERVL 1 354 -43 298 181 0 24 chr2 213658805 213658888 -37028966 + (TA)n Simple_repeat Simple_repeat 2 82 0 988 167 56 14 chr2 213658937 213659153 -37028701 + MER2 DNA MER2_type 1 225 -120 647 160 167 7 chr2 213659251 213659401 -37028453 + MER2 DNA MER2_type 172 345 0 8832 149 30 11 chr2 213659626 213660400 -37027454 - L1MA4 LINE L1 0 7719 6961 216 0 0 0 chr2 213660400 213660424 -37027430 + (TC)n Simple_repeat Simple_repeat 2 25 0 8832 149 30 11 chr2 213660424 213662103 -37025751 - L1MA4 LINE L1 -758 6961 5208 2114 141 0 0 chr2 213662103 213662400 -37025454 - AluSx SINE Alu -13 299 3 8832 149 30 11 chr2 213662400 213662480 -37025374 - L1MA4 LINE L1 -2511 5208 5131 4487 93 16 10 chr2 213662478 213663187 -37024667 - L1MA4 LINE L1 -4508 3057 2345 * 10590 135 27 20 chr2 213663198 213665832 -37022022 + L1MA4 LINE L1 10 2679 -3782 11632 94 9 1 chr2 213665832 213668356 -37019498 + L1PA8 LINE L1 3987 6484 -3 12762 165 25 11 chr2 213668356 213670668 -37017186 - L1MA4 LINE L1 -5209 1252 -1091 6848 181 35 9 chr2 213670667 213672402 -37015452 - L1 LINE L1 -2419 5146 3366 * 926 226 142 55 chr2 213672408 213672846 -37015008 + MLT1K LTR MaLR 1 476 0 21 82 0 0 chr2 213673116 213673165 -37014689 + AT_rich Low_complexity Low_complexity 1 49 0 390 258 47 38 chr2 213675325 213675636 -37012218 + ERVL LTR ERVL 3686 4032 -1657 1503 223 45 68 chr2 213675637 213676107 -37011747 + MLT1C LTR MaLR 1 459 -8 333 125 0 0 chr2 213676402 213676458 -37011396 + (TG)n Simple_repeat Simple_repeat 2 57 0 2078 134 3 0 chr2 213676554 213676852 -37011002 + AluSx SINE Alu 6 304 -8 2657 170 20 14 chr2 213676921 213677157 -37010697 - L1MC3 LINE L1 0 7785 7552 2498 150 65 2 chr2 213677157 213677558 -37010296 - MSTB LTR MaLR 0 426 1 2657 170 20 14 chr2 213677558 213677810 -37010044 - L1MC3 LINE L1 -233 7552 7294 326 323 65 38 chr2 213678088 213678274 -37009580 - MIR SINE MIR -50 212 22 1147 171 132 35 chr2 213678277 213678534 -37009320 - MLT1C LTR MaLR 0 467 186 1038 266 50 12 chr2 213680005 213680343 -37007511 + LTR16A LTR ERVL 2 352 -98 195 42 0 0 chr2 213680346 213680370 -37007484 + (TTCCC)n Simple_repeat Simple_repeat 5 28 0 431 260 31 8 chr2 213680373 213680500 -37007354 + LTR16A LTR ERVL 321 450 0 227 231 15 46 chr2 213681454 213681519 -37006335 + CT-rich Low_complexity Low_complexity 4 66 0 4535 185 34 24 chr2 213682133 213683458 -37004396 + L1MB8 LINE L1 4608 5943 -235 1546 136 62 12 chr2 213683458 213683701 -37004153 + AluSx SINE Alu 38 292 -20 4535 185 34 24 chr2 213683701 213683940 -37003914 + L1MB8 LINE L1 5943 6178 0 360 287 76 0 chr2 213684078 213684191 -37003663 - MIR SINE MIR -68 140 31 345 243 29 68 chr2 213685889 213685992 -37001862 + MIR SINE MIR 59 157 -51 1266 194 114 21 chr2 213686006 213686295 -37001559 + MER2 DNA MER2_type 30 345 0 248 242 0 0 chr2 213686330 213686396 -37001458 + T-rich Low_complexity Low_complexity 1 66 0 551 271 160 18 chr2 213688390 213688615 -36999239 + MIR SINE MIR 6 262 0 210 171 0 0 chr2 213689130 213689171 -36998683 + GA-rich Low_complexity Low_complexity 1 41 0 326 303 10 0 chr2 213689998 213690097 -36997757 + GA-rich Low_complexity Low_complexity 3 102 0 237 108 0 0 chr2 213690363 213690400 -36997454 + (CA)n Simple_repeat Simple_repeat 2 38 0 355 342 115 0 chr2 213691917 213692066 -36995788 + MIR SINE MIR 34 215 -47 2073 111 11 0 chr2 213692066 213692368 -36995486 + AluSx SINE Alu 1 305 0 355 342 115 0 chr2 213692368 213692423 -36995431 + MIR SINE MIR 215 262 0 342 0 0 0 chr2 213692646 213692684 -36995170 + (CA)n Simple_repeat Simple_repeat 2 39 0 1995 145 7 0 chr2 213692698 213692988 -36994866 + AluSx SINE Alu 1 292 -20 32 75 0 0 chr2 213693019 213693086 -36994768 + AT_rich Low_complexity Low_complexity 1 67 0 2209 178 67 25 chr2 213693223 213693737 -36994117 + MER39 LTR ERV1 4 707 0 206 244 0 0 chr2 213693784 213693825 -36994029 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 31787 107 16 57 chr2 213694236 213700644 -36987210 - L1PA7 LINE L1 0 6154 12 23 33 0 0 chr2 213700856 213700886 -36986968 + AT_rich Low_complexity Low_complexity 1 30 0 1985 147 0 0 chr2 213700895 213701180 -36986674 - AluSx SINE Alu -22 290 6 348 191 0 45 chr2 213701652 213701741 -36986113 - L1MC4 LINE L1 -511 7531 7447 43 35 0 0 chr2 213702536 213702593 -36985261 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr2 213703607 213703628 -36984226 + AT_rich Low_complexity Low_complexity 1 21 0 715 218 79 6 chr2 213703808 213703973 -36983881 - MER5B DNA MER1_type -1 177 1 320 318 119 8 chr2 213704139 213704265 -36983589 + L2 LINE L2 3123 3262 -10 720 212 8 0 chr2 213704425 213704557 -36983297 - MER94 DNA DNA -1 133 1 942 219 61 16 chr2 213704677 213704924 -36982930 + L1ME3A LINE L1 5901 6158 -12 28 48 0 0 chr2 213705091 213705133 -36982721 + AT_rich Low_complexity Low_complexity 1 42 0 277 259 62 0 chr2 213705178 213705259 -36982595 - MIR SINE MIR -71 191 106 273 235 0 0 chr2 213706957 213707008 -36980846 + MIR SINE MIR 29 79 -129 481 163 8 122 chr2 213707154 213707277 -36980577 + MER58A DNA MER1_type 38 146 0 182 61 0 61 chr2 213707503 213707536 -36980318 + (TGGGGG)n Simple_repeat Simple_repeat 4 34 0 267 354 92 6 chr2 213707796 213707960 -36979894 + MIR SINE MIR 35 212 -50 442 287 126 64 chr2 213707988 213708600 -36979254 - L1M4 LINE L1 -1296 4850 4209 1033 98 0 26 chr2 213708697 213708850 -36979004 + AluSg/x SINE Alu 161 309 -3 210 242 0 16 chr2 213710443 213710505 -36977349 + (TG)n Simple_repeat Simple_repeat 2 62 0 269 317 30 54 chr2 213710845 213711012 -36976842 - MIR SINE MIR -95 167 5 575 239 28 0 chr2 213711137 213711246 -36976608 - MER81 DNA DNA 0 114 3 1898 154 97 12 chr2 213712864 213713183 -36974671 - MER7A DNA MER2_type -1 345 2 304 325 45 32 chr2 213713399 213713553 -36974301 - MIR3 SINE MIR -11 197 42 470 366 83 14 chr2 213715003 213715555 -36972299 + L2 LINE L2 1366 1955 -1359 1512 254 68 2 chr2 213715556 213715954 -36971900 + L2 LINE L2 2438 2861 -453 312 180 0 112 chr2 213715958 213716047 -36971807 - MER96 DNA MER1_type? 0 175 97 601 256 76 47 chr2 213716216 213716427 -36971427 + MIR SINE MIR 36 252 -10 396 253 246 37 chr2 213717032 213717329 -36970525 + L2 LINE L2 2950 3308 -5 650 299 60 0 chr2 213718296 213718513 -36969341 - L1MC/D LINE L1 -2024 5784 5555 2487 61 0 0 chr2 213718730 213719025 -36968829 - AluY SINE Alu -3 308 14 1911 176 0 0 chr2 213719468 213719780 -36968074 - AluSx SINE Alu 0 312 1 2108 105 58 0 chr2 213719795 213720090 -36967764 - AluSx SINE Alu 0 312 1 308 357 154 30 chr2 213720405 213721041 -36966813 + L2 LINE L2 2242 2956 -358 2387 112 0 6 chr2 213721399 213721713 -36966141 - AluSx SINE Alu 0 312 1 881 259 31 0 chr2 213721824 213722048 -36965806 + LTR52 LTR ERVL 167 397 -24 1066 211 4 53 chr2 213722097 213722435 -36965419 - L1MEc LINE L1 -3789 3168 2892 * 5337 163 31 55 chr2 213722428 213722642 -36965212 - L1MC3 LINE L1 0 7785 7567 3280 156 13 0 chr2 213722642 213723169 -36964685 - L1MB3 LINE L1 -10 6173 5640 5337 163 31 55 chr2 213723169 213724089 -36963765 - L1MC3 LINE L1 -218 7567 6679 772 194 9 92 chr2 213724079 213724296 -36963558 - L1MEc LINE L1 -5456 1403 1205 * 2590 249 86 34 chr2 213724726 213725587 -36962267 - L1MEc LINE L1 -5923 936 31 2384 67 3 7 chr2 213725599 213725899 -36961955 - AluY SINE Alu -12 299 1 181 300 0 0 chr2 213726276 213726326 -36961528 + L3b LINE CR1 1323 1372 -211 669 322 187 5 chr2 213726350 213726850 -36961004 + L2 LINE L2 2683 3294 -19 2130 124 86 47 chr2 213727670 213728098 -36959756 + MER65A LTR ERV1 1 445 0 400 288 98 64 chr2 213728860 213729311 -36958543 - L1MC4 LINE L1 -219 7823 7358 843 226 4 88 chr2 213730129 213730368 -36957486 - MIR SINE MIR -24 238 20 321 291 0 0 chr2 213731889 213731968 -36955886 - MIR SINE MIR -100 162 84 571 297 61 44 chr2 213731984 213732280 -36955574 - L2 LINE L2 -1 3312 3012 222 219 0 0 chr2 213732387 213732428 -36955426 + L2 LINE L2 3232 3272 0 759 298 16 12 chr2 213732609 213732864 -36954990 - L2 LINE L2 -343 2971 2716 186 305 84 32 chr2 213732848 213732943 -36954911 - MIR3 SINE MIR -97 111 12 * 405 0 0 0 chr2 213734701 213734746 -36953108 + (TG)n Simple_repeat Simple_repeat 1 45 0 387 218 0 0 chr2 213736035 213736113 -36951741 + MER69 DNA AcHobo 2 79 -98 566 330 91 5 chr2 213736152 213736361 -36951493 - MER115 DNA AcHobo -425 268 42 291 245 75 11 chr2 213736393 213736487 -36951367 + MER69 DNA AcHobo 474 573 -1953 * 1162 185 62 35 chr2 213736484 213736825 -36951029 + MER69 DNA AcHobo 2012 2361 -165 1119 133 0 0 chr2 213736838 213736996 -36950858 - FRAM SINE Alu -19 157 1 464 227 15 8 chr2 213737023 213737155 -36950699 + MER69 DNA AcHobo 2394 2526 0 319 314 85 26 chr2 213737289 213737442 -36950412 + MIR3 SINE MIR 40 201 -7 461 319 71 22 chr2 213738766 213738992 -36948862 + MIR SINE MIR 18 254 -8 200 188 0 0 chr2 213739128 213739160 -36948694 + polypyrimidine Low_complexity Low_complexity 4 35 0 182 388 39 39 chr2 213739220 213739323 -36948531 + L2 LINE L2 3150 3252 -20 243 0 0 0 chr2 213739830 213739857 -36947997 + (T)n Simple_repeat Simple_repeat 1 27 0 1566 217 8 5 chr2 213740056 213740434 -36947420 - L1MC3 LINE L1 -7 7778 7400 10500 218 39 24 chr2 213740440 213742787 -36945067 - L1MB8 LINE L1 -6 6241 3931 1998 136 7 0 chr2 213742787 213743067 -36944787 - AluSx SINE Alu -12 300 19 10500 218 39 24 chr2 213743067 213744854 -36943000 - L1MB8 LINE L1 -2316 3931 2096 1144 195 11 18 chr2 213744854 213745126 -36942728 - L1MC2 LINE L1 -12 6332 6063 10500 218 39 24 chr2 213745126 213745496 -36942358 - L1MB8 LINE L1 -4151 2096 1733 4530 251 67 53 chr2 213745508 213746139 -36941715 - L1M4c LINE L1 -4436 2702 2081 1893 159 3 0 chr2 213746139 213746422 -36941432 - AluJb SINE Alu -26 286 3 4530 251 67 53 chr2 213746422 213746778 -36941076 - L1M4c LINE L1 -5057 2081 1731 1442 209 0 51 chr2 213746778 213747093 -36940761 - AluJo SINE Alu -2 300 2 4530 251 67 53 chr2 213747093 213748602 -36939252 - L1M4c LINE L1 -5407 1731 25 960 122 7 14 chr2 213748903 213749050 -36938804 + AluSq/x SINE Alu 1 146 -166 534 117 0 0 chr2 213749050 213749127 -36938727 + AluS SINE Alu 227 303 -8 6048 91 12 0 chr2 213749129 213750013 -36937841 + L1PA11 LINE L1 5280 6174 0 315 0 0 0 chr2 213750026 213750061 -36937793 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 411 280 161 0 chr2 213750069 213750187 -36937667 + MIR SINE MIR 13 149 -113 182 167 0 28 chr2 213750611 213750647 -36937207 + MIR3 SINE MIR 146 180 -28 186 103 0 0 chr2 213751289 213751318 -36936536 + (TG)n Simple_repeat Simple_repeat 2 30 0 2004 229 31 49 chr2 213751436 213751987 -36935867 - MLT1F LTR MaLR -1 541 1 1605 192 88 19 chr2 213752063 213752495 -36935359 - MLT1C LTR MaLR 0 467 6 227 341 32 32 chr2 213752681 213752807 -36935047 - L2 LINE L2 -447 2867 2742 1088 239 62 32 chr2 213752876 213753277 -36934577 - L1ME3 LINE L1 -4 6158 5746 414 253 41 72 chr2 213753389 213753583 -36934271 - MER5A DNA MER1_type -1 188 1 233 333 0 0 chr2 213753715 213753793 -36934061 - L2 LINE L2 -805 2509 2432 414 245 0 10 chr2 213754277 213754379 -36933475 - L3b LINE CR1 -354 1229 1129 237 329 0 0 chr2 213755132 213755208 -36932646 - MIR SINE MIR -85 123 48 21 0 0 0 chr2 213756057 213756078 -36931776 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 213756275 213756306 -36931548 + AT_rich Low_complexity Low_complexity 1 31 0 675 200 15 15 chr2 213756307 213756437 -36931417 - AluJo SINE Alu -67 245 116 3721 156 57 38 chr2 213756485 213756982 -36930872 + L1MB8 LINE L1 5335 5821 -357 1246 172 176 19 chr2 213756982 213757249 -36930605 + AluJb SINE Alu 1 309 -3 2503 80 3 0 chr2 213757249 213757560 -36930294 + AluSp SINE Alu 1 312 -1 3721 156 57 38 chr2 213757560 213757884 -36929970 + L1MB8 LINE L1 5820 6173 -5 371 276 105 13 chr2 213758103 213758255 -36929599 + MIR SINE MIR 47 212 -50 455 288 28 33 chr2 213758280 213758421 -36929433 + MIR SINE MIR 17 156 -66 2208 132 3 0 chr2 213759021 213759332 -36928522 + AluSx SINE Alu 1 312 0 2290 98 0 3 chr2 213759343 213759638 -36928216 + AluSq SINE Alu 1 294 -19 243 292 73 73 chr2 213759659 213759837 -36928017 + L2 LINE L2 3126 3303 -10 206 310 17 0 chr2 213759813 213759871 -36927983 - L2 LINE L2 0 3272 3214 * 2225 104 3 16 chr2 213760347 213760654 -36927200 + AluSx SINE Alu 1 303 -9 338 254 159 24 chr2 213761588 213761766 -36926088 + MIR3 SINE MIR 4 206 -56 23 0 0 0 chr2 213762544 213762567 -36925287 + AT_rich Low_complexity Low_complexity 1 23 0 582 250 8 8 chr2 213763974 213764106 -36923748 - MIR SINE MIR -127 135 4 180 385 0 0 chr2 213764295 213764360 -36923494 - L2 LINE L2 -3 3269 3205 186 224 0 20 chr2 213764513 213764562 -36923292 - MIR SINE MIR -148 114 67 1547 270 22 0 chr2 213765382 213765789 -36922065 + LTR16C LTR ERVL 76 491 0 30 0 0 0 chr2 213766478 213766508 -36921346 + AT_rich Low_complexity Low_complexity 1 30 0 1614 199 3 0 chr2 213767630 213767916 -36919938 + AluJo SINE Alu 1 287 -25 936 196 29 0 chr2 213768358 213768531 -36919323 - MER45A DNA AcHobo 0 178 1 364 319 0 0 chr2 213768889 213769008 -36918846 + L2 LINE L2 3195 3313 0 3354 75 16 0 chr2 213769351 213769788 -36918066 - L1PA10 LINE L1 -13 6155 5712 41 69 0 26 chr2 213770126 213770203 -36917651 + AT_rich Low_complexity Low_complexity 1 78 -35 2310 71 4 0 chr2 213770203 213770513 -36917341 - AluY SINE Alu 0 311 1 2015 159 3 3 chr2 213770513 213770814 -36917040 - AluJb SINE Alu -11 301 1 41 69 0 26 chr2 213770814 213770850 -36917004 + AT_rich Low_complexity Low_complexity 76 113 0 638 162 41 10 chr2 213771203 213771359 -36916495 + MLT1E2 LTR MaLR 1 178 -327 1298 217 86 50 chr2 213771396 213771522 -36916332 + MER39 LTR ERV1 5 125 -582 2264 93 7 13 chr2 213771522 213771823 -36916031 + AluSq SINE Alu 1 299 -14 1298 217 86 50 chr2 213771823 213772191 -36915663 + MER39 LTR ERV1 125 684 -23 237 261 31 0 chr2 213772456 213772521 -36915333 - MLT1K LTR MaLR -352 236 170 2199 128 0 0 chr2 213772750 213773055 -36914799 - AluSx SINE Alu -7 305 1 681 309 23 54 chr2 213773258 213773649 -36914205 - MLT1K LTR MaLR -88 500 122 2085 154 0 0 chr2 213773811 213774122 -36913732 + AluSx SINE Alu 1 311 -1 2374 217 50 38 chr2 213774735 213775349 -36912505 - MLT1E2 LTR MaLR -4 622 1 46 99 0 0 chr2 213775653 213775804 -36912050 + AT_rich Low_complexity Low_complexity 1 151 0 235 267 12 35 chr2 213776344 213776365 -36911489 + (TATG)n Simple_repeat Simple_repeat 1 21 -63 1999 180 15 6 chr2 213776365 213776704 -36911150 + MER61A LTR ERV1 2 343 0 235 267 12 35 chr2 213776704 213776768 -36911086 + (TATG)n Simple_repeat Simple_repeat 21 84 0 384 339 30 6 chr2 213777390 213777558 -36910296 + MIR3 SINE MIR 30 201 -7 234 282 14 14 chr2 213778321 213778392 -36909462 - MIR SINE MIR -106 156 86 981 189 49 46 chr2 213780075 213780396 -36907458 - MER39 LTR ERV1 -2 644 260 1357 188 24 79 chr2 213780408 213780931 -36906923 + MER39-int LTR ERV1 297 607 -4329 290 149 0 0 chr2 213780934 213780981 -36906873 - MER31A LTR ERV1 -179 306 260 372 224 26 0 chr2 213780992 213781065 -36906789 + MER31A LTR ERV1 11 85 -400 304 106 21 0 chr2 213781065 213781112 -36906742 - MER54B LTR ERVL 0 793 746 283 135 154 0 chr2 213781154 213781206 -36906648 + MER67D LTR ERV1 100 159 -355 2003 161 33 15 chr2 213781248 213781584 -36906270 + MER2 DNA MER2_type 3 344 0 314 193 68 65 chr2 213781643 213781696 -36906158 + MER39-int LTR ERV1 889 940 -3996 2226 101 0 0 chr2 213781696 213781994 -36905860 + AluY SINE Alu 1 298 -13 314 193 68 65 chr2 213781994 213782135 -36905719 + MER39-int LTR ERV1 940 1141 -3795 * 468 210 72 70 chr2 213782130 213782442 -36905412 + MER39-int LTR ERV1 1405 3226 -3105 251 300 0 60 chr2 213782371 213782471 -36905383 + LTR57-int LTR ERVL 1377 1470 -3873 * 2419 93 0 0 chr2 213782474 213782785 -36905069 + AluY SINE Alu 1 311 0 21 0 0 0 chr2 213782793 213782814 -36905040 + AT_rich Low_complexity Low_complexity 1 21 0 2637 82 14 34 chr2 213782825 213783240 -36904614 + L1M1 LINE L1 2112 2518 -5047 6381 117 23 50 chr2 213783243 213783472 -36904382 + L1MA2 LINE L1 5101 5335 -969 1765 166 0 10 chr2 213783472 213783762 -36904092 + AluJb SINE Alu 1 287 -25 6381 117 23 50 chr2 213783762 213783801 -36904053 + L1MA2 LINE L1 5335 5374 -930 2197 107 7 0 chr2 213783801 213784092 -36903762 - AluSp SINE Alu -20 293 1 6381 117 23 50 chr2 213784092 213784456 -36903398 + L1MA2 LINE L1 5374 5746 -558 2577 47 0 0 chr2 213784456 213784752 -36903102 + AluY SINE Alu 1 296 -15 6381 117 23 50 chr2 213784752 213785023 -36902831 + L1MA2 LINE L1 5746 6023 -281 2429 83 0 0 chr2 213785023 213785324 -36902530 + AluY SINE Alu 1 301 -10 6381 117 23 50 chr2 213785324 213785667 -36902187 + L1MA2 LINE L1 6023 6304 0 736 188 76 18 chr2 213785774 213785997 -36901857 + MER39-int LTR ERV1 1702 1937 -2999 2367 97 0 0 chr2 213786066 213786374 -36901480 + AluSg SINE Alu 1 308 -2 8767 186 69 73 chr2 213786526 213786879 -36900975 + MER39-int LTR ERV1 2315 2668 -3663 1776 159 6 35 chr2 213786879 213787193 -36900661 + AluJo SINE Alu 1 305 -7 8767 186 69 73 chr2 213787193 213788488 -36899366 + MER39-int LTR ERV1 2668 3967 -2364 2494 69 0 3 chr2 213788488 213788792 -36899062 - AluSg SINE Alu -7 303 1 8767 186 69 73 chr2 213788792 213789712 -36898142 + MER39-int LTR ERV1 3967 6167 -164 2356 149 105 34 chr2 213789781 213790407 -36897447 + MER39 LTR ERV1 1 707 0 21 0 0 0 chr2 213791824 213791845 -36896009 + AT_rich Low_complexity Low_complexity 1 21 0 1065 208 60 65 chr2 213791924 213792063 -36895791 + L1ME3 LINE L1 5812 5950 -212 2241 117 0 7 chr2 213792063 213792370 -36895484 + AluSx SINE Alu 1 305 -7 1065 208 60 65 chr2 213792370 213792585 -36895269 + L1ME3 LINE L1 5950 6162 0 2949 111 16 30 chr2 213792659 213792852 -36895002 + MSTB LTR MaLR 2 196 -230 2093 103 3 3 chr2 213792852 213793143 -36894711 + AluSg SINE Alu 1 291 -19 2949 111 16 30 chr2 213793143 213793380 -36894474 + MSTB LTR MaLR 196 426 0 325 202 0 114 chr2 213793905 213794019 -36893835 - LTR16A1 LTR ERVL -10 447 347 445 237 50 91 chr2 213794099 213794297 -36893557 - LTR16A1 LTR ERVL -264 193 4 2425 80 0 0 chr2 213794407 213794709 -36893145 + AluSg SINE Alu 1 302 -8 2195 109 23 0 chr2 213794709 213795011 -36892843 + AluSg1 SINE Alu 1 309 0 2345 70 6 22 chr2 213795188 213795501 -36892353 + AluSc SINE Alu 1 308 -1 1636 163 33 10 chr2 213795944 213796245 -36891609 - AluJo SINE Alu -4 308 1 476 269 53 12 chr2 213796337 213796508 -36891346 - LTR33 LTR ERVL -48 473 296 235 289 60 0 chr2 213796641 213796724 -36891130 - LTR33 LTR ERVL -433 88 1 1115 165 0 0 chr2 213796825 213797001 -36890853 + AluSg/x SINE Alu 132 307 -5 369 0 0 0 chr2 213797002 213797043 -36890811 + (CA)n Simple_repeat Simple_repeat 2 42 0 499 319 17 37 chr2 213797094 213797334 -36890520 - MIR SINE MIR -27 235 5 498 211 111 124 chr2 213797337 213797635 -36890219 + MARNA DNA Mariner 128 421 -165 3010 142 111 13 chr2 213797725 213797935 -36889919 - MER21A LTR ERV1 0 931 743 360 0 0 0 chr2 213797935 213797975 -36889879 + (CA)n Simple_repeat Simple_repeat 2 41 0 3010 142 111 13 chr2 213797975 213798509 -36889345 - MER21A LTR ERV1 -188 743 1 180 316 29 52 chr2 213798644 213798780 -36889074 + L2 LINE L2 3138 3270 -2 291 71 0 0 chr2 213800102 213800144 -36887710 + (TG)n Simple_repeat Simple_repeat 2 43 0 442 290 65 0 chr2 213800878 213801047 -36886807 - MIR3 SINE MIR -3 205 26 207 69 0 0 chr2 213801698 213801727 -36886127 + (TTA)n Simple_repeat Simple_repeat 3 31 0 1772 148 7 11 chr2 213801733 213802016 -36885838 - AluJb SINE Alu -30 282 1 338 102 0 0 chr2 213803707 213803756 -36884098 - Charlie8 DNA MER1_type -2284 133 85 350 279 82 16 chr2 213803788 213803910 -36883944 - MIR SINE MIR -9 253 124 2248 80 0 3 chr2 213804001 213804290 -36883564 + AluSc SINE Alu 1 288 -21 2222 107 0 0 chr2 213805458 213805748 -36882106 + AluSx SINE Alu 1 290 -22 189 0 0 0 chr2 213805751 213805772 -36882082 + (GA)n Simple_repeat Simple_repeat 2 22 0 1273 51 23 0 chr2 213805774 213805950 -36881904 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 200 121 30 0 chr2 213805950 213805983 -36881871 + A-rich Low_complexity Low_complexity 5 38 0 401 268 86 77 chr2 213806184 213806404 -36881450 + MER102a DNA MER1_type 98 319 -11 197 387 9 19 chr2 213806695 213806801 -36881053 + MIR3 SINE MIR 11 115 -93 2333 114 0 0 chr2 213807108 213807416 -36880438 - AluSx SINE Alu -4 308 1 25 31 0 0 chr2 213807472 213807504 -36880350 + AT_rich Low_complexity Low_complexity 1 32 0 1123 231 64 55 chr2 213807537 213807997 -36879857 + MER39 LTR ERV1 50 707 0 240 116 23 23 chr2 213808621 213808664 -36879190 - MER34B LTR ERV1 0 565 523 724 213 109 11 chr2 213808684 213808867 -36878987 + MER20 DNA MER1_type 11 211 -8 676 265 117 18 chr2 213810575 213810798 -36877056 - MIR SINE MIR 0 262 18 275 272 80 73 chr2 213811382 213811817 -36876037 + MLT1J LTR MaLR 36 506 -5 252 0 0 0 chr2 213813494 213813522 -36874332 + (A)n Simple_repeat Simple_repeat 1 28 0 236 340 10 0 chr2 213813695 213813795 -36874059 - MIR SINE MIR -1 261 161 26 64 0 0 chr2 213814011 213814058 -36873796 + AT_rich Low_complexity Low_complexity 1 47 0 1888 139 58 0 chr2 213814582 213814877 -36872977 + AluSx SINE Alu 1 312 0 383 201 140 46 chr2 213815673 213815728 -36872126 - L1ME3A LINE L1 -207 5963 5915 2130 131 0 20 chr2 213815728 213816056 -36871798 + AluSx SINE Alu 1 312 0 383 201 140 46 chr2 213816056 213816188 -36871666 - L1ME3A LINE L1 -255 5915 5762 230 293 28 66 chr2 213816278 213816490 -36871364 - L1ME3A LINE L1 -531 5639 5436 2738 42 0 0 chr2 213816525 213816835 -36871019 - AluY SINE Alu 0 311 2 2465 150 76 32 chr2 213816866 213817367 -36870487 + Charlie1b DNA MER1_type 1 523 0 223 344 56 33 chr2 213817413 213817593 -36870261 - MIR SINE MIR -6 256 73 554 247 75 14 chr2 213818086 213818232 -36869622 - MIR SINE MIR 0 262 108 326 151 0 0 chr2 213818324 213818377 -36869477 - MLT1D LTR MaLR 0 505 453 2219 162 22 96 chr2 213818411 213818662 -36869192 - MLT1D LTR MaLR -35 470 273 1739 148 27 20 chr2 213818662 213818959 -36868895 - AluJb SINE Alu -13 299 1 2219 162 22 96 chr2 213818959 213819207 -36868647 - MLT1D LTR MaLR -232 273 8 266 270 79 0 chr2 213819226 213819289 -36868565 - L2 LINE L2 -17 3255 3188 * 280 267 103 35 chr2 213819269 213819385 -36868469 - L2 LINE L2 -235 3037 2914 244 243 188 42 chr2 213819434 213819578 -36868276 - MER5B DNA MER1_type -13 165 1 1873 124 44 4 chr2 213819614 213819887 -36867967 + AluSx SINE Alu 1 284 -28 250 326 187 5 chr2 213819905 213820092 -36867762 - L2 LINE L2 -472 2842 2622 346 250 257 14 chr2 213820304 213820444 -36867410 + MIR SINE MIR 8 181 -81 235 187 53 27 chr2 213821249 213821324 -36866530 - L1MA10 LINE L1 -2 6332 6256 1551 176 34 24 chr2 213821550 213821845 -36866009 + AluJo SINE Alu 6 303 -9 26 64 0 0 chr2 213821902 213821949 -36865905 + AT_rich Low_complexity Low_complexity 1 47 0 855 293 32 12 chr2 213821980 213822226 -36865628 - MIR SINE MIR -10 252 2 240 271 17 0 chr2 213823068 213823127 -36864727 + GA-rich Low_complexity Low_complexity 3 62 0 309 254 133 28 chr2 213823433 213823614 -36864240 - MIR SINE MIR -1 261 62 727 253 54 27 chr2 213823686 213823907 -36863947 - MIR SINE MIR -35 227 1 2007 112 3 21 chr2 213824608 213824893 -36862961 + AluSx SINE Alu 16 295 -17 591 265 78 49 chr2 213825294 213825781 -36862073 - L1M4 LINE L1 -2911 3235 2735 240 263 13 0 chr2 213825996 213826072 -36861782 - L1M4 LINE L1 -3155 2991 2915 306 231 11 55 chr2 213826280 213826371 -36861483 + L2 LINE L2 3186 3272 0 2028 120 0 17 chr2 213826540 213826840 -36861014 - AluSx SINE Alu -16 296 2 2365 93 13 0 chr2 213826849 213827150 -36860704 - AluSx SINE Alu -7 305 1 1928 195 106 34 chr2 213827184 213827655 -36860199 - MLT1D LTR MaLR 0 505 1 891 65 0 0 chr2 213828345 213828453 -36859401 - AluSp/q SINE Alu -10 303 196 1835 179 3 3 chr2 213829142 213829449 -36858405 - AluJb SINE Alu -5 307 1 399 346 31 35 chr2 213829719 213829973 -36857881 + LTR16C LTR ERVL 237 489 -2 1720 153 60 23 chr2 213829984 213830285 -36857569 + AluJo SINE Alu 1 312 0 237 233 33 78 chr2 213830286 213830376 -36857478 + MLT1L LTR MaLR 332 417 -198 462 176 44 11 chr2 213830413 213830504 -36857350 + MLT1L LTR MaLR 508 601 -14 2247 103 0 13 chr2 213830505 213830807 -36857047 - AluSp SINE Alu -15 298 1 284 257 27 0 chr2 213831012 213831086 -36856768 + MLT1K LTR MaLR 510 585 -3 198 0 0 0 chr2 213831103 213831125 -36856729 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 364 153 111 0 chr2 213831356 213831428 -36856426 + MLT1E LTR MaLR 506 585 -8 613 243 97 39 chr2 213832220 213832375 -36855479 - MIR SINE MIR -25 237 66 1647 205 33 46 chr2 213832375 213832770 -36855084 - MLT1B LTR MaLR 0 390 1 613 243 97 39 chr2 213832770 213832820 -36855034 - MIR SINE MIR -196 66 20 889 228 185 16 chr2 213833176 213833479 -36854375 + LTR33A LTR ERVL 160 513 -10 1529 71 142 25 chr2 213833823 213834063 -36853791 + L1PA12 LINE L1 5901 6168 0 192 77 0 0 chr2 213834666 213834692 -36853162 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 1219 283 83 27 chr2 213836110 213836630 -36851224 + MLT1H LTR MaLR 1 549 0 237 114 0 0 chr2 213836725 213836760 -36851094 + Alu SINE Alu 2 36 -264 477 229 55 18 chr2 213836764 213836873 -36850981 + MLT1G1 LTR MaLR 483 595 0 2094 103 9 41 chr2 213836966 213837285 -36850569 + AluSq SINE Alu 2 310 -3 934 242 92 90 chr2 213837344 213837377 -36850477 + MLT1J LTR MaLR 6 37 -474 1524 153 44 72 chr2 213837377 213837698 -36850156 - AluJo SINE Alu 0 312 1 934 242 92 90 chr2 213837698 213837715 -36850139 + MLT1J LTR MaLR 37 52 -459 891 202 75 0 chr2 213837715 213837888 -36849966 + MER5A DNA MER1_type 1 186 -3 934 242 92 90 chr2 213837888 213838312 -36849542 + MLT1J LTR MaLR 52 482 -29 238 305 141 0 chr2 213838391 213838519 -36849335 + L2 LINE L2 3118 3263 -50 1077 128 21 5 chr2 213838752 213838935 -36848919 + L1MC3 LINE L1 7389 7575 -206 1063 154 17 69 chr2 213838935 213839140 -36848714 + L1MC2 LINE L1 6114 6307 -37 2247 110 7 0 chr2 213839140 213839439 -36848415 + AluSx SINE Alu 1 301 -11 1063 154 17 69 chr2 213839439 213839466 -36848388 + L1MC2 LINE L1 6307 6334 -10 240 198 42 125 chr2 213839474 213839570 -36848284 - MIR SINE MIR -44 218 131 1885 181 33 33 chr2 213840394 213840759 -36847095 + MLT1A1 LTR MaLR 1 365 0 2415 77 0 0 chr2 213840849 213841146 -36846708 + AluY SINE Alu 1 297 -14 977 184 12 6 chr2 213841151 213841314 -36846540 + FAM SINE Alu 1 164 -11 1673 256 97 39 chr2 213841442 213842334 -36845520 - L2 LINE L2 -8 3305 2359 1103 219 104 55 chr2 213842335 213842788 -36845066 + HsTC2 DNA Tc2 1204 1854 -44 390 274 34 0 chr2 213842817 213842934 -36844920 - MIR SINE MIR 0 262 142 1362 122 34 65 chr2 213844399 213844612 -36843242 + L1MA9 LINE L1 6054 6259 -53 1962 148 0 23 chr2 213844612 213844922 -36842932 - AluJo SINE Alu -5 307 5 1362 122 34 65 chr2 213844922 213844970 -36842884 + L1MA9 LINE L1 6259 6307 -5 974 197 87 0 chr2 213846285 213846539 -36841315 - MER5C DNA MER1_type 0 324 49 241 182 18 18 chr2 213846567 213846622 -36841232 + (CA)n Simple_repeat Simple_repeat 1 55 0 371 243 72 15 chr2 213847157 213847338 -36840516 + MLT1I LTR MaLR 138 394 -15 323 165 224 0 chr2 213847364 213847449 -36840405 - HAL1 LINE L1 -767 1740 1637 602 206 16 0 chr2 213847451 213847577 -36840277 - HAL1 LINE L1 -915 1592 1465 1412 229 158 10 chr2 213847774 213848285 -36839569 - HAL1 LINE L1 -1 2506 1920 351 322 43 0 chr2 213848302 213848417 -36839437 - HAL1 LINE L1 -1605 902 783 322 296 0 9 chr2 213848427 213848535 -36839319 + Zaphod DNA AcHobo 3910 4016 -15 301 210 0 116 chr2 213848558 213848696 -36839158 - HAL1 LINE L1 -2275 232 111 1843 174 0 17 chr2 213848704 213849174 -36838680 - MLT1D LTR MaLR 0 505 6 2257 113 3 10 chr2 213849190 213849499 -36838355 - AluSx SINE Alu -5 307 1 2242 126 7 0 chr2 213849719 213850029 -36837825 + AluSx SINE Alu 1 312 0 219 250 0 0 chr2 213850090 213850142 -36837712 + A-rich Low_complexity Low_complexity 5 56 0 194 206 0 0 chr2 213850377 213850411 -36837443 - MIR SINE MIR -67 141 108 512 326 20 0 chr2 213850731 213850878 -36836976 - L2 LINE L2 -7 3265 3116 1014 222 28 28 chr2 213851281 213851529 -36836325 + MIR SINE MIR 2 249 -13 2218 103 3 7 chr2 213851530 213851831 -36836023 - AluSg SINE Alu -10 300 1 3327 251 124 20 chr2 213852300 213853757 -36834097 - L2 LINE L2 -3 3310 1698 1782 144 7 24 chr2 213853897 213854189 -36833665 + AluJo SINE Alu 1 287 -25 27 0 0 0 chr2 213854197 213854224 -36833630 + AT_rich Low_complexity Low_complexity 1 27 0 271 308 145 0 chr2 213854404 213854521 -36833333 - L2 LINE L2 0 3272 3139 241 226 32 16 chr2 213854604 213854666 -36833188 - L1M4 LINE L1 -411 5773 5711 399 260 50 0 chr2 213854861 213854961 -36832893 + L2 LINE L2 3208 3312 -1 800 208 0 7 chr2 213855314 213855463 -36832391 + FAM SINE Alu 19 166 -19 204 97 0 0 chr2 213855656 213855687 -36832167 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 748 206 50 12 chr2 213856093 213856253 -36831601 - MIR SINE MIR -36 226 61 1308 201 80 22 chr2 213856276 213856600 -36831254 + MLT1A1 LTR MaLR 21 363 -2 346 294 18 73 chr2 213856659 213856768 -36831086 - L2 LINE L2 -4 3268 3166 1179 291 176 45 chr2 213856855 213858095 -36829759 - L2 LINE L2 -341 2973 1572 2399 78 0 7 chr2 213858230 213858539 -36829315 + AluSq SINE Alu 1 307 -6 350 289 118 45 chr2 213859896 213860142 -36827712 - L1M2 LINE L1 -5716 1133 870 36 62 0 0 chr2 213860162 213860226 -36827628 + GC_rich Low_complexity Low_complexity 1 64 0 1799 92 121 7 chr2 213861655 213861928 -36825926 + AluSg1 SINE Alu 1 304 -5 2267 90 7 0 chr2 213861974 213862263 -36825591 + AluSc SINE Alu 1 291 -18 1131 112 0 22 chr2 213862323 213862501 -36825353 - AluSq SINE Alu -3 310 137 461 235 22 123 chr2 213863395 213863574 -36824280 + MIR SINE MIR 14 174 -88 372 250 77 47 chr2 213863616 213863802 -36824052 + MIR SINE MIR 56 253 -9 1663 122 0 8 chr2 213863809 213864047 -36823807 - AluSg/x SINE Alu -5 307 72 21 0 0 0 chr2 213864088 213864109 -36823745 + AT_rich Low_complexity Low_complexity 1 21 0 413 306 89 38 chr2 213864395 213864630 -36823224 - L1MC4a LINE L1 -1802 6006 5760 1568 170 33 0 chr2 213865376 213865691 -36822163 - AluJo SINE Alu 0 327 4 2230 103 0 7 chr2 213865852 213866152 -36821702 + AluSq SINE Alu 1 298 -15 1949 154 0 0 chr2 213866289 213866581 -36821273 + AluSx SINE Alu 1 292 -20 1975 80 61 4 chr2 213866635 213866919 -36820935 - AluSc SINE Alu 0 299 1 2003 98 126 15 chr2 213867430 213867755 -36820099 - MER46B DNA MER2_type 0 236 1 1979 101 40 44 chr2 213868626 213868924 -36818930 - AluSx SINE Alu -15 297 1 382 213 0 0 chr2 213869648 213869709 -36818145 + Tigger3(Golem) DNA MER2_type 1 61 -2968 4266 116 88 75 chr2 213869733 213869940 -36817914 + Tigger3(Golem) DNA MER2_type 2150 2353 -676 1555 149 34 68 chr2 213869940 213870263 -36817591 + AluJb SINE Alu 1 312 0 4266 116 88 75 chr2 213870263 213870523 -36817331 + Tigger3(Golem) DNA MER2_type 2353 2608 -421 2202 107 3 0 chr2 213870523 213870814 -36817040 + AluSq SINE Alu 5 296 -17 4266 116 88 75 chr2 213870814 213871214 -36816640 + Tigger3(Golem) DNA MER2_type 2608 3029 0 3680 167 85 38 chr2 213871253 213872293 -36815561 - L1MB8 LINE L1 0 6178 5096 1266 214 66 30 chr2 213872549 213872881 -36814973 + MER2 DNA MER2_type 1 344 0 2043 101 22 11 chr2 213873180 213873485 -36814369 - AluSc SINE Alu 0 308 1 2032 89 52 0 chr2 213873489 213873786 -36814068 - AluY SINE Alu 0 311 1 4998 70 28 9 chr2 213874133 213874773 -36813081 - L1PA11 LINE L1 -2 6172 5521 2176 118 10 0 chr2 213874782 213875088 -36812766 - AluSx SINE Alu -3 309 1 2420 82 0 3 chr2 213875313 213875616 -36812238 - AluSp SINE Alu -11 302 1 512 146 79 0 chr2 213875912 213876001 -36811853 + L1MC1 LINE L1 6035 6130 -203 2130 127 6 13 chr2 213876026 213876340 -36811514 + AluSx SINE Alu 1 312 0 1890 128 20 24 chr2 213877512 213877810 -36810044 - AluSx SINE Alu -15 297 1 2116 114 4 0 chr2 213878050 213878331 -36809523 + AluSx SINE Alu 1 282 -30 216 220 0 20 chr2 213878777 213878827 -36809027 + (TATATG)n Simple_repeat Simple_repeat 1 49 0 709 137 0 0 chr2 213879178 213879280 -36808574 + AluY SINE Alu 5 106 -205 1915 114 46 0 chr2 213879297 213879577 -36808277 + AluY SINE Alu 15 307 -4 22 0 0 0 chr2 213879915 213879937 -36807917 + AT_rich Low_complexity Low_complexity 1 22 0 362 218 190 35 chr2 213880425 213880567 -36807287 + L2 LINE L2 3095 3258 -55 2285 91 3 7 chr2 213881342 213881649 -36806205 + AluY SINE Alu 1 306 -5 2267 62 7 42 chr2 213882188 213882497 -36805357 - AluSx SINE Alu -14 298 1 2242 118 0 0 chr2 213882644 213882950 -36804904 - AluSx SINE Alu -6 306 1 22 35 0 0 chr2 213884312 213884341 -36803513 + AT_rich Low_complexity Low_complexity 1 29 0 781 181 12 54 chr2 213884499 213884665 -36803189 + FRAM SINE Alu 1 153 -23 2055 138 0 3 chr2 213886436 213886733 -36801121 + AluSx SINE Alu 1 296 -16 268 201 136 52 chr2 213886960 213886982 -36800872 + L1ME4a LINE L1 5924 5943 -178 1897 106 88 3 chr2 213886982 213887265 -36800589 + AluY SINE Alu 1 307 -4 268 201 136 52 chr2 213887265 213887396 -36800458 + L1ME4a LINE L1 5943 6090 -31 292 250 74 28 chr2 213887442 213887550 -36800304 + L3 LINE CR1 1188 1300 -277 223 280 0 0 chr2 213887627 213887677 -36800177 - MER5A DNA MER1_type -136 53 4 265 327 72 95 chr2 213887801 213888225 -36799629 + L2 LINE L2 2256 2657 -657 2328 87 10 3 chr2 213888225 213888524 -36799330 - AluSq SINE Alu -12 301 1 265 327 72 95 chr2 213888524 213888836 -36799018 + L2 LINE L2 2657 2975 -339 222 330 80 0 chr2 213889035 213889123 -36798731 + L2 LINE L2 3168 3262 -10 188 277 0 46 chr2 213890825 213890890 -36796964 - L3b LINE CR1 0 1583 1522 714 300 158 49 chr2 213890952 213891466 -36796388 - L3 LINE CR1 -98 1479 910 295 348 43 0 chr2 213891773 213891865 -36795989 + MIR SINE MIR 20 115 -93 637 306 215 15 chr2 213892446 213892842 -36795012 - L2 LINE L2 0 3313 2839 945 248 109 36 chr2 213892848 213893243 -36794611 + Charlie7 DNA MER1_type 1875 2307 -305 2049 143 0 0 chr2 213893243 213893536 -36794318 + AluSx SINE Alu 1 293 -19 945 248 109 36 chr2 213893536 213893580 -36794274 + Charlie7 DNA MER1_type 2307 2346 -266 36 40 0 0 chr2 213893585 213893635 -36794219 + AT_rich Low_complexity Low_complexity 1 50 0 1692 137 61 24 chr2 213893825 213894118 -36793736 + AluJo SINE Alu 1 304 -8 1129 171 4 22 chr2 213894623 213894851 -36793003 - L1MC1 LINE L1 -13 6320 6097 628 242 62 36 chr2 213896213 213896407 -36791447 + MIR SINE MIR 63 261 -1 21 36 0 0 chr2 213896969 213896997 -36790857 + AT_rich Low_complexity Low_complexity 1 28 0 460 255 52 7 chr2 213898096 213898249 -36789605 + L1M4c LINE L1 1923 2082 -4302 1505 232 147 58 chr2 213898280 213899070 -36788784 - L1MC4a LINE L1 -1503 6305 5446 2207 80 20 10 chr2 213899343 213899644 -36788210 + AluSx SINE Alu 1 304 -8 562 135 0 34 chr2 213900809 213900898 -36786956 + AluJ/FLAM SINE Alu 1 86 -226 27 0 0 0 chr2 213900905 213900932 -36786922 + AT_rich Low_complexity Low_complexity 1 27 0 2214 101 3 0 chr2 213901528 213901825 -36786029 + AluSg SINE Alu 1 298 -12 365 230 111 44 chr2 213902061 213902196 -36785658 - L1M2 LINE L1 -477 5823 5680 1728 61 9 0 chr2 213902196 213902409 -36785445 + AluY SINE Alu 81 295 -16 1773 135 33 30 chr2 213903035 213903339 -36784515 + AluJo SINE Alu 1 305 -7 21 0 0 0 chr2 213904006 213904027 -36783827 + AT_rich Low_complexity Low_complexity 1 21 0 264 321 160 0 chr2 213904396 213904502 -36783352 - L2 LINE L2 -12 3301 3179 205 333 51 26 chr2 213905286 213905403 -36782451 + MIR3 SINE MIR 5 124 -84 603 165 0 0 chr2 213905564 213905681 -36782173 - FLAM_C SINE Alu 0 144 28 210 160 0 0 chr2 213905813 213905863 -36781991 + T-rich Low_complexity Low_complexity 1 50 0 25 65 0 0 chr2 213905962 213906008 -36781846 + AT_rich Low_complexity Low_complexity 1 46 0 28 48 0 0 chr2 213906317 213906359 -36781495 + AT_rich Low_complexity Low_complexity 1 42 0 300 215 108 46 chr2 213908077 213908207 -36779647 + MIR SINE MIR 88 225 -37 2065 133 10 0 chr2 213908374 213908667 -36779187 - AluSg SINE Alu -14 296 1 40 67 0 0 chr2 213908758 213908833 -36779021 + AT_rich Low_complexity Low_complexity 1 75 0 443 271 109 52 chr2 213909635 213909827 -36778027 - MIR SINE MIR -34 228 26 332 200 107 79 chr2 213910306 213910446 -36777408 - MLT1I LTR MaLR -26 383 240 24 85 0 0 chr2 213910850 213910909 -36776945 + AT_rich Low_complexity Low_complexity 1 59 0 2719 180 214 98 chr2 213911190 213911700 -36776154 - L1MD3 LINE L1 -17 8258 7809 559 170 0 11 chr2 213911700 213911794 -36776060 - MLT1F1 LTR MaLR -474 93 1 2719 180 214 98 chr2 213911794 213912283 -36775571 - L1MD3 LINE L1 -466 7809 7039 1230 144 16 0 chr2 213912283 213912499 -36775355 + AluSg/x SINE Alu 91 309 0 235 307 0 0 chr2 213912500 213912575 -36775279 + (TA)n Simple_repeat Simple_repeat 1 75 0 21 57 0 0 chr2 213912619 213912654 -36775200 + AT_rich Low_complexity Low_complexity 1 35 0 1345 150 0 0 chr2 213912661 213912861 -36774993 - MER2 DNA MER2_type -144 201 2 3133 228 111 33 chr2 213912868 213913987 -36773867 - L1MD3 LINE L1 -758 5668 5633 2055 108 10 20 chr2 213913987 213914283 -36773571 - AluSx SINE Alu -19 293 1 3133 228 111 33 chr2 213914283 213914557 -36773297 - L1MD3 LINE L1 -793 5633 5382 3493 196 96 40 chr2 213914597 213915704 -36772150 + L1M1 LINE L1 1483 2704 -4505 * 3536 143 79 7 chr2 213915678 213916500 -36771354 + L1M1 LINE L1 5706 6590 -743 3777 156 57 55 chr2 213916526 213916693 -36771161 + L1MA5 LINE L1 5457 5622 -678 2450 84 0 0 chr2 213916693 213917003 -36770851 + AluY SINE Alu 1 310 -1 3777 156 57 55 chr2 213917003 213917677 -36770177 + L1MA5 LINE L1 5622 6300 0 3129 214 76 22 chr2 213917684 213918663 -36769191 - L1MD3 LINE L1 -1053 5373 4343 2127 194 41 35 chr2 213918664 213919148 -36768706 - MLT1D LTR MaLR 0 505 19 2043 240 74 52 chr2 213919148 213920135 -36767719 - L1MD3 LINE L1 -2106 4320 3312 953 156 110 6 chr2 213920215 213920388 -36767466 - MER58A DNA MER1_type -6 218 28 1206 233 186 28 chr2 213920399 213921005 -36766849 - L1MD3 LINE L1 -3086 3340 2598 2172 120 0 19 chr2 213921005 213921314 -36766540 - AluSx SINE Alu -9 303 1 1206 233 186 28 chr2 213921314 213921459 -36766395 - L1MD3 LINE L1 -3828 2598 2477 331 262 86 1 chr2 213921480 213921628 -36766226 - L1MD3 LINE L1 -4489 2029 1785 1214 122 0 0 chr2 213971628 213971792 -36716062 + AluSc SINE Alu 137 300 -9 349 269 117 30 chr2 213971795 213971992 -36715862 + HAL1 LINE L1 1383 1596 -911 1979 176 0 0 chr2 213972011 213972323 -36715531 + AluJb SINE Alu 1 312 0 2437 93 6 0 chr2 213972325 213972636 -36715218 + AluSq SINE Alu 1 313 0 2878 0 0 3 chr2 213972987 213973292 -36714562 + AluYa5 SINE Alu 1 304 -7 822 226 25 30 chr2 213973752 213973987 -36713867 - MER96B DNA MER1_type? -180 237 4 230 284 55 0 chr2 213974167 213974276 -36713578 - MIR SINE MIR -100 162 48 1113 159 0 0 chr2 213974666 213974836 -36713018 - AluSg/x SINE Alu -8 302 133 2331 104 3 0 chr2 213974837 213975134 -36712720 - AluSx SINE Alu -14 298 1 1585 149 4 8 chr2 213975425 213975673 -36712181 + AluJo SINE Alu 1 247 -65 2206 113 3 0 chr2 213975960 213976253 -36711601 - AluSq SINE Alu -19 294 1 2155 121 3 0 chr2 213976651 213976933 -36710921 + AluSx SINE Alu 1 283 -29 207 0 0 0 chr2 213976933 213976956 -36710898 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 27 29 0 0 chr2 213977575 213977609 -36710245 + AT_rich Low_complexity Low_complexity 1 34 0 2391 107 0 0 chr2 213977860 213978170 -36709684 - AluSx SINE Alu -2 310 1 782 158 0 43 chr2 213980745 213980884 -36706970 - FLAM_A SINE Alu 0 133 1 1550 108 19 5 chr2 213981344 213981556 -36706298 + AluSg/x SINE Alu 80 294 -18 2155 92 20 20 chr2 213981592 213981887 -36705967 + AluSc SINE Alu 1 295 -14 1113 159 0 0 chr2 213981888 213982058 -36705796 + AluSg/x SINE Alu 133 302 -8 245 230 203 0 chr2 213982538 213982612 -36705242 + MLT1G LTR MaLR 223 311 -244 484 243 56 15 chr2 213982684 213982880 -36704974 + MLT1G LTR MaLR 344 538 -34 191 206 59 44 chr2 213985354 213985422 -36702432 + MER5B DNA MER1_type 1 69 -109 2355 107 0 7 chr2 213985707 213986015 -36701839 - AluSg SINE Alu -4 306 1 729 265 138 25 chr2 213986066 213986248 -36701606 + MLT1J LTR MaLR 1 228 -283 2132 115 13 22 chr2 213986248 213986422 -36701432 - AluSx SINE Alu -1 311 140 2049 118 0 33 chr2 213986422 213986728 -36701126 - AluSg SINE Alu -14 296 1 2132 115 13 22 chr2 213986728 213986867 -36700987 - AluSx SINE Alu -172 140 1 729 265 138 25 chr2 213986867 213986967 -36700887 + MLT1J LTR MaLR 228 315 -196 230 316 43 58 chr2 213986981 213987120 -36700734 + L2 LINE L2 3136 3272 0 2336 100 0 0 chr2 213987305 213987605 -36700249 + AluSx SINE Alu 1 300 -12 766 150 14 7 chr2 213987785 213987925 -36699929 - L1PA15 LINE L1 0 6165 6025 807 104 0 0 chr2 213987925 213988031 -36699823 - U6 snRNA snRNA -1 106 1 2011 129 7 0 chr2 213988346 213988632 -36699222 - AluSx SINE Alu -24 288 1 2312 98 3 0 chr2 213988639 213988936 -36698918 - AluSx SINE Alu -14 298 1 2366 75 17 0 chr2 213988949 213989242 -36698612 - AluSp SINE Alu -15 298 1 240 161 0 81 chr2 213989285 213989347 -36698507 + MER5B DNA MER1_type 13 69 -109 950 104 7 7 chr2 213989409 213989544 -36698310 + AluSg SINE Alu 1 135 -175 2349 75 14 3 chr2 213989644 213989939 -36697915 - AluSg SINE Alu -12 298 1 401 277 72 64 chr2 213990107 213990356 -36697498 - HAL1 LINE L1 -867 1640 1390 1282 205 93 7 chr2 213990768 213991046 -36696808 - AluJo SINE Alu -10 302 1 373 124 0 5 chr2 213991956 213992023 -36695831 + Alu SINE Alu 1 46 -255 2332 112 0 0 chr2 213992129 213992469 -36695385 + AluSx SINE Alu 1 340 0 2190 110 0 0 chr2 213993378 213993682 -36694172 + AluSg SINE Alu 1 304 0 2423 99 0 0 chr2 213993780 213994083 -36693771 + AluSc SINE Alu 1 303 -6 186 133 0 0 chr2 213994095 213994125 -36693729 + (CTATA)n Simple_repeat Simple_repeat 2 31 0 192 97 0 0 chr2 213994650 213994681 -36693173 + (CAGAGA)n Simple_repeat Simple_repeat 1 31 0 2377 97 0 0 chr2 213994692 213994991 -36692863 - AluSg SINE Alu -11 299 1 2436 70 3 7 chr2 213995477 213995777 -36692077 - AluY SINE Alu -12 299 1 520 46 0 0 chr2 213995794 213995859 -36691995 + MADE1 DNA Mariner 1 65 -15 2433 84 3 0 chr2 213995981 213996278 -36691576 - AluSg SINE Alu -12 298 1 23 0 0 0 chr2 213997891 213997914 -36689940 + GC_rich Low_complexity Low_complexity 1 23 0 370 266 23 31 chr2 213998935 213999063 -36688791 + L1ME1 LINE L1 5929 6055 -111 2224 115 0 3 chr2 213999266 213999562 -36688292 + AluSx SINE Alu 1 295 -17 22 35 0 0 chr2 214000108 214000137 -36687717 + AT_rich Low_complexity Low_complexity 1 29 0 867 107 8 15 chr2 214000243 214000374 -36687480 + AluSg/x SINE Alu 176 305 -5 1080 137 80 0 chr2 214000932 214000980 -36686874 - AluJo SINE Alu -123 189 146 237 65 0 0 chr2 214000980 214001011 -36686843 + (TG)n Simple_repeat Simple_repeat 2 32 0 1080 137 80 0 chr2 214001011 214001137 -36686717 - AluJo SINE Alu -166 146 1 1630 59 118 0 chr2 214001220 214001424 -36686430 - AluY SINE Alu -83 228 1 567 308 14 61 chr2 214001598 214001877 -36685977 + MER102b DNA MER1_type 57 322 -19 1001 85 0 0 chr2 214002535 214002665 -36685189 - AluSc SINE Alu -4 305 176 2159 124 0 7 chr2 214002881 214003180 -36684674 - AluSg SINE Alu -13 297 1 2239 101 0 3 chr2 214003486 214003782 -36684072 + AluSg SINE Alu 1 295 -15 2353 103 3 0 chr2 214004401 214004703 -36683151 + AluSx SINE Alu 1 303 -9 2071 111 10 14 chr2 214005934 214006222 -36681632 - AluSg SINE Alu -13 297 11 196 30 61 0 chr2 214009666 214009699 -36678155 + (TA)n Simple_repeat Simple_repeat 1 35 0 2241 103 31 0 chr2 214011343 214011633 -36676221 + AluSp SINE Alu 1 299 -14 498 252 53 15 chr2 214011739 214011870 -36675984 + MIR SINE MIR 9 144 -118 286 346 0 10 chr2 214011993 214012097 -36675757 - MER5A DNA MER1_type -4 185 83 221 277 79 40 chr2 214012012 214012113 -36675741 + MER5A DNA MER1_type 35 139 -50 * 872 169 225 0 chr2 214012121 214012334 -36675520 - L1MD3 LINE L1 -5 7990 7730 204 276 13 26 chr2 214012334 214012410 -36675444 - MER5A DNA MER1_type -114 75 1 180 0 0 0 chr2 214013259 214013279 -36674575 + (T)n Simple_repeat Simple_repeat 1 20 0 1557 93 0 0 chr2 214013293 214013486 -36674368 - AluSx SINE Alu -119 193 1 2321 85 0 0 chr2 214013971 214014252 -36673602 + AluSc SINE Alu 6 286 -23 1444 104 0 0 chr2 214014259 214014451 -36673403 + AluSg/x SINE Alu 121 312 0 252 176 103 0 chr2 214014842 214014910 -36672944 + MER116 DNA Mariner 1 75 -5 939 143 0 0 chr2 214015314 214015447 -36672407 - AluSq/x SINE Alu -179 133 1 699 97 0 0 chr2 214016461 214016554 -36671300 + Alu SINE Alu 210 302 -9 2156 101 0 39 chr2 214016866 214017174 -36670680 - AluSq SINE Alu -17 296 1 791 176 0 22 chr2 214017178 214017314 -36670540 - FLAM_A SINE Alu 0 133 1 335 150 67 0 chr2 214018358 214018418 -36669436 + AluJ SINE Alu 65 128 -174 2290 104 0 0 chr2 214018791 214019098 -36668756 + AluSq SINE Alu 1 307 -6 618 193 68 62 chr2 214019101 214019287 -36668567 + AluJ SINE Alu 122 308 0 282 225 28 0 chr2 214019315 214019386 -36668468 + L1ME LINE L1 5673 5745 -376 34 42 0 0 chr2 214019524 214019572 -36668282 + AT_rich Low_complexity Low_complexity 1 48 0 1671 201 7 3 chr2 214020361 214020664 -36667190 - AluJo SINE Alu -8 304 1 915 201 0 18 chr2 214020689 214020858 -36666996 - FAM SINE Alu -9 166 1 886 161 0 35 chr2 214020976 214021150 -36666704 + FAM SINE Alu 1 49 0 22 0 0 0 chr2 214022400 214022422 -36665432 + AT_rich Low_complexity Low_complexity 1 22 0 2000 91 58 7 chr2 214022713 214022988 -36664866 - AluSx SINE Alu -10 302 14 2036 113 28 3 chr2 214023213 214023496 -36664358 - AluSx SINE Alu -17 295 6 1979 119 6 61 chr2 214023713 214023889 -36663965 - AluSx SINE Alu -17 295 142 2610 47 3 0 chr2 214023889 214024188 -36663666 - AluSp SINE Alu -13 300 1 1979 119 6 61 chr2 214024188 214024323 -36663531 - AluSx SINE Alu -170 142 1 240 35 0 0 chr2 214027837 214027866 -36659988 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 2189 114 0 35 chr2 214027916 214028232 -36659622 + AluSg SINE Alu 1 305 -5 600 40 0 0 chr2 214028783 214028857 -36658997 - AluSp/q SINE Alu -15 298 225 2797 195 93 45 chr2 214028958 214029158 -36658696 + L1MC1 LINE L1 5472 5661 -672 2008 163 0 0 chr2 214029158 214029453 -36658401 + AluJb SINE Alu 5 299 -13 364 173 0 55 chr2 214029453 214029580 -36658274 + G-rich Low_complexity Low_complexity 3 122 0 2797 195 93 45 chr2 214029580 214029628 -36658226 + L1MC1 LINE L1 5661 5705 -628 1744 160 10 0 chr2 214029628 214029916 -36657938 + AluSx SINE Alu 1 291 -21 2797 195 93 45 chr2 214029916 214030347 -36657507 + L1MC1 LINE L1 5705 6324 -9 2204 91 3 3 chr2 214030348 214030645 -36657209 + AluSp SINE Alu 1 297 -16 31 44 0 0 chr2 214030925 214030970 -36656884 + AT_rich Low_complexity Low_complexity 1 45 0 214 0 111 0 chr2 214031244 214031280 -36656574 + T-rich Low_complexity Low_complexity 1 40 0 1033 33 0 0 chr2 214031282 214031403 -36656451 - AluY SINE Alu -33 278 158 2126 92 7 30 chr2 214031451 214031755 -36656099 - AluSx SINE Alu -15 297 1 25 0 0 0 chr2 214032247 214032272 -36655582 + AT_rich Low_complexity Low_complexity 1 25 0 2270 82 10 0 chr2 214032792 214033096 -36654758 - AluY SINE Alu -3 308 2 383 311 62 6 chr2 214033165 214033326 -36654528 + L1ME4a LINE L1 5456 5625 -496 225 232 0 0 chr2 214033381 214033437 -36654417 + L1ME4a LINE L1 5990 6045 -76 23 0 0 0 chr2 214033439 214033462 -36654392 + AT_rich Low_complexity Low_complexity 1 23 0 2087 123 0 0 chr2 214033523 214033831 -36654023 + AluSx SINE Alu 1 308 -4 1220 78 30 249 chr2 214034280 214034641 -36653213 + AluSq SINE Alu 1 282 -31 1005 106 0 0 chr2 214034643 214034785 -36653069 + AluSg/x SINE Alu 164 305 -7 293 275 0 0 chr2 214034798 214034867 -36652987 + MIR3 SINE MIR 137 205 -3 2124 113 3 0 chr2 214034913 214035206 -36652648 + AluSq SINE Alu 1 294 -19 293 324 63 14 chr2 214035302 214035444 -36652410 + MIR SINE MIR 108 256 -6 1481 156 35 35 chr2 214035871 214036160 -36651694 + AluJo SINE Alu 1 289 -23 2054 91 7 14 chr2 214036226 214036541 -36651313 + AluSq SINE Alu 3 315 0 189 0 0 0 chr2 214037303 214037324 -36650530 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 880 98 0 0 chr2 214037509 214037631 -36650223 - AluSg/x SINE Alu -17 295 174 331 210 102 69 chr2 214037749 214037882 -36649972 + MIR3 SINE MIR 70 206 -2 22 0 0 0 chr2 214038557 214038579 -36649275 + AT_rich Low_complexity Low_complexity 1 22 0 2552 34 0 0 chr2 214038617 214038913 -36648941 - AluY SINE Alu -15 296 1 421 139 81 0 chr2 214039310 214039396 -36648458 - Charlie1a DNA MER1_type -47 1408 1316 562 155 10 10 chr2 214039420 214039517 -36648337 - MER20 DNA MER1_type -4 215 119 3668 184 112 81 chr2 214039557 214039711 -36648143 - Charlie1a DNA MER1_type -1487 1274 1126 332 123 0 41 chr2 214039711 214039784 -36648070 - L1PA16 LINE L1 0 6166 6097 3668 184 112 81 chr2 214039784 214039907 -36647947 - Charlie1a DNA MER1_type -1635 1126 1008 2229 99 3 6 chr2 214039907 214040219 -36647635 - AluSx SINE Alu -1 311 1 3668 184 112 81 chr2 214040219 214040410 -36647444 - Charlie1a DNA MER1_type -1753 1008 824 2023 143 3 3 chr2 214040410 214040718 -36647136 - AluSx SINE Alu -4 308 1 3668 184 112 81 chr2 214040718 214040917 -36646937 - Charlie1a DNA MER1_type -1937 824 633 1974 122 10 16 chr2 214040917 214041228 -36646626 - AluSx SINE Alu -3 309 1 3668 184 112 81 chr2 214041228 214041793 -36646061 - Charlie1a DNA MER1_type -2128 633 1 339 221 192 19 chr2 214042525 214042629 -36645225 - MER3 DNA MER1_type -87 122 48 344 222 42 44 chr2 214042630 214042672 -36645182 + Charlie2 DNA MER1_type 2384 2425 -437 2351 58 7 0 chr2 214042672 214042963 -36644891 + AluY SINE Alu 1 293 -18 344 222 42 44 chr2 214042963 214043176 -36644678 + Charlie2 DNA MER1_type 2425 2680 -182 2187 98 0 3 chr2 214043263 214043560 -36644294 + AluSg SINE Alu 1 296 -14 2275 97 0 0 chr2 214043567 214043867 -36643987 + AluSq SINE Alu 1 300 -13 792 181 0 8 chr2 214045167 214045300 -36642554 + FLAM_A SINE Alu 1 132 -1 200 216 0 0 chr2 214045458 214045495 -36642359 - L2 LINE L2 -8 3305 3269 262 0 53 0 chr2 214045505 214045543 -36642311 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 504 150 160 10 chr2 214045546 214045646 -36642208 - AluSq/x SINE Alu -187 125 11 649 286 226 24 chr2 214045646 214045927 -36641927 - L2 LINE L2 -56 3257 3034 189 0 0 0 chr2 214045927 214045948 -36641906 + (TG)n Simple_repeat Simple_repeat 2 22 0 649 286 226 24 chr2 214045948 214046051 -36641803 - L2 LINE L2 -279 3034 2953 1684 125 14 31 chr2 214046051 214046368 -36641486 - AluSx SINE Alu 0 312 1 649 286 226 24 chr2 214046368 214046720 -36641134 - L2 LINE L2 -360 2953 2365 1607 178 24 0 chr2 214047409 214047696 -36640158 - AluJb SINE Alu -18 294 1 243 229 0 43 chr2 214047911 214047981 -36639873 + L1P3 LINE L1 705 771 -5104 1488 174 4 15 chr2 214048284 214048554 -36639300 + AluJb SINE Alu 31 297 -15 21 57 0 0 chr2 214049001 214049036 -36638818 + AT_rich Low_complexity Low_complexity 1 35 0 2267 70 10 0 chr2 214049270 214049569 -36638285 + AluY SINE Alu 1 302 -9 494 294 61 68 chr2 214049685 214049995 -36637859 + L1M4 LINE L1 4762 5069 -1077 252 0 0 0 chr2 214049995 214050023 -36637831 + (TA)n Simple_repeat Simple_repeat 2 29 0 2056 113 0 0 chr2 214050262 214050554 -36637300 - AluSx SINE Alu -16 296 5 183 42 0 0 chr2 214050576 214050600 -36637254 + (A)n Simple_repeat Simple_repeat 1 24 0 244 229 29 86 chr2 214050604 214050674 -36637180 - MIR SINE MIR -118 144 79 2212 85 13 0 chr2 214050774 214051081 -36636773 - AluY SINE Alu 0 311 1 239 238 150 12 chr2 214051082 214051162 -36636692 + MIR SINE MIR 169 259 -3 31 0 0 0 chr2 214052100 214052131 -36635723 + GC_rich Low_complexity Low_complexity 1 31 0 1184 73 0 24 chr2 214053212 214053377 -36634477 - AluSg/x SINE Alu -20 290 130 780 125 33 0 chr2 214053377 214053497 -36634357 + AluJo/FRAM SINE Alu 176 299 -13 21 57 0 0 chr2 214053542 214053577 -36634277 + AT_rich Low_complexity Low_complexity 1 35 0 848 134 5 157 chr2 214053615 214053740 -36634114 - MER5A DNA MER1_type -3 186 105 1475 167 30 7 chr2 214053740 214054030 -36633824 - AluJb SINE Alu 0 302 7 848 134 5 157 chr2 214054030 214054120 -36633734 - MER5A DNA MER1_type -84 105 3 22 35 0 0 chr2 214055550 214055579 -36632275 + AT_rich Low_complexity Low_complexity 1 29 0 2268 85 0 3 chr2 214055615 214055920 -36631934 + AluSx SINE Alu 1 304 -8 2045 105 17 0 chr2 214056114 214056409 -36631445 - AluSx SINE Alu -12 300 1 231 280 180 10 chr2 214057399 214057499 -36630355 - L2 LINE L2 -4 3309 3193 347 265 157 54 chr2 214057588 214057792 -36630062 - MIR SINE MIR -10 252 28 235 298 95 0 chr2 214058169 214058253 -36629601 - MIR SINE MIR -84 124 33 21 36 0 0 chr2 214059017 214059045 -36628809 + GC_rich Low_complexity Low_complexity 1 28 0 301 215 172 92 chr2 214059729 214059783 -36628071 - MIR SINE MIR -11 251 203 2150 68 24 0 chr2 214059783 214060077 -36627777 - AluSg SINE Alu -9 301 1 301 215 172 92 chr2 214060077 214060185 -36627669 - MIR SINE MIR -59 203 76 204 182 0 0 chr2 214060265 214060298 -36627556 - MIR SINE MIR -187 75 43 831 114 0 16 chr2 214061108 214061231 -36626623 + FLAM_C SINE Alu 1 121 -12 4653 89 3 17 chr2 214061605 214062134 -36625720 + MER41B LTR ERV1 1 521 -114 1712 143 16 22 chr2 214062134 214062448 -36625406 - AluSx SINE Alu 0 312 1 4653 89 3 17 chr2 214062448 214062560 -36625294 + MER41B LTR ERV1 521 633 -2 793 172 0 15 chr2 214062694 214062828 -36625026 + FLAM_C SINE Alu 2 133 0 1251 117 9 22 chr2 214063055 214063277 -36624577 + L1MA8 LINE L1 6073 6291 0 1683 167 13 20 chr2 214063337 214063643 -36624211 - AluJo SINE Alu -8 304 1 212 294 0 0 chr2 214063698 214063749 -36624105 + (TCCA)n Simple_repeat Simple_repeat 2 52 0 1969 124 3 7 chr2 214063992 214064291 -36623563 + AluSx SINE Alu 1 298 -14 753 276 43 9 chr2 214064579 214064789 -36623065 + MIR SINE MIR 46 262 0 330 221 81 23 chr2 214065358 214065444 -36622410 - MER5B DNA MER1_type 0 178 88 222 257 171 0 chr2 214065360 214065465 -36622389 + MER5A DNA MER1_type 17 139 -50 * 437 271 115 41 chr2 214065777 214065899 -36621955 - MIR SINE MIR -16 246 134 1662 128 13 61 chr2 214065899 214066211 -36621643 + AluJo SINE Alu 1 297 -15 437 271 115 41 chr2 214066211 214066306 -36621548 - MIR SINE MIR -128 134 13 243 246 73 55 chr2 214066622 214066732 -36621122 - L2 LINE L2 -5 3267 3156 1930 152 3 0 chr2 214066840 214067149 -36620705 - AluJb SINE Alu -2 310 1 258 105 35 53 chr2 214067487 214067539 -36620315 - MLT1J LTR MaLR -355 156 105 710 187 24 8 chr2 214067539 214067662 -36620192 - FLAM_A SINE Alu -8 125 1 836 126 46 13 chr2 214067961 214068112 -36619742 - BC200 scRNA scRNA -44 156 1 2350 66 23 0 chr2 214068528 214068831 -36619023 - AluY SINE Alu -1 310 1 1343 124 0 14 chr2 214068847 214069056 -36618798 - AluJb SINE Alu 0 312 107 1334 186 20 4 chr2 214069056 214069303 -36618551 + MLT1G LTR MaLR 338 588 -2 673 103 0 0 chr2 214069868 214069955 -36617899 + AluS SINE Alu 2 88 -225 1035 154 0 0 chr2 214069960 214070122 -36617732 - AluSg/x SINE Alu -23 289 128 609 170 0 0 chr2 214070122 214070228 -36617626 + L1PA16 LINE L1 6040 6145 -21 829 229 26 5 chr2 214070355 214070547 -36617307 - MIR SINE MIR -3 259 64 291 250 42 14 chr2 214070727 214070799 -36617055 - MIR3 SINE MIR -26 182 109 1065 263 109 53 chr2 214071917 214072404 -36615450 + MLT1H LTR MaLR 25 538 -11 268 243 144 36 chr2 214072488 214072599 -36615255 + MIR3 SINE MIR 1 123 -85 898 158 0 0 chr2 214072757 214072903 -36614951 + AluJb SINE Alu 156 301 -11 193 311 108 0 chr2 214073323 214073397 -36614457 - L2 LINE L2 0 3272 3191 1237 163 104 8 chr2 214073477 214073717 -36614137 + AluJo SINE Alu 1 263 -49 675 191 0 0 chr2 214073717 214073864 -36613990 + (CA)n Simple_repeat Simple_repeat 2 148 0 305 250 0 0 chr2 214073874 214073934 -36613920 - MIR SINE MIR -64 144 85 191 311 80 58 chr2 214074006 214074231 -36613623 - L2 LINE L2 -374 2940 2711 2117 97 7 0 chr2 214074781 214075069 -36612785 + AluSg SINE Alu 1 290 -20 1004 149 0 18 chr2 214075564 214075732 -36612122 + AluSg/x SINE Alu 129 293 -17 361 166 0 2 chr2 214075751 214075818 -36612036 + MIR SINE MIR 91 157 -51 261 0 0 0 chr2 214075829 214075858 -36611996 + (TTAAA)n Simple_repeat Simple_repeat 5 33 0 254 286 12 0 chr2 214075915 214075999 -36611855 + L1ME4a LINE L1 5835 5919 -202 186 261 0 22 chr2 214076141 214076187 -36611667 + MIR SINE MIR 216 260 -2 1025 166 28 38 chr2 214076464 214076561 -36611293 - MER58A DNA MER1_type -2211 209 113 1348 208 126 44 chr2 214076561 214076584 -36611270 - MER31B LTR ERV1 0 466 446 1670 182 3 0 chr2 214076584 214076881 -36610973 - AluJb SINE Alu -14 298 1 1348 208 126 44 chr2 214076881 214077286 -36610568 - MER31B LTR ERV1 -20 446 3 1025 166 28 38 chr2 214077286 214077399 -36610455 - MER58A DNA MER1_type -2307 113 1 312 172 62 0 chr2 214077414 214077478 -36610376 - Charlie5 DNA MER1_type -34 2578 2511 2124 109 3 10 chr2 214077493 214077805 -36610049 - AluSq SINE Alu -3 310 1 1387 109 0 14 chr2 214078001 214078212 -36609642 - AluSg/x SINE Alu -3 307 100 1355 103 0 5 chr2 214078348 214078542 -36609312 + AluSg/x SINE Alu 117 309 -3 644 109 0 0 chr2 214078553 214078645 -36609209 + AluY SINE Alu 2 93 -218 1871 121 4 0 chr2 214078687 214078960 -36608894 - AluSx SINE Alu -13 299 26 1085 90 28 0 chr2 214079967 214080111 -36607743 - AluSg/x SINE Alu -13 299 152 22 35 0 0 chr2 214080520 214080549 -36607305 + AT_rich Low_complexity Low_complexity 1 29 0 298 302 101 27 chr2 214080832 214080981 -36606873 - MIR3 SINE MIR -12 196 37 2328 84 7 13 chr2 214081061 214081360 -36606494 + AluSq SINE Alu 1 297 -16 2391 75 24 0 chr2 214081579 214081872 -36605982 + AluSp SINE Alu 1 300 -13 2385 93 3 6 chr2 214081874 214082185 -36605669 + AluSp SINE Alu 1 310 -3 343 127 55 0 chr2 214082273 214082328 -36605526 - MADE1 DNA Mariner 0 80 23 1192 150 24 28 chr2 214082543 214082756 -36605098 + MER20 DNA MER1_type 1 212 -7 2307 115 0 0 chr2 214083170 214083474 -36604380 - AluSx SINE Alu -8 304 1 2194 82 7 7 chr2 214083512 214083794 -36604060 - AluSx SINE Alu -30 282 1 369 274 38 45 chr2 214084706 214084863 -36602991 - MIR SINE MIR -70 192 37 387 257 41 18 chr2 214084924 214085095 -36602759 + MIR3 SINE MIR 1 175 -33 282 277 32 85 chr2 214085187 214085355 -36602499 - MIR SINE MIR -14 248 89 890 181 55 169 chr2 214085355 214085681 -36602173 - MLT1B LTR MaLR -3 387 122 2255 82 28 3 chr2 214085681 214085972 -36601882 - AluSq SINE Alu -15 298 1 890 181 55 169 chr2 214085972 214086082 -36601772 - MLT1B LTR MaLR -268 122 1 282 277 32 85 chr2 214086082 214086101 -36601753 - MIR SINE MIR -173 89 71 2099 127 0 10 chr2 214086735 214087034 -36600820 + AluSx SINE Alu 9 304 -8 200 217 0 0 chr2 214088099 214088145 -36599709 + (TA)n Simple_repeat Simple_repeat 1 46 0 204 167 24 0 chr2 214089185 214089227 -36598627 + (TA)n Simple_repeat Simple_repeat 1 43 0 920 124 0 7 chr2 214092565 214092702 -36595152 + AluSq/x SINE Alu 1 136 -177 2271 111 3 3 chr2 214092702 214093000 -36594854 + AluSx SINE Alu 1 298 -14 627 190 99 0 chr2 214094193 214094314 -36593540 + FLAM_A SINE Alu 1 133 0 800 161 0 8 chr2 214094425 214094555 -36593299 + FLAM_C SINE Alu 1 129 -14 1961 103 0 11 chr2 214095145 214095416 -36592438 + AluSx SINE Alu 42 309 -3 401 282 17 8 chr2 214096518 214096635 -36591219 + MER5B DNA MER1_type 60 177 -1 1289 99 0 0 chr2 214097122 214097284 -36590570 + AluSx SINE Alu 3 164 -148 2421 86 3 0 chr2 214097412 214097713 -36590141 + AluSq SINE Alu 2 303 -10 2693 142 63 26 chr2 214097794 214098075 -36589779 - MER41E LTR ERV1 0 512 204 1943 152 3 3 chr2 214098075 214098372 -36589482 - AluSx SINE Alu -15 297 1 2693 142 63 26 chr2 214098372 214098584 -36589270 - MER41E LTR ERV1 -308 204 1 1042 207 10 0 chr2 214098898 214099096 -36588758 - MER3 DNA MER1_type -8 201 2 2508 82 0 3 chr2 214099535 214099841 -36588013 + AluSc SINE Alu 1 305 -4 2176 77 46 11 chr2 214099919 214100204 -36587650 + AluSc SINE Alu 1 295 -14 547 195 9 18 chr2 214100243 214100356 -36587498 - MER45A DNA AcHobo 0 178 67 208 357 111 8 chr2 214100394 214100629 -36587225 - L2 LINE L2 -462 2852 2594 1356 80 0 0 chr2 214101563 214101726 -36586128 + AluSp SINE Alu 130 292 -21 2110 107 0 53 chr2 214101840 214102159 -36585695 - AluSx SINE Alu -10 302 1 201 237 0 0 chr2 214103281 214103340 -36584514 + CT-rich Low_complexity Low_complexity 122 180 0 198 91 0 0 chr2 214103397 214103430 -36584424 + (T)n Simple_repeat Simple_repeat 1 33 0 186 43 0 0 chr2 214103661 214103684 -36584170 + (GGA)n Simple_repeat Simple_repeat 2 24 0 759 186 0 0 chr2 214104410 214104534 -36583320 - AluJb SINE Alu -187 125 2 2396 83 0 3 chr2 214104971 214105271 -36582583 - AluY SINE Alu -12 299 1 752 124 0 0 chr2 214105281 214105394 -36582460 - AluSp/q SINE Alu -2 311 199 350 94 30 0 chr2 214105495 214105564 -36582290 + Alu SINE Alu 244 294 -8 280 164 15 0 chr2 214105738 214105805 -36582049 + L1ME4a LINE L1 6049 6116 -5 198 301 121 0 chr2 214106352 214106435 -36581419 + MIR3 SINE MIR 110 202 -6 2249 96 7 0 chr2 214107880 214108171 -36579683 + AluSx SINE Alu 1 293 -19 938 200 77 106 chr2 214108702 214109107 -36578747 - MSTD LTR MaLR -3 393 1 2325 93 0 7 chr2 214109701 214110003 -36577851 + AluSc SINE Alu 1 300 -9 2286 97 0 13 chr2 214110282 214110593 -36577261 + AluSq SINE Alu 1 307 -6 644 279 68 20 chr2 214110689 214110940 -36576914 + Charlie2 DNA MER1_type 81 343 -2439 267 194 16 16 chr2 214110942 214111004 -36576850 + Charlie2 DNA MER1_type 2799 2860 -2 321 281 214 5 chr2 214111018 214111228 -36576626 + MIR SINE MIR 2 255 -7 885 177 49 10 chr2 214111488 214111691 -36576163 + L1PA16 LINE L1 5956 6166 0 240 225 70 14 chr2 214111906 214111977 -36575877 + L2 LINE L2 3227 3301 -12 2158 94 29 0 chr2 214111984 214112261 -36575593 + AluSq SINE Alu 14 298 -15 2135 103 0 0 chr2 214112280 214112552 -36575302 + AluSx SINE Alu 1 272 -40 2123 115 7 20 chr2 214112609 214112905 -36574949 - AluSx SINE Alu -20 292 1 745 193 33 17 chr2 214113081 214113262 -36574592 - L1MC5 LINE L1 -53 7908 7725 26 64 0 0 chr2 214113295 214113342 -36574512 + AT_rich Low_complexity Low_complexity 1 47 0 4059 138 138 91 chr2 214113888 214114038 -36573816 + L1MC3 LINE L1 6707 6849 -936 207 0 0 0 chr2 214114038 214114061 -36573793 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 4059 138 138 91 chr2 214114061 214114314 -36573540 + L1MC3 LINE L1 6849 7089 -696 316 203 0 16 chr2 214114314 214114378 -36573476 + MLT1F1 LTR MaLR 49 111 -456 4059 138 138 91 chr2 214114378 214114935 -36572919 + L1MC3 LINE L1 7089 7779 -6 3207 182 48 6 chr2 214114974 214115634 -36572220 - L1MC2 LINE L1 0 6344 5657 1701 247 32 7 chr2 214115634 214116099 -36571755 - L1M4 LINE L1 -3257 2889 2413 2346 205 96 12 chr2 214116266 214116955 -36570899 - L1MC2 LINE L1 -2558 3588 2842 351 0 0 0 chr2 214116965 214117004 -36570850 + (TG)n Simple_repeat Simple_repeat 2 40 0 1217 137 0 0 chr2 214117009 214117170 -36570684 - AluSg/x SINE Alu -19 291 131 419 157 121 0 chr2 214117193 214117276 -36570578 - L1MC2 LINE L1 -3335 2811 2719 1894 139 20 14 chr2 214117314 214117609 -36570245 - AluSq SINE Alu -16 297 1 2793 137 26 16 chr2 214117619 214117953 -36569901 - L1MB7 LINE L1 -16 6168 5826 2459 86 3 3 chr2 214117953 214118266 -36569588 - AluSp SINE Alu 0 313 1 2793 137 26 16 chr2 214118266 214118422 -36569432 - L1MB7 LINE L1 -358 5826 5673 2267 108 3 0 chr2 214118428 214118725 -36569129 - AluSx SINE Alu -14 298 1 492 130 0 0 chr2 214118980 214119072 -36568782 + (TG)n Simple_repeat Simple_repeat 1 92 0 508 299 136 16 chr2 214120598 214120849 -36567005 + Charlie8 DNA MER1_type 2 282 -2135 2325 113 0 7 chr2 214121176 214121486 -36566368 + AluSq SINE Alu 1 308 -5 23 0 0 0 chr2 214122729 214122752 -36565102 + AT_rich Low_complexity Low_complexity 1 23 0 395 270 138 7 chr2 214123303 214123455 -36564399 + L3 LINE CR1 1095 1266 -311 264 174 0 0 chr2 214123507 214123553 -36564301 - L1ME LINE L1 -502 5619 5574 1601 157 9 53 chr2 214124097 214124319 -36563535 - L1MB8 LINE L1 -5 6173 5943 2175 110 0 10 chr2 214124319 214124620 -36563234 + AluSq SINE Alu 3 300 -13 441 0 0 0 chr2 214124620 214124669 -36563185 + (TA)n Simple_repeat Simple_repeat 2 50 0 1601 157 9 53 chr2 214124669 214124783 -36563071 - L1MB8 LINE L1 -233 5945 5851 2150 112 0 3 chr2 214124999 214125286 -36562568 - AluSx SINE Alu -25 287 2 272 221 26 0 chr2 214125771 214125848 -36562006 + MER116 DNA Mariner 2 80 0 233 177 21 31 chr2 214126449 214126545 -36561309 + (CATA)n Simple_repeat Simple_repeat 1 95 0 27 0 0 0 chr2 214126550 214126577 -36561277 + AT_rich Low_complexity Low_complexity 1 27 0 26 0 0 0 chr2 214127096 214127122 -36560732 + AT_rich Low_complexity Low_complexity 1 26 0 652 293 47 5 chr2 214127289 214127501 -36560353 + MIR SINE MIR 37 257 -5 1716 169 3 27 chr2 214129657 214129958 -36557896 + AluJo SINE Alu 1 294 -18 365 306 9 9 chr2 214130823 214130934 -36556920 - MIR3 SINE MIR -29 179 69 2054 85 48 7 chr2 214131387 214131683 -36556171 + AluSx SINE Alu 1 307 0 195 129 0 0 chr2 214131941 214131972 -36555882 + (TAA)n Simple_repeat Simple_repeat 2 32 0 504 271 5 89 chr2 214132091 214132294 -36555560 + MIR3 SINE MIR 22 207 -1 2363 90 3 0 chr2 214133124 214133423 -36554431 + AluSp SINE Alu 1 300 -13 339 192 162 0 chr2 214134260 214134359 -36553495 - L2 LINE L2 -4 3309 3195 229 292 112 11 chr2 214134562 214134651 -36553203 - MIR SINE MIR -87 121 24 2343 94 3 0 chr2 214134651 214134948 -36552906 - AluSg SINE Alu -12 298 1 477 0 0 0 chr2 214135429 214135482 -36552372 + (TATG)n Simple_repeat Simple_repeat 4 56 0 2198 95 0 0 chr2 214135482 214135756 -36552098 - AluSx SINE Alu -28 284 11 253 214 131 73 chr2 214135794 214136000 -36551854 + L1MC5 LINE L1 7601 7818 -143 2177 92 35 41 chr2 214137617 214137762 -36550092 + AluSx SINE Alu 1 145 -167 2426 87 3 3 chr2 214137762 214138073 -36549781 + AluSp SINE Alu 1 311 -2 2177 92 35 41 chr2 214138073 214138241 -36549613 + AluSx SINE Alu 145 312 0 2305 94 0 0 chr2 214138378 214138666 -36549188 - AluSq SINE Alu -23 290 3 249 33 0 0 chr2 214139456 214139486 -36548368 + (TG)n Simple_repeat Simple_repeat 2 31 0 252 286 31 20 chr2 214139651 214139749 -36548105 + L2 LINE L2 3185 3283 -30 2337 87 3 0 chr2 214140232 214140520 -36547334 + AluSg SINE Alu 6 294 -16 204 40 0 0 chr2 214140542 214140567 -36547287 + (TG)n Simple_repeat Simple_repeat 1 25 0 498 261 27 82 chr2 214140700 214140789 -36547065 - L1ME LINE L1 -375 5789 5714 2332 100 0 25 chr2 214140789 214141109 -36546745 + AluSx SINE Alu 1 312 0 498 261 27 82 chr2 214141109 214141203 -36546651 - L1ME LINE L1 -450 5714 5616 210 336 82 14 chr2 214141323 214141469 -36546385 + MIR3 SINE MIR 15 170 -38 1193 138 0 0 chr2 214141828 214141988 -36545866 - AluSx SINE Alu -151 161 2 483 180 22 0 chr2 214141991 214142080 -36545774 + L1ME2 LINE L1 6040 6130 -34 2210 96 3 0 chr2 214142194 214142476 -36545378 - AluSp SINE Alu -30 283 1 1367 126 5 5 chr2 214142868 214143075 -36544779 - AluSc SINE Alu -7 302 96 1863 235 142 17 chr2 214143769 214144432 -36543422 + L2 LINE L2 1423 2168 -1146 1914 154 3 0 chr2 214144741 214145026 -36542828 + AluSx SINE Alu 8 293 -19 183 26 103 0 chr2 214145047 214145086 -36542768 + A-rich Low_complexity Low_complexity 2 44 0 837 236 62 21 chr2 214146526 214146768 -36541086 - MIR SINE MIR 0 262 11 1024 197 70 13 chr2 214146816 214147226 -36540628 - MER113 DNA MER1_type? -35 486 1 1349 181 21 17 chr2 214149184 214149471 -36538383 - L1M4 LINE L1 -1908 4238 3951 862 108 0 8 chr2 214149485 214149605 -36538249 - FLAM_C SINE Alu -24 119 1 1036 213 21 0 chr2 214149605 214149840 -36538014 - L1M4 LINE L1 -2182 3964 3725 1558 87 5 0 chr2 214150574 214150770 -36537084 + AluSq SINE Alu 1 197 -116 23 33 0 0 chr2 214150775 214150805 -36537049 + AT_rich Low_complexity Low_complexity 1 30 0 2351 86 0 0 chr2 214150990 214151281 -36536573 - AluSq SINE Alu -11 302 12 260 233 105 12 chr2 214151602 214151688 -36536166 + MIR SINE MIR 106 199 -63 479 208 135 31 chr2 214151849 214152041 -36535813 - L1ME4a LINE L1 -276 5845 5634 2763 42 0 0 chr2 214152261 214152627 -36535227 - AluY SINE Alu 0 366 1 2252 117 0 0 chr2 214152685 214152984 -36534870 - AluSx SINE Alu -13 299 1 513 305 83 9 chr2 214153835 214154065 -36533789 + MIR SINE MIR 15 260 -2 210 105 0 0 chr2 214154250 214154288 -36533566 + (A)n Simple_repeat Simple_repeat 1 38 0 343 354 8 0 chr2 214154338 214154468 -36533386 + MIR SINE MIR 50 180 -82 2299 94 10 0 chr2 214154484 214154782 -36533072 - AluSp SINE Alu -12 301 1 215 203 34 0 chr2 214154796 214154855 -36532999 - MIR SINE MIR -14 248 188 1522 176 7 15 chr2 214154899 214155171 -36532683 + AluJo SINE Alu 29 298 -14 242 261 0 0 chr2 214155376 214155441 -36532413 + L1ME3A LINE L1 6093 6157 -13 21 57 0 0 chr2 214156814 214156849 -36531005 + AT_rich Low_complexity Low_complexity 1 35 0 411 211 13 0 chr2 214156872 214156948 -36530906 + FRAM/FAM SINE Alu 1 69 -107 233 257 19 91 chr2 214157035 214157196 -36530658 - L1ME4a LINE L1 -168 5953 5800 234 0 0 0 chr2 214157265 214157291 -36530563 + (TTG)n Simple_repeat Simple_repeat 2 27 0 586 217 9 9 chr2 214157294 214157409 -36530445 - FLAM_A SINE Alu -18 124 10 902 287 49 36 chr2 214157466 214157936 -36529918 - L1ME4a LINE L1 -2077 5731 5256 2599 47 0 0 chr2 214158437 214158734 -36529120 - AluY SINE Alu -14 297 1 5302 129 46 7 chr2 214159022 214159889 -36527965 + L1MA5 LINE L1 5397 6297 -3 22 0 0 0 chr2 214159889 214159911 -36527943 + AT_rich Low_complexity Low_complexity 1 22 0 2193 99 7 0 chr2 214159918 214160202 -36527652 + AluSc SINE Alu 1 286 -23 249 108 0 0 chr2 214160204 214160241 -36527613 + (GGGA)n Simple_repeat Simple_repeat 4 40 0 207 69 0 0 chr2 214161285 214161314 -36526540 + (TG)n Simple_repeat Simple_repeat 2 30 0 1516 232 179 28 chr2 214161509 214162074 -36525780 + L2 LINE L2 2312 2961 -353 200 233 0 0 chr2 214162093 214162136 -36525718 + T-rich Low_complexity Low_complexity 1 43 0 260 228 193 18 chr2 214162405 214162519 -36525335 + L2 LINE L2 3180 3313 0 2323 82 0 0 chr2 214162693 214163022 -36524832 - AluY SINE Alu 0 330 2 1590 169 45 21 chr2 214163413 214163703 -36524151 - AluJb SINE Alu -15 297 1 2136 128 0 26 chr2 214164494 214164806 -36523048 - AluSx SINE Alu -8 304 1 1954 133 0 48 chr2 214166564 214166733 -36521121 - AluJo SINE Alu -14 298 149 2261 114 0 6 chr2 214166733 214167048 -36520806 - AluSp SINE Alu 0 313 1 1954 133 0 48 chr2 214167048 214167187 -36520667 - AluJo SINE Alu -163 149 5 556 321 123 42 chr2 214167374 214168016 -36519838 + L2 LINE L2 1546 2239 -1075 358 303 98 37 chr2 214168567 214168811 -36519043 - L3b LINE CR1 -170 1413 1155 247 232 71 0 chr2 214169161 214169217 -36518637 + L2 LINE L2 3203 3262 -10 286 119 0 0 chr2 214169722 214169764 -36518090 + L1MD3 LINE L1 7754 7795 -200 1285 83 0 42 chr2 214170021 214170213 -36517641 + L1PB1 LINE L1 5968 6151 0 2085 124 3 7 chr2 214170369 214170667 -36517187 + AluSx SINE Alu 1 297 -15 1377 202 0 19 chr2 214170917 214171184 -36516670 + AluJo SINE Alu 1 262 -50 255 61 0 0 chr2 214171209 214171242 -36516612 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 3393 105 17 21 chr2 214171559 214171692 -36516162 - MER75 DNA T2_type 0 514 382 1941 118 3 65 chr2 214171692 214172015 -36515839 + AluSx SINE Alu 1 303 -9 3393 105 17 21 chr2 214172015 214172397 -36515457 - MER75 DNA T2_type -132 382 1 244 315 83 0 chr2 214172855 214172963 -36514891 + MIR SINE MIR 85 201 -61 2515 56 10 0 chr2 214172978 214173284 -36514570 + AluY SINE Alu 1 309 -2 1134 136 24 61 chr2 214173348 214173500 -36514354 + L1MB3 LINE L1 5591 5734 -446 2363 70 3 13 chr2 214173500 214173802 -36514052 + AluSp SINE Alu 1 299 -14 1134 136 24 61 chr2 214173802 214173862 -36513992 + L1MB3 LINE L1 5734 5795 -385 250 171 23 34 chr2 214173862 214173950 -36513904 + (TATATG)n Simple_repeat Simple_repeat 2 88 0 1941 143 40 35 chr2 214173963 214174363 -36513491 + L1MB3 LINE L1 5782 6183 0 2208 105 3 3 chr2 214174497 214174793 -36513061 + AluSq SINE Alu 5 300 -13 2188 133 0 3 chr2 214174804 214175113 -36512741 + AluSx SINE Alu 1 308 -4 334 169 17 0 chr2 214176068 214176127 -36511727 - L1MC5 LINE L1 -95 7866 7807 450 152 0 25 chr2 214176130 214176209 -36511645 - MER5A DNA MER1_type 0 189 113 1263 93 6 12 chr2 214176212 214176384 -36511470 - AluSg/x SINE Alu -9 301 131 2243 116 7 0 chr2 214176385 214176688 -36511166 - AluSx SINE Alu -7 305 1 620 162 27 0 chr2 214176692 214176803 -36511051 - MER5A DNA MER1_type -75 114 1 354 204 88 78 chr2 214176819 214177113 -36510741 - L1MC5 LINE L1 -166 7795 7499 2317 91 7 3 chr2 214177178 214177487 -36510367 - AluSx SINE Alu -2 310 1 182 232 203 0 chr2 214177540 214177609 -36510245 + MIR SINE MIR 32 114 -148 1404 172 28 93 chr2 214177612 214177705 -36510149 + MER63B DNA MER1_type 1 98 -964 2752 26 0 0 chr2 214177705 214178009 -36509845 - AluY SINE Alu -7 304 1 1404 172 28 93 chr2 214178009 214178041 -36509813 + MER63B DNA MER1_type 98 131 -931 4478 94 31 0 chr2 214178041 214178656 -36509198 - MER41B LTR ERV1 -1 634 1 1404 172 28 93 chr2 214178656 214178883 -36508971 + MER63B DNA MER1_type 131 331 -105 2288 100 7 0 chr2 214178887 214179187 -36508667 - AluSx SINE Alu -10 302 1 452 245 0 0 chr2 214179189 214179287 -36508567 - FLAM_A SINE Alu -13 129 32 2482 61 0 19 chr2 214179311 214179621 -36508233 - AluY SINE Alu -7 304 1 654 292 23 9 chr2 214180459 214180675 -36507179 + MIR SINE MIR 44 262 0 2301 105 0 3 chr2 214180711 214181015 -36506839 - AluSx SINE Alu -9 303 1 2331 120 0 0 chr2 214181290 214181598 -36506256 + AluSx SINE Alu 1 308 -4 2123 127 3 0 chr2 214181650 214181957 -36505897 + AluSx SINE Alu 1 308 -4 2187 93 4 0 chr2 214182358 214182638 -36505216 + AluSp SINE Alu 1 281 -32 480 158 37 204 chr2 214182754 214182846 -36505008 - L1ME2 LINE L1 -34 6130 6115 2158 112 0 3 chr2 214182846 214183151 -36504703 + AluSx SINE Alu 2 305 0 480 158 37 204 chr2 214183151 214183303 -36504551 - L1ME2 LINE L1 -49 6115 5939 531 253 124 21 chr2 214184248 214184434 -36503420 + MIR SINE MIR 20 224 -38 274 339 28 9 chr2 214184842 214184951 -36502903 + L2 LINE L2 3203 3313 0 372 235 196 46 chr2 214185040 214185193 -36502661 - MER5B DNA MER1_type 0 178 3 282 359 138 0 chr2 214185250 214185395 -36502459 + L2 LINE L2 3104 3268 -4 421 325 12 12 chr2 214185834 214186000 -36501854 - MIR3 SINE MIR -13 195 30 4070 144 27 15 chr2 214186479 214187151 -36500703 + L1MB7 LINE L1 5476 6155 -29 2384 95 0 0 chr2 214187316 214187620 -36500234 - AluSx SINE Alu -8 304 1 234 0 0 0 chr2 214188029 214188055 -36499799 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1855 142 0 0 chr2 214188058 214188333 -36499521 - AluSx SINE Alu -37 275 1 486 120 0 0 chr2 214191966 214192041 -36495813 + (TGGG)n Simple_repeat Simple_repeat 3 77 0 593 285 74 66 chr2 214194083 214194284 -36493570 - L2 LINE L2 0 3272 3067 1629 221 92 102 chr2 214194284 214194885 -36492969 + MLT1G1 LTR MaLR 1 595 0 593 285 74 66 chr2 214194885 214194939 -36492915 - L2 LINE L2 -205 3067 3015 288 246 0 0 chr2 214195322 214195379 -36492475 - L2 LINE L2 0 3313 3257 1431 194 10 21 chr2 214195917 214196238 -36491616 - AluJo SINE Alu 0 318 1 849 137 0 29 chr2 214196238 214196377 -36491477 - AluJb SINE Alu -177 135 1 633 209 311 33 chr2 214196434 214196678 -36491176 - MER102a DNA MER1_type -18 312 1 747 234 75 15 chr2 214197229 214197430 -36490424 + MIR SINE MIR 31 243 -19 456 250 9 56 chr2 214198599 214198707 -36489147 + MIR3 SINE MIR 101 203 -5 233 243 40 40 chr2 214199701 214199775 -36488079 + MIR3 SINE MIR 90 163 -45 684 195 140 65 chr2 214199830 214200030 -36487824 - MIR SINE MIR -15 247 33 1882 162 3 10 chr2 214200700 214201014 -36486840 - AluJb SINE Alu 0 312 1 241 255 88 20 chr2 214202985 214203087 -36484767 + L2 LINE L2 3205 3313 0 791 226 58 26 chr2 214203307 214203533 -36484321 + MIR SINE MIR 2 234 -28 946 104 14 14 chr2 214203724 214203868 -36483986 + FRAM SINE Alu 25 168 -8 239 214 58 58 chr2 214203868 214203971 -36483883 + MIR SINE MIR 89 191 -71 2255 114 0 0 chr2 214203992 214204290 -36483564 + AluSx SINE Alu 1 298 -14 1362 254 115 24 chr2 214204526 214205061 -36482793 - L1MC4a LINE L1 -1904 5904 5318 1729 149 29 11 chr2 214205076 214205357 -36482497 - AluJb SINE Alu -17 295 10 1449 262 0 119 chr2 214205389 214205732 -36482122 + AluSx SINE Alu 1 302 0 1215 126 20 106 chr2 214205742 214205988 -36481866 + MLT1B LTR MaLR 164 388 -2 371 239 69 31 chr2 214206071 214206230 -36481624 - L2 LINE L2 -410 2904 2740 1987 157 74 26 chr2 214207019 214207551 -36480303 + MLT2A2 LTR ERVL 1 554 0 254 167 0 0 chr2 214207833 214207869 -36479985 + AluSc SINE Alu 1 36 -272 2138 84 4 7 chr2 214207869 214208144 -36479710 + AluSc SINE Alu 16 289 -20 913 155 13 7 chr2 214208154 214208309 -36479545 + AluJb SINE Alu 137 292 -20 23 0 0 0 chr2 214209861 214209884 -36477970 + AT_rich Low_complexity Low_complexity 1 23 0 867 173 0 0 chr2 214209884 214210017 -36477837 - FLAM_C SINE Alu 0 133 1 808 246 65 22 chr2 214210106 214210338 -36477516 - MIR SINE MIR -1 261 20 314 262 267 11 chr2 214210390 214210568 -36477286 - MIR SINE MIR -34 228 4 2305 73 0 0 chr2 214210803 214211090 -36476764 + AluY SINE Alu 1 287 -24 715 206 0 23 chr2 214211244 214211375 -36476479 + FLAM_A SINE Alu 2 129 -4 231 274 82 0 chr2 214211868 214211941 -36475913 - MER91B DNA MER1_type -111 79 1 2250 77 10 20 chr2 214212093 214212390 -36475464 - AluSq SINE Alu -19 294 1 2264 114 0 3 chr2 214212886 214213193 -36474661 - AluSq SINE Alu -2 311 6 2094 141 0 0 chr2 214213210 214213509 -36474345 - AluSx SINE Alu -12 300 2 452 304 68 8 chr2 214213845 214214082 -36473772 + L1ME4a LINE L1 5644 5894 -227 443 141 0 0 chr2 214214182 214214260 -36473594 + AluS SINE Alu 233 310 -2 201 39 0 0 chr2 214214680 214214706 -36473148 + (T)n Simple_repeat Simple_repeat 1 26 0 214 254 342 0 chr2 214214997 214215111 -36472743 - MIR SINE MIR -1 261 109 478 206 145 88 chr2 214215700 214215928 -36471926 - Charlie8 DNA MER1_type -2150 267 27 1752 86 0 0 chr2 214216865 214217085 -36470769 + AluSg/x SINE Alu 86 305 -7 2448 81 0 0 chr2 214217093 214217389 -36470465 + AluSx SINE Alu 1 296 -16 40 37 0 0 chr2 214217503 214217557 -36470297 + AT_rich Low_complexity Low_complexity 1 54 0 385 221 23 0 chr2 214218033 214218119 -36469735 - MIR SINE MIR 0 262 175 215 310 17 0 chr2 214218432 214218490 -36469364 - L2 LINE L2 -2 3270 3212 225 236 208 42 chr2 214218607 214218679 -36469175 - L2 LINE L2 0 3272 3189 811 131 0 51 chr2 214219852 214219989 -36467865 + FLAM_C SINE Alu 8 137 -6 29 0 0 0 chr2 214219989 214220018 -36467836 + AT_rich Low_complexity Low_complexity 1 29 0 735 209 196 25 chr2 214220872 214221107 -36466747 + L1MD2 LINE L1 6069 6343 -16 2233 121 0 0 chr2 214221237 214221542 -36466312 + AluSx SINE Alu 1 305 -7 194 322 78 22 chr2 214222070 214222160 -36465694 - L2 LINE L2 -35 3237 3143 415 259 19 56 chr2 214222794 214222902 -36464952 - L2 LINE L2 -36 3236 3133 21 89 0 0 chr2 214222904 214222960 -36464894 + AT_rich Low_complexity Low_complexity 1 56 0 30 0 0 0 chr2 214223978 214224008 -36463846 + AT_rich Low_complexity Low_complexity 1 30 0 324 226 139 35 chr2 214224753 214224868 -36462986 - MER103 DNA DNA -36 130 4 206 189 65 204 chr2 214224872 214225073 -36462781 + MER91A DNA MER1_type 23 195 -1 191 216 0 0 chr2 214225108 214225145 -36462709 - MER5C DNA MER1_type -287 37 1 * 296 319 84 20 chr2 214225145 214225292 -36462562 - MIR3 SINE MIR -52 156 3 1387 189 58 33 chr2 214225520 214225819 -36462035 - AluJo SINE Alu 0 306 1 446 201 194 52 chr2 214225819 214225953 -36461901 + L2 LINE L2 3161 3313 0 580 233 104 96 chr2 214226130 214226394 -36461460 + L1MC4a LINE L1 5509 5778 -2030 360 0 0 0 chr2 214226394 214226434 -36461420 + (TG)n Simple_repeat Simple_repeat 2 41 0 580 233 104 96 chr2 214226434 214226525 -36461329 + L1MC4a LINE L1 5778 5867 -1941 1948 152 0 13 chr2 214226837 214227139 -36460715 + AluJo SINE Alu 3 300 -12 326 248 108 25 chr2 214227212 214227369 -36460485 - L1ME4a LINE L1 -11 6110 5941 587 263 62 0 chr2 214229110 214229270 -36458584 - MIR SINE MIR -5 257 88 262 306 105 45 chr2 214229317 214229631 -36458223 - L2 LINE L2 -665 2649 2317 255 185 37 0 chr2 214229642 214229696 -36458158 - L2 LINE L2 -1 3271 3216 202 266 138 0 chr2 214229785 214229879 -36457975 - MIR SINE MIR 0 262 156 191 154 154 0 chr2 214229896 214229935 -36457919 - L2 LINE L2 -12 3301 3257 * 770 224 62 26 chr2 214229912 214230104 -36457750 - MIR SINE MIR -28 234 36 247 274 42 42 chr2 214230105 214230200 -36457654 - MIR SINE MIR -122 140 46 295 342 150 23 chr2 214230387 214230647 -36457207 - L2 LINE L2 -1749 1565 1273 3367 122 77 85 chr2 214230802 214231793 -36456061 + L1MA4 LINE L1 4767 5764 -536 1506 141 58 17 chr2 214231793 214232034 -36455820 + AluJb SINE Alu 3 253 -59 3367 122 77 85 chr2 214232034 214232170 -36455684 + L1MA4 LINE L1 5764 5899 -401 2278 101 0 3 chr2 214232170 214232473 -36455381 + AluSc SINE Alu 6 302 -7 3367 122 77 85 chr2 214232473 214232869 -36454985 + L1MA4 LINE L1 5899 6289 -11 2782 20 0 0 chr2 214233138 214233438 -36454416 + AluYa5 SINE Alu 1 300 -11 985 71 16 8 chr2 214283439 214283565 -36404289 - AluSp SINE Alu -186 127 1 1378 167 0 9 chr2 214283625 214283846 -36404008 + AluJb SINE Alu 85 303 -9 395 304 14 6 chr2 214285152 214285323 -36402531 + L2 LINE L2 3134 3282 -31 2490 87 3 0 chr2 214285488 214285800 -36402054 + AluSq SINE Alu 1 313 0 1959 161 3 3 chr2 214286459 214286763 -36401091 - AluJo SINE Alu -8 304 1 1905 134 26 23 chr2 214288208 214288515 -36399339 + AluJo SINE Alu 2 309 -3 349 127 0 0 chr2 214288585 214288640 -36399214 + Alu SINE Alu 248 302 0 2229 91 0 23 chr2 214288721 214289029 -36398825 - AluSg SINE Alu -9 301 1 465 290 55 89 chr2 214289195 214289488 -36398366 + MLT1K LTR MaLR 144 426 -162 269 24 24 24 chr2 214290539 214290580 -36397274 - L1MA9 LINE L1 0 6312 6272 2191 100 3 30 chr2 214291328 214291629 -36396225 - AluSx SINE Alu -19 293 1 1216 114 0 0 chr2 214291848 214292015 -36395839 + AluSg/x SINE Alu 140 306 -6 25 0 0 0 chr2 214292261 214292286 -36395568 + AT_rich Low_complexity Low_complexity 1 25 0 3252 103 29 17 chr2 214292286 214292558 -36395296 - L1MA2 LINE L1 -4 6300 6018 2881 121 7 32 chr2 214292558 214292606 -36395248 - MSTA LTR MaLR 0 428 380 2081 135 4 0 chr2 214292606 214292930 -36394924 - AluSx SINE Alu 0 325 1 2881 121 7 32 chr2 214292930 214293318 -36394536 - MSTA LTR MaLR -48 380 1 3252 103 29 17 chr2 214293318 214293561 -36394293 - L1MA2 LINE L1 -286 6018 5779 2872 118 7 24 chr2 214293759 214294209 -36393645 - MER65A LTR ERV1 0 445 4 2241 119 0 16 chr2 214294209 214294527 -36393327 - AluSq SINE Alu 0 313 1 905 154 0 0 chr2 214294652 214294795 -36393059 - FLAM_C SINE Alu 0 143 1 2100 133 7 3 chr2 214295262 214295571 -36392283 - AluSx SINE Alu -2 310 1 2031 81 7 15 chr2 214296630 214296901 -36390953 + AluSq SINE Alu 45 313 0 201 200 55 18 chr2 214296906 214296961 -36390893 - MER5B DNA MER1_type -87 91 35 333 146 0 0 chr2 214296961 214297009 -36390845 + Alu SINE Alu 1 48 -254 1660 155 25 22 chr2 214297009 214297287 -36390567 + AluJo SINE Alu 2 280 -32 272 0 79 0 chr2 214297287 214297325 -36390529 + A-rich Low_complexity Low_complexity 5 45 0 445 190 10 20 chr2 214297326 214297426 -36390428 - MER5A DNA MER1_type -84 105 7 224 234 149 57 chr2 214297440 214297581 -36390273 - MER5A DNA MER1_type 0 189 36 22 35 0 0 chr2 214297933 214297962 -36389892 + AT_rich Low_complexity Low_complexity 1 29 0 700 58 0 0 chr2 214297997 214298083 -36389771 - AluSp/q SINE Alu -12 301 216 1268 280 109 10 chr2 214298159 214298663 -36389191 + L2 LINE L2 2109 2662 -652 2591 63 0 0 chr2 214298908 214299209 -36388645 - AluY SINE Alu -8 303 3 2138 104 7 0 chr2 214299423 214299710 -36388144 + AluSg SINE Alu 1 289 -21 357 205 82 33 chr2 214300006 214300128 -36387726 - MIR SINE MIR 0 262 135 539 250 175 13 chr2 214300311 214300539 -36387315 + LTR16A1 LTR ERVL 192 456 -1 199 296 114 0 chr2 214300934 214301022 -36386832 + L2 LINE L2 3150 3247 -25 2112 137 0 13 chr2 214301079 214301386 -36386468 + AluJb SINE Alu 1 303 -9 205 114 23 45 chr2 214301436 214301480 -36386374 - MER5A DNA MER1_type -107 82 40 714 197 94 22 chr2 214301554 214301777 -36386077 - MIR SINE MIR -7 255 17 1473 66 0 22 chr2 214302310 214302493 -36385361 + AluY SINE Alu 1 179 -132 447 298 67 11 chr2 214302593 214302771 -36385083 + MIR SINE MIR 75 262 0 238 369 54 18 chr2 214303097 214303265 -36384589 - L2 LINE L2 -213 3059 2886 26 0 0 0 chr2 214304178 214304204 -36383650 + AT_rich Low_complexity Low_complexity 1 26 0 252 343 64 14 chr2 214304359 214304499 -36383355 - MIR3 SINE MIR -2 206 60 517 88 0 0 chr2 214305308 214305376 -36382478 + L1PA7 LINE L1 6077 6144 -10 642 258 12 0 chr2 214305836 214305999 -36381855 + MIR SINE MIR 8 172 -90 684 280 15 61 chr2 214307230 214307494 -36380360 - MIR SINE MIR -10 252 1 380 277 21 28 chr2 214307994 214308135 -36379719 - L2 LINE L2 -926 2388 2249 1830 154 0 38 chr2 214308565 214308883 -36378971 + AluJo SINE Alu 1 306 -6 217 351 53 0 chr2 214309421 214309515 -36378339 + MIR SINE MIR 31 129 -79 254 200 0 53 chr2 214309527 214309602 -36378252 - MLT1L LTR MaLR -3 612 542 782 226 105 119 chr2 214309713 214310142 -36377712 - MLT1L LTR MaLR -147 468 46 203 233 0 0 chr2 214310179 214310222 -36377632 + MIR3 SINE MIR 161 203 -5 506 286 101 29 chr2 214312460 214312768 -36375086 - L2 LINE L2 -180 3133 2804 844 223 83 13 chr2 214313052 214313281 -36374573 - MIR SINE MIR -10 252 8 1972 145 0 29 chr2 214314561 214314872 -36372982 + AluJo SINE Alu 1 302 -10 2542 53 0 13 chr2 214315536 214315839 -36372015 - AluY SINE Alu -12 299 1 27 0 0 0 chr2 214316082 214316109 -36371745 + AT_rich Low_complexity Low_complexity 1 27 0 1191 221 68 70 chr2 214316582 214316863 -36370991 + L1MC5 LINE L1 7297 7577 -384 2233 94 35 0 chr2 214316863 214317149 -36370705 + AluSx SINE Alu 3 298 -14 1191 221 68 70 chr2 214317149 214317483 -36370371 + L1MC5 LINE L1 7577 7911 -50 1440 120 21 46 chr2 214318125 214318191 -36369663 - Tigger2a DNA MER2_type -2274 434 368 2559 63 0 0 chr2 214318191 214318490 -36369364 + AluY SINE Alu 1 299 -12 1440 120 21 46 chr2 214318490 214318664 -36369190 - Tigger2a DNA MER2_type -2340 368 200 2349 89 0 7 chr2 214318664 214318968 -36368886 + AluSg SINE Alu 1 302 -8 1810 193 0 0 chr2 214318973 214319269 -36368585 + AluJo SINE Alu 2 297 -15 375 173 0 0 chr2 214319269 214319350 -36368504 + GA-rich Low_complexity Low_complexity 2 82 0 1268 142 15 19 chr2 214319422 214319627 -36368227 - Tigger2a DNA MER2_type -230 204 1 1606 176 0 11 chr2 214319897 214320158 -36367696 + AluJo SINE Alu 3 260 -52 2469 60 0 0 chr2 214320259 214320576 -36367278 + AluY SINE Alu 1 317 0 556 237 126 19 chr2 214320732 214320939 -36366915 + MIR SINE MIR 32 260 -2 859 152 0 0 chr2 214320939 214321071 -36366783 + FLAM_A SINE Alu 1 132 -1 2220 112 3 0 chr2 214321246 214321540 -36366314 + AluSp SINE Alu 1 295 -18 751 346 122 19 chr2 214321544 214322075 -36365779 + L3 LINE CR1 990 1575 -2 319 266 246 53 chr2 214322088 214322138 -36365716 - MLT1K LTR MaLR -12 576 537 1779 163 7 20 chr2 214322138 214322439 -36365415 + AluJb SINE Alu 1 297 -15 319 266 246 53 chr2 214322439 214322595 -36365259 - MLT1K LTR MaLR -51 537 330 233 319 14 0 chr2 214322972 214323044 -36364810 + L1MC4a LINE L1 6511 6583 -1225 423 0 0 0 chr2 214323054 214323101 -36364753 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 2289 101 29 64 chr2 214323101 214323140 -36364714 - THE1B LTR MaLR -1 363 324 2283 109 3 16 chr2 214323140 214323452 -36364402 + AluSg SINE Alu 1 308 -2 2289 101 29 64 chr2 214323452 214323787 -36364067 - THE1B LTR MaLR -40 324 2 965 60 27 0 chr2 214323787 214323937 -36363917 + (TAGA)n Simple_repeat Simple_repeat 2 155 0 231 225 0 0 chr2 214323943 214323983 -36363871 + MER66B LTR ERV1 307 346 -140 1089 272 61 17 chr2 214323988 214324206 -36363648 + L1MC4a LINE L1 6604 6840 -968 2028 134 7 13 chr2 214324206 214324512 -36363342 + AluSx SINE Alu 1 304 -8 1089 272 61 17 chr2 214324512 214324587 -36363267 + L1MC4a LINE L1 6840 6910 -898 1127 129 0 18 chr2 214324861 214325024 -36362830 - AluJ SINE Alu -6 306 147 3505 180 92 58 chr2 214325024 214326140 -36361714 + MER52A LTR ERV1 1 1276 -2 894 183 0 7 chr2 214326140 214326293 -36361561 - AluJ SINE Alu -160 152 1 398 311 43 27 chr2 214326475 214326732 -36361122 - MIR SINE MIR 0 262 2 2336 96 0 0 chr2 214327312 214327615 -36360239 + AluSg SINE Alu 1 303 -7 306 325 42 97 chr2 214327767 214328222 -36359632 - L2 LINE L2 -16 3256 2827 2265 111 0 9 chr2 214328666 214328981 -36358873 + AluSx SINE Alu 1 312 0 261 299 13 0 chr2 214329128 214329205 -36358649 + MIR SINE MIR 171 248 -14 702 198 8 0 chr2 214329205 214329326 -36358528 + FLAM_C SINE Alu 3 124 -19 1480 187 0 38 chr2 214329573 214329715 -36358139 + AluJo SINE Alu 1 128 -184 2432 70 3 0 chr2 214329715 214330013 -36357841 + AluY SINE Alu 1 299 -12 1480 187 0 38 chr2 214330013 214330159 -36357695 + AluJo SINE Alu 128 278 -34 393 75 0 0 chr2 214330163 214330216 -36357638 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 628 204 0 0 chr2 214330401 214330514 -36357340 + FLAM_C SINE Alu 11 123 -20 184 106 0 64 chr2 214330520 214330567 -36357287 + (TTAA)n Simple_repeat Simple_repeat 1 44 0 1003 198 82 33 chr2 214330907 214331124 -36356730 - MLT1K LTR MaLR -9 579 347 3335 157 26 4 chr2 214331124 214331626 -36356228 + MLT2B3 LTR ERVL 1 517 -37 219 114 0 0 chr2 214331626 214331661 -36356193 + (TCTA)n Simple_repeat Simple_repeat 3 37 0 3335 157 26 4 chr2 214331661 214331700 -36356154 + MLT2B3 LTR ERVL 517 554 0 1003 198 82 33 chr2 214331700 214331725 -36356129 - MLT1K LTR MaLR -241 347 325 207 98 49 24 chr2 214332061 214332102 -36355752 + (TTAA)n Simple_repeat Simple_repeat 3 44 0 650 90 0 0 chr2 214332207 214332296 -36355558 + L1PA5 LINE L1 6066 6154 0 2207 109 0 0 chr2 214332567 214332882 -36354972 + AluSq SINE Alu 1 315 0 2541 191 31 54 chr2 214333307 214333826 -36354028 - MLT2B1 LTR ERVL -8 512 6 1071 160 48 39 chr2 214334025 214334256 -36353598 - AluSq SINE Alu -78 235 3 423 265 77 47 chr2 214334476 214334646 -36353208 + MER5B DNA MER1_type 1 175 -3 2228 118 0 3 chr2 214334673 214334978 -36352876 - AluSq SINE Alu -7 306 3 2230 109 0 0 chr2 214335345 214335639 -36352215 - AluSx SINE Alu -18 294 1 207 355 116 8 chr2 214335673 214335794 -36352060 - L2 LINE L2 -18 3254 3121 268 229 121 24 chr2 214335917 214336000 -36351854 - L2 LINE L2 -647 2667 2577 * 366 290 192 37 chr2 214335997 214336325 -36351529 + L2 LINE L2 2582 2960 -354 264 281 18 61 chr2 214336482 214336596 -36351258 + L2 LINE L2 3203 3311 -2 231 379 80 54 chr2 214336615 214336929 -36350925 - L2 LINE L2 -377 2937 2616 281 317 66 76 chr2 214337227 214337729 -36350125 - L2 LINE L2 -1093 2221 1725 938 216 87 22 chr2 214337743 214337974 -36349880 + MIR SINE MIR 6 251 -11 24 0 0 0 chr2 214337991 214338015 -36349839 + AT_rich Low_complexity Low_complexity 1 24 0 14296 174 39 36 chr2 214338062 214338416 -36349438 - L1PB1 LINE L1 -5 6862 6511 270 0 0 0 chr2 214338416 214338446 -36349408 + (TG)n Simple_repeat Simple_repeat 2 31 0 * 279 0 0 0 chr2 214338445 214338476 -36349378 + (TA)n Simple_repeat Simple_repeat 2 32 0 14296 174 39 36 chr2 214338446 214341074 -36346780 - L1PB1 LINE L1 -356 6511 3894 2057 132 0 11 chr2 214341074 214341361 -36346493 - AluSx SINE Alu -28 284 1 14296 174 39 36 chr2 214341361 214342577 -36345277 - L1PB1 LINE L1 -2973 3894 2652 1988 148 0 0 chr2 214342577 214342881 -36344973 - AluY SINE Alu -7 304 1 14296 174 39 36 chr2 214342881 214343787 -36344067 - L1PB1 LINE L1 -4215 2652 1751 1649 130 14 75 chr2 214343787 214344155 -36343699 - MER4A LTR ERV1 0 664 261 474 126 126 0 chr2 214344155 214344242 -36343612 - MER4A LTR ERV1 -566 98 1 10861 116 29 23 chr2 214344242 214345980 -36341874 - L1PB1 LINE L1 -5109 1754 7 1149 257 52 34 chr2 214346162 214346543 -36341311 - LTR33 LTR ERVL -8 513 126 257 216 0 0 chr2 214347037 214347088 -36340766 - L2 LINE L2 0 3313 3263 2428 33 11 0 chr2 214347298 214347574 -36340280 - AluY SINE Alu -9 302 24 981 226 0 0 chr2 214347678 214347846 -36340008 + FAM SINE Alu 1 168 -7 25 0 0 0 chr2 214347846 214347871 -36339983 + AT_rich Low_complexity Low_complexity 1 25 0 188 200 22 0 chr2 214347901 214347946 -36339908 - L2 LINE L2 0 3313 3268 * 210 364 65 0 chr2 214347944 214348021 -36339833 - MIR SINE MIR -158 104 23 853 239 88 22 chr2 214348119 214348391 -36339463 - LTR33A LTR ERVL -6 517 228 917 154 0 0 chr2 214348729 214348859 -36338995 + FLAM_C SINE Alu 1 130 -3 861 183 87 36 chr2 214348867 214349124 -36338730 + MER39 LTR ERV1 303 542 0 204 281 156 10 chr2 214349124 214349220 -36338634 - MIR SINE MIR -88 174 65 485 291 45 0 chr2 214349409 214349543 -36338311 + MER91C DNA MER1_type 1 140 0 2581 56 0 0 chr2 214349650 214349952 -36337902 - AluY SINE Alu -8 303 2 1655 165 35 21 chr2 214350282 214350567 -36337287 + AluJo SINE Alu 1 289 -23 2392 71 7 0 chr2 214350571 214350868 -36336986 - AluY SINE Alu -12 299 1 2096 131 16 0 chr2 214350982 214351287 -36336567 - AluSx SINE Alu -2 310 1 669 37 0 0 chr2 214351401 214351482 -36336372 - L1PA4 LINE L1 -73 6082 6002 1661 108 0 0 chr2 214351482 214351696 -36336158 + AluSg/x SINE Alu 83 296 -14 231 36 0 0 chr2 214351814 214351842 -36336012 + (TC)n Simple_repeat Simple_repeat 2 29 0 237 180 0 0 chr2 214351846 214351896 -36335958 - L1MC4 LINE L1 -1339 6703 6654 207 270 16 0 chr2 214352312 214352375 -36335479 - MIR SINE MIR -70 192 129 192 77 0 0 chr2 214352973 214352999 -36334855 + (CAAGG)n Simple_repeat Simple_repeat 5 30 0 21 0 0 0 chr2 214353118 214353139 -36334715 + GC_rich Low_complexity Low_complexity 1 21 0 994 189 18 53 chr2 214354081 214354308 -36333546 - MER20 DNA MER1_type 0 219 1 870 264 45 10 chr2 214354554 214354846 -36333008 + L1ME4a LINE L1 5583 5884 -237 1204 197 39 4 chr2 214354861 214355120 -36332734 + L1MB3 LINE L1 4448 4715 -1431 1123 195 44 0 chr2 214355125 214355351 -36332503 + L1MB3 LINE L1 5800 6035 -148 16005 45 15 2 chr2 214355351 214357254 -36330600 + Harlequin LTR ERV1 2691 4618 -2278 4822 74 10 0 chr2 214357251 214357861 -36329993 + Harlequin LTR ERV1 6281 6896 0 * 1969 175 75 34 chr2 214357880 214358321 -36329533 + LTR2B LTR ERV1 32 490 0 1991 111 40 14 chr2 214358613 214358910 -36328944 + AluSx SINE Alu 1 305 -7 2400 80 0 10 chr2 214358914 214359225 -36328629 + AluY SINE Alu 1 308 -3 561 216 52 26 chr2 214359592 214359745 -36328109 + MLT1L LTR MaLR 446 602 -13 2418 90 0 0 chr2 214360408 214360707 -36327147 - AluSx SINE Alu -13 299 1 228 269 258 0 chr2 214360758 214360851 -36327003 + MIR3 SINE MIR 49 165 -43 266 309 12 0 chr2 214360908 214360966 -36326888 + CT-rich Low_complexity Low_complexity 3 64 -23 1508 99 9 18 chr2 214360966 214361189 -36326665 - L1PA13 LINE L1 0 6163 5943 266 309 12 0 chr2 214361189 214361214 -36326640 + CT-rich Low_complexity Low_complexity 64 87 0 313 248 78 50 chr2 214361289 214361430 -36326424 - MLT1L LTR MaLR -4 611 467 45 45 0 0 chr2 214362738 214362804 -36325050 + AT_rich Low_complexity Low_complexity 1 66 0 297 177 25 57 chr2 214362821 214362979 -36324875 + (TTATA)n Simple_repeat Simple_repeat 1 153 0 29 0 0 0 chr2 214362991 214363020 -36324834 + AT_rich Low_complexity Low_complexity 1 29 0 1783 157 41 0 chr2 214363036 214363330 -36324524 + AluSx SINE Alu 6 311 -1 1303 140 0 0 chr2 214363346 214363539 -36324315 + AluSg/x SINE Alu 120 312 0 350 178 74 6 chr2 214363540 214363703 -36324151 + (TA)n Simple_repeat Simple_repeat 2 175 0 93 76 0 13 chr2 214363705 214363943 -36323911 + AT_rich Low_complexity Low_complexity 1 235 0 303 217 83 94 chr2 214364853 214365033 -36322821 - L1M2 LINE L1 -5832 1017 840 1094 188 54 21 chr2 214365807 214366047 -36321807 + AluJo SINE Alu 61 308 -4 208 147 0 0 chr2 214367397 214367431 -36320423 + (A)n Simple_repeat Simple_repeat 1 34 0 186 43 0 0 chr2 214367528 214367551 -36320303 + (CTG)n Simple_repeat Simple_repeat 3 25 0 505 209 148 0 chr2 214369199 214369314 -36318540 - MER3 DNA MER1_type -4 205 74 2131 127 112 12 chr2 214369423 214369754 -36318100 + THE1B LTR MaLR 1 364 0 1928 135 20 17 chr2 214370551 214370847 -36317007 + AluSx SINE Alu 1 297 -15 269 325 35 9 chr2 214370904 214371018 -36316836 - MIR3 SINE MIR -6 202 86 * 306 242 258 56 chr2 214371005 214371203 -36316651 + L2 LINE L2 2877 3114 -199 3131 160 6 13 chr2 214371209 214371234 -36316620 - L1MC3 LINE L1 -7 7778 7754 2147 112 7 3 chr2 214371234 214371539 -36316315 - AluSq SINE Alu -7 306 1 3131 160 6 13 chr2 214371539 214372058 -36315796 - L1MC3 LINE L1 -31 7754 7238 538 306 20 30 chr2 214372061 214372260 -36315594 + L2 LINE L2 3117 3313 0 21 36 0 0 chr2 214372702 214372730 -36315124 + AT_rich Low_complexity Low_complexity 1 28 0 333 269 0 83 chr2 214372815 214372923 -36314931 + MIR SINE MIR 25 123 -85 1926 145 0 41 chr2 214374050 214374188 -36313666 + AluJo SINE Alu 1 143 -169 2403 88 7 0 chr2 214374188 214374496 -36313358 + AluY SINE Alu 1 310 -1 1926 145 0 41 chr2 214374496 214374674 -36313180 + AluJo SINE Alu 143 304 -8 336 243 125 7 chr2 214374686 214374822 -36313032 - L1ME4a LINE L1 -1 6120 5969 255 79 0 0 chr2 214374916 214374954 -36312900 + (A)n Simple_repeat Simple_repeat 1 38 0 305 290 0 0 chr2 214375442 214375511 -36312343 - L2 LINE L2 -2 3311 3243 265 245 128 11 chr2 214375677 214375771 -36312083 + L2 LINE L2 2943 3047 -225 326 307 150 0 chr2 214375886 214376039 -36311815 - MIR SINE MIR -1 261 86 303 344 24 24 chr2 214376052 214376177 -36311677 + L2 LINE L2 3146 3270 -2 5406 93 11 38 chr2 214377363 214378178 -36309676 + L1PB1 LINE L1 5359 6151 0 1819 88 4 4 chr2 214378200 214378438 -36309416 - AluSq SINE Alu -1 312 75 2033 69 0 8 chr2 214378446 214378708 -36309146 - AluY SINE Alu -2 309 50 227 300 154 36 chr2 214379301 214379411 -36308443 - L2 LINE L2 -3 3269 3147 2332 112 0 0 chr2 214379650 214379953 -36307901 + AluSg SINE Alu 1 303 -7 2278 95 3 0 chr2 214380777 214381071 -36306783 + AluSx SINE Alu 1 295 -17 564 301 34 34 chr2 214381465 214381671 -36306183 - MIR SINE MIR -4 258 53 2190 96 0 0 chr2 214382326 214382635 -36305219 + AluSx SINE Alu 1 309 0 1821 163 0 16 chr2 214382778 214383085 -36304769 + AluSx SINE Alu 1 302 -10 234 0 0 0 chr2 214383086 214383112 -36304742 + (CA)n Simple_repeat Simple_repeat 2 27 0 1183 211 91 35 chr2 214383290 214383608 -36304246 + MER2 DNA MER2_type 10 345 0 593 302 198 31 chr2 214383977 214384508 -36303346 + L2 LINE L2 1697 2138 -1176 2364 110 0 0 chr2 214384508 214384817 -36303037 + AluSc SINE Alu 1 309 0 593 302 198 31 chr2 214384817 214385304 -36302550 + L2 LINE L2 2138 2885 -429 282 163 0 0 chr2 214385332 214385375 -36302479 + Alu SINE Alu 1 43 -258 1829 158 0 20 chr2 214385433 214385730 -36302124 + AluJo SINE Alu 1 291 -21 619 158 32 0 chr2 214386062 214386157 -36301697 - U6 snRNA snRNA -9 98 1 639 243 62 7 chr2 214386172 214386316 -36301538 + L2 LINE L2 3121 3272 0 268 270 35 17 chr2 214388043 214388158 -36299696 - L1ME4a LINE L1 -4 6117 6001 870 281 102 29 chr2 214388198 214388686 -36299168 - L1ME4a LINE L1 -188 5933 5410 2071 192 54 72 chr2 214388687 214389203 -36298651 - MLT1E2 LTR MaLR 0 626 137 304 109 0 0 chr2 214389517 214389572 -36298282 - L1MB3 LINE L1 -2 6181 6127 790 227 13 0 chr2 214389572 214389722 -36298132 - FRAM SINE Alu -24 152 1 929 51 0 8 chr2 214389723 214389841 -36298013 - L1MB2 LINE L1 -40 6131 6015 1923 114 34 74 chr2 214389841 214390192 -36297662 + MER1B DNA MER1_type 1 337 -2 354 125 0 16 chr2 214390194 214390258 -36297596 - L1MB2 LINE L1 -149 6022 5960 750 244 202 0 chr2 214390287 214390339 -36297515 - MIR SINE MIR -2 260 220 1520 146 0 9 chr2 214390339 214390622 -36297232 + AluJb SINE Alu 64 312 0 750 244 202 0 chr2 214390622 214390782 -36297072 - MIR SINE MIR -42 220 5 21 36 0 0 chr2 214391034 214391062 -36296792 + AT_rich Low_complexity Low_complexity 1 28 0 276 341 48 8 chr2 214392673 214392799 -36295055 + L2 LINE L2 3142 3272 0 1575 162 6 68 chr2 214392989 214393310 -36294544 - AluJo SINE Alu -11 301 1 489 119 0 89 chr2 214393489 214393590 -36294264 + MER50 LTR ERV1 502 593 -141 868 163 0 0 chr2 214393609 214393744 -36294110 + AluSq/x SINE Alu 1 135 -178 1701 173 10 3 chr2 214393744 214394039 -36293815 + AluSx SINE Alu 1 297 -15 282 277 74 68 chr2 214394180 214394328 -36293526 - MER5A DNA MER1_type -2 187 39 2348 102 0 3 chr2 214394377 214394690 -36293164 + AluSx SINE Alu 1 312 0 302 331 8 38 chr2 214394702 214394835 -36293019 - MER5A DNA MER1_type -54 135 7 2174 115 7 3 chr2 214394949 214395254 -36292600 + AluSx SINE Alu 1 306 -6 2242 101 0 0 chr2 214395607 214395918 -36291936 + AluSc SINE Alu 1 311 0 2293 196 59 105 chr2 214396049 214396774 -36291080 + LTR8A LTR ERV1 36 727 0 728 271 99 5 chr2 214396865 214397057 -36290797 + MER63A DNA MER1_type 1 210 0 631 286 113 0 chr2 214397061 214397246 -36290608 - LTR16A LTR ERVL -229 221 16 486 227 12 117 chr2 214397539 214397758 -36290096 + MIR SINE MIR 4 196 -66 2351 101 0 3 chr2 214397758 214398064 -36289790 - AluSx SINE Alu -7 305 1 486 227 12 117 chr2 214398064 214398094 -36289760 + MIR SINE MIR 196 228 -34 790 181 0 8 chr2 214398282 214398415 -36289439 + FLAM_C SINE Alu 2 133 0 643 308 111 7 chr2 214398617 214398896 -36288958 - MER115 DNA AcHobo -268 425 118 766 177 9 0 chr2 214399094 214399207 -36288647 + AluJo/FLAM SINE Alu 3 116 -196 2297 114 0 3 chr2 214399207 214399514 -36288340 - AluSx SINE Alu -6 306 1 2095 155 64 82 chr2 214399969 214400420 -36287434 + LTR47B LTR ERVL 1 443 0 1318 175 94 45 chr2 214400431 214400717 -36287137 - AluJo SINE Alu -12 300 1 293 68 0 0 chr2 214400849 214400893 -36286961 - AluSp/q SINE Alu -4 299 256 432 155 0 0 chr2 214400893 214400964 -36286890 + AluJ/FRAM SINE Alu 229 299 -13 231 146 0 0 chr2 214402003 214402044 -36285810 + (CA)n Simple_repeat Simple_repeat 1 41 0 877 291 104 39 chr2 214402870 214403595 -36284259 + L2 LINE L2 2540 3305 -8 263 116 0 0 chr2 214403648 214403691 -36284163 - AluY SINE Alu -5 296 254 1415 88 0 54 chr2 214403694 214403899 -36283955 - AluY SINE Alu -117 194 1 1508 157 9 0 chr2 214404530 214404760 -36283094 + AluJo SINE Alu 66 297 -15 571 244 30 76 chr2 214405353 214405550 -36282304 + MER5A DNA MER1_type 1 188 -1 842 144 0 0 chr2 214405631 214405749 -36282105 - FLAM_C SINE Alu -25 118 1 2456 217 87 66 chr2 214405796 214406079 -36281775 + MER97c DNA MER1_type? 87 363 -727 2169 62 29 0 chr2 214406079 214406403 -36281451 - AluY SINE Alu 0 332 1 2456 217 87 66 chr2 214406403 214407054 -36280800 + MER97c DNA MER1_type? 363 1041 -49 960 182 71 0 chr2 214407083 214407253 -36280601 - AluJb SINE Alu -7 305 124 389 275 95 5 chr2 214407307 214407496 -36280358 - HAL1b LINE L1 -710 638 433 1338 174 17 13 chr2 214407635 214407871 -36279983 - AluJo SINE Alu -6 306 70 2102 105 0 58 chr2 214408359 214408672 -36279182 - AluSg SINE Alu -15 295 1 1601 139 157 0 chr2 214408762 214408877 -36278977 + AluJo SINE Alu 1 97 -215 249 33 0 0 chr2 214408877 214408907 -36278947 + (TAAAA)n Simple_repeat Simple_repeat 3 32 0 1601 139 157 0 chr2 214408907 214409058 -36278796 + AluJo SINE Alu 97 309 -3 1978 176 11 35 chr2 214409067 214409441 -36278413 + MLT1A1 LTR MaLR 1 365 0 483 117 0 0 chr2 214410003 214410097 -36277757 + (CCCTG)n Simple_repeat Simple_repeat 2 95 0 2238 88 27 0 chr2 214410099 214410396 -36277458 - AluSq SINE Alu -8 305 1 204 207 0 35 chr2 214410523 214410581 -36277273 + T-rich Low_complexity Low_complexity 5 60 0 2695 177 56 34 chr2 214410627 214411204 -36276650 - MER90 LTR ERV1 0 614 3 810 188 16 178 chr2 214411211 214411515 -36276339 - L1ME3 LINE L1 -294 5868 5614 1932 116 86 3 chr2 214411521 214411824 -36276030 + MER44D DNA MER2_type 1 598 -11 248 297 17 8 chr2 214412098 214412216 -36275638 - L2 LINE L2 -1641 1673 1555 880 152 0 36 chr2 214412496 214412634 -36275220 - FLAM_C SINE Alu 0 133 1 2227 106 49 35 chr2 214412708 214413077 -36274777 + THE1C LTR MaLR 1 374 -1 183 42 0 0 chr2 214413459 214413483 -36274371 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 740 263 19 14 chr2 214413645 214413858 -36273996 + MIR SINE MIR 49 262 0 2297 122 3 0 chr2 214413924 214414235 -36273619 + AluSx SINE Alu 1 312 0 550 258 137 14 chr2 214414283 214414565 -36273289 - L1MC/D LINE L1 -385 5736 5416 2498 154 41 32 chr2 214414579 214415046 -36272808 - L1MB8 LINE L1 -5 6173 5703 24 77 0 0 chr2 214415335 214415387 -36272467 + AT_rich Low_complexity Low_complexity 1 52 0 1182 202 191 0 chr2 214415389 214415646 -36272208 - AluSx SINE Alu -6 306 1 44 20 0 0 chr2 214415692 214415743 -36272111 + AT_rich Low_complexity Low_complexity 1 51 0 230 223 71 27 chr2 214415862 214415974 -36271880 + L1MCa LINE L1 1952 2068 -4358 189 107 0 0 chr2 214415976 214416004 -36271850 + (TA)n Simple_repeat Simple_repeat 1 28 0 587 124 0 82 chr2 214416027 214416124 -36271730 - 5S rRNA rRNA -31 90 2 228 299 64 61 chr2 214416294 214416622 -36271232 - L1MC/D LINE L1 -1277 4869 4541 267 173 0 0 chr2 214416663 214416715 -36271139 + GA-rich Low_complexity Low_complexity 2 53 0 335 289 0 0 chr2 214417949 214418032 -36269822 - MIR3 SINE MIR -14 194 112 315 251 87 60 chr2 214418329 214418451 -36269403 + L1ME4a LINE L1 5933 6063 -58 2224 108 7 0 chr2 214418451 214418746 -36269108 + AluSx SINE Alu 1 297 -15 315 251 87 60 chr2 214418746 214418806 -36269048 + L1ME4a LINE L1 6063 6120 -1 7116 52 38 8 chr2 214419773 214420789 -36267065 + L1PA5 LINE L1 5106 6147 -7 3145 65 0 3 chr2 214420807 214421189 -36266665 + L1PA6 LINE L1 5770 6150 -4 2667 150 43 10 chr2 214421713 214422127 -36265727 - MSTA LTR MaLR 0 428 1 1731 160 17 27 chr2 214422186 214422479 -36265375 - AluJb SINE Alu -20 292 3 2277 82 20 0 chr2 214422491 214422785 -36265069 - AluSp SINE Alu -13 300 1 865 314 83 29 chr2 214422974 214423874 -36263980 + L2 LINE L2 2325 3313 0 300 53 0 0 chr2 214424308 214424346 -36263508 + (TG)n Simple_repeat Simple_repeat 2 39 0 317 333 78 25 chr2 214424391 214424595 -36263259 + L1M4 LINE L1 4553 4767 -1379 546 252 78 50 chr2 214424600 214424921 -36262933 + L1M4 LINE L1 4519 4848 -1298 571 252 104 12 chr2 214425018 214425268 -36262586 + L1M4 LINE L1 4890 5162 -984 2185 101 3 26 chr2 214425330 214425638 -36262216 + AluSx SINE Alu 1 301 -11 1008 168 0 24 chr2 214425640 214425807 -36262047 + AluJb SINE Alu 136 298 -14 267 241 0 46 chr2 214425843 214425951 -36261903 + L1M LINE L1 5255 5357 -2451 2016 137 0 3 chr2 214425958 214426251 -36261603 + AluJb SINE Alu 17 308 -4 461 276 244 31 chr2 214426362 214426714 -36261140 - LTR33 LTR ERVL -94 427 1 848 129 0 0 chr2 214426856 214427014 -36260840 + FLAM_C SINE Alu 1 158 0 2063 128 0 0 chr2 214427019 214427337 -36260517 + AluSg SINE Alu 1 318 0 829 262 114 36 chr2 214427418 214427895 -36259959 + MLT1H1 LTR MaLR 3 559 -36 329 284 0 11 chr2 214427920 214428015 -36259839 + MLT1H1-int LTR MaLR 1 94 -1277 327 312 49 41 chr2 214428134 214428276 -36259578 + MLT1H1-int LTR MaLR 383 544 -827 2398 97 0 3 chr2 214428276 214428587 -36259267 + AluSg SINE Alu 1 310 0 327 312 49 41 chr2 214428587 214428605 -36259249 + MLT1H1-int LTR MaLR 544 560 -811 187 292 42 0 chr2 214428894 214428966 -36258888 + MIR SINE MIR 125 199 -63 238 200 60 0 chr2 214428967 214429017 -36258837 - L2 LINE L2 -3 3269 3217 472 255 0 0 chr2 214429017 214429119 -36258735 + MER99 DNA DNA 2 103 -725 2236 107 0 0 chr2 214429485 214429775 -36258079 - AluSg SINE Alu -20 290 1 2310 104 0 7 chr2 214430489 214430788 -36257066 - AluSq SINE Alu -16 297 1 1930 153 7 3 chr2 214430791 214431086 -36256768 - AluJo SINE Alu -16 296 1 285 220 0 0 chr2 214431509 214431559 -36256295 - L2 LINE L2 -56 3257 3208 1030 218 81 106 chr2 214431644 214431944 -36255910 - MLT1J LTR MaLR -4 507 220 1638 142 6 99 chr2 214431944 214432138 -36255716 - AluJo SINE Alu -18 294 140 2309 96 3 7 chr2 214432138 214432440 -36255414 + AluY SINE Alu 1 301 -10 1638 142 6 99 chr2 214432440 214432569 -36255285 - AluJo SINE Alu -172 140 1 1030 218 81 106 chr2 214432569 214432713 -36255141 - MLT1J LTR MaLR -291 220 74 2121 117 0 0 chr2 214432713 214432995 -36254859 + AluSx SINE Alu 1 282 -30 288 0 0 0 chr2 214432998 214433030 -36254824 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 311 353 78 0 chr2 214433095 214433211 -36254643 - L2 LINE L2 -253 3060 2936 2073 142 7 0 chr2 214433367 214433663 -36254191 - AluSx SINE Alu -14 298 1 264 249 200 89 chr2 214434407 214434632 -36253222 + L2 LINE L2 3023 3272 0 811 175 26 7 chr2 214434775 214434929 -36252925 - L1ME3A LINE L1 -7 6163 6007 454 182 0 0 chr2 214434933 214435021 -36252833 - L1ME3A LINE L1 -204 5966 5879 1088 144 72 10 chr2 214435057 214435252 -36252602 - AluSc SINE Alu -9 300 94 2106 138 0 3 chr2 214436035 214436346 -36251508 + AluJb SINE Alu 1 310 -2 545 282 87 26 chr2 214436346 214436655 -36251199 + L1MC4a LINE L1 5607 5934 -1874 3206 143 8 0 chr2 214437018 214437515 -36250339 - L1PA15 LINE L1 -1 6164 5664 237 304 179 14 chr2 214440593 214440722 -36247132 + MIR SINE MIR 20 126 -136 2297 256 16 2 chr2 214440722 214441289 -36246565 + MER90 LTR ERV1 1 575 0 237 304 179 14 chr2 214441289 214441366 -36246488 + MIR SINE MIR 126 260 -2 273 292 58 42 chr2 214441521 214441641 -36246213 - MER5A DNA MER1_type -2 187 66 2178 126 0 0 chr2 214441641 214441961 -36245893 - AluSx SINE Alu 0 312 1 1520 182 24 27 chr2 214442112 214442409 -36245445 - AluJb SINE Alu -16 296 1 2365 73 0 26 chr2 214442462 214442765 -36245089 - AluY SINE Alu -16 295 1 264 325 73 39 chr2 214442979 214443185 -36244669 + L2 LINE L2 2546 2758 -556 372 363 31 67 chr2 214443244 214443663 -36244191 + L2 LINE L2 2851 3254 -18 2427 48 41 3 chr2 214443846 214444140 -36243714 - AluY SINE Alu -6 305 1 2403 97 0 0 chr2 214444140 214444440 -36243414 - AluSq SINE Alu -13 300 1 1694 256 19 2 chr2 214446375 214446796 -36241058 + MER90 LTR ERV1 1 428 -147 220 275 12 38 chr2 214446992 214447072 -36240782 + MER5B DNA MER1_type 99 176 -2 1945 152 0 3 chr2 214447773 214448075 -36239779 - AluJo SINE Alu -11 301 1 558 139 158 0 chr2 214448106 214448207 -36239647 - Tigger3b DNA MER2_type -4 1237 1121 2555 78 35 54 chr2 214448208 214448260 -36239594 - Tigger3b DNA MER2_type -2014 1015 964 4708 6 0 2 chr2 214448260 214448769 -36239085 - MER9 LTR ERVK -3 508 1 2555 78 35 54 chr2 214448769 214448806 -36239048 - Tigger3b DNA MER2_type -2065 964 928 2350 87 0 7 chr2 214448806 214449106 -36238748 + AluY SINE Alu 1 298 -13 2555 78 35 54 chr2 214449106 214449441 -36238413 - Tigger3b DNA MER2_type -2101 928 598 902 109 0 54 chr2 214449441 214449510 -36238344 - FLAM_C SINE Alu -173 139 81 3202 53 5 2 chr2 214449510 214449907 -36237947 + MER48 LTR ERV1 1 398 0 902 109 0 54 chr2 214449907 214449984 -36237870 - FLAM_C SINE Alu -231 81 1 1742 108 22 32 chr2 214449986 214450263 -36237591 - Tigger3b DNA MER2_type -659 572 299 604 129 53 8 chr2 214450579 214450711 -36237143 - Tigger3(Golem) DNA MER2_type -428 2601 2464 180 0 0 0 chr2 214450711 214450731 -36237123 + (CA)n Simple_repeat Simple_repeat 1 20 0 548 236 0 0 chr2 214450732 214450838 -36237016 - MER94 DNA DNA 0 134 29 2373 100 3 0 chr2 214450841 214451142 -36236712 + AluSx SINE Alu 1 302 -10 1463 145 0 9 chr2 214451172 214451386 -36236468 + AluJo SINE Alu 1 212 -100 286 143 41 0 chr2 214451401 214451450 -36236404 - AluSg/x SINE Alu -132 168 118 703 102 0 10 chr2 214452745 214452843 -36235011 + MER4A LTR ERV1 2 98 -566 2535 73 34 112 chr2 214452843 214453004 -36234850 + MER4A LTR ERV1 261 433 -231 2036 114 7 17 chr2 214453004 214453301 -36234553 - AluSq SINE Alu -19 294 1 2535 73 34 112 chr2 214453301 214453518 -36234336 + MER4A LTR ERV1 433 603 -61 2357 75 20 3 chr2 214453518 214453811 -36234043 - AluSp SINE Alu -15 298 1 2535 73 34 112 chr2 214453811 214453868 -36233986 + MER4A LTR ERV1 603 663 -1 1051 172 0 0 chr2 214453907 214454070 -36233784 - AluJb SINE Alu -20 292 130 2331 88 27 0 chr2 214454079 214454376 -36233478 - AluSg SINE Alu -5 305 1 923 87 0 32 chr2 214454720 214454881 -36232973 - AluSc SINE Alu 0 316 160 2409 97 0 0 chr2 214454902 214455210 -36232644 + AluSx SINE Alu 1 308 -4 2209 129 0 0 chr2 214456149 214456452 -36231402 + AluJb SINE Alu 1 303 -9 200 220 77 22 chr2 214456519 214456610 -36231244 + L2 LINE L2 3197 3292 -21 1811 330 38 6 chr2 214456751 214457464 -36230390 - ERVL LTR ERVL -1425 4339 3604 523 287 77 34 chr2 214457467 214457676 -36230178 - LTR16A LTR ERVL -150 300 83 247 148 19 19 chr2 214457756 214457810 -36230044 - L1ME4a LINE L1 -108 6013 5960 21 36 0 0 chr2 214457928 214457956 -36229898 + AT_rich Low_complexity Low_complexity 1 28 0 209 224 0 20 chr2 214458701 214458750 -36229104 + A-rich Low_complexity Low_complexity 2 49 0 287 219 0 41 chr2 214459858 214459931 -36227923 + MIR SINE MIR 84 153 -109 1418 206 111 57 chr2 214460016 214460447 -36227407 - MER31B LTR ERV1 0 466 9 1993 145 159 8 chr2 214460447 214460819 -36227035 - MSTA LTR MaLR 0 428 1 7420 160 33 13 chr2 214460896 214461199 -36226655 + L1PA16 LINE L1 3871 4167 -1999 2224 141 22 14 chr2 214461199 214461560 -36226294 - THE1B LTR MaLR 0 364 1 7420 160 33 13 chr2 214461560 214463506 -36224348 + L1PA16 LINE L1 4167 6164 -2 675 174 30 23 chr2 214463532 214463664 -36224190 - FLAM_C SINE Alu 0 133 1 1545 160 55 27 chr2 214463735 214464028 -36223826 - AluJb SINE Alu -11 301 1 282 29 0 0 chr2 214464452 214464487 -36223367 + (GA)n Simple_repeat Simple_repeat 1 35 0 574 329 81 0 chr2 214466509 214466731 -36221123 - MER115 DNA AcHobo -425 268 29 222 217 0 39 chr2 214466779 214466845 -36221009 - MIR SINE MIR -112 96 33 1926 165 0 13 chr2 214467123 214467439 -36220415 - AluJb SINE Alu 0 312 1 1607 183 21 108 chr2 214467440 214467866 -36219988 - L1M4 LINE L1 -1154 4992 4604 1367 180 42 62 chr2 214467935 214468290 -36219564 - L1MB8 LINE L1 -12 6166 5819 2246 90 0 7 chr2 214468290 214468580 -36219274 - AluSg SINE Alu -17 293 6 2472 81 0 3 chr2 214468600 214468908 -36218946 - AluY SINE Alu -4 307 1 922 155 15 95 chr2 214468908 214469108 -36218746 - L1MB8 LINE L1 -572 5606 5423 697 182 0 40 chr2 214469240 214469388 -36218466 - FLAM_C SINE Alu 0 143 2 214 246 8 102 chr2 214469580 214469676 -36218178 - MIR SINE MIR -96 166 81 458 307 0 0 chr2 214469676 214469790 -36218064 + MER81 DNA DNA 1 114 0 214 246 8 102 chr2 214469790 214469811 -36218043 - MIR SINE MIR -181 81 60 2182 108 6 13 chr2 214469909 214470223 -36217631 + AluSx SINE Alu 1 312 0 1619 174 0 28 chr2 214470672 214470954 -36216900 - AluJb SINE Alu -15 297 24 2190 120 7 3 chr2 214471425 214471734 -36216120 - AluSx SINE Alu -2 310 1 2033 89 68 21 chr2 214472073 214472354 -36215500 + AluSp SINE Alu 1 294 -19 249 108 0 0 chr2 214472377 214472414 -36215440 + (T)n Simple_repeat Simple_repeat 1 37 0 897 220 50 83 chr2 214475506 214475928 -36211926 + L1MC4 LINE L1 7635 8042 0 2308 58 17 17 chr2 214476155 214476447 -36211407 - AluY SINE Alu -19 292 1 617 164 107 19 chr2 214476450 214476609 -36211245 - MIR SINE MIR -36 226 54 1402 113 0 0 chr2 214476882 214477076 -36210778 + AluSg/x SINE Alu 119 312 0 2049 146 3 0 chr2 214477098 214477400 -36210454 - AluSx SINE Alu -9 303 1 22 0 0 0 chr2 214477403 214477425 -36210429 + AT_rich Low_complexity Low_complexity 1 22 0 180 152 0 0 chr2 214477693 214477726 -36210128 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 2506 28 42 0 chr2 214477916 214478203 -36209651 + AluY SINE Alu 1 299 -12 234 0 0 0 chr2 214478794 214478820 -36209034 + (TG)n Simple_repeat Simple_repeat 1 26 0 2169 106 58 0 chr2 214478974 214479267 -36208587 + AluSg SINE Alu 1 310 0 23 0 0 0 chr2 214479576 214479599 -36208255 + AT_rich Low_complexity Low_complexity 1 23 0 1027 246 8 4 chr2 214480155 214480403 -36207451 - MIR SINE MIR 0 262 14 1521 173 18 7 chr2 214480683 214480837 -36207017 - AluJb SINE Alu -25 287 136 207 0 0 0 chr2 214480837 214480860 -36206994 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2379 84 0 0 chr2 214480860 214481145 -36206709 - AluSq SINE Alu -28 285 1 1521 173 18 7 chr2 214481145 214481261 -36206593 - AluJb SINE Alu -175 137 13 684 264 202 17 chr2 214482037 214482359 -36205495 + L1ME3 LINE L1 5323 5584 -578 2316 107 0 10 chr2 214482359 214482669 -36205185 + AluSq SINE Alu 1 307 -6 684 264 202 17 chr2 214482669 214482867 -36204987 + L1ME3 LINE L1 5584 5935 -227 2271 98 0 3 chr2 214482867 214483173 -36204681 + AluY SINE Alu 1 305 -6 1656 178 25 4 chr2 214483490 214483771 -36204083 - AluJb SINE Alu -25 287 1 390 260 30 0 chr2 214484145 214484245 -36203609 - MIR SINE MIR -123 139 37 1917 121 3 46 chr2 214484523 214484828 -36203026 + AluSx SINE Alu 1 292 -20 880 140 57 32 chr2 214485644 214485706 -36202148 + MER20 DNA MER1_type 1 60 -159 2291 89 0 0 chr2 214485706 214485999 -36201855 - AluSx SINE Alu -19 293 1 880 140 57 32 chr2 214485999 214486093 -36201761 + MER20 DNA MER1_type 60 161 -58 518 299 99 5 chr2 214486134 214486345 -36201509 - MIR SINE MIR -15 247 17 308 253 0 50 chr2 214486367 214486466 -36201388 + L1MC4 LINE L1 6612 6705 -1337 201 211 0 0 chr2 214486467 214486519 -36201335 + (TA)n Simple_repeat Simple_repeat 1 52 0 234 250 71 0 chr2 214486520 214486604 -36201250 + L1MC4 LINE L1 6614 6703 -1339 320 110 66 11 chr2 214486647 214486738 -36201116 + (TA)n Simple_repeat Simple_repeat 1 96 0 2349 103 3 0 chr2 214486783 214487093 -36200761 + AluSq SINE Alu 1 311 -2 1965 120 33 4 chr2 214487324 214487641 -36200213 - AluSx SINE Alu 0 325 1 759 136 0 38 chr2 214488155 214488277 -36199577 + AluJo/FLAM SINE Alu 1 119 -183 2174 108 0 13 chr2 214488277 214488582 -36199272 - AluSq SINE Alu -12 301 1 245 221 81 23 chr2 214488609 214488695 -36199159 + L2 LINE L2 3182 3272 0 370 346 49 22 chr2 214489170 214489355 -36198499 - MIR3 SINE MIR -3 205 16 392 172 121 69 chr2 214489387 214489503 -36198351 + FLAM_A SINE Alu 1 122 -11 1980 143 7 3 chr2 214489697 214489990 -36197864 + AluSx SINE Alu 6 299 -13 464 195 50 94 chr2 214491396 214491555 -36196299 + MLT1K LTR MaLR 411 562 -26 1935 128 35 17 chr2 214491935 214492224 -36195630 - AluSx SINE Alu -18 294 1 322 353 0 0 chr2 214492873 214492975 -36194879 + MIR SINE MIR 28 129 -79 263 253 0 11 chr2 214495640 214495731 -36192123 + (TA)n Simple_repeat Simple_repeat 2 91 0 1311 192 44 106 chr2 214497220 214497608 -36190246 + MLT2D LTR ERVL 1 361 -53 378 0 0 0 chr2 214497608 214497650 -36190204 + (TG)n Simple_repeat Simple_repeat 2 43 0 1311 192 44 106 chr2 214497650 214497694 -36190160 + MLT2D LTR ERVL 361 406 -8 2279 93 0 17 chr2 214497971 214498271 -36189583 - AluSc SINE Alu -14 295 1 297 294 79 8 chr2 214498970 214499096 -36188758 + MIR3 SINE MIR 70 204 -4 1290 187 54 80 chr2 214500042 214500502 -36187352 - LTR7 LTR ERV1 -2 448 1 1141 193 115 6 chr2 214500809 214501131 -36186723 - MER69 DNA AcHobo -10 2516 2160 2339 71 4 0 chr2 214501137 214501448 -36186406 - AluSp SINE Alu 0 314 3 922 135 23 0 chr2 214501468 214501601 -36186253 - AluJo SINE Alu -176 136 1 1656 207 0 3 chr2 214501649 214501990 -36185864 + AluJb SINE Alu 1 340 0 2231 138 41 84 chr2 214502372 214502837 -36185017 + MER41B LTR ERV1 131 575 -60 844 114 0 94 chr2 214503202 214503296 -36184558 - MER57-int LTR ERV1 -4583 2954 2877 2298 47 33 36 chr2 214503296 214503597 -36184257 + AluY SINE Alu 1 300 -11 844 114 0 94 chr2 214503597 214503651 -36184203 - MER57-int LTR ERV1 -4660 2877 2820 * 3638 155 52 7 chr2 214503647 214504323 -36183531 + MER39-int LTR ERV1 5085 5790 -541 499 158 62 96 chr2 214504343 214504489 -36183365 + MER39-int LTR ERV1 5914 6054 -277 728 257 70 35 chr2 214504546 214504803 -36183051 + MER39-int LTR ERV1 6410 6675 -1 1206 103 35 11 chr2 214504885 214505059 -36182795 + AluY SINE Alu 124 301 -10 2172 160 50 7 chr2 214505060 214505466 -36182388 + MER41B LTR ERV1 202 540 -14 2957 0 0 0 chr2 214505965 214506274 -36181580 - AluYa5 SINE Alu -2 309 1 307 281 126 18 chr2 214506353 214506520 -36181334 + MIR SINE MIR 78 262 0 22 35 0 0 chr2 214506640 214506669 -36181185 + AT_rich Low_complexity Low_complexity 1 29 0 846 165 0 0 chr2 214506669 214506796 -36181058 - FLAM_C SINE Alu -5 128 2 1090 223 82 49 chr2 214506942 214507409 -36180445 - MER39 LTR ERV1 -3 687 1 1359 205 54 79 chr2 214507493 214508022 -36179832 + MER39 LTR ERV1 5 683 -24 598 226 123 0 chr2 214508327 214508482 -36179372 + MER5B DNA MER1_type 3 176 -2 1684 144 11 15 chr2 214508571 214508835 -36179019 - AluJo SINE Alu -15 297 35 291 114 0 0 chr2 214508855 214508899 -36178955 + (TTCC)n Simple_repeat Simple_repeat 1 44 0 1210 116 52 6 chr2 214508899 214509072 -36178782 - AluSg/x SINE Alu -22 290 110 5192 57 2 7 chr2 214509073 214509688 -36178166 + LTR5 LTR ERVK 1 612 -357 2280 99 7 0 chr2 214509826 214510119 -36177735 - AluSq SINE Alu -18 295 1 38 39 0 0 chr2 214510129 214510181 -36177673 + AT_rich Low_complexity Low_complexity 1 52 0 2387 61 0 0 chr2 214510355 214510633 -36177221 - AluY SINE Alu -33 278 1 34 0 0 0 chr2 214511362 214511396 -36176458 + AT_rich Low_complexity Low_complexity 1 34 0 1938 164 0 0 chr2 214511399 214511685 -36176169 - AluSx SINE Alu -26 286 1 27 49 0 0 chr2 214512190 214512231 -36175623 + AT_rich Low_complexity Low_complexity 1 41 0 2230 99 27 0 chr2 214512463 214512756 -36175098 + AluSx SINE Alu 1 301 -11 184 231 19 19 chr2 214512872 214512924 -36174930 + MIR3 SINE MIR 138 189 -19 2607 122 8 0 chr2 214513650 214514020 -36173834 + LOR1a LTR ERV1 1 373 -124 2520 119 8 16 chr2 214514024 214514409 -36173445 - MER31A LTR ERV1 -103 382 1 667 215 101 63 chr2 214514409 214514646 -36173208 - L1MC4 LINE L1 -590 7452 7207 252 211 0 0 chr2 214515183 214515221 -36172633 - AluJ/monomer SINE Alu -269 39 2 2090 111 42 0 chr2 214515405 214515693 -36172161 + AluSq SINE Alu 1 300 -13 230 267 16 134 chr2 214516791 214516907 -36170947 + L2 LINE L2 2570 2643 -671 2010 118 0 0 chr2 214516907 214517169 -36170685 - AluSg SINE Alu -12 298 37 230 267 16 134 chr2 214517169 214517299 -36170555 + L2 LINE L2 2643 2787 -527 2505 68 0 0 chr2 214518309 214518603 -36169251 - AluY SINE Alu -16 295 2 833 177 53 84 chr2 214519004 214519230 -36168624 + MER58A DNA MER1_type 6 224 0 450 192 30 3 chr2 214520560 214520661 -36167193 + MIR SINE MIR 103 204 -58 22 35 0 0 chr2 214520664 214520693 -36167161 + AT_rich Low_complexity Low_complexity 1 29 0 1824 149 10 36 chr2 214521375 214521683 -36166171 - AluSx SINE Alu -12 300 1 245 315 11 43 chr2 214521943 214522035 -36165819 + MIR3 SINE MIR 71 159 -49 191 313 24 24 chr2 214522396 214522479 -36165375 + MIR SINE MIR 2 84 -178 2627 51 0 0 chr2 214522904 214523215 -36164639 - AluY SINE Alu 0 311 1 2748 117 24 12 chr2 214524100 214524520 -36163334 + MSTB LTR MaLR 1 425 -1 273 291 35 0 chr2 214526065 214526151 -36161703 - MIR SINE MIR -25 237 149 26 0 0 0 chr2 214526778 214526804 -36161050 + AT_rich Low_complexity Low_complexity 1 26 0 2359 76 7 20 chr2 214526810 214527112 -36160742 + AluSg SINE Alu 1 298 -12 531 198 78 9 chr2 214528338 214528454 -36159400 - MER5A DNA MER1_type -3 186 63 387 183 108 0 chr2 214528592 214528685 -36159169 + MIR3 SINE MIR 61 163 -45 2419 67 0 0 chr2 214528928 214529213 -36158641 - AluY SINE Alu -21 290 6 1544 129 9 5 chr2 214529414 214529638 -36158216 - AluSg/x SINE Alu -2 308 84 40 0 0 0 chr2 214529685 214529725 -36158129 + AT_rich Low_complexity Low_complexity 1 40 0 765 194 0 0 chr2 214529870 214530004 -36157850 - FLAM_A SINE Alu -3 139 6 291 232 12 12 chr2 214530239 214530321 -36157533 + L2 LINE L2 3232 3313 0 1781 153 6 58 chr2 214530469 214530617 -36157237 + AluSx SINE Alu 1 126 -186 2198 106 0 26 chr2 214530617 214530928 -36156926 + AluSq SINE Alu 1 303 -10 1781 153 6 58 chr2 214530928 214531092 -36156762 + AluSx SINE Alu 126 297 -15 2254 113 0 3 chr2 214531095 214531397 -36156457 + AluSg SINE Alu 1 301 -9 4684 123 96 20 chr2 214532175 214532939 -36154915 - LTR12 LTR ERV1 0 826 5 2072 182 81 29 chr2 214532955 214533533 -36154321 - pTR5 LTR ERV1 -1093 1345 738 2308 111 0 0 chr2 214534244 214534550 -36153304 - AluSg SINE Alu -3 307 2 2613 51 0 3 chr2 214535224 214535535 -36152319 + AluY SINE Alu 1 310 -1 296 317 84 7 chr2 214535537 214535679 -36152175 - L1ME3A LINE L1 -30 6140 5988 38 0 0 0 chr2 214536232 214536270 -36151584 + GC_rich Low_complexity Low_complexity 1 38 0 1188 177 23 67 chr2 214536400 214536700 -36151154 + AluJb SINE Alu 9 295 -17 2020 138 23 0 chr2 214536790 214537095 -36150759 + AluSx SINE Alu 1 312 0 943 238 57 20 chr2 214537664 214537963 -36149891 + L1ME3A LINE L1 5856 6165 -5 2199 104 4 0 chr2 214538206 214538511 -36149343 - AluSg SINE Alu 0 306 1 2301 105 0 0 chr2 214538745 214539041 -36148813 - AluSq SINE Alu -12 301 6 499 311 43 0 chr2 214539677 214539841 -36148013 + MIR SINE MIR 56 226 -36 2403 46 4 0 chr2 214540392 214540700 -36147154 + AluY SINE Alu 1 309 0 1829 161 0 7 chr2 214540733 214541025 -36146829 - AluJo SINE Alu -22 290 1 207 105 26 0 chr2 214541304 214541342 -36146512 + A-rich Low_complexity Low_complexity 6 44 0 2293 79 7 0 chr2 214542779 214543069 -36144785 - AluSc SINE Alu -16 293 2 1371 87 0 6 chr2 214543742 214543935 -36143919 - AluSg/x SINE Alu 0 303 112 675 210 155 17 chr2 214543965 214544146 -36143708 + MLT1G1 LTR MaLR 1 206 -389 1141 196 78 100 chr2 214544154 214544603 -36143251 + L1MD1 LINE L1 5794 6232 -10 639 247 200 17 chr2 214544617 214544946 -36142908 + MLT1G3 LTR MaLR 129 555 0 310 282 153 0 chr2 214544968 214545099 -36142755 + MIR SINE MIR 112 262 0 2411 66 23 0 chr2 214545142 214545444 -36142410 + AluYa5 SINE Alu 1 309 -2 2422 93 6 0 chr2 214546036 214546347 -36141507 + AluSp SINE Alu 1 313 0 1076 84 0 0 chr2 214546832 214546963 -36140891 + AluSq/x SINE Alu 1 131 -181 315 0 0 0 chr2 214547058 214547093 -36140761 + (CA)n Simple_repeat Simple_repeat 2 36 0 822 156 0 0 chr2 214547664 214547786 -36140068 - FLAM_C SINE Alu -11 122 1 1842 160 21 0 chr2 214548207 214548489 -36139365 + AluJb SINE Alu 3 290 -22 3600 138 39 4 chr2 214548584 214549147 -36138707 - MER50 LTR ERV1 -23 711 129 877 160 148 12 chr2 214549147 214549364 -36138490 - AluSx SINE Alu 0 330 91 2632 82 99 17 chr2 214549367 214549781 -36138073 - LTR7 LTR ERV1 -2 448 1 2352 98 53 16 chr2 214549781 214550159 -36137695 - HERVH LTR ERV1 0 7713 7322 1382 135 23 0 chr2 214550157 214550372 -36137482 - HERVH LTR ERV1 -1894 5819 5600 * 3064 142 0 2 chr2 214550373 214550991 -36136863 - HERVH LTR ERV1 -2564 5149 4488 26667 102 22 17 chr2 214550993 214554966 -36132888 - HERVH LTR ERV1 -3720 3993 1 2627 96 99 5 chr2 214554968 214555373 -36132481 - LTR7 LTR ERV1 -2 448 6 680 116 0 0 chr2 214555373 214555468 -36132386 - AluSx SINE Alu -217 96 2 659 158 8 45 chr2 214555470 214555603 -36132251 - MER50 LTR ERV1 -600 134 7 623 191 0 26 chr2 214555962 214556077 -36131777 - FRAM SINE Alu -65 111 1 719 197 8 0 chr2 214556156 214556278 -36131576 - FLAM_C SINE Alu -19 124 2 376 231 157 9 chr2 214556326 214556434 -36131420 - MER5B DNA MER1_type -2 176 53 213 234 0 0 chr2 214556477 214556524 -36131330 - MER5B DNA MER1_type -129 49 3 241 111 352 0 chr2 214556530 214556584 -36131270 + MER116 DNA Mariner 4 76 -4 1108 121 12 6 chr2 214557670 214557835 -36130019 - AluSg/x SINE Alu -15 295 130 725 185 0 15 chr2 214559724 214559859 -36127995 - FLAM_A SINE Alu 0 133 1 270 317 149 12 chr2 214560219 214560380 -36127474 - MIR SINE MIR -17 245 63 192 40 0 0 chr2 214562778 214562803 -36125051 + (TCCCC)n Simple_repeat Simple_repeat 4 28 0 1739 136 16 67 chr2 214564166 214564482 -36123372 - AluJb SINE Alu -10 302 3 1834 106 68 0 chr2 214564694 214564985 -36122869 - AluSx SINE Alu 0 309 1 22 0 0 0 chr2 214564988 214565010 -36122844 + AT_rich Low_complexity Low_complexity 1 22 0 3952 179 33 53 chr2 214565228 214566215 -36121639 - LTR5 LTR ERVK 0 969 2 1445 176 49 32 chr2 214566639 214566759 -36121095 + AluJo SINE Alu 1 117 -195 243 0 0 0 chr2 214566759 214566786 -36121068 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1445 176 49 32 chr2 214566786 214566949 -36120905 + AluJo SINE Alu 117 289 -23 2475 72 0 13 chr2 214567196 214567501 -36120353 - AluY SINE Alu -10 301 1 713 307 80 18 chr2 214567808 214568320 -36119534 - L2 LINE L2 -787 2527 1984 2259 102 0 0 chr2 214568561 214568854 -36119000 - AluSx SINE Alu -18 294 2 485 322 9 9 chr2 214569073 214569263 -36118591 - L1ME LINE L1 -457 5664 5475 556 189 94 0 chr2 214569277 214569383 -36118471 + L1MC4 LINE L1 6798 6913 -1129 * 4589 179 29 65 chr2 214569380 214569642 -36118212 + L1MA7 LINE L1 3956 4226 -2065 2297 105 0 0 chr2 214569642 214569938 -36117916 - AluSg SINE Alu -13 297 2 4589 179 29 65 chr2 214569938 214570234 -36117620 + L1MA7 LINE L1 4226 4531 -1760 2109 86 10 23 chr2 214570234 214570538 -36117316 + AluSg SINE Alu 9 308 -2 4589 179 29 65 chr2 214570538 214571810 -36116044 + L1MA7 LINE L1 4531 5671 -620 890 145 0 0 chr2 214571839 214571963 -36115891 - FLAM_C SINE Alu -19 124 1 2121 135 26 20 chr2 214571964 214572084 -36115770 + L1MA7 LINE L1 5662 5780 -351 1744 125 19 70 chr2 214572084 214572397 -36115457 + AluSg SINE Alu 1 297 -13 2121 135 26 20 chr2 214572397 214572652 -36115202 + L1MA7 LINE L1 5780 6038 -93 880 237 136 6 chr2 214572626 214572980 -36114874 + L1MC4 LINE L1 6894 7293 -749 * 28 0 0 0 chr2 214573455 214573483 -36114371 + AT_rich Low_complexity Low_complexity 1 28 0 378 337 35 6 chr2 214574233 214574405 -36113449 - MIR SINE MIR -23 239 63 206 241 0 48 chr2 214574893 214574976 -36112878 + G-rich Low_complexity Low_complexity 1 79 0 1146 103 25 25 chr2 214576048 214576251 -36111603 - AluSg/x SINE Alu -8 302 100 521 299 0 0 chr2 214576292 214576469 -36111385 + G-rich Low_complexity Low_complexity 1 177 0 2203 84 10 10 chr2 214576930 214577228 -36110626 - AluSx SINE Alu -8 304 7 800 177 0 0 chr2 214577229 214577370 -36110484 - AluSg/x SINE Alu -35 275 135 853 103 0 89 chr2 214577858 214578004 -36109850 - FLAM_C SINE Alu 0 133 1 24 0 0 0 chr2 214578006 214578030 -36109824 + AT_rich Low_complexity Low_complexity 1 24 0 275 191 16 0 chr2 214578159 214578222 -36109632 + CT-rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr2 214578281 214578303 -36109551 + AT_rich Low_complexity Low_complexity 1 22 0 186 276 51 31 chr2 214578403 214578501 -36109353 + MIR SINE MIR 44 143 -65 2388 83 10 0 chr2 214579465 214579767 -36108087 - AluSq SINE Alu -6 307 3 25 51 0 0 chr2 214580135 214580174 -36107680 + AT_rich Low_complexity Low_complexity 1 39 0 2347 96 0 7 chr2 214580179 214580481 -36107373 + AluSx SINE Alu 1 300 -12 234 71 0 0 chr2 214581193 214581221 -36106633 + tRNA-His-CAC tRNA tRNA 2 29 -46 2483 75 0 3 chr2 214581380 214581686 -36106168 + AluY SINE Alu 1 305 -6 1310 152 51 4 chr2 214582225 214582481 -36105373 - L1MC3 LINE L1 -6 7779 7512 343 265 17 51 chr2 214582498 214582615 -36105239 - L2 LINE L2 -8 3305 3193 740 167 0 53 chr2 214582744 214582894 -36104960 + FLAM_C SINE Alu 2 143 0 1114 219 150 29 chr2 214586394 214586914 -36100940 - L1M4 LINE L1 -978 5168 4586 5606 149 26 5 chr2 214587849 214589232 -36098622 - L1PA16 LINE L1 -9 6157 4750 922 177 0 11 chr2 214589234 214589415 -36098439 + L1PA16 LINE L1 4591 4769 -1377 552 164 10 19 chr2 214589592 214589696 -36098158 - MLT1C LTR MaLR 0 467 365 6862 244 43 12 chr2 214589696 214591787 -36096067 - ERVL-C1 LTR ERVL -3536 2228 2 1811 163 55 42 chr2 214591788 214592175 -36095679 - MLT2C1 LTR ERVL 0 554 6 2062 126 0 77 chr2 214592190 214592554 -36095300 - MER1B DNA MER1_type -1 336 1 233 331 161 8 chr2 214592705 214592829 -36095025 + L2 LINE L2 3125 3267 -5 1723 155 3 29 chr2 214592999 214593309 -36094545 - AluJb SINE Alu -10 302 1 2279 100 7 0 chr2 214593687 214593986 -36093868 - AluSq SINE Alu -12 301 1 593 151 7 130 chr2 214594264 214594410 -36093444 - FLAM_C SINE Alu -12 131 4 2310 92 3 0 chr2 214594492 214594820 -36093034 - AluSq SINE Alu 0 329 1 180 0 0 0 chr2 214595122 214595142 -36092712 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 457 214 45 18 chr2 214595545 214595657 -36092197 + L2 LINE L2 3190 3304 -9 1574 136 70 15 chr2 214595977 214596249 -36091605 - AluJo SINE Alu -25 287 1 303 296 102 51 chr2 214596371 214596587 -36091267 + L1ME3A LINE L1 5761 5987 -183 2347 95 0 13 chr2 214596684 214596999 -36090855 - AluSq SINE Alu -2 311 1 1959 138 24 0 chr2 214597022 214597319 -36090535 - AluSx SINE Alu -8 304 1 25 0 0 0 chr2 214597382 214597407 -36090447 + AT_rich Low_complexity Low_complexity 1 25 0 571 307 52 5 chr2 214597580 214597792 -36090062 - MIR SINE MIR -20 242 21 366 274 39 56 chr2 214598489 214598696 -36089158 - L2 LINE L2 -297 3016 2736 320 295 33 0 chr2 214598720 214598842 -36089012 - L1MC4 LINE L1 -3 8039 7914 2313 94 3 3 chr2 214598848 214599155 -36088699 - AluY SINE Alu -4 307 1 755 179 0 0 chr2 214599176 214599293 -36088561 - FLAM_C SINE Alu -16 117 1 320 188 0 50 chr2 214599293 214599373 -36088481 - L1MC4 LINE L1 -115 7927 7852 4768 170 19 3 chr2 214599388 214600258 -36087596 - L1MC1 LINE L1 -13 6600 5717 7577 194 100 41 chr2 214600261 214602136 -36085718 - L1MC1 LINE L1 -1821 4605 2842 334 102 0 34 chr2 214602136 214602195 -36085659 - L1MA5A LINE L1 -5 6292 6236 7577 194 100 41 chr2 214602195 214603105 -36084749 - L1MC1 LINE L1 -3584 2842 1987 871 132 0 22 chr2 214603105 214603241 -36084613 - FLAM_C SINE Alu 0 133 1 7577 194 100 41 chr2 214603241 214604705 -36083149 - L1MC1 LINE L1 -4439 1987 5 2053 240 109 19 chr2 214604703 214605398 -36082456 - L1MC4 LINE L1 -188 7854 7097 * 2065 111 14 3 chr2 214605439 214605728 -36082126 - AluSq SINE Alu -19 294 3 2155 209 250 4 chr2 214605730 214606443 -36081411 - L2 LINE L2 -758 2556 1669 26 0 0 0 chr2 214606884 214606910 -36080944 + AT_rich Low_complexity Low_complexity 1 26 0 462 292 46 3 chr2 214606942 214607084 -36080770 + MIR SINE MIR 44 190 -63 1247 203 41 19 chr2 214607307 214607623 -36080231 - MER58D DNA MER1_type -60 326 4 421 209 54 31 chr2 214607846 214607975 -36079879 - L1MD3 LINE L1 -33 7962 7831 1894 140 17 3 chr2 214608270 214608563 -36079291 - AluSx SINE Alu -15 297 1 2147 105 13 0 chr2 214608703 214609008 -36078846 - AluSc SINE Alu 0 309 1 974 180 6 0 chr2 214609291 214609463 -36078391 + FAM SINE Alu 1 173 -2 2261 104 0 10 chr2 214612218 214612527 -36075327 + AluY SINE Alu 1 306 -5 306 244 0 0 chr2 214612650 214612732 -36075122 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 1957 151 82 31 chr2 214612744 214613135 -36074719 - Tigger2a DNA MER2_type -23 411 1 194 128 26 0 chr2 214615200 214615239 -36072615 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 2046 136 0 10 chr2 214616195 214616497 -36071357 - AluSx SINE Alu -13 299 1 509 353 101 29 chr2 214616851 214617267 -36070587 + L3 LINE CR1 39 484 -1093 1362 139 7 76 chr2 214617375 214617535 -36070319 - L1MA7 LINE L1 -23 6289 6183 1920 162 0 7 chr2 214617535 214617838 -36070016 + AluJb SINE Alu 1 301 -11 1362 139 7 76 chr2 214617838 214618045 -36069809 - L1MA7 LINE L1 -129 6183 5963 2248 107 0 0 chr2 214618128 214618426 -36069428 - AluSq SINE Alu -15 298 1 730 312 187 35 chr2 214618444 214619278 -36068576 + L3 LINE CR1 521 1570 -7 198 370 0 25 chr2 214619326 214619407 -36068447 + L3 LINE CR1 1475 1553 -24 571 311 66 36 chr2 214620003 214620530 -36067324 + L1MC4 LINE L1 7326 7994 -48 261 333 0 0 chr2 214621738 214621822 -36066032 + L2 LINE L2 3175 3258 -14 2355 96 0 0 chr2 214623000 214623301 -36064553 - AluSx SINE Alu -11 301 1 21 0 0 0 chr2 214623853 214623874 -36063980 + AT_rich Low_complexity Low_complexity 1 21 0 2223 109 3 0 chr2 214624035 214624337 -36063517 + AluSg SINE Alu 1 303 -7 725 119 34 0 chr2 214625152 214625270 -36062584 - MER30 DNA MER1_type 0 230 109 6364 29 0 1 chr2 214625293 214626041 -36061813 - L1PA3 LINE L1 0 6155 5409 6304 26 9 0 chr2 214626041 214626849 -36061005 + L1PA3 LINE L1 4631 5442 -713 722 57 86 0 chr2 214626849 214626954 -36060900 - MER30 DNA MER1_type -116 114 1 274 301 19 29 chr2 214627945 214628048 -36059806 - MER5B DNA MER1_type -3 175 74 2035 98 7 0 chr2 214628114 214628390 -36059464 + AluSg SINE Alu 24 301 -9 277 300 11 11 chr2 214628462 214628552 -36059302 - MER5A DNA MER1_type -5 184 95 182 219 0 0 chr2 214628570 214628602 -36059252 - L2 LINE L2 -862 2452 2421 210 268 62 72 chr2 214630832 214630929 -36056925 + MIR3 SINE MIR 64 159 -49 2168 100 10 7 chr2 214630984 214631284 -36056570 - AluSq SINE Alu -1 312 12 1666 170 37 10 chr2 214631523 214631817 -36056037 + AluJo SINE Alu 5 306 -6 2781 68 3 0 chr2 214632134 214632499 -36055355 - L1PA5 LINE L1 -19 6135 5770 23 0 0 0 chr2 214632499 214632522 -36055332 + AT_rich Low_complexity Low_complexity 1 23 0 7340 35 0 0 chr2 214632522 214633503 -36054351 - L1PA3 LINE L1 -3 6152 5180 255 329 35 77 chr2 214636501 214636787 -36051067 + L1MC/D LINE L1 5388 5661 -2147 1975 138 31 20 chr2 214637950 214638305 -36049549 - MER46B DNA MER2_type -2 234 1 411 275 192 0 chr2 214640389 214640509 -36047345 - L2 LINE L2 -1 3271 3129 2031 135 7 0 chr2 214640798 214641095 -36046759 - AluSx SINE Alu -13 299 1 811 313 88 17 chr2 214641563 214642114 -36045740 + L1ME4a LINE L1 5311 5902 -219 276 200 0 0 chr2 214642143 214642203 -36045651 + (TATG)n Simple_repeat Simple_repeat 3 62 0 2446 74 0 0 chr2 214642372 214642670 -36045184 + AluY SINE Alu 1 298 -13 200 222 173 0 chr2 214643046 214643127 -36044727 - MIR SINE MIR -36 226 132 22 70 0 0 chr2 214643208 214643251 -36044603 + AT_rich Low_complexity Low_complexity 1 43 0 587 189 45 0 chr2 214643251 214643362 -36044492 - AluJb SINE Alu -196 116 1 1579 272 121 0 chr2 214643539 214644239 -36043615 + L2 LINE L2 2518 3303 -10 27 62 0 0 chr2 214645353 214645401 -36042453 + AT_rich Low_complexity Low_complexity 1 48 0 21 95 0 0 chr2 214645992 214646055 -36041799 + AT_rich Low_complexity Low_complexity 1 63 0 303 152 61 0 chr2 214646769 214646835 -36041019 - MLT1D LTR MaLR 0 505 436 210 180 0 0 chr2 214646837 214646898 -36040956 + (TA)n Simple_repeat Simple_repeat 2 62 0 326 118 0 26 chr2 214646943 214647019 -36040835 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 1377 182 79 53 chr2 214647080 214647146 -36040708 + Charlie1 DNA MER1_type 3 66 -2695 2122 125 0 3 chr2 214647146 214647442 -36040412 - AluSx SINE Alu -17 295 1 1377 182 79 53 chr2 214647442 214647860 -36039994 + Charlie1 DNA MER1_type 66 2761 0 182 385 56 19 chr2 214648560 214648721 -36039133 + MIR3 SINE MIR 3 169 -39 337 227 27 0 chr2 214649044 214649119 -36038735 - HsTC2 DNA Tc2 -1519 379 303 1992 128 0 7 chr2 214650416 214650698 -36037156 - AluSx SINE Alu -3 309 30 1521 216 8 35 chr2 214650902 214651277 -36036577 - MLT1A1 LTR MaLR 0 365 1 241 293 120 30 chr2 214651278 214651411 -36036443 + L2 LINE L2 3119 3263 -50 1864 122 0 0 chr2 214652211 214652465 -36035389 - AluSx SINE Alu -9 303 50 200 261 62 0 chr2 214652729 214652794 -36035060 + MIR SINE MIR 183 251 -11 2057 104 0 4 chr2 214652800 214653068 -36034786 + AluSg SINE Alu 16 282 -28 247 167 77 64 chr2 214653934 214654012 -36033842 + L1MC/D LINE L1 5707 5785 -2023 1836 152 0 3 chr2 214654182 214654488 -36033366 + AluJb SINE Alu 1 305 0 2167 94 3 10 chr2 214655897 214656185 -36031669 - AluSq SINE Alu -27 286 1 267 348 186 6 chr2 214656231 214656392 -36031462 - L2 LINE L2 0 3272 3083 282 307 134 8 chr2 214656764 214656891 -36030963 - MIR SINE MIR -92 170 28 311 302 85 23 chr2 214657079 214657208 -36030646 + L1ME2 LINE L1 5790 5926 -238 1868 111 0 0 chr2 214657472 214657715 -36030139 + AluSx SINE Alu 1 243 -69 236 235 56 130 chr2 214658248 214658410 -36029444 + MIR SINE MIR 79 228 -34 254 299 63 31 chr2 214659093 214659220 -36028634 + MIR3 SINE MIR 3 133 -75 270 0 0 0 chr2 214659650 214659680 -36028174 + (CA)n Simple_repeat Simple_repeat 1 30 0 3415 121 64 2 chr2 214660249 214660795 -36027059 - LTR19B LTR ERV1 0 580 1 37 23 0 0 chr2 214660814 214660858 -36026996 + AT_rich Low_complexity Low_complexity 1 44 0 510 266 9 0 chr2 214661176 214661289 -36026565 + Cheshire DNA MER1_type 9 122 -2298 2379 171 58 22 chr2 214661289 214661792 -36026062 + L1MC3 LINE L1 7255 7775 -10 5002 184 131 27 chr2 214661814 214663063 -36024791 + Cheshire DNA MER1_type 115 1493 -927 3482 55 16 0 chr2 214663100 214663537 -36024317 + MLT2A1 LTR ERVL 1 444 0 1226 110 17 0 chr2 214664343 214664516 -36023338 - AluSg/x SINE Alu -2 308 133 374 310 79 30 chr2 214664766 214665069 -36022785 + L1 LINE L1 4204 4521 -1625 257 280 0 0 chr2 214665192 214665285 -36022569 + L1M4 LINE L1 3702 3794 -2352 294 250 23 0 chr2 214665287 214665375 -36022479 + L1M4 LINE L1 3895 3984 -2162 4166 87 17 15 chr2 214665466 214666604 -36021250 - L1PA4 LINE L1 -496 5659 4873 4095 38 0 0 chr2 214666604 214667099 -36020755 + L1PA4 LINE L1 5661 6155 0 394 276 30 47 chr2 214667115 214667285 -36020569 - L1MC/D LINE L1 -596 5575 5458 22 35 0 0 chr2 214667324 214667353 -36020501 + AT_rich Low_complexity Low_complexity 1 29 0 1687 215 93 0 chr2 214667414 214667790 -36020064 - L1MD2 LINE L1 -2 6357 5947 224 29 0 29 chr2 214668166 214668200 -36019654 + (TG)n Simple_repeat Simple_repeat 1 33 0 1569 235 118 6 chr2 214668715 214669183 -36018671 - MLT2B1 LTR ERVL 0 520 1 1219 174 37 40 chr2 214669462 214669761 -36018093 - L1MD1 LINE L1 0 6242 5945 * 3156 228 31 20 chr2 214669736 214670701 -36017153 - L1MDa LINE L1 -2839 3701 2726 634 280 135 79 chr2 214670720 214671099 -36016755 - L1MDa LINE L1 -5670 870 471 543 231 25 99 chr2 214671107 214671349 -36016505 - MER65B LTR ERV1 -307 224 1 1338 292 23 27 chr2 214671349 214671832 -36016022 - MER65B-int LTR ERV1 -22 4849 4369 486 190 37 11 chr2 214671838 214671976 -36015878 + MER31-int LTR ERV1 3346 3452 -1484 2613 155 34 9 chr2 214672073 214672517 -36015337 + MER66B LTR ERV1 27 481 -5 1293 234 38 25 chr2 214672520 214672836 -36015018 - L1MDa LINE L1 -6195 345 26 1762 140 60 33 chr2 214673304 214673669 -36014185 + THE1C LTR MaLR 1 375 0 183 42 0 0 chr2 214674029 214674053 -36013801 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 334 198 160 38 chr2 214674418 214674524 -36013330 + MLT1F1 LTR MaLR 449 567 0 228 226 52 9 chr2 214674580 214674695 -36013159 + (TTATA)n Simple_repeat Simple_repeat 5 124 0 401 273 0 0 chr2 214674894 214675004 -36012850 - HUERS-P3 LTR ERV1 -8809 110 1 3940 111 66 3 chr2 214675006 214675610 -36012244 - LTR9B LTR ERV1 -2 642 1 2175 186 98 53 chr2 214676840 214677419 -36010435 + MER77 LTR ERV1 1 605 0 182 294 142 5 chr2 214679179 214679383 -36008471 + L2 LINE L2 2853 3084 -188 300 339 71 24 chr2 214680466 214680593 -36007261 + MIR3 SINE MIR 3 135 -73 760 218 185 68 chr2 214681185 214681672 -36006182 - MLT1G1 LTR MaLR 0 555 12 1879 160 52 15 chr2 214683277 214683620 -36004234 + MLT1A1 LTR MaLR 6 361 -4 466 266 12 26 chr2 214683620 214683751 -36004103 - MIR SINE MIR -61 147 33 21 57 0 0 chr2 214685755 214685790 -36002064 + AT_rich Low_complexity Low_complexity 1 35 0 869 176 42 0 chr2 214686135 214686300 -36001554 + FRAM SINE Alu 5 176 0 372 43 0 0 chr2 214686305 214686351 -36001503 + (GA)n Simple_repeat Simple_repeat 1 46 0 993 192 8 73 chr2 214686450 214686684 -36001170 - MER20 DNA MER1_type 0 219 1 405 314 58 22 chr2 214687452 214687678 -36000176 - LTR16A LTR ERVL -10 440 207 237 33 0 0 chr2 214688233 214688263 -35999591 + (ATGTG)n Simple_repeat Simple_repeat 5 34 0 22 35 0 0 chr2 214689425 214689454 -35998400 + AT_rich Low_complexity Low_complexity 1 29 0 6848 52 9 38 chr2 214689454 214690978 -35996876 - SVA Other Other -839 1375 13 1650 202 6 17 chr2 214691034 214691380 -35996474 + MLT1A1 LTR MaLR 23 364 -1 393 270 51 15 chr2 214691414 214691551 -35996303 + MIR SINE MIR 88 229 -33 2270 113 0 0 chr2 214692154 214692445 -35995409 + AluSx SINE Alu 6 296 -16 288 289 10 48 chr2 214693680 214693784 -35994070 + MIR SINE MIR 67 166 -96 907 181 0 12 chr2 214693999 214694159 -35993695 - FRAM SINE Alu -18 158 1 361 175 0 0 chr2 214694343 214694406 -35993448 + MLT1E1 LTR MaLR 178 240 -414 1306 151 51 77 chr2 214694636 214694988 -35992866 - L1ME1 LINE L1 -273 5893 5551 256 287 19 19 chr2 214697827 214697935 -35989919 + L1ME LINE L1 5328 5435 -686 185 298 0 0 chr2 214699018 214699065 -35988789 + MIR SINE MIR 198 244 -18 249 83 0 0 chr2 214699065 214699101 -35988753 + (TG)n Simple_repeat Simple_repeat 1 36 0 1220 169 88 99 chr2 214699130 214699503 -35988351 - MLT1A2 LTR MaLR -5 369 1 21 71 0 0 chr2 214699747 214699789 -35988065 + AT_rich Low_complexity Low_complexity 1 42 0 225 238 38 86 chr2 214700378 214700498 -35987356 - MIR SINE MIR -56 152 32 2442 60 0 25 chr2 214700599 214700913 -35986941 + AluY SINE Alu 1 306 -5 375 23 0 0 chr2 214701796 214701840 -35986014 + (CA)n Simple_repeat Simple_repeat 1 44 0 315 333 0 0 chr2 214702378 214702474 -35985380 + L2 LINE L2 3209 3304 -9 3203 177 42 5 chr2 214702476 214703096 -35984758 - HUERS-P3b LTR ERV1 -1278 7641 6999 1525 148 24 4 chr2 214703197 214703447 -35984407 - HUERS-P3b LTR ERV1 -2672 6247 5993 * 21997 144 20 21 chr2 214703445 214707078 -35980776 - HUERS-P3b LTR ERV1 -4422 4497 869 2483 75 3 0 chr2 214707078 214707385 -35980469 - AluY SINE Alu -3 308 1 21997 144 20 21 chr2 214707385 214707512 -35980342 - HUERS-P3b LTR ERV1 -8050 869 743 688 201 21 70 chr2 214707552 214707753 -35980101 - HUERS-P3b LTR ERV1 -6889 529 374 7108 52 8 0 chr2 214707753 214709356 -35978498 + L1PA6 LINE L1 4544 6153 -1 320 224 19 37 chr2 214709356 214709463 -35978391 - HUERS-P3b LTR ERV1 -8814 105 1 241 269 175 0 chr2 214709468 214709628 -35978226 - LTR9B LTR ERV1 -6 638 451 21 36 0 0 chr2 214709729 214709757 -35978097 + AT_rich Low_complexity Low_complexity 1 28 0 510 287 26 82 chr2 214710582 214710658 -35977196 - L1MDa LINE L1 -3319 2810 2731 2428 77 0 0 chr2 214710658 214710958 -35976896 + AluSx SINE Alu 1 300 -12 510 287 26 82 chr2 214710958 214711468 -35976386 - L1MDa LINE L1 -3398 2731 2273 800 162 36 0 chr2 214711468 214711635 -35976219 - L1MB2 LINE L1 -3 6168 5996 510 287 26 82 chr2 214711635 214711802 -35976052 - L1MDa LINE L1 -3856 2273 2098 378 317 8 0 chr2 214712199 214712366 -35975488 - L1MDa LINE L1 -4582 1547 1379 2328 68 0 59 chr2 214712399 214712720 -35975134 - AluY SINE Alu -9 302 1 513 276 96 26 chr2 214712788 214713215 -35974639 - L1MDa LINE L1 -4874 1245 789 302 393 9 0 chr2 214713284 214713396 -35974458 - L1MDa LINE L1 -5455 664 552 270 248 45 38 chr2 214713744 214713877 -35973977 - L1MDa LINE L1 -5983 136 3 242 268 18 0 chr2 214714012 214714068 -35973786 - MIR3 SINE MIR -11 197 141 216 303 41 41 chr2 214714265 214714351 -35973503 - L2 LINE L2 -217 3055 2967 1991 184 69 69 chr2 214714351 214714905 -35972949 - MLT2B3 LTR ERVL 0 554 1 216 303 41 41 chr2 214714905 214714940 -35972914 - L2 LINE L2 -304 2968 2934 2050 107 53 0 chr2 214715887 214716168 -35971686 + AluSq SINE Alu 1 296 -17 2365 203 50 42 chr2 214717136 214717757 -35970097 + MLT1E2 LTR MaLR 1 626 0 383 282 169 37 chr2 214717882 214718155 -35969699 - L2 LINE L2 -16 3297 2989 509 276 20 49 chr2 214718247 214718278 -35969576 - L2 LINE L2 -627 2687 2657 2647 164 21 19 chr2 214718278 214718749 -35969105 - MER70A LTR ERVL 0 472 1 509 276 20 49 chr2 214718749 214718920 -35968934 - L2 LINE L2 -657 2657 2491 234 200 50 0 chr2 214719968 214720028 -35967826 + (TTATA)n Simple_repeat Simple_repeat 2 64 0 282 339 38 38 chr2 214720197 214720380 -35967474 - MIR3 SINE MIR -6 202 20 30 27 0 0 chr2 214721344 214721381 -35966473 + AT_rich Low_complexity Low_complexity 1 37 0 504 315 91 40 chr2 214721651 214722014 -35965840 + L1ME4a LINE L1 5563 5963 -158 461 198 188 0 chr2 214722014 214722115 -35965739 + FLAM_A SINE Alu 1 120 -13 504 315 91 40 chr2 214722115 214722281 -35965573 + L1ME4a LINE L1 5963 6119 -2 21 0 0 0 chr2 214722288 214722309 -35965545 + AT_rich Low_complexity Low_complexity 1 21 0 1314 188 10 124 chr2 214722939 214723343 -35964511 - MER21A LTR ERV1 -233 698 341 479 152 0 0 chr2 214723335 214723414 -35964440 + MER39B LTR ERV1 385 463 -190 * 903 217 70 4 chr2 214723414 214723644 -35964210 + L1MD2 LINE L1 5889 6133 -226 439 260 45 7 chr2 214723658 214723812 -35964042 + L1MD2 LINE L1 6197 6356 -3 392 190 73 159 chr2 214723808 214724040 -35963814 + L1ME2 LINE L1 5815 6026 -138 * 266 250 0 0 chr2 214724042 214724110 -35963744 + L1ME2 LINE L1 6087 6154 -10 1534 198 16 3 chr2 214724781 214725099 -35962755 - MER2 DNA MER2_type 0 345 24 253 272 25 0 chr2 214725993 214726074 -35961780 + MLT1H LTR MaLR 119 201 -348 403 246 60 30 chr2 214726079 214726213 -35961641 + MLT1H LTR MaLR 402 539 -10 842 148 0 0 chr2 214728989 214729117 -35958737 - FLAM_C SINE Alu -5 138 11 2345 74 0 0 chr2 214729162 214729500 -35958354 + AluY SINE Alu 1 338 0 21 71 0 0 chr2 214729569 214729611 -35958243 + AT_rich Low_complexity Low_complexity 1 42 0 1811 85 65 0 chr2 214730257 214730504 -35957350 + AluY SINE Alu 35 297 -14 33 43 0 0 chr2 214730540 214730587 -35957267 + AT_rich Low_complexity Low_complexity 1 47 0 370 299 133 21 chr2 214731057 214731291 -35956563 + L2 LINE L2 3051 3310 -3 357 24 0 0 chr2 214731292 214731334 -35956520 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 21 36 0 0 chr2 214731621 214731649 -35956205 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 214733533 214733557 -35954297 + AT_rich Low_complexity Low_complexity 1 24 0 313 272 179 49 chr2 214733927 214734071 -35953783 + MIR SINE MIR 47 211 -51 536 287 10 63 chr2 214734071 214734351 -35953503 + MIR SINE MIR 2 262 0 318 278 302 0 chr2 214734712 214734881 -35952973 - MIR SINE MIR -12 250 31 195 176 29 0 chr2 214735720 214735754 -35952100 + MIR SINE MIR 117 151 -111 1464 199 46 53 chr2 214736248 214736641 -35951213 + MLT1B LTR MaLR 1 390 0 311 348 28 0 chr2 214737268 214737409 -35950445 - MIR3 SINE MIR -6 202 58 220 294 47 0 chr2 214737419 214737504 -35950350 + L2 LINE L2 2707 2795 -519 1890 134 0 11 chr2 214737936 214738212 -35949642 + AluSx SINE Alu 1 273 -39 1910 99 53 11 chr2 214738381 214738665 -35949189 - AluY SINE Alu -15 296 1 314 313 69 23 chr2 214738796 214738927 -35948927 - L2 LINE L2 -1 3312 3176 21 0 0 0 chr2 214740014 214740035 -35947819 + AT_rich Low_complexity Low_complexity 1 21 0 289 305 130 20 chr2 214741058 214741214 -35946640 - MIR SINE MIR -56 206 38 233 200 50 0 chr2 214741506 214741566 -35946288 - MLT1J LTR MaLR -344 167 105 756 182 0 8 chr2 214743017 214743149 -35944705 + FLAM_C SINE Alu 2 132 -1 342 0 0 0 chr2 214743149 214743187 -35944667 + (TG)n Simple_repeat Simple_repeat 2 39 0 395 179 74 0 chr2 214743244 214743339 -35944515 + MER58A DNA MER1_type 46 147 0 1754 151 7 0 chr2 214743454 214743725 -35944129 + AluSx SINE Alu 25 297 -15 225 205 53 26 chr2 214744022 214744173 -35943681 + (TTATA)n Simple_repeat Simple_repeat 5 159 0 37 62 0 0 chr2 214744789 214744854 -35943000 + AT_rich Low_complexity Low_complexity 1 65 0 2341 153 28 33 chr2 214746070 214746496 -35941358 - MSTB LTR MaLR -2 424 1 241 294 57 4 chr2 214747546 214747663 -35940191 - MIR SINE MIR -2 206 78 230 143 95 0 chr2 214747708 214747750 -35940104 + MER5C DNA MER1_type 31 76 -248 381 242 22 11 chr2 214748940 214749031 -35938823 + MIR SINE MIR 170 261 -1 23 68 0 0 chr2 214750692 214750736 -35937118 + AT_rich Low_complexity Low_complexity 1 44 0 2031 143 13 3 chr2 214750920 214751227 -35936627 + AluSx SINE Alu 1 310 -2 185 0 40 0 chr2 214752933 214752958 -35934896 + (TTTTTG)n Simple_repeat Simple_repeat 1 26 0 3505 83 63 104 chr2 214753371 214754032 -35933822 - MER51A LTR ERV1 0 634 1 1484 177 81 29 chr2 214755997 214756381 -35931473 - L1MB2 LINE L1 -9 6162 5759 2122 153 52 105 chr2 214756403 214756899 -35930955 + MLT2B2 LTR ERVL 1 470 -45 322 213 5 58 chr2 214756914 214757102 -35930752 + (TA)n Simple_repeat Simple_repeat 2 179 0 227 97 0 0 chr2 214757103 214757134 -35930720 + MLT2C1 LTR ERVL 367 397 0 2375 177 27 37 chr2 214757134 214757384 -35930470 - L1MB2 LINE L1 -430 5741 5490 234 0 0 0 chr2 214757384 214757410 -35930444 + (TG)n Simple_repeat Simple_repeat 2 27 0 2375 177 27 37 chr2 214757410 214757564 -35930290 - L1MB2 LINE L1 -681 5490 5336 5738 122 36 0 chr2 214757564 214758593 -35929261 - L1PA15 LINE L1 0 6165 5116 2375 177 27 37 chr2 214758593 214759041 -35928813 - L1MB2 LINE L1 -835 5336 4887 274 345 6 6 chr2 214759250 214759415 -35928439 - L1M4 LINE L1 -1217 4929 4765 4801 205 45 34 chr2 214759449 214760537 -35927317 - L1M4 LINE L1 -1475 4671 3564 1857 117 15 86 chr2 214760537 214760703 -35927151 - AluJo SINE Alu -10 302 169 367 35 35 0 chr2 214760703 214760760 -35927094 + (TA)n Simple_repeat Simple_repeat 1 59 0 1857 117 15 86 chr2 214760760 214760918 -35926936 - AluJo SINE Alu -143 169 1 4801 205 45 34 chr2 214760918 214761173 -35926681 - L1M4 LINE L1 -2582 3564 3313 2093 163 15 32 chr2 214761529 214761895 -35925959 + MER57A LTR ERV1 1 361 -42 2047 108 65 0 chr2 214761895 214762174 -35925680 - AluSq SINE Alu -16 297 1 2093 163 15 32 chr2 214762174 214762213 -35925641 + MER57A LTR ERV1 361 399 -4 807 106 35 0 chr2 214762213 214762326 -35925528 - AluSx SINE Alu -2 308 192 1124 106 0 0 chr2 214762327 214762468 -35925386 - AluSx SINE Alu -172 141 1 190 0 32 32 chr2 214763309 214763340 -35924514 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 182 282 42 28 chr2 214763509 214763580 -35924274 + L3 LINE CR1 997 1068 -509 2045 108 31 0 chr2 214764169 214764456 -35923398 - AluSx SINE Alu -16 296 1 2581 64 0 0 chr2 214764960 214765271 -35922583 + AluY SINE Alu 1 311 0 364 268 68 34 chr2 214765319 214765524 -35922330 + LTR49-int LTR ERV1 6119 6330 -1 2306 147 20 5 chr2 214765571 214765973 -35921881 - MSTB LTR MaLR 0 426 19 29 0 0 0 chr2 214766571 214766600 -35921254 + AT_rich Low_complexity Low_complexity 1 29 0 60 27 0 0 chr2 214767340 214767414 -35920440 + AT_rich Low_complexity Low_complexity 1 74 0 40294 39 22 1 chr2 214767469 214773494 -35914360 - L1PA2 LINE L1 0 6155 1 378 287 85 0 chr2 214773972 214774101 -35913753 - MIR SINE MIR -52 210 71 244 415 0 8 chr2 214774167 214774290 -35913564 + MIR3 SINE MIR 6 127 -81 261 242 48 0 chr2 214775096 214775158 -35912696 - MIR SINE MIR -123 139 75 202 163 20 20 chr2 214777790 214777839 -35910015 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 41809 44 2 1 chr2 214778182 214784333 -35903521 - L1PA3 LINE L1 -5 6150 2 387 0 0 0 chr2 214785168 214785211 -35902643 + (CA)n Simple_repeat Simple_repeat 2 44 0 231 186 0 0 chr2 214785530 214785573 -35902281 + (CA)n Simple_repeat Simple_repeat 2 44 0 21 36 0 0 chr2 214787518 214787546 -35900308 + AT_rich Low_complexity Low_complexity 1 28 0 27 29 0 0 chr2 214787610 214787644 -35900210 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr2 214788523 214788552 -35899302 + AT_rich Low_complexity Low_complexity 1 29 0 1223 174 179 75 chr2 214788609 214789033 -35898821 - MLT1D LTR MaLR -37 468 1 841 270 113 19 chr2 214789169 214789209 -35898645 - L1MC4 LINE L1 -192 7850 7815 2219 121 3 3 chr2 214789209 214789515 -35898339 + AluSg SINE Alu 1 306 -4 841 270 113 19 chr2 214789515 214789907 -35897947 - L1MC4 LINE L1 -227 7815 7377 2795 237 20 67 chr2 214789931 214791006 -35896848 - L1ME1 LINE L1 -15 6151 5125 1102 263 168 14 chr2 214791040 214791435 -35896419 + MLT2B1 LTR ERVL 1 364 -33 228 67 0 0 chr2 214791435 214791465 -35896389 + (TA)n Simple_repeat Simple_repeat 1 30 0 1102 263 168 14 chr2 214791465 214791506 -35896348 + MLT2B1 LTR ERVL 364 397 0 1017 287 53 10 chr2 214791508 214791902 -35895952 - L1ME1 LINE L1 -1049 5097 4687 429 308 61 5 chr2 214791898 214791971 -35895883 + L1M4 LINE L1 3602 3670 -2476 * 1927 141 10 7 chr2 214791971 214792276 -35895578 + AluSq SINE Alu 1 306 -7 429 308 61 5 chr2 214792276 214792400 -35895454 + L1M4 LINE L1 3670 3810 -2336 883 245 58 30 chr2 214792411 214792774 -35895080 - L1ME1 LINE L1 -1453 4693 4321 1526 219 38 63 chr2 214792777 214792845 -35895009 + L1MD2 LINE L1 5291 5359 -807 2339 101 0 0 chr2 214792845 214793142 -35894712 + AluY SINE Alu 1 297 -14 1526 219 38 63 chr2 214793142 214793520 -35894334 + L1MD2 LINE L1 5359 5726 -440 446 257 53 13 chr2 214793533 214793681 -35894173 + L1ME1 LINE L1 6021 6333 -1 43459 47 2 4 chr2 214794549 214800716 -35887138 - L1PA4 LINE L1 -3 6152 2 409 228 80 129 chr2 214801466 214801729 -35886125 - MER102a DNA MER1_type 0 330 81 2128 102 3 3 chr2 214802280 214802565 -35885289 + AluSg SINE Alu 1 285 -25 297 0 0 0 chr2 214802608 214802641 -35885213 + (TG)n Simple_repeat Simple_repeat 1 33 0 362 309 33 62 chr2 214804325 214804568 -35883286 + HAL1b LINE L1 278 513 -835 21 0 0 0 chr2 214804614 214804635 -35883219 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 214804941 214804966 -35882888 + AT_rich Low_complexity Low_complexity 1 25 0 35 78 0 0 chr2 214805122 214805199 -35882655 + AT_rich Low_complexity Low_complexity 1 77 0 2466 228 40 17 chr2 214805227 214805827 -35882027 + L1MD2 LINE L1 5735 6348 -11 1541 164 35 9 chr2 214806330 214806647 -35881207 - L1MC/D LINE L1 -664 5578 5254 1982 87 4 0 chr2 214806730 214806995 -35880859 - L1PA7 LINE L1 -515 5639 5374 4008 59 4 0 chr2 214806995 214807499 -35880355 + L1PA7 LINE L1 5645 6151 -3 780 313 116 18 chr2 214807643 214808150 -35879704 - L2 LINE L2 -40 3273 2477 316 205 376 8 chr2 214808151 214808268 -35879586 - L2 LINE L2 -1396 1918 1759 32 43 0 0 chr2 214808577 214808623 -35879231 + AT_rich Low_complexity Low_complexity 1 46 0 16689 34 13 6 chr2 214808678 214811515 -35876339 - L1PA3 LINE L1 -3 6152 3301 213 204 0 58 chr2 214811638 214811741 -35876113 + A-rich Low_complexity Low_complexity 2 98 0 46 0 0 0 chr2 214811741 214811787 -35876067 + AT_rich Low_complexity Low_complexity 1 46 0 356 311 67 21 chr2 214811973 214812166 -35875688 - L1 LINE L1 -1812 4334 4133 1233 112 0 0 chr2 214812679 214812840 -35875014 + AluSp SINE Alu 142 302 -11 402 241 35 14 chr2 214812853 214812994 -35874860 - L1M4 LINE L1 -1131 5015 4872 323 352 51 6 chr2 214813071 214813247 -35874607 - L1M4 LINE L1 -1831 4315 4132 306 318 144 0 chr2 214813406 214813579 -35874275 - L1M4 LINE L1 -2257 3889 3692 817 282 42 81 chr2 214813708 214814236 -35873618 - L1ME3A LINE L1 -287 5883 5377 248 278 31 0 chr2 214814407 214814504 -35873350 + L1ME2 LINE L1 5863 5962 -202 236 75 0 25 chr2 214815957 214815997 -35871857 + (CA)n Simple_repeat Simple_repeat 2 40 0 466 323 82 13 chr2 214816007 214816100 -35871754 - MIR SINE MIR -12 250 165 2624 89 8 8 chr2 214816100 214816461 -35871393 - THE1B LTR MaLR 0 364 4 466 323 82 13 chr2 214816461 214816599 -35871255 - MIR SINE MIR -97 165 3 322 284 39 13 chr2 214816693 214816848 -35871006 - MARNA DNA Mariner -235 351 193 198 0 0 0 chr2 214817430 214817452 -35870402 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 210 118 0 0 chr2 214817718 214817752 -35870102 + (CA)n Simple_repeat Simple_repeat 2 35 0 812 258 16 0 chr2 214817826 214818012 -35869842 - MER5A DNA MER1_type 0 189 1 243 103 0 0 chr2 214818611 214818650 -35869204 + (TA)n Simple_repeat Simple_repeat 1 39 0 34986 54 5 6 chr2 214818650 214823954 -35863900 - L1PA5 LINE L1 -10 6144 849 14320 43 8 16 chr2 214823954 214825747 -35862107 + L1PA5 LINE L1 3577 5355 -799 2147 102 7 7 chr2 214825747 214826040 -35861814 + AluY SINE Alu 5 297 -14 14320 43 8 16 chr2 214826040 214826833 -35861021 + L1PA5 LINE L1 5355 6153 -1 262 307 59 10 chr2 214827111 214827212 -35860642 - LTR33A LTR ERVL 0 523 418 218 93 0 23 chr2 214827903 214827946 -35859908 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 218 259 74 0 chr2 214828283 214828337 -35859517 + L2 LINE L2 3256 3313 0 27 73 0 0 chr2 214828745 214828800 -35859054 + AT_rich Low_complexity Low_complexity 1 55 0 56 0 0 0 chr2 214829293 214829349 -35858505 + AT_rich Low_complexity Low_complexity 1 56 0 25 0 0 0 chr2 214829436 214829461 -35858393 + AT_rich Low_complexity Low_complexity 1 25 0 1003 154 4 114 chr2 214829552 214829825 -35858029 - L1MA10 LINE L1 -11 6323 6081 4748 172 40 69 chr2 214829871 214831286 -35856568 + L1MB1 LINE L1 4121 5476 -692 583 235 9 0 chr2 214831286 214831401 -35856453 + FLAM_C SINE Alu 3 118 -15 4748 172 40 69 chr2 214831401 214831947 -35855907 + L1MB1 LINE L1 5476 6036 -132 43639 41 2 2 chr2 214832288 214838439 -35849415 + L1PA3 LINE L1 1 6154 -1 2937 229 58 30 chr2 214838588 214839638 -35848216 - L1ME1 LINE L1 -3 6163 5076 396 203 77 13 chr2 214839639 214839820 -35848034 - MER106B DNA MER1_type 0 236 6 5176 242 50 64 chr2 214839825 214840575 -35847279 - L1ME1 LINE L1 -1064 5082 4323 1763 178 3 15 chr2 214840575 214840917 -35846937 + L1PA13 LINE L1 5819 6156 -7 5176 242 50 64 chr2 214840917 214842453 -35845401 - L1ME1 LINE L1 -1823 4323 2827 1664 163 58 30 chr2 214844300 214844662 -35843192 - THE1C LTR MaLR -3 372 1 15037 216 54 10 chr2 214845012 214850897 -35836957 + L1PA16 LINE L1 2 6161 -708 1474 143 56 45 chr2 214850997 214851263 -35836591 + THE1B LTR MaLR 96 364 0 2549 155 7 0 chr2 214851265 214851690 -35836164 + L1PA16 LINE L1 6433 6860 -9 23 0 0 0 chr2 214851690 214851713 -35836141 + AT_rich Low_complexity Low_complexity 1 23 0 2278 286 44 50 chr2 214852245 214853131 -35834723 + L1PA15 LINE L1 1 881 -5906 4449 222 27 14 chr2 214853303 214854405 -35833449 + L1PA15 LINE L1 1312 2435 -4362 11368 207 38 11 chr2 214854412 214855749 -35832105 + L1PA15 LINE L1 2969 4268 -2548 441 0 0 0 chr2 214855749 214855798 -35832056 + (CA)n Simple_repeat Simple_repeat 2 50 0 11368 207 38 11 chr2 214855798 214858196 -35829658 + L1PA15 LINE L1 4268 6807 -9 458 33 17 0 chr2 214858196 214858256 -35829598 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 3039 25 0 0 chr2 214860274 214860631 -35827223 + L1PA4 LINE L1 5796 6152 -3 996 325 45 16 chr2 214860714 214861092 -35826762 - L2 LINE L2 -1795 1519 1131 439 301 106 70 chr2 214862215 214862887 -35824967 + L1MB1 LINE L1 2177 2872 -3274 478 318 85 53 chr2 214862979 214863730 -35824124 + L1MB1 LINE L1 3058 3832 -2314 2818 82 3 8 chr2 214864007 214864384 -35823470 + THE1C LTR MaLR 1 375 0 384 202 146 0 chr2 214864707 214864796 -35823058 + Tigger1 DNA MER2_type 2 103 -2315 888 223 11 48 chr2 214864797 214865099 -35822755 + L1MB1 LINE L1 5149 5442 -726 2424 175 44 6 chr2 214865100 214865602 -35822252 + L1MB1 LINE L1 5648 6168 0 13901 135 41 22 chr2 214865604 214866710 -35821144 + Tigger1 DNA MER2_type 1 1085 -1333 2030 129 7 10 chr2 214866710 214867012 -35820842 + AluSx SINE Alu 1 301 -11 13901 135 41 22 chr2 214867012 214868278 -35819576 + Tigger1 DNA MER2_type 1085 2418 0 234 0 0 0 chr2 214868278 214868304 -35819550 + (CATA)n Simple_repeat Simple_repeat 3 28 0 199 158 26 0 chr2 214869291 214869329 -35818525 + MIR SINE MIR 110 148 -114 294 244 89 0 chr2 214869338 214869428 -35818426 - MIR SINE MIR -3 259 162 21 0 0 0 chr2 214870221 214870242 -35817612 + AT_rich Low_complexity Low_complexity 1 21 0 255 103 0 0 chr2 214870245 214870284 -35817570 + (TG)n Simple_repeat Simple_repeat 1 39 0 202 217 22 0 chr2 214870284 214870330 -35817524 + GA-rich Low_complexity Low_complexity 2 48 0 21 57 0 0 chr2 214870873 214870908 -35816946 + AT_rich Low_complexity Low_complexity 1 35 0 1507 158 103 33 chr2 214872828 214873226 -35814628 + LTR37A LTR ERV1 1 426 0 266 281 21 123 chr2 214873457 214873692 -35814162 + MLT1L LTR MaLR 1 211 -404 326 284 21 21 chr2 214873876 214874017 -35813837 + MLT1K LTR MaLR 448 588 0 25 0 0 0 chr2 214874171 214874196 -35813658 + AT_rich Low_complexity Low_complexity 1 25 0 332 293 120 16 chr2 214874667 214874858 -35812996 + L1ME LINE L1 5390 5600 -521 280 327 95 12 chr2 214874904 214875072 -35812782 + L1ME LINE L1 5682 5863 -258 261 221 0 15 chr2 214875535 214875603 -35812251 + L1MC/D LINE L1 5705 5771 -2037 1647 228 34 4 chr2 214875610 214876056 -35811798 + MER89 LTR ERV1 1 559 0 393 343 45 16 chr2 214876167 214876549 -35811305 + L1ME3A LINE L1 5565 5957 -213 3091 227 39 23 chr2 214876804 214878089 -35809765 + L1ME1 LINE L1 4639 6088 -78 1996 138 5 115 chr2 214878089 214878111 -35809743 + MLT1B LTR MaLR 2 25 -365 2062 151 122 8 chr2 214878111 214878495 -35809359 - MSTA LTR MaLR 0 428 1 1996 138 5 115 chr2 214878495 214878906 -35808948 + MLT1B LTR MaLR 25 387 -3 21 0 0 0 chr2 214879015 214879036 -35808818 + AT_rich Low_complexity Low_complexity 1 21 0 2162 80 7 40 chr2 214881094 214881393 -35806461 + AluY SINE Alu 1 289 -22 300 172 188 0 chr2 214881908 214881972 -35805882 - MLT1C LTR MaLR 0 467 392 2121 160 49 20 chr2 214881973 214882379 -35805475 - MLT1C LTR MaLR -49 418 1 1732 153 0 0 chr2 214882452 214882746 -35805108 + L1PA15 LINE L1 4606 4899 -1247 2175 154 36 28 chr2 214882746 214883292 -35804562 + MLT2A2 LTR ERVL 1 554 0 5676 118 19 3 chr2 214883295 214884552 -35803302 + L1PA15 LINE L1 4898 6165 0 916 216 0 5 chr2 214885142 214885332 -35802522 + MER5A DNA MER1_type 1 189 0 209 302 156 21 chr2 214885681 214885777 -35802077 + MER5B DNA MER1_type 38 146 -32 482 275 106 25 chr2 214886063 214886296 -35801558 - MIR SINE MIR -13 249 7 415 281 260 20 chr2 214886480 214886676 -35801178 - MIR SINE MIR -10 252 10 455 257 9 0 chr2 214886887 214886992 -35800862 - MLT1F1 LTR MaLR -7 535 430 559 255 63 64 chr2 214887003 214887288 -35800566 - MLT1F1 LTR MaLR -265 302 19 1224 179 123 47 chr2 214887425 214887743 -35800111 - MER2 DNA MER2_type -1 343 2 4980 31 0 0 chr2 214887893 214888481 -35799373 + L1PA4 LINE L1 5565 6152 -3 332 187 317 0 chr2 214888490 214888613 -35799241 + MER69 DNA AcHobo 2277 2438 -88 225 351 11 0 chr2 214889542 214889636 -35798218 - MIR SINE MIR -137 125 31 810 176 12 0 chr2 214889701 214889888 -35797966 - L1PA12 LINE L1 0 6168 6001 185 338 28 42 chr2 214890049 214890120 -35797734 - MER5B DNA MER1_type -57 121 52 24 53 0 0 chr2 214890221 214890259 -35797595 + AT_rich Low_complexity Low_complexity 1 38 0 4824 60 10 2 chr2 214890387 214891006 -35796848 + L1PA7 LINE L1 5530 6153 -1 1116 211 92 43 chr2 214891169 214891533 -35796321 + L1MC4 LINE L1 7276 7655 -387 1193 271 82 11 chr2 214892341 214892718 -35795136 + Charlie1a DNA MER1_type 6 409 -1046 1792 234 94 44 chr2 214892721 214893316 -35794538 + MLT1E2 LTR MaLR 1 625 -1 3121 202 41 13 chr2 214893317 214894066 -35793788 + Charlie1a DNA MER1_type 408 1177 -278 590 253 0 14 chr2 214894070 214894216 -35793638 + L1PA11 LINE L1 7 150 -7431 * 9648 143 25 24 chr2 214894205 214895960 -35791894 + L1PA11 LINE L1 4011 5767 -1817 5696 113 29 5 chr2 214895960 214897529 -35790325 + L1PA11 LINE L1 6009 7610 -2 758 194 126 4 chr2 214897546 214897793 -35790061 + Charlie1a DNA MER1_type 1164 1440 -15 41074 63 3 4 chr2 214898148 214904307 -35783547 + L1PA5 LINE L1 2 6154 0 12738 188 27 21 chr2 214904536 214908315 -35779539 + L1PA15 LINE L1 2256 6046 -119 1197 158 0 53 chr2 214908315 214908524 -35779330 + AluJb SINE Alu 94 291 -21 399 94 62 0 chr2 214908532 214908596 -35779258 + L1PA15 LINE L1 6092 6159 -6 3759 140 21 3 chr2 214910200 214910780 -35777074 + MER50 LTR ERV1 133 722 -12 895 287 55 43 chr2 214910883 214911304 -35776550 + LTR16A LTR ERVL 25 450 0 21 0 0 0 chr2 214912078 214912099 -35775755 + AT_rich Low_complexity Low_complexity 1 21 0 1563 282 27 16 chr2 214912235 214912685 -35775169 - LTR40a LTR ERVL -62 457 3 1944 155 13 7 chr2 214915600 214915909 -35771945 - AluSx SINE Alu -1 311 1 381 353 64 0 chr2 214916268 214916424 -35771430 - L2 LINE L2 -4 3268 3103 767 309 48 46 chr2 214916776 214917148 -35770706 + MLT1K LTR MaLR 216 588 0 2237 116 3 0 chr2 214917605 214917916 -35769938 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 214918180 214918202 -35769652 + AT_rich Low_complexity Low_complexity 1 22 0 1028 243 60 73 chr2 214918355 214918725 -35769129 + MLT1A1 LTR MaLR 1 365 0 339 229 101 28 chr2 214920063 214920172 -35767682 - HERV16 LTR ERVL -3129 1867 1751 1527 330 40 10 chr2 214920266 214920862 -35766992 - HERV16 LTR ERVL -3420 1576 963 204 135 27 0 chr2 214920868 214920905 -35766949 + T-rich Low_complexity Low_complexity 5 42 0 8582 34 2 0 chr2 214920908 214922708 -35765146 - L1PA3 LINE L1 -3 6152 4350 272 329 27 34 chr2 214922710 214922859 -35764995 - HERV16 LTR ERVL -4028 968 821 3133 251 114 42 chr2 214922990 214924195 -35763659 + L1ME2 LINE L1 3275 4649 -1497 6295 52 9 0 chr2 214924195 214924977 -35762877 + L1PA7 LINE L1 5364 6152 -2 3133 251 114 42 chr2 214924977 214925535 -35762319 + L1ME2 LINE L1 4649 5165 -981 1094 234 35 44 chr2 214925536 214926195 -35761659 + L1ME2 LINE L1 5305 6020 -144 230 147 0 0 chr2 214926195 214926229 -35761625 + MER3 DNA MER1_type 16 49 -160 293 243 12 3 chr2 214926229 214926329 -35761525 + L1ME3 LINE L1 6064 6162 -4 32 26 0 0 chr2 214927905 214927944 -35759910 + AT_rich Low_complexity Low_complexity 1 39 0 311 215 0 9 chr2 214928292 214928399 -35759455 + (TGGA)n Simple_repeat Simple_repeat 4 109 0 225 224 9 112 chr2 214928440 214928556 -35759298 - L1ME3A LINE L1 -105 6065 5962 1371 270 116 8 chr2 214928607 214929243 -35758611 - L1ME3A LINE L1 -208 5962 5258 1011 145 11 0 chr2 214929291 214929477 -35758377 - L1MA7 LINE L1 -2 6289 6102 306 354 0 62 chr2 214929481 214929676 -35758178 - L1ME3A LINE L1 -1749 4397 4215 1089 249 60 69 chr2 214929692 214930391 -35757463 - L1ME3A LINE L1 -1910 4236 3544 21 0 0 0 chr2 214930493 214930514 -35757340 + AT_rich Low_complexity Low_complexity 1 21 0 201 74 0 0 chr2 214930901 214930928 -35756926 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 1765 273 41 25 chr2 214931556 214932336 -35755518 + L2 LINE L2 2510 3301 -12 28 0 0 0 chr2 214933032 214933060 -35754794 + AT_rich Low_complexity Low_complexity 1 28 0 284 309 83 0 chr2 214933085 214933169 -35754685 - MIR3 SINE MIR -51 157 67 1841 115 49 21 chr2 214933853 214934140 -35753714 + AluSx SINE Alu 1 295 -17 2640 112 6 68 chr2 214934182 214934683 -35753171 - L1MA4A LINE L1 0 6303 5834 26 0 0 0 chr2 214934813 214934839 -35753015 + AT_rich Low_complexity Low_complexity 1 26 0 1323 151 14 5 chr2 214934858 214935076 -35752778 - AluJo SINE Alu -43 269 50 805 157 13 0 chr2 214935213 214935366 -35752488 + L1MA4A LINE L1 6042 6196 -107 1348 252 124 24 chr2 214935804 214936224 -35751630 + MLT1H1 LTR MaLR 71 532 -23 255 316 32 68 chr2 214936372 214936562 -35751292 + MLT1H1-int LTR MaLR 290 472 -899 256 204 184 29 chr2 214939330 214939433 -35748421 - L1MC5 LINE L1 -44 7917 7799 474 289 53 24 chr2 214939436 214939644 -35748210 - L1MC/D LINE L1 -2007 5801 5588 783 259 20 10 chr2 214939647 214939844 -35748010 + MLT1H LTR MaLR 1 199 -350 1534 140 100 22 chr2 214939848 214940119 -35747735 + THE1B LTR MaLR 73 364 0 268 261 0 98 chr2 214940393 214940485 -35747369 + L2 LINE L2 3226 3308 -5 309 252 54 27 chr2 214941094 214941205 -35746649 + MIR SINE MIR 34 147 -115 398 211 323 8 chr2 214941425 214941558 -35746296 + MIR SINE MIR 83 257 -5 1238 155 53 12 chr2 214943019 214943069 -35744785 - MLT2C2 LTR ERVL 0 464 418 225 0 0 0 chr2 214943069 214943094 -35744760 + (GA)n Simple_repeat Simple_repeat 2 26 0 1238 155 53 12 chr2 214943094 214943288 -35744566 - MLT2C2 LTR ERVL -46 418 210 232 224 0 0 chr2 214943288 214943337 -35744517 - MLT2B3 LTR ERVL 0 554 506 485 82 64 9 chr2 214943345 214943455 -35744399 + (TAGA)n Simple_repeat Simple_repeat 3 118 0 1980 212 44 46 chr2 214943466 214943970 -35743884 - MLT2B3 LTR ERVL -51 503 1 1134 164 10 0 chr2 214943974 214944182 -35743672 - MLT2C2 LTR ERVL -254 210 1 242 333 21 0 chr2 214944190 214944283 -35743571 + MLT1L LTR MaLR 105 199 -416 379 225 0 0 chr2 214944378 214944458 -35743396 + MSTD LTR MaLR 1 80 -348 2035 168 184 52 chr2 214944458 214945151 -35742703 - LTR1B LTR ERV1 0 826 1 1315 189 39 42 chr2 214945158 214945465 -35742389 + MSTD LTR MaLR 84 389 -7 292 234 65 19 chr2 214945663 214945770 -35742084 + MLT1L LTR MaLR 497 608 -7 237 240 0 0 chr2 214946384 214946434 -35741420 + LTR16B LTR ERVL 409 458 -6 2299 109 0 6 chr2 214946506 214946817 -35741037 + AluSg SINE Alu 1 309 -1 609 257 0 0 chr2 214947145 214947324 -35740530 + (TA)n Simple_repeat Simple_repeat 2 180 0 314 296 23 0 chr2 214947329 214947417 -35740437 - L1MC4 LINE L1 -1339 6703 6614 325 311 0 0 chr2 214947431 214947521 -35740333 - L1MC4 LINE L1 -1339 6703 6614 331 153 0 0 chr2 214947573 214947632 -35740222 - L1P LINE L1 -955 5191 5133 212 163 0 20 chr2 214947632 214947681 -35740173 + (TA)n Simple_repeat Simple_repeat 1 48 0 276 289 158 12 chr2 214948933 214949262 -35738592 + L1MC4a LINE L1 5761 6137 -1671 324 271 71 65 chr2 214949686 214949841 -35738013 - L2 LINE L2 -8 3305 3150 590 217 46 79 chr2 214949856 214949942 -35737912 - LTR37A LTR ERV1 0 426 339 5449 82 4 7 chr2 214949942 214950685 -35737169 - L1PA14 LINE L1 -9 6152 5412 590 217 46 79 chr2 214950685 214950902 -35736952 - LTR37A LTR ERV1 -87 339 133 290 87 0 0 chr2 214951979 214952025 -35735829 - MADE1 DNA Mariner -34 46 1 21 57 0 0 chr2 214953692 214953727 -35734127 + AT_rich Low_complexity Low_complexity 1 35 0 545 277 85 13 chr2 214954640 214954875 -35732979 + L2 LINE L2 2807 3058 -255 385 221 157 108 chr2 214954878 214955127 -35732727 + MIR SINE MIR 1 261 -1 231 223 32 166 chr2 214956062 214956219 -35731635 + MIR SINE MIR 13 148 -114 668 174 0 0 chr2 214956221 214956330 -35731524 + FLAM_C SINE Alu 3 111 -32 860 150 29 104 chr2 214956335 214956459 -35731395 - L1M2 LINE L1 -734 5578 5479 2162 135 0 0 chr2 214956459 214956763 -35731091 - AluJo SINE Alu -8 304 1 860 150 29 104 chr2 214956763 214956878 -35730976 - L1M2 LINE L1 -833 5479 5357 2354 89 3 3 chr2 214956878 214957182 -35730672 - AluSx SINE Alu 0 312 9 25 0 0 0 chr2 214957194 214957219 -35730635 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 214957366 214957387 -35730467 + AT_rich Low_complexity Low_complexity 1 21 0 1191 128 17 104 chr2 214958140 214958428 -35729426 - L1M2 LINE L1 -780 5366 5104 362 181 48 0 chr2 214958432 214958515 -35729339 - L1M4 LINE L1 -1724 4422 4336 302 311 43 57 chr2 214958513 214958722 -35729132 - L1MCb LINE L1 -5802 243 38 * 186 43 0 0 chr2 214958748 214958771 -35729083 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 3539 172 29 11 chr2 214958787 214959485 -35728369 - MER67C LTR ERV1 0 710 1 264 321 8 20 chr2 214959777 214959912 -35727942 - MIR SINE MIR -21 241 48 327 322 63 23 chr2 214960232 214960406 -35727448 + L2 LINE L2 3132 3312 -1 193 365 0 0 chr2 214960483 214960546 -35727308 - MIR3 SINE MIR -31 177 115 1863 142 105 15 chr2 214961860 214962192 -35725662 + THE1B LTR MaLR 1 362 -2 11800 98 5 0 chr2 214962194 214963766 -35724088 + THE1B-int LTR MaLR 1 1580 0 758 92 25 0 chr2 214963767 214963886 -35723968 - THE1-int LTR MaLR -1222 358 237 1667 142 110 22 chr2 214963886 214964204 -35723650 + THE1B LTR MaLR 19 364 0 451 295 121 8 chr2 214964315 214964474 -35723380 - MIR SINE MIR -75 187 19 764 247 151 13 chr2 214964496 214964954 -35722900 - MER113 DNA MER1_type? 0 521 1 22 0 0 0 chr2 214965208 214965230 -35722624 + AT_rich Low_complexity Low_complexity 1 22 0 193 298 18 0 chr2 214965342 214965399 -35722455 - MIR SINE MIR -108 154 97 180 333 167 16 chr2 214965398 214965524 -35722330 - MIR3 SINE MIR -6 202 58 * 218 287 104 35 chr2 214965637 214965752 -35722102 + MIR SINE MIR 132 254 -8 202 291 25 0 chr2 214965763 214965842 -35722012 + (TAG)n Simple_repeat Simple_repeat 3 83 0 209 335 0 108 chr2 214965889 214966056 -35721798 - L2 LINE L2 -190 3082 2934 246 236 18 0 chr2 214967034 214967089 -35720765 - MIR3 SINE MIR -3 205 150 262 315 20 47 chr2 214968587 214968736 -35719118 - L2 LINE L2 0 3313 3169 282 288 76 38 chr2 214968741 214968873 -35718981 - L2 LINE L2 -225 3047 2911 786 77 31 23 chr2 214968971 214969101 -35718753 + L1PB2 LINE L1 6021 6151 0 612 145 0 0 chr2 214969368 214969499 -35718355 + (CTA)n Simple_repeat Simple_repeat 1 131 0 914 211 117 0 chr2 214969750 214969973 -35717881 - MLT1D LTR MaLR -42 463 215 724 231 56 10 chr2 214970222 214970417 -35717437 + MIR SINE MIR 1 204 -58 248 351 65 43 chr2 214971204 214971389 -35716465 + MIR SINE MIR 4 192 -70 2206 117 27 0 chr2 214972698 214972998 -35714856 - AluSx SINE Alu -4 308 1 7164 42 30 0 chr2 214973706 214974577 -35713277 - MER11D LTR ERVK 0 897 1 731 130 8 16 chr2 214975824 214975947 -35711907 - L1MD2 LINE L1 -13 6346 6225 23 33 0 0 chr2 214976180 214976210 -35711644 + AT_rich Low_complexity Low_complexity 1 30 0 244 254 135 16 chr2 214976251 214976377 -35711477 + MIR SINE MIR 51 191 -71 237 160 100 0 chr2 214977117 214977166 -35710688 - LTR37A LTR ERV1 -242 184 131 1407 257 85 54 chr2 214977166 214977741 -35710113 + MLT1E LTR MaLR 1 593 0 213 370 0 12 chr2 214978732 214978813 -35709041 - MIR3 SINE MIR -119 89 10 1209 266 97 20 chr2 214979043 214979560 -35708294 - MLT1F1 LTR MaLR -1 566 13 1325 136 5 27 chr2 214980167 214980387 -35707467 + AluJo SINE Alu 87 301 -11 615 296 123 44 chr2 214981068 214981731 -35706123 + L2 LINE L2 2588 3312 -1 3452 111 28 24 chr2 214982888 214983464 -35704390 - LTR19B LTR ERV1 -2 578 1 2938 157 79 18 chr2 214983808 214984406 -35703448 - MER67B LTR ERV1 -27 634 1 300 242 208 20 chr2 214984510 214984659 -35703195 + MIR SINE MIR 83 259 -3 641 283 103 21 chr2 214986142 214986375 -35701479 - MIR SINE MIR -10 252 1 2305 96 0 0 chr2 214986419 214986711 -35701143 + AluY SINE Alu 1 292 -19 239 272 53 35 chr2 214987187 214987301 -35700553 + MIR SINE MIR 97 212 -50 342 327 47 0 chr2 214987608 214987715 -35700139 - L2 LINE L2 0 3272 3161 693 184 18 0 chr2 214987772 214987886 -35699968 - FLAM_A SINE Alu -17 116 1 284 323 24 8 chr2 214988032 214988159 -35699695 + Charlie8 DNA MER1_type 1 129 -2288 2609 36 0 0 chr2 214988663 214988972 -35698882 + L1PA5 LINE L1 5845 6153 -1 356 342 124 5 chr2 214989250 214989443 -35698411 - MIR SINE MIR -25 237 22 946 217 73 83 chr2 214990615 214990723 -35697131 + L1MD3 LINE L1 7590 7698 -297 2420 90 0 0 chr2 214990723 214991024 -35696830 + AluSg SINE Alu 1 301 -9 946 217 73 83 chr2 214991024 214991325 -35696529 + L1MD3 LINE L1 7698 7995 0 30 0 0 0 chr2 214992329 214992359 -35695495 + AT_rich Low_complexity Low_complexity 1 30 0 2738 97 19 30 chr2 214992359 214992461 -35695393 - L1PB3 LINE L1 -9 6145 6043 3327 128 17 15 chr2 214992461 214992985 -35694869 - MER1A DNA MER1_type 0 527 3 2738 97 19 30 chr2 214992985 214993314 -35694540 - L1PB3 LINE L1 -111 6043 5719 1503 160 25 3 chr2 214993684 214993966 -35693888 - L1MC1 LINE L1 -1 6612 6325 7804 217 31 26 chr2 214993970 214996240 -35691614 - L1MC1 LINE L1 -743 5683 3451 6354 91 22 19 chr2 214996240 214997154 -35690700 - L1PA10 LINE L1 0 6168 5245 2321 100 0 0 chr2 214997154 214997454 -35690400 - AluSx SINE Alu -4 308 9 6354 91 22 19 chr2 214997454 214997837 -35690017 - L1PA10 LINE L1 -923 5245 4865 7804 217 31 26 chr2 214997837 214997901 -35689953 - L1MC1 LINE L1 -2975 3451 3389 5308 145 17 4 chr2 214997923 214999412 -35688442 - L1PA16 LINE L1 -2 6164 4675 1342 227 0 3 chr2 214999413 214999726 -35688128 + L1 LINE L1 4299 4610 -1536 2962 259 2 5 chr2 214999727 215000553 -35687301 - L1MC1 LINE L1 -3016 3410 2587 * 3886 150 23 4 chr2 215000551 215001277 -35686577 - L1MC1 LINE L1 -4795 1631 892 406 286 29 0 chr2 215001812 215001917 -35685937 - MIR SINE MIR -58 204 97 197 288 91 45 chr2 215002177 215002309 -35685545 + L3 LINE CR1 1361 1498 -79 344 343 55 30 chr2 215002488 215002689 -35685165 + MLT1K LTR MaLR 14 219 -369 375 251 195 15 chr2 215002997 215003192 -35684662 - L2 LINE L2 -5 3308 3079 421 355 95 23 chr2 215003257 215003561 -35684293 - L2 LINE L2 -164 3149 2824 262 298 96 10 chr2 215003658 215003762 -35684092 - L2 LINE L2 -6 3266 3154 25 0 0 0 chr2 215004451 215004476 -35683378 + AT_rich Low_complexity Low_complexity 1 25 0 246 263 191 13 chr2 215005450 215005602 -35682252 - L1ME1 LINE L1 -23 6143 5965 308 203 14 0 chr2 215005638 215005707 -35682147 - L1ME1 LINE L1 -280 5884 5815 2465 141 51 10 chr2 215005707 215006118 -35681736 - MSTA LTR MaLR 0 428 1 5443 172 28 7 chr2 215006118 215007488 -35680366 - MSTA-int LTR MaLR 0 1651 1 2839 121 17 0 chr2 215007488 215007909 -35679945 - MSTA LTR MaLR 0 428 1 1221 233 39 39 chr2 215007911 215008246 -35679608 - L1ME1 LINE L1 -353 5813 5479 4341 212 54 68 chr2 215008722 215009782 -35678072 - L1ME1 LINE L1 -713 5449 4423 2131 125 7 3 chr2 215009782 215010079 -35677775 - AluSx SINE Alu -14 298 1 4341 212 54 68 chr2 215010079 215010731 -35677123 - L1ME1 LINE L1 -1739 4423 3763 31584 108 13 57 chr2 215010737 215011066 -35676788 - L1PA7 LINE L1 -6 6148 5806 2443 67 0 10 chr2 215011066 215011365 -35676489 - AluY SINE Alu -15 296 1 31584 108 13 57 chr2 215011365 215017473 -35670381 - L1PA7 LINE L1 -348 5806 6 3111 128 44 6 chr2 215017619 215018104 -35669750 - L1MA5A LINE L1 -12 6285 5777 231 36 0 0 chr2 215018104 215018132 -35669722 + (TA)n Simple_repeat Simple_repeat 1 28 0 3111 128 44 6 chr2 215018132 215018169 -35669685 - L1MA5A LINE L1 -520 5777 5743 1291 262 77 18 chr2 215018169 215018487 -35669367 - L1ME1 LINE L1 -2472 3674 3376 2011 141 3 3 chr2 215018487 215018785 -35669069 - AluSx SINE Alu -14 298 1 1291 262 77 18 chr2 215018785 215019092 -35668762 - L1ME1 LINE L1 -2770 3376 3012 353 185 86 0 chr2 215019091 215019172 -35668682 - L1MA3 LINE L1 -270 6035 5948 * 1676 112 8 4 chr2 215019172 215019439 -35668415 + L1MA4 LINE L1 6016 6283 -17 1278 204 21 37 chr2 215019460 215019613 -35668241 - L1ME1 LINE L1 -3112 3034 2880 512 206 0 0 chr2 215019613 215019715 -35668139 + L1PB4 LINE L1 6042 6143 -13 1278 204 21 37 chr2 215019715 215019944 -35667910 - L1ME1 LINE L1 -3266 2880 2658 380 226 25 69 chr2 215020411 215020532 -35667322 + L1ME2 LINE L1 5985 6099 -65 1812 148 14 7 chr2 215020532 215020822 -35667032 + AluSx SINE Alu 1 292 -20 380 226 25 69 chr2 215020822 215020859 -35666995 + L1ME2 LINE L1 6099 6136 -28 270 219 78 0 chr2 215020834 215020898 -35666956 + L1MEc LINE L1 1842 1910 -4486 * 525 165 78 0 chr2 215020958 215021073 -35666781 - AluSg/x SINE Alu -8 301 178 3057 193 127 2 chr2 215021093 215021724 -35666130 - MER52A LTR ERV1 -650 1105 396 416 111 0 16 chr2 215021724 215021809 -35666045 - Alu SINE Alu 0 311 235 792 178 63 99 chr2 215021814 215022067 -35665787 - MER52A LTR ERV1 -1511 244 1 906 173 75 108 chr2 215023337 215023735 -35664119 + Charlie1 DNA MER1_type 2346 2730 -31 14725 136 24 7 chr2 215024093 215025542 -35662312 + Tigger1 DNA MER2_type 1 1509 -909 723 96 22 0 chr2 215025542 215025678 -35662176 + (TA)n Simple_repeat Simple_repeat 1 139 0 14725 136 24 7 chr2 215025678 215026605 -35661249 + Tigger1 DNA MER2_type 1509 2418 0 3640 139 28 39 chr2 215026834 215027089 -35660765 + L1PA16 LINE L1 5525 5781 -385 2529 129 0 0 chr2 215027089 215027453 -35660401 - THE1B LTR MaLR 0 364 1 10148 109 48 7 chr2 215027453 215028970 -35658884 - THE1B-int LTR MaLR 0 1580 1 2396 139 0 6 chr2 215028970 215029336 -35658518 - THE1B LTR MaLR 0 364 1 3640 139 28 39 chr2 215029336 215029552 -35658302 + L1PA16 LINE L1 5779 5992 -174 2452 65 3 3 chr2 215029552 215029858 -35657996 + AluY SINE Alu 1 306 -5 3640 139 28 39 chr2 215029858 215030032 -35657822 + L1PA16 LINE L1 5992 6166 0 21 57 0 0 chr2 215030635 215030670 -35657184 + AT_rich Low_complexity Low_complexity 1 35 0 312 155 0 0 chr2 215030899 215030970 -35656884 + GA-rich Low_complexity Low_complexity 2 72 0 22 35 0 0 chr2 215031352 215031381 -35656473 + AT_rich Low_complexity Low_complexity 1 29 0 226 234 16 31 chr2 215031464 215031528 -35656326 - MER106A DNA MER1_type -173 63 1 2415 72 0 13 chr2 215031613 215031918 -35655936 + AluY SINE Alu 1 301 -10 282 77 0 0 chr2 215032337 215032376 -35655478 - L1MC3 LINE L1 -169 7616 7578 3044 102 30 13 chr2 215032394 215032866 -35654988 - L1PA13 LINE L1 -6 6157 5678 493 201 50 45 chr2 215033284 215033500 -35654354 - LTR45 LTR ERV1 0 525 264 515 115 13 0 chr2 215033830 215033908 -35653946 + MADE1 DNA Mariner 1 79 -1 2220 196 42 67 chr2 215034049 215034615 -35653239 - MLT2B3 LTR ERVL -2 552 1 422 256 12 38 chr2 215035563 215035723 -35652131 + Tigger8 DNA MER2_type 226 381 -285 22 0 0 0 chr2 215036072 215036094 -35651760 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 215036556 215036584 -35651270 + AT_rich Low_complexity Low_complexity 1 28 0 274 281 52 83 chr2 215036905 215037010 -35650844 - MIR SINE MIR -56 206 108 1501 237 104 18 chr2 215037010 215037462 -35650392 + LTR16C LTR ERVL 1 491 0 274 281 52 83 chr2 215037462 215037538 -35650316 - MIR SINE MIR -154 108 31 232 302 58 50 chr2 215039119 215039258 -35648596 - MLT1H LTR MaLR -397 152 13 1693 181 65 76 chr2 215039733 215040005 -35647849 - LTR40b LTR ERVL -4 458 192 2032 132 0 23 chr2 215040005 215040309 -35647545 - AluSp SINE Alu -16 297 1 1693 181 65 76 chr2 215040309 215040499 -35647355 - LTR40b LTR ERVL -270 192 1 1184 237 84 39 chr2 215040595 215041010 -35646844 + MLT2C2 LTR ERVL 1 438 -26 360 0 0 0 chr2 215041010 215041050 -35646804 + (TG)n Simple_repeat Simple_repeat 2 41 0 1184 237 84 39 chr2 215041050 215041072 -35646782 + MLT2C2 LTR ERVL 438 458 -6 645 265 104 9 chr2 215041104 215041334 -35646520 - MIR SINE MIR -10 252 1 1868 135 40 0 chr2 215041355 215041652 -35646202 - MER7A DNA MER2_type 0 346 40 577 280 49 21 chr2 215041652 215041938 -35645916 - L1M4c LINE L1 -4017 1955 1662 2034 151 14 0 chr2 215042009 215042385 -35645469 - L1MB1 LINE L1 -17 6172 5786 387 192 0 0 chr2 215042389 215042467 -35645387 + CT-rich Low_complexity Low_complexity 2 79 0 2082 136 0 7 chr2 215042496 215042798 -35645056 - AluSc SINE Alu -9 300 1 2276 113 0 3 chr2 215042807 215043107 -35644747 - AluSg SINE Alu -11 299 1 2921 278 70 27 chr2 215043137 215044990 -35642864 - L1M4c LINE L1 -4516 1375 9 3704 200 12 25 chr2 215045014 215045964 -35641890 + L1MC3 LINE L1 5210 5403 -743 222 86 0 86 chr2 215047066 215047124 -35640730 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 710 327 72 32 chr2 215047447 215047823 -35640031 + MLT1K LTR MaLR 18 408 -180 224 51 0 51 chr2 215047826 215047865 -35639989 + (TTTC)n Simple_repeat Simple_repeat 3 39 0 1927 135 9 18 chr2 215047865 215048192 -35639662 - L1PA16 LINE L1 0 6166 5843 3844 132 45 44 chr2 215048666 215049392 -35638462 - LTR8A LTR ERV1 0 727 1 241 216 20 0 chr2 215049648 215049699 -35638155 + MER5A DNA MER1_type 136 187 -2 200 319 143 34 chr2 215049710 215049829 -35638025 + MER5B DNA MER1_type 3 134 -44 2489 49 3 0 chr2 215049931 215050235 -35637619 - AluY SINE Alu -2 309 5 2035 77 7 4 chr2 215050323 215050596 -35637258 + AluSp SINE Alu 35 308 -5 247 358 0 0 chr2 215050616 215050697 -35637157 - L2 LINE L2 -20 3252 3172 192 77 0 0 chr2 215051377 215051403 -35636451 + (T)n Simple_repeat Simple_repeat 1 26 0 24 32 0 0 chr2 215051435 215051466 -35636388 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr2 215051595 215051623 -35636231 + AT_rich Low_complexity Low_complexity 1 28 0 849 197 193 68 chr2 215051825 215051893 -35635961 - MLT1E1 LTR MaLR -1 653 595 2200 91 3 3 chr2 215051893 215052179 -35635675 + AluY SINE Alu 1 286 -25 849 197 193 68 chr2 215052179 215052626 -35635228 - MLT1E1 LTR MaLR -59 595 25 2079 148 32 51 chr2 215052626 215053182 -35634672 - MLT2A2 LTR ERVL 0 554 3 834 149 32 19 chr2 215053312 215053466 -35634388 + MLT1B LTR MaLR 1 156 -218 1890 129 45 55 chr2 215053519 215053898 -35633956 - THE1C LTR MaLR 0 375 1 7682 159 29 56 chr2 215053898 215055516 -35632338 - THE1C-int LTR MaLR 0 1580 6 2787 147 67 100 chr2 215055906 215056607 -35631247 - THE1-int LTR MaLR -899 681 4 967 183 5 0 chr2 215056621 215056807 -35631047 + MLT1B LTR MaLR 204 390 0 21 57 0 0 chr2 215056927 215056962 -35630892 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 215057373 215057394 -35630460 + AT_rich Low_complexity Low_complexity 1 21 0 21 82 0 0 chr2 215057749 215057798 -35630056 + AT_rich Low_complexity Low_complexity 1 49 0 1926 265 154 18 chr2 215057975 215058165 -35629689 - L2 LINE L2 0 3313 3150 2087 121 0 0 chr2 215058165 215058445 -35629409 + AluSx SINE Alu 1 280 -32 408 20 0 0 chr2 215058445 215058494 -35629360 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 1926 265 154 18 chr2 215058494 215059364 -35628490 - L2 LINE L2 -162 3151 2109 1951 161 161 24 chr2 215059413 215059911 -35627943 - LTR49 LTR ERV1 -29 566 1 814 275 44 25 chr2 215059911 215060227 -35627627 - L2 LINE L2 -1380 1934 1613 863 320 125 19 chr2 215060692 215061157 -35626697 - L2 LINE L2 -1797 1517 1004 2397 94 3 0 chr2 215061555 215061864 -35625990 + AluSp SINE Alu 2 311 -2 802 316 151 9 chr2 215061968 215062499 -35625355 - L2 LINE L2 -2452 862 257 250 293 0 0 chr2 215063461 215063560 -35624294 - TAR1 Satellite telomeric -1833 278 180 2800 170 19 24 chr2 215063652 215064240 -35623614 - LTR60 LTR ERV1 -1 585 1 379 289 215 0 chr2 215064240 215064361 -35623493 - MER91B DNA MER1_type -18 172 26 359 233 0 0 chr2 215064864 215064954 -35622900 + L1ME LINE L1 5684 5773 -348 22 0 0 0 chr2 215065024 215065046 -35622808 + AT_rich Low_complexity Low_complexity 1 22 0 1617 185 37 0 chr2 215065055 215065352 -35622502 + AluJb SINE Alu 3 310 -2 3634 174 8 6 chr2 215065801 215066428 -35621426 + L1M1 LINE L1 13 640 -6925 13270 151 24 9 chr2 215066430 215069994 -35617860 + L1M1 LINE L1 2725 6346 -1219 198 103 0 0 chr2 215069994 215070023 -35617831 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 2077 127 40 9 chr2 215070265 215070736 -35617118 - L1P LINE L1 -736 5427 4949 4661 92 31 25 chr2 215070749 215070793 -35617061 + L1PA12 LINE L1 5444 5486 -682 2134 143 0 0 chr2 215070793 215071094 -35616760 + AluSx SINE Alu 1 301 -11 4661 92 31 25 chr2 215071094 215071420 -35616434 + L1PA12 LINE L1 5486 5809 -359 2325 92 3 3 chr2 215071420 215071723 -35616131 + AluSq SINE Alu 3 305 -8 4661 92 31 25 chr2 215071723 215072069 -35615785 + L1PA12 LINE L1 5809 6165 -3 280 222 37 25 chr2 215073369 215073450 -35614404 + MIR SINE MIR 38 119 -89 774 260 123 31 chr2 215074411 215074783 -35613071 + LTR33 LTR ERVL 81 519 -2 284 254 28 0 chr2 215075002 215075073 -35612781 + L2 LINE L2 3196 3268 -4 777 220 68 0 chr2 215075790 215075967 -35611887 + MER5A DNA MER1_type 1 189 0 238 279 16 0 chr2 215076792 215076853 -35611001 - MER5A DNA MER1_type 0 189 128 259 103 26 0 chr2 215078113 215078152 -35609702 + MLT1C LTR MaLR 1 40 -584 652 288 149 21 chr2 215078325 215079334 -35608520 + L1ME3A LINE L1 4507 5657 -513 234 0 0 0 chr2 215079389 215079415 -35608439 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 317 315 91 24 chr2 215079419 215079584 -35608270 + L1ME3A LINE L1 5700 5875 -295 2871 9 0 3 chr2 215079584 215079902 -35607952 - AluYb8 SINE Alu -1 317 1 1518 199 107 8 chr2 215080939 215081330 -35606524 + MLT1C LTR MaLR 38 467 0 765 217 30 10 chr2 215081344 215081553 -35606301 - MLT1E1 LTR MaLR -60 594 317 844 198 24 0 chr2 215081585 215081752 -35606102 - MLT1E1 LTR MaLR -427 227 57 995 136 181 0 chr2 215082109 215082308 -35605546 - MER46A DNA MER2_type 0 236 2 26 64 0 0 chr2 215082308 215082355 -35605499 + AT_rich Low_complexity Low_complexity 1 47 0 283 176 0 29 chr2 215082607 215082675 -35605179 - MLT2C1 LTR ERVL 0 520 455 222 37 0 0 chr2 215082718 215082745 -35605109 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 1710 126 62 34 chr2 215082747 215083072 -35604782 - MLT2C1 LTR ERVL -51 346 13 227 202 12 0 chr2 215083285 215083369 -35604485 + (TA)n Simple_repeat Simple_repeat 2 86 0 1730 197 24 36 chr2 215083505 215083922 -35603932 + LTR52 LTR ERVL 1 412 -9 5690 179 8 6 chr2 215084328 215085324 -35602530 + L1PA15-16 LINE L1 2 999 -5850 455 194 19 19 chr2 215085327 215085430 -35602424 + LTR52 LTR ERVL 255 357 -64 * 689 180 31 0 chr2 215085423 215085551 -35602303 - MLT2C1 LTR ERVL -157 240 109 22 35 0 0 chr2 215085986 215086015 -35601839 + AT_rich Low_complexity Low_complexity 1 29 0 2237 102 13 0 chr2 215086214 215086518 -35601336 - AluSp SINE Alu -3 310 3 230 202 32 0 chr2 215087001 215087095 -35600759 - L1M LINE L1 -804 5360 5264 2624 220 24 40 chr2 215087147 215087819 -35600035 + MER67B LTR ERV1 1 661 0 3188 148 5 30 chr2 215087867 215088468 -35599386 + LTR60 LTR ERV1 1 586 0 38 93 0 0 chr2 215089592 215089700 -35598154 + AT_rich Low_complexity Low_complexity 1 108 0 4818 154 30 7 chr2 215089708 215090553 -35597301 + MER6 DNA MER2_type 2 865 0 25 0 0 0 chr2 215090598 215090623 -35597231 + AT_rich Low_complexity Low_complexity 1 25 0 1916 150 62 31 chr2 215090857 215091210 -35596644 - THE1B LTR MaLR 0 364 1 263 188 0 0 chr2 215091239 215091287 -35596567 + L1MC4a LINE L1 6540 6587 -1221 1799 146 73 20 chr2 215091425 215091781 -35596073 - THE1C LTR MaLR 0 375 1 8974 157 9 35 chr2 215091781 215093401 -35594453 - THE1C-int LTR MaLR 0 1580 3 1780 170 43 32 chr2 215093403 215093774 -35594080 - THE1C LTR MaLR 0 375 1 1967 210 148 43 chr2 215093806 215094588 -35593266 + L1MC5 LINE L1 6726 7589 -372 6828 125 20 19 chr2 215094953 215096356 -35591498 + L1MA2 LINE L1 4899 6304 0 24 0 0 0 chr2 215096356 215096380 -35591474 + AT_rich Low_complexity Low_complexity 1 24 0 2143 66 52 7 chr2 215096389 215096676 -35591178 + AluY SINE Alu 1 300 -11 4658 211 47 30 chr2 215097654 215098079 -35589775 + L1MC4a LINE L1 6500 6916 -892 3430 138 2 11 chr2 215098079 215098610 -35589244 - MER1A DNA MER1_type -1 526 1 4658 211 47 30 chr2 215098610 215099028 -35588826 + L1MC4a LINE L1 6916 7325 -483 2721 164 4 17 chr2 215099028 215099497 -35588357 + MLT1C LTR MaLR 5 467 0 4658 211 47 30 chr2 215099497 215100021 -35587833 + L1MC4a LINE L1 7325 7808 0 225 0 0 0 chr2 215100690 215100715 -35587139 + (T)n Simple_repeat Simple_repeat 1 25 0 1624 241 107 29 chr2 215101110 215101691 -35586163 + MLT1E LTR MaLR 1 589 -4 274 153 51 17 chr2 215102390 215102449 -35585405 + L1ME4a LINE L1 5964 6024 -97 29 28 0 0 chr2 215102535 215102571 -35585283 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr2 215103222 215103247 -35584607 + AT_rich Low_complexity Low_complexity 1 25 0 13850 173 13 22 chr2 215103276 215105745 -35582109 - L1PB1 LINE L1 0 6151 3661 2420 76 0 0 chr2 215105745 215106049 -35581805 - AluY SINE Alu -7 304 1 13850 173 13 22 chr2 215106049 215107164 -35580690 - L1PB1 LINE L1 -2490 3661 2537 2191 113 3 7 chr2 215107164 215107474 -35580380 - AluSg SINE Alu -1 309 1 13850 173 13 22 chr2 215107474 215107699 -35580155 - L1PB1 LINE L1 -3614 2537 2374 2071 128 39 33 chr2 215107699 215108058 -35579796 + THE1B LTR MaLR 1 361 -3 13850 173 13 22 chr2 215108058 215108189 -35579665 - L1PB1 LINE L1 -3777 2374 2243 584 246 113 36 chr2 215108194 215108503 -35579351 - LTR15 LTR ERV1 -5 488 156 12076 118 63 49 chr2 215108698 215109482 -35578372 - L1PBa LINE L1 -3901 2962 2191 1929 140 0 10 chr2 215109482 215109782 -35578072 - AluSx SINE Alu -15 297 1 12076 118 63 49 chr2 215109782 215111233 -35576621 - L1PBa LINE L1 -4672 2191 694 255 61 0 0 chr2 215112398 215112431 -35575423 + (TG)n Simple_repeat Simple_repeat 1 33 0 261 391 18 0 chr2 215113213 215113309 -35574545 + MIR SINE MIR 8 115 -93 363 209 43 139 chr2 215113567 215113797 -35574057 - L1MEc LINE L1 -4342 2054 1847 387 0 0 0 chr2 215113846 215113889 -35573965 + (TA)n Simple_repeat Simple_repeat 2 44 0 311 301 73 32 chr2 215113914 215114283 -35573571 - L1MEc LINE L1 -5045 1351 968 732 267 52 21 chr2 215114287 215114575 -35573279 - L1ME1 LINE L1 -107 5993 5697 * 4126 96 19 0 chr2 215114565 215115141 -35572713 - L1PA11 LINE L1 0 6174 5588 739 230 22 104 chr2 215115146 215115502 -35572352 - L1ME1 LINE L1 -1404 4676 4350 1944 86 11 0 chr2 215115509 215115789 -35572065 - L1MA2 LINE L1 0 6304 6022 802 293 88 20 chr2 215115791 215116088 -35571766 - L1ME1 LINE L1 -5442 628 312 21 0 0 0 chr2 215116948 215116969 -35570885 + AT_rich Low_complexity Low_complexity 1 21 0 308 327 20 10 chr2 215117734 215117835 -35570019 - MIR3 SINE MIR -39 169 68 323 360 0 9 chr2 215118023 215118137 -35569717 + MIR SINE MIR 19 131 -131 23 33 0 0 chr2 215118163 215118193 -35569661 + AT_rich Low_complexity Low_complexity 1 30 0 418 267 11 88 chr2 215122819 215123053 -35564801 - MLT1H LTR MaLR -101 308 98 2375 155 31 12 chr2 215123797 215124217 -35563637 + MSTA LTR MaLR 1 428 0 517 256 156 6 chr2 215124500 215124660 -35563194 - MER5A DNA MER1_type -2 187 4 1163 243 158 42 chr2 215125041 215125515 -35562339 + MLT1H LTR MaLR 21 549 0 5204 186 26 4 chr2 215125699 215127237 -35560617 - L1PA16 LINE L1 -9 6157 4594 214 273 208 0 chr2 215128006 215128083 -35559771 - L2 LINE L2 -1 3312 3220 2519 137 48 17 chr2 215128146 215128622 -35559232 + L1MB2 LINE L1 5679 6169 -2 225 143 0 0 chr2 215129314 215129356 -35558498 + LTR66 LTR ERVL 398 439 -171 302 292 22 22 chr2 215129358 215129447 -35558407 + L1MC4 LINE L1 6614 6702 -1340 352 153 0 0 chr2 215129466 215129525 -35558329 + L1P LINE L1 5133 5191 -955 234 311 0 0 chr2 215129577 215129667 -35558187 + L1MC4 LINE L1 6614 6703 -1339 315 296 23 0 chr2 215129681 215129769 -35558085 + L1MC4 LINE L1 6614 6703 -1339 708 240 0 0 chr2 215129773 215129952 -35557902 + (TA)n Simple_repeat Simple_repeat 2 180 0 513 257 0 0 chr2 215129969 215130121 -35557733 + (TA)n Simple_repeat Simple_repeat 2 153 0 259 277 89 18 chr2 215130284 215130396 -35557458 - MLT1K LTR MaLR -1 587 468 22 0 0 0 chr2 215130409 215130431 -35557423 + AT_rich Low_complexity Low_complexity 1 22 0 1622 151 7 14 chr2 215130431 215130715 -35557139 - AluSg SINE Alu -9 301 20 274 233 10 39 chr2 215230847 215230950 -35456904 + CT-rich Low_complexity Low_complexity 2 101 0 6999 212 30 2 chr2 215231195 215232945 -35454909 + L1PB1 LINE L1 2232 4031 -2115 747 154 112 12 chr2 215232948 215233117 -35454737 + LTR22 LTR ERVK 5 190 -319 1360 102 93 0 chr2 215233596 215233832 -35454022 - L1MA1 LINE L1 0 6302 6045 2187 123 13 0 chr2 215234076 215234384 -35453470 - AluSx SINE Alu 0 312 1 21 82 0 0 chr2 215234418 215234467 -35453387 + AT_rich Low_complexity Low_complexity 1 49 0 30 45 0 0 chr2 215234722 215234766 -35453088 + AT_rich Low_complexity Low_complexity 1 44 0 1582 209 111 38 chr2 215235146 215235678 -35452176 - MER11A LTR ERVK 0 1266 696 32 111 0 0 chr2 215235745 215235889 -35451965 + GC_rich Low_complexity Low_complexity 1 144 0 1972 62 0 14 chr2 215236008 215236297 -35451557 + HERVH LTR ERV1 7429 7713 0 3411 64 2 7 chr2 215236297 215236747 -35451107 + LTR7 LTR ERV1 1 448 -2 7814 93 20 28 chr2 215236749 215238034 -35449820 + HERVH LTR ERV1 1 1275 -6438 23 0 0 0 chr2 215238754 215238777 -35449077 + AT_rich Low_complexity Low_complexity 1 23 0 793 175 8 0 chr2 215238869 215238989 -35448865 - 5S rRNA rRNA 0 121 1 22 0 0 0 chr2 215239563 215239585 -35448269 + AT_rich Low_complexity Low_complexity 1 22 0 5034 120 23 11 chr2 215239585 215240859 -35446995 - L1PA16 LINE L1 -7 6159 4842 5521 185 14 15 chr2 215241002 215242683 -35445171 + L1PB1 LINE L1 4012 5687 -464 261 0 0 0 chr2 215242690 215242719 -35445135 + (CA)n Simple_repeat Simple_repeat 2 30 0 2560 106 0 0 chr2 215242724 215243082 -35444772 + L1PB1 LINE L1 5793 6150 -1 3471 155 37 78 chr2 215243813 215244360 -35443494 - L1MC3 LINE L1 -175 7610 7042 180 77 0 0 chr2 215244360 215244386 -35443468 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 3471 155 37 78 chr2 215244386 215244636 -35443218 - L1MC3 LINE L1 -743 7042 6854 504 117 0 0 chr2 215244636 215244713 -35443141 + (TG)n Simple_repeat Simple_repeat 2 78 0 3471 155 37 78 chr2 215244713 215244837 -35443017 - L1MC3 LINE L1 -931 6854 6726 1880 72 4 4 chr2 215244838 215245100 -35442754 + THE1C-int LTR MaLR 1311 1572 -8 1201 143 0 0 chr2 215245108 215245297 -35442557 + THE1C LTR MaLR 1 189 -186 210 139 0 28 chr2 215245440 215245476 -35442378 + (TG)n Simple_repeat Simple_repeat 2 36 0 26 0 0 0 chr2 215246471 215246497 -35441357 + AT_rich Low_complexity Low_complexity 1 26 0 13718 101 12 6 chr2 215247280 215250082 -35437772 - L1PA7 LINE L1 -11 6143 3316 380 320 164 11 chr2 215251437 215251790 -35436064 - MLT1H LTR MaLR -118 431 25 325 356 62 7 chr2 215251976 215252122 -35435732 + MIR SINE MIR 70 223 -39 378 0 0 0 chr2 215252286 215252328 -35435526 + (TA)n Simple_repeat Simple_repeat 2 43 0 4153 123 23 24 chr2 215252802 215253520 -35434334 + MER11B LTR ERVK 1 886 -380 24 32 0 0 chr2 215253929 215253960 -35433894 + AT_rich Low_complexity Low_complexity 1 31 0 5678 122 7 16 chr2 215253961 215254879 -35432975 - L1MA2 LINE L1 -2 6302 5394 763 146 15 0 chr2 215254892 215255022 -35432832 + L1PA16 LINE L1 6026 6157 -9 323 122 0 0 chr2 215255063 215255112 -35432742 - L1M1 LINE L1 -707 5597 5549 948 290 94 33 chr2 215256160 215256720 -35431134 + MLT1G1 LTR MaLR 5 585 -5 565 288 109 0 chr2 215256725 215257027 -35430827 - Charlie2 DNA MER1_type -32 2830 2496 231 225 109 29 chr2 215257937 215258075 -35429779 - L1ME4a LINE L1 -157 5964 5816 777 293 53 44 chr2 215258425 215258837 -35429017 + MLT1J LTR MaLR 62 477 -34 1813 156 31 98 chr2 215258837 215259255 -35428599 - MLT1B LTR MaLR 0 390 1 36 0 0 0 chr2 215259608 215259644 -35428210 + AT_rich Low_complexity Low_complexity 1 36 0 239 365 0 0 chr2 215260843 215260928 -35426926 - MLT1K LTR MaLR -324 264 180 260 244 44 33 chr2 215261548 215261638 -35426216 + MER103 DNA DNA 56 146 -20 22 0 0 0 chr2 215262230 215262252 -35425602 + AT_rich Low_complexity Low_complexity 1 22 0 759 280 78 45 chr2 215263100 215263497 -35424357 + MLT1J LTR MaLR 71 480 -31 902 28 0 0 chr2 215264912 215265018 -35422836 - L1PA4 LINE L1 -8 6147 6042 318 50 0 0 chr2 215266154 215266194 -35421660 + (CA)n Simple_repeat Simple_repeat 1 40 0 28 29 0 0 chr2 215266330 215266365 -35421489 + AT_rich Low_complexity Low_complexity 1 35 0 300 269 102 0 chr2 215268014 215268122 -35419732 + MIR SINE MIR 130 248 -14 370 211 128 54 chr2 215268436 215268640 -35419214 + MER46C DNA MER2_type 116 334 -4 409 221 96 10 chr2 215268673 215268777 -35419077 - MER94 DNA DNA -20 114 2 579 311 29 19 chr2 215268874 215269080 -35418774 + MER20B DNA MER1_type 5 212 -571 21 57 0 0 chr2 215269782 215269817 -35418037 + AT_rich Low_complexity Low_complexity 1 35 0 1956 118 11 4 chr2 215269928 215270238 -35417616 + AluSq SINE Alu 2 313 0 240 292 78 32 chr2 215270776 215270930 -35416924 + MARNA DNA Mariner 262 422 -164 356 261 5 33 chr2 215272365 215272549 -35415305 + C-rich Low_complexity Low_complexity 2 180 0 228 321 0 0 chr2 215272600 215272731 -35415123 + C-rich Low_complexity Low_complexity 1 131 0 2846 162 2 18 chr2 215273083 215273577 -35414277 - MER66B LTR ERV1 0 486 1 21 36 0 0 chr2 215274553 215274581 -35413273 + AT_rich Low_complexity Low_complexity 1 28 0 1793 199 22 11 chr2 215274889 215275250 -35412604 + MLT1A1 LTR MaLR 1 365 0 201 200 0 0 chr2 215275642 215275677 -35412177 - MIR SINE MIR -116 146 112 1047 179 21 0 chr2 215275787 215275977 -35411877 + L1PA16 LINE L1 5968 6161 -5 265 277 193 0 chr2 215276104 215276187 -35411667 - MIR SINE MIR -116 146 48 2442 171 38 20 chr2 215277359 215277877 -35409977 - LTR27 LTR ERV1 -11 493 3 1653 121 61 8 chr2 215277878 215278142 -35409712 - LTR27-int LTR ERV1 0 5217 4940 2128 129 40 3 chr2 215278146 215278472 -35409382 - LTR27-int LTR ERV1 -1275 3942 3605 4966 135 22 0 chr2 215278472 215279249 -35408605 - MER61D-int LTR ERV1 -840 5106 4313 3852 232 71 58 chr2 215279227 215280528 -35407326 - MER61D-int LTR ERV1 -379 4838 387 * 508 249 113 65 chr2 215280495 215280724 -35407130 - MER61D-int LTR ERV1 -6717 279 40 * 794 193 42 8 chr2 215280742 215280949 -35406905 - MER61D LTR ERV1 -11 493 323 1003 89 7 0 chr2 215280949 215281084 -35406770 - AluYa5 SINE Alu -11 300 165 2173 122 3 9 chr2 215281085 215281414 -35406440 - LTR27 LTR ERV1 -305 331 5 280 212 129 0 chr2 215281737 215281822 -35406032 + L1MC5 LINE L1 5372 5467 -2341 719 211 82 101 chr2 215281870 215282338 -35405516 + L1MC5 LINE L1 6732 7164 -797 526 235 45 83 chr2 215282556 215282646 -35405208 + L1MC5 LINE L1 7257 7349 -612 750 214 40 10 chr2 215282646 215282847 -35405007 + MER3 DNA MER1_type 2 208 -1 526 235 45 83 chr2 215282847 215283028 -35404826 + L1MC5 LINE L1 7349 7515 -446 2239 209 28 24 chr2 215283028 215283531 -35404323 + MLT1D LTR MaLR 1 505 0 526 235 45 83 chr2 215283531 215283594 -35404260 + L1MC5 LINE L1 7515 7579 -382 1596 147 107 7 chr2 215284452 215284751 -35403103 - MER51B LTR ERV1 0 377 49 522 139 141 14 chr2 215284751 215284859 -35402995 - MER51A LTR ERV1 -257 120 1 1723 77 27 4 chr2 215284979 215285239 -35402615 + L1MA5 LINE L1 6032 6297 -3 1887 150 0 0 chr2 215285316 215285589 -35402265 - AluSx SINE Alu -37 275 3 721 253 75 23 chr2 215285603 215285911 -35401943 + L1MC5 LINE L1 7336 7659 -302 8823 113 4 15 chr2 215285914 215287212 -35400642 - HSMAR1 DNA Mariner 0 1287 4 224 241 0 0 chr2 215287244 215287298 -35400556 + (TA)n Simple_repeat Simple_repeat 1 54 0 191 298 53 86 chr2 215287937 215288088 -35399766 - L2 LINE L2 0 3272 3127 204 40 0 0 chr2 215288618 215288643 -35399211 + (TG)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr2 215289018 215289041 -35398813 + AT_rich Low_complexity Low_complexity 1 23 0 6389 214 92 52 chr2 215290706 215293632 -35394222 - L1PA15-16 LINE L1 -1986 4863 1949 1600 240 14 6 chr2 215293635 215293985 -35393869 + MLT1A1 LTR MaLR 13 365 0 775 172 8 0 chr2 215293985 215294119 -35393735 + L1MB1 LINE L1 5794 5928 -240 756 208 140 44 chr2 215294117 215294367 -35393487 + L1ME LINE L1 5478 5751 -415 * 1979 134 14 0 chr2 215294657 215294949 -35392905 - AluSx SINE Alu -16 296 1 28 29 0 0 chr2 215295541 215295576 -35392278 + AT_rich Low_complexity Low_complexity 1 35 0 1257 223 95 3 chr2 215296061 215296366 -35391488 + MLT1E1 LTR MaLR 1 333 -321 753 160 8 0 chr2 215296385 215296504 -35391350 + FLAM_A SINE Alu 1 120 -13 1106 284 27 0 chr2 215296602 215296898 -35390956 + MLT1E LTR MaLR 266 569 -24 405 293 9 9 chr2 215296932 215297038 -35390816 + HERV16 LTR ERVL 2955 3060 -1936 1350 318 60 29 chr2 215297054 215297784 -35390070 + HERV16 LTR ERVL 3606 4358 -1406 709 232 51 34 chr2 215300921 215301098 -35386756 + MIR SINE MIR 68 247 -15 1077 214 4 16 chr2 215301945 215302188 -35385666 + MLT1A2 LTR MaLR 135 374 0 1990 103 6 55 chr2 215302818 215303129 -35384725 + AluSx SINE Alu 1 296 -16 342 236 76 44 chr2 215303170 215303348 -35384506 - MLT1I LTR MaLR -240 309 87 738 291 141 45 chr2 215303356 215303961 -35383893 + LTR50 LTR ERVL 16 678 -117 595 294 48 29 chr2 215304089 215304361 -35383493 + HERV16 LTR ERVL 5059 5335 -150 864 189 0 0 chr2 215304572 215304720 -35383134 + MLT1A1 LTR MaLR 218 365 0 429 155 134 0 chr2 215305922 215306019 -35381835 - L1M4 LINE L1 -2964 3182 3073 401 314 144 5 chr2 215308647 215308841 -35379013 + MIR SINE MIR 3 223 -39 21 36 0 0 chr2 215309969 215309997 -35377857 + AT_rich Low_complexity Low_complexity 1 28 0 2071 96 40 13 chr2 215310572 215310874 -35376980 - AluY SINE Alu -1 310 1 22 35 0 0 chr2 215311321 215311350 -35376504 + AT_rich Low_complexity Low_complexity 1 29 0 14291 117 59 12 chr2 215311367 215312295 -35375559 - LOR1-int LTR ERV1 -5123 2997 2114 210 37 0 0 chr2 215312295 215312322 -35375532 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 14291 117 59 12 chr2 215312322 215314388 -35373466 - LOR1-int LTR ERV1 -6006 2114 1 2174 182 17 27 chr2 215314396 215314617 -35373237 - LOR1b LTR ERV1 -8 453 231 1810 160 52 19 chr2 215314617 215314980 -35372874 + THE1C LTR MaLR 1 375 0 2174 182 17 27 chr2 215314980 215315120 -35372734 - LOR1b LTR ERV1 -230 231 93 2135 109 0 0 chr2 215315120 215315416 -35372438 - AluSg SINE Alu 0 304 9 2174 182 17 27 chr2 215315416 215315459 -35372395 - LOR1b LTR ERV1 -368 93 51 5279 135 52 26 chr2 215315503 215316854 -35371000 - LOR1a-int LTR ERV1 -5581 2235 1283 17846 196 41 6 chr2 215316864 215321008 -35366846 + L1PA13 LINE L1 1474 5735 -1062 3011 102 4 25 chr2 215321113 215321593 -35366261 + L1PA13 LINE L1 6345 6814 0 3033 147 65 87 chr2 215321607 215321992 -35365862 - LOR1a-int LTR ERV1 -363 1423 1031 245 213 21 0 chr2 215321992 215322039 -35365815 - 5S rRNA rRNA -71 50 3 3033 147 65 87 chr2 215322039 215322347 -35365507 - LOR1a-int LTR ERV1 -755 1031 200 2062 168 57 0 chr2 215322356 215322707 -35365147 - LOR1a-int LTR ERV1 -7749 371 1 3283 117 16 6 chr2 215322710 215323199 -35364655 - LOR1a LTR ERV1 -3 494 1 221 365 85 34 chr2 215324900 215325346 -35362508 + L2 LINE L2 1837 2374 -940 746 288 0 23 chr2 215325582 215325797 -35362057 - HERVL LTR ERVL -780 4874 4665 679 349 141 33 chr2 215325806 215326718 -35361136 - L2 LINE L2 -379 2935 1925 22 70 0 0 chr2 215328955 215328998 -35358856 + AT_rich Low_complexity Low_complexity 1 43 0 288 176 0 11 chr2 215329555 215329618 -35358236 + MLT1J LTR MaLR 59 156 -332 351 93 0 0 chr2 215329637 215329691 -35358163 - MADE1 DNA Mariner -26 54 1 1620 199 0 7 chr2 215330218 215330509 -35357345 + AluJb SINE Alu 1 289 -23 553 367 37 7 chr2 215330552 215330852 -35357002 - LTR16C LTR ERVL -110 381 73 207 139 0 0 chr2 215331012 215331048 -35356806 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1144 85 13 0 chr2 215331048 215331201 -35356653 + AluYa5 SINE Alu 149 303 -8 180 77 0 0 chr2 215332866 215332892 -35354962 + (TTTC)n Simple_repeat Simple_repeat 4 29 0 2011 151 3 0 chr2 215332904 215333215 -35354639 - AluSx SINE Alu 0 312 1 288 327 31 75 chr2 215334215 215334441 -35353413 + MLT1L LTR MaLR 328 543 -72 321 226 32 73 chr2 215334626 215334750 -35353104 + L1MEc LINE L1 44 162 -6234 2244 161 87 3 chr2 215334767 215335158 -35352696 + MSTB LTR MaLR 1 424 -2 665 248 92 14 chr2 215335170 215335388 -35352466 + L1MEc LINE L1 177 411 -5985 277 349 42 14 chr2 215335768 215335983 -35351871 + L1ME LINE L1 5564 5784 -378 414 0 0 0 chr2 215336220 215336266 -35351588 + (TG)n Simple_repeat Simple_repeat 2 47 0 217 290 16 0 chr2 215336397 215336459 -35351395 + MIR3 SINE MIR 146 208 0 21 0 0 0 chr2 215337609 215337630 -35350224 + AT_rich Low_complexity Low_complexity 1 21 0 192 77 0 0 chr2 215337703 215337729 -35350125 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 1495 211 13 0 chr2 215337945 215338249 -35349605 + AluJb SINE Alu 1 308 -4 21 36 0 0 chr2 215338915 215338943 -35348911 + AT_rich Low_complexity Low_complexity 1 28 0 8084 72 1 2 chr2 215339036 215340339 -35347515 - L1PA7 LINE L1 -570 5584 4283 4541 62 0 0 chr2 215340339 215340899 -35346955 + L1PA7 LINE L1 5581 6146 -8 1770 144 68 0 chr2 215341162 215341425 -35346429 + AluSx SINE Alu 2 282 -30 203 30 0 61 chr2 215341439 215341472 -35346382 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 222 118 0 0 chr2 215341933 215341967 -35345887 + (ATG)n Simple_repeat Simple_repeat 3 36 0 615 322 35 28 chr2 215341968 215342223 -35345631 - MIR SINE MIR -3 259 3 186 43 0 0 chr2 215342315 215342338 -35345516 + (TG)n Simple_repeat Simple_repeat 2 24 0 1289 278 60 36 chr2 215342338 215343166 -35344688 - L1M4 LINE L1 -2422 3724 2877 225 224 17 0 chr2 215343653 215343711 -35344143 + (TA)n Simple_repeat Simple_repeat 1 59 0 1547 201 42 11 chr2 215343844 215344198 -35343656 + MLT1A1 LTR MaLR 1 365 0 608 337 27 18 chr2 215344238 215344275 -35343579 - MLT1K LTR MaLR -2 586 551 2111 78 19 13 chr2 215344275 215344584 -35343270 + AluY SINE Alu 1 311 0 608 337 27 18 chr2 215344584 215344875 -35342979 - MLT1K LTR MaLR -37 551 255 34 0 0 0 chr2 215345258 215345292 -35342562 + AT_rich Low_complexity Low_complexity 1 34 0 1572 260 56 73 chr2 215346247 215346325 -35341529 + L1M4b LINE L1 11 89 -6770 447 35 0 0 chr2 215346325 215346382 -35341472 + (CA)n Simple_repeat Simple_repeat 2 58 0 1572 260 56 73 chr2 215346382 215346837 -35341017 + L1M4b LINE L1 89 535 -6324 1522 250 63 39 chr2 215346834 215347690 -35340164 + L1M4b LINE L1 1507 2382 -4577 * 1142 263 71 36 chr2 215348038 215348826 -35339028 + L1M4b LINE L1 2589 3362 -3595 43 56 0 0 chr2 215349079 215349150 -35338704 + AT_rich Low_complexity Low_complexity 1 71 0 286 261 126 27 chr2 215350647 215350758 -35337096 - MIR SINE MIR -139 123 2 563 185 70 45 chr2 215351025 215351182 -35336672 - MER63 DNA MER1_type -274 788 2 346 225 0 0 chr2 215351237 215351308 -35336546 + MIR SINE MIR 122 192 -70 580 306 9 22 chr2 215351311 215351543 -35336311 - L1MCb LINE L1 -5814 231 3 2011 97 7 4 chr2 215352194 215352472 -35335382 - AluSc SINE Alu -30 279 1 1610 205 44 36 chr2 215354397 215355103 -35332751 - L1MC/D LINE L1 -743 5472 5044 * 1743 171 59 13 chr2 215355095 215355702 -35332152 - L1M2 LINE L1 -658 5654 5024 2425 249 38 17 chr2 215356432 215357071 -35330783 - MER82 DNA MER2_type -1 652 1 189 0 0 0 chr2 215358066 215358087 -35329767 + (A)n Simple_repeat Simple_repeat 1 21 0 673 225 103 61 chr2 215358350 215358721 -35329133 - MLT1C LTR MaLR -4 463 51 1186 242 60 10 chr2 215358756 215359174 -35328680 - L1MC/D LINE L1 -1281 4934 4496 306 340 81 21 chr2 215359231 215359466 -35328388 - L1MC/D LINE L1 -5753 643 395 442 294 98 14 chr2 215359511 215359787 -35328067 - L1MC/D LINE L1 -6074 322 24 2197 116 3 0 chr2 215359790 215360093 -35327761 - AluSp SINE Alu -9 304 1 216 244 209 23 chr2 215361697 215361783 -35326071 + MER5A DNA MER1_type 87 188 -1 21 36 0 0 chr2 215363251 215363279 -35324575 + AT_rich Low_complexity Low_complexity 1 28 0 1601 246 27 40 chr2 215363342 215364032 -35323822 - L1ME1 LINE L1 0 6184 5509 243 326 22 0 chr2 215364049 215364141 -35323713 + GA-rich Low_complexity Low_complexity 2 95 0 244 327 178 9 chr2 215364252 215364359 -35323495 + MIR SINE MIR 17 141 -67 248 320 96 16 chr2 215364484 215364609 -35323245 - L2 LINE L2 -345 2969 2835 962 178 107 0 chr2 215364657 215364854 -35323000 + MIR SINE MIR 21 238 -24 278 241 214 35 chr2 215365745 215365890 -35321964 - MIR SINE MIR 0 262 92 41 21 0 0 chr2 215365971 215366019 -35321835 + AT_rich Low_complexity Low_complexity 1 48 0 699 280 106 7 chr2 215366483 215366765 -35321089 + L1PB3 LINE L1 3 312 -6551 5479 175 31 7 chr2 215366781 215367931 -35319923 + L1PB3 LINE L1 749 1926 -4937 * 12009 184 26 26 chr2 215367919 215371680 -35316174 + L1PB3 LINE L1 3102 6863 -7 262 281 100 18 chr2 215372628 215372825 -35315029 - L1MEc LINE L1 -920 1656 1425 198 304 18 0 chr2 215373689 215373745 -35314109 - L2 LINE L2 -321 2951 2895 2129 8 0 0 chr2 215374016 215374258 -35313596 - L1PA2 LINE L1 -189 5966 5725 585 13 0 0 chr2 215374258 215374333 -35313521 + L1PA2 LINE L1 6081 6155 0 355 254 56 48 chr2 215375899 215375934 -35311920 + L2 LINE L2 2386 2419 -895 3188 148 51 24 chr2 215375934 215376329 -35311525 - LTR26 LTR ERV1 0 603 185 2170 97 7 3 chr2 215376329 215376627 -35311227 - AluSg SINE Alu -11 299 1 3188 148 51 24 chr2 215376627 215376818 -35311036 - LTR26 LTR ERV1 -418 185 1 355 254 56 48 chr2 215376818 215376908 -35310946 + L2 LINE L2 2419 2512 -802 523 303 197 6 chr2 215376976 215377326 -35310528 - L1MC4a LINE L1 -1639 6169 5753 2174 114 0 7 chr2 215378102 215378400 -35309454 + AluSx SINE Alu 1 296 -16 40 0 0 0 chr2 215379730 215379770 -35308084 + AT_rich Low_complexity Low_complexity 1 40 0 2056 97 3 49 chr2 215380547 215380855 -35306999 - AluSx SINE Alu -18 294 1 277 196 78 111 chr2 215380870 215381023 -35306831 - L1MD3 LINE L1 -15 7980 7833 3049 231 52 30 chr2 215381027 215381287 -35306567 - L1MD2 LINE L1 -218 6535 6282 1974 177 15 47 chr2 215381287 215381688 -35306166 + MLT1B LTR MaLR 3 390 0 3049 231 52 30 chr2 215381688 215382425 -35305429 - L1MD2 LINE L1 -471 6282 5506 2663 255 131 43 chr2 215382408 215383053 -35304801 - L1MD2 LINE L1 -5443 1097 510 * 2669 149 2 36 chr2 215383053 215383320 -35304534 + L1MA4A LINE L1 5818 6062 -241 1809 143 3 55 chr2 215383320 215383648 -35304206 + AluJb SINE Alu 1 311 -1 2669 149 2 36 chr2 215383648 215383876 -35303978 + L1MA4A LINE L1 6062 6296 -7 2663 255 131 43 chr2 215383876 215384167 -35303687 - L1MD2 LINE L1 -6030 510 67 572 212 8 0 chr2 215384167 215384299 -35303555 + L1PB4 LINE L1 6021 6153 -3 2663 255 131 43 chr2 215384299 215384350 -35303504 - L1MD2 LINE L1 -6473 67 22 23 0 0 0 chr2 215384528 215384551 -35303303 + AT_rich Low_complexity Low_complexity 1 23 0 202 367 78 6 chr2 215385025 215385205 -35302649 + MIR SINE MIR 15 207 -55 28 95 0 0 chr2 215385416 215385500 -35302354 + AT_rich Low_complexity Low_complexity 1 84 0 196 344 172 26 chr2 215385500 215385651 -35302203 - MIR SINE MIR -15 247 75 236 167 0 19 chr2 215385654 215385708 -35302146 + GA-rich Low_complexity Low_complexity 2 54 0 408 284 150 0 chr2 215385711 215385838 -35302016 - L2 LINE L2 -18 3295 3150 259 313 62 0 chr2 215387158 215387302 -35300552 - L1ME4a LINE L1 -42 6079 5927 256 338 0 0 chr2 215389512 215389586 -35298268 - MER119 DNA MER1_type -7 576 503 * 399 241 25 0 chr2 215389582 215389661 -35298193 - MER119 DNA MER1_type -500 83 3 266 285 285 30 chr2 215389735 215389935 -35297919 + MER69B DNA AcHobo 20 270 -956 999 239 160 18 chr2 215389940 215390394 -35297460 + MER69B DNA AcHobo 506 1078 -1448 1232 167 211 0 chr2 215390394 215390640 -35297214 - AluJb SINE Alu -4 298 1 999 239 160 18 chr2 215390640 215390813 -35297041 + MER69B DNA AcHobo 1078 1225 -1 1906 145 11 26 chr2 215391097 215391449 -35296405 + L1MA7 LINE L1 5683 6029 -262 428 95 0 0 chr2 215391465 215391528 -35296326 - L1PA5 LINE L1 -5 6149 6087 2043 81 4 1 chr2 215391528 215391824 -35296030 + L1MC/D LINE L1 5496 5796 -418 410 280 166 6 chr2 215392195 215392352 -35295502 - MIR SINE MIR -71 191 10 202 93 23 23 chr2 215392772 215392815 -35295039 + (CA)n Simple_repeat Simple_repeat 2 44 0 29 28 0 0 chr2 215392944 215392980 -35294874 + AT_rich Low_complexity Low_complexity 1 36 0 3387 64 2 7 chr2 215392990 215393440 -35294414 + LTR7 LTR ERV1 1 448 -2 19138 105 14 40 chr2 215393442 215396515 -35291339 + HERVH LTR ERV1 1 2995 -4718 879 136 27 0 chr2 215396494 215396641 -35291213 + HERVH LTR ERV1 3140 3290 -4423 * 8628 100 3 7 chr2 215396631 215398357 -35289497 + HERVH LTR ERV1 3492 5273 -1818 1388 125 19 0 chr2 215398358 215398574 -35289280 + HERVH LTR ERV1 5600 5819 -1894 * 2577 79 39 11 chr2 215398572 215398953 -35288901 + HERVH LTR ERV1 7322 7713 0 3436 56 7 7 chr2 215398953 215399401 -35288453 + LTR7 LTR ERV1 1 448 -2 1347 195 7 33 chr2 215399993 215400295 -35287559 - L1MB3 LINE L1 -32 6151 5858 593 204 28 11 chr2 215400650 215400826 -35287028 + LTR7 LTR ERV1 272 450 0 1347 195 7 33 chr2 215401416 215401718 -35286136 - L1MB3 LINE L1 -32 6151 5858 26 74 0 0 chr2 215402331 215402385 -35285469 + AT_rich Low_complexity Low_complexity 1 54 0 269 348 27 0 chr2 215403561 215403673 -35284181 - MLT2E LTR ERVL -478 150 36 25 0 0 0 chr2 215403872 215403897 -35283957 + AT_rich Low_complexity Low_complexity 1 25 0 1600 91 0 56 chr2 215404443 215404675 -35283179 - AluSg/x SINE Alu -8 302 84 481 372 18 0 chr2 215404853 215405071 -35282783 + MIR SINE MIR 1 222 -40 442 335 0 0 chr2 215405374 215405556 -35282298 + L1MC4a LINE L1 5761 5942 -1866 315 0 0 0 chr2 215405557 215405592 -35282262 + (TG)n Simple_repeat Simple_repeat 2 36 0 250 319 25 0 chr2 215405680 215405799 -35282055 + (TA)n Simple_repeat Simple_repeat 1 122 0 184 175 100 0 chr2 215406140 215406180 -35281674 + L2 LINE L2 3266 3309 -4 1662 84 4 0 chr2 215408049 215408275 -35279579 - L1PB1 LINE L1 -2 6149 5923 1234 114 57 24 chr2 215408281 215408354 -35279500 + L1PB1 LINE L1 5709 5778 -373 270 81 0 0 chr2 215408354 215408391 -35279463 + (TA)n Simple_repeat Simple_repeat 1 37 0 1234 114 57 24 chr2 215408391 215408528 -35279326 + L1PB1 LINE L1 5778 5926 -225 * 8194 135 48 12 chr2 215408525 215408997 -35278857 - L1PBa LINE L1 -3226 3636 3182 482 91 26 13 chr2 215408997 215409074 -35278780 + MADE1 DNA Mariner 3 80 0 8194 135 48 12 chr2 215409074 215410905 -35276949 - L1PBa LINE L1 -3680 3182 620 941 203 10 5 chr2 215410886 215411083 -35276771 - L1PBa LINE L1 -6663 200 3 * 209 116 0 23 chr2 215412196 215412239 -35275615 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 4003 122 31 12 chr2 215412440 215413086 -35274768 - L1PA13 LINE L1 -4 6159 5502 1972 207 16 5 chr2 215413089 215413529 -35274325 + LTR1B LTR ERV1 1 445 -381 336 364 0 0 chr2 215413553 215413729 -35274125 + C-rich Low_complexity Low_complexity 1 176 0 871 173 44 44 chr2 215413947 215414172 -35273682 - L1PBa LINE L1 -6002 861 637 682 210 65 0 chr2 215414174 215414360 -35273494 - L1PBa LINE L1 -6663 200 3 209 116 0 23 chr2 215415473 215415516 -35272338 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 4149 120 30 18 chr2 215415717 215416365 -35271489 - L1PA13 LINE L1 -4 6159 5501 4480 161 35 9 chr2 215416365 215417095 -35270759 + LTR1B LTR ERV1 1 755 -71 180 0 0 0 chr2 215417095 215417115 -35270739 + (CAG)n Simple_repeat Simple_repeat 2 21 0 4480 161 35 9 chr2 215417115 215417189 -35270665 + LTR1B LTR ERV1 755 826 0 4149 120 30 18 chr2 215417189 215417217 -35270637 - L1PA13 LINE L1 -662 5501 5475 1752 172 18 0 chr2 215417217 215417549 -35270305 - L1P LINE L1 -2163 3983 3646 1590 242 51 93 chr2 215418193 215418934 -35268920 + L1MCb LINE L1 29 738 -5307 2151 165 42 31 chr2 215418947 215419486 -35268368 - MLT2A2 LTR ERVL -1 553 1 10387 205 34 39 chr2 215419486 215419844 -35268010 + L1MC3 LINE L1 5075 5433 -2352 1683 174 10 16 chr2 215419844 215420154 -35267700 + AluJb SINE Alu 1 308 -4 10387 205 34 39 chr2 215420154 215421637 -35266217 + L1MC3 LINE L1 5433 6921 -864 225 65 0 0 chr2 215421637 215421668 -35266186 + (CA)n Simple_repeat Simple_repeat 2 32 0 10387 205 34 39 chr2 215421668 215421823 -35266031 + L1MC3 LINE L1 6921 7075 -710 216 67 0 0 chr2 215421823 215421853 -35266001 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 10387 205 34 39 chr2 215421853 215422562 -35265292 + L1MC3 LINE L1 7075 7770 -15 250 289 0 29 chr2 215423200 215423304 -35264550 + GA-rich Low_complexity Low_complexity 4 104 0 6125 138 17 4 chr2 215423520 215425045 -35262809 + L1PB1 LINE L1 4568 6108 -43 30 83 0 0 chr2 215425045 215425117 -35262737 + AT_rich Low_complexity Low_complexity 1 72 0 11815 166 83 13 chr2 215425117 215429468 -35258386 + L1MA3 LINE L1 3041 7724 0 1343 122 47 16 chr2 215429475 215429729 -35258125 + L1MA4 LINE L1 6039 6300 0 2061 106 53 0 chr2 215429930 215430252 -35257602 + L1MA2 LINE L1 5962 6300 -4 306 73 0 0 chr2 215430568 215430609 -35257245 + (TG)n Simple_repeat Simple_repeat 2 42 0 388 353 43 25 chr2 215432743 215433021 -35254833 - L2 LINE L2 -431 2883 2601 492 283 36 16 chr2 215437211 215437383 -35250471 - MIR SINE MIR -62 146 8 335 262 74 16 chr2 215438610 215438732 -35249122 - L1ME4a LINE L1 -2 6119 5991 2116 113 0 0 chr2 215438808 215439117 -35248737 - AluSx SINE Alu 0 309 1 375 223 43 21 chr2 215439826 215439920 -35247934 - MER5B DNA MER1_type 0 178 83 651 210 39 0 chr2 215440195 215440364 -35247490 + MSTC LTR MaLR 1 175 -221 1718 157 26 7 chr2 215440527 215440833 -35247021 - MLT2A1 LTR ERVL -125 319 8 562 342 79 32 chr2 215441514 215441920 -35245934 - LTR16B LTR ERVL -39 425 1 367 314 68 0 chr2 215442247 215442365 -35245489 + MIR3 SINE MIR 58 183 -25 5170 158 29 14 chr2 215444828 215446537 -35241317 - L1MA8 LINE L1 -70 6221 4490 381 205 96 0 chr2 215446586 215446669 -35241185 - MER58A DNA MER1_type 0 139 49 29542 40 32 2 chr2 215447480 215451767 -35236087 + L1P LINE L1 1 4418 -1728 213 121 0 0 chr2 215453550 215453583 -35234271 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 366 245 13 0 chr2 215454608 215454698 -35233156 + MLT1A1 LTR MaLR 225 315 -59 4653 168 56 20 chr2 215454735 215456057 -35231797 - L1MA8 LINE L1 -22 6269 4897 186 43 0 0 chr2 215456580 215456603 -35231251 + (CAATT)n Simple_repeat Simple_repeat 2 24 0 1965 246 27 20 chr2 215456981 215457533 -35230321 + L1ME1 LINE L1 5582 6137 -29 24 0 0 0 chr2 215457539 215457563 -35230291 + AT_rich Low_complexity Low_complexity 1 24 0 2176 126 0 0 chr2 215457584 215457886 -35229968 + AluSx SINE Alu 1 302 -10 288 286 80 43 chr2 215457932 215458233 -35229621 + L1ME LINE L1 5259 5570 -594 227 181 69 69 chr2 215458366 215458438 -35229416 + MER112 DNA MER1_type 1 72 -188 531 258 97 32 chr2 215458560 215458746 -35229108 + MLT1L LTR MaLR 327 524 -91 2181 66 0 11 chr2 215458775 215459062 -35228792 + L1PA7 LINE L1 5867 6150 -4 25 51 0 0 chr2 215459406 215459445 -35228409 + AT_rich Low_complexity Low_complexity 1 39 0 1250 174 66 7 chr2 215460741 215461029 -35226825 - L1MB1 LINE L1 0 6168 5864 1574 259 27 11 chr2 215461033 215461554 -35226300 - L1M4 LINE L1 -3452 2694 2166 184 337 3 131 chr2 215462101 215462383 -35225471 + L2 LINE L2 3009 3254 -18 215 295 192 13 chr2 215462396 215462552 -35225302 - MIR SINE MIR -18 244 61 1004 197 12 79 chr2 215462941 215463195 -35224659 - MSTB1 LTR MaLR -195 237 1 662 181 16 0 chr2 215463195 215463322 -35224532 - L1MB1 LINE L1 -995 5151 5023 1603 146 20 30 chr2 215463347 215463649 -35224205 + L1MB1 LINE L1 5887 6185 -4 189 245 0 0 chr2 215465149 215465198 -35222656 + GA-rich Low_complexity Low_complexity 2 50 0 434 309 0 29 chr2 215465309 215465448 -35222406 + L2 LINE L2 2954 3088 -225 25 31 0 0 chr2 215466057 215466089 -35221765 + AT_rich Low_complexity Low_complexity 1 32 0 3926 68 4 11 chr2 215467198 215467724 -35220130 + L1PA10 LINE L1 5601 6122 -46 9103 230 43 10 chr2 215467727 215468239 -35219615 + L1MB3 LINE L1 2400 2893 -3290 1485 179 136 17 chr2 215468239 215468591 -35219263 + MSTD LTR MaLR 3 396 0 9103 230 43 10 chr2 215468591 215471730 -35216124 + L1MB3 LINE L1 2893 6176 -7 665 295 16 5 chr2 215471814 215472004 -35215850 + MIR SINE MIR 15 206 -56 245 259 0 0 chr2 215471994 215472052 -35215802 + MIR SINE MIR 137 194 -68 * 493 252 8 0 chr2 215472054 215472173 -35215681 + MIR SINE MIR 137 256 -6 377 325 75 21 chr2 215472256 215472496 -35215358 + L2 LINE L2 2725 2977 -337 396 278 35 17 chr2 215472845 215472960 -35214894 + L2 LINE L2 3181 3297 -16 278 340 64 11 chr2 215472966 215473060 -35214794 - L2 LINE L2 -38 3234 3136 33 0 0 0 chr2 215473238 215473271 -35214583 + AT_rich Low_complexity Low_complexity 1 33 0 26 74 0 0 chr2 215473514 215473568 -35214286 + AT_rich Low_complexity Low_complexity 1 54 0 570 190 60 0 chr2 215475406 215475522 -35212332 - MLT1A1 LTR MaLR -242 123 1 5736 119 19 4 chr2 215475841 215476909 -35210945 + L1PA16 LINE L1 5086 6165 -1 22 70 0 0 chr2 215477029 215477072 -35210782 + AT_rich Low_complexity Low_complexity 1 43 0 1848 303 148 14 chr2 215477871 215478982 -35208872 + L2 LINE L2 1961 3209 -104 460 151 14 0 chr2 215478995 215479068 -35208786 + MER96 DNA MER1_type? 12 85 -90 328 373 0 0 chr2 215479091 215479201 -35208653 + L2 LINE L2 3204 3313 0 1171 128 44 5 chr2 215479357 215479560 -35208294 - MER44D DNA MER2_type -5 604 394 1044 158 0 29 chr2 215479626 215479797 -35208057 - AluSg/x SINE Alu -14 298 133 574 190 20 0 chr2 215479797 215479897 -35207957 - MER44D DNA MER2_type -237 372 1 2325 94 0 3 chr2 215479915 215480222 -35207632 + AluY SINE Alu 1 306 -5 2327 80 3 16 chr2 215480766 215481079 -35206775 + AluSp SINE Alu 4 312 -1 14189 138 33 7 chr2 215481099 215483456 -35204398 - Tigger1 DNA MER2_type 0 2418 1 418 276 112 27 chr2 215483896 215484226 -35203628 + HAL1b LINE L1 122 479 -869 374 262 118 31 chr2 215484254 215484366 -35203488 + HAL1b LINE L1 533 634 -714 1845 203 98 28 chr2 215484366 215484838 -35203016 - MLT1D LTR MaLR 0 505 1 374 262 118 31 chr2 215484838 215484954 -35202900 + HAL1b LINE L1 634 781 -567 33 73 0 0 chr2 215484969 215485037 -35202817 + AT_rich Low_complexity Low_complexity 1 68 0 37538 30 24 3 chr2 215485053 215490470 -35197384 - L1PA3 LINE L1 0 6155 624 1631 70 5 0 chr2 215490470 215490685 -35197169 - L1PA3 LINE L1 -5930 216 1 248 214 143 10 chr2 215490710 215490808 -35197046 + L1ME4a LINE L1 5977 6087 -34 3629 68 10 2 chr2 215491008 215491497 -35196357 + L1PA13 LINE L1 5671 6163 0 230 118 39 0 chr2 215491505 215491556 -35196298 + A-rich Low_complexity Low_complexity 4 56 0 23 0 0 0 chr2 215491634 215491657 -35196197 + AT_rich Low_complexity Low_complexity 1 23 0 374 23 0 0 chr2 215492198 215492264 -35195590 + L1PA4 LINE L1 6094 6159 0 199 340 44 68 chr2 215492264 215492585 -35195269 - L2 LINE L2 -90 3223 2911 359 310 59 67 chr2 215492587 215492958 -35194896 + L1M2 LINE L1 4 371 -6797 283 137 55 82 chr2 215493493 215493566 -35194288 + L1M2 LINE L1 2589 2659 -4509 1165 152 53 83 chr2 215493587 215493889 -35193965 - L1MA7 LINE L1 -2 6289 5997 242 346 50 0 chr2 215494268 215494369 -35193485 - MIR3 SINE MIR -35 173 68 22 0 0 0 chr2 215494470 215494492 -35193362 + AT_rich Low_complexity Low_complexity 1 22 0 327 364 85 8 chr2 215494571 215494700 -35193154 + MIR SINE MIR 16 154 -108 4774 87 26 2 chr2 215496432 215497076 -35190778 - PABL_A LTR ERV1 0 660 1 26 0 0 0 chr2 215497578 215497604 -35190250 + AT_rich Low_complexity Low_complexity 1 26 0 328 203 25 13 chr2 215497684 215497763 -35190091 - L1MB8 LINE L1 -173 6005 5926 3737 69 36 56 chr2 215497763 215498334 -35189520 - MER41A LTR ERV1 0 557 1 2261 192 116 17 chr2 215498334 215498918 -35188936 - L1MB8 LINE L1 -261 5917 5276 12717 103 14 3 chr2 215501435 215502476 -35185378 - L1P LINE L1 -2772 3374 2301 225 0 0 0 chr2 215502476 215502501 -35185353 + (TTG)n Simple_repeat Simple_repeat 2 26 0 12717 103 14 3 chr2 215502501 215503347 -35184507 - L1P LINE L1 -3845 2301 1466 272 203 27 0 chr2 215503558 215503632 -35184222 + CT-rich Low_complexity Low_complexity 3 78 0 3035 196 55 2 chr2 215503790 215504409 -35183445 - MER82 DNA MER2_type -1 652 1 254 294 56 16 chr2 215504774 215504900 -35182954 - MIR SINE MIR 0 262 132 475 297 74 11 chr2 215504903 215505078 -35182776 + MLT1K LTR MaLR 315 500 -88 182 208 19 0 chr2 215505089 215505142 -35182712 + CT-rich Low_complexity Low_complexity 2 55 0 303 278 32 48 chr2 215505236 215505362 -35182492 - MER5B DNA MER1_type -48 130 7 393 216 96 41 chr2 215505775 215505993 -35181861 - L1MC5 LINE L1 -254 7707 7478 207 0 0 0 chr2 215506391 215506414 -35181440 + (TA)n Simple_repeat Simple_repeat 1 23 0 235 333 87 32 chr2 215508488 215508614 -35179240 - L2 LINE L2 -3 3269 3137 1124 176 51 34 chr2 215508982 215509058 -35178796 - MER33 DNA MER1_type -2261 324 251 2284 98 0 3 chr2 215509058 215509353 -35178501 + AluSq SINE Alu 1 294 -19 1124 176 51 34 chr2 215509353 215509571 -35178283 - MER33 DNA MER1_type -2334 251 25 680 200 81 6 chr2 215510605 215510765 -35177089 - MIR SINE MIR -74 188 17 398 232 80 18 chr2 215511354 215511466 -35176388 + MER91C DNA MER1_type 1 119 -21 182 196 0 87 chr2 215512275 215512321 -35175533 + MER5A DNA MER1_type 51 92 -97 210 338 12 12 chr2 215512596 215512676 -35175178 - MIR SINE MIR -70 192 113 180 77 0 0 chr2 215513275 215513301 -35174553 + (CAAGG)n Simple_repeat Simple_repeat 5 30 0 332 151 81 35 chr2 215513620 215513706 -35174148 + L1MC4 LINE L1 6615 6704 -1338 4753 176 23 44 chr2 215514951 215516005 -35171849 - L1MA10 LINE L1 0 6334 5303 230 224 24 88 chr2 215516002 215516127 -35171727 - L1MEc LINE L1 -5589 807 691 * 367 226 9 66 chr2 215516155 215516261 -35171593 - L1MEc LINE L1 -5794 602 503 21 36 0 0 chr2 215516832 215516860 -35170994 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 215517839 215517864 -35169990 + AT_rich Low_complexity Low_complexity 1 25 0 208 225 213 12 chr2 215518300 215518380 -35169474 - MIR SINE MIR -51 211 116 198 351 89 26 chr2 215518714 215518905 -35168949 - L3b LINE CR1 -11 1572 1370 245 358 285 7 chr2 215518957 215519108 -35168746 - MIR3 SINE MIR -13 195 3 22 0 0 0 chr2 215519807 215519829 -35168025 + AT_rich Low_complexity Low_complexity 1 22 0 239 268 0 0 chr2 215520101 215520157 -35167697 - L1MC/D LINE L1 -2067 5741 5686 9810 42 6 0 chr2 215520430 215522411 -35165443 + L1PA5 LINE L1 4165 6152 -2 659 274 10 10 chr2 215523101 215523298 -35164556 - MIR SINE MIR 0 262 66 180 0 0 0 chr2 215524012 215524032 -35163822 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 201 39 0 0 chr2 215524049 215524075 -35163779 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 36620 33 1 0 chr2 215524077 215529307 -35158547 - L1PA2 LINE L1 -4 6151 918 7374 88 15 23 chr2 215529558 215530638 -35157216 - MER11C LTR ERVK 0 1071 1 1191 139 106 0 chr2 215530902 215531110 -35156744 + MER30 DNA MER1_type 1 230 0 1123 249 61 33 chr2 215531300 215531662 -35156192 + MLT1A2 LTR MaLR 1 372 -2 27 29 0 0 chr2 215531883 215531917 -35155937 + AT_rich Low_complexity Low_complexity 1 34 0 478 369 44 4 chr2 215532317 215532569 -35155285 - MIR SINE MIR 0 262 1 6630 74 20 0 chr2 215533653 215534585 -35153269 + L1PA8 LINE L1 5215 6165 -7 513 0 0 0 chr2 215536061 215536118 -35151736 + (TG)n Simple_repeat Simple_repeat 1 57 0 3131 192 115 11 chr2 215536861 215536925 -35150929 + Charlie5 DNA MER1_type 1206 1262 -1362 2333 159 88 5 chr2 215536925 215537366 -35150488 + MER66A LTR ERV1 1 478 0 3131 192 115 11 chr2 215537366 215538133 -35149721 + Charlie5 DNA MER1_type 1262 2124 -500 763 163 220 0 chr2 215538141 215538368 -35149486 + Charlie5 DNA MER1_type 2343 2619 0 1103 157 161 71 chr2 215538913 215539063 -35148791 - AluJo SINE Alu -11 291 156 2531 81 0 0 chr2 215539063 215539373 -35148481 - AluY SINE Alu -1 310 1 1103 157 161 71 chr2 215539373 215539489 -35148365 - AluJo SINE Alu -146 156 1 2059 157 38 55 chr2 215540460 215540911 -35146943 - L1MA7 LINE L1 0 6291 5849 1108 92 135 11 chr2 215540911 215541096 -35146758 + L1M2 LINE L1 5500 5707 -584 306 368 73 8 chr2 215541350 215541522 -35146332 + MIR3 SINE MIR 1 185 -23 207 0 0 0 chr2 215541697 215541720 -35146134 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 28 61 0 0 chr2 215541987 215542036 -35145818 + AT_rich Low_complexity Low_complexity 1 49 0 12232 185 77 13 chr2 215542566 215547419 -35140435 + L1PB1 LINE L1 1654 6867 0 842 233 92 52 chr2 215547509 215548006 -35139848 + MLT1D LTR MaLR 29 470 -35 850 289 50 39 chr2 215548203 215548688 -35139166 - L1ME LINE L1 -305 5816 5327 1890 122 16 35 chr2 215550078 215550389 -35137465 - AluSg SINE Alu -5 305 1 208 327 9 37 chr2 215550629 215550736 -35137118 - MIR SINE MIR -55 207 104 1885 145 35 30 chr2 215551057 215551430 -35136424 + THE1C LTR MaLR 1 375 0 301 217 123 9 chr2 215551816 215551922 -35135932 - L1ME3A LINE L1 -4 6166 6049 183 186 0 0 chr2 215551927 215551970 -35135884 + CT-rich Low_complexity Low_complexity 2 44 0 384 279 14 50 chr2 215552098 215552238 -35135616 + MIR SINE MIR 117 251 -11 183 326 23 23 chr2 215552278 215552364 -35135490 + L2 LINE L2 2607 2692 -622 1624 193 20 0 chr2 215552993 215553294 -35134560 + AluJo SINE Alu 1 307 -5 240 143 0 24 chr2 215553460 215553502 -35134352 - MIR SINE MIR -61 201 161 18114 132 16 18 chr2 215554686 215555500 -35132354 - L1PA10 LINE L1 -6 6162 5348 2164 118 3 0 chr2 215555500 215555787 -35132067 - AluSx SINE Alu -24 288 1 18114 132 16 18 chr2 215555787 215558851 -35129003 - L1PA10 LINE L1 -820 5348 2283 7454 36 0 0 chr2 215559175 215560378 -35127476 + L1PA4 LINE L1 4947 6149 -6 41 0 0 0 chr2 215562024 215562065 -35125789 + AT_rich Low_complexity Low_complexity 1 41 0 10511 92 5 1 chr2 215562824 215564296 -35123558 + L1P LINE L1 3402 4879 -1267 544 300 101 25 chr2 215565049 215565286 -35122568 + LTR33 LTR ERVL 26 280 -241 291 296 80 0 chr2 215566407 215566495 -35121359 - MLT1G1 LTR MaLR -16 579 485 356 322 134 30 chr2 215566622 215566824 -35121030 - MLT1H LTR MaLR -302 247 25 203 219 94 31 chr2 215567404 215567468 -35120386 - MIR SINE MIR -85 177 110 502 328 61 25 chr2 215568939 215569137 -35118717 - MIR SINE MIR -31 231 27 21 36 0 0 chr2 215569206 215569234 -35118620 + AT_rich Low_complexity Low_complexity 1 28 0 470 380 16 9 chr2 215569262 215569496 -35118358 + L1M3c LINE L1 184 913 -5218 2621 253 26 9 chr2 215569685 215570632 -35117222 + L1M3c LINE L1 900 1840 -4371 * 28875 110 37 23 chr2 215570631 215575847 -35112007 + L1PA7 LINE L1 1150 7268 -324 2399 90 3 14 chr2 215575947 215576293 -35111561 + L1PA7 LINE L1 7251 7592 0 7836 219 98 27 chr2 215576306 215576470 -35111384 + L1MB1 LINE L1 1625 1776 -4628 2942 6 0 0 chr2 215576470 215576787 -35111067 + AluYb8 SINE Alu 1 317 -1 7836 219 98 27 chr2 215576787 215577341 -35110513 + L1MB1 LINE L1 1776 2289 -4115 2577 124 5 36 chr2 215577341 215577728 -35110126 + L1MA3 LINE L1 5871 6244 -61 1856 157 4 0 chr2 215577728 215578009 -35109845 + AluSx SINE Alu 15 296 -16 2577 124 5 36 chr2 215578009 215578065 -35109789 + L1MA3 LINE L1 6244 6300 -5 7836 219 98 27 chr2 215578065 215581483 -35106371 + L1MB1 LINE L1 2289 6260 -144 1689 158 86 23 chr2 215581483 215581831 -35106023 - THE1C LTR MaLR 0 375 6 21 0 0 0 chr2 215581983 215582004 -35105850 + AT_rich Low_complexity Low_complexity 1 21 0 1469 209 114 8 chr2 215583478 215583836 -35104018 + MSTD LTR MaLR 1 396 0 39 60 0 0 chr2 215583841 215583908 -35103946 + AT_rich Low_complexity Low_complexity 1 67 0 2051 169 0 18 chr2 215585215 215585558 -35102296 - MER1B DNA MER1_type 0 337 1 214 237 17 51 chr2 215585819 215585878 -35101976 - L2 LINE L2 -8 3305 3249 2669 158 5 9 chr2 215586053 215586496 -35101358 + MER65A LTR ERV1 5 445 0 1870 78 0 23 chr2 215586959 215587244 -35100610 + L1PA7 LINE L1 5904 6154 0 21 0 0 0 chr2 215587376 215587397 -35100457 + AT_rich Low_complexity Low_complexity 1 21 0 718 294 53 16 chr2 215587584 215587829 -35100025 + MIR SINE MIR 5 258 -4 353 221 0 0 chr2 215588148 215588216 -35099638 + MLT1A2 LTR MaLR 1 68 -306 865 293 35 35 chr2 215588494 215588805 -35099049 + MLT1A2 LTR MaLR 1 311 -63 2313 90 0 3 chr2 215589205 215589504 -35098350 - AluSq SINE Alu -15 298 1 35 63 0 0 chr2 215589590 215589653 -35098201 + AT_rich Low_complexity Low_complexity 1 63 0 2319 63 0 11 chr2 215589750 215590067 -35097787 - AluY SINE Alu 0 314 1 39954 71 9 2 chr2 215590574 215596667 -35091187 + L1PA5 LINE L1 13 6150 -4 851 145 52 35 chr2 215596672 215596844 -35091010 + MER74A LTR ERVL 376 550 -8 2388 35 0 3 chr2 215597090 215597377 -35090477 - L1PA3 LINE L1 -3 6152 5867 5944 140 12 3 chr2 215598856 215600163 -35087691 - L1PB1 LINE L1 -1 6150 4834 24 32 0 0 chr2 215601015 215601046 -35086808 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr2 215601223 215601253 -35086601 + AT_rich Low_complexity Low_complexity 1 30 0 2008 127 0 33 chr2 215601442 215601749 -35086105 - AluSc SINE Alu -12 297 1 494 275 71 46 chr2 215601950 215602190 -35085664 + LTR43-int LTR ERV1 1438 1683 -3115 188 146 0 24 chr2 215602231 215602272 -35085582 + L2 LINE L2 1654 1693 -1621 299 187 27 13 chr2 215602691 215602766 -35085088 + LTR43-int LTR ERV1 1718 1793 -5412 448 295 0 14 chr2 215602789 215602931 -35084923 + LTR43-int LTR ERV1 1523 1611 -1477 367 259 199 6 chr2 215603467 215603633 -35084221 + MIR SINE MIR 5 202 -60 2151 66 15 4 chr2 215604079 215604352 -35083502 - AluSc SINE Alu -11 298 23 3235 182 43 34 chr2 215604837 215605542 -35082312 + MER50 LTR ERV1 1 711 -23 1694 201 0 0 chr2 215605631 215605919 -35081935 + AluJb SINE Alu 1 288 -24 774 229 112 18 chr2 215606516 215606890 -35080964 - LTR50 LTR ERVL -2 793 391 2103 103 0 7 chr2 215606899 215607199 -35080655 + L1PB1 LINE L1 5847 6144 -7 299 281 138 6 chr2 215607341 215607501 -35080353 - LTR50 LTR ERVL -614 181 1 1891 261 133 49 chr2 215608249 215608321 -35079533 - L2 LINE L2 -366 2948 2883 3214 156 23 70 chr2 215608321 215609046 -35078808 + LTR8 LTR ERV1 1 691 0 1891 261 133 49 chr2 215609046 215609877 -35077977 - L2 LINE L2 -431 2883 1969 1886 38 8 8 chr2 215609967 215610203 -35077651 - AluY SINE Alu -2 309 74 332 235 0 12 chr2 215610562 215610647 -35077207 + MLT1D LTR MaLR 35 118 -387 4076 251 22 59 chr2 215610864 215612424 -35075430 + L1MC1 LINE L1 3832 5333 -813 * 11134 60 5 1 chr2 215612421 215613926 -35073928 - L1PA5 LINE L1 -3132 3014 1504 18575 46 8 0 chr2 215613927 215617048 -35070806 + L1PA5 LINE L1 3023 6153 -1 4780 169 37 12 chr2 215617053 215618003 -35069851 + L1MC1 LINE L1 5319 6292 -41 1231 241 51 0 chr2 215618037 215618331 -35069523 - MER74B LTR ERVL -245 377 69 668 307 85 10 chr2 215618495 215619082 -35068772 - L1M4 LINE L1 -1830 4316 3686 1994 133 36 21 chr2 215619943 215620274 -35067580 - MER1B DNA MER1_type 0 337 2 1592 157 0 7 chr2 215621380 215621673 -35066181 + L1MA6 LINE L1 6009 6299 -1 1174 152 28 38 chr2 215621986 215622197 -35065657 + AluJb SINE Alu 91 299 -13 3874 220 15 35 chr2 215622221 215623079 -35064775 + L1PA16 LINE L1 5321 6161 -5 23 0 0 0 chr2 215623479 215623502 -35064352 + AT_rich Low_complexity Low_complexity 1 23 0 2394 160 41 19 chr2 215623799 215624218 -35063636 - MSTC LTR MaLR 0 428 1 5702 86 21 16 chr2 215624243 215625135 -35062719 + L1PB1 LINE L1 5254 6150 -1 1239 195 151 71 chr2 215625338 215625847 -35062007 + MER39 LTR ERV1 6 689 -18 234 91 0 0 chr2 215626320 215626353 -35061501 + (CA)n Simple_repeat Simple_repeat 2 34 0 1544 146 30 104 chr2 215626707 215627043 -35060811 + AluYb8 SINE Alu 1 311 -7 3401 40 4 67 chr2 215628661 215629139 -35058715 + LTR7 LTR ERV1 1 448 -2 14571 105 33 12 chr2 215629141 215631957 -35055897 + HERVH LTR ERV1 1 2987 -4726 788 152 41 0 chr2 215631951 215632096 -35055758 + HERVH LTR ERV1 3140 3290 -4423 * 3131 112 6 6 chr2 215632086 215632588 -35055266 + HERVH LTR ERV1 3492 3993 -3720 3335 127 11 2 chr2 215632590 215633116 -35054738 + HERVH LTR ERV1 4488 5018 -2695 799 0 11 0 chr2 215633219 215633314 -35054540 + LTR7 LTR ERV1 353 448 -2 24 0 0 0 chr2 215633466 215633490 -35054364 + AT_rich Low_complexity Low_complexity 1 24 0 381 345 58 18 chr2 215633596 215633767 -35054087 - MIR SINE MIR -55 207 30 649 169 155 0 chr2 215633979 215634119 -35053735 - MSTA LTR MaLR 0 428 267 4041 182 69 17 chr2 215634119 215634592 -35053262 - MER52A LTR ERV1 0 1755 1308 5953 46 42 16 chr2 215634592 215635352 -35052502 + LTR17 LTR ERV1 1 780 0 4041 182 69 17 chr2 215635352 215636336 -35051518 - MER52A LTR ERV1 -447 1308 40 888 158 226 5 chr2 215636354 215636575 -35051279 - MSTA LTR MaLR -158 270 1 234 286 113 38 chr2 215637472 215637605 -35050249 - MIR SINE MIR -112 150 8 274 186 68 0 chr2 215637693 215637752 -35050102 - MLT1K LTR MaLR 0 588 526 311 392 53 0 chr2 215637966 215638137 -35049717 - L2 LINE L2 -257 3015 2836 224 119 0 24 chr2 215638147 215638189 -35049665 + (TA)n Simple_repeat Simple_repeat 2 42 0 187 357 121 33 chr2 215638272 215638454 -35049400 - L2 LINE L2 -567 2747 2550 471 306 35 43 chr2 215638736 215638968 -35048886 - L2 LINE L2 -1144 2170 1941 2024 166 51 8 chr2 215639091 215639465 -35048389 + MLT1B LTR MaLR 1 390 0 205 321 28 37 chr2 215639466 215639575 -35048279 - L2 LINE L2 -1415 1899 1792 2259 119 7 0 chr2 215640980 215641290 -35046564 + AluSx SINE Alu 1 312 0 198 288 15 0 chr2 215643211 215643277 -35044577 - L2 LINE L2 -86 3227 3161 24 32 0 0 chr2 215644461 215644492 -35043362 + AT_rich Low_complexity Low_complexity 1 31 0 229 261 92 15 chr2 215645906 215645971 -35041883 + MIR SINE MIR 12 81 -181 378 0 0 0 chr2 215648015 215648057 -35039797 + (TG)n Simple_repeat Simple_repeat 1 42 0 303 85 0 0 chr2 215648057 215648104 -35039750 + (GA)n Simple_repeat Simple_repeat 2 48 0 213 258 0 0 chr2 215649121 215649187 -35038667 + (TA)n Simple_repeat Simple_repeat 1 66 0 1522 255 131 30 chr2 215649214 215649660 -35038194 - MLT1E LTR MaLR 0 593 83 2978 93 42 5 chr2 215649660 215650088 -35037766 - MLT2A1 LTR ERVL 0 444 1 1522 255 131 30 chr2 215650088 215650175 -35037679 - MLT1E LTR MaLR -510 83 6 889 186 79 42 chr2 215650247 215650462 -35037392 + MER58A DNA MER1_type 1 223 -1 238 333 67 0 chr2 215650783 215650873 -35036981 - MIR3 SINE MIR -39 169 74 270 121 110 18 chr2 215650994 215651068 -35036786 - L1MD3 LINE L1 0 7995 7706 555 320 69 46 chr2 215651128 215651169 -35036685 + L3 LINE CR1 1069 1108 -469 2135 154 86 8 chr2 215651169 215651566 -35036288 - MSTA LTR MaLR 0 428 1 555 320 69 46 chr2 215651566 215651915 -35035939 + L3 LINE CR1 1108 1468 -109 901 160 30 157 chr2 215651945 215652283 -35035571 - MER51C LTR ERV1 0 640 346 2071 81 7 0 chr2 215652864 215653159 -35034695 + L1PA13 LINE L1 5867 6163 0 25 0 0 0 chr2 215653262 215653287 -35034567 + AT_rich Low_complexity Low_complexity 1 25 0 212 175 0 25 chr2 215653794 215653834 -35034020 + GA-rich Low_complexity Low_complexity 3 41 0 30 77 0 0 chr2 215654351 215654416 -35033438 + AT_rich Low_complexity Low_complexity 1 65 0 309 51 0 0 chr2 215654488 215654527 -35033327 + (TG)n Simple_repeat Simple_repeat 1 39 0 2236 59 15 59 chr2 215654790 215655114 -35032740 - AluY SINE Alu -1 310 1 2089 113 0 13 chr2 215655366 215655666 -35032188 + AluY SINE Alu 1 296 -15 490 206 74 63 chr2 215656803 215656978 -35030876 + LTR41 LTR ERVL 1 177 -596 706 242 31 68 chr2 215657113 215657317 -35030537 + L1M4 LINE L1 2665 2854 -3292 2411 54 3 3 chr2 215657317 215657614 -35030240 + AluY SINE Alu 1 297 -14 706 242 31 68 chr2 215657614 215657735 -35030119 + L1M4 LINE L1 2854 2978 -3168 231 321 86 36 chr2 215657735 215657875 -35029979 + MIR3 SINE MIR 60 206 -2 21 57 0 0 chr2 215657950 215657985 -35029869 + AT_rich Low_complexity Low_complexity 1 35 0 586 345 24 5 chr2 215660192 215660398 -35027456 + MIR SINE MIR 17 226 -36 7701 22 0 0 chr2 215660488 215661424 -35026430 - L1PA3 LINE L1 -1 6154 5220 5129 20 2 0 chr2 215661424 215662032 -35025822 + L1PA3 LINE L1 4621 5229 -917 563 315 76 5 chr2 215663510 215663707 -35024147 + MIR SINE MIR 24 234 -28 267 183 19 96 chr2 215664865 215664969 -35022885 + MLT1I LTR MaLR 285 552 -15 207 150 25 0 chr2 215665668 215665708 -35022146 + L2 LINE L2 1883 1923 -1391 2055 124 6 22 chr2 215665714 215666116 -35021738 - AluSg SINE Alu 0 397 1 1452 300 198 14 chr2 215666126 215666928 -35020926 + L2 LINE L2 1931 2878 -394 1969 110 0 63 chr2 215667766 215668084 -35019770 - AluSx SINE Alu -14 298 1 25 0 0 0 chr2 215668785 215668810 -35019044 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr2 215668841 215668876 -35018978 + AT_rich Low_complexity Low_complexity 1 35 0 231 241 168 54 chr2 215669003 215669206 -35018648 - LTR16C LTR ERVL -5 486 227 3218 191 26 3 chr2 215669622 215670301 -35017553 - L1MA7 LINE L1 0 6291 5597 3281 205 36 4 chr2 215670327 215671039 -35016815 + L1 LINE L1 4429 5163 -983 283 310 81 31 chr2 215671214 215671529 -35016325 + L1ME LINE L1 5328 5656 -514 22 0 0 0 chr2 215671960 215671982 -35015872 + AT_rich Low_complexity Low_complexity 1 22 0 188 331 60 38 chr2 215672716 215672849 -35015005 - MIR SINE MIR -48 214 79 180 0 0 0 chr2 215672919 215672939 -35014915 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 1219 286 70 34 chr2 215673247 215673989 -35013865 + Zaphod DNA AcHobo 1 789 -3242 245 229 0 0 chr2 215673993 215674054 -35013800 + MER115 DNA AcHobo 601 661 -32 2223 105 0 32 chr2 215674239 215674554 -35013300 + AluSx SINE Alu 5 309 -3 193 374 126 5 chr2 215675006 215675212 -35012642 - MIR SINE MIR 0 262 32 318 233 272 0 chr2 215675293 215675396 -35012458 - MER5A DNA MER1_type 0 189 59 249 303 10 40 chr2 215675412 215675511 -35012343 - MIR3 SINE MIR -47 161 66 2433 46 0 3 chr2 215675890 215676198 -35011656 - AluY SINE Alu 0 307 1 740 165 47 0 chr2 215676214 215676341 -35011513 - FLAM_A SINE Alu 0 133 1 254 313 17 61 chr2 215678691 215678806 -35009048 + L2 LINE L2 3203 3312 -1 275 337 96 48 chr2 215679110 215679297 -35008557 + MIR3 SINE MIR 13 208 0 241 389 7 14 chr2 215679546 215679690 -35008164 + MER5A DNA MER1_type 2 144 -45 295 198 121 9 chr2 215680592 215680708 -35007146 + L1ME LINE L1 5292 5420 -744 768 32 0 0 chr2 215680872 215680967 -35006887 - L1PA3 LINE L1 0 6155 6061 6181 26 1 0 chr2 215680967 215681690 -35006164 + L1PA3 LINE L1 5373 6096 -59 2137 38 11 0 chr2 215681728 215681995 -35005859 - L1PA4 LINE L1 -251 5904 5635 2095 35 0 0 chr2 215681995 215682247 -35005607 + L1PA4 LINE L1 5894 6147 -8 2444 79 0 3 chr2 215682353 215682657 -35005197 - AluY SINE Alu -8 303 1 1997 135 0 3 chr2 215682752 215683065 -35004789 - AluSx SINE Alu 0 312 1 315 244 39 0 chr2 215683067 215683145 -35004709 + MLT1I LTR MaLR 79 159 -250 2518 108 11 3 chr2 215683755 215684116 -35003738 + THE1B LTR MaLR 1 364 0 4194 85 4 0 chr2 215684404 215684956 -35002898 + MER41A LTR ERV1 1 554 0 286 254 28 106 chr2 215685002 215685219 -35002635 - L1ME3A LINE L1 -230 5940 5741 180 77 0 0 chr2 215685838 215685864 -35001990 + (TA)n Simple_repeat Simple_repeat 2 27 0 958 191 50 8 chr2 215687178 215687419 -35000435 + HsTC2 DNA Tc2 1645 1895 -3 344 299 26 0 chr2 215687650 215687767 -35000087 + LTR67 LTR ERVL 438 557 0 431 288 59 38 chr2 215687985 215688273 -34999581 + L1ME LINE L1 5526 5819 -302 285 283 66 85 chr2 215688878 215689090 -34998764 + HsTC2 DNA Tc2 270 477 -1421 530 279 68 38 chr2 215689170 215689407 -34998447 + HsTC2 DNA Tc2 642 885 -1013 335 174 0 43 chr2 215690989 215691058 -34996796 + L1MC4a LINE L1 7225 7290 -518 645 203 6 44 chr2 215691234 215691392 -34996462 + L1MD3 LINE L1 7368 7519 -476 1885 215 53 0 chr2 215691471 215691903 -34995951 + L1MD3 LINE L1 7527 7981 -14 1047 247 51 66 chr2 215691923 215692431 -34995423 + L1ME2 LINE L1 5665 6161 -5 231 211 53 0 chr2 215693043 215693100 -34994754 - L2 LINE L2 -957 2357 2298 889 187 0 13 chr2 215693154 215693309 -34994545 + AluJo SINE Alu 1 153 -159 936 97 15 15 chr2 215693385 215693519 -34994335 + AluJo SINE Alu 160 293 -19 473 83 0 0 chr2 215693973 215694045 -34993809 - L1MA3 LINE L1 0 6305 6234 21 36 0 0 chr2 215694169 215694197 -34993657 + AT_rich Low_complexity Low_complexity 1 28 0 2055 90 43 0 chr2 215694204 215694482 -34993372 - AluSp SINE Alu -20 293 4 36 0 0 0 chr2 215694561 215694597 -34993257 + AT_rich Low_complexity Low_complexity 1 36 0 348 24 0 0 chr2 215694621 215694662 -34993192 + (CA)n Simple_repeat Simple_repeat 2 42 0 295 380 81 20 chr2 215694700 215695109 -34992745 - L2 LINE L2 -240 3032 2596 1996 140 0 0 chr2 215695123 215695408 -34992446 + AluSg SINE Alu 3 287 -23 407 302 74 74 chr2 215695879 215696382 -34991472 - MLT1J LTR MaLR -8 503 1 633 299 59 18 chr2 215696465 215696686 -34991168 + MIR SINE MIR 33 262 0 2292 100 0 34 chr2 215698703 215699023 -34988831 + AluSc SINE Alu 1 309 0 23 33 0 0 chr2 215699364 215699394 -34988460 + AT_rich Low_complexity Low_complexity 1 30 0 3818 108 10 2 chr2 215700096 215700689 -34987165 + L1PA7 LINE L1 2698 3295 -2851 6849 67 3 1 chr2 215700789 215702094 -34985760 + L1PA7 LINE L1 4845 6151 -3 193 339 70 43 chr2 215702604 215702719 -34985135 - MIR SINE MIR -28 234 117 360 254 53 35 chr2 215704743 215704857 -34982997 + MIR SINE MIR 65 180 -82 1320 185 65 0 chr2 215708427 215708735 -34979119 - MER33 DNA MER1_type -4 320 1 249 245 32 53 chr2 215708780 215708874 -34978980 + MLT1I LTR MaLR 318 409 0 227 140 20 0 chr2 215710051 215710101 -34977753 + (TG)n Simple_repeat Simple_repeat 2 52 0 887 168 6 0 chr2 215711122 215711289 -34976565 + L1MA3 LINE L1 6135 6302 -3 22 0 0 0 chr2 215711758 215711780 -34976074 + AT_rich Low_complexity Low_complexity 1 22 0 437 291 62 56 chr2 215712347 215712739 -34975115 + MLT1H LTR MaLR 38 532 -17 257 358 126 51 chr2 215712765 215713139 -34974715 - L2 LINE L2 -47 3225 2824 2071 113 7 13 chr2 215713271 215713571 -34974283 - AluSq SINE Alu -5 308 11 25 51 0 0 chr2 215713827 215713866 -34973988 + AT_rich Low_complexity Low_complexity 1 39 0 3718 109 213 118 chr2 215714128 215715433 -34972421 + pTR5 LTR ERV1 741 2438 0 296 336 90 19 chr2 215715513 215715769 -34972085 - L1ME LINE L1 -428 5734 5461 198 353 15 0 chr2 215716578 215716646 -34971208 + MIR3 SINE MIR 115 183 -25 1903 104 37 4 chr2 215716913 215717183 -34970671 + AluSq SINE Alu 1 279 -34 2007 74 0 0 chr2 215717183 215717439 -34970415 + AluY SINE Alu 48 303 -8 783 298 33 8 chr2 215717631 215717873 -34969981 + MIR SINE MIR 13 260 -2 186 263 32 74 chr2 215717806 215717901 -34969953 - MIR SINE MIR -6 256 166 * 249 360 172 0 chr2 215718741 215718944 -34968910 + L3b LINE CR1 1296 1533 -50 197 270 140 20 chr2 215719221 215719321 -34968533 - MIR SINE MIR -72 190 79 1052 110 0 0 chr2 215720286 215720431 -34967423 - AluSg/x SINE Alu -10 302 158 554 299 179 14 chr2 215720921 215721212 -34966642 + L2 LINE L2 2539 2877 -437 273 267 238 90 chr2 215721242 215721519 -34966335 + L2 LINE L2 2995 3312 -1 321 367 96 7 chr2 215721703 215721973 -34965881 - L2 LINE L2 -780 2534 2241 198 279 48 58 chr2 215722012 215722116 -34965738 - MIR SINE MIR -57 205 103 198 0 0 0 chr2 215722426 215722448 -34965406 + (GA)n Simple_repeat Simple_repeat 1 22 0 371 148 12 37 chr2 215723099 215723180 -34964674 - MADE1 DNA Mariner -1 79 1 522 286 55 51 chr2 215723260 215723477 -34964377 + MIR SINE MIR 32 249 -13 371 306 72 34 chr2 215723477 215723686 -34964168 - L1ME LINE L1 -313 5808 5592 392 280 143 28 chr2 215724970 215725152 -34962702 - MIR SINE MIR -54 208 6 1800 294 121 25 chr2 215729842 215731344 -34956510 + L1MEc LINE L1 2043 3706 -2509 2447 60 0 29 chr2 215731344 215731660 -34956194 + AluY SINE Alu 1 307 -4 1800 294 121 25 chr2 215731660 215731964 -34955890 + L1MEc LINE L1 3706 3979 -2236 1344 267 75 34 chr2 215731965 215732547 -34955307 + MLT1E2 LTR MaLR 1 626 0 867 291 56 26 chr2 215732554 215733127 -34954727 + L1MEc LINE L1 3983 4572 -1643 2219 86 3 26 chr2 215733238 215733542 -34954312 + AluSp SINE Alu 1 297 -16 335 346 52 16 chr2 215733562 215733871 -34953983 + L1MEc LINE L1 4796 5115 -1100 429 208 212 19 chr2 215733919 215734131 -34953723 + L1MB7 LINE L1 2779 3031 -3115 1732 155 19 0 chr2 215734137 215734446 -34953408 + L1MA4 LINE L1 5975 6289 -11 1799 182 0 3 chr2 215734461 215734788 -34953066 + AluJo SINE Alu 3 312 0 665 278 113 48 chr2 215734790 215735650 -34952204 + L1ME2 LINE L1 792 1707 -4689 704 263 48 52 chr2 215735680 215736011 -34951843 + L1ME2 LINE L1 1756 2086 -4131 1609 189 3 7 chr2 215736011 215736317 -34951537 + AluJo SINE Alu 1 305 -7 704 263 48 52 chr2 215736317 215736509 -34951345 + L1ME2 LINE L1 2086 2277 -3940 971 176 16 0 chr2 215736514 215736707 -34951147 + L1MA8 LINE L1 6091 6286 -5 21 57 0 0 chr2 215736750 215736785 -34951069 + AT_rich Low_complexity Low_complexity 1 35 0 5815 206 64 23 chr2 215736785 215739127 -34948727 + L1MB7 LINE L1 3730 6158 -26 666 294 32 3 chr2 215739138 215739420 -34948434 + L1ME2 LINE L1 2341 2630 -3585 2854 237 31 41 chr2 215739567 215740167 -34947687 - L1ME1 LINE L1 -5 6161 5581 1764 217 18 28 chr2 215740167 215740564 -34947290 + MSTD LTR MaLR 2 394 -2 2854 237 31 41 chr2 215740564 215741165 -34946689 - L1ME1 LINE L1 -585 5581 4975 476 228 63 0 chr2 215741160 215741287 -34946567 + L1ME2 LINE L1 2748 2882 -3333 * 211 66 98 57 chr2 215741289 215741411 -34946443 + (TTTAA)n Simple_repeat Simple_repeat 2 128 0 2184 191 9 85 chr2 215741427 215741957 -34945897 - MLT2B1 LTR ERVL -30 490 1 484 252 40 0 chr2 215741997 215742148 -34945706 + L1ME2 LINE L1 2973 3129 -3086 410 217 26 9 chr2 215742151 215742266 -34945588 + L1MC2 LINE L1 2883 2999 -3147 5088 220 44 11 chr2 215742276 215744262 -34943592 + L1MC2 LINE L1 3884 5932 -412 1583 208 9 6 chr2 215744283 215744615 -34943239 + L1MC2 LINE L1 6002 6334 -10 2185 242 93 20 chr2 215744631 215745498 -34942356 + L1ME2 LINE L1 4548 5489 -744 1584 273 93 45 chr2 215745496 215746301 -34941553 - L1ME LINE L1 -5217 853 10 * 1279 233 14 47 chr2 215746313 215746335 -34941519 + L1ME2 LINE L1 5651 5672 -561 2583 11 0 0 chr2 215746335 215746620 -34941234 + AluYb8 SINE Alu 24 308 -10 1279 233 14 47 chr2 215746620 215747082 -34940772 + L1ME2 LINE L1 5672 6223 -10 394 331 74 6 chr2 215747530 215747712 -34940142 - MIR3 SINE MIR -11 197 4 414 265 147 18 chr2 215748007 215748177 -34939677 - MLT1K LTR MaLR 0 588 397 238 321 38 38 chr2 215748279 215748385 -34939469 - MLT1K LTR MaLR -357 231 126 582 324 159 2 chr2 215748567 215748962 -34938892 + LTR33A LTR ERVL 59 515 -8 243 0 0 0 chr2 215749065 215749092 -34938762 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 860 172 57 0 chr2 215749144 215749301 -34938553 - FRAM SINE Alu 0 166 1 196 269 134 32 chr2 215749552 215749738 -34938116 + MIR3 SINE MIR 4 208 0 400 204 22 124 chr2 215750219 215750356 -34937498 + L2 LINE L2 3191 3313 0 216 0 0 0 chr2 215751016 215751040 -34936814 + (CAG)n Simple_repeat Simple_repeat 3 26 0 332 336 10 0 chr2 215751041 215751145 -34936709 + CT-rich Low_complexity Low_complexity 2 106 0 22 35 0 0 chr2 215753103 215753132 -34934722 + AT_rich Low_complexity Low_complexity 1 29 0 39 22 0 0 chr2 215753242 215753288 -34934566 + AT_rich Low_complexity Low_complexity 1 46 0 195 42 0 0 chr2 215754764 215754788 -34933066 + (TGGG)n Simple_repeat Simple_repeat 1 24 0 242 244 0 37 chr2 215755385 215755467 -34932387 + CT-rich Low_complexity Low_complexity 1 79 0 21 36 0 0 chr2 215755532 215755560 -34932294 + AT_rich Low_complexity Low_complexity 1 28 0 2320 50 0 0 chr2 215755857 215756185 -34931669 - AluY SINE Alu 0 329 2 22 0 0 0 chr2 215756233 215756255 -34931599 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 215756454 215756483 -34931371 + AT_rich Low_complexity Low_complexity 1 29 0 185 121 103 69 chr2 215757813 215757871 -34929983 - L2 LINE L2 -588 2726 2667 211 308 55 44 chr2 215758508 215758599 -34929255 - MIR SINE MIR -125 137 46 528 286 48 21 chr2 215759979 215760168 -34927686 - L2 LINE L2 0 3313 3120 354 369 87 10 chr2 215760263 215760458 -34927396 - L2 LINE L2 -337 2977 2768 22 0 0 0 chr2 215761239 215761261 -34926593 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 215761313 215761337 -34926517 + AT_rich Low_complexity Low_complexity 1 24 0 236 265 0 0 chr2 215761494 215761543 -34926311 + Alu SINE Alu 139 187 -116 967 205 39 44 chr2 215761543 215761748 -34926106 + AluJo SINE Alu 72 275 -37 180 0 0 0 chr2 215761748 215761768 -34926086 + (TC)n Simple_repeat Simple_repeat 2 21 0 513 89 73 0 chr2 215761768 215761892 -34925962 + (TA)n Simple_repeat Simple_repeat 1 133 0 21 0 0 0 chr2 215762169 215762190 -34925664 + AT_rich Low_complexity Low_complexity 1 21 0 447 41 58 41 chr2 215762853 215762974 -34924880 + (TA)n Simple_repeat Simple_repeat 1 123 0 886 242 47 9 chr2 215763237 215763452 -34924402 - MER58A DNA MER1_type -1 223 1 26 30 0 0 chr2 215765226 215765259 -34922595 + AT_rich Low_complexity Low_complexity 1 33 0 30 45 0 0 chr2 215765825 215765869 -34921985 + AT_rich Low_complexity Low_complexity 1 44 0 299 161 89 0 chr2 215767396 215767452 -34920402 + MIR SINE MIR 90 150 -58 247 377 25 33 chr2 215767700 215767822 -34920032 - L2 LINE L2 -8 3264 3144 699 310 245 22 chr2 215769486 215770077 -34917777 + L2 LINE L2 2139 2861 -453 309 322 22 0 chr2 215770241 215770331 -34917523 + L2 LINE L2 3172 3263 -9 24 32 0 0 chr2 215771623 215771654 -34916200 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr2 215771757 215771792 -34916062 + AT_rich Low_complexity Low_complexity 1 35 0 419 243 331 0 chr2 215774859 215774995 -34912859 + MER5A DNA MER1_type 7 187 -2 1120 244 68 48 chr2 215775392 215775850 -34912004 - MLT1C LTR MaLR 0 467 1 269 207 103 0 chr2 215776119 215776177 -34911677 + L2 LINE L2 3187 3250 -22 23 54 0 0 chr2 215776487 215776524 -34911330 + AT_rich Low_complexity Low_complexity 1 37 0 1019 236 160 44 chr2 215776582 215776848 -34911006 - Charlie7 DNA MER1_type -1936 676 442 2086 122 0 0 chr2 215776848 215777175 -34910679 - AluSq SINE Alu 0 327 1 1019 236 160 44 chr2 215777175 215777470 -34910384 - Charlie7 DNA MER1_type -2170 442 48 698 260 89 38 chr2 215778145 215778572 -34909282 + LTR33 LTR ERVL 11 459 -62 24 0 0 0 chr2 215779841 215779865 -34907989 + AT_rich Low_complexity Low_complexity 1 24 0 30 27 0 0 chr2 215780609 215780646 -34907208 + AT_rich Low_complexity Low_complexity 1 37 0 2420 72 3 0 chr2 215780803 215781110 -34906744 + AluY SINE Alu 1 308 -3 2081 103 0 7 chr2 215781286 215781567 -34906287 - AluSx SINE Alu -30 282 4 1912 184 14 19 chr2 215781759 215782129 -34905725 - MLT1A2 LTR MaLR 0 374 7 580 278 8 0 chr2 215782138 215782264 -34905590 - MIR SINE MIR -79 183 57 21 0 0 0 chr2 215782613 215782634 -34905220 + AT_rich Low_complexity Low_complexity 1 21 0 191 337 82 10 chr2 215782844 215782942 -34904912 - MIR SINE MIR -26 236 132 449 306 27 49 chr2 215783207 215783390 -34904464 - MIR3 SINE MIR -3 205 27 216 171 0 0 chr2 215783898 215783933 -34903921 + (CA)n Simple_repeat Simple_repeat 2 36 0 217 302 130 35 chr2 215783997 215784166 -34903688 - MIR SINE MIR 0 262 78 387 292 15 56 chr2 215784486 215784681 -34903173 + MIR SINE MIR 56 242 -20 525 279 0 51 chr2 215785770 215785928 -34901926 + MIR SINE MIR 85 234 -28 852 286 32 12 chr2 215786052 215786304 -34901550 + MIR SINE MIR 5 261 -1 374 141 28 0 chr2 215787484 215787555 -34900299 + CT-rich Low_complexity Low_complexity 4 76 0 2128 118 0 0 chr2 215787693 215787982 -34899872 - AluSx SINE Alu -23 289 1 601 236 60 30 chr2 215788149 215788348 -34899506 - MER3 DNA MER1_type 0 209 5 2078 107 24 0 chr2 215788393 215788682 -34899172 - AluSp SINE Alu -17 296 1 201 213 0 0 chr2 215789917 215789964 -34897890 + (CA)n Simple_repeat Simple_repeat 1 47 0 280 235 17 130 chr2 215792026 215792141 -34895713 - MIR3 SINE MIR -8 200 99 372 247 22 0 chr2 215793310 215793399 -34894455 + MIR SINE MIR 87 177 -85 209 345 104 43 chr2 215793808 215794315 -34893539 + L2 LINE L2 2224 2761 -553 971 241 39 4 chr2 215794640 215794872 -34892982 + MIR SINE MIR 2 241 -21 2469 59 3 3 chr2 215795247 215795553 -34892301 - AluY SINE Alu -5 306 1 714 357 67 16 chr2 215795980 215796355 -34891499 - L3 LINE CR1 -11 1566 1173 24 67 0 0 chr2 215796355 215796400 -34891454 + AT_rich Low_complexity Low_complexity 1 45 0 378 380 67 10 chr2 215796735 215796943 -34890911 + MIR SINE MIR 37 256 -6 224 163 20 0 chr2 215797392 215797441 -34890413 + (TA)n Simple_repeat Simple_repeat 2 51 0 459 321 186 36 chr2 215797860 215798393 -34889461 + L2 LINE L2 2659 3267 -5 360 237 9 87 chr2 215799018 215799133 -34888721 - L1MA9 LINE L1 -18 6273 6169 24 0 0 0 chr2 215800504 215800528 -34887326 + AT_rich Low_complexity Low_complexity 1 24 0 348 195 52 18 chr2 215804155 215804271 -34883583 + L1MD3 LINE L1 7897 7995 0 23 0 0 0 chr2 215804326 215804349 -34883505 + AT_rich Low_complexity Low_complexity 1 23 0 1637 174 3 26 chr2 215804648 215804952 -34882902 + AluJb SINE Alu 1 297 -15 656 286 104 22 chr2 215805140 215805371 -34882483 + MIR SINE MIR 12 261 -1 23 54 0 0 chr2 215806700 215806737 -34881117 + AT_rich Low_complexity Low_complexity 1 37 0 252 0 0 0 chr2 215807471 215807499 -34880355 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 235 307 13 0 chr2 215807771 215807846 -34880008 + CT-rich Low_complexity Low_complexity 3 78 0 254 257 69 40 chr2 215807848 215807949 -34879905 - MLT1K LTR MaLR -162 426 323 745 280 219 14 chr2 215808034 215808395 -34879459 - LTR16A LTR ERVL 0 450 16 248 322 107 0 chr2 215809513 215809634 -34878220 - MIR SINE MIR -17 245 112 1026 204 5 5 chr2 215810311 215810507 -34877347 + AluJo SINE Alu 87 282 -30 24 0 0 0 chr2 215810507 215810531 -34877323 + AT_rich Low_complexity Low_complexity 1 24 0 373 75 0 0 chr2 215811258 215811311 -34876543 + Alu SINE Alu 1 53 -248 2021 115 0 0 chr2 215811343 215811621 -34876233 + AluSg SINE Alu 1 278 -32 194 0 39 0 chr2 215811621 215811647 -34876207 + (CAAA)n Simple_repeat Simple_repeat 4 30 0 371 237 160 67 chr2 215812936 215813130 -34874724 + L2 LINE L2 3102 3313 0 1862 136 24 3 chr2 215813168 215813455 -34874399 - AluSc SINE Alu -16 293 1 30448 114 15 60 chr2 215814931 215821374 -34866480 + L1PA7 LINE L1 12 6152 -2 2022 117 7 0 chr2 215821374 215821664 -34866190 + MER41A LTR ERV1 177 468 -86 4256 85 3 0 chr2 215821987 215822563 -34865291 + L1P3 LINE L1 673 1250 -5211 264 348 82 0 chr2 215822571 215822706 -34865148 + MIR SINE MIR 101 246 -16 196 321 101 18 chr2 215823121 215823230 -34864624 - L2 LINE L2 -17 3255 3138 1217 171 103 39 chr2 215823733 215824014 -34863840 - AluJo SINE Alu -2 300 2 1091 233 48 61 chr2 215824048 215824425 -34863429 + MLT1B LTR MaLR 1 372 -18 1890 161 73 59 chr2 215824427 215824849 -34863005 - MSTA LTR MaLR 0 428 1 9023 183 19 11 chr2 215824851 215826476 -34861378 - MSTA-int LTR MaLR -2 1649 11 1892 161 61 89 chr2 215826480 215826920 -34860934 - MSTA LTR MaLR 0 428 1 192 328 0 60 chr2 215827339 215827455 -34860399 + L2 LINE L2 2944 3052 -261 1703 168 31 10 chr2 215827695 215827987 -34859867 + AluJb SINE Alu 1 298 -14 4981 165 27 30 chr2 215828907 215829924 -34857930 - L1MA9 LINE L1 -32 6280 5260 1870 164 3 3 chr2 215829924 215830234 -34857620 - AluJb SINE Alu -2 310 1 4981 165 27 30 chr2 215830234 215830605 -34857249 - L1MA9 LINE L1 -1052 5260 4889 1382 131 0 5 chr2 215830848 215831047 -34856807 + AluSg/x SINE Alu 101 298 -12 500 151 19 19 chr2 215831577 215831683 -34856171 - L1MB3 LINE L1 -3 6180 6075 1703 207 61 101 chr2 215832091 215832623 -34855231 - MER119 DNA MER1_type -7 576 69 2084 154 0 0 chr2 215832623 215832934 -34854920 + AluJb SINE Alu 1 311 -1 1703 207 61 101 chr2 215832934 215832994 -34854860 - MER119 DNA MER1_type -514 69 8 1094 197 128 43 chr2 215833788 215834133 -34853721 - MLT1A2 LTR MaLR 0 374 1 21 36 0 0 chr2 215834304 215834332 -34853522 + AT_rich Low_complexity Low_complexity 1 28 0 182 361 0 14 chr2 215834417 215834489 -34853365 - L2 LINE L2 -1870 1444 1374 252 0 0 0 chr2 215835518 215835546 -34852308 + (CA)n Simple_repeat Simple_repeat 1 28 0 380 219 134 0 chr2 215836766 215836912 -34850942 + HsTC2 DNA Tc2 4 1898 0 611 315 17 4 chr2 215837209 215837441 -34850413 - L1ME4a LINE L1 -290 5831 5597 1638 172 7 17 chr2 215838512 215838803 -34849051 - AluJo SINE Alu -22 290 3 359 183 65 0 chr2 215839143 215839236 -34848618 + L1MA5 LINE L1 6193 6291 -9 227 241 0 17 chr2 215839240 215839298 -34848556 + MIR SINE MIR 193 249 -13 426 20 0 0 chr2 215839490 215839541 -34848313 + (CA)n Simple_repeat Simple_repeat 2 52 0 27 49 0 0 chr2 215839541 215839582 -34848272 + AT_rich Low_complexity Low_complexity 1 41 0 1442 209 14 30 chr2 215839582 215839878 -34847976 - AluJo SINE Alu -19 293 3 1912 154 38 27 chr2 215842263 215842634 -34845220 - THE1C LTR MaLR 0 375 1 1760 188 0 25 chr2 215842709 215843028 -34844826 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 215843521 215843542 -34844312 + AT_rich Low_complexity Low_complexity 1 21 0 3076 161 49 16 chr2 215845987 215846559 -34841295 - MER67C LTR ERV1 0 710 120 192 125 0 0 chr2 215847494 215847526 -34840328 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 235 241 195 11 chr2 215848072 215848159 -34839695 - L2 LINE L2 0 3272 3170 25 0 0 0 chr2 215848487 215848512 -34839342 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr2 215848784 215848812 -34839042 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 215849635 215849657 -34838197 + (TTTTTG)n Simple_repeat Simple_repeat 4 25 0 186 103 0 0 chr2 215851249 215851278 -34836576 + (T)n Simple_repeat Simple_repeat 1 29 0 370 368 7 7 chr2 215851865 215852017 -34835837 + MIR3 SINE MIR 34 185 -23 183 167 0 0 chr2 215853410 215853452 -34834402 + T-rich Low_complexity Low_complexity 1 42 0 646 217 60 32 chr2 215854143 215854360 -34833494 + L2 LINE L2 3091 3313 0 998 176 39 0 chr2 215854635 215854817 -34833037 + MER5A DNA MER1_type 1 189 0 242 247 0 43 chr2 215855643 215855736 -34832118 + L1MC4 LINE L1 6614 6702 -1340 329 303 0 0 chr2 215855747 215855836 -34832018 + L1MC4 LINE L1 6614 6702 -1340 198 103 0 0 chr2 215855861 215855890 -34831964 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 1080 313 40 14 chr2 215856992 215857363 -34830491 - MLT1J LTR MaLR -130 381 1 274 383 72 9 chr2 215857604 215857826 -34830028 - MIR SINE MIR -26 236 1 217 171 24 0 chr2 215858114 215858155 -34829699 + GA-rich Low_complexity Low_complexity 3 44 0 1878 177 3 0 chr2 215858890 215859200 -34828654 + AluJb SINE Alu 1 311 -1 665 317 17 13 chr2 215859300 215859530 -34828324 - MIR SINE MIR -26 236 6 23 0 0 0 chr2 215860052 215860075 -34827779 + AT_rich Low_complexity Low_complexity 1 23 0 2177 100 14 0 chr2 215860075 215860364 -34827490 - AluSq SINE Alu -8 305 13 337 250 30 38 chr2 215860407 215860539 -34827315 - L1ME4a LINE L1 -30 6091 5961 529 322 94 9 chr2 215861105 215861338 -34826516 - MIR SINE MIR 0 262 10 1578 156 14 71 chr2 215861820 215862185 -34825669 - L1MB8 LINE L1 0 6178 5835 24 0 0 0 chr2 215862743 215862767 -34825087 + AT_rich Low_complexity Low_complexity 1 24 0 1256 168 11 50 chr2 215863279 215863541 -34824313 - MER4B-int LTR ERV1 -1421 5337 5086 366 107 0 36 chr2 215863546 215863602 -34824252 - LTR47A LTR ERVL -120 332 279 1546 150 0 52 chr2 215863949 215864236 -34823618 + Tigger1 DNA MER2_type 1 272 -2146 211 212 242 0 chr2 215864927 215864993 -34822861 - MIR SINE MIR -152 110 29 24 0 0 0 chr2 215865766 215865790 -34822064 + AT_rich Low_complexity Low_complexity 1 24 0 1869 150 13 13 chr2 215866750 215867057 -34820797 + AluJb SINE Alu 2 308 -4 2433 84 3 0 chr2 215867285 215867594 -34820260 + AluSg SINE Alu 1 310 0 14475 138 23 16 chr2 215867777 215867968 -34819886 - Tigger1 DNA MER2_type 0 2418 2230 2205 108 3 3 chr2 215867968 215868264 -34819590 - AluSx SINE Alu -16 296 1 14475 138 23 16 chr2 215868264 215870469 -34817385 - Tigger1 DNA MER2_type -188 2230 4 2396 80 0 13 chr2 215870881 215871181 -34816673 + AluY SINE Alu 1 296 -15 237 254 51 0 chr2 215871498 215871557 -34816297 + MIR SINE MIR 85 146 -62 21 36 0 0 chr2 215872315 215872343 -34815511 + AT_rich Low_complexity Low_complexity 1 28 0 2483 67 0 10 chr2 215872792 215873106 -34814748 + AluY SINE Alu 1 311 0 306 292 8 8 chr2 215873140 215873260 -34814594 + (TA)n Simple_repeat Simple_repeat 2 121 0 192 340 149 11 chr2 215873412 215873506 -34814348 + MIR SINE MIR 33 139 -69 828 199 31 31 chr2 215874511 215874702 -34813152 + MIR SINE MIR 29 219 -43 1899 138 29 57 chr2 215875532 215875916 -34811938 + THE1C LTR MaLR 1 373 -2 350 303 133 51 chr2 215875952 215876186 -34811668 - MLT1L LTR MaLR -193 422 170 205 332 262 10 chr2 215878713 215878915 -34808939 - MIR SINE MIR -7 255 3 25 31 0 0 chr2 215879328 215879360 -34808494 + AT_rich Low_complexity Low_complexity 1 32 0 2329 99 0 0 chr2 215879514 215879817 -34808037 + AluSg SINE Alu 1 303 -7 2436 69 0 0 chr2 215879941 215880244 -34807610 - AluY SINE Alu -8 303 1 647 225 65 50 chr2 215880757 215880957 -34806897 + MER63A DNA MER1_type 2 204 -6 1180 165 165 34 chr2 215881439 215881705 -34806149 + AluJb SINE Alu 1 301 -1 297 122 51 10 chr2 215881807 215881905 -34805949 + (TA)n Simple_repeat Simple_repeat 1 102 0 2001 150 3 10 chr2 215882963 215883277 -34804577 - AluJo SINE Alu 0 312 1 644 262 65 0 chr2 215883305 215883473 -34804381 + MIR SINE MIR 63 241 -21 23 0 0 0 chr2 215883592 215883615 -34804239 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 215883882 215883921 -34803933 + AT_rich Low_complexity Low_complexity 1 39 0 1088 253 113 98 chr2 215884918 215885111 -34802743 - L1MC4 LINE L1 0 8042 7853 2251 116 3 0 chr2 215885111 215885422 -34802432 - AluSx SINE Alu 0 312 1 1088 253 113 98 chr2 215885422 215886287 -34801567 - L1MC4 LINE L1 -189 7853 6959 2063 117 0 54 chr2 215886287 215886603 -34801251 + AluSx SINE Alu 3 301 -11 1088 253 113 98 chr2 215886603 215886838 -34801016 - L1MC4 LINE L1 -1083 6959 6729 1008 227 0 5 chr2 215887412 215887628 -34800226 - AluJo SINE Alu -11 301 87 685 243 109 14 chr2 215888358 215888568 -34799286 + MIR SINE MIR 33 262 0 22 0 0 0 chr2 215889067 215889089 -34798765 + AT_rich Low_complexity Low_complexity 1 22 0 2030 138 7 0 chr2 215889353 215889644 -34798210 + AluSx SINE Alu 6 298 -14 542 281 12 30 chr2 215890151 215890251 -34797603 + MIR SINE MIR 98 195 -67 564 92 0 0 chr2 215890251 215890327 -34797527 - MADE1 DNA Mariner -3 77 2 542 281 12 30 chr2 215890327 215890393 -34797461 + MIR SINE MIR 195 261 -1 404 236 49 56 chr2 215891339 215891483 -34796371 + MER5A DNA MER1_type 7 149 -40 243 0 0 0 chr2 215891490 215891517 -34796337 + (A)n Simple_repeat Simple_repeat 1 27 0 1810 180 3 10 chr2 215892146 215892451 -34795403 - AluJo SINE Alu -7 305 3 21 36 0 0 chr2 215895776 215895804 -34792050 + AT_rich Low_complexity Low_complexity 1 28 0 748 305 67 32 chr2 215896281 215896566 -34791288 - L2 LINE L2 -8 3305 3011 440 250 92 0 chr2 215897277 215897397 -34790457 + MIR SINE MIR 47 177 -85 357 231 140 42 chr2 215898229 215898372 -34789482 - L1ME3 LINE L1 -84 6078 5922 558 205 0 1 chr2 215898378 215898490 -34789364 - L1ME3 LINE L1 -549 5617 5507 2368 100 10 0 chr2 215900176 215900527 -34787327 - AluSx SINE Alu 0 354 1 1951 184 26 3 chr2 215900552 215900938 -34786916 - L1MB7 LINE L1 -17 6167 5773 354 111 0 74 chr2 215900957 215901038 -34786816 - L1MA7 LINE L1 -3 6288 6214 1505 197 38 80 chr2 215901038 215901366 -34786488 - L1MA9 LINE L1 -216 6096 5789 282 29 0 0 chr2 215901366 215901401 -34786453 + (CA)n Simple_repeat Simple_repeat 2 36 0 1505 197 38 80 chr2 215901401 215901498 -34786356 - L1MA9 LINE L1 -523 5789 5689 236 182 30 0 chr2 215901554 215901620 -34786234 - MER116 DNA Mariner 0 80 13 28 29 0 0 chr2 215901947 215901982 -34785872 + AT_rich Low_complexity Low_complexity 1 35 0 2554 52 7 0 chr2 215902173 215902478 -34785376 + AluY SINE Alu 1 307 -4 650 293 99 14 chr2 215902627 215902921 -34784933 - L2 LINE L2 0 3313 2995 26 0 0 0 chr2 215903167 215903193 -34784661 + AT_rich Low_complexity Low_complexity 1 26 0 2138 98 11 21 chr2 215903195 215903480 -34784374 - AluSx SINE Alu -30 282 1 529 322 94 9 chr2 216106085 216106318 -34581536 + MIR SINE MIR 10 262 0 567 224 178 13 chr2 216107235 216107387 -34580467 + MER5A DNA MER1_type 10 186 -3 195 365 0 0 chr2 216107389 216107452 -34580402 + L2 LINE L2 2636 2698 -616 225 274 0 16 chr2 216107455 216107517 -34580337 + L2 LINE L2 3159 3219 -94 218 254 218 9 chr2 216108034 216108144 -34579710 + MIR SINE MIR 109 241 -21 324 217 36 65 chr2 216108506 216108644 -34579210 + L1ME4a LINE L1 5982 6115 -6 368 331 40 57 chr2 216108894 216109069 -34578785 + MIR SINE MIR 10 181 -81 203 0 0 36 chr2 216109971 216109999 -34577855 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 498 315 18 22 chr2 216111710 216111916 -34575938 + MIR SINE MIR 6 212 -50 2376 82 0 0 chr2 216112049 216112342 -34575512 + AluSq SINE Alu 1 293 -20 21 0 0 0 chr2 216112345 216112366 -34575488 + AT_rich Low_complexity Low_complexity 1 21 0 5767 138 15 7 chr2 216112942 216114077 -34573777 + L1PB4 LINE L1 5006 6154 -2 1833 157 25 3 chr2 216114336 216114622 -34573232 - AluJb SINE Alu -20 292 1 216 189 0 0 chr2 216115986 216116023 -34571831 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr2 216116288 216116309 -34571545 + AT_rich Low_complexity Low_complexity 1 21 0 840 175 31 6 chr2 216116386 216116546 -34571308 - MER119 DNA MER1_type -192 391 228 519 30 0 0 chr2 216116794 216116860 -34570994 + L1PA6 LINE L1 6089 6154 0 329 267 158 0 chr2 216117754 216117874 -34569980 + MIR SINE MIR 122 260 -2 1659 193 120 10 chr2 216118509 216118918 -34568936 - L1MC3 LINE L1 -8 7777 7324 1331 172 97 38 chr2 216120018 216120308 -34567546 + AluJo SINE Alu 3 309 -3 1487 93 5 0 chr2 216120597 216120790 -34567064 - AluSg SINE Alu -116 194 1 1865 156 10 13 chr2 216121016 216121324 -34566530 - AluJb SINE Alu -4 308 2 24 0 0 0 chr2 216122284 216122308 -34565546 + AT_rich Low_complexity Low_complexity 1 24 0 211 212 242 0 chr2 216123082 216123148 -34564706 + MIR SINE MIR 29 110 -152 1546 150 0 52 chr2 216123839 216124126 -34563728 - Tigger1 DNA MER2_type -2146 272 1 366 107 0 36 chr2 216124473 216124529 -34563325 + LTR47A LTR ERVL 279 332 -120 1256 168 11 50 chr2 216124534 216124796 -34563058 + MER4B-int LTR ERV1 5086 5337 -1421 24 0 0 0 chr2 216125308 216125332 -34562522 + AT_rich Low_complexity Low_complexity 1 24 0 1524 156 16 74 chr2 216125890 216126255 -34561599 + L1MB8 LINE L1 5835 6178 0 1359 99 0 0 chr2 216126268 216126439 -34561415 + AluSx SINE Alu 1 171 -141 2740 116 34 2 chr2 216127152 216127565 -34560289 + MSTA LTR MaLR 1 426 -2 207 0 0 0 chr2 216127657 216127680 -34560174 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1740 174 6 37 chr2 216128237 216128559 -34559295 - AluJb SINE Alu 0 312 1 601 160 0 0 chr2 216129772 216129872 -34557982 - AluSg/x SINE Alu -10 299 200 315 327 27 18 chr2 216130334 216130444 -34557410 + MER5A DNA MER1_type 79 189 0 1248 231 64 10 chr2 216132008 216132303 -34555551 - AluJo SINE Alu -1 311 1 248 309 47 25 chr2 216132847 216132994 -34554860 + MIR SINE MIR 28 176 -32 21 0 0 0 chr2 216133034 216133055 -34554799 + AT_rich Low_complexity Low_complexity 1 21 0 2372 62 0 0 chr2 216133743 216134032 -34553822 + AluY SINE Alu 3 291 -20 2542 36 3 10 chr2 216134370 216134678 -34553176 - AluY SINE Alu -5 306 1 2294 48 0 37 chr2 216134685 216135018 -34552836 - AluY SINE Alu 0 322 1 21 71 0 0 chr2 216136631 216136673 -34551181 + AT_rich Low_complexity Low_complexity 1 42 0 207 100 0 0 chr2 216136928 216136958 -34550896 + (TA)n Simple_repeat Simple_repeat 2 31 0 2110 133 7 0 chr2 216138242 216138542 -34549312 + AluSx SINE Alu 1 302 -10 2193 92 3 26 chr2 216138661 216138966 -34548888 + AluSc SINE Alu 12 309 0 22 56 0 0 chr2 216140810 216140846 -34547008 + AT_rich Low_complexity Low_complexity 1 36 0 443 291 0 57 chr2 216142243 216142384 -34545470 + L3 LINE CR1 1432 1564 -13 557 289 53 16 chr2 216142804 216142991 -34544863 + L2 LINE L2 3078 3271 -1 21 0 0 0 chr2 216143359 216143380 -34544474 + AT_rich Low_complexity Low_complexity 1 21 0 475 159 0 0 chr2 216143608 216143677 -34544177 + AluJ/FLAM SINE Alu 2 70 -242 279 395 25 32 chr2 216143876 216144033 -34543821 - L2 LINE L2 -6 3266 3111 22 94 0 0 chr2 216144889 216144953 -34542901 + AT_rich Low_complexity Low_complexity 1 64 0 654 165 0 0 chr2 216145207 216145334 -34542520 + (CTTAT)n Simple_repeat Simple_repeat 5 131 0 1930 153 0 0 chr2 216145335 216145616 -34542238 - AluSx SINE Alu -31 281 1 197 65 32 0 chr2 216146197 216146228 -34541626 + (TA)n Simple_repeat Simple_repeat 1 32 0 1076 153 5 54 chr2 216147663 216147885 -34539969 - AluJo SINE Alu -14 298 88 850 279 154 21 chr2 216148086 216148462 -34539392 + MLT1J2 LTR MaLR 1 426 -24 270 0 0 0 chr2 216151739 216151769 -34536085 + (T)n Simple_repeat Simple_repeat 1 30 0 252 0 0 0 chr2 216152616 216152644 -34535210 + (T)n Simple_repeat Simple_repeat 1 28 0 200 161 107 36 chr2 216154835 216154891 -34532963 - L2 LINE L2 -51 3262 3203 * 548 348 73 26 chr2 216154885 216155187 -34532667 - L2 LINE L2 -463 2851 2536 1907 64 4 4 chr2 216155333 216155567 -34532287 - AluSg SINE Alu -76 234 1 212 280 10 60 chr2 216155891 216155991 -34531863 + L2 LINE L2 3218 3312 -1 326 281 87 0 chr2 216156043 216156166 -34531688 + MIR SINE MIR 3 147 -65 257 281 43 0 chr2 216156881 216156987 -34530867 + L1ME3A LINE L1 5827 5938 -232 1970 123 11 3 chr2 216157232 216157516 -34530338 - AluSg SINE Alu -24 286 1 21 0 0 0 chr2 216157516 216157537 -34530317 + AT_rich Low_complexity Low_complexity 1 21 0 490 279 0 52 chr2 216158082 216158236 -34529618 + MIR SINE MIR 109 254 -8 195 176 0 39 chr2 216159636 216159687 -34528167 - MIR SINE MIR -32 230 182 21 57 0 0 chr2 216160279 216160314 -34527540 + AT_rich Low_complexity Low_complexity 1 35 0 865 265 9 14 chr2 216160314 216160525 -34527329 + MER58A DNA MER1_type 4 213 -11 679 247 79 0 chr2 216161076 216161254 -34526600 - MIR SINE MIR 0 262 71 14450 138 23 16 chr2 216161906 216162097 -34525757 - Tigger1 DNA MER2_type 0 2418 2230 2172 108 3 3 chr2 216162097 216162393 -34525461 - AluSx SINE Alu -16 296 1 14450 138 23 16 chr2 216162393 216164598 -34523256 - Tigger1 DNA MER2_type -188 2230 4 2362 80 0 13 chr2 216165010 216165310 -34522544 + AluY SINE Alu 1 296 -15 235 254 51 0 chr2 216165627 216165686 -34522168 + MIR SINE MIR 85 146 -62 21 36 0 0 chr2 216166444 216166472 -34521382 + AT_rich Low_complexity Low_complexity 1 28 0 2445 67 0 10 chr2 216166921 216167235 -34520619 + AluY SINE Alu 1 311 0 306 292 8 8 chr2 216167269 216167389 -34520465 + (TA)n Simple_repeat Simple_repeat 2 121 0 192 340 149 11 chr2 216167541 216167635 -34520219 + MIR SINE MIR 33 139 -69 185 261 0 0 chr2 216168353 216168399 -34519455 - MER5C DNA MER1_type -124 200 155 825 199 31 31 chr2 216168641 216168832 -34519022 + MIR SINE MIR 29 219 -43 1878 138 29 57 chr2 216169662 216170046 -34517808 + THE1C LTR MaLR 1 373 -2 358 312 128 47 chr2 216170082 216170316 -34517538 - MLT1L LTR MaLR -193 422 170 209 332 262 10 chr2 216172843 216173045 -34514809 - MIR SINE MIR -7 255 3 25 31 0 0 chr2 216173458 216173490 -34514364 + AT_rich Low_complexity Low_complexity 1 32 0 449 63 0 0 chr2 216173644 216173707 -34514147 + Alu SINE Alu 1 63 -255 644 230 65 50 chr2 216173998 216174198 -34513656 + MER63A DNA MER1_type 2 204 -6 1160 165 165 34 chr2 216174680 216174946 -34512908 + AluJb SINE Alu 1 301 -1 297 122 51 10 chr2 216175048 216175146 -34512708 + (TA)n Simple_repeat Simple_repeat 1 102 0 1948 153 3 10 chr2 216176204 216176518 -34511336 - AluJo SINE Alu 0 312 1 643 262 65 0 chr2 216176546 216176714 -34511140 + MIR SINE MIR 63 241 -21 23 0 0 0 chr2 216176833 216176856 -34510998 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 216177123 216177162 -34510692 + AT_rich Low_complexity Low_complexity 1 39 0 1140 255 113 98 chr2 216178159 216178352 -34509502 - L1MC4 LINE L1 0 8042 7853 2217 116 3 0 chr2 216178352 216178663 -34509191 - AluSx SINE Alu 0 312 1 1140 255 113 98 chr2 216178663 216179528 -34508326 - L1MC4 LINE L1 -189 7853 6959 2021 116 0 60 chr2 216179528 216179846 -34508008 + AluSx SINE Alu 3 301 -11 1140 255 113 98 chr2 216179846 216180081 -34507773 - L1MC4 LINE L1 -1083 6959 6729 982 228 0 5 chr2 216180655 216180870 -34506984 - AluJo SINE Alu -12 300 87 685 243 109 14 chr2 216181600 216181810 -34506044 + MIR SINE MIR 33 262 0 22 0 0 0 chr2 216182309 216182331 -34505523 + AT_rich Low_complexity Low_complexity 1 22 0 2001 138 7 0 chr2 216182596 216182887 -34504967 + AluSx SINE Alu 6 298 -14 546 281 12 30 chr2 216183394 216183494 -34504360 + MIR SINE MIR 98 195 -67 563 92 0 0 chr2 216183494 216183570 -34504284 - MADE1 DNA Mariner -3 77 2 546 281 12 30 chr2 216183570 216183636 -34504218 + MIR SINE MIR 195 261 -1 399 236 49 56 chr2 216184581 216184725 -34503129 + MER5A DNA MER1_type 7 149 -40 234 0 0 0 chr2 216184732 216184758 -34503096 + (A)n Simple_repeat Simple_repeat 1 26 0 1793 180 3 10 chr2 216185388 216185693 -34502161 - AluJo SINE Alu -7 305 3 21 36 0 0 chr2 216189018 216189046 -34498808 + AT_rich Low_complexity Low_complexity 1 28 0 748 305 67 32 chr2 216189523 216189808 -34498046 - L2 LINE L2 -8 3305 3011 433 250 92 0 chr2 216190519 216190639 -34497215 + MIR SINE MIR 47 177 -85 360 231 140 42 chr2 216191471 216191614 -34496240 - L1ME3 LINE L1 -84 6078 5922 563 205 0 1 chr2 216191620 216191732 -34496122 - L1ME3 LINE L1 -549 5617 5507 1248 116 17 0 chr2 216193505 216193686 -34494168 + AluSq SINE Alu 122 305 -8 23 0 0 0 chr2 216193686 216193709 -34494145 + AT_rich Low_complexity Low_complexity 1 23 0 669 317 17 13 chr2 216194231 216194461 -34493393 + MIR SINE MIR 6 236 -26 1878 174 3 0 chr2 216194561 216194871 -34492983 - AluJb SINE Alu -1 311 1 217 171 24 0 chr2 216195606 216195647 -34492207 + CT-rich Low_complexity Low_complexity 3 44 0 283 383 72 9 chr2 216195935 216196157 -34491697 + MIR SINE MIR 1 236 -26 1083 313 40 14 chr2 216196398 216196769 -34491085 + MLT1J LTR MaLR 1 381 -130 265 253 23 0 chr2 216197877 216197964 -34489890 - L1MC4 LINE L1 -1340 6702 6614 984 176 39 0 chr2 216198784 216198966 -34488888 - MER5A DNA MER1_type 0 189 1 655 217 60 32 chr2 216199241 216199458 -34488396 - L2 LINE L2 0 3313 3091 183 167 0 0 chr2 216200150 216200192 -34487662 + A-rich Low_complexity Low_complexity 1 42 0 373 368 7 7 chr2 216201585 216201737 -34486117 - MIR3 SINE MIR -23 185 34 186 103 0 0 chr2 216202324 216202353 -34485501 + (A)n Simple_repeat Simple_repeat 1 29 0 198 0 0 0 chr2 216203945 216203967 -34483887 + (CAAAAA)n Simple_repeat Simple_repeat 4 25 0 21 36 0 0 chr2 216204790 216204818 -34483036 + AT_rich Low_complexity Low_complexity 1 28 0 234 241 195 11 chr2 216205443 216205530 -34482324 + L2 LINE L2 3170 3272 0 192 125 0 0 chr2 216206076 216206108 -34481746 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 3063 163 49 16 chr2 216207040 216207612 -34480242 + MER67C LTR ERV1 120 710 0 21 0 0 0 chr2 216210057 216210078 -34477776 + AT_rich Low_complexity Low_complexity 1 21 0 1736 188 0 25 chr2 216210571 216210890 -34476964 + AluJb SINE Alu 1 311 -1 1886 154 38 27 chr2 216210965 216211336 -34476518 + THE1C LTR MaLR 1 375 0 1421 209 14 30 chr2 216213721 216214017 -34473837 + AluJo SINE Alu 3 293 -19 27 49 0 0 chr2 216214017 216214058 -34473796 + AT_rich Low_complexity Low_complexity 1 41 0 390 21 0 0 chr2 216214058 216214105 -34473749 + (TG)n Simple_repeat Simple_repeat 2 48 0 228 241 0 17 chr2 216214297 216214355 -34473499 - MIR SINE MIR -13 249 193 369 183 65 0 chr2 216214359 216214452 -34473402 - L1MA5 LINE L1 -9 6291 6193 182 260 123 14 chr2 216214505 216214578 -34473276 - MIR SINE MIR -64 198 118 1560 179 7 17 chr2 216214792 216215083 -34472771 + AluJo SINE Alu 3 290 -22 1194 152 0 0 chr2 216216040 216216211 -34471643 - AluSx SINE Alu -141 171 1 36 40 0 0 chr2 216217458 216217508 -34470346 + AT_rich Low_complexity Low_complexity 1 50 0 4703 139 19 11 chr2 216217700 216218526 -34469328 - L1MA8 LINE L1 -3 6288 5456 222 242 16 16 chr2 216218879 216218941 -34468913 + CT-rich Low_complexity Low_complexity 4 65 0 738 184 63 53 chr2 216219314 216219522 -34468332 + MLT1B LTR MaLR 3 205 -169 1315 147 101 62 chr2 216219525 216219832 -34468022 + MER31B LTR ERV1 4 322 -144 2022 156 149 44 chr2 216219833 216220269 -34467585 + MER39B LTR ERV1 1 482 -171 249 192 19 0 chr2 216220264 216220316 -34467538 + MLT1B LTR MaLR 338 390 0 * 286 336 77 45 chr2 216220730 216220838 -34467016 + MIR SINE MIR 20 123 -139 2556 186 23 53 chr2 216220838 216221492 -34466362 - LTR27 LTR ERV1 0 636 3 286 336 77 45 chr2 216221492 216221603 -34466251 + MIR SINE MIR 123 246 -16 252 77 0 0 chr2 216223841 216223880 -34463974 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 28 29 0 0 chr2 216225620 216225655 -34462199 + AT_rich Low_complexity Low_complexity 1 35 0 419 313 15 8 chr2 216225755 216225889 -34461965 - MER5A DNA MER1_type -6 183 49 313 331 21 35 chr2 216225773 216225918 -34461936 + MER5A DNA MER1_type 36 178 -11 * 457 325 98 24 chr2 216226710 216227146 -34460708 + L2 LINE L2 2728 3196 -76 210 347 13 0 chr2 216227287 216227362 -34460492 + MIR3 SINE MIR 108 183 -25 1802 168 96 17 chr2 216227382 216227798 -34460056 + L1MB7 LINE L1 5735 6183 -1 27 62 0 0 chr2 216227851 216227899 -34459955 + AT_rich Low_complexity Low_complexity 1 48 0 1240 161 9 9 chr2 216228617 216228828 -34459026 + AluJo SINE Alu 85 295 -17 196 269 15 60 chr2 216228929 216228996 -34458858 - MIR SINE MIR -151 111 48 1926 139 4 0 chr2 216229385 216229694 -34458160 + AluSq SINE Alu 1 310 0 21 36 0 0 chr2 216230130 216230158 -34457696 + AT_rich Low_complexity Low_complexity 1 28 0 719 219 43 6 chr2 216230588 216230752 -34457102 - AluJ SINE Alu -23 289 120 24 0 0 0 chr2 216235893 216235917 -34451937 + AT_rich Low_complexity Low_complexity 1 24 0 302 304 93 46 chr2 216235941 216236178 -34451676 - MIR SINE MIR 0 262 15 196 307 209 25 chr2 216237203 216237366 -34450488 - MIR SINE MIR -65 197 5 215 275 0 0 chr2 216237370 216237410 -34450444 - L2 LINE L2 -16 3256 3217 7808 17 1 0 chr2 216237754 216238711 -34449143 + L1PA3 LINE L1 5237 6194 0 276 314 7 46 chr2 216238724 216238815 -34449039 - L2 LINE L2 -2 3311 3227 2144 125 0 3 chr2 216238815 216239126 -34448728 + AluSg SINE Alu 1 310 0 276 314 7 46 chr2 216239126 216239187 -34448667 - L2 LINE L2 -86 3227 3165 416 367 83 15 chr2 216239417 216239744 -34448110 - L2 LINE L2 -471 2843 2495 381 159 0 14 chr2 216239860 216239929 -34447925 - MLT1J LTR MaLR -12 499 432 876 240 61 67 chr2 216239937 216240249 -34447605 - MLT1J LTR MaLR -201 310 1 5600 59 4 4 chr2 216241001 216241715 -34446139 - L1PA6 LINE L1 -2 6152 5439 910 172 80 0 chr2 216242965 216243128 -34444726 - AluJo SINE Alu -10 302 127 400 205 27 0 chr2 216243129 216243241 -34444613 + (TA)n Simple_repeat Simple_repeat 1 115 0 591 77 33 55 chr2 216243244 216243427 -34444427 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 270 136 0 0 chr2 216243441 216243485 -34444369 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 740 204 0 0 chr2 216243486 216243618 -34444236 - AluJo SINE Alu -169 133 2 35 24 0 0 chr2 216243756 216243798 -34444056 + AT_rich Low_complexity Low_complexity 1 42 0 712 287 80 108 chr2 216243852 216244626 -34443228 + HAL1 LINE L1 909 1660 -847 984 177 4 121 chr2 216244753 216245001 -34442853 + MER58A DNA MER1_type 4 222 -2 508 235 117 17 chr2 216245210 216245389 -34442465 + HAL1b LINE L1 746 942 -406 209 305 107 61 chr2 216245583 216245714 -34442140 - L2 LINE L2 -6 3307 3171 824 194 50 39 chr2 216245714 216245894 -34441960 - MER20 DNA MER1_type -10 209 28 294 390 21 27 chr2 216245906 216246038 -34441816 + MIR3 SINE MIR 20 152 -56 253 60 0 40 chr2 216246038 216246088 -34441766 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 294 390 21 27 chr2 216246088 216246142 -34441712 + MIR3 SINE MIR 152 205 -3 553 219 77 66 chr2 216246339 216246485 -34441369 + MER3 DNA MER1_type 1 151 -58 2185 110 3 0 chr2 216246485 216246777 -34441077 + AluSp SINE Alu 1 293 -20 553 219 77 66 chr2 216246777 216246826 -34441028 + MER3 DNA MER1_type 151 198 -11 402 315 45 0 chr2 216247817 216247928 -34439926 - L2 LINE L2 -2 3270 3155 282 323 71 66 chr2 216247945 216248323 -34439531 + L2 LINE L2 2425 2804 -510 280 218 13 13 chr2 216248336 216248414 -34439440 - MER116 DNA Mariner 0 80 3 2484 104 26 3 chr2 216248685 216249068 -34438786 + L1PA16 LINE L1 5775 6166 0 21 0 0 0 chr2 216249552 216249573 -34438281 + AT_rich Low_complexity Low_complexity 1 21 0 707 61 0 10 chr2 216249624 216249722 -34438132 + (TAGA)n Simple_repeat Simple_repeat 4 100 0 386 299 51 8 chr2 216249896 216250013 -34437841 + MIR SINE MIR 113 234 -28 545 0 15 0 chr2 216250134 216250199 -34437655 + (TCTA)n Simple_repeat Simple_repeat 3 68 0 313 314 23 0 chr2 216250699 216250785 -34437069 - L2 LINE L2 -8 3305 3218 21 0 0 0 chr2 216252658 216252679 -34435175 + AT_rich Low_complexity Low_complexity 1 21 0 294 95 0 0 chr2 216253539 216253581 -34434273 + (CA)n Simple_repeat Simple_repeat 2 43 0 277 246 130 0 chr2 216254627 216254696 -34433158 - MIR3 SINE MIR -50 158 81 21 57 0 0 chr2 216255215 216255250 -34432604 + AT_rich Low_complexity Low_complexity 1 35 0 185 310 65 45 chr2 216256158 216256292 -34431562 - L2 LINE L2 0 3313 3174 2117 95 11 21 chr2 216256292 216256577 -34431277 + AluSx SINE Alu 1 282 -30 185 310 65 45 chr2 216256577 216256597 -34431257 - L2 LINE L2 -139 3174 3156 26 0 0 0 chr2 216256579 216256605 -34431249 + AT_rich Low_complexity Low_complexity 1 26 0 * 644 293 99 14 chr2 216256851 216257145 -34430709 + L2 LINE L2 2995 3313 0 2517 49 7 0 chr2 216257294 216257598 -34430256 - AluY SINE Alu -5 306 1 28 29 0 0 chr2 216257789 216257824 -34430030 + AT_rich Low_complexity Low_complexity 1 35 0 243 182 30 0 chr2 216258151 216258217 -34429637 + MER116 DNA Mariner 13 80 0 1517 197 38 80 chr2 216258273 216258370 -34429484 + L1MA9 LINE L1 5689 5789 -523 318 26 0 0 chr2 216258370 216258409 -34429445 + (TG)n Simple_repeat Simple_repeat 2 40 0 1517 197 38 80 chr2 216258409 216258737 -34429117 + L1MA9 LINE L1 5789 6096 -216 358 111 0 74 chr2 216258737 216258818 -34429036 + L1MA7 LINE L1 6214 6288 -3 1942 186 26 3 chr2 216258834 216259220 -34428634 + L1MB7 LINE L1 5773 6167 -17 201 245 0 0 chr2 216259226 216259245 -34428609 + A-rich Low_complexity Low_complexity 1 19 -34 2350 97 10 0 chr2 216259245 216259554 -34428300 + AluSx SINE Alu 1 312 0 201 245 0 0 chr2 216259554 216259587 -34428267 + A-rich Low_complexity Low_complexity 18 53 0 390 307 0 0 chr2 216259687 216259801 -34428053 + L1ME4a LINE L1 5718 5831 -290 387 219 134 0 chr2 216260098 216260244 -34427610 - HsTC2 DNA Tc2 -2 1896 4 216 0 0 0 chr2 216261464 216261488 -34426366 + (TG)n Simple_repeat Simple_repeat 1 24 0 181 361 0 14 chr2 216262517 216262589 -34425265 + L2 LINE L2 1374 1444 -1870 21 36 0 0 chr2 216262674 216262702 -34425152 + AT_rich Low_complexity Low_complexity 1 28 0 1080 197 128 43 chr2 216262873 216263218 -34424636 + MLT1A2 LTR MaLR 1 374 0 1721 207 61 101 chr2 216264012 216264072 -34423782 + MER119 DNA MER1_type 8 69 -514 2055 154 0 0 chr2 216264072 216264383 -34423471 - AluJb SINE Alu -1 311 1 1721 207 61 101 chr2 216264383 216264915 -34422939 + MER119 DNA MER1_type 69 576 -7 488 160 19 19 chr2 216265323 216265429 -34422425 + L1MB3 LINE L1 6075 6180 -3 1367 131 0 5 chr2 216265959 216266158 -34421696 - AluSg/x SINE Alu -12 300 103 3595 153 25 33 chr2 216266401 216266772 -34421082 + L1MA9 LINE L1 4889 5262 -1050 1841 164 3 3 chr2 216266772 216267082 -34420772 + AluJb SINE Alu 1 310 -2 3595 153 25 33 chr2 216267082 216267774 -34420080 + L1MA9 LINE L1 5262 5950 -362 2295 113 34 20 chr2 216367777 216368186 -34319668 + MER11A LTR ERVK 852 1266 0 2670 92 11 0 chr2 216368271 216368630 -34319224 + THE1B LTR MaLR 1 363 -1 2333 85 0 3 chr2 216368661 216368956 -34318898 + AluY SINE Alu 1 294 -17 2059 138 3 0 chr2 216368995 216369300 -34318554 - AluSx SINE Alu -6 306 1 444 170 53 11 chr2 216369507 216369601 -34318253 - MER5A DNA MER1_type -2 187 90 21 0 0 0 chr2 216369659 216369680 -34318174 + AT_rich Low_complexity Low_complexity 1 21 0 5544 198 34 23 chr2 216369991 216372357 -34315497 + L1MC1 LINE L1 3934 6332 -1 2382 104 3 0 chr2 216372424 216372733 -34315121 - AluSq SINE Alu -3 310 1 22 0 0 0 chr2 216372742 216372764 -34315090 + AT_rich Low_complexity Low_complexity 1 22 0 1005 247 53 0 chr2 216373542 216373805 -34314049 + LTR16A LTR ERVL 168 444 -6 443 298 28 7 chr2 216373844 216373985 -34313869 + HERV16 LTR ERVL 37 180 -4816 1503 213 100 15 chr2 216374093 216374493 -34313361 - MLT1C LTR MaLR 0 467 34 2246 108 10 0 chr2 216374494 216374799 -34313055 + AluSg SINE Alu 1 308 -2 992 82 11 33 chr2 216374799 216374835 -34313019 + (GAAA)n Simple_repeat Simple_repeat 1 215 0 992 82 11 33 chr2 216374835 216375019 -34312835 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2622 303 52 25 chr2 216375178 216375754 -34312100 + HERV16 LTR ERVL 373 932 -4064 1836 163 24 0 chr2 216375754 216376043 -34311811 + AluSx SINE Alu 1 296 -16 2622 303 52 25 chr2 216376043 216377128 -34310726 + HERV16 LTR ERVL 932 2202 -2794 1169 177 32 86 chr2 216377129 216377465 -34310389 - MLT1B LTR MaLR 0 390 70 545 195 122 0 chr2 216377468 216377591 -34310263 + MLT1D LTR MaLR 273 410 -95 2355 132 56 5 chr2 216377591 216378017 -34309837 + MER4B-int LTR ERV1 5358 5805 -953 592 165 0 0 chr2 216378017 216378120 -34309734 + MLT1D LTR MaLR 403 505 0 211 228 131 46 chr2 216378160 216378269 -34309585 + MER5B DNA MER1_type 70 169 -9 274 262 22 109 chr2 216379179 216379362 -34308492 + MLT1J1 LTR MaLR 14 180 -266 436 288 195 0 chr2 216379681 216379896 -34307958 - MLT1H LTR MaLR -292 257 1 537 230 0 37 chr2 216380049 216380184 -34307670 - MLT1C LTR MaLR 0 467 338 546 194 161 19 chr2 216380212 216380367 -34307487 - MLT1C LTR MaLR -24 443 267 2085 111 52 41 chr2 216380415 216380784 -34307070 + THE1C LTR MaLR 3 375 0 1959 129 21 62 chr2 216380785 216381171 -34306683 - LTR57 LTR ERVL -41 370 1 527 209 104 57 chr2 216381184 216381414 -34306440 - MLT1C LTR MaLR -224 243 3 266 232 0 17 chr2 216382454 216382520 -34305334 + MIR SINE MIR 64 128 -80 186 43 0 0 chr2 216383662 216383685 -34304169 + (TC)n Simple_repeat Simple_repeat 2 24 0 313 252 196 0 chr2 216384591 216384698 -34303156 - MIR SINE MIR -52 210 83 281 245 61 110 chr2 216384898 216384963 -34302891 + L2 LINE L2 3158 3225 -88 1463 110 5 23 chr2 216384963 216385181 -34302673 + AluSq SINE Alu 77 290 -23 281 245 61 110 chr2 216385181 216385278 -34302576 + L2 LINE L2 3225 3312 -1 365 108 0 46 chr2 216385385 216385450 -34302404 + MLT1A2 LTR MaLR 1 62 -312 718 273 108 66 chr2 216385454 216386216 -34301638 + LTR1B LTR ERV1 33 826 0 1613 116 4 0 chr2 216386240 216386472 -34301382 + AluSp SINE Alu 1 233 -80 1738 178 26 7 chr2 216386859 216387163 -34300691 - AluJb SINE Alu -2 310 1 25 0 0 0 chr2 216387894 216387919 -34299935 + AT_rich Low_complexity Low_complexity 1 25 0 424 305 28 0 chr2 216388207 216388348 -34299506 - MIR SINE MIR 0 262 118 490 61 25 245 chr2 216388358 216388513 -34299341 - LTR14B LTR ERVK -242 102 1 327 280 102 25 chr2 216388518 216388636 -34299218 - L1MC4 LINE L1 -585 7457 7331 998 66 0 0 chr2 216388915 216389036 -34298818 + AluY SINE Alu 1 121 -190 237 35 0 0 chr2 216389070 216389099 -34298755 + LTR14A LTR ERVK 179 207 -137 2042 70 22 18 chr2 216390570 216390842 -34297012 - AluSg SINE Alu -6 304 32 1381 193 58 25 chr2 216390847 216391240 -34296614 - Charlie1 DNA MER1_type -11 2750 2345 477 217 202 0 chr2 216391300 216391429 -34296425 - MER5A DNA MER1_type -14 175 21 180 382 101 0 chr2 216391762 216391851 -34296003 + MIR SINE MIR 37 134 -128 1048 247 14 140 chr2 216392021 216392315 -34295539 + L2 LINE L2 2804 2989 -324 825 139 8 0 chr2 216392315 216392444 -34295410 - FLAM_C SINE Alu -3 130 1 1048 247 14 140 chr2 216392444 216392733 -34295121 + L2 LINE L2 2989 3313 0 2035 155 3 3 chr2 216392790 216393100 -34294754 + AluSx SINE Alu 1 310 -2 423 208 15 31 chr2 216393259 216393389 -34294465 + Charlie2 DNA MER1_type 2735 2862 0 316 97 306 0 chr2 216394660 216394722 -34293132 - MER47A DNA MER2_type 0 366 286 1328 170 3 39 chr2 216394859 216395141 -34292713 - MER47A DNA MER2_type -79 287 16 1021 153 0 0 chr2 216395322 216395502 -34292352 - AluJo SINE Alu 0 315 136 1763 164 32 29 chr2 216396232 216396543 -34291311 + AluJo SINE Alu 1 312 0 27 49 0 0 chr2 216396664 216396705 -34291149 + AT_rich Low_complexity Low_complexity 1 41 0 216 0 0 0 chr2 216396921 216396945 -34290909 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 737 285 67 41 chr2 216397230 216397722 -34290132 + L1ME4a LINE L1 5318 5822 -299 34 0 0 0 chr2 216397757 216397791 -34290063 + AT_rich Low_complexity Low_complexity 1 34 0 294 204 0 0 chr2 216397861 216397954 -34289900 + T-rich Low_complexity Low_complexity 1 93 0 272 311 49 102 chr2 216398907 216399232 -34288622 - L2 LINE L2 -58 3255 2948 536 15 29 0 chr2 216400286 216400354 -34287500 + (TTTC)n Simple_repeat Simple_repeat 3 72 0 750 175 0 44 chr2 216400780 216400917 -34286937 - AluJo SINE Alu -178 134 4 190 360 80 0 chr2 216400991 216401091 -34286763 - MIR SINE MIR -78 130 23 * 279 252 184 10 chr2 216401067 216401170 -34286684 + MIR SINE MIR 64 184 -78 2226 99 7 0 chr2 216401309 216401601 -34286253 - AluSq SINE Alu -19 294 1 1525 160 15 4 chr2 216401719 216401981 -34285873 - MER68 LTR ERV1 -297 265 1 311 297 0 0 chr2 216402001 216402065 -34285789 - L2 LINE L2 -8 3264 3201 1526 236 88 25 chr2 216402183 216402658 -34285196 - MLT1D LTR MaLR 0 505 1 2201 110 0 7 chr2 216402688 216402988 -34284866 + AluSq SINE Alu 3 300 -13 2082 122 128 18 chr2 216403023 216403407 -34284447 - MSTA LTR MaLR -2 426 1 402 260 142 20 chr2 216403604 216403808 -34284046 + L1ME4a LINE L1 5893 6121 0 1735 196 0 0 chr2 216403864 216404155 -34283699 - AluJo SINE Alu -21 291 1 22 56 0 0 chr2 216404331 216404367 -34283487 + AT_rich Low_complexity Low_complexity 1 36 0 1268 158 9 44 chr2 216405017 216405245 -34282609 + AluJo SINE Alu 1 220 -92 183 256 163 0 chr2 216405476 216405519 -34282335 + L2 LINE L2 3253 3302 -11 21 57 0 0 chr2 216405674 216405709 -34282145 + AT_rich Low_complexity Low_complexity 1 35 0 404 279 248 9 chr2 216405942 216406261 -34281593 + L1ME4a LINE L1 5718 6112 -9 362 328 90 53 chr2 216407216 216407765 -34280089 - L2 LINE L2 -198 3074 2487 578 121 44 0 chr2 216407940 216408031 -34279823 + AluJo SINE Alu 206 300 -12 231 258 32 0 chr2 216408039 216408132 -34279722 - L2 LINE L2 -1067 2247 2152 1865 144 39 16 chr2 216408358 216408663 -34279191 - AluJo SINE Alu 0 312 1 21 36 0 0 chr2 216408759 216408787 -34279067 + AT_rich Low_complexity Low_complexity 1 28 0 2340 103 3 0 chr2 216409493 216409804 -34278050 + AluSx SINE Alu 1 312 0 313 310 86 59 chr2 216409916 216410103 -34277751 + MIR SINE MIR 1 192 -70 800 217 0 0 chr2 216410982 216411125 -34276729 + FRAM SINE Alu 4 146 -30 25 31 0 0 chr2 216411125 216411157 -34276697 + AT_rich Low_complexity Low_complexity 1 32 0 846 296 71 88 chr2 216411543 216412426 -34275428 - L2 LINE L2 -1055 2259 1392 2160 108 0 14 chr2 216412426 216412740 -34275114 + AluSx SINE Alu 1 310 0 846 296 71 88 chr2 216412740 216412843 -34275011 - L2 LINE L2 -1922 1392 1289 229 319 14 28 chr2 216412885 216412957 -34274897 - L2 LINE L2 -2141 1173 1103 21 0 0 0 chr2 216413399 216413420 -34274434 + AT_rich Low_complexity Low_complexity 1 21 0 198 71 0 0 chr2 216413441 216413469 -34274385 + MIR SINE MIR 159 186 -76 2469 148 20 8 chr2 216413479 216413870 -34273984 - MER61B LTR ERV1 -29 396 1 320 224 40 0 chr2 216413870 216413946 -34273908 + MIR SINE MIR 183 261 -1 1824 177 0 0 chr2 216414774 216415056 -34272798 + AluJb SINE Alu 1 282 -30 28 71 0 0 chr2 216415316 216415372 -34272482 + AT_rich Low_complexity Low_complexity 1 56 0 22 56 0 0 chr2 216415559 216415595 -34272259 + AT_rich Low_complexity Low_complexity 1 36 0 560 243 89 18 chr2 216415989 216416158 -34271696 - MIR SINE MIR 0 262 82 183 250 0 42 chr2 216416551 216416599 -34271255 + L3b LINE CR1 1528 1573 -10 2512 119 3 16 chr2 216418485 216418854 -34269000 - THE1B LTR MaLR 0 364 1 250 388 73 28 chr2 216419965 216420143 -34267711 + MIR3 SINE MIR 2 187 -21 23 0 0 0 chr2 216420907 216420930 -34266924 + AT_rich Low_complexity Low_complexity 1 23 0 655 250 0 26 chr2 216420986 216421138 -34266716 + FRAM SINE Alu 4 151 -15 1997 140 6 16 chr2 216422299 216422614 -34265240 - AluSx SINE Alu 0 312 1 2005 107 28 7 chr2 216423606 216423917 -34263937 + AluSx SINE Alu 1 317 0 194 284 23 131 chr2 216424894 216425070 -34262784 + MIR SINE MIR 36 192 -70 219 259 0 0 chr2 216426711 216426769 -34261085 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 2167 119 10 0 chr2 216427049 216427351 -34260503 - AluSg SINE Alu -5 305 1 30621 111 16 56 chr2 216427354 216429780 -34258074 - L1PA7 LINE L1 -11 6143 3622 441 0 0 0 chr2 216429780 216429829 -34258025 + (TG)n Simple_repeat Simple_repeat 2 50 0 30621 111 16 56 chr2 216429829 216433736 -34254118 - L1PA7 LINE L1 -2532 3622 73 186 353 59 10 chr2 216434031 216434133 -34253721 + MIR SINE MIR 7 113 -149 294 226 182 71 chr2 216435417 216435841 -34252013 - L1MC5 LINE L1 -48 7913 7443 1608 224 225 9 chr2 216435876 216436598 -34251256 - L1ME1 LINE L1 -27 6139 5257 1821 237 123 12 chr2 216436598 216437104 -34250750 - REP3 LTR ERV 0 562 1 1189 233 44 8 chr2 216437104 216437464 -34250390 - L1ME1 LINE L1 -885 5261 4889 2912 48 25 20 chr2 216437464 216437864 -34249990 + L1PA13 LINE L1 5760 6161 -2 862 103 26 5 chr2 216437906 216438101 -34249753 + L1 LINE L1 4156 4410 -1736 684 209 55 89 chr2 216438127 216438362 -34249492 + MLT1J LTR MaLR 173 399 -112 397 189 85 85 chr2 216438396 216438549 -34249305 - MER104 DNA Tc2 -26 154 2 1553 184 50 89 chr2 216438688 216439063 -34248791 - L1ME1 LINE L1 -40 6126 5771 2224 110 3 0 chr2 216439063 216439362 -34248492 - AluSq SINE Alu -13 300 1 1553 184 50 89 chr2 216439362 216439448 -34248406 - L1ME1 LINE L1 -395 5771 5683 363 145 0 0 chr2 216439754 216439823 -34248031 + (GGGTG)n Simple_repeat Simple_repeat 5 73 0 939 43 0 0 chr2 216439832 216439948 -34247906 + (AATAG)n Simple_repeat Simple_repeat 1 116 0 280 287 147 27 chr2 216439977 216440127 -34247727 + MIR SINE MIR 20 187 -75 * 714 243 58 26 chr2 216440126 216440352 -34247502 - L2 LINE L2 0 3313 3081 276 345 97 0 chr2 216440352 216440465 -34247389 + L2 LINE L2 3144 3267 -5 2376 58 0 39 chr2 216441193 216441502 -34246352 + AluY SINE Alu 1 297 -14 266 252 271 9 chr2 216441619 216441726 -34246128 + L2 LINE L2 3179 3313 0 281 307 34 0 chr2 216442058 216442146 -34245708 + L2 LINE L2 3219 3309 -4 429 36 0 0 chr2 216443476 216443531 -34244323 + (CGG)n Simple_repeat Simple_repeat 3 57 0 401 234 174 13 chr2 216445407 216445642 -34242212 - L1ME4a LINE L1 -239 5882 5610 181 143 0 0 chr2 216445916 216445944 -34241910 + L2 LINE L2 3272 3299 -14 22 80 0 0 chr2 216447089 216447139 -34240715 + AT_rich Low_complexity Low_complexity 1 50 0 337 169 48 36 chr2 216447780 216447863 -34239991 - AluJ/FRAM SINE Alu -3 299 216 1668 163 55 15 chr2 216448702 216449028 -34238826 - MER44D DNA MER2_type 0 609 1 22 0 0 0 chr2 216449173 216449195 -34238659 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr2 216449308 216449349 -34238505 + AT_rich Low_complexity Low_complexity 1 41 0 206 118 0 0 chr2 216449608 216449642 -34238212 + (T)n Simple_repeat Simple_repeat 1 34 0 1952 104 0 4 chr2 216449704 216449963 -34237891 + AluSg SINE Alu 51 308 -2 463 203 120 31 chr2 216450597 216450789 -34237065 + Charlie5 DNA MER1_type 2411 2619 0 346 333 94 0 chr2 216450905 216451022 -34236832 - L2 LINE L2 -4 3268 3141 22 56 0 0 chr2 216451087 216451123 -34236731 + AT_rich Low_complexity Low_complexity 1 36 0 4186 153 45 14 chr2 216451142 216451922 -34235932 - L1MCa LINE L1 -5039 1387 584 1161 269 111 47 chr2 216451982 216452540 -34235314 + L2 LINE L2 1939 2532 -782 21 0 0 0 chr2 216452547 216452568 -34235286 + AT_rich Low_complexity Low_complexity 1 21 0 222 37 0 0 chr2 216452569 216452596 -34235258 + (TA)n Simple_repeat Simple_repeat 1 27 0 899 124 0 23 chr2 216452741 216452870 -34234984 - FLAM_C SINE Alu -11 132 7 241 118 0 0 chr2 216452877 216452928 -34234926 + L1MA3 LINE L1 6254 6304 -1 23 0 0 0 chr2 216452928 216452951 -34234903 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 216453029 216453052 -34234802 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr2 216453193 216453225 -34234629 + AT_rich Low_complexity Low_complexity 1 32 0 3929 225 83 27 chr2 216453225 216453531 -34234323 - L1M4 LINE L1 -982 5164 4876 2402 86 3 0 chr2 216453531 216453833 -34234021 + AluSx SINE Alu 1 303 -9 3929 225 83 27 chr2 216453833 216454770 -34233084 - L1M4 LINE L1 -1270 4876 3840 2187 61 57 4 chr2 216454770 216455049 -34232805 - AluY SINE Alu -17 294 1 3929 225 83 27 chr2 216455049 216455132 -34232722 - L1M4 LINE L1 -2306 3840 3763 1125 272 127 13 chr2 216455234 216455715 -34232139 - L2 LINE L2 -4 3309 2770 302 325 17 34 chr2 216455730 216455847 -34232007 - L2 LINE L2 0 3313 3199 1803 217 112 25 chr2 216456231 216456748 -34231106 - MLT1F1 LTR MaLR 0 567 7 402 129 32 0 chr2 216456903 216456965 -34230889 - AluJ/FRAM SINE Alu -7 295 232 750 153 8 0 chr2 216456965 216457089 -34230765 - AluJb SINE Alu -187 125 1 1709 172 20 0 chr2 216457099 216457401 -34230453 - AluJo SINE Alu 0 312 5 229 234 140 47 chr2 216458329 216458436 -34229418 - L1P2 LINE L1 -332 5822 5706 326 238 57 35 chr2 216458566 216458791 -34229063 - L1MC/D LINE L1 -860 5286 5209 2171 125 0 0 chr2 216459393 216459689 -34228165 - AluSx SINE Alu -16 296 1 23 0 0 0 chr2 216459785 216459808 -34228046 + AT_rich Low_complexity Low_complexity 1 23 0 236 167 24 0 chr2 216459952 216459994 -34227860 - L2 LINE L2 -10 3303 3261 2322 101 0 7 chr2 216461437 216461745 -34226109 - AluSg SINE Alu -4 306 1 254 317 139 10 chr2 216462186 216462287 -34225567 - L2 LINE L2 -15 3298 3185 648 240 35 0 chr2 216462358 216462529 -34225325 + MER3 DNA MER1_type 1 130 -79 1463 91 24 0 chr2 216462632 216462842 -34225012 + L1PA13 LINE L1 5947 6161 -2 572 259 42 32 chr2 216463038 216463227 -34224627 - MIR SINE MIR -15 247 57 1672 162 7 23 chr2 216463498 216463801 -34224053 + AluJb SINE Alu 1 298 -14 2336 107 3 0 chr2 216464008 216464318 -34223536 - AluSp SINE Alu -2 311 1 23 92 0 0 chr2 216465178 216465243 -34222611 + AT_rich Low_complexity Low_complexity 1 65 0 23 33 0 0 chr2 216465900 216465930 -34221924 + AT_rich Low_complexity Low_complexity 1 30 0 1507 184 38 10 chr2 216467343 216467636 -34220218 - AluJo SINE Alu -7 305 5 263 265 0 0 chr2 216467787 216467836 -34220018 - MIR SINE MIR -126 82 34 306 339 16 59 chr2 216468431 216468617 -34219237 + L1MA7 LINE L1 958 1135 -5963 7128 211 74 107 chr2 216469543 216473170 -34214684 + L1MA7 LINE L1 1591 5339 -1973 1532 228 32 0 chr2 216473170 216473516 -34214338 - MLT1A1 LTR MaLR -8 357 1 7128 211 74 107 chr2 216473516 216474817 -34213037 + L1MA7 LINE L1 5339 6341 -971 1561 182 0 4 chr2 216474817 216475081 -34212773 + AluJb SINE Alu 42 304 -8 7128 211 74 107 chr2 216475081 216475529 -34212325 + L1MA7 LINE L1 6341 6803 -509 299 217 72 0 chr2 216475545 216475614 -34212240 + L1MA7 LINE L1 7058 7131 -181 1995 121 4 0 chr2 216475696 216476002 -34211852 - AluSq SINE Alu 0 307 1 512 189 67 74 chr2 216476029 216476223 -34211631 + L1MA7 LINE L1 7133 7332 -1 1692 145 4 0 chr2 216476342 216476611 -34211243 - L1PA16 LINE L1 -12 6154 5885 23 0 0 0 chr2 216476621 216476644 -34211210 + AT_rich Low_complexity Low_complexity 1 23 0 263 206 59 15 chr2 216476697 216476765 -34211089 + HsTC2 DNA Tc2 2 72 -1826 1832 175 0 0 chr2 216476778 216477070 -34210784 - AluJb SINE Alu -20 292 1 21 0 0 0 chr2 216477662 216477683 -34210171 + AT_rich Low_complexity Low_complexity 1 21 0 420 327 149 0 chr2 216478061 216478229 -34209625 - MER91A DNA MER1_type 0 196 4 621 328 0 5 chr2 216479267 216479459 -34208395 - MLT1J LTR MaLR -312 199 9 442 246 192 4 chr2 216480412 216480672 -34207182 + L1MEc LINE L1 813 1121 -5275 * 797 261 48 35 chr2 216480670 216480981 -34206873 + L1MEc LINE L1 1500 1814 -4582 * 927 264 40 12 chr2 216480975 216481304 -34206550 + L1MEc LINE L1 2919 3256 -2959 22 70 0 0 chr2 216481469 216481512 -34206342 + AT_rich Low_complexity Low_complexity 1 43 0 947 159 59 12 chr2 216481548 216481718 -34206136 - MER2 DNA MER2_type -167 178 1 1080 278 77 11 chr2 216481718 216482157 -34205697 + L1MEc LINE L1 3418 3885 -2330 1784 151 34 0 chr2 216482822 216483114 -34204740 + AluSx SINE Alu 1 302 -10 252 263 50 12 chr2 216483552 216483632 -34204222 - MLT1I LTR MaLR 0 409 327 310 217 43 22 chr2 216483729 216483821 -34204033 - MLT1J2 LTR MaLR -290 160 67 212 328 126 35 chr2 216483846 216484020 -34203834 + L2 LINE L2 2591 2780 -534 1361 167 8 29 chr2 216484477 216484723 -34203131 - L1MC1 LINE L1 -6 6327 6087 25 75 0 0 chr2 216485104 216485157 -34202697 + AT_rich Low_complexity Low_complexity 1 53 0 22 35 0 0 chr2 216485904 216485933 -34201921 + AT_rich Low_complexity Low_complexity 1 29 0 9293 213 31 40 chr2 216486064 216486997 -34200857 - L1MB3 LINE L1 -21 6398 5459 1858 163 3 10 chr2 216486997 216487304 -34200550 - AluJb SINE Alu -7 305 1 9293 213 31 40 chr2 216487304 216487767 -34200087 - L1MB3 LINE L1 -960 5459 4994 817 143 0 50 chr2 216487767 216487907 -34199947 - FLAM_C SINE Alu 0 133 1 9293 213 31 40 chr2 216487907 216487996 -34199858 - L1MB3 LINE L1 -1425 4994 4906 1985 134 0 10 chr2 216487996 216488286 -34199568 - AluSx SINE Alu -25 287 1 9293 213 31 40 chr2 216488286 216489540 -34198314 - L1MB3 LINE L1 -1513 4906 3695 2151 102 0 0 chr2 216489540 216489847 -34198007 - AluSq SINE Alu 0 307 1 9293 213 31 40 chr2 216489847 216490823 -34197031 - L1MB3 LINE L1 -2724 3695 2712 523 120 40 88 chr2 216490849 216490974 -34196880 - LTR45B LTR ERV1 -26 463 345 9782 149 23 43 chr2 216490996 216493154 -34194700 - L1MA3 LINE L1 -6 7718 5518 6625 80 1 12 chr2 216493154 216494402 -34193452 - L1PA13 LINE L1 -2 6161 4920 1950 136 3 10 chr2 216494402 216494711 -34193143 - AluSx SINE Alu -5 307 1 6625 80 1 12 chr2 216494711 216494951 -34192903 - L1PA13 LINE L1 -1243 4920 4679 9782 149 23 43 chr2 216494951 216495608 -34192246 - L1MA3 LINE L1 -2206 5518 4849 2257 87 0 50 chr2 216495608 216495931 -34191923 - AluSc SINE Alu -2 307 1 9782 149 23 43 chr2 216495931 216495955 -34191899 - L1MA3 LINE L1 -2875 4849 4826 1701 189 14 3 chr2 216495955 216496252 -34191602 - AluJb SINE Alu -10 302 3 9782 149 23 43 chr2 216496252 216496316 -34191538 - L1MA3 LINE L1 -2898 4826 4762 2115 112 6 16 chr2 216496316 216496629 -34191225 - AluSp SINE Alu 0 313 4 2314 94 0 7 chr2 216496638 216496937 -34190917 - AluSp SINE Alu -16 297 1 9782 149 23 43 chr2 216496937 216497158 -34190696 - L1MA3 LINE L1 -2970 4754 4648 * 9874 143 75 4 chr2 216497152 216498842 -34189012 - L1MA3 LINE L1 -4656 2909 1099 627 148 8 62 chr2 216498837 216498965 -34188889 - L1MA3 LINE L1 -7430 135 15 * 12392 164 40 28 chr2 216499459 216502053 -34185801 - L1MB3 LINE L1 -3691 2691 46 888 118 7 0 chr2 216502053 216502197 -34185657 + L1MA5A LINE L1 6153 6297 0 452 307 55 0 chr2 216502263 216502481 -34185373 - HAL1 LINE L1 -847 1660 1431 * 939 42 8 0 chr2 216502480 216502599 -34185255 - L1P LINE L1 -1162 4984 4865 3974 43 0 0 chr2 216502599 216503083 -34184771 + L1PA4 LINE L1 5668 6152 -3 1944 228 19 4 chr2 216503201 216503667 -34184187 - L1ME1 LINE L1 -41 6125 5653 1769 157 0 45 chr2 216503691 216504003 -34183851 - AluJb SINE Alu -14 298 1 252 267 85 47 chr2 216504031 216504289 -34183565 - L1MEd LINE L1 -4904 1215 948 33 43 0 0 chr2 216504980 216505027 -34182827 + AT_rich Low_complexity Low_complexity 1 47 0 2358 74 0 17 chr2 216506986 216507284 -34180570 + AluY SINE Alu 1 293 -18 24 0 0 0 chr2 216507284 216507308 -34180546 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr2 216507565 216507602 -34180252 + AT_rich Low_complexity Low_complexity 1 37 0 1936 140 20 0 chr2 216508039 216508332 -34179522 - AluSx SINE Alu -13 299 1 21 36 0 0 chr2 216508342 216508370 -34179484 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 216508896 216508924 -34178930 + AT_rich Low_complexity Low_complexity 1 28 0 289 181 49 7 chr2 216509428 216509572 -34178282 + (TA)n Simple_repeat Simple_repeat 2 151 0 30 0 0 0 chr2 216510891 216510921 -34176933 + AT_rich Low_complexity Low_complexity 1 30 0 7430 41 0 0 chr2 216511336 216512542 -34175312 - L1PA5 LINE L1 0 6154 4952 2119 80 43 3 chr2 216512542 216512843 -34175011 + L1PA5 LINE L1 4658 4970 -1176 688 233 63 0 chr2 216513471 216513630 -34174224 - MER45A DNA AcHobo -9 169 1 1936 149 3 0 chr2 216513881 216514177 -34173677 + AluJo SINE Alu 1 297 -15 1996 161 3 3 chr2 216514471 216514807 -34173047 - MER1B DNA MER1_type 0 337 2 330 255 27 47 chr2 216515664 216515813 -34172041 + L1ME4a LINE L1 5956 6101 -20 36 40 0 0 chr2 216515904 216515954 -34171900 + AT_rich Low_complexity Low_complexity 1 50 0 526 259 18 107 chr2 216516054 216516278 -34171576 + MIR SINE MIR 46 249 -13 31 0 0 0 chr2 216517478 216517509 -34170345 + AT_rich Low_complexity Low_complexity 1 31 0 1803 133 0 4 chr2 216517617 216517887 -34169967 + AluSx SINE Alu 44 312 0 245 373 79 32 chr2 216518349 216518475 -34169379 - L2 LINE L2 -2 3270 3139 1163 230 80 16 chr2 216518524 216519215 -34168639 - Charlie7 DNA MER1_type -365 2247 1485 207 335 153 24 chr2 216519361 216519609 -34168245 - L2 LINE L2 -1366 1948 1669 235 283 0 0 chr2 216519868 216519921 -34167933 + CT-rich Low_complexity Low_complexity 3 55 0 2781 161 61 6 chr2 216520590 216521135 -34166719 - L1MB3 LINE L1 -15 6168 5594 1896 139 0 0 chr2 216521388 216521681 -34166173 + AluSx SINE Alu 16 308 0 611 309 66 45 chr2 216521976 216522952 -34164902 + L1MEd LINE L1 563 1588 -4722 231 149 40 95 chr2 216523250 216523324 -34164530 + L1ME3A LINE L1 6004 6073 -97 1683 145 32 14 chr2 216523986 216524268 -34163586 + AluJo SINE Alu 1 287 -25 228 196 19 140 chr2 216524569 216524676 -34163178 + MIR SINE MIR 166 259 -3 188 312 118 0 chr2 216525241 216525334 -34162520 + MIR SINE MIR 84 187 -75 373 307 26 57 chr2 216526715 216526907 -34160947 - L2 LINE L2 -10 3303 3118 420 269 23 58 chr2 216527066 216527237 -34160617 + L2 LINE L2 3148 3312 -1 1598 195 36 3 chr2 216527500 216527802 -34160052 + AluJb SINE Alu 1 312 0 24 0 0 0 chr2 216528019 216528043 -34159811 + AT_rich Low_complexity Low_complexity 1 24 0 44 20 0 0 chr2 216528872 216528923 -34158931 + AT_rich Low_complexity Low_complexity 1 51 0 385 273 16 33 chr2 216528959 216529142 -34158712 + L1ME4a LINE L1 5740 5919 -202 469 239 113 42 chr2 216529473 216529854 -34158000 - L1MC5 LINE L1 -48 7913 7506 2290 102 7 0 chr2 216529909 216530213 -34157641 + AluSc SINE Alu 1 306 -3 2268 109 0 0 chr2 216530385 216530679 -34157175 - AluSq SINE Alu -19 294 1 2028 60 0 8 chr2 216530969 216531219 -34156635 - AluY SINE Alu -10 301 54 1466 196 127 21 chr2 216531488 216531906 -34155948 - MLT1C LTR MaLR 0 467 6 1347 200 8 4 chr2 216532620 216532880 -34154974 + AluJo SINE Alu 34 294 -18 196 305 32 53 chr2 216533015 216533110 -34154744 - L2 LINE L2 0 3272 3180 452 325 42 114 chr2 216533129 216533560 -34154294 - L2 LINE L2 -1 3271 2872 802 190 68 64 chr2 216533562 216533684 -34154170 - LTR56 LTR ERV1 0 445 325 2126 139 0 0 chr2 216533684 216533994 -34153860 - AluSx SINE Alu -2 310 1 802 190 68 64 chr2 216533994 216534267 -34153587 - LTR56 LTR ERV1 -120 325 75 684 197 0 0 chr2 216534267 216534394 -34153460 - FLAM_A SINE Alu 0 142 16 394 113 38 38 chr2 216534397 216534477 -34153377 - LTR56 LTR ERV1 -365 80 1 389 299 100 64 chr2 216534505 216534644 -34153210 - L2 LINE L2 -441 2873 2740 330 87 0 0 chr2 216534644 216534690 -34153164 + (TG)n Simple_repeat Simple_repeat 2 47 0 389 299 100 64 chr2 216534690 216534861 -34152993 - L2 LINE L2 -574 2740 2552 885 89 0 0 chr2 216535093 216535217 -34152637 + (TA)n Simple_repeat Simple_repeat 2 125 0 2156 108 17 0 chr2 216535217 216535505 -34152349 - AluSx SINE Alu -19 293 1 991 184 0 0 chr2 216535702 216535865 -34151989 + FRAM SINE Alu 1 161 -15 1868 112 0 117 chr2 216536491 216536883 -34150971 + MER7A DNA MER2_type 3 346 0 51 31 0 0 chr2 216538101 216538166 -34149688 + AT_rich Low_complexity Low_complexity 1 65 0 2111 129 3 19 chr2 216538332 216538649 -34149205 + AluSx SINE Alu 1 312 0 184 59 59 0 chr2 216538992 216539026 -34148828 + T-rich Low_complexity Low_complexity 14 49 0 1182 108 0 117 chr2 216540165 216540379 -34147475 + AluSq SINE Alu 2 190 -123 433 350 68 53 chr2 216540626 216540949 -34146905 + L2 LINE L2 2938 3265 -7 336 24 0 0 chr2 216541011 216541052 -34146802 + (TG)n Simple_repeat Simple_repeat 2 42 0 858 175 0 92 chr2 216541145 216541282 -34146572 + MER3 DNA MER1_type 13 124 -85 876 98 41 0 chr2 216541282 216541405 -34146449 - FLAM_C SINE Alu -5 128 1 858 175 0 92 chr2 216541405 216541484 -34146370 + MER3 DNA MER1_type 124 209 0 256 220 0 0 chr2 216541441 216541491 -34146363 - MER3 DNA MER1_type -119 90 41 * 3180 217 114 27 chr2 216541509 216542017 -34145837 + L1MC4 LINE L1 6752 7214 -828 1914 150 20 49 chr2 216542017 216542364 -34145490 + MER1B DNA MER1_type 1 337 0 3180 217 114 27 chr2 216542364 216542869 -34144985 + L1MC4 LINE L1 7214 7854 -188 333 148 131 0 chr2 216542874 216542935 -34144919 + MER105 DNA DNA 48 116 -88 263 176 24 129 chr2 216542991 216543073 -34144781 + MLT1C LTR MaLR 1 73 -317 1392 170 32 50 chr2 216543073 216543250 -34144604 + MLT1C LTR MaLR 1 173 -294 2113 137 0 9 chr2 216543250 216543565 -34144289 + AluSx SINE Alu 1 312 0 1392 170 32 50 chr2 216543565 216543669 -34144185 + MLT1C LTR MaLR 173 277 -190 2174 79 0 0 chr2 216543675 216543941 -34143913 - AluSg SINE Alu -44 266 1 23 0 0 0 chr2 216543948 216543971 -34143883 + AT_rich Low_complexity Low_complexity 1 23 0 809 171 146 0 chr2 216544005 216544169 -34143685 + MLT1C LTR MaLR 280 467 0 574 268 15 39 chr2 216544172 216544289 -34143565 + MLT1C LTR MaLR 71 182 -285 2583 45 3 3 chr2 216544289 216544597 -34143257 + AluY SINE Alu 1 308 -3 574 268 15 39 chr2 216544597 216544684 -34143170 + MLT1C LTR MaLR 182 270 -197 2353 110 0 0 chr2 216544693 216545032 -34142822 + AluSx SINE Alu 4 342 0 29 0 0 0 chr2 216545083 216545112 -34142742 + AT_rich Low_complexity Low_complexity 1 29 0 760 228 36 10 chr2 216545112 216545305 -34142549 + MLT1C LTR MaLR 270 467 0 4044 194 75 4 chr2 216545305 216546133 -34141721 + MLT1C-int LTR MaLR 1 887 -484 478 232 70 79 chr2 216546226 216546554 -34141300 + L1ME3 LINE L1 5004 5328 -818 258 153 51 0 chr2 216546563 216546622 -34141232 + L1MB4 LINE L1 6116 6177 -3 2363 78 0 0 chr2 216546643 216546956 -34140898 + AluSg SINE Alu 1 313 0 511 218 9 0 chr2 216546960 216547070 -34140784 + L1ME3 LINE L1 5326 5436 -728 1833 141 3 55 chr2 216547074 216547400 -34140454 - AluJb SINE Alu -1 311 3 323 234 0 13 chr2 216547403 216547480 -34140374 + L1ME3 LINE L1 5602 5677 -487 2837 141 48 30 chr2 216547480 216547976 -34139878 - MLT2B2 LTR ERVL -10 505 1 526 196 228 0 chr2 216547978 216548136 -34139718 + L1ME3 LINE L1 5697 5890 -272 643 146 0 9 chr2 216548139 216548249 -34139605 + AluJb SINE Alu 1 109 -203 318 223 72 0 chr2 216548256 216548340 -34139514 + L1ME3 LINE L1 6029 6119 -47 429 238 124 59 chr2 216548396 216548598 -34139256 - MLT1F1 LTR MaLR 0 567 353 292 186 17 0 chr2 216548715 216548774 -34139080 - MLT1F LTR MaLR -457 85 26 2335 97 0 7 chr2 216548931 216549239 -34138615 + AluSx SINE Alu 1 306 -6 2045 120 40 0 chr2 216549499 216549798 -34138056 - AluSx SINE Alu -1 311 1 1685 164 16 39 chr2 216549980 216550290 -34137564 - AluJo SINE Alu -9 303 1 231 157 284 127 chr2 216550472 216550525 -34137329 - MIR SINE MIR 0 262 219 2144 105 68 31 chr2 216550525 216550876 -34136978 - THE1B LTR MaLR 0 364 1 11215 98 25 2 chr2 216550876 216552421 -34135433 - THE1B-int LTR MaLR 0 1580 1 1901 123 114 24 chr2 216552421 216552755 -34135099 - THE1B LTR MaLR 0 364 1 231 157 284 127 chr2 216552755 216552833 -34135021 - MIR SINE MIR -42 220 108 1961 104 0 4 chr2 216554776 216555027 -34132827 + AluSx SINE Alu 1 250 -62 239 247 148 0 chr2 216555347 216555428 -34132426 + MIR SINE MIR 48 140 -122 739 82 0 0 chr2 216555662 216555760 -34132094 - AluY SINE Alu -11 300 203 7507 90 2 32 chr2 216555797 216555963 -34131891 - MER11C LTR ERVK -14 1057 888 2508 56 0 13 chr2 216555963 216556267 -34131587 - AluY SINE Alu -11 300 1 7507 90 2 32 chr2 216556267 216557190 -34130664 - MER11C LTR ERVK -183 888 1 1719 77 0 0 chr2 216557190 216557399 -34130455 - AluY SINE Alu -102 209 1 1964 146 0 3 chr2 216557405 216557699 -34130155 - AluSx SINE Alu -19 293 1 373 254 17 62 chr2 216557702 216557879 -34129975 - MLT1H LTR MaLR -360 189 21 189 191 38 152 chr2 216557979 216558040 -34129814 + MIR SINE MIR 159 205 -57 2057 132 7 0 chr2 216558040 216558327 -34129527 + AluSx SINE Alu 1 289 -23 189 191 38 152 chr2 216558327 216558370 -34129484 + MIR SINE MIR 205 251 -11 186 377 15 8 chr2 216558416 216558546 -34129308 - L2 LINE L2 -559 2755 2625 4900 119 47 77 chr2 216558562 216559464 -34128390 - THE1C-int LTR MaLR -705 875 1 2476 84 65 8 chr2 216559464 216559819 -34128035 - THE1C LTR MaLR 0 375 1 382 246 78 22 chr2 216559826 216560005 -34127849 - L1 LINE L1 -1810 4336 4148 244 103 103 0 chr2 216560008 216560066 -34127788 + CT-rich Low_complexity Low_complexity 2 65 0 602 169 236 0 chr2 216560073 216560221 -34127633 - L1 LINE L1 -1977 4169 3987 1380 217 16 58 chr2 216560232 216560478 -34127376 - L1MC/D LINE L1 -2138 5670 5448 2418 72 0 20 chr2 216560478 216560784 -34127070 - AluY SINE Alu -11 300 1 1380 217 16 58 chr2 216560784 216560971 -34126883 - L1MC/D LINE L1 -2360 5448 5255 1897 164 7 0 chr2 216561200 216561504 -34126350 - AluSq SINE Alu -7 306 1 183 156 0 0 chr2 216561973 216562005 -34125849 + CT-rich Low_complexity Low_complexity 4 35 0 723 297 103 29 chr2 216562025 216562335 -34125519 - L2 LINE L2 -22 3291 2959 308 279 81 52 chr2 216562464 216562516 -34125338 + HAL1 LINE L1 1004 1053 -1454 1637 195 6 13 chr2 216562516 216562829 -34125025 + AluJb SINE Alu 1 311 -1 308 279 81 52 chr2 216562829 216562912 -34124942 + HAL1 LINE L1 1053 1143 -1364 483 263 55 66 chr2 216562919 216563208 -34124646 + HAL1 LINE L1 1285 1570 -937 284 198 99 0 chr2 216563214 216563305 -34124549 + L1M4 LINE L1 4176 4275 -1871 21 0 0 0 chr2 216563330 216563351 -34124503 + AT_rich Low_complexity Low_complexity 1 21 0 528 161 188 0 chr2 216563795 216563907 -34123947 + AluJo SINE Alu 1 133 -169 521 135 0 0 chr2 216563907 216563981 -34123873 + AluJo SINE Alu 133 206 -106 1295 157 15 54 chr2 216563981 216564242 -34123612 - AluJo SINE Alu -58 254 4 240 167 278 0 chr2 216564244 216564298 -34123556 + Tigger7 DNA MER2_type 2418 2486 -1 990 211 56 3 chr2 216564298 216564583 -34123271 - L1MEc LINE L1 -3943 2453 2154 698 313 35 17 chr2 216564614 216564959 -34122895 - L1MEc LINE L1 -5930 466 116 535 161 0 0 chr2 216565211 216565298 -34122556 - FLAM_A SINE Alu -16 126 40 319 277 62 98 chr2 216565694 216566531 -34121323 + L1ME4a LINE L1 404 1210 -4995 3130 221 19 66 chr2 216567213 216568015 -34119839 + MLT-int LTR MaLR 205 968 -767 2376 196 56 32 chr2 216568035 216568571 -34119283 + MLT1A1-int LTR MaLR 1180 1728 -7 1623 170 112 6 chr2 216568577 216568907 -34118947 + MLT1A1 LTR MaLR 1 365 0 650 285 142 35 chr2 216568927 216569587 -34118267 + L1ME4a LINE L1 1426 2156 -4240 427 254 0 0 chr2 216569589 216569711 -34118143 + L1ME4a LINE L1 3208 3329 -2886 * 495 270 85 72 chr2 216569690 216569749 -34118105 + L1ME4a LINE L1 3867 3924 -2291 2184 109 10 3 chr2 216569749 216570053 -34117801 + AluSx SINE Alu 1 306 -6 495 270 85 72 chr2 216570053 216570675 -34117179 + L1ME4a LINE L1 3924 4598 -1617 1658 153 0 15 chr2 216571404 216571692 -34116162 - AluJo SINE Alu 0 308 25 500 291 112 29 chr2 216572094 216572335 -34115519 - MIR SINE MIR 0 262 2 1680 182 13 19 chr2 216573085 216573392 -34114462 + AluJo SINE Alu 5 309 -3 313 283 117 31 chr2 216574547 216574770 -34113084 + L1M4 LINE L1 4405 4646 -1500 26 0 0 0 chr2 216575333 216575359 -34112495 + AT_rich Low_complexity Low_complexity 1 26 0 329 223 39 39 chr2 216575525 216575628 -34112226 + L1ME4a LINE L1 4572 4674 -1541 445 256 222 24 chr2 216575856 216576063 -34111791 - MIR SINE MIR 0 262 15 384 271 152 4 chr2 216576564 216576808 -34111046 + L1ME4a LINE L1 5686 5965 -225 865 235 55 47 chr2 216576861 216577265 -34110589 + L1MC5 LINE L1 7525 7931 -30 1977 150 3 0 chr2 216577763 216578057 -34109797 + AluJb SINE Alu 1 295 -17 225 240 219 41 chr2 216578191 216578337 -34109517 - L2 LINE L2 -19 3294 3123 2079 144 0 0 chr2 216578337 216578628 -34109226 + AluJo SINE Alu 1 291 -21 561 220 163 7 chr2 216578805 216578946 -34108908 - MER5A DNA MER1_type -1 188 26 2005 142 3 0 chr2 216579040 216579343 -34108511 + AluSx SINE Alu 1 304 -8 1292 203 222 11 chr2 216579511 216579970 -34107884 + L1MC4 LINE L1 7473 8028 -14 208 288 15 30 chr2 216580654 216580720 -34107134 + L2 LINE L2 3207 3271 -1 21 0 0 0 chr2 216580952 216580973 -34106881 + AT_rich Low_complexity Low_complexity 1 21 0 2457 30 0 30 chr2 216580981 216581281 -34106573 + AluY SINE Alu 1 291 -20 459 237 90 40 chr2 216582725 216582902 -34104952 - MIR SINE MIR -1 261 76 24 53 0 0 chr2 216583429 216583467 -34104387 + AT_rich Low_complexity Low_complexity 1 38 0 622 236 113 37 chr2 216584293 216584675 -34103179 + HAL1 LINE L1 891 1301 -1206 206 32 32 0 chr2 216585337 216585368 -34102486 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 198 0 0 0 chr2 216586393 216586415 -34101439 + (A)n Simple_repeat Simple_repeat 1 22 0 268 219 151 0 chr2 216587003 216587076 -34100778 - MER63 DNA MER1_type 0 1060 977 388 254 57 49 chr2 216587079 216587201 -34100653 - MER63 DNA MER1_type -313 749 1 2476 68 0 3 chr2 216587748 216588056 -34099798 + AluY SINE Alu 1 307 -4 791 208 177 19 chr2 216588189 216588454 -34099400 - MER46C DNA MER2_type -27 311 5 651 86 38 48 chr2 216588986 216589091 -34098763 + FRAM SINE Alu 47 150 -26 21 0 0 0 chr2 216589102 216589123 -34098731 + AT_rich Low_complexity Low_complexity 1 21 0 2334 76 0 3 chr2 216589253 216589544 -34098310 - AluSg1 SINE Alu -19 290 1 227 56 56 0 chr2 216592182 216592218 -34095636 + (CATA)n Simple_repeat Simple_repeat 1 38 0 180 0 0 0 chr2 216592494 216592514 -34095340 + (TTG)n Simple_repeat Simple_repeat 2 21 0 204 248 87 101 chr2 216593939 216594088 -34093766 + MIR SINE MIR 66 212 -50 351 283 94 58 chr2 216594132 216594323 -34093531 - MIR SINE MIR -16 246 49 831 73 89 0 chr2 216595993 216596117 -34091737 - MER85 DNA T2_type 0 139 5 2251 113 7 0 chr2 216596774 216597084 -34090770 + AluSx SINE Alu 1 312 0 180 0 0 0 chr2 216597393 216597413 -34090441 + (TGGGGG)n Simple_repeat Simple_repeat 5 24 0 1658 193 3 7 chr2 216597676 216597971 -34089883 + AluJo SINE Alu 3 296 -16 441 160 27 0 chr2 216598561 216598636 -34089218 + AluJ/FRAM SINE Alu 220 296 -16 306 236 125 49 chr2 216599216 216599360 -34088494 - L2 LINE L2 0 3313 3159 410 217 32 129 chr2 216599542 216599759 -34088095 - L2 LINE L2 -753 2561 2366 679 185 15 15 chr2 216600178 216600308 -34087546 - FLAM_C SINE Alu -3 130 1 2470 53 10 3 chr2 216600430 216600734 -34087120 + AluY SINE Alu 1 306 -5 518 139 0 0 chr2 216601022 216601101 -34086753 + AluJ/FLAM SINE Alu 1 79 -233 3308 226 179 33 chr2 216601101 216601218 -34086636 - Charlie1a DNA MER1_type -1342 1419 1320 1370 167 49 21 chr2 216601218 216601506 -34086348 + AluJo SINE Alu 4 299 -13 3308 226 179 33 chr2 216601506 216602626 -34085228 - Charlie1a DNA MER1_type -1441 1320 1 1378 193 28 55 chr2 216602837 216603127 -34084727 + AluJo SINE Alu 1 282 -30 189 0 0 0 chr2 216603133 216603154 -34084700 + (CAA)n Simple_repeat Simple_repeat 1 21 0 689 201 91 70 chr2 216603751 216603889 -34083965 + MER3 DNA MER1_type 7 152 -57 1482 151 0 0 chr2 216603889 216604108 -34083746 - AluSg/x SINE Alu -18 292 74 689 201 91 70 chr2 216604108 216604168 -34083686 + MER3 DNA MER1_type 152 209 0 822 132 7 29 chr2 216604256 216604392 -34083462 + FLAM_C SINE Alu 1 133 0 472 315 241 8 chr2 216604620 216605014 -34082840 - L2 LINE L2 -4 3309 2824 281 248 76 9 chr2 216605429 216605534 -34082320 - MIR SINE MIR -73 135 24 429 270 208 0 chr2 216605639 216605817 -34082037 - MIR SINE MIR 0 262 48 2198 123 3 0 chr2 216605823 216606131 -34081723 + AluSx SINE Alu 1 309 -3 2257 114 3 0 chr2 216606226 216606532 -34081322 + AluSg SINE Alu 1 307 -3 320 257 128 9 chr2 216606917 216607026 -34080828 + MLT1J2 LTR MaLR 319 440 -10 963 183 115 10 chr2 216607589 216607797 -34080057 - MIR SINE MIR -25 237 8 556 253 45 60 chr2 216608994 216609259 -34078595 - MER102b DNA MER1_type 0 341 81 259 295 39 47 chr2 216609696 216609825 -34078029 + MIR SINE MIR 61 188 -74 281 358 89 0 chr2 216610054 216610177 -34077677 - L2 LINE L2 0 3272 3139 506 245 128 20 chr2 216610325 216610521 -34077333 + MIR SINE MIR 45 261 -1 22 0 0 0 chr2 216611084 216611106 -34076748 + AT_rich Low_complexity Low_complexity 1 22 0 206 228 76 38 chr2 216611197 216611276 -34076578 + MIR SINE MIR 58 139 -69 754 223 55 10 chr2 216611425 216611627 -34076227 - MIR SINE MIR -5 257 47 510 193 59 17 chr2 216611659 216611778 -34076076 + MIR3 SINE MIR 61 184 -24 554 211 211 0 chr2 216612628 216612799 -34075055 + MIR SINE MIR 56 262 0 3137 157 73 16 chr2 216612856 216613474 -34074380 + MER39B LTR ERV1 1 653 0 5884 96 56 21 chr2 216613690 216615175 -34072679 + pTR5 LTR ERV1 739 2438 0 222 118 0 0 chr2 216617902 216617936 -34069918 + (CA)n Simple_repeat Simple_repeat 2 35 0 23 33 0 0 chr2 216618795 216618825 -34069029 + AT_rich Low_complexity Low_complexity 1 30 0 256 363 88 25 chr2 216619582 216619786 -34068068 + MIR SINE MIR 35 251 -11 223 281 22 0 chr2 216619858 216619947 -34067907 + A-rich Low_complexity Low_complexity 6 96 0 966 143 70 83 chr2 216620040 216620270 -34067584 - MER46A DNA MER2_type -9 227 1 21 71 0 0 chr2 216622320 216622362 -34065492 + AT_rich Low_complexity Low_complexity 1 42 0 727 132 0 0 chr2 216622367 216622473 -34065381 - FLAM_A SINE Alu -20 122 17 22 35 0 0 chr2 216625293 216625322 -34062532 + AT_rich Low_complexity Low_complexity 1 29 0 1906 149 0 39 chr2 216625478 216625787 -34062067 - AluSx SINE Alu -15 297 1 24 0 0 0 chr2 216626926 216626950 -34060904 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr2 216627120 216627148 -34060706 + AT_rich Low_complexity Low_complexity 1 28 0 198 143 0 0 chr2 216629996 216630031 -34057823 + (A)n Simple_repeat Simple_repeat 1 35 0 194 333 100 11 chr2 216630694 216630784 -34057070 + L2 LINE L2 3208 3305 -8 24 67 0 0 chr2 216631150 216631195 -34056659 + AT_rich Low_complexity Low_complexity 1 45 0 489 225 93 8 chr2 216631944 216632073 -34055781 - MIR3 SINE MIR -3 205 66 2110 107 4 0 chr2 216633200 216633521 -34054333 - AluSx SINE Alu 0 323 2 2178 108 0 0 chr2 216635564 216635851 -34052003 - AluSx SINE Alu -25 287 1 511 237 67 7 chr2 216637919 216638054 -34049800 + MIR SINE MIR 105 247 -15 200 35 35 0 chr2 216639871 216639900 -34047954 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 737 223 103 47 chr2 216640014 216640247 -34047607 + MIR SINE MIR 6 251 -11 198 103 0 0 chr2 216641450 216641479 -34046375 + (TCTA)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr2 216643365 216643393 -34044461 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr2 216647382 216647414 -34040440 + AT_rich Low_complexity Low_complexity 1 32 0 241 267 0 27 chr2 216647690 216647765 -34040089 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 186 286 0 0 chr2 216648926 216648968 -34038886 - L3 LINE CR1 -4 1573 1532 475 90 0 10 chr2 216649097 216649353 -34038501 + AluSg SINE Alu 1 301 -11 1300 144 0 5 chr2 216649476 216649664 -34038190 - AluJo SINE Alu -125 187 1 1212 218 85 65 chr2 216649675 216650015 -34037839 - L1MC5 LINE L1 -143 7818 7486 2448 61 3 3 chr2 216650015 216650311 -34037543 - AluSc SINE Alu -13 296 1 1212 218 85 65 chr2 216650311 216650667 -34037187 - L1MC5 LINE L1 -475 7486 7108 201 292 0 0 chr2 216650722 216650770 -34037084 - MER5B DNA MER1_type -128 50 3 467 327 109 28 chr2 216650816 216651064 -34036790 - L3 LINE CR1 -112 1465 1198 379 176 0 19 chr2 216651512 216651620 -34036234 + GA-rich Low_complexity Low_complexity 1 106 0 3585 143 36 20 chr2 216652413 216653056 -34034798 + MER39B LTR ERV1 1 653 0 185 364 173 9 chr2 216653388 216653498 -34034356 + L2 LINE L2 3102 3229 -43 231 36 0 0 chr2 216653703 216653731 -34034123 + (TC)n Simple_repeat Simple_repeat 1 28 0 213 39 0 0 chr2 216653730 216653756 -34034098 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 23 54 0 0 chr2 216656281 216656318 -34031536 + AT_rich Low_complexity Low_complexity 1 37 0 203 191 24 0 chr2 216657178 216657220 -34030634 + (CAA)n Simple_repeat Simple_repeat 2 44 0 1442 213 18 46 chr2 216658043 216658159 -34029695 + MLT1E2 LTR MaLR 136 254 -372 573 0 0 48 chr2 216658159 216658242 -34029612 + L1PA2 LINE L1 6077 6155 0 1442 213 18 46 chr2 216658242 216658514 -34029340 + MLT1E2 LTR MaLR 254 513 -113 2002 129 7 0 chr2 216658774 216659054 -34028800 + AluSx SINE Alu 1 282 -30 189 0 0 0 chr2 216659058 216659079 -34028775 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 423 0 0 0 chr2 216659078 216659125 -34028729 + (TA)n Simple_repeat Simple_repeat 2 48 0 2081 124 16 13 chr2 216661375 216661682 -34026172 - AluSx SINE Alu -4 308 1 715 264 85 57 chr2 216662668 216663221 -34024633 + L1ME3A LINE L1 791 1396 -4914 2205 121 0 3 chr2 216663221 216663528 -34024326 + AluSg SINE Alu 1 306 -4 715 264 85 57 chr2 216663528 216663607 -34024247 + L1ME3A LINE L1 1396 1471 -4839 29 49 0 16 chr2 216663613 216663642 -34024212 + AT_rich Low_complexity Low_complexity 1 29 -31 1814 161 14 0 chr2 216663642 216663927 -34023927 - AluJb SINE Alu -23 289 1 29 49 0 16 chr2 216663927 216663958 -34023896 + AT_rich Low_complexity Low_complexity 29 60 0 2294 91 10 3 chr2 216663960 216664256 -34023598 + AluSp SINE Alu 1 298 -15 367 303 29 29 chr2 216664260 216664574 -34023280 + L1ME3A LINE L1 3100 3413 -2716 1717 162 10 20 chr2 216664690 216664986 -34022868 + AluJb SINE Alu 4 296 -16 2356 97 0 0 chr2 216665040 216665338 -34022516 + AluSq SINE Alu 1 298 -15 1020 260 23 91 chr2 216665643 216666305 -34021549 + L1ME3A LINE L1 3652 4268 -1861 * 2140 253 107 26 chr2 216666278 216667082 -34020772 + L1ME3A LINE L1 5276 6144 -9 1886 160 3 31 chr2 216668420 216668739 -34019115 - AluJo SINE Alu -2 310 1 185 224 17 0 chr2 216669521 216669579 -34018275 + (TA)n Simple_repeat Simple_repeat 2 60 0 184 314 43 0 chr2 216670238 216670308 -34017546 - L2 LINE L2 0 3272 3200 274 245 74 68 chr2 216670369 216670532 -34017322 - L2 LINE L2 -71 3242 3079 2935 157 37 7 chr2 216670750 216671291 -34016563 + MER89 LTR ERV1 3 559 0 494 319 51 40 chr2 216671529 216671924 -34015930 + L1ME4a LINE L1 5510 5908 -213 252 0 0 0 chr2 216671934 216671962 -34015892 + (TG)n Simple_repeat Simple_repeat 2 29 0 282 264 83 8 chr2 216671984 216672105 -34015749 + L1ME4a LINE L1 5992 6121 0 1456 86 25 15 chr2 216672506 216672704 -34015150 - MER1B DNA MER1_type 0 339 140 358 172 0 0 chr2 216672712 216672770 -34015084 - MER1B DNA MER1_type -279 58 1 797 149 5 154 chr2 216672777 216672896 -34014958 - MER5A DNA MER1_type -23 166 86 771 185 0 0 chr2 216672896 216673026 -34014828 - FLAM_C SINE Alu -3 130 1 797 149 5 154 chr2 216673026 216673101 -34014753 - MER5A DNA MER1_type -103 86 1 2065 132 0 10 chr2 216673975 216674286 -34013568 - AluSx SINE Alu -4 308 1 863 143 104 70 chr2 216674414 216674644 -34013210 - L1ME2 LINE L1 -8 6156 5919 862 194 61 11 chr2 216674728 216674908 -34012946 + MER5A DNA MER1_type 1 189 0 1100 23 0 0 chr2 216674967 216675099 -34012755 + L1PA4 LINE L1 6021 6152 -3 243 0 0 0 chr2 216676080 216676107 -34011747 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 336 24 0 0 chr2 216676106 216676147 -34011707 + (GA)n Simple_repeat Simple_repeat 2 42 0 288 346 37 9 chr2 216676684 216676791 -34011063 - MIR3 SINE MIR -93 115 6 396 329 13 32 chr2 216677612 216677770 -34010084 - MIR SINE MIR -48 214 60 238 254 0 0 chr2 216678127 216678186 -34009668 - L1MC4 LINE L1 -1336 6706 6648 184 352 57 0 chr2 216678494 216678582 -34009272 - MIR SINE MIR -135 127 35 24 31 0 77 chr2 216679235 216679300 -34008554 + AT_rich Low_complexity Low_complexity 1 60 0 957 113 15 0 chr2 216679345 216679478 -34008376 - AluSq/x SINE Alu -178 135 1 425 270 108 14 chr2 216679503 216679651 -34008203 - MIR SINE MIR -56 206 45 567 321 48 44 chr2 216679972 216680221 -34007633 - MIR SINE MIR -12 250 1 21 0 0 0 chr2 216680760 216680781 -34007073 + AT_rich Low_complexity Low_complexity 1 21 0 389 207 9 72 chr2 216681399 216681419 -34006435 - Charlie2a DNA MER1_type -7 2855 2835 433 117 36 81 chr2 216681419 216681530 -34006324 - L1PA13 LINE L1 -3 6160 6055 389 207 9 72 chr2 216681530 216681620 -34006234 - Charlie2a DNA MER1_type -27 2835 2752 * 1055 203 69 7 chr2 216681608 216681884 -34005970 - Charlie2a DNA MER1_type -1842 1020 728 318 269 46 0 chr2 216681903 216682011 -34005843 - Charlie2a DNA MER1_type -2356 426 314 477 0 0 0 chr2 216683400 216683453 -34004401 + (TG)n Simple_repeat Simple_repeat 2 54 0 22 35 0 0 chr2 216685739 216685768 -34002086 + AT_rich Low_complexity Low_complexity 1 29 0 2772 92 17 2 chr2 216685860 216686273 -34001581 + L1MA5 LINE L1 5876 6294 -6 2343 106 0 0 chr2 216686461 216686762 -34001092 - AluSx SINE Alu -9 303 3 630 272 147 33 chr2 216686876 216687360 -34000494 - L1MC/D LINE L1 -351 5770 5271 1784 175 3 0 chr2 216688038 216688323 -33999531 - AluJo SINE Alu -26 286 1 21 0 0 0 chr2 216688746 216688767 -33999087 + AT_rich Low_complexity Low_complexity 1 21 0 1452 111 21 145 chr2 216688993 216689318 -33998536 + LTR12 LTR ERV1 1 285 -429 330 253 11 0 chr2 216689318 216689409 -33998445 + LTR30 LTR ERV1 552 643 -79 741 128 0 0 chr2 216689409 216689511 -33998343 + LTR12 LTR ERV1 613 714 0 4321 242 30 33 chr2 216689579 216690767 -33997087 + L1M4 LINE L1 16 1200 -5342 25 95 0 0 chr2 216690767 216690841 -33997013 + AT_rich Low_complexity Low_complexity 1 74 0 780 263 57 18 chr2 216690876 216691211 -33996643 + L1M4 LINE L1 2608 2955 -3689 2126 174 37 118 chr2 216691212 216691676 -33996178 + L1M4 LINE L1 4759 5168 -1010 285 57 0 0 chr2 216691676 216691711 -33996143 + U2 snRNA snRNA 2 36 -152 2126 174 37 118 chr2 216691711 216692015 -33995839 + L1M4 LINE L1 5168 5495 -683 491 185 170 22 chr2 216692033 216692168 -33995686 - MER5B DNA MER1_type -22 156 2 2333 102 0 0 chr2 216693690 216693993 -33993861 + AluSx SINE Alu 1 303 -9 1324 126 0 0 chr2 216694633 216694815 -33993039 - AluSq SINE Alu -15 298 117 220 263 70 0 chr2 216696467 216696524 -33991330 + MIR3 SINE MIR 108 168 -40 227 221 41 110 chr2 216696554 216696699 -33991155 + HAL1b LINE L1 1187 1321 -27 375 281 5 112 chr2 216697753 216697949 -33989905 + MIR SINE MIR 38 212 -50 357 277 58 29 chr2 216698003 216698140 -33989714 + MIR3 SINE MIR 3 143 -65 257 328 144 28 chr2 216698353 216698749 -33989105 + L2 LINE L2 1868 2309 -1005 31 58 0 0 chr2 216698755 216698807 -33989047 + AT_rich Low_complexity Low_complexity 1 52 0 1698 131 22 0 chr2 216698809 216699083 -33988771 - L1MA4A LINE L1 -17 6286 6007 2208 52 4 7 chr2 216699387 216699656 -33988198 - AluY SINE Alu -4 307 40 223 350 16 32 chr2 216699680 216699803 -33988051 + L2 LINE L2 2985 3105 -167 438 263 27 32 chr2 216699821 216700050 -33987804 + L1MC4a LINE L1 5661 5819 -302 297 0 0 0 chr2 216700135 216700168 -33987686 + (CA)n Simple_repeat Simple_repeat 2 34 0 278 183 0 0 chr2 216700411 216700460 -33987394 + MIR SINE MIR 58 106 -102 681 304 19 10 chr2 216701649 216701856 -33985998 - MIR SINE MIR -28 234 26 22 0 0 0 chr2 216702432 216702454 -33985400 + AT_rich Low_complexity Low_complexity 1 22 0 339 333 29 7 chr2 216702455 216702593 -33985261 - MIR3 SINE MIR -38 170 30 31 0 0 0 chr2 216703633 216703664 -33984190 + AT_rich Low_complexity Low_complexity 1 31 0 963 123 95 17 chr2 216703667 216703846 -33984008 + THE1C LTR MaLR 183 375 0 189 0 0 0 chr2 216704147 216704168 -33983686 + (A)n Simple_repeat Simple_repeat 1 21 0 231 333 93 70 chr2 216707218 216707603 -33980251 + L2 LINE L2 2919 3312 -1 206 367 61 10 chr2 216707734 216707832 -33980022 - L2 LINE L2 -197 3075 2973 227 224 20 0 chr2 216708032 216708081 -33979773 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 229 182 0 0 chr2 216708501 216708556 -33979298 + L1ME4a LINE L1 6062 6116 -5 1948 175 168 23 chr2 216709145 216709586 -33978268 - MLT1D LTR MaLR 0 505 1 1024 153 6 12 chr2 216710962 216711125 -33976729 + MLT1E LTR MaLR 432 593 0 784 48 14 62 chr2 216711146 216711435 -33976419 + (TA)n Simple_repeat Simple_repeat 1 275 0 288 0 0 0 chr2 216711465 216711497 -33976357 + (CA)n Simple_repeat Simple_repeat 1 32 0 1732 165 54 27 chr2 216711538 216711872 -33975982 - MER2 DNA MER2_type -1 343 1 360 0 0 0 chr2 216711873 216711913 -33975941 + (CA)n Simple_repeat Simple_repeat 2 41 0 10389 122 14 19 chr2 216711920 216712875 -33974979 - Tigger1 DNA MER2_type 0 2418 1459 2429 64 0 10 chr2 216712875 216713173 -33974681 - AluY SINE Alu -16 295 1 10389 122 14 19 chr2 216713173 216714644 -33973210 - Tigger1 DNA MER2_type -959 1459 1 1483 178 4 0 chr2 216715327 216715591 -33972263 - L1MC1 LINE L1 -6 6327 6063 4347 77 25 7 chr2 216715721 216716333 -33971521 + L1MA1 LINE L1 5680 6302 0 1180 270 63 31 chr2 216716366 216717037 -33970817 + L1ME3A LINE L1 2899 3590 -2556 333 213 92 117 chr2 216717067 216717349 -33970505 + L1ME3A LINE L1 4450 4724 -1422 * 1050 251 44 6 chr2 216717324 216717639 -33970215 + L1ME3A LINE L1 5839 6165 -5 574 217 153 19 chr2 216720124 216720281 -33967573 + MER5A DNA MER1_type 4 181 -8 249 281 265 40 chr2 216722508 216722832 -33965022 + L2 LINE L2 2459 2855 -459 470 286 80 11 chr2 216724012 216724187 -33963667 - MIR SINE MIR 0 262 76 1208 256 75 87 chr2 216724189 216724813 -33963041 + HsTC2 DNA Tc2 1 1771 -127 820 115 107 0 chr2 216724820 216724942 -33962912 + AluSx SINE Alu 1 135 -177 2951 55 5 3 chr2 216724942 216725326 -33962528 + L1PA7 LINE L1 5770 6154 0 1354 97 0 0 chr2 216726022 216726207 -33961647 + AluSx SINE Alu 121 305 -7 366 195 11 11 chr2 216726243 216726330 -33961524 + HsTC2 DNA Tc2 1782 1868 -30 1861 203 51 70 chr2 216727218 216727479 -33960375 + MLT1D LTR MaLR 1 249 -256 2200 90 10 10 chr2 216727479 216727779 -33960075 + AluSp SINE Alu 1 300 -13 1861 203 51 70 chr2 216727779 216728030 -33959824 + MLT1D LTR MaLR 249 503 -2 277 390 22 0 chr2 216728030 216728166 -33959688 - L2 LINE L2 -237 3035 2897 21 36 0 0 chr2 216728356 216728384 -33959470 + AT_rich Low_complexity Low_complexity 1 28 0 850 147 7 15 chr2 216728384 216728520 -33959334 - AluJo SINE Alu -175 137 3 41 77 0 23 chr2 216728567 216728697 -33959157 + AT_rich Low_complexity Low_complexity 1 127 0 2118 110 7 29 chr2 216728755 216729063 -33958791 + AluSq SINE Alu 1 301 -12 183 314 100 50 chr2 216729357 216729497 -33958357 + L2 LINE L2 2966 3112 -160 3730 78 6 0 chr2 216729752 216730251 -33957603 - L1PA10 LINE L1 -5 6163 5662 571 104 31 21 chr2 216730251 216730342 -33957512 - L1PA10 LINE L1 -1140 5006 4915 1763 148 24 51 chr2 216730921 216731085 -33956769 + L1MB1 LINE L1 5808 5975 -193 2398 92 0 10 chr2 216731085 216731391 -33956463 + AluY SINE Alu 1 303 -8 1763 148 24 51 chr2 216731391 216731597 -33956257 + L1MB1 LINE L1 5975 6168 0 2365 86 3 0 chr2 216732553 216732856 -33954998 + AluY SINE Alu 1 304 -7 234 0 0 0 chr2 216733166 216733192 -33954662 + (TG)n Simple_repeat Simple_repeat 1 26 0 190 314 198 12 chr2 216738572 216738658 -33949196 - MIR SINE MIR -141 121 20 * 202 276 0 17 chr2 216738652 216738710 -33949144 - L2 LINE L2 -93 3220 3164 854 180 12 29 chr2 216738772 216738944 -33948910 + L1PB3 LINE L1 5986 6154 0 216 97 0 0 chr2 216740816 216740847 -33947007 + (CA)n Simple_repeat Simple_repeat 1 31 0 673 289 24 52 chr2 216741511 216741760 -33946094 + MIR SINE MIR 8 249 -13 1441 123 52 5 chr2 216742597 216742808 -33945046 + AluSg/x SINE Alu 73 293 -19 242 333 79 75 chr2 216743783 216744035 -33943819 + L2 LINE L2 2838 3090 -182 383 147 40 0 chr2 216745975 216746050 -33941804 - MER116 DNA Mariner 0 80 3 301 279 125 107 chr2 216747182 216747501 -33940353 + L1MEd LINE L1 323 647 -5472 624 275 12 25 chr2 216747504 216747664 -33940190 - MER5A DNA MER1_type -6 183 26 640 216 91 118 chr2 216747667 216747736 -33940118 + L1MEd LINE L1 626 695 -5424 1160 113 0 0 chr2 216747736 216747913 -33939941 + L1MA4 LINE L1 6118 6294 -6 640 216 91 118 chr2 216747913 216748205 -33939649 + L1MEd LINE L1 695 993 -5126 688 224 180 0 chr2 216748205 216748251 -33939603 - MER20 DNA MER1_type 0 219 183 297 0 0 0 chr2 216748251 216748284 -33939570 + (TC)n Simple_repeat Simple_repeat 2 34 0 * 396 0 0 0 chr2 216748283 216748327 -33939527 + (TG)n Simple_repeat Simple_repeat 1 44 0 688 224 180 0 chr2 216748284 216748463 -33939391 - MER20 DNA MER1_type -36 183 4 640 216 91 118 chr2 216748463 216748693 -33939161 + L1MEd LINE L1 993 1202 -4917 246 250 96 10 chr2 216748856 216748960 -33938894 + L1M2 LINE L1 2419 2531 -4318 2264 47 68 0 chr2 216749218 216749497 -33938357 - AluY SINE Alu -13 298 1 9382 155 10 32 chr2 216749543 216752547 -33935307 + L1PA8A LINE L1 23 3017 -3444 15396 118 15 3 chr2 216752551 216755761 -33932093 + L1PA8A LINE L1 3235 6446 0 687 316 60 27 chr2 216755986 216756094 -33931760 + L1M2 LINE L1 2812 2915 -3933 1829 154 47 0 chr2 216756094 216756392 -33931462 - AluSx SINE Alu 0 312 1 687 316 60 27 chr2 216756392 216756912 -33930942 + L1M2 LINE L1 2915 3461 -3387 753 275 135 7 chr2 216756924 216757494 -33930360 + L1M2 LINE L1 3510 4152 -2696 291 316 15 15 chr2 216757530 216757663 -33930191 + L1M2 LINE L1 5264 5396 -1452 2079 128 0 7 chr2 216757728 216758017 -33929837 + AluSx SINE Alu 1 287 -25 348 64 0 0 chr2 216758022 216758069 -33929785 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 589 290 126 36 chr2 216758071 216759106 -33928748 + L1ME3A LINE L1 5519 6654 -218 252 86 0 0 chr2 216759323 216759358 -33928496 + (TTTTA)n Simple_repeat Simple_repeat 5 39 0 6517 86 14 10 chr2 216759358 216760336 -33927518 - L1PA10 LINE L1 -20 6148 5170 823 126 0 8 chr2 216760351 216760478 -33927376 + L1M2 LINE L1 5683 5808 -483 437 226 47 0 chr2 216760772 216760878 -33926976 - MER94 DNA DNA -21 113 3 185 153 0 34 chr2 216761742 216761801 -33926053 + (TATATG)n Simple_repeat Simple_repeat 6 62 0 234 275 18 9 chr2 216761804 216761913 -33925941 + (TA)n Simple_repeat Simple_repeat 1 110 0 212 167 0 24 chr2 216762396 216762438 -33925416 + (CCA)n Simple_repeat Simple_repeat 2 42 0 238 297 34 34 chr2 216762650 216762768 -33925086 - L3 LINE CR1 -104 1473 1356 221 268 0 0 chr2 216763246 216763302 -33924552 + L2 LINE L2 3258 3313 0 434 274 198 10 chr2 216764789 216764986 -33922868 - MIR SINE MIR 0 262 29 307 240 78 39 chr2 216766198 216766377 -33921477 + L1MC5 LINE L1 7741 7926 -35 251 311 44 11 chr2 216767463 216767553 -33920301 - MIR SINE MIR -13 249 157 414 196 15 23 chr2 216768787 216768920 -33918934 + GA-rich Low_complexity Low_complexity 2 133 0 1194 249 19 28 chr2 216769521 216769883 -33917971 - MLT1A2 LTR MaLR -15 359 1 1739 181 0 40 chr2 216769918 216770239 -33917615 + AluJo SINE Alu 4 311 -1 966 133 0 17 chr2 216770267 216770448 -33917406 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 457 321 253 13 chr2 216770680 216771154 -33916700 + L3 LINE CR1 113 700 -877 207 162 0 0 chr2 216771211 216771248 -33916606 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 963 350 64 42 chr2 216771445 216772105 -33915749 + L3 LINE CR1 893 1566 -11 202 328 0 0 chr2 216772152 216772213 -33915641 + L2 LINE L2 3207 3267 -5 2235 85 20 0 chr2 216773168 216773514 -33914340 + AluSc SINE Alu 1 352 0 23 0 0 0 chr2 216773936 216773959 -33913895 + AT_rich Low_complexity Low_complexity 1 23 0 275 330 107 95 chr2 216774524 216775218 -33912636 + L2 LINE L2 2498 3250 -22 1813 84 0 0 chr2 216775911 216776138 -33911716 - AluY SINE Alu -84 227 1 743 274 39 87 chr2 216776557 216776747 -33911107 + L1ME4a LINE L1 5498 5695 -426 2485 57 0 0 chr2 216776747 216777044 -33910810 + AluY SINE Alu 1 297 -14 743 274 39 87 chr2 216777044 216777488 -33910366 + L1ME4a LINE L1 5695 6102 -19 343 277 78 7 chr2 216778715 216778856 -33908998 - L2 LINE L2 0 3313 3163 180 0 0 0 chr2 216781521 216781541 -33906313 + (T)n Simple_repeat Simple_repeat 1 20 0 1204 140 10 5 chr2 216782503 216782703 -33905151 - L1PB1 LINE L1 0 6151 5951 203 218 36 0 chr2 216787753 216787808 -33900046 + (CATAA)n Simple_repeat Simple_repeat 4 60 0 396 306 38 45 chr2 216789741 216789898 -33897956 + MIR SINE MIR 47 202 -60 988 261 56 70 chr2 216790118 216790563 -33897291 + LTR16A LTR ERVL 12 450 0 2122 126 33 0 chr2 216790618 216790951 -33896903 - MER46B DNA MER2_type -1 235 17 501 265 159 0 chr2 216790955 216791106 -33896748 + MIR SINE MIR 46 220 -42 48 43 0 0 chr2 216791114 216791183 -33896671 + AT_rich Low_complexity Low_complexity 1 69 0 327 309 6 122 chr2 216791187 216791368 -33896486 - MER91A DNA MER1_type -2 194 35 21 71 0 0 chr2 216791846 216791888 -33895966 + AT_rich Low_complexity Low_complexity 1 42 0 1510 184 25 92 chr2 216793389 216793790 -33894064 + MLT1A2 LTR MaLR 1 374 0 351 149 0 0 chr2 216794175 216794249 -33893605 + (TCC)n Simple_repeat Simple_repeat 1 74 0 184 133 191 105 chr2 216794724 216794829 -33893025 - MIR SINE MIR -58 204 91 475 290 133 43 chr2 216796359 216796614 -33891240 + L3 LINE CR1 1293 1570 -7 29 0 0 0 chr2 216797307 216797336 -33890518 + AT_rich Low_complexity Low_complexity 1 29 0 958 184 69 0 chr2 216798144 216798318 -33889536 + MER5A DNA MER1_type 2 187 -2 526 297 27 7 chr2 216798512 216798660 -33889194 - MER5B DNA MER1_type -26 152 2 264 252 187 19 chr2 216798981 216799088 -33888766 + MIR SINE MIR 88 212 -50 2352 56 0 36 chr2 216800272 216800576 -33887278 + AluY SINE Alu 1 293 -18 185 310 0 0 chr2 216801350 216801408 -33886446 + L2 LINE L2 2599 2656 -658 194 306 41 101 chr2 216801416 216801707 -33886147 - L2 LINE L2 -231 3041 2752 21 0 0 0 chr2 216802354 216802375 -33885479 + AT_rich Low_complexity Low_complexity 1 21 0 317 280 116 29 chr2 216802376 216802459 -33885395 - MER112 DNA MER1_type -28 232 158 2353 62 0 34 chr2 216802459 216802779 -33885075 + AluY SINE Alu 2 310 -1 317 280 116 29 chr2 216802779 216802902 -33884952 - MER112 DNA MER1_type -102 158 8 228 234 31 0 chr2 216803036 216803100 -33884754 - HsTC2 DNA Tc2 -1601 297 232 410 324 16 14 chr2 216803297 216803552 -33884302 + L2 LINE L2 2545 2861 -453 292 152 0 0 chr2 216803554 216803600 -33884254 + LTR41 LTR ERVL 1 46 -727 406 304 9 9 chr2 216804263 216804375 -33883479 + MER5A DNA MER1_type 50 161 -28 1877 98 4 0 chr2 216806293 216806537 -33881317 - AluSq SINE Alu -68 245 1 2435 70 3 0 chr2 216807155 216807453 -33880401 + AluY SINE Alu 1 299 -12 21 57 0 0 chr2 216807538 216807573 -33880281 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 216808851 216808872 -33878982 + AT_rich Low_complexity Low_complexity 1 21 0 1501 201 86 143 chr2 216808895 216809463 -33878391 + MLT1F LTR MaLR 7 542 0 827 249 75 25 chr2 216809513 216809794 -33878060 + MLT1F-int LTR MaLR 307 601 -770 567 71 0 0 chr2 216809965 216810064 -33877790 + AluY SINE Alu 213 311 0 23 54 0 0 chr2 216810102 216810139 -33877715 + AT_rich Low_complexity Low_complexity 1 37 0 261 314 57 43 chr2 216810178 216810318 -33877536 + MLT1F-int LTR MaLR 701 842 -529 237 355 46 60 chr2 216810677 216810781 -33877073 - L2 LINE L2 -607 2707 2603 1602 190 3 29 chr2 216810781 216811092 -33876762 + AluJo SINE Alu 1 303 -9 237 355 46 60 chr2 216811092 216811204 -33876650 - L2 LINE L2 -711 2603 2494 1439 244 125 106 chr2 216811542 216812125 -33875729 + MLT1E LTR MaLR 5 537 -56 1688 164 32 35 chr2 216812368 216812739 -33875115 - L1MA7 LINE L1 0 6291 5922 11641 121 17 5 chr2 216813107 216813137 -33874717 + L1PA8A LINE L1 2300 2328 -3818 2306 102 7 0 chr2 216813137 216813440 -33874414 + AluSg SINE Alu 1 305 -5 11641 121 17 5 chr2 216813440 216815726 -33872128 + L1PA8A LINE L1 2328 4636 -1510 55 16 0 0 chr2 216815735 216815797 -33872057 + AT_rich Low_complexity Low_complexity 1 62 0 2318 94 0 22 chr2 216815834 216816152 -33871702 + AluY SINE Alu 1 311 0 6241 75 18 19 chr2 216816157 216817636 -33870218 + L1PA8A LINE L1 4653 6131 0 1676 166 31 41 chr2 216817637 216817954 -33869900 + L1MB7 LINE L1 5797 6116 -68 2565 94 3 19 chr2 216817954 216818315 -33869539 - THE1A LTR MaLR 0 355 1 12073 84 2 4 chr2 216818315 216819897 -33867957 - THE1A-int LTR MaLR 0 1580 1 2488 99 23 0 chr2 216819897 216820241 -33867613 - THE1A LTR MaLR 0 355 4 1676 166 31 41 chr2 216820241 216820313 -33867541 + L1MB7 LINE L1 6113 6184 0 1280 127 72 99 chr2 216821992 216822173 -33865681 - MER33 DNA MER1_type -2262 323 139 2357 61 0 0 chr2 216822173 216822482 -33865372 + AluY SINE Alu 3 311 0 1280 127 72 99 chr2 216822482 216822500 -33865354 - MER33 DNA MER1_type -2446 139 122 1674 203 14 0 chr2 216822500 216822791 -33865063 - AluJb SINE Alu -12 300 6 1280 127 72 99 chr2 216822791 216822921 -33864933 - MER33 DNA MER1_type -2463 122 1 2199 64 4 4 chr2 216822969 216823236 -33864618 - AluY SINE Alu -1 310 44 1416 203 90 14 chr2 216823819 216824232 -33863622 - HsTC2 DNA Tc2 0 1898 1279 317 256 60 15 chr2 216824234 216824367 -33863487 - HsTC2 DNA Tc2 -1742 156 18 213 290 65 0 chr2 216825547 216825609 -33862245 - MIR SINE MIR 0 262 197 3148 105 123 23 chr2 216825609 216826220 -33861634 - Tigger3b DNA MER2_type 0 1232 561 43 35 0 0 chr2 216826225 216826282 -33861572 + AT_rich Low_complexity Low_complexity 1 57 0 2393 71 3 19 chr2 216826374 216826683 -33861171 - AluSp SINE Alu -9 304 1 3093 145 16 29 chr2 216826744 216827304 -33860550 - Tigger3b DNA MER2_type -677 554 2 512 238 111 39 chr2 216827305 216827486 -33860368 - MIR SINE MIR -67 195 2 378 42 0 0 chr2 216827789 216827837 -33860017 + (TA)n Simple_repeat Simple_repeat 2 49 0 29 47 0 0 chr2 216827856 216827899 -33859955 + AT_rich Low_complexity Low_complexity 1 43 0 373 282 216 22 chr2 216827915 216828096 -33859758 - MIR SINE MIR -7 255 40 710 172 25 51 chr2 216828289 216828446 -33859408 - MIR SINE MIR -23 239 87 189 250 0 0 chr2 216829374 216829410 -33858444 + L2 LINE L2 3270 3305 -8 457 204 122 87 chr2 216829627 216829799 -33858055 + MER5B DNA MER1_type 1 178 0 1938 296 103 5 chr2 216830110 216830891 -33856963 - L2 LINE L2 -201 3112 2259 380 272 0 22 chr2 216831807 216831899 -33855955 + L2 LINE L2 3215 3304 -9 21 0 0 0 chr2 216832014 216832035 -33855819 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr2 216832074 216832102 -33855752 + AT_rich Low_complexity Low_complexity 1 28 0 788 358 142 18 chr2 216832174 216833379 -33854475 - L2 LINE L2 -4 3268 1891 279 313 150 10 chr2 216833436 216833575 -33854279 + MIR SINE MIR 35 188 -62 1071 191 9 57 chr2 216834081 216834311 -33853543 + MER20 DNA MER1_type 1 219 0 25 31 0 0 chr2 216834471 216834503 -33853351 + AT_rich Low_complexity Low_complexity 1 32 0 371 325 107 6 chr2 216834769 216834938 -33852916 - MIR SINE MIR -67 195 10 794 288 96 65 chr2 216835144 216835633 -33852221 - L2 LINE L2 -6 3307 2804 229 345 11 0 chr2 216836171 216836258 -33851596 - MIR SINE MIR -141 121 34 435 239 37 0 chr2 216836265 216836399 -33851455 + Charlie4 DNA MER1_type 1816 1954 -7 2050 133 10 0 chr2 216836403 216836697 -33851157 - AluSx SINE Alu -15 297 1 182 398 0 0 chr2 216836979 216837067 -33850787 - L2 LINE L2 -497 2817 2730 181 226 0 0 chr2 216837810 216837841 -33850013 + MIR SINE MIR 8 38 -224 299 338 0 0 chr2 216837853 216837930 -33849924 - L2 LINE L2 -241 3072 2996 2261 119 3 0 chr2 216838207 216838518 -33849336 - AluSx SINE Alu 0 312 1 285 270 20 30 chr2 216838588 216838688 -33849166 + MIR SINE MIR 121 219 -43 202 139 0 23 chr2 216838933 216838976 -33848878 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 225 211 18 18 chr2 216839495 216839552 -33848302 + GA-rich Low_complexity Low_complexity 1 57 0 21 95 0 0 chr2 216840933 216840996 -33846858 + AT_rich Low_complexity Low_complexity 1 63 0 761 269 199 19 chr2 216841152 216841584 -33846270 + L2 LINE L2 2804 3313 0 209 200 20 0 chr2 216842548 216842598 -33845256 + (CGG)n Simple_repeat Simple_repeat 2 52 0 493 86 12 12 chr2 216843808 216843889 -33843965 + (TCC)n Simple_repeat Simple_repeat 1 81 0 1711 179 17 3 chr2 216843889 216844190 -33843664 - AluJb SINE Alu -7 305 1 359 275 217 14 chr2 216844912 216845073 -33842781 + MIR SINE MIR 6 219 -43 1545 94 0 21 chr2 216845073 216845307 -33842547 + L1PA13 LINE L1 5935 6163 0 359 275 217 14 chr2 216845307 216845352 -33842502 + MIR SINE MIR 219 254 -8 243 360 43 12 chr2 216845490 216845651 -33842203 - L2 LINE L2 -1004 2310 2145 624 159 0 18 chr2 216845729 216845842 -33842012 + MLT1E3 LTR MaLR 1 111 -513 497 195 172 35 chr2 216845861 216846030 -33841824 - L1MC2 LINE L1 0 6344 6153 3007 158 42 7 chr2 216846083 216846678 -33841176 - L1MC2 LINE L1 -168 6176 5561 316 298 106 9 chr2 216847063 216847244 -33840610 - MIR SINE MIR -17 245 2 187 250 46 145 chr2 216848352 216848504 -33839350 + L2 LINE L2 2757 2893 -421 3148 43 10 8 chr2 216848599 216848997 -33838857 - L1PA4 LINE L1 0 6155 5757 509 291 89 31 chr2 216849511 216849893 -33837961 + L1ME LINE L1 4931 5334 -812 339 324 113 38 chr2 216849935 216850228 -33837626 + L1ME LINE L1 5392 5706 -456 265 341 0 0 chr2 216850274 216850400 -33837454 + L1ME LINE L1 5755 5880 -290 30 0 0 0 chr2 216850423 216850453 -33837401 + AT_rich Low_complexity Low_complexity 1 30 0 812 243 29 38 chr2 216851102 216851281 -33836573 + MIR SINE MIR 18 196 -66 1252 243 69 67 chr2 216851281 216851833 -33836021 - MLT1H1 LTR MaLR -2 553 1 812 243 29 38 chr2 216851833 216851863 -33835991 + MIR SINE MIR 196 225 -37 23 33 0 0 chr2 216852766 216852796 -33835058 + AT_rich Low_complexity Low_complexity 1 30 0 514 254 71 41 chr2 216853717 216853886 -33833968 + MER5B DNA MER1_type 2 175 -3 15719 226 19 10 chr2 216854424 216858963 -33828891 - L1PA13 LINE L1 -786 6011 1438 1473 269 55 32 chr2 216859020 216859835 -33828019 - L1PA13 LINE L1 -5358 1429 1 3799 191 21 6 chr2 216860285 216861009 -33826845 - MER21B LTR ERV1 -128 735 1 308 293 99 53 chr2 216861245 216861414 -33826440 + MIR SINE MIR 20 196 -62 1818 174 13 0 chr2 216862009 216862313 -33825541 - AluJb SINE Alu -4 308 1 1100 213 47 0 chr2 216862313 216862571 -33825283 + MER58B DNA MER1_type 71 340 -1 25788 31 16 1 chr2 216862609 216868649 -33819205 + L1PA2 LINE L1 1 6165 0 512 272 100 42 chr2 216868779 216868977 -33818877 + L1ME4a LINE L1 5535 5720 -401 2103 80 0 21 chr2 216868977 216869292 -33818562 + AluY SINE Alu 2 310 0 512 272 100 42 chr2 216869292 216869471 -33818383 + L1ME4a LINE L1 5720 5935 -186 1713 176 0 24 chr2 216869594 216869913 -33817941 + AluJo SINE Alu 1 312 0 3255 83 11 0 chr2 216869965 216870412 -33817442 - L1PA10 LINE L1 -5 6163 5712 225 0 0 0 chr2 216870436 216870461 -33817393 + (TG)n Simple_repeat Simple_repeat 2 26 0 351 327 0 10 chr2 216870463 216870567 -33817287 - MIR SINE MIR -107 155 53 22 0 0 0 chr2 216870624 216870646 -33817208 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr2 216870740 216870783 -33817071 + AT_rich Low_complexity Low_complexity 1 43 0 1156 34 61 0 chr2 216870783 216870930 -33816924 - L1PA5 LINE L1 -9 6145 5990 464 284 47 7 chr2 216870977 216871125 -33816729 + MIR SINE MIR 65 218 -44 384 370 137 19 chr2 216874471 216874995 -33812859 + L2 LINE L2 2372 2957 -357 305 171 293 0 chr2 216877226 216877308 -33810546 + MIR SINE MIR 42 147 -115 299 220 358 0 chr2 216879766 216879875 -33807979 - MER5A DNA MER1_type -1 188 41 1115 221 46 4 chr2 216880215 216880478 -33807376 + MLT1K LTR MaLR 315 588 0 25 0 0 0 chr2 216880637 216880662 -33807192 + AT_rich Low_complexity Low_complexity 1 25 0 297 0 0 0 chr2 216881324 216881357 -33806497 + (TG)n Simple_repeat Simple_repeat 1 33 0 21 36 0 0 chr2 216883629 216883657 -33804197 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 216883825 216883853 -33804001 + AT_rich Low_complexity Low_complexity 1 28 0 1087 178 5 30 chr2 216886673 216886875 -33800979 - AluJo SINE Alu -18 294 98 1594 181 7 24 chr2 216888044 216888337 -33799517 - AluJo SINE Alu -20 292 5 299 292 97 9 chr2 216888506 216888619 -33799235 - MER103 DNA DNA -3 163 41 225 0 0 0 chr2 216890209 216890234 -33797620 + (TC)n Simple_repeat Simple_repeat 2 26 0 543 214 0 0 chr2 216892797 216892886 -33794968 + 5S rRNA rRNA 2 90 -31 2534 49 0 3 chr2 216894156 216894461 -33793393 - AluY SINE Alu -7 304 1 189 302 174 0 chr2 216897016 216897102 -33790752 + L2 LINE L2 3172 3272 0 1270 166 207 30 chr2 216897353 216897715 -33790139 + MSTA LTR MaLR 3 428 0 209 319 147 26 chr2 216898057 216898173 -33789681 - MIR3 SINE MIR -65 143 14 1491 101 41 5 chr2 216898173 216898392 -33789462 + MER30 DNA MER1_type 4 230 0 297 278 168 46 chr2 216898507 216898680 -33789174 - L2 LINE L2 0 3313 3120 406 349 76 16 chr2 216898681 216898930 -33788924 - L2 LINE L2 -624 2690 2427 1442 268 39 30 chr2 216899013 216899449 -33788405 + L2 LINE L2 2871 3310 -3 21 36 0 0 chr2 216899617 216899645 -33788209 + AT_rich Low_complexity Low_complexity 1 28 0 193 222 0 22 chr2 216900053 216900098 -33787756 + MIR3 SINE MIR 116 159 -49 2110 85 0 41 chr2 216900594 216900911 -33786943 - AluSq SINE Alu 0 305 1 21 36 0 0 chr2 216903078 216903106 -33784748 + AT_rich Low_complexity Low_complexity 1 28 0 415 301 237 3 chr2 216906170 216906486 -33781368 - L3 LINE CR1 -20 1557 1168 267 270 104 31 chr2 216908276 216908439 -33779415 + MIR SINE MIR 85 259 -3 25 31 0 0 chr2 216908994 216909026 -33778828 + AT_rich Low_complexity Low_complexity 1 32 0 237 325 149 16 chr2 216909614 216909802 -33778052 - MIR SINE MIR 0 262 50 231 229 25 41 chr2 216909822 216909944 -33777910 + (TTATA)n Simple_repeat Simple_repeat 1 120 0 1287 164 27 11 chr2 216910592 216910854 -33777000 + L1PA16 LINE L1 5894 6159 -7 254 175 0 0 chr2 216912246 216912311 -33775543 + L1MA2 LINE L1 6238 6302 -1 274 332 122 55 chr2 216912738 216912976 -33774878 - MIR SINE MIR 0 262 9 22 0 0 0 chr2 216913435 216913457 -33774397 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr2 216913518 216913546 -33774308 + AT_rich Low_complexity Low_complexity 1 28 0 600 242 178 25 chr2 216913633 216913988 -33773866 + L1ME4a LINE L1 5544 5952 -169 2110 91 27 30 chr2 216916670 216916967 -33770887 + AluSg SINE Alu 1 296 -14 22 0 0 0 chr2 216918439 216918461 -33769393 + AT_rich Low_complexity Low_complexity 1 22 0 207 139 0 0 chr2 216922444 216922480 -33765374 + (T)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr2 216923680 216923701 -33764153 + AT_rich Low_complexity Low_complexity 1 21 0 22 80 0 0 chr2 216925590 216925640 -33762214 + AT_rich Low_complexity Low_complexity 1 50 0 198 103 0 0 chr2 216926589 216926618 -33761236 + (TC)n Simple_repeat Simple_repeat 2 30 0 30 0 0 0 chr2 216929482 216929512 -33758342 + AT_rich Low_complexity Low_complexity 1 30 0 280 284 23 11 chr2 216929738 216929826 -33758028 + MIR SINE MIR 139 227 -35 24 0 0 0 chr2 216929926 216929950 -33757904 + AT_rich Low_complexity Low_complexity 1 24 0 27 81 0 0 chr2 216930835 216930897 -33756957 + AT_rich Low_complexity Low_complexity 1 62 0 528 168 21 0 chr2 216982946 216983041 -33704813 - MER68 LTR ERV1 -465 97 1 311 297 0 0 chr2 216983061 216983125 -33704729 - L2 LINE L2 -8 3264 3201 1526 236 88 25 chr2 216983243 216983718 -33704136 - MLT1D LTR MaLR 0 505 1 1728 121 0 8 chr2 216983748 216983988 -33703866 + AluSx SINE Alu 3 240 -72 1905 96 22 18 chr2 216984982 216985254 -33702600 - AluSg SINE Alu -6 304 32 1381 193 58 25 chr2 216985259 216985652 -33702202 - Charlie1 DNA MER1_type -11 2750 2345 477 217 202 0 chr2 216985712 216985841 -33702013 - MER5A DNA MER1_type -14 175 21 461 159 0 0 chr2 216986252 216986321 -33701533 - AluJ/FLAM SINE Alu -243 69 1 25 0 0 0 chr2 216987052 216987077 -33700777 + AT_rich Low_complexity Low_complexity 1 25 0 424 305 28 0 chr2 216987365 216987506 -33700348 - MIR SINE MIR 0 262 118 490 61 25 245 chr2 216987516 216987671 -33700183 - LTR14B LTR ERVK -242 102 1 327 280 102 25 chr2 216987676 216987794 -33700060 - L1MC4 LINE L1 -585 7457 7331 998 66 0 0 chr2 216988073 216988194 -33699660 + AluY SINE Alu 1 121 -190 237 35 0 0 chr2 216988228 216988257 -33699597 + LTR14A LTR ERVK 179 207 -137 1048 247 14 140 chr2 216988877 216989171 -33698683 + L2 LINE L2 2804 2989 -324 825 139 8 0 chr2 216989171 216989300 -33698554 - FLAM_C SINE Alu -3 130 1 1048 247 14 140 chr2 216989300 216989589 -33698265 + L2 LINE L2 2989 3313 0 2043 154 3 3 chr2 216989646 216989957 -33697897 + AluSx SINE Alu 1 311 -1 423 208 15 31 chr2 216990116 216990246 -33697608 + Charlie2 DNA MER1_type 2735 2862 0 316 97 306 0 chr2 216991517 216991579 -33696275 - MER47A DNA MER2_type 0 366 286 1328 170 3 39 chr2 216991716 216991998 -33695856 - MER47A DNA MER2_type -79 287 16 1021 153 0 0 chr2 216992179 216992359 -33695495 - FRAM SINE Alu 0 179 1 1763 164 32 29 chr2 216992844 216993155 -33694699 + AluJo SINE Alu 1 312 0 27 49 0 0 chr2 216993271 216993312 -33694542 + AT_rich Low_complexity Low_complexity 1 41 0 216 0 0 0 chr2 216993528 216993552 -33694302 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 646 296 69 40 chr2 216993789 216994298 -33693556 + L1ME4a LINE L1 5264 5786 -335 2329 68 0 42 chr2 216994562 216994873 -33692981 + AluY SINE Alu 1 298 -13 260 252 271 9 chr2 216994990 216995097 -33692757 + L2 LINE L2 3179 3313 0 278 307 34 0 chr2 216995429 216995517 -33692337 + L2 LINE L2 3219 3309 -4 294 50 0 0 chr2 216996848 216996888 -33690966 + (CGG)n Simple_repeat Simple_repeat 3 42 0 344 250 143 14 chr2 216998783 216998999 -33688855 - L1ME4a LINE L1 -268 5853 5610 353 127 0 0 chr2 216999347 216999402 -33688452 - MSTA LTR MaLR -373 55 1 402 260 142 20 chr2 216999599 216999803 -33688051 + L1ME4a LINE L1 5893 6121 0 1735 196 0 0 chr2 216999859 217000150 -33687704 - AluJo SINE Alu -21 291 1 22 56 0 0 chr2 217000326 217000362 -33687492 + AT_rich Low_complexity Low_complexity 1 36 0 1268 158 9 44 chr2 217001012 217001240 -33686614 + AluJo SINE Alu 1 220 -92 183 256 163 0 chr2 217001471 217001514 -33686340 + L2 LINE L2 3253 3302 -11 21 57 0 0 chr2 217001669 217001704 -33686150 + AT_rich Low_complexity Low_complexity 1 35 0 404 279 248 9 chr2 217001937 217002256 -33685598 + L1ME4a LINE L1 5718 6112 -9 362 328 90 53 chr2 217003211 217003760 -33684094 - L2 LINE L2 -198 3074 2487 578 121 44 0 chr2 217003935 217004026 -33683828 + AluJo SINE Alu 206 300 -12 233 245 32 11 chr2 217004034 217004128 -33683726 - L2 LINE L2 -1067 2247 2152 1865 144 39 16 chr2 217004354 217004659 -33683195 - AluJo SINE Alu 0 312 1 21 36 0 0 chr2 217005375 217005403 -33682451 + AT_rich Low_complexity Low_complexity 1 28 0 713 206 8 0 chr2 217005783 217005909 -33681945 - FLAM_A SINE Alu -6 127 1 671 238 99 86 chr2 217006064 217006566 -33681288 - L1MC4a LINE L1 -1879 5929 5414 2047 121 0 14 chr2 217006566 217006855 -33680999 - AluSx SINE Alu -27 285 1 671 238 99 86 chr2 217006855 217007019 -33680835 - L1MC4a LINE L1 -2394 5414 5254 317 349 89 26 chr2 217007039 217007343 -33680511 - L1MC4a LINE L1 -921 5225 4903 256 186 14 14 chr2 217007466 217007536 -33680318 + CT-rich Low_complexity Low_complexity 4 73 0 33 56 0 0 chr2 217007586 217007640 -33680214 + AT_rich Low_complexity Low_complexity 1 54 0 247 313 123 34 chr2 217007744 217007923 -33679931 + MIR3 SINE MIR 14 208 0 633 289 111 4 chr2 217009044 217009279 -33678575 + MIR SINE MIR 3 262 0 22 0 0 0 chr2 217009727 217009749 -33678105 + AT_rich Low_complexity Low_complexity 1 22 0 1639 175 0 45 chr2 217009833 217010147 -33677707 + AluJb SINE Alu 1 300 -12 1057 175 17 6 chr2 217010159 217010336 -33677518 + AluJb SINE Alu 134 312 0 1569 167 30 0 chr2 217010632 217010932 -33676922 - L1MA5 LINE L1 -2 6298 5990 951 154 93 0 chr2 217010989 217011101 -33676753 + AluJo SINE Alu 5 138 -174 180 77 0 0 chr2 217011101 217011127 -33676727 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 951 154 93 0 chr2 217011127 217011176 -33676678 + AluJo SINE Alu 138 181 -131 3802 165 44 9 chr2 217011199 217011473 -33676381 - L1MA5 LINE L1 -224 6076 5813 225 0 0 0 chr2 217011473 217011498 -33676356 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 246 62 0 0 chr2 217011497 217011529 -33676325 + (TA)n Simple_repeat Simple_repeat 1 32 0 3802 165 44 9 chr2 217011498 217012070 -33675784 - L1MA5 LINE L1 -487 5813 5226 1602 121 4 0 chr2 217012538 217012770 -33675084 - AluSp SINE Alu -80 233 1 718 273 108 66 chr2 217012794 217013556 -33674298 - LTR1B LTR ERV1 0 826 33 365 108 0 46 chr2 217013560 217013625 -33674229 - MLT1A2 LTR MaLR -312 62 1 281 245 61 110 chr2 217013732 217013829 -33674025 - L2 LINE L2 -1 3312 3225 1463 110 5 23 chr2 217013829 217014047 -33673807 - AluSq SINE Alu -23 290 77 281 245 61 110 chr2 217014047 217014112 -33673742 - L2 LINE L2 -88 3225 3158 313 252 196 0 chr2 217014312 217014419 -33673435 + MIR SINE MIR 83 210 -52 186 43 0 0 chr2 217015325 217015348 -33672506 + (GA)n Simple_repeat Simple_repeat 2 24 0 266 232 0 17 chr2 217016490 217016556 -33671298 - MIR SINE MIR -80 128 64 595 209 104 57 chr2 217017596 217017826 -33670028 + MLT1C LTR MaLR 3 243 -224 2093 129 21 62 chr2 217017839 217018225 -33669629 + LTR57 LTR ERVL 1 370 -41 2074 111 52 41 chr2 217018226 217018595 -33669259 - THE1C LTR MaLR 0 375 3 594 187 161 19 chr2 217018643 217018798 -33669056 + MLT1C LTR MaLR 267 443 -24 574 230 0 37 chr2 217018826 217018961 -33668893 + MLT1C LTR MaLR 338 467 0 368 297 169 0 chr2 217019114 217019262 -33668592 + MLT1H LTR MaLR 1 173 -376 330 262 22 109 chr2 217019726 217019909 -33667945 - MLT1J1 LTR MaLR -266 180 14 210 228 131 46 chr2 217020819 217020928 -33666926 - MER5B DNA MER1_type -9 177 70 629 178 0 0 chr2 217020968 217021075 -33666779 - MLT1D LTR MaLR 0 505 399 2450 133 57 5 chr2 217021075 217021497 -33666357 - MER4B-int LTR ERV1 -957 5801 5358 587 195 122 0 chr2 217021497 217021620 -33666234 - MLT1D LTR MaLR -95 410 273 1254 184 42 86 chr2 217021623 217021959 -33665895 + MLT1B LTR MaLR 70 390 0 2885 302 53 29 chr2 217021960 217023051 -33664803 - HERV16 LTR ERVL -2794 2202 934 1799 160 25 0 chr2 217023051 217023333 -33664521 - AluSx SINE Alu -23 289 1 2885 302 53 29 chr2 217023333 217023909 -33663945 - HERV16 LTR ERVL -4062 934 373 1034 71 11 33 chr2 217024039 217024068 -33663786 + (TTTC)n Simple_repeat Simple_repeat 1 208 0 1034 71 11 33 chr2 217024068 217024252 -33663602 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2222 108 10 0 chr2 217024296 217024601 -33663253 - AluSg SINE Alu -2 308 1 1628 213 100 15 chr2 217024602 217025002 -33662852 + MLT1C LTR MaLR 34 467 0 471 335 50 15 chr2 217025011 217025271 -33662583 - HERV16 LTR ERVL -4714 282 14 1096 247 53 0 chr2 217025290 217025553 -33662301 - LTR16A LTR ERVL -6 444 168 22 0 0 0 chr2 217026350 217026372 -33661482 + AT_rich Low_complexity Low_complexity 1 22 0 2353 104 3 0 chr2 217026381 217026690 -33661164 + AluSq SINE Alu 1 310 -3 5916 197 34 23 chr2 217026757 217029125 -33658729 - L1MC1 LINE L1 -1 6332 3932 337 169 48 36 chr2 217031091 217031174 -33656680 - AluJ/FRAM SINE Alu -3 299 216 1668 163 55 15 chr2 217032013 217032339 -33655515 - MER44D DNA MER2_type 0 609 1 22 0 0 0 chr2 217032484 217032506 -33655348 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr2 217032619 217032660 -33655194 + AT_rich Low_complexity Low_complexity 1 41 0 207 88 0 0 chr2 217032919 217032953 -33654901 + (T)n Simple_repeat Simple_repeat 1 34 0 1936 108 0 4 chr2 217033015 217033274 -33654580 + AluSg SINE Alu 51 308 -2 463 203 120 31 chr2 217033908 217034100 -33653754 + Charlie5 DNA MER1_type 2411 2619 0 346 333 94 0 chr2 217034216 217034333 -33653521 - L2 LINE L2 -4 3268 3141 22 56 0 0 chr2 217034398 217034434 -33653420 + AT_rich Low_complexity Low_complexity 1 36 0 4186 153 45 14 chr2 217034453 217035233 -33652621 - L1MCa LINE L1 -5039 1387 584 396 230 157 70 chr2 217035293 217035580 -33652274 + L2 LINE L2 1939 2250 -1064 3923 164 120 63 chr2 217035699 217036688 -33651166 - MER11C LTR ERVK -25 1046 1 629 298 57 15 chr2 217036919 217037181 -33650673 - Charlie8 DNA MER1_type -2142 275 3 186 167 0 0 chr2 217037505 217037541 -33650313 + (TA)n Simple_repeat Simple_repeat 2 37 0 617 268 91 63 chr2 217038241 217038285 -33649569 + MIR SINE MIR 1 42 -220 1814 123 6 69 chr2 217038285 217038468 -33649386 - AluSq SINE Alu -15 298 142 1825 146 13 0 chr2 217038468 217038770 -33649084 - AluY SINE Alu -5 306 1 1814 123 6 69 chr2 217038770 217038903 -33648951 - AluSq SINE Alu -171 142 2 617 268 91 63 chr2 217038903 217039112 -33648742 + MIR SINE MIR 42 261 -1 441 261 49 35 chr2 217039923 217040065 -33647789 + MER5B DNA MER1_type 1 144 -34 1859 137 0 46 chr2 217040068 217040374 -33647480 + AluSx SINE Alu 1 292 -20 358 367 8 0 chr2 217041388 217041516 -33646338 - L2 LINE L2 0 3313 3185 207 200 86 86 chr2 217041660 217041730 -33646124 + MER5B DNA MER1_type 76 145 -33 318 352 126 5 chr2 217041845 217042044 -33645810 + L2 LINE L2 2717 2939 -375 459 101 13 63 chr2 217042273 217042352 -33645502 + LTR32 LTR ERVL 15 89 -382 1211 157 16 52 chr2 217042371 217042620 -33645234 + LTR32 LTR ERVL 232 471 0 289 200 0 0 chr2 217042948 217042998 -33644856 + L1MC4 LINE L1 7833 7882 -160 2237 134 66 5 chr2 217043017 217043397 -33644457 - LTR42 LTR ERVL -92 403 1 339 201 62 0 chr2 217043466 217043557 -33644297 + L1MC4 LINE L1 7908 7995 0 3776 268 163 12 chr2 217043777 217045391 -33642463 - L2 LINE L2 -9 3304 1434 4731 35 0 0 chr2 217045493 217046057 -33641797 + L1PA4 LINE L1 5592 6155 0 281 148 49 33 chr2 217046222 217046283 -33641571 + L1MD2 LINE L1 5830 5891 -468 1451 226 76 18 chr2 217046393 217046774 -33641080 + L1MD2 LINE L1 5924 6326 -33 23 0 0 0 chr2 217047798 217047821 -33640033 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr2 217047937 217047969 -33639885 + AT_rich Low_complexity Low_complexity 1 32 0 2380 81 3 0 chr2 217048290 217048587 -33639267 - AluY SINE Alu -13 298 1 246 320 52 41 chr2 217049064 217049161 -33638693 - MER91A DNA MER1_type -5 191 94 300 336 115 0 chr2 217049170 217049283 -33638571 - MER91A DNA MER1_type -26 170 45 2305 101 0 0 chr2 217050290 217050586 -33637268 - AluSx SINE Alu -16 296 1 1626 175 31 7 chr2 217050906 217051197 -33636657 + AluJo SINE Alu 9 306 -6 620 331 0 6 chr2 217052241 217052422 -33635432 + LTR33 LTR ERVL 14 193 -328 30 83 0 0 chr2 217052552 217052624 -33635230 + AT_rich Low_complexity Low_complexity 1 72 0 581 298 19 53 chr2 217052667 217052875 -33634979 + MIR SINE MIR 14 214 -48 2093 120 0 7 chr2 217052918 217053225 -33634629 - AluSg SINE Alu 0 305 1 675 215 23 0 chr2 217053253 217053383 -33634471 + AluJo SINE Alu 1 133 -169 687 128 9 0 chr2 217053446 217053555 -33634299 + HY1 scRNA scRNA 1 110 -2 2113 184 59 0 chr2 217053876 217054267 -33633587 + MLT2C2 LTR ERVL 1 414 -50 282 129 0 0 chr2 217054362 217054411 -33633443 + MLT2C1 LTR ERVL 357 397 0 233 283 60 54 chr2 217055336 217055502 -33632352 + L2 LINE L2 3080 3246 -67 615 122 0 0 chr2 217055896 217055986 -33631868 - L1PA8 LINE L1 -20 6152 6063 1954 154 30 33 chr2 217057035 217057357 -33630497 - THE1C LTR MaLR 0 375 53 2363 79 0 10 chr2 217057357 217057660 -33630194 - AluSc SINE Alu -9 300 1 1954 154 30 33 chr2 217057660 217057700 -33630154 - THE1C LTR MaLR -322 53 14 249 403 90 0 chr2 217058069 217058203 -33629651 + L2 LINE L2 3116 3261 -11 638 251 66 66 chr2 217058693 217058920 -33628934 - MIR SINE MIR -35 227 1 2340 103 3 0 chr2 217060674 217060985 -33626869 + AluSx SINE Alu 1 312 0 313 310 86 59 chr2 217061097 217061284 -33626570 + MIR SINE MIR 1 192 -70 800 217 0 0 chr2 217062163 217062306 -33625548 + AluJo SINE Alu 140 282 -30 25 31 0 0 chr2 217062306 217062338 -33625516 + AT_rich Low_complexity Low_complexity 1 32 0 817 297 71 90 chr2 217062724 217063609 -33624245 - L2 LINE L2 -1055 2259 1392 2160 108 0 14 chr2 217063609 217063923 -33623931 + AluSx SINE Alu 1 310 0 817 297 71 90 chr2 217063923 217064026 -33623828 - L2 LINE L2 -1922 1392 1289 229 319 14 28 chr2 217064068 217064140 -33623714 - L2 LINE L2 -2141 1173 1103 21 0 0 0 chr2 217064582 217064603 -33623251 + AT_rich Low_complexity Low_complexity 1 21 0 198 71 0 0 chr2 217064624 217064652 -33623202 + MIR SINE MIR 159 186 -76 2469 148 20 8 chr2 217064662 217065053 -33622801 - MER61B LTR ERV1 -29 396 1 320 224 40 0 chr2 217065053 217065129 -33622725 + MIR SINE MIR 183 261 -1 1824 177 0 0 chr2 217065957 217066239 -33621615 + AluJb SINE Alu 1 282 -30 28 71 0 0 chr2 217066499 217066555 -33621299 + AT_rich Low_complexity Low_complexity 1 56 0 22 56 0 0 chr2 217066742 217066778 -33621076 + AT_rich Low_complexity Low_complexity 1 36 0 560 243 89 18 chr2 217067172 217067341 -33620513 - MIR SINE MIR 0 262 82 183 250 0 42 chr2 217067734 217067782 -33620072 + L3b LINE CR1 1528 1573 -10 2518 120 3 14 chr2 217069668 217070036 -33617818 - THE1B LTR MaLR 0 364 1 232 388 62 17 chr2 217071147 217071325 -33616529 + MIR3 SINE MIR 2 187 -21 23 0 0 0 chr2 217072089 217072112 -33615742 + AT_rich Low_complexity Low_complexity 1 23 0 655 250 0 26 chr2 217072168 217072320 -33615534 + FRAM SINE Alu 4 151 -15 1950 146 6 16 chr2 217073384 217073699 -33614155 - AluSx SINE Alu 0 312 1 825 444 163 0 chr2 217074691 217074965 -33612889 + AluSg SINE Alu 1 315 0 194 284 23 131 chr2 217075942 217076118 -33611736 + MIR SINE MIR 36 192 -70 219 259 0 0 chr2 217077759 217077817 -33610037 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 2188 116 10 0 chr2 217078097 217078399 -33609455 - AluSg SINE Alu -5 305 1 30602 112 14 56 chr2 217078402 217080840 -33607014 - L1PA7 LINE L1 -11 6143 3604 405 0 0 0 chr2 217080840 217080885 -33606969 + (TG)n Simple_repeat Simple_repeat 2 46 0 30602 112 14 56 chr2 217080885 217084794 -33603060 - L1PA7 LINE L1 -2550 3604 73 186 353 59 10 chr2 217085089 217085191 -33602663 + MIR SINE MIR 7 113 -149 294 226 182 71 chr2 217086475 217086899 -33600955 - L1MC5 LINE L1 -48 7913 7443 1608 224 225 9 chr2 217086934 217087656 -33600198 - L1ME1 LINE L1 -27 6139 5257 1821 237 123 12 chr2 217087656 217088162 -33599692 - REP3 LTR ERV 0 562 1 1189 233 44 8 chr2 217088162 217088522 -33599332 - L1ME1 LINE L1 -885 5261 4889 2902 50 25 20 chr2 217088522 217088922 -33598932 + L1PA13 LINE L1 5760 6161 -2 862 103 26 5 chr2 217088964 217089159 -33598695 + L1 LINE L1 4156 4410 -1736 684 209 55 89 chr2 217089185 217089420 -33598434 + MLT1J LTR MaLR 173 399 -112 397 189 85 85 chr2 217089454 217089607 -33598247 - MER104 DNA Tc2 -26 154 2 1553 184 50 89 chr2 217089746 217090121 -33597733 - L1ME1 LINE L1 -40 6126 5771 2224 110 3 0 chr2 217090121 217090420 -33597434 - AluSq SINE Alu -13 300 1 1553 184 50 89 chr2 217090420 217090506 -33597348 - L1ME1 LINE L1 -395 5771 5683 429 122 0 0 chr2 217090812 217090886 -33596968 + (GGGTG)n Simple_repeat Simple_repeat 5 78 0 906 52 0 0 chr2 217090895 217091011 -33596843 + (AATAG)n Simple_repeat Simple_repeat 1 116 0 292 278 133 39 chr2 217091040 217091220 -33596634 + MIR SINE MIR 20 216 -46 * 701 252 9 58 chr2 217091189 217091415 -33596439 - L2 LINE L2 0 3313 3099 262 354 97 0 chr2 217091415 217091528 -33596326 + L2 LINE L2 3144 3267 -5 8995 85 28 2 chr2 217092065 217093662 -33594192 - L1P3 LINE L1 -520 5652 4019 646 291 133 66 chr2 217093992 217094238 -33593616 - L2 LINE L2 -233 3039 2811 1924 140 7 23 chr2 217094238 217094538 -33593316 + AluSc SINE Alu 1 295 -14 646 291 133 66 chr2 217094538 217095344 -33592510 - L2 LINE L2 -461 2811 1935 12508 190 52 82 chr2 217095591 217096222 -33591632 - L1MA5 LINE L1 -2 7319 6671 2667 107 0 3 chr2 217096222 217096587 -33591267 - THE1B LTR MaLR 0 364 1 12508 190 52 82 chr2 217096587 217097045 -33590809 - L1MA5 LINE L1 -650 6671 6201 1928 145 0 3 chr2 217097045 217097335 -33590519 - AluSg SINE Alu -15 295 7 12508 190 52 82 chr2 217097335 217098180 -33589674 - L1MA5 LINE L1 -1120 6201 5333 2235 79 41 0 chr2 217098180 217098472 -33589382 - AluY SINE Alu -7 304 1 12508 190 52 82 chr2 217098472 217099887 -33587967 - L1MA5 LINE L1 -1988 5333 4074 1450 214 10 13 chr2 217099887 217100186 -33587668 - AluJo SINE Alu -14 298 1 12508 190 52 82 chr2 217100186 217101608 -33586246 - L1MA5 LINE L1 -3247 4074 2612 9892 178 38 50 chr2 217101609 217103565 -33584289 - L1MA5 LINE L1 -5224 1944 13 61 64 0 0 chr2 217103569 217103679 -33584175 + AT_rich Low_complexity Low_complexity 1 110 0 254 229 215 49 chr2 217103680 217103824 -33584030 - MIR SINE MIR -66 196 29 674 268 107 0 chr2 217104416 217104621 -33583233 - MER115 DNA AcHobo -1 692 466 788 333 47 25 chr2 217104703 217105024 -33582830 - MER115 DNA AcHobo -365 328 1 854 210 40 30 chr2 217106282 217106482 -33581372 - MER3 DNA MER1_type -7 202 1 25 31 0 0 chr2 217106736 217106768 -33581086 + AT_rich Low_complexity Low_complexity 1 32 0 409 33 0 33 chr2 217107615 217107676 -33580178 + (CA)n Simple_repeat Simple_repeat 1 59 0 856 210 35 15 chr2 217108615 217108815 -33579039 - L1MD2 LINE L1 -26 6333 6130 790 250 5 5 chr2 217109686 217109874 -33577980 + MER58A DNA MER1_type 37 224 0 779 170 88 16 chr2 217109882 217110076 -33577778 + MER3 DNA MER1_type 1 208 -1 25 65 0 0 chr2 217110796 217110842 -33577012 + AT_rich Low_complexity Low_complexity 1 46 0 265 271 68 42 chr2 217111173 217111291 -33576563 + MIR3 SINE MIR 65 185 -23 25 0 0 0 chr2 217113431 217113456 -33574398 + AT_rich Low_complexity Low_complexity 1 25 0 223 178 0 0 chr2 217114671 217114716 -33573138 + (CTGGGG)n Simple_repeat Simple_repeat 6 50 0 249 254 0 22 chr2 217116037 217116171 -33571683 + (TA)n Simple_repeat Simple_repeat 1 131 0 26 30 0 0 chr2 217116841 217116874 -33570980 + AT_rich Low_complexity Low_complexity 1 33 0 424 248 46 18 chr2 217117113 217117222 -33570632 - L1MC3 LINE L1 -443 7342 7231 * 1882 185 8 63 chr2 217117212 217117449 -33570405 + L1MC3 LINE L1 7336 7536 -249 2245 84 10 7 chr2 217117449 217117757 -33570097 + AluSc SINE Alu 1 309 0 1882 185 8 63 chr2 217117757 217117995 -33569859 + L1MC3 LINE L1 7536 7785 0 365 302 166 18 chr2 217118756 217119048 -33568806 - L2 LINE L2 0 3272 2931 21 36 0 0 chr2 217119921 217119949 -33567905 + AT_rich Low_complexity Low_complexity 1 28 0 286 208 125 28 chr2 217120740 217120812 -33567042 - MIR SINE MIR -71 191 113 1052 141 5 52 chr2 217120843 217121035 -33566819 + FRAM SINE Alu 1 175 -1 2127 126 3 17 chr2 217121197 217121498 -33566356 + AluSg SINE Alu 1 297 -13 381 359 109 11 chr2 217121694 217122148 -33565706 + L2 LINE L2 2756 3265 -48 186 103 0 0 chr2 217122171 217122200 -33565654 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 300 351 87 0 chr2 217122273 217122458 -33565396 + L3b LINE CR1 1103 1303 -280 673 241 46 36 chr2 217123333 217123424 -33564430 + L1ME3A LINE L1 5599 5688 -482 2258 110 0 3 chr2 217123424 217123716 -33564138 + AluSq SINE Alu 1 291 -22 673 241 46 36 chr2 217123716 217124144 -33563710 + L1ME3A LINE L1 5688 6165 -5 384 297 182 23 chr2 217125784 217126131 -33561723 + L2 LINE L2 2839 3240 -73 10443 171 26 26 chr2 217126194 217127120 -33560734 - L1M1 LINE L1 -578 5725 4801 1931 156 3 7 chr2 217127120 217127421 -33560433 - AluSx SINE Alu -12 300 1 10443 171 26 26 chr2 217127421 217129386 -33558468 - L1M1 LINE L1 -1502 4801 2821 2772 164 50 5 chr2 217129393 217129953 -33557901 - L1PA16 LINE L1 -20 6146 5562 7027 227 25 17 chr2 217129961 217130441 -33557413 - L1 LINE L1 -1810 5039 4564 2711 118 39 5 chr2 217130441 217130883 -33556971 - L1PA16 LINE L1 0 6166 5710 7027 227 25 17 chr2 217130883 217132398 -33555456 - L1 LINE L1 -2285 4564 3028 3592 102 17 10 chr2 217132376 217132965 -33554889 - L1PA7 LINE L1 -2243 4606 4014 * 9749 97 11 1 chr2 217132965 217135182 -33552672 + L1PA7 LINE L1 3893 6151 -3 6346 236 148 28 chr2 217135191 217135862 -33551992 - L1PA15-16 LINE L1 -3828 3021 2432 2554 99 11 3 chr2 217135862 217136214 -33551640 + THE1A LTR MaLR 1 355 0 6346 236 148 28 chr2 217136214 217136988 -33550866 - L1PA15-16 LINE L1 -4417 2432 1753 690 13 0 0 chr2 217136988 217137067 -33550787 + (TA)n Simple_repeat Simple_repeat 2 80 0 6346 236 148 28 chr2 217137067 217138304 -33549550 - L1PA15-16 LINE L1 -5096 1753 2 2300 191 40 15 chr2 217138315 217139239 -33548615 - L1 LINE L1 -3314 3534 2588 4851 148 21 13 chr2 217139250 217139607 -33548247 - L1PA16 LINE L1 -1 6165 5812 2316 102 50 19 chr2 217139607 217139971 -33547883 - THE1C LTR MaLR 0 375 1 4851 148 21 13 chr2 217139971 217140516 -33547338 - L1PA16 LINE L1 -354 5812 5256 3858 214 33 36 chr2 217140511 217141391 -33546463 - L1 LINE L1 -1602 5246 4369 * 405 0 0 0 chr2 217141391 217141436 -33546418 + (TG)n Simple_repeat Simple_repeat 2 46 0 3858 214 33 36 chr2 217141436 217141678 -33546176 - L1 LINE L1 -2479 4369 4128 5828 113 12 4 chr2 217141684 217142696 -33545158 - L1PB1 LINE L1 -3 6148 5143 1626 186 40 14 chr2 217144656 217144952 -33542902 - AluJo SINE Alu -8 304 1 23 33 0 0 chr2 217145770 217145800 -33542054 + AT_rich Low_complexity Low_complexity 1 30 0 2219 108 3 7 chr2 217145896 217146201 -33541653 + AluSp SINE Alu 1 304 -9 2176 134 0 0 chr2 217146217 217146515 -33541339 + AluSx SINE Alu 2 299 -13 301 24 24 0 chr2 217147809 217147851 -33540003 + MADE1 DNA Mariner 1 43 -37 378 0 0 0 chr2 217148381 217148423 -33539431 + (TA)n Simple_repeat Simple_repeat 2 43 0 417 321 158 5 chr2 217150885 217151100 -33536754 + MIR SINE MIR 15 262 0 4955 220 14 13 chr2 217151665 217153021 -33534833 - L1 LINE L1 -1641 4505 3149 296 219 136 0 chr2 217153275 217153444 -33534410 - L1PBa LINE L1 -6537 326 135 2299 274 22 9 chr2 217153510 217154382 -33533472 - L1 LINE L1 -2702 4146 3264 186 43 0 0 chr2 217154385 217154408 -33533446 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 6669 213 21 45 chr2 217154473 217154522 -33533332 - L1PA15-16 LINE L1 -4846 2003 1954 2396 104 0 0 chr2 217154522 217154831 -33533023 - AluSc SINE Alu 0 309 1 6669 213 21 45 chr2 217154831 217157093 -33530761 - L1PA15-16 LINE L1 -4895 1954 1 650 136 0 9 chr2 217157099 217157209 -33530645 - L1 LINE L1 -4248 2601 2493 544 103 31 21 chr2 217157209 217157306 -33530548 + MER4A LTR ERV1 1 98 -566 404 126 42 13 chr2 217157306 217157425 -33530429 + MER4A LTR ERV1 261 441 -223 2560 127 35 111 chr2 217157433 217158054 -33529800 - LTR10A LTR ERV1 -21 612 1 8282 235 16 18 chr2 217158055 217160112 -33527742 - LTR10A-int LTR ERV1 -3 6646 4592 12478 140 55 11 chr2 217160357 217161288 -33526566 - Tigger2 DNA MER2_type -52 2666 1777 1430 209 117 15 chr2 217161288 217161690 -33526164 - LTR47B LTR ERVL 0 443 1 12478 140 55 11 chr2 217161690 217163040 -33524814 - Tigger2 DNA MER2_type -941 1777 285 2311 90 0 13 chr2 217163048 217163359 -33524495 - AluYb8 SINE Alu -11 307 1 3125 133 20 2 chr2 217163378 217163866 -33523988 - LOR1a LTR ERV1 0 497 1 431 299 84 43 chr2 217163866 217164195 -33523659 + L2 LINE L2 2737 3080 -192 203 286 0 0 chr2 217164369 217164425 -33523429 + (TAAA)n Simple_repeat Simple_repeat 3 58 0 361 306 88 37 chr2 217164785 217165001 -33522853 + MIR SINE MIR 15 241 -21 267 289 232 24 chr2 217165184 217165430 -33522424 + L3b LINE CR1 1169 1465 -118 330 26 0 0 chr2 217165609 217165648 -33522206 + (TC)n Simple_repeat Simple_repeat 1 39 0 1779 126 39 3 chr2 217165713 217165999 -33521855 + AluSx SINE Alu 5 300 -12 967 275 6 3 chr2 217166183 217166536 -33521318 - L1 LINE L1 -2983 3879 3526 16843 111 14 5 chr2 217166559 217167835 -33520019 - L1PA8 LINE L1 -13 6474 5211 1875 138 59 0 chr2 217167835 217168124 -33519730 - AluSc SINE Alu -3 306 1 16843 111 14 5 chr2 217168124 217171898 -33515956 - L1PA8 LINE L1 -1276 5211 1387 * 41029 52 2 0 chr2 217171897 217178038 -33509816 + L1PA4 LINE L1 2 6152 -3 8236 133 29 8 chr2 217178042 217179015 -33508839 - L1PA8 LINE L1 -5068 1393 383 198 0 0 0 chr2 217179015 217179037 -33508817 + (CAAA)n Simple_repeat Simple_repeat 4 25 0 8236 133 29 8 chr2 217179037 217179423 -33508431 - L1PA8 LINE L1 -6078 383 6 10455 157 115 14 chr2 217179429 217180197 -33507657 - L1PBa LINE L1 -3325 3537 2848 2257 128 0 7 chr2 217180197 217180503 -33507351 - AluSx SINE Alu -8 304 1 10455 157 115 14 chr2 217180503 217182651 -33505203 - L1PBa LINE L1 -4014 2848 327 1199 172 201 7 chr2 217182767 217183046 -33504808 - BaEV-int LTR ERV1 -2622 4027 3695 * 3919 92 34 27 chr2 217183023 217183253 -33504601 - BaEV-int LTR ERV1 -4320 2576 2349 2323 100 0 3 chr2 217183253 217183562 -33504292 - AluY SINE Alu -3 308 1 3919 92 34 27 chr2 217183562 217183988 -33503866 - BaEV-int LTR ERV1 -4547 2349 1912 2821 13 0 0 chr2 217183988 217184297 -33503557 - AluYa5 SINE Alu -2 309 1 3919 92 34 27 chr2 217184297 217184349 -33503505 - BaEV-int LTR ERV1 -4984 1912 1862 4248 257 102 13 chr2 217184349 217185559 -33502295 - L1M2 LINE L1 -5481 1368 51 2228 161 16 44 chr2 217185617 217186053 -33501801 + MSTC LTR MaLR 1 424 -4 438 245 0 0 chr2 217186136 217186234 -33501620 - FRAM SINE Alu -7 169 72 1199 235 34 23 chr2 217186594 217186858 -33500996 - AluJo SINE Alu -23 289 23 2176 223 10 14 chr2 217186976 217187482 -33500372 - MLT1F LTR MaLR 0 542 39 410 307 73 39 chr2 217188451 217188861 -33498993 + L1ME3A LINE L1 5525 5948 -222 201 74 0 0 chr2 217189460 217189487 -33498367 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1861 156 3 3 chr2 217189490 217189772 -33498082 - AluSx SINE Alu -30 282 1 21 0 0 0 chr2 217189773 217189794 -33498060 + AT_rich Low_complexity Low_complexity 1 21 0 2163 118 13 0 chr2 217189972 217190278 -33497576 - AluSq SINE Alu -3 310 1 27 0 0 0 chr2 217190315 217190342 -33497512 + AT_rich Low_complexity Low_complexity 1 27 0 232 246 49 16 chr2 217190615 217190676 -33497178 + L2 LINE L2 3251 3313 0 1600 245 8 62 chr2 217191718 217192252 -33495602 + L1M3e LINE L1 466 970 -6519 2446 234 70 28 chr2 217192470 217193402 -33494452 + L1M3e LINE L1 2017 2987 -4578 1082 215 165 4 chr2 217193402 217193516 -33494338 + AluJb SINE Alu 1 95 -217 276 30 0 0 chr2 217193516 217193549 -33494305 + (CA)n Simple_repeat Simple_repeat 2 34 0 1082 215 165 4 chr2 217193549 217193676 -33494178 + AluJb SINE Alu 95 281 -31 7889 174 62 102 chr2 217193696 217195046 -33492808 + L1M3e LINE L1 2977 4380 -3185 979 227 29 54 chr2 217195046 217195110 -33492744 + AluJo SINE Alu 37 101 -211 1787 149 116 15 chr2 217195110 217195439 -33492415 + THE1B LTR MaLR 3 364 0 11200 93 25 7 chr2 217195439 217196991 -33490863 + THE1B-int LTR MaLR 1 1580 0 2124 131 73 12 chr2 217196991 217197334 -33490520 + THE1B LTR MaLR 1 364 0 979 227 29 54 chr2 217197334 217197545 -33490309 + AluJo SINE Alu 98 307 -5 7889 174 62 102 chr2 217197545 217198949 -33488905 + L1M3e LINE L1 4380 5890 -1675 1849 67 18 0 chr2 217201948 217202172 -33485682 + AluSp SINE Alu 70 297 -16 191 278 69 14 chr2 217203931 217204003 -33483851 - MIR3 SINE MIR -3 205 130 547 310 29 11 chr2 217204063 217204237 -33483617 + MIR SINE MIR 51 227 -35 310 254 119 0 chr2 217205115 217205233 -33482621 - MER94 DNA DNA -2 132 1 257 286 99 0 chr2 217205482 217205573 -33482281 - L2 LINE L2 0 3272 3173 243 229 14 0 chr2 217206308 217206378 -33481476 - MER116 DNA Mariner -5 75 5 318 327 31 43 chr2 217207430 217207592 -33480262 + MIR3 SINE MIR 38 197 -11 313 213 32 90 chr2 217207791 217207946 -33479908 - MER69 DNA AcHobo -1 2525 2380 345 152 15 15 chr2 217208101 217208167 -33479687 - MER69 DNA AcHobo -2460 66 1 1204 199 39 33 chr2 217208327 217208664 -33479190 - L1MD3 LINE L1 0 7995 7657 1743 122 89 0 chr2 217208665 217208935 -33478919 - AluY SINE Alu -17 294 1 1409 102 0 0 chr2 217208963 217209139 -33478715 + AluSq SINE Alu 1 176 -137 498 180 9 8 chr2 217209381 217209503 -33478351 - L1MC4 LINE L1 -345 7650 7437 * 908 214 36 9 chr2 217209490 217209714 -33478140 - L1MD3 LINE L1 -983 7012 6783 247 322 194 22 chr2 217209947 217210174 -33477680 + L2 LINE L2 2434 2699 -615 755 243 18 6 chr2 217210292 217210461 -33477393 - MER5A DNA MER1_type -2 187 17 1079 186 126 85 chr2 217211382 217211865 -33475989 + Charlie4a DNA MER1_type 4 506 -2 182 294 78 98 chr2 217212897 217213050 -33474804 - L2 LINE L2 -365 2949 2800 195 384 68 8 chr2 217213996 217214129 -33473725 - L2 LINE L2 -9 3263 3123 31 26 0 0 chr2 217214563 217214601 -33473253 + AT_rich Low_complexity Low_complexity 1 38 0 689 237 38 21 chr2 217214845 217215031 -33472823 - MER5A DNA MER1_type 0 189 1 21 57 0 0 chr2 217215260 217215295 -33472559 + AT_rich Low_complexity Low_complexity 1 35 0 5018 70 3 50 chr2 217215404 217216127 -33471727 - L1PA7 LINE L1 -3 6466 5778 26282 109 48 16 chr2 217216176 217218937 -33468917 - L1PA7 LINE L1 -708 5779 3109 216 0 0 0 chr2 217218937 217218961 -33468893 + (TA)n Simple_repeat Simple_repeat 2 25 0 26282 109 48 16 chr2 217218961 217219061 -33468793 - L1PA7 LINE L1 -3378 3109 3014 423 0 0 0 chr2 217219061 217219108 -33468746 + (TA)n Simple_repeat Simple_repeat 2 48 0 26282 109 48 16 chr2 217219108 217221818 -33466036 - L1PA7 LINE L1 -3473 3014 5 4534 165 39 24 chr2 217221960 217222818 -33465036 - L1MB1 LINE L1 -51 6117 5273 1994 183 19 8 chr2 217222818 217223179 -33464675 + MLT1A1 LTR MaLR 1 365 0 4534 165 39 24 chr2 217223179 217223193 -33464661 - L1MB1 LINE L1 -895 5273 5261 13793 136 41 14 chr2 217223193 217225546 -33462308 - Tigger1 DNA MER2_type 0 2418 1 4534 165 39 24 chr2 217225546 217225794 -33462060 - L1MB1 LINE L1 -907 5261 4982 2909 136 36 11 chr2 217225802 217226326 -33461528 - L1MA3 LINE L1 0 6305 5769 11687 188 26 13 chr2 217226335 217228145 -33459709 - L1PA15 LINE L1 -21 6795 5010 180 0 0 0 chr2 217228145 217228165 -33459689 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 11687 188 26 13 chr2 217228165 217229926 -33457928 - L1PA15 LINE L1 -1806 5010 3179 3507 186 3 16 chr2 217229924 217230737 -33457117 - L1PA15 LINE L1 -4355 2442 1626 * 590 118 0 0 chr2 217230745 217230830 -33457024 + L1M1 LINE L1 5433 5517 -788 260 105 0 0 chr2 217230823 217230861 -33456993 - L1MA3 LINE L1 -832 5473 5436 * 1519 280 50 72 chr2 217230859 217231477 -33456377 - L1PA15 LINE L1 -5163 1624 586 1326 284 19 3 chr2 217231469 217231786 -33456068 - L1PA15 LINE L1 -6465 322 1 * 2890 138 16 58 chr2 217231793 217232450 -33455404 - L1M1 LINE L1 -524 5781 5154 2890 226 58 59 chr2 217232452 217233919 -33453935 - L1M4c LINE L1 -2883 3499 2024 21 0 0 0 chr2 217233920 217233941 -33453913 + AT_rich Low_complexity Low_complexity 1 21 0 877 227 204 52 chr2 217233960 217234304 -33453550 - MSTD LTR MaLR 0 396 1 2458 243 68 20 chr2 217234320 217234749 -33453105 - L1M4c LINE L1 -4512 1872 1394 2121 158 14 3 chr2 217234749 217235109 -33452745 + MER47A DNA MER2_type 3 366 0 2458 243 68 20 chr2 217235109 217235384 -33452470 - L1M4c LINE L1 -4990 1394 1134 2420 93 0 0 chr2 217235384 217235694 -33452160 - AluSg SINE Alu 0 310 1 772 269 51 27 chr2 217235695 217235994 -33451860 - L1 LINE L1 -4894 1237 916 591 261 67 10 chr2 217236769 217236964 -33450890 - L1 LINE L1 -5934 207 2 346 305 53 15 chr2 217237921 217238052 -33449802 + MER5A DNA MER1_type 1 136 -53 7156 110 8 16 chr2 217238642 217239708 -33448146 - MER11C LTR ERVK -14 1057 1 8172 57 1 0 chr2 217239708 217240704 -33447150 - HERVK11 LTR ERVK 0 7953 6957 3588 63 22 4 chr2 217240687 217241144 -33446710 - HERVK11 LTR ERVK -1184 6769 6305 * 266 24 73 24 chr2 217241142 217241183 -33446671 - HERVK11 LTR ERVK -7910 43 1 * 6891 136 5 17 chr2 217241183 217242267 -33445587 - MER11C LTR ERVK 0 1071 1 237 233 181 35 chr2 217242539 217242655 -33445199 + L2 LINE L2 3138 3270 -2 7150 45 26 6 chr2 217244470 217245349 -33442505 + MER11D LTR ERVK 1 897 0 894 71 94 0 chr2 217246524 217246651 -33441203 + MER85 DNA T2_type 1 139 0 247 250 263 19 chr2 217249181 217249337 -33438517 + MIR SINE MIR 34 227 -35 2138 92 41 7 chr2 217250057 217250349 -33437505 - AluSq SINE Alu -5 308 7 1124 150 129 63 chr2 217251331 217251618 -33436236 - L1MB4 LINE L1 -260 5920 5615 31 58 0 0 chr2 217251791 217251843 -33436011 + AT_rich Low_complexity Low_complexity 1 52 0 2328 116 0 0 chr2 217252287 217252597 -33435257 - AluSq SINE Alu -2 311 2 2210 98 10 0 chr2 217256072 217256367 -33431487 - AluSp SINE Alu -15 298 1 310 256 128 24 chr2 217256496 217256660 -33431194 - L1MC4a LINE L1 -1883 5925 5745 303 316 36 22 chr2 217256693 217256832 -33431022 + L1ME LINE L1 6 146 -5924 186 43 0 0 chr2 217258183 217258206 -33429648 + (TATG)n Simple_repeat Simple_repeat 4 26 0 37 76 0 0 chr2 217259032 217259111 -33428743 + AT_rich Low_complexity Low_complexity 1 79 0 30 27 0 0 chr2 217259753 217259790 -33428064 + AT_rich Low_complexity Low_complexity 1 37 0 30050 99 30 9 chr2 217260083 217265648 -33422206 + L1PA7 LINE L1 766 6468 -1 414 222 156 75 chr2 217265681 217265893 -33421961 - MIR SINE MIR 0 262 34 2041 158 30 7 chr2 217265965 217266369 -33421485 + L1MB4 LINE L1 5765 6177 -3 399 41 0 0 chr2 217268376 217268425 -33419429 + (CA)n Simple_repeat Simple_repeat 1 49 0 262 310 40 30 chr2 217269595 217269695 -33418159 + MIR SINE MIR 33 133 -75 546 283 57 4 chr2 217271748 217271995 -33415859 - HAL1 LINE L1 -4 2503 2244 1331 272 83 13 chr2 217271995 217272465 -33415389 + MLT1J LTR MaLR 1 503 -8 533 336 124 30 chr2 217272483 217272917 -33414937 - L2 LINE L2 -475 2839 2365 22 0 0 0 chr2 217273333 217273355 -33414499 + AT_rich Low_complexity Low_complexity 1 22 0 670 186 0 0 chr2 217273393 217273533 -33414321 + L1 LINE L1 4927 5066 -1080 705 244 56 0 chr2 217273593 217273790 -33414064 - MER3 DNA MER1_type -1 208 1 333 0 0 0 chr2 217273901 217273938 -33413916 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 234 333 0 0 chr2 217275172 217275235 -33412619 - L2 LINE L2 -29 3243 3181 542 261 49 7 chr2 217277213 217277355 -33410499 + MIR SINE MIR 10 157 -105 1155 123 18 0 chr2 217277370 217277540 -33410314 - AluSq SINE Alu -6 307 135 261 284 0 0 chr2 217277541 217277608 -33410246 + MIR SINE MIR 166 232 -30 14051 142 52 15 chr2 217278571 217278848 -33409006 + Tigger2 DNA MER2_type 1 266 -2452 2780 23 0 0 chr2 217278848 217279155 -33408699 + AluYb8 SINE Alu 1 307 -11 14051 142 52 15 chr2 217279155 217280514 -33407340 + Tigger2 DNA MER2_type 266 1773 -945 1430 209 117 15 chr2 217280514 217280916 -33406938 + LTR47B LTR ERVL 1 443 0 14051 142 52 15 chr2 217280916 217281898 -33405956 + Tigger2 DNA MER2_type 1773 2717 -1 1108 226 41 79 chr2 217282613 217283094 -33404760 + MLT1J LTR MaLR 5 501 -10 1195 159 64 0 chr2 217284618 217284838 -33403016 - MER46A DNA MER2_type -2 234 1 317 293 52 35 chr2 217284894 217285010 -33402844 + MER5A DNA MER1_type 6 123 -66 209 301 136 0 chr2 217284925 217285028 -33402826 - MER5A DNA MER1_type -22 167 51 * 2364 103 0 0 chr2 217285206 217285508 -33402346 - AluSc SINE Alu -7 302 1 249 242 32 0 chr2 217286781 217286843 -33401011 + L2 LINE L2 3207 3270 -2 286 273 45 68 chr2 217286856 217286988 -33400866 + MIR SINE MIR 73 201 -61 2213 99 3 10 chr2 217287257 217287575 -33400279 + AluSp SINE Alu 1 313 0 1858 132 3 35 chr2 217288597 217288886 -33398968 + AluSx SINE Alu 1 280 -32 228 100 0 0 chr2 217288886 217288926 -33398928 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1768 163 20 13 chr2 217289496 217289796 -33398058 - AluJo SINE Alu -10 302 1 239 267 117 25 chr2 217291523 217291643 -33396211 - L3b LINE CR1 -135 1448 1318 429 246 90 107 chr2 217292131 217292646 -33395208 - L1M3 LINE L1 -372 5799 5276 461 345 100 7 chr2 217292675 217292965 -33394889 - L1M3 LINE L1 -876 5270 4954 369 159 23 11 chr2 217293057 217293145 -33394709 + CT-rich Low_complexity Low_complexity 4 92 0 1510 168 62 24 chr2 217293219 217293486 -33394368 - MLT1B LTR MaLR 0 390 104 2100 77 4 0 chr2 217293486 217293747 -33394107 - AluSx SINE Alu -5 307 46 1510 168 62 24 chr2 217293747 217293849 -33394005 - MLT1B LTR MaLR -286 104 7 373 301 129 0 chr2 217294411 217294574 -33393280 - MLT1J LTR MaLR -312 199 16 183 162 0 0 chr2 217294815 217294852 -33393002 + (CA)n Simple_repeat Simple_repeat 2 38 0 183 211 452 10 chr2 217296344 217296448 -33391406 - MER5A DNA MER1_type 0 189 40 1779 126 39 3 chr2 217296470 217296756 -33391098 - AluSx SINE Alu -12 300 5 330 26 0 0 chr2 217296821 217296860 -33390994 + (GA)n Simple_repeat Simple_repeat 1 39 0 267 289 232 24 chr2 217297039 217297285 -33390569 - L3b LINE CR1 -118 1465 1169 361 306 88 37 chr2 217297468 217297684 -33390170 - MIR SINE MIR -21 241 15 203 286 0 0 chr2 217298044 217298100 -33389754 + (TTTA)n Simple_repeat Simple_repeat 3 58 0 431 299 84 43 chr2 217298274 217298603 -33389251 - L2 LINE L2 -192 3080 2737 3125 133 20 2 chr2 217298603 217299091 -33388763 + LOR1a LTR ERV1 1 497 0 2444 76 0 13 chr2 217299110 217299425 -33388429 + AluY SINE Alu 1 311 0 2316 208 49 95 chr2 217299435 217300222 -33387632 - L1ME1 LINE L1 -10 6156 5334 222 118 0 0 chr2 217300222 217300256 -33387598 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 * 486 88 0 0 chr2 217300255 217300323 -33387531 + (CA)n Simple_repeat Simple_repeat 2 69 0 2316 208 49 95 chr2 217300256 217300544 -33387310 - L1ME1 LINE L1 -832 5334 5167 499 261 27 43 chr2 217300646 217300679 -33387175 + LTR16A LTR ERVL 260 292 -158 2218 116 3 0 chr2 217300679 217300973 -33386881 - AluSp SINE Alu -18 295 1 499 261 27 43 chr2 217300973 217301127 -33386727 + LTR16A LTR ERVL 292 444 -6 207 0 0 0 chr2 217301146 217301169 -33386685 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 26 30 0 0 chr2 217303018 217303051 -33384803 + AT_rich Low_complexity Low_complexity 1 33 0 397 101 25 0 chr2 217303908 217303920 -33383934 + GA-rich Low_complexity Low_complexity 3 13 -70 2259 42 0 0 chr2 217303920 217304179 -33383675 + AluY SINE Alu 41 299 -12 397 101 25 0 chr2 217304179 217304245 -33383609 + GA-rich Low_complexity Low_complexity 13 83 0 2304 89 20 3 chr2 217305472 217305774 -33382080 - AluSc SINE Alu 0 309 3 1665 204 48 13 chr2 217306868 217307343 -33380511 - Charlie4a DNA MER1_type 0 508 17 535 250 147 6 chr2 217309081 217309237 -33378617 + MER5B DNA MER1_type 1 178 0 465 205 16 8 chr2 217309555 217309682 -33378172 + MER96B DNA MER1_type? 56 183 -234 219 88 0 0 chr2 217310014 217310048 -33377806 + (TG)n Simple_repeat Simple_repeat 1 34 0 248 228 0 13 chr2 217310075 217310154 -33377700 + CT-rich Low_complexity Low_complexity 4 81 0 480 282 53 0 chr2 217310685 217310816 -33377038 - L2 LINE L2 -463 2851 2714 533 242 175 28 chr2 217310851 217311103 -33376751 + L2 LINE L2 2883 3171 -142 4819 127 27 20 chr2 217311550 217312045 -33375809 - L1PA16 LINE L1 0 6166 5661 300 53 0 0 chr2 217312045 217312083 -33375771 + (TA)n Simple_repeat Simple_repeat 2 39 0 4819 127 27 20 chr2 217312083 217312440 -33375414 - L1PA16 LINE L1 -505 5661 5308 1463 194 16 24 chr2 217312440 217312821 -33375033 - L1 LINE L1 -1622 4524 4147 6596 195 8 10 chr2 217312826 217314059 -33373795 - L1PA15-16 LINE L1 -5592 1257 24 2047 130 52 33 chr2 217314059 217314427 -33373427 - THE1C LTR MaLR 0 375 1 10737 106 6 30 chr2 217314429 217316046 -33371808 - THE1C-int LTR MaLR -2 1578 1 1965 146 64 14 chr2 217316046 217316403 -33371451 - THE1C LTR MaLR 0 375 1 6596 195 8 10 chr2 217316403 217316516 -33371338 - L1PA15-16 LINE L1 -6824 25 3 289 86 35 0 chr2 217316531 217316589 -33371265 + (TA)n Simple_repeat Simple_repeat 1 60 0 301 286 8 34 chr2 217316600 217316719 -33371135 - L1MC4 LINE L1 -1323 6719 6604 419 322 22 33 chr2 217317039 217317219 -33370635 - MER5B DNA MER1_type 0 178 1 936 261 23 0 chr2 217318531 217318749 -33369105 - MIR SINE MIR -2 260 38 612 63 0 0 chr2 217319402 217319481 -33368373 - MADE1 DNA Mariner -1 79 1 26778 40 4 2 chr2 217319584 217325708 -33362146 + L1PA4 LINE L1 18 6154 -1 203 356 68 23 chr2 217326134 217326311 -33361543 + L2 LINE L2 2266 2450 -864 3395 128 8 2 chr2 217326367 217326883 -33360971 - L1PA16 LINE L1 -6 6160 5642 468 156 0 0 chr2 217326900 217327009 -33360845 + (TA)n Simple_repeat Simple_repeat 1 109 0 308 279 0 23 chr2 217327013 217327099 -33360755 + L1MC4 LINE L1 6618 6701 -1341 346 223 0 43 chr2 217327121 217327215 -33360639 + L1MC4 LINE L1 6614 6703 -1339 314 274 0 21 chr2 217327257 217327352 -33360502 + L1MC4 LINE L1 6614 6706 -1336 9348 211 16 25 chr2 217327360 217330455 -33357399 - L1P4 LINE L1 -529 5637 2555 212 321 253 17 chr2 217330501 217330981 -33356873 + L2 LINE L2 2474 3047 -225 1114 262 16 10 chr2 217332468 217332773 -33355081 + MLT1J LTR MaLR 13 319 -192 216 368 144 5 chr2 217332956 217333157 -33354697 + L2 LINE L2 2257 2485 -829 348 264 11 0 chr2 217333805 217333892 -33353962 + LTR67 LTR ERVL 115 202 -355 2115 252 23 38 chr2 217334329 217334461 -33353393 - L1ME1 LINE L1 -5 6161 6029 2048 69 4 0 chr2 217334461 217334723 -33353131 - L1PA8 LINE L1 -1 6171 5909 2115 252 23 38 chr2 217334723 217335363 -33352491 - L1ME1 LINE L1 -137 6029 5400 299 282 67 0 chr2 217335482 217335677 -33352177 - L1MDa LINE L1 -4779 1436 1229 1606 231 104 4 chr2 217335686 217336244 -33351610 - L1MDa LINE L1 -5224 1172 559 413 206 140 0 chr2 217336254 217336361 -33351493 - L1MDa LINE L1 -5894 502 381 * 598 159 35 7 chr2 217336353 217336498 -33351356 - L1ME1 LINE L1 -865 5281 5133 494 348 30 6 chr2 217337178 217337342 -33350512 + MIR3 SINE MIR 10 177 -31 1718 157 42 18 chr2 217337559 217337896 -33349958 - L1PB4 LINE L1 -56 6100 5756 422 292 9 9 chr2 217338515 217338628 -33349226 - L2 LINE L2 -4 3309 3197 345 47 0 0 chr2 217339971 217340014 -33347840 + (GA)n Simple_repeat Simple_repeat 1 43 0 264 224 15 0 chr2 217340014 217340081 -33347773 + GA-rich Low_complexity Low_complexity 4 71 0 2575 72 0 0 chr2 217340230 217340563 -33347291 + L1PA7 LINE L1 5820 6152 -2 449 342 79 5 chr2 217340580 217340770 -33347084 + MIR SINE MIR 41 244 -18 361 51 68 0 chr2 217341145 217341204 -33346650 - MADE1 DNA Mariner 0 80 18 202 216 0 0 chr2 217341534 217341571 -33346283 - MIR3 SINE MIR -21 187 151 277 306 47 0 chr2 217341708 217341793 -33346061 + L2 LINE L2 3002 3090 -182 189 0 0 0 chr2 217342984 217343005 -33344849 + (T)n Simple_repeat Simple_repeat 1 21 0 288 237 118 30 chr2 217344697 217344832 -33343022 - MIR SINE MIR -49 213 67 258 245 80 86 chr2 217344949 217345112 -33342742 + MER5A DNA MER1_type 28 189 0 902 244 9 23 chr2 217347515 217347732 -33340122 - MIR SINE MIR -28 234 21 222 91 0 0 chr2 217349979 217350012 -33337842 + (T)n Simple_repeat Simple_repeat 1 33 0 353 316 79 0 chr2 217350123 217350237 -33337617 - MIR SINE MIR -93 169 47 1371 167 58 0 chr2 217350622 217350880 -33336974 + AluSx SINE Alu 1 273 -39 2155 116 7 0 chr2 217350881 217351174 -33336680 - AluSq SINE Alu -18 295 1 243 256 47 0 chr2 217351246 217351332 -33336522 - L1ME LINE L1 -224 5897 5808 367 239 99 21 chr2 217351341 217351483 -33336371 - L2 LINE L2 -1 3312 3160 2415 87 3 10 chr2 217351483 217351795 -33336059 + AluSp SINE Alu 1 310 -3 1123 102 6 42 chr2 217351796 217351962 -33335892 + AluSp SINE Alu 130 289 -24 725 184 5 70 chr2 217352071 217352256 -33335598 + MLT1B LTR MaLR 1 173 -217 2281 91 13 0 chr2 217352260 217352567 -33335287 + AluY SINE Alu 1 311 0 237 229 29 86 chr2 217352667 217352737 -33335117 + MIR SINE MIR 79 144 -118 2139 116 0 0 chr2 217352779 217353071 -33334783 + AluSx SINE Alu 5 296 -16 282 324 43 58 chr2 217353444 217353583 -33334271 - L2 LINE L2 0 3272 3136 685 269 131 18 chr2 217353597 217353697 -33334157 - MLT1J LTR MaLR -196 315 228 2134 114 13 22 chr2 217353697 217353836 -33334018 + AluSx SINE Alu 1 140 -172 2042 118 0 33 chr2 217353836 217354142 -33333712 + AluSg SINE Alu 1 296 -14 2134 114 13 22 chr2 217354142 217354317 -33333537 + AluSx SINE Alu 140 312 0 685 269 131 18 chr2 217354317 217354499 -33333355 - MLT1J LTR MaLR -283 228 1 2359 94 0 0 chr2 217354550 217354849 -33333005 + AluSg SINE Alu 1 299 -11 192 97 0 0 chr2 217354860 217354891 -33332963 + (TCTCTG)n Simple_repeat Simple_repeat 1 31 0 604 171 35 141 chr2 217356395 217356460 -33331394 + MER5B DNA MER1_type 1 71 -107 2018 145 10 3 chr2 217356460 217356770 -33331084 + AluSx SINE Alu 1 312 0 604 171 35 141 chr2 217356770 217356903 -33330951 + MER5B DNA MER1_type 71 178 0 322 240 125 0 chr2 217356927 217357023 -33330831 + MIR3 SINE MIR 68 175 -33 360 217 12 12 chr2 217357425 217357508 -33330346 + MLT1F1 LTR MaLR 11 93 -474 1912 198 131 4 chr2 217357508 217358018 -33329836 + L1MD3 LINE L1 7404 7978 -17 24 85 0 0 chr2 217358299 217358358 -33329496 + AT_rich Low_complexity Low_complexity 1 59 0 289 200 107 79 chr2 217358762 217358902 -33328952 + MLT1I LTR MaLR 240 383 -26 205 319 64 35 chr2 217359381 217359522 -33328332 + MIR SINE MIR 28 172 -90 3474 166 58 11 chr2 217359746 217360564 -33327290 + L1 LINE L1 2872 3727 -2419 * 6489 183 30 19 chr2 217360563 217361937 -33325917 + L1M1 LINE L1 13 1401 -6164 661 332 61 40 chr2 217362142 217362537 -33325317 + L2 LINE L2 2911 3313 0 189 341 227 0 chr2 217362647 217362779 -33325075 - MIR3 SINE MIR -4 204 43 933 189 6 17 chr2 217362868 217363048 -33324806 + MER20 DNA MER1_type 37 214 -5 880 259 67 39 chr2 217363219 217363713 -33324141 - L1ME4a LINE L1 -4 6117 5610 200 356 119 0 chr2 217363997 217364115 -33323739 - MIR SINE MIR -78 184 53 1988 122 11 11 chr2 217365393 217365680 -33322174 - AluSg SINE Alu -13 297 11 220 243 0 0 chr2 217367489 217367526 -33320328 - MIR SINE MIR -197 65 29 1666 194 7 0 chr2 217367589 217367878 -33319976 + AluJo SINE Alu 1 291 -21 338 215 156 81 chr2 217368241 217368427 -33319427 - MIR SINE MIR -47 215 16 189 347 121 45 chr2 217368533 217368913 -33318941 - L2 LINE L2 -1729 1585 1177 833 249 57 20 chr2 217369079 217369324 -33318530 + MIR SINE MIR 9 262 0 1728 212 19 23 chr2 217369456 217369928 -33317926 - L1M4 LINE L1 -1763 4383 3914 660 82 0 0 chr2 217370036 217370121 -33317733 - AluS SINE Alu -227 85 1 2245 92 7 30 chr2 217370198 217370502 -33317352 - AluSx SINE Alu -15 297 1 25 0 0 0 chr2 217370994 217371019 -33316835 + AT_rich Low_complexity Low_complexity 1 25 0 2210 96 10 0 chr2 217371533 217371825 -33316029 - AluY SINE Alu -3 308 14 534 227 0 0 chr2 217372268 217372378 -33315476 - AluY SINE Alu 0 311 202 618 153 32 8 chr2 217372624 217372748 -33315106 + AluSc SINE Alu 162 288 -21 26 0 0 0 chr2 217373793 217373819 -33314035 + GC_rich Low_complexity Low_complexity 1 26 0 474 98 0 37 chr2 217375010 217375092 -33312762 - L1MB8 LINE L1 0 6178 6100 203 331 131 8 chr2 217375489 217375619 -33312235 + L2 LINE L2 3127 3272 0 484 247 67 37 chr2 217375754 217375950 -33311904 - MLT1G LTR MaLR -50 545 344 245 230 203 0 chr2 217376022 217376096 -33311758 - MLT1G LTR MaLR -244 311 223 1090 165 0 0 chr2 217376577 217376747 -33311107 - AluSg/x SINE Alu -8 304 135 2222 86 20 20 chr2 217376748 217377049 -33310805 - AluSc SINE Alu -8 301 1 2045 111 14 10 chr2 217377085 217377373 -33310481 - AluSx SINE Alu -17 295 7 2251 121 0 0 chr2 217378671 217378969 -33308885 + AluSq SINE Alu 1 298 -15 6862 136 19 33 chr2 217379878 217381083 -33306771 - L1P3 LINE L1 -5269 1192 5 3312 170 41 3 chr2 217381222 217381835 -33306019 - L1MB1 LINE L1 -48 6120 5485 372 271 109 52 chr2 217382002 217382194 -33305660 + MIR SINE MIR 26 228 -34 40 67 0 0 chr2 217382995 217383070 -33304784 + AT_rich Low_complexity Low_complexity 1 75 0 2092 133 10 0 chr2 217383161 217383454 -33304400 + AluSg SINE Alu 1 296 -14 259 241 125 9 chr2 217383639 217383751 -33304103 - MIR SINE MIR -50 212 88 444 138 69 0 chr2 217384901 217384988 -33302866 - Charlie1a DNA MER1_type -47 1408 1316 562 155 10 10 chr2 217385012 217385109 -33302745 - MER20 DNA MER1_type -4 215 119 3635 186 112 81 chr2 217385149 217385303 -33302551 - Charlie1a DNA MER1_type -1487 1274 1126 338 123 0 41 chr2 217385303 217385376 -33302478 - L1PA16 LINE L1 0 6166 6097 3635 186 112 81 chr2 217385376 217385499 -33302355 - Charlie1a DNA MER1_type -1635 1126 1008 2281 105 3 10 chr2 217385499 217385812 -33302042 - AluSx SINE Alu -1 311 1 3635 186 112 81 chr2 217385812 217386003 -33301851 - Charlie1a DNA MER1_type -1753 1008 824 2084 141 13 3 chr2 217386003 217386307 -33301547 - AluSx SINE Alu -5 307 1 3635 186 112 81 chr2 217386307 217386506 -33301348 - Charlie1a DNA MER1_type -1937 824 633 2095 122 10 16 chr2 217386506 217386817 -33301037 - AluSx SINE Alu -3 309 1 3635 186 112 81 chr2 217386817 217387382 -33300472 - Charlie1a DNA MER1_type -2128 633 1 254 111 22 0 chr2 217387654 217387699 -33300155 + Alu SINE Alu 255 300 0 317 252 111 44 chr2 217387933 217388068 -33299786 - L1M2 LINE L1 -477 5823 5680 1756 61 9 0 chr2 217388068 217388281 -33299573 + AluY SINE Alu 81 295 -16 1789 132 36 30 chr2 217388909 217389212 -33298642 + AluJo SINE Alu 1 305 -7 21 0 0 0 chr2 217389879 217389900 -33297954 + AT_rich Low_complexity Low_complexity 1 21 0 2080 135 3 3 chr2 217391206 217391517 -33296337 + AluY SINE Alu 1 311 0 721 166 0 58 chr2 217391703 217391842 -33296012 - FLAM_C SINE Alu -2 131 1 509 90 0 51 chr2 217391912 217391990 -33295864 + AluJ/FRAM SINE Alu 222 295 -17 2371 65 14 7 chr2 217392354 217392646 -33295208 + AluSq SINE Alu 1 294 -19 302 268 161 30 chr2 217392669 217392837 -33295017 - L2 LINE L2 -2127 1187 998 1055 158 147 2 chr2 217393145 217393434 -33294420 - L1M2 LINE L1 -665 5515 5178 265 224 141 0 chr2 217393623 217393708 -33294146 - L1ME LINE L1 -324 5797 5701 2317 63 7 30 chr2 217394123 217394426 -33293428 + AluSq SINE Alu 1 296 -17 312 214 0 0 chr2 217394710 217394766 -33293088 + MLT1K LTR MaLR 5 60 -528 434 240 70 16 chr2 217394781 217394910 -33292944 + MIR SINE MIR 15 150 -112 587 293 188 17 chr2 217395023 217395374 -33292480 + MLT1K LTR MaLR 105 515 -73 830 164 22 0 chr2 217395474 217395608 -33292246 + MSTB LTR MaLR 290 426 0 2351 178 61 6 chr2 217395608 217396113 -33291741 + L1MC/D LINE L1 4867 5399 -747 2533 11 7 3 chr2 217396155 217396440 -33291414 - AluY SINE Alu -25 286 1 449 271 105 33 chr2 217396773 217397110 -33290744 + LTR16A LTR ERVL 58 450 0 1926 83 26 8 chr2 217397406 217397670 -33290184 + AluY SINE Alu 2 270 -41 2032 227 46 26 chr2 217398265 217398880 -33288974 - L1M4c LINE L1 -4540 1844 1238 1956 163 0 0 chr2 217398960 217399260 -33288594 + AluSx SINE Alu 1 300 -12 2187 121 3 3 chr2 217399277 217399583 -33288271 + AluSq SINE Alu 6 311 -2 2243 86 13 20 chr2 217400079 217400380 -33287474 + AluSg SINE Alu 1 299 -11 314 206 98 22 chr2 217400380 217400461 -33287393 + MIR SINE MIR 172 262 0 1725 162 3 17 chr2 217400558 217400848 -33287006 - AluJb SINE Alu -18 294 9 994 212 0 27 chr2 217400948 217401246 -33286608 - MLT1D LTR MaLR -172 333 6 2233 123 0 10 chr2 217401262 217401572 -33286282 - AluSx SINE Alu -5 307 1 231 309 12 0 chr2 217402181 217402262 -33285592 - L1ME LINE L1 -297 5824 5743 2507 50 10 0 chr2 217402424 217402721 -33285133 + AluY SINE Alu 1 300 -11 389 290 104 43 chr2 217402965 217403293 -33284561 - L2 LINE L2 -12 3301 2954 2038 123 0 3 chr2 217403504 217403788 -33284066 - AluY SINE Alu -28 283 1 1728 153 29 11 chr2 217403820 217404101 -33283753 + AluJb SINE Alu 10 295 -17 322 271 141 15 chr2 217404194 217404393 -33283461 + L1MC/D LINE L1 5408 5631 -2177 2344 62 0 14 chr2 217405532 217405821 -33282033 - AluSg SINE Alu -23 287 3 813 152 0 36 chr2 217407029 217407167 -33280687 - FLAM_A SINE Alu 0 133 1 336 264 64 29 chr2 217408348 217408488 -33279366 - Charlie8 DNA MER1_type -2131 286 142 270 217 9 122 chr2 217408514 217408537 -33279317 - Charlie8 DNA MER1_type -203 138 114 1517 156 145 39 chr2 217408537 217408850 -33279004 + MSTD LTR MaLR 1 358 -38 2247 98 0 14 chr2 217408850 217409147 -33278707 - AluSg SINE Alu -13 297 5 1517 156 145 39 chr2 217409147 217409191 -33278663 + MSTD LTR MaLR 358 396 0 270 217 9 122 chr2 217409191 217409282 -33278572 - Charlie8 DNA MER1_type -227 114 37 306 0 0 0 chr2 217409832 217409866 -33277988 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 308 314 9 0 chr2 217410512 217410617 -33277237 + L2 LINE L2 2920 3025 -288 207 282 42 0 chr2 217410970 217411041 -33276813 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 435 278 80 17 chr2 217411189 217411365 -33276489 - MIR SINE MIR -3 259 73 2317 85 3 0 chr2 217411559 217411892 -33275962 + AluSx SINE Alu 1 334 0 381 197 174 76 chr2 217412335 217412467 -33275387 + MER5A DNA MER1_type 13 157 -32 1835 145 34 24 chr2 217413561 217413858 -33273996 - AluSg SINE Alu -10 300 1 2178 121 13 0 chr2 217414304 217414602 -33273252 - AluSx SINE Alu -10 302 1 1477 88 5 16 chr2 217415565 217415759 -33272095 - AluSg/x SINE Alu -19 291 100 243 191 0 0 chr2 217415762 217415825 -33272029 + T-rich Low_complexity Low_complexity 1 63 0 2211 68 7 4 chr2 217415870 217416148 -33271706 + AluY SINE Alu 30 308 -3 2122 137 0 0 chr2 217416194 217416493 -33271361 - AluSx SINE Alu -13 299 1 230 284 55 0 chr2 217416769 217416878 -33270976 + MIR SINE MIR 48 162 -100 824 220 25 34 chr2 217417058 217417294 -33270560 + MER96B DNA MER1_type? 4 237 -180 527 168 128 5 chr2 217417941 217418137 -33269717 + AluSp SINE Alu 79 298 -15 1944 102 23 30 chr2 217418151 217418454 -33269400 + AluSp SINE Alu 1 301 -12 2283 107 3 0 chr2 217418572 217418872 -33268982 + AluSx SINE Alu 1 301 -11 567 308 14 61 chr2 217419697 217419976 -33267878 - MER102a DNA MER1_type -19 311 46 1630 59 118 0 chr2 217420150 217420354 -33267500 + AluY SINE Alu 1 228 -83 1080 137 80 0 chr2 217420437 217420563 -33267291 + AluJo SINE Alu 1 146 -166 255 61 0 0 chr2 217420563 217420596 -33267258 + (CA)n Simple_repeat Simple_repeat 2 34 0 1080 137 80 0 chr2 217420596 217420644 -33267210 + AluJo SINE Alu 146 189 -123 2491 82 3 0 chr2 217421204 217421507 -33266347 - AluSg SINE Alu -6 304 1 1612 122 32 0 chr2 217421508 217421754 -33266100 - L1MB3 LINE L1 -153 6030 5777 1431 70 5 0 chr2 217421754 217421939 -33265915 - AluY SINE Alu -7 304 119 513 281 105 4 chr2 217422181 217422409 -33265445 - HAL1 LINE L1 -207 2300 2050 947 290 108 22 chr2 217422620 217422939 -33264915 - HAL1 LINE L1 -541 1966 1676 2462 87 6 0 chr2 217422939 217423250 -33264604 - AluSq SINE Alu 0 313 1 1994 176 0 0 chr2 217423251 217423563 -33264291 - AluJb SINE Alu 0 312 1 947 290 108 22 chr2 217423563 217423779 -33264075 - HAL1 LINE L1 -830 1677 1383 2082 117 10 0 chr2 217423782 217424080 -33263774 - AluSg SINE Alu -9 301 1 27 0 0 0 chr2 217424676 217424703 -33263151 + AT_rich Low_complexity Low_complexity 1 27 0 572 135 0 34 chr2 217424710 217424799 -33263055 - AluJ/FLAM SINE Alu -226 86 1 874 156 19 7 chr2 217425060 217425214 -33262640 - AluJb SINE Alu -20 292 137 2157 80 4 7 chr2 217425224 217425499 -33262355 - AluSc SINE Alu -20 289 16 241 167 0 0 chr2 217425499 217425535 -33262319 - AluSc SINE Alu -264 36 1 1855 157 73 24 chr2 217425817 217426349 -33261505 - MLT2A2 LTR ERVL 0 554 1 373 233 69 31 chr2 217427139 217427298 -33260556 + L2 LINE L2 2740 2904 -410 1058 135 20 107 chr2 217427383 217427627 -33260227 - MLT1B LTR MaLR -4 386 164 2332 114 3 0 chr2 217427631 217427939 -33259915 - AluSp SINE Alu -4 309 1 219 103 0 0 chr2 217428048 217428087 -33259767 + (TA)n Simple_repeat Simple_repeat 2 40 0 23683 80 6 17 chr2 217428475 217432767 -33255087 - L1PA4 LINE L1 -1 6154 1909 986 119 103 0 chr2 217433027 217433270 -33254584 - AluSx SINE Alu -36 276 9 2115 100 20 3 chr2 217433302 217433603 -33254251 - AluSq SINE Alu -6 307 2 261 304 27 45 chr2 217434003 217434115 -33253739 + MIR SINE MIR 24 133 -129 889 137 0 0 chr2 217434523 217434647 -33253207 + FLAM_C SINE Alu 1 124 -9 2298 83 10 0 chr2 217434657 217434946 -33252908 + AluY SINE Alu 1 292 -19 254 189 27 27 chr2 217434980 217435054 -33252800 + Charlie2 DNA MER1_type 2468 2541 -321 2393 89 0 3 chr2 217435246 217435550 -33252304 + AluSg SINE Alu 1 303 -7 4227 137 28 22 chr2 217435550 217436325 -33251529 + L1MB2 LINE L1 5390 6169 -2 645 306 215 15 chr2 217436929 217437325 -33250529 - L2 LINE L2 0 3313 2839 829 250 109 36 chr2 217437331 217437726 -33250128 + Charlie7 DNA MER1_type 1875 2307 -305 2071 143 0 0 chr2 217437726 217438019 -33249835 + AluSx SINE Alu 1 293 -19 829 250 109 36 chr2 217438019 217438063 -33249791 + Charlie7 DNA MER1_type 2307 2346 -266 36 40 0 0 chr2 217438068 217438118 -33249736 + AT_rich Low_complexity Low_complexity 1 50 0 1717 137 61 24 chr2 217438308 217438601 -33249253 + AluJo SINE Alu 1 304 -8 1120 171 4 22 chr2 217439106 217439334 -33248520 - L1MC1 LINE L1 -13 6320 6097 224 330 80 0 chr2 217442000 217442088 -33245766 - L2 LINE L2 -10 3262 3168 292 327 72 95 chr2 217442287 217442599 -33245255 - L2 LINE L2 -339 2975 2657 2350 87 10 3 chr2 217442599 217442898 -33244956 + AluSq SINE Alu 1 301 -12 292 327 72 95 chr2 217442898 217443322 -33244532 - L2 LINE L2 -657 2657 2256 224 280 0 0 chr2 217443446 217443496 -33244358 + MER5A DNA MER1_type 4 53 -136 245 231 46 15 chr2 217443741 217443806 -33244048 - MIR SINE MIR -88 174 108 2208 116 3 0 chr2 217443902 217444195 -33243659 - AluSq SINE Alu -19 294 1 291 275 0 0 chr2 217444241 217444310 -33243544 - MIR3 SINE MIR -3 205 137 979 97 0 0 chr2 217444325 217444472 -33243382 - AluSg/x SINE Alu 0 305 159 * 1163 101 22 249 chr2 217444471 217444836 -33243018 - AluSq SINE Alu -31 282 1 2194 115 0 0 chr2 217445192 217445488 -33242366 + AluSx SINE Alu 1 296 -16 189 0 0 0 chr2 217445672 217445693 -33242161 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 2158 91 7 14 chr2 217446455 217446770 -33241084 - AluSq SINE Alu 0 315 3 1582 156 35 35 chr2 217446836 217447125 -33240729 - AluJo SINE Alu -23 289 1 185 270 63 0 chr2 217447630 217447693 -33240161 - MIR SINE MIR -88 174 108 360 218 190 35 chr2 217448670 217448812 -33239042 + L2 LINE L2 3095 3258 -55 2304 91 3 7 chr2 217449587 217449894 -33237960 + AluY SINE Alu 1 306 -5 2093 78 10 39 chr2 217450435 217450742 -33237112 - AluSx SINE Alu -14 298 1 2267 118 0 0 chr2 217450890 217451196 -33236658 - AluSx SINE Alu -6 306 1 22 35 0 0 chr2 217452558 217452587 -33235267 + AT_rich Low_complexity Low_complexity 1 29 0 788 181 6 56 chr2 217452751 217452911 -33234943 + FRAM SINE Alu 2 153 -13 204 97 0 0 chr2 217454192 217454223 -33233631 + (T)n Simple_repeat Simple_repeat 1 31 0 391 289 79 0 chr2 217454334 217454448 -33233406 - MIR SINE MIR -93 169 47 2504 39 0 20 chr2 217454704 217455009 -33232845 - AluY SINE Alu -12 299 1 25 65 0 0 chr2 217456825 217456871 -33230983 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr2 217457119 217457140 -33230714 + AT_rich Low_complexity Low_complexity 1 21 0 567 325 47 0 chr2 217457467 217457658 -33230196 + MIR SINE MIR 63 262 0 24 0 0 0 chr2 217457807 217457831 -33230023 + AT_rich Low_complexity Low_complexity 1 24 0 365 291 46 76 chr2 217458762 217458980 -33228874 - L1ME LINE L1 -411 5710 5485 423 236 91 9 chr2 217458998 217459108 -33228746 - MIR SINE MIR -74 188 70 933 320 123 46 chr2 217460311 217461265 -33226589 + L2 LINE L2 774 1869 -1445 304 291 34 17 chr2 217461282 217461399 -33226455 - LTR16A1 LTR ERVL -142 315 197 393 218 10 20 chr2 217461450 217461551 -33226303 - LTR16A1 LTR ERVL -357 100 1 510 318 162 30 chr2 217461580 217461946 -33225908 + L2 LINE L2 2662 3068 -245 234 282 214 23 chr2 217462084 217462215 -33225639 + L2 LINE L2 3158 3313 0 193 295 16 0 chr2 217462738 217462823 -33225031 - MIR SINE MIR -59 149 64 22 0 0 0 chr2 217462889 217462911 -33224943 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 217464041 217464063 -33223791 + AT_rich Low_complexity Low_complexity 1 22 0 237 327 77 19 chr2 217464503 217464607 -33223247 + L2 LINE L2 3159 3268 -4 21 36 0 0 chr2 217465805 217465833 -33222021 + AT_rich Low_complexity Low_complexity 1 28 0 252 185 0 0 chr2 217467024 217467078 -33220776 + CT-rich Low_complexity Low_complexity 1 54 0 546 264 63 13 chr2 217468770 217468929 -33218925 + MIR SINE MIR 20 186 -76 22 0 0 0 chr2 217469193 217469215 -33218639 + AT_rich Low_complexity Low_complexity 1 22 0 234 296 49 0 chr2 217469853 217469934 -33217920 - L3 LINE CR1 -1210 367 283 225 302 116 11 chr2 217471248 217471437 -33216417 + L1ME4a LINE L1 5386 5594 -527 316 284 20 10 chr2 217471473 217471575 -33216279 + L1ME4a LINE L1 5793 5895 -226 369 266 0 46 chr2 217472428 217472537 -33215317 - L1MC4 LINE L1 -1324 6718 6615 333 303 0 0 chr2 217472550 217472639 -33215215 + L1MC4 LINE L1 6614 6702 -1340 183 80 0 0 chr2 217472640 217472665 -33215189 + (TA)n Simple_repeat Simple_repeat 2 26 0 832 38 0 0 chr2 217473036 217473142 -33214712 + L1HS LINE L1 6050 6155 0 279 0 0 0 chr2 217473220 217473251 -33214603 + (CA)n Simple_repeat Simple_repeat 2 32 0 22 56 0 0 chr2 217474245 217474281 -33213573 + AT_rich Low_complexity Low_complexity 1 36 0 245 257 0 27 chr2 217476322 217476396 -33211458 + GA-rich Low_complexity Low_complexity 5 76 0 210 71 0 0 chr2 217476411 217476439 -33211415 + (GA)n Simple_repeat Simple_repeat 1 28 0 327 253 96 55 chr2 217478052 217478198 -33209656 + MIR SINE MIR 1 143 -65 186 43 0 0 chr2 217478600 217478623 -33209231 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 311 254 14 0 chr2 217479575 217479646 -33208208 + MER96 DNA MER1_type? 6 77 -98 187 111 0 0 chr2 217481898 217481925 -33205929 + L3 LINE CR1 967 993 -584 2512 30 0 3 chr2 217482764 217483059 -33204795 - AluY SINE Alu -17 294 1 2020 119 11 11 chr2 217483094 217483425 -33204429 + AluSx SINE Alu 1 331 0 23 33 0 0 chr2 217483663 217483693 -33204161 + AT_rich Low_complexity Low_complexity 1 30 0 461 329 156 11 chr2 217484250 217484603 -33203251 - LTR16A LTR ERVL -9 441 38 446 258 99 17 chr2 217484990 217485167 -33202687 + MIR SINE MIR 6 192 -62 756 280 62 14 chr2 217487457 217487732 -33200122 - L2 LINE L2 -12 3301 3014 21 36 0 0 chr2 217487778 217487806 -33200048 + AT_rich Low_complexity Low_complexity 1 28 0 246 213 62 62 chr2 217487994 217488074 -33199780 + L2 LINE L2 3193 3272 0 184 310 121 0 chr2 217489212 217489270 -33198584 + MER5B DNA MER1_type 23 87 -91 28 0 0 0 chr2 217489516 217489544 -33198310 + AT_rich Low_complexity Low_complexity 1 28 0 206 219 0 0 chr2 217489731 217489772 -33198082 + (CA)n Simple_repeat Simple_repeat 2 42 0 528 16 0 0 chr2 217490239 217490300 -33197554 + (TG)n Simple_repeat Simple_repeat 2 62 0 619 226 101 59 chr2 217490429 217490864 -33196990 - L1MC5 LINE L1 -70 7891 7326 180 237 26 0 chr2 217491215 217491253 -33196601 + MIR3 SINE MIR 149 187 -21 538 320 0 0 chr2 217492463 217492591 -33195263 + MIR3 SINE MIR 33 160 -48 21 0 0 0 chr2 217492794 217492815 -33195039 + AT_rich Low_complexity Low_complexity 1 21 0 243 0 0 0 chr2 217493900 217493927 -33193927 + (CA)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr2 217494121 217494144 -33193710 + AT_rich Low_complexity Low_complexity 1 23 0 320 268 102 31 chr2 217494148 217494275 -33193579 - L1ME1 LINE L1 -5 6161 6026 337 299 0 10 chr2 217496246 217496343 -33191511 + MIR SINE MIR 40 135 -73 2217 88 0 16 chr2 217496492 217496797 -33191057 - AluSq SINE Alu -13 300 1 205 306 14 14 chr2 217497355 217497427 -33190427 - MIR3 SINE MIR -10 198 127 193 175 25 0 chr2 217497706 217497746 -33190108 - L2 LINE L2 -9 3304 3264 225 0 0 0 chr2 217498193 217498218 -33189636 + (TG)n Simple_repeat Simple_repeat 1 25 0 2122 112 14 3 chr2 217498963 217499259 -33188595 + AluSx SINE Alu 1 299 -13 277 373 12 84 chr2 217501715 217502061 -33185793 - L2 LINE L2 -86 3186 2866 295 292 108 31 chr2 217503018 217503148 -33184706 - MIR SINE MIR -117 145 6 331 273 68 38 chr2 217503490 217503622 -33184232 + L2 LINE L2 3178 3313 0 23 33 0 0 chr2 217503728 217503758 -33184096 + AT_rich Low_complexity Low_complexity 1 30 0 615 307 82 12 chr2 217503783 217504027 -33183827 - MIR SINE MIR 0 262 2 1089 299 113 11 chr2 217507278 217507713 -33180141 + LTR16C LTR ERVL 2 480 -11 1218 209 53 30 chr2 217508035 217508336 -33179518 - AluJo SINE Alu -4 308 1 279 0 0 0 chr2 217509392 217509476 -33178378 + L1PA2 LINE L1 6112 6195 0 992 131 45 0 chr2 217510413 217510589 -33177265 - L1MA4 LINE L1 -11 6289 6106 29 0 0 0 chr2 217510993 217511022 -33176832 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 217512275 217512299 -33175555 + AT_rich Low_complexity Low_complexity 1 24 0 337 206 14 0 chr2 217512779 217512852 -33175002 - MER53 DNA DNA -112 77 4 252 262 0 12 chr2 217513538 217513622 -33174232 + (TA)n Simple_repeat Simple_repeat 2 84 0 200 254 102 0 chr2 217514119 217514178 -33173676 + MIR SINE MIR 87 151 -57 453 371 72 0 chr2 217515703 217515870 -33171984 + MIR SINE MIR 20 198 -64 228 200 0 0 chr2 217516206 217516256 -33171598 + (CATA)n Simple_repeat Simple_repeat 1 50 0 293 22 0 43 chr2 217516473 217516519 -33171335 - L1PA14 LINE L1 0 6161 6118 * 3857 223 14 7 chr2 217516512 217517357 -33170497 + L1P LINE L1 1898 2748 -3398 21 36 0 0 chr2 217517374 217517402 -33170452 + AT_rich Low_complexity Low_complexity 1 28 0 359 261 97 51 chr2 217517479 217517655 -33170199 - L3 LINE CR1 -97 1480 1297 28 48 0 0 chr2 217519479 217519521 -33168333 + AT_rich Low_complexity Low_complexity 1 42 0 300 217 132 9 chr2 217521414 217521520 -33166334 + L2 LINE L2 3193 3311 -2 180 0 0 0 chr2 217522301 217522321 -33165533 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 280 403 48 31 chr2 217524035 217524454 -33163400 - L2 LINE L2 -939 2375 1950 246 300 174 18 chr2 217525974 217526158 -33161696 + MIR3 SINE MIR 1 205 -3 380 231 11 11 chr2 217527373 217527464 -33160390 + MIR3 SINE MIR 104 194 -14 434 284 111 19 chr2 217527716 217527878 -33159976 + MIR SINE MIR 4 180 -82 557 207 9 0 chr2 217529038 217529149 -33158705 + AluJb SINE Alu 183 294 -18 205 156 0 0 chr2 217531483 217531515 -33156339 + (TG)n Simple_repeat Simple_repeat 1 32 0 24 0 0 0 chr2 217531958 217531982 -33155872 + AT_rich Low_complexity Low_complexity 1 24 0 3073 62 0 0 chr2 217532661 217533049 -33154805 - L1PA7 LINE L1 -378 5776 5389 2988 55 0 10 chr2 217533049 217533434 -33154420 + L1PA7 LINE L1 5774 6154 0 22 80 0 0 chr2 217535247 217535297 -33152557 + AT_rich Low_complexity Low_complexity 1 50 0 1687 48 5 0 chr2 217538272 217538479 -33149375 + L1PA7 LINE L1 5947 6154 0 2470 155 14 23 chr2 217538832 217539264 -33148590 - MSTA LTR MaLR 0 428 1 600 293 130 0 chr2 217540237 217540445 -33147409 - MIR SINE MIR 0 262 28 352 282 17 22 chr2 217540601 217540782 -33147072 + (TA)n Simple_repeat Simple_repeat 1 180 0 203 298 0 0 chr2 217543470 217543527 -33144327 - L2 LINE L2 -1 3312 3256 221 281 0 0 chr2 217543582 217543639 -33144215 - L2 LINE L2 -1 3312 3256 200 316 107 48 chr2 217543797 217543984 -33143870 - MIR SINE MIR -45 217 20 229 317 64 1 chr2 217545275 217545402 -33142452 - MIR SINE MIR -62 146 32 195 204 0 0 chr2 217546206 217546250 -33141604 + CT-rich Low_complexity Low_complexity 6 49 0 1914 121 0 0 chr2 217546940 217547196 -33140658 + AluSg SINE Alu 38 293 -17 2612 30 0 3 chr2 217547697 217547998 -33139856 - AluY SINE Alu -11 300 1 2326 63 0 69 chr2 217548152 217548486 -33139368 + AluY SINE Alu 1 311 0 210 267 17 0 chr2 217551732 217551792 -33136062 + T-rich Low_complexity Low_complexity 5 65 0 2461 64 0 0 chr2 217552533 217552828 -33135026 + AluY SINE Alu 2 296 -15 2028 126 14 3 chr2 217553332 217553626 -33134228 - AluSg SINE Alu -13 297 1 859 209 24 29 chr2 217553809 217554019 -33133835 + MER3 DNA MER1_type 1 209 0 50 65 0 0 chr2 217554744 217554836 -33133018 + AT_rich Low_complexity Low_complexity 1 92 0 328 314 8 48 chr2 217554838 217554962 -33132892 - L2 LINE L2 -1 3312 3194 2926 3 0 0 chr2 217557714 217558028 -33129826 + AluYb8 SINE Alu 1 314 -4 386 294 114 9 chr2 217558495 217558679 -33129175 - MIR3 SINE MIR -55 207 5 953 203 60 115 chr2 217559257 217559515 -33128339 - MSTD LTR MaLR 0 396 168 1655 187 0 14 chr2 217559515 217559798 -33128056 - AluJb SINE Alu -22 290 12 953 203 60 115 chr2 217559798 217559958 -33127896 - MSTD LTR MaLR -228 168 1 244 254 0 0 chr2 217560379 217560434 -33127420 - MIR3 SINE MIR -9 199 145 203 194 0 0 chr2 217561051 217561087 -33126767 + A-rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr2 217561689 217561719 -33126135 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 217562393 217562414 -33125440 + AT_rich Low_complexity Low_complexity 1 21 0 1633 123 53 4 chr2 217563896 217564139 -33123715 + AluSx SINE Alu 1 255 -57 422 263 35 9 chr2 217564164 217564278 -33123576 + MIR SINE MIR 72 188 -74 22 56 0 0 chr2 217564695 217564731 -33123123 + AT_rich Low_complexity Low_complexity 1 36 0 606 140 26 0 chr2 217567891 217568005 -33119849 + L1MA7 LINE L1 6172 6288 -3 1000 321 102 34 chr2 217570211 217571402 -33116452 - L2 LINE L2 -18 3254 1962 231 287 21 21 chr2 217571446 217571540 -33116314 - L2 LINE L2 -213 3059 2966 645 298 108 36 chr2 217573285 217573590 -33114264 - L3 LINE CR1 -1 1576 1250 243 342 19 82 chr2 217573780 217573938 -33113916 - L3 LINE CR1 -423 1154 1007 326 285 55 61 chr2 217573949 217574114 -33113740 - MIR SINE MIR -19 243 80 310 364 28 21 chr2 217574268 217574411 -33113443 + MIR SINE MIR 5 148 -114 841 213 27 0 chr2 217575233 217575416 -33112438 - MER5A DNA MER1_type 0 189 2 2375 61 7 0 chr2 217575694 217575991 -33111863 - AluY SINE Alu -12 299 1 1571 202 15 96 chr2 217577521 217577991 -33109863 - MSTB1 LTR MaLR 0 432 1 203 353 59 67 chr2 217578229 217578484 -33109370 - L2 LINE L2 -195 3077 2825 21 82 0 0 chr2 217579775 217579824 -33108030 + AT_rich Low_complexity Low_complexity 1 49 0 2039 103 3 38 chr2 217580287 217580578 -33107276 - AluSx SINE Alu -10 302 22 1949 103 86 14 chr2 217582707 217582998 -33104856 - AluSp SINE Alu -1 312 1 10476 32 0 0 chr2 217583709 217585727 -33102127 - L1PA3 LINE L1 -1 6154 4137 288 77 0 0 chr2 217586450 217586489 -33101365 + (TG)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr2 217586539 217586561 -33101293 + AT_rich Low_complexity Low_complexity 1 22 0 1108 181 6 6 chr2 217590396 217590578 -33097276 - MER5A DNA MER1_type -6 183 2 273 298 116 17 chr2 217591036 217591217 -33096637 - L3b LINE CR1 -205 1378 1180 23 33 0 0 chr2 217592049 217592079 -33095775 + AT_rich Low_complexity Low_complexity 1 30 0 406 281 62 8 chr2 217592146 217592274 -33095580 - MIR SINE MIR -65 197 63 2357 78 16 13 chr2 217592577 217592886 -33094968 + AluSp SINE Alu 3 312 -1 24 53 0 0 chr2 217593846 217593884 -33093970 + AT_rich Low_complexity Low_complexity 1 38 0 831 132 31 0 chr2 217596969 217597098 -33090756 - AluSc SINE Alu 0 309 177 1789 74 0 4 chr2 217598118 217598347 -33089507 - AluSq SINE Alu -5 308 81 725 233 41 0 chr2 217598509 217598681 -33089173 - MIR SINE MIR -1 261 83 309 235 242 15 chr2 217598995 217599127 -33088727 - L1MC4 LINE L1 0 8042 7881 2432 63 0 7 chr2 217601455 217601757 -33086097 - AluY SINE Alu -11 300 1 207 303 15 30 chr2 217602333 217602399 -33085455 + L2 LINE L2 3201 3265 -48 554 328 94 29 chr2 217603150 217603585 -33084269 - L2 LINE L2 -213 3059 2599 214 122 49 0 chr2 217603586 217603627 -33084227 + GA-rich Low_complexity Low_complexity 2 44 0 824 279 50 8 chr2 217603893 217604133 -33083721 + MIR SINE MIR 13 262 0 232 209 0 0 chr2 217604146 217604189 -33083665 - L2 LINE L2 -988 2326 2284 330 273 207 7 chr2 217604772 217604922 -33082932 - MIR SINE MIR -2 260 81 2186 129 116 13 chr2 217605230 217605617 -33082237 - MSTA LTR MaLR -1 427 1 2024 269 63 4 chr2 217605809 217606319 -33081535 - MLT1H1 LTR MaLR 0 555 16 558 301 73 16 chr2 217606886 217607132 -33080722 + MIR SINE MIR 1 260 -2 380 235 0 0 chr2 217608516 217608584 -33079270 - L2 LINE L2 0 3313 3246 867 307 121 33 chr2 217609259 217609712 -33078142 - L2 LINE L2 0 3313 2821 385 366 46 82 chr2 217611029 217611584 -33076270 - L2 LINE L2 0 3272 2734 706 311 18 21 chr2 217611794 217612128 -33075726 - L1MC4a LINE L1 -1907 5901 5569 820 273 98 36 chr2 217612142 217612581 -33075273 - MLT1H LTR MaLR 0 549 84 956 286 80 40 chr2 217613113 217613589 -33074265 - LTR33 LTR ERVL 0 521 27 2891 228 83 41 chr2 217613774 217615008 -33072846 - L1ME3A LINE L1 -14 6156 4874 303 287 84 23 chr2 217615064 217615374 -33072480 - L1ME3A LINE L1 -1617 4529 4201 2628 187 68 25 chr2 217615818 217616534 -33071320 - L1MC3 LINE L1 -389 8207 7375 1669 174 19 49 chr2 217616558 217616925 -33070929 + MLT1B LTR MaLR 35 390 0 1028 210 48 16 chr2 217616925 217617173 -33070681 - L1MC3 LINE L1 -1954 6642 6387 811 219 31 22 chr2 217617162 217617386 -33070468 - L1MC3 LINE L1 -2274 4683 4458 * 1525 201 103 26 chr2 217617393 217617943 -33069911 - L1MC3 LINE L1 -4589 2368 1684 1148 306 88 19 chr2 217619030 217619497 -33068357 - LTR33 LTR ERVL -5 516 18 604 320 48 45 chr2 217619762 217620053 -33067801 - L2 LINE L2 -619 2695 2404 1412 321 99 29 chr2 217620814 217621816 -33066038 - L2 LINE L2 -927 2387 1316 1199 52 0 0 chr2 217622409 217622562 -33065292 - AluY SINE Alu -1 310 158 196 329 13 13 chr2 217622943 217623022 -33064832 - L2 LINE L2 -1435 1879 1801 247 361 112 24 chr2 217623985 217624347 -33063507 - L2 LINE L2 -2 3270 2835 247 263 59 17 chr2 217624413 217624531 -33063323 - MER103 DNA DNA -1 165 43 369 352 66 6 chr2 217674721 217674903 -33012951 - L2 LINE L2 -557 2757 2565 544 209 17 26 chr2 217675657 217675772 -33012082 + MER81 DNA DNA 1 114 0 184 208 113 0 chr2 217675786 217675839 -33012015 + L2 LINE L2 3240 3298 -15 1751 159 7 33 chr2 217675948 217676250 -33011604 - AluSx SINE Alu -18 294 1 399 300 33 8 chr2 217676256 217676376 -33011478 - MIR SINE MIR -120 142 20 1329 200 108 33 chr2 217677924 217678284 -33009570 - MSTD LTR MaLR -9 387 1 2343 159 104 92 chr2 217679855 217680503 -33007351 - L1MB8 LINE L1 -6 6172 5514 1624 179 3 42 chr2 217680503 217680815 -33007039 - AluJb SINE Alu -12 300 1 2343 159 104 92 chr2 217680815 217680839 -33007015 - L1MB8 LINE L1 -664 5514 5492 514 246 97 51 chr2 217680816 217681011 -33006843 - L1MC3 LINE L1 -5518 1341 1138 * 1062 181 77 39 chr2 217681004 217681314 -33006540 - L1MA8 LINE L1 -4 6287 5966 * 1346 228 9 19 chr2 217681311 217681636 -33006218 - L1MC3 LINE L1 -5715 1144 823 2179 285 85 13 chr2 217681640 217682275 -33005579 - L1MC3 LINE L1 -6169 690 10 2768 151 38 5 chr2 217682502 217682945 -33004909 - LTR32 LTR ERVL 0 471 14 1092 264 40 74 chr2 217682946 217683351 -33004503 - MLT1E LTR MaLR -84 509 119 513 215 37 0 chr2 217683354 217683461 -33004393 - MLT1E LTR MaLR -432 161 51 248 388 71 54 chr2 217684788 217685180 -33002674 + L2 LINE L2 2844 3242 -30 274 278 210 28 chr2 217685201 217685377 -33002477 + MIR SINE MIR 9 216 -46 303 273 190 0 chr2 217686027 217686148 -33001706 - MIR SINE MIR -35 227 84 471 295 69 29 chr2 217686215 217686388 -33001466 - MER5A DNA MER1_type -6 183 4 219 356 25 0 chr2 217687924 217688042 -32999812 + CT-rich Low_complexity Low_complexity 5 125 0 834 214 0 51 chr2 217688102 217688298 -32999556 - MER5A DNA MER1_type -2 187 2 187 231 0 58 chr2 217688828 217688880 -32998974 - L2 LINE L2 0 3313 3265 507 300 132 8 chr2 217689141 217689384 -32998470 + L2 LINE L2 1951 2223 -1091 424 111 28 0 chr2 217689529 217689601 -32998253 + L1PA16 LINE L1 6084 6157 -9 189 291 76 38 chr2 217689745 217689824 -32998030 + L2 LINE L2 3148 3229 -43 257 309 0 0 chr2 217690306 217690374 -32997480 - MLT1J LTR MaLR -200 311 244 2147 113 3 7 chr2 217692212 217692513 -32995341 - AluSc SINE Alu -9 300 1 275 348 17 8 chr2 217693539 217693657 -32994197 - MLT1K LTR MaLR -290 298 180 371 289 78 95 chr2 217693968 217694314 -32993540 + MLT1J LTR MaLR 2 341 -170 2506 207 57 10 chr2 217694929 217695509 -32992345 - L1MC3 LINE L1 0 7785 7179 266 313 0 0 chr2 217695510 217695590 -32992264 - MLT1F1 LTR MaLR -453 114 35 606 169 229 0 chr2 217695591 217695774 -32992080 - L1MC3 LINE L1 -689 7096 6872 1618 181 33 38 chr2 217695774 217696139 -32991715 + MLT1A2 LTR MaLR 1 363 -11 3179 200 13 47 chr2 217696182 217696927 -32990927 - L1MC3 LINE L1 -921 6864 6145 579 263 13 7 chr2 217697023 217697175 -32990679 - MER91B DNA MER1_type -1 189 37 592 260 33 11 chr2 217697639 217697820 -32990034 + Charlie8 DNA MER1_type 70 254 -2163 234 244 134 83 chr2 217698218 217698435 -32989419 - L3 LINE CR1 -771 806 579 250 376 67 0 chr2 217698435 217698584 -32989270 - L3 LINE CR1 -1185 392 234 35 41 0 0 chr2 217699339 217699388 -32988466 + AT_rich Low_complexity Low_complexity 1 49 0 261 0 0 0 chr2 217699422 217699451 -32988403 + (CA)n Simple_repeat Simple_repeat 2 30 0 * 273 29 0 0 chr2 217699450 217699484 -32988370 + (GA)n Simple_repeat Simple_repeat 2 35 0 22 56 0 0 chr2 217701080 217701116 -32986738 + AT_rich Low_complexity Low_complexity 1 36 0 1912 116 42 3 chr2 217701670 217701954 -32985900 + AluSg SINE Alu 1 295 -15 1123 228 75 19 chr2 217702503 217702823 -32985031 + MER46C DNA MER2_type 1 338 0 368 289 97 9 chr2 217703028 217703142 -32984712 - MIR SINE MIR -121 141 18 24 32 0 0 chr2 217703152 217703183 -32984671 + AT_rich Low_complexity Low_complexity 1 31 0 632 258 76 25 chr2 217703242 217703270 -32984584 - MIR SINE MIR -54 208 183 5057 83 10 24 chr2 217703270 217703968 -32983886 + LTR12 LTR ERV1 1 688 0 632 258 76 25 chr2 217703968 217704137 -32983717 - MIR SINE MIR -79 183 1 29 60 0 0 chr2 217704407 217704457 -32983397 + AT_rich Low_complexity Low_complexity 1 50 0 414 254 0 81 chr2 217704644 217704817 -32983037 - L1MC5 LINE L1 -52 7909 7751 1492 178 97 7 chr2 217705729 217705998 -32981856 - AluJo SINE Alu -18 294 2 21 0 0 0 chr2 217706135 217706156 -32981698 + AT_rich Low_complexity Low_complexity 1 21 0 1587 207 90 57 chr2 217706650 217707197 -32980657 - L1MC4 LINE L1 -1 8041 7477 1321 127 38 4 chr2 217707370 217707606 -32980248 + L1MA2 LINE L1 6061 6304 0 1659 224 62 4 chr2 217707645 217708100 -32979754 - L1MC4 LINE L1 -530 7512 7032 1149 158 31 0 chr2 217708126 217708322 -32979532 - L1MC1 LINE L1 -26 6307 6106 1627 186 44 6 chr2 217708345 217708663 -32979191 + LTR42 LTR ERVL 164 493 -2 894 188 21 42 chr2 217708665 217708904 -32978950 - L1M4 LINE L1 -2100 4544 4311 1031 192 62 79 chr2 217709041 217709160 -32978694 + MER2 DNA MER2_type 1 121 -224 2078 117 3 0 chr2 217709160 217709451 -32978403 - AluY SINE Alu -19 292 1 1031 192 62 79 chr2 217709451 217709622 -32978232 + MER2 DNA MER2_type 121 286 -59 1119 226 33 23 chr2 217709630 217709931 -32977923 - L1M4 LINE L1 -2292 4352 4049 531 337 58 50 chr2 217710006 217710469 -32977385 - HAL1b LINE L1 -697 651 185 1438 225 21 96 chr2 217710738 217711417 -32976437 - L1M4 LINE L1 -842 5304 4677 935 314 111 39 chr2 217711509 217712220 -32975634 - L1M4 LINE L1 -5773 769 8 1085 180 3 129 chr2 217712699 217712994 -32974860 - AluJo SINE Alu -46 266 9 408 189 158 47 chr2 217714609 217714736 -32973118 + Charlie8 DNA MER1_type 50 190 -2227 373 203 16 124 chr2 217715039 217715089 -32972765 - MLT1A2 LTR MaLR 0 489 435 4562 48 50 3 chr2 217715089 217715670 -32972184 + LTR14B LTR ERVK 1 608 0 373 203 16 124 chr2 217715670 217715744 -32972110 - MLT1A2 LTR MaLR -54 435 273 23 68 0 0 chr2 217715744 217715788 -32972066 + AT_rich Low_complexity Low_complexity 1 44 0 283 256 12 49 chr2 217716572 217716654 -32971200 - L2 LINE L2 -4 3309 3231 * 295 304 81 20 chr2 217716642 217716790 -32971064 + MIR SINE MIR 13 169 -93 2233 236 22 26 chr2 217716822 217717368 -32970486 - ERVL LTR ERVL -3975 1789 1246 1237 229 23 30 chr2 217717380 217717681 -32970173 - MLT2D LTR ERVL -115 299 1 422 306 129 53 chr2 217717750 217718090 -32969764 + MLT1K LTR MaLR 78 443 -145 840 203 11 5 chr2 217718308 217718495 -32969359 + MER97b DNA MER1_type? 60 247 -806 823 241 99 0 chr2 217718619 217718831 -32969023 - MER97c DNA MER1_type? -466 624 392 396 277 27 0 chr2 217718891 217719003 -32968851 + MER97b DNA MER1_type? 938 1052 -1 466 46 46 0 chr2 217719221 217719286 -32968568 + MER41A LTR ERV1 399 466 -88 277 47 0 70 chr2 217719843 217719886 -32967968 + MADE1 DNA Mariner 2 41 -39 386 319 51 79 chr2 217720991 217721606 -32966248 + L2 LINE L2 2639 3313 0 24 0 0 0 chr2 217721688 217721712 -32966142 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 217723844 217723865 -32963989 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 217724126 217724150 -32963704 + AT_rich Low_complexity Low_complexity 1 24 0 381 347 121 5 chr2 217726336 217726526 -32961328 + MIR SINE MIR 37 248 -14 1674 194 106 3 chr2 217726646 217727032 -32960822 - MSTB LTR MaLR 0 426 1 1565 138 77 30 chr2 217727037 217727335 -32960519 - MSTA-int LTR MaLR -6 1645 1334 24 32 0 0 chr2 217727325 217727356 -32960498 + AT_rich Low_complexity Low_complexity 1 31 0 * 7472 37 2 0 chr2 217727356 217728941 -32958913 - L1PA3 LINE L1 -3 6152 4567 15306 27 9 0 chr2 217728941 217730791 -32957063 + L1PA3 LINE L1 2681 4547 -1599 7866 175 12 3 chr2 217730789 217732123 -32955731 - MSTA-int LTR MaLR -305 1346 1 * 1993 181 58 15 chr2 217732123 217732533 -32955321 - MSTA LTR MaLR 0 428 1 1882 190 38 43 chr2 217732539 217732982 -32954872 - MER31B LTR ERV1 -25 441 1 671 239 34 34 chr2 217733027 217733203 -32954651 - MER45A DNA AcHobo 0 178 3 356 159 87 0 chr2 217733621 217733690 -32954164 - MLT1J2 LTR MaLR 0 450 376 267 143 24 0 chr2 217734117 217734159 -32953695 - MLT1K LTR MaLR -358 230 188 194 299 0 15 chr2 217734276 217734343 -32953511 - L2 LINE L2 -822 2492 2427 300 359 187 27 chr2 217734373 217734780 -32953074 - L2 LINE L2 -2578 736 265 181 362 64 11 chr2 217735796 217735890 -32951964 + MIR SINE MIR 17 115 -93 257 280 43 11 chr2 217735940 217736033 -32951821 + MIR3 SINE MIR 99 194 -14 198 71 0 0 chr2 217738778 217738806 -32949048 + (CAT)n Simple_repeat Simple_repeat 3 30 0 9528 104 6 2 chr2 217739068 217741265 -32946589 + L1PA8 LINE L1 3947 6152 -20 29 28 0 0 chr2 217741365 217741401 -32946453 + AT_rich Low_complexity Low_complexity 1 36 0 336 282 32 32 chr2 217741634 217741758 -32946096 + L2 LINE L2 3173 3296 -17 2094 93 61 0 chr2 217741908 217742188 -32945666 - AluSx SINE Alu -15 297 1 991 207 59 101 chr2 217742303 217742397 -32945457 + MER2 DNA MER2_type 2 98 -247 2844 48 0 0 chr2 217742397 217742748 -32945106 + L1PA4 LINE L1 5805 6155 0 991 207 59 101 chr2 217742748 217743011 -32944843 + MER2 DNA MER2_type 98 344 -1 298 162 27 14 chr2 217743036 217743110 -32944744 + (TATG)n Simple_repeat Simple_repeat 4 78 0 1420 100 43 2 chr2 217743550 217743895 -32943959 + MSTA LTR MaLR 1 426 -2 551 213 37 35 chr2 217744509 217744874 -32942980 - MSTC LTR MaLR 0 457 3 371 298 41 33 chr2 217745996 217746117 -32941737 + L2 LINE L2 3151 3272 0 315 343 102 19 chr2 217746319 217746535 -32941319 + MIR SINE MIR 15 248 -14 1635 292 113 9 chr2 217747390 217747959 -32939895 - MLT2E LTR ERVL 0 628 1 561 335 95 28 chr2 217748176 217748715 -32939139 - L2 LINE L2 -685 2629 1968 213 121 0 0 chr2 217750958 217750991 -32936863 + (TGAG)n Simple_repeat Simple_repeat 3 35 0 3026 181 133 74 chr2 217751014 217751879 -32935975 - MER21A LTR ERV1 -4 927 12 289 170 38 0 chr2 217751916 217751969 -32935885 - MER21A LTR ERV1 -857 74 20 405 0 0 0 chr2 217751970 217752015 -32935839 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 277 155 24 95 chr2 217752869 217752953 -32934901 - L2 LINE L2 0 3313 3236 189 0 0 0 chr2 217753753 217753774 -32934080 + (T)n Simple_repeat Simple_repeat 1 21 0 22 0 0 0 chr2 217754620 217754642 -32933212 + AT_rich Low_complexity Low_complexity 1 22 0 30 83 0 0 chr2 217754673 217754745 -32933109 + AT_rich Low_complexity Low_complexity 1 72 0 511 249 94 15 chr2 217754919 217755120 -32932734 - L1ME3A LINE L1 -219 5951 5735 237 213 33 16 chr2 217755121 217755182 -32932672 + CT-rich Low_complexity Low_complexity 2 63 0 422 321 47 59 chr2 217755224 217755610 -32932244 - L1ME3A LINE L1 -538 5626 5262 2130 82 0 0 chr2 217755744 217756013 -32931841 - AluY SINE Alu -6 305 37 2180 109 3 0 chr2 217756118 217756436 -32931418 + AluSp SINE Alu 1 319 0 222 343 0 0 chr2 217756476 217756546 -32931308 + (TATATG)n Simple_repeat Simple_repeat 6 75 0 423 206 72 17 chr2 217757201 217757381 -32930473 - MER20B DNA MER1_type -11 772 583 518 303 179 14 chr2 217758017 217758364 -32929490 - MER20B DNA MER1_type -379 404 1 1491 231 122 15 chr2 217758892 217759498 -32928356 - MER69 DNA AcHobo -13 2513 1843 387 89 89 30 chr2 217759904 217760073 -32927781 + (TA)n Simple_repeat Simple_repeat 2 180 0 735 291 114 21 chr2 217760087 217760376 -32927478 - MER69 DNA AcHobo -2208 318 3 308 304 40 34 chr2 217761040 217761188 -32926666 + MIR SINE MIR 64 212 -50 306 321 83 9 chr2 217761528 217761637 -32926217 - L2 LINE L2 -8 3305 3189 211 342 53 26 chr2 217762054 217762168 -32925686 - L2 LINE L2 0 3313 3197 323 297 55 0 chr2 217764544 217764635 -32923219 - L2 LINE L2 -4 3309 3214 412 266 16 117 chr2 217764691 217764779 -32923075 - MIR SINE MIR -91 171 110 2450 40 17 13 chr2 217764779 217765080 -32922774 - AluY SINE Alu -9 302 1 412 266 16 117 chr2 217765080 217765179 -32922675 - MIR SINE MIR -152 110 3 24 32 0 0 chr2 217765211 217765242 -32922612 + AT_rich Low_complexity Low_complexity 1 31 0 402 288 129 0 chr2 217766398 217766537 -32921317 - MIR SINE MIR -26 236 80 621 227 16 0 chr2 217766766 217766894 -32920960 + MIR SINE MIR 82 211 -51 292 349 155 32 chr2 217767354 217768114 -32919740 + L2 LINE L2 1885 2738 -576 207 100 0 0 chr2 217769653 217769683 -32918171 + (T)n Simple_repeat Simple_repeat 1 30 0 222 272 160 41 chr2 217770342 217770473 -32917381 - MER5A DNA MER1_type 0 189 32 3532 117 0 16 chr2 217770473 217771020 -32916834 - L1PA15 LINE L1 -3 6162 5625 222 272 160 41 chr2 217771020 217771057 -32916797 - MER5A DNA MER1_type -157 32 1 275 280 43 0 chr2 217771768 217771861 -32915993 - MLT1J1 LTR MaLR -284 162 66 180 0 0 0 chr2 217772652 217772672 -32915182 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 376 343 96 6 chr2 217772958 217773136 -32914718 + MIR SINE MIR 20 213 -49 746 298 33 75 chr2 217773655 217774162 -32913692 - L2 LINE L2 0 3313 2784 365 296 87 39 chr2 217774522 217774728 -32913126 - L3b LINE CR1 -224 1359 1144 23 0 0 0 chr2 217774741 217774764 -32913090 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr2 217776159 217776182 -32911672 + (A)n Simple_repeat Simple_repeat 1 23 0 3226 237 103 84 chr2 217776774 217778062 -32909792 - L1MCa LINE L1 -2924 3502 2240 1224 79 44 39 chr2 217778062 217778265 -32909589 - L1MA3 LINE L1 -1 6304 6101 3226 237 103 84 chr2 217778265 217778890 -32908964 - L1MCa LINE L1 -4186 2240 1628 198 33 33 0 chr2 217778890 217778920 -32908934 + (TTTA)n Simple_repeat Simple_repeat 2 176 0 2111 110 0 0 chr2 217778920 217779203 -32908651 - AluSq SINE Alu -1 312 1 3226 237 103 84 chr2 217779203 217780687 -32907167 - L1MCa LINE L1 -4797 1629 19 202 234 0 0 chr2 217781241 217781288 -32906566 + T-rich Low_complexity Low_complexity 1 47 0 201 200 0 22 chr2 217782691 217782736 -32905118 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 21 36 0 0 chr2 217783070 217783098 -32904756 + AT_rich Low_complexity Low_complexity 1 28 0 378 290 148 22 chr2 217783104 217783287 -32904567 + MIR SINE MIR 56 261 -1 1996 117 30 30 chr2 217784259 217784559 -32903295 - AluSx SINE Alu -12 300 1 193 283 0 19 chr2 217784801 217784854 -32903000 - MIR SINE MIR -61 147 96 24 0 0 0 chr2 217785153 217785177 -32902677 + AT_rich Low_complexity Low_complexity 1 24 0 240 132 0 0 chr2 217785624 217785662 -32902192 - MLT2D LTR ERVL 0 414 377 282 294 18 0 chr2 217785677 217785786 -32902068 + (TA)n Simple_repeat Simple_repeat 2 112 0 1607 170 114 6 chr2 217785806 217786130 -32901724 - MLT2D LTR ERVL -55 359 1 912 295 45 35 chr2 217786860 217787257 -32900597 - MLT1I LTR MaLR -3 406 6 325 359 114 4 chr2 217787285 217787530 -32900324 - MLT1L LTR MaLR 0 615 344 338 326 83 15 chr2 217788263 217788395 -32899459 + MIR SINE MIR 12 152 -110 324 259 40 12 chr2 217788407 217788559 -32899295 - MLT1J1 LTR MaLR 0 446 240 5521 108 14 1 chr2 217788754 217789591 -32898263 + L1PA8 LINE L1 4335 5182 -964 4775 72 18 2 chr2 217789589 217790215 -32897639 + L1PA8 LINE L1 5461 6096 -76 * 21 0 0 0 chr2 217790283 217790304 -32897550 + AT_rich Low_complexity Low_complexity 1 21 0 314 283 3 14 chr2 217790413 217790498 -32897356 + MIR SINE MIR 76 160 -48 3284 82 13 2 chr2 217790535 217790984 -32896870 + L1PA10 LINE L1 5712 6165 -3 21 36 0 0 chr2 217791886 217791914 -32895940 + AT_rich Low_complexity Low_complexity 1 28 0 2233 267 87 9 chr2 217794401 217795185 -32892669 - L1ME3A LINE L1 -14 6156 5312 12098 214 56 32 chr2 217795256 217796131 -32891723 - L1PB3 LINE L1 0 7216 6363 585 116 21 11 chr2 217796131 217796250 -32891604 - AluSc SINE Alu 0 304 185 12098 214 56 32 chr2 217796250 217800068 -32887786 - L1PB3 LINE L1 -853 6363 2638 2080 104 0 39 chr2 217800068 217800376 -32887478 + AluY SINE Alu 1 296 -15 12098 214 56 32 chr2 217800376 217800980 -32886874 - L1PB3 LINE L1 -4578 2638 1696 1994 200 62 0 chr2 217800980 217801380 -32886474 - MSTB LTR MaLR 0 426 2 12098 214 56 32 chr2 217801380 217801560 -32886294 - L1PB3 LINE L1 -5520 1696 1522 343 254 86 41 chr2 217801583 217801827 -32886027 - L1ME3A LINE L1 -1572 4574 4320 2479 268 66 13 chr2 217801833 217802795 -32885059 - L1PB3 LINE L1 -5219 1990 1081 207 0 0 0 chr2 217802795 217802818 -32885036 + (TG)n Simple_repeat Simple_repeat 2 24 0 2479 268 66 13 chr2 217802818 217802926 -32884928 - L1PB3 LINE L1 -6128 1081 19 674 319 45 24 chr2 217803098 217803433 -32884421 - L1PA15-16 LINE L1 -6507 342 1 557 315 97 14 chr2 217803487 217804001 -32883853 - L1M4 LINE L1 -916 5816 5260 229 228 35 61 chr2 217804085 217804199 -32883655 - L1M4 LINE L1 -4789 1864 1754 28 48 0 0 chr2 217807039 217807081 -32880773 + AT_rich Low_complexity Low_complexity 1 42 0 4350 170 26 14 chr2 217807395 217808155 -32879699 + Tigger7 DNA MER2_type 2 770 -1717 1609 156 20 96 chr2 217808155 217808553 -32879301 + Tigger7 DNA MER2_type 2218 2585 -2 280 378 52 0 chr2 217809474 217809609 -32878245 - MIR SINE MIR -92 170 29 218 337 11 11 chr2 217809823 217809918 -32877936 + MIR SINE MIR 112 206 -56 428 283 0 9 chr2 217810263 217810369 -32877485 + MER5A DNA MER1_type 9 113 -76 374 333 122 63 chr2 217810674 217811309 -32876545 - L2 LINE L2 0 3313 2636 554 224 33 26 chr2 217811617 217811769 -32876085 + LTR33A LTR ERVL 371 523 0 651 299 126 28 chr2 217811822 217812140 -32875714 - L2 LINE L2 -912 2402 2054 1149 150 16 0 chr2 217812363 217812556 -32875298 - L1PA16 LINE L1 -17 6149 5954 323 327 67 13 chr2 217812595 217812745 -32875109 + MER91A DNA MER1_type 1 158 -38 2413 92 0 0 chr2 217812930 217813236 -32874618 - AluSp SINE Alu -7 306 1 272 389 91 17 chr2 217813241 217813416 -32874438 + MER5A DNA MER1_type 2 189 0 243 275 44 11 chr2 217815140 217815231 -32872623 - L1ME4a LINE L1 -50 6071 5978 191 146 24 0 chr2 217815263 217815304 -32872550 + (TATG)n Simple_repeat Simple_repeat 2 43 0 367 276 73 16 chr2 217815374 217815497 -32872357 - L2 LINE L2 -8 3305 3176 1129 186 7 71 chr2 217815977 217816272 -32871582 - L1MA4 LINE L1 -1 6299 6024 268 298 136 16 chr2 217817608 217817917 -32869937 - L1ME4a LINE L1 -165 5956 5611 204 67 0 0 chr2 217870271 217870301 -32817553 + (CA)n Simple_repeat Simple_repeat 1 30 0 359 312 152 38 chr2 217870301 217870644 -32817210 + L1ME2 LINE L1 96 477 -5593 334 292 64 50 chr2 217870939 217871158 -32816696 + L1ME2 LINE L1 707 928 -5142 * 392 293 69 9 chr2 217871135 217871251 -32816603 + L1ME2 LINE L1 2328 2450 -3630 797 230 37 37 chr2 217871384 217871684 -32816170 + L1ME2 LINE L1 2606 2905 -3175 863 249 76 42 chr2 217871727 217871807 -32816047 + L1ME2 LINE L1 4392 4468 -1612 2069 111 27 10 chr2 217871807 217872105 -32815749 + AluSx SINE Alu 1 303 -9 863 249 76 42 chr2 217872105 217872378 -32815476 + L1ME2 LINE L1 4468 4757 -1323 10719 44 6 80 chr2 217872390 217873919 -32813935 + SVA Other Other 1 1418 0 1543 260 53 20 chr2 217873919 217873995 -32813859 + L1ME2 LINE L1 5543 5615 -483 1577 139 57 92 chr2 217873995 217874384 -32813470 - THE1C LTR MaLR 0 375 1 1543 260 53 20 chr2 217874384 217874814 -32813040 + L1ME2 LINE L1 5615 6066 -32 732 343 88 33 chr2 217875162 217875527 -32812327 + LTR16C LTR ERVL 49 433 -58 21 36 0 0 chr2 217876410 217876438 -32811416 + AT_rich Low_complexity Low_complexity 1 28 0 318 279 76 76 chr2 217881474 217881632 -32806222 + MLT1J2 LTR MaLR 265 422 -28 251 364 18 9 chr2 217881730 217881840 -32806014 - MIR SINE MIR -71 137 27 2165 108 0 0 chr2 217882359 217882654 -32805200 - AluSq SINE Alu -18 295 1 25 51 0 0 chr2 217883342 217883381 -32804473 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 217883404 217883426 -32804428 + AT_rich Low_complexity Low_complexity 1 22 0 214 172 17 35 chr2 217883791 217883849 -32804005 + CT-rich Low_complexity Low_complexity 1 57 0 563 299 143 30 chr2 217884812 217885378 -32802476 - L1ME3 LINE L1 -236 5926 5297 724 282 167 29 chr2 217885399 217886165 -32801689 - L1ME3 LINE L1 -897 5249 4378 210 333 121 30 chr2 217888188 217888353 -32799501 - MIR SINE MIR -66 196 17 249 108 0 0 chr2 217888409 217888446 -32799408 + (TA)n Simple_repeat Simple_repeat 1 37 0 216 0 0 0 chr2 217888457 217888481 -32799373 + (TG)n Simple_repeat Simple_repeat 2 25 0 756 300 171 19 chr2 217889286 217889876 -32797978 - L2 LINE L2 -10 3303 2632 354 286 149 6 chr2 217891494 217891655 -32796199 + L2 LINE L2 3124 3307 -6 2085 129 3 0 chr2 217891771 217892082 -32795772 - AluSx SINE Alu 0 312 1 444 304 62 48 chr2 217892162 217892498 -32795356 + LTR16C LTR ERVL 151 491 0 25 0 0 0 chr2 217893121 217893146 -32794708 + AT_rich Low_complexity Low_complexity 1 25 0 269 194 21 97 chr2 217893199 217893292 -32794562 + MIR SINE MIR 173 258 -4 965 171 14 192 chr2 217893300 217893732 -32794122 + LTR49-int LTR ERV1 5813 6167 -164 1082 257 104 25 chr2 217893876 217894281 -32793573 + MER39 LTR ERV1 261 697 -10 29 0 0 0 chr2 217894969 217894998 -32792856 + AT_rich Low_complexity Low_complexity 1 29 0 398 267 161 0 chr2 217895080 217895297 -32792557 + L1ME4a LINE L1 5868 6119 -2 2721 153 30 2 chr2 217895310 217895806 -32792048 - L1MA8 LINE L1 -6 6285 5776 560 246 36 0 chr2 217895849 217895987 -32791867 + L1M2 LINE L1 5638 5780 -511 7604 29 3 0 chr2 217896342 217897376 -32790478 - L1PA4 LINE L1 0 6155 5121 24 32 0 0 chr2 217898139 217898170 -32789684 + AT_rich Low_complexity Low_complexity 1 31 0 735 272 143 8 chr2 217898662 217899187 -32788667 - L2 LINE L2 0 3313 2681 482 312 117 45 chr2 217899310 217899906 -32787948 - L1M4 LINE L1 -1438 4777 4139 2133 106 0 3 chr2 217900157 217900492 -32787362 - AluY SINE Alu 0 334 1 22 0 0 0 chr2 217900741 217900763 -32787091 + AT_rich Low_complexity Low_complexity 1 22 0 32239 113 20 29 chr2 217901059 217905486 -32782368 - L1PA7 LINE L1 0 6154 1801 14226 28 0 1 chr2 217905486 217907941 -32779913 - L1PA4 LINE L1 -4 6151 3698 32239 113 20 29 chr2 217907941 217909714 -32778140 - L1PA7 LINE L1 -4353 1801 13 466 284 103 7 chr2 217910001 217910156 -32777698 - MER5B DNA MER1_type -6 172 3 316 301 39 51 chr2 217910538 217910694 -32777160 - L2 LINE L2 -10 3303 3150 * 411 335 57 6 chr2 217910638 217910796 -32777058 + L2 LINE L2 1150 1315 -1999 2287 154 65 7 chr2 217910796 217911199 -32776655 + MSTA LTR MaLR 1 426 -2 4573 151 41 4 chr2 217911208 217911992 -32775862 + MSTA-int LTR MaLR 1 813 -838 1718 162 0 18 chr2 217912194 217912478 -32775376 - AluSx SINE Alu -33 279 1 2412 58 10 3 chr2 217912533 217912841 -32775013 + AluY SINE Alu 1 310 -1 327 219 62 62 chr2 217913309 217913405 -32774449 + MLT1J LTR MaLR 94 189 -322 23 0 0 0 chr2 217913638 217913661 -32774193 + AT_rich Low_complexity Low_complexity 1 23 0 31 58 0 0 chr2 217914064 217914116 -32773738 + AT_rich Low_complexity Low_complexity 1 52 0 515 308 131 14 chr2 217914281 217914502 -32773352 + MIR SINE MIR 2 248 -14 272 262 12 0 chr2 217915287 217915371 -32772483 - L1MEc LINE L1 -2828 3387 3303 * 352 305 0 23 chr2 217915368 217915499 -32772355 - L1MEc LINE L1 -3908 2488 2361 1748 261 44 19 chr2 217915509 217916150 -32771704 - L1MEc LINE L1 -2935 3280 2624 4356 269 76 32 chr2 217916226 217918334 -32769520 - L1MEc LINE L1 -3608 2607 393 1587 122 4 4 chr2 217918334 217918588 -32769266 + L1MA4A LINE L1 6045 6298 -5 4356 269 76 32 chr2 217918588 217918942 -32768912 - L1MEc LINE L1 -5822 393 56 23 0 0 0 chr2 217919343 217919366 -32768488 + AT_rich Low_complexity Low_complexity 1 23 0 5569 182 37 8 chr2 217921102 217922486 -32765368 - L1MC1 LINE L1 -5 6328 4901 225 380 151 23 chr2 217922770 217923368 -32764486 + L2 LINE L2 2070 2743 -571 42 57 0 0 chr2 217923968 217924038 -32763816 + AT_rich Low_complexity Low_complexity 1 70 0 1436 273 29 35 chr2 217924211 217924831 -32763023 + L1M4 LINE L1 2215 2830 -3316 212 75 0 25 chr2 217924879 217924919 -32762935 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1565 32 0 0 chr2 217924967 217925156 -32762698 - L1PA2 LINE L1 0 6155 5967 4866 16 9 0 chr2 217925156 217925724 -32762130 + L1PA2 LINE L1 5400 5972 -183 682 220 31 85 chr2 217925735 217926036 -32761818 + L1M4 LINE L1 2850 3123 -3023 797 145 24 6 chr2 217926036 217926202 -32761652 + L1MA7 LINE L1 6119 6287 -4 682 220 31 85 chr2 217926202 217926323 -32761531 + L1M4 LINE L1 3123 3249 -2897 489 294 111 6 chr2 217926324 217926504 -32761350 + LTR16A1 LTR ERVL 1 199 -258 395 266 6 10 chr2 217926608 217926721 -32761133 - L1MA10 LINE L1 -62 6263 5989 840 268 102 37 chr2 217927985 217928418 -32759436 + MLT1C LTR MaLR 7 467 0 4103 199 3 50 chr2 217928419 217929336 -32758518 + MLT1C-int LTR MaLR 2 875 -496 295 280 98 42 chr2 217929609 217930059 -32757795 + L1MEd LINE L1 841 1302 -4827 21 0 0 0 chr2 217930317 217930338 -32757516 + AT_rich Low_complexity Low_complexity 1 21 0 841 305 14 0 chr2 217930405 217930628 -32757226 - MIR SINE MIR -25 237 12 288 294 0 0 chr2 217930696 217930764 -32757090 - L2 LINE L2 -3 3310 3243 715 286 112 27 chr2 217930851 217931487 -32756367 + L1MEd LINE L1 2549 3238 -2891 651 282 123 72 chr2 217931490 217931922 -32755932 - L2 LINE L2 -381 2933 2480 233 217 0 65 chr2 217932498 217932590 -32755264 + MLT1J2 LTR MaLR 365 450 0 242 325 0 0 chr2 217933365 217933442 -32754412 + GA-rich Low_complexity Low_complexity 2 78 0 1674 226 38 96 chr2 217933550 217934152 -32753702 + MLT1E2 LTR MaLR 60 626 0 1899 166 13 42 chr2 217934604 217934990 -32752864 + THE1C LTR MaLR 1 375 0 23 33 0 0 chr2 217938013 217938043 -32749811 + AT_rich Low_complexity Low_complexity 1 30 0 812 188 29 13 chr2 217938218 217938517 -32749337 + MLT1A1 LTR MaLR 1 365 0 302 234 26 0 chr2 217939100 217939177 -32748677 + CT-rich Low_complexity Low_complexity 2 80 0 436 320 69 30 chr2 217939419 217939846 -32748008 - LTR16A1 LTR ERVL 0 457 1 5348 124 26 8 chr2 217940012 217941403 -32746451 - L1PA13 LINE L1 -5 6158 4733 13184 147 26 14 chr2 217941422 217941762 -32746092 - L1PB1 LINE L1 -1 6866 6531 288 0 0 0 chr2 217941762 217941794 -32746060 + (TG)n Simple_repeat Simple_repeat 2 33 0 13184 147 26 14 chr2 217941794 217943656 -32744198 - L1PB1 LINE L1 -336 6531 4692 2109 111 0 0 chr2 217943656 217943963 -32743891 - AluSc SINE Alu 0 307 1 13184 147 26 14 chr2 217943963 217944150 -32743704 - L1PB1 LINE L1 -2175 4692 4509 274 73 18 18 chr2 217944150 217944205 -32743649 + (TTG)n Simple_repeat Simple_repeat 3 57 0 13184 147 26 14 chr2 217944205 217947092 -32740762 - L1PB1 LINE L1 -2358 4509 1124 6469 119 20 30 chr2 217947092 217948171 -32739683 - MER11C LTR ERVK 0 1071 3 13184 147 26 14 chr2 217948171 217949309 -32738545 - L1PB1 LINE L1 -5743 1124 1 1230 166 73 36 chr2 217949636 217949883 -32737971 + AluJb SINE Alu 12 267 -45 23 54 0 0 chr2 217949961 217949998 -32737856 + AT_rich Low_complexity Low_complexity 1 37 0 3727 153 20 6 chr2 217950273 217950921 -32736933 - L1MC1 LINE L1 -18 6315 5659 2072 111 0 10 chr2 217950986 217951275 -32736579 + AluSg SINE Alu 11 296 -14 566 248 47 0 chr2 217951295 217951424 -32736430 + L1MC4 LINE L1 7337 7471 -571 836 228 65 122 chr2 217951430 217951965 -32735889 + L1MC4 LINE L1 7538 8042 0 305 336 63 57 chr2 217953466 217953942 -32733912 + L2 LINE L2 2352 2830 -484 21 0 0 0 chr2 217953947 217953968 -32733886 + AT_rich Low_complexity Low_complexity 1 21 0 527 279 185 18 chr2 217954576 217954917 -32732937 + MLT1I LTR MaLR 3 400 -9 213 368 98 0 chr2 217958082 217958215 -32729639 - L2 LINE L2 -302 2970 2825 1850 134 20 36 chr2 217958355 217958661 -32729193 + AluSq SINE Alu 1 301 -12 538 268 26 88 chr2 217960149 217960377 -32727477 - MIR SINE MIR -4 258 45 1004 79 7 0 chr2 217960840 217960980 -32726874 + L1PA6 LINE L1 4769 4909 -1237 6986 52 7 3 chr2 217960982 217962082 -32725772 + L1PA6 LINE L1 5044 6147 -7 24 32 0 0 chr2 217962261 217962292 -32725562 + AT_rich Low_complexity Low_complexity 1 31 0 372 265 79 95 chr2 217962714 217963197 -32724657 + L1ME LINE L1 5318 5792 -329 674 270 137 70 chr2 217963257 217963493 -32724361 - MLT1J LTR MaLR -64 447 228 1256 107 58 36 chr2 217963493 217963718 -32724136 - MER30 DNA MER1_type 0 230 1 674 270 137 70 chr2 217963718 217963896 -32723958 - MLT1J LTR MaLR -283 228 5 420 320 47 0 chr2 217964000 217964150 -32723704 + MIR SINE MIR 105 261 -1 224 342 25 0 chr2 217964649 217964769 -32723085 + MIR SINE MIR 79 201 -61 378 42 0 0 chr2 217965697 217965745 -32722109 + (CA)n Simple_repeat Simple_repeat 1 48 0 21 57 0 0 chr2 217966063 217966098 -32721756 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr2 217967223 217967254 -32720600 + AT_rich Low_complexity Low_complexity 1 31 0 320 123 0 46 chr2 217967256 217967321 -32720533 + (T)n Simple_repeat Simple_repeat 1 62 0 302 167 0 15 chr2 217968187 217968253 -32719601 + (TA)n Simple_repeat Simple_repeat 1 65 0 270 0 0 0 chr2 217969358 217969388 -32718466 + (CA)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr2 217969483 217969505 -32718349 + AT_rich Low_complexity Low_complexity 1 22 0 441 296 44 0 chr2 217971203 217971338 -32716516 + MLT1G3 LTR MaLR 156 296 -234 1175 198 209 129 chr2 217971346 217972053 -32715801 - LTR41 LTR ERVL -9 764 1 270 195 65 13 chr2 217972182 217972259 -32715595 + MLT1G1 LTR MaLR 515 595 0 201 312 32 11 chr2 217973174 217973267 -32714587 + L2 LINE L2 1426 1520 -1794 482 167 19 6 chr2 217973579 217973741 -32714113 + (TA)n Simple_repeat Simple_repeat 1 164 0 353 96 66 30 chr2 217973833 217973999 -32713855 + (TA)n Simple_repeat Simple_repeat 1 172 0 399 114 57 34 chr2 217974110 217974286 -32713568 + (TA)n Simple_repeat Simple_repeat 1 180 0 341 213 6 0 chr2 217974420 217974594 -32713260 + (TA)n Simple_repeat Simple_repeat 2 176 0 410 194 14 32 chr2 217974615 217974901 -32712953 + (TA)n Simple_repeat Simple_repeat 1 280 0 1537 335 85 43 chr2 217974901 217976022 -32711832 + L2 LINE L2 1809 2976 -338 27 0 0 0 chr2 217977097 217977124 -32710730 + AT_rich Low_complexity Low_complexity 1 27 0 607 275 94 71 chr2 217977819 217978212 -32709642 - MLT1I LTR MaLR -1 408 7 610 272 110 11 chr2 217978657 217978848 -32709006 + MER63A DNA MER1_type 1 210 0 200 189 0 0 chr2 217978925 217978962 -32708892 + (CA)n Simple_repeat Simple_repeat 1 37 0 22 70 0 0 chr2 217980665 217980708 -32707146 + AT_rich Low_complexity Low_complexity 1 43 0 295 67 27 40 chr2 217980979 217981054 -32706800 + (TA)n Simple_repeat Simple_repeat 2 75 0 1188 103 0 0 chr2 217981246 217981420 -32706434 + (TA)n Simple_repeat Simple_repeat 1 174 0 290 270 17 61 chr2 217982393 217982508 -32705346 + L2 LINE L2 3190 3299 -14 420 314 26 19 chr2 217982662 217982871 -32704983 + MER20B DNA MER1_type 2 218 -1 492 332 80 89 chr2 217983153 217984231 -32703623 - L3 LINE CR1 -295 1282 215 421 313 43 6 chr2 217984657 217984820 -32703034 + MIR SINE MIR 65 233 -29 214 286 52 13 chr2 217988223 217988300 -32699554 - MIR SINE MIR -91 117 38 190 56 56 0 chr2 217988686 217988722 -32699132 + T-rich Low_complexity Low_complexity 5 42 0 2093 122 3 6 chr2 217988979 217989291 -32698563 - AluSq SINE Alu -2 311 1 491 84 145 0 chr2 217989483 217989566 -32698288 + AluJb SINE Alu 203 297 -15 311 219 37 12 chr2 217989741 217989823 -32698031 + L2 LINE L2 3229 3312 -1 1366 187 8 0 chr2 217990157 217990403 -32697451 + AluSx SINE Alu 64 311 -1 2062 121 0 0 chr2 217992156 217992466 -32695388 + AluSc SINE Alu 1 310 0 183 273 61 81 chr2 217993629 217993728 -32694126 + MIR SINE MIR 40 136 -126 244 390 8 32 chr2 217994107 217994230 -32693624 - L2 LINE L2 -183 3089 2970 610 256 110 0 chr2 217994728 217994892 -32692962 + LTR16A LTR ERVL 27 208 -242 2509 52 3 0 chr2 217994999 217995306 -32692548 - AluY SINE Alu -3 308 1 1987 152 7 0 chr2 217995487 217995790 -32692064 - AluSx SINE Alu -7 305 1 33 80 0 0 chr2 217995795 217995870 -32691984 + AT_rich Low_complexity Low_complexity 1 75 0 228 222 0 0 chr2 217996160 217996232 -32691622 + (TA)n Simple_repeat Simple_repeat 2 73 0 253 305 12 37 chr2 217996858 217996940 -32690914 - L2 LINE L2 0 3313 3234 2384 141 64 16 chr2 217997175 217997559 -32690295 - L1PA16 LINE L1 -1 6165 5756 2439 121 30 3 chr2 217997559 217997924 -32689930 - THE1C LTR MaLR 0 375 1 2384 141 64 16 chr2 217997924 217997978 -32689876 - L1PA16 LINE L1 -410 5756 5706 2602 170 37 2 chr2 217997978 217998620 -32689234 + L1PA16 LINE L1 5040 5701 -465 189 74 0 0 chr2 218001326 218001353 -32686501 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 27 29 0 0 chr2 218001628 218001662 -32686192 + AT_rich Low_complexity Low_complexity 1 34 0 311 315 46 0 chr2 218002888 218002996 -32684858 + HAL1 LINE L1 187 299 -2208 1258 303 92 37 chr2 218003002 218003199 -32684655 - MLT1G LTR MaLR -7 583 398 1697 192 25 11 chr2 218003199 218003559 -32684295 + MLT1A1 LTR MaLR 1 365 0 1258 303 92 37 chr2 218003559 218003880 -32683974 - MLT1G LTR MaLR -192 398 36 946 309 143 14 chr2 218003930 218004448 -32683406 + HAL1 LINE L1 381 965 -1542 1595 286 97 21 chr2 218004468 218004542 -32683312 + HAL1 LINE L1 1176 1243 -1264 2253 107 3 0 chr2 218004542 218004842 -32683012 + AluSx SINE Alu 1 301 -11 1595 286 97 21 chr2 218004842 218005578 -32682276 + HAL1 LINE L1 1243 2048 -459 252 200 0 0 chr2 218006122 218006177 -32681677 + (TG)n Simple_repeat Simple_repeat 2 56 0 25 31 0 0 chr2 218006443 218006475 -32681379 + AT_rich Low_complexity Low_complexity 1 32 0 919 320 78 21 chr2 218008660 218009132 -32678722 - LTR33A LTR ERVL -21 502 4 880 167 33 122 chr2 218009291 218009536 -32678318 - MER58A DNA MER1_type 0 224 2 248 323 135 46 chr2 218011908 218012190 -32675664 - L3 LINE CR1 -16 1561 1255 21 0 0 0 chr2 218012331 218012352 -32675502 + AT_rich Low_complexity Low_complexity 1 21 0 321 197 0 0 chr2 218012547 218012608 -32675246 - HsTC2 DNA Tc2 -2 1896 1836 1246 274 121 21 chr2 218014291 218014769 -32673085 + MLT1H LTR MaLR 4 529 -20 298 291 58 19 chr2 218015197 218015300 -32672554 + MER5A DNA MER1_type 16 122 -67 450 296 0 17 chr2 218015694 218015809 -32672045 - MLT2E LTR ERVL -484 144 32 312 27 0 0 chr2 218016302 218016339 -32671515 + (TG)n Simple_repeat Simple_repeat 2 38 0 495 298 82 7 chr2 218016420 218016611 -32671243 - MIR SINE MIR -56 206 4 12897 139 45 22 chr2 218017884 218019734 -32668120 + Tigger1 DNA MER2_type 3 1916 -502 2129 131 0 0 chr2 218019734 218020031 -32667823 - AluSx SINE Alu -15 297 1 12897 139 45 22 chr2 218020031 218020439 -32667415 + Tigger1 DNA MER2_type 1916 2313 -105 5944 141 9 3 chr2 218020453 218021912 -32665942 - L1PA15 LINE L1 -21 6144 4678 645 140 0 0 chr2 218021943 218022036 -32665818 + Tigger1 DNA MER2_type 2326 2418 0 866 239 94 38 chr2 218022221 218022573 -32665281 + L1ME LINE L1 4182 4560 -1586 1784 161 80 6 chr2 218022573 218022922 -32664932 - THE1C LTR MaLR 0 375 1 866 239 94 38 chr2 218022922 218022962 -32664892 + L1ME LINE L1 4560 4596 -1550 821 255 129 27 chr2 218023063 218023693 -32664161 + L1ME LINE L1 4774 5473 -689 * 1221 249 23 7 chr2 218023691 218023992 -32663862 + L1MC4a LINE L1 5354 5659 -507 879 186 93 0 chr2 218024294 218024487 -32663367 + Tigger7 DNA MER2_type 2377 2587 0 901 172 75 23 chr2 218025008 218025182 -32662672 - MER7A DNA MER2_type -165 181 1 1778 257 78 29 chr2 218025214 218025767 -32662087 - L2 LINE L2 -946 2368 1789 351 292 66 70 chr2 218025892 218026135 -32661719 + L1MC4a LINE L1 5683 5924 -1884 244 231 0 0 chr2 218028816 218028868 -32658986 - L2 LINE L2 -9 3304 3253 1350 288 58 45 chr2 218029583 218029778 -32658076 - MLT1F LTR MaLR 0 542 351 2251 163 57 5 chr2 218029778 218030183 -32657671 - MSTB LTR MaLR 0 426 1 1350 288 58 45 chr2 218030183 218030521 -32657333 - MLT1F LTR MaLR -191 351 2 21 36 0 0 chr2 218030973 218031001 -32656853 + AT_rich Low_complexity Low_complexity 1 28 0 255 261 23 11 chr2 218031500 218031588 -32656266 + MER110A LTR ERV1 81 169 -299 471 267 49 36 chr2 218031663 218031903 -32655951 + MER110A LTR ERV1 197 457 -11 2268 97 0 0 chr2 218032197 218032495 -32655359 + AluSg SINE Alu 1 298 -12 366 254 135 35 chr2 218033861 218034095 -32653759 - MLT1H LTR MaLR -3 550 303 27 0 0 0 chr2 218034292 218034319 -32653535 + AT_rich Low_complexity Low_complexity 1 27 0 269 304 98 0 chr2 218034387 218034479 -32653375 - MLT1H LTR MaLR -369 180 80 885 101 72 0 chr2 218034776 218034915 -32652939 - L1PA13 LINE L1 0 6163 6015 691 304 101 0 chr2 218036339 218036576 -32651278 + MIR SINE MIR 2 262 0 22 0 0 0 chr2 218036951 218036973 -32650881 + AT_rich Low_complexity Low_complexity 1 22 0 387 0 0 0 chr2 218037931 218037974 -32649880 + (CA)n Simple_repeat Simple_repeat 2 44 0 24 53 0 0 chr2 218039218 218039256 -32648598 + AT_rich Low_complexity Low_complexity 1 38 0 246 300 23 77 chr2 218039381 218039511 -32648343 + MIR SINE MIR 109 231 -31 642 306 116 31 chr2 218039652 218040041 -32647813 - MLT1K LTR MaLR -7 581 160 393 250 10 48 chr2 218040417 218040521 -32647333 - MLT1A1 LTR MaLR -78 471 372 2115 171 53 19 chr2 218041069 218041483 -32646371 + MSTC LTR MaLR 1 428 0 205 156 0 0 chr2 218041495 218041527 -32646327 + GA-rich Low_complexity Low_complexity 1 32 0 213 94 0 0 chr2 218042261 218042293 -32645561 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1202 287 82 123 chr2 218042368 218043768 -32644086 - L2 LINE L2 -319 2994 1651 269 187 13 0 chr2 218045265 218045340 -32642514 + (TG)n Simple_repeat Simple_repeat 2 77 0 1297 208 86 4 chr2 218045783 218046062 -32641792 - MLT1D LTR MaLR -52 453 152 1623 179 8 56 chr2 218046115 218046472 -32641382 - MLT1A1 LTR MaLR -25 340 1 642 260 34 0 chr2 218046474 218046620 -32641234 - MLT1D LTR MaLR -352 153 3 29 60 0 0 chr2 218047515 218047565 -32640289 + AT_rich Low_complexity Low_complexity 1 50 0 252 0 0 0 chr2 218048948 218048976 -32638878 + (TG)n Simple_repeat Simple_repeat 2 29 0 1050 292 143 0 chr2 218049055 218049446 -32638408 - MLT1J LTR MaLR -64 447 1 251 268 0 0 chr2 218049549 218049605 -32638249 + CT-rich Low_complexity Low_complexity 2 57 0 207 337 129 0 chr2 218049623 218049724 -32638130 - L2 LINE L2 -18 3254 3141 2199 106 0 13 chr2 218049919 218050221 -32637633 + AluSg SINE Alu 1 298 -12 535 310 66 41 chr2 218050259 218050652 -32637202 + MLT1I LTR MaLR 5 407 -2 23 0 0 0 chr2 218052048 218052071 -32635783 + AT_rich Low_complexity Low_complexity 1 23 0 51 31 0 0 chr2 218052364 218052429 -32635425 + AT_rich Low_complexity Low_complexity 1 65 0 291 196 18 36 chr2 218052467 218052579 -32635275 + (TTATA)n Simple_repeat Simple_repeat 1 110 0 982 292 66 25 chr2 218055218 218055746 -32632108 - L1MEc LINE L1 -3128 3087 2538 594 304 59 10 chr2 218055769 218056119 -32631735 - L1MEc LINE L1 -3760 2492 2135 314 281 90 51 chr2 218056373 218056551 -32631303 - L1MEc LINE L1 -4579 1817 1633 2596 128 29 17 chr2 218056558 218056966 -32630888 + MLT2A2 LTR ERVL 1 413 -40 296 87 0 22 chr2 218057012 218057058 -32630796 - MLT2A2 LTR ERVL -10 443 399 377 179 35 40 chr2 218057059 218057353 -32630501 + (TATAA)n Simple_repeat Simple_repeat 1 292 0 381 93 87 6 chr2 218057361 218057522 -32630332 + (TA)n Simple_repeat Simple_repeat 1 174 0 42 36 0 0 chr2 218057522 218057578 -32630276 + AT_rich Low_complexity Low_complexity 1 56 0 386 85 91 6 chr2 218057578 218057743 -32630111 + (TA)n Simple_repeat Simple_repeat 2 180 0 502 80 83 25 chr2 218057757 218058331 -32629523 + (TA)n Simple_repeat Simple_repeat 1 607 0 32972 84 41 25 chr2 218058334 218058942 -32628912 + HERVL-A2 LTR ERVL 702 1299 -4355 182 278 70 104 chr2 218058942 218059057 -32628797 + MER5B DNA MER1_type 66 176 -2 32972 84 41 25 chr2 218059057 218063162 -32624692 + HERVL-A2 LTR ERVL 1299 5654 0 2700 113 46 0 chr2 218063162 218063553 -32624301 + MLT2A2 LTR ERVL 1 409 -44 204 276 35 0 chr2 218063565 218063652 -32624202 + (TA)n Simple_repeat Simple_repeat 1 90 0 390 21 0 0 chr2 218063666 218063713 -32624141 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 298 77 0 0 chr2 218063715 218063754 -32624100 + MLT2A2 LTR ERVL 413 451 -2 31 82 0 0 chr2 218064038 218064111 -32623743 + AT_rich Low_complexity Low_complexity 1 73 0 247 261 50 33 chr2 218064223 218064403 -32623451 - L1M4 LINE L1 -2634 3512 3330 9401 205 20 6 chr2 218064463 218066666 -32621188 - L1 LINE L1 -846 5300 3068 497 283 142 74 chr2 218066676 218067273 -32620581 - L1MEd LINE L1 -5052 1067 430 2736 176 123 44 chr2 218067276 218067958 -32619896 + LTR28 LTR ERV1 1 736 -284 332 150 100 0 chr2 218067945 218068005 -32619849 + LTR27 LTR ERV1 568 633 -3 * 278 302 107 29 chr2 218068178 218068383 -32619471 - L1MEd LINE L1 -5880 239 19 312 357 65 30 chr2 218068399 218068567 -32619287 + L2 LINE L2 3096 3269 -3 342 0 0 0 chr2 218070785 218070823 -32617031 + (TG)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 218070840 218070861 -32616993 + AT_rich Low_complexity Low_complexity 1 21 0 787 241 25 25 chr2 218071326 218071529 -32616325 - MER20 DNA MER1_type -12 207 5 21 0 0 0 chr2 218071842 218071863 -32615991 + AT_rich Low_complexity Low_complexity 1 21 0 2230 96 0 7 chr2 218072033 218072336 -32615518 + AluSg SINE Alu 1 301 -9 1167 320 64 50 chr2 218073807 218074354 -32613500 - HERV16 LTR ERVL -4103 893 328 2166 93 0 7 chr2 218074354 218074654 -32613200 + AluSc SINE Alu 1 298 -11 1167 320 64 50 chr2 218074654 218074986 -32612868 - HERV16 LTR ERVL -4668 328 2 550 331 22 0 chr2 218074993 218075177 -32612677 - LTR16A LTR ERVL -6 444 257 414 39 0 0 chr2 218075183 218075235 -32612619 + (TC)n Simple_repeat Simple_repeat 1 52 0 198 0 0 0 chr2 218075234 218075256 -32612598 + (CA)n Simple_repeat Simple_repeat 1 22 0 * 321 287 55 72 chr2 218075335 218075516 -32612338 + MIR SINE MIR 75 252 -10 531 306 103 67 chr2 218075953 218076342 -32611512 + MLT1K LTR MaLR 126 534 -54 1313 156 37 0 chr2 218076342 218076585 -32611269 - L1MA5A LINE L1 -3 6294 6043 531 306 103 67 chr2 218076585 218076630 -32611224 + MLT1K LTR MaLR 534 576 -12 230 358 0 0 chr2 218076717 218076784 -32611070 + L2 LINE L2 3239 3305 -8 192 77 0 0 chr2 218076855 218076881 -32610973 + (TG)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr2 218076964 218076987 -32610867 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr2 218077158 218077208 -32610646 + AT_rich Low_complexity Low_complexity 1 50 0 1805 104 11 4 chr2 218077381 218077641 -32610213 - AluSx SINE Alu -9 303 42 21 0 0 0 chr2 218078169 218078190 -32609664 + AT_rich Low_complexity Low_complexity 1 21 0 2088 74 0 92 chr2 218078562 218078898 -32608956 + AluY SINE Alu 1 305 -6 366 254 135 35 chr2 218080904 218081138 -32606716 - MLT1H LTR MaLR -3 550 303 27 0 0 0 chr2 218081335 218081362 -32606492 + AT_rich Low_complexity Low_complexity 1 27 0 885 101 72 0 chr2 218081819 218081958 -32605896 - L1PA13 LINE L1 0 6163 6015 25 0 0 0 chr2 218083756 218083781 -32604073 + AT_rich Low_complexity Low_complexity 1 25 0 329 250 47 66 chr2 218087094 218087306 -32600548 - L1MC4 LINE L1 -1 8041 7834 2368 250 85 38 chr2 218087361 218088459 -32599395 - L1ME2 LINE L1 -10 6154 5005 321 47 0 0 chr2 218088465 218088508 -32599346 + (CA)n Simple_repeat Simple_repeat 2 44 0 617 371 20 8 chr2 218088859 218089107 -32598747 - L2 LINE L2 -3056 258 8 391 236 75 11 chr2 218089399 218089573 -32598281 + L1ME3 LINE L1 2835 3019 -3127 23 92 0 0 chr2 218089631 218089696 -32598158 + AT_rich Low_complexity Low_complexity 1 65 0 672 208 0 0 chr2 218089737 218089857 -32597997 + AluJb SINE Alu 156 275 -37 405 0 0 0 chr2 218089857 218089902 -32597952 + (TG)n Simple_repeat Simple_repeat 1 45 0 389 169 0 22 chr2 218089915 218090004 -32597850 + GA-rich Low_complexity Low_complexity 2 88 0 432 289 172 18 chr2 218090004 218090277 -32597577 + L1ME3 LINE L1 3190 3504 -2642 1873 207 90 12 chr2 218090279 218090767 -32597087 + L1ME2 LINE L1 5523 6048 -116 564 310 110 29 chr2 218091858 218093136 -32594718 + L1ME3 LINE L1 4062 5541 -621 1675 236 51 33 chr2 218093136 218093627 -32594227 + MLT1D LTR MaLR 2 501 -4 564 310 110 29 chr2 218093627 218094004 -32593850 + L1ME3 LINE L1 5541 5886 -276 917 206 61 88 chr2 218094209 218094617 -32593237 + MLT2C1 LTR ERVL 1 397 0 2135 75 3 0 chr2 218094788 218095125 -32592729 + AluY SINE Alu 1 338 0 229 310 60 10 chr2 218095826 218095926 -32591928 + MIR SINE MIR 66 170 -92 223 261 54 11 chr2 218097419 218097511 -32590343 - MIR SINE MIR 0 262 167 443 247 0 124 chr2 218097623 218097801 -32590053 - MIR SINE MIR -50 212 57 1194 213 117 44 chr2 218097862 218098365 -32589489 - L1MC5 LINE L1 -121 7840 7301 236 224 86 0 chr2 218098420 218098478 -32589376 - MIR SINE MIR -186 76 14 391 374 94 31 chr2 218099481 218099799 -32588055 - L2 LINE L2 -58 3214 2877 602 344 92 31 chr2 218100028 218100703 -32587151 - L2 LINE L2 -737 2577 1862 273 209 75 15 chr2 218101144 218101211 -32586643 - MER117 DNA MER1_type -113 84 14 * 383 267 0 0 chr2 218101196 218101286 -32586568 + MER117 DNA MER1_type 73 162 -35 26 64 0 0 chr2 218103204 218103251 -32584603 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr2 218103874 218103902 -32583952 + AT_rich Low_complexity Low_complexity 1 28 0 221 173 0 58 chr2 218104115 218104167 -32583687 + A-rich Low_complexity Low_complexity 3 51 0 364 158 10 10 chr2 218104473 218104574 -32583280 + (TA)n Simple_repeat Simple_repeat 1 101 0 511 304 7 7 chr2 218107724 218107862 -32579992 + MER5B DNA MER1_type 1 138 -40 389 318 81 49 chr2 218107928 218108236 -32579618 - HAL1 LINE L1 -2185 322 5 1487 219 118 26 chr2 218109800 218110245 -32577609 - MLT2B1 LTR ERVL 0 554 3 1325 274 51 30 chr2 218112175 218112610 -32575244 + LTR16B LTR ERVL 20 463 -1 436 376 52 39 chr2 218112611 218113053 -32574801 + L2 LINE L2 2076 2523 -791 231 279 47 68 chr2 218113121 218113311 -32574543 + HAL1 LINE L1 193 378 -2129 280 235 62 25 chr2 218113428 218113509 -32574345 + HAL1 LINE L1 546 629 -1878 236 294 35 12 chr2 218113631 218113716 -32574138 + HAL1 LINE L1 754 840 -1667 413 235 110 15 chr2 218114036 218114236 -32573618 + HAL1 LINE L1 1963 2181 -326 906 207 83 0 chr2 218114392 218114561 -32573293 - MER5A DNA MER1_type -5 184 2 202 292 176 19 chr2 218116381 218116494 -32571360 + MIR SINE MIR 24 142 -66 319 302 8 54 chr2 218116948 218117077 -32570777 + L2 LINE L2 3145 3267 -5 187 401 80 7 chr2 218117069 218117206 -32570648 - L2 LINE L2 -453 2861 2715 * 537 256 47 10 chr2 218117797 218118068 -32569786 - L1MD3 LINE L1 -3 7982 6026 267 214 78 19 chr2 218118579 218118682 -32569172 + HAL1 LINE L1 1950 2058 -449 5388 241 56 41 chr2 218118752 218118906 -32568948 + L1MDa LINE L1 2419 2569 -3971 2274 85 10 0 chr2 218118906 218119200 -32568654 - AluY SINE Alu -14 297 1 5388 241 56 41 chr2 218119200 218119237 -32568617 + L1MDa LINE L1 2569 2604 -3936 2603 222 51 11 chr2 218119237 218119863 -32567991 + MER82 DNA MER2_type 2 652 -1 5388 241 56 41 chr2 218119863 218120599 -32567255 + L1MDa LINE L1 2604 3327 -3213 3823 30 4 0 chr2 218120599 218121059 -32566795 + L1PA4 LINE L1 5691 6152 -3 5388 241 56 41 chr2 218121059 218122027 -32565827 + L1MDa LINE L1 3327 4367 -2173 3176 207 28 73 chr2 218122027 218122514 -32565340 + MER21B LTR ERV1 1 430 -433 2061 140 7 0 chr2 218122514 218122821 -32565033 + AluSx SINE Alu 1 309 -3 3176 207 28 73 chr2 218122821 218123235 -32564619 + MER21B LTR ERV1 430 861 -2 5388 241 56 41 chr2 218123235 218123600 -32564254 + L1MDa LINE L1 4367 4725 -1815 263 277 8 62 chr2 218123673 218123729 -32564125 + L1MDa LINE L1 4730 4787 -1753 1368 184 153 48 chr2 218123729 218124148 -32563706 + MER31B LTR ERV1 1 463 -3 263 277 8 62 chr2 218124148 218124221 -32563633 + L1MDa LINE L1 4787 4852 -1688 945 85 0 57 chr2 218125187 218125328 -32562526 + L1PA8 LINE L1 6022 6154 -18 1578 85 0 0 chr2 218125661 218125872 -32561982 - L1PA7 LINE L1 -8 6146 5936 1057 220 116 39 chr2 218126403 218126662 -32561192 + AluJo SINE Alu 1 279 -33 458 0 35 0 chr2 218126662 218126719 -32561135 + (GAAA)n Simple_repeat Simple_repeat 1 59 0 226 319 29 31 chr2 218127103 218127315 -32560539 + MIR SINE MIR 4 262 0 26 0 0 0 chr2 218128605 218128631 -32559223 + AT_rich Low_complexity Low_complexity 1 26 0 191 250 96 0 chr2 218128909 218128961 -32558893 + MIR SINE MIR 21 77 -131 472 324 6 18 chr2 218129874 218130044 -32557810 - L3 LINE CR1 -121 1456 1289 2310 182 28 15 chr2 218130248 218130709 -32557145 - MLT1C LTR MaLR 0 467 1 508 275 84 17 chr2 218130726 218130904 -32556950 + MIR SINE MIR 73 262 0 416 310 157 28 chr2 218131308 218131563 -32556291 - L3 LINE CR1 -355 1222 935 599 70 0 12 chr2 218131643 218131729 -32556125 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 1016 239 57 48 chr2 218131729 218132063 -32555791 - MLT2C1 LTR ERVL -60 337 1 395 235 112 0 chr2 218132076 218132174 -32555680 + MER117 DNA MER1_type 35 143 -54 2343 45 45 0 chr2 218133656 218133943 -32553911 - AluY SINE Alu -11 300 1 826 231 18 27 chr2 218134022 218134243 -32553611 + MER20 DNA MER1_type 1 219 0 29 0 0 0 chr2 218134552 218134581 -32553273 + AT_rich Low_complexity Low_complexity 1 29 0 2707 13 40 0 chr2 218134910 218135214 -32552640 - AluYb8 SINE Alu -2 316 1 748 204 97 0 chr2 218136327 218136513 -32551341 + LTR50 LTR ERVL 4 207 -588 366 300 80 23 chr2 218136552 218136838 -32551016 + LTR50 LTR ERVL 299 461 -62 26 0 0 0 chr2 218137188 218137214 -32550640 + AT_rich Low_complexity Low_complexity 1 26 0 331 281 156 11 chr2 218138063 218138326 -32549528 + L1 LINE L1 2720 3020 -3126 386 340 65 7 chr2 218138427 218138580 -32549274 + MIR SINE MIR 28 189 -73 301 341 65 0 chr2 218139537 218139660 -32548194 - MIR SINE MIR -65 197 67 30 27 0 0 chr2 218140705 218140742 -32547112 + AT_rich Low_complexity Low_complexity 1 37 0 210 220 0 20 chr2 218141411 218141461 -32546393 + MER5B DNA MER1_type 3 51 -127 5763 177 4 98 chr2 218141461 218142989 -32544865 + L1 LINE L1 3644 5027 -1119 189 0 0 0 chr2 218142990 218143011 -32544843 + (TA)n Simple_repeat Simple_repeat 1 21 0 2542 87 11 0 chr2 218143025 218143380 -32544474 + L1PB1 LINE L1 5792 6150 -1 265 250 12 71 chr2 218143453 218143537 -32544317 + MER5B DNA MER1_type 100 178 0 836 234 29 0 chr2 218143545 218143716 -32544138 + MER5A DNA MER1_type 1 176 -13 42854 33 22 1 chr2 218144482 218150506 -32537348 + L1PA2 LINE L1 1 6155 0 3047 177 46 14 chr2 218152019 218152111 -32535743 - L1MB4 LINE L1 -266 5914 5826 2674 16 7 3 chr2 218152111 218152417 -32535437 - AluY SINE Alu -4 307 1 3047 177 46 14 chr2 218152417 218153112 -32534742 - L1MB4 LINE L1 -354 5826 5099 840 228 15 0 chr2 218153122 218153324 -32534530 + L1MB4 LINE L1 5938 6142 -38 8687 184 24 8 chr2 218153324 218154877 -32532977 + L1M1 LINE L1 12 1589 -5976 1437 98 0 5 chr2 218154881 218155095 -32532759 + L1MA3 LINE L1 6093 6305 0 286 111 0 0 chr2 218155098 218155152 -32532702 + L1MB4 LINE L1 6126 6179 -1 1947 121 4 4 chr2 218155199 218155480 -32532374 - AluSc SINE Alu 0 309 29 23 33 0 0 chr2 218155486 218155516 -32532338 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 218155736 218155758 -32532096 + AT_rich Low_complexity Low_complexity 1 22 0 1387 180 28 45 chr2 218156789 218156930 -32530924 + AluJb SINE Alu 1 143 -164 189 0 0 0 chr2 218156930 218156951 -32530903 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1387 180 28 45 chr2 218156951 218157121 -32530733 + AluJb SINE Alu 143 307 0 189 0 0 0 chr2 218157413 218157434 -32530420 + (TTTTTA)n Simple_repeat Simple_repeat 4 24 0 465 249 203 30 chr2 218158689 218158886 -32528968 + MIR SINE MIR 21 251 -11 1951 136 20 73 chr2 218158951 218159347 -32528507 - THE1C LTR MaLR 0 375 1 663 260 47 6 chr2 218160131 218160300 -32527554 - MIR SINE MIR -65 197 22 2115 210 30 14 chr2 218160770 218161204 -32526650 + MER70B LTR ERVL 1 441 -137 687 267 112 10 chr2 218162121 218162327 -32525527 + MIR SINE MIR 5 231 -31 481 317 118 46 chr2 218162526 218162685 -32525169 + L2 LINE L2 2635 2781 -532 427 254 23 15 chr2 218162685 218162815 -32525039 + MER94 DNA DNA 4 134 0 481 317 118 46 chr2 218162815 218163276 -32524578 + L2 LINE L2 2781 3308 -5 27 29 0 0 chr2 218164568 218164602 -32523252 + AT_rich Low_complexity Low_complexity 1 34 0 348 302 40 20 chr2 218165339 218165488 -32522366 - MIR SINE MIR 0 262 111 2209 56 0 8 chr2 218166087 218166354 -32521500 + AluY SINE Alu 29 293 -18 247 281 5 0 chr2 218166356 218166434 -32521420 - MIR SINE MIR -62 146 74 198 407 78 25 chr2 218166515 218166758 -32521096 - L2 LINE L2 -213 3059 2804 180 111 0 0 chr2 218166811 218166838 -32521016 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 1773 132 0 11 chr2 218166841 218167114 -32520740 - AluSx SINE Alu 0 312 43 369 264 167 42 chr2 218167254 218167398 -32520456 - MER5A DNA MER1_type -3 186 25 428 326 34 17 chr2 218168230 218168408 -32519446 - MER5A DNA MER1_type -6 183 3 1837 58 0 5 chr2 218169958 218170181 -32517673 + AluY SINE Alu 79 300 -11 297 0 0 0 chr2 218170667 218170700 -32517154 + (TG)n Simple_repeat Simple_repeat 2 34 0 199 293 85 12 chr2 218170954 218171036 -32516818 + L2 LINE L2 3171 3258 -14 770 185 0 15 chr2 218171050 218171185 -32516669 - FLAM_C SINE Alu 0 133 1 259 318 45 0 chr2 218171242 218171352 -32516502 + L2 LINE L2 2745 2859 -455 24 0 0 0 chr2 218171593 218171617 -32516237 + AT_rich Low_complexity Low_complexity 1 24 0 368 367 65 0 chr2 218171708 218171877 -32515977 - MIR SINE MIR 0 262 83 5130 50 23 26 chr2 218171939 218172635 -32515219 + L1PA8 LINE L1 5476 6169 -3 812 196 0 0 chr2 218172829 218172962 -32514892 + AluJb SINE Alu 1 133 -179 213 94 0 0 chr2 218173384 218173416 -32514438 + (CA)n Simple_repeat Simple_repeat 1 32 0 1930 122 35 32 chr2 218173853 218174165 -32513689 + AluSp SINE Alu 1 313 0 2031 160 0 0 chr2 218174388 218174695 -32513159 - AluSx SINE Alu -5 307 1 941 239 33 9 chr2 218174812 218175025 -32512829 - MER20 DNA MER1_type -1 218 1 21 57 0 0 chr2 218175083 218175118 -32512736 + AT_rich Low_complexity Low_complexity 1 35 0 241 301 36 72 chr2 218176946 218177112 -32510742 - LTR16C LTR ERVL 0 491 332 21 0 0 0 chr2 218179393 218179414 -32508440 + AT_rich Low_complexity Low_complexity 1 21 0 17015 36 1 1 chr2 218179452 218182297 -32505557 - L1PA5 LINE L1 0 6154 3309 309 314 68 0 chr2 218183515 218183633 -32504221 - MIR SINE MIR -8 254 129 233 173 49 37 chr2 218183664 218183745 -32504109 + (TAGA)n Simple_repeat Simple_repeat 1 82 0 22 35 0 0 chr2 218183765 218183794 -32504060 + AT_rich Low_complexity Low_complexity 1 29 0 1561 178 11 42 chr2 218184252 218184539 -32503315 + AluJo SINE Alu 1 278 -34 816 88 0 0 chr2 218184544 218184658 -32503196 + (GGAA)n Simple_repeat Simple_repeat 3 116 0 183 247 129 11 chr2 218185353 218185446 -32502408 - L3b LINE CR1 -303 1280 1177 1882 118 72 11 chr2 218187026 218187305 -32500549 - AluSg SINE Alu -14 296 1 1943 120 83 8 chr2 218187463 218187838 -32500016 + LTR7 LTR ERV1 1 450 0 13981 136 19 36 chr2 218187838 218190556 -32497298 + HERVH LTR ERV1 1 2995 -4718 2657 173 11 0 chr2 218190535 218190992 -32496862 + HERVH LTR ERV1 3140 3601 -4112 * 6678 122 4 4 chr2 218190983 218192117 -32495737 + HERVH LTR ERV1 3840 5286 -1805 1477 193 7 0 chr2 218192117 218192397 -32495457 + HERVH LTR ERV1 5747 6028 -1685 * 3690 112 11 9 chr2 218192379 218192935 -32494919 + HERVH LTR ERV1 7157 7713 0 1913 111 96 21 chr2 218192935 218193310 -32494544 + LTR7 LTR ERV1 1 450 0 5124 70 2 0 chr2 218193409 218194025 -32493829 - L1PA6 LINE L1 -2 6152 5536 1607 44 48 5 chr2 218194026 218194298 -32493556 + L1P2 LINE L1 5202 5485 -669 16124 31 0 0 chr2 218294902 218297609 -32390245 + L1PA2 LINE L1 3444 6152 -3 230 264 0 0 chr2 218297616 218297669 -32390185 + MER112 DNA MER1_type 197 249 -11 251 344 156 29 chr2 218297742 218298018 -32389836 + L3 LINE CR1 98 408 -1169 533 242 23 23 chr2 218298100 218298232 -32389622 + MLT1J2 LTR MaLR 31 162 -288 2106 295 85 46 chr2 218298255 218298297 -32389557 + L2 LINE L2 1572 1611 -1703 1470 187 7 13 chr2 218298297 218298596 -32389258 - AluJo SINE Alu -15 297 1 2106 295 85 46 chr2 218298596 218299641 -32388213 + L2 LINE L2 1611 2701 -613 35 63 0 0 chr2 218300069 218300132 -32387722 + AT_rich Low_complexity Low_complexity 1 63 0 1534 193 0 61 chr2 218300772 218301099 -32386755 - AluJo SINE Alu -3 309 3 26 30 0 0 chr2 218301191 218301224 -32386630 + AT_rich Low_complexity Low_complexity 1 33 0 21 82 0 0 chr2 218303710 218303759 -32384095 + AT_rich Low_complexity Low_complexity 1 49 0 1901 145 3 13 chr2 218304140 218304443 -32383411 - AluSx SINE Alu -12 300 1 619 325 173 16 chr2 218304791 218305114 -32382740 + L2 LINE L2 2931 3304 -9 243 0 0 0 chr2 218305938 218305965 -32381889 + (CA)n Simple_repeat Simple_repeat 2 28 0 298 237 10 72 chr2 218306461 218306558 -32381296 + L2 LINE L2 3173 3263 -50 23577 39 44 5 chr2 218307221 218310224 -32377630 + L1P LINE L1 2 3121 -3025 252 0 0 0 chr2 218310794 218310822 -32377032 + (CA)n Simple_repeat Simple_repeat 2 29 0 257 374 32 8 chr2 218311566 218311689 -32376165 + MIR SINE MIR 13 138 -124 189 0 0 0 chr2 218314272 218314293 -32373561 + (GAAAA)n Simple_repeat Simple_repeat 4 24 0 341 285 78 28 chr2 218314858 218315037 -32372817 + MIR SINE MIR 73 260 -2 1786 176 87 71 chr2 218315435 218315930 -32371924 - MLT1D LTR MaLR 0 505 3 250 123 0 62 chr2 218316043 218316108 -32371746 - LTR66 LTR ERVL -152 458 398 330 132 0 0 chr2 218316113 218316166 -32371688 + (TG)n Simple_repeat Simple_repeat 2 54 0 1308 313 94 26 chr2 218316203 218316901 -32370953 - L2 LINE L2 -250 3063 2315 1988 92 7 10 chr2 218316979 218317271 -32370583 - L1PA13 LINE L1 -13 6150 5860 284 295 23 0 chr2 218317289 218317394 -32370460 + MLT1J1 LTR MaLR 46 152 -294 362 291 15 30 chr2 218317597 218317731 -32370123 - L2 LINE L2 -995 2319 2188 26 0 0 0 chr2 218319305 218319331 -32368523 + AT_rich Low_complexity Low_complexity 1 26 0 27 0 0 0 chr2 218319356 218319383 -32368471 + AT_rich Low_complexity Low_complexity 1 27 0 1820 164 34 19 chr2 218319757 218320081 -32367773 - Tigger3(Golem) DNA MER2_type -3 3026 2698 356 233 27 0 chr2 218320084 218320157 -32367697 - Tigger3(Golem) DNA MER2_type -2954 75 1 220 179 0 0 chr2 218320157 218320196 -32367658 + (TG)n Simple_repeat Simple_repeat 2 40 0 2038 133 10 0 chr2 218320337 218320637 -32367217 - AluSx SINE Alu -9 303 1 219 333 0 15 chr2 218320969 218321035 -32366819 - MIR SINE MIR -108 154 90 372 279 62 56 chr2 218321206 218321529 -32366325 + L1ME4a LINE L1 5660 5984 -137 181 277 259 18 chr2 218321529 218321641 -32366213 + MIR SINE MIR 68 206 -56 21 57 0 0 chr2 218322070 218322105 -32365749 + AT_rich Low_complexity Low_complexity 1 35 0 279 291 13 0 chr2 218322296 218322375 -32365479 - MER94 DNA DNA -17 117 38 2076 189 57 68 chr2 218322950 218323510 -32364344 + MLT2B3 LTR ERVL 1 554 0 2157 128 0 0 chr2 218323584 218323889 -32363965 + AluSx SINE Alu 1 305 -7 182 114 0 29 chr2 218324039 218324074 -32363780 + (CCA)n Simple_repeat Simple_repeat 1 34 0 802 286 95 54 chr2 218324878 218325319 -32362535 + MLT1J LTR MaLR 1 459 -52 250 319 148 33 chr2 218325407 218325617 -32362237 - Charlie8 DNA MER1_type -2163 254 21 234 374 28 0 chr2 218326522 218326629 -32361225 - L2 LINE L2 0 3313 3204 7967 183 58 11 chr2 218327616 218329330 -32358524 + L1 LINE L1 3348 5141 -1005 2622 121 38 0 chr2 218329330 218329753 -32358101 + L1MA5A LINE L1 5849 6287 -10 312 307 42 46 chr2 218329811 218330052 -32357802 + L1MC/D LINE L1 5572 5811 -1997 493 312 19 7 chr2 218330164 218330318 -32357536 + MLT1H LTR MaLR 105 260 -289 39 68 0 0 chr2 218330744 218330818 -32357036 + AT_rich Low_complexity Low_complexity 1 74 0 256 161 28 35 chr2 218333082 218333225 -32354629 + (TTATA)n Simple_repeat Simple_repeat 5 146 0 366 352 0 9 chr2 218333579 218333684 -32354170 - L2 LINE L2 -8 3264 3161 415 285 168 11 chr2 218333764 218333813 -32354041 + L2 LINE L2 3107 3147 -166 185 0 0 39 chr2 218333813 218333839 -32354015 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 415 285 168 11 chr2 218333839 218333968 -32353886 + L2 LINE L2 3147 3313 0 24 32 0 0 chr2 218335144 218335175 -32352679 + AT_rich Low_complexity Low_complexity 1 31 0 397 279 184 6 chr2 218335209 218335367 -32352487 - MIR3 SINE MIR -8 200 15 310 351 24 12 chr2 218336609 218336777 -32351077 - L1ME3A LINE L1 -213 5957 5788 249 289 34 67 chr2 218336809 218336958 -32350896 + L2 LINE L2 3104 3247 -66 183 339 15 0 chr2 218337008 218337073 -32350781 + L2 LINE L2 2871 2936 -336 22 0 0 0 chr2 218338134 218338156 -32349698 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 218338325 218338347 -32349507 + AT_rich Low_complexity Low_complexity 1 22 0 2155 84 0 4 chr2 218338966 218339240 -32348614 + AluSq SINE Alu 22 294 -19 218 227 0 0 chr2 218339878 218339922 -32347932 + (TA)n Simple_repeat Simple_repeat 1 44 0 235 156 0 0 chr2 218339925 218339970 -32347884 + LTR66 LTR ERVL 394 438 -172 256 159 0 32 chr2 218340163 218340226 -32347628 + (TA)n Simple_repeat Simple_repeat 1 61 0 248 389 98 26 chr2 218340250 218340443 -32347411 + MIR SINE MIR 37 243 -19 393 213 24 118 chr2 218340556 218340683 -32347171 - MLT1L LTR MaLR -83 532 418 421 242 119 45 chr2 218340728 218340972 -32346882 - MLT1L LTR MaLR -340 275 14 1953 242 32 43 chr2 218343522 218344084 -32343770 - MER68 LTR ERV1 -6 556 1 22 0 0 0 chr2 218344107 218344129 -32343725 + AT_rich Low_complexity Low_complexity 1 22 0 527 322 133 0 chr2 218344569 218344839 -32343015 + L3b LINE CR1 1117 1422 -161 628 250 113 15 chr2 218344873 218345077 -32342777 + MIR SINE MIR 5 228 -34 300 262 32 79 chr2 218345401 218345527 -32342327 + Charlie7 DNA MER1_type 226 345 -2267 451 263 13 0 chr2 218346430 218346586 -32341268 + GA-rich Low_complexity Low_complexity 1 158 0 1476 236 98 55 chr2 218347119 218347381 -32340473 + Charlie7 DNA MER1_type 1 250 -2362 2593 94 8 3 chr2 218347381 218347743 -32340111 + THE1B LTR MaLR 1 364 0 1476 236 98 55 chr2 218347743 218348140 -32339714 + Charlie7 DNA MER1_type 250 689 -1923 33 0 0 0 chr2 218348931 218348964 -32338890 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr2 218350061 218350089 -32337765 + AT_rich Low_complexity Low_complexity 1 28 0 305 340 0 10 chr2 218350120 218350220 -32337634 + L2 LINE L2 3173 3271 -1 198 0 0 0 chr2 218350737 218350759 -32337095 + (CA)n Simple_repeat Simple_repeat 1 22 0 21 0 0 0 chr2 218354003 218354024 -32333830 + AT_rich Low_complexity Low_complexity 1 21 0 1615 124 8 0 chr2 218354317 218354567 -32333287 + L1PA13 LINE L1 5893 6144 -19 1618 197 3 0 chr2 218355113 218355407 -32332447 - AluJo SINE Alu -17 295 1 689 169 73 101 chr2 218355528 218355747 -32332107 + L1MA7 LINE L1 5919 6131 -160 2177 145 37 5 chr2 218355747 218356126 -32331728 - LTR34 LTR ERV1 0 699 309 281 198 161 0 chr2 218356121 218356202 -32331652 - LTR34 LTR ERV1 -601 98 5 * 586 195 31 0 chr2 218356205 218356364 -32331490 + L1MA7 LINE L1 6128 6291 0 234 255 32 64 chr2 218356406 218356462 -32331392 + MIR SINE MIR 102 155 -107 2818 162 47 19 chr2 218356462 218357041 -32330813 + LTR49 LTR ERV1 1 595 0 234 255 32 64 chr2 218357041 218357078 -32330776 + MIR SINE MIR 155 192 -70 2081 114 0 3 chr2 218357159 218357449 -32330405 + AluSx SINE Alu 1 289 -23 522 46 0 0 chr2 218357461 218357526 -32330328 + (TG)n Simple_repeat Simple_repeat 2 66 0 232 295 107 0 chr2 218358632 218358754 -32329100 - MIR SINE MIR -47 215 81 353 96 58 0 chr2 218359122 218359174 -32328680 - MER30B DNA MER1_type -133 57 3 464 276 0 16 chr2 218359358 218359481 -32328373 - MIR SINE MIR -124 138 18 237 252 39 10 chr2 218361756 218361859 -32325995 + (TA)n Simple_repeat Simple_repeat 1 106 0 22 35 0 0 chr2 218362709 218362738 -32325116 + AT_rich Low_complexity Low_complexity 1 29 0 380 274 0 79 chr2 218363888 218364052 -32323802 - MER6 DNA MER2_type -1 864 -7 1731 274 73 56 chr2 218365754 218367219 -32320635 - L1ME3A LINE L1 -12 6158 4660 584 261 6 6 chr2 218367235 218367415 -32320439 + L1M4 LINE L1 4130 4309 -1837 655 215 0 0 chr2 218367415 218367536 -32320318 + L1PB4 LINE L1 6019 6139 -17 2353 42 0 7 chr2 218367795 218368115 -32319739 - AluY SINE Alu 0 318 1 24 77 0 0 chr2 218368403 218368455 -32319399 + AT_rich Low_complexity Low_complexity 1 52 0 249 57 0 0 chr2 218368578 218368613 -32319241 + (TG)n Simple_repeat Simple_repeat 2 36 0 2197 104 3 0 chr2 218370221 218370510 -32317344 - AluSx SINE Alu -22 290 1 534 88 48 0 chr2 218372137 218372262 -32315592 + (TA)n Simple_repeat Simple_repeat 2 132 0 354 208 20 50 chr2 218372262 218372363 -32315491 - L1MC4 LINE L1 -1337 6705 6608 1323 162 12 126 chr2 218372370 218372704 -32315150 - AluJo SINE Alu -6 296 1 23 54 0 0 chr2 218373228 218373265 -32314589 + AT_rich Low_complexity Low_complexity 1 37 0 244 230 14 14 chr2 218373885 218373959 -32313895 + MER116 DNA Mariner 7 80 0 252 231 0 0 chr2 218374014 218374066 -32313788 + LTR30 LTR ERV1 1 52 -670 3369 94 165 126 chr2 218374066 218375005 -32312849 + LTR12 LTR ERV1 57 714 0 768 173 0 0 chr2 218375885 218376018 -32311836 + FLAM_C SINE Alu 1 133 0 1225 144 24 19 chr2 218376029 218376237 -32311617 + AluSq SINE Alu 100 308 -5 272 136 0 15 chr2 218376370 218376436 -32311418 + (TA)n Simple_repeat Simple_repeat 2 66 0 999 111 0 7 chr2 218376685 218376829 -32311025 - AluSp/q SINE Alu -9 304 162 404 284 229 0 chr2 218376834 218377052 -32310802 + L2 LINE L2 2307 2574 -740 1606 97 0 0 chr2 218377240 218377457 -32310397 + AluY SINE Alu 69 285 -26 200 278 0 0 chr2 218377486 218377540 -32310314 + L2 LINE L2 2808 2861 -411 648 102 0 94 chr2 218378100 218378228 -32309626 + LTR9B LTR ERV1 445 560 -84 225 0 0 0 chr2 218378228 218378253 -32309601 + (A)n Simple_repeat Simple_repeat 1 25 0 656 206 48 0 chr2 218378803 218378929 -32308925 - FLAM_A SINE Alu -1 132 1 181 352 29 19 chr2 218380191 218380296 -32307558 + L2 LINE L2 2716 2821 -493 280 200 0 0 chr2 218380390 218380440 -32307414 + MIR SINE MIR 1 50 -212 292 238 0 16 chr2 218380771 218380834 -32307020 + L2 LINE L2 3202 3263 -9 23 33 0 0 chr2 218381934 218381964 -32305890 + AT_rich Low_complexity Low_complexity 1 30 0 206 256 73 37 chr2 218382098 218382180 -32305674 - L2 LINE L2 -1 3271 3187 555 224 9 0 chr2 218382435 218382551 -32305303 + FLAM_A SINE Alu 16 132 -10 283 295 101 22 chr2 218384406 218384545 -32303309 - L3 LINE CR1 -3 1574 1425 27 0 0 0 chr2 218384564 218384591 -32303263 + AT_rich Low_complexity Low_complexity 1 27 0 304 273 120 62 chr2 218384783 218384992 -32302862 - L1MD3 LINE L1 -2098 5897 5677 724 218 83 0 chr2 218385220 218385376 -32302478 + AluJb SINE Alu 136 304 -8 219 36 0 0 chr2 218386229 218386257 -32301597 + (A)n Simple_repeat Simple_repeat 1 28 0 240 100 0 0 chr2 218386660 218386700 -32301154 + (A)n Simple_repeat Simple_repeat 1 40 0 3086 178 52 3 chr2 218387123 218387697 -32300157 + MER7C DNA MER2_type 1 602 0 707 248 86 48 chr2 218388175 218388465 -32299389 + L1ME3 LINE L1 5848 6148 -14 1054 269 59 44 chr2 218388704 218389091 -32298763 + MLT1J LTR MaLR 116 508 -3 2048 129 0 0 chr2 218389471 218389782 -32298072 + AluSx SINE Alu 1 311 -1 316 327 46 28 chr2 218389854 218390071 -32297783 + L1ME LINE L1 4049 4269 -1877 1173 73 0 0 chr2 218390298 218390448 -32297406 - AluSp/q SINE Alu -8 305 156 299 311 264 10 chr2 218390575 218390768 -32297086 - MIR SINE MIR -7 255 14 627 316 87 28 chr2 218390947 218391444 -32296410 + L1ME LINE L1 5279 5804 -317 43 64 0 0 chr2 218391592 218391670 -32296184 + AT_rich Low_complexity Low_complexity 1 78 0 7639 144 23 19 chr2 218392145 218392903 -32294951 + HSMAR2 DNA Mariner 3 770 -532 1597 244 31 78 chr2 218392903 218393545 -32294309 + LTR9 LTR ERV1 1 612 0 7639 144 23 19 chr2 218393545 218394080 -32293774 + HSMAR2 DNA Mariner 770 1301 -1 23 0 0 0 chr2 218394102 218394125 -32293729 + AT_rich Low_complexity Low_complexity 1 23 0 4135 39 16 0 chr2 218394587 218395098 -32292756 + L1PA4 LINE L1 5630 6148 -7 26 0 0 0 chr2 218395098 218395124 -32292730 + AT_rich Low_complexity Low_complexity 1 26 0 214 239 15 15 chr2 218395646 218395713 -32292141 + (TAA)n Simple_repeat Simple_repeat 3 69 0 31 0 0 0 chr2 218395933 218395964 -32291890 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr2 218396021 218396042 -32291812 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2139 110 0 0 chr2 218396044 218396334 -32291520 - AluSx SINE Alu -13 299 10 291 331 26 26 chr2 218396484 218396638 -32291216 + L1ME LINE L1 5453 5606 -556 497 287 39 8 chr2 218397335 218397464 -32290390 - MIR SINE MIR -126 136 4 233 290 60 10 chr2 218397653 218397753 -32290101 - L2 LINE L2 -536 2778 2674 756 297 81 23 chr2 218398479 218398828 -32289026 + MLT1I LTR MaLR 45 409 0 245 319 91 38 chr2 218401398 218401661 -32286193 - L2 LINE L2 -69 3244 2968 1713 248 106 35 chr2 218401686 218402367 -32285487 + HsTC2a DNA Tc2 1 729 -15 318 297 51 110 chr2 218402382 218402736 -32285118 - L2 LINE L2 -46 3267 2935 281 341 143 16 chr2 218402849 218403338 -32284516 - L2 LINE L2 -938 2376 1746 252 0 0 0 chr2 218403576 218403604 -32284250 + (TATTG)n Simple_repeat Simple_repeat 1 28 0 1961 139 4 0 chr2 218403604 218403885 -32283969 - AluSq SINE Alu -31 282 1 759 150 0 0 chr2 218404217 218404344 -32283510 + L1PB4 LINE L1 6030 6156 0 2119 102 16 13 chr2 218405240 218405543 -32282311 - AluSg SINE Alu -6 304 1 279 0 0 0 chr2 218409098 218409129 -32278725 + (TG)n Simple_repeat Simple_repeat 1 31 0 210 37 0 0 chr2 218409131 218409158 -32278696 + (GA)n Simple_repeat Simple_repeat 2 28 0 31 0 0 0 chr2 218409498 218409529 -32278325 + AT_rich Low_complexity Low_complexity 1 31 0 198 266 0 0 chr2 218409657 218409736 -32278118 + (TA)n Simple_repeat Simple_repeat 1 79 0 22 0 0 0 chr2 218411104 218411126 -32276728 + AT_rich Low_complexity Low_complexity 1 22 0 211 59 88 0 chr2 218411815 218411849 -32276005 - MIR SINE MIR -113 149 113 29 28 0 0 chr2 218412746 218412782 -32275072 + AT_rich Low_complexity Low_complexity 1 36 0 306 300 130 0 chr2 218413572 218413672 -32274182 + MIR3 SINE MIR 89 201 -7 30 27 0 0 chr2 218413997 218414034 -32273820 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr2 218414115 218414140 -32273714 + AT_rich Low_complexity Low_complexity 1 25 0 395 297 52 32 chr2 218414926 218415081 -32272773 + MIR SINE MIR 5 162 -100 2243 199 27 93 chr2 218415082 218415674 -32272180 + MLT2B3 LTR ERVL 2 554 0 212 234 149 32 chr2 218415674 218415768 -32272086 + MIR SINE MIR 158 262 0 2309 119 11 24 chr2 218417343 218417720 -32270134 - THE1C LTR MaLR -2 373 2 322 373 47 6 chr2 218418051 218418220 -32269634 - MIR SINE MIR -36 226 51 856 233 10 5 chr2 218418302 218418508 -32269346 - MER3 DNA MER1_type 0 209 3 22 0 0 0 chr2 218418537 218418559 -32269295 + AT_rich Low_complexity Low_complexity 1 22 0 2273 100 0 0 chr2 218419529 218419829 -32268025 + AluY SINE Alu 1 300 -11 242 0 61 0 chr2 218419846 218419879 -32267975 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 198 0 0 0 chr2 218421577 218421599 -32266255 + (T)n Simple_repeat Simple_repeat 1 22 0 272 211 66 13 chr2 218421799 218421875 -32265979 - MIR SINE MIR -74 188 109 881 175 0 0 chr2 218422196 218422382 -32265472 - AluJb SINE Alu 0 326 141 239 137 0 20 chr2 218423919 218423970 -32263884 + (TA)n Simple_repeat Simple_repeat 2 51 0 330 175 10 82 chr2 218423979 218424076 -32263778 - L1MC4 LINE L1 -1339 6703 6614 810 195 26 0 chr2 218424578 218424732 -32263122 - MER5A DNA MER1_type -6 183 26 24 53 0 0 chr2 218426354 218426392 -32261462 + AT_rich Low_complexity Low_complexity 1 38 0 521 73 0 0 chr2 218426446 218426528 -32261326 - AluSp/q SINE Alu 0 313 232 2364 89 0 3 chr2 218428025 218428328 -32259526 + AluSc SINE Alu 1 302 -7 1568 270 140 12 chr2 218428604 218429205 -32258649 + L2 LINE L2 2109 2786 -528 541 201 222 6 chr2 218429221 218429483 -32258371 + MER33 DNA MER1_type 1 355 -8 499 311 98 58 chr2 218429518 218429894 -32257960 + L2 LINE L2 2906 3296 -17 1341 335 103 6 chr2 218429937 218430469 -32257385 + MER115 DNA AcHobo 110 693 0 536 310 95 37 chr2 218432446 218432688 -32255166 + MIR SINE MIR 5 260 -2 1163 48 7 0 chr2 218433114 218433260 -32254594 + L1PA7 LINE L1 6004 6150 -4 231 114 0 0 chr2 218433334 218433369 -32254485 + (A)n Simple_repeat Simple_repeat 1 35 0 981 272 113 20 chr2 218435384 218435781 -32252073 + MER57B LTR ERV1 1 434 0 306 0 0 0 chr2 218435899 218435933 -32251921 + (TG)n Simple_repeat Simple_repeat 2 35 0 23 54 0 0 chr2 218435995 218436032 -32251822 + AT_rich Low_complexity Low_complexity 1 37 0 276 339 154 0 chr2 218436321 218436451 -32251403 + MIR SINE MIR 1 150 -112 23 0 0 0 chr2 218436586 218436609 -32251245 + AT_rich Low_complexity Low_complexity 1 23 0 1475 197 21 3 chr2 218436709 218436999 -32250855 - AluJo SINE Alu -17 295 1 2337 139 5 3 chr2 218437002 218437370 -32250484 + MLT1B LTR MaLR 22 390 0 556 294 112 0 chr2 218437370 218437567 -32250287 + MIR SINE MIR 44 262 0 22 35 0 0 chr2 218438035 218438064 -32249790 + AT_rich Low_complexity Low_complexity 1 29 0 294 280 111 21 chr2 218438387 218438516 -32249338 - MIR SINE MIR -42 166 34 282 148 0 0 chr2 218438975 218439029 -32248825 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 409 327 9 0 chr2 218439030 218439143 -32248711 - L2 LINE L2 -2 3270 3157 225 314 129 16 chr2 218439619 218439743 -32248111 - L2 LINE L2 -2 3270 3133 1453 230 23 58 chr2 218439964 218440399 -32247455 + L1MC5 LINE L1 6687 7106 -855 1764 200 25 0 chr2 218440403 218440718 -32247136 - MLT1A1 LTR MaLR 0 365 43 658 191 23 29 chr2 218440778 218440951 -32246903 + L1MC3 LINE L1 7614 7785 0 * 675 259 38 100 chr2 218440947 218441054 -32246800 + L1MC5 LINE L1 7155 7267 -694 888 259 158 32 chr2 218441054 218441464 -32246390 + LTR40b LTR ERVL 1 462 0 675 259 38 100 chr2 218441464 218441726 -32246128 + L1MC5 LINE L1 7267 7501 -460 336 318 20 36 chr2 218441838 218442033 -32245821 + L1ME3A LINE L1 5962 6153 -17 200 344 162 24 chr2 218442325 218442744 -32245110 - L2 LINE L2 -466 2848 2372 836 146 14 127 chr2 218442991 218443211 -32244643 + MER20 DNA MER1_type 1 195 -24 25 51 0 0 chr2 218443352 218443391 -32244463 + AT_rich Low_complexity Low_complexity 1 39 0 205 128 43 0 chr2 218443477 218443524 -32244330 + CT-rich Low_complexity Low_complexity 1 49 0 189 0 0 0 chr2 218445519 218445540 -32242314 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 22 43 0 21 chr2 218445775 218445798 -32242056 + AT_rich Low_complexity Low_complexity 1 23 -23 1590 199 0 7 chr2 218445798 218446099 -32241755 + AluJo SINE Alu 1 299 -13 22 43 0 21 chr2 218446099 218446122 -32241732 + AT_rich Low_complexity Low_complexity 23 46 0 2198 102 0 0 chr2 218446122 218446406 -32241448 - AluSg SINE Alu -24 286 3 197 377 20 75 chr2 218446746 218446892 -32240962 + L2 LINE L2 3127 3264 -8 270 354 31 0 chr2 218447060 218447156 -32240698 - L2 LINE L2 0 3313 3215 7578 198 20 5 chr2 218449585 218451163 -32236691 - L1PA13 LINE L1 -2815 3331 1731 3010 158 32 11 chr2 218451156 218451693 -32236161 + L1PA13 LINE L1 3361 3908 -2238 * 6725 168 3 20 chr2 218451694 218453074 -32234780 + L1PA13 LINE L1 4044 5402 -761 2365 85 0 0 chr2 218453074 218453368 -32234486 - AluY SINE Alu -17 294 1 6725 168 3 20 chr2 218453368 218454099 -32233755 + L1PA13 LINE L1 5402 6144 -19 185 159 23 0 chr2 218454212 218454256 -32233598 + GA-rich Low_complexity Low_complexity 3 47 0 292 324 93 36 chr2 218454318 218454457 -32233397 + MIR3 SINE MIR 48 194 -14 662 206 6 46 chr2 218454472 218454647 -32233207 + AluJb SINE Alu 133 300 -12 21 0 0 0 chr2 218454790 218454811 -32233043 + AT_rich Low_complexity Low_complexity 1 21 0 1487 202 11 3 chr2 218454859 218455141 -32232713 - AluJo SINE Alu -20 292 9 24 0 0 0 chr2 218456521 218456545 -32231309 + AT_rich Low_complexity Low_complexity 1 24 0 187 271 21 0 chr2 218456768 218456816 -32231038 + MIR SINE MIR 68 116 -146 243 0 0 0 chr2 218457399 218457426 -32230428 + (A)n Simple_repeat Simple_repeat 1 27 0 1216 164 3 76 chr2 218457440 218457757 -32230097 + AluSq SINE Alu 5 298 -15 516 105 0 0 chr2 218458248 218458324 -32229530 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 724 201 49 7 chr2 218458330 218458474 -32229380 - FRAM SINE Alu -29 147 1 206 370 54 0 chr2 218459627 218459719 -32228135 + L2 LINE L2 3179 3275 -38 1377 287 64 14 chr2 218460550 218461111 -32226743 - Charlie7 DNA MER1_type -1815 797 209 33 43 0 0 chr2 218461909 218461956 -32225898 + AT_rich Low_complexity Low_complexity 1 47 0 27 0 0 0 chr2 218462007 218462034 -32225820 + AT_rich Low_complexity Low_complexity 1 27 0 226 349 94 16 chr2 218462222 218462464 -32225390 - L2 LINE L2 -266 3047 2784 228 239 22 139 chr2 218462509 218462689 -32225165 + LTR37A LTR ERV1 19 177 -249 245 326 122 25 chr2 218462935 218463303 -32224551 - L2 LINE L2 -530 2784 2381 1294 206 25 117 chr2 218463830 218464232 -32223622 - MLT1A1 LTR MaLR 0 365 1 323 376 74 20 chr2 218464382 218464531 -32223323 + L2 LINE L2 3100 3256 -16 1563 113 60 36 chr2 218464623 218464871 -32222983 - AluSq SINE Alu -15 298 45 194 173 0 19 chr2 218465142 218465194 -32222660 + GA-rich Low_complexity Low_complexity 2 52 0 47 73 0 0 chr2 218465543 218465639 -32222215 + AT_rich Low_complexity Low_complexity 1 96 0 1723 206 83 16 chr2 218465778 218466211 -32221643 + MLT1C LTR MaLR 6 467 0 349 298 0 0 chr2 218466236 218466320 -32221534 - MIR SINE MIR -73 135 52 284 265 175 53 chr2 218466468 218466657 -32221197 + MIR SINE MIR 30 241 -21 1990 154 0 0 chr2 218466926 218467232 -32220622 + AluSx SINE Alu 5 310 -2 22 35 0 0 chr2 218467249 218467278 -32220576 + AT_rich Low_complexity Low_complexity 1 29 0 235 313 0 12 chr2 218467377 218467457 -32220397 + GA-rich Low_complexity Low_complexity 3 81 0 488 309 70 26 chr2 218468111 218468341 -32219513 + MIR SINE MIR 9 248 -14 25 51 0 0 chr2 218469354 218469393 -32218461 + AT_rich Low_complexity Low_complexity 1 39 0 315 65 0 0 chr2 218470395 218470441 -32217413 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 27 49 0 0 chr2 218470780 218470821 -32217033 + AT_rich Low_complexity Low_complexity 1 41 0 30 45 0 0 chr2 218470869 218470913 -32216941 + AT_rich Low_complexity Low_complexity 1 44 0 354 211 229 69 chr2 218471013 218471188 -32216666 - L2 LINE L2 0 3313 3111 1013 86 0 0 chr2 218471893 218472032 -32215822 - THE1A-int LTR MaLR -1441 139 1 2319 91 28 0 chr2 218472066 218472386 -32215468 - THE1A LTR MaLR -26 329 1 280 136 15 15 chr2 218472386 218472452 -32215402 + GA-rich Low_complexity Low_complexity 1 66 0 1552 211 20 53 chr2 218472964 218473363 -32214491 + MLT1B LTR MaLR 1 386 -4 37 52 0 0 chr2 218473791 218473849 -32214005 + AT_rich Low_complexity Low_complexity 1 58 0 313 71 54 0 chr2 218473975 218474031 -32213823 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 1263 211 36 43 chr2 218474036 218474316 -32213538 - AluJo SINE Alu -34 278 1 681 149 35 0 chr2 218475338 218475452 -32212402 - FLAM_C SINE Alu -15 118 1 221 320 13 13 chr2 218475638 218475716 -32212138 + L2 LINE L2 3004 3081 -191 25 0 0 0 chr2 218476471 218476496 -32211358 + AT_rich Low_complexity Low_complexity 1 25 0 40660 67 4 9 chr2 218477424 218483363 -32204491 - L1PA5 LINE L1 -218 5936 7 2020 124 37 0 chr2 218484379 218484677 -32203177 - AluSc SINE Alu 0 309 1 466 308 53 57 chr2 218484788 218485015 -32202839 + MIR SINE MIR 18 243 -19 21 0 0 0 chr2 218485044 218485065 -32202789 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 218485234 218485263 -32202591 + AT_rich Low_complexity Low_complexity 1 29 0 203 224 35 0 chr2 218485637 218485695 -32202159 + A-rich Low_complexity Low_complexity 1 60 0 321 297 20 30 chr2 218485873 218485974 -32201880 - MIR3 SINE MIR -10 198 99 263 216 216 14 chr2 218486798 218486946 -32200908 - L1MC5 LINE L1 -299 7662 7485 473 0 18 0 chr2 218486961 218487018 -32200836 + (TG)n Simple_repeat Simple_repeat 2 59 0 3007 194 73 30 chr2 218488331 218489204 -32198650 + MER57-int LTR ERV1 2788 3717 -1219 1953 241 57 27 chr2 218489199 218489815 -32198039 + MER57-int LTR ERV1 3576 4603 -412 * 1625 250 122 11 chr2 218489840 218490284 -32197570 + MER57-int LTR ERV1 6614 7106 -431 2378 164 30 61 chr2 218490297 218490822 -32197032 + LTR54 LTR ERV1 1 509 -1 1421 136 5 0 chr2 218490920 218491126 -32196728 + THE1B LTR MaLR 158 364 0 4482 231 54 19 chr2 218491126 218491808 -32196046 + L1M4 LINE L1 3712 4369 -1777 1375 209 10 23 chr2 218491808 218492110 -32195744 + AluJo SINE Alu 1 298 -14 4482 231 54 19 chr2 218492110 218492762 -32195092 + L1M4 LINE L1 4369 5093 -1053 21 71 0 0 chr2 218492908 218492950 -32194904 + AT_rich Low_complexity Low_complexity 1 42 0 479 259 72 24 chr2 218493866 218494032 -32193822 - MIR SINE MIR -25 237 64 340 276 54 49 chr2 218494699 218494884 -32192970 - L2 LINE L2 -10 3303 3118 216 0 0 0 chr2 218494913 218494937 -32192917 + (CAA)n Simple_repeat Simple_repeat 2 25 0 183 303 56 22 chr2 218495326 218495415 -32192439 - L2 LINE L2 -658 2656 2565 600 286 0 0 chr2 218495539 218495679 -32192175 - LTR33 LTR ERVL -359 162 23 239 315 54 0 chr2 218496715 218496807 -32191047 + MER5A DNA MER1_type 87 183 -6 23 0 0 0 chr2 218497302 218497325 -32190529 + AT_rich Low_complexity Low_complexity 1 23 0 203 308 62 77 chr2 218498377 218498650 -32189204 - L2 LINE L2 0 3313 3045 303 388 8 0 chr2 218498782 218499024 -32188830 + L1M4 LINE L1 5156 5399 -747 1258 93 11 0 chr2 218499155 218499337 -32188517 + L1PA4 LINE L1 5970 6153 -2 338 353 29 14 chr2 218499481 218499620 -32188234 - MIR SINE MIR -10 252 112 35 41 0 0 chr2 218500146 218500195 -32187659 + AT_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr2 218500404 218500429 -32187425 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr2 218501069 218501104 -32186750 + AT_rich Low_complexity Low_complexity 1 35 0 1968 108 28 7 chr2 218503919 218504207 -32183647 + AluSq SINE Alu 1 294 -19 231 36 0 0 chr2 218504207 218504235 -32183619 + (GA)n Simple_repeat Simple_repeat 1 28 0 1032 134 0 0 chr2 218504238 218504409 -32183445 + (GAAA)n Simple_repeat Simple_repeat 4 174 0 881 158 0 29 chr2 218504596 218504767 -32183087 + MER51A LTR ERV1 3 168 -466 27 0 0 0 chr2 218504775 218504802 -32183052 + AT_rich Low_complexity Low_complexity 1 27 0 576 328 28 24 chr2 218504916 218505169 -32182685 + MIR SINE MIR 9 262 0 23 54 0 0 chr2 218505899 218505936 -32181918 + AT_rich Low_complexity Low_complexity 1 37 0 215 170 21 0 chr2 218505957 218506004 -32181850 + (TA)n Simple_repeat Simple_repeat 1 48 0 220 350 137 0 chr2 218506654 218506771 -32181083 - L2 LINE L2 -260 3053 2921 755 156 8 16 chr2 218506946 218507074 -32180780 + FLAM_C SINE Alu 1 127 -16 21 36 0 0 chr2 218507381 218507409 -32180445 + AT_rich Low_complexity Low_complexity 1 28 0 433 232 55 61 chr2 218507987 218508168 -32179686 + MER104 DNA MER2_type 1 180 0 257 318 11 0 chr2 218508212 218508300 -32179554 - MIR SINE MIR 0 262 174 22 35 0 0 chr2 218508981 218509010 -32178844 + AT_rich Low_complexity Low_complexity 1 29 0 255 262 0 60 chr2 218509064 218509148 -32178706 + L2 LINE L2 3193 3271 -1 180 179 0 26 chr2 218509613 218509652 -32178202 + L2 LINE L2 3276 3313 0 1192 217 108 54 chr2 218510300 218510724 -32177130 + MLT1C LTR MaLR 21 467 0 186 43 0 0 chr2 218511517 218511540 -32176314 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3674 97 30 32 chr2 218511541 218512453 -32175401 - MER11A LTR ERVK -159 1107 1 288 145 32 32 chr2 218512465 218512527 -32175327 + MER3 DNA MER1_type 148 209 0 * 582 159 0 0 chr2 218512527 218512574 -32175280 - MER3 DNA MER1_type -162 47 1 1913 157 3 0 chr2 218512611 218512911 -32174943 + AluSx SINE Alu 1 301 -11 725 219 31 71 chr2 218512913 218513097 -32174757 - L1MC5 LINE L1 -675 7286 7096 180 0 0 0 chr2 218513097 218513117 -32174737 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 725 219 31 71 chr2 218513117 218513553 -32174301 - L1MC5 LINE L1 -865 7096 6625 1801 160 10 0 chr2 218513558 218513851 -32174003 - AluSg1 SINE Alu -9 300 5 207 0 0 0 chr2 218513858 218513881 -32173973 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1369 209 7 3 chr2 218513880 218514187 -32173667 - AluJb SINE Alu 0 308 1 1397 158 0 0 chr2 218514196 218514411 -32173443 - AluSg/x SINE Alu -9 303 89 1008 218 64 4 chr2 218514634 218514868 -32172986 + MLT1C LTR MaLR 65 312 -155 402 185 0 0 chr2 218514897 218514962 -32172892 - FRAM/FAM SINE Alu -110 66 2 676 184 14 20 chr2 218514966 218515113 -32172741 + MLT1C LTR MaLR 322 467 0 2103 81 0 14 chr2 218516053 218516184 -32171670 + AluY SINE Alu 1 132 -180 603 0 0 0 chr2 218516184 218516251 -32171603 + (TA)n Simple_repeat Simple_repeat 1 67 0 2103 81 0 14 chr2 218516251 218516435 -32171419 + AluY SINE Alu 132 312 0 29 47 0 0 chr2 218517278 218517321 -32170533 + AT_rich Low_complexity Low_complexity 1 43 0 24 0 0 0 chr2 218517606 218517630 -32170224 + AT_rich Low_complexity Low_complexity 1 24 0 333 289 147 6 chr2 218517919 218518075 -32169779 + MIR SINE MIR 85 262 0 25 0 0 0 chr2 218518152 218518177 -32169677 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 218518722 218518743 -32169111 + AT_rich Low_complexity Low_complexity 1 21 0 317 323 0 8 chr2 218519945 218520069 -32167785 - LTR33 LTR ERVL -10 511 389 506 209 9 9 chr2 218520173 218520283 -32167571 - LTR33 LTR ERVL -392 129 20 2002 123 19 3 chr2 218520619 218520927 -32166927 + AluSq SINE Alu 1 313 0 231 188 0 0 chr2 218520927 218520975 -32166879 + GA-rich Low_complexity Low_complexity 3 50 0 5925 101 14 14 chr2 218522478 218523845 -32164009 + L1PA10 LINE L1 4760 6168 0 292 359 159 0 chr2 218526005 218526200 -32161654 + MIR SINE MIR 25 250 -12 242 308 7 82 chr2 218527044 218527190 -32160664 + MIR SINE MIR 82 216 -46 180 219 0 0 chr2 218527323 218527364 -32160490 + L2 LINE L2 3273 3313 0 23 0 0 0 chr2 218527477 218527500 -32160354 + AT_rich Low_complexity Low_complexity 1 23 0 25 102 0 0 chr2 218528068 218528156 -32159698 + AT_rich Low_complexity Low_complexity 1 88 0 2366 161 22 44 chr2 218530033 218530530 -32157324 + MER66B LTR ERV1 1 486 0 220 324 21 90 chr2 218531077 218531222 -32156632 - MER91C DNA MER1_type -5 135 1 198 308 109 43 chr2 218531316 218531592 -32156262 + L2 LINE L2 2487 2780 -534 1065 300 108 10 chr2 218531614 218532004 -32155850 - LTR16C LTR ERVL 0 491 64 22 0 0 0 chr2 218532448 218532470 -32155384 + AT_rich Low_complexity Low_complexity 1 22 0 209 277 64 11 chr2 218532485 218532579 -32155275 + MIR SINE MIR 164 262 0 277 263 64 83 chr2 218532597 218532736 -32155118 - MER5A DNA MER1_type -28 161 24 510 276 0 0 chr2 218532736 218532870 -32154984 - MER94 DNA DNA 0 134 1 277 263 64 83 chr2 218532870 218532886 -32154968 - MER5A DNA MER1_type -165 24 9 21 0 0 0 chr2 218533738 218533759 -32154095 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 218534476 218534503 -32153351 + AT_rich Low_complexity Low_complexity 1 27 0 437 318 50 40 chr2 218534849 218535047 -32152807 + MIR SINE MIR 12 211 -51 229 358 53 0 chr2 218536268 218536363 -32151491 + L2 LINE L2 2688 2787 -527 272 273 131 0 chr2 218536808 218536907 -32150947 + L2 LINE L2 3142 3253 -19 2261 80 0 7 chr2 218537604 218537903 -32149951 - AluY SINE Alu -14 297 1 230 68 51 34 chr2 218538245 218538304 -32149550 + (TTTG)n Simple_repeat Simple_repeat 2 61 0 211 406 89 0 chr2 218540218 218540341 -32147513 - L2 LINE L2 -2 3270 3137 422 304 74 0 chr2 218540743 218540891 -32146963 - MIR SINE MIR 0 262 104 255 61 0 0 chr2 218540976 218541009 -32146845 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 500 278 63 29 chr2 218542208 218542413 -32145441 + MIR SINE MIR 20 231 -31 656 291 50 8 chr2 218544904 218545140 -32142714 + MIR SINE MIR 21 261 -1 1917 144 6 26 chr2 218546386 218546699 -32141155 + AluSx SINE Alu 1 307 -5 436 306 56 12 chr2 218547437 218547597 -32140257 - MIR3 SINE MIR -5 203 37 1787 144 3 41 chr2 218548672 218548992 -32138862 - AluSx SINE Alu 0 309 1 21 36 0 0 chr2 218548996 218549024 -32138830 + AT_rich Low_complexity Low_complexity 1 28 0 1282 306 118 42 chr2 218549049 218550063 -32137791 - L2 LINE L2 -84 3229 2157 1021 225 41 16 chr2 218550106 218550350 -32137504 + MLT1E1 LTR MaLR 405 654 0 34 0 0 0 chr2 218551760 218551794 -32136060 + AT_rich Low_complexity Low_complexity 1 34 0 23 68 0 0 chr2 218552978 218553022 -32134832 + AT_rich Low_complexity Low_complexity 1 44 0 1963 187 36 32 chr2 218553165 218553715 -32134139 + MLT2A2 LTR ERVL 1 554 0 1805 208 83 16 chr2 218553786 218554218 -32133636 + LOR1b LTR ERV1 1 461 0 730 186 28 7 chr2 218554246 218554391 -32133463 + FRAM SINE Alu 1 148 -28 464 347 40 50 chr2 218554421 218554966 -32132888 + L2 LINE L2 2364 2903 -411 205 273 13 27 chr2 218556319 218556469 -32131385 + (TTA)n Simple_repeat Simple_repeat 1 148 0 252 225 90 27 chr2 218556469 218556580 -32131274 - L1MB8 LINE L1 -247 5931 5814 333 274 192 34 chr2 218556609 218556817 -32131037 - L1MB8 LINE L1 -341 5780 5540 2108 99 48 3 chr2 218557606 218557899 -32129955 + AluSc SINE Alu 1 306 -3 534 368 64 20 chr2 218560676 218561114 -32126740 + L3 LINE CR1 321 777 -800 286 276 0 40 chr2 218562153 218562229 -32125625 + MIR SINE MIR 5 77 -185 228 374 41 16 chr2 218562430 218562553 -32125301 + MIR SINE MIR 17 142 -66 375 250 25 0 chr2 218562696 218562776 -32125078 + LTR52 LTR ERVL 321 402 -19 24 53 0 0 chr2 218562799 218562837 -32125017 + AT_rich Low_complexity Low_complexity 1 38 0 226 315 46 31 chr2 218563291 218563421 -32124433 + MIR SINE MIR 129 260 -2 256 376 10 0 chr2 218564093 218564194 -32123660 - MIR3 SINE MIR -53 155 54 258 32 0 0 chr2 218564722 218564753 -32123101 + (CA)n Simple_repeat Simple_repeat 2 32 0 300 264 0 14 chr2 218565011 218565083 -32122771 + L2 LINE L2 3201 3271 -1 838 235 59 15 chr2 218565378 218565582 -32122272 + MIR SINE MIR 50 262 0 390 280 28 73 chr2 218566383 218566601 -32121253 - L2 LINE L2 0 3313 3106 2088 182 44 5 chr2 218566956 218567368 -32120486 + MSTA LTR MaLR 1 428 0 285 286 22 33 chr2 218568171 218568262 -32119592 - MER5B DNA MER1_type -6 172 83 1612 64 36 0 chr2 218570307 218570527 -32117327 + L1PA7 LINE L1 5923 6150 -4 204 250 94 31 chr2 218570575 218570639 -32117215 + MIR3 SINE MIR 100 167 -41 324 300 25 25 chr2 218570795 218570915 -32116939 - MIR SINE MIR -24 238 119 186 43 0 0 chr2 218570944 218570967 -32116887 + (CAA)n Simple_repeat Simple_repeat 2 24 0 474 319 35 24 chr2 218571124 218571293 -32116561 + MIR SINE MIR 34 204 -58 23 54 0 0 chr2 218571523 218571560 -32116294 + AT_rich Low_complexity Low_complexity 1 37 0 835 175 119 6 chr2 218571623 218571800 -32116054 + MSTB LTR MaLR 1 197 -229 232 115 0 33 chr2 218571802 218571863 -32115991 + (TAAAA)n Simple_repeat Simple_repeat 1 59 0 27 29 0 0 chr2 218572107 218572141 -32115713 + AT_rich Low_complexity Low_complexity 1 34 0 1394 176 13 0 chr2 218572141 218572380 -32115474 + MSTB LTR MaLR 185 426 0 2615 38 0 10 chr2 218573210 218573523 -32114331 + AluY SINE Alu 1 310 -1 188 319 43 0 chr2 218574615 218574684 -32113170 - L2 LINE L2 -8 3305 3234 474 339 136 14 chr2 218575177 218575546 -32112308 - L2 LINE L2 -1193 2121 1708 203 184 0 0 chr2 218626022 218626060 -32061794 + (TTATA)n Simple_repeat Simple_repeat 1 38 0 590 125 0 0 chr2 218626356 218626444 -32061410 + AluJ/FLAM SINE Alu 1 88 -224 315 167 0 0 chr2 218626448 218626562 -32061292 + FLAM_A SINE Alu 64 177 0 306 212 0 0 chr2 218626562 218626628 -32061226 + AluJ/monomer SINE Alu 236 301 0 215 358 53 58 chr2 218627905 218628148 -32059706 - L2 LINE L2 -4 3268 3027 207 0 0 0 chr2 218628739 218628762 -32059092 + (TA)n Simple_repeat Simple_repeat 1 23 0 355 321 165 18 chr2 218629307 218629647 -32058207 + L2 LINE L2 2286 2675 -639 215 216 39 0 chr2 218629669 218629720 -32058134 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 810 228 8 8 chr2 218629969 218630215 -32057639 - MER33 DNA MER1_type -20 304 59 241 312 65 21 chr2 218630862 218630955 -32056899 + L2 LINE L2 3144 3240 -32 23 0 0 0 chr2 218631051 218631074 -32056780 + AT_rich Low_complexity Low_complexity 1 23 0 536 273 85 0 chr2 218631190 218631355 -32056499 - MIR SINE MIR -82 180 2 255 250 196 61 chr2 218631485 218631633 -32056221 - MIR SINE MIR -18 244 77 399 246 31 31 chr2 218632016 218632146 -32055708 - MER113 DNA MER1_type? -132 389 260 2171 139 27 33 chr2 218632358 218632724 -32055130 + THE1B LTR MaLR 1 364 0 11171 102 11 8 chr2 218632724 218634299 -32053555 + THE1B-int LTR MaLR 1 1580 0 2470 104 28 28 chr2 218634299 218634663 -32053191 + THE1B LTR MaLR 1 364 0 198 0 0 0 chr2 218635355 218635377 -32052477 + (T)n Simple_repeat Simple_repeat 1 22 0 704 279 64 0 chr2 218635905 218636124 -32051730 - L3 LINE CR1 -146 1431 1199 328 248 128 30 chr2 218636287 218636420 -32051434 + MIR SINE MIR 40 185 -77 204 326 70 23 chr2 218638092 218638178 -32049676 - L2 LINE L2 -40 3232 3143 1074 196 114 29 chr2 218638347 218638592 -32049262 - AluJo SINE Alu -4 308 43 27 0 0 0 chr2 218638771 218638798 -32049056 + AT_rich Low_complexity Low_complexity 1 27 0 436 270 119 22 chr2 218638924 218639109 -32048745 + MIR SINE MIR 48 250 -12 2508 74 3 0 chr2 218639631 218639941 -32047913 + AluY SINE Alu 1 311 0 388 339 130 23 chr2 218640347 218640654 -32047200 - L2 LINE L2 0 3313 2974 28 29 0 0 chr2 218641465 218641500 -32046354 + AT_rich Low_complexity Low_complexity 1 35 0 822 180 0 0 chr2 218642003 218642142 -32045712 - FLAM_C SINE Alu -2 141 3 31 0 0 0 chr2 218642266 218642297 -32045557 + AT_rich Low_complexity Low_complexity 1 31 0 259 225 11 22 chr2 218642495 218642584 -32045270 + (TA)n Simple_repeat Simple_repeat 2 89 0 1548 189 42 0 chr2 218642778 218643063 -32044791 - AluJo SINE Alu -7 305 9 34 72 0 0 chr2 218643075 218643144 -32044710 + AT_rich Low_complexity Low_complexity 1 69 0 21 36 0 0 chr2 218645049 218645077 -32042777 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr2 218645317 218645359 -32042495 + AT_rich Low_complexity Low_complexity 1 42 0 292 287 10 69 chr2 218646788 218646889 -32040965 - L2 LINE L2 0 3313 3219 1608 139 93 0 chr2 218647560 218647841 -32040013 - AluSx SINE Alu 0 307 3 188 280 77 56 chr2 218647847 218647990 -32039864 + L2 LINE L2 2131 2276 -1038 225 373 39 20 chr2 218648029 218648131 -32039723 + L2 LINE L2 3189 3292 -21 264 209 29 29 chr2 218648382 218648554 -32039300 + (CATATA)n Simple_repeat Simple_repeat 2 173 0 37 39 0 0 chr2 218649104 218649155 -32038699 + AT_rich Low_complexity Low_complexity 1 51 0 1898 113 3 7 chr2 218649455 218649775 -32038079 + AluSx SINE Alu 1 319 0 21 0 0 0 chr2 218650475 218650496 -32037358 + AT_rich Low_complexity Low_complexity 1 21 0 228 67 0 0 chr2 218650632 218650662 -32037192 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 4157 83 2 2 chr2 218651746 218652315 -32035539 - L1PA13 LINE L1 0 6163 5595 2088 111 13 10 chr2 218652517 218652823 -32035031 + AluSx SINE Alu 1 307 -5 1452 224 43 41 chr2 218653384 218653546 -32034308 + MLT1C LTR MaLR 1 161 -306 1004 140 91 50 chr2 218653546 218653649 -32034205 - MER30 DNA MER1_type 0 230 133 2301 78 0 0 chr2 218653649 218653942 -32033912 + AluY SINE Alu 2 294 -17 1004 140 91 50 chr2 218653942 218654059 -32033795 - MER30 DNA MER1_type -97 133 1 1452 224 43 41 chr2 218654059 218654339 -32033515 + MLT1C LTR MaLR 161 444 -23 777 275 62 56 chr2 218654548 218654872 -32032982 + MLT1J LTR MaLR 28 353 -158 21 57 0 0 chr2 218655305 218655340 -32032514 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 218655565 218655586 -32032268 + AT_rich Low_complexity Low_complexity 1 21 0 215 100 0 50 chr2 218655744 218655784 -32032070 + (TATAA)n Simple_repeat Simple_repeat 5 42 0 617 304 76 33 chr2 218657454 218657757 -32030097 + L2 LINE L2 2506 2821 -493 299 236 0 0 chr2 218657748 218657803 -32030051 + L2 LINE L2 3014 3068 -245 * 4456 155 38 23 chr2 218657827 218658654 -32029200 + ERVL-B1 LTR ERVL 4918 5756 -8 1924 218 58 26 chr2 218658655 218659082 -32028772 + MLT2B1 LTR ERVL 1 441 -79 222 254 0 32 chr2 218659111 218659174 -32028680 + (TATATG)n Simple_repeat Simple_repeat 4 64 0 793 186 72 5 chr2 218659178 218659223 -32028631 - Ricksha DNA DNA -858 396 339 1199 158 19 0 chr2 218659223 218659432 -32028422 - ERVL LTR ERVL -1 5763 5551 243 111 0 0 chr2 218659437 218659473 -32028381 + MLT2B1 LTR ERVL 429 464 0 464 277 36 7 chr2 218659486 218659623 -32028231 + L2 LINE L2 2670 2810 -504 * 479 269 112 101 chr2 218659622 218659908 -32027946 + L2 LINE L2 3008 3296 -17 579 205 51 0 chr2 218660020 218660137 -32027717 + FLAM_C SINE Alu 1 123 -20 23 33 0 0 chr2 218660139 218660169 -32027685 + AT_rich Low_complexity Low_complexity 1 30 0 321 298 32 7 chr2 218660180 218660285 -32027569 + MIR SINE MIR 34 146 -62 345 313 118 10 chr2 218660469 218660664 -32027190 - L1M4 LINE L1 -2187 3959 3744 2423 64 0 10 chr2 218661009 218661322 -32026532 - AluY SINE Alu -1 310 1 292 419 31 5 chr2 218662827 218663018 -32024836 - MER91A DNA MER1_type 0 196 1 35 0 0 0 chr2 218663329 218663364 -32024490 + AT_rich Low_complexity Low_complexity 1 35 0 4554 94 8 0 chr2 218663510 218664145 -32023709 - L1PA13 LINE L1 -4 6159 5520 430 141 28 0 chr2 218664703 218664774 -32023080 + MSTC LTR MaLR 1 73 -355 1043 198 19 10 chr2 218664791 218664998 -32022856 + MSTC LTR MaLR 220 428 0 186 189 0 0 chr2 218665625 218665662 -32022192 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 218666515 218666536 -32021318 + AT_rich Low_complexity Low_complexity 1 21 0 317 93 41 31 chr2 218666688 218666785 -32021069 + (TA)n Simple_repeat Simple_repeat 2 99 0 24 53 0 0 chr2 218666839 218666877 -32020977 + AT_rich Low_complexity Low_complexity 1 38 0 22 70 0 0 chr2 218667039 218667082 -32020772 + AT_rich Low_complexity Low_complexity 1 43 0 396 0 0 0 chr2 218667183 218667227 -32020627 + (TG)n Simple_repeat Simple_repeat 2 45 0 933 271 112 52 chr2 218667882 218668420 -32019434 + L2 LINE L2 2340 2909 -405 453 188 139 0 chr2 218668419 218668520 -32019334 - MER5C DNA MER1_type -206 118 4 * 629 203 227 0 chr2 218668533 218668696 -32019158 + L2 LINE L2 3114 3313 0 180 152 0 0 chr2 218668696 218668729 -32019125 + (TGGA)n Simple_repeat Simple_repeat 2 34 0 276 367 25 0 chr2 218668799 218668919 -32018935 - MIR3 SINE MIR -15 193 71 229 82 41 0 chr2 218668925 218668974 -32018880 + (TA)n Simple_repeat Simple_repeat 2 52 0 2176 119 0 10 chr2 218670074 218670377 -32017477 + AluSg SINE Alu 1 300 -10 216 0 0 0 chr2 218671903 218671927 -32015927 + (A)n Simple_repeat Simple_repeat 1 24 0 1620 155 3 51 chr2 218673162 218673478 -32014376 - AluJb SINE Alu -7 305 5 193 265 20 0 chr2 218673576 218673625 -32014229 + MIR3 SINE MIR 147 196 -12 28 22 0 22 chr2 218674822 218674852 -32013002 + AT_rich Low_complexity Low_complexity 1 31 -14 4359 14 4 0 chr2 218674852 218675354 -32012500 + L1PA3 LINE L1 5652 6155 0 28 22 0 22 chr2 218675354 218675369 -32012485 + AT_rich Low_complexity Low_complexity 31 45 0 353 342 9 18 chr2 218676077 218676188 -32011666 + L2 LINE L2 3151 3260 -12 1653 224 63 18 chr2 218676247 218676693 -32011161 - MLT1C LTR MaLR -1 466 1 26 0 0 0 chr2 218677426 218677452 -32010402 + AT_rich Low_complexity Low_complexity 1 26 0 329 194 29 129 chr2 218677706 218677784 -32010070 - L1ME4a LINE L1 -5 6116 6056 1880 118 0 0 chr2 218677784 218678039 -32009815 + AluSx SINE Alu 1 255 -57 329 194 29 129 chr2 218678039 218678099 -32009755 - L1ME4a LINE L1 -65 6056 5992 581 312 65 28 chr2 218678328 218678575 -32009279 + MIR SINE MIR 5 260 -2 707 322 62 14 chr2 218678623 218678993 -32008861 + L2 LINE L2 2033 2420 -894 382 244 12 12 chr2 218679028 218679114 -32008740 + MLT1H LTR MaLR 135 220 -329 266 240 125 10 chr2 218679212 218679316 -32008538 + MLT1H LTR MaLR 292 533 -2 526 127 0 0 chr2 218679786 218679865 -32007989 - MADE1 DNA Mariner -1 79 1 34 0 0 0 chr2 218681456 218681490 -32006364 + AT_rich Low_complexity Low_complexity 1 34 0 590 283 0 53 chr2 218681589 218681776 -32006078 + MER5A DNA MER1_type 7 183 -6 1866 195 58 8 chr2 218681779 218682262 -32005592 + Charlie4a DNA MER1_type 2 508 0 882 318 140 9 chr2 218682886 218683421 -32004433 + L2 LINE L2 2367 2971 -343 294 120 20 0 chr2 218683921 218683971 -32003883 + L2 LINE L2 3263 3313 0 540 284 104 5 chr2 218684216 218684417 -32003437 - MIR SINE MIR 0 262 42 384 243 78 29 chr2 218685330 218685433 -32002421 + MLT1F LTR MaLR 416 510 -32 1964 241 67 24 chr2 218688112 218688751 -31999103 + L1ME2 LINE L1 5488 6154 -10 1645 179 3 33 chr2 218689972 218690279 -31997575 - AluJo SINE Alu -14 298 1 826 166 170 52 chr2 218690350 218690639 -31997215 + MER33 DNA MER1_type 1 323 -1 23 0 0 0 chr2 218690662 218690685 -31997169 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 218690770 218690794 -31997060 + AT_rich Low_complexity Low_complexity 1 24 0 686 219 28 22 chr2 218691404 218691582 -31996272 - MER96B DNA MER1_type? -238 179 1 266 327 19 10 chr2 218691609 218691713 -31996141 + MLT1L LTR MaLR 101 205 -410 246 326 38 23 chr2 218691905 218692037 -31995817 + MLT1J LTR MaLR 378 511 0 261 340 117 0 chr2 218692280 218692383 -31995471 - L2 LINE L2 -9 3263 3149 6482 74 8 5 chr2 218692613 218694257 -31993597 + L1PA8A LINE L1 4490 6131 0 224 345 102 65 chr2 218694654 218695037 -31992817 - L2 LINE L2 -45 3227 2831 383 329 69 36 chr2 218695101 218695521 -31992333 + L1MC/D LINE L1 5384 5817 -1991 1609 173 0 0 chr2 218695532 218695792 -31992062 + L1PA11 LINE L1 4835 5094 -1052 1867 172 27 21 chr2 218695794 218696167 -31991687 + THE1C LTR MaLR 1 375 0 9047 131 59 20 chr2 218696167 218697688 -31990166 + THE1C-int LTR MaLR 1 1580 0 1761 174 55 17 chr2 218697688 218698049 -31989805 + THE1C LTR MaLR 1 375 0 5796 123 12 18 chr2 218698049 218699118 -31988736 + L1PA11 LINE L1 5092 6150 -24 546 300 241 10 chr2 218699281 218699671 -31988183 - L2 LINE L2 0 3313 2834 276 282 97 10 chr2 218701345 218701448 -31986406 + L2 LINE L2 3201 3312 -1 298 305 20 46 chr2 218701992 218702143 -31985711 - MIR3 SINE MIR -32 176 30 331 341 16 16 chr2 218702203 218702332 -31985522 + L2 LINE L2 2713 2841 -473 1557 227 19 27 chr2 218702405 218702780 -31985074 + MLT1A2 LTR MaLR 1 372 -2 409 386 14 71 chr2 218702794 218703089 -31984765 + L2 LINE L2 2970 3247 -25 22 56 0 0 chr2 218703535 218703571 -31984283 + AT_rich Low_complexity Low_complexity 1 36 0 312 328 98 92 chr2 218703861 218704112 -31983742 - L2 LINE L2 -37 3235 2987 249 109 0 0 chr2 218704112 218704158 -31983696 + (TG)n Simple_repeat Simple_repeat 2 47 0 312 328 98 92 chr2 218704158 218704690 -31983164 - L2 LINE L2 -285 2987 2447 601 328 38 17 chr2 218707126 218707361 -31980493 - MIR SINE MIR -22 240 1 772 308 32 0 chr2 218708276 218708523 -31979331 - MIR SINE MIR 0 262 8 367 332 15 6 chr2 218708525 218708698 -31979156 - L1MC/D LINE L1 -362 5759 5602 435 255 97 35 chr2 218708783 218708928 -31978926 - MER63A DNA MER1_type 0 210 57 206 62 31 0 chr2 218708930 218708962 -31978892 + (TTTTG)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr2 218709235 218709257 -31978597 + AT_rich Low_complexity Low_complexity 1 22 0 1931 165 0 3 chr2 218711189 218711498 -31976356 - AluSx SINE Alu -4 308 1 276 259 111 12 chr2 218712335 218712416 -31975438 - L3b LINE CR1 -18 1565 1477 910 60 17 0 chr2 218713481 218713628 -31974226 + L1PA2 LINE L1 6024 6172 0 190 354 122 0 chr2 218714170 218714317 -31973537 + L2 LINE L2 2302 2466 -848 702 123 23 0 chr2 218714361 218714491 -31973363 + CT-rich Low_complexity Low_complexity 2 134 0 257 292 102 112 chr2 218714492 218714959 -31972895 + L2 LINE L2 2555 3068 -204 1247 146 20 65 chr2 218715192 218715438 -31972416 - MER46A DNA MER2_type 0 236 2 2461 61 0 3 chr2 218716432 218716742 -31971112 + AluY SINE Alu 1 309 -2 711 220 73 11 chr2 218717318 218717495 -31970359 - MER5A DNA MER1_type -1 188 1 386 101 107 15 chr2 218717970 218718300 -31969554 + (TA)n Simple_repeat Simple_repeat 1 360 0 203 73 103 0 chr2 218718312 218718380 -31969474 + (TA)n Simple_repeat Simple_repeat 1 75 0 252 0 0 0 chr2 218720469 218720497 -31967357 + (CA)n Simple_repeat Simple_repeat 2 29 0 23 68 0 0 chr2 218720875 218720919 -31966935 + AT_rich Low_complexity Low_complexity 1 44 0 37 16 0 48 chr2 218721612 218721675 -31966179 + AT_rich Low_complexity Low_complexity 1 60 0 2487 151 20 27 chr2 218722216 218722665 -31965189 - Tigger2 DNA MER2_type 0 2718 2273 411 203 0 0 chr2 218722655 218722724 -31965130 - Tigger2 DNA MER2_type -2649 69 1 * 233 211 119 37 chr2 218723026 218723135 -31964719 - MER46C DNA MER2_type -21 317 200 381 73 0 171 chr2 218723140 218723222 -31964632 + LOR1a LTR ERV1 1 68 -429 441 190 8 58 chr2 218723242 218723363 -31964491 + LOR1a LTR ERV1 317 431 -66 615 281 10 15 chr2 218723400 218723599 -31964255 - MER46C DNA MER2_type -138 200 3 381 305 37 30 chr2 218723606 218723770 -31964084 - MIR SINE MIR -70 192 28 2932 172 70 40 chr2 218724375 218724766 -31963088 - L1MB3 LINE L1 0 6183 5762 1773 126 14 41 chr2 218724766 218725060 -31962794 - AluSx SINE Alu -26 286 1 2932 172 70 40 chr2 218725060 218725342 -31962512 - L1MB3 LINE L1 -421 5762 5490 21 0 0 0 chr2 218725570 218725591 -31962263 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 218725950 218725972 -31961882 + AT_rich Low_complexity Low_complexity 1 22 0 336 250 0 0 chr2 218726689 218726765 -31961089 + MIR SINE MIR 152 227 -35 21 0 0 0 chr2 218728345 218728366 -31959488 + AT_rich Low_complexity Low_complexity 1 21 0 328 167 61 15 chr2 218728439 218728505 -31959349 - L2 LINE L2 -1 3312 3244 1726 154 39 3 chr2 218728526 218728812 -31959042 - AluJo SINE Alu -10 302 7 997 304 63 11 chr2 218729188 218729775 -31958079 - L2 LINE L2 -17 3296 2669 1080 174 6 0 chr2 218730593 218730771 -31957083 + AluSx SINE Alu 1 179 -133 1725 103 4 0 chr2 218730871 218731104 -31956750 - AluSp SINE Alu -79 234 1 302 24 48 0 chr2 218731110 218731152 -31956702 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 1334 143 5 0 chr2 218731152 218731355 -31956499 - AluSg/x SINE Alu -17 295 92 23 54 0 0 chr2 218731490 218731527 -31956327 + AT_rich Low_complexity Low_complexity 1 37 0 250 214 18 0 chr2 218732174 218732230 -31955624 + L2 LINE L2 3185 3241 -31 339 253 139 51 chr2 218732280 218732438 -31955416 + MIR SINE MIR 33 204 -58 25 75 0 0 chr2 218732452 218732505 -31955349 + AT_rich Low_complexity Low_complexity 1 53 0 2390 50 3 7 chr2 218732573 218732874 -31954980 - AluY SINE Alu -11 300 1 256 300 55 18 chr2 218733685 218733795 -31954059 + MIR SINE MIR 63 176 -86 22 0 0 0 chr2 218733822 218733844 -31954010 + AT_rich Low_complexity Low_complexity 1 22 0 22 80 0 0 chr2 218733902 218733952 -31953902 + AT_rich Low_complexity Low_complexity 1 50 0 301 350 173 4 chr2 218734174 218734400 -31953454 + L2 LINE L2 2910 3173 -140 753 154 74 7 chr2 218735577 218735726 -31952128 + MLT1B LTR MaLR 1 159 -231 21 0 0 0 chr2 218736488 218736509 -31951345 + AT_rich Low_complexity Low_complexity 1 21 0 399 334 101 39 chr2 218736745 218737230 -31950624 + L2 LINE L2 2150 2664 -650 25 31 0 0 chr2 218737585 218737617 -31950237 + AT_rich Low_complexity Low_complexity 1 32 0 4797 78 26 2 chr2 218737617 218738259 -31949595 - L1PA8A LINE L1 -29 6102 5445 * 6545 116 9 5 chr2 218738255 218739351 -31948503 + L1PA8A LINE L1 4346 5442 -689 993 234 0 0 chr2 218740185 218740386 -31947468 + MER3 DNA MER1_type 9 209 0 295 222 0 0 chr2 218740343 218740397 -31947457 - MER3 DNA MER1_type -119 90 37 * 2143 245 84 32 chr2 218740480 218741239 -31946615 + L1ME3A LINE L1 5370 6168 -2 211 35 0 0 chr2 218743367 218743396 -31944458 - L2 LINE L2 -1 3312 3284 313 237 66 0 chr2 218743809 218743885 -31943969 + MIR SINE MIR 168 248 -14 249 83 0 0 chr2 218744392 218744428 -31943426 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 279 320 188 0 chr2 218745085 218745213 -31942641 - MIR3 SINE MIR 0 208 57 32 57 0 0 chr2 218745406 218745459 -31942395 + AT_rich Low_complexity Low_complexity 1 53 0 247 297 44 11 chr2 218746637 218746728 -31941126 + L2 LINE L2 2932 3025 -247 21 0 0 0 chr2 218747893 218747914 -31939940 + AT_rich Low_complexity Low_complexity 1 21 0 192 314 0 0 chr2 218747972 218748023 -31939831 + L2 LINE L2 3259 3309 -4 586 286 115 13 chr2 218748413 218748647 -31939207 + L2 LINE L2 1836 2093 -1221 202 329 113 59 chr2 218748633 218748855 -31938999 + L2 LINE L2 3004 3237 -76 * 240 150 0 75 chr2 218749086 218749166 -31938688 + MER53 DNA DNA 109 182 -7 * 380 183 0 0 chr2 218749111 218749182 -31938672 - MER53 DNA DNA -118 71 1 24 0 0 0 chr2 218749318 218749342 -31938512 + AT_rich Low_complexity Low_complexity 1 24 0 209 153 0 17 chr2 218749356 218749415 -31938439 + (TA)n Simple_repeat Simple_repeat 2 59 0 26 0 0 0 chr2 218749711 218749737 -31938117 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr2 218750879 218750909 -31936945 + AT_rich Low_complexity Low_complexity 1 30 0 42 71 0 0 chr2 218751601 218751685 -31936169 + AT_rich Low_complexity Low_complexity 1 84 0 2106 223 65 83 chr2 218751800 218752460 -31935394 + MLT1E1 LTR MaLR 7 654 0 2014 146 3 0 chr2 218752952 218753247 -31934607 + AluSx SINE Alu 3 298 -14 317 221 15 0 chr2 218754989 218755057 -31932797 + L1MC4a LINE L1 6522 6590 -1218 278 362 86 30 chr2 218755367 218755916 -31931938 - L2 LINE L2 -298 2974 2359 2135 128 7 0 chr2 218755990 218756288 -31931566 + AluSx SINE Alu 2 301 -11 509 239 63 44 chr2 218758003 218758162 -31929692 + MIR SINE MIR 43 204 -58 2117 112 0 0 chr2 218758409 218758694 -31929160 - AluY SINE Alu -26 285 1 16147 101 8 1 chr2 218759945 218763122 -31924732 - L1PA7 LINE L1 0 6469 3300 9989 110 5 1 chr2 218763123 218764527 -31923327 - L1PA7 LINE L1 -5051 1410 1 26 30 0 0 chr2 218764588 218764621 -31923233 + AT_rich Low_complexity Low_complexity 1 33 0 191 309 55 102 chr2 218764923 218765035 -31922819 + MIR SINE MIR 6 107 -155 1356 201 41 27 chr2 218765035 218765329 -31922525 - AluJo SINE Alu -14 298 1 191 309 55 102 chr2 218765329 218765431 -31922423 + MIR SINE MIR 107 212 -50 440 264 143 28 chr2 218766165 218766347 -31921507 + MER34 LTR ERV1 1 203 -339 1978 103 47 23 chr2 218766354 218766654 -31921200 + AluSg SINE Alu 4 310 0 678 244 106 21 chr2 218766688 218766951 -31920903 + MER39 LTR ERV1 417 585 0 940 159 0 0 chr2 218767116 218767273 -31920581 + FRAM SINE Alu 20 176 0 22 35 0 0 chr2 218769171 218769200 -31918654 + AT_rich Low_complexity Low_complexity 1 29 0 677 196 169 27 chr2 218770833 218771017 -31916837 - MIR SINE MIR -5 257 48 225 333 44 35 chr2 218772007 218772121 -31915733 + L3b LINE CR1 1444 1558 -25 214 297 47 0 chr2 218772912 218772976 -31914878 + MIR3 SINE MIR 118 184 -24 1989 148 0 0 chr2 218773668 218773972 -31913882 + AluSx SINE Alu 1 304 -8 38 22 0 0 chr2 218774106 218774151 -31913703 + AT_rich Low_complexity Low_complexity 1 45 0 222 240 0 0 chr2 218775333 218775383 -31912471 + (TA)n Simple_repeat Simple_repeat 1 50 0 424 307 7 22 chr2 218777363 218777500 -31910354 - L2 LINE L2 0 3313 3179 1482 261 298 15 chr2 218777600 218778389 -31909465 - L2 LINE L2 -676 2638 1627 257 337 0 43 chr2 218778398 218778490 -31909364 - L2 LINE L2 -1789 1525 1438 25 0 0 0 chr2 218778964 218778989 -31908865 + AT_rich Low_complexity Low_complexity 1 25 0 492 270 157 0 chr2 218779145 218779304 -31908550 - MER5A DNA MER1_type 0 189 6 1867 175 26 12 chr2 218779415 218779757 -31908097 - MER7A DNA MER2_type -1 345 1 21 0 0 0 chr2 218779757 218779778 -31908076 + AT_rich Low_complexity Low_complexity 1 21 0 876 179 75 92 chr2 218781191 218781431 -31906423 - MER46A DNA MER2_type 0 236 1 1607 159 0 50 chr2 218781494 218781796 -31906058 - AluJo SINE Alu -23 289 3 318 339 139 0 chr2 218782222 218782402 -31905452 - MIR SINE MIR -10 252 48 1612 92 75 0 chr2 218782583 218782822 -31905032 - L1PA16 LINE L1 -9 6157 5901 22 58 0 43 chr2 218783773 218783842 -31904012 + AT_rich Low_complexity Low_complexity 1 66 0 21 36 0 0 chr2 218784165 218784193 -31903661 + AT_rich Low_complexity Low_complexity 1 28 0 44 35 0 0 chr2 218784262 218784320 -31903534 + AT_rich Low_complexity Low_complexity 1 58 0 2291 113 3 0 chr2 218785452 218785763 -31902091 + AluSx SINE Alu 1 312 0 2289 92 0 0 chr2 218786201 218786496 -31901358 + AluSx SINE Alu 7 301 -11 259 350 140 25 chr2 218786675 218786832 -31901022 + MIR3 SINE MIR 30 204 -4 966 229 44 12 chr2 218787525 218787978 -31899876 - MER69 DNA AcHobo -16 2510 2011 313 169 0 17 chr2 218787978 218788037 -31899817 - MER69 DNA AcHobo -674 552 495 376 305 57 14 chr2 218788109 218788250 -31899604 - MER69 DNA AcHobo -1012 214 68 1577 216 47 32 chr2 218788614 218789016 -31898838 + MLT1C LTR MaLR 60 467 0 22 70 0 0 chr2 218789292 218789335 -31898519 + AT_rich Low_complexity Low_complexity 1 43 0 33 0 0 0 chr2 218789531 218789564 -31898290 + AT_rich Low_complexity Low_complexity 1 33 0 31 44 0 0 chr2 218790302 218790347 -31897507 + AT_rich Low_complexity Low_complexity 1 45 0 1610 40 0 0 chr2 218793263 218793462 -31894392 - L1PA4 LINE L1 0 6155 5957 21 0 0 0 chr2 218794101 218794122 -31893732 + AT_rich Low_complexity Low_complexity 1 21 0 902 258 18 5 chr2 218794238 218794459 -31893395 - MER58A DNA MER1_type 0 224 1 815 269 96 84 chr2 218796153 218796715 -31891139 + MLT1G LTR MaLR 16 584 -6 182 333 154 35 chr2 218796718 218796919 -31890935 + L2 LINE L2 3088 3312 -1 21 36 0 0 chr2 218797810 218797838 -31890016 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 218797921 218797944 -31889910 + AT_rich Low_complexity Low_complexity 1 23 0 396 291 95 70 chr2 218797984 218798207 -31889647 + MLT1J2 LTR MaLR 15 239 -170 32 26 0 0 chr2 218798567 218798606 -31889248 + AT_rich Low_complexity Low_complexity 1 39 0 229 289 74 52 chr2 218799126 218799261 -31888593 - MIR SINE MIR -3 259 122 397 264 101 20 chr2 218799394 218799542 -31888312 - MIR SINE MIR -55 207 48 1358 144 68 0 chr2 218799552 218799788 -31888066 - Tigger2 DNA MER2_type -16 2702 2451 3880 150 3 8 chr2 218799848 218800480 -31887374 - Tigger2 DNA MER2_type -1974 744 116 6046 49 0 0 chr2 218800480 218801220 -31886634 - L1PA7 LINE L1 -43 6111 5372 2626 96 0 0 chr2 218801219 218801585 -31886269 + L1P LINE L1 1865 2230 -3916 * 576 197 82 20 chr2 218801586 218801733 -31886121 - Tigger2 DNA MER2_type -2561 157 2 221 320 80 0 chr2 218803110 218803185 -31884669 + L2 LINE L2 3154 3234 -38 24 32 0 0 chr2 218804767 218804798 -31883056 + AT_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr2 218805747 218805777 -31882077 + AT_rich Low_complexity Low_complexity 1 30 0 362 323 102 21 chr2 218806461 218806647 -31881207 - MIR3 SINE MIR -6 202 2 22 0 0 0 chr2 218807653 218807675 -31880179 + AT_rich Low_complexity Low_complexity 1 22 0 446 312 7 28 chr2 218807859 218808000 -31879854 - MIR3 SINE MIR -27 181 44 201 250 0 19 chr2 218809734 218809786 -31878068 + (TG)n Simple_repeat Simple_repeat 2 52 0 292 198 188 10 chr2 218811249 218811345 -31876509 + MIR SINE MIR 99 211 -51 1519 184 6 32 chr2 218811348 218811664 -31876190 - AluJb SINE Alu -4 308 1 372 353 53 12 chr2 218811910 218812080 -31875774 + MER5B DNA MER1_type 2 178 0 304 225 0 28 chr2 218812638 218812709 -31875145 - MIR SINE MIR -46 216 148 191 262 179 0 chr2 218814976 218815060 -31872794 + MIR SINE MIR 99 197 -65 1713 156 6 32 chr2 218815076 218815391 -31872463 - AluJb SINE Alu -5 307 1 1836 162 24 18 chr2 218815460 218815788 -31872066 + MER83B LTR ERV1 47 376 -2 2165 113 38 9 chr2 218816211 218816556 -31871298 + L1PA13 LINE L1 5809 6163 0 384 264 33 60 chr2 218816558 218816740 -31871114 + MLT1K LTR MaLR 380 556 -32 1644 177 42 12 chr2 218816898 218817231 -31870623 + MER61A LTR ERV1 1 343 0 221 303 179 19 chr2 218818923 218819085 -31868769 - MIR3 SINE MIR -1 207 20 204 40 0 0 chr2 218819145 218819170 -31868684 + (TG)n Simple_repeat Simple_repeat 1 25 0 183 333 61 53 chr2 218819266 218819380 -31868474 - L2 LINE L2 -12 3301 3187 215 255 20 0 chr2 218820112 218820163 -31867691 + L2 LINE L2 3216 3267 -5 382 316 57 28 chr2 218820741 218820918 -31866936 - MIR3 SINE MIR -25 183 2 23 54 0 0 chr2 218821753 218821790 -31866064 + AT_rich Low_complexity Low_complexity 1 37 0 2166 140 0 0 chr2 218822047 218822355 -31865499 + AluSx SINE Alu 1 308 -4 354 371 8 8 chr2 218824041 218824165 -31863689 + MIR SINE MIR 1 124 -138 268 265 82 54 chr2 218825080 218825227 -31862627 + LTR33 LTR ERVL 33 183 -338 255 324 0 0 chr2 218825243 218825314 -31862540 + MER96 DNA MER1_type? 2 72 -103 486 266 7 52 chr2 218827495 218827649 -31860205 - MIR SINE MIR 0 262 116 214 308 46 0 chr2 218827991 218828056 -31859798 - L2 LINE L2 0 3272 3205 289 333 11 0 chr2 218829945 218830032 -31857822 - L2 LINE L2 -1 3271 3184 394 277 30 0 chr2 218830542 218830643 -31857211 + MIR SINE MIR 63 166 -96 315 286 18 18 chr2 218831382 218831494 -31856360 + GA-rich Low_complexity Low_complexity 3 114 0 193 210 32 0 chr2 218833348 218833410 -31854444 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 22 0 0 0 chr2 218833537 218833559 -31854295 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 218835286 218835310 -31852544 + AT_rich Low_complexity Low_complexity 1 24 0 530 345 11 11 chr2 218835506 218835697 -31852157 + MIR3 SINE MIR 16 206 -2 202 395 37 0 chr2 218837787 218837868 -31849986 - L2 LINE L2 -4 3309 3226 315 309 26 66 chr2 218837873 218838025 -31849829 + MIR SINE MIR 117 262 0 22 56 0 0 chr2 218838334 218838370 -31849484 + AT_rich Low_complexity Low_complexity 1 36 0 327 49 0 0 chr2 218839048 218839089 -31848765 + (TG)n Simple_repeat Simple_repeat 2 42 0 637 196 211 5 chr2 218839276 218839485 -31848369 - MER33 DNA MER1_type -46 278 27 226 319 111 0 chr2 218839534 218839606 -31848248 + L2 LINE L2 3230 3309 -4 211 264 0 35 chr2 218839722 218839809 -31848045 + A-rich Low_complexity Low_complexity 2 85 0 21 0 0 0 chr2 218843575 218843596 -31844258 + AT_rich Low_complexity Low_complexity 1 21 0 210 283 0 17 chr2 218843825 218843885 -31843969 + (CA)n Simple_repeat Simple_repeat 2 60 0 494 143 36 36 chr2 218844988 218845100 -31842754 + L1MB7 LINE L1 6073 6184 0 1047 200 41 41 chr2 218845847 218846092 -31841762 + AluJo SINE Alu 67 311 -1 361 325 68 6 chr2 218846605 218846768 -31841086 + MIR SINE MIR 77 249 -13 188 165 0 0 chr2 218847904 218847947 -31839907 + MIR SINE MIR 71 114 -94 184 339 0 0 chr2 218848897 218848953 -31838901 + L2 LINE L2 3258 3313 0 190 267 40 27 chr2 218849007 218849082 -31838772 + L2 LINE L2 1904 1979 -1335 415 260 32 8 chr2 218849274 218849397 -31838457 - L1ME3A LINE L1 -19 6151 6026 397 326 71 22 chr2 218849895 218850079 -31837775 - MIR3 SINE MIR -3 205 13 482 286 21 7 chr2 218850332 218850472 -31837382 - MIR SINE MIR -74 188 47 203 250 0 0 chr2 218850785 218850829 -31837025 + GA-rich Low_complexity Low_complexity 4 47 0 515 272 84 31 chr2 218851268 218851529 -31836325 - L3 LINE CR1 -51 1526 1252 211 203 0 43 chr2 218851625 218851694 -31836160 + T-rich Low_complexity Low_complexity 3 68 0 224 230 103 87 chr2 218853031 218853157 -31834697 + MIR SINE MIR 135 262 0 23 0 0 0 chr2 218853230 218853253 -31834601 + AT_rich Low_complexity Low_complexity 1 23 0 451 248 75 8 chr2 218853412 218853545 -31834309 + MIR SINE MIR 121 262 0 621 293 63 11 chr2 218853568 218853759 -31834095 - MIR SINE MIR -40 222 22 406 246 70 7 chr2 218854087 218854229 -31833625 + L1MB7 LINE L1 6031 6181 -3 953 304 89 69 chr2 218854344 218854893 -31832961 - MLT1H1 LTR MaLR -23 532 13 350 309 91 12 chr2 218855895 218856060 -31831794 - MER5B DNA MER1_type 0 178 1 202 374 150 21 chr2 218856060 218856391 -31831463 - L3 LINE CR1 -840 737 364 1432 195 20 3 chr2 218856690 218856987 -31830867 + AluJo SINE Alu 1 302 -10 219 69 0 0 chr2 218857413 218857442 -31830412 + (TA)n Simple_repeat Simple_repeat 1 29 0 1845 132 51 68 chr2 218858411 218858781 -31829073 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr2 218858908 218858936 -31828918 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 218859728 218859749 -31828105 + AT_rich Low_complexity Low_complexity 1 21 0 1616 184 0 48 chr2 218859751 218860060 -31827794 + AluJb SINE Alu 1 294 -18 183 280 20 0 chr2 218860249 218860299 -31827555 + L2 LINE L2 3221 3271 -1 268 248 76 32 chr2 218862474 218862567 -31825287 - MER5A DNA MER1_type -80 109 4 377 241 69 75 chr2 218863115 218863289 -31824565 - MER5A DNA MER1_type -9 180 8 345 306 28 0 chr2 218863516 218863624 -31824230 + MER94 DNA DNA 4 114 -20 2568 66 23 3 chr2 218864593 218864941 -31822913 - L1PA10 LINE L1 -1 6167 5813 791 208 45 0 chr2 218865629 218865783 -31822071 - AluJb SINE Alu -14 298 138 3068 132 18 53 chr2 218865848 218866394 -31821460 - MER1A DNA MER1_type 0 527 1 21 0 0 0 chr2 218866628 218866649 -31821205 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr2 218866797 218866831 -31821023 + AT_rich Low_complexity Low_complexity 1 34 0 1040 193 0 26 chr2 218867562 218867754 -31820100 + AluJo SINE Alu 1 187 -125 2417 104 52 3 chr2 218867809 218868156 -31819698 + THE1B LTR MaLR 1 364 0 196 301 24 24 chr2 218868636 218868719 -31819135 - L3 LINE CR1 -858 719 637 1070 177 9 19 chr2 218869790 218870005 -31817849 - MER20 DNA MER1_type -4 215 3 354 169 0 0 chr2 218870048 218870113 -31817741 + (TG)n Simple_repeat Simple_repeat 2 66 0 495 298 29 90 chr2 218870347 218870565 -31817289 + MIR SINE MIR 1 200 -62 2325 57 0 17 chr2 218870565 218870863 -31816991 + AluY SINE Alu 1 293 -18 495 298 29 90 chr2 218870863 218870923 -31816931 + MIR SINE MIR 200 262 0 436 211 53 11 chr2 218870956 218871051 -31816803 + MER20 DNA MER1_type 4 102 -117 31 82 0 0 chr2 218872080 218872153 -31815701 + AT_rich Low_complexity Low_complexity 1 73 0 962 168 114 41 chr2 218873136 218873356 -31814498 - MER46A DNA MER2_type 0 236 1 24 0 0 0 chr2 218873666 218873690 -31814164 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 218874167 218874202 -31813652 + AT_rich Low_complexity Low_complexity 1 35 0 549 233 83 44 chr2 218874793 218874873 -31812981 - MER3 DNA MER1_type -18 191 116 315 0 0 0 chr2 218874873 218874908 -31812946 + (CA)n Simple_repeat Simple_repeat 1 35 0 549 233 83 44 chr2 218874908 218875007 -31812847 - MER3 DNA MER1_type -93 116 5 509 279 95 56 chr2 218875033 218875520 -31812334 - MLT1J LTR MaLR -2 509 1 1832 161 2 106 chr2 218876582 218877017 -31810837 + MLT1B LTR MaLR 1 390 0 578 232 22 7 chr2 218877149 218877287 -31810567 - MER3 DNA MER1_type -2 207 68 2570 158 2 0 chr2 218877493 218877924 -31809930 + L1PA15 LINE L1 5734 6165 0 2125 115 0 0 chr2 218878171 218878480 -31809374 + AluSq SINE Alu 1 309 0 439 205 60 6 chr2 218878896 218879062 -31808792 + (TA)n Simple_repeat Simple_repeat 1 175 0 252 296 56 19 chr2 218879400 218879508 -31808346 + MLT1J LTR MaLR 140 251 -260 258 270 54 0 chr2 218879555 218879629 -31808225 + MLT1I LTR MaLR 277 354 -55 180 275 43 43 chr2 218880500 218880569 -31807285 - L2 LINE L2 -43 3229 3161 401 183 21 0 chr2 218881336 218881429 -31806425 + (TATG)n Simple_repeat Simple_repeat 2 96 0 26 0 0 0 chr2 218883021 218883047 -31804807 + AT_rich Low_complexity Low_complexity 1 26 0 204 97 0 0 chr2 218884852 218884883 -31802971 + (TA)n Simple_repeat Simple_repeat 1 31 0 229 321 18 0 chr2 218885848 218885904 -31801950 + L2 LINE L2 3210 3266 -6 295 403 27 7 chr2 218886943 218887092 -31800762 + MIR SINE MIR 1 152 -110 25 75 0 0 chr2 218888004 218888057 -31799797 + AT_rich Low_complexity Low_complexity 1 53 0 24 32 0 0 chr2 218888423 218888454 -31799400 + AT_rich Low_complexity Low_complexity 1 31 0 372 59 0 0 chr2 218890195 218890246 -31797608 + (TG)n Simple_repeat Simple_repeat 2 52 0 41 72 0 0 chr2 218890289 218890372 -31797482 + AT_rich Low_complexity Low_complexity 1 83 0 28 29 0 0 chr2 218892128 218892163 -31795691 + AT_rich Low_complexity Low_complexity 1 35 0 1636 179 38 64 chr2 218892215 218892606 -31795248 + MLT1B LTR MaLR 4 384 -6 5821 154 13 0 chr2 218892626 218893893 -31793961 + L1PB1 LINE L1 4872 6151 0 313 330 21 0 chr2 218893926 218894020 -31793834 + MIR3 SINE MIR 67 162 -46 585 303 81 25 chr2 218894412 218894735 -31793119 + MER102b DNA MER1_type 1 341 0 760 195 19 6 chr2 218895048 218895207 -31792647 - FRAM SINE Alu -16 160 1 1739 151 80 17 chr2 218895390 218895741 -31792113 + THE1C LTR MaLR 1 373 -2 411 322 28 0 chr2 218896962 218897105 -31790749 - MIR SINE MIR -3 259 113 21 0 0 0 chr2 218897322 218897343 -31790511 + AT_rich Low_complexity Low_complexity 1 21 0 2241 93 0 10 chr2 218897818 218898130 -31789724 + AluSc SINE Alu 1 309 0 407 260 54 54 chr2 218898470 218898674 -31789180 - MIR SINE MIR -11 251 48 263 250 0 22 chr2 218899058 218899150 -31788704 - L1MC4 LINE L1 -1339 6703 6614 225 219 98 0 chr2 218899158 218899240 -31788614 - L1MC4 LINE L1 -1339 6703 6614 361 236 22 11 chr2 218899260 218899349 -31788505 - L1MC4 LINE L1 -1339 6703 6614 385 239 0 22 chr2 218899365 218899457 -31788397 - L1MC4 LINE L1 -1339 6703 6614 7215 140 45 47 chr2 218900987 218902287 -31785567 + HSMAR2 DNA Mariner 4 1301 -1 248 184 39 0 chr2 218902618 218902721 -31785133 + (TA)n Simple_repeat Simple_repeat 1 107 0 4572 143 40 29 chr2 218902722 218903529 -31784325 - Tigger3(Golem) DNA MER2_type -4 3025 2210 599 235 17 0 chr2 218903525 218903640 -31784214 - Tigger3(Golem) DNA MER2_type -2899 130 14 * 25575 79 1 1 chr2 218903997 218907276 -31780578 + HERVL LTR ERVL 2116 5394 -260 342 45 0 0 chr2 218907529 218907573 -31780281 + (TG)n Simple_repeat Simple_repeat 1 44 0 21 57 0 0 chr2 218907630 218907665 -31780189 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 218907793 218907814 -31780040 + AT_rich Low_complexity Low_complexity 1 21 0 202 189 0 0 chr2 218907835 218907872 -31779982 + (CA)n Simple_repeat Simple_repeat 2 38 0 1524 170 35 7 chr2 218907872 218908154 -31779700 - MER2 DNA MER2_type 0 345 56 303 28 0 0 chr2 218908184 218908220 -31779634 + (TG)n Simple_repeat Simple_repeat 1 36 0 34 24 0 0 chr2 218908343 218908384 -31779470 + AT_rich Low_complexity Low_complexity 1 41 0 511 235 20 0 chr2 218909703 218909805 -31778049 + MER5A DNA MER1_type 9 112 -77 276 198 23 12 chr2 218909829 218909915 -31777939 + (CATATA)n Simple_repeat Simple_repeat 3 89 0 320 282 26 26 chr2 218909915 218910032 -31777822 - L1MC4 LINE L1 -1337 6705 6589 290 308 98 18 chr2 218910208 218910673 -31777181 - L1ME LINE L1 -356 5765 5255 279 0 0 0 chr2 218912618 218912649 -31775205 + (TA)n Simple_repeat Simple_repeat 1 31 0 * 285 51 0 0 chr2 218912648 218912687 -31775167 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr2 218913549 218913584 -31774270 + AT_rich Low_complexity Low_complexity 1 35 0 212 342 79 13 chr2 218913907 218914059 -31773795 + L2 LINE L2 2186 2347 -967 1702 124 0 0 chr2 218915210 218915444 -31772410 - AluSx SINE Alu -77 235 2 351 314 93 0 chr2 218917298 218917416 -31770438 - L2 LINE L2 -9 3304 3176 251 346 25 0 chr2 218919068 218919149 -31768705 + L2 LINE L2 3184 3266 -6 386 93 93 6 chr2 218919350 218919512 -31768342 + (TA)n Simple_repeat Simple_repeat 2 177 0 1024 235 87 68 chr2 218921524 218921894 -31765960 + MLT1J1 LTR MaLR 66 442 -4 28 48 0 0 chr2 218921989 218922031 -31765823 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 218923061 218923085 -31764769 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr2 218923112 218923145 -31764709 + AT_rich Low_complexity Low_complexity 1 33 0 2338 93 3 0 chr2 218923342 218923644 -31764210 - AluSc SINE Alu -6 303 1 725 288 49 13 chr2 218924091 218924317 -31763537 + MIR SINE MIR 29 262 0 1901 142 17 0 chr2 218924920 218925222 -31762632 + AluJb SINE Alu 1 307 -5 267 152 0 0 chr2 218925222 218925268 -31762586 + GA-rich Low_complexity Low_complexity 1 46 0 306 296 35 70 chr2 218925671 218925843 -31762011 + L1ME4a LINE L1 5794 5959 -162 240 163 0 0 chr2 218925843 218925892 -31761962 + LTR66 LTR ERVL 394 442 -168 225 227 102 11 chr2 218925926 218926014 -31761840 + L1ME4a LINE L1 5970 6065 -56 1936 147 3 0 chr2 218926684 218926970 -31760884 - AluSx SINE Alu -25 287 1 225 0 0 0 chr2 218927303 218927328 -31760526 + (TA)n Simple_repeat Simple_repeat 1 25 0 2116 103 3 44 chr2 218927329 218927650 -31760204 + AluSx SINE Alu 5 312 0 305 329 209 6 chr2 218927828 218928168 -31759686 - L2 LINE L2 -449 2865 2457 391 282 94 66 chr2 218928898 218929079 -31758775 + MIR SINE MIR 21 206 -56 22 0 0 0 chr2 218929456 218929478 -31758376 + AT_rich Low_complexity Low_complexity 1 22 0 3437 224 70 5 chr2 218929566 218930427 -31757427 + L1MD2 LINE L1 5439 6355 -4 2885 163 95 0 chr2 218931058 218931615 -31756239 + L1MB1 LINE L1 5558 6167 -1 235 188 21 0 chr2 218932162 218932210 -31755644 - L2 LINE L2 -1 3312 3264 3144 91 0 2 chr2 218932389 218932828 -31755026 - L1PA14 LINE L1 -2 6159 5722 3061 91 31 0 chr2 218932836 218933292 -31754562 + L1PA14 LINE L1 5240 5708 -453 223 345 11 11 chr2 218933303 218933390 -31754464 - L2 LINE L2 -229 3084 2998 225 314 88 36 chr2 218934591 218934785 -31753069 + L2 LINE L2 2850 3053 -219 226 141 51 13 chr2 218934869 218934947 -31752907 + (TA)n Simple_repeat Simple_repeat 1 81 0 996 253 54 4 chr2 218935046 218935287 -31752567 - MIR SINE MIR -5 257 5 261 307 18 0 chr2 218935295 218935409 -31752445 + (TA)n Simple_repeat Simple_repeat 2 117 0 30 27 0 0 chr2 218935755 218935792 -31752062 + AT_rich Low_complexity Low_complexity 1 37 0 2231 59 10 13 chr2 218935821 218936126 -31751728 - L1PA10 LINE L1 -3 6165 5862 612 202 0 136 chr2 218936173 218936237 -31751617 - MER5B DNA MER1_type -4 174 103 1036 180 0 0 chr2 218936237 218936409 -31751445 + FAM SINE Alu 1 172 -3 612 202 0 136 chr2 218936409 218936542 -31751312 - MER5B DNA MER1_type -75 103 4 266 254 0 14 chr2 218937113 218937184 -31750670 + MLT1I LTR MaLR 330 399 -10 31 26 0 0 chr2 218938886 218938924 -31748930 + AT_rich Low_complexity Low_complexity 1 38 0 273 57 0 0 chr2 218939563 218939598 -31748256 + (CTATA)n Simple_repeat Simple_repeat 1 35 0 2211 151 67 15 chr2 218939985 218940389 -31747465 + MSTB LTR MaLR 1 425 -1 2175 91 0 61 chr2 218940696 218941026 -31746828 - AluSg SINE Alu 0 310 1 25 31 0 0 chr2 218941479 218941511 -31746343 + AT_rich Low_complexity Low_complexity 1 32 0 260 291 88 40 chr2 218941652 218941800 -31746054 + MIR SINE MIR 78 232 -30 501 277 161 13 chr2 218943658 218943813 -31744041 - MER45A DNA AcHobo 0 178 1 23 33 0 0 chr2 218944936 218944966 -31742888 + AT_rich Low_complexity Low_complexity 1 30 0 967 208 26 22 chr2 218945116 218945347 -31742507 + MER46A DNA MER2_type 5 236 0 1535 232 60 23 chr2 218945579 218945928 -31741926 + MLT1A2 LTR MaLR 13 374 0 216 0 0 0 chr2 218946252 218946276 -31741578 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 233 255 0 0 chr2 218947256 218947307 -31740547 + (TA)n Simple_repeat Simple_repeat 1 51 0 210 361 262 0 chr2 218948517 218948639 -31739215 + L2 LINE L2 3116 3269 -3 1701 153 29 0 chr2 218949966 218950241 -31737613 + AluSx SINE Alu 3 285 -27 252 0 0 0 chr2 218950241 218950269 -31737585 + (CA)n Simple_repeat Simple_repeat 2 29 0 256 241 170 45 chr2 218951994 218952106 -31735748 - L2 LINE L2 -6 3266 3141 219 150 0 0 chr2 218952443 218952483 -31735371 + (T)n Simple_repeat Simple_repeat 1 40 0 206 145 87 0 chr2 218953006 218953075 -31734779 + (TA)n Simple_repeat Simple_repeat 2 76 0 278 253 44 0 chr2 218953082 218953173 -31734681 + L1MC4 LINE L1 6614 6708 -1334 236 247 0 12 chr2 218953106 218953187 -31734667 - L1MC4 LINE L1 -1322 6720 6641 * 581 100 0 0 chr2 218954012 218954092 -31733762 - MADE1 DNA Mariner 0 80 1 1025 204 34 13 chr2 218956185 218956457 -31731397 + L1MB1 LINE L1 5921 6197 0 566 302 51 38 chr2 218957285 218957520 -31730334 - MIR SINE MIR -11 251 14 1721 91 4 4 chr2 218958176 218958406 -31729448 - AluSq SINE Alu -8 305 76 297 297 8 8 chr2 218958537 218958655 -31729199 + GA-rich Low_complexity Low_complexity 1 118 0 1305 293 119 58 chr2 218958839 218959792 -31728062 + L2 LINE L2 2254 3263 -50 262 345 157 18 chr2 218963371 218963600 -31724254 - MIR SINE MIR -1 261 1 25 0 0 0 chr2 218963617 218963642 -31724212 + AT_rich Low_complexity Low_complexity 1 25 0 180 349 78 31 chr2 218965947 218966076 -31721778 + MIR SINE MIR 20 154 -108 226 355 7 92 chr2 218966141 218966293 -31721561 + L2 LINE L2 3134 3272 0 345 324 24 6 chr2 218966590 218966760 -31721094 + L1 LINE L1 4763 4935 -1211 205 318 16 0 chr2 218966919 218966982 -31720872 - MIR SINE MIR -68 140 77 3005 82 47 5 chr2 218967862 218968288 -31719566 + MLT2A1 LTR ERVL 1 444 0 20009 79 17 16 chr2 218968288 218970993 -31716861 + HERVL-A1 LTR ERVL 1 2708 -2946 1091 88 19 0 chr2 218971093 218971253 -31716601 + HERVL-A1 LTR ERVL 5492 5654 0 2969 78 62 7 chr2 218971253 218971633 -31716221 + MLT2A1 LTR ERVL 1 408 -36 501 17 0 0 chr2 218971633 218971691 -31716163 + (TA)n Simple_repeat Simple_repeat 2 59 0 2969 78 62 7 chr2 218971691 218971731 -31716123 + MLT2A1 LTR ERVL 408 444 0 2358 85 7 3 chr2 218972042 218972349 -31715505 - AluY SINE Alu -3 308 1 297 0 0 0 chr2 218972827 218972860 -31714994 + (TG)n Simple_repeat Simple_repeat 2 34 0 29 0 0 0 chr2 218974862 218974891 -31712963 + AT_rich Low_complexity Low_complexity 1 29 0 1783 223 75 21 chr2 218975270 218975749 -31712105 + MLT1D LTR MaLR 1 505 0 968 181 0 28 chr2 218975896 218976073 -31711781 + AluJo SINE Alu 1 172 -140 21 36 0 0 chr2 218977667 218977695 -31710159 + AT_rich Low_complexity Low_complexity 1 28 0 23 86 0 0 chr2 218977850 218977908 -31709946 + AT_rich Low_complexity Low_complexity 1 58 0 392 320 70 20 chr2 218978067 218978267 -31709587 + MIR SINE MIR 52 261 -1 2261 112 0 0 chr2 218978996 218979290 -31708564 - AluSg SINE Alu -16 294 1 228 281 62 0 chr2 218979822 218979886 -31707968 + MIR3 SINE MIR 93 160 -48 682 136 68 45 chr2 218980457 218980589 -31707265 + MER3 DNA MER1_type 10 144 -65 396 265 39 0 chr2 218980898 218981000 -31706854 - L2 LINE L2 0 3313 3208 26 30 0 0 chr2 218981785 218981818 -31706036 + AT_rich Low_complexity Low_complexity 1 33 0 37 39 0 0 chr2 218982978 218983029 -31704825 + AT_rich Low_complexity Low_complexity 1 51 0 289 272 62 12 chr2 218983139 218983220 -31704634 - L2 LINE L2 -4 3309 3225 199 267 160 0 chr2 218983937 218984012 -31703842 + L2 LINE L2 3186 3272 0 2617 156 40 31 chr2 218984386 218984963 -31702891 + L1MA5 LINE L1 4383 4964 -1182 2109 122 60 28 chr2 218984964 218985317 -31702537 + THE1B LTR MaLR 1 364 0 9214 113 96 5 chr2 218985317 218986765 -31701089 + THE1B-int LTR MaLR 1 1580 0 2112 123 48 34 chr2 218986766 218987124 -31700730 + THE1B LTR MaLR 2 364 0 5912 159 19 5 chr2 218987125 218988443 -31699411 + L1MA5 LINE L1 4962 6298 -2 315 0 0 0 chr2 218989942 218989977 -31697877 + (CA)n Simple_repeat Simple_repeat 1 35 0 276 229 71 0 chr2 218990215 218990285 -31697569 + MIR3 SINE MIR 110 184 -24 1097 233 4 37 chr2 218991259 218991401 -31696453 - MER8 DNA MER2_type -2 237 92 2155 127 28 19 chr2 218991401 218991762 -31696092 + THE1B LTR MaLR 1 364 0 11267 102 6 9 chr2 218991762 218993348 -31694506 + THE1B-int LTR MaLR 1 1580 0 2018 141 54 25 chr2 218993348 218993702 -31694152 + THE1B LTR MaLR 1 364 0 1097 233 4 37 chr2 218993702 218993802 -31694052 - MER8 DNA MER2_type -144 95 1 340 336 24 43 chr2 218995506 218995714 -31692140 + MLT1K LTR MaLR 233 436 -152 413 295 60 12 chr2 218997334 218997500 -31690354 - MIR SINE MIR -83 179 6 362 219 95 9 chr2 218997659 218997764 -31690090 - MER5C DNA MER1_type 0 324 211 311 214 265 0 chr2 218997791 218997889 -31689965 - MER5C DNA MER1_type -200 124 1 439 234 62 23 chr2 218999875 219000003 -31687851 - FLAM_A SINE Alu 0 133 1 415 188 0 12 chr2 219000006 219000086 -31687768 - AluJ/FLAM SINE Alu -225 87 9 520 263 29 34 chr2 219000230 219000405 -31687449 + MER45A DNA AcHobo 5 178 0 31 26 0 0 chr2 219000823 219000861 -31686993 + AT_rich Low_complexity Low_complexity 1 38 0 321 324 145 17 chr2 219000872 219001051 -31686803 + L2 LINE L2 2521 2722 -592 418 295 46 105 chr2 219001078 219001203 -31686651 + L2 LINE L2 3005 3136 -177 225 0 0 0 chr2 219001203 219001228 -31686626 + (CA)n Simple_repeat Simple_repeat 1 25 0 418 295 46 105 chr2 219001228 219001427 -31686427 + L2 LINE L2 3136 3310 -3 553 268 10 0 chr2 219002029 219002177 -31685677 + MIR SINE MIR 102 249 -13 195 129 0 0 chr2 219004348 219004379 -31683475 + (TC)n Simple_repeat Simple_repeat 1 31 0 271 269 77 10 chr2 219004536 219004640 -31683214 - MIR SINE MIR -16 246 136 23 54 0 0 chr2 219005207 219005244 -31682610 + AT_rich Low_complexity Low_complexity 1 37 0 293 299 150 31 chr2 219005360 219005487 -31682367 - L2 LINE L2 -397 2917 2776 294 222 66 12 chr2 219006119 219006286 -31681568 + (TA)n Simple_repeat Simple_repeat 2 177 0 243 230 149 23 chr2 219007484 219007571 -31680283 - MIR SINE MIR -66 196 99 1917 137 3 26 chr2 219007659 219007966 -31679888 - AluSc SINE Alu -5 304 5 2256 83 0 0 chr2 219008796 219009085 -31678769 - AluY SINE Alu -22 289 1 21 0 0 0 chr2 219010647 219010668 -31677186 + AT_rich Low_complexity Low_complexity 1 21 0 1717 169 30 38 chr2 219010697 219011065 -31676789 - MLT1A1 LTR MaLR 0 365 1 250 319 37 7 chr2 219012624 219012759 -31675095 - L2 LINE L2 -8 3305 3167 260 233 50 0 chr2 219012847 219012907 -31674947 - MIR SINE MIR -78 184 122 355 323 50 80 chr2 219013026 219013363 -31674491 + L2 LINE L2 1756 2082 -1232 266 0 29 0 chr2 219013368 219013402 -31674452 + (TC)n Simple_repeat Simple_repeat 1 35 0 205 373 49 21 chr2 219013420 219013562 -31674292 + L2 LINE L2 2618 2763 -551 357 311 8 8 chr2 219013608 219013730 -31674124 - LTR67 LTR ERVL -5 552 431 24 32 0 0 chr2 219014759 219014790 -31673064 + AT_rich Low_complexity Low_complexity 1 31 0 250 284 0 30 chr2 219015291 219015358 -31672496 + L2 LINE L2 3183 3247 -25 25 0 0 0 chr2 219017440 219017465 -31670389 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr2 219018333 219018380 -31669474 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr2 219019050 219019078 -31668776 + AT_rich Low_complexity Low_complexity 1 28 0 2231 100 10 3 chr2 219021947 219022247 -31665607 + AluSq SINE Alu 1 302 -11 23 68 0 0 chr2 219022250 219022294 -31665560 + AT_rich Low_complexity Low_complexity 1 44 0 296 207 17 0 chr2 219022330 219022388 -31665466 - AluSp/q SINE Alu -12 291 233 231 292 70 41 chr2 219022833 219023004 -31664850 + Charlie8 DNA MER1_type 1 176 -2241 276 130 0 0 chr2 219023146 219023192 -31664662 + (TG)n Simple_repeat Simple_repeat 1 46 0 27 29 0 0 chr2 219023695 219023729 -31664125 + AT_rich Low_complexity Low_complexity 1 34 0 202 344 65 21 chr2 219023910 219024003 -31663851 - MER5B DNA MER1_type -7 171 75 28 29 0 0 chr2 219024331 219024366 -31663488 + AT_rich Low_complexity Low_complexity 1 35 0 30 0 0 0 chr2 219026999 219027029 -31660825 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 219027299 219027320 -31660534 + AT_rich Low_complexity Low_complexity 1 21 0 466 357 35 18 chr2 219027358 219027585 -31660269 - MIR SINE MIR 0 262 32 469 250 120 71 chr2 219027630 219027814 -31660040 + MLT1J1 LTR MaLR 1 193 -253 1606 164 33 0 chr2 219027815 219028089 -31659765 - AluJb SINE Alu -6 306 24 326 228 16 106 chr2 219028184 219028307 -31659547 + MLT1J2 LTR MaLR 339 450 0 26 30 0 0 chr2 219029326 219029359 -31658495 + AT_rich Low_complexity Low_complexity 1 33 0 320 259 85 18 chr2 219029456 219029686 -31658168 + L1MEc LINE L1 2310 2495 -4045 2136 119 0 19 chr2 219030128 219030446 -31657408 - AluSx SINE Alu 0 312 1 837 243 46 19 chr2 219030559 219030955 -31656899 + LTR40c LTR ERVL 3 465 0 13611 128 34 32 chr2 219030958 219033368 -31654486 + Tigger1 DNA MER2_type 2 2417 -1 24 32 0 0 chr2 219034530 219034561 -31653293 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 219034610 219034631 -31653223 + AT_rich Low_complexity Low_complexity 1 21 0 234 62 0 0 chr2 219035188 219035220 -31652634 + (TA)n Simple_repeat Simple_repeat 1 32 0 252 0 0 0 chr2 219035255 219035283 -31652571 + (TA)n Simple_repeat Simple_repeat 1 28 0 399 286 120 0 chr2 219037045 219037178 -31650676 - MLT1L LTR MaLR -348 267 119 210 118 0 0 chr2 219037374 219037408 -31650446 + (TA)n Simple_repeat Simple_repeat 1 34 0 202 288 75 12 chr2 219037452 219037532 -31650322 + MIR SINE MIR 173 257 -5 210 385 70 56 chr2 219038021 219038234 -31649620 + L2 LINE L2 2943 3158 -114 416 332 33 92 chr2 219038415 219038580 -31649274 - MIR SINE MIR 0 262 117 2222 60 3 3 chr2 219038580 219038887 -31648967 + AluY SINE Alu 1 307 0 416 332 33 92 chr2 219038887 219038991 -31648863 - MIR SINE MIR -145 117 8 2238 89 0 0 chr2 219039574 219039855 -31647999 + AluSc SINE Alu 1 281 -28 22 35 0 0 chr2 219040740 219040769 -31647085 + AT_rich Low_complexity Low_complexity 1 29 0 351 283 98 99 chr2 219040787 219041371 -31646483 + L1ME4a LINE L1 5537 6119 -2 348 300 115 8 chr2 219041474 219041604 -31646250 + MIR3 SINE MIR 39 182 -26 712 82 0 0 chr2 219044546 219044644 -31643210 + L1PA7 LINE L1 5950 6047 -107 * 2190 190 57 10 chr2 219044622 219045117 -31642737 + L1MA5 LINE L1 5783 6300 0 630 263 58 18 chr2 219046651 219046822 -31641032 - MIR SINE MIR -4 258 81 469 318 108 0 chr2 219047194 219047389 -31640465 + MIR SINE MIR 46 261 -1 272 347 13 20 chr2 219047454 219047604 -31640250 - L2 LINE L2 -923 2391 2243 331 320 109 6 chr2 219047778 219047953 -31639901 + MIR SINE MIR 37 229 -33 813 309 18 18 chr2 219048908 219049183 -31638671 - L3 LINE CR1 -136 1441 1167 24 77 0 0 chr2 219049281 219049333 -31638521 + AT_rich Low_complexity Low_complexity 1 52 0 291 116 0 0 chr2 219052378 219052421 -31635433 + MADE1 DNA Mariner 1 43 -37 485 251 39 50 chr2 219052581 219052740 -31635114 + MER69A DNA AcHobo 1 160 -2366 234 0 0 0 chr2 219052740 219052766 -31635088 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2335 46 3 0 chr2 219052766 219053051 -31634803 - L1PA3 LINE L1 -13 6142 5857 485 251 39 50 chr2 219053051 219053069 -31634785 + MER69A DNA AcHobo 158 177 0 236 214 51 61 chr2 219057774 219057872 -31629982 - MER91C DNA MER1_type -26 114 18 210 231 0 0 chr2 219061232 219061284 -31626570 + (CA)n Simple_repeat Simple_repeat 2 53 0 207 0 0 0 chr2 219062182 219062205 -31625649 + (CGG)n Simple_repeat Simple_repeat 2 24 0 26 64 0 0 chr2 219063664 219063711 -31624143 + GC_rich Low_complexity Low_complexity 1 47 0 194 190 0 17 chr2 219065723 219065781 -31622073 + T-rich Low_complexity Low_complexity 3 59 0 1570 169 41 69 chr2 219066003 219066323 -31621531 + AluJo SINE Alu 1 311 -1 25 0 0 0 chr2 219068168 219068193 -31619661 + AT_rich Low_complexity Low_complexity 1 25 0 232 277 196 0 chr2 219068226 219068338 -31619516 + MIR3 SINE MIR 74 207 -1 1420 205 24 68 chr2 219068479 219068849 -31619005 - MLT1A1 LTR MaLR -11 354 1 2733 93 5 5 chr2 219070623 219070998 -31616856 - THE1C LTR MaLR 0 375 1 33 0 0 0 chr2 219072079 219072112 -31615742 + AT_rich Low_complexity Low_complexity 1 33 0 180 200 0 0 chr2 219073971 219074021 -31613833 + (TA)n Simple_repeat Simple_repeat 2 51 0 231 239 0 0 chr2 219075532 219075620 -31612234 + (TA)n Simple_repeat Simple_repeat 2 89 0 254 250 0 56 chr2 219075960 219076068 -31611786 + (TA)n Simple_repeat Simple_repeat 2 103 0 2139 113 0 13 chr2 219076155 219076466 -31611388 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr2 219076564 219076590 -31611264 + AT_rich Low_complexity Low_complexity 1 26 0 2082 162 26 11 chr2 219076888 219077239 -31610615 - MLT1A1 LTR MaLR -4 361 6 1030 146 41 1 chr2 219078429 219078703 -31609151 + L1P5 LINE L1 5174 5455 -701 5333 120 9 2 chr2 219078805 219079615 -31608239 - Tigger1 DNA MER2_type -1189 1229 415 1266 152 89 0 chr2 219079614 219079851 -31608003 - Tigger1 DNA MER2_type -2159 259 2 * 21 0 0 0 chr2 219080865 219080886 -31606968 + AT_rich Low_complexity Low_complexity 1 21 0 234 260 55 27 chr2 219081329 219081402 -31606452 + MIR3 SINE MIR 127 201 -7 2998 160 20 26 chr2 219082086 219082692 -31605162 - L1MA7 LINE L1 0 6291 5690 408 329 25 89 chr2 219082967 219083362 -31604492 + L1M4 LINE L1 3923 4292 -1854 3652 152 0 13 chr2 219083469 219084089 -31603765 + L1PB4 LINE L1 5544 6155 -1 24 0 0 0 chr2 219085282 219085306 -31602548 + AT_rich Low_complexity Low_complexity 1 24 0 2469 48 20 0 chr2 219087342 219087634 -31600220 + AluY SINE Alu 1 298 -13 583 265 106 6 chr2 219087645 219087815 -31600039 + MIR SINE MIR 36 222 -40 180 326 81 0 chr2 219087885 219087971 -31599883 - L2 LINE L2 -92 3221 3129 219 284 45 15 chr2 219088699 219088766 -31599088 - L2 LINE L2 0 3272 3204 2178 102 0 23 chr2 219089056 219089359 -31598495 - AluSc SINE Alu -11 298 3 1327 168 23 4 chr2 219089530 219089792 -31598062 + L1MB1 LINE L1 5908 6174 -15 231 270 0 27 chr2 219089838 219089912 -31597942 - L2 LINE L2 -1328 1986 1915 1199 222 109 30 chr2 219089990 219090430 -31597424 + MLT1E2 LTR MaLR 93 626 0 262 221 39 0 chr2 219091080 219091157 -31596697 + (TA)n Simple_repeat Simple_repeat 1 80 0 21 71 0 0 chr2 219092059 219092101 -31595753 + AT_rich Low_complexity Low_complexity 1 42 0 1062 0 0 0 chr2 219092141 219092259 -31595595 + AluYa5/8 SINE Alu 194 311 0 24 53 0 0 chr2 219092453 219092491 -31595363 + AT_rich Low_complexity Low_complexity 1 38 0 2157 106 0 3 chr2 219094671 219094997 -31592857 + AluSq SINE Alu 3 327 0 393 57 0 0 chr2 219095289 219095342 -31592512 + MADE1 DNA Mariner 28 80 0 212 291 0 18 chr2 219096253 219096308 -31591546 + L2 LINE L2 3210 3263 -9 1899 135 19 50 chr2 219098618 219098937 -31588917 - AluSx SINE Alu -3 309 1 392 319 68 47 chr2 219099194 219099429 -31588425 + L2 LINE L2 3074 3313 0 24 0 0 0 chr2 219099936 219099960 -31587894 + AT_rich Low_complexity Low_complexity 1 24 0 425 333 45 22 chr2 219100375 219100597 -31587257 + L3 LINE CR1 1286 1512 -65 433 304 30 50 chr2 219100626 219100827 -31587027 - MLT1K LTR MaLR -123 465 269 378 252 54 9 chr2 219100928 219101039 -31586815 - MLT1K LTR MaLR -463 125 10 196 250 0 0 chr2 219101087 219101127 -31586727 + L3 LINE CR1 1533 1572 -5 418 329 259 0 chr2 219101802 219101972 -31585882 + MIR SINE MIR 3 216 -46 320 58 0 39 chr2 219102167 219102219 -31585635 + (TTATA)n Simple_repeat Simple_repeat 3 52 0 1949 153 0 10 chr2 219103134 219103448 -31584406 + AluJb SINE Alu 1 311 -1 22 35 0 0 chr2 219103534 219103563 -31584291 + AT_rich Low_complexity Low_complexity 1 29 0 5193 150 36 0 chr2 219104352 219105210 -31582644 - Tigger1 DNA MER2_type -3 2415 1527 21 0 0 0 chr2 219105210 219105231 -31582623 + AT_rich Low_complexity Low_complexity 1 21 0 5715 156 29 12 chr2 219105231 219106284 -31581570 - L1MA4 LINE L1 -1 6299 5210 2331 78 3 0 chr2 219106284 219106578 -31581276 - AluSg SINE Alu 0 310 16 5715 156 29 12 chr2 219106578 219107296 -31580558 - L1MA4 LINE L1 -1090 5210 4506 1594 145 21 150 chr2 219107296 219107920 -31579934 + L1M1 LINE L1 3242 3781 -3784 943 124 0 0 chr2 219107922 219108059 -31579795 - Tigger1 DNA MER2_type -880 1538 1402 21 0 0 0 chr2 219108249 219108270 -31579584 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 219108397 219108421 -31579433 + AT_rich Low_complexity Low_complexity 1 24 0 17715 60 6 3 chr2 219108625 219110973 -31576881 - L1P LINE L1 -2713 3433 1081 771 33 0 0 chr2 219110951 219111043 -31576811 - L1P LINE L1 -6044 102 11 * 867 250 5 5 chr2 219111047 219111255 -31576599 + AluJo SINE Alu 13 220 -92 7587 50 21 0 chr2 219111281 219112240 -31575614 + L1P LINE L1 3489 4467 -1679 306 299 0 10 chr2 219112737 219112834 -31575020 + LTR67 LTR ERVL 428 523 -34 412 280 129 52 chr2 219112872 219113200 -31574654 - L1ME LINE L1 -397 5724 5372 320 267 11 11 chr2 219113748 219113838 -31574016 + MIR SINE MIR 73 162 -100 800 284 25 13 chr2 219113863 219114099 -31573755 + MIR SINE MIR 2 240 -22 254 232 0 0 chr2 219114119 219114175 -31573679 + MIR SINE MIR 194 249 -13 219 139 0 0 chr2 219114354 219114390 -31573464 + (GGAA)n Simple_repeat Simple_repeat 2 37 0 282 341 73 34 chr2 219115781 219115986 -31571868 - L2 LINE L2 -549 2765 2553 1837 129 4 4 chr2 219116122 219116394 -31571460 + AluSx SINE Alu 33 304 -8 323 278 62 56 chr2 219116394 219116538 -31571316 + MIR SINE MIR 32 176 -86 915 80 0 0 chr2 219116766 219116891 -31570963 + (TA)n Simple_repeat Simple_repeat 1 125 0 1912 136 37 0 chr2 219117460 219117754 -31570100 - AluSx SINE Alu -5 307 3 654 216 0 0 chr2 219118660 219118785 -31569069 - FLAM_C SINE Alu -8 125 1 229 343 68 55 chr2 219119499 219119718 -31568136 + MIR SINE MIR 28 249 -13 22 0 0 0 chr2 219119720 219119742 -31568112 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 219119920 219119942 -31567912 + AT_rich Low_complexity Low_complexity 1 22 0 36 53 0 0 chr2 219120084 219120141 -31567713 + AT_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr2 219120938 219120960 -31566894 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 219121293 219121315 -31566539 + (T)n Simple_repeat Simple_repeat 1 22 0 238 156 47 31 chr2 219121502 219121566 -31566288 + LTR67 LTR ERVL 475 539 -18 185 385 19 19 chr2 219122096 219122200 -31565654 + MIR SINE MIR 41 144 -64 280 176 92 42 chr2 219122835 219122954 -31564900 - L1ME4a LINE L1 -30 6091 5967 200 196 0 71 chr2 219122956 219122986 -31564868 + CT-rich Low_complexity Low_complexity 2 28 -25 2321 110 0 0 chr2 219122986 219123295 -31564559 - AluSx SINE Alu -3 309 1 200 196 0 71 chr2 219123295 219123320 -31564534 + CT-rich Low_complexity Low_complexity 28 53 0 29 0 0 0 chr2 219124230 219124259 -31563595 + AT_rich Low_complexity Low_complexity 1 29 0 183 337 157 0 chr2 219124285 219124368 -31563486 - L2 LINE L2 -16 3297 3202 22 0 0 0 chr2 219125367 219125389 -31562465 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 219125764 219125801 -31562053 + AT_rich Low_complexity Low_complexity 1 37 0 535 319 0 0 chr2 219127209 219127344 -31560510 - MIR3 SINE MIR -17 191 57 2267 100 0 25 chr2 219128513 219128832 -31559022 + AluSx SINE Alu 1 311 -1 312 208 62 31 chr2 219128878 219128974 -31558880 + L1ME4a LINE L1 5991 6089 -32 1204 260 118 15 chr2 219129905 219130312 -31557542 + L1M2 LINE L1 10 458 -6391 372 291 142 75 chr2 219130337 219130797 -31557057 + L1M2 LINE L1 613 1048 -5801 320 265 104 97 chr2 219130799 219131067 -31556787 + L1M2 LINE L1 725 994 -5855 1425 186 4 0 chr2 219131111 219131369 -31556485 + L1PB4 LINE L1 5897 6155 -1 943 221 156 64 chr2 219131441 219131723 -31556131 + L1ME1 LINE L1 5879 6150 -16 705 296 110 4 chr2 219131802 219132066 -31555788 - MLT1I LTR MaLR -2 407 116 1949 295 63 25 chr2 219132442 219133384 -31554470 + L2 LINE L2 2322 3313 0 40 73 0 0 chr2 219133981 219134063 -31553791 + AT_rich Low_complexity Low_complexity 1 82 0 2219 93 3 0 chr2 219134138 219134428 -31553426 + AluSp SINE Alu 1 291 -22 715 308 37 21 chr2 219134719 219135187 -31552667 - LTR33 LTR ERVL 0 521 1 2689 179 46 18 chr2 219136556 219137103 -31550751 + MER68 LTR ERV1 1 562 0 1678 286 153 6 chr2 219137325 219137996 -31549858 + LTR50 LTR ERVL 20 789 -6 1925 176 26 17 chr2 219138164 219138516 -31549338 - MLT1C LTR MaLR -90 377 23 492 262 180 41 chr2 219138544 219138811 -31549043 + MLT1J1 LTR MaLR 139 442 -4 3527 180 64 65 chr2 219138925 219139829 -31548025 + L1MA9 LINE L1 5402 6304 -8 40 21 0 0 chr2 219140011 219140058 -31547796 + AT_rich Low_complexity Low_complexity 1 47 0 1386 183 76 0 chr2 219140212 219140475 -31547379 + AluJb SINE Alu 1 283 -29 231 215 15 31 chr2 219140475 219140535 -31547319 + (CAGT)n Simple_repeat Simple_repeat 4 62 0 247 302 12 23 chr2 219141608 219141694 -31546160 + MIR SINE MIR 71 155 -107 1118 168 10 5 chr2 219141743 219141939 -31545915 - AluY SINE Alu -20 291 95 518 164 0 10 chr2 219142009 219142113 -31545741 + CT-rich Low_complexity Low_complexity 1 103 0 234 213 27 0 chr2 219142239 219142314 -31545540 + CT-rich Low_complexity Low_complexity 1 77 0 2080 138 0 0 chr2 219142345 219142641 -31545213 - AluSx SINE Alu -16 296 1 23 54 0 0 chr2 219143767 219143804 -31544050 + AT_rich Low_complexity Low_complexity 1 37 0 332 364 18 0 chr2 219144755 219144865 -31542989 - MIR SINE MIR -64 144 33 2931 253 70 23 chr2 219146118 219148742 -31539112 + L1MA9 LINE L1 1 2495 -3715 * 6732 202 55 28 chr2 219148724 219150563 -31537291 + L1MA9 LINE L1 2951 4839 -1371 1255 174 0 68 chr2 219150563 219150828 -31537026 + AluJo SINE Alu 47 293 -19 2203 95 0 3 chr2 219150861 219151156 -31536698 + AluY SINE Alu 1 294 -17 5050 155 42 35 chr2 219151176 219152535 -31535319 + L1MA9 LINE L1 4847 6233 -143 255 31 0 0 chr2 219152535 219152567 -31535287 + (CA)n Simple_repeat Simple_repeat 1 32 0 5050 155 42 35 chr2 219152567 219152710 -31535144 + L1MA9 LINE L1 6233 6374 -2 524 313 91 14 chr2 219152764 219153147 -31534707 - L2 LINE L2 -183 3130 2720 1312 309 135 19 chr2 219153172 219153942 -31533912 - L2 LINE L2 -1529 1785 927 1172 211 69 16 chr2 219154063 219154366 -31533488 - LTR10C LTR ERV1 -29 562 244 26 0 0 0 chr2 219155793 219155819 -31532035 + AT_rich Low_complexity Low_complexity 1 26 0 184 200 29 0 chr2 219155936 219156006 -31531848 + CT-rich Low_complexity Low_complexity 2 73 0 288 335 100 24 chr2 219156389 219156729 -31531125 - L1ME LINE L1 -357 5764 5399 574 339 29 40 chr2 219157739 219158114 -31529740 - L2 LINE L2 -1690 1624 1254 823 206 41 0 chr2 219158226 219158396 -31529458 + MER5A DNA MER1_type 3 179 -10 23 54 0 0 chr2 219158704 219158741 -31529113 + AT_rich Low_complexity Low_complexity 1 37 0 233 237 0 0 chr2 219158741 219158800 -31529054 - L1PB1 LINE L1 -2 6149 6091 * 6228 35 4 0 chr2 219158795 219159543 -31528311 - L1PA4 LINE L1 -2 6153 5403 1895 167 0 0 chr2 219159683 219159970 -31527884 - AluJo SINE Alu -25 287 1 25 31 0 0 chr2 219160003 219160035 -31527819 + AT_rich Low_complexity Low_complexity 1 32 0 1754 147 42 3 chr2 219160408 219160694 -31527160 + AluJb SINE Alu 1 297 -15 364 224 75 93 chr2 219161102 219161316 -31526538 + L1MC5 LINE L1 7746 7955 -6 351 306 21 103 chr2 219161807 219162049 -31525805 + MIR SINE MIR 26 247 -15 294 87 0 0 chr2 219162463 219162509 -31525345 + (TG)n Simple_repeat Simple_repeat 2 47 0 450 232 51 22 chr2 219162638 219162776 -31525078 - L2 LINE L2 0 3313 3172 21 71 0 0 chr2 219163213 219163255 -31524599 + AT_rich Low_complexity Low_complexity 1 42 0 633 251 128 10 chr2 219163282 219163477 -31524377 - MIR SINE MIR -39 223 6 1077 293 81 26 chr2 219163486 219163944 -31523910 + MER74B LTR ERVL 66 548 -74 227 221 221 0 chr2 219163879 219163956 -31523898 - MER88 LTR ERVL -292 172 79 * 441 157 50 129 chr2 219164431 219164571 -31523283 + MER57A LTR ERV1 275 403 0 282 188 50 62 chr2 219164772 219164852 -31523002 + L2 LINE L2 3165 3243 -70 26 0 0 0 chr2 219166090 219166116 -31521738 + AT_rich Low_complexity Low_complexity 1 26 0 8004 166 17 26 chr2 219166746 219169070 -31518784 - L1PB1 LINE L1 -38 6829 4529 612 56 0 56 chr2 219169070 219169159 -31518695 - L1PA5 LINE L1 -8 6146 6063 8004 166 17 26 chr2 219169159 219169461 -31518393 - L1PB1 LINE L1 -2338 4529 4226 2298 104 42 21 chr2 219169495 219170332 -31517522 - L1PB1 LINE L1 -5230 1633 634 1060 168 0 20 chr2 219170332 219170535 -31517319 - L1PB1 LINE L1 -6663 200 2 197 403 40 32 chr2 219172957 219173081 -31514773 - L2 LINE L2 -15 3257 3133 551 101 13 0 chr2 219174244 219174323 -31513531 + MADE1 DNA Mariner 1 80 0 * 1300 178 9 99 chr2 219174323 219174664 -31513190 - MLT1A1 LTR MaLR -32 333 24 503 312 42 5 chr2 219174845 219175034 -31512820 - L2 LINE L2 0 3313 3118 746 291 117 109 chr2 219175262 219176255 -31511599 - L2 LINE L2 -526 2788 1788 2144 110 27 0 chr2 219176349 219176649 -31511205 + AluSx SINE Alu 1 308 -4 225 0 0 0 chr2 219177371 219177396 -31510458 + (A)n Simple_repeat Simple_repeat 1 25 0 283 304 276 14 chr2 219178033 219178247 -31509607 + L3 LINE CR1 1012 1281 -296 249 250 50 92 chr2 219178651 219178771 -31509083 - MIR SINE MIR -17 245 131 326 312 206 20 chr2 219178843 219179042 -31508812 + L3 LINE CR1 1341 1576 -1 451 358 24 24 chr2 219179057 219179311 -31508543 + MIR SINE MIR 3 256 -6 5142 134 5 1 chr2 219179502 219179894 -31507960 - L1PA16 LINE L1 0 6817 6428 1540 207 0 20 chr2 219179894 219180193 -31507661 - AluJb SINE Alu -19 293 1 5142 134 5 1 chr2 219180193 219180281 -31507573 - L1PA16 LINE L1 -389 6428 6342 288 0 0 0 chr2 219180281 219180313 -31507541 + (CA)n Simple_repeat Simple_repeat 2 33 0 5142 134 5 1 chr2 219180313 219181266 -31506588 - L1PA16 LINE L1 -475 6342 5381 10169 230 30 16 chr2 219181273 219184966 -31502888 - L1PA16 LINE L1 -1716 5081 1326 1743 306 27 26 chr2 219185049 219185634 -31502220 - L1PA16 LINE L1 -6201 586 1 645 173 73 0 chr2 219186278 219186388 -31501466 - FLAM_C SINE Alu -19 124 7 2380 57 7 10 chr2 219186522 219186820 -31501034 + AluY SINE Alu 1 297 -14 266 70 0 0 chr2 219186917 219186960 -31500894 - L1PA2 LINE L1 -2 6153 6111 582 282 155 3 chr2 219187069 219187385 -31500469 - L1ME LINE L1 -381 5789 5426 1185 322 139 36 chr2 219187794 219189437 -31498417 + L1M4 LINE L1 2180 3992 -2154 982 195 60 9 chr2 219190248 219190463 -31497391 - THE1C LTR MaLR -149 226 1 505 259 58 46 chr2 219191185 219191359 -31496495 + MER5A DNA MER1_type 7 182 -7 980 223 5 0 chr2 219191368 219191556 -31496298 + MER5A DNA MER1_type 1 189 0 23 68 0 0 chr2 219192285 219192329 -31495525 + AT_rich Low_complexity Low_complexity 1 44 0 249 368 48 22 chr2 219193233 219193461 -31494393 + L2 LINE L2 2553 2786 -528 1703 151 3 30 chr2 219193538 219193837 -31494017 + THE1C LTR MaLR 1 291 -84 3246 105 6 2 chr2 219193937 219194405 -31493449 + L1P LINE L1 3391 3860 -2286 38424 58 3 3 chr2 219194413 219200415 -31487439 + L1PA7 LINE L1 1 6002 -152 232 273 30 0 chr2 219200515 219200581 -31487273 + MIR SINE MIR 194 261 -1 21 0 0 0 chr2 219201404 219201425 -31486429 + AT_rich Low_complexity Low_complexity 1 21 0 1179 202 27 0 chr2 219201598 219201821 -31486033 + Charlie1 DNA MER1_type 9 237 -2524 817 176 7 39 chr2 219201826 219201979 -31485875 + AluJo SINE Alu 3 150 -162 348 214 0 24 chr2 219201982 219202066 -31485788 + Charlie1 DNA MER1_type 2679 2760 -1 33 43 0 0 chr2 219202326 219202373 -31485481 + AT_rich Low_complexity Low_complexity 1 47 0 263 98 0 0 chr2 219202528 219202569 -31485285 + MADE1 DNA Mariner 40 80 0 274 223 9 80 chr2 219202591 219202703 -31485151 - L1ME4a LINE L1 -53 6068 5965 517 223 158 55 chr2 219202850 219203160 -31484694 - L1ME4a LINE L1 -375 5746 5405 620 319 77 32 chr2 219203471 219203966 -31483888 + LTR33 LTR ERVL 5 521 0 180 374 72 7 chr2 219204201 219204340 -31483514 + L2 LINE L2 2808 2955 -317 823 134 8 22 chr2 219204375 219204509 -31483345 - FLAM_C SINE Alu -1 132 1 21 0 0 0 chr2 219204725 219204746 -31483108 + AT_rich Low_complexity Low_complexity 1 21 0 188 122 24 0 chr2 219205593 219205634 -31482220 + (CA)n Simple_repeat Simple_repeat 1 42 0 2207 115 0 0 chr2 219206480 219206797 -31481057 - AluSg SINE Alu 0 317 1 221 147 13 53 chr2 219208160 219208235 -31479619 + (CATA)n Simple_repeat Simple_repeat 4 75 0 1965 178 33 0 chr2 219208236 219208573 -31479281 - MER7A DNA MER2_type 0 346 1 237 178 0 0 chr2 219208634 219208679 -31479175 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 385 94 16 0 chr2 219209612 219209676 -31478178 + L1PA7 LINE L1 6090 6154 0 616 219 15 7 chr2 219209689 219209826 -31478028 - MER74A LTR ERVL -420 138 1 718 263 159 14 chr2 219209831 219210126 -31477728 + L1MC4 LINE L1 7506 7757 -238 2054 129 7 7 chr2 219210126 219210421 -31477433 + AluSx SINE Alu 1 295 -17 933 79 0 0 chr2 219210422 219210549 -31477305 + (TA)n Simple_repeat Simple_repeat 2 128 0 718 263 159 14 chr2 219210549 219210622 -31477232 + L1MC4 LINE L1 7756 7981 -14 533 309 4 50 chr2 219211611 219211870 -31475984 - L2 LINE L2 0 3313 3067 24 85 0 0 chr2 219211940 219211999 -31475855 + AT_rich Low_complexity Low_complexity 1 59 0 1555 268 119 19 chr2 219212337 219212867 -31474987 + L2 LINE L2 1885 2467 -847 187 352 14 0 chr2 219212860 219212931 -31474923 + L2 LINE L2 2889 2960 -353 * 683 153 229 0 chr2 219213176 219213346 -31474508 - MER3 DNA MER1_type 0 209 1 2107 97 14 0 chr2 219214421 219214738 -31473116 - AluSx SINE Alu 0 321 1 221 372 87 33 chr2 219214849 219215032 -31472822 - L2 LINE L2 -143 3129 2937 328 311 98 14 chr2 219215916 219216099 -31471755 + MIR3 SINE MIR 21 169 -39 21 36 0 0 chr2 219216268 219216296 -31471558 + AT_rich Low_complexity Low_complexity 1 28 0 2524 138 38 24 chr2 219217104 219217530 -31470324 + MSTB1 LTR MaLR 1 432 0 449 333 8 8 chr2 219217531 219217660 -31470194 - MIR SINE MIR -114 148 20 776 171 0 14 chr2 219218011 219218151 -31469703 - FLAM_C SINE Alu -5 138 1 1662 243 92 68 chr2 219218396 219219378 -31468476 - L1ME3A LINE L1 -9 6161 5160 967 288 46 35 chr2 219219418 219219870 -31467984 + L1M4 LINE L1 4372 4833 -1313 207 0 0 0 chr2 219219870 219219893 -31467961 + (TA)n Simple_repeat Simple_repeat 1 23 0 967 288 46 35 chr2 219219893 219220003 -31467851 + L1M4 LINE L1 4833 4940 -1206 1974 119 41 7 chr2 219220422 219220716 -31467138 - AluSq SINE Alu -9 304 1 247 310 103 29 chr2 219221201 219221375 -31466479 + LTR52 LTR ERVL 15 201 -220 5682 159 206 39 chr2 219221388 219222843 -31465011 - pTR5 LTR ERV1 0 2438 741 389 307 51 7 chr2 219223782 219223919 -31463935 - L2 LINE L2 0 3313 3171 28 61 0 0 chr2 219224222 219224271 -31463583 + AT_rich Low_complexity Low_complexity 1 49 0 207 0 0 0 chr2 219224852 219224875 -31462979 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr2 219225237 219225261 -31462593 + AT_rich Low_complexity Low_complexity 1 24 0 370 103 35 0 chr2 219225557 219225615 -31462239 + THE1B-int LTR MaLR 1521 1580 0 2408 109 25 8 chr2 219225615 219225973 -31461881 + THE1B LTR MaLR 1 364 0 321 269 112 0 chr2 219226046 219226180 -31461674 + Charlie7 DNA MER1_type 5 153 -2459 182 258 43 43 chr2 219226272 219226365 -31461489 + L2 LINE L2 3221 3313 0 1950 189 8 24 chr2 219226507 219226878 -31460976 - MLT1A1 LTR MaLR 0 365 1 441 206 22 0 chr2 219227649 219227741 -31460113 - MER94 DNA DNA -40 94 1 236 182 91 0 chr2 219227741 219227793 -31460061 + MER113 DNA MER1_type? 465 521 0 194 231 192 0 chr2 219228606 219228658 -31459196 - MIR3 SINE MIR -20 188 127 1077 211 56 7 chr2 219229640 219229924 -31457930 + L1M4 LINE L1 4563 4860 -1286 21 71 0 0 chr2 219229936 219229978 -31457876 + AT_rich Low_complexity Low_complexity 1 42 0 245 111 0 0 chr2 219229978 219230014 -31457840 + L1MA8 LINE L1 6242 6277 -14 * 1383 164 48 11 chr2 219230012 219230281 -31457573 - L1MA7 LINE L1 -323 5968 5690 439 220 26 131 chr2 219230283 219230443 -31457411 + L1M4 LINE L1 4845 5020 -1126 1638 166 6 38 chr2 219230443 219230757 -31457097 - AluJo SINE Alu -7 305 2 439 220 26 131 chr2 219230757 219230799 -31457055 + L1M4 LINE L1 5020 5016 -1130 541 197 0 129 chr2 219230799 219230946 -31456908 - FLAM_A SINE Alu -5 128 1 439 220 26 131 chr2 219230946 219231010 -31456844 + L1M4 LINE L1 5015 5084 -1062 199 266 31 0 chr2 219231360 219231424 -31456430 - L2 LINE L2 -456 2858 2793 24 0 0 0 chr2 219231518 219231542 -31456312 + AT_rich Low_complexity Low_complexity 1 24 0 261 146 0 0 chr2 219233250 219233298 -31454556 + (CA)n Simple_repeat Simple_repeat 2 49 0 217 27 81 0 chr2 219233750 219233787 -31454067 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2255 78 0 4 chr2 219233787 219234068 -31453786 - AluSx SINE Alu -32 280 1 181 372 71 0 chr2 219235097 219235210 -31452644 + L2 LINE L2 2294 2414 -900 23 0 0 0 chr2 219236873 219236896 -31450958 + AT_rich Low_complexity Low_complexity 1 23 0 272 346 54 15 chr2 219236902 219237032 -31450822 + L2 LINE L2 3179 3313 0 288 245 86 72 chr2 219237096 219237235 -31450619 - MIR3 SINE MIR -63 145 6 206 322 182 8 chr2 219237297 219237418 -31450436 + MIR3 SINE MIR 50 191 -17 6543 12 0 0 chr2 219237601 219238339 -31449515 + L1HS LINE L1 5402 6139 -16 204 67 0 0 chr2 219238339 219238369 -31449485 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 246 311 0 37 chr2 219239591 219239755 -31448099 + (CATATA)n Simple_repeat Simple_repeat 4 161 0 186 43 0 0 chr2 219240463 219240486 -31447368 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 284 240 13 13 chr2 219241777 219241852 -31446002 - MLT1L LTR MaLR -538 77 3 228 35 0 0 chr2 219242491 219242520 -31445334 + (T)n Simple_repeat Simple_repeat 1 29 0 359 314 133 42 chr2 219244774 219245271 -31442583 + L2 LINE L2 2575 3089 -224 2744 7 0 0 chr2 219245674 219245969 -31441885 + AluYa5 SINE Alu 1 295 -16 227 111 0 22 chr2 219246675 219246720 -31441134 + (TTTTA)n Simple_repeat Simple_repeat 4 47 0 2024 149 0 7 chr2 219246722 219247031 -31440823 - AluSx SINE Alu -5 307 1 26 30 0 0 chr2 219247325 219247358 -31440496 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr2 219247478 219247502 -31440352 + AT_rich Low_complexity Low_complexity 1 24 0 482 322 178 15 chr2 219248527 219248937 -31438917 - L2 LINE L2 -7 3306 2830 208 250 0 0 chr2 219249456 219249496 -31438358 + (TTCA)n Simple_repeat Simple_repeat 2 41 0 186 200 0 25 chr2 219249496 219249536 -31438318 - L2 LINE L2 0 3272 3234 200 225 0 0 chr2 219249770 219249810 -31438044 + GA-rich Low_complexity Low_complexity 3 42 0 420 202 11 43 chr2 219250631 219250725 -31437129 + AluJ/FLAM SINE Alu 5 95 -217 1971 130 29 37 chr2 219251189 219251565 -31436289 + THE1C LTR MaLR 3 375 0 1367 247 50 16 chr2 219251921 219252301 -31435553 - MSTD LTR MaLR -3 393 1 22 70 0 0 chr2 219252417 219252460 -31435394 + AT_rich Low_complexity Low_complexity 1 43 0 2290 107 0 3 chr2 219252681 219252981 -31434873 + AluSp SINE Alu 1 299 -14 1562 190 3 21 chr2 219252992 219253282 -31434572 + AluJb SINE Alu 1 285 -27 187 267 64 64 chr2 219253361 219253548 -31434306 + L2 LINE L2 2850 3036 -236 221 0 35 0 chr2 219253719 219253748 -31434106 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 198 118 0 0 chr2 219253984 219254018 -31433836 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 771 247 75 22 chr2 219254421 219254648 -31433206 + MIR SINE MIR 13 251 -11 1504 173 52 0 chr2 219255747 219255996 -31431858 - Tigger7 DNA MER2_type -470 263 2 387 0 0 0 chr2 219256078 219256121 -31431733 + (TG)n Simple_repeat Simple_repeat 2 44 0 434 112 0 11 chr2 219256806 219256895 -31430959 + (TG)n Simple_repeat Simple_repeat 1 88 0 212 59 29 0 chr2 219257355 219257389 -31430465 + (TG)n Simple_repeat Simple_repeat 2 36 0 198 71 0 0 chr2 219258154 219258182 -31429672 + (GGA)n Simple_repeat Simple_repeat 3 30 0 515 294 28 7 chr2 219258398 219258541 -31429313 + MIR SINE MIR 117 262 0 706 105 46 39 chr2 219258707 219258848 -31429006 + L1PBa LINE L1 1764 1995 -4867 21 36 0 0 chr2 219259867 219259895 -31427959 + AT_rich Low_complexity Low_complexity 1 28 0 2025 132 0 20 chr2 219259936 219260239 -31427615 - AluSx SINE Alu -15 297 1 23 33 0 0 chr2 219260281 219260311 -31427543 + AT_rich Low_complexity Low_complexity 1 30 0 416 235 71 10 chr2 219261211 219261309 -31426545 - MIR3 SINE MIR -26 182 79 3003 36 0 0 chr2 219261341 219261700 -31426154 - L1PA3 LINE L1 -2 6153 5795 1806 176 5 47 chr2 219262111 219262492 -31425362 - MER47A DNA MER2_type -1 365 1 252 287 53 0 chr2 219263063 219263157 -31424697 + L1ME LINE L1 5625 5723 -398 979 258 109 112 chr2 219263403 219263878 -31423976 + MLT1G1 LTR MaLR 9 483 -112 1632 196 44 31 chr2 219263878 219264266 -31423588 + MSTD LTR MaLR 4 396 0 979 258 109 112 chr2 219264266 219264379 -31423475 + MLT1G1 LTR MaLR 483 595 0 975 355 77 36 chr2 219265235 219266339 -31421515 - L2 LINE L2 -213 3059 1914 188 328 17 0 chr2 219266608 219266666 -31421188 - MIR SINE MIR -116 146 88 935 9 0 9 chr2 219267658 219267771 -31420083 + (GAAA)n Simple_repeat Simple_repeat 2 113 0 275 275 183 28 chr2 219267918 219268060 -31419794 + MLT1L LTR MaLR 120 283 -332 357 62 0 0 chr2 219268219 219268267 -31419587 + (CA)n Simple_repeat Simple_repeat 2 49 0 1756 202 121 79 chr2 219269184 219269778 -31418076 + L1MC4 LINE L1 6461 7079 -963 1096 226 23 0 chr2 219269787 219270048 -31417806 + L1MC4 LINE L1 7238 7504 -538 1805 234 36 14 chr2 219270048 219270075 -31417779 - MER74A LTR ERVL 0 558 533 13486 142 37 15 chr2 219270075 219271223 -31416631 + Tigger1 DNA MER2_type 1 1122 -1296 2312 77 3 14 chr2 219271223 219271520 -31416334 + AluSq SINE Alu 1 294 -19 13486 142 37 15 chr2 219271520 219272737 -31415117 + Tigger1 DNA MER2_type 1122 2418 0 1805 234 36 14 chr2 219272737 219273127 -31414727 - MER74A LTR ERVL -25 533 132 16756 112 7 16 chr2 219273136 219276072 -31411782 + L1P3 LINE L1 748 3676 -2785 222 290 131 28 chr2 219277110 219277255 -31410599 - MIR SINE MIR -12 250 91 213 237 116 41 chr2 219277309 219277441 -31410413 - MIR SINE MIR -51 157 50 853 247 78 9 chr2 219277599 219277830 -31410024 + MIR SINE MIR 16 262 0 1837 246 23 34 chr2 219279803 219280140 -31407714 + L1ME3 LINE L1 5612 5942 -220 2291 94 3 0 chr2 219280140 219280439 -31407415 + AluSc SINE Alu 1 300 -9 1837 246 23 34 chr2 219280439 219280658 -31407196 + L1ME3 LINE L1 5942 6162 0 286 342 31 31 chr2 219280729 219280890 -31406964 + MIR SINE MIR 97 257 -5 255 299 124 7 chr2 219280858 219280995 -31406859 - MIR SINE MIR -10 252 100 * 572 248 80 35 chr2 219281320 219281644 -31406210 + LTR43 LTR ERV1 187 440 -46 236 375 10 10 chr2 219281704 219281800 -31406054 - MIR SINE MIR -164 98 3 410 271 88 53 chr2 219282181 219282351 -31405503 - MIR SINE MIR -30 232 57 2194 119 0 0 chr2 219282766 219283061 -31404793 + AluSx SINE Alu 3 297 -15 783 162 70 40 chr2 219283158 219283430 -31404424 - L1MC5 LINE L1 -223 7738 7459 3868 171 38 27 chr2 219283505 219284345 -31403509 - L1MA7 LINE L1 -91 6200 5352 47 33 0 0 chr2 219284345 219284406 -31403448 + AT_rich Low_complexity Low_complexity 1 61 0 1904 158 0 0 chr2 219284409 219284700 -31403154 - AluSx SINE Alu -21 291 1 11515 198 24 27 chr2 219284700 219285228 -31402626 - L1PA16 LINE L1 -11 6155 5627 2184 109 0 23 chr2 219285228 219285531 -31402323 - AluSx SINE Alu -16 296 1 11515 198 24 27 chr2 219285531 219286825 -31401029 - L1PA16 LINE L1 -539 5627 4332 2453 73 0 6 chr2 219286825 219287138 -31400716 + AluY SINE Alu 1 311 0 11515 198 24 27 chr2 219287138 219289062 -31398792 - L1PA16 LINE L1 -1834 4332 2423 300 326 0 0 chr2 219289162 219289260 -31398594 + L1PA12 LINE L1 2085 2182 -5399 428 125 10 39 chr2 219289390 219289494 -31398360 + (GAAA)n Simple_repeat Simple_repeat 2 102 0 1911 128 10 104 chr2 219290134 219290547 -31397307 - THE1C LTR MaLR 0 375 2 910 252 67 8 chr2 219291166 219291404 -31396450 - MIR SINE MIR -2 260 9 1949 199 19 7 chr2 219291451 219291873 -31395981 + L1MB7 LINE L1 5676 6102 -82 2322 87 6 13 chr2 219292277 219292589 -31395265 - AluSg SINE Alu 0 310 1 245 340 99 5 chr2 219292802 219293014 -31394840 - L2 LINE L2 -597 2717 2486 * 252 284 128 9 chr2 219293006 219293115 -31394739 + L2 LINE L2 3192 3313 0 2200 85 7 29 chr2 219293193 219293500 -31394354 - AluY SINE Alu -11 300 1 345 359 96 31 chr2 219293513 219293867 -31393987 - L2 LINE L2 -901 2413 2037 321 230 72 65 chr2 219294742 219294881 -31392973 - L2 LINE L2 -3 3310 3171 1056 320 74 8 chr2 219294927 219295321 -31392533 + L2 LINE L2 2868 3287 -26 592 366 64 20 chr2 219295456 219295959 -31391895 - L2 LINE L2 -355 2959 2435 492 301 74 12 chr2 219296299 219296462 -31391392 - MIR SINE MIR -82 180 8 2048 96 68 0 chr2 219297275 219297555 -31390299 - AluSc SINE Alu -10 299 1 1672 76 4 9 chr2 219298495 219298720 -31389134 + AluSc SINE Alu 86 309 0 277 266 120 51 chr2 219398771 219399045 -31288809 - L2 LINE L2 -1107 2207 1915 811 192 54 24 chr2 219399214 219399381 -31288473 + MIR SINE MIR 6 177 -85 4402 134 20 4 chr2 219399415 219400130 -31287724 - L1MA4 LINE L1 -86 6214 5489 242 284 15 0 chr2 219400167 219400234 -31287620 + MIR SINE MIR 170 237 -25 194 254 91 18 chr2 219400202 219400257 -31287597 + L2 LINE L2 3210 3268 -4 * 323 278 86 20 chr2 219400257 219400408 -31287446 + L1MC4a LINE L1 5723 5883 -1925 24 96 0 0 chr2 219400538 219400611 -31287243 + AT_rich Low_complexity Low_complexity 1 73 0 240 35 0 0 chr2 219402911 219402940 -31284914 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 1921 133 13 3 chr2 219403040 219403349 -31284505 - L1P4 LINE L1 -447 5719 5408 21 0 0 0 chr2 219403468 219403489 -31284365 + AT_rich Low_complexity Low_complexity 1 21 0 503 300 106 0 chr2 219405045 219405215 -31282639 + MIR SINE MIR 5 192 -70 28 29 0 0 chr2 219405236 219405271 -31282583 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr2 219405922 219405948 -31281906 + AT_rich Low_complexity Low_complexity 1 26 0 281 260 41 0 chr2 219406299 219406372 -31281482 + MLT1D LTR MaLR 12 87 -418 23 54 0 0 chr2 219406401 219406438 -31281416 + AT_rich Low_complexity Low_complexity 1 37 0 1346 237 91 25 chr2 219406438 219406834 -31281020 + MLT1D LTR MaLR 84 505 0 23 0 0 0 chr2 219409835 219409858 -31277996 + AT_rich Low_complexity Low_complexity 1 23 0 393 305 85 24 chr2 219410108 219410272 -31277582 - L2 LINE L2 0 3272 3099 200 255 10 88 chr2 219411250 219411352 -31276502 + MIR SINE MIR 74 167 -95 231 394 0 52 chr2 219411695 219411850 -31276004 - L2 LINE L2 -1 3271 3125 2373 66 3 3 chr2 219412728 219413029 -31274825 + AluY SINE Alu 1 301 -10 583 310 152 58 chr2 219413285 219414033 -31273821 - L2 LINE L2 -700 2614 1796 560 308 14 43 chr2 219414775 219414983 -31272871 - MIR SINE MIR -14 248 47 195 326 23 23 chr2 219415094 219415180 -31272674 - L2 LINE L2 -926 2388 2303 583 311 54 14 chr2 219415393 219415615 -31272239 - MIR SINE MIR -30 232 2 264 100 0 0 chr2 219416987 219417027 -31270827 + (TG)n Simple_repeat Simple_repeat 2 41 0 315 291 23 0 chr2 219419788 219419874 -31267980 - MIR SINE MIR -99 163 76 21 57 0 0 chr2 219420347 219420382 -31267472 + AT_rich Low_complexity Low_complexity 1 35 0 285 307 55 39 chr2 219421318 219421445 -31266409 - MIR SINE MIR -114 148 20 1054 184 44 0 chr2 219421894 219422100 -31265754 + MER82 DNA MER2_type 62 276 -377 374 306 25 0 chr2 219426807 219426928 -31260926 + MIR3 SINE MIR 74 197 -11 1605 122 0 0 chr2 219430816 219431030 -31256824 + AluSx SINE Alu 1 214 -98 339 344 50 12 chr2 219431232 219431392 -31256462 + MIR SINE MIR 97 262 0 1993 149 3 0 chr2 219431419 219431720 -31256134 - AluSx SINE Alu -10 302 1 7214 44 0 13 chr2 219431792 219432700 -31255154 + L1PA5 LINE L1 5257 6152 -2 337 327 29 68 chr2 219433445 219433723 -31254131 - ERVL LTR ERVL -4242 1522 1256 34 0 0 0 chr2 219433792 219433826 -31254028 + AT_rich Low_complexity Low_complexity 1 34 0 446 316 20 9 chr2 219434012 219434190 -31253664 - ERVL LTR ERVL -4737 956 736 326 305 21 28 chr2 219434690 219434831 -31253023 + MLT1I LTR MaLR 1 140 -269 2304 103 53 8 chr2 219435719 219436078 -31251776 + THE1C LTR MaLR 1 375 0 269 254 36 9 chr2 219436375 219436485 -31251369 + L1M4 LINE L1 2275 2387 -3759 2237 146 20 0 chr2 219436603 219436960 -31250894 - MER57B LTR ERV1 -70 364 1 1638 83 116 12 chr2 219436960 219437201 -31250653 - MER57B-int LTR ERV1 0 7537 7272 662 156 16 8 chr2 219437201 219437323 -31250531 - LTR54B LTR ERV1 -371 127 5 11660 110 39 36 chr2 219437323 219438127 -31249727 - MER57B-int LTR ERV1 -385 7152 6352 2211 121 0 3 chr2 219438127 219438424 -31249430 + AluSc SINE Alu 1 296 -13 369 0 0 0 chr2 219438426 219438467 -31249387 + (TA)n Simple_repeat Simple_repeat 2 42 0 11660 110 39 36 chr2 219438467 219439500 -31248354 - MER57B-int LTR ERV1 -1185 6352 5307 5802 198 85 27 chr2 219439503 219442128 -31245726 - MER57B-int LTR ERV1 -2231 2649 1554 3530 139 63 0 chr2 219442095 219442654 -31245200 - MER57B-int LTR ERV1 -5063 883 290 * 4204 147 23 3 chr2 219442651 219443312 -31244542 - MER57B-int LTR ERV1 -6863 674 1 528 45 216 0 chr2 219443324 219443412 -31244442 - MER57B LTR ERV1 -4 430 324 927 320 104 30 chr2 219443495 219444248 -31243606 + L1M4 LINE L1 2506 3313 -2833 278 98 0 131 chr2 219444560 219444621 -31243233 + MLT1A2 LTR MaLR 1 53 -321 933 248 37 70 chr2 219445870 219446354 -31241500 - MER34 LTR ERV1 -65 477 10 238 278 133 0 chr2 219446357 219446447 -31241407 - MIR SINE MIR -56 206 105 1365 281 62 64 chr2 219446480 219447029 -31240825 + L1M4b LINE L1 49 596 -6263 929 221 24 12 chr2 219447069 219447318 -31240536 + L1M4b LINE L1 3015 3266 -3691 325 294 0 22 chr2 219447343 219447435 -31240419 + L1MC4 LINE L1 6614 6703 -1339 564 193 57 7 chr2 219447438 219447578 -31240276 + L1M4b LINE L1 3253 3399 -3558 1052 131 49 193 chr2 219447609 219448059 -31239795 + L1MB7 LINE L1 5800 6184 0 253 346 19 19 chr2 219448083 219448190 -31239664 - MIR SINE MIR -142 120 14 1129 209 17 17 chr2 219448920 219449159 -31238695 + MER8 DNA MER2_type 1 239 0 575 225 62 0 chr2 219449437 219449566 -31238288 - MER63A DNA MER1_type 0 210 74 255 200 0 0 chr2 219449829 219449874 -31237980 - MER5A DNA MER1_type -138 51 7 338 151 0 0 chr2 219449876 219449929 -31237925 + MLT1J LTR MaLR 457 509 -2 571 341 52 37 chr2 219450341 219450748 -31237106 + LTR16C LTR ERVL 79 491 0 237 276 92 0 chr2 219450895 219450971 -31236883 - L2 LINE L2 -991 2323 2241 21 0 0 0 chr2 219451462 219451483 -31236371 + AT_rich Low_complexity Low_complexity 1 21 0 1820 88 7 85 chr2 219452101 219452396 -31235458 - AluY SINE Alu -3 308 37 264 30 0 0 chr2 219453319 219453352 -31234502 + (CA)n Simple_repeat Simple_repeat 2 34 0 329 330 17 8 chr2 219454387 219454505 -31233349 + MIR3 SINE MIR 76 194 -14 834 249 69 4 chr2 219454941 219455186 -31232668 + MIR SINE MIR 2 262 0 346 218 165 0 chr2 219456496 219456629 -31231225 - MER5C DNA MER1_type -2 322 168 207 0 0 0 chr2 219456938 219456961 -31230893 + (TG)n Simple_repeat Simple_repeat 2 24 0 568 118 140 0 chr2 219457006 219457099 -31230755 - AluSg/x SINE Alu -12 297 192 329 326 73 32 chr2 219457769 219457987 -31229867 + MIR SINE MIR 2 228 -34 568 276 43 51 chr2 219458228 219458482 -31229372 - MIR SINE MIR -8 254 3 547 161 0 0 chr2 219458531 219458612 -31229242 - Tigger7 DNA MER2_type 0 2487 2407 * 1369 231 46 0 chr2 219458605 219458886 -31228968 - Tigger7 DNA MER2_type -2193 294 1 273 287 115 0 chr2 219459073 219459160 -31228694 + MIR SINE MIR 117 213 -49 247 271 8 139 chr2 219459167 219459289 -31228565 - MIR SINE MIR -155 107 2 375 177 0 0 chr2 219459332 219459394 -31228460 - Tigger7 DNA MER2_type 0 2491 2430 28 79 0 0 chr2 219460027 219460090 -31227764 + AT_rich Low_complexity Low_complexity 1 63 0 289 206 62 151 chr2 219460419 219460565 -31227289 - MER5B DNA MER1_type -23 155 23 222 150 0 0 chr2 219461513 219461553 -31226301 + (CA)n Simple_repeat Simple_repeat 2 41 0 206 317 67 10 chr2 219463276 219463380 -31224474 + MIR SINE MIR 82 191 -71 204 226 36 12 chr2 219464165 219464249 -31223605 + (TTATA)n Simple_repeat Simple_repeat 5 90 0 24 0 0 0 chr2 219464458 219464482 -31223372 + AT_rich Low_complexity Low_complexity 1 24 0 243 125 0 0 chr2 219464540 219464580 -31223274 + (T)n Simple_repeat Simple_repeat 1 40 0 22 70 0 0 chr2 219466990 219467033 -31220821 + AT_rich Low_complexity Low_complexity 1 43 0 34 0 0 0 chr2 219467145 219467179 -31220675 + AT_rich Low_complexity Low_complexity 1 34 0 2114 106 7 0 chr2 219468561 219468868 -31218986 + AluSq SINE Alu 1 309 0 221 220 20 0 chr2 219469069 219469119 -31218735 + (TA)n Simple_repeat Simple_repeat 2 52 0 269 375 19 10 chr2 219471104 219471208 -31216646 - MIR SINE MIR -80 128 24 22 0 0 0 chr2 219471759 219471781 -31216073 + AT_rich Low_complexity Low_complexity 1 22 0 454 257 151 7 chr2 219472490 219472642 -31215212 + MER5A DNA MER1_type 9 182 -7 21 57 0 0 chr2 219472885 219472920 -31214934 + AT_rich Low_complexity Low_complexity 1 35 0 392 206 65 37 chr2 219473059 219473166 -31214688 + L1ME3A LINE L1 6037 6146 -24 608 244 81 84 chr2 219473432 219473777 -31214077 + MARNA DNA Mariner 223 566 -20 2142 70 0 11 chr2 219474499 219474769 -31213085 + AluY SINE Alu 1 267 -44 330 299 62 62 chr2 219475026 219475203 -31212651 - MER5B DNA MER1_type 0 178 2 255 133 0 0 chr2 219476237 219476282 -31211572 + (TTTTC)n Simple_repeat Simple_repeat 2 46 0 194 362 60 44 chr2 219476611 219476929 -31210925 - L2 LINE L2 -815 2499 2177 22 0 0 0 chr2 219477009 219477031 -31210823 + AT_rich Low_complexity Low_complexity 1 22 0 795 267 95 13 chr2 219478053 219478285 -31209569 + MIR SINE MIR 12 262 0 407 318 26 39 chr2 219478367 219478521 -31209333 + L3 LINE CR1 1425 1576 -1 214 209 45 0 chr2 219478641 219478708 -31209146 + GA-rich Low_complexity Low_complexity 3 72 0 231 287 66 56 chr2 219478909 219479107 -31208747 - L1ME LINE L1 -188 5933 5731 547 351 78 41 chr2 219479538 219480150 -31207704 + HERVL LTR ERVL 3 637 -4359 588 277 96 0 chr2 219480689 219480866 -31206988 + MLT1G1 LTR MaLR 8 201 -394 590 296 10 39 chr2 219480871 219480959 -31206895 + HERVL LTR ERVL 2717 2806 -2190 2411 15 0 0 chr2 219480959 219481228 -31206626 + AluY SINE Alu 39 307 -4 590 296 10 39 chr2 219481228 219481345 -31206509 + HERVL LTR ERVL 2806 2916 -2080 646 274 77 10 chr2 219481768 219482039 -31205815 + HERVL LTR ERVL 4080 4338 -1316 588 238 76 68 chr2 219482879 219483266 -31204588 - L1ME LINE L1 -463 5658 5257 1602 165 74 3 chr2 219484351 219484636 -31203218 + AluJb SINE Alu 1 305 -7 712 191 0 0 chr2 219485462 219485577 -31202277 + FLAM_A SINE Alu 1 115 -18 227 157 43 17 chr2 219485579 219485694 -31202160 + (TA)n Simple_repeat Simple_repeat 2 119 0 228 247 13 0 chr2 219485751 219485828 -31202026 + (TA)n Simple_repeat Simple_repeat 2 79 0 24 32 0 0 chr2 219486184 219486215 -31201639 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 219486987 219487008 -31200846 + AT_rich Low_complexity Low_complexity 1 21 0 285 310 101 53 chr2 219487748 219488125 -31199729 - L1ME4a LINE L1 -227 5894 5500 1316 173 133 26 chr2 219488265 219488617 -31199237 + MLT1B LTR MaLR 1 390 0 213 39 0 0 chr2 219488699 219488725 -31199129 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2470 19 13 13 chr2 219488744 219489051 -31198803 + AluYb8 SINE Alu 1 307 -11 1424 152 28 59 chr2 219489051 219489340 -31198514 - AluJo SINE Alu -31 281 1 271 274 99 72 chr2 219489362 219489599 -31198255 - L1ME4a LINE L1 -1174 4972 4743 2657 33 0 0 chr2 219489599 219489906 -31197948 + AluY SINE Alu 1 307 -4 271 274 99 72 chr2 219489906 219490211 -31197643 - L1ME4a LINE L1 -1403 4743 4415 708 253 65 35 chr2 219491464 219491693 -31196161 - MIR SINE MIR -6 256 21 662 91 0 10 chr2 219493044 219493143 -31194711 + L1MA2 LINE L1 6207 6304 0 254 135 39 0 chr2 219494738 219494790 -31193064 + (TATG)n Simple_repeat Simple_repeat 2 55 0 992 280 133 30 chr2 219494840 219495337 -31192517 + L2 LINE L2 2163 2710 -604 546 229 83 13 chr2 219495509 219495666 -31192188 + L2 LINE L2 3122 3289 -24 417 39 0 0 chr2 219495668 219495719 -31192135 + (TGGA)n Simple_repeat Simple_repeat 4 54 0 456 380 151 15 chr2 219495795 219496482 -31191372 - L2 LINE L2 -493 2821 2041 552 318 12 6 chr2 219497177 219497347 -31190507 - MIR SINE MIR 0 262 92 34 65 0 0 chr2 219497978 219498040 -31189814 + AT_rich Low_complexity Low_complexity 1 62 0 883 205 57 104 chr2 219498545 219498881 -31188973 + L1MD2 LINE L1 6038 6357 -2 561 279 37 11 chr2 219499043 219499233 -31188621 - MIR SINE MIR 0 262 68 2202 116 0 0 chr2 219499321 219499631 -31188223 - AluSg SINE Alu 0 310 1 197 179 77 0 chr2 219499910 219499949 -31187905 - L2 LINE L2 -90 3182 3141 28 29 0 0 chr2 219500014 219500049 -31187805 + AT_rich Low_complexity Low_complexity 1 35 0 274 328 45 30 chr2 219500092 219500290 -31187564 - MLT1K LTR MaLR -48 540 340 3020 130 63 24 chr2 219503135 219503482 -31184372 + MLT2B2 LTR ERVL 1 374 -141 1466 179 133 0 chr2 219503482 219503784 -31184070 + MER2 DNA MER2_type 2 343 -1 3020 130 63 24 chr2 219503784 219503930 -31183924 + MLT2B2 LTR ERVL 374 513 -2 301 132 0 44 chr2 219504724 219504792 -31183062 + L1MD3 LINE L1 7931 7995 0 525 280 66 11 chr2 219505398 219505580 -31182274 + Charlie7 DNA MER1_type 1 192 -2420 400 290 9 9 chr2 219505931 219506038 -31181816 + Charlie7 DNA MER1_type 187 293 -2319 1309 247 93 46 chr2 219506167 219506732 -31181122 + Charlie7 DNA MER1_type 1650 2250 -362 1972 147 3 0 chr2 219506732 219507025 -31180829 - AluJb SINE Alu -18 294 1 1309 247 93 46 chr2 219507025 219507094 -31180760 + Charlie7 DNA MER1_type 2250 2314 -298 250 128 90 51 chr2 219507172 219507250 -31180604 + MLT1J2 LTR MaLR 370 450 0 3862 208 61 50 chr2 219508260 219508950 -31178904 - MER45B DNA AcHobo -542 1039 358 1647 136 102 15 chr2 219508950 219509215 -31178639 - AluJb SINE Alu -17 295 8 3862 208 61 50 chr2 219509215 219509441 -31178413 - MER45B DNA AcHobo -1223 358 109 2092 116 10 7 chr2 219509441 219509743 -31178111 + AluSx SINE Alu 1 303 -9 3862 208 61 50 chr2 219509743 219509812 -31178042 - MER45B DNA AcHobo -1472 109 42 345 262 193 64 chr2 219509912 219510114 -31177740 + MLT1J2 LTR MaLR 24 251 -199 209 313 132 26 chr2 219510549 219510776 -31177078 + L2 LINE L2 3024 3274 -39 1512 170 73 16 chr2 219510827 219511144 -31176710 - MER2 DNA MER2_type -10 335 1 26 0 0 0 chr2 219513154 219513180 -31174674 + AT_rich Low_complexity Low_complexity 1 26 0 29 28 0 0 chr2 219513764 219513800 -31174054 + AT_rich Low_complexity Low_complexity 1 36 0 1133 177 4 46 chr2 219515176 219515413 -31172441 + AluJo SINE Alu 84 310 -2 396 254 40 98 chr2 219515551 219515775 -31172079 - MIR SINE MIR -21 241 31 21 0 0 0 chr2 219515851 219515872 -31171982 + AT_rich Low_complexity Low_complexity 1 21 0 248 348 17 34 chr2 219516445 219516563 -31171291 + MIR3 SINE MIR 3 118 -90 447 308 8 23 chr2 219516628 219516777 -31171077 - MIR3 SINE MIR -44 164 18 244 147 0 44 chr2 219517007 219517075 -31170779 + (TATATG)n Simple_repeat Simple_repeat 6 70 0 259 194 0 16 chr2 219517082 219517144 -31170710 - L1ME LINE L1 -346 5816 5756 474 281 83 25 chr2 219517146 219517388 -31170466 + MER112 DNA MER1_type 1 256 0 2051 133 20 0 chr2 219518816 219519118 -31168736 + AluSx SINE Alu 1 308 -4 533 250 15 0 chr2 219519171 219519303 -31168551 + MER94 DNA DNA 1 134 0 513 274 110 36 chr2 219522293 219522512 -31165342 + MIR SINE MIR 5 239 -23 197 261 0 113 chr2 219523691 219523806 -31164048 + L2 LINE L2 1897 1998 -1316 54 62 0 0 chr2 219525050 219525146 -31162708 + AT_rich Low_complexity Low_complexity 1 96 0 305 284 21 21 chr2 219525351 219525446 -31162408 - L2 LINE L2 0 3313 3219 2044 110 3 17 chr2 219525763 219526062 -31161792 + AluSx SINE Alu 1 295 -17 352 280 10 0 chr2 219530651 219530751 -31157103 + (CG)n Simple_repeat Simple_repeat 1 101 0 256 23 0 47 chr2 219530762 219530805 -31157049 + (CCG)n Simple_repeat Simple_repeat 2 42 0 381 123 0 0 chr2 219532004 219532069 -31155785 + (GGA)n Simple_repeat Simple_repeat 1 65 0 210 267 0 0 chr2 219532387 219532432 -31155422 + T-rich Low_complexity Low_complexity 5 49 0 186 71 0 0 chr2 219533389 219533417 -31154437 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 32 26 0 0 chr2 219537311 219537350 -31150504 + AT_rich Low_complexity Low_complexity 1 39 0 35 63 0 0 chr2 219538117 219538180 -31149674 + AT_rich Low_complexity Low_complexity 1 63 0 215 308 13 26 chr2 219538440 219538518 -31149336 - MIR SINE MIR -89 173 97 305 256 149 16 chr2 219539663 219539784 -31148070 - MIR SINE MIR -14 248 112 991 232 62 5 chr2 219539798 219540022 -31147832 + MIR SINE MIR 13 249 -13 458 344 126 45 chr2 219540655 219541572 -31146282 - L2 LINE L2 -1 3271 2270 36 53 0 0 chr2 219542140 219542197 -31145657 + AT_rich Low_complexity Low_complexity 1 57 0 282 226 48 0 chr2 219542429 219542491 -31145363 - L2 LINE L2 -2 3311 3247 244 239 28 28 chr2 219543901 219543972 -31143882 + L2 LINE L2 3201 3271 -1 27 29 0 0 chr2 219545431 219545465 -31142389 + AT_rich Low_complexity Low_complexity 1 34 0 2106 125 3 6 chr2 219546083 219546434 -31141420 - AluSx SINE Alu 0 350 1 1760 83 19 19 chr2 219546444 219546708 -31141146 - AluSg SINE Alu -1 309 46 1491 187 42 35 chr2 219546807 219547117 -31140737 - AluJo SINE Alu 0 312 1 293 0 0 26 chr2 219548779 219548817 -31139037 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1620 128 128 4 chr2 219548821 219549072 -31138782 - AluSx SINE Alu -30 282 1 367 273 98 21 chr2 219549167 219549310 -31138544 + MIR SINE MIR 84 237 -25 212 340 43 64 chr2 219550215 219550356 -31137498 + L2 LINE L2 3102 3239 -33 431 256 68 0 chr2 219550387 219550504 -31137350 + MIR SINE MIR 113 237 -25 232 233 0 50 chr2 219550534 219550594 -31137260 + L2 LINE L2 3246 3302 -11 1311 321 50 21 chr2 219552752 219553427 -31134427 + L2 LINE L2 2486 3189 -124 1939 103 0 84 chr2 219553691 219554002 -31133852 + AluSx SINE Alu 1 305 0 181 0 0 0 chr2 219554002 219554022 -31133832 + (CAA)n Simple_repeat Simple_repeat 2 180 0 198 328 0 15 chr2 219554102 219554169 -31133685 + MIR SINE MIR 13 78 -184 454 276 55 25 chr2 219554206 219554369 -31133485 + MIR SINE MIR 64 231 -31 21 57 0 0 chr2 219554664 219554699 -31133155 + AT_rich Low_complexity Low_complexity 1 35 0 574 273 91 44 chr2 219556837 219557247 -31130607 - L1ME LINE L1 -309 5812 5374 435 141 0 0 chr2 219558336 219558414 -31129440 + (TG)n Simple_repeat Simple_repeat 1 78 0 664 298 62 14 chr2 219558474 219558682 -31129172 - L3 LINE CR1 -23 1554 1337 183 42 0 0 chr2 219558934 219558958 -31128896 + (CAAAC)n Simple_repeat Simple_repeat 3 26 0 979 56 0 0 chr2 219559026 219559152 -31128702 - L1PA5 LINE L1 -2 6152 6027 1256 150 19 5 chr2 219561682 219561889 -31125965 + AluJb SINE Alu 86 295 -17 369 380 79 40 chr2 219562115 219562544 -31125310 + L2 LINE L2 2825 3270 -2 295 233 0 0 chr2 219564607 219564667 -31123187 + L1MD2 LINE L1 6067 6126 -233 826 248 43 9 chr2 219565168 219565378 -31122476 + MIR SINE MIR 46 262 0 29 47 0 0 chr2 219565716 219565759 -31122095 + AT_rich Low_complexity Low_complexity 1 43 0 1663 178 0 14 chr2 219565888 219566181 -31121673 - AluJb SINE Alu -19 293 5 291 218 55 0 chr2 219566203 219566258 -31121596 - MIR SINE MIR -20 242 185 2210 105 10 0 chr2 219567760 219568064 -31119790 - AluSc SINE Alu -2 307 1 640 247 155 0 chr2 219569801 219569975 -31117879 - MIR SINE MIR -56 206 6 842 196 12 17 chr2 219570089 219570262 -31117592 + FRAM SINE Alu 1 171 -5 338 233 12 23 chr2 219570326 219570412 -31117442 - MER112 DNA MER1_type -175 85 1 615 324 61 17 chr2 219570811 219571284 -31116570 + L1MC4a LINE L1 3796 4289 -1857 354 313 91 33 chr2 219571436 219571679 -31116175 + L1MC4a LINE L1 4984 5240 -906 738 298 45 14 chr2 219571696 219571988 -31115866 + L1MC4a LINE L1 5259 5559 -2249 813 232 84 28 chr2 219572000 219572284 -31115570 + L1MC4a LINE L1 5598 5897 -1911 306 333 155 0 chr2 219572345 219572552 -31115302 + L1MC4a LINE L1 5990 6228 -1580 384 297 134 38 chr2 219573081 219573264 -31114590 + MIR SINE MIR 30 224 -38 587 271 65 17 chr2 219573564 219573915 -31113939 + L1ME4a LINE L1 5754 6121 0 22 35 0 0 chr2 219574350 219574379 -31113475 + AT_rich Low_complexity Low_complexity 1 29 0 30 0 0 0 chr2 219575744 219575774 -31112080 + AT_rich Low_complexity Low_complexity 1 30 0 1618 158 22 38 chr2 219576008 219576325 -31111529 - AluJo SINE Alu 0 312 1 201 74 0 0 chr2 219578393 219578420 -31109434 + (T)n Simple_repeat Simple_repeat 1 27 0 284 296 105 35 chr2 219579480 219579652 -31108202 + MIR SINE MIR 75 258 -4 23 54 0 0 chr2 219581047 219581084 -31106770 + AT_rich Low_complexity Low_complexity 1 37 0 257 75 25 0 chr2 219581624 219581664 -31106190 + (TC)n Simple_repeat Simple_repeat 2 42 0 316 222 421 5 chr2 219582337 219582553 -31105301 + MER5C DNA MER1_type 2 307 -17 444 272 158 11 chr2 219582782 219582966 -31104888 - MIR SINE MIR 0 262 52 637 256 29 23 chr2 219584439 219584611 -31103243 + MER5B DNA MER1_type 3 175 -3 21 0 0 0 chr2 219585322 219585343 -31102511 + AT_rich Low_complexity Low_complexity 1 21 0 29 70 0 0 chr2 219585382 219585439 -31102415 + AT_rich Low_complexity Low_complexity 1 57 0 459 283 137 26 chr2 219585859 219586166 -31101688 + L1ME4a LINE L1 5527 5867 -254 194 276 161 23 chr2 219587256 219587343 -31100511 - MER5B DNA MER1_type -77 101 3 28 71 0 0 chr2 219587362 219587418 -31100436 + AT_rich Low_complexity Low_complexity 1 56 0 602 308 122 61 chr2 219588955 219589533 -31098321 - L2 LINE L2 -1 3312 2702 1587 187 17 24 chr2 219590353 219590642 -31097212 + AluJo SINE Alu 1 287 -25 243 58 58 43 chr2 219590672 219590741 -31097113 + (TAAA)n Simple_repeat Simple_repeat 3 72 0 345 47 0 0 chr2 219590753 219590796 -31097058 + (CA)n Simple_repeat Simple_repeat 2 44 0 843 326 145 8 chr2 219591079 219591471 -31096383 - L3 LINE CR1 -815 762 317 2130 171 11 13 chr2 219591707 219592082 -31095772 - MLT1C LTR MaLR 0 467 94 198 263 0 49 chr2 219593127 219593216 -31094638 - L2 LINE L2 -360 2912 2839 203 284 74 0 chr2 219593219 219593300 -31094554 - L2 LINE L2 -605 2709 2623 1628 228 27 73 chr2 219593477 219594000 -31093854 + MLT2B1 LTR ERVL 22 520 0 230 311 57 16 chr2 219594183 219594305 -31093549 - MER117 DNA MER1_type -62 135 9 235 248 168 40 chr2 219595296 219595397 -31092457 - L2 LINE L2 0 3313 3200 26 0 0 0 chr2 219596558 219596584 -31091270 + AT_rich Low_complexity Low_complexity 1 26 0 470 338 19 19 chr2 219597710 219597920 -31089934 + MIR SINE MIR 48 257 -5 1801 142 7 27 chr2 219598762 219599058 -31088796 + AluSx SINE Alu 1 290 -22 548 314 27 11 chr2 219599211 219599396 -31088458 - MIR SINE MIR -71 191 4 323 363 144 36 chr2 219602786 219603092 -31084762 - L2 LINE L2 0 3272 2934 396 355 48 30 chr2 219603534 219603765 -31084089 - MIR SINE MIR -6 256 22 2994 111 65 43 chr2 219603871 219604208 -31083646 - MER1A DNA MER1_type -2179 523 170 2209 82 22 57 chr2 219604208 219604525 -31083329 + AluSp SINE Alu 1 306 -7 2994 111 65 43 chr2 219604525 219604699 -31083155 - MER1A DNA MER1_type -2532 170 1 210 421 33 0 chr2 219605583 219605704 -31082150 + L2 LINE L2 3137 3261 -11 187 377 96 14 chr2 219606211 219606357 -31081497 + L2 LINE L2 2906 3063 -209 261 0 0 0 chr2 219607701 219607730 -31080124 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 666 196 9 9 chr2 219608321 219608540 -31079314 + CT-rich Low_complexity Low_complexity 1 219 0 1339 215 19 0 chr2 219608550 219608810 -31079044 - AluJo SINE Alu -47 265 1 442 262 24 43 chr2 219609303 219609467 -31078387 + MIR SINE MIR 57 217 -45 2541 55 0 3 chr2 219610024 219610331 -31077523 + AluY SINE Alu 1 306 -5 992 82 7 0 chr2 219610980 219611126 -31076728 - AluY SINE Alu 0 311 165 256 156 0 0 chr2 219612521 219612566 -31075288 - MADE1 DNA Mariner -35 45 1 1288 165 121 48 chr2 219613375 219613690 -31074164 + MER7A DNA MER2_type 1 336 -10 598 101 0 11 chr2 219614109 219614198 -31073656 + AluSc SINE Alu 206 293 -16 328 275 84 30 chr2 219616310 219616441 -31071413 + L2 LINE L2 3176 3313 0 181 299 104 0 chr2 219616836 219616913 -31070941 + MIR SINE MIR 113 197 -65 181 367 220 0 chr2 219617241 219617350 -31070504 + L2 LINE L2 3136 3268 -4 315 0 0 0 chr2 219618963 219618998 -31068856 + (TG)n Simple_repeat Simple_repeat 2 36 0 205 239 60 75 chr2 219619498 219619565 -31068289 - MIR SINE MIR -61 147 82 383 215 151 0 chr2 219620173 219620266 -31067588 + L2 LINE L2 3160 3266 -6 595 304 73 15 chr2 219620700 219620904 -31066950 - MIR SINE MIR -45 217 2 180 0 0 0 chr2 219621193 219621213 -31066641 + (CAA)n Simple_repeat Simple_repeat 2 21 0 563 301 24 7 chr2 219622121 219622353 -31065501 + MIR SINE MIR 20 256 -6 218 311 132 0 chr2 219622474 219622580 -31065274 - L2 LINE L2 -3 3310 3191 289 396 36 36 chr2 219622809 219623140 -31064714 - L2 LINE L2 -404 2910 2580 198 103 0 0 chr2 219624330 219624359 -31063495 + (TTA)n Simple_repeat Simple_repeat 1 29 0 259 331 23 23 chr2 219624435 219624568 -31063286 - MIR SINE MIR -60 148 16 28 0 0 0 chr2 219625407 219625435 -31062419 + AT_rich Low_complexity Low_complexity 1 28 0 29 47 0 0 chr2 219625783 219625826 -31062028 + AT_rich Low_complexity Low_complexity 1 43 0 552 274 89 24 chr2 219628596 219628858 -31058996 + L1MC/D LINE L1 5192 5469 -743 239 267 35 12 chr2 219628879 219628965 -31058889 + L1MC/D LINE L1 5709 5796 -2012 189 226 0 57 chr2 219629377 219629430 -31058424 - MIR SINE MIR -61 201 152 429 200 0 0 chr2 219629449 219629534 -31058320 - MIR SINE MIR -49 213 129 333 366 105 6 chr2 219632092 219632264 -31055590 - MIR3 SINE MIR -14 194 6 328 278 30 30 chr2 219632297 219632430 -31055424 + MARNA DNA Mariner 11 143 -443 288 236 79 31 chr2 219632537 219632664 -31055190 - MARNA DNA Mariner -300 286 154 23 33 0 0 chr2 219632965 219632995 -31054859 + AT_rich Low_complexity Low_complexity 1 30 0 1962 120 32 0 chr2 219633657 219633940 -31053914 - AluSx SINE Alu -20 292 1 21 0 0 0 chr2 219634539 219634560 -31053294 + AT_rich Low_complexity Low_complexity 1 21 0 315 320 92 26 chr2 219637348 219637501 -31050353 + MIR3 SINE MIR 31 193 -15 327 356 62 16 chr2 219637516 219637710 -31050144 + MIR SINE MIR 6 208 -54 23 33 0 0 chr2 219638452 219638482 -31049372 + AT_rich Low_complexity Low_complexity 1 30 0 2492 319 80 27 chr2 219640242 219642818 -31045036 - ERVL LTR ERVL -751 5013 2271 480 160 11 21 chr2 219642820 219642914 -31044940 + MER33 DNA MER1_type 1 93 -231 250 146 0 0 chr2 219642928 219642969 -31044885 + L1MA10 LINE L1 6286 6326 -8 1209 272 140 19 chr2 219643509 219643972 -31043882 - LTR33 LTR ERVL -2 519 1 1922 164 9 23 chr2 219644019 219644361 -31043493 + MER1B DNA MER1_type 1 337 0 216 0 0 0 chr2 219644703 219644727 -31043127 + (TG)n Simple_repeat Simple_repeat 2 25 0 182 314 0 0 chr2 219644861 219644912 -31042942 - MIR SINE MIR -13 249 199 37 39 0 0 chr2 219645018 219645069 -31042785 + AT_rich Low_complexity Low_complexity 1 51 0 208 247 164 0 chr2 219645619 219645692 -31042162 - MIR SINE MIR -171 91 7 275 304 16 96 chr2 219645756 219645881 -31041973 + MIR3 SINE MIR 8 122 -86 207 0 0 0 chr2 219646001 219646024 -31041830 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1619 107 0 0 chr2 219646309 219646525 -31041329 + AluY SINE Alu 1 216 -95 2337 82 0 0 chr2 219646779 219647071 -31040783 - AluSx SINE Alu -16 296 5 1326 86 5 43 chr2 219647529 219647739 -31040115 + L1PA13 LINE L1 5958 6159 -4 23 0 0 0 chr2 219648886 219648909 -31038945 + AT_rich Low_complexity Low_complexity 1 23 0 2240 97 7 3 chr2 219649552 219649862 -31037992 + AluY SINE Alu 1 311 0 229 306 0 16 chr2 219651961 219652023 -31035831 - MIR SINE MIR -194 68 8 * 481 295 107 21 chr2 219652020 219652254 -31035600 + L2 LINE L2 2649 2902 -412 210 308 105 69 chr2 219652300 219652547 -31035307 + L2 LINE L2 2966 3221 -92 342 286 9 9 chr2 219652553 219652658 -31035196 - L2 LINE L2 -97 3216 3112 267 327 35 9 chr2 219652664 219652777 -31035077 - MIR SINE MIR -12 250 135 13399 137 26 8 chr2 219653004 219655170 -31032684 + Tigger1 DNA MER2_type 1 2205 -213 1446 156 0 63 chr2 219655189 219655459 -31032395 - AluJb SINE Alu -59 253 1 915 179 118 5 chr2 219655459 219655654 -31032200 + Tigger1 DNA MER2_type 2200 2416 -2 266 345 76 0 chr2 219656934 219657053 -31030801 + MIR SINE MIR 2 129 -133 401 368 8 0 chr2 219657094 219657211 -31030643 + L2 LINE L2 3149 3266 -6 371 346 87 30 chr2 219657266 219657497 -31030357 + L2 LINE L2 2715 2958 -356 614 224 82 7 chr2 219657728 219657875 -31029979 + MLT2E LTR ERVL 469 626 -2 2128 290 30 48 chr2 219658200 219658477 -31029377 + ERVL LTR ERVL 1058 1338 -4426 2226 74 0 10 chr2 219658477 219658775 -31029079 - AluY SINE Alu -16 295 1 2128 290 30 48 chr2 219658775 219659360 -31028494 + ERVL LTR ERVL 1338 1905 -3859 2212 97 0 25 chr2 219659483 219659802 -31028052 + AluSx SINE Alu 1 311 -1 237 236 0 109 chr2 219659936 219660046 -31027808 + MER103 DNA DNA 20 117 -49 1098 202 4 40 chr2 219660720 219660992 -31026862 - MER119 DNA MER1_type 0 583 322 3211 238 192 26 chr2 219661007 219662567 -31025287 + L1M4 LINE L1 3191 5009 -1137 876 271 112 46 chr2 219662762 219663665 -31024189 + HAL1 LINE L1 1407 2507 0 21 36 0 0 chr2 219663978 219664006 -31023848 + AT_rich Low_complexity Low_complexity 1 28 0 267 349 71 38 chr2 219664602 219664969 -31022885 - L2 LINE L2 -666 2648 2270 189 317 122 24 chr2 219664971 219665094 -31022760 - L2 LINE L2 -6 3307 3173 24 32 0 0 chr2 219665614 219665645 -31022209 + AT_rich Low_complexity Low_complexity 1 31 0 275 320 167 29 chr2 219665980 219666286 -31021568 + L2 LINE L2 2964 3311 -2 22 0 0 0 chr2 219669350 219669372 -31018482 + AT_rich Low_complexity Low_complexity 1 22 0 2146 130 0 0 chr2 219669372 219669679 -31018175 - AluSx SINE Alu -5 307 1 22 0 0 0 chr2 219669892 219669914 -31017940 + AT_rich Low_complexity Low_complexity 1 22 0 1389 276 58 7 chr2 219672788 219673205 -31014649 + L2 LINE L2 1538 1975 -1339 185 339 0 0 chr2 219673259 219673321 -31014533 + L2 LINE L2 2199 2260 -1054 2356 74 0 0 chr2 219673543 219673866 -31013988 - AluY SINE Alu 0 311 1 1190 138 0 5 chr2 219674656 219674845 -31013009 + L1PB1 LINE L1 5932 6119 -32 286 344 48 82 chr2 219675196 219675487 -31012367 - L2 LINE L2 -1 3271 2991 28 0 0 0 chr2 219675997 219676025 -31011829 + AT_rich Low_complexity Low_complexity 1 28 0 289 415 136 7 chr2 219676381 219676675 -31011179 - L2 LINE L2 -6 3266 2935 235 380 0 19 chr2 219676938 219677046 -31010808 - L2 LINE L2 -984 2330 2225 189 317 32 57 chr2 219677182 219677305 -31010549 - L2 LINE L2 -1302 2012 1893 813 240 83 8 chr2 219677952 219678194 -31009660 + MIR SINE MIR 3 262 0 1643 148 92 0 chr2 219681957 219682228 -31005626 + AluSx SINE Alu 1 296 -16 23 0 0 0 chr2 219683226 219683249 -31004605 + AT_rich Low_complexity Low_complexity 1 23 0 671 114 84 23 chr2 219687467 219687598 -31000256 - MER85 DNA T2_type 0 139 1 23 0 0 0 chr2 219688453 219688476 -30999378 + AT_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr2 219688619 219688648 -30999206 + AT_rich Low_complexity Low_complexity 1 29 0 1057 337 77 50 chr2 219688804 219689894 -30997960 + L2 LINE L2 921 2039 -1275 1269 305 109 19 chr2 219689918 219690387 -30997467 - MER115 DNA AcHobo 0 693 183 330 268 168 26 chr2 219690530 219690720 -30997134 + L2 LINE L2 2125 2341 -973 21 0 0 0 chr2 219693925 219693946 -30993908 + AT_rich Low_complexity Low_complexity 1 21 0 225 65 0 0 chr2 219694348 219694379 -30993475 + (TA)n Simple_repeat Simple_repeat 1 31 0 1870 276 75 24 chr2 219694736 219695366 -30992488 + ERVL-E LTR ERVL 1851 2512 -2973 515 101 0 22 chr2 219695367 219695456 -30992398 + (TAGA)n Simple_repeat Simple_repeat 4 90 0 919 296 38 6 chr2 219695501 219695815 -30992039 + ERVL-E LTR ERVL 2611 2934 -2830 354 265 82 7 chr2 219695792 219695939 -30991915 + ERVL-E LTR ERVL 5607 5764 0 * 641 277 53 21 chr2 219695978 219696166 -30991688 + MLT2E LTR ERVL 66 259 -369 289 345 115 14 chr2 219696360 219696499 -30991355 - MIR3 SINE MIR -41 167 15 201 308 128 8 chr2 219696556 219696673 -30991181 - MIR SINE MIR -46 216 86 232 264 136 7 chr2 219697253 219697393 -30990461 + L1MC4a LINE L1 5350 5507 -2301 292 356 80 3 chr2 219697413 219697725 -30990129 + L1MC4a LINE L1 5553 5888 -1920 1980 155 3 19 chr2 219697909 219698225 -30989629 - AluSx SINE Alu -1 311 1 217 352 42 0 chr2 219698724 219698795 -30989059 + MIR SINE MIR 20 93 -115 232 326 47 12 chr2 219698941 219699027 -30988827 + L2 LINE L2 3225 3313 0 233 390 52 15 chr2 219702669 219702805 -30985049 - MIR3 SINE MIR -62 146 6 230 154 0 58 chr2 219703685 219703737 -30984117 + (CACCC)n Simple_repeat Simple_repeat 3 51 0 479 69 14 0 chr2 219704993 219705065 -30982789 + (TTTA)n Simple_repeat Simple_repeat 1 73 0 2051 112 0 0 chr2 219705067 219705343 -30982511 - AluSx SINE Alu -36 276 1 364 324 37 107 chr2 219706423 219706778 -30981076 - L2 LINE L2 -18 3254 2925 850 318 104 30 chr2 219706882 219707480 -30980374 - L2 LINE L2 -428 2886 2243 378 0 0 0 chr2 219707480 219707522 -30980332 + (CA)n Simple_repeat Simple_repeat 1 42 0 420 188 160 83 chr2 219707534 219707678 -30980176 - Tigger3(Golem) DNA MER2_type -1 3028 2874 680 175 0 0 chr2 219707813 219707916 -30979938 - Tigger3(Golem) DNA MER2_type -2925 104 2 1790 172 0 3 chr2 219708142 219708445 -30979409 + AluJo SINE Alu 11 312 0 21 36 0 0 chr2 219709413 219709441 -30978413 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 219709615 219709637 -30978217 + AT_rich Low_complexity Low_complexity 1 22 0 1164 140 59 56 chr2 219709638 219709924 -30977930 - MER33 DNA MER1_type 0 324 38 405 301 67 43 chr2 219709980 219710189 -30977665 - MIR SINE MIR 0 262 49 225 216 60 9 chr2 219710194 219710310 -30977544 + (TTATA)n Simple_repeat Simple_repeat 4 125 0 222 321 118 37 chr2 219710800 219710987 -30976867 - L2 LINE L2 -411 2903 2702 461 307 62 30 chr2 219711061 219711269 -30976585 - MIR SINE MIR -48 214 3 331 275 11 11 chr2 219711972 219712063 -30975791 - MIR3 SINE MIR -5 203 113 855 263 54 0 chr2 219713471 219713676 -30974178 + MIR SINE MIR 41 256 -6 21 0 0 0 chr2 219714590 219714611 -30973243 + GC_rich Low_complexity Low_complexity 1 21 0 5120 123 36 32 chr2 219715637 219716507 -30971347 - L1MB1 LINE L1 -3 6165 5293 953 289 50 35 chr2 219716867 219717289 -30970565 + LTR16B LTR ERVL 37 464 0 546 278 49 41 chr2 219717290 219717556 -30970298 + L2 LINE L2 1712 1979 -1335 832 269 75 0 chr2 219717621 219717822 -30970032 + MIR SINE MIR 14 229 -33 306 125 0 0 chr2 219717834 219717882 -30969972 + (CAT)n Simple_repeat Simple_repeat 3 50 0 683 297 249 33 chr2 219717882 219718461 -30969393 + L2 LINE L2 2019 2722 -592 1437 157 78 0 chr2 219718469 219718625 -30969229 - AluJo SINE Alu -16 296 113 279 0 0 0 chr2 219718625 219718656 -30969198 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1437 157 78 0 chr2 219718656 219718741 -30969113 - AluJo SINE Alu -199 113 36 365 174 21 14 chr2 219718929 219719052 -30968802 - AluJ/FRAM SINE Alu -21 281 232 865 316 62 36 chr2 219719053 219719474 -30968380 + L2 LINE L2 2882 3313 0 186 304 29 14 chr2 219719489 219719558 -30968296 - L2 LINE L2 -559 2755 2686 21 95 0 0 chr2 219719880 219719943 -30967911 + AT_rich Low_complexity Low_complexity 1 63 0 306 290 75 11 chr2 219720247 219720340 -30967514 - MIR SINE MIR -148 114 16 252 0 0 0 chr2 219720900 219720928 -30966926 + (A)n Simple_repeat Simple_repeat 1 28 0 1640 274 178 14 chr2 219721073 219722060 -30965794 - L2 LINE L2 0 3313 2170 809 242 78 14 chr2 219722069 219722288 -30965566 - MIR SINE MIR -2 260 28 308 234 26 0 chr2 219722578 219722655 -30965199 - HsTC2 DNA Tc2 -1818 80 2 479 181 57 0 chr2 219723349 219723454 -30964400 + L1MB4 LINE L1 6067 6177 -3 367 262 117 15 chr2 219723963 219724122 -30963732 + MIR SINE MIR 19 184 -62 210 246 35 18 chr2 219725752 219725809 -30962045 + L2 LINE L2 3215 3272 0 216 191 0 0 chr2 219725817 219725859 -30961995 + (TGAA)n Simple_repeat Simple_repeat 2 43 0 21 82 0 0 chr2 219727704 219727753 -30960101 + AT_rich Low_complexity Low_complexity 1 49 0 2289 95 14 0 chr2 219728015 219728311 -30959543 - AluSq SINE Alu -13 300 1 216 316 0 98 chr2 219729242 219729375 -30958479 + MIR3 SINE MIR 88 207 -1 1707 190 76 78 chr2 219732692 219732942 -30954912 - MLT1D LTR MaLR 0 505 255 1807 45 5 0 chr2 219732942 219733163 -30954691 - AluY SINE Alu -89 222 1 1707 190 76 78 chr2 219733163 219733401 -30954453 - MLT1D LTR MaLR -250 255 18 192 40 0 0 chr2 219734146 219734171 -30953683 + (T)n Simple_repeat Simple_repeat 1 25 0 843 233 24 24 chr2 219734610 219734820 -30953034 + MER63A DNA MER1_type 1 210 0 1008 296 141 68 chr2 219735383 219736028 -30951826 + MER115 DNA AcHobo 1 692 -1 219 69 0 0 chr2 219736041 219736070 -30951784 + (T)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr2 219737543 219737565 -30950289 + AT_rich Low_complexity Low_complexity 1 22 0 2227 116 0 7 chr2 219737608 219737918 -30949936 + AluSx SINE Alu 1 308 -4 284 284 99 11 chr2 219737922 219738191 -30949663 - L1MC4a LINE L1 -89 6032 5733 245 276 0 0 chr2 219738200 219738258 -30949596 - L2 LINE L2 -4 3268 3211 266 322 104 65 chr2 219741589 219742052 -30945802 - L2 LINE L2 -586 2728 2248 195 42 0 0 chr2 219742208 219742232 -30945622 + (GGAAA)n Simple_repeat Simple_repeat 3 26 0 3167 195 77 36 chr2 219742232 219743613 -30944241 + L1ME1 LINE L1 4709 6161 -5 331 317 117 40 chr2 219743849 219744174 -30943680 - L2 LINE L2 -1438 1876 1527 21 0 0 0 chr2 219744258 219744279 -30943575 + AT_rich Low_complexity Low_complexity 1 21 0 190 319 189 12 chr2 219744655 219744824 -30943030 + MIR SINE MIR 20 218 -44 257 267 0 114 chr2 219746574 219746679 -30941175 + LTR33 LTR ERVL 30 122 -399 335 267 119 40 chr2 219746780 219746982 -30940872 + LTR33 LTR ERVL 304 521 0 273 309 32 11 chr2 219747494 219747588 -30940266 - L2 LINE L2 -616 2698 2603 29 0 0 0 chr2 219748357 219748386 -30939468 + AT_rich Low_complexity Low_complexity 1 29 0 528 322 35 31 chr2 219748516 219748743 -30939111 - MIR SINE MIR -12 250 23 254 264 99 58 chr2 219748740 219748861 -30938993 + MIR3 SINE MIR 81 206 -2 * 23 0 0 0 chr2 219752482 219752505 -30935349 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 219753032 219753053 -30934801 + AT_rich Low_complexity Low_complexity 1 21 0 2347 65 3 0 chr2 219753053 219753346 -30934508 + AluY SINE Alu 1 294 -17 21 0 0 0 chr2 219753868 219753889 -30933965 + AT_rich Low_complexity Low_complexity 1 21 0 180 318 118 9 chr2 219754737 219754847 -30933007 - L2 LINE L2 -5 3308 3187 2189 128 0 6 chr2 219755250 219755563 -30932291 - AluY SINE Alu 0 311 1 5177 123 61 1 chr2 219755563 219756367 -30931487 + MER57B-int LTR ERV1 6301 7152 -385 662 156 16 8 chr2 219756367 219756489 -30931365 + LTR54B LTR ERV1 5 127 -371 1638 83 116 12 chr2 219756489 219756730 -30931124 + MER57B-int LTR ERV1 7272 7537 0 2601 140 15 0 chr2 219756730 219757130 -30930724 + MER57B LTR ERV1 1 406 -28 259 259 46 8 chr2 219757144 219757275 -30930579 - L1M4 LINE L1 -3736 2410 2275 2346 102 47 8 chr2 219757572 219757933 -30929921 - THE1C LTR MaLR 0 375 1 407 106 18 1 chr2 219758894 219758968 -30928886 - AluS SINE Alu -236 67 1 2288 99 0 0 chr2 219759762 219760066 -30927788 + AluY SINE Alu 1 304 -7 335 226 161 77 chr2 219761111 219761266 -30926588 + MIR SINE MIR 94 261 -1 21 57 0 0 chr2 219762248 219762283 -30925571 + AT_rich Low_complexity Low_complexity 1 35 0 231 36 0 0 chr2 219764847 219764875 -30922979 + (CAAAG)n Simple_repeat Simple_repeat 2 29 0 2124 105 10 3 chr2 219765035 219765339 -30922515 - AluSc SINE Alu -3 306 1 877 233 62 19 chr2 219765755 219765965 -30921889 - MER20 DNA MER1_type 0 219 1 627 227 104 24 chr2 219766022 219766273 -30921581 - MER69 DNA AcHobo -7 2519 2249 1155 253 10 26 chr2 219766399 219766707 -30921147 - MER69 DNA AcHobo -534 692 390 490 304 56 14 chr2 219766704 219766918 -30920936 - MER69 DNA AcHobo -971 255 33 * 2314 62 7 0 chr2 219767231 219767665 -30920189 + L1PA7 LINE L1 5077 5512 -642 5113 46 14 0 chr2 219767773 219768406 -30919448 + L1PA7 LINE L1 5511 6152 -2 265 293 40 0 chr2 219768577 219768652 -30919202 + MIR SINE MIR 95 172 -90 248 250 0 0 chr2 219768854 219768902 -30918952 + 5S rRNA rRNA 1 48 -73 319 200 116 32 chr2 219768908 219769003 -30918851 + MIR SINE MIR 71 173 -89 2117 145 36 12 chr2 219770078 219770493 -30917361 - L1MA9 LINE L1 0 6312 5888 602 153 59 0 chr2 219770495 219770613 -30917241 - L1MA9 LINE L1 -625 5558 5434 1773 103 76 66 chr2 219770962 219771263 -30916591 + AluSg SINE Alu 6 309 -1 2200 103 0 0 chr2 219771431 219771722 -30916132 + AluY SINE Alu 1 291 -20 247 185 84 109 chr2 219772698 219772817 -30915037 + MLT1H LTR MaLR 432 547 -2 582 238 73 133 chr2 219773141 219773390 -30914464 + MER110 LTR ERV1 196 424 -67 2083 123 3 7 chr2 219773390 219773690 -30914164 + AluSg SINE Alu 1 299 -11 582 238 73 133 chr2 219773690 219773755 -30914099 + MER110 LTR ERV1 424 491 0 264 267 53 0 chr2 219773892 219773967 -30913887 + MIR3 SINE MIR 130 208 0 22 35 0 0 chr2 219774052 219774081 -30913773 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr2 219775547 219775583 -30912271 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 219775710 219775731 -30912123 + AT_rich Low_complexity Low_complexity 1 21 0 2018 99 7 3 chr2 219775937 219776247 -30911607 - AluSx SINE Alu 0 311 1 1152 256 62 25 chr2 219776266 219776621 -30911233 + MER87 LTR ERV1 174 541 0 355 328 49 16 chr2 219776627 219776749 -30911105 + MER87-int LTR ERV1 5 130 -1656 * 1798 117 40 3 chr2 219776746 219777045 -30910809 - MER87-int LTR ERV1 -672 1114 805 1199 261 55 28 chr2 219777197 219777561 -30910293 - MER87-int LTR ERV1 -1408 378 5 1222 258 67 14 chr2 219777567 219777924 -30909930 - MER87 LTR ERV1 0 541 166 2452 68 3 0 chr2 219778031 219778325 -30909529 - AluSp SINE Alu -18 295 1 46 45 0 0 chr2 219778539 219778606 -30909248 + AT_rich Low_complexity Low_complexity 1 67 0 349 212 0 0 chr2 219778965 219779031 -30908823 - MER5A DNA MER1_type -118 71 6 438 349 93 33 chr2 219780061 219780797 -30907057 + L1MC4a LINE L1 4457 5233 -913 2085 113 7 3 chr2 219780861 219781153 -30906701 + AluSg SINE Alu 1 293 -17 349 331 168 36 chr2 219781348 219781901 -30905953 + L1MC4a LINE L1 5303 5928 -1880 1031 235 40 67 chr2 219781968 219782296 -30905558 - LTR40b LTR ERVL -8 454 136 180 152 0 0 chr2 219782634 219782667 -30905187 + (TA)n Simple_repeat Simple_repeat 1 33 0 2064 118 0 25 chr2 219783497 219783812 -30904042 + AluSg SINE Alu 4 310 0 1378 196 0 90 chr2 219785517 219785838 -30902016 + AluJo SINE Alu 1 292 -20 225 94 0 0 chr2 219786156 219786188 -30901666 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 372 99 176 77 chr2 219786522 219786613 -30901241 - L1MD3 LINE L1 0 7995 7896 1416 99 0 0 chr2 219786657 219786858 -30900996 + L1PA13 LINE L1 5777 5977 -186 471 132 13 0 chr2 219787132 219787208 -30900646 - L1MB1 LINE L1 -20 6169 6093 351 192 67 19 chr2 219787306 219787410 -30900444 - MLT1K LTR MaLR -10 578 470 5063 178 68 23 chr2 219787439 219787749 -30900105 - L1MC3 LINE L1 -2 7783 7489 2243 126 16 16 chr2 219787749 219788113 -30899741 + THE1B LTR MaLR 1 364 0 11726 88 4 9 chr2 219788113 219789702 -30898152 + THE1B-int LTR MaLR 1 1580 0 2001 149 22 19 chr2 219789702 219790065 -30897789 + THE1B LTR MaLR 1 364 0 5063 178 68 23 chr2 219790065 219790854 -30897000 - L1MC3 LINE L1 -295 7490 6632 2174 110 3 7 chr2 219792474 219792784 -30895070 - AluSc SINE Alu 0 309 1 488 263 140 6 chr2 219792907 219793078 -30894776 - MIR SINE MIR -2 260 67 1015 236 67 0 chr2 219793180 219793388 -30894466 + LTR40c LTR ERVL 4 225 -240 722 302 41 12 chr2 219793573 219793815 -30894039 - MIR SINE MIR 0 262 14 2995 129 59 8 chr2 219793911 219794438 -30893416 + L1PA13 LINE L1 5610 6163 0 307 297 142 79 chr2 219795103 219795483 -30892371 - L1M2 LINE L1 -5924 925 522 380 298 143 77 chr2 219796003 219796470 -30891384 - L1M2 LINE L1 -5924 925 428 1621 182 0 40 chr2 219799627 219799929 -30887925 - AluJo SINE Alu -22 290 1 2301 90 0 23 chr2 219800009 219800319 -30887535 - AluY SINE Alu -5 306 4 432 281 178 0 chr2 219800759 219800905 -30886949 - MER5A DNA MER1_type -9 180 9 332 299 17 0 chr2 219801111 219801228 -30886626 + MER117 DNA MER1_type 1 119 -78 23 0 0 0 chr2 219803116 219803139 -30884715 + AT_rich Low_complexity Low_complexity 1 23 0 375 237 46 72 chr2 219803483 219803635 -30884219 + MIR SINE MIR 65 212 -50 2842 10 0 0 chr2 219804093 219804404 -30883450 + AluYa5 SINE Alu 1 311 0 322 241 23 23 chr2 219804557 219804644 -30883210 - MIR SINE MIR 0 262 176 1653 264 53 30 chr2 219804652 219804683 -30883171 + MLT1F LTR MaLR 4 33 -509 1828 125 72 31 chr2 219804683 219805042 -30882812 + THE1C LTR MaLR 1 374 -1 1653 264 53 30 chr2 219805042 219805484 -30882370 + MLT1F LTR MaLR 33 488 -54 2049 161 42 26 chr2 219805486 219805939 -30881915 - L1MA9 LINE L1 -1 6311 5852 506 257 61 0 chr2 219806595 219806743 -30881111 + MIR SINE MIR 106 262 0 192 77 0 0 chr2 219806948 219806974 -30880880 + (CAA)n Simple_repeat Simple_repeat 2 27 0 25 31 0 0 chr2 219807629 219807661 -30880193 + AT_rich Low_complexity Low_complexity 1 32 0 304 323 121 0 chr2 219808407 219808531 -30879323 + MIR SINE MIR 124 262 0 21 36 0 0 chr2 219809618 219809646 -30878208 + AT_rich Low_complexity Low_complexity 1 28 0 285 242 0 0 chr2 219810218 219810280 -30877574 + L2 LINE L2 3252 3313 0 1846 87 116 25 chr2 219811012 219811287 -30876567 - AluY SINE Alu -11 300 1 297 219 0 0 chr2 219811930 219812003 -30875851 + CT-rich Low_complexity Low_complexity 3 75 0 258 241 17 17 chr2 219812108 219812166 -30875688 + Charlie1 DNA MER1_type 1 58 -2703 1431 220 58 18 chr2 219812177 219812573 -30875281 + Charlie1 DNA MER1_type 2343 2754 -7 516 103 13 0 chr2 219812728 219812806 -30875048 + MADE1 DNA Mariner 1 79 -1 326 300 82 9 chr2 219814168 219814278 -30873576 + L2 LINE L2 3151 3268 -4 347 0 23 0 chr2 219814331 219814374 -30873480 + (TG)n Simple_repeat Simple_repeat 2 45 0 2638 194 61 20 chr2 219815127 219815811 -30872043 - L1 LINE L1 -2323 5242 4531 * 3951 164 50 6 chr2 219815796 219816479 -30871375 - L1 LINE L1 -6840 725 13 314 350 119 0 chr2 219816677 219816820 -30871034 - LTR67 LTR ERVL -279 278 119 22 35 0 0 chr2 219817503 219817532 -30870322 + AT_rich Low_complexity Low_complexity 1 29 0 1031 209 15 68 chr2 219817824 219818128 -30869726 + L1MC4a LINE L1 6605 6835 -973 1456 218 55 17 chr2 219818191 219818261 -30869593 - LTR52 LTR ERVL -3 418 352 360 0 0 0 chr2 219818261 219818301 -30869553 + (CA)n Simple_repeat Simple_repeat 1 40 0 1456 218 55 17 chr2 219818301 219818633 -30869221 - LTR52 LTR ERVL -69 352 1 25000 112 40 11 chr2 219818751 219822637 -30865217 - L1P LINE L1 -2136 4010 11 2316 183 20 0 chr2 219822816 219823270 -30864584 + L1MB1 LINE L1 5699 6161 -7 22 0 0 0 chr2 219823391 219823413 -30864441 + AT_rich Low_complexity Low_complexity 1 22 0 2298 251 73 15 chr2 219823427 219824656 -30863198 - L1ME2 LINE L1 -16 6148 4846 216 0 0 0 chr2 219824754 219824778 -30863076 + (TG)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr2 219824859 219824888 -30862966 + AT_rich Low_complexity Low_complexity 1 29 0 280 290 90 0 chr2 219824947 219825047 -30862807 + L2 LINE L2 3151 3259 -13 256 242 137 62 chr2 219827027 219827188 -30860666 - MIR SINE MIR -10 252 80 366 265 44 29 chr2 219827721 219827857 -30859997 - L1MCc LINE L1 -5505 918 781 2112 91 77 40 chr2 219827945 219828296 -30859558 + THE1B LTR MaLR 1 364 0 9793 79 3 154 chr2 219828296 219830152 -30857702 + THE1B-int LTR MaLR 1 1577 -3 1910 104 107 33 chr2 219830154 219830491 -30857363 + THE1B LTR MaLR 3 364 0 742 165 0 0 chr2 219830633 219830748 -30857106 + L1MA2 LINE L1 786 900 -6665 11685 172 38 7 chr2 219830753 219834498 -30853356 + L1MA2 LINE L1 3806 7719 -4 23 33 0 0 chr2 219834498 219834528 -30853326 + AT_rich Low_complexity Low_complexity 1 30 0 6207 227 30 47 chr2 219835318 219837908 -30849946 + L1P3 LINE L1 10 2583 -3878 3911 83 4 11 chr2 219837908 219838453 -30849401 + L1PA10 LINE L1 5628 6168 0 6207 227 30 47 chr2 219838453 219838481 -30849373 + L1P3 LINE L1 2583 2610 -3851 5766 12 30 0 chr2 219838740 219839406 -30848448 - L1PA3 LINE L1 -4 6151 5466 24 0 0 0 chr2 219839668 219839692 -30848162 + AT_rich Low_complexity Low_complexity 1 24 0 269 122 0 0 chr2 219839692 219839733 -30848121 - LTR54 LTR ERV1 -68 442 402 547 141 8 74 chr2 219839902 219840023 -30847831 - MER46B DNA MER2_type 0 236 124 * 2132 185 37 48 chr2 219840000 219840460 -30847394 - LTR24 LTR ERV1 -12 455 1 1393 134 106 14 chr2 219840460 219840714 -30847140 - MER46B DNA MER2_type -82 154 1 641 215 13 34 chr2 219840714 219840863 -30846991 - MER58A DNA MER1_type -42 182 37 620 296 81 74 chr2 219841070 219841502 -30846352 + L2 LINE L2 2879 3313 0 495 0 0 0 chr2 219841851 219841906 -30845948 + (CA)n Simple_repeat Simple_repeat 2 56 0 31 0 0 0 chr2 219842742 219842773 -30845081 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr2 219843308 219843340 -30844514 + AT_rich Low_complexity Low_complexity 1 32 0 903 226 4 62 chr2 219843528 219843754 -30844100 + MER58A DNA MER1_type 4 216 -8 31 44 0 0 chr2 219844228 219844273 -30843581 + AT_rich Low_complexity Low_complexity 1 45 0 29 60 0 0 chr2 219844794 219844844 -30843010 + AT_rich Low_complexity Low_complexity 1 50 0 491 263 58 73 chr2 219844934 219845139 -30842715 - MIR SINE MIR -60 202 1 3438 286 102 33 chr2 219846769 219848547 -30839307 + L2 LINE L2 1378 3298 -15 1249 120 35 5 chr2 219849281 219849481 -30838373 + L1MC1 LINE L1 6128 6333 0 1091 117 6 0 chr2 219849489 219849652 -30838202 - L1PB4 LINE L1 -570 5586 5423 2760 164 65 0 chr2 219849652 219850156 -30837698 + L1PB4 LINE L1 5617 6155 -1 350 303 50 14 chr2 219850160 219850378 -30837476 - L1ME4a LINE L1 -69 6052 5827 25 31 0 0 chr2 219850643 219850675 -30837179 + AT_rich Low_complexity Low_complexity 1 32 0 249 118 0 132 chr2 219851715 219851791 -30836063 - L1MA4 LINE L1 -5 6295 6230 3270 127 24 38 chr2 219851801 219852383 -30835471 - L1MA4 LINE L1 -26 6274 5701 245 307 179 38 chr2 219852798 219853010 -30834844 + MIR SINE MIR 20 261 -1 602 88 59 10 chr2 219853493 219853621 -30834233 + L1PA3 LINE L1 6049 6155 0 228 35 0 0 chr2 219853843 219853872 -30833982 + (A)n Simple_repeat Simple_repeat 1 29 0 501 313 75 7 chr2 219854194 219854475 -30833379 - L2 LINE L2 -163 3150 2851 1659 168 8 72 chr2 219854544 219854668 -30833186 + L1M3 LINE L1 5374 5504 -664 2246 78 10 3 chr2 219854668 219854964 -30832890 + AluY SINE Alu 2 299 -12 1659 168 8 72 chr2 219854964 219855202 -30832652 + L1M3 LINE L1 5504 5713 -455 4814 45 3 2 chr2 219855302 219855900 -30831954 + L1P LINE L1 3978 4576 -1570 669 325 52 15 chr2 219855906 219856312 -30831542 + L1MEc LINE L1 1496 1916 -4480 456 186 6 3 chr2 219856331 219856433 -30831421 + L1ME1 LINE L1 6030 6133 -29 1783 152 19 61 chr2 219856608 219856971 -30830883 - L1MC1 LINE L1 0 6333 5986 2094 113 30 0 chr2 219858027 219858327 -30829527 + AluSc SINE Alu 1 309 0 189 107 0 0 chr2 219858459 219858487 -30829367 + (TCCA)n Simple_repeat Simple_repeat 4 31 0 266 321 67 12 chr2 219859521 219859686 -30828168 - L1MEd LINE L1 -4972 1147 974 256 108 0 0 chr2 219859721 219859758 -30828096 + L2 LINE L2 3269 3305 -8 206 313 35 83 chr2 219860629 219860773 -30827081 + MIR SINE MIR 126 262 0 37 39 0 0 chr2 219861504 219861555 -30826299 + AT_rich Low_complexity Low_complexity 1 51 0 27 29 0 0 chr2 219862670 219862704 -30825150 + AT_rich Low_complexity Low_complexity 1 34 0 61 45 0 0 chr2 219862820 219862909 -30824945 + AT_rich Low_complexity Low_complexity 1 89 0 22 35 0 0 chr2 219862927 219862956 -30824898 + AT_rich Low_complexity Low_complexity 1 29 0 225 188 16 16 chr2 219863585 219863649 -30824205 - HAL1b LINE L1 -540 808 745 527 278 66 15 chr2 219863870 219864129 -30823725 - HAL1 LINE L1 -738 1769 1498 3204 79 49 13 chr2 219864737 219864777 -30823077 - MLT2A1 LTR ERVL 0 515 478 210 71 0 0 chr2 219864777 219864805 -30823049 + (TA)n Simple_repeat Simple_repeat 2 29 0 3204 79 49 13 chr2 219864805 219865235 -30822619 - MLT2A1 LTR ERVL -37 478 1 18663 76 6 2 chr2 219865235 219867890 -30819964 - HERVL-A1 LTR ERVL 0 5654 2939 621 361 77 7 chr2 219867888 219868187 -30819667 - HERVL-A1 LTR ERVL -3559 2205 1886 * 5265 124 38 5 chr2 219868597 219869460 -30818394 - L1MA3 LINE L1 0 6305 5414 5031 177 31 8 chr2 219869585 219870606 -30817248 - L1MA3 LINE L1 -1097 5049 4005 237 353 25 34 chr2 219871884 219872003 -30815851 - L2 LINE L2 -251 3021 2904 465 205 0 0 chr2 219872323 219872401 -30815453 + MER3 DNA MER1_type 1 78 -131 1391 199 3 34 chr2 219872949 219873271 -30814583 - AluJo SINE Alu 0 312 1 302 191 83 12 chr2 219873696 219873780 -30814074 + L1MC4 LINE L1 6614 6703 -1339 238 50 50 0 chr2 219873781 219873821 -30814033 + (TA)n Simple_repeat Simple_repeat 1 42 0 1002 293 69 47 chr2 219874195 219875270 -30812584 + L1MEc LINE L1 107 1167 -5051 509 328 25 15 chr2 219875384 219875582 -30812272 - HERV16 LTR ERVL -2841 2155 1956 30288 38 3 1 chr2 219875810 219880338 -30807516 - L1PA4 LINE L1 0 6155 1622 1570 223 110 4 chr2 219880350 219880861 -30806993 + L1MEc LINE L1 2759 3323 -2892 261 316 0 11 chr2 219880848 219880943 -30806911 + L1ME2 LINE L1 5460 5553 -611 * 1149 236 6 33 chr2 219880944 219881275 -30806579 + L1ME2 LINE L1 5617 5938 -226 418 234 65 8 chr2 219881276 219881400 -30806454 + L1ME2 LINE L1 6025 6155 -9 1775 122 3 74 chr2 219882273 219882584 -30805270 + AluSx SINE Alu 1 289 -23 325 335 26 47 chr2 219882649 219882840 -30805014 + MIR SINE MIR 20 206 -56 1482 122 76 127 chr2 219883296 219883691 -30804163 + THE1C LTR MaLR 1 375 0 283 318 28 0 chr2 219885197 219885304 -30802550 - MER94 DNA DNA -1 133 24 10365 69 17 3 chr2 219885330 219887479 -30800375 - L1PA6 LINE L1 -9 6145 3973 293 217 0 14 chr2 219887678 219887747 -30800107 + MLT1F1 LTR MaLR 33 100 -467 1192 235 38 22 chr2 219887747 219888062 -30799792 + L1MC3 LINE L1 7157 7476 -309 920 90 0 0 chr2 219888062 219888184 -30799670 - MSTB1 LTR MaLR 0 432 311 776 110 0 0 chr2 219888185 219888294 -30799560 - MSTB LTR MaLR -317 109 1 1354 196 26 3 chr2 219888294 219888600 -30799254 + L1MC3 LINE L1 7472 7784 -1 25 65 0 0 chr2 219888685 219888731 -30799123 + AT_rich Low_complexity Low_complexity 1 46 0 30 100 0 0 chr2 219889206 219889306 -30798548 + AT_rich Low_complexity Low_complexity 1 100 0 21 0 0 0 chr2 219889577 219889598 -30798256 + AT_rich Low_complexity Low_complexity 1 21 0 294 312 79 61 chr2 219889660 219890054 -30797800 + L1MEc LINE L1 456 856 -5969 779 287 65 45 chr2 219890418 219890779 -30797075 + L1MEc LINE L1 1014 1366 -5176 2060 120 3 0 chr2 219890779 219891070 -30796784 - AluSx SINE Alu -16 296 5 779 287 65 45 chr2 219891070 219891177 -30796677 + L1MEc LINE L1 1366 1469 -5073 2607 30 7 0 chr2 219891177 219891481 -30796373 + AluYa5 SINE Alu 1 306 -5 779 287 65 45 chr2 219891481 219891696 -30796158 + L1MEc LINE L1 1469 1710 -4832 2243 81 6 25 chr2 219891721 219892042 -30795812 - THE1B LTR MaLR -49 315 1 397 133 0 0 chr2 219892042 219892102 -30795752 + L1M3 LINE L1 5741 5800 -383 7225 48 4 4 chr2 219892103 219893086 -30794768 - L1PA5 LINE L1 -2 6152 5169 774 325 77 29 chr2 219893239 219893691 -30794163 - ERVL LTR ERVL -2092 3562 3089 635 334 73 2 chr2 219893791 219894153 -30793701 - ERVL LTR ERVL -2141 2855 2499 2850 301 78 24 chr2 219894870 219896898 -30790956 - ERVL LTR ERVL -2227 2769 559 225 0 0 0 chr2 219896902 219896927 -30790927 + (CA)n Simple_repeat Simple_repeat 1 25 0 23 68 0 0 chr2 219897052 219897096 -30790758 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr2 219898321 219898349 -30789505 + AT_rich Low_complexity Low_complexity 1 28 0 2688 12 0 37 chr2 219898541 219898863 -30788991 - AluYa5 SINE Alu -1 310 1 3681 172 41 31 chr2 219899019 219899768 -30788086 + L1MB3 LINE L1 15 771 -5613 * 4044 204 72 7 chr2 219899751 219901482 -30786372 + L1MB3 LINE L1 4528 6372 -47 23 68 0 0 chr2 219901891 219901935 -30785919 + AT_rich Low_complexity Low_complexity 1 44 0 2313 100 0 0 chr2 219902096 219902395 -30785459 + AluSg SINE Alu 1 299 -11 461 305 76 25 chr2 219902533 219902730 -30785124 + MIR SINE MIR 18 224 -38 2196 91 3 14 chr2 219903673 219903969 -30783885 + AluSg SINE Alu 1 293 -17 45 75 0 0 chr2 219904432 219904526 -30783328 + AT_rich Low_complexity Low_complexity 1 94 0 392 282 145 49 chr2 219904618 219905046 -30782808 - L1ME LINE L1 -390 6040 5562 407 168 19 9 chr2 219905337 219905444 -30782410 - L1MC4 LINE L1 -218 7824 7717 1794 209 18 14 chr2 219905472 219905907 -30781947 - L1MD1 LINE L1 -5 6237 5801 2596 224 44 18 chr2 219905907 219906682 -30781172 - L1ME LINE L1 -2570 3836 3042 1055 243 49 4 chr2 219906681 219906924 -30780930 - L1ME LINE L1 -6145 264 11 * 856 300 27 27 chr2 219907095 219907581 -30780273 - L1MEc LINE L1 -1289 4926 4441 2533 289 59 34 chr2 219907905 219908183 -30779671 + L2 LINE L2 110 379 -2934 717 226 14 33 chr2 219908183 219908395 -30779459 + MER63A DNA MER1_type 1 208 -2 2533 289 59 34 chr2 219908395 219910023 -30777831 + L2 LINE L2 379 3313 0 916 294 62 68 chr2 219910040 219911661 -30776193 - L1MEc LINE L1 -1793 4422 2813 280 320 120 0 chr2 219911662 219911812 -30776042 + MLT1J LTR MaLR 1 168 -343 1917 162 0 13 chr2 219911902 219912217 -30775637 - AluJb SINE Alu -1 311 1 435 298 76 36 chr2 219912661 219912936 -30774918 - L1MEc LINE L1 -3953 2443 2158 22 56 0 0 chr2 219913109 219913145 -30774709 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr2 219913266 219913289 -30774565 + AT_rich Low_complexity Low_complexity 1 23 0 328 292 25 40 chr2 219913299 219913501 -30774353 - L1MEc LINE L1 -4879 1326 1128 7632 23 4 0 chr2 219913537 219914526 -30773328 - L1PA4 LINE L1 -3 6152 5164 10914 29 1 0 chr2 219914526 219915832 -30772022 + L1PA4 LINE L1 3850 5156 -990 23 0 0 0 chr2 219915945 219915968 -30771886 + AT_rich Low_complexity Low_complexity 1 23 0 229 196 0 20 chr2 219916269 219916320 -30771534 - L1MEc LINE L1 -6058 147 98 22 35 0 0 chr2 219916419 219916448 -30771406 + AT_rich Low_complexity Low_complexity 1 29 0 2925 137 2 0 chr2 219916456 219916929 -30770925 - L1MA4 LINE L1 -14 6286 5813 555 110 44 82 chr2 219917756 219917890 -30769964 + LTR10A LTR ERV1 434 609 0 422 240 155 93 chr2 219917890 219918566 -30769288 + LTR10A-int LTR ERV1 5 722 -5927 881 79 28 11 chr2 219918690 219918867 -30768987 + (GA)n Simple_repeat Simple_repeat 1 180 0 5334 90 30 17 chr2 219918868 219919790 -30768064 + LTR10A-int LTR ERV1 740 1720 -5176 303 250 175 0 chr2 219919792 219919872 -30767982 - LTR8 LTR ERV1 -438 253 160 17226 102 14 19 chr2 219919877 219922789 -30765065 + Harlequin LTR ERV1 1806 6645 -4 1527 222 83 39 chr2 219922792 219923274 -30764580 + LTR10A LTR ERV1 1 503 -106 23 0 0 0 chr2 219923282 219923305 -30764549 + AT_rich Low_complexity Low_complexity 1 23 0 30 45 0 0 chr2 219923750 219923794 -30764060 + AT_rich Low_complexity Low_complexity 1 44 0 31 44 0 0 chr2 219924402 219924447 -30763407 + AT_rich Low_complexity Low_complexity 1 45 0 21 36 0 0 chr2 219925276 219925304 -30762550 + AT_rich Low_complexity Low_complexity 1 28 0 1219 146 14 14 chr2 219925758 219925978 -30761876 - THE1A LTR MaLR -135 220 1 360 344 91 35 chr2 219926268 219926663 -30761191 - L2 LINE L2 -638 2676 2260 244 309 18 18 chr2 219926689 219926799 -30761055 - L2 LINE L2 -2917 397 288 1427 251 58 20 chr2 219927610 219928009 -30759845 - MER74B LTR ERVL -74 548 135 21 0 0 0 chr2 219928596 219928617 -30759237 + AT_rich Low_complexity Low_complexity 1 21 0 2054 119 14 7 chr2 219928717 219929012 -30758842 - AluSq SINE Alu -16 297 1 183 238 10 20 chr2 219929018 219929119 -30758735 + (TA)n Simple_repeat Simple_repeat 2 101 0 21 36 0 0 chr2 219931613 219931641 -30756213 + AT_rich Low_complexity Low_complexity 1 28 0 7160 172 93 69 chr2 219931757 219933388 -30754466 + MER52A LTR ERV1 1 1670 -85 37872 83 13 0 chr2 219933488 219938422 -30749432 - HERVL-A2 LTR ERVL -656 4998 1 354 43 43 0 chr2 219938422 219938469 -30749385 - MLT2A2 LTR ERVL 0 453 405 * 1269 103 0 0 chr2 219938462 219938637 -30749217 - MLT2A1 LTR ERVL -269 175 1 2745 116 10 0 chr2 219938637 219939035 -30748819 - MER52A-int LTR ERV1 -4689 2402 2001 934 204 52 17 chr2 219939035 219939420 -30748434 - MER52A-int LTR ERV1 -5421 1670 1006 4600 208 25 6 chr2 219939445 219940315 -30747539 - MER52A-int LTR ERV1 -6204 887 1 769 197 67 129 chr2 219940449 219940958 -30746896 - MER52A LTR ERV1 -138 893 263 4105 111 5 5 chr2 219940968 219941538 -30746316 + THE1C-int LTR MaLR 1011 1580 0 1779 147 40 40 chr2 219941538 219941913 -30745941 + THE1C LTR MaLR 1 375 0 24 0 0 0 chr2 219942662 219942686 -30745168 + AT_rich Low_complexity Low_complexity 1 24 0 902 281 20 103 chr2 219942728 219943223 -30744631 + L2 LINE L2 2854 3307 -6 561 278 67 72 chr2 219943230 219943604 -30744250 + Charlie8 DNA MER1_type 116 487 -1930 23 33 0 0 chr2 219944576 219944606 -30743248 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 219944842 219944863 -30742991 + AT_rich Low_complexity Low_complexity 1 21 0 497 230 158 45 chr2 219945755 219946020 -30741834 - MLT1I LTR MaLR -41 368 74 40 59 0 0 chr2 219946205 219946273 -30741581 + AT_rich Low_complexity Low_complexity 1 68 0 794 251 63 49 chr2 219946750 219947100 -30740754 - L1ME4a LINE L1 -252 5869 5515 817 250 22 16 chr2 219947211 219947395 -30740459 - MER5A DNA MER1_type -4 185 1 44 46 0 0 chr2 219948292 219948357 -30739497 + AT_rich Low_complexity Low_complexity 1 65 0 2032 145 3 3 chr2 219948660 219948963 -30738891 - AluJb SINE Alu -7 305 3 271 367 67 0 chr2 219949247 219949367 -30738487 + L2 LINE L2 3138 3265 -7 22 0 0 0 chr2 219949625 219949647 -30738207 + AT_rich Low_complexity Low_complexity 1 22 0 1795 196 47 3 chr2 219949647 219950034 -30737820 - L1MA4 LINE L1 -33 6267 5864 1549 118 9 0 chr2 219950022 219950251 -30737603 + L1MA4 LINE L1 5665 5895 -405 * 22 80 0 0 chr2 219950428 219950478 -30737376 + AT_rich Low_complexity Low_complexity 1 50 0 273 302 59 69 chr2 219950566 219950768 -30737086 - MIR SINE MIR -3 259 60 428 290 53 41 chr2 219950787 219950956 -30736898 - MER5B DNA MER1_type -7 171 1 21 71 0 0 chr2 219951623 219951665 -30736189 + AT_rich Low_complexity Low_complexity 1 42 0 378 312 5 58 chr2 219951675 219951880 -30735974 + L2 LINE L2 3115 3308 -5 297 337 41 20 chr2 219951949 219952145 -30735709 + L1ME4a LINE L1 5502 5701 -420 246 269 85 7 chr2 219952314 219952455 -30735399 + L1ME4a LINE L1 5965 6116 -5 2059 106 13 3 chr2 219952468 219952769 -30735085 + AluSx SINE Alu 2 305 -7 24 32 0 0 chr2 219953455 219953486 -30734368 + AT_rich Low_complexity Low_complexity 1 31 0 2418 81 10 0 chr2 219955943 219956251 -30731603 + AluY SINE Alu 1 311 0 198 0 0 0 chr2 219957324 219957346 -30730508 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1409 138 0 0 chr2 219957348 219957551 -30730303 - AluSg/x SINE Alu -24 288 86 1017 324 155 27 chr2 219957640 219958842 -30729012 + L2 LINE L2 1781 3135 -178 356 272 121 17 chr2 219958871 219959044 -30728810 + MLT1J2 LTR MaLR 1 191 -259 21 0 0 0 chr2 219959204 219959225 -30728629 + AT_rich Low_complexity Low_complexity 1 21 0 1818 294 69 24 chr2 219959239 219960195 -30727659 - L2 LINE L2 0 3313 2307 22 0 0 0 chr2 219960384 219960406 -30727448 + AT_rich Low_complexity Low_complexity 1 22 0 245 234 13 13 chr2 219960452 219960529 -30727325 + (TA)n Simple_repeat Simple_repeat 1 77 0 23 33 0 0 chr2 219960845 219960875 -30726979 + AT_rich Low_complexity Low_complexity 1 30 0 476 347 99 24 chr2 219962382 219962794 -30725060 + L2 LINE L2 2301 2743 -571 245 312 184 21 chr2 219963100 219963241 -30724613 + L2 LINE L2 3109 3272 0 487 239 37 9 chr2 219964774 219964883 -30722971 - 5S rRNA rRNA -9 112 1 1450 189 32 21 chr2 219965895 219966180 -30721674 - AluJb SINE Alu -21 291 4 32 0 0 0 chr2 219966212 219966244 -30721610 + AT_rich Low_complexity Low_complexity 1 32 0 297 258 89 8 chr2 219966396 219966520 -30721334 - MIR SINE MIR -1 261 128 213 305 99 38 chr2 219966550 219966681 -30721173 + L2 LINE L2 3134 3272 0 630 228 6 19 chr2 219966832 219966990 -30720864 - MER106A DNA MER1_type -80 156 1 23 0 0 0 chr2 219967536 219967559 -30720295 + AT_rich Low_complexity Low_complexity 1 23 0 1191 277 54 26 chr2 219967566 219968064 -30719790 - LTR38 LTR ERV1 0 556 45 22 35 0 0 chr2 219968237 219968266 -30719588 + AT_rich Low_complexity Low_complexity 1 29 0 30 59 0 0 chr2 219969667 219969718 -30718136 + AT_rich Low_complexity Low_complexity 1 51 0 363 351 70 19 chr2 219970440 219970699 -30717155 - MLT1K LTR MaLR -2 586 315 4687 34 3 19 chr2 219971800 219972051 -30715803 + L1PA4 LINE L1 5579 5832 -323 2689 23 0 0 chr2 219972051 219972355 -30715499 + AluYb8 SINE Alu 1 304 -14 4687 34 3 19 chr2 219972355 219972689 -30715165 + L1PA4 LINE L1 5832 6155 0 1888 113 0 4 chr2 219972745 219973030 -30714824 - AluSg SINE Alu 0 310 27 260 301 14 0 chr2 219973221 219973294 -30714560 + (TCCA)n Simple_repeat Simple_repeat 4 77 0 234 100 0 0 chr2 219973323 219973353 -30714501 - L1P LINE L1 -5799 347 318 3907 30 2 0 chr2 219973353 219973849 -30714005 + L1P LINE L1 2914 3410 -2736 27 29 0 0 chr2 219974139 219974173 -30713681 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 219974787 219974815 -30713039 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 219975756 219975778 -30712076 + AT_rich Low_complexity Low_complexity 1 22 0 2053 4 0 0 chr2 219978231 219978464 -30709390 - L1PA2 LINE L1 -4 6151 5919 369 273 91 0 chr2 219980306 219980416 -30707438 - L2 LINE L2 -2 3311 3192 5529 183 36 14 chr2 219980711 219982042 -30705812 + L1PA16 LINE L1 4125 5543 -623 1246 198 55 11 chr2 219982042 219982315 -30705539 - AluJo SINE Alu -27 285 1 5529 183 36 14 chr2 219982315 219982939 -30704915 + L1PA16 LINE L1 5543 6152 -14 2294 124 14 19 chr2 219983053 219983417 -30704437 + THE1B LTR MaLR 1 362 -2 798 233 57 0 chr2 219983568 219983761 -30704093 + MLT1C LTR MaLR 1 204 -263 1151 230 17 62 chr2 219983819 219984064 -30703790 + MLT1C LTR MaLR 181 389 -78 2290 68 0 27 chr2 219984064 219984359 -30703495 + AluY SINE Alu 1 287 -24 1151 230 17 62 chr2 219984359 219984434 -30703420 + MLT1C LTR MaLR 389 466 -1 446 293 215 32 chr2 219986164 219986475 -30701379 - LTR16A LTR ERVL -82 368 1 196 137 39 0 chr2 219986558 219986609 -30701245 + (TA)n Simple_repeat Simple_repeat 2 54 0 21 71 0 0 chr2 219986644 219986686 -30701168 + AT_rich Low_complexity Low_complexity 1 42 0 2556 111 3 11 chr2 219986806 219987184 -30700670 + THE1C LTR MaLR 1 375 0 9437 112 65 36 chr2 219987184 219988719 -30699135 + THE1C-int LTR MaLR 1 1580 0 2380 119 0 53 chr2 219988719 219989039 -30698815 + THE1C LTR MaLR 1 298 -77 2358 101 0 0 chr2 219989039 219989346 -30698508 - AluSg SINE Alu -3 307 1 2380 119 0 53 chr2 219989346 219989421 -30698433 + THE1C LTR MaLR 298 375 0 1437 256 106 74 chr2 219989646 219990593 -30697261 - HAL1 LINE L1 0 2507 1531 614 270 209 46 chr2 219990661 219991231 -30696623 - HAL1 LINE L1 -1796 711 49 22 35 0 0 chr2 219992179 219992208 -30695646 + AT_rich Low_complexity Low_complexity 1 29 0 1270 119 95 0 chr2 219992448 219992658 -30695196 + MER30 DNA MER1_type 1 230 0 644 264 25 0 chr2 219993077 219993236 -30694618 + MER63A DNA MER1_type 48 210 0 1795 163 49 3 chr2 219993252 219993577 -30694277 - Tigger3b DNA MER2_type -6 1225 886 3411 132 33 38 chr2 219993577 219994212 -30693642 - Tigger3b DNA MER2_type -599 632 1 313 234 88 73 chr2 219994233 219994438 -30693416 - HAL1 LINE L1 -5 2502 2295 323 318 162 15 chr2 219994438 219994636 -30693218 - HAL1 LINE L1 -1171 1336 1110 354 23 0 0 chr2 219995114 219995157 -30692697 + (TG)n Simple_repeat Simple_repeat 2 44 0 2038 128 7 3 chr2 219996222 219996520 -30691334 - AluSx SINE Alu -13 299 1 289 316 12 18 chr2 219997429 219997600 -30690254 - L1ME4a LINE L1 0 6121 5952 1517 260 22 13 chr2 219998058 219998515 -30689339 + L1ME2 LINE L1 5555 6015 -149 1513 194 94 6 chr2 219998546 219998875 -30688979 + MLT1B LTR MaLR 1 358 -32 1005 231 21 21 chr2 219998879 219999216 -30688638 + L1MEc LINE L1 736 1072 -5324 236 208 52 13 chr2 219999984 220000061 -30687793 - MER116 DNA Mariner 0 80 1 3223 29 0 0 chr2 220000102 220000561 -30687293 - L1PA3 LINE L1 -514 5641 5183 4412 29 2 0 chr2 220000562 220001083 -30686771 + L1PA3 LINE L1 5631 6152 -3 24 0 0 0 chr2 220001227 220001251 -30686603 + AT_rich Low_complexity Low_complexity 1 24 0 215 229 0 0 chr2 220001708 220001756 -30686098 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 295 60 40 0 chr2 220002576 220002626 -30685228 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 2439 50 0 50 chr2 220003790 220004110 -30683744 - AluY SINE Alu -7 304 1 216 158 0 0 chr2 220004700 220004738 -30683116 + (TG)n Simple_repeat Simple_repeat 1 38 0 2068 128 0 3 chr2 220005097 220005394 -30682460 + AluSx SINE Alu 1 296 -16 957 279 47 3 chr2 220006598 220006960 -30680894 + L1M4 LINE L1 3087 3464 -2682 360 327 78 0 chr2 220006987 220007204 -30680650 - L1M4 LINE L1 -776 5370 5137 356 293 77 40 chr2 220007387 220007790 -30680064 - L1M4 LINE L1 -1318 4828 4411 * 636 275 35 47 chr2 220007777 220008119 -30679735 - HAL1 LINE L1 -1217 1290 953 * 5863 158 58 5 chr2 220008113 220009364 -30678490 - L1MC1 LINE L1 -5 6328 5011 243 329 7 21 chr2 220009394 220009537 -30678317 - HAL1 LINE L1 -1555 952 812 266 198 129 20 chr2 220010324 220010425 -30677429 - L2 LINE L2 -107 3206 3095 686 257 99 72 chr2 220011688 220011981 -30675873 - L1MC/D LINE L1 -2006 5802 5490 2161 97 0 0 chr2 220011981 220012271 -30675583 - AluSc SINE Alu -19 290 1 686 257 99 72 chr2 220012271 220012452 -30675402 - L1MC/D LINE L1 -2318 5490 5315 24 0 0 0 chr2 220012663 220012687 -30675167 + AT_rich Low_complexity Low_complexity 1 24 0 28 29 0 0 chr2 220013702 220013737 -30674117 + AT_rich Low_complexity Low_complexity 1 35 0 318 316 66 49 chr2 220014171 220014475 -30673379 - L1MC/D LINE L1 -1481 4665 4357 21 104 0 0 chr2 220014663 220014740 -30673114 + AT_rich Low_complexity Low_complexity 1 77 0 2062 162 46 36 chr2 220016389 220016940 -30670914 + MLT2A2 LTR ERVL 1 554 0 3507 252 59 39 chr2 220017826 220018998 -30668856 + L1M2a LINE L1 1587 2552 -4615 1686 172 40 35 chr2 220018998 220019371 -30668483 + THE1C LTR MaLR 1 375 0 3507 252 59 39 chr2 220019371 220020661 -30667193 + L1M2a LINE L1 2552 3814 -3353 23 68 0 0 chr2 220021183 220021227 -30666627 + AT_rich Low_complexity Low_complexity 1 44 0 666 200 0 0 chr2 220021397 220021512 -30666342 - FLAM_A SINE Alu -18 115 1 276 110 68 30 chr2 220022296 220022362 -30665492 + L1MC1 LINE L1 6268 6333 0 703 256 59 44 chr2 220022509 220022830 -30665024 - L1MC5 LINE L1 -36 7925 7600 23 33 0 0 chr2 220022861 220022891 -30664963 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr2 220024228 220024255 -30663599 + AT_rich Low_complexity Low_complexity 1 27 0 1958 142 0 0 chr2 220024642 220024924 -30662930 - AluSx SINE Alu -30 282 1 1000 126 49 0 chr2 220025148 220025331 -30662523 + L1MA3 LINE L1 6111 6302 -3 21 36 0 0 chr2 220025514 220025542 -30662312 + AT_rich Low_complexity Low_complexity 1 28 0 389 301 57 34 chr2 220025737 220025946 -30661908 - HAL1 LINE L1 -781 1726 1513 1076 157 5 44 chr2 220026202 220026406 -30661448 - MLT1A1 LTR MaLR -2 363 168 309 241 24 12 chr2 220026402 220026485 -30661369 - MLT1A1 LTR MaLR -114 251 168 * 297 253 24 12 chr2 220026481 220026564 -30661290 - MLT1A1 LTR MaLR -114 251 168 * 1264 165 24 35 chr2 220026560 220026814 -30661040 - MLT1A1 LTR MaLR -114 251 1 448 319 75 45 chr2 220026816 220027117 -30660737 - HAL1 LINE L1 -1289 1218 901 1476 209 59 16 chr2 220027117 220027491 -30660363 - MLT1B LTR MaLR 0 390 1 448 319 75 45 chr2 220027491 220027587 -30660267 - HAL1 LINE L1 -1606 901 809 1924 119 0 0 chr2 220028012 220028273 -30659581 + AluSx SINE Alu 40 300 -12 833 286 12 40 chr2 220028445 220028693 -30659161 - MIR SINE MIR -8 254 14 24 0 0 0 chr2 220028773 220028797 -30659057 + AT_rich Low_complexity Low_complexity 1 24 0 317 308 41 27 chr2 220028963 220029109 -30658745 - L2 LINE L2 -1 3312 3165 358 347 77 20 chr2 220029787 220030035 -30657819 - L2 LINE L2 -2406 908 647 186 43 0 0 chr2 220030923 220030946 -30656908 + (T)n Simple_repeat Simple_repeat 1 23 0 42696 30 21 1 chr2 220030992 220037023 -30650831 - L1HS LINE L1 0 6155 2 408 272 139 38 chr2 220037657 220037815 -30650039 - MER5A DNA MER1_type -9 180 7 346 0 0 98 chr2 220038402 220038484 -30649370 + (TA)n Simple_repeat Simple_repeat 2 75 0 2412 127 3 0 chr2 220039766 220040151 -30647703 - L1P LINE L1 -1075 5071 4686 * 4001 82 2 30 chr2 220040149 220040723 -30647131 + L1PA13 LINE L1 5558 6115 -48 375 167 0 0 chr2 220040717 220040783 -30647071 - L1PA13 LINE L1 -49 6114 6049 * 231 83 0 0 chr2 220040802 220040838 -30647016 + L1PA12 LINE L1 6131 6166 -2 232 143 0 0 chr2 220042400 220042435 -30645419 + U2 snRNA snRNA 1 35 -153 251 189 56 67 chr2 220043721 220043811 -30644043 + LTR48B LTR ERV1 1 89 -555 * 1261 194 81 58 chr2 220043786 220044229 -30643625 + MER39 LTR ERV1 249 581 -4 292 326 62 16 chr2 220044297 220044490 -30643364 - L1ME LINE L1 -536 5585 5384 1438 221 17 7 chr2 220044986 220045275 -30642579 - AluJo SINE Alu -20 292 1 28 29 0 0 chr2 220045841 220045876 -30641978 + AT_rich Low_complexity Low_complexity 1 35 0 365 179 0 11 chr2 220048348 220048443 -30639411 + GA-rich Low_complexity Low_complexity 3 96 0 2093 138 0 0 chr2 220048667 220048965 -30638889 + AluSq SINE Alu 1 298 -15 4125 191 16 30 chr2 220049095 220049949 -30637905 + MER52A LTR ERV1 914 1755 0 568 265 22 28 chr2 220050717 220050898 -30636956 + MIR SINE MIR 1 180 -82 278 381 44 17 chr2 220050982 220051163 -30636691 - MIR SINE MIR -56 206 21 2267 90 10 0 chr2 220052359 220052648 -30635206 + AluY SINE Alu 1 292 -19 2194 122 0 7 chr2 220052685 220052988 -30634866 + AluSx SINE Alu 1 301 -11 583 176 0 0 chr2 220053170 220053278 -30634576 + L1MC3 LINE L1 6737 6844 -941 266 281 95 27 chr2 220053288 220053811 -30634043 - L1MC/D LINE L1 -762 5384 4931 249 33 0 0 chr2 220054072 220054102 -30633752 + (TG)n Simple_repeat Simple_repeat 2 31 0 438 20 0 0 chr2 220054144 220054195 -30633659 + (CA)n Simple_repeat Simple_repeat 2 52 0 1790 310 15 38 chr2 220055334 220056072 -30631782 + L1PB4 LINE L1 12 732 -6117 2126 121 0 7 chr2 220056121 220056418 -30631436 + AluSg SINE Alu 1 295 -15 10693 234 33 27 chr2 220056452 220057671 -30630183 + L1PB4 LINE L1 1145 2355 -4494 1512 117 36 0 chr2 220057671 220057893 -30629961 - MER30 DNA MER1_type 0 230 1 10693 234 33 27 chr2 220057893 220061189 -30626665 + L1PB4 LINE L1 2355 5474 -1375 2124 123 10 7 chr2 220061221 220061531 -30626323 - AluSq SINE Alu -2 311 1 3005 156 39 28 chr2 220061531 220062494 -30625360 + L1PB4 LINE L1 5595 6555 -304 1585 190 7 3 chr2 220062556 220062856 -30624998 + L1PB4 LINE L1 6557 6857 -2 22 35 0 0 chr2 220062985 220063014 -30624840 + AT_rich Low_complexity Low_complexity 1 29 0 207 246 87 29 chr2 220063165 220063234 -30624620 + MIR SINE MIR 38 110 -152 279 308 77 34 chr2 220063393 220063510 -30624344 + MIR SINE MIR 16 137 -71 2188 88 42 0 chr2 220064225 220064510 -30623344 - AluY SINE Alu -14 297 1 334 352 112 17 chr2 220064535 220064768 -30623086 + MIR SINE MIR 8 262 0 300 337 44 33 chr2 220064821 220065002 -30622852 + L2 LINE L2 623 805 -2509 551 255 36 142 chr2 220065200 220065678 -30622176 - MLT1K LTR MaLR -15 573 147 688 259 78 0 chr2 220065729 220065895 -30621959 + MER58A DNA MER1_type 37 215 -9 1861 240 78 71 chr2 220065903 220066548 -30621306 + MLT1E1 LTR MaLR 6 654 0 1339 276 22 4 chr2 220066555 220067026 -30620828 + MLT1E1-int LTR MaLR 8 606 -765 616 293 124 44 chr2 220067065 220067579 -30620275 + L1ME3A LINE L1 4242 4714 -1432 2198 87 0 21 chr2 220067579 220067897 -30619957 + AluY SINE Alu 1 312 0 616 293 124 44 chr2 220067897 220068311 -30619543 + L1ME3A LINE L1 4714 5245 -901 1085 282 70 60 chr2 220068328 220068967 -30618887 + L1ME3A LINE L1 5523 6168 -2 3499 234 43 19 chr2 220068988 220069177 -30618677 + L1M4 LINE L1 4185 4368 -1778 2033 115 17 17 chr2 220069177 220069473 -30618381 + AluSx SINE Alu 1 296 -16 3499 234 43 19 chr2 220069473 220070352 -30617502 + L1M4 LINE L1 4368 5279 -867 2972 181 41 21 chr2 220070354 220071017 -30616837 - L1MA9 LINE L1 -34 6278 5603 1402 272 70 44 chr2 220071079 220071561 -30616293 - L1M3de LINE L1 -5586 1067 573 490 352 37 15 chr2 220071528 220071801 -30616053 - L1M3d LINE L1 -5607 284 6 * 735 168 77 0 chr2 220071857 220072012 -30615842 - L1PA16 LINE L1 -1541 4605 4439 * 2095 193 64 24 chr2 220072001 220072691 -30615163 + L1PA16 LINE L1 4588 5379 -921 2098 102 7 20 chr2 220072691 220072986 -30614868 + AluSq SINE Alu 1 291 -22 2095 193 64 24 chr2 220072986 220073217 -30614637 + L1PA16 LINE L1 5379 5599 -701 * 2626 236 22 15 chr2 220073193 220073876 -30613978 + L1PA13 LINE L1 1410 2097 -4690 16404 65 6 1 chr2 220073876 220075923 -30611931 + HERVK11 LTR ERVK 5896 7953 0 4551 70 10 16 chr2 220075923 220076961 -30610893 + MER11A LTR ERVK 1 1266 0 732 223 6 0 chr2 220076964 220077121 -30610733 + L1PA16 LINE L1 6659 6816 -1 25 51 0 0 chr2 220077121 220077160 -30610694 + AT_rich Low_complexity Low_complexity 1 39 0 2152 124 3 0 chr2 220077334 220077640 -30610214 + AluSx SINE Alu 1 307 -5 330 109 78 0 chr2 220078472 220078536 -30609318 + MER20B DNA MER1_type 666 734 -49 519 291 54 20 chr2 220078605 220078808 -30609046 + L2 LINE L2 2166 2375 -939 3978 127 46 83 chr2 220078817 220079619 -30608235 - LTR19C LTR ERV1 -7 772 1 460 337 169 29 chr2 220079633 220080111 -30607743 + L2 LINE L2 2403 2947 -367 236 329 0 37 chr2 220080305 220080387 -30607467 + L2 LINE L2 2995 3073 -199 206 200 67 0 chr2 220080634 220080679 -30607175 - MIR SINE MIR -183 79 32 24 53 0 0 chr2 220080809 220080847 -30607007 + AT_rich Low_complexity Low_complexity 1 38 0 240 200 27 27 chr2 220081258 220081333 -30606521 + CT-rich Low_complexity Low_complexity 1 75 0 29 78 0 0 chr2 220081502 220081566 -30606288 + AT_rich Low_complexity Low_complexity 1 64 0 27 0 0 0 chr2 220081635 220081662 -30606192 + AT_rich Low_complexity Low_complexity 1 27 0 883 149 58 17 chr2 220082567 220082841 -30605013 + LTR38B LTR ERV1 1 337 -273 1814 175 76 0 chr2 220082841 220083156 -30604698 - MER1B DNA MER1_type 0 339 1 925 260 28 16 chr2 220083156 220083410 -30604444 + LTR38 LTR ERV1 289 545 -11 227 323 0 0 chr2 220083884 220083980 -30603874 + T-rich Low_complexity Low_complexity 5 100 0 383 270 68 22 chr2 220084869 220085147 -30602707 - L1MEd LINE L1 -3733 2396 2106 202 289 0 33 chr2 220085162 220085252 -30602602 + CT-rich Low_complexity Low_complexity 3 89 0 786 297 45 42 chr2 220085477 220085597 -30602257 - L1MEd LINE L1 -4574 1736 1618 1989 128 0 20 chr2 220085597 220085903 -30601951 + AluSg SINE Alu 1 300 -10 786 297 45 42 chr2 220085903 220086480 -30601374 - L1MEd LINE L1 -4692 1618 997 28 0 0 0 chr2 220088269 220088297 -30599557 + AT_rich Low_complexity Low_complexity 1 28 0 206 372 99 0 chr2 220088383 220088504 -30599350 - L2 LINE L2 0 3272 3140 294 143 0 0 chr2 220089198 220089247 -30598607 + (TG)n Simple_repeat Simple_repeat 2 50 0 1823 155 35 25 chr2 220089778 220090146 -30597708 + THE1C LTR MaLR 1 372 -3 6408 115 54 1 chr2 220090157 220091119 -30596735 + THE1C-int LTR MaLR 1 1013 -567 26134 135 19 8 chr2 220091218 220093150 -30594704 - MER52-int LTR ERV1 -704 6387 4477 3373 81 7 18 chr2 220093150 220093608 -30594246 + MLT2A2 LTR ERVL 1 453 0 26134 135 19 8 chr2 220093608 220095622 -30592232 - MER52-int LTR ERV1 -2614 4477 2400 406 73 0 0 chr2 220095624 220095679 -30592175 - MLT2A2 LTR ERVL 0 453 399 304 288 63 36 chr2 220095680 220095791 -30592063 - L1MC4 LINE L1 -1314 6728 6615 * 331 281 22 0 chr2 220095775 220095864 -30591990 + L1MC4 LINE L1 6615 6705 -1337 457 196 17 12 chr2 220095874 220096047 -30591807 + (TA)n Simple_repeat Simple_repeat 2 175 0 2935 95 2 5 chr2 220096063 220096462 -30591392 - MLT2A1 LTR ERVL -46 398 1 4767 72 5 20 chr2 220096462 220097101 -30590753 - HERVL-A1 LTR ERVL 0 5654 5026 216 0 0 0 chr2 220097330 220097354 -30590500 + (T)n Simple_repeat Simple_repeat 1 24 0 436 168 140 19 chr2 220097700 220097807 -30590047 - MIR SINE MIR -40 222 103 257 284 0 68 chr2 220099006 220099094 -30588760 - L2 LINE L2 -23 3249 3168 261 0 0 0 chr2 220100280 220100309 -30587545 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2001 147 7 0 chr2 220100684 220100976 -30586878 - AluSx SINE Alu -17 295 2 1319 186 152 22 chr2 220101604 220101926 -30585928 - MLT1A1 LTR MaLR 0 365 2 3677 230 115 62 chr2 220101927 220103261 -30584593 - MLT1A1-int LTR MaLR 0 1735 330 2883 16 0 0 chr2 220103924 220104242 -30583612 + AluYb8 SINE Alu 1 318 0 2105 138 0 0 chr2 220105043 220105341 -30582513 + AluSx SINE Alu 1 298 -14 964 202 0 0 chr2 220105620 220105793 -30582061 - L1PA16 LINE L1 -20 6146 5974 4105 149 17 11 chr2 220105808 220106511 -30581343 + L1PA16 LINE L1 5254 5960 -206 1857 161 19 54 chr2 220106954 220107431 -30580423 - MER31A LTR ERV1 -10 475 1 2304 80 0 3 chr2 220109169 220109481 -30578373 - AluY SINE Alu 0 311 1 222 390 93 20 chr2 220109544 220109790 -30578064 + L2 LINE L2 2549 2812 -502 201 74 0 0 chr2 220110348 220110375 -30577479 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 21 57 0 0 chr2 220110511 220110546 -30577308 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr2 220112584 220112609 -30575245 + AT_rich Low_complexity Low_complexity 1 25 0 3471 98 65 21 chr2 220113146 220113716 -30574138 + LTR49 LTR ERV1 1 595 0 21 0 0 0 chr2 220113802 220113823 -30574031 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 220114439 220114460 -30573394 + AT_rich Low_complexity Low_complexity 1 21 0 2111 164 11 63 chr2 220114745 220115103 -30572751 + Tigger2a DNA MER2_type 1 332 -2376 1841 124 52 0 chr2 220115103 220115394 -30572460 - AluSg SINE Alu 0 305 1 2111 164 11 63 chr2 220115394 220115492 -30572362 + Tigger2a DNA MER2_type 332 434 0 24 53 0 0 chr2 220115512 220115550 -30572304 + AT_rich Low_complexity Low_complexity 1 38 0 244 271 17 0 chr2 220115863 220115922 -30571932 - L2 LINE L2 -4 3268 3209 1856 228 120 15 chr2 220116226 220116809 -30571045 - LTR48B LTR ERV1 0 644 1 1297 149 14 27 chr2 220117021 220117242 -30570612 + MER7A DNA MER2_type 2 217 -129 2004 154 33 27 chr2 220117243 220117580 -30570274 - MER1B DNA MER1_type 0 339 1 619 197 25 16 chr2 220117580 220117701 -30570153 + MER7A DNA MER2_type 210 331 -6 2136 95 0 14 chr2 220117758 220118054 -30569800 + AluSc SINE Alu 1 292 -17 328 273 39 78 chr2 220118409 220118563 -30569291 - MLT1I LTR MaLR -30 379 232 181 339 32 0 chr2 220118588 220118650 -30569204 + L2 LINE L2 3134 3197 -75 474 315 63 26 chr2 220118650 220118999 -30568855 - L1M4 LINE L1 -789 5357 4996 1782 106 117 8 chr2 220119334 220119599 -30568255 - AluSg1 SINE Alu -15 294 1 194 349 46 37 chr2 220119773 220119882 -30567972 + L2 LINE L2 3145 3254 -18 48 0 0 0 chr2 220120317 220120365 -30567489 + AT_rich Low_complexity Low_complexity 1 48 0 376 256 94 28 chr2 220120494 220120674 -30567180 - L1MC5 LINE L1 -48 7913 7722 903 100 0 0 chr2 220120676 220120796 -30567058 - AluY SINE Alu -14 297 178 712 154 0 0 chr2 220120796 220120900 -30566954 + FLAM_C SINE Alu 21 124 -19 2032 123 0 3 chr2 220120904 220121196 -30566658 - AluY SINE Alu -20 291 1 1359 264 99 26 chr2 220121222 220121938 -30565916 - L1ME3 LINE L1 -8 6154 5368 4471 21 2 0 chr2 220123589 220124109 -30563745 - L1PA4 LINE L1 -8 6147 5627 1968 78 14 14 chr2 220124109 220124390 -30563464 - AluY SINE Alu -30 281 1 28 0 0 0 chr2 220125533 220125561 -30562293 + AT_rich Low_complexity Low_complexity 1 28 0 3223 129 53 31 chr2 220125572 220125961 -30561893 + LTR49 LTR ERV1 1 409 -186 3339 153 24 0 chr2 220125961 220126502 -30561352 - MER41C LTR ERV1 0 554 1 3223 129 53 31 chr2 220126502 220126692 -30561162 + LTR49 LTR ERV1 409 593 -2 533 294 178 5 chr2 220127786 220128000 -30559854 + L2 LINE L2 2210 2460 -854 494 107 0 0 chr2 220128000 220128075 -30559779 + HY3 scRNA scRNA 26 100 -1 2049 88 39 14 chr2 220128096 220128380 -30559474 - AluSq SINE Alu -22 291 1 1795 280 86 29 chr2 220128393 220129221 -30558633 + L2 LINE L2 2446 3313 0 439 271 43 21 chr2 220130358 220130498 -30557356 - MIR SINE MIR -34 228 86 205 232 183 37 chr2 220130519 220130601 -30557253 - L2 LINE L2 -14 3299 3206 2053 123 13 7 chr2 220130718 220131028 -30556826 + AluSx SINE Alu 1 312 0 413 248 43 43 chr2 220131269 220131300 -30556554 - MIR SINE MIR -82 180 150 1323 78 6 0 chr2 220131300 220131480 -30556374 + L1PA8 LINE L1 5992 6172 0 413 248 43 43 chr2 220131480 220131589 -30556265 - MIR SINE MIR -111 151 40 218 340 50 43 chr2 220131980 220132121 -30555733 - MER5A DNA MER1_type -6 183 42 344 172 0 62 chr2 220132690 220132754 -30555100 + Alu SINE Alu 1 55 -247 1824 154 3 7 chr2 220132762 220133048 -30554806 - AluSq SINE Alu -28 285 1 838 179 0 0 chr2 220133066 220133211 -30554643 + FRAM SINE Alu 1 137 -39 205 289 57 91 chr2 220133486 220133749 -30554105 + L2 LINE L2 2933 3186 -127 23 0 0 0 chr2 220134050 220134073 -30553781 + AT_rich Low_complexity Low_complexity 1 23 0 4281 171 47 12 chr2 220134484 220135593 -30552261 + L1MA5 LINE L1 4955 6116 -184 1937 160 0 0 chr2 220136242 220136535 -30551319 - AluSx SINE Alu -17 295 3 2954 136 17 0 chr2 220136903 220137381 -30550473 + LTR19A LTR ERV1 1 486 0 4909 69 14 12 chr2 220138403 220139069 -30548785 + MER4E LTR ERV1 100 766 0 2133 211 70 19 chr2 220139344 220139819 -30548035 + LTR53 LTR ERVL 6 504 -15 859 52 0 0 chr2 220141180 220141295 -30546559 - L1P LINE L1 -2739 3407 3293 1589 141 23 30 chr2 220141404 220141523 -30546331 + L1MA5 LINE L1 5999 6117 -183 2606 68 0 0 chr2 220141523 220141833 -30546021 - AluY SINE Alu -1 310 1 1589 141 23 30 chr2 220141833 220142017 -30545837 + L1MA5 LINE L1 6117 6300 0 22 0 0 0 chr2 220142051 220142073 -30545781 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr2 220142416 220142459 -30545395 + AT_rich Low_complexity Low_complexity 1 43 0 308 348 50 33 chr2 220143028 220143209 -30544645 + MER5A DNA MER1_type 6 189 0 2499 177 11 11 chr2 220143395 220143847 -30544007 + LOR1b LTR ERV1 10 461 0 315 272 37 86 chr2 220145927 220146036 -30541818 + MIR SINE MIR 13 113 -149 2212 107 0 7 chr2 220146036 220146334 -30541520 - AluSx SINE Alu -16 296 1 315 272 37 86 chr2 220146334 220146386 -30541468 + MIR SINE MIR 113 166 -96 1050 139 188 15 chr2 220146386 220146588 -30541266 - MSTA LTR MaLR 0 428 192 772 80 0 18 chr2 220146588 220146701 -30541153 + L1MA1 LINE L1 6192 6302 0 362 276 135 10 chr2 220146712 220146904 -30540950 - L1M4 LINE L1 -917 6648 6433 2167 109 0 31 chr2 220146909 220147231 -30540623 - AluSx SINE Alu 0 312 1 302 325 118 37 chr2 220147411 220147734 -30540120 + HAL1 LINE L1 1031 1379 -1128 192 203 172 16 chr2 220148000 220148064 -30539790 - L2 LINE L2 -20 3252 3179 237 140 40 20 chr2 220148616 220148666 -30539188 + (TGAA)n Simple_repeat Simple_repeat 1 51 0 23 0 0 0 chr2 220149720 220149743 -30538111 + AT_rich Low_complexity Low_complexity 1 23 0 782 286 108 52 chr2 220150650 220151111 -30536743 + LTR33A LTR ERVL 8 494 -29 2224 111 0 0 chr2 220151111 220151408 -30536446 + AluSx SINE Alu 1 297 -15 317 296 71 64 chr2 220151866 220152133 -30535721 - L2 LINE L2 -138 3175 2907 180 0 0 0 chr2 220152260 220152280 -30535574 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 309 282 35 0 chr2 220152358 220152443 -30535411 - MIR SINE MIR -13 249 162 967 133 173 0 chr2 220152443 220152616 -30535238 + MSTA LTR MaLR 1 203 -225 9271 170 12 2 chr2 220152616 220154341 -30533513 - L1M4 LINE L1 -1116 6449 4708 3751 175 22 4 chr2 220154342 220155605 -30532249 - L1M4 LINE L1 -3303 4262 2977 15818 167 31 16 chr2 220155617 220156036 -30531818 - L1PB2 LINE L1 -1 6866 6455 2238 110 3 3 chr2 220156036 220156344 -30531510 - AluY SINE Alu -3 308 1 15818 167 31 16 chr2 220156344 220158767 -30529087 - L1PB2 LINE L1 -412 6455 4071 2265 90 3 3 chr2 220158767 220159066 -30528788 - AluY SINE Alu -12 299 1 15818 167 31 16 chr2 220159066 220162742 -30525112 - L1PB2 LINE L1 -2796 4071 251 1810 132 53 63 chr2 220162742 220163121 -30524733 - THE1C LTR MaLR 0 375 1 15818 167 31 16 chr2 220163121 220163374 -30524480 - L1PB2 LINE L1 -6616 251 3 1417 111 25 30 chr2 220163384 220163414 -30524440 - L1M4 LINE L1 -4569 2996 2967 3295 59 0 92 chr2 220163414 220163630 -30524224 + MLT2A1 LTR ERVL 1 149 -295 2078 18 0 0 chr2 220163630 220163858 -30523996 + AluYa5 SINE Alu 83 310 -1 3295 59 0 92 chr2 220163858 220164130 -30523724 + MLT2A1 LTR ERVL 149 444 0 1417 111 25 30 chr2 220164130 220164240 -30523614 - L1M4 LINE L1 -4598 2967 2855 207 0 0 0 chr2 220164240 220164263 -30523591 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1417 111 25 30 chr2 220164263 220164356 -30523498 - L1M4 LINE L1 -4710 2855 2763 567 0 0 0 chr2 220164357 220164420 -30523434 + (TA)n Simple_repeat Simple_repeat 1 63 0 291 54 0 0 chr2 220165011 220165048 -30522806 + (TA)n Simple_repeat Simple_repeat 2 38 0 13274 177 63 19 chr2 220165066 220165431 -30522423 - L1M4 LINE L1 -4809 2756 2408 2375 99 0 3 chr2 220165431 220165744 -30522110 - AluSq SINE Alu -1 312 1 13274 177 63 19 chr2 220165744 220168010 -30519844 - L1M4 LINE L1 -5157 2408 11 345 332 92 33 chr2 220168045 220168623 -30519231 + L1ME3A LINE L1 5258 5869 -301 273 29 0 0 chr2 220170248 220170282 -30517572 + (CA)n Simple_repeat Simple_repeat 1 34 0 1182 188 8 25 chr2 220171231 220171471 -30516383 - AluJo SINE Alu -5 307 72 695 222 14 21 chr2 220171767 220171911 -30515943 - MLT2F LTR ERVL -520 143 1 860 320 32 3 chr2 220172447 220172763 -30515091 - ERVL LTR ERVL -5087 677 353 2189 249 60 32 chr2 220172783 220173413 -30514441 - MLT2F LTR ERVL -15 648 1 545 276 221 0 chr2 220173729 220173910 -30513944 + MIR SINE MIR 11 231 -31 894 228 111 14 chr2 220174124 220174656 -30513198 - L1MC/D LINE L1 -774 5585 5002 25 51 0 0 chr2 220175591 220175630 -30512224 + AT_rich Low_complexity Low_complexity 1 39 0 279 0 0 0 chr2 220176015 220176046 -30511808 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2203 80 0 68 chr2 220176075 220176399 -30511455 + AluY SINE Alu 1 302 -9 21 0 0 0 chr2 220176520 220176541 -30511313 + AT_rich Low_complexity Low_complexity 1 21 0 1743 170 3 10 chr2 220176671 220176977 -30510877 + L1MC1 LINE L1 6030 6333 0 500 184 120 8 chr2 220177205 220177330 -30510524 + L1ME3A LINE L1 5953 6091 -79 1883 50 139 0 chr2 220177862 220178120 -30509734 - AluY SINE Alu -17 294 1 264 156 47 31 chr2 220178948 220179012 -30508842 + MIR SINE MIR 97 161 -101 193 212 0 0 chr2 220179016 220179049 -30508805 + L2 LINE L2 3214 3246 -26 476 264 238 5 chr2 220180149 220180342 -30507512 - MIR SINE MIR -10 252 15 2208 106 3 0 chr2 220180418 220180711 -30507143 + AluSc SINE Alu 1 294 -15 849 112 0 0 chr2 220181934 220182050 -30505804 - AluSc SINE Alu -14 295 180 230 81 27 0 chr2 220182058 220182095 -30505759 + (TATG)n Simple_repeat Simple_repeat 3 40 0 3952 110 5 49 chr2 220182101 220182735 -30505119 + LTR14B LTR ERVK 3 608 0 303 357 40 53 chr2 220183717 220184175 -30503679 - L2 LINE L2 -13 3259 2748 334 349 54 16 chr2 220185169 220185556 -30502298 + L1ME4a LINE L1 5512 5913 -208 2043 209 70 4 chr2 220185561 220186035 -30501819 - MLT1D LTR MaLR 0 505 1 343 256 0 0 chr2 220186049 220186127 -30501727 + MER94 DNA DNA 16 93 -41 411 279 81 57 chr2 220186215 220186462 -30501392 - HAL1 LINE L1 -1020 1487 1235 237 159 0 0 chr2 220186484 220186528 -30501326 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 216 67 0 0 chr2 220187033 220187063 -30500791 + (CA)n Simple_repeat Simple_repeat 2 31 0 2251 194 55 25 chr2 220187209 220187698 -30500156 + MER82 DNA MER2_type 11 514 -139 299 264 47 81 chr2 220188992 220189140 -30498714 + MIR3 SINE MIR 33 175 -33 21 0 0 0 chr2 220189548 220189569 -30498285 + AT_rich Low_complexity Low_complexity 1 21 0 2073 112 29 0 chr2 220189595 220189900 -30497954 - AluSx SINE Alu 0 313 1 266 0 29 0 chr2 220190286 220190320 -30497534 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2022 104 0 31 chr2 220190321 220190609 -30497245 - AluY SINE Alu -32 279 1 21 36 0 0 chr2 220191214 220191242 -30496612 + AT_rich Low_complexity Low_complexity 1 28 0 2168 96 10 10 chr2 220191663 220191956 -30495898 - AluY SINE Alu -18 293 1 35 24 0 0 chr2 220192026 220192068 -30495786 + AT_rich Low_complexity Low_complexity 1 42 0 251 191 16 0 chr2 220193883 220193946 -30493908 + CT-rich Low_complexity Low_complexity 1 64 0 916 91 8 0 chr2 220194379 220194511 -30493343 - AluY SINE Alu 0 311 179 21 0 0 0 chr2 220195297 220195318 -30492536 + AT_rich Low_complexity Low_complexity 1 21 0 27 49 0 0 chr2 220195503 220195544 -30492310 + AT_rich Low_complexity Low_complexity 1 41 0 16460 34 2 0 chr2 220195917 220198662 -30489192 - L1PA3 LINE L1 -4 6151 3403 10212 34 0 0 chr2 220198662 220199918 -30487936 + L1P LINE L1 2002 3257 -2889 259 307 59 35 chr2 220250122 220250324 -30437530 + L1MCc LINE L1 74 280 -6143 599 295 61 62 chr2 220250402 220250768 -30437086 + L1MCc LINE L1 993 1354 -5211 1660 237 47 7 chr2 220250768 220251215 -30436639 + MLT1C LTR MaLR 3 467 0 599 295 61 62 chr2 220251215 220251540 -30436314 + L1MCc LINE L1 1354 1678 -4887 2123 118 7 7 chr2 220251543 220251848 -30436006 + AluSg1 SINE Alu 1 305 -4 454 198 9 0 chr2 220251935 220252041 -30435813 + L1MA5 LINE L1 6184 6290 -10 384 243 89 12 chr2 220252203 220252372 -30435482 + L1MCc LINE L1 1299 1480 -4943 710 236 23 81 chr2 220252597 220252945 -30434909 - L1M1 LINE L1 -4119 3446 3119 468 0 0 0 chr2 220253957 220254009 -30433845 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 180 111 0 0 chr2 220255162 220255189 -30432665 + (CACG)n Simple_repeat Simple_repeat 4 30 0 24 32 0 0 chr2 220255710 220255741 -30432113 + AT_rich Low_complexity Low_complexity 1 31 0 806 193 61 33 chr2 220255814 220256026 -30431828 + AluJo SINE Alu 85 302 -10 516 105 0 0 chr2 220256026 220256102 -30431752 + (GGGA)n Simple_repeat Simple_repeat 1 76 0 434 338 122 11 chr2 220256126 220256413 -30431441 + L3 LINE CR1 850 1168 -409 267 105 0 0 chr2 220256432 220256470 -30431384 - L1P2 LINE L1 -378 5776 5739 322 89 22 0 chr2 220256470 220256515 -30431339 + L1P4 LINE L1 5679 5724 -441 4202 223 56 4 chr2 220256958 220257843 -30430011 + L1M4 LINE L1 4281 5248 -930 1921 144 10 7 chr2 220257843 220258148 -30429706 + AluSq SINE Alu 1 306 -7 4202 223 56 4 chr2 220258148 220258513 -30429341 + L1M4 LINE L1 5248 5593 -585 2161 82 6 35 chr2 220258666 220258984 -30428870 - AluSq SINE Alu -4 309 1 2371 52 0 0 chr2 220259036 220259324 -30428530 - AluY SINE Alu -23 288 1 374 271 97 28 chr2 220259345 220259489 -30428365 + L2 LINE L2 3160 3313 0 343 272 89 35 chr2 220259670 220260050 -30427804 - L1MEd LINE L1 -4714 1668 1273 226 317 67 34 chr2 220260047 220260255 -30427599 - L1MEd LINE L1 -5346 1026 812 * 2288 110 0 0 chr2 220261364 220261664 -30426190 - AluSq SINE Alu -13 300 1 5171 150 44 14 chr2 220262436 220262647 -30425207 + Tigger3b DNA MER2_type 1 204 -2824 2287 99 0 3 chr2 220262647 220262949 -30424905 + AluSx SINE Alu 3 303 -9 5171 150 44 14 chr2 220262949 220263678 -30424176 + Tigger3b DNA MER2_type 204 969 -262 917 147 7 20 chr2 220263794 220263944 -30423910 - THE1C LTR MaLR -227 148 1 489 281 198 9 chr2 220265316 220265533 -30422321 - MIR SINE MIR 0 262 5 306 329 127 24 chr2 220265706 220265911 -30421943 - L2 LINE L2 -560 2754 2517 516 72 0 0 chr2 220265911 220265980 -30421874 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 306 329 127 24 chr2 220265980 220266026 -30421828 - L2 LINE L2 -797 2517 2477 192 260 0 0 chr2 220266084 220266134 -30421720 + MIR SINE MIR 164 213 -49 356 288 68 40 chr2 220266190 220266367 -30421487 + MIR SINE MIR 77 258 -4 300 327 64 0 chr2 220266875 220267031 -30420823 - Tigger8 DNA MER2_type -397 269 104 25 31 0 0 chr2 220267728 220267760 -30420094 + AT_rich Low_complexity Low_complexity 1 32 0 2314 75 3 19 chr2 220267848 220268156 -30419698 - AluY SINE Alu -7 304 2 242 225 191 34 chr2 220268216 220268305 -30419549 - MER5A DNA MER1_type -78 111 9 205 250 21 0 chr2 220268512 220268560 -30419294 + MIR SINE MIR 97 145 -117 2446 91 5 23 chr2 220268562 220269005 -30418849 + L1P3 LINE L1 5008 5445 -709 6344 143 63 63 chr2 220269005 220270330 -30417524 + pTR5 LTR ERV1 743 2067 -371 5531 67 1 0 chr2 220270334 220271041 -30416813 + L1PA7 LINE L1 5442 6149 -5 2177 94 0 44 chr2 220271043 220271362 -30416492 + AluY SINE Alu 1 305 -6 1759 112 8 0 chr2 220271515 220271764 -30416090 - AluSq SINE Alu -62 251 1 888 178 14 0 chr2 220273269 220273415 -30414439 - MLT1A1 LTR MaLR -213 152 5 2443 87 3 0 chr2 220274861 220275172 -30412682 + AluSx SINE Alu 1 312 0 1616 177 32 3 chr2 220275400 220275683 -30412171 - AluJb SINE Alu -15 297 7 1753 233 40 39 chr2 220275821 220276315 -30411539 - LTR42 LTR ERVL 0 495 1 902 295 29 18 chr2 220276468 220276749 -30411105 + LTR16C LTR ERVL 104 387 -104 606 313 84 59 chr2 220277591 220278180 -30409674 - L2 LINE L2 -50 3263 2656 2177 106 0 3 chr2 220278207 220278515 -30409339 - AluSq SINE Alu 0 307 1 233 309 123 69 chr2 220278520 220278724 -30409130 - MLT1J2 LTR MaLR -35 415 201 591 208 25 8 chr2 220278773 220278893 -30408961 - MLT1J2 LTR MaLR -328 122 1 2575 58 0 6 chr2 220278960 220279273 -30408581 + AluY SINE Alu 1 311 0 1152 225 17 20 chr2 220280214 220280541 -30407313 + AluY SINE Alu 1 326 0 275 297 64 55 chr2 220280880 220281044 -30406810 + MIR SINE MIR 42 211 -51 2446 208 108 17 chr2 220282051 220282774 -30405080 - L1MCa LINE L1 -4754 1810 1022 2360 92 0 10 chr2 220282774 220283080 -30404774 - AluSq SINE Alu -10 303 1 2525 95 95 5 chr2 220283092 220283483 -30404371 - L1PA11 LINE L1 0 6174 5749 3365 125 1 175 chr2 220283483 220284401 -30403453 - L1PA11 LINE L1 -941 5205 4448 3181 121 23 0 chr2 220284399 220284939 -30402915 - L1P4 LINE L1 -421 5753 5204 * 1267 249 62 86 chr2 220284946 220285513 -30402341 - L1MCa LINE L1 -5492 553 1 896 180 34 46 chr2 220286534 220286773 -30401081 - MER106A DNA MER1_type 0 236 1 283 365 40 0 chr2 220286835 220286961 -30400893 + MIR SINE MIR 29 159 -103 664 311 54 61 chr2 220286964 220287408 -30400446 - MLT1J1 LTR MaLR -3 443 3 208 310 31 85 chr2 220287602 220287731 -30400123 - MIR3 SINE MIR -73 135 14 21 36 0 0 chr2 220287814 220287842 -30400012 + AT_rich Low_complexity Low_complexity 1 28 0 1987 118 22 0 chr2 220287915 220288187 -30399667 - AluSx SINE Alu -13 299 22 2226 107 0 3 chr2 220288327 220288626 -30399228 - AluSq SINE Alu -15 298 1 24 0 0 0 chr2 220288734 220288758 -30399096 + AT_rich Low_complexity Low_complexity 1 24 0 2697 32 0 3 chr2 220289097 220289408 -30398446 - AluY SINE Alu -1 310 1 978 162 27 27 chr2 220289825 220290010 -30397844 - Tigger7 DNA MER2_type -1 2486 2302 538 273 65 40 chr2 220290335 220290657 -30397197 + MLT1I LTR MaLR 1 370 -39 2069 136 3 0 chr2 220291220 220291521 -30396333 - AluSx SINE Alu -10 302 1 24 53 0 0 chr2 220291542 220291580 -30396274 + AT_rich Low_complexity Low_complexity 1 38 0 276 301 168 14 chr2 220292808 220292951 -30394903 - MIR SINE MIR -3 259 95 475 203 129 28 chr2 220293498 220293782 -30394072 - L1MEc LINE L1 -3795 2420 2151 1393 199 80 29 chr2 220294227 220294639 -30393215 + Tigger3(Golem) DNA MER2_type 2596 3028 -1 2132 103 13 3 chr2 220295691 220295993 -30391861 + AluSc SINE Alu 5 309 0 29 84 0 0 chr2 220296059 220296130 -30391724 + AT_rich Low_complexity Low_complexity 1 71 0 23 0 0 0 chr2 220297285 220297308 -30390546 + AT_rich Low_complexity Low_complexity 1 23 0 29 60 0 0 chr2 220297920 220297970 -30389884 + AT_rich Low_complexity Low_complexity 1 50 0 2962 208 60 13 chr2 220297997 220298795 -30389059 - MER73 LTR ERVL 0 644 2 355 295 83 23 chr2 220298884 220299101 -30388753 - HAL1 LINE L1 -113 2394 2165 21 36 0 0 chr2 220299103 220299131 -30388723 + AT_rich Low_complexity Low_complexity 1 28 0 2444 69 0 10 chr2 220299828 220300132 -30387722 - AluY SINE Alu -10 301 1 205 300 83 0 chr2 220300951 220301011 -30386843 + MER5A DNA MER1_type 123 187 -2 22 80 0 0 chr2 220301424 220301474 -30386380 + AT_rich Low_complexity Low_complexity 1 50 0 308 344 111 6 chr2 220302398 220302659 -30385195 - L2 LINE L2 -33 3280 2455 193 228 35 35 chr2 220302830 220302887 -30384967 - MIR SINE MIR -112 96 40 1835 111 7 50 chr2 220303019 220303298 -30384556 + AluSx SINE Alu 1 267 -45 1481 224 80 19 chr2 220303791 220304305 -30383549 + L1 LINE L1 4229 4773 -1373 * 10687 190 72 37 chr2 220304293 220306576 -30381278 + L1MB1 LINE L1 5 2207 -4175 2080 136 0 3 chr2 220306576 220306877 -30380977 + AluSc SINE Alu 1 300 -9 10687 190 72 37 chr2 220306877 220307536 -30380318 + L1MB1 LINE L1 2207 2842 -3540 1366 226 82 40 chr2 220307536 220307916 -30379938 - MSTD LTR MaLR 0 396 1 10687 190 72 37 chr2 220307916 220308398 -30379456 + L1MB1 LINE L1 2842 3544 -2838 973 196 11 25 chr2 220308377 220308401 -30379453 + L1MB1 LINE L1 3898 3921 -2461 * 2317 89 3 19 chr2 220308401 220308717 -30379137 + AluY SINE Alu 1 311 0 973 196 11 25 chr2 220308717 220308967 -30378887 + L1MB1 LINE L1 3921 4168 -2214 1057 207 24 12 chr2 220308968 220309214 -30378640 + L1MB3 LINE L1 5933 6181 -2 2600 193 19 6 chr2 220309234 220310187 -30377667 + L1MB1 LINE L1 4999 5964 -440 1633 148 72 0 chr2 220310198 220310503 -30377351 + L1MB1 LINE L1 6078 6404 0 2178 89 0 7 chr2 220311908 220312213 -30375641 + AluSc SINE Alu 1 303 0 180 0 0 0 chr2 220312416 220312436 -30375418 + (TG)n Simple_repeat Simple_repeat 2 21 0 1132 215 45 0 chr2 220312958 220313223 -30374631 + L1MB7 LINE L1 5892 6168 -16 1155 237 129 19 chr2 220313265 220313834 -30374020 - MER76 LTR ERV 0 688 1 310 145 14 14 chr2 220314165 220314234 -30373620 + (CATA)n Simple_repeat Simple_repeat 2 70 0 1982 178 73 14 chr2 220314704 220315331 -30372523 - MER39 LTR ERV1 0 707 1 2000 124 16 10 chr2 220315343 220315650 -30372204 + AluSg SINE Alu 2 310 0 406 269 172 16 chr2 220315678 220315864 -30371990 + MIR SINE MIR 2 216 -46 362 322 100 55 chr2 220316244 220316300 -30371554 + HAL1b LINE L1 361 413 -935 2412 89 0 0 chr2 220316300 220316603 -30371251 + AluSg SINE Alu 1 303 -7 362 322 100 55 chr2 220316603 220316875 -30370979 + HAL1b LINE L1 413 704 -644 20695 162 41 16 chr2 220317048 220323384 -30364470 + L1MA3 LINE L1 9 6566 -1158 6282 75 5 27 chr2 220323384 220323985 -30363869 + L1PA8A LINE L1 4811 5424 -707 2116 111 4 0 chr2 220323985 220324303 -30363551 + AluSp SINE Alu 6 324 0 6282 75 5 27 chr2 220324303 220325039 -30362815 + L1PA8A LINE L1 5424 6130 -1 20695 162 41 16 chr2 220325039 220326228 -30361626 + L1MA3 LINE L1 6566 7724 0 23 33 0 0 chr2 220326255 220326285 -30361569 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr2 220326945 220326980 -30360874 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 220327033 220327054 -30360800 + AT_rich Low_complexity Low_complexity 1 21 0 1109 202 5 5 chr2 220327355 220327568 -30360286 + AluJb SINE Alu 91 303 -9 2021 94 3 72 chr2 220327571 220327873 -30359981 + AluSx SINE Alu 10 291 -17 186 118 0 0 chr2 220327873 220327907 -30359947 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 847 210 13 0 chr2 220327932 220328089 -30359765 + FRAM SINE Alu 1 159 -7 197 232 213 77 chr2 220328125 220328280 -30359574 - L2 LINE L2 -11 3302 3127 1721 161 68 25 chr2 220328631 220328985 -30358869 - THE1C LTR MaLR -4 371 3 2255 214 149 5 chr2 220329011 220329650 -30358204 - LTR48 LTR ERV1 0 787 57 4119 121 35 40 chr2 220329658 220330363 -30357491 - L1PA16 LINE L1 -9 6157 5456 371 82 0 16 chr2 220330365 220330426 -30357428 + (TA)n Simple_repeat Simple_repeat 2 61 0 22 56 0 0 chr2 220331118 220331154 -30356700 + AT_rich Low_complexity Low_complexity 1 36 0 927 254 38 23 chr2 220331159 220331502 -30356352 + L1ME3A LINE L1 5594 5941 -229 256 214 228 21 chr2 220331517 220331662 -30356192 + L1ME3A LINE L1 5987 6161 -9 1251 231 47 12 chr2 220332154 220332492 -30355362 - L1ME1 LINE L1 -5 6161 5812 998 238 127 23 chr2 220332479 220332826 -30355028 - L1MCc LINE L1 -3373 3568 3173 * 2102 118 4 0 chr2 220332826 220333128 -30354726 - AluSg SINE Alu 0 305 3 998 238 127 23 chr2 220333128 220333174 -30354680 - L1MCc LINE L1 -3768 3173 3133 2043 176 50 20 chr2 220333178 220333582 -30354272 + MLT2C2 LTR ERVL 1 416 -48 234 267 0 13 chr2 220333587 220333662 -30354192 + CT-rich Low_complexity Low_complexity 1 74 0 356 265 20 20 chr2 220333686 220333788 -30354066 - L1MCc LINE L1 -5533 890 789 315 309 8 40 chr2 220333930 220334056 -30353798 - L1MCc LINE L1 -5653 770 649 989 273 50 31 chr2 220334172 220334593 -30353261 - L1MCc LINE L1 -5978 445 17 271 0 51 0 chr2 220334985 220335024 -30352830 + (TA)n Simple_repeat Simple_repeat 1 41 0 2163 179 222 22 chr2 220335261 220335332 -30352522 - MER39 LTR ERV1 -4 703 647 2553 107 3 0 chr2 220335332 220335686 -30352168 + THE1A LTR MaLR 1 355 0 2163 179 222 22 chr2 220335686 220336200 -30351654 - MER39 LTR ERV1 -60 647 1 200 310 138 11 chr2 220336578 220336665 -30351189 - MIR SINE MIR -142 120 23 1977 139 13 7 chr2 220338028 220338337 -30349517 - AluSq SINE Alu -2 311 1 1245 207 19 70 chr2 220339051 220339365 -30348489 + MLT1D LTR MaLR 1 298 -207 555 184 10 0 chr2 220339363 220339461 -30348393 - MER34C LTR ERV1 -486 99 1 * 2201 112 0 3 chr2 220339600 220339896 -30347958 - AluSx SINE Alu -17 295 1 1250 164 50 23 chr2 220339975 220340401 -30347453 - LTR54 LTR ERV1 -2 508 1 23 78 0 0 chr2 220343935 220343986 -30343868 + AT_rich Low_complexity Low_complexity 1 51 0 1334 192 10 78 chr2 220344204 220344511 -30343343 - AluJo SINE Alu -26 286 1 463 79 26 0 chr2 220344536 220344612 -30343242 - L1HS LINE L1 0 6155 6078 2201 121 0 0 chr2 220344990 220345295 -30342559 + AluSx SINE Alu 1 305 -7 31 26 0 0 chr2 220345354 220345392 -30342462 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr2 220346112 220346142 -30341712 + AT_rich Low_complexity Low_complexity 1 30 0 24 77 0 0 chr2 220346560 220346612 -30341242 + AT_rich Low_complexity Low_complexity 1 52 0 2227 104 0 3 chr2 220346618 220346917 -30340937 - AluSc SINE Alu -11 298 1 254 202 22 56 chr2 220347187 220347276 -30340578 - MLT1H LTR MaLR -91 458 373 234 286 123 53 chr2 220347297 220347468 -30340386 - MLT1I LTR MaLR -122 287 105 235 179 45 15 chr2 220347697 220347764 -30340090 + (TA)n Simple_repeat Simple_repeat 1 69 0 31 0 0 0 chr2 220347988 220348019 -30339835 + AT_rich Low_complexity Low_complexity 1 31 0 1641 228 81 16 chr2 220348161 220348676 -30339178 - MLT1E2 LTR MaLR 0 626 28 2262 174 26 19 chr2 220348676 220349095 -30338759 - MSTB LTR MaLR 0 426 5 210 37 0 0 chr2 220349284 220349311 -30338543 + (CA)n Simple_repeat Simple_repeat 2 28 0 1897 172 28 42 chr2 220350423 220350848 -30337006 - MSTB1 LTR MaLR -13 419 1 2037 176 188 10 chr2 220351680 220352175 -30335679 - MER39 LTR ERV1 -9 698 116 21 0 0 0 chr2 220352398 220352419 -30335435 + AT_rich Low_complexity Low_complexity 1 21 0 1964 115 21 0 chr2 220352659 220352938 -30334916 + AluSx SINE Alu 7 291 -21 674 324 69 21 chr2 220353670 220354249 -30333605 + L2 LINE L2 2607 3225 -88 471 271 131 36 chr2 220355757 220355978 -30331876 - MIR SINE MIR 0 262 21 511 337 45 29 chr2 220355989 220356232 -30331622 - MIR SINE MIR -9 253 7 1183 199 9 0 chr2 220356253 220356474 -30331380 + MER58A DNA MER1_type 2 224 0 579 281 20 20 chr2 220356738 220356891 -30330963 + MIR SINE MIR 18 170 -92 275 250 0 14 chr2 220356895 220356967 -30330887 + Tigger1 DNA MER2_type 1 71 -2347 1850 150 77 14 chr2 220356967 220357320 -30330534 - THE1C LTR MaLR 0 375 1 5894 120 33 7 chr2 220357320 220358226 -30329628 - THE1C-int LTR MaLR 0 1580 651 6720 196 141 20 chr2 220358230 220358378 -30329476 + Tigger1 DNA MER2_type 834 963 -1455 2062 114 0 0 chr2 220358378 220358658 -30329196 + AluSx SINE Alu 11 290 -22 6720 196 141 20 chr2 220358658 220359923 -30327931 + Tigger1 DNA MER2_type 963 2418 0 2275 123 0 0 chr2 220360178 220360487 -30327367 + AluSg SINE Alu 2 310 0 262 336 30 17 chr2 220360857 220361152 -30326702 + AluY SINE Alu 3 301 0 313 351 26 26 chr2 220361590 220361744 -30326110 + MIR SINE MIR 13 166 -96 392 298 69 8 chr2 220361753 220361884 -30325970 - L2 LINE L2 -2 3311 3173 243 0 0 0 chr2 220361946 220361973 -30325881 + (ATG)n Simple_repeat Simple_repeat 3 29 0 198 0 0 0 chr2 220362295 220362317 -30325537 + (TA)n Simple_repeat Simple_repeat 2 23 0 344 292 0 0 chr2 220362322 220362411 -30325443 + L1MC4 LINE L1 6615 6703 -1339 213 224 0 0 chr2 220362415 220362473 -30325381 + (TA)n Simple_repeat Simple_repeat 2 59 0 316 342 7 54 chr2 220364137 220364286 -30323568 - MIR3 SINE MIR -45 163 22 24 0 0 0 chr2 220365367 220365391 -30322463 + AT_rich Low_complexity Low_complexity 1 24 0 675 293 99 54 chr2 220366894 220367540 -30320314 + L1M4 LINE L1 2473 3147 -2999 279 186 31 0 chr2 220367583 220367680 -30320174 + (TA)n Simple_repeat Simple_repeat 1 100 0 205 149 21 21 chr2 220367816 220367863 -30319991 + (TA)n Simple_repeat Simple_repeat 1 47 0 186 43 0 0 chr2 220368040 220368063 -30319791 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 417 254 58 29 chr2 220369370 220369508 -30318346 + MIR SINE MIR 120 261 -1 2450 65 0 7 chr2 220369554 220369863 -30317991 + AluY SINE Alu 1 307 -4 5948 139 58 7 chr2 220370075 220371184 -30316670 - Tigger3b DNA MER2_type -66 1165 1 1266 219 94 6 chr2 220371185 220371527 -30316327 + L1MB8 LINE L1 5783 6154 -24 2487 143 41 5 chr2 220371717 220372130 -30315724 - MSTA LTR MaLR 0 428 1 222 329 118 24 chr2 220372825 220372995 -30314859 + MIR SINE MIR 21 206 -56 21 0 0 0 chr2 220373458 220373479 -30314375 + AT_rich Low_complexity Low_complexity 1 21 0 2220 89 3 3 chr2 220374477 220374768 -30313086 + AluSq SINE Alu 7 297 -16 1217 111 0 0 chr2 220374951 220375122 -30312732 + AluSg/x SINE Alu 137 307 -5 181 310 78 39 chr2 220375130 220375259 -30312595 - L2 LINE L2 -1906 1408 1275 30 27 0 0 chr2 220377131 220377168 -30310686 + AT_rich Low_complexity Low_complexity 1 37 0 312 332 27 11 chr2 220379830 220380017 -30307837 - L1MC/D LINE L1 -2165 5643 5454 26 30 0 0 chr2 220380039 220380072 -30307782 + AT_rich Low_complexity Low_complexity 1 33 0 1160 79 0 0 chr2 220380459 220380611 -30307243 - L1PA10 LINE L1 -1 6167 6016 2083 90 28 7 chr2 220381675 220381963 -30305891 - AluSc SINE Alu -15 294 1 30 27 0 0 chr2 220382379 220382416 -30305438 + AT_rich Low_complexity Low_complexity 1 37 0 192 394 14 0 chr2 220382672 220382743 -30305111 - L2 LINE L2 -13 3259 3188 249 33 0 0 chr2 220383041 220383071 -30304783 + (T)n Simple_repeat Simple_repeat 1 30 0 264 302 101 22 chr2 220383593 220383732 -30304122 - L3 LINE CR1 -3 1574 1425 27 0 0 0 chr2 220383751 220383778 -30304076 + AT_rich Low_complexity Low_complexity 1 27 0 304 273 120 62 chr2 220383970 220384179 -30303675 - L1MC4 LINE L1 -2145 5897 5677 404 139 23 47 chr2 220384367 220384453 -30303401 - L1HS LINE L1 0 6155 6072 * 3199 14 0 0 chr2 220384412 220384777 -30303077 + L1HS LINE L1 5767 6131 -24 238 221 26 39 chr2 220384994 220385071 -30302783 + MIR SINE MIR 110 185 -77 201 196 0 0 chr2 220385447 220385493 -30302361 + CT-rich Low_complexity Low_complexity 3 48 0 24 0 0 0 chr2 220385493 220385517 -30302337 + AT_rich Low_complexity Low_complexity 1 24 0 234 91 0 0 chr2 220387108 220387141 -30300713 + (A)n Simple_repeat Simple_repeat 1 33 0 380 278 33 99 chr2 220387806 220388018 -30299836 + MLT1L LTR MaLR 1 198 -417 23 0 0 0 chr2 220388298 220388321 -30299533 + AT_rich Low_complexity Low_complexity 1 23 0 2208 114 0 25 chr2 220389861 220390001 -30297853 + AluSx SINE Alu 1 143 -169 2167 57 3 7 chr2 220390001 220390284 -30297570 + AluY SINE Alu 11 292 -19 2208 114 0 25 chr2 220390284 220390460 -30297394 + AluSx SINE Alu 143 309 -3 1731 246 43 29 chr2 220391135 220391627 -30296227 - MLT1D LTR MaLR -2 503 5 1804 216 18 37 chr2 220391960 220392396 -30295458 + L1MA10 LINE L1 5894 6321 -13 297 235 157 10 chr2 220392525 220392627 -30295227 + L1ME2 LINE L1 4775 4891 -1255 351 288 8 0 chr2 220392629 220392754 -30295100 + L1ME2 LINE L1 5006 5131 -1015 509 132 13 0 chr2 220392769 220392845 -30295009 - 5S rRNA rRNA -32 89 13 6688 126 24 1 chr2 220392845 220394004 -30293850 + L1PA10 LINE L1 4293 5471 -697 2923 117 11 4 chr2 220394117 220394572 -30293282 + L1PA10 LINE L1 5706 6163 -5 1959 217 46 60 chr2 220394633 220395218 -30292636 + L1ME2 LINE L1 5536 6112 -52 275 190 86 0 chr2 220395219 220395277 -30292577 + L1ME2 LINE L1 6076 6138 -26 299 268 65 16 chr2 220395279 220395402 -30292452 - LTR67 LTR ERVL 0 557 429 830 346 109 46 chr2 220395836 220396731 -30291123 + L2 LINE L2 1785 2736 -578 223 359 83 35 chr2 220397081 220397226 -30290628 + L2 LINE L2 3104 3255 -17 216 0 0 0 chr2 220397351 220397375 -30290479 + (TG)n Simple_repeat Simple_repeat 1 24 0 1155 189 161 23 chr2 220397385 220397645 -30290209 - AluJb SINE Alu -6 296 1 26 50 0 0 chr2 220398029 220398069 -30289785 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr2 220398740 220398768 -30289086 + AT_rich Low_complexity Low_complexity 1 28 0 2296 89 0 3 chr2 220398775 220399068 -30288786 + AluSq SINE Alu 3 294 -19 365 58 19 0 chr2 220399068 220399120 -30288734 + (TA)n Simple_repeat Simple_repeat 2 54 0 23 86 0 0 chr2 220400187 220400245 -30287609 + AT_rich Low_complexity Low_complexity 1 58 0 362 294 72 13 chr2 220400366 220400519 -30287335 + MIR SINE MIR 100 261 -1 245 331 39 47 chr2 220400641 220400768 -30287086 + L2 LINE L2 3146 3271 -1 233 191 0 0 chr2 220400843 220400885 -30286969 + (CA)n Simple_repeat Simple_repeat 2 43 0 773 269 0 33 chr2 220401037 220401249 -30286605 + L1M4 LINE L1 14 218 -6324 * 1846 237 78 21 chr2 220401245 220401642 -30286212 + L1M4 LINE L1 547 920 -5622 378 0 0 0 chr2 220401642 220401684 -30286170 + (CA)n Simple_repeat Simple_repeat 1 42 0 180 0 0 0 chr2 220401683 220401703 -30286151 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 1846 237 78 21 chr2 220401684 220401819 -30286035 + L1M4 LINE L1 920 1089 -5453 525 200 21 111 chr2 220401826 220402016 -30285838 + MLT1D LTR MaLR 50 222 -283 833 216 11 0 chr2 220402021 220402197 -30285657 + MLT1D LTR MaLR 328 505 0 4270 241 81 5 chr2 220402209 220403585 -30284269 - L1M4 LINE L1 -1814 4332 2852 3909 117 97 42 chr2 220403587 220404351 -30283503 - Tigger3(Golem) DNA MER2_type -2 3027 2222 1243 200 5 0 chr2 220404337 220404557 -30283297 - Tigger3(Golem) DNA MER2_type -2808 221 1 * 234 311 0 0 chr2 220404591 220404665 -30283189 - MLT1H LTR MaLR -459 90 17 287 259 0 0 chr2 220404685 220404743 -30283111 - MER94 DNA DNA 0 134 77 1237 188 17 8 chr2 220404756 220404995 -30282859 - AluJo SINE Alu -24 288 48 312 183 0 17 chr2 220404998 220405058 -30282796 - MER94 DNA DNA -75 59 1 243 146 0 0 chr2 220406108 220406149 -30281705 + (A)n Simple_repeat Simple_repeat 1 41 0 184 284 94 55 chr2 220406903 220407030 -30280824 + L2 LINE L2 2923 3054 -218 1396 245 0 16 chr2 220407108 220407414 -30280440 - AluJb SINE Alu -7 305 5 197 383 37 12 chr2 220407438 220407519 -30280335 + L2 LINE L2 3134 3216 -56 8131 212 64 92 chr2 220407955 220409309 -30278545 - L1P5 LINE L1 -473 7121 5730 4969 215 20 9 chr2 220409309 220411254 -30276600 - L1PA16 LINE L1 0 6166 4169 2200 127 19 24 chr2 220411261 220411631 -30276223 - THE1C LTR MaLR -7 368 1 8131 212 64 92 chr2 220411631 220412662 -30275192 - L1P5 LINE L1 -1870 5724 4665 1609 50 32 14 chr2 220412662 220412882 -30274972 - AluY SINE Alu 0 311 88 8131 212 64 92 chr2 220412882 220415158 -30272696 - L1P5 LINE L1 -2929 4665 2185 336 154 0 0 chr2 220415226 220415291 -30272563 - L1 LINE L1 -1817 4329 4265 2135 183 48 2 chr2 220415291 220415711 -30272143 - LTR24C LTR ERV1 -196 439 1 2619 175 17 59 chr2 220415720 220416297 -30271557 - MER39B LTR ERV1 -100 553 1 192 77 0 0 chr2 220416321 220416347 -30271507 + (CAG)n Simple_repeat Simple_repeat 1 26 0 355 245 68 36 chr2 220416472 220416664 -30271190 + HAL1b LINE L1 528 725 -623 1732 214 50 15 chr2 220416826 220417138 -30270716 - L1MD3 LINE L1 0 7995 7659 195 42 0 0 chr2 220417138 220417162 -30270692 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1732 214 50 15 chr2 220417162 220417325 -30270529 - L1MD3 LINE L1 -336 7659 7503 36 0 0 0 chr2 220417489 220417525 -30270329 + AT_rich Low_complexity Low_complexity 1 36 0 34 42 0 0 chr2 220418316 220418364 -30269490 + AT_rich Low_complexity Low_complexity 1 48 0 27 49 0 0 chr2 220418986 220419027 -30268827 + AT_rich Low_complexity Low_complexity 1 41 0 231 114 0 0 chr2 220419420 220419455 -30268399 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 378 233 47 0 chr2 220419456 220419542 -30268312 - L1MC4 LINE L1 -1339 6703 6614 23 54 0 0 chr2 220420557 220420594 -30267260 + AT_rich Low_complexity Low_complexity 1 37 0 6143 212 40 26 chr2 220421393 220423967 -30263887 + L1MA6 LINE L1 1 2587 -3741 7790 164 23 67 chr2 220423972 220424512 -30263342 + L1MA6 LINE L1 3898 4460 -2022 2240 113 3 3 chr2 220424512 220424821 -30263033 + AluSc SINE Alu 1 309 0 7790 164 23 67 chr2 220424821 220426383 -30261471 + L1MA6 LINE L1 4460 5851 -631 312 27 0 0 chr2 220426383 220426420 -30261434 + (CA)n Simple_repeat Simple_repeat 2 38 0 7790 164 23 67 chr2 220426420 220427024 -30260830 + L1MA6 LINE L1 5851 6480 -2 411 312 153 45 chr2 220429052 220429360 -30258494 + L3 LINE CR1 1236 1576 -1 21 0 0 0 chr2 220429662 220429683 -30258171 + AT_rich Low_complexity Low_complexity 1 21 0 598 272 137 79 chr2 220432051 220432100 -30255754 - L2 LINE L2 -125 3188 3143 2348 110 11 8 chr2 220432100 220432454 -30255400 - THE1A LTR MaLR 0 355 1 10887 102 15 10 chr2 220432455 220434026 -30253828 - THE1A-int LTR MaLR -1 1579 1 2228 120 8 14 chr2 220434026 220434383 -30253471 - THE1A LTR MaLR 0 355 1 598 272 137 79 chr2 220434383 220434867 -30252987 - L2 LINE L2 -169 3144 2607 859 261 97 42 chr2 220435349 220435751 -30252103 - L2 LINE L2 -2 3311 2888 5446 150 30 33 chr2 220435996 220437965 -30249889 + L1MA5 LINE L1 4321 6300 0 2132 52 0 4 chr2 220438576 220438843 -30249011 - L1PA3 LINE L1 0 6155 5890 5992 28 3 1 chr2 220438843 220439570 -30248284 + L1P LINE L1 4303 5030 -1116 435 178 0 0 chr2 220440104 220440177 -30247677 + U5 snRNA snRNA 1 73 -43 2732 20 0 0 chr2 220440290 220440592 -30247262 - AluY SINE Alu -9 302 1 205 310 7 124 chr2 220440659 220440804 -30247050 - MIR3 SINE MIR -68 140 13 1869 158 14 0 chr2 220440952 220441249 -30246605 - AluJb SINE Alu -11 301 1 25 0 0 0 chr2 220442210 220442235 -30245619 + AT_rich Low_complexity Low_complexity 1 25 0 538 262 37 70 chr2 220442939 220443210 -30244644 - L1ME3A LINE L1 -263 5907 5646 303 85 0 0 chr2 220443281 220443328 -30244526 + (TG)n Simple_repeat Simple_repeat 2 48 0 303 145 66 0 chr2 220443381 220443457 -30244397 + (TATATG)n Simple_repeat Simple_repeat 2 82 0 1709 201 45 21 chr2 220443597 220443931 -30243923 - MLT2D LTR ERVL -71 343 2 871 224 45 8 chr2 220443934 220444198 -30243656 - Charlie1 DNA MER1_type -29 2732 2459 279 161 43 54 chr2 220444216 220444309 -30243545 - L1MEc LINE L1 -2884 3331 3240 246 252 118 15 chr2 220444359 220444494 -30243360 - L1MEc LINE L1 -3091 3124 2976 911 145 14 1 chr2 220444545 220444761 -30243093 - L1ME3A LINE L1 -743 5403 5207 2247 116 27 48 chr2 220444761 220444960 -30242894 - THE1B LTR MaLR 0 364 175 6817 55 12 0 chr2 220444960 220446392 -30241462 - L1PA7 LINE L1 0 6154 4704 2247 116 27 48 chr2 220446392 220446564 -30241290 - THE1B LTR MaLR -189 175 1 13104 194 18 57 chr2 220446564 220448252 -30239602 - L1P LINE L1 -935 5211 3714 2408 111 40 8 chr2 220448252 220448605 -30239249 + THE1B LTR MaLR 1 364 0 13104 194 18 57 chr2 220448605 220450227 -30237627 - L1P LINE L1 -2432 3714 2030 4179 199 15 1 chr2 220450317 220451044 -30236810 - L1PA13 LINE L1 -6049 738 2 4112 224 8 9 chr2 220451049 220452609 -30235245 - L1PA12 LINE L1 -3706 3878 2319 404 324 62 28 chr2 220454066 220454416 -30233438 - L1PA12 LINE L1 -6484 1101 7 482 286 23 98 chr2 220454420 220454477 -30233377 - L1MEc LINE L1 -3817 2398 2338 222 37 0 0 chr2 220454477 220454504 -30233350 + (CTTTG)n Simple_repeat Simple_repeat 3 29 0 482 286 23 98 chr2 220454504 220455023 -30232831 - L1MEc LINE L1 -3877 2338 1909 1917 175 0 0 chr2 220455171 220455480 -30232374 - AluSx SINE Alu -3 309 1 351 285 64 69 chr2 220455815 220456071 -30231783 - L1MEc LINE L1 -4862 1343 1087 1780 97 4 25 chr2 220456071 220456350 -30231504 - L1PB1 LINE L1 -1 6150 5878 351 285 64 69 chr2 220456350 220456700 -30231154 - L1MEc LINE L1 -5118 1087 740 1450 219 24 37 chr2 220456754 220457129 -30230725 - MLT1A2 LTR MaLR -4 370 1 24 0 0 0 chr2 220457710 220457734 -30230120 + AT_rich Low_complexity Low_complexity 1 24 0 186 43 0 0 chr2 220457907 220457930 -30229924 + (TTCTC)n Simple_repeat Simple_repeat 5 27 0 2050 90 17 31 chr2 220457931 220458220 -30229634 - AluSg SINE Alu -25 285 1 203 371 138 0 chr2 220458489 220458605 -30229249 - L2 LINE L2 0 3272 3141 351 0 0 0 chr2 220458733 220458772 -30229082 + (CA)n Simple_repeat Simple_repeat 2 40 0 2295 104 0 0 chr2 220458830 220459139 -30228715 - AluSx SINE Alu 0 312 4 860 296 76 9 chr2 220460699 220461040 -30226814 + LTR50 LTR ERVL 424 787 -8 468 0 0 0 chr2 220461976 220462028 -30225826 + (TA)n Simple_repeat Simple_repeat 2 53 0 1743 130 50 29 chr2 220462028 220462331 -30225523 - AluSg SINE Alu 0 309 1 378 0 0 0 chr2 220462778 220462820 -30225034 + (CA)n Simple_repeat Simple_repeat 2 43 0 338 349 139 0 chr2 220464392 220464564 -30223290 + MLT1J LTR MaLR 1 196 -315 2418 80 0 0 chr2 220464749 220465050 -30222804 + AluY SINE Alu 1 301 -10 1395 292 52 44 chr2 220465639 220466482 -30221372 - L2 LINE L2 -8 3305 2457 183 241 103 0 chr2 220467815 220467873 -30219981 + L2 LINE L2 3141 3204 -109 24 0 0 0 chr2 220467932 220467956 -30219898 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr2 220468334 220468371 -30219483 + AT_rich Low_complexity Low_complexity 1 37 0 37 0 0 0 chr2 220468464 220468501 -30219353 + AT_rich Low_complexity Low_complexity 1 37 0 427 254 73 9 chr2 220469036 220469146 -30218708 - L2 LINE L2 -2 3311 3195 1146 231 20 34 chr2 220470131 220470425 -30217429 - AluJo SINE Alu -12 290 1 490 329 175 11 chr2 220470851 220471125 -30216729 + L2 LINE L2 74 392 -2922 183 129 0 0 chr2 220471267 220471298 -30216556 + (CA)n Simple_repeat Simple_repeat 2 32 0 243 329 0 24 chr2 220471363 220471445 -30216409 + L2 LINE L2 3230 3309 -4 1428 299 185 19 chr2 220471461 220472319 -30215535 + L2 LINE L2 460 1460 -1854 243 240 27 40 chr2 220472536 220472611 -30215243 - MLT1H LTR MaLR -372 177 104 1800 197 14 27 chr2 220472649 220473019 -30214835 + MLT1A1 LTR MaLR 1 365 0 2831 213 50 17 chr2 220473019 220473657 -30214197 + MLT1A1-int LTR MaLR 1 659 -1076 558 222 3 10 chr2 220473821 220473960 -30213894 + MLT1A1-int LTR MaLR 677 1020 -715 1791 248 31 25 chr2 220474039 220474519 -30213335 + MLT1A1-int LTR MaLR 1252 1734 -1 889 156 0 13 chr2 220474520 220474674 -30213180 + MLT1A1 LTR MaLR 1 152 -213 1361 113 0 20 chr2 220474679 220474874 -30212980 + AluSg/x SINE Alu 99 289 -23 341 130 0 0 chr2 220474941 220474995 -30212859 - MLT2A2 LTR ERVL 0 453 400 314 173 0 12 chr2 220475000 220475081 -30212773 + (TA)n Simple_repeat Simple_repeat 1 80 0 249 217 0 29 chr2 220475093 220475162 -30212692 + L1MC4 LINE L1 6613 6679 -1363 2858 83 23 8 chr2 220475162 220475560 -30212294 - MLT2A1 LTR ERVL -40 404 1 811 230 0 6 chr2 220475564 220475725 -30212129 + MLT1A1 LTR MaLR 215 374 0 2013 131 0 0 chr2 220475951 220476242 -30211612 - AluSg SINE Alu -19 291 1 3509 234 41 37 chr2 220476341 220477418 -30210436 - L1MD3 LINE L1 -12 7983 5258 2115 98 24 3 chr2 220478971 220479268 -30208586 - AluSc SINE Alu -6 303 1 186 139 139 69 chr2 220480221 220480293 -30207561 - L3b LINE CR1 -231 1352 1276 366 171 0 0 chr2 220480419 220480489 -30207365 + CT-rich Low_complexity Low_complexity 4 73 0 1721 179 10 13 chr2 220480500 220480813 -30207041 - AluJb SINE Alu 0 312 1 25 65 0 0 chr2 220482205 220482251 -30205603 + AT_rich Low_complexity Low_complexity 1 46 0 27 29 0 0 chr2 220483408 220483442 -30204412 + AT_rich Low_complexity Low_complexity 1 34 0 2429 204 75 100 chr2 220483784 220483941 -30203913 - L1MB7 LINE L1 -23 6397 6238 404 179 26 0 chr2 220483941 220484019 -30203835 - AluSc SINE Alu -14 295 216 2429 204 75 100 chr2 220484019 220484307 -30203547 - L1MB7 LINE L1 -182 6238 5944 1085 60 0 0 chr2 220484307 220484440 -30203414 - L1PA8 LINE L1 -8 6164 6032 2429 204 75 100 chr2 220484440 220485473 -30202381 - L1MB7 LINE L1 -476 5944 4887 * 3391 219 47 26 chr2 220485463 220485752 -30202102 - L1MB7 LINE L1 -2664 3718 3436 1872 118 55 0 chr2 220485752 220486057 -30201797 - AluSq SINE Alu 0 320 1 3391 219 47 26 chr2 220486057 220486238 -30201616 - L1MB7 LINE L1 -2946 3436 3260 2283 106 0 10 chr2 220486238 220486550 -30201304 - AluSx SINE Alu -1 311 3 3391 219 47 26 chr2 220486550 220487645 -30200209 - L1MB7 LINE L1 -3122 3260 2120 3229 190 33 24 chr2 220487645 220488325 -30199529 + MER54A LTR ERVL 16 890 -11 9847 174 49 31 chr2 220488330 220489108 -30198746 - L1M4c LINE L1 -4259 2125 1363 3114 198 24 8 chr2 220489108 220489739 -30198115 - MER73 LTR ERVL 0 644 4 9847 174 49 31 chr2 220489739 220491046 -30196808 - L1M4c LINE L1 -5021 1363 1 5955 252 49 19 chr2 220491030 220491848 -30196006 - L1M4 LINE L1 -1819 5138 4347 * 1492 188 70 52 chr2 220491848 220491989 -30195865 + MLT1B LTR MaLR 1 138 -252 2275 64 30 3 chr2 220491989 220492286 -30195568 - AluY SINE Alu -6 305 1 1492 188 70 52 chr2 220492286 220492527 -30195327 + MLT1B LTR MaLR 138 390 0 5955 252 49 19 chr2 220492527 220493817 -30194037 - L1M4 LINE L1 -2610 4347 2965 830 237 0 6 chr2 220493820 220493997 -30193857 - MER82 DNA MER2_type -471 182 7 1090 241 58 29 chr2 220494080 220494461 -30193393 - L1M4 LINE L1 -4536 2423 2032 320 258 0 0 chr2 220494463 220494552 -30193302 + L1M4 LINE L1 1617 1705 -4837 * 3958 247 88 88 chr2 220494549 220495081 -30192773 - L1M4 LINE L1 -5156 1699 1168 435 151 14 14 chr2 220495081 220495154 -30192700 + Tigger5 DNA MER2_type 2251 2323 0 3958 247 88 88 chr2 220495154 220496142 -30191712 - L1M4 LINE L1 -5687 1168 114 281 279 66 33 chr2 220496358 220496480 -30191374 + L1ME4a LINE L1 5989 6114 -7 23 0 0 0 chr2 220497395 220497418 -30190436 + AT_rich Low_complexity Low_complexity 1 23 0 320 216 0 11 chr2 220497887 220497975 -30189879 + CT-rich Low_complexity Low_complexity 1 87 0 1651 151 3 60 chr2 220497975 220498294 -30189560 - AluSx SINE Alu -11 301 1 224 312 28 37 chr2 220498484 220498593 -30189261 + MIR SINE MIR 57 164 -98 1274 218 13 77 chr2 220499164 220499554 -30188300 + MLT1A1 LTR MaLR 1 365 0 1851 223 14 0 chr2 220499689 220500048 -30187806 - MLT1A1 LTR MaLR 0 365 2 1503 193 22 26 chr2 220500090 220500401 -30187453 - AluJb SINE Alu -1 311 2 24 53 0 0 chr2 220501141 220501179 -30186675 + AT_rich Low_complexity Low_complexity 1 38 0 730 163 30 12 chr2 220501278 220501444 -30186410 - L1MB4 LINE L1 -1 6179 6011 458 215 0 0 chr2 220501444 220501537 -30186317 + L1M3 LINE L1 5600 5692 -488 1013 172 3 144 chr2 220501542 220501753 -30186101 - L1MB4 LINE L1 -564 5607 5455 978 128 43 0 chr2 220501753 220501917 -30185937 - L1MA3 LINE L1 -1 6304 6134 1013 172 3 144 chr2 220501917 220502025 -30185829 - L1MB4 LINE L1 -716 5455 5333 22 56 0 0 chr2 220502058 220502094 -30185760 + AT_rich Low_complexity Low_complexity 1 36 0 2074 195 129 2 chr2 220502094 220502520 -30185334 - MLT2B1 LTR ERVL -40 480 1 372 209 12 139 chr2 220502522 220502694 -30185160 - L1MB4 LINE L1 -812 5334 5185 964 304 80 57 chr2 220502718 220502779 -30185075 - L1M4 LINE L1 -5662 880 822 207 0 0 0 chr2 220502779 220502802 -30185052 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 964 304 80 57 chr2 220502802 220503599 -30184255 - L1M4 LINE L1 -5720 822 2 194 313 36 36 chr2 220504015 220504098 -30183756 - L2 LINE L2 -568 2746 2664 553 291 31 53 chr2 220504457 220504684 -30183170 - MIR SINE MIR -24 238 17 28 48 0 0 chr2 220504933 220504975 -30182879 + AT_rich Low_complexity Low_complexity 1 42 0 393 306 71 46 chr2 220505108 220505389 -30182465 + L1 LINE L1 2678 2965 -3181 935 274 128 15 chr2 220505662 220505990 -30181864 - MLT1F LTR MaLR -8 534 170 314 250 0 22 chr2 220506003 220506095 -30181759 + L1MC4 LINE L1 6614 6703 -1339 242 306 24 0 chr2 220506068 220506153 -30181701 + L1MC4 LINE L1 6617 6703 -1339 * 252 333 23 0 chr2 220506155 220506242 -30181612 + (TATATG)n Simple_repeat Simple_repeat 3 91 0 1772 242 60 37 chr2 220506327 220506699 -30181155 + MLT1E2 LTR MaLR 47 438 -188 243 0 0 0 chr2 220506699 220506726 -30181128 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1772 242 60 37 chr2 220506726 220506919 -30180935 + MLT1E2 LTR MaLR 438 625 -1 301 308 63 28 chr2 220506929 220507072 -30180782 - MLT1F LTR MaLR -392 150 3 376 264 43 128 chr2 220507073 220507448 -30180406 - MLT1F-int LTR MaLR -6 1365 1023 286 274 91 54 chr2 220507638 220507824 -30180030 - MLT1F-int LTR MaLR -487 884 692 434 321 77 7 chr2 220508059 220508432 -30179422 - MLT1F-int LTR MaLR -840 531 14 922 268 98 7 chr2 220508445 220508732 -30179122 - MLT1F LTR MaLR 0 542 230 428 236 18 114 chr2 220508865 220509085 -30178769 - MLT1F LTR MaLR -343 199 1 865 76 93 0 chr2 220509571 220509689 -30178165 + AluSc SINE Alu 1 129 -180 626 137 43 11 chr2 220509692 220510046 -30177808 + (TA)n Simple_repeat Simple_repeat 1 365 0 306 232 11 53 chr2 220510047 220510142 -30177712 + L1MC4 LINE L1 6613 6703 -1339 268 187 13 13 chr2 220510146 220510221 -30177633 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 306 0 0 0 chr2 220510221 220510255 -30177599 + (GA)n Simple_repeat Simple_repeat 2 35 0 1230 107 0 0 chr2 220510257 220510416 -30177438 + AluSg/x SINE Alu 134 292 -18 1253 244 7 28 chr2 220510459 220510750 -30177104 - MLT1A2 LTR MaLR 0 374 90 351 0 0 0 chr2 220512106 220512145 -30175709 + (TG)n Simple_repeat Simple_repeat 1 39 0 23 68 0 0 chr2 220512399 220512443 -30175411 + AT_rich Low_complexity Low_complexity 1 44 0 252 329 0 0 chr2 220514001 220514083 -30173771 + L2 LINE L2 3213 3294 -19 718 294 156 25 chr2 220514184 220514675 -30173179 + L2 LINE L2 2765 3313 0 243 0 0 0 chr2 220516387 220516414 -30171440 + (A)n Simple_repeat Simple_repeat 1 27 0 232 250 17 0 chr2 220516625 220516685 -30171169 + (TTCA)n Simple_repeat Simple_repeat 1 61 0 316 192 48 8 chr2 220517286 220517411 -30170443 + (TA)n Simple_repeat Simple_repeat 1 130 0 1610 212 46 0 chr2 220517679 220518071 -30169783 + L1M4 LINE L1 2567 2976 -3170 1021 215 36 48 chr2 220518075 220518433 -30169421 + L1M4 LINE L1 4282 4635 -1511 2327 151 9 62 chr2 220519839 220520288 -30167566 - Tigger2a DNA MER2_type -4 430 6 3756 62 8 0 chr2 220520502 220520984 -30166870 - L1PA7 LINE L1 -2 6152 5667 1535 266 72 63 chr2 220521314 220521355 -30166499 + MER20B DNA MER1_type 19 58 -725 306 0 0 0 chr2 220521355 220521389 -30166465 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1535 266 72 63 chr2 220521389 220522079 -30165775 + MER20B DNA MER1_type 58 757 -26 2324 88 0 3 chr2 220526058 220526363 -30161491 - AluSg SINE Alu -6 304 1 1322 136 75 0 chr2 220527141 220527354 -30160500 + MER30 DNA MER1_type 2 230 0 181 347 0 0 chr2 220527405 220527454 -30160400 - L2 LINE L2 -71 3201 3153 2243 97 23 14 chr2 220527716 220528066 -30159788 + THE1A LTR MaLR 1 353 -2 11548 88 13 1 chr2 220528068 220529629 -30158225 + THE1A-int LTR MaLR 1 1580 0 1816 136 62 15 chr2 220529629 220529968 -30157886 + THE1A LTR MaLR 1 355 0 307 262 68 73 chr2 220530010 220530216 -30157638 - L2 LINE L2 -5 3308 3104 2004 151 34 25 chr2 220531356 220531714 -30156140 - THE1B LTR MaLR -1 363 3 2545 168 90 0 chr2 220531978 220532447 -30155407 - MLT2B1 LTR ERVL 0 520 10 636 292 72 0 chr2 220532474 220532669 -30155185 + MER63A DNA MER1_type 2 210 0 468 279 88 0 chr2 220532922 220533058 -30154796 + MIR SINE MIR 7 154 -108 2397 239 33 16 chr2 220533064 220533641 -30154213 + MER82 DNA MER2_type 3 589 -64 1250 191 47 75 chr2 220533641 220534378 -30153476 - MER67B LTR ERV1 0 543 3 353 230 14 0 chr2 220534378 220534447 -30153407 + MER82 DNA MER2_type 584 653 0 180 118 294 20 chr2 220534467 220534518 -30153336 + MIR SINE MIR 193 257 -5 21 89 0 0 chr2 220535182 220535238 -30152616 + AT_rich Low_complexity Low_complexity 1 56 0 203 119 24 24 chr2 220535981 220536023 -30151831 + GA-rich Low_complexity Low_complexity 4 45 0 781 191 0 0 chr2 220536809 220536940 -30150914 + FLAM_C SINE Alu 1 131 -2 653 266 74 80 chr2 220536968 220537919 -30149935 - L1ME LINE L1 -4621 1775 779 2196 114 0 0 chr2 220537958 220538256 -30149598 + AluSx SINE Alu 1 298 -14 288 371 61 27 chr2 220538706 220539035 -30148819 - L1ME LINE L1 -6023 373 34 24 32 0 0 chr2 220539559 220539590 -30148264 + AT_rich Low_complexity Low_complexity 1 31 0 239 271 161 8 chr2 220540066 220540184 -30147670 + HAL1b LINE L1 398 533 -815 487 257 207 41 chr2 220540287 220540630 -30147224 + HAL1b LINE L1 748 1147 -201 823 218 99 5 chr2 220540936 220541138 -30146716 - MER58A DNA MER1_type -3 221 1 285 307 88 13 chr2 220541465 220541648 -30146206 - MIR3 SINE MIR -10 198 1 429 138 0 0 chr2 220541704 220541784 -30146070 + (TA)n Simple_repeat Simple_repeat 1 80 0 2095 125 3 0 chr2 220541784 220542088 -30145766 - AluSx SINE Alu -5 307 3 1109 191 5 0 chr2 220542355 220542543 -30145311 - MER5A DNA MER1_type 0 189 1 321 249 35 178 chr2 220542551 220542702 -30145152 + MER5B DNA MER1_type 7 125 -53 1686 178 12 6 chr2 220542702 220543022 -30144832 - L1MA6 LINE L1 -8 6292 5971 321 249 35 178 chr2 220543022 220543067 -30144787 + MER5B DNA MER1_type 125 175 -3 3707 152 65 25 chr2 220544318 220544812 -30143042 - MER72 LTR ERV1 0 722 191 2149 129 3 0 chr2 220544812 220545122 -30142732 + AluSq SINE Alu 1 311 -2 3707 152 65 25 chr2 220545122 220545320 -30142534 - MER72 LTR ERV1 -531 191 2 329 296 113 46 chr2 220545593 220545646 -30142208 - L2 LINE L2 -1453 1861 1813 2303 106 31 14 chr2 220545646 220546004 -30141850 - THE1B LTR MaLR 0 364 1 329 296 113 46 chr2 220546004 220546190 -30141664 - L2 LINE L2 -1501 1813 1606 245 292 146 0 chr2 220549287 220549376 -30138478 - L2 LINE L2 -16 3256 3155 362 298 133 11 chr2 220549495 220549725 -30138129 - MIR SINE MIR -2 260 2 1484 251 130 48 chr2 220549786 220550768 -30137086 - Charlie7 DNA MER1_type -75 2537 1469 2178 121 42 17 chr2 220550768 220551123 -30136731 - THE1B LTR MaLR 0 364 1 1484 251 130 48 chr2 220551123 220551146 -30136708 - Charlie7 DNA MER1_type -1143 1469 1449 532 263 54 5 chr2 220551548 220551734 -30136120 + Charlie7 DNA MER1_type 1524 1718 -894 660 300 41 0 chr2 220551826 220552046 -30135808 + MIR SINE MIR 34 262 0 213 233 0 33 chr2 220552157 220552217 -30135637 + GA-rich Low_complexity Low_complexity 3 60 0 27 29 0 0 chr2 220553379 220553413 -30134441 + AT_rich Low_complexity Low_complexity 1 34 0 265 311 18 110 chr2 220554415 220554579 -30133275 + MIR SINE MIR 8 156 -106 214 143 41 0 chr2 220555703 220555752 -30132102 + (TA)n Simple_repeat Simple_repeat 1 51 0 414 279 63 84 chr2 220556707 220557021 -30130833 - L1MC4a LINE L1 -279 5885 5628 204 231 0 0 chr2 220558256 220558308 -30129546 + (TATG)n Simple_repeat Simple_repeat 4 55 0 891 271 97 51 chr2 220558372 220559094 -30128760 - L2 LINE L2 -2 3311 2545 2709 167 26 15 chr2 220559303 220559847 -30128007 - L1MA10 LINE L1 -8 6326 5777 582 231 9 6 chr2 220559854 220560017 -30127837 + L1ME LINE L1 5687 5850 -271 286 119 0 0 chr2 220560488 220560530 -30127324 - MSTA LTR MaLR 0 428 387 1217 25 82 0 chr2 220560530 220560688 -30127166 - L1P LINE L1 -5085 1061 891 3436 22 0 17 chr2 220560688 220561144 -30126710 + L1PA3 LINE L1 5747 6195 0 1864 138 130 19 chr2 220561144 220561505 -30126349 - MSTA LTR MaLR -27 401 1 418 261 103 12 chr2 220561521 220561686 -30126168 + LTR16C LTR ERVL 312 491 0 445 221 215 7 chr2 220562878 220563027 -30124827 - L2 LINE L2 -581 2733 2554 207 195 0 0 chr2 220563046 220563087 -30124767 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 2604 209 72 42 chr2 220563088 220563874 -30123980 - L1MC4 LINE L1 -3 8039 7230 7192 191 124 28 chr2 220563874 220565473 -30122381 - MER52A LTR ERV1 0 1755 3 2553 250 92 25 chr2 220565474 220566505 -30121349 - L1MC4 LINE L1 -654 7234 6113 559 328 78 71 chr2 220566505 220567360 -30120494 - L1M4 LINE L1 -2999 3147 2283 450 0 0 0 chr2 220567360 220567410 -30120444 + (TG)n Simple_repeat Simple_repeat 2 51 0 559 328 78 71 chr2 220567410 220567546 -30120308 - L1M4 LINE L1 -3863 2283 2149 7154 28 6 0 chr2 220568044 220568890 -30118964 - L1PA4 LINE L1 -2 6153 5303 1766 28 0 0 chr2 220568889 220569103 -30118751 + L1PA4 LINE L1 5085 5298 -848 * 2845 151 16 18 chr2 220569269 220569780 -30118074 - LTR8A LTR ERV1 -55 672 163 2608 78 31 18 chr2 220569791 220570174 -30117680 - L1PA13 LINE L1 -3 6160 5773 513 314 40 100 chr2 220570174 220570715 -30117139 - HAL1b LINE L1 -930 418 53 230 163 23 23 chr2 220571371 220571457 -30116397 + (TA)n Simple_repeat Simple_repeat 2 87 0 238 143 20 0 chr2 220571463 220571512 -30116342 + LTR66 LTR ERVL 389 438 -172 1174 138 0 43 chr2 220571571 220571759 -30116095 - AluSg/x SINE Alu -2 310 131 501 92 13 0 chr2 220571814 220571890 -30115964 - MADE1 DNA Mariner 0 80 4 317 43 21 0 chr2 220571918 220571965 -30115889 + (CAA)n Simple_repeat Simple_repeat 2 49 0 260 242 30 20 chr2 220573314 220573413 -30114441 + (TA)n Simple_repeat Simple_repeat 1 100 0 6355 178 18 5 chr2 220573957 220575080 -30112774 + L1MA3 LINE L1 10 1147 -6418 7359 172 38 15 chr2 220575097 220578345 -30109509 + L1MA3 LINE L1 4299 7724 0 237 178 0 0 chr2 220578407 220578452 -30109402 + CT-rich Low_complexity Low_complexity 1 45 0 1264 156 15 0 chr2 220578454 220578653 -30109201 - AluJo SINE Alu -33 279 78 230 314 57 50 chr2 220579737 220579896 -30107958 - MER5A DNA MER1_type -28 161 2 337 286 91 11 chr2 220582529 220582704 -30105150 + L3b LINE CR1 1125 1313 -270 330 281 102 31 chr2 220583207 220583335 -30104519 - MIR SINE MIR -125 137 1 2035 97 0 55 chr2 220583495 220583805 -30104049 - AluSq SINE Alu -20 293 1 312 27 0 0 chr2 220585776 220585813 -30102041 + (CA)n Simple_repeat Simple_repeat 2 38 0 186 43 0 0 chr2 220585814 220585837 -30102017 + (GA)n Simple_repeat Simple_repeat 2 24 0 14109 127 41 17 chr2 220585847 220588208 -30099646 - Tigger1 DNA MER2_type -1 2417 1 863 100 0 0 chr2 220588562 220588672 -30099182 + AluSg/x SINE Alu 173 282 -30 663 78 0 0 chr2 220588682 220588772 -30099082 + (TA)n Simple_repeat Simple_repeat 1 90 0 387 345 94 15 chr2 220589822 220590225 -30097629 + L1M4 LINE L1 4178 4612 -1534 22 56 0 0 chr2 220590336 220590372 -30097482 + AT_rich Low_complexity Low_complexity 1 36 0 1031 260 171 84 chr2 220590385 220590856 -30096998 + L1MEc LINE L1 112 663 -5733 2015 172 61 15 chr2 220590856 220591252 -30096602 - MLT2D LTR ERVL 0 414 1 1031 260 171 84 chr2 220591252 220591472 -30096382 + L1MEc LINE L1 663 863 -5533 357 24 0 0 chr2 220591477 220591519 -30096335 + (CA)n Simple_repeat Simple_repeat 1 42 0 1030 274 162 74 chr2 220591554 220591633 -30096221 + L2 LINE L2 2282 2353 -961 2260 113 3 0 chr2 220591633 220591944 -30095910 + AluSx SINE Alu 1 312 0 1030 274 162 74 chr2 220591944 220592386 -30095468 + L2 LINE L2 2353 2866 -448 859 194 86 57 chr2 220592386 220592701 -30095153 - MER33 DNA MER1_type 0 324 1 1030 274 162 74 chr2 220592701 220592783 -30095071 + L2 LINE L2 2866 2939 -375 1401 156 52 99 chr2 220592795 220593160 -30094694 - MLT1A1 LTR MaLR -17 348 1 651 275 203 19 chr2 220593162 220593482 -30094372 + L2 LINE L2 2933 3311 -2 21 71 0 0 chr2 220593766 220593808 -30094046 + AT_rich Low_complexity Low_complexity 1 42 0 30 83 0 0 chr2 220594418 220594490 -30093364 + AT_rich Low_complexity Low_complexity 1 72 0 575 343 9 19 chr2 220594507 220594720 -30093134 - MIR SINE MIR -42 220 10 262 242 16 0 chr2 220594859 220594921 -30092933 + L2 LINE L2 3250 3312 -1 515 319 123 28 chr2 220599481 220599954 -30087900 - L1M4 LINE L1 -747 5399 4882 321 239 105 82 chr2 220600121 220600377 -30087477 - L1M4 LINE L1 -2225 3921 3663 21 36 0 0 chr2 220602273 220602301 -30085553 + AT_rich Low_complexity Low_complexity 1 28 0 2195 274 47 25 chr2 220602524 220602721 -30085133 + L1ME3A LINE L1 4282 4473 -1689 2328 91 3 3 chr2 220602721 220603030 -30084824 - AluSc SINE Alu 0 309 1 2195 274 47 25 chr2 220603030 220603428 -30084426 + L1ME3A LINE L1 4473 4861 -1301 1415 213 33 25 chr2 220603428 220603790 -30084064 + MLT1A1 LTR MaLR 1 365 0 2195 274 47 25 chr2 220603790 220604404 -30083450 + L1ME3A LINE L1 4861 5515 -647 438 249 33 39 chr2 220604410 220604591 -30083263 + L1ME3A LINE L1 5691 5870 -292 251 304 124 10 chr2 220604604 220604805 -30083049 - L1M4 LINE L1 -863 5283 5060 412 254 177 26 chr2 220604847 220605079 -30082775 + L1ME3A LINE L1 5896 6162 -8 465 34 0 0 chr2 220606009 220606068 -30081786 + (TG)n Simple_repeat Simple_repeat 2 60 0 22 0 0 0 chr2 220606652 220606674 -30081180 + AT_rich Low_complexity Low_complexity 1 22 0 1650 155 78 11 chr2 220607766 220608050 -30079804 + AluJb SINE Alu 1 303 -9 295 304 61 109 chr2 220609426 220609656 -30078198 + MIR SINE MIR 20 238 -24 2478 53 0 37 chr2 220609812 220610135 -30077719 + AluY SINE Alu 1 311 0 535 201 165 30 chr2 220610337 220610501 -30077353 - MER5A DNA MER1_type -3 186 1 212 222 61 0 chr2 220610541 220610640 -30077214 + (TA)n Simple_repeat Simple_repeat 2 106 0 1811 187 50 50 chr2 220610774 220611239 -30076615 + MLT1C LTR MaLR 1 465 -2 551 234 62 23 chr2 220612108 220612236 -30075618 - MER5B DNA MER1_type 0 178 46 721 126 31 8 chr2 220613184 220613311 -30074543 - L1PA16 LINE L1 -10 6156 6027 323 293 86 21 chr2 220614299 220614439 -30073415 - L2 LINE L2 -19 3294 3146 1020 160 0 37 chr2 220614716 220614904 -30072950 + AluSg/x SINE Alu 132 312 0 1837 142 77 14 chr2 220615869 220616222 -30071632 + THE1C LTR MaLR 1 375 0 283 301 0 14 chr2 220616915 220616988 -30070866 - L2 LINE L2 0 3313 3242 22 0 0 0 chr2 220617426 220617448 -30070406 + AT_rich Low_complexity Low_complexity 1 22 0 378 327 52 37 chr2 220618106 220618510 -30069344 + L1ME LINE L1 3390 3799 -2347 218 263 105 0 chr2 220618624 220618700 -30069154 + L2 LINE L2 3211 3294 -19 316 356 15 0 chr2 220618791 220618926 -30068928 + L1ME LINE L1 5548 5684 -437 315 364 85 44 chr2 220618960 220619419 -30068435 + L2 LINE L2 2103 2580 -734 197 182 18 0 chr2 220619684 220619739 -30068115 + GA-rich Low_complexity Low_complexity 2 57 0 23 54 0 0 chr2 220619767 220619804 -30068050 + AT_rich Low_complexity Low_complexity 1 37 0 265 371 95 55 chr2 220620143 220620396 -30067458 + L2 LINE L2 3000 3262 -10 813 263 21 53 chr2 220620690 220620933 -30066921 - MIR SINE MIR 0 262 28 266 266 9 53 chr2 220620980 220621093 -30066761 + MIR SINE MIR 155 262 0 500 317 110 8 chr2 220621479 220621984 -30065870 - L1MC4a LINE L1 -721 5453 5318 219 36 0 0 chr2 220621990 220622018 -30065836 + (TA)n Simple_repeat Simple_repeat 2 29 0 1020 251 163 6 chr2 220622163 220622754 -30065100 + LTR50 LTR ERVL 3 770 -25 275 230 11 0 chr2 220622978 220623065 -30064789 + (TG)n Simple_repeat Simple_repeat 1 88 0 448 244 157 0 chr2 220623211 220623326 -30064528 - MER58B DNA MER1_type 0 341 209 319 280 0 0 chr2 220623472 220623547 -30064307 + MER5A DNA MER1_type 10 84 -105 770 265 0 0 chr2 220623549 220623715 -30064139 - MER63A DNA MER1_type 0 210 45 296 209 238 57 chr2 220623740 220623845 -30064009 + MER5A DNA MER1_type 66 189 0 186 346 87 10 chr2 220623859 220623963 -30063891 - MER5A DNA MER1_type -6 183 72 * 248 286 24 119 chr2 220623874 220624042 -30063812 + MER5A DNA MER1_type 38 189 0 728 219 69 127 chr2 220624094 220624487 -30063367 + MLT1B-int LTR MaLR 973 1342 -29 648 167 49 0 chr2 220625216 220625360 -30062494 + L1MB1 LINE L1 6017 6167 -1 195 42 0 0 chr2 220627157 220627181 -30060673 + (TG)n Simple_repeat Simple_repeat 1 24 0 190 303 41 74 chr2 220627181 220627303 -30060551 - L2 LINE L2 -3 3310 3193 925 262 80 0 chr2 220627319 220627556 -30060298 - MIR SINE MIR -2 260 5 2232 167 19 3 chr2 220627795 220628173 -30059681 + MLT1B LTR MaLR 7 390 0 193 302 151 22 chr2 220628799 220628938 -30058916 + MIR SINE MIR 68 224 -38 573 299 18 0 chr2 220629284 220629448 -30058406 + L1ME3 LINE L1 5987 6153 -9 2009 118 79 25 chr2 220629449 220629805 -30058049 + THE1C LTR MaLR 1 375 0 3111 117 12 18 chr2 220629880 220630375 -30057479 - L1PA15 LINE L1 -6 6159 5668 446 303 73 91 chr2 220630739 220631135 -30056719 - MLT1I LTR MaLR -4 405 17 576 287 124 15 chr2 220631172 220631374 -30056480 + MIR SINE MIR 28 251 -11 192 303 112 21 chr2 220631665 220631853 -30056001 - L2 LINE L2 -5 3308 3104 1429 248 102 64 chr2 220632146 220632845 -30055009 - MER50 LTR ERV1 0 734 10 444 185 241 0 chr2 220632851 220632959 -30054895 - MLT1J2 LTR MaLR -315 135 2 268 329 119 0 chr2 220633013 220633156 -30054698 - L2 LINE L2 -277 3036 2877 354 129 0 0 chr2 220633422 220633484 -30054370 + (GA)n Simple_repeat Simple_repeat 1 62 0 483 297 97 22 chr2 220633706 220634110 -30053744 - L2 LINE L2 -438 2876 2443 720 305 137 21 chr2 220634240 220634706 -30053148 - LTR33 LTR ERVL 0 521 2 213 341 22 0 chr2 220634725 220634816 -30053038 - L2 LINE L2 -1012 2302 2210 770 289 25 21 chr2 220634827 220635062 -30052792 - MIR SINE MIR -2 260 25 488 310 23 0 chr2 220636281 220636410 -30051444 + L2 LINE L2 2848 2979 -334 526 297 50 71 chr2 220636469 220636849 -30051005 + L2 LINE L2 2942 3313 0 23 0 0 0 chr2 220637194 220637217 -30050637 + AT_rich Low_complexity Low_complexity 1 23 0 411 38 0 0 chr2 220637935 220637988 -30049866 + (CA)n Simple_repeat Simple_repeat 1 53 0 243 315 136 40 chr2 220638276 220638393 -30049461 + L3b LINE CR1 1296 1400 -183 1587 174 121 14 chr2 220638393 220638749 -30049105 + MSTD LTR MaLR 3 396 0 243 315 136 40 chr2 220638749 220638882 -30048972 + L3b LINE CR1 1400 1570 -13 8809 70 9 1 chr2 220639637 220641577 -30046277 - L1PA6 LINE L1 -2 6152 4196 18291 109 25 20 chr2 220641577 220644434 -30043420 - L1PA6 LINE L1 -3266 2880 11 23 54 0 0 chr2 220644563 220644600 -30043254 + AT_rich Low_complexity Low_complexity 1 37 0 769 352 51 42 chr2 220645061 220645094 -30042760 + L1M3a LINE L1 11 42 -5913 2125 130 0 3 chr2 220645094 220645393 -30042461 + AluSc SINE Alu 3 300 -9 769 352 51 42 chr2 220645393 220646041 -30041813 + L1M3a LINE L1 42 698 -5257 1927 274 30 5 chr2 220646256 220646850 -30041004 + L1 LINE L1 345 953 -5081 6293 162 28 13 chr2 220646866 220647895 -30039959 + L1 LINE L1 4927 5978 -1587 2384 117 22 3 chr2 220647895 220648263 -30039591 - THE1C LTR MaLR 0 375 1 6293 162 28 13 chr2 220648263 220648461 -30039393 + L1 LINE L1 5978 6172 -1393 799 162 39 0 chr2 220648461 220648615 -30039239 + L1MA6 LINE L1 6141 6300 0 236 240 27 13 chr2 220649277 220649352 -30038502 - HAL1 LINE L1 -814 1693 1618 401 268 91 57 chr2 220649517 220649868 -30037986 - L1MEd LINE L1 -4862 1343 981 374 348 125 20 chr2 220650172 220650517 -30037337 + L2 LINE L2 2057 2437 -877 256 299 321 0 chr2 220650968 220651105 -30036749 + MIR SINE MIR 53 233 -29 183 156 0 0 chr2 220651112 220651144 -30036710 + (CTA)n Simple_repeat Simple_repeat 1 32 0 1564 171 65 15 chr2 220651149 220651488 -30036366 + MER46B DNA MER2_type 6 236 0 22 35 0 0 chr2 220652385 220652414 -30035440 + AT_rich Low_complexity Low_complexity 1 29 0 329 316 161 44 chr2 220653003 220653389 -30034465 - L2 LINE L2 -29 3284 2854 23 33 0 0 chr2 220653666 220653696 -30034158 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 220653748 220653778 -30034076 + AT_rich Low_complexity Low_complexity 1 30 0 2789 191 80 30 chr2 220655189 220655483 -30032371 - MER39 LTR ERV1 -1 706 428 645 14 0 0 chr2 220655483 220655557 -30032297 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 2789 191 80 30 chr2 220655557 220655934 -30031920 - MER39 LTR ERV1 -279 428 1 263 233 198 35 chr2 220658120 220658236 -30029618 + MIR SINE MIR 26 160 -102 2287 252 42 44 chr2 220658248 220658995 -30028859 - L1MEd LINE L1 -5608 788 44 201 419 37 7 chr2 220659130 220659266 -30028588 + MIR3 SINE MIR 42 181 -27 1693 222 138 31 chr2 220659461 220659947 -30027907 - MER101B LTR ERV1 -32 538 1 1201 186 22 13 chr2 220660661 220660887 -30026967 + AluJo SINE Alu 75 302 -10 3674 139 53 9 chr2 220660976 220661621 -30026233 + L1MC1 LINE L1 5661 6333 0 329 247 24 24 chr2 220661789 220661874 -30025980 + MER3 DNA MER1_type 1 85 -124 * 564 207 41 0 chr2 220661842 220661963 -30025891 - MER3 DNA MER1_type -6 203 78 2264 87 3 3 chr2 220662318 220662618 -30025236 + AluSp SINE Alu 14 313 0 761 253 41 21 chr2 220662659 220662853 -30025001 - MER20 DNA MER1_type -15 204 7 1936 138 34 3 chr2 220662879 220663177 -30024677 + AluSx SINE Alu 1 307 -5 417 353 65 7 chr2 220663299 220663574 -30024280 - L2 LINE L2 -828 2486 2196 501 256 237 39 chr2 220663714 220664077 -30023777 + L2 LINE L2 2878 3312 -1 1324 145 8 47 chr2 220664983 220665218 -30022636 + MSTB1 LTR MaLR 7 232 -200 881 112 28 14 chr2 220665232 220665375 -30022479 + MSTB1 LTR MaLR 204 348 -84 1845 185 32 49 chr2 220665379 220665790 -30022064 - MSTB1 LTR MaLR -28 404 1 445 308 63 0 chr2 220665793 220665952 -30021902 + MIR SINE MIR 50 218 -44 223 273 25 8 chr2 220666828 220666949 -30020905 + (TA)n Simple_repeat Simple_repeat 2 124 0 449 314 14 21 chr2 220667113 220667253 -30020601 + MIR SINE MIR 3 141 -121 788 305 32 76 chr2 220667492 220668059 -30019795 - MER34 LTR ERV1 0 542 1 347 287 128 62 chr2 220668750 220669140 -30018714 - L1MEd LINE L1 -2774 3355 2940 522 181 21 65 chr2 220669163 220669350 -30018504 + MER4E LTR ERV1 1 284 -615 * 1619 223 11 11 chr2 220669346 220669696 -30018158 + MER4D LTR ERV1 547 896 -7 311 246 112 52 chr2 220669763 220669897 -30017957 - L1MEd LINE L1 -3279 2850 2709 189 107 0 0 chr2 220670590 220670618 -30017236 + (TTAGGG)n Simple_repeat Simple_repeat 5 32 0 2116 123 0 0 chr2 220670684 220670984 -30016870 + AluSg SINE Alu 3 302 -8 509 326 42 37 chr2 220671143 220671657 -30016197 - L1MEd LINE L1 -898 1592 978 532 239 44 112 chr2 220672589 220672840 -30015014 + MIR SINE MIR 29 262 0 294 278 65 46 chr2 220673169 220673277 -30014577 - L2 LINE L2 0 3313 3204 1439 212 40 0 chr2 220673373 220673647 -30014207 + AluJo SINE Alu 3 287 -25 234 259 98 54 chr2 220673963 220674075 -30013779 - L2 LINE L2 0 3313 3197 34 24 0 0 chr2 220674591 220674632 -30013222 + AT_rich Low_complexity Low_complexity 1 41 0 244 301 88 88 chr2 220675346 220675459 -30012395 - L2 LINE L2 0 3272 3160 228 259 19 19 chr2 220676042 220676096 -30011758 - L2 LINE L2 -10 3262 3209 2316 90 0 7 chr2 220676214 220676513 -30011341 + AluY SINE Alu 1 297 -14 230 274 0 0 chr2 220676643 220676694 -30011160 + MIR SINE MIR 203 253 -9 262 312 183 0 chr2 220677696 220677789 -30010065 + L2 LINE L2 3153 3262 -10 23 54 0 0 chr2 220678380 220678417 -30009437 + AT_rich Low_complexity Low_complexity 1 37 0 221 182 0 23 chr2 220678516 220678560 -30009294 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 234 184 0 0 chr2 220678560 220678609 -30009245 + LTR66 LTR ERVL 394 442 -168 195 42 0 0 chr2 220678877 220678901 -30008953 + (CATTA)n Simple_repeat Simple_repeat 2 25 0 7818 64 6 4 chr2 220682024 220683029 -30004825 - LTR13 LTR ERVK 0 1007 1 294 373 27 13 chr2 220684140 220684290 -30003564 + MIR SINE MIR 2 153 -109 1503 251 69 36 chr2 220684297 220684819 -30003035 + L1MEc LINE L1 36 574 -5822 888 179 41 101 chr2 220684830 220685004 -30002850 + MER58A DNA MER1_type 5 165 -2255 718 198 0 0 chr2 220685004 220685130 -30002724 - FLAM_A SINE Alu -5 128 3 888 179 41 101 chr2 220685130 220685173 -30002681 + MER58A DNA MER1_type 165 209 -15 572 288 63 11 chr2 220685287 220685478 -30002376 - MIR SINE MIR -60 202 2 188 246 51 93 chr2 220685647 220685765 -30002089 + L3 LINE CR1 1210 1322 -255 270 279 38 25 chr2 220685813 220685892 -30001962 - MIR SINE MIR -73 189 110 1193 219 19 64 chr2 220685993 220686304 -30001550 + AluJo SINE Alu 1 297 -5 449 304 61 12 chr2 220687240 220687487 -30000367 - MARNA DNA Mariner -23 563 305 272 299 13 0 chr2 220687569 220687646 -30000208 + MIR3 SINE MIR 85 162 -46 29 28 0 0 chr2 220687843 220687879 -29999975 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr2 220688002 220688023 -29999831 + AT_rich Low_complexity Low_complexity 1 21 0 340 267 23 0 chr2 220689435 220689521 -29998333 - L2 LINE L2 -1 3271 3184 4381 99 2 0 chr2 220690510 220691114 -29996740 - L1PA10 LINE L1 -226 5942 5338 1640 92 0 4 chr2 220691114 220691339 -29996515 + L1PA10 LINE L1 5933 6159 -9 37 0 0 0 chr2 220691342 220691379 -29996475 + AT_rich Low_complexity Low_complexity 1 37 0 323 284 99 5 chr2 220692610 220692821 -29995033 - L1M4 LINE L1 -3645 2501 2271 307 113 23 0 chr2 220692958 220693016 -29994838 - MLT2D LTR ERVL 0 414 366 261 163 0 0 chr2 220693016 220693065 -29994789 + (TG)n Simple_repeat Simple_repeat 2 50 0 245 133 0 0 chr2 220693065 220693110 -29994744 + LTR66 LTR ERVL 394 438 -172 1847 172 11 79 chr2 220693115 220693133 -29994721 - MLT2D LTR ERVL -40 480 462 231 36 0 0 chr2 220693133 220693161 -29994693 + (GA)n Simple_repeat Simple_repeat 2 29 0 1847 172 11 79 chr2 220693161 220693552 -29994302 - MLT2D LTR ERVL -58 462 1 792 314 43 73 chr2 220693614 220694053 -29993801 - L2 LINE L2 -36 3277 2852 333 0 0 0 chr2 220694965 220695002 -29992852 + (T)n Simple_repeat Simple_repeat 1 37 0 236 299 11 0 chr2 220695499 220695586 -29992268 + L1ME LINE L1 5731 5818 -303 753 280 120 39 chr2 220695723 220696205 -29991649 + LTR33 LTR ERVL 1 521 0 407 287 66 8 chr2 220697335 220697457 -29990397 + MIR SINE MIR 1 129 -133 2059 143 3 7 chr2 220697475 220697782 -29990072 - AluSx SINE Alu -1 311 6 301 252 78 19 chr2 220697787 220697890 -29989964 + MIR SINE MIR 98 206 -56 215 122 0 24 chr2 220697976 220698017 -29989837 + (CA)n Simple_repeat Simple_repeat 1 40 0 334 307 133 12 chr2 220698020 220698186 -29989668 - L2 LINE L2 -177 3136 2951 23 0 0 0 chr2 220699534 220699557 -29988297 + AT_rich Low_complexity Low_complexity 1 23 0 366 276 16 31 chr2 220699667 220699794 -29988060 + (CATATA)n Simple_repeat Simple_repeat 2 126 0 41 0 0 0 chr2 220699796 220699837 -29988017 + AT_rich Low_complexity Low_complexity 1 41 0 393 259 116 21 chr2 220701371 220701560 -29986294 - L1MA8 LINE L1 -25 6266 6060 7432 31 6 0 chr2 220701593 220703024 -29984830 - L1PA3 LINE L1 -3 6152 4723 8398 29 0 4 chr2 220703024 220704029 -29983825 + L1P LINE L1 3443 4443 -1703 615 281 109 9 chr2 220704073 220704294 -29983560 - MLT1J1 LTR MaLR -1 445 203 510 187 0 0 chr2 220704692 220704842 -29983012 + (TA)n Simple_repeat Simple_repeat 2 151 0 204 385 90 0 chr2 220706711 220706833 -29981021 + L2 LINE L2 2423 2555 -759 21 0 0 0 chr2 220707277 220707298 -29980556 + AT_rich Low_complexity Low_complexity 1 21 0 311 256 34 77 chr2 220707365 220707482 -29980372 - L1MC4 LINE L1 -1317 6725 6614 234 0 0 0 chr2 220707482 220707508 -29980346 + (TA)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr2 220709297 220709318 -29978536 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 220710569 220710599 -29977255 + AT_rich Low_complexity Low_complexity 1 30 0 218 105 26 0 chr2 220711632 220711670 -29976184 + (TA)n Simple_repeat Simple_repeat 1 39 0 221 229 62 0 chr2 220712468 220712516 -29975338 + L2 LINE L2 3263 3313 0 283 246 14 0 chr2 220713076 220713145 -29974709 - MLT1J LTR MaLR -330 181 112 343 274 60 0 chr2 220713523 220713607 -29974247 - MER5C DNA MER1_type -220 104 16 28 0 0 0 chr2 220713738 220713766 -29974088 + AT_rich Low_complexity Low_complexity 1 28 0 350 311 0 0 chr2 220714732 220714838 -29973016 + MIR SINE MIR 156 261 -1 481 299 39 70 chr2 220715287 220715571 -29972283 + L2 LINE L2 3037 3311 -2 2135 125 0 13 chr2 220716247 220716559 -29971295 - AluSx SINE Alu -4 308 1 183 247 68 41 chr2 220717825 220717898 -29969956 - MIR SINE MIR -8 254 180 251 272 97 9 chr2 220719859 220719973 -29967881 - Charlie2 DNA MER1_type 0 2862 2739 1309 191 90 26 chr2 220720080 220720425 -29967429 + MLT1A2 LTR MaLR 8 374 0 646 171 132 0 chr2 220720430 220720582 -29967272 - Charlie2a DNA MER1_type -1202 1660 1489 295 273 23 11 chr2 220720720 220720808 -29967046 - Charlie2b DNA MER1_type -2138 644 556 375 296 84 47 chr2 220720861 220720926 -29966928 - Charlie2b DNA MER1_type -2637 225 164 2014 154 0 3 chr2 220720926 220721238 -29966616 + AluSx SINE Alu 1 311 -1 375 296 84 47 chr2 220721238 220721385 -29966469 - Charlie2b DNA MER1_type -2698 164 5 184 309 0 18 chr2 220721401 220721456 -29966398 - MER5A DNA MER1_type -48 141 88 1005 259 61 64 chr2 220722348 220722804 -29965050 - LTR16A1 LTR ERVL 0 457 3 267 31 0 0 chr2 220722891 220722923 -29964931 + (TG)n Simple_repeat Simple_repeat 1 32 0 * 324 0 0 0 chr2 220722922 220722958 -29964896 + (GA)n Simple_repeat Simple_repeat 1 36 0 345 284 172 0 chr2 220723040 220723209 -29964645 + MIR SINE MIR 65 262 0 194 326 63 40 chr2 220724067 220724242 -29963612 - MIR SINE MIR -65 197 19 564 363 93 38 chr2 220724367 220724764 -29963090 - L2 LINE L2 -2 3270 2852 310 21 43 0 chr2 220724784 220724831 -29963023 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 886 310 78 52 chr2 220724857 220725474 -29962380 - L2 LINE L2 -575 2739 2107 26 30 0 0 chr2 220727351 220727384 -29960470 + AT_rich Low_complexity Low_complexity 1 33 0 8142 157 15 11 chr2 220727594 220730049 -29957805 - L1PB2 LINE L1 -2 6149 3685 574 197 0 8 chr2 220730063 220730180 -29957674 + AluSg/x SINE Alu 178 293 -19 24 32 0 0 chr2 220730788 220730819 -29957035 + AT_rich Low_complexity Low_complexity 1 31 0 1822 183 3 3 chr2 220731305 220731641 -29956213 - AluJb SINE Alu 0 336 1 5734 98 28 45 chr2 220732794 220734442 -29953412 + L1PBa LINE L1 1 1862 -5001 2090 121 24 0 chr2 220734442 220734739 -29953115 + AluSx SINE Alu 1 304 -8 5734 98 28 45 chr2 220734739 220734853 -29953001 + L1PBa LINE L1 1862 1976 -4887 5247 144 17 20 chr2 220735217 220735409 -29952445 - L1MA4 LINE L1 -5 6295 6104 1748 114 63 11 chr2 220735409 220735680 -29952174 + AluSc SINE Alu 1 285 -24 5247 144 17 20 chr2 220735680 220736406 -29951448 - L1MA4 LINE L1 -196 6104 5379 2063 206 35 62 chr2 220737095 220737662 -29950192 + MLT2B3 LTR ERVL 3 554 0 968 145 17 0 chr2 220737798 220737970 -29949884 + HERVL-B3 LTR ERVL 25 199 -5455 867 226 66 74 chr2 220738051 220738135 -29949719 + MIR SINE MIR 6 89 -173 931 45 76 23 chr2 220738135 220738267 -29949587 + MER85 DNA T2_type 1 139 0 867 226 66 74 chr2 220738267 220738425 -29949429 + MIR SINE MIR 89 246 -16 938 134 85 40 chr2 220739730 220739931 -29947923 + Tigger2 DNA MER2_type 1 210 -2508 495 245 122 7 chr2 220739930 220740069 -29947785 + Tigger2 DNA MER2_type 2554 2708 -10 * 225 154 0 0 chr2 220740314 220740353 -29947501 + (CA)n Simple_repeat Simple_repeat 2 40 0 259 308 39 0 chr2 220740705 220740783 -29947071 + MER5B DNA MER1_type 16 96 -82 183 336 68 48 chr2 220740715 220740861 -29946993 - MER5A DNA MER1_type -25 164 16 * 716 292 158 37 chr2 220741268 220742025 -29945829 + L2 LINE L2 2376 3214 -99 308 265 0 12 chr2 220742228 220742311 -29945543 + MLT1K LTR MaLR 505 586 -2 580 192 186 26 chr2 220743015 220743171 -29944683 - MER20 DNA MER1_type -6 213 33 198 388 20 20 chr2 220743519 220743666 -29944188 + L2 LINE L2 2827 2973 -299 1783 124 43 0 chr2 220743674 220743932 -29943922 - AluSx SINE Alu -10 302 34 635 168 76 8 chr2 220744140 220744271 -29943583 - MER69 DNA AcHobo -4 2522 2383 271 262 0 0 chr2 220744401 220744462 -29943392 - MER69 DNA AcHobo -2464 62 2 187 375 0 0 chr2 220744471 220744535 -29943319 + L2 LINE L2 3196 3259 -13 1871 184 150 43 chr2 220744557 220745091 -29942763 + MER92B LTR ERV1 46 636 0 303 28 0 0 chr2 220745802 220745838 -29942016 + (ATG)n Simple_repeat Simple_repeat 3 38 0 2000 101 4 4 chr2 220745838 220746115 -29941739 - AluSc SINE Alu -32 277 1 21 100 0 0 chr2 220746427 220746497 -29941357 + AT_rich Low_complexity Low_complexity 1 70 0 1333 204 102 13 chr2 220747377 220747759 -29940095 - Charlie1 DNA MER1_type 0 2761 2346 264 261 29 0 chr2 220747760 220747829 -29940025 - Charlie1 DNA MER1_type -2690 71 1 283 226 0 60 chr2 220749082 220749166 -29938688 - L2 LINE L2 -12 3301 3223 26 74 0 0 chr2 220751435 220751489 -29936365 + AT_rich Low_complexity Low_complexity 1 54 0 2327 98 0 0 chr2 220751603 220751908 -29935946 - AluSq SINE Alu -4 309 5 498 285 53 7 chr2 220752273 220752424 -29935430 + MER5B DNA MER1_type 20 177 -1 37 39 0 0 chr2 220753151 220753202 -29934652 + AT_rich Low_complexity Low_complexity 1 51 0 188 333 14 14 chr2 220753582 220753654 -29934200 - L2 LINE L2 -497 2817 2746 726 301 131 67 chr2 220754253 220754995 -29932859 - L2 LINE L2 0 3313 2511 464 249 295 24 chr2 220755572 220755941 -29931913 - MLT1H LTR MaLR -14 535 67 24 53 0 0 chr2 220756588 220756626 -29931228 + AT_rich Low_complexity Low_complexity 1 38 0 357 24 0 0 chr2 220757193 220757235 -29930619 + (TG)n Simple_repeat Simple_repeat 2 43 0 487 210 204 6 chr2 220758066 220758223 -29929631 + MER5A DNA MER1_type 1 188 -1 302 289 144 29 chr2 220758227 220758400 -29929454 - MIR SINE MIR -16 246 54 318 312 168 0 chr2 220758537 220758662 -29929192 - L2 LINE L2 -1 3312 3167 349 150 38 0 chr2 220758955 220759035 -29928819 + (TATATG)n Simple_repeat Simple_repeat 4 86 0 581 230 74 159 chr2 220762381 220762816 -29925038 + L1ME3A LINE L1 5734 6131 -39 372 43 0 0 chr2 220762833 220762879 -29924975 + (ATG)n Simple_repeat Simple_repeat 1 46 0 214 322 94 29 chr2 220763049 220763220 -29924634 + MIR SINE MIR 19 200 -62 6226 86 21 3 chr2 220763379 220764248 -29923606 - L1PA11 LINE L1 -6 6168 5285 249 262 16 0 chr2 220764318 220764379 -29923475 + (CA)n Simple_repeat Simple_repeat 1 62 0 183 135 0 173 chr2 220765687 220765739 -29922115 - MIR SINE MIR 0 262 220 2073 122 3 0 chr2 220765866 220766160 -29921694 + AluSx SINE Alu 1 295 -17 1440 199 46 11 chr2 220768535 220768816 -29919038 - AluJo SINE Alu -21 291 1 755 156 8 0 chr2 220768816 220768944 -29918910 - L1MB2 LINE L1 -45 6126 5998 258 330 122 9 chr2 220769827 220769942 -29917912 + L2 LINE L2 3116 3243 -29 2050 125 0 16 chr2 220770568 220770872 -29916982 + AluSx SINE Alu 3 301 -11 346 219 0 0 chr2 220771122 220771195 -29916659 + L1MC2 LINE L1 6261 6333 -11 374 306 86 40 chr2 220771210 220771432 -29916422 + L3b LINE CR1 1180 1411 -172 21 0 0 0 chr2 220772843 220772864 -29914990 + AT_rich Low_complexity Low_complexity 1 21 0 30 77 0 0 chr2 220773639 220773704 -29914150 + AT_rich Low_complexity Low_complexity 1 65 0 21 57 0 0 chr2 220774124 220774159 -29913695 + AT_rich Low_complexity Low_complexity 1 35 0 892 291 28 20 chr2 220775772 220776304 -29911550 + MLT1G1 LTR MaLR 6 551 -16 254 300 38 25 chr2 220776917 220776997 -29910857 + L2 LINE L2 3191 3271 -1 1640 184 21 0 chr2 220777247 220777535 -29910319 + AluJo SINE Alu 3 296 -16 769 334 43 48 chr2 220777726 220777772 -29910082 - L2 LINE L2 -1 3312 3267 2032 121 0 4 chr2 220777772 220778112 -29909742 - AluSc SINE Alu 0 339 1 769 334 43 48 chr2 220778112 220778483 -29909371 - L2 LINE L2 -46 3267 2896 255 241 58 11 chr2 220778490 220778577 -29909277 + L1MEd LINE L1 1147 1237 -4882 343 277 138 67 chr2 220778598 220778988 -29908866 + L1MEd LINE L1 1258 1675 -4454 27 0 0 0 chr2 220779249 220779276 -29908578 + AT_rich Low_complexity Low_complexity 1 27 0 503 287 139 55 chr2 220779332 220779677 -29908177 - MLT1J2 LTR MaLR 0 450 77 21 36 0 0 chr2 220779867 220779895 -29907959 + AT_rich Low_complexity Low_complexity 1 28 0 337 122 23 46 chr2 220780122 220780253 -29907601 + (TA)n Simple_repeat Simple_repeat 2 129 0 288 0 0 0 chr2 220780253 220780285 -29907569 + (GA)n Simple_repeat Simple_repeat 2 33 0 9994 92 13 4 chr2 220781795 220784005 -29903849 - L1PA7 LINE L1 -4 6150 3929 186 43 0 0 chr2 220784402 220784425 -29903429 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 3653 253 119 27 chr2 220785100 220786138 -29901716 - L1ME2 LINE L1 -110 5988 5047 228 35 0 0 chr2 220786138 220786167 -29901687 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3653 253 119 27 chr2 220786167 220787580 -29900274 - L1ME2 LINE L1 -1051 5047 3299 2988 106 16 103 chr2 220787595 220788160 -29899694 - L1PB1 LINE L1 -1 6150 5635 1547 255 33 52 chr2 220788165 220788840 -29899014 - L1ME2 LINE L1 -5019 1051 390 308 161 21 21 chr2 220788846 220788939 -29898915 + (TA)n Simple_repeat Simple_repeat 1 93 0 189 0 0 0 chr2 220788969 220788990 -29898864 + (T)n Simple_repeat Simple_repeat 1 21 0 240 189 27 40 chr2 220789154 220789228 -29898626 + T-rich Low_complexity Low_complexity 5 77 0 22 0 0 0 chr2 220789661 220789683 -29898171 + AT_rich Low_complexity Low_complexity 1 22 0 756 146 39 0 chr2 220789684 220789814 -29898040 + L1PB2 LINE L1 6010 6144 -7 2490 77 0 0 chr2 220790320 220790633 -29897221 + AluSq SINE Alu 1 313 0 214 250 19 0 chr2 220790706 220790758 -29897096 + CT-rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr2 220792098 220792119 -29895735 + AT_rich Low_complexity Low_complexity 1 21 0 268 277 21 43 chr2 220792134 220792228 -29895626 + MIR3 SINE MIR 111 202 -6 180 0 0 0 chr2 220792402 220792422 -29895432 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1179 165 77 0 chr2 220792425 220792686 -29895168 - L1MA9 LINE L1 -6 6306 6026 221 306 208 48 chr2 220793625 220793919 -29893935 + L2 LINE L2 2636 2976 -338 5640 173 32 10 chr2 220793947 220795271 -29892583 - L1MC2 LINE L1 -11 6333 4978 567 282 143 23 chr2 220795319 220795578 -29892276 + L2 LINE L2 3024 3313 0 5467 171 37 58 chr2 220795936 220798033 -29889821 + L1MA7 LINE L1 3958 5883 -408 228 185 0 0 chr2 220798240 220798294 -29889560 + (TG)n Simple_repeat Simple_repeat 2 55 0 473 366 82 55 chr2 220799999 220800523 -29887331 + L2 LINE L2 2773 3308 -5 2153 121 3 6 chr2 220801014 220801328 -29886526 + AluSq SINE Alu 1 313 0 379 128 0 147 chr2 220801693 220801795 -29886059 - MER63 DNA MER1_type -166 895 809 37617 85 7 8 chr2 220801795 220807944 -29879910 - L1PA6 LINE L1 -4 6150 11 1015 287 30 68 chr2 220808495 220808599 -29879255 + L1ME1 LINE L1 36 142 -6254 1807 100 24 0 chr2 220808599 220808848 -29879006 - AluSc SINE Alu -12 297 43 1015 287 30 68 chr2 220808848 220809182 -29878672 + L1ME1 LINE L1 142 457 -5939 * 1156 234 151 7 chr2 220809178 220809636 -29878218 + L1ME1 LINE L1 2709 3232 -2983 299 247 14 0 chr2 220809621 220809694 -29878160 + L1ME1 LINE L1 3860 3933 -2282 * 1172 218 75 13 chr2 220809697 220810069 -29877785 + L1ME1 LINE L1 4528 4922 -1293 2104 243 80 32 chr2 220811015 220811672 -29876182 + L1ME1 LINE L1 5546 6226 -9 250 363 70 29 chr2 220812148 220812319 -29875535 - MIR3 SINE MIR -1 207 30 26 0 0 0 chr2 220812606 220812632 -29875222 + AT_rich Low_complexity Low_complexity 1 26 0 388 255 39 0 chr2 220812930 220813032 -29874822 - MIR SINE MIR -37 225 120 2829 163 25 24 chr2 220814263 220814293 -29873561 - L1M2 LINE L1 -491 5821 5793 360 94 0 0 chr2 220814293 220814346 -29873508 + (TG)n Simple_repeat Simple_repeat 2 54 0 2829 163 25 24 chr2 220814346 220814967 -29872887 - L1M2 LINE L1 -519 5793 5165 1998 118 18 4 chr2 220815022 220815301 -29872553 + AluSg SINE Alu 1 283 -27 27 0 0 0 chr2 220815301 220815328 -29872526 + AT_rich Low_complexity Low_complexity 1 27 0 699 245 21 0 chr2 220815345 220815537 -29872317 - L1M2 LINE L1 -977 5169 4974 1629 152 27 3 chr2 220815542 220815838 -29872016 + L1MA9 LINE L1 5863 6165 -147 1842 162 0 0 chr2 220815960 220816278 -29871576 + AluSx SINE Alu 1 318 0 5323 182 34 22 chr2 220817287 220818248 -29869606 - L1MA4A LINE L1 -7 6998 6001 2211 78 0 0 chr2 220818248 220818563 -29869291 - AluY SINE Alu 0 315 1 5323 182 34 22 chr2 220818563 220819361 -29868493 - L1MA4A LINE L1 -1004 6001 5214 * 6305 222 75 58 chr2 220819355 220820792 -29867062 - L1MA4A LINE L1 -2434 4414 3002 2794 10 0 0 chr2 220820792 220821100 -29866754 - AluYa5 SINE Alu -3 308 1 6305 222 75 58 chr2 220821100 220824009 -29863845 - L1MA4A LINE L1 -3846 3002 13 1973 151 7 0 chr2 220825004 220825303 -29862551 + AluSx SINE Alu 1 301 -11 4860 181 25 54 chr2 220825390 220826217 -29861637 - L1PB4 LINE L1 0 6213 5364 2207 170 34 12 chr2 220826217 220826634 -29861220 + MSTB LTR MaLR 1 426 0 4860 181 25 54 chr2 220826634 220827548 -29860306 - L1PB4 LINE L1 -849 5364 4426 232 220 0 0 chr2 220827548 220827607 -29860247 + LTR66 LTR ERVL 381 439 -171 483 63 0 0 chr2 220827609 220827672 -29860182 + (CA)n Simple_repeat Simple_repeat 2 64 0 4860 181 25 54 chr2 220827672 220827880 -29859974 - L1PB4 LINE L1 -1788 4425 4262 1031 275 74 25 chr2 220827880 220828244 -29859610 - LTR26 LTR ERV1 -221 382 1 5061 175 59 29 chr2 220828632 220828739 -29859115 - LTR49-int LTR ERV1 -641 5974 5872 2241 102 7 3 chr2 220828739 220829042 -29858812 - AluSc SINE Alu -5 304 1 5061 175 59 29 chr2 220829042 220830195 -29857659 - LTR49-int LTR ERV1 -743 5872 4573 3067 211 9 32 chr2 220830195 220830524 -29857330 + L1 LINE L1 3429 3764 -2382 360 0 0 0 chr2 220830524 220830564 -29857290 + (TAA)n Simple_repeat Simple_repeat 3 42 0 3067 211 9 32 chr2 220830564 220831008 -29856846 + L1 LINE L1 3764 4184 -1962 4187 247 24 46 chr2 220831025 220831981 -29855873 - L1PB4 LINE L1 -2740 3463 2487 2215 108 0 7 chr2 220831981 220832278 -29855576 - AluSx SINE Alu -17 295 1 4187 247 24 46 chr2 220832278 220833356 -29854498 - L1PB4 LINE L1 -3716 2487 1445 21036 178 10 12 chr2 220833356 220833698 -29854156 - L1PA13 LINE L1 -5 6809 6468 3821 90 2 4 chr2 220833698 220834210 -29853644 + MER9 LTR ERVK 1 511 0 21036 178 10 12 chr2 220834210 220839284 -29848570 - L1PA13 LINE L1 -346 6468 1396 393 265 34 61 chr2 220839287 220839434 -29848420 - L1PA13 LINE L1 -5529 1258 1116 766 262 94 41 chr2 220839436 220839954 -29847900 - L1PB4 LINE L1 -4912 1291 690 206 0 0 65 chr2 220839966 220839997 -29847857 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 417 371 10 10 chr2 220840055 220840257 -29847597 - L1PB4 LINE L1 -5649 555 354 182 328 156 0 chr2 220842952 220843074 -29844780 + MIR SINE MIR 112 252 -10 370 275 33 0 chr2 220843981 220844072 -29843782 + MIR SINE MIR 19 112 -150 1781 191 0 0 chr2 220844997 220845327 -29842527 - AluJo SINE Alu 0 330 1 412 339 31 26 chr2 220846610 220846802 -29841052 - MIR3 SINE MIR -14 194 2 405 285 46 13 chr2 220847021 220847172 -29840682 - MLT1L LTR MaLR -11 604 449 417 282 56 21 chr2 220847278 220847420 -29840434 - MLT1L LTR MaLR -333 282 136 2280 98 20 0 chr2 220847866 220848171 -29839683 - AluSx SINE Alu -1 311 1 356 88 35 0 chr2 220848626 220848683 -29839171 + MER41B LTR ERV1 480 538 -97 293 0 27 0 chr2 220848683 220848720 -29839134 + (CA)n Simple_repeat Simple_repeat 1 38 0 208 265 29 29 chr2 220849222 220849290 -29838564 + L2 LINE L2 3242 3309 -4 248 302 86 72 chr2 220849595 220849873 -29837981 + L2 LINE L2 2831 3112 -160 2138 117 29 35 chr2 220849967 220850344 -29837510 - THE1C LTR MaLR 0 375 1 360 294 27 55 chr2 220851675 220851821 -29836033 - MER5B DNA MER1_type -8 170 29 240 59 0 0 chr2 220852820 220852854 -29835000 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 352 286 31 0 chr2 220854755 220854853 -29833001 - MER5A DNA MER1_type -85 104 4 200 289 40 13 chr2 220855411 220855487 -29832367 + L2 LINE L2 3203 3280 -33 1228 219 160 28 chr2 220855594 220855982 -29831872 + MLT1D LTR MaLR 65 503 -2 2584 56 0 0 chr2 220856159 220856465 -29831389 + AluY SINE Alu 1 306 -5 525 239 153 0 chr2 220856797 220856973 -29830881 + MIR SINE MIR 32 234 -28 2138 118 0 23 chr2 220857648 220857954 -29829900 - AluSx SINE Alu -9 303 5 23 33 0 0 chr2 220858138 220858168 -29829686 + AT_rich Low_complexity Low_complexity 1 30 0 331 304 10 92 chr2 220858325 220858532 -29829322 - MIR SINE MIR 0 262 73 2151 121 0 31 chr2 220859480 220859803 -29828051 + AluSq SINE Alu 1 313 0 1108 287 60 16 chr2 220859916 220860348 -29827506 - LTR16A LTR ERVL 0 457 3 913 312 78 47 chr2 220860524 220861201 -29826653 - ERVL LTR ERVL -361 5293 4596 2067 144 0 0 chr2 220861469 220861768 -29826086 + AluSx SINE Alu 5 303 -9 271 381 17 13 chr2 220862024 220862255 -29825599 - ERVL LTR ERVL -3196 2568 2337 1824 301 107 81 chr2 220862275 220864433 -29823421 - ERVL LTR ERVL -2781 2215 2 651 305 100 11 chr2 220864444 220864791 -29823063 - LTR16A LTR ERVL -9 441 58 210 37 0 0 chr2 220864965 220864992 -29822862 + (TA)n Simple_repeat Simple_repeat 2 28 0 2323 83 3 3 chr2 220865248 220865548 -29822306 - AluSc SINE Alu -5 304 5 24 0 0 0 chr2 220865723 220865747 -29822107 + AT_rich Low_complexity Low_complexity 1 24 0 564 250 49 14 chr2 220867162 220867306 -29820548 - MER63A DNA MER1_type -15 195 47 1967 131 31 0 chr2 220867729 220868019 -29819835 + AluSg1 SINE Alu 1 299 -10 221 367 59 35 chr2 220870756 220871012 -29816842 + L2 LINE L2 639 900 -2414 277 327 182 6 chr2 220871376 220871535 -29816319 + L2 LINE L2 1237 1423 -1891 186 325 133 0 chr2 220872548 220872631 -29815223 + L2 LINE L2 2660 2753 -561 296 290 0 0 chr2 220872786 220872848 -29815006 + L2 LINE L2 2919 2980 -333 216 281 53 0 chr2 220872893 220872950 -29814904 + L2 LINE L2 3188 3247 -25 443 352 93 22 chr2 220873627 220874090 -29813764 - L2 LINE L2 -1012 2302 1807 22 35 0 0 chr2 220874265 220874294 -29813560 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr2 220874488 220874524 -29813330 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr2 220875271 220875295 -29812559 + AT_rich Low_complexity Low_complexity 1 24 0 702 334 160 13 chr2 220875402 220875857 -29811997 - L3 LINE CR1 -3 1574 1053 282 390 12 4 chr2 220875932 220876077 -29811777 + MIR SINE MIR 10 154 -66 359 350 73 21 chr2 220876086 220876372 -29811482 + L2 LINE L2 2661 2961 -353 450 0 0 0 chr2 220876379 220876429 -29811425 + (TTAG)n Simple_repeat Simple_repeat 3 52 0 2299 57 0 0 chr2 220876429 220876710 -29811144 - AluY SINE Alu -30 281 1 972 222 22 0 chr2 220878161 220878498 -29809356 + MLT1E1 LTR MaLR 65 654 0 701 238 64 17 chr2 220879044 220879216 -29808638 - MLT1E1 LTR MaLR -30 624 445 505 274 80 82 chr2 220879363 220880211 -29807643 + HAL1 LINE L1 874 1719 -788 3166 147 27 23 chr2 220880652 220881177 -29806677 + MER1A DNA MER1_type 1 527 0 23 54 0 0 chr2 220881523 220881560 -29806294 + AT_rich Low_complexity Low_complexity 1 37 0 1585 268 69 99 chr2 220883999 220884847 -29803007 - L1ME3A LINE L1 -61 6109 5302 330 172 52 0 chr2 220884862 220884920 -29802934 + MLT1G LTR MaLR 20 80 -510 * 1806 278 65 0 chr2 220884919 220885408 -29802446 + MLT1H1 LTR MaLR 27 547 -8 669 296 22 19 chr2 220885496 220885763 -29802091 + MLT1H1-int LTR MaLR 277 544 -827 468 261 74 92 chr2 220886441 220886766 -29801088 + MLT1H1-int LTR MaLR 1053 1371 0 1903 297 30 2 chr2 220886783 220887308 -29800546 + MLT1H1 LTR MaLR 16 555 0 226 219 228 0 chr2 220887415 220887538 -29800316 - L1ME3A LINE L1 -1343 4803 4653 2388 224 100 8 chr2 220887715 220888428 -29799426 - L1ME2 LINE L1 -205 5893 5126 555 239 88 38 chr2 220888464 220888849 -29799005 - L1ME2 LINE L1 -4754 1367 854 213 227 0 0 chr2 220889648 220889692 -29798162 + (TATG)n Simple_repeat Simple_repeat 2 45 0 2326 53 0 7 chr2 220889834 220890149 -29797705 + AluY SINE Alu 1 313 0 1226 204 24 8 chr2 220890384 220890634 -29797220 - MLT1A1 LTR MaLR -111 254 1 195 42 0 0 chr2 220890959 220890983 -29796871 + (TG)n Simple_repeat Simple_repeat 1 24 0 833 65 0 117 chr2 220892388 220892542 -29795312 + L1MA2 LINE L1 6169 6304 0 7374 23 0 0 chr2 220892567 220893427 -29794427 - L1PA3 LINE L1 -1161 4985 4126 7472 25 1 20 chr2 220893428 220894600 -29793254 + L1PA3 LINE L1 4998 6152 -3 210 167 0 0 chr2 220894603 220894639 -29793215 + A-rich Low_complexity Low_complexity 1 36 0 343 277 89 35 chr2 220895425 220895707 -29792147 - L1MEc LINE L1 -4721 1589 1293 637 298 58 37 chr2 220895752 220896340 -29791514 - L1MEc LINE L1 -4934 1185 586 259 311 54 0 chr2 220896588 220896662 -29791192 - MER91C DNA MER1_type -30 110 33 688 247 53 65 chr2 220897576 220897823 -29790031 - MIR SINE MIR 0 262 19 1284 204 50 44 chr2 220899170 220899631 -29788223 - LTR48 LTR ERV1 0 757 135 244 151 0 75 chr2 220899647 220899700 -29788154 - MER39 LTR ERV1 -655 52 4 661 281 59 5 chr2 220900492 220900758 -29787096 - MLT1I LTR MaLR -2 407 91 184 261 183 17 chr2 220901838 220901953 -29785901 + L2 LINE L2 1905 2038 -1276 552 266 58 105 chr2 220902089 220902536 -29785318 - MER65A LTR ERV1 0 445 20 337 243 27 0 chr2 220902731 220902805 -29785049 + L2 LINE L2 3237 3312 -1 325 349 110 44 chr2 220903226 220903771 -29784083 - L2 LINE L2 -402 2912 2332 2013 145 3 3 chr2 220904516 220904812 -29783042 - AluSg SINE Alu -14 296 1 23 33 0 0 chr2 220905730 220905760 -29782094 + AT_rich Low_complexity Low_complexity 1 30 0 231 316 84 82 chr2 220907129 220907534 -29780320 + L2 LINE L2 585 990 -2324 400 264 264 16 chr2 221008407 221008589 -29679265 + MIR SINE MIR 20 246 -16 255 229 42 62 chr2 221009185 221009236 -29678618 - L1M3 LINE L1 -378 5790 5740 2792 71 3 0 chr2 221009236 221009590 -29678264 + THE1A LTR MaLR 1 355 0 255 229 42 62 chr2 221009590 221009634 -29678220 - L1M3 LINE L1 -428 5740 5697 235 163 23 0 chr2 221009642 221009685 -29678169 + MIR SINE MIR 99 142 -120 192 300 240 4 chr2 221010454 221010704 -29677150 + L2 LINE L2 2378 2686 -628 228 348 98 0 chr2 221010998 221011110 -29676744 + L2 LINE L2 3175 3297 -16 308 266 158 32 chr2 221011352 221011510 -29676344 - L1ME4a LINE L1 -226 5895 5718 2251 88 3 14 chr2 221011522 221011819 -29676035 - AluY SINE Alu -17 294 1 458 297 16 8 chr2 221011920 221012048 -29675806 + MIR SINE MIR 1 129 -133 1231 166 31 8 chr2 221012049 221012308 -29675546 - L1MB1 LINE L1 0 6168 5904 3605 228 12 26 chr2 221012433 221012695 -29675159 + L1M4 LINE L1 4233 4497 -1649 2156 126 3 0 chr2 221012695 221013004 -29674850 + AluSx SINE Alu 1 310 -2 3605 228 12 26 chr2 221013004 221013947 -29673907 + L1M4 LINE L1 4497 5392 -754 357 253 139 66 chr2 221014618 221014784 -29673070 - L3 LINE CR1 -168 1409 1232 9119 54 15 13 chr2 221016347 221019234 -29668620 + L1PA2 LINE L1 240 3117 -3038 9119 23 0 0 chr2 221019234 221021089 -29666765 + L1PA2 LINE L1 4302 6155 0 9119 54 15 13 chr2 221021089 221022038 -29665816 + L1PA2 LINE L1 3117 6155 0 991 120 0 0 chr2 221022354 221022487 -29665367 + AluSq/x SINE Alu 1 133 -180 2372 104 0 0 chr2 221022490 221022799 -29665055 + AluSg SINE Alu 1 309 -1 207 105 0 26 chr2 221022805 221022843 -29665011 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 17720 34 5 0 chr2 221023029 221026915 -29660939 + L1PA4 LINE L1 2254 6154 -1 244 113 94 0 chr2 221027210 221027263 -29660591 - L1ME4a LINE L1 -103 6018 5961 368 298 124 6 chr2 221028132 221028354 -29659500 + Charlie8 DNA MER1_type 7 272 -2145 2157 107 26 47 chr2 221028631 221029014 -29658840 + THE1C LTR MaLR 1 375 0 1114 172 23 41 chr2 221029184 221029405 -29658449 - AluSx SINE Alu -95 217 1 250 305 34 17 chr2 221031438 221031556 -29656298 - MER5A DNA MER1_type -27 162 43 * 321 250 43 11 chr2 221031466 221031558 -29656296 + MER5A DNA MER1_type 66 160 -29 910 247 85 33 chr2 221031788 221032059 -29655795 - MER99 DNA DNA -5 823 539 489 153 10 31 chr2 221032083 221032181 -29655673 + FLAM SINE Alu 38 133 -10 258 150 17 83 chr2 221032188 221032248 -29655606 + AluSp SINE Alu 129 184 -119 709 206 0 37 chr2 221032366 221032502 -29655352 + FRAM SINE Alu 21 151 -25 742 218 31 6 chr2 221032540 221032889 -29654965 - MER99 DNA DNA -286 542 225 2225 116 0 0 chr2 221033152 221033446 -29654408 + AluSx SINE Alu 1 294 -18 291 233 186 0 chr2 221033642 221033728 -29654126 - MER99 DNA DNA -725 103 2 1777 114 114 14 chr2 221033755 221034036 -29653818 - AluSx SINE Alu -3 309 1 419 215 85 39 chr2 221034109 221034239 -29653615 - MIR SINE MIR -49 213 78 237 250 88 0 chr2 221034263 221034343 -29653511 - L1ME LINE L1 -333 5829 5743 206 302 0 0 chr2 221034969 221035022 -29652832 + MIR3 SINE MIR 113 165 -43 2208 124 0 0 chr2 221036339 221036646 -29651208 + AluSx SINE Alu 1 307 -5 1243 34 0 0 chr2 221037171 221037320 -29650534 - L1PA4 LINE L1 -7 6148 6000 214 303 70 11 chr2 221037740 221037855 -29649999 + MIR SINE MIR 45 164 -44 1748 188 94 58 chr2 221038392 221038597 -29649257 - MLT1D LTR MaLR -8 497 301 2255 107 3 3 chr2 221038597 221038906 -29648948 - AluSg1 SINE Alu 0 309 1 1748 188 94 58 chr2 221038906 221039180 -29648674 - MLT1D LTR MaLR -204 301 1 1811 107 13 79 chr2 221039341 221039659 -29648195 + AluSq SINE Alu 1 297 -16 495 292 19 90 chr2 221039743 221040109 -29647745 - MER102b DNA MER1_type -1 340 1 971 277 125 30 chr2 221040493 221040933 -29646921 + MLT1L LTR MaLR 5 486 -129 1732 156 0 43 chr2 221041766 221042067 -29645787 + AluJo SINE Alu 1 288 -24 21 0 0 0 chr2 221042067 221042088 -29645766 + AT_rich Low_complexity Low_complexity 1 21 0 3321 114 16 6 chr2 221042223 221042723 -29645131 - Tigger3(Golem) DNA MER2_type 0 3029 2525 307 204 19 0 chr2 221042723 221042777 -29645077 - Tigger3(Golem) DNA MER2_type -2974 55 1 21 0 0 0 chr2 221042999 221043020 -29644834 + AT_rich Low_complexity Low_complexity 1 21 0 26 74 0 0 chr2 221043336 221043390 -29644464 + AT_rich Low_complexity Low_complexity 1 54 0 195 184 0 0 chr2 221043454 221043492 -29644362 + (CATA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr2 221043687 221043710 -29644144 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 221044157 221044187 -29643667 + AT_rich Low_complexity Low_complexity 1 30 0 620 289 98 70 chr2 221044393 221044641 -29643213 + L3 LINE CR1 902 1142 -435 1624 163 6 27 chr2 221044641 221044979 -29642875 + L1MB3 LINE L1 5851 6181 -2 620 289 98 70 chr2 221044979 221045232 -29642622 + L3 LINE CR1 1142 1417 -160 180 311 49 0 chr2 221045327 221045388 -29642466 + MIR SINE MIR 19 82 -126 400 156 0 0 chr2 221045450 221045514 -29642340 - MLT1B LTR MaLR -2 388 325 334 343 58 23 chr2 221045663 221045835 -29642019 + HAL1 LINE L1 756 933 -1574 230 227 172 31 chr2 221045844 221046007 -29641847 + HAL1 LINE L1 975 1160 -1347 1435 74 5 11 chr2 221046042 221046054 -29641800 + AluY SINE Alu 121 132 -179 2568 36 7 7 chr2 221046054 221046363 -29641491 + AluYb8 SINE Alu 1 309 -9 1435 74 5 11 chr2 221046363 221046540 -29641314 + AluY SINE Alu 132 309 -2 31 0 0 0 chr2 221046543 221046574 -29641280 + AT_rich Low_complexity Low_complexity 1 31 0 421 226 97 0 chr2 221046600 221046693 -29641161 + FLAM_A SINE Alu 1 102 -40 209 217 0 0 chr2 221046724 221046770 -29641084 + (TA)n Simple_repeat Simple_repeat 1 46 0 254 320 17 39 chr2 221046816 221046947 -29640907 - MER5A DNA MER1_type -36 153 18 351 0 0 0 chr2 221047761 221047800 -29640054 + (TA)n Simple_repeat Simple_repeat 2 40 0 260 374 9 0 chr2 221050204 221050311 -29637543 - MIR3 SINE MIR -37 171 64 339 297 149 40 chr2 221051592 221051888 -29635966 - L1MC4a LINE L1 -1749 6059 5732 373 299 0 0 chr2 221052120 221052207 -29635647 + L2 LINE L2 3223 3309 -4 1527 179 24 18 chr2 221053151 221053487 -29634367 - L1MB8 LINE L1 -12 6166 5829 27 49 0 0 chr2 221053499 221053540 -29634314 + AT_rich Low_complexity Low_complexity 1 41 0 1815 154 4 0 chr2 221053544 221053811 -29634043 - AluJo SINE Alu -44 268 1 2141 167 32 2 chr2 221053814 221054398 -29633456 - L1MB8 LINE L1 -512 5672 5072 211 289 0 0 chr2 221055815 221055860 -29631994 - L2 LINE L2 -111 3161 3117 420 361 65 2 chr2 221055944 221056155 -29631699 - MIR SINE MIR -15 247 26 680 255 9 0 chr2 221056531 221056709 -29631145 - L1MA10 LINE L1 -5 6161 5986 194 333 24 24 chr2 221056781 221056865 -29630989 - L2 LINE L2 -352 2920 2837 1736 219 66 78 chr2 221056939 221057488 -29630366 + MLT1F LTR MaLR 1 542 0 232 305 0 0 chr2 221057982 221058041 -29629813 + MER5B DNA MER1_type 32 90 -88 280 341 12 0 chr2 221058299 221058381 -29629473 + MER5B DNA MER1_type 96 178 0 204 152 0 22 chr2 221059649 221059695 -29628159 + T-rich Low_complexity Low_complexity 4 48 0 409 276 86 40 chr2 221060042 221060346 -29627508 + L1MC4a LINE L1 5666 5983 -1825 1155 160 5 44 chr2 221060461 221060695 -29627159 + AluJb SINE Alu 87 312 0 210 282 32 81 chr2 221060951 221061075 -29626779 - L2 LINE L2 0 3313 3196 1151 301 173 30 chr2 221061116 221061502 -29626352 + L1MEc LINE L1 36 365 -6031 1090 139 0 0 chr2 221061502 221061668 -29626186 - L1PA8 LINE L1 -13 6159 5994 1151 301 173 30 chr2 221061668 221062048 -29625806 + L1MEc LINE L1 365 689 -5707 2337 155 30 28 chr2 221062048 221062480 -29625374 + Tigger2a DNA MER2_type 1 433 -1 1151 301 173 30 chr2 221062480 221063416 -29624438 + L1MEc LINE L1 689 1983 -4413 * 5508 112 11 8 chr2 221063404 221064228 -29623626 - L1PA13 LINE L1 -5 6158 5333 1699 158 0 4 chr2 221064328 221064587 -29623267 - AluJb SINE Alu -52 260 3 553 289 78 86 chr2 221065136 221066103 -29621751 - HAL1 LINE L1 -696 1811 853 931 272 113 64 chr2 221066223 221066720 -29621134 + MLT1G1 LTR MaLR 75 595 0 966 209 61 61 chr2 221066801 221067043 -29620811 + L1ME2 LINE L1 5851 6095 -69 1664 201 0 7 chr2 221067043 221067341 -29620513 + AluJb SINE Alu 1 296 -16 966 209 61 61 chr2 221067341 221067394 -29620460 + L1ME2 LINE L1 6094 6146 -18 1814 137 115 3 chr2 221067749 221068063 -29619791 - MER47A DNA MER2_type 0 366 18 194 315 19 0 chr2 221068077 221068131 -29619723 + L2 LINE L2 3132 3186 -86 226 331 97 0 chr2 221068604 221068728 -29619126 - HAL1 LINE L1 -2370 137 2 281 267 76 9 chr2 221068774 221068879 -29618975 + MIR3 SINE MIR 82 193 -15 23 0 0 0 chr2 221071368 221071391 -29616463 + AT_rich Low_complexity Low_complexity 1 23 0 308 262 140 0 chr2 221071399 221071506 -29616348 + MIR SINE MIR 12 133 -129 * 445 280 109 6 chr2 221071488 221071663 -29616191 - MIR SINE MIR -63 199 7 2274 62 0 0 chr2 221071840 221072139 -29615715 + AluY SINE Alu 12 310 0 352 279 64 55 chr2 221072386 221072605 -29615249 - L2 LINE L2 -407 2907 2687 257 397 25 25 chr2 221073040 221073161 -29614693 - L2 LINE L2 -12 3260 3140 353 322 141 38 chr2 221073394 221073869 -29613985 + L2 LINE L2 2555 3079 -193 278 247 99 25 chr2 221074946 221075027 -29612827 + MER69 DNA AcHobo 4 90 -1136 * 740 189 119 20 chr2 221075012 221075439 -29612415 + MER69 DNA AcHobo 1937 2445 -81 661 153 0 125 chr2 221075457 221075633 -29612221 - MER5C DNA MER1_type -170 154 1 408 259 74 19 chr2 221075679 221075841 -29612013 + HAL1 LINE L1 1578 1748 -759 2156 107 3 3 chr2 221075843 221076132 -29611722 + AluSx SINE Alu 1 289 -23 734 167 154 19 chr2 221076148 221076310 -29611544 + AluJo SINE Alu 5 188 -124 270 56 0 0 chr2 221076310 221076346 -29611508 + (T)n Simple_repeat Simple_repeat 1 36 0 16085 195 15 15 chr2 221076577 221078885 -29608969 - L1P4 LINE L1 -655 5508 3204 234 0 0 0 chr2 221078885 221078911 -29608943 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 16085 195 15 15 chr2 221078911 221080070 -29607784 - L1P4 LINE L1 -2959 3204 2047 2337 105 0 0 chr2 221080102 221080406 -29607448 - AluSx SINE Alu -8 304 1 239 250 40 0 chr2 221080407 221080483 -29607371 + L1MEc LINE L1 1999 2077 -4319 1048 211 43 36 chr2 221080558 221080837 -29607017 + MER69 DNA AcHobo 2233 2513 -13 319 189 117 81 chr2 221081030 221081141 -29606713 + MER94 DNA DNA 2 116 -18 228 274 0 0 chr2 221081261 221081323 -29606531 + L1MC4 LINE L1 6640 6701 -1341 195 277 0 0 chr2 221081325 221081390 -29606464 + (TA)n Simple_repeat Simple_repeat 2 66 0 1243 202 34 3 chr2 221081450 221081922 -29605932 - MER34 LTR ERV1 0 542 29 2048 87 4 0 chr2 221083260 221083525 -29604329 + AluY SINE Alu 39 304 -7 269 180 0 16 chr2 221083549 221083610 -29604244 + CT-rich Low_complexity Low_complexity 2 61 0 21 57 0 0 chr2 221083846 221083881 -29603973 + AT_rich Low_complexity Low_complexity 1 35 0 1234 141 130 105 chr2 221084010 221084310 -29603544 - AluSx SINE Alu 0 307 1 248 382 7 7 chr2 221084380 221084532 -29603322 - L1M4 LINE L1 -467 5694 5543 429 315 75 44 chr2 221084638 221085172 -29602682 - L1M4 LINE L1 -748 5381 4865 8764 116 14 6 chr2 221085172 221086448 -29601406 + HSMAR1 DNA Mariner 1 1287 0 429 315 75 44 chr2 221086448 221086979 -29600875 - L1M4 LINE L1 -1264 4865 4283 364 320 19 43 chr2 221086984 221087240 -29600614 - L1M4 LINE L1 -4936 1183 934 270 0 0 0 chr2 221087305 221087335 -29600519 + (CA)n Simple_repeat Simple_repeat 1 30 0 1956 78 0 7 chr2 221087353 221087623 -29600231 - L1PA7 LINE L1 0 6154 5887 3557 87 2 0 chr2 221087623 221088117 -29599737 + L1P LINE L1 4418 4912 -1234 230 278 52 52 chr2 221088889 221088986 -29598868 + MIR SINE MIR 89 185 -77 931 272 61 46 chr2 221089548 221089942 -29597912 + LTR16A1 LTR ERVL 58 457 0 1288 80 65 0 chr2 221090620 221090717 -29597137 - L1PA8A LINE L1 -49 6082 5993 288 0 0 0 chr2 221090717 221090749 -29597105 + (TG)n Simple_repeat Simple_repeat 2 33 0 1288 80 65 0 chr2 221090749 221090852 -29597002 - L1PA8A LINE L1 -138 5993 5869 2187 100 17 0 chr2 221090960 221091250 -29596604 - AluSx SINE Alu -17 295 1 902 279 169 37 chr2 221092668 221093177 -29594677 + MLT1K LTR MaLR 3 578 -10 1006 175 22 0 chr2 221093593 221093776 -29594078 - Tigger7 DNA MER2_type -1 2486 2300 * 1412 240 7 0 chr2 221093772 221094051 -29593803 - Tigger7 DNA MER2_type -2206 281 1 284 306 0 0 chr2 221094486 221094558 -29593296 - tRNA-Ile-ATT tRNA tRNA -3 74 3 1479 178 89 68 chr2 221094824 221095206 -29592648 + MLT1B LTR MaLR 1 390 0 186 43 0 0 chr2 221095911 221095934 -29591920 + (TG)n Simple_repeat Simple_repeat 2 24 0 281 301 63 18 chr2 221095934 221096122 -29591732 - L1ME LINE L1 -462 5642 5438 207 281 16 0 chr2 221096142 221096206 -29591648 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 827 317 57 22 chr2 221096225 221096720 -29591134 - L1ME3A LINE L1 -226 5944 5433 527 231 8 52 chr2 221096759 221096893 -29590961 + MER63A DNA MER1_type 48 175 -35 25 0 0 0 chr2 221096938 221096963 -29590891 + AT_rich Low_complexity Low_complexity 1 25 0 780 264 39 23 chr2 221097230 221097488 -29590366 + MIR SINE MIR 1 262 0 2611 100 11 0 chr2 221097569 221097940 -29589914 - L1PB1 LINE L1 0 6151 5777 180 0 0 0 chr2 221097942 221097962 -29589892 + (TTC)n Simple_repeat Simple_repeat 2 21 0 1325 32 0 0 chr2 221097963 221098117 -29589737 - L1PA3 LINE L1 -5 6150 5997 321 284 14 43 chr2 221098122 221098330 -29589524 - L1ME3A LINE L1 -1550 4596 4395 253 280 206 23 chr2 221098711 221099183 -29588671 - L1ME LINE L1 -1488 4641 4084 2681 182 72 64 chr2 221099186 221099909 -29587945 - Charlie1a DNA MER1_type -1744 1017 212 3032 180 90 10 chr2 221099909 221100521 -29587333 + MER67B LTR ERV1 1 661 0 2681 182 72 64 chr2 221100521 221100659 -29587195 - Charlie1a DNA MER1_type -2549 212 77 223 149 40 27 chr2 221100659 221100733 -29587121 + (TTATA)n Simple_repeat Simple_repeat 1 75 0 2277 108 0 0 chr2 221100747 221101042 -29586812 + AluSx SINE Alu 1 295 -17 335 302 99 17 chr2 221101397 221101569 -29586285 - L1ME LINE L1 -5067 1052 867 269 151 19 0 chr2 221102012 221102065 -29585789 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 21 36 0 0 chr2 221102166 221102194 -29585660 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 221102214 221102236 -29585618 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 216 0 0 0 chr2 221102235 221102259 -29585595 + (GA)n Simple_repeat Simple_repeat 1 24 0 193 348 0 0 chr2 221102429 221102475 -29585379 + L2 LINE L2 3205 3250 -22 314 327 60 90 chr2 221103119 221103419 -29584435 - L2 LINE L2 -17 3255 2965 7041 33 3 1 chr2 221103555 221104403 -29583451 + L1PA4 LINE L1 5302 6151 -4 291 339 58 23 chr2 221106073 221106244 -29581610 + L2 LINE L2 2214 2390 -924 400 278 29 67 chr2 221106970 221107179 -29580675 + L1ME3A LINE L1 5841 6041 -129 1969 163 118 22 chr2 221107255 221107703 -29580151 + L1MB1 LINE L1 5677 6167 -1 195 341 104 43 chr2 221110154 221110365 -29577489 + L2 LINE L2 2954 3177 -95 189 0 0 0 chr2 221110984 221111005 -29576849 + (A)n Simple_repeat Simple_repeat 1 21 0 213 286 48 12 chr2 221112193 221112277 -29575577 - MIR SINE MIR -16 246 160 409 284 25 80 chr2 221112281 221112482 -29575372 + MIR SINE MIR 61 250 -12 272 222 61 61 chr2 221113759 221113939 -29573915 + L1MC5 LINE L1 7610 7789 -172 1865 155 40 0 chr2 221113941 221114237 -29573617 + AluJb SINE Alu 5 312 0 395 171 13 0 chr2 221114278 221114354 -29573500 + L1MA5 LINE L1 5859 5935 -365 261 231 92 46 chr2 221114356 221114486 -29573368 + MIR SINE MIR 120 255 -7 693 320 5 0 chr2 221114629 221114835 -29573019 + MIR SINE MIR 56 262 0 29 28 0 0 chr2 221115138 221115174 -29572680 + AT_rich Low_complexity Low_complexity 1 36 0 198 0 0 0 chr2 221115814 221115836 -29572018 + (T)n Simple_repeat Simple_repeat 1 22 0 24 0 0 0 chr2 221116425 221116449 -29571405 + AT_rich Low_complexity Low_complexity 1 24 0 810 183 59 59 chr2 221117737 221117956 -29569898 + MER20 DNA MER1_type 1 219 0 320 75 0 0 chr2 221119791 221119831 -29568023 - Alu SINE Alu -262 40 1 291 140 0 0 chr2 221120409 221120459 -29567395 + (TG)n Simple_repeat Simple_repeat 2 51 0 913 243 22 22 chr2 221121245 221121471 -29566383 + L3b LINE CR1 1108 1333 -250 1675 158 18 0 chr2 221121608 221121881 -29565973 + AluJo SINE Alu 1 278 -34 198 98 98 0 chr2 221121897 221121958 -29565896 + (TGAA)n Simple_repeat Simple_repeat 2 68 0 235 284 92 28 chr2 221122006 221122115 -29565739 + L2 LINE L2 3156 3271 -1 288 293 114 16 chr2 221122282 221122405 -29565449 - MIR SINE MIR -70 192 58 1345 188 32 14 chr2 221122513 221122795 -29565059 + L1M4 LINE L1 5419 5705 -479 22 35 0 0 chr2 221122796 221122825 -29565029 + AT_rich Low_complexity Low_complexity 1 29 0 203 156 0 0 chr2 221123149 221123181 -29564673 + A-rich Low_complexity Low_complexity 2 33 0 624 189 22 78 chr2 221123270 221123450 -29564404 - MLT1J LTR MaLR 0 511 342 335 253 191 31 chr2 221123531 221123693 -29564161 - MLT1J LTR MaLR -323 188 1 528 304 92 31 chr2 221124088 221124424 -29563430 + MLT1G LTR MaLR 16 366 -176 26 0 0 0 chr2 221125277 221125303 -29562551 + AT_rich Low_complexity Low_complexity 1 26 0 4633 239 119 14 chr2 221125671 221127419 -29560435 + L1MA4 LINE L1 1 2215 -4994 419 333 76 23 chr2 221128567 221128738 -29559116 + MIR3 SINE MIR 20 199 -9 12469 162 33 63 chr2 221129926 221130248 -29557606 + L1MA4 LINE L1 2214 2544 -4818 2300 81 3 0 chr2 221130248 221130533 -29557321 + AluY SINE Alu 1 286 -25 270 56 0 0 chr2 221130537 221130573 -29557281 + (TAA)n Simple_repeat Simple_repeat 3 38 0 12469 162 33 63 chr2 221130573 221130968 -29556886 + L1MA4 LINE L1 2547 2952 -4410 2246 160 64 0 chr2 221130968 221131129 -29556725 - MSTB1 LTR MaLR 0 432 283 210 37 0 0 chr2 221131129 221131156 -29556698 + (CAA)n Simple_repeat Simple_repeat 2 28 0 2246 160 64 0 chr2 221131156 221131400 -29556454 - MSTB1 LTR MaLR -149 283 1 12469 162 33 63 chr2 221131400 221135975 -29551879 + L1MA4 LINE L1 2952 7356 -6 309 343 101 9 chr2 221136278 221136469 -29551385 - MIR SINE MIR -58 204 4 250 191 0 0 chr2 221137425 221137467 -29550387 - 5S rRNA rRNA -79 42 1 306 0 0 0 chr2 221137674 221137708 -29550146 + (A)n Simple_repeat Simple_repeat 1 34 0 313 99 44 22 chr2 221138348 221138439 -29549415 + (GGGTG)n Simple_repeat Simple_repeat 4 96 0 282 29 0 0 chr2 221138669 221138704 -29549150 + (A)n Simple_repeat Simple_repeat 1 35 0 442 313 116 22 chr2 221140641 221140865 -29546989 + MIR SINE MIR 3 247 -15 24 0 0 0 chr2 221141836 221141860 -29545994 + AT_rich Low_complexity Low_complexity 1 24 0 558 277 156 50 chr2 221142985 221143831 -29544023 + HAL1 LINE L1 1548 2483 -24 2045 124 7 7 chr2 221143911 221144202 -29543652 - AluSc SINE Alu -18 291 1 22 0 0 0 chr2 221144462 221144484 -29543370 + AT_rich Low_complexity Low_complexity 1 22 0 322 282 73 32 chr2 221144806 221144930 -29542924 + L2 LINE L2 3160 3288 -25 1821 182 10 0 chr2 221145173 221145481 -29542373 + AluJo SINE Alu 1 311 -1 21 0 0 0 chr2 221145514 221145535 -29542319 + AT_rich Low_complexity Low_complexity 1 21 0 318 261 50 76 chr2 221146520 221146639 -29541215 + MIR3 SINE MIR 65 180 -28 1627 88 22 18 chr2 221146922 221147150 -29540704 + AluSg/x SINE Alu 79 307 -5 230 311 50 0 chr2 221147178 221147297 -29540557 + L1ME LINE L1 5731 5855 -266 2795 220 113 35 chr2 221147429 221148719 -29539135 + L1PB1 LINE L1 6 1540 -5323 625 140 0 0 chr2 221148719 221148819 -29539035 - LTR12 LTR ERV1 0 714 615 325 214 11 0 chr2 221148822 221148911 -29538943 - LTR30 LTR ERV1 -80 642 553 1462 122 36 51 chr2 221148912 221149288 -29538566 - LTR12 LTR ERV1 -429 1683 57 13369 191 29 22 chr2 221149297 221149845 -29538009 + L1PB1 LINE L1 1538 2080 -4787 2842 6 0 3 chr2 221149845 221150158 -29537696 + AluYb8 SINE Alu 1 312 -6 13369 191 29 22 chr2 221150158 221153299 -29534555 + L1PB1 LINE L1 2080 5304 -1563 4983 25 2 28 chr2 221153299 221153899 -29533955 + L1PA3 LINE L1 5561 6152 -3 13369 191 29 22 chr2 221153899 221155476 -29532378 + L1PB1 LINE L1 5304 6867 0 22 35 0 0 chr2 221157585 221157614 -29530240 + AT_rich Low_complexity Low_complexity 1 29 0 6185 79 22 38 chr2 221159487 221160642 -29527212 + SVA Other Other 430 1386 0 21 0 0 0 chr2 221160822 221160843 -29527011 + AT_rich Low_complexity Low_complexity 1 21 0 2701 237 23 12 chr2 221161551 221162196 -29525658 + MER82 DNA MER2_type 2 653 0 354 333 44 37 chr2 221162197 221162332 -29525522 - MIR SINE MIR -110 152 17 25 0 0 0 chr2 221162833 221162858 -29524996 + AT_rich Low_complexity Low_complexity 1 25 0 296 208 23 12 chr2 221163768 221163858 -29523996 - Charlie8 DNA MER1_type 0 2417 252 22 0 0 0 chr2 221163877 221163899 -29523955 + AT_rich Low_complexity Low_complexity 1 22 0 269 260 240 10 chr2 221163977 221164073 -29523781 - MIR3 SINE MIR -49 159 42 1565 181 0 14 chr2 221165525 221165801 -29522053 + AluJo SINE Alu 1 272 -40 21 0 0 0 chr2 221165905 221165926 -29521928 + AT_rich Low_complexity Low_complexity 1 21 0 2003 147 43 0 chr2 221167167 221167513 -29520341 - MER46B DNA MER2_type 0 236 1 2360 101 0 0 chr2 221170461 221170768 -29517086 - AluY SINE Alu -4 307 1 358 330 74 28 chr2 221171088 221171264 -29516590 - MIR3 SINE MIR -6 202 19 1373 172 92 27 chr2 221171277 221171615 -29516239 - MER46B DNA MER2_type -1 235 1 554 239 0 0 chr2 221172293 221172410 -29515444 - LTR48 LTR ERV1 -627 160 44 22 35 0 0 chr2 221172743 221172772 -29515082 + AT_rich Low_complexity Low_complexity 1 29 0 338 255 157 33 chr2 221173491 221173644 -29514210 - L1ME LINE L1 -349 5772 5601 219 296 25 25 chr2 221174090 221174171 -29513683 + L3b LINE CR1 1262 1342 -241 412 206 0 0 chr2 221175064 221175132 -29512722 + FRAM/FAM SINE Alu 1 68 -108 486 251 70 6 chr2 221176235 221176406 -29511448 - L1MD2 LINE L1 -13 6346 6165 1815 118 81 0 chr2 221176407 221176678 -29511176 - AluSg SINE Alu -17 293 1 2444 76 0 3 chr2 221177445 221177749 -29510105 - AluY SINE Alu -8 303 1 5592 24 0 2 chr2 221179547 221180477 -29507377 + L1PA4 LINE L1 5016 5943 -212 1823 78 8 0 chr2 221180588 221180890 -29506964 + L1PA4 LINE L1 5895 6198 0 996 328 68 24 chr2 221181837 221182294 -29505560 - L2 LINE L2 -1 3312 2836 286 269 26 13 chr2 221182771 221182849 -29505005 + MIR SINE MIR 74 152 -110 413 221 8 8 chr2 221183152 221183274 -29504580 - L1 LINE L1 -2797 3349 3228 2043 145 6 16 chr2 221183284 221183595 -29504259 - AluSx SINE Alu -4 308 1 451 250 259 9 chr2 221183763 221183983 -29503871 + L2 LINE L2 2243 2517 -797 321 278 150 94 chr2 221183988 221184402 -29503452 + L2 LINE L2 2862 3298 -15 210 277 0 0 chr2 221184436 221184483 -29503371 + L2 LINE L2 3219 3265 -7 22 0 0 0 chr2 221184532 221184554 -29503300 + AT_rich Low_complexity Low_complexity 1 22 0 249 252 122 70 chr2 221185266 221185381 -29502473 - MIR3 SINE MIR -3 205 85 265 299 49 56 chr2 221185764 221185908 -29501946 - L2 LINE L2 -1334 1980 1838 302 197 91 0 chr2 221186419 221186485 -29501369 + AluJ/FRAM SINE Alu 228 299 -3 286 341 33 0 chr2 221187453 221187544 -29500310 + L3b LINE CR1 1404 1497 -86 950 137 137 0 chr2 221188202 221188377 -29499477 + MSTA LTR MaLR 1 199 -229 4971 96 9 1 chr2 221188377 221189118 -29498736 + L1PB1 LINE L1 5405 6151 0 666 171 59 38 chr2 221189136 221189342 -29498512 + THE1C LTR MaLR 183 375 0 1235 175 8 0 chr2 221189762 221190002 -29497852 + Tigger5 DNA MER2_type 2082 2323 0 8314 49 9 0 chr2 221190399 221191359 -29496495 + LTR5 LTR ERVK 1 969 0 293 118 20 0 chr2 221192013 221192064 -29495790 + L1ME3A LINE L1 6104 6155 -15 340 285 9 0 chr2 221192080 221192185 -29495669 - MIR3 SINE MIR -9 199 93 2265 96 0 0 chr2 221192387 221192680 -29495174 + AluSg SINE Alu 1 293 -17 401 272 154 29 chr2 221193080 221193216 -29494638 - MIR SINE MIR -108 154 2 2244 126 0 0 chr2 221194098 221194399 -29493455 + AluSx SINE Alu 1 301 -11 671 225 135 0 chr2 221194487 221194665 -29493189 + MER58C DNA MER1_type 13 214 -1 457 246 62 23 chr2 221195065 221195195 -29492659 + L2 LINE L2 3179 3313 0 2433 60 3 0 chr2 221195634 221195936 -29491918 + AluY SINE Alu 1 303 -8 262 321 62 12 chr2 221196528 221196690 -29491164 + MER5A DNA MER1_type 20 189 0 301 309 110 87 chr2 221197193 221197720 -29490134 - L1M2 LINE L1 -5716 1133 595 338 330 129 51 chr2 221198485 221198897 -29488957 + L2 LINE L2 2828 3271 -1 239 296 0 25 chr2 221198909 221198990 -29488864 - MIR SINE MIR -35 227 149 1095 226 94 9 chr2 221198995 221199314 -29488540 + MLT1A2 LTR MaLR 20 365 -9 181 217 0 0 chr2 221199326 221199372 -29488482 - MIR SINE MIR -128 134 89 688 170 0 9 chr2 221199377 221199489 -29488365 + FLAM_A SINE Alu 14 124 -18 1860 141 0 24 chr2 221199620 221199910 -29487944 - AluJo SINE Alu -24 288 6 220 306 0 0 chr2 221199932 221199981 -29487873 - MIR SINE MIR -87 121 73 2142 126 10 0 chr2 221200167 221200468 -29487386 + AluSx SINE Alu 1 304 -8 479 270 92 41 chr2 221200925 221201121 -29486733 + MIR SINE MIR 31 236 -26 863 149 0 58 chr2 221201245 221201399 -29486455 - AluSg/x SINE Alu -30 282 138 350 289 74 53 chr2 221202821 221203011 -29484843 + MIR SINE MIR 2 195 -67 392 239 128 8 chr2 221204899 221205016 -29482838 + MIR SINE MIR 124 254 -8 309 270 30 0 chr2 221205061 221205161 -29482693 + L1MCa LINE L1 1962 2064 -4362 2409 115 25 3 chr2 221205161 221205517 -29482337 + THE1B LTR MaLR 1 364 0 394 353 29 6 chr2 221205755 221205925 -29481929 - MIR SINE MIR -71 191 18 422 182 0 0 chr2 221206385 221206462 -29481392 - MER116 DNA Mariner -3 77 1 1543 200 46 37 chr2 221206811 221207265 -29480589 - MER63C DNA MER1_type 0 931 474 471 233 57 13 chr2 221207262 221207421 -29480433 - MER63C DNA MER1_type -306 624 459 * 1301 106 15 0 chr2 221207421 221207619 -29480235 + L1PB1 LINE L1 5948 6148 -3 225 183 17 17 chr2 221207643 221207703 -29480151 - MER63C DNA MER1_type -456 474 415 1998 126 7 0 chr2 221207742 221208027 -29479827 - AluSx SINE Alu -25 287 1 280 131 434 0 chr2 221208028 221208150 -29479704 - MER63C DNA MER1_type -501 429 255 2127 129 7 0 chr2 221208379 221208681 -29479173 + AluSx SINE Alu 1 304 -8 378 303 108 15 chr2 221208967 221209162 -29478692 + L2 LINE L2 3099 3311 -2 2902 189 123 14 chr2 221209379 221210089 -29477765 - LTR48 LTR ERV1 0 787 1 2272 96 13 0 chr2 221210246 221210547 -29477307 + AluSq SINE Alu 1 305 -8 259 237 0 17 chr2 221210970 221211029 -29476825 + GA-rich Low_complexity Low_complexity 2 59 0 424 306 16 8 chr2 221211886 221212010 -29475844 - L2 LINE L2 0 3272 3148 378 191 32 32 chr2 221212005 221212099 -29475755 + MIR SINE MIR 113 206 -56 * 198 0 0 0 chr2 221212932 221212954 -29474900 + (A)n Simple_repeat Simple_repeat 1 22 0 1824 159 10 14 chr2 221214414 221214710 -29473144 + AluJo SINE Alu 1 295 -17 24 32 0 0 chr2 221214858 221214889 -29472965 + AT_rich Low_complexity Low_complexity 1 31 0 779 147 0 0 chr2 221215709 221215825 -29472029 + FLAM_C SINE Alu 9 124 -19 208 214 54 0 chr2 221216264 221216320 -29471534 + GA-rich Low_complexity Low_complexity 1 59 0 2177 122 0 13 chr2 221216485 221216796 -29471058 - AluSg1 SINE Alu 0 309 3 929 146 0 115 chr2 221217429 221217655 -29470199 + MER34B LTR ERV1 1 200 -365 261 0 0 0 chr2 221217679 221217708 -29470146 + (CA)n Simple_repeat Simple_repeat 2 30 0 541 125 11 0 chr2 221217898 221217986 -29469868 - LTR9 LTR ERV1 -86 526 438 935 172 0 0 chr2 221218948 221219117 -29468737 - MER2 DNA MER2_type -135 210 42 225 196 143 18 chr2 221219464 221219520 -29468334 + L2 LINE L2 3206 3268 -4 320 254 58 90 chr2 221221207 221221396 -29466458 + MER102b DNA MER1_type 149 331 -10 2014 140 0 3 chr2 221221801 221222123 -29465731 + AluSx SINE Alu 1 321 0 922 295 33 0 chr2 221222919 221223160 -29464694 + MIR SINE MIR 2 250 -12 2222 95 0 0 chr2 221224990 221225275 -29462579 - AluSx SINE Alu -27 285 1 2208 57 0 0 chr2 221225555 221225818 -29462036 - AluY SINE Alu -10 301 39 396 297 102 43 chr2 221226066 221226322 -29461532 + L1M4 LINE L1 3602 3872 -2274 680 121 0 0 chr2 221226337 221226436 -29461418 + FLAM_C SINE Alu 37 135 -8 354 270 106 51 chr2 221226438 221226712 -29461142 + L1M4 LINE L1 3890 4178 -1968 1638 151 111 0 chr2 221226839 221227163 -29460691 + MER46B DNA MER2_type 1 235 -1 246 313 31 0 chr2 221227661 221227757 -29460097 + L2 LINE L2 2544 2642 -672 528 341 36 65 chr2 221229225 221229612 -29458242 - L2 LINE L2 -345 2969 2594 740 188 133 0 chr2 221229823 221230004 -29457850 - MER3 DNA MER1_type -4 205 1 298 334 77 15 chr2 221230175 221230357 -29457497 - MIR SINE MIR -56 152 12 207 186 0 0 chr2 221230510 221230553 -29457301 + (CA)n Simple_repeat Simple_repeat 2 44 0 1091 215 109 34 chr2 221231357 221231603 -29456251 + MER2 DNA MER2_type 1 278 -67 2703 113 2 5 chr2 221231603 221232012 -29455842 - L1PA14 LINE L1 -3 6158 5751 1091 215 109 34 chr2 221232012 221232086 -29455768 + MER2 DNA MER2_type 278 345 0 2366 165 31 12 chr2 221233393 221233817 -29454037 - LTR24 LTR ERV1 -35 432 1 298 274 53 35 chr2 221234871 221234984 -29452870 - L2 LINE L2 -240 3032 2918 1003 256 70 48 chr2 221235424 221235458 -29452396 - MER34B LTR ERV1 -3 539 507 2020 122 10 14 chr2 221235458 221235753 -29452101 - AluSx SINE Alu -18 294 1 1003 256 70 48 chr2 221235753 221236243 -29451611 - MER34B LTR ERV1 -35 507 1 2042 175 88 8 chr2 221236406 221236806 -29451048 - MSTB1 LTR MaLR 0 432 1 6929 221 81 3 chr2 221236807 221237320 -29450534 - MSTB1-int LTR MaLR 0 1651 1179 3448 55 0 9 chr2 221237320 221237772 -29450082 - LTR7 LTR ERV1 -2 448 1 6929 221 81 3 chr2 221237772 221238785 -29449069 - MSTB1-int LTR MaLR -472 1179 6 1979 185 81 17 chr2 221238790 221239196 -29448658 - MSTB1 LTR MaLR 0 432 1 1575 188 29 23 chr2 221239378 221239472 -29448382 + AluJo SINE Alu 1 93 -219 1789 147 147 21 chr2 221239472 221239852 -29448002 + MSTA LTR MaLR 1 428 0 1575 188 29 23 chr2 221239852 221240092 -29447762 + AluJo SINE Alu 93 312 0 1339 222 23 86 chr2 221240257 221240744 -29447110 + MER39 LTR ERV1 250 705 -2 257 344 10 0 chr2 221240790 221240886 -29446968 - MIR SINE MIR -20 242 146 21 36 0 0 chr2 221241485 221241513 -29446341 + AT_rich Low_complexity Low_complexity 1 28 0 2191 263 35 18 chr2 221241740 221242405 -29445449 + L2 LINE L2 1902 2577 -737 833 177 181 51 chr2 221242408 221242554 -29445300 - MER93a LTR ERV1 0 402 276 2158 121 0 0 chr2 221242554 221242851 -29445003 + AluSc SINE Alu 2 298 -11 833 177 181 51 chr2 221242851 221242941 -29444913 - MER93a LTR ERV1 -126 276 106 211 146 0 24 chr2 221242957 221242998 -29444856 + (TA)n Simple_repeat Simple_repeat 1 40 0 643 279 28 19 chr2 221243026 221243241 -29444613 - MERVL LTR ERVL -3637 2127 1911 648 152 120 0 chr2 221243248 221243373 -29444481 - MER93b LTR ERV1 -227 146 7 335 296 11 0 chr2 221243375 221243463 -29444391 + L2 LINE L2 2570 2658 -656 821 250 52 24 chr2 221243467 221243719 -29444135 - LTR16C LTR ERVL -2 489 231 479 250 64 6 chr2 221243726 221243882 -29443972 - MERVL LTR ERVL -2471 3014 2850 1141 138 11 16 chr2 221244466 221244683 -29443171 - AluSq SINE Alu 0 313 112 2181 329 55 31 chr2 221244683 221246221 -29441633 - MERVL LTR ERVL -2886 2878 1192 314 325 70 32 chr2 221246294 221246463 -29441391 - MERVL LTR ERVL -3908 1088 927 561 99 0 0 chr2 221246463 221246544 -29441310 + (TA)n Simple_repeat Simple_repeat 2 82 0 314 325 70 32 chr2 221246544 221246719 -29441135 - MERVL LTR ERVL -4069 927 731 2349 95 3 0 chr2 221247849 221248153 -29439701 + AluSx SINE Alu 1 305 -7 27 49 0 0 chr2 221249793 221249834 -29438020 + AT_rich Low_complexity Low_complexity 1 41 0 2256 116 0 0 chr2 221249837 221250131 -29437723 + AluSg SINE Alu 1 294 -16 1172 169 64 21 chr2 221250402 221250638 -29437216 - AluJo SINE Alu -58 254 9 12887 137 87 5 chr2 221251862 221254097 -29433757 - Tigger1 DNA MER2_type 0 2418 1 267 314 178 8 chr2 221254948 221255066 -29432788 - L2 LINE L2 -579 2735 2598 1576 250 134 16 chr2 221255071 221255615 -29432239 + MLT1E2 LTR MaLR 19 626 0 2030 122 11 0 chr2 221256306 221256585 -29431269 + AluSx SINE Alu 1 282 -30 28 0 0 0 chr2 221256612 221256640 -29431214 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 221256739 221256774 -29431080 + AT_rich Low_complexity Low_complexity 1 35 0 528 281 7 14 chr2 221257053 221257192 -29430662 + MER58B DNA MER1_type 204 341 0 1365 196 134 7 chr2 221257584 221257890 -29429964 + MER2 DNA MER2_type 1 345 0 306 208 130 0 chr2 221260056 221260133 -29427721 - L2 LINE L2 0 3313 3227 855 206 96 70 chr2 221260152 221260496 -29427358 + L1ME3A LINE L1 4390 4742 -1404 569 228 76 43 chr2 221260620 221260804 -29427050 + L1ME3A LINE L1 5861 6050 -120 37 69 0 0 chr2 221260846 221260918 -29426936 + AT_rich Low_complexity Low_complexity 1 72 0 364 309 0 0 chr2 221261057 221261154 -29426700 - L2 LINE L2 -239 3074 2978 402 343 71 0 chr2 221261163 221261332 -29426522 - L2 LINE L2 -581 2733 2553 1140 252 0 0 chr2 221261419 221261657 -29426197 + MER8 DNA MER2_type 2 239 0 2517 76 0 0 chr2 221261727 221262055 -29425799 + L1PA8 LINE L1 5768 6095 -77 6906 50 16 1 chr2 221262055 221263424 -29424430 + L1PA7 LINE L1 4787 6154 0 302 192 71 30 chr2 221263558 221263657 -29424197 + MER34 LTR ERV1 433 535 -7 192 206 15 103 chr2 221263816 221263884 -29423970 + L2 LINE L2 3207 3268 -4 239 342 36 36 chr2 221263930 221264041 -29423813 - MIR3 SINE MIR -6 202 92 188 65 0 32 chr2 221264107 221264138 -29423716 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 218 136 23 0 chr2 221264307 221264351 -29423503 + GA-rich Low_complexity Low_complexity 2 46 0 22 0 0 0 chr2 221265460 221265482 -29422372 + AT_rich Low_complexity Low_complexity 1 22 0 211 284 119 0 chr2 221267067 221267134 -29420720 - MIR3 SINE MIR -5 203 129 25 0 0 28 chr2 221267614 221267636 -29420218 + AT_rich Low_complexity Low_complexity 1 23 -12 1569 154 3 66 chr2 221267636 221267954 -29419900 + AluJo SINE Alu 1 298 -14 25 0 0 28 chr2 221267954 221267967 -29419887 + AT_rich Low_complexity Low_complexity 23 35 0 220 220 60 20 chr2 221268112 221268162 -29419692 + MIR3 SINE MIR 114 165 -43 1895 163 150 25 chr2 221268637 221269043 -29418811 + MLT1C LTR MaLR 11 467 0 541 269 23 51 chr2 221270235 221270410 -29417444 + MIR3 SINE MIR 16 185 -23 460 169 105 40 chr2 221270433 221270557 -29417297 + FLAM_A SINE Alu 2 133 0 28 0 0 0 chr2 221270836 221270864 -29416990 + AT_rich Low_complexity Low_complexity 1 28 0 237 219 0 0 chr2 221271757 221271798 -29416056 - MIR3 SINE MIR -18 190 150 236 250 29 0 chr2 221271985 221272053 -29415801 - MIR3 SINE MIR -46 162 93 2189 179 137 21 chr2 221272154 221272359 -29415495 + Charlie1 DNA MER1_type 2070 2250 -511 1881 151 7 10 chr2 221272359 221272664 -29415190 + AluJo SINE Alu 1 304 -8 2189 179 137 21 chr2 221272664 221273078 -29414776 + Charlie1 DNA MER1_type 2250 2761 0 976 309 117 43 chr2 221273536 221274280 -29413574 - L2 LINE L2 -225 3088 2292 1997 162 89 25 chr2 221274657 221275096 -29412758 + MLT1C LTR MaLR 1 467 0 282 219 123 0 chr2 221275216 221275289 -29412565 + MIR SINE MIR 64 145 -63 582 223 8 15 chr2 221275904 221276034 -29411820 + MER94 DNA DNA 1 129 -5 231 114 0 0 chr2 221277154 221277189 -29410665 + (A)n Simple_repeat Simple_repeat 1 35 0 1934 152 7 0 chr2 221277228 221277524 -29410330 + AluSx SINE Alu 3 300 -12 1125 147 0 21 chr2 221277527 221277717 -29410137 + AluSg/x SINE Alu 118 303 -7 232 304 249 23 chr2 221278032 221278509 -29409345 + L2 LINE L2 1627 2211 -1103 987 182 0 0 chr2 221278789 221278948 -29408906 + FAM SINE Alu 9 167 -18 246 247 11 79 chr2 221278977 221279066 -29408788 + L1MC/D LINE L1 5583 5665 -2143 353 236 24 108 chr2 221279069 221279281 -29408573 + HAL1 LINE L1 1404 1597 -910 344 260 94 43 chr2 221279319 221279554 -29408300 + HAL1 LINE L1 2256 2502 -5 338 235 12 0 chr2 221279587 221279668 -29408186 + L1MC/D LINE L1 5697 5778 -2030 1083 174 55 10 chr2 221280252 221280453 -29407401 - AluJo SINE Alu -16 296 87 2038 73 84 31 chr2 221280972 221281259 -29406595 - AluY SINE Alu -9 302 1 21 57 0 0 chr2 221281533 221281568 -29406286 + AT_rich Low_complexity Low_complexity 1 35 0 758 209 92 25 chr2 221282231 221282427 -29405427 - MER63A DNA MER1_type -1 209 1 235 230 140 50 chr2 221282490 221282590 -29405264 + MIR SINE MIR 56 164 -98 2466 200 63 4 chr2 221282732 221282774 -29405080 - MLT2B1 LTR ERVL 0 520 482 414 39 0 0 chr2 221282774 221282826 -29405028 + (TA)n Simple_repeat Simple_repeat 2 53 0 2466 200 63 4 chr2 221282826 221283274 -29404580 - MLT2B1 LTR ERVL -38 482 1 2174 83 4 4 chr2 221284254 221284530 -29403324 - AluY SINE Alu -10 301 26 1289 213 79 19 chr2 221284549 221284864 -29402990 + MLT1A1 LTR MaLR 15 348 -17 1553 181 130 8 chr2 221285283 221285636 -29402218 - MSTD LTR MaLR 0 396 1 304 343 75 7 chr2 221286219 221286410 -29401444 + MIR SINE MIR 18 220 -42 23 86 0 0 chr2 221286885 221286943 -29400911 + AT_rich Low_complexity Low_complexity 1 58 0 1305 76 0 12 chr2 221287731 221287902 -29399952 - AluY SINE Alu -11 300 132 418 201 0 119 chr2 221287922 221288056 -29399798 - MER34B LTR ERV1 -440 125 8 2743 121 28 17 chr2 221288236 221288698 -29399156 + MER50 LTR ERV1 12 478 -256 512 260 83 21 chr2 221288867 221289059 -29398795 - HAL1 LINE L1 -804 1703 1500 341 305 77 62 chr2 221289182 221289305 -29398549 - HAL1 LINE L1 -1002 1505 1385 2205 111 10 7 chr2 221289305 221289612 -29398242 - AluSx SINE Alu -4 308 1 341 305 77 62 chr2 221289612 221289747 -29398107 - HAL1 LINE L1 -1122 1385 1243 1751 170 14 0 chr2 221291114 221291391 -29396463 - AluJb SINE Alu -31 281 1 245 212 30 0 chr2 221291549 221291615 -29396239 - L1ME4a LINE L1 -76 6045 5978 738 162 54 7 chr2 221291806 221291954 -29395900 + L1MA3 LINE L1 9 163 -7402 204 40 0 0 chr2 221291983 221292008 -29395846 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 5632 162 9 5 chr2 221292008 221293978 -29393876 - L1PB1 LINE L1 -7 6144 4171 4617 169 8 1 chr2 221293977 221294854 -29393000 + L1MA3 LINE L1 4910 5792 -1773 * 6221 106 21 11 chr2 221294855 221295879 -29391975 + L1MA3 LINE L1 6690 7724 0 582 310 11 0 chr2 221296413 221296587 -29391267 + LTR16A LTR ERVL 52 227 -223 2517 208 27 39 chr2 221296593 221297214 -29390640 + MLT1E3 LTR MaLR 7 620 -4 809 256 117 7 chr2 221297240 221297513 -29390341 + HERV16 LTR ERVL 872 1174 -3822 * 1042 262 43 29 chr2 221297512 221297733 -29390121 + HERV16 LTR ERVL 2222 2452 -2544 1984 115 3 14 chr2 221297733 221298046 -29389808 + AluSx SINE Alu 1 310 0 1042 262 43 29 chr2 221298046 221298174 -29389680 + HERV16 LTR ERVL 2452 2577 -2419 313 127 0 32 chr2 221298174 221298237 -29389617 + LTR49 LTR ERV1 459 519 -76 365 272 54 14 chr2 221298259 221298406 -29389448 + HERV16 LTR ERVL 2573 2725 -2271 937 332 87 44 chr2 221298735 221299463 -29388391 + HERV16 LTR ERVL 3941 4729 -756 890 169 4 146 chr2 221299463 221299717 -29388137 + MER20 DNA MER1_type 2 219 0 937 332 87 44 chr2 221299717 221300029 -29387825 + HERV16 LTR ERVL 4729 5026 -459 366 316 19 0 chr2 221300237 221300395 -29387459 + HERV16 LTR ERVL 5175 5335 -319 1077 280 54 51 chr2 221300537 221300789 -29387065 + LTR16A LTR ERVL 16 271 -179 1318 202 40 56 chr2 221300789 221301091 -29386763 + AluJo SINE Alu 1 297 -15 1077 280 54 51 chr2 221301091 221301267 -29386587 + LTR16A LTR ERVL 271 445 -5 419 309 109 26 chr2 221301281 221301511 -29386343 - L2 LINE L2 -726 2588 2340 285 197 53 0 chr2 221301559 221301635 -29386219 - MER116 DNA Mariner 0 80 1 808 124 0 65 chr2 221302469 221302622 -29385232 - L1PA16 LINE L1 -1 6165 6023 7535 31 13 0 chr2 221302640 221303618 -29384236 - L1PA5 LINE L1 -3 6151 5171 491 223 23 15 chr2 221303732 221303862 -29383992 - MLT1I LTR MaLR 0 409 279 429 255 127 61 chr2 221303960 221304172 -29383682 - MLT1I LTR MaLR -176 233 8 1974 87 16 0 chr2 221304200 221304454 -29383400 - AluSg SINE Alu -3 307 50 1776 175 3 16 chr2 221304625 221304939 -29382915 - AluJb SINE Alu -2 310 1 713 252 74 31 chr2 221305163 221305580 -29382274 - L1M4 LINE L1 -5117 1517 1042 1627 181 32 18 chr2 221305599 221305911 -29381943 - AluJb SINE Alu 0 316 1 3842 102 35 8 chr2 221305965 221306561 -29381293 - L1PB2 LINE L1 0 6151 5540 1557 163 111 18 chr2 221306619 221306951 -29380903 - MLT2D LTR ERVL -51 363 1 375 186 0 0 chr2 221306951 221307021 -29380833 - ERVL-D LTR ERVL -7 5757 5688 659 123 37 37 chr2 221307066 221307228 -29380626 - ERVL-D LTR ERVL -184 5580 5419 874 282 92 41 chr2 221307323 221307735 -29380119 - LTR33 LTR ERVL -3 518 86 529 194 121 55 chr2 221307752 221307917 -29379937 + MER58A DNA MER1_type 45 220 -4 453 230 10 0 chr2 221307915 221308015 -29379839 - LTR33 LTR ERVL -420 101 1 * 906 287 18 18 chr2 221308033 221308364 -29379490 - L1MC/D LINE L1 -2144 5664 5334 1481 266 80 11 chr2 221308377 221309013 -29378841 - L1ME3 LINE L1 0 6162 5483 180 77 0 0 chr2 221309211 221309237 -29378617 + (TCTA)n Simple_repeat Simple_repeat 1 26 0 544 204 40 58 chr2 221309307 221309550 -29378304 - MLT1E1 LTR MaLR -228 426 96 497 178 0 0 chr2 221309526 221309616 -29378238 - MLT1E LTR MaLR -446 147 58 * 1644 332 75 22 chr2 221309875 221310975 -29376879 + ERVL LTR ERVL 1906 3064 -2700 369 279 0 0 chr2 221311453 221311557 -29376297 + MLT1E-int LTR MaLR 759 862 -509 371 310 22 88 chr2 221311579 221311898 -29375956 + MLT1E-int LTR MaLR 1074 1371 0 1155 275 106 29 chr2 221311932 221312086 -29375768 + MLT1E LTR MaLR 34 175 -418 3851 104 39 12 chr2 221312086 221312672 -29375182 - LTR43 LTR ERV1 0 602 1 1155 275 106 29 chr2 221312672 221313037 -29374817 + MLT1E LTR MaLR 175 593 0 197 153 34 68 chr2 221313059 221313118 -29374736 - MIR3 SINE MIR -41 167 111 269 226 16 0 chr2 221313234 221313296 -29374558 - MIR3 SINE MIR -23 185 123 1397 236 36 13 chr2 221313296 221313681 -29374173 + MARNA DNA Mariner 148 541 -45 326 244 74 22 chr2 221314074 221314209 -29373645 + MER117 DNA MER1_type 4 145 -52 1781 75 0 56 chr2 221314473 221314725 -29373129 + AluY SINE Alu 53 290 -21 1329 14 0 0 chr2 221315673 221315820 -29372034 - AluYb8 SINE Alu -16 302 156 291 183 0 17 chr2 221317795 221317855 -29369999 + MER69 DNA AcHobo 2 60 -2466 437 189 115 46 chr2 221317870 221318087 -29369767 - MER69 DNA AcHobo -798 1728 1497 233 114 0 0 chr2 221318264 221318299 -29369555 - MLT2B3 LTR ERVL 0 554 520 * 368 119 0 0 chr2 221318295 221318354 -29369500 - MLT2B3 LTR ERVL -495 59 1 2319 58 0 52 chr2 221318402 221318712 -29369142 + AluY SINE Alu 2 295 -16 2097 130 3 3 chr2 221319504 221319811 -29368043 + AluSq SINE Alu 1 307 -6 347 256 48 114 chr2 221320112 221320339 -29367515 + MER102a DNA MER1_type 87 298 -32 1712 174 7 10 chr2 221320501 221320794 -29367060 + AluJb SINE Alu 1 292 -20 396 202 26 18 chr2 221321331 221321445 -29366409 - MLT1G1 LTR MaLR -1 594 480 324 305 154 5 chr2 221321502 221321753 -29366101 - MLT1G1 LTR MaLR -286 304 2 2472 93 0 0 chr2 221322022 221322334 -29365520 - AluSq SINE Alu -1 312 1 754 277 53 5 chr2 221323525 221323731 -29364123 - MIR SINE MIR -34 228 13 1178 98 6 0 chr2 221323864 221324038 -29363816 + L1PA11 LINE L1 6000 6174 0 5413 123 19 48 chr2 221324265 221325240 -29362614 - HSMAR2 DNA Mariner -13 1289 343 2180 137 0 0 chr2 221325241 221325548 -29362306 - AluSx SINE Alu -5 307 1 233 139 0 0 chr2 221325553 221325596 -29362258 - HSMAR2 DNA Mariner -1256 46 4 437 318 60 0 chr2 221326185 221326336 -29361518 + MER5B DNA MER1_type 17 176 -2 821 172 38 0 chr2 221326384 221326541 -29361313 + MER58B DNA MER1_type 171 333 -8 2437 89 3 9 chr2 221326541 221326856 -29360998 + AluSp SINE Alu 1 313 0 888 232 18 23 chr2 221326993 221327213 -29360641 - MLT1J LTR MaLR -292 219 1 236 215 63 0 chr2 221327509 221327588 -29360266 + MER94 DNA DNA 3 86 -48 2693 192 186 4 chr2 221328236 221328945 -29358909 - MER45B DNA AcHobo -7 1033 196 1858 208 64 4 chr2 221328945 221329417 -29358437 - L1ME1 LINE L1 -260 5906 5407 214 271 0 57 chr2 221329451 221329521 -29358333 + L2 LINE L2 3126 3191 -81 24 0 0 0 chr2 221329554 221329578 -29358276 + AT_rich Low_complexity Low_complexity 1 24 0 238 326 139 0 chr2 221329744 221329830 -29358024 + L2 LINE L2 3175 3272 0 2021 111 40 10 chr2 221331399 221331696 -29356158 + AluSq SINE Alu 7 312 -1 254 158 18 0 chr2 221331696 221331742 -29356112 + A-rich Low_complexity Low_complexity 13 62 0 585 308 75 24 chr2 221332359 221332651 -29355203 - MLT1L LTR MaLR -109 506 200 2186 98 3 14 chr2 221334146 221334442 -29353412 + AluSg SINE Alu 1 293 -17 1119 183 48 0 chr2 221334571 221334801 -29353053 + L1MA7 LINE L1 6044 6284 -7 415 293 63 58 chr2 221335147 221335352 -29352502 - L2 LINE L2 -6 3307 3102 352 205 21 196 chr2 221335703 221336034 -29351820 - LTR38B LTR ERV1 -328 282 10 347 309 55 22 chr2 221336158 221336339 -29351515 - Charlie8 DNA MER1_type -2141 276 90 21 36 0 0 chr2 221337438 221337466 -29350388 + AT_rich Low_complexity Low_complexity 1 28 0 2838 7 0 0 chr2 221337536 221337841 -29350013 + AluYa5 SINE Alu 1 305 -6 1582 104 72 25 chr2 221338823 221339101 -29348753 - THE1C LTR MaLR 0 375 85 359 251 42 87 chr2 221339464 221339505 -29348349 - MER97c DNA MER1_type? 0 1090 1049 872 236 6 0 chr2 221339505 221339679 -29348175 - FAM SINE Alu 0 175 1 359 251 42 87 chr2 221339679 221339971 -29347883 - MER97c DNA MER1_type? -41 1049 772 1597 199 51 122 chr2 221340281 221340402 -29347452 - MER97a DNA MER1_type? -291 603 475 1593 168 4 22 chr2 221340402 221340676 -29347178 + AluJo SINE Alu 6 274 -38 1597 199 51 122 chr2 221340676 221340691 -29347163 - MER97a DNA MER1_type? -419 475 461 208 53 53 0 chr2 221340691 221340729 -29347125 + A-rich Low_complexity Low_complexity 5 44 0 1597 199 51 122 chr2 221340729 221341085 -29346769 - MER97a DNA MER1_type? -433 461 164 2268 115 73 3 chr2 221341085 221341425 -29346429 - THE1B LTR MaLR 0 364 1 1597 199 51 122 chr2 221341425 221341577 -29346277 - MER97a DNA MER1_type? -730 164 3 22 0 0 0 chr2 221342245 221342267 -29345587 + AT_rich Low_complexity Low_complexity 1 22 0 704 230 35 23 chr2 221343128 221343302 -29344552 + MER5B DNA MER1_type 3 178 0 211 241 0 35 chr2 221343433 221343491 -29344363 + (TTCA)n Simple_repeat Simple_repeat 3 58 0 591 238 77 18 chr2 221343933 221344101 -29343753 - MIR SINE MIR 0 262 85 2089 138 30 28 chr2 221344101 221344464 -29343390 - THE1B LTR MaLR 0 364 1 2155 110 0 3 chr2 221344612 221344904 -29342950 - AluSx SINE Alu -21 291 1 293 312 44 58 chr2 221345016 221345192 -29342662 + MER5A DNA MER1_type 6 189 0 1721 285 156 21 chr2 221346928 221347785 -29340069 + L2 LINE L2 1728 2700 -614 519 314 40 87 chr2 221347857 221348204 -29339650 - MLT1K LTR MaLR -171 417 87 2055 133 0 58 chr2 221348230 221348560 -29339294 + AluSx SINE Alu 1 311 -1 278 226 194 11 chr2 221348639 221348732 -29339122 + MIR SINE MIR 98 207 -55 4709 184 48 44 chr2 221348892 221349173 -29338681 + L1MB3 LINE L1 4096 4374 -1809 2000 138 50 0 chr2 221349173 221349471 -29338383 + AluSq SINE Alu 1 313 0 4709 184 48 44 chr2 221349471 221349508 -29338346 + L1MB3 LINE L1 4374 4409 -1774 1601 254 17 8 chr2 221349508 221349870 -29337984 + MLT1A1 LTR MaLR 1 365 0 4709 184 48 44 chr2 221349870 221350825 -29337029 + L1MB3 LINE L1 4409 5392 -791 2258 105 0 6 chr2 221350825 221351138 -29336716 + AluY SINE Alu 1 311 0 4709 184 48 44 chr2 221351138 221351929 -29335925 + L1MB3 LINE L1 5392 6179 -4 1818 219 107 52 chr2 221352141 221352702 -29335152 - MLT1E LTR MaLR -1 592 1 9385 136 15 22 chr2 221353667 221356221 -29331633 - L1MA3 LINE L1 0 6305 3758 3103 102 9 0 chr2 221356221 221356651 -29331203 + MER57B LTR ERV1 1 434 0 9385 136 15 22 chr2 221356651 221356736 -29331118 - L1MA3 LINE L1 -2547 3758 3674 1701 188 6 13 chr2 221358007 221358321 -29329533 - AluJo SINE Alu 0 312 1 2298 112 0 0 chr2 221358446 221358749 -29329105 + AluSg SINE Alu 1 303 -7 342 367 46 68 chr2 221358991 221359536 -29328318 - L2 LINE L2 -14 3258 2716 1478 213 0 30 chr2 221359771 221360076 -29327778 - AluJb SINE Alu -16 296 1 1929 153 0 7 chr2 221360210 221360543 -29327311 + AluJo SINE Alu 1 331 0 281 266 91 91 chr2 221360994 221361148 -29326706 - L2 LINE L2 0 3313 3160 417 293 18 29 chr2 221362061 221362286 -29325568 - L2 LINE L2 -278 2994 2770 219 394 84 32 chr2 221365483 221365732 -29322122 + L2 LINE L2 2368 2629 -685 1740 185 0 7 chr2 221366299 221366591 -29321263 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr2 221366683 221366705 -29321149 + AT_rich Low_complexity Low_complexity 1 22 0 185 302 0 0 chr2 221366782 221366825 -29321029 - MIR SINE MIR -71 191 149 1068 227 55 0 chr2 221366825 221367045 -29320809 + Tigger7 DNA MER2_type 2 233 -472 609 217 0 0 chr2 221367047 221367153 -29320701 + Tigger7 DNA MER2_type 2382 2487 0 242 250 62 0 chr2 221367153 221367217 -29320637 - MIR SINE MIR -114 148 81 2318 101 3 0 chr2 221367974 221368282 -29319572 - AluSx SINE Alu -3 309 1 23181 80 9 8 chr2 221368740 221372855 -29314999 - L1PA7 LINE L1 0 6154 2040 21 0 0 0 chr2 221372957 221372978 -29314876 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 221373545 221373566 -29314288 + AT_rich Low_complexity Low_complexity 1 21 0 1689 154 9 38 chr2 221373914 221374232 -29313622 - AluJb SINE Alu -3 309 1 2074 132 3 6 chr2 221374916 221375227 -29312627 + AluSx SINE Alu 1 310 -2 359 202 11 0 chr2 221375616 221375710 -29312144 + (TA)n Simple_repeat Simple_repeat 2 96 0 2414 94 25 3 chr2 221376643 221377006 -29310848 + L1MA5 LINE L1 5924 6294 -6 24 0 0 0 chr2 221377012 221377036 -29310818 + AT_rich Low_complexity Low_complexity 1 24 0 320 231 0 0 chr2 221378052 221378117 -29309737 + MIR SINE MIR 189 253 -9 189 0 0 0 chr2 221380267 221380288 -29307566 + (TA)n Simple_repeat Simple_repeat 2 22 0 * 243 0 0 0 chr2 221380287 221380314 -29307540 + (CA)n Simple_repeat Simple_repeat 2 28 0 1679 119 61 64 chr2 221380881 221381225 -29306629 - MER2 DNA MER2_type 0 344 2 495 194 0 0 chr2 221381246 221381349 -29306505 + (TG)n Simple_repeat Simple_repeat 2 104 0 2027 143 7 0 chr2 221381420 221381714 -29306140 - AluSx SINE Alu -16 296 1 2162 106 21 0 chr2 221382392 221382675 -29305179 + AluSx SINE Alu 3 291 -21 586 122 14 2 chr2 221382710 221382809 -29305045 - L1MB1 LINE L1 -2 6169 6064 2500 69 0 0 chr2 221383120 221383425 -29304429 - AluSx SINE Alu -2 310 6 181 376 78 40 chr2 221383455 221383777 -29304077 + L2 LINE L2 2579 2912 -402 659 294 42 21 chr2 221383987 221384320 -29303534 - L1MC4a LINE L1 -1869 5939 5600 1717 157 69 4 chr2 221386309 221386583 -29301271 + AluJb SINE Alu 1 292 -20 185 247 65 52 chr2 221387296 221387373 -29300481 + MIR SINE MIR 185 262 0 398 314 63 19 chr2 221388834 221388993 -29298861 - MER5A DNA MER1_type -3 186 21 191 261 76 65 chr2 221391431 221391523 -29296331 + L2 LINE L2 3175 3267 -5 22 80 0 0 chr2 221391531 221391581 -29296273 + AT_rich Low_complexity Low_complexity 1 50 0 186 284 15 30 chr2 221393191 221393258 -29294596 + MIR3 SINE MIR 4 69 -139 16079 139 11 12 chr2 221393424 221394551 -29293303 + L1PA11 LINE L1 2584 3711 -2463 2058 96 7 36 chr2 221394551 221394854 -29293000 + AluSx SINE Alu 11 304 -8 16079 139 11 12 chr2 221394854 221397322 -29290532 + L1PA11 LINE L1 3711 6170 -4 183 242 48 48 chr2 221397526 221397588 -29290266 - MIR SINE MIR -109 153 92 190 206 0 0 chr2 221398185 221398219 -29289635 - MIR SINE MIR -143 65 32 204 373 10 0 chr2 221398632 221398734 -29289120 + MIR SINE MIR 154 256 -6 842 249 90 52 chr2 221399058 221399515 -29288339 - L1ME3A LINE L1 -88 6082 5609 409 186 97 26 chr2 221400526 221400639 -29287215 + L1ME4a LINE L1 5974 6094 -27 219 200 20 0 chr2 221401783 221401833 -29286021 + (TA)n Simple_repeat Simple_repeat 2 52 0 432 174 99 16 chr2 221401843 221401964 -29285890 - L1MD3 LINE L1 -4 7991 7861 1145 239 77 32 chr2 221402263 221403124 -29284730 - L1ME3A LINE L1 -14 6156 5173 1830 143 28 3 chr2 221403323 221403610 -29284244 - AluJo SINE Alu -18 294 1 1482 132 62 47 chr2 221403775 221404033 -29283821 - AluJb SINE Alu -50 262 1 306 247 165 0 chr2 221405368 221405465 -29282389 + MIR SINE MIR 92 204 -58 216 175 0 0 chr2 221405603 221405643 -29282211 + (CA)n Simple_repeat Simple_repeat 2 41 0 1748 170 3 7 chr2 221405872 221406172 -29281682 - AluSx SINE Alu -13 299 1 222 118 0 0 chr2 221408779 221408813 -29279041 + (T)n Simple_repeat Simple_repeat 1 34 0 268 298 44 53 chr2 221408822 221408936 -29278918 - L3 LINE CR1 -110 1467 1355 616 248 53 153 chr2 221410128 221410676 -29277178 + L2 LINE L2 2817 3309 -4 821 203 16 21 chr2 221411087 221411274 -29276580 + MER5A DNA MER1_type 1 186 -3 1971 113 50 13 chr2 221411725 221412026 -29275828 + AluSx SINE Alu 1 312 0 25 0 0 0 chr2 221412614 221412639 -29275215 + AT_rich Low_complexity Low_complexity 1 25 0 1470 141 3 133 chr2 221412672 221413019 -29274835 - AluJo SINE Alu 0 302 1 1034 268 42 68 chr2 221413566 221414281 -29273573 - L2 LINE L2 0 3313 2622 2441 66 3 3 chr2 221415003 221415304 -29272550 - AluY SINE Alu -10 301 1 374 352 121 25 chr2 221415328 221415814 -29272040 + L2 LINE L2 2166 2698 -616 286 200 56 33 chr2 221415877 221415967 -29271887 + L2 LINE L2 3182 3273 -40 2195 97 9 3 chr2 221416160 221416479 -29271375 + L1PA13 LINE L1 5841 6161 -2 495 345 30 9 chr2 221417049 221417281 -29270573 - Charlie8 DNA MER1_type -2124 293 57 297 246 72 0 chr2 221418308 221418377 -29269477 - tRNA-Ile-ATT tRNA tRNA -3 74 1 738 237 93 0 chr2 221419221 221419415 -29268439 - L1ME1 LINE L1 -48 6118 5907 40 40 0 26 chr2 221419777 221419805 -29268049 + AT_rich Low_complexity Low_complexity 1 28 -46 2227 92 0 0 chr2 221419805 221420088 -29267766 + AluSx SINE Alu 1 283 -29 237 65 0 0 chr2 221420088 221420119 -29267735 + (TA)n Simple_repeat Simple_repeat 2 32 0 40 40 0 26 chr2 221420119 221420165 -29267689 + AT_rich Low_complexity Low_complexity 26 74 0 207 0 0 0 chr2 221421545 221421568 -29266286 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1358 73 6 0 chr2 221422764 221422942 -29264912 + L1PA7 LINE L1 5965 6143 -11 2389 76 0 13 chr2 221423069 221423384 -29264470 + AluY SINE Alu 1 311 0 180 0 0 0 chr2 221423431 221423451 -29264403 + (T)n Simple_repeat Simple_repeat 1 20 0 1987 118 3 21 chr2 221423488 221423805 -29264049 + AluSq SINE Alu 1 312 0 457 298 38 25 chr2 221426367 221426525 -29261329 + MIR3 SINE MIR 3 162 -46 510 274 79 6 chr2 221426621 221426785 -29261069 - MER104 DNA Tc2 -3 177 2 188 340 82 31 chr2 221426865 221426962 -29260892 - MIR SINE MIR -87 121 20 1007 92 8 0 chr2 221429236 221429366 -29258488 - AluSq/x SINE Alu -182 131 1 669 253 66 0 chr2 221429546 221429712 -29258142 - MER5A DNA MER1_type -9 180 4 470 267 0 55 chr2 221430271 221430417 -29257437 + MIR SINE MIR 75 212 -50 270 255 82 20 chr2 221431229 221431327 -29256527 - MIR3 SINE MIR -24 184 81 23 33 0 0 chr2 221434550 221434580 -29253274 + AT_rich Low_complexity Low_complexity 1 30 0 2173 125 0 3 chr2 221434580 221434876 -29252978 - AluSx SINE Alu -17 295 1 21 0 0 0 chr2 221435754 221435775 -29252079 + AT_rich Low_complexity Low_complexity 1 21 0 554 278 25 35 chr2 221435951 221436149 -29251705 - MIR SINE MIR -2 260 65 463 211 8 24 chr2 221436636 221436759 -29251095 + L1PB4 LINE L1 6034 6154 -2 24 85 0 0 chr2 221437346 221437405 -29250449 + AT_rich Low_complexity Low_complexity 1 59 0 2448 85 3 0 chr2 221437776 221438083 -29249771 - AluSp SINE Alu -5 308 1 330 281 69 94 chr2 221439094 221439516 -29248338 + L1MC/D LINE L1 5500 5920 -201 4543 101 29 5 chr2 221439719 221440382 -29247472 + L1PA13 LINE L1 5482 6160 -3 275 281 0 0 chr2 221441705 221441769 -29246085 + L2 LINE L2 3208 3271 -1 506 281 22 0 chr2 221442040 221442179 -29245675 + MIR SINE MIR 3 144 -118 2426 207 51 22 chr2 221443075 221443721 -29244133 + L1MB7 LINE L1 5508 6172 -12 21 36 0 0 chr2 221443915 221443943 -29243911 + AT_rich Low_complexity Low_complexity 1 28 0 454 352 127 18 chr2 221443951 221444289 -29243565 - L2 LINE L2 -1 3271 2897 378 250 93 108 chr2 221444700 221444807 -29243047 - L2 LINE L2 -35 3278 3171 1987 156 0 0 chr2 221444807 221445102 -29242752 + AluSx SINE Alu 1 295 -17 378 250 93 108 chr2 221445102 221445262 -29242592 - L2 LINE L2 -142 3171 3015 719 282 37 51 chr2 221445332 221445626 -29242228 - L2 LINE L2 -448 2866 2577 305 254 0 14 chr2 221446201 221446272 -29241582 + MIR3 SINE MIR 121 190 -18 180 304 95 63 chr2 221446737 221446771 -29241083 - L2 LINE L2 -791 2523 2492 2350 67 0 3 chr2 221446771 221447069 -29240785 + AluSg SINE Alu 1 297 -13 180 304 95 63 chr2 221447069 221447192 -29240662 - L2 LINE L2 -822 2492 2361 2626 55 0 0 chr2 221447210 221447521 -29240333 + AluY SINE Alu 1 311 0 726 34 0 0 chr2 221448546 221448634 -29239220 - AluY SINE Alu -9 302 215 202 230 140 60 chr2 221450029 221450129 -29237725 + MIR SINE MIR 31 139 -69 23 33 0 0 chr2 221451004 221451034 -29236820 + AT_rich Low_complexity Low_complexity 1 30 0 685 85 0 28 chr2 221451093 221451199 -29236655 + L1MB2 LINE L1 5449 5551 -620 198 0 0 0 chr2 221451201 221451223 -29236631 + (CA)n Simple_repeat Simple_repeat 1 22 0 1965 127 26 45 chr2 221451226 221451603 -29236251 + L1MB2 LINE L1 5795 6164 -7 870 192 6 24 chr2 221451607 221451774 -29236080 - FRAM SINE Alu -2 164 1 1365 184 12 20 chr2 221451802 221452057 -29235797 - AluJb SINE Alu -59 253 1 21 0 0 0 chr2 221452923 221452944 -29234910 + AT_rich Low_complexity Low_complexity 1 21 0 237 265 0 0 chr2 221453451 221453500 -29234354 + L2 LINE L2 3254 3302 -11 345 247 43 21 chr2 221454021 221454114 -29233740 - L1MC4 LINE L1 -1339 6703 6609 230 264 16 11 chr2 221454334 221454413 -29233441 - MIR SINE MIR -83 125 45 2066 266 27 52 chr2 221454874 221455687 -29232167 + L1PA15-16 LINE L1 2153 2945 -3904 225 212 43 43 chr2 221455820 221455889 -29231965 - MIR3 SINE MIR -36 172 103 2286 106 3 6 chr2 221455900 221456211 -29231643 + AluSq SINE Alu 1 310 -3 600 226 24 0 chr2 221456454 221456622 -29231232 + MER96B DNA MER1_type? 44 215 -202 2290 117 0 0 chr2 221456855 221457154 -29230700 - AluSx SINE Alu -13 299 1 332 239 61 49 chr2 221457232 221457395 -29230459 - L1ME4a LINE L1 -3 6118 5954 222 128 0 0 chr2 221457403 221457442 -29230412 + (CA)n Simple_repeat Simple_repeat 1 39 0 240 279 13 25 chr2 221458100 221458179 -29229675 + MER5A DNA MER1_type 111 188 -1 33 25 0 0 chr2 221458832 221458872 -29228982 + AT_rich Low_complexity Low_complexity 1 40 0 1151 175 4 44 chr2 221459226 221459454 -29228400 + AluJb SINE Alu 77 295 -17 187 272 128 56 chr2 221459455 221459580 -29228274 - L2 LINE L2 -480 2834 2701 463 144 21 31 chr2 221459663 221459760 -29228094 - MLT1F LTR MaLR 0 542 447 1445 109 5 0 chr2 221459760 221459952 -29227902 - AluSc SINE Alu -11 298 106 5602 162 36 23 chr2 221460085 221461048 -29226806 - L1MC1 LINE L1 -25 6308 5310 2402 61 0 48 chr2 221461048 221461361 -29226493 - AluY SINE Alu -13 298 1 5602 162 36 23 chr2 221461361 221461817 -29226037 - L1MC1 LINE L1 -1023 5310 4861 549 198 27 27 chr2 221461820 221462017 -29225837 - L1MD3 LINE L1 -686 7099 6944 2361 93 0 0 chr2 221462141 221462442 -29225412 + AluSq SINE Alu 1 301 -12 2177 95 27 7 chr2 221462625 221462920 -29224934 + AluSx SINE Alu 1 301 -11 437 204 184 4 chr2 221463030 221463187 -29224667 - L1MD3 LINE L1 -491 7504 7145 265 336 0 61 chr2 221464334 221464465 -29223389 + MIR SINE MIR 64 186 -76 430 330 66 35 chr2 221464740 221465028 -29222826 + L2 LINE L2 2643 2939 -375 223 293 144 40 chr2 221465106 221465280 -29222574 + L2 LINE L2 3117 3308 -5 185 257 0 0 chr2 221466303 221466338 -29221516 - MIR SINE MIR -32 230 196 1526 116 10 0 chr2 221466417 221466624 -29221230 + AluSg/x SINE Alu 85 293 -19 2400 74 3 13 chr2 221466627 221466938 -29220916 + AluY SINE Alu 1 308 -3 412 315 79 39 chr2 221467245 221467575 -29220279 + HAL1 LINE L1 590 932 -1575 5250 215 157 15 chr2 221467665 221469479 -29218375 + L1PBa LINE L1 6 2076 -4787 326 194 0 0 chr2 221469474 221469536 -29218318 + L1 LINE L1 3344 3405 -3457 * 200 57 0 29 chr2 221469536 221469571 -29218283 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 6268 70 10 40 chr2 221469571 221471132 -29216722 - SVA Other Other -799 1363 6 3517 226 12 9 chr2 221471172 221472165 -29215689 + L1 LINE L1 3391 4386 -2476 383 342 17 0 chr2 221474022 221474142 -29213712 - L2 LINE L2 -1 3271 3150 230 328 0 134 chr2 221474918 221475150 -29212704 + L2 LINE L2 2986 3186 -86 204 304 18 0 chr2 221475287 221475343 -29212511 - L2 LINE L2 -236 3036 2980 22 0 0 0 chr2 221475783 221475805 -29212049 + AT_rich Low_complexity Low_complexity 1 22 0 803 214 19 7 chr2 221476120 221476274 -29211580 - FRAM SINE Alu -10 156 1 294 123 0 0 chr2 221476415 221476472 -29211382 + (T)n Simple_repeat Simple_repeat 1 57 0 2471 65 0 7 chr2 221477877 221478186 -29209668 + AluY SINE Alu 1 307 -4 433 148 0 34 chr2 221478374 221478462 -29209392 - MER53 DNA DNA 0 189 105 238 286 24 36 chr2 221478510 221478594 -29209260 + MIR3 SINE MIR 109 191 -17 180 111 0 0 chr2 221479626 221479653 -29208201 + (CAAGT)n Simple_repeat Simple_repeat 3 29 0 2376 55 0 33 chr2 221481127 221481434 -29206420 + AluY SINE Alu 1 297 -14 451 190 7 2 chr2 221482148 221482252 -29205602 + MLT1A2 LTR MaLR 1 106 -259 356 167 0 0 chr2 221482227 221482287 -29205567 + MLT1A2 LTR MaLR 306 365 0 * 2461 87 0 0 chr2 221484473 221484784 -29203070 + AluY SINE Alu 1 311 0 517 292 51 22 chr2 221485447 221485625 -29202229 + MIR SINE MIR 32 214 -48 2364 77 10 3 chr2 221486201 221486499 -29201355 + AluSg1 SINE Alu 1 300 -9 24 77 0 0 chr2 221486660 221486712 -29201142 + AT_rich Low_complexity Low_complexity 1 52 0 337 299 120 38 chr2 221489087 221489271 -29198583 - MIR SINE MIR -59 203 5 1534 144 85 15 chr2 221490293 221490345 -29197509 - Charlie5 DNA MER1_type -26 2598 2551 2304 80 0 0 chr2 221490345 221490662 -29197192 + AluY SINE Alu 1 317 0 1534 144 85 15 chr2 221490662 221490949 -29196905 - Charlie5 DNA MER1_type -73 2551 2234 530 184 35 0 chr2 221490951 221491065 -29196789 - Charlie5 DNA MER1_type -2489 123 6 727 222 62 68 chr2 221491132 221491396 -29196458 + L1MB1 LINE L1 5295 5556 -612 2376 95 0 9 chr2 221491398 221491713 -29196141 + AluSx SINE Alu 1 312 0 528 154 0 0 chr2 221491768 221491846 -29196008 - L1PA8 LINE L1 -31 6141 6064 854 151 52 5 chr2 221491885 221492077 -29195777 + L1MA8 LINE L1 6090 6290 -1 2472 74 0 0 chr2 221492143 221492440 -29195414 + AluSg SINE Alu 1 297 -13 2756 173 36 28 chr2 221492448 221493054 -29194800 + L1MB1 LINE L1 5557 6167 -1 1573 203 3 36 chr2 221493112 221493418 -29194436 - AluJo SINE Alu -16 296 1 2156 174 35 0 chr2 221493432 221493835 -29194019 - L1MA6 LINE L1 0 6300 5884 1894 144 3 12 chr2 221493835 221494167 -29193687 - L1M1 LINE L1 -694 5606 5276 24 0 0 0 chr2 221494268 221494292 -29193562 + AT_rich Low_complexity Low_complexity 1 24 0 216 0 0 0 chr2 221494444 221494468 -29193386 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1830 251 65 43 chr2 221494469 221495261 -29192593 - L1ME2 LINE L1 0 6178 5425 551 328 18 6 chr2 221495494 221495665 -29192189 + MIR SINE MIR 20 192 -70 203 322 240 11 chr2 221495813 221495996 -29191858 + MIR SINE MIR 23 247 -15 26 64 0 0 chr2 221497130 221497177 -29190677 + AT_rich Low_complexity Low_complexity 1 47 0 202 28 28 28 chr2 221497340 221497376 -29190478 + (TATAA)n Simple_repeat Simple_repeat 5 40 0 3206 95 11 4 chr2 221497659 221498113 -29189741 + L1PA10 LINE L1 5707 6163 -5 3279 143 8 30 chr2 221498222 221499285 -29188569 + L1PA13 LINE L1 4708 5737 -424 1957 144 3 25 chr2 221499285 221499604 -29188250 + AluSx SINE Alu 1 312 0 1549 170 55 6 chr2 221499733 221500097 -29187757 + L1PA13 LINE L1 5771 6152 -11 351 0 0 0 chr2 221502542 221502581 -29185273 + (TG)n Simple_repeat Simple_repeat 1 39 0 200 273 0 0 chr2 221502589 221502633 -29185221 + GA-rich Low_complexity Low_complexity 5 48 0 401 228 54 0 chr2 221504691 221504783 -29183071 + L2 LINE L2 3214 3310 -3 411 279 186 7 chr2 221505027 221505167 -29182687 + MIR3 SINE MIR 16 180 -28 232 225 0 0 chr2 221506077 221506117 -29181737 - L2 LINE L2 -14 3258 3219 254 270 40 14 chr2 221508141 221508215 -29179639 + MIR SINE MIR 117 192 -70 1005 146 75 42 chr2 221509099 221509311 -29178543 + MER20 DNA MER1_type 1 219 0 327 354 61 7 chr2 221511133 221511280 -29176574 + L2 LINE L2 3115 3269 -3 923 310 76 42 chr2 221513374 221513959 -29173895 + L2 LINE L2 2716 3313 0 252 211 156 22 chr2 221515340 221515430 -29172424 + L1ME LINE L1 5560 5661 -460 387 41 0 0 chr2 221515616 221515665 -29172189 + (CA)n Simple_repeat Simple_repeat 2 50 0 261 0 0 0 chr2 221516225 221516254 -29171600 + (A)n Simple_repeat Simple_repeat 1 29 0 226 217 22 0 chr2 221516283 221516329 -29171525 + GA-rich Low_complexity Low_complexity 2 48 0 1235 223 7 40 chr2 221516470 221516770 -29171084 + MLT1D LTR MaLR 208 497 -8 713 165 17 0 chr2 221517301 221517416 -29170438 + MER5A DNA MER1_type 73 189 0 1067 214 5 0 chr2 221517446 221517633 -29170221 - MER58A DNA MER1_type -36 188 1 234 359 7 11 chr2 221517692 221517864 -29169990 + CT-rich Low_complexity Low_complexity 2 269 0 193 355 16 0 chr2 221519402 221519464 -29168390 - L2 LINE L2 -3 3269 3207 2258 38 28 14 chr2 221519515 221519803 -29168051 - L1PA3 LINE L1 -2 6153 5862 1576 164 3 57 chr2 221520024 221520385 -29167469 + AluJo SINE Alu 1 345 0 251 313 76 46 chr2 221520395 221520526 -29167328 - MIR SINE MIR -41 221 87 21 0 0 0 chr2 221520527 221520548 -29167306 + AT_rich Low_complexity Low_complexity 1 21 0 188 364 93 7 chr2 221520633 221520773 -29167081 + MIR3 SINE MIR 5 156 -52 2358 98 0 0 chr2 221521941 221522247 -29165607 + AluSg SINE Alu 2 307 -3 21 36 0 0 chr2 221522441 221522469 -29165385 + AT_rich Low_complexity Low_complexity 1 28 0 465 194 62 16 chr2 221523026 221523155 -29164699 - MER103 DNA DNA -8 158 24 27 0 0 0 chr2 221523760 221523787 -29164067 + AT_rich Low_complexity Low_complexity 1 27 0 2180 95 0 3 chr2 221523787 221524106 -29163748 + AluSc SINE Alu 1 318 0 197 365 125 0 chr2 221524585 221524681 -29163173 + MIR SINE MIR 30 137 -71 21 36 0 0 chr2 221525479 221525507 -29162347 + AT_rich Low_complexity Low_complexity 1 28 0 464 279 128 35 chr2 221525569 221526062 -29161792 + L1ME3A LINE L1 5408 5957 -213 265 162 141 91 chr2 221527745 221527844 -29160010 - L2 LINE L2 0 3272 3169 1927 147 0 17 chr2 221529341 221529641 -29158213 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr2 221529717 221529740 -29158114 + AT_rich Low_complexity Low_complexity 1 23 0 2257 112 3 6 chr2 221530318 221530680 -29157174 + AluSx SINE Alu 1 361 0 2114 94 0 0 chr2 221531163 221531439 -29156415 - AluSg SINE Alu -8 302 27 1613 167 13 43 chr2 221533109 221533409 -29154445 - AluJo SINE Alu -21 291 1 2184 115 20 0 chr2 221533934 221534238 -29153616 + AluSx SINE Alu 1 310 -2 264 317 118 21 chr2 221534475 221534661 -29153193 + MIR SINE MIR 39 242 -20 198 0 0 0 chr2 221534814 221534836 -29153018 + (TTCA)n Simple_repeat Simple_repeat 2 23 0 342 0 0 0 chr2 221536042 221536080 -29151774 + (TTA)n Simple_repeat Simple_repeat 2 39 0 2047 118 4 0 chr2 221536084 221536364 -29151490 - AluSp SINE Alu -32 281 1 282 56 0 0 chr2 221536610 221536646 -29151208 + (TG)n Simple_repeat Simple_repeat 2 37 0 222 386 114 0 chr2 221536825 221536965 -29150889 - L2 LINE L2 -233 3039 2884 200 254 28 14 chr2 221538011 221538082 -29149772 + (TTCA)n Simple_repeat Simple_repeat 1 72 0 240 222 0 0 chr2 221538094 221538139 -29149715 - L2 LINE L2 -5 3308 3264 1985 97 67 8 chr2 221539053 221539421 -29148433 + LTR7 LTR ERV1 1 450 0 1985 172 94 13 chr2 221539421 221539897 -29147957 + HERVH LTR ERV1 1 515 -7198 * 18135 142 6 20 chr2 221539875 221543113 -29144741 + HERVH LTR ERV1 802 3993 -3720 3347 140 0 6 chr2 221543145 221543716 -29144138 + HERVH LTR ERV1 3955 4529 -2860 2392 178 2 7 chr2 221543716 221544172 -29143682 + HERVH LTR ERV1 6489 6942 -771 207 0 0 0 chr2 221544189 221544212 -29143642 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 3278 117 11 9 chr2 221544237 221544777 -29143077 + HERVH LTR ERV1 7173 7713 0 2008 91 93 5 chr2 221544777 221545142 -29142712 + LTR7 LTR ERV1 1 450 0 321 232 0 14 chr2 221545160 221545229 -29142625 + MIR SINE MIR 39 106 -156 367 256 218 0 chr2 221545339 221545495 -29142359 - MIR SINE MIR -70 192 3 198 271 74 49 chr2 221545495 221545596 -29142258 + MIR SINE MIR 104 207 -55 271 218 55 0 chr2 221547674 221547729 -29140125 - L2 LINE L2 0 3313 3256 266 286 51 0 chr2 221547925 221548023 -29139831 - L2 LINE L2 -10 3262 3160 1441 254 100 11 chr2 221548081 221548522 -29139332 + MLT1F1 LTR MaLR 1 480 -87 226 62 0 0 chr2 221548528 221548560 -29139294 + Alu SINE Alu 5 36 -264 187 156 0 0 chr2 221548690 221548722 -29139132 + MIR SINE MIR 111 142 -66 889 186 6 0 chr2 221548939 221549095 -29138759 + AluSq SINE Alu 133 289 -24 390 42 0 0 chr2 221550681 221550729 -29137125 + (CA)n Simple_repeat Simple_repeat 2 49 0 425 326 51 15 chr2 221550736 221550932 -29136922 - L2 LINE L2 -680 2634 2432 750 256 26 20 chr2 221551601 221551796 -29136058 + MIR SINE MIR 57 252 -10 650 246 28 0 chr2 221553551 221553693 -29134161 + MIR SINE MIR 21 166 -96 2233 80 10 3 chr2 221553890 221554179 -29133675 + AluSg1 SINE Alu 1 291 -18 2323 81 0 16 chr2 221555331 221555640 -29132214 + AluY SINE Alu 1 304 -7 2336 106 0 6 chr2 221557589 221557900 -29129954 - AluSg1 SINE Alu 0 309 1 623 211 139 36 chr2 221558504 221558670 -29129184 - MER5A DNA MER1_type 0 189 7 1809 181 22 37 chr2 221558765 221559084 -29128770 + Charlie4a DNA MER1_type 24 335 -1626 2346 93 0 0 chr2 221559084 221559375 -29128479 - AluSc SINE Alu -18 291 1 1809 181 22 37 chr2 221559375 221559513 -29128341 + Charlie4a DNA MER1_type 335 474 -34 223 329 12 24 chr2 221559558 221559640 -29128214 - MIR SINE MIR -84 124 44 22 0 0 0 chr2 221560416 221560438 -29127416 + AT_rich Low_complexity Low_complexity 1 22 0 306 271 10 23 chr2 221561112 221561241 -29126613 + L1MC4 LINE L1 6477 6603 -1205 416 266 160 27 chr2 221561285 221561473 -29126381 - L1MC4 LINE L1 -1135 6907 6695 186 103 0 0 chr2 221561540 221561569 -29126285 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 250 281 168 0 chr2 221561599 221561766 -29126088 + L1MC4 LINE L1 6913 7107 -935 819 234 140 21 chr2 221561809 221562138 -29125716 + L1MC4 LINE L1 7390 7757 -285 235 164 109 0 chr2 221562216 221562271 -29125583 + L1MC4 LINE L1 7982 8042 0 2183 118 0 13 chr2 221563226 221563532 -29124322 + AluSx SINE Alu 5 306 -6 231 167 222 0 chr2 221563740 221563794 -29124060 - L2 LINE L2 -12 3301 3236 2447 178 20 18 chr2 221563841 221564086 -29123768 - L1P LINE L1 -738 5428 5185 2113 115 17 0 chr2 221564086 221564373 -29123481 - AluSx SINE Alu -20 292 1 2447 178 20 18 chr2 221564373 221564802 -29123052 - L1P LINE L1 -981 5185 4760 3484 138 65 54 chr2 221564803 221565508 -29122346 + L1PA16 LINE L1 5449 6161 -5 630 284 258 9 chr2 221565772 221566117 -29121737 - L3 LINE CR1 -85 1492 1062 412 299 170 22 chr2 221566117 221566341 -29121513 - MIR SINE MIR -1 261 5 190 290 0 16 chr2 221566361 221566423 -29121431 - L3 LINE CR1 -542 1035 975 2743 94 6 3 chr2 221566729 221567092 -29120762 + THE1B LTR MaLR 1 364 0 2895 177 61 17 chr2 221567911 221568264 -29119590 - L1PB4 LINE L1 -16 6140 5745 2165 120 13 0 chr2 221568264 221568572 -29119282 - AluSq SINE Alu 0 313 2 2895 177 61 17 chr2 221568572 221568855 -29118999 - L1PB4 LINE L1 -411 5745 5476 13926 198 15 8 chr2 221568882 221574449 -29113405 - L1PB2 LINE L1 0 6867 105 12579 214 21 22 chr2 221574501 221578551 -29109303 - L1P5 LINE L1 -672 6187 2164 353 242 0 22 chr2 221578980 221579071 -29108783 + L1MC4 LINE L1 6615 6703 -1339 331 311 0 0 chr2 221579011 221579101 -29108753 - L1MC4 LINE L1 -1339 6703 6614 * 321 276 23 0 chr2 221579094 221579181 -29108673 + L1MC4 LINE L1 6615 6703 -1339 * 237 143 16 32 chr2 221579183 221579246 -29108608 + L1MCa LINE L1 2007 2068 -4358 279 190 0 0 chr2 221579246 221579304 -29108550 + (TA)n Simple_repeat Simple_repeat 1 58 0 195 69 0 0 chr2 221579340 221579369 -29108485 + (GA)n Simple_repeat Simple_repeat 2 30 0 1620 181 25 4 chr2 221579393 221579669 -29108185 - AluJb SINE Alu -30 282 1 2032 123 31 7 chr2 221579693 221579986 -29107868 - AluSq SINE Alu -13 300 1 183 308 46 0 chr2 221581742 221581807 -29106047 - L2 LINE L2 -1874 1440 1373 2148 95 3 17 chr2 221584290 221584584 -29103270 + AluSq SINE Alu 2 291 -22 329 288 98 76 chr2 221584659 221584843 -29103011 - MIR SINE MIR -69 193 6 315 287 110 15 chr2 221585918 221586054 -29101800 - MIR SINE MIR -92 170 22 2008 118 0 0 chr2 221587262 221587532 -29100322 - AluSg SINE Alu -1 309 40 2263 121 0 3 chr2 221587674 221587987 -29099867 - AluSx SINE Alu 0 312 1 250 24 0 49 chr2 221589419 221589460 -29098394 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2227 101 0 0 chr2 221589496 221589783 -29098071 - AluSq SINE Alu -10 303 17 2362 64 0 0 chr2 221590836 221591146 -29096708 - AluY SINE Alu 0 310 1 1345 193 58 51 chr2 221591574 221591968 -29095886 + MLT2C1 LTR ERVL 1 397 0 1007 96 45 0 chr2 221592558 221592714 -29095140 - L1MA3 LINE L1 0 6305 6143 2462 67 0 0 chr2 221592912 221593209 -29094645 + AluY SINE Alu 1 297 -14 4820 144 41 5 chr2 221594231 221595092 -29092762 - MER49 LTR ERV1 0 923 9 1362 259 87 5 chr2 221595243 221595622 -29092232 + MLT1F LTR MaLR 2 411 -131 5881 89 1 8 chr2 221595663 221596565 -29091289 - L1P LINE L1 -962 5184 4289 2376 218 68 45 chr2 221597116 221597922 -29089932 - L1MC4a LINE L1 -2 7806 6982 255 250 60 12 chr2 221648583 221648667 -29039187 + MIR SINE MIR 60 147 -115 642 322 33 20 chr2 221648699 221648944 -29038910 + MIR SINE MIR 15 262 0 892 179 35 57 chr2 221649161 221649390 -29038464 - L1MB7 LINE L1 -16 6168 5945 316 331 95 16 chr2 221650100 221650405 -29037449 + L1MDa LINE L1 1239 1567 -4973 305 268 131 50 chr2 221650412 221650539 -29037315 + HAL1 LINE L1 1309 1424 -1083 1960 119 0 27 chr2 221650539 221650833 -29037021 + AluSx SINE Alu 6 291 -21 305 268 131 50 chr2 221650833 221651002 -29036852 + HAL1 LINE L1 1424 1640 -867 2150 122 0 0 chr2 221651002 221651314 -29036540 + AluSq SINE Alu 1 312 0 305 268 131 50 chr2 221651314 221651358 -29036496 + HAL1 LINE L1 1640 1679 -828 198 0 0 0 chr2 221654077 221654099 -29033755 + (T)n Simple_repeat Simple_repeat 1 22 0 188 222 0 0 chr2 221655283 221655319 -29032535 + L2 LINE L2 3225 3260 -12 2082 116 3 17 chr2 221655350 221655652 -29032202 - AluSx SINE Alu -14 298 1 669 151 206 7 chr2 221655662 221655808 -29032046 - MLT1D LTR MaLR -10 495 321 654 230 0 0 chr2 221655923 221656049 -29031805 - Charlie1 DNA MER1_type 0 2761 2636 967 209 95 5 chr2 221656057 221656267 -29031587 - Charlie1 DNA MER1_type -2532 229 1 680 228 120 8 chr2 221656954 221657195 -29030659 + MER5C DNA MER1_type 1 268 -56 1840 140 14 7 chr2 221657409 221657687 -29030167 + AluSx SINE Alu 1 280 -32 348 127 0 0 chr2 221657705 221657760 -29030094 + (CA)n Simple_repeat Simple_repeat 2 56 0 1004 201 0 0 chr2 221657763 221657927 -29029927 + FRAM SINE Alu 1 161 -15 367 254 121 36 chr2 221658851 221659007 -29028847 - L1ME4a LINE L1 0 6121 5939 2527 78 0 0 chr2 221659007 221659314 -29028540 - AluY SINE Alu -4 307 1 367 254 121 36 chr2 221659314 221659381 -29028473 - L1ME4a LINE L1 -182 5939 5879 250 244 87 55 chr2 221660250 221660377 -29027477 - L1MC5 LINE L1 -46 7915 7785 599 231 26 39 chr2 221660585 221660729 -29027125 - MIR SINE MIR -52 210 67 2181 86 35 7 chr2 221660729 221661019 -29026835 - AluSq SINE Alu -12 301 4 599 231 26 39 chr2 221661019 221661030 -29026824 - MIR SINE MIR -195 67 57 2856 176 63 44 chr2 221661031 221661601 -29026253 - MER39 LTR ERV1 0 707 150 1626 178 21 4 chr2 221661601 221661882 -29025972 - AluJb SINE Alu -24 288 3 2856 176 63 44 chr2 221661882 221661898 -29025956 - MER39 LTR ERV1 -557 150 136 2219 106 0 13 chr2 221661898 221662199 -29025655 + AluSx SINE Alu 1 297 -15 2856 176 63 44 chr2 221662199 221662226 -29025628 - MER39 LTR ERV1 -571 136 81 661 186 124 23 chr2 221662681 221662810 -29025044 + FAM SINE Alu 23 164 -21 2238 109 3 3 chr2 221662982 221663293 -29024561 - AluSq SINE Alu -2 311 1 2105 103 0 10 chr2 221663728 221664019 -29023835 - AluSx SINE Alu -24 288 1 1915 141 10 14 chr2 221665115 221665405 -29022449 - AluJb SINE Alu -18 294 6 363 302 29 0 chr2 221665412 221665551 -29022303 - L1ME4a LINE L1 -237 5884 5742 2031 151 7 0 chr2 221665627 221665926 -29021928 + AluSx SINE Alu 5 305 -7 225 0 0 0 chr2 221665926 221665951 -29021903 + (TA)n Simple_repeat Simple_repeat 2 26 0 2014 125 3 47 chr2 221665975 221666295 -29021559 + AluSx SINE Alu 1 306 -6 677 238 47 15 chr2 221666295 221666494 -29021360 + MIR SINE MIR 53 259 -3 613 88 0 0 chr2 221666673 221666753 -29021101 - MADE1 DNA Mariner 0 80 1 2339 62 0 3 chr2 221666879 221667168 -29020686 + AluY SINE Alu 11 298 -13 579 181 0 0 chr2 221667207 221667323 -29020531 + GA-rich Low_complexity Low_complexity 4 119 0 250 130 56 19 chr2 221667423 221667477 -29020377 - AluS SINE Alu -238 61 6 1571 186 14 10 chr2 221667559 221667850 -29020004 + AluJb SINE Alu 2 293 -19 1464 133 53 9 chr2 221668247 221668472 -29019382 - MER46A DNA MER2_type -1 235 1 572 97 118 11 chr2 221668527 221668620 -29019234 - L1MB8 LINE L1 -5 6173 6071 1151 191 51 21 chr2 221668620 221668856 -29018998 - MSTB LTR MaLR 0 426 184 811 142 8 0 chr2 221668887 221669007 -29018847 - AluSg/x SINE Alu -21 291 171 2434 51 0 3 chr2 221669534 221669826 -29018028 - AluY SINE Alu -20 291 1 1713 186 225 136 chr2 221669826 221670355 -29017499 - L1M4 LINE L1 -1434 5523 5043 1779 146 42 0 chr2 221670355 221670643 -29017211 - AluSp SINE Alu -13 300 1 1087 96 0 0 chr2 221670643 221670778 -29017076 - AluSq/x SINE Alu -178 135 1 1713 186 225 136 chr2 221670778 221671247 -29016607 - L1M4 LINE L1 -1913 5044 5 180 0 0 0 chr2 221672127 221672147 -29015707 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2078 128 3 10 chr2 221672149 221672446 -29015408 - AluSx SINE Alu -17 295 1 308 237 62 10 chr2 221672785 221672882 -29014972 + MER113 DNA MER1_type? 236 337 -184 2353 89 0 25 chr2 221672903 221673218 -29014636 + AluSx SINE Alu 1 307 -5 355 242 201 9 chr2 221673695 221673914 -29013940 - L2 LINE L2 -977 2337 2077 1974 92 84 21 chr2 221674470 221674754 -29013100 - AluSx SINE Alu -10 302 1 227 366 30 0 chr2 221674843 221674944 -29012910 + L2 LINE L2 2653 2756 -558 507 285 103 80 chr2 221675453 221675731 -29012123 + L2 LINE L2 2873 3164 -108 1980 131 7 3 chr2 221675731 221676029 -29011825 - AluSq SINE Alu -14 299 1 507 285 103 80 chr2 221676029 221676139 -29011715 + L2 LINE L2 3164 3270 -2 2145 118 3 3 chr2 221676783 221677071 -29010783 - AluSx SINE Alu -20 292 5 2895 170 90 32 chr2 221677354 221677722 -29010132 - L1MC2 LINE L1 0 6344 5999 768 203 8 8 chr2 221677722 221677855 -29009999 - FLAM_A SINE Alu 0 133 1 2895 170 90 32 chr2 221677855 221678151 -29009703 - L1MC2 LINE L1 -345 5999 5641 476 156 62 138 chr2 221678169 221678329 -29009525 + L2 LINE L2 3152 3299 -14 2316 89 6 13 chr2 221678379 221678694 -29009160 - AluSq SINE Alu 0 313 1 872 267 85 23 chr2 221678738 221679128 -29008726 - HAL1b LINE L1 -308 1040 627 396 0 0 0 chr2 221679144 221679188 -29008666 + (TG)n Simple_repeat Simple_repeat 2 45 0 2343 78 0 0 chr2 221680773 221681066 -29006788 + AluY SINE Alu 1 293 -18 2242 92 0 7 chr2 221681199 221681492 -29006362 - AluSx SINE Alu -5 307 17 26 30 0 0 chr2 221682096 221682129 -29005725 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr2 221682239 221682267 -29005587 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr2 221683009 221683044 -29004810 + AT_rich Low_complexity Low_complexity 1 35 0 850 210 19 19 chr2 221683504 221683666 -29004188 + FAM SINE Alu 1 162 -13 236 167 0 0 chr2 221683897 221683939 -29003915 - L1MC/D LINE L1 -2077 5731 5690 640 249 113 64 chr2 221683942 221684315 -29003539 - L1MC/D LINE L1 -2164 5644 5254 2048 109 0 0 chr2 221684576 221684843 -29003011 - AluSx SINE Alu -45 267 1 290 256 158 30 chr2 221684905 221685038 -29002816 - HsTC2 DNA Tc2 -1015 883 734 1589 196 14 0 chr2 221686415 221686701 -29001153 + AluJb SINE Alu 2 291 -21 246 244 28 85 chr2 221686816 221686992 -29000862 - AluY SINE Alu -7 294 129 24 0 0 0 chr2 221687271 221687295 -29000559 + AT_rich Low_complexity Low_complexity 1 24 0 323 254 135 33 chr2 221687438 221687682 -29000172 - LTR37B LTR ERV1 -2 466 198 21 36 0 0 chr2 221687863 221687891 -28999963 + AT_rich Low_complexity Low_complexity 1 28 0 2145 111 10 3 chr2 221687930 221688227 -28999627 - AluSx SINE Alu -13 299 1 180 111 0 0 chr2 221689462 221689489 -28998365 + (T)n Simple_repeat Simple_repeat 1 27 0 1545 207 122 24 chr2 221689584 221689778 -28998076 + MLT1C LTR MaLR 1 174 -293 369 0 0 0 chr2 221689778 221689819 -28998035 + (CA)n Simple_repeat Simple_repeat 2 42 0 1545 207 122 24 chr2 221689819 221690049 -28997805 + MLT1C LTR MaLR 174 467 0 219 268 54 0 chr2 221690113 221690169 -28997685 + MIR SINE MIR 9 67 -195 2066 133 7 3 chr2 221690187 221690489 -28997365 + AluSx SINE Alu 1 303 -9 208 121 0 0 chr2 221690517 221690550 -28997304 + MIR SINE MIR 76 108 -154 963 184 0 0 chr2 221690624 221690782 -28997072 - FRAM SINE Alu -7 169 12 308 278 11 0 chr2 221690794 221690884 -28996970 - MIR SINE MIR -111 151 61 589 163 0 0 chr2 221690899 221690985 -28996869 - FRAM/FAM SINE Alu -93 83 1 381 255 0 3 chr2 221690992 221691100 -28996754 - L1MC4 LINE L1 0 8039 7890 1568 139 4 36 chr2 221691115 221691366 -28996488 - AluSx SINE Alu -69 243 1 821 191 0 0 chr2 221691374 221691505 -28996349 - FLAM_A SINE Alu -2 131 1 297 0 0 0 chr2 221691566 221691599 -28996255 + (CA)n Simple_repeat Simple_repeat 2 34 0 429 246 49 49 chr2 221691648 221691790 -28996064 - L1MC4 LINE L1 -133 7909 7768 2521 248 49 59 chr2 221691840 221692120 -28995734 - L1ME3A LINE L1 -5 6165 5884 2098 93 47 0 chr2 221692120 221692398 -28995456 - AluSp SINE Alu -22 291 1 2521 248 49 59 chr2 221692398 221692851 -28995003 - L1ME3A LINE L1 -286 5884 5438 2146 121 20 3 chr2 221692851 221693157 -28994697 - AluSx SINE Alu -1 311 1 2521 248 49 59 chr2 221693157 221693257 -28994597 - L1ME3A LINE L1 -732 5438 5339 2438 174 41 33 chr2 221693400 221693883 -28993971 - MLT1F LTR MaLR 0 542 56 2061 124 7 14 chr2 221693984 221694274 -28993580 - AluSx SINE Alu -24 288 1 252 264 0 0 chr2 221694363 221694435 -28993419 - L1ME LINE L1 -465 5705 5634 1575 203 40 65 chr2 221694736 221695136 -28992718 - MLT1B LTR MaLR 0 390 1 200 94 31 0 chr2 221695156 221695188 -28992666 + CT-rich Low_complexity Low_complexity 3 35 0 406 118 13 13 chr2 221695406 221695482 -28992372 + (TTCC)n Simple_repeat Simple_repeat 1 76 0 1467 156 20 36 chr2 221696153 221696454 -28991400 - AluY SINE Alu -15 296 1 496 133 72 0 chr2 221696519 221696602 -28991252 - FRAM SINE Alu -17 159 71 276 355 33 20 chr2 221696729 221696881 -28990973 - MIR SINE MIR -52 210 57 237 231 0 0 chr2 221697011 221697063 -28990791 - L1MCc LINE L1 -5091 1332 1281 1840 151 91 23 chr2 221698338 221698689 -28989165 - THE1C LTR MaLR 0 375 1 1211 183 72 21 chr2 221698864 221699154 -28988700 - L1MD1 LINE L1 0 6242 5938 1911 160 41 68 chr2 221699161 221699201 -28988653 - L1MD1 LINE L1 -545 5697 5657 1850 118 65 11 chr2 221699201 221699480 -28988374 - AluSx SINE Alu -18 294 1 1911 160 41 68 chr2 221699480 221699856 -28987998 - L1MD1 LINE L1 -585 5657 5299 2090 134 3 0 chr2 221699856 221700154 -28987700 - AluSx SINE Alu -13 299 1 1911 160 41 68 chr2 221700154 221700338 -28987516 - L1MD1 LINE L1 -943 5299 5112 1600 137 58 61 chr2 221700924 221701237 -28986617 + AluSx SINE Alu 1 312 0 554 198 57 1 chr2 221701853 221701988 -28985866 - L1ME1 LINE L1 0 6184 6036 243 326 53 0 chr2 221701988 221702083 -28985771 + MIR3 SINE MIR 83 182 -26 1608 182 21 18 chr2 221702669 221702978 -28984876 - AluJo SINE Alu 0 311 2 1471 204 27 60 chr2 221704364 221704732 -28983122 - MLT1A1 LTR MaLR -9 356 1 2225 118 10 0 chr2 221705198 221705504 -28982350 + AluSc SINE Alu 1 309 0 531 176 69 0 chr2 221706476 221706578 -28981276 - L1MC3 LINE L1 -619 7166 7058 2131 98 9 35 chr2 221706633 221706950 -28980904 - AluSg SINE Alu -1 309 1 243 300 139 43 chr2 221707113 221707393 -28980461 - L3 LINE CR1 -402 1175 869 1446 216 176 7 chr2 221707479 221707905 -28979949 + MLT1F LTR MaLR 45 542 0 826 155 90 39 chr2 221707997 221708152 -28979702 + AluJo SINE Alu 2 164 -148 317 212 129 12 chr2 221708171 221708256 -28979598 + L1MC3 LINE L1 7039 7133 -652 228 255 0 0 chr2 221708259 221708310 -28979544 + MLT1F1 LTR MaLR 75 125 -442 2457 157 141 2 chr2 221708310 221708807 -28979047 + L1MC3 LINE L1 7190 7755 -30 2374 98 0 0 chr2 221708816 221709113 -28978741 + AluSx SINE Alu 1 297 -15 1245 97 10 46 chr2 221709228 221709424 -28978430 + MER39B LTR ERV1 465 653 0 985 67 0 7 chr2 221709557 221709692 -28978162 - AluY SINE Alu -3 308 175 669 97 55 14 chr2 221709703 221709848 -28978006 + CT-rich Low_complexity Low_complexity 3 153 0 681 276 24 0 chr2 221709850 221710020 -28977834 - FRAM SINE Alu -2 174 1 269 172 0 31 chr2 221710050 221710114 -28977740 - L1MA9 LINE L1 0 6312 6251 190 279 44 127 chr2 221711435 221711593 -28976261 + MIR SINE MIR 20 164 -98 1191 78 0 0 chr2 221712156 221712310 -28975544 - AluY SINE Alu -10 301 148 293 299 71 0 chr2 221712319 221712446 -28975408 - L2 LINE L2 -814 2500 2365 410 0 20 0 chr2 221712488 221712538 -28975316 + (CA)n Simple_repeat Simple_repeat 2 52 0 480 146 114 28 chr2 221712779 221712977 -28974877 - HsTC2 DNA Tc2 -8 1890 1638 5486 28 5 0 chr2 221713113 221713714 -28974140 + L1PA5 LINE L1 5551 6154 0 251 250 0 0 chr2 221713895 221713951 -28973903 - HsTC2 DNA Tc2 -247 1651 1596 1486 237 75 12 chr2 221713955 221714458 -28973396 - MLT1F1 LTR MaLR -13 554 1 234 314 0 0 chr2 221714459 221714529 -28973325 - HsTC2 DNA Tc2 -293 1605 1536 1956 136 0 17 chr2 221714534 221714829 -28973025 + AluSg SINE Alu 5 294 -16 380 200 75 0 chr2 221714913 221714993 -28972861 - HsTC2 DNA Tc2 -574 1324 1239 231 296 37 12 chr2 221715013 221715094 -28972760 + L2 LINE L2 3230 3312 -1 21 57 0 0 chr2 221715713 221715748 -28972106 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr2 221715907 221715927 -28971927 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1923 150 0 0 chr2 221715929 221716209 -28971645 - AluSx SINE Alu -32 280 1 284 296 156 0 chr2 221716284 221716419 -28971435 + MIR SINE MIR 57 212 -50 2543 51 0 3 chr2 221716662 221716974 -28970880 + AluY SINE Alu 1 311 0 1292 81 6 6 chr2 221716976 221717150 -28970704 + AluY SINE Alu 127 300 -11 322 113 0 0 chr2 221717549 221717602 -28970252 - Alu SINE Alu -1 301 249 1467 170 60 4 chr2 221717602 221717867 -28969987 - AluJo SINE Alu -32 280 1 2264 92 33 0 chr2 221718019 221718322 -28969532 + AluSp SINE Alu 1 313 0 29 47 0 0 chr2 221718384 221718427 -28969427 + AT_rich Low_complexity Low_complexity 1 43 0 263 247 12 12 chr2 221718990 221719071 -28968783 + MIR SINE MIR 182 262 0 1911 188 10 33 chr2 221719493 221719887 -28967967 - MLT1B LTR MaLR -5 385 1 2424 88 7 0 chr2 221719955 221720262 -28967592 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 221720634 221720655 -28967199 + AT_rich Low_complexity Low_complexity 1 21 0 1491 149 24 60 chr2 221720737 221720784 -28967070 - MER33 DNA MER1_type -2261 324 277 2262 103 3 0 chr2 221720784 221721084 -28966770 - AluSx SINE Alu -11 301 1 1491 149 24 60 chr2 221721084 221721372 -28966482 - MER33 DNA MER1_type -2308 277 1 311 302 21 10 chr2 221721551 221721647 -28966207 - MLT1L LTR MaLR -81 534 438 351 184 74 22 chr2 221721778 221721921 -28965933 + L1M4c LINE L1 2231 2429 -3995 1489 176 126 4 chr2 221721922 221722177 -28965677 + AluJo SINE Alu 1 286 -16 271 167 0 0 chr2 221722199 221722247 -28965607 + L1M4c LINE L1 2380 2427 -3955 22 0 0 0 chr2 221722286 221722308 -28965546 + AT_rich Low_complexity Low_complexity 1 22 0 226 374 37 9 chr2 221722460 221722674 -28965180 - L2 LINE L2 -2575 739 520 439 198 0 0 chr2 221722790 221722871 -28964983 + U13 snRNA snRNA 1 81 -23 1937 152 3 0 chr2 221722871 221723168 -28964686 + AluSx SINE Alu 11 308 -4 2489 82 0 0 chr2 221723233 221723538 -28964316 + AluY SINE Alu 1 305 -6 1959 157 3 0 chr2 221723854 221724148 -28963706 + AluSx SINE Alu 1 295 -17 942 227 56 102 chr2 221724168 221724316 -28963538 + L2 LINE L2 1565 1718 -1596 1514 164 102 4 chr2 221724316 221724590 -28963264 + AluJb SINE Alu 1 301 -11 942 227 56 102 chr2 221724590 221724660 -28963194 + L2 LINE L2 1718 1790 -1524 1216 136 17 89 chr2 221724660 221724895 -28962959 + MER20 DNA MER1_type 2 219 0 942 227 56 102 chr2 221724895 221724966 -28962888 + L2 LINE L2 1790 1863 -1451 1938 128 46 0 chr2 221724966 221725248 -28962606 - AluSx SINE Alu -17 295 1 942 227 56 102 chr2 221725248 221725388 -28962466 + L2 LINE L2 1863 1976 -1338 1557 285 89 28 chr2 221725407 221726139 -28961715 + L2 LINE L2 2344 3120 -193 2105 104 36 0 chr2 221726174 221726453 -28961401 + AluSx SINE Alu 8 296 -16 2428 71 0 26 chr2 221727312 221727620 -28960234 + AluY SINE Alu 1 300 -11 294 266 0 13 chr2 221728096 221728175 -28959679 - MIR SINE MIR -111 151 74 1979 129 7 10 chr2 221728265 221728560 -28959294 - AluSx SINE Alu -14 298 5 981 114 8 0 chr2 221728567 221728699 -28959155 - AluSq/x SINE Alu -179 133 1 713 201 128 13 chr2 221728704 221728853 -28959001 - FRAM SINE Alu -9 167 2 446 238 0 0 chr2 221728857 221728941 -28958913 - FRAM/FAM SINE Alu -92 84 1 25 0 0 28 chr2 221729019 221729043 -28958811 + AT_rich Low_complexity Low_complexity 1 25 -10 2376 79 10 0 chr2 221729043 221729347 -28958507 - AluY SINE Alu -4 307 1 25 0 0 28 chr2 221729347 221729358 -28958496 + AT_rich Low_complexity Low_complexity 25 35 0 2344 59 3 7 chr2 221729358 221729646 -28958208 - AluY SINE Alu -24 287 1 2247 75 0 63 chr2 221730075 221730394 -28957460 + AluSx SINE Alu 1 299 -13 36 23 0 0 chr2 221730808 221730851 -28957003 + AT_rich Low_complexity Low_complexity 1 43 0 1365 175 28 35 chr2 221730977 221731307 -28956547 + AluSx SINE Alu 1 328 0 2288 82 0 38 chr2 221731310 221731628 -28956226 + AluSq SINE Alu 5 310 -3 1617 147 30 0 chr2 221732358 221732624 -28955230 - L1M4 LINE L1 -410 5774 5501 1790 174 0 13 chr2 221734420 221734724 -28953130 - AluJo SINE Alu -18 294 1 2023 146 3 0 chr2 221735477 221735778 -28952076 - AluSx SINE Alu -10 302 1 23 0 0 0 chr2 221737402 221737425 -28950429 + AT_rich Low_complexity Low_complexity 1 23 0 467 321 10 72 chr2 221737955 221738164 -28949690 - MIR3 SINE MIR -11 197 2 473 280 146 24 chr2 221738228 221738564 -28949290 + MLT1K LTR MaLR 212 588 0 21 36 0 0 chr2 221738573 221738601 -28949253 + AT_rich Low_complexity Low_complexity 1 28 0 237 33 0 0 chr2 221738918 221738948 -28948906 + (GA)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr2 221741318 221741340 -28946514 + AT_rich Low_complexity Low_complexity 1 22 0 1915 145 0 38 chr2 221741341 221741658 -28946196 - AluSx SINE Alu -7 305 1 23 0 0 0 chr2 221741679 221741702 -28946152 + AT_rich Low_complexity Low_complexity 1 23 0 427 294 21 32 chr2 221743910 221744097 -28943757 + MIR SINE MIR 65 249 -13 22 0 0 0 chr2 221744753 221744775 -28943079 + AT_rich Low_complexity Low_complexity 1 22 0 201 262 0 0 chr2 221745549 221745591 -28942263 + MIR3 SINE MIR 144 185 -23 186 71 0 0 chr2 221746081 221746109 -28941745 + (A)n Simple_repeat Simple_repeat 1 28 0 2216 100 0 13 chr2 221746524 221746823 -28941031 + AluSg SINE Alu 1 295 -15 1004 129 0 0 chr2 221747214 221747353 -28940501 - FLAM_C SINE Alu -4 139 1 2528 58 3 13 chr2 221749209 221749522 -28938332 - AluY SINE Alu -1 310 1 1315 141 123 21 chr2 221749890 221750174 -28937680 + THE1C LTR MaLR 1 313 -62 28 48 0 0 chr2 221752499 221752541 -28935313 + AT_rich Low_complexity Low_complexity 1 42 0 387 113 0 0 chr2 221752581 221752652 -28935202 + (TG)n Simple_repeat Simple_repeat 2 72 0 200 331 94 19 chr2 221752689 221752825 -28935029 - MIR SINE MIR -61 147 16 2072 153 65 32 chr2 221752826 221753238 -28934616 + MSTA LTR MaLR 1 426 -2 25 31 0 0 chr2 221753485 221753517 -28934337 + AT_rich Low_complexity Low_complexity 1 32 0 713 183 8 0 chr2 221753517 221753643 -28934211 - FLAM_C SINE Alu -2 131 5 1660 171 3 11 chr2 221755249 221755535 -28932319 - AluJo SINE Alu -28 284 1 2238 101 0 0 chr2 221757012 221757298 -28930556 - AluSg SINE Alu -11 299 14 2149 108 0 16 chr2 221758541 221758847 -28929007 - AluSx SINE Alu -11 301 1 228 276 86 43 chr2 221759281 221759397 -28928457 - L2 LINE L2 0 3313 3193 283 138 62 25 chr2 221760054 221760134 -28927720 - L1ME4a LINE L1 -22 6099 6017 198 0 0 0 chr2 221760788 221760810 -28927044 + (A)n Simple_repeat Simple_repeat 1 22 0 2434 95 0 0 chr2 221760819 221761125 -28926729 + AluSx SINE Alu 1 306 -6 247 236 22 34 chr2 221761178 221761267 -28926587 - L1MC4 LINE L1 -153 7889 7802 2501 77 0 0 chr2 221761318 221761615 -28926239 - AluSc SINE Alu -12 297 1 2258 113 3 0 chr2 221761616 221761916 -28925938 - AluSx SINE Alu -11 301 1 234 0 0 0 chr2 221762108 221762134 -28925720 + (T)n Simple_repeat Simple_repeat 1 26 0 183 156 0 0 chr2 221764204 221764236 -28923618 - MIR SINE MIR -72 190 159 329 250 98 0 chr2 221764260 221764372 -28923482 - L1MA10 LINE L1 -29 6305 6183 217 171 11 145 chr2 221764426 221764507 -28923347 - MIR SINE MIR -78 130 56 25 0 0 0 chr2 221764586 221764611 -28923243 + AT_rich Low_complexity Low_complexity 1 25 0 2130 129 7 3 chr2 221764634 221764943 -28922911 - AluSg SINE Alu 0 310 1 450 482 16 57 chr2 221764963 221765208 -28922646 - Tigger3(Golem) DNA MER2_type 0 3029 2795 231 169 113 145 chr2 221765331 221765420 -28922434 + MIR SINE MIR 34 119 -143 1874 135 7 20 chr2 221765420 221765723 -28922131 - AluJb SINE Alu -7 305 7 231 169 113 145 chr2 221765723 221765757 -28922097 + MIR SINE MIR 119 153 -109 23 0 0 0 chr2 221767282 221767305 -28920549 + AT_rich Low_complexity Low_complexity 1 23 0 216 0 0 0 chr2 221768673 221768697 -28919157 + (TA)n Simple_repeat Simple_repeat 2 25 0 545 117 21 11 chr2 221770149 221770243 -28917611 - AluSg/x SINE Alu -6 303 209 1937 117 0 7 chr2 221770544 221770818 -28917036 + AluSx SINE Alu 39 310 -2 21 0 0 0 chr2 221771767 221771788 -28916066 + AT_rich Low_complexity Low_complexity 1 21 0 361 289 53 35 chr2 221771819 221771933 -28915921 + MIR SINE MIR 36 151 -57 225 180 0 0 chr2 221772531 221772581 -28915273 + CT-rich Low_complexity Low_complexity 1 50 0 352 302 181 7 chr2 221774755 221774904 -28912950 - MER5A DNA MER1_type -6 183 9 2091 136 3 3 chr2 221775147 221775448 -28912406 + AluSx SINE Alu 1 301 -11 2381 90 0 10 chr2 221775711 221776022 -28911832 + AluSq SINE Alu 1 308 -5 3368 177 68 18 chr2 221776030 221776140 -28911714 + L1MB8 LINE L1 5057 5160 -1018 2072 116 17 7 chr2 221776140 221776434 -28911420 + AluSx SINE Alu 1 297 -15 3368 177 68 18 chr2 221776434 221777276 -28910578 + L1MB8 LINE L1 5160 6075 -103 1028 128 59 0 chr2 221777276 221777463 -28910391 + MSTB LTR MaLR 1 198 -228 1353 114 10 10 chr2 221777463 221777656 -28910198 + AluSq SINE Alu 1 193 -120 26 69 0 14 chr2 221777767 221777806 -28910048 + AT_rich Low_complexity Low_complexity 1 40 -31 2209 123 0 0 chr2 221777806 221778098 -28909756 - AluSx SINE Alu -20 292 1 26 69 0 14 chr2 221778098 221778130 -28909724 + AT_rich Low_complexity Low_complexity 40 71 0 900 113 5 38 chr2 221778161 221778347 -28909507 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 27 0 0 0 chr2 221778774 221778801 -28909053 + AT_rich Low_complexity Low_complexity 1 27 0 220 273 0 0 chr2 221779680 221779735 -28908119 - L2 LINE L2 -2 3311 3257 303 289 0 13 chr2 221781182 221781258 -28906596 - MER5C DNA MER1_type -249 75 1 230 0 33 0 chr2 221781284 221781314 -28906540 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 399 322 72 7 chr2 221782296 221782448 -28905406 + MIR SINE MIR 2 163 -99 2153 126 3 0 chr2 221782448 221782749 -28905105 + AluSx SINE Alu 1 302 -10 234 0 0 0 chr2 221784941 221784967 -28902887 + (CA)n Simple_repeat Simple_repeat 1 26 0 1863 151 0 7 chr2 221785568 221785852 -28902002 - AluSx SINE Alu -26 286 5 209 240 40 0 chr2 221785892 221785942 -28901912 + CT-rich Low_complexity Low_complexity 1 52 0 257 146 136 78 chr2 221786020 221786123 -28901731 + L1ME3A LINE L1 5994 6102 -68 198 0 0 0 chr2 221787117 221787139 -28900715 + (CA)n Simple_repeat Simple_repeat 2 23 0 235 306 109 27 chr2 221787326 221787473 -28900381 - MIR SINE MIR -25 237 79 2381 81 3 0 chr2 221787494 221787789 -28900065 - AluSp SINE Alu -13 300 5 2358 73 0 13 chr2 221788652 221788953 -28898901 - AluSc SINE Alu -12 297 1 199 229 104 62 chr2 221789189 221789285 -28898569 - L2 LINE L2 -5 3267 3168 1053 163 0 0 chr2 221789429 221789595 -28898259 - AluJb SINE Alu -18 294 129 198 0 0 0 chr2 221789747 221789769 -28898085 + (T)n Simple_repeat Simple_repeat 1 22 0 2101 110 3 17 chr2 221790113 221790405 -28897449 - AluSx SINE Alu -24 288 1 544 299 98 31 chr2 221790522 221790968 -28896886 - HAL1 LINE L1 -592 1915 1300 25 0 0 0 chr2 221792182 221792207 -28895647 + AT_rich Low_complexity Low_complexity 1 25 0 239 214 21 79 chr2 221795246 221795357 -28892497 - MIR3 SINE MIR -29 179 76 23 33 0 0 chr2 221796658 221796688 -28891166 + AT_rich Low_complexity Low_complexity 1 30 0 1706 102 8 0 chr2 221797117 221797353 -28890501 + AluSp SINE Alu 75 312 -1 328 328 33 8 chr2 221798294 221798416 -28889438 + MIR3 SINE MIR 62 186 -22 26 30 0 0 chr2 221800102 221800135 -28887719 + AT_rich Low_complexity Low_complexity 1 33 0 318 26 0 0 chr2 221800166 221800205 -28887649 + (CA)n Simple_repeat Simple_repeat 1 39 0 230 240 30 50 chr2 221801902 221802002 -28885852 + L1ME4a LINE L1 5959 6056 -65 2042 102 0 66 chr2 221802523 221802857 -28884997 - AluSx SINE Alu 0 312 1 2796 29 0 0 chr2 221803122 221803433 -28884421 - AluY SINE Alu 0 311 1 2521 71 0 0 chr2 221803849 221804160 -28883694 - AluY SINE Alu 0 311 1 2012 89 38 27 chr2 221805722 221806049 -28881805 + AluSx SINE Alu 1 312 0 186 103 0 0 chr2 221808252 221808281 -28879573 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 238 203 0 17 chr2 221810054 221810113 -28877741 + (CA)n Simple_repeat Simple_repeat 2 59 0 2207 99 3 0 chr2 221810804 221811114 -28876740 + AluSx SINE Alu 1 311 0 21 0 0 0 chr2 221811368 221811389 -28876465 + AT_rich Low_complexity Low_complexity 1 21 0 31 68 0 0 chr2 221813146 221813205 -28874649 + GC_rich Low_complexity Low_complexity 1 59 0 649 22 45 0 chr2 221815558 221815647 -28872207 + (TTTC)n Simple_repeat Simple_repeat 4 96 0 695 243 31 35 chr2 221815666 221815925 -28871929 + L1MB7 LINE L1 5927 6184 0 1293 191 16 72 chr2 221816471 221816775 -28871079 + AluJo SINE Alu 1 287 -25 191 53 0 79 chr2 221817027 221817065 -28870789 + (T)n Simple_repeat Simple_repeat 1 35 0 2496 52 0 40 chr2 221818025 221818349 -28869505 + AluY SINE Alu 1 311 0 339 282 60 13 chr2 221818430 221818582 -28869272 - MIR SINE MIR -3 259 102 341 267 83 25 chr2 221819017 221819137 -28868717 + L2 LINE L2 3145 3271 -1 339 326 87 20 chr2 221819191 221819387 -28868467 - MIR SINE MIR -35 227 19 272 223 198 8 chr2 221819652 221819773 -28868081 + MER106B DNA MER1_type 3 146 -913 2274 111 7 0 chr2 221819778 221820076 -28867778 - AluSx SINE Alu -12 300 1 264 296 61 0 chr2 221820232 221820364 -28867490 + LTR33 LTR ERVL 326 465 -56 1994 119 59 0 chr2 221820415 221820701 -28867153 - AluSq SINE Alu -9 304 2 1796 163 0 14 chr2 221821014 221821303 -28866551 - AluJb SINE Alu -27 285 1 2057 113 7 0 chr2 221821823 221822135 -28865719 - AluSx SINE Alu 0 314 1 829 143 0 8 chr2 221822346 221822479 -28865375 - FLAM_C SINE Alu 0 133 2 21 0 0 0 chr2 221822571 221822592 -28865262 + AT_rich Low_complexity Low_complexity 1 21 0 289 219 37 0 chr2 221822989 221823071 -28864783 - L1MA10 LINE L1 -1 6333 6249 407 270 11 63 chr2 221823781 221823955 -28863899 + MLT1J2 LTR MaLR 1 165 -285 1964 197 75 7 chr2 221824486 221824923 -28862931 + MLT1C LTR MaLR 1 467 0 827 282 140 57 chr2 221825313 221826269 -28861585 + HAL1 LINE L1 19 1054 -1453 696 177 34 26 chr2 221826281 221826518 -28861336 + MLT1B LTR MaLR 136 385 -5 1245 212 68 21 chr2 221826632 221826957 -28860897 + MER58B DNA MER1_type 2 341 0 2287 152 14 30 chr2 221827144 221827201 -28860653 + MSTB LTR MaLR 1 57 -369 2164 133 58 3 chr2 221827201 221827546 -28860308 - THE1B LTR MaLR 0 364 1 2287 152 14 30 chr2 221827546 221827921 -28859933 + MSTB LTR MaLR 57 426 0 195 351 30 60 chr2 221828198 221828332 -28859522 + L2 LINE L2 3175 3304 -9 23 33 0 0 chr2 221829231 221829261 -28858593 + AT_rich Low_complexity Low_complexity 1 30 0 325 305 51 0 chr2 221829265 221829383 -28858471 + MIR3 SINE MIR 54 177 -31 476 256 213 34 chr2 221830755 221830962 -28856892 + L3 LINE CR1 1333 1576 -1 333 182 39 0 chr2 221832435 221832512 -28855342 - MER116 DNA Mariner 0 80 1 1585 126 0 0 chr2 221832533 221832740 -28855114 - AluSg/x SINE Alu -18 294 88 1151 124 0 0 chr2 221832742 221832895 -28854959 - AluSq SINE Alu -160 153 1 1974 161 173 36 chr2 221832900 221833403 -28854451 - MLT1E2 LTR MaLR -4 622 51 568 276 102 49 chr2 221833416 221833662 -28854192 + MIR SINE MIR 4 262 0 219 296 0 0 chr2 221833664 221833718 -28854136 + GA-rich Low_complexity Low_complexity 3 56 0 2046 136 10 0 chr2 221834075 221834370 -28853484 - AluSx SINE Alu -14 298 1 303 172 0 140 chr2 221834710 221834803 -28853051 - MADE1 DNA Mariner 0 80 1 903 320 53 30 chr2 221834851 221835360 -28852494 + MLT1K LTR MaLR 61 581 -7 329 152 11 130 chr2 221836227 221836276 -28851578 - MIR3 SINE MIR -17 191 156 2174 124 3 0 chr2 221836276 221836582 -28851272 - AluSx SINE Alu -5 307 1 329 152 11 130 chr2 221836582 221836624 -28851230 - MIR3 SINE MIR -52 156 111 490 252 67 52 chr2 221836844 221837054 -28850800 - L1MC5 LINE L1 -31 7930 7718 183 343 10 49 chr2 221838731 221838833 -28849021 + MIR SINE MIR 37 134 -128 513 362 65 50 chr2 221838945 221839343 -28848511 - L2 LINE L2 -3 3269 2866 1745 187 27 24 chr2 221839633 221840007 -28847847 + THE1C LTR MaLR 1 375 0 2404 81 3 0 chr2 221840149 221840457 -28847397 + AluY SINE Alu 1 309 -2 236 239 36 87 chr2 221840501 221840639 -28847215 + LTR67 LTR ERVL 427 557 0 2367 99 0 0 chr2 221840901 221841204 -28846650 + AluSx SINE Alu 1 303 -9 24 0 0 0 chr2 221841380 221841404 -28846450 + AT_rich Low_complexity Low_complexity 1 24 0 2279 75 0 0 chr2 221841408 221841724 -28846130 + AluY SINE Alu 1 316 0 736 271 61 52 chr2 221843185 221843495 -28844359 - MLT1K LTR MaLR -2 586 274 13972 123 34 36 chr2 221844078 221844281 -28843573 - Tigger1 DNA MER2_type 0 2418 2216 2244 110 0 0 chr2 221844281 221844591 -28843263 + AluSg SINE Alu 1 310 0 13972 123 34 36 chr2 221844591 221845349 -28842505 - Tigger1 DNA MER2_type -202 2216 1458 2395 71 3 16 chr2 221845349 221845660 -28842194 + AluSc SINE Alu 1 307 -2 13972 123 34 36 chr2 221845660 221846176 -28841678 - Tigger1 DNA MER2_type -960 1458 942 2324 110 7 0 chr2 221846176 221846486 -28841368 - AluSx SINE Alu 0 312 1 13972 123 34 36 chr2 221846486 221847425 -28840429 - Tigger1 DNA MER2_type -1476 942 5 2402 88 3 0 chr2 221847425 221847732 -28840122 + AluSp SINE Alu 1 308 -5 750 142 0 88 chr2 221848518 221848550 -28839304 - FLAM_C SINE Alu -177 135 102 2220 115 0 0 chr2 221848550 221848860 -28838994 + AluSq SINE Alu 1 310 0 750 142 0 88 chr2 221848860 221848974 -28838880 - FLAM_C SINE Alu -210 102 1 2696 107 3 0 chr2 221850221 221850584 -28837270 + THE1B LTR MaLR 1 364 0 190 277 145 72 chr2 221850719 221850802 -28837052 - L2 LINE L2 -36 3236 3148 323 282 33 55 chr2 221852339 221852520 -28835334 + L1 LINE L1 3555 3731 -2415 927 231 37 19 chr2 221853799 221854124 -28833730 + MER69 DNA AcHobo 2029 2359 -167 813 162 0 15 chr2 221854148 221854284 -28833570 + AluJb SINE Alu 1 134 -178 230 242 0 0 chr2 221854430 221854496 -28833358 + A-rich Low_complexity Low_complexity 1 66 0 2374 78 3 0 chr2 221854821 221855117 -28832737 - AluY SINE Alu -14 297 1 24 32 0 0 chr2 221855179 221855210 -28832644 + AT_rich Low_complexity Low_complexity 1 31 0 183 80 0 0 chr2 221856387 221856412 -28831442 + (TG)n Simple_repeat Simple_repeat 2 26 0 694 279 61 53 chr2 221856844 221857238 -28830616 + LTR33 LTR ERVL 101 497 -24 576 303 73 50 chr2 221858730 221859030 -28828824 - L2 LINE L2 -30 3283 2977 2295 95 10 3 chr2 221859073 221859379 -28828475 + AluSx SINE Alu 2 309 -3 1252 176 46 16 chr2 221859380 221859686 -28828168 - MER33 DNA MER1_type 0 324 10 1258 262 30 3 chr2 221860422 221860754 -28827100 - MER58B DNA MER1_type 0 341 1 215 263 7 58 chr2 221860785 221860922 -28826932 + CT-rich Low_complexity Low_complexity 3 132 0 2267 107 27 0 chr2 221862789 221863087 -28824767 - AluSx SINE Alu -6 306 1 1811 269 74 25 chr2 221863087 221863652 -28824202 + MLT1G1 LTR MaLR 1 593 -2 681 312 108 4 chr2 221864730 221864961 -28822893 + MIR SINE MIR 8 262 0 2804 85 27 0 chr2 221865485 221865896 -28821958 + L1PA13 LINE L1 5740 6161 -2 565 285 136 5 chr2 221866536 221866757 -28821097 + LTR33A LTR ERVL 7 256 -267 292 291 27 0 chr2 221866785 221866895 -28820959 + LTR33A LTR ERVL 411 523 0 5264 154 31 27 chr2 221867380 221868506 -28819348 - L1MC2 LINE L1 -33 6311 5183 240 284 35 60 chr2 221869123 221869239 -28818615 + MIR SINE MIR 2 114 -148 340 292 143 9 chr2 221869868 221870324 -28817530 + L1ME4a LINE L1 5482 5998 -123 579 214 104 7 chr2 221870332 221870486 -28817368 - MLT1J2 LTR MaLR -2 448 280 373 213 96 37 chr2 221870531 221870667 -28817187 - MLT1J2 LTR MaLR -269 181 38 468 111 0 0 chr2 221871388 221871460 -28816394 + (TTCC)n Simple_repeat Simple_repeat 1 72 0 1242 150 49 16 chr2 221871677 221872080 -28815774 + L1MC/D LINE L1 5186 5607 -743 242 264 61 78 chr2 221872224 221872455 -28815399 + HAL1 LINE L1 2225 2451 -56 1107 190 15 38 chr2 221873059 221873322 -28814532 - L1MC1 LINE L1 -6 6327 6071 1040 183 5 0 chr2 221873328 221873514 -28814340 - MER54B LTR ERVL -4 789 603 1097 141 11 0 chr2 221873626 221873817 -28814037 + L1MC/D LINE L1 5414 5606 -727 7374 78 6 19 chr2 221875415 221876486 -28811368 + MER11C LTR ERVK 1 1057 -14 1615 160 4 0 chr2 221876774 221877012 -28810842 + AluSx SINE Alu 53 291 -21 640 314 89 38 chr2 221878569 221878941 -28808913 + L3b LINE CR1 1117 1507 -76 252 0 0 0 chr2 221879185 221879213 -28808641 + (TG)n Simple_repeat Simple_repeat 2 29 0 597 176 14 14 chr2 221879340 221879488 -28808366 + CT-rich Low_complexity Low_complexity 3 150 0 2176 107 0 0 chr2 221880201 221880491 -28807363 + AluSc SINE Alu 14 303 -6 226 169 113 42 chr2 221880596 221880667 -28807187 - L1MC5 LINE L1 -54 7907 7832 201 39 0 0 chr2 221880710 221880736 -28807118 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1983 184 63 35 chr2 221880873 221881363 -28806491 - MLT1D LTR MaLR 0 505 2 2059 101 29 0 chr2 221881611 221881917 -28805937 + AluSx SINE Alu 1 314 0 2338 37 0 0 chr2 221884683 221884953 -28802901 + AluY SINE Alu 35 304 -7 235 256 141 0 chr2 221885743 221885821 -28802033 - MIR3 SINE MIR -53 155 67 21 57 0 0 chr2 221885821 221885856 -28801998 + AT_rich Low_complexity Low_complexity 1 35 0 202 200 0 0 chr2 221887450 221887490 -28800364 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 700 251 91 39 chr2 221887779 221888010 -28799844 - MIR SINE MIR 0 262 20 2324 118 19 14 chr2 221888041 221888405 -28799449 + MER47A DNA MER2_type 1 366 0 1224 127 0 0 chr2 221888422 221888588 -28799266 + AluSg/x SINE Alu 132 297 -15 3712 69 2 4 chr2 221888630 221889111 -28798743 + L1PA7 LINE L1 5675 6154 0 277 274 63 0 chr2 221889111 221889206 -28798648 - L1MC4 LINE L1 -40 8002 7902 528 247 40 45 chr2 221889290 221889554 -28798300 - L1MC4 LINE L1 -239 7569 7314 704 266 70 23 chr2 221889602 221889858 -28797996 - L1MC4 LINE L1 -1041 7001 6734 330 150 17 0 chr2 221889885 221889945 -28797909 - L1MB2 LINE L1 -8 6163 6103 511 292 131 56 chr2 221889946 221890306 -28797548 - L1MC4a LINE L1 -1145 6663 6277 288 0 0 0 chr2 221890425 221890457 -28797397 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 570 292 101 41 chr2 221890533 221891075 -28796779 - L2 LINE L2 -140 3173 2533 1881 254 203 13 chr2 221891245 221891319 -28796535 - L1MC4 LINE L1 -95 7713 7654 1916 130 27 33 chr2 221891319 221891618 -28796236 - AluSx SINE Alu -15 297 1 1881 254 203 13 chr2 221891618 221892516 -28795338 - L1MC4 LINE L1 -154 7654 6666 445 189 9 38 chr2 221892515 221892621 -28795233 + L1MC4 LINE L1 7260 7362 -680 * 677 256 126 8 chr2 221892623 221892877 -28794977 - L1MC4 LINE L1 -1298 6744 6461 200 234 0 16 chr2 221893764 221893828 -28794026 + GA-rich Low_complexity Low_complexity 1 63 0 2221 119 0 0 chr2 221895147 221895441 -28792413 - AluSx SINE Alu -18 294 1 525 221 43 0 chr2 221895470 221895607 -28792247 - LTR16A1 LTR ERVL 0 457 315 2962 64 15 17 chr2 221895607 221896012 -28791842 + MLT2A1 LTR ERVL 1 404 -40 298 108 31 0 chr2 221896068 221896133 -28791721 + (TA)n Simple_repeat Simple_repeat 1 67 0 318 59 78 0 chr2 221896133 221896184 -28791670 + MLT2A1 LTR ERVL 390 444 0 30 0 0 0 chr2 221896689 221896719 -28791135 + AT_rich Low_complexity Low_complexity 1 30 0 326 274 102 19 chr2 221897776 221898009 -28789845 - Charlie8 DNA MER1_type -1013 1404 59 236 228 0 0 chr2 221898042 221898099 -28789755 - LTR33 LTR ERVL -464 57 1 1481 207 32 45 chr2 221898151 221898528 -28789326 - MLT1B LTR MaLR 0 390 19 963 209 41 0 chr2 221899142 221899314 -28788540 + MER5A DNA MER1_type 11 189 0 473 293 21 49 chr2 221899525 221899710 -28788144 - MIR SINE MIR -48 214 35 711 253 5 5 chr2 221899805 221900003 -28787851 - MER105 DNA DNA -5 199 2 198 359 78 36 chr2 221900116 221900308 -28787546 + MIR3 SINE MIR 6 205 -3 1569 197 7 4 chr2 221901665 221901944 -28785910 + AluJb SINE Alu 1 280 -32 406 313 49 0 chr2 221902208 221902352 -28785502 - L2 LINE L2 0 3313 3163 1062 307 180 48 chr2 221902421 221902618 -28785236 - L2 LINE L2 -411 2903 2733 1564 193 40 0 chr2 221902618 221902892 -28784962 + AluSx SINE Alu 15 299 -13 2071 171 36 8 chr2 221902898 221903283 -28784571 + MSTD LTR MaLR 1 396 0 1062 307 180 48 chr2 221903283 221903563 -28784291 - L2 LINE L2 -585 2729 2487 2203 125 3 3 chr2 221903563 221903867 -28783987 + AluSx SINE Alu 1 304 -8 1062 307 180 48 chr2 221903867 221904216 -28783638 - L2 LINE L2 -827 2487 1959 1557 132 60 8 chr2 221904625 221904875 -28782979 + AluSx SINE Alu 35 297 -15 1995 122 51 3 chr2 221906268 221906563 -28781291 + AluSx SINE Alu 1 309 -3 21 36 0 0 chr2 221906872 221906900 -28780954 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 221907330 221907351 -28780503 + AT_rich Low_complexity Low_complexity 1 21 0 978 184 33 40 chr2 221907967 221908248 -28779606 + MLT1B LTR MaLR 131 390 0 1699 148 33 25 chr2 221908281 221908654 -28779200 - Tigger3(Golem) DNA MER2_type -1 3028 1 539 247 111 15 chr2 221908670 221908838 -28779016 + MIR SINE MIR 63 252 -10 232 300 86 0 chr2 221908886 221908956 -28778898 + MIR SINE MIR 37 112 -150 299 256 43 17 chr2 221909536 221909653 -28778201 - L1ME LINE L1 -264 5857 5738 2154 157 14 20 chr2 221911146 221911593 -28776261 + L1MB3 LINE L1 5234 5677 -506 1815 167 121 21 chr2 221911670 221912059 -28775795 + MSTA LTR MaLR 1 428 0 9678 135 12 26 chr2 221912061 221913660 -28774194 + MSTA-int LTR MaLR 3 1580 0 2030 126 123 18 chr2 221913660 221914041 -28773813 + MSTA LTR MaLR 1 421 -7 357 151 0 14 chr2 221914041 221914114 -28773740 + L1MB3 LINE L1 5709 5780 -391 1413 144 88 11 chr2 221914115 221914399 -28773455 + L1MB3 LINE L1 5876 6181 -2 2304 90 7 0 chr2 221915703 221916002 -28771852 + AluSp SINE Alu 1 301 -12 373 288 0 9 chr2 221916617 221916728 -28771126 + MER63 DNA MER1_type 691 800 -262 572 91 11 0 chr2 221916820 221916908 -28770946 + (TTCC)n Simple_repeat Simple_repeat 4 92 0 228 351 24 34 chr2 221916972 221917177 -28770677 - L1ME LINE L1 -2166 5642 5440 589 261 80 61 chr2 221917404 221917668 -28770186 + MLT1A2 LTR MaLR 1 269 -105 568 316 98 51 chr2 221917927 221918594 -28769260 + L2 LINE L2 2228 2925 -389 1698 38 0 14 chr2 221918629 221918839 -28769015 - AluY SINE Alu -6 305 99 220 167 0 33 chr2 221918876 221918936 -28768918 + (TTTA)n Simple_repeat Simple_repeat 1 58 0 603 294 7 0 chr2 221918943 221919079 -28768775 + L2 LINE L2 3134 3270 -2 2099 152 25 3 chr2 221920579 221920935 -28766919 - THE1B LTR MaLR 0 364 1 355 251 115 21 chr2 221922280 221922471 -28765383 - L1ME1 LINE L1 -233 5937 5726 336 315 87 58 chr2 221922472 221922818 -28765036 - L2 LINE L2 -859 2455 2100 748 234 8 75 chr2 221922875 221923114 -28764740 + MER58A DNA MER1_type 1 223 -1 189 0 0 0 chr2 221924036 221924057 -28763797 + (CA)n Simple_repeat Simple_repeat 2 22 0 553 239 5 127 chr2 221924064 221924214 -28763640 - MER5B DNA MER1_type -5 173 51 2588 36 0 3 chr2 221924214 221924516 -28763338 + AluY SINE Alu 1 301 -10 553 239 5 127 chr2 221924516 221924562 -28763292 - MER5B DNA MER1_type -127 51 1 920 237 5 0 chr2 221924983 221925169 -28762685 - MER5A DNA MER1_type -2 187 1 365 198 76 151 chr2 221926672 221926844 -28761010 + MER5B DNA MER1_type 17 175 -3 249 259 0 17 chr2 221926970 221927028 -28760826 - MER5B DNA MER1_type 0 178 122 1238 158 31 0 chr2 221927035 221927257 -28760597 + AluSx SINE Alu 1 229 -83 1948 107 0 4 chr2 221927385 221927665 -28760189 + L1PA8 LINE L1 5887 6165 -7 774 257 59 23 chr2 221927762 221928065 -28759789 - L1MC4 LINE L1 -544 7498 7185 358 219 22 34 chr2 221928457 221928635 -28759219 + (TA)n Simple_repeat Simple_repeat 2 177 0 2081 158 70 73 chr2 221929347 221929717 -28758137 - MLT1C LTR MaLR 0 467 97 2149 138 0 16 chr2 221929717 221930028 -28757826 - AluSx SINE Alu -6 306 1 2081 158 70 73 chr2 221930028 221930125 -28757729 - MLT1C LTR MaLR -370 97 1 444 294 81 109 chr2 221931203 221931785 -28756069 + L2 LINE L2 2703 3271 -1 712 285 24 1 chr2 221931867 221932096 -28755758 + L1ME3 LINE L1 5931 6170 0 1556 228 51 41 chr2 221932791 221933278 -28754576 - L1M2b LINE L1 -6705 504 13 405 0 0 0 chr2 221933380 221933425 -28754429 + (CA)n Simple_repeat Simple_repeat 1 45 0 1687 212 0 3 chr2 221933471 221933773 -28754081 + AluJb SINE Alu 1 301 -11 455 161 12 0 chr2 221933776 221933857 -28753997 - MLT1G1 LTR MaLR -32 563 482 692 82 0 0 chr2 221934505 221934602 -28753252 + MER41B LTR ERV1 1 97 -538 1477 178 38 29 chr2 221934602 221935019 -28752835 - pTR5 LTR ERV1 -1275 1163 743 422 278 81 24 chr2 221935100 221935309 -28752545 - LTR50 LTR ERVL -572 223 3 1744 172 3 35 chr2 221935658 221935972 -28751882 + AluJo SINE Alu 5 308 -4 322 256 80 7 chr2 221936187 221936324 -28751530 + L1ME4a LINE L1 5964 6110 -11 510 240 48 7 chr2 221937317 221937463 -28750391 + MLT1I LTR MaLR 247 398 -11 3763 101 35 0 chr2 221937466 221938001 -28749853 - MER41A LTR ERV1 0 554 1 192 321 97 8 chr2 221940062 221940196 -28747658 + L3 LINE CR1 963 1108 -469 422 297 72 0 chr2 221941652 221941790 -28746064 + L2 LINE L2 3121 3268 -4 22 0 0 0 chr2 221942182 221942204 -28745650 + AT_rich Low_complexity Low_complexity 1 22 0 182 316 13 26 chr2 221942491 221942567 -28745287 - L2 LINE L2 -2791 523 449 441 270 101 13 chr2 221942820 221942979 -28744875 + MIR SINE MIR 47 219 -43 2242 101 3 7 chr2 221943276 221943582 -28744272 - AluSg SINE Alu -5 305 1 1204 54 0 0 chr2 221944725 221944874 -28742980 + L1PA6 LINE L1 6001 6149 -5 472 298 124 43 chr2 221945358 221945657 -28742197 + L1ME4a LINE L1 5569 5891 -230 10514 174 43 24 chr2 221945697 221948062 -28739792 + L1MC3 LINE L1 5218 7626 -159 207 88 0 0 chr2 221948203 221948237 -28739617 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 228 233 81 0 chr2 221948248 221948334 -28739520 + L1ME4a LINE L1 5960 6052 -69 21 36 0 0 chr2 221948501 221948529 -28739325 + AT_rich Low_complexity Low_complexity 1 28 0 388 92 67 0 chr2 221949003 221949122 -28738732 + (TA)n Simple_repeat Simple_repeat 2 128 0 16855 189 10 15 chr2 221949171 221949551 -28738303 - L1PA15 LINE L1 -4 7599 7219 517 101 0 13 chr2 221949551 221949630 -28738224 + MADE1 DNA Mariner 1 78 -2 16855 189 10 15 chr2 221949630 221954552 -28733302 - L1PA15 LINE L1 -384 7219 2319 314 352 41 32 chr2 221955356 221955700 -28732154 - L1PA15 LINE L1 -7228 353 7 192 398 9 18 chr2 221955741 221955854 -28732000 - L2 LINE L2 -6 3266 3155 23 86 0 0 chr2 221955877 221955935 -28731919 + AT_rich Low_complexity Low_complexity 1 58 0 3171 168 6 4 chr2 221956561 221957079 -28730775 - MLT2B1 LTR ERVL 0 520 2 688 268 71 83 chr2 221957154 221957662 -28730192 + L1ME LINE L1 315 816 -5556 673 280 75 32 chr2 221957803 221958947 -28728907 + L1ME LINE L1 781 2103 -4460 23 54 0 0 chr2 221961710 221961747 -28726107 + AT_rich Low_complexity Low_complexity 1 37 0 441 324 18 12 chr2 221962281 221962451 -28725403 + L2 LINE L2 2944 3114 -199 276 257 40 0 chr2 221962452 221962526 -28725328 - MLT1I LTR MaLR -5 404 328 394 231 111 9 chr2 221962654 221962762 -28725092 - MLT1I LTR MaLR -239 170 52 626 207 133 27 chr2 221962787 221962975 -28724879 + L2 LINE L2 3106 3313 0 443 241 145 52 chr2 221963019 221963160 -28724694 - MER102a DNA MER1_type -1102 315 188 2217 100 3 7 chr2 221963160 221963461 -28724393 - AluSq SINE Alu -13 300 1 443 241 145 52 chr2 221963461 221963568 -28724286 - MER102a DNA MER1_type -1229 188 44 305 288 63 11 chr2 221965512 221965703 -28722151 + L1ME3A LINE L1 895 1095 -5024 566 229 56 49 chr2 221965706 221966029 -28721825 + L1MA10 LINE L1 5840 6327 -5 377 290 212 12 chr2 221966056 221966311 -28721543 + L1ME3A LINE L1 3138 3443 -2686 1002 118 0 7 chr2 221966328 221966464 -28721390 + AluSq/x SINE Alu 1 135 -177 2223 129 3 0 chr2 221966464 221966773 -28721081 + AluSx SINE Alu 1 310 -2 1524 196 87 49 chr2 221966798 221967247 -28720607 + MLT1C LTR MaLR 1 466 -1 2320 93 10 0 chr2 221967425 221967735 -28720119 + AluSq SINE Alu 1 313 0 1990 136 31 0 chr2 221967814 221968101 -28719753 + AluSx SINE Alu 1 296 -16 276 293 48 62 chr2 221968137 221968495 -28719359 + L1ME3A LINE L1 3734 4086 -2043 515 258 127 56 chr2 221968579 221968792 -28719062 + L2 LINE L2 3075 3302 -11 331 294 44 56 chr2 221968807 221968987 -28718867 + L1ME3A LINE L1 5768 5945 -208 24 0 0 0 chr2 221969133 221969157 -28718697 + AT_rich Low_complexity Low_complexity 1 24 0 2292 133 3 3 chr2 221969157 221969518 -28718336 - L1PB3 LINE L1 -1 6153 5793 333 0 0 0 chr2 221969519 221969556 -28718298 + (TG)n Simple_repeat Simple_repeat 2 38 0 259 318 29 0 chr2 221969560 221969733 -28718121 + (TA)n Simple_repeat Simple_repeat 2 179 0 1213 105 5 34 chr2 221969825 221970034 -28717820 - L1PB3 LINE L1 -377 5777 5575 1171 46 13 7 chr2 221970615 221970768 -28717086 - AluY SINE Alu -10 301 148 772 42 21 0 chr2 221970768 221970863 -28716991 + AluY SINE Alu 5 101 -210 657 126 8 16 chr2 221971098 221971225 -28716629 + (GGAA)n Simple_repeat Simple_repeat 3 128 0 947 166 19 33 chr2 221972725 221972936 -28714918 + MER3 DNA MER1_type 1 208 -1 217 228 33 98 chr2 221973069 221973161 -28714693 - MIR SINE MIR -67 195 110 1774 183 127 25 chr2 221974564 221975174 -28712680 - MER39 LTR ERV1 0 707 2 264 59 0 0 chr2 221975445 221975479 -28712375 + (GA)n Simple_repeat Simple_repeat 1 34 0 1578 172 7 24 chr2 221975644 221975940 -28711914 - AluJo SINE Alu -12 300 10 391 276 88 58 chr2 221975985 221976325 -28711529 - L1ME3A LINE L1 -256 5914 5558 724 317 149 8 chr2 221976334 221976911 -28710943 + L2 LINE L2 2646 3299 -14 473 226 32 0 chr2 221977034 221977127 -28710727 + L2 LINE L2 3160 3255 -17 213 39 0 0 chr2 221977129 221977155 -28710699 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 258 255 92 31 chr2 221977397 221977495 -28710359 + MER5B DNA MER1_type 2 105 -73 23 68 0 0 chr2 221978596 221978640 -28709214 + AT_rich Low_complexity Low_complexity 1 44 0 1936 214 117 10 chr2 221979309 221979888 -28707966 + MLT1E1 LTR MaLR 8 648 -6 284 282 78 19 chr2 221979903 221980006 -28707848 + L2 LINE L2 3162 3270 -2 201 310 43 52 chr2 221981027 221981143 -28706711 - MIR SINE MIR -32 230 116 239 309 199 25 chr2 221981154 221981355 -28706499 + MIR SINE MIR 17 252 -10 235 333 31 0 chr2 221981358 221981454 -28706400 - MIR SINE MIR -80 128 30 503 244 96 26 chr2 221982419 221982575 -28705279 - MER5A DNA MER1_type 0 189 23 386 259 92 38 chr2 221982661 221982792 -28705062 - L2 LINE L2 -1 3271 3134 191 270 143 0 chr2 221983263 221983326 -28704528 - L2 LINE L2 -4 3268 3197 5815 147 9 12 chr2 221983333 221983597 -28704257 + L1MA4 LINE L1 5004 5267 -1033 3604 124 24 0 chr2 221983597 221984138 -28703716 - MER41C LTR ERV1 0 554 1 5815 147 9 12 chr2 221984138 221985177 -28702677 + L1MA4 LINE L1 5267 6299 -1 194 138 0 0 chr2 221985201 221985230 -28702624 - L2 LINE L2 -96 3176 3148 341 322 35 17 chr2 221985386 221985501 -28702353 + MIR SINE MIR 22 138 -70 23 68 0 0 chr2 221985925 221985969 -28701885 + AT_rich Low_complexity Low_complexity 1 44 0 2116 151 6 0 chr2 221985996 221986333 -28701521 - MER2 DNA MER2_type -1 343 5 2199 99 14 3 chr2 221987635 221987928 -28699926 + AluSx SINE Alu 1 296 -16 506 257 189 0 chr2 221988132 221988307 -28699547 - MIR SINE MIR -44 218 11 215 188 51 26 chr2 221989848 221989965 -28697889 + (TA)n Simple_repeat Simple_repeat 1 120 0 296 270 75 38 chr2 221990066 221990225 -28697629 + MIR3 SINE MIR 20 184 -24 2230 92 0 7 chr2 221990752 221991075 -28696779 + AluY SINE Alu 1 311 0 2061 170 8 18 chr2 221991123 221991517 -28696337 + MLT1B LTR MaLR 1 390 0 2130 101 16 3 chr2 221992160 221992467 -28695387 - AluY SINE Alu 0 311 1 326 284 96 49 chr2 221993120 221993186 -28694668 - MIR SINE MIR -7 255 194 2403 86 0 13 chr2 221993186 221993501 -28694353 - AluY SINE Alu 0 311 1 326 284 96 49 chr2 221993501 221993676 -28694178 - MIR SINE MIR -68 194 8 1833 166 54 9 chr2 221993691 221994040 -28693814 - MLT1A1 LTR MaLR 0 365 1 1777 160 40 24 chr2 221994370 221994744 -28693110 - MLT1B LTR MaLR 0 390 11 2135 116 11 53 chr2 221995470 221995850 -28692004 + THE1B LTR MaLR 1 364 0 1173 191 107 11 chr2 221995890 221996245 -28691609 - Charlie5 DNA MER1_type 0 2624 2236 42 0 0 0 chr2 221996247 221996289 -28691565 + AT_rich Low_complexity Low_complexity 1 42 0 478 310 76 11 chr2 221996491 221996675 -28691179 + MIR3 SINE MIR 3 198 -10 215 30 0 30 chr2 221997625 221997658 -28690196 + (TA)n Simple_repeat Simple_repeat 2 33 0 604 254 153 3 chr2 221997671 221997999 -28689855 + MLT2C1 LTR ERVL 17 663 0 344 279 168 34 chr2 221997999 221998207 -28689647 - L1ME4a LINE L1 -216 5905 5670 31 0 0 0 chr2 221998315 221998346 -28689508 + AT_rich Low_complexity Low_complexity 1 31 0 365 195 17 17 chr2 221998390 221998508 -28689346 + (TA)n Simple_repeat Simple_repeat 1 118 0 1079 199 40 117 chr2 221998557 221998597 -28689257 - MLT2C1 LTR ERVL 0 397 355 273 29 0 0 chr2 221998597 221998631 -28689223 + (TG)n Simple_repeat Simple_repeat 1 34 0 1079 199 40 117 chr2 221998631 221998819 -28689035 - MLT2C1 LTR ERVL -42 355 215 660 200 0 0 chr2 221998819 221998949 -28688905 + L1PB4 LINE L1 6027 6156 0 1079 199 40 117 chr2 221998949 221999147 -28688707 - MLT2C1 LTR ERVL -182 215 3 339 353 62 44 chr2 221999792 222000132 -28687722 - L2 LINE L2 -558 2756 2411 258 328 0 0 chr2 222000409 222000473 -28687381 - MER5B DNA MER1_type -57 121 58 796 139 39 8 chr2 222000747 222000876 -28686978 - FLAM_A SINE Alu 0 133 1 835 212 89 10 chr2 222001257 222001460 -28686394 - MER20 DNA MER1_type 0 219 1 552 114 0 0 chr2 222001684 222001763 -28686091 + AluS SINE Alu 223 301 -11 273 0 0 0 chr2 222002004 222002036 -28685818 - L1PA7 LINE L1 -266 5865 5834 2111 79 0 4 chr2 222002037 222002317 -28685537 + L1PA7 LINE L1 5868 6146 -8 1061 256 67 54 chr2 222002599 222003095 -28684759 + LTR33A LTR ERVL 1 502 -21 2300 95 0 0 chr2 222003389 222003683 -28684171 + AluSg SINE Alu 6 299 -11 189 364 136 9 chr2 222003884 222003994 -28683860 - L2 LINE L2 -2 3311 3188 2349 70 3 32 chr2 222004618 222004931 -28682923 - AluSg1 SINE Alu -5 304 1 231 239 0 0 chr2 222005059 222005126 -28682728 + (TATG)n Simple_repeat Simple_repeat 2 68 0 266 408 24 0 chr2 222005418 222005543 -28682311 + L2 LINE L2 3143 3270 -2 216 255 0 0 chr2 222008372 222008419 -28679435 + (TTCA)n Simple_repeat Simple_repeat 1 47 0 1097 297 98 35 chr2 222008459 222008559 -28679295 + L2 LINE L2 2359 2451 -863 2304 93 3 10 chr2 222008559 222008870 -28678984 - AluSq SINE Alu -4 309 1 1097 297 98 35 chr2 222008870 222009338 -28678516 + L2 LINE L2 2451 2963 -351 1968 99 42 3 chr2 222011188 222011493 -28676361 + AluSq SINE Alu 1 313 0 520 272 27 65 chr2 222011645 222011829 -28676025 - MER45A DNA AcHobo -1 177 1 2047 134 0 0 chr2 222012121 222012444 -28675410 - AluSx SINE Alu 0 323 1 353 250 56 0 chr2 222012460 222012532 -28675322 - L2 LINE L2 -46 3267 3192 2312 105 3 0 chr2 222012971 222013276 -28674578 - AluSp SINE Alu -3 310 5 2176 133 0 0 chr2 222015045 222015346 -28672508 + AluSx SINE Alu 1 301 -11 645 290 103 64 chr2 222015443 222015972 -28671882 + L1MC5 LINE L1 4718 5252 -894 2109 246 60 14 chr2 222015974 222016610 -28671244 + L1MC5 LINE L1 5255 5929 -1879 1842 190 34 6 chr2 222016610 222016963 -28670891 - MLT1A1 LTR MaLR 0 365 3 2109 246 60 14 chr2 222016963 222017047 -28670807 + L1MC5 LINE L1 5929 6008 -1800 825 241 63 72 chr2 222017475 222018034 -28669820 + L1MC5 LINE L1 6536 7006 -802 688 236 11 22 chr2 222018048 222018279 -28669575 + L1MC5 LINE L1 7026 7252 -728 253 306 0 0 chr2 222018313 222018398 -28669456 + L1MC4 LINE L1 7360 7444 -598 482 234 0 35 chr2 222018409 222018554 -28669300 + L1MC5 LINE L1 7304 7443 -518 1173 242 12 8 chr2 222018705 222019029 -28668825 + MER93b LTR ERV1 70 373 0 583 240 71 33 chr2 222019097 222019434 -28668420 + L1MC5 LINE L1 7534 7883 -78 21 0 0 0 chr2 222021503 222021524 -28666330 + AT_rich Low_complexity Low_complexity 1 21 0 200 262 58 87 chr2 222022056 222022159 -28665695 - MIR SINE MIR -128 134 35 1652 212 41 45 chr2 222022518 222022628 -28665226 - Charlie4a DNA MER1_type -1453 508 399 1706 180 25 0 chr2 222022628 222022912 -28664942 + AluJb SINE Alu 11 301 -11 1652 212 41 45 chr2 222022912 222023130 -28664724 - Charlie4a DNA MER1_type -1562 399 180 2098 59 4 0 chr2 222023130 222023401 -28664453 + L1PA5 LINE L1 5881 6152 -2 1652 212 41 45 chr2 222023401 222023581 -28664273 - Charlie4a DNA MER1_type -1781 180 1 957 244 15 0 chr2 222024722 222024927 -28662927 + MER63A DNA MER1_type 2 209 -1 227 343 244 28 chr2 222025468 222025681 -28662173 - L3 LINE CR1 -1134 443 185 1178 205 4 11 chr2 222025779 222026042 -28661812 - L1MB8 LINE L1 -14 6164 5904 239 128 0 0 chr2 222026053 222026092 -28661762 - MADE1 DNA Mariner -40 40 2 455 161 0 0 chr2 222026093 222026174 -28661680 - L1MB8 LINE L1 -272 5906 5826 1306 225 33 18 chr2 222026203 222026594 -28661260 - L1MB8 LINE L1 -906 5240 4844 518 335 122 8 chr2 222026762 222027016 -28660838 + L3 LINE CR1 604 886 -691 207 0 0 0 chr2 222027211 222027234 -28660620 + (TA)n Simple_repeat Simple_repeat 2 24 0 3050 122 23 88 chr2 222027234 222027447 -28660407 + Tigger3(Golem) DNA MER2_type 3 228 -2801 2221 129 0 3 chr2 222027447 222027749 -28660105 + AluSx SINE Alu 1 301 -11 3050 122 23 88 chr2 222027749 222027964 -28659890 + Tigger3(Golem) DNA MER2_type 228 455 -2574 2285 112 0 13 chr2 222027964 222028277 -28659577 + AluSq SINE Alu 1 309 -4 3050 122 23 88 chr2 222028277 222028476 -28659378 + Tigger3(Golem) DNA MER2_type 455 665 -2364 1582 191 32 11 chr2 222028476 222028759 -28659095 + AluJo SINE Alu 1 289 -23 3050 122 23 88 chr2 222028759 222029126 -28658728 + Tigger3(Golem) DNA MER2_type 665 2728 -301 3463 73 48 0 chr2 222029330 222029623 -28658231 - LTR49 LTR ERV1 -5 590 343 7518 127 16 43 chr2 222029623 222030259 -28657595 + HSMAR2 DNA Mariner 2 585 -717 1765 175 3 0 chr2 222030259 222030544 -28657310 - AluSx SINE Alu -26 286 1 7518 127 16 43 chr2 222030544 222031243 -28656611 + HSMAR2 DNA Mariner 585 1301 -1 3463 73 48 0 chr2 222031243 222031592 -28656262 - LTR49 LTR ERV1 -252 343 1 588 324 131 47 chr2 222031748 222032153 -28655701 + L3 LINE CR1 1065 1503 -74 282 29 0 0 chr2 222033004 222033039 -28654815 + (CA)n Simple_repeat Simple_repeat 2 36 0 376 326 76 0 chr2 222033685 222033829 -28654025 + MIR SINE MIR 51 205 -57 24 77 0 0 chr2 222033885 222033937 -28653917 + AT_rich Low_complexity Low_complexity 1 52 0 3361 167 16 9 chr2 222034522 222035027 -28652827 + MLT2B3 LTR ERVL 1 512 -42 554 41 14 0 chr2 222035027 222035100 -28652754 + (TCTA)n Simple_repeat Simple_repeat 3 76 0 3361 167 16 9 chr2 222035100 222035144 -28652710 + MLT2B3 LTR ERVL 512 554 0 452 395 75 22 chr2 222035194 222035607 -28652247 + L2 LINE L2 2838 3272 0 325 215 46 62 chr2 222037373 222037503 -28650351 + MER112 DNA MER1_type 8 135 -125 2013 281 63 30 chr2 222037504 222038234 -28649620 - L2 LINE L2 -391 2923 2170 723 293 42 39 chr2 222038249 222038560 -28649294 - LTR16C LTR ERVL 0 491 180 614 254 237 9 chr2 222038658 222039004 -28648850 - L2 LINE L2 -1164 2150 1726 1945 165 3 0 chr2 222039291 222039588 -28648266 + AluSx SINE Alu 1 298 -14 276 53 0 0 chr2 222040531 222040569 -28647285 + (TG)n Simple_repeat Simple_repeat 1 38 0 2749 95 31 5 chr2 222040631 222041019 -28646835 + MLT2A1 LTR ERVL 1 398 -46 198 0 0 0 chr2 222041019 222041041 -28646813 + (TG)n Simple_repeat Simple_repeat 2 23 0 345 287 0 0 chr2 222041067 222041154 -28646700 - L1MC4 LINE L1 -1339 6703 6617 565 81 14 0 chr2 222041162 222041236 -28646618 - MLT1B LTR MaLR -315 75 1 210 216 0 0 chr2 222041249 222041286 -28646568 + (TG)n Simple_repeat Simple_repeat 1 37 0 225 253 22 22 chr2 222041286 222041377 -28646477 - L1MC4 LINE L1 -1340 6702 6612 237 65 0 0 chr2 222041443 222041474 -28646380 + (CA)n Simple_repeat Simple_repeat 2 32 0 241 25 100 25 chr2 222041476 222041516 -28646338 + MLT2A2 LTR ERVL 411 453 0 363 260 78 134 chr2 222041700 222042035 -28645819 - MER102b DNA MER1_type -25 316 1 559 237 23 23 chr2 222042196 222042327 -28645527 + L1ME3 LINE L1 6003 6133 -29 464 224 22 34 chr2 222042351 222042530 -28645324 + (TA)n Simple_repeat Simple_repeat 1 177 0 408 187 35 29 chr2 222042569 222043070 -28644784 + (TA)n Simple_repeat Simple_repeat 1 503 0 229 333 31 0 chr2 222043673 222043769 -28644085 - MIR SINE MIR -80 128 30 278 314 84 13 chr2 222043970 222044209 -28643645 + L1ME4a LINE L1 5855 6110 -11 2274 110 0 0 chr2 222045284 222045584 -28642270 + AluSx SINE Alu 1 300 -12 231 36 0 0 chr2 222046379 222046407 -28641447 + (TG)n Simple_repeat Simple_repeat 1 28 0 24 0 0 0 chr2 222047659 222047683 -28640171 + AT_rich Low_complexity Low_complexity 1 24 0 1382 95 25 5 chr2 222047683 222047883 -28639971 + AluY SINE Alu 98 301 -10 200 191 106 21 chr2 222052767 222052814 -28635040 + MIR SINE MIR 58 108 -100 773 182 39 7 chr2 222053199 222053353 -28634501 - MER5A DNA MER1_type -1 188 30 1748 187 3 0 chr2 222053753 222054053 -28633801 + AluJo SINE Alu 1 301 -11 3116 249 56 31 chr2 222054110 222056146 -28631708 + L1ME LINE L1 732 2807 -3273 440 235 117 10 chr2 222056266 222056462 -28631392 + L1ME LINE L1 2674 2890 -3190 235 254 127 16 chr2 222056446 222056572 -28631282 + L1M4 LINE L1 5010 5149 -997 * 1041 175 0 85 chr2 222056608 222056831 -28631023 - MER20 DNA MER1_type 0 219 16 481 290 118 22 chr2 222056949 222056966 -28630888 - L1ME LINE L1 -432 5689 5675 350 21 0 21 chr2 222056966 222057014 -28630840 + (TG)n Simple_repeat Simple_repeat 1 47 0 481 290 118 22 chr2 222057014 222057683 -28630171 - L1ME LINE L1 -446 5675 4911 447 320 103 24 chr2 222057739 222058438 -28629416 - L1ME LINE L1 -1329 4817 4064 22 0 0 0 chr2 222058450 222058472 -28629382 + AT_rich Low_complexity Low_complexity 1 22 0 246 32 0 0 chr2 222058726 222058757 -28629097 + (TC)n Simple_repeat Simple_repeat 2 32 0 1678 173 14 21 chr2 222058760 222059044 -28628810 - AluJo SINE Alu -30 282 1 364 232 111 40 chr2 222059232 222059331 -28628523 - MER5B DNA MER1_type -3 175 70 192 40 0 0 chr2 222059856 222059881 -28627973 + (A)n Simple_repeat Simple_repeat 1 25 0 447 68 0 0 chr2 222060073 222060132 -28627722 + (TG)n Simple_repeat Simple_repeat 2 60 0 2771 145 4 4 chr2 222060730 222061186 -28626668 + L1MA8 LINE L1 5328 5783 -508 1542 95 40 40 chr2 222061164 222061437 -28626417 + L1MA3 LINE L1 6033 6305 0 * 2358 163 31 23 chr2 222061467 222061983 -28625871 + L1MA8 LINE L1 5769 6288 -3 22 0 0 0 chr2 222061983 222062005 -28625849 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 222062035 222062057 -28625797 + AT_rich Low_complexity Low_complexity 1 22 0 212 273 0 0 chr2 222062096 222062140 -28625714 - MIR SINE MIR -83 125 82 1460 91 26 13 chr2 222062502 222062732 -28625122 + L1PA11 LINE L1 5940 6172 -2 382 289 47 31 chr2 222064401 222064529 -28623325 - L2 LINE L2 0 3313 3184 226 269 0 19 chr2 222064637 222064689 -28623165 - L2 LINE L2 -12 3301 3251 2081 113 0 3 chr2 222064855 222065223 -28622631 + AluSg SINE Alu 1 367 0 290 312 9 37 chr2 222065423 222065532 -28622322 - L2 LINE L2 -5 3308 3203 2019 211 121 12 chr2 222066431 222067010 -28620844 - LTR48B LTR ERV1 -2 642 1 453 272 167 0 chr2 222068549 222068711 -28619143 + MIR SINE MIR 73 261 -1 2107 94 50 7 chr2 222068795 222069093 -28618761 - AluSq SINE Alu -2 311 1 860 197 56 11 chr2 222069097 222069275 -28618579 - MER20 DNA MER1_type -4 215 30 363 174 22 11 chr2 222069492 222069584 -28618270 + GA-rich Low_complexity Low_complexity 2 94 0 180 0 0 0 chr2 222070583 222070603 -28617251 + (TC)n Simple_repeat Simple_repeat 1 20 0 1048 144 0 0 chr2 222070603 222070756 -28617098 - AluSg/x SINE Alu -15 297 145 303 71 0 0 chr2 222070916 222070958 -28616896 + (TG)n Simple_repeat Simple_repeat 1 42 0 1602 194 23 3 chr2 222071188 222071492 -28616362 - AluJb SINE Alu -2 310 1 613 164 0 0 chr2 222071492 222071596 -28616258 - AluJo SINE Alu -177 135 32 966 276 101 34 chr2 222072337 222072812 -28615042 - MLT1J LTR MaLR 0 511 5 2089 97 28 3 chr2 222073169 222073458 -28614396 - AluSg SINE Alu -14 296 1 1340 185 4 0 chr2 222073627 222073876 -28613978 + L1MB5 LINE L1 5925 6174 0 308 289 24 43 chr2 222075042 222075156 -28612698 - MIR SINE MIR -84 124 3 519 339 139 53 chr2 222075176 222075965 -28611889 - L2 LINE L2 -195 3077 2226 204 40 0 0 chr2 222075989 222076014 -28611840 + (A)n Simple_repeat Simple_repeat 1 25 0 253 315 31 23 chr2 222076026 222076156 -28611698 - L2 LINE L2 -499 2815 2685 4016 143 103 25 chr2 222076525 222077334 -28610520 + L1MA7 LINE L1 5417 6288 -3 1791 124 77 0 chr2 222077347 222077621 -28610233 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr2 222078855 222078878 -28608976 + AT_rich Low_complexity Low_complexity 1 23 0 1886 88 36 0 chr2 222079545 222079794 -28608060 - AluSc SINE Alu -15 294 37 237 197 0 0 chr2 222080116 222080177 -28607677 + CT-rich Low_complexity Low_complexity 2 62 0 587 276 102 17 chr2 222080349 222080711 -28607143 - L1MEd LINE L1 -3432 2697 2305 1362 236 87 15 chr2 222080734 222081069 -28606785 - MLT1F LTR MaLR 0 542 184 236 237 0 140 chr2 222081145 222081171 -28606683 - MLT1F LTR MaLR -487 80 52 1929 169 3 0 chr2 222081171 222081473 -28606381 - AluJb SINE Alu -9 303 1 236 237 0 140 chr2 222081473 222081539 -28606315 - MLT1F LTR MaLR -515 52 1 323 287 54 0 chr2 222081552 222081681 -28606173 - L1MEd LINE L1 -3862 2267 2132 353 325 168 0 chr2 222081941 222082138 -28605716 - L1MEd LINE L1 -5423 696 467 787 139 39 8 chr2 222082325 222082454 -28605400 - FLAM_A SINE Alu 0 133 1 838 222 84 5 chr2 222082835 222083038 -28604816 - MER20 DNA MER1_type 0 219 1 549 114 0 0 chr2 222083262 222083341 -28604513 + AluS SINE Alu 221 299 -11 286 0 0 0 chr2 222083582 222083614 -28604240 - L1PA7 LINE L1 -266 5865 5834 2102 79 0 4 chr2 222083615 222083895 -28603959 + L1PA7 LINE L1 5868 6146 -8 1216 256 67 54 chr2 222084177 222084673 -28603181 + LTR33A LTR ERVL 1 502 -21 2291 95 0 0 chr2 222084967 222085261 -28602593 + AluSg SINE Alu 6 299 -11 192 364 136 9 chr2 222085462 222085572 -28602282 - L2 LINE L2 -2 3311 3188 1051 106 6 59 chr2 222086195 222086365 -28601489 - AluSg/x SINE Alu -7 305 145 303 71 0 0 chr2 222086525 222086567 -28601287 + (TG)n Simple_repeat Simple_repeat 1 42 0 1602 194 23 3 chr2 222086797 222087101 -28600753 - AluJb SINE Alu -2 310 1 613 164 0 0 chr2 222087101 222087205 -28600649 - AluJo SINE Alu -177 135 32 966 276 101 34 chr2 222087946 222088421 -28599433 - MLT1J LTR MaLR 0 511 5 2089 97 28 3 chr2 222088778 222089067 -28598787 - AluSg SINE Alu -14 296 1 1107 193 29 0 chr2 222089236 222089479 -28598375 + L1MB5 LINE L1 5925 6174 0 622 262 60 44 chr2 222289503 222289984 -28397870 - L1ME LINE L1 -5056 1014 526 831 266 70 82 chr2 222290121 222290633 -28397221 - L1ME LINE L1 -5552 518 13 3169 168 6 4 chr2 222290708 222291226 -28396628 + MLT2B1 LTR ERVL 2 520 0 1913 107 38 0 chr2 222294341 222294602 -28393252 + AluSp SINE Alu 1 271 -42 225 0 0 0 chr2 222294635 222294660 -28393194 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 247 24 0 48 chr2 222294659 222294701 -28393153 + (TA)n Simple_repeat Simple_repeat 1 40 0 1919 178 122 32 chr2 222295551 222296161 -28391693 - MER39 LTR ERV1 0 707 2 264 59 0 0 chr2 222296432 222296466 -28391388 + (GA)n Simple_repeat Simple_repeat 1 34 0 1531 171 7 25 chr2 222296641 222296927 -28390927 - AluJo SINE Alu -22 290 10 454 285 97 50 chr2 222296972 222297312 -28390542 - L1ME3A LINE L1 -256 5914 5559 402 245 102 36 chr2 222297321 222297517 -28390337 + L2 LINE L2 2646 2854 -460 299 346 9 9 chr2 222297617 222297724 -28390130 + L2 LINE L2 3193 3299 -14 466 226 32 0 chr2 222297847 222297940 -28389914 + L2 LINE L2 3160 3255 -17 213 39 0 0 chr2 222297942 222297968 -28389886 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 261 255 92 31 chr2 222298210 222298308 -28389546 + MER5B DNA MER1_type 2 105 -73 217 228 33 98 chr2 222299716 222299808 -28388046 + MIR SINE MIR 110 195 -67 958 166 19 33 chr2 222299941 222300152 -28387702 - MER3 DNA MER1_type -1 208 1 866 140 6 17 chr2 222301658 222301836 -28386018 + CT-rich Low_complexity Low_complexity 3 178 0 807 41 0 0 chr2 222302071 222302168 -28385686 - AluY SINE Alu -210 101 5 1181 46 13 7 chr2 222302168 222302321 -28385533 + AluY SINE Alu 148 301 -10 1281 105 5 34 chr2 222302902 222303111 -28384743 + L1PB3 LINE L1 5575 5777 -377 259 318 29 0 chr2 222303203 222303376 -28384478 + (TA)n Simple_repeat Simple_repeat 2 179 0 351 0 0 0 chr2 222303380 222303419 -28384435 + (CA)n Simple_repeat Simple_repeat 2 40 0 2298 133 3 3 chr2 222303420 222303781 -28384073 + L1PB3 LINE L1 5793 6153 -1 24 0 0 0 chr2 222303781 222303805 -28384049 + AT_rich Low_complexity Low_complexity 1 24 0 331 294 44 56 chr2 222303951 222304131 -28383723 - L1ME3A LINE L1 -208 5945 5768 515 258 127 56 chr2 222304146 222304359 -28383495 - L2 LINE L2 -11 3302 3075 369 301 45 58 chr2 222304419 222304801 -28383053 - L1ME3A LINE L1 -2019 4110 3734 1969 136 31 0 chr2 222304837 222305124 -28382730 - AluSx SINE Alu -16 296 1 2294 93 10 0 chr2 222305203 222305513 -28382341 - AluSq SINE Alu 0 313 1 1525 200 85 47 chr2 222305691 222306140 -28381714 - MLT1C LTR MaLR -1 466 1 2214 126 3 0 chr2 222306165 222306474 -28381380 - AluSx SINE Alu -2 310 1 961 119 0 8 chr2 222306474 222306608 -28381246 - AluSq/x SINE Alu -178 135 3 377 290 212 12 chr2 222306627 222306882 -28380972 - L1ME3A LINE L1 -2686 3443 3138 609 259 79 60 chr2 222306916 222307232 -28380622 - L1ME1 LINE L1 -5 6161 5840 301 287 97 17 chr2 222307235 222307472 -28380382 - L1ME3A LINE L1 -5024 1095 840 505 245 145 52 chr2 222309370 222309477 -28378377 + MER102b DNA MER1_type 55 151 -1277 2227 105 3 7 chr2 222309477 222309783 -28378071 + AluSq SINE Alu 1 305 -8 505 245 145 52 chr2 222309783 222309924 -28377930 + MER102b DNA MER1_type 151 326 -15 623 213 133 27 chr2 222309968 222310156 -28377698 - L2 LINE L2 0 3313 3106 430 231 111 9 chr2 222310181 222310289 -28377565 + MLT1I LTR MaLR 52 170 -239 285 270 40 0 chr2 222310417 222310491 -28377363 + MLT1I LTR MaLR 328 404 -5 445 318 18 12 chr2 222310492 222310662 -28377192 - L2 LINE L2 -199 3114 2944 22 56 0 0 chr2 222311196 222311232 -28376622 + AT_rich Low_complexity Low_complexity 1 36 0 229 125 0 0 chr2 222313956 222313996 -28373858 + MADE1 DNA Mariner 41 80 0 836 263 123 22 chr2 222313996 222314453 -28373401 - L1MEc LINE L1 -4460 1936 1434 23 68 0 0 chr2 222314885 222314929 -28372925 + AT_rich Low_complexity Low_complexity 1 44 0 2131 206 119 12 chr2 222315599 222316178 -28371676 + MLT1E1 LTR MaLR 8 648 -6 282 282 78 19 chr2 222316193 222316296 -28371558 + L2 LINE L2 3162 3270 -2 203 310 43 52 chr2 222317318 222317434 -28370420 - MIR SINE MIR -32 230 116 233 309 199 25 chr2 222317445 222317646 -28370208 + MIR SINE MIR 17 252 -10 229 333 31 0 chr2 222317649 222317745 -28370109 - MIR SINE MIR -80 128 30 278 314 84 13 chr2 222317946 222318185 -28369669 + L1ME4a LINE L1 5855 6110 -11 2311 106 0 0 chr2 222319260 222319562 -28368292 + AluSx SINE Alu 1 302 -10 267 31 0 0 chr2 222320357 222320389 -28367465 + (TG)n Simple_repeat Simple_repeat 1 32 0 24 0 0 0 chr2 222321641 222321665 -28366189 + AT_rich Low_complexity Low_complexity 1 24 0 1382 95 25 5 chr2 222321665 222321865 -28365989 + AluY SINE Alu 98 301 -10 200 191 106 21 chr2 222326750 222326797 -28361057 + MIR SINE MIR 58 108 -100 773 182 39 7 chr2 222327182 222327336 -28360518 - MER5A DNA MER1_type -1 188 30 1734 190 3 0 chr2 222327736 222328036 -28359818 + AluJo SINE Alu 1 301 -11 3129 247 60 30 chr2 222328093 222330198 -28357656 + L1ME LINE L1 732 2890 -3190 235 254 127 16 chr2 222330182 222330308 -28357546 + L1M4 LINE L1 5010 5149 -997 * 1041 175 0 85 chr2 222330344 222330567 -28357287 - MER20 DNA MER1_type 0 219 16 466 292 111 18 chr2 222330631 222330702 -28357152 - L1MC/D LINE L1 -432 5689 5626 278 25 0 25 chr2 222330702 222330742 -28357112 + (TG)n Simple_repeat Simple_repeat 1 39 0 466 292 111 18 chr2 222330742 222331411 -28356443 - L1MC/D LINE L1 -495 5626 4911 435 325 102 21 chr2 222331467 222332165 -28355689 - L1MC/D LINE L1 -1329 4817 4064 22 0 0 0 chr2 222332177 222332199 -28355655 + AT_rich Low_complexity Low_complexity 1 22 0 246 32 0 0 chr2 222332453 222332484 -28355370 + (TC)n Simple_repeat Simple_repeat 2 32 0 1657 176 14 21 chr2 222332487 222332771 -28355083 - AluJo SINE Alu -30 282 1 364 232 111 40 chr2 222332959 222333058 -28354796 - MER5B DNA MER1_type -3 175 70 216 0 0 0 chr2 222333584 222333608 -28354246 + (A)n Simple_repeat Simple_repeat 1 24 0 375 78 0 0 chr2 222333907 222333958 -28353896 + (TG)n Simple_repeat Simple_repeat 2 52 0 2768 145 4 4 chr2 222334557 222335013 -28352841 + L1MA7 LINE L1 5328 5783 -508 1569 92 40 40 chr2 222334991 222335264 -28352590 + L1MA3 LINE L1 6033 6305 0 * 2265 161 37 39 chr2 222335294 222335811 -28352043 + L1MA7 LINE L1 5769 6284 -7 26 0 0 0 chr2 222335811 222335837 -28352017 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr2 222335867 222335889 -28351965 + AT_rich Low_complexity Low_complexity 1 22 0 212 273 0 0 chr2 222335928 222335972 -28351882 - MIR SINE MIR -83 125 82 1460 91 26 13 chr2 222336334 222336564 -28351290 + L1PA11 LINE L1 5940 6172 -2 382 289 47 31 chr2 222338233 222338361 -28349493 - L2 LINE L2 0 3313 3184 226 269 0 19 chr2 222338469 222338521 -28349333 - L2 LINE L2 -12 3301 3251 2039 114 4 4 chr2 222338687 222339030 -28348824 + AluSg SINE Alu 1 343 0 290 312 9 37 chr2 222339226 222339335 -28348519 - L2 LINE L2 -5 3308 3203 2019 211 121 12 chr2 222340234 222340813 -28347041 - LTR48B LTR ERV1 -2 642 1 449 272 167 0 chr2 222342352 222342514 -28345340 + MIR SINE MIR 73 261 -1 2130 91 50 7 chr2 222342598 222342895 -28344959 - AluSq SINE Alu -3 310 1 800 197 56 11 chr2 222342899 222343077 -28344777 - MER20 DNA MER1_type -4 215 30 363 174 22 11 chr2 222343294 222343386 -28344468 + GA-rich Low_complexity Low_complexity 2 94 0 180 0 0 0 chr2 222344385 222344405 -28343449 + (TC)n Simple_repeat Simple_repeat 1 20 0 1082 137 0 0 chr2 222344405 222344558 -28343296 - AluSg/x SINE Alu -15 295 143 375 60 0 0 chr2 222344718 222344768 -28343086 + (TG)n Simple_repeat Simple_repeat 1 50 0 1609 195 23 3 chr2 222344998 222345300 -28342554 - AluJb SINE Alu -4 308 1 617 164 0 0 chr2 222345300 222345404 -28342450 - AluJo SINE Alu -177 135 32 943 276 101 34 chr2 222346145 222346620 -28341234 - MLT1J LTR MaLR 0 511 5 2124 99 27 3 chr2 222346977 222347271 -28340583 - AluSg SINE Alu -9 301 1 1327 185 4 0 chr2 222347440 222347689 -28340165 + L1MB5 LINE L1 5925 6174 0 313 289 24 43 chr2 222348855 222348969 -28338885 - MIR SINE MIR -84 124 3 536 337 139 53 chr2 222348989 222349778 -28338076 - L2 LINE L2 -195 3077 2226 195 42 0 0 chr2 222349802 222349826 -28338028 + (A)n Simple_repeat Simple_repeat 1 24 0 252 315 31 23 chr2 222349838 222349968 -28337886 - L2 LINE L2 -499 2815 2685 2396 141 113 11 chr2 222350337 222350813 -28337041 + L1MA7 LINE L1 5417 5941 -350 23 86 0 0 chr2 222351104 222351162 -28336692 + AT_rich Low_complexity Low_complexity 1 58 0 192 398 9 18 chr2 222351185 222351298 -28336556 + L2 LINE L2 3155 3266 -6 314 352 41 32 chr2 222351339 222351683 -28336171 + L1PA15 LINE L1 7 353 -7228 16870 189 10 14 chr2 222352487 222357408 -28330446 + L1PA15 LINE L1 2319 7219 -384 517 101 0 13 chr2 222357408 222357487 -28330367 - MADE1 DNA Mariner -2 78 1 16870 189 10 14 chr2 222357487 222357867 -28329987 + L1PA15 LINE L1 7219 7599 -4 388 92 67 0 chr2 222357916 222358035 -28329819 + (TA)n Simple_repeat Simple_repeat 2 128 0 228 233 81 0 chr2 222358704 222358790 -28329064 - L1ME4a LINE L1 -69 6052 5960 207 88 0 0 chr2 222358801 222358835 -28329019 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 10507 174 43 24 chr2 222358976 222361341 -28326513 - L1MC3 LINE L1 -159 7626 5218 480 292 127 41 chr2 222361390 222361681 -28326173 - L1ME4a LINE L1 -237 5884 5569 22 0 0 30 chr2 222362145 222362165 -28325689 + AT_rich Low_complexity Low_complexity 1 21 -11 1222 47 0 0 chr2 222362165 222362314 -28325540 - L1PA6 LINE L1 -5 6149 6001 22 0 0 30 chr2 222362314 222362326 -28325528 + AT_rich Low_complexity Low_complexity 21 32 0 2242 101 3 7 chr2 222363457 222363763 -28324091 + AluSg SINE Alu 1 305 -5 441 270 101 13 chr2 222364060 222364219 -28323635 - MIR SINE MIR -43 219 47 182 316 13 26 chr2 222364472 222364548 -28323306 + L2 LINE L2 449 523 -2791 22 0 0 0 chr2 222364835 222364857 -28322997 + AT_rich Low_complexity Low_complexity 1 22 0 422 297 72 0 chr2 222365251 222365389 -28322465 - L2 LINE L2 -4 3268 3121 3763 101 35 0 chr2 222369040 222369575 -28318279 + MER41A LTR ERV1 1 554 0 496 247 48 7 chr2 222369578 222369724 -28318130 - MLT1I LTR MaLR -11 398 247 919 154 116 13 chr2 222370144 222370377 -28317477 + L1MA7 LINE L1 6032 6288 -3 1788 128 77 0 chr2 222370390 222370664 -28317190 + AluSx SINE Alu 1 295 -17 28 0 0 0 chr2 222371894 222371922 -28315932 + AT_rich Low_complexity Low_complexity 1 28 0 1893 95 36 0 chr2 222372589 222372841 -28315013 - AluSc SINE Alu -12 297 37 234 193 0 0 chr2 222373162 222373219 -28314635 + CT-rich Low_complexity Low_complexity 2 58 0 518 274 102 17 chr2 222373391 222373753 -28314101 - L1MEd LINE L1 -3432 2697 2305 1252 236 87 15 chr2 222373776 222374111 -28313743 - MLT1F LTR MaLR 0 542 184 1961 169 3 0 chr2 222374213 222374515 -28313339 - AluJb SINE Alu -9 303 1 292 287 54 0 chr2 222374594 222374723 -28313131 - L1MEd LINE L1 -3862 2267 2132 349 362 126 3 chr2 222374983 222375317 -28312537 - L1MEd LINE L1 -5423 696 322 664 273 9 66 chr2 222375550 222375884 -28311970 + L1MDb LINE L1 794 1108 -5301 453 250 151 12 chr2 222376206 222376378 -28311476 - MLT1L LTR MaLR 0 615 420 2559 55 0 6 chr2 222376571 222376883 -28310971 + AluY SINE Alu 1 310 -1 383 202 0 67 chr2 222376968 222377072 -28310782 - LTR33 LTR ERVL 0 521 425 2293 75 3 0 chr2 222377073 222377365 -28310489 + AluSc SINE Alu 1 293 -16 897 185 98 0 chr2 222377509 222377693 -28310161 - MER58B DNA MER1_type 0 341 140 659 133 0 9 chr2 222377694 222377799 -28310055 + AluSg/x SINE Alu 198 301 -8 279 277 128 0 chr2 222377807 222377901 -28309953 - MER58B DNA MER1_type -234 107 2 588 278 158 13 chr2 222377910 222378144 -28309710 - LTR33 LTR ERVL -253 268 1 1798 176 19 7 chr2 222378728 222379035 -28308819 + AluJb SINE Alu 1 311 -1 2207 129 0 0 chr2 222379343 222379645 -28308209 - AluSx SINE Alu 0 312 11 310 228 152 0 chr2 222379689 222379781 -28308073 + L2 LINE L2 3208 3313 0 1689 162 14 58 chr2 222380917 222381281 -28306573 - MLT1B LTR MaLR -11 379 32 183 208 38 57 chr2 222381446 222381499 -28306355 - L2 LINE L2 0 3313 3262 198 0 0 0 chr2 222382364 222382386 -28305468 + (CA)n Simple_repeat Simple_repeat 2 23 0 907 215 0 0 chr2 222383519 222383691 -28304163 + FRAM SINE Alu 1 172 -4 1327 225 53 3 chr2 222383691 222383976 -28303878 - MLT1A1 LTR MaLR -66 299 1 210 71 0 0 chr2 222384242 222384270 -28303584 + (T)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 222384288 222384310 -28303544 + AT_rich Low_complexity Low_complexity 1 22 0 338 271 0 31 chr2 222384950 222385046 -28302808 + MIR SINE MIR 170 262 0 363 23 0 0 chr2 222385291 222385335 -28302519 + (CA)n Simple_repeat Simple_repeat 2 45 0 1490 160 0 13 chr2 222386299 222386537 -28301317 - AluJb SINE Alu -8 304 70 625 283 57 22 chr2 222387561 222387791 -28300063 + MIR SINE MIR 25 262 0 320 238 12 12 chr2 222388625 222388705 -28299149 + GA-rich Low_complexity Low_complexity 3 82 0 2362 101 0 7 chr2 222390264 222390570 -28297284 + AluSx SINE Alu 4 307 -5 413 267 101 5 chr2 222390955 222391121 -28296733 - MIR SINE MIR -60 202 18 303 71 0 0 chr2 222391595 222391637 -28296217 + (CA)n Simple_repeat Simple_repeat 2 43 0 970 242 50 3 chr2 222393964 222394261 -28293593 + MER113 DNA MER1_type? 144 454 -67 323 347 126 12 chr2 222394342 222394509 -28293345 + MER5A DNA MER1_type 1 186 -3 372 307 101 41 chr2 222394702 222394920 -28292934 + L1ME LINE L1 5360 5590 -531 647 141 25 8 chr2 222394999 222395120 -28292734 + L1MB4 LINE L1 6053 6175 -5 2236 106 3 3 chr2 222395181 222395492 -28292362 + AluSp SINE Alu 1 311 -2 857 134 20 0 chr2 222395773 222395922 -28291932 - MER30 DNA MER1_type -78 152 1 189 74 0 0 chr2 222395936 222395963 -28291891 + (A)n Simple_repeat Simple_repeat 1 27 0 4914 131 23 5 chr2 222396000 222396827 -28291027 - L1PB1 LINE L1 -3 6148 5307 1759 192 80 36 chr2 222396827 222397302 -28290552 - MLT1D LTR MaLR -9 496 1 195 162 0 0 chr2 222397308 222397345 -28290509 + A-rich Low_complexity Low_complexity 1 37 0 471 152 9 19 chr2 222397355 222397460 -28290394 + GA-rich Low_complexity Low_complexity 1 104 0 827 163 119 79 chr2 222398411 222398613 -28289241 - MER63A DNA MER1_type 0 210 1 333 308 103 13 chr2 222398713 222398937 -28288917 + L2 LINE L2 2997 3240 -73 261 324 40 57 chr2 222399719 222399895 -28287959 - L2 LINE L2 -201 3071 2899 1622 165 55 0 chr2 222400347 222400602 -28287252 + AluSx SINE Alu 14 282 -30 324 70 0 0 chr2 222400605 222400648 -28287206 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1206 200 0 0 chr2 222401276 222401486 -28286368 + AluJo SINE Alu 1 210 -102 512 334 45 43 chr2 222402200 222402897 -28284957 + L1MEd LINE L1 48 745 -5374 833 216 6 11 chr2 222402959 222403135 -28284719 - FRAM SINE Alu 0 40 1 324 293 73 7 chr2 222403263 222403413 -28284441 + L1MEd LINE L1 893 1052 -5067 341 152 106 0 chr2 222403474 222403540 -28284314 - MER39B LTR ERV1 -2 651 579 25 0 0 0 chr2 222403540 222403565 -28284289 + AT_rich Low_complexity Low_complexity 1 25 0 266 57 0 0 chr2 222403565 222403600 -28284254 - U7 snRNA snRNA -27 36 2 * 279 117 83 0 chr2 222403597 222403657 -28284197 - LTR49 LTR ERV1 -56 539 475 461 200 152 40 chr2 222403876 222404001 -28283853 + L2 LINE L2 3152 3290 -23 782 271 156 24 chr2 222404231 222404681 -28283173 - L2 LINE L2 -1 3312 2804 541 289 85 33 chr2 222404763 222405033 -28282821 + LTR16A LTR ERVL 56 339 -111 613 288 78 55 chr2 222405186 222405329 -28282525 + L1MC4a LINE L1 6578 6716 -1092 2259 84 3 20 chr2 222405329 222405626 -28282228 + AluSx SINE Alu 20 311 -1 613 288 78 55 chr2 222405626 222405791 -28282063 + L1MC4a LINE L1 6716 6893 -915 766 105 57 0 chr2 222405801 222405925 -28281929 + LTR24B LTR ERV1 439 569 -7 558 311 14 25 chr2 222405925 222406202 -28281652 + LTR24B-int LTR ERV1 1 274 -4849 209 56 0 28 chr2 222406215 222406251 -28281603 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1471 186 62 4 chr2 222406268 222406543 -28281311 - AluJo SINE Alu -21 291 1 180 0 0 0 chr2 222406691 222406711 -28281143 + (TG)n Simple_repeat Simple_repeat 2 21 0 3786 86 2 0 chr2 222406711 222407352 -28280502 - L1P5 LINE L1 -369 5782 5141 634 131 7 117 chr2 222407657 222407794 -28280060 + MER47A DNA MER2_type 2 123 -243 310 278 117 54 chr2 222408080 222408398 -28279456 + LTR33A LTR ERVL 88 439 -84 2294 135 80 10 chr2 222408398 222408797 -28279057 + MSTA LTR MaLR 1 427 -1 310 278 117 54 chr2 222408797 222408888 -28278966 + LTR33A LTR ERVL 439 523 0 378 185 56 124 chr2 222409724 222409874 -28277980 + MER5B DNA MER1_type 19 162 -16 325 250 34 0 chr2 222410564 222410652 -28277202 - Charlie7 DNA MER1_type -2521 91 1 230 283 43 22 chr2 222411311 222411403 -28276451 - MIR SINE MIR -92 116 23 341 311 29 0 chr2 222412024 222412127 -28275727 - MIR SINE MIR -61 147 42 617 70 20 20 chr2 222412294 222412394 -28275460 + LTR24B LTR ERV1 4 103 -473 943 134 7 7 chr2 222412400 222412542 -28275312 - FLAM_C SINE Alu -1 142 1 2820 128 23 17 chr2 222412548 222413023 -28274831 + LTR24B LTR ERV1 93 570 -6 202 250 0 0 chr2 222413311 222413355 -28274499 - L2 LINE L2 0 3272 3229 388 326 61 7 chr2 222414280 222414427 -28273427 - MIR SINE MIR -42 220 66 250 200 15 46 chr2 222415636 222415701 -28272153 - L2 LINE L2 -552 2762 2700 993 112 53 7 chr2 222415714 222415866 -28271988 + AluSg/x SINE Alu 133 291 -19 895 271 130 12 chr2 222415878 222416217 -28271637 - L2 LINE L2 -639 2675 2297 230 116 23 0 chr2 222416535 222416578 -28271276 + CT-rich Low_complexity Low_complexity 2 45 0 1508 174 45 3 chr2 222416735 222417022 -28270832 + MSTB LTR MaLR 1 299 -127 207 0 0 0 chr2 222417254 222417277 -28270577 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 10653 93 1 1 chr2 222418407 222419892 -28267962 + L1P3 LINE L1 2 1487 -4974 30 0 0 0 chr2 222421796 222421826 -28266028 + AT_rich Low_complexity Low_complexity 1 30 0 487 327 34 69 chr2 222423265 222423702 -28264152 + L1MC4a LINE L1 4810 5231 -915 1078 278 88 26 chr2 222423724 222424292 -28263562 + L1MC4a LINE L1 5258 5860 -1948 1606 162 30 40 chr2 222424390 222424693 -28263161 + AluSx SINE Alu 1 300 -12 252 351 20 20 chr2 222425455 222425606 -28262248 + PABL_B-int LTR ERV1 4065 4215 -3177 357 315 30 35 chr2 222426333 222426565 -28261289 + PABL_B-int LTR ERV1 2248 2478 -2169 269 298 84 38 chr2 222427196 222427327 -28260527 + PABL_B-int LTR ERV1 5633 5769 -1353 728 320 41 41 chr2 222427710 222428197 -28259657 + PABL_B-int LTR ERV1 6199 6685 -437 816 216 0 25 chr2 222429760 222429922 -28257932 - FRAM SINE Alu -18 158 1 1335 270 41 24 chr2 222430576 222430987 -28256867 - MLT1E LTR MaLR 0 593 176 919 238 112 53 chr2 222431012 222431423 -28256431 + MLT2B1 LTR ERVL 1 435 -85 406 199 56 42 chr2 222431469 222431613 -28256241 - MLT1E LTR MaLR -406 161 15 2051 119 0 0 chr2 222431735 222432013 -28255841 - AluSg SINE Alu -32 278 1 275 243 41 33 chr2 222432032 222432141 -28255713 - LTR48B LTR ERV1 -508 114 1 2241 141 115 7 chr2 222432903 222433322 -28254532 + MER31B LTR ERV1 3 466 0 621 247 41 6 chr2 222434600 222434770 -28253084 + LTR33 LTR ERVL 1 176 -345 726 129 16 8 chr2 222434999 222435123 -28252731 + MSTA LTR MaLR 304 428 0 395 244 17 0 chr2 222435524 222435643 -28252211 + HsTC2 DNA Tc2 1775 1895 -3 2290 107 0 0 chr2 222435721 222436019 -28251835 + AluY SINE Alu 1 298 -13 315 371 38 30 chr2 222436125 222436157 -28251697 - L2 LINE L2 -4 3268 3238 2451 158 12 28 chr2 222436157 222436587 -28251267 + MSTB LTR MaLR 2 424 -2 315 371 38 30 chr2 222436587 222436686 -28251168 - L2 LINE L2 -34 3238 3136 345 248 27 40 chr2 222438519 222438668 -28249186 + Charlie8 DNA MER1_type 35 181 -2236 1408 261 40 86 chr2 222439847 222440295 -28247559 - MER21B LTR ERV1 -149 714 312 1977 138 0 20 chr2 222440295 222440591 -28247263 - AluJo SINE Alu -22 290 1 1408 261 40 86 chr2 222440591 222440886 -28246968 - MER21B LTR ERV1 -551 312 5 21796 98 8 2 chr2 222441374 222445494 -28242360 - L1P LINE L1 -765 5381 1239 247 285 89 54 chr2 222445786 222445959 -28241895 + MIR3 SINE MIR 11 189 -63 222 37 0 0 chr2 222446486 222446513 -28241341 + (TC)n Simple_repeat Simple_repeat 2 28 0 1760 176 10 7 chr2 222446560 222446856 -28240998 - AluJo SINE Alu -11 301 5 2504 76 3 0 chr2 222448812 222449115 -28238739 - AluSp SINE Alu -9 304 1 1638 162 33 0 chr2 222449124 222449396 -28238458 - THE1B LTR MaLR -83 281 1 438 221 227 29 chr2 222450209 222450381 -28237473 + MLT1K LTR MaLR 18 223 -365 186 362 53 43 chr2 222450382 222450476 -28237378 + L2 LINE L2 3137 3231 -41 237 163 0 0 chr2 222450874 222450923 -28236931 + (TTA)n Simple_repeat Simple_repeat 2 50 0 25 51 0 0 chr2 222451081 222451120 -28236734 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 222451181 222451203 -28236651 + AT_rich Low_complexity Low_complexity 1 22 0 221 321 0 0 chr2 222452151 222452204 -28235650 + MIR SINE MIR 205 257 -5 296 289 49 42 chr2 222452330 222452472 -28235382 - MIR SINE MIR -56 206 64 486 234 63 93 chr2 222452710 222452915 -28234939 + MLT2B1 LTR ERVL 322 520 0 3285 194 62 13 chr2 222452917 222453592 -28234262 + MLT1-int LTR MaLR 4 711 -660 408 156 0 0 chr2 222453581 222453645 -28234209 + MLT1-int LTR MaLR 824 887 -484 * 267 170 0 19 chr2 222453713 222453766 -28234088 + MLT-int LTR MaLR 679 730 -1005 975 152 30 173 chr2 222454043 222454280 -28233574 + MLT1A2 LTR MaLR 173 374 0 412 248 34 8 chr2 222454280 222454397 -28233457 + MIR SINE MIR 73 192 -70 315 0 0 0 chr2 222454734 222454769 -28233085 + (CA)n Simple_repeat Simple_repeat 2 36 0 348 81 0 81 chr2 222455795 222455857 -28231997 - Alu SINE Alu 0 302 246 21 0 0 0 chr2 222457668 222457689 -28230165 + AT_rich Low_complexity Low_complexity 1 21 0 362 260 0 0 chr2 222458719 222458792 -28229062 - MER116 DNA Mariner -7 73 1 26 30 0 0 chr2 222459749 222459782 -28228072 + AT_rich Low_complexity Low_complexity 1 33 0 523 307 12 0 chr2 222460368 222460531 -28227323 + MER103 DNA DNA 1 165 -1 190 361 0 49 chr2 222460739 222460883 -28226971 - L2 LINE L2 -291 2981 2845 400 298 40 33 chr2 222460909 222461060 -28226794 - MIR SINE MIR -62 200 49 229 370 47 55 chr2 222461352 222461609 -28226245 - L2 LINE L2 -611 2703 2449 228 280 72 64 chr2 222461947 222462072 -28225782 + MIR3 SINE MIR 81 206 -2 552 292 112 29 chr2 222463282 222463559 -28224295 - LTR16C LTR ERVL -189 302 3 232 242 20 71 chr2 222464016 222464115 -28223739 + L1MC4a LINE L1 5843 5936 -1872 254 275 0 22 chr2 222464121 222464212 -28223642 + (TAGA)n Simple_repeat Simple_repeat 2 90 0 21 0 0 0 chr2 222464341 222464362 -28223492 + AT_rich Low_complexity Low_complexity 1 21 0 198 277 21 0 chr2 222466451 222466498 -28221356 + L2 LINE L2 3217 3264 -8 21 82 0 0 chr2 222466929 222466978 -28220876 + AT_rich Low_complexity Low_complexity 1 49 0 801 274 27 27 chr2 222467195 222467418 -28220436 - MIR SINE MIR -21 241 19 2121 117 3 3 chr2 222468388 222468688 -28219166 + AluSc SINE Alu 1 300 -9 180 0 0 0 chr2 222468825 222468845 -28219009 + (TCCA)n Simple_repeat Simple_repeat 3 22 0 311 194 54 43 chr2 222468853 222468946 -28218908 - L2 LINE L2 0 3272 3179 210 162 0 0 chr2 222469140 222469177 -28218677 + A-rich Low_complexity Low_complexity 1 37 0 997 204 5 10 chr2 222469523 222469724 -28218130 - MLT1G LTR MaLR -381 209 10 21 0 0 0 chr2 222469741 222469762 -28218092 + AT_rich Low_complexity Low_complexity 1 21 0 418 241 154 36 chr2 222469764 222469984 -28217870 + MLT1J LTR MaLR 266 511 0 390 21 0 0 chr2 222470499 222470546 -28217308 + (CA)n Simple_repeat Simple_repeat 2 48 0 399 41 0 0 chr2 222471656 222471705 -28216149 + (TG)n Simple_repeat Simple_repeat 1 49 0 1782 170 0 20 chr2 222473060 222473354 -28214500 + AluJo SINE Alu 1 288 -24 1727 134 52 4 chr2 222473794 222474083 -28213771 + AluSx SINE Alu 3 304 0 330 298 137 12 chr2 222474751 222474863 -28212991 - MIR SINE MIR -54 208 67 2073 128 0 10 chr2 222474863 222475159 -28212695 + AluSx SINE Alu 13 305 -7 330 298 137 12 chr2 222475159 222475214 -28212640 - MIR SINE MIR -195 67 20 4915 199 100 24 chr2 222475517 222476164 -28211690 + L1MB8 LINE L1 23 780 -6079 2054 101 0 0 chr2 222476164 222476431 -28211423 + AluY SINE Alu 6 272 -39 4915 199 100 24 chr2 222476431 222476824 -28211030 + L1MB8 LINE L1 780 1142 -5717 1515 244 11 20 chr2 222476830 222477277 -28210577 + L1MB8 LINE L1 2921 3363 -3594 1156 130 26 16 chr2 222477279 222477471 -28210383 - Tigger7 DNA MER2_type -3 2488 2295 * 3386 166 63 21 chr2 222477467 222477657 -28210197 - Tigger7 DNA MER2_type -88 645 464 2202 99 0 3 chr2 222477657 222477966 -28209888 - AluSg SINE Alu 0 308 1 3386 166 63 21 chr2 222477966 222478393 -28209461 - Tigger7 DNA MER2_type -269 464 1 544 248 14 0 chr2 222478394 222478539 -28209315 + L1MB8 LINE L1 3389 3535 -3422 1897 144 0 0 chr2 222478540 222478825 -28209029 + MER49 LTR ERV1 1 285 -638 1377 204 16 44 chr2 222478833 222478990 -28208864 + MER4D LTR ERV1 594 739 -164 2224 126 47 16 chr2 222478990 222479354 -28208500 + THE1C LTR MaLR 1 375 0 1377 204 16 44 chr2 222479354 222479515 -28208339 + MER4D LTR ERV1 739 903 0 3149 223 62 15 chr2 222479515 222480314 -28207540 + L1MB8 LINE L1 3533 4384 -2573 1312 128 221 12 chr2 222480314 222480563 -28207291 + AluSg1 SINE Alu 1 301 -8 3149 223 62 15 chr2 222480563 222480696 -28207158 + L1MB8 LINE L1 4384 4509 -2448 5495 194 39 26 chr2 222480696 222482726 -28205128 + L1MB8 LINE L1 4931 6984 -5 823 248 40 5 chr2 222482853 222483091 -28204763 + MIR SINE MIR 5 247 -15 2007 114 0 4 chr2 222483101 222483382 -28204472 + AluY SINE Alu 28 307 -4 436 242 24 24 chr2 222483955 222484079 -28203775 + MLT1K LTR MaLR 180 303 -285 450 388 0 7 chr2 222484434 222484586 -28203268 + L2 LINE L2 3122 3272 0 2395 65 34 0 chr2 222484725 222485018 -28202836 + AluY SINE Alu 1 303 -8 508 149 11 21 chr2 222535376 222535470 -28152384 - THE1C LTR MaLR -282 93 1 1147 237 7 22 chr2 222535807 222536081 -28151773 - AluJo SINE Alu -13 299 30 1181 66 0 7 chr2 222536296 222536448 -28151406 + AluY SINE Alu 140 290 -21 2411 86 0 3 chr2 222536457 222536758 -28151096 + AluSg SINE Alu 1 300 -10 757 157 8 8 chr2 222537088 222537222 -28150632 + AluSq/x SINE Alu 1 134 -179 1603 98 219 0 chr2 222537294 222537540 -28150314 + AluSg1 SINE Alu 1 300 -9 336 284 86 17 chr2 222538136 222538252 -28149602 - MER5A DNA MER1_type -50 139 16 270 259 114 114 chr2 222540105 222540325 -28147529 + MIR SINE MIR 43 262 0 * 438 288 32 0 chr2 222540318 222540443 -28147411 - MIR SINE MIR -108 154 26 1005 201 31 26 chr2 222541465 222541694 -28146160 + MIR SINE MIR 2 231 -31 1860 142 14 24 chr2 222541741 222541850 -28146004 + AluSx SINE Alu 5 114 -198 486 0 0 0 chr2 222541850 222541904 -28145950 + (CTA)n Simple_repeat Simple_repeat 1 54 0 1860 142 14 24 chr2 222541904 222542089 -28145765 + AluSx SINE Alu 114 296 -16 2288 104 0 3 chr2 222542092 222542391 -28145463 + AluSx SINE Alu 1 298 -14 2142 112 133 16 chr2 222543610 222543806 -28144048 + MSTA LTR MaLR 1 173 -255 306 50 0 0 chr2 222543806 222543846 -28144008 + (TC)n Simple_repeat Simple_repeat 1 40 0 2142 112 133 16 chr2 222543846 222544032 -28143822 + MSTA LTR MaLR 173 428 0 2365 128 15 23 chr2 222544668 222545058 -28142796 - L1MA9 LINE L1 -245 6067 5681 899 222 41 27 chr2 222545067 222545288 -28142566 + L1MA9 LINE L1 6067 6290 -22 228 297 36 69 chr2 222545484 222545760 -28142094 - HAL1 LINE L1 -1 2506 2240 234 91 0 0 chr2 222545775 222545808 -28142046 + (TC)n Simple_repeat Simple_repeat 1 33 0 256 284 69 29 chr2 222545882 222545984 -28141870 - MLT1L LTR MaLR -509 106 1 416 248 9 18 chr2 222546121 222546230 -28141624 + MER5B DNA MER1_type 9 116 -62 345 309 83 46 chr2 222546267 222546616 -28141238 + MLT1K LTR MaLR 203 564 -24 351 0 0 0 chr2 222547260 222547299 -28140555 + (CA)n Simple_repeat Simple_repeat 2 40 0 2272 103 3 0 chr2 222547516 222547817 -28140037 - AluSq SINE Alu -11 302 1 361 294 186 37 chr2 222548584 222549020 -28138834 + L3 LINE CR1 407 907 -670 285 240 0 0 chr2 222549074 222549149 -28138705 + MIR SINE MIR 178 252 -10 270 116 0 0 chr2 222549153 222549196 -28138658 + (CCTA)n Simple_repeat Simple_repeat 1 43 0 2058 145 0 3 chr2 222549341 222549644 -28138210 - AluJb SINE Alu 0 312 11 522 169 105 8 chr2 222549729 222549853 -28138001 - MIR SINE MIR -90 172 37 3833 29 0 0 chr2 222550637 222551081 -28136773 + L1PA4 LINE L1 5709 6152 -3 279 0 0 0 chr2 222551084 222551115 -28136739 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 190 170 298 21 chr2 222551688 222551782 -28136072 - MIR SINE MIR -19 243 124 313 307 8 39 chr2 222552605 222552732 -28135122 + L2 LINE L2 2976 3098 -174 2400 85 0 0 chr2 222552776 222553069 -28134785 - AluY SINE Alu -18 293 1 2456 84 3 0 chr2 222553368 222553678 -28134176 + AluY SINE Alu 1 311 0 2235 111 0 3 chr2 222554243 222554541 -28133313 - AluSx SINE Alu -15 297 1 1479 152 40 55 chr2 222555541 222555668 -28132186 + MER33 DNA MER1_type 1 128 -2457 1924 157 27 0 chr2 222555668 222555961 -28131893 + AluJb SINE Alu 1 301 -11 1479 152 40 55 chr2 222555961 222555992 -28131862 + MER33 DNA MER1_type 128 158 -2427 1632 133 108 25 chr2 222555992 222556278 -28131576 + AluJb SINE Alu 1 310 -2 1479 152 40 55 chr2 222556278 222556447 -28131407 + MER33 DNA MER1_type 158 324 0 1936 157 7 0 chr2 222557016 222557331 -28130523 + AluSx SINE Alu 1 312 0 400 276 105 33 chr2 222557338 222557642 -28130212 + L1ME4a LINE L1 5321 5646 -475 489 76 0 0 chr2 222557642 222557708 -28130146 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 345 193 157 57 chr2 222557717 222557857 -28129997 + L1ME4a LINE L1 5968 6121 0 2437 95 0 0 chr2 222559409 222559713 -28128141 - AluSg SINE Alu -5 305 2 611 216 18 0 chr2 222560542 222560653 -28127201 - MER58A DNA MER1_type 0 126 14 285 259 68 51 chr2 222560926 222561064 -28126790 - MIR3 SINE MIR -73 135 9 2019 147 0 10 chr2 222561575 222561868 -28125986 - AluJo SINE Alu -21 291 2 1694 221 145 10 chr2 222562198 222562605 -28125249 - LTR40b LTR ERVL 0 462 1 1848 175 18 50 chr2 222562839 222563240 -28124614 + MLT1B LTR MaLR 3 390 0 3548 62 0 19 chr2 222563663 222564133 -28123721 + L1PA8 LINE L1 5711 6171 -1 1777 144 98 0 chr2 222565173 222565450 -28122404 + AluSx SINE Alu 1 304 -8 635 166 83 21 chr2 222565456 222565601 -28122253 + L1MA10 LINE L1 6180 6333 -1 369 58 0 0 chr2 222567614 222567666 -28120188 + (CA)n Simple_repeat Simple_repeat 2 53 0 258 32 0 0 chr2 222567665 222567696 -28120158 + (TC)n Simple_repeat Simple_repeat 1 31 0 * 33 43 0 0 chr2 222567802 222567849 -28120005 + AT_rich Low_complexity Low_complexity 1 47 0 2121 97 0 69 chr2 222568616 222568935 -28118919 + AluSx SINE Alu 1 297 -15 184 371 0 0 chr2 222569400 222569462 -28118392 + MIR SINE MIR 197 258 -4 17510 68 0 1 chr2 222569463 222571732 -28116122 + L1P LINE L1 1759 4025 -2121 2419 70 3 0 chr2 222571994 222572327 -28115527 + AluSp SINE Alu 1 334 0 201 108 0 0 chr2 222572775 222572812 -28115042 + (A)n Simple_repeat Simple_repeat 1 37 0 981 129 0 96 chr2 222573461 222573639 -28114215 + AluSg/x SINE Alu 137 297 -15 564 168 0 0 chr2 222573639 222573764 -28114090 + GA-rich Low_complexity Low_complexity 1 125 0 3550 157 35 68 chr2 222573769 222574488 -28113366 + L1MB3 LINE L1 5488 6182 -1 221 345 18 27 chr2 222574626 222574736 -28113118 - MIR SINE MIR -152 110 2 2237 118 0 28 chr2 222574851 222575173 -28112681 + AluSp SINE Alu 1 313 0 2292 103 48 31 chr2 222576790 222577148 -28110706 - THE1B LTR MaLR 0 364 1 811 220 12 6 chr2 222577184 222577357 -28110497 + FRAM SINE Alu 1 173 -3 496 235 205 6 chr2 222577804 222577970 -28109884 + MIR SINE MIR 31 229 -33 600 203 51 159 chr2 222579018 222579313 -28108541 + MER102a DNA MER1_type 68 330 0 2208 128 61 0 chr2 222579356 222579699 -28108155 + THE1B LTR MaLR 1 364 0 474 285 57 24 chr2 222579780 222580026 -28107828 + L1MC4a LINE L1 5679 5932 -1876 2156 123 0 3 chr2 222580061 222580353 -28107501 - AluSg SINE Alu -18 292 2 2164 94 0 75 chr2 222580412 222580743 -28107111 + AluSq SINE Alu 5 310 -3 32778 105 10 58 chr2 222580911 222587377 -28100477 + L1PA7 LINE L1 11 6153 -1 362 173 13 0 chr2 222587382 222587457 -28100397 + GA-rich Low_complexity Low_complexity 6 81 0 231 36 0 0 chr2 222587686 222587714 -28100140 + (GA)n Simple_repeat Simple_repeat 1 28 0 2036 134 0 33 chr2 222589584 222589890 -28097964 - AluSx SINE Alu -16 296 1 341 300 151 26 chr2 222590285 222590635 -28097219 - L2 LINE L2 0 3313 2920 2347 104 0 0 chr2 222590832 222591157 -28096697 + AluSq SINE Alu 1 325 0 262 291 58 39 chr2 222591583 222591686 -28096168 - L2 LINE L2 -1 3312 3208 252 278 7 90 chr2 222593392 222593536 -28094318 + L2 LINE L2 3134 3265 -7 291 196 39 0 chr2 222593787 222593940 -28093914 + CT-rich Low_complexity Low_complexity 1 159 0 521 235 16 15 chr2 222595538 222595800 -28092054 + CT-rich Low_complexity Low_complexity 1 262 0 284 200 15 0 chr2 222595894 222595959 -28091895 - AluSp/q SINE Alu -3 300 235 1530 253 171 23 chr2 222596264 222597252 -28090602 + L2 LINE L2 2131 3269 -44 784 128 0 0 chr2 222597254 222597379 -28090475 + AluSg/x SINE Alu 186 310 0 310 128 0 0 chr2 222597385 222597432 -28090422 + L2 LINE L2 3264 3310 -3 655 304 75 12 chr2 222597553 222597872 -28089982 - L2 LINE L2 -111 3202 2864 618 250 157 27 chr2 222597908 222598240 -28089614 + L1ME3A LINE L1 5717 6091 -79 2117 122 6 10 chr2 222598247 222598558 -28089296 - AluSx SINE Alu -2 310 1 23 54 0 0 chr2 222598629 222598666 -28089188 + AT_rich Low_complexity Low_complexity 1 37 0 360 268 81 24 chr2 222599864 222599961 -28087893 + MIR SINE MIR 56 163 -99 2272 217 101 42 chr2 222599961 222600208 -28087646 - MER82 DNA MER2_type 0 653 422 2147 124 0 0 chr2 222600208 222600534 -28087320 - AluSx SINE Alu 0 326 1 2272 217 101 42 chr2 222600534 222600902 -28086952 - MER82 DNA MER2_type -231 422 1 360 268 81 24 chr2 222600902 222600927 -28086927 + MIR SINE MIR 163 185 -77 1560 201 153 14 chr2 222601797 222602151 -28085703 + MER82 DNA MER2_type 1 403 -250 285 132 0 0 chr2 222602170 222602208 -28085646 + Alu SINE Alu 1 38 -264 1649 73 5 5 chr2 222602432 222602637 -28085217 - AluSq SINE Alu -108 205 1 1297 215 71 75 chr2 222602752 222603150 -28084704 + MLT1C LTR MaLR 1 398 -69 2726 39 0 0 chr2 222603150 222603457 -28084397 - AluY SINE Alu -3 308 2 1297 215 71 75 chr2 222603457 222603524 -28084330 + MLT1C LTR MaLR 398 464 -3 411 120 66 7 chr2 222603600 222603615 -28084239 + L1MB7 LINE L1 6050 6063 -121 2337 70 7 3 chr2 222603615 222603913 -28083941 + AluY SINE Alu 1 299 -12 411 120 66 7 chr2 222603913 222603982 -28083872 + L1MB7 LINE L1 6063 6141 -43 848 230 43 9 chr2 222604197 222604427 -28083427 - MIR SINE MIR -2 260 23 23 0 0 0 chr2 222606717 222606740 -28081114 + AT_rich Low_complexity Low_complexity 1 23 0 1254 271 41 70 chr2 222606797 222607167 -28080687 - L1MC4a LINE L1 -1785 6023 5675 2428 67 0 3 chr2 222607167 222607465 -28080389 + AluSc SINE Alu 1 297 -12 1254 271 41 70 chr2 222607465 222607680 -28080174 - L1MC4a LINE L1 -2133 5675 5455 552 263 66 35 chr2 222607680 222607908 -28079946 - L2 LINE L2 -6 3307 3073 381 238 0 0 chr2 222607908 222608009 -28079845 + (TG)n Simple_repeat Simple_repeat 2 102 0 1167 277 71 33 chr2 222608011 222608715 -28079139 - L2 LINE L2 -223 3090 2358 339 297 31 23 chr2 222609299 222609427 -28078427 + MIR SINE MIR 64 192 -70 237 294 22 0 chr2 222610008 222610100 -28077754 - L1MC/D LINE L1 -1924 5884 5791 2283 86 0 40 chr2 222610669 222610971 -28076883 + AluSx SINE Alu 3 292 -20 377 187 55 30 chr2 222611104 222611254 -28076600 + L2 LINE L2 3190 3308 -5 2397 71 3 7 chr2 222612306 222612603 -28075251 - AluY SINE Alu -15 296 1 839 290 162 26 chr2 222612983 222613490 -28074364 - MLT1K LTR MaLR -2 586 11 239 343 21 29 chr2 222613794 222613934 -28073920 + MER5A DNA MER1_type 1 139 -50 1063 161 0 6 chr2 222613958 222614120 -28073734 - AluSx SINE Alu -24 288 128 493 77 0 0 chr2 222614121 222614186 -28073668 - AluSx SINE Alu -248 65 1 650 237 70 13 chr2 222614238 222614394 -28073460 - MER96 DNA MER1_type? -1 174 10 1927 133 0 43 chr2 222614754 222615056 -28072798 + AluSq SINE Alu 1 289 -24 2006 130 0 0 chr2 222616488 222616764 -28071090 - AluSx SINE Alu -36 276 1 1044 150 0 0 chr2 222617051 222617198 -28070656 + AluSq/x SINE Alu 1 147 -166 435 100 0 0 chr2 222617198 222617258 -28070596 + Alu SINE Alu 234 293 -18 2198 109 0 30 chr2 222617388 222617691 -28070163 + AluSx SINE Alu 1 294 -18 667 82 37 30 chr2 222617691 222617825 -28070029 + GA-rich Low_complexity Low_complexity 1 135 0 803 256 42 27 chr2 222618194 222618570 -28069284 - LTR16A LTR ERVL -3 447 26 1590 187 41 75 chr2 222618807 222619150 -28068704 + L1MB5 LINE L1 5783 6136 -38 243 0 0 0 chr2 222619150 222619177 -28068677 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1869 134 18 0 chr2 222619180 222619457 -28068397 - AluJb SINE Alu -30 282 1 1590 187 41 75 chr2 222619457 222619497 -28068357 + L1MB5 LINE L1 6138 6167 -7 2106 137 0 3 chr2 222620208 222620501 -28067353 + AluSx SINE Alu 3 294 -18 2470 54 0 41 chr2 222621030 222621345 -28066509 + AluY SINE Alu 1 302 -9 318 99 14 56 chr2 222621631 222621702 -28066152 + L1MB4 LINE L1 6113 6180 0 2291 88 3 0 chr2 222621994 222622279 -28065575 + AluSc SINE Alu 1 286 -23 647 235 54 0 chr2 222623105 222623271 -28064583 + MIR SINE MIR 28 202 -60 191 208 21 21 chr2 222623378 222623426 -28064428 + MIR SINE MIR 215 262 0 1878 119 3 68 chr2 222623444 222623738 -28064116 - AluSx SINE Alu -19 293 19 270 0 0 0 chr2 222623821 222623851 -28064003 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 351 0 0 0 chr2 222623850 222623889 -28063965 + (CA)n Simple_repeat Simple_repeat 1 39 0 2045 113 0 0 chr2 222624018 222624283 -28063571 + AluSq SINE Alu 1 265 -48 764 56 48 8 chr2 222624288 222624413 -28063441 + GA-rich Low_complexity Low_complexity 4 133 0 963 124 0 32 chr2 222624421 222624606 -28063248 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 297 238 127 48 chr2 222626043 222626169 -28061685 - L1MC5 LINE L1 -74 7887 7752 292 149 6 34 chr2 222626271 222626337 -28061517 - MIR SINE MIR -119 89 23 875 255 78 37 chr2 222627148 222627470 -28060384 + LTR16B LTR ERVL 3 337 -127 272 316 35 52 chr2 222627800 222627974 -28059880 + HERV16 LTR ERVL 4136 4306 -1348 518 196 74 34 chr2 222627984 222628132 -28059722 + LTR41 LTR ERVL 30 183 -590 1068 221 97 79 chr2 222628165 222628379 -28059475 + LTR41 LTR ERVL 347 573 -200 2119 126 7 3 chr2 222628379 222628680 -28059174 - AluSx SINE Alu -10 302 1 1068 221 97 79 chr2 222628680 222628858 -28058996 + LTR41 LTR ERVL 573 746 -27 359 324 50 38 chr2 222628868 222629106 -28058748 + HERV16 LTR ERVL 4045 4285 -711 708 240 46 10 chr2 222629528 222629724 -28058130 + LTR16B LTR ERVL 255 457 -7 334 327 50 0 chr2 222629905 222630006 -28057848 + L2 LINE L2 3141 3246 -26 532 208 85 23 chr2 222630480 222630610 -28057244 - MER96 DNA MER1_type? -37 138 1 2057 134 0 0 chr2 222630696 222631007 -28056847 + AluSx SINE Alu 1 311 0 2055 115 3 56 chr2 222631495 222631818 -28056036 - AluSx SINE Alu -6 306 1 339 274 85 13 chr2 222632407 222632560 -28055294 + MIR SINE MIR 58 221 -41 539 301 99 62 chr2 222632730 222633115 -28054739 + MLT1K LTR MaLR 149 547 -41 1772 158 34 10 chr2 222633145 222633443 -28054411 - AluJb SINE Alu -7 305 1 2327 105 0 7 chr2 222633476 222633781 -28054073 + AluSq SINE Alu 1 303 -10 411 283 63 19 chr2 222633786 222633945 -28053909 - MIR SINE MIR -66 196 31 4336 161 65 18 chr2 222634403 222635225 -28052629 + MER21B LTR ERV1 1 860 -3 194 367 22 0 chr2 222635469 222635559 -28052295 + MIR3 SINE MIR 91 182 -26 1158 138 0 0 chr2 222635653 222635813 -28052041 - AluY SINE Alu -19 292 133 242 311 0 0 chr2 222635822 222635912 -28051942 - L1MC4 LINE L1 -1339 6703 6614 * 253 253 0 22 chr2 222635867 222635958 -28051896 + L1MC4 LINE L1 6615 6703 -1339 255 170 0 0 chr2 222635958 222636005 -28051849 + (TA)n Simple_repeat Simple_repeat 2 48 0 2289 82 0 14 chr2 222636005 222636299 -28051555 - AluY SINE Alu -21 290 1 959 191 35 0 chr2 222637436 222637609 -28050245 + AluYa5 SINE Alu 126 304 -7 380 292 26 26 chr2 222637755 222637909 -28049945 + MER5A DNA MER1_type 1 154 -35 850 188 88 0 chr2 222637909 222638069 -28049785 + MER96 DNA MER1_type 1 174 -1 1404 157 29 103 chr2 222638163 222638513 -28049341 + MER33 DNA MER1_type 1 324 0 1539 102 5 5 chr2 222638786 222638992 -28048862 + AluSx SINE Alu 1 206 -106 515 133 86 13 chr2 222639015 222639166 -28048688 + Charlie1 DNA MER1_type 2524 2685 -76 273 57 0 0 chr2 222639167 222639202 -28048652 + (TA)n Simple_repeat Simple_repeat 1 35 0 2078 130 10 3 chr2 222639202 222639501 -28048353 - AluSx SINE Alu -11 301 1 2139 120 34 0 chr2 222639876 222640167 -28047687 + AluSp SINE Alu 1 301 -12 242 162 0 0 chr2 222640830 222640867 -28046987 - tRNA-Met-e tRNA tRNA -38 37 1 2474 80 0 3 chr2 222640953 222641265 -28046589 - AluY SINE Alu 0 311 1 189 0 0 0 chr2 222641275 222641296 -28046558 + (A)n Simple_repeat Simple_repeat 1 21 0 1906 134 17 21 chr2 222641318 222641608 -28046246 + AluSq SINE Alu 1 289 -24 213 94 0 0 chr2 222641609 222641641 -28046213 + (CAT)n Simple_repeat Simple_repeat 3 34 0 551 143 31 0 chr2 222641665 222641763 -28046091 + FRAM SINE Alu 73 173 -3 25 0 0 0 chr2 222642306 222642331 -28045523 + AT_rich Low_complexity Low_complexity 1 25 0 1943 145 0 23 chr2 222642832 222643136 -28044718 + AluJo SINE Alu 1 297 -15 2255 98 3 0 chr2 222643517 222643813 -28044041 + AluY SINE Alu 1 297 -14 1995 151 13 0 chr2 222643900 222644205 -28043649 + AluSx SINE Alu 1 309 -3 2178 121 3 0 chr2 222644801 222645091 -28042763 + AluSx SINE Alu 1 291 -21 1287 254 76 13 chr2 222645274 222645722 -28042132 - L1MEc LINE L1 -4674 1722 1247 2334 106 0 0 chr2 222645748 222646050 -28041804 - AluSx SINE Alu -10 302 1 1382 147 8 49 chr2 222646066 222646125 -28041729 - MER46A DNA MER2_type -2495 236 176 2369 59 0 7 chr2 222646125 222646440 -28041414 - AluY SINE Alu 0 313 1 1382 147 8 49 chr2 222646440 222646619 -28041235 - MER46A DNA MER2_type -2555 176 2 21 0 0 0 chr2 222646764 222646785 -28041069 + AT_rich Low_complexity Low_complexity 1 21 0 2483 89 0 6 chr2 222646899 222647212 -28040642 + AluSq SINE Alu 1 311 -2 234 91 0 0 chr2 222647254 222647287 -28040567 + (T)n Simple_repeat Simple_repeat 1 33 0 937 168 0 12 chr2 222647303 222647464 -28040390 - AluSg/x SINE Alu -83 227 69 22 0 0 0 chr2 222647701 222647723 -28040131 + AT_rich Low_complexity Low_complexity 1 22 0 36 0 0 0 chr2 222647786 222647822 -28040032 + AT_rich Low_complexity Low_complexity 1 36 0 677 199 0 82 chr2 222649002 222649148 -28038706 - AluYb8 SINE Alu -8 310 177 237 146 49 0 chr2 222650275 222650316 -28037538 - Alu SINE Alu -258 43 1 2271 97 0 3 chr2 222650511 222650810 -28037044 + AluSg SINE Alu 1 298 -12 2240 116 3 0 chr2 222650836 222651146 -28036708 + AluSp SINE Alu 1 311 -2 617 224 48 104 chr2 222651998 222652119 -28035735 - MER112 DNA MER1_type -3 253 154 2354 112 0 0 chr2 222652119 222652432 -28035422 + AluSq SINE Alu 1 313 0 617 224 48 104 chr2 222652432 222652578 -28035276 - MER112 DNA MER1_type -102 154 1 861 244 73 70 chr2 222652784 222653169 -28034685 + L1MC4 LINE L1 5555 5940 -1868 617 275 80 78 chr2 222653325 222653750 -28034104 + MLT1K LTR MaLR 21 446 -142 601 234 91 11 chr2 222653775 222653950 -28033904 - MER5A DNA MER1_type 0 189 1 245 265 0 0 chr2 222654290 222654358 -28033496 - MER53 DNA DNA 0 189 122 2500 208 173 12 chr2 222654776 222655448 -28032406 - L1MB7 LINE L1 -10 6174 5395 1621 202 75 8 chr2 222655444 222655830 -28032024 - L1MB7 LINE L1 -1343 4803 4392 * 1201 279 159 43 chr2 222655949 222656060 -28031794 + L1MC4 LINE L1 6684 6781 -1261 1645 189 0 16 chr2 222656060 222656366 -28031488 + AluJo SINE Alu 1 301 -11 1201 279 159 43 chr2 222656366 222656691 -28031163 + L1MC4 LINE L1 6781 7067 -975 1582 139 21 78 chr2 222656691 222657022 -28030832 + AluJo SINE Alu 1 312 0 1201 279 159 43 chr2 222657022 222657638 -28030216 + L1MC4 LINE L1 7067 7610 -432 189 74 0 0 chr2 222657638 222657665 -28030189 + (TG)n Simple_repeat Simple_repeat 1 27 0 1201 279 159 43 chr2 222657665 222657733 -28030121 + L1MC4 LINE L1 7610 7669 -373 2160 110 24 0 chr2 222657733 222658025 -28029829 - AluSx SINE Alu -12 300 2 1201 279 159 43 chr2 222658025 222658117 -28029737 + L1MC4 LINE L1 7669 8040 -2 314 305 20 40 chr2 222658308 222658414 -28029440 - HAL1b LINE L1 -8 1340 1236 1971 122 148 0 chr2 222658414 222658717 -28029137 + MER7A DNA MER2_type 1 346 0 314 305 20 40 chr2 222658717 222658761 -28029093 - HAL1b LINE L1 -112 1236 1193 268 373 23 9 chr2 222658779 222658996 -28028858 - L1MC4a LINE L1 -1874 5934 5715 2337 100 0 3 chr2 222659018 222659318 -28028536 + AluSc SINE Alu 1 299 -10 2082 101 19 44 chr2 222659388 222659705 -28028149 - AluSx SINE Alu -3 309 1 1712 260 67 7 chr2 222659869 222660330 -28027524 + MLT1J LTR MaLR 7 495 -16 370 289 94 0 chr2 222660722 222660871 -28026983 - L1MC4a LINE L1 -420 5701 5539 2116 133 3 0 chr2 222661523 222661823 -28026031 + AluSx SINE Alu 1 301 -11 311 248 86 19 chr2 222661866 222661971 -28025883 + LTR16A1 LTR ERVL 346 457 0 904 175 19 31 chr2 222662372 222662532 -28025322 - FRAM SINE Alu -8 158 1 2621 230 82 50 chr2 222662545 222663231 -28024623 + L1MEc LINE L1 2 665 -5731 1869 89 0 0 chr2 222663231 222663466 -28024388 - AluSc SINE Alu -5 304 70 2621 230 82 50 chr2 222663466 222663627 -28024227 + L1MEc LINE L1 665 881 -5515 2323 99 3 0 chr2 222663627 222663929 -28023925 + AluSg SINE Alu 1 303 -7 2621 230 82 50 chr2 222663929 222663972 -28023882 + L1MEc LINE L1 881 921 -5475 1168 237 60 16 chr2 222663955 222664322 -28023532 + L1MEc LINE L1 1414 1796 -4600 * 965 170 29 68 chr2 222664329 222664535 -28023319 - AluJb SINE Alu -21 291 94 546 182 64 102 chr2 222664536 222664723 -28023131 + L1MEc LINE L1 1789 1968 -4428 3863 195 67 18 chr2 222664724 222665336 -28022518 + Tigger6a DNA MER2_type 2 583 -1014 2242 110 7 3 chr2 222665336 222665637 -28022217 + AluSg SINE Alu 1 302 -8 3863 195 67 18 chr2 222665637 222665854 -28022000 + Tigger6a DNA MER2_type 583 877 -720 1549 130 65 22 chr2 222665854 222666131 -28021723 - L1MA7 LINE L1 0 6291 6003 3863 195 67 18 chr2 222666131 222666170 -28021684 + Tigger6a DNA MER2_type 877 913 -170 3929 71 2 18 chr2 222666171 222666679 -28021175 - LTR3b LTR ERVK 0 500 1 256 182 0 0 chr2 222666693 222666737 -28021117 - HERVK14 LTR ERVK -61 5884 5841 * 2448 148 31 63 chr2 222666736 222667434 -28020420 - HERVK14 LTR ERVK -378 5567 1988 728 177 23 8 chr2 222667562 222667692 -28020162 + Tigger6a DNA MER2_type 951 1082 -1 321 150 21 0 chr2 222667718 222667778 -28020076 - FAM SINE Alu -12 163 109 189 375 133 16 chr2 222667840 222667968 -28019886 + L2 LINE L2 3111 3253 -19 3868 109 58 5 chr2 222668075 222668644 -28019210 - L1PB4 LINE L1 -1 6155 5557 2254 137 11 117 chr2 222668940 222669614 -28018240 + Tigger3(Golem) DNA MER2_type 1 3029 0 1686 167 50 7 chr2 222669843 222670142 -28017712 + AluSx SINE Alu 1 312 0 639 121 0 0 chr2 222670142 222670241 -28017613 + (GGAA)n Simple_repeat Simple_repeat 3 101 0 394 216 52 45 chr2 222670553 222670680 -28017174 + L1ME4a LINE L1 5733 5860 -261 1410 200 51 0 chr2 222670680 222670975 -28016879 + AluJo SINE Alu 1 310 -2 394 216 52 45 chr2 222670975 222671080 -28016774 + L1ME4a LINE L1 5860 5963 -158 1041 153 0 12 chr2 222671869 222672032 -28015822 - AluSg/x SINE Alu -8 302 142 238 247 135 0 chr2 222672066 222672155 -28015699 + L1ME LINE L1 5676 5776 -345 2035 138 0 0 chr2 222672200 222672490 -28015364 + AluSx SINE Alu 3 292 -20 2386 90 0 3 chr2 222672499 222672800 -28015054 + AluSg SINE Alu 1 300 -10 815 158 8 8 chr2 222673131 222673264 -28014590 + AluSq/x SINE Alu 2 134 -179 1583 98 219 0 chr2 222673336 222673582 -28014272 + AluSg1 SINE Alu 1 300 -9 23 68 0 0 chr2 222674125 222674169 -28013685 + AT_rich Low_complexity Low_complexity 1 44 0 2108 115 21 0 chr2 222674345 222674633 -28013221 - AluSx SINE Alu -16 296 3 610 271 191 19 chr2 222674648 222675120 -28012734 - L1ME LINE L1 -303 5818 5266 650 186 8 40 chr2 222675129 222675253 -28012601 + FLAM_C SINE Alu 1 120 -13 36 0 0 0 chr2 222676121 222676157 -28011697 + GC_rich Low_complexity Low_complexity 1 36 0 199 300 100 25 chr2 222678523 222678603 -28009251 - L3b LINE CR1 0 1583 1498 359 286 127 56 chr2 222678778 222679229 -28008625 - L2 LINE L2 -101 3212 2726 1104 142 0 6 chr2 222679237 222679413 -28008441 - AluSg/x SINE Alu -1 311 137 257 103 0 0 chr2 222679449 222679488 -28008366 + Alu SINE Alu 6 44 -256 1165 120 77 11 chr2 222679488 222679671 -28008183 + AluSg/x SINE Alu 101 295 -17 337 307 46 20 chr2 222679677 222679830 -28008024 - L2 LINE L2 -614 2700 2544 2377 93 3 3 chr2 222679848 222680160 -28007694 + AluSp SINE Alu 1 312 -1 2221 109 7 0 chr2 222680329 222680622 -28007232 - AluSx SINE Alu -17 295 1 698 306 125 4 chr2 222681842 222682074 -28005780 + MIR SINE MIR 3 262 0 2060 136 3 0 chr2 222682141 222682435 -28005419 + AluSx SINE Alu 6 300 -12 2426 45 0 17 chr2 222682437 222682747 -28005107 + AluY SINE Alu 1 305 0 208 292 28 14 chr2 222682748 222682814 -28005040 + L2 LINE L2 3237 3304 -4 874 160 0 0 chr2 222682814 222682939 -28004915 + FLAM_A SINE Alu 1 125 -8 200 274 0 20 chr2 222683053 222683104 -28004750 + CT-rich Low_complexity Low_complexity 4 53 0 2186 112 13 16 chr2 222683700 222684013 -28003841 - AluSx SINE Alu 0 312 1 268 301 57 0 chr2 222684114 222684237 -28003617 + MIR SINE MIR 127 256 -6 210 171 0 0 chr2 222684269 222684310 -28003544 + (TG)n Simple_repeat Simple_repeat 2 42 0 945 197 236 0 chr2 222684593 222684826 -28003028 + MLT1F LTR MaLR 179 466 -76 488 215 8 16 chr2 222684959 222685080 -28002774 + MLT1F LTR MaLR 421 540 -2 1740 169 89 46 chr2 222685404 222685544 -28002310 + MLT1A1 LTR MaLR 1 134 -231 2272 101 27 0 chr2 222685544 222685840 -28002014 + AluSg SINE Alu 1 304 -6 1740 169 89 46 chr2 222685840 222686049 -28001805 + MLT1A1 LTR MaLR 134 365 0 23 33 0 0 chr2 222686604 222686634 -28001220 + AT_rich Low_complexity Low_complexity 1 30 0 505 141 56 0 chr2 222686636 222686707 -28001147 - AluS SINE Alu -233 76 2 321 197 0 0 chr2 222687286 222687362 -28000492 + (TA)n Simple_repeat Simple_repeat 2 77 0 306 0 0 0 chr2 222687386 222687420 -28000434 + (TG)n Simple_repeat Simple_repeat 2 35 0 1133 184 72 88 chr2 222688672 222689059 -27998795 + L1MC5 LINE L1 7124 7504 -457 2061 120 62 0 chr2 222689352 222689644 -27998210 - AluSx SINE Alu -2 310 1 2109 128 0 0 chr2 222690622 222690912 -27996942 - AluSx SINE Alu -13 299 10 1609 137 0 119 chr2 222691510 222691838 -27996016 + AluSx SINE Alu 1 289 -23 1135 315 64 30 chr2 222691925 222692764 -27995090 - L2 LINE L2 -73 3240 2371 240 326 121 45 chr2 222692782 222692914 -27994940 + MER115 DNA AcHobo 18 159 -534 480 92 46 23 chr2 222692958 222693089 -27994765 + (TG)n Simple_repeat Simple_repeat 1 134 0 206 167 52 21 chr2 222693125 222693221 -27994633 + (TG)n Simple_repeat Simple_repeat 1 99 0 442 127 65 24 chr2 222693282 222693581 -27994273 + (TG)n Simple_repeat Simple_repeat 1 311 0 194 191 24 24 chr2 222693602 222693686 -27994168 + (TG)n Simple_repeat Simple_repeat 1 84 0 1361 258 70 40 chr2 222695249 222695722 -27992132 - MLT1J LTR MaLR 0 511 25 1978 90 4 19 chr2 222695722 222696019 -27991835 - AluSx SINE Alu 0 313 21 348 83 0 0 chr2 222696108 222696156 -27991698 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 22 35 0 0 chr2 222696880 222696909 -27990945 + AT_rich Low_complexity Low_complexity 1 29 0 191 439 0 0 chr2 222697381 222697438 -27990416 - L2 LINE L2 -87 3185 3129 2069 100 54 4 chr2 222697971 222698250 -27989604 - AluSq SINE Alu -20 293 1 26 30 0 0 chr2 222698442 222698475 -27989379 + AT_rich Low_complexity Low_complexity 1 33 0 312 138 103 17 chr2 222698543 222698601 -27989253 - MLT1G1 LTR MaLR 0 595 533 895 180 0 0 chr2 222698602 222698752 -27989102 + AluJb SINE Alu 148 297 -15 303 271 166 28 chr2 222698776 222698957 -27988897 - MLT1A2 LTR MaLR -62 533 328 940 194 48 141 chr2 222699000 222699398 -27988456 - MLT1A2 LTR MaLR -13 361 1 338 267 110 48 chr2 222699398 222699646 -27988208 - MLT1E LTR MaLR -275 280 20 334 221 0 26 chr2 222700157 222700270 -27987584 + GA-rich Low_complexity Low_complexity 1 110 0 2007 96 10 43 chr2 222700383 222700684 -27987170 + AluSx SINE Alu 1 291 -21 2322 90 10 0 chr2 222701204 222701505 -27986349 + AluSp SINE Alu 1 304 -9 1663 142 10 35 chr2 222701592 222701880 -27985974 + AluJo SINE Alu 1 281 -31 298 266 0 47 chr2 222703106 222703234 -27984620 + A-rich Low_complexity Low_complexity 1 122 0 208 270 0 52 chr2 222703922 222704037 -27983817 + CT-rich Low_complexity Low_complexity 3 111 0 602 264 164 5 chr2 222704199 222704400 -27983454 - MIR SINE MIR -2 260 28 635 291 140 58 chr2 222705235 222705474 -27982380 - L3 LINE CR1 -63 1514 1296 1843 163 7 7 chr2 222705474 222705775 -27982079 + AluJo SINE Alu 1 301 -11 635 291 140 58 chr2 222705775 222705986 -27981868 - L3 LINE CR1 -281 1296 1027 497 265 62 25 chr2 222705989 222706151 -27981703 - MIR3 SINE MIR -7 201 34 215 296 46 65 chr2 222706311 222706419 -27981435 - L3 LINE CR1 -680 897 792 445 282 0 40 chr2 222707601 222707725 -27980129 + MIR SINE MIR 2 120 -142 1024 229 59 98 chr2 222707728 222708288 -27979566 - MLT1F1 LTR MaLR -4 563 1 566 211 32 0 chr2 222708288 222708411 -27979443 + MIR SINE MIR 115 241 -21 337 269 130 0 chr2 222708711 222708819 -27979035 + MER50 LTR ERV1 1 122 -612 1134 245 121 68 chr2 222708820 222709448 -27978406 + MER50 LTR ERV1 26 686 -48 467 277 117 24 chr2 222710244 222710493 -27977361 - L1ME3 LINE L1 -279 5883 5612 1523 187 16 32 chr2 222712396 222712706 -27975148 - AluJo SINE Alu -7 305 1 210 361 0 0 chr2 222713531 222713603 -27974251 - L2 LINE L2 -8 3264 3193 209 333 0 0 chr2 222714084 222714144 -27973710 - L3b LINE CR1 -226 1357 1298 30 0 0 0 chr2 222714796 222714826 -27973028 + AT_rich Low_complexity Low_complexity 1 30 0 650 252 8 0 chr2 222714837 222714956 -27972898 - AluJo/FRAM SINE Alu -64 248 129 2255 113 0 0 chr2 222714958 222715268 -27972586 - AluSx SINE Alu -1 311 2 1027 182 43 142 chr2 222715585 222715931 -27971923 - MLT1A1 LTR MaLR -49 316 5 349 275 68 68 chr2 222715956 222716163 -27971691 + MLT1K LTR MaLR 378 584 -4 245 363 0 0 chr2 222716176 222716267 -27971587 - MIR SINE MIR -120 142 52 2230 128 0 0 chr2 222717757 222718055 -27969799 + AluSx SINE Alu 1 298 -14 842 177 144 11 chr2 222718214 222718395 -27969459 - MER3 DNA MER1_type -4 205 1 1165 122 0 0 chr2 222718490 222718646 -27969208 - AluSg/x SINE Alu -22 290 135 2352 103 6 0 chr2 222719418 222719729 -27968125 - AluSp SINE Alu 0 313 1 1869 159 40 0 chr2 222721203 222721499 -27966355 + AluSx SINE Alu 1 308 -4 236 380 42 0 chr2 222722780 222722851 -27965003 + MIR SINE MIR 21 94 -168 510 310 35 17 chr2 222723005 222723179 -27964675 - MIR SINE MIR -62 200 24 210 289 74 68 chr2 222723199 222723389 -27964465 - L2 LINE L2 -494 2820 2630 2190 109 0 10 chr2 222723915 222724209 -27963645 - AluY SINE Alu -20 291 1 21 57 0 0 chr2 222724557 222724592 -27963262 + AT_rich Low_complexity Low_complexity 1 35 0 208 191 0 0 chr2 222725370 222725412 -27962442 - MIR SINE MIR -121 141 100 769 336 87 35 chr2 222725969 222726404 -27961450 + L2 LINE L2 2804 3261 -11 759 194 8 0 chr2 222727570 222727699 -27960155 - FLAM_A SINE Alu -3 139 10 427 300 113 70 chr2 222728006 222728406 -27959448 + L3 LINE CR1 1101 1517 -60 2183 102 0 28 chr2 222728647 222728969 -27958885 - AluSq SINE Alu 0 313 1 327 261 119 46 chr2 222729045 222729263 -27958591 + L2 LINE L2 3079 3312 -1 1918 124 0 4 chr2 222729774 222730040 -27957814 + AluSx SINE Alu 30 294 -18 2537 80 3 0 chr2 222730304 222730616 -27957238 + AluSp SINE Alu 1 313 0 191 343 145 16 chr2 222730730 222731103 -27956751 - L2 LINE L2 -1257 2057 1637 390 259 245 0 chr2 222731514 222731657 -27956197 - MER5A DNA MER1_type 0 189 12 21 57 0 0 chr2 222731679 222731714 -27956140 + AT_rich Low_complexity Low_complexity 1 35 0 608 119 12 0 chr2 222733390 222733474 -27954380 - AluJo SINE Alu -19 293 209 2624 60 17 37 chr2 222733477 222733830 -27954024 - THE1A LTR MaLR 0 355 10 1166 213 0 5 chr2 222733834 222734041 -27953813 - AluJo SINE Alu -106 206 1 183 366 104 0 chr2 222735182 222735316 -27952538 - MIR3 SINE MIR -3 205 58 183 80 0 0 chr2 222735765 222735790 -27952064 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 971 182 40 20 chr2 222735830 222735991 -27951863 - AluJo SINE Alu -48 264 97 2016 148 0 3 chr2 222735991 222736294 -27951560 + AluSx SINE Alu 1 302 -10 971 182 40 20 chr2 222736294 222736330 -27951524 - AluJo SINE Alu -215 97 63 231 246 0 77 chr2 222736331 222736396 -27951458 - AluYb8 SINE Alu -130 178 119 21 71 0 0 chr2 222736584 222736626 -27951228 + AT_rich Low_complexity Low_complexity 1 42 0 1448 169 109 35 chr2 222737128 222737466 -27950388 - MER47A DNA MER2_type -3 363 1 2394 67 3 26 chr2 222737922 222738234 -27949620 - AluY SINE Alu -6 305 1 195 331 105 35 chr2 222738300 222738472 -27949382 - L2 LINE L2 -197 3116 2933 389 334 118 44 chr2 222738668 222739366 -27948488 - L2 LINE L2 -726 2588 1840 707 301 76 71 chr2 222741087 222741612 -27946242 - L2 LINE L2 -1 3312 2784 290 274 29 0 chr2 222741653 222741755 -27946099 - L2 LINE L2 -667 2647 2543 1363 188 29 0 chr2 222744618 222744858 -27942996 - Tigger3(Golem) DNA MER2_type -4 3025 2779 1737 117 7 33 chr2 222744864 222745137 -27942717 + AluSx SINE Alu 41 306 -6 870 197 0 0 chr2 222745138 222745280 -27942574 - Tigger3(Golem) DNA MER2_type -2887 142 1 657 248 47 81 chr2 222745708 222745942 -27941912 + MIR SINE MIR 12 237 -25 1883 156 42 50 chr2 222746032 222746377 -27941477 - THE1C LTR MaLR 0 375 32 1986 134 10 16 chr2 222746377 222746683 -27941171 + AluSx SINE Alu 1 304 -8 1883 156 42 50 chr2 222746683 222746715 -27941139 - THE1C LTR MaLR -343 32 1 910 128 97 88 chr2 222746860 222747086 -27940768 - AluJo SINE Alu 0 312 85 319 326 133 48 chr2 222747121 222747581 -27940273 + L2 LINE L2 1599 2097 -1217 663 347 9 4 chr2 222747764 222747989 -27939865 - MIR SINE MIR -30 232 7 187 368 53 0 chr2 222748317 222748412 -27939442 + MIR SINE MIR 7 106 -156 520 300 45 6 chr2 222748454 222748653 -27939201 + MIR SINE MIR 39 244 -18 368 332 99 30 chr2 222748681 222748883 -27938971 + L2 LINE L2 2566 2781 -533 1451 118 4 53 chr2 222749252 222749480 -27938374 + AluJo SINE Alu 87 303 -9 357 287 92 38 chr2 222749489 222749782 -27938072 + L1MC/D LINE L1 5254 5562 -741 2442 84 0 0 chr2 222751442 222751753 -27936101 - AluY SINE Alu 0 311 1 223 313 0 16 chr2 222751888 222751952 -27935902 + L2 LINE L2 3210 3272 0 322 270 0 0 chr2 222752591 222752654 -27935200 - MIR SINE MIR -115 93 31 24 0 0 0 chr2 222753094 222753118 -27934736 + AT_rich Low_complexity Low_complexity 1 24 0 590 158 103 0 chr2 222753208 222753354 -27934500 + L1MA8 LINE L1 6112 6272 -19 288 200 0 0 chr2 222754144 222754209 -27933645 + T-rich Low_complexity Low_complexity 1 65 0 37 0 0 0 chr2 222754886 222754923 -27932931 + AT_rich Low_complexity Low_complexity 1 37 0 1363 193 104 7 chr2 222754947 222755216 -27932638 - AluJo SINE Alu -17 295 1 2231 100 33 0 chr2 222756612 222756913 -27930941 - AluSp SINE Alu -2 311 1 881 217 0 0 chr2 222757361 222757522 -27930332 - FRAM SINE Alu -18 158 1 1648 127 109 11 chr2 222757529 222757796 -27930058 - AluSx SINE Alu -8 304 12 244 289 13 0 chr2 222759275 222759351 -27928503 - MIR SINE MIR -105 157 81 1897 176 0 3 chr2 222760351 222760657 -27927197 - AluJb SINE Alu -7 305 1 24 0 0 0 chr2 222760928 222760952 -27926902 + AT_rich Low_complexity Low_complexity 1 24 0 465 34 0 0 chr2 222761789 222761848 -27926006 + (TG)n Simple_repeat Simple_repeat 1 59 0 514 60 0 48 chr2 222762923 222763007 -27924847 - MER49 LTR ERV1 0 923 844 222 284 34 34 chr2 222763039 222763127 -27924727 - MIR SINE MIR -94 168 81 4192 136 67 26 chr2 222763314 222763997 -27923857 - MER49 LTR ERV1 -89 834 112 2156 90 36 20 chr2 222763997 222764298 -27923556 + AluSc SINE Alu 1 306 -3 4192 136 67 26 chr2 222764298 222764415 -27923439 - MER49 LTR ERV1 -811 112 1 401 203 229 18 chr2 222764718 222764882 -27922972 - THE1C LTR MaLR -208 167 1 313 226 102 7 chr2 222766083 222766220 -27921634 - L1MB7 LINE L1 0 6184 6035 360 235 92 57 chr2 222766269 222766593 -27921261 - LTR38 LTR ERV1 -193 363 49 3573 202 112 19 chr2 222766608 222766690 -27921164 - L1M4 LINE L1 -1432 4714 4641 2006 142 13 7 chr2 222766690 222766999 -27920855 - AluSx SINE Alu -1 311 1 3573 202 112 19 chr2 222766999 222767835 -27920019 - L1M4 LINE L1 -1505 4641 3671 1680 170 117 14 chr2 222767835 222768193 -27919661 + MSTD LTR MaLR 2 396 0 3573 202 112 19 chr2 222768193 222768387 -27919467 - L1M4 LINE L1 -2475 3671 3497 255 369 0 6 chr2 222769430 222769587 -27918267 + (CCA)n Simple_repeat Simple_repeat 1 156 0 2015 245 91 10 chr2 222770324 222770352 -27917502 - L1M4 LINE L1 -2636 3510 3486 2247 110 0 0 chr2 222770352 222770651 -27917203 - AluSx SINE Alu -13 299 1 2015 245 91 10 chr2 222770651 222771491 -27916363 - L1M4 LINE L1 -2660 3486 2572 1349 247 172 30 chr2 222773204 222773251 -27914603 - L2 LINE L2 -129 3184 3145 1557 200 93 32 chr2 222773251 222773691 -27914163 - MLT1C LTR MaLR 0 467 1 1349 247 172 30 chr2 222773691 222774361 -27913493 - L2 LINE L2 -168 3145 2356 584 211 28 0 chr2 222774410 222774552 -27913302 - L2 LINE L2 -1712 1602 1457 2079 134 0 3 chr2 222774575 222774866 -27912988 + AluSx SINE Alu 1 290 -22 2263 103 3 3 chr2 222775044 222775344 -27912510 - AluSp SINE Alu -13 300 1 21 0 0 0 chr2 222777110 222777131 -27910723 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 222777739 222777763 -27910091 + AT_rich Low_complexity Low_complexity 1 24 0 360 0 0 0 chr2 222778264 222778304 -27909550 + (TG)n Simple_repeat Simple_repeat 1 40 0 2027 117 7 21 chr2 222778719 222779010 -27908844 - AluSx SINE Alu -25 287 1 471 238 65 12 chr2 222779370 222779538 -27908316 + LTR33A LTR ERVL 347 523 0 823 126 0 0 chr2 222779893 222780012 -27907842 - AluSx SINE Alu 0 312 194 1106 99 0 0 chr2 222780013 222780154 -27907700 - AluSx SINE Alu -172 141 1 495 0 0 0 chr2 222781696 222781751 -27906103 + (TG)n Simple_repeat Simple_repeat 2 56 0 324 0 0 0 chr2 222781992 222782028 -27905826 + (CA)n Simple_repeat Simple_repeat 2 37 0 525 80 0 0 chr2 222782028 222782103 -27905751 + (TC)n Simple_repeat Simple_repeat 2 76 0 332 353 15 7 chr2 222782534 222782670 -27905184 + L2 LINE L2 3160 3296 -17 474 232 67 87 chr2 222785530 222785608 -27902246 + L1MC5 LINE L1 7478 7556 -405 2434 77 3 0 chr2 222785608 222785918 -27901936 - AluSq SINE Alu -2 311 1 474 232 67 87 chr2 222785918 222786198 -27901656 + L1MC5 LINE L1 7556 7828 -133 2208 116 16 0 chr2 222786198 222786501 -27901353 - AluSq SINE Alu -5 308 1 474 232 67 87 chr2 222786501 222786603 -27901251 + L1MC5 LINE L1 7828 7930 -31 25 95 0 0 chr2 222786960 222787034 -27900820 + AT_rich Low_complexity Low_complexity 1 74 0 298 303 87 98 chr2 222788314 222788357 -27899497 - L2 LINE L2 -2 3270 3228 919 154 122 5 chr2 222788357 222788545 -27899309 - MER6B DNA MER2_type 0 210 1 298 303 87 98 chr2 222788545 222788765 -27899089 - L2 LINE L2 -44 3228 3010 924 105 0 23 chr2 222788896 222789029 -27898825 + FLAM_C SINE Alu 1 130 -3 215 182 68 0 chr2 222789498 222789542 -27898312 + MER5B DNA MER1_type 1 47 -131 559 111 10 10 chr2 222789544 222789643 -27898211 + (TTTTC)n Simple_repeat Simple_repeat 2 100 0 320 192 77 87 chr2 222789672 222789776 -27898078 - MER5B DNA MER1_type -74 104 2 282 211 232 32 chr2 222790075 222790170 -27897684 - L2 LINE L2 -18 3254 3141 269 100 0 0 chr2 222790663 222790703 -27897151 - MLT2C1 LTR ERVL -4 393 354 1689 174 61 26 chr2 222790751 222791096 -27896758 - MLT2C1 LTR ERVL -40 357 1 936 88 0 0 chr2 222791551 222791676 -27896178 + AluSp/q SINE Alu 182 306 -7 201 170 0 75 chr2 222791892 222791945 -27895909 - L2 LINE L2 -8 3264 3216 276 105 0 0 chr2 222792594 222792632 -27895222 + tRNA-Asp-GAC tRNA tRNA 1 38 -37 1934 120 11 14 chr2 222792741 222793064 -27894790 - AluSx SINE Alu 0 322 1 216 0 0 0 chr2 222794018 222794042 -27893812 + (T)n Simple_repeat Simple_repeat 1 24 0 234 268 85 49 chr2 222794262 222794344 -27893510 - MIR SINE MIR -89 119 35 1068 205 12 16 chr2 222794730 222794984 -27892870 - L1ME3 LINE L1 -1 6161 5909 689 168 96 6 chr2 222795006 222795173 -27892681 - L1ME3 LINE L1 -347 5815 5634 230 303 33 57 chr2 222795206 222795328 -27892526 - MIR SINE MIR -56 206 88 2039 142 0 0 chr2 222802130 222802425 -27885429 - AluSx SINE Alu -17 295 1 382 210 49 0 chr2 222802667 222802748 -27885106 - MER94 DNA DNA -49 85 1 2180 96 3 3 chr2 222803054 222803346 -27884508 + AluSx SINE Alu 5 296 -16 5003 148 52 22 chr2 222805978 222806865 -27880989 - MER49 LTR ERV1 -10 913 1 1344 220 22 4 chr2 222806865 222807160 -27880694 - MER49-int LTR ERV1 0 7097 6443 913 196 36 31 chr2 222807162 222807356 -27880498 - MER49-int LTR ERV1 -625 6133 5939 682 150 105 26 chr2 222807358 222807624 -27880230 - MER49-int LTR ERV1 -1367 4964 4586 * 1443 147 41 20 chr2 222807612 222807904 -27879950 - MER49-int LTR ERV1 -2577 4021 3724 2319 154 93 34 chr2 222807979 222808897 -27878957 - MER49-int LTR ERV1 -2868 3730 1558 369 157 0 0 chr2 222808898 222808949 -27878905 + Alu SINE Alu 1 51 -257 1382 184 73 4 chr2 222808955 222809235 -27878619 - LOR1-int LTR ERV1 0 7097 6446 6134 131 46 43 chr2 222809262 222810361 -27877493 - LTR57-int LTR ERVL -3958 1385 283 5764 111 37 22 chr2 222810888 222811789 -27876065 - MER49 LTR ERV1 -9 914 1 551 241 121 14 chr2 222812235 222812442 -27875412 + MIR SINE MIR 21 249 -13 780 176 67 0 chr2 222813284 222813449 -27874405 - MLT1C LTR MaLR -291 176 1 2258 135 22 155 chr2 222813938 222814472 -27873382 + LTR32 LTR ERVL 9 471 0 454 300 63 69 chr2 222814667 222815017 -27872837 - L2 LINE L2 -10 3262 2915 451 256 70 26 chr2 222815804 222815960 -27871894 + MER5B DNA MER1_type 12 174 -4 1675 160 4 14 chr2 222816687 222816968 -27870886 + AluJo SINE Alu 11 288 -24 1570 159 120 17 chr2 222817573 222818001 -27869853 + MLT2B2 LTR ERVL 1 515 0 337 206 0 0 chr2 222818249 222818322 -27869532 - L1 LINE L1 -1465 4681 4609 1684 166 0 30 chr2 222818323 222818618 -27869236 + AluJb SINE Alu 22 307 -5 2258 104 0 7 chr2 222819122 222819421 -27868433 - AluSg1 SINE Alu -12 297 1 675 92 50 25 chr2 222819514 222819634 -27868220 - L1MA4A LINE L1 -6 6297 6175 284 70 93 0 chr2 222819635 222819678 -27868176 - L1 LINE L1 -940 5908 5862 585 0 0 0 chr2 222819678 222819743 -27868111 + (TTTC)n Simple_repeat Simple_repeat 4 68 0 16123 166 42 30 chr2 222819806 222820605 -27867249 - L1 LINE L1 -1098 5750 4962 258 56 0 0 chr2 222820605 222820641 -27867213 + (TG)n Simple_repeat Simple_repeat 1 36 0 16123 166 42 30 chr2 222820641 222822762 -27865092 - L1 LINE L1 -1886 4962 2867 1934 152 0 23 chr2 222822762 222823108 -27864746 - AluSx SINE Alu 0 312 1 16123 166 42 30 chr2 222823108 222823732 -27864122 - L1 LINE L1 -3981 2867 2252 2485 72 0 3 chr2 222823732 222824036 -27863818 - AluSg SINE Alu -7 303 1 16123 166 42 30 chr2 222824036 222826170 -27861684 - L1 LINE L1 -4596 2252 3 388 301 85 0 chr2 222826573 222826726 -27861128 - MIR3 SINE MIR -21 187 22 204 233 33 0 chr2 222827352 222827412 -27860442 - MIR SINE MIR 0 262 201 1077 152 104 70 chr2 222827412 222827642 -27860212 + MER8 DNA MER2_type 1 238 -1 433 285 58 29 chr2 222827648 222827785 -27860069 - MIR SINE MIR -109 153 13 2122 116 14 0 chr2 222828274 222828568 -27859286 - AluSx SINE Alu -14 298 1 462 250 16 73 chr2 222828611 222828737 -27859117 - Charlie8 DNA MER1_type -2152 265 152 1808 159 7 27 chr2 222828737 222829032 -27858822 + AluJb SINE Alu 1 289 -23 462 250 16 73 chr2 222829032 222829097 -27858757 - Charlie8 DNA MER1_type -2265 152 85 315 0 0 0 chr2 222829325 222829360 -27858494 + (TG)n Simple_repeat Simple_repeat 2 36 0 1993 120 33 4 chr2 222829360 222829635 -27858219 - AluSg SINE Alu -27 283 1 483 322 61 9 chr2 222829942 222830156 -27857698 + MIR SINE MIR 34 258 -4 1385 161 47 24 chr2 222830288 222830583 -27857271 + MER33 DNA MER1_type 1 286 -38 959 180 0 3 chr2 222830583 222830827 -27857027 + AluJb SINE Alu 1 311 -1 342 130 0 0 chr2 222830849 222830903 -27856951 + MER33 DNA MER1_type 270 323 -1 261 277 0 0 chr2 222830906 222830971 -27856883 + L2 LINE L2 3249 3313 0 1001 95 18 36 chr2 222830972 222831079 -27856775 + L1MA5A LINE L1 6129 6233 -64 2286 116 73 14 chr2 222831079 222831423 -27856431 - THE1B LTR MaLR 0 364 1 1001 95 18 36 chr2 222831423 222831483 -27856371 + L1MA5A LINE L1 6233 6293 -4 228 305 38 8 chr2 222831651 222831782 -27856072 - MIR SINE MIR -116 146 12 261 0 0 0 chr2 222832216 222832245 -27855609 + (CA)n Simple_repeat Simple_repeat 2 30 0 25 0 0 0 chr2 222832800 222832825 -27855029 + AT_rich Low_complexity Low_complexity 1 25 0 2557 64 0 0 chr2 222833057 222833354 -27854500 + AluY SINE Alu 3 299 -12 189 213 0 0 chr2 222834257 222834304 -27853550 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 1396 275 76 21 chr2 222834735 222835131 -27852723 + LTR16B LTR ERVL 1 425 -39 1846 182 55 11 chr2 222835131 222835510 -27852344 - MSTD LTR MaLR 0 396 1 1396 275 76 21 chr2 222835510 222835549 -27852305 + LTR16B LTR ERVL 425 460 -4 420 353 13 7 chr2 222835677 222835830 -27852024 + L2 LINE L2 3119 3272 0 229 293 45 38 chr2 222836076 222836209 -27851645 - L2 LINE L2 -213 3059 2926 1999 114 4 0 chr2 222836329 222836614 -27851240 - AluSx SINE Alu 0 307 22 2208 109 0 0 chr2 222837537 222837822 -27850032 - AluSx SINE Alu -27 285 1 243 226 0 0 chr2 222837826 222837879 -27849975 - L1ME LINE L1 -297 5824 5772 394 290 82 43 chr2 222838131 222838483 -27849371 - L1ME4a LINE L1 -239 5882 5517 2066 114 0 62 chr2 222838690 222839015 -27848839 - AluSq SINE Alu -8 305 1 371 333 66 14 chr2 222839086 222839299 -27848555 + MLT1L LTR MaLR 374 597 -18 4623 81 23 5 chr2 222839377 222840034 -27847820 - L1MA3 LINE L1 -10 6295 5627 5130 137 6 10 chr2 222840034 222840589 -27847265 + L1M1 LINE L1 4485 5041 -1264 1939 152 55 22 chr2 222840589 222840952 -27846902 - THE1C LTR MaLR 0 375 1 5130 137 6 10 chr2 222840952 222841584 -27846270 + L1M1 LINE L1 5041 5666 -639 257 259 116 9 chr2 222841676 222841788 -27846066 - MIR SINE MIR -55 207 84 1990 126 0 0 chr2 222842249 222842518 -27845336 + AluSx SINE Alu 7 275 -37 222 37 0 0 chr2 222842523 222842550 -27845304 + (GAAA)n Simple_repeat Simple_repeat 1 27 0 700 294 94 53 chr2 222842724 222843042 -27844812 - MLT1K LTR MaLR -17 571 227 2099 93 27 27 chr2 222843042 222843342 -27844512 - AluY SINE Alu -11 300 1 700 294 94 53 chr2 222843342 222843479 -27844375 - MLT1K LTR MaLR -361 227 97 533 304 12 0 chr2 222844838 222845009 -27842845 + MIR SINE MIR 2 174 -88 32 0 0 0 chr2 222845031 222845063 -27842791 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr2 222846270 222846297 -27841557 + AT_rich Low_complexity Low_complexity 1 27 0 2359 88 0 0 chr2 222846657 222846964 -27840890 + AluSq SINE Alu 1 307 0 689 246 34 0 chr2 222846991 222847170 -27840684 + MIR SINE MIR 77 261 -1 572 248 38 0 chr2 222847580 222847713 -27840141 - L2 LINE L2 -2 3311 3174 2244 125 3 0 chr2 222847889 222848193 -27839661 - AluSx SINE Alu -7 305 1 811 157 8 0 chr2 222848193 222848314 -27839540 - FLAM_A SINE Alu -13 129 8 360 0 0 0 chr2 222849822 222849862 -27837992 + (TG)n Simple_repeat Simple_repeat 2 41 0 1674 277 316 27 chr2 222851554 222852424 -27835430 - L2 LINE L2 -12 3301 2683 1878 171 88 44 chr2 222852424 222852903 -27834951 - MLT1D LTR MaLR -3 502 3 1674 277 316 27 chr2 222852903 222854014 -27833840 - L2 LINE L2 -630 2683 742 643 216 99 18 chr2 222854033 222854255 -27833599 - MER20B DNA MER1_type 0 783 544 509 320 145 25 chr2 222854343 222854466 -27833388 - L2 LINE L2 -2641 673 566 1876 134 0 4 chr2 222854466 222854743 -27833111 + AluSx SINE Alu 6 281 -31 980 138 6 0 chr2 222854743 222854910 -27832944 + (GA)n Simple_repeat Simple_repeat 1 168 0 509 320 145 25 chr2 222854910 222855275 -27832579 - L2 LINE L2 -2747 567 125 1826 135 21 0 chr2 222856813 222857101 -27830753 - AluJb SINE Alu -18 294 1 661 265 18 18 chr2 222857104 222857270 -27830584 - MER5A DNA MER1_type -7 182 17 516 225 107 75 chr2 222857496 222857683 -27830171 + MIR SINE MIR 66 258 -4 241 67 167 83 chr2 222858595 222858655 -27829199 + LTR54 LTR ERV1 402 466 -44 325 346 134 0 chr2 222858711 222858838 -27829016 + MLT1J2 LTR MaLR 189 332 -118 298 211 13 13 chr2 222858846 222858922 -27828932 + MLT1J1 LTR MaLR 371 446 0 291 331 25 0 chr2 222858922 222859041 -27828813 + MARNA DNA Mariner 180 301 -285 281 333 0 0 chr2 222859103 222859202 -27828652 + MARNA DNA Mariner 403 501 -85 519 228 61 78 chr2 222859497 222859626 -27828228 - MIR3 SINE MIR -7 201 74 1867 117 82 63 chr2 222859626 222859993 -27827861 + THE1C LTR MaLR 2 375 0 519 228 61 78 chr2 222859993 222860043 -27827811 - MIR3 SINE MIR -134 74 25 226 250 48 60 chr2 222861011 222861095 -27826759 - REP3 LTR ERV -70 492 410 1903 156 3 0 chr2 222861391 222861686 -27826168 - AluJo SINE Alu -16 296 1 581 327 80 46 chr2 222862346 222862847 -27825007 + L2 LINE L2 2684 3198 -74 1133 149 0 0 chr2 222863101 222863282 -27824572 - AluJo SINE Alu -12 300 120 337 149 0 0 chr2 222863306 222863353 -27824501 + Alu SINE Alu 1 47 -253 432 198 174 0 chr2 222863376 222863462 -27824392 - AluJ/FLAM SINE Alu -210 102 2 342 243 110 22 chr2 222863829 222863965 -27823889 + MIR SINE MIR 6 153 -109 438 321 111 19 chr2 222866784 222866946 -27820908 + MIR3 SINE MIR 4 180 -28 424 242 29 145 chr2 222867019 222867429 -27820425 + MLT1I LTR MaLR 83 409 0 2105 74 7 11 chr2 222869524 222869830 -27818024 - AluY SINE Alu 0 305 1 183 138 0 0 chr2 222870138 222870167 -27817687 + MIR3 SINE MIR 176 204 -4 618 324 74 34 chr2 222870230 222870770 -27817084 - L2 LINE L2 0 3272 2709 325 302 116 32 chr2 222871682 222871871 -27815983 + MIR SINE MIR 20 224 -38 854 279 46 0 chr2 222871951 222872188 -27815666 + MIR SINE MIR 13 260 -2 1750 150 20 13 chr2 222872364 222872664 -27815190 - AluJo SINE Alu -10 302 1 195 42 0 0 chr2 222873588 222873612 -27814242 + (CA)n Simple_repeat Simple_repeat 2 25 0 228 323 0 11 chr2 222874123 222874216 -27813638 + CT-rich Low_complexity Low_complexity 3 94 0 193 309 111 12 chr2 222874231 222874312 -27813542 + MER5A DNA MER1_type 13 101 -88 227 233 0 14 chr2 222874486 222874559 -27813295 + CT-rich Low_complexity Low_complexity 2 73 0 384 273 84 0 chr2 222875382 222875525 -27812329 - MER102b DNA MER1_type 0 341 187 1274 175 4 4 chr2 222875761 222875989 -27811865 - AluJb SINE Alu -7 305 78 299 307 43 100 chr2 222876131 222876411 -27811443 + L2 LINE L2 2956 3219 -53 262 360 20 0 chr2 222876502 222876602 -27811252 + L2 LINE L2 3193 3294 -19 1637 144 62 0 chr2 222877560 222877851 -27810003 + AluSx SINE Alu 3 311 -1 210 247 188 0 chr2 222878108 222878193 -27809661 + L3b LINE CR1 1303 1403 -180 222 241 69 0 chr2 222878268 222878326 -27809528 - MIR SINE MIR -83 125 64 1773 42 0 0 chr2 222878883 222879097 -27808757 + L1PA4 LINE L1 5939 6152 -3 532 289 64 41 chr2 222879109 222879261 -27808593 + MIR SINE MIR 20 180 -82 1777 156 0 17 chr2 222879261 222879563 -27808291 - AluJb SINE Alu -15 297 1 532 289 64 41 chr2 222879563 222879628 -27808226 + MIR SINE MIR 180 242 -20 1509 127 13 4 chr2 222880071 222880307 -27807547 + MER34B LTR ERV1 2 239 -326 240 158 0 0 chr2 222880307 222880364 -27807490 + (TA)n Simple_repeat Simple_repeat 1 57 0 649 99 0 0 chr2 222880364 222880455 -27807399 - AluY SINE Alu -3 308 218 1434 188 38 41 chr2 222880462 222880802 -27807052 + MER34B LTR ERV1 221 559 -6 355 271 75 9 chr2 222881166 222881273 -27806581 + MIR SINE MIR 7 120 -142 3691 251 70 23 chr2 222881283 222882613 -27805241 - L2 LINE L2 -2 3311 1912 719 231 50 11 chr2 222882613 222882795 -27805059 - L2 LINE L2 -1883 1431 1243 274 211 0 0 chr2 222882856 222882908 -27804946 + MIR SINE MIR 209 260 -2 181 178 267 0 chr2 222883125 222883170 -27804684 - MIR SINE MIR -61 147 91 200 222 0 0 chr2 222884867 222884912 -27802942 + A-rich Low_complexity Low_complexity 1 45 0 357 225 22 22 chr2 222885902 222885991 -27801863 - MER5A DNA MER1_type -3 186 98 191 321 0 18 chr2 222886126 222886182 -27801672 - MIR SINE MIR -2 260 206 316 295 11 0 chr2 222886182 222886277 -27801577 + MIR SINE MIR 42 137 -125 196 347 0 0 chr2 222886337 222886386 -27801468 - MIR SINE MIR -18 244 196 244 282 26 13 chr2 222886459 222886537 -27801317 + MIR SINE MIR 122 200 -62 1164 142 12 10 chr2 222886546 222886800 -27801054 - AluJo SINE Alu -1 311 2 2153 114 0 0 chr2 222887162 222887470 -27800384 + AluSg SINE Alu 1 308 -2 1263 107 0 16 chr2 222887476 222887663 -27800191 + AluSg/x SINE Alu 120 303 -9 1791 108 0 15 chr2 222888809 222889077 -27798777 - AluSp SINE Alu -14 299 36 1950 134 13 7 chr2 222889553 222889860 -27797994 - AluJb SINE Alu -3 309 1 387 277 108 0 chr2 222890150 222890280 -27797574 - L1ME LINE L1 -460 5661 5518 233 354 46 34 chr2 222890719 222890894 -27796960 - L3b LINE CR1 -82 1501 1325 313 247 107 56 chr2 222891007 222891238 -27796616 - MLT1H LTR MaLR -31 518 202 230 302 0 0 chr2 222891347 222891410 -27796444 - MLT1H LTR MaLR -486 63 1 288 254 0 0 chr2 222891411 222891474 -27796380 + MIR SINE MIR 78 140 -122 342 265 20 86 chr2 222891554 222891666 -27796188 - L1MCa LINE L1 -4317 2109 2008 1602 175 4 11 chr2 222891666 222891940 -27795914 - AluJb SINE Alu -40 272 1 342 265 20 86 chr2 222891940 222891978 -27795876 - L1MCa LINE L1 -4418 2008 1969 513 242 65 0 chr2 222893072 222893196 -27794658 + MIR SINE MIR 91 222 -40 2257 60 0 33 chr2 222893521 222893822 -27794032 - AluY SINE Alu -20 291 1 2174 128 0 0 chr2 222893910 222894222 -27793632 + AluSx SINE Alu 1 312 0 1885 114 4 0 chr2 222894750 222895035 -27792819 + AluSx SINE Alu 22 307 0 295 296 45 30 chr2 222895155 222895287 -27792567 + L2 LINE L2 2926 3059 -213 471 353 13 7 chr2 222895533 222895686 -27792168 - L2 LINE L2 0 3272 3119 1407 278 76 21 chr2 222895814 222895853 -27792001 - LTR16B LTR ERVL -4 460 425 1844 182 55 11 chr2 222895853 222896232 -27791622 + MSTD LTR MaLR 1 396 0 1407 278 76 21 chr2 222896232 222896628 -27791226 - LTR16B LTR ERVL -39 425 1 189 213 0 0 chr2 222897059 222897106 -27790748 + (TGAA)n Simple_repeat Simple_repeat 4 50 0 2422 64 0 0 chr2 222898008 222898305 -27789549 - AluY SINE Alu -12 299 3 25 0 0 0 chr2 222898537 222898562 -27789292 + AT_rich Low_complexity Low_complexity 1 25 0 387 0 0 0 chr2 222899117 222899160 -27788694 + (TG)n Simple_repeat Simple_repeat 2 44 0 279 305 38 8 chr2 222899594 222899725 -27788129 + MIR SINE MIR 12 146 -116 988 95 18 36 chr2 222899893 222899953 -27787901 - L1MA5A LINE L1 -4 6293 6233 2289 116 73 14 chr2 222899953 222900297 -27787557 + THE1B LTR MaLR 1 364 0 988 95 18 36 chr2 222900297 222900404 -27787450 - L1MA5A LINE L1 -64 6233 6129 289 277 0 0 chr2 222900405 222900470 -27787384 - L2 LINE L2 0 3313 3249 312 148 0 0 chr2 222900473 222900527 -27787327 - MER33 DNA MER1_type -1 362 309 906 180 0 3 chr2 222900549 222900793 -27787061 - AluJb SINE Alu -1 311 1 1369 164 47 24 chr2 222900793 222901088 -27786766 - MER33 DNA MER1_type -38 286 1 571 322 61 9 chr2 222901220 222901434 -27786420 - MIR SINE MIR -4 258 34 1993 120 33 4 chr2 222901741 222902016 -27785838 + AluSg SINE Alu 1 283 -27 477 0 0 0 chr2 222902016 222902069 -27785785 + (CA)n Simple_repeat Simple_repeat 2 54 0 462 250 16 73 chr2 222902297 222902362 -27785492 + Charlie8 DNA MER1_type 85 152 -2265 1785 163 7 27 chr2 222902362 222902657 -27785197 - AluJb SINE Alu -23 289 1 462 250 16 73 chr2 222902657 222902783 -27785071 + Charlie8 DNA MER1_type 152 265 -2152 2110 119 14 0 chr2 222902826 222903120 -27784734 + AluSx SINE Alu 1 298 -14 433 285 58 29 chr2 222903609 222903746 -27784108 + MIR SINE MIR 13 153 -109 1077 152 104 70 chr2 222903752 222903982 -27783872 - MER8 DNA MER2_type -1 238 1 204 233 33 0 chr2 222903982 222904042 -27783812 + MIR SINE MIR 201 262 0 354 303 92 0 chr2 222904667 222904819 -27783035 + MIR3 SINE MIR 22 187 -21 16172 169 49 29 chr2 222905222 222907356 -27780498 + L1M2 LINE L1 3 2093 -4755 2445 84 0 3 chr2 222907356 222907667 -27780187 + AluSg SINE Alu 1 310 0 16172 169 49 29 chr2 222907667 222908278 -27779576 + L1M2 LINE L1 2093 2690 -4158 1962 146 0 23 chr2 222908278 222908633 -27779221 + AluSx SINE Alu 1 312 0 16172 169 49 29 chr2 222908633 222910753 -27777101 + L1M2 LINE L1 2690 4767 -2081 258 56 0 0 chr2 222910753 222910789 -27777065 + (CA)n Simple_repeat Simple_repeat 1 36 0 16172 169 49 29 chr2 222910789 222911666 -27776188 + L1M2 LINE L1 4767 5867 -981 2655 7 0 0 chr2 222911666 222912025 -27775829 + AluY SINE Alu 1 359 0 16172 169 49 29 chr2 222912025 222912071 -27775783 + L1M2 LINE L1 5867 5911 -937 675 92 50 25 chr2 222912071 222912189 -27775665 + L1MA4A LINE L1 6175 6297 -6 5141 66 33 65 chr2 222912280 222912330 -27775524 + SVA Other Other 9 59 -1327 1220 0 0 53 chr2 222912330 222912520 -27775334 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 5141 66 33 65 chr2 222912520 222913258 -27774596 + SVA Other Other 59 772 -614 2056 131 16 0 chr2 222963266 222963572 -27724282 + Tigger1 DNA MER2_type 953 1263 -1155 246 214 0 102 chr2 222963573 222963671 -27724183 + L1MC4 LINE L1 6616 6703 -1339 224 215 31 0 chr2 222963672 222963737 -27724117 + (TATG)n Simple_repeat Simple_repeat 4 70 0 337 333 0 0 chr2 222963747 222963837 -27724017 + L1MC4 LINE L1 6614 6703 -1339 332 322 11 0 chr2 222963840 222963930 -27723924 + L1MC4 LINE L1 6615 6705 -1337 301 289 26 0 chr2 222963940 222964016 -27723838 - L1MC4 LINE L1 -1350 6692 6615 225 119 0 0 chr2 222964017 222964059 -27723795 - LTR66 LTR ERVL -171 439 398 1907 116 18 3 chr2 222964086 222964370 -27723484 - AluSx SINE Alu -24 288 1 5616 106 6 5 chr2 222964370 222965169 -27722685 + Tigger1 DNA MER2_type 1248 2047 -371 1460 115 24 0 chr2 222965169 222965378 -27722476 + AluSq SINE Alu 1 214 -99 2217 112 0 0 chr2 222965885 222966190 -27721664 + AluSx SINE Alu 1 305 -7 245 208 14 28 chr2 222966653 222966725 -27721129 + (TCTG)n Simple_repeat Simple_repeat 2 72 0 207 0 0 0 chr2 222966842 222966865 -27720989 + (A)n Simple_repeat Simple_repeat 1 23 0 311 241 12 36 chr2 222966865 222966948 -27720906 + L1ME LINE L1 5558 5638 -483 1507 116 0 5 chr2 222966971 222967187 -27720667 + AluSx SINE Alu 3 217 -95 509 293 114 55 chr2 222967429 222968119 -27719735 + L2 LINE L2 2575 3309 -4 213 159 48 48 chr2 222968123 222968138 -27719716 + (TGAA)n Simple_repeat Simple_repeat 2 16 -48 1470 174 3 28 chr2 222968138 222968451 -27719403 + AluJb SINE Alu 1 306 0 213 159 48 48 chr2 222968451 222968496 -27719358 + (TGAA)n Simple_repeat Simple_repeat 15 64 0 305 312 113 14 chr2 222969280 222969421 -27718433 + MIR3 SINE MIR 42 196 -12 2177 117 0 0 chr2 222969686 222969993 -27717861 + AluSx SINE Alu 1 307 -5 252 191 0 21 chr2 222969993 222970040 -27717814 - LTR67 LTR ERVL -7 550 505 267 275 113 49 chr2 222970469 222970582 -27717272 + MER91A DNA MER1_type 46 171 -25 1109 233 70 67 chr2 222970582 222970955 -27716899 + MLT1A2 LTR MaLR 1 374 0 267 275 113 49 chr2 222970955 222970983 -27716871 + MER91A DNA MER1_type 171 196 0 246 254 194 0 chr2 222970983 222971049 -27716805 + MIR3 SINE MIR 118 196 -12 530 172 10 0 chr2 222971127 222971226 -27716628 - MER53 DNA DNA -1 188 89 2101 111 0 26 chr2 222971983 222972289 -27715565 - AluSq SINE Alu -15 298 1 204 241 69 35 chr2 222972314 222972372 -27715482 - MIR3 SINE MIR -3 205 146 * 219 338 12 50 chr2 222972337 222972417 -27715437 + MER5A DNA MER1_type 58 134 -55 275 239 164 0 chr2 222972487 222972554 -27715300 - MIR SINE MIR -64 144 67 872 187 56 79 chr2 222972748 222972962 -27714892 - MLT1A2 LTR MaLR -165 209 1 385 347 20 20 chr2 222973074 222973221 -27714633 - MIR SINE MIR -69 193 47 237 98 0 0 chr2 222973631 222973672 -27714182 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 278 275 0 130 chr2 222973676 222973814 -27714040 + MER112 DNA MER1_type 108 227 -33 789 170 67 12 chr2 222974915 222975080 -27712774 - MER5B DNA MER1_type -4 174 1 443 259 19 9 chr2 222975087 222975195 -27712659 + MER5A DNA MER1_type 4 112 -77 627 221 9 0 chr2 222975501 222975614 -27712240 - MER81 DNA DNA 0 114 1 558 290 115 67 chr2 222975789 222976216 -27711638 - L2 LINE L2 -1 3271 2798 2327 132 114 8 chr2 222976216 222976603 -27711251 + MSTA LTR MaLR 1 428 0 558 290 115 67 chr2 222976603 222976846 -27711008 - L2 LINE L2 -474 2798 2568 1613 94 0 17 chr2 222976926 222977159 -27710695 + AluSg/x SINE Alu 81 309 0 340 253 77 0 chr2 222977239 222977330 -27710524 - L1MD3 LINE L1 -10 7985 7888 2612 95 5 29 chr2 222977330 222977428 -27710426 + MER41A LTR ERV1 1 100 -454 2167 107 3 7 chr2 222977428 222977737 -27710117 - AluSp SINE Alu -5 308 1 2612 95 5 29 chr2 222977737 222978016 -27709838 + MER41A LTR ERV1 100 369 -185 560 263 65 5 chr2 222978118 222978304 -27709550 - L1MC4a LINE L1 -192 7616 7420 181 182 146 18 chr2 222978326 222978381 -27709473 + L2 LINE L2 3193 3254 -59 212 269 114 107 chr2 222978610 222979012 -27708842 - L2 LINE L2 -17 3255 2851 229 159 32 16 chr2 222979343 222979406 -27708448 + (CATGC)n Simple_repeat Simple_repeat 5 68 0 224 318 8 0 chr2 222979457 222979589 -27708265 + C-rich Low_complexity Low_complexity 6 138 0 223 261 68 50 chr2 222979532 222979693 -27708161 + (CACAC)n Simple_repeat Simple_repeat 5 168 0 * 280 198 42 52 chr2 222979726 222979822 -27708032 + (CACAC)n Simple_repeat Simple_repeat 4 98 0 236 319 56 0 chr2 222980078 222980150 -27707704 + L2 LINE L2 3230 3305 -8 763 89 0 0 chr2 222980638 222980739 -27707115 + HY3 scRNA scRNA 1 101 0 40 0 0 0 chr2 222980739 222980779 -27707075 + AT_rich Low_complexity Low_complexity 1 40 0 292 247 12 74 chr2 222980873 222980954 -27706900 + L2 LINE L2 3198 3273 -40 204 277 0 0 chr2 222980968 222981015 -27706839 + MIR SINE MIR 101 147 -61 816 170 0 0 chr2 222981751 222981892 -27705962 - FLAM_C SINE Alu -2 141 1 571 298 136 38 chr2 222981892 222982208 -27705646 + L2 LINE L2 2925 3271 -1 1404 127 177 19 chr2 222982745 222983005 -27704849 + AluJo SINE Alu 2 302 0 1936 178 9 0 chr2 222983011 222983337 -27704517 + Tigger1 DNA MER2_type 2087 2415 -3 424 296 101 11 chr2 222983395 222983584 -27704270 + MIR SINE MIR 54 259 -3 195 184 0 0 chr2 222984037 222984075 -27703779 + (TG)n Simple_repeat Simple_repeat 2 39 0 507 197 56 70 chr2 222984094 222984236 -27703618 + MIR SINE MIR 89 228 -34 186 138 35 0 chr2 222984213 222984242 -27703612 + L2 LINE L2 3210 3239 -33 * 913 211 95 26 chr2 222985474 222985529 -27702325 + MIR SINE MIR 3 53 -209 424 272 59 92 chr2 222985529 222985952 -27701902 - MLT1I LTR MaLR 0 409 1 913 211 95 26 chr2 222985952 222986128 -27701726 + MIR SINE MIR 53 250 -12 557 289 102 19 chr2 222986396 222986793 -27701061 - LTR33 LTR ERVL -2 519 56 284 25 50 0 chr2 222987151 222987191 -27700663 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 624 310 26 31 chr2 222987232 222987461 -27700393 + MLT1K LTR MaLR 67 294 -294 974 204 9 18 chr2 222987536 222987756 -27700098 - MER20 DNA MER1_type 0 219 2 808 328 79 8 chr2 222987757 222988111 -27699743 + MLT1L LTR MaLR 148 526 -89 2020 67 0 4 chr2 222988130 222988397 -27699457 + AluY SINE Alu 1 266 -45 451 199 71 7 chr2 222988692 222988833 -27699021 + L1ME4a LINE L1 5972 6121 0 215 405 107 5 chr2 222989102 222989317 -27698537 - L2 LINE L2 -32 3240 3004 276 304 68 50 chr2 222989323 222989484 -27698370 - MIR SINE MIR -1 261 98 580 296 101 46 chr2 222989484 222989980 -27697874 + LTR33A LTR ERVL 1 523 0 229 241 69 17 chr2 222989980 222990038 -27697816 - MIR SINE MIR -173 89 29 652 296 104 0 chr2 222990045 222990265 -27697589 - MIR SINE MIR -1 261 19 183 156 0 0 chr2 222990933 222990965 -27696889 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 465 232 73 20 chr2 222992059 222992210 -27695644 - MIR3 SINE MIR -12 196 38 228 273 30 71 chr2 222992848 222992947 -27694907 - L2 LINE L2 -27 3286 3192 357 282 158 37 chr2 222993214 222993455 -27694399 - Charlie8 DNA MER1_type -2147 270 1 310 196 155 21 chr2 222993463 222993560 -27694294 - MIR SINE MIR -33 229 120 215 192 23 63 chr2 222994539 222994572 -27693282 + MIR SINE MIR 88 105 -103 2093 139 0 0 chr2 222994572 222994882 -27692972 - AluSx SINE Alu -2 310 1 215 192 23 63 chr2 222994882 222994923 -27692931 + MIR SINE MIR 105 146 -62 2127 106 0 0 chr2 222995928 222996308 -27691546 - AluSx SINE Alu 0 380 1 471 220 133 20 chr2 222996352 222996502 -27691352 - L1MC5 LINE L1 -48 7913 7747 21 0 0 0 chr2 222996540 222996561 -27691293 + AT_rich Low_complexity Low_complexity 1 21 0 638 270 116 21 chr2 222997432 222997665 -27690189 - MIR SINE MIR -6 256 2 1205 205 9 124 chr2 222997726 222997777 -27690077 - L1MC4a LINE L1 0 7808 7753 2290 81 3 0 chr2 222997777 222998073 -27689781 + AluSq SINE Alu 1 297 -16 1205 205 9 124 chr2 222998073 222998373 -27689481 - L1MC4a LINE L1 -55 7753 7604 1543 190 14 0 chr2 222998373 222998657 -27689197 - AluJb SINE Alu -24 288 1 1205 205 9 124 chr2 222998657 222998747 -27689107 - L1MC4a LINE L1 -204 7604 7505 703 292 29 21 chr2 222999101 222999341 -27688513 - MIR SINE MIR -14 248 7 295 298 0 44 chr2 222999624 222999738 -27688116 - MIR SINE MIR 0 262 154 248 302 52 35 chr2 222999774 222999890 -27687964 + MLT1J1 LTR MaLR 44 161 -285 440 200 18 45 chr2 223000069 223000179 -27687675 - MLT1J2 LTR MaLR 0 450 344 3812 152 6 27 chr2 223000326 223000950 -27686904 + LTR36 LTR ERV1 1 611 0 2140 125 80 38 chr2 223001056 223001366 -27686488 + L1MC1 LINE L1 5891 6225 -108 797 118 0 125 chr2 223001366 223001518 -27686336 - FLAM_C SINE Alu 0 133 1 2140 125 80 38 chr2 223001518 223001632 -27686222 + L1MC1 LINE L1 6225 6333 0 794 223 42 21 chr2 223001644 223001882 -27685972 + MER113 DNA MER1_type? 213 455 -66 479 320 6 19 chr2 223002505 223002661 -27685193 - MIR SINE MIR -108 154 1 214 283 75 0 chr2 223002921 223002974 -27684880 - L2 LINE L2 -10 3262 3206 189 209 0 70 chr2 223004531 223004574 -27683280 - MIR3 SINE MIR -24 184 145 * 341 289 176 10 chr2 223004563 223004767 -27683087 - L3 LINE CR1 -126 1451 1214 286 360 9 9 chr2 223004820 223004931 -27682923 - L2 LINE L2 -9 3304 3194 2041 274 116 21 chr2 223004937 223005569 -27682285 + MER115 DNA AcHobo 1 692 -1 231 324 95 0 chr2 223006112 223006186 -27681668 - L3b LINE CR1 -207 1376 1296 214 346 65 19 chr2 223006367 223006474 -27681380 + L2 LINE L2 3151 3262 -10 518 227 70 23 chr2 223006662 223006790 -27681064 - MIR SINE MIR -39 223 90 1146 315 37 20 chr2 223007034 223007488 -27680366 + L2 LINE L2 2852 3313 0 296 188 14 0 chr2 223007828 223007897 -27679957 + CT-rich Low_complexity Low_complexity 1 70 0 201 129 0 0 chr2 223012941 223012972 -27674882 + (CCG)n Simple_repeat Simple_repeat 3 33 0 357 240 0 110 chr2 223013062 223013262 -27674592 + GA-rich Low_complexity Low_complexity 2 179 0 347 254 69 23 chr2 223013704 223013834 -27674020 + L2 LINE L2 3171 3306 -7 225 0 0 0 chr2 223014232 223014257 -27673597 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 261 0 0 0 chr2 223014256 223014285 -27673569 + (CA)n Simple_repeat Simple_repeat 1 29 0 22 70 0 0 chr2 223014609 223014652 -27673202 + AT_rich Low_complexity Low_complexity 1 43 0 256 363 70 32 chr2 223014774 223014931 -27672923 + L2 LINE L2 3110 3272 0 2213 99 10 0 chr2 223015156 223015460 -27672394 + AluSp SINE Alu 1 307 -6 467 0 35 0 chr2 223015465 223015523 -27672331 + (GAAA)n Simple_repeat Simple_repeat 2 61 0 2235 101 0 3 chr2 223015648 223015955 -27671899 + AluSx SINE Alu 1 306 -6 207 289 0 0 chr2 223016134 223016186 -27671668 - L2 LINE L2 0 3313 3262 183 314 186 0 chr2 223016422 223016508 -27671346 - L2 LINE L2 -264 3049 2948 187 303 42 92 chr2 223017082 223017201 -27670653 - MIR SINE MIR -66 142 30 411 328 0 31 chr2 223017325 223017453 -27670401 + MER5A DNA MER1_type 38 161 -28 * 512 332 65 5 chr2 223017430 223017629 -27670225 - MIR SINE MIR -50 212 2 327 272 151 0 chr2 223017730 223017867 -27669987 + MLT1E LTR MaLR 1 179 -388 1618 187 0 19 chr2 223017867 223018182 -27669672 + AluSx SINE Alu 1 309 -3 854 150 7 0 chr2 223018182 223018335 -27669519 + GA-rich Low_complexity Low_complexity 1 154 0 1460 220 48 30 chr2 223018379 223018715 -27669139 + MLT1E LTR MaLR 206 547 -46 388 223 107 58 chr2 223019019 223019140 -27668714 + L2 LINE L2 3180 3306 -7 301 130 0 0 chr2 223019394 223019440 -27668414 + MLT1F LTR MaLR 495 540 -2 287 356 31 43 chr2 223019637 223019800 -27668054 - MER5A DNA MER1_type -28 161 1 766 287 100 33 chr2 223020022 223020596 -27667258 - L2 LINE L2 -58 3255 2641 416 282 109 23 chr2 223020550 223020724 -27667130 + MIR3 SINE MIR 9 197 -11 * 266 263 0 32 chr2 223021993 223022088 -27665766 + L1ME3 LINE L1 6070 6161 -1 5871 150 23 0 chr2 223022163 223023076 -27664778 + Tigger1 DNA MER2_type 2 935 -1483 231 69 0 0 chr2 223023176 223023205 -27664649 - Alu SINE Alu -270 29 1 239 212 47 59 chr2 223023310 223023395 -27664459 + MLT1K LTR MaLR 505 588 0 21 0 0 0 chr2 223023581 223023602 -27664252 + AT_rich Low_complexity Low_complexity 1 21 0 592 278 34 29 chr2 223023703 223023908 -27663946 - MIR3 SINE MIR 0 208 3 1758 141 3 26 chr2 223024043 223024334 -27663520 + AluSx SINE Alu 1 286 -26 198 0 0 0 chr2 223024334 223024356 -27663498 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1758 141 3 26 chr2 223024356 223024368 -27663486 + AluSx SINE Alu 286 297 -15 1755 168 0 0 chr2 223025293 223025590 -27662264 + AluJb SINE Alu 1 297 -15 190 263 0 0 chr2 223026853 223026891 -27660963 - L2 LINE L2 -42 3230 3193 197 274 16 16 chr2 223027067 223027129 -27660725 - MIR3 SINE MIR -23 185 124 2265 180 31 7 chr2 223027293 223027716 -27660138 + MLT1C LTR MaLR 35 467 0 1322 303 52 15 chr2 223028259 223028738 -27659116 - L2 LINE L2 0 3313 2817 1938 148 7 0 chr2 223028799 223029097 -27658757 + AluSx SINE Alu 1 300 -12 1797 206 150 21 chr2 223029168 223029640 -27658214 - MLT1F LTR MaLR -9 533 1 2072 179 13 15 chr2 223030426 223030823 -27657031 + MSTD LTR MaLR 1 396 0 1363 283 39 36 chr2 223030969 223031528 -27656326 + MER20B DNA MER1_type 28 588 -195 931 191 0 0 chr2 223033380 223033542 -27654312 - FAM SINE Alu -18 167 6 250 198 116 47 chr2 223033701 223033787 -27654067 - L1M4 LINE L1 -1323 4823 4732 572 251 61 0 chr2 223033796 223033959 -27653895 - MIR SINE MIR 0 262 90 257 263 105 9 chr2 223033969 223034083 -27653771 + L1MC4a LINE L1 5885 6009 -1799 22 35 0 0 chr2 223034128 223034157 -27653697 + AT_rich Low_complexity Low_complexity 1 29 0 479 222 119 8 chr2 223034219 223034345 -27653509 - MER69A DNA AcHobo -1 176 37 34 19 0 19 chr2 223034468 223034496 -27653358 + AT_rich Low_complexity Low_complexity 1 29 -22 1918 137 3 0 chr2 223034496 223034781 -27653073 + AluSx SINE Alu 2 287 -25 34 19 0 19 chr2 223034781 223034804 -27653050 + AT_rich Low_complexity Low_complexity 29 51 0 221 272 110 59 chr2 223035600 223035736 -27652118 + L3b LINE CR1 1303 1445 -138 201 74 0 0 chr2 223036158 223036185 -27651669 + (GA)n Simple_repeat Simple_repeat 2 28 0 2314 88 0 0 chr2 223036273 223036579 -27651275 + AluSx SINE Alu 1 306 -6 214 326 67 11 chr2 223036850 223036939 -27650915 + MIR SINE MIR 35 128 -134 897 123 0 29 chr2 223037040 223037178 -27650676 + AluJo SINE Alu 9 142 -170 335 255 78 0 chr2 223037662 223037764 -27650090 + MIR SINE MIR 116 225 -37 391 321 63 36 chr2 223039133 223039354 -27648500 + HAL1b LINE L1 1115 1341 -7 2076 86 18 0 chr2 223039856 223040134 -27647720 - AluSq SINE Alu -7 306 24 282 348 50 19 chr2 223041459 223041620 -27646234 - MIR SINE MIR -43 219 54 216 211 132 26 chr2 223041684 223041760 -27646094 + MIR SINE MIR 43 126 -82 688 264 186 0 chr2 223042201 223042421 -27645433 - MIR SINE MIR 0 262 2 1993 155 45 13 chr2 223042996 223043371 -27644483 - MLT1B LTR MaLR -2 388 2 1875 135 10 3 chr2 223043629 223043918 -27643936 - AluSx SINE Alu -21 291 1 310 297 90 57 chr2 223044055 223044267 -27643587 - L1M4 LINE L1 -3528 2618 2400 363 163 57 73 chr2 223044340 223044463 -27643391 - L1ME4a LINE L1 -70 6051 5931 358 278 136 44 chr2 223044637 223044910 -27642944 - L1ME4a LINE L1 -295 5826 5529 315 221 169 44 chr2 223044962 223045098 -27642756 - L1ME4a LINE L1 -2391 5417 5265 1841 164 3 0 chr2 223045447 223045758 -27642096 + AluJb SINE Alu 1 312 0 256 316 0 13 chr2 223046490 223046569 -27641285 - L3b LINE CR1 -224 1359 1282 719 246 28 11 chr2 223046599 223046778 -27641076 - MER5A DNA MER1_type -1 188 7 337 246 74 33 chr2 223046783 223046905 -27640949 - MER5B DNA MER1_type -2 176 50 1879 116 48 14 chr2 223046996 223047288 -27640566 - AluSq SINE Alu -11 302 1 1806 94 72 7 chr2 223047803 223048079 -27639775 + AluSx SINE Alu 1 294 -18 701 245 71 14 chr2 223048655 223048867 -27638987 - MIR SINE MIR -1 261 38 209 346 63 0 chr2 223048886 223049013 -27638841 + MIR SINE MIR 123 257 -5 180 374 80 25 chr2 223049097 223049260 -27638594 + L2 LINE L2 3101 3272 0 215 284 68 0 chr2 223050320 223050408 -27637446 + MIR3 SINE MIR 75 168 -40 880 116 16 0 chr2 223050623 223050752 -27637102 - AluSx SINE Alu -15 295 165 2596 201 65 85 chr2 223050767 223051685 -27636169 - MER52A LTR ERV1 -53 1702 664 1238 117 0 0 chr2 223051690 223051861 -27635993 - AluSx SINE Alu -141 171 1 714 293 114 15 chr2 223054679 223055148 -27632706 - MLT1K LTR MaLR -4 584 37 323 302 32 32 chr2 223056068 223056194 -27631660 - MIR3 SINE MIR -45 163 38 669 296 56 9 chr2 223057230 223057443 -27630411 - MIR SINE MIR -10 252 30 1941 106 102 0 chr2 223057717 223057992 -27629862 - AluSq SINE Alu -10 303 1 209 200 0 0 chr2 223058874 223058924 -27628930 + T-rich Low_complexity Low_complexity 1 50 0 981 124 29 0 chr2 223058941 223059078 -27628776 - AluJb SINE Alu -171 141 1 21 0 0 0 chr2 223059083 223059104 -27628750 + AT_rich Low_complexity Low_complexity 1 21 0 264 214 48 36 chr2 223059119 223059203 -27628651 - MIR SINE MIR -75 187 103 640 121 0 20 chr2 223059703 223059802 -27628052 - FLAM_C SINE Alu -8 135 39 2356 86 3 7 chr2 223060397 223060700 -27627154 - AluSp SINE Alu -8 305 4 236 209 0 0 chr2 223061216 223061259 -27626595 + MER5B DNA MER1_type 7 49 -129 2446 92 0 0 chr2 223061510 223061814 -27626040 - AluSq SINE Alu -9 304 1 291 244 53 53 chr2 223062377 223062508 -27625346 - MIR SINE MIR -112 150 20 532 245 61 6 chr2 223063034 223063197 -27624657 - MIR SINE MIR -17 245 74 183 80 0 0 chr2 223063331 223063356 -27624498 + (TA)n Simple_repeat Simple_repeat 2 26 0 211 240 135 39 chr2 223063725 223063829 -27624025 - MIR SINE MIR -63 145 32 315 44 0 22 chr2 223064472 223064517 -27623337 - MADE1 DNA Mariner -36 44 1 1966 120 74 0 chr2 223065329 223065612 -27622242 + AluSx SINE Alu 2 305 -7 1112 167 35 15 chr2 223066282 223066480 -27621374 - MER20 DNA MER1_type -2 217 16 21 0 0 0 chr2 223066922 223066943 -27620911 + AT_rich Low_complexity Low_complexity 1 21 0 479 225 123 26 chr2 223066956 223067250 -27620604 - L1ME4a LINE L1 -54 6067 5619 2284 109 0 3 chr2 223067681 223067985 -27619869 + AluSx SINE Alu 1 303 -9 379 308 87 10 chr2 223068176 223068384 -27619470 - L1MC4a LINE L1 -1908 5900 5677 1857 152 41 0 chr2 223068644 223068934 -27618920 + AluSx SINE Alu 1 302 -10 2056 121 9 25 chr2 223070049 223070364 -27617490 - AluSq SINE Alu -3 310 1 304 311 161 19 chr2 223072218 223072379 -27615475 - L2 LINE L2 -16 3256 3073 21 0 0 0 chr2 223073565 223073586 -27614268 + AT_rich Low_complexity Low_complexity 1 21 0 182 319 129 0 chr2 223073965 223074081 -27613773 + L2 LINE L2 2349 2479 -835 1064 164 0 0 chr2 223074233 223074398 -27613456 + AluSg/x SINE Alu 137 301 -11 1187 211 126 39 chr2 223074486 223074850 -27613004 - MSTD LTR MaLR 0 396 1 222 118 0 0 chr2 223074926 223074960 -27612894 + (T)n Simple_repeat Simple_repeat 1 34 0 206 301 70 70 chr2 223075143 223075286 -27612568 - L2 LINE L2 -8 3264 3122 2072 114 3 42 chr2 223075389 223075697 -27612157 - AluSx SINE Alu -16 296 1 355 243 56 9 chr2 223077130 223077237 -27610617 - MIR SINE MIR -56 152 41 297 230 81 11 chr2 223079907 223079994 -27607860 - MIR SINE MIR -1 261 169 630 261 50 5 chr2 223080032 223080231 -27607623 + MIR SINE MIR 55 262 0 44061 48 3 0 chr2 223080263 223086390 -27601464 + L1PA5 LINE L1 2 6148 -6 444 37 0 0 chr2 223086603 223086657 -27601197 + (TG)n Simple_repeat Simple_repeat 2 55 0 28 0 0 0 chr2 223086934 223086962 -27600892 + AT_rich Low_complexity Low_complexity 1 28 0 609 313 48 53 chr2 223087043 223087093 -27600761 - L1ME4a LINE L1 -257 5864 5815 1881 152 13 20 chr2 223087093 223087395 -27600459 + AluJb SINE Alu 1 300 -12 609 313 48 53 chr2 223087395 223087721 -27600133 - L1ME4a LINE L1 -306 5815 5490 1690 167 35 17 chr2 223088251 223088539 -27599315 + AluJb SINE Alu 1 293 -19 830 206 24 3 chr2 223088806 223089076 -27598778 - MLT1A1 LTR MaLR 0 365 20 2326 90 6 10 chr2 223089308 223089620 -27598234 + AluSx SINE Alu 1 311 -1 1698 165 0 14 chr2 223090423 223090720 -27597134 + AluJo SINE Alu 14 306 -6 218 253 80 100 chr2 223091867 223092017 -27595837 - MIR SINE MIR -46 216 70 2463 92 0 0 chr2 223092737 223093040 -27594814 + AluSx SINE Alu 2 304 -8 2028 126 28 0 chr2 223094274 223094560 -27593294 - AluSx SINE Alu -18 294 1 23 0 0 0 chr2 223094566 223094589 -27593265 + AT_rich Low_complexity Low_complexity 1 23 0 830 287 93 28 chr2 223094736 223094823 -27593031 - L1ME2 LINE L1 -217 5947 5867 2123 67 7 11 chr2 223094823 223095093 -27592761 - AluY SINE Alu -4 307 39 830 287 93 28 chr2 223095093 223095537 -27592317 - L1ME2 LINE L1 -297 5867 5358 189 0 0 0 chr2 223095537 223095558 -27592296 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 830 287 93 28 chr2 223095558 223095687 -27592167 - L1ME2 LINE L1 -806 5358 5239 1849 159 0 25 chr2 223095688 223096002 -27591852 - AluSx SINE Alu -6 306 1 1639 187 10 3 chr2 223096039 223096333 -27591521 - AluJo SINE Alu -16 296 1 252 0 0 0 chr2 223096386 223096414 -27591440 + (A)n Simple_repeat Simple_repeat 1 28 0 2010 138 10 3 chr2 223096904 223097201 -27590653 - AluSx SINE Alu -13 299 1 317 303 134 0 chr2 223097221 223097452 -27590402 + L1ME4a LINE L1 5545 5806 -315 1937 146 4 0 chr2 223097622 223097936 -27589918 + AluSx SINE Alu 3 317 0 286 228 244 0 chr2 223097942 223098069 -27589785 + L1ME4a LINE L1 5961 6118 -3 22 0 0 0 chr2 223098322 223098344 -27589510 + AT_rich Low_complexity Low_complexity 1 22 0 263 274 49 20 chr2 223098433 223098535 -27589319 + L1ME LINE L1 5566 5670 -451 320 149 75 0 chr2 223098559 223098626 -27589228 - L1MA10 LINE L1 -4 6330 6259 388 162 126 173 chr2 223098626 223098897 -27588957 - L1ME2 LINE L1 -104 6062 5805 180 111 0 0 chr2 223098907 223098934 -27588920 + (T)n Simple_repeat Simple_repeat 1 27 0 270 193 257 0 chr2 223098946 223099023 -27588831 - L1M1 LINE L1 -342 5824 5740 2075 323 56 21 chr2 223099342 223099967 -27587887 + L1MD1 LINE L1 5596 6242 0 1223 95 19 0 chr2 223100450 223100608 -27587246 - AluSg/x SINE Alu -15 295 135 30 0 0 0 chr2 223101013 223101043 -27586811 + AT_rich Low_complexity Low_complexity 1 30 0 1937 127 30 7 chr2 223101144 223101443 -27586411 - AluJb SINE Alu -6 306 1 189 287 81 44 chr2 223103563 223103699 -27584155 - MIR3 SINE MIR -60 148 8 695 197 27 7 chr2 223104130 223104277 -27583577 + AluJb SINE Alu 146 295 -17 831 128 25 73 chr2 223104516 223104614 -27583240 - AluJo SINE Alu -88 224 123 1706 169 19 7 chr2 223104614 223104922 -27582932 + AluJb SINE Alu 1 312 0 831 128 25 73 chr2 223104922 223105070 -27582784 - AluJo SINE Alu -189 123 1 975 182 0 28 chr2 223105096 223105277 -27582577 - L1MC3 LINE L1 -925 6860 6685 664 164 17 0 chr2 223106644 223106760 -27581094 + AluJb SINE Alu 191 308 -4 1804 149 38 3 chr2 223107084 223107372 -27580482 + AluJb SINE Alu 4 301 -11 223 335 84 0 chr2 223107763 223107918 -27579936 + L3 LINE CR1 1407 1574 -3 1906 146 0 10 chr2 223108479 223108781 -27579073 - AluJb SINE Alu -5 307 9 2247 117 0 3 chr2 223108791 223109098 -27578756 - AluSx SINE Alu -6 306 1 841 152 0 29 chr2 223109462 223109600 -27578254 + AluJo SINE Alu 1 134 -178 331 275 53 15 chr2 223110583 223110714 -27577140 - L2 LINE L2 0 3313 3178 819 191 110 0 chr2 223110730 223110903 -27576951 - MER58 DNA MER1_type -149 192 1 891 166 109 86 chr2 223110911 223110999 -27576855 - MER33 DNA MER1_type -2261 324 239 1892 95 36 0 chr2 223110999 223111251 -27576603 + AluSp SINE Alu 41 301 -12 891 166 109 86 chr2 223111251 223111344 -27576510 - MER33 DNA MER1_type -2346 239 150 2129 134 7 0 chr2 223111344 223111642 -27576212 + AluSx SINE Alu 1 300 -12 891 166 109 86 chr2 223111642 223111772 -27576082 - MER33 DNA MER1_type -2435 150 5 337 302 54 7 chr2 223111810 223111959 -27575895 - L2 LINE L2 -454 2860 2705 782 159 0 30 chr2 223111985 223112117 -27575737 - FLAM_C SINE Alu -14 129 2 24 0 0 0 chr2 223112119 223112143 -27575711 + AT_rich Low_complexity Low_complexity 1 24 0 29 0 0 0 chr2 223112171 223112200 -27575654 + AT_rich Low_complexity Low_complexity 1 29 0 278 279 98 39 chr2 223112212 223112549 -27575305 - L2 LINE L2 -633 2681 2325 484 302 116 0 chr2 223112563 223112778 -27575076 + LTR16A LTR ERVL 6 245 -205 738 70 20 0 chr2 223112780 223112880 -27574974 + Tigger3(Golem) DNA MER2_type 2806 2907 -122 307 342 93 6 chr2 223112931 223113092 -27574762 + LTR16A LTR ERVL 266 440 -10 193 297 166 35 chr2 223113106 223113335 -27574519 - L2 LINE L2 -997 2317 2059 2006 125 27 0 chr2 223113353 223113648 -27574206 - AluSx SINE Alu -9 303 1 531 259 94 5 chr2 223113836 223114037 -27573817 - MIR SINE MIR -16 246 28 1851 129 5 127 chr2 223115006 223115401 -27572453 + MER7A DNA MER2_type 2 346 0 2190 121 0 0 chr2 223116241 223116538 -27571316 - AluSx SINE Alu -15 297 1 2278 84 0 90 chr2 223117812 223118155 -27569699 + AluSx SINE Alu 1 312 0 539 258 20 7 chr2 223118187 223118338 -27569516 - L1M4 LINE L1 -1112 5034 4882 2234 89 3 7 chr2 223118391 223118684 -27569170 + AluSx SINE Alu 1 292 -20 535 118 0 0 chr2 223118944 223119047 -27568807 - AluSg/x SINE Alu 0 309 207 2045 167 17 60 chr2 223119053 223119473 -27568381 + MER57A LTR ERV1 2 403 0 198 0 0 0 chr2 223121050 223121072 -27566782 + (CAG)n Simple_repeat Simple_repeat 2 23 0 425 192 173 0 chr2 223121239 223121343 -27566511 + MIR3 SINE MIR 69 190 -18 271 202 170 11 chr2 223121434 223121528 -27566326 - L2 LINE L2 -7 3265 3157 3802 123 161 107 chr2 223121562 223121665 -27566189 - L1MC3 LINE L1 -2 7783 7687 2330 102 3 0 chr2 223121665 223121968 -27565886 - AluY SINE Alu -6 305 2 3802 123 161 107 chr2 223121968 223122411 -27565443 - L1MC3 LINE L1 -98 7687 7269 293 275 11 11 chr2 223122411 223122502 -27565352 - MLT1F1 LTR MaLR -442 125 35 3802 123 161 107 chr2 223122502 223122528 -27565326 - L1MC3 LINE L1 -516 7269 7246 2255 111 0 0 chr2 223122528 223122826 -27565028 + AluSg SINE Alu 1 298 -12 3802 123 161 107 chr2 223122826 223123176 -27564678 - L1MC3 LINE L1 -539 7246 6715 1354 175 111 4 chr2 223123178 223123459 -27564395 + AluJb SINE Alu 3 310 0 249 216 0 27 chr2 223123529 223123603 -27564251 - L1ME4a LINE L1 -2 6119 6048 252 274 0 0 chr2 223123796 223123858 -27563996 - MIR3 SINE MIR -3 205 144 302 320 130 0 chr2 223124045 223124145 -27563709 + MIR SINE MIR 3 115 -147 1284 185 16 24 chr2 223124156 223124405 -27563449 - AluJo SINE Alu -1 311 65 333 68 0 0 chr2 223124434 223124478 -27563376 + (A)n Simple_repeat Simple_repeat 1 44 0 314 262 39 39 chr2 223124478 223124581 -27563273 - MIR SINE MIR -148 114 12 758 147 0 0 chr2 223124772 223124881 -27562973 - AluJb SINE Alu -24 288 180 646 118 118 0 chr2 223125722 223125832 -27562022 - AluSg SINE Alu -186 124 2 295 214 205 0 chr2 223127822 223127934 -27559920 + Charlie5 DNA MER1_type 1 143 -2469 1935 143 24 3 chr2 223129011 223129304 -27558550 - AluSx SINE Alu -13 299 1 1662 171 28 14 chr2 223129333 223129620 -27558234 + AluSx SINE Alu 1 291 -21 285 186 349 0 chr2 223130477 223130563 -27557291 + MIR SINE MIR 14 129 -133 1608 162 34 27 chr2 223130692 223130988 -27556866 - AluSx SINE Alu -14 298 1 194 345 64 9 chr2 223131076 223131186 -27556668 - MIR3 SINE MIR -90 118 3 423 99 363 0 chr2 223132233 223132324 -27555530 + AluY SINE Alu 176 299 -12 306 250 57 93 chr2 223132327 223132430 -27555424 + MIR SINE MIR 19 117 -145 1920 124 31 17 chr2 223132430 223132720 -27555134 - AluSx SINE Alu -13 299 6 306 250 57 93 chr2 223132720 223132756 -27555098 + MIR SINE MIR 117 153 -109 1839 175 0 0 chr2 223133103 223133411 -27554443 - AluJb SINE Alu -2 310 3 1695 155 81 0 chr2 223134177 223134461 -27553393 - AluSx SINE Alu -5 307 1 1778 155 115 48 chr2 223134480 223134880 -27552974 - MSTA LTR MaLR -1 427 1 344 266 48 16 chr2 223134961 223135085 -27552769 - LTR33 LTR ERVL 0 521 394 632 295 104 0 chr2 223135186 223135379 -27552475 - LTR33 LTR ERVL -305 216 4 733 229 282 58 chr2 223135511 223135944 -27551910 - MLT1H LTR MaLR -8 541 12 1677 176 14 7 chr2 223136102 223136381 -27551473 - AluJb SINE Alu -31 281 1 1974 104 68 7 chr2 223136946 223137224 -27550630 + AluSx SINE Alu 3 297 -15 509 296 174 8 chr2 223138029 223138282 -27549572 + ERVL LTR ERVL 2019 2313 -3451 479 272 31 37 chr2 223138394 223138556 -27549298 + ERVL LTR ERVL 2487 2647 -3007 338 118 43 97 chr2 223138575 223138668 -27549186 + Charlie1 DNA MER1_type 2561 2648 -113 2208 102 10 7 chr2 223138668 223138961 -27548893 - AluSx SINE Alu -17 295 2 251 274 75 38 chr2 223138970 223139076 -27548778 + ERVL LTR ERVL 2697 2806 -2958 396 267 93 58 chr2 223139128 223139300 -27548554 + ERVL LTR ERVL 2932 3109 -2655 211 209 76 105 chr2 223139301 223139406 -27548448 + MIR3 SINE MIR 1 102 -106 1069 301 125 52 chr2 223139415 223140054 -27547800 + ERVL LTR ERVL 3202 3887 -1877 711 256 12 0 chr2 223140268 223140428 -27547426 + ERVL LTR ERVL 4347 4508 -1256 * 745 334 11 26 chr2 223140424 223140771 -27547083 + ERVL LTR ERVL 4681 5022 -742 1245 141 34 128 chr2 223140919 223141246 -27546608 - AluJo SINE Alu -16 296 1 329 273 0 41 chr2 223142038 223142159 -27545695 - L1MC4 LINE L1 -1339 6703 6588 184 167 42 0 chr2 223142184 223142232 -27545622 + (TA)n Simple_repeat Simple_repeat 1 50 0 459 167 67 78 chr2 223142375 223142555 -27545299 + L1M4 LINE L1 2234 2411 -3735 2044 145 0 16 chr2 223142709 223143026 -27544828 + AluJb SINE Alu 1 312 0 2038 121 7 36 chr2 223143194 223143501 -27544353 - AluSx SINE Alu -14 298 1 1963 167 0 0 chr2 223143653 223143940 -27543914 - AluJo SINE Alu -25 287 1 268 271 0 0 chr2 223145219 223145289 -27542565 - MIR SINE MIR -25 237 168 181 400 23 15 chr2 223145306 223145436 -27542418 + L2 LINE L2 2787 2917 -397 267 255 85 0 chr2 223145515 223145609 -27542245 - MIR SINE MIR -79 183 82 2359 95 0 0 chr2 223145710 223146006 -27541848 + AluSg SINE Alu 1 296 -14 1499 182 13 42 chr2 223146137 223146500 -27541354 - AluJb SINE Alu 0 312 1 256 273 94 47 chr2 223146826 223146954 -27540900 - MIR SINE MIR -79 183 50 385 191 0 0 chr2 223148629 223148692 -27539162 + AluSp SINE Alu 131 193 -110 675 275 43 39 chr2 223148832 223149090 -27538764 + MIR SINE MIR 4 262 0 195 285 65 0 chr2 223149098 223149168 -27538686 - MIR SINE MIR -62 146 81 366 232 127 58 chr2 223149216 223149432 -27538422 - MLT1I LTR MaLR -3 406 100 285 279 147 39 chr2 223150382 223150511 -27537343 + MER5A DNA MER1_type 47 189 0 21 0 0 0 chr2 223150751 223150772 -27537082 + AT_rich Low_complexity Low_complexity 1 21 0 1746 182 10 0 chr2 223150936 223151227 -27536627 - AluJo SINE Alu -18 294 1 368 273 58 8 chr2 223151230 223151351 -27536503 - MIR SINE MIR -70 192 66 1993 171 19 30 chr2 223151957 223152168 -27535686 - MLT1A1 LTR MaLR 0 365 158 2419 87 0 13 chr2 223152168 223152480 -27535374 - AluSc SINE Alu -1 308 1 1993 171 19 30 chr2 223152480 223152637 -27535217 - MLT1A1 LTR MaLR -207 158 1 227 191 64 64 chr2 223152787 223152881 -27534973 + MIR SINE MIR 44 137 -71 730 309 48 0 chr2 223153156 223153405 -27534449 + MIR SINE MIR 2 262 0 1035 174 6 6 chr2 223153953 223154131 -27533723 - AluJo SINE Alu -101 211 34 406 210 30 66 chr2 223154145 223154312 -27533542 - L1MC4a LINE L1 -1852 5956 5796 714 55 0 0 chr2 223154339 223154396 -27533458 + (TTTCC)n Simple_repeat Simple_repeat 1 148 0 714 55 0 0 chr2 223154396 223154487 -27533367 + (TTTCC)n Simple_repeat Simple_repeat 2 92 0 1400 161 3 69 chr2 223154526 223154817 -27533037 - AluJb SINE Alu -40 272 1 366 176 1 78 chr2 223154822 223154900 -27532954 - L1P5 LINE L1 -357 5799 5730 1901 141 104 62 chr2 223154900 223155334 -27532520 - LTR47A LTR ERVL 0 452 1 366 176 1 78 chr2 223155334 223155372 -27532482 - L1P5 LINE L1 -426 5730 5691 702 254 58 55 chr2 223155417 223155485 -27532369 - L1MC4a LINE L1 -2070 5738 5672 1593 213 37 40 chr2 223155485 223155860 -27531994 + MLT1A2 LTR MaLR 1 374 0 702 254 58 55 chr2 223155860 223156082 -27531772 - L1MC4a LINE L1 -2136 5672 5447 704 259 81 4 chr2 223156098 223156345 -27531509 + MER113 DNA MER1_type? 117 382 -139 1854 166 96 55 chr2 223156478 223156893 -27530961 + LTR45B LTR ERV1 1 439 -50 1588 150 48 24 chr2 223156893 223157186 -27530668 - AluJo SINE Alu -12 300 1 1854 166 96 55 chr2 223157186 223157240 -27530614 + LTR45B LTR ERV1 439 489 0 948 190 30 0 chr2 223157469 223157669 -27530185 - L1MC2 LINE L1 -1 6343 6138 2782 140 146 145 chr2 223157670 223158037 -27529817 - L1MC3 LINE L1 -210 7575 7210 298 296 0 11 chr2 223158037 223158125 -27529729 - MLT1F1 LTR MaLR -436 131 45 2782 140 146 145 chr2 223158125 223158347 -27529507 - L1MC3 LINE L1 -575 7210 6990 2310 71 0 0 chr2 223158347 223158641 -27529213 - AluY SINE Alu -17 294 1 1493 143 12 107 chr2 223158643 223158823 -27529031 - AluJo SINE Alu -4 298 161 1836 169 0 6 chr2 223158823 223159137 -27528717 + AluJb SINE Alu 1 312 0 1493 143 12 107 chr2 223159137 223159284 -27528570 - AluJo SINE Alu -141 161 2 2782 140 146 145 chr2 223159284 223159493 -27528361 - L1MC3 LINE L1 -795 6990 6685 198 0 0 0 chr2 223159957 223159979 -27527875 + (T)n Simple_repeat Simple_repeat 1 22 0 393 250 0 86 chr2 223160115 223160243 -27527611 - MIR3 SINE MIR -38 170 54 453 307 65 46 chr2 223160402 223160643 -27527211 + MIR SINE MIR 1 243 -19 1182 217 28 57 chr2 223161445 223161763 -27526091 - MER58B DNA MER1_type 0 341 33 411 233 96 96 chr2 223161797 223162037 -27525817 + MIR SINE MIR 23 262 0 544 213 79 74 chr2 223162414 223162616 -27525238 - MIR SINE MIR -23 239 37 327 293 66 0 chr2 223163181 223163287 -27524567 + MIR3 SINE MIR 82 194 -14 943 190 40 101 chr2 223163553 223163800 -27524054 + MIR SINE MIR 31 262 0 322 241 35 11 chr2 223164736 223164910 -27522944 + (CA)n Simple_repeat Simple_repeat 1 178 0 307 192 16 50 chr2 223164893 223165075 -27522779 + (CATA)n Simple_repeat Simple_repeat 4 179 0 * 2227 112 0 0 chr2 223165179 223165491 -27522363 - AluSx SINE Alu 0 312 1 210 315 45 0 chr2 223165530 223165619 -27522235 + L2 LINE L2 2967 3059 -213 2662 116 5 10 chr2 223166502 223166891 -27520963 - MLT1B LTR MaLR -3 387 1 324 257 159 0 chr2 223166964 223167077 -27520777 + MIR SINE MIR 124 254 -8 216 97 0 0 chr2 223167097 223167128 -27520726 + (ATG)n Simple_repeat Simple_repeat 3 33 0 496 268 109 60 chr2 223167826 223168173 -27519681 + L2 LINE L2 2874 3237 -35 460 316 90 7 chr2 223168803 223168958 -27518896 - MIR3 SINE MIR -19 189 22 606 336 62 0 chr2 223169057 223169265 -27518589 - MIR SINE MIR -25 237 17 2123 109 3 0 chr2 223169338 223169632 -27518222 + AluSx SINE Alu 1 295 -17 535 245 64 0 chr2 223170042 223170189 -27517665 - MIR SINE MIR -63 145 28 284 349 83 5 chr2 223170347 223170539 -27517315 + MLT1L LTR MaLR 193 399 -216 333 296 35 14 chr2 223170709 223170851 -27517003 - MLT1L LTR MaLR -333 282 138 881 185 75 88 chr2 223170882 223171000 -27516854 - MIR SINE MIR -26 236 118 1769 155 0 30 chr2 223171000 223171100 -27516754 - AluSx SINE Alu -17 295 194 2122 85 3 44 chr2 223171100 223171419 -27516435 - AluY SINE Alu -5 306 1 1769 155 0 30 chr2 223171419 223171622 -27516232 - AluSx SINE Alu -118 194 1 1602 135 15 38 chr2 223171632 223171899 -27515955 - AluJb SINE Alu -24 288 28 881 185 75 88 chr2 223171899 223171996 -27515858 - MIR SINE MIR -153 109 13 207 382 138 9 chr2 223172594 223173159 -27514695 - L2 LINE L2 -715 2599 1962 315 309 101 7 chr2 223173222 223173371 -27514483 + L1ME4a LINE L1 5501 5663 -458 607 326 33 0 chr2 223173419 223173634 -27514220 - MIR SINE MIR -39 223 2 499 294 84 5 chr2 223173640 223173854 -27514000 + L1ME4a LINE L1 5656 5886 -235 255 31 0 0 chr2 223174769 223174801 -27513053 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 216 371 18 66 chr2 223174828 223174995 -27512859 - L2 LINE L2 -45 3227 3069 22 0 0 0 chr2 223175226 223175248 -27512606 + AT_rich Low_complexity Low_complexity 1 22 0 207 146 0 0 chr2 223175946 223175980 -27511874 - MIR SINE MIR -65 146 106 451 249 110 0 chr2 223178009 223178166 -27509688 - MIR SINE MIR -49 213 42 1057 87 7 7 chr2 223178827 223178976 -27508878 + AluJb SINE Alu 1 149 -163 380 307 44 0 chr2 223178986 223179100 -27508754 + L2 LINE L2 3192 3310 -3 739 202 0 8 chr2 223179203 223179358 -27508496 + AluSc SINE Alu 154 307 0 2253 92 3 3 chr2 223179825 223180128 -27507726 + AluSq SINE Alu 1 303 -10 203 296 61 31 chr2 223180534 223180632 -27507222 + MIR SINE MIR 20 120 -142 828 294 198 5 chr2 223180756 223181150 -27506704 + L2 LINE L2 2838 3307 -6 200 369 107 0 chr2 223181228 223181331 -27506523 - MER91A DNA MER1_type -82 114 1 255 257 264 7 chr2 223181895 223182039 -27505815 + MIR3 SINE MIR 1 181 -27 793 242 116 27 chr2 223182550 223183030 -27504824 + MLT1G1 LTR MaLR 1 591 -4 289 179 0 26 chr2 223183518 223183596 -27504258 + L1ME4a LINE L1 6046 6121 0 * 350 284 135 14 chr2 223183586 223183801 -27504053 - L1ME4a LINE L1 -73 6048 5808 241 313 0 0 chr2 223183902 223183966 -27503888 + (TATG)n Simple_repeat Simple_repeat 4 67 0 544 269 94 12 chr2 223184369 223184540 -27503314 - MIR SINE MIR -49 213 29 317 357 29 7 chr2 223185994 223186134 -27501720 + MIR3 SINE MIR 66 208 0 438 266 18 16 chr2 223186148 223186326 -27501528 + MIR SINE MIR 13 262 0 337 380 58 18 chr2 223186462 223186686 -27501168 - MIR SINE MIR -6 256 24 695 89 0 67 chr2 223187304 223187529 -27500325 + (TCCCC)n Simple_repeat Simple_repeat 1 210 0 759 173 0 15 chr2 223188324 223188457 -27499397 - FLAM_C SINE Alu 0 133 3 2106 86 4 0 chr2 223188602 223188911 -27498943 - AluY SINE Alu 0 310 1 339 360 72 0 chr2 223188911 223189064 -27498790 - L2 LINE L2 -10 3303 3140 2390 69 0 0 chr2 223189130 223189433 -27498421 + AluY SINE Alu 2 304 -7 1994 112 33 7 chr2 223189444 223189747 -27498107 + AluSp SINE Alu 1 311 -2 241 262 116 47 chr2 223189801 223189973 -27497881 + MLT1K LTR MaLR 342 525 -63 320 317 142 0 chr2 223191434 223191554 -27496300 - L2 LINE L2 0 3272 3136 518 241 59 53 chr2 223191798 223191985 -27495869 - MER5A DNA MER1_type -1 188 1 1659 101 8 17 chr2 223192295 223192532 -27495322 - LTR10A LTR ERV1 -54 555 321 1287 54 32 32 chr2 223192534 223192753 -27495101 - AluY SINE Alu 0 311 111 1066 181 135 32 chr2 223192753 223193034 -27494820 - LTR10A LTR ERV1 -299 310 1 767 285 31 35 chr2 223193043 223193303 -27494551 + MIR SINE MIR 2 260 -2 2164 262 98 55 chr2 223193304 223193910 -27493944 + L1MEd LINE L1 107 781 -5338 2306 42 0 17 chr2 223193910 223194233 -27493621 + AluY SINE Alu 1 318 0 2164 262 98 55 chr2 223194233 223194702 -27493152 + L1MEd LINE L1 781 1229 -4890 1778 159 7 0 chr2 223194702 223194998 -27492856 + AluJo SINE Alu 1 298 -14 342 244 134 31 chr2 223196058 223196185 -27491669 - L2 LINE L2 -2 3311 3172 571 357 85 31 chr2 223196334 223196757 -27491097 - L2 LINE L2 -451 2863 2418 3315 175 56 119 chr2 223196823 223197638 -27490216 + MER45B DNA AcHobo 2 750 -831 1599 154 14 24 chr2 223197638 223197930 -27489924 - AluJo SINE Alu -1 311 23 3315 175 56 119 chr2 223197930 223198074 -27489780 + MER45B DNA AcHobo 750 901 -139 1707 170 3 0 chr2 223198074 223198388 -27489466 + AluSx SINE Alu 1 315 0 3405 142 58 84 chr2 223198399 223199224 -27488630 + L1MC2 LINE L1 5541 6344 0 340 229 76 92 chr2 223199617 223199748 -27488106 + MIR3 SINE MIR 42 170 -38 466 301 102 32 chr2 223199883 223200069 -27487785 - MIR3 SINE MIR -7 201 3 316 268 170 0 chr2 223200734 223200892 -27486962 - MIR SINE MIR -43 219 37 2183 85 20 0 chr2 223201086 223201379 -27486475 + AluSp SINE Alu 1 299 -14 635 276 76 36 chr2 223201647 223201897 -27485957 + MIR SINE MIR 3 262 0 242 304 50 81 chr2 223202252 223202413 -27485441 - MIR3 SINE MIR -1 207 52 463 318 24 24 chr2 223202642 223202812 -27485042 - MIR3 SINE MIR 0 208 39 439 245 41 54 chr2 223202856 223203003 -27484851 + L2 LINE L2 2216 2360 -954 387 0 0 0 chr2 223203286 223203329 -27484525 + (CA)n Simple_repeat Simple_repeat 1 43 0 2309 78 0 0 chr2 223203474 223203769 -27484085 - AluSg SINE Alu -15 295 1 663 221 26 63 chr2 223204561 223204637 -27483217 - AluJb SINE Alu 0 358 281 1167 77 6 22 chr2 223204637 223204820 -27483034 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 663 221 26 63 chr2 223204820 223204979 -27482875 - AluJb SINE Alu -77 281 130 417 193 61 10 chr2 223205376 223205494 -27482360 - MLT1H LTR MaLR -9 581 450 696 245 14 53 chr2 223205545 223205753 -27482101 - MLT1H LTR MaLR -258 291 92 233 254 0 17 chr2 223205886 223205945 -27481909 - MIR3 SINE MIR -141 67 10 1001 156 36 84 chr2 223206582 223206807 -27481047 + MER20 DNA MER1_type 2 215 -4 1860 175 0 0 chr2 223206897 223207183 -27480671 + AluJb SINE Alu 1 286 -26 297 346 30 64 chr2 223207677 223207820 -27480034 - MIR SINE MIR -57 151 21 523 189 16 8 chr2 223207883 223208010 -27479844 + CT-rich Low_complexity Low_complexity 1 128 0 200 188 0 0 chr2 223208575 223208607 -27479247 + (TCCA)n Simple_repeat Simple_repeat 4 35 0 631 309 146 0 chr2 223208699 223208919 -27478935 + MIR SINE MIR 10 261 -1 24 0 0 0 chr2 223209089 223209113 -27478741 + AT_rich Low_complexity Low_complexity 1 24 0 180 274 32 16 chr2 223209207 223209269 -27478585 - MIR SINE MIR -48 214 152 980 74 8 0 chr2 223209395 223209516 -27478338 - AluY SINE Alu -189 122 1 2410 54 10 3 chr2 223209525 223209822 -27478032 - AluY SINE Alu -12 299 1 1512 44 122 0 chr2 223210783 223210988 -27476866 + MER30 DNA MER1_type 1 230 0 241 280 121 30 chr2 223212679 223212811 -27475043 + MIR SINE MIR 76 219 -43 2795 85 31 0 chr2 223213774 223214127 -27473727 - THE1B LTR MaLR 0 364 1 181 194 0 0 chr2 223214150 223214181 -27473673 - L2 LINE L2 -15 3257 3227 2247 84 0 29 chr2 223214721 223215059 -27472795 - AluY SINE Alu 0 311 1 690 153 0 0 chr2 223215060 223215171 -27472683 - AluJb SINE Alu -12 300 190 2477 75 3 7 chr2 223215841 223216146 -27471708 - AluSg SINE Alu -6 304 1 362 300 27 36 chr2 223216438 223216658 -27471196 - L1ME3 LINE L1 -278 5884 5667 295 311 115 16 chr2 223217381 223217503 -27470351 + MER5A DNA MER1_type 56 189 0 252 280 40 64 chr2 223217508 223217633 -27470221 - MIR3 SINE MIR -53 155 34 1996 148 0 24 chr2 223219003 223219301 -27468553 - AluSx SINE Alu -21 291 1 2516 69 0 7 chr2 223219410 223219715 -27468139 - AluSp SINE Alu -10 303 1 197 294 109 59 chr2 223219735 223219854 -27468000 - MIR SINE MIR -64 144 20 289 228 0 0 chr2 223220908 223220965 -27466889 - MLT1D LTR MaLR -82 423 367 1078 158 20 20 chr2 223220965 223221167 -27466687 - MLT1B LTR MaLR 0 390 189 1069 74 0 0 chr2 223221198 223221333 -27466521 - AluSg/x SINE Alu -1 309 175 990 147 0 23 chr2 223221340 223221517 -27466337 - MLT1B LTR MaLR -217 173 1 786 240 58 47 chr2 223221527 223221855 -27465999 - MLT1D LTR MaLR -122 345 3 181 288 25 25 chr2 223221855 223221935 -27465919 - MIR SINE MIR -136 126 47 213 94 0 0 chr2 223222384 223222416 -27465438 + (TG)n Simple_repeat Simple_repeat 2 33 0 499 264 0 0 chr2 223222506 223222616 -27465238 - MER81 DNA DNA 0 114 5 1833 147 35 7 chr2 223222769 223223055 -27464799 + AluSx SINE Alu 1 294 -18 300 326 97 0 chr2 223223075 223223219 -27464635 - MLT1J LTR MaLR -18 493 336 392 229 29 0 chr2 223223287 223223392 -27464462 + LTR33A LTR ERVL 416 523 0 1767 140 57 101 chr2 223223882 223224044 -27463810 + MLT1B LTR MaLR 2 170 -220 1515 149 0 0 chr2 223224044 223224259 -27463595 + AluSc SINE Alu 87 301 -8 1767 140 57 101 chr2 223224259 223224503 -27463351 + MLT1B LTR MaLR 170 390 0 37 86 0 0 chr2 223224589 223224682 -27463172 + AT_rich Low_complexity Low_complexity 1 93 0 734 224 156 58 chr2 223224979 223225061 -27462793 - MER113 DNA MER1_type? -6 515 442 1830 161 7 0 chr2 223225061 223225367 -27462487 + AluJo SINE Alu 1 308 0 734 224 156 58 chr2 223225367 223225534 -27462320 - MER113 DNA MER1_type? -79 442 293 1516 171 65 38 chr2 223225534 223225768 -27462086 - AluSx SINE Alu -12 300 55 2348 115 3 0 chr2 223225768 223226073 -27461781 - AluSp SINE Alu -5 308 3 1516 171 65 38 chr2 223226073 223226130 -27461724 - AluSx SINE Alu -257 55 1 734 224 156 58 chr2 223226130 223226347 -27461507 - MER113 DNA MER1_type? -228 293 1 463 209 105 13 chr2 223226349 223226502 -27461352 - MIR SINE MIR -7 255 96 741 313 92 49 chr2 223226698 223227251 -27460603 + MER45C DNA AcHobo 54 630 -323 227 175 0 0 chr2 223227262 223227302 -27460552 + MER45C DNA AcHobo 914 953 0 210 214 0 0 chr2 223227523 223227565 -27460289 + MIR SINE MIR 112 153 -55 256 317 70 49 chr2 223228604 223228746 -27459108 + MIR SINE MIR 32 176 -86 253 311 92 25 chr2 223229031 223229150 -27458704 - L2 LINE L2 -2 3270 3144 2111 128 0 0 chr2 223230001 223230318 -27457536 + AluSx SINE Alu 1 317 0 237 333 31 31 chr2 223231387 223231483 -27456371 + L2 LINE L2 3150 3245 -27 255 31 0 0 chr2 223231492 223231524 -27456330 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 529 235 34 0 chr2 223231676 223231795 -27456059 + MER58B DNA MER1_type 218 340 -1 556 251 86 101 chr2 223232284 223232394 -27455460 + MLT1H1 LTR MaLR 61 171 -384 2222 103 28 0 chr2 223232394 223232685 -27455169 + AluSx SINE Alu 3 301 -11 556 251 86 101 chr2 223232685 223233077 -27454777 + MLT1H1 LTR MaLR 171 555 0 2211 70 59 11 chr2 223233280 223233566 -27454288 - AluY SINE Alu -11 300 1 571 244 169 0 chr2 223233580 223233752 -27454102 - MIR SINE MIR -14 248 48 697 207 19 101 chr2 223233831 223234008 -27453846 - MIR SINE MIR -2 260 101 2362 111 0 0 chr2 223234008 223234315 -27453539 + AluSx SINE Alu 1 307 -5 697 207 19 101 chr2 223234315 223234345 -27453509 - MIR SINE MIR -161 101 70 523 265 83 63 chr2 223234346 223234648 -27453206 - MLT1I LTR MaLR 0 409 102 269 296 0 0 chr2 223234736 223234790 -27453064 - MIR SINE MIR -195 67 14 262 292 21 111 chr2 223234834 223234978 -27452876 - MIR3 SINE MIR -43 165 35 235 301 54 0 chr2 223234999 223235092 -27452762 + MIR SINE MIR 63 160 -102 1674 163 13 36 chr2 223235654 223235960 -27451894 - AluJo SINE Alu -13 299 1 2141 116 3 7 chr2 223235972 223236274 -27451580 - AluSq SINE Alu -12 301 1 788 240 17 22 chr2 223236276 223236455 -27451399 - MIR SINE MIR -73 189 12 929 196 6 0 chr2 223237030 223237188 -27450666 + FAM SINE Alu 10 168 -17 611 291 0 5 chr2 223237225 223237414 -27450440 - L1ME LINE L1 -525 5645 5458 5596 126 57 3 chr2 223237498 223238925 -27448929 - L1PA16 LINE L1 -9 6157 4654 1226 163 0 0 chr2 223238925 223239115 -27448739 + AluSg/x SINE Alu 115 304 -6 518 223 117 59 chr2 223239120 223239246 -27448608 + L1ME3A LINE L1 5905 6022 -148 1838 170 0 35 chr2 223239246 223239564 -27448290 - AluJb SINE Alu -5 307 1 518 223 117 59 chr2 223239564 223239675 -27448179 + L1ME3A LINE L1 6022 6170 0 1027 256 31 17 chr2 223239683 223240034 -27447820 - MER113 DNA MER1_type? -134 387 32 350 241 60 0 chr2 223240259 223240342 -27447512 - L2 LINE L2 -4 3309 3222 196 368 0 0 chr2 223240341 223240409 -27447445 + MIR SINE MIR 58 125 -83 * 335 172 17 0 chr2 223240904 223240962 -27446892 - L2 LINE L2 -1 3312 3254 1333 184 31 43 chr2 223240965 223241292 -27446562 + MER33 DNA MER1_type 2 324 0 387 0 0 0 chr2 223241747 223241790 -27446064 + (TC)n Simple_repeat Simple_repeat 2 44 0 279 0 0 0 chr2 223241789 223241820 -27446034 + (TG)n Simple_repeat Simple_repeat 2 32 0 * 2194 95 0 34 chr2 223241820 223242115 -27445739 - AluSx SINE Alu -27 285 1 21 0 0 0 chr2 223242296 223242317 -27445537 + AT_rich Low_complexity Low_complexity 1 21 0 181 242 110 55 chr2 223243155 223243246 -27444608 + L2 LINE L2 3194 3289 -24 222 118 0 0 chr2 223243622 223243656 -27444198 + (CCCG)n Simple_repeat Simple_repeat 3 36 0 294 143 0 0 chr2 223243704 223243753 -27444101 + (CTG)n Simple_repeat Simple_repeat 1 49 0 25 0 0 0 chr2 223243762 223243787 -27444067 + GC_rich Low_complexity Low_complexity 1 25 0 187 328 67 25 chr2 223245429 223245548 -27442306 + L2 LINE L2 1330 1453 -1861 342 115 0 0 chr2 223247051 223247103 -27440751 + (CGGG)n Simple_repeat Simple_repeat 2 53 0 2125 128 0 13 chr2 223248057 223248362 -27439492 + AluSg SINE Alu 1 301 -9 2316 118 0 0 chr2 223248373 223248686 -27439168 + AluSq SINE Alu 1 313 0 2464 60 0 7 chr2 223248853 223249151 -27438703 - AluY SINE Alu -15 296 1 2077 107 0 70 chr2 223249158 223249486 -27438368 - AluSx SINE Alu -7 305 1 2220 132 0 0 chr2 223249783 223250093 -27437761 - AluSx SINE Alu -2 310 1 206 303 145 48 chr2 223251122 223251350 -27436504 + MIR SINE MIR 7 256 -6 232 304 87 33 chr2 223251449 223251541 -27436313 + MIR SINE MIR 51 147 -115 246 301 55 26 chr2 223251833 223251964 -27435890 + MIR SINE MIR 50 185 -23 418 331 29 3 chr2 223252469 223252776 -27435078 + LTR16C LTR ERVL 177 457 0 187 295 90 16 chr2 223253131 223253253 -27434601 + L2 LINE L2 1822 1952 -1362 2431 104 0 0 chr2 223253850 223254157 -27433697 + AluSg SINE Alu 2 308 -2 2150 141 0 7 chr2 223254424 223254730 -27433124 - AluSx SINE Alu -8 304 1 325 317 10 30 chr2 223254762 223254863 -27432991 - MIR SINE MIR -90 118 20 496 289 28 7 chr2 223254954 223255096 -27432758 + MIR SINE MIR 61 205 -57 603 239 65 43 chr2 223255138 223255322 -27432532 + MIR SINE MIR 46 233 -29 351 281 82 0 chr2 223255537 223255672 -27432182 + L2 LINE L2 3160 3305 -8 906 276 50 4 chr2 223255778 223256017 -27431837 - MIR SINE MIR -10 252 3 253 263 197 0 chr2 223256050 223256126 -27431728 + MIR SINE MIR 169 259 -3 360 260 160 33 chr2 223256319 223256469 -27431385 + L2 LINE L2 3137 3305 -8 257 254 185 15 chr2 223256584 223256714 -27431140 - L1ME4a LINE L1 -4 6117 5966 226 273 52 0 chr2 223256781 223256858 -27430996 - L1MB7 LINE L1 0 6184 6104 1544 142 73 15 chr2 223256860 223257121 -27430733 - AluJo SINE Alu -10 302 27 1946 140 4 0 chr2 223257121 223257438 -27430416 + AluSg SINE Alu 1 318 0 305 270 0 14 chr2 223257486 223257560 -27430294 - L1MB7 LINE L1 -81 6103 6031 218 291 136 19 chr2 223257649 223257752 -27430102 + MIR3 SINE MIR 1 115 -93 839 294 115 2 chr2 223257993 223258362 -27429492 + L2 LINE L2 2644 3058 -255 1741 201 48 26 chr2 223258471 223258493 -27429361 + MER39 LTR ERV1 130 150 -557 2104 126 3 3 chr2 223258493 223258787 -27429067 - AluSg SINE Alu -16 294 1 1741 201 48 26 chr2 223258787 223259213 -27428641 + MER39 LTR ERV1 150 707 0 2076 125 3 26 chr2 223259405 223259709 -27428145 + AluSq SINE Alu 1 297 -16 1244 218 42 68 chr2 223259740 223260126 -27427728 + MLT1A1 LTR MaLR 1 365 0 455 130 273 106 chr2 223260388 223260479 -27427375 + MER5A DNA MER1_type 1 75 -114 261 57 0 0 chr2 223260479 223260514 -27427340 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2134 121 4 0 chr2 223260516 223260796 -27427058 - AluSx SINE Alu -31 281 1 455 130 273 106 chr2 223260796 223260862 -27426992 + MER5A DNA MER1_type 75 188 -1 439 257 224 66 chr2 223260868 223261140 -27426714 + MER102b DNA MER1_type 4 318 -23 230 254 153 34 chr2 223261188 223261306 -27426548 - MIR SINE MIR -57 151 20 241 118 39 0 chr2 223262340 223262391 -27425463 + GA-rich Low_complexity Low_complexity 2 54 0 421 163 32 163 chr2 223262478 223262668 -27425186 + MER112 DNA MER1_type 1 165 -95 22 35 0 0 chr2 223262845 223262874 -27424980 + AT_rich Low_complexity Low_complexity 1 29 0 660 216 111 28 chr2 223262884 223263065 -27424789 - MIR SINE MIR -38 224 29 2732 141 59 7 chr2 223263091 223263552 -27424302 - MER31A LTR ERV1 0 485 1 301 134 122 12 chr2 223263705 223263787 -27424067 - MIR3 SINE MIR -2 206 116 264 283 76 22 chr2 223264203 223264295 -27423559 + L2 LINE L2 3176 3272 0 462 273 82 36 chr2 223264603 223264823 -27423031 + LTR33A LTR ERVL 61 290 -233 244 167 138 87 chr2 223264841 223264892 -27422962 - MER53 DNA DNA -8 181 134 2252 99 3 3 chr2 223264892 223265184 -27422670 - AluSx SINE Alu -20 292 1 244 167 138 87 chr2 223265184 223265209 -27422645 - MER53 DNA DNA -55 134 112 430 172 0 0 chr2 223265209 223265296 -27422558 - L1MB4 LINE L1 0 6180 6094 244 167 138 87 chr2 223265296 223265356 -27422498 - MER53 DNA DNA -77 112 37 225 252 48 68 chr2 223265484 223265587 -27422267 + LTR33A LTR ERVL 423 523 0 224 364 34 0 chr2 223266092 223266180 -27421674 - L3 LINE CR1 0 1577 1487 318 235 157 20 chr2 223266452 223266554 -27421300 + MER5C DNA MER1_type 208 323 -1 474 250 52 15 chr2 223266612 223266748 -27421106 + MIR SINE MIR 94 234 -28 2841 121 76 94 chr2 223267197 223267761 -27420093 - MER41A LTR ERV1 0 554 1 2260 120 0 0 chr2 223267816 223268115 -27419739 - AluSx SINE Alu -11 301 3 554 269 46 5 chr2 223268472 223268669 -27419185 + Charlie8 DNA MER1_type 72 276 -2141 2404 96 3 0 chr2 223268812 223269115 -27418739 + AluSq SINE Alu 1 304 -9 255 125 0 0 chr2 223269245 223269285 -27418569 + (T)n Simple_repeat Simple_repeat 1 40 0 463 356 123 31 chr2 223270236 223270919 -27416935 + L2 LINE L2 2526 3272 0 2218 142 0 0 chr2 223271133 223271444 -27416410 - AluSq SINE Alu -2 311 1 382 352 8 8 chr2 223271695 223271820 -27416034 - L2 LINE L2 -14 3258 3134 457 340 46 13 chr2 223271950 223272188 -27415666 - L2 LINE L2 -413 2901 2656 364 275 0 11 chr2 223272267 223272358 -27415496 + L2 LINE L2 3197 3286 -27 2681 71 6 33 chr2 223272673 223272801 -27415053 - THE1A LTR MaLR 0 355 225 2220 67 0 28 chr2 223272801 223273086 -27414768 - AluY SINE Alu -5 306 30 2681 71 6 33 chr2 223273086 223273322 -27414532 - THE1A LTR MaLR -130 225 1 552 281 18 6 chr2 223273325 223273492 -27414362 + MIR SINE MIR 66 234 -28 206 152 0 43 chr2 223273520 223273566 -27414288 + CT-rich Low_complexity Low_complexity 2 45 0 252 143 0 0 chr2 223273568 223273610 -27414244 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2520 76 0 10 chr2 223273673 223273987 -27413867 + AluY SINE Alu 1 311 0 464 313 34 47 chr2 223275091 223275324 -27412530 - MIR SINE MIR -10 252 23 243 140 0 0 chr2 223275578 223275628 -27412226 + (TG)n Simple_repeat Simple_repeat 2 51 0 1458 73 117 0 chr2 223275716 223275922 -27411932 - MER30 DNA MER1_type 0 230 1 212 206 0 88 chr2 223277026 223277094 -27410760 - MIR SINE MIR -110 152 91 2255 119 0 3 chr2 223277279 223277581 -27410273 + AluSx SINE Alu 1 301 -11 1142 143 0 0 chr2 223277581 223277742 -27410112 + AluSg/x SINE Alu 134 294 -18 253 300 9 0 chr2 223277744 223277854 -27410000 - MER113 DNA MER1_type? -410 111 1 422 48 0 16 chr2 223278979 223279041 -27408813 + (TG)n Simple_repeat Simple_repeat 1 61 0 2354 105 7 0 chr2 223279327 223279632 -27408222 + AluSx SINE Alu 1 307 -5 596 153 8 0 chr2 223330809 223330927 -27356927 + L1MA7 LINE L1 6173 6291 0 1442 206 68 6 chr2 223331039 223331360 -27356494 - MER58B DNA MER1_type 0 341 1 1765 122 3 61 chr2 223331461 223331772 -27356082 - AluSx SINE Alu -19 293 1 453 284 43 9 chr2 223331773 223331889 -27355965 - L2 LINE L2 0 3313 3194 330 289 84 0 chr2 223333249 223333332 -27354522 - L2 LINE L2 0 3313 3224 345 293 50 10 chr2 223333372 223333471 -27354383 - MIR SINE MIR -58 150 48 420 277 27 9 chr2 223333632 223333744 -27354110 - MIR SINE MIR -64 144 31 1290 146 9 13 chr2 223334672 223334898 -27352956 - AluJo SINE Alu -1 311 87 298 299 137 70 chr2 223335163 223335507 -27352347 - L2 LINE L2 0 3313 2947 669 227 99 111 chr2 223335507 223336014 -27351840 - MLT1F1 LTR MaLR -27 540 40 273 272 146 44 chr2 223336063 223336221 -27351633 - L2 LINE L2 -373 2941 2768 1668 168 0 3 chr2 223336236 223336522 -27351332 - AluJo SINE Alu -27 285 1 231 350 106 0 chr2 223337077 223337200 -27350654 + L2 LINE L2 3129 3264 -8 216 0 0 0 chr2 223337894 223337918 -27349936 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1425 161 45 28 chr2 223337922 223338208 -27349646 - AluJb SINE Alu -21 291 1 846 260 35 8 chr2 223338266 223338520 -27349334 - MIR SINE MIR 0 262 2 229 289 18 97 chr2 223338847 223338961 -27348893 - L2 LINE L2 -1 3312 3208 1489 204 78 43 chr2 223339266 223339712 -27348142 - MLT1C LTR MaLR 0 467 6 317 282 12 0 chr2 223339721 223339806 -27348048 - MER117 DNA MER1_type -110 87 2 934 273 90 30 chr2 223339959 223340392 -27347462 - LTR33 LTR ERVL 0 521 63 372 252 16 55 chr2 223340486 223340613 -27347241 - MIR3 SINE MIR -3 205 84 22 35 0 0 chr2 223341325 223341354 -27346500 + AT_rich Low_complexity Low_complexity 1 29 0 497 310 23 29 chr2 223342423 223342597 -27345257 - MIR3 SINE MIR -11 197 25 1346 264 67 55 chr2 223342597 223343104 -27344750 - MLT1E LTR MaLR -2 591 79 493 318 38 49 chr2 223343637 223343783 -27344071 + L1M4 LINE L1 4081 4227 -1919 1849 206 43 0 chr2 223343783 223344157 -27343697 - MLT1B LTR MaLR 0 390 1 493 318 38 49 chr2 223344157 223344332 -27343522 + L1M4 LINE L1 4227 4397 -1749 226 216 20 0 chr2 223345031 223345082 -27342772 + (CA)n Simple_repeat Simple_repeat 2 53 0 235 253 0 60 chr2 223345130 223345213 -27342641 - L1MC/D LINE L1 -1897 5911 5834 1016 166 0 11 chr2 223345487 223345668 -27342186 + AluSg/x SINE Alu 132 310 0 1016 188 55 128 chr2 223345708 223346091 -27341763 - MLT1A2 LTR MaLR -19 355 1 1935 152 0 9 chr2 223346129 223346444 -27341410 - AluSx SINE Alu 0 312 1 24 0 0 0 chr2 223346477 223346501 -27341353 + AT_rich Low_complexity Low_complexity 1 24 0 278 0 54 0 chr2 223347621 223347658 -27340196 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 204 295 66 16 chr2 223347660 223347721 -27340133 - MIR3 SINE MIR -135 73 10 209 265 60 12 chr2 223347729 223347812 -27340042 + MIR3 SINE MIR 115 201 -7 426 257 29 0 chr2 223347866 223347971 -27339883 - L2 LINE L2 -1 3312 3205 314 376 67 33 chr2 223349516 223349726 -27338128 - MIR SINE MIR -6 256 40 254 343 49 20 chr2 223350021 223350123 -27337731 + MIR SINE MIR 37 141 -67 531 278 170 9 chr2 223350130 223350353 -27337501 + MIR SINE MIR 4 262 0 237 33 0 0 chr2 223350468 223350498 -27337356 + (TG)n Simple_repeat Simple_repeat 1 30 0 1053 244 30 10 chr2 223351020 223351323 -27336531 - MER33 DNA MER1_type -11 313 5 1885 139 4 0 chr2 223352456 223352768 -27335086 + AluSx SINE Alu 1 313 0 540 229 188 0 chr2 223352970 223353114 -27334740 + MER5A DNA MER1_type 18 188 -1 210 268 54 0 chr2 223353599 223353655 -27334199 - MIR3 SINE MIR -43 165 107 426 318 74 11 chr2 223353920 223354096 -27333758 - MIR SINE MIR -74 188 2 422 297 65 7 chr2 223355777 223355932 -27331922 + LTR33 LTR ERVL 1 164 -357 757 238 66 6 chr2 223359564 223359745 -27328109 - MER20 DNA MER1_type 0 219 28 275 331 89 0 chr2 223359805 223359929 -27327925 - L2 LINE L2 -4 3268 3134 264 312 154 55 chr2 223360175 223360486 -27327368 - L2 LINE L2 -697 2617 2276 2023 127 3 0 chr2 223360546 223360845 -27327009 - AluSx SINE Alu -9 303 4 272 270 48 56 chr2 223361251 223361377 -27326477 + L2 LINE L2 3144 3268 -4 282 314 0 0 chr2 223361645 223361715 -27326139 + MIR3 SINE MIR 103 172 -36 247 300 88 0 chr2 223361747 223361827 -27326027 + L2 LINE L2 3174 3260 -12 211 250 164 29 chr2 223364449 223364553 -27323301 - MIR SINE MIR -66 142 25 2185 144 50 17 chr2 223365763 223366123 -27321731 - MER83B LTR ERV1 -6 372 1 700 197 51 51 chr2 223366152 223366330 -27321524 - MER45A DNA AcHobo 0 178 1 228 364 36 18 chr2 223367185 223367295 -27320559 - MIR3 SINE MIR -88 120 9 257 325 128 35 chr2 223367522 223367898 -27319956 - L2 LINE L2 -841 2473 2063 567 172 8 8 chr2 223369049 223369171 -27318683 + L1MA10 LINE L1 6211 6332 -2 184 275 72 58 chr2 223372522 223372591 -27315263 - MIR SINE MIR -93 115 46 577 254 124 70 chr2 223373259 223373574 -27314280 + MER102b DNA MER1_type 10 341 0 595 324 60 14 chr2 223374417 223374698 -27313156 - LTR16C LTR ERVL -31 460 167 242 294 171 12 chr2 223374831 223375083 -27312771 - L1ME LINE L1 -308 5813 5522 204 344 32 21 chr2 223375109 223375202 -27312652 + L3b LINE CR1 1406 1499 -84 1420 94 5 15 chr2 223376006 223376208 -27311646 + L1PA8 LINE L1 5969 6168 -4 304 286 24 0 chr2 223376716 223376800 -27311054 + L2 LINE L2 3228 3313 0 1285 213 225 26 chr2 223377251 223377754 -27310100 + LTR50 LTR ERVL 193 795 0 323 312 36 22 chr2 223380111 223380249 -27307605 + MIR3 SINE MIR 9 148 -60 182 191 162 44 chr2 223381072 223381089 -27306765 - MIR3 SINE MIR -25 183 169 2106 126 10 3 chr2 223381089 223381399 -27306455 + AluSx SINE Alu 1 312 0 182 191 162 44 chr2 223381399 223381449 -27306405 - MIR3 SINE MIR -39 169 108 878 214 33 6 chr2 223381627 223381809 -27306045 + MER5A DNA MER1_type 1 187 -2 1770 161 10 7 chr2 223383819 223384117 -27303737 - MER50 LTR ERV1 -28 706 408 3046 130 109 93 chr2 223384120 223384527 -27303327 + pTR5 LTR ERV1 743 1142 -1296 192 97 0 0 chr2 223384527 223384558 -27303296 + (CCCCCG)n Simple_repeat Simple_repeat 5 35 0 3046 130 109 93 chr2 223384558 223385458 -27302396 + pTR5 LTR ERV1 1142 2438 0 2476 153 12 8 chr2 223385467 223385867 -27301987 - MER50 LTR ERV1 -332 402 1 216 231 0 58 chr2 223386129 223386181 -27301673 - L3 LINE CR1 -196 1381 1333 324 212 254 34 chr2 223386192 223386310 -27301544 + L2 LINE L2 3164 3307 -6 192 271 136 0 chr2 223386641 223386700 -27301154 - L2 LINE L2 -49 3223 3157 284 282 94 0 chr2 223386714 223386799 -27301055 - MER63 DNA MER1_type 0 1060 968 704 188 78 7 chr2 223386815 223386969 -27300885 - MER63 DNA MER1_type -815 246 82 227 312 130 7 chr2 223388975 223389113 -27298741 - MIR SINE MIR -98 164 10 892 161 92 6 chr2 223389289 223389463 -27298391 + MER53 DNA DNA 1 189 0 357 188 13 117 chr2 223389706 223389860 -27297994 - L1MCa LINE L1 -5188 1238 1101 337 250 125 62 chr2 223390640 223390832 -27297022 + L2 LINE L2 3109 3312 -1 549 318 122 48 chr2 223391888 223392519 -27295335 + L2 LINE L2 2255 2969 -303 2284 184 31 43 chr2 223392519 223393030 -27294824 + MLT1D LTR MaLR 1 505 0 549 318 122 48 chr2 223393030 223393155 -27294699 + L2 LINE L2 2969 3083 -189 727 269 20 46 chr2 223393239 223393436 -27294418 + MIR SINE MIR 2 193 -69 437 287 59 29 chr2 223393438 223393574 -27294280 + MIR SINE MIR 116 255 -7 282 341 24 41 chr2 223393566 223393689 -27294165 + L2 LINE L2 3134 3254 -18 * 294 73 0 0 chr2 223393695 223393736 -27294118 + (TGAA)n Simple_repeat Simple_repeat 2 42 0 968 178 8 85 chr2 223393821 223394057 -27293797 - MER20 DNA MER1_type -1 218 1 302 247 32 11 chr2 223395494 223395587 -27292267 - MIR3 SINE MIR -52 156 62 39 22 0 0 chr2 223395845 223395891 -27291963 + AT_rich Low_complexity Low_complexity 1 46 0 359 281 116 30 chr2 223396073 223396237 -27291617 + L3 LINE CR1 1020 1197 -380 226 274 80 18 chr2 223396330 223396443 -27291411 - L2 LINE L2 -1330 1984 1865 1561 192 56 56 chr2 223397050 223397446 -27290408 - MSTD LTR MaLR 0 396 1 181 225 0 28 chr2 223397451 223397522 -27290332 + T-rich Low_complexity Low_complexity 4 72 0 380 311 159 0 chr2 223397706 223397857 -27289997 + MER5A DNA MER1_type 9 183 -6 1551 194 82 24 chr2 223397969 223398713 -27289141 - L1MCa LINE L1 -3993 2571 1839 1723 137 8 109 chr2 223398713 223399099 -27288755 + MER4A LTR ERV1 1 347 -317 2133 176 65 10 chr2 223399139 223399537 -27288317 - MSTB LTR MaLR -2 424 5 4879 172 33 9 chr2 223399538 223400388 -27287466 - MSTB-int LTR MaLR 0 1651 782 * 6006 191 26 16 chr2 223400379 223401200 -27286654 + MST-int LTR MaLR 506 1344 -307 2192 91 0 19 chr2 223401200 223401509 -27286345 + AluSc SINE Alu 1 303 -6 6006 191 26 16 chr2 223401509 223401821 -27286033 + MST-int LTR MaLR 1344 1651 0 3020 159 12 0 chr2 223401846 223402343 -27285511 - MSTB-int LTR MaLR -1147 504 2 2122 166 62 10 chr2 223402382 223402767 -27285087 - MSTB LTR MaLR -21 405 1 797 218 36 50 chr2 223402774 223403054 -27284800 + MER4C LTR ERV1 275 462 -3 1875 175 63 38 chr2 223403062 223403541 -27284313 - L1MCa LINE L1 -4819 1745 1255 1764 256 67 58 chr2 223403540 223404358 -27283496 - L1MCa LINE L1 -5218 827 1 * 549 220 77 54 chr2 223404488 223404656 -27283198 + MER5B DNA MER1_type 7 178 0 518 257 17 50 chr2 223404845 223405100 -27282754 + MLT1E LTR MaLR 1 234 -390 997 200 20 5 chr2 223405120 223405315 -27282539 + MLT1E LTR MaLR 396 593 0 354 328 67 43 chr2 223405318 223405571 -27282283 + MIR SINE MIR 4 262 0 2375 170 22 0 chr2 223405684 223406095 -27281759 + L1PB4 LINE L1 5730 6149 -7 183 327 35 53 chr2 223406186 223406299 -27281555 - L3b LINE CR1 -126 1457 1347 1465 172 0 84 chr2 223406299 223406619 -27281235 - AluJo SINE Alu -13 299 7 442 343 30 30 chr2 223406740 223406938 -27280916 - MIR SINE MIR -50 212 15 436 261 38 45 chr2 223409440 223409597 -27278257 - MIR3 SINE MIR -5 203 48 241 195 0 0 chr2 223409799 223409840 -27278014 - MER94 DNA DNA -87 47 7 307 273 13 0 chr2 223410043 223410120 -27277734 + MIR3 SINE MIR 107 184 -24 425 217 202 48 chr2 223410724 223410916 -27276938 + MIR SINE MIR 27 241 -21 2344 100 3 0 chr2 223412363 223412663 -27275191 + AluSg SINE Alu 1 301 -9 486 264 4 99 chr2 223413029 223413257 -27274597 + MLT1E LTR MaLR 1 197 -370 468 280 74 26 chr2 223415586 223415685 -27272169 - LTR16C LTR ERVL -8 483 390 2175 135 0 0 chr2 223415685 223415974 -27271880 + AluSx SINE Alu 1 289 -23 468 280 74 26 chr2 223415974 223416238 -27271616 - LTR16C LTR ERVL -101 390 73 2561 60 0 31 chr2 223417939 223418258 -27269596 + AluY SINE Alu 1 309 -2 1017 263 106 16 chr2 223420238 223420626 -27267228 + LTR16A LTR ERVL 15 437 -13 201 191 43 0 chr2 223420838 223420885 -27266969 + L2 LINE L2 2920 2968 -345 265 371 57 8 chr2 223421048 223421172 -27266682 + L2 LINE L2 3180 3309 -4 29 0 0 0 chr2 223421220 223421249 -27266605 + AT_rich Low_complexity Low_complexity 1 29 0 959 220 5 5 chr2 223421317 223421517 -27266337 - MER58A DNA MER1_type -8 216 17 658 275 115 0 chr2 223422038 223422256 -27265598 - MIR SINE MIR -3 259 17 228 111 0 0 chr2 223422371 223422407 -27265447 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 267 150 50 0 chr2 223422408 223422468 -27265386 - L1MB5 LINE L1 0 6174 6112 639 221 7 0 chr2 223422468 223422604 -27265250 + FLAM_C SINE Alu 2 138 -5 2999 170 22 12 chr2 223422604 223423181 -27264673 - L1MB5 LINE L1 -50 6124 5542 1928 190 93 10 chr2 223423189 223423599 -27264255 + MER66A LTR ERV1 27 470 -8 430 172 6 147 chr2 223423607 223423764 -27264090 - L1MB5 LINE L1 -661 5519 5385 635 215 62 0 chr2 223423764 223423939 -27263915 + FRAM SINE Alu 1 180 0 746 240 53 0 chr2 223423945 223424153 -27263701 - L1MB5 LINE L1 -751 5395 5177 1601 174 29 22 chr2 223424153 223424505 -27263349 + LTR45B LTR ERV1 3 393 -96 680 215 26 0 chr2 223424599 223424794 -27263060 - L1MB5 LINE L1 -966 5180 4981 605 148 134 7 chr2 223424865 223425007 -27262847 - MLT1C LTR MaLR -297 170 11 454 268 0 65 chr2 223425353 223425506 -27262348 - L1ME3 LINE L1 -1 6161 6019 479 188 211 8 chr2 223425513 223425641 -27262213 + MER45A DNA AcHobo 2 155 -23 261 245 0 0 chr2 223425680 223425733 -27262121 + L2 LINE L2 3007 3059 -213 324 246 107 16 chr2 223426119 223426241 -27261613 - MIR3 SINE MIR -7 201 69 626 310 21 0 chr2 223426923 223427110 -27260744 - MIR SINE MIR 0 262 72 1742 122 88 25 chr2 223427447 223427800 -27260054 - THE1C LTR MaLR 0 375 1 1569 204 26 95 chr2 223427821 223428222 -27259632 - MLT1C LTR MaLR 0 467 40 207 0 0 0 chr2 223428222 223428245 -27259609 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3010 71 10 0 chr2 223428249 223428656 -27259198 - L1PA10 LINE L1 -16 6152 5742 1569 204 26 95 chr2 223428656 223428745 -27259109 - MLT1C LTR MaLR -430 37 6 295 288 45 18 chr2 223429357 223429468 -27258386 - MLT1K LTR MaLR -64 524 411 376 234 32 0 chr2 223429530 223429624 -27258230 - MLT1K LTR MaLR -338 250 154 858 259 192 14 chr2 223429642 223430012 -27257842 - MLT1J1 LTR MaLR -10 436 1 1892 221 33 56 chr2 223430219 223430734 -27257120 - MLT1H1 LTR MaLR -8 547 45 722 300 24 0 chr2 223431080 223431290 -27256564 - MIR SINE MIR -23 239 25 2005 148 0 24 chr2 223432648 223432946 -27254908 - AluSx SINE Alu -21 291 1 2527 69 0 7 chr2 223433055 223433360 -27254494 - AluSp SINE Alu -10 303 1 503 299 65 19 chr2 223435189 223435403 -27252451 - MIR SINE MIR -19 243 20 313 150 100 62 chr2 223435848 223435928 -27251926 + ORSL DNA AcHobo 1 83 -192 1219 162 11 0 chr2 223435932 223436123 -27251731 - AluJo SINE Alu -12 300 108 2126 114 26 37 chr2 223436123 223436501 -27251353 + THE1C LTR MaLR 1 374 -1 2221 128 13 0 chr2 223436501 223436807 -27251047 + AluSx SINE Alu 1 310 -2 493 163 261 0 chr2 223436809 223436962 -27250892 + ORSL DNA AcHobo 83 275 0 648 200 33 13 chr2 223437367 223437517 -27250337 + MER20 DNA MER1_type 2 154 -65 2162 119 0 7 chr2 223439411 223439736 -27248118 - AluSx SINE Alu 0 323 1 332 250 36 57 chr2 223439767 223439907 -27247947 - MIR SINE MIR -78 184 48 639 292 19 23 chr2 223441115 223441331 -27246523 + MIR SINE MIR 32 246 -16 1936 156 3 7 chr2 223441986 223442288 -27245566 - AluJo SINE Alu -11 301 1 183 224 86 0 chr2 223442605 223442663 -27245191 + MIR SINE MIR 65 127 -135 2474 80 3 0 chr2 223443562 223443863 -27243991 - AluSq SINE Alu -11 302 1 271 143 18 18 chr2 223443863 223443919 -27243935 - MER5B DNA MER1_type -113 65 10 887 270 21 17 chr2 223444194 223444435 -27243419 + MIR SINE MIR 21 262 0 326 267 11 0 chr2 223444572 223444662 -27243192 + MER5A DNA MER1_type 19 109 -80 244 301 41 0 chr2 223446472 223446545 -27241309 - MIR SINE MIR -63 199 124 406 283 27 19 chr2 223446893 223447047 -27240807 - MER5B DNA MER1_type -2 176 38 217 333 75 17 chr2 223447075 223447249 -27240605 + MIR SINE MIR 33 216 -46 212 259 141 0 chr2 223447761 223447846 -27240008 - MER5A DNA MER1_type -29 160 64 * 268 314 23 0 chr2 223447788 223447874 -27239980 + MER5A DNA MER1_type 78 165 -24 594 242 127 6 chr2 223447875 223448032 -27239822 - MER45A DNA AcHobo -1 177 2 235 318 91 23 chr2 223448109 223448285 -27239569 + MIR SINE MIR 1 188 -74 2148 99 34 3 chr2 223448328 223448620 -27239234 + AluSx SINE Alu 1 301 -11 1976 154 13 16 chr2 223448995 223449306 -27238548 - AluJo SINE Alu -2 310 1 1917 126 48 0 chr2 223449549 223449843 -27238011 + AluSx SINE Alu 1 307 0 239 231 0 31 chr2 223450140 223450205 -27237649 + GA-rich Low_complexity Low_complexity 3 65 0 309 305 178 0 chr2 223452652 223452770 -27235084 - MIR SINE MIR -45 217 79 198 118 0 0 chr2 223453187 223453221 -27234633 + (T)n Simple_repeat Simple_repeat 1 34 0 189 74 0 0 chr2 223453423 223453450 -27234404 + (CAA)n Simple_repeat Simple_repeat 2 28 0 213 94 0 0 chr2 223456605 223456637 -27231217 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 219 242 20 40 chr2 223457278 223457377 -27230477 + CT-rich Low_complexity Low_complexity 5 101 0 801 173 0 0 chr2 223457989 223458122 -27229732 - FLAM_A SINE Alu 0 133 1 425 269 211 6 chr2 223458279 223458450 -27229404 - MIR SINE MIR -21 241 36 345 236 94 0 chr2 223458502 223458608 -27229246 + MER5A DNA MER1_type 74 189 0 213 297 134 80 chr2 223463176 223463452 -27224402 + L3b LINE CR1 1110 1400 -183 2621 47 0 0 chr2 223463592 223463892 -27223962 - AluY SINE Alu -11 300 1 479 134 1 53 chr2 223463929 223464274 -27223580 + AluJb SINE Alu 9 296 -16 2138 105 39 0 chr2 223465886 223466171 -27221683 + AluSg SINE Alu 1 296 -14 735 171 194 0 chr2 223466176 223466346 -27221508 - MER3 DNA MER1_type -6 203 1 223 24 0 71 chr2 223466753 223466795 -27221059 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 342 290 50 23 chr2 223467138 223467282 -27220572 + MIR SINE MIR 1 152 -56 1309 166 9 0 chr2 223467306 223467523 -27220331 + AluJo SINE Alu 86 304 -8 1283 110 0 2 chr2 223467547 223467765 -27220089 - AluSc SINE Alu -7 302 37 273 304 26 52 chr2 223467781 223467896 -27219958 + MIR SINE MIR 108 219 -43 194 319 86 18 chr2 223468087 223468250 -27219604 - L3b LINE CR1 -134 1449 1276 407 183 0 119 chr2 223468922 223469048 -27218806 + Charlie5 DNA MER1_type 17 127 -2485 * 1957 122 34 21 chr2 223469046 223469431 -27218423 + Charlie5 DNA MER1_type 2235 2624 0 526 229 49 38 chr2 223470495 223470678 -27217176 + MIR3 SINE MIR 7 191 -17 21 0 0 0 chr2 223470985 223471006 -27216848 + AT_rich Low_complexity Low_complexity 1 21 0 193 132 19 19 chr2 223471755 223471808 -27216046 + G-rich Low_complexity Low_complexity 5 57 0 185 113 32 32 chr2 223472652 223472714 -27215140 + (TA)n Simple_repeat Simple_repeat 1 62 0 384 22 0 0 chr2 223472721 223472766 -27215088 + (TG)n Simple_repeat Simple_repeat 1 45 0 369 0 0 0 chr2 223473247 223473288 -27214566 + (TG)n Simple_repeat Simple_repeat 1 41 0 198 0 0 0 chr2 223475746 223475768 -27212086 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 207 0 0 0 chr2 223476217 223476240 -27211614 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr2 223477123 223477146 -27210708 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 227 31 31 0 chr2 223477145 223477177 -27210677 + (TG)n Simple_repeat Simple_repeat 2 34 0 702 67 0 19 chr2 223478622 223478726 -27209128 - L1PA5 LINE L1 0 6154 6053 245 344 84 0 chr2 223478766 223478897 -27208957 + L3b LINE CR1 1399 1540 -43 22 35 0 0 chr2 223479640 223479669 -27208185 + AT_rich Low_complexity Low_complexity 1 29 0 2226 123 0 0 chr2 223480408 223480709 -27207145 - AluSg SINE Alu -9 301 1 426 274 35 0 chr2 223481495 223481608 -27206246 - MER91B DNA MER1_type -5 185 69 * 451 257 29 73 chr2 223481607 223481743 -27206111 - MER91B DNA MER1_type -60 130 1 346 386 51 0 chr2 223481892 223482089 -27205765 + L2 LINE L2 2852 3058 -214 286 302 12 0 chr2 223482131 223482217 -27205637 + MIR SINE MIR 118 204 -58 188 232 54 18 chr2 223482342 223482398 -27205456 + L2 LINE L2 3251 3308 -5 2032 159 0 3 chr2 223482405 223482707 -27205147 + AluJb SINE Alu 5 305 -7 24 0 0 0 chr2 223483217 223483241 -27204613 + AT_rich Low_complexity Low_complexity 1 24 0 2158 127 3 10 chr2 223484381 223484695 -27203159 + AluSq SINE Alu 1 312 -1 532 244 94 6 chr2 223484811 223484948 -27202906 + MIR SINE MIR 89 243 -19 2412 148 95 16 chr2 223484948 223485381 -27202473 - MLT1C LTR MaLR 0 467 1 532 244 94 6 chr2 223485381 223485403 -27202451 + MIR SINE MIR 243 262 0 2178 103 11 0 chr2 223485425 223485739 -27202115 - AluSq SINE Alu 0 317 1 446 246 33 33 chr2 223485815 223485937 -27201917 + L2 LINE L2 3191 3312 -1 625 304 70 13 chr2 223487612 223487842 -27200012 - MIR SINE MIR -5 257 15 2260 169 27 93 chr2 223488050 223488562 -27199292 + MLT2B2 LTR ERVL 1 476 -39 414 94 0 0 chr2 223488562 223488626 -27199228 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 2260 169 27 93 chr2 223488626 223488664 -27199190 + MLT2B2 LTR ERVL 476 515 0 4614 150 18 8 chr2 223489972 223490823 -27197031 - L1MB7 LINE L1 0 6184 5326 615 124 0 0 chr2 223490823 223490912 -27196942 - AluSg/x SINE Alu -7 305 217 581 165 0 0 chr2 223490912 223491009 -27196845 - MER3 DNA MER1_type -104 105 9 241 163 0 0 chr2 223492128 223492177 -27195677 + (TG)n Simple_repeat Simple_repeat 2 50 0 285 100 0 0 chr2 223492527 223492577 -27195277 + (T)n Simple_repeat Simple_repeat 1 50 0 232 260 114 24 chr2 223492911 223493033 -27194821 + MIR SINE MIR 20 150 -65 231 204 20 0 chr2 223493637 223493686 -27194168 + MLT1K LTR MaLR 529 578 -10 186 270 54 27 chr2 223493855 223493921 -27193933 - L3b LINE CR1 -184 1399 1329 2236 126 0 0 chr2 223493921 223494231 -27193623 - AluSq SINE Alu -3 310 1 409 208 28 0 chr2 223495672 223495778 -27192076 - MER53 DNA DNA -5 184 76 1098 132 0 0 chr2 223495780 223495932 -27191922 - AluSq SINE Alu -12 301 150 347 143 100 0 chr2 223495932 223496002 -27191852 - MER53 DNA DNA -112 77 1 2316 99 7 0 chr2 223496712 223497006 -27190848 + AluSc SINE Alu 1 296 -13 245 108 27 0 chr2 223497655 223497692 -27190162 + MIR SINE MIR 107 144 -118 248 254 0 28 chr2 223498229 223498300 -27189554 + GA-rich Low_complexity Low_complexity 2 70 0 530 286 25 19 chr2 223498867 223499028 -27188826 + MIR SINE MIR 4 165 -97 277 271 112 71 chr2 223499550 223499670 -27188184 - MIR SINE MIR -14 248 118 2377 99 0 3 chr2 223499670 223499972 -27187882 - AluSq SINE Alu -12 301 1 277 271 112 71 chr2 223499972 223500021 -27187833 - MIR SINE MIR -144 118 72 205 330 101 18 chr2 223500390 223500499 -27187355 + L2 LINE L2 3137 3254 -18 409 286 89 28 chr2 223500513 223500726 -27187128 - MIR SINE MIR 0 262 19 1969 200 70 29 chr2 223501186 223501671 -27186183 - MLT1D LTR MaLR 0 505 1 440 311 40 54 chr2 223501800 223501983 -27185871 - MIR SINE MIR -67 141 3 2266 208 69 10 chr2 223501988 223502498 -27185356 + MLT1F LTR MaLR 3 542 0 283 236 140 0 chr2 223503021 223503102 -27184752 - MIR SINE MIR -67 141 51 286 271 106 59 chr2 223503199 223503369 -27184485 - MIR SINE MIR -64 198 21 201 325 129 31 chr2 223504109 223504272 -27183582 - L3b LINE CR1 -125 1458 1280 292 279 57 41 chr2 223504501 223504623 -27183231 + MIR3 SINE MIR 33 156 -52 731 265 226 27 chr2 223504625 223505135 -27182719 - L2 LINE L2 -1 3312 2694 2117 130 3 0 chr2 223505664 223505965 -27181889 + AluSx SINE Alu 5 306 -6 245 333 11 0 chr2 223505990 223506077 -27181777 - MIR SINE MIR -152 110 23 230 318 128 20 chr2 223506189 223506337 -27181517 - L2 LINE L2 -219 3053 2890 363 360 71 14 chr2 223507070 223507281 -27180573 - L3b LINE CR1 -68 1515 1293 826 279 35 13 chr2 223507616 223507842 -27180012 - MIR SINE MIR 0 262 32 2345 104 0 0 chr2 223507867 223508176 -27179678 + AluY SINE Alu 1 309 -2 416 254 127 22 chr2 223508390 223508571 -27179283 + MIR3 SINE MIR 3 202 -6 383 281 119 51 chr2 223508857 223509092 -27178762 - MLT1K LTR MaLR 0 588 338 731 234 36 0 chr2 223509155 223509322 -27178532 - MER45A DNA AcHobo 0 178 6 214 366 39 33 chr2 223509799 223509952 -27177902 + MIR SINE MIR 59 212 -50 2175 113 14 0 chr2 223509995 223510287 -27177567 - AluSx SINE Alu -16 296 1 283 266 35 84 chr2 223511464 223511607 -27176247 - L2 LINE L2 -164 3108 2973 295 208 92 123 chr2 223511641 223511771 -27176083 + L2 LINE L2 3164 3289 -24 320 278 61 61 chr2 223511843 223512055 -27175799 + L2 LINE L2 2843 3054 -218 813 188 68 0 chr2 223512152 223512328 -27175526 + MER53 DNA DNA 2 189 0 597 211 37 96 chr2 223512833 223513037 -27174817 - MIR SINE MIR -63 145 8 330 289 11 11 chr2 223513690 223513780 -27174074 - MIR3 SINE MIR -41 167 78 195 302 57 94 chr2 223514004 223514196 -27173658 + L3 LINE CR1 1390 1574 -3 222 342 76 0 chr2 223514480 223514559 -27173295 - L2 LINE L2 -3 3269 3185 286 257 63 63 chr2 223514604 223514749 -27173105 - MIR SINE MIR -65 143 4 260 244 37 0 chr2 223514796 223514878 -27172976 + L1ME4a LINE L1 5997 6081 -40 269 303 124 60 chr2 223514894 223515128 -27172726 + L2 LINE L2 2266 2514 -800 1872 122 14 0 chr2 223515230 223515508 -27172346 - AluSq SINE Alu -31 282 1 2203 75 4 0 chr2 223515614 223515921 -27171933 + AluY SINE Alu 1 308 0 2359 160 56 40 chr2 223516126 223516625 -27171229 + Charlie1b DNA MER1_type 17 523 0 318 326 27 43 chr2 223516810 223516994 -27170860 + MLT1L LTR MaLR 420 600 -15 266 150 0 33 chr2 223517730 223517790 -27170064 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 560 188 20 13 chr2 223517794 223517943 -27169911 + T-rich Low_complexity Low_complexity 3 152 0 180 111 0 0 chr2 223518201 223518228 -27169626 + (T)n Simple_repeat Simple_repeat 1 27 0 538 268 71 27 chr2 223518959 223519142 -27168712 - L2 LINE L2 -2 3311 3121 314 310 27 32 chr2 223519567 223519754 -27168100 - LTR67 LTR ERVL -14 543 358 356 311 25 25 chr2 223520302 223520424 -27167430 + L2 LINE L2 3192 3313 0 761 262 75 0 chr2 223520500 223520687 -27167167 - MIR SINE MIR -6 256 56 565 276 69 25 chr2 223522365 223522568 -27165286 + MIR SINE MIR 1 212 -50 210 284 0 15 chr2 223522569 223522636 -27165218 + (TAA)n Simple_repeat Simple_repeat 1 66 0 640 218 142 24 chr2 223522671 223522882 -27164972 - MER106A DNA MER1_type 0 236 1 329 254 59 34 chr2 223523449 223523567 -27164287 - MER91C DNA MER1_type 0 140 20 2118 123 0 3 chr2 223523696 223524006 -27163848 - AluSq SINE Alu -4 309 1 192 111 0 0 chr2 223524487 223524514 -27163340 + MIR3 SINE MIR 170 196 -12 320 346 32 27 chr2 223525000 223525185 -27162669 + MIR3 SINE MIR 17 202 -6 590 283 54 0 chr2 223526732 223526916 -27160938 + L1PB1 LINE L1 6 199 -6664 * 15308 190 23 14 chr2 223526913 223532910 -27154944 + L1PB1 LINE L1 652 6866 -1 371 281 105 26 chr2 223532987 223533140 -27154714 + L1ME4a LINE L1 5831 5995 -126 993 268 45 0 chr2 223534244 223534487 -27153367 - MIR SINE MIR -3 259 6 552 240 162 41 chr2 223536269 223536654 -27151200 - MLT1J2 LTR MaLR -19 421 1 336 266 108 22 chr2 223536817 223536956 -27150898 + MIR SINE MIR 79 229 -33 223 355 77 44 chr2 223537011 223537259 -27150595 - L2 LINE L2 -49 3223 2968 1099 215 98 40 chr2 223538004 223538329 -27149525 + MLT1I LTR MaLR 66 409 0 221 273 117 13 chr2 223538973 223539050 -27148804 - L2 LINE L2 -2 3270 3186 2267 103 3 0 chr2 223540191 223540502 -27147352 - AluSx SINE Alu 0 312 1 358 362 7 22 chr2 223541164 223541302 -27146552 + L1MC4a LINE L1 5704 5839 -1969 1630 196 82 28 chr2 223541395 223541817 -27146037 - MER31B LTR ERV1 -22 521 1 356 180 67 0 chr2 223541917 223542006 -27145848 + L1ME4a LINE L1 6022 6116 -5 803 120 0 40 chr2 223542534 223542684 -27145170 + L1MA4 LINE L1 6157 6300 0 1155 167 13 50 chr2 223543014 223543253 -27144601 - AluJo SINE Alu -12 300 71 657 142 0 17 chr2 223543519 223543639 -27144215 - L1MA4 LINE L1 0 6300 6183 264 30 0 0 chr2 223544112 223544145 -27143709 + (TG)n Simple_repeat Simple_repeat 1 33 0 1810 201 31 63 chr2 223545065 223545553 -27142301 - MLT1D LTR MaLR -33 472 1 2930 183 54 2 chr2 223545751 223546364 -27141490 + L1MD1 LINE L1 5598 6242 0 2595 138 9 7 chr2 223548799 223549220 -27138634 + L1MB8 LINE L1 5486 5907 -277 873 129 0 0 chr2 223549239 223549371 -27138483 + AluSg/x SINE Alu 176 307 -5 636 184 45 94 chr2 223549373 223549596 -27138258 + L1MB8 LINE L1 5967 6178 0 285 307 40 35 chr2 223549654 223549856 -27137998 - L2 LINE L2 -218 3054 2852 222 364 56 10 chr2 223550122 223550317 -27137537 + L2 LINE L2 2824 3027 -245 341 258 0 8 chr2 223551876 223552008 -27135846 + (TCCA)n Simple_repeat Simple_repeat 1 131 0 1089 152 0 0 chr2 223552067 223552231 -27135623 - AluJ SINE Alu -12 300 137 438 79 0 0 chr2 223552329 223552392 -27135462 + (TTCC)n Simple_repeat Simple_repeat 4 66 0 1664 148 7 4 chr2 223552396 223552667 -27135187 - AluSx SINE Alu -38 274 3 1024 113 0 0 chr2 223552670 223552811 -27135043 - AluJ SINE Alu -171 141 1 243 246 85 23 chr2 223552924 223553054 -27134800 - L1MC4a LINE L1 -1829 5979 5842 1360 155 79 58 chr2 223553072 223553350 -27134504 + AluJb SINE Alu 1 284 -28 348 24 0 0 chr2 223553350 223553391 -27134463 + (CA)n Simple_repeat Simple_repeat 2 42 0 564 244 133 11 chr2 223553524 223553704 -27134150 - MIR SINE MIR -51 211 10 205 163 47 0 chr2 223554599 223554642 -27133212 - L2 LINE L2 -11 3302 3258 306 290 16 8 chr2 223555775 223555899 -27131955 + L3b LINE CR1 1102 1226 -357 772 193 7 0 chr2 223556259 223556394 -27131460 - FRAM SINE Alu -39 137 2 571 263 30 66 chr2 223556514 223556712 -27131142 - MIR SINE MIR -44 218 28 189 147 0 0 chr2 223557753 223557787 -27130067 + (TC)n Simple_repeat Simple_repeat 2 35 0 358 181 165 31 chr2 223557820 223557947 -27129907 + L1MC4a LINE L1 5789 5932 -1876 22 35 0 0 chr2 223558092 223558121 -27129733 + AT_rich Low_complexity Low_complexity 1 29 0 428 320 38 0 chr2 223558184 223558317 -27129537 + MIR SINE MIR 40 176 -67 1418 270 121 8 chr2 223558841 223559346 -27128508 - MLT1G3 LTR MaLR -25 535 1 518 57 14 0 chr2 223559389 223559459 -27128395 + MER41B LTR ERV1 477 547 -88 222 37 0 0 chr2 223559461 223559488 -27128366 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 348 288 30 61 chr2 223559488 223559620 -27128234 - L2 LINE L2 -13 3259 3132 6488 101 60 7 chr2 223559724 223560737 -27127117 - L1MA3 LINE L1 0 6305 5240 223 226 0 24 chr2 223561968 223562052 -27125802 + C-rich Low_complexity Low_complexity 4 85 0 946 98 5 33 chr2 223562052 223562236 -27125618 + (TCCCC)n Simple_repeat Simple_repeat 1 179 0 1573 159 4 0 chr2 223562258 223562522 -27125332 - AluJo SINE Alu -38 274 10 681 255 27 87 chr2 223563249 223563369 -27124485 + L2 LINE L2 2944 3070 -243 1952 94 0 59 chr2 223563369 223563676 -27124178 - AluSx SINE Alu -2 310 22 681 255 27 87 chr2 223563676 223563853 -27124001 + L2 LINE L2 3070 3223 -90 1942 189 107 5 chr2 223563881 223564300 -27123554 - MLT1C LTR MaLR -5 462 1 1977 123 3 20 chr2 223564962 223565264 -27122590 - AluSx SINE Alu 0 312 16 1129 204 77 63 chr2 223565747 223566125 -27121729 - MLT1C LTR MaLR 0 467 85 2290 88 0 0 chr2 223566125 223566601 -27121253 - AluSx SINE Alu 0 476 1 567 167 10 0 chr2 223567057 223567153 -27120701 - MLT1C LTR MaLR -370 97 1 232 349 105 14 chr2 223567310 223567529 -27120325 - MIR SINE MIR -6 256 20 182 170 0 132 chr2 223567977 223568030 -27119824 + L3 LINE CR1 1386 1431 -146 * 380 303 111 6 chr2 223568001 223568163 -27119691 + MIR SINE MIR 13 191 -71 1554 226 40 0 chr2 223568308 223568635 -27119219 + MER58B DNA MER1_type 2 341 0 1717 170 0 35 chr2 223569648 223569959 -27117895 + AluJo SINE Alu 1 300 -12 1276 193 0 0 chr2 223570041 223570253 -27117601 - MER58A DNA MER1_type -12 212 1 327 164 0 0 chr2 223570931 223570992 -27116862 + A-rich Low_complexity Low_complexity 1 61 0 324 276 24 57 chr2 223571119 223571242 -27116612 - MLT1K LTR MaLR 0 588 470 1939 121 0 3 chr2 223571861 223572191 -27115663 + AluSc SINE Alu 1 329 0 429 150 50 0 chr2 223572322 223572402 -27115452 - L1MC2 LINE L1 0 6344 6261 448 286 0 8 chr2 223572466 223572585 -27115269 - MIR SINE MIR -85 177 60 678 267 105 12 chr2 223573822 223574080 -27113774 - MLT1H LTR MaLR -196 353 72 511 131 131 0 chr2 223574401 223574485 -27113369 - 5S rRNA rRNA -26 95 1 1011 129 43 0 chr2 223575049 223575212 -27112642 + L1MA4 LINE L1 5617 5786 -517 2175 104 0 28 chr2 223575212 223575530 -27112324 + AluY SINE Alu 1 309 -2 368 158 13 0 chr2 223575536 223575612 -27112242 + (TA)n Simple_repeat Simple_repeat 1 77 0 281 59 0 0 chr2 223575612 223575646 -27112208 + MADE1 DNA Mariner 3 36 -44 2788 152 37 6 chr2 223575646 223576159 -27111695 + L1MA4 LINE L1 5768 6296 -4 2135 121 0 3 chr2 223576165 223576478 -27111376 + AluSq SINE Alu 1 312 -1 242 258 152 60 chr2 223577217 223577368 -27110486 - MLT1K LTR MaLR -206 382 218 442 275 8 8 chr2 223577585 223577705 -27110149 + MLT1L LTR MaLR 142 261 -354 582 249 88 51 chr2 223577750 223577961 -27109893 + MLT1L LTR MaLR 342 561 -49 977 171 55 22 chr2 223577961 223578142 -27109712 + MER5A DNA MER1_type 1 187 -2 185 221 118 44 chr2 223578236 223578304 -27109550 - MIR3 SINE MIR -27 181 109 1037 112 0 20 chr2 223578545 223578697 -27109157 + AluSg SINE Alu 1 149 -161 1522 190 125 63 chr2 223578698 223579129 -27108725 + MLT1D LTR MaLR 45 502 -3 614 304 103 12 chr2 223579130 223579383 -27108471 - LTR33 LTR ERVL -225 296 21 270 56 0 0 chr2 223580821 223580857 -27106997 + (TG)n Simple_repeat Simple_repeat 1 36 0 196 238 0 0 chr2 223582345 223582387 -27105467 + MIR3 SINE MIR 164 205 -3 258 250 62 25 chr2 223582828 223582908 -27104946 - MIR SINE MIR -58 150 68 25 31 0 0 chr2 223584763 223584795 -27103059 + GC_rich Low_complexity Low_complexity 1 32 0 210 327 33 8 chr2 223585031 223585168 -27102686 + MIR SINE MIR 23 186 -76 1106 122 0 6 chr2 223585256 223585437 -27102417 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 337 286 84 13 chr2 223585868 223586022 -27101832 + MIR SINE MIR 63 227 -35 2268 84 0 0 chr2 223587073 223587369 -27100485 - AluSc SINE Alu -13 296 1 498 249 40 57 chr2 223587588 223587765 -27100089 - MER5A DNA MER1_type 0 189 16 862 122 0 50 chr2 223588357 223588496 -27099358 - FLAM_C SINE Alu -1 132 1 479 232 54 43 chr2 223588545 223588730 -27099124 - MER5A DNA MER1_type -2 187 1 253 217 261 36 chr2 223589231 223589369 -27098485 + MIR SINE MIR 89 257 -5 231 146 0 0 chr2 223589369 223589410 -27098444 + (CA)n Simple_repeat Simple_repeat 1 41 0 371 326 23 0 chr2 223589445 223589620 -27098234 + (CA)n Simple_repeat Simple_repeat 1 179 0 304 326 6 11 chr2 223589702 223589880 -27097974 + (CA)n Simple_repeat Simple_repeat 2 178 0 473 226 0 63 chr2 223589899 223590089 -27097765 + (CA)n Simple_repeat Simple_repeat 1 178 0 512 234 0 43 chr2 223590107 223590295 -27097559 + (CA)n Simple_repeat Simple_repeat 1 180 0 272 265 111 17 chr2 223590634 223590751 -27097103 - MIR SINE MIR -29 233 106 209 311 9 66 chr2 223591875 223591933 -27095921 - L2 LINE L2 -15 3298 3238 2851 117 20 78 chr2 223591933 223592317 -27095537 + L1MA7 LINE L1 5769 6113 -178 2142 70 7 30 chr2 223592317 223592616 -27095238 - AluY SINE Alu -19 292 1 2851 117 20 78 chr2 223592616 223592786 -27095068 + L1MA7 LINE L1 6113 6291 0 1635 144 0 44 chr2 223592790 223593088 -27094766 + AluJb SINE Alu 1 285 -27 209 311 9 66 chr2 223593088 223593130 -27094724 - L2 LINE L2 -78 3235 3199 1900 85 0 4 chr2 223593359 223593605 -27094249 + AluSg SINE Alu 52 296 -14 1040 196 50 0 chr2 223593740 223593939 -27093915 + MER3 DNA MER1_type 1 209 0 1726 209 103 5 chr2 223594038 223594463 -27093391 - MLT1C LTR MaLR 0 467 1 248 369 54 0 chr2 223594585 223594715 -27093139 - MIR SINE MIR -68 194 58 261 328 16 69 chr2 223594865 223595054 -27092800 + MIR3 SINE MIR 6 184 -24 2360 93 0 0 chr2 223595215 223595528 -27092326 + AluSq SINE Alu 1 313 0 759 158 133 6 chr2 223596385 223596550 -27091304 + MER53 DNA DNA 1 186 -3 474 325 48 18 chr2 223596718 223596946 -27090908 + LTR16C LTR ERVL 168 402 -89 294 213 126 47 chr2 223596996 223597123 -27090731 + LTR16C LTR ERVL 353 489 -2 246 281 56 0 chr2 223597181 223597270 -27090584 - MIR3 SINE MIR -4 204 111 236 205 0 0 chr2 223597355 223597394 -27090460 + L2 LINE L2 3217 3255 -17 567 345 81 0 chr2 223598058 223598267 -27089587 + ERVL LTR ERVL 2722 2947 -2049 354 331 113 39 chr2 223598273 223598654 -27089200 + ERVL LTR ERVL 4969 5377 -387 335 361 52 42 chr2 223599020 223599350 -27088504 + LTR16C LTR ERVL 156 488 -3 271 269 0 15 chr2 223599366 223599433 -27088421 + MIR SINE MIR 60 125 -137 1079 262 25 37 chr2 223599549 223600031 -27087823 - LTR33 LTR ERVL 0 521 5 465 261 35 7 chr2 223601152 223601294 -27086560 + MER103 DNA DNA 13 158 -8 2058 157 28 6 chr2 223601450 223601807 -27086047 + MLT1A1 LTR MaLR 1 365 0 326 225 12 25 chr2 223602429 223602509 -27085345 - MER116 DNA Mariner 0 80 2 261 0 0 0 chr2 223602547 223602576 -27085278 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 450 0 0 0 chr2 223602575 223602625 -27085229 + (GA)n Simple_repeat Simple_repeat 2 51 0 360 244 163 7 chr2 223603222 223603357 -27084497 - MIR SINE MIR -74 188 33 420 242 83 23 chr2 223603506 223603638 -27084216 - Charlie8 DNA MER1_type -2152 265 126 332 192 164 0 chr2 223603641 223603714 -27084140 - L2 LINE L2 -8 3305 3221 621 256 15 0 chr2 223603718 223603851 -27084003 - Charlie8 DNA MER1_type -2280 137 3 1981 138 3 0 chr2 223603872 223604170 -27083684 - AluSx SINE Alu -13 299 1 899 135 0 0 chr2 223604182 223604315 -27083539 - AluSq/x SINE Alu -179 133 1 346 237 68 68 chr2 223604393 223604570 -27083284 + Charlie7 DNA MER1_type 2432 2608 -4 1868 168 0 9 chr2 223604578 223604893 -27082961 + AluJb SINE Alu 1 312 0 416 325 44 6 chr2 223605255 223605415 -27082439 + L3b LINE CR1 1212 1377 -206 208 256 116 96 chr2 223605478 223605677 -27082177 + MIR3 SINE MIR 2 204 -4 1115 317 23 21 chr2 223605755 223606184 -27081670 - MLT1J1 LTR MaLR -16 430 1 267 306 81 50 chr2 223606347 223606507 -27081347 + MIR SINE MIR 22 186 -76 511 286 56 19 chr2 223606746 223606907 -27080947 + MIR3 SINE MIR 41 207 -1 850 302 138 45 chr2 223606959 223607878 -27079976 + L2 LINE L2 2288 3313 0 653 295 55 2 chr2 223608511 223608720 -27079134 - MIR SINE MIR -14 248 25 212 326 42 42 chr2 223609245 223609340 -27078514 - MIR SINE MIR -12 250 156 2014 136 101 25 chr2 223609346 223609714 -27078140 + MER61B LTR ERV1 1 396 -29 254 338 0 38 chr2 223609744 223609824 -27078030 - MIR SINE MIR -116 92 16 677 316 34 0 chr2 223610075 223610281 -27077573 - MIR SINE MIR -48 214 2 277 311 22 0 chr2 223610295 223610385 -27077469 - MIR SINE MIR -60 148 57 471 293 22 2 chr2 223610890 223611056 -27076798 + MER5A DNA MER1_type 4 187 -2 380 311 159 0 chr2 223612019 223612170 -27075684 + MER5A DNA MER1_type 9 183 -6 1551 194 82 24 chr2 223612282 223613026 -27074828 - L1MCa LINE L1 -3993 2571 1839 1729 138 8 107 chr2 223613026 223613411 -27074443 + MER4A LTR ERV1 1 347 -317 2133 176 65 10 chr2 223613451 223613849 -27074005 - MSTB LTR MaLR -2 424 5 4809 174 34 9 chr2 223613850 223614696 -27073158 - MSTB-int LTR MaLR 0 1651 785 * 5796 194 30 17 chr2 223614690 223615508 -27072346 + MST-int LTR MaLR 506 1345 -306 2208 88 0 19 chr2 223615508 223615816 -27072038 + AluSc SINE Alu 1 302 -7 5796 194 30 17 chr2 223615816 223616128 -27071726 + MST-int LTR MaLR 1345 1651 0 2982 159 14 0 chr2 223616153 223616649 -27071205 - MSTB-int LTR MaLR -1147 504 2 2137 164 62 10 chr2 223616688 223617073 -27070781 - MSTB LTR MaLR -21 405 1 797 218 36 50 chr2 223617080 223617360 -27070494 + MER4C LTR ERV1 275 462 -3 1907 203 33 8 chr2 223617368 223617847 -27070007 - L1MCa LINE L1 -4819 1745 1255 1764 256 67 58 chr2 223617846 223618664 -27069190 - L1MCa LINE L1 -5218 827 1 * 549 220 77 54 chr2 223618794 223618962 -27068892 + MER5B DNA MER1_type 7 178 0 518 257 17 50 chr2 223619151 223619406 -27068448 + MLT1E LTR MaLR 1 234 -390 980 205 20 5 chr2 223619426 223619621 -27068233 + MLT1E LTR MaLR 396 593 0 361 323 67 47 chr2 223619624 223619878 -27067976 + MIR SINE MIR 4 262 0 2375 170 22 0 chr2 223619991 223620402 -27067452 + L1PB4 LINE L1 5730 6149 -7 183 327 35 53 chr2 223620494 223620607 -27067247 - L3b LINE CR1 -126 1457 1347 1475 177 3 58 chr2 223620607 223620917 -27066937 - AluJo SINE Alu -13 299 7 442 343 30 30 chr2 223621038 223621236 -27066618 - MIR SINE MIR -50 212 15 436 261 38 45 chr2 223623737 223623894 -27063960 - MIR3 SINE MIR -5 203 48 241 195 0 0 chr2 223624095 223624136 -27063718 - MER94 DNA DNA -87 47 7 307 273 13 0 chr2 223624339 223624416 -27063438 + MIR3 SINE MIR 107 184 -24 425 217 202 48 chr2 223625020 223625212 -27062642 + MIR SINE MIR 27 241 -21 2165 104 3 0 chr2 223626659 223626958 -27060896 + AluSg SINE Alu 1 300 -10 495 203 30 168 chr2 223627324 223627556 -27060298 + MLT1F LTR MaLR 1 200 -342 492 277 74 26 chr2 223629889 223629988 -27057866 - LTR16C LTR ERVL -8 483 390 2021 135 0 0 chr2 223629988 223630277 -27057577 + AluSx SINE Alu 1 289 -23 492 277 74 26 chr2 223630277 223630541 -27057313 - LTR16C LTR ERVL -101 390 73 2417 59 0 31 chr2 223632242 223632563 -27055291 + AluY SINE Alu 1 311 0 1048 260 106 16 chr2 223634552 223634940 -27052914 + LTR16A LTR ERVL 15 437 -13 216 191 43 0 chr2 223635152 223635199 -27052655 + L2 LINE L2 2921 2969 -345 278 363 57 8 chr2 223635362 223635486 -27052368 + L2 LINE L2 3180 3309 -4 29 0 0 0 chr2 223635534 223635563 -27052291 + AT_rich Low_complexity Low_complexity 1 29 0 996 220 5 5 chr2 223635632 223635832 -27052022 - MER58A DNA MER1_type -8 216 17 698 261 121 0 chr2 223636364 223636571 -27051283 - MIR SINE MIR -14 248 17 228 111 0 0 chr2 223636686 223636722 -27051132 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 284 150 50 0 chr2 223636723 223636783 -27051071 - L1MB5 LINE L1 0 6174 6112 671 187 7 36 chr2 223636783 223636922 -27050932 + AluJo SINE Alu 2 136 -176 3162 164 23 12 chr2 223636923 223637496 -27050358 - L1MB5 LINE L1 -54 6120 5542 1987 188 95 10 chr2 223637504 223637913 -27049941 + MER66A LTR ERV1 27 470 -8 460 172 6 147 chr2 223637921 223638078 -27049776 - L1MB5 LINE L1 -661 5519 5385 660 206 64 0 chr2 223638078 223638219 -27049635 + AluJo SINE Alu 133 282 -30 225 65 0 0 chr2 223638222 223638253 -27049601 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 765 227 56 0 chr2 223638259 223638457 -27049397 - L1MB5 LINE L1 -751 5395 5187 1674 166 33 22 chr2 223638467 223638818 -27049036 + LTR45B LTR ERV1 3 393 -96 706 206 31 0 chr2 223638912 223639106 -27048748 - L1MB5 LINE L1 -966 5180 4981 643 148 134 7 chr2 223639177 223639319 -27048535 - MLT1C LTR MaLR -297 170 11 452 268 0 65 chr2 223639665 223639818 -27048036 - L1ME3 LINE L1 -1 6161 6019 506 188 211 8 chr2 223639825 223639953 -27047901 + MER45A DNA AcHobo 2 155 -23 276 245 0 0 chr2 223639992 223640045 -27047809 + L2 LINE L2 3007 3059 -213 334 221 100 36 chr2 223640431 223640571 -27047283 - MIR3 SINE MIR -7 201 53 651 298 22 0 chr2 223641234 223641412 -27046442 - MIR SINE MIR 0 262 81 1851 113 93 31 chr2 223641758 223642111 -27045743 - THE1C LTR MaLR 0 375 1 1663 202 26 95 chr2 223642132 223642533 -27045321 - MLT1C LTR MaLR 0 467 40 207 0 0 0 chr2 223642533 223642556 -27045298 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3178 69 10 0 chr2 223642560 223642967 -27044887 - L1PA10 LINE L1 -16 6152 5742 1663 202 26 95 chr2 223642967 223643056 -27044798 - MLT1C LTR MaLR -430 37 6 293 288 45 18 chr2 223643668 223643779 -27044075 - MLT1K LTR MaLR -64 524 411 375 245 32 0 chr2 223643841 223643935 -27043919 - MLT1K LTR MaLR -338 250 154 886 257 192 14 chr2 223643953 223644323 -27043531 - MLT1J1 LTR MaLR -10 436 1 1978 222 33 55 chr2 223644530 223645044 -27042810 - MLT1H1 LTR MaLR -8 547 45 778 295 24 0 chr2 223645390 223645600 -27042254 - MIR SINE MIR -23 239 25 27 0 0 0 chr2 223646354 223646381 -27041473 + AT_rich Low_complexity Low_complexity 1 27 0 27 0 0 0 chr2 223647012 223647039 -27040815 + AT_rich Low_complexity Low_complexity 1 27 0 278 273 15 53 chr2 223647747 223647879 -27039975 + CT-rich Low_complexity Low_complexity 4 130 0 892 235 31 5 chr2 223648698 223648894 -27038960 + MER3 DNA MER1_type 3 203 -6 1695 132 107 0 chr2 223648973 223649326 -27038528 - AluSx SINE Alu 0 383 1 270 0 0 0 chr2 223649402 223649432 -27038422 + (CAA)n Simple_repeat Simple_repeat 1 30 0 479 264 25 38 chr2 223649432 223649591 -27038263 - MIR SINE MIR -89 173 17 363 329 33 0 chr2 223649620 223649772 -27038082 + MIR3 SINE MIR 45 201 -7 181 330 78 17 chr2 223650582 223650697 -27037157 - L2 LINE L2 -1 3271 3150 226 125 36 36 chr2 223650878 223650934 -27036920 - Charlie8 DNA MER1_type -2259 158 103 1830 171 70 42 chr2 223651514 223651583 -27036271 - MLT2D LTR ERVL 0 414 348 180 0 0 0 chr2 223651583 223651603 -27036251 + (GA)n Simple_repeat Simple_repeat 1 20 0 1830 171 70 42 chr2 223651603 223651936 -27035918 - MLT2D LTR ERVL -66 348 1 432 305 32 11 chr2 223652153 223652340 -27035514 + MER117 DNA MER1_type 3 193 -4 236 346 46 39 chr2 223652341 223652494 -27035360 - MIR3 SINE MIR -45 163 10 1438 195 47 0 chr2 223652670 223652947 -27034907 + AluJo SINE Alu 1 290 -22 415 240 115 38 chr2 223653007 223653190 -27034664 - MER3 DNA MER1_type -2 207 11 2462 114 45 0 chr2 223653523 223653882 -27033972 + THE1C LTR MaLR 1 375 0 618 218 153 57 chr2 223654169 223654347 -27033507 + MIR SINE MIR 7 213 -49 2112 133 56 14 chr2 223654347 223654707 -27033147 - THE1C LTR MaLR 0 375 1 618 218 153 57 chr2 223654707 223654757 -27033097 + MIR SINE MIR 213 257 -5 264 293 0 0 chr2 223654767 223654825 -27033029 + L2 LINE L2 3123 3180 -92 458 168 0 11 chr2 223656053 223656148 -27031706 + CT-rich Low_complexity Low_complexity 2 95 0 214 356 81 27 chr2 223657038 223657187 -27030667 + MIR SINE MIR 2 158 -50 965 228 16 0 chr2 223657196 223657380 -27030474 - MER5A DNA MER1_type -1 188 2 342 67 0 0 chr2 223657808 223657853 -27030001 + (ATTAG)n Simple_repeat Simple_repeat 2 46 0 450 326 26 21 chr2 223658489 223658679 -27029175 + LTR16C LTR ERVL 286 476 -15 1684 92 4 0 chr2 223658752 223658980 -27028874 - AluSp SINE Alu -8 305 77 22 0 0 0 chr2 223659030 223659052 -27028802 + AT_rich Low_complexity Low_complexity 1 22 0 1061 285 145 34 chr2 223659052 223659773 -27028081 - HAL1 LINE L1 -1 2506 1689 2355 86 0 3 chr2 223659773 223660086 -27027768 - AluSx SINE Alu 0 312 1 1061 285 145 34 chr2 223660086 223660151 -27027703 - HAL1 LINE L1 -818 1689 1633 1132 189 65 55 chr2 223660321 223660628 -27027226 - MER33 DNA MER1_type -13 311 2 665 221 0 0 chr2 223660684 223660811 -27027043 + MIR SINE MIR 77 203 -59 193 222 0 0 chr2 223660830 223660866 -27026988 - MIR SINE MIR -31 231 196 839 312 79 24 chr2 223661261 223661893 -27025961 + L1ME3A LINE L1 5291 5957 -213 1782 156 0 13 chr2 223662184 223662486 -27025368 - AluJo SINE Alu 0 312 15 380 285 64 52 chr2 223662545 223662717 -27025137 - HAL1 LINE L1 -1756 751 578 226 270 45 45 chr2 223662844 223662933 -27024921 - MIR SINE MIR -66 196 108 215 263 145 0 chr2 223663041 223663117 -27024737 - L3b LINE CR1 -209 1374 1288 5586 118 22 22 chr2 223664410 223665333 -27022521 - L1PA13 LINE L1 -2 7599 6659 15473 200 11 21 chr2 223665329 223666552 -27021302 - L1PA13 LINE L1 -1382 6202 4968 294 146 83 0 chr2 223666552 223666600 -27021254 + AluSx SINE Alu 1 52 -250 2044 122 0 3 chr2 223666600 223666886 -27020968 + AluSx SINE Alu 28 312 0 15473 200 11 21 chr2 223666886 223669012 -27018842 - L1PA13 LINE L1 -2614 4970 2837 2763 90 3 6 chr2 223669404 223669769 -27018085 - THE1B LTR MaLR 0 364 1 2104 171 82 47 chr2 223671192 223671609 -27016245 - MLT1D LTR MaLR 0 505 67 1869 147 0 17 chr2 223671609 223671908 -27015946 + AluSx SINE Alu 12 305 -7 2104 171 82 47 chr2 223671908 223671976 -27015878 - MLT1D LTR MaLR -438 67 3 332 286 48 8 chr2 223672406 223672532 -27015322 - MIR SINE MIR -26 236 106 202 189 0 0 chr2 223673227 223673264 -27014590 + (CAT)n Simple_repeat Simple_repeat 3 39 0 2236 107 0 13 chr2 223673329 223673627 -27014227 + AluSc SINE Alu 1 294 -15 202 250 147 0 chr2 223673700 223673768 -27014086 + MIR SINE MIR 185 262 0 459 111 222 134 chr2 223673867 223674038 -27013816 + MER53 DNA DNA 1 186 -3 14979 136 26 8 chr2 223675169 223676566 -27011288 + Tigger1 DNA MER2_type 1 1462 -956 2467 129 28 8 chr2 223676566 223676923 -27010931 + THE1B LTR MaLR 1 364 0 14979 136 26 8 chr2 223676923 223677899 -27009955 + Tigger1 DNA MER2_type 1462 2418 0 424 278 160 48 chr2 223678083 223678134 -27009720 + L1ME4a LINE L1 5383 5427 -694 1841 168 3 0 chr2 223678134 223678425 -27009429 + AluJo SINE Alu 1 292 -20 424 278 160 48 chr2 223678425 223678772 -27009082 + L1ME4a LINE L1 5427 5826 -295 751 318 84 26 chr2 223678979 223679322 -27008532 + LTR33 LTR ERVL 8 370 -151 2051 130 10 0 chr2 223679333 223679632 -27008222 - AluSq SINE Alu -11 302 1 22 0 0 0 chr2 223679708 223679730 -27008124 + AT_rich Low_complexity Low_complexity 1 22 0 2366 89 3 7 chr2 223679831 223680135 -27007719 - AluSx SINE Alu -7 305 3 26 0 0 0 chr2 223680213 223680239 -27007615 + AT_rich Low_complexity Low_complexity 1 26 0 275 279 10 0 chr2 223680413 223680517 -27007337 + (TA)n Simple_repeat Simple_repeat 1 105 0 420 186 16 24 chr2 223682603 223682727 -27005127 + CT-rich Low_complexity Low_complexity 4 126 0 767 209 51 56 chr2 223682745 223682979 -27004875 - L1MB8 LINE L1 -1 6177 5945 607 221 166 38 chr2 223683786 223684076 -27003778 - MLT1F LTR MaLR -5 537 211 975 257 124 39 chr2 223684081 223684419 -27003435 - MLT1H1 LTR MaLR -186 369 3 402 296 30 7 chr2 223686999 223687134 -27000720 + MIR3 SINE MIR 21 158 -50 590 260 40 7 chr2 223687448 223687598 -27000256 - Charlie7 DNA MER1_type -2457 155 1 1747 212 54 27 chr2 223688549 223688997 -26998857 - MLT1C LTR MaLR 0 467 8 238 67 44 0 chr2 223689438 223689483 -26998371 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1789 125 44 4 chr2 223689487 223689759 -26998095 - AluSp SINE Alu -30 283 1 6954 66 0 7 chr2 223689773 223690812 -26997042 - L1PA7 LINE L1 0 6154 5116 2182 113 13 3 chr2 223690812 223691113 -26996741 - AluSp SINE Alu -9 304 1 6954 66 0 7 chr2 223691113 223691586 -26996268 - L1PA7 LINE L1 -1038 5116 4641 2131 110 20 3 chr2 223691686 223691986 -26995868 - AluSp SINE Alu -8 305 1 30038 107 9 25 chr2 223691986 223697382 -26990472 - L1P3 LINE L1 -1033 5428 8 345 24 0 0 chr2 223697398 223697440 -26990414 + (TTA)n Simple_repeat Simple_repeat 1 42 0 1625 145 25 75 chr2 223699135 223699453 -26988401 + AluJo SINE Alu 1 302 -10 31 0 0 0 chr2 223699692 223699723 -26988131 + AT_rich Low_complexity Low_complexity 1 31 0 543 167 0 0 chr2 223700925 223701009 -26986845 + FLAM_C SINE Alu 36 119 -24 372 276 72 89 chr2 223702410 223702647 -26985207 + MIR SINE MIR 10 245 -17 462 315 44 10 chr2 223703208 223703411 -26984443 + MIR SINE MIR 34 243 -19 304 308 9 19 chr2 223703493 223703600 -26984254 + CT-rich Low_complexity Low_complexity 5 110 0 186 43 0 0 chr2 223704785 223704808 -26983046 + (CA)n Simple_repeat Simple_repeat 1 23 0 2280 167 44 15 chr2 223705225 223705633 -26982221 + MSTB LTR MaLR 1 420 -6 563 291 108 0 chr2 223706199 223706412 -26981442 - MIR SINE MIR -19 243 8 1239 234 65 14 chr2 223707181 223707535 -26980319 - L1M4 LINE L1 -1216 4930 4559 452 310 26 19 chr2 223707814 223707969 -26979885 - MIR SINE MIR -73 189 34 352 104 30 0 chr2 223708030 223708097 -26979757 + GA-rich Low_complexity Low_complexity 1 69 0 227 368 9 0 chr2 223711358 223711464 -26976390 - MIR3 SINE MIR -6 202 96 449 269 82 12 chr2 223712117 223712288 -26975566 - MER5A DNA MER1_type 0 189 7 983 152 30 35 chr2 223712451 223712649 -26975205 + MIR SINE MIR 9 205 -57 277 331 23 23 chr2 223712693 223712823 -26975031 - MIR3 SINE MIR -46 162 33 506 161 21 0 chr2 223714852 223714945 -26972909 + Charlie5 DNA MER1_type 5 99 -2513 1538 164 63 25 chr2 223714959 223715325 -26972529 + Charlie5 DNA MER1_type 2244 2623 0 290 83 0 0 chr2 223715590 223715626 -26972228 - tRNA-Arg-AGA tRNA tRNA -40 36 1 237 380 43 25 chr2 223715979 223716142 -26971712 + MIR3 SINE MIR 24 189 -19 289 298 26 0 chr2 223716365 223716479 -26971375 - L1ME LINE L1 -492 5629 5513 315 297 54 38 chr2 223716492 223716677 -26971177 - L1ME LINE L1 -2366 5442 5255 7929 18 0 4 chr2 223717744 223718749 -26969105 - L1PA3 LINE L1 0 6155 5153 22 35 0 0 chr2 223718843 223718872 -26968982 + AT_rich Low_complexity Low_complexity 1 29 0 461 342 89 0 chr2 223718949 223719186 -26968668 - L3 LINE CR1 -430 1147 890 266 221 0 12 chr2 223719991 223720077 -26967777 + (TA)n Simple_repeat Simple_repeat 2 86 0 2285 130 31 8 chr2 223721800 223722155 -26965699 - THE1B LTR MaLR -1 363 1 336 342 3 15 chr2 223722447 223722592 -26965262 + MIR SINE MIR 20 164 -64 2369 90 0 0 chr2 223722612 223722900 -26964954 - AluSc SINE Alu -21 288 1 584 345 29 4 chr2 223723763 223724009 -26963845 - MIR SINE MIR 0 262 11 1393 280 48 9 chr2 223724584 223725041 -26962813 - LTR33 LTR ERVL -28 493 19 180 77 0 0 chr2 223725298 223725324 -26962530 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2663 53 0 0 chr2 223725325 223725647 -26962207 - L1PA5 LINE L1 -13 6141 5820 407 242 11 0 chr2 223725921 223726012 -26961842 + MER5A DNA MER1_type 14 105 -84 2027 123 0 43 chr2 223726141 223726466 -26961388 + AluSx SINE Alu 1 311 -1 207 240 62 62 chr2 223726579 223726675 -26961179 - MIR SINE MIR -67 195 100 323 266 13 0 chr2 223726874 223726953 -26960901 - MER5A DNA MER1_type -84 105 26 188 282 0 82 chr2 223726977 223727087 -26960767 + MER5A DNA MER1_type 1 101 -88 307 341 6 24 chr2 223727415 223727582 -26960272 + GA-rich Low_complexity Low_complexity 3 166 0 30 0 0 0 chr2 223727865 223727895 -26959959 + AT_rich Low_complexity Low_complexity 1 30 0 1207 237 85 9 chr2 223727895 223728329 -26959525 + L1M4 LINE L1 4143 4609 -1537 201 222 22 0 chr2 223728463 223728508 -26959346 + (TTA)n Simple_repeat Simple_repeat 2 47 0 387 304 132 0 chr2 223729680 223729900 -26957954 - MIR SINE MIR -6 256 8 209 236 60 17 chr2 223730260 223730345 -26957509 + MIR SINE MIR 18 105 -103 209 164 0 36 chr2 223730366 223730421 -26957433 + (TTATG)n Simple_repeat Simple_repeat 3 55 0 22 0 0 0 chr2 223730829 223730851 -26957003 + AT_rich Low_complexity Low_complexity 1 22 0 600 240 98 66 chr2 223731072 223731530 -26956324 - MLT1H LTR MaLR -3 546 1 207 0 0 0 chr2 223731779 223731802 -26956052 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 318 106 0 0 chr2 223732426 223732473 -26955381 + (CA)n Simple_repeat Simple_repeat 2 48 0 566 278 118 26 chr2 223732923 223733193 -26954661 - L2 LINE L2 0 3313 3019 846 294 64 40 chr2 223733655 223734251 -26953603 + L1MC4a LINE L1 3743 4352 -1794 521 298 103 83 chr2 223734298 223735073 -26952781 + L1MC4a LINE L1 4456 5246 -900 4986 214 71 115 chr2 223735083 223736350 -26951504 + L1MC4a LINE L1 5255 6576 -1232 2109 125 3 7 chr2 223736350 223736653 -26951201 + AluSx SINE Alu 1 302 -10 4986 214 71 115 chr2 223736653 223736845 -26951009 + L1MC4a LINE L1 6576 6775 -1033 333 0 0 0 chr2 223736845 223736882 -26950972 + (TG)n Simple_repeat Simple_repeat 2 38 0 4986 214 71 115 chr2 223736882 223737786 -26950068 + L1MC4a LINE L1 6775 7516 -292 1927 170 13 3 chr2 223737804 223738116 -26949738 - MLT2B1 LTR ERVL -205 315 1 352 208 66 19 chr2 223738494 223738600 -26949254 - MIR3 SINE MIR -33 175 65 4921 52 18 0 chr2 223738783 223739380 -26948474 + L1PA5 LINE L1 5542 6149 -5 1148 282 84 12 chr2 223740322 223740751 -26947103 + LTR33 LTR ERVL 56 515 -6 234 156 0 0 chr2 223740765 223740810 -26947044 + (CA)n Simple_repeat Simple_repeat 1 45 0 224 308 68 0 chr2 223741757 223741874 -26945980 + L2 LINE L2 3189 3313 0 456 237 71 0 chr2 223742274 223742403 -26945451 - MIR SINE MIR -66 142 28 264 333 58 0 chr2 223742393 223742513 -26945341 - L3 LINE CR1 -162 1415 1289 * 184 340 116 58 chr2 223743278 223743542 -26944312 - L2 LINE L2 -476 2838 2591 2111 119 3 0 chr2 223743542 223743836 -26944018 + AluSq SINE Alu 1 295 -18 184 340 116 58 chr2 223743836 223744139 -26943715 - L2 LINE L2 -723 2591 2238 297 269 43 0 chr2 223744140 223744233 -26943621 + CT-rich Low_complexity Low_complexity 3 99 0 247 208 56 56 chr2 223745953 223746025 -26941829 - MLT1K LTR MaLR -6 582 511 187 277 0 0 chr2 223748450 223748497 -26939357 - MIR SINE MIR -1 261 215 346 281 52 7 chr2 223749604 223749739 -26938115 - MIR SINE MIR -102 160 20 724 164 37 74 chr2 223750842 223750909 -26936945 + MER96B DNA MER1_type? 232 300 -117 288 0 0 0 chr2 223750909 223750941 -26936913 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 2281 89 3 0 chr2 223750943 223751225 -26936629 - AluSp SINE Alu -30 283 1 724 164 37 74 chr2 223751225 223751343 -26936511 + MER96B DNA MER1_type? 301 413 -4 413 306 18 35 chr2 223751367 223751537 -26936317 + MIR SINE MIR 96 262 0 207 69 0 0 chr2 223752215 223752244 -26935610 + (T)n Simple_repeat Simple_repeat 1 29 0 189 182 182 12 chr2 223753058 223753145 -26934709 + MIR SINE MIR 85 190 -72 333 237 38 23 chr2 223753978 223754109 -26933745 + LTR33 LTR ERVL 3 135 -386 291 351 15 8 chr2 223755119 223755253 -26932601 + MIR SINE MIR 15 149 -113 2329 105 0 3 chr2 223755441 223755745 -26932109 - AluSc SINE Alu -1 308 6 1802 121 80 47 chr2 223756101 223756464 -26931390 + THE1C LTR MaLR 1 375 0 713 233 75 25 chr2 223756782 223757022 -26930832 - MIR SINE MIR -5 257 6 2187 120 7 0 chr2 223758012 223758312 -26929542 - AluSx SINE Alu -10 302 1 216 236 14 28 chr2 223758838 223758910 -26928944 + CT-rich Low_complexity Low_complexity 3 73 0 207 0 0 0 chr2 223760694 223760717 -26927137 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 2074 85 3 54 chr2 223760717 223761012 -26926842 - AluSx SINE Alu -32 280 1 216 207 86 0 chr2 223761157 223761215 -26926639 - MIR SINE MIR 0 262 200 857 285 50 29 chr2 223761231 223761614 -26926240 + L2 LINE L2 2919 3309 -4 248 361 9 0 chr2 223761612 223761720 -26926134 - MIR SINE MIR -112 150 42 * 998 263 72 37 chr2 223762922 223763384 -26924470 + LTR33A LTR ERVL 54 521 -2 189 250 42 0 chr2 223765016 223765064 -26922790 + L2 LINE L2 3229 3278 -35 439 269 120 34 chr2 223765348 223765582 -26922272 - MER102a DNA MER1_type -6 324 71 1236 218 112 77 chr2 223766047 223766529 -26921325 - MLT1F1 LTR MaLR 0 567 69 489 296 184 9 chr2 223769856 223770079 -26917775 + MLT1K LTR MaLR 2 263 -325 348 194 16 0 chr2 223770087 223770149 -26917705 + MLT1K LTR MaLR 413 475 -113 1866 116 4 0 chr2 223771652 223771911 -26915943 - AluSx SINE Alu -6 306 47 214 359 32 32 chr2 223771922 223772078 -26915776 + MIR3 SINE MIR 32 187 -21 238 298 129 8 chr2 223773650 223773774 -26914080 - MIR3 SINE MIR -24 184 46 258 274 27 0 chr2 223774385 223774458 -26913396 - MIR3 SINE MIR -23 185 111 198 0 0 0 chr2 223775247 223775269 -26912585 + (T)n Simple_repeat Simple_repeat 1 22 0 306 329 48 30 chr2 223776784 223776951 -26910903 - MIR3 SINE MIR -20 188 19 267 174 0 0 chr2 223777944 223777990 -26909864 - L2 LINE L2 -259 3054 3009 234 86 29 0 chr2 223778190 223778225 -26909629 + MER97b DNA MER1_type? 143 178 -875 425 304 6 12 chr2 223778898 223779066 -26908788 + CT-rich Low_complexity Low_complexity 1 167 0 374 299 70 40 chr2 223779152 223779353 -26908501 + MIR SINE MIR 35 241 -21 1719 187 3 10 chr2 223779675 223779975 -26907879 - AluJb SINE Alu -14 298 1 24 0 0 0 chr2 223780270 223780294 -26907560 + AT_rich Low_complexity Low_complexity 1 24 0 254 289 47 8 chr2 223780462 223780590 -26907264 + L2 LINE L2 3106 3238 -75 393 223 79 0 chr2 223781542 223781681 -26906173 + MER113 DNA MER1_type? 2 151 -370 4473 112 8 9 chr2 223781707 223782368 -26905486 + L1PA16 LINE L1 5315 5974 -192 2195 127 3 0 chr2 223782368 223782675 -26905179 + AluSx SINE Alu 1 308 -4 256 163 0 0 chr2 223782741 223782784 -26905070 + L1PA16 LINE L1 6094 6136 -30 330 255 50 13 chr2 223782907 223783331 -26904523 + (TG)n Simple_repeat Simple_repeat 1 439 0 210 122 51 64 chr2 223783332 223783488 -26904366 + (GTGTG)n Simple_repeat Simple_repeat 2 155 0 296 244 52 12 chr2 223783493 223783665 -26904189 + (TG)n Simple_repeat Simple_repeat 1 179 0 221 153 83 6 chr2 223783688 223783854 -26904000 + (TG)n Simple_repeat Simple_repeat 1 178 0 333 159 74 51 chr2 223783875 223784051 -26903803 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 271 307 110 0 chr2 223785446 223785573 -26902281 + Charlie8 DNA MER1_type 103 243 -2174 2197 93 32 0 chr2 223786656 223786936 -26900918 + AluSx SINE Alu 1 289 -23 2026 106 0 0 chr2 223787181 223787445 -26900409 + AluSc SINE Alu 39 302 -7 403 304 50 6 chr2 223788216 223788377 -26899477 + MIR3 SINE MIR 37 204 -4 333 0 0 0 chr2 223788614 223788651 -26899203 + (CA)n Simple_repeat Simple_repeat 1 37 0 623 223 88 52 chr2 223788852 223789103 -26898751 + MIR SINE MIR 2 261 -1 217 244 67 101 chr2 223789115 223789234 -26898620 - MIR SINE MIR -57 151 37 301 271 47 0 chr2 223791326 223791411 -26896443 - MIR3 SINE MIR -34 174 86 605 250 82 49 chr2 223792133 223792589 -26895265 - MLT1G1 LTR MaLR -2 590 25 251 260 137 55 chr2 223793104 223793250 -26894604 + MIR SINE MIR 86 243 -19 281 326 15 15 chr2 223793359 223793494 -26894360 + GA-rich Low_complexity Low_complexity 4 138 0 28 71 0 0 chr2 223794353 223794409 -26893445 + AT_rich Low_complexity Low_complexity 1 56 0 21 0 0 0 chr2 223794682 223794703 -26893151 + AT_rich Low_complexity Low_complexity 1 21 0 2245 125 0 3 chr2 223794730 223795041 -26892813 - AluSg SINE Alu 0 310 1 330 87 0 0 chr2 223795859 223795905 -26891949 + (CA)n Simple_repeat Simple_repeat 2 47 0 319 245 0 39 chr2 223795939 223796041 -26891813 - LTR33 LTR ERVL -49 472 375 416 303 67 17 chr2 223796151 223796329 -26891525 - LTR33 LTR ERVL -326 195 9 702 231 12 6 chr2 223797329 223797489 -26890365 + MER5B DNA MER1_type 6 166 -12 485 326 33 19 chr2 223798439 223798654 -26889200 + MIR SINE MIR 42 259 -3 350 298 10 32 chr2 223798710 223798888 -26888966 + MIR SINE MIR 16 190 -63 213 333 138 13 chr2 223799247 223799406 -26888448 + MIR3 SINE MIR 30 208 0 316 283 192 6 chr2 223799454 223799631 -26888223 + L3 LINE CR1 1367 1576 -1 252 353 52 29 chr2 223801311 223801447 -26886407 - L2 LINE L2 0 3272 3134 217 299 13 0 chr2 223801824 223801901 -26885953 + MIR SINE MIR 66 143 -65 215 231 170 41 chr2 223802453 223802600 -26885254 - MIR3 SINE MIR -6 202 37 229 255 0 0 chr2 223802748 223802795 -26885059 - MLT1L LTR MaLR -122 493 447 2552 69 0 0 chr2 223802941 223803247 -26884607 - AluY SINE Alu -5 306 1 253 185 37 19 chr2 223803289 223803343 -26884511 - MLT1J2 LTR MaLR -327 123 69 22 35 0 0 chr2 223804907 223804936 -26882918 + AT_rich Low_complexity Low_complexity 1 29 0 302 328 17 33 chr2 223806368 223806548 -26881306 - L2 LINE L2 -503 2811 2635 209 351 0 0 chr2 223807263 223807437 -26880417 + (GCTG)n Simple_repeat Simple_repeat 1 174 0 * 270 327 0 0 chr2 223807331 223807493 -26880361 + (TG)n Simple_repeat Simple_repeat 1 162 0 943 166 18 12 chr2 223807519 223807688 -26880166 + MLT1B LTR MaLR 1 170 -220 2001 150 24 0 chr2 223807701 223808034 -26879820 + MER2 DNA MER2_type 2 342 -2 5082 136 79 40 chr2 223808038 223808894 -26878960 + L1MA9 LINE L1 5254 6076 -236 3588 116 0 70 chr2 223808894 223809461 -26878393 - MER1A DNA MER1_type 0 527 1 5082 136 79 40 chr2 223809461 223809510 -26878344 + L1MA9 LINE L1 6076 6122 -190 360 0 0 0 chr2 223809510 223809550 -26878304 + (CA)n Simple_repeat Simple_repeat 2 41 0 5082 136 79 40 chr2 223809550 223809633 -26878221 + L1MA9 LINE L1 6122 6281 -31 739 195 115 91 chr2 223809633 223809920 -26877934 + MLT1B LTR MaLR 170 463 -4 473 221 69 28 chr2 223811913 223812058 -26875796 + MIR SINE MIR 100 250 -12 190 340 21 0 chr2 223812074 223812168 -26875686 + L2 LINE L2 2554 2649 -665 2092 119 44 0 chr2 223812441 223812736 -26875118 - AluSx SINE Alu -4 308 1 763 161 101 50 chr2 223814711 223814910 -26872944 - MER3 DNA MER1_type 0 209 1 204 67 0 0 chr2 223815156 223815186 -26872668 + (TA)n Simple_repeat Simple_repeat 2 31 0 255 177 0 0 chr2 223815186 223815244 -26872610 - L1MA5A LINE L1 -1 6296 6242 277 196 0 65 chr2 223815537 223815629 -26872225 - Charlie8 DNA MER1_type -2244 173 88 2378 109 0 0 chr2 223815836 223816149 -26871705 - AluSp SINE Alu 0 313 1 2107 146 122 8 chr2 223816254 223816638 -26871216 + MSTA LTR MaLR 1 428 0 1728 198 13 35 chr2 223817192 223817565 -26870289 - MLT1A1 LTR MaLR 0 365 1 186 346 49 0 chr2 223817721 223817802 -26870052 - L3b LINE CR1 -125 1458 1374 219 69 0 0 chr2 223818441 223818470 -26869384 + (TG)n Simple_repeat Simple_repeat 1 29 0 198 0 0 0 chr2 223818716 223818738 -26869116 + (A)n Simple_repeat Simple_repeat 1 22 0 1028 265 12 8 chr2 223819505 223819750 -26868104 - MIR SINE MIR -2 260 15 348 225 7 7 chr2 223820368 223820519 -26867335 + GA-rich Low_complexity Low_complexity 1 151 0 255 170 0 0 chr2 223820777 223820824 -26867030 + C-rich Low_complexity Low_complexity 2 48 0 293 365 82 35 chr2 223820851 223821276 -26866578 + L2 LINE L2 2818 3262 -10 183 320 51 0 chr2 223821375 223821453 -26866401 - MIR SINE MIR -78 130 49 265 404 48 0 chr2 223821453 223821557 -26866297 + L2 LINE L2 3146 3254 -18 207 361 58 13 chr2 223821824 223821979 -26865875 - L3b LINE CR1 -76 1507 1346 317 261 158 54 chr2 223822243 223822446 -26865408 + MIR SINE MIR 29 252 -10 294 304 20 0 chr2 223824348 223824450 -26863404 - MIR SINE MIR -100 162 59 517 108 0 0 chr2 223824572 223824646 -26863208 + MER53 DNA DNA 1 74 -115 274 188 125 0 chr2 223824661 223824741 -26863113 + MER114 LTR ERV 483 572 -76 3553 131 26 31 chr2 223824768 223825341 -26862513 + L1PA16 LINE L1 5581 6150 -16 2261 209 42 28 chr2 223825734 223826299 -26861555 - L1MD3 LINE L1 -16 7979 7407 247 206 88 0 chr2 223826305 223826373 -26861481 - MLT1F1 LTR MaLR -436 131 58 252 0 0 0 chr2 223827594 223827622 -26860232 + (TG)n Simple_repeat Simple_repeat 2 29 0 191 233 150 33 chr2 223828570 223828630 -26859224 - MIR3 SINE MIR -132 76 10 208 236 0 18 chr2 223830400 223830455 -26857399 + CT-rich Low_complexity Low_complexity 4 57 0 196 364 121 35 chr2 223830747 223830920 -26856934 + L3 LINE CR1 1377 1564 -13 824 236 23 41 chr2 223830935 223831155 -26856699 + MIR SINE MIR 41 256 -6 581 264 91 15 chr2 223831431 223831628 -26856226 - MLT1C LTR MaLR 0 467 256 560 107 69 10 chr2 223835165 223835454 -26852400 + (TA)n Simple_repeat Simple_repeat 1 306 0 325 74 115 0 chr2 223835470 223835618 -26852236 + (TA)n Simple_repeat Simple_repeat 2 166 0 428 97 73 6 chr2 223835630 223835795 -26852059 + (TA)n Simple_repeat Simple_repeat 1 176 0 30 0 0 0 chr2 223835795 223835825 -26852029 + AT_rich Low_complexity Low_complexity 1 30 0 198 36 107 0 chr2 223835825 223835881 -26851973 + (TA)n Simple_repeat Simple_repeat 2 63 0 268 119 34 0 chr2 223836430 223836489 -26851365 + GA-rich Low_complexity Low_complexity 2 62 0 312 291 118 8 chr2 223837713 223837950 -26849904 + L1ME LINE L1 5548 5810 -311 196 338 14 28 chr2 223838285 223838356 -26849498 - MIR SINE MIR -187 75 6 198 354 61 0 chr2 223839992 223840074 -26847780 + L2 LINE L2 3149 3235 -37 233 75 25 0 chr2 223840117 223840157 -26847697 + (GA)n Simple_repeat Simple_repeat 2 42 0 708 199 23 0 chr2 223840507 223840638 -26847216 + AluSg/x SINE Alu 170 303 -7 536 261 43 38 chr2 223840809 223841020 -26846834 - MARNA DNA Mariner -145 441 230 2123 130 0 3 chr2 223841340 223841639 -26846215 - AluSx SINE Alu -12 300 3 200 42 0 0 chr2 223841742 223841766 -26846088 + (TA)n Simple_repeat Simple_repeat 2 25 0 381 131 0 0 chr2 223841766 223841827 -26846027 + (CA)n Simple_repeat Simple_repeat 2 62 0 346 171 26 0 chr2 223843367 223843443 -26844411 + L1MA10 LINE L1 6256 6333 -1 1516 261 47 14 chr2 223843536 223844027 -26843827 - L1ME2 LINE L1 -72 6092 5586 2560 219 97 54 chr2 223844071 223844824 -26843030 - MER21B LTR ERV1 -60 803 19 3931 178 69 18 chr2 223844910 223845816 -26842038 - L1MB8 LINE L1 -27 6151 5203 1737 170 3 11 chr2 223846288 223846603 -26841251 + AluJb SINE Alu 3 315 0 189 0 0 0 chr2 223846929 223846950 -26840904 + (CAT)n Simple_repeat Simple_repeat 1 21 0 1643 115 0 0 chr2 223847050 223847268 -26840586 + AluSg/x SINE Alu 84 301 -9 2013 265 42 12 chr2 223847270 223847916 -26839938 + L1M4 LINE L1 3572 4236 -1910 897 172 49 20 chr2 223847921 223848124 -26839730 - MER20 DNA MER1_type -5 214 6 1817 223 76 13 chr2 223848364 223848827 -26839027 - L1ME LINE L1 -405 5761 5270 * 3907 214 30 20 chr2 223848808 223848962 -26838892 - L1MB8 LINE L1 -3 6331 6180 324 0 0 0 chr2 223848962 223848998 -26838856 + (TG)n Simple_repeat Simple_repeat 2 37 0 3907 214 30 20 chr2 223848998 223849820 -26838034 - L1MB8 LINE L1 -154 6180 5349 363 250 40 0 chr2 223850125 223850225 -26837629 + L1MEc LINE L1 1840 1927 -4613 328 312 113 62 chr2 223851690 223851982 -26835872 + L3b LINE CR1 1277 1583 0 315 0 0 0 chr2 223852151 223852186 -26835668 + (CA)n Simple_repeat Simple_repeat 1 35 0 187 266 161 0 chr2 223852335 223852437 -26835417 - MIR SINE MIR -1 207 81 337 318 112 9 chr2 223853536 223853750 -26834104 + MIR SINE MIR 15 250 -12 182 278 185 0 chr2 223853810 223853864 -26833990 + L2 LINE L2 2657 2720 -594 370 313 120 0 chr2 223853878 223854028 -26833826 + L2 LINE L2 2692 2859 -455 507 326 147 30 chr2 223854054 223854484 -26833370 + L2 LINE L2 2829 3308 -5 435 301 161 11 chr2 223855290 223855476 -26832378 - MIR SINE MIR 0 262 49 189 0 0 0 chr2 223855541 223855562 -26832292 + (CATAG)n Simple_repeat Simple_repeat 3 23 0 270 0 0 0 chr2 223856389 223856419 -26831435 + (TG)n Simple_repeat Simple_repeat 2 31 0 230 319 22 33 chr2 223856750 223856841 -26831013 - L3 LINE CR1 -312 1265 1176 412 336 8 8 chr2 223857202 223857330 -26830524 - L2 LINE L2 -1 3271 3144 1097 194 29 5 chr2 223857638 223857844 -26830010 + MER20 DNA MER1_type 9 219 0 485 277 37 113 chr2 223858560 223858828 -26829026 - MIR SINE MIR 0 262 12 1812 249 40 20 chr2 223859987 223860482 -26827372 - MLT1D LTR MaLR 0 505 1 449 167 0 83 chr2 223860727 223860823 -26827031 - MER20 DNA MER1_type -9 210 123 2072 151 3 0 chr2 223860848 223861152 -26826702 + AluSx SINE Alu 1 305 -7 611 213 7 7 chr2 223861153 223861303 -26826551 - MER53 DNA DNA -17 172 23 503 194 0 65 chr2 223861331 223861439 -26826415 - MER20 DNA MER1_type -115 104 4 218 32 32 0 chr2 223862005 223862036 -26825818 + (TC)n Simple_repeat Simple_repeat 1 32 0 342 0 0 0 chr2 223862038 223862076 -26825778 + (CA)n Simple_repeat Simple_repeat 2 39 0 674 232 0 0 chr2 223863222 223863360 -26824494 - L1ME2 LINE L1 -9 6224 6087 506 224 229 24 chr2 223863366 223863536 -26824318 - MER63A DNA MER1_type 0 210 6 2075 207 106 42 chr2 223863541 223864192 -26823662 - L1ME2 LINE L1 -145 6088 5396 2879 247 136 31 chr2 223864195 223865366 -26822488 - L1ME2 LINE L1 -2586 3629 2308 2239 97 21 18 chr2 223865366 223865705 -26822149 + L1MA2 LINE L1 5965 6304 0 2879 247 136 31 chr2 223865705 223865826 -26822028 - L1ME2 LINE L1 -3907 2308 2201 735 254 40 35 chr2 223865838 223866184 -26821670 - L1ME2 LINE L1 -4130 2266 1919 372 309 0 43 chr2 223866247 223866363 -26821491 - L1ME2 LINE L1 -6202 194 85 2153 185 86 7 chr2 223866363 223866796 -26821058 - MLT1C LTR MaLR 0 467 1 372 309 0 43 chr2 223866796 223866841 -26821013 - L1ME2 LINE L1 -6311 85 40 368 296 19 9 chr2 223867128 223867236 -26820618 - L2 LINE L2 -15 3298 3190 979 254 95 75 chr2 223867609 223867735 -26820119 + MLT1L LTR MaLR 129 251 -364 2336 117 0 0 chr2 223867735 223868043 -26819811 - AluSx SINE Alu -4 308 1 979 254 95 75 chr2 223868043 223868357 -26819497 + MLT1L LTR MaLR 251 578 -37 323 364 15 0 chr2 223869483 223869615 -26818239 - MIR3 SINE MIR -8 200 67 * 718 274 24 40 chr2 223869596 223869844 -26818010 + MIR SINE MIR 5 249 -13 222 207 0 0 chr2 223871585 223871643 -26816211 + T-rich Low_complexity Low_complexity 2 59 0 3232 244 72 21 chr2 223872463 223872517 -26815337 - L1 LINE L1 -1676 4968 4918 15699 118 2 15 chr2 223872517 223875830 -26812024 - L1PA8 LINE L1 0 6172 2892 3232 244 72 21 chr2 223875830 223876316 -26811538 - L1 LINE L1 -1726 4918 4458 532 53 40 0 chr2 223876316 223876392 -26811462 + MADE1 DNA Mariner 2 80 0 3232 244 72 21 chr2 223876392 223877792 -26810062 - L1 LINE L1 -2186 4458 2908 5409 175 10 14 chr2 223877836 223878867 -26808987 - L1PA16 LINE L1 -9 6157 5140 2255 119 0 0 chr2 223878867 223879161 -26808693 - AluSg SINE Alu -16 294 1 5409 175 10 14 chr2 223879161 223880179 -26807675 - L1PA16 LINE L1 -1026 5140 4119 * 5541 242 60 38 chr2 223880172 223880669 -26807185 - L1 LINE L1 -3728 2916 2431 2126 109 7 0 chr2 223880669 223880954 -26806900 + AluSx SINE Alu 1 287 -25 5541 242 60 38 chr2 223880954 223883304 -26804550 - L1 LINE L1 -4213 2431 2 426 242 75 3 chr2 223883308 223883459 -26804395 - L1MC/D LINE L1 -554 5608 5450 3616 259 55 46 chr2 223883493 223884884 -26802970 - L1MC/D LINE L1 -991 5155 3739 2334 110 0 3 chr2 223884884 223885194 -26802660 - AluSc SINE Alu 0 309 1 3616 259 55 46 chr2 223885194 223885799 -26802055 - L1MC/D LINE L1 -2407 3739 3141 2147 114 3 7 chr2 223885918 223886217 -26801637 - AluSc SINE Alu -11 298 1 243 232 18 0 chr2 223886305 223886361 -26801493 + MIR SINE MIR 100 156 -106 502 254 67 57 chr2 223886947 223887194 -26800660 - MLT1H LTR MaLR -259 290 1 610 263 130 81 chr2 223887964 223888371 -26799483 - MLT1H LTR MaLR 0 549 123 708 185 0 0 chr2 223888516 223888635 -26799219 - FRAM SINE Alu -29 147 29 201 224 0 52 chr2 223890521 223890579 -26797275 - MIR SINE MIR -79 183 129 216 319 0 14 chr2 223891665 223891737 -26796117 + L2 LINE L2 3179 3249 -64 338 360 50 0 chr2 223892057 223892196 -26795658 - MIR SINE MIR -20 242 97 245 243 204 66 chr2 223892411 223892554 -26795300 - L1ME4a LINE L1 -10 6111 5989 195 42 0 0 chr2 223892554 223892578 -26795276 + (CATA)n Simple_repeat Simple_repeat 4 27 0 245 243 204 66 chr2 223892578 223892685 -26795169 - L1ME4a LINE L1 -132 5989 5898 2433 90 0 0 chr2 223892685 223892996 -26794858 - AluY SINE Alu 0 311 1 245 243 204 66 chr2 223892996 223893106 -26794748 - L1ME4a LINE L1 -223 5898 5700 259 133 0 0 chr2 223893168 223893213 -26794641 - L1ME4a LINE L1 -691 5430 5386 335 294 47 0 chr2 223893381 223893466 -26794388 - MIR3 SINE MIR -31 177 89 28 48 0 0 chr2 223893830 223893872 -26793982 + AT_rich Low_complexity Low_complexity 1 42 0 2133 99 41 7 chr2 223893961 223894255 -26793599 + AluSc SINE Alu 1 304 -5 518 86 12 0 chr2 223894913 223894994 -26792860 + (TC)n Simple_repeat Simple_repeat 1 82 0 239 269 32 21 chr2 223895570 223895663 -26792191 + GA-rich Low_complexity Low_complexity 2 95 0 690 204 0 0 chr2 223898209 223898322 -26789532 + FLAM_A SINE Alu 1 113 -29 36 23 0 0 chr2 223898356 223898399 -26789455 + AT_rich Low_complexity Low_complexity 1 43 0 207 167 0 0 chr2 223898641 223898683 -26789171 + (TCTG)n Simple_repeat Simple_repeat 3 44 0 287 356 136 24 chr2 223899954 223900249 -26787605 + L3 LINE CR1 1188 1515 -62 830 122 36 7 chr2 223900420 223900559 -26787295 + L1PA14 LINE L1 6017 6159 -2 405 0 0 0 chr2 223900643 223900688 -26787166 + (TG)n Simple_repeat Simple_repeat 2 46 0 457 268 33 60 chr2 223902119 223902302 -26785552 - MIR3 SINE MIR -15 193 16 8959 67 8 0 chr2 223902335 223904290 -26783564 - L1PA7 LINE L1 -15 6139 4181 538 82 0 0 chr2 223904290 223904375 -26783479 - L1PA7 LINE L1 -2822 3324 3240 226 239 76 65 chr2 223905156 223905248 -26782606 - MIR SINE MIR -81 127 35 399 314 26 11 chr2 223905432 223905567 -26782287 - MER5A DNA MER1_type -45 133 9 202 344 80 8 chr2 223906785 223906910 -26780944 + MIR SINE MIR 58 191 -71 596 163 7 109 chr2 223907429 223907576 -26780278 + L1MA8 LINE L1 6155 6286 -5 243 88 0 0 chr2 223907617 223907651 -26780203 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 436 283 7 14 chr2 223907679 223907817 -26780037 + MIR SINE MIR 124 260 -2 13088 128 40 58 chr2 223907926 223910386 -26777468 - Tigger1 DNA MER2_type 0 2418 2 1685 172 74 24 chr2 223910602 223910979 -26776875 + MSTD LTR MaLR 1 396 0 1066 246 75 48 chr2 223911414 223911920 -26775934 - MLT1H LTR MaLR 0 549 1 1202 297 102 45 chr2 223911925 223912227 -26775627 - L3 LINE CR1 -207 1370 1087 2019 246 49 26 chr2 223912227 223912838 -26775016 + MLT1E2 LTR MaLR 1 625 -1 1202 297 102 45 chr2 223912838 223913181 -26774673 - L3 LINE CR1 -490 1087 688 259 320 146 43 chr2 223913299 223913552 -26774302 + L2 LINE L2 3008 3286 -27 270 250 26 35 chr2 223914296 223914412 -26773442 - MLT1L LTR MaLR -345 270 156 198 0 0 0 chr2 223915025 223915047 -26772807 + (T)n Simple_repeat Simple_repeat 1 22 0 387 270 44 50 chr2 223915190 223915349 -26772505 - MIR SINE MIR -41 221 64 2233 113 0 0 chr2 223915577 223915879 -26771975 + AluSq SINE Alu 1 302 -11 25 31 0 0 chr2 223916624 223916656 -26771198 + AT_rich Low_complexity Low_complexity 1 32 0 6405 132 34 38 chr2 223917234 223918105 -26769749 - Tigger3b DNA MER2_type -1797 1231 364 2103 82 58 3 chr2 223918105 223918396 -26769458 - AluSq SINE Alu -6 307 1 6405 132 34 38 chr2 223918396 223918748 -26769106 - Tigger3b DNA MER2_type -2664 364 12 399 216 39 0 chr2 223919306 223919408 -26768446 + MER94 DNA DNA 1 106 -28 195 386 119 28 chr2 223920606 223920857 -26766997 - L2 LINE L2 -161 3111 2838 281 194 75 157 chr2 223920889 223920964 -26766890 - MIR3 SINE MIR -3 205 144 2174 141 0 6 chr2 223920964 223921277 -26766577 + AluSx SINE Alu 1 311 -1 281 194 75 157 chr2 223921277 223921335 -26766519 - MIR3 SINE MIR -64 144 83 390 195 0 0 chr2 223921754 223921836 -26766018 + (TA)n Simple_repeat Simple_repeat 2 83 0 421 259 181 0 chr2 223922226 223922431 -26765423 + LTR16A LTR ERVL 209 450 0 275 302 38 28 chr2 223922685 223922791 -26765063 - MER5B DNA MER1_type -5 173 67 375 263 0 103 chr2 223922832 223923030 -26764824 - MIR SINE MIR -49 213 40 210 297 129 20 chr2 223923464 223923503 -26764351 - L2 LINE L2 -8 3264 3231 1312 181 89 37 chr2 223923503 223923829 -26764025 + MER2 DNA MER2_type 1 343 -1 210 297 129 20 chr2 223923829 223923890 -26763964 - L2 LINE L2 -41 3231 3153 705 326 88 65 chr2 223924161 223924968 -26762886 + L2 LINE L2 2443 3272 0 236 380 11 0 chr2 223924995 223925087 -26762767 - L2 LINE L2 -32 3240 3148 931 210 82 0 chr2 223925654 223925849 -26762005 + MER58A DNA MER1_type 14 224 0 659 160 38 0 chr2 223925853 223925984 -26761870 + MER105 DNA DNA 27 162 -42 5060 109 21 62 chr2 223926610 223927112 -26760742 + MER4D LTR ERV1 1 522 -350 2247 109 0 6 chr2 223927112 223927423 -26760431 + AluSg1 SINE Alu 1 309 0 5060 109 21 62 chr2 223927423 223927482 -26760372 + MER4D LTR ERV1 522 582 -290 5028 82 53 0 chr2 223927482 223928174 -26759680 - L1PA10 LINE L1 -4 6164 5436 5060 109 21 62 chr2 223928174 223928520 -26759334 + MER4D LTR ERV1 582 872 0 400 311 84 16 chr2 223928927 223929117 -26758737 + HAL1b LINE L1 599 801 -547 314 338 89 38 chr2 223929503 223929740 -26758114 - MIR SINE MIR -8 254 6 330 98 0 0 chr2 223929903 223929954 -26757900 + (TG)n Simple_repeat Simple_repeat 2 52 0 1822 84 13 4 chr2 223930127 223930364 -26757490 + AluSp SINE Alu 71 309 -4 758 88 0 0 chr2 223930510 223930612 -26757242 - L1PA14 LINE L1 -231 5930 5829 912 132 29 40 chr2 223930617 223930791 -26757063 + L1PA13 LINE L1 5992 6163 0 424 311 67 56 chr2 223930946 223931483 -26756371 + L1M4 LINE L1 2670 3212 -2934 403 148 34 11 chr2 223932139 223932227 -26755627 + L1MA10 LINE L1 6245 6334 0 184 136 51 0 chr2 223932324 223932383 -26755471 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 1571 146 3 108 chr2 223932563 223932898 -26754956 - AluJo SINE Alu -2 300 1 330 261 35 70 chr2 223932909 223933024 -26754830 - MIR SINE MIR -131 131 21 216 273 15 15 chr2 223934472 223934538 -26753316 + CT-rich Low_complexity Low_complexity 5 70 0 302 248 83 15 chr2 223935553 223935686 -26752168 - L3 LINE CR1 -214 1363 1222 327 310 80 0 chr2 223935701 223935801 -26752053 + L2 LINE L2 3148 3255 -17 268 299 104 8 chr2 223935943 223936077 -26751777 - MIR SINE MIR -109 153 7 245 326 11 80 chr2 223937114 223937289 -26750565 - MIR SINE MIR -63 199 37 346 280 64 16 chr2 223939477 223939602 -26748252 + MIR3 SINE MIR 67 197 -11 568 100 0 0 chr2 223939769 223939849 -26748005 - MADE1 DNA Mariner 0 80 1 4490 180 37 35 chr2 223940195 223941172 -26746682 - MER45B DNA AcHobo -61 979 1 2416 232 20 4 chr2 223941316 223941863 -26745991 + MLT1F1 LTR MaLR 12 567 0 3824 210 67 47 chr2 223943952 223945209 -26742645 - L1MC4 LINE L1 -124 7918 6637 12759 125 26 72 chr2 223945209 223946546 -26741308 - Tigger1 DNA MER2_type 0 2418 1252 2362 74 34 3 chr2 223946546 223946842 -26741012 - AluSg1 SINE Alu -4 305 1 12759 125 26 72 chr2 223946842 223948039 -26739815 - Tigger1 DNA MER2_type -1166 1252 1 719 255 74 26 chr2 223948117 223948713 -26739141 - L1MC4 LINE L1 -1207 6601 6018 1757 194 140 12 chr2 223948715 223949231 -26738623 + MLT1E2 LTR MaLR 2 596 -30 1223 243 75 39 chr2 223949244 223949710 -26738144 - L1MC4a LINE L1 -1786 6022 5540 521 315 68 50 chr2 223949750 223951434 -26736420 - L1MC4a LINE L1 -1383 4763 3050 4414 122 40 4 chr2 223951434 223952137 -26735717 - L1PA14 LINE L1 -4 6157 5430 11954 201 16 4 chr2 223952137 223954559 -26733295 - L1PA14 LINE L1 -1301 4845 2389 2857 19 0 0 chr2 223954559 223954877 -26732977 - AluYb8 SINE Alu 0 318 1 11954 201 16 4 chr2 223954877 223955072 -26732782 - L1PA14 LINE L1 -3757 2389 2198 681 288 66 78 chr2 223955191 223955558 -26732296 - L1MC4a LINE L1 -3198 2948 2589 1387 158 135 4 chr2 223955558 223955818 -26732036 - AluSx SINE Alu -8 294 1 681 288 66 78 chr2 223955818 223956040 -26731814 - L1MC4a LINE L1 -3557 2589 2366 255 79 0 0 chr2 223956297 223956335 -26731519 + (T)n Simple_repeat Simple_repeat 1 38 0 25 31 0 0 chr2 223956622 223956654 -26731200 + AT_rich Low_complexity Low_complexity 1 32 0 355 270 130 70 chr2 223957191 223957278 -26730576 - L1MC4a LINE L1 -3748 2398 2318 2155 84 49 11 chr2 223957278 223957564 -26730290 - AluSg SINE Alu -13 297 1 355 270 130 70 chr2 223957564 223957746 -26730108 - L1MC4a LINE L1 -3828 2318 2113 395 264 8 8 chr2 223957886 223958007 -26729847 - HAL1b LINE L1 -701 647 527 207 0 0 0 chr2 223958029 223958052 -26729802 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2421 40 0 0 chr2 223958358 223958632 -26729222 + AluY SINE Alu 24 297 -14 2024 151 0 0 chr2 223959224 223959523 -26728331 + AluSx SINE Alu 1 299 -13 24 32 0 0 chr2 223959555 223959586 -26728268 + AT_rich Low_complexity Low_complexity 1 31 0 22 80 0 0 chr2 223960050 223960100 -26727754 + AT_rich Low_complexity Low_complexity 1 50 0 503 96 78 0 chr2 223960642 223960809 -26727045 + (CA)n Simple_repeat Simple_repeat 1 180 0 582 64 55 0 chr2 223960846 223960955 -26726899 + (CA)n Simple_repeat Simple_repeat 2 116 0 318 186 0 0 chr2 223961432 223961502 -26726352 - MER53 DNA DNA -11 178 109 28 0 0 0 chr2 223961529 223961557 -26726297 + AT_rich Low_complexity Low_complexity 1 28 0 509 158 0 0 chr2 223961603 223961698 -26726156 + MER53 DNA DNA 95 189 0 1252 209 9 9 chr2 223962309 223962625 -26725229 + MER33 DNA MER1_type 9 324 0 296 242 40 20 chr2 223962637 223962736 -26725118 + Charlie7 DNA MER1_type 5 105 -2507 269 201 49 55 chr2 223962724 223962888 -26724966 + Charlie7 DNA MER1_type 2435 2597 -15 * 254 247 39 0 chr2 223963926 223964003 -26723851 + MER116 DNA Mariner 1 80 0 753 267 110 21 chr2 223964042 223964278 -26723576 + MIR SINE MIR 2 258 -4 326 307 59 7 chr2 223965238 223965391 -26722463 + MIR SINE MIR 21 181 -81 658 200 21 14 chr2 223966314 223966459 -26721395 - MER63A DNA MER1_type 0 210 65 4641 117 27 43 chr2 223971845 223972199 -26715655 - L1MA8 LINE L1 0 6291 5933 233 29 29 0 chr2 223972199 223972233 -26715621 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1819 178 0 10 chr2 223972235 223972528 -26715326 - AluJo SINE Alu -22 290 1 4641 117 27 43 chr2 223972528 223972938 -26714916 - L1MA8 LINE L1 -359 5932 5536 775 182 124 7 chr2 223974126 223974313 -26713541 + MIR SINE MIR 32 235 -27 2084 159 143 8 chr2 223974384 223974761 -26713093 - MSTA LTR MaLR 0 428 1 225 65 0 0 chr2 223974863 223974894 -26712960 + (CTATA)n Simple_repeat Simple_repeat 5 35 0 1905 150 150 53 chr2 223974900 223975352 -26712502 + LTR54B LTR ERV1 1 496 -2 208 267 80 76 chr2 223975406 223975631 -26712223 - L2 LINE L2 -788 2526 2301 2036 112 54 0 chr2 223976064 223976342 -26711512 + AluSc SINE Alu 1 293 -16 2101 137 0 3 chr2 223976389 223976688 -26711166 - AluSg SINE Alu -12 298 1 492 330 145 0 chr2 223977441 223977668 -26710186 + MIR SINE MIR 2 261 -1 980 282 48 50 chr2 223977748 223978124 -26709730 + LTR16C LTR ERVL 109 483 -8 277 340 33 20 chr2 223979026 223979176 -26708678 + MER5A DNA MER1_type 7 158 -31 308 200 154 0 chr2 223979191 223979256 -26708598 - MER81 DNA DNA -36 78 4 2039 254 57 31 chr2 223979821 223980397 -26707457 + MLT1E LTR MaLR 1 591 -2 656 47 28 9 chr2 223981326 223981432 -26706422 + (TAGA)n Simple_repeat Simple_repeat 4 111 0 263 246 0 18 chr2 223981487 223981544 -26706310 - MIR3 SINE MIR -15 193 138 5139 160 39 20 chr2 223981561 223982061 -26705793 - L1MB3 LINE L1 0 6183 5694 404 35 35 0 chr2 223982061 223982118 -26705736 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 2102 113 0 0 chr2 223982118 223982401 -26705453 - AluSx SINE Alu -29 283 1 5139 160 39 20 chr2 223982401 223982593 -26705261 - L1MB3 LINE L1 -489 5694 5507 180 0 0 0 chr2 223982593 223982613 -26705241 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 5139 160 39 20 chr2 223982613 223983183 -26704671 - L1MB3 LINE L1 -676 5507 4898 450 248 80 0 chr2 223983188 223983301 -26704553 - MIR SINE MIR -62 146 25 28 0 0 0 chr2 223983322 223983350 -26704504 + AT_rich Low_complexity Low_complexity 1 28 0 1445 229 95 81 chr2 223983443 223984001 -26703853 + MLT1F1 LTR MaLR 2 567 0 2460 183 70 114 chr2 223984572 223985333 -26702521 + LTR8A LTR ERV1 1 727 0 415 248 46 1 chr2 223985484 223985595 -26702259 + MIR SINE MIR 42 156 -67 227 186 443 0 chr2 223985716 223985786 -26702068 - MIR SINE MIR -115 147 47 339 331 50 0 chr2 223988347 223988468 -26699386 - MIR3 SINE MIR -1 207 81 275 151 0 38 chr2 223990806 223990859 -26696995 + MADE1 DNA Mariner 1 51 -29 312 271 14 0 chr2 223990872 223990942 -26696912 + L2 LINE L2 3199 3269 -3 1453 190 33 107 chr2 223991159 223991580 -26696274 - MLT1B LTR MaLR 0 390 1 571 304 51 53 chr2 223991583 223991988 -26695866 + MER115 DNA AcHobo 21 485 -208 566 219 23 0 chr2 223991984 223992112 -26695742 + Zaphod DNA AcHobo 3898 4028 -3 * 3506 196 59 3 chr2 223993384 223993468 -26694386 - L1MC3 LINE L1 -1 7784 7706 234 0 0 0 chr2 223993468 223993494 -26694360 + (CA)n Simple_repeat Simple_repeat 2 27 0 3506 196 59 3 chr2 223993494 223994135 -26693719 - L1MC3 LINE L1 -79 7706 7018 1574 199 95 21 chr2 223994186 223994522 -26693332 - MLT1A1 LTR MaLR 0 365 5 349 303 20 46 chr2 223994530 223994725 -26693129 - L1MC/D LINE L1 -2178 5630 5441 315 281 209 7 chr2 223994941 223995094 -26692760 - MIR3 SINE MIR -2 206 23 1780 183 34 29 chr2 223995723 223996072 -26691782 - MSTB LTR MaLR 0 426 76 1805 213 70 25 chr2 223996176 223996651 -26691203 - LTR53 LTR ERVL -2 517 22 592 247 94 1 chr2 223997151 223997343 -26690511 + MER58C DNA MER1_type 9 214 -1 2366 110 0 0 chr2 223997902 223998211 -26689643 + AluSc SINE Alu 1 309 0 183 359 9 47 chr2 223998212 223998318 -26689536 + L3b LINE CR1 1358 1459 -124 355 246 97 131 chr2 223998807 223999128 -26688726 - MLT1H LTR MaLR 0 549 240 2136 93 0 4 chr2 223999194 223999496 -26688358 + AluSc SINE Alu 1 301 0 219 239 106 4 chr2 223999586 223999702 -26688152 - MIR SINE MIR -37 225 50 303 346 29 15 chr2 224000065 224000201 -26687653 + MIR3 SINE MIR 69 206 -2 244 215 38 51 chr2 224001267 224001346 -26686508 - L2 LINE L2 0 3272 3195 2967 224 55 19 chr2 224001701 224002178 -26685676 - L1MC4 LINE L1 -859 7183 6664 288 0 0 0 chr2 224002178 224002210 -26685644 + (CA)n Simple_repeat Simple_repeat 2 33 0 2967 224 55 19 chr2 224002210 224002537 -26685317 - L1MC4 LINE L1 -1378 6664 6350 32 0 0 0 chr2 224003085 224003117 -26684737 + AT_rich Low_complexity Low_complexity 1 32 0 186 43 0 0 chr2 224003933 224003956 -26683898 + (CA)n Simple_repeat Simple_repeat 2 24 0 266 314 14 0 chr2 224003995 224004065 -26683789 - MER81 DNA DNA -42 72 2 1584 170 55 99 chr2 224004936 224005318 -26682536 - MLT1A1 LTR MaLR 0 365 1 3503 151 23 4 chr2 224005499 224006016 -26681838 - MER1A DNA MER1_type 0 527 1 292 257 14 0 chr2 224006236 224006306 -26681548 - MIR SINE MIR -123 139 69 235 217 0 0 chr2 224007377 224007423 -26680431 + (CAAAC)n Simple_repeat Simple_repeat 4 49 0 4498 164 63 8 chr2 224008674 224009457 -26678397 - LTR1B LTR ERV1 0 826 1 243 190 35 17 chr2 224010870 224010928 -26676926 - MLT1I LTR MaLR 0 409 351 219 290 11 11 chr2 224011212 224011305 -26676549 + A-rich Low_complexity Low_complexity 5 97 0 2041 143 0 19 chr2 224012448 224012763 -26675091 + AluSx SINE Alu 1 309 -3 1255 284 103 60 chr2 224013818 224014799 -26673055 + L1MEc LINE L1 872 1930 -4466 2693 166 5 31 chr2 224014799 224015010 -26672844 + Tigger2a DNA MER2_type 1 216 -2492 2517 73 0 0 chr2 224015010 224015310 -26672544 - AluY SINE Alu -11 300 1 2693 166 5 31 chr2 224015310 224015543 -26672311 + Tigger2a DNA MER2_type 216 433 -1 1255 284 103 60 chr2 224015543 224015943 -26671911 + L1MEc LINE L1 1930 2312 -4084 26 50 0 0 chr2 224016180 224016220 -26671634 + AT_rich Low_complexity Low_complexity 1 40 0 304 326 106 25 chr2 224017147 224017350 -26670504 - MIR SINE MIR -15 247 17 2205 106 3 19 chr2 224017620 224017932 -26669922 + AluSp SINE Alu 2 308 -5 268 262 0 16 chr2 224019904 224019965 -26667889 + MIR SINE MIR 15 74 -188 530 291 96 20 chr2 224020047 224020298 -26667556 - MLT2E LTR ERVL -2 626 357 531 290 42 28 chr2 224020368 224020585 -26667269 - MLT2E LTR ERVL -388 240 21 647 289 132 54 chr2 224020596 224021111 -26666743 + MLT1K LTR MaLR 32 586 -2 253 358 64 17 chr2 224021827 224022000 -26665854 + L3b LINE CR1 1272 1452 -131 407 345 95 23 chr2 224022993 224023297 -26664557 + LTR16C LTR ERVL 164 489 -2 434 364 65 53 chr2 224024345 224024763 -26663091 - L3 LINE CR1 -77 1500 1078 225 235 137 29 chr2 224024799 224024901 -26662953 - L3 LINE CR1 -626 951 839 3703 118 31 8 chr2 224025896 224026411 -26661443 - MER1A DNA MER1_type 0 527 1 5190 2 0 0 chr2 224028330 224028892 -26658962 + L1HS LINE L1 5592 6153 -2 294 205 0 0 chr2 224029444 224029527 -26658327 + (TGAA)n Simple_repeat Simple_repeat 3 85 0 728 293 120 50 chr2 224029631 224030096 -26657758 - L2 LINE L2 0 3313 2816 228 272 163 0 chr2 224030133 224030225 -26657629 - MIR SINE MIR 0 262 156 428 182 182 0 chr2 224030666 224030776 -26657078 + MER20 DNA MER1_type 90 219 0 285 253 195 19 chr2 224031123 224031277 -26656577 - L3b LINE CR1 -116 1467 1287 2760 189 111 84 chr2 224032584 224033389 -26654465 + LTR1B LTR ERV1 1 826 0 507 218 16 90 chr2 224034391 224034579 -26653275 - MER69A DNA AcHobo 0 177 4 1766 232 48 30 chr2 224034894 224035356 -26652498 - MLT1E LTR MaLR 0 593 124 499 207 193 20 chr2 224035366 224035516 -26652338 - MLT1E LTR MaLR -416 177 2 998 319 106 8 chr2 224035989 224036610 -26651244 - L1ME3A LINE L1 -225 6181 5500 943 114 0 36 chr2 224036788 224036928 -26650926 + FRAM SINE Alu 38 172 -4 272 229 54 72 chr2 224037016 224037182 -26650672 + L1M4 LINE L1 4524 4686 -1460 182 247 11 0 chr2 224037232 224037325 -26650529 + (TA)n Simple_repeat Simple_repeat 1 94 0 28 71 0 0 chr2 224037356 224037412 -26650442 + AT_rich Low_complexity Low_complexity 1 56 0 188 163 23 0 chr2 224037432 224037475 -26650379 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 418 286 87 31 chr2 224037489 224037811 -26650043 - L1ME3A LINE L1 -2198 4184 3845 448 236 55 111 chr2 224038048 224038617 -26649237 - L1ME3A LINE L1 -2672 3710 3174 327 274 51 45 chr2 224038704 224038828 -26649026 - L1ME3A LINE L1 -3196 3186 3064 2162 112 20 13 chr2 224038828 224039131 -26648723 - AluSx SINE Alu -7 305 1 327 274 51 45 chr2 224039131 224039338 -26648516 - L1ME3A LINE L1 -3318 3064 2853 24 0 0 0 chr2 224039560 224039584 -26648270 + AT_rich Low_complexity Low_complexity 1 24 0 440 284 52 79 chr2 224039716 224039967 -26647887 - L1MEc LINE L1 -3705 2677 2471 1486 181 23 27 chr2 224039967 224040266 -26647588 - AluJo SINE Alu -14 298 1 440 284 52 79 chr2 224040266 224040485 -26647369 - L1MEc LINE L1 -3911 2471 2248 328 278 89 11 chr2 224040747 224040837 -26647017 + MER5B DNA MER1_type 1 97 -81 347 276 76 34 chr2 224040975 224041315 -26646539 - L1M2 LINE L1 -4273 2110 1389 340 107 0 54 chr2 224041348 224041404 -26646450 - MLT2B2 LTR ERVL 0 515 463 * 1929 108 10 30 chr2 224041397 224041692 -26646162 + THE1C LTR MaLR 87 375 0 643 263 116 21 chr2 224041695 224041980 -26645874 - L1MEd LINE L1 -4913 1206 895 186 71 0 0 chr2 224042009 224042037 -26645817 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 616 279 6 27 chr2 224043034 224043217 -26644637 - MIR SINE MIR -50 212 34 1264 178 9 14 chr2 224043425 224043644 -26644210 - MER20 DNA MER1_type 0 219 2 243 339 8 16 chr2 224043987 224044114 -26643740 - MIR SINE MIR -71 191 66 1581 124 0 18 chr2 224044126 224044352 -26643502 - AluSg/x SINE Alu -23 289 68 260 274 55 161 chr2 224044467 224044741 -26643113 - L2 LINE L2 -43 3229 2985 2434 169 15 46 chr2 224044940 224045419 -26642435 - MLT2C2 LTR ERVL 0 464 1 21 0 0 0 chr2 224046939 224046960 -26640894 + AT_rich Low_complexity Low_complexity 1 21 0 464 243 233 9 chr2 224047022 224047232 -26640622 + MIR SINE MIR 6 262 0 3747 135 56 39 chr2 224047262 224047885 -26639969 - MER51A LTR ERV1 0 634 1 291 28 0 0 chr2 224048451 224048487 -26639367 + (CA)n Simple_repeat Simple_repeat 2 37 0 204 97 0 0 chr2 224049059 224049090 -26638764 + (TTG)n Simple_repeat Simple_repeat 2 32 0 1591 162 45 24 chr2 224049444 224049734 -26638120 - AluJo SINE Alu -16 296 1 1300 200 95 49 chr2 224049887 224050317 -26637537 - LTR7 LTR ERV1 0 450 1 228 354 97 21 chr2 224050814 224050958 -26636896 + L3 LINE CR1 1373 1527 -50 204 306 10 20 chr2 224051021 224051119 -26636735 + GA-rich Low_complexity Low_complexity 4 100 0 2372 99 0 10 chr2 224051211 224051524 -26636330 - AluSx SINE Alu -2 310 1 1046 308 42 35 chr2 224052248 224052654 -26635200 - MLT1I LTR MaLR 0 409 1 524 296 49 6 chr2 224054136 224054298 -26633556 - MIR SINE MIR -68 194 26 1054 188 0 96 chr2 224054328 224054568 -26633286 + MER20 DNA MER1_type 1 217 -2 26 30 0 0 chr2 224054937 224054970 -26632884 + AT_rich Low_complexity Low_complexity 1 33 0 383 271 43 29 chr2 224055002 224055142 -26632712 - MIR3 SINE MIR -35 173 32 210 71 0 0 chr2 224055651 224055679 -26632175 + (A)n Simple_repeat Simple_repeat 1 28 0 185 134 45 15 chr2 224056128 224056195 -26631659 + (TA)n Simple_repeat Simple_repeat 1 69 0 2571 151 45 103 chr2 224058022 224058187 -26629667 + L1MA9 LINE L1 5693 5866 -446 194 79 0 26 chr2 224058187 224058225 -26629629 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 899 193 13 0 chr2 224058226 224058376 -26629478 - FRAM SINE Alu -14 152 1 2571 151 45 103 chr2 224058376 224058832 -26629022 + L1MA9 LINE L1 5865 6280 -32 25 31 0 0 chr2 224058832 224058864 -26628990 + AT_rich Low_complexity Low_complexity 1 32 0 1858 158 0 25 chr2 224058914 224059380 -26628474 + AluJo SINE Alu 1 458 0 457 294 52 63 chr2 224059772 224059989 -26627865 + MLT1J LTR MaLR 246 461 -50 2223 120 0 0 chr2 224059989 224060289 -26627565 + AluSq SINE Alu 1 300 -13 457 294 52 63 chr2 224060289 224060340 -26627514 + MLT1J LTR MaLR 461 511 0 205 275 47 109 chr2 224061049 224061242 -26626612 - L2 LINE L2 -274 2998 2818 184 423 6 6 chr2 224061583 224061746 -26626108 - L2 LINE L2 -997 2317 2155 311 244 16 63 chr2 224062086 224062213 -26625641 - L2 LINE L2 0 3313 3193 324 19 57 0 chr2 224062536 224062589 -26625265 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 20222 183 21 9 chr2 224062636 224069356 -26618498 - L1PA13 LINE L1 -1 6813 1 212 179 0 0 chr2 224069445 224069484 -26618370 + (TAA)n Simple_repeat Simple_repeat 1 39 0 517 273 26 102 chr2 224069485 224069607 -26618247 - MIR SINE MIR 0 262 169 2028 141 0 7 chr2 224069607 224069911 -26617943 - AluSx SINE Alu -10 302 1 517 273 26 102 chr2 224069911 224070052 -26617802 - MIR SINE MIR -93 169 19 205 364 121 0 chr2 224070930 224071029 -26616825 - L2 LINE L2 -4 3309 3199 287 303 90 0 chr2 224071835 224071957 -26615897 - L2 LINE L2 -212 3060 2928 463 388 37 7 chr2 224072042 224072341 -26615513 - L2 LINE L2 -518 2796 2489 1654 121 5 0 chr2 224072350 224072574 -26615280 + AluSx SINE Alu 1 225 -87 836 101 0 0 chr2 224072574 224072683 -26615171 + AluSp/q SINE Alu 188 296 -17 343 310 158 16 chr2 224072693 224072772 -26615082 - L2 LINE L2 -836 2478 2412 1678 201 84 9 chr2 224072772 224073116 -26614738 + MLT1A2 LTR MaLR 5 374 0 343 310 158 16 chr2 224073116 224073359 -26614495 - L2 LINE L2 -902 2412 2110 292 286 55 85 chr2 224073614 224073793 -26614061 - MIR SINE MIR -59 149 21 1319 101 0 0 chr2 224074528 224074696 -26613158 + AluY SINE Alu 131 298 -13 566 301 24 14 chr2 224075062 224075271 -26612583 + MLT1K LTR MaLR 306 516 -72 347 145 14 0 chr2 224076144 224076213 -26611641 + (CA)n Simple_repeat Simple_repeat 1 70 0 262 305 0 32 chr2 224079147 224079164 -26608690 + MIR SINE MIR 32 48 -160 192 77 0 0 chr2 224079164 224079190 -26608664 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 262 305 0 32 chr2 224079190 224079267 -26608587 + MIR SINE MIR 48 124 -84 184 115 0 0 chr2 224079258 224079284 -26608570 - MIR3 SINE MIR -34 174 149 * 234 91 0 0 chr2 224079857 224079890 -26607964 + (TC)n Simple_repeat Simple_repeat 1 33 0 368 208 50 42 chr2 224080096 224080216 -26607638 - MIR3 SINE MIR -7 201 81 771 135 0 0 chr2 224081465 224081598 -26606256 + (CAT)n Simple_repeat Simple_repeat 2 134 0 374 287 47 8 chr2 224081612 224081741 -26606113 - MIR SINE MIR -10 252 119 860 181 88 15 chr2 224083010 224083214 -26604640 + MLT1D LTR MaLR 6 224 -281 365 278 122 86 chr2 224083226 224083471 -26604383 + L2 LINE L2 3017 3270 -2 261 294 50 17 chr2 224085270 224085389 -26602465 - MER115 DNA AcHobo -259 434 312 276 330 26 0 chr2 224085496 224085611 -26602243 - MER115 DNA AcHobo -537 156 39 499 285 42 29 chr2 224086228 224086421 -26601433 - MLT1I LTR MaLR -133 276 100 221 286 71 31 chr2 224086620 224086718 -26601136 + L2 LINE L2 3138 3239 -33 296 251 48 116 chr2 224086802 224087009 -26600845 - L2 LINE L2 -913 2401 2209 2125 88 15 0 chr2 224087124 224087398 -26600456 - AluY SINE Alu -13 298 21 459 298 75 26 chr2 224087667 224087895 -26599959 - MIR SINE MIR -16 246 8 1172 194 97 33 chr2 224088249 224088548 -26599306 + MLT1A1 LTR MaLR 48 365 0 278 315 9 19 chr2 224088674 224088782 -26599072 - MIR SINE MIR -109 153 47 391 261 185 38 chr2 224089858 224090069 -26597785 - MIR SINE MIR -1 261 20 284 285 86 93 chr2 224090770 224091072 -26596782 + L2 LINE L2 2971 3270 -2 282 235 20 20 chr2 224091447 224091545 -26596309 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 318 50 0 0 chr2 224091957 224091997 -26595857 + (TG)n Simple_repeat Simple_repeat 2 41 0 576 0 0 0 chr2 224092480 224092544 -26595310 + (TC)n Simple_repeat Simple_repeat 2 65 0 228 86 0 0 chr2 224092552 224092587 -26595267 + (CA)n Simple_repeat Simple_repeat 2 36 0 2323 103 0 7 chr2 224092597 224092907 -26594947 - AluSg SINE Alu 0 310 3 1052 251 179 32 chr2 224093365 224094125 -26593729 - L2 LINE L2 -6 3307 2425 22 0 0 0 chr2 224094573 224094595 -26593259 + AT_rich Low_complexity Low_complexity 1 22 0 990 274 169 9 chr2 224094652 224095083 -26592771 - LTR33A LTR ERVL -21 502 3 7431 49 1 3 chr2 224095131 224096818 -26591036 + L1PA5 LINE L1 4470 6154 0 208 324 130 28 chr2 224096818 224096926 -26590928 - L2 LINE L2 -252 3061 2943 269 319 159 40 chr2 224097670 224097991 -26589863 - L2 LINE L2 -420 2894 2498 2516 150 24 12 chr2 224097991 224098412 -26589442 - MSTB LTR MaLR 0 426 1 269 319 159 40 chr2 224098412 224098563 -26589291 - L2 LINE L2 -816 2498 2366 200 296 0 0 chr2 224099123 224099177 -26588677 + MIR3 SINE MIR 117 170 -38 450 0 0 0 chr2 224099357 224099407 -26588447 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 962 213 59 68 chr2 224100159 224100483 -26587371 + MER33 DNA MER1_type 2 322 -2 2435 124 107 18 chr2 224101585 224102043 -26585811 - L1MC2 LINE L1 0 6344 5846 1151 310 55 5 chr2 224103895 224104276 -26583578 + MLT1K LTR MaLR 20 419 -169 468 179 0 32 chr2 224104317 224104412 -26583442 - MER53 DNA DNA -95 94 3 1883 123 13 69 chr2 224105503 224105821 -26582033 - AluSx SINE Alu -12 300 1 195 162 0 0 chr2 224106340 224106377 -26581477 + (TA)n Simple_repeat Simple_repeat 1 37 0 24 0 0 0 chr2 224106677 224106701 -26581153 + AT_rich Low_complexity Low_complexity 1 24 0 1180 174 34 4 chr2 224106833 224107069 -26580785 - L1MB1 LINE L1 -1 6167 5925 2178 135 76 9 chr2 224107070 224107411 -26580443 - THE1B LTR MaLR 0 364 1 11496 92 27 1 chr2 224107411 224108951 -26578903 - THE1B-int LTR MaLR 0 1580 1 2187 132 76 12 chr2 224108951 224109293 -26578561 - THE1B LTR MaLR 0 364 1 523 246 14 0 chr2 224109330 224109468 -26578386 + LTR37A LTR ERV1 267 406 -20 285 284 121 14 chr2 224111926 224112067 -26575787 - MIR SINE MIR -5 257 102 2264 104 0 3 chr2 224112443 224112769 -26575085 - AluSx SINE Alu 0 312 1 210 159 0 23 chr2 224112782 224112826 -26575028 - MIR SINE MIR -46 216 174 237 227 34 101 chr2 224112833 224112952 -26574902 + MIR SINE MIR 151 261 -1 1742 194 8 70 chr2 224114421 224114823 -26573031 + MLT1B LTR MaLR 4 380 -10 190 353 0 29 chr2 224115528 224115596 -26572258 - L3 LINE CR1 -99 1478 1413 202 295 40 0 chr2 224116108 224116257 -26571597 + GA-rich Low_complexity Low_complexity 5 159 0 * 219 305 53 0 chr2 224116158 224116289 -26571565 + (CAGGG)n Simple_repeat Simple_repeat 4 141 0 2070 91 0 0 chr2 224116714 224116977 -26570877 - AluY SINE Alu -10 301 39 343 295 150 10 chr2 224117010 224117210 -26570644 - MIR SINE MIR -16 246 19 362 216 0 0 chr2 224118040 224118128 -26569726 - MIR SINE MIR 0 262 175 528 288 176 26 chr2 224118193 224118579 -26569275 + LTR33 LTR ERVL 76 519 -2 343 326 45 17 chr2 224118745 224118923 -26568931 - L1MC/D LINE L1 -2052 5756 5574 239 224 2 198 chr2 224118918 224119084 -26568770 + L1ME LINE L1 5573 5711 -451 * 189 0 0 0 chr2 224119085 224119106 -26568748 + (TTTTA)n Simple_repeat Simple_repeat 3 23 0 385 283 14 87 chr2 224119470 224119689 -26568165 - L1MC/D LINE L1 -2216 5592 5390 195 129 0 0 chr2 224120143 224120174 -26567680 + (T)n Simple_repeat Simple_repeat 1 31 0 410 210 220 12 chr2 224120776 224120935 -26566919 - MIR SINE MIR -28 180 15 241 260 27 14 chr2 224121138 224121211 -26566643 - L1MC5 LINE L1 -37 7924 7851 464 259 77 7 chr2 224121494 224121637 -26566217 - MIR SINE MIR 0 262 110 401 284 165 16 chr2 224121648 224121842 -26566012 - MIR SINE MIR -6 256 34 311 219 80 93 chr2 224122923 224123074 -26564780 - MIR SINE MIR -34 228 80 777 211 13 0 chr2 224123360 224123516 -26564338 + MIR SINE MIR 5 162 -100 2680 58 0 0 chr2 224123712 224124020 -26563834 + AluY SINE Alu 1 308 -3 302 368 44 17 chr2 224124401 224124697 -26563157 - L1ME3A LINE L1 -230 5940 5637 2454 67 0 13 chr2 224125127 224125427 -26562427 - AluY SINE Alu 0 311 16 4577 73 11 0 chr2 224125745 224126293 -26561561 - MER41A LTR ERV1 0 554 1 405 320 73 76 chr2 224126408 224126736 -26561118 + L2 LINE L2 2940 3266 -6 243 0 0 0 chr2 224127609 224127636 -26560218 + (TG)n Simple_repeat Simple_repeat 2 28 0 1002 161 19 0 chr2 224128647 224128809 -26559045 - AluSg/x SINE Alu -1 309 145 548 310 42 14 chr2 224130699 224130915 -26556939 + L2 LINE L2 2918 3139 -174 6985 233 60 45 chr2 224130944 224131496 -26556358 + L1ME1 LINE L1 2894 3436 -2730 1997 198 57 41 chr2 224131496 224131915 -26555939 - MSTB LTR MaLR 0 426 1 6985 233 60 45 chr2 224131915 224133477 -26554377 + L1ME1 LINE L1 3436 5065 -1101 728 35 0 0 chr2 224133477 224133562 -26554292 + L1PA3 LINE L1 6071 6155 0 6985 233 60 45 chr2 224133562 224134404 -26553450 + L1ME1 LINE L1 5065 5893 -273 243 325 70 70 chr2 224136861 224137018 -26550836 - MIR3 SINE MIR -12 196 40 1311 197 20 30 chr2 224137147 224137447 -26550407 + AluJo SINE Alu 2 298 -14 285 75 0 0 chr2 224137453 224137493 -26550361 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 187 220 176 33 chr2 224139058 224139149 -26548705 - MIR SINE MIR -70 192 89 349 250 39 10 chr2 224139160 224139264 -26548590 + L2 LINE L2 2750 2856 -458 532 221 160 11 chr2 224139289 224139470 -26548384 - LTR37A LTR ERV1 0 426 219 6086 260 52 11 chr2 224139507 224141440 -26546414 + L1MB8 LINE L1 3220 5231 -915 1756 186 9 68 chr2 224141455 224141884 -26545970 + L1MB8 LINE L1 5773 6176 -2 406 253 66 56 chr2 224141903 224142101 -26545753 - LTR37A LTR ERV1 -208 218 19 383 364 6 12 chr2 224142144 224142306 -26545548 + L2 LINE L2 2898 3058 -255 2205 216 113 4 chr2 224142307 224142812 -26545042 - MLT1F1 LTR MaLR 0 567 8 190 290 137 44 chr2 224142854 224143037 -26544817 + L2 LINE L2 3099 3298 -15 328 321 62 9 chr2 224144710 224144822 -26543032 - MIR3 SINE MIR -9 199 82 271 316 165 37 chr2 224144966 224145396 -26542458 - L2 LINE L2 -824 2490 2006 228 239 0 30 chr2 224145761 224145828 -26542026 + GA-rich Low_complexity Low_complexity 2 66 0 222 196 161 0 chr2 224148101 224148157 -26539697 + MIR SINE MIR 78 142 -66 231 88 0 0 chr2 224149302 224149336 -26538518 + (TC)n Simple_repeat Simple_repeat 2 35 0 186 118 0 0 chr2 224149336 224149370 -26538484 + (CA)n Simple_repeat Simple_repeat 1 34 0 595 86 0 12 chr2 224149403 224149484 -26538370 + MADE1 DNA Mariner 1 80 0 367 264 154 45 chr2 224149562 224149944 -26537910 - HAL1b LINE L1 -6 1342 919 2287 115 0 0 chr2 224152145 224152450 -26535404 + AluSx SINE Alu 1 305 -7 26 0 0 0 chr2 224153095 224153121 -26534733 + AT_rich Low_complexity Low_complexity 1 26 0 706 264 87 22 chr2 224155195 224155439 -26532415 - MLT1L LTR MaLR -7 608 342 2505 149 6 0 chr2 224155439 224155802 -26532052 + MLT1A1 LTR MaLR 1 365 0 706 264 87 22 chr2 224155802 224155834 -26532020 - MLT1L LTR MaLR -273 342 314 322 321 87 72 chr2 224155858 224156123 -26531731 - MLT1L LTR MaLR -345 270 2 357 313 31 16 chr2 224156256 224156384 -26531470 + MIR SINE MIR 2 131 -131 665 283 74 4 chr2 224156399 224156534 -26531320 - MIR SINE MIR 0 262 138 1749 189 0 0 chr2 224156534 224156835 -26531019 + AluJo SINE Alu 1 301 -11 665 283 74 4 chr2 224156835 224156943 -26530911 - MIR SINE MIR -124 138 2 509 124 10 41 chr2 224156974 224157071 -26530783 - LTR9 LTR ERV1 -81 531 438 2168 82 0 117 chr2 224158094 224158446 -26529408 - AluY SINE Alu 0 311 1 2160 154 45 0 chr2 224158501 224158832 -26529022 - MER7A DNA MER2_type 0 346 3 521 320 76 20 chr2 224159113 224159507 -26528347 - HAL1 LINE L1 -824 1683 1268 1641 218 27 35 chr2 224159669 224160073 -26527781 - MLT2D LTR ERVL -12 402 2 228 305 6 42 chr2 224160203 224160370 -26527484 + T-rich Low_complexity Low_complexity 4 164 0 2156 157 14 30 chr2 224160514 224160884 -26526970 - THE1B LTR MaLR 0 364 1 1247 280 179 5 chr2 224161354 224161790 -26526064 - LTR33 LTR ERVL -5 516 5 214 328 109 58 chr2 224161826 224162174 -26525680 + L2 LINE L2 1687 2052 -1262 220 301 48 110 chr2 224164813 224164945 -26522909 - L2 LINE L2 -8 3305 3166 1629 180 0 46 chr2 224164945 224165272 -26522582 + AluJo SINE Alu 1 312 0 220 301 48 110 chr2 224165272 224165356 -26522498 - L2 LINE L2 -147 3166 3078 2279 96 0 0 chr2 224165356 224165649 -26522205 + AluSc SINE Alu 4 296 -13 220 301 48 110 chr2 224165649 224165830 -26522024 - L2 LINE L2 -235 3078 2932 3886 116 18 0 chr2 224165844 224166388 -26521466 - MER41A LTR ERV1 0 554 1 423 78 0 0 chr2 224166584 224166648 -26521206 + (TG)n Simple_repeat Simple_repeat 1 64 0 396 274 146 6 chr2 224166994 224167158 -26520696 + MIR3 SINE MIR 3 189 -19 183 42 0 0 chr2 224167688 224167712 -26520142 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 727 130 0 28 chr2 224167716 224167824 -26520030 - FLAM_C SINE Alu -26 117 13 411 259 43 0 chr2 224168416 224168532 -26519322 + L2 LINE L2 3187 3307 -6 386 326 22 22 chr2 224169356 224169491 -26518363 - L2 LINE L2 -1 3271 3137 241 291 66 66 chr2 224169824 224169975 -26517879 - L2 LINE L2 -437 2877 2727 243 236 9 82 chr2 224171654 224171764 -26516090 + HAL1b LINE L1 748 849 -499 47 44 0 0 chr2 224173892 224173960 -26513894 + AT_rich Low_complexity Low_complexity 1 68 0 307 252 19 39 chr2 224173992 224174095 -26513759 + L1MC4a LINE L1 5833 5933 -1875 369 0 0 0 chr2 224174197 224174238 -26513616 + (CA)n Simple_repeat Simple_repeat 2 42 0 639 71 0 0 chr2 224174327 224174412 -26513442 + (TA)n Simple_repeat Simple_repeat 2 86 0 351 0 0 0 chr2 224174519 224174558 -26513296 + (TG)n Simple_repeat Simple_repeat 2 40 0 2789 106 5 13 chr2 224174559 224174937 -26512917 + THE1C LTR MaLR 1 375 0 328 254 0 0 chr2 224176378 224176449 -26511405 - MIR3 SINE MIR -24 184 114 825 248 128 29 chr2 224176657 224177147 -26510707 - MLT1G3 LTR MaLR 0 555 1 180 231 51 0 chr2 224178463 224178502 -26509352 - L3 LINE CR1 -4 1573 1533 271 202 24 24 chr2 224178694 224178778 -26509076 + (CAGAGA)n Simple_repeat Simple_repeat 6 89 0 212 200 44 0 chr2 224178846 224178936 -26508918 + GA-rich Low_complexity Low_complexity 2 95 0 249 217 14 29 chr2 224179005 224179074 -26508780 + GA-rich Low_complexity Low_complexity 2 69 0 244 219 25 151 chr2 224180320 224180439 -26507415 + MER5A DNA MER1_type 52 155 -34 214 322 11 33 chr2 224180370 224180460 -26507394 - MER5A DNA MER1_type -78 111 24 * 247 325 150 8 chr2 224180504 224180624 -26507230 - MIR SINE MIR -56 152 16 260 109 0 22 chr2 224180715 224180761 -26507093 + (ATG)n Simple_repeat Simple_repeat 1 45 0 515 265 228 6 chr2 224180794 224180956 -26506898 - MIR SINE MIR -21 241 44 756 289 73 56 chr2 224183094 224183505 -26504349 + MLT1J LTR MaLR 1 418 -93 334 222 0 33 chr2 224183558 224183648 -26504206 - MLT1J LTR MaLR -8 503 417 217 235 20 0 chr2 224184362 224184413 -26503441 + GA-rich Low_complexity Low_complexity 2 53 0 288 0 0 0 chr2 224184587 224184619 -26503235 + (TG)n Simple_repeat Simple_repeat 2 33 0 354 275 0 12 chr2 224187488 224187568 -26500286 - MER5A DNA MER1_type -48 141 63 2104 139 0 0 chr2 224187590 224187893 -26499961 - AluSx SINE Alu -9 303 1 21 0 0 0 chr2 224187916 224187937 -26499917 + AT_rich Low_complexity Low_complexity 1 21 0 273 342 53 0 chr2 224189700 224189814 -26498040 + MIR3 SINE MIR 85 204 -4 650 308 56 19 chr2 224190639 224190905 -26496949 - L3 LINE CR1 -4 1573 1298 289 326 11 0 chr2 224191181 224191273 -26496581 + L2 LINE L2 3180 3272 0 288 329 13 27 chr2 224192477 224192626 -26495228 - MIR SINE MIR -70 192 46 854 272 138 34 chr2 224193000 224193471 -26494383 + LTR33A LTR ERVL 4 523 0 891 201 58 16 chr2 224193580 224193769 -26494085 + MER63A DNA MER1_type 1 197 -13 381 304 101 7 chr2 224194142 224194290 -26493564 - MIR3 SINE MIR -8 200 39 420 325 151 34 chr2 224194296 224194647 -26493207 - L2 LINE L2 0 3313 2922 190 278 111 11 chr2 224195599 224195689 -26492165 + MIR SINE MIR 56 154 -108 255 204 43 109 chr2 224197791 224198002 -26489852 - L1M4 LINE L1 -1639 4507 4311 379 304 89 32 chr2 224199761 224199818 -26488036 - MIR3 SINE MIR 0 208 156 519 279 54 66 chr2 224199818 224200151 -26487703 + MER102a DNA MER1_type 2 330 0 379 304 89 32 chr2 224200151 224200251 -26487603 - MIR3 SINE MIR -52 156 42 22 0 0 0 chr2 224200634 224200656 -26487198 + AT_rich Low_complexity Low_complexity 1 22 0 376 280 25 40 chr2 224201795 224202192 -26485662 + L1M4 LINE L1 4915 5305 -841 1211 207 45 125 chr2 224202196 224202828 -26485026 + L1MC/D LINE L1 1508 2065 -4475 415 208 13 0 chr2 224202866 224202943 -26484911 + Tigger3(Golem) DNA MER2_type 3 80 -2949 191 113 65 0 chr2 224203067 224203129 -26484725 + (TA)n Simple_repeat Simple_repeat 1 66 0 536 237 44 7 chr2 224203144 224203279 -26484575 + Tigger3(Golem) DNA MER2_type 2899 3038 0 489 202 107 89 chr2 224203449 224203617 -26484237 - MLT1E3 LTR MaLR -390 234 64 472 184 14 78 chr2 224203521 224203662 -26484192 - MLT2C1 LTR ERVL -265 132 1 * 3106 238 64 54 chr2 224203872 224205410 -26482444 + L1MC/D LINE L1 2391 3911 -2629 777 281 99 11 chr2 224205406 224205861 -26481993 + L1MC/D LINE L1 5698 6192 -2010 * 618 231 186 18 chr2 224207237 224207458 -26480396 - MIR SINE MIR 0 262 5 407 300 31 15 chr2 224207490 224207624 -26480230 - MIR SINE MIR -37 171 34 22 0 0 0 chr2 224207923 224207945 -26479909 + AT_rich Low_complexity Low_complexity 1 22 0 313 385 52 0 chr2 224208259 224208394 -26479460 - MIR3 SINE MIR -18 190 49 535 342 25 12 chr2 224208544 224208787 -26479067 + MIR SINE MIR 14 259 -3 22 0 0 0 chr2 224209654 224209676 -26478178 + AT_rich Low_complexity Low_complexity 1 22 0 1266 87 0 0 chr2 224210364 224210537 -26477317 - L1PA13 LINE L1 0 6163 5991 1770 75 19 30 chr2 224210689 224210955 -26476899 - L1PA13 LINE L1 -178 5990 5728 22 0 0 0 chr2 224212150 224212172 -26475682 + AT_rich Low_complexity Low_complexity 1 22 0 827 169 0 22 chr2 224212193 224212329 -26475525 + FLAM_C SINE Alu 1 133 0 183 42 0 0 chr2 224212352 224212376 -26475478 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 199 316 0 53 chr2 224213445 224213521 -26474333 + MIR SINE MIR 20 91 -171 3357 182 11 65 chr2 224213533 224213839 -26474015 - MER72 LTR ERV1 0 722 401 3522 74 0 8 chr2 224213839 224214310 -26473544 + L1PA8 LINE L1 5704 6170 -2 3357 182 11 65 chr2 224214310 224214767 -26473087 - MER72 LTR ERV1 -321 401 1 274 216 54 14 chr2 224214785 224214859 -26472995 + MIR SINE MIR 131 207 -55 2362 151 55 61 chr2 224215423 224216136 -26471718 + MER51A LTR ERV1 1 634 0 1125 233 58 16 chr2 224216490 224216803 -26471051 + L1M4 LINE L1 403 728 -5814 * 1414 224 39 23 chr2 224216800 224217234 -26470620 + L1MB7 LINE L1 5728 6168 -16 228 100 0 0 chr2 224217259 224217299 -26470555 + (A)n Simple_repeat Simple_repeat 1 40 0 2265 108 0 3 chr2 224217303 224217599 -26470255 + AluSx SINE Alu 2 296 -16 368 303 99 19 chr2 224217729 224217940 -26469914 + LTR33 LTR ERVL 294 521 0 252 330 26 17 chr2 224218506 224218621 -26469233 + L2 LINE L2 2691 2806 -508 260 308 90 0 chr2 224218817 224218895 -26468959 - L2 LINE L2 0 3272 3188 1275 272 65 51 chr2 224219632 224220073 -26467781 - L1MC4 LINE L1 -116 7926 7470 4147 139 28 0 chr2 224220073 224220786 -26467068 - L1MA8 LINE L1 -3 6288 5556 1275 272 65 51 chr2 224220786 224221035 -26466819 - L1MC4 LINE L1 -572 7470 7226 604 259 51 15 chr2 224221144 224221341 -26466513 - L1MC4 LINE L1 -1000 7042 6839 416 323 146 4 chr2 224221377 224221603 -26466251 - L1MC4 LINE L1 -1432 6610 6353 1039 250 98 69 chr2 224221661 224222093 -26465761 - L1MC4a LINE L1 -1543 6265 5847 2287 89 0 0 chr2 224222093 224222374 -26465480 - AluSc SINE Alu -28 281 1 1039 250 98 69 chr2 224222374 224222542 -26465312 - L1MC4a LINE L1 -1961 5847 5685 207 0 0 0 chr2 224222542 224222565 -26465289 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1039 250 98 69 chr2 224222565 224222688 -26465166 - L1MC4a LINE L1 -2123 5685 5520 655 152 0 0 chr2 224222688 224222793 -26465061 + MLT1B LTR MaLR 1 105 -285 549 189 0 0 chr2 224222794 224222900 -26464954 + MLT1B LTR MaLR 285 390 0 497 250 67 12 chr2 224222900 224223064 -26464790 - L1MC4a LINE L1 -2288 5520 5348 990 299 73 63 chr2 224223184 224225154 -26462700 - L1MC4a LINE L1 -987 5159 3211 2699 98 3 13 chr2 224225154 224225533 -26462321 - THE1C LTR MaLR 0 375 1 990 299 73 63 chr2 224225533 224225941 -26461913 - L1MC4a LINE L1 -2935 3211 2739 2160 186 11 11 chr2 224225941 224226302 -26461552 + MLT1A1 LTR MaLR 5 365 0 990 299 73 63 chr2 224226302 224226411 -26461443 - L1MC4a LINE L1 -3407 2739 2633 30 0 0 0 chr2 224226614 224226644 -26461210 + AT_rich Low_complexity Low_complexity 1 30 0 478 273 15 35 chr2 224227240 224227438 -26460416 - HAL1b LINE L1 -938 410 217 186 191 29 15 chr2 224228555 224228623 -26459231 + (TATG)n Simple_repeat Simple_repeat 2 70 0 300 312 135 0 chr2 224228740 224228881 -26458973 + MIR3 SINE MIR 37 196 -12 23 0 0 0 chr2 224229315 224229338 -26458516 + AT_rich Low_complexity Low_complexity 1 23 0 676 197 4 9 chr2 224229878 224230121 -26457733 + (CA)n Simple_repeat Simple_repeat 1 241 0 261 196 0 0 chr2 224230122 224230173 -26457681 - MER4-int LTR ERV1 -5437 1161 1111 246 156 0 0 chr2 224230173 224230218 -26457636 + (CA)n Simple_repeat Simple_repeat 2 46 0 2436 87 0 10 chr2 224230884 224231195 -26456659 - AluSg SINE Alu -2 308 1 490 295 46 6 chr2 224231733 224231906 -26455948 + MIR SINE MIR 83 262 0 21 0 0 0 chr2 224231914 224231935 -26455919 + AT_rich Low_complexity Low_complexity 1 21 0 499 335 6 0 chr2 224232183 224232341 -26455513 + MIR3 SINE MIR 30 188 -20 877 102 24 0 chr2 224233405 224233532 -26454322 - L1MA6 LINE L1 0 6300 6171 4084 151 24 6 chr2 224233532 224233728 -26454126 + L1 LINE L1 4289 4480 -1666 2496 77 0 3 chr2 224233728 224234040 -26453814 + AluY SINE Alu 1 311 0 4084 151 24 6 chr2 224234040 224234564 -26453290 + L1 LINE L1 4480 5022 -1124 224 239 15 60 chr2 224235348 224235383 -26452471 + L3 LINE CR1 1494 1526 -51 1201 160 42 14 chr2 224235383 224235596 -26452258 + MER20 DNA MER1_type 1 219 0 224 239 15 60 chr2 224235596 224235627 -26452227 + L3 LINE CR1 1526 1557 -20 25 51 0 0 chr2 224236293 224236332 -26451522 + AT_rich Low_complexity Low_complexity 1 39 0 2306 106 0 0 chr2 224236567 224236860 -26450994 - AluSc SINE Alu -16 293 1 26 0 0 0 chr2 224237306 224237332 -26450522 + AT_rich Low_complexity Low_complexity 1 26 0 223 139 19 93 chr2 224237360 224237468 -26450386 + (TTAAA)n Simple_repeat Simple_repeat 1 100 0 2657 147 51 5 chr2 224238685 224239094 -26448760 - MSTC LTR MaLR 0 428 1 501 227 28 50 chr2 224239367 224239508 -26448346 - MIR SINE MIR -108 154 17 342 288 141 18 chr2 224239527 224239697 -26448157 - MIR SINE MIR -38 224 34 25 31 0 0 chr2 224239723 224239755 -26448099 + AT_rich Low_complexity Low_complexity 1 32 0 251 345 42 25 chr2 224239840 224239959 -26447895 - MIR SINE MIR -85 177 57 957 171 78 16 chr2 224239970 224240163 -26447691 - MER3 DNA MER1_type -4 205 1 456 163 0 0 chr2 224240182 224240262 -26447592 + MER5A DNA MER1_type 30 109 -80 407 267 25 33 chr2 224240324 224240444 -26447410 - MIR SINE MIR -61 147 29 852 273 54 16 chr2 224241011 224241322 -26446532 + MLT1G LTR MaLR 10 349 -206 2264 87 0 19 chr2 224241327 224241636 -26446218 + AluY SINE Alu 1 303 -8 2271 42 4 8 chr2 224241637 224241900 -26445954 + L1PA8 LINE L1 5905 6166 -6 637 216 53 47 chr2 224242007 224242197 -26445657 + MLT1G LTR MaLR 392 582 -8 298 345 84 0 chr2 224242275 224242394 -26445460 + MIR SINE MIR 16 144 -118 362 291 92 7 chr2 224243983 224244124 -26443730 + MIR SINE MIR 104 256 -6 2517 64 3 16 chr2 224245507 224245818 -26442036 - AluY SINE Alu -4 307 1 233 285 152 36 chr2 224246335 224246500 -26441354 + MIR SINE MIR 20 203 -59 236 30 30 0 chr2 224246948 224246981 -26440873 + (CAA)n Simple_repeat Simple_repeat 2 35 0 250 243 27 14 chr2 224247196 224247270 -26440584 - MLT1J2 LTR MaLR -297 153 79 2592 107 27 33 chr2 224249487 224249853 -26438001 + THE1B LTR MaLR 1 364 0 200 329 13 0 chr2 224249934 224250010 -26437844 - MIR SINE MIR -12 250 174 2036 167 71 0 chr2 224250941 224251264 -26436590 - MER7A DNA MER2_type 0 346 3 383 269 67 8 chr2 224251469 224251588 -26436266 - MIR SINE MIR -116 146 21 362 278 78 63 chr2 224251549 224251804 -26436050 + L2 LINE L2 2700 2958 -356 * 415 215 0 0 chr2 224252047 224252126 -26435728 + L2 LINE L2 3235 3313 0 367 314 86 41 chr2 224252539 224252784 -26435070 + L3b LINE CR1 1241 1496 -87 208 250 157 57 chr2 224253323 224253463 -26434391 + MIR SINE MIR 91 244 -18 574 315 17 6 chr2 224254660 224254838 -26433016 + MER5A DNA MER1_type 6 185 -4 2133 133 0 0 chr2 224255204 224255498 -26432356 - AluSx SINE Alu -18 294 1 240 368 17 17 chr2 224255503 224255620 -26432234 + L2 LINE L2 3156 3272 0 2370 99 0 6 chr2 224256908 224257220 -26430634 - AluSg SINE Alu 0 310 1 3057 162 177 124 chr2 224257709 224258075 -26429779 + L1MD3 LINE L1 6895 7240 -755 404 264 24 32 chr2 224258075 224258200 -26429654 + MLT1F1 LTR MaLR 1 124 -443 3057 162 177 124 chr2 224258200 224258742 -26429112 + L1MD3 LINE L1 7240 7982 -13 201 257 86 29 chr2 224259060 224259165 -26428689 - L2 LINE L2 -62 3251 3141 302 334 6 27 chr2 224259203 224259376 -26428478 - MIR SINE MIR -60 202 37 1946 137 105 23 chr2 224259477 224259642 -26428212 - THE1C LTR MaLR -4 371 221 195 42 0 0 chr2 224259642 224259666 -26428188 + (GA)n Simple_repeat Simple_repeat 1 24 0 1946 137 105 23 chr2 224259666 224259843 -26428011 - THE1C LTR MaLR -154 221 1 1334 106 42 55 chr2 224259843 224259925 -26427929 - THE1C-int LTR MaLR 0 1651 1569 1811 136 0 4 chr2 224259925 224260182 -26427672 - AluSx SINE Alu -7 305 50 1334 106 42 55 chr2 224260182 224260336 -26427518 - THE1C-int LTR MaLR -82 1569 1418 * 3119 155 0 2 chr2 224260323 224260832 -26427022 - THE1C-int LTR MaLR -1143 508 1 2059 119 80 44 chr2 224260832 224261194 -26426660 - THE1C LTR MaLR 0 375 1 331 206 29 0 chr2 224261194 224261262 -26426592 - L1ME1 LINE L1 -51 6115 6046 * 4809 270 55 29 chr2 224261254 224263170 -26424684 + L1ME1 LINE L1 25 1991 -4405 661 194 49 75 chr2 224263174 224263397 -26424457 - MER20 DNA MER1_type 0 219 2 1531 235 54 0 chr2 224263397 224263839 -26424015 + L1ME1 LINE L1 1989 2454 -3942 1666 298 74 19 chr2 224263864 224264918 -26422936 + L1ME1 LINE L1 2629 3740 -2475 2020 205 37 33 chr2 224264927 224265445 -26422409 + L1ME1 LINE L1 4103 4622 -1593 1222 212 57 69 chr2 224265447 224265808 -26422046 + MLT2B1 LTR ERVL 1 463 -57 576 42 0 0 chr2 224265808 224265879 -26421975 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 1222 212 57 69 chr2 224265879 224265896 -26421958 + MLT2B1 LTR ERVL 463 479 -41 552 161 48 6 chr2 224265901 224266069 -26421785 + (TA)n Simple_repeat Simple_repeat 1 175 0 316 106 21 0 chr2 224266084 224266131 -26421723 + MLT2C1 LTR ERVL 350 397 0 3043 208 50 15 chr2 224266131 224267454 -26420400 + L1ME1 LINE L1 4620 5990 -245 2118 106 3 3 chr2 224267466 224267759 -26420095 + AluSx SINE Alu 12 304 -8 1384 77 0 0 chr2 224267759 224267928 -26419926 + AluSg/x SINE Alu 134 302 -10 785 233 28 43 chr2 224267928 224268181 -26419673 + L1ME1 LINE L1 5979 6227 -8 531 314 53 100 chr2 224269074 224269415 -26418439 - L2 LINE L2 0 3272 2948 476 270 90 54 chr2 224270163 224270385 -26417469 - MIR SINE MIR -13 249 20 462 159 0 0 chr2 224270779 224270867 -26416987 + CT-rich Low_complexity Low_complexity 2 89 0 278 354 24 8 chr2 224271446 224271573 -26416281 + MIR SINE MIR 19 147 -61 1659 199 91 3 chr2 224271605 224271936 -26415918 - MER46B DNA MER2_type 0 236 2 180 0 0 0 chr2 224272290 224272310 -26415544 + (CAGG)n Simple_repeat Simple_repeat 2 21 0 184 333 105 47 chr2 224273120 224273291 -26414563 + MIR3 SINE MIR 1 181 -27 438 325 147 25 chr2 224273649 224273812 -26414042 - MER91A DNA MER1_type 0 196 14 825 276 63 28 chr2 224273896 224274144 -26413710 - LTR16A LTR ERVL -14 436 175 5654 148 44 5 chr2 224274144 224275010 -26412844 - MER54A LTR ERVL -1 900 1 825 276 63 28 chr2 224275010 224275047 -26412807 - LTR16A LTR ERVL -275 175 141 1222 259 41 59 chr2 224275191 224275681 -26412173 + LTR33 LTR ERVL 1 481 -40 430 224 40 24 chr2 224275700 224275825 -26412029 - MIR SINE MIR -49 213 87 274 345 17 17 chr2 224276175 224276294 -26411560 + MIR3 SINE MIR 62 180 -28 600 96 15 126 chr2 224276537 224276672 -26411182 + L1PA12 LINE L1 6046 6165 -3 29 0 0 0 chr2 224276655 224276684 -26411170 + AT_rich Low_complexity Low_complexity 1 29 0 421 279 149 7 chr2 224277025 224277179 -26410675 + MIR3 SINE MIR 30 205 -3 244 324 95 28 chr2 224277228 224277407 -26410447 - LTR16C LTR ERVL -10 481 291 2870 89 15 103 chr2 224277613 224278070 -26409784 + MER4E LTR ERV1 1 569 -197 4580 161 50 75 chr2 224278070 224279169 -26408685 + MER11C LTR ERVK 1 1071 0 2870 89 15 103 chr2 224279169 224279350 -26408504 + MER4E LTR ERV1 569 764 -2 323 258 75 82 chr2 224280647 224280806 -26407048 - MIR SINE MIR -15 247 90 2143 116 0 0 chr2 224281128 224281442 -26406412 + AluSx SINE Alu 1 314 0 356 258 28 90 chr2 224281690 224281868 -26405986 + MIR3 SINE MIR 40 206 -2 186 71 0 0 chr2 224281907 224281935 -26405919 + (A)n Simple_repeat Simple_repeat 1 28 0 2594 99 36 74 chr2 224282769 224282814 -26405040 - MSTA LTR MaLR 0 428 383 2129 92 0 34 chr2 224282814 224283144 -26404710 + AluSc SINE Alu 1 320 0 2594 99 36 74 chr2 224283144 224283542 -26404312 - MSTA LTR MaLR -45 383 1 225 235 0 26 chr2 224283733 224283848 -26404006 + GA-rich Low_complexity Low_complexity 3 114 0 219 320 39 29 chr2 224286262 224286365 -26401489 + MIR SINE MIR 50 153 -109 302 341 29 18 chr2 224287389 224287559 -26400295 - L2 LINE L2 -183 3089 2918 248 220 0 0 chr2 224288283 224288342 -26399512 + CT-rich Low_complexity Low_complexity 2 60 0 201 121 0 0 chr2 224288342 224288375 -26399479 + (CA)n Simple_repeat Simple_repeat 1 33 0 344 262 241 11 chr2 224288975 224289166 -26398688 - MIR SINE MIR 0 262 28 349 182 34 0 chr2 224291643 224291731 -26396123 - L1MB4 LINE L1 -1 6179 6089 408 163 38 0 chr2 224291819 224291899 -26395955 + L1MA5A LINE L1 5016 5098 -1048 3523 142 97 5 chr2 224292063 224292858 -26394996 + L1MA5A LINE L1 5097 5962 -335 868 152 36 0 chr2 224293643 224293808 -26394046 + L1MA5A LINE L1 6117 6287 -10 23 33 0 0 chr2 224293811 224293841 -26394013 + AT_rich Low_complexity Low_complexity 1 30 0 4604 168 117 102 chr2 224293876 224294654 -26393200 + L1MC3 LINE L1 6323 7222 -563 304 256 22 11 chr2 224294654 224294744 -26393110 + MLT1K LTR MaLR 35 125 -442 4604 168 117 102 chr2 224294744 224295315 -26392539 + L1MC3 LINE L1 7222 7783 -2 637 319 28 12 chr2 224295974 224296225 -26391629 + MIR SINE MIR 7 261 -1 193 264 0 14 chr2 224296232 224296304 -26391550 - L2 LINE L2 -56 3257 3187 21 36 0 0 chr2 224296670 224296698 -26391156 + AT_rich Low_complexity Low_complexity 1 28 0 253 343 61 0 chr2 224297136 224297235 -26390619 + L2 LINE L2 3192 3296 -17 997 236 52 0 chr2 224297348 224297577 -26390277 - MIR SINE MIR -19 243 3 354 339 34 0 chr2 224297592 224297710 -26390144 + MLT1K LTR MaLR 125 246 -342 2506 97 10 56 chr2 224298147 224298540 -26389314 - THE1C LTR MaLR 0 375 1 285 329 32 51 chr2 224298686 224298902 -26388952 - L2 LINE L2 -433 2881 2670 444 319 24 18 chr2 224298994 224299163 -26388691 - MIR3 SINE MIR -3 205 36 2090 179 8 3 chr2 224299946 224300309 -26387545 + MLT1A1 LTR MaLR 1 365 0 1183 234 77 59 chr2 224300669 224301113 -26386741 + L1MD2 LINE L1 5895 6346 -13 814 216 95 53 chr2 224301118 224301455 -26386399 + L1MC5 LINE L1 7517 7873 -88 2260 121 0 0 chr2 224301455 224301760 -26386094 - AluSg SINE Alu -5 305 1 814 216 95 53 chr2 224301760 224301801 -26386053 + L1MC5 LINE L1 7873 7911 -50 264 269 51 0 chr2 224302381 224302459 -26385395 - MIR SINE MIR -70 192 111 332 227 209 9 chr2 224304009 224304119 -26383735 + LTR33 LTR ERVL 28 159 -362 321 279 36 42 chr2 224304215 224304380 -26383474 + LTR33 LTR ERVL 301 464 -57 515 301 62 25 chr2 224304427 224304749 -26383105 + L2 LINE L2 2873 3206 -107 1235 212 60 6 chr2 224305623 224306051 -26381803 - L1ME LINE L1 -682 5744 5300 3976 213 75 47 chr2 224306063 224306727 -26381127 - L1MDb LINE L1 -3313 3093 2449 201 39 0 0 chr2 224306727 224306753 -26381101 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3976 213 75 47 chr2 224306753 224306860 -26380994 - L1MDb LINE L1 -3957 2449 2346 189 94 0 0 chr2 224306860 224306892 -26380962 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3976 213 75 47 chr2 224306892 224308324 -26379530 - L1MDb LINE L1 -4060 2346 775 22 0 0 0 chr2 224308546 224308568 -26379286 + AT_rich Low_complexity Low_complexity 1 22 0 2746 52 0 0 chr2 224308574 224308900 -26378954 - LTR17 LTR ERV1 -454 326 1 2313 89 0 0 chr2 224308900 224309192 -26378662 - HERV17 LTR ERV1 0 8626 8335 281 77 0 0 chr2 224309182 224309221 -26378633 - HERV17 LTR ERV1 -1078 7548 7510 * 10600 57 2 2 chr2 224309214 224310494 -26377360 - HERV17 LTR ERV1 -2607 6019 4741 1106 123 0 0 chr2 224310494 224310648 -26377206 + AluSg/x SINE Alu 147 300 -10 403 264 96 29 chr2 224310901 224311140 -26376714 - MIR SINE MIR 0 262 8 1053 197 23 0 chr2 224312493 224312711 -26375143 - MIR SINE MIR -10 252 30 180 364 12 29 chr2 224313904 224314077 -26373777 + L2 LINE L2 2903 3072 -200 1384 186 0 0 chr2 224314109 224314345 -26373509 - MER46A DNA MER2_type 0 236 1 674 272 29 17 chr2 224314583 224314822 -26373032 + MIR SINE MIR 21 262 0 305 346 45 13 chr2 224315106 224315262 -26372592 - MER5A DNA MER1_type -28 161 1 1065 266 98 38 chr2 224315991 224316439 -26371415 + LTR33 LTR ERVL 20 494 -27 1271 250 48 15 chr2 224316549 224316881 -26370973 + LTR16C LTR ERVL 149 491 0 430 322 45 20 chr2 224316917 224317119 -26370735 - MIR SINE MIR -8 254 48 823 258 163 12 chr2 224318957 224319294 -26368560 + LTR33A LTR ERVL 136 523 0 352 306 42 7 chr2 224319999 224320143 -26367711 - MIR3 SINE MIR -24 184 36 486 285 63 52 chr2 224320293 224320563 -26367291 - L2 LINE L2 0 3313 3041 382 304 7 27 chr2 224320559 224320707 -26367147 + MIR SINE MIR 118 262 0 * 577 286 62 5 chr2 224320764 224320956 -26366898 + MIR SINE MIR 53 255 -7 445 301 24 0 chr2 224320963 224321086 -26366768 + L2 LINE L2 3188 3313 0 * 658 282 68 18 chr2 224321084 224321113 -26366741 - MIR SINE MIR -17 245 219 1393 309 50 6 chr2 224321113 224321612 -26366242 - LTR33 LTR ERVL 0 521 1 658 282 68 18 chr2 224321612 224321802 -26366052 - MIR SINE MIR -43 219 15 183 313 30 0 chr2 224322938 224323005 -26364849 - MIR3 SINE MIR -39 169 101 264 278 17 61 chr2 224323608 224323723 -26364131 + MIR SINE MIR 21 130 -78 871 247 48 4 chr2 224323909 224324136 -26363718 + MIR SINE MIR 24 260 -2 241 356 94 6 chr2 224324499 224324659 -26363195 + MIR3 SINE MIR 17 190 -18 301 326 21 11 chr2 224325020 224325115 -26362739 + MER5A DNA MER1_type 63 158 -31 248 250 261 34 chr2 224325348 224325524 -26362330 + MIR SINE MIR 26 241 -21 181 263 0 0 chr2 224325490 224325528 -26362326 + L2 LINE L2 3212 3249 -23 * 303 261 42 49 chr2 224326044 224326186 -26361668 + L2 LINE L2 2981 3121 -192 404 318 164 19 chr2 224326203 224326562 -26361292 + LTR16B LTR ERVL 1 411 -53 349 226 36 25 chr2 224326777 224326924 -26360930 - MIR SINE MIR -63 145 3 411 21 0 0 chr2 224327000 224327048 -26360806 + (TG)n Simple_repeat Simple_repeat 1 48 0 198 314 81 0 chr2 224327247 224327333 -26360521 + MIR SINE MIR 34 126 -82 316 234 126 120 chr2 224328690 224328857 -26358997 + MIR3 SINE MIR 36 203 -5 420 271 31 8 chr2 224329751 224329880 -26357974 - L3 LINE CR1 -100 1477 1346 258 255 312 28 chr2 224331216 224331357 -26356497 + MLT1K LTR MaLR 71 251 -337 1200 95 0 0 chr2 224331492 224331672 -26356182 + AluY SINE Alu 130 309 0 353 345 0 0 chr2 224332196 224332306 -26355548 - MIR3 SINE MIR -11 197 88 203 320 39 0 chr2 224332391 224332469 -26355385 + MIR SINE MIR 45 125 -83 246 314 23 12 chr2 224332913 224332999 -26354855 + MLT1K LTR MaLR 156 242 -346 225 274 69 29 chr2 224333201 224333303 -26354551 + MLT1L LTR MaLR 503 608 -7 1751 187 17 69 chr2 224334329 224334747 -26353107 - MSTD LTR MaLR 0 396 1 633 14 0 0 chr2 224335068 224335142 -26352712 + (TC)n Simple_repeat Simple_repeat 1 74 0 252 0 0 0 chr2 224335584 224335612 -26352242 + (A)n Simple_repeat Simple_repeat 1 28 0 300 176 14 54 chr2 224335775 224335849 -26352005 - L2 LINE L2 0 3272 3202 195 211 0 0 chr2 224336248 224336286 -26351568 - L2 LINE L2 -2 3311 3274 189 0 0 0 chr2 224336439 224336460 -26351394 + (CCTAG)n Simple_repeat Simple_repeat 1 21 0 182 239 274 51 chr2 224336959 224337076 -26350778 - MIR SINE MIR 0 262 120 402 279 0 0 chr2 224337150 224337229 -26350625 - MIR SINE MIR -143 119 41 701 230 0 19 chr2 224337786 224337947 -26349907 - MER103 DNA DNA -7 159 2 481 269 109 31 chr2 224338818 224339011 -26348843 + MIR SINE MIR 51 258 -4 1897 220 12 10 chr2 224341285 224341657 -26346197 + MLT2D LTR ERVL 1 376 -38 333 0 0 0 chr2 224341657 224341694 -26346160 + (CA)n Simple_repeat Simple_repeat 2 38 0 1897 220 12 10 chr2 224341694 224341734 -26346120 + MLT2D LTR ERVL 376 414 0 1926 134 3 34 chr2 224342340 224342660 -26345194 - AluSx SINE Alu -2 310 1 474 326 11 39 chr2 224342744 224342922 -26344932 + MIR3 SINE MIR 34 206 -2 411 302 82 37 chr2 224343545 224343790 -26344064 + L2 LINE L2 3050 3305 -8 188 227 61 76 chr2 224343864 224343930 -26343924 + L3b LINE CR1 1290 1354 -229 438 294 59 15 chr2 224343960 224344096 -26343758 + MIR3 SINE MIR 19 160 -48 1735 154 7 10 chr2 224344380 224344673 -26343181 + AluJb SINE Alu 1 292 -20 925 279 78 16 chr2 224344746 224345054 -26342800 + MLT1J2 LTR MaLR 5 331 -119 233 322 46 11 chr2 224346202 224346289 -26341565 + MIR SINE MIR 26 115 -147 206 260 0 0 chr2 224346540 224346590 -26341264 + T-rich Low_complexity Low_complexity 1 50 0 317 226 95 51 chr2 224348167 224348304 -26339550 + MER103 DNA DNA 11 153 -13 428 358 0 7 chr2 224349122 224349259 -26338595 - MIR3 SINE MIR -16 192 57 24 32 0 0 chr2 224353051 224353082 -26334772 + AT_rich Low_complexity Low_complexity 1 31 0 227 79 26 0 chr2 224353085 224353123 -26334731 + (TA)n Simple_repeat Simple_repeat 1 39 0 199 283 22 0 chr2 224353433 224353479 -26334375 - L2 LINE L2 -21 3251 3205 21 36 0 0 chr2 224353531 224353559 -26334295 + AT_rich Low_complexity Low_complexity 1 28 0 294 299 158 23 chr2 224354415 224354592 -26333262 - MIR SINE MIR -19 243 43 * 319 235 49 20 chr2 224354581 224354683 -26333171 - MIR SINE MIR -69 193 89 258 216 47 30 chr2 224355121 224355188 -26332666 - MIR SINE MIR -61 147 79 450 256 64 13 chr2 224355572 224355728 -26332126 - LTR16A LTR ERVL 0 450 287 511 107 36 0 chr2 224355764 224355848 -26332006 + MER53 DNA DNA 8 94 -95 1100 172 95 5 chr2 224355948 224356169 -26331685 - MER2 DNA MER2_type 0 345 105 1735 157 20 17 chr2 224356273 224356573 -26331281 + MER7A DNA MER2_type 47 345 -1 438 43 43 0 chr2 224356574 224356643 -26331211 + (TG)n Simple_repeat Simple_repeat 2 73 0 183 295 72 93 chr2 224358199 224358338 -26329516 - L2 LINE L2 0 3272 3137 249 253 12 60 chr2 224358909 224358992 -26328862 + L2 LINE L2 3143 3221 -51 1579 239 69 34 chr2 224359077 224359555 -26328299 - MLT1D LTR MaLR -2 503 9 1057 270 111 3 chr2 224359813 224360017 -26327837 + LTR16C LTR ERVL 111 292 -199 530 234 18 0 chr2 224360017 224360128 -26327726 - MER81 DNA DNA -1 113 1 1057 270 111 3 chr2 224360128 224360267 -26327587 + LTR16C LTR ERVL 292 491 0 377 250 83 23 chr2 224360297 224360429 -26327425 - MER91C DNA MER1_type 0 140 1 2496 239 54 38 chr2 224361396 224362081 -26325773 + MER69 DNA AcHobo 10 705 -1821 864 197 101 84 chr2 224362091 224362189 -26325665 + MER69 DNA AcHobo 1650 1745 -781 697 258 0 13 chr2 224362189 224362340 -26325514 + FRAM SINE Alu 3 151 -15 864 197 101 84 chr2 224362340 224362586 -26325268 + MER69 DNA AcHobo 1745 2000 -526 985 125 16 81 chr2 224362586 224362626 -26325228 + L1M3 LINE L1 5288 5329 -851 1941 121 27 0 chr2 224362626 224362923 -26324931 + L1PA15 LINE L1 5861 6165 0 985 125 16 81 chr2 224362923 224363140 -26324714 + L1M3 LINE L1 5329 5482 -698 445 184 18 0 chr2 224363140 224363249 -26324605 + GA-rich Low_complexity Low_complexity 1 111 0 447 135 62 10 chr2 224363277 224363373 -26324481 + L1M3 LINE L1 5475 5575 -596 466 165 0 0 chr2 224363479 224363564 -26324290 + L1MA10 LINE L1 6249 6333 -1 265 307 0 0 chr2 224364255 224364330 -26323524 - MIR SINE MIR -112 150 76 884 298 8 19 chr2 224365723 224365981 -26321873 + MIR SINE MIR 8 262 0 213 244 0 0 chr2 224366183 224366224 -26321630 - MIR SINE MIR -109 153 113 215 246 33 16 chr2 224367575 224367636 -26320218 + MER5A DNA MER1_type 128 189 0 778 138 9 0 chr2 224367775 224367891 -26319963 - MLT1A1 LTR MaLR -2 363 247 243 207 0 35 chr2 224367891 224367949 -26319905 - MLT1A1 LTR MaLR -298 76 21 2610 226 63 12 chr2 224368012 224368618 -26319236 + MER45B DNA AcHobo 6 642 -398 1956 137 7 0 chr2 224368618 224368917 -26318937 + AluSx SINE Alu 1 301 -11 623 264 66 25 chr2 224368969 224369166 -26318688 + MER45B DNA AcHobo 6 210 -830 1476 149 141 9 chr2 224369171 224369519 -26318335 + MER45B DNA AcHobo 647 1040 0 826 221 28 66 chr2 224369658 224369822 -26318032 - MER63A DNA MER1_type -1478 210 54 2186 108 0 10 chr2 224369822 224370127 -26317727 - AluSq SINE Alu -11 302 1 826 221 28 66 chr2 224370127 224370175 -26317679 - MER63A DNA MER1_type -1634 54 6 277 194 208 14 chr2 224370185 224370257 -26317597 - MIR3 SINE MIR -39 169 84 2124 95 9 31 chr2 224371128 224371445 -26316409 - AluSx SINE Alu -2 310 1 2792 131 14 0 chr2 224371563 224371983 -26315871 + MSTA LTR MaLR 3 428 0 1476 152 61 88 chr2 224372220 224372549 -26315305 - MLT1B LTR MaLR -70 320 1 981 255 133 6 chr2 224373741 224374132 -26313722 + LTR33A LTR ERVL 101 521 -2 455 249 154 73 chr2 224374134 224374516 -26313338 - MLT1K LTR MaLR -25 563 151 925 123 7 7 chr2 224375612 224375750 -26312104 - THE1C LTR MaLR 0 375 238 384 357 6 22 chr2 224375933 224376115 -26311739 + G-rich Low_complexity Low_complexity 1 179 0 * 420 340 14 11 chr2 224375988 224376202 -26311652 + GA-rich Low_complexity Low_complexity 1 214 0 1988 153 17 17 chr2 224376377 224376724 -26311130 - THE1C LTR MaLR -28 347 1 1781 163 80 16 chr2 224376724 224377034 -26310820 - MER1B DNA MER1_type -9 330 1 1266 234 82 42 chr2 224377034 224377688 -26310166 + L2 LINE L2 2626 3313 0 357 376 0 8 chr2 224377999 224378132 -26309722 - MIR3 SINE MIR -11 197 66 395 306 46 0 chr2 224378359 224378467 -26309387 + L2 LINE L2 3155 3267 -5 531 312 121 25 chr2 224379070 224379312 -26308542 + MER115 DNA AcHobo 1 218 -475 387 0 0 0 chr2 224379312 224379355 -26308499 + (CA)n Simple_repeat Simple_repeat 1 43 0 531 312 121 25 chr2 224379355 224379590 -26308264 + MER115 DNA AcHobo 218 550 -143 310 238 66 127 chr2 224379650 224379831 -26308023 + MER115 DNA AcHobo 521 690 -3 893 193 91 53 chr2 224380331 224380596 -26307258 - ORSL DNA AcHobo 0 275 1 398 264 124 8 chr2 224380804 224380933 -26306921 + MIR SINE MIR 8 151 -111 210 287 58 81 chr2 224382247 224382421 -26305433 - MIR3 SINE MIR -9 199 30 223 264 123 0 chr2 224383282 224383388 -26304466 + L2 LINE L2 3188 3306 -7 23 33 0 0 chr2 224383720 224383750 -26304104 + AT_rich Low_complexity Low_complexity 1 30 0 2705 173 8 8 chr2 224383759 224384257 -26303597 - L1MB3 LINE L1 -4 6179 5682 626 268 57 5 chr2 224384491 224384700 -26303154 - MIR SINE MIR -19 243 25 193 294 47 47 chr2 224385580 224385665 -26302189 + MIR3 SINE MIR 84 168 -40 341 296 91 0 chr2 224386077 224386209 -26301645 - MIR SINE MIR -70 192 49 2456 185 99 17 chr2 224386879 224387403 -26300451 - MLT1F1 LTR MaLR 0 567 1 934 129 0 0 chr2 224387627 224387751 -26300103 + FLAM_C SINE Alu 1 124 -19 24 0 0 0 chr2 224387752 224387776 -26300078 + AT_rich Low_complexity Low_complexity 1 24 0 522 169 141 7 chr2 224387811 224387953 -26299901 + MIR SINE MIR 98 258 -4 466 310 100 59 chr2 224387990 224388634 -26299220 + L2 LINE L2 2582 3270 -2 193 324 44 0 chr2 224389143 224389211 -26298643 + MIR SINE MIR 47 117 -91 442 264 16 16 chr2 224390272 224390401 -26297453 - L2 LINE L2 0 3313 3185 819 224 12 0 chr2 224391877 224392038 -26295816 + FRAM SINE Alu 11 173 -3 892 157 6 6 chr2 224392048 224392210 -26295644 + GA-rich Low_complexity Low_complexity 1 165 -7 180 0 0 0 chr2 224392210 224392230 -26295624 + (TAG)n Simple_repeat Simple_repeat 2 21 0 2661 43 7 0 chr2 224392267 224392570 -26295284 - AluY SINE Alu -6 305 1 354 212 23 76 chr2 224393352 224393484 -26294370 - MER103 DNA DNA -1 165 41 227 224 9 0 chr2 224393747 224393854 -26294000 + GA-rich Low_complexity Low_complexity 2 109 0 298 146 27 82 chr2 224393872 224394178 -26293676 + (CAGAGA)n Simple_repeat Simple_repeat 1 289 0 277 204 0 0 chr2 224395228 224395282 -26292572 + MIR SINE MIR 30 83 -179 215 208 38 0 chr2 224395344 224395397 -26292457 - MIR SINE MIR -90 172 118 869 160 12 65 chr2 224396211 224396380 -26291474 - MER2 DNA MER2_type -185 160 1 446 267 118 5 chr2 224396380 224396567 -26291287 + L1MC4 LINE L1 6481 6688 -1354 1652 208 35 27 chr2 224396574 224396940 -26290914 + MLT1A2 LTR MaLR 4 372 -2 618 293 72 29 chr2 224397003 224397057 -26290797 + L1MC4 LINE L1 6649 6699 -1343 2098 36 0 4 chr2 224397057 224397305 -26290549 - L1PA3 LINE L1 0 6155 5909 618 293 72 29 chr2 224397305 224397458 -26290396 + L1MC4 LINE L1 6699 6865 -1177 515 256 47 41 chr2 224397454 224397626 -26290228 - L1MEc LINE L1 -3570 2645 2473 * 1410 174 68 70 chr2 224397631 224397809 -26290045 - MLT1B LTR MaLR -4 386 209 2342 118 25 27 chr2 224397809 224398174 -26289680 - THE1B LTR MaLR 0 364 1 1410 174 68 70 chr2 224398174 224398380 -26289474 - MLT1B LTR MaLR -181 209 3 791 243 116 7 chr2 224398389 224398791 -26289063 - L1MEc LINE L1 -3737 2478 2073 1668 296 43 13 chr2 224400058 224400806 -26287048 - L1MEc LINE L1 -4314 2082 1313 2286 131 18 12 chr2 224400867 224401202 -26286652 - MER1B DNA MER1_type 0 337 1 1492 240 58 11 chr2 224401320 224401754 -26286100 - L1MC4 LINE L1 -141 7901 7448 2289 256 19 38 chr2 224401809 224402634 -26285220 + L1 LINE L1 2697 3506 -2640 384 71 0 0 chr2 224402634 224402690 -26285164 + (CA)n Simple_repeat Simple_repeat 1 56 0 2601 111 11 5 chr2 224402742 224403112 -26284742 - L1PB3 LINE L1 0 6154 5783 451 92 0 0 chr2 224403171 224403236 -26284618 + Alu SINE Alu 231 295 -15 291 275 0 12 chr2 224403281 224403361 -26284493 - MER41B LTR ERV1 -299 336 258 2222 102 9 0 chr2 224403534 224403859 -26283995 - L1P5 LINE L1 -529 5625 5298 1908 203 32 13 chr2 224403845 224404309 -26283545 + L1P5 LINE L1 4846 5318 -828 * 226 315 56 36 chr2 224404333 224404635 -26283219 + L1ME LINE L1 3304 3611 -2469 2037 149 7 3 chr2 224404637 224404946 -26282908 + AluJb SINE Alu 3 312 0 2170 256 82 36 chr2 224405224 224407722 -26280132 + L1ME1 LINE L1 157 2786 -3294 * 2267 208 34 109 chr2 224407708 224407898 -26279956 + L1ME1 LINE L1 5346 5549 -551 342 94 19 0 chr2 224407898 224407951 -26279903 + U5 snRNA snRNA 1 54 -62 2267 208 34 109 chr2 224407951 224408251 -26279603 + L1ME1 LINE L1 5549 5811 -289 219 69 0 0 chr2 224408251 224408280 -26279574 + (TGGA)n Simple_repeat Simple_repeat 4 32 0 2267 208 34 109 chr2 224408280 224408542 -26279312 + L1ME1 LINE L1 5811 6091 -9 316 269 90 50 chr2 224408583 224408784 -26279070 + L1ME LINE L1 3727 3935 -2145 2529 158 100 7 chr2 224408847 224409309 -26278545 - MLT1D LTR MaLR 0 505 1 2041 293 101 19 chr2 224409331 224410151 -26277703 + ERVL LTR ERVL 4069 4955 -809 2240 144 14 19 chr2 224411377 224411654 -26276200 - MLT1A1 LTR MaLR 0 365 89 2155 132 135 5 chr2 224411654 224412033 -26275821 + MSTA LTR MaLR 1 428 0 2240 144 14 19 chr2 224412033 224412122 -26275732 - MLT1A1 LTR MaLR -276 89 1 950 235 22 23 chr2 224412284 224412587 -26275267 + MLT1J2 LTR MaLR 2 306 -140 3013 236 32 2 chr2 224413227 224413851 -26274003 + MER45B DNA AcHobo 4 646 -394 5110 142 18 15 chr2 224413851 224414713 -26273141 + L1MA4 LINE L1 5399 6266 -34 8539 111 25 22 chr2 224414713 224416006 -26271848 - HSMAR2 DNA Mariner -4 1298 2 5110 142 18 15 chr2 224416006 224416028 -26271826 + L1MA4 LINE L1 6266 6286 -14 1443 159 159 11 chr2 224416028 224416040 -26271814 + MER45B DNA AcHobo 637 646 -935 261 0 0 0 chr2 224416040 224416069 -26271785 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1443 159 159 11 chr2 224416069 224416407 -26271447 + MER45B DNA AcHobo 646 1039 -1 4921 196 91 66 chr2 224416502 224417741 -26270113 + L1MDa LINE L1 2 1507 -5033 2178 122 0 0 chr2 224417741 224418037 -26269817 + AluSx SINE Alu 1 296 -16 4921 196 91 66 chr2 224418037 224418580 -26269274 + L1MDa LINE L1 1507 2035 -4505 249 167 0 19 chr2 224419289 224419343 -26268511 - MER5A DNA MER1_type -1 188 136 1659 146 11 36 chr2 224419374 224419655 -26268199 - AluJb SINE Alu -16 296 23 748 207 0 0 chr2 224419669 224419814 -26268040 - MER5A DNA MER1_type -44 145 1 764 277 130 38 chr2 224419981 224420404 -26267450 - LTR33 LTR ERVL -55 466 5 207 0 0 0 chr2 224421407 224421430 -26266424 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 333 287 20 10 chr2 224422082 224422183 -26265671 + MIR3 SINE MIR 103 204 -4 264 286 26 85 chr2 224422670 224422859 -26264995 + MIR SINE MIR 31 208 -54 196 250 58 0 chr2 224423561 224423613 -26264241 + L3b LINE CR1 1343 1397 -186 364 352 55 31 chr2 224424744 224425000 -26262854 + L3 LINE CR1 1284 1545 -32 190 295 35 128 chr2 224425168 224425395 -26262459 - L2 LINE L2 -51 3221 3016 383 143 242 93 chr2 224426082 224426163 -26261691 - LTR50 LTR ERVL -48 747 679 2186 110 3 7 chr2 224426163 224426464 -26261390 + AluSx SINE Alu 1 300 -12 383 143 242 93 chr2 224426464 224426543 -26261311 - LTR50 LTR ERVL -116 679 563 1055 224 190 17 chr2 224426543 224426896 -26260958 - LTR50 LTR ERVL -381 414 1 1028 232 116 46 chr2 224426961 224427374 -26260480 - MLT1J1 LTR MaLR -4 442 1 336 284 177 37 chr2 224427753 224427996 -26259858 - L1 LINE L1 -923 5223 4947 1122 194 147 32 chr2 224428109 224428449 -26259405 - MLT1D LTR MaLR 0 505 127 2241 180 34 10 chr2 224428450 224428759 -26259095 - MSTC LTR MaLR -7 421 97 1952 88 72 4 chr2 224428759 224429061 -26258793 - AluY SINE Alu 0 322 3 2241 180 34 10 chr2 224429061 224429161 -26258693 - MSTC LTR MaLR -331 97 1 399 145 72 130 chr2 224429161 224429227 -26258627 - MLT1D LTR MaLR -437 68 72 1889 178 5 70 chr2 224429227 224429644 -26258210 + MLT1B LTR MaLR 1 390 0 399 145 72 130 chr2 224429644 224429714 -26258140 - MLT1D LTR MaLR -432 73 1 331 254 147 15 chr2 224429723 224429920 -26257934 - L1 LINE L1 -1317 4829 4607 249 298 48 24 chr2 224430089 224430213 -26257641 - MIR SINE MIR -59 149 23 417 161 0 0 chr2 224431437 224431524 -26256330 + (TCCA)n Simple_repeat Simple_repeat 4 90 0 590 200 53 29 chr2 224432318 224432484 -26255370 + MIR SINE MIR 36 205 -57 629 191 53 20 chr2 224434152 224434304 -26253550 + MER103 DNA DNA 2 158 -8 985 226 26 0 chr2 224434361 224434551 -26253303 + MER63A DNA MER1_type 1 195 -15 1077 284 37 58 chr2 224435102 224435670 -26252184 + L2 LINE L2 1951 2506 -808 2012 150 7 0 chr2 224436130 224436436 -26251418 + AluSx SINE Alu 1 308 -4 1673 184 103 34 chr2 224436758 224437253 -26250601 - MER69 DNA AcHobo -9 2517 1989 3063 156 46 43 chr2 224437270 224437961 -26249893 - L1MB2 LINE L1 -2 6169 5477 274 261 115 30 chr2 224438099 224438264 -26249590 + MIR SINE MIR 70 248 -14 680 287 83 0 chr2 224438336 224438566 -26249288 + MIR SINE MIR 14 262 0 207 182 15 30 chr2 224438568 224438634 -26249220 + (TTA)n Simple_repeat Simple_repeat 2 66 0 2397 133 20 33 chr2 224438840 224439293 -26248561 + L1MA7 LINE L1 5844 6290 -1 23 0 0 0 chr2 224439293 224439316 -26248538 + AT_rich Low_complexity Low_complexity 1 23 0 675 325 182 6 chr2 224440378 224440845 -26247009 + L3 LINE CR1 916 1464 -113 2135 117 7 13 chr2 224441300 224441607 -26246247 + AluSp SINE Alu 1 305 -8 338 244 11 0 chr2 224441823 224441913 -26245941 + MIR SINE MIR 56 146 -116 930 207 139 17 chr2 224441932 224442257 -26245597 + MLT2D LTR ERVL 1 397 0 451 270 26 63 chr2 224443184 224443373 -26244481 - MER5A DNA MER1_type 0 189 8 494 258 13 26 chr2 224443213 224443364 -26244490 + MER5B DNA MER1_type 29 177 -1 2137 92 0 52 chr2 224443466 224443791 -26244063 + AluY SINE Alu 1 308 -3 203 280 0 0 chr2 224444374 224444424 -26243430 - MIR3 SINE MIR -8 200 151 389 243 20 115 chr2 224444641 224444789 -26243065 - MER20 DNA MER1_type -16 203 70 270 361 99 41 chr2 224444827 224445170 -26242684 - L2 LINE L2 -88 3184 2822 226 257 181 29 chr2 224445565 224445670 -26242184 + MIR SINE MIR 20 140 -68 187 337 12 12 chr2 224445682 224445768 -26242086 + MIR3 SINE MIR 72 157 -51 280 188 0 0 chr2 224445929 224445977 -26241877 + L3 LINE CR1 1523 1570 -7 205 330 0 53 chr2 224447047 224447235 -26240619 + GA-rich Low_complexity Low_complexity 3 180 0 242 310 69 40 chr2 224447269 224447443 -26240411 - MIR3 SINE MIR -15 193 15 569 252 29 0 chr2 224447933 224448072 -26239782 + L1MD3 LINE L1 7810 7952 -43 243 0 0 0 chr2 224448073 224448100 -26239754 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1020 291 139 41 chr2 224448169 224448585 -26239269 - MER115 DNA AcHobo -236 457 1 1723 181 99 11 chr2 224448735 224449099 -26238755 - MSTD LTR MaLR 0 396 1 197 250 83 14 chr2 224449478 224449550 -26238304 + L2 LINE L2 3235 3311 -2 853 246 84 0 chr2 224449629 224449832 -26238022 - MER58A DNA MER1_type 0 224 5 359 263 8 51 chr2 224450447 224450565 -26237289 - MIR SINE MIR -64 144 32 306 309 101 36 chr2 224450928 224451067 -26236787 + L2 LINE L2 3096 3243 -29 297 258 10 21 chr2 224451530 224451627 -26236227 + MIR SINE MIR 156 251 -11 647 250 7 14 chr2 224452600 224452740 -26235114 + MER63A DNA MER1_type 55 193 -17 357 316 83 0 chr2 224452886 224453054 -26234800 + MIR SINE MIR 48 229 -33 244 389 30 0 chr2 224453310 224453441 -26234413 + L2 LINE L2 3137 3271 -1 25247 30 2 5 chr2 224453670 224456973 -26230881 - L1PA3 LINE L1 -479 5676 2388 4091 35 2 6 chr2 224456973 224457451 -26230403 + L1PA3 LINE L1 5665 6152 -3 310 204 176 9 chr2 224457467 224457575 -26230279 - L1ME3 LINE L1 -17 6145 6020 2340 232 70 8 chr2 224457588 224458100 -26229754 + MLT1H1 LTR MaLR 12 555 0 2560 218 63 46 chr2 224458112 224459265 -26228589 - L1ME3 LINE L1 -152 6012 4829 282 212 34 102 chr2 224459504 224459622 -26228232 - L2 LINE L2 -8 3264 3155 270 274 103 62 chr2 224460012 224460158 -26227696 - MER5B DNA MER1_type -25 153 2 2779 10 0 10 chr2 224460510 224460813 -26227041 + AluYa5 SINE Alu 1 300 -11 238 193 129 117 chr2 224461296 224461467 -26226387 + MIR3 SINE MIR 33 205 -3 188 279 15 0 chr2 224462095 224462163 -26225691 - L3b LINE CR1 -196 1387 1319 204 67 0 0 chr2 224462708 224462738 -26225116 + (TG)n Simple_repeat Simple_repeat 1 30 0 338 314 48 24 chr2 224463624 224463748 -26224106 + L2 LINE L2 3141 3267 -5 616 177 29 17 chr2 224463805 224463980 -26223874 + GA-rich Low_complexity Low_complexity 1 177 0 464 86 14 0 chr2 224464137 224464207 -26223647 + (TG)n Simple_repeat Simple_repeat 1 71 0 468 51 0 0 chr2 224465197 224465256 -26222598 + (CA)n Simple_repeat Simple_repeat 1 59 0 223 269 112 52 chr2 224465582 224465716 -26222138 - MER5A DNA MER1_type -4 185 44 549 0 0 0 chr2 224468004 224468065 -26219789 + (CA)n Simple_repeat Simple_repeat 1 61 0 259 330 0 11 chr2 224468088 224468179 -26219675 + MIR SINE MIR 16 105 -103 1264 217 18 17 chr2 224468217 224468522 -26219332 + MLT2D LTR ERVL 68 371 -43 590 134 0 0 chr2 224468522 224468604 -26219250 - Tigger5 DNA MER2_type 0 2323 2242 476 177 0 0 chr2 224468594 224468673 -26219181 + Tigger5 DNA MER2_type 2242 2320 -3 * 383 203 54 0 chr2 224468673 224468746 -26219108 - Tigger5 DNA MER2_type -2245 78 2 359 61 0 20 chr2 224468748 224468797 -26219057 + MLT2D LTR ERVL 472 519 -1 729 289 109 18 chr2 224469291 224469781 -26218073 + L2 LINE L2 2553 3081 -191 460 281 169 39 chr2 224469949 224470105 -26217749 - L2 LINE L2 -40 3273 3139 2618 150 19 5 chr2 224470105 224470525 -26217329 + MSTB LTR MaLR 1 426 0 460 281 169 39 chr2 224470525 224470728 -26217126 - L2 LINE L2 -174 3139 2867 208 374 65 0 chr2 224472014 224472121 -26215733 - L2 LINE L2 0 3272 3159 289 257 81 74 chr2 224472307 224472455 -26215399 - MIR SINE MIR -2 260 112 191 311 193 8 chr2 224472635 224472754 -26215100 - L2 LINE L2 0 3272 3132 2143 75 14 0 chr2 224474828 224475150 -26212704 - AluY SINE Alu 0 326 1 22 35 0 0 chr2 224476621 224476650 -26211204 + AT_rich Low_complexity Low_complexity 1 29 0 184 367 73 7 chr2 224477173 224477323 -26210531 - L2 LINE L2 -1 3271 3112 23 33 0 0 chr2 224478181 224478211 -26209643 + AT_rich Low_complexity Low_complexity 1 30 0 2079 130 53 14 chr2 224479502 224479863 -26207991 + THE1C LTR MaLR 1 375 0 719 254 20 5 chr2 224479921 224480122 -26207732 - L1ME1 LINE L1 -6 6160 5957 270 193 0 0 chr2 224480160 224480217 -26207637 + (CA)n Simple_repeat Simple_repeat 2 58 0 1721 178 66 33 chr2 224480217 224480610 -26207244 - L1ME1 LINE L1 -223 5943 5538 343 301 18 26 chr2 224480698 224480811 -26207043 + L3 LINE CR1 1388 1499 -78 391 224 47 12 chr2 224481257 224481342 -26206512 + MIR SINE MIR 28 115 -147 402 21 0 0 chr2 224481459 224481506 -26206348 + (CTA)n Simple_repeat Simple_repeat 3 49 0 340 297 139 48 chr2 224482377 224482586 -26205268 + MIR SINE MIR 21 248 -14 348 284 93 43 chr2 224483789 224483951 -26203903 + MLT1K LTR MaLR 419 588 0 215 274 48 12 chr2 224483952 224484036 -26203818 - MIR SINE MIR -156 106 20 247 235 0 0 chr2 224484139 224484190 -26203664 - L2 LINE L2 -37 3235 3185 207 239 0 0 chr2 224484500 224484546 -26203308 - MIR SINE MIR -113 149 104 358 216 8 104 chr2 224485046 224485180 -26202674 - LTR67 LTR ERVL 0 557 437 749 171 0 13 chr2 224485602 224485754 -26202100 + G-rich Low_complexity Low_complexity 3 152 0 515 299 116 15 chr2 224487190 224487510 -26200344 - L1ME LINE L1 -299 5822 5474 330 300 0 0 chr2 224488174 224488264 -26199590 - MIR SINE MIR -56 206 117 500 254 90 50 chr2 224489772 224489973 -26197881 - MIR SINE MIR -42 220 12 445 299 4 4 chr2 224490755 224490880 -26196974 + MIR SINE MIR 10 135 -73 504 59 0 0 chr2 224491005 224491073 -26196781 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 445 258 207 8 chr2 224491209 224491408 -26196446 + MIR SINE MIR 20 256 -6 367 310 40 46 chr2 224491995 224492169 -26195685 - MIR3 SINE MIR -1 207 35 371 269 53 45 chr2 224492258 224492431 -26195423 + MIR3 SINE MIR 15 191 -62 1206 223 162 66 chr2 224494401 224494827 -26193027 + MLT1H LTR MaLR 2 468 -81 208 265 162 26 chr2 224495578 224495695 -26192159 + L3b LINE CR1 1359 1491 -92 519 45 0 0 chr2 224496858 224496924 -26190930 + (CA)n Simple_repeat Simple_repeat 1 66 0 333 279 19 25 chr2 224496932 224497090 -26190764 + CT-rich Low_complexity Low_complexity 1 157 0 201 229 0 0 chr2 224497740 224497788 -26190066 + (TGAA)n Simple_repeat Simple_repeat 4 51 0 651 303 18 51 chr2 224498226 224498500 -26189354 + LTR16A1 LTR ERVL 189 453 -4 1014 207 108 31 chr2 224498574 224498914 -26188940 - MSTD LTR MaLR -2 394 3 291 310 63 38 chr2 224498942 224499100 -26188754 - Charlie8 DNA MER1_type -2223 194 33 2018 279 88 18 chr2 224499183 224500118 -26187736 + L1ME1 LINE L1 801 1800 -4596 * 3304 195 38 10 chr2 224500113 224501030 -26186824 + L1ME1 LINE L1 5032 5982 -253 3723 209 51 22 chr2 224551418 224551902 -26135952 + L1MDa LINE L1 2040 2509 -4031 2245 116 0 7 chr2 224551902 224552203 -26135651 + AluSc SINE Alu 1 299 -10 3723 209 51 22 chr2 224552203 224553447 -26134407 + L1MDa LINE L1 2509 3825 -2715 1957 164 17 0 chr2 224553448 224553801 -26134053 + L1MD1 LINE L1 5884 6242 0 2194 137 3 0 chr2 224553807 224554114 -26133740 + AluSx SINE Alu 1 308 -4 927 117 0 16 chr2 224554302 224554430 -26133424 + FRAM SINE Alu 39 164 -12 1366 229 11 39 chr2 224554927 224555364 -26132490 - L1MCa LINE L1 -5025 1401 977 1126 217 64 6 chr2 224555357 224555671 -26132183 + L1ME1 LINE L1 5830 6161 -5 * 779 283 19 22 chr2 224555685 224556007 -26131847 + L1ME LINE L1 5417 5737 -433 660 229 104 15 chr2 224556455 224556656 -26131198 - MER20 DNA MER1_type 0 219 1 266 239 123 23 chr2 224557070 224557200 -26130654 + L2 LINE L2 3113 3255 -17 5309 130 132 100 chr2 224558082 224559595 -26128259 - pTR5 LTR ERV1 0 2438 743 329 293 104 24 chr2 224559641 224559805 -26128049 + MIR SINE MIR 5 181 -81 463 334 35 17 chr2 224559874 224560103 -26127751 - MIR SINE MIR -28 234 3 185 186 23 0 chr2 224560450 224560493 -26127361 + L3b LINE CR1 1278 1321 -262 236 288 0 50 chr2 224563097 224563177 -26124677 - MLT1K LTR MaLR -327 261 186 1089 260 92 26 chr2 224563343 224563689 -26124165 + MLT1J LTR MaLR 6 374 -137 237 360 62 42 chr2 224563805 224563817 -26124037 + MIR SINE MIR 42 52 -210 1872 157 0 39 chr2 224563817 224564129 -26123725 + AluJo SINE Alu 1 300 -12 237 360 62 42 chr2 224564129 224564318 -26123536 + MIR SINE MIR 52 253 -9 325 281 124 16 chr2 224564563 224564684 -26123170 - L2 LINE L2 -2 3270 3137 1006 205 43 31 chr2 224564713 224564967 -26122887 - MIR SINE MIR -4 258 2 635 301 52 87 chr2 224565043 224565412 -26122442 + L2 LINE L2 2917 3272 0 184 182 0 0 chr2 224566077 224566110 -26121744 - MIR SINE MIR -62 146 114 211 273 231 33 chr2 224566203 224566445 -26121409 - L3 LINE CR1 -108 1469 1180 499 234 0 9 chr2 224566751 224566984 -26120870 + (TG)n Simple_repeat Simple_repeat 1 230 0 431 246 7 0 chr2 224567039 224567327 -26120527 + (TG)n Simple_repeat Simple_repeat 1 290 0 495 250 24 0 chr2 224567908 224568032 -26119822 + MER5B DNA MER1_type 2 128 -50 336 289 21 0 chr2 224568444 224568541 -26119313 - MER5A DNA MER1_type -80 109 11 2347 111 0 9 chr2 224568559 224568899 -26118955 + AluSx SINE Alu 1 337 0 632 259 60 32 chr2 224569362 224569578 -26118276 + MIR SINE MIR 20 241 -21 241 294 47 0 chr2 224569636 224569721 -26118133 + MIR SINE MIR 97 185 -77 2183 174 47 37 chr2 224569817 224570077 -26117777 + Charlie1b DNA MER1_type 1 257 -2504 1877 133 7 33 chr2 224570077 224570377 -26117477 + AluJo SINE Alu 11 302 -10 2183 174 47 37 chr2 224570377 224570628 -26117226 + Charlie1b DNA MER1_type 257 517 -6 955 282 195 30 chr2 224570932 224571404 -26116450 + MLT1K LTR MaLR 37 586 -2 226 227 0 0 chr2 224572316 224572360 -26115494 + (CA)n Simple_repeat Simple_repeat 2 45 0 25 0 0 0 chr2 224574623 224574648 -26113206 + AT_rich Low_complexity Low_complexity 1 25 0 312 27 0 0 chr2 224576036 224576073 -26111781 + (TC)n Simple_repeat Simple_repeat 2 38 0 659 65 81 10 chr2 224577207 224577694 -26110160 + (CA)n Simple_repeat Simple_repeat 1 521 0 239 319 11 11 chr2 224578061 224578152 -26109702 + MER96 DNA MER1_type? 77 167 -8 231 188 0 0 chr2 224580285 224580333 -26107521 + (CA)n Simple_repeat Simple_repeat 1 48 0 231 114 0 0 chr2 224580857 224580892 -26106962 + (TGGA)n Simple_repeat Simple_repeat 2 36 0 1455 66 2 0 chr2 224580927 224581442 -26106412 + (TGGA)n Simple_repeat Simple_repeat 1 516 0 228 263 185 5 chr2 224582353 224582454 -26105400 + MIR SINE MIR 131 244 -18 330 100 114 50 chr2 224582567 224582663 -26105191 + L1MA7 LINE L1 6157 6257 -34 1642 210 0 7 chr2 224582663 224582963 -26104891 - AluJo SINE Alu -14 298 1 330 100 114 50 chr2 224582963 224582980 -26104874 + L1MA7 LINE L1 6257 6271 -20 250 250 18 0 chr2 224582980 224583036 -26104818 - MER5A DNA MER1_type -130 59 3 319 327 73 44 chr2 224584512 224584746 -26103108 + MIR SINE MIR 22 259 -3 1668 168 0 44 chr2 224585784 224586099 -26101755 - AluJb SINE Alu -11 301 1 899 249 14 0 chr2 224586099 224586312 -26101542 - MER58A DNA MER1_type -8 216 1 2476 179 28 24 chr2 224586806 224587269 -26100585 + MLT1C LTR MaLR 1 465 -2 232 337 32 11 chr2 224587449 224587544 -26100310 - L3b LINE CR1 -327 1256 1160 389 269 62 0 chr2 224587805 224587923 -26099931 - MIR3 SINE MIR -11 197 74 604 320 93 18 chr2 224588969 224589194 -26098660 + MIR SINE MIR 20 261 -1 260 333 52 0 chr2 224589310 224589406 -26098448 - MIR3 SINE MIR -54 154 54 391 320 47 8 chr2 224590706 224590834 -26097020 - MIR SINE MIR -127 135 3 753 318 18 29 chr2 224591027 224591307 -26096547 + L3 LINE CR1 1284 1560 -17 302 300 79 29 chr2 224591994 224592134 -26095720 + L3b LINE CR1 1326 1472 -111 195 369 12 25 chr2 224592747 224592907 -26094947 + L2 LINE L2 2933 3090 -182 697 282 136 0 chr2 224592989 224593209 -26094645 + MIR SINE MIR 13 262 0 191 167 17 100 chr2 224594500 224594560 -26093294 - MIR SINE MIR -65 143 89 655 238 17 0 chr2 224594950 224595122 -26092732 - MER58A DNA MER1_type -3 221 47 789 249 19 0 chr2 224595797 224596010 -26091844 - MER58A DNA MER1_type -7 217 1 315 228 65 11 chr2 224596028 224596120 -26091734 - MIR SINE MIR -89 119 23 368 270 95 0 chr2 224596246 224596372 -26091482 - MIR SINE MIR -121 141 4 223 250 47 0 chr2 224596676 224596740 -26091114 + L2 LINE L2 3183 3249 -23 357 252 29 65 chr2 224596928 224597067 -26090787 + LTR33 LTR ERVL 48 181 -340 241 205 170 45 chr2 224597140 224597252 -26090602 + LTR33 LTR ERVL 324 449 -72 252 208 57 0 chr2 224598233 224598286 -26089568 + MIR SINE MIR 109 164 -98 231 103 0 0 chr2 224598995 224599034 -26088820 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 190 314 0 0 chr2 224599037 224599088 -26088766 + L2 LINE L2 3210 3260 -12 276 316 42 60 chr2 224599398 224599566 -26088288 + MIR3 SINE MIR 37 201 -7 931 180 46 60 chr2 224600709 224600877 -26086977 + MER20 DNA MER1_type 5 171 -48 2190 86 3 33 chr2 224600877 224601178 -26086676 + AluSq SINE Alu 1 292 -21 931 180 46 60 chr2 224601178 224601226 -26086628 + MER20 DNA MER1_type 171 218 -1 217 303 20 20 chr2 224601668 224601767 -26086087 + GA-rich Low_complexity Low_complexity 1 99 0 263 302 0 0 chr2 224602857 224602920 -26084934 + (TG)n Simple_repeat Simple_repeat 2 64 0 318 26 0 0 chr2 224603726 224603765 -26084089 + (CA)n Simple_repeat Simple_repeat 2 40 0 282 73 0 0 chr2 224604709 224604750 -26083104 + (CA)n Simple_repeat Simple_repeat 2 42 0 865 232 72 0 chr2 224605460 224605697 -26082157 + MER33 DNA MER1_type 6 259 -65 545 186 98 16 chr2 224605695 224605878 -26081976 + Charlie5 DNA MER1_type 2427 2624 0 * 184 296 78 43 chr2 224606099 224606214 -26081640 + L2 LINE L2 314 432 -2882 555 314 16 11 chr2 224607186 224607374 -26080480 + MER5A DNA MER1_type 1 189 0 186 43 0 0 chr2 224610847 224610870 -26076984 + (CA)n Simple_repeat Simple_repeat 2 24 0 231 125 0 0 chr2 224611335 224611375 -26076479 + (CA)n Simple_repeat Simple_repeat 2 41 0 408 306 22 0 chr2 224612216 224612350 -26075504 - MIR SINE MIR -90 172 36 335 294 18 25 chr2 224612718 224612881 -26074973 + GA-rich Low_complexity Low_complexity 2 163 0 2258 251 246 14 chr2 224613806 224614873 -26072981 + L2 LINE L2 2013 3311 -2 1075 363 88 23 chr2 224614889 224616248 -26071606 + L2 LINE L2 1386 2833 -481 670 305 15 6 chr2 224616602 224616854 -26071000 - L1 LINE L1 -1914 4232 3985 338 132 0 0 chr2 224618002 224618055 -26069799 + MER63 DNA MER1_type 695 747 -313 377 297 11 99 chr2 224618899 224619081 -26068773 + L2 LINE L2 3016 3181 -91 261 0 0 0 chr2 224619947 224619976 -26067878 + (CTG)n Simple_repeat Simple_repeat 3 31 0 481 250 36 127 chr2 224621108 224621360 -26066494 + MIR SINE MIR 22 250 -12 426 69 0 0 chr2 224622362 224622420 -26065434 + (CA)n Simple_repeat Simple_repeat 2 59 0 215 376 91 21 chr2 224622649 224622891 -26064963 - MIR SINE MIR 0 262 4 216 67 0 0 chr2 224622902 224622932 -26064922 + (CA)n Simple_repeat Simple_repeat 1 30 0 306 0 0 0 chr2 224623224 224623258 -26064596 + (CA)n Simple_repeat Simple_repeat 2 35 0 2226 104 0 3 chr2 224623645 224623944 -26063910 + AluSx SINE Alu 1 298 -14 466 310 14 7 chr2 224625770 224625912 -26061942 - MER5A DNA MER1_type 0 189 47 385 252 55 24 chr2 224625800 224625927 -26061927 + MER5A DNA MER1_type 40 170 -19 * 255 61 0 0 chr2 224627340 224627373 -26060481 + (TC)n Simple_repeat Simple_repeat 2 34 0 291 330 80 0 chr2 224627384 224627472 -26060382 - MER91C DNA MER1_type -44 96 2 254 249 149 43 chr2 224629031 224629194 -26058660 - MIR3 SINE MIR -21 187 8 181 29 59 29 chr2 224630280 224630314 -26057540 + (GGGA)n Simple_repeat Simple_repeat 2 36 0 270 0 0 0 chr2 224630455 224630485 -26057369 + (CA)n Simple_repeat Simple_repeat 2 31 0 464 133 0 64 chr2 224630710 224630883 -26056971 + (CAGCC)n Simple_repeat Simple_repeat 5 166 0 211 347 75 34 chr2 224632683 224632830 -26055024 + MER5A DNA MER1_type 4 156 -33 * 292 325 65 13 chr2 224632710 224632864 -26054990 - MER5B DNA MER1_type -16 162 1 617 336 114 28 chr2 224632871 224633344 -26054510 - L3 LINE CR1 -112 1465 952 627 285 70 9 chr2 224633358 224633572 -26054282 + MIR SINE MIR 16 242 -20 214 323 87 36 chr2 224634364 224634559 -26053295 - MIR3 SINE MIR -3 205 1 839 181 24 109 chr2 224635097 224635307 -26052547 + MER20 DNA MER1_type 28 219 0 476 319 19 19 chr2 224635354 224635511 -26052343 + MIR3 SINE MIR 29 185 -23 294 324 83 0 chr2 224636144 224636252 -26051602 - MIR SINE MIR -70 192 76 396 262 99 37 chr2 224636369 224636560 -26051294 + MARNA DNA Mariner 19 221 -365 245 278 0 28 chr2 224638032 224638104 -26049750 + MIR3 SINE MIR 117 186 -22 534 235 94 12 chr2 224638774 224638944 -26048910 + MIR SINE MIR 49 232 -30 936 270 23 58 chr2 224639012 224639357 -26048497 + L1MC4a LINE L1 5539 5871 -1937 1466 226 77 37 chr2 224639376 224639905 -26047949 + L2 LINE L2 2772 3308 -5 217 158 53 18 chr2 224640206 224640263 -26047591 + MIR SINE MIR 9 67 -195 762 309 42 4 chr2 224640340 224640576 -26047278 - MIR SINE MIR -3 259 15 238 192 19 0 chr2 224642083 224642135 -26045719 + L2 LINE L2 3200 3252 -20 189 171 0 0 chr2 224642147 224642182 -26045672 + GA-rich Low_complexity Low_complexity 4 38 0 211 292 0 14 chr2 224642951 224643023 -26044831 - L3b LINE CR1 -188 1395 1325 331 246 33 74 chr2 224643788 224643910 -26043944 + MIR SINE MIR 40 156 -106 4142 176 50 14 chr2 224644033 224644989 -26042865 + L1MB8 LINE L1 5184 6174 -4 279 0 0 0 chr2 224645807 224645838 -26042016 + (CA)n Simple_repeat Simple_repeat 2 32 0 472 241 158 0 chr2 224646218 224646351 -26041503 - MIR3 SINE MIR -21 187 34 480 339 41 16 chr2 224646486 224646731 -26041123 - MIR SINE MIR 0 262 12 888 278 115 25 chr2 224646734 224647098 -26040756 + MLT1I LTR MaLR 11 407 -2 235 271 10 21 chr2 224647352 224647448 -26040406 + CT-rich Low_complexity Low_complexity 1 95 0 2081 192 16 8 chr2 224648361 224648746 -26039108 + MLT1B LTR MaLR 1 388 -2 214 341 54 39 chr2 224649132 224649261 -26038593 + MIR SINE MIR 35 165 -43 530 310 88 0 chr2 224650183 224650354 -26037500 + MIR SINE MIR 51 236 -26 289 190 35 0 chr2 224650561 224650619 -26037235 - MIR SINE MIR -201 61 2 269 300 11 11 chr2 224651769 224651859 -26035995 + MIR3 SINE MIR 116 205 -3 1099 104 7 0 chr2 224653375 224653529 -26034325 + L1PA8 LINE L1 6017 6171 -1 349 333 126 0 chr2 224653606 224653780 -26034074 - L3b LINE CR1 -200 1383 1188 21 71 0 0 chr2 224654298 224654340 -26033514 + AT_rich Low_complexity Low_complexity 1 42 0 296 53 0 0 chr2 224654517 224654584 -26033270 - Alu SINE Alu 0 309 243 1776 171 0 0 chr2 224654586 224654879 -26032975 - AluJo SINE Alu -19 293 1 2009 143 0 0 chr2 224655048 224655348 -26032506 - AluJo SINE Alu -12 300 1 364 250 28 42 chr2 224655354 224655533 -26032321 - HAL1b LINE L1 -193 2314 747 367 263 60 53 chr2 224655794 224655909 -26031945 + L2 LINE L2 3139 3257 -15 198 0 0 0 chr2 224655909 224655931 -26031923 + (TGGG)n Simple_repeat Simple_repeat 1 22 0 367 263 60 53 chr2 224655931 224655948 -26031906 + L2 LINE L2 3257 3272 0 900 173 0 0 chr2 224655948 224656127 -26031727 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 438 331 33 33 chr2 224656316 224656500 -26031354 + L2 LINE L2 3087 3270 -2 328 279 39 10 chr2 224657957 224658061 -26029793 + GA-rich Low_complexity Low_complexity 2 108 0 2477 62 3 0 chr2 224659085 224659391 -26028463 - AluSp SINE Alu -6 307 1 186 240 58 58 chr2 224659438 224659542 -26028312 - MIR3 SINE MIR -50 158 55 2315 127 33 28 chr2 224660282 224660644 -26027210 + THE1B LTR MaLR 1 364 0 482 340 127 18 chr2 224661250 224661582 -26026272 + L2 LINE L2 2917 3284 -29 239 209 154 0 chr2 224661840 224661931 -26025923 + MIR3 SINE MIR 60 164 -44 639 272 107 21 chr2 224661940 224662230 -26025624 + L2 LINE L2 2999 3313 0 639 336 19 0 chr2 224663044 224663255 -26024599 + MIR SINE MIR 23 237 -25 608 259 192 26 chr2 224663380 224663881 -26023973 + L2 LINE L2 2668 3294 -19 2184 89 7 13 chr2 224663881 224664185 -26023669 - AluSx SINE Alu -10 302 1 608 259 192 26 chr2 224664185 224664207 -26023647 + L2 LINE L2 3294 3311 -2 270 0 0 0 chr2 224665184 224665214 -26022640 + (CA)n Simple_repeat Simple_repeat 1 30 0 312 250 36 111 chr2 224665504 224665696 -26022158 + MIR3 SINE MIR 9 180 -28 270 281 33 0 chr2 224665968 224666080 -26021774 - MIR3 SINE MIR -27 181 66 2003 122 0 0 chr2 224666160 224666468 -26021386 + AluSx SINE Alu 3 310 0 672 297 65 9 chr2 224667785 224668017 -26019837 - MIR SINE MIR -1 261 17 1517 213 102 37 chr2 224668054 224668452 -26019402 + MLT1C LTR MaLR 8 438 -29 1089 173 76 149 chr2 224668452 224668821 -26019033 + MER2 DNA MER2_type 2 343 -1 1517 213 102 37 chr2 224668821 224668854 -26019000 + MLT1C LTR MaLR 438 467 0 462 252 238 0 chr2 224669147 224669298 -26018556 + MIR SINE MIR 61 247 -15 466 291 68 10 chr2 224671873 224672063 -26015791 + MIR SINE MIR 40 244 -18 388 265 133 38 chr2 224672963 224673174 -26014680 + MIR SINE MIR 2 232 -30 364 272 97 26 chr2 224674936 224675050 -26012804 - L2 LINE L2 0 3313 3192 434 300 83 6 chr2 224675398 224675578 -26012276 - L3b LINE CR1 -110 1473 1280 260 344 42 0 chr2 224676748 224676844 -26011010 + MIR SINE MIR 85 184 -78 572 259 46 18 chr2 224678349 224678534 -26009320 - MIR SINE MIR -63 145 1 269 204 197 58 chr2 224679345 224679482 -26008372 - MIR SINE MIR -57 205 50 375 276 138 26 chr2 224681289 224681355 -26006499 - MER5A DNA MER1_type -4 185 128 288 0 0 0 chr2 224681355 224681387 -26006467 + (CA)n Simple_repeat Simple_repeat 1 32 0 375 276 138 26 chr2 224681387 224681472 -26006382 - MER5A DNA MER1_type -61 128 17 409 309 164 34 chr2 224681572 224681779 -26006075 + MIR SINE MIR 29 262 0 498 33 0 0 chr2 224682486 224682546 -26005308 + (CA)n Simple_repeat Simple_repeat 1 60 0 477 269 31 19 chr2 224682581 224682741 -26005113 - MIR3 SINE MIR -27 181 20 620 159 135 61 chr2 224683136 224683299 -26004555 + MER96 DNA MER1_type 1 175 0 485 288 37 4 chr2 224683324 224683561 -26004293 - MIR SINE MIR 0 262 15 180 294 106 69 chr2 224684692 224684852 -26003002 - MIR3 SINE MIR -32 176 11 2028 89 92 0 chr2 224686285 224686567 -26001287 - AluSc SINE Alu -1 308 1 335 280 93 8 chr2 224687072 224687190 -26000664 + MIR3 SINE MIR 59 186 -22 192 147 0 0 chr2 224687257 224687291 -26000563 + L2 LINE L2 3241 3274 -39 260 373 29 34 chr2 224687532 224687736 -26000118 + MIR SINE MIR 60 262 0 649 268 120 0 chr2 224687738 224687947 -25999907 + MIR SINE MIR 15 248 -14 988 241 120 77 chr2 224689073 224689331 -25998523 - L2 LINE L2 -1 3312 3067 2075 116 7 7 chr2 224689331 224689634 -25998220 + AluSx SINE Alu 1 303 -9 988 241 120 77 chr2 224689634 224689971 -25997883 - L2 LINE L2 -246 3067 2686 399 328 65 27 chr2 224689944 224690130 -25997724 - MIR SINE MIR -57 205 13 * 188 341 11 11 chr2 224690270 224690358 -25997496 - L3b LINE CR1 -185 1398 1311 323 394 78 19 chr2 224692151 224692420 -25995434 + L1ME4a LINE L1 5825 6109 -12 285 186 10 39 chr2 224692743 224692845 -25995009 + G-rich Low_complexity Low_complexity 4 102 0 868 243 69 5 chr2 224693535 224693753 -25994101 - MIR SINE MIR 0 262 31 737 222 138 0 chr2 224695166 224695369 -25992485 - MIR SINE MIR -25 237 7 357 255 97 48 chr2 224695423 224695568 -25992286 - MIR SINE MIR -19 243 92 844 296 56 70 chr2 224695818 224696334 -25991520 + L2 LINE L2 2804 3312 -1 419 354 54 6 chr2 224696382 224696583 -25991271 - MIR SINE MIR -1 261 51 2343 136 7 21 chr2 224696586 224697006 -25990848 + Ricksha DNA DNA 2323 2736 -118 2251 164 46 20 chr2 224697412 224697707 -25990147 - L1MB4 LINE L1 0 6180 5869 2316 127 53 24 chr2 224697707 224698085 -25989769 + MLT1B LTR MaLR 1 389 -1 2251 164 46 20 chr2 224698085 224698228 -25989626 - L1MB4 LINE L1 -311 5869 5731 195 323 301 0 chr2 224698299 224698432 -25989422 - MIR SINE MIR -14 248 76 293 293 85 0 chr2 224698459 224698565 -25989289 - MIR SINE MIR -15 247 133 197 358 30 15 chr2 224698967 224699101 -25988753 - L2 LINE L2 -336 2977 2842 462 338 140 9 chr2 224701448 224701906 -25985948 + L2 LINE L2 2364 2881 -433 404 268 104 10 chr2 224701931 224702110 -25985744 - MIR SINE MIR -65 143 3 188 305 34 0 chr2 224702110 224702165 -25985689 - L2 LINE L2 -202 3070 3014 323 310 120 14 chr2 224702811 224702953 -25984901 - L2 LINE L2 -5 3267 3111 273 278 56 49 chr2 224703473 224703635 -25984219 - MER104 DNA Tc2 -15 165 3 494 321 96 9 chr2 224704040 224704258 -25983596 + MIR SINE MIR 20 256 -6 534 265 0 27 chr2 224704312 224704459 -25983395 - MIR SINE MIR -12 250 108 540 310 43 5 chr2 224705781 224705965 -25981889 - MIR SINE MIR -52 210 20 427 296 107 13 chr2 224706669 224706828 -25981026 - MIR3 SINE MIR 0 208 35 464 348 0 7 chr2 224707581 224707736 -25980118 - MIR SINE MIR -107 155 2 195 42 0 0 chr2 224707974 224707998 -25979856 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 184 352 0 0 chr2 224708174 224708228 -25979626 - L3b LINE CR1 -124 1459 1406 472 294 22 0 chr2 224708572 224708708 -25979146 - MIR SINE MIR -12 250 112 302 403 30 17 chr2 224708764 224708997 -25978857 + L2 LINE L2 2924 3159 -113 321 278 37 9 chr2 224709499 224709607 -25978247 - MIR SINE MIR -60 148 38 207 0 0 0 chr2 224710828 224710851 -25977003 + (TAA)n Simple_repeat Simple_repeat 2 24 0 819 272 49 5 chr2 224710851 224711075 -25976779 - MIR SINE MIR -8 254 21 182 211 0 0 chr2 224712847 224712885 -25974969 - MIR SINE MIR -56 152 115 380 316 94 24 chr2 224713414 224713626 -25974228 - L3 LINE CR1 -3 1574 1348 230 301 19 10 chr2 224714528 224714631 -25973223 + C-rich Low_complexity Low_complexity 3 106 0 216 167 0 0 chr2 224714853 224714889 -25972965 + G-rich Low_complexity Low_complexity 5 40 0 250 239 15 0 chr2 224715581 224715648 -25972206 + (CA)n Simple_repeat Simple_repeat 2 69 0 327 276 86 0 chr2 224716478 224716583 -25971271 + L1MC4 LINE L1 7852 7965 -77 344 323 65 72 chr2 224717952 224718231 -25969623 + L2 LINE L2 2996 3272 0 297 0 0 0 chr2 224718721 224718754 -25969100 + (TC)n Simple_repeat Simple_repeat 1 33 0 234 0 0 0 chr2 224718753 224718779 -25969075 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 210 300 0 29 chr2 224719068 224719138 -25968716 + GA-rich Low_complexity Low_complexity 3 70 0 205 205 0 0 chr2 224719164 224719203 -25968651 + L2 LINE L2 3221 3259 -13 192 305 152 9 chr2 224719731 224719836 -25968018 - MIR SINE MIR -62 146 27 306 276 49 24 chr2 224720867 224720990 -25966864 + MIR3 SINE MIR 11 136 -72 197 281 180 7 chr2 224721087 224721226 -25966628 - L3 LINE CR1 -3 1574 1412 917 328 163 19 chr2 224721273 224721525 -25966329 + L3 LINE CR1 407 621 -956 195 42 0 0 chr2 224721525 224721549 -25966305 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 917 328 163 19 chr2 224721549 224722044 -25965810 + L3 LINE CR1 621 1262 -315 209 272 9 53 chr2 224722504 224722618 -25965236 + CT-rich Low_complexity Low_complexity 5 113 0 221 217 0 22 chr2 224722968 224723014 -25964840 + MIR SINE MIR 81 125 -83 513 277 24 12 chr2 224723141 224723307 -25964547 - MIR SINE MIR 0 262 95 408 343 48 9 chr2 224723726 224723936 -25963918 - L2 LINE L2 -5 3308 3091 637 300 49 24 chr2 224723943 224724190 -25963664 - MIR SINE MIR -8 254 2 180 0 0 0 chr2 224724253 224724273 -25963581 + (CA)n Simple_repeat Simple_repeat 1 20 0 268 238 127 69 chr2 224724642 224724831 -25963023 - MIR3 SINE MIR -1 207 8 264 100 0 0 chr2 224726169 224726209 -25961645 + (ATG)n Simple_repeat Simple_repeat 2 41 0 478 328 55 16 chr2 224726226 224726409 -25961445 - MIR SINE MIR -45 217 28 230 333 9 0 chr2 224726679 224726790 -25961064 + (CA)n Simple_repeat Simple_repeat 1 112 0 913 133 0 0 chr2 224727960 224728088 -25959766 - FLAM_C SINE Alu -5 128 1 220 122 0 24 chr2 224728421 224728462 -25959392 + (CA)n Simple_repeat Simple_repeat 2 41 0 238 306 40 32 chr2 224728499 224728623 -25959231 - MIR SINE MIR -65 143 43 759 230 15 82 chr2 224729397 224729788 -25958066 + L1MC5 LINE L1 7562 7926 -35 234 0 0 0 chr2 224729789 224729815 -25958039 + (CA)n Simple_repeat Simple_repeat 1 26 0 21 71 0 0 chr2 224729889 224729931 -25957923 + AT_rich Low_complexity Low_complexity 1 42 0 429 309 48 6 chr2 224730319 224730532 -25957322 - MIR SINE MIR -39 223 1 384 262 12 128 chr2 224730853 224731092 -25956762 + MIR SINE MIR 13 226 -36 180 0 0 0 chr2 224731784 224731804 -25956050 + (GGA)n Simple_repeat Simple_repeat 3 22 0 365 256 38 68 chr2 224731989 224732122 -25955732 - MIR SINE MIR -59 203 75 256 356 65 46 chr2 224732466 224732727 -25955127 - L3b LINE CR1 -115 1468 1203 234 0 0 0 chr2 224733021 224733047 -25954807 + (CA)n Simple_repeat Simple_repeat 1 26 0 180 0 0 0 chr2 224733046 224733066 -25954788 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 1741 184 106 6 chr2 224733558 224733917 -25953937 + MLT2C1 LTR ERVL 1 395 -2 2319 84 3 0 chr2 224733947 224734245 -25953609 + AluSp SINE Alu 1 299 -14 1723 216 45 6 chr2 224734272 224734851 -25953003 + L1MD3 LINE L1 6927 7984 -11 387 310 45 0 chr2 224735203 224735358 -25952496 - MIR SINE MIR -50 212 51 639 213 38 0 chr2 224735361 224735544 -25952310 + L1MA4 LINE L1 6111 6300 0 939 132 0 69 chr2 224735547 224735706 -25952148 + AluJb SINE Alu 1 148 -164 509 307 52 2 chr2 224736010 224736214 -25951640 - MIR SINE MIR -42 220 3 429 238 86 53 chr2 224736217 224736368 -25951486 + MIR SINE MIR 46 201 -61 335 267 92 113 chr2 224737019 224737214 -25950640 - MIR SINE MIR -13 249 59 225 346 0 10 chr2 224737784 224737885 -25949969 + CT-rich Low_complexity Low_complexity 2 101 0 402 115 0 0 chr2 224738049 224738110 -25949744 + (TG)n Simple_repeat Simple_repeat 2 62 0 273 286 183 0 chr2 224738357 224738483 -25949371 + MER5A DNA MER1_type 26 174 -15 218 323 110 39 chr2 224738614 224738769 -25949085 + MIR SINE MIR 27 192 -70 2305 60 0 7 chr2 224738821 224739142 -25948712 + AluY SINE Alu 1 319 0 3831 198 56 20 chr2 224739167 224740469 -25947385 + L1MB8 LINE L1 3196 4450 -1728 2050 128 3 13 chr2 224740469 224740782 -25947072 - AluSx SINE Alu -2 310 1 3831 198 56 20 chr2 224740782 224741636 -25946218 + L1MB8 LINE L1 4450 5272 -906 2023 169 74 61 chr2 224741636 224742097 -25945757 + MLT1C LTR MaLR 1 467 0 3831 198 56 20 chr2 224742097 224742699 -25945155 + L1MB8 LINE L1 5272 6178 0 2512 217 38 7 chr2 224742864 224743472 -25944382 - L1ME1 LINE L1 -4 6162 5536 577 196 14 43 chr2 224743482 224743620 -25944234 + MER5B DNA MER1_type 45 178 0 809 315 16 4 chr2 224743840 224744094 -25943760 - MIR SINE MIR -3 259 3 496 196 0 16 chr2 224744600 224744728 -25943126 + L1MC3 LINE L1 6237 7783 0 1873 144 3 41 chr2 224744855 224745174 -25942680 + AluJb SINE Alu 1 307 -5 1602 239 52 2 chr2 224745618 224746062 -25941792 + L1ME3 LINE L1 5697 6162 0 229 333 13 13 chr2 224746519 224746594 -25941260 - MIR SINE MIR -168 94 20 2617 178 8 32 chr2 224746652 224747187 -25940667 + MLT1F LTR MaLR 1 522 -20 755 325 104 37 chr2 224747381 224748024 -25939830 + L2 LINE L2 2348 3197 -75 289 361 47 12 chr2 224748743 224748912 -25938942 + MIR SINE MIR 88 262 0 823 247 33 12 chr2 224749354 224749587 -25938267 - MIR SINE MIR -11 251 18 214 254 0 32 chr2 224750345 224750408 -25937446 + C-rich Low_complexity Low_complexity 4 64 0 31 26 0 0 chr2 224750442 224750480 -25937374 + GC_rich Low_complexity Low_complexity 1 38 0 344 125 16 0 chr2 224750684 224750748 -25937106 + GA-rich Low_complexity Low_complexity 1 65 0 338 238 0 10 chr2 224751054 224751155 -25936699 + (CA)n Simple_repeat Simple_repeat 1 100 0 264 30 0 0 chr2 224751294 224751327 -25936527 + (CA)n Simple_repeat Simple_repeat 2 34 0 360 0 0 0 chr2 224752280 224752320 -25935534 + (GA)n Simple_repeat Simple_repeat 2 41 0 203 250 0 0 chr2 224752322 224752362 -25935492 + L2 LINE L2 3266 3305 -8 560 284 128 47 chr2 224752585 224752906 -25934948 + L2 LINE L2 2924 3270 -43 290 212 61 0 chr2 224752914 224752980 -25934874 - MER91A DNA MER1_type -8 188 119 616 276 66 17 chr2 224752987 224753168 -25934686 - MER91A DNA MER1_type -6 190 1 2806 191 7 51 chr2 224753671 224754162 -25933692 + MLT1F LTR MaLR 1 465 -77 1863 152 3 16 chr2 224754162 224754465 -25933389 - AluJb SINE Alu -1 311 13 2806 191 7 51 chr2 224754465 224754539 -25933315 + MLT1F LTR MaLR 465 541 -1 2132 163 31 41 chr2 224755607 224756025 -25931829 + MLT2D LTR ERVL 1 414 0 1301 73 3 213 chr2 224756095 224756251 -25931603 - MER30 DNA MER1_type 0 230 43 1623 153 0 18 chr2 224756251 224756525 -25931329 - AluJo SINE Alu -1 311 43 2067 124 0 10 chr2 224756525 224756830 -25931024 - AluSg SINE Alu -5 305 2 1301 73 3 213 chr2 224756830 224756959 -25930895 - MER30 DNA MER1_type -185 45 4 590 263 29 86 chr2 224757050 224757180 -25930674 - MIR SINE MIR -1 261 150 2309 92 3 13 chr2 224757180 224757496 -25930358 - AluSp SINE Alu 0 313 1 590 263 29 86 chr2 224757496 224757608 -25930246 - MIR SINE MIR -112 150 33 412 267 27 53 chr2 224757810 224757960 -25929894 - MIR3 SINE MIR -45 163 18 357 82 0 0 chr2 224758500 224758549 -25929305 + (CA)n Simple_repeat Simple_repeat 1 49 0 410 306 25 38 chr2 224758790 224758950 -25928904 - MIR3 SINE MIR -34 174 17 271 292 169 0 chr2 224759554 224759643 -25928211 - MER91A DNA MER1_type -92 104 1 442 267 83 16 chr2 224760535 224760722 -25927132 + MIR SINE MIR 44 249 -13 287 349 124 48 chr2 224760797 224761322 -25926532 - L2 LINE L2 -351 2963 2399 254 189 35 47 chr2 224761689 224761858 -25925996 + (CA)n Simple_repeat Simple_repeat 1 167 0 209 217 39 44 chr2 224761874 224762054 -25925800 + (CA)n Simple_repeat Simple_repeat 2 180 0 673 321 24 10 chr2 224763207 224763497 -25924357 - L1ME3 LINE L1 -127 6035 5742 279 296 11 22 chr2 224764323 224764502 -25923352 + (CAGA)n Simple_repeat Simple_repeat 4 180 0 * 484 254 11 22 chr2 224764379 224764560 -25923294 + GA-rich Low_complexity Low_complexity 2 180 0 319 209 148 0 chr2 224764564 224764679 -25923175 + L1MC4 LINE L1 6894 7025 -1017 1662 157 6 22 chr2 224764716 224765029 -25922825 + MER7A DNA MER2_type 41 346 0 1948 243 80 14 chr2 224765042 224765667 -25922187 + L1MC4 LINE L1 7240 7905 -137 300 269 208 8 chr2 224766637 224766767 -25921087 + MIR3 SINE MIR 10 165 -43 322 282 86 31 chr2 224767086 224767249 -25920605 + L3 LINE CR1 1246 1417 -160 262 375 80 23 chr2 224768199 224768909 -25918945 + L2 LINE L2 2313 3062 -210 605 267 82 50 chr2 224769008 224769326 -25918528 - L1MC4 LINE L1 -255 7787 7460 549 265 41 6 chr2 224769413 224769583 -25918271 + MIR SINE MIR 84 259 -3 216 0 0 0 chr2 224769987 224770011 -25917843 + (TC)n Simple_repeat Simple_repeat 1 24 0 180 0 0 0 chr2 224770040 224770060 -25917794 + (TC)n Simple_repeat Simple_repeat 1 20 0 210 281 0 0 chr2 224770183 224770240 -25917614 - MIR SINE MIR -35 227 171 1590 190 7 0 chr2 224770290 224770564 -25917290 - AluJo SINE Alu -36 276 1 181 229 48 96 chr2 224770566 224770649 -25917205 + L2 LINE L2 2999 3077 -195 658 225 230 9 chr2 224771043 224771256 -25916598 - MIR SINE MIR 0 262 3 289 268 209 39 chr2 224771587 224771740 -25916114 - MIR3 SINE MIR -25 183 5 432 350 68 10 chr2 224772273 224772512 -25915342 - MIR SINE MIR -8 254 3 2157 127 0 9 chr2 224772635 224772950 -25914904 + AluSx SINE Alu 1 312 0 238 391 81 0 chr2 224773021 224773182 -25914672 - MIR SINE MIR -10 252 79 185 97 16 65 chr2 224774795 224774857 -25912997 + (TCC)n Simple_repeat Simple_repeat 1 59 0 207 283 0 0 chr2 224775373 224775419 -25912435 + polypyrimidine Low_complexity Low_complexity 3 48 0 241 319 14 29 chr2 224775529 224775667 -25912187 + C-rich Low_complexity Low_complexity 4 139 0 216 186 267 12 chr2 224777388 224777474 -25910380 + L2 LINE L2 3165 3272 0 354 216 78 10 chr2 224778032 224778134 -25909720 + MIR3 SINE MIR 90 198 -10 25 51 0 0 chr2 224778525 224778564 -25909290 + AT_rich Low_complexity Low_complexity 1 39 0 296 350 107 0 chr2 224778655 224778795 -25909059 - MIR3 SINE MIR -50 158 4 456 276 52 0 chr2 224779079 224779195 -25908659 - MIR SINE MIR -107 155 34 436 289 56 14 chr2 224779577 224779719 -25908135 + MER91A DNA MER1_type 49 196 0 933 250 47 4 chr2 224780661 224780897 -25906957 - MIR SINE MIR -14 248 3 224 208 21 0 chr2 224781101 224781149 -25906705 + C-rich Low_complexity Low_complexity 6 54 0 232 246 0 31 chr2 224781264 224781329 -25906525 + C-rich Low_complexity Low_complexity 4 66 0 21 36 0 0 chr2 224782141 224782169 -25905685 + GC_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 224782427 224782456 -25905398 + GC_rich Low_complexity Low_complexity 1 29 0 231 164 0 66 chr2 224783040 224783101 -25904753 + (CAGAGA)n Simple_repeat Simple_repeat 4 60 0 2189 103 0 26 chr2 224784717 224785029 -25902825 + AluSx SINE Alu 1 304 -8 312 322 110 51 chr2 224786341 224786596 -25901258 + L2 LINE L2 3043 3312 -1 603 84 0 0 chr2 224786604 224786699 -25901155 + (GGAA)n Simple_repeat Simple_repeat 4 98 0 432 196 45 0 chr2 224786931 224787054 -25900800 - MIR SINE MIR -60 148 20 197 128 0 26 chr2 224787090 224787129 -25900725 + (AGGGGG)n Simple_repeat Simple_repeat 1 38 0 505 270 8 89 chr2 224787217 224787465 -25900389 - L3b LINE CR1 -188 1395 1168 207 276 13 26 chr2 224787748 224787824 -25900030 + GA-rich Low_complexity Low_complexity 5 79 0 456 259 53 7 chr2 224789353 224789495 -25898359 + MIR SINE MIR 42 189 -62 2267 125 0 6 chr2 224790545 224790857 -25896997 + AluSg SINE Alu 1 310 0 301 307 0 58 chr2 224791764 224791901 -25895953 + HAL1 LINE L1 3 131 -2376 436 278 67 19 chr2 224792166 224792375 -25895479 + HAL1 LINE L1 134 352 -2155 317 260 52 21 chr2 224792504 224792600 -25895254 + HAL1 LINE L1 679 777 -1730 433 208 54 60 chr2 224792636 224792804 -25895050 + HAL1 LINE L1 910 1076 -1431 625 283 22 16 chr2 224794804 224794988 -25892866 - MIR3 SINE MIR -3 205 21 206 308 56 28 chr2 224795097 224795204 -25892650 + MIR SINE MIR 27 136 -72 382 281 222 5 chr2 224795524 224795709 -25892145 + MIR SINE MIR 21 245 -17 4749 231 31 48 chr2 224796014 224796541 -25891313 - MER65-int LTR ERV1 -694 4177 3643 2360 89 3 13 chr2 224796541 224796856 -25890998 + AluSq SINE Alu 1 312 -1 4749 231 31 48 chr2 224796856 224797855 -25889999 - MER65-int LTR ERV1 -1228 3643 2677 238 203 270 7 chr2 224797944 224798092 -25889762 - MER113 DNA MER1_type? -330 191 5 255 152 0 0 chr2 224798542 224798588 -25889266 + (CA)n Simple_repeat Simple_repeat 2 47 0 346 288 94 47 chr2 224799310 224799480 -25888374 + MIR3 SINE MIR 30 207 -1 225 191 24 0 chr2 224799597 224799639 -25888215 + MIR3 SINE MIR 139 181 -27 482 249 228 25 chr2 224799650 224799847 -25888007 - MIR SINE MIR -6 256 20 296 312 171 0 chr2 224800127 224800263 -25887591 - MIR SINE MIR -54 154 16 296 250 14 0 chr2 224801231 224801303 -25886551 + LTR16B LTR ERVL 1 73 -391 2037 126 0 3 chr2 224801307 224801601 -25886253 - AluSx SINE Alu -6 306 14 805 161 87 13 chr2 224801740 224801889 -25885965 - FRAM SINE Alu 0 176 17 262 307 126 22 chr2 224801925 224802156 -25885698 + LTR16B LTR ERVL 206 460 -4 280 227 45 34 chr2 224802240 224802328 -25885526 - MIR SINE MIR -126 136 48 267 293 145 41 chr2 224803402 224803644 -25884210 + L2 LINE L2 2819 3085 -187 207 321 69 46 chr2 224804535 224804666 -25883188 - L2 LINE L2 -16 3256 3123 1076 253 100 66 chr2 224805469 224805967 -25881887 + L1ME3A LINE L1 5644 6158 -12 521 260 188 45 chr2 224806309 224806644 -25881210 + L2 LINE L2 2931 3313 0 363 246 43 59 chr2 224806718 224806909 -25880945 + MIR3 SINE MIR 32 225 -37 686 210 3 0 chr2 224806909 224807217 -25880637 + (TG)n Simple_repeat Simple_repeat 1 309 0 640 172 6 6 chr2 224807250 224807430 -25880424 + (TG)n Simple_repeat Simple_repeat 1 180 0 628 186 11 0 chr2 224807464 224807641 -25880213 + (TG)n Simple_repeat Simple_repeat 1 179 0 182 194 28 0 chr2 224807720 224807756 -25880098 + L3 LINE CR1 1539 1575 -2 306 355 35 7 chr2 224811500 224811641 -25876213 - MIR3 SINE MIR -10 198 54 269 212 202 10 chr2 224811767 224811866 -25875988 - HAL1 LINE L1 -418 2089 1972 817 205 74 0 chr2 224811975 224812165 -25875689 - L1M4 LINE L1 -1450 4696 4493 1055 255 36 17 chr2 224812165 224812467 -25875387 - MER93a LTR ERV1 -14 388 81 257 223 58 48 chr2 224812545 224812648 -25875206 - MER31-int LTR ERV1 -464 7352 7249 845 220 120 85 chr2 224813136 224813668 -25874186 - MER31-int LTR ERV1 -201 4735 4185 3232 145 62 173 chr2 224813673 224814947 -25872907 - MER52A LTR ERV1 -13 1265 211 308 250 75 0 chr2 224814923 224815003 -25872851 - MER52A LTR ERV1 -1669 86 1 * 5390 82 6 17 chr2 224815150 224815958 -25871896 - L1PA13 LINE L1 0 6163 5365 322 177 16 0 chr2 224815958 224816020 -25871834 - MER31-int LTR ERV1 -939 5392 5330 * 2513 215 104 72 chr2 224816019 224816491 -25871363 - MER31-int LTR ERV1 -1282 5049 4594 2498 108 29 55 chr2 224816491 224816528 -25871326 - L1MA5A LINE L1 -17 6280 6244 2437 51 3 7 chr2 224816528 224816824 -25871030 - AluY SINE Alu -16 295 1 2498 108 29 55 chr2 224816824 224817239 -25870615 - L1MA5A LINE L1 -53 6244 5840 2513 215 104 72 chr2 224817239 224818374 -25869480 - MER31-int LTR ERV1 -1737 4594 2061 22 56 0 0 chr2 224818575 224818611 -25869243 + AT_rich Low_complexity Low_complexity 1 36 0 2026 128 63 0 chr2 224818723 224819296 -25868558 - L1P4 LINE L1 -550 5613 5010 497 242 20 61 chr2 224819359 224819557 -25868297 - HAL1 LINE L1 -2308 199 10 1216 160 80 25 chr2 224820022 224820208 -25867646 - L1M1 LINE L1 -4629 2936 2729 2360 97 0 19 chr2 224820208 224820527 -25867327 - AluSp SINE Alu 0 313 1 1216 160 80 25 chr2 224820527 224820615 -25867239 - L1M1 LINE L1 -4836 2729 2647 846 206 39 147 chr2 224820615 224821086 -25866768 + LTR28 LTR ERV1 1 1229 -137 225 163 0 0 chr2 224821325 224821368 -25866486 - L1M1 LINE L1 -4920 2645 2603 250 247 13 52 chr2 224821369 224821446 -25866408 + LTR57-int LTR ERVL 1089 1162 -4181 * 356 193 17 80 chr2 224821378 224821536 -25866318 + MER65C-int LTR ERV1 1458 3226 -3105 541 165 0 115 chr2 224821551 224821751 -25866103 + MER65C-int LTR ERV1 1340 1902 -4856 640 211 9 0 chr2 224821767 224821881 -25865973 - FLAM_C SINE Alu -16 127 13 347 236 51 25 chr2 224822030 224822187 -25865667 + MER65C-int LTR ERV1 1559 1719 -6401 180 0 0 0 chr2 224822288 224822308 -25865546 + (A)n Simple_repeat Simple_repeat 1 20 0 426 303 21 54 chr2 224822326 224822567 -25865287 + MER65C-int LTR ERV1 2939 3171 -1709 607 209 45 65 chr2 224822868 224823069 -25864785 + MER65C-int LTR ERV1 3536 3732 -2866 664 181 73 34 chr2 224823156 224823333 -25864521 + MER65C-int LTR ERV1 3730 3913 -2685 685 216 0 9 chr2 224823334 224823450 -25864404 + FLAM_A SINE Alu 1 115 -18 23 0 0 0 chr2 224823452 224823475 -25864379 + AT_rich Low_complexity Low_complexity 1 23 0 180 77 0 0 chr2 224823667 224823693 -25864161 + (TTA)n Simple_repeat Simple_repeat 2 27 0 803 225 0 0 chr2 224823707 224823858 -25863996 - AluJo SINE Alu -40 272 122 2393 220 124 45 chr2 224823858 224824066 -25863788 + MER65C-int LTR ERV1 2732 2922 -2014 1835 153 0 48 chr2 224824066 224824232 -25863622 - AluJb SINE Alu -13 299 153 2282 60 42 3 chr2 224824232 224824517 -25863337 - AluY SINE Alu -15 296 1 1835 153 0 48 chr2 224824517 224824664 -25863190 - AluJb SINE Alu -159 153 1 2393 220 124 45 chr2 224824664 224824992 -25862862 + MER65C-int LTR ERV1 2922 3223 -1713 2160 143 0 0 chr2 224824992 224825292 -25862562 + AluSx SINE Alu 1 300 -12 2393 220 124 45 chr2 224825292 224825737 -25862117 + MER65C-int LTR ERV1 3223 3792 -1144 252 216 175 28 chr2 224825777 224825844 -25862010 + MER65C-int LTR ERV1 4135 4133 -803 2144 122 0 0 chr2 224825844 224826130 -25861724 + AluSx SINE Alu 13 298 -14 252 216 175 28 chr2 224826130 224826205 -25861649 + MER65C-int LTR ERV1 4132 4195 -741 1573 264 62 31 chr2 224826243 224826755 -25861099 + MER65C-int LTR ERV1 3636 4163 -708 303 316 30 43 chr2 224826962 224827196 -25860658 + MER65C-int LTR ERV1 4495 4725 -146 1384 230 58 29 chr2 224827320 224827523 -25860331 + MER65C LTR ERV1 1 197 -264 2210 113 26 3 chr2 224827523 224827825 -25860029 + AluSx SINE Alu 1 309 -3 1384 230 58 29 chr2 224827825 224828069 -25859785 + MER65C LTR ERV1 197 461 0 1156 285 109 15 chr2 224828244 224828848 -25859006 - L1MB7 LINE L1 0 6184 5524 313 335 51 34 chr2 224828996 224829172 -25858682 - L1ME3A LINE L1 -1 6169 5991 488 286 6 22 chr2 224829236 224829414 -25858440 + MLT2F LTR ERVL 1 175 -488 344 212 20 30 chr2 224829822 224829921 -25857933 - MLT1L LTR MaLR 0 615 518 3351 189 14 58 chr2 224829971 224830424 -25857430 - L1MB4 LINE L1 0 6180 5776 180 0 0 0 chr2 224830424 224830444 -25857410 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 3351 189 14 58 chr2 224830444 224830790 -25857064 - L1MB4 LINE L1 -404 5776 5416 243 314 98 39 chr2 224832397 224832703 -25855151 - MARNA DNA Mariner -126 460 137 2471 69 0 23 chr2 224832837 224833142 -25854712 + AluY SINE Alu 1 298 -13 1951 127 11 3 chr2 224833150 224833471 -25854383 + AluSx SINE Alu 1 323 0 1249 178 39 12 chr2 224834045 224834304 -25853550 + L1M4 LINE L1 5445 5710 -474 204 132 0 26 chr2 224835976 224836014 -25851840 + (AGGGGG)n Simple_repeat Simple_repeat 3 39 0 1701 101 40 0 chr2 224836892 224837120 -25850734 - AluSq SINE Alu -2 311 75 364 304 104 30 chr2 225037130 225037570 -25650284 - L1M4 LINE L1 -768 5876 5404 1969 145 10 3 chr2 225037868 225038165 -25649689 + AluSx SINE Alu 1 299 -13 213 341 30 23 chr2 225038777 225038909 -25648945 - MIR SINE MIR -66 196 64 195 270 139 78 chr2 225038897 225038978 -25648876 + MIR SINE MIR 19 110 -152 * 2053 124 40 3 chr2 225038978 225039276 -25648578 + AluSx SINE Alu 2 310 -2 195 270 139 78 chr2 225039276 225039309 -25648545 + MIR SINE MIR 110 140 -122 2240 116 3 0 chr2 225039348 225039651 -25648203 + AluSq SINE Alu 3 306 -7 1436 201 77 37 chr2 225040206 225040555 -25647299 - MLT1A2 LTR MaLR -11 363 1 21 0 0 0 chr2 225040956 225040977 -25646877 + AT_rich Low_complexity Low_complexity 1 21 0 1816 166 0 14 chr2 225041515 225041804 -25646050 + AluJb SINE Alu 1 285 -27 703 230 155 5 chr2 225043060 225043273 -25644581 - L1MC/D LINE L1 -2133 5675 5431 2356 92 14 0 chr2 225043613 225043907 -25643947 - AluSx SINE Alu -14 298 1 2574 201 120 26 chr2 225043921 225044581 -25643273 - L1ME2 LINE L1 -10 6154 5433 1693 177 54 0 chr2 225044593 225044887 -25642967 - AluJb SINE Alu -2 310 1 377 278 0 9 chr2 225044891 225044999 -25642855 - L1M4 LINE L1 -1236 5408 5302 1647 118 0 0 chr2 225045045 225045266 -25642588 - AluSq SINE Alu -4 309 89 611 119 0 0 chr2 225045366 225045450 -25642404 - AluJ/FLAM SINE Alu -227 85 2 2318 88 3 10 chr2 225045637 225045932 -25641922 + AluSp SINE Alu 1 293 -20 1195 159 30 0 chr2 225046793 225046994 -25640860 - AluSx SINE Alu -105 207 1 925 225 38 0 chr2 225046999 225047212 -25640642 - L1M4 LINE L1 -2368 4276 4056 * 2376 218 40 22 chr2 225047193 225047790 -25640064 - L1M4 LINE L1 -3236 3408 2797 1509 183 9 69 chr2 225047790 225048069 -25639785 - AluJo SINE Alu -14 298 39 1973 123 38 10 chr2 225048069 225048362 -25639492 + AluSx SINE Alu 1 301 -11 1509 183 9 69 chr2 225048362 225048399 -25639455 - AluJo SINE Alu -273 39 1 2376 218 40 22 chr2 225048399 225048510 -25639344 - L1M4 LINE L1 -3847 2797 2689 549 86 0 0 chr2 225048512 225048582 -25639272 + AluS SINE Alu 2 71 -242 2092 122 0 17 chr2 225048583 225048877 -25638977 + AluSx SINE Alu 9 297 -15 468 194 48 0 chr2 225048877 225048980 -25638874 - L1M4 LINE L1 -3948 2698 2591 1204 94 5 5 chr2 225048985 225049192 -25638662 - L1PA15 LINE L1 -1 6164 5895 2028 147 0 0 chr2 225049192 225049491 -25638363 - AluSx SINE Alu -13 299 1 3144 208 47 45 chr2 225049499 225050587 -25637267 - L1M4 LINE L1 -4738 1908 817 620 126 0 101 chr2 225050629 225050707 -25637147 + FLAM_A SINE Alu 36 100 -211 2152 113 7 10 chr2 225050707 225051007 -25636847 - AluSx SINE Alu -13 299 1 620 126 0 101 chr2 225051007 225051047 -25636807 + FLAM_A SINE Alu 100 142 -169 435 285 186 17 chr2 225051165 225051456 -25636398 - L1M4 LINE L1 -6030 616 277 740 256 132 72 chr2 225051468 225051953 -25635901 - LTR33 LTR ERVL -3 518 5 469 271 167 0 chr2 225052136 225052280 -25635574 - MER5A DNA MER1_type -1 188 21 540 269 68 32 chr2 225052283 225052532 -25635322 + HAL1 LINE L1 765 1022 -1485 2585 51 0 0 chr2 225052632 225052943 -25634911 + L1PA3 LINE L1 5845 6155 0 1917 247 115 55 chr2 225052954 225053724 -25634130 + HAL1 LINE L1 1529 2251 -256 1611 193 4 4 chr2 225053724 225054004 -25633850 + AluJb SINE Alu 1 280 -32 621 61 0 0 chr2 225054004 225054086 -25633768 + (GAAA)n Simple_repeat Simple_repeat 4 85 0 1917 247 115 55 chr2 225054086 225054194 -25633660 + HAL1 LINE L1 2250 2461 -46 1725 160 23 10 chr2 225054269 225054569 -25633285 + AluJb SINE Alu 1 304 -8 2258 99 0 3 chr2 225054569 225054863 -25632991 + AluSg SINE Alu 1 293 -17 417 254 169 8 chr2 225055548 225055666 -25632188 + L2 LINE L2 3136 3272 0 192 77 0 0 chr2 225056182 225056208 -25631646 + (CGG)n Simple_repeat Simple_repeat 3 28 0 25 65 0 0 chr2 225056517 225056563 -25631291 + GC_rich Low_complexity Low_complexity 1 46 0 1946 112 30 0 chr2 225058344 225058612 -25629242 - AluSx SINE Alu -14 298 23 867 157 99 5 chr2 225059305 225059496 -25628358 - MER3 DNA MER1_type 0 209 1 198 287 104 26 chr2 225060549 225060664 -25627190 + L2 LINE L2 3149 3272 0 2203 111 3 0 chr2 225060970 225061268 -25626586 + AluSx SINE Alu 1 299 -13 205 233 0 0 chr2 225061692 225061735 -25626119 - L2 LINE L2 -19 3253 3211 393 127 0 0 chr2 225062066 225062121 -25625733 + Tigger7 DNA MER2_type 1 55 -2432 2339 102 0 0 chr2 225062237 225062530 -25625324 + AluSg SINE Alu 1 293 -17 258 250 29 0 chr2 225062530 225062598 -25625256 + L1MC5 LINE L1 7839 7908 -53 1940 149 0 7 chr2 225064090 225064386 -25623468 - AluSx SINE Alu -18 294 1 1847 154 6 28 chr2 225064394 225064713 -25623141 - AluJb SINE Alu 0 312 1 420 180 0 167 chr2 225064831 225064981 -25622873 + FLAM_A SINE Alu 6 130 -12 745 155 0 0 chr2 225065937 225066053 -25621801 + FLAM_C SINE Alu 2 117 -16 22 25 0 25 chr2 225066054 225066072 -25621782 + AT_rich Low_complexity Low_complexity 1 18 -21 2287 102 0 3 chr2 225066072 225066367 -25621487 + AluSx SINE Alu 1 294 -18 22 25 0 25 chr2 225066367 225066388 -25621466 + AT_rich Low_complexity Low_complexity 18 39 0 599 108 0 0 chr2 225066558 225066641 -25621213 - AluY SINE Alu -226 84 2 556 213 75 48 chr2 225066641 225066781 -25621073 - MSTD LTR MaLR -203 193 45 1529 140 0 160 chr2 225066781 225067131 -25620723 + AluSx SINE Alu 1 294 -18 556 213 75 48 chr2 225067131 225067178 -25620676 - MSTD LTR MaLR -351 45 1 1947 117 0 15 chr2 225067649 225067915 -25619939 + AluSp SINE Alu 1 262 -51 1334 174 6 98 chr2 225068953 225069269 -25618585 - AluJo SINE Alu -24 288 2 1856 167 0 7 chr2 225069574 225069873 -25617981 + AluSx SINE Alu 3 299 -13 2259 102 3 0 chr2 225070277 225070572 -25617282 + AluSp SINE Alu 1 296 -17 2378 84 10 0 chr2 225071372 225071669 -25616185 - AluSp SINE Alu -13 300 1 2325 88 0 0 chr2 225071748 225072031 -25615823 - AluSc SINE Alu -26 283 1 2257 75 7 10 chr2 225072388 225072681 -25615173 + AluSq SINE Alu 1 292 -21 1289 138 5 5 chr2 225073017 225073206 -25614648 + Tigger7 DNA MER2_type 219 407 -326 475 195 0 0 chr2 225073227 225073304 -25614550 + Tigger7 DNA MER2_type 2511 2587 0 386 248 72 16 chr2 225073313 225073438 -25614416 - MIR SINE MIR -59 203 72 2099 124 16 0 chr2 225075733 225076040 -25611814 + AluSx SINE Alu 1 312 0 2374 81 7 0 chr2 225076072 225076370 -25611484 + AluY SINE Alu 5 304 -7 344 204 102 0 chr2 225076999 225077087 -25610767 + L1MC5 LINE L1 7479 7575 -386 1002 137 0 18 chr2 225077146 225077314 -25610540 - AluSg/x SINE Alu -14 298 134 2167 102 0 26 chr2 225077314 225077619 -25610235 - AluSx SINE Alu -15 297 1 726 188 49 54 chr2 225077620 225077844 -25610010 + L1MC5 LINE L1 7623 7845 -116 422 86 0 215 chr2 225079550 225079643 -25608211 + tRNA-Tyr-TAC tRNA tRNA 1 73 -3 2045 123 3 20 chr2 225079658 225079958 -25607896 + AluSc SINE Alu 1 295 -14 2167 114 0 23 chr2 225079965 225080271 -25607583 + AluSx SINE Alu 1 299 -13 1669 182 10 7 chr2 225080283 225080413 -25607441 + AluJb SINE Alu 1 129 -183 1689 150 45 28 chr2 225080413 225080699 -25607155 + AluSx SINE Alu 1 291 -21 1669 182 10 7 chr2 225080699 225080859 -25606995 + AluJb SINE Alu 129 292 -20 347 122 0 0 chr2 225081305 225081366 -25606488 - Alu SINE Alu -257 45 1 * 629 200 55 7 chr2 225081366 225081506 -25606348 + MER104 DNA Tc2 34 180 0 2236 110 0 3 chr2 225081742 225082032 -25605822 - AluSx SINE Alu -23 289 1 2223 105 0 10 chr2 225083655 225083951 -25603903 + AluSg1 SINE Alu 4 296 -13 203 146 49 0 chr2 225084102 225084143 -25603711 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 419 298 104 23 chr2 225084641 225084927 -25602927 - L2 LINE L2 -220 3052 2744 210 301 105 15 chr2 225085019 225085152 -25602702 + MER5B DNA MER1_type 20 164 -14 335 229 92 28 chr2 225085028 225085137 -25602717 - MER5A DNA MER1_type -28 161 46 199 220 17 17 chr2 225085870 225085929 -25601925 + MIR SINE MIR 96 154 -108 2324 64 11 0 chr2 225085977 225086286 -25601568 + AluSp SINE Alu 1 312 0 390 274 108 77 chr2 225086531 225087023 -25600831 + MLT1J LTR MaLR 3 509 -2 291 149 184 105 chr2 225087043 225087157 -25600697 + MER113 DNA MER1_type? 5 127 -394 299 238 62 88 chr2 225087838 225087956 -25599898 + L1MC4a LINE L1 5769 5884 -1924 2001 143 17 0 chr2 225087956 225088243 -25599611 + AluSx SINE Alu 1 292 -20 299 238 62 88 chr2 225088243 225088284 -25599570 + L1MC4a LINE L1 5883 5924 -1884 356 288 82 69 chr2 225088612 225088845 -25599009 + L1MC4a LINE L1 5003 5238 -908 590 271 101 63 chr2 225088851 225089010 -25598844 + L1MC4a LINE L1 5287 5438 -2370 2274 120 0 9 chr2 225089010 225089326 -25598528 + AluSq SINE Alu 1 313 0 590 271 101 63 chr2 225089326 225089709 -25598145 + L1MC4a LINE L1 5438 5850 -1958 344 302 43 0 chr2 225089805 225089857 -25597997 + L1ME4a LINE L1 5997 6045 -76 2448 100 3 0 chr2 225089857 225090168 -25597686 - AluSp SINE Alu -1 312 1 344 302 43 0 chr2 225090168 225090231 -25597623 + L1ME4a LINE L1 6045 6117 -4 187 347 42 47 chr2 225090454 225090667 -25597187 + L2 LINE L2 1435 1646 -1668 243 0 45 45 chr2 225090673 225090717 -25597137 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 2132 130 17 0 chr2 225090955 225091254 -25596600 + AluSx SINE Alu 7 310 -2 304 264 143 106 chr2 225091410 225092146 -25595708 + L2 LINE L2 1722 2484 -830 410 223 99 8 chr2 225092153 225092274 -25595580 + MLT1E LTR MaLR 1 132 -461 2335 109 0 0 chr2 225092274 225092567 -25595287 + AluSx SINE Alu 1 293 -19 834 64 0 0 chr2 225092568 225092677 -25595177 + (TA)n Simple_repeat Simple_repeat 2 110 0 433 241 62 0 chr2 225092718 225092830 -25595024 + MLT1E LTR MaLR 119 237 -356 2224 116 7 0 chr2 225093260 225093563 -25594291 + AluSg SINE Alu 1 305 -5 276 157 0 45 chr2 225093843 225093932 -25593922 + GA-rich Low_complexity Low_complexity 2 86 0 1366 231 26 0 chr2 225094425 225094728 -25593126 + MLT1E LTR MaLR 280 590 -3 1741 166 18 4 chr2 225094862 225095164 -25592690 + AluJo SINE Alu 1 306 0 625 128 0 0 chr2 225095330 225095424 -25592430 - AluSg/x SINE Alu -7 305 212 1076 189 5 15 chr2 225095593 225095789 -25592065 + AluJo SINE Alu 2 195 -117 1687 155 41 35 chr2 225095789 225096079 -25591775 - AluJb SINE Alu -20 292 1 1054 219 0 0 chr2 225096101 225096297 -25591557 + AluJo SINE Alu 1 196 -116 24 0 0 0 chr2 225096297 225096321 -25591533 + AT_rich Low_complexity Low_complexity 1 24 0 1657 182 10 16 chr2 225096321 225096628 -25591226 + AluJb SINE Alu 1 305 -7 365 267 134 0 chr2 225096644 225096816 -25591038 + HAL1 LINE L1 1249 1443 -1064 1432 199 66 49 chr2 225096831 225097299 -25590555 + L1M4 LINE L1 4229 4704 -1442 873 253 132 71 chr2 225097309 225097738 -25590116 + HAL1 LINE L1 1849 2329 -178 1957 128 24 24 chr2 225097738 225098036 -25589818 + AluSx SINE Alu 1 298 -14 873 253 132 71 chr2 225098036 225098227 -25589627 + HAL1 LINE L1 2329 2507 0 1898 177 0 3 chr2 225099215 225099515 -25588339 + AluJb SINE Alu 3 301 -11 297 190 0 0 chr2 225100450 225100508 -25587346 + MLT1K LTR MaLR 524 581 -7 279 271 156 0 chr2 225100672 225100768 -25587086 - L2 LINE L2 0 3313 3203 247 333 20 72 chr2 225103977 225104011 -25583843 + MIR3 SINE MIR 54 88 -120 2038 100 0 8 chr2 225104011 225104297 -25583557 + AluSg SINE Alu 24 307 0 247 333 20 72 chr2 225104297 225104414 -25583440 + MIR3 SINE MIR 88 198 -10 217 186 0 0 chr2 225105907 225105950 -25581904 + L2 LINE L2 3270 3312 -1 1660 187 0 35 chr2 225106212 225106402 -25581452 - AluJo SINE Alu -13 299 123 197 33 33 0 chr2 225106402 225106432 -25581422 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1660 187 0 35 chr2 225106432 225106551 -25581303 - AluJo SINE Alu -189 123 1 531 286 65 33 chr2 225107814 225108059 -25579795 + MLT1K LTR MaLR 319 571 -17 26 30 0 0 chr2 225108285 225108318 -25579536 + AT_rich Low_complexity Low_complexity 1 33 0 28 29 0 0 chr2 225108329 225108364 -25579490 + AT_rich Low_complexity Low_complexity 1 35 0 1838 166 3 33 chr2 225108364 225108671 -25579183 + AluJo SINE Alu 1 298 -14 1187 204 9 0 chr2 225108674 225108895 -25578959 + AluJo SINE Alu 87 309 -3 229 238 48 16 chr2 225108975 225109038 -25578816 + MIR SINE MIR 31 95 -167 256 213 49 16 chr2 225109160 225109221 -25578633 + MIR SINE MIR 122 184 -78 796 235 83 15 chr2 225109235 225109439 -25578415 + MIR SINE MIR 39 256 -6 1370 160 5 5 chr2 225109543 225109762 -25578092 - AluJo SINE Alu -7 305 87 423 0 0 0 chr2 225109773 225109820 -25578034 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 536 135 21 0 chr2 225109905 225110001 -25577853 + GA-rich Low_complexity Low_complexity 3 100 0 617 278 105 20 chr2 225110006 225110398 -25577456 + L1ME4a LINE L1 5697 6121 0 1933 150 24 0 chr2 225110408 225110701 -25577153 + AluSx SINE Alu 3 302 -10 188 299 138 23 chr2 225111033 225111120 -25576734 + L2 LINE L2 3138 3234 -38 628 212 15 0 chr2 225111125 225111257 -25576597 + MER45C DNA AcHobo 16 149 -804 839 163 0 8 chr2 225111258 225111387 -25576467 + FLAM_C SINE Alu 2 129 -4 2366 90 0 0 chr2 225111398 225111687 -25576167 + AluSg SINE Alu 2 290 -20 264 259 102 37 chr2 225111721 225111829 -25576025 + MER45C DNA AcHobo 152 266 -687 1481 149 117 72 chr2 225111851 225112280 -25575574 - LTR7 LTR ERV1 -2 448 1 2258 108 45 13 chr2 225112280 225112660 -25575194 - HERVH LTR ERV1 0 7713 7322 1196 147 18 9 chr2 225112658 225112876 -25574978 - HERVH LTR ERV1 -1894 5819 5600 * 4256 138 1 1 chr2 225112877 225113538 -25574316 - HERVH LTR ERV1 -2564 5149 4489 3321 107 4 6 chr2 225113541 225114044 -25573810 - HERVH LTR ERV1 -3720 3993 3492 867 142 20 0 chr2 225114034 225114182 -25573672 - HERVH LTR ERV1 -4423 3290 3140 * 15947 102 24 25 chr2 225114176 225117288 -25570566 - HERVH LTR ERV1 -4726 2987 1 1579 166 93 49 chr2 225117290 225117719 -25570135 - LTR7 LTR ERV1 -2 448 1 391 224 12 0 chr2 225117772 225117857 -25569997 + MER45C DNA AcHobo 722 807 -146 5065 95 13 1 chr2 225118513 225119196 -25568658 - LTR8 LTR ERV1 0 691 1 189 74 0 0 chr2 225119928 225119955 -25567899 + (CA)n Simple_repeat Simple_repeat 2 28 0 2030 151 3 0 chr2 225120034 225120325 -25567529 + AluJb SINE Alu 1 292 -20 30 0 0 24 chr2 225120325 225120354 -25567500 + AT_rich Low_complexity Low_complexity 1 30 -10 2345 111 0 3 chr2 225120354 225120661 -25567193 + AluSg SINE Alu 1 306 -4 30 0 0 24 chr2 225120661 225120672 -25567182 + AT_rich Low_complexity Low_complexity 30 40 0 241 217 33 0 chr2 225120672 225120732 -25567122 + MER45C DNA AcHobo 892 953 0 872 271 66 25 chr2 225120808 225121125 -25566729 + L2 LINE L2 2400 2729 -585 1769 201 157 91 chr2 225121274 225121969 -25565885 - LTR1B LTR ERV1 -85 741 1 1749 205 30 10 chr2 225122024 225122428 -25565426 + L1MD3 LINE L1 7418 7829 -166 303 250 14 0 chr2 225122447 225122519 -25565335 - Tigger5 DNA MER2_type 0 2323 2251 770 165 0 8 chr2 225122590 225122717 -25565137 + FLAM_C SINE Alu 2 127 -6 506 231 0 0 chr2 225122811 225122915 -25564939 - U13 snRNA snRNA 0 104 1 254 230 27 0 chr2 225122919 225122993 -25564861 - L1M4 LINE L1 -2281 3865 3790 254 273 59 81 chr2 225123010 225123097 -25564757 + L2 LINE L2 2770 2857 -456 2482 152 37 22 chr2 225123097 225123557 -25564297 - MLT1C LTR MaLR 0 467 1 254 273 59 81 chr2 225123557 225123876 -25563978 + L2 LINE L2 2857 3172 -141 1263 206 0 5 chr2 225125245 225125459 -25562395 - AluJb SINE Alu -98 214 2 1008 225 53 4 chr2 225125980 225126224 -25561630 - L1MD2 LINE L1 -11 6348 6093 403 217 191 6 chr2 225126225 225126382 -25561472 - MER112 DNA MER1_type -72 188 3 454 177 212 35 chr2 225126614 225126727 -25561127 - FLAM_A SINE Alu 0 133 1 687 173 16 47 chr2 225126961 225127088 -25560766 + FLAM_C SINE Alu 2 124 -19 2400 69 17 0 chr2 225127095 225127386 -25560468 + AluSq SINE Alu 1 296 -17 1428 144 14 0 chr2 225127395 225127603 -25560251 + AluJb SINE Alu 86 296 -16 347 250 152 0 chr2 225127895 225128027 -25559827 + MIR SINE MIR 52 203 -59 2088 113 17 0 chr2 225128597 225128610 -25559244 - AluSx SINE Alu -14 298 287 342 0 0 0 chr2 225128610 225128648 -25559206 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 2088 113 17 0 chr2 225128648 225128927 -25558927 - AluSx SINE Alu -25 287 1 2044 113 50 0 chr2 225128985 225129268 -25558586 - AluSx SINE Alu -15 297 1 1274 176 8 5 chr2 225129272 225129522 -25558332 - AluJb SINE Alu -7 305 19 189 273 10 71 chr2 225130420 225130519 -25557335 - L3b LINE CR1 -187 1396 1304 457 256 133 41 chr2 225130804 225130999 -25556855 - MIR SINE MIR -35 227 15 295 257 71 43 chr2 225131053 225131193 -25556661 - MIR SINE MIR -35 227 84 410 228 289 6 chr2 225133052 225133232 -25554622 - MER102b DNA MER1_type -33 308 78 246 264 42 0 chr2 225138013 225138085 -25549769 + L2 LINE L2 3191 3265 -7 2499 88 0 0 chr2 225138630 225138936 -25548918 - AluSg SINE Alu -3 307 2 2243 116 0 10 chr2 225139010 225139312 -25548542 - AluSx SINE Alu -13 299 1 2282 96 0 0 chr2 225139365 225139667 -25548187 - AluSg SINE Alu -8 302 1 1058 82 0 0 chr2 225139668 225139803 -25548051 - AluSq/x SINE Alu -178 135 1 619 271 54 0 chr2 225141547 225141713 -25546141 + MIR3 SINE MIR 17 191 -17 226 196 87 0 chr2 225142707 225142753 -25545101 - MIR SINE MIR -96 166 117 287 292 134 29 chr2 225142964 225143135 -25544719 - L2 LINE L2 -469 2845 2657 1170 146 0 5 chr2 225143930 225144122 -25543732 - AluSg/x SINE Alu -1 311 121 2056 102 0 57 chr2 225144136 225144468 -25543386 - AluSq SINE Alu 0 313 1 208 346 87 24 chr2 225146344 225146471 -25541383 - L2 LINE L2 -2 3270 3136 381 315 25 25 chr2 225148844 225149006 -25538848 + MIR SINE MIR 34 195 -67 2197 93 33 3 chr2 225151471 225151773 -25536081 - AluSq SINE Alu -2 311 1 2282 92 0 10 chr2 225151793 225152107 -25535747 - AluSx SINE Alu -1 311 1 318 248 162 9 chr2 225152108 225152213 -25535641 + MARNA DNA Mariner 237 357 -229 282 302 48 43 chr2 225153872 225154045 -25533809 - MIR3 SINE MIR -24 184 3 217 206 85 128 chr2 225154388 225154529 -25533325 + L3b LINE CR1 1195 1329 -254 2101 128 3 0 chr2 225154555 225154853 -25533001 + AluSg SINE Alu 1 299 -11 228 273 23 34 chr2 225154922 225155010 -25532844 + MIR3 SINE MIR 119 205 -3 456 254 17 104 chr2 225155369 225155479 -25532375 + MIR SINE MIR 102 193 -69 2127 120 3 0 chr2 225155479 225155780 -25532074 + AluSx SINE Alu 1 302 -10 456 254 17 104 chr2 225155780 225155842 -25532012 + MIR SINE MIR 193 259 -3 * 601 269 44 16 chr2 225155838 225156020 -25531834 - MIR SINE MIR -64 198 12 856 110 47 0 chr2 225156880 225157007 -25530847 - AluSq/x SINE Alu -179 133 1 227 221 221 0 chr2 225157841 225157909 -25529945 - MIR3 SINE MIR -14 194 112 1906 119 0 14 chr2 225158098 225158392 -25529462 + AluSc SINE Alu 1 290 -19 2328 79 0 3 chr2 225158817 225159121 -25528733 + AluY SINE Alu 1 303 -8 1081 155 42 0 chr2 225159191 225159384 -25528470 + MER46A DNA MER2_type 1 201 -35 327 324 61 47 chr2 225159530 225159727 -25528127 - MIR SINE MIR -50 212 16 218 270 170 20 chr2 225159910 225160010 -25527844 + MIR SINE MIR 30 144 -64 2176 77 49 0 chr2 225160030 225160317 -25527537 + AluSx SINE Alu 1 301 -11 487 172 121 9 chr2 225160849 225160965 -25526889 - MER103 DNA DNA -20 146 18 232 250 0 0 chr2 225161464 225161516 -25526338 - L3 LINE CR1 -2 1575 1524 189 227 30 45 chr2 225161601 225161667 -25526187 - L3 LINE CR1 -235 1342 1278 21 95 0 0 chr2 225163218 225163281 -25524573 + GC_rich Low_complexity Low_complexity 1 63 0 318 298 91 12 chr2 225163482 225163724 -25524130 - L1ME4a LINE L1 -171 5950 5690 757 168 7 21 chr2 225163967 225164110 -25523744 + AluJo SINE Alu 3 143 -169 1694 151 48 3 chr2 225164247 225164417 -25523437 - AluSx SINE Alu -7 305 115 250 24 0 49 chr2 225164417 225164458 -25523396 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1694 151 48 3 chr2 225164458 225164579 -25523275 - AluSx SINE Alu -197 115 1 198 0 0 0 chr2 225164594 225164616 -25523238 + (A)n Simple_repeat Simple_repeat 1 22 0 1697 197 24 51 chr2 225164947 225165165 -25522689 - MLT1A1 LTR MaLR 0 365 160 1646 172 54 0 chr2 225165165 225165444 -25522410 - AluJb SINE Alu -18 294 1 1697 197 24 51 chr2 225165444 225165600 -25522254 - MLT1A1 LTR MaLR -205 160 1 287 265 65 132 chr2 225165901 225166241 -25521613 - L2 LINE L2 -6 3266 2950 632 179 41 87 chr2 225166446 225166511 -25521343 + MER53 DNA DNA 1 67 -122 1921 139 0 10 chr2 225166511 225166814 -25521040 - AluJb SINE Alu -12 300 1 632 179 41 87 chr2 225166814 225166944 -25520910 + MER53 DNA DNA 67 187 -2 2077 131 3 0 chr2 225167333 225167639 -25520215 - AluSx SINE Alu 0 312 6 2092 112 6 10 chr2 225168068 225168381 -25519473 + AluSx SINE Alu 1 312 0 2253 79 3 0 chr2 225168400 225168691 -25519163 + AluY SINE Alu 17 308 -3 218 298 106 57 chr2 225168889 225169030 -25518824 + MER5B DNA MER1_type 2 149 -29 460 260 96 28 chr2 225169048 225169225 -25518629 + MIR SINE MIR 31 219 -43 1225 237 232 15 chr2 225169607 225169770 -25518084 + L2 LINE L2 800 926 -2388 2049 95 0 37 chr2 225169770 225170108 -25517746 - AluSq SINE Alu 0 327 1 1802 148 7 13 chr2 225170110 225170278 -25517576 - AluJo SINE Alu -9 303 136 2355 71 3 10 chr2 225170278 225170587 -25517267 - AluSp SINE Alu -6 307 1 1802 148 7 13 chr2 225170587 225170723 -25517131 - AluJo SINE Alu -176 136 1 1225 237 232 15 chr2 225170723 225171090 -25516764 + L2 LINE L2 926 1450 -1864 221 288 0 0 chr2 225171110 225171169 -25516685 - MER5A DNA MER1_type -3 186 128 2280 100 3 0 chr2 225171200 225171511 -25516343 - AluSx SINE Alu 0 312 1 470 192 242 0 chr2 225171518 225171716 -25516138 - MER3 DNA MER1_type 0 2456 2211 524 27 14 0 chr2 225171726 225171799 -25516055 - MER41A LTR ERV1 -81 473 400 649 169 24 0 chr2 225171808 225171932 -25515922 - MER3 DNA MER1_type -87 122 43 1400 180 26 22 chr2 225172172 225172483 -25515371 + AluJo SINE Alu 1 312 0 492 301 57 103 chr2 225172515 225172734 -25515120 - L2 LINE L2 -4 3268 3041 2136 97 3 0 chr2 225172734 225173033 -25514821 + AluY SINE Alu 1 300 -11 492 301 57 103 chr2 225173033 225173340 -25514514 - L2 LINE L2 -231 3041 2764 844 125 0 8 chr2 225173343 225173471 -25514383 - MER4E LTR ERV1 0 766 640 449 141 90 0 chr2 225173509 225173587 -25514267 - MER4D LTR ERV1 -237 666 582 1789 121 7 30 chr2 225173588 225173913 -25513941 - AluSx SINE Alu 0 312 1 583 49 29 69 chr2 225173913 225174015 -25513839 - MER4B LTR ERV1 -512 98 1 306 321 30 42 chr2 225174017 225174182 -25513672 - L2 LINE L2 -559 2755 2593 2351 83 3 0 chr2 225174238 225174540 -25513314 - AluSg1 SINE Alu -6 303 1 406 282 122 17 chr2 225174565 225174819 -25513035 + LTR33 LTR ERVL 6 232 -289 2136 89 34 0 chr2 225174819 225175110 -25512744 - AluSq SINE Alu -12 301 1 406 282 122 17 chr2 225175110 225175299 -25512555 + LTR33 LTR ERVL 232 514 -7 2205 96 7 0 chr2 225175459 225175760 -25512094 + AluSx SINE Alu 1 303 -9 204 289 44 61 chr2 225175888 225176002 -25511852 - L2 LINE L2 -12 3260 3149 1531 176 13 33 chr2 225176023 225176324 -25511530 - AluJo SINE Alu -17 295 1 244 401 85 0 chr2 225177108 225177320 -25510534 - MIR SINE MIR 0 262 33 1065 154 0 5 chr2 225177545 225177733 -25510121 - Tigger5 DNA MER2_type 0 2323 2137 3313 139 33 17 chr2 225177834 225178352 -25509502 - MER1A DNA MER1_type 0 527 2 25 0 0 0 chr2 225178706 225178731 -25509123 + AT_rich Low_complexity Low_complexity 1 25 0 476 305 117 24 chr2 225178731 225178855 -25508999 - L1ME4a LINE L1 -11 6110 5999 1933 131 13 13 chr2 225178855 225179153 -25508701 - AluSg SINE Alu -12 298 1 476 305 117 24 chr2 225179153 225179241 -25508613 - L1ME4a LINE L1 -122 5999 5878 2073 106 13 3 chr2 225179249 225179551 -25508303 - AluSx SINE Alu -7 305 1 281 132 0 19 chr2 225179559 225179612 -25508242 + (TTTC)n Simple_repeat Simple_repeat 4 55 0 332 253 16 0 chr2 225179622 225179715 -25508139 - AluJb SINE Alu -51 251 179 * 335 124 29 39 chr2 225179687 225179764 -25508090 + AluSg SINE Alu 58 132 -168 627 190 0 0 chr2 225179765 225179865 -25507989 - AluJb SINE Alu -111 201 102 1576 108 13 9 chr2 225179881 225180113 -25507741 + AluSg/x SINE Alu 78 310 0 643 142 94 0 chr2 225180128 225180234 -25507620 - AluSq/x SINE Alu -195 117 2 572 205 184 75 chr2 225180269 225180317 -25507537 - MLT1L LTR MaLR -1 614 573 2133 98 7 10 chr2 225180317 225180623 -25507231 + AluSx SINE Alu 1 305 -7 572 205 184 75 chr2 225180623 225180813 -25507041 - MLT1L LTR MaLR -42 573 350 2286 97 0 3 chr2 225180877 225181188 -25506666 - AluSg SINE Alu 0 310 1 1391 161 154 3 chr2 225181189 225181251 -25506603 + MER7A DNA MER2_type 13 64 -2974 2194 98 0 7 chr2 225181251 225181556 -25506298 - AluSx SINE Alu -5 307 5 1391 161 154 3 chr2 225181556 225181785 -25506069 + MER7A DNA MER2_type 64 346 0 457 292 31 42 chr2 225181849 225181928 -25505926 + MIR SINE MIR 73 151 -111 3785 190 40 55 chr2 225181928 225182897 -25504957 - LTR5 LTR ERVK -14 955 1 457 292 31 42 chr2 225182897 225183009 -25504845 + MIR SINE MIR 151 262 0 381 229 166 68 chr2 225183015 225183220 -25504634 - MLT1L LTR MaLR -390 225 1 1949 152 0 0 chr2 225183257 225183559 -25504295 + AluSx SINE Alu 1 302 -10 502 193 46 107 chr2 225183604 225183776 -25504078 - L1MD3 LINE L1 0 7995 7845 2038 113 7 23 chr2 225183776 225184077 -25503777 - AluSx SINE Alu -16 296 1 502 193 46 107 chr2 225184077 225184184 -25503670 - L1MD3 LINE L1 -150 7845 7733 416 319 87 19 chr2 225184237 225184560 -25503294 - L1ME LINE L1 -363 5758 5414 2235 81 0 46 chr2 225184562 225184885 -25502969 - AluSp SINE Alu -1 312 5 1800 130 14 4 chr2 225184889 225185165 -25502689 - AluJo SINE Alu -9 303 25 255 114 0 0 chr2 225185314 225185349 -25502505 + U2 snRNA snRNA 1 35 -153 1842 139 10 3 chr2 225185359 225185653 -25502201 - AluSx SINE Alu -13 299 4 1981 71 7 58 chr2 225185661 225186123 -25501731 - AluSc SINE Alu 0 447 1 353 274 63 79 chr2 225186295 225186485 -25501369 - L1ME LINE L1 -1050 5096 4910 304 244 106 2 chr2 225186526 225186637 -25501217 - MLT1G1 LTR MaLR -13 582 406 261 264 91 27 chr2 225186722 225186832 -25501022 - MLT1H LTR MaLR -432 117 1 2317 99 0 3 chr2 225186924 225187237 -25500617 - AluSx SINE Alu 0 312 1 228 286 148 35 chr2 225187701 225187904 -25499950 - L2 LINE L2 -2395 919 694 * 473 299 15 0 chr2 225187893 225188027 -25499827 + MER5A DNA MER1_type 54 189 0 264 167 0 0 chr2 225188652 225188700 -25499154 + (CAT)n Simple_repeat Simple_repeat 3 50 0 656 309 102 4 chr2 225189288 225189553 -25498301 - L2 LINE L2 0 3313 3023 2305 103 0 0 chr2 225189609 225189919 -25497935 - AluSg SINE Alu 0 310 1 1008 153 47 60 chr2 225189975 225190032 -25497822 - MER20 DNA MER1_type -7 212 156 2227 120 0 0 chr2 225190032 225190340 -25497514 - AluSg SINE Alu -2 308 1 1008 153 47 60 chr2 225190340 225190497 -25497357 - MER20 DNA MER1_type -63 156 1 225 195 0 0 chr2 225190504 225190545 -25497309 - L1ME3 LINE L1 -85 6077 6037 384 291 127 16 chr2 225190547 225190795 -25497059 - L2 LINE L2 -234 3038 2771 235 368 11 11 chr2 225190793 225190888 -25496966 - L2 LINE L2 -9 3263 3169 * 1437 71 0 0 chr2 225190904 225191087 -25496767 - L1MA5 LINE L1 -3 6297 6115 940 133 0 33 chr2 225191098 225191249 -25496605 + FRAM SINE Alu 11 156 -20 240 354 128 20 chr2 225191310 225191505 -25496349 - L2 LINE L2 -211 3061 2846 2133 87 10 7 chr2 225192290 225192590 -25495264 - AluSc SINE Alu -8 301 1 2122 80 48 0 chr2 225192599 225192888 -25494966 - AluSp SINE Alu -10 303 1 454 295 87 75 chr2 225193180 225193526 -25494328 + L2 LINE L2 2964 3313 0 26 0 0 0 chr2 225193858 225193884 -25493970 + GC_rich Low_complexity Low_complexity 1 26 0 2336 89 0 3 chr2 225195319 225195632 -25492222 + AluSx SINE Alu 1 312 0 222 37 0 0 chr2 225195659 225195686 -25492168 + (T)n Simple_repeat Simple_repeat 1 27 0 549 87 0 0 chr2 225195786 225195855 -25491999 - Alu SINE Alu -15 297 229 839 114 0 0 chr2 225195860 225195974 -25491880 - AluSg SINE Alu -196 114 1 2151 114 0 10 chr2 225195974 225196281 -25491573 - AluSg SINE Alu -6 304 1 728 304 67 8 chr2 225197160 225197400 -25490454 + MIR SINE MIR 1 254 -8 318 198 50 74 chr2 225198518 225198639 -25489215 + L2 LINE L2 2469 2586 -728 830 124 0 0 chr2 225198639 225198760 -25489094 + AluSp/q SINE Alu 185 305 -8 394 269 83 47 chr2 225198765 225198958 -25488896 + L2 LINE L2 2705 2904 -410 841 238 107 17 chr2 225199057 225199355 -25488499 + L2 LINE L2 2982 3306 -7 424 263 30 0 chr2 225199355 225199454 -25488400 + U13 snRNA snRNA 1 102 -2 210 143 0 0 chr2 225199474 225199509 -25488345 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 181 417 9 9 chr2 225199509 225199617 -25488237 + L2 LINE L2 3010 3117 -155 2002 138 0 3 chr2 225199701 225200006 -25487848 + AluSx SINE Alu 1 304 -8 205 306 21 111 chr2 225201458 225201602 -25486252 - MER5A DNA MER1_type -58 131 1 2082 84 30 14 chr2 225201907 225202204 -25485650 + AluSq SINE Alu 1 302 -11 2164 117 10 0 chr2 225202233 225202542 -25485312 - AluSx SINE Alu 0 312 1 398 387 5 5 chr2 225202563 225202762 -25485092 - L1ME2 LINE L1 -252 5912 5714 304 319 148 35 chr2 225203618 225204044 -25483810 + L2 LINE L2 2804 3277 -36 512 298 42 46 chr2 225204249 225204487 -25483367 - MIR SINE MIR -6 256 20 24 0 0 0 chr2 225204571 225204595 -25483259 + AT_rich Low_complexity Low_complexity 1 24 0 2055 121 0 0 chr2 225204607 225204905 -25482949 + AluSx SINE Alu 1 298 -14 1051 209 127 13 chr2 225204908 225205215 -25482639 - L1MD3 LINE L1 -10 7985 7644 948 124 32 83 chr2 225205216 225205433 -25482421 + AluJo SINE Alu 87 292 -20 1081 161 99 5 chr2 225205437 225205660 -25482194 - L1MC4a LINE L1 -404 7404 7161 903 216 10 25 chr2 225205726 225205925 -25481929 + AluJo SINE Alu 87 282 -30 252 77 0 0 chr2 225205931 225205970 -25481884 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2211 92 3 0 chr2 225205974 225206267 -25481587 + AluSp SINE Alu 1 294 -19 307 261 189 0 chr2 225206278 225206389 -25481465 + L2 LINE L2 3138 3269 -3 2280 92 0 0 chr2 225206709 225207003 -25480851 + AluSc SINE Alu 1 294 -15 3179 201 130 0 chr2 225207137 225207394 -25480460 - MER45B DNA AcHobo -622 959 737 1731 161 4 0 chr2 225207394 225207673 -25480181 - AluJo SINE Alu -32 280 1 2234 105 0 10 chr2 225207678 225207992 -25479862 - AluSq SINE Alu -2 311 1 1874 101 119 0 chr2 225207997 225208265 -25479589 - AluSg SINE Alu 0 300 1 3179 201 130 0 chr2 225208265 225208758 -25479096 - MER45B DNA AcHobo -850 731 98 2232 103 0 0 chr2 225208759 225209061 -25478793 + AluSc SINE Alu 1 302 -7 2317 93 0 0 chr2 225209071 225209372 -25478482 + AluSx SINE Alu 1 301 -11 862 132 0 0 chr2 225209381 225209502 -25478352 + AluJo/FLAM SINE Alu 5 125 -187 1360 93 0 0 chr2 225209504 225209676 -25478178 - AluSq SINE Alu -141 172 1 1870 115 23 33 chr2 225209684 225209988 -25477866 - AluJb SINE Alu -11 301 1 222 214 0 0 chr2 225209990 225210032 -25477822 + MER5A DNA MER1_type 148 189 0 220 318 221 22 chr2 225210032 225210155 -25477699 + L2 LINE L2 2948 3045 -227 1675 114 126 0 chr2 225210155 225210418 -25477436 - AluSx SINE Alu -16 296 1 220 318 221 22 chr2 225210418 225210558 -25477296 + L2 LINE L2 3045 3264 -8 218 297 0 11 chr2 225211330 225211421 -25476433 + CT-rich Low_complexity Low_complexity 2 91 0 222 177 16 32 chr2 225211473 225211535 -25476319 + CT-rich Low_complexity Low_complexity 1 61 0 346 197 141 0 chr2 225212030 225212101 -25475753 + FLAM_A SINE Alu 45 125 -8 272 303 41 28 chr2 225212184 225212329 -25475525 - L2 LINE L2 -234 3038 2892 589 122 22 0 chr2 225213209 225213299 -25474555 + FLAM_C SINE Alu 34 125 -18 23 0 0 29 chr2 225213299 225213310 -25474544 + AT_rich Low_complexity Low_complexity 1 11 -22 2237 101 0 0 chr2 225213310 225213608 -25474246 + AluSx SINE Alu 1 298 -14 23 0 0 29 chr2 225213608 225213630 -25474224 + AT_rich Low_complexity Low_complexity 11 33 0 608 132 12 2 chr2 225213630 225213873 -25473981 + AluJ SINE Alu 1 296 -16 198 0 0 0 chr2 225214897 225214919 -25472935 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 340 335 101 5 chr2 225214926 225215135 -25472719 - MIR SINE MIR -14 248 20 921 288 27 69 chr2 225217187 225217675 -25470179 + L2 LINE L2 2801 3270 -2 2147 105 0 3 chr2 225217827 225218122 -25469732 + AluSg SINE Alu 1 294 -16 422 277 19 7 chr2 225218347 225218502 -25469352 - MER113 DNA MER1_type? -221 300 144 2080 111 3 0 chr2 225218502 225218800 -25469054 + AluSg SINE Alu 1 299 -11 2312 79 0 0 chr2 225218827 225219156 -25468698 - L1P4 LINE L1 -485 5683 5355 207 0 0 0 chr2 225219156 225219179 -25468675 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5456 59 19 10 chr2 225219179 225219904 -25467950 - SVA Other Other -17 1369 638 2111 101 3 10 chr2 225219906 225220204 -25467650 - AluSc SINE Alu -10 299 4 2395 77 0 3 chr2 225220208 225220520 -25467334 - AluY SINE Alu 0 311 1 8081 122 13 52 chr2 225220550 225221034 -25466820 - HUERS-P3b LTR ERV1 -4 7414 6912 2066 112 0 7 chr2 225221034 225221329 -25466525 + AluY SINE Alu 1 293 -18 8081 122 13 52 chr2 225221329 225221583 -25466271 - HUERS-P3b LTR ERV1 -506 6912 6650 2126 102 0 7 chr2 225221583 225221876 -25465978 + AluSp SINE Alu 1 291 -22 8081 122 13 52 chr2 225221876 225222257 -25465597 - HUERS-P3b LTR ERV1 -768 6650 6357 3098 122 139 13 chr2 225222257 225222299 -25465555 - LTR10A LTR ERV1 -2 607 572 2339 93 0 0 chr2 225222299 225222609 -25465245 + AluY SINE Alu 1 310 -1 3098 122 139 13 chr2 225222609 225223105 -25464749 - LTR10A LTR ERV1 -37 572 1 8081 122 13 52 chr2 225223105 225223379 -25464475 - HUERS-P3b LTR ERV1 -1061 6357 6074 3949 151 3 0 chr2 225223379 225224069 -25463785 - L1P LINE L1 -1349 4797 4106 2261 64 7 10 chr2 225224096 225224394 -25463460 + AluY SINE Alu 1 297 -14 717 162 51 0 chr2 225224465 225224582 -25463272 - FLAM_C SINE Alu -10 123 1 4200 193 31 45 chr2 225225465 225226431 -25461423 + LTR13 LTR ERVK 1 952 -2 1698 129 16 0 chr2 225226431 225226687 -25461167 + AluSx SINE Alu 53 312 0 1259 97 11 0 chr2 225226702 225226877 -25460977 + AluSc SINE Alu 118 294 -15 1135 109 6 6 chr2 225227066 225227231 -25460623 - AluSx SINE Alu -147 165 1 2170 94 0 13 chr2 225227292 225227590 -25460264 + AluSg SINE Alu 1 294 -16 279 0 0 0 chr2 225228151 225228182 -25459672 + (TC)n Simple_repeat Simple_repeat 2 32 0 2100 98 30 3 chr2 225229178 225229473 -25458381 + AluSx SINE Alu 1 303 -9 1746 151 15 52 chr2 225229481 225229805 -25458049 + AluJb SINE Alu 1 312 0 1048 76 0 0 chr2 225229814 225229946 -25457908 + AluSp SINE Alu 1 132 -181 2179 101 0 16 chr2 225229948 225230256 -25457598 + AluSg SINE Alu 1 303 -7 2071 123 3 19 chr2 225230700 225231017 -25456837 - AluSx SINE Alu 0 312 1 2047 84 7 24 chr2 225231021 225231341 -25456513 - AluSg SINE Alu 0 315 1 1346 94 0 35 chr2 225231588 225231718 -25456136 - MER4A LTR ERV1 0 664 542 2256 89 3 3 chr2 225231718 225232022 -25455832 - AluSp SINE Alu -9 304 1 1346 94 0 35 chr2 225232022 225232093 -25455761 - MER4A LTR ERV1 -122 542 470 1420 67 0 0 chr2 225232101 225232280 -25455574 + AluY SINE Alu 118 296 -15 1173 114 31 70 chr2 225232280 225232711 -25455143 - MER4A LTR ERV1 -182 482 1 837 120 15 15 chr2 225232785 225232918 -25454936 + FLAM_C SINE Alu 1 133 0 2143 97 10 7 chr2 225232963 225233262 -25454592 + AluSx SINE Alu 1 300 -12 1853 105 29 4 chr2 225233262 225233539 -25454315 + AluSq SINE Alu 14 297 -16 2398 61 0 19 chr2 225234090 225234403 -25453451 + AluY SINE Alu 1 307 -4 2133 109 0 19 chr2 225234412 225234725 -25453129 + AluSx SINE Alu 1 307 -5 2401 75 7 0 chr2 225236024 225236330 -25451524 + AluY SINE Alu 1 308 -3 768 164 0 0 chr2 225236509 225236631 -25451223 - AluJo SINE Alu -69 243 122 1846 167 3 0 chr2 225236695 225236995 -25450859 - AluSx SINE Alu 0 312 12 1990 129 7 3 chr2 225237022 225237316 -25450538 - AluSx SINE Alu -17 295 1 1322 187 33 66 chr2 225237516 225237848 -25450006 - MLT1A2 LTR MaLR -6 368 48 341 293 138 0 chr2 225239097 225239213 -25448641 - MIR SINE MIR -109 153 22 2305 72 13 0 chr2 225239213 225239519 -25448335 + AluSg SINE Alu 1 310 0 195 222 32 63 chr2 225240053 225240116 -25447738 - L2 LINE L2 -208 3064 3004 279 306 75 7 chr2 225240148 225240295 -25447559 - L1ME4a LINE L1 -8 6113 5957 1576 191 17 17 chr2 225240378 225240677 -25447177 - AluJb SINE Alu -13 299 1 801 167 8 0 chr2 225240687 225240819 -25447035 - FLAM_C SINE Alu 0 133 1 415 231 88 34 chr2 225240823 225240970 -25446884 - L1ME4a LINE L1 -393 5728 5574 218 291 12 23 chr2 225240995 225241081 -25446773 - L2 LINE L2 -296 2976 2892 535 211 137 32 chr2 225241120 225241310 -25446544 - L2 LINE L2 -252 3061 2852 1902 160 3 13 chr2 225241695 225242001 -25445853 + AluJo SINE Alu 1 303 -9 1356 200 19 57 chr2 225242292 225242414 -25445440 + AluJo SINE Alu 3 128 -184 2129 131 0 0 chr2 225242414 225242704 -25445150 - AluSx SINE Alu -18 294 5 1356 200 19 57 chr2 225242704 225242896 -25444958 + AluJo SINE Alu 128 305 -7 675 227 116 0 chr2 225242934 225243106 -25444748 - MIR SINE MIR -67 195 4 2342 78 3 0 chr2 225243231 225243537 -25444317 - AluSp SINE Alu 0 307 1 581 251 37 12 chr2 225243622 225243785 -25444069 - L2 LINE L2 -191 3081 2915 2526 67 0 3 chr2 225244035 225244334 -25443520 + AluY SINE Alu 1 298 -13 2234 84 30 14 chr2 225244341 225244638 -25443216 + AluSg SINE Alu 1 302 -8 1616 114 0 87 chr2 225244842 225245089 -25442765 - Tigger3(Golem) DNA MER2_type -2 3026 2808 2513 87 0 0 chr2 225245089 225245399 -25442455 + AluY SINE Alu 1 310 -1 1616 114 0 87 chr2 225245399 225245449 -25442405 - Tigger3(Golem) DNA MER2_type -220 2808 2755 1870 92 0 0 chr2 225245452 225245681 -25442173 + AluSg SINE Alu 1 229 -81 401 111 0 0 chr2 225245681 225245735 -25442119 - Alu SINE Alu -254 54 1 1844 172 7 10 chr2 225245782 225246085 -25441769 - AluJb SINE Alu -10 302 1 451 94 0 0 chr2 225246085 225246149 -25441705 - L1MC/D LINE L1 -548 5694 5631 * 2537 146 14 85 chr2 225246142 225246368 -25441486 - L1MC/D LINE L1 -435 5807 5567 1745 204 0 6 chr2 225246368 225246681 -25441173 + AluJo SINE Alu 1 311 -1 2432 84 3 13 chr2 225246690 225247001 -25440853 + AluSx SINE Alu 5 312 0 2537 146 14 85 chr2 225247001 225247286 -25440568 - L1MC/D LINE L1 -683 5559 5255 2194 117 3 3 chr2 225247286 225247593 -25440261 - AluSg SINE Alu -3 307 1 2331 110 0 3 chr2 225247599 225247907 -25439947 - AluSg SINE Alu -3 307 1 2537 146 14 85 chr2 225247907 225247927 -25439927 - L1MC/D LINE L1 -992 5250 5230 2402 93 13 0 chr2 225247927 225248227 -25439627 - AluSx SINE Alu -8 304 1 2537 146 14 85 chr2 225248227 225248361 -25439493 - L1MC/D LINE L1 -1012 5230 5163 613 98 10 0 chr2 225248362 225248464 -25439390 - AluSp SINE Alu -3 310 208 1150 53 0 0 chr2 225248464 225248595 -25439259 - AluSp SINE Alu -182 131 1 576 239 40 6 chr2 225248602 225248778 -25439076 - L1MC/D LINE L1 -982 5164 4983 1691 120 132 0 chr2 225249322 225249580 -25438274 + AluJo SINE Alu 1 292 -20 1763 249 96 14 chr2 225249674 225250185 -25437669 - MER21B LTR ERV1 -57 806 254 849 178 15 91 chr2 225250216 225250413 -25437441 + AluJo SINE Alu 23 204 -108 1121 127 19 6 chr2 225250413 225250571 -25437283 - AluJo SINE Alu -144 168 9 2103 106 6 34 chr2 225250611 225250951 -25436903 - AluSx SINE Alu 0 331 1 1253 151 8 92 chr2 225251082 225251258 -25436596 - AluJb SINE Alu -11 301 151 2509 53 0 23 chr2 225251258 225251419 -25436435 - AluY SINE Alu -18 293 141 191 36 36 0 chr2 225251419 225251447 -25436407 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 2509 53 0 23 chr2 225251447 225251585 -25436269 - AluY SINE Alu -170 141 1 1253 151 8 92 chr2 225251585 225251659 -25436195 - AluJb SINE Alu -161 151 72 449 267 0 0 chr2 225251673 225251774 -25436080 + AluJo SINE Alu 124 224 -88 1090 88 0 22 chr2 225251775 225251912 -25435942 + AluSx SINE Alu 2 135 -178 1620 98 0 5 chr2 225251912 225252115 -25435739 + AluSg SINE Alu 1 202 -108 914 151 32 65 chr2 225252241 225252427 -25435427 + AluSx SINE Alu 132 311 -1 2173 124 3 3 chr2 225252502 225252801 -25435053 + AluSx SINE Alu 2 300 -12 215 214 229 0 chr2 225252820 225252890 -25434964 - L2 LINE L2 -1 3312 3227 2019 150 0 3 chr2 225252951 225253251 -25434603 + AluJb SINE Alu 1 299 -13 2299 115 6 3 chr2 225253398 225253710 -25434144 - AluSq SINE Alu 0 313 1 2302 113 0 0 chr2 225253715 225254016 -25433838 - AluSx SINE Alu -11 301 1 344 250 174 30 chr2 225254278 225254410 -25433444 + MER5A DNA MER1_type 39 189 0 229 306 91 22 chr2 225254412 225254441 -25433413 + L1MC5 LINE L1 7278 7304 -657 2241 108 0 3 chr2 225254441 225254737 -25433117 + AluSx SINE Alu 1 295 -17 229 306 91 22 chr2 225254737 225254939 -25432915 + L1MC5 LINE L1 7304 7525 -436 2440 101 0 0 chr2 225254971 225255277 -25432577 + AluSx SINE Alu 3 308 -4 2347 117 0 0 chr2 225255279 225255587 -25432267 + AluSc SINE Alu 1 308 -1 2063 121 35 0 chr2 225255656 225255945 -25431909 + AluSx SINE Alu 5 303 -9 743 306 89 34 chr2 225256193 225256436 -25431418 + L1ME4a LINE L1 5365 5593 -528 2458 57 0 72 chr2 225256436 225256768 -25431086 - AluY SINE Alu -3 308 1 743 306 89 34 chr2 225256768 225256961 -25430893 + L1ME4a LINE L1 5593 5829 -292 1802 141 23 39 chr2 225256961 225257267 -25430587 + AluJb SINE Alu 2 302 -10 2024 129 0 4 chr2 225257314 225257592 -25430262 + AluSx SINE Alu 1 277 -35 477 0 0 0 chr2 225257593 225257646 -25430208 + (TC)n Simple_repeat Simple_repeat 2 54 0 315 0 0 0 chr2 225257645 225257680 -25430174 + (TA)n Simple_repeat Simple_repeat 1 35 0 * 315 0 0 0 chr2 225257839 225257874 -25429980 + (TC)n Simple_repeat Simple_repeat 2 36 0 234 0 0 0 chr2 225257873 225257899 -25429955 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 31 0 0 0 chr2 225257958 225257989 -25429865 + AT_rich Low_complexity Low_complexity 1 31 0 1039 190 17 0 chr2 225257996 225258170 -25429684 - AluSg/x SINE Alu -24 286 110 3575 176 21 40 chr2 225258268 225258559 -25429295 + MER44D DNA MER2_type 20 162 -2325 2198 121 3 10 chr2 225258559 225258865 -25428989 + AluSx SINE Alu 1 304 -8 3575 176 21 40 chr2 225258865 225259301 -25428553 + MER44D DNA MER2_type 162 605 0 2496 78 0 0 chr2 225259635 225259941 -25427913 + AluSg SINE Alu 1 306 -4 2106 134 21 0 chr2 225260328 225260618 -25427236 + AluSx SINE Alu 1 296 -16 321 213 0 0 chr2 225261131 225261192 -25426662 + MER81 DNA DNA 53 113 -1 2205 135 3 0 chr2 225261829 225262140 -25425714 + AluSx SINE Alu 1 312 0 2558 74 0 0 chr2 225262256 225262566 -25425288 - AluY SINE Alu -1 310 1 280 293 173 58 chr2 225262567 225262932 -25424922 - L2 LINE L2 -13 3259 2853 207 202 217 116 chr2 225263509 225263638 -25424216 - MIR3 SINE MIR -1 207 66 2319 84 0 3 chr2 225263652 225263965 -25423889 + AluSq SINE Alu 1 312 0 235 213 175 0 chr2 225264568 225264648 -25423206 + MER5B DNA MER1_type 2 95 -83 347 276 48 0 chr2 225264651 225264756 -25423098 + MER5B DNA MER1_type 51 160 -18 2322 111 3 0 chr2 225264794 225265100 -25422754 + AluSx SINE Alu 1 307 -5 229 254 18 0 chr2 225265255 225265310 -25422544 - L2 LINE L2 -44 3228 3173 353 233 20 53 chr2 225265693 225265843 -25422011 + CT-rich Low_complexity Low_complexity 6 150 0 2222 111 0 23 chr2 225266333 225266640 -25421214 - AluSx SINE Alu -12 300 1 264 148 139 46 chr2 225266643 225266751 -25421103 + MER113 DNA MER1_type? 18 135 -386 2270 126 0 0 chr2 225266751 225267060 -25420794 - AluSx SINE Alu -2 310 2 324 231 115 23 chr2 225267069 225267199 -25420655 - MIR3 SINE MIR -64 144 3 2216 131 10 0 chr2 225267927 225268232 -25419622 - AluSx SINE Alu -4 308 1 1158 128 0 79 chr2 225268235 225268289 -25419565 - AluJo SINE Alu -125 187 130 2450 75 0 3 chr2 225268289 225268582 -25419272 - AluY SINE Alu -19 292 1 1158 128 0 79 chr2 225268582 225268730 -25419124 - AluJo SINE Alu -182 130 1 259 254 115 31 chr2 225268731 225268861 -25418993 + Charlie8 DNA MER1_type 124 264 -2153 2402 95 0 7 chr2 225269002 225269306 -25418548 - AluSx SINE Alu -10 302 1 697 176 22 60 chr2 225269363 225269545 -25418309 - MER96 DNA MER1_type 0 175 1 228 348 0 0 chr2 225270209 225270278 -25417576 - L2 LINE L2 -25 3247 3179 2135 104 11 4 chr2 225270358 225270636 -25417218 - AluSq SINE Alu -19 294 15 342 352 11 6 chr2 225272105 225272281 -25415573 + (TTGGGG)n Simple_repeat Simple_repeat 2 178 0 2212 108 13 19 chr2 225272747 225273054 -25414800 + AluSq SINE Alu 1 305 -8 478 182 106 7 chr2 225273346 225273485 -25414369 + MIR SINE MIR 35 183 -63 257 260 52 0 chr2 225273911 225273988 -25413866 - L3 LINE CR1 -77 1500 1420 254 321 37 0 chr2 225274216 225274325 -25413529 + (TTGGGG)n Simple_repeat Simple_repeat 5 117 0 2325 109 3 0 chr2 225274834 225275136 -25412718 + AluSx SINE Alu 1 303 -9 559 133 0 0 chr2 225275137 225275220 -25412634 + AluS SINE Alu 2 84 -229 281 335 67 30 chr2 225275222 225275305 -25412549 - L2 LINE L2 -343 2971 2893 2138 121 31 0 chr2 225275305 225275595 -25412259 + AluSx SINE Alu 1 299 -13 2361 97 0 0 chr2 225275595 225275893 -25411961 + AluSp SINE Alu 1 298 -15 281 335 67 30 chr2 225275893 225276077 -25411777 - L2 LINE L2 -420 2894 2693 224 247 97 11 chr2 225277195 225277288 -25410566 - L2 LINE L2 -11 3261 3161 213 217 0 0 chr2 225277297 225277343 -25410511 + L2 LINE L2 3173 3218 -54 2130 125 0 20 chr2 225277516 225277819 -25410035 - AluSx SINE Alu -15 297 1 299 335 32 19 chr2 225277867 225278025 -25409829 + L3b LINE CR1 1317 1476 -107 260 308 103 0 chr2 225278618 225278725 -25409129 - MIR3 SINE MIR -47 161 44 362 198 274 0 chr2 225279273 225279379 -25408475 - MER3 DNA MER1_type -55 154 20 258 32 0 0 chr2 225279840 225279871 -25407983 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 2425 102 0 0 chr2 225280607 225280911 -25406943 - AluSx SINE Alu -8 304 1 373 257 10 136 chr2 225280911 225281117 -25406737 - MER5A DNA MER1_type -3 186 7 2069 147 6 13 chr2 225281217 225281531 -25406323 + AluJb SINE Alu 1 312 0 2234 114 10 0 chr2 225281952 225282250 -25405604 - AluSx SINE Alu -11 301 1 240 191 162 15 chr2 225282626 225282694 -25405160 - L2 LINE L2 -54 3259 3182 2403 97 7 0 chr2 225282787 225283087 -25404767 + AluSx SINE Alu 1 302 -10 354 296 246 32 chr2 225283163 225283386 -25404468 - L2 LINE L2 -348 2966 2792 2247 94 3 0 chr2 225283386 225283672 -25404182 + AluSq SINE Alu 1 287 -26 354 296 246 32 chr2 225283672 225284066 -25403788 - L2 LINE L2 -522 2792 2217 721 190 15 22 chr2 225284157 225284294 -25403560 - AluJb SINE Alu -19 293 158 451 233 72 2 chr2 225284722 225284860 -25402994 - MIR SINE MIR -67 141 4 2373 87 13 0 chr2 225284875 225285175 -25402679 - AluSx SINE Alu -8 304 1 2079 149 0 0 chr2 225285334 225285635 -25402219 - AluSx SINE Alu -11 301 1 2306 109 0 13 chr2 225285644 225285948 -25401906 - AluSq SINE Alu -11 302 3 2568 57 3 0 chr2 225285959 225286258 -25401596 - AluY SINE Alu -11 300 1 2019 114 0 17 chr2 225286797 225287086 -25400768 + AluJo SINE Alu 1 284 -28 448 291 124 44 chr2 225287661 225287692 -25400162 - L1ME LINE L1 -460 5661 5634 2300 61 9 73 chr2 225287692 225288021 -25399833 + AluY SINE Alu 1 308 -3 448 291 124 44 chr2 225288021 225288264 -25399590 - L1ME LINE L1 -487 5634 5365 2063 121 35 0 chr2 225288512 225288801 -25399053 - AluSx SINE Alu -9 303 5 2347 117 0 0 chr2 225288870 225289178 -25398676 - AluSc SINE Alu -1 308 1 2168 124 7 3 chr2 225289180 225289486 -25398368 - AluSx SINE Alu -4 308 2 449 267 0 0 chr2 225289487 225289588 -25398266 - AluJo SINE Alu -88 224 124 1253 151 8 92 chr2 225289602 225289676 -25398178 + AluJb SINE Alu 72 151 -161 2366 63 3 33 chr2 225289676 225289816 -25398038 + AluY SINE Alu 1 144 -167 185 0 40 0 chr2 225289816 225289841 -25398013 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2366 63 3 33 chr2 225289841 225290002 -25397852 + AluY SINE Alu 144 293 -18 1253 151 8 92 chr2 225290002 225290178 -25397676 + AluJb SINE Alu 151 301 -11 842 167 17 11 chr2 225290309 225290483 -25397371 + AluSx SINE Alu 1 175 -137 26 0 0 0 chr2 225290694 225290720 -25397134 + AT_rich Low_complexity Low_complexity 1 26 0 2050 118 3 14 chr2 225290793 225291090 -25396764 + AluSx SINE Alu 7 300 -12 222 214 229 0 chr2 225291109 225291179 -25396675 - L2 LINE L2 -1 3312 3227 1818 159 7 13 chr2 225291240 225291541 -25396313 + AluJb SINE Alu 1 299 -13 2248 115 6 3 chr2 225291688 225292000 -25395854 - AluSq SINE Alu 0 313 1 2220 108 14 0 chr2 225292005 225292302 -25395552 - AluSx SINE Alu -11 301 1 597 234 7 0 chr2 225292306 225292443 -25395411 - L1ME LINE L1 -853 5293 5156 686 83 10 0 chr2 225292443 225292539 -25395315 - AluSp SINE Alu -9 304 208 1131 53 0 0 chr2 225292539 225292670 -25395184 - AluSp SINE Alu -182 131 1 630 239 40 6 chr2 225292677 225292853 -25395001 - L1ME LINE L1 -982 5164 4983 1650 120 132 0 chr2 225293397 225293655 -25394199 + AluJo SINE Alu 1 292 -20 1755 244 98 14 chr2 225293749 225294258 -25393596 - MER21B LTR ERV1 -57 806 255 649 150 18 26 chr2 225294289 225294402 -25393452 + FLAM_C SINE Alu 23 134 -9 549 209 126 53 chr2 225294701 225294907 -25392947 + L1ME LINE L1 5599 5819 -302 28 29 0 0 chr2 225295071 225295106 -25392748 + AT_rich Low_complexity Low_complexity 1 35 0 2378 72 30 7 chr2 225295183 225295487 -25392367 + AluY SINE Alu 1 311 0 432 105 35 23 chr2 225295611 225295697 -25392157 + AluJ/FRAM SINE Alu 221 307 -5 1919 158 0 10 chr2 225295707 225295999 -25391855 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr2 225296003 225296025 -25391829 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 765 229 0 0 chr2 225296204 225296335 -25391519 + FLAM_A SINE Alu 2 132 -1 2233 94 0 11 chr2 225296634 225296920 -25390934 - AluSq SINE Alu -30 283 1 1995 100 6 91 chr2 225297368 225297687 -25390167 + AluSq SINE Alu 5 296 -17 2466 89 0 0 chr2 225298076 225298379 -25389475 + AluSc SINE Alu 1 303 -6 667 203 52 145 chr2 225298583 225298641 -25389213 + HAL1 LINE L1 58 120 -2387 2338 97 7 0 chr2 225298641 225298949 -25388905 + AluSq SINE Alu 1 310 -3 667 203 52 145 chr2 225298949 225299139 -25388715 + HAL1 LINE L1 120 268 -2239 1797 125 0 73 chr2 225299139 225299292 -25388562 + AluSx SINE Alu 1 121 -191 2281 117 0 7 chr2 225299292 225299601 -25388253 + AluSq SINE Alu 3 309 -4 1797 125 0 73 chr2 225299601 225299760 -25388094 + AluSx SINE Alu 121 290 -22 667 203 52 145 chr2 225299760 225299855 -25387999 + HAL1 LINE L1 268 370 -2137 1759 110 12 16 chr2 225300320 225300574 -25387280 + AluSx SINE Alu 21 273 -39 360 0 0 0 chr2 225300592 225300632 -25387222 + (CA)n Simple_repeat Simple_repeat 2 41 0 2522 66 3 0 chr2 225300931 225301234 -25386620 - AluY SINE Alu -7 304 1 2230 103 3 19 chr2 225301244 225301554 -25386300 - AluSc SINE Alu -4 305 1 346 155 17 0 chr2 225301559 225301617 -25386237 + MER5B DNA MER1_type 120 178 0 1990 146 0 10 chr2 225301633 225301935 -25385919 - AluSx SINE Alu -13 299 1 1676 170 14 3 chr2 225302197 225302486 -25385368 + AluJo SINE Alu 1 292 -20 826 187 0 15 chr2 225302693 225302827 -25385027 + FLAM_C SINE Alu 2 133 0 1881 128 8 0 chr2 225302995 225303253 -25384601 - AluSx SINE Alu -52 260 1 350 230 27 0 chr2 225303276 225303350 -25384504 + MIR SINE MIR 187 262 0 1086 190 18 50 chr2 225303724 225303945 -25383909 - MER20 DNA MER1_type 0 219 6 1919 152 14 0 chr2 225304131 225304428 -25383426 - AluSx SINE Alu -11 301 1 1726 86 58 39 chr2 225304595 225304713 -25383141 - AluSq SINE Alu -51 262 148 387 0 0 0 chr2 225304713 225304756 -25383098 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 2358 76 0 0 chr2 225304756 225305044 -25382810 - AluSg SINE Alu -22 288 1 1726 86 58 39 chr2 225305044 225305181 -25382673 - AluSq SINE Alu -164 149 1 2234 102 3 7 chr2 225305280 225305585 -25382269 - AluSx SINE Alu -7 305 2 1952 117 3 59 chr2 225305595 225305919 -25381935 - AluSq SINE Alu -7 306 1 2253 99 3 7 chr2 225306087 225306391 -25381463 - AluSx SINE Alu -9 303 1 2451 79 0 0 chr2 225307208 225307512 -25380342 - AluY SINE Alu -7 304 1 682 356 84 37 chr2 225307569 225308131 -25379723 + L2 LINE L2 2376 2963 -351 412 245 41 0 chr2 225308209 225308307 -25379547 - L2 LINE L2 -13 3300 3199 185 325 0 0 chr2 225308306 225308346 -25379508 - L2 LINE L2 -369 2944 2905 * 525 347 43 43 chr2 225308322 225308347 -25379507 - L2 LINE L2 -1951 1363 1339 186 43 0 0 chr2 225308347 225308370 -25379484 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 525 347 43 43 chr2 225308370 225308667 -25379187 - L2 LINE L2 -1974 1340 1041 236 271 86 0 chr2 225308632 225308702 -25379152 - MER5A DNA MER1_type -113 76 1 * 240 324 39 20 chr2 225308702 225308803 -25379051 - L2 LINE L2 -2505 809 707 589 288 222 10 chr2 225308818 225309106 -25378748 + L2 LINE L2 2140 2488 -826 2308 89 0 26 chr2 225309136 225309449 -25378405 + AluSx SINE Alu 1 305 -7 365 282 108 28 chr2 225309511 225309746 -25378108 - MLT1H1 LTR MaLR -285 270 10 460 246 62 114 chr2 225309747 225309861 -25377993 - L1MC4 LINE L1 -125 7917 7799 2107 131 3 10 chr2 225309861 225310158 -25377696 - AluSq SINE Alu -18 295 1 460 246 62 114 chr2 225310158 225310384 -25377470 - L1MC4 LINE L1 -243 7799 7595 448 330 56 22 chr2 225310420 225310599 -25377255 + L2 LINE L2 400 584 -2730 1642 138 28 8 chr2 225311180 225311433 -25376421 - Tigger3(Golem) DNA MER2_type -1 3028 2771 1233 107 6 6 chr2 225311755 225311932 -25375922 - AluSg/x SINE Alu -13 299 123 225 227 129 15 chr2 225312475 225312607 -25375247 - L1ME4a LINE L1 -1 6120 5974 1862 91 64 74 chr2 225312728 225312845 -25375009 + AluSx SINE Alu 1 118 -194 1892 133 25 7 chr2 225312845 225313152 -25374702 + AluSx SINE Alu 1 312 0 1862 91 64 74 chr2 225313152 225313331 -25374523 + AluSx SINE Alu 118 295 -17 1803 180 0 3 chr2 225313684 225313973 -25373881 + AluJb SINE Alu 1 288 -24 30 83 0 0 chr2 225317115 225317187 -25370667 + AT_rich Low_complexity Low_complexity 1 72 0 2164 116 7 0 chr2 225317257 225317551 -25370303 + AluSx SINE Alu 1 296 -16 1948 65 8 11 chr2 225317552 225317814 -25370040 + AluY SINE Alu 45 305 -6 415 277 85 7 chr2 225317968 225318166 -25369688 - MIR SINE MIR 0 262 11 300 317 171 0 chr2 225318344 225318467 -25369387 + MIR3 SINE MIR 65 208 0 2175 103 3 7 chr2 225318969 225319260 -25368594 - AluSg SINE Alu -20 290 1 938 244 59 47 chr2 225319260 225319552 -25368302 - L1ME4a LINE L1 -180 5990 5692 2104 95 35 3 chr2 225319552 225319836 -25368018 + AluY SINE Alu 1 293 -18 938 244 59 47 chr2 225319836 225319883 -25367971 - L1ME4a LINE L1 -478 5692 5647 203 125 0 0 chr2 225320104 225320136 -25367718 - L2 LINE L2 -2 3270 3239 1936 208 77 105 chr2 225320143 225320366 -25367488 + MLT1E1 LTR MaLR 7 235 -419 1892 155 3 3 chr2 225320366 225320657 -25367197 - AluJb SINE Alu -21 291 1 1936 208 77 105 chr2 225320657 225321098 -25366756 + MLT1E1 LTR MaLR 235 652 -2 1309 289 51 61 chr2 225321100 225321401 -25366453 - L2 LINE L2 -30 3283 2980 1771 175 0 3 chr2 225321401 225321693 -25366161 + AluJb SINE Alu 1 291 -21 1309 289 51 61 chr2 225321693 225322203 -25365651 - L2 LINE L2 -333 2980 2472 1758 166 10 10 chr2 225322208 225322503 -25365351 + AluJo SINE Alu 1 295 -17 2221 127 0 0 chr2 225322954 225323254 -25364600 - AluSx SINE Alu -12 300 1 274 293 104 15 chr2 225323743 225324002 -25363852 + HAL1b LINE L1 101 382 -966 1921 174 0 0 chr2 225324621 225324925 -25362929 - AluJb SINE Alu -8 304 1 754 186 0 16 chr2 225325027 225325156 -25362698 + AluJb SINE Alu 171 297 -15 2102 150 3 6 chr2 225325495 225325808 -25362046 + AluSx SINE Alu 1 312 0 2006 130 0 7 chr2 225326126 225326434 -25361420 - AluSq SINE Alu 0 306 1 2186 114 7 7 chr2 225326546 225326852 -25361002 - AluSg SINE Alu -4 306 1 2092 102 3 31 chr2 225326855 225327183 -25360671 - AluSx SINE Alu 0 320 1 873 177 20 94 chr2 225327702 225327905 -25359949 - MER5A DNA MER1_type -1 188 1 2071 124 3 0 chr2 225327926 225328235 -25359619 + AluSx SINE Alu 1 310 0 327 254 100 18 chr2 225328338 225328448 -25359406 - L1MC/D LINE L1 -559 5683 5565 2272 107 0 7 chr2 225328474 225328783 -25359071 + AluY SINE Alu 2 308 -3 1500 208 95 71 chr2 225328785 225329264 -25358590 - L1MC4 LINE L1 0 8042 7576 1621 166 49 0 chr2 225329264 225329548 -25358306 - AluJb SINE Alu -14 298 1 1996 149 0 13 chr2 225329550 225329727 -25358127 - AluSx SINE Alu -8 304 126 240 35 0 0 chr2 225329727 225329756 -25358098 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1837 122 48 7 chr2 225329756 225330026 -25357828 - AluSg SINE Alu -29 281 1 1996 149 0 13 chr2 225330026 225330155 -25357699 - AluSx SINE Alu -184 128 1 1500 208 95 71 chr2 225330155 225330219 -25357635 - L1MC4 LINE L1 -466 7576 7483 1091 93 0 182 chr2 225330280 225330516 -25357338 - 7SK RNA RNA 0 193 1 1754 171 11 7 chr2 225330521 225330808 -25357046 - AluJb SINE Alu -13 299 12 264 272 37 25 chr2 225330823 225330904 -25356950 - L1MC4 LINE L1 -598 7444 7363 1183 251 137 116 chr2 225330916 225332914 -25354940 + L1MEc LINE L1 38 2087 -4309 2387 85 7 0 chr2 225332914 225333219 -25354635 + AluSp SINE Alu 1 307 -6 1183 251 137 116 chr2 225333219 225333420 -25354434 + L1MEc LINE L1 2087 2282 -4114 713 222 53 29 chr2 225333443 225333650 -25354204 + L1MEc LINE L1 2379 2590 -3625 1657 191 3 32 chr2 225333905 225334214 -25353640 - AluJo SINE Alu -12 300 1 834 199 0 0 chr2 225334225 225334366 -25353488 - FLAM_C SINE Alu -2 141 1 729 289 71 71 chr2 225334371 225334512 -25353342 - HAL1b LINE L1 -440 908 768 1722 185 0 14 chr2 225334512 225334798 -25353056 - AluJb SINE Alu -30 282 1 729 289 71 71 chr2 225334798 225335342 -25352512 - HAL1b LINE L1 -580 768 225 1927 150 3 7 chr2 225335342 225335642 -25352212 - AluJo SINE Alu -12 300 2 729 289 71 71 chr2 225335642 225335766 -25352088 - HAL1b LINE L1 -1123 225 95 2281 101 20 0 chr2 225335766 225336064 -25351790 - AluSx SINE Alu -8 304 1 729 289 71 71 chr2 225336064 225336108 -25351746 - HAL1b LINE L1 -1252 96 53 2219 92 3 7 chr2 225336278 225336562 -25351292 - AluSx SINE Alu -14 298 16 1910 133 14 0 chr2 225336630 225336937 -25350917 - AluSx SINE Alu 0 311 1 601 280 65 30 chr2 225338696 225338928 -25348926 + MIR SINE MIR 2 241 -21 796 158 55 0 chr2 225338947 225339074 -25348780 + AluJo SINE Alu 2 135 -177 351 248 119 73 chr2 225339995 225340191 -25347663 - L1M3 LINE L1 -509 5657 5466 1706 183 0 7 chr2 225340191 225340492 -25347362 + AluSx SINE Alu 2 300 -12 351 248 119 73 chr2 225340492 225340598 -25347256 - L1M3 LINE L1 -700 5466 5366 1960 128 3 40 chr2 225340626 225340792 -25347062 - AluSx SINE Alu -19 293 141 2347 84 0 3 chr2 225340792 225341089 -25346765 - AluSq SINE Alu -17 296 1 1960 128 3 40 chr2 225341089 225341226 -25346628 - AluSx SINE Alu -171 141 1 244 259 19 128 chr2 225341258 225341524 -25346330 - L1M3 LINE L1 -1005 5141 4905 634 174 92 9 chr2 225341580 225341689 -25346165 + FLAM_C SINE Alu 1 118 -15 2137 116 0 19 chr2 225341704 225342022 -25345832 + AluSx SINE Alu 1 312 0 439 297 97 5 chr2 225342231 225342416 -25345438 - L1M3 LINE L1 -3829 2317 2116 * 466 285 79 36 chr2 225342399 225342564 -25345290 - L1MEd LINE L1 -4122 2188 2017 1241 172 5 9 chr2 225342596 225342811 -25345043 - AluJo SINE Alu -98 214 1 1550 194 36 53 chr2 225342866 225343279 -25344575 - L1ME1 LINE L1 -5 6161 5756 1829 152 0 30 chr2 225343296 225343598 -25344256 - AluJb SINE Alu -19 293 1 3974 204 89 11 chr2 225343598 225344635 -25343219 - L1MC4a LINE L1 -9 7799 6682 * 6773 71 9 6 chr2 225344628 225346200 -25341654 + L1PA8 LINE L1 4599 6173 0 1212 254 97 10 chr2 225346200 225346590 -25341264 - L1MC4 LINE L1 -1256 6786 6363 742 276 122 27 chr2 225346592 225347424 -25340430 - L1MEd LINE L1 -4348 1962 992 1250 203 0 0 chr2 225347445 225347657 -25340197 - AluJb SINE Alu -22 290 79 369 326 42 50 chr2 225347691 225347930 -25339924 - L1MEd LINE L1 -5174 945 709 1529 216 82 101 chr2 225347942 225348697 -25339157 - HsTC2a DNA Tc2 -2 742 2 1223 146 150 30 chr2 225349115 225349382 -25338472 - AluSg SINE Alu -1 299 1 1972 132 7 13 chr2 225349418 225349721 -25338133 - AluSx SINE Alu -11 301 1 25 51 0 0 chr2 225349721 225349760 -25338094 + AT_rich Low_complexity Low_complexity 1 39 0 252 284 35 103 chr2 225349762 225349825 -25338029 - L1MC4 LINE L1 -270 7772 7706 2114 121 0 7 chr2 225349825 225350131 -25337723 - AluSp SINE Alu -9 304 1 252 284 35 103 chr2 225350131 225350328 -25337526 - L1MC4 LINE L1 -336 7706 7530 2571 142 35 24 chr2 225350331 225350754 -25337100 + MSTA LTR MaLR 1 428 0 559 297 120 94 chr2 225350792 225350806 -25337048 - L1M4 LINE L1 -1202 4944 4932 2708 87 19 3 chr2 225350806 225351175 -25336679 - L1PA8 LINE L1 0 6172 5798 559 297 120 94 chr2 225351175 225351368 -25336486 - L1M4 LINE L1 -1214 4932 4745 1757 144 0 11 chr2 225351368 225351652 -25336202 - AluJb SINE Alu -26 286 6 559 297 120 94 chr2 225351652 225351760 -25336094 - L1M4 LINE L1 -1401 4745 4641 1471 221 0 0 chr2 225351760 225352059 -25335795 + AluJo SINE Alu 1 299 -13 559 297 120 94 chr2 225352059 225352293 -25335561 - L1M4 LINE L1 -1505 4641 4379 233 71 167 0 chr2 225352293 225352335 -25335519 - MER46A DNA MER2_type 0 236 188 1007 96 0 7 chr2 225352335 225352471 -25335383 + AluSq/x SINE Alu 1 135 -177 2154 80 45 0 chr2 225352473 225352759 -25335095 + AluSq SINE Alu 1 299 -14 648 160 58 122 chr2 225352759 225352947 -25334907 - MER46A DNA MER2_type -60 176 1 315 284 49 10 chr2 225352947 225353049 -25334805 - L1M4 LINE L1 -1771 4375 4270 803 177 14 14 chr2 225353056 225353197 -25334657 - BC200 scRNA scRNA -59 141 1 346 265 74 31 chr2 225353208 225353370 -25334484 - L1M4 LINE L1 -1863 4283 4115 228 289 86 8 chr2 225353570 225353698 -25334156 - L1M4 LINE L1 -2324 3822 3685 764 160 0 8 chr2 225353755 225353874 -25333980 - FLAM_C SINE Alu -20 123 6 2045 116 0 7 chr2 225354089 225354391 -25333463 - AluSx SINE Alu -12 300 1 319 291 127 68 chr2 225354640 225354680 -25333174 - HAL1 LINE L1 -842 1665 1629 1882 149 0 10 chr2 225354680 225354982 -25332872 + AluJb SINE Alu 1 299 -13 319 291 127 68 chr2 225354982 225355161 -25332693 - HAL1 LINE L1 -878 1629 1433 4182 76 17 2 chr2 225355171 225355711 -25332143 - L1PA13 LINE L1 -2 6161 5614 2122 120 7 0 chr2 225355711 225356012 -25331842 - AluSx SINE Alu -8 304 2 345 231 115 23 chr2 225356021 225356151 -25331703 - MIR3 SINE MIR -64 144 3 2089 131 10 0 chr2 225356879 225357184 -25330670 - AluSx SINE Alu -4 308 1 1076 128 0 79 chr2 225357187 225357241 -25330613 - AluJo SINE Alu -125 187 130 2256 75 3 3 chr2 225357241 225357533 -25330321 - AluY SINE Alu -19 292 1 1076 128 0 79 chr2 225357533 225357681 -25330173 - AluJo SINE Alu -182 130 1 268 254 115 31 chr2 225357682 225357812 -25330042 + Charlie8 DNA MER1_type 124 264 -2153 2262 95 0 7 chr2 225357953 225358257 -25329597 - AluSx SINE Alu -10 302 1 752 181 22 60 chr2 225358314 225358496 -25329358 - MER96 DNA MER1_type 0 175 1 242 364 0 0 chr2 225359141 225359229 -25328625 - L2 LINE L2 -6 3266 3179 2009 104 11 4 chr2 225359309 225359587 -25328267 - AluSq SINE Alu -19 294 15 342 352 11 6 chr2 225361056 225361232 -25326622 + (TTGGGG)n Simple_repeat Simple_repeat 2 178 0 2076 108 13 19 chr2 225361698 225362005 -25325849 + AluSq SINE Alu 1 305 -8 483 182 106 7 chr2 225362297 225362436 -25325418 + MIR SINE MIR 35 183 -63 258 250 29 0 chr2 225362862 225362930 -25324924 - L3 LINE CR1 -77 1500 1431 2098 114 10 0 chr2 225363720 225364018 -25323836 - AluSx SINE Alu -11 301 1 214 254 49 119 chr2 225364394 225364555 -25323299 - L2 LINE L2 -54 3259 3111 2263 97 7 0 chr2 225364555 225364855 -25322999 + AluSx SINE Alu 1 302 -10 214 254 49 119 chr2 225364855 225364878 -25322976 - L2 LINE L2 -202 3111 3088 388 301 244 31 chr2 225364931 225365154 -25322700 - L2 LINE L2 -348 2966 2792 2112 94 3 0 chr2 225365154 225365440 -25322414 + AluSq SINE Alu 1 287 -26 388 301 244 31 chr2 225365440 225365834 -25322020 - L2 LINE L2 -522 2792 2217 766 199 60 20 chr2 225365925 225366076 -25321778 - FRAM SINE Alu -19 157 1 453 233 72 2 chr2 225366490 225366628 -25321226 - MIR SINE MIR -67 141 4 2236 87 13 0 chr2 225366643 225366943 -25320911 - AluSx SINE Alu -8 304 1 1957 149 0 0 chr2 225367102 225367403 -25320451 - AluSx SINE Alu -11 301 1 2174 100 7 3 chr2 225367412 225367713 -25320141 - AluSq SINE Alu -11 302 1 346 250 174 30 chr2 225367744 225367876 -25319978 - MER5A DNA MER1_type 0 189 39 2169 113 0 0 chr2 225368138 225368439 -25319415 + AluSx SINE Alu 1 301 -11 2251 94 3 3 chr2 225368444 225368753 -25319101 + AluSq SINE Alu 1 309 -4 530 275 82 13 chr2 225368886 225369119 -25318735 - L1MC4a LINE L1 -1839 5969 5721 336 237 3 0 chr2 225369119 225369207 -25318647 + AluJ/FLAM SINE Alu 1 64 -238 964 48 8 0 chr2 225369207 225369333 -25318521 + AluY SINE Alu 171 297 -14 1937 118 17 17 chr2 225369359 225369655 -25318199 + AluSg SINE Alu 1 296 -14 189 0 0 0 chr2 225369744 225369765 -25318089 + (TG)n Simple_repeat Simple_repeat 2 22 0 1957 114 7 29 chr2 225369940 225370246 -25317608 - AluSx SINE Alu -13 299 1 1831 148 13 13 chr2 225370447 225370758 -25317096 + AluJo SINE Alu 1 311 -1 278 309 119 67 chr2 225370895 225371105 -25316749 + L2 LINE L2 3042 3262 -10 25 65 0 0 chr2 225371887 225371933 -25315921 + GC_rich Low_complexity Low_complexity 1 46 0 255 140 53 18 chr2 225372928 225372985 -25314869 + L2 LINE L2 3213 3271 -1 451 250 52 35 chr2 225374229 225374299 -25313555 + MER112 DNA MER1_type 75 142 -118 1862 156 3 0 chr2 225374299 225374594 -25313260 - AluJb SINE Alu -16 296 1 451 250 52 35 chr2 225374594 225374695 -25313159 + MER112 DNA MER1_type 142 249 -11 206 203 0 47 chr2 225375815 225375879 -25311975 + MIR SINE MIR 82 142 -66 23 0 0 0 chr2 225378230 225378253 -25309601 + GC_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 225378431 225378459 -25309395 + GC_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr2 225379775 225379810 -25308044 + GC_rich Low_complexity Low_complexity 1 35 0 295 228 76 11 chr2 225380172 225380264 -25307590 - MIR SINE MIR -118 144 47 183 273 36 0 chr2 225380952 225381007 -25306847 + MIR SINE MIR 115 171 -91 260 325 41 41 chr2 225381549 225381672 -25306182 + L2 LINE L2 3127 3249 -23 1556 138 54 4 chr2 225382727 225382988 -25304866 + AluSx SINE Alu 1 274 -38 207 100 0 0 chr2 225383002 225383032 -25304822 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 272 289 144 10 chr2 225383186 225383283 -25304571 - MIR SINE MIR -44 218 109 657 274 15 20 chr2 225384072 225384276 -25303578 + MIR SINE MIR 17 219 -43 342 188 281 0 chr2 225384549 225384645 -25303209 + MIR SINE MIR 28 150 -112 853 164 5 96 chr2 225384646 225384712 -25303142 + AluJb SINE Alu 87 157 -155 2267 92 0 3 chr2 225384712 225385006 -25302848 + AluSq SINE Alu 10 302 -11 853 164 5 96 chr2 225385006 225385147 -25302707 + AluJb SINE Alu 157 275 -37 270 279 31 0 chr2 225385730 225385815 -25302039 + MIR SINE MIR 66 146 -62 1610 136 95 4 chr2 225385845 225386118 -25301736 + AluJo SINE Alu 1 298 -14 2249 78 23 3 chr2 225386118 225386424 -25301430 + AluSp SINE Alu 1 313 0 969 113 0 0 chr2 225386425 225386558 -25301296 + AluSg SINE Alu 1 133 -177 2239 100 6 0 chr2 225386558 225386869 -25300985 + AluSq SINE Alu 1 313 0 359 246 36 128 chr2 225387357 225387441 -25300413 + Charlie8 DNA MER1_type 1 58 -283 866 124 0 29 chr2 225387441 225387578 -25300276 - FLAM_C SINE Alu 0 133 1 359 246 36 128 chr2 225387578 225387688 -25300166 + Charlie8 DNA MER1_type 58 177 -164 278 253 24 0 chr2 225387790 225387873 -25299981 - MIR SINE MIR -59 149 65 711 248 138 21 chr2 225388028 225388318 -25299536 + L2 LINE L2 2988 3311 -2 220 258 40 73 chr2 225388847 225388909 -25298945 + L2 LINE L2 2835 2898 -415 1582 169 39 4 chr2 225388909 225389188 -25298666 - AluJo SINE Alu -14 298 10 220 258 40 73 chr2 225389188 225389276 -25298578 + L2 LINE L2 2898 2980 -333 243 0 0 0 chr2 225389346 225389373 -25298481 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1466 124 70 44 chr2 225389375 225389648 -25298206 - AluJb SINE Alu -32 280 1 2112 87 0 32 chr2 225389654 225389966 -25297888 - AluSg SINE Alu -8 302 1 250 272 12 49 chr2 225389979 225390060 -25297794 + L2 LINE L2 3159 3236 -77 2404 58 0 10 chr2 225390081 225390390 -25297464 - AluSc SINE Alu -3 306 1 672 275 104 0 chr2 225390976 225391187 -25296667 - MIR SINE MIR -2 260 28 256 256 43 60 chr2 225391486 225391603 -25296251 + MIR3 SINE MIR 3 117 -91 2390 64 3 0 chr2 225392009 225392307 -25295547 - AluSp SINE Alu -14 299 1 2049 132 0 0 chr2 225392787 225393098 -25294756 + AluSx SINE Alu 1 311 -1 827 133 15 15 chr2 225393456 225393591 -25294263 + AluJo SINE Alu 2 136 -176 1941 97 50 0 chr2 225393592 225393893 -25293961 + AluSx SINE Alu 2 316 0 2135 108 0 0 chr2 225394698 225394993 -25292861 + AluSx SINE Alu 1 295 -17 312 91 0 0 chr2 225396532 225396576 -25291278 + (CA)n Simple_repeat Simple_repeat 1 44 0 180 377 14 0 chr2 225396751 225396820 -25291034 + MIR SINE MIR 49 118 -90 545 92 0 133 chr2 225396851 225396971 -25290883 - AluJo/FRAM SINE Alu 0 312 209 1152 142 0 0 chr2 225396971 225397140 -25290714 - AluSg/x SINE Alu -14 298 130 228 35 0 0 chr2 225397140 225397169 -25290685 + (TATG)n Simple_repeat Simple_repeat 2 30 0 1978 126 0 3 chr2 225397173 225397459 -25290395 - AluSx SINE Alu -27 285 1 532 184 18 9 chr2 225397461 225397570 -25290284 - L1MD3 LINE L1 -2 7993 7884 2095 98 33 13 chr2 225397721 225398026 -25289828 - AluY SINE Alu 0 311 1 2274 100 0 0 chr2 225398028 225398337 -25289517 - AluSx SINE Alu -3 309 1 227 323 40 24 chr2 225398674 225398798 -25289056 - LTR67 LTR ERVL 0 557 432 370 299 22 8 chr2 225399290 225399424 -25288430 - LTR16A1 LTR ERVL -2 455 320 1662 119 0 0 chr2 225399526 225399769 -25288085 + AluSc SINE Alu 48 290 -19 2469 49 0 3 chr2 225400172 225400477 -25287377 + AluY SINE Alu 1 304 -7 1544 174 20 26 chr2 225400480 225400784 -25287070 + AluSx SINE Alu 1 302 -10 216 0 0 0 chr2 225401538 225401562 -25286292 + (T)n Simple_repeat Simple_repeat 1 24 0 868 138 0 0 chr2 225401744 225401867 -25285987 + AluJb SINE Alu 1 123 -189 2166 109 0 0 chr2 225402531 225402858 -25284996 - AluSx SINE Alu 0 312 1 813 167 0 8 chr2 225402893 225403019 -25284835 + FLAM_C SINE Alu 2 126 -17 1829 112 0 0 chr2 225403027 225403287 -25284567 - AluSx SINE Alu -18 294 35 246 156 0 0 chr2 225403559 225403604 -25284250 + T-rich Low_complexity Low_complexity 1 45 0 361 125 36 0 chr2 225403906 225403962 -25283892 - MER66B LTR ERV1 -140 346 289 271 260 13 52 chr2 225404757 225404834 -25283020 + L2 LINE L2 3189 3262 -10 1398 166 106 3 chr2 225405244 225405527 -25282327 + AluJo SINE Alu 1 312 0 368 326 30 15 chr2 225405722 225405857 -25281997 - MER5A DNA MER1_type -9 180 44 320 301 171 0 chr2 225406120 225406243 -25281611 - MIR3 SINE MIR 0 208 65 438 278 278 5 chr2 225406421 225406619 -25281235 + MIR SINE MIR 11 262 0 1742 65 19 11 chr2 225406772 225407033 -25280821 - AluY SINE Alu -4 307 45 2344 61 3 0 chr2 225407034 225407328 -25280526 - AluY SINE Alu -16 295 1 1866 114 0 17 chr2 225407867 225408156 -25279698 + AluJo SINE Alu 1 284 -28 249 263 91 30 chr2 225408579 225408678 -25279176 - MIR3 SINE MIR -5 203 99 2057 114 3 3 chr2 225408986 225409285 -25278569 - AluSx SINE Alu -13 299 1 2256 86 3 3 chr2 225409511 225409814 -25278040 - AluSx SINE Alu -9 303 1 1738 162 0 20 chr2 225410074 225410370 -25277484 - AluJb SINE Alu -22 290 1 1077 136 51 0 chr2 225410482 225410658 -25277196 - AluSg/x SINE Alu -11 299 115 1903 151 7 0 chr2 225410728 225411032 -25276822 + AluJb SINE Alu 1 306 -6 1915 136 10 7 chr2 225411033 225411328 -25276526 + AluSx SINE Alu 1 296 -16 189 189 27 0 chr2 225411330 225411367 -25276487 - MIR SINE MIR -116 146 109 1912 139 7 0 chr2 225411473 225411767 -25276087 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr2 225413806 225413827 -25274027 + AT_rich Low_complexity Low_complexity 1 21 0 34 24 0 0 chr2 225415113 225415154 -25272700 + AT_rich Low_complexity Low_complexity 1 41 0 770 136 0 16 chr2 225415997 225416122 -25271732 - AluSg/x SINE Alu 0 309 187 237 33 0 0 chr2 225417362 225417392 -25270462 + (TG)n Simple_repeat Simple_repeat 2 31 0 2272 91 0 0 chr2 225418514 225418811 -25269043 + AluSg SINE Alu 1 297 -13 1778 132 3 43 chr2 225418915 225419240 -25268614 + AluJo SINE Alu 1 312 0 2109 104 0 13 chr2 225419436 225419734 -25268120 + AluSg SINE Alu 1 294 -16 279 0 0 0 chr2 225420295 225420326 -25267528 + (TC)n Simple_repeat Simple_repeat 2 32 0 2079 98 30 3 chr2 225421321 225421616 -25266238 + AluSx SINE Alu 1 303 -9 1709 151 15 52 chr2 225421624 225421948 -25265906 + AluJb SINE Alu 1 312 0 933 92 15 0 chr2 225421957 225422087 -25265767 + AluSp SINE Alu 1 132 -181 2160 101 0 16 chr2 225422089 225422397 -25265457 + AluSg SINE Alu 1 303 -7 2049 123 3 19 chr2 225422840 225423157 -25264697 - AluSx SINE Alu 0 312 1 1982 83 7 31 chr2 225423161 225423483 -25264371 - AluSg SINE Alu 0 315 1 1378 94 0 39 chr2 225423730 225423861 -25263993 - MER4A LTR ERV1 0 664 542 2230 89 3 3 chr2 225423861 225424165 -25263689 - AluSp SINE Alu -9 304 1 1378 94 0 39 chr2 225424165 225424236 -25263618 - MER4A LTR ERV1 -122 542 470 1377 62 0 6 chr2 225424244 225424422 -25263432 + AluY SINE Alu 118 294 -17 1237 106 30 75 chr2 225424422 225424855 -25262999 - MER4A LTR ERV1 -180 484 1 820 120 15 15 chr2 225424929 225425062 -25262792 + FLAM_C SINE Alu 1 133 0 2125 97 10 7 chr2 225425107 225425406 -25262448 + AluSx SINE Alu 1 300 -12 1829 105 29 4 chr2 225425406 225425683 -25262171 + AluSq SINE Alu 14 297 -16 2378 61 0 19 chr2 225426232 225426545 -25261309 + AluY SINE Alu 1 307 -4 2110 109 0 19 chr2 225426554 225426867 -25260987 + AluSx SINE Alu 1 307 -5 2382 75 7 0 chr2 225428165 225428471 -25259383 + AluY SINE Alu 1 308 -3 750 164 0 0 chr2 225428650 225428772 -25259082 - AluJo SINE Alu -69 243 122 222 115 49 33 chr2 225428807 225428868 -25258986 + CT-rich Low_complexity Low_complexity 3 64 0 1824 134 4 0 chr2 225428868 225429136 -25258718 - AluSx SINE Alu -32 280 12 1968 127 7 3 chr2 225429165 225429457 -25258397 - AluSx SINE Alu -19 293 1 1342 181 36 69 chr2 225429657 225429989 -25257865 - MLT1A2 LTR MaLR -6 368 48 366 276 138 0 chr2 225431238 225431354 -25256500 - MIR SINE MIR -109 153 22 2276 72 13 0 chr2 225431354 225431660 -25256194 + AluSg SINE Alu 1 310 0 271 306 75 7 chr2 225432290 225432437 -25255417 - L1ME4a LINE L1 -8 6113 5957 1424 191 17 17 chr2 225432520 225432819 -25255035 - AluJb SINE Alu -13 299 1 779 167 8 0 chr2 225432829 225432961 -25254893 - FLAM_C SINE Alu 0 133 1 440 231 88 34 chr2 225432965 225433112 -25254742 - L1ME4a LINE L1 -393 5728 5574 241 312 13 0 chr2 225433137 225433214 -25254640 - L2 LINE L2 -296 2976 2899 229 189 0 0 chr2 225433221 225433258 -25254596 + MER3 DNA MER1_type 1 37 -172 587 215 151 27 chr2 225433262 225433513 -25254341 - L2 LINE L2 -252 3061 2784 1748 160 3 13 chr2 225433837 225434143 -25253711 + AluJo SINE Alu 1 303 -9 1203 200 19 57 chr2 225434434 225434556 -25253298 + AluJo SINE Alu 3 128 -184 1950 134 0 0 chr2 225434556 225434846 -25253008 - AluSx SINE Alu -18 294 5 1203 200 19 57 chr2 225434846 225435038 -25252816 + AluJo SINE Alu 128 305 -7 710 227 116 0 chr2 225435076 225435248 -25252606 - MIR SINE MIR -67 195 4 2189 78 3 0 chr2 225435373 225435679 -25252175 - AluSp SINE Alu 0 307 1 579 242 30 69 chr2 225435739 225435970 -25251884 - L2 LINE L2 -169 3103 2882 2370 67 0 3 chr2 225436177 225436476 -25251378 + AluY SINE Alu 1 298 -13 2043 84 30 17 chr2 225436483 225436781 -25251073 + AluSg SINE Alu 1 302 -8 1683 112 0 88 chr2 225436985 225437232 -25250622 - Tigger3(Golem) DNA MER2_type -2 3027 2808 2351 87 0 0 chr2 225437232 225437542 -25250312 + AluY SINE Alu 1 310 -1 1683 112 0 88 chr2 225437542 225437588 -25250266 - Tigger3(Golem) DNA MER2_type -221 2808 2760 1716 88 4 0 chr2 225437595 225437823 -25250031 + AluSg SINE Alu 1 229 -81 405 113 0 0 chr2 225437823 225437876 -25249978 - Alu SINE Alu -256 54 2 1661 168 7 13 chr2 225437924 225438228 -25249626 - AluJb SINE Alu -10 302 1 475 94 0 0 chr2 225438228 225438292 -25249562 - L1MC/D LINE L1 -548 5694 5631 * 1360 136 14 0 chr2 225438285 225438505 -25249349 - L1MC/D LINE L1 -435 5807 5585 1583 204 0 0 chr2 225438511 225438800 -25249054 + AluJo SINE Alu 1 289 -23 7946 128 37 19 chr2 225438909 225439901 -25247953 + Tigger1 DNA MER2_type 1068 2041 -377 2280 103 0 3 chr2 225439901 225440212 -25247642 + AluSg SINE Alu 1 310 0 7946 128 37 19 chr2 225440212 225440363 -25247491 + Tigger1 DNA MER2_type 2041 2188 -230 1654 164 7 3 chr2 225440363 225440655 -25247199 + AluJb SINE Alu 1 293 -19 7946 128 37 19 chr2 225440655 225440835 -25247019 + Tigger1 DNA MER2_type 2188 2416 -2 357 284 75 15 chr2 225440957 225441091 -25246763 - HAL1 LINE L1 -145 2362 2221 302 174 92 61 chr2 225441191 225441289 -25246565 - HAL1b LINE L1 -499 849 749 1978 142 0 16 chr2 225441922 225442239 -25245615 + AluSx SINE Alu 1 312 0 2342 81 0 7 chr2 225442799 225443095 -25244759 + AluSg SINE Alu 1 294 -16 2064 105 9 46 chr2 225443146 225443290 -25244564 + AluSq SINE Alu 1 149 -164 2377 82 3 0 chr2 225443290 225443583 -25244271 + AluY SINE Alu 1 294 -17 2064 105 9 46 chr2 225443583 225443763 -25244091 + AluSq SINE Alu 149 313 0 548 253 7 7 chr2 225444330 225444476 -25243378 + LTR16A1 LTR ERVL 312 457 0 572 207 21 14 chr2 225444721 225444866 -25242988 + L1MB7 LINE L1 6038 6183 -1 1268 229 76 71 chr2 225444867 225445354 -25242500 + MLT1H LTR MaLR 19 541 -8 573 311 32 39 chr2 225445497 225445777 -25242077 + ERVL LTR ERVL 3213 3490 -2164 1546 324 84 23 chr2 225445802 225446523 -25241331 + ERVL LTR ERVL 3595 4270 -1215 4189 163 5 73 chr2 225446523 225446681 -25241173 - MER44D DNA MER2_type -1882 605 438 1772 171 31 0 chr2 225446681 225446974 -25240880 - AluJb SINE Alu -10 302 1 4189 163 5 73 chr2 225446974 225447148 -25240706 - MER44D DNA MER2_type -2049 438 254 1978 153 7 0 chr2 225447148 225447442 -25240412 + AluJb SINE Alu 1 296 -16 2203 111 0 0 chr2 225447445 225447734 -25240120 + AluSg SINE Alu 1 289 -21 4189 163 5 73 chr2 225447734 225448071 -25239783 - MER44D DNA MER2_type -2235 252 117 1537 171 33 40 chr2 225448071 225448370 -25239484 + AluJo SINE Alu 1 297 -15 4189 163 5 73 chr2 225448370 225448479 -25239375 - MER44D DNA MER2_type -2370 117 2 1546 324 84 23 chr2 225448479 225448720 -25239134 + ERVL LTR ERVL 4270 4616 -869 834 312 78 65 chr2 225448792 225449378 -25238476 + ERVL LTR ERVL 4735 5328 -157 502 288 117 69 chr2 225449650 225449983 -25237871 + LTR16A1 LTR ERVL 107 455 -2 238 323 40 24 chr2 225450475 225450599 -25237255 + LTR67 LTR ERVL 432 557 0 2390 100 0 0 chr2 225450936 225451245 -25236609 + AluSx SINE Alu 1 309 -3 2206 98 33 13 chr2 225451247 225451552 -25236302 + AluY SINE Alu 1 311 0 564 174 18 9 chr2 225451703 225451812 -25236042 + L1MD3 LINE L1 7884 7993 -2 2243 110 0 16 chr2 225451814 225452123 -25235731 + AluSx SINE Alu 1 304 -8 225 0 0 0 chr2 225452123 225452148 -25235706 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 279 0 0 0 chr2 225452147 225452178 -25235676 + (GA)n Simple_repeat Simple_repeat 2 32 0 917 290 85 19 chr2 225452919 225453226 -25234628 + MLT1J LTR MaLR 97 423 -88 22 0 0 0 chr2 225453582 225453604 -25234250 + AT_rich Low_complexity Low_complexity 1 22 0 2029 115 7 14 chr2 225454149 225454435 -25233419 - AluSc SINE Alu -25 284 1 806 206 65 12 chr2 225454891 225455061 -25232793 + AluJo SINE Alu 120 298 -14 436 260 20 10 chr2 225455075 225455128 -25232726 - MER5B DNA MER1_type -71 107 51 194 0 0 37 chr2 225455128 225455155 -25232699 + (TTG)n Simple_repeat Simple_repeat 2 27 0 436 260 20 10 chr2 225455155 225455201 -25232653 - MER5B DNA MER1_type -127 51 7 180 0 0 0 chr2 225455300 225455320 -25232534 + (A)n Simple_repeat Simple_repeat 1 20 0 227 190 35 35 chr2 225455953 225456011 -25231843 - L1MC4a LINE L1 -1866 5942 5885 1872 153 3 11 chr2 225456072 225456359 -25231495 - AluJb SINE Alu -27 285 1 527 257 77 6 chr2 225456360 225456543 -25231311 + MER112 DNA MER1_type 32 227 -33 726 268 64 42 chr2 225456637 225456950 -25230904 + L1ME1 LINE L1 5844 6163 -3 2284 104 3 0 chr2 225457181 225457480 -25230374 - AluSx SINE Alu -12 300 1 23 0 0 0 chr2 225457635 225457658 -25230196 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 225457692 225457714 -25230140 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr2 225458118 225458167 -25229687 + AT_rich Low_complexity Low_complexity 1 49 0 255 61 0 0 chr2 225458334 225458367 -25229487 + (A)n Simple_repeat Simple_repeat 1 33 0 198 329 61 0 chr2 225458985 225459067 -25228787 - MIR SINE MIR -57 151 65 382 299 116 37 chr2 225459083 225459324 -25228530 - MIR SINE MIR -2 260 1 2480 71 0 0 chr2 225459514 225459810 -25228044 - AluY SINE Alu -15 296 1 772 193 28 55 chr2 225460154 225460335 -25227519 + FRAM SINE Alu 1 176 0 534 150 0 25 chr2 225460565 225460682 -25227172 + AluSg/x SINE Alu 209 309 0 2530 194 8 4 chr2 225460718 225461198 -25226656 - L1 LINE L1 -1911 4235 3754 631 158 180 7 chr2 225461875 225462014 -25225840 + MER6B DNA MER2_type 47 209 -1 2115 137 0 0 chr2 225462183 225462482 -25225372 + AluSx SINE Alu 1 299 -13 24 53 0 0 chr2 225463075 225463113 -25224741 + AT_rich Low_complexity Low_complexity 1 38 0 2490 84 3 0 chr2 225464222 225464532 -25223322 - AluSq SINE Alu -2 311 1 1536 161 88 22 chr2 225464615 225464888 -25222966 - AluJo SINE Alu -21 291 1 2421 91 0 0 chr2 225465366 225465673 -25222181 + AluY SINE Alu 1 307 -4 2491 83 0 13 chr2 225465797 225466111 -25221743 + AluSg SINE Alu 1 310 0 492 212 29 80 chr2 225467169 225467306 -25220548 - AluJb SINE Alu -69 243 114 1551 150 131 15 chr2 225467307 225467581 -25220273 + AluSx SINE Alu 1 306 -6 637 217 0 17 chr2 225467599 225467714 -25220140 + AluJo/FLAM SINE Alu 4 116 -196 954 211 0 0 chr2 225467714 225467875 -25219979 - AluJb SINE Alu -21 291 131 14462 133 48 24 chr2 225468245 225470270 -25217584 + Tigger1 DNA MER2_type 1 1975 -443 2385 103 0 3 chr2 225470270 225470580 -25217274 + AluSg SINE Alu 1 309 -1 14462 133 48 24 chr2 225470580 225470731 -25217123 + Tigger1 DNA MER2_type 1975 2121 -297 1741 164 7 3 chr2 225470731 225471023 -25216831 + AluJb SINE Alu 1 293 -19 14462 133 48 24 chr2 225471023 225471203 -25216651 + Tigger1 DNA MER2_type 2121 2416 -2 307 284 75 15 chr2 225471325 225471459 -25216395 - HAL1 LINE L1 -145 2362 2221 2088 139 0 22 chr2 225472290 225472607 -25215247 + AluSx SINE Alu 1 310 -2 2342 81 0 7 chr2 225473167 225473463 -25214391 + AluSg SINE Alu 1 294 -16 2075 100 9 47 chr2 225473514 225473658 -25214196 + AluSq SINE Alu 1 149 -164 2367 82 3 0 chr2 225473658 225473950 -25213904 + AluY SINE Alu 1 293 -18 2075 100 9 47 chr2 225473950 225474126 -25213728 + AluSq SINE Alu 149 309 -4 548 253 7 7 chr2 225474698 225474844 -25213010 + LTR16A1 LTR ERVL 312 457 0 572 207 21 14 chr2 225475089 225475234 -25212620 + L1MB7 LINE L1 6038 6183 -1 1268 229 76 71 chr2 225475235 225475722 -25212132 + MLT1H LTR MaLR 19 541 -8 552 314 32 39 chr2 225475865 225476145 -25211709 + ERVL LTR ERVL 3213 3490 -2164 1509 324 85 23 chr2 225476170 225476890 -25210964 + ERVL LTR ERVL 3595 4269 -1216 4189 163 5 73 chr2 225476890 225477048 -25210806 - MER44D DNA MER2_type -1882 605 438 1772 171 31 0 chr2 225477048 225477341 -25210513 - AluJb SINE Alu -10 302 1 4189 163 5 73 chr2 225477341 225477515 -25210339 - MER44D DNA MER2_type -2049 438 254 1978 153 7 0 chr2 225477515 225477809 -25210045 + AluJb SINE Alu 1 296 -16 2203 111 0 0 chr2 225477812 225478101 -25209753 + AluSg SINE Alu 1 289 -21 4189 163 5 73 chr2 225478101 225478438 -25209416 - MER44D DNA MER2_type -2235 252 117 1537 171 33 40 chr2 225478438 225478737 -25209117 + AluJo SINE Alu 1 297 -15 4189 163 5 73 chr2 225478737 225478846 -25209008 - MER44D DNA MER2_type -2370 117 2 1509 324 85 23 chr2 225478846 225479087 -25208767 + ERVL LTR ERVL 4269 4616 -869 834 312 78 65 chr2 225479159 225479745 -25208109 + ERVL LTR ERVL 4735 5328 -157 532 289 118 66 chr2 225480017 225480349 -25207505 + LTR16A1 LTR ERVL 107 455 -2 238 323 40 24 chr2 225480841 225480965 -25206889 + LTR67 LTR ERVL 432 557 0 232 152 43 22 chr2 225480979 225481025 -25206829 + MLT1H-int LTR MaLR 16 62 -1309 2365 104 0 0 chr2 225481302 225481610 -25206244 + AluSx SINE Alu 1 308 -4 2198 99 33 13 chr2 225481612 225481916 -25205938 + AluY SINE Alu 1 310 -1 564 174 18 9 chr2 225482068 225482177 -25205677 + L1MD3 LINE L1 7884 7993 -2 2254 110 0 19 chr2 225482179 225482497 -25205357 + AluSx SINE Alu 1 312 0 1493 187 11 21 chr2 225483578 225483887 -25203967 + AluJo SINE Alu 1 306 0 1491 167 82 20 chr2 225484272 225484566 -25203288 + AluJb SINE Alu 1 312 0 2006 130 0 7 chr2 225485011 225485319 -25202535 - AluSq SINE Alu 0 306 1 2275 110 0 7 chr2 225485431 225485739 -25202115 - AluSg SINE Alu -4 306 1 2135 102 0 31 chr2 225485742 225486071 -25201783 - AluSx SINE Alu 0 320 1 873 177 20 94 chr2 225486590 225486793 -25201061 - MER5A DNA MER1_type -1 188 1 2071 124 3 0 chr2 225486814 225487123 -25200731 + AluSx SINE Alu 1 310 0 327 254 100 18 chr2 225487226 225487336 -25200518 - L1MC/D LINE L1 -559 5683 5565 2281 107 0 7 chr2 225487362 225487672 -25200182 + AluY SINE Alu 2 309 -2 1500 208 95 71 chr2 225487674 225488153 -25199701 - L1MC4 LINE L1 0 8042 7576 1621 166 49 0 chr2 225488153 225488437 -25199417 - AluJb SINE Alu -14 298 1 1952 150 3 13 chr2 225488439 225488615 -25199239 - AluSx SINE Alu -8 304 128 240 35 0 0 chr2 225488615 225488644 -25199210 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1837 122 48 7 chr2 225488644 225488914 -25198940 - AluSg SINE Alu -29 281 1 1952 150 3 13 chr2 225488914 225489043 -25198811 - AluSx SINE Alu -182 130 1 1500 208 95 71 chr2 225489043 225489107 -25198747 - L1MC4 LINE L1 -466 7576 7483 1091 93 0 182 chr2 225489168 225489404 -25198450 - 7SK RNA RNA 0 193 1 1778 167 11 7 chr2 225489409 225489696 -25198158 - AluJb SINE Alu -13 299 12 264 272 37 25 chr2 225489711 225489792 -25198062 - L1MC4 LINE L1 -598 7444 7363 1183 251 137 116 chr2 225489804 225491802 -25196052 + L1MEc LINE L1 38 2087 -4309 2360 88 7 0 chr2 225491802 225492107 -25195747 + AluSp SINE Alu 1 307 -6 1183 251 137 116 chr2 225492107 225492308 -25195546 + L1MEc LINE L1 2087 2282 -4114 713 222 53 29 chr2 225492331 225492538 -25195316 + L1MEc LINE L1 2379 2590 -3625 1657 191 3 32 chr2 225492793 225493102 -25194752 - AluJo SINE Alu -12 300 1 834 199 0 0 chr2 225493113 225493254 -25194600 - FLAM_C SINE Alu -2 141 1 772 281 85 64 chr2 225493259 225493400 -25194454 - HAL1b LINE L1 -440 908 771 1707 189 0 14 chr2 225493400 225493686 -25194168 - AluJb SINE Alu -30 282 1 772 281 85 64 chr2 225493686 225494230 -25193624 - HAL1b LINE L1 -577 771 240 1918 151 3 7 chr2 225494230 225494529 -25193325 - AluJo SINE Alu -13 299 2 772 281 85 64 chr2 225494529 225494653 -25193201 - HAL1b LINE L1 -1108 240 101 2254 102 20 0 chr2 225494653 225494948 -25192906 - AluSx SINE Alu -11 301 1 772 281 85 64 chr2 225494948 225495018 -25192836 - HAL1b LINE L1 -1247 101 34 2232 88 3 7 chr2 225495162 225495446 -25192408 - AluSx SINE Alu -14 298 16 1910 133 14 0 chr2 225495514 225495821 -25192033 - AluSx SINE Alu 0 311 1 604 276 69 35 chr2 225497580 225497812 -25190042 + MIR SINE MIR 2 241 -21 816 150 55 0 chr2 225497831 225497958 -25189896 + AluJo SINE Alu 2 135 -177 351 278 84 41 chr2 225498892 225499075 -25188779 - L1ME LINE L1 -463 5641 5441 1706 183 0 7 chr2 225499075 225499376 -25188478 + AluSx SINE Alu 2 300 -12 351 278 84 41 chr2 225499376 225499485 -25188369 - L1ME LINE L1 -663 5441 5338 1945 132 3 40 chr2 225499510 225499676 -25188178 - AluSx SINE Alu -19 293 141 2347 84 0 3 chr2 225499676 225499973 -25187881 - AluSq SINE Alu -17 296 1 1945 132 3 40 chr2 225499973 225500110 -25187744 - AluSx SINE Alu -171 141 1 250 260 19 124 chr2 225500142 225500407 -25187447 - L1ME LINE L1 -1005 5124 4888 626 176 93 9 chr2 225500464 225500572 -25187282 + FLAM_C SINE Alu 2 118 -25 2173 113 0 19 chr2 225500587 225500905 -25186949 + AluSx SINE Alu 1 312 0 333 281 110 0 chr2 225501114 225501260 -25186594 - L1ME LINE L1 -3829 2300 2139 373 278 80 37 chr2 225501282 225501444 -25186410 - L1ME LINE L1 -4122 2188 2020 1296 172 5 9 chr2 225501479 225501694 -25186160 - AluJo SINE Alu -98 214 1 1690 191 36 53 chr2 225501749 225502162 -25185692 - L1ME1 LINE L1 -5 6161 5756 1895 152 0 30 chr2 225502179 225502481 -25185373 - AluJb SINE Alu -19 293 1 4364 200 90 12 chr2 225502481 225503518 -25184336 - L1MC4a LINE L1 -9 7799 6682 * 7211 71 8 6 chr2 225503511 225505084 -25182770 + L1PA8 LINE L1 4599 6173 0 1280 226 105 18 chr2 225505084 225505474 -25182380 - L1MC4 LINE L1 -1256 6786 6363 877 274 105 18 chr2 225505674 225506308 -25181546 - L1MEd LINE L1 -4592 1718 992 1305 203 0 0 chr2 225506329 225506541 -25181313 - AluJb SINE Alu -22 290 79 1760 208 81 99 chr2 225506826 225507581 -25180273 - HsTC2a DNA Tc2 -2 742 2 1280 139 150 30 chr2 225507999 225508266 -25179588 - AluSg SINE Alu -1 299 1 2067 130 7 13 chr2 225508305 225508605 -25179249 - AluSx SINE Alu -14 298 1 25 51 0 0 chr2 225508605 225508644 -25179210 + AT_rich Low_complexity Low_complexity 1 39 0 2193 121 0 7 chr2 225508709 225509015 -25178839 - AluSp SINE Alu -9 304 1 314 291 7 64 chr2 225509061 225509202 -25178652 - L1MC4 LINE L1 -370 7672 7540 2683 139 35 24 chr2 225509215 225509638 -25178216 + MSTA LTR MaLR 1 428 0 2782 82 14 8 chr2 225509690 225510054 -25177800 - L1PA8 LINE L1 -2 6170 5805 1859 145 0 7 chr2 225510252 225510535 -25177319 - AluJb SINE Alu -26 286 6 1483 176 47 47 chr2 225510645 225510941 -25176913 + AluJo SINE Alu 3 298 -14 250 71 167 0 chr2 225511171 225511213 -25176641 - MER46A DNA MER2_type 0 236 188 1044 96 0 7 chr2 225511213 225511349 -25176505 + AluSq/x SINE Alu 1 135 -177 2231 80 45 0 chr2 225511351 225511637 -25176217 + AluSq SINE Alu 1 299 -14 732 160 58 122 chr2 225511637 225511825 -25176029 - MER46A DNA MER2_type -60 176 1 827 177 14 14 chr2 225511934 225512075 -25175779 - BC200 scRNA scRNA -59 141 1 412 313 132 18 chr2 225512127 225512399 -25175455 - L1M4 LINE L1 -1913 4233 3931 239 317 96 12 chr2 225512431 225512598 -25175256 - L1M4 LINE L1 -2303 3843 3663 810 160 0 8 chr2 225512633 225512752 -25175102 - FLAM_C SINE Alu -20 123 6 2201 111 0 0 chr2 225512970 225513267 -25174587 - AluSx SINE Alu -15 297 1 1942 149 0 10 chr2 225513556 225513858 -25173996 + AluJb SINE Alu 1 299 -13 5238 77 21 12 chr2 225514047 225514590 -25173264 - L1PA13 LINE L1 -2 6161 5609 1579 98 13 13 chr2 225514590 225514814 -25173040 - AluSg/x SINE Alu -11 299 76 5238 77 21 12 chr2 225514814 225514945 -25172909 - L1PA13 LINE L1 -554 5609 5481 2634 36 3 0 chr2 225515143 225515449 -25172405 - AluY SINE Alu -4 307 1 1866 156 3 0 chr2 225516282 225516577 -25171277 + AluY SINE Alu 1 296 -15 3453 63 2 0 chr2 225516635 225517047 -25170807 - L1PA7 LINE L1 0 6154 5742 267 31 0 0 chr2 225517164 225517196 -25170658 + (A)n Simple_repeat Simple_repeat 1 32 0 964 138 0 0 chr2 225517944 225518074 -25169780 + FLAM_C SINE Alu 1 130 -3 2334 90 3 10 chr2 225518078 225518390 -25169464 + AluSg SINE Alu 1 310 0 2141 113 0 35 chr2 225518400 225518710 -25169144 + AluSx SINE Alu 1 299 -13 468 91 0 0 chr2 225518779 225518845 -25169009 + (TG)n Simple_repeat Simple_repeat 1 66 0 1965 130 3 20 chr2 225519076 225519377 -25168477 + AluSx SINE Alu 1 296 -16 2390 97 0 6 chr2 225519417 225519728 -25168126 + AluSp SINE Alu 1 309 -4 1057 175 103 0 chr2 225519731 225519925 -25167929 + AluJo SINE Alu 85 298 -14 1865 135 0 45 chr2 225519945 225520153 -25167701 + AluSx SINE Alu 1 192 -120 2196 82 29 23 chr2 225520153 225520459 -25167395 + AluSp SINE Alu 1 308 -5 1865 135 0 45 chr2 225520459 225520561 -25167293 + AluSx SINE Alu 192 297 -15 948 223 75 86 chr2 225520574 225520601 -25167253 - L1M4 LINE L1 -1432 4714 4688 1578 141 108 22 chr2 225520601 225520710 -25167144 + AluJo SINE Alu 1 99 -213 2258 102 3 19 chr2 225520710 225521024 -25166830 + AluSg1 SINE Alu 1 309 0 1578 141 108 22 chr2 225521024 225521191 -25166663 + AluJo SINE Alu 99 301 -11 948 223 75 86 chr2 225521191 225521528 -25166326 - L1M4 LINE L1 -1458 4688 4349 2328 98 0 0 chr2 225521528 225521825 -25166029 - AluSg SINE Alu -13 297 1 948 223 75 86 chr2 225521825 225521903 -25165951 - L1M4 LINE L1 -1797 4349 4272 2231 75 25 0 chr2 225521903 225522181 -25165673 - AluSg SINE Alu -25 285 1 948 223 75 86 chr2 225522181 225522282 -25165572 - L1M4 LINE L1 -1874 4272 4175 895 248 81 23 chr2 225522344 225522402 -25165452 - L1M4 LINE L1 -2163 3983 3930 2274 93 23 0 chr2 225522402 225522702 -25165152 - AluSx SINE Alu -5 307 1 895 248 81 23 chr2 225522702 225522780 -25165074 - L1M4 LINE L1 -2216 3930 3858 2117 119 11 0 chr2 225522780 225523065 -25164789 - AluSx SINE Alu -22 290 3 895 248 81 23 chr2 225523065 225523299 -25164555 - L1M4 LINE L1 -2288 3858 3595 2007 168 0 0 chr2 225523363 225523661 -25164193 - AluSx SINE Alu -14 298 1 2299 81 10 13 chr2 225523672 225523982 -25163872 - AluY SINE Alu -2 309 1 1014 175 92 34 chr2 225523997 225524088 -25163766 - AluJo SINE Alu -83 229 145 216 0 0 0 chr2 225524088 225524112 -25163742 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1014 175 92 34 chr2 225524112 225524125 -25163729 - AluJo SINE Alu -167 145 134 1760 124 18 22 chr2 225524125 225524398 -25163456 + AluSg1 SINE Alu 1 272 -37 1014 175 92 34 chr2 225524398 225524498 -25163356 - AluJo SINE Alu -178 134 12 1371 195 57 4 chr2 225524527 225524789 -25163065 - AluJo SINE Alu -35 277 2 1898 135 35 0 chr2 225524789 225525078 -25162776 - AluSx SINE Alu -13 299 1 270 176 0 0 chr2 225525371 225525422 -25162432 + (TA)n Simple_repeat Simple_repeat 2 52 0 470 212 89 50 chr2 225525495 225525674 -25162180 - L1ME3A LINE L1 -23 6147 5962 230 293 17 0 chr2 225527233 225527291 -25160563 + MIR SINE MIR 39 97 -111 320 316 86 33 chr2 225527324 225527476 -25160378 - MER5A DNA MER1_type -1 188 29 2460 46 7 16 chr2 225527509 225527813 -25160041 + AluY SINE Alu 1 301 -10 802 159 30 15 chr2 225528653 225528785 -25159069 + AluJo SINE Alu 2 135 -177 2361 99 0 3 chr2 225528877 225529190 -25158664 + AluSx SINE Alu 1 312 0 1930 151 3 13 chr2 225529374 225529679 -25158175 - AluSq SINE Alu -11 302 1 321 204 239 84 chr2 225529680 225529822 -25158032 + MIR3 SINE MIR 44 207 -1 2173 114 7 0 chr2 225530253 225530550 -25157304 - AluSx SINE Alu -13 299 1 2015 81 73 0 chr2 225530572 225530859 -25156995 - AluSc SINE Alu 0 306 1 2116 111 14 0 chr2 225531144 225531441 -25156413 + AluSx SINE Alu 1 301 -11 460 231 0 11 chr2 225531561 225531652 -25156202 + MIR3 SINE MIR 72 161 -47 2370 108 0 0 chr2 225531760 225532065 -25155789 + AluSq SINE Alu 1 305 -8 1712 176 10 10 chr2 225532215 225532517 -25155337 - AluJo SINE Alu -10 302 1 2305 98 0 22 chr2 225532653 225532970 -25154884 - AluSg SINE Alu 0 310 1 1099 61 0 15 chr2 225532970 225533102 -25154752 - AluY SINE Alu -181 130 1 2053 100 10 10 chr2 225533102 225533401 -25154453 - AluSx SINE Alu -13 299 1 2250 88 27 0 chr2 225533625 225533922 -25153932 + AluY SINE Alu 1 305 -6 230 313 157 12 chr2 225534202 225534285 -25153569 + MIR SINE MIR 20 114 -148 568 179 24 8 chr2 225534868 225534991 -25152863 + MIR SINE MIR 133 257 -5 760 279 42 25 chr2 225535010 225535107 -25152747 + MIR SINE MIR 19 113 -149 1694 166 17 21 chr2 225535107 225535397 -25152457 + AluJo SINE Alu 1 289 -23 321 26 0 0 chr2 225535397 225535435 -25152419 + (CATA)n Simple_repeat Simple_repeat 2 39 0 760 279 42 25 chr2 225535435 225535576 -25152278 + MIR SINE MIR 112 262 0 270 0 0 0 chr2 225535577 225535607 -25152247 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 531 0 0 0 chr2 225535606 225535665 -25152189 + (GA)n Simple_repeat Simple_repeat 2 60 0 203 289 6 58 chr2 225535863 225536019 -25151835 + CT-rich Low_complexity Low_complexity 2 149 0 2265 128 0 0 chr2 225536334 225536647 -25151207 + AluSq SINE Alu 1 313 0 582 160 0 22 chr2 225536730 225536941 -25150913 + AluJo SINE Alu 14 297 -15 2306 103 7 0 chr2 225537333 225537634 -25150220 + AluSq SINE Alu 1 303 -10 2482 84 3 0 chr2 225538740 225539049 -25148805 - AluSq SINE Alu -3 310 1 1536 161 88 22 chr2 225539132 225539405 -25148449 - AluJo SINE Alu -21 291 1 2413 82 0 25 chr2 225539883 225540200 -25147654 + AluSg SINE Alu 1 309 -1 1493 187 11 21 chr2 225541262 225541571 -25146283 + AluJo SINE Alu 1 306 0 1491 167 82 20 chr2 225541956 225542250 -25145604 + AluJb SINE Alu 1 312 0 207 295 262 0 chr2 225542575 225542697 -25145157 + MIR SINE MIR 61 214 -48 299 226 16 0 chr2 225542801 225542863 -25144991 - Charlie8 DNA MER1_type 0 2417 2355 849 276 26 13 chr2 225542870 225543098 -25144756 - Charlie8 DNA MER1_type -2186 231 1 181 222 14 97 chr2 225543192 225543264 -25144590 - L2 LINE L2 0 3313 3248 244 337 32 42 chr2 225543599 225543612 -25144242 + L2 LINE L2 2654 2666 -648 2245 90 24 0 chr2 225543612 225543902 -25143952 + AluSx SINE Alu 4 300 -12 244 337 32 42 chr2 225543902 225544078 -25143776 + L2 LINE L2 2666 2841 -473 2311 99 3 0 chr2 225545114 225545417 -25142437 + AluSp SINE Alu 1 304 -9 286 234 122 28 chr2 225545897 225546004 -25141850 - L2 LINE L2 -1 3271 3155 1953 125 3 56 chr2 225546005 225546325 -25141529 + AluSx SINE Alu 1 303 -9 191 270 0 54 chr2 225546348 225546422 -25141432 + L2 LINE L2 2425 2494 -820 589 269 98 55 chr2 225546490 225546717 -25141137 - MIR SINE MIR -8 254 14 26 0 0 27 chr2 225547133 225547154 -25140700 + AT_rich Low_complexity Low_complexity 1 22 -14 1791 182 0 3 chr2 225547154 225547456 -25140398 - AluJb SINE Alu -11 301 1 26 0 0 27 chr2 225547456 225547471 -25140383 + AT_rich Low_complexity Low_complexity 22 36 0 2171 118 3 3 chr2 225548000 225548289 -25139565 + AluSq SINE Alu 1 289 -24 419 319 100 69 chr2 225548387 225548809 -25139045 - L2 LINE L2 -222 3050 2618 418 225 116 51 chr2 225548827 225548965 -25138889 - MIR SINE MIR 0 262 116 * 587 301 182 37 chr2 225548951 225549386 -25138468 - L2 LINE L2 -685 2629 2132 463 259 75 74 chr2 225549448 225549771 -25138083 + L2 LINE L2 1932 2321 -993 189 74 0 0 chr2 225550576 225550603 -25137251 + (CACG)n Simple_repeat Simple_repeat 1 27 0 202 277 51 88 chr2 225551475 225551612 -25136242 - L2 LINE L2 0 3272 3141 * 223 308 77 0 chr2 225551594 225551672 -25136182 - MIR3 SINE MIR -18 190 107 378 328 104 30 chr2 225551737 225552005 -25135849 + L2 LINE L2 2686 2973 -341 395 312 172 19 chr2 225552048 225552362 -25135492 + L2 LINE L2 2952 3313 0 886 179 7 0 chr2 225553513 225553664 -25134190 + FAM SINE Alu 10 161 -24 1204 119 6 0 chr2 225553805 225553973 -25133881 - AluSp SINE Alu -12 301 133 1803 156 47 13 chr2 225554219 225554520 -25133334 - AluSx SINE Alu -1 311 1 266 262 85 0 chr2 225554810 225554906 -25132948 + MIR SINE MIR 25 131 -77 211 114 57 0 chr2 225554937 225554972 -25132882 + L2 LINE L2 3261 3297 -16 835 198 37 62 chr2 225554985 225555228 -25132626 + L1ME2 LINE L1 5928 6164 0 399 341 43 18 chr2 225555274 225555438 -25132416 - MIR3 SINE MIR -14 194 27 2137 86 12 64 chr2 225555636 225555963 -25131891 - AluY SINE Alu -1 310 1 1982 152 7 0 chr2 225556946 225557242 -25130612 + AluSx SINE Alu 1 298 -14 491 199 137 21 chr2 225557284 225557460 -25130394 + MIR SINE MIR 2 241 -21 309 280 109 51 chr2 225559473 225559754 -25128100 - L1MC4a LINE L1 -1779 6029 5729 2378 75 0 3 chr2 225559754 225560047 -25127807 - AluY SINE Alu -19 292 1 309 280 109 51 chr2 225560047 225560058 -25127796 - L1MC4a LINE L1 -2079 5729 5720 998 158 0 0 chr2 225560058 225560243 -25127611 - AluSg/x SINE Alu 0 319 135 2108 94 45 0 chr2 225560243 225560529 -25127325 - AluSx SINE Alu -13 299 1 346 254 92 21 chr2 225560531 225560673 -25127181 - L1MC4a LINE L1 -2081 5727 5576 489 263 18 70 chr2 225561127 225561298 -25126556 - MER5A DNA MER1_type -22 167 6 2211 125 0 10 chr2 225561415 225561728 -25126126 - AluSg SINE Alu 0 310 1 2045 148 3 0 chr2 225562058 225562356 -25125498 + AluJb SINE Alu 1 299 -13 2477 62 0 0 chr2 225562666 225562958 -25124896 + AluY SINE Alu 1 292 -19 315 0 0 0 chr2 225563451 225563486 -25124368 + (TG)n Simple_repeat Simple_repeat 2 36 0 288 0 0 0 chr2 225563485 225563517 -25124337 + (TC)n Simple_repeat Simple_repeat 1 32 0 * 187 310 35 0 chr2 225563632 225563690 -25124164 + L2 LINE L2 3198 3257 -15 522 235 25 8 chr2 225563693 225563812 -25124042 - MER117 DNA MER1_type -76 121 1 21 0 0 0 chr2 225564078 225564099 -25123755 + AT_rich Low_complexity Low_complexity 1 21 0 1147 183 4 77 chr2 225564454 225564689 -25123165 - MER20 DNA MER1_type -1 218 1 710 187 22 45 chr2 225565314 225565448 -25122406 - FLAM_A SINE Alu -3 139 9 1216 78 31 68 chr2 225565619 225565810 -25122044 + AluSg/x SINE Alu 112 295 -17 895 171 86 62 chr2 225565814 225565852 -25122002 + L1M4 LINE L1 4329 4365 -1781 1618 168 7 18 chr2 225565852 225566167 -25121687 - AluJo SINE Alu 0 312 1 895 171 86 62 chr2 225566167 225566431 -25121423 + L1M4 LINE L1 4365 4639 -1507 1082 187 50 61 chr2 225566432 225566710 -25121144 + MLT1A2 LTR MaLR 1 275 -99 1463 122 5 0 chr2 225566714 225566919 -25120935 - AluSg/x SINE Alu -12 300 95 237 33 0 0 chr2 225568035 225568065 -25119789 + (TG)n Simple_repeat Simple_repeat 2 31 0 2378 91 0 0 chr2 225569187 225569484 -25118370 + AluSg SINE Alu 1 297 -13 1889 132 3 43 chr2 225569588 225569913 -25117941 + AluJo SINE Alu 1 312 0 2237 132 0 0 chr2 225570109 225570420 -25117434 + AluSx SINE Alu 1 311 -1 549 209 126 53 chr2 225570705 225570911 -25116943 + L1ME LINE L1 5599 5819 -302 28 29 0 0 chr2 225571075 225571110 -25116744 + AT_rich Low_complexity Low_complexity 1 35 0 2378 72 30 7 chr2 225571187 225571491 -25116363 + AluY SINE Alu 1 311 0 432 105 35 23 chr2 225571615 225571701 -25116153 + AluJ/FRAM SINE Alu 221 307 -5 1919 158 0 10 chr2 225571711 225572003 -25115851 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr2 225572007 225572029 -25115825 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 765 229 0 0 chr2 225572208 225572339 -25115515 + FLAM_A SINE Alu 2 132 -1 2233 94 0 11 chr2 225572640 225572926 -25114928 - AluSq SINE Alu -30 283 1 1995 100 6 91 chr2 225573374 225573693 -25114161 + AluSq SINE Alu 5 296 -17 2466 89 0 0 chr2 225574082 225574385 -25113469 + AluSc SINE Alu 1 303 -6 667 203 52 145 chr2 225574589 225574647 -25113207 + HAL1 LINE L1 58 120 -2387 2338 97 7 0 chr2 225574647 225574955 -25112899 + AluSq SINE Alu 1 310 -3 667 203 52 145 chr2 225574955 225575145 -25112709 + HAL1 LINE L1 120 268 -2239 1797 125 0 73 chr2 225575145 225575298 -25112556 + AluSx SINE Alu 1 121 -191 2281 117 0 7 chr2 225575298 225575607 -25112247 + AluSq SINE Alu 3 309 -4 1797 125 0 73 chr2 225575607 225575766 -25112088 + AluSx SINE Alu 121 290 -22 667 203 52 145 chr2 225575766 225575861 -25111993 + HAL1 LINE L1 268 370 -2137 1818 107 12 12 chr2 225576326 225576579 -25111275 + AluSx SINE Alu 21 273 -39 360 0 0 0 chr2 225576597 225576637 -25111217 + (CA)n Simple_repeat Simple_repeat 2 41 0 2565 66 0 0 chr2 225576936 225577240 -25110614 - AluY SINE Alu -7 304 1 2274 103 0 19 chr2 225577250 225577561 -25110293 - AluSc SINE Alu -4 305 1 346 155 17 0 chr2 225577566 225577624 -25110230 + MER5B DNA MER1_type 120 178 0 1990 146 0 10 chr2 225577640 225577942 -25109912 - AluSx SINE Alu -13 299 1 1676 170 14 3 chr2 225578204 225578493 -25109361 + AluJo SINE Alu 1 292 -20 826 187 0 15 chr2 225578700 225578834 -25109020 + FLAM_C SINE Alu 2 133 0 1911 124 8 0 chr2 225579002 225579260 -25108594 - AluSx SINE Alu -52 260 1 351 216 27 0 chr2 225579283 225579357 -25108497 + MIR SINE MIR 187 262 0 1086 190 18 50 chr2 225579731 225579952 -25107902 - MER20 DNA MER1_type 0 219 6 1919 152 14 0 chr2 225580138 225580435 -25107419 - AluSx SINE Alu -11 301 1 1726 86 58 39 chr2 225580602 225580720 -25107134 - AluSq SINE Alu -51 262 148 387 0 0 0 chr2 225580720 225580763 -25107091 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 2356 73 0 0 chr2 225580763 225581051 -25106803 - AluSg SINE Alu -22 288 1 1726 86 58 39 chr2 225581051 225581188 -25106666 - AluSq SINE Alu -164 149 1 2305 98 0 7 chr2 225581287 225581593 -25106261 - AluSx SINE Alu -7 305 2 1979 114 3 59 chr2 225581603 225581927 -25105927 - AluSq SINE Alu -7 306 1 2191 123 3 0 chr2 225582095 225582397 -25105457 - AluSx SINE Alu -9 303 1 416 301 88 9 chr2 225582397 225582623 -25105231 - L1MC4 LINE L1 -204 7838 7595 448 330 56 22 chr2 225582659 225582838 -25105016 + L2 LINE L2 400 584 -2730 1642 138 28 8 chr2 225583419 225583672 -25104182 - Tigger3(Golem) DNA MER2_type 0 3038 2781 1233 107 6 6 chr2 225583994 225584171 -25103683 - AluSg/x SINE Alu -13 299 123 225 227 129 15 chr2 225584714 225584846 -25103008 - L1ME4a LINE L1 -1 6120 5974 1862 91 64 74 chr2 225584967 225585084 -25102770 + AluSx SINE Alu 1 118 -194 1892 133 25 7 chr2 225585084 225585391 -25102463 + AluSx SINE Alu 1 312 0 1862 91 64 74 chr2 225585391 225585570 -25102284 + AluSx SINE Alu 118 295 -17 1803 180 0 3 chr2 225585923 225586212 -25101642 + AluJb SINE Alu 1 288 -24 30 83 0 0 chr2 225589354 225589426 -25098428 + AT_rich Low_complexity Low_complexity 1 72 0 2237 112 3 0 chr2 225589496 225589791 -25098063 + AluSx SINE Alu 1 296 -16 1964 64 8 11 chr2 225589792 225590056 -25097798 + AluY SINE Alu 45 307 -4 415 277 85 7 chr2 225590209 225590407 -25097447 - MIR SINE MIR 0 262 11 318 309 171 0 chr2 225590584 225590707 -25097147 + MIR3 SINE MIR 65 208 0 369 326 30 15 chr2 225590971 225591106 -25096748 + MER5A DNA MER1_type 44 180 -9 1489 166 106 3 chr2 225591301 225591584 -25096270 - AluJo SINE Alu 0 312 1 270 260 13 52 chr2 225591994 225592071 -25095783 - L2 LINE L2 -10 3262 3189 354 125 36 0 chr2 225592866 225592922 -25094932 + MER66B LTR ERV1 289 346 -140 246 156 0 0 chr2 225593224 225593269 -25094585 + A-rich Low_complexity Low_complexity 1 45 0 1925 111 0 0 chr2 225593541 225593803 -25094051 + AluSx SINE Alu 35 296 -16 852 158 0 8 chr2 225593809 225593936 -25093918 - FLAM_C SINE Alu -17 126 1 2274 109 0 0 chr2 225593970 225594297 -25093557 + AluSx SINE Alu 1 312 0 913 138 0 0 chr2 225594961 225595084 -25092770 - AluJb SINE Alu -189 123 1 216 0 0 0 chr2 225595266 225595290 -25092564 + (A)n Simple_repeat Simple_repeat 1 24 0 1519 178 20 26 chr2 225596044 225596348 -25091506 - AluSx SINE Alu -10 302 1 2469 49 0 3 chr2 225596351 225596656 -25091198 - AluY SINE Alu -7 304 1 2144 93 0 3 chr2 225597059 225597350 -25090504 - AluSc SINE Alu -19 290 1 22 0 0 0 chr2 225597458 225597480 -25090374 + AT_rich Low_complexity Low_complexity 1 22 0 1746 142 33 7 chr2 225597535 225597837 -25090017 + AluSx SINE Alu 3 312 0 2252 79 3 0 chr2 225598274 225598566 -25089288 - AluSp SINE Alu -20 293 1 373 222 74 108 chr2 225598607 225598707 -25089147 - L1ME3A LINE L1 -13 6157 6064 2396 83 0 0 chr2 225598707 225599019 -25088835 + AluSx SINE Alu 1 312 0 373 222 74 108 chr2 225599019 225599094 -25088760 - L1ME3A LINE L1 -106 6064 5988 1561 216 56 25 chr2 225599205 225599385 -25088469 + L1M4 LINE L1 4450 4623 -1523 1443 167 44 81 chr2 225599385 225599666 -25088188 + MLT1A2 LTR MaLR 1 266 -108 2120 113 0 3 chr2 225599666 225599967 -25087887 - AluSx SINE Alu -12 300 1 1443 167 44 81 chr2 225599967 225600069 -25087785 + MLT1A2 LTR MaLR 266 370 -4 1561 216 56 25 chr2 225600069 225600319 -25087535 + L1M4 LINE L1 4623 4893 -1253 1889 106 47 0 chr2 225600320 225600595 -25087259 - AluSx SINE Alu -19 293 6 21 0 0 0 chr2 225601124 225601145 -25086709 + AT_rich Low_complexity Low_complexity 1 21 0 431 282 20 20 chr2 225601300 225601449 -25086405 - HAL1b LINE L1 -869 479 331 2096 130 0 0 chr2 225601466 225601767 -25086087 - AluSx SINE Alu -11 301 1 1706 119 105 28 chr2 225601767 225602053 -25085801 - AluSx SINE Alu -4 308 1 700 155 0 0 chr2 225602396 225602499 -25085355 - U6 snRNA snRNA -4 103 1 23 0 0 0 chr2 225602502 225602525 -25085329 + AT_rich Low_complexity Low_complexity 1 23 0 1332 203 31 3 chr2 225602525 225602811 -25085043 - AluJo SINE Alu -18 294 1 838 200 17 34 chr2 225602813 225602988 -25084866 - FAM SINE Alu -3 172 1 679 243 35 35 chr2 225603020 225603222 -25084632 + L1ME3 LINE L1 5845 6046 -116 1639 153 7 4 chr2 225603236 225603510 -25084344 - AluSx SINE Alu 0 312 38 287 179 75 85 chr2 225603527 225603633 -25084221 + L1ME3 LINE L1 6041 6145 -17 1160 215 26 67 chr2 225603633 225603945 -25083909 - MLT1D LTR MaLR 0 505 207 239 0 32 0 chr2 225603976 225604007 -25083847 + (TTG)n Simple_repeat Simple_repeat 2 33 0 836 176 13 19 chr2 225604009 225604168 -25083686 - FRAM SINE Alu -18 158 1 969 160 22 17 chr2 225604181 225604362 -25083492 - MLT1D LTR MaLR -323 182 1 22 35 0 0 chr2 225604448 225604477 -25083377 + AT_rich Low_complexity Low_complexity 1 29 0 2055 120 0 3 chr2 225604640 225604949 -25082905 + AluSg SINE Alu 1 308 -2 189 194 0 0 chr2 225605116 225605147 -25082707 + L2 LINE L2 3224 3254 -18 380 261 52 37 chr2 225605194 225605328 -25082526 + MIR SINE MIR 127 262 0 252 0 0 0 chr2 225608586 225608614 -25079240 + (T)n Simple_repeat Simple_repeat 1 28 0 212 0 36 0 chr2 225609729 225609757 -25078097 + (CA)n Simple_repeat Simple_repeat 2 30 0 799 251 107 18 chr2 225610367 225610404 -25077450 + L1M4 LINE L1 2558 2590 -3556 2014 122 0 7 chr2 225610404 225610708 -25077146 - AluSq SINE Alu -11 302 1 799 251 107 18 chr2 225610708 225611008 -25076846 + L1M4 LINE L1 2590 2925 -3221 403 233 11 59 chr2 225611049 225611282 -25076572 - AluSc SINE Alu -15 284 174 615 280 65 30 chr2 225611619 225611851 -25076003 + MIR SINE MIR 2 241 -21 744 144 32 16 chr2 225611870 225611995 -25075859 + FLAM_C SINE Alu 2 128 -15 320 248 119 73 chr2 225612918 225613114 -25074740 - L1M3 LINE L1 -489 5682 5466 1621 183 0 7 chr2 225613114 225613415 -25074439 + AluSx SINE Alu 2 300 -12 320 248 119 73 chr2 225613415 225613521 -25074333 - L1M3 LINE L1 -705 5466 5366 1821 132 3 40 chr2 225613549 225613715 -25074139 - AluSx SINE Alu -19 293 141 2173 88 3 3 chr2 225613715 225614011 -25073843 - AluSq SINE Alu -17 296 1 1821 132 3 40 chr2 225614011 225614148 -25073706 - AluSx SINE Alu -171 141 1 24 0 0 0 chr2 225614149 225614173 -25073681 + AT_rich Low_complexity Low_complexity 1 24 0 919 137 0 0 chr2 225615229 225615360 -25072494 + FLAM_C SINE Alu 1 131 -2 2289 86 0 10 chr2 225615364 225615677 -25072177 + AluSg SINE Alu 1 310 0 2130 120 0 22 chr2 225615687 225616004 -25071850 + AluSq SINE Alu 1 310 -3 2221 63 3 7 chr2 225616204 225616521 -25071333 + AluY SINE Alu 1 316 0 209 274 222 17 chr2 225616656 225616773 -25071081 - MIR3 SINE MIR -65 143 3 204 40 0 0 chr2 225617592 225617617 -25070237 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 222 37 0 0 chr2 225617663 225617690 -25070164 + (TA)n Simple_repeat Simple_repeat 2 28 0 2196 96 0 3 chr2 225617691 225617992 -25069862 - AluSg SINE Alu -10 300 1 522 197 0 55 chr2 225618072 225618199 -25069655 + AluJb SINE Alu 21 140 -172 534 107 0 0 chr2 225618200 225618275 -25069579 + U3 snRNA snRNA 1 75 -142 1743 158 3 7 chr2 225618280 225618578 -25069276 - AluJb SINE Alu -15 297 1 1455 138 32 28 chr2 225618616 225618899 -25068955 + AluSx SINE Alu 1 284 -28 31 0 0 0 chr2 225618933 225618964 -25068890 + AT_rich Low_complexity Low_complexity 1 31 0 1329 161 0 124 chr2 225618966 225619314 -25068540 + AluJo SINE Alu 1 305 -7 1799 149 3 10 chr2 225619331 225619627 -25068227 - AluSx SINE Alu -18 294 1 230 341 8 24 chr2 225619656 225619779 -25068075 - L2 LINE L2 -558 2756 2636 2351 83 0 3 chr2 225620193 225620505 -25067349 + AluY SINE Alu 1 311 0 719 78 0 0 chr2 225620861 225620964 -25066890 + L1MA1 LINE L1 6200 6302 0 22 0 0 0 chr2 225620964 225620986 -25066868 + AT_rich Low_complexity Low_complexity 1 22 0 204 331 89 41 chr2 225621402 225621571 -25066283 - L3b LINE CR1 -42 1541 1365 589 310 46 34 chr2 225622002 225622064 -25065790 - MIR SINE MIR 0 262 202 2336 87 3 3 chr2 225622064 225622375 -25065479 - AluSp SINE Alu -1 312 2 589 310 46 34 chr2 225622375 225622551 -25065303 - MIR SINE MIR -60 202 21 180 0 0 0 chr2 225622632 225622652 -25065202 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 473 314 0 0 chr2 225622656 225622777 -25065077 - L2 LINE L2 -9 3304 3184 2106 123 16 3 chr2 225622834 225623142 -25064712 + AluSx SINE Alu 1 312 0 2232 102 0 3 chr2 225623221 225623534 -25064320 + AluSx SINE Alu 1 312 0 426 279 29 0 chr2 225623849 225623953 -25063901 + MIR SINE MIR 38 144 -64 2016 116 0 0 chr2 225624041 225624356 -25063498 + AluSx SINE Alu 1 315 0 1536 173 37 17 chr2 225624372 225624667 -25063187 + AluJo SINE Alu 3 303 -9 563 284 189 9 chr2 225624801 225625023 -25062831 + MIR SINE MIR 1 262 0 279 56 0 0 chr2 225625257 225625293 -25062561 + MIR SINE MIR 110 145 -63 766 176 5 96 chr2 225625303 225625359 -25062495 - MER3 DNA MER1_type -4 205 146 2046 88 3 26 chr2 225625359 225625667 -25062187 + AluY SINE Alu 1 301 -10 766 176 5 96 chr2 225625667 225625798 -25062056 - MER3 DNA MER1_type -63 146 35 236 200 0 0 chr2 225625853 225625893 -25061961 - MER3 DNA MER1_type -169 40 1 2325 55 3 0 chr2 225625906 225626196 -25061658 - AluY SINE Alu -20 291 1 639 318 58 6 chr2 225626905 225627078 -25060776 + MIR SINE MIR 2 183 -79 1921 151 0 0 chr2 225627320 225627612 -25060242 + AluJb SINE Alu 3 294 -18 2142 111 3 3 chr2 225628279 225628585 -25059269 + AluSp SINE Alu 1 306 -7 2113 110 3 3 chr2 225629549 225629848 -25058006 - AluSq SINE Alu -14 299 1 2004 116 10 3 chr2 225629899 225630193 -25057661 + AluSg SINE Alu 1 296 -14 25 0 0 0 chr2 225631645 225631670 -25056184 + AT_rich Low_complexity Low_complexity 1 25 0 825 219 107 0 chr2 225633143 225633339 -25054515 + MIR SINE MIR 32 248 -14 1327 139 16 108 chr2 225633346 225633669 -25054185 + AluJo SINE Alu 1 293 -19 1847 131 28 0 chr2 225633731 225634021 -25053833 - AluSx SINE Alu -14 298 1 360 202 45 11 chr2 225634449 225634538 -25053316 + MIR SINE MIR 56 147 -115 522 220 0 18 chr2 225635777 225635886 -25051968 - MER94 DNA DNA -20 114 8 2137 117 3 0 chr2 225637351 225637658 -25050196 - AluSq SINE Alu -5 308 1 1161 169 41 0 chr2 225637930 225638149 -25049705 + AluJo SINE Alu 85 312 0 2408 63 0 22 chr2 225638161 225638477 -25049377 + AluY SINE Alu 1 309 -2 207 278 0 19 chr2 225638797 225638851 -25049003 + MER5B DNA MER1_type 17 69 -109 180 233 81 81 chr2 225638811 225638897 -25048957 - MER5B DNA MER1_type -30 148 63 * 224 143 0 0 chr2 225639186 225639221 -25048633 + MIR SINE MIR 228 262 0 1849 127 10 32 chr2 225639318 225639626 -25048228 - AluJo SINE Alu -11 301 1 2481 47 7 0 chr2 225639631 225639931 -25047923 - AluY SINE Alu -9 302 1 1468 187 18 7 chr2 225639935 225640213 -25047641 - AluJo SINE Alu -20 292 12 669 191 95 42 chr2 225640221 225640389 -25047465 - MIR SINE MIR -73 189 13 626 285 107 33 chr2 225643369 225643611 -25044243 - MIR SINE MIR -1 261 2 1702 166 34 0 chr2 225644020 225644315 -25043539 - AluSx SINE Alu -7 305 1 2081 96 0 20 chr2 225644842 225645145 -25042709 - AluSx SINE Alu -11 301 5 230 300 0 0 chr2 225645327 225645387 -25042467 - MIR SINE MIR -2 260 201 1721 71 0 0 chr2 225645404 225645615 -25042239 + AluY SINE Alu 1 211 -100 2307 102 10 0 chr2 225645953 225646248 -25041606 - AluSp SINE Alu -15 298 1 2275 89 7 3 chr2 225646253 225646545 -25041309 - AluSc SINE Alu -16 293 1 446 244 73 24 chr2 225646991 225647114 -25040740 - L2 LINE L2 -1 3312 3184 1976 163 16 0 chr2 225648262 225648568 -25039286 + AluJb SINE Alu 1 311 -1 302 176 0 0 chr2 225648989 225649040 -25038814 - MIR SINE MIR -107 155 105 465 239 210 6 chr2 225649907 225650083 -25037771 + MIR SINE MIR 1 212 -50 378 265 122 26 chr2 225652303 225652483 -25035371 - L1MC/D LINE L1 -476 5645 5484 2041 123 14 3 chr2 225652483 225652775 -25035079 - AluSq SINE Alu -18 295 1 378 265 122 26 chr2 225652775 225652894 -25034960 - L1MC/D LINE L1 -637 5484 5319 1950 166 0 28 chr2 225652914 225653234 -25034620 + AluJb SINE Alu 2 312 0 1071 171 0 6 chr2 225653588 225653764 -25034090 - FAM SINE Alu 0 175 1 276 254 39 29 chr2 225654823 225654928 -25032926 + MIR3 SINE MIR 68 174 -34 761 282 18 11 chr2 225654928 225655208 -25032646 - AluSx SINE Alu -12 300 19 1423 187 11 8 chr2 225655622 225655890 -25031964 - AluSx SINE Alu -43 269 1 202 313 48 79 chr2 225655954 225656210 -25031644 + L2 LINE L2 2804 3051 -221 2194 106 7 3 chr2 225656210 225656502 -25031352 - AluSx SINE Alu -19 293 1 202 313 48 79 chr2 225656502 225656536 -25031318 + L2 LINE L2 3051 3085 -187 2365 76 3 3 chr2 225657030 225657332 -25030522 + AluSq SINE Alu 1 302 -11 388 304 20 34 chr2 225657697 225657845 -25030009 + MIR SINE MIR 26 171 -91 1887 176 78 15 chr2 225708686 225709069 -24978785 + Charlie1 DNA MER1_type 1712 2120 -641 856 178 65 73 chr2 225709069 225709145 -24978709 + MER7A DNA MER2_type 1 76 -2962 2246 77 3 3 chr2 225709145 225709444 -24978410 + AluY SINE Alu 1 299 -12 856 178 65 73 chr2 225709444 225709614 -24978240 + MER7A DNA MER2_type 76 243 -103 1680 165 122 20 chr2 225709615 225710016 -24977838 + Charlie1 DNA MER1_type 2138 2579 -182 831 118 37 22 chr2 225710171 225710306 -24977548 + FLAM_C SINE Alu 1 137 -6 213 196 0 65 chr2 225710901 225710947 -24976907 + MIR SINE MIR 220 262 0 344 331 106 24 chr2 225710949 225711408 -24976446 + L2 LINE L2 2170 2756 -558 1522 149 4 15 chr2 225711495 225711757 -24976097 + AluJo SINE Alu 1 259 -53 1131 171 5 28 chr2 225711762 225711979 -24975875 - AluJo SINE Alu -100 212 1 541 187 30 8 chr2 225711980 225712114 -24975740 - Charlie2a DNA MER1_type -1954 908 772 264 235 31 31 chr2 225712208 225712306 -24975548 - Charlie2a DNA MER1_type -2517 345 248 971 188 9 56 chr2 225712406 225712517 -24975337 - Charlie1a DNA MER1_type -2558 203 105 1200 166 162 37 chr2 225712517 225712788 -24975066 - AluJb SINE Alu -7 305 1 971 188 9 56 chr2 225712788 225712889 -24974965 - Charlie1a DNA MER1_type -2656 105 1 2123 79 32 0 chr2 225713321 225713601 -24974253 - AluY SINE Alu -9 302 14 2295 94 3 0 chr2 225713894 225714203 -24973651 - AluSp SINE Alu -3 310 1 243 269 177 23 chr2 225715162 225715292 -24972562 - MER5A DNA MER1_type -24 165 16 3602 186 76 59 chr2 225715981 225716002 -24971852 + MER21B LTR ERV1 1 20 -843 1491 112 5 5 chr2 225716002 225716225 -24971629 + AluSg/x SINE Alu 83 305 -5 3602 186 76 59 chr2 225716225 225716761 -24971093 + MER21B LTR ERV1 20 545 -318 234 0 0 0 chr2 225716761 225716787 -24971067 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 580 185 74 0 chr2 225716787 225716895 -24970959 - FLAM_C SINE Alu -17 116 1 3602 186 76 59 chr2 225716895 225717149 -24970705 + MER21B LTR ERV1 544 828 -35 337 197 204 44 chr2 225717209 225717346 -24970508 - L2 LINE L2 0 3313 3155 791 152 0 30 chr2 225717367 225717499 -24970355 + FLAM_C SINE Alu 2 129 -4 1144 200 9 0 chr2 225717525 225717740 -24970114 + AluJo SINE Alu 1 217 -95 276 249 175 17 chr2 225717913 225718090 -24969764 - L2 LINE L2 -150 3163 2959 421 252 144 32 chr2 225718129 225718403 -24969451 - L2 LINE L2 -452 2862 2492 353 202 36 12 chr2 225719090 225719174 -24968680 - L1MC4 LINE L1 -554 7488 7403 * 1839 171 97 68 chr2 225719170 225719780 -24968074 + L1MC4 LINE L1 7377 8042 0 1534 122 4 8 chr2 225719948 225720194 -24967660 - L1MA4 LINE L1 -293 6007 5763 740 187 110 18 chr2 225720193 225720412 -24967442 - L1M1 LINE L1 -3983 2345 2107 * 1751 142 33 26 chr2 225720416 225720719 -24967135 - AluJo SINE Alu -3 309 5 1163 177 4 31 chr2 225720752 225720978 -24966876 - AluJo SINE Alu -19 293 74 5320 171 47 49 chr2 225720992 225721074 -24966780 - L1M1 LINE L1 -4065 1263 1182 2104 134 0 0 chr2 225721074 225721381 -24966473 - AluSx SINE Alu -5 307 1 5320 171 47 49 chr2 225721381 225721983 -24965871 - L1M1 LINE L1 -4146 1182 580 2031 126 0 10 chr2 225721983 225722292 -24965562 - AluSx SINE Alu -6 306 1 5320 171 47 49 chr2 225722292 225722326 -24965528 - L1M1 LINE L1 -4748 580 547 2026 124 3 16 chr2 225722326 225722632 -24965222 - AluSx SINE Alu -8 304 3 5320 171 47 49 chr2 225722632 225723019 -24964835 - L1M1 LINE L1 -4781 547 161 1868 84 4 36 chr2 225723019 225723293 -24964561 + AluY SINE Alu 38 302 -9 5320 171 47 49 chr2 225723293 225723613 -24964241 - L1M1 LINE L1 -5167 161 -158 3075 123 60 37 chr2 225723613 225724125 -24963729 - MER1A DNA MER1_type 0 527 4 5320 171 47 49 chr2 225724125 225724448 -24963406 - L1M1 LINE L1 -5486 4294967138 305 2118 106 0 29 chr2 225724448 225724760 -24963094 - AluSq SINE Alu -10 303 1 5320 171 47 49 chr2 225724760 225724821 -24963033 - L1M1 LINE L1 -5022 306 246 2305 81 0 3 chr2 225728489 225728787 -24959067 + AluSx SINE Alu 1 297 -15 2142 105 10 0 chr2 225729912 225730207 -24957647 + AluSx SINE Alu 1 298 -14 1142 119 6 0 chr2 225730375 225730543 -24957311 - AluSg/x SINE Alu -10 300 132 252 373 124 16 chr2 225730634 225730819 -24957035 + L3b LINE CR1 1292 1496 -87 319 232 137 21 chr2 225731916 225732011 -24955843 - MIR SINE MIR -71 137 32 458 276 83 26 chr2 225732288 225732444 -24955410 + MIR SINE MIR 71 235 -27 1631 133 53 0 chr2 225732983 225733247 -24954607 + AluJo SINE Alu 28 305 -7 2544 42 0 3 chr2 225733439 225733747 -24954107 + AluY SINE Alu 1 307 -4 212 333 143 19 chr2 225733766 225733871 -24953983 + MIR3 SINE MIR 6 123 -85 2009 109 7 3 chr2 225733916 225734223 -24953631 + AluJb SINE Alu 1 308 0 314 315 48 44 chr2 225734230 225734403 -24953451 - MIR SINE MIR -55 153 30 863 293 40 0 chr2 225736069 225736291 -24951563 + MIR SINE MIR 22 252 -10 688 307 38 5 chr2 225737119 225737331 -24950523 + MIR SINE MIR 2 220 -42 22 35 0 0 chr2 225737602 225737631 -24950223 + AT_rich Low_complexity Low_complexity 1 29 0 2012 117 7 0 chr2 225737634 225737925 -24949929 - AluSx SINE Alu -19 293 1 436 261 43 26 chr2 225737997 225738112 -24949742 - MIR SINE MIR 0 262 146 193 152 0 65 chr2 225738144 225738190 -24949664 + L2 LINE L2 3271 3313 0 2318 89 3 0 chr2 225738546 225738849 -24949005 - AluSp SINE Alu -9 304 1 1961 123 114 97 chr2 225739426 225739669 -24948185 - MSTA LTR MaLR 0 428 191 2258 88 0 7 chr2 225739669 225739975 -24947879 - AluY SINE Alu -7 304 1 2152 92 3 0 chr2 225739975 225740258 -24947596 - AluSp SINE Alu -29 284 1 1961 123 114 97 chr2 225740258 225740434 -24947420 - MSTA LTR MaLR -236 192 1 2260 98 0 3 chr2 225740810 225741116 -24946738 - AluY SINE Alu -6 305 1 785 164 8 30 chr2 225741141 225741275 -24946579 - FLAM_C SINE Alu -2 131 1 2072 125 3 0 chr2 225744155 225744452 -24943402 - AluSx SINE Alu -14 298 1 2199 157 39 107 chr2 225744490 225744561 -24943293 - L1MC4 LINE L1 -2 8040 7966 1330 187 100 55 chr2 225744561 225744940 -24942914 - MSTD LTR MaLR 0 396 1 2225 107 3 0 chr2 225744944 225745252 -24942602 - AluSq SINE Alu -4 309 1 2199 157 39 107 chr2 225745252 225745613 -24942241 - L1MC4 LINE L1 -79 7963 7579 234 0 0 0 chr2 225745613 225745639 -24942215 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1616 158 18 0 chr2 225745642 225745915 -24941939 - AluJb SINE Alu -34 278 1 2199 157 39 107 chr2 225745915 225746109 -24941745 - L1MC4 LINE L1 -465 7577 7447 852 202 6 49 chr2 225746127 225746300 -24941554 - AluJo SINE Alu -11 301 135 2179 107 0 0 chr2 225746300 225746598 -24941256 - AluSg SINE Alu -12 298 1 3325 19 3 0 chr2 225746610 225746987 -24940867 - L1PA3 LINE L1 0 6155 5778 860 163 0 15 chr2 225746989 225747124 -24940730 - AluJo SINE Alu -169 133 1 2300 78 3 13 chr2 225747132 225747440 -24940414 - AluSp SINE Alu -8 305 1 2147 99 7 3 chr2 225747440 225747744 -24940110 - AluSx SINE Alu -6 306 2 293 283 62 28 chr2 225747754 225747899 -24939955 - L1ME LINE L1 -302 5819 5670 232 286 39 0 chr2 225748390 225748467 -24939387 - MER113 DNA MER1_type? -200 321 242 1035 145 78 39 chr2 225748467 225748722 -24939132 - MER58 DNA MER1_type -1 2419 2155 328 297 34 7 chr2 225748818 225748966 -24938888 - L1MB7 LINE L1 -15 6169 6018 2134 92 0 14 chr2 225748971 225749264 -24938590 - AluSg1 SINE Alu -20 289 1 180 0 0 0 chr2 225749272 225749292 -24938562 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1672 158 0 37 chr2 225749296 225749594 -24938260 - AluJb SINE Alu -25 287 1 3016 167 35 15 chr2 225749608 225750565 -24937289 - L1MB7 LINE L1 -350 5834 4865 634 300 43 16 chr2 225750612 225750845 -24937009 + MIR SINE MIR 1 236 -26 413 242 40 73 chr2 225750860 225750901 -24936953 - MER58 DNA MER1_type -218 123 82 2155 113 0 19 chr2 225750901 225751219 -24936635 + AluSq SINE Alu 1 312 -1 413 242 40 73 chr2 225751219 225751301 -24936553 - MER58 DNA MER1_type -259 82 4 713 217 31 112 chr2 225752039 225752297 -24935557 - MER102b DNA MER1_type -6 335 99 218 323 65 0 chr2 225752372 225752465 -24935389 - MIR SINE MIR -132 130 32 186 43 0 0 chr2 225753256 225753279 -24934575 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 387 375 10 20 chr2 225753875 225754075 -24933779 - L2 LINE L2 -188 3084 2887 206 296 93 37 chr2 225754514 225754573 -24933281 - MER5A DNA MER1_type -72 117 63 1714 173 6 16 chr2 225754573 225754886 -24932968 - AluJb SINE Alu -2 310 1 206 296 93 37 chr2 225754886 225754934 -24932920 - MER5A DNA MER1_type -126 63 4 297 206 14 55 chr2 225755385 225755458 -24932396 + L2 LINE L2 3244 3313 0 210 286 0 0 chr2 225756420 225756483 -24931371 + GA-rich Low_complexity Low_complexity 2 64 0 2345 72 10 7 chr2 225758249 225758554 -24929300 - AluSp SINE Alu -7 306 1 2303 97 0 13 chr2 225758554 225758864 -24928990 - AluSx SINE Alu -6 306 1 2156 89 3 0 chr2 225758886 225759178 -24928676 - AluSg SINE Alu -7 303 11 736 230 160 5 chr2 225762714 225762927 -24924927 - MIR SINE MIR -14 248 3 2028 106 14 0 chr2 225762943 225763236 -24924618 - AluSp SINE Alu -5 308 12 975 163 18 0 chr2 225763238 225763404 -24924450 - AluSq SINE Alu -19 294 126 1951 101 3 37 chr2 225763404 225763735 -24924119 - AluY SINE Alu 0 311 1 279 79 0 0 chr2 225764835 225764873 -24922981 + (TG)n Simple_repeat Simple_repeat 2 39 0 237 273 96 48 chr2 225765327 225765452 -24922402 + MIR SINE MIR 75 210 -52 2181 254 75 30 chr2 225765572 225766489 -24921365 - L2 LINE L2 -4 3309 2328 1654 119 97 0 chr2 225766572 225766841 -24921013 - AluJb SINE Alu -17 295 1 2241 80 0 7 chr2 225767172 225767485 -24920369 - AluSx SINE Alu 0 311 1 300 328 38 15 chr2 225767532 225767663 -24920191 - L1MC5 LINE L1 -497 7464 7331 2115 73 0 4 chr2 225767978 225768251 -24919603 + AluSc SINE Alu 28 299 -10 276 235 24 24 chr2 225768568 225768653 -24919201 - L1MC5 LINE L1 -44 7917 7833 2037 128 7 0 chr2 225768717 225769013 -24918841 + AluSx SINE Alu 1 298 -14 1906 150 7 0 chr2 225769013 225769306 -24918548 + AluSx SINE Alu 1 295 -17 361 196 113 10 chr2 225769308 225769405 -24918449 - LTR48 LTR ERV1 -72 715 609 * 521 214 193 48 chr2 225769394 225769674 -24918180 - LTR48 LTR ERV1 -161 481 213 405 230 66 0 chr2 225769697 225769788 -24918066 - MER34 LTR ERV1 -452 95 1 845 158 70 19 chr2 225769914 225770072 -24917782 - FRAM SINE Alu 0 166 1 2522 158 47 0 chr2 225770126 225770550 -24917304 - MER72 LTR ERV1 0 722 279 1374 172 4 0 chr2 225770584 225770816 -24917038 + AluJo SINE Alu 80 312 0 471 236 36 27 chr2 225770899 225771009 -24916845 - MER72 LTR ERV1 -525 197 87 2117 64 0 0 chr2 225771135 225771399 -24916455 - AluY SINE Alu -47 264 1 475 149 53 32 chr2 225771399 225771493 -24916361 - MER72 LTR ERV1 -626 96 1 566 239 58 67 chr2 225771509 225771566 -24916288 - L1MC5 LINE L1 -379 7582 7526 1757 136 52 7 chr2 225771566 225771852 -24916002 - AluSx SINE Alu -13 299 1 566 239 58 67 chr2 225771852 225772124 -24915730 - L1MC5 LINE L1 -435 7526 7256 1526 141 31 17 chr2 225772705 225772995 -24914859 + AluJo SINE Alu 1 294 -18 233 265 204 20 chr2 225773953 225774051 -24913803 - L2 LINE L2 -7 3265 3150 368 202 131 0 chr2 225774656 225774755 -24913099 + Charlie2 DNA MER1_type 1 112 -2670 2107 97 7 7 chr2 225774763 225775061 -24912793 - AluSx SINE Alu -14 298 1 895 122 34 7 chr2 225775120 225775268 -24912586 + AluSg/x SINE Alu 141 292 -18 207 0 0 0 chr2 225775269 225775292 -24912562 + (TA)n Simple_repeat Simple_repeat 1 23 0 680 322 13 32 chr2 225775295 225775699 -24912155 + HUERS-P3 LTR ERV1 3359 3763 -3993 1815 80 12 4 chr2 225775838 225776089 -24911765 - AluSg SINE Alu -57 253 1 1048 149 21 55 chr2 225776089 225776504 -24911350 + L1MDa LINE L1 1834 2462 -4078 2660 194 59 74 chr2 225776998 225777343 -24910511 + L1MDa LINE L1 2418 2767 -3773 2274 77 0 3 chr2 225777343 225777642 -24910212 + AluSq SINE Alu 1 298 -15 2660 194 59 74 chr2 225777642 225778337 -24909517 + L1MDa LINE L1 2767 3433 -3107 2360 72 19 0 chr2 225778344 225778651 -24909203 + AluSp SINE Alu 1 313 0 357 214 24 0 chr2 225778693 225778777 -24909077 + L1MC4a LINE L1 5846 5931 -1877 1565 115 0 22 chr2 225778788 225779014 -24908840 + AluSg SINE Alu 4 224 -86 360 0 0 0 chr2 225779042 225779082 -24908772 + (A)n Simple_repeat Simple_repeat 1 40 0 1943 142 12 46 chr2 225779082 225779406 -24908448 + MER41E LTR ERV1 200 512 0 348 135 19 0 chr2 225779693 225779745 -24908109 - AluSq SINE Alu -45 258 206 2832 110 162 8 chr2 225779790 225780264 -24907590 + LTR10A LTR ERV1 1 547 -62 1488 124 0 0 chr2 225780278 225780487 -24907367 - AluSq SINE Alu -104 209 1 938 105 0 56 chr2 225780488 225780631 -24907223 - AluSq/x SINE Alu -177 135 1 607 193 76 58 chr2 225780761 225780932 -24906922 - Charlie8 DNA MER1_type -2186 231 58 273 270 204 16 chr2 225781033 225781196 -24906658 - MIR SINE MIR -62 200 16 2010 117 0 7 chr2 225781325 225781657 -24906197 + AluSx SINE Alu 1 312 0 1808 258 55 77 chr2 225781912 225782041 -24905813 + MER21B LTR ERV1 13 143 -720 2018 131 3 0 chr2 225782041 225782331 -24905523 + AluSg SINE Alu 1 291 -19 1808 258 55 77 chr2 225782331 225782914 -24904940 + MER21B LTR ERV1 143 709 -154 420 150 0 0 chr2 225783108 225783188 -24904666 + (TC)n Simple_repeat Simple_repeat 1 80 0 242 216 0 20 chr2 225783420 225783471 -24904383 + GA-rich Low_complexity Low_complexity 3 52 0 446 284 30 0 chr2 225783475 225783609 -24904245 - MIR SINE MIR -6 256 119 1876 142 30 3 chr2 225783609 225783911 -24903943 + AluSg SINE Alu 1 310 0 560 134 16 31 chr2 225783911 225784038 -24903816 + GA-rich Low_complexity Low_complexity 4 128 0 38712 78 16 9 chr2 225784051 225785463 -24902391 + L1PA6 LINE L1 13 1413 -4741 2478 74 0 0 chr2 225785463 225785773 -24902081 + AluY SINE Alu 1 310 -1 38712 78 16 9 chr2 225785773 225786301 -24901553 + L1PA6 LINE L1 1413 1936 -4218 2293 74 7 3 chr2 225786301 225786598 -24901256 + AluY SINE Alu 1 298 -13 38712 78 16 9 chr2 225786598 225790761 -24897093 + L1PA6 LINE L1 1936 6154 0 1986 117 31 0 chr2 225790829 225791120 -24896734 + AluSx SINE Alu 1 300 -12 220 210 48 16 chr2 225791136 225791198 -24896656 - MIR SINE MIR -157 105 42 2107 101 13 7 chr2 225791367 225791665 -24896189 - AluSp SINE Alu -13 300 1 1092 160 19 5 chr2 225791820 225792026 -24895828 + AluJb SINE Alu 91 299 -13 2163 103 10 0 chr2 225792060 225792361 -24895493 + AluSx SINE Alu 1 304 -8 2134 113 3 0 chr2 225792365 225792666 -24895188 + AluSg SINE Alu 1 302 -8 669 160 118 0 chr2 225792668 225792829 -24895025 + FLAM_C SINE Alu 1 175 0 261 260 132 54 chr2 225792985 225793033 -24894821 + L1ME3A LINE L1 5703 5746 -424 1606 147 62 0 chr2 225793033 225793305 -24894549 + AluSx SINE Alu 2 290 -22 261 260 132 54 chr2 225793305 225793460 -24894394 + L1ME3A LINE L1 5746 5922 -248 855 107 25 0 chr2 225793568 225793689 -24894165 - L1M3f LINE L1 -5204 124 1 1132 190 20 92 chr2 225793689 225793927 -24893927 - L1 LINE L1 -1724 4422 4168 1360 204 48 4 chr2 225793927 225794196 -24893658 - AluJb SINE Alu -31 281 1 1132 190 20 92 chr2 225794196 225794338 -24893516 - L1 LINE L1 -1978 4168 4017 1920 96 0 125 chr2 225794338 225794699 -24893155 + AluSg SINE Alu 1 300 0 1132 190 20 92 chr2 225794699 225794774 -24893080 - L1 LINE L1 -2129 4017 3338 837 212 31 21 chr2 225794774 225794967 -24892887 - L1MC4a LINE L1 -939 6869 3989 1555 185 3 26 chr2 225794975 225795278 -24892576 + AluJo SINE Alu 2 297 -15 2229 104 0 0 chr2 225795280 225795577 -24892277 + AluSx SINE Alu 1 297 -15 2146 84 205 8 chr2 225797363 225797719 -24890135 - MSTA LTR MaLR 0 428 3 531 313 111 5 chr2 225798233 225798441 -24889413 + MIR SINE MIR 15 244 -18 244 287 279 33 chr2 225798487 225798759 -24889095 - L2 LINE L2 -1 3271 2933 1455 178 16 43 chr2 225799431 225799735 -24888119 + AluJo SINE Alu 1 296 -16 2107 90 10 0 chr2 225799829 225800119 -24887735 - AluSg SINE Alu -17 293 1 1898 160 0 0 chr2 225800120 225800427 -24887427 - AluJb SINE Alu -5 307 1 1373 153 142 0 chr2 225801002 225801263 -24886591 - AluJb SINE Alu -12 300 3 1135 216 23 0 chr2 225803452 225803670 -24884184 + MER58A DNA MER1_type 1 223 -1 2000 141 3 0 chr2 225804944 225805250 -24882604 + AluSx SINE Alu 1 307 -5 1037 163 0 6 chr2 225805260 225805426 -24882428 + AluSx SINE Alu 1 165 -147 321 160 0 0 chr2 225805427 225805477 -24882377 - Alu SINE Alu -250 50 1 1435 168 20 49 chr2 225806118 225806422 -24881432 - AluJo SINE Alu -17 295 1 357 230 286 0 chr2 225806634 225806760 -24881094 - MIR3 SINE MIR -7 201 40 3527 134 58 43 chr2 225806810 225806994 -24880860 - L1MD1 LINE L1 0 6242 6062 1983 107 0 66 chr2 225806994 225807311 -24880543 + AluSq SINE Alu 2 297 -16 3527 134 58 43 chr2 225807311 225807819 -24880035 - L1MD1 LINE L1 -180 6062 5540 2273 99 3 0 chr2 225807819 225808131 -24879723 - AluSp SINE Alu 0 313 1 21 57 0 0 chr2 225808392 225808427 -24879427 + AT_rich Low_complexity Low_complexity 1 35 0 2128 121 3 0 chr2 225812524 225812830 -24875024 + AluSq SINE Alu 1 307 -6 2239 98 3 0 chr2 225813613 225813918 -24873936 - AluY SINE Alu -5 306 1 849 214 0 40 chr2 225814532 225814705 -24873149 + FAM SINE Alu 5 170 -5 204 367 0 0 chr2 225814803 225814863 -24872991 - L3 LINE CR1 -7 1570 1511 444 336 27 2 chr2 225815128 225815294 -24872560 - MIR SINE MIR -68 140 16 25 0 0 0 chr2 225815387 225815412 -24872442 + AT_rich Low_complexity Low_complexity 1 25 0 347 194 28 0 chr2 225815467 225815539 -24872315 - MIR SINE MIR -129 133 60 2332 89 3 3 chr2 225816045 225816358 -24871496 - AluSp SINE Alu 0 313 1 518 233 134 23 chr2 225821105 225821277 -24866577 + MIR SINE MIR 28 218 -44 822 238 226 9 chr2 225822759 225823108 -24864746 + L1ME1 LINE L1 5399 5823 -536 2096 91 3 7 chr2 225823112 225823410 -24864444 + AluSp SINE Alu 1 297 -16 913 121 0 7 chr2 225823421 225823562 -24864292 + FLAM_C SINE Alu 4 143 0 1057 210 153 5 chr2 225823562 225823871 -24863983 + L1ME1 LINE L1 5815 6162 0 2151 212 99 37 chr2 225823892 225824132 -24863722 + L1ME2 LINE L1 5408 5632 -532 2352 72 7 0 chr2 225824132 225824437 -24863417 + AluY SINE Alu 1 307 -4 2151 212 99 37 chr2 225824437 225824849 -24863005 + L1ME2 LINE L1 5632 6108 -56 1985 128 92 6 chr2 225824849 225825176 -24862678 - MLT1C LTR MaLR -93 374 20 2071 100 10 13 chr2 225825251 225825550 -24862304 + AluSq SINE Alu 1 298 -15 1531 171 39 0 chr2 225825953 225826234 -24861620 + AluJo SINE Alu 1 292 -20 180 0 0 0 chr2 225826277 225826297 -24861557 + (CCCTAA)n Simple_repeat Simple_repeat 2 21 0 180 182 0 0 chr2 225826297 225826330 -24861524 - L2 LINE L2 -13 3300 3268 2830 201 15 15 chr2 225826349 225826997 -24860857 - L1M4 LINE L1 -1213 5431 4784 524 278 94 33 chr2 225827189 225827434 -24860420 - L1M4 LINE L1 -6275 267 8 1376 201 135 65 chr2 225827451 225827524 -24860330 - L1ME3A LINE L1 -5 6165 6099 373 88 29 44 chr2 225827524 225827592 -24860262 - L1PA13 LINE L1 -18 6145 6079 1376 201 135 65 chr2 225827592 225827726 -24860128 - L1ME3A LINE L1 -71 6099 5976 1381 170 75 59 chr2 225827726 225828084 -24859770 - MLT1A1 LTR MaLR -1 364 1 1376 201 135 65 chr2 225828084 225828273 -24859581 - L1ME3A LINE L1 -194 5976 5727 1645 145 62 0 chr2 225828273 225828549 -24859305 - AluSx SINE Alu -18 294 2 1376 201 135 65 chr2 225828549 225828623 -24859231 - L1ME3A LINE L1 -443 5727 5660 668 160 118 0 chr2 225828753 225828913 -24858941 - FLAM_C SINE Alu 0 174 1 2134 113 3 0 chr2 225828915 225829216 -24858638 - AluSg SINE Alu -8 302 1 2163 103 10 0 chr2 225829220 225829521 -24858333 - AluSx SINE Alu -8 304 1 1239 140 14 5 chr2 225829555 225829762 -24858092 - AluJb SINE Alu -13 299 91 2193 95 14 0 chr2 225829917 225830213 -24857641 + AluSp SINE Alu 1 300 -13 220 210 48 16 chr2 225830382 225830444 -24857410 + MIR SINE MIR 42 105 -157 1986 117 31 0 chr2 225830460 225830751 -24857103 - AluSx SINE Alu -12 300 1 38762 78 16 9 chr2 225830819 225834982 -24852872 - L1PA6 LINE L1 0 6154 2022 2293 74 7 3 chr2 225834982 225835279 -24852575 - AluY SINE Alu -13 298 1 38762 78 16 9 chr2 225835279 225835807 -24852047 - L1PA6 LINE L1 -4132 2022 1499 2478 74 0 0 chr2 225835807 225836117 -24851737 - AluY SINE Alu -1 310 1 38762 78 16 9 chr2 225836117 225837529 -24850325 - L1PA6 LINE L1 -4655 1499 13 596 130 15 30 chr2 225837542 225837673 -24850181 + CT-rich Low_complexity Low_complexity 4 132 0 1876 142 30 3 chr2 225837673 225837975 -24849879 - AluSg SINE Alu 0 310 1 446 284 30 0 chr2 225837975 225838109 -24849745 + MIR SINE MIR 119 256 -6 242 216 0 20 chr2 225838113 225838164 -24849690 + CT-rich Low_complexity Low_complexity 3 52 0 420 150 0 0 chr2 225838396 225838476 -24849378 + (GA)n Simple_repeat Simple_repeat 1 80 0 1808 258 55 77 chr2 225838670 225839253 -24848601 - MER21B LTR ERV1 -154 709 143 2018 131 3 0 chr2 225839253 225839543 -24848311 - AluSg SINE Alu -19 291 1 1808 258 55 77 chr2 225839543 225839672 -24848182 - MER21B LTR ERV1 -720 143 13 2025 113 0 7 chr2 225839927 225840259 -24847595 - AluSx SINE Alu 0 312 1 273 270 204 16 chr2 225840388 225840551 -24847303 + MIR SINE MIR 16 200 -62 607 193 76 58 chr2 225840652 225840823 -24847031 + Charlie8 DNA MER1_type 47 220 -2197 938 105 0 56 chr2 225840953 225841096 -24846758 + AluSq/x SINE Alu 1 135 -178 1488 124 0 0 chr2 225841097 225841306 -24846548 + AluSq SINE Alu 1 209 -104 2832 110 162 8 chr2 225841320 225841794 -24846060 - LTR10A LTR ERV1 -62 547 1 348 135 19 0 chr2 225841839 225841891 -24845963 + AluSq SINE Alu 206 258 -45 3044 128 22 69 chr2 225842183 225842508 -24845346 - MER41E LTR ERV1 -4 508 216 1716 119 101 18 chr2 225842508 225842794 -24845060 - AluSg SINE Alu 0 310 1 3044 128 22 69 chr2 225842794 225843001 -24844853 - MER41E LTR ERV1 -296 216 1 1180 261 54 54 chr2 225843092 225843518 -24844336 - MER41E-int LTR ERV1 -5 6671 6243 2380 54 3 0 chr2 225843518 225843815 -24844039 - AluY SINE Alu -13 298 1 1180 261 54 54 chr2 225843815 225843925 -24843929 - MER41E-int LTR ERV1 -432 6244 6135 680 334 20 28 chr2 225844085 225844596 -24843258 - HUERS-P3 LTR ERV1 -3879 3927 3359 207 0 0 0 chr2 225844599 225844622 -24843232 + (TA)n Simple_repeat Simple_repeat 2 24 0 998 101 34 7 chr2 225844623 225844771 -24843083 - AluSg/x SINE Alu -18 292 141 1952 119 4 0 chr2 225844830 225845107 -24842747 + AluSx SINE Alu 1 278 -34 285 248 83 45 chr2 225845154 225845367 -24842487 + L1MEd LINE L1 1248 1510 -4862 677 205 30 12 chr2 225845405 225845571 -24842283 + LTR37B LTR ERV1 298 466 -2 238 238 199 46 chr2 225845571 225845722 -24842132 + MER112 DNA MER1_type 81 254 -6 2317 105 0 0 chr2 225847114 225847427 -24840427 + AluSq SINE Alu 1 313 0 381 289 117 16 chr2 225847646 225847774 -24840080 - L2 LINE L2 -10 3303 3163 3427 112 89 7 chr2 225848380 225848967 -24838887 + LTR24C LTR ERV1 1 635 0 3798 106 19 2 chr2 225849035 225849553 -24838301 - MER1A DNA MER1_type 0 527 1 295 226 36 149 chr2 225850016 225850140 -24837714 - MLT1K LTR MaLR -43 545 443 695 185 0 39 chr2 225850140 225850270 -24837584 + FLAM_A SINE Alu 1 125 -8 295 226 36 149 chr2 225850270 225850313 -24837541 - MLT1K LTR MaLR -145 443 397 318 319 22 22 chr2 225850327 225850462 -24837392 - MLT1K LTR MaLR -346 242 108 1775 176 13 0 chr2 225850921 225851227 -24836627 - AluJb SINE Alu -2 310 1 216 286 66 11 chr2 225851273 225851364 -24836490 + L2 LINE L2 3149 3244 -28 976 243 67 15 chr2 225851659 225852002 -24835852 + MSTD LTR MaLR 1 396 0 1502 258 40 75 chr2 225852052 225852649 -24835205 - MLT1G LTR MaLR 0 590 15 563 218 69 11 chr2 225853224 225853405 -24834449 + L1MC4a LINE L1 5641 5819 -302 2547 128 10 20 chr2 225853442 225853849 -24834005 - MER57A LTR ERV1 0 403 1 987 116 27 0 chr2 225853849 225853995 -24833859 - MER57A-int LTR ERV1 0 7537 7388 245 163 41 0 chr2 225853995 225854044 -24833810 - LTR54B LTR ERV1 -214 284 234 389 130 0 0 chr2 225854046 225854100 -24833754 - MER57A-int LTR ERV1 -204 7333 7280 719 110 31 31 chr2 225854101 225854228 -24833626 - LTR54B LTR ERV1 -367 131 5 4264 89 37 5 chr2 225854230 225854826 -24833028 - MER57A-int LTR ERV1 -392 7145 6531 2324 71 0 13 chr2 225854828 225855137 -24832717 - AluY SINE Alu -6 305 1 964 118 0 0 chr2 225855137 225855272 -24832582 - AluSq/x SINE Alu -178 135 1 13520 121 34 28 chr2 225855272 225856201 -24831653 - MER57A-int LTR ERV1 -999 6538 5616 189 0 0 0 chr2 225856201 225856222 -24831632 + (CA)n Simple_repeat Simple_repeat 2 22 0 13520 121 34 28 chr2 225856222 225857203 -24830651 - MER57A-int LTR ERV1 -1921 5616 4611 2174 123 0 0 chr2 225857203 225857512 -24830342 - AluSx SINE Alu -3 309 1 13520 121 34 28 chr2 225857512 225857827 -24830027 - MER57A-int LTR ERV1 -2926 4611 4299 1334 137 9 5 chr2 225857844 225858063 -24829791 - AluSg/x SINE Alu -5 307 88 1372 198 112 16 chr2 225858063 225858376 -24829478 - MER61A LTR ERV1 0 343 1 22843 75 27 16 chr2 225858376 225860448 -24827406 - MER61A-int LTR ERV1 0 5217 3170 2175 95 0 3 chr2 225860448 225860757 -24827097 + AluSx SINE Alu 2 309 0 22843 75 27 16 chr2 225860757 225861240 -24826614 - MER61A-int LTR ERV1 -2047 3170 2694 2012 112 3 17 chr2 225861240 225861536 -24826318 - AluSq SINE Alu -21 292 1 22843 75 27 16 chr2 225861536 225862148 -24825706 - MER61A-int LTR ERV1 -2523 2694 1961 2117 113 0 7 chr2 225862148 225862441 -24825413 - AluSx SINE Alu -21 291 1 22843 75 27 16 chr2 225862441 225862736 -24825118 - MER61A-int LTR ERV1 -3256 1961 1671 1950 137 0 0 chr2 225862737 225863050 -24824804 + AluSx SINE Alu 1 313 0 1046 234 10 5 chr2 225863055 225863264 -24824590 + MLT2D LTR ERVL 113 322 -92 3065 71 35 79 chr2 225863264 225863772 -24824082 + LTR21A LTR ERV1 1 486 -19 478 164 0 67 chr2 225863772 225863876 -24823978 + MLT2D LTR ERVL 318 414 0 1222 231 75 19 chr2 225864145 225864453 -24823401 - REP3 LTR ERV -181 381 57 186 43 0 0 chr2 225864562 225864585 -24823269 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 282 247 32 0 chr2 225864728 225864821 -24823033 - L1ME4a LINE L1 -12 6109 6014 203 333 17 0 chr2 225864822 225864882 -24822972 + L2 LINE L2 3212 3272 0 533 261 129 34 chr2 225864925 225865305 -24822549 - L1ME4a LINE L1 -148 5973 5558 1392 129 0 18 chr2 225865356 225865573 -24822281 + AluSx SINE Alu 1 213 -99 450 202 9 28 chr2 225865674 225865783 -24822071 + AluSx SINE Alu 190 296 -14 4132 127 5 2 chr2 225865804 225866442 -24821412 + L1PA13 LINE L1 5524 6163 0 1825 140 0 49 chr2 225866444 225866772 -24821082 + AluJb SINE Alu 1 312 0 382 299 69 61 chr2 225866789 225867020 -24820834 + L1MC4a LINE L1 5943 6175 -1633 414 0 0 0 chr2 225867469 225867515 -24820339 + (TCTCCC)n Simple_repeat Simple_repeat 1 46 0 5119 79 33 54 chr2 225867515 225868465 -24819389 + SVA Other Other 57 868 -611 448 283 7 0 chr2 225868573 225868711 -24819143 + AluSg/x SINE Alu 150 288 -22 228 192 0 19 chr2 225868908 225868960 -24818894 + T-rich Low_complexity Low_complexity 2 52 0 396 348 6 28 chr2 225869053 225869231 -24818623 + MER91A DNA MER1_type 20 193 -3 1213 141 28 8 chr2 225869291 225869520 -24818334 + LTR10A LTR ERV1 319 549 -84 391 156 166 3 chr2 225869897 225870019 -24817835 - L1ME4a LINE L1 -683 5495 5376 4428 171 16 66 chr2 225870022 225870148 -24817706 - L1M4 LINE L1 -739 5435 5304 1817 143 0 45 chr2 225870148 225870456 -24817398 - AluSx SINE Alu -18 294 1 4428 171 16 66 chr2 225870456 225870632 -24817222 - L1M4 LINE L1 -870 5304 5121 2054 113 7 0 chr2 225870632 225870915 -24816939 - AluSc SINE Alu -20 289 5 2235 110 0 3 chr2 225870920 225871230 -24816624 - AluSx SINE Alu -3 309 1 4428 171 16 66 chr2 225871230 225871998 -24815856 - L1M4 LINE L1 -1057 5117 4398 1568 197 62 22 chr2 225871998 225872354 -24815500 - MLT1A2 LTR MaLR -4 370 1 4428 171 16 66 chr2 225872354 225872403 -24815451 - L1M4 LINE L1 -1776 4398 4348 264 329 32 63 chr2 225872538 225872696 -24815158 - L2 LINE L2 -4 3268 3116 237 313 161 0 chr2 225872735 225872847 -24815007 + L2 LINE L2 3180 3309 -4 260 267 199 0 chr2 225873376 225873522 -24814332 - HAL1b LINE L1 -237 1111 937 865 232 43 5 chr2 225873529 225873740 -24814114 + MER20 DNA MER1_type 1 219 0 932 227 65 5 chr2 225873849 225874065 -24813789 + MIR SINE MIR 13 241 -21 2237 88 0 13 chr2 225874148 225874455 -24813399 - AluSg SINE Alu -7 303 1 365 247 132 26 chr2 225874703 225874819 -24813035 - L1MC4a LINE L1 -1645 6163 6061 1555 174 31 7 chr2 225874819 225875106 -24812748 - AluJb SINE Alu -18 294 1 365 247 132 26 chr2 225875106 225875216 -24812638 - L1MC4a LINE L1 -1747 6061 5913 367 292 26 0 chr2 225875219 225875332 -24812522 - L1MC4a LINE L1 -1927 5881 5766 272 260 14 14 chr2 225875343 225875416 -24812438 - L1MC4a LINE L1 -2209 5599 5527 189 0 0 0 chr2 225876198 225876219 -24811635 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 198 0 0 0 chr2 225876639 225876661 -24811193 + (T)n Simple_repeat Simple_repeat 1 22 0 364 127 0 0 chr2 225877155 225877210 -24810644 - MADE1 DNA Mariner 0 80 26 2200 91 0 0 chr2 225877210 225877495 -24810359 + AluSx SINE Alu 18 302 -10 22 70 0 0 chr2 225877766 225877809 -24810045 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr2 225878036 225878061 -24809793 + AT_rich Low_complexity Low_complexity 1 25 0 1802 84 84 15 chr2 225878061 225878351 -24809503 + AluY SINE Alu 1 308 0 709 221 108 38 chr2 225878984 225879224 -24808630 - MIR SINE MIR -1 261 5 1899 136 7 23 chr2 225880616 225880926 -24806928 - AluSx SINE Alu -7 305 1 261 150 0 0 chr2 225882484 225882524 -24805330 + LTR67 LTR ERVL 1 40 -517 1724 146 11 7 chr2 225883358 225883638 -24804216 - AluJb SINE Alu -24 288 8 660 300 97 40 chr2 225883697 225884217 -24803637 + L2 LINE L2 2714 3263 -9 204 125 0 0 chr2 225884234 225884266 -24803588 + (GGGAA)n Simple_repeat Simple_repeat 1 32 0 1778 117 43 28 chr2 225884300 225884582 -24803272 + AluSg SINE Alu 21 306 -4 1960 140 27 59 chr2 225884945 225885294 -24802560 + L1MB7 LINE L1 5770 6106 -78 1635 182 7 3 chr2 225885294 225885596 -24802258 - AluSx SINE Alu -3 309 7 1960 140 27 59 chr2 225885596 225885654 -24802200 + L1MB7 LINE L1 6106 6164 -20 233 211 0 0 chr2 225886167 225886219 -24801635 - L1ME3A LINE L1 -10 6160 6109 2208 88 0 0 chr2 225886791 225887086 -24800768 - AluY SINE Alu -16 295 1 2219 81 0 7 chr2 225887086 225887384 -24800470 - AluSq SINE Alu -17 296 1 376 317 42 0 chr2 225887842 225887962 -24799892 - MER5B DNA MER1_type -48 130 6 613 285 76 53 chr2 225891875 225892286 -24795568 + L1MC5 LINE L1 7271 7671 -290 1869 118 0 4 chr2 225892286 225892549 -24795305 + AluSg SINE Alu 39 300 -10 1918 132 0 20 chr2 225892554 225892858 -24794996 + AluSx SINE Alu 1 298 -14 613 285 76 53 chr2 225892858 225892958 -24794896 + L1MC5 LINE L1 7674 7770 -191 2164 81 17 14 chr2 225892958 225893253 -24794601 - AluSc SINE Alu -13 296 1 613 285 76 53 chr2 225893253 225893469 -24794385 + L1MC5 LINE L1 7770 7929 -32 23 0 0 0 chr2 225893626 225893649 -24794205 + AT_rich Low_complexity Low_complexity 1 23 0 517 237 105 20 chr2 225893649 225893801 -24794053 - FRAM SINE Alu -1 165 1 434 288 0 8 chr2 225893855 225893973 -24793881 - MIR SINE MIR -56 206 90 2049 103 0 23 chr2 225896519 225896819 -24791035 - AluSg SINE Alu -17 293 1 315 127 268 0 chr2 225896908 225896979 -24790875 - MIR SINE MIR -115 147 58 616 261 22 0 chr2 225898204 225898342 -24789512 - MIR SINE MIR -59 203 63 236 246 7 0 chr2 225898635 225898773 -24789081 + (CA)n Simple_repeat Simple_repeat 2 140 0 633 181 86 0 chr2 225900697 225900813 -24787041 - FLAM_A SINE Alu -7 126 1 413 290 71 30 chr2 225901139 225901495 -24786359 + MLT1J LTR MaLR 101 511 0 626 305 57 12 chr2 225901539 225901785 -24786069 - MIR SINE MIR -1 261 5 225 0 0 0 chr2 225901834 225901859 -24785995 + (CAGG)n Simple_repeat Simple_repeat 2 26 0 1067 291 86 36 chr2 225902621 225903178 -24784676 + MLT1K LTR MaLR 2 586 -2 2121 108 0 7 chr2 225903206 225903529 -24784325 + AluSq SINE Alu 1 321 0 1861 134 0 7 chr2 225903663 225903972 -24783882 + AluJb SINE Alu 1 307 0 425 319 67 24 chr2 225904351 225904561 -24783293 + L1MEd LINE L1 23 241 -5878 808 311 71 36 chr2 225904680 225905662 -24782192 + L1MEd LINE L1 490 1556 -4754 328 342 66 52 chr2 225905679 225906042 -24781812 + L1MEd LINE L1 1526 1893 -4236 493 183 9 9 chr2 225906399 225906514 -24781340 + CT-rich Low_complexity Low_complexity 1 115 0 349 279 48 0 chr2 225906776 225906880 -24780974 + MIR SINE MIR 68 176 -86 1337 244 64 56 chr2 225906883 225907384 -24780470 + L1ME3A LINE L1 5470 5974 -196 1978 133 0 17 chr2 225907386 225907686 -24780168 + AluSx SINE Alu 1 295 -17 845 197 29 109 chr2 225907779 225908094 -24779760 + L1MDa LINE L1 1336 1674 -4708 2209 86 10 3 chr2 225908094 225908396 -24779458 - AluSq SINE Alu -9 304 1 845 197 29 109 chr2 225908396 225908506 -24779348 + L1MDa LINE L1 1674 1791 -4591 3588 107 73 65 chr2 225908610 225909915 -24777939 + SVA Other Other 432 1140 -246 202 270 0 122 chr2 225910468 225910583 -24777271 - MIR SINE MIR -82 180 80 1167 37 0 0 chr2 225910584 225910719 -24777135 + AluSq/x SINE Alu 1 135 -178 1753 138 54 0 chr2 225910719 225910995 -24776859 + AluJb SINE Alu 1 291 -21 273 191 7 154 chr2 225911317 225911393 -24776461 + MER113 DNA MER1_type? 8 94 -427 2259 102 0 16 chr2 225911393 225911569 -24776285 - AluSx SINE Alu -2 310 133 324 0 0 0 chr2 225911569 225911605 -24776249 + (TG)n Simple_repeat Simple_repeat 2 37 0 1757 120 0 0 chr2 225911607 225911841 -24776013 - AluSq SINE Alu -29 284 51 2259 102 0 16 chr2 225911841 225911976 -24775878 - AluSx SINE Alu -180 132 1 1745 170 14 0 chr2 225911979 225912268 -24775586 - AluJo SINE Alu -19 293 1 273 191 7 154 chr2 225912268 225912323 -24775531 + MER113 DNA MER1_type? 96 123 -398 2064 117 10 0 chr2 225912478 225912776 -24775078 + AluSx SINE Alu 1 301 -11 330 293 121 25 chr2 225912854 225913011 -24774843 - MIR SINE MIR -62 200 29 2213 125 0 0 chr2 225913082 225913394 -24774460 + AluSx SINE Alu 1 312 0 734 242 214 28 chr2 225913947 225914307 -24773547 + LTR16A LTR ERVL 19 445 -5 1641 108 10 73 chr2 225914330 225914516 -24773338 - AluSx SINE Alu 0 312 149 2292 95 0 0 chr2 225914516 225914820 -24773034 - AluSc SINE Alu -5 304 1 1641 108 10 73 chr2 225914820 225914921 -24772933 - AluSx SINE Alu -163 149 43 1805 134 52 36 chr2 225915198 225915504 -24772350 - AluSx SINE Alu -1 311 1 1060 314 157 18 chr2 225916330 225917051 -24770803 + L2 LINE L2 1938 2758 -556 427 326 21 87 chr2 225917413 225917984 -24769870 + L2 LINE L2 2741 3265 -7 244 233 0 41 chr2 225918769 225918842 -24769012 + GA-rich Low_complexity Low_complexity 1 70 0 339 25 0 0 chr2 225919352 225919392 -24768462 + (TG)n Simple_repeat Simple_repeat 1 40 0 201 372 0 0 chr2 225922000 225922094 -24765760 + C-rich Low_complexity Low_complexity 3 96 0 233 263 6 69 chr2 225922186 225922361 -24765493 + C-rich Low_complexity Low_complexity 4 167 0 21 0 0 0 chr2 225922450 225922471 -24765383 + GC_rich Low_complexity Low_complexity 1 21 0 339 308 140 0 chr2 225923937 225924080 -24763774 + MIR SINE MIR 84 246 -16 1767 109 0 115 chr2 225924887 225925217 -24762637 - AluSx SINE Alu 0 312 21 2069 140 3 0 chr2 225925252 225925559 -24762295 - AluSx SINE Alu -4 308 1 2057 128 0 3 chr2 225926124 225926428 -24761426 + AluSx SINE Alu 4 306 -6 181 257 19 124 chr2 225926478 225926583 -24761271 - L3 LINE CR1 -4 1573 1480 2148 113 3 25 chr2 225926802 225927121 -24760733 - AluSx SINE Alu 0 312 1 300 297 42 55 chr2 225928010 225928175 -24759679 - MIR3 SINE MIR -9 199 37 267 150 67 0 chr2 225929173 225929233 -24758621 - MIR SINE MIR -97 165 102 221 295 42 0 chr2 225929277 225929349 -24758505 - MIR SINE MIR -103 105 34 225 329 95 7 chr2 225931851 225931988 -24755866 - L3b LINE CR1 -149 1434 1286 2137 128 3 6 chr2 225932492 225932805 -24755049 + AluSx SINE Alu 1 312 0 267 260 30 40 chr2 225932907 225933007 -24754847 - MIR3 SINE MIR -12 196 98 30 83 0 0 chr2 225934140 225934212 -24753642 + GC_rich Low_complexity Low_complexity 1 72 0 263 319 134 43 chr2 225937271 225937395 -24750459 + MIR SINE MIR 9 120 -142 1164 230 106 91 chr2 225937395 225937725 -24750129 - MLT1H1 LTR MaLR 0 555 212 2470 70 0 6 chr2 225937725 225938038 -24749816 - AluY SINE Alu 0 311 1 1164 230 106 91 chr2 225938038 225938254 -24749600 - MLT1H1 LTR MaLR -343 212 1 263 319 134 43 chr2 225938254 225938361 -24749493 + MIR SINE MIR 120 261 -1 583 293 55 53 chr2 225938394 225938811 -24749043 - MLT1K LTR MaLR -2 586 169 210 169 169 31 chr2 225939729 225939794 -24748060 + MIR SINE MIR 74 147 -115 194 88 0 29 chr2 225940455 225940489 -24747365 + (GGCTG)n Simple_repeat Simple_repeat 4 36 0 222 140 35 35 chr2 225940658 225940715 -24747139 + (CTAGGG)n Simple_repeat Simple_repeat 1 57 0 265 305 65 39 chr2 225941084 225941238 -24746616 - MER5A DNA MER1_type 0 189 32 * 267 310 62 41 chr2 225941107 225941252 -24746602 + MER5A DNA MER1_type 36 183 -6 210 276 30 82 chr2 225941923 225942057 -24745797 - MIR SINE MIR -113 149 23 378 271 164 14 chr2 225942278 225942418 -24745436 + MIR3 SINE MIR 33 193 -15 261 0 0 0 chr2 225944090 225944119 -24743735 + (TG)n Simple_repeat Simple_repeat 2 30 0 261 0 0 0 chr2 225944945 225944974 -24742880 + (TG)n Simple_repeat Simple_repeat 2 30 0 207 0 0 0 chr2 225946939 225946962 -24740892 + (CCCCG)n Simple_repeat Simple_repeat 2 24 0 226 197 33 16 chr2 225947118 225947179 -24740675 + (CCCCG)n Simple_repeat Simple_repeat 1 62 0 24 67 0 0 chr2 225947292 225947337 -24740517 + GC_rich Low_complexity Low_complexity 1 45 0 679 269 95 33 chr2 225949274 225949516 -24738338 - MIR SINE MIR -5 257 1 203 146 0 91 chr2 225949867 225949922 -24737932 + (TCCCC)n Simple_repeat Simple_repeat 1 50 0 190 186 129 29 chr2 225950563 225950633 -24737221 + MIR SINE MIR 16 92 -116 298 346 24 8 chr2 225951069 225951196 -24736658 + L3b LINE CR1 1269 1397 -186 * 923 213 60 52 chr2 225951186 225951435 -24736419 - MIR SINE MIR 0 262 12 242 101 43 58 chr2 225951441 225951510 -24736344 + T-rich Low_complexity Low_complexity 1 68 0 207 0 0 0 chr2 225952324 225952347 -24735507 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4831 63 2 0 chr2 225952347 225952951 -24734903 - L1PB1 LINE L1 -11 6140 5536 256 350 14 28 chr2 225953218 225953361 -24734493 + MIR3 SINE MIR 41 181 -27 350 210 136 0 chr2 225953905 225953986 -24733868 - L2 LINE L2 -8 3264 3173 353 300 0 0 chr2 225954113 225954193 -24733661 + MIR3 SINE MIR 127 206 -2 1038 251 12 21 chr2 225954408 225954651 -24733203 - MIR SINE MIR -2 260 20 477 0 0 0 chr2 225955710 225955763 -24732091 + (CA)n Simple_repeat Simple_repeat 1 53 0 22 99 0 0 chr2 225956352 225956423 -24731431 + GC_rich Low_complexity Low_complexity 1 71 0 224 241 35 17 chr2 225956773 225956831 -24731023 + L3 LINE CR1 1513 1571 -6 771 286 90 76 chr2 225957144 225957898 -24729956 - L2 LINE L2 -2 3311 2538 23 68 0 0 chr2 225960553 225960597 -24727257 + GC_rich Low_complexity Low_complexity 1 44 0 242 253 24 24 chr2 225962362 225962445 -24725409 + L1ME4a LINE L1 5982 6064 -57 1581 156 17 34 chr2 225962577 225962872 -24724982 - AluJb SINE Alu -22 290 1 276 164 16 0 chr2 225963357 225963418 -24724436 - L1MC4 LINE L1 0 8042 7981 1703 208 58 41 chr2 225963421 225963475 -24724379 - L1MC4 LINE L1 -145 7897 7845 2357 57 0 11 chr2 225963475 225963821 -24724033 - AluY SINE Alu 0 345 3 1703 208 58 41 chr2 225963821 225964232 -24723622 - L1MC4 LINE L1 -197 7845 7423 1362 135 156 139 chr2 225964221 225964613 -24723241 - L1MC4 LINE L1 -1022 7020 6617 * 620 36 12 0 chr2 225964613 225964696 -24723158 + (TCTA)n Simple_repeat Simple_repeat 4 87 0 1362 135 156 139 chr2 225964696 225964798 -24723056 - L1MC4 LINE L1 -1425 6617 6518 1841 158 3 7 chr2 225965052 225965359 -24722495 - AluJb SINE Alu 0 306 1 935 236 64 169 chr2 225965369 225965741 -24722113 + L2 LINE L2 2372 2753 -560 873 70 35 0 chr2 225965741 225965856 -24721998 + AluSc SINE Alu 115 233 -76 935 236 64 169 chr2 225965856 225966125 -24721729 + L2 LINE L2 2753 3048 -265 920 195 0 0 chr2 225966128 225966282 -24721572 + FRAM SINE Alu 9 162 -14 742 252 128 24 chr2 225966305 225966555 -24721299 + L2 LINE L2 3038 3313 0 2286 120 3 0 chr2 225966624 225966923 -24720931 - AluSx SINE Alu -12 300 1 2053 105 0 37 chr2 225967000 225967317 -24720537 - AluSx SINE Alu 0 306 1 458 224 82 0 chr2 225967361 225967459 -24720395 + L2 LINE L2 3208 3313 0 510 246 8 15 chr2 225967809 225967943 -24719911 - LTR67 LTR ERVL 0 557 425 798 261 34 102 chr2 225968482 225968796 -24719058 + MLT1H1 LTR MaLR 63 397 -158 1982 135 4 4 chr2 225968796 225969077 -24718777 + AluSx SINE Alu 1 281 -31 216 0 0 0 chr2 225969081 225969105 -24718749 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 798 261 34 102 chr2 225969105 225969314 -24718540 + MLT1H1 LTR MaLR 400 555 0 635 301 51 43 chr2 225969417 225969673 -24718181 + MIR SINE MIR 3 260 -2 252 296 56 46 chr2 225969694 225969802 -24718052 + MIR SINE MIR 33 141 -121 311 226 48 12 chr2 225970414 225970498 -24717356 + L1ME3A LINE L1 5893 5979 -191 561 169 0 0 chr2 225970509 225970592 -24717262 + FRAM SINE Alu 67 149 -27 322 21 43 0 chr2 225970592 225970639 -24717215 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 584 229 80 5 chr2 225970639 225970827 -24717027 + L1ME3A LINE L1 5966 6167 -3 2256 83 28 0 chr2 225970829 225971118 -24716736 + AluY SINE Alu 3 299 -12 2081 117 0 26 chr2 225971245 225971552 -24716302 + AluSq SINE Alu 1 299 -14 424 250 243 7 chr2 225971711 225971855 -24715999 - MIR SINE MIR -12 250 73 494 313 88 5 chr2 225971996 225972188 -24715666 + MIR SINE MIR 33 240 -22 581 184 205 136 chr2 225972856 225973232 -24714622 + MER69 DNA AcHobo 14 415 -811 1489 214 123 8 chr2 225973304 225973799 -24714055 + MER69 DNA AcHobo 1975 2526 0 476 260 41 16 chr2 225973846 225973969 -24713885 - MIR3 SINE MIR -53 155 30 248 270 204 0 chr2 225974414 225974551 -24713303 + L2 LINE L2 1784 1948 -1366 1779 127 15 8 chr2 225974575 225974842 -24713012 - AluJb SINE Alu -43 269 1 460 231 29 10 chr2 225975034 225975138 -24712716 - L2 LINE L2 -20 3293 3188 195 42 0 0 chr2 225975167 225975191 -24712663 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4246 154 44 48 chr2 225975249 225975344 -24712510 - L1MB8 LINE L1 -5 6242 6148 2453 95 0 7 chr2 225975344 225975650 -24712204 + AluSx SINE Alu 1 304 -8 4246 154 44 48 chr2 225975650 225976235 -24711619 - L1MB8 LINE L1 -99 6148 5562 2275 152 76 61 chr2 225976235 225976695 -24711159 + MLT1C LTR MaLR 1 467 0 4246 154 44 48 chr2 225976695 225976991 -24710863 - L1MB8 LINE L1 -685 5562 5270 1776 151 16 32 chr2 225976991 225977302 -24710552 - AluJo SINE Alu -6 306 1 4246 154 44 48 chr2 225977302 225977411 -24710443 - L1MB8 LINE L1 -977 5270 5162 185 188 0 0 chr2 225977431 225977463 -24710391 + L2 LINE L2 3017 3048 -224 483 204 44 66 chr2 225977527 225977664 -24710190 + L2 LINE L2 3139 3272 0 664 302 96 47 chr2 225977678 225977711 -24710143 + L2 LINE L2 1969 1999 -1315 2391 100 0 3 chr2 225977711 225978020 -24709834 - AluSx SINE Alu -4 308 1 664 302 96 47 chr2 225978020 225978370 -24709484 + L2 LINE L2 1999 2371 -943 594 217 16 0 chr2 225978505 225978634 -24709220 + L1ME LINE L1 5589 5719 -451 3362 193 78 86 chr2 225978793 225979065 -24708789 - L1MB8 LINE L1 -2737 3478 3205 2003 140 3 10 chr2 225979065 225979357 -24708497 + AluSx SINE Alu 11 300 -12 3362 193 78 86 chr2 225979357 225979393 -24708461 - L1MB8 LINE L1 -3010 3205 3170 708 120 30 0 chr2 225979393 225979493 -24708361 - U6 snRNA snRNA -3 104 2 3362 193 78 86 chr2 225979493 225979663 -24708191 - L1MB8 LINE L1 -3045 3170 3000 2101 108 17 3 chr2 225979663 225979951 -24707903 - AluSx SINE Alu -20 292 1 3362 193 78 86 chr2 225979951 225980953 -24706901 - L1MB8 LINE L1 -3215 3000 2096 1714 186 10 0 chr2 225980953 225981243 -24706611 - AluJo SINE Alu -19 293 1 3362 193 78 86 chr2 225981243 225981317 -24706537 - L1MB8 LINE L1 -4119 2096 2023 1666 214 57 0 chr2 225981315 225981754 -24706100 - L1MEc LINE L1 -5263 1133 670 * 688 206 121 20 chr2 225981754 225982002 -24705852 + L1M4 LINE L1 2731 3003 -3143 872 226 66 109 chr2 225982023 225982459 -24705395 - L1MEc LINE L1 -3425 2790 2337 804 83 15 15 chr2 225982459 225982591 -24705263 + (TTTC)n Simple_repeat Simple_repeat 2 133 0 872 226 66 109 chr2 225982591 225982654 -24705200 - L1MEc LINE L1 -3878 2337 2273 2144 119 17 0 chr2 225982654 225982947 -24704907 - AluSx SINE Alu -14 298 1 872 226 66 109 chr2 225982947 225983404 -24704450 - L1MEc LINE L1 -3942 2273 1925 779 186 0 0 chr2 225983407 225983536 -24704318 - FLAM_A SINE Alu -4 129 1 278 115 19 0 chr2 225984062 225984114 -24703740 + CT-rich Low_complexity Low_complexity 2 54 0 2505 63 7 0 chr2 225984355 225984657 -24703197 - AluY SINE Alu -7 304 1 383 204 21 54 chr2 225984699 225984792 -24703062 - L1MC4 LINE L1 -1339 6703 6614 312 235 10 92 chr2 225984705 225984803 -24703051 + L1MC4 LINE L1 6614 6703 -1339 * 2587 139 31 10 chr2 225984999 225985416 -24702438 + MSTB LTR MaLR 1 426 0 1642 165 187 11 chr2 225985666 225986030 -24701824 - MSTA LTR MaLR 0 428 1 9440 121 18 44 chr2 225986030 225986341 -24701513 - MSTA-int LTR MaLR 0 1580 1262 2135 134 3 3 chr2 225986341 225986646 -24701208 - AluSx SINE Alu -7 305 1 9440 121 18 44 chr2 225986646 225987927 -24699927 - MSTA-int LTR MaLR -318 1262 30 2005 147 131 11 chr2 225987944 225988326 -24699528 - MSTA LTR MaLR 0 428 1 243 79 0 0 chr2 225988454 225988492 -24699362 + (ATG)n Simple_repeat Simple_repeat 1 38 0 622 242 5 81 chr2 225988497 225988683 -24699171 - MIR SINE MIR -19 243 72 430 162 0 14 chr2 225988816 225988890 -24698964 - MIR SINE MIR 0 262 190 243 0 0 0 chr2 225988990 225989017 -24698837 + (A)n Simple_repeat Simple_repeat 1 27 0 335 288 0 0 chr2 225989056 225989129 -24698725 - L2 LINE L2 -3 3310 3238 445 275 84 87 chr2 225989288 225989623 -24698231 - L2 LINE L2 -5 3267 2934 1209 264 41 5 chr2 225989888 225990255 -24697599 + L1MC4a LINE L1 5527 5906 -1902 411 256 70 26 chr2 225990262 225990418 -24697436 + MLT1L LTR MaLR 442 604 -11 967 314 79 17 chr2 225990945 225991416 -24696438 - L2 LINE L2 -1 3312 2813 1021 233 127 58 chr2 225991475 225991892 -24695962 + MLT1J LTR MaLR 1 446 -65 226 295 32 42 chr2 225991901 225991996 -24695858 - L2 LINE L2 -661 2653 2560 304 304 35 35 chr2 225992029 225992144 -24695710 + MIR SINE MIR 11 125 -137 776 193 10 107 chr2 225992192 225992389 -24695465 + MLT2D LTR ERVL 235 412 -2 291 216 45 11 chr2 225992395 225992483 -24695371 - L1ME3A LINE L1 -3 6167 6077 1588 188 55 7 chr2 225992569 225992862 -24694992 + AluJo SINE Alu 1 307 -5 2444 88 0 0 chr2 225992891 225993187 -24694667 + AluSc SINE Alu 4 299 -10 1681 191 48 112 chr2 225993479 225993967 -24693887 - MLT2B3 LTR ERVL 0 544 112 6758 68 16 29 chr2 225993967 225995851 -24692003 + SVA Other Other 1 1386 0 1681 191 48 112 chr2 225995851 225995957 -24691897 - MLT2B3 LTR ERVL -432 112 1 891 258 88 111 chr2 225996031 225996367 -24691487 + MLT1F1 LTR MaLR 255 591 -2 2094 244 68 66 chr2 225996373 225996911 -24690943 - L1ME LINE L1 -422 5748 5213 2288 122 0 3 chr2 225996911 225997222 -24690632 - AluSx SINE Alu -2 310 1 2094 244 68 66 chr2 225997222 225997321 -24690533 - L1ME LINE L1 -957 5213 5116 2097 101 14 27 chr2 225997321 225997643 -24690211 - AluSx SINE Alu 0 312 1 2094 244 68 66 chr2 225997643 225997831 -24690023 - L1ME LINE L1 -1054 5116 4930 1909 93 104 0 chr2 225997831 225998134 -24689720 - AluSq SINE Alu 0 330 1 2094 244 68 66 chr2 225998134 225998420 -24689434 - L1ME LINE L1 -1240 4930 4646 2106 134 0 38 chr2 225998420 225998740 -24689114 - AluSx SINE Alu -4 308 1 2094 244 68 66 chr2 225998740 225999215 -24688639 - L1ME LINE L1 -1524 4646 4156 925 179 14 27 chr2 225999340 225999621 -24688233 - MLT1A1 LTR MaLR -2 363 1 608 210 18 30 chr2 225999637 225999804 -24688050 - L1MC4a LINE L1 -103 7705 7541 447 183 75 41 chr2 225999793 225999944 -24687910 - L1MD3 LINE L1 -490 7318 7146 * 2293 199 90 45 chr2 225999933 226000447 -24687407 - L1MC4 LINE L1 -963 7079 6524 1778 160 17 27 chr2 226000447 226000741 -24687113 - AluJb SINE Alu -21 291 1 2293 199 90 45 chr2 226000741 226000827 -24687027 - L1MC4 LINE L1 -1518 6524 6443 2268 251 85 48 chr2 226001396 226001630 -24686224 - MER69B DNA AcHobo -1313 1213 989 1704 185 3 17 chr2 226001630 226001932 -24685922 - AluJb SINE Alu -11 301 4 2268 251 85 48 chr2 226001932 226002580 -24685274 - MER69B DNA AcHobo -1537 989 298 1471 217 54 61 chr2 226002580 226003040 -24684814 + MLT1C LTR MaLR 4 460 -7 921 272 61 7 chr2 226003036 226003330 -24684524 - MER69B DNA AcHobo -914 312 3 * 736 294 10 15 chr2 226003342 226003546 -24684308 + MIR SINE MIR 8 210 -52 567 29 0 0 chr2 226003562 226003631 -24684223 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 5119 163 34 36 chr2 226003707 226004191 -24683663 - L1PA15 LINE L1 -186 5979 5495 1621 176 64 20 chr2 226004191 226004487 -24683367 - AluJb SINE Alu -1 311 3 5119 163 34 36 chr2 226004487 226005892 -24681962 - L1PA15 LINE L1 -670 5495 4106 402 327 32 13 chr2 226005894 226006050 -24681804 + L1MC4 LINE L1 7883 8041 -1 1927 154 7 10 chr2 226006107 226006399 -24681455 + AluJo SINE Alu 1 291 -21 366 273 62 25 chr2 226006496 226006657 -24681197 - L2 LINE L2 -337 2977 2811 1819 210 77 66 chr2 226006665 226007105 -24680749 - MLT1H1 LTR MaLR 0 555 106 714 154 8 0 chr2 226007105 226007222 -24680632 - FLAM_C SINE Alu -15 118 1 1819 210 77 66 chr2 226007222 226007328 -24680526 - MLT1H1 LTR MaLR -449 106 3 1813 232 29 0 chr2 226007329 226007747 -24680107 - L2 LINE L2 -507 2807 2378 30 27 0 0 chr2 226008693 226008730 -24679124 + GC_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr2 226010425 226010447 -24677407 + GC_rich Low_complexity Low_complexity 1 22 0 49 66 0 0 chr2 226012053 226012144 -24675710 + GC_rich Low_complexity Low_complexity 1 91 0 239 265 26 26 chr2 226012372 226012489 -24675365 + (CCCCG)n Simple_repeat Simple_repeat 1 117 0 377 303 157 0 chr2 226013382 226013560 -24674294 - MIR SINE MIR -42 220 15 258 299 31 0 chr2 226013664 226013761 -24674093 - MIR3 SINE MIR -6 202 103 599 308 78 30 chr2 226014072 226014403 -24673451 - L3b LINE CR1 -116 1467 1121 274 297 221 10 chr2 226014626 226014821 -24673033 - MIR SINE MIR -7 255 20 1196 187 98 53 chr2 226015440 226015798 -24672056 - MLT1A2 LTR MaLR 0 374 1 378 335 67 5 chr2 226015801 226015995 -24671859 - L2 LINE L2 -256 3057 2852 35 78 0 0 chr2 226016035 226016112 -24671742 + AT_rich Low_complexity Low_complexity 1 77 0 253 100 450 0 chr2 226016132 226016192 -24671662 + L2 LINE L2 3210 3296 -17 982 259 49 63 chr2 226016192 226016325 -24671529 + L1ME3A LINE L1 5401 5534 -636 2220 102 0 37 chr2 226016325 226016649 -24671205 + AluSx SINE Alu 1 312 0 982 259 49 63 chr2 226016649 226017051 -24670803 + L1ME3A LINE L1 5534 5931 -239 1756 159 10 17 chr2 226017061 226017356 -24670498 + AluJo SINE Alu 1 293 -19 2151 142 0 0 chr2 226017358 226017669 -24670185 + AluSx SINE Alu 1 311 -1 360 162 102 52 chr2 226017704 226017847 -24670007 + MLT1E2 LTR MaLR 2 170 -454 1445 264 94 47 chr2 226018770 226019320 -24668534 - MLT1K LTR MaLR -3 585 10 2322 94 10 0 chr2 226019438 226019736 -24668118 + AluSp SINE Alu 1 301 -12 272 304 11 11 chr2 226019736 226019828 -24668026 - MER5B DNA MER1_type -83 95 4 2281 106 0 3 chr2 226020300 226020602 -24667252 + AluSp SINE Alu 1 301 -12 237 287 23 11 chr2 226022422 226022509 -24665345 - MIR SINE MIR -147 115 28 1824 144 54 0 chr2 226022626 226022904 -24664950 + AluJb SINE Alu 1 293 -19 194 250 50 50 chr2 226024679 226024739 -24663115 - L3 LINE CR1 -2 1575 1516 441 236 73 0 chr2 226024799 226024922 -24662932 - MIR SINE MIR -57 151 20 22 80 0 0 chr2 226028055 226028105 -24659749 + GC_rich Low_complexity Low_complexity 1 50 0 25 65 0 0 chr2 226028115 226028161 -24659693 + GC_rich Low_complexity Low_complexity 1 46 0 28 61 0 0 chr2 226029158 226029207 -24658647 + GC_rich Low_complexity Low_complexity 1 49 0 254 164 18 0 chr2 226029646 226029701 -24658153 + CT-rich Low_complexity Low_complexity 2 57 0 2190 114 7 23 chr2 226033228 226033535 -24654319 + AluSx SINE Alu 1 302 -10 2262 115 0 0 chr2 226033638 226033967 -24653887 + AluSx SINE Alu 1 329 0 1008 199 0 0 chr2 226033967 226034133 -24653721 + AluJo/FRAM SINE Alu 134 299 -13 2213 96 10 22 chr2 226034512 226034826 -24653028 + AluY SINE Alu 1 310 -1 216 0 0 0 chr2 226034826 226034850 -24653004 + (TA)n Simple_repeat Simple_repeat 1 24 0 1177 136 40 6 chr2 226034867 226035044 -24652810 + AluSg/x SINE Alu 123 305 -5 655 308 149 12 chr2 226035050 226035465 -24652389 + L1ME LINE L1 5352 5823 -298 2359 72 7 3 chr2 226035471 226035763 -24652091 + AluSc SINE Alu 1 293 -16 1865 135 35 7 chr2 226035775 226036057 -24651797 + AluSx SINE Alu 3 292 -20 365 188 12 0 chr2 226036355 226036440 -24651414 + GA-rich Low_complexity Low_complexity 1 86 0 241 154 0 0 chr2 226036877 226036916 -24650938 + L2 LINE L2 3257 3295 -18 2575 60 0 10 chr2 226037144 226037458 -24650396 - AluY SINE Alu 0 311 1 950 281 119 38 chr2 226037549 226037842 -24650012 - L1M4 LINE L1 -1112 5034 4766 2234 136 7 0 chr2 226037842 226038152 -24649702 - AluSx SINE Alu 0 312 1 950 281 119 38 chr2 226038152 226038724 -24649130 - L1M4 LINE L1 -1380 4766 4099 289 307 86 43 chr2 226039082 226039222 -24648632 + MIR SINE MIR 29 176 -32 213 218 269 0 chr2 226039823 226039901 -24647953 + MIR SINE MIR 55 153 -109 330 106 73 0 chr2 226039912 226040035 -24647819 + (TA)n Simple_repeat Simple_repeat 1 132 0 393 231 29 38 chr2 226040261 226040606 -24647248 + (TATAA)n Simple_repeat Simple_repeat 1 342 0 2223 105 0 0 chr2 226040608 226040884 -24646970 - AluSx SINE Alu -24 288 13 313 329 106 0 chr2 226041571 226041732 -24646122 - MIR SINE MIR -79 183 6 803 233 70 19 chr2 226041960 226042175 -24645679 + MIR SINE MIR 37 262 0 697 245 48 21 chr2 226042219 226042407 -24645447 + MIR SINE MIR 12 204 -58 329 291 16 16 chr2 226042460 226042587 -24645267 - MIR SINE MIR -71 191 65 727 233 61 0 chr2 226042911 226043091 -24644763 - MIR SINE MIR -71 191 1 2112 120 33 0 chr2 226043181 226043481 -24644373 + AluSx SINE Alu 1 310 -2 1495 227 0 25 chr2 226043504 226043821 -24644033 + AluJo SINE Alu 3 311 -1 385 295 54 27 chr2 226044288 226044437 -24643417 + MIR SINE MIR 98 250 -12 445 287 21 14 chr2 226045550 226045693 -24642161 - MIR3 SINE MIR -35 173 30 629 335 128 43 chr2 226045925 226046517 -24641337 - L3 LINE CR1 -113 1464 800 2162 119 20 0 chr2 226046517 226046846 -24641008 + AluSx SINE Alu 1 312 0 629 335 128 43 chr2 226046846 226046966 -24640888 - L3 LINE CR1 -777 800 692 1756 161 0 35 chr2 226047182 226047492 -24640362 + AluJb SINE Alu 1 299 -13 1986 139 17 0 chr2 226047701 226047995 -24639859 - AluSx SINE Alu -13 299 1 656 195 8 0 chr2 226048058 226048176 -24639678 - L2 LINE L2 -2 3311 3193 311 237 217 53 chr2 226048293 226048361 -24639493 - LTR33A LTR ERVL 0 523 468 2349 103 0 7 chr2 226048361 226048671 -24639183 + AluSg SINE Alu 1 308 -2 311 237 217 53 chr2 226048671 226048754 -24639100 - LTR33A LTR ERVL -55 468 347 588 217 39 8 chr2 226048784 226048913 -24638941 - LTR33A LTR ERVL -264 259 127 257 203 17 17 chr2 226049345 226049404 -24638450 - L2 LINE L2 -62 3251 3193 182 105 53 35 chr2 226049556 226049613 -24638241 + (CCCTG)n Simple_repeat Simple_repeat 1 58 0 1542 145 27 0 chr2 226050814 226051110 -24636744 - MER33 DNA MER1_type -16 308 5 361 0 0 0 chr2 226051265 226051305 -24636549 + (TTTA)n Simple_repeat Simple_repeat 1 176 0 686 120 0 0 chr2 226051305 226051397 -24636457 - AluSg/x SINE Alu -31 281 190 276 241 265 0 chr2 226051693 226051776 -24636078 - L2 LINE L2 -1 3312 3208 313 340 31 0 chr2 226052100 226052197 -24635657 + MIR SINE MIR 92 191 -71 188 33 0 33 chr2 226052332 226052362 -24635492 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1870 154 0 13 chr2 226054383 226054681 -24633173 + AluSg SINE Alu 1 294 -16 651 262 131 14 chr2 226054925 226055139 -24632715 + MIR SINE MIR 10 248 -14 555 16 0 0 chr2 226055155 226055219 -24632635 + (CA)n Simple_repeat Simple_repeat 1 64 0 2647 60 3 17 chr2 226055584 226055970 -24631884 + L1PA6 LINE L1 5810 6154 0 2449 52 0 52 chr2 226056332 226056660 -24631194 - AluY SINE Alu 0 311 1 359 368 0 0 chr2 226056782 226056907 -24630947 + MIR SINE MIR 25 149 -113 478 335 51 20 chr2 226057528 226057782 -24630072 + MIR SINE MIR 1 262 0 1649 123 0 117 chr2 226057985 226058335 -24629519 - AluJb SINE Alu 0 312 4 1615 217 106 21 chr2 226058341 226058862 -24628992 - L1MD3 LINE L1 -27 7968 7404 898 225 113 37 chr2 226059651 226060089 -24627765 - MLT1F LTR MaLR 0 542 12 359 369 59 5 chr2 226060269 226060456 -24627398 + MIR SINE MIR 58 254 -8 246 294 0 0 chr2 226060462 226060530 -24627324 + MIR SINE MIR 86 153 -109 360 295 27 0 chr2 226061363 226061475 -24626379 + MER91A DNA MER1_type 1 115 -81 236 286 14 14 chr2 226061570 226061640 -24626214 + MER91A DNA MER1_type 121 190 0 248 353 179 21 chr2 226062283 226062980 -24624874 + L2 LINE L2 2445 3251 -21 1995 116 7 11 chr2 226062996 226063307 -24624547 + AluSx SINE Alu 1 310 0 784 292 28 12 chr2 226064078 226064328 -24623526 + MIR SINE MIR 8 261 -1 334 264 124 67 chr2 226064755 226064857 -24622997 + MER5A DNA MER1_type 1 119 -70 2193 98 3 10 chr2 226064857 226065162 -24622692 + AluY SINE Alu 1 303 -8 334 264 124 67 chr2 226065162 226065237 -24622617 + MER5A DNA MER1_type 119 188 -1 23 33 0 0 chr2 226068634 226068664 -24619190 + GC_rich Low_complexity Low_complexity 1 30 0 222 37 0 0 chr2 226070207 226070234 -24617620 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2225 61 4 0 chr2 226070235 226070513 -24617341 - AluY SINE Alu -32 279 1 239 260 33 40 chr2 226071445 226071629 -24616225 + (AGGTG)n Simple_repeat Simple_repeat 1 182 0 261 107 27 87 chr2 226071647 226071796 -24616058 + (GGGTG)n Simple_repeat Simple_repeat 1 140 0 216 97 0 0 chr2 226072750 226072781 -24615073 + (CGG)n Simple_repeat Simple_repeat 3 33 0 216 111 0 0 chr2 226072914 226072950 -24614904 + (CGG)n Simple_repeat Simple_repeat 2 37 0 447 291 14 0 chr2 226073549 226073690 -24614164 - MER91A DNA MER1_type -53 143 1 26 0 0 0 chr2 226076298 226076324 -24611530 + GC_rich Low_complexity Low_complexity 1 26 0 276 312 0 48 chr2 226076971 226077096 -24610758 + C-rich Low_complexity Low_complexity 1 119 0 673 231 29 95 chr2 226078629 226078766 -24609088 + MIR SINE MIR 28 144 -118 2017 125 10 0 chr2 226078766 226079069 -24608785 + AluSx SINE Alu 7 312 0 673 231 29 95 chr2 226079069 226079173 -24608681 + MIR SINE MIR 144 253 -9 233 328 109 17 chr2 226079304 226079423 -24608431 + MIR3 SINE MIR 25 154 -54 249 257 10 79 chr2 226079615 226079716 -24608138 - MIR SINE MIR -56 206 113 259 319 274 0 chr2 226080479 226080614 -24607240 + MER91A DNA MER1_type 25 196 0 2107 136 0 0 chr2 226080685 226080994 -24606860 - AluSc SINE Alu 0 309 1 332 232 30 30 chr2 226082702 226082801 -24605053 + MIR SINE MIR 85 183 -79 439 329 111 69 chr2 226084257 226084857 -24602997 + HAL1 LINE L1 875 1465 -1042 332 232 30 30 chr2 226085357 226085456 -24602398 + MIR SINE MIR 85 183 -79 29 0 0 0 chr2 226086790 226086819 -24601035 + GC_rich Low_complexity Low_complexity 1 29 0 418 341 17 12 chr2 226087914 226088087 -24599767 - MIR SINE MIR -17 245 72 1902 121 0 4 chr2 226088094 226088367 -24599487 + AluJb SINE Alu 1 272 -40 180 0 0 0 chr2 226088382 226088402 -24599452 + (TGGGGG)n Simple_repeat Simple_repeat 5 24 0 405 331 89 0 chr2 226088661 226088830 -24599024 - MIR SINE MIR -57 205 22 754 251 189 47 chr2 226088907 226089289 -24598565 + L2 LINE L2 2877 3312 -1 229 281 16 0 chr2 226091940 226092004 -24595850 - L2 LINE L2 0 3313 3249 192 185 261 0 chr2 226092135 226092200 -24595654 + MIR SINE MIR 170 251 -11 199 303 166 0 chr2 226092524 226092669 -24595185 + MIR3 SINE MIR 30 198 -10 297 0 0 0 chr2 226093977 226094010 -24593844 + (TG)n Simple_repeat Simple_repeat 2 34 0 296 268 116 29 chr2 226094910 226095048 -24592806 - MIR3 SINE MIR -50 158 9 222 331 126 34 chr2 226096987 226097162 -24590692 - MIR SINE MIR -33 229 39 376 236 150 7 chr2 226097366 226097506 -24590348 + MER63 DNA MER1_type 4 789 -273 513 226 0 0 chr2 226097733 226097879 -24589975 + CT-rich Low_complexity Low_complexity 3 148 0 307 366 24 0 chr2 226098523 226098646 -24589208 - L1M4 LINE L1 -2947 3199 3074 1660 164 16 62 chr2 226098646 226098969 -24588885 - AluJo SINE Alu 0 312 5 2230 115 0 0 chr2 226100199 226100503 -24587351 + AluSx SINE Alu 1 304 -8 1828 159 6 19 chr2 226100812 226101127 -24586727 - AluJo SINE Alu -1 311 1 495 226 29 0 chr2 226101327 226101429 -24586425 - MIR SINE MIR -2 260 156 2328 81 0 13 chr2 226101459 226101766 -24586088 - AluSx SINE Alu -9 303 1 616 210 85 28 chr2 226101772 226101948 -24585906 - L1MC5 LINE L1 -26 7935 7750 350 296 68 23 chr2 226101954 226102086 -24585768 - MIR SINE MIR -115 147 10 2168 125 37 0 chr2 226102110 226102407 -24585447 + AluSx SINE Alu 1 308 -4 193 268 0 0 chr2 226102437 226102478 -24585376 + MIR SINE MIR 217 257 -5 852 177 0 0 chr2 226103143 226103318 -24584536 + (GGATG)n Simple_repeat Simple_repeat 2 176 0 902 156 6 0 chr2 226103730 226103903 -24583951 + (GGATG)n Simple_repeat Simple_repeat 4 177 0 588 94 0 12 chr2 226104146 226104231 -24583623 + AluY SINE Alu 2 85 -225 1955 154 6 28 chr2 226105287 226105606 -24582248 - AluJo SINE Alu 0 312 1 388 157 96 0 chr2 226105679 226105762 -24582092 - MIR3 SINE MIR -8 200 110 464 286 70 30 chr2 226105833 226105876 -24581978 + L2 LINE L2 2239 2279 -1035 1588 172 48 82 chr2 226105876 226106254 -24581600 + MLT1A1 LTR MaLR 1 365 0 464 286 70 30 chr2 226106254 226106409 -24581445 + L2 LINE L2 2279 2445 -869 573 291 20 31 chr2 226106766 226107020 -24580834 - MER112 DNA MER1_type -1 259 9 316 292 84 76 chr2 226109561 226110058 -24577796 + L1MC4a LINE L1 5484 5881 -240 2477 95 7 0 chr2 226110313 226110618 -24577236 - AluSx SINE Alu -5 307 1 204 310 126 33 chr2 226110621 226111059 -24576795 + L2 LINE L2 2521 3049 -223 239 307 70 0 chr2 226111111 226111225 -24576629 + L2 LINE L2 3150 3271 -1 346 305 133 10 chr2 226112594 226112797 -24575057 + MIR SINE MIR 24 251 -11 487 319 52 76 chr2 226113893 226114000 -24573854 - MIR SINE MIR 0 262 154 1792 140 49 16 chr2 226114000 226114365 -24573489 - L1MB7 LINE L1 0 6184 5808 487 319 52 76 chr2 226114365 226114386 -24573468 - MIR SINE MIR -108 154 134 1936 148 6 25 chr2 226114386 226114704 -24573150 - AluJo SINE Alu 0 312 1 487 319 52 76 chr2 226114704 226114825 -24573029 - MIR SINE MIR -128 134 18 205 294 118 0 chr2 226114873 226114958 -24572896 - MIR3 SINE MIR -50 158 64 269 183 211 48 chr2 226115470 226115574 -24572280 - MIR SINE MIR -25 237 117 957 165 0 0 chr2 226115576 226115734 -24572120 - FAM SINE Alu -17 158 1 428 255 61 66 chr2 226116467 226116679 -24571175 - MIR SINE MIR -27 235 25 312 249 78 79 chr2 226116963 226117102 -24570752 + MIR SINE MIR 30 167 -59 24 32 0 0 chr2 226119068 226119099 -24568755 + GC_rich Low_complexity Low_complexity 1 31 0 2065 153 3 0 chr2 226119253 226119554 -24568300 + AluSx SINE Alu 1 302 -10 189 216 20 0 chr2 226120066 226120117 -24567737 - MIR SINE MIR -201 61 10 1558 120 46 49 chr2 226121043 226121367 -24566487 - MER33 DNA MER1_type -1 323 1 385 231 0 0 chr2 226121531 226121609 -24566245 - MIR SINE MIR -116 146 69 499 259 29 35 chr2 226123391 226123565 -24564289 - MER91A DNA MER1_type 0 196 24 293 296 20 108 chr2 226124851 226125054 -24562800 + MER91A DNA MER1_type 12 196 0 2130 118 23 3 chr2 226126506 226126811 -24561043 - AluSx SINE Alu -1 311 1 510 294 23 56 chr2 226127572 226127779 -24560075 + L1MC/D LINE L1 3310 3511 -2635 1761 193 3 16 chr2 226127779 226128095 -24559759 + AluJb SINE Alu 1 312 0 209 105 0 26 chr2 226128102 226128140 -24559714 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 1445 281 57 27 chr2 226128144 226128954 -24558900 + L1MC/D LINE L1 3912 4745 -1401 940 277 48 18 chr2 226128950 226129617 -24558237 + L1MC/D LINE L1 4971 5658 -504 * 426 194 119 52 chr2 226129621 226129755 -24558099 + L1M1 LINE L1 16 158 -7407 276 273 71 0 chr2 226129813 226129922 -24557932 + L1MC/D LINE L1 5723 5822 -1986 181 0 69 0 chr2 226129978 226130007 -24557847 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 432 267 105 0 chr2 226130761 226130926 -24556928 + MIR SINE MIR 10 188 -64 271 246 239 15 chr2 226131524 226131657 -24556197 - MIR SINE MIR -62 146 36 2015 154 0 0 chr2 226132251 226132544 -24555310 + AluSx SINE Alu 1 293 -19 722 215 67 163 chr2 226133076 226133262 -24554592 - L2 LINE L2 0 3313 3111 2192 118 0 0 chr2 226133262 226133550 -24554304 + AluSx SINE Alu 3 290 -22 1961 120 36 0 chr2 226133552 226133852 -24554002 + AluSx SINE Alu 1 310 0 2153 156 14 0 chr2 226133855 226134215 -24553639 - MER47A DNA MER2_type -1 365 1 722 215 67 163 chr2 226134215 226134555 -24553299 - L2 LINE L2 -205 3108 2830 2351 107 0 0 chr2 226134797 226135095 -24552759 - AluSc SINE Alu -11 298 1 638 310 37 24 chr2 226135122 226135419 -24552435 + AluJo SINE Alu 2 302 0 1157 147 0 40 chr2 226136474 226136526 -24551328 - AluJo SINE Alu -122 190 137 2487 78 0 16 chr2 226136526 226136835 -24551019 - AluSx SINE Alu -8 304 1 1157 147 0 40 chr2 226136835 226136980 -24550874 - AluJo SINE Alu -175 137 1 192 77 0 0 chr2 226140855 226140881 -24546973 + (CCCCAG)n Simple_repeat Simple_repeat 3 28 0 2176 126 13 0 chr2 226141577 226141886 -24545968 + AluSq SINE Alu 1 313 0 568 251 200 9 chr2 226142219 226142434 -24545420 + MIR SINE MIR 4 259 -3 182 128 26 0 chr2 226142434 226142473 -24545381 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1261 162 0 25 chr2 226142585 226142783 -24545071 + AluJb SINE Alu 6 198 -114 1568 191 64 0 chr2 226143673 226143955 -24543899 - AluJo SINE Alu -12 300 1 592 169 81 8 chr2 226144766 226144890 -24542964 - FLAM_C SINE Alu 0 133 1 1019 195 19 5 chr2 226144944 226145149 -24542705 + MER3 DNA MER1_type 1 208 -1 703 197 43 39 chr2 226145919 226146127 -24541727 + MER106A DNA MER1_type 28 236 0 2182 91 40 3 chr2 226147368 226147665 -24540189 + AluY SINE Alu 1 308 -3 322 263 21 55 chr2 226147666 226147812 -24540042 - L1MC3 LINE L1 -1139 6704 6550 211 234 0 0 chr2 226147827 226147874 -24539980 - MIR SINE MIR -30 232 186 * 248 329 24 0 chr2 226147873 226147958 -24539896 + L2 LINE L2 3225 3311 -2 301 286 13 0 chr2 226148001 226148078 -24539776 - MIR SINE MIR -179 83 6 208 172 13 34 chr2 226148630 226148691 -24539163 - L2 LINE L2 -15 3257 3222 599 247 11 43 chr2 226150179 226150365 -24537489 - L2 LINE L2 0 3313 3134 301 132 0 59 chr2 226150965 226151033 -24536821 + Tigger5 DNA MER2_type 16 79 -2244 432 152 0 109 chr2 226151082 226151106 -24536748 + Tigger5 DNA MER2_type 2242 2267 -56 2316 119 0 0 chr2 226151106 226151416 -24536438 - AluSx SINE Alu 0 312 3 432 152 0 109 chr2 226151416 226151483 -24536371 + Tigger5 DNA MER2_type 2267 2323 0 439 279 120 22 chr2 226151637 226151820 -24536034 + MIR SINE MIR 7 207 -55 195 349 82 0 chr2 226152899 226153045 -24534809 + MIR SINE MIR 77 234 -28 296 309 41 8 chr2 226153185 226153308 -24534546 - MIR SINE MIR 0 262 136 365 286 68 4 chr2 226153350 226153490 -24534364 - MIR SINE MIR -52 156 2 931 250 51 13 chr2 226154809 226155454 -24532400 + L1ME3A LINE L1 5060 5867 -303 981 158 6 0 chr2 226155459 226155624 -24532230 + FRAM SINE Alu 1 166 -10 1269 206 31 24 chr2 226155626 226155917 -24531937 + L1ME3A LINE L1 5863 6155 -15 2066 71 39 61 chr2 226155919 226156230 -24531624 - AluY SINE Alu -7 304 1 3325 149 34 19 chr2 226156257 226156883 -24530971 + L1MB7 LINE L1 5550 6184 0 431 244 42 78 chr2 226157071 226157264 -24530590 + MIR SINE MIR 20 205 -57 831 254 118 14 chr2 226157346 226157566 -24530288 + MIR SINE MIR 20 262 0 279 192 224 56 chr2 226157567 226157692 -24530162 - L2 LINE L2 0 3313 3168 345 282 225 19 chr2 226157926 226158139 -24529715 + L2 LINE L2 2971 3227 -86 * 442 243 72 9 chr2 226158130 226158241 -24529613 - L2 LINE L2 -3 3310 3193 226 180 40 0 chr2 226158914 226158964 -24528890 + (TATG)n Simple_repeat Simple_repeat 3 54 0 1298 152 9 14 chr2 226159203 226159420 -24528434 + AluJo SINE Alu 82 297 -15 1632 180 80 0 chr2 226159423 226159796 -24528058 - Charlie4a DNA MER1_type -105 403 1 27 29 0 0 chr2 226160874 226160908 -24526946 + AT_rich Low_complexity Low_complexity 1 34 0 1432 247 84 21 chr2 226163487 226164096 -24523758 - L2 LINE L2 -4 3309 2662 1499 124 241 11 chr2 226164096 226164378 -24523476 + MER47A DNA MER2_type 20 366 0 6136 259 142 34 chr2 226164378 226164567 -24523287 - L2 LINE L2 -649 2665 2498 573 268 8 0 chr2 226164567 226164694 -24523160 - FLAM_A SINE Alu -5 128 1 6136 259 142 34 chr2 226164694 226165778 -24522076 - L2 LINE L2 -816 2498 1533 887 137 0 0 chr2 226165778 226165902 -24521952 + FLAM_C SINE Alu 1 124 -9 6136 259 142 34 chr2 226165902 226166308 -24521546 - L2 LINE L2 -1781 1533 1172 1060 197 28 23 chr2 226166308 226166526 -24521328 - MER20 DNA MER1_type 0 219 1 6136 259 142 34 chr2 226166526 226167064 -24520790 - L2 LINE L2 -2142 1172 206 1672 173 7 26 chr2 226167429 226167736 -24520118 + AluSx SINE Alu 1 301 -11 618 258 118 25 chr2 226168059 226168222 -24519632 - L1ME4a LINE L1 -94 6027 5880 2112 110 3 0 chr2 226168222 226168522 -24519332 - AluSx SINE Alu -11 301 1 1807 148 3 0 chr2 226168524 226168815 -24519039 - AluJo SINE Alu -17 295 4 2132 92 3 29 chr2 226168825 226169131 -24518723 - AluSc SINE Alu -11 298 1 618 258 118 25 chr2 226169131 226169267 -24518587 - L1ME4a LINE L1 -249 5872 5685 233 288 100 19 chr2 226169330 226169490 -24518364 - L1ME4a LINE L1 -543 5578 5406 1840 129 18 0 chr2 226169541 226169819 -24518035 + 7SLRNA srpRNA srpRNA 1 283 -37 2424 58 0 10 chr2 226169829 226170140 -24517714 + AluY SINE Alu 1 308 -3 857 113 0 8 chr2 226170140 226170258 -24517596 + AluSq SINE Alu 135 251 -62 27 0 0 0 chr2 226170350 226170377 -24517477 + AT_rich Low_complexity Low_complexity 1 27 0 2205 108 0 0 chr2 226170378 226170684 -24517170 - AluSx SINE Alu -6 306 1 686 262 84 5 chr2 226170751 226170965 -24516889 - MIR SINE MIR -4 258 28 300 273 0 26 chr2 226170977 226171054 -24516800 - MIR SINE MIR -157 105 31 202 29 57 0 chr2 226171160 226171195 -24516659 + (TTTTG)n Simple_repeat Simple_repeat 5 41 0 301 258 151 0 chr2 226171250 226171343 -24516511 + MER91C DNA MER1_type 32 138 -2 22 70 0 0 chr2 226172248 226172291 -24515563 + AT_rich Low_complexity Low_complexity 1 43 0 502 241 43 0 chr2 226172564 226172680 -24515174 + L2 LINE L2 3189 3309 -4 206 378 63 0 chr2 226172753 226172864 -24514990 + L2 LINE L2 2942 3059 -213 264 367 58 14 chr2 226172991 226173130 -24514724 + L2 LINE L2 3127 3271 -1 240 370 14 0 chr2 226173135 226173208 -24514646 + L2 LINE L2 3199 3272 0 191 302 115 21 chr2 226174320 226174416 -24513438 - L2 LINE L2 -188 3084 2980 341 331 79 0 chr2 226174434 226174573 -24513281 - MIR3 SINE MIR -23 185 36 549 171 18 27 chr2 226177182 226177293 -24510561 - L2 LINE L2 -1 3312 3203 888 255 13 53 chr2 226177450 226177752 -24510102 - L2 LINE L2 -152 3161 2872 318 26 0 0 chr2 226178536 226178575 -24509279 + (CA)n Simple_repeat Simple_repeat 2 40 0 481 211 96 0 chr2 226179156 226179260 -24508594 + MIR SINE MIR 41 154 -108 294 29 0 0 chr2 226182062 226182097 -24505757 + (GAA)n Simple_repeat Simple_repeat 2 36 0 189 321 28 19 chr2 226182420 226182526 -24505328 - L2 LINE L2 -10 3303 3197 2044 115 0 0 chr2 226182751 226183039 -24504815 + AluSc SINE Alu 1 288 -21 21 0 0 0 chr2 226183198 226183219 -24504635 + AT_rich Low_complexity Low_complexity 1 21 0 263 208 0 0 chr2 226183221 226183269 -24504585 - L1MC5 LINE L1 -399 7562 7515 1951 138 3 3 chr2 226183270 226183568 -24504286 - AluJb SINE Alu -14 298 1 212 204 41 0 chr2 226183875 226183924 -24503930 + GA-rich Low_complexity Low_complexity 2 52 0 489 293 134 26 chr2 226184588 226184820 -24503034 + MIR SINE MIR 6 262 0 413 270 99 0 chr2 226187120 226187231 -24500623 - L2 LINE L2 -1 3312 3191 1969 105 3 33 chr2 226187829 226188135 -24499719 + AluSq SINE Alu 4 300 -13 396 344 141 4 chr2 226188135 226188411 -24499443 - L3b LINE CR1 -133 1450 1137 1589 156 80 4 chr2 226188470 226188745 -24499109 + AluJb SINE Alu 1 296 -16 199 412 88 0 chr2 226189269 226189371 -24498483 + L2 LINE L2 3118 3228 -44 2111 105 7 0 chr2 226191516 226191811 -24496043 - AluSq SINE Alu -16 297 1 2045 110 10 13 chr2 226191850 226192160 -24495694 - AluSx SINE Alu -3 309 1 1073 133 6 0 chr2 226192162 226192328 -24495526 - AluSg/x SINE Alu -16 294 128 225 98 0 66 chr2 226192340 226192401 -24495453 - AluSp/q SINE Alu 0 303 247 1125 111 28 22 chr2 226192567 226192701 -24495153 + AluJb SINE Alu 3 140 -172 2262 71 3 3 chr2 226192701 226192998 -24494856 + AluY SINE Alu 2 298 -13 1125 111 28 22 chr2 226192998 226193044 -24494810 + AluJb SINE Alu 140 184 -128 469 86 0 0 chr2 226193045 226193140 -24494714 + AluJ/FRAM SINE Alu 224 318 0 1564 158 21 14 chr2 226193164 226193455 -24494399 + AluJb SINE Alu 5 297 -15 208 175 219 53 chr2 226193487 226193601 -24494253 - MIR3 SINE MIR -73 135 3 180 0 0 0 chr2 226194472 226194492 -24493362 + (CCGAG)n Simple_repeat Simple_repeat 2 21 0 28 0 0 0 chr2 226194638 226194666 -24493188 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 226194706 226194728 -24493126 + GC_rich Low_complexity Low_complexity 1 22 0 24 103 0 0 chr2 226195248 226195335 -24492519 + AT_rich Low_complexity Low_complexity 1 87 0 27 81 0 0 chr2 226195360 226195422 -24492432 + AT_rich Low_complexity Low_complexity 1 62 0 22 56 0 0 chr2 226195481 226195517 -24492337 + AT_rich Low_complexity Low_complexity 1 36 0 376 155 0 103 chr2 226195629 226195726 -24492128 - MER20 DNA MER1_type 0 219 133 987 158 5 39 chr2 226195747 226195947 -24491907 - AluJo SINE Alu 0 310 116 1892 60 0 19 chr2 226195947 226196215 -24491639 - L1MA2 LINE L1 0 6304 6042 987 158 5 39 chr2 226196215 226196244 -24491610 - AluJo SINE Alu -194 116 88 284 194 194 40 chr2 226196247 226196371 -24491483 - MER20 DNA MER1_type -76 143 1 315 0 0 0 chr2 226196979 226197014 -24490840 + (TG)n Simple_repeat Simple_repeat 2 36 0 416 216 78 39 chr2 226197060 226197162 -24490692 + L2 LINE L2 3163 3268 -4 1552 174 7 37 chr2 226197502 226197657 -24490197 - AluJo SINE Alu -24 288 145 2203 98 3 0 chr2 226197657 226197954 -24489900 - AluSp SINE Alu -15 298 1 1552 174 7 37 chr2 226197954 226198092 -24489762 - AluJo SINE Alu -167 145 4 284 59 0 0 chr2 226198092 226198126 -24489728 + THE1C LTR MaLR 1 34 -341 299 226 0 0 chr2 226198130 226198183 -24489671 + MLT1A1 LTR MaLR 83 135 -230 792 113 0 5 chr2 226198185 226198395 -24489459 + AluSx SINE Alu 2 308 -4 611 63 0 13 chr2 226198396 226198475 -24489379 + AluS SINE Alu 2 79 -234 1968 113 0 11 chr2 226198805 226199147 -24488707 + AluSx SINE Alu 6 344 0 2059 84 11 0 chr2 226199298 226199571 -24488283 - AluSx SINE Alu -12 300 25 2021 112 0 23 chr2 226199571 226199875 -24487979 - AluSx SINE Alu -15 297 1 1807 149 14 3 chr2 226199890 226200185 -24487669 - AluSx SINE Alu -14 298 1 215 320 206 50 chr2 226200256 226200606 -24487248 - L2 LINE L2 -578 2736 2442 2479 130 61 12 chr2 226200606 226200917 -24486937 - MSTC LTR MaLR 0 428 91 2078 120 3 0 chr2 226200917 226201216 -24486638 - AluSx SINE Alu -12 300 1 2479 130 61 12 chr2 226201216 226201312 -24486542 - MSTC LTR MaLR -337 91 1 215 320 206 50 chr2 226201312 226201518 -24486336 - L2 LINE L2 -872 2442 2093 1385 135 13 0 chr2 226201518 226201747 -24486107 - AluSg SINE Alu -34 276 45 2020 90 32 0 chr2 226201998 226202275 -24485579 - AluSg SINE Alu -20 290 5 4945 126 109 117 chr2 226202565 226204105 -24483749 + pTR5 LTR ERV1 738 2438 0 1343 168 4 4 chr2 226204406 226204632 -24483222 - AluJb SINE Alu -3 309 84 781 308 41 62 chr2 226204634 226204856 -24482998 - L2 LINE L2 -1 3312 3087 1833 168 4 0 chr2 226204856 226205136 -24482718 + AluJo SINE Alu 1 281 -31 422 18 18 0 chr2 226205139 226205194 -24482660 + (TAAAA)n Simple_repeat Simple_repeat 2 57 0 1970 173 0 3 chr2 226205194 226205500 -24482354 + AluJo SINE Alu 2 306 -6 781 308 41 62 chr2 226205500 226205541 -24482313 - L2 LINE L2 -227 3086 3046 2250 111 7 0 chr2 226205541 226205838 -24482016 - AluSq SINE Alu -14 299 1 781 308 41 62 chr2 226205838 226206131 -24481723 - L2 LINE L2 -267 3046 2763 182 319 121 0 chr2 226206703 226206794 -24481060 - L2 LINE L2 -32 3281 3180 2205 115 3 0 chr2 226206831 226207118 -24480736 + AluSx SINE Alu 1 288 -24 621 301 86 55 chr2 226210097 226210701 -24477153 - L2 LINE L2 -13 3259 2681 1735 209 53 45 chr2 226211435 226211521 -24476333 - MER44D DNA MER2_type -1979 508 424 2241 119 0 0 chr2 226211521 226211815 -24476039 + AluSx SINE Alu 15 308 -4 1735 209 53 45 chr2 226211815 226212177 -24475677 - MER44D DNA MER2_type -2063 424 1 948 275 39 7 chr2 226212177 226212457 -24475397 - L2 LINE L2 -2041 1273 985 207 393 21 29 chr2 226212514 226212654 -24475200 + MIR SINE MIR 57 195 -67 2345 107 0 0 chr2 226212683 226212981 -24474873 + AluSx SINE Alu 1 298 -14 721 263 78 17 chr2 226214506 226214738 -24473116 + MIR SINE MIR 2 247 -15 2156 92 44 10 chr2 226214898 226215192 -24472662 - AluSc SINE Alu -5 304 1 2336 100 13 3 chr2 226215198 226215507 -24472347 - AluSx SINE Alu 0 312 1 288 268 158 18 chr2 226215555 226215719 -24472135 - HAL1 LINE L1 -1530 977 791 1055 290 169 35 chr2 226215740 226216402 -24471452 - HAL1 LINE L1 -1748 759 9 272 316 0 0 chr2 226216694 226216773 -24471081 - MER112 DNA MER1_type -181 79 1 2149 107 21 0 chr2 226216848 226217138 -24470716 + AluSq SINE Alu 1 296 -17 21 0 0 0 chr2 226217138 226217159 -24470695 + AT_rich Low_complexity Low_complexity 1 21 0 1410 168 88 4 chr2 226217304 226217578 -24470276 + AluJb SINE Alu 5 301 -11 2075 125 17 0 chr2 226220260 226220557 -24467297 + AluSx SINE Alu 11 312 0 1539 219 124 27 chr2 226220620 226221168 -24466686 - MER20B DNA MER1_type -167 616 16 1596 194 30 16 chr2 226223552 226223856 -24463998 - AluJo SINE Alu 0 312 5 260 313 25 0 chr2 226224219 226224299 -24463555 - MIR SINE MIR -4 258 177 1655 119 4 0 chr2 226225102 226225329 -24462525 + AluSg/x SINE Alu 67 294 -18 1235 156 38 25 chr2 226225330 226225567 -24462287 + MLT1A1 LTR MaLR 126 365 0 418 200 50 20 chr2 226225597 226225697 -24462157 - MLT1F1 LTR MaLR 0 567 465 2355 79 14 0 chr2 226225702 226225993 -24461861 + AluSg SINE Alu 1 295 -15 371 136 0 0 chr2 226225993 226226052 -24461802 - MLT1F1 LTR MaLR -508 59 1 23 33 0 0 chr2 226226100 226226130 -24461724 + AT_rich Low_complexity Low_complexity 1 30 0 737 154 0 0 chr2 226226201 226226311 -24461543 + FRAM SINE Alu 45 154 -22 1627 146 85 48 chr2 226226313 226226607 -24461247 + AluJb SINE Alu 1 305 -7 508 297 57 0 chr2 226226608 226226783 -24461071 - MIR SINE MIR -2 260 76 2179 110 20 7 chr2 226226880 226227181 -24460673 - AluSg SINE Alu -5 305 1 957 172 0 0 chr2 226227500 226227670 -24460184 + FRAM SINE Alu 6 175 0 1888 80 0 4 chr2 226228046 226228283 -24459571 - AluY SINE Alu -22 289 54 360 239 69 88 chr2 226228585 226228670 -24459184 + MIR SINE MIR 86 168 -94 2674 65 0 0 chr2 226228670 226228979 -24458875 - AluY SINE Alu -2 309 1 360 239 69 88 chr2 226228979 226229052 -24458802 + MIR SINE MIR 168 241 -21 1152 126 0 0 chr2 226229117 226229268 -24458586 - AluSq/x SINE Alu -161 151 1 2502 138 13 62 chr2 226229937 226229993 -24457861 + MSTB LTR MaLR 1 58 -368 2597 72 0 0 chr2 226229993 226230299 -24457555 + AluY SINE Alu 6 311 0 2502 138 13 62 chr2 226230299 226230649 -24457205 + MSTB LTR MaLR 58 386 -40 1739 180 10 20 chr2 226230649 226230949 -24456905 - AluJo SINE Alu -14 298 2 2502 138 13 62 chr2 226230949 226230989 -24456865 + MSTB LTR MaLR 386 426 0 789 135 40 0 chr2 226231165 226231291 -24456563 - FLAM_C SINE Alu 0 133 3 2283 89 10 3 chr2 226231481 226231772 -24456082 + AluSg SINE Alu 1 293 -17 1005 150 22 61 chr2 226231779 226231959 -24455895 + AluJo SINE Alu 1 173 -139 352 253 66 11 chr2 226232045 226232136 -24455718 + MER5A DNA MER1_type 92 187 -2 207 315 43 22 chr2 226232136 226232216 -24455638 - L2 LINE L2 -35 3237 3156 439 277 61 20 chr2 226234647 226234795 -24453059 + MIR SINE MIR 79 232 -30 614 203 0 31 chr2 226237260 226237388 -24450466 + MER5C DNA MER1_type 1 124 -200 1868 166 0 10 chr2 226239962 226240269 -24447585 + AluJo SINE Alu 1 304 -8 187 364 85 8 chr2 226241081 226241210 -24446644 + MIR SINE MIR 2 140 -122 2182 121 23 0 chr2 226244112 226244417 -24443437 + AluSx SINE Alu 1 312 0 278 250 25 8 chr2 226247200 226247320 -24440534 + (CTGGGG)n Simple_repeat Simple_repeat 2 123 0 180 317 59 30 chr2 226247908 226248009 -24439845 - L2 LINE L2 -1 3271 3168 749 256 43 13 chr2 226248091 226248321 -24439533 + MIR SINE MIR 13 249 -13 180 0 0 0 chr2 226251637 226251657 -24436197 + (CCTG)n Simple_repeat Simple_repeat 4 23 0 479 260 170 20 chr2 226252813 226253013 -24434841 - MIR SINE MIR 0 262 33 2408 101 0 16 chr2 226253680 226253997 -24433857 - AluSx SINE Alu 0 312 1 761 277 119 33 chr2 226254139 226254568 -24433286 + L3 LINE CR1 807 1272 -305 286 253 163 62 chr2 226254930 226255108 -24432746 + L2 LINE L2 3118 3313 0 408 266 72 123 chr2 226255751 226256319 -24431535 + LTR67 LTR ERVL 19 557 0 385 233 107 9 chr2 226256522 226256735 -24431119 + L1MC/D LINE L1 5200 5432 -743 2209 102 17 14 chr2 226256739 226257034 -24430820 + AluSq SINE Alu 1 296 -17 597 289 61 8 chr2 226257292 226257538 -24430316 + MIR SINE MIR 2 260 -2 1963 134 21 0 chr2 226257570 226257860 -24429994 + AluSx SINE Alu 1 296 -16 33 0 0 0 chr2 226259673 226259706 -24428148 + GC_rich Low_complexity Low_complexity 1 33 0 29 0 0 0 chr2 226259739 226259768 -24428086 + GC_rich Low_complexity Low_complexity 1 29 0 228 35 0 0 chr2 226259908 226259937 -24427917 + (CTCGG)n Simple_repeat Simple_repeat 5 33 0 2241 92 14 0 chr2 226261086 226261369 -24426485 - AluSx SINE Alu -20 292 6 2460 93 0 6 chr2 226261716 226262029 -24425825 - AluY SINE Alu 0 311 1 219 288 273 14 chr2 226263206 226263345 -24424509 + MIR SINE MIR 32 206 -56 2348 105 0 3 chr2 226267096 226267401 -24420453 - AluSx SINE Alu -8 304 1 2318 90 7 7 chr2 226270797 226271098 -24416756 + AluSq SINE Alu 1 301 -12 2040 121 10 10 chr2 226271134 226271431 -24416423 + AluSx SINE Alu 1 297 -15 2500 76 3 0 chr2 226271435 226271738 -24416116 + AluY SINE Alu 2 305 -6 189 0 0 0 chr2 226271748 226271769 -24416085 + (TG)n Simple_repeat Simple_repeat 2 22 0 236 87 0 0 chr2 226271769 226271815 -24416039 + LTR66 LTR ERVL 394 439 -171 1456 235 57 39 chr2 226271886 226272324 -24415530 - L2 LINE L2 -358 2956 2511 1976 141 0 13 chr2 226272324 226272623 -24415231 - AluSx SINE Alu -17 295 1 243 348 104 9 chr2 226272640 226272755 -24415099 + L2 LINE L2 3137 3262 -10 551 207 146 67 chr2 226274093 226274159 -24413695 + MER5A DNA MER1_type 10 69 -120 2326 104 7 0 chr2 226274159 226274337 -24413517 + AluSx SINE Alu 1 183 -129 330 26 0 0 chr2 226274337 226274376 -24413478 + (TGGGGG)n Simple_repeat Simple_repeat 4 42 0 2326 104 7 0 chr2 226274376 226274506 -24413348 + AluSx SINE Alu 183 311 -1 551 207 146 67 chr2 226274506 226274603 -24413251 + MER5A DNA MER1_type 69 186 -3 312 250 185 0 chr2 226274606 226274714 -24413140 + L2 LINE L2 3145 3272 0 692 221 107 33 chr2 226275027 226275271 -24412583 - MIR SINE MIR 0 262 1 474 279 7 7 chr2 226275271 226275407 -24412447 - MIR SINE MIR -114 148 13 404 283 234 0 chr2 226276548 226276753 -24411101 + MIR SINE MIR 10 262 0 286 256 99 32 chr2 226284980 226285111 -24402743 + MIR3 SINE MIR 15 153 -67 1594 170 6 58 chr2 226285355 226285547 -24402307 - AluJo SINE Alu 0 312 142 2127 123 20 0 chr2 226285547 226285849 -24402005 - AluSp SINE Alu -5 308 1 1594 170 6 58 chr2 226285849 226285985 -24401869 - AluJo SINE Alu -170 142 1 218 259 139 56 chr2 226286461 226286569 -24401285 + MIR SINE MIR 88 204 -58 320 353 53 27 chr2 226286634 226286784 -24401070 + L2 LINE L2 3115 3268 -4 1212 116 19 42 chr2 226286799 226287014 -24400840 + MLT1D LTR MaLR 3 212 -293 864 157 15 0 chr2 226287020 226287154 -24400700 + AluJo SINE Alu 1 136 -176 920 221 20 0 chr2 226287161 226287356 -24400498 + MLT1D LTR MaLR 210 408 -97 2372 84 14 0 chr2 226287357 226287654 -24400200 - AluY SINE Alu -10 301 1 189 0 0 0 chr2 226287654 226287675 -24400179 + (T)n Simple_repeat Simple_repeat 1 21 0 2230 67 11 11 chr2 226287694 226287977 -24399877 + AluSq SINE Alu 21 303 -10 2214 118 0 7 chr2 226288242 226288538 -24399316 + AluSx SINE Alu 1 294 -18 635 139 0 19 chr2 226288623 226288731 -24399123 + FLAM_C SINE Alu 12 117 -26 186 43 0 0 chr2 226288737 226288760 -24399094 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2257 123 0 0 chr2 226289201 226289501 -24398353 - AluSx SINE Alu -6 306 7 2221 134 0 0 chr2 226289516 226289821 -24398033 - AluSx SINE Alu -7 305 1 37 39 0 0 chr2 226289863 226289914 -24397940 + AT_rich Low_complexity Low_complexity 1 51 0 246 32 0 0 chr2 226290489 226290520 -24397334 + (A)n Simple_repeat Simple_repeat 1 31 0 776 214 24 121 chr2 226291434 226291766 -24396088 - L2 LINE L2 -1 3312 3013 1792 166 113 101 chr2 226291802 226291998 -24395856 + MLT1F1 LTR MaLR 14 206 -361 2388 106 3 0 chr2 226291998 226292300 -24395554 - AluSx SINE Alu -4 308 6 1792 166 113 101 chr2 226292300 226292588 -24395266 + MLT1F1 LTR MaLR 206 508 -59 2431 91 0 10 chr2 226292588 226292897 -24394957 - AluY SINE Alu -5 306 1 1792 166 113 101 chr2 226292897 226292958 -24394896 + MLT1F1 LTR MaLR 508 567 0 2360 235 54 49 chr2 226292958 226293784 -24394070 - L2 LINE L2 -298 3015 2163 967 357 70 32 chr2 226293791 226294016 -24393838 - L2 LINE L2 -494 2820 2605 2191 109 3 3 chr2 226294016 226294309 -24393545 + AluSx SINE Alu 1 293 -19 967 357 70 32 chr2 226294309 226294812 -24393042 - L2 LINE L2 -709 2605 2064 294 73 0 0 chr2 226295126 226295167 -24392687 + (GAGAA)n Simple_repeat Simple_repeat 5 45 0 440 291 44 48 chr2 226296378 226296584 -24391270 + MIR3 SINE MIR 1 205 -3 1914 129 0 0 chr2 226296833 226297089 -24390765 + AluSx SINE Alu 1 256 -56 295 335 77 21 chr2 226297167 226297361 -24390493 - L2 LINE L2 -4 3309 3105 2019 144 0 14 chr2 226297847 226298165 -24389689 + AluSx SINE Alu 1 314 0 222 286 22 0 chr2 226298409 226298500 -24389354 - L2 LINE L2 -87 3226 3134 2559 74 7 0 chr2 226298566 226298876 -24388978 + AluSp SINE Alu 1 312 -1 2315 105 0 7 chr2 226300112 226300416 -24387438 + AluSx SINE Alu 1 302 -10 1944 161 0 0 chr2 226300896 226301181 -24386673 + AluSx SINE Alu 6 290 -22 1729 182 3 19 chr2 226301196 226301503 -24386351 + AluJb SINE Alu 11 312 0 2401 85 3 0 chr2 226301803 226302097 -24385757 - AluSq SINE Alu -18 295 1 1904 152 0 0 chr2 226302260 226302551 -24385303 + AluJb SINE Alu 14 304 0 1191 174 27 5 chr2 226302658 226302877 -24384977 - MER58A DNA MER1_type 0 224 1 2053 159 0 13 chr2 226303452 226303588 -24384266 + AluSx SINE Alu 1 137 -175 2433 98 0 0 chr2 226303588 226303893 -24383961 + AluSx SINE Alu 1 305 -7 2053 159 0 13 chr2 226303893 226304065 -24383789 + AluSx SINE Alu 137 305 -7 1856 133 0 4 chr2 226304627 226304883 -24382971 + AluSx SINE Alu 29 307 0 196 42 0 0 chr2 226304883 226304907 -24382947 + (TAA)n Simple_repeat Simple_repeat 2 180 0 972 173 5 49 chr2 226305286 226305471 -24382383 - AluJo SINE Alu -133 179 3 402 19 38 0 chr2 226305478 226305531 -24382323 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2218 90 18 0 chr2 226305531 226305809 -24382045 - AluSx SINE Alu -29 283 1 338 314 88 34 chr2 226305867 226306071 -24381783 - MIR SINE MIR -28 234 20 678 239 0 0 chr2 226306265 226306399 -24381455 + FLAM_C SINE Alu 2 135 -8 454 252 88 129 chr2 226306519 226306975 -24380879 + L1MC4 LINE L1 5494 5930 -1878 229 238 0 16 chr2 226306975 226307038 -24380816 + (TA)n Simple_repeat Simple_repeat 1 62 0 366 133 49 14 chr2 226307554 226307697 -24380157 + (TTATA)n Simple_repeat Simple_repeat 3 150 0 672 148 0 17 chr2 226308002 226308117 -24379737 + FLAM_C SINE Alu 14 126 -17 183 114 0 0 chr2 226308119 226308154 -24379700 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 28 29 0 0 chr2 226308154 226308189 -24379665 + AT_rich Low_complexity Low_complexity 1 35 0 2379 72 10 10 chr2 226308347 226308653 -24379201 + AluY SINE Alu 1 306 -5 2312 75 4 4 chr2 226308674 226308986 -24378868 + AluY SINE Alu 1 312 0 448 294 112 10 chr2 226309299 226309496 -24378358 + MIR SINE MIR 29 245 -17 272 364 78 0 chr2 226309491 226309620 -24378234 + L2 LINE L2 2667 2805 -509 * 209 347 161 12 chr2 226309738 226309980 -24377874 + L2 LINE L2 2994 3271 -1 192 77 0 0 chr2 226310799 226310825 -24377029 + (TC)n Simple_repeat Simple_repeat 2 27 0 432 0 0 0 chr2 226310825 226310873 -24376981 + (CA)n Simple_repeat Simple_repeat 1 48 0 232 246 31 15 chr2 226311815 226311880 -24375974 + Charlie4 DNA MER1_type 1892 1957 -4 440 259 0 69 chr2 226312313 226312444 -24375410 + L1MC4 LINE L1 6582 6703 -1339 213 235 139 78 chr2 226313823 226313989 -24373865 + MIR3 SINE MIR 10 185 -23 182 276 235 20 chr2 226314377 226314475 -24373379 + L2 LINE L2 3192 3310 -3 1013 141 41 77 chr2 226315548 226315768 -24372086 - MER20 DNA MER1_type -2 217 6 204 309 51 51 chr2 226315818 226315996 -24371858 + L2 LINE L2 2919 3096 -176 186 178 133 0 chr2 226316060 226316105 -24371749 + L2 LINE L2 3263 3313 0 2296 95 0 29 chr2 226316508 226316824 -24371030 - AluSx SINE Alu 0 312 6 312 27 0 0 chr2 226316922 226316959 -24370895 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 326 308 39 15 chr2 226317213 226317343 -24370511 + L2 LINE L2 2974 3106 -207 297 239 0 0 chr2 226317901 226318018 -24369836 + G-rich Low_complexity Low_complexity 1 117 0 2195 114 3 0 chr2 226318597 226318887 -24368967 - AluSx SINE Alu -21 291 1 244 336 52 33 chr2 226321240 226321451 -24366403 + L1MC4a LINE L1 5719 5933 -1875 1865 149 7 7 chr2 226321525 226321814 -24366040 + AluSx SINE Alu 1 289 -23 2173 112 28 0 chr2 226323142 226323427 -24364427 + AluSx SINE Alu 1 293 -19 2455 85 0 0 chr2 226323429 226323724 -24364130 + AluSc SINE Alu 1 295 -14 1060 277 70 21 chr2 226327578 226328004 -24359850 - L2 LINE L2 0 3313 2867 197 240 120 0 chr2 226328002 226328077 -24359777 - MIR SINE MIR -171 91 8 * 2676 37 0 3 chr2 226329133 226329433 -24358421 - AluY SINE Alu -12 299 1 515 262 42 36 chr2 226329433 226329592 -24358262 + MER91A DNA MER1_type 24 186 -10 1381 97 11 0 chr2 226332162 226332338 -24355516 - AluSg/x SINE Alu -16 296 119 327 214 0 26 chr2 226332338 226332422 -24355432 - AluJ/monomer SINE Alu -252 47 1 1316 103 0 17 chr2 226332448 226332622 -24355232 + AluSx SINE Alu 1 171 -141 604 119 37 0 chr2 226332858 226332967 -24354887 + AluSp/q SINE Alu 181 293 -20 626 202 8 0 chr2 226332990 226333114 -24354740 - FLAM_C SINE Alu -14 129 5 2116 117 16 23 chr2 226333124 226333431 -24354423 - AluSx SINE Alu -7 305 1 222 0 25 50 chr2 226333434 226333474 -24354380 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1714 160 3 31 chr2 226333476 226333769 -24354085 - AluJb SINE Alu -27 285 1 524 213 0 0 chr2 226333774 226333882 -24353972 + MLT1D LTR MaLR 397 504 -1 236 284 62 25 chr2 226333882 226333959 -24353895 + Charlie8 DNA MER1_type 186 265 -2152 2059 111 34 3 chr2 226334139 226334264 -24353590 + AluSq SINE Alu 1 121 -192 423 0 0 0 chr2 226334264 226334311 -24353543 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 2059 111 34 3 chr2 226334311 226334483 -24353371 + AluSq SINE Alu 121 307 -6 243 61 0 0 chr2 226334525 226334558 -24353296 + (TG)n Simple_repeat Simple_repeat 2 34 0 545 309 101 15 chr2 226335033 226335360 -24352494 + L2 LINE L2 1825 2179 -1135 381 189 142 28 chr2 226335368 226335474 -24352380 + L1MC5 LINE L1 7837 7954 -7 21 57 0 0 chr2 226335489 226335524 -24352330 + AT_rich Low_complexity Low_complexity 1 35 0 749 236 30 86 chr2 226335575 226335831 -24352023 + L2 LINE L2 2207 2476 -838 2190 87 18 0 chr2 226335831 226336107 -24351747 + AluSq SINE Alu 1 281 -32 255 31 0 0 chr2 226336107 226336139 -24351715 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 749 236 30 86 chr2 226336139 226336182 -24351672 + L2 LINE L2 2474 2490 -824 1135 277 138 14 chr2 226336195 226336696 -24351158 - MLT1L LTR MaLR -6 609 47 509 289 188 45 chr2 226336769 226337169 -24350685 + L2 LINE L2 2543 2884 -429 2346 57 0 14 chr2 226337169 226337448 -24350406 + AluY SINE Alu 1 275 -36 509 289 188 45 chr2 226337448 226337462 -24350392 + L2 LINE L2 2884 2895 -418 252 0 0 0 chr2 226337462 226337490 -24350364 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 509 289 188 45 chr2 226337490 226337650 -24350204 + L2 LINE L2 2895 3207 -106 1277 154 5 45 chr2 226337650 226337871 -24349983 - AluJb SINE Alu -16 296 85 2267 90 0 0 chr2 226337899 226338178 -24349676 + AluSq SINE Alu 2 280 -33 363 247 52 0 chr2 226338209 226338286 -24349568 + L2 LINE L2 3191 3271 -1 1734 138 0 0 chr2 226338350 226338589 -24349265 + AluSx SINE Alu 1 239 -73 956 258 63 17 chr2 226339132 226339153 -24348701 - L2 LINE L2 -2014 1300 1281 2406 197 55 13 chr2 226339153 226339318 -24348536 - MER44D DNA MER2_type -1882 605 448 2331 123 0 0 chr2 226339318 226339626 -24348228 + AluSx SINE Alu 1 308 -4 2406 197 55 13 chr2 226339626 226339988 -24347866 - MER44D DNA MER2_type -2039 448 1 956 258 63 17 chr2 226339988 226340268 -24347586 - L2 LINE L2 -2033 1281 985 215 386 38 25 chr2 226340308 226340466 -24347388 + MIR SINE MIR 36 195 -67 2345 107 0 0 chr2 226340495 226340793 -24347061 + AluSx SINE Alu 1 298 -14 721 263 78 17 chr2 226342318 226342550 -24345304 + MIR SINE MIR 2 247 -15 2302 92 38 0 chr2 226342710 226343003 -24344851 - AluSc SINE Alu -5 304 1 2214 105 48 0 chr2 226343242 226343536 -24344318 - AluSx SINE Alu -4 308 1 459 319 58 11 chr2 226343599 226343787 -24344067 - MIR SINE MIR -8 254 58 1920 160 3 16 chr2 226343954 226344261 -24343593 + AluJo SINE Alu 1 303 -9 2234 111 10 0 chr2 226348675 226348973 -24338881 - AluSq SINE Alu -12 301 1 817 147 0 0 chr2 226349094 226349223 -24338631 + AluSg/x SINE Alu 183 311 -1 904 134 0 0 chr2 226349238 226349357 -24338497 - AluJb SINE Alu -188 124 6 239 204 0 0 chr2 226349475 226349519 -24338335 - MIR SINE MIR -3 259 216 247 256 145 34 chr2 226349556 226349673 -24338181 + L2 LINE L2 3179 3308 -5 * 328 200 214 15 chr2 226349667 226349775 -24338079 - MIR SINE MIR -44 164 40 840 254 134 32 chr2 226350901 226350955 -24336899 - L1MC4a LINE L1 -114 6007 5960 1819 132 39 28 chr2 226350955 226351157 -24336697 - MER46B DNA MER2_type -2496 235 150 2046 99 7 63 chr2 226351157 226351488 -24336366 - AluSq SINE Alu 0 314 1 1819 132 39 28 chr2 226351488 226351640 -24336214 - MER46B DNA MER2_type -2581 150 1 840 254 134 32 chr2 226351640 226351963 -24335891 - L1MC4a LINE L1 -161 5960 5589 1269 102 6 0 chr2 226351983 226352150 -24335704 + AluSp SINE Alu 137 304 -9 1012 114 0 0 chr2 226352300 226352432 -24335422 + AluJb SINE Alu 3 134 -178 504 272 98 11 chr2 226353016 226353200 -24334654 - MER58C DNA MER1_type -6 209 10 2079 104 0 4 chr2 226355485 226355763 -24332091 + AluSq SINE Alu 27 303 -10 205 254 0 32 chr2 226356443 226356506 -24331348 + CT-rich Low_complexity Low_complexity 5 65 0 193 337 11 45 chr2 226356557 226356646 -24331208 + MIR SINE MIR 46 131 -77 237 132 0 0 chr2 226356826 226356864 -24330990 + (A)n Simple_repeat Simple_repeat 1 38 0 829 252 183 21 chr2 226357685 226357975 -24329879 - MLT1J LTR MaLR -174 337 1 430 255 54 0 chr2 226358659 226358808 -24329046 + MER117 DNA MER1_type 41 197 0 654 249 132 5 chr2 226359195 226359400 -24328454 + MIR SINE MIR 8 238 -24 209 196 20 0 chr2 226359552 226359603 -24328251 + (TATG)n Simple_repeat Simple_repeat 3 54 0 1437 148 70 4 chr2 226359647 226359890 -24327964 - Tigger3(Golem) DNA MER2_type -2 3027 2769 2024 118 12 43 chr2 226359892 226360214 -24327640 + AluSx SINE Alu 1 312 0 589 88 22 0 chr2 226360329 226360420 -24327434 - AluS SINE Alu -219 94 2 796 239 39 0 chr2 226360421 226360651 -24327203 - L1M4 LINE L1 -2120 4026 3788 1725 95 9 0 chr2 226360656 226360878 -24326976 + AluSq SINE Alu 84 307 -6 684 261 139 65 chr2 226360883 226361049 -24326805 - L1M4 LINE L1 -1272 4874 4722 634 221 0 0 chr2 226361049 226361171 -24326683 - FLAM_A SINE Alu -11 122 1 684 261 139 65 chr2 226361171 226361391 -24326463 - L1M4 LINE L1 -1424 4722 4520 2266 112 3 0 chr2 226361391 226361677 -24326177 + AluSx SINE Alu 1 287 -25 387 0 0 0 chr2 226361677 226361720 -24326134 + (CA)n Simple_repeat Simple_repeat 2 44 0 684 261 139 65 chr2 226361720 226361897 -24325957 - L1M4 LINE L1 -1626 4520 4358 2185 120 0 3 chr2 226361897 226362197 -24325657 + AluSc SINE Alu 1 299 -10 684 261 139 65 chr2 226362197 226362369 -24325485 - L1M4 LINE L1 -1788 4358 4081 1527 224 65 13 chr2 226362391 226362855 -24324999 - LTR16C LTR ERVL -3 488 1 1711 157 39 14 chr2 226363002 226363288 -24324566 + AluJb SINE Alu 2 294 -18 261 0 0 0 chr2 226363290 226363319 -24324535 + (CA)n Simple_repeat Simple_repeat 2 30 0 470 318 0 0 chr2 226363365 226363494 -24324360 - HERV16 LTR ERVL -3558 1438 1310 206 174 22 0 chr2 226363644 226363690 -24324164 + GA-rich Low_complexity Low_complexity 3 49 0 1846 101 4 12 chr2 226363698 226363946 -24323908 + AluSx SINE Alu 1 246 -66 326 259 135 33 chr2 226364046 226364323 -24323531 - L2 LINE L2 -269 3044 2736 380 206 323 0 chr2 226364341 226364496 -24323358 - L1ME4a LINE L1 -16 6105 5901 2004 145 7 16 chr2 226364548 226364858 -24322996 - AluJo SINE Alu -5 307 1 299 377 7 0 chr2 226364895 226365049 -24322805 - L1MC4 LINE L1 -293 7749 7595 300 235 69 0 chr2 226365088 226365190 -24322664 - L1MC5 LINE L1 -542 7419 7311 2336 115 0 13 chr2 226365194 226365508 -24322346 - AluSx SINE Alu -2 310 1 255 270 154 91 chr2 226365734 226365984 -24321870 - L1MC5 LINE L1 -746 7215 6982 2137 142 0 0 chr2 226365984 226366294 -24321560 - AluSx SINE Alu -2 310 1 255 270 154 91 chr2 226366294 226366645 -24321209 - L1MC5 LINE L1 -979 6982 6589 2084 142 23 0 chr2 226366645 226366948 -24320906 + AluSx SINE Alu 1 310 -2 255 270 154 91 chr2 226366948 226367136 -24320718 - L1MC5 LINE L1 -1372 6589 6414 222 318 40 48 chr2 226367195 226367321 -24320533 - L2 LINE L2 -572 2742 2618 605 203 53 0 chr2 226367799 226367932 -24319922 + FLAM_C SINE Alu 2 141 -2 1981 128 7 24 chr2 226368835 226369132 -24318722 + AluSx SINE Alu 1 292 -20 2333 105 10 0 chr2 226369132 226369437 -24318417 + AluSp SINE Alu 1 308 -5 354 247 16 54 chr2 226369659 226369895 -24317959 + (CCCCG)n Simple_repeat Simple_repeat 1 227 0 471 321 71 36 chr2 226370129 226370353 -24317501 - MIR SINE MIR -3 259 28 214 197 28 70 chr2 226370431 226370502 -24317352 - MIR SINE MIR -86 122 54 2445 82 0 10 chr2 226370910 226371214 -24316640 + AluSx SINE Alu 1 301 -11 312 224 11 11 chr2 226371444 226371554 -24316300 + AluJ/monomer SINE Alu 2 46 -256 246 270 31 68 chr2 226371871 226371936 -24315918 + L1MC/D LINE L1 5370 5436 -2372 1889 120 88 7 chr2 226371936 226372220 -24315634 + AluSg SINE Alu 1 307 -3 246 270 31 68 chr2 226372220 226372317 -24315537 + L1MC/D LINE L1 5436 5526 -2282 1235 194 214 6 chr2 226372317 226372677 -24315177 + LTR47A LTR ERVL 3 437 -15 1636 189 40 11 chr2 226372686 226373036 -24314818 + MER63 DNA MER1_type 702 1061 -1 413 296 170 0 chr2 226373061 226373196 -24314658 + MER5A DNA MER1_type 9 166 -23 22 35 0 0 chr2 226373695 226373724 -24314130 + GC_rich Low_complexity Low_complexity 1 29 0 242 167 37 0 chr2 226374377 226374431 -24313423 + C-rich Low_complexity Low_complexity 1 56 0 587 209 186 17 chr2 226375150 226375327 -24312527 - MIR SINE MIR -19 243 37 419 318 112 14 chr2 226375331 226375608 -24312246 - L2 LINE L2 0 3313 3010 591 242 15 0 chr2 226375631 226375763 -24312091 - MIR SINE MIR -5 257 124 362 221 206 0 chr2 226376639 226376770 -24311084 - MIR SINE MIR -44 218 61 449 286 11 69 chr2 226378228 226378328 -24309526 - MIR SINE MIR -23 239 154 1859 147 63 3 chr2 226378328 226378614 -24309240 - AluJb SINE Alu -9 303 1 449 286 11 69 chr2 226378614 226378702 -24309152 - MIR SINE MIR -108 154 62 1409 145 26 134 chr2 226381467 226381818 -24306036 + AluYb8 SINE Alu 1 313 -5 511 191 57 113 chr2 226382479 226382613 -24305241 + MER113 DNA MER1_type? 1 118 -403 2195 125 0 0 chr2 226382613 226382910 -24304944 - AluSx SINE Alu -15 297 1 511 191 57 113 chr2 226382910 226383005 -24304849 + MER113 DNA MER1_type? 118 217 -304 348 43 0 0 chr2 226384140 226384186 -24303668 + (CA)n Simple_repeat Simple_repeat 2 47 0 1891 137 22 4 chr2 226384337 226384614 -24303240 + AluJb SINE Alu 1 282 -30 454 262 6 104 chr2 226384680 226384863 -24302991 + MIR SINE MIR 98 262 0 189 245 19 0 chr2 226384949 226385002 -24302852 + L2 LINE L2 2551 2604 -710 732 173 23 15 chr2 226385012 226385145 -24302709 - AluJo SINE Alu -178 134 1 632 278 109 18 chr2 226385286 226385570 -24302284 + L2 LINE L2 2645 2954 -360 428 306 16 57 chr2 226385645 226385691 -24302163 + L2 LINE L2 3110 3156 -157 2130 126 10 3 chr2 226385691 226386015 -24301839 - AluSq SINE Alu 0 313 4 428 306 16 57 chr2 226386015 226386161 -24301693 + L2 LINE L2 3156 3294 -19 246 244 183 12 chr2 226386199 226386281 -24301573 + MIR SINE MIR 113 208 -54 2463 98 0 0 chr2 226386707 226387013 -24300841 + AluSg SINE Alu 1 306 -4 229 274 7 7 chr2 226387128 226387274 -24300580 + (TG)n Simple_repeat Simple_repeat 1 146 0 216 235 0 29 chr2 226387278 226387346 -24300508 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 2827 177 21 23 chr2 226387401 226387931 -24299923 - MLT1F LTR MaLR -13 529 1 185 247 12 0 chr2 226387935 226388016 -24299838 + (TG)n Simple_repeat Simple_repeat 2 83 0 * 262 235 8 8 chr2 226388003 226388122 -24299732 + (TATATG)n Simple_repeat Simple_repeat 2 120 0 461 241 25 25 chr2 226388148 226388310 -24299544 + (TATG)n Simple_repeat Simple_repeat 4 165 0 183 289 19 0 chr2 226388342 226388498 -24299356 + (TG)n Simple_repeat Simple_repeat 2 160 0 591 233 23 64 chr2 226389240 226389412 -24298442 + MER34 LTR ERV1 1 165 -377 815 206 0 0 chr2 226389500 226389636 -24298218 + AluJo SINE Alu 1 136 -176 1924 158 0 3 chr2 226389636 226389940 -24297914 + AluJb SINE Alu 1 303 -9 2204 124 3 16 chr2 226389940 226390253 -24297601 + AluSg SINE Alu 1 310 0 2113 200 87 65 chr2 226390256 226390498 -24297356 + MER31-int LTR ERV1 1358 1593 -3343 1688 193 29 13 chr2 226390498 226390804 -24297050 - AluJb SINE Alu -1 311 1 2113 200 87 65 chr2 226390804 226391355 -24296499 + MER31-int LTR ERV1 1593 2168 -2768 1951 125 61 14 chr2 226391500 226391659 -24296195 - AluSx SINE Alu -2 310 160 2180 123 7 0 chr2 226391659 226391960 -24295894 - AluSx SINE Alu -9 303 1 1951 125 61 14 chr2 226391960 226392096 -24295758 - AluSx SINE Alu -152 160 1 684 322 109 16 chr2 226393352 226393774 -24294080 + L2 LINE L2 2564 3025 -288 474 240 75 20 chr2 226393856 226394002 -24293852 + MIR3 SINE MIR 8 161 -47 318 277 78 28 chr2 226394748 226394889 -24292965 - MER117 DNA MER1_type -2 195 48 222 228 18 18 chr2 226395204 226395261 -24292593 + MIR SINE MIR 179 235 -27 984 200 5 11 chr2 226395365 226395555 -24292299 - MER5A DNA MER1_type 0 189 1 238 219 48 116 chr2 226398366 226398512 -24289342 + L2 LINE L2 2458 2593 -721 1124 153 230 20 chr2 226398524 226398650 -24289204 - AluJb SINE Alu -12 300 202 207 0 0 0 chr2 226398650 226398673 -24289181 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1124 153 230 20 chr2 226398673 226398794 -24289060 - AluJb SINE Alu -110 202 1 406 231 13 0 chr2 226398953 226399031 -24288823 + AluJb SINE Alu 3 81 -231 632 330 37 35 chr2 226399305 226399759 -24288095 - L1ME LINE L1 -5549 521 67 452 307 97 27 chr2 226401096 226401353 -24286501 + L2 LINE L2 2579 2853 -461 2032 205 64 32 chr2 226401382 226402130 -24285724 + L1MDa LINE L1 1315 2159 -4381 1190 129 17 108 chr2 226402130 226402370 -24285484 + AluJb SINE Alu 85 302 -10 801 164 0 15 chr2 226402370 226402504 -24285350 + AluJo/FLAM SINE Alu 1 132 -170 1419 158 5 0 chr2 226402506 226402721 -24285133 + AluJb SINE Alu 85 300 -12 764 139 101 0 chr2 226402747 226402876 -24284978 + FRAM SINE Alu 16 157 -19 748 233 45 42 chr2 226402876 226403232 -24284622 + L1MDa LINE L1 2151 2507 -4033 508 279 15 0 chr2 226403340 226403476 -24284378 + MIR SINE MIR 117 254 -8 360 254 79 79 chr2 226404168 226404268 -24283586 - MIR SINE MIR -1 261 159 2039 142 40 0 chr2 226404268 226404592 -24283262 + MER1B DNA MER1_type 1 337 0 360 254 79 79 chr2 226404592 226404668 -24283186 - MIR SINE MIR -102 160 85 2049 121 3 0 chr2 226404726 226405036 -24282818 - AluSx SINE Alu 0 311 1 242 235 12 0 chr2 226405754 226405835 -24282019 + GA-rich Low_complexity Low_complexity 1 82 0 285 245 8 34 chr2 226405891 226406127 -24281727 + GA-rich Low_complexity Low_complexity 1 230 0 228 280 0 70 chr2 226406048 226406234 -24281620 + G-rich Low_complexity Low_complexity 6 178 0 * 261 0 0 0 chr2 226407535 226407564 -24280290 + (CA)n Simple_repeat Simple_repeat 2 30 0 272 279 0 0 chr2 226407583 226407651 -24280203 + (TA)n Simple_repeat Simple_repeat 2 69 0 2336 85 0 20 chr2 226409981 226410286 -24277568 + AluSq SINE Alu 1 299 -14 202 214 0 0 chr2 226411983 226412025 -24275829 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 388 253 110 26 chr2 226412270 226412424 -24275430 + MIR3 SINE MIR 8 174 -34 238 299 15 0 chr2 226413523 226413590 -24274264 + L2 LINE L2 3205 3272 0 961 248 43 9 chr2 226415556 226415786 -24272068 + MIR SINE MIR 24 261 -1 294 304 59 20 chr2 226415822 226415924 -24271930 + MIR SINE MIR 111 216 -46 348 111 0 0 chr2 226415959 226416013 -24271841 + (CAT)n Simple_repeat Simple_repeat 2 55 0 2997 292 81 84 chr2 226416179 226416805 -24271049 + L2 LINE L2 1462 2089 -1224 2284 119 0 0 chr2 226416805 226417100 -24270754 - AluSg SINE Alu -15 295 1 2997 292 81 84 chr2 226417100 226417415 -24270439 + L2 LINE L2 2089 2404 -909 2155 131 0 10 chr2 226417415 226417729 -24270125 + AluSx SINE Alu 1 311 -1 2997 292 81 84 chr2 226417729 226417914 -24269940 + L2 LINE L2 2404 2588 -725 402 101 29 0 chr2 226417914 226417983 -24269871 - MER41B LTR ERV1 -84 551 481 2997 292 81 84 chr2 226417983 226418664 -24269190 + L2 LINE L2 2588 3313 0 629 301 9 49 chr2 226420626 226420852 -24267002 + MIR SINE MIR 45 261 -1 1967 145 10 0 chr2 226420859 226421156 -24266698 - AluSx SINE Alu -12 300 1 308 294 145 34 chr2 226421162 226421424 -24266430 + L2 LINE L2 2458 2748 -566 378 259 99 66 chr2 226421435 226421673 -24266181 - L1MC5 LINE L1 -58 7905 7753 2386 81 0 16 chr2 226421673 226421983 -24265871 - AluY SINE Alu -4 307 3 378 259 99 66 chr2 226421983 226422252 -24265602 - L1MC5 LINE L1 -210 7753 7494 933 262 37 29 chr2 226422370 226422843 -24265011 - L1MC4 LINE L1 -604 7438 6962 995 161 33 11 chr2 226422848 226423028 -24264826 - AluJo SINE Alu -14 298 115 1411 154 25 105 chr2 226423028 226423352 -24264502 + AluYb8 SINE Alu 1 298 -20 278 125 69 28 chr2 226423355 226423427 -24264427 - L1ME LINE L1 -389 6035 5961 4548 118 45 39 chr2 226423427 226424792 -24263062 + pTR5 LTR ERV1 743 2438 0 1822 137 24 10 chr2 226424805 226425098 -24262756 - AluSg SINE Alu -13 297 1 537 243 35 24 chr2 226425098 226425160 -24262694 - L1ME LINE L1 -456 5974 5914 771 218 94 0 chr2 226425160 226425330 -24262524 + MER5A DNA MER1_type 2 187 -2 537 243 35 24 chr2 226425330 226425425 -24262429 - L1ME LINE L1 -516 5914 5812 1327 161 23 0 chr2 226425431 226425648 -24262206 + AluSg/x SINE Alu 87 308 -2 1100 245 65 65 chr2 226425659 226425826 -24262028 - L1ME LINE L1 -605 5819 5653 2185 123 0 3 chr2 226425826 226426126 -24261728 - AluSx SINE Alu -13 299 1 1100 245 65 65 chr2 226426126 226426361 -24261493 - L1ME LINE L1 -771 5653 5419 2725 14 3 0 chr2 226426361 226426657 -24261197 - AluY SINE Alu -14 297 1 1100 245 65 65 chr2 226426657 226426908 -24260946 - L1ME LINE L1 -1005 5419 5169 2727 38 0 6 chr2 226426908 226427221 -24260633 - AluY SINE Alu 0 311 1 1100 245 65 65 chr2 226427221 226427326 -24260528 - L1ME LINE L1 -1255 5169 5065 1468 157 0 9 chr2 226427326 226427549 -24260305 - AluJb SINE Alu -10 302 82 1100 245 65 65 chr2 226427549 226427695 -24260159 - L1ME LINE L1 -1359 5065 4913 960 218 198 22 chr2 226427748 226428157 -24259697 - L1ME3 LINE L1 -8 6154 5674 313 232 53 42 chr2 226428232 226428287 -24259567 - L1ME LINE L1 -5145 1264 1206 2269 104 0 0 chr2 226428287 226428576 -24259278 - AluY SINE Alu -3 308 20 313 232 53 42 chr2 226428576 226428615 -24259239 - L1ME LINE L1 -5203 1206 1169 462 257 28 11 chr2 226428615 226428794 -24259060 - L1M4 LINE L1 -2920 3226 3045 324 154 62 0 chr2 226428815 226428880 -24258974 - FLAM SINE Alu -1 132 64 2013 119 7 7 chr2 226428981 226429266 -24258588 - AluSx SINE Alu -27 285 1 1137 192 49 104 chr2 226429276 226429583 -24258271 - AluJo SINE Alu -12 290 1 1383 222 57 82 chr2 226429587 226429731 -24258123 - L1M4 LINE L1 -3090 3056 2910 2099 139 7 16 chr2 226429731 226430041 -24257813 + AluSx SINE Alu 5 311 -1 1383 222 57 82 chr2 226430041 226430210 -24257644 - L1M4 LINE L1 -3236 2910 2738 2580 68 0 3 chr2 226430210 226430520 -24257334 + AluY SINE Alu 1 309 -2 1383 222 57 82 chr2 226430520 226430597 -24257257 - L1M4 LINE L1 -3408 2738 2661 1878 174 7 0 chr2 226430597 226430891 -24256963 + AluJo SINE Alu 1 296 -16 1383 222 57 82 chr2 226430891 226431096 -24256758 - L1M4 LINE L1 -3485 2661 2474 2070 126 0 23 chr2 226431120 226431284 -24256570 - AluSx SINE Alu -15 297 142 2457 87 3 0 chr2 226431284 226431593 -24256261 - AluSp SINE Alu -3 310 1 2070 126 0 23 chr2 226431593 226431730 -24256124 - AluSx SINE Alu -170 142 3 377 73 0 0 chr2 226431731 226431786 -24256068 + Alu SINE Alu 240 294 -6 1241 102 0 6 chr2 226432072 226432266 -24255588 - AluSp SINE Alu 0 322 130 1009 215 14 10 chr2 226432430 226432639 -24255215 - AluJb SINE Alu -30 282 73 1772 190 7 0 chr2 226432792 226433081 -24254773 - AluJo SINE Alu -21 291 1 266 329 70 35 chr2 226433336 226433564 -24254290 + LTR16C LTR ERVL 256 491 0 194 143 143 0 chr2 226433650 226433692 -24254162 - L2 LINE L2 -1616 1698 1651 199 348 61 17 chr2 226433759 226433874 -24253980 - L2 LINE L2 -1616 1698 1579 1169 142 0 31 chr2 226434022 226434266 -24253588 - MLT1C LTR MaLR 0 467 174 631 191 9 0 chr2 226434276 226434391 -24253463 - FLAM_A SINE Alu -20 122 7 849 102 56 122 chr2 226434392 226434588 -24253266 - MLT1C LTR MaLR -284 183 1 285 308 23 28 chr2 226435070 226435256 -24252598 - L2 LINE L2 -298 2974 2791 397 119 0 0 chr2 226435331 226435390 -24252464 + L2 LINE L2 3184 3242 -30 1124 156 10 30 chr2 226435432 226435631 -24252223 + AluJo SINE Alu 1 195 -117 562 195 73 32 chr2 226435655 226435778 -24252076 + FRAM SINE Alu 24 151 -25 815 294 68 24 chr2 226435792 226436129 -24251725 - LTR16C LTR ERVL -43 448 97 1957 151 11 0 chr2 226436300 226436585 -24251269 - AluJb SINE Alu -20 292 5 2519 260 63 36 chr2 226437004 226437552 -24250302 + L1MEc LINE L1 2084 2616 -3599 213 39 0 0 chr2 226437552 226437578 -24250276 + (TAA)n Simple_repeat Simple_repeat 3 28 0 2247 103 0 3 chr2 226437580 226437870 -24249984 - AluSx SINE Alu -23 289 1 2519 260 63 36 chr2 226437870 226438751 -24249103 + L1MEc LINE L1 2616 3582 -2633 886 219 111 44 chr2 226438775 226438926 -24248928 + MLT1A2 LTR MaLR 1 141 -291 180 0 0 0 chr2 226438926 226438946 -24248908 + (GAA)n Simple_repeat Simple_repeat 2 21 0 886 219 111 44 chr2 226438946 226439138 -24248716 + MLT1A2 LTR MaLR 141 423 -9 2270 92 14 14 chr2 226439138 226439432 -24248422 + AluSx SINE Alu 1 294 -18 1247 226 97 83 chr2 226439447 226439827 -24248027 + L1MEc LINE L1 3602 3975 -2240 2364 115 0 0 chr2 226439827 226440131 -24247723 + AluSq SINE Alu 1 304 -9 1247 226 97 83 chr2 226440131 226440262 -24247592 + L1MEc LINE L1 3975 4103 -2112 2212 126 0 3 chr2 226440262 226440564 -24247290 + AluSx SINE Alu 1 301 -11 1247 226 97 83 chr2 226440564 226440598 -24247256 + L1MEc LINE L1 4103 4135 -2080 1879 184 15 3 chr2 226440598 226440934 -24246920 + MER2 DNA MER2_type 1 340 -4 1247 226 97 83 chr2 226440934 226440974 -24246880 + L1MEc LINE L1 4135 4197 -2018 423 284 52 82 chr2 226440975 226441137 -24246717 - L1MDb LINE L1 -4637 1950 1785 1931 122 30 7 chr2 226441137 226441432 -24246422 + AluSq SINE Alu 1 302 -11 423 284 52 82 chr2 226441432 226441545 -24246309 - L1MDb LINE L1 -4802 1785 1670 2420 91 0 0 chr2 226441545 226441843 -24246011 + AluY SINE Alu 1 298 -13 423 284 52 82 chr2 226441843 226441874 -24245980 - L1MDb LINE L1 -4917 1670 1640 2588 152 19 21 chr2 226441874 226442303 -24245551 - MSTC LTR MaLR 0 428 1 423 284 52 82 chr2 226442303 226442416 -24245438 - L1MDb LINE L1 -4947 1640 1545 2105 91 95 0 chr2 226442416 226442701 -24245153 - AluSq SINE Alu -1 312 1 423 284 52 82 chr2 226442701 226442799 -24245055 - L1MDb LINE L1 -5042 1545 1446 381 256 103 104 chr2 226442803 226442848 -24245006 - L1MDb LINE L1 -4978 1418 1374 2066 144 10 7 chr2 226442848 226443153 -24244701 - AluJb SINE Alu -6 306 1 381 256 103 104 chr2 226443153 226443327 -24244527 - L1MDb LINE L1 -5022 1374 1201 2363 98 7 0 chr2 226443327 226443634 -24244220 - AluY SINE Alu -2 309 1 381 256 103 104 chr2 226443634 226443886 -24243968 - L1MDb LINE L1 -5195 1201 930 183 42 0 0 chr2 226443891 226443915 -24243939 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 455 320 26 62 chr2 226444608 226444917 -24242937 + LTR16C LTR ERVL 194 491 0 328 223 22 86 chr2 226444993 226445090 -24242764 - L2 LINE L2 -1606 1708 1621 2469 103 0 0 chr2 226445090 226445401 -24242453 - AluSx SINE Alu -1 311 1 328 223 22 86 chr2 226445401 226445442 -24242412 - L2 LINE L2 -1693 1621 1579 328 243 18 0 chr2 226445455 226445566 -24242288 + CT-rich Low_complexity Low_complexity 1 113 0 1552 218 3 19 chr2 226445566 226445882 -24241972 - AluJo SINE Alu -1 311 1 3773 111 0 4 chr2 226446036 226446549 -24241305 - MER9 LTR ERVK 0 511 1 2530 55 0 26 chr2 226446802 226447109 -24240745 + AluY SINE Alu 1 299 -12 266 380 85 36 chr2 226447469 226447916 -24239938 - L2 LINE L2 0 3272 2804 378 221 65 0 chr2 226447972 226448049 -24239805 + L2 LINE L2 3200 3281 -32 884 310 23 33 chr2 226448053 226448328 -24239526 - LTR16C LTR ERVL -2 489 218 2305 105 13 0 chr2 226448328 226448633 -24239221 - AluSq SINE Alu -4 309 1 884 310 23 33 chr2 226448633 226448754 -24239100 - LTR16C LTR ERVL -273 218 97 531 312 67 9 chr2 226450482 226450927 -24236927 + L2 LINE L2 2560 3056 -257 218 240 0 20 chr2 226451260 226451310 -24236544 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 1557 163 83 14 chr2 226451398 226451674 -24236180 - AluJo SINE Alu -17 295 1 235 308 154 12 chr2 226451912 226452081 -24235773 - MIR SINE MIR -55 207 15 252 377 154 0 chr2 226453034 226453209 -24234645 + MIR SINE MIR 43 244 -18 2147 131 0 0 chr2 226453328 226453619 -24234235 + AluSx SINE Alu 1 291 -21 4270 152 54 36 chr2 226454958 226455100 -24232754 + L1MB8 LINE L1 5296 5434 -744 2372 109 0 0 chr2 226455100 226455403 -24232451 + AluSx SINE Alu 1 303 -9 4270 152 54 36 chr2 226455403 226455576 -24232278 + L1MB8 LINE L1 5434 5602 -576 2302 120 0 0 chr2 226455576 226455875 -24231979 + AluSx SINE Alu 1 299 -13 4270 152 54 36 chr2 226455875 226456425 -24231429 + L1MB8 LINE L1 5602 6178 0 1959 90 4 4 chr2 226456437 226456681 -24231173 + AluSp SINE Alu 1 244 -69 1122 188 39 87 chr2 226656809 226656946 -24030908 + MLT1D LTR MaLR 1 143 -362 1994 162 3 0 chr2 226656946 226657254 -24030600 - AluJb SINE Alu -3 309 1 1122 188 39 87 chr2 226657254 226657472 -24030382 + MLT1D LTR MaLR 143 339 -166 1014 176 0 37 chr2 226657473 226657660 -24030194 + AluJ SINE Alu 1 180 -132 428 90 15 0 chr2 226657660 226657727 -24030127 - 7SK RNA RNA -5 188 121 718 150 0 16 chr2 226657763 226657890 -24029964 - 7SK RNA RNA -68 125 1 953 152 0 0 chr2 226657891 226658036 -24029818 + AluJ SINE Alu 162 306 -6 893 143 34 29 chr2 226658037 226658212 -24029642 + MLT1D LTR MaLR 330 505 0 370 271 14 86 chr2 226658236 226658304 -24029550 + L2 LINE L2 3183 3238 -75 2112 108 3 7 chr2 226658304 226658600 -24029254 - AluSq SINE Alu -18 295 1 370 271 14 86 chr2 226658600 226658671 -24029183 + L2 LINE L2 3238 3312 -1 2351 89 0 0 chr2 226658834 226659137 -24028717 - AluSc SINE Alu -6 303 1 300 53 0 0 chr2 226659395 226659433 -24028421 + (T)n Simple_repeat Simple_repeat 1 38 0 929 164 0 0 chr2 226660274 226660414 -24027440 - FRAM SINE Alu -39 137 1 2082 132 30 0 chr2 226660735 226661038 -24026816 - AluSx SINE Alu 0 312 1 2402 58 0 0 chr2 226661489 226661783 -24026071 - AluY SINE Alu -17 294 1 2244 108 0 0 chr2 226661806 226662111 -24025743 - AluSq SINE Alu -8 305 1 180 0 0 0 chr2 226662360 226662380 -24025474 + (A)n Simple_repeat Simple_repeat 1 20 0 3444 151 105 29 chr2 226662890 226663279 -24024575 - MER39 LTR ERV1 0 707 246 2164 83 7 0 chr2 226663279 226663569 -24024285 - AluSp SINE Alu -21 292 1 3444 151 105 29 chr2 226663569 226663836 -24024018 - MER39 LTR ERV1 -461 246 1 2452 149 94 22 chr2 226664336 226664485 -24023369 + MER41C LTR ERV1 8 145 -409 2378 80 3 0 chr2 226664485 226664785 -24023069 - AluY SINE Alu -10 301 1 2452 149 94 22 chr2 226664785 226665021 -24022833 + MER41C LTR ERV1 145 441 -113 1822 138 64 0 chr2 226665021 226665303 -24022551 - AluSx SINE Alu -12 300 1 2452 149 94 22 chr2 226665303 226665426 -24022428 + MER41C LTR ERV1 441 554 0 12599 126 23 18 chr2 226665426 226667420 -24020434 + MER41C-int LTR ERV1 1 1982 -5774 2376 90 3 6 chr2 226667420 226667732 -24020122 + AluSx SINE Alu 1 311 -1 12599 126 23 18 chr2 226667732 226667850 -24020004 + MER41C-int LTR ERV1 1982 2129 -5627 1356 93 28 0 chr2 226667850 226668075 -24019779 + L1PA8 LINE L1 5976 6205 0 12599 126 23 18 chr2 226668075 226668127 -24019727 + MER41C-int LTR ERV1 2129 2179 -5577 8782 105 14 21 chr2 226668227 226668397 -24019457 + PRIMA41-int LTR ERV1 1848 2018 -5738 2142 121 3 10 chr2 226668397 226668710 -24019144 + AluSx SINE Alu 1 311 -1 8782 105 14 21 chr2 226668710 226668828 -24019026 + PRIMA41-int LTR ERV1 2018 2135 -5621 1410 77 28 0 chr2 226668828 226669053 -24018801 + L1PA8 LINE L1 5976 6205 0 8782 105 14 21 chr2 226669053 226669917 -24017937 + PRIMA41-int LTR ERV1 2135 2994 -4762 2311 110 0 0 chr2 226669917 226670226 -24017628 - AluSx SINE Alu -3 309 1 8782 105 14 21 chr2 226670226 226670462 -24017392 + PRIMA41-int LTR ERV1 2994 3230 -4526 * 9405 108 11 17 chr2 226670442 226671866 -24015988 + PRIMA41-int LTR ERV1 5258 6675 -1081 2298 74 0 0 chr2 226671866 226672177 -24015677 - AluY SINE Alu 0 311 1 9405 108 11 17 chr2 226672177 226672264 -24015590 + PRIMA41-int LTR ERV1 6675 6761 -995 1450 160 19 12 chr2 226672264 226672520 -24015334 - AluJb SINE Alu -54 258 1 744 274 62 25 chr2 226672574 226672670 -24015184 + MIR SINE MIR 3 94 -168 2215 109 0 0 chr2 226672670 226672972 -24014882 - AluSg SINE Alu -6 304 3 744 274 62 25 chr2 226672972 226673116 -24014738 + MIR SINE MIR 94 252 -10 1667 102 0 0 chr2 226673217 226673470 -24014384 + AluSg/x SINE Alu 69 310 0 739 189 16 0 chr2 226673483 226673610 -24014244 + FLAM_C SINE Alu 1 129 -4 23 0 0 0 chr2 226673610 226673633 -24014221 + AT_rich Low_complexity Low_complexity 1 23 0 2299 93 3 0 chr2 226673997 226674297 -24013557 + AluSg SINE Alu 1 301 -9 840 227 6 6 chr2 226674409 226674572 -24013282 + FRAM SINE Alu 4 166 0 798 179 0 21 chr2 226675177 226675317 -24012537 - FLAM_C SINE Alu -1 142 6 245 275 158 17 chr2 226675413 226675533 -24012321 + MLT1K LTR MaLR 379 515 -73 1806 104 86 14 chr2 226675558 226675836 -24012018 - AluSx SINE Alu -14 298 1 363 23 0 0 chr2 226677208 226677252 -24010602 + (CA)n Simple_repeat Simple_repeat 2 45 0 315 260 59 3 chr2 226679491 226679636 -24008218 - L1MC/D LINE L1 -533 5588 5438 2043 161 0 0 chr2 226679659 226679970 -24007884 - AluJo SINE Alu -1 311 1 2018 68 48 41 chr2 226679979 226680274 -24007580 - AluY SINE Alu -14 297 1 290 349 0 0 chr2 226680366 226680452 -24007402 + GA-rich Low_complexity Low_complexity 3 88 0 372 266 172 16 chr2 226680600 226680728 -24007126 - MIR3 SINE MIR -45 163 16 537 303 33 50 chr2 226681077 226681306 -24006548 - MIR SINE MIR -25 237 1 522 113 0 0 chr2 226681916 226682013 -24005841 + (CA)n Simple_repeat Simple_repeat 2 98 0 236 255 0 0 chr2 226682159 226682206 -24005648 + (CTGGGG)n Simple_repeat Simple_repeat 1 47 0 235 235 0 37 chr2 226682618 226682699 -24005155 + C-rich Low_complexity Low_complexity 2 79 0 292 237 114 61 chr2 226683861 226683992 -24003862 - MER5B DNA MER1_type -39 139 2 210 71 0 0 chr2 226684863 226684891 -24002963 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 2134 97 3 13 chr2 226684919 226685217 -24002637 + AluSx SINE Alu 1 295 -17 422 191 33 138 chr2 226685328 226685480 -24002374 - MIR3 SINE MIR -31 177 42 704 260 43 52 chr2 226687472 226687572 -24000282 - MIR SINE MIR -2 260 161 1605 113 5 0 chr2 226687572 226687794 -24000060 - AluSg/x SINE Alu -14 296 74 704 260 43 52 chr2 226687794 226687924 -23999930 - MIR SINE MIR -101 161 32 292 293 170 20 chr2 226688166 226688313 -23999541 + MER5A DNA MER1_type 7 175 -14 1836 143 34 3 chr2 226688877 226689171 -23998683 - AluSx SINE Alu -7 305 3 195 42 0 0 chr2 226689171 226689195 -23998659 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 650 146 19 10 chr2 226689196 226689299 -23998555 - FLAM_A SINE Alu -28 114 11 519 271 90 27 chr2 226689415 226689603 -23998251 - MIR SINE MIR -6 256 57 202 299 0 58 chr2 226689660 226689747 -23998107 + MER5A DNA MER1_type 3 84 -105 200 253 211 11 chr2 226689691 226689786 -23998068 - MER5A DNA MER1_type -22 167 54 * 256 302 175 8 chr2 226689782 226689908 -23997946 - L3 LINE CR1 -5 1572 1426 349 284 77 82 chr2 226691769 226691890 -23995964 - L2 LINE L2 -10 3303 3182 827 238 115 59 chr2 226691890 226692213 -23995641 + MER102b DNA MER1_type 1 341 0 349 284 77 82 chr2 226692213 226692274 -23995580 - L2 LINE L2 -131 3182 3122 188 355 71 41 chr2 226692365 226692534 -23995320 - L2 LINE L2 -85 3187 3014 574 233 84 6 chr2 226693736 226693909 -23993945 + MIR SINE MIR 75 261 -1 548 236 19 13 chr2 226693909 226694066 -23993788 + MER46C DNA MER2_type 2 159 -179 491 301 39 20 chr2 226694135 226694338 -23993516 + MER46C DNA MER2_type 131 337 -1 202 143 0 24 chr2 226694338 226694380 -23993474 + (TTA)n Simple_repeat Simple_repeat 3 43 0 813 277 44 26 chr2 226694947 226695218 -23992636 - L2 LINE L2 0 3313 3038 496 323 41 10 chr2 226695190 226695385 -23992469 + MIR SINE MIR 48 248 -14 * 593 303 70 5 chr2 226696803 226696988 -23990866 + MIR SINE MIR 2 198 -64 282 230 99 86 chr2 226698327 226698386 -23989468 + MIR SINE MIR 81 138 -124 1643 136 79 4 chr2 226698386 226698651 -23989203 + AluJo SINE Alu 1 285 -27 282 230 99 86 chr2 226698651 226698743 -23989111 + MIR SINE MIR 138 234 -28 * 537 294 73 28 chr2 226698731 226698949 -23988905 - MIR SINE MIR -15 247 20 644 270 96 9 chr2 226700458 226700688 -23987166 - MIR SINE MIR -3 259 10 922 300 134 13 chr2 226705074 226705727 -23982127 + L2 LINE L2 2574 3311 -2 2054 87 56 7 chr2 226706904 226707191 -23980663 + AluSg SINE Alu 1 301 -9 791 274 43 0 chr2 226708343 226708529 -23979325 - MER91A DNA MER1_type -2 194 1 372 282 81 35 chr2 226708738 226708912 -23978942 - MIR SINE MIR -61 201 20 22 0 0 0 chr2 226710307 226710329 -23977525 + GC_rich Low_complexity Low_complexity 1 22 0 197 290 32 43 chr2 226711222 226711315 -23976539 + MIR SINE MIR 49 140 -122 303 240 182 8 chr2 226711403 226711537 -23976317 - MIR SINE MIR -6 202 49 268 268 93 10 chr2 226711608 226711705 -23976149 - MIR SINE MIR -71 191 87 316 293 171 24 chr2 226712415 226712620 -23975234 + MIR SINE MIR 28 262 0 196 324 213 7 chr2 226712595 226712731 -23975123 - MIR SINE MIR -49 213 50 * 216 244 0 0 chr2 226715638 226715679 -23972175 + C-rich Low_complexity Low_complexity 3 43 0 185 333 49 0 chr2 226717525 226717606 -23970248 + L2 LINE L2 3171 3255 -17 2199 128 0 0 chr2 226717894 226718206 -23969648 + AluSx SINE Alu 1 312 0 234 215 0 0 chr2 226718305 226718384 -23969470 + (CA)n Simple_repeat Simple_repeat 1 79 0 632 161 18 6 chr2 226718399 226718567 -23969287 + (CA)n Simple_repeat Simple_repeat 1 170 0 250 179 18 0 chr2 226718586 226718642 -23969212 + (CA)n Simple_repeat Simple_repeat 1 57 0 456 35 0 0 chr2 226719144 226719202 -23968652 + (TGGA)n Simple_repeat Simple_repeat 2 59 0 997 269 82 7 chr2 226719268 226719691 -23968163 + LTR33 LTR ERVL 1 476 -45 1919 155 7 3 chr2 226719906 226720216 -23967638 - AluJb SINE Alu -1 311 1 474 310 132 39 chr2 226720221 226720576 -23967278 + L2 LINE L2 2836 3223 -49 200 209 23 0 chr2 226720588 226720631 -23967223 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 260 258 58 50 chr2 226720704 226720824 -23967030 - MIR3 SINE MIR -84 124 4 272 377 13 0 chr2 226721136 226721290 -23966564 + (CA)n Simple_repeat Simple_repeat 1 156 0 411 286 212 38 chr2 226722337 226722579 -23965275 + L2 LINE L2 2244 2443 -870 1765 165 0 53 chr2 226722579 226722900 -23964954 - AluJb SINE Alu -8 304 1 411 286 212 38 chr2 226722900 226723532 -23964322 + L2 LINE L2 2443 3275 -38 317 270 50 10 chr2 226724226 226724326 -23963528 - MIR SINE MIR -94 168 65 710 229 13 0 chr2 226724719 226724872 -23962982 - MIR SINE MIR -20 242 88 2082 120 0 0 chr2 226725129 226725436 -23962418 + AluSx SINE Alu 3 309 0 2035 106 0 20 chr2 226725452 226725745 -23962109 + AluSg SINE Alu 14 300 -10 198 296 125 23 chr2 226726015 226726103 -23961751 + L2 LINE L2 3123 3219 -53 600 285 34 14 chr2 226726135 226726342 -23961512 - MIR SINE MIR 0 262 52 299 348 36 0 chr2 226728354 226728492 -23959362 - MIR3 SINE MIR -19 189 47 431 326 9 48 chr2 226728516 226728743 -23959111 + MIR SINE MIR 35 252 -10 484 297 36 21 chr2 226728821 226729013 -23958841 + MIR SINE MIR 6 200 -62 336 352 66 11 chr2 226729249 226729431 -23958423 + MIR SINE MIR 52 243 -19 * 740 242 183 5 chr2 226729402 226729621 -23958233 - MIR SINE MIR 0 262 5 184 258 76 30 chr2 226729608 226729674 -23958180 + L2 LINE L2 3197 3265 -7 * 485 229 23 38 chr2 226729690 226729821 -23958033 - L2 LINE L2 -5 3308 3180 1916 137 3 13 chr2 226729844 226730143 -23957711 + AluJo SINE Alu 1 296 -16 35 41 0 0 chr2 226731204 226731253 -23956601 + GC_rich Low_complexity Low_complexity 1 49 0 328 347 14 14 chr2 226731625 226731769 -23956085 - L3b LINE CR1 -315 1268 1125 457 289 30 35 chr2 226732998 226733195 -23954659 + MER102b DNA MER1_type 127 322 -19 997 164 148 6 chr2 226734240 226734423 -23953431 - MER3 DNA MER1_type 0 209 1 520 268 50 50 chr2 226734661 226734792 -23953062 - MIR SINE MIR -1 261 128 2068 73 7 4 chr2 226734792 226735066 -23952788 + AluY SINE Alu 30 304 -7 520 268 50 50 chr2 226735066 226735154 -23952700 - MIR SINE MIR -133 129 42 223 295 16 0 chr2 226735178 226735239 -23952615 - MIR3 SINE MIR -49 159 98 313 301 0 70 chr2 226735736 226735879 -23951975 + L2 LINE L2 3138 3270 -2 246 283 0 61 chr2 226736769 226736868 -23950986 + C-rich Low_complexity Low_complexity 1 93 0 211 273 0 0 chr2 226737872 226737916 -23949938 + (CGTG)n Simple_repeat Simple_repeat 4 47 0 203 184 0 0 chr2 226739434 226739472 -23948382 + (CTG)n Simple_repeat Simple_repeat 2 39 0 225 65 0 0 chr2 226739549 226739580 -23948274 + (CGAG)n Simple_repeat Simple_repeat 4 34 0 245 225 17 67 chr2 226741975 226742095 -23945759 + CT-rich Low_complexity Low_complexity 3 116 0 316 261 0 0 chr2 226747389 226747458 -23940396 + L2 LINE L2 3203 3271 -1 220 343 143 14 chr2 226747999 226748139 -23939715 - MIR3 SINE MIR -7 201 44 253 302 9 9 chr2 226749125 226749231 -23938623 + (CAGAGA)n Simple_repeat Simple_repeat 5 110 0 225 314 96 72 chr2 226749923 226750452 -23937402 + L2 LINE L2 2609 3238 -34 253 264 0 0 chr2 226750452 226750505 -23937349 + (TG)n Simple_repeat Simple_repeat 2 54 0 1949 125 29 0 chr2 226750554 226750835 -23937019 + AluSx SINE Alu 9 297 -15 914 187 0 0 chr2 226750835 226751024 -23936830 + AluJb SINE Alu 134 322 0 361 244 109 64 chr2 226751131 226751287 -23936567 + L2 LINE L2 2919 3081 -191 225 227 121 0 chr2 226752598 226752664 -23935190 + MIR3 SINE MIR 81 154 -54 1166 188 6 136 chr2 226752681 226753033 -23934821 - AluSc SINE Alu -3 306 1 515 266 92 12 chr2 226753214 226753387 -23934467 - MIR SINE MIR -40 222 36 315 222 111 0 chr2 226753582 226753663 -23934191 - MER91C DNA MER1_type -14 126 37 293 313 27 41 chr2 226756346 226756493 -23931361 + MIR SINE MIR 71 215 -47 333 275 12 0 chr2 226756533 226756613 -23931241 + MIR SINE MIR 16 96 -112 249 235 37 49 chr2 226759003 226759084 -23928770 + MIR3 SINE MIR 127 206 -2 1895 116 0 0 chr2 226759598 226759849 -23928005 - AluSx SINE Alu -21 291 41 212 194 42 56 chr2 226760875 226760947 -23926907 + CT-rich Low_complexity Low_complexity 1 71 0 213 295 156 16 chr2 226761455 226761577 -23926277 + MIR SINE MIR 52 190 -72 390 303 25 1 chr2 226762482 226762620 -23925234 + MIR SINE MIR 6 146 -62 22 0 0 0 chr2 226762697 226762719 -23925135 + AT_rich Low_complexity Low_complexity 1 22 0 467 259 121 0 chr2 226762745 226762919 -23924935 + MIR SINE MIR 56 250 -12 684 285 27 36 chr2 226763661 226763882 -23923972 + MIR SINE MIR 13 231 -31 684 285 27 36 chr2 226764740 226764961 -23922893 + MIR SINE MIR 13 231 -31 262 228 0 0 chr2 226767115 226767172 -23920682 + MIR SINE MIR 201 257 -5 366 262 152 24 chr2 226767498 226767662 -23920192 + MIR SINE MIR 78 262 0 204 149 0 43 chr2 226767910 226767957 -23919897 + (TGGGGG)n Simple_repeat Simple_repeat 1 45 0 483 323 87 15 chr2 226769231 226769426 -23918428 + MIR SINE MIR 54 262 0 21 57 0 0 chr2 226771135 226771170 -23916684 + GC_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr2 226771486 226771521 -23916333 + GC_rich Low_complexity Low_complexity 1 35 0 229 292 10 42 chr2 226772887 226772983 -23914871 - L2 LINE L2 -40 3232 3140 342 331 55 8 chr2 226773171 226773298 -23914556 + MIR SINE MIR 117 249 -13 577 254 61 0 chr2 226773959 226774124 -23913730 + MER115 DNA AcHobo 46 220 -473 389 216 8 56 chr2 226774161 226774286 -23913568 + MER115 DNA AcHobo 331 449 -244 236 233 145 5 chr2 226775409 226775522 -23912332 - MER91 DNA MER1_type 0 140 1 296 326 0 0 chr2 226776094 226776180 -23911674 + MIR SINE MIR 60 145 -63 693 183 31 68 chr2 226776575 226776766 -23911088 + MIR SINE MIR 69 252 -10 354 218 45 70 chr2 226778448 226778604 -23909250 + Charlie8 DNA MER1_type 72 223 -2194 1723 144 55 10 chr2 226779961 226780253 -23907601 + AluSx SINE Alu 1 305 -7 856 223 48 18 chr2 226780415 226780644 -23907210 + MIR SINE MIR 11 246 -16 2252 112 0 0 chr2 226780646 226780950 -23906904 - AluSq SINE Alu -9 304 1 454 290 14 55 chr2 226781640 226781785 -23906069 - MIR SINE MIR -122 140 2 180 311 117 29 chr2 226784010 226784113 -23903741 + L2 LINE L2 3183 3294 -19 380 278 157 45 chr2 226784135 226784334 -23903520 - MIR SINE MIR -24 238 21 490 279 55 28 chr2 226784683 226784928 -23902926 + MIR SINE MIR 3 251 -11 476 233 203 0 chr2 226785286 226785449 -23902405 - MIR SINE MIR -24 238 43 621 330 10 0 chr2 226787190 226787398 -23900456 - MIR SINE MIR -34 228 16 213 94 0 0 chr2 226788608 226788640 -23899214 + (CAGA)n Simple_repeat Simple_repeat 4 35 0 747 228 0 0 chr2 226789056 226789236 -23898618 + (CA)n Simple_repeat Simple_repeat 1 180 0 201 304 0 0 chr2 226790038 226790094 -23897760 + G-rich Low_complexity Low_complexity 2 57 0 421 308 17 0 chr2 226790243 226790360 -23897494 + MIR3 SINE MIR 81 199 -9 2042 144 0 6 chr2 226790896 226791209 -23896645 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 226791247 226791268 -23896586 + AT_rich Low_complexity Low_complexity 1 21 0 2240 82 26 7 chr2 226791342 226791648 -23896206 + AluSx SINE Alu 1 312 0 1448 185 4 8 chr2 226791824 226792084 -23895770 - AluJo SINE Alu -16 296 38 1978 150 3 7 chr2 226792118 226792412 -23895442 - AluSx SINE Alu -19 293 1 517 340 27 5 chr2 226796127 226796312 -23891542 + MER5A DNA MER1_type 1 189 0 215 280 0 0 chr2 226796384 226796434 -23891420 - MIR SINE MIR -193 69 20 795 126 0 209 chr2 226796485 226796724 -23891130 - MER5A DNA MER1_type 0 189 1 207 289 124 71 chr2 226796922 226797286 -23890568 - L2 LINE L2 -42 3230 2848 1934 152 7 3 chr2 226797436 226797746 -23890108 - AluSx SINE Alu -1 311 1 2131 132 0 3 chr2 226798108 226798419 -23889435 - AluSg SINE Alu 0 310 1 913 198 15 0 chr2 226799520 226799717 -23888137 - MER3 DNA MER1_type -9 200 1 509 257 111 0 chr2 226799765 226799909 -23887945 + MIR SINE MIR 93 252 -10 2106 124 0 0 chr2 226799920 226800235 -23887619 - AluSx SINE Alu 0 315 1 233 250 0 0 chr2 226800560 226800608 -23887246 + L2 LINE L2 3263 3310 -3 281 248 50 30 chr2 226801643 226801744 -23886110 - MIR SINE MIR -54 208 106 184 391 62 16 chr2 226804442 226804570 -23883284 - L2 LINE L2 -1 3312 3179 508 282 71 24 chr2 226804661 226804831 -23883023 + MIR SINE MIR 57 234 -28 914 237 12 33 chr2 226808114 226808359 -23879495 - MIR SINE MIR 0 262 23 255 61 0 0 chr2 226811270 226811303 -23876551 + (CA)n Simple_repeat Simple_repeat 1 33 0 239 133 22 22 chr2 226812073 226812118 -23875736 + SN5 Other centromeric 9 53 -402 27 0 0 0 chr2 226812598 226812625 -23875229 + GC_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr2 226812810 226812839 -23875015 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 226812934 226812955 -23874899 + GC_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 226812997 226813030 -23874824 + GC_rich Low_complexity Low_complexity 1 33 0 216 147 40 13 chr2 226813041 226813116 -23874738 + G-rich Low_complexity Low_complexity 5 81 0 270 81 0 0 chr2 226813152 226813189 -23874665 + (CGG)n Simple_repeat Simple_repeat 2 38 0 386 254 124 53 chr2 226813912 226814081 -23873773 - MIR SINE MIR -1 261 81 599 202 274 12 chr2 226814171 226814339 -23873515 - MIR SINE MIR 0 262 51 612 162 10 0 chr2 226814340 226814439 -23873415 + AluSg/x SINE Alu 179 278 -34 406 0 0 36 chr2 226814442 226814498 -23873356 + (TAAA)n Simple_repeat Simple_repeat 1 54 0 1540 194 0 25 chr2 226814628 226814947 -23872907 - AluJo SINE Alu -1 311 1 291 250 66 121 chr2 226815517 226815773 -23872081 + L2 LINE L2 3055 3296 -17 184 138 0 0 chr2 226815747 226815776 -23872078 + MIR SINE MIR 226 254 -8 * 434 251 114 12 chr2 226816630 226816797 -23871057 + MIR SINE MIR 14 197 -65 200 118 29 0 chr2 226817815 226817849 -23870005 + CT-rich Low_complexity Low_complexity 1 35 0 324 261 17 117 chr2 226817886 226818066 -23869788 + MIR3 SINE MIR 38 199 -9 295 252 118 15 chr2 226820649 226820784 -23867070 + MIR3 SINE MIR 10 158 -50 312 291 147 46 chr2 226820807 226821092 -23866762 - L2 LINE L2 -339 2975 2662 257 290 121 16 chr2 226821109 226821233 -23866621 - MER5A DNA MER1_type -49 140 4 2144 113 3 3 chr2 226821279 226821588 -23866266 + AluSx SINE Alu 1 309 -3 1460 173 7 59 chr2 226821590 226821896 -23865958 + L1MD2 LINE L1 6068 6357 -2 521 231 5 108 chr2 226822148 226822174 -23865680 - L1MC3 LINE L1 -1629 6156 6129 2307 81 3 0 chr2 226822174 226822470 -23865384 - AluSp SINE Alu -16 297 1 521 231 5 108 chr2 226822470 226822655 -23865199 - L1MC3 LINE L1 -1656 6129 5967 353 257 0 0 chr2 226822868 226822938 -23864916 + MIR SINE MIR 79 148 -114 639 240 122 103 chr2 226822982 226823129 -23864725 - L2 LINE L2 0 3313 3170 2226 116 0 0 chr2 226823129 226823439 -23864415 + AluSx SINE Alu 1 310 -2 639 240 122 103 chr2 226823439 226823895 -23863959 - L2 LINE L2 -143 3170 2701 23 0 0 0 chr2 226823903 226823926 -23863928 + AT_rich Low_complexity Low_complexity 1 23 0 276 263 32 21 chr2 226824293 226824389 -23863465 + MIR SINE MIR 20 117 -91 238 211 18 18 chr2 226824424 226824481 -23863373 + L2 LINE L2 3216 3272 0 468 250 0 39 chr2 226824553 226824681 -23863173 - L2 LINE L2 0 3313 3191 2264 60 3 48 chr2 226825054 226825369 -23862485 - AluY SINE Alu -10 301 1 845 139 16 0 chr2 226825382 226825511 -23862343 - FLAM_C SINE Alu 0 133 3 480 298 74 41 chr2 226825695 226825937 -23861917 + L3 LINE CR1 1324 1573 -4 1926 139 10 0 chr2 226827049 226827350 -23860504 - AluJo SINE Alu -8 304 1 255 241 17 78 chr2 226827415 226827531 -23860323 - L1M4 LINE L1 -1537 4609 4501 1763 172 3 10 chr2 226827607 226827909 -23859945 + AluJb SINE Alu 13 312 0 2260 92 0 0 chr2 226829854 226830149 -23857705 + AluSg SINE Alu 1 295 -15 230 286 77 11 chr2 226830198 226830289 -23857565 + MIR SINE MIR 71 167 -95 2139 83 0 0 chr2 226831334 226831612 -23856242 + AluY SINE Alu 23 300 -11 809 141 0 96 chr2 226832159 226832285 -23855569 - L1ME2 LINE L1 -3 6161 6055 2184 115 0 3 chr2 226832285 226832589 -23855265 + AluSx SINE Alu 1 303 -9 809 141 0 96 chr2 226832589 226832639 -23855215 - L1ME2 LINE L1 -109 6055 6002 201 306 0 24 chr2 226832801 226832886 -23854968 + CT-rich Low_complexity Low_complexity 2 84 0 2330 75 3 0 chr2 226833086 226833381 -23854473 + AluSq SINE Alu 2 297 -16 223 337 24 0 chr2 226833959 226834042 -23853812 - MIR3 SINE MIR -46 162 78 366 280 40 32 chr2 226835169 226835294 -23852560 + L2 LINE L2 3134 3259 -13 202 208 0 19 chr2 226836598 226836651 -23851203 + (CGGG)n Simple_repeat Simple_repeat 4 55 0 183 229 21 21 chr2 226838042 226838090 -23849764 + MIR3 SINE MIR 109 156 -52 489 268 78 0 chr2 226838149 226838291 -23849563 - MIR SINE MIR 0 262 110 289 289 8 33 chr2 226838684 226838805 -23849049 + MLT1K LTR MaLR 156 273 -315 207 0 0 0 chr2 226839005 226839028 -23848826 + (T)n Simple_repeat Simple_repeat 1 23 0 692 281 83 73 chr2 226839075 226839485 -23848369 + MARNA DNA Mariner 93 506 -80 4594 142 21 25 chr2 226839773 226840529 -23847325 - L1MB3 LINE L1 -3 6180 5426 1688 172 13 16 chr2 226840529 226840837 -23847017 - AluJo SINE Alu -5 307 1 4594 142 21 25 chr2 226840837 226840857 -23846997 - L1MB3 LINE L1 -757 5426 5407 814 217 0 0 chr2 226840857 226841014 -23846840 - AluJo SINE Alu -35 277 121 2545 198 20 62 chr2 226841014 226841447 -23846407 - L1M LINE L1 -743 5403 4953 825 235 0 12 chr2 226841447 226841630 -23846224 - AluJo SINE Alu 0 302 122 2545 198 20 62 chr2 226841630 226842532 -23845322 - L1M LINE L1 -1193 4953 4015 2263 100 0 0 chr2 226842532 226842831 -23845023 + AluSg SINE Alu 1 299 -11 2545 198 20 62 chr2 226842831 226842895 -23844959 - L1M LINE L1 -2131 4015 3950 1610 160 3 38 chr2 226842895 226843211 -23844643 - AluJb SINE Alu 0 306 1 2545 198 20 62 chr2 226843211 226843287 -23844567 - L1M LINE L1 -2196 3950 3497 464 278 37 16 chr2 226843291 226843450 -23844404 - L1ME LINE L1 -297 5824 5659 2228 76 10 0 chr2 226843450 226843741 -23844113 - AluSp SINE Alu -19 294 1 464 278 37 16 chr2 226843741 226843768 -23844086 - L1ME LINE L1 -462 5659 5634 181 200 55 36 chr2 226843888 226843943 -23843911 + L2 LINE L2 3257 3312 -1 2297 78 10 0 chr2 226843988 226844296 -23843558 + AluY SINE Alu 1 311 0 336 281 65 146 chr2 226844319 226844558 -23843296 - L3 LINE CR1 -3 1574 1382 2098 124 0 6 chr2 226844558 226844872 -23842982 + AluSx SINE Alu 1 312 0 336 281 65 146 chr2 226844872 226845049 -23842805 - L3 LINE CR1 -195 1382 1192 267 322 89 17 chr2 226845073 226845253 -23842601 + L2 LINE L2 2768 2960 -354 1588 181 3 13 chr2 226846920 226847218 -23840636 + AluJo SINE Alu 7 301 -11 271 294 75 7 chr2 226847241 226847380 -23840474 + MIR SINE MIR 17 165 -64 2222 106 3 3 chr2 226847419 226847730 -23840124 - AluSq SINE Alu 0 313 3 646 239 154 5 chr2 226848394 226848582 -23839272 + MIR SINE MIR 46 261 -1 303 329 21 28 chr2 226848581 226848724 -23839130 - MIR SINE MIR -101 161 20 * 640 230 68 47 chr2 226848748 226848983 -23838871 - MIR SINE MIR 0 262 23 191 247 26 26 chr2 226850610 226850687 -23837167 + L2 LINE L2 2900 2976 -296 1958 113 28 3 chr2 226850695 226850986 -23836868 - AluSx SINE Alu -14 298 1 867 234 56 4 chr2 226851112 226851343 -23836511 + MIR SINE MIR 10 252 -10 197 349 77 57 chr2 226851612 226851821 -23836033 + MIR SINE MIR 34 246 -16 197 265 39 49 chr2 226852398 226852500 -23835354 - L2 LINE L2 -1 3271 3171 980 177 75 105 chr2 226853300 226853387 -23834467 - MER33 DNA MER1_type -2261 324 236 2181 108 0 3 chr2 226853387 226853692 -23834162 + AluSx SINE Alu 1 304 -8 980 177 75 105 chr2 226853692 226853938 -23833916 - MER33 DNA MER1_type -2349 236 1 193 281 0 62 chr2 226854047 226854143 -23833711 + L2 LINE L2 3173 3262 -10 534 253 71 40 chr2 226854607 226854832 -23833022 - L2 LINE L2 -1 3312 3081 231 167 0 24 chr2 226854911 226854953 -23832901 + Alu SINE Alu 172 212 -91 1053 90 0 0 chr2 226855055 226855189 -23832665 - AluSq/x SINE Alu -179 134 1 2631 269 90 6 chr2 226855196 226856037 -23831817 + L2 LINE L2 1210 2121 -1193 643 211 15 15 chr2 226856050 226856183 -23831671 - AluSq/x SINE Alu -179 134 2 289 181 223 0 chr2 226856183 226856277 -23831577 + L2 LINE L2 2096 2210 -1104 238 240 53 40 chr2 226856607 226856682 -23831172 - L2 LINE L2 -30 3283 3208 350 322 20 40 chr2 226856871 226857020 -23830834 - MER5A DNA MER1_type -1 188 43 * 471 301 30 8 chr2 226856899 226857032 -23830822 + MER5A DNA MER1_type 39 174 -15 2319 85 0 0 chr2 226857751 226858046 -23829808 - AluSx SINE Alu -17 295 1 310 356 89 7 chr2 226858070 226858205 -23829649 - L2 LINE L2 0 3272 3127 * 425 246 56 28 chr2 226858191 226858333 -23829521 - MIR SINE MIR 0 262 117 248 108 0 0 chr2 226858342 226858379 -23829475 + MER63 DNA MER1_type 3 39 -1022 711 196 0 43 chr2 226858379 226858517 -23829337 + FLAM_C SINE Alu 1 132 -1 1231 133 0 0 chr2 226858526 226858699 -23829155 + AluSx SINE Alu 3 175 -137 646 215 54 39 chr2 226858699 226858904 -23828950 + L2 LINE L2 2191 2398 -916 811 138 0 0 chr2 226858916 226859056 -23828798 + AluSx SINE Alu 167 306 0 648 206 30 8 chr2 226859059 226859190 -23828664 + MER63 DNA MER1_type 26 785 -277 358 229 24 0 chr2 226859246 226859329 -23828525 - MIR SINE MIR -177 85 1 1000 222 124 7 chr2 226859504 226859690 -23828164 - L1MD2 LINE L1 -12 6347 6184 793 109 170 24 chr2 226859690 226859798 -23828056 + MER53 DNA DNA 1 92 -97 2190 116 0 3 chr2 226859798 226860109 -23827745 - AluSx SINE Alu -2 310 1 793 109 170 24 chr2 226860109 226860165 -23827689 + MER53 DNA DNA 92 189 0 1000 222 124 7 chr2 226860165 226860426 -23827428 - L1MD2 LINE L1 -175 6184 5793 212 274 0 0 chr2 226860464 226860515 -23827339 - L2 LINE L2 -1 3312 3262 529 206 20 0 chr2 226860702 226860797 -23827057 - L2 LINE L2 -799 2515 2419 2690 139 48 24 chr2 226860797 226861166 -23826688 + LTR32 LTR ERVL 1 385 -86 2210 98 28 0 chr2 226861166 226861453 -23826401 + AluSx SINE Alu 1 295 -17 2690 139 48 24 chr2 226861453 226861543 -23826311 + LTR32 LTR ERVL 385 471 0 399 261 52 8 chr2 226861543 226861677 -23826177 - L2 LINE L2 -905 2409 2270 348 43 0 0 chr2 226862047 226862093 -23825761 + (CA)n Simple_repeat Simple_repeat 2 47 0 1875 137 22 4 chr2 226862244 226862521 -23825333 + AluJb SINE Alu 1 282 -30 491 254 10 104 chr2 226862577 226862770 -23825084 + MIR SINE MIR 88 262 0 786 173 23 15 chr2 226862919 226863052 -23824802 - AluJo SINE Alu -178 134 1 702 292 179 15 chr2 226863193 226863598 -23824256 + L2 LINE L2 2645 3173 -140 2124 126 10 3 chr2 226863598 226863922 -23823932 - AluSq SINE Alu 0 313 4 702 292 179 15 chr2 226863922 226864068 -23823786 + L2 LINE L2 3173 3294 -19 263 244 183 12 chr2 226864106 226864188 -23823666 + MIR SINE MIR 113 208 -54 2344 105 7 0 chr2 226864614 226864918 -23822936 + AluSg SINE Alu 1 306 -4 229 274 7 7 chr2 226865033 226865179 -23822675 + (TG)n Simple_repeat Simple_repeat 1 146 0 216 235 0 29 chr2 226865183 226865251 -23822603 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 2762 177 21 23 chr2 226865306 226865836 -23822018 - MLT1F LTR MaLR -13 529 1 185 247 12 0 chr2 226865840 226865921 -23821933 + (TG)n Simple_repeat Simple_repeat 2 83 0 * 262 235 8 8 chr2 226865908 226866027 -23821827 + (TATATG)n Simple_repeat Simple_repeat 2 120 0 461 241 25 25 chr2 226866053 226866215 -23821639 + (TATG)n Simple_repeat Simple_repeat 4 165 0 183 289 19 0 chr2 226866247 226866403 -23821451 + (TG)n Simple_repeat Simple_repeat 2 160 0 572 233 23 64 chr2 226867145 226867317 -23820537 + MER34 LTR ERV1 1 165 -377 812 206 0 0 chr2 226867405 226867541 -23820313 + AluJo SINE Alu 1 136 -176 1916 158 0 3 chr2 226867541 226867844 -23820010 + AluJb SINE Alu 1 302 -10 2177 127 0 16 chr2 226867844 226868151 -23819703 + AluSg SINE Alu 1 302 -8 279 0 0 0 chr2 226868261 226868292 -23819562 + (A)n Simple_repeat Simple_repeat 1 31 0 2119 198 89 68 chr2 226868292 226868534 -23819320 + MER31-int LTR ERV1 1358 1593 -3343 1684 193 29 13 chr2 226868534 226868840 -23819014 - AluJb SINE Alu -1 311 1 2119 198 89 68 chr2 226868840 226869391 -23818463 + MER31-int LTR ERV1 1593 2168 -2768 2252 95 0 0 chr2 226869400 226869704 -23818150 - AluSx SINE Alu 0 304 1 787 244 39 0 chr2 226869704 226869934 -23817920 - L1M4 LINE L1 -2120 4026 3788 1721 95 9 0 chr2 226869939 226870161 -23817693 + AluSq SINE Alu 84 307 -6 699 251 132 81 chr2 226870209 226870332 -23817522 - L1M4 LINE L1 -1334 4812 4697 682 221 0 0 chr2 226870332 226870454 -23817400 - FLAM_A SINE Alu -11 122 1 699 251 132 81 chr2 226870454 226870674 -23817180 - L1M4 LINE L1 -1449 4697 4490 2256 112 3 0 chr2 226870674 226870960 -23816894 + AluSx SINE Alu 1 287 -25 387 0 0 0 chr2 226870960 226871003 -23816851 + (CA)n Simple_repeat Simple_repeat 2 44 0 699 251 132 81 chr2 226871003 226871180 -23816674 - L1M4 LINE L1 -1656 4490 4324 2176 120 0 3 chr2 226871180 226871480 -23816374 + AluSc SINE Alu 1 299 -10 699 251 132 81 chr2 226871480 226871652 -23816202 - L1M4 LINE L1 -1822 4324 4081 1680 218 69 17 chr2 226871674 226872138 -23815716 - LTR16C LTR ERVL -3 488 1 1698 157 39 14 chr2 226872285 226872571 -23815283 + AluJb SINE Alu 2 294 -18 261 0 0 0 chr2 226872573 226872602 -23815252 + (CA)n Simple_repeat Simple_repeat 2 30 0 444 326 0 0 chr2 226872648 226872777 -23815077 - HERV16 LTR ERVL -3558 1438 1310 206 174 22 0 chr2 226872927 226872973 -23814881 + GA-rich Low_complexity Low_complexity 3 49 0 2231 118 3 10 chr2 226872981 226873295 -23814559 + AluSx SINE Alu 1 312 0 825 194 66 53 chr2 226873295 226873522 -23814332 + L1ME1 LINE L1 5928 6157 -9 448 240 8 8 chr2 226873522 226873647 -23814207 - AluSp/q SINE Alu -16 297 173 497 196 57 113 chr2 226874059 226874154 -23813700 - MER113 DNA MER1_type? -304 217 118 2187 125 0 0 chr2 226874154 226874451 -23813403 + AluSx SINE Alu 1 297 -15 497 196 57 113 chr2 226874451 226874585 -23813269 - MER113 DNA MER1_type? -403 118 1 2271 108 3 3 chr2 226874613 226874933 -23812921 - AluSp SINE Alu 0 313 1 4270 152 54 36 chr2 226874945 226875495 -23812359 - L1MB8 LINE L1 0 6178 5640 2302 120 0 0 chr2 226875495 226875794 -23812060 - AluSx SINE Alu -13 299 1 4270 152 54 36 chr2 226875794 226875967 -23811887 - L1MB8 LINE L1 -538 5640 5472 2372 109 0 0 chr2 226875967 226876270 -23811584 - AluSx SINE Alu -9 303 1 4270 152 54 36 chr2 226876270 226876412 -23811442 - L1MB8 LINE L1 -706 5472 5296 2147 131 0 0 chr2 226877751 226878042 -23809812 - AluSx SINE Alu -21 291 1 252 377 154 0 chr2 226878161 226878336 -23809518 - MIR SINE MIR -18 244 43 235 308 154 12 chr2 226879289 226879458 -23808396 + MIR SINE MIR 15 207 -55 1511 164 87 14 chr2 226879696 226879971 -23807883 + AluJo SINE Alu 1 295 -17 218 240 0 20 chr2 226880059 226880109 -23807745 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 531 312 67 9 chr2 226880442 226880887 -23806967 - L2 LINE L2 -257 3056 2560 884 310 23 33 chr2 226882613 226882734 -23805120 + LTR16C LTR ERVL 97 218 -273 2331 98 13 0 chr2 226882734 226883039 -23804815 + AluSq SINE Alu 1 309 -4 884 310 23 33 chr2 226883039 226883314 -23804540 + LTR16C LTR ERVL 218 489 -2 378 221 65 0 chr2 226883318 226883395 -23804459 - L2 LINE L2 -32 3281 3200 266 380 85 36 chr2 226883451 226883898 -23803956 + L2 LINE L2 2804 3272 0 2530 55 0 26 chr2 226884258 226884565 -23803289 - AluY SINE Alu -12 299 1 3773 111 0 4 chr2 226884818 226885331 -23802523 + MER9 LTR ERVK 1 511 0 1552 218 3 19 chr2 226885485 226885801 -23802053 + AluJo SINE Alu 1 311 -1 328 243 18 0 chr2 226885801 226885912 -23801942 + GA-rich Low_complexity Low_complexity 1 113 0 307 221 21 93 chr2 226885925 226885966 -23801888 + L2 LINE L2 1579 1621 -1693 2469 103 0 0 chr2 226885966 226886277 -23801577 + AluSx SINE Alu 1 311 -1 307 221 21 93 chr2 226886277 226886375 -23801479 + L2 LINE L2 1621 1708 -1606 455 320 26 62 chr2 226886451 226886760 -23801094 - LTR16C LTR ERVL 0 491 194 183 42 0 0 chr2 226887453 226887477 -23800377 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 381 256 103 104 chr2 226887482 226887734 -23800120 + L1MDb LINE L1 930 1181 -5215 2363 98 7 0 chr2 226887734 226888041 -23799813 + AluY SINE Alu 1 309 -2 381 256 103 104 chr2 226888041 226888215 -23799639 + L1MDb LINE L1 1181 1374 -5022 2066 144 10 7 chr2 226888215 226888520 -23799334 + AluJb SINE Alu 1 306 -6 381 256 103 104 chr2 226888520 226888565 -23799289 + L1MDb LINE L1 1374 1418 -4978 277 267 24 39 chr2 226888569 226888667 -23799187 + L1MDb LINE L1 1446 1544 -5043 2160 81 99 0 chr2 226888667 226888951 -23798903 + AluSq SINE Alu 1 312 -1 277 267 24 39 chr2 226888951 226889058 -23798796 + L1MDb LINE L1 1544 1648 -4939 2530 152 23 21 chr2 226889064 226889491 -23798363 + MSTC LTR MaLR 1 428 0 2420 91 0 0 chr2 226889522 226889820 -23798034 - AluY SINE Alu -13 298 1 241 268 0 47 chr2 226890040 226890167 -23797687 + G-rich Low_complexity Low_complexity 2 122 0 2071 104 0 4 chr2 226892354 226892632 -23795222 + AluSq SINE Alu 27 303 -10 205 254 0 32 chr2 226893312 226893375 -23794479 + CT-rich Low_complexity Low_complexity 5 65 0 204 326 11 45 chr2 226893426 226893515 -23794339 + MIR SINE MIR 46 131 -77 237 132 0 0 chr2 226893695 226893733 -23794121 + (A)n Simple_repeat Simple_repeat 1 38 0 777 252 183 21 chr2 226894469 226894759 -23793095 - MLT1J LTR MaLR -174 337 1 438 209 29 0 chr2 226895441 226895546 -23792308 + MER117 DNA MER1_type 41 148 -49 702 249 132 5 chr2 226895976 226896181 -23791673 + MIR SINE MIR 8 238 -24 180 0 0 0 chr2 226896333 226896353 -23791501 + (TG)n Simple_repeat Simple_repeat 2 21 0 328 196 0 113 chr2 226896368 226896429 -23791425 - L1MC4 LINE L1 -1339 6703 6637 6660 136 50 30 chr2 226896429 226896674 -23791180 - Tigger3b DNA MER2_type -1799 1229 990 2055 116 12 38 chr2 226896674 226896993 -23790861 + AluSx SINE Alu 1 311 -1 6660 136 50 30 chr2 226896993 226897245 -23790609 - Tigger3b DNA MER2_type -2038 990 744 2401 65 11 0 chr2 226897245 226897555 -23790299 - AluSg SINE Alu 0 313 1 6660 136 50 30 chr2 226897555 226897979 -23789875 - Tigger3b DNA MER2_type -2284 744 274 2326 108 3 0 chr2 226897979 226898285 -23789569 + AluSq SINE Alu 1 307 -6 6660 136 50 30 chr2 226898285 226898565 -23789289 - Tigger3b DNA MER2_type -2754 274 1 328 196 0 113 chr2 226898565 226898600 -23789254 - L1MC4 LINE L1 -1405 6637 6618 218 127 0 111 chr2 226898644 226898707 -23789147 - MIR3 SINE MIR -150 58 3 184 231 58 0 chr2 226898707 226898751 -23789103 + L2 LINE L2 3007 3053 -219 400 257 132 33 chr2 226898736 226899019 -23788835 - L2 LINE L2 -263 3050 2736 389 194 323 0 chr2 226899037 226899192 -23788662 - L1ME4a LINE L1 -16 6105 5901 2004 145 7 16 chr2 226899244 226899554 -23788300 - AluJo SINE Alu -5 307 1 275 377 7 0 chr2 226899591 226899745 -23788109 - L1MC4 LINE L1 -293 7749 7595 305 235 69 0 chr2 226899784 226899886 -23787968 - L1MC5 LINE L1 -542 7419 7311 2335 115 0 13 chr2 226899890 226900204 -23787650 - AluSx SINE Alu -2 310 1 384 251 105 101 chr2 226900413 226900632 -23787222 - L1MC5 LINE L1 -728 7233 7014 2131 142 0 0 chr2 226900680 226900990 -23786864 - AluSx SINE Alu -2 310 1 481 261 155 68 chr2 226901013 226901341 -23786513 - L1MC4 LINE L1 -833 7060 6762 2084 142 23 0 chr2 226901341 226901644 -23786210 + AluSx SINE Alu 1 310 -2 481 261 155 68 chr2 226901644 226901832 -23786022 - L1MC4 LINE L1 -1131 6762 6414 239 309 48 56 chr2 226901891 226902017 -23785837 - L2 LINE L2 -572 2742 2618 650 203 53 0 chr2 226902495 226902628 -23785226 + FLAM_C SINE Alu 2 141 -2 1974 128 7 24 chr2 226903531 226903828 -23784026 + AluSx SINE Alu 1 292 -20 2381 95 10 0 chr2 226903828 226904133 -23783721 + AluSp SINE Alu 1 308 -5 559 299 100 79 chr2 226904243 226904529 -23783325 + L1ME4a LINE L1 5629 5930 -191 2276 82 7 10 chr2 226904529 226904822 -23783032 + AluSx SINE Alu 1 292 -20 559 299 100 79 chr2 226904822 226905006 -23782848 + L1ME4a LINE L1 5930 6109 -12 239 256 105 41 chr2 226905033 226905205 -23782649 - L1ME4a LINE L1 -1993 5815 5633 * 316 260 39 55 chr2 226905194 226905321 -23782533 + L1ME1 LINE L1 5925 6049 -117 322 192 0 0 chr2 226905325 226905377 -23782477 - Tigger2a DNA MER2_type -363 71 20 2344 95 0 0 chr2 226905415 226905709 -23782145 + AluSg SINE Alu 1 294 -16 1592 160 87 25 chr2 226905709 226905916 -23781938 + Tigger2a DNA MER2_type 9 249 -2469 1680 180 7 0 chr2 226905916 226906194 -23781660 - AluJb SINE Alu -16 296 17 1592 160 87 25 chr2 226906194 226906342 -23781512 + Tigger2a DNA MER2_type 249 386 -58 2251 123 3 0 chr2 226906342 226906643 -23781211 + AluSp SINE Alu 1 302 -11 1492 123 41 0 chr2 226906645 226906865 -23780989 - MER30 DNA MER1_type -1 229 1 684 271 143 0 chr2 226906866 226907110 -23780744 - L2 LINE L2 -2094 1220 942 2258 112 0 3 chr2 226907112 226907406 -23780448 + AluSx SINE Alu 1 293 -19 1196 124 0 6 chr2 226907407 226907576 -23780278 + AluSg/x SINE Alu 132 299 -11 449 296 170 0 chr2 226908088 226908223 -23779631 - MER5A DNA MER1_type -23 166 9 1622 189 40 11 chr2 226908248 226908598 -23779256 - MER63 DNA MER1_type -1 1059 700 1204 194 214 6 chr2 226908607 226908967 -23778887 - LTR47A LTR ERVL -15 437 3 238 251 37 74 chr2 226908967 226909064 -23778790 - L1ME4a LINE L1 -2282 5526 5436 1886 120 88 7 chr2 226909064 226909348 -23778506 - AluSg SINE Alu -3 307 1 238 251 37 74 chr2 226909348 226909413 -23778441 - L1ME4a LINE L1 -2372 5436 5370 302 335 151 18 chr2 226909504 226909788 -23778066 - L1ME4a LINE L1 -1780 4366 4045 304 103 0 0 chr2 226909788 226909840 -23778014 - Alu SINE Alu -256 46 2 2436 82 0 10 chr2 226910070 226910374 -23777480 - AluSx SINE Alu -11 301 1 234 197 28 70 chr2 226910782 226910853 -23777001 + MIR SINE MIR 54 122 -86 504 313 71 36 chr2 226910931 226911155 -23776699 + MIR SINE MIR 28 259 -3 376 281 75 65 chr2 227111979 227112178 -23575676 - MIR SINE MIR -6 256 56 265 312 200 29 chr2 227112816 227112986 -23574868 + MIR3 SINE MIR 8 206 -2 488 165 0 58 chr2 227115439 227115542 -23572312 - L1M3 LINE L1 -593 5578 5482 1898 100 33 60 chr2 227115727 227116058 -23571796 - THE1C LTR MaLR -53 322 1 486 308 30 18 chr2 227116303 227116472 -23571382 + MER5A DNA MER1_type 17 187 -2 21 0 0 0 chr2 227116677 227116698 -23571156 + AT_rich Low_complexity Low_complexity 1 21 0 254 150 0 17 chr2 227116734 227116794 -23571060 + (TTTTG)n Simple_repeat Simple_repeat 1 59 0 524 211 31 98 chr2 227117413 227117500 -23570354 + MER113 DNA MER1_type? 233 301 -220 2059 97 0 4 chr2 227117500 227117768 -23570086 + AluSx SINE Alu 39 305 -7 524 211 31 98 chr2 227117768 227117874 -23569980 + MER113 DNA MER1_type? 301 413 -108 604 274 36 0 chr2 227118430 227118598 -23569256 + MER5B DNA MER1_type 2 175 -3 315 316 17 17 chr2 227118599 227118716 -23569138 + MER5A DNA MER1_type 70 186 -3 * 317 359 77 6 chr2 227118716 227118871 -23568983 - MIR3 SINE MIR -37 171 4 2243 80 0 10 chr2 227119868 227120156 -23567698 + AluY SINE Alu 18 302 -9 3517 164 32 19 chr2 227120205 227120835 -23567019 + L1MB8 LINE L1 5536 6173 -5 1949 105 6 96 chr2 227120836 227121160 -23566694 - AluSq SINE Alu -16 297 3 437 243 198 11 chr2 227121205 227121382 -23566472 + MIR SINE MIR 53 262 0 21 0 0 0 chr2 227121453 227121474 -23566380 + AT_rich Low_complexity Low_complexity 1 21 0 202 261 102 102 chr2 227122126 227122302 -23565552 + L2 LINE L2 3085 3260 -12 1906 161 3 3 chr2 227122787 227123085 -23564769 + AluJb SINE Alu 1 298 -14 214 216 235 59 chr2 227123140 227123242 -23564612 + MIR SINE MIR 32 151 -111 1021 241 52 70 chr2 227123261 227123701 -23564153 + MLT1J1 LTR MaLR 1 432 -14 22 35 0 0 chr2 227123789 227123818 -23564036 + AT_rich Low_complexity Low_complexity 1 29 0 497 16 16 0 chr2 227125567 227125591 -23562263 + (TA)n Simple_repeat Simple_repeat 1 87 0 497 16 16 0 chr2 227125591 227125653 -23562201 + (TA)n Simple_repeat Simple_repeat 2 64 0 26 30 0 0 chr2 227126049 227126082 -23561772 + AT_rich Low_complexity Low_complexity 1 33 0 701 182 0 15 chr2 227127051 227127183 -23560671 + MLT1C LTR MaLR 338 467 0 375 256 34 62 chr2 227128420 227128596 -23559258 - MARNA DNA Mariner -22 564 394 1048 163 74 11 chr2 227128728 227128918 -23558936 + MER20 DNA MER1_type 16 217 -2 586 228 38 28 chr2 227130014 227130181 -23557673 - MLT1A1 LTR MaLR 0 365 248 1323 197 29 0 chr2 227130255 227130494 -23557360 - MLT1A1 LTR MaLR -119 246 1 1020 233 98 41 chr2 227130615 227131072 -23556782 + MLT1F1 LTR MaLR 1 565 -2 237 158 0 123 chr2 227131493 227131550 -23556304 - L2 LINE L2 -3 3310 3261 1993 137 3 29 chr2 227131665 227131980 -23555874 + AluSx SINE Alu 1 307 -5 474 321 7 29 chr2 227132293 227132430 -23555424 - L2 LINE L2 0 3272 3139 434 281 76 18 chr2 227132704 227132875 -23554979 - MIR3 SINE MIR -7 201 21 242 181 14 97 chr2 227133646 227133718 -23554136 - L2 LINE L2 -1 3271 3206 183 373 60 0 chr2 227134152 227134219 -23553635 + L2 LINE L2 3103 3173 -99 741 259 35 10 chr2 227134364 227134561 -23553293 + MIR SINE MIR 5 206 -56 288 363 35 0 chr2 227134924 227135037 -23552817 + L2 LINE L2 3193 3309 -4 2479 95 35 9 chr2 227135127 227135473 -23552381 - THE1A LTR MaLR 0 355 1 2997 62 5 0 chr2 227135473 227135844 -23552010 - THE1A-int LTR MaLR 0 1580 1208 296 219 31 31 chr2 227137312 227137408 -23550446 - MLT1J LTR MaLR 0 511 416 1547 155 68 18 chr2 227137416 227137694 -23550160 + AluJo SINE Alu 1 292 -20 26 50 0 0 chr2 227137694 227137734 -23550120 + AT_rich Low_complexity Low_complexity 1 40 0 192 40 0 0 chr2 227137806 227137831 -23550023 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 491 281 145 45 chr2 227137875 227138185 -23549669 - MLT1J LTR MaLR -102 409 69 1497 235 50 5 chr2 227138292 227138705 -23549149 + L1MC4 LINE L1 7504 8042 0 1722 148 41 0 chr2 227139965 227140235 -23547619 - Tigger5 DNA MER2_type 0 2323 2043 830 206 88 25 chr2 227141405 227141609 -23546245 + MIR SINE MIR 46 262 0 275 268 119 72 chr2 227142749 227142943 -23544911 + MIR SINE MIR 20 222 -40 628 291 18 6 chr2 227143011 227143176 -23544678 + MIR3 SINE MIR 15 181 -27 24 53 0 0 chr2 227143236 227143274 -23544580 + AT_rich Low_complexity Low_complexity 1 38 0 1890 220 8 6 chr2 227144476 227144840 -23543014 - MLT1A1 LTR MaLR 0 365 1 2133 142 0 0 chr2 227145192 227145548 -23542306 - AluJb SINE Alu 0 356 1 1866 265 90 44 chr2 227145860 227146748 -23541106 - L1MEd LINE L1 -5189 930 2 1611 208 27 12 chr2 227146910 227147246 -23540608 - MER58B DNA MER1_type 0 341 1 299 370 0 37 chr2 227147255 227147417 -23540437 + MER5B DNA MER1_type 6 161 -17 204 40 0 0 chr2 227147654 227147679 -23540175 + (CA)n Simple_repeat Simple_repeat 1 25 0 639 266 101 14 chr2 227148282 227148579 -23539275 + L1ME4a LINE L1 5724 6046 -75 382 333 36 26 chr2 227150274 227150469 -23537385 + MIR3 SINE MIR 3 199 -9 443 266 129 50 chr2 227152097 227152338 -23535516 + MIR SINE MIR 3 262 0 729 273 52 39 chr2 227154311 227154619 -23533235 + MLT1L LTR MaLR 8 319 -296 295 265 132 53 chr2 227154672 227154861 -23532993 + MLT1L LTR MaLR 377 607 -8 2515 70 0 0 chr2 227155456 227155758 -23532096 - AluY SINE Alu -9 302 1 527 273 81 12 chr2 227155851 227156064 -23531790 - MIR SINE MIR 0 262 30 1119 289 56 24 chr2 227157489 227157898 -23529956 - LTR16A LTR ERVL -11 439 18 898 321 59 54 chr2 227158010 227158673 -23529181 - HERV16 LTR ERVL -348 5416 4751 3486 299 81 45 chr2 227158693 227161938 -23525916 - HERV16 LTR ERVL -1905 3091 1 392 349 8 0 chr2 227162068 227162197 -23525657 - LTR16A LTR ERVL -170 280 151 824 291 133 28 chr2 227162519 227162948 -23524906 + L2 LINE L2 2840 3313 0 375 235 59 29 chr2 227163519 227163620 -23524234 + MIR SINE MIR 40 143 -65 326 294 100 16 chr2 227163620 227163804 -23524050 + MIR3 SINE MIR 1 200 -8 240 239 80 53 chr2 227164848 227164961 -23522893 - LTR67 LTR ERVL -14 543 428 637 303 27 5 chr2 227165025 227165210 -23522644 - MIR SINE MIR -21 241 53 345 335 59 6 chr2 227165656 227165826 -23522028 + MIR3 SINE MIR 20 198 -10 2376 99 0 0 chr2 227165960 227166263 -23521591 + AluSx SINE Alu 1 303 -9 1837 210 31 24 chr2 227166818 227167311 -23520543 + MLT1D LTR MaLR 7 362 -3 23 78 0 0 chr2 227167800 227167851 -23520003 + AT_rich Low_complexity Low_complexity 1 51 0 2787 241 61 6 chr2 227168363 227169052 -23518802 + MER69 DNA AcHobo 81 807 -1719 590 213 154 15 chr2 227169051 227169380 -23518474 + MER69 DNA AcHobo 2017 2470 -56 * 474 311 174 16 chr2 227169649 227169839 -23518015 + MIR SINE MIR 43 262 0 195 69 0 0 chr2 227170473 227170502 -23517352 + (T)n Simple_repeat Simple_repeat 1 29 0 573 355 43 0 chr2 227170872 227171151 -23516703 + MER102b DNA MER1_type 1 291 -50 2470 172 82 25 chr2 227171228 227171798 -23516056 - Charlie1 DNA MER1_type -1 2760 2158 329 292 50 8 chr2 227172014 227172134 -23515720 - MIR SINE MIR -48 214 90 1111 215 23 9 chr2 227172172 227172386 -23515468 + MER58A DNA MER1_type 2 218 -6 2098 147 37 114 chr2 227172418 227172906 -23514948 + MER73 LTR ERVL 1 450 -194 467 71 0 0 chr2 227172906 227172962 -23514892 - THE1C LTR MaLR 0 375 320 7816 31 0 0 chr2 227172962 227173928 -23513926 - L1PA4 LINE L1 -3 6152 5177 8632 27 0 1 chr2 227173928 227174926 -23512928 + L1P LINE L1 4087 5083 -1063 2534 80 3 12 chr2 227174926 227175264 -23512590 - THE1C LTR MaLR -40 335 1 857 212 35 39 chr2 227175264 227175462 -23512392 + MER73 LTR ERVL 448 644 0 283 384 30 8 chr2 227175923 227176056 -23511798 - L2 LINE L2 -5 3267 3132 192 340 235 0 chr2 227176307 227176460 -23511394 - MIR SINE MIR -21 241 53 241 333 22 67 chr2 227177093 227177228 -23510626 + MER91B DNA MER1_type 2 130 -60 1574 141 176 10 chr2 227177245 227177535 -23510319 + MER44D DNA MER2_type 1 608 -1 216 281 34 22 chr2 227177538 227177627 -23510227 + MER91B DNA MER1_type 93 182 -8 743 152 18 12 chr2 227177774 227177939 -23509915 + GA-rich Low_complexity Low_complexity 3 168 0 280 281 92 60 chr2 227178019 227178204 -23509650 - MLT1I LTR MaLR -121 288 98 1139 226 0 0 chr2 227178501 227178696 -23509158 - MER58A DNA MER1_type -21 203 9 183 156 0 0 chr2 227178721 227178753 -23509101 + (TA)n Simple_repeat Simple_repeat 2 33 0 741 199 136 51 chr2 227178765 227179001 -23508853 - MLT1H1 LTR MaLR -10 545 290 2949 165 29 48 chr2 227179132 227179911 -23507943 - MER21A LTR ERV1 0 931 18 24 0 0 0 chr2 227179911 227179935 -23507919 + AT_rich Low_complexity Low_complexity 1 24 0 279 0 0 0 chr2 227182719 227182750 -23505104 + (TG)n Simple_repeat Simple_repeat 1 31 0 623 249 146 26 chr2 227183218 227183244 -23504610 - MIR SINE MIR 0 262 241 1478 222 98 18 chr2 227183244 227183582 -23504272 + MLT1A1 LTR MaLR 1 365 0 623 249 146 26 chr2 227183582 227183788 -23504066 - MIR SINE MIR -21 241 2 367 228 228 7 chr2 227185099 227185235 -23502619 + MIR SINE MIR 18 183 -79 841 298 152 11 chr2 227185244 227185691 -23502163 - LTR33 LTR ERVL -10 511 2 389 246 105 21 chr2 227185891 227186045 -23501809 + MIR3 SINE MIR 35 200 -8 310 336 70 8 chr2 227187031 227187159 -23500695 + L2 LINE L2 3136 3271 -1 433 290 16 72 chr2 227187616 227187665 -23500189 - MIR3 SINE MIR -6 202 152 911 203 34 24 chr2 227187665 227187872 -23499982 - MER3 DNA MER1_type 0 209 1 433 290 16 72 chr2 227187872 227188015 -23499839 - MIR3 SINE MIR -56 152 21 186 133 0 0 chr2 227189350 227189380 -23498474 + (A)n Simple_repeat Simple_repeat 1 30 0 341 226 123 14 chr2 227189544 227189689 -23498165 - MIR3 SINE MIR -12 196 28 280 241 222 37 chr2 227190473 227190689 -23497165 + LTR16A1 LTR ERVL 201 456 -1 311 169 0 90 chr2 227190837 227190926 -23496928 + MER117 DNA MER1_type 117 197 0 2273 245 58 21 chr2 227191609 227192218 -23495636 - L1ME3 LINE L1 -116 6046 5416 521 182 145 31 chr2 227193028 227193187 -23494667 + MIR3 SINE MIR 32 208 0 498 282 65 19 chr2 227193800 227194016 -23493838 + L2 LINE L2 3083 3308 -5 725 257 188 25 chr2 227194029 227194357 -23493497 - L2 LINE L2 -147 3166 2892 1017 243 37 5 chr2 227194357 227194571 -23493283 + MER58A DNA MER1_type 3 223 -1 725 257 188 25 chr2 227194571 227194762 -23493092 - L2 LINE L2 -421 2892 2580 408 243 78 36 chr2 227195552 227195705 -23492149 + MIR SINE MIR 34 191 -53 332 307 45 68 chr2 227195802 227195978 -23491876 + MIR SINE MIR 71 242 -20 327 200 130 0 chr2 227196509 227196609 -23491245 + MIR SINE MIR 92 204 -58 1705 163 3 14 chr2 227197272 227197566 -23490288 + AluJb SINE Alu 1 291 -21 180 77 0 0 chr2 227197980 227198006 -23489848 + (CAG)n Simple_repeat Simple_repeat 2 27 0 213 320 13 0 chr2 227198018 227198096 -23489758 - MIR SINE MIR -11 251 173 354 227 47 117 chr2 227198112 227198535 -23489319 + MLT1I LTR MaLR 5 578 -12 420 310 9 15 chr2 227198535 227198682 -23489172 - MIR SINE MIR -68 140 16 774 249 106 54 chr2 227199625 227200011 -23487843 - MLT1J LTR MaLR -5 506 101 2788 102 8 6 chr2 227200023 227200386 -23487468 - THE1B LTR MaLR 0 364 1 955 210 60 128 chr2 227201669 227202084 -23485770 - MLT1B LTR MaLR -3 387 1 21 0 0 0 chr2 227202100 227202121 -23485733 + AT_rich Low_complexity Low_complexity 1 21 0 371 326 30 15 chr2 227202262 227202397 -23485457 + MIR3 SINE MIR 24 160 -48 833 159 0 8 chr2 227202565 227202691 -23485163 + FLAM_A SINE Alu 2 126 -7 481 265 123 60 chr2 227202736 227203136 -23484718 - MLT1H LTR MaLR -25 524 100 865 207 173 10 chr2 227203198 227203498 -23484356 - MER113 DNA MER1_type? -172 349 1 2175 148 30 15 chr2 227203900 227204232 -23483622 - MER1B DNA MER1_type 0 337 1 302 316 70 12 chr2 227204242 227204413 -23483441 + MARNA DNA Mariner 154 334 -252 279 276 55 68 chr2 227204439 227204602 -23483252 - MARNA DNA Mariner -396 190 30 598 161 11 0 chr2 227205176 227205263 -23482591 + AluJ/FLAM SINE Alu 2 89 -223 255 103 0 0 chr2 227205263 227205302 -23482552 + L1PA16 LINE L1 5935 5973 -193 1543 149 0 131 chr2 227205302 227205652 -23482202 + AluJo SINE Alu 1 304 -8 2035 241 17 17 chr2 227205802 227206267 -23481587 - LTR40c LTR ERVL 0 465 1 814 150 0 43 chr2 227207322 227207462 -23480392 + AluJo SINE Alu 1 134 -178 447 19 0 0 chr2 227207475 227207527 -23480327 + (TA)n Simple_repeat Simple_repeat 2 53 0 1238 130 74 96 chr2 227207660 227207747 -23480107 + L1PA16 LINE L1 5887 5974 -192 1759 168 10 7 chr2 227207747 227208044 -23479810 + AluSx SINE Alu 1 298 -14 1238 130 74 96 chr2 227208044 227208226 -23479628 + L1PA16 LINE L1 5974 6150 -16 2301 85 0 7 chr2 227208229 227208524 -23479330 - AluSg SINE Alu -17 293 1 280 245 112 10 chr2 227209156 227209254 -23478600 + L1MC5 LINE L1 7673 7780 -181 409 211 0 0 chr2 227209337 227209413 -23478441 - MER58 DNA MER1_type -2182 238 163 2281 85 3 10 chr2 227209413 227209708 -23478146 - AluSx SINE Alu -19 293 1 2049 137 0 16 chr2 227209711 227210018 -23477836 - AluJo SINE Alu -10 302 1 521 217 0 0 chr2 227210018 227210101 -23477753 - MER58 DNA MER1_type -258 83 1 1934 190 108 42 chr2 227210173 227210646 -23477208 - MLT1D LTR MaLR -1 504 1 1068 154 23 6 chr2 227210907 227211082 -23476772 + AluJo SINE Alu 124 301 -11 466 333 79 0 chr2 227211609 227211774 -23476080 + MER91A DNA MER1_type 1 178 -18 1179 163 59 135 chr2 227212209 227212601 -23475253 - MLT1A1 LTR MaLR -2 363 2 1158 274 82 8 chr2 227212625 227212979 -23474875 + MLT1I LTR MaLR 30 409 0 241 314 136 0 chr2 227214083 227214201 -23473653 - MIR3 SINE MIR -8 200 67 2261 119 40 6 chr2 227215316 227215668 -23472186 - THE1B LTR MaLR 0 364 1 2854 77 0 8 chr2 227216503 227216881 -23470973 + THE1C LTR MaLR 1 375 0 531 323 74 41 chr2 227217290 227217752 -23470102 + HAL1b LINE L1 341 817 -531 393 263 41 119 chr2 227218177 227218497 -23469357 + L1ME4a LINE L1 5720 6014 -107 759 204 35 12 chr2 227218600 227218772 -23469082 - MER58A DNA MER1_type 0 224 49 867 172 104 16 chr2 227218896 227219088 -23468766 + MER3 DNA MER1_type 1 209 0 219 303 30 0 chr2 227219284 227219350 -23468504 - L2 LINE L2 0 3272 3205 2128 122 21 0 chr2 227219492 227219780 -23468074 + AluSg SINE Alu 1 294 -16 1642 184 11 7 chr2 227219786 227220069 -23467785 + AluJo SINE Alu 1 284 -28 426 229 0 0 chr2 227220092 227220175 -23467679 + AluJ/FRAM SINE Alu 214 296 -16 25 31 0 0 chr2 227220179 227220211 -23467643 + AT_rich Low_complexity Low_complexity 1 32 0 231 250 17 0 chr2 227220577 227220637 -23467217 - L1ME2 LINE L1 -57 6107 6047 1193 210 76 0 chr2 227220647 227220937 -23466917 + MER58B DNA MER1_type 28 339 -2 2203 217 82 28 chr2 227220941 227221614 -23466240 - L1ME2 LINE L1 -115 6049 5341 248 266 159 52 chr2 227221926 227222159 -23465695 - L2 LINE L2 -44 3228 2971 427 186 47 39 chr2 227222337 227222466 -23465388 - MLT1H LTR MaLR -399 150 21 324 261 59 34 chr2 227223461 227223580 -23464274 - L2 LINE L2 -8 3305 3184 2655 104 59 26 chr2 227224000 227224620 -23463234 - LTR8A LTR ERV1 0 727 1 249 229 102 68 chr2 227226049 227226167 -23461687 - MIR3 SINE MIR -74 134 13 1397 212 133 83 chr2 227226253 227226999 -23460855 - LTR1B LTR ERV1 -42 784 2 412 302 156 14 chr2 227227020 227227232 -23460622 - MIR SINE MIR 0 262 21 3913 166 32 27 chr2 227227314 227227480 -23460374 - LTR39 LTR ERV1 -1 782 618 1386 97 116 5 chr2 227227480 227227576 -23460278 + MER30 DNA MER1_type 1 85 -145 192 40 0 0 chr2 227227576 227227601 -23460253 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 1386 97 116 5 chr2 227227601 227227711 -23460143 + MER30 DNA MER1_type 85 230 0 3913 166 32 27 chr2 227227711 227228322 -23459532 - LTR39 LTR ERV1 -165 618 1 371 168 81 37 chr2 227229111 227229229 -23458625 - MIR3 SINE MIR -48 160 38 457 264 87 52 chr2 227229266 227229303 -23458551 + MER102b DNA MER1_type 84 118 -1310 3268 124 75 16 chr2 227229303 227229876 -23457978 + L1MB3 LINE L1 5576 6182 -1 457 264 87 52 chr2 227229876 227230069 -23457785 + MER102b DNA MER1_type 118 322 -19 564 113 21 10 chr2 227230089 227230186 -23457668 + MER4A LTR ERV1 1 98 -566 1248 113 75 144 chr2 227230186 227230557 -23457297 + MER4A LTR ERV1 261 664 0 577 249 6 48 chr2 227230557 227230722 -23457132 + MER5B DNA MER1_type 19 176 -2 626 245 58 0 chr2 227230741 227230896 -23456958 - MER5B DNA MER1_type -14 164 1 2386 156 129 10 chr2 227231042 227231537 -23456317 - LTR64 LTR ERVK 0 558 5 294 29 0 0 chr2 227231542 227231577 -23456277 + (CA)n Simple_repeat Simple_repeat 2 36 0 311 44 22 0 chr2 227231634 227231679 -23456175 + (CA)n Simple_repeat Simple_repeat 1 46 0 216 233 194 10 chr2 227231842 227231945 -23455909 - MIR SINE MIR -14 248 127 506 217 17 0 chr2 227231945 227232060 -23455794 + MARNA DNA Mariner 461 577 -9 1997 253 50 75 chr2 227233331 227234307 -23453547 + L1ME LINE L1 19 1018 -5140 2318 103 0 0 chr2 227234307 227234598 -23453256 + AluY SINE Alu 1 291 -20 1997 253 50 75 chr2 227234598 227234617 -23453237 + L1ME LINE L1 1018 1036 -5122 1777 172 0 4 chr2 227234617 227234896 -23452958 + AluJb SINE Alu 16 293 -19 1997 253 50 75 chr2 227234896 227234989 -23452865 + L1ME LINE L1 1036 1130 -5028 1883 141 25 0 chr2 227234989 227235266 -23452588 + AluSx SINE Alu 5 288 -24 1997 253 50 75 chr2 227235266 227235353 -23452501 + L1ME LINE L1 1130 1218 -4940 2412 103 0 0 chr2 227235353 227235664 -23452190 + AluY SINE Alu 1 311 0 1997 253 50 75 chr2 227235664 227236171 -23451683 + L1ME LINE L1 1218 1707 -4451 523 241 68 32 chr2 227236445 227236665 -23451189 + L1ME2 LINE L1 5652 5879 -285 468 181 13 110 chr2 227236745 227236784 -23451070 + L1ME2 LINE L1 6015 6056 -108 2501 71 0 3 chr2 227236784 227237095 -23450759 - AluY SINE Alu -1 310 1 468 181 13 110 chr2 227237095 227237210 -23450644 + L1ME2 LINE L1 6056 6154 -10 1743 182 17 7 chr2 227237221 227237518 -23450336 + AluJo SINE Alu 1 300 -12 2102 112 49 26 chr2 227237640 227237989 -23449865 - THE1B LTR MaLR 0 364 8 1820 206 111 15 chr2 227238053 227238514 -23449340 + MLT1D LTR MaLR 1 505 0 572 79 0 0 chr2 227239029 227239105 -23448749 + MADE1 DNA Mariner 3 78 -2 590 228 7 20 chr2 227240341 227240490 -23447364 - L1ME LINE L1 -464 5702 5556 1959 200 157 6 chr2 227240520 227240819 -23447035 - L1ME1 LINE L1 -5 6161 5908 1757 173 0 36 chr2 227240819 227241126 -23446728 - AluJb SINE Alu -16 296 1 1959 200 157 6 chr2 227241126 227241478 -23446376 - L1ME1 LINE L1 -258 5908 5376 314 353 8 17 chr2 227244107 227244226 -23443628 - MIR3 SINE MIR -6 202 85 542 247 77 24 chr2 227244271 227244441 -23443413 - MIR SINE MIR -21 241 63 431 161 172 0 chr2 227245002 227245095 -23442759 - FRAM SINE Alu -1 175 67 816 234 63 17 chr2 227245211 227245450 -23442404 + MIR SINE MIR 2 251 -11 288 317 19 0 chr2 227246117 227246221 -23441633 - MIR3 SINE MIR -2 206 101 378 322 44 39 chr2 227246284 227246464 -23441390 - MER5A DNA MER1_type 0 189 9 2001 201 144 44 chr2 227246861 227247701 -23440153 + L1ME2 LINE L1 3870 4793 -1353 5841 163 39 112 chr2 227247713 227248973 -23438881 + L1 LINE L1 2683 3757 -2389 475 62 0 0 chr2 227248973 227249037 -23438817 + L1PA7 LINE L1 6080 6143 -11 5841 163 39 112 chr2 227249037 227249684 -23438170 + L1 LINE L1 3757 4450 -1696 1252 219 91 7 chr2 227249714 227250220 -23437634 + L1ME2 LINE L1 5122 5652 -512 1028 212 81 58 chr2 227250231 227250576 -23437278 - MLT1A1 LTR MaLR -12 353 1 7880 207 25 43 chr2 227250576 227252343 -23435511 - MLT1A1-int LTR MaLR 0 1735 1 941 211 68 36 chr2 227252343 227252694 -23435160 - MLT1A1 LTR MaLR 0 428 1 1632 226 56 11 chr2 227252732 227253197 -23434657 + L1ME2 LINE L1 5673 6158 -6 294 29 0 0 chr2 227253201 227253236 -23434618 + (TTA)n Simple_repeat Simple_repeat 2 36 0 40851 32 22 1 chr2 227253236 227259256 -23428598 - L1PA2 LINE L1 -5 6150 1 455 218 36 0 chr2 227259321 227259431 -23428423 + LTR16C LTR ERVL 366 479 -12 180 77 0 0 chr2 227259610 227259636 -23428218 + (TGGG)n Simple_repeat Simple_repeat 4 29 0 1693 119 48 31 chr2 227259784 227260078 -23427776 + MSTB LTR MaLR 1 299 -127 23 33 0 0 chr2 227260093 227260123 -23427731 + AT_rich Low_complexity Low_complexity 1 30 0 213 211 0 0 chr2 227260126 227260164 -23427690 + (CATA)n Simple_repeat Simple_repeat 1 38 0 233 314 57 9 chr2 227260247 227260476 -23427378 + L1 LINE L1 3064 3303 -2843 195 254 143 0 chr2 227261680 227261743 -23426111 - MIR SINE MIR -113 149 78 29 28 0 0 chr2 227262089 227262125 -23425729 + AT_rich Low_complexity Low_complexity 1 36 0 216 0 0 0 chr2 227262125 227262149 -23425705 + (TG)n Simple_repeat Simple_repeat 2 25 0 1925 195 65 51 chr2 227262475 227263009 -23424845 - LTR55 LTR ERV -6 542 1 351 0 0 0 chr2 227263322 227263361 -23424493 + (CA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr2 227264450 227264471 -23423383 + AT_rich Low_complexity Low_complexity 1 21 0 1879 169 39 29 chr2 227265056 227265441 -23422413 - MLT1B LTR MaLR -1 389 1 578 257 158 22 chr2 227265531 227265753 -23422101 - MLT1J LTR MaLR -2 509 258 457 294 101 34 chr2 227265748 227265986 -23421868 - MLT1K LTR MaLR -187 401 148 * 2252 106 0 7 chr2 227266062 227266364 -23421490 + AluSg SINE Alu 1 300 -10 287 305 78 21 chr2 227266412 227266553 -23421301 - MIR SINE MIR -111 151 3 228 269 77 0 chr2 227266876 227266954 -23420900 - MER103 DNA DNA -47 119 36 287 366 15 0 chr2 227267098 227267229 -23420625 - MIR3 SINE MIR -48 160 28 23 0 0 0 chr2 227267282 227267305 -23420549 + AT_rich Low_complexity Low_complexity 1 23 0 225 313 0 15 chr2 227267607 227267674 -23420180 - L2 LINE L2 -6 3307 3242 217 361 83 35 chr2 227267692 227267861 -23419993 - L2 LINE L2 -8 3264 3088 503 199 61 77 chr2 227268031 227268212 -23419642 - MER5B DNA MER1_type 0 178 1 449 348 27 0 chr2 227268694 227268878 -23418976 - MIR SINE MIR -21 241 53 550 217 62 0 chr2 227269169 227269298 -23418556 + MER5A DNA MER1_type 51 187 -2 180 0 0 0 chr2 227271061 227271081 -23416773 + (A)n Simple_repeat Simple_repeat 1 20 0 403 135 0 54 chr2 227271335 227271409 -23416445 + MER5A DNA MER1_type 1 70 -119 182 352 124 0 chr2 227271546 227271651 -23416203 + MIR3 SINE MIR 2 119 -89 791 193 29 12 chr2 227271667 227271838 -23416016 - MER5B DNA MER1_type -3 175 2 1270 237 100 21 chr2 227273318 227273787 -23414067 + MLT1J LTR MaLR 5 510 -1 354 269 186 0 chr2 227273796 227273941 -23413913 - MIR3 SINE MIR -1 207 36 2070 136 3 0 chr2 227273968 227274262 -23413592 - AluSx SINE Alu -15 297 3 207 0 0 0 chr2 227275118 227275141 -23412713 + (CA)n Simple_repeat Simple_repeat 2 24 0 2296 91 3 3 chr2 227275504 227275800 -23412054 - AluSx SINE Alu -16 296 1 375 287 127 13 chr2 227276329 227276486 -23411368 - MIR SINE MIR -52 210 36 1987 107 0 15 chr2 227276531 227276803 -23411051 + AluSx SINE Alu 34 301 -11 191 231 19 0 chr2 227278334 227278386 -23409468 - L2 LINE L2 0 3313 3261 695 258 178 19 chr2 227278766 227279250 -23408604 + L2 LINE L2 2749 3311 -2 42186 37 5 1 chr2 227280050 227285073 -23402781 + L1P LINE L1 1 5042 -1104 368 250 38 45 chr2 227285340 227285472 -23402382 - MIR SINE MIR -130 132 2 428 233 151 38 chr2 227286214 227286239 -23401615 + MER5A DNA MER1_type 4 25 -164 1674 214 50 18 chr2 227286239 227286640 -23401214 + MLT2D LTR ERVL 1 414 0 428 233 151 38 chr2 227286640 227286773 -23401081 + MER5A DNA MER1_type 25 180 -9 227 282 28 14 chr2 227286782 227286853 -23401001 - MIR3 SINE MIR -48 160 89 451 263 45 13 chr2 227286889 227287045 -23400809 - MIR SINE MIR -51 211 51 1174 200 37 0 chr2 227287080 227287295 -23400559 - MER58A DNA MER1_type 0 224 2 308 24 24 0 chr2 227289304 227289345 -23398509 + (CA)n Simple_repeat Simple_repeat 2 43 0 455 229 18 0 chr2 227289607 227289716 -23398138 - MER103 DNA DNA -53 113 3 649 260 87 5 chr2 227291396 227291592 -23396262 + MIR SINE MIR 51 262 0 227 281 45 45 chr2 227291758 227291847 -23396007 - MIR SINE MIR -161 101 13 2180 124 48 25 chr2 227293523 227293879 -23393975 + THE1B LTR MaLR 1 364 0 475 99 99 0 chr2 227295421 227295492 -23392362 - MADE1 DNA Mariner 0 80 3 205 283 50 42 chr2 227295710 227295830 -23392024 - MIR SINE MIR -79 183 63 370 244 43 35 chr2 227296272 227296387 -23391467 + L2 LINE L2 3155 3270 -2 366 251 51 51 chr2 227296432 227296627 -23391227 + MIR SINE MIR 22 214 -48 1747 203 120 2 chr2 227297362 227297780 -23390074 + MLT1C LTR MaLR 1 467 0 337 96 0 39 chr2 227298040 227298092 -23389762 - MADE1 DNA Mariner -30 50 1 195 316 34 51 chr2 227298803 227298920 -23388934 + L2 LINE L2 2948 3062 -210 264 250 113 0 chr2 227301004 227301084 -23386770 - MIR SINE MIR -102 160 72 1133 224 104 76 chr2 227301087 227301212 -23386642 + MLT1J LTR MaLR 1 121 -390 2661 188 65 54 chr2 227301212 227301855 -23385999 + MLT1E1 LTR MaLR 5 654 0 1133 224 104 76 chr2 227301855 227302189 -23385665 + MLT1J LTR MaLR 121 473 -38 224 310 95 0 chr2 227303343 227303459 -23384395 - L3b LINE CR1 -168 1415 1289 421 224 122 66 chr2 227303838 227303952 -23383902 + LTR33 LTR ERVL 18 149 -372 1582 157 62 104 chr2 227303952 227304345 -23383509 + MLT2D LTR ERVL 1 376 -38 261 0 0 0 chr2 227304345 227304374 -23383480 + (CA)n Simple_repeat Simple_repeat 1 29 0 1582 157 62 104 chr2 227304374 227304412 -23383442 + MLT2D LTR ERVL 376 414 0 421 224 122 66 chr2 227304412 227304493 -23383361 + LTR33 LTR ERVL 149 224 -297 288 349 35 0 chr2 227304495 227304667 -23383187 + LTR33 LTR ERVL 294 471 -50 2363 109 0 0 chr2 227304992 227305304 -23382550 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 227305645 227305668 -23382186 + AT_rich Low_complexity Low_complexity 1 23 0 14749 125 34 10 chr2 227306113 227308441 -23379413 + Tigger1 DNA MER2_type 1 2384 -34 2608 71 0 0 chr2 227308851 227309161 -23378693 - AluY SINE Alu -1 310 1 2343 178 34 5 chr2 227309550 227309961 -23377893 + MSTB1 LTR MaLR 5 427 -5 2122 148 120 5 chr2 227310767 227311151 -23376703 - MSTA LTR MaLR 0 428 1 724 260 181 30 chr2 227312126 227312582 -23375272 + MLT1G LTR MaLR 12 590 0 2003 156 0 13 chr2 227312642 227312949 -23374905 + AluSx SINE Alu 1 303 -9 426 280 138 38 chr2 227313115 227313376 -23374478 - MLT1J LTR MaLR -224 287 1 252 312 131 30 chr2 227313404 227313603 -23374251 - MLT1K LTR MaLR -93 495 277 568 307 16 40 chr2 227313752 227314003 -23373851 + MIR SINE MIR 16 260 -2 405 235 114 30 chr2 227314643 227314775 -23373079 - MIR SINE MIR -105 157 15 201 289 37 89 chr2 227314845 227314980 -23372874 + MIR SINE MIR 7 134 -128 2005 67 27 109 chr2 227315135 227315465 -23372389 - AluYb8 SINE Alu -15 303 1 271 294 11 33 chr2 227315859 227315951 -23371903 + LTR67 LTR ERVL 2 91 -466 821 272 144 58 chr2 227315978 227316464 -23371390 + MLT1H LTR MaLR 22 549 0 676 266 129 80 chr2 227316464 227316807 -23371047 + LTR67 LTR ERVL 111 470 -87 530 320 44 17 chr2 227316809 227317179 -23370675 - LTR16C LTR ERVL 0 491 80 702 147 31 47 chr2 227317317 227317446 -23370408 + MER63 DNA MER1_type 8 760 -76 541 345 108 0 chr2 227317843 227318121 -23369733 - L3b LINE CR1 -172 1411 1104 1123 144 118 55 chr2 227318723 227318994 -23368860 - MER33 DNA MER1_type -35 289 2 784 208 13 0 chr2 227319014 227319173 -23368681 + MER5A DNA MER1_type 13 173 -16 717 106 0 99 chr2 227319502 227319644 -23368210 + MER53 DNA DNA 1 128 -61 402 158 98 0 chr2 227319650 227319732 -23368122 + MER53 DNA DNA 94 183 -6 307 164 30 0 chr2 227319672 227319739 -23368115 - MER53 DNA DNA -112 77 9 * 252 0 0 0 chr2 227319987 227320015 -23367839 + (A)n Simple_repeat Simple_repeat 1 28 0 453 281 30 18 chr2 227322276 227322443 -23365411 + MIR SINE MIR 36 204 -58 1896 115 17 54 chr2 227323127 227323444 -23364410 + AluSx SINE Alu 1 306 0 421 269 84 13 chr2 227323485 227323777 -23364077 + L1MDb LINE L1 1137 1456 -4940 281 312 81 0 chr2 227323801 227323974 -23363880 + L1MDb LINE L1 1301 1487 -4921 577 87 43 11 chr2 227324025 227324117 -23363737 + L1PB1 LINE L1 6053 6147 -4 378 0 0 0 chr2 227324237 227324279 -23363575 + (TAA)n Simple_repeat Simple_repeat 2 43 0 235 260 20 10 chr2 227324390 227324490 -23363364 + (TA)n Simple_repeat Simple_repeat 1 101 0 1473 123 7 110 chr2 227324753 227325045 -23362809 + AluSx SINE Alu 50 311 -1 693 66 0 0 chr2 227325048 227325139 -23362715 + (GGAA)n Simple_repeat Simple_repeat 4 94 0 1569 166 80 70 chr2 227325289 227325758 -23362096 - MER31A LTR ERV1 -10 651 1 1674 181 0 32 chr2 227325770 227326079 -23361775 - AluJo SINE Alu -10 302 4 296 336 23 8 chr2 227326222 227326353 -23361501 + GA-rich Low_complexity Low_complexity 5 137 0 419 185 208 8 chr2 227327790 227327920 -23359934 - MIR SINE MIR -21 241 86 4010 115 25 31 chr2 227328071 227328201 -23359653 - MER41B LTR ERV1 -2 633 504 1192 59 0 20 chr2 227328201 227328353 -23359501 + L1PA8 LINE L1 6018 6166 -6 4010 115 25 31 chr2 227328353 227328859 -23358995 - MER41B LTR ERV1 -131 504 1 3917 123 55 3 chr2 227329646 227330250 -23357604 - MER41B LTR ERV1 0 635 1 4247 137 29 47 chr2 227330523 227330626 -23357228 + MER4E LTR ERV1 1 104 -675 4191 88 7 7 chr2 227330626 227331180 -23356674 - MER41A LTR ERV1 0 554 1 4247 137 29 47 chr2 227331180 227331859 -23355995 + MER4E LTR ERV1 104 769 -10 24 32 0 0 chr2 227332206 227332237 -23355617 + AT_rich Low_complexity Low_complexity 1 31 0 733 127 8 0 chr2 227332907 227333025 -23354829 + AluY SINE Alu 186 304 -7 2133 136 7 7 chr2 227334360 227334668 -23353186 - AluSx SINE Alu -4 308 1 183 156 0 0 chr2 227335923 227335955 -23351899 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 361 257 92 106 chr2 227336867 227337225 -23350629 + MLT1L LTR MaLR 23 375 -240 428 288 15 8 chr2 227337276 227337408 -23350446 + MLT1L LTR MaLR 466 598 -17 684 294 44 11 chr2 227337495 227337658 -23350196 + MLT1L LTR MaLR 150 327 -288 2491 103 16 21 chr2 227337658 227338035 -23349819 + THE1C LTR MaLR 1 375 0 684 294 44 11 chr2 227338035 227338143 -23349711 + MLT1L LTR MaLR 327 430 -185 307 113 32 0 chr2 227339142 227339204 -23348650 + (TA)n Simple_repeat Simple_repeat 2 65 0 2105 130 41 35 chr2 227339255 227339600 -23348254 - THE1B LTR MaLR -16 348 2 254 333 86 0 chr2 227339681 227339774 -23348080 + MIR SINE MIR 23 123 -85 1337 193 35 15 chr2 227339786 227340198 -23347656 + MLT1C LTR MaLR 15 463 -4 227 257 48 121 chr2 227340724 227340973 -23346881 - L2 LINE L2 0 3313 3083 978 104 0 0 chr2 227340973 227341098 -23346756 + FLAM_C SINE Alu 1 125 -18 583 295 148 33 chr2 227341151 227341594 -23346260 - L2 LINE L2 -234 3038 2543 489 313 105 32 chr2 227341960 227342340 -23345514 + L3 LINE CR1 1136 1543 -34 182 37 37 0 chr2 227343523 227343550 -23344304 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 202 216 0 0 chr2 227343602 227343639 -23344215 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 425 275 88 25 chr2 227344056 227344216 -23343638 + MIR SINE MIR 35 204 -58 2392 96 3 0 chr2 227344534 227344835 -23343019 + AluSp SINE Alu 1 302 -11 2391 96 0 0 chr2 227345145 227345447 -23342407 + AluSx SINE Alu 1 302 -10 380 357 23 0 chr2 227346081 227346252 -23341602 - L3 LINE CR1 -90 1487 1313 227 225 14 0 chr2 227346408 227346479 -23341375 + CT-rich Low_complexity Low_complexity 2 73 0 4971 223 44 12 chr2 227346615 227347821 -23340033 + L1MC4 LINE L1 6493 7736 -306 410 221 12 0 chr2 227347813 227347899 -23339955 + L1MC4 LINE L1 7956 8042 0 * 311 270 30 10 chr2 227348164 227348264 -23339590 + MER103 DNA DNA 25 126 -40 873 241 23 5 chr2 227348370 227348590 -23339264 + MIR SINE MIR 29 252 -10 197 216 39 0 chr2 227349653 227349704 -23338150 + MIR SINE MIR 90 142 -66 682 260 57 16 chr2 227349736 227349982 -23337872 - MIR SINE MIR 0 262 7 29 28 0 0 chr2 227350636 227350672 -23337182 + AT_rich Low_complexity Low_complexity 1 36 0 738 275 169 45 chr2 227350739 227351205 -23336649 - MLT1K LTR MaLR -57 531 8 244 261 58 0 chr2 227351291 227351360 -23336494 + MIR SINE MIR 178 250 -12 421 216 21 0 chr2 227351376 227351473 -23336381 - MIR SINE MIR -98 164 66 2188 141 0 0 chr2 227351810 227352122 -23335732 - AluSx SINE Alu 0 312 1 374 260 73 0 chr2 227352288 227352384 -23335470 - L2 LINE L2 0 3313 3211 182 331 85 56 chr2 227352582 227352960 -23334894 - L2 LINE L2 -554 2760 2372 273 176 20 0 chr2 227353550 227353601 -23334253 + MIR SINE MIR 203 254 -8 189 0 0 0 chr2 227353642 227353663 -23334191 + (A)n Simple_repeat Simple_repeat 1 21 0 3625 171 36 0 chr2 227354028 227354667 -23333187 + L1MB3 LINE L1 5522 6183 0 465 50 0 0 chr2 227355622 227355682 -23332172 + (CCCCCA)n Simple_repeat Simple_repeat 1 60 0 2146 90 3 72 chr2 227356077 227356410 -23331444 - AluSx SINE Alu -2 310 1 218 356 0 11 chr2 227357889 227357976 -23329878 + GA-rich Low_complexity Low_complexity 3 88 0 252 241 0 0 chr2 227358039 227358093 -23329761 + (CA)n Simple_repeat Simple_repeat 1 54 0 383 337 19 4 chr2 227358309 227358520 -23329334 + MLT1K LTR MaLR 12 308 -280 297 229 49 90 chr2 227358609 227358731 -23329123 + MLT1K LTR MaLR 470 586 -2 883 303 28 62 chr2 227360009 227360507 -23327347 - LTR67 LTR ERVL 0 557 77 1130 132 33 6 chr2 227360507 227360688 -23327166 - MLT1B LTR MaLR 0 390 205 2103 170 101 38 chr2 227360688 227361106 -23326748 + MLT2B1 LTR ERVL 1 444 -76 270 0 0 0 chr2 227361109 227361139 -23326715 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 288 0 0 0 chr2 227361138 227361170 -23326684 + (GA)n Simple_repeat Simple_repeat 2 33 0 548 267 110 11 chr2 227361511 227361702 -23326152 - MIR SINE MIR -7 255 46 492 272 22 0 chr2 227361790 227361926 -23325928 - MIR3 SINE MIR -25 183 45 24 0 0 0 chr2 227363048 227363072 -23324782 + AT_rich Low_complexity Low_complexity 1 24 0 707 295 99 58 chr2 227363499 227363619 -23324235 + L1ME4a LINE L1 5319 5433 -688 1914 151 0 10 chr2 227363619 227363911 -23323943 + AluSx SINE Alu 1 289 -23 707 295 99 58 chr2 227363911 227364377 -23323477 + L1ME4a LINE L1 5433 5919 -202 252 263 84 42 chr2 227365147 227365242 -23322612 - MIR3 SINE MIR -49 159 61 243 344 102 0 chr2 227365307 227365435 -23322419 - MIR SINE MIR -52 210 70 2541 226 27 6 chr2 227366228 227366754 -23321100 - MLT1F LTR MaLR 0 542 6 2220 90 0 7 chr2 227366913 227367201 -23320653 + AluSq SINE Alu 1 286 -27 1499 131 0 0 chr2 227367800 227368022 -23319832 + AluSg/x SINE Alu 84 305 -5 505 262 164 0 chr2 227369524 227369741 -23318113 + MIR SINE MIR 9 259 -3 803 163 0 0 chr2 227370257 227370380 -23317474 + FLAM_C SINE Alu 1 123 -20 2369 162 22 39 chr2 227370412 227370875 -23316979 + L1MB4 LINE L1 5685 6139 -41 2351 103 3 0 chr2 227370889 227371199 -23316655 + AluY SINE Alu 1 311 0 5812 176 67 24 chr2 227371199 227371534 -23316320 + L1MA9 LINE L1 4637 4956 -1356 1804 183 0 7 chr2 227371534 227371829 -23316025 - AluJo SINE Alu -19 293 1 5812 176 67 24 chr2 227371829 227372551 -23315303 + L1MA9 LINE L1 4956 5810 -502 363 78 0 0 chr2 227372551 227372602 -23315252 + (CA)n Simple_repeat Simple_repeat 2 52 0 5812 176 67 24 chr2 227372602 227373125 -23314729 + L1MA9 LINE L1 5810 6309 -3 289 125 0 0 chr2 227373127 227373175 -23314679 + L1MB3 LINE L1 6129 6176 -7 3323 94 26 35 chr2 227373373 227373830 -23314024 + MLT2A2 LTR ERVL 1 453 0 747 254 57 12 chr2 227374033 227374408 -23313446 - LTR33 LTR ERVL -2 519 108 313 200 43 0 chr2 227374828 227374898 -23312956 - LTR33 LTR ERVL -443 78 6 943 181 51 0 chr2 227376516 227376693 -23311161 - MER5A DNA MER1_type -2 187 2 8043 32 0 0 chr2 227376883 227378492 -23309362 + L1PA4 LINE L1 4527 6152 -3 26 30 0 0 chr2 227378492 227378525 -23309329 + AT_rich Low_complexity Low_complexity 1 33 0 325 288 46 33 chr2 227378561 227378714 -23309140 + L1MA8 LINE L1 962 1116 -5982 13408 190 55 73 chr2 227379459 227380105 -23307749 + L1MA8 LINE L1 1613 2269 -5086 2194 113 0 7 chr2 227380105 227380405 -23307449 + AluSc SINE Alu 12 309 0 13408 190 55 73 chr2 227380405 227382507 -23305347 + L1MA8 LINE L1 2269 4407 -2948 685 226 0 0 chr2 227382507 227382622 -23305232 - FLAM_A SINE Alu -15 118 4 13408 190 55 73 chr2 227382622 227383148 -23304706 + L1MA8 LINE L1 4407 4941 -2414 1081 129 60 46 chr2 227383148 227383365 -23304489 + L1MA5A LINE L1 6067 6286 -11 2410 80 0 7 chr2 227383367 227383667 -23304187 - AluY SINE Alu -13 298 1 13408 190 55 73 chr2 227383667 227385575 -23302279 + L1MA8 LINE L1 4942 6418 -937 4173 101 33 39 chr2 227385575 227386204 -23301650 + L1MA2 LINE L1 5675 6304 0 13408 190 55 73 chr2 227386204 227387126 -23300728 + L1MA8 LINE L1 6418 7355 0 2110 96 41 14 chr2 227387129 227387422 -23300432 + AluSp SINE Alu 1 301 -12 308 327 88 0 chr2 227387626 227387739 -23300115 - MIR SINE MIR -65 143 21 1333 265 145 5 chr2 227388432 227388825 -23299029 + MER69 DNA AcHobo 11 458 -2068 406 194 54 11 chr2 227388841 227388934 -23298920 + MIR SINE MIR 92 188 -74 210 71 0 0 chr2 227388938 227388966 -23298888 + (TTA)n Simple_repeat Simple_repeat 1 28 0 223 294 0 5 chr2 227388978 227389098 -23298756 - MIR SINE MIR -25 237 59 707 316 31 55 chr2 227389366 227389718 -23298136 + L1ME LINE L1 5441 5786 -335 1762 219 28 15 chr2 227389964 227390353 -23297501 + MSTD LTR MaLR 1 394 -2 891 228 42 10 chr2 227391134 227391327 -23296527 - MER20 DNA MER1_type -5 214 16 261 322 44 0 chr2 227391489 227391579 -23296275 + L2 LINE L2 3160 3253 -19 436 327 101 27 chr2 227392938 227393195 -23294659 + L2 LINE L2 2996 3271 -1 2245 131 0 0 chr2 227393741 227394047 -23293807 - AluSx SINE Alu -6 306 1 1227 249 113 36 chr2 227395479 227396008 -23291846 - MLT1G LTR MaLR -10 580 11 378 346 205 0 chr2 227396226 227396382 -23291472 + MER91A DNA MER1_type 2 189 -7 733 261 59 22 chr2 227397018 227397290 -23290564 + LTR16A1 LTR ERVL 146 427 -30 1934 207 20 3 chr2 227397414 227397771 -23290083 - MLT1A1 LTR MaLR -2 363 1 599 233 27 7 chr2 227398184 227398330 -23289524 + MIR SINE MIR 58 206 -56 502 211 211 84 chr2 227398450 227398687 -23289167 - MLT1J2 LTR MaLR -131 319 53 2282 106 0 0 chr2 227399807 227400100 -23287754 + AluSc SINE Alu 1 293 -16 1541 215 103 101 chr2 227400119 227400655 -23287199 - MLT1F LTR MaLR 0 542 6 575 234 78 28 chr2 227400661 227400802 -23287052 - MIR SINE MIR -103 159 12 215 260 0 0 chr2 227401382 227401432 -23286422 - MIR SINE MIR -34 228 179 594 250 123 34 chr2 227401464 227401668 -23286186 - MIR SINE MIR 0 262 41 2315 110 3 0 chr2 227401778 227402079 -23285775 - AluSx SINE Alu -10 302 1 1506 184 34 14 chr2 227402189 227402483 -23285371 - MER58B DNA MER1_type 0 341 42 264 179 39 13 chr2 227402906 227402984 -23284870 + GA-rich Low_complexity Low_complexity 1 80 0 2323 133 36 28 chr2 227403013 227403374 -23284480 - THE1B LTR MaLR 0 364 1 296 269 221 0 chr2 227403697 227403801 -23284053 + L2 LINE L2 3145 3271 -1 1133 231 100 43 chr2 227404654 227404999 -23282855 + MLT1J1 LTR MaLR 4 379 -67 2623 145 93 2 chr2 227404999 227405265 -23282589 - MLT1C LTR MaLR 0 467 146 261 0 0 0 chr2 227405265 227405294 -23282560 + (TG)n Simple_repeat Simple_repeat 2 30 0 2623 145 93 2 chr2 227405294 227405455 -23282399 - MLT1C LTR MaLR -321 146 1 1133 231 100 43 chr2 227405455 227405528 -23282326 + MLT1J1 LTR MaLR 379 446 0 889 210 0 11 chr2 227405614 227405790 -23282064 + MER69A DNA AcHobo 2 175 -2 216 276 237 7 chr2 227405793 227405945 -23281909 + L2 LINE L2 2578 2764 -550 491 202 72 8 chr2 227405962 227406084 -23281770 - L2 LINE L2 -15 3257 3143 399 265 72 105 chr2 227406096 227406385 -23281469 - MLT1H LTR MaLR -25 384 109 2330 146 31 16 chr2 227406385 227406769 -23281085 - MLT1B LTR MaLR 0 390 1 399 265 72 105 chr2 227406769 227406814 -23281040 - MLT1H LTR MaLR -300 109 64 3709 153 57 19 chr2 227406862 227407601 -23280253 + LTR1B LTR ERV1 1 785 0 300 333 60 0 chr2 227407869 227407986 -23279868 + MIR3 SINE MIR 49 172 -36 277 217 198 38 chr2 227408056 227408162 -23279692 - MER103 DNA DNA -1 165 43 780 277 42 8 chr2 227408504 227408742 -23279112 - MARNA DNA Mariner -99 487 242 243 59 0 0 chr2 227409675 227409709 -23278145 - MIR SINE MIR -65 143 110 2393 98 0 0 chr2 227409822 227410128 -23277726 + AluSc SINE Alu 1 306 -3 385 256 23 53 chr2 227410130 227410263 -23277591 - MER5A DNA MER1_type -44 145 17 327 25 0 0 chr2 227410355 227410395 -23277459 + (CA)n Simple_repeat Simple_repeat 1 40 0 270 106 0 0 chr2 227410395 227410442 -23277412 + (GA)n Simple_repeat Simple_repeat 1 47 0 186 312 51 56 chr2 227410677 227410858 -23276996 - MIR SINE MIR -61 201 21 2151 103 0 0 chr2 227411702 227412003 -23275851 - AluSx SINE Alu 0 301 1 359 83 17 0 chr2 227412158 227412218 -23275636 + (TC)n Simple_repeat Simple_repeat 2 62 0 270 274 94 0 chr2 227412225 227412331 -23275523 + L2 LINE L2 3198 3313 0 401 286 113 39 chr2 227412649 227413037 -23274817 + L1ME4a LINE L1 5605 6021 -100 205 192 0 51 chr2 227413822 227413900 -23273954 + GA-rich Low_complexity Low_complexity 4 77 0 2378 83 0 0 chr2 227414898 227415187 -23272667 - AluSg SINE Alu -21 289 1 1600 123 0 0 chr2 227415761 227415980 -23271874 - AluSx SINE Alu -93 219 1 354 316 125 7 chr2 227415997 227416133 -23271721 - L2 LINE L2 0 3272 3121 609 286 59 99 chr2 227416174 227416376 -23271478 - L2 LINE L2 -367 2947 2739 2296 76 0 13 chr2 227416376 227416680 -23271174 + AluY SINE Alu 1 300 -11 609 286 59 99 chr2 227416680 227417085 -23270769 - L2 LINE L2 -575 2739 2364 196 355 0 0 chr2 227417242 227417304 -23270550 - MIR3 SINE MIR -18 190 129 2294 95 0 0 chr2 227417480 227417785 -23270069 - AluSx SINE Alu -7 305 1 280 344 39 16 chr2 227420119 227420247 -23267607 - MIR SINE MIR -61 147 17 600 228 0 16 chr2 227420601 227420728 -23267126 + FLAM_C SINE Alu 1 125 -18 570 271 51 49 chr2 227420946 227421113 -23266741 + L1MC5 LINE L1 5431 5596 -2446 426 135 81 0 chr2 227421113 227421187 -23266667 + MER116 DNA Mariner 1 80 0 570 271 51 49 chr2 227421187 227421315 -23266539 + L1MC5 LINE L1 5596 5722 -2320 1636 170 6 22 chr2 227421315 227421626 -23266228 + AluJo SINE Alu 1 306 -6 570 271 51 49 chr2 227421626 227421847 -23266007 + L1MC5 LINE L1 5722 7687 -355 294 143 57 0 chr2 227421862 227421932 -23265922 + L1MC5 LINE L1 7638 7711 -250 214 345 0 0 chr2 227421932 227421990 -23265864 + polypurine Low_complexity Low_complexity 4 61 0 688 238 98 10 chr2 227423030 227423223 -23264631 + MIR SINE MIR 40 249 -13 372 293 0 68 chr2 227423437 227423524 -23264330 + MIR SINE MIR 15 90 -172 2222 201 41 18 chr2 227423524 227424016 -23263838 - MLT1D LTR MaLR 0 505 3 372 293 0 68 chr2 227424016 227424075 -23263779 + MIR SINE MIR 90 151 -111 1027 207 10 5 chr2 227424082 227424285 -23263569 + MLT2D LTR ERVL 3 206 -208 881 151 4 178 chr2 227424443 227424683 -23263171 + MLT2D LTR ERVL 209 389 -8 247 54 108 0 chr2 227424650 227424687 -23263167 + MLT2B1 LTR ERVL 480 520 0 * 283 303 40 0 chr2 227424687 227424786 -23263068 + MIR SINE MIR 158 260 -2 21 36 0 0 chr2 227424795 227424823 -23263031 + AT_rich Low_complexity Low_complexity 1 28 0 254 351 13 0 chr2 227426261 227426338 -23261516 + MIR3 SINE MIR 85 162 -46 3111 106 2 7 chr2 227426341 227426777 -23261077 + MER57B LTR ERV1 1 434 0 1034 287 55 28 chr2 227426894 227427523 -23260331 - L2 LINE L2 0 3313 2672 1336 168 13 17 chr2 227427606 227427838 -23260016 + MLT1B LTR MaLR 2 232 -158 * 1569 166 53 86 chr2 227427836 227428210 -23259644 - MLT1A2 LTR MaLR -11 363 2 1057 142 6 0 chr2 227428210 227428367 -23259487 + MLT1B LTR MaLR 233 390 0 2092 116 0 0 chr2 227428504 227428797 -23259057 + AluSx SINE Alu 1 293 -19 180 0 0 0 chr2 227428797 227428817 -23259037 + (GA)n Simple_repeat Simple_repeat 2 21 0 492 317 21 0 chr2 227429754 227429899 -23257955 + MIR SINE MIR 87 234 -28 1764 153 10 0 chr2 227429909 227430203 -23257651 - AluJb SINE Alu -11 301 5 2500 185 14 46 chr2 227430317 227430878 -23256976 + LTR55 LTR ERV 1 543 -5 244 266 7 7 chr2 227431310 227431453 -23256401 + (ATG)n Simple_repeat Simple_repeat 2 144 0 620 291 94 27 chr2 227431459 227431682 -23256172 - MIR SINE MIR -6 256 19 329 270 178 33 chr2 227432916 227433068 -23254786 - MIR3 SINE MIR -15 193 20 2604 107 19 0 chr2 227433398 227433764 -23254090 + THE1C LTR MaLR 1 373 -2 2411 176 72 51 chr2 227433787 227434400 -23253454 - MLT1E2 LTR MaLR 0 626 1 470 233 0 0 chr2 227434797 227434900 -23252954 + MER103 DNA DNA 21 123 -43 462 262 115 48 chr2 227435538 227435790 -23252064 + L1ME4a LINE L1 5794 6062 -59 2565 106 8 16 chr2 227436051 227436429 -23251425 - THE1C LTR MaLR 0 375 1 1664 195 68 21 chr2 227436450 227436788 -23251066 - MLT1A1 LTR MaLR 0 365 12 2651 103 8 16 chr2 227437582 227437960 -23249894 - THE1C LTR MaLR 0 375 1 1965 176 131 7 chr2 227438225 227438668 -23249186 + MLT1D LTR MaLR 5 502 -3 409 232 65 12 chr2 227438724 227438892 -23248962 + MER69 DNA AcHobo 2345 2521 -5 458 118 7 0 chr2 227438897 227438965 -23248889 - L1MC/D LINE L1 -499 5743 5673 697 308 79 0 chr2 227439160 227439374 -23248480 - MIR SINE MIR -31 231 1 2484 143 10 0 chr2 227439545 227439950 -23247904 + L1MA3 LINE L1 5888 6296 -9 9365 63 9 92 chr2 227439979 227441503 -23246351 + SVA Other Other 19 1420 0 619 278 106 39 chr2 227441600 227441931 -23245923 + L1ME4a LINE L1 5739 6091 -30 397 286 81 47 chr2 227442001 227442235 -23245619 - MIR SINE MIR 0 262 21 1056 183 32 32 chr2 227442384 227442603 -23245251 - MER20 DNA MER1_type 0 219 1 843 133 0 22 chr2 227443603 227443738 -23244116 + AluJo SINE Alu 9 140 -172 1984 129 27 0 chr2 227443739 227444034 -23243820 + AluSx SINE Alu 1 303 -9 510 155 0 0 chr2 227444034 227444131 -23243723 + GA-rich Low_complexity Low_complexity 2 98 0 1592 183 84 12 chr2 227444169 227444491 -23243363 - MER2 DNA MER2_type 0 345 1 409 277 18 9 chr2 227444549 227444661 -23243193 + L3 LINE CR1 922 1034 -543 318 274 29 39 chr2 227444869 227444971 -23242883 + L2 LINE L2 3205 3305 -8 4371 253 114 19 chr2 227445171 227446715 -23241139 + L2 LINE L2 1076 2766 -548 261 278 60 102 chr2 227448800 227449006 -23238848 - MIR SINE MIR -50 212 18 2156 116 7 0 chr2 227449338 227449641 -23238213 + AluSg SINE Alu 1 305 -5 285 275 115 44 chr2 227450142 227450324 -23237530 - MER117 DNA MER1_type -2 195 1 606 232 79 28 chr2 227451187 227451364 -23236490 + MIR3 SINE MIR 10 195 -13 301 280 11 11 chr2 227451630 227451723 -23236131 + MIR3 SINE MIR 116 208 0 395 369 53 0 chr2 227452693 227452880 -23234974 + L3b LINE CR1 1273 1469 -114 348 203 70 133 chr2 227452890 227453033 -23234821 + MLT1B LTR MaLR 1 134 -256 1006 123 31 19 chr2 227453171 227453333 -23234521 - AluSg/x SINE Alu -15 295 132 1918 138 7 3 chr2 227453458 227453755 -23234099 - AluSx SINE Alu -14 298 1 517 145 0 0 chr2 227454202 227454278 -23233576 + MER63 DNA MER1_type 675 750 -310 329 211 56 0 chr2 227454278 227454349 -23233505 + MER63 DNA MER1_type 978 1052 -9 374 300 61 28 chr2 227457355 227457535 -23230319 - L2 LINE L2 -1 3312 3127 410 308 154 0 chr2 227457782 227457938 -23229916 - MER5A DNA MER1_type -1 188 9 708 214 65 18 chr2 227458348 227458516 -23229338 - MER5B DNA MER1_type -2 176 1 218 245 32 21 chr2 227458886 227458980 -23228874 + A-rich Low_complexity Low_complexity 2 96 0 499 281 66 64 chr2 227459015 227459559 -23228295 + HAL1 LINE L1 1112 1656 -851 26 0 0 0 chr2 227459836 227459862 -23227992 + AT_rich Low_complexity Low_complexity 1 26 0 483 325 12 4 chr2 227459949 227460198 -23227656 + L1M4 LINE L1 2140 2390 -3756 2163 233 83 10 chr2 227460266 227460782 -23227072 + MLT1E LTR MaLR 1 554 -39 940 128 0 0 chr2 227460795 227460928 -23226926 + AluSq/x SINE Alu 1 133 -179 303 218 47 24 chr2 227461002 227461172 -23226682 + L1ME1 LINE L1 5716 5947 -219 2392 212 13 64 chr2 227461233 227461314 -23226540 + L1ME1 LINE L1 5585 5669 -497 2370 79 0 3 chr2 227461314 227461619 -23226235 + AluY SINE Alu 1 304 -7 2392 212 13 64 chr2 227461619 227462146 -23225708 + L1ME1 LINE L1 5669 6162 -4 334 336 0 25 chr2 227463030 227463152 -23224702 + MIR SINE MIR 20 138 -70 312 261 43 17 chr2 227463420 227463535 -23224319 + MER103 DNA DNA 3 120 -46 293 313 174 0 chr2 227463674 227463818 -23224036 - MER5B DNA MER1_type -8 170 2 265 241 0 0 chr2 227464440 227464494 -23223360 - L1ME LINE L1 -438 5683 5630 4237 145 3 0 chr2 227465243 227465876 -23221978 + MER41B LTR ERV1 1 635 0 205 254 56 24 chr2 227466166 227466292 -23221562 - L2 LINE L2 -86 3227 3098 2356 73 3 7 chr2 227468010 227468311 -23219543 - AluY SINE Alu -11 300 1 454 254 9 0 chr2 227468662 227468776 -23219078 - MER117 DNA MER1_type -36 161 47 238 159 36 159 chr2 227469872 227469949 -23217905 - L1MC4 LINE L1 0 8042 7988 2292 99 6 19 chr2 227469949 227470262 -23217592 + AluSx SINE Alu 1 309 -3 238 159 36 159 chr2 227470262 227470322 -23217532 - L1MC4 LINE L1 -54 7988 7922 249 108 0 0 chr2 227470325 227470362 -23217492 + (TC)n Simple_repeat Simple_repeat 2 38 0 4518 124 25 43 chr2 227470370 227471129 -23216725 + Tigger2 DNA MER2_type 2 746 -1972 1336 180 11 38 chr2 227471193 227471221 -23216633 + Tigger2 DNA MER2_type 2461 2488 -230 2641 48 0 3 chr2 227471221 227471531 -23216323 - AluY SINE Alu -2 309 1 1336 180 11 38 chr2 227471531 227471763 -23216091 + Tigger2 DNA MER2_type 2488 2714 -4 2281 83 0 10 chr2 227471774 227472064 -23215790 + AluSc SINE Alu 1 287 -22 6293 217 72 81 chr2 227472094 227473426 -23214428 - L1MC4a LINE L1 -95 7713 6370 2731 152 9 13 chr2 227473426 227473873 -23213981 - MER65A LTR ERV1 0 445 1 6293 217 72 81 chr2 227473873 227473905 -23213949 - L1MC4a LINE L1 -1438 6370 6339 2159 117 7 3 chr2 227473905 227474214 -23213640 + AluSx SINE Alu 1 310 -2 6293 217 72 81 chr2 227474214 227474771 -23213083 - L1MC4a LINE L1 -1469 6339 5812 1541 204 0 14 chr2 227474771 227475085 -23212769 - AluJb SINE Alu 0 320 11 6293 217 72 81 chr2 227475085 227475443 -23212411 - L1MC4a LINE L1 -1996 5812 5452 217 354 15 0 chr2 227475884 227475949 -23211905 + L2 LINE L2 3121 3186 -86 2071 152 31 28 chr2 227477416 227477547 -23210307 - MLT1A1 LTR MaLR 0 365 236 2414 152 31 12 chr2 227477547 227477967 -23209887 - MSTA LTR MaLR 0 428 1 2071 152 31 28 chr2 227477967 227478190 -23209664 - MLT1A1 LTR MaLR -129 236 10 859 206 50 23 chr2 227478197 227478416 -23209438 + MIR SINE MIR 12 236 -26 1334 209 133 30 chr2 227478573 227478980 -23208874 + MLT1J LTR MaLR 1 449 -62 3175 184 36 36 chr2 227479539 227479731 -23208123 - L1MD2 LINE L1 0 6359 6168 2058 88 67 11 chr2 227479731 227480016 -23207838 - AluSg SINE Alu -9 301 1 3175 184 36 36 chr2 227480016 227480508 -23207346 - L1MD2 LINE L1 -190 6169 5675 184 327 56 56 chr2 227481041 227481148 -23206706 + L2 LINE L2 3141 3247 -25 231 83 0 0 chr2 227481603 227481620 -23206234 + (TAA)n Simple_repeat Simple_repeat 1 17 -19 2405 62 0 10 chr2 227481620 227481911 -23205943 + AluY SINE Alu 1 288 -23 231 83 0 0 chr2 227481911 227481929 -23205925 + (TAA)n Simple_repeat Simple_repeat 16 36 0 219 282 75 98 chr2 227482800 227482895 -23204959 + MIR SINE MIR 92 183 -79 1685 176 17 23 chr2 227482895 227483197 -23204657 + AluJo SINE Alu 1 300 -12 219 282 75 98 chr2 227483197 227483275 -23204579 + MIR SINE MIR 183 261 -1 190 302 147 17 chr2 227484713 227484829 -23203025 - L3b LINE CR1 -95 1488 1358 1835 140 58 3 chr2 227485434 227485727 -23202127 + AluJb SINE Alu 2 310 -2 201 344 0 0 chr2 227486727 227486791 -23201063 + MER5A DNA MER1_type 85 148 -41 248 295 13 70 chr2 227487502 227487658 -23200196 - L2 LINE L2 -557 2757 2611 209 81 0 27 chr2 227488285 227488322 -23199532 + (TTAGGG)n Simple_repeat Simple_repeat 6 41 0 597 266 78 44 chr2 227488531 227488850 -23199004 + LTR16B LTR ERVL 135 464 0 2696 113 11 28 chr2 227490581 227491014 -23196840 + L1PA16 LINE L1 5724 6149 -17 2216 65 61 4 chr2 227491014 227491291 -23196563 - AluY SINE Alu -18 293 1 191 286 122 41 chr2 227491633 227491731 -23196123 - MIR SINE MIR -87 121 16 23 0 0 0 chr2 227491767 227491790 -23196064 + AT_rich Low_complexity Low_complexity 1 23 0 4671 187 18 9 chr2 227494217 227495126 -23192728 + MER63C DNA MER1_type 12 928 -2 294 264 208 7 chr2 227495993 227496137 -23191717 + MIR SINE MIR 17 189 -73 683 249 193 56 chr2 227496253 227496702 -23191152 + MLT1H LTR MaLR 1 549 0 408 322 110 25 chr2 227497888 227498376 -23189478 + L2 LINE L2 2494 3054 -218 2333 88 15 103 chr2 227498376 227498722 -23189132 + THE1B LTR MaLR 1 309 -55 2372 79 3 0 chr2 227498722 227499014 -23188840 + AluSp SINE Alu 14 306 -7 2333 88 15 103 chr2 227499014 227499066 -23188788 + THE1B LTR MaLR 309 364 0 408 322 110 25 chr2 227499066 227499228 -23188626 + L2 LINE L2 3054 3201 -71 255 284 29 10 chr2 227499454 227499556 -23188298 - L1MD3 LINE L1 -12 7983 7880 1101 208 158 4 chr2 227500769 227501034 -23186820 + MER58B DNA MER1_type 4 309 -32 2011 111 25 0 chr2 227501039 227501318 -23186536 + AluSx SINE Alu 5 290 -22 235 152 0 22 chr2 227501337 227501383 -23186471 + MER58B DNA MER1_type 295 339 -2 542 186 39 70 chr2 227503211 227503337 -23184517 - MIR SINE MIR -92 170 48 2167 136 24 24 chr2 227503337 227503712 -23184142 - THE1C LTR MaLR 0 375 1 542 186 39 70 chr2 227503712 227503741 -23184113 - MIR SINE MIR -214 48 20 4014 124 9 50 chr2 227503835 227503961 -23183893 + MER41B LTR ERV1 3 133 -502 2522 63 0 10 chr2 227503961 227504263 -23183591 + AluY SINE Alu 2 300 -11 4014 124 9 50 chr2 227504263 227504796 -23183058 + MER41B LTR ERV1 133 635 0 2093 81 92 0 chr2 227504990 227505261 -23182593 + AluSg SINE Alu 1 296 -14 401 90 15 0 chr2 227505795 227505862 -23181992 + (GA)n Simple_repeat Simple_repeat 1 68 0 2313 95 0 43 chr2 227505931 227506257 -23181597 + AluSx SINE Alu 1 312 0 1656 194 48 9 chr2 227506488 227506818 -23181036 - MER61A LTR ERV1 0 343 1 2201 122 19 53 chr2 227508154 227508531 -23179323 - THE1B LTR MaLR 0 364 1 291 363 112 16 chr2 227509018 227509269 -23178585 + MLT1K LTR MaLR 289 563 -25 196 233 0 50 chr2 227509363 227509423 -23178431 + L2 LINE L2 3003 3059 -213 2295 185 12 124 chr2 227509656 227510299 -23177555 + MER70B LTR ERVL 7 577 -1 412 245 87 57 chr2 227510303 227510511 -23177343 - MLT1L LTR MaLR -202 391 108 378 0 0 0 chr2 227511601 227511643 -23176211 + (TAA)n Simple_repeat Simple_repeat 2 43 0 692 245 80 5 chr2 227511652 227511840 -23176014 - MIR SINE MIR -12 250 49 2299 146 22 0 chr2 227512020 227512377 -23175477 + MLT1A1 LTR MaLR 1 365 0 239 263 0 0 chr2 227512616 227512673 -23175181 - L2 LINE L2 -1 3271 3215 550 271 48 52 chr2 227513259 227513488 -23174366 - MIR SINE MIR -7 255 28 385 156 11 111 chr2 227513516 227513606 -23174248 + Charlie4a DNA MER1_type 1 81 -427 353 159 41 166 chr2 227513665 227513685 -23174169 - MER97a DNA MER1_type? -722 172 151 1834 101 104 14 chr2 227513685 227513972 -23173882 - AluSp SINE Alu 0 313 1 353 159 41 166 chr2 227513972 227514022 -23173832 - MER97a DNA MER1_type? -743 151 126 2013 163 3 0 chr2 227514022 227514322 -23173532 + AluJb SINE Alu 1 301 -11 353 159 41 166 chr2 227514322 227514395 -23173459 - MER97a DNA MER1_type? -768 126 46 * 1364 183 27 39 chr2 227514393 227514726 -23173128 + Charlie4a DNA MER1_type 84 412 -96 2243 96 0 7 chr2 227514739 227515032 -23172822 + AluSg1 SINE Alu 1 291 -18 834 235 285 68 chr2 227515725 227516181 -23171673 - MLT1G LTR MaLR 0 555 1 277 399 0 0 chr2 227516931 227517074 -23170780 - L2 LINE L2 -329 2984 2842 261 261 119 45 chr2 227517154 227517288 -23170566 + MLT1K LTR MaLR 158 301 -287 571 230 110 21 chr2 227517311 227517502 -23170352 + MIR SINE MIR 9 216 -46 458 323 49 72 chr2 227518180 227518432 -23169422 + L1 LINE L1 4161 4406 -1740 2218 98 3 40 chr2 227518432 227518757 -23169097 + AluSq SINE Alu 1 313 0 458 323 49 72 chr2 227518757 227518811 -23169043 + L1 LINE L1 4406 4460 -1686 1748 165 34 17 chr2 227518820 227519111 -23168743 - AluJb SINE Alu -15 297 2 1865 131 52 30 chr2 227519672 227520039 -23167815 - THE1C LTR MaLR 0 375 1 332 138 0 0 chr2 227520149 227520207 -23167647 - L1PB3 LINE L1 -3 6151 6094 188 322 0 17 chr2 227520612 227520671 -23167183 + MIR3 SINE MIR 117 174 -34 612 220 76 11 chr2 227520690 227520954 -23166900 + MLT1A1 LTR MaLR 3 363 -2 2385 88 0 0 chr2 227523669 227523966 -23163888 + AluY SINE Alu 2 298 -13 954 193 156 42 chr2 227524010 227524368 -23163486 + MER113 DNA MER1_type? 4 402 -119 640 243 14 0 chr2 227524416 227524564 -23163290 - MIR SINE MIR -81 181 32 2095 107 3 20 chr2 227524575 227524874 -23162980 + AluSx SINE Alu 1 294 -18 1759 147 33 50 chr2 227525191 227525490 -23162364 - AluJb SINE Alu -18 294 1 2428 84 3 0 chr2 227526109 227526407 -23161447 + AluSg SINE Alu 1 299 -11 2162 121 34 0 chr2 227527151 227527448 -23160406 - AluSx SINE Alu -5 307 1 328 205 60 0 chr2 227527589 227527672 -23160182 + MER69 DNA AcHobo 60 147 -2379 * 367 206 55 0 chr2 227527669 227527742 -23160112 + MER69 DNA AcHobo 2450 2526 0 2629 82 3 0 chr2 227527802 227528156 -23159698 + THE1A LTR MaLR 1 355 0 774 249 46 5 chr2 227528374 227528571 -23159283 + MIR SINE MIR 37 241 -21 2177 114 18 15 chr2 227528635 227528969 -23158885 + MER1B DNA MER1_type 1 335 -2 186 273 0 0 chr2 227529486 227529530 -23158324 - L2 LINE L2 0 3313 3270 460 224 243 0 chr2 227529549 227529701 -23158153 - MER5A DNA MER1_type 0 189 1 233 234 154 55 chr2 227529856 227529914 -23157940 + L2 LINE L2 3030 3081 -232 243 0 0 0 chr2 227529914 227529941 -23157913 + (CA)n Simple_repeat Simple_repeat 1 27 0 233 234 154 55 chr2 227529941 227530083 -23157771 + L2 LINE L2 3081 3250 -63 668 238 72 89 chr2 227530105 227530466 -23157388 + LTR4 LTR ERV1 3 357 -239 573 258 153 24 chr2 227530553 227530801 -23157053 + LTR4 LTR ERV1 317 596 0 268 185 37 0 chr2 227530801 227530855 -23156999 + L2 LINE L2 3207 3262 -10 866 269 8 76 chr2 227530877 227531245 -23156609 - L2 LINE L2 -16 3297 2955 659 187 49 0 chr2 227531261 227531384 -23156470 + MER3 DNA MER1_type 1 129 -80 546 57 0 0 chr2 227531385 227531455 -23156399 + (TTTC)n Simple_repeat Simple_repeat 2 71 0 491 165 13 0 chr2 227531463 227531542 -23156312 - AluJo SINE Alu -57 255 176 488 162 0 0 chr2 227531581 227531655 -23156199 - AluJo SINE Alu -138 174 101 1693 98 70 60 chr2 227531655 227531970 -23155884 + THE1C LTR MaLR 2 319 -56 243 164 36 36 chr2 227531971 227532026 -23155828 - AluSg/x SINE Alu -133 169 115 1240 268 38 8 chr2 227532084 227532476 -23155378 - L2 LINE L2 -413 2901 2498 186 194 0 0 chr2 227532484 227532520 -23155334 - L2 LINE L2 -15 3298 3263 282 294 114 59 chr2 227533574 227533863 -23153991 - MLT1K LTR MaLR 0 588 284 1611 175 20 29 chr2 227534471 227534813 -23153041 + MER63B DNA MER1_type 8 346 -90 10247 221 28 52 chr2 227534831 227535659 -23152195 - L1MD3 LINE L1 -130 6506 5660 2452 107 0 0 chr2 227535659 227535969 -23151885 - AluSg SINE Alu 0 310 1 10247 221 28 52 chr2 227535969 227536803 -23151051 - L1MD3 LINE L1 -976 5660 4808 2114 178 54 2 chr2 227536803 227537208 -23150646 + MSTB LTR MaLR 1 426 0 10247 221 28 52 chr2 227537208 227538252 -23149602 - L1MD3 LINE L1 -1828 4808 3741 831 198 0 52 chr2 227538252 227538424 -23149430 - FRAM SINE Alu -3 163 1 10247 221 28 52 chr2 227538424 227538586 -23149268 - L1MD3 LINE L1 -2895 3741 3577 244 51 0 0 chr2 227538586 227538625 -23149229 - AluSx SINE Alu 0 302 264 1843 97 0 0 chr2 227538625 227538853 -23149001 - AluSx SINE Alu -84 228 1 10247 221 28 52 chr2 227538853 227539748 -23148106 - L1MD3 LINE L1 -3057 3579 2774 2189 234 38 22 chr2 227539742 227539811 -23148043 - L1MD3 LINE L1 -5898 642 576 * 3169 114 47 4 chr2 227539811 227540301 -23147553 - MER9 LTR ERVK 0 511 1 2189 234 38 22 chr2 227540301 227540765 -23147089 - L1MD3 LINE L1 -5964 576 101 456 182 111 0 chr2 227540797 227540896 -23146958 + MER63B DNA MER1_type 325 434 -1 293 273 58 72 chr2 227540942 227541081 -23146773 + LTR67 LTR ERVL 101 237 -320 379 283 83 0 chr2 227541201 227541321 -23146533 + LTR67 LTR ERVL 428 557 0 313 295 62 18 chr2 227543192 227543304 -23144550 - MIR3 SINE MIR -90 118 2 1205 141 70 5 chr2 227543400 227543613 -23144241 - L1PA8 LINE L1 0 6172 5946 206 191 85 0 chr2 227543814 227543861 -23143993 + MER5B DNA MER1_type 1 51 -127 869 137 38 0 chr2 227543904 227544035 -23143819 + AluJo SINE Alu 1 136 -176 306 354 0 0 chr2 227544059 227544141 -23143713 + MER5B DNA MER1_type 93 174 -4 2327 102 85 71 chr2 227544214 227544261 -23143593 - MSTA LTR MaLR 0 428 383 2437 112 0 0 chr2 227544261 227544573 -23143281 + AluSx SINE Alu 1 312 0 2327 102 85 71 chr2 227544573 227544947 -23142907 - MSTA LTR MaLR -45 383 1 287 190 17 0 chr2 227545135 227545193 -23142661 + MER113 DNA MER1_type? 463 521 0 842 76 8 0 chr2 227545315 227545434 -23142420 + L1PB1 LINE L1 6030 6149 -2 21 36 0 0 chr2 227545434 227545462 -23142392 + AT_rich Low_complexity Low_complexity 1 28 0 232 245 157 10 chr2 227545816 227545918 -23141936 - L2 LINE L2 -35 3237 3121 2292 161 45 14 chr2 227548669 227549111 -23138743 + LTR32 LTR ERVL 13 468 -3 200 305 17 0 chr2 227550724 227550783 -23137071 - MER91A DNA MER1_type -136 60 1 468 254 26 106 chr2 227550803 227550992 -23136862 - MIR SINE MIR -41 221 48 2482 42 3 3 chr2 227551784 227552071 -23135783 + AluY SINE Alu 13 299 -12 234 82 106 0 chr2 227554559 227554644 -23133210 + (CA)n Simple_repeat Simple_repeat 1 94 0 624 89 55 7 chr2 227554661 227554807 -23133047 + (CA)n Simple_repeat Simple_repeat 1 153 0 371 253 84 84 chr2 227557652 227557806 -23130048 + MER91B DNA MER1_type 2 155 -35 360 234 180 9 chr2 227558824 227558935 -23128919 + L3 LINE CR1 1362 1491 -86 239 293 0 0 chr2 227560181 227560239 -23127615 - MIR SINE MIR -65 143 86 249 281 238 19 chr2 227561369 227561529 -23126325 + L3 LINE CR1 1270 1464 -113 215 299 8 60 chr2 227562014 227562131 -23125723 + CT-rich Low_complexity Low_complexity 4 114 0 201 121 0 0 chr2 227562640 227562673 -23125181 + (TCC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr2 227563931 227563952 -23123902 + GC_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr2 227564440 227564473 -23123381 + (CCG)n Simple_repeat Simple_repeat 1 33 0 33 25 0 0 chr2 227564507 227564547 -23123307 + GC_rich Low_complexity Low_complexity 1 40 0 269 322 54 7 chr2 227564799 227564948 -23122906 + MIR3 SINE MIR 45 200 -8 1598 180 136 71 chr2 227565600 227565758 -23122096 + MLT1C LTR MaLR 1 147 -320 2311 84 28 0 chr2 227565758 227566044 -23121810 + AluSx SINE Alu 1 294 -18 1598 180 136 71 chr2 227566044 227566319 -23121535 + MLT1C LTR MaLR 147 462 -5 460 285 140 17 chr2 227567462 227567641 -23120213 + LTR67 LTR ERVL 5 205 -352 466 289 35 17 chr2 227568074 227568247 -23119607 - MIR SINE MIR -53 209 34 2307 116 10 0 chr2 227568302 227568605 -23119249 - AluSx SINE Alu -6 306 1 859 256 104 0 chr2 227568732 227568962 -23118892 + MIR SINE MIR 4 257 -5 221 230 27 40 chr2 227569430 227569504 -23118350 + MIR SINE MIR 190 262 0 248 281 193 64 chr2 227570146 227570441 -23117413 - L2 LINE L2 -60 3253 2921 2239 116 3 0 chr2 227570548 227570842 -23117012 + AluSx SINE Alu 1 295 -17 282 281 187 32 chr2 227570887 227571077 -23116777 + MIR SINE MIR 3 219 -43 304 299 47 47 chr2 227571159 227571286 -23116568 + L2 LINE L2 3138 3264 -8 2321 98 17 0 chr2 227571486 227571783 -23116071 - AluSx SINE Alu -10 302 1 2391 97 0 7 chr2 227571850 227572158 -23115696 - AluSx SINE Alu -6 306 1 32 26 0 0 chr2 227572705 227572744 -23115110 + AT_rich Low_complexity Low_complexity 1 39 0 2313 86 14 0 chr2 227573835 227574126 -23113728 - AluY SINE Alu -16 295 1 26 30 0 0 chr2 227574321 227574354 -23113500 + AT_rich Low_complexity Low_complexity 1 33 0 582 261 117 69 chr2 227574713 227575089 -23112765 - MLT1K LTR MaLR -4 584 191 380 285 110 2 chr2 227576187 227576350 -23111504 + MIR SINE MIR 17 190 -68 542 290 18 12 chr2 227578362 227578585 -23109269 + C-rich Low_complexity Low_complexity 1 224 0 412 338 0 0 chr2 227578598 227578794 -23109060 + C-rich Low_complexity Low_complexity 1 196 0 373 330 138 25 chr2 227579070 227579605 -23108249 + L2 LINE L2 2622 3222 -50 224 325 103 26 chr2 227579672 227579866 -23107988 - MIR SINE MIR -33 229 21 525 272 37 0 chr2 227580784 227580920 -23106934 + MIR SINE MIR 28 168 -94 267 284 86 26 chr2 227581177 227581293 -23106561 - MIR SINE MIR -32 230 108 2529 63 10 0 chr2 227581302 227581602 -23106252 + AluY SINE Alu 1 303 -8 433 165 10 10 chr2 227583587 227583690 -23104164 + CT-rich Low_complexity Low_complexity 3 105 0 1998 147 3 25 chr2 227584307 227584626 -23103228 - AluJo SINE Alu 0 312 1 543 156 0 0 chr2 227586412 227586494 -23101360 + MER67A LTR ERV1 2 83 -460 1265 198 63 31 chr2 227586494 227586871 -23100983 + MER67A LTR ERV1 3 417 -126 2390 108 0 0 chr2 227586871 227587178 -23100676 + AluSq SINE Alu 1 307 -6 1395 232 25 43 chr2 227587211 227587608 -23100246 + MER67A-int LTR ERV1 4521 4910 -26 444 200 0 0 chr2 227587608 227587688 -23100166 + MER67A LTR ERV1 7 86 -457 1930 166 62 55 chr2 227587744 227588181 -23099673 + MER67A LTR ERV1 31 503 -40 2380 102 0 3 chr2 227588181 227588484 -23099370 + AluSg SINE Alu 1 302 -8 1930 166 62 55 chr2 227588484 227588526 -23099328 + MER67A LTR ERV1 503 543 0 303 258 124 82 chr2 227588586 227588659 -23099195 - MIR SINE MIR -32 230 161 2512 95 0 0 chr2 227588659 227588964 -23098890 + AluSx SINE Alu 1 305 -7 303 258 124 82 chr2 227588964 227589084 -23098770 - MIR SINE MIR -101 161 29 644 273 65 9 chr2 227591478 227591603 -23096251 - L1MD3 LINE L1 -25 7970 7853 1514 107 33 139 chr2 227591603 227591940 -23095914 + AluSx SINE Alu 2 302 0 644 273 65 9 chr2 227591940 227591965 -23095889 - L1MD3 LINE L1 -142 7853 7831 2350 90 0 13 chr2 227591965 227592264 -23095590 + AluSg SINE Alu 1 295 -15 644 273 65 9 chr2 227592264 227592401 -23095453 - L1MD3 LINE L1 -164 7831 6020 2341 120 0 0 chr2 227592612 227592921 -23094933 + AluSx SINE Alu 1 309 -3 283 311 161 6 chr2 227592977 227593138 -23094716 - MIR SINE MIR -4 258 73 283 298 200 14 chr2 227593270 227593485 -23094369 - MIR SINE MIR 0 262 8 270 286 84 19 chr2 227594649 227594808 -23093046 - MIR SINE MIR -62 200 30 3120 146 107 30 chr2 227595183 227595450 -23092404 + MER39 LTR ERV1 1 246 -461 2272 83 7 0 chr2 227595450 227595740 -23092114 + AluSp SINE Alu 1 292 -21 3120 146 107 30 chr2 227595740 227596129 -23091725 + MER39 LTR ERV1 246 707 0 180 0 0 0 chr2 227596639 227596659 -23091195 + (T)n Simple_repeat Simple_repeat 1 20 0 2357 108 0 0 chr2 227596908 227597213 -23090641 + AluSq SINE Alu 1 305 -8 2527 58 0 0 chr2 227597236 227597530 -23090324 + AluY SINE Alu 1 294 -17 2174 132 30 0 chr2 227597981 227598284 -23089570 + AluSx SINE Alu 1 312 0 968 164 0 0 chr2 227598605 227598745 -23089109 + FRAM SINE Alu 1 137 -39 300 53 0 0 chr2 227599474 227599512 -23088342 + (A)n Simple_repeat Simple_repeat 1 38 0 2466 89 0 0 chr2 227599770 227600073 -23087781 + AluSc SINE Alu 1 303 -6 364 228 28 90 chr2 227600236 227600307 -23087547 - L2 LINE L2 -1 3271 3212 2218 108 3 7 chr2 227600307 227600603 -23087251 + AluSq SINE Alu 1 295 -18 364 228 28 90 chr2 227600603 227600676 -23087178 - L2 LINE L2 -60 3212 3136 956 143 34 29 chr2 227600695 227600870 -23086984 - MLT1D LTR MaLR 0 505 330 1010 145 0 0 chr2 227600871 227601016 -23086838 - AluJ SINE Alu -6 306 162 764 150 0 16 chr2 227601017 227601144 -23086710 + 7SK RNA RNA 1 125 -68 455 90 15 0 chr2 227601180 227601247 -23086607 + 7SK RNA RNA 121 188 -5 1061 176 0 37 chr2 227601247 227601434 -23086420 - AluJ SINE Alu -132 180 1 1224 183 42 90 chr2 227601435 227601653 -23086201 - MLT1D LTR MaLR -166 339 143 2078 162 3 0 chr2 227601653 227601961 -23085893 + AluJb SINE Alu 1 309 -3 1224 183 42 90 chr2 227601961 227602098 -23085756 - MLT1D LTR MaLR -362 143 1 1513 124 9 115 chr2 227602209 227602325 -23085529 - MER44D DNA MER2_type -1883 608 481 1250 118 113 0 chr2 227602325 227602428 -23085426 + MER30 DNA MER1_type 5 95 -135 2414 89 3 0 chr2 227602428 227602731 -23085123 - AluSx SINE Alu -8 304 1 1250 118 113 0 chr2 227602731 227602830 -23085024 + MER30 DNA MER1_type 95 230 0 1513 124 9 115 chr2 227602830 227602881 -23084973 - MER44D DNA MER2_type -2010 481 426 2139 120 10 0 chr2 227602881 227603189 -23084665 + AluSx SINE Alu 1 311 -1 1513 124 9 115 chr2 227603189 227603357 -23084497 - MER44D DNA MER2_type -2065 426 38 2665 146 88 34 chr2 227603357 227603512 -23084342 + MER41C LTR ERV1 1 146 -408 2498 80 3 0 chr2 227603512 227603812 -23084042 - AluY SINE Alu -10 301 1 2665 146 88 34 chr2 227603812 227604058 -23083796 + MER41C LTR ERV1 146 439 -115 1918 125 66 0 chr2 227604058 227604330 -23083524 - AluSx SINE Alu -22 290 1 2665 146 88 34 chr2 227604330 227604453 -23083401 + MER41C LTR ERV1 439 554 0 20638 121 20 15 chr2 227604453 227606447 -23081407 + MER41C-int LTR ERV1 1 1985 -5771 2501 90 3 6 chr2 227606447 227606759 -23081095 + AluSx SINE Alu 1 311 -1 20638 121 20 15 chr2 227606759 227606877 -23080977 + MER41C-int LTR ERV1 1985 2101 -5655 1321 77 28 0 chr2 227606877 227607102 -23080752 + L1PA8 LINE L1 5976 6205 0 20638 121 20 15 chr2 227607102 227607968 -23079886 + MER41C-int LTR ERV1 2101 2999 -4757 2420 108 0 0 chr2 227607968 227608275 -23079579 - AluSx SINE Alu -5 307 1 20638 121 20 15 chr2 227608275 227608509 -23079345 + MER41C-int LTR ERV1 2999 3230 -4526 10009 108 11 17 chr2 227608489 227609913 -23077941 + PRIMA41-int LTR ERV1 5258 6675 -1081 * 2414 74 0 0 chr2 227609913 227610224 -23077630 - AluY SINE Alu 0 311 1 10009 108 11 17 chr2 227610224 227610311 -23077543 + PRIMA41-int LTR ERV1 6675 6761 -995 1561 156 19 12 chr2 227610311 227610567 -23077287 - AluJb SINE Alu -54 258 1 765 272 63 17 chr2 227610621 227610717 -23077137 + MIR SINE MIR 3 93 -169 2358 105 0 0 chr2 227610717 227611021 -23076833 - AluSg SINE Alu -6 304 1 765 272 63 17 chr2 227611021 227611163 -23076691 + MIR SINE MIR 93 252 -10 2289 93 0 0 chr2 227611184 227611493 -23076361 + AluSg SINE Alu 2 310 0 702 189 16 0 chr2 227611517 227611644 -23076210 + FLAM_C SINE Alu 1 129 -4 23 0 0 0 chr2 227611644 227611667 -23076187 + AT_rich Low_complexity Low_complexity 1 23 0 2414 93 3 0 chr2 227612031 227612331 -23075523 + AluSg SINE Alu 1 301 -9 855 191 7 7 chr2 227612459 227612611 -23075243 + AluJb SINE Alu 156 307 -5 743 169 0 23 chr2 227613221 227613351 -23074503 - FLAM_C SINE Alu -11 132 6 269 275 158 17 chr2 227613447 227613567 -23074287 + MLT1K LTR MaLR 379 515 -73 1906 104 86 14 chr2 227613592 227613870 -23073984 - AluSx SINE Alu -14 298 1 363 23 0 0 chr2 227615242 227615286 -23072568 + (CA)n Simple_repeat Simple_repeat 2 45 0 329 272 32 4 chr2 227617521 227617670 -23070184 - L1ME LINE L1 -567 5595 5438 2043 161 0 0 chr2 227617693 227618004 -23069850 - AluJo SINE Alu -1 311 1 2018 68 48 41 chr2 227618013 227618308 -23069546 - AluY SINE Alu -14 297 1 290 349 0 0 chr2 227618400 227618486 -23069368 + GA-rich Low_complexity Low_complexity 3 88 0 372 266 172 16 chr2 227618634 227618762 -23069092 - MIR3 SINE MIR -45 163 16 537 303 33 50 chr2 227619111 227619340 -23068514 - MIR SINE MIR -25 237 1 522 113 0 0 chr2 227619950 227620047 -23067807 + (CA)n Simple_repeat Simple_repeat 2 98 0 236 255 0 0 chr2 227620193 227620240 -23067614 + (CTGGGG)n Simple_repeat Simple_repeat 1 47 0 235 235 0 37 chr2 227620652 227620733 -23067121 + C-rich Low_complexity Low_complexity 2 79 0 292 237 114 61 chr2 227621895 227622026 -23065828 - MER5B DNA MER1_type -39 139 2 210 71 0 0 chr2 227622897 227622925 -23064929 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 2134 97 3 13 chr2 227622953 227623251 -23064603 + AluSx SINE Alu 1 295 -17 422 191 33 138 chr2 227623362 227623514 -23064340 - MIR3 SINE MIR -31 177 42 704 260 43 52 chr2 227625506 227625606 -23062248 - MIR SINE MIR -2 260 161 1605 113 5 0 chr2 227625606 227625828 -23062026 - AluSg/x SINE Alu -14 296 74 704 260 43 52 chr2 227625828 227625958 -23061896 - MIR SINE MIR -101 161 32 292 293 170 20 chr2 227626200 227626347 -23061507 + MER5A DNA MER1_type 7 175 -14 1836 143 34 3 chr2 227626911 227627205 -23060649 - AluSx SINE Alu -7 305 3 195 42 0 0 chr2 227627205 227627229 -23060625 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 650 146 19 10 chr2 227627230 227627333 -23060521 - FLAM_A SINE Alu -28 114 11 519 271 90 27 chr2 227627449 227627637 -23060217 - MIR SINE MIR -6 256 57 202 299 0 58 chr2 227627694 227627781 -23060073 + MER5A DNA MER1_type 3 84 -105 200 253 211 11 chr2 227627725 227627820 -23060034 - MER5A DNA MER1_type -22 167 54 * 256 302 175 8 chr2 227627816 227627942 -23059912 - L3 LINE CR1 -5 1572 1426 349 284 77 82 chr2 227629804 227629925 -23057929 - L2 LINE L2 -10 3303 3182 827 238 115 59 chr2 227629925 227630248 -23057606 + MER102b DNA MER1_type 1 341 0 349 284 77 82 chr2 227630248 227630309 -23057545 - L2 LINE L2 -131 3182 3122 188 355 71 41 chr2 227630400 227630569 -23057285 - L2 LINE L2 -85 3187 3014 574 233 84 6 chr2 227631771 227631944 -23055910 + MIR SINE MIR 75 261 -1 548 236 19 13 chr2 227631944 227632101 -23055753 + MER46C DNA MER2_type 2 159 -179 491 301 39 20 chr2 227632170 227632373 -23055481 + MER46C DNA MER2_type 131 337 -1 202 143 0 24 chr2 227632373 227632415 -23055439 + (TTA)n Simple_repeat Simple_repeat 3 43 0 813 277 44 26 chr2 227632982 227633253 -23054601 - L2 LINE L2 0 3313 3038 496 323 41 10 chr2 227633225 227633420 -23054434 + MIR SINE MIR 48 248 -14 * 593 303 70 5 chr2 227634838 227635023 -23052831 + MIR SINE MIR 2 198 -64 282 230 99 86 chr2 227636362 227636421 -23051433 + MIR SINE MIR 81 138 -124 1643 136 79 4 chr2 227636421 227636686 -23051168 + AluJo SINE Alu 1 285 -27 282 230 99 86 chr2 227636686 227636778 -23051076 + MIR SINE MIR 138 234 -28 * 537 294 73 28 chr2 227636766 227636984 -23050870 - MIR SINE MIR -15 247 20 644 270 96 9 chr2 227638493 227638723 -23049131 - MIR SINE MIR -3 259 10 922 300 134 13 chr2 227643109 227643762 -23044092 + L2 LINE L2 2574 3311 -2 2054 87 56 7 chr2 227644939 227645226 -23042628 + AluSg SINE Alu 1 301 -9 791 274 43 0 chr2 227646378 227646564 -23041290 - MER91A DNA MER1_type -2 194 1 372 282 81 35 chr2 227646773 227646947 -23040907 - MIR SINE MIR -61 201 20 22 0 0 0 chr2 227648341 227648363 -23039491 + GC_rich Low_complexity Low_complexity 1 22 0 197 290 32 43 chr2 227649256 227649349 -23038505 + MIR SINE MIR 49 140 -122 303 240 182 8 chr2 227649437 227649571 -23038283 - MIR SINE MIR -6 202 49 268 268 93 10 chr2 227649642 227649739 -23038115 - MIR SINE MIR -71 191 87 316 293 171 24 chr2 227650449 227650654 -23037200 + MIR SINE MIR 28 262 0 196 324 213 7 chr2 227650629 227650765 -23037089 - MIR SINE MIR -49 213 50 * 216 244 0 0 chr2 227653672 227653713 -23034141 + C-rich Low_complexity Low_complexity 3 43 0 185 346 49 0 chr2 227655559 227655640 -23032214 + L2 LINE L2 3212 3296 -17 2199 128 0 0 chr2 227655928 227656240 -23031614 + AluSx SINE Alu 1 312 0 234 215 0 0 chr2 227656339 227656418 -23031436 + (CA)n Simple_repeat Simple_repeat 1 79 0 632 161 18 6 chr2 227656433 227656601 -23031253 + (CA)n Simple_repeat Simple_repeat 1 170 0 250 179 18 0 chr2 227656620 227656676 -23031178 + (CA)n Simple_repeat Simple_repeat 1 57 0 456 35 0 0 chr2 227657178 227657236 -23030618 + (TGGA)n Simple_repeat Simple_repeat 2 59 0 997 269 82 7 chr2 227657302 227657725 -23030129 + LTR33 LTR ERVL 1 476 -45 1919 155 7 3 chr2 227657940 227658250 -23029604 - AluJb SINE Alu -1 311 1 474 310 132 39 chr2 227658255 227658610 -23029244 + L2 LINE L2 2836 3223 -49 200 209 23 0 chr2 227658622 227658665 -23029189 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 260 258 58 50 chr2 227658738 227658858 -23028996 - MIR3 SINE MIR -84 124 4 272 377 13 0 chr2 227659170 227659324 -23028530 + (CA)n Simple_repeat Simple_repeat 1 156 0 411 286 212 38 chr2 227660371 227660613 -23027241 + L2 LINE L2 2244 2443 -870 1765 165 0 53 chr2 227660613 227660934 -23026920 - AluJb SINE Alu -8 304 1 411 286 212 38 chr2 227660934 227661566 -23026288 + L2 LINE L2 2443 3275 -38 317 270 50 10 chr2 227662260 227662360 -23025494 - MIR SINE MIR -94 168 65 672 204 8 0 chr2 227662753 227662885 -23024969 - MIR SINE MIR -20 242 110 262 105 53 0 chr2 227712889 227712927 -22974927 - Alu SINE Alu -261 40 1 959 271 64 15 chr2 227712930 227713273 -22974581 - L2 LINE L2 -526 2788 2429 1591 125 16 19 chr2 227713824 227714080 -22973774 + AluSx SINE Alu 58 312 0 393 241 35 0 chr2 227714126 227714213 -22973641 - L2 LINE L2 0 3313 3224 213 336 15 66 chr2 227715453 227715590 -22972264 - MER5B DNA MER1_type -4 185 46 1179 163 0 111 chr2 227715601 227715694 -22972160 + AluJo SINE Alu 54 156 -156 2272 117 0 0 chr2 227715694 227716003 -22971851 + AluSc SINE Alu 1 309 0 1179 163 0 111 chr2 227716003 227716179 -22971675 + AluJo SINE Alu 156 293 -19 21 0 0 0 chr2 227716677 227716698 -22971156 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr2 227716698 227716724 -22971130 + (TTA)n Simple_repeat Simple_repeat 2 27 0 253 211 26 66 chr2 227716964 227717040 -22970814 - MLT1I LTR MaLR -17 392 320 1292 196 67 58 chr2 227717102 227717448 -22970406 - L1ME2 LINE L1 -1 6163 5815 253 244 70 47 chr2 227717451 227717537 -22970317 - MLT1J1 LTR MaLR -115 331 244 332 275 29 61 chr2 227717550 227717724 -22970130 - MLT1J2 LTR MaLR -204 205 38 2473 143 18 66 chr2 227717759 227717840 -22970014 - Tigger2a DNA MER2_type -2274 434 351 2229 92 3 3 chr2 227717840 227718122 -22969732 + AluSx SINE Alu 1 282 -30 250 33 0 0 chr2 227718122 227718152 -22969702 + (GAAAA)n Simple_repeat Simple_repeat 1 35 0 2473 143 18 66 chr2 227718152 227718524 -22969330 - Tigger2a DNA MER2_type -2357 351 2 587 241 6 48 chr2 227718724 227718890 -22968964 - MIR SINE MIR -73 189 31 501 291 40 6 chr2 227719747 227719922 -22967932 - MIR SINE MIR -2 260 80 293 325 60 17 chr2 227720019 227720136 -22967718 - L2 LINE L2 0 3272 3151 366 340 117 32 chr2 227720219 227720560 -22967294 - L2 LINE L2 -4 3268 2899 234 0 0 0 chr2 227721406 227721432 -22966422 + (A)n Simple_repeat Simple_repeat 1 26 0 207 162 0 0 chr2 227722305 227722342 -22965512 + (TA)n Simple_repeat Simple_repeat 2 38 0 194 368 0 23 chr2 227722550 227722637 -22965217 + MIR SINE MIR 68 152 -110 2334 94 10 3 chr2 227722795 227723104 -22964750 - AluSq SINE Alu -2 311 1 534 233 17 0 chr2 227723541 227723661 -22964193 - FLAM_A SINE Alu -5 137 16 285 151 0 0 chr2 227723885 227723938 -22963916 + (TA)n Simple_repeat Simple_repeat 2 54 0 322 290 83 32 chr2 227724152 227724369 -22963485 - L1MC4a LINE L1 -1871 5937 5710 213 247 20 47 chr2 227724380 227724530 -22963324 + T-rich Low_complexity Low_complexity 1 146 0 879 280 126 33 chr2 227724745 227725449 -22962405 - HAL1b LINE L1 -535 813 44 2691 91 6 3 chr2 227727425 227727788 -22960066 + THE1B LTR MaLR 1 364 0 972 269 21 8 chr2 227728015 227728253 -22959601 - MIR SINE MIR -10 252 12 193 333 43 0 chr2 227728337 227728430 -22959424 - MIR3 SINE MIR -1 207 111 235 315 56 34 chr2 227729573 227729662 -22958192 + L2 LINE L2 3150 3240 -32 204 195 0 0 chr2 227729808 227729849 -22958005 - L2 LINE L2 -2 3311 3271 217 289 67 11 chr2 227729899 227729989 -22957865 - MIR SINE MIR -77 131 37 191 278 56 0 chr2 227730438 227730492 -22957362 + L2 LINE L2 3216 3272 0 1648 210 42 21 chr2 227730706 227731139 -22956715 + Charlie1b DNA MER1_type 1 442 -81 956 146 4 55 chr2 227731260 227731507 -22956347 - MER4A LTR ERV1 -125 539 247 282 264 0 100 chr2 227731724 227731864 -22955990 - MER4A LTR ERV1 -167 497 372 771 122 70 52 chr2 227731933 227732105 -22955749 - MER4A LTR ERV1 -489 175 1 344 343 84 42 chr2 227732110 227732489 -22955365 - L2 LINE L2 -472 2842 2448 761 280 58 0 chr2 227732570 227732777 -22955077 + MIR SINE MIR 38 256 -6 2133 132 10 0 chr2 227732993 227733296 -22954558 + AluSx SINE Alu 1 306 -6 412 264 8 8 chr2 227734325 227734454 -22953400 + L1MC5 LINE L1 7314 7442 -519 225 65 0 0 chr2 227734483 227734514 -22953340 + (TAA)n Simple_repeat Simple_repeat 1 31 0 1777 119 4 47 chr2 227734546 227734823 -22953031 - AluSx SINE Alu -11 301 37 284 293 52 37 chr2 227734875 227735066 -22952788 + L1MC4 LINE L1 7711 7904 -138 340 281 27 112 chr2 227735214 227735474 -22952380 - L2 LINE L2 0 3313 3076 1706 212 53 2 chr2 227735829 227736225 -22951629 + MLT2C2 LTR ERVL 1 416 -48 292 324 18 13 chr2 227736331 227736468 -22951386 - MIR SINE MIR -63 145 37 1992 81 0 19 chr2 227737438 227737697 -22950157 - AluY SINE Alu -18 293 40 243 378 31 5 chr2 227737754 227737947 -22949907 - MIR SINE MIR -2 260 63 259 378 0 22 chr2 227739188 227739323 -22948531 + MIR SINE MIR 16 147 -61 689 243 53 44 chr2 227741480 227741686 -22946168 - MER63A DNA MER1_type -1 209 2 1855 130 59 24 chr2 227742654 227742992 -22944862 - LTR45B LTR ERV1 -131 358 9 27 29 0 0 chr2 227743331 227743365 -22944489 + AT_rich Low_complexity Low_complexity 1 34 0 231 217 61 104 chr2 227744489 227744604 -22943250 - MER94 DNA DNA -2 132 23 405 148 284 12 chr2 227744807 227744976 -22942878 + L1M4 LINE L1 5008 5222 -924 207 318 114 51 chr2 227745222 227745398 -22942456 - MIR SINE MIR -73 189 3 2103 140 3 0 chr2 227745421 227745721 -22942133 + AluSx SINE Alu 1 301 -11 24 32 0 0 chr2 227746493 227746524 -22941330 + AT_rich Low_complexity Low_complexity 1 31 0 221 185 0 19 chr2 227746883 227746937 -22940917 + A-rich Low_complexity Low_complexity 6 58 0 339 281 22 15 chr2 227746939 227747074 -22940780 + MER103 DNA DNA 1 136 -30 2292 101 0 0 chr2 227747424 227747720 -22940134 + AluSx SINE Alu 1 296 -16 839 264 132 12 chr2 227748023 227748364 -22939490 + MLT1J2 LTR MaLR 25 406 -44 643 229 128 4 chr2 227749279 227749528 -22938326 - MER69 DNA AcHobo 0 2526 2247 590 165 250 0 chr2 227749792 227749980 -22937874 - MER69 DNA AcHobo -271 2255 2021 941 231 82 30 chr2 227749999 227750302 -22937552 - MER69 DNA AcHobo -668 558 240 1220 202 109 4 chr2 227751561 227751678 -22936176 + AluJo SINE Alu 1 104 -208 405 0 0 0 chr2 227751678 227751723 -22936131 + (CA)n Simple_repeat Simple_repeat 2 46 0 1220 202 109 4 chr2 227751723 227751852 -22936002 + AluJo SINE Alu 104 273 -39 234 284 21 21 chr2 227751967 227752062 -22935792 - MLT1F LTR MaLR -447 95 1 255 114 0 0 chr2 227752231 227752275 -22935579 + (TG)n Simple_repeat Simple_repeat 2 45 0 735 195 40 0 chr2 227752311 227752460 -22935394 - Tigger2 DNA MER2_type 0 2718 2564 * 912 162 99 5 chr2 227752459 227752650 -22935204 - Tigger2 DNA MER2_type -2508 210 2 249 200 0 0 chr2 227752787 227752837 -22935017 + MIR SINE MIR 93 142 -120 22 0 0 0 chr2 227753072 227753094 -22934760 + AT_rich Low_complexity Low_complexity 1 22 0 547 273 42 55 chr2 227753369 227753402 -22934452 + L2 LINE L2 3077 3109 -204 1248 252 76 6 chr2 227753402 227753743 -22934111 + MLT1A1 LTR MaLR 1 365 0 547 273 42 55 chr2 227753743 227753947 -22933907 + L2 LINE L2 3109 3311 -2 2234 121 0 0 chr2 227754094 227754400 -22933454 - AluSg SINE Alu -4 306 1 245 287 128 0 chr2 227754611 227754705 -22933149 + MIR SINE MIR 157 262 0 294 350 0 29 chr2 227755141 227755170 -22932684 - MIR SINE MIR -65 143 115 2282 96 3 10 chr2 227755170 227755482 -22932372 + AluSx SINE Alu 1 310 -2 294 350 0 29 chr2 227755482 227755555 -22932299 - MIR SINE MIR -93 115 44 302 287 128 0 chr2 227755885 227755979 -22931875 - L1ME LINE L1 -469 5652 5547 344 252 114 41 chr2 227756054 227756280 -22931574 - L1ME LINE L1 -732 5430 5191 234 167 44 22 chr2 227756327 227756417 -22931437 + (TA)n Simple_repeat Simple_repeat 1 92 0 193 107 87 27 chr2 227756418 227756567 -22931287 + (TTATA)n Simple_repeat Simple_repeat 4 161 0 * 333 159 12 25 chr2 227756543 227756706 -22931148 + (TA)n Simple_repeat Simple_repeat 1 161 0 585 179 42 11 chr2 227756726 227757079 -22930775 + (TA)n Simple_repeat Simple_repeat 1 363 0 36 87 0 0 chr2 227757081 227757173 -22930681 + AT_rich Low_complexity Low_complexity 1 92 0 1849 150 0 4 chr2 227757534 227757808 -22930046 + AluSx SINE Alu 1 273 -39 433 133 0 53 chr2 227757808 227757921 -22929933 + (GAAA)n Simple_repeat Simple_repeat 1 107 0 445 264 28 49 chr2 227758070 227758214 -22929640 + MIR SINE MIR 65 205 -57 510 301 116 43 chr2 227758493 227759029 -22928825 - L2 LINE L2 -90 3223 2599 1623 110 151 39 chr2 227759306 227759473 -22928381 + THE1C LTR MaLR 1 148 -227 393 39 0 0 chr2 227759473 227759524 -22928330 + (TC)n Simple_repeat Simple_repeat 1 51 0 1623 110 151 39 chr2 227759524 227759693 -22928161 + THE1C LTR MaLR 148 375 0 1511 186 43 65 chr2 227759699 227759998 -22927856 - MLT1B LTR MaLR -1 389 85 2092 89 45 17 chr2 227759998 227760289 -22927565 - AluSq SINE Alu -14 299 1 2120 126 0 0 chr2 227760289 227760590 -22927264 - AluY SINE Alu -10 301 1 2138 125 7 0 chr2 227760590 227760894 -22926960 - AluSx SINE Alu -6 306 1 1511 186 43 65 chr2 227760894 227760990 -22926864 - MLT1B LTR MaLR -302 88 1 240 239 239 23 chr2 227762047 227762135 -22925719 + MIR SINE MIR 43 149 -113 709 244 25 20 chr2 227762616 227762817 -22925037 + MIR SINE MIR 61 262 0 1907 180 68 3 chr2 227763637 227764004 -22923850 - MSTD LTR MaLR 0 396 6 1271 134 43 22 chr2 227764295 227764526 -22923328 - MER46A DNA MER2_type 0 236 1 28 0 0 0 chr2 227765758 227765786 -22922068 + AT_rich Low_complexity Low_complexity 1 28 0 1522 108 28 5 chr2 227765786 227766024 -22921830 + AluSg/x SINE Alu 66 308 0 242 225 42 0 chr2 227766590 227766661 -22921193 + (TA)n Simple_repeat Simple_repeat 1 74 0 202 222 0 0 chr2 227767243 227767288 -22920566 - L2 LINE L2 -8 3305 3261 2234 137 3 18 chr2 227767885 227768227 -22919627 - MER1B DNA MER1_type 0 337 1 316 404 6 12 chr2 227768254 227768420 -22919434 - MIR3 SINE MIR -13 195 31 967 264 89 9 chr2 227768563 227768889 -22918965 + MLT1H LTR MaLR 1 352 -197 1585 205 19 24 chr2 227769392 227769768 -22918086 + MLT1A2 LTR MaLR 1 374 0 594 273 72 19 chr2 227770422 227770631 -22917223 - MER58A DNA MER1_type -4 220 1 231 342 0 0 chr2 227770638 227770717 -22917137 + MIR SINE MIR 181 259 -3 740 171 8 0 chr2 227772039 227772156 -22915698 + AluJb SINE Alu 1 118 -194 584 220 75 28 chr2 227772610 227772689 -22915165 + L1ME3A LINE L1 2218 2292 -3854 1889 124 86 122 chr2 227772689 227773060 -22914794 + MSTB LTR MaLR 1 355 -71 2048 129 36 3 chr2 227773060 227773362 -22914492 - AluSx SINE Alu 0 312 1 1889 124 86 122 chr2 227773362 227773432 -22914422 + MSTB LTR MaLR 355 426 0 584 220 75 28 chr2 227773432 227773566 -22914288 + L1ME3A LINE L1 2292 2441 -3705 597 272 5 0 chr2 227773578 227773769 -22914085 + L1PB1 LINE L1 6 197 -6666 * 8478 163 29 4 chr2 227773766 227777000 -22910854 + L1PB1 LINE L1 1392 4705 -2157 2412 133 10 0 chr2 227777001 227777386 -22910468 + L1PB1 LINE L1 6479 6867 0 356 248 9 0 chr2 227777389 227777502 -22910352 + L1ME3A LINE L1 2428 2541 -3605 4879 268 66 21 chr2 227777776 227778883 -22908971 + L1ME3A LINE L1 2636 3692 -2454 369 0 0 0 chr2 227778883 227778924 -22908930 + (TA)n Simple_repeat Simple_repeat 1 41 0 4879 268 66 21 chr2 227778924 227780333 -22907521 + L1ME3A LINE L1 3692 5265 -881 788 253 15 15 chr2 227780359 227780561 -22907293 - MLT1A2 LTR MaLR 0 374 173 560 168 24 18 chr2 227780574 227780741 -22907113 + GA-rich Low_complexity Low_complexity 2 169 0 2188 65 0 7 chr2 227781523 227781800 -22906054 + AluY SINE Alu 37 311 0 24 0 0 0 chr2 227782364 227782388 -22905466 + AT_rich Low_complexity Low_complexity 1 24 0 315 292 54 54 chr2 227782412 227782597 -22905257 - MIR SINE MIR -12 250 66 342 200 200 0 chr2 227783860 227783965 -22903889 + L2 LINE L2 3188 3313 0 475 349 19 5 chr2 227784028 227784237 -22903617 + MIR SINE MIR 51 262 0 389 352 0 0 chr2 227784303 227784431 -22903423 + MIR3 SINE MIR 45 172 -36 468 279 18 102 chr2 227784457 227784790 -22903064 - MER102a DNA MER1_type -2 328 24 284 303 18 28 chr2 227786187 227786296 -22901558 + MIR SINE MIR 37 144 -118 300 303 22 0 chr2 227787176 227787265 -22900589 - MIR SINE MIR -80 128 38 318 221 142 18 chr2 227787834 227787947 -22899907 - L1ME4a LINE L1 -33 6088 5962 405 266 130 13 chr2 227788452 227788606 -22899248 - MIR SINE MIR -12 250 79 1157 202 105 30 chr2 227788610 227788942 -22898912 + MLT1D LTR MaLR 3 359 -146 322 353 42 50 chr2 227790023 227790362 -22897492 + L1ME3A LINE L1 5524 5866 -304 1997 138 23 52 chr2 227790411 227790758 -22897096 - MER1B DNA MER1_type 0 337 1 584 246 14 7 chr2 227790868 227791006 -22896848 + MIR SINE MIR 102 240 -22 416 239 284 0 chr2 227791914 227792048 -22895806 - MER5B DNA MER1_type -6 172 1 198 103 0 0 chr2 227792443 227792472 -22895382 + (TATATG)n Simple_repeat Simple_repeat 2 30 0 420 143 0 0 chr2 227792479 227792549 -22895305 + (CA)n Simple_repeat Simple_repeat 2 71 0 183 302 107 47 chr2 227793615 227793764 -22894090 - L3 LINE CR1 -7 1570 1413 1846 210 36 86 chr2 227793971 227794337 -22893517 + MER90 LTR ERV1 1 327 -248 2281 104 3 0 chr2 227794337 227794645 -22893209 - AluSg SINE Alu -1 309 1 1846 210 36 86 chr2 227794645 227794883 -22892971 + MER90 LTR ERV1 327 575 0 353 310 65 32 chr2 227795019 227795174 -22892680 - MIR3 SINE MIR -44 164 5 28 0 0 0 chr2 227795500 227795528 -22892326 + AT_rich Low_complexity Low_complexity 1 28 0 452 283 124 80 chr2 227795957 227796434 -22891420 - L1ME4a LINE L1 -214 5907 5410 21 36 0 0 chr2 227796870 227796898 -22890956 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 227797972 227797995 -22889859 + AT_rich Low_complexity Low_complexity 1 23 0 218 259 0 19 chr2 227798241 227798295 -22889559 + (CA)n Simple_repeat Simple_repeat 2 54 0 408 260 29 0 chr2 227798523 227798627 -22889227 - MIR SINE MIR -3 259 153 1456 133 133 58 chr2 227799018 227799348 -22888506 - MSTA LTR MaLR 0 428 74 321 171 43 0 chr2 227799449 227799519 -22888335 + AluJ/FRAM SINE Alu 221 293 -9 231 179 0 0 chr2 227799546 227799613 -22888241 + (CA)n Simple_repeat Simple_repeat 1 67 0 2093 142 0 16 chr2 227800001 227800319 -22887535 + AluSq SINE Alu 1 313 0 550 188 118 32 chr2 227800332 227800518 -22887336 - MER69 DNA AcHobo -2324 202 1 286 296 56 19 chr2 227801009 227801117 -22886737 + L2 LINE L2 3202 3313 0 354 244 0 0 chr2 227801245 227801335 -22886519 - L1ME LINE L1 -474 5647 5558 588 243 59 72 chr2 227801335 227801557 -22886297 - L2 LINE L2 -3 3310 3092 758 276 80 11 chr2 227801639 227801925 -22885929 + ERVL LTR ERVL 1948 2253 -3511 1392 322 97 7 chr2 227801952 227802636 -22885218 + ERVL LTR ERVL 4580 5324 -440 566 242 142 0 chr2 227802713 227802995 -22884859 + LTR50 LTR ERVL 389 795 0 924 36 0 0 chr2 227803140 227803279 -22884575 + AluY SINE Alu 175 313 0 849 159 12 25 chr2 227803280 227803443 -22884411 - L1MD2 LINE L1 -8 6351 6191 243 0 0 0 chr2 227803650 227803677 -22884177 + (GA)n Simple_repeat Simple_repeat 1 27 0 361 306 37 58 chr2 227803709 227803951 -22883903 - L2 LINE L2 -247 3066 2830 533 336 36 5 chr2 227804015 227804238 -22883616 - L3 LINE CR1 -148 1429 1200 245 259 0 0 chr2 227804576 227804630 -22883224 - MER5A DNA MER1_type -8 181 128 2046 141 0 0 chr2 227806145 227806456 -22881398 - AluSx SINE Alu 0 311 1 1118 224 32 12 chr2 227806579 227806829 -22881025 + MIR SINE MIR 8 262 0 206 230 27 0 chr2 227806976 227807050 -22880804 + CT-rich Low_complexity Low_complexity 2 77 0 25 51 0 0 chr2 227808764 227808803 -22879051 + AT_rich Low_complexity Low_complexity 1 39 0 294 320 31 0 chr2 227808835 227808932 -22878922 - MIR SINE MIR -106 156 57 21767 147 13 14 chr2 227809093 227812289 -22875565 - L1MA3 LINE L1 0 7724 4528 2518 61 0 0 chr2 227812289 227812584 -22875270 + AluY SINE Alu 1 295 -16 21767 147 13 14 chr2 227812584 227816907 -22870947 - L1MA3 LINE L1 -3196 4528 14 579 303 62 19 chr2 227817250 227817461 -22870393 + MIR SINE MIR 11 230 -32 504 0 0 0 chr2 227819015 227819071 -22868783 + (TTCC)n Simple_repeat Simple_repeat 2 57 0 347 314 22 7 chr2 227819216 227819353 -22868501 + L1ME4a LINE L1 5728 5866 -255 2290 104 3 0 chr2 227819441 227819749 -22868105 + AluSx SINE Alu 1 309 -3 519 292 115 18 chr2 227819755 227819981 -22867873 - MIR SINE MIR -8 254 7 288 196 34 108 chr2 227820186 227820334 -22867520 + L1ME4a LINE L1 5981 6117 -4 21 0 0 0 chr2 227821170 227821191 -22866663 + AT_rich Low_complexity Low_complexity 1 21 0 250 365 34 53 chr2 227821434 227821642 -22866212 - L3 LINE CR1 -829 748 545 561 248 142 13 chr2 227822700 227822926 -22864928 + L1ME LINE L1 5505 5759 -362 21 0 0 0 chr2 227823190 227823211 -22864643 + AT_rich Low_complexity Low_complexity 1 21 0 625 258 32 21 chr2 227823657 227823843 -22864011 - MIR SINE MIR -10 252 65 250 309 44 7 chr2 227823858 227823994 -22863860 + L1ME LINE L1 5691 5831 -290 838 177 30 109 chr2 227824024 227824290 -22863564 - L1MB8 LINE L1 -6 6172 5928 779 199 26 0 chr2 227824296 227824452 -22863402 - L1MA6 LINE L1 -239 6061 5902 1691 138 205 11 chr2 227826967 227827323 -22860531 - MSTA LTR MaLR -3 425 1 545 232 72 7 chr2 227827623 227827761 -22860093 + MIR SINE MIR 113 259 -3 210 407 0 0 chr2 227828066 227828157 -22859697 + MIR SINE MIR 41 131 -77 381 366 6 6 chr2 227828971 227829132 -22858722 + MIR3 SINE MIR 39 199 -9 1857 121 49 80 chr2 227831483 227831870 -22855984 + THE1C LTR MaLR 1 375 0 294 290 56 19 chr2 227832174 227832281 -22855573 + MIR SINE MIR 36 146 -62 319 322 56 28 chr2 227832372 227832515 -22855339 - MIR3 SINE MIR -48 160 14 264 336 73 9 chr2 227832706 227832816 -22855038 + L2 LINE L2 3154 3270 -2 293 308 0 66 chr2 227833048 227833139 -22854715 + MIR SINE MIR 15 99 -163 22 35 0 0 chr2 227833811 227833840 -22854014 + AT_rich Low_complexity Low_complexity 1 29 0 1330 193 0 36 chr2 227834149 227834476 -22853378 - AluJo SINE Alu 0 374 57 598 253 37 6 chr2 227834978 227835140 -22852714 + MIR SINE MIR 90 256 -6 198 300 20 0 chr2 227835320 227835370 -22852484 + L2 LINE L2 3136 3186 -86 29 28 0 0 chr2 227835402 227835438 -22852416 + AT_rich Low_complexity Low_complexity 1 36 0 199 300 43 14 chr2 227838038 227838108 -22849746 - MIR SINE MIR -109 153 82 1075 133 0 0 chr2 227838195 227838370 -22849484 - AluSg/x SINE Alu 0 305 131 861 100 75 0 chr2 227838370 227838490 -22849364 + AluSg1 SINE Alu 16 144 -165 9803 45 0 2 chr2 227840181 227841390 -22846464 - L1PA5 LINE L1 -971 5175 3969 7271 50 0 1 chr2 227841390 227842369 -22845485 + L1PA5 LINE L1 5177 6154 0 459 70 113 14 chr2 227842454 227842525 -22845329 - MADE1 DNA Mariner -1 79 2 520 259 59 55 chr2 227842791 227843263 -22844591 + L1M4 LINE L1 2762 3235 -2911 1301 303 109 24 chr2 227843438 227844616 -22843238 + L1M4 LINE L1 3422 4768 -1378 4254 110 45 3 chr2 227844616 227845263 -22842591 + L1PA16 LINE L1 5480 6153 -13 1301 303 109 24 chr2 227845263 227845654 -22842200 + L1M4 LINE L1 4768 5124 -1022 349 294 59 0 chr2 227847290 227847409 -22840445 + LTR16A1 LTR ERVL 328 453 -4 347 292 0 0 chr2 227848296 227848343 -22839511 + MER3 DNA MER1_type 2 48 -161 520 210 8 48 chr2 227848343 227848467 -22839387 - MER3 DNA MER1_type -1 208 90 210 279 117 99 chr2 227848528 227848639 -22839215 - MIR SINE MIR -71 137 25 3176 147 19 8 chr2 227848863 227849727 -22838127 + L1MA7 LINE L1 4811 5682 -609 1052 157 97 0 chr2 227849723 227849940 -22837914 + L1MA7 LINE L1 6054 6291 0 * 319 250 24 12 chr2 227850058 227850142 -22837712 - LTR33 LTR ERVL 0 521 437 193 330 55 28 chr2 227850356 227850465 -22837389 - L2 LINE L2 -2 3311 3200 529 291 159 36 chr2 227850690 227850910 -22836944 + L2 LINE L2 2281 2527 -787 929 206 168 29 chr2 227850918 227851228 -22836626 - MLT1A1 LTR MaLR -12 353 1 522 236 16 0 chr2 227851229 227851352 -22836502 + L2 LINE L2 2525 2649 -665 235 141 62 16 chr2 227851460 227851524 -22836330 + T-rich Low_complexity Low_complexity 3 69 0 195 247 186 21 chr2 227851642 227851739 -22836115 - MIR SINE MIR -37 225 113 184 400 92 0 chr2 227851902 227852032 -22835822 - L2 LINE L2 -4 3268 3127 272 200 17 17 chr2 227853321 227853381 -22834473 + MLT1J2 LTR MaLR 67 126 -324 232 316 72 14 chr2 227853526 227853665 -22834189 + MLT1I LTR MaLR 249 395 -14 363 244 205 11 chr2 227856587 227856739 -22831115 + MER5A DNA MER1_type 4 189 0 310 264 11 0 chr2 227856830 227856921 -22830933 + L1ME LINE L1 5711 5802 -360 345 211 133 0 chr2 227857847 227857937 -22829917 - MER5B DNA MER1_type 0 178 77 2111 112 31 0 chr2 227859217 227859511 -22828343 + AluSc SINE Alu 1 303 -6 22 35 0 0 chr2 227859595 227859624 -22828230 + AT_rich Low_complexity Low_complexity 1 29 0 8822 144 35 20 chr2 227859630 227860376 -22827478 - L1MA2 LINE L1 0 6304 5571 2050 116 7 3 chr2 227860376 227860661 -22827193 - AluSq SINE Alu -27 286 1 8822 144 35 20 chr2 227860661 227862660 -22825194 - L1MA2 LINE L1 -733 5571 3512 1650 212 61 22 chr2 227862915 227863073 -22824781 + MSTB LTR MaLR 1 151 -275 2717 26 0 0 chr2 227863073 227863379 -22824475 - AluY SINE Alu -5 306 1 1650 212 61 22 chr2 227863379 227863630 -22824224 + MSTB LTR MaLR 151 426 0 8537 198 23 15 chr2 227863630 227865254 -22822600 + MSTB-int LTR MaLR 1 1637 -14 1893 176 34 77 chr2 227865260 227865460 -22822394 + MSTB LTR MaLR 1 208 -218 1878 153 11 0 chr2 227865460 227865777 -22822077 + AluSx SINE Alu 1 320 0 1893 176 34 77 chr2 227865777 227866019 -22821835 + MSTB LTR MaLR 208 425 -1 435 239 0 18 chr2 227866024 227866187 -22821667 - L1M4 LINE L1 -2878 3268 3109 3067 150 2 10 chr2 227866187 227866706 -22821148 - L1PA15 LINE L1 -5 6160 5646 852 160 14 6 chr2 227866706 227866863 -22820991 - THE1C LTR MaLR 0 375 216 994 186 47 19 chr2 227866979 227867194 -22820660 - THE1C LTR MaLR -154 221 1 9184 134 42 14 chr2 227867194 227868732 -22819122 - THE1C-int LTR MaLR 0 1580 1 2013 163 36 6 chr2 227868732 227869094 -22818760 - THE1C LTR MaLR 0 375 3 249 108 0 0 chr2 227869116 227869153 -22818701 + (TA)n Simple_repeat Simple_repeat 1 37 0 1399 108 22 52 chr2 227869152 227869383 -22818471 - AluSp SINE Alu -5 308 85 13323 199 19 12 chr2 227869383 227869508 -22818346 - L1PA15 LINE L1 -543 5622 5499 228 35 0 0 chr2 227869508 227869537 -22818317 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 13323 199 19 12 chr2 227869537 227872869 -22814985 - L1PA15 LINE L1 -666 5499 2144 233 191 0 0 chr2 227873198 227873245 -22814609 + MER113 DNA MER1_type? 2 48 -473 426 267 150 46 chr2 227873282 227873675 -22814179 + MER113 DNA MER1_type? 45 478 -43 222 62 0 0 chr2 227875852 227875884 -22811970 + (TC)n Simple_repeat Simple_repeat 2 33 0 304 338 30 8 chr2 227877033 227877166 -22810688 + MIR SINE MIR 116 251 -11 279 0 0 0 chr2 227877186 227877217 -22810637 + (CAT)n Simple_repeat Simple_repeat 3 33 0 1558 131 128 45 chr2 227877847 227878184 -22809670 - MLT1A1 LTR MaLR 0 365 1 304 369 0 0 chr2 227878359 227878462 -22809392 + MIR3 SINE MIR 73 175 -33 214 172 16 31 chr2 227879376 227879440 -22808414 + (CA)n Simple_repeat Simple_repeat 2 64 0 27155 79 8 3 chr2 227879563 227883381 -22804473 - L1P LINE L1 -2311 3835 1 4091 194 7 4 chr2 227883383 227884417 -22803437 - L1MEc LINE L1 -3060 4505 3467 316 162 0 27 chr2 227885343 227885417 -22802437 + CT-rich Low_complexity Low_complexity 2 73 0 240 91 0 0 chr2 227885420 227885453 -22802401 + (TTCTCC)n Simple_repeat Simple_repeat 4 36 0 3379 254 72 22 chr2 227885516 227886747 -22801107 - L1MEc LINE L1 -5073 2673 1381 294 241 84 24 chr2 227888178 227888261 -22799593 - L2 LINE L2 -38 3275 3188 679 309 171 27 chr2 227889956 227890188 -22797666 + HERV16 LTR ERVL 1659 1856 -3140 2150 122 48 20 chr2 227890188 227890542 -22797312 + THE1B LTR MaLR 1 364 0 679 309 171 27 chr2 227890542 227890759 -22797095 + HERV16 LTR ERVL 1856 2173 -2823 388 231 46 50 chr2 227890758 227890908 -22796946 + HERV16 LTR ERVL 3030 3177 -2308 * 836 313 75 54 chr2 227890990 227891839 -22796015 + HERV16 LTR ERVL 4261 5174 -590 1134 200 94 22 chr2 227891839 227892064 -22795790 + MER2 DNA MER2_type 1 257 -87 2165 111 10 7 chr2 227892064 227892361 -22795493 - AluY SINE Alu -13 298 1 1134 200 94 22 chr2 227892361 227892455 -22795399 + MER2 DNA MER2_type 257 343 -1 836 313 75 54 chr2 227892455 227892609 -22795245 + HERV16 LTR ERVL 5174 5323 -441 1127 264 76 20 chr2 227892811 227893208 -22794646 + LTR16A LTR ERVL 26 444 -6 2071 127 3 10 chr2 227894970 227895284 -22792570 - AluSx SINE Alu 0 312 1 280 189 11 11 chr2 227895991 227896086 -22791768 + GA-rich Low_complexity Low_complexity 1 95 0 287 48 0 24 chr2 227896916 227896958 -22790896 + (CAA)n Simple_repeat Simple_repeat 2 42 0 688 220 35 12 chr2 227898358 227898531 -22789323 - MER69A DNA AcHobo 0 177 1 277 299 140 28 chr2 227898858 227899028 -22788826 - MIR SINE MIR -62 146 1 678 127 25 0 chr2 227899550 227899668 -22788186 + L1MA4 LINE L1 6139 6259 -41 590 75 21 0 chr2 227899771 227899865 -22787989 + L1MA4 LINE L1 6204 6299 -1 706 306 55 8 chr2 227901802 227902037 -22785817 + MIR SINE MIR 6 251 -11 522 308 104 9 chr2 227903024 227903245 -22784609 + MIR SINE MIR 21 262 0 1192 217 106 37 chr2 227904092 227904442 -22783412 - MLT1A2 LTR MaLR 0 374 1 302 271 76 8 chr2 227905263 227905381 -22782473 + MIR3 SINE MIR 83 208 0 2243 106 42 31 chr2 227905937 227906297 -22781557 + THE1B LTR MaLR 1 364 0 295 300 150 0 chr2 227906353 227906513 -22781341 + MIR SINE MIR 78 261 -1 207 0 0 0 chr2 227906977 227907000 -22780854 + (TG)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr2 227908514 227908542 -22779312 + AT_rich Low_complexity Low_complexity 1 28 0 491 193 124 41 chr2 227909412 227909557 -22778297 + MER58A DNA MER1_type 1 157 0 426 121 0 0 chr2 227910021 227910087 -22777767 + (TTCC)n Simple_repeat Simple_repeat 4 69 0 1801 140 41 0 chr2 227910096 227910367 -22777487 - AluSg SINE Alu -7 303 22 326 294 137 59 chr2 227910619 227910976 -22776878 + L1M4 LINE L1 4256 4640 -1506 456 303 15 0 chr2 227913081 227913213 -22774641 - MIR SINE MIR -121 141 8 397 298 85 27 chr2 227913221 227913409 -22774445 + L2 LINE L2 3074 3272 0 381 216 301 0 chr2 227916155 227916308 -22771546 + MER69 DNA AcHobo 1 199 -2327 328 301 221 0 chr2 227916442 227916578 -22771276 + MER5A DNA MER1_type 9 174 -15 190 403 24 57 chr2 227917197 227917321 -22770533 + L2 LINE L2 3134 3253 -19 212 250 273 0 chr2 227917732 227917820 -22770034 + MIR SINE MIR 41 152 -110 1836 230 99 34 chr2 227918168 227918725 -22769129 + MLT1E LTR MaLR 1 593 0 3053 186 152 36 chr2 227918966 227920042 -22767812 - L1MC2 LINE L1 -1 6343 5144 312 315 96 70 chr2 227920704 227920879 -22766975 + L2 LINE L2 2926 3114 -158 1964 126 45 25 chr2 227920879 227921236 -22766618 + THE1B LTR MaLR 1 364 0 312 315 96 70 chr2 227921236 227921374 -22766480 + L2 LINE L2 3114 3247 -25 266 305 24 0 chr2 227922544 227922626 -22765228 - L2 LINE L2 -1 3312 3229 23 0 0 0 chr2 227922735 227922758 -22765096 + AT_rich Low_complexity Low_complexity 1 23 0 6100 127 37 17 chr2 227922758 227923694 -22764160 - L1MA3 LINE L1 0 6305 5323 2009 93 28 0 chr2 227923694 227923984 -22763870 - AluY SINE Alu -13 298 1 6100 127 37 17 chr2 227923984 227924486 -22763368 - L1MA3 LINE L1 -982 5323 4832 761 292 68 53 chr2 227925117 227925868 -22761986 - HAL1 LINE L1 0 2507 1746 279 0 0 0 chr2 227926005 227926036 -22761818 + (TG)n Simple_repeat Simple_repeat 2 32 0 306 205 39 0 chr2 227926042 227926120 -22761734 - L1ME1 LINE L1 -51 6115 6035 1137 234 166 34 chr2 227926879 227927554 -22760300 - HAL1 LINE L1 -758 1749 986 1065 276 90 37 chr2 227927555 227928143 -22759711 - HAL1 LINE L1 -1888 619 1 593 148 190 7 chr2 227928390 227928532 -22759322 - MER20 DNA MER1_type -18 201 34 843 205 42 51 chr2 227928573 227928788 -22759066 - MER58A DNA MER1_type -11 213 1 211 367 11 33 chr2 227929040 227929130 -22758724 + L2 LINE L2 3138 3225 -47 413 246 6 97 chr2 227929655 227929830 -22758024 - MIR3 SINE MIR -25 183 25 1863 228 81 20 chr2 227930508 227930877 -22756977 - L1MD3 LINE L1 0 7995 7579 1529 218 42 20 chr2 227930877 227931231 -22756623 - MLT1A1 LTR MaLR -3 362 1 1863 228 81 20 chr2 227931231 227931419 -22756435 - L1MD3 LINE L1 -416 7579 7404 357 182 15 0 chr2 227931419 227931485 -22756369 - MLT1F1 LTR MaLR -442 125 59 421 36 0 0 chr2 227932055 227932110 -22755744 + MADE1 DNA Mariner 26 80 0 563 269 68 55 chr2 227932225 227932444 -22755410 + MIR SINE MIR 41 262 0 27 73 0 0 chr2 227932652 227932707 -22755147 + AT_rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr2 227934000 227934022 -22753832 + AT_rich Low_complexity Low_complexity 1 22 0 1551 167 45 10 chr2 227934279 227934383 -22753471 + AluJo SINE Alu 15 114 -198 231 61 0 0 chr2 227934383 227934416 -22753438 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 1551 167 45 10 chr2 227934416 227934599 -22753255 + AluJo SINE Alu 114 312 0 25 51 0 0 chr2 227934654 227934693 -22753161 + AT_rich Low_complexity Low_complexity 1 39 0 222 327 37 10 chr2 227935120 227935217 -22752637 - MIR SINE MIR -68 140 34 364 256 205 0 chr2 227935254 227935371 -22752483 + MER5A DNA MER1_type 41 181 -8 2724 25 0 6 chr2 227936239 227936559 -22751295 + AluYb8 SINE Alu 1 318 0 2063 140 6 16 chr2 227936823 227937138 -22750716 - AluSx SINE Alu 0 312 1 423 0 0 0 chr2 227937161 227937208 -22750646 + (TG)n Simple_repeat Simple_repeat 2 48 0 933 113 8 0 chr2 227937217 227937341 -22750513 - AluSq/x SINE Alu -188 125 1 2093 142 7 0 chr2 227937775 227938078 -22749776 - AluSx SINE Alu -7 305 1 279 0 0 0 chr2 227938107 227938138 -22749716 + (TG)n Simple_repeat Simple_repeat 2 32 0 962 120 0 0 chr2 227938147 227938272 -22749582 - AluSq/x SINE Alu -187 125 1 378 42 0 0 chr2 227939804 227939852 -22748002 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 677 281 146 39 chr2 227939857 227940192 -22747662 - L2 LINE L2 -22 3291 2921 377 215 141 62 chr2 227940235 227940466 -22747388 - Charlie5 DNA MER1_type -14 2610 2342 2278 86 3 0 chr2 227940466 227940768 -22747086 - AluY SINE Alu -8 303 1 377 215 141 62 chr2 227940768 227940876 -22746978 - Charlie5 DNA MER1_type -282 2342 2244 2256 118 0 6 chr2 227940894 227941208 -22746646 - AluSx SINE Alu 0 312 1 493 175 17 33 chr2 227941208 227941328 -22746526 - Charlie5 DNA MER1_type -2488 124 7 1387 330 103 10 chr2 227941363 227942073 -22745781 - L2 LINE L2 -477 2837 2062 1725 164 3 13 chr2 227942075 227942373 -22745481 + AluY SINE Alu 1 295 -16 847 131 0 0 chr2 227942413 227942543 -22745311 - MSTB LTR MaLR -296 130 1 1471 256 19 46 chr2 227942841 227943455 -22744399 + L1M4 LINE L1 3565 4162 -1984 31 44 0 0 chr2 227943700 227943745 -22744109 + AT_rich Low_complexity Low_complexity 1 45 0 5759 137 20 25 chr2 227943747 227944815 -22743039 + L1MC1 LINE L1 5254 6315 -18 948 244 30 20 chr2 227944927 227945226 -22742628 + L1ME3A LINE L1 5834 6135 -35 214 289 18 105 chr2 227945416 227945530 -22742324 - MIR SINE MIR -67 141 38 583 313 23 32 chr2 227946185 227946402 -22741452 + MIR SINE MIR 48 262 0 764 293 30 17 chr2 227946485 227946782 -22741072 - LTR16A1 LTR ERVL -23 434 134 322 350 125 29 chr2 227948065 227948448 -22739406 + L2 LINE L2 2320 2739 -575 22 0 0 0 chr2 227948533 227948555 -22739299 + AT_rich Low_complexity Low_complexity 1 22 0 1881 184 41 94 chr2 227948581 227948732 -22739122 - MLT1D LTR MaLR 0 505 348 2088 119 7 0 chr2 227948732 227948841 -22739013 + AluSx SINE Alu 18 125 -187 192 40 0 0 chr2 227948841 227948866 -22738988 + (CAA)n Simple_repeat Simple_repeat 3 27 0 2088 119 7 0 chr2 227948866 227949049 -22738805 + AluSx SINE Alu 125 312 0 1881 184 41 94 chr2 227949049 227949430 -22738424 - MLT1D LTR MaLR -157 348 1 447 302 138 0 chr2 227950667 227950856 -22736998 + MIR SINE MIR 46 260 -2 215 351 27 18 chr2 227950982 227951093 -22736761 + MIR SINE MIR 22 133 -75 27 0 0 0 chr2 227952564 227952591 -22735263 + AT_rich Low_complexity Low_complexity 1 27 0 230 178 0 44 chr2 227952729 227952774 -22735080 + C-rich Low_complexity Low_complexity 1 43 0 191 300 113 12 chr2 227953349 227953429 -22734425 - MIR SINE MIR -125 137 50 293 207 17 0 chr2 227953532 227953590 -22734264 - L2 LINE L2 -1244 2070 2012 2155 137 0 9 chr2 227953646 227953961 -22733893 - AluSx SINE Alu 0 312 1 267 54 0 0 chr2 227954082 227954119 -22733735 + (GA)n Simple_repeat Simple_repeat 1 37 0 669 311 75 14 chr2 227954119 227954412 -22733442 - LTR33 LTR ERVL -210 311 1 201 220 51 0 chr2 227954649 227954708 -22733146 + CT-rich Low_complexity Low_complexity 5 66 0 759 256 0 19 chr2 227955011 227955171 -22732683 - MER5A DNA MER1_type -16 173 17 280 304 50 44 chr2 227955444 227955625 -22732229 + L2 LINE L2 2278 2459 -855 254 274 106 26 chr2 227956370 227956483 -22731371 - MIR SINE MIR -70 192 71 24 0 0 0 chr2 227958623 227958647 -22729207 + AT_rich Low_complexity Low_complexity 1 24 0 478 209 65 20 chr2 227959863 227960016 -22727838 - HAL1 LINE L1 -40 2467 2308 374 268 146 38 chr2 227960016 227960255 -22727599 - L2 LINE L2 -4 3309 3045 2215 145 40 32 chr2 227960327 227960871 -22726983 - MLT2A2 LTR ERVL 0 554 1 1259 279 136 64 chr2 227960879 227961938 -22725916 - L2 LINE L2 -337 2977 1843 416 312 87 59 chr2 227961960 227962364 -22725490 - HAL1 LINE L1 -228 2279 1865 629 247 27 78 chr2 227962965 227963184 -22724670 + MIR SINE MIR 8 215 -47 725 281 30 61 chr2 227963465 227963728 -22724126 + MIR SINE MIR 8 262 0 21 0 0 0 chr2 227963868 227963889 -22723965 + AT_rich Low_complexity Low_complexity 1 21 0 364 253 22 11 chr2 227963900 227963991 -22723863 - MER8 DNA MER2_type -133 106 15 276 167 36 24 chr2 227963994 227964078 -22723776 + (TA)n Simple_repeat Simple_repeat 1 85 0 13815 131 27 21 chr2 227964256 227966660 -22721194 + Tigger1 DNA MER2_type 1 2418 0 261 259 51 32 chr2 227966711 227966869 -22720985 - L1ME3A LINE L1 -243 5927 5767 1899 148 35 59 chr2 227967814 227968186 -22719668 - THE1B LTR MaLR 0 364 2 548 183 0 0 chr2 227968685 227968778 -22719076 + Tigger1 DNA MER2_type 2326 2418 0 261 259 51 32 chr2 227968829 227968987 -22718867 - L1ME3A LINE L1 -243 5927 5767 2154 118 35 62 chr2 227969931 227970305 -22717549 - THE1B LTR MaLR 0 364 1 256 337 100 34 chr2 227970809 227971277 -22716577 - L2 LINE L2 -2 3311 2817 249 230 0 0 chr2 227971543 227971617 -22716237 + GA-rich Low_complexity Low_complexity 1 74 0 227 247 35 71 chr2 227971861 227971946 -22715908 + MIR SINE MIR 51 132 -130 258 164 0 0 chr2 227972617 227972672 -22715182 + (TG)n Simple_repeat Simple_repeat 2 56 0 363 179 26 13 chr2 227973138 227973216 -22714638 + MER58B DNA MER1_type 263 341 0 496 104 0 31 chr2 227973279 227973375 -22714479 + (TCCC)n Simple_repeat Simple_repeat 4 96 0 232 258 305 20 chr2 227974234 227974385 -22713469 + MIR SINE MIR 66 259 -3 448 282 80 31 chr2 227974543 227974706 -22713148 - MIR3 SINE MIR -6 202 32 212 384 27 0 chr2 227979543 227979655 -22708199 - L2 LINE L2 -213 3059 2945 189 0 0 0 chr2 227980241 227980262 -22707592 + (T)n Simple_repeat Simple_repeat 1 21 0 1355 195 53 11 chr2 227981105 227981245 -22706609 - AluJo SINE Alu -38 274 141 270 0 0 0 chr2 227981245 227981275 -22706579 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1355 195 53 11 chr2 227981275 227981396 -22706458 - AluJo SINE Alu -171 141 2 1173 248 85 41 chr2 227981460 227981516 -22706338 - MLT2B1 LTR ERVL 0 554 502 2021 138 11 38 chr2 227981516 227981887 -22705967 + MER46B DNA MER2_type 1 236 0 1173 248 85 41 chr2 227981887 227982314 -22705540 - MLT2B1 LTR ERVL -52 502 1 230 349 56 8 chr2 227982515 227982641 -22705213 - MIR3 SINE MIR -43 165 34 1118 267 137 22 chr2 227982721 227983174 -22704680 + MLT1D LTR MaLR 1 505 0 409 238 49 58 chr2 227983618 227983782 -22704072 + MIR SINE MIR 9 166 -62 3064 196 35 68 chr2 227983904 227983982 -22703872 + L1MC3 LINE L1 6571 6650 -1135 2299 101 0 7 chr2 227983982 227984289 -22703565 - AluSx SINE Alu -7 305 1 3064 196 35 68 chr2 227984289 227985105 -22702749 + L1MC3 LINE L1 6650 7435 -350 13053 79 12 1 chr2 227985410 227987199 -22700655 + HERVL LTR ERVL 952 2760 -2894 349 228 39 39 chr2 227987274 227987401 -22700453 + CT-rich Low_complexity Low_complexity 2 128 0 187 293 40 40 chr2 227987591 227987690 -22700164 + MIR3 SINE MIR 89 187 -21 631 259 35 29 chr2 227988334 227988508 -22699346 - MIR SINE MIR -5 257 83 202 61 0 30 chr2 227989578 227989611 -22698243 + MER91 DNA MER1_type 33 64 -76 2442 45 7 3 chr2 227989817 227990125 -22697729 + AluYa5 SINE Alu 1 309 -2 234 91 0 0 chr2 227990248 227990281 -22697573 + (TA)n Simple_repeat Simple_repeat 2 34 0 2264 75 66 3 chr2 227990285 227990619 -22697235 - MLT2A1 LTR ERVL -89 355 1 2155 179 23 60 chr2 227990773 227991258 -22696596 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr2 227993178 227993200 -22694654 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr2 227993438 227993473 -22694381 + (T)n Simple_repeat Simple_repeat 1 35 0 181 341 44 22 chr2 227994235 227994326 -22693528 + L2 LINE L2 3193 3285 -28 342 260 29 110 chr2 227994799 227995094 -22692760 + L1MC/D LINE L1 5540 5809 -327 399 21 0 0 chr2 227995482 227995530 -22692324 + (CA)n Simple_repeat Simple_repeat 2 49 0 2275 182 58 82 chr2 227995811 227996554 -22691300 + LTR8A LTR ERV1 3 727 0 393 298 90 22 chr2 227996760 227996938 -22690916 - LTR16A1 LTR ERVL 0 457 268 1107 256 68 36 chr2 227997091 227997646 -22690208 - L1MC4 LINE L1 -130 7912 7340 298 78 0 59 chr2 227998200 227998251 -22689603 - MLT2A1 LTR ERVL -8 445 398 250 75 75 0 chr2 227998251 227998318 -22689536 + (TA)n Simple_repeat Simple_repeat 1 72 0 2253 122 30 10 chr2 227998320 227998714 -22689140 - MLT2A1 LTR ERVL -39 405 4 21 36 0 0 chr2 227998855 227998883 -22688971 + AT_rich Low_complexity Low_complexity 1 28 0 477 234 78 0 chr2 227999301 227999442 -22688412 + L2 LINE L2 1979 2130 -1184 267 225 0 62 chr2 227999481 227999561 -22688293 + LTR33 LTR ERVL 23 97 -424 983 181 56 17 chr2 227999578 227999810 -22688044 + MLT1C LTR MaLR 10 250 -217 1913 129 85 113 chr2 227999810 228000281 -22687573 - LTR32 LTR ERVL 0 471 14 343 157 29 0 chr2 228000285 228000355 -22687499 + MLT1C LTR MaLR 251 322 -145 974 140 0 6 chr2 228000425 228000603 -22687251 - L1PA10 LINE L1 -964 5182 5006 5538 101 20 35 chr2 228000603 228000783 -22687071 + L1PA10 LINE L1 5198 5379 -789 2671 67 9 0 chr2 228000783 228001129 -22686725 + L1PA6 LINE L1 5800 6148 -6 5538 101 20 35 chr2 228001129 228001928 -22685926 + L1PA10 LINE L1 5379 6167 -1 262 247 0 43 chr2 228001997 228002090 -22685764 + L2 LINE L2 2146 2234 -1080 462 316 68 5 chr2 228002315 228002505 -22685349 + MIR SINE MIR 25 226 -36 225 77 0 0 chr2 228003753 228003792 -22684062 - L1MC4 LINE L1 -1339 6703 6665 183 139 0 0 chr2 228003801 228003837 -22684017 + (CA)n Simple_repeat Simple_repeat 1 36 0 252 357 38 43 chr2 228003914 228004099 -22683755 - L2 LINE L2 -195 3077 2894 2316 80 7 0 chr2 228004149 228004436 -22683418 - AluY SINE Alu -22 289 1 183 179 0 51 chr2 228004830 228004869 -22682985 + MIR SINE MIR 218 254 -8 23 0 0 0 chr2 228006426 228006449 -22681405 + AT_rich Low_complexity Low_complexity 1 23 0 570 180 31 0 chr2 228007735 228007863 -22679991 + L1MC2 LINE L1 6202 6333 -11 1694 146 49 36 chr2 228007875 228007999 -22679855 + AluJo SINE Alu 1 122 -190 399 21 0 0 chr2 228007999 228008047 -22679807 + (TAA)n Simple_repeat Simple_repeat 2 49 0 1694 146 49 36 chr2 228008047 228008230 -22679624 + AluJo SINE Alu 122 312 0 369 232 91 0 chr2 228009643 228009777 -22678077 - MER45A DNA AcHobo -21 157 1 376 351 79 0 chr2 228010408 228010573 -22677281 - MIR SINE MIR -36 226 49 478 281 66 104 chr2 228010695 228011030 -22676824 + MLT2F LTR ERVL 36 357 -306 659 274 0 0 chr2 228011030 228011185 -22676669 - MER45A DNA AcHobo 0 178 24 367 285 97 18 chr2 228011240 228011405 -22676449 + MLT2F LTR ERVL 418 595 -68 272 207 23 23 chr2 228011398 228011485 -22676369 + MER105 DNA DNA 117 203 -1 * 1343 207 37 7 chr2 228012139 228012439 -22675415 - MER58B DNA MER1_type -3 338 30 200 133 44 0 chr2 228012817 228012862 -22674992 + (TATATG)n Simple_repeat Simple_repeat 1 47 0 22 0 0 0 chr2 228013280 228013302 -22674552 + AT_rich Low_complexity Low_complexity 1 22 0 204 125 0 0 chr2 228014510 228014542 -22673312 + (TCCA)n Simple_repeat Simple_repeat 2 33 0 345 330 19 9 chr2 228014554 228014660 -22673194 - L2 LINE L2 -21 3251 3145 252 266 26 26 chr2 228015175 228015288 -22672566 + MER46C DNA MER2_type 16 128 -210 225 0 0 0 chr2 228015431 228015456 -22672398 + (A)n Simple_repeat Simple_repeat 1 25 0 1625 139 7 90 chr2 228015458 228015807 -22672047 + AluSx SINE Alu 1 323 0 2710 124 34 0 chr2 228016187 228016598 -22671256 + MSTA LTR MaLR 3 427 -1 200 157 20 20 chr2 228016600 228016651 -22671203 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 415 232 71 76 chr2 228016668 228016866 -22670988 + L1ME4a LINE L1 5923 6119 -2 236 381 99 27 chr2 228016937 228017160 -22670694 + MIR SINE MIR 24 262 0 966 174 25 20 chr2 228017320 228017521 -22670333 - MSTB LTR MaLR 0 426 225 1118 256 81 108 chr2 228017625 228017916 -22669938 + L2 LINE L2 2255 2552 -761 2860 195 21 28 chr2 228017916 228018463 -22669391 + L1MB4 LINE L1 5511 6054 -126 2384 88 0 0 chr2 228018463 228018759 -22669095 + AluSx SINE Alu 1 296 -16 2860 195 21 28 chr2 228018759 228018883 -22668971 + L1MB4 LINE L1 6054 6177 -3 1118 256 81 108 chr2 228018883 228019790 -22668064 + L2 LINE L2 2552 3313 0 445 178 20 20 chr2 228019906 228019918 -22667936 - L1PA16 LINE L1 -9 6157 6146 1783 147 0 0 chr2 228019918 228020183 -22667671 - AluSx SINE Alu -15 297 33 445 178 20 20 chr2 228020183 228020271 -22667583 - L1PA16 LINE L1 -19 6147 6057 303 145 0 32 chr2 228020507 228020569 -22667285 - MLT2B1 LTR ERVL 0 554 495 732 47 54 8 chr2 228020569 228020698 -22667156 + (TAGA)n Simple_repeat Simple_repeat 3 137 0 1539 240 41 59 chr2 228020713 228021222 -22666632 - MLT2B1 LTR ERVL -20 500 1 232 212 224 12 chr2 228021764 228021849 -22666005 + MER5A DNA MER1_type 10 112 -77 387 303 116 12 chr2 228021892 228022075 -22665779 + MIR SINE MIR 60 259 -3 228 314 57 32 chr2 228022202 228022326 -22665528 - L2 LINE L2 -13 3300 3174 440 292 121 42 chr2 228022903 228023167 -22664687 - Charlie8 DNA MER1_type -2131 286 2 418 320 6 17 chr2 228023238 228023416 -22664438 - MER5B DNA MER1_type -2 176 1 196 253 84 42 chr2 228024838 228024933 -22662921 + MIR SINE MIR 113 211 -51 618 263 141 37 chr2 228026347 228026644 -22661210 - L2 LINE L2 -34 3279 2952 2334 84 17 3 chr2 228026666 228026965 -22660889 + AluY SINE Alu 1 303 -8 231 352 46 93 chr2 228027176 228027608 -22660246 - L2 LINE L2 -55 3217 2806 626 225 165 16 chr2 228028023 228028205 -22659649 - MER3 DNA MER1_type 0 209 1 353 285 124 43 chr2 228028425 228028611 -22659243 - MIR SINE MIR -14 248 48 189 0 0 0 chr2 228028651 228028672 -22659182 + (TCTA)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr2 228028687 228028708 -22659146 + (TA)n Simple_repeat Simple_repeat 1 21 0 2272 92 3 13 chr2 228028784 228029098 -22658756 + AluSp SINE Alu 1 311 -2 1799 152 76 22 chr2 228029156 228029512 -22658342 - THE1C LTR MaLR 0 375 1 576 289 83 52 chr2 228029784 228030413 -22657441 - L1MC/D LINE L1 -574 5596 5082 2325 97 0 0 chr2 228030413 228030711 -22657143 - AluY SINE Alu -13 298 1 576 289 83 52 chr2 228030711 228031007 -22656847 - L1MC/D LINE L1 -1088 5082 4797 277 311 203 19 chr2 228031600 228031812 -22656042 + MIR SINE MIR 1 251 -11 2147 156 6 0 chr2 228031945 228032291 -22655563 + MER7A DNA MER2_type 1 346 0 391 266 130 31 chr2 228032399 228032591 -22655263 + MIR SINE MIR 47 257 -5 458 291 92 68 chr2 228032610 228032861 -22654993 + MIR SINE MIR 6 262 0 589 315 15 5 chr2 228034062 228034265 -22653589 - MLT1J LTR MaLR -239 272 68 342 361 42 33 chr2 228036577 228036790 -22651064 + L1ME LINE L1 374 588 -5531 378 0 0 0 chr2 228036947 228036989 -22650865 + (CA)n Simple_repeat Simple_repeat 2 43 0 455 271 52 46 chr2 228037091 228037479 -22650375 + L1ME LINE L1 797 1186 -4933 295 263 181 44 chr2 228037605 228037875 -22649979 + L1ME LINE L1 1347 1653 -4657 2253 103 0 7 chr2 228038329 228038629 -22649225 + AluSx SINE Alu 1 298 -14 231 242 15 0 chr2 228038663 228038729 -22649125 + L1ME LINE L1 5765 5831 -331 422 262 51 126 chr2 228038732 228039169 -22648685 + MLT1J LTR MaLR 27 494 -17 207 232 0 0 chr2 228039271 228039327 -22648527 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 252 250 0 0 chr2 228039668 228039735 -22648119 + MIR SINE MIR 72 139 -69 591 245 19 25 chr2 228040153 228040312 -22647542 + MIR SINE MIR 97 254 -8 228 235 10 20 chr2 228040710 228040812 -22647042 + CT-rich Low_complexity Low_complexity 3 103 0 285 222 91 85 chr2 228041308 228041484 -22646370 + MLT1K LTR MaLR 395 571 -17 205 161 0 0 chr2 228043246 228043277 -22644577 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 310 286 152 29 chr2 228043590 228043695 -22644159 - MIR SINE MIR -63 145 26 273 319 6 56 chr2 228044008 228044136 -22643718 - MER117 DNA MER1_type -44 153 33 2200 189 51 16 chr2 228044136 228044587 -22643267 + MLT1C LTR MaLR 1 467 0 273 319 6 56 chr2 228044587 228044618 -22643236 - MER117 DNA MER1_type -164 33 2 203 0 37 0 chr2 228044638 228044665 -22643189 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 202 205 0 0 chr2 228045180 228045219 -22642635 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 607 225 92 0 chr2 228045975 228046095 -22641759 + FRAM SINE Alu 2 132 -44 559 138 64 0 chr2 228046446 228046555 -22641299 - MER53 DNA DNA -73 116 1 1555 206 76 31 chr2 228048590 228049105 -22638749 + L1ME LINE L1 2684 3221 -2908 2086 155 44 37 chr2 228049105 228049661 -22638193 + MLT2A2 LTR ERVL 1 554 0 446 285 61 63 chr2 228049661 228050040 -22637814 + L1ME LINE L1 3217 3594 -2535 268 287 7 33 chr2 228050143 228050293 -22637561 + (TA)n Simple_repeat Simple_repeat 1 146 0 4632 230 62 33 chr2 228050303 228050452 -22637402 + L1ME LINE L1 3779 3922 -2227 2074 115 3 29 chr2 228050452 228050765 -22637089 + AluSx SINE Alu 1 305 -7 4632 230 62 33 chr2 228050765 228052309 -22635545 + L1ME LINE L1 3922 5510 -639 1870 217 10 10 chr2 228052496 228052892 -22634962 + MSTD LTR MaLR 1 396 0 28 29 0 0 chr2 228053041 228053076 -22634778 + AT_rich Low_complexity Low_complexity 1 35 0 239 264 126 0 chr2 228053624 228053711 -22634143 + MIR SINE MIR 163 260 -2 203 125 25 0 chr2 228054506 228054546 -22633308 + (TAG)n Simple_repeat Simple_repeat 1 41 0 307 237 0 11 chr2 228054675 228054693 -22633161 - L1MA10 LINE L1 0 6334 6317 2155 235 112 25 chr2 228054693 228055038 -22632816 - L1ME2 LINE L1 -9 6155 5841 527 272 53 44 chr2 228055038 228055244 -22632610 + MER63A DNA MER1_type 1 208 -2 2155 235 112 25 chr2 228055244 228055751 -22632103 - L1ME2 LINE L1 -323 5841 5238 222 91 55 0 chr2 228055759 228055814 -22632040 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 341 125 111 0 chr2 228055867 228055939 -22631915 - L1MC2 LINE L1 -8 6336 6257 678 298 54 47 chr2 228055990 228056695 -22631159 - L1MDa LINE L1 -4568 1647 938 315 49 0 0 chr2 228056751 228056792 -22631062 + (TG)n Simple_repeat Simple_repeat 2 42 0 1577 193 14 0 chr2 228056802 228057077 -22630777 + MER74A LTR ERVL 50 328 -230 1134 245 30 25 chr2 228057082 228057444 -22630410 - L1ME LINE L1 -369 5793 5433 869 192 28 16 chr2 228057480 228057662 -22630192 + MER74A LTR ERVL 375 558 0 203 311 0 0 chr2 228057665 228057726 -22630128 + (CATA)n Simple_repeat Simple_repeat 4 64 0 330 342 68 30 chr2 228057758 228058258 -22629596 - L1MDa LINE L1 -5532 864 346 1563 189 67 29 chr2 228059376 228059752 -22628102 - MLT1B LTR MaLR 0 390 1 1954 184 41 37 chr2 228060120 228060669 -22627185 - MLT2A2 LTR ERVL 0 554 1 8855 101 58 5 chr2 228060669 228061942 -22625912 - HERVL-A2 LTR ERVL 0 5654 4314 2637 103 3 11 chr2 228061949 228062327 -22625527 - THE1C LTR MaLR 0 375 1 9828 119 30 27 chr2 228062327 228063903 -22623951 - THE1C-int LTR MaLR 0 1580 1 2463 129 3 13 chr2 228063903 228064282 -22623572 - THE1C LTR MaLR 0 375 1 369 289 67 37 chr2 228064837 228064972 -22622882 + MER102a DNA MER1_type 191 329 -1 2251 85 3 0 chr2 228064975 228065257 -22622597 - AluY SINE Alu -28 283 1 818 339 55 7 chr2 228065646 228065953 -22621901 + MER115 DNA AcHobo 90 411 -282 405 326 145 33 chr2 228066023 228066443 -22621411 + L2 LINE L2 2833 3299 -14 580 308 51 26 chr2 228066574 228066847 -22621007 - MLT1I LTR MaLR -60 349 70 21 36 0 0 chr2 228066997 228067025 -22620829 + AT_rich Low_complexity Low_complexity 1 28 0 2283 96 0 3 chr2 228068027 228068319 -22619535 - AluSq SINE Alu -22 291 1 24 91 0 0 chr2 228068827 228068893 -22618961 + AT_rich Low_complexity Low_complexity 1 66 0 794 169 0 8 chr2 228068949 228069094 -22618760 + AluJ SINE Alu 3 133 -169 682 165 0 0 chr2 228069094 228069203 -22618651 + AluJ SINE Alu 187 295 -17 245 221 45 72 chr2 228069204 228069426 -22618428 - L1ME4a LINE L1 -131 5990 5775 1024 164 9 59 chr2 228070144 228070364 -22617490 - MER3 DNA MER1_type 0 209 1 2403 69 3 10 chr2 228070646 228070951 -22616903 - AluY SINE Alu -8 303 1 264 59 0 0 chr2 228072271 228072305 -22615549 + (TG)n Simple_repeat Simple_repeat 1 34 0 422 350 83 33 chr2 228072628 228073083 -22614771 - L1ME4a LINE L1 -358 5804 5327 427 209 35 0 chr2 228073557 228073672 -22614182 - L1ME4a LINE L1 -815 5331 5213 316 364 64 7 chr2 228073672 228073812 -22614042 + MIR3 SINE MIR 46 193 -15 2271 100 6 31 chr2 228075495 228075816 -22612038 + AluSq SINE Alu 1 313 0 343 299 81 40 chr2 228076531 228076852 -22611002 - L1ME4a LINE L1 -1325 4821 4488 235 277 15 0 chr2 228077077 228077142 -22610712 + MIR SINE MIR 188 253 -9 1635 182 105 11 chr2 228077177 228077539 -22610315 - MSTD LTR MaLR 0 396 1 1331 167 10 35 chr2 228077660 228078095 -22609759 + L1M2 LINE L1 5134 5559 -732 274 333 57 6 chr2 228078251 228078428 -22609426 - HAL1 LINE L1 -1595 912 727 1934 149 34 3 chr2 228078720 228079016 -22608838 - AluSg SINE Alu -5 305 1 369 350 87 39 chr2 228079641 228080053 -22607801 - L2 LINE L2 -467 2847 2416 191 88 29 0 chr2 228080403 228080437 -22607417 + (CA)n Simple_repeat Simple_repeat 2 36 0 182 333 49 10 chr2 228081870 228081972 -22605882 - MIR SINE MIR -70 192 87 279 261 34 23 chr2 228082364 228082452 -22605402 + L2 LINE L2 3225 3313 0 518 311 33 0 chr2 228083347 228083498 -22604356 + MIR3 SINE MIR 2 157 -51 370 277 36 51 chr2 228083525 228083662 -22604192 + MER5B DNA MER1_type 15 149 -29 1673 113 11 0 chr2 228083829 228084104 -22603750 + L1MA2 LINE L1 6027 6304 0 213 39 0 0 chr2 228084468 228084494 -22603360 + (TG)n Simple_repeat Simple_repeat 2 27 0 352 298 101 24 chr2 228085860 228086028 -22601826 + MIR SINE MIR 28 208 -54 305 277 112 28 chr2 228086136 228086328 -22601526 + MIR SINE MIR 16 229 -33 240 325 73 8 chr2 228086492 228086615 -22601239 - MIR SINE MIR -50 212 82 226 315 164 18 chr2 228087979 228088144 -22599710 - MIR SINE MIR -25 237 49 235 330 20 10 chr2 228088333 228088433 -22599421 - MIR3 SINE MIR -3 205 105 331 279 10 19 chr2 228088910 228089014 -22598840 + L1MC4 LINE L1 6611 6713 -1329 359 322 42 14 chr2 228089878 228090091 -22597763 + MIR SINE MIR 1 219 -43 4945 64 2 0 chr2 228090416 228091037 -22596817 - L1PA7 LINE L1 -13 6141 5520 201 178 0 0 chr2 228091061 228091106 -22596748 + (TATG)n Simple_repeat Simple_repeat 2 46 0 318 50 0 0 chr2 228091966 228092006 -22595848 + (TG)n Simple_repeat Simple_repeat 1 40 0 425 304 80 44 chr2 228092014 228092299 -22595555 - L2 LINE L2 -154 3159 2846 931 207 92 30 chr2 228092299 228092603 -22595251 + MER33 DNA MER1_type 1 323 -1 425 304 80 44 chr2 228092603 228092664 -22595190 - L2 LINE L2 -467 2846 2789 313 213 29 118 chr2 228092711 228092847 -22595007 + L1MC4 LINE L1 6580 6703 -1339 301 196 0 0 chr2 228092870 228092926 -22594928 - L1MC4 LINE L1 -1339 6703 6648 1401 273 126 18 chr2 228092932 228093489 -22594365 - L2 LINE L2 -576 2738 2122 907 271 40 4 chr2 228094283 228094534 -22593320 + MIR SINE MIR 3 262 0 4938 270 71 19 chr2 228094876 228096859 -22590995 + L1MEc LINE L1 52 2136 -4260 747 255 81 30 chr2 228098479 228098812 -22589042 - MLT1I LTR MaLR 0 409 60 527 322 66 72 chr2 228098850 228098960 -22588894 + L2 LINE L2 2923 3032 -240 1811 145 47 50 chr2 228098960 228099298 -22588556 - MER1B DNA MER1_type 0 337 1 527 322 66 72 chr2 228099298 228099535 -22588319 + L2 LINE L2 3032 3268 -4 488 312 30 2 chr2 228100508 228100718 -22587136 + MLT1J1 LTR MaLR 1 214 -236 445 316 32 19 chr2 228100882 228101040 -22586814 - MIR SINE MIR -94 168 9 37 39 0 0 chr2 228101281 228101332 -22586522 + AT_rich Low_complexity Low_complexity 1 51 0 613 264 72 5 chr2 228102093 228102286 -22585568 + MLT1H1 LTR MaLR 30 235 -320 2475 89 0 19 chr2 228102287 228102657 -22585197 - L1PA10 LINE L1 -283 5885 5523 962 104 0 0 chr2 228102649 228102803 -22585051 + L1PA10 LINE L1 6014 6167 0 * 552 269 43 56 chr2 228102832 228103237 -22584617 + MLT1G3 LTR MaLR 25 410 -132 521 276 115 61 chr2 228103414 228103675 -22584179 + MLT1H1 LTR MaLR 269 548 -6 2232 116 0 7 chr2 228105235 228105545 -22582309 + AluSc SINE Alu 1 308 -1 293 315 34 0 chr2 228105981 228106070 -22581784 + MER5A DNA MER1_type 9 100 -89 184 389 9 9 chr2 228106177 228106290 -22581564 + L3 LINE CR1 207 319 -1258 514 227 39 135 chr2 228106398 228106429 -22581425 + MIR SINE MIR 6 38 -224 2518 78 0 0 chr2 228106429 228106736 -22581118 + AluSq SINE Alu 1 307 -6 514 227 39 135 chr2 228106736 228106933 -22580921 + MIR SINE MIR 38 212 -50 1114 179 22 5 chr2 228106949 228107173 -22580681 + L1MD3 LINE L1 7748 7975 -20 193 337 23 23 chr2 228107391 228107477 -22580377 + L3 LINE CR1 648 733 -844 764 302 148 33 chr2 228108122 228108686 -22579168 + Charlie7 DNA MER1_type 5 650 -1962 887 194 45 59 chr2 228108686 228108908 -22578946 + MER20 DNA MER1_type 1 219 0 764 302 148 33 chr2 228108908 228108972 -22578882 + Charlie7 DNA MER1_type 650 705 -1907 559 313 62 8 chr2 228109120 228109379 -22578475 + L3 LINE CR1 1146 1418 -159 4435 162 50 1 chr2 228109630 228110453 -22577401 - L1PA16 LINE L1 -1 6165 5303 3964 173 20 0 chr2 228110420 228111233 -22576621 - L1 LINE L1 -1249 4897 4069 * 847 263 49 16 chr2 228111423 228111666 -22576188 + MIR SINE MIR 12 262 0 23 33 0 0 chr2 228112747 228112777 -22575077 + AT_rich Low_complexity Low_complexity 1 30 0 213 316 112 51 chr2 228113777 228113875 -22573979 + L2 LINE L2 3121 3224 -48 28 29 0 0 chr2 228114251 228114286 -22573568 + AT_rich Low_complexity Low_complexity 1 35 0 809 217 0 0 chr2 228114289 228114441 -22573413 - FRAM SINE Alu -24 152 1 618 277 164 26 chr2 228114838 228115185 -22572669 + L2 LINE L2 2821 3215 -98 242 362 58 0 chr2 228115181 228115250 -22572604 - L2 LINE L2 -45 3227 3155 * 2670 10 0 0 chr2 228115484 228115777 -22572077 + AluYa5 SINE Alu 1 293 -18 360 158 0 0 chr2 228115944 228116001 -22571853 - MIR3 SINE MIR -14 194 138 210 143 0 0 chr2 228116723 228116758 -22571096 + (T)n Simple_repeat Simple_repeat 1 35 0 1849 157 9 38 chr2 228116760 228117078 -22570776 - AluSx SINE Alu -3 309 1 25 51 0 0 chr2 228117172 228117211 -22570643 + AT_rich Low_complexity Low_complexity 1 39 0 2340 103 0 7 chr2 228117830 228118140 -22569714 - AluSq SINE Alu -5 308 1 435 354 49 68 chr2 228118392 228118819 -22569035 - L2 LINE L2 -2 3270 2852 194 206 0 0 chr2 228120437 228120471 -22567383 - L2 LINE L2 -15 3298 3265 258 194 0 0 chr2 228120672 228120734 -22567120 + (CA)n Simple_repeat Simple_repeat 2 63 0 22 0 0 0 chr2 228120953 228120975 -22566879 + AT_rich Low_complexity Low_complexity 1 22 0 644 285 55 72 chr2 228122058 228122458 -22565396 - MLT1I LTR MaLR -8 401 9 1645 168 19 0 chr2 228122824 228123086 -22564768 - AluJb SINE Alu -18 294 28 35 24 0 0 chr2 228123211 228123253 -22564601 + AT_rich Low_complexity Low_complexity 1 42 0 288 292 130 41 chr2 228123803 228124242 -22563612 + HAL1 LINE L1 806 1283 -1224 181 350 0 0 chr2 228124292 228124352 -22563502 + MIR SINE MIR 56 115 -147 22 35 0 0 chr2 228124434 228124463 -22563391 + AT_rich Low_complexity Low_complexity 1 29 0 232 266 139 70 chr2 228124968 228125126 -22562728 - MIR3 SINE MIR -7 201 33 392 343 104 44 chr2 228126102 228126692 -22561162 + L2 LINE L2 2322 2951 -321 465 304 110 0 chr2 228126774 228126965 -22560889 + MIR SINE MIR 50 261 -1 185 235 29 44 chr2 228127809 228127877 -22559977 + MIR3 SINE MIR 136 202 -6 261 57 0 0 chr2 228127915 228127950 -22559904 + (A)n Simple_repeat Simple_repeat 1 35 0 335 262 47 19 chr2 228128322 228128429 -22559425 - L2 LINE L2 0 3313 3204 470 250 34 14 chr2 228129064 228129212 -22558642 - LTR41 LTR ERVL -615 158 8 254 192 10 154 chr2 228129703 228129807 -22558047 + MIR SINE MIR 156 244 -18 279 350 146 5 chr2 228129954 228130160 -22557694 - MIR SINE MIR -13 249 15 388 310 13 38 chr2 228131144 228131302 -22556552 - MIR SINE MIR -95 167 14 329 318 39 23 chr2 228132422 228132551 -22555303 - L2 LINE L2 -4 3309 3179 1733 160 36 0 chr2 228133134 228133415 -22554439 + AluSx SINE Alu 9 299 -13 343 192 10 10 chr2 228133417 228133516 -22554338 + (TA)n Simple_repeat Simple_repeat 2 100 0 183 156 0 0 chr2 228134714 228134746 -22553108 + CT-rich Low_complexity Low_complexity 6 37 0 246 226 28 0 chr2 228135134 228135240 -22552614 + GA-rich Low_complexity Low_complexity 1 109 0 331 182 133 138 chr2 228137077 228137280 -22550574 - L1MC4 LINE L1 -5 8037 7836 3845 165 84 3 chr2 228138154 228138918 -22548936 - LTR1B LTR ERV1 0 826 1 311 300 9 18 chr2 228139558 228139668 -22548186 + GA-rich Low_complexity Low_complexity 2 110 0 21 0 0 0 chr2 228140866 228140887 -22546967 + AT_rich Low_complexity Low_complexity 1 21 0 2361 112 0 0 chr2 228142288 228142592 -22545262 - AluSq SINE Alu -9 304 1 190 296 0 19 chr2 228142889 228142943 -22544911 - L2 LINE L2 -201 3071 3019 189 0 0 0 chr2 228143133 228143154 -22544700 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 546 16 0 0 chr2 228144157 228144220 -22543634 + (GGAA)n Simple_repeat Simple_repeat 1 63 0 701 237 71 12 chr2 228144634 228144837 -22543017 - L1ME3 LINE L1 0 6162 5972 2435 70 0 3 chr2 228144837 228145139 -22542715 - AluY SINE Alu -10 301 1 701 237 71 12 chr2 228145139 228145336 -22542518 - L1ME3 LINE L1 -190 5972 5703 278 271 73 0 chr2 228145415 228145511 -22542343 + MIR SINE MIR 47 149 -113 370 362 35 78 chr2 228147300 228147471 -22540383 + L2 LINE L2 2897 3047 -225 2127 119 0 3 chr2 228147471 228147764 -22540090 + AluSx SINE Alu 1 292 -20 370 362 35 78 chr2 228147764 228147940 -22539914 + L2 LINE L2 3047 3229 -43 454 355 105 43 chr2 228149707 228150536 -22537318 + L2 LINE L2 1901 2780 -534 202 139 23 0 chr2 228150549 228150592 -22537262 + (CAA)n Simple_repeat Simple_repeat 1 44 0 345 309 40 104 chr2 228151125 228151374 -22536480 + MIR SINE MIR 30 262 0 1564 104 9 18 chr2 228152278 228152498 -22535356 - AluSc SINE Alu -6 303 86 1180 190 104 26 chr2 228152780 228153049 -22534805 + AluJb SINE Alu 1 290 -12 202 368 118 0 chr2 228153112 228153248 -22534606 - MIR SINE MIR -62 200 49 410 196 11 0 chr2 228154198 228154290 -22533564 + (TA)n Simple_repeat Simple_repeat 1 93 0 278 330 19 0 chr2 228155940 228156043 -22531811 - L2 LINE L2 -215 3057 2953 212 359 199 7 chr2 228156385 228156792 -22531062 - L2 LINE L2 -555 2759 2275 2424 139 29 2 chr2 228156798 228157209 -22530645 - MSTA LTR MaLR -6 422 1 253 262 33 0 chr2 228157526 228157587 -22530267 + GA-rich Low_complexity Low_complexity 2 64 0 300 344 49 11 chr2 228157812 228157995 -22529859 - L2 LINE L2 -559 2755 2566 206 304 89 0 chr2 228158258 228158337 -22529517 - MER91C DNA MER1_type -30 110 25 1125 129 4 120 chr2 228158435 228158676 -22529178 + MER20 DNA MER1_type 3 215 -4 21 36 0 0 chr2 228159922 228159950 -22527904 + AT_rich Low_complexity Low_complexity 1 28 0 2562 67 0 6 chr2 228160630 228160943 -22526911 - AluY SINE Alu 0 311 1 592 252 101 32 chr2 228160978 228161196 -22526658 - MIR SINE MIR -5 257 25 730 311 32 16 chr2 228161284 228161535 -22526319 - MIR SINE MIR -6 256 2 26 0 0 0 chr2 228161987 228162013 -22525841 + AT_rich Low_complexity Low_complexity 1 26 0 1933 154 0 3 chr2 228162607 228162899 -22524955 + AluSx SINE Alu 1 291 -21 1532 271 95 29 chr2 228162899 228163728 -22524126 - HAL1 LINE L1 -47 2460 1577 552 246 93 92 chr2 228163729 228164109 -22523745 + MLT1G1 LTR MaLR 1 342 -200 381 278 143 0 chr2 228164120 228164253 -22523601 + MLT1G1 LTR MaLR 443 594 -1 865 242 83 158 chr2 228164267 228165297 -22522557 - HAL1 LINE L1 -941 1566 693 408 40 0 0 chr2 228165297 228165347 -22522507 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 865 242 83 158 chr2 228165347 228165896 -22521958 - HAL1 LINE L1 -1814 693 105 800 239 101 25 chr2 228166252 228166528 -22521326 - MLT1H LTR MaLR -251 298 2 1730 219 87 21 chr2 228166565 228166853 -22521001 + MLT1D LTR MaLR 1 334 -171 2203 151 31 14 chr2 228166853 228167211 -22520643 + THE1B LTR MaLR 1 364 0 1730 219 87 21 chr2 228167211 228167396 -22520458 + MLT1D LTR MaLR 334 505 0 258 125 21 0 chr2 228167611 228167659 -22520195 + MER103 DNA DNA 113 161 -5 253 303 138 55 chr2 228167703 228167957 -22519897 - L2 LINE L2 -16 3297 3023 2235 122 7 0 chr2 228168403 228168699 -22519155 + AluSg SINE Alu 1 298 -12 378 367 53 0 chr2 228169038 228169188 -22518666 - MIR3 SINE MIR -21 187 30 328 244 53 23 chr2 228170057 228170188 -22517666 - MER117 DNA MER1_type -18 179 45 2282 111 0 0 chr2 228170332 228170630 -22517224 - AluSx SINE Alu -14 298 1 1693 149 187 16 chr2 228170766 228171129 -22516725 - MSTA LTR MaLR -3 425 1 9131 122 34 33 chr2 228171129 228172707 -22515147 - THE1C-int LTR MaLR 0 1580 1 1756 149 63 30 chr2 228172707 228173070 -22514784 - THE1C LTR MaLR 0 375 1 840 267 157 36 chr2 228174238 228174601 -22513253 + MLT1I LTR MaLR 1 407 -2 224 273 65 26 chr2 228175092 228175169 -22512685 + MIR SINE MIR 68 147 -115 329 376 0 14 chr2 228175281 228175422 -22512432 + MER63A DNA MER1_type 65 203 -7 466 120 0 13 chr2 228175437 228175512 -22512342 + MADE1 DNA Mariner 4 77 -3 480 181 93 116 chr2 228177106 228177394 -22510460 + L1MC/D LINE L1 1399 1645 -4895 9903 170 27 17 chr2 228177407 228180348 -22507506 - L1PB1 LINE L1 -1 6150 3178 4388 252 47 33 chr2 228180490 228180846 -22507008 + L1MC/D LINE L1 2341 2691 -3849 222 37 0 0 chr2 228180846 228180873 -22506981 + (CA)n Simple_repeat Simple_repeat 2 28 0 4388 252 47 33 chr2 228180873 228182541 -22505313 + L1MC/D LINE L1 2691 4399 -2141 913 270 123 5 chr2 228182536 228182918 -22504936 + L1MC/D LINE L1 4660 5086 -1454 * 350 343 95 2 chr2 228182980 228183263 -22504591 + L1MC/D LINE L1 5699 6010 -818 2136 109 3 3 chr2 228183438 228183731 -22504123 + AluSc SINE Alu 1 293 -16 23 0 0 0 chr2 228184581 228184604 -22503250 + AT_rich Low_complexity Low_complexity 1 23 0 254 213 26 110 chr2 228184643 228184798 -22503056 + HAL1 LINE L1 2024 2165 -342 36 62 0 0 chr2 228184798 228184862 -22502992 + AT_rich Low_complexity Low_complexity 1 64 0 227 259 17 60 chr2 228185184 228185300 -22502554 + HAL1 LINE L1 2321 2431 -76 2171 70 3 7 chr2 228185300 228185584 -22502270 + AluY SINE Alu 1 283 -28 25 95 0 0 chr2 228185924 228185998 -22501856 + AT_rich Low_complexity Low_complexity 1 74 0 240 210 0 16 chr2 228187302 228187364 -22500490 + CT-rich Low_complexity Low_complexity 2 62 0 26 0 0 0 chr2 228187762 228187788 -22500066 + AT_rich Low_complexity Low_complexity 1 26 0 1925 97 3 63 chr2 228187790 228188090 -22499764 - AluSx SINE Alu -30 282 1 213 39 0 0 chr2 228188292 228188318 -22499536 + (GA)n Simple_repeat Simple_repeat 1 26 0 422 239 8 8 chr2 228188726 228188843 -22499011 + L1ME3A LINE L1 6034 6150 -20 1846 235 32 58 chr2 228239763 228240124 -22447730 - L1M4 LINE L1 -1718 4428 4059 2223 98 25 0 chr2 228240124 228240410 -22447444 - AluY SINE Alu -18 293 1 1846 235 32 58 chr2 228240410 228241119 -22446735 - L1M4 LINE L1 -2087 4059 3442 1978 107 54 0 chr2 228242872 228243152 -22444702 + AluSx SINE Alu 1 295 -17 23 54 0 0 chr2 228243395 228243432 -22444422 + AT_rich Low_complexity Low_complexity 1 37 0 2467 78 0 3 chr2 228244431 228244739 -22443115 - AluSx SINE Alu -5 307 1 2727 29 0 3 chr2 228245717 228246026 -22441828 + AluY SINE Alu 1 308 -3 2330 58 0 0 chr2 228246341 228246618 -22441236 - AluY SINE Alu -12 299 23 312 27 0 0 chr2 228246685 228246722 -22441132 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr2 228246832 228246853 -22441001 + AT_rich Low_complexity Low_complexity 1 21 0 2443 85 0 3 chr2 228247528 228247835 -22440019 + AluSx SINE Alu 1 306 -6 1525 280 81 33 chr2 228249346 228249929 -22437925 - MER21B LTR ERV1 -206 657 47 335 243 14 0 chr2 228249945 228250019 -22437835 - MER21B LTR ERV1 -774 89 15 260 244 23 0 chr2 228250048 228250134 -22437720 + L1ME2 LINE L1 6069 6156 -8 227 344 10 21 chr2 228250170 228250266 -22437588 + L2 LINE L2 3214 3308 -5 206 311 33 0 chr2 228251109 228251170 -22436684 - MIR SINE MIR -121 141 79 297 0 0 0 chr2 228251794 228251827 -22436027 + (CA)n Simple_repeat Simple_repeat 2 34 0 554 277 98 0 chr2 228252090 228252274 -22435580 + MLT1I LTR MaLR 1 202 -207 553 89 0 0 chr2 228252759 228252838 -22435016 + MADE1 DNA Mariner 2 80 0 752 114 9 0 chr2 228253127 228253232 -22434622 + AluSc SINE Alu 44 149 -160 706 283 117 43 chr2 228253385 228254075 -22433779 - L1ME LINE L1 -5310 760 20 226 423 27 0 chr2 228254486 228254635 -22433219 - MIR3 SINE MIR -10 198 46 483 269 11 75 chr2 228254831 228255017 -22432837 - MIR SINE MIR -71 191 18 474 298 135 14 chr2 228255225 228255433 -22432421 - MIR SINE MIR -15 247 15 189 0 0 0 chr2 228256702 228256723 -22431131 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 207 0 0 0 chr2 228257847 228257870 -22429984 + (T)n Simple_repeat Simple_repeat 1 23 0 1977 218 95 8 chr2 228258157 228258652 -22429202 + MLT1F LTR MaLR 1 538 -4 387 320 31 23 chr2 228258705 228258833 -22429021 - L2 LINE L2 -221 3051 2923 243 263 240 23 chr2 228259266 228259566 -22428288 + L1MD2 LINE L1 3628 3992 -2154 185 73 0 73 chr2 228259892 228259933 -22427921 + (TTAAA)n Simple_repeat Simple_repeat 5 42 0 1060 243 19 0 chr2 228260542 228260809 -22427045 + L1MD2 LINE L1 5570 5841 -518 932 206 169 8 chr2 228260825 228261092 -22426762 - MLT1D LTR MaLR 0 505 196 776 250 21 5 chr2 228261092 228261284 -22426570 - AluY SINE Alu -11 300 106 1230 123 6 0 chr2 228261386 228261556 -22426298 - AluY SINE Alu -140 171 1 587 263 43 32 chr2 228261559 228261745 -22426109 - MLT1D LTR MaLR -317 188 1 258 236 14 0 chr2 228261747 228261819 -22426035 + L1MD2 LINE L1 5858 5930 -429 3630 123 89 7 chr2 228263540 228264125 -22423729 - MER41B LTR ERV1 -2 633 1 262 370 58 29 chr2 228264338 228264511 -22423343 - MIR SINE MIR -75 187 10 1564 142 0 12 chr2 228266160 228266400 -22421454 - AluSx SINE Alu -75 237 1 276 291 0 0 chr2 228266418 228266497 -22421357 - MER117 DNA MER1_type -81 116 38 267 286 57 29 chr2 228266544 228266649 -22421205 + MIR SINE MIR 30 137 -125 2225 152 59 17 chr2 228267214 228267406 -22420448 + MSTA LTR MaLR 3 186 -242 2189 94 0 7 chr2 228267406 228267703 -22420151 + AluY SINE Alu 1 295 -16 2225 152 59 17 chr2 228267703 228267919 -22419935 + MSTA LTR MaLR 186 428 0 360 0 0 0 chr2 228269131 228269171 -22418683 + (TG)n Simple_repeat Simple_repeat 2 41 0 2266 100 3 0 chr2 228269361 228269662 -22418192 + AluSx SINE Alu 1 302 -10 333 0 0 0 chr2 228269715 228269752 -22418102 + (CA)n Simple_repeat Simple_repeat 1 37 0 226 300 108 39 chr2 228270586 228270716 -22417138 - MER5A DNA MER1_type -44 145 7 715 329 12 8 chr2 228271294 228271543 -22416311 - MIR SINE MIR -3 259 10 218 205 0 0 chr2 228272665 228272704 -22415150 + (TATATG)n Simple_repeat Simple_repeat 5 43 0 1342 196 23 103 chr2 228273932 228274329 -22413525 - MLT1A1 LTR MaLR 0 365 1 190 329 143 38 chr2 228275050 228275287 -22412567 + MIR SINE MIR 1 262 0 1691 126 59 35 chr2 228275366 228275707 -22412147 - THE1C LTR MaLR -26 349 1 2064 125 50 36 chr2 228275864 228276223 -22411631 - THE1B LTR MaLR 0 364 1 302 211 0 0 chr2 228276325 228276382 -22411472 + L1MC4 LINE L1 6647 6703 -1339 236 241 38 13 chr2 228276462 228276541 -22411313 + GA-rich Low_complexity Low_complexity 1 81 0 2320 104 0 0 chr2 228277233 228277542 -22410312 + AluY SINE Alu 1 309 -2 273 119 0 0 chr2 228277543 228277585 -22410269 + (TA)n Simple_repeat Simple_repeat 1 42 0 305 304 33 0 chr2 228277938 228278030 -22409824 + L2 LINE L2 3153 3247 -25 1832 93 25 96 chr2 228279809 228280132 -22407722 + AluSq SINE Alu 1 300 -13 357 316 86 38 chr2 228280147 228280460 -22407394 - L1ME3 LINE L1 -270 5892 5565 579 347 68 36 chr2 228280810 228281080 -22406774 - L1ME3 LINE L1 -941 5205 4945 1843 132 0 0 chr2 228281080 228281352 -22406502 + AluSg SINE Alu 39 310 0 579 347 68 36 chr2 228281352 228281880 -22405974 - L1ME3 LINE L1 -1201 4945 4382 457 302 92 27 chr2 228282025 228282502 -22405352 - L1ME3 LINE L1 -1983 4163 3656 213 121 0 0 chr2 228285242 228285275 -22402579 + (TG)n Simple_repeat Simple_repeat 2 34 0 1200 171 71 42 chr2 228285451 228285690 -22402164 - MLT1A1 LTR MaLR -5 360 115 394 260 96 0 chr2 228285697 228285801 -22402053 + MER81 DNA DNA 1 114 0 516 234 50 92 chr2 228285831 228286049 -22401805 - MER63A DNA MER1_type -1 209 1 246 317 19 29 chr2 228286049 228286153 -22401701 + MIR SINE MIR 158 260 -2 535 301 164 19 chr2 228287950 228288316 -22399538 - L2 LINE L2 -1 3312 2894 * 602 274 18 18 chr2 228288312 228288480 -22399374 - MER5B DNA MER1_type -10 168 1 814 217 50 0 chr2 228288490 228288670 -22399184 - MER5A DNA MER1_type 0 189 1 229 281 133 22 chr2 228289184 228289319 -22398535 - MER102b DNA MER1_type -3 338 189 1358 153 63 15 chr2 228289739 228290057 -22397797 - L1P LINE L1 -783 5363 5047 4847 118 16 3 chr2 228290059 228290802 -22397052 + L1PA16 LINE L1 5405 6157 -9 316 360 153 10 chr2 228290823 228291229 -22396625 + L3 LINE CR1 1113 1576 -1 301 293 23 8 chr2 228291503 228291636 -22396218 - MIR SINE MIR -10 252 118 1376 95 56 223 chr2 228292978 228293017 -22394837 - MER54B LTR ERVL -2 791 747 1057 29 29 0 chr2 228293017 228293156 -22394698 + (TTTC)n Simple_repeat Simple_repeat 2 144 0 1718 101 55 0 chr2 228293157 228293394 -22394460 - AluSg SINE Alu -32 278 29 1376 95 56 223 chr2 228293394 228293761 -22394093 - MER54B LTR ERVL -45 748 451 1377 143 102 0 chr2 228293769 228294014 -22393840 - MER54B LTR ERVL -523 270 1 786 283 45 33 chr2 228294099 228294431 -22393423 - MER102b DNA MER1_type -5 336 1 304 350 43 26 chr2 228294439 228294556 -22393298 + L2 LINE L2 3195 3313 0 255 286 78 65 chr2 228294903 228295120 -22392734 + HAL1 LINE L1 4 223 -2284 282 182 36 0 chr2 228295143 228295198 -22392656 + HAL1 LINE L1 2445 2501 -6 2175 110 10 0 chr2 228295461 228295753 -22392101 + AluSc SINE Alu 1 295 -14 311 210 0 99 chr2 228296374 228296455 -22391399 + L1MD2 LINE L1 6058 6130 -229 1301 181 20 4 chr2 228296557 228296806 -22391048 + L1MD2 LINE L1 6091 6343 -16 416 293 65 52 chr2 228297230 228297653 -22390201 + MLT1H LTR MaLR 51 539 -10 643 275 115 0 chr2 228298020 228298220 -22389634 - MER58A DNA MER1_type 0 224 2 313 346 26 0 chr2 228298299 228298452 -22389402 - MER117 DNA MER1_type -5 192 36 1554 162 75 39 chr2 228299888 228300246 -22387608 - THE1C LTR MaLR -4 371 1 1750 118 0 4 chr2 228300551 228300788 -22387066 + AluSc SINE Alu 56 291 -18 1558 93 5 0 chr2 228301875 228302080 -22385774 - AluSc SINE Alu -103 206 1 392 162 61 155 chr2 228302081 228302229 -22385625 + MER21B LTR ERV1 650 857 -74 1637 234 66 43 chr2 228302257 228302773 -22385081 - L1ME2 LINE L1 -93 6071 5539 1798 175 0 0 chr2 228302773 228303058 -22384796 - AluJb SINE Alu -11 301 17 1637 234 66 43 chr2 228303058 228303118 -22384736 - L1ME2 LINE L1 -625 5539 5482 * 1975 244 78 35 chr2 228303110 228303973 -22383881 - L1P LINE L1 -751 5410 4519 393 325 21 48 chr2 228304216 228304505 -22383349 - L1MEc LINE L1 -6090 306 26 228 35 0 0 chr2 228304567 228304596 -22383258 + (TG)n Simple_repeat Simple_repeat 2 30 0 2620 156 127 115 chr2 228306071 228306512 -22381342 - L1MC3 LINE L1 0 7785 7351 1836 172 0 14 chr2 228306512 228306809 -22381045 + AluSq SINE Alu 1 293 -20 2620 156 127 115 chr2 228306809 228306995 -22380859 - L1MC3 LINE L1 -434 7351 7169 252 197 0 84 chr2 228306995 228307066 -22380788 - MLT1F1 LTR MaLR -478 89 25 2620 156 127 115 chr2 228307066 228307263 -22380591 - L1MC3 LINE L1 -616 7169 6879 303 339 18 0 chr2 228307827 228307939 -22379915 + MIR3 SINE MIR 88 201 -7 188 173 73 24 chr2 228308012 228308076 -22379778 - MIR SINE MIR -114 94 29 898 67 0 8 chr2 228308078 228308198 -22379656 + Alu SINE Alu 180 298 -12 2453 42 0 3 chr2 228308206 228308545 -22379309 + AluY SINE Alu 1 338 0 592 156 9 37 chr2 228308597 228308816 -22379038 + CT-rich Low_complexity Low_complexity 1 213 0 502 139 35 17 chr2 228308930 228309045 -22378809 + CT-rich Low_complexity Low_complexity 4 120 0 575 276 112 90 chr2 228310747 228311291 -22376563 - L1ME4a LINE L1 -225 5896 5341 40 59 0 0 chr2 228311369 228311437 -22376417 + AT_rich Low_complexity Low_complexity 1 68 0 298 247 40 13 chr2 228311715 228311865 -22375989 + (TA)n Simple_repeat Simple_repeat 1 154 0 248 248 121 28 chr2 228311910 228312051 -22375803 - L1ME4a LINE L1 -1303 4843 4690 26 30 0 0 chr2 228312071 228312104 -22375750 + AT_rich Low_complexity Low_complexity 1 33 0 1497 220 52 6 chr2 228312119 228312464 -22375390 + MLT1A1 LTR MaLR 1 361 -4 13665 86 30 2 chr2 228313085 228315732 -22372122 + L1PA7 LINE L1 3466 6143 -11 446 352 0 6 chr2 228315829 228315991 -22371863 + MER117 DNA MER1_type 5 165 -32 1199 181 22 4 chr2 228316232 228316464 -22371390 - L1MC1 LINE L1 -5 6328 6093 2027 120 0 7 chr2 228316625 228316953 -22370901 + AluSg SINE Alu 1 326 0 37 39 0 0 chr2 228318610 228318661 -22369193 + AT_rich Low_complexity Low_complexity 1 51 0 188 197 0 16 chr2 228318771 228318832 -22369022 + (TA)n Simple_repeat Simple_repeat 2 61 0 225 65 0 0 chr2 228320709 228320740 -22367114 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 331 333 89 35 chr2 228321386 228321611 -22366243 + MIR SINE MIR 16 250 -12 2109 110 0 0 chr2 228321952 228322257 -22365597 + AluY SINE Alu 1 305 0 230 276 0 0 chr2 228322295 228322353 -22365501 + (TA)n Simple_repeat Simple_repeat 1 58 0 468 340 53 15 chr2 228322534 228322799 -22365055 + L2 LINE L2 1783 2057 -1257 186 306 35 24 chr2 228323486 228323571 -22364283 + L2 LINE L2 2559 2644 -670 204 67 0 0 chr2 228323749 228323779 -22364075 + (CTTG)n Simple_repeat Simple_repeat 3 32 0 1718 161 0 29 chr2 228323779 228324053 -22363801 - AluSx SINE Alu -46 266 1 22 0 0 0 chr2 228325279 228325301 -22362553 + AT_rich Low_complexity Low_complexity 1 22 0 363 88 78 39 chr2 228325951 228326053 -22361801 + GA-rich Low_complexity Low_complexity 5 110 0 192 268 0 0 chr2 228327087 228327128 -22360726 + L2 LINE L2 3264 3304 -9 2100 109 63 20 chr2 228328758 228329105 -22358749 - THE1B LTR MaLR -2 362 1 400 339 66 28 chr2 228330021 228330340 -22357514 - L2 LINE L2 -853 2461 2131 359 354 62 0 chr2 228330711 228330889 -22356965 - MIR SINE MIR -72 190 2 1670 233 39 31 chr2 228330993 228331535 -22356319 - L1ME1 LINE L1 -18 6148 5603 2399 92 3 0 chr2 228331645 228331940 -22355914 + AluSg SINE Alu 1 296 -14 21 0 0 0 chr2 228334749 228334770 -22353084 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr2 228334970 228335006 -22352848 + AT_rich Low_complexity Low_complexity 1 36 0 843 160 27 37 chr2 228337848 228338035 -22349819 + MER20 DNA MER1_type 31 215 -4 312 314 9 9 chr2 228338741 228338846 -22349008 - L1MC4 LINE L1 -1329 6713 6609 2577 111 26 55 chr2 228339237 228339367 -22348487 - MER65A LTR ERV1 0 445 313 2284 116 3 6 chr2 228339367 228339678 -22348176 + AluSx SINE Alu 2 311 -1 2577 111 26 55 chr2 228339678 228340005 -22347849 - MER65A LTR ERV1 -132 313 1 1655 185 78 33 chr2 228340149 228340685 -22347169 + MLT2A2 LTR ERVL 1 554 0 1768 196 22 6 chr2 228340723 228341081 -22346773 + MLT2D LTR ERVL 3 366 -48 1628 151 14 0 chr2 228341142 228341421 -22346433 + Tigger5 DNA MER2_type 2041 2323 0 408 40 0 0 chr2 228341424 228341474 -22346380 + (CA)n Simple_repeat Simple_repeat 2 51 0 570 289 103 39 chr2 228341703 228342309 -22345545 + L1ME3 LINE L1 2350 3039 -3107 2201 105 7 0 chr2 228342309 228342604 -22345250 + AluSc SINE Alu 1 297 -12 570 289 103 39 chr2 228342604 228342933 -22344921 + L1ME3 LINE L1 3039 3345 -2801 1566 261 91 48 chr2 228343157 228344436 -22343418 + L1ME3 LINE L1 4442 5815 -347 1963 150 10 3 chr2 228344436 228344742 -22343112 + AluJo SINE Alu 1 308 -4 1566 261 91 48 chr2 228344742 228345095 -22342759 + L1ME3 LINE L1 5815 6151 -11 1159 77 0 0 chr2 228345099 228345255 -22342599 + L1PA8 LINE L1 6017 6172 0 189 132 0 0 chr2 228345269 228345307 -22342547 + (CAAAAA)n Simple_repeat Simple_repeat 2 39 0 536 308 93 9 chr2 228345315 228345529 -22342325 + MIR SINE MIR 29 260 -2 709 209 90 0 chr2 228346129 228346263 -22341591 + FRAM SINE Alu 1 146 -30 1997 148 0 0 chr2 228346618 228346915 -22340939 + AluSx SINE Alu 1 297 -15 473 47 16 0 chr2 228346932 228346996 -22340858 + (GAA)n Simple_repeat Simple_repeat 2 66 0 1541 225 117 29 chr2 228347051 228347539 -22340315 + MER21B LTR ERV1 333 863 0 1423 147 22 0 chr2 228348130 228348362 -22339492 + MER75 DNA T2_type 14 250 -264 843 128 0 8 chr2 228348365 228348482 -22339372 + FLAM_C SINE Alu 5 120 -23 1696 105 3 57 chr2 228348508 228348717 -22339137 + MER75 DNA T2_type 235 454 -60 2476 118 13 5 chr2 228348717 228349089 -22338765 - THE1C LTR MaLR 0 375 1 1696 105 3 57 chr2 228349089 228349144 -22338710 + MER75 DNA T2_type 454 484 -30 1667 114 0 9 chr2 228349144 228349371 -22338483 - AluSg/x SINE Alu -17 295 71 1696 105 3 57 chr2 228349371 228349401 -22338453 + MER75 DNA T2_type 484 514 0 334 237 65 0 chr2 228349682 228349775 -22338079 - LTR67 LTR ERVL -21 536 438 203 255 0 0 chr2 228350222 228350273 -22337581 + (CATA)n Simple_repeat Simple_repeat 2 52 0 435 38 0 0 chr2 228350911 228350964 -22336890 + (TA)n Simple_repeat Simple_repeat 2 54 0 2282 102 7 0 chr2 228352569 228352874 -22334980 - AluSx SINE Alu -5 307 1 908 186 35 0 chr2 228353042 228353214 -22334640 - MER5B DNA MER1_type 0 178 1 22 0 0 0 chr2 228353651 228353673 -22334181 + AT_rich Low_complexity Low_complexity 1 22 0 290 266 68 93 chr2 228353771 228353816 -22334038 - MLT1K LTR MaLR -28 560 515 1882 143 37 50 chr2 228353816 228354194 -22333660 - THE1C LTR MaLR 0 375 3 290 266 68 93 chr2 228354194 228354251 -22333603 - MLT1K LTR MaLR -73 515 458 2270 64 0 45 chr2 228354251 228354565 -22333289 + AluY SINE Alu 1 300 -11 290 266 68 93 chr2 228354565 228354698 -22333156 - MLT1K LTR MaLR -130 458 330 352 298 97 0 chr2 228354818 228354932 -22332922 - MLT1K LTR MaLR -342 246 122 234 284 213 57 chr2 228355037 228355178 -22332676 + MIR3 SINE MIR 32 194 -14 2466 45 0 0 chr2 228355260 228355547 -22332307 + AluY SINE Alu 1 287 -24 180 188 47 0 chr2 228357694 228357758 -22330096 + (TATATG)n Simple_repeat Simple_repeat 5 71 0 21 36 0 0 chr2 228357758 228357786 -22330068 + AT_rich Low_complexity Low_complexity 1 28 0 236 229 0 72 chr2 228358568 228358651 -22329203 + CT-rich Low_complexity Low_complexity 4 80 0 2253 66 0 49 chr2 228360257 228360591 -22327263 - AluY SINE Alu 0 311 1 1222 222 23 80 chr2 228362285 228362672 -22325182 + MLT1A1 LTR MaLR 1 365 0 30 0 0 0 chr2 228362843 228362873 -22324981 + AT_rich Low_complexity Low_complexity 1 30 0 351 278 83 0 chr2 228363460 228363568 -22324286 + L2 LINE L2 3197 3313 0 312 48 0 0 chr2 228363806 228363848 -22324006 + (CA)n Simple_repeat Simple_repeat 2 43 0 2477 62 0 10 chr2 228364090 228364398 -22323456 + AluY SINE Alu 1 305 -6 194 308 81 76 chr2 228364484 228364669 -22323185 + MER5A DNA MER1_type 4 189 0 2158 102 0 45 chr2 228365377 228365690 -22322164 + AluSx SINE Alu 1 299 -13 567 284 149 63 chr2 228366380 228366842 -22321012 - L1ME4a LINE L1 -37 6084 5583 2289 130 39 14 chr2 228367412 228367767 -22320087 - THE1B LTR MaLR 0 364 1 1941 151 118 44 chr2 228368882 228369257 -22318597 + MLT2C2 LTR ERVL 1 414 -50 268 64 43 0 chr2 228369257 228369304 -22318550 + (TG)n Simple_repeat Simple_repeat 2 50 0 1941 151 118 44 chr2 228369304 228369360 -22318494 + MLT2C2 LTR ERVL 414 464 0 992 179 61 54 chr2 228370246 228370704 -22317150 - LTR56 LTR ERV1 -7 569 3 1345 167 10 80 chr2 228370736 228371036 -22316818 - AluJo SINE Alu -33 279 1 310 279 25 0 chr2 228371259 228371338 -22316516 + MER81 DNA DNA 30 110 -4 321 245 21 21 chr2 228372115 228372209 -22315645 - L1MC4 LINE L1 -1337 6705 6612 200 59 29 0 chr2 228372209 228372243 -22315611 + (TTATA)n Simple_repeat Simple_repeat 5 39 0 1823 171 23 3 chr2 228372771 228373185 -22314669 - AluJb SINE Alu 0 420 1 516 246 199 0 chr2 228373215 228373426 -22314428 - MER5C DNA MER1_type -68 256 4 180 0 0 0 chr2 228373592 228373612 -22314242 + (CA)n Simple_repeat Simple_repeat 1 20 0 858 344 90 17 chr2 228374966 228375778 -22312076 + L2 LINE L2 2432 3306 -7 229 288 68 30 chr2 228377909 228378041 -22309813 - L2 LINE L2 -195 3118 2982 1874 133 6 50 chr2 228378067 228378389 -22309465 + AluSg SINE Alu 1 308 -2 299 243 11 124 chr2 228378411 228378596 -22309258 + MER20B DNA MER1_type 7 170 -613 197 31 94 0 chr2 228379046 228379078 -22308776 + A-rich Low_complexity Low_complexity 3 37 0 226 186 23 0 chr2 228379231 228379317 -22308537 + (TA)n Simple_repeat Simple_repeat 2 89 0 1874 144 14 3 chr2 228379318 228379603 -22308251 - AluSx SINE Alu -24 288 1 206 222 0 0 chr2 228381443 228381479 -22306375 + MIR SINE MIR 217 252 -10 23 33 0 0 chr2 228381513 228381543 -22306311 + AT_rich Low_complexity Low_complexity 1 30 0 293 313 114 24 chr2 228383294 228383460 -22304394 - MER5A DNA MER1_type -1 188 8 2248 72 0 65 chr2 228384909 228385230 -22302624 + AluSc SINE Alu 1 300 -9 2077 115 3 10 chr2 228385248 228385560 -22302294 + AluSx SINE Alu 1 310 -2 24 0 0 0 chr2 228385586 228385610 -22302244 + AT_rich Low_complexity Low_complexity 1 24 0 180 111 0 0 chr2 228387591 228387618 -22300236 + (T)n Simple_repeat Simple_repeat 1 27 0 312 221 29 19 chr2 228387997 228388101 -22299753 + (TA)n Simple_repeat Simple_repeat 2 106 0 599 291 64 42 chr2 228388381 228388834 -22299020 + MLT1K LTR MaLR 126 588 0 313 268 122 67 chr2 228388852 228389016 -22298838 - MIR SINE MIR -72 190 18 21 36 0 0 chr2 228389089 228389117 -22298737 + AT_rich Low_complexity Low_complexity 1 28 0 521 265 20 13 chr2 228389246 228389397 -22298457 - MIR SINE MIR -48 214 63 812 137 6 48 chr2 228389601 228389769 -22298085 + L1MA5A LINE L1 6133 6293 -4 880 128 15 8 chr2 228390995 228391128 -22296726 - AluJo SINE Alu -178 134 1 230 294 70 51 chr2 228392411 228392727 -22295127 - HsTC2 DNA Tc2 -1063 835 514 1386 235 62 81 chr2 228393639 228394192 -22293662 - MLT1F LTR MaLR 0 542 1 192 255 97 83 chr2 228394218 228394363 -22293491 + L3 LINE CR1 1167 1313 -264 1661 151 67 27 chr2 228394451 228394750 -22293104 - AluSx SINE Alu -1 311 1 387 0 0 0 chr2 228394848 228394891 -22292963 + (AATAG)n Simple_repeat Simple_repeat 4 46 0 301 216 95 0 chr2 228396129 228396203 -22291651 + MIR SINE MIR 5 85 -177 1793 115 55 78 chr2 228396945 228396987 -22290867 + THE1C LTR MaLR 1 42 -333 2046 106 11 0 chr2 228396987 228397297 -22290557 - AluSc SINE Alu 0 313 1 1793 115 55 78 chr2 228397297 228397637 -22290217 + THE1C LTR MaLR 42 375 0 276 111 67 0 chr2 228397744 228397834 -22290020 + (TA)n Simple_repeat Simple_repeat 2 97 0 2414 90 3 0 chr2 228397920 228398230 -22289624 - AluY SINE Alu 0 311 1 204 440 28 0 chr2 228399659 228399800 -22288054 - MIR3 SINE MIR -48 160 16 201 156 0 0 chr2 228401527 228401559 -22286295 + (TATG)n Simple_repeat Simple_repeat 4 35 0 701 241 0 38 chr2 228401634 228401792 -22286062 - FRAM SINE Alu -25 151 1 2559 161 9 9 chr2 228401914 228402342 -22285512 - MSTA LTR MaLR 0 428 1 299 318 116 17 chr2 228404329 228404502 -22283352 + MIR3 SINE MIR 15 204 -4 1611 187 7 27 chr2 228404539 228404833 -22283021 + AluJb SINE Alu 1 288 -24 491 370 37 5 chr2 228405094 228405310 -22282544 - MIR SINE MIR -28 234 12 214 306 0 0 chr2 228405340 228405389 -22282465 + (CA)n Simple_repeat Simple_repeat 1 49 0 2702 110 0 3 chr2 228405557 228405922 -22281932 - THE1B LTR MaLR 0 364 1 10044 113 31 38 chr2 228405924 228407513 -22280341 - THE1B-int LTR MaLR -2 1578 1 2247 134 3 27 chr2 228407513 228407613 -22280241 - THE1B LTR MaLR 0 364 263 2023 137 76 15 chr2 228407613 228407956 -22279898 - THE1B LTR MaLR 0 364 1 11465 102 8 6 chr2 228407956 228409533 -22278321 - THE1B-int LTR MaLR 0 1580 1 2048 136 72 17 chr2 228409533 228409878 -22277976 - THE1B LTR MaLR 0 364 1 2247 134 3 27 chr2 228409878 228410148 -22277706 - THE1B LTR MaLR -98 266 1 469 265 126 18 chr2 228412146 228412369 -22275485 - MLT1K LTR MaLR -22 566 320 2412 262 67 15 chr2 228412377 228413319 -22274535 + Zaphod DNA AcHobo 10 1000 -3031 546 263 32 23 chr2 228413323 228413540 -22274314 + Zaphod DNA AcHobo 3813 4031 0 2107 86 11 0 chr2 228415171 228415440 -22272414 - AluSp SINE Alu -13 300 29 252 0 0 0 chr2 228416828 228416856 -22270998 + (CA)n Simple_repeat Simple_repeat 2 29 0 195 139 0 0 chr2 228416857 228416893 -22270961 + (CCA)n Simple_repeat Simple_repeat 1 36 0 744 319 176 27 chr2 228418539 228419116 -22268738 + L2 LINE L2 2614 3265 -48 216 0 0 0 chr2 228419269 228419293 -22268561 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 684 201 7 0 chr2 228419358 228419497 -22268357 - MLT1B LTR MaLR 0 390 251 198 395 106 16 chr2 228419889 228420314 -22267540 - L2 LINE L2 -342 2972 2510 273 256 23 70 chr2 228420503 228420632 -22267222 - MIR SINE MIR -69 193 71 192 77 0 0 chr2 228420683 228420709 -22267145 + (TAA)n Simple_repeat Simple_repeat 2 27 0 316 198 129 30 chr2 228420724 228420825 -22267029 + L1M LINE L1 5317 5427 -932 180 0 0 0 chr2 228421386 228421406 -22266448 + (T)n Simple_repeat Simple_repeat 1 20 0 1410 217 84 105 chr2 228421503 228421669 -22266185 + LTR1B LTR ERV1 1 169 -851 1595 74 23 5 chr2 228421669 228421886 -22265968 + AluSc SINE Alu 57 277 -32 198 24 24 49 chr2 228421887 228421928 -22265926 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1410 217 84 105 chr2 228421928 228422718 -22265136 + LTR1B LTR ERV1 168 1020 0 2016 135 49 18 chr2 228423667 228423994 -22263860 - MER1B DNA MER1_type 0 337 1 425 192 250 32 chr2 228424260 228424416 -22263438 - MER106A DNA MER1_type -46 190 1 2059 113 0 17 chr2 228425145 228425438 -22262416 + AluSg1 SINE Alu 1 288 -21 451 260 187 26 chr2 228426265 228426538 -22261316 - MLT1L LTR MaLR -88 527 211 216 333 121 8 chr2 228427282 228427414 -22260440 + L2 LINE L2 2330 2476 -838 191 219 0 94 chr2 228427940 228428004 -22259850 - MIR SINE MIR -164 98 41 216 0 0 0 chr2 228428375 228428399 -22259455 + (TA)n Simple_repeat Simple_repeat 2 25 0 2422 84 0 0 chr2 228428399 228428696 -22259158 - AluY SINE Alu -14 297 1 1903 160 13 19 chr2 228428984 228429291 -22258563 - AluJo SINE Alu -7 305 1 2168 125 0 0 chr2 228432753 228433049 -22254805 - AluSx SINE Alu -16 296 1 806 239 11 11 chr2 228434558 228434734 -22253120 - MER45A DNA AcHobo -2 176 1 2404 125 5 19 chr2 228435405 228435774 -22252080 + THE1B LTR MaLR 1 364 0 410 92 0 15 chr2 228435779 228435844 -22252010 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 219 125 0 0 chr2 228435892 228435932 -22251922 + (TCC)n Simple_repeat Simple_repeat 2 41 0 363 281 140 50 chr2 228435970 228436191 -22251663 - MLT1K LTR MaLR -202 386 146 237 293 13 0 chr2 228436164 228436239 -22251615 - MLT1K LTR MaLR -347 241 166 * 268 265 133 0 chr2 228438904 228438987 -22248867 + MIR SINE MIR 73 166 -96 373 284 37 132 chr2 228439061 228439388 -22248466 + L2 LINE L2 2968 3263 -9 1027 255 103 3 chr2 228439402 228439731 -22248123 - MER89 LTR ERV1 0 559 198 309 188 0 0 chr2 228439705 228439769 -22248085 - MER89 LTR ERV1 -470 89 26 * 25 90 0 0 chr2 228440816 228440883 -22246971 + AT_rich Low_complexity Low_complexity 1 67 0 452 293 61 20 chr2 228441138 228441285 -22246569 + MIR SINE MIR 14 166 -96 294 29 0 0 chr2 228441397 228441432 -22246422 + (TG)n Simple_repeat Simple_repeat 2 36 0 455 252 150 19 chr2 228442322 228442533 -22245321 + L1MEc LINE L1 1048 1280 -5262 3108 124 74 17 chr2 228442692 228443216 -22244638 - MER41C LTR ERV1 0 554 1 318 313 40 66 chr2 228443561 228443759 -22244095 - L1ME LINE L1 -5838 232 40 591 228 209 38 chr2 228443786 228444049 -22243805 + L1ME LINE L1 5480 5787 -383 1068 196 241 5 chr2 228444080 228444442 -22243412 + MLT2B1 LTR ERVL 2 526 -28 447 19 0 0 chr2 228444442 228444494 -22243360 + (CA)n Simple_repeat Simple_repeat 1 52 0 1068 196 241 5 chr2 228444494 228444516 -22243338 + MLT2B1 LTR ERVL 526 542 -12 565 179 12 151 chr2 228445606 228445857 -22241997 - L1MC4 LINE L1 -14 8028 7813 1630 231 287 34 chr2 228445929 228446846 -22241008 - L1MC4 LINE L1 -370 7672 6524 650 276 29 6 chr2 228448802 228448976 -22238878 - MIR SINE MIR 0 262 85 1144 165 19 79 chr2 228448983 228449250 -22238604 - MLT1B LTR MaLR -3 387 137 852 242 0 0 chr2 228449280 228449478 -22238376 + MLT1B LTR MaLR 193 390 0 553 179 16 41 chr2 228449481 228449502 -22238352 - MLT1B LTR MaLR -347 120 100 2809 106 38 14 chr2 228449502 228449521 -22238333 - MER57B LTR ERV1 0 434 417 1973 141 0 3 chr2 228449521 228449844 -22238010 + AluSg SINE Alu 1 310 0 2809 106 38 14 chr2 228449844 228450248 -22237606 - MER57B LTR ERV1 -17 417 1 553 179 16 41 chr2 228450248 228450349 -22237505 - MLT1B LTR MaLR -367 100 1 353 293 0 0 chr2 228450351 228450433 -22237421 - MIR SINE MIR -179 83 2 224 167 0 0 chr2 228450457 228450493 -22237361 - L2 LINE L2 -8 3305 3270 220 233 0 0 chr2 228450790 228450833 -22237021 + L2 LINE L2 3264 3306 -7 2289 83 3 3 chr2 228451255 228451545 -22236309 + AluSp SINE Alu 3 292 -21 222 311 41 49 chr2 228452050 228452172 -22235682 + L2 LINE L2 3184 3304 -9 186 191 0 0 chr2 228452179 228452221 -22235633 + GA-rich Low_complexity Low_complexity 4 45 0 1854 160 7 0 chr2 228452448 228452781 -22235073 + AluSx SINE Alu 1 335 0 1207 255 190 20 chr2 228453371 228453876 -22233978 + MLT1G1 LTR MaLR 3 593 -2 1854 208 78 27 chr2 228453954 228454430 -22233424 + MLT1D LTR MaLR 1 500 -5 2461 43 7 10 chr2 228454964 228455264 -22232590 - AluY SINE Alu -12 299 1 235 330 31 0 chr2 228455392 228455489 -22232365 + L1ME LINE L1 5536 5635 -486 437 75 0 15 chr2 228455831 228455898 -22231956 + (TA)n Simple_repeat Simple_repeat 1 66 0 614 201 50 28 chr2 228456386 228456565 -22231289 - Charlie1a DNA MER1_type -1 1454 1272 1182 251 90 28 chr2 228456613 228457012 -22230842 + MLT1C LTR MaLR 44 467 0 * 2593 210 38 16 chr2 228457012 228457705 -22230149 - Charlie1a DNA MER1_type -179 1276 569 1864 200 115 32 chr2 228457703 228458198 -22229656 - Charlie1a DNA MER1_type -919 536 1 * 201 373 27 18 chr2 228458198 228458308 -22229546 - L2 LINE L2 -504 2810 2700 787 312 35 20 chr2 228458308 228458654 -22229200 - L2 LINE L2 -849 2465 2115 397 121 231 11 chr2 228458781 228458795 -22229059 - L1MA10 LINE L1 -9 6325 6312 488 247 99 6 chr2 228458795 228458957 -22228897 - L1ME1 LINE L1 -30 6136 5960 288 344 69 8 chr2 228459004 228459135 -22228719 - MIR3 SINE MIR -41 167 29 1159 294 55 21 chr2 228459573 228460045 -22227809 - LTR16C LTR ERVL 0 491 4 220 329 176 0 chr2 228460150 228460235 -22227619 + L2 LINE L2 3197 3296 -17 649 343 8 4 chr2 228460305 228460541 -22227313 + MIR SINE MIR 3 239 -23 1886 264 66 14 chr2 228462020 228462577 -22225277 - MLT1E LTR MaLR 0 593 8 25 0 0 0 chr2 228462998 228463023 -22224831 + AT_rich Low_complexity Low_complexity 1 25 0 498 294 44 11 chr2 228465562 228465742 -22222112 + MIR3 SINE MIR 17 202 -6 307 330 37 0 chr2 228466844 228466953 -22220901 + MIR SINE MIR 30 142 -66 338 333 43 8 chr2 228468037 228468154 -22219700 + MER5A DNA MER1_type 68 188 -1 311 253 0 0 chr2 228468985 228469068 -22218786 + MER103 DNA DNA 20 102 -64 419 358 95 5 chr2 228469077 228469298 -22218556 + MIR SINE MIR 8 248 -14 180 77 0 0 chr2 228469307 228469333 -22218521 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 387 253 25 144 chr2 228469666 228469868 -22217986 - MER5B DNA MER1_type 0 178 1 378 91 0 0 chr2 228470208 228470263 -22217591 + (ATG)n Simple_repeat Simple_repeat 3 57 0 2436 57 3 7 chr2 228470542 228470840 -22217014 + AluY SINE Alu 1 297 -14 297 0 0 0 chr2 228470889 228470922 -22216932 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 57 0 0 chr2 228472306 228472341 -22215513 + AT_rich Low_complexity Low_complexity 1 35 0 255 142 57 0 chr2 228473738 228473844 -22214010 + (TA)n Simple_repeat Simple_repeat 2 113 0 1845 171 0 0 chr2 228473932 228474213 -22213641 + AluJo SINE Alu 1 281 -31 1589 195 25 46 chr2 228474434 228474828 -22213026 + MLT1B LTR MaLR 1 386 -4 1481 172 172 0 chr2 228475353 228475650 -22212204 - MER7A DNA MER2_type 0 346 1 500 237 32 51 chr2 228476126 228476282 -22211572 - MER5B DNA MER1_type -25 153 1 232 233 0 0 chr2 228477442 228477485 -22210369 + polypyrimidine Low_complexity Low_complexity 2 44 0 590 140 21 0 chr2 228478406 228478499 -22209355 - 7SLRNA srpRNA srpRNA -27 293 199 2572 71 0 0 chr2 228479296 228479607 -22208247 + AluY SINE Alu 1 311 0 623 241 148 0 chr2 228480953 228481115 -22206739 - MER5A DNA MER1_type 0 189 4 1835 188 0 16 chr2 228481948 228482257 -22205597 - AluJo SINE Alu -1 311 8 2345 97 7 0 chr2 228482600 228482900 -22204954 - AluSx SINE Alu -10 302 1 22 0 0 0 chr2 228485987 228486009 -22201845 + AT_rich Low_complexity Low_complexity 1 22 0 1301 246 76 36 chr2 228486025 228486372 -22201482 - LTR33 LTR ERVL -1 520 145 1824 171 0 10 chr2 228486372 228486696 -22201158 - AluJb SINE Alu 0 312 1 1301 246 76 36 chr2 228486696 228486848 -22201006 - LTR33 LTR ERVL -376 145 1 1251 144 16 40 chr2 228486866 228487116 -22200738 + L1MB5 LINE L1 5931 6174 0 192 286 0 18 chr2 228487969 228488025 -22199829 + MIR3 SINE MIR 145 199 -9 387 289 47 8 chr2 228488036 228488164 -22199690 - MIR SINE MIR -40 222 90 25 31 0 0 chr2 228488856 228488888 -22198966 + AT_rich Low_complexity Low_complexity 1 32 0 327 271 226 13 chr2 228490063 228490218 -22197636 + MER5A DNA MER1_type 2 189 0 379 352 84 5 chr2 228490292 228490505 -22197349 - MIR SINE MIR -27 235 6 704 302 30 25 chr2 228490552 228490916 -22196938 + MER113 DNA MER1_type? 110 475 -46 243 327 88 44 chr2 228491884 228492043 -22195811 + MER5B DNA MER1_type 4 169 -9 718 136 0 0 chr2 228492234 228492344 -22195510 + MSTA LTR MaLR 1 110 -318 1852 151 70 33 chr2 228492355 228492876 -22194978 + MLT2A2 LTR ERVL 1 554 0 1109 170 83 12 chr2 228492889 228493130 -22194724 + MSTA LTR MaLR 171 428 0 186 348 44 44 chr2 228494114 228494272 -22193582 + MIR SINE MIR 20 177 -85 476 286 80 52 chr2 228494853 228495178 -22192676 + MLT1H LTR MaLR 39 372 -177 455 286 126 19 chr2 228495737 228495963 -22191891 + L2 LINE L2 2193 2454 -860 4380 114 15 46 chr2 228495963 228496676 -22191178 + LTR8 LTR ERV1 1 691 0 455 286 126 19 chr2 228496676 228496718 -22191136 + L2 LINE L2 2454 2490 -824 2557 194 39 0 chr2 228497399 228497893 -22189961 - MLT2B1 LTR ERVL -7 513 1 442 141 0 13 chr2 228498803 228498881 -22188973 + Tigger2a DNA MER2_type 1 77 -357 804 251 15 20 chr2 228498888 228499083 -22188771 - MER8 DNA MER2_type -45 194 1 1863 266 36 29 chr2 228499280 228499866 -22187988 - MLT1E LTR MaLR -3 590 1 325 315 42 48 chr2 228499970 228500135 -22187719 + MIR SINE MIR 5 168 -94 288 156 33 67 chr2 228500162 228500252 -22187602 + MIR SINE MIR 141 227 -35 2294 109 3 0 chr2 228501388 228501692 -22186162 - AluSx SINE Alu -7 305 1 180 0 0 0 chr2 228501746 228501766 -22186088 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 277 222 28 19 chr2 228501813 228501921 -22185933 + (CATATA)n Simple_repeat Simple_repeat 1 109 0 293 366 54 23 chr2 228502512 228502733 -22185121 + MIR SINE MIR 35 262 0 463 324 68 36 chr2 228502873 228503123 -22184731 + MIR SINE MIR 3 260 -2 1899 137 0 34 chr2 228503332 228503656 -22184198 + AluSx SINE Alu 1 314 0 449 350 112 40 chr2 228503852 228504473 -22183381 - L2 LINE L2 -92 3221 2563 5621 205 8 10 chr2 228504486 228505822 -22182032 - L1 LINE L1 -1623 4523 3191 284 83 0 0 chr2 228505821 228505869 -22181985 + L1PB1 LINE L1 6104 6151 0 * 247 287 55 73 chr2 228506081 228506245 -22181609 - L2 LINE L2 -775 2539 2379 439 272 168 12 chr2 228506552 228506725 -22181129 - MIR SINE MIR -7 255 56 564 227 0 0 chr2 228507023 228507155 -22180699 - L1P LINE L1 -2699 3447 3316 1692 152 160 11 chr2 228507659 228508021 -22179833 - MSTA LTR MaLR -12 416 1 2824 7 0 0 chr2 228508208 228508512 -22179342 - AluYa5 SINE Alu -7 304 1 6987 40 21 1 chr2 228509240 228510315 -22177539 + L1PA5 LINE L1 5044 6135 -19 390 21 0 0 chr2 228510315 228510362 -22177492 + (TA)n Simple_repeat Simple_repeat 2 48 0 389 152 101 0 chr2 228511284 228511383 -22176471 + MER53 DNA DNA 81 189 0 1986 148 3 0 chr2 228512190 228512487 -22175367 + AluSq SINE Alu 1 298 -15 366 303 63 54 chr2 228513068 228513251 -22174603 - MIR3 SINE MIR -10 198 14 22 35 0 0 chr2 228514128 228514157 -22173697 + AT_rich Low_complexity Low_complexity 1 29 0 2020 138 20 0 chr2 228515270 228515566 -22172288 - AluSx SINE Alu -10 302 1 288 356 40 0 chr2 228515567 228515668 -22172186 + MIR3 SINE MIR 101 205 -3 2419 107 0 0 chr2 228515725 228516033 -22171821 - AluSx SINE Alu -4 308 1 324 350 7 7 chr2 228516037 228516174 -22171680 + MIR3 SINE MIR 68 204 -4 1440 224 28 31 chr2 228517710 228518099 -22169755 + MLT1B LTR MaLR 3 390 0 24 32 0 0 chr2 228519314 228519345 -22168509 + AT_rich Low_complexity Low_complexity 1 31 0 461 319 133 47 chr2 228519936 228520343 -22167511 + L1MC4a LINE L1 5343 5784 -2024 473 293 53 0 chr2 228520567 228520717 -22167137 + MER5A DNA MER1_type 1 158 -31 314 284 60 9 chr2 228520615 228520731 -22167123 - MER5A DNA MER1_type -40 149 28 * 1509 228 77 33 chr2 228520798 228521341 -22166513 + L1MC4a LINE L1 6855 7421 -387 572 246 58 5 chr2 228521374 228521565 -22166289 + L1MD3 LINE L1 7758 7958 -37 185 268 0 0 chr2 228522358 228522399 -22165455 + MIR SINE MIR 222 262 0 286 279 0 58 chr2 228522747 228522833 -22165021 + MER5A DNA MER1_type 33 113 -76 235 366 9 18 chr2 228522880 228522992 -22164862 - MIR SINE MIR -60 148 38 324 319 176 19 chr2 228523007 228523223 -22164631 - MIR SINE MIR 0 262 13 1961 172 0 0 chr2 228523455 228523758 -22164096 + AluJo SINE Alu 2 304 -8 368 278 37 19 chr2 228524125 228524233 -22163621 + MER5A DNA MER1_type 3 112 -77 748 244 23 4 chr2 228524317 228524503 -22163351 + MER5A DNA MER1_type 1 177 -1 245 296 12 37 chr2 228524503 228524551 -22163303 + MER5B DNA MER1_type 39 84 -94 265 294 159 32 chr2 228524571 228524697 -22163157 - MER5B DNA MER1_type 0 178 37 3776 293 54 43 chr2 228524705 228525613 -22162241 + L2 LINE L2 812 1749 -1565 2170 108 7 3 chr2 228525613 228525909 -22161945 - AluSx SINE Alu -15 297 1 3776 293 54 43 chr2 228525909 228526710 -22161144 + L2 LINE L2 1749 2540 -774 257 273 23 57 chr2 228526800 228526888 -22160966 + MIR SINE MIR 45 129 -79 338 202 0 22 chr2 228526897 228526986 -22160868 + (TATG)n Simple_repeat Simple_repeat 1 87 0 1170 282 69 22 chr2 228526992 228527498 -22160356 + L2 LINE L2 2531 3058 -255 534 269 50 0 chr2 228527508 228527649 -22160205 - MER63A DNA MER1_type -10 200 53 227 30 0 30 chr2 228527657 228527690 -22160164 + (TTAA)n Simple_repeat Simple_repeat 4 35 0 998 244 56 38 chr2 228527818 228528137 -22159717 + L1M4 LINE L1 3699 4023 -2123 557 125 31 23 chr2 228528140 228528268 -22159586 - L1MA2 LINE L1 -244 6060 5932 1200 90 6 6 chr2 228528268 228528434 -22159420 + L1MA2 LINE L1 6128 6304 0 1589 215 133 5 chr2 228529710 228530115 -22157739 + MLT2B1 LTR ERVL 8 464 -56 1980 136 28 9 chr2 228530140 228530463 -22157391 - Tigger7 DNA MER2_type 0 2487 2159 1307 138 21 0 chr2 228531228 228531417 -22156437 + AluJo SINE Alu 87 279 -33 4052 160 19 1 chr2 228532095 228533260 -22154594 + L1M2 LINE L1 4597 5779 -512 183 340 0 0 chr2 228534289 228534336 -22153518 - L2 LINE L2 -38 3234 3188 294 290 70 59 chr2 228534424 228534610 -22153244 - L2 LINE L2 -188 3084 2897 201 196 0 0 chr2 228535844 228535890 -22151964 + CT-rich Low_complexity Low_complexity 3 48 0 319 103 21 0 chr2 228536039 228536099 -22151755 - Alu SINE Alu -257 45 1 324 206 0 0 chr2 228536107 228536180 -22151674 - HAL1 LINE L1 -1327 1180 1108 301 283 9 38 chr2 228536180 228536286 -22151568 - L1M4 LINE L1 -3757 2389 2287 32 43 0 0 chr2 228537625 228537671 -22150183 + AT_rich Low_complexity Low_complexity 1 46 0 3365 182 9 2 chr2 228538892 228539470 -22148384 - Tigger6a DNA MER2_type -500 583 2 22 0 0 0 chr2 228539864 228539886 -22147968 + AT_rich Low_complexity Low_complexity 1 22 0 1873 170 32 11 chr2 228540596 228540967 -22146887 + L1MA8 LINE L1 5866 6244 -47 367 239 75 86 chr2 228541346 228541601 -22146253 + MER112 DNA MER1_type 2 253 -3 180 0 0 0 chr2 228541634 228541654 -22146200 + (TC)n Simple_repeat Simple_repeat 2 21 0 231 36 0 0 chr2 228543418 228543446 -22144408 + (T)n Simple_repeat Simple_repeat 1 28 0 229 294 0 0 chr2 228544036 228544104 -22143750 + L2 LINE L2 3204 3271 -1 947 83 6 107 chr2 228544258 228544426 -22143428 + AluSc SINE Alu 79 229 -80 273 353 52 60 chr2 228544527 228544796 -22143058 - L2 LINE L2 -200 3072 2806 182 410 74 0 chr2 228545734 228545829 -22142025 - L2 LINE L2 -199 3073 2972 739 285 140 20 chr2 228545951 228546344 -22141510 - L2 LINE L2 -618 2696 2257 241 195 65 26 chr2 228546553 228546630 -22141224 + L1P4 LINE L1 5692 5771 -390 261 282 18 18 chr2 228546923 228547033 -22140821 + HAL1b LINE L1 1227 1336 -12 280 322 35 17 chr2 228547220 228547335 -22140519 - L2 LINE L2 0 3272 3156 750 105 35 0 chr2 228547372 228547486 -22140368 - MLT1B LTR MaLR 0 390 273 2475 131 31 14 chr2 228548725 228549299 -22138555 - L1PBa LINE L1 -5858 1005 1 2306 110 37 29 chr2 228549310 228549684 -22138170 + Tigger2a DNA MER2_type 16 392 -42 492 287 161 11 chr2 228549690 228549864 -22137990 + MIR SINE MIR 13 212 -50 205 276 40 40 chr2 228550014 228550090 -22137764 - L2 LINE L2 -2 3311 3236 3874 198 17 4 chr2 228551487 228552299 -22135555 + L1 LINE L1 4552 5374 -772 217 174 29 29 chr2 228552550 228552619 -22135235 + (TA)n Simple_repeat Simple_repeat 2 70 0 383 339 90 66 chr2 228552631 228553583 -22134271 + L2 LINE L2 2003 2977 -337 342 294 11 0 chr2 228553953 228554045 -22133809 + L3 LINE CR1 914 1006 -571 228 67 0 0 chr2 228554253 228554283 -22133571 + (TA)n Simple_repeat Simple_repeat 1 30 0 1117 157 8 129 chr2 228554302 228554557 -22133297 - MER8 DNA MER2_type 0 239 16 231 219 24 73 chr2 228554609 228554691 -22133163 - L2 LINE L2 -4 3309 3232 335 250 49 114 chr2 228554840 228555024 -22132830 + MER5B DNA MER1_type 1 172 -6 1729 45 0 0 chr2 228555905 228556104 -22131750 - AluY SINE Alu -112 199 1 3443 269 42 22 chr2 228556104 228556667 -22131187 + L1M4b LINE L1 93 687 -6172 2362 56 13 10 chr2 228556667 228556972 -22130882 - AluY SINE Alu -5 306 1 3443 269 42 22 chr2 228556972 228557433 -22130421 + L1M4b LINE L1 687 1137 -5722 2476 193 21 9 chr2 228557450 228558154 -22129700 + L1M4 LINE L1 5059 5766 -418 1403 199 38 17 chr2 228558154 228558499 -22129355 - MER93a LTR ERV1 0 402 1 358 105 35 0 chr2 228559135 228559192 -22128662 - MADE1 DNA Mariner -21 59 1 1661 193 3 3 chr2 228560860 228561160 -22126694 + AluJb SINE Alu 1 300 -12 22 0 0 0 chr2 228562699 228562721 -22125133 + AT_rich Low_complexity Low_complexity 1 22 0 351 40 81 0 chr2 228563505 228563579 -22124275 + (TA)n Simple_repeat Simple_repeat 2 81 0 723 187 8 0 chr2 228564427 228564561 -22123293 + FLAM_C SINE Alu 1 135 -8 1164 225 51 80 chr2 228564759 228565247 -22122607 - MER110A LTR ERV1 -4 464 36 3049 140 9 16 chr2 228565749 228566343 -22121511 - L1M1 LINE L1 -534 5769 5181 2367 158 18 5 chr2 228566341 228566790 -22121064 - L1M4c LINE L1 -5208 1176 722 * 1734 186 0 7 chr2 228566792 228567093 -22120761 - L1M4c LINE L1 -6067 317 19 945 207 39 69 chr2 228567114 228567257 -22120597 - L1MC4 LINE L1 -1 8041 7895 351 44 0 0 chr2 228567257 228567302 -22120552 + (TG)n Simple_repeat Simple_repeat 2 46 0 945 207 39 69 chr2 228567302 228567491 -22120363 - L1MC4 LINE L1 -147 7895 7719 350 260 10 0 chr2 228567699 228567795 -22120059 - L1M4 LINE L1 -856 5290 5194 1431 143 50 100 chr2 228567795 228568096 -22119758 - AluJo SINE Alu 0 312 27 312 132 13 26 chr2 228568107 228568183 -22119671 - L1M4 LINE L1 -945 5201 5127 2115 228 107 8 chr2 228568309 228568966 -22118888 - L1M4 LINE L1 -1725 4421 3700 1067 130 16 0 chr2 228570079 228570263 -22117591 - L1MA6 LINE L1 0 6300 6114 769 274 92 1 chr2 228570383 228570664 -22117190 + MLT1G1 LTR MaLR 186 553 -2 312 320 108 27 chr2 228571327 228571661 -22116193 - L1M4 LINE L1 -747 5399 5039 247 114 0 0 chr2 228571677 228571712 -22116142 - L1M4 LINE L1 -2589 3557 3523 229 150 0 117 chr2 228571718 228571778 -22116076 - L1M4 LINE L1 -1467 4679 4627 2474 84 0 0 chr2 228571960 228572270 -22115584 - AluSq SINE Alu -3 310 1 207 283 76 33 chr2 228572417 228572509 -22115345 + L2 LINE L2 2712 2807 -507 428 386 26 0 chr2 228572642 228572795 -22115059 + MER91A DNA MER1_type 40 196 0 21 0 0 0 chr2 228572838 228572859 -22114995 + AT_rich Low_complexity Low_complexity 1 21 0 477 298 105 92 chr2 228573098 228573743 -22114111 - L2 LINE L2 -411 2903 2250 773 244 9 26 chr2 228573786 228574015 -22113839 - MER46C DNA MER2_type -113 225 1 408 218 148 35 chr2 228574015 228574157 -22113697 - MIR SINE MIR -64 198 41 * 473 360 61 7 chr2 228574155 228574452 -22113402 - L2 LINE L2 -1297 2017 1705 201 335 68 41 chr2 228574654 228574920 -22112934 - L2 LINE L2 -1929 1385 1113 699 204 39 55 chr2 228575017 228575052 -22112802 - MER5B DNA MER1_type 0 178 144 2272 117 0 0 chr2 228575052 228575361 -22112493 + AluSc SINE Alu 1 309 0 699 204 39 55 chr2 228575361 228575506 -22112348 - MER5B DNA MER1_type -34 144 1 608 273 130 36 chr2 228575544 228575852 -22112002 - MLT1I LTR MaLR 0 409 73 764 274 61 0 chr2 228575954 228576166 -22111688 - MIR SINE MIR -10 252 28 309 294 119 0 chr2 228580327 228580470 -22107384 - Charlie7 DNA MER1_type -2448 164 5 246 202 60 0 chr2 228581511 228581595 -22106259 + (TA)n Simple_repeat Simple_repeat 2 90 0 237 359 56 60 chr2 228581772 228581884 -22105970 - MIR SINE MIR -11 251 140 539 177 83 44 chr2 228581884 228582065 -22105789 + MER53 DNA DNA 1 188 -1 237 359 56 60 chr2 228582065 228582203 -22105651 - MIR SINE MIR -122 140 2 1886 140 140 53 chr2 228582240 228582634 -22105220 + MSTA LTR MaLR 1 428 0 1307 226 103 12 chr2 228582669 228583094 -22104760 - MLT1C LTR MaLR -2 465 2 191 77 0 51 chr2 228584648 228584687 -22103167 + (TATG)n Simple_repeat Simple_repeat 2 38 0 2059 150 0 3 chr2 228584772 228585079 -22102775 + AluSx SINE Alu 1 306 -6 213 232 0 0 chr2 228585111 228585180 -22102674 + (TG)n Simple_repeat Simple_repeat 2 70 0 490 217 12 0 chr2 228585208 228585369 -22102485 + (TG)n Simple_repeat Simple_repeat 2 164 0 347 237 0 15 chr2 228585350 228585481 -22102373 + (TATATG)n Simple_repeat Simple_repeat 6 134 0 * 331 237 139 35 chr2 228585897 228586070 -22101784 + L2 LINE L2 3026 3216 -97 411 311 57 0 chr2 228586399 228586521 -22101333 + MIR SINE MIR 25 153 -109 288 0 0 0 chr2 228586564 228586596 -22101258 + (TG)n Simple_repeat Simple_repeat 2 33 0 1422 205 43 0 chr2 228587998 228588301 -22099553 + LTR32 LTR ERVL 20 335 -136 737 178 7 7 chr2 228588362 228588508 -22099346 + LTR32 LTR ERVL 324 469 -2 473 219 25 8 chr2 228590189 228590308 -22097546 + MLT1H1 LTR MaLR 1 121 -434 486 279 68 26 chr2 228590586 228590926 -22096928 - MLT1G3 LTR MaLR 0 595 155 421 224 177 27 chr2 228591178 228591325 -22096529 + MER63A DNA MER1_type 32 200 -10 271 253 33 11 chr2 228591392 228591404 -22096450 - L2 LINE L2 -338 2976 2966 396 0 0 0 chr2 228591404 228591448 -22096406 + (TA)n Simple_repeat Simple_repeat 2 45 0 271 253 33 11 chr2 228591448 228591526 -22096328 - L2 LINE L2 -348 2966 2884 529 272 54 0 chr2 228592865 228593012 -22094842 + L2 LINE L2 3159 3313 0 303 122 0 0 chr2 228593434 228593483 -22094371 + (TA)n Simple_repeat Simple_repeat 1 49 0 2637 93 6 0 chr2 228593716 228594069 -22093785 - THE1A LTR MaLR 0 355 1 9012 98 119 4 chr2 228594069 228595486 -22092368 - THE1A-int LTR MaLR 0 1580 2 1560 112 4 0 chr2 228595487 228595720 -22092134 - THE1A LTR MaLR 0 355 122 5070 169 15 5 chr2 228595836 228597404 -22090450 - L1PB4 LINE L1 -4 6152 4566 669 302 85 8 chr2 228598481 228598739 -22089115 - L2 LINE L2 -21 3292 3015 264 59 0 0 chr2 228599052 228599086 -22088768 + (A)n Simple_repeat Simple_repeat 1 34 0 323 318 168 0 chr2 228599285 228599458 -22088396 + MLT1K LTR MaLR 37 238 -350 412 304 0 23 chr2 228599603 228599774 -22088080 + MLT1K LTR MaLR 419 585 -3 30 100 0 0 chr2 228600077 228600177 -22087677 + AT_rich Low_complexity Low_complexity 1 100 0 1860 105 63 3 chr2 228600488 228600774 -22087080 - L1MC1 LINE L1 -15 6318 6016 867 191 62 29 chr2 228601199 228601543 -22086311 - MSTD LTR MaLR 0 365 3 364 235 32 9 chr2 228602865 228602979 -22084875 + MIR3 SINE MIR 91 207 -1 39 38 0 0 chr2 228603169 228603222 -22084632 + AT_rich Low_complexity Low_complexity 1 53 0 424 341 28 22 chr2 228603675 228603857 -22083997 - MER5A DNA MER1_type 0 189 7 12427 146 20 8 chr2 228605349 228607500 -22080354 + Tigger1 DNA MER2_type 242 2418 0 628 269 83 90 chr2 228607501 228607829 -22080025 + MLT1H LTR MaLR 105 434 -115 1680 161 60 35 chr2 228607829 228608195 -22079659 - THE1C LTR MaLR 0 375 1 9330 140 41 7 chr2 228608196 228609722 -22078132 - THE1C-int LTR MaLR -1 1579 1 2369 135 8 16 chr2 228609722 228610100 -22077754 - THE1C LTR MaLR 0 375 1 628 269 83 90 chr2 228610100 228610214 -22077640 + MLT1H LTR MaLR 432 547 -2 482 318 106 28 chr2 228611101 228611497 -22076357 - MLT1K LTR MaLR -18 570 144 21 0 0 0 chr2 228612804 228612825 -22075029 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr2 228613613 228613659 -22074195 + (CA)n Simple_repeat Simple_repeat 1 46 0 216 360 145 28 chr2 228614978 228615267 -22072587 + L2 LINE L2 2945 3267 -5 188 246 82 16 chr2 228615645 228615706 -22072148 - MIR SINE MIR -89 173 109 307 346 0 0 chr2 228615814 228615947 -22071907 + L1ME LINE L1 5576 5708 -413 2579 137 40 7 chr2 228615964 228616408 -22071446 + L1PA13 LINE L1 5704 6162 -1 499 227 38 142 chr2 228616452 228616791 -22071063 + L1MC4 LINE L1 7739 8042 0 248 255 26 33 chr2 228616815 228616968 -22070886 + L1ME LINE L1 5710 5861 -260 21 36 0 0 chr2 228617170 228617198 -22070656 + AT_rich Low_complexity Low_complexity 1 28 0 2038 125 4 0 chr2 228617201 228617519 -22070335 + AluSx SINE Alu 1 319 0 458 311 49 18 chr2 228617774 228617938 -22069916 + MIR SINE MIR 22 190 -72 2356 109 0 0 chr2 228618830 228619142 -22068712 - AluSx SINE Alu 0 312 1 210 37 0 0 chr2 228619145 228619172 -22068682 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2063 135 0 0 chr2 228619174 228619463 -22068391 - AluSx SINE Alu -19 293 5 2223 120 3 0 chr2 228620129 228620429 -22067425 + AluSx SINE Alu 6 306 -6 233 348 7 44 chr2 228620504 228620639 -22067215 - MIR SINE MIR -111 151 22 183 100 0 0 chr2 228620967 228620997 -22066857 + (TAAAAA)n Simple_repeat Simple_repeat 4 33 0 1968 129 0 11 chr2 228621580 228621891 -22065963 - AluSx SINE Alu 0 308 1 238 351 48 97 chr2 228622662 228622930 -22064924 - L2 LINE L2 -3 3269 3015 330 231 0 13 chr2 228623441 228623516 -22064338 + AluJ SINE Alu 69 142 -160 1421 167 57 20 chr2 228623516 228623816 -22064038 - THE1C LTR MaLR 0 375 65 3311 132 140 0 chr2 228623823 228624416 -22063438 - THE1C-int LTR MaLR -902 678 3 1041 134 6 17 chr2 228624418 228624739 -22063115 - THE1C LTR MaLR 0 375 1 1160 137 0 0 chr2 228624743 228624904 -22062950 + AluJ SINE Alu 144 304 -8 431 324 0 14 chr2 228625005 228625147 -22062707 + (TATATG)n Simple_repeat Simple_repeat 5 144 0 5998 54 20 3 chr2 228627652 228628435 -22059419 - L1P LINE L1 -2413 3733 2937 3280 42 0 11 chr2 228628435 228628815 -22059039 + L1PA5 LINE L1 5777 6154 0 5172 140 27 26 chr2 228629057 228629418 -22058436 - L1PB4 LINE L1 0 6156 5797 189 0 0 0 chr2 228629418 228629439 -22058415 + (TG)n Simple_repeat Simple_repeat 2 22 0 5172 140 27 26 chr2 228629439 228630070 -22057784 - L1PB4 LINE L1 -359 5797 5160 2331 76 3 0 chr2 228631473 228631761 -22056093 - AluY SINE Alu -22 289 1 285 330 0 0 chr2 228632034 228632134 -22055720 + (CATA)n Simple_repeat Simple_repeat 2 101 0 271 176 0 27 chr2 228633249 228633323 -22054531 + (TA)n Simple_repeat Simple_repeat 1 72 0 192 77 0 0 chr2 228633546 228633572 -22054282 + (A)n Simple_repeat Simple_repeat 1 26 0 500 252 34 14 chr2 228635395 228635542 -22052312 - MER69 DNA AcHobo -874 352 203 245 305 48 30 chr2 228635786 228635953 -22051901 + L1ME4a LINE L1 5950 6119 -2 2004 126 7 14 chr2 228636147 228636440 -22051414 - AluSx SINE Alu -21 291 1 3116 40 56 8 chr2 228636778 228637173 -22050681 - L1PA4 LINE L1 -1 6154 5741 552 238 98 24 chr2 228637239 228637425 -22050429 - MIR SINE MIR -62 200 5 21 0 0 0 chr2 228637554 228637575 -22050279 + AT_rich Low_complexity Low_complexity 1 21 0 2140 120 3 0 chr2 228638155 228638455 -22049399 + AluSq SINE Alu 1 301 -12 535 179 0 0 chr2 228638959 228639043 -22048811 + AluJ/FLAM SINE Alu 1 84 -228 326 290 107 49 chr2 228639460 228639684 -22048170 + MIR SINE MIR 20 256 -6 389 289 94 50 chr2 228640004 228640322 -22047532 - L2 LINE L2 0 3313 2982 1431 140 12 62 chr2 228640409 228640666 -22047188 - AluSq SINE Alu -1 312 69 192 77 0 0 chr2 228640764 228640790 -22047064 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 216 97 0 0 chr2 228642058 228642089 -22045765 + (A)n Simple_repeat Simple_repeat 1 31 0 2171 92 16 22 chr2 228642249 228642563 -22045291 + AluSx SINE Alu 1 312 0 455 268 145 22 chr2 228642758 228642986 -22044868 + L1ME3A LINE L1 5612 5824 -297 180 111 0 0 chr2 228643480 228643507 -22044347 + (TG)n Simple_repeat Simple_repeat 2 28 0 890 207 17 0 chr2 228643656 228643835 -22044019 + MER5A DNA MER1_type 1 182 -7 529 322 13 13 chr2 228643996 228644145 -22043709 + MIR SINE MIR 17 165 -97 810 154 35 0 chr2 228644155 228644298 -22043556 - THE1C LTR MaLR 0 375 228 842 263 112 71 chr2 228694635 228695083 -21992771 + MLT1H LTR MaLR 80 545 -4 186 133 0 0 chr2 228695225 228695255 -21992599 + (CA)n Simple_repeat Simple_repeat 2 31 0 2001 139 0 0 chr2 228695323 228695610 -21992244 - AluSx SINE Alu -25 287 1 304 245 53 0 chr2 228696257 228696351 -21991503 - LTR33A LTR ERVL 0 523 425 1345 136 0 60 chr2 228696356 228696591 -21991263 - AluSc SINE Alu -9 300 80 579 267 69 99 chr2 228696617 228696962 -21990892 - LTR33A LTR ERVL -129 394 60 1805 175 0 0 chr2 228696962 228697276 -21990578 + AluJo SINE Alu 1 314 0 579 267 69 99 chr2 228697276 228697333 -21990521 - LTR33A LTR ERVL -463 60 3 1035 303 140 33 chr2 228697348 228698516 -21989338 + L1ME LINE L1 3715 5006 -1140 694 236 54 81 chr2 228698734 228698788 -21989066 - MIR SINE MIR -10 252 198 261 0 0 0 chr2 228698788 228698817 -21989037 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 71 0 0 chr2 228698816 228698844 -21989010 + (CATATA)n Simple_repeat Simple_repeat 3 30 0 * 694 236 54 81 chr2 228698817 228698892 -21988962 - MIR SINE MIR -64 198 123 2528 118 6 8 chr2 228698892 228699257 -21988597 - THE1B LTR MaLR 0 364 1 694 236 54 81 chr2 228699257 228699412 -21988442 - MIR SINE MIR -139 123 1 280 276 13 13 chr2 228699549 228699625 -21988229 + L2 LINE L2 3193 3268 -4 338 283 60 23 chr2 228699645 228700017 -21987837 + L1ME LINE L1 5086 5473 -689 2028 43 8 4 chr2 228700135 228700389 -21987465 + AluY SINE Alu 47 301 -10 3291 122 27 19 chr2 228700505 228701028 -21986826 + MER1A DNA MER1_type 1 527 0 1051 150 173 26 chr2 228701038 228701246 -21986608 - MER44D DNA MER2_type -1885 606 430 183 42 0 0 chr2 228701246 228701270 -21986584 + (TC)n Simple_repeat Simple_repeat 1 24 0 1051 150 173 26 chr2 228701270 228701327 -21986527 - MER44D DNA MER2_type -2061 430 32 185 0 40 0 chr2 228701821 228701846 -21986008 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 238 167 74 37 chr2 228701943 228701997 -21985857 + L2 LINE L2 3217 3272 0 1293 204 19 43 chr2 228702085 228702408 -21985446 + L1MA10 LINE L1 6017 6331 -3 402 255 121 40 chr2 228702992 228703141 -21984713 + MIR SINE MIR 53 213 -49 1318 265 60 58 chr2 228703282 228703802 -21984052 + MLT1G1 LTR MaLR 75 595 0 34 65 0 0 chr2 228705235 228705297 -21982557 + AT_rich Low_complexity Low_complexity 1 62 0 189 0 0 0 chr2 228706110 228706131 -21981723 + (CA)n Simple_repeat Simple_repeat 2 22 0 22 0 0 0 chr2 228707755 228707777 -21980077 + AT_rich Low_complexity Low_complexity 1 22 0 344 243 163 45 chr2 228708094 228708383 -21979471 + MLT1J2 LTR MaLR 75 414 -7 317 381 48 0 chr2 228709578 228709704 -21978150 - L2 LINE L2 0 3272 3141 616 274 81 4 chr2 228709929 228710177 -21977677 - L1ME4a LINE L1 -69 6052 5786 791 282 115 49 chr2 228710178 228710599 -21977255 - LTR67 LTR ERVL 0 557 109 1203 141 0 81 chr2 228710599 228710847 -21977007 + MLT1B LTR MaLR 1 228 -162 232 311 20 66 chr2 228710961 228711112 -21976742 + MER5B DNA MER1_type 2 145 -33 316 273 96 35 chr2 228711422 228711562 -21976292 + L1MC/D LINE L1 4931 5088 -1058 2289 114 0 3 chr2 228711562 228711869 -21975985 - AluSq SINE Alu -7 306 1 316 273 96 35 chr2 228711869 228711926 -21975928 + L1MC/D LINE L1 5088 5140 -1006 845 191 38 25 chr2 228711927 228712084 -21975770 - AluJb SINE Alu -23 289 131 198 71 0 0 chr2 228712088 228712116 -21975738 + (TA)n Simple_repeat Simple_repeat 1 28 0 329 290 69 33 chr2 228712688 228712933 -21974921 + L1MC/D LINE L1 5575 5828 -1980 885 286 105 59 chr2 228712936 228713330 -21974524 + L1ME LINE L1 20 394 -5676 3716 132 15 37 chr2 228713330 228713984 -21973870 + L1PA15 LINE L1 5523 6162 -3 885 286 105 59 chr2 228713984 228714612 -21973242 + L1ME LINE L1 394 1089 -4981 1514 237 120 8 chr2 228714619 228715134 -21972720 + L1ME1 LINE L1 5550 6122 -44 206 118 66 40 chr2 228715336 228715412 -21972442 + (TA)n Simple_repeat Simple_repeat 2 79 0 216 303 242 0 chr2 228715428 228715527 -21972327 - L2 LINE L2 -1 3312 3190 1003 214 100 19 chr2 228716049 228716361 -21971493 - MSTD LTR MaLR -2 394 1 293 231 80 39 chr2 228716905 228717043 -21970811 - L1ME4a LINE L1 -536 5585 5436 1064 269 107 42 chr2 228717780 228718456 -21969398 + MER20B DNA MER1_type 1 779 -4 194 105 26 0 chr2 228718646 228718684 -21969170 + CT-rich Low_complexity Low_complexity 2 40 0 2405 152 34 13 chr2 228719147 228719613 -21968241 - L1 LINE L1 -1395 4751 4276 3193 165 44 110 chr2 228719613 228719845 -21968009 + L1MA9 LINE L1 4687 4933 -1379 5719 45 1 0 chr2 228719845 228720537 -21967317 + L1PA5 LINE L1 5455 6147 -7 3193 165 44 110 chr2 228720537 228720848 -21967006 + L1MA9 LINE L1 4933 5263 -1049 180 0 0 0 chr2 228720848 228720868 -21966986 + (CATA)n Simple_repeat Simple_repeat 2 21 0 3193 165 44 110 chr2 228720868 228721249 -21966605 + L1MA9 LINE L1 5263 5668 -644 1048 89 0 0 chr2 228721249 228721384 -21966470 + AluSp/q SINE Alu 161 295 -18 3193 165 44 110 chr2 228721384 228721552 -21966302 + L1MA9 LINE L1 5668 5846 -466 372 22 0 0 chr2 228721552 228721597 -21966257 + (TG)n Simple_repeat Simple_repeat 2 46 0 284 78 39 0 chr2 228721597 228721648 -21966206 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 3193 165 44 110 chr2 228721648 228722153 -21965701 + L1MA9 LINE L1 5844 6290 -22 403 283 94 17 chr2 228722591 228722771 -21965083 - MER102a DNA MER1_type -26 304 111 1011 141 24 38 chr2 228722988 228723201 -21964653 + L1MA4 LINE L1 6090 6299 -1 354 363 71 6 chr2 228723318 228723486 -21964368 + MIR3 SINE MIR 30 208 0 41 36 0 0 chr2 228723908 228723963 -21963891 + AT_rich Low_complexity Low_complexity 1 55 0 615 195 8 39 chr2 228726077 228726205 -21961649 - MER63 DNA MER1_type -309 753 4 265 234 0 31 chr2 228726810 228726874 -21960980 - MIR SINE MIR -129 79 18 323 281 161 62 chr2 228726952 228727194 -21960660 - MLT1K LTR MaLR -29 559 294 21 0 0 0 chr2 228727982 228728003 -21959851 + AT_rich Low_complexity Low_complexity 1 21 0 476 208 59 10 chr2 228728132 228728233 -21959621 + MER5A DNA MER1_type 84 189 0 238 325 75 0 chr2 228728243 228728323 -21959531 + MIR SINE MIR 104 189 -73 455 339 77 9 chr2 228729442 228729663 -21958191 + MIR SINE MIR 20 255 -7 22 0 0 0 chr2 228736663 228736685 -21951169 + AT_rich Low_complexity Low_complexity 1 22 0 220 127 25 38 chr2 228736714 228736786 -21951068 + (TA)n Simple_repeat Simple_repeat 2 74 -5 2092 109 32 0 chr2 228736786 228737070 -21950784 - AluSx SINE Alu -19 293 1 220 127 25 38 chr2 228737070 228737076 -21950778 + (TA)n Simple_repeat Simple_repeat 74 79 0 216 0 0 0 chr2 228737247 228737271 -21950583 + (TG)n Simple_repeat Simple_repeat 2 25 0 2548 49 0 10 chr2 228738990 228739298 -21948556 - AluY SINE Alu -6 305 1 208 254 0 0 chr2 228739307 228739362 -21948492 + (TA)n Simple_repeat Simple_repeat 1 55 0 360 0 0 0 chr2 228740301 228740341 -21947513 + (CA)n Simple_repeat Simple_repeat 1 40 0 180 111 0 0 chr2 228740343 228740370 -21947484 + (CCA)n Simple_repeat Simple_repeat 1 27 0 183 100 0 0 chr2 228741043 228741073 -21946781 + (A)n Simple_repeat Simple_repeat 1 30 0 194 387 0 0 chr2 228741422 228741484 -21946370 - L2 LINE L2 -61 3211 3150 251 299 11 0 chr2 228741901 228741988 -21945866 + (TA)n Simple_repeat Simple_repeat 1 88 0 577 300 17 6 chr2 228742092 228742282 -21945572 + L1ME4a LINE L1 5465 5641 -480 345 343 99 0 chr2 228742822 228743035 -21944819 + L1ME4a LINE L1 5667 5900 -221 477 325 99 14 chr2 228743040 228743252 -21944602 - MIR SINE MIR 0 262 33 2366 79 3 13 chr2 228744158 228744475 -21943379 + THE1C LTR MaLR 62 375 0 276 206 21 10 chr2 228744556 228744653 -21943201 + CT-rich Low_complexity Low_complexity 3 100 0 298 292 39 15 chr2 228746888 228747018 -21940836 + MIR SINE MIR 74 206 -56 21 0 0 0 chr2 228747335 228747356 -21940498 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr2 228747578 228747623 -21940231 + AT_rich Low_complexity Low_complexity 1 45 0 2684 35 0 0 chr2 228747755 228748066 -21939788 + AluY SINE Alu 1 311 0 2040 136 10 0 chr2 228748076 228748377 -21939477 + AluJb SINE Alu 1 304 -8 362 226 11 21 chr2 228748482 228748575 -21939279 - MER5A DNA MER1_type -89 100 9 234 0 0 0 chr2 228749130 228749156 -21938698 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2026 130 11 0 chr2 228749156 228749440 -21938414 - AluSx SINE Alu -25 287 1 385 222 71 24 chr2 228750012 228750149 -21937705 + MIR SINE MIR 45 188 -65 261 330 45 0 chr2 228750424 228750512 -21937342 + MIR SINE MIR 97 188 -74 2308 95 0 7 chr2 228750560 228750866 -21936988 + AluSc SINE Alu 1 304 -5 293 236 71 79 chr2 228751706 228751846 -21936008 - L2 LINE L2 -6 3307 3169 2041 130 13 7 chr2 228752358 228752666 -21935188 + AluSg SINE Alu 1 310 0 564 171 11 123 chr2 228752675 228752862 -21934992 - MER3 DNA MER1_type -43 166 1 492 257 179 11 chr2 228752939 228753118 -21934736 + MIR SINE MIR 52 260 -2 385 284 80 70 chr2 228754267 228754468 -21933386 - MER102b DNA MER1_type -10 331 129 512 222 181 7 chr2 228756758 228756902 -21930952 - MLT1H LTR MaLR 0 549 381 196 273 36 0 chr2 228757093 228757148 -21930706 - L2 LINE L2 0 3313 3257 236 343 20 41 chr2 228757152 228757243 -21930611 - L2 LINE L2 -185 3087 2999 2095 133 128 18 chr2 228757243 228757634 -21930220 + Tigger2a DNA MER2_type 1 434 0 236 343 20 41 chr2 228757634 228757688 -21930166 - L2 LINE L2 -273 2999 2945 1451 218 9 46 chr2 228757692 228757956 -21929898 - MER58B DNA MER1_type -2082 338 89 4882 116 10 4 chr2 228757956 228758621 -21929233 - L1PA14 LINE L1 0 6161 5490 2522 67 0 6 chr2 228758621 228758934 -21928920 - AluY SINE Alu 0 311 1 4882 116 10 4 chr2 228758934 228758994 -21928860 - L1PA14 LINE L1 -671 5490 5432 1451 218 9 46 chr2 228758994 228759077 -21928777 - MER58B DNA MER1_type -2331 89 4 317 280 12 12 chr2 228759291 228759385 -21928469 - MIR SINE MIR -63 145 56 966 176 58 0 chr2 228760864 228761052 -21926802 + MER3 DNA MER1_type 1 199 -10 1871 175 7 0 chr2 228761151 228761459 -21926395 - AluJb SINE Alu -2 310 1 239 173 0 5 chr2 228762454 228762651 -21925203 + AluSx SINE Alu 1 295 -7 351 78 0 0 chr2 228762667 228762718 -21925136 + (TG)n Simple_repeat Simple_repeat 2 52 0 431 280 76 23 chr2 228762785 228762917 -21924937 + MIR SINE MIR 64 202 -60 264 137 0 0 chr2 228763663 228763714 -21924140 + (TA)n Simple_repeat Simple_repeat 1 51 0 226 65 22 22 chr2 228764135 228764181 -21923673 + (TA)n Simple_repeat Simple_repeat 1 46 0 433 328 48 37 chr2 228764379 228764647 -21923207 - L3b LINE CR1 -211 1372 1102 440 288 32 22 chr2 228766492 228766674 -21921180 + MIR SINE MIR 17 207 -55 194 245 20 0 chr2 228766677 228766726 -21921128 + L2 LINE L2 753 802 -2512 528 309 42 92 chr2 228766726 228766889 -21920965 + L2 LINE L2 927 1067 -2247 2006 133 0 14 chr2 228766889 228767235 -21920619 + AluSx SINE Alu 1 342 0 528 309 42 92 chr2 228767235 228767407 -21920447 + L2 LINE L2 1067 1246 -2068 273 254 15 82 chr2 228767411 228767545 -21920309 + L2 LINE L2 1351 1475 -1839 2248 119 0 0 chr2 228768675 228768977 -21918877 - AluY SINE Alu -9 302 1 656 188 80 7 chr2 228769027 228769165 -21918689 + MIR SINE MIR 82 229 -33 387 268 98 0 chr2 228769257 228769369 -21918485 + L2 LINE L2 3177 3299 -14 194 175 100 0 chr2 228769586 228769626 -21918228 - MIR SINE MIR -186 76 33 836 225 75 28 chr2 228770146 228770582 -21917272 + LTR56 LTR ERV1 12 569 -7 403 183 49 12 chr2 228771651 228771733 -21916121 - MER21B LTR ERV1 -124 739 655 * 1167 233 52 52 chr2 228771732 228772075 -21915779 - MER21B LTR ERV1 -173 690 348 725 193 41 0 chr2 228772119 228772264 -21915590 - MER21B LTR ERV1 -615 248 98 13574 183 24 8 chr2 228772306 228776109 -21911745 - L1MA8 LINE L1 -5 6286 2425 404 228 43 0 chr2 228776145 228776237 -21911617 - MER21B LTR ERV1 -767 96 1 2242 108 7 3 chr2 228776267 228776572 -21911282 + AluSp SINE Alu 5 310 -3 1603 190 22 0 chr2 228776573 228776894 -21910960 - L1MC1 LINE L1 -5 6328 6001 2212 83 42 7 chr2 228777398 228777687 -21910167 - AluY SINE Alu -12 299 1 4562 55 0 12 chr2 228777885 228778485 -21909369 - L1PA5 LINE L1 0 6154 5563 235 220 34 0 chr2 228778964 228779023 -21908831 + (CATA)n Simple_repeat Simple_repeat 4 64 0 997 214 119 65 chr2 228779897 228780267 -21907587 + MLT1B LTR MaLR 1 390 0 209 200 0 0 chr2 228781792 228781827 -21906027 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1829 148 26 7 chr2 228782015 228782318 -21905536 + AluSx SINE Alu 1 309 -3 2023 235 28 4 chr2 228783705 228784198 -21903656 - MLT1D LTR MaLR 0 505 1 26 50 0 0 chr2 228784861 228784901 -21902953 + AT_rich Low_complexity Low_complexity 1 40 0 1577 170 9 53 chr2 228785617 228785940 -21901914 - AluJb SINE Alu -3 309 1 22 56 0 0 chr2 228785961 228785997 -21901857 + AT_rich Low_complexity Low_complexity 1 36 0 567 303 124 20 chr2 228786717 228787322 -21900532 - L1ME3A LINE L1 -206 5964 5297 730 161 8 0 chr2 228787344 228787468 -21900386 + AluJb SINE Alu 1 125 -187 928 116 9 0 chr2 228787472 228787690 -21900164 + (TA)n Simple_repeat Simple_repeat 1 220 0 21 0 0 0 chr2 228788066 228788087 -21899767 + AT_rich Low_complexity Low_complexity 1 21 0 245 158 66 0 chr2 228788806 228788882 -21898972 + (TTTA)n Simple_repeat Simple_repeat 1 81 0 248 252 153 18 chr2 228790133 228790244 -21897610 - MER91A DNA MER1_type -70 126 1 388 357 45 45 chr2 228791793 228792213 -21895641 + L3 LINE CR1 398 817 -760 339 44 0 0 chr2 228792589 228792634 -21895220 + (CA)n Simple_repeat Simple_repeat 1 45 0 1315 159 9 0 chr2 228792780 228792994 -21894860 + AluJo SINE Alu 86 301 -11 192 357 138 33 chr2 228793069 228793279 -21894575 + L3b LINE CR1 1111 1342 -241 207 100 0 0 chr2 228793318 228793348 -21894506 + (TAGA)n Simple_repeat Simple_repeat 3 32 0 1127 179 5 14 chr2 228793350 228793568 -21894286 + MER96B DNA MER1_type? 12 227 -190 420 97 0 0 chr2 228794343 228794405 -21893449 + (TC)n Simple_repeat Simple_repeat 1 62 0 335 333 114 0 chr2 228795588 228795711 -21892143 + L3 LINE CR1 1174 1310 -267 216 0 0 0 chr2 228795975 228795999 -21891855 + (CA)n Simple_repeat Simple_repeat 1 24 0 2094 135 0 3 chr2 228796022 228796334 -21891520 + AluSx SINE Alu 1 311 -1 22 35 0 0 chr2 228796656 228796685 -21891169 + AT_rich Low_complexity Low_complexity 1 29 0 335 307 10 0 chr2 228797197 228797298 -21890556 + MIR3 SINE MIR 68 169 -39 361 318 39 7 chr2 228797732 228797883 -21889971 + MIR3 SINE MIR 32 187 -21 295 194 39 133 chr2 228798299 228798479 -21889375 - MIR SINE MIR -25 237 75 21 36 0 0 chr2 228798561 228798589 -21889265 + AT_rich Low_complexity Low_complexity 1 28 0 243 395 0 0 chr2 228798629 228798710 -21889144 - L2 LINE L2 -27 3245 3165 27 29 0 0 chr2 228799023 228799057 -21888797 + AT_rich Low_complexity Low_complexity 1 34 0 282 161 86 74 chr2 228799435 228799516 -21888338 - HAL1 LINE L1 -5 2502 2421 966 208 43 50 chr2 228800140 228800462 -21887392 - MER33 DNA MER1_type 0 324 5 269 317 78 43 chr2 228800549 228800779 -21887075 + MER102b DNA MER1_type 102 339 -2 420 243 63 27 chr2 228800781 228800892 -21886962 - MIR3 SINE MIR -48 160 46 544 242 26 53 chr2 228801338 228801565 -21886289 + L1ME2 LINE L1 5882 6102 -62 740 30 40 0 chr2 228802633 228802734 -21885120 + L1MA2 LINE L1 6200 6304 0 359 332 62 57 chr2 228803279 228803523 -21884331 - L3b LINE CR1 -3 1580 1336 225 218 167 0 chr2 228804203 228804281 -21883573 + L1ME LINE L1 5734 5824 -297 1905 121 58 73 chr2 228804324 228804720 -21883134 - MLT1B LTR MaLR 0 390 1 296 344 138 15 chr2 228804761 228804956 -21882898 - MIR SINE MIR -37 225 7 3073 92 5 0 chr2 228805422 228805857 -21881997 + L1PA14 LINE L1 5725 6161 0 231 61 0 0 chr2 228806063 228806096 -21881758 + (TAAAAA)n Simple_repeat Simple_repeat 2 34 0 283 343 64 21 chr2 228806120 228806260 -21881594 + MER5A DNA MER1_type 7 152 -37 211 333 88 50 chr2 228806133 228806292 -21881562 - MER5A DNA MER1_type -4 185 21 * 959 218 202 81 chr2 228806315 228806760 -21881094 - MLT1F1 LTR MaLR 0 567 69 210 118 0 0 chr2 228807363 228807397 -21880457 + (A)n Simple_repeat Simple_repeat 1 34 0 201 283 48 70 chr2 228807561 228807701 -21880153 + MIR3 SINE MIR 19 156 -52 576 154 85 80 chr2 228807701 228807889 -21879965 + MER5A DNA MER1_type 1 189 0 201 283 48 70 chr2 228807889 228807935 -21879919 + MIR3 SINE MIR 156 201 -7 363 331 18 36 chr2 228808075 228808241 -21879613 - MIR3 SINE MIR -43 165 3 2265 103 3 0 chr2 228808425 228808727 -21879127 + AluY SINE Alu 1 303 -8 301 309 16 56 chr2 228809847 228809973 -21877881 + MIR SINE MIR 19 139 -69 490 225 47 47 chr2 228810408 228810537 -21877317 - MER58B DNA MER1_type -15 326 198 1878 149 14 0 chr2 228811413 228811702 -21876152 - AluSx SINE Alu -12 300 8 227 321 26 40 chr2 228811997 228812150 -21875704 + MIR3 SINE MIR 32 180 -28 180 200 0 0 chr2 228812214 228812254 -21875600 + (CA)n Simple_repeat Simple_repeat 2 41 0 285 250 115 0 chr2 228812291 228812387 -21875467 - MER103 DNA DNA -46 120 14 226 197 0 49 chr2 228812451 228812512 -21875342 + MIR3 SINE MIR 151 208 0 1159 204 44 29 chr2 228812653 228813029 -21874825 + MLT2B3 LTR ERVL 174 554 0 337 341 16 23 chr2 228815266 228815395 -21872459 + MIR3 SINE MIR 15 142 -66 1176 188 108 55 chr2 228816330 228816499 -21871355 - MLT1E1 LTR MaLR 0 654 495 2120 131 0 6 chr2 228816499 228816811 -21871043 - AluSx SINE Alu -2 310 1 1176 188 108 55 chr2 228816811 228817198 -21870656 - MLT1E1 LTR MaLR -159 495 1 311 222 28 65 chr2 228817358 228817466 -21870388 - L1ME2 LINE L1 -130 6034 5931 556 271 135 0 chr2 228817476 228817668 -21870186 - L1M4 LINE L1 -2046 4100 3883 596 226 0 66 chr2 228817724 228817905 -21869949 - AluJb SINE Alu -15 297 129 762 278 70 45 chr2 228817910 228818555 -21869299 - L1M4 LINE L1 -2404 3742 3080 504 250 9 0 chr2 228818612 228818728 -21869126 + L1ME2 LINE L1 6039 6155 -9 665 276 122 0 chr2 228818729 228818943 -21868911 + L1MC4 LINE L1 6358 6597 -1445 222 37 0 0 chr2 228818983 228819010 -21868844 + (TG)n Simple_repeat Simple_repeat 2 28 0 250 245 0 0 chr2 228820609 228820658 -21867196 + (TG)n Simple_repeat Simple_repeat 1 49 0 608 295 11 5 chr2 228821189 228821379 -21866475 + MER117 DNA MER1_type 1 191 -6 4033 131 16 2 chr2 228821452 228822077 -21865777 + L1PA16 LINE L1 5524 6157 -9 200 250 11 23 chr2 228822083 228822171 -21865683 + A-rich Low_complexity Low_complexity 2 88 0 326 250 0 0 chr2 228823083 228823147 -21864707 + tRNA-Ile-ATT tRNA tRNA 1 64 -13 324 262 48 0 chr2 228823478 228823562 -21864292 - MIR SINE MIR -7 255 168 25 31 0 0 chr2 228823586 228823618 -21864236 + AT_rich Low_complexity Low_complexity 1 32 0 308 359 63 39 chr2 228823641 228823847 -21864007 + MIR SINE MIR 34 244 -18 404 161 12 0 chr2 228823848 228823929 -21863925 + GA-rich Low_complexity Low_complexity 5 86 0 602 228 144 6 chr2 228824018 228824198 -21863656 - MER58A DNA MER1_type -15 209 5 2173 159 26 0 chr2 228824682 228825066 -21862788 - L1 LINE L1 -1114 5032 4639 26 0 0 0 chr2 228825866 228825892 -21861962 + AT_rich Low_complexity Low_complexity 1 26 0 191 240 40 0 chr2 228827980 228828030 -21859824 - L2 LINE L2 0 3313 3262 23 54 0 0 chr2 228828103 228828140 -21859714 + AT_rich Low_complexity Low_complexity 1 37 0 279 307 28 68 chr2 228828144 228828320 -21859534 - L2 LINE L2 -2 3311 3143 204 351 80 7 chr2 228828439 228828590 -21859264 - L2 LINE L2 -367 2947 2786 309 266 43 43 chr2 228829129 228829268 -21858586 + HAL1 LINE L1 1974 2112 -395 300 343 92 38 chr2 228829307 228829411 -21858443 + HAL1 LINE L1 2199 2296 -211 25 75 0 0 chr2 228829411 228829464 -21858390 + AT_rich Low_complexity Low_complexity 1 53 0 300 343 92 38 chr2 228829464 228829599 -21858255 + HAL1 LINE L1 2296 2506 -1 21 36 0 0 chr2 228830510 228830538 -21857316 + AT_rich Low_complexity Low_complexity 1 28 0 403 229 41 8 chr2 228830585 228830707 -21857147 - LTR67 LTR ERVL 0 557 432 205 156 0 0 chr2 228831399 228831431 -21856423 + (ATG)n Simple_repeat Simple_repeat 2 33 0 571 272 82 43 chr2 228831431 228831663 -21856191 - MIR SINE MIR 0 262 22 220 307 127 60 chr2 228831639 228831805 -21856049 + MIR SINE MIR 20 196 -66 * 233 311 97 51 chr2 228831926 228832122 -21855732 + MLT1K LTR MaLR 27 231 -357 287 299 112 28 chr2 228832280 228832494 -21855360 + MLT1K LTR MaLR 330 561 -27 545 261 127 0 chr2 228832720 228832862 -21854992 - MIR3 SINE MIR -9 199 40 792 260 18 43 chr2 228832913 228833190 -21854664 - MARNA DNA Mariner -158 428 159 206 249 20 0 chr2 228833442 228833505 -21854349 - MIR SINE MIR -44 164 100 1872 59 4 0 chr2 228833506 228833744 -21854110 + L1PA5 LINE L1 5916 6154 0 23 0 0 0 chr2 228833819 228833842 -21854012 + AT_rich Low_complexity Low_complexity 1 23 0 1890 122 0 0 chr2 228835204 228835467 -21852387 + AluSx SINE Alu 49 311 -1 284 293 100 0 chr2 228835509 228835659 -21852195 + MIR SINE MIR 84 248 -14 2502 65 0 3 chr2 228835672 228835979 -21851875 + AluY SINE Alu 1 306 -5 1823 160 7 0 chr2 228836775 228837057 -21850797 + AluJb SINE Alu 1 284 -28 24 67 0 0 chr2 228837057 228837102 -21850752 + AT_rich Low_complexity Low_complexity 1 45 0 2356 97 7 0 chr2 228837930 228838238 -21849616 - AluSx SINE Alu -2 310 1 2169 83 7 0 chr2 228838820 228839133 -21848721 - AluSc SINE Alu 0 315 1 209 343 28 14 chr2 228839365 228839508 -21848346 + L3b LINE CR1 1114 1258 -325 264 145 0 171 chr2 228842377 228842403 -21845451 + MER5A DNA MER1_type 1 30 -159 2396 89 0 0 chr2 228842403 228842705 -21845149 + AluSq SINE Alu 1 302 -11 264 145 0 171 chr2 228842705 228842754 -21845100 + MER5A DNA MER1_type 30 63 -126 292 330 87 0 chr2 228842936 228843039 -21844815 + MIR SINE MIR 12 123 -139 834 236 122 51 chr2 228844351 228844686 -21843168 + L2 LINE L2 2947 3305 -8 304 273 64 27 chr2 228844874 228844984 -21842870 + MIR3 SINE MIR 2 115 -93 1534 183 68 10 chr2 228845554 228845849 -21842005 + AluJb SINE Alu 1 312 0 409 296 77 67 chr2 228845884 228846181 -21841673 + L2 LINE L2 3014 3313 0 213 222 19 0 chr2 228846182 228846236 -21841618 + (TGAA)n Simple_repeat Simple_repeat 3 57 0 215 305 279 0 chr2 228846865 228847055 -21840799 + MIR SINE MIR 20 262 0 648 236 6 25 chr2 228847127 228847288 -21840566 - MER5B DNA MER1_type -8 170 13 25 0 0 0 chr2 228847850 228847875 -21839979 + AT_rich Low_complexity Low_complexity 1 25 0 2353 103 0 7 chr2 228847877 228848187 -21839667 + AluSx SINE Alu 1 308 -4 560 239 119 0 chr2 228848277 228848436 -21839418 - MIR SINE MIR -13 249 72 22 35 0 0 chr2 228848534 228848563 -21839291 + AT_rich Low_complexity Low_complexity 1 29 0 740 118 0 22 chr2 228848573 228848709 -21839145 - MER53 DNA DNA -56 133 1 330 289 198 0 chr2 228850897 228851018 -21836836 - MIR SINE MIR -110 152 8 251 170 21 0 chr2 228851044 228851091 -21836763 + MER5B DNA MER1_type 123 170 -8 2509 92 19 3 chr2 228851896 228852265 -21835589 - THE1C LTR MaLR 0 375 1 543 213 8 0 chr2 228852613 228852735 -21835119 + MER45A DNA AcHobo 56 178 0 686 130 23 61 chr2 228852768 228852899 -21834955 - FLAM_C SINE Alu -7 126 1 434 250 15 0 chr2 228852964 228853096 -21834758 - MER69 DNA AcHobo -9 2517 2384 571 226 139 10 chr2 228853123 228853454 -21834400 - MER69 DNA AcHobo -218 2308 1912 957 253 143 6 chr2 228853486 228853814 -21834040 - MER69 DNA AcHobo -834 392 20 219 69 0 0 chr2 228854080 228854109 -21833745 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 245 143 0 0 chr2 228856621 228856656 -21831198 - MIR SINE MIR -6 256 222 319 315 56 35 chr2 228857074 228857271 -21830583 - MLT1J LTR MaLR -200 311 111 284 197 53 0 chr2 228858451 228858527 -21829327 + MER112 DNA MER1_type 134 213 -47 199 352 42 33 chr2 228859169 228859325 -21828529 + MIR SINE MIR 30 181 -81 434 312 23 35 chr2 228860456 228860629 -21827225 - MIR SINE MIR 0 262 92 472 294 85 40 chr2 228860694 228860895 -21826959 + MIR SINE MIR 21 230 -32 704 228 31 45 chr2 228861519 228861808 -21826046 - MER33 DNA MER1_type -22 302 18 313 333 54 16 chr2 228862117 228862246 -21825608 + MIR SINE MIR 77 210 -52 258 56 0 0 chr2 228866257 228866293 -21821561 + (T)n Simple_repeat Simple_repeat 1 36 0 465 349 56 15 chr2 228866314 228866583 -21821271 - L2 LINE L2 -7 3306 3027 2175 106 0 0 chr2 228866939 228867251 -21820603 - AluY SINE Alu 0 312 1 315 233 27 0 chr2 228867408 228867481 -21820373 - MER58 DNA MER1_type -3 2417 2343 678 25 0 0 chr2 228867482 228867562 -21820292 + (TTC)n Simple_repeat Simple_repeat 2 81 0 457 253 0 0 chr2 228867572 228867667 -21820187 - MER58 DNA MER1_type -120 95 1 2310 106 0 6 chr2 228867775 228868087 -21819767 + AluY SINE Alu 1 310 -1 856 166 0 2 chr2 228868271 228868512 -21819342 + AluJ SINE Alu 4 303 -9 544 210 24 40 chr2 228868514 228868638 -21819216 + MER5B DNA MER1_type 57 178 0 3226 77 25 0 chr2 228868642 228869084 -21818770 + L1PA8 LINE L1 5718 6170 -2 578 266 7 7 chr2 228869099 228869238 -21818616 - MER5A DNA MER1_type -50 139 1 1986 126 60 30 chr2 228869612 228869976 -21817878 + THE1C LTR MaLR 1 375 0 512 225 113 83 chr2 228870236 228870298 -21817556 + MER5A DNA MER1_type 4 63 -126 1128 200 36 36 chr2 228870298 228870573 -21817281 + ORSL DNA AcHobo 1 275 0 512 225 113 83 chr2 228870573 228870690 -21817164 + MER5A DNA MER1_type 63 189 0 3320 212 25 8 chr2 228871405 228872575 -21815279 + L1MC2 LINE L1 4978 6154 -11 1608 176 29 68 chr2 228872599 228873008 -21814846 + L1MC2 LINE L1 5944 6336 -8 230 332 82 50 chr2 228873245 228873383 -21814471 - MIR SINE MIR -27 235 86 2036 133 19 33 chr2 228873383 228873743 -21814111 - THE1A LTR MaLR 0 355 1 230 332 82 50 chr2 228873743 228873824 -21814030 - MIR SINE MIR -176 86 9 361 278 135 39 chr2 228874419 228874597 -21813257 - MIR SINE MIR 0 262 56 1688 188 13 3 chr2 228874597 228874900 -21812954 + AluJb SINE Alu 1 306 -6 361 278 135 39 chr2 228874900 228874951 -21812903 - MIR SINE MIR -206 56 11 642 300 41 9 chr2 228875292 228875512 -21812342 + MIR SINE MIR 7 233 -29 216 0 0 0 chr2 228878308 228878332 -21809522 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2010 165 0 13 chr2 228878731 228879225 -21808629 + AluSx SINE Alu 1 312 0 204 289 0 0 chr2 228879325 228879377 -21808477 - MIR SINE MIR -113 149 98 237 108 0 0 chr2 228880313 228880350 -21807504 + (C)n Simple_repeat Simple_repeat 1 37 0 2010 137 7 0 chr2 228880425 228880725 -21807129 + AluSc SINE Alu 1 302 -7 245 277 229 30 chr2 228881026 228881192 -21806662 + MIR SINE MIR 54 252 -10 193 49 0 73 chr2 228881789 228881810 -21806044 + (GAAAA)n Simple_repeat Simple_repeat 1 19 -19 2545 61 0 6 chr2 228881810 228882123 -21805731 + AluY SINE Alu 1 311 0 193 49 0 73 chr2 228882123 228882142 -21805712 + (GAAAA)n Simple_repeat Simple_repeat 19 38 0 1944 113 18 0 chr2 228883617 228883900 -21803954 + L1PA13 LINE L1 5875 6162 -1 2016 114 4 0 chr2 228883909 228884180 -21803674 + AluSx SINE Alu 1 272 -40 319 16 78 16 chr2 228884180 228884244 -21803610 + (TAAA)n Simple_repeat Simple_repeat 4 71 0 760 210 7 0 chr2 228884513 228884650 -21803204 - MLT1F LTR MaLR 0 542 405 302 113 16 81 chr2 228884650 228884712 -21803142 - MLT2A1 LTR ERVL 0 444 387 23 120 0 0 chr2 228884712 228884854 -21803000 + AT_rich Low_complexity Low_complexity 1 142 0 2833 84 36 8 chr2 228884858 228885249 -21802605 - MLT2A1 LTR ERVL -40 404 3 1160 276 84 42 chr2 228885252 228885635 -21802219 - MLT1E LTR MaLR -132 461 57 2244 124 0 0 chr2 228885635 228885941 -21801913 + AluSq SINE Alu 1 306 -7 1160 276 84 42 chr2 228885941 228885984 -21801870 - MLT1E LTR MaLR -536 57 17 1056 221 5 5 chr2 228886236 228886440 -21801414 + MER3 DNA MER1_type 5 208 -1 213 258 159 76 chr2 228886490 228886622 -21801232 + MIR3 SINE MIR 14 156 -52 425 325 41 24 chr2 228886647 228886775 -21801079 + L2 LINE L2 1805 1929 -1385 2020 120 28 3 chr2 228886775 228887059 -21800795 - AluSx SINE Alu -21 291 1 425 325 41 24 chr2 228887059 228887225 -21800629 + L2 LINE L2 1929 2104 -1210 678 294 171 38 chr2 228887256 228887946 -21799908 + L2 LINE L2 2510 3313 0 291 283 33 33 chr2 228889275 228889367 -21798487 + MIR SINE MIR 81 172 -90 217 286 0 0 chr2 228889992 228890048 -21797806 + CT-rich Low_complexity Low_complexity 3 58 0 2300 101 0 0 chr2 228890198 228890494 -21797360 + AluSc SINE Alu 1 296 -13 1729 192 0 0 chr2 228890783 228891074 -21796780 - AluJb SINE Alu -21 291 1 475 298 64 11 chr2 228892340 228892528 -21795326 - MIR SINE MIR -36 226 29 245 183 17 0 chr2 228893385 228893445 -21794409 + (TA)n Simple_repeat Simple_repeat 2 62 0 200 308 43 34 chr2 228894031 228894148 -21793706 - MIR3 SINE MIR -6 202 85 25 0 0 0 chr2 228895370 228895395 -21792459 + AT_rich Low_complexity Low_complexity 1 25 0 2195 150 33 28 chr2 228896214 228896574 -21791280 - THE1B LTR MaLR 0 364 3 444 283 139 0 chr2 228899086 228899252 -21788602 + MIR SINE MIR 71 259 -3 2287 117 0 0 chr2 228899461 228899761 -21788093 - AluSg SINE Alu -10 300 1 318 266 14 79 chr2 228899768 228899907 -21787947 - MIR SINE MIR -51 211 82 654 222 193 0 chr2 228901203 228901379 -21786475 + MER63A DNA MER1_type 1 210 0 1880 108 4 0 chr2 228903483 228903733 -21784121 - AluSx SINE Alu -23 289 39 393 312 92 51 chr2 228904269 228904564 -21783290 + L2 LINE L2 2449 2755 -559 730 313 69 42 chr2 228904597 228905047 -21782807 + L2 LINE L2 2844 3305 -8 2303 109 0 0 chr2 228905287 228905581 -21782273 + AluSx SINE Alu 1 294 -18 1898 139 51 0 chr2 228905697 228905991 -21781863 + AluSx SINE Alu 1 309 -3 452 340 48 29 chr2 228909587 228909796 -21778058 + L3 LINE CR1 1006 1218 -359 244 111 44 0 chr2 228910434 228910479 -21777375 + U5 snRNA snRNA 1 47 -69 432 225 0 0 chr2 228910525 228910614 -21777240 + MER103 DNA DNA 3 91 -75 448 253 0 0 chr2 228910983 228911066 -21776788 + FLAM_A SINE Alu 1 83 -59 1607 190 11 0 chr2 228912341 228912620 -21775234 - AluJo SINE Alu -30 282 1 1866 142 7 11 chr2 228914638 228914919 -21772935 + AluSx SINE Alu 1 280 -32 267 31 0 0 chr2 228914919 228914951 -21772903 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 246 207 35 0 chr2 228915274 228915332 -21772522 + MIR SINE MIR 87 146 -116 693 339 98 9 chr2 228915995 228916446 -21771408 - L2 LINE L2 -671 2643 2153 296 257 77 73 chr2 228916699 228916882 -21770972 + L1MC/D LINE L1 5693 5882 -301 22 35 0 0 chr2 228916882 228916911 -21770943 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr2 228917064 228917094 -21770760 + AT_rich Low_complexity Low_complexity 1 30 0 212 283 50 0 chr2 228917131 228917191 -21770663 - MIR SINE MIR 0 262 200 183 80 0 0 chr2 228917982 228918007 -21769847 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 23 33 0 0 chr2 228919028 228919058 -21768796 + AT_rich Low_complexity Low_complexity 1 30 0 2358 103 3 0 chr2 228919304 228919615 -21768239 - AluSx SINE Alu 0 312 1 1259 143 25 0 chr2 228920228 228920424 -21767430 + MER2 DNA MER2_type 2 202 -143 416 150 57 42 chr2 228922085 228922425 -21765429 + (TTATA)n Simple_repeat Simple_repeat 1 345 0 194 148 56 49 chr2 228922438 228922600 -21765254 + (TTATA)n Simple_repeat Simple_repeat 1 163 0 338 154 46 24 chr2 228922642 228923026 -21764828 + (TTATA)n Simple_repeat Simple_repeat 1 392 0 254 200 32 32 chr2 228922948 228923073 -21764781 + (TATAA)n Simple_repeat Simple_repeat 4 128 0 * 779 269 109 0 chr2 228923118 228923319 -21764535 - MER58A DNA MER1_type -1 223 1 2322 108 0 7 chr2 228923935 228924242 -21763612 + AluSc SINE Alu 1 305 -4 7321 10 2 0 chr2 228924362 228925176 -21762678 - L1PA2 LINE L1 -5 6150 5335 2135 100 13 23 chr2 228925560 228925861 -21761993 - AluSx SINE Alu -1 311 14 2714 247 28 14 chr2 228925868 228926585 -21761269 - L1ME1 LINE L1 -15 6151 5425 22 35 0 0 chr2 228926585 228926614 -21761240 + AT_rich Low_complexity Low_complexity 1 29 0 189 304 159 2 chr2 228929537 228929633 -21758221 + MIR SINE MIR 42 149 -70 198 0 0 0 chr2 228929926 228929948 -21757906 + (T)n Simple_repeat Simple_repeat 1 22 0 185 0 40 0 chr2 228931590 228931615 -21756239 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 333 118 0 0 chr2 228931736 228931787 -21756067 + L1PA7 LINE L1 6097 6147 -7 255 271 169 68 chr2 228932108 228932315 -21755539 + MIR SINE MIR 3 230 -32 248 308 35 29 chr2 228932645 228932817 -21755037 + MER69A DNA AcHobo 2 174 -3 392 299 14 0 chr2 228933062 228933206 -21754648 - L1ME3A LINE L1 -13 6157 6012 239 276 67 0 chr2 228933230 228933335 -21754519 - L1MC4 LINE L1 -1 8041 7930 4323 103 11 23 chr2 228933397 228934039 -21753815 + MER51A LTR ERV1 1 634 0 337 236 151 27 chr2 228934071 228934296 -21753558 - L1MC4 LINE L1 -190 7852 7600 3577 180 50 45 chr2 228934448 228934552 -21753302 - MER45R DNA AcHobo 0 1581 1479 1659 191 3 17 chr2 228934552 228934845 -21753009 + AluJb SINE Alu 6 294 -18 3577 180 50 45 chr2 228934845 228935690 -21752164 - MER45R DNA AcHobo -102 1479 628 203 176 0 0 chr2 228935694 228935728 -21752126 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1218 125 83 0 chr2 228935759 228935951 -21751903 - L1PA10 LINE L1 -14 6154 5947 21 0 0 0 chr2 228936587 228936608 -21751246 + AT_rich Low_complexity Low_complexity 1 21 0 493 321 102 0 chr2 228936661 228936848 -21751006 - MIR SINE MIR -21 241 36 727 301 18 9 chr2 228937053 228937282 -21750572 + MIR SINE MIR 31 261 -1 2788 216 79 34 chr2 228937945 228938797 -21749057 + MER97a DNA MER1_type 2 891 -3 1401 197 56 0 chr2 228938869 228939153 -21748701 + MLT2B2 LTR ERVL 1 300 -215 1794 326 91 19 chr2 228940506 228941388 -21746466 + L2 LINE L2 88 1032 -2282 1958 202 86 24 chr2 228941388 228941754 -21746100 - MLT1F1 LTR MaLR -71 496 95 2040 131 13 19 chr2 228941754 228942068 -21745786 + AluSq SINE Alu 1 312 -1 1958 202 86 24 chr2 228942068 228942156 -21745698 - MLT1F1 LTR MaLR -472 95 14 219 318 0 0 chr2 228942168 228942231 -21745623 - MIR SINE MIR -119 143 81 849 263 48 20 chr2 228942286 228942600 -21745254 - MLT1J1 LTR MaLR -131 319 1 234 204 19 19 chr2 228943510 228943564 -21744290 + MLT1H LTR MaLR 109 162 -387 551 178 19 0 chr2 228945687 228945794 -21742060 + MER6 DNA MER2_type 380 488 -377 4249 161 23 22 chr2 228945798 228947253 -21740601 - L1MA4 LINE L1 -235 6065 4618 837 182 5 30 chr2 228947250 228947448 -21740406 + L1MA4 LINE L1 4435 4627 -1519 * 480 139 0 0 chr2 228947575 228947654 -21740200 + (GAA)n Simple_repeat Simple_repeat 2 80 0 2061 127 0 0 chr2 228947691 228947974 -21739880 - AluSc SINE Alu -26 283 1 186 279 202 16 chr2 228948479 228948608 -21739246 - MIR3 SINE MIR -16 192 40 304 327 48 18 chr2 228948996 228949164 -21738690 + MIR SINE MIR 31 203 -59 276 111 0 0 chr2 228950154 228950199 -21737655 + (CA)n Simple_repeat Simple_repeat 1 45 0 221 365 209 0 chr2 228950614 228950762 -21737092 - MIR SINE MIR -64 198 20 1650 191 16 19 chr2 228950940 228951249 -21736605 - AluJb SINE Alu -4 308 1 261 0 0 0 chr2 228951305 228951334 -21736520 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 371 353 112 45 chr2 228951338 228951695 -21736159 - L2 LINE L2 -8 3264 2884 203 299 75 86 chr2 228951704 228951727 -21736127 + MIR SINE MIR 90 112 -150 1855 161 41 19 chr2 228951727 228952094 -21735760 - THE1C LTR MaLR 0 375 1 203 299 75 86 chr2 228952094 228952244 -21735610 + MIR SINE MIR 112 261 -1 508 253 35 52 chr2 228952486 228952660 -21735194 + MER63A DNA MER1_type 40 210 0 2478 81 0 0 chr2 228953170 228953516 -21734338 + AluY SINE Alu 1 346 0 414 214 52 65 chr2 228955087 228955241 -21732613 + MER103 DNA DNA 12 163 -3 429 290 25 37 chr2 228955432 228955594 -21732260 - MIR SINE MIR -46 216 57 384 292 117 0 chr2 228956163 228956300 -21731554 + MIR SINE MIR 2 154 -108 248 331 23 15 chr2 228956960 228957090 -21730764 + MLT1J2 LTR MaLR 73 203 -247 400 284 40 20 chr2 228957142 228957290 -21730564 + MLT1J2 LTR MaLR 285 435 -15 1150 176 0 0 chr2 228957370 228957563 -21730291 + L1PB4 LINE L1 5952 6144 -12 2167 125 0 0 chr2 228957569 228957865 -21729989 + AluSx SINE Alu 1 296 -16 486 302 153 0 chr2 228958581 228958770 -21729084 - MIR SINE MIR -4 258 41 195 204 0 0 chr2 228960874 228960928 -21726926 + (CA)n Simple_repeat Simple_repeat 2 55 0 590 247 56 19 chr2 228961713 228961875 -21725979 - MIR SINE MIR -87 175 8 2518 54 3 10 chr2 228961966 228962279 -21725575 + AluY SINE Alu 1 311 0 973 191 0 6 chr2 228962907 228963075 -21724779 + AluJo SINE Alu 1 167 -145 282 254 115 39 chr2 228964166 228964296 -21723558 - MIR SINE MIR -102 160 21 1994 125 11 4 chr2 228964785 228965091 -21722763 + AluSx SINE Alu 3 310 0 23 33 0 0 chr2 228968810 228968840 -21719014 + AT_rich Low_complexity Low_complexity 1 30 0 220 305 45 91 chr2 228969576 228969730 -21718124 - MIR3 SINE MIR -20 188 42 23 54 0 0 chr2 228971735 228971772 -21716082 + AT_rich Low_complexity Low_complexity 1 37 0 241 145 32 0 chr2 228973062 228973124 -21714730 + (TA)n Simple_repeat Simple_repeat 1 64 0 1232 128 0 0 chr2 228973596 228973768 -21714086 - AluSg/x SINE Alu -15 297 126 2390 79 0 3 chr2 228973768 228974073 -21713781 - AluSg SINE Alu -6 304 1 246 239 9 55 chr2 228976846 228976955 -21710899 + A-rich Low_complexity Low_complexity 2 105 0 2047 115 0 45 chr2 228978582 228978894 -21708960 + AluSq SINE Alu 4 301 -12 180 77 0 0 chr2 228979342 228979368 -21708486 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1968 147 10 0 chr2 228979455 228979755 -21708099 + AluSx SINE Alu 1 303 -9 300 163 33 54 chr2 228979944 228980036 -21707818 - L1M4 LINE L1 -970 5176 5087 997 129 7 32 chr2 228980271 228980426 -21707428 + AluSg/x SINE Alu 111 261 -49 1157 137 0 11 chr2 228980427 228980602 -21707252 - FRAM SINE Alu -4 172 1 567 247 92 11 chr2 228981665 228981839 -21706015 - MIR SINE MIR -42 220 33 521 237 85 17 chr2 228981841 228982018 -21705836 + MER5A DNA MER1_type 1 189 0 243 88 0 0 chr2 228982129 228982163 -21705691 + (T)n Simple_repeat Simple_repeat 1 34 0 248 200 0 0 chr2 228982205 228982250 -21705604 - FRAM SINE Alu -34 4294967292 1 528 88 12 0 chr2 228982255 228982335 -21705519 + LTR1B LTR ERV1 1 81 -745 1128 174 127 70 chr2 228982351 228982784 -21705070 + LTR1B LTR ERV1 332 785 0 595 178 0 0 chr2 228982784 228982874 -21704980 - FRAM/FAM SINE Alu -86 90 1 624 276 72 27 chr2 228984017 228984238 -21703616 - MIR SINE MIR 0 262 32 2176 138 0 0 chr2 228985694 228986006 -21701848 - AluSx SINE Alu 0 312 1 750 196 101 0 chr2 228986024 228986213 -21701641 - MER3 DNA MER1_type 0 209 2 2316 83 0 3 chr2 228986256 228986558 -21701296 + AluY SINE Alu 1 301 -10 24 32 0 0 chr2 228986953 228986984 -21700870 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 228987131 228987152 -21700702 + AT_rich Low_complexity Low_complexity 1 21 0 268 250 213 15 chr2 228987222 228987358 -21700496 - MIR SINE MIR -98 164 2 32 0 0 0 chr2 228987382 228987414 -21700440 + AT_rich Low_complexity Low_complexity 1 32 0 252 200 0 0 chr2 228987468 228987523 -21700331 + (TA)n Simple_repeat Simple_repeat 1 55 0 2056 122 7 3 chr2 228988770 228989090 -21698764 - AluSq SINE Alu 0 321 1 751 101 0 0 chr2 228991127 228991226 -21696628 + AluSq/x SINE Alu 53 151 -162 367 321 9 0 chr2 228991496 228991602 -21696252 + MIR SINE MIR 32 138 -70 303 232 48 16 chr2 228991623 228991748 -21696106 + MER113 DNA MER1_type? 81 209 -312 2012 141 0 0 chr2 228991880 228992164 -21695690 + AluSx SINE Alu 1 284 -28 228 153 51 34 chr2 228992996 228993055 -21694799 + MER113 DNA MER1_type? 336 395 -126 2259 92 0 14 chr2 228994843 228995138 -21692716 + AluSx SINE Alu 1 291 -21 226 244 67 56 chr2 228995379 228995469 -21692385 + MIR SINE MIR 61 151 -57 385 269 156 21 chr2 228995965 228996151 -21691703 - MIR SINE MIR -5 257 47 470 226 0 8 chr2 228998660 228998793 -21689061 + GA-rich Low_complexity Low_complexity 2 133 0 189 0 0 0 chr2 229000236 229000257 -21687597 + (CA)n Simple_repeat Simple_repeat 1 21 0 261 98 0 0 chr2 229000498 229000539 -21687315 + (CA)n Simple_repeat Simple_repeat 2 42 0 775 273 119 8 chr2 229001772 229002241 -21685613 + MER113 DNA MER1_type? 1 521 0 488 231 37 49 chr2 229006475 229006694 -21681160 + MLT1J2 LTR MaLR 39 257 -189 243 200 10 100 chr2 229006690 229006790 -21681064 + MLT1J1 LTR MaLR 318 408 -38 * 420 316 113 0 chr2 229007378 229007546 -21680308 - MIR SINE MIR -71 191 5 944 264 61 4 chr2 229007569 229007800 -21680054 - MIR SINE MIR -6 256 13 313 258 48 24 chr2 229008182 229008306 -21679548 + L1ME3A LINE L1 6044 6170 0 297 135 0 0 chr2 229011257 229011309 -21676545 + (GA)n Simple_repeat Simple_repeat 1 52 0 26 0 0 0 chr2 229011916 229011942 -21675912 + AT_rich Low_complexity Low_complexity 1 26 0 186 43 0 0 chr2 229012169 229012192 -21675662 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 24 32 0 0 chr2 229013238 229013269 -21674585 + AT_rich Low_complexity Low_complexity 1 31 0 201 74 0 0 chr2 229014494 229014521 -21673333 + (A)n Simple_repeat Simple_repeat 1 27 0 1917 153 0 7 chr2 229015829 229016117 -21671737 - AluSx SINE Alu -26 286 1 1105 261 37 3 chr2 229016505 229016831 -21671023 - MER58B DNA MER1_type -4 337 1 1528 144 8 8 chr2 229016883 229017126 -21670728 + AluSx SINE Alu 1 243 -69 272 230 48 95 chr2 229017446 229017572 -21670282 + MER69A DNA AcHobo 54 173 -4 266 0 29 0 chr2 229017988 229018022 -21669832 + (TTA)n Simple_repeat Simple_repeat 2 36 0 659 181 147 73 chr2 229018332 229018536 -21669318 - MER20 DNA MER1_type 0 219 1 228 250 19 0 chr2 229018755 229018807 -21669047 - MIR3 SINE MIR -6 202 150 216 200 0 0 chr2 229019665 229019710 -21668144 + (CCTG)n Simple_repeat Simple_repeat 4 48 0 213 39 0 0 chr2 229020987 229021013 -21666841 + (CACCC)n Simple_repeat Simple_repeat 1 26 0 2187 101 0 14 chr2 229022332 229022620 -21665234 + AluSg SINE Alu 17 300 -10 1429 160 0 25 chr2 229022919 229023157 -21664697 - AluJb SINE Alu -80 232 1 30 0 0 0 chr2 229024375 229024405 -21663449 + AT_rich Low_complexity Low_complexity 1 30 0 324 0 0 0 chr2 229024447 229024483 -21663371 + (TG)n Simple_repeat Simple_repeat 1 36 0 1666 149 65 0 chr2 229024483 229024745 -21663109 - AluSx SINE Alu -33 279 1 208 333 53 0 chr2 229025518 229025593 -21662261 + L2 LINE L2 3193 3271 -1 442 352 15 20 chr2 229025596 229025792 -21662062 - MIR3 SINE MIR -4 204 10 2152 87 14 24 chr2 229027394 229027723 -21660131 + AluSx SINE Alu 1 326 0 314 159 130 0 chr2 229028582 229028651 -21659203 - MADE1 DNA Mariner 0 80 3 844 204 9 64 chr2 229028932 229029152 -21658702 - MER58A DNA MER1_type 0 224 17 231 170 0 0 chr2 229029897 229029944 -21657910 + (CATAT)n Simple_repeat Simple_repeat 3 49 0 534 298 25 19 chr2 229030839 229030997 -21656857 + L2 LINE L2 3155 3313 0 1805 189 0 10 chr2 229031063 229031365 -21656489 + AluJb SINE Alu 1 299 -13 180 0 0 0 chr2 229031407 229031427 -21656427 + (TAA)n Simple_repeat Simple_repeat 2 21 0 195 129 0 0 chr2 229031461 229031492 -21656362 + (A)n Simple_repeat Simple_repeat 1 31 0 770 192 86 0 chr2 229033072 229033223 -21654631 + AluSg/x SINE Alu 137 300 -12 210 162 0 0 chr2 229034645 229034682 -21653172 + A-rich Low_complexity Low_complexity 1 37 0 2137 129 0 10 chr2 229035525 229035834 -21652020 + AluSx SINE Alu 2 307 -5 207 0 0 0 chr2 229036204 229036227 -21651627 + (A)n Simple_repeat Simple_repeat 1 23 0 338 200 40 0 chr2 229036595 229036670 -21651184 + MER5A DNA MER1_type 25 102 -87 739 251 72 0 chr2 229037424 229037619 -21650235 + MER3 DNA MER1_type 1 209 0 2287 105 0 3 chr2 229037828 229038124 -21649730 + AluSq SINE Alu 1 295 -18 259 304 96 17 chr2 229038140 229038255 -21649599 + MER5B DNA MER1_type 5 128 -50 367 271 117 37 chr2 229038370 229038558 -21649296 - MIR SINE MIR -6 256 54 1955 131 24 14 chr2 229038659 229038956 -21648898 + AluSx SINE Alu 1 300 -12 1092 177 0 0 chr2 229039807 229039982 -21647872 - AluJb SINE Alu -3 309 134 2085 129 10 10 chr2 229039982 229040292 -21647562 - AluSx SINE Alu -2 310 1 281 92 0 53 chr2 229040395 229040471 -21647383 + (TAAAA)n Simple_repeat Simple_repeat 4 75 0 349 236 97 42 chr2 229040513 229040657 -21647197 + MIR SINE MIR 83 234 -28 378 0 0 0 chr2 229040918 229040960 -21646894 + (TA)n Simple_repeat Simple_repeat 2 43 0 2313 97 3 0 chr2 229040960 229041259 -21646595 - AluSq SINE Alu -13 300 1 253 247 124 0 chr2 229041326 229041423 -21646431 - MIR SINE MIR -74 188 80 525 339 83 4 chr2 229042641 229042871 -21644983 - MIR SINE MIR -9 253 6 195 42 0 0 chr2 229045548 229045572 -21642282 + (GGA)n Simple_repeat Simple_repeat 1 24 0 225 0 0 0 chr2 229045743 229045768 -21642086 + (TA)n Simple_repeat Simple_repeat 2 26 0 537 245 86 33 chr2 229045921 229046072 -21641782 - MIR SINE MIR -56 206 48 1040 197 77 32 chr2 229046297 229046521 -21641333 + MER33 DNA MER1_type 1 245 -2340 2106 114 7 4 chr2 229046521 229046825 -21641029 - AluSq SINE Alu 0 307 3 1040 197 77 32 chr2 229046825 229046909 -21640945 + MER33 DNA MER1_type 245 324 0 216 204 74 0 chr2 229047636 229047690 -21640164 - MIR SINE MIR -116 146 89 1383 194 87 14 chr2 229047951 229048307 -21639547 - MER58D DNA MER1_type 0 386 5 660 179 56 118 chr2 229049113 229049308 -21638546 - MER5A DNA MER1_type -6 183 1 2118 128 3 3 chr2 229049500 229049805 -21638049 + AluSx SINE Alu 1 305 -7 22 0 0 0 chr2 229049837 229049859 -21637995 + AT_rich Low_complexity Low_complexity 1 22 0 2217 101 3 0 chr2 229050250 229050538 -21637316 + AluSp SINE Alu 1 289 -24 416 301 92 46 chr2 229051035 229051188 -21636666 + MIR SINE MIR 4 163 -45 2382 105 11 86 chr2 229052417 229052873 -21634981 + MER57B LTR ERV1 1 422 -12 2267 104 3 0 chr2 229056299 229056598 -21631256 - AluSp SINE Alu -13 300 1 1758 166 3 17 chr2 229056743 229057038 -21630816 + AluJb SINE Alu 11 301 -11 2134 114 10 0 chr2 229057556 229057855 -21629999 - AluSx SINE Alu -10 302 1 181 298 167 65 chr2 229058211 229058379 -21629475 - L2 LINE L2 -1 3271 3087 418 307 217 3 chr2 229058432 229058764 -21629090 - L2 LINE L2 -340 2974 2572 576 60 0 48 chr2 229060772 229060856 -21626998 + MADE1 DNA Mariner 1 80 0 270 0 0 0 chr2 229061710 229061740 -21626114 + (CA)n Simple_repeat Simple_repeat 1 30 0 251 93 23 0 chr2 229061740 229061783 -21626071 + (GA)n Simple_repeat Simple_repeat 1 44 0 279 248 20 116 chr2 229112521 229112719 -21575135 - L2 LINE L2 0 3313 3135 2145 130 0 0 chr2 229112946 229113246 -21574608 + AluSg SINE Alu 1 300 -10 598 174 14 0 chr2 229114314 229114452 -21573402 + (TG)n Simple_repeat Simple_repeat 1 140 0 908 151 6 0 chr2 229114665 229114844 -21573010 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 1308 79 0 0 chr2 229118571 229118601 -21569253 + (TTCTCC)n Simple_repeat Simple_repeat 1 208 0 1308 79 0 0 chr2 229118601 229118779 -21569075 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 216 0 0 0 chr2 229120704 229120728 -21567126 + (T)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr2 229123723 229123744 -21564110 + AT_rich Low_complexity Low_complexity 1 21 0 190 70 0 70 chr2 229124151 229124194 -21563660 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 2446 46 0 0 chr2 229124342 229124655 -21563199 - AluY SINE Alu 0 313 1 415 276 26 17 chr2 229124807 229124923 -21562931 + MIR SINE MIR 69 185 -77 21 0 0 0 chr2 229126026 229126047 -21561807 + AT_rich Low_complexity Low_complexity 1 21 0 824 121 21 71 chr2 229126047 229126187 -21561667 - FLAM_C SINE Alu 0 133 1 234 136 0 0 chr2 229127293 229127337 -21560517 + (CA)n Simple_repeat Simple_repeat 1 44 0 253 312 28 21 chr2 229127482 229127623 -21560231 - L1MC/D LINE L1 -1944 5864 5723 196 343 94 22 chr2 229128033 229128214 -21559640 + MIR SINE MIR 69 262 0 2090 159 65 65 chr2 229128438 229128627 -21559227 + Charlie1b DNA MER1_type 3 191 -2570 1395 159 104 64 chr2 229128627 229128953 -21558901 - MER44D DNA MER2_type 0 609 1 2090 159 65 65 chr2 229128953 229129015 -21558839 + Charlie1b DNA MER1_type 191 252 -2509 1923 122 30 49 chr2 229129015 229129319 -21558535 + AluSg SINE Alu 1 298 -12 2090 159 65 65 chr2 229129319 229129587 -21558267 + Charlie1b DNA MER1_type 251 523 0 398 323 92 15 chr2 229135395 229135590 -21552264 + MIR SINE MIR 18 227 -35 1873 168 0 10 chr2 229135616 229135925 -21551929 - AluJb SINE Alu -6 306 1 22 0 0 0 chr2 229135935 229135957 -21551897 + AT_rich Low_complexity Low_complexity 1 22 0 1759 135 7 0 chr2 229136602 229136884 -21550970 - L1PB1 LINE L1 -8 6143 5860 1813 89 0 0 chr2 229137042 229137277 -21550577 + AluSc SINE Alu 65 299 -10 1805 167 0 20 chr2 229137872 229138172 -21549682 - AluJb SINE Alu -8 304 11 1186 109 0 0 chr2 229139282 229139438 -21548416 - AluSq SINE Alu -11 302 147 285 54 0 0 chr2 229139438 229139475 -21548379 - AluSq SINE Alu -120 183 147 1541 83 14 37 chr2 229139476 229139693 -21548161 - AluSq SINE Alu -99 214 3 225 0 0 0 chr2 229142156 229142181 -21545673 + (CA)n Simple_repeat Simple_repeat 1 25 0 448 254 25 8 chr2 229143935 229144053 -21543801 + MIR SINE MIR 117 236 -26 23 54 0 0 chr2 229144146 229144183 -21543671 + AT_rich Low_complexity Low_complexity 1 37 0 4291 146 20 14 chr2 229144251 229144535 -21543319 - L1MA7 LINE L1 0 6291 6010 2283 115 0 0 chr2 229144535 229144839 -21543015 - AluSx SINE Alu -8 304 1 4291 146 20 14 chr2 229144839 229145333 -21542521 - L1MA7 LINE L1 -281 6010 5508 183 294 259 0 chr2 229145761 229145846 -21542008 + MIR3 SINE MIR 83 189 -19 22 0 0 0 chr2 229146045 229146067 -21541787 + AT_rich Low_complexity Low_complexity 1 22 0 2327 104 0 0 chr2 229147863 229148162 -21539692 + AluSg SINE Alu 1 299 -11 341 301 38 136 chr2 229148350 229148604 -21539250 + L3 LINE CR1 82 275 -1302 2282 102 0 10 chr2 229148604 229148907 -21538947 - AluSx SINE Alu -12 300 1 341 301 38 136 chr2 229148907 229149101 -21538753 + L3 LINE CR1 275 486 -1091 1867 312 71 40 chr2 229149101 229149802 -21538052 + L3 LINE CR1 626 1363 -214 635 200 64 0 chr2 229149802 229149927 -21537927 - FLAM_A SINE Alu 0 133 1 1867 312 71 40 chr2 229149927 229150122 -21537732 + L3 LINE CR1 1363 1550 -27 1266 179 21 49 chr2 229150280 229150609 -21537245 - MER33 DNA MER1_type 0 324 5 279 0 0 0 chr2 229151618 229151649 -21536205 + (TG)n Simple_repeat Simple_repeat 2 32 0 2205 117 0 29 chr2 229151838 229152154 -21535700 + AluSq SINE Alu 1 307 -6 25 31 0 0 chr2 229152592 229152624 -21535230 + AT_rich Low_complexity Low_complexity 1 32 0 536 229 290 6 chr2 229152711 229152894 -21534960 - MIR SINE MIR 0 262 28 1965 138 6 31 chr2 229153440 229153758 -21534096 - AluSx SINE Alu 0 312 3 682 151 63 121 chr2 229153820 229154026 -21533828 - MER20 DNA MER1_type -25 194 1 249 57 0 0 chr2 229154137 229154172 -21533682 + (GA)n Simple_repeat Simple_repeat 2 36 0 1994 157 3 0 chr2 229154472 229154777 -21533077 + AluSx SINE Alu 1 306 -6 2049 137 3 0 chr2 229155108 229155408 -21532446 - AluJb SINE Alu -11 301 1 2215 115 7 0 chr2 229155573 229155877 -21531977 + AluSp SINE Alu 1 306 -7 31 0 0 0 chr2 229156446 229156477 -21531377 + AT_rich Low_complexity Low_complexity 1 31 0 792 244 61 9 chr2 229157036 229157592 -21530262 - L1M2 LINE L1 -4070 3496 2895 8555 108 7 0 chr2 229157594 229158831 -21529023 - THE1B-int LTR MaLR -334 1246 1 2117 159 5 27 chr2 229158831 229159203 -21528651 - THE1B LTR MaLR 0 364 1 5852 172 51 43 chr2 229159203 229161164 -21526690 + L1MA4 LINE L1 3967 5951 -349 1644 209 3 7 chr2 229161164 229161460 -21526394 + AluJo SINE Alu 1 295 -17 5852 172 51 43 chr2 229161460 229161735 -21526119 + L1MA4 LINE L1 5951 6222 -78 306 300 0 22 chr2 229162858 229162948 -21524906 - L2 LINE L2 -35 3237 3150 2338 205 75 6 chr2 229162967 229163490 -21524364 - MER89 LTR ERV1 0 559 1 468 114 0 25 chr2 229163535 229163614 -21524240 - L1PA5 LINE L1 -2 6152 6076 956 80 22 0 chr2 229163621 229163759 -21524095 + L1PA6 LINE L1 5928 6068 -86 610 339 42 8 chr2 229163834 229164073 -21523781 - MIR SINE MIR 0 262 16 243 400 60 37 chr2 229167875 229168277 -21519577 - L2 LINE L2 -350 2964 2554 597 270 73 22 chr2 229168681 229168859 -21518995 + MIR SINE MIR 32 218 -44 694 283 138 35 chr2 229169034 229169469 -21518385 - L2 LINE L2 0 3313 2834 1001 169 95 78 chr2 229169534 229169830 -21518024 - MER33 DNA MER1_type -22 302 2 241 333 0 0 chr2 229169842 229169923 -21517931 - L2 LINE L2 -508 2806 2726 21 0 0 0 chr2 229170164 229170185 -21517669 + AT_rich Low_complexity Low_complexity 1 21 0 353 284 187 0 chr2 229170881 229171036 -21516818 + MER5A DNA MER1_type 4 187 -2 325 314 99 50 chr2 229171127 229171369 -21516485 - L2 LINE L2 -27 3245 2992 275 221 26 39 chr2 229172960 229173037 -21514817 + MIR SINE MIR 81 156 -106 365 352 103 33 chr2 229173403 229173843 -21514011 - L2 LINE L2 -220 3052 2588 220 362 22 0 chr2 229174352 229174490 -21513364 - L2 LINE L2 -736 2578 2438 2127 145 0 0 chr2 229174701 229175004 -21512850 + AluSq SINE Alu 1 303 -10 222 91 0 0 chr2 229176590 229176623 -21511231 + (TAA)n Simple_repeat Simple_repeat 1 33 0 265 318 36 0 chr2 229177164 229177274 -21510580 + MER70B LTR ERVL 445 558 -20 228 218 18 0 chr2 229177575 229177630 -21510224 - LTR16A1 LTR ERVL 0 457 402 310 264 16 93 chr2 229178027 229178156 -21509698 - L1ME4a LINE L1 -36 6085 5967 559 253 125 28 chr2 229178179 229178499 -21509355 - L1ME4a LINE L1 -235 5886 5536 335 309 11 63 chr2 229178609 229178800 -21509054 - L1ME4a LINE L1 -2368 5440 5260 27 49 0 0 chr2 229178807 229178848 -21509006 + AT_rich Low_complexity Low_complexity 1 41 0 2110 133 3 3 chr2 229179198 229179507 -21508347 + AluSc SINE Alu 1 309 0 23 0 0 0 chr2 229179917 229179940 -21507914 + AT_rich Low_complexity Low_complexity 1 23 0 202 333 0 35 chr2 229179940 229180027 -21507827 - MIR SINE MIR -105 103 20 21 0 0 0 chr2 229180117 229180138 -21507716 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr2 229180957 229180989 -21506865 + AT_rich Low_complexity Low_complexity 1 32 0 2008 112 0 14 chr2 229181125 229181426 -21506428 + AluSx SINE Alu 11 307 0 560 90 0 0 chr2 229181618 229181696 -21506158 - THE1C LTR MaLR -297 78 1 191 254 102 17 chr2 229182640 229182699 -21505155 - MIR SINE MIR -197 65 2 274 361 66 45 chr2 229182707 229182995 -21504859 - L2 LINE L2 -87 3185 2892 204 351 81 9 chr2 229183313 229183424 -21504430 - L2 LINE L2 -677 2637 2519 313 294 31 82 chr2 229183572 229183766 -21504088 - L1ME4a LINE L1 -246 5875 5692 31 0 0 0 chr2 229183977 229184008 -21503846 + AT_rich Low_complexity Low_complexity 1 31 0 221 312 0 52 chr2 229184016 229184093 -21503761 + L2 LINE L2 3241 3313 0 476 276 192 20 chr2 229184544 229184747 -21503107 + MIR SINE MIR 12 249 -13 392 257 196 14 chr2 229184916 229185064 -21502790 + MER5A DNA MER1_type 9 183 -6 394 269 136 74 chr2 229185227 229185536 -21502318 + MLT1L LTR MaLR 201 528 -87 1100 250 132 59 chr2 229185566 229186074 -21501780 + MER77 LTR ERV1 54 598 -7 5497 193 72 25 chr2 229186241 229187580 -21500274 - Charlie1a DNA MER1_type 0 1455 54 368 266 119 21 chr2 229187855 229187998 -21499856 + MIR SINE MIR 106 262 0 24 0 0 0 chr2 229188474 229188498 -21499356 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr2 229189209 229189232 -21498622 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 393 314 176 32 chr2 229190478 229190886 -21496968 + L2 LINE L2 2839 3305 -8 307 263 73 29 chr2 229190931 229191068 -21496786 + L1MC4a LINE L1 5796 5938 -1870 610 277 184 11 chr2 229191210 229191477 -21496377 - L2 LINE L2 0 3313 3001 566 255 23 80 chr2 229191482 229191784 -21496070 - MLT1I LTR MaLR -8 401 117 499 322 166 7 chr2 229191859 229192148 -21495706 - L2 LINE L2 -311 3002 2669 255 31 0 0 chr2 229192315 229192347 -21495507 + (TG)n Simple_repeat Simple_repeat 2 33 0 516 290 50 54 chr2 229193029 229193346 -21494508 + L2 LINE L2 2470 2785 -529 210 150 0 0 chr2 229193353 229193393 -21494461 + (A)n Simple_repeat Simple_repeat 1 40 0 319 304 118 14 chr2 229193730 229194085 -21493769 - L1MEd LINE L1 -3388 2741 2350 474 280 41 55 chr2 229194268 229194758 -21493096 - L1MEd LINE L1 -4883 1236 754 516 322 69 63 chr2 229194955 229195303 -21492551 - L1MEd LINE L1 -5685 434 85 1451 241 123 68 chr2 229195303 229196198 -21491656 + L1MC4a LINE L1 5774 6717 -1091 711 126 8 8 chr2 229196397 229196516 -21491338 + L1PA15 LINE L1 6034 6152 -13 22 35 0 0 chr2 229196610 229196639 -21491215 + AT_rich Low_complexity Low_complexity 1 29 0 1861 172 0 0 chr2 229196942 229197238 -21490616 + AluJb SINE Alu 1 296 -16 197 33 33 0 chr2 229197347 229197377 -21490477 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2201 92 18 0 chr2 229197380 229197664 -21490190 - AluSq SINE Alu -24 289 1 676 131 7 73 chr2 229197970 229198107 -21489747 - FRAM SINE Alu -11 165 38 886 195 0 6 chr2 229198211 229198375 -21489479 + THE1-int LTR MaLR 1084 1246 -334 761 278 87 10 chr2 229198377 229198932 -21488922 + L1M1 LINE L1 2895 3494 -4071 332 137 73 8 chr2 229198937 229199061 -21488793 + (TA)n Simple_repeat Simple_repeat 1 132 0 214 129 32 0 chr2 229199080 229199142 -21488712 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 51 0 0 0 chr2 229199142 229199193 -21488661 + AT_rich Low_complexity Low_complexity 1 51 0 344 61 31 51 chr2 229199193 229199291 -21488563 + (TTAA)n Simple_repeat Simple_repeat 3 98 0 38 51 0 0 chr2 229199297 229199356 -21488498 + AT_rich Low_complexity Low_complexity 1 59 0 314 81 20 50 chr2 229199356 229199455 -21488399 + (TTAA)n Simple_repeat Simple_repeat 4 99 0 205 164 27 0 chr2 229199470 229199543 -21488311 + (TA)n Simple_repeat Simple_repeat 1 75 0 80 30 0 0 chr2 229199543 229199644 -21488210 + AT_rich Low_complexity Low_complexity 1 101 0 181 109 30 50 chr2 229199644 229199745 -21488109 + (TATAA)n Simple_repeat Simple_repeat 1 99 0 1630 215 43 23 chr2 229199746 229200233 -21487621 + L1M1 LINE L1 3508 4001 -3564 308 357 94 5 chr2 229203042 229203255 -21484599 + L1MC4a LINE L1 4888 5119 -1027 2308 264 85 13 chr2 229203366 229204225 -21483629 + L1MC4a LINE L1 5258 6178 -1630 233 289 59 35 chr2 229205759 229205919 -21481935 + MIR3 SINE MIR 11 172 -36 354 287 52 103 chr2 229206312 229206486 -21481368 + MIR3 SINE MIR 43 207 -1 244 226 21 11 chr2 229206963 229207056 -21480798 + CT-rich Low_complexity Low_complexity 3 96 0 357 338 25 19 chr2 229207098 229207255 -21480599 + MIR SINE MIR 47 204 -58 395 256 83 0 chr2 229207950 229208071 -21479783 + MIR SINE MIR 62 192 -70 306 50 0 0 chr2 229208175 229208215 -21479639 + (TG)n Simple_repeat Simple_repeat 1 40 0 507 222 111 7 chr2 229208440 229208575 -21479279 - MIR SINE MIR 0 262 114 443 286 63 19 chr2 229208819 229209025 -21478829 + L2 LINE L2 2532 2746 -568 210 37 0 0 chr2 229209070 229209097 -21478757 + (A)n Simple_repeat Simple_repeat 1 27 0 723 154 20 87 chr2 229209157 229209206 -21478648 - MLT2D LTR ERVL -2 412 361 306 106 0 0 chr2 229209206 229209253 -21478601 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 1936 184 87 74 chr2 229209258 229209800 -21478054 + MLT2B3 LTR ERVL 5 553 -1 723 154 20 87 chr2 229209800 229209893 -21477961 - MLT2D LTR ERVL -57 357 274 1207 206 20 23 chr2 229210211 229210512 -21477342 - MLT2D LTR ERVL -114 300 1 279 262 24 24 chr2 229210598 229210682 -21477172 + L2 LINE L2 3191 3274 -39 327 327 103 42 chr2 229211084 229211249 -21476605 - MIR3 SINE MIR -11 197 23 419 29 0 223 chr2 229211512 229211615 -21476239 - MADE1 DNA Mariner 0 80 1 1183 158 0 35 chr2 229211624 229211826 -21476028 - AluJo SINE Alu -32 280 86 2051 115 45 0 chr2 229212057 229212344 -21475510 - AluSx SINE Alu -12 300 1 2271 107 7 0 chr2 229212916 229213225 -21474629 - AluSx SINE Alu -1 311 1 375 41 0 0 chr2 229213716 229213765 -21474089 + (CA)n Simple_repeat Simple_repeat 2 50 0 296 93 0 19 chr2 229216184 229216238 -21471616 + (CAAAA)n Simple_repeat Simple_repeat 3 55 0 1936 156 64 12 chr2 229217158 229217504 -21470350 + THE1B LTR MaLR 1 364 0 1994 247 74 42 chr2 229217970 229218536 -21469318 - MLT1E LTR MaLR -9 584 1 659 235 84 46 chr2 229218599 229218837 -21469017 + MIR SINE MIR 3 249 -13 270 356 10 0 chr2 229218888 229218989 -21468865 - Charlie7 DNA MER1_type -2510 102 1 321 279 29 57 chr2 229219049 229219189 -21468665 - MIR3 SINE MIR -10 198 63 23 0 0 0 chr2 229219792 229219815 -21468039 + AT_rich Low_complexity Low_complexity 1 23 0 296 47 0 23 chr2 229220280 229220323 -21467531 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 591 253 30 84 chr2 229221551 229221613 -21466241 + MIR SINE MIR 2 66 -196 2403 107 33 6 chr2 229221613 229221978 -21465876 - THE1C LTR MaLR 0 375 1 591 253 30 84 chr2 229221978 229222152 -21465702 + MIR SINE MIR 66 225 -37 188 358 26 33 chr2 229222318 229222469 -21465385 - MER5A DNA MER1_type -2 187 38 424 171 214 64 chr2 229222505 229222645 -21465209 + MER5A DNA MER1_type 29 189 0 880 253 72 67 chr2 229222913 229223437 -21464417 + MLT2F LTR ERVL 5 571 -92 219 139 0 0 chr2 229223542 229223578 -21464276 + (TG)n Simple_repeat Simple_repeat 2 37 0 580 293 30 0 chr2 229223739 229223903 -21463951 - MIR SINE MIR 0 262 94 1046 68 0 47 chr2 229223934 229224082 -21463772 + AluSg/x SINE Alu 171 311 -1 324 172 75 11 chr2 229224203 229224296 -21463558 - L1ME4a LINE L1 -5 6116 6018 1877 186 0 0 chr2 229225809 229226110 -21461744 + AluJb SINE Alu 1 301 -11 209 283 0 0 chr2 229226336 229226389 -21461465 + CT-rich Low_complexity Low_complexity 1 53 0 225 223 204 39 chr2 229226675 229226778 -21461076 - L1ME4a LINE L1 -330 5836 5717 928 220 0 5 chr2 229226799 229226985 -21460869 - L1ME4a LINE L1 -547 5617 5433 415 224 104 62 chr2 229227310 229227502 -21460352 + L1MC5 LINE L1 7715 7914 -47 2696 119 0 11 chr2 229228057 229228436 -21459418 - THE1C LTR MaLR 0 375 1 403 303 123 7 chr2 229229068 229229223 -21458631 - MIR3 SINE MIR -33 175 3 1381 146 114 50 chr2 229229402 229229683 -21458171 + AluSx SINE Alu 1 299 -13 189 355 33 8 chr2 229230003 229230124 -21457730 - MER5A DNA MER1_type 0 189 66 880 219 9 24 chr2 229230203 229230413 -21457441 - MER106A DNA MER1_type 0 236 30 687 206 142 50 chr2 229230605 229230824 -21457030 - MIR SINE MIR -21 241 3 488 301 9 59 chr2 229231512 229231670 -21456184 - MIR SINE MIR -15 247 101 1383 183 49 126 chr2 229231670 229232049 -21455805 + MLT1A2 LTR MaLR 1 349 -25 298 40 0 40 chr2 229232049 229232099 -21455755 + (TTG)n Simple_repeat Simple_repeat 2 49 0 1383 183 49 126 chr2 229232099 229232124 -21455730 + MLT1A2 LTR MaLR 349 374 0 488 301 9 59 chr2 229232124 229232184 -21455670 - MIR SINE MIR -161 101 40 38 22 0 0 chr2 229232240 229232285 -21455569 + AT_rich Low_complexity Low_complexity 1 45 0 351 245 87 77 chr2 229232305 229232501 -21455353 - L2 LINE L2 -1 3312 3115 196 42 0 0 chr2 229233071 229233095 -21454759 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1887 155 0 7 chr2 229233095 229233379 -21454475 - AluSg SINE Alu -1 305 1 579 249 67 37 chr2 229233431 229233606 -21454248 - L1MC4a LINE L1 -1844 5964 5777 1741 189 0 17 chr2 229233606 229233902 -21453952 - AluJb SINE Alu -21 291 1 579 249 67 37 chr2 229233902 229233995 -21453859 - L1MC4a LINE L1 -2031 5777 5688 256 0 0 0 chr2 229234060 229234097 -21453757 + AluY SINE Alu 266 302 0 402 271 65 23 chr2 229234121 229234335 -21453519 - L1MC4a LINE L1 -2289 5519 5297 2352 104 48 20 chr2 229235054 229235408 -21452446 + THE1B LTR MaLR 1 364 0 276 342 47 34 chr2 229235765 229235914 -21451940 - L3 LINE CR1 -1385 192 42 204 340 10 31 chr2 229237074 229237171 -21450683 - MIR SINE MIR -109 153 59 850 235 0 6 chr2 229237407 229237569 -21450285 + MER63A DNA MER1_type 44 204 -6 216 388 0 0 chr2 229237748 229237815 -21450039 - L2 LINE L2 -97 3175 3109 910 187 0 0 chr2 229237972 229238122 -21449732 + FRAM SINE Alu 1 150 -26 259 327 27 27 chr2 229238302 229238412 -21449442 + MER5A DNA MER1_type 2 111 -78 572 296 67 38 chr2 229239151 229239391 -21448463 - MIR SINE MIR -10 252 6 23 68 0 0 chr2 229240937 229240981 -21446873 + AT_rich Low_complexity Low_complexity 1 44 0 2057 127 3 0 chr2 229240984 229241267 -21446587 - AluSg SINE Alu -26 284 1 187 340 0 0 chr2 229241345 229241392 -21446462 + L2 LINE L2 3007 3053 -219 364 286 84 19 chr2 229243432 229243586 -21444268 + MIR SINE MIR 34 197 -65 752 215 54 68 chr2 229243736 229243941 -21443913 - MER20 DNA MER1_type 0 219 18 1082 41 23 17 chr2 229245532 229245704 -21442150 + (GAAA)n Simple_repeat Simple_repeat 3 175 0 425 172 11 0 chr2 229245704 229245797 -21442057 + GA-rich Low_complexity Low_complexity 2 95 0 264 329 185 22 chr2 229247178 229247400 -21440454 - MIR SINE MIR -2 260 3 2160 110 83 9 chr2 229247412 229247739 -21440115 - THE1B LTR MaLR -13 351 1 194 157 0 20 chr2 229248962 229249013 -21438841 + (TA)n Simple_repeat Simple_repeat 2 51 0 23 54 0 0 chr2 229249644 229249681 -21438173 + AT_rich Low_complexity Low_complexity 1 37 0 2077 199 37 12 chr2 229249916 229249960 -21437894 + L1M4 LINE L1 4572 4613 -1533 261 0 0 0 chr2 229249960 229249989 -21437865 + (TG)n Simple_repeat Simple_repeat 2 30 0 2077 199 37 12 chr2 229249989 229250427 -21437427 + L1M4 LINE L1 4613 5066 -1080 181 250 0 0 chr2 229251489 229251525 -21436329 + MIR SINE MIR 107 142 -66 268 286 76 9 chr2 229251648 229251753 -21436101 + MER117 DNA MER1_type 1 112 -85 248 175 16 0 chr2 229252705 229252768 -21435086 + (TG)n Simple_repeat Simple_repeat 1 64 0 2016 129 23 50 chr2 229253138 229253289 -21434565 - THE1B LTR MaLR 0 364 211 2596 56 0 0 chr2 229253289 229253595 -21434259 - AluY SINE Alu -5 306 1 2016 129 23 50 chr2 229253595 229253785 -21434069 - THE1B LTR MaLR -153 211 32 234 290 65 0 chr2 229253801 229253863 -21433991 + L2 LINE L2 3247 3312 -1 190 194 0 0 chr2 229253997 229254033 -21433821 - MIR SINE MIR -137 71 36 278 243 140 0 chr2 229254914 229254966 -21432888 + L2 LINE L2 3187 3230 -83 2723 107 0 0 chr2 229254966 229255330 -21432524 + THE1B LTR MaLR 1 364 0 278 243 140 0 chr2 229255330 229255384 -21432470 + L2 LINE L2 3230 3308 -5 1043 198 14 27 chr2 229255417 229255639 -21432215 + MER20 DNA MER1_type 1 219 0 2401 134 63 22 chr2 229257064 229257475 -21430379 - MSTA LTR MaLR 0 428 1 414 307 129 10 chr2 229257491 229257687 -21430167 - MIR SINE MIR -12 250 35 1758 166 3 16 chr2 229258068 229258381 -21429473 - AluJo SINE Alu -3 309 1 2012 75 75 11 chr2 229258427 229258708 -21429146 + AluSc SINE Alu 1 299 -10 747 238 48 61 chr2 229258947 229259178 -21428676 + L1MD2 LINE L1 6047 6274 -85 1083 201 50 119 chr2 229259185 229259563 -21428291 + MLT1A1 LTR MaLR 14 365 0 260 62 0 0 chr2 229259617 229259649 -21428205 - MLT2D LTR ERVL 0 414 383 377 232 11 0 chr2 229259650 229259745 -21428109 - MLT2B2 LTR ERVL -419 96 1 419 105 81 12 chr2 229259873 229259959 -21427895 - L1 LINE L1 -1320 4826 4735 4314 162 13 28 chr2 229259960 229260820 -21427034 + L1MA4 LINE L1 5448 6294 -6 27 29 0 0 chr2 229260820 229260854 -21427000 + AT_rich Low_complexity Low_complexity 1 34 0 252 264 28 47 chr2 229260875 229260981 -21426873 + MLT1H-int LTR MaLR 1244 1347 -24 226 320 70 39 chr2 229261005 229261161 -21426693 + MLT1H LTR MaLR 2 162 -387 266 237 53 88 chr2 229261227 229261341 -21426513 + MLT1H LTR MaLR 425 534 -15 312 393 27 0 chr2 229261368 229261480 -21426374 - L2 LINE L2 -5 3267 3153 23 33 0 0 chr2 229261559 229261589 -21426265 + AT_rich Low_complexity Low_complexity 1 30 0 272 308 84 67 chr2 229261948 229262247 -21425607 + L2 LINE L2 2559 2862 -452 507 299 122 0 chr2 229262278 229262425 -21425429 + MER96 DNA MER1_type? 1 165 -10 207 305 116 55 chr2 229262428 229262592 -21425262 + L2 LINE L2 2906 3079 -193 520 324 74 45 chr2 229262726 229263362 -21424492 + L2 LINE L2 2445 3101 -171 344 234 138 57 chr2 229263484 229263766 -21424088 - L1MC5 LINE L1 -44 7917 7613 201 226 94 0 chr2 229263820 229263873 -21423981 + L2 LINE L2 3254 3311 -2 368 326 15 0 chr2 229264651 229264783 -21423071 - L1ME LINE L1 -382 5739 5606 1720 128 21 102 chr2 229264787 229265122 -21422732 + AluYb8 SINE Alu 1 308 -10 266 231 67 29 chr2 229265243 229265347 -21422507 - L1ME4a LINE L1 -3 6118 6011 2069 112 0 0 chr2 229266141 229266450 -21421404 - AluSx SINE Alu 0 314 6 26 50 0 0 chr2 229266450 229266490 -21421364 + AT_rich Low_complexity Low_complexity 1 40 0 21 71 0 0 chr2 229267348 229267390 -21420464 + AT_rich Low_complexity Low_complexity 1 42 0 2463 61 3 0 chr2 229267947 229268243 -21419611 - AluY SINE Alu -14 297 1 22 35 0 0 chr2 229268255 229268284 -21419570 + AT_rich Low_complexity Low_complexity 1 29 0 372 329 141 46 chr2 229268756 229269039 -21418815 - HAL1b LINE L1 -594 754 445 886 196 70 10 chr2 229269138 229269337 -21418517 + MER58A DNA MER1_type 11 221 -3 1010 273 8 8 chr2 229270506 229270762 -21417092 - MIR SINE MIR -5 257 2 202 243 57 0 chr2 229271439 229271509 -21416345 - MIR SINE MIR -70 192 119 1980 131 6 13 chr2 229271978 229272290 -21415564 - AluSx SINE Alu -2 310 1 388 278 77 101 chr2 229273028 229273482 -21414372 - L1M4 LINE L1 -1322 4824 4382 23 33 0 0 chr2 229273486 229273516 -21414338 + AT_rich Low_complexity Low_complexity 1 30 0 346 287 22 53 chr2 229273525 229273758 -21414096 + L1MDa LINE L1 1515 1864 -879 488 304 63 43 chr2 229274271 229274488 -21413366 - MIR SINE MIR 0 262 38 818 192 9 76 chr2 229274488 229274712 -21413142 - MER3 DNA MER1_type 0 209 1 488 304 63 43 chr2 229274712 229274747 -21413107 - MIR SINE MIR -224 38 5 396 352 22 23 chr2 229274859 229275056 -21412798 + L1MB3 LINE L1 5404 5607 -514 2028 138 3 0 chr2 229275056 229275354 -21412500 + AluSx SINE Alu 1 299 -13 396 352 22 23 chr2 229275354 229275376 -21412478 + L1MB3 LINE L1 5607 5628 -493 294 50 0 0 chr2 229276249 229276289 -21411565 + (TG)n Simple_repeat Simple_repeat 2 41 0 1985 120 10 20 chr2 229276294 229276593 -21411261 - AluSx SINE Alu -15 297 2 378 179 26 0 chr2 229276786 229276903 -21410951 + L1M4c LINE L1 19 202 -6182 1835 169 41 74 chr2 229276904 229277018 -21410836 + L1M4c LINE L1 1806 1922 -4631 1409 199 42 25 chr2 229277018 229277304 -21410550 + AluJb SINE Alu 3 293 -19 1835 169 41 74 chr2 229277304 229277825 -21410029 + L1M4c LINE L1 1922 2561 -3992 2870 168 9 90 chr2 229277830 229278573 -21409281 + L1MA9 LINE L1 5596 6278 -34 2184 242 87 33 chr2 229278584 229278869 -21408985 + L1M4c LINE L1 2507 2775 -3607 1908 167 0 0 chr2 229278869 229279157 -21408697 + AluSx SINE Alu 1 288 -24 2184 242 87 33 chr2 229279157 229279719 -21408135 + L1M4c LINE L1 2775 3400 -2982 2069 130 38 6 chr2 229279720 229280066 -21407788 + L1MB3 LINE L1 5818 6174 -9 273 191 36 83 chr2 229281006 229281090 -21406764 - MIR SINE MIR -62 146 67 297 0 0 0 chr2 229281181 229281214 -21406640 + (TTTTG)n Simple_repeat Simple_repeat 5 37 0 1826 141 0 4 chr2 229281217 229281487 -21406367 - AluSx SINE Alu -37 275 7 192 77 0 0 chr2 229282773 229282799 -21405055 + (TTA)n Simple_repeat Simple_repeat 1 26 0 1038 239 0 0 chr2 229284521 229284739 -21403115 + MER58A DNA MER1_type 7 224 0 1756 177 6 25 chr2 229284926 229285242 -21402612 + AluJo SINE Alu 1 310 -2 2309 113 0 0 chr2 229285365 229285674 -21402180 + AluSg SINE Alu 1 309 -1 2313 102 0 13 chr2 229286113 229286428 -21401426 - AluSq SINE Alu -2 311 1 251 404 46 0 chr2 229286715 229286824 -21401030 + L2 LINE L2 3143 3256 -16 342 206 15 76 chr2 229286850 229286871 -21400983 + L2 LINE L2 2735 2756 -558 2398 102 0 0 chr2 229286871 229287174 -21400680 - AluSq SINE Alu -6 307 5 342 206 15 76 chr2 229287174 229287283 -21400571 + L2 LINE L2 2756 2857 -457 524 96 14 0 chr2 229287288 229287361 -21400493 + AluS SINE Alu 22 95 -217 623 270 187 36 chr2 229287364 229287749 -21400105 + L2 LINE L2 2871 3313 0 1657 160 98 28 chr2 229289861 229290217 -21397637 + MLT1B LTR MaLR 10 390 0 857 179 93 6 chr2 229290467 229290629 -21397225 + AluJo SINE Alu 123 298 -14 232 222 111 12 chr2 229290706 229290787 -21397067 + MLT1J LTR MaLR 36 124 -387 332 326 124 17 chr2 229290816 229291178 -21396676 + MLT1J LTR MaLR 110 510 -1 1395 267 84 20 chr2 229291323 229291885 -21395969 + L1ME3A LINE L1 5303 5900 -270 2176 118 6 10 chr2 229292101 229292415 -21395439 + AluSq SINE Alu 1 313 0 610 260 46 17 chr2 229292669 229292842 -21395012 + MIR SINE MIR 15 192 -70 204 240 0 0 chr2 229292876 229292926 -21394928 + (TTA)n Simple_repeat Simple_repeat 3 52 0 210 158 0 0 chr2 229293297 229293335 -21394519 + A-rich Low_complexity Low_complexity 1 38 0 767 233 9 66 chr2 229296465 229296693 -21391161 + MER20 DNA MER1_type 4 218 -1 2046 147 10 0 chr2 229296767 229297067 -21390787 + AluJb SINE Alu 1 303 -9 768 21 0 0 chr2 229298253 229298349 -21389505 - L1PA8 LINE L1 0 6172 6077 409 149 0 0 chr2 229298480 229298547 -21389307 + MIR SINE MIR 196 262 0 225 340 0 0 chr2 229304713 229304819 -21383035 - L1 LINE L1 -1809 4337 4232 625 304 80 5 chr2 229305265 229305489 -21382365 + MIR SINE MIR 11 251 -11 324 0 0 0 chr2 229305549 229305585 -21382269 + (TC)n Simple_repeat Simple_repeat 1 36 0 24 67 0 0 chr2 229305610 229305655 -21382199 + AT_rich Low_complexity Low_complexity 1 45 0 236 229 0 0 chr2 229305736 229305797 -21382057 + L1ME3A LINE L1 6108 6168 -2 1846 102 35 46 chr2 229306000 229306308 -21381546 - AluSx SINE Alu 0 305 1 239 167 21 0 chr2 229306550 229306598 -21381256 + GA-rich Low_complexity Low_complexity 2 50 0 306 312 159 0 chr2 229306724 229306881 -21380973 + L3 LINE CR1 1295 1476 -101 1316 163 8 17 chr2 229307388 229307628 -21380226 - MSTB LTR MaLR 0 426 189 1220 82 0 41 chr2 229307628 229307799 -21380055 - AluSc SINE Alu -17 292 129 1357 96 5 0 chr2 229307799 229307997 -21379857 - MSTB LTR MaLR -227 199 1 507 271 108 12 chr2 229308087 229308253 -21379601 - MIR SINE MIR -48 214 33 364 260 10 42 chr2 229309381 229309477 -21378377 - MIR3 SINE MIR -3 205 113 23 0 0 0 chr2 229309477 229309500 -21378354 + AT_rich Low_complexity Low_complexity 1 23 0 200 222 0 0 chr2 229309522 229309567 -21378287 + A-rich Low_complexity Low_complexity 1 45 0 2464 80 0 0 chr2 229310505 229310816 -21377038 - AluY SINE Alu 0 311 1 1321 206 30 73 chr2 229310908 229311307 -21376547 - MLT1B LTR MaLR -2 388 7 2097 116 20 7 chr2 229311368 229311670 -21376184 + AluSx SINE Alu 7 312 0 2071 180 17 3 chr2 229311777 229312133 -21375721 + MLT1A1 LTR MaLR 5 365 0 249 250 21 42 chr2 229312171 229312267 -21375587 + MIR SINE MIR 74 167 -95 312 285 41 24 chr2 229312487 229312610 -21375244 - L1ME4a LINE L1 -49 6072 5948 494 255 33 11 chr2 229312640 229312847 -21375007 - L1ME4a LINE L1 -256 5865 5659 24 67 0 0 chr2 229313997 229314042 -21373812 + AT_rich Low_complexity Low_complexity 1 45 0 1725 181 0 48 chr2 229314734 229315049 -21372805 + AluJo SINE Alu 3 302 -10 2120 142 0 7 chr2 229315762 229316072 -21371782 + AluSx SINE Alu 1 308 -4 563 297 55 6 chr2 229316640 229316822 -21371032 + MIR SINE MIR 64 254 -8 516 390 0 0 chr2 229316848 229316994 -21370860 - MER91A DNA MER1_type -50 146 1 1501 232 0 9 chr2 229318163 229318478 -21369376 - AluJo SINE Alu 0 312 1 293 284 76 24 chr2 229318489 229318700 -21369154 - MARNA DNA Mariner -203 383 162 270 260 20 90 chr2 229318768 229318868 -21368986 + L2 LINE L2 3187 3279 -34 748 273 29 24 chr2 229319032 229319241 -21368613 - MIR SINE MIR -39 223 14 254 145 161 32 chr2 229319417 229319479 -21368375 - MLT1B LTR MaLR -279 111 42 297 356 56 12 chr2 229319661 229319821 -21368033 + MIR3 SINE MIR 19 185 -23 293 366 86 23 chr2 229320624 229320799 -21367055 - MER5A DNA MER1_type -1 188 3 225 0 0 0 chr2 229322230 229322255 -21365599 + (T)n Simple_repeat Simple_repeat 1 25 0 2197 126 0 0 chr2 229323557 229323859 -21363995 + AluSx SINE Alu 1 302 -10 438 125 25 0 chr2 229325378 229325458 -21362396 + Alu SINE Alu 229 310 0 2311 105 0 6 chr2 229325545 229325858 -21361996 - AluY SINE Alu 0 311 1 21 0 0 0 chr2 229327132 229327153 -21360701 + AT_rich Low_complexity Low_complexity 1 21 0 230 278 0 0 chr2 229327201 229327255 -21360599 + L3 LINE CR1 1306 1359 -218 379 301 75 0 chr2 229327537 229327615 -21360239 + MIR SINE MIR 63 134 -128 797 266 70 6 chr2 229327615 229327931 -21359923 - MER46C DNA MER2_type -2 336 1 379 301 75 0 chr2 229327931 229327998 -21359856 + MIR SINE MIR 134 219 -43 1885 153 0 0 chr2 229329752 229330039 -21357815 + AluSx SINE Alu 1 287 -25 409 198 27 18 chr2 229330151 229330262 -21357592 - LTR56 LTR ERV1 -333 112 1 234 260 42 0 chr2 229330336 229330432 -21357422 + (TA)n Simple_repeat Simple_repeat 1 100 0 958 92 13 7 chr2 229330624 229330776 -21357078 + (TTTC)n Simple_repeat Simple_repeat 2 154 0 1651 105 4 74 chr2 229330778 229331036 -21356818 - AluSc SINE Alu -33 276 37 338 291 8 71 chr2 229331186 229331313 -21356541 - L2 LINE L2 -1 3271 3153 378 0 0 0 chr2 229332977 229333019 -21354835 + (TG)n Simple_repeat Simple_repeat 2 43 0 1596 136 199 33 chr2 229333155 229333522 -21354332 - MSTA LTR MaLR 0 428 1 199 310 0 0 chr2 229333550 229333608 -21354246 + L2 LINE L2 3251 3308 -5 345 309 67 38 chr2 229333636 229333846 -21354008 + MIR SINE MIR 47 262 0 4890 134 45 16 chr2 229333855 229334773 -21353081 - L1MA4A LINE L1 -5 6298 5355 202 280 67 13 chr2 229335172 229335247 -21352607 - L2 LINE L2 -18 3254 3176 444 200 200 15 chr2 229335478 229335608 -21352246 + MER5A DNA MER1_type 15 168 -21 888 215 129 0 chr2 229336349 229336628 -21351226 - L1MD3 LINE L1 0 7995 7681 3035 208 32 87 chr2 229336636 229337695 -21350159 - L1MC3 LINE L1 -605 7180 6180 2084 148 90 18 chr2 229338110 229338509 -21349345 + MSTA LTR MaLR 1 428 0 6207 169 46 61 chr2 229338511 229338857 -21348997 + MSTA-int LTR MaLR 3 353 -1227 1249 134 74 14 chr2 229338857 229339074 -21348780 - MER30 DNA MER1_type 0 230 1 6207 169 46 61 chr2 229339074 229339113 -21348741 + MSTA-int LTR MaLR 353 391 -1189 2038 141 0 33 chr2 229339113 229339417 -21348437 - AluSx SINE Alu -18 294 1 6207 169 46 61 chr2 229339417 229340447 -21347407 + MSTA-int LTR MaLR 391 1397 -183 237 253 0 48 chr2 229340687 229340770 -21347084 + MIR SINE MIR 172 250 -12 734 201 113 0 chr2 229340781 229340940 -21346914 + MER45A DNA AcHobo 2 178 0 207 197 45 15 chr2 229340978 229341044 -21346810 + GA-rich Low_complexity Low_complexity 4 71 0 33 0 0 0 chr2 229341073 229341106 -21346748 + AT_rich Low_complexity Low_complexity 1 33 0 625 294 39 91 chr2 229341595 229341741 -21346113 - L3 LINE CR1 -233 1344 1192 1885 149 0 7 chr2 229341741 229342016 -21345838 + AluJo SINE Alu 22 294 -18 625 294 39 91 chr2 229342016 229342254 -21345600 - L3 LINE CR1 -385 1192 980 2198 113 15 73 chr2 229342301 229342347 -21345507 - THE1C LTR MaLR 0 375 328 2549 47 0 7 chr2 229342347 229342646 -21345208 + AluY SINE Alu 1 297 -14 2198 113 15 73 chr2 229342646 229342997 -21344857 - THE1C LTR MaLR -47 328 1 2336 98 0 0 chr2 229345202 229345499 -21342355 - AluSc SINE Alu -12 297 1 601 242 36 27 chr2 229345743 229345966 -21341888 - MER112 DNA MER1_type -6 254 30 444 171 56 25 chr2 229346405 229346537 -21341317 - LTR24B LTR ERV1 0 635 470 476 309 54 12 chr2 229346711 229346879 -21340975 - MIR SINE MIR -39 223 49 304 286 8 63 chr2 229347030 229347156 -21340698 - MIR SINE MIR -74 188 70 333 237 0 13 chr2 229348367 229348443 -21339411 - MIR SINE MIR -71 191 117 22 70 0 0 chr2 229349120 229349163 -21338691 + AT_rich Low_complexity Low_complexity 1 43 0 617 170 0 9 chr2 229350127 229350239 -21337615 + MLT1A1 LTR MaLR 1 111 -254 * 968 120 4 8 chr2 229350228 229350390 -21337464 + MLT1A1 LTR MaLR 225 365 0 4193 155 12 22 chr2 229350727 229351651 -21336203 + L1PB4 LINE L1 4823 5744 -412 2234 164 45 35 chr2 229351651 229352073 -21335781 - MSTB LTR MaLR 0 426 1 4193 155 12 22 chr2 229352073 229352339 -21335515 + L1PB4 LINE L1 5744 6011 -145 377 191 0 0 chr2 229352348 229352432 -21335422 + L1PB4 LINE L1 6073 6156 0 366 312 50 35 chr2 229353815 229353956 -21333898 + MIR3 SINE MIR 32 174 -34 571 191 149 46 chr2 229353995 229354189 -21333665 - MER106A DNA MER1_type -22 214 1 457 288 119 49 chr2 229354219 229354533 -21333321 + L1 LINE L1 4680 5021 -1125 2254 120 0 0 chr2 229354533 229354833 -21333021 + AluSx SINE Alu 1 300 -12 457 288 119 49 chr2 229354833 229354862 -21332992 + L1 LINE L1 5021 5047 -1099 501 320 111 65 chr2 229354881 229355315 -21332539 - L1MEd LINE L1 -5247 872 419 1807 183 31 6 chr2 229355738 229356088 -21331766 + MLT1A1 LTR MaLR 6 364 -1 413 219 17 180 chr2 229356364 229356597 -21331257 + MIR SINE MIR 68 262 0 22 0 0 0 chr2 229356830 229356852 -21331002 + AT_rich Low_complexity Low_complexity 1 22 0 1465 161 65 65 chr2 229357300 229357746 -21330108 - Charlie1b DNA MER1_type -1 522 77 383 306 16 0 chr2 229357742 229357863 -21329991 - Charlie1b DNA MER1_type -394 129 7 * 635 203 158 0 chr2 229357893 229358051 -21329803 - MIR SINE MIR -78 184 2 259 225 25 25 chr2 229358130 229358210 -21329644 + (TCTA)n Simple_repeat Simple_repeat 1 80 0 4592 80 1 14 chr2 229359541 229360189 -21327665 + L1PA8A LINE L1 5465 6104 -27 420 226 38 9 chr2 229361396 229361502 -21326352 - LTR67 LTR ERVL -8 549 441 342 301 34 14 chr2 229361693 229361839 -21326015 - ERVL LTR ERVL -1547 4217 4069 1780 339 53 20 chr2 229361844 229362917 -21324937 + ERVL LTR ERVL 4219 5326 -438 1096 277 118 16 chr2 229363177 229363618 -21324236 + LTR33 LTR ERVL 32 517 -4 458 217 125 0 chr2 229363648 229363768 -21324086 - MIR SINE MIR -30 232 98 687 264 77 109 chr2 229364274 229364581 -21323273 - MLT1K LTR MaLR 0 588 308 2486 76 0 0 chr2 229364581 229364884 -21322970 + AluY SINE Alu 1 303 -8 687 264 77 109 chr2 229364884 229365170 -21322684 - MLT1K LTR MaLR -280 308 14 1437 207 9 12 chr2 229365233 229365571 -21322283 + MER63 DNA MER1_type 675 1011 -51 200 29 0 59 chr2 229365875 229365909 -21321945 + (CAAAAA)n Simple_repeat Simple_repeat 6 37 0 234 296 61 31 chr2 229366050 229366148 -21321706 - L2 LINE L2 -19 3253 3153 226 425 0 0 chr2 229366362 229366456 -21321398 - MIR SINE MIR -167 95 2 5666 168 20 10 chr2 229366565 229368361 -21319493 + L1PB3 LINE L1 4006 5834 -320 2065 119 0 3 chr2 229368361 229368689 -21319165 + AluSq SINE Alu 1 327 0 5666 168 20 10 chr2 229368689 229369014 -21318840 + L1PB3 LINE L1 5834 6154 0 24 0 0 0 chr2 229370420 229370444 -21317410 + AT_rich Low_complexity Low_complexity 1 24 0 736 326 114 23 chr2 229370574 229371012 -21316842 + L2 LINE L2 2836 3313 0 195 114 0 0 chr2 229372114 229372149 -21315705 + (GTTTG)n Simple_repeat Simple_repeat 1 35 0 1530 189 11 7 chr2 229372149 229372429 -21315425 - AluJb SINE Alu -31 281 1 1986 151 36 41 chr2 229372904 229373167 -21314687 + L1MC1 LINE L1 5939 6201 -132 2407 54 3 38 chr2 229373167 229373480 -21314374 - AluY SINE Alu -9 302 1 1986 151 36 41 chr2 229373480 229373606 -21314248 + L1MC1 LINE L1 6201 6326 -7 337 290 16 16 chr2 229373724 229373848 -21314006 - L1ME4a LINE L1 -277 5844 5721 258 273 83 41 chr2 229374105 229374226 -21313628 - MIR SINE MIR -13 249 124 26 64 0 0 chr2 229374341 229374388 -21313466 + AT_rich Low_complexity Low_complexity 1 47 0 2567 36 0 3 chr2 229374388 229374696 -21313158 - L1PA3 LINE L1 -3 6152 5846 365 200 91 73 chr2 229374996 229375161 -21312693 + MLT1H LTR MaLR 382 549 0 271 277 58 7 chr2 229375162 229375299 -21312555 - L1MC5 LINE L1 -62 7899 7756 * 433 226 16 8 chr2 229375291 229375415 -21312439 - L1MC5 LINE L1 -534 7427 7303 533 254 80 18 chr2 229375609 229375833 -21312021 - L1MC5 LINE L1 -756 7205 6968 231 61 0 0 chr2 229376259 229376292 -21311562 + (CA)n Simple_repeat Simple_repeat 2 34 0 306 290 61 15 chr2 229376929 229377060 -21310794 - L1ME4a LINE L1 -18 6103 5967 2238 174 39 7 chr2 229377090 229377505 -21310349 - MSTA LTR MaLR 0 428 1 4496 188 18 25 chr2 229377588 229377904 -21309950 + L1MA9 LINE L1 5121 5438 -874 2380 99 0 0 chr2 229377904 229378208 -21309646 + AluSq SINE Alu 1 304 -9 4496 188 18 25 chr2 229378208 229379050 -21308804 + L1MA9 LINE L1 5438 6273 -39 22 0 0 0 chr2 229379051 229379073 -21308781 + AT_rich Low_complexity Low_complexity 1 22 0 524 279 19 19 chr2 229379216 229379374 -21308480 - MER63A DNA MER1_type -1 209 52 251 256 98 23 chr2 229379491 229379624 -21308230 - Charlie8 DNA MER1_type -2183 234 92 394 311 25 121 chr2 229380185 229380500 -21307354 - L2 LINE L2 -1 3271 2987 331 213 13 0 chr2 229381497 229381572 -21306282 + MER94 DNA DNA 24 99 -35 1078 243 105 39 chr2 229381731 229382168 -21305686 + MLT1C LTR MaLR 2 467 0 1181 194 28 12 chr2 229382474 229382726 -21305128 - MLT1F1 LTR MaLR 0 567 312 837 169 0 15 chr2 229382839 229382975 -21304879 - AluJo SINE Alu -178 134 1 380 193 170 7 chr2 229382986 229383121 -21304733 - MLT1F1 LTR MaLR -385 157 1 996 169 107 37 chr2 229383525 229383767 -21304087 + MSTA LTR MaLR 170 428 0 2170 114 3 16 chr2 229384106 229384413 -21303441 + AluSc SINE Alu 5 307 -2 1488 211 39 14 chr2 229384888 229385005 -21302849 + AluJo SINE Alu 1 114 -188 189 0 0 0 chr2 229385005 229385026 -21302828 + (CA)n Simple_repeat Simple_repeat 2 22 0 1488 211 39 14 chr2 229385026 229385193 -21302661 + AluJo SINE Alu 114 292 -10 229 289 0 0 chr2 229385319 229385371 -21302483 - MIR SINE MIR 0 262 211 198 312 147 13 chr2 229385709 229385866 -21301988 - MIR SINE MIR -37 225 48 255 315 55 0 chr2 229387022 229387095 -21300759 - MER5A DNA MER1_type -3 186 110 192 163 0 0 chr2 229387122 229387165 -21300689 + T-rich Low_complexity Low_complexity 1 43 0 518 274 91 11 chr2 229387307 229387482 -21300372 + MER5A DNA MER1_type 1 189 0 261 0 0 0 chr2 229388928 229388957 -21298897 + (TG)n Simple_repeat Simple_repeat 1 29 0 1941 221 135 13 chr2 229389314 229390029 -21297825 - L1ME1 LINE L1 -29 6137 5263 328 191 32 48 chr2 229391120 229391201 -21296653 + L1MC3 LINE L1 7551 7632 -153 2144 133 3 7 chr2 229391201 229391502 -21296352 - AluSx SINE Alu -12 300 1 328 191 32 48 chr2 229391502 229391598 -21296256 + L1MC3 LINE L1 7632 7785 0 297 196 0 0 chr2 229392536 229392592 -21295262 - L2 LINE L2 -2 3311 3256 444 82 0 0 chr2 229392630 229392691 -21295163 + (TGAA)n Simple_repeat Simple_repeat 3 63 0 2360 77 0 13 chr2 229392792 229393092 -21294762 + AluY SINE Alu 1 296 -15 340 252 72 7 chr2 229393527 229393666 -21294188 - L1MC5 LINE L1 -78 7883 7736 10514 126 11 78 chr2 229393847 229394130 -21293724 - Tigger1 DNA MER2_type -510 1908 1607 1706 197 3 0 chr2 229394130 229394440 -21293414 + AluJb SINE Alu 2 312 0 10514 126 11 78 chr2 229394440 229395974 -21291880 - Tigger1 DNA MER2_type -811 1607 220 2235 124 39 39 chr2 229395974 229396337 -21291517 + THE1B LTR MaLR 2 364 0 10514 126 11 78 chr2 229396337 229396400 -21291454 - Tigger1 DNA MER2_type -2198 220 154 372 309 80 25 chr2 229396472 229396813 -21291041 + L1M1 LINE L1 5365 5734 -431 543 254 75 23 chr2 229396994 229397167 -21290687 + LTR33 LTR ERVL 9 190 -331 340 294 0 22 chr2 229397332 229397424 -21290430 + LTR33 LTR ERVL 432 521 0 402 21 0 0 chr2 229398075 229398122 -21289732 + (CA)n Simple_repeat Simple_repeat 2 48 0 254 304 11 22 chr2 229398953 229399045 -21288809 - MIR3 SINE MIR -9 199 109 899 241 10 5 chr2 229400061 229400260 -21287594 - MER2 DNA MER2_type -1 344 145 469 85 0 0 chr2 229400360 229400419 -21287435 + THE1B LTR MaLR 306 364 0 * 1034 181 67 5 chr2 229400419 229400620 -21287234 - Tigger1 DNA MER2_type -2203 215 2 435 330 34 6 chr2 229400718 229400897 -21286957 + MIR SINE MIR 79 262 0 2129 149 36 130 chr2 229402623 229403093 -21284761 - MSTB LTR MaLR 0 426 1 270 186 81 23 chr2 229403577 229403663 -21284191 - L1MC5 LINE L1 -35 7926 7836 208 91 61 0 chr2 229404527 229404560 -21283294 + (TATG)n Simple_repeat Simple_repeat 2 36 0 257 224 158 0 chr2 229405528 229405604 -21282250 + L2 LINE L2 2934 3021 -251 25 75 0 0 chr2 229405912 229405965 -21281889 + AT_rich Low_complexity Low_complexity 1 53 0 2198 130 0 0 chr2 229406239 229406546 -21281308 + AluSx SINE Alu 2 308 -4 402 253 12 0 chr2 229406562 229406645 -21281209 + MER5A DNA MER1_type 9 92 -97 200 308 56 84 chr2 229407048 229407191 -21280663 + L2 LINE L2 3134 3272 0 1818 150 0 14 chr2 229407805 229408085 -21279769 - AluSx SINE Alu -36 276 1 2217 105 7 7 chr2 229408097 229408401 -21279453 - AluSc SINE Alu -5 304 1 228 286 38 38 chr2 229408405 229408510 -21279344 + MIR SINE MIR 125 229 -33 1823 158 3 26 chr2 229408542 229408852 -21279002 - AluJo SINE Alu -7 305 3 304 351 73 66 chr2 229409151 229409592 -21278262 - L2 LINE L2 -22 3250 2807 2621 149 41 12 chr2 229409621 229410037 -21277817 + MSTA LTR MaLR 1 428 0 2881 108 0 11 chr2 229410089 229410467 -21277387 - THE1C LTR MaLR -1 374 1 742 162 0 0 chr2 229411013 229411124 -21276730 + FLAM_C SINE Alu 1 111 -32 201 143 0 0 chr2 229411154 229411189 -21276665 + (CATA)n Simple_repeat Simple_repeat 2 36 0 261 0 0 0 chr2 229412666 229412695 -21275159 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 387 366 20 8 chr2 229412786 229413032 -21274822 - L2 LINE L2 -869 2445 2197 463 283 177 16 chr2 229413095 229413474 -21274380 - MLT1L LTR MaLR 0 615 73 201 147 0 0 chr2 229413745 229413779 -21274075 + (A)n Simple_repeat Simple_repeat 1 34 0 210 320 0 0 chr2 229414982 229415060 -21272794 + GA-rich Low_complexity Low_complexity 2 79 0 1843 175 76 54 chr2 229415164 229415587 -21272267 - MSTB1 LTR MaLR 0 432 1 842 202 55 63 chr2 229415617 229415855 -21271999 - L1MA9 LINE L1 -193 6119 5884 340 138 0 0 chr2 229415854 229415912 -21271942 + L1MA8 LINE L1 6110 6167 -124 * 411 122 146 0 chr2 229415994 229416076 -21271778 + L1MA5A LINE L1 6200 6293 -4 1587 189 7 26 chr2 229416258 229416560 -21271294 + AluJb SINE Alu 1 296 -16 230 268 31 10 chr2 229416761 229416858 -21270996 + (TCTCTG)n Simple_repeat Simple_repeat 3 101 0 348 295 253 11 chr2 229416983 229417173 -21270681 + MIR SINE MIR 1 236 -26 223 274 161 0 chr2 229418151 229418213 -21269641 - MIR3 SINE MIR -53 155 84 389 191 87 43 chr2 229418964 229419079 -21268775 - MIR SINE MIR -57 205 86 498 316 29 0 chr2 229419530 229419669 -21268185 - MER115 DNA AcHobo -491 202 60 1285 243 137 40 chr2 229419824 229420428 -21267426 + L2 LINE L2 2375 3040 -273 22 0 0 0 chr2 229421372 229421394 -21266460 + AT_rich Low_complexity Low_complexity 1 22 0 976 202 0 0 chr2 229421699 229421872 -21265982 + FRAM SINE Alu 1 173 -3 304 290 70 50 chr2 229421876 229421972 -21265882 - L1ME4a LINE L1 -83 6038 5945 434 34 79 0 chr2 229421978 229422067 -21265787 + (TA)n Simple_repeat Simple_repeat 2 97 0 2109 117 3 7 chr2 229422067 229422351 -21265503 - AluSq SINE Alu -28 285 1 304 290 70 50 chr2 229422351 229422554 -21265300 - L1ME4a LINE L1 -176 5945 5733 21 0 0 0 chr2 229473359 229473380 -21214474 + AT_rich Low_complexity Low_complexity 1 21 0 198 224 13 92 chr2 229477025 229477101 -21210753 - MIR SINE MIR -108 100 31 21 36 0 0 chr2 229479757 229479785 -21208069 + AT_rich Low_complexity Low_complexity 1 28 0 462 241 84 42 chr2 229480112 229480278 -21207576 - MIR SINE MIR -26 236 64 2148 113 3 0 chr2 229480617 229480952 -21206902 + AluSx SINE Alu 1 336 0 285 269 83 28 chr2 229480952 229481060 -21206794 - MLT1K LTR MaLR -86 502 389 247 288 38 12 chr2 229481438 229481518 -21206336 - MIR SINE MIR -64 144 63 494 170 50 0 chr2 229481753 229481853 -21206001 + L1MB7 LINE L1 5457 5561 -623 2251 147 81 5 chr2 229481859 229482267 -21205587 + L1MB7 LINE L1 5686 6124 -60 398 143 38 19 chr2 229482269 229482374 -21205480 + (TAGA)n Simple_repeat Simple_repeat 4 110 0 393 345 18 0 chr2 229482378 229482488 -21205366 - L2 LINE L2 -5 3308 3197 384 317 85 15 chr2 229484270 229484469 -21203385 + MIR SINE MIR 2 214 -48 1131 78 0 0 chr2 229484474 229484628 -21203226 + L1PA8 LINE L1 6019 6172 0 228 204 23 0 chr2 229485155 229485199 -21202655 + L2 LINE L2 3251 3295 -18 1277 217 64 47 chr2 229485347 229485706 -21202148 - MLT1A2 LTR MaLR -6 368 4 2104 132 6 16 chr2 229486794 229487105 -21200749 - AluSq SINE Alu -4 309 2 406 294 51 38 chr2 229487398 229487562 -21200292 + MIR SINE MIR 20 191 -63 2273 103 0 0 chr2 229487906 229488206 -21199648 + AluSx SINE Alu 1 300 -12 218 308 51 26 chr2 229488604 229488682 -21199172 - L2 LINE L2 -65 3248 3169 2317 61 3 55 chr2 229488965 229489292 -21198562 + AluY SINE Alu 1 310 -1 1833 176 0 19 chr2 229489871 229490183 -21197671 - AluJo SINE Alu -6 306 1 360 0 0 0 chr2 229491043 229491083 -21196771 + (TG)n Simple_repeat Simple_repeat 1 40 0 2354 98 0 0 chr2 229491942 229492248 -21195606 - AluSg1 SINE Alu -1 308 3 2245 91 7 16 chr2 229492250 229492559 -21195295 - AluSx SINE Alu -6 306 1 1022 127 13 0 chr2 229493184 229493445 -21194409 + AluSg/x SINE Alu 158 420 0 2128 162 53 2 chr2 229493471 229493658 -21194196 + MLT2D LTR ERVL 1 177 -237 336 83 0 0 chr2 229493658 229493706 -21194148 + (TAA)n Simple_repeat Simple_repeat 1 48 0 2128 162 53 2 chr2 229493706 229493877 -21193977 + MLT2D LTR ERVL 177 338 -76 324 0 0 0 chr2 229493877 229493913 -21193941 + (CA)n Simple_repeat Simple_repeat 2 37 0 207 0 0 0 chr2 229493912 229493935 -21193919 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 2128 162 53 2 chr2 229493913 229493969 -21193885 + MLT2D LTR ERVL 338 414 0 256 257 18 9 chr2 229494885 229494994 -21192860 - Charlie7 DNA MER1_type -48 2564 2455 206 350 43 0 chr2 229496215 229496332 -21191522 - MIR SINE MIR -110 152 31 566 271 98 24 chr2 229497355 229497650 -21190204 - L1MC4a LINE L1 -1875 5933 5617 280 336 22 59 chr2 229498323 229498484 -21189370 - MIR SINE MIR -37 171 15 3791 118 8 0 chr2 229498537 229499060 -21188794 - MER1A DNA MER1_type 0 527 1 571 344 83 0 chr2 229502644 229502885 -21184969 - MIR SINE MIR 0 262 2 951 69 0 0 chr2 229503672 229503803 -21184051 + MLT2A2 LTR ERVL 1 131 -322 371 91 18 0 chr2 229503803 229503858 -21183996 - MLT2A1 LTR ERVL -247 197 142 308 121 52 0 chr2 229503874 229503932 -21183922 + MLT2B3 LTR ERVL 126 186 -258 1121 248 56 73 chr2 229503952 229504363 -21183491 + MLT2B3 LTR ERVL 151 554 0 2534 116 6 3 chr2 229504429 229504792 -21183062 - THE1B LTR MaLR 0 364 1 301 401 38 0 chr2 229504991 229505148 -21182706 - MIR SINE MIR -76 186 24 2013 126 67 14 chr2 229505377 229505733 -21182121 + THE1C LTR MaLR 1 375 0 1715 251 30 26 chr2 229505834 229506447 -21181407 + HsTC2a DNA Tc2 2 629 -115 2338 73 0 0 chr2 229508350 229508638 -21179216 + AluSp SINE Alu 1 288 -25 405 0 0 0 chr2 229508640 229508685 -21179169 + (TG)n Simple_repeat Simple_repeat 2 46 0 398 246 164 15 chr2 229509916 229510050 -21177804 + MIR SINE MIR 57 210 -52 2286 102 0 3 chr2 229510164 229510459 -21177395 - AluSx SINE Alu -18 294 1 2187 115 0 34 chr2 229511501 229511822 -21176032 - AluSq SINE Alu -3 310 1 181 162 81 0 chr2 229511862 229511899 -21175955 - L2 LINE L2 -3 3310 3271 1180 186 31 49 chr2 229511973 229512300 -21175554 - MER33 DNA MER1_type -15 309 1 441 309 100 107 chr2 229512300 229512549 -21175305 - L2 LINE L2 -12 3301 3052 2019 153 129 8 chr2 229512549 229512928 -21174926 - MSTA LTR MaLR 0 428 4 441 309 100 107 chr2 229512928 229513005 -21174849 - L2 LINE L2 -261 3052 2976 2338 185 34 18 chr2 229513005 229513502 -21174352 - MLT1D LTR MaLR 0 505 1 441 309 100 107 chr2 229513502 229513747 -21174107 - L2 LINE L2 -337 2976 2733 247 351 54 42 chr2 229513803 229513971 -21173883 - L2 LINE L2 -576 2738 2569 23 68 0 0 chr2 229516843 229516887 -21170967 + AT_rich Low_complexity Low_complexity 1 44 0 340 82 246 0 chr2 229516958 229517019 -21170835 - THE1A LTR MaLR -279 76 1 465 408 5 46 chr2 229517183 229517551 -21170303 - L2 LINE L2 -4 3268 2916 651 285 77 11 chr2 229517701 229517933 -21169921 - MIR SINE MIR 0 262 7 437 288 88 25 chr2 229518309 229518469 -21169385 + MIR3 SINE MIR 17 186 -22 185 324 0 14 chr2 229518968 229519042 -21168812 + MIR3 SINE MIR 129 201 -7 2287 115 0 10 chr2 229519438 229519750 -21168104 - AluSc SINE Alu 0 309 1 2454 127 69 7 chr2 229520214 229520480 -21167374 - MER65A LTR ERV1 0 445 142 369 0 0 0 chr2 229520480 229520521 -21167333 + (TG)n Simple_repeat Simple_repeat 2 42 0 2454 127 69 7 chr2 229520521 229520673 -21167181 - MER65A LTR ERV1 -303 142 1 278 256 0 33 chr2 229521226 229521316 -21166538 - L1ME LINE L1 -399 5722 5636 245 195 62 44 chr2 229521356 229521469 -21166385 - L1ME LINE L1 -2380 5428 5314 467 313 110 12 chr2 229523179 229523342 -21164512 + MER5A DNA MER1_type 9 187 -2 234 294 156 55 chr2 229523345 229523563 -21164291 + L2 LINE L2 3074 3313 0 2272 113 0 22 chr2 229523661 229523980 -21163874 + AluSx SINE Alu 1 312 0 219 314 47 0 chr2 229524103 229524189 -21163665 + L2 LINE L2 3163 3252 -61 2055 123 11 62 chr2 229526716 229527090 -21160764 + THE1A LTR MaLR 1 355 0 2167 264 149 55 chr2 229528041 229529063 -21158791 + L2 LINE L2 1785 2967 -346 2234 98 0 0 chr2 229529063 229529359 -21158495 + AluY SINE Alu 1 296 -15 2167 264 149 55 chr2 229529359 229529623 -21158231 + L2 LINE L2 2967 3205 -108 281 224 168 0 chr2 229529786 229529911 -21157943 - MER102a DNA MER1_type -9 321 176 544 258 47 19 chr2 229531117 229531312 -21156542 + LTR16C LTR ERVL 158 396 -95 1544 176 25 94 chr2 229531312 229531704 -21156150 + MLT1A1 LTR MaLR 1 365 0 544 258 47 19 chr2 229531704 229531803 -21156051 + LTR16C LTR ERVL 396 491 0 1123 283 82 29 chr2 229532266 229532751 -21155103 - MLT1J LTR MaLR 0 511 1 351 273 26 130 chr2 229534777 229534931 -21152923 - MER5A DNA MER1_type 0 189 41 182 176 14 40 chr2 229535269 229535343 -21152511 + (TA)n Simple_repeat Simple_repeat 2 73 0 804 216 20 20 chr2 229535475 229535674 -21152180 - MER20 DNA MER1_type -19 200 2 277 262 134 76 chr2 229535807 229535979 -21151875 - MIR SINE MIR -25 183 2 2254 117 0 0 chr2 229536478 229536769 -21151085 - AluSx SINE Alu -13 299 9 43684 33 22 1 chr2 229536976 229543003 -21144851 + L1PA2 LINE L1 1 6154 -1 29 28 0 0 chr2 229543026 229543062 -21144792 + AT_rich Low_complexity Low_complexity 1 36 0 279 402 37 0 chr2 229543117 229543224 -21144630 - L2 LINE L2 -25 3247 3137 453 194 62 16 chr2 229543345 229543474 -21144380 + L1ME4a LINE L1 5966 6100 -21 213 347 40 24 chr2 229543530 229543654 -21144200 - L2 LINE L2 -1477 1837 1712 865 319 95 2 chr2 229546085 229546525 -21141329 - L2 LINE L2 -279 3034 2554 4132 196 16 56 chr2 229546863 229547134 -21140720 - L1MB8 LINE L1 0 6178 5897 2043 149 0 0 chr2 229547134 229547430 -21140424 + AluSx SINE Alu 1 296 -16 4132 196 16 56 chr2 229547430 229548294 -21139560 - L1MB8 LINE L1 -281 5897 5088 29 0 0 0 chr2 229548905 229548934 -21138920 + AT_rich Low_complexity Low_complexity 1 29 0 1856 144 0 33 chr2 229548978 229549284 -21138570 - AluSx SINE Alu -16 296 1 1542 302 82 48 chr2 229549977 229550599 -21137255 + MER115 DNA AcHobo 51 693 0 500 220 61 15 chr2 229550622 229550754 -21137100 - L2 LINE L2 0 3313 3176 298 365 118 24 chr2 229550784 229551200 -21136654 - L2 LINE L2 0 3272 2818 272 321 73 36 chr2 229551634 229551799 -21136055 - MIR SINE MIR -26 236 66 548 286 148 9 chr2 229551872 229552082 -21135772 + MIR SINE MIR 18 256 -6 570 275 88 25 chr2 229553140 229553380 -21134474 + MER112 DNA MER1_type 1 255 -1 218 278 14 14 chr2 229553810 229553882 -21133972 + GA-rich Low_complexity Low_complexity 2 73 0 9185 38 6 0 chr2 229554005 229555827 -21132027 + L1PA4 LINE L1 4329 6155 0 4919 144 27 49 chr2 229555997 229556029 -21131825 - L1MC1 LINE L1 0 6333 6302 1835 77 4 0 chr2 229556029 229556263 -21131591 - AluY SINE Alu -1 310 76 4919 144 27 49 chr2 229556263 229557106 -21130748 - L1MC1 LINE L1 -31 6302 5477 410 45 0 45 chr2 229557127 229557193 -21130661 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 421 176 22 0 chr2 229557194 229557285 -21130569 + (TA)n Simple_repeat Simple_repeat 2 94 0 2979 99 5 5 chr2 229557285 229557689 -21130165 - MLT2A1 LTR ERVL -40 404 1 1473 163 0 5 chr2 229557689 229558000 -21129854 - L1MC1 LINE L1 -743 5403 5184 1877 165 0 9 chr2 229559735 229560050 -21127804 + AluJb SINE Alu 1 312 0 459 153 0 146 chr2 229560142 229560279 -21127575 - MIR SINE MIR -1 261 145 250 288 65 43 chr2 229560764 229560903 -21126951 - MIR SINE MIR -44 218 77 320 289 11 11 chr2 229560909 229560999 -21126855 - MER81 DNA DNA 0 114 25 380 143 14 0 chr2 229561144 229561214 -21126640 + GA-rich Low_complexity Low_complexity 4 74 0 21 0 0 0 chr2 229562012 229562033 -21125821 + AT_rich Low_complexity Low_complexity 1 21 0 617 338 211 5 chr2 229563440 229563881 -21123973 + L3 LINE CR1 1020 1551 -26 280 247 68 0 chr2 229564543 229564616 -21123238 - L1M3 LINE L1 -467 5704 5627 1630 222 43 31 chr2 229564622 229565036 -21122818 + L1 LINE L1 4615 5033 -1113 267 351 27 0 chr2 229565069 229565180 -21122674 + MER5B DNA MER1_type 63 176 -2 710 325 111 31 chr2 229565201 229565653 -21122201 + MLT1K LTR MaLR 91 578 -10 225 316 176 41 chr2 229565722 229566308 -21121546 + L2 LINE L2 1609 2273 -1041 431 319 135 69 chr2 229566310 229566598 -21121256 + L2 LINE L2 2965 3271 -1 23 54 0 0 chr2 229566788 229566825 -21121029 + AT_rich Low_complexity Low_complexity 1 37 0 1286 138 51 0 chr2 229566873 229567069 -21120785 - AluJb SINE Alu -23 289 84 2045 291 100 39 chr2 229567851 229567943 -21119911 + L2 LINE L2 2138 2223 -1090 2380 102 0 3 chr2 229567943 229568256 -21119598 - AluSq SINE Alu -1 312 1 2045 291 100 39 chr2 229568256 229569284 -21118570 + L2 LINE L2 2223 3312 -1 183 139 0 0 chr2 229569373 229569409 -21118445 + (TTA)n Simple_repeat Simple_repeat 2 37 0 458 279 22 22 chr2 229570478 229570614 -21117240 + MIR SINE MIR 127 262 0 197 204 0 41 chr2 229570695 229570744 -21117110 - L2 LINE L2 -102 3211 3165 3700 292 90 21 chr2 229570867 229573243 -21114611 + HERV16 LTR ERVL 755 3388 -1905 343 285 144 57 chr2 229573276 229573569 -21114285 + HERV16 LTR ERVL 3136 3402 -1594 2084 145 0 7 chr2 229573569 229573866 -21113988 + AluSx SINE Alu 1 295 -17 343 285 144 57 chr2 229573866 229574085 -21113769 + HERV16 LTR ERVL 3402 3693 -1303 447 170 104 0 chr2 229574102 229574208 -21113646 + MER63 DNA MER1_type 874 990 -70 4563 178 16 14 chr2 229574226 229575306 -21112548 + L1PA16 LINE L1 4403 5482 -684 2100 118 3 10 chr2 229575306 229575602 -21112252 + AluSq SINE Alu 1 294 -19 4563 178 16 14 chr2 229575602 229575725 -21112129 + L1PA16 LINE L1 5482 5603 -563 953 57 81 0 chr2 229575725 229575849 -21112005 - MER85 DNA T2_type -5 134 1 3680 137 20 11 chr2 229575849 229576411 -21111443 + L1PA16 LINE L1 5600 6166 0 370 210 126 42 chr2 229576493 229576636 -21111218 + L1ME4a LINE L1 5949 6103 -18 427 192 13 13 chr2 229576646 229576724 -21111130 + MER63 DNA MER1_type 981 1058 -3 216 269 0 0 chr2 229577856 229577908 -21109946 - MIR SINE MIR -73 135 84 1843 173 10 0 chr2 229579076 229579377 -21108477 + AluJo SINE Alu 1 304 -8 200 170 19 0 chr2 229579403 229579456 -21108398 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 2254 100 0 7 chr2 229579968 229580280 -21107574 + AluSg SINE Alu 1 310 0 1741 155 3 11 chr2 229580524 229580808 -21107046 + AluJo SINE Alu 1 282 -30 225 83 0 0 chr2 229580816 229580852 -21107002 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 2276 183 86 107 chr2 229581162 229581904 -21105950 + LTR8A LTR ERV1 1 727 0 203 306 59 12 chr2 229582101 229582186 -21105668 + L2 LINE L2 3161 3249 -23 706 201 28 0 chr2 229582313 229582457 -21105397 + MER45A DNA AcHobo 31 178 0 214 287 47 85 chr2 229582946 229583075 -21104779 - MIR SINE MIR -40 222 99 189 154 0 0 chr2 229583150 229583189 -21104665 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 293 252 58 106 chr2 229583189 229583415 -21104439 + L2 LINE L2 2267 2481 -833 216 246 15 31 chr2 229583479 229583544 -21104310 + L2 LINE L2 3249 3312 -1 1897 53 49 4 chr2 229583958 229584201 -21103653 - AluY SINE Alu -11 300 47 4451 63 6 0 chr2 229584546 229585082 -21102772 - L1PA7 LINE L1 -1 6153 5615 180 176 0 0 chr2 229585812 229585846 -21102008 + MIR SINE MIR 217 250 -12 37 52 0 0 chr2 229586385 229586443 -21101411 + AT_rich Low_complexity Low_complexity 1 58 0 2117 117 3 28 chr2 229586893 229587069 -21100785 - AluSx SINE Alu -3 309 143 2509 65 0 3 chr2 229587069 229587377 -21100477 - AluY SINE Alu -4 307 1 2117 117 3 28 chr2 229587377 229587517 -21100337 - AluSx SINE Alu -169 143 1 291 305 48 37 chr2 229588076 229588263 -21099591 - ERVL LTR ERVL -4324 1369 1142 1683 292 174 17 chr2 229589085 229589504 -21098350 + L2 LINE L2 1900 2252 -1062 306 0 0 0 chr2 229589504 229589538 -21098316 + (CA)n Simple_repeat Simple_repeat 1 34 0 1683 292 174 17 chr2 229589538 229590047 -21097807 + L2 LINE L2 2252 2974 -340 331 274 82 67 chr2 229590043 229590251 -21097603 + L2 LINE L2 3080 3290 -23 * 303 311 24 72 chr2 229590622 229590831 -21097023 - MIR SINE MIR -56 206 8 2250 119 0 0 chr2 229591387 229591689 -21096165 + AluSx SINE Alu 1 302 -10 2233 134 0 3 chr2 229591692 229592005 -21095849 + AluSx SINE Alu 1 312 0 238 200 0 53 chr2 229592724 229592799 -21095055 + L1MC4 LINE L1 6622 6692 -1350 361 283 0 73 chr2 229593120 229593311 -21094543 + MER104 DNA Tc2 1 177 -3 1159 148 18 79 chr2 229593759 229593988 -21093866 - MER20 DNA MER1_type -4 215 1 2323 90 0 7 chr2 229594104 229594403 -21093451 + AluSc SINE Alu 1 297 -12 24 0 0 0 chr2 229594475 229594499 -21093355 + AT_rich Low_complexity Low_complexity 1 24 0 425 302 172 19 chr2 229594734 229594949 -21092905 - MIR SINE MIR -1 261 14 328 368 54 11 chr2 229595323 229595508 -21092346 - MIR SINE MIR -50 212 20 186 319 77 11 chr2 229595722 229595813 -21092041 - MIR SINE MIR -63 199 103 182 256 44 11 chr2 229595988 229596078 -21091776 - MIR SINE MIR -66 196 104 503 213 96 84 chr2 229598021 229598260 -21089594 - L2 LINE L2 0 3313 3072 1807 169 31 107 chr2 229598262 229598747 -21089107 + MSTB2 LTR MaLR 10 457 0 1992 289 188 31 chr2 229598749 229599899 -21087955 - L2 LINE L2 -233 3080 1751 2183 215 10 40 chr2 229599917 229600033 -21087821 - L1ME1 LINE L1 -5 6161 6043 1776 166 0 38 chr2 229600033 229600347 -21087507 - AluJb SINE Alu -10 302 1 2183 215 10 40 chr2 229600347 229600752 -21087102 - L1ME1 LINE L1 -123 6043 5656 195 361 10 21 chr2 229601326 229601423 -21086431 + MIR SINE MIR 59 154 -108 384 22 0 0 chr2 229601592 229601637 -21086217 + (TG)n Simple_repeat Simple_repeat 1 45 0 2422 220 17 86 chr2 229601684 229602344 -21085510 + MER90 LTR ERV1 1 614 0 188 233 0 0 chr2 229603460 229603503 -21084351 + L2 LINE L2 3271 3313 0 190 265 84 72 chr2 229603546 229603629 -21084225 - MIR SINE MIR -109 99 16 207 0 0 0 chr2 229603956 229603979 -21083875 + (A)n Simple_repeat Simple_repeat 1 23 0 1102 50 0 28 chr2 229604138 229604279 -21083575 + L1PA5 LINE L1 6012 6148 -6 519 128 157 53 chr2 229604420 229604564 -21083290 + MER5A DNA MER1_type 4 168 -21 212 163 0 20 chr2 229605262 229605311 -21082543 + CT-rich Low_complexity Low_complexity 3 50 0 784 176 8 8 chr2 229606255 229606386 -21081468 - FLAM_A SINE Alu -2 131 1 26 0 0 0 chr2 229606395 229606421 -21081433 + AT_rich Low_complexity Low_complexity 1 26 0 2334 85 0 0 chr2 229606470 229606763 -21081091 - L1PA8 LINE L1 -11 6161 5869 1479 35 0 0 chr2 229606763 229606934 -21080920 + L1PA8 LINE L1 5691 5861 -311 234 323 77 39 chr2 229607346 229607501 -21080353 - MIR SINE MIR -13 249 89 241 375 29 0 chr2 229607583 229607719 -21080135 - MIR SINE MIR -13 249 110 355 211 0 67 chr2 229608092 229608182 -21079672 + L2 LINE L2 3180 3263 -50 527 284 179 5 chr2 229608743 229608961 -21078893 - MIR SINE MIR -1 261 6 946 204 42 23 chr2 229609001 229609441 -21078413 - Charlie4a DNA MER1_type -3 505 26 474 18 0 0 chr2 229611895 229611950 -21075904 + (TG)n Simple_repeat Simple_repeat 2 56 0 2508 50 0 7 chr2 229611985 229612286 -21075568 + AluY SINE Alu 1 299 -12 226 324 135 24 chr2 229614288 229614458 -21073396 + L3b LINE CR1 1178 1366 -217 197 172 0 103 chr2 229615028 229615086 -21072768 - L2 LINE L2 -3 3310 3259 844 142 0 0 chr2 229615139 229615252 -21072602 + FLAM_C SINE Alu 2 114 -19 252 0 0 0 chr2 229615254 229615282 -21072572 + (CA)n Simple_repeat Simple_repeat 1 28 0 377 241 27 86 chr2 229615293 229615480 -21072374 - L1ME4a LINE L1 0 6121 5946 275 250 22 22 chr2 229615483 229615575 -21072279 - L1ME4a LINE L1 -236 5885 5794 198 274 192 0 chr2 229615703 229615776 -21072078 - MIR SINE MIR -74 188 102 348 83 0 0 chr2 229615825 229615873 -21071981 + (TTAGGG)n Simple_repeat Simple_repeat 2 49 0 206 271 78 39 chr2 229616141 229616270 -21071584 - MIR SINE MIR -34 228 95 477 318 110 17 chr2 229616479 229616715 -21071139 - MIR SINE MIR -2 260 3 2063 170 23 20 chr2 229616844 229617197 -21070657 + MLT1A1 LTR MaLR 12 365 0 572 73 12 0 chr2 229617444 229617526 -21070328 + (TAGA)n Simple_repeat Simple_repeat 2 84 0 1772 161 3 20 chr2 229617669 229617973 -21069881 + AluSx SINE Alu 6 304 -8 2091 101 7 39 chr2 229618428 229618735 -21069119 - AluSg SINE Alu -13 297 1 209 375 0 10 chr2 229618760 229618864 -21068990 + L2 LINE L2 2688 2790 -524 976 110 0 0 chr2 229618927 229619054 -21068800 + AluSq/x SINE Alu 1 127 -186 241 348 95 34 chr2 229620021 229620432 -21067422 + L2 LINE L2 1365 1800 -1514 384 291 68 20 chr2 229620437 229620585 -21067269 - MER5A DNA MER1_type 0 189 35 575 336 75 23 chr2 229620602 229620869 -21066985 + L2 LINE L2 1807 2106 -1208 1248 210 128 63 chr2 229620869 229621235 -21066619 - MLT1B LTR MaLR 0 390 1 575 336 75 23 chr2 229621235 229621395 -21066459 + L2 LINE L2 2106 2256 -1058 709 264 59 46 chr2 229621697 229621936 -21065918 + MIR SINE MIR 21 262 0 362 207 6 63 chr2 229622033 229622172 -21065682 + L1MB8 LINE L1 6049 6183 -1 186 133 0 0 chr2 229622567 229622597 -21065257 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 2039 111 11 4 chr2 229622835 229623166 -21064688 - AluSc SINE Alu 0 333 1 26 0 0 0 chr2 229623169 229623195 -21064659 + AT_rich Low_complexity Low_complexity 1 26 0 885 264 38 29 chr2 229623205 229623622 -21064232 - L1MC5 LINE L1 -210 7751 7331 1101 176 29 10 chr2 229623626 229623831 -21064023 - LTR40b LTR ERVL -1 461 253 316 189 0 0 chr2 229623834 229623887 -21063967 - MER5B DNA MER1_type -125 53 1 191 339 17 61 chr2 229623887 229623996 -21063858 + L2 LINE L2 3194 3297 -16 493 237 118 38 chr2 229624021 229624207 -21063647 - MIR SINE MIR -57 205 5 386 232 60 93 chr2 229624320 229624471 -21063383 - MIR3 SINE MIR -16 192 47 2036 144 0 13 chr2 229624977 229625290 -21062564 + AluSg SINE Alu 1 309 -1 313 275 100 45 chr2 229625441 229625641 -21062213 - L2 LINE L2 0 3313 3103 207 326 0 0 chr2 229625715 229625764 -21062090 - L2 LINE L2 -1412 1902 1854 359 254 84 142 chr2 229626462 229626808 -21061046 + MLT1K LTR MaLR 21 346 -242 185 374 121 35 chr2 229627284 229627482 -21060372 - L2 LINE L2 -183 3089 2875 1491 74 5 35 chr2 229627719 229627922 -21059932 - THE1B LTR MaLR -167 197 1 493 208 54 15 chr2 229627980 229628110 -21059744 + Charlie1 DNA MER1_type 8 142 -2619 * 2977 189 38 15 chr2 229628109 229628590 -21059264 + Charlie1 DNA MER1_type 2084 2586 -175 1781 188 147 26 chr2 229628590 229629005 -21058849 + MLT1C LTR MaLR 1 465 -2 2977 189 38 15 chr2 229629005 229629184 -21058670 + Charlie1 DNA MER1_type 2586 2759 -2 297 315 10 12 chr2 229629261 229629375 -21058479 + MER5B DNA MER1_type 63 179 -10 23 33 0 0 chr2 229630093 229630123 -21057731 + AT_rich Low_complexity Low_complexity 1 30 0 464 325 102 35 chr2 229631265 229631607 -21056247 - MLT1K LTR MaLR -65 523 159 225 94 0 0 chr2 229633787 229633819 -21054035 + (GGA)n Simple_repeat Simple_repeat 2 33 0 241 322 83 16 chr2 229635133 229635254 -21052600 - MIR3 SINE MIR -72 136 8 1465 111 10 5 chr2 229636066 229636274 -21051580 - AluSg/x SINE Alu -2 308 100 313 65 87 0 chr2 229636415 229636461 -21051393 + MADE1 DNA Mariner 31 80 0 244 297 76 14 chr2 229636602 229636694 -21051160 + MER103 DNA DNA 3 109 -57 192 40 0 0 chr2 229636694 229636719 -21051135 + (TG)n Simple_repeat Simple_repeat 1 25 0 244 297 76 14 chr2 229636719 229636771 -21051083 + MER103 DNA DNA 109 156 -10 359 289 203 48 chr2 229636940 229637102 -21050752 + L2 LINE L2 2814 2950 -363 2894 10 0 0 chr2 229637102 229637412 -21050442 - AluYb8 SINE Alu -8 310 1 359 289 203 48 chr2 229637412 229637537 -21050317 + L2 LINE L2 2950 3054 -259 2925 96 0 3 chr2 229637537 229637902 -21049952 + THE1B LTR MaLR 1 364 0 359 289 203 48 chr2 229637902 229638017 -21049837 + L2 LINE L2 3054 3258 -55 244 111 37 0 chr2 229638029 229638083 -21049771 + (TA)n Simple_repeat Simple_repeat 2 57 0 25 0 0 0 chr2 229638209 229638234 -21049620 + AT_rich Low_complexity Low_complexity 1 25 0 423 284 39 0 chr2 229638632 229638787 -21049067 + MER103 DNA DNA 4 164 -2 2321 90 0 0 chr2 229638973 229639273 -21048581 + AluY SINE Alu 1 300 -11 216 97 0 0 chr2 229639273 229639304 -21048550 + (TA)n Simple_repeat Simple_repeat 1 31 0 2980 208 81 11 chr2 229639311 229640137 -21047717 + L1ME1 LINE L1 5278 6161 -5 252 0 0 0 chr2 229640276 229640304 -21047550 + (CA)n Simple_repeat Simple_repeat 2 29 0 300 111 0 0 chr2 229640422 229640467 -21047387 + (TG)n Simple_repeat Simple_repeat 2 46 0 331 293 134 6 chr2 229640489 229640630 -21047224 + L2 LINE L2 2589 2753 -561 237 65 0 0 chr2 229640630 229640661 -21047193 + (TG)n Simple_repeat Simple_repeat 2 32 0 331 293 134 6 chr2 229640661 229640676 -21047178 + L2 LINE L2 2753 2765 -549 267 93 0 0 chr2 229640677 229640720 -21047134 + (TC)n Simple_repeat Simple_repeat 1 43 0 1035 311 76 15 chr2 229640804 229641243 -21046611 - L2 LINE L2 -257 3056 2589 614 349 46 4 chr2 229641268 229641509 -21046345 + MIR SINE MIR 11 261 -1 524 274 39 6 chr2 229641836 229642015 -21045839 + LTR16C LTR ERVL 307 491 0 472 277 104 34 chr2 229642368 229642677 -21045177 + MLT1G1 LTR MaLR 1 291 -299 448 220 45 15 chr2 229642744 229642876 -21044978 + MLT1G1 LTR MaLR 403 538 -17 885 214 5 11 chr2 229643929 229644116 -21043738 - MER5A DNA MER1_type 0 189 4 433 284 28 28 chr2 229644486 229644662 -21043192 + MLT1K LTR MaLR 213 388 -200 966 241 206 21 chr2 229644663 229645116 -21042738 + MLT1G LTR MaLR 2 507 -83 417 223 29 86 chr2 229645223 229645398 -21042456 + MLT1K LTR MaLR 412 576 -12 23 0 0 0 chr2 229645865 229645888 -21041966 + AT_rich Low_complexity Low_complexity 1 23 0 5021 46 0 0 chr2 229647049 229647657 -21040197 - L1PA4 LINE L1 -3 6152 5545 1763 171 44 44 chr2 229648129 229648514 -21039340 + MLT1B LTR MaLR 1 385 -5 24 32 0 0 chr2 229649269 229649300 -21038554 + AT_rich Low_complexity Low_complexity 1 31 0 491 280 38 19 chr2 229651862 229652073 -21035781 + LTR16C LTR ERVL 274 488 -3 216 0 0 0 chr2 229652722 229652746 -21035108 + (CA)n Simple_repeat Simple_repeat 2 25 0 208 125 50 0 chr2 229652786 229652826 -21035028 + A-rich Low_complexity Low_complexity 4 45 0 1257 97 56 0 chr2 229654466 229654661 -21033193 + L1PA10 LINE L1 5960 6165 -3 37 23 0 0 chr2 229654719 229654763 -21033091 + AT_rich Low_complexity Low_complexity 1 44 0 33 73 0 0 chr2 229655882 229655950 -21031904 + AT_rich Low_complexity Low_complexity 1 68 0 463 268 6 51 chr2 229656082 229656239 -21031615 + MER5B DNA MER1_type 6 155 -23 381 350 43 18 chr2 229656299 229656462 -21031392 + MIR3 SINE MIR 3 169 -39 189 74 0 0 chr2 229657172 229657199 -21030655 + (TA)n Simple_repeat Simple_repeat 2 28 0 2335 94 17 0 chr2 229659077 229659374 -21028480 - AluSq SINE Alu -11 302 1 424 307 22 48 chr2 229660040 229660411 -21027443 + L1MC4 LINE L1 5266 5626 -2182 388 263 68 58 chr2 229660484 229660674 -21027180 + L1MC4 LINE L1 5768 5959 -1849 197 286 61 0 chr2 229660813 229660862 -21026992 + L2 LINE L2 3038 3089 -183 324 364 64 0 chr2 229662012 229662152 -21025702 + MIR3 SINE MIR 34 182 -26 5517 146 37 7 chr2 229663661 229664676 -21023178 + L1MC1 LINE L1 5288 6333 0 2002 246 75 25 chr2 229664819 229665514 -21022340 - L1ME3A LINE L1 -23 6147 5418 654 95 0 0 chr2 229665768 229665863 -21021991 + (TAGA)n Simple_repeat Simple_repeat 3 97 0 1519 173 4 4 chr2 229665865 229666131 -21021723 - MLT1A1 LTR MaLR -6 359 94 2002 148 0 7 chr2 229666377 229666675 -21021179 - AluSg SINE Alu -14 296 1 2022 149 3 0 chr2 229667178 229667487 -21020367 - AluSx SINE Alu -2 310 1 583 92 0 0 chr2 229667737 229667813 -21020041 + AluS SINE Alu 12 87 -225 2061 150 0 0 chr2 229668350 229668637 -21019217 + AluSx SINE Alu 1 287 -25 1229 88 0 11 chr2 229668647 229668829 -21019025 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 640 129 16 16 chr2 229668829 229668953 -21018901 + GA-rich Low_complexity Low_complexity 1 124 0 257 0 30 0 chr2 229669034 229669067 -21018787 + (TAGA)n Simple_repeat Simple_repeat 2 35 0 328 290 0 11 chr2 229669067 229669160 -21018694 + L1MC4 LINE L1 6616 6707 -1335 312 179 24 24 chr2 229669375 229669459 -21018395 + L1ME3A LINE L1 5873 5956 -214 25 0 0 0 chr2 229669545 229669570 -21018284 + AT_rich Low_complexity Low_complexity 1 25 0 957 256 26 82 chr2 229669571 229670111 -21017743 - L1MC4 LINE L1 -28 8014 7505 3458 56 7 5 chr2 229670321 229670770 -21017084 + L1PA8 LINE L1 5723 6172 0 22 70 0 0 chr2 229671690 229671733 -21016121 + AT_rich Low_complexity Low_complexity 1 43 0 744 200 0 0 chr2 229672680 229672805 -21015049 + FLAM_A SINE Alu 1 125 -8 24 0 0 0 chr2 229672809 229672833 -21015021 + AT_rich Low_complexity Low_complexity 1 24 0 426 300 114 32 chr2 229673253 229673533 -21014321 + L2 LINE L2 3011 3313 0 2313 93 0 0 chr2 229674310 229674600 -21013254 + AluSx SINE Alu 16 305 -7 2392 95 0 0 chr2 229676031 229676326 -21011528 + AluSp SINE Alu 1 295 -18 1570 190 10 24 chr2 229676734 229677043 -21010811 + AluJo SINE Alu 1 305 0 206 288 50 58 chr2 229677079 229677218 -21010636 - MIR SINE MIR 0 262 125 1527 191 14 24 chr2 229677638 229677946 -21009908 + AluJo SINE Alu 1 305 0 337 319 71 38 chr2 229677982 229678192 -21009662 - MIR SINE MIR 0 262 46 2246 126 22 25 chr2 229678881 229679246 -21008608 - THE1B LTR MaLR 0 364 1 283 273 23 55 chr2 229679285 229679413 -21008441 + L1ME LINE L1 5695 5818 -303 702 227 61 0 chr2 229681833 229682062 -21005792 + MER33 DNA MER1_type 40 282 -42 669 221 83 0 chr2 229682065 229682210 -21005644 + FAM SINE Alu 2 158 -17 228 176 20 0 chr2 229682230 229682281 -21005573 + MER33 DNA MER1_type 311 362 -1 241 286 86 43 chr2 229682361 229682501 -21005353 + MIR SINE MIR 78 223 -39 23 0 0 0 chr2 229682511 229682534 -21005320 + AT_rich Low_complexity Low_complexity 1 23 0 1128 160 23 27 chr2 229683365 229683584 -21004270 + MER20 DNA MER1_type 1 218 -1 471 282 51 13 chr2 229684129 229684285 -21003569 + MIR SINE MIR 89 250 -12 193 301 47 88 chr2 229684808 229685001 -21002853 - MIR SINE MIR -45 217 33 252 0 0 0 chr2 229685733 229685761 -21002093 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2001 115 0 44 chr2 229686452 229686768 -21001086 + AluSq SINE Alu 1 303 0 21 0 0 0 chr2 229687691 229687712 -21000142 + AT_rich Low_complexity Low_complexity 1 21 0 613 103 0 86 chr2 229687789 229687905 -20999949 - L1MA3 LINE L1 0 6305 6200 354 23 0 0 chr2 229688930 229688973 -20998881 + (TG)n Simple_repeat Simple_repeat 1 43 0 3464 248 59 16 chr2 229689059 229690239 -20997615 - L1MEc LINE L1 -4933 1463 233 262 203 153 0 chr2 229690272 229690331 -20997523 - L1MEc LINE L1 -6293 103 36 275 280 11 11 chr2 229690528 229690621 -20997233 + MLT1L LTR MaLR 521 613 -2 365 345 76 6 chr2 229690638 229690809 -20997045 - MIR SINE MIR -52 210 28 272 227 68 83 chr2 229691040 229691140 -20996714 + L3 LINE CR1 1346 1445 -132 2220 104 0 16 chr2 229691140 229691448 -20996406 - AluSq SINE Alu -10 303 1 272 227 68 83 chr2 229691448 229691479 -20996375 + L3 LINE CR1 1445 1475 -102 180 389 50 29 chr2 229691748 229691887 -20995967 - L2 LINE L2 -5 3267 3126 1458 181 145 22 chr2 229692258 229692672 -20995182 + Charlie4a DNA MER1_type 43 507 -1 26 0 0 0 chr2 229692839 229692865 -20994989 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 229693390 229693411 -20994443 + AT_rich Low_complexity Low_complexity 1 21 0 1017 106 0 0 chr2 229694909 229695041 -20992813 + AluSq/x SINE Alu 1 132 -181 1996 135 0 0 chr2 229695044 229695325 -20992529 + AluSq SINE Alu 1 281 -32 225 0 0 0 chr2 229695326 229695351 -20992503 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 575 259 42 42 chr2 229695756 229695922 -20991932 + MIR SINE MIR 83 248 -14 337 245 102 10 chr2 229696110 229696208 -20991646 - L2 LINE L2 -3 3310 3204 252 149 0 0 chr2 229696310 229696357 -20991497 - AluSx SINE Alu 0 302 256 1019 157 6 17 chr2 229696357 229696529 -20991325 - AluSx SINE Alu -142 170 1 732 256 37 41 chr2 229696886 229697155 -20990699 + Charlie7 DNA MER1_type 58 325 -2287 1045 152 47 8 chr2 229697176 229697524 -20990330 - MSTA LTR MaLR 0 428 1 422 233 26 0 chr2 229697528 229697644 -20990210 + Charlie7 DNA MER1_type 346 464 -2148 4577 134 5 7 chr2 229697656 229698401 -20989453 + L1PB2 LINE L1 5406 6149 -2 999 257 46 29 chr2 229698540 229698886 -20988968 + Charlie7 DNA MER1_type 529 880 -1732 812 235 68 124 chr2 229698896 229699427 -20988427 + Charlie7 DNA MER1_type 1320 1820 -792 10211 35 0 0 chr2 229699443 229701245 -20986609 + L1PA5 LINE L1 4146 5947 -208 1615 81 4 13 chr2 229701356 229701592 -20986262 + L1PA5 LINE L1 5920 6153 -1 1026 264 46 6 chr2 229701626 229701975 -20985879 + Charlie7 DNA MER1_type 1835 2197 -415 42915 32 21 1 chr2 229701989 229708020 -20979834 - L1PA2 LINE L1 0 6155 2 667 251 23 75 chr2 229708021 229708367 -20979487 + Charlie7 DNA MER1_type 2182 2509 -103 2336 60 4 0 chr2 229708387 229708724 -20979130 + AluY SINE Alu 1 338 0 486 329 0 19 chr2 229708847 229709005 -20978849 + MER5A DNA MER1_type 4 158 -31 207 0 0 0 chr2 229709005 229709028 -20978826 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2274 55 4 0 chr2 229709031 229709304 -20978550 - AluY SINE Alu -35 276 3 184 244 0 0 chr2 229709306 229709347 -20978507 + MER5A DNA MER1_type 146 186 -3 1480 179 36 4 chr2 229710530 229710810 -20977044 - MLT2C1 LTR ERVL -108 289 1 350 275 0 22 chr2 229710864 229710955 -20976899 - MIR SINE MIR -111 151 63 331 277 0 0 chr2 229711206 229711289 -20976565 + MIR SINE MIR 32 114 -148 791 201 107 17 chr2 229711299 229711533 -20976321 + MIR SINE MIR 8 262 0 201 291 92 64 chr2 229711534 229711675 -20976179 + MIR SINE MIR 116 260 -2 1330 161 54 93 chr2 229712054 229712440 -20975414 + MER58D DNA MER1_type 16 386 0 332 306 18 9 chr2 229713258 229713369 -20974485 - L1MC4 LINE L1 -1340 6702 6591 291 313 31 0 chr2 229714557 229714685 -20973169 + (TATATG)n Simple_repeat Simple_repeat 6 137 0 2543 119 56 15 chr2 229714751 229715162 -20972692 - MSTA LTR MaLR 0 428 1 916 247 53 16 chr2 229715311 229715554 -20972300 + LTR16A1 LTR ERVL 206 457 0 1805 206 37 2 chr2 229716177 229716579 -20971275 + L1MB5 LINE L1 5759 6174 0 850 302 62 21 chr2 229717490 229718006 -20969848 + HAL1b LINE L1 61 597 -751 222 120 0 60 chr2 229718236 229718286 -20969568 + (TAA)n Simple_repeat Simple_repeat 2 48 0 423 253 11 28 chr2 229718577 229718759 -20969095 + (TA)n Simple_repeat Simple_repeat 2 180 0 1570 241 35 108 chr2 229718794 229719773 -20968081 + L1MC5 LINE L1 6676 7488 -473 458 302 27 7 chr2 229719778 229719927 -20967927 - LTR16A LTR ERVL -11 439 288 892 246 98 28 chr2 229720016 229720301 -20967553 - MLT1E LTR MaLR -276 317 13 305 366 34 17 chr2 229720511 229720686 -20967168 + L1ME3A LINE L1 5993 6170 0 1082 119 34 0 chr2 229720744 229720920 -20966934 - L1MA3 LINE L1 0 6305 6124 2531 111 26 3 chr2 229720920 229721306 -20966548 - L1MA2 LINE L1 -229 6075 5681 216 0 0 0 chr2 229721747 229721771 -20966083 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 780 294 143 51 chr2 229721864 229722411 -20965443 - MLT1L LTR MaLR -4 611 15 216 0 0 0 chr2 229722427 229722451 -20965403 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 318 173 0 27 chr2 229722454 229722529 -20965325 - LTR30 LTR ERV1 -98 624 552 2146 143 8 27 chr2 229722697 229723068 -20964786 - THE1B LTR MaLR 0 364 1 819 296 121 34 chr2 229723468 229723556 -20964298 + L2 LINE L2 2578 2657 -656 2492 103 27 8 chr2 229723556 229723924 -20963930 + THE1C LTR MaLR 1 375 0 819 296 121 34 chr2 229723924 229724491 -20963363 + L2 LINE L2 2657 3296 -17 25 31 0 0 chr2 229724515 229724547 -20963307 + AT_rich Low_complexity Low_complexity 1 32 0 1674 149 114 6 chr2 229724723 229725038 -20962816 - MLT1A1 LTR MaLR -16 349 1 213 39 0 0 chr2 229726773 229726799 -20961055 + (TTG)n Simple_repeat Simple_repeat 2 27 0 332 222 13 55 chr2 229729579 229729703 -20958151 + L1MC4a LINE L1 5597 5718 -403 210 192 27 14 chr2 229729933 229730006 -20957848 + (TA)n Simple_repeat Simple_repeat 1 74 0 1005 289 55 107 chr2 229730195 229730426 -20957428 - L2 LINE L2 -345 2969 2728 270 116 0 0 chr2 229730426 229730469 -20957385 + (CA)n Simple_repeat Simple_repeat 2 44 0 1005 289 55 107 chr2 229730469 229730947 -20956907 - L2 LINE L2 -586 2728 2297 449 173 13 0 chr2 229730948 229731023 -20956831 + MLT1I LTR MaLR 78 153 -256 991 63 0 14 chr2 229731199 229731341 -20956513 + (AATAG)n Simple_repeat Simple_repeat 5 144 0 315 304 101 14 chr2 229732018 229732156 -20955698 - MIR SINE MIR -65 197 48 312 297 95 7 chr2 229732229 229732377 -20955477 + L1MC4a LINE L1 5705 5865 -1943 2108 118 19 32 chr2 229732609 229732974 -20954880 + AluSx SINE Alu 1 361 0 1064 236 67 57 chr2 229733024 229733427 -20954427 + MLT1I LTR MaLR 1 407 -2 1390 203 11 4 chr2 229733439 229733700 -20954154 + AluJo SINE Alu 16 278 -34 648 0 0 0 chr2 229733701 229733773 -20954081 + (TC)n Simple_repeat Simple_repeat 2 73 0 297 0 0 0 chr2 229733772 229733805 -20954049 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 967 178 0 0 chr2 229733807 229733959 -20953895 + FRAM SINE Alu 1 152 -14 309 247 34 11 chr2 229734081 229734170 -20953684 - L2 LINE L2 0 3313 3223 1538 48 0 5 chr2 229734170 229734356 -20953498 + AluY SINE Alu 1 185 -126 480 91 0 0 chr2 229734356 229734422 -20953432 + AluY SINE Alu 235 300 -12 899 183 183 0 chr2 229734596 229734798 -20953056 - MER8 DNA MER2_type 0 239 1 369 291 87 58 chr2 229736468 229736674 -20951180 - MIR SINE MIR -30 232 21 336 337 119 6 chr2 229736701 229737016 -20950838 + L2 LINE L2 2625 2982 -290 186 250 0 23 chr2 229737284 229737328 -20950526 - MIR SINE MIR -150 58 16 328 207 12 24 chr2 229737504 229737586 -20950268 - MLT1L LTR MaLR -516 99 19 2354 85 0 13 chr2 229737671 229737978 -20949876 + AluY SINE Alu 1 303 -8 2118 131 0 0 chr2 229738431 229738722 -20949132 + AluSx SINE Alu 12 302 -10 322 306 109 73 chr2 229738869 229739117 -20948737 - MIR SINE MIR -2 260 4 326 260 78 94 chr2 229739351 229739543 -20948311 + L2 LINE L2 2686 2874 -440 4722 144 51 25 chr2 229739717 229740920 -20946934 - L1PA16 LINE L1 -1 6165 4927 271 320 58 65 chr2 229740932 229741210 -20946644 + L2 LINE L2 1345 1620 -1694 1655 211 32 37 chr2 229741223 229741688 -20946166 - MLT1C LTR MaLR -4 463 1 722 329 58 33 chr2 229741738 229742219 -20945635 + L2 LINE L2 2187 2679 -635 229 327 52 65 chr2 229742627 229742780 -20945074 + L2 LINE L2 2720 2870 -444 289 327 41 54 chr2 229743621 229743815 -20944039 + MIR SINE MIR 17 206 -56 243 88 0 0 chr2 229744082 229744116 -20943738 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 26 30 0 0 chr2 229744304 229744337 -20943517 + AT_rich Low_complexity Low_complexity 1 33 0 1985 134 20 0 chr2 229744339 229744631 -20943223 + AluSq SINE Alu 1 298 -15 1912 178 0 48 chr2 229746038 229746431 -20941423 - MLT1A2 LTR MaLR 0 374 1 431 336 48 4 chr2 229746473 229746702 -20941152 + LTR33 LTR ERVL 23 261 -260 365 187 60 45 chr2 229746781 229746915 -20940939 + LTR33 LTR ERVL 380 515 -6 2146 100 3 7 chr2 229747647 229747938 -20939916 - AluSx SINE Alu -2 310 21 189 0 0 0 chr2 229749116 229749137 -20938717 + (TC)n Simple_repeat Simple_repeat 2 22 0 401 265 0 0 chr2 229749464 229749547 -20938307 - L2 LINE L2 0 3272 3190 459 318 30 25 chr2 229750759 229750957 -20936897 + MIR SINE MIR 13 211 -51 702 240 20 5 chr2 229751151 229751351 -20936503 + MER3 DNA MER1_type 5 207 -2 454 250 133 36 chr2 229751402 229751598 -20936256 + MIR SINE MIR 2 216 -46 201 271 17 0 chr2 229751689 229751748 -20936106 + L2 LINE L2 3236 3295 -18 234 153 56 28 chr2 229751753 229751825 -20936029 + GA-rich Low_complexity Low_complexity 4 77 0 22 0 0 0 chr2 229751875 229751897 -20935957 + AT_rich Low_complexity Low_complexity 1 22 0 252 86 0 0 chr2 229753419 229753454 -20934400 + (CA)n Simple_repeat Simple_repeat 2 36 0 204 211 40 13 chr2 229754773 229754849 -20933005 + GA-rich Low_complexity Low_complexity 6 83 0 212 232 18 71 chr2 229755394 229755450 -20932404 + L2 LINE L2 3242 3294 -19 396 0 0 0 chr2 229755522 229755566 -20932288 + (TA)n Simple_repeat Simple_repeat 2 45 0 28 48 0 0 chr2 229756577 229756619 -20931235 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr2 229759594 229759625 -20928229 + AT_rich Low_complexity Low_complexity 1 31 0 357 125 0 0 chr2 229760475 229760531 -20927323 + (TA)n Simple_repeat Simple_repeat 1 56 0 1248 212 6 100 chr2 229762087 229762408 -20925446 + AluSp SINE Alu 1 291 -22 1833 173 14 0 chr2 229763384 229763673 -20924181 - AluJb SINE Alu -19 293 1 182 341 136 11 chr2 229763813 229763901 -20923953 - MIR SINE MIR -132 130 32 381 242 53 0 chr2 229764246 229764341 -20923513 + MER103 DNA DNA 2 101 -65 309 26 0 0 chr2 229765128 229765166 -20922688 + (CA)n Simple_repeat Simple_repeat 2 39 0 207 257 76 67 chr2 229768462 229768567 -20919287 - L3 LINE CR1 -18 1559 1454 243 61 0 0 chr2 229769202 229769235 -20918619 + (CA)n Simple_repeat Simple_repeat 2 34 0 211 372 44 18 chr2 229769934 229770047 -20917807 + MIR SINE MIR 23 138 -70 2026 94 40 0 chr2 229774916 229775193 -20912661 - AluSx SINE Alu -14 298 11 544 304 29 29 chr2 229778094 229778301 -20909553 + MIR SINE MIR 54 260 -2 231 233 60 160 chr2 229779534 229779684 -20908170 - MIR3 SINE MIR -42 166 32 1758 155 14 40 chr2 229779818 229780114 -20907740 + AluJb SINE Alu 1 288 -24 1645 177 0 21 chr2 229781168 229781473 -20906381 + AluJo SINE Alu 10 308 0 23 78 0 0 chr2 229781624 229781675 -20906179 + AT_rich Low_complexity Low_complexity 1 51 0 227 198 33 50 chr2 229781715 229781836 -20906018 + (TTATA)n Simple_repeat Simple_repeat 4 122 0 1725 191 28 0 chr2 229782408 229782696 -20905158 + AluJb SINE Alu 1 296 -16 2699 34 0 3 chr2 229782749 229783069 -20904785 + L1PA7 LINE L1 5823 6141 -13 2322 100 3 0 chr2 229783081 229783381 -20904473 + AluSg SINE Alu 1 301 -9 669 237 29 23 chr2 229784119 229784292 -20903562 + MIR SINE MIR 71 244 -18 294 211 0 0 chr2 229784847 229784904 -20902950 + MER31A LTR ERV1 357 413 -72 22 0 0 0 chr2 229785373 229785395 -20902459 + AT_rich Low_complexity Low_complexity 1 22 0 466 245 7 22 chr2 229785603 229785742 -20902112 - MER45A DNA AcHobo -34 144 8 26 64 0 0 chr2 229786754 229786801 -20901053 + AT_rich Low_complexity Low_complexity 1 47 0 761 227 23 23 chr2 229787025 229787201 -20900653 - MER5A DNA MER1_type 0 189 14 331 274 170 0 chr2 229787744 229787850 -20900004 + L2 LINE L2 3187 3310 -3 870 147 0 0 chr2 229788760 229788889 -20898965 - FLAM_A SINE Alu -4 138 10 355 254 174 14 chr2 229789636 229789774 -20898080 - MIR SINE MIR -80 182 23 318 50 0 0 chr2 229789826 229789866 -20897988 + (CA)n Simple_repeat Simple_repeat 1 40 0 25 31 0 0 chr2 229791973 229792005 -20895849 + AT_rich Low_complexity Low_complexity 1 32 0 223 290 61 46 chr2 229794903 229795034 -20892820 - MIR SINE MIR -36 226 94 214 238 143 16 chr2 229795813 229795876 -20891978 - MIR SINE MIR -55 153 83 276 321 0 0 chr2 229795876 229795957 -20891897 - L2 LINE L2 -6 3266 3186 308 325 112 5 chr2 229796816 229797013 -20890841 + MIR SINE MIR 35 252 -10 1885 182 7 0 chr2 229797371 229797673 -20890181 + AluSx SINE Alu 1 304 -8 281 165 21 21 chr2 229798119 229798193 -20889661 + GA-rich Low_complexity Low_complexity 5 81 -20 2049 121 0 37 chr2 229798193 229798491 -20889363 + AluSx SINE Alu 1 287 -25 281 165 21 21 chr2 229798491 229798513 -20889341 + GA-rich Low_complexity Low_complexity 80 101 0 303 146 0 0 chr2 229799081 229799136 -20888718 + (TGGA)n Simple_repeat Simple_repeat 3 57 0 221 345 46 91 chr2 229799948 229800145 -20887709 - MIR3 SINE MIR -12 196 9 211 267 175 33 chr2 229800389 229800509 -20887345 - MIR SINE MIR -62 200 64 225 246 0 31 chr2 229802045 229802110 -20885744 - MER69 DNA AcHobo -1 2525 2463 341 258 41 0 chr2 229802114 229802247 -20885607 - MER69 DNA AcHobo -1079 147 1 207 0 0 0 chr2 229803597 229803620 -20884234 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6178 29 0 7 chr2 229803620 229804357 -20883497 - L1PA4 LINE L1 -11 6144 5413 974 209 128 7 chr2 229804517 229804790 -20883064 + MER58B DNA MER1_type 28 333 -8 536 230 120 18 chr2 229804798 229804991 -20882863 - MIR SINE MIR -1 261 44 1609 157 31 53 chr2 229806142 229806461 -20881393 - AluJo SINE Alu 0 312 1 241 286 10 41 chr2 229806494 229806592 -20881262 - L2 LINE L2 0 3272 3178 21 0 0 0 chr2 229806651 229806672 -20881182 + AT_rich Low_complexity Low_complexity 1 21 0 2180 132 0 0 chr2 229807283 229807587 -20880267 - AluSx SINE Alu -7 305 2 341 266 14 56 chr2 229807895 229808038 -20879816 + MER5A DNA MER1_type 28 164 -25 1709 87 111 66 chr2 229808285 229808573 -20879281 - AluY SINE Alu -10 301 1 186 277 0 0 chr2 229809656 229809703 -20878151 + L2 LINE L2 3223 3269 -3 377 281 31 0 chr2 229810745 229810841 -20877013 + MIR SINE MIR 110 208 -54 248 261 25 93 chr2 229812312 229812394 -20875460 + MIR SINE MIR 50 123 -85 1397 171 52 28 chr2 229812394 229812680 -20875174 - AluJo SINE Alu -19 293 1 248 261 25 93 chr2 229812680 229812728 -20875126 + MIR SINE MIR 123 173 -35 2160 123 17 0 chr2 229812878 229813180 -20874674 - AluSx SINE Alu 0 312 6 207 100 0 0 chr2 229813900 229813930 -20873924 + (A)n Simple_repeat Simple_repeat 1 30 0 1238 229 19 38 chr2 229814253 229814619 -20873235 - L1ME2 LINE L1 -115 6049 5691 3042 212 41 33 chr2 229814904 229816380 -20871474 + L1ME1 LINE L1 4613 6102 -64 2421 177 20 0 chr2 229816399 229816857 -20870997 + L1MB5 LINE L1 5697 6163 -11 455 355 83 52 chr2 229817142 229817505 -20870349 + L2 LINE L2 2887 3260 -12 1973 69 54 0 chr2 229817687 229817948 -20869906 + AluY SINE Alu 18 292 -19 399 41 0 0 chr2 229817948 229817997 -20869857 + (GGAA)n Simple_repeat Simple_repeat 1 49 0 672 174 14 7 chr2 229818302 229818440 -20869414 - MER69 DNA AcHobo -8 2518 2380 274 269 30 0 chr2 229818665 229818732 -20869122 - MIR SINE MIR -62 200 132 266 298 157 33 chr2 229818833 229818954 -20868900 + MIR SINE MIR 6 141 -121 21 71 0 0 chr2 229819870 229819912 -20867942 + AT_rich Low_complexity Low_complexity 1 42 0 205 259 86 43 chr2 229823377 229823493 -20864361 - MIR SINE MIR -83 179 59 223 239 0 0 chr2 229823738 229823784 -20864070 + (ATGGTG)n Simple_repeat Simple_repeat 5 50 0 31 0 0 0 chr2 229826626 229826657 -20861197 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 229827380 229827403 -20860451 + AT_rich Low_complexity Low_complexity 1 23 0 212 333 0 20 chr2 229828858 229828957 -20858897 - MIR3 SINE MIR -12 196 100 397 110 41 14 chr2 229829388 229829461 -20858393 - MER69 DNA AcHobo 0 2526 2452 1373 127 4 42 chr2 229829852 229829952 -20857902 - MER30 DNA MER1_type 0 230 128 2392 77 0 0 chr2 229829952 229830249 -20857605 + AluSc SINE Alu 1 297 -12 1373 127 4 42 chr2 229830249 229830384 -20857470 - MER30 DNA MER1_type -102 128 4 2205 102 0 10 chr2 229831258 229831552 -20856302 - AluSx SINE Alu -21 291 1 267 31 0 0 chr2 229831598 229831630 -20856224 + (TG)n Simple_repeat Simple_repeat 1 32 0 2124 138 0 0 chr2 229832227 229832525 -20855329 + AluSq SINE Alu 1 298 -15 220 176 0 0 chr2 229832525 229832559 -20855295 + polypurine Low_complexity Low_complexity 1 34 0 576 183 11 43 chr2 229832561 229832747 -20855107 + GA-rich Low_complexity Low_complexity 1 180 0 290 250 211 26 chr2 229835436 229835592 -20852262 + L1MC4a LINE L1 5725 5909 -1899 360 43 0 0 chr2 229836895 229836941 -20850913 + (TG)n Simple_repeat Simple_repeat 2 47 0 233 329 109 7 chr2 229837059 229837196 -20850658 - MIR SINE MIR -7 255 105 2293 109 0 0 chr2 229838242 229838535 -20849319 - AluSx SINE Alu -18 294 2 180 0 0 0 chr2 229838851 229838871 -20848983 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 209 83 28 0 chr2 229843066 229843102 -20844752 + (GGA)n Simple_repeat Simple_repeat 1 37 0 468 0 0 0 chr2 229844268 229844320 -20843534 + (TG)n Simple_repeat Simple_repeat 2 53 0 204 179 0 0 chr2 229847084 229847123 -20840731 + T-rich Low_complexity Low_complexity 1 39 0 459 0 0 0 chr2 229851584 229851616 -20836238 + (TG)n Simple_repeat Simple_repeat 1 83 0 459 0 0 0 chr2 229851616 229851667 -20836187 + (TG)n Simple_repeat Simple_repeat 2 52 0 262 246 16 0 chr2 229855276 229855337 -20832517 + GA-rich Low_complexity Low_complexity 1 62 0 243 224 47 0 chr2 229855616 229855701 -20832153 + (TG)n Simple_repeat Simple_repeat 1 89 0 239 143 41 0 chr2 229856631 229856680 -20831174 + GA-rich Low_complexity Low_complexity 2 52 0 212 147 0 0 chr2 229857281 229857315 -20830539 + (TTC)n Simple_repeat Simple_repeat 3 36 0 318 87 0 0 chr2 229857818 229857864 -20829990 + (CA)n Simple_repeat Simple_repeat 1 46 0 371 268 98 9 chr2 229859944 229860056 -20827798 - L2 LINE L2 -1 3271 3150 318 260 39 29 chr2 229861218 229861322 -20826532 - L1M4 LINE L1 -2960 3186 3082 182 36 0 36 chr2 229861322 229861350 -20826504 + (TC)n Simple_repeat Simple_repeat 1 27 0 439 230 110 10 chr2 229861371 229861471 -20826383 - FLAM_C SINE Alu -27 116 7 494 305 112 0 chr2 229862754 229862941 -20824913 - MIR SINE MIR -11 251 44 180 0 0 0 chr2 229863214 229863234 -20824620 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 1909 113 0 7 chr2 229863234 229863516 -20824338 - AluJo SINE Alu -32 280 1 372 43 0 0 chr2 229864847 229864893 -20822961 + (TG)n Simple_repeat Simple_repeat 2 47 0 225 0 0 0 chr2 229864894 229864919 -20822935 + (GA)n Simple_repeat Simple_repeat 2 26 0 545 224 16 71 chr2 229865091 229865274 -20822580 + MER5B DNA MER1_type 2 174 -4 484 329 66 24 chr2 229866958 229867247 -20820607 - L2 LINE L2 -8 3305 3005 334 247 0 82 chr2 229867311 229867408 -20820446 - MIR SINE MIR -77 185 97 22 80 0 0 chr2 229869833 229869883 -20817971 + AT_rich Low_complexity Low_complexity 1 50 0 204 192 13 39 chr2 229870868 229870946 -20816908 + (CCG)n Simple_repeat Simple_repeat 3 78 0 948 147 32 0 chr2 229873988 229874144 -20813710 - MER20 DNA MER1_type -2 217 57 563 140 170 10 chr2 229874718 229874818 -20813036 + Tigger4(Zombi) DNA MER2_type 2 117 -2614 23 0 0 0 chr2 229874819 229874842 -20813012 + AT_rich Low_complexity Low_complexity 1 23 0 1953 120 19 3 chr2 229874855 229875163 -20812691 + AluSq SINE Alu 1 313 0 336 218 10 99 chr2 229875163 229875264 -20812590 - L1MC4 LINE L1 -1337 6705 6614 210 71 0 0 chr2 229875272 229875300 -20812554 + (TA)n Simple_repeat Simple_repeat 1 28 0 1170 88 88 0 chr2 229875316 229875487 -20812367 + Tigger4(Zombi) DNA MER2_type 2546 2731 0 572 339 21 8 chr2 229875709 229875903 -20811951 + MIR SINE MIR 20 210 -52 187 286 18 0 chr2 229875994 229876050 -20811804 - MIR SINE MIR -141 121 65 771 171 0 20 chr2 229876416 229876562 -20811292 + L1MC3 LINE L1 7489 7631 -154 1307 172 111 0 chr2 229876860 229877139 -20810715 + AluJo SINE Alu 1 310 -2 659 192 6 0 chr2 229877147 229877314 -20810540 + GA-rich Low_complexity Low_complexity 3 170 0 1465 189 3 29 chr2 229877320 229877626 -20810228 + AluJo SINE Alu 9 306 -6 2584 135 36 17 chr2 229879078 229879493 -20808361 + Tigger2a DNA MER2_type 11 433 -1 1761 173 0 0 chr2 229879563 229879847 -20808007 + AluSx SINE Alu 10 293 -19 4161 220 19 43 chr2 229879917 229879932 -20807922 - L1MB2 LINE L1 -3 6168 6154 288 0 0 0 chr2 229879932 229879964 -20807890 + (TG)n Simple_repeat Simple_repeat 1 32 0 4161 220 19 43 chr2 229879964 229880147 -20807707 - L1MB2 LINE L1 -17 6154 5968 236 65 0 0 chr2 229880147 229880178 -20807676 - MADE1 DNA Mariner -14 66 36 4161 220 19 43 chr2 229880178 229881333 -20806521 - L1MB2 LINE L1 -203 5968 4828 2194 114 0 0 chr2 229881333 229881640 -20806214 - AluSx SINE Alu -5 307 1 4161 220 19 43 chr2 229881640 229881881 -20805973 - L1MB2 LINE L1 -1343 4828 4583 227 203 156 62 chr2 229882305 229882433 -20805421 - MER103 DNA DNA -10 156 17 413 180 45 18 chr2 229882837 229882948 -20804906 - MER69 DNA AcHobo -276 2250 2137 2007 198 86 24 chr2 229883233 229883831 -20804023 - MER69 DNA AcHobo 0 2526 1890 1011 285 196 3 chr2 229883833 229884205 -20803649 - MER69 DNA AcHobo -2082 444 1 16196 181 27 6 chr2 229884370 229884469 -20803385 + L1M2 LINE L1 1 96 -6752 744 22 0 0 chr2 229884469 229884559 -20803295 + (GA)n Simple_repeat Simple_repeat 1 90 0 16196 181 27 6 chr2 229884559 229887354 -20800500 + L1M2 LINE L1 96 2958 -3890 1026 138 0 12 chr2 229887715 229887882 -20799972 + FRAM SINE Alu 1 164 -12 302 227 76 3 chr2 229887972 229888066 -20799788 - MIR SINE MIR -33 175 75 197 197 16 0 chr2 229890714 229890775 -20797079 + (TA)n Simple_repeat Simple_repeat 1 62 0 544 159 28 0 chr2 229890971 229891078 -20796776 - MER65A LTR ERV1 0 445 336 438 148 119 30 chr2 229891043 229891144 -20796710 + MER65A LTR ERV1 336 445 0 * 2833 113 11 13 chr2 229891165 229891624 -20796230 + L1MA3 LINE L1 5848 6305 0 198 174 0 0 chr2 229891846 229891892 -20795962 + (TTCA)n Simple_repeat Simple_repeat 4 49 0 2144 75 19 34 chr2 229892828 229893150 -20794704 - L1PA13 LINE L1 -2 6161 5845 2406 106 0 59 chr2 229893895 229894071 -20793783 + Tigger2a DNA MER2_type 1 143 -2565 2569 101 20 6 chr2 229894071 229894428 -20793426 - THE1B LTR MaLR -2 362 1 2406 106 0 59 chr2 229894428 229894639 -20793215 + Tigger2a DNA MER2_type 143 365 -69 340 288 34 90 chr2 229895171 229895404 -20792450 - L1ME4a LINE L1 -98 6023 5804 2228 101 0 0 chr2 229895406 229895693 -20792161 + AluSq SINE Alu 1 287 -26 207 0 0 0 chr2 229895700 229895723 -20792131 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 450 310 95 55 chr2 229895723 229896184 -20791670 - L1ME4a LINE L1 -307 5814 5339 28 0 0 0 chr2 229896563 229896591 -20791263 + AT_rich Low_complexity Low_complexity 1 28 0 1719 173 7 10 chr2 229896592 229896893 -20790961 + AluJb SINE Alu 1 300 -12 396 295 99 80 chr2 229897284 229897657 -20790197 - L1ME4a LINE L1 -1680 4466 4074 2091 137 0 0 chr2 229897657 229897957 -20789897 - AluSx SINE Alu -12 300 1 396 295 99 80 chr2 229897957 229898208 -20789646 - L1ME4a LINE L1 -2072 4074 3829 877 180 6 45 chr2 229898638 229898816 -20789038 - FAM SINE Alu -4 171 1 21 0 0 0 chr2 229899832 229899853 -20788001 + AT_rich Low_complexity Low_complexity 1 21 0 2203 127 13 0 chr2 229900813 229901121 -20786733 + AluSx SINE Alu 1 312 0 230 37 37 56 chr2 229901282 229901336 -20786518 + (TTTTTG)n Simple_repeat Simple_repeat 3 55 0 494 302 67 25 chr2 229902011 229902296 -20785558 - L1MC4 LINE L1 -472 7570 7274 491 261 24 24 chr2 229902348 229902365 -20785489 - L1MA10 LINE L1 0 6334 6318 1407 232 38 20 chr2 229902365 229902762 -20785092 - L1ME2 LINE L1 -9 6224 5821 * 3152 225 90 20 chr2 229902756 229904018 -20783836 - L1ME2 LINE L1 -1237 4978 3541 1713 257 35 13 chr2 229904007 229904463 -20783391 - L1ME2 LINE L1 -5896 500 35 * 23 0 0 0 chr2 229904540 229904563 -20783291 + AT_rich Low_complexity Low_complexity 1 23 0 750 262 47 11 chr2 229904758 229905059 -20782795 - L1MC4 LINE L1 -974 7068 6669 21 57 0 0 chr2 229905206 229905241 -20782613 + AT_rich Low_complexity Low_complexity 1 35 0 394 249 65 108 chr2 229905322 229905507 -20782347 + MER5B DNA MER1_type 1 177 -1 2000 158 30 19 chr2 229906212 229906573 -20781281 - MLT1A1 LTR MaLR 0 365 1 565 281 83 63 chr2 229906582 229906688 -20781166 - L1MC4 LINE L1 0 8042 7940 2354 127 21 10 chr2 229906688 229907074 -20780780 - MLT1B LTR MaLR 0 390 1 565 281 83 63 chr2 229907074 229907507 -20780347 - L1MC4 LINE L1 -102 7940 7492 347 200 33 22 chr2 229907590 229907680 -20780174 + MLT1H LTR MaLR 84 174 -375 299 309 11 0 chr2 229907864 229907958 -20779896 + MLT1H LTR MaLR 455 549 0 239 206 111 0 chr2 229907980 229908043 -20779811 - L1MC4 LINE L1 -569 7473 7404 260 246 102 60 chr2 229909403 229909570 -20778284 - L1MC5 LINE L1 -54 7907 7734 970 213 109 85 chr2 229909580 229909924 -20777930 + MSTD LTR MaLR 1 396 0 315 259 42 72 chr2 229909925 229910257 -20777597 - L1MC5 LINE L1 -241 7720 7399 1003 157 5 16 chr2 229910687 229910878 -20776976 - MER53 DNA DNA 0 189 1 795 232 207 61 chr2 229912007 229912485 -20775369 + MLT1H LTR MaLR 2 549 0 28 0 0 0 chr2 229914661 229914689 -20773165 + AT_rich Low_complexity Low_complexity 1 28 0 2458 130 14 0 chr2 229914872 229915242 -20772612 + THE1C LTR MaLR 1 375 0 26 50 0 0 chr2 229915727 229915767 -20772087 + AT_rich Low_complexity Low_complexity 1 40 0 2116 104 24 0 chr2 229915781 229916069 -20771785 + AluSq SINE Alu 5 299 -14 811 274 5 5 chr2 229916513 229916725 -20771129 - MLT1-int LTR MaLR -484 887 676 292 336 67 0 chr2 229916868 229916987 -20770867 + L2 LINE L2 2859 2985 -328 290 299 13 0 chr2 229916989 229917066 -20770788 + MER81 DNA DNA 30 107 -7 432 291 43 0 chr2 229917074 229917191 -20770663 + L2 LINE L2 3192 3313 0 29 0 0 0 chr2 229917451 229917480 -20770374 + AT_rich Low_complexity Low_complexity 1 29 0 335 314 27 11 chr2 229917745 229917933 -20769921 + L1MCc LINE L1 7 197 -6226 1988 73 0 18 chr2 229917958 229918232 -20769622 - L1PA6 LINE L1 0 6154 5886 16059 126 12 22 chr2 229918232 229920849 -20767005 - L1P LINE L1 -3553 2593 3 324 274 27 96 chr2 229920866 229921085 -20766769 + L1MCc LINE L1 255 458 -5965 2738 126 21 9 chr2 229921291 229921713 -20766141 - MSTA LTR MaLR 0 428 2 216 0 0 0 chr2 229921818 229921842 -20766012 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1201 278 85 30 chr2 229922006 229922927 -20764927 + L1MCc LINE L1 1129 2306 -4816 248 326 42 62 chr2 229923144 229923337 -20764517 - MER20 DNA MER1_type 0 219 31 1072 191 16 0 chr2 229923359 229923553 -20764301 - MER20 DNA MER1_type -1 218 22 14708 162 32 29 chr2 229923588 229926321 -20761533 + L1MA3 LINE L1 13 2735 -4830 7007 58 16 3 chr2 229926321 229927424 -20760430 - L1PA7 LINE L1 -7 6147 5036 14708 162 32 29 chr2 229927424 229928802 -20759052 + L1MA3 LINE L1 2735 4107 -3458 2209 64 40 34 chr2 229928802 229929098 -20758756 - AluY SINE Alu -13 298 1 14708 162 32 29 chr2 229929098 229931027 -20756827 + L1MA3 LINE L1 4107 6428 -1137 3594 115 53 2 chr2 229931031 229931735 -20756119 + L1MA3 LINE L1 6515 7251 -473 1490 42 73 0 chr2 229931732 229931923 -20755931 + L1P3 LINE L1 5404 5608 -546 * 2669 99 21 59 chr2 229931924 229932399 -20755455 + L1MA3 LINE L1 7267 7723 -1 260 328 0 21 chr2 229932688 229932823 -20755031 + GA-rich Low_complexity Low_complexity 1 132 0 470 297 93 62 chr2 229932950 229933368 -20754486 + L1ME LINE L1 4950 5380 -766 550 291 73 30 chr2 229933374 229933704 -20754150 + L1ME LINE L1 5406 5749 -372 26 0 0 0 chr2 229933879 229933905 -20753949 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 229934454 229934475 -20753379 + AT_rich Low_complexity Low_complexity 1 21 0 419 324 102 25 chr2 229935049 229935293 -20752561 + MLT1L LTR MaLR 3 265 -350 319 179 119 0 chr2 229935433 229935500 -20752354 - AluJo SINE Alu -133 169 95 1350 219 68 38 chr2 229935500 229935866 -20751988 - MLT1E3 LTR MaLR -247 377 1 184 270 27 0 chr2 229936069 229936106 -20751748 - MER5A DNA MER1_type -86 103 66 2170 59 0 0 chr2 229936106 229936362 -20751492 - AluY SINE Alu -19 292 37 220 175 0 0 chr2 229936547 229936587 -20751267 + L2 LINE L2 3267 3306 -7 2220 121 0 3 chr2 229936695 229937000 -20750854 + AluSx SINE Alu 2 305 -7 1890 207 9 12 chr2 229937138 229937563 -20750291 - L1MB7 LINE L1 0 6184 5761 328 206 42 19 chr2 229937655 229937767 -20750087 - MLT1J LTR MaLR -328 287 110 1649 199 3 3 chr2 229938044 229938355 -20749499 - AluJo SINE Alu -1 311 1 745 239 5 10 chr2 229938359 229938556 -20749298 + L1MC5 LINE L1 7704 7899 -62 536 271 40 70 chr2 229939079 229939244 -20748610 - MLT1J LTR MaLR -6 505 350 1945 168 8 35 chr2 229939244 229939618 -20748236 - MLT1A1 LTR MaLR -1 364 1 536 271 40 70 chr2 229939618 229939725 -20748129 - MLT1J LTR MaLR -161 350 241 271 277 58 32 chr2 229939733 229939888 -20747966 - MLT1J LTR MaLR -340 171 13 2378 134 35 0 chr2 229940116 229940489 -20747365 + Tigger2 DNA MER2_type 2333 2718 0 584 90 0 11 chr2 229940667 229940756 -20747098 + (TTCC)n Simple_repeat Simple_repeat 2 89 0 1886 186 165 0 chr2 229940828 229941258 -20746596 + MLT1D LTR MaLR 5 505 0 354 173 42 42 chr2 229941533 229941701 -20746153 + (TTATA)n Simple_repeat Simple_repeat 4 171 0 232 221 23 12 chr2 229941708 229941794 -20746060 + L1MC4 LINE L1 6615 6701 -1341 527 127 0 34 chr2 229941795 229941913 -20745941 + (TA)n Simple_repeat Simple_repeat 1 114 0 33 25 0 0 chr2 229941965 229942005 -20745849 + AT_rich Low_complexity Low_complexity 1 40 0 432 101 43 43 chr2 229942105 229942174 -20745680 - FLAM_A SINE Alu -18 124 56 427 328 20 15 chr2 229942174 229942375 -20745479 - L1ME3A LINE L1 -305 5865 5664 1059 278 87 7 chr2 229942378 229943182 -20744672 - L1ME3A LINE L1 -558 5604 4733 417 353 72 17 chr2 229943187 229943487 -20744367 + L1MEc LINE L1 102 540 -5665 3781 150 45 120 chr2 229943722 229944636 -20743218 + Tigger4(Zombi) DNA MER2_type 1 845 -1886 22 70 0 0 chr2 229944684 229944727 -20743127 + AT_rich Low_complexity Low_complexity 1 43 0 307 71 18 18 chr2 229944758 229944814 -20743040 + (TTTTA)n Simple_repeat Simple_repeat 1 56 0 1694 163 4 7 chr2 229944819 229945095 -20742759 - AluJb SINE Alu -37 275 1 2378 77 115 0 chr2 229945204 229945542 -20742312 + MER51B LTR ERV1 1 377 0 2421 104 42 0 chr2 229945920 229946306 -20741548 + Tigger4(Zombi) DNA MER2_type 824 1225 -1506 * 5913 138 13 21 chr2 229946299 229947344 -20740510 + Tigger4(Zombi) DNA MER2_type 1695 2731 0 976 152 46 0 chr2 229947367 229947518 -20740336 + FRAM SINE Alu 1 158 -8 337 224 9 58 chr2 229947533 229947728 -20740126 + L1MEc LINE L1 635 940 -5265 473 284 114 61 chr2 229947983 229948399 -20739455 + L1MEc LINE L1 1012 1573 -4642 2064 119 11 3 chr2 229948399 229948685 -20739169 - AluSc SINE Alu -20 289 2 473 284 114 61 chr2 229948685 229948915 -20738939 + L1MEc LINE L1 1573 1789 -4426 698 328 94 0 chr2 229949046 229949391 -20738463 + LTR16A LTR ERVL 1 391 -59 2554 102 80 12 chr2 229949391 229949792 -20738062 + MSTA LTR MaLR 1 428 0 698 328 94 0 chr2 229949792 229949852 -20738002 + LTR16A LTR ERVL 391 444 -6 374 291 50 25 chr2 229949863 229950067 -20737787 - L1 LINE L1 -1525 4621 4411 271 295 32 21 chr2 229950261 229950356 -20737498 - MLT1K LTR MaLR -341 247 152 323 226 30 55 chr2 229950862 229950985 -20736869 - MIR SINE MIR -63 145 31 691 164 25 8 chr2 229951764 229951886 -20735968 + FLAM_A SINE Alu 1 124 -9 25 0 0 0 chr2 229952119 229952144 -20735710 + AT_rich Low_complexity Low_complexity 1 25 0 2028 104 3 67 chr2 229952145 229952461 -20735393 - AluY SINE Alu -15 296 1 534 247 31 43 chr2 229952505 229952667 -20735187 - MIR SINE MIR -8 254 95 195 367 58 58 chr2 229953173 229953519 -20734335 - L2 LINE L2 -21 3251 2906 291 178 0 0 chr2 229953724 229953769 -20734085 - MIR3 SINE MIR -21 187 143 2305 147 30 35 chr2 229953790 229954225 -20733629 + Tigger2a DNA MER2_type 1 433 -1 2040 133 60 28 chr2 229954714 229955067 -20732787 - THE1B LTR MaLR 0 364 1 1535 200 35 136 chr2 229955479 229955553 -20732301 + MLT2B1 LTR ERVL 1 81 -439 840 186 0 58 chr2 229955553 229955725 -20732129 + FAM SINE Alu 1 162 -13 1535 200 35 136 chr2 229955725 229955773 -20732081 + MLT2B1 LTR ERVL 81 132 -388 279 0 0 0 chr2 229955773 229955804 -20732050 + (TG)n Simple_repeat Simple_repeat 2 32 0 1535 200 35 136 chr2 229955804 229956259 -20731595 + MLT2B1 LTR ERVL 132 520 0 311 64 0 0 chr2 229956699 229956746 -20731108 + HY1 scRNA scRNA 65 111 -1 706 131 0 0 chr2 229956765 229956872 -20730982 + HY1 scRNA scRNA 5 111 -1 35 24 0 0 chr2 229956872 229956914 -20730940 + AT_rich Low_complexity Low_complexity 1 42 0 256 125 0 0 chr2 229957124 229957164 -20730690 + MLT2B2 LTR ERVL 311 350 -165 223 283 148 31 chr2 229957920 229958088 -20729766 - MIR SINE MIR -62 146 4 2083 123 50 34 chr2 229958510 229958868 -20728986 + THE1B LTR MaLR 1 364 0 372 269 32 84 chr2 229958916 229959165 -20728689 - Charlie8 DNA MER1_type -1001 1416 94 779 171 44 0 chr2 229959180 229959338 -20728516 - L1MA8 LINE L1 -2 6289 6125 828 61 0 0 chr2 229959338 229959436 -20728418 - AluSg/x SINE Alu -17 292 195 2934 126 38 22 chr2 229959452 229960000 -20727854 - L1MA8 LINE L1 -195 6096 5540 244 227 45 15 chr2 229960000 229960066 -20727788 - Charlie8 DNA MER1_type -2303 114 47 27 62 0 0 chr2 229961270 229961318 -20726536 + AT_rich Low_complexity Low_complexity 1 48 0 1180 157 47 21 chr2 229961449 229961684 -20726170 - L1PA15 LINE L1 0 6165 5925 682 169 39 15 chr2 229961691 229961821 -20726033 - FLAM_A SINE Alu 0 133 1 337 176 71 0 chr2 229961825 229961910 -20725944 - L1MA8 LINE L1 -944 5202 5112 300 286 75 27 chr2 229963075 229963222 -20724632 + MIR SINE MIR 32 185 -77 181 213 0 64 chr2 229963287 229963334 -20724520 + L2 LINE L2 3004 3047 -266 271 308 51 18 chr2 229963798 229963920 -20723934 + MIR SINE MIR 74 198 -54 538 261 28 57 chr2 229964068 229964244 -20723610 + MIR SINE MIR 3 176 -32 5002 41 0 0 chr2 229964244 229965045 -20722809 - L1PA5 LINE L1 -270 5884 5084 1100 199 11 23 chr2 229965045 229965311 -20722543 + MER83B-int LTR ERV1 4059 4321 -559 3729 103 72 19 chr2 229965315 229965992 -20721862 + MER83B-int LTR ERV1 3881 4593 -2005 442 318 61 36 chr2 230016778 230017052 -20670802 - LTR33A LTR ERVL -239 284 32 2343 104 0 0 chr2 230017402 230017700 -20670154 - AluSx SINE Alu -14 298 1 412 235 0 24 chr2 230018466 230018636 -20669218 + (TATG)n Simple_repeat Simple_repeat 4 169 0 312 91 0 0 chr2 230019199 230019243 -20668611 + (GGGA)n Simple_repeat Simple_repeat 3 46 0 291 203 0 0 chr2 230019248 230019322 -20668532 + (TG)n Simple_repeat Simple_repeat 2 75 0 570 248 166 0 chr2 230020287 230020432 -20667422 + MER5A DNA MER1_type 21 189 0 1788 163 108 0 chr2 230021700 230022025 -20665829 - MER46B DNA MER2_type -1 235 1 239 310 62 103 chr2 230022077 230022222 -20665632 + L2 LINE L2 3117 3255 -17 2305 90 7 3 chr2 230022422 230022721 -20665133 - AluSg SINE Alu -10 300 1 2006 111 44 0 chr2 230023199 230023504 -20664350 - AluSx SINE Alu 0 319 3 2564 276 57 20 chr2 230023525 230024381 -20663473 - L1ME3A LINE L1 0 6170 5283 939 192 123 5 chr2 230024408 230024611 -20663243 - AluJo SINE Alu -1 311 85 546 260 78 15 chr2 230024614 230024919 -20662935 - L1ME3A LINE L1 -924 5222 4883 2099 156 6 0 chr2 230024964 230025285 -20662569 - MER44D DNA MER2_type 0 609 17 1176 232 101 5 chr2 230025295 230025670 -20662184 - L1ME3A LINE L1 -1331 4815 4405 770 254 68 32 chr2 230025671 230025891 -20661963 - MIR SINE MIR -34 228 1 284 274 139 45 chr2 230025897 230026010 -20661844 + L1ME4a LINE L1 5692 5793 -328 2066 178 15 0 chr2 230026010 230026347 -20661507 + MER2 DNA MER2_type 2 343 -1 284 274 139 45 chr2 230026347 230026456 -20661398 + L1ME4a LINE L1 5793 5935 -186 267 173 0 0 chr2 230026696 230026748 -20661106 + (TG)n Simple_repeat Simple_repeat 2 53 0 821 192 40 0 chr2 230028028 230028179 -20659675 - AluJo SINE Alu -36 276 120 193 323 143 12 chr2 230028267 230028428 -20659426 - MIR SINE MIR -1 261 80 3223 102 129 19 chr2 230028478 230028949 -20658905 - MER1A DNA MER1_type 0 527 5 615 203 188 0 chr2 230030457 230030585 -20657269 + AluJo SINE Alu 2 153 -159 266 182 91 65 chr2 230030586 230030663 -20657191 + FLAM SINE Alu 55 133 0 1762 185 3 3 chr2 230031587 230031890 -20655964 - AluJb SINE Alu -9 303 1 201 267 191 62 chr2 230032877 230033102 -20654752 + L2 LINE L2 2888 3141 -172 788 180 0 8 chr2 230033119 230033247 -20654607 + FLAM_C SINE Alu 1 127 -16 2462 82 0 0 chr2 230033362 230033666 -20654188 - AluY SINE Alu -7 304 1 296 221 228 54 chr2 230034241 230034390 -20653464 + MER5A DNA MER1_type 9 183 -6 416 355 16 11 chr2 230034514 230034697 -20653157 - MIR SINE MIR -70 192 9 306 0 0 0 chr2 230035059 230035093 -20652761 + (A)n Simple_repeat Simple_repeat 1 34 0 725 160 133 140 chr2 230035414 230035821 -20652033 - LTR37B LTR ERV1 -64 404 1 2225 107 10 10 chr2 230037396 230037705 -20650149 - AluSg SINE Alu -1 309 1 449 264 139 10 chr2 230037887 230038095 -20649759 - L1ME4a LINE L1 -4 6117 5883 337 224 0 0 chr2 230038431 230038498 -20649356 - L1ME4a LINE L1 -450 5671 5605 4017 86 4 0 chr2 230039430 230039968 -20647886 - L1PB1 LINE L1 -186 5965 5426 1240 123 5 41 chr2 230039968 230040107 -20647747 + L1PB1 LINE L1 5961 6095 -56 2324 100 3 0 chr2 230040107 230040407 -20647447 + AluSp SINE Alu 1 301 -12 1240 123 5 41 chr2 230040407 230040460 -20647394 + L1PB1 LINE L1 6095 6148 -3 186 329 123 34 chr2 230040513 230040659 -20647195 - L2 LINE L2 -23 3249 3091 264 400 19 6 chr2 230040837 230040997 -20646857 - L2 LINE L2 -366 2948 2787 341 279 115 0 chr2 230041042 230041146 -20646708 + MER5A DNA MER1_type 69 184 -5 1293 279 100 7 chr2 230041779 230042199 -20645655 - L1MC4a LINE L1 -1888 5920 5462 25 31 0 0 chr2 230042371 230042403 -20645451 + AT_rich Low_complexity Low_complexity 1 32 0 1839 202 93 13 chr2 230042431 230042882 -20644972 - L1MD2 LINE L1 -227 6132 5646 289 199 59 66 chr2 230042858 230042994 -20644860 - L1MC4a LINE L1 -2378 5430 5296 * 375 326 42 7 chr2 230043382 230043526 -20644328 - MLT1K LTR MaLR -290 298 150 374 263 11 23 chr2 230043958 230044133 -20643721 + CT-rich Low_complexity Low_complexity 1 173 0 735 164 0 0 chr2 230044213 230044384 -20643470 + G-rich Low_complexity Low_complexity 1 171 0 374 272 40 24 chr2 230044685 230044810 -20643044 + MIR SINE MIR 15 141 -121 749 223 35 10 chr2 230045173 230045375 -20642479 + L3b LINE CR1 1246 1452 -131 475 252 156 66 chr2 230045644 230045760 -20642094 - MER102b DNA MER1_type -1099 329 225 1688 91 0 0 chr2 230045760 230045970 -20641884 - AluY SINE Alu -13 298 89 475 252 156 66 chr2 230045970 230046155 -20641699 - MER102b DNA MER1_type -1203 225 1 378 197 0 0 chr2 230046288 230046364 -20641490 - MER116 DNA Mariner -4 76 1 346 291 39 0 chr2 230048158 230048261 -20639593 - MIR SINE MIR 0 262 156 333 180 16 0 chr2 230048261 230048322 -20639532 + Tigger2 DNA MER2_type 1 62 -2656 2514 128 27 3 chr2 230049786 230050162 -20637692 + Tigger2 DNA MER2_type 2334 2718 0 449 223 0 0 chr2 230050171 230050265 -20637589 - MIR SINE MIR -122 140 47 313 267 27 0 chr2 230051053 230051128 -20636726 + MER5B DNA MER1_type 69 145 -33 430 246 120 80 chr2 230051206 230051377 -20636477 - L2 LINE L2 -5 3308 3145 764 141 0 92 chr2 230051377 230051519 -20636335 + FLAM_A SINE Alu 1 129 -4 430 246 120 80 chr2 230051519 230051946 -20635908 - L2 LINE L2 -168 3145 2677 1295 164 31 88 chr2 230052179 230052496 -20635358 + AluJo SINE Alu 1 299 -13 466 132 0 0 chr2 230052496 230052564 -20635290 - L1MB7 LINE L1 -62 6122 6055 772 173 155 6 chr2 230052704 230052872 -20634982 + MER3 DNA MER1_type 17 209 0 22 0 0 0 chr2 230053539 230053561 -20634293 + AT_rich Low_complexity Low_complexity 1 22 0 573 292 41 1 chr2 230053857 230054087 -20633767 - MER115 DNA AcHobo 0 4031 453 438 309 20 13 chr2 230054133 230054282 -20633572 - MER115 DNA AcHobo -360 333 184 1700 182 6 19 chr2 230054442 230054755 -20633099 - AluJb SINE Alu -3 309 1 867 135 105 48 chr2 230055024 230055253 -20632601 - L1MB8 LINE L1 0 6178 5937 192 189 0 0 chr2 230055379 230055416 -20632438 - MER5A DNA MER1_type -1 188 152 2360 83 0 7 chr2 230055983 230056283 -20631571 - AluSg1 SINE Alu -11 298 1 3860 68 13 22 chr2 230056555 230057095 -20630759 + L1PA8 LINE L1 5637 6171 -1 487 128 39 0 chr2 230058977 230059041 -20628813 - MLT1D LTR MaLR 0 626 560 1070 182 52 196 chr2 230059041 230059577 -20628277 - LTR8A LTR ERV1 0 691 174 1810 135 4 0 chr2 230059577 230059844 -20628010 + AluSx SINE Alu 44 311 -1 1070 182 52 196 chr2 230059844 230059997 -20627857 - LTR8A LTR ERV1 -517 174 1 * 1701 192 71 80 chr2 230059997 230060319 -20627535 - MLT1D LTR MaLR -63 442 124 1479 156 64 3 chr2 230060319 230060444 -20627410 + L1MA4 LINE L1 5982 6098 -202 2472 81 3 0 chr2 230060444 230060742 -20627112 + AluSp SINE Alu 1 299 -14 1479 156 64 3 chr2 230060742 230060911 -20626943 + L1MA4 LINE L1 6098 6294 -6 1701 192 71 80 chr2 230060911 230061034 -20626820 - MLT1D LTR MaLR -381 124 1 455 247 10 32 chr2 230061741 230061924 -20625930 - LTR8A LTR ERV1 -439 252 132 236 94 0 0 chr2 230061924 230061956 -20625898 + Alu SINE Alu 44 75 -227 970 120 8 0 chr2 230061957 230062090 -20625764 - AluSg/x SINE Alu -98 214 81 202 279 59 0 chr2 230062658 230062726 -20625128 + MIR SINE MIR 113 184 -78 519 218 11 22 chr2 230063514 230063693 -20624161 + (TATG)n Simple_repeat Simple_repeat 4 180 0 595 214 6 6 chr2 230063743 230063921 -20623933 + (TATG)n Simple_repeat Simple_repeat 1 178 0 578 223 0 22 chr2 230063915 230064099 -20623755 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 * 305 234 0 19 chr2 230064119 230064226 -20623628 + (TATATG)n Simple_repeat Simple_repeat 4 108 0 501 285 0 0 chr2 230064312 230064491 -20623363 + C-rich Low_complexity Low_complexity 1 179 0 359 275 18 30 chr2 230064511 230064678 -20623176 + C-rich Low_complexity Low_complexity 1 165 0 507 275 66 6 chr2 230064874 230064938 -20622916 + MER5B DNA MER1_type 2 61 -117 2352 182 33 19 chr2 230064938 230065040 -20622814 + L1MB3 LINE L1 5679 5778 -405 12573 137 43 53 chr2 230065040 230065382 -20622472 - Tigger1 DNA MER2_type 0 2418 2074 1826 172 10 0 chr2 230065382 230065679 -20622175 - AluJo SINE Alu -8 304 5 12573 137 43 53 chr2 230065679 230066095 -20621759 - Tigger1 DNA MER2_type -344 2074 1655 2244 118 0 7 chr2 230066095 230066401 -20621453 - AluSx SINE Alu -8 304 1 12573 137 43 53 chr2 230066401 230068084 -20619770 - Tigger1 DNA MER2_type -763 1655 1 2352 182 33 19 chr2 230068084 230068460 -20619394 + L1MB3 LINE L1 5778 6164 -19 507 275 66 6 chr2 230068460 230068562 -20619292 + MER5B DNA MER1_type 61 178 0 2475 92 0 3 chr2 230068757 230069071 -20618783 + AluSp SINE Alu 1 313 0 357 316 74 30 chr2 230069565 230069796 -20618058 + MLT1L LTR MaLR 366 606 -9 382 244 56 66 chr2 230070298 230070511 -20617343 - MLT1K LTR MaLR 0 588 378 2367 92 0 3 chr2 230071865 230072159 -20615695 + AluSx SINE Alu 5 297 -15 2137 107 4 0 chr2 230073165 230073483 -20614371 + AluSx SINE Alu 1 319 0 466 274 120 62 chr2 230074170 230074638 -20613216 + L1ME4a LINE L1 5331 5825 -296 1344 237 81 14 chr2 230074652 230075074 -20612780 + L1ME1 LINE L1 5699 6148 -18 189 147 0 0 chr2 230075101 230075135 -20612719 + (GA)n Simple_repeat Simple_repeat 1 34 0 2448 101 67 6 chr2 230075376 230075734 -20612120 - MSTA LTR MaLR -48 380 1 2150 115 27 15 chr2 230075734 230076064 -20611790 - MSTA-int LTR MaLR 0 1651 1318 294 165 52 62 chr2 230076135 230076232 -20611622 - LTR33A LTR ERVL -23 500 405 513 240 62 14 chr2 230076519 230076665 -20611189 - MIR SINE MIR -55 207 55 2580 59 0 3 chr2 230076903 230077209 -20610645 - AluY SINE Alu -6 305 1 979 47 78 0 chr2 230077229 230077358 -20610496 - MER85 DNA T2_type 0 139 1 3193 82 60 26 chr2 230078275 230078772 -20609082 + L1PA11 LINE L1 5661 6174 0 309 257 97 21 chr2 230078773 230078917 -20608937 - L1MC/D LINE L1 -2361 5447 5293 186 43 0 0 chr2 230079899 230079922 -20607932 + (ATTG)n Simple_repeat Simple_repeat 1 23 0 1482 185 71 0 chr2 230079922 230080176 -20607678 - AluJo SINE Alu -30 282 11 390 280 35 35 chr2 230082534 230082677 -20605177 - MIR SINE MIR -118 144 2 225 132 0 0 chr2 230083854 230083892 -20603962 + (TTA)n Simple_repeat Simple_repeat 2 39 0 294 255 121 47 chr2 230084163 230084312 -20603542 - MIR SINE MIR -100 162 3 42 0 0 0 chr2 230084414 230084456 -20603398 + AT_rich Low_complexity Low_complexity 1 42 0 289 300 22 0 chr2 230084902 230084992 -20602862 + MIR3 SINE MIR 107 198 -10 1930 147 22 169 chr2 230085077 230085614 -20602240 - LTR32 LTR ERVL 0 471 14 2028 166 18 18 chr2 230085744 230086081 -20601773 + MER1B DNA MER1_type 1 337 0 204 40 0 0 chr2 230086252 230086277 -20601577 + (TG)n Simple_repeat Simple_repeat 2 26 0 2390 103 3 0 chr2 230087191 230087503 -20600351 + AluSp SINE Alu 1 313 0 1584 183 0 59 chr2 230087928 230088251 -20599603 - AluJo SINE Alu -7 305 2 977 187 0 0 chr2 230088651 230088806 -20599048 - FRAM SINE Alu -11 155 1 1839 163 53 20 chr2 230088835 230089191 -20598663 - THE1C LTR MaLR -7 368 1 9300 125 85 8 chr2 230089191 230090658 -20597196 - THE1C-int LTR MaLR 0 1580 1 1937 166 29 27 chr2 230090658 230091032 -20596822 - THE1C LTR MaLR 0 375 1 602 196 0 0 chr2 230091035 230091142 -20596712 - FLAM_C SINE Alu -35 108 2 2156 164 119 23 chr2 230091313 230091751 -20596103 + LTR54 LTR ERV1 1 480 -30 293 98 0 0 chr2 230091798 230091839 -20596015 + LTR54 LTR ERV1 470 510 0 947 93 0 0 chr2 230092437 230092566 -20595288 + AluSg/x SINE Alu 181 309 -3 1896 163 0 7 chr2 230092639 230092945 -20594909 + AluJo SINE Alu 1 304 -8 1717 208 27 26 chr2 230093057 230093654 -20594200 + MER92B LTR ERV1 7 636 0 2038 123 26 7 chr2 230094752 230095054 -20592800 - AluSx SINE Alu -3 309 2 446 299 151 74 chr2 230095115 230095520 -20592334 - L2 LINE L2 -1 3312 2877 267 239 80 11 chr2 230095532 230095620 -20592234 + L2 LINE L2 1998 2091 -1223 354 324 110 0 chr2 230095641 230095786 -20592068 + MIR3 SINE MIR 43 203 -5 694 139 0 19 chr2 230095801 230095909 -20591945 + U6 snRNA snRNA 2 107 0 243 0 0 0 chr2 230096009 230096036 -20591818 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 207 0 0 0 chr2 230096067 230096090 -20591764 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 313 259 195 28 chr2 230096101 230096352 -20591502 - L2 LINE L2 -12 3301 3009 1127 188 52 26 chr2 230099888 230100117 -20587737 - MER46A DNA MER2_type 0 236 2 21 0 0 0 chr2 230100807 230100828 -20587026 + AT_rich Low_complexity Low_complexity 1 21 0 3964 159 22 37 chr2 230102900 230103164 -20584690 + Tigger2 DNA MER2_type 1 267 -2451 1956 162 0 3 chr2 230103164 230103467 -20584387 + AluJb SINE Alu 1 302 -10 3964 159 22 37 chr2 230103467 230103957 -20583897 + Tigger2 DNA MER2_type 267 744 -1974 1423 179 20 0 chr2 230104014 230104265 -20583589 + Tigger2 DNA MER2_type 2463 2718 0 30 27 0 0 chr2 230104383 230104420 -20583434 + AT_rich Low_complexity Low_complexity 1 37 0 334 262 35 71 chr2 230105858 230105999 -20581855 + MIR3 SINE MIR 32 167 -41 223 276 92 26 chr2 230106042 230106118 -20581736 - MIR3 SINE MIR -45 163 83 980 141 0 0 chr2 230106740 230106882 -20580972 + L1MA4 LINE L1 6157 6298 -2 2265 167 111 30 chr2 230107268 230107772 -20580082 - L1MB7 LINE L1 -19 6165 5621 1871 129 35 3 chr2 230109204 230109490 -20578364 - AluJb SINE Alu -17 295 1 2316 65 11 0 chr2 230109517 230109820 -20578034 - AluY SINE Alu 0 309 4 5793 143 14 8 chr2 230109823 230110754 -20577100 - L1MC1 LINE L1 -8 6325 5389 256 371 0 0 chr2 230110902 230110999 -20576855 + L2 LINE L2 3161 3257 -15 1122 247 47 44 chr2 230111001 230111401 -20576453 + MLT1D LTR MaLR 1 531 -110 641 182 0 0 chr2 230111410 230111520 -20576334 - L1MB7 LINE L1 -209 5975 5866 552 231 166 74 chr2 230111524 230111861 -20575993 - MER20B DNA MER1_type -30 753 386 24 32 0 0 chr2 230111861 230111892 -20575962 + AT_rich Low_complexity Low_complexity 1 31 0 789 131 0 0 chr2 230111892 230111999 -20575855 - FLAM_C SINE Alu -25 118 12 1292 255 3 10 chr2 230112017 230112315 -20575539 - MER20B DNA MER1_type -394 389 94 1441 201 46 147 chr2 230112429 230112524 -20575330 - L1MB8 LINE L1 -28 6150 6047 2120 118 0 30 chr2 230112524 230112828 -20575026 + AluSx SINE Alu 1 295 -17 1441 201 46 147 chr2 230112828 230112845 -20575009 - L1MB8 LINE L1 -131 6047 5735 2014 194 72 61 chr2 230112845 230113521 -20574333 - L1ME1 LINE L1 -67 6099 5468 24 32 0 0 chr2 230113553 230113584 -20574270 + AT_rich Low_complexity Low_complexity 1 31 0 500 262 16 0 chr2 230113604 230113730 -20574124 - MIR SINE MIR -16 246 119 4069 150 143 19 chr2 230113902 230114637 -20573217 + LTR1B LTR ERV1 1 826 0 387 333 145 6 chr2 230115979 230116138 -20571716 - MER5A DNA MER1_type 0 189 9 4794 106 26 15 chr2 230116334 230117114 -20570740 - L1PA16 LINE L1 -11 6155 5333 1939 135 30 3 chr2 230117216 230117513 -20570341 + AluSx SINE Alu 1 305 -7 1756 165 0 20 chr2 230117530 230117827 -20570027 - AluJb SINE Alu -21 291 1 626 274 162 5 chr2 230118064 230118268 -20569586 + MIR SINE MIR 3 238 -24 184 240 120 20 chr2 230118234 230118284 -20569570 + L2 LINE L2 3251 3305 -8 * 405 286 23 23 chr2 230118876 230119009 -20568845 + MER94 DNA DNA 1 133 -1 1506 178 28 28 chr2 230119435 230119750 -20568104 - AluJo SINE Alu 0 315 1 214 155 0 28 chr2 230120450 230120521 -20567333 + (TTTA)n Simple_repeat Simple_repeat 4 72 0 434 277 18 27 chr2 230120717 230120829 -20567025 + MIR SINE MIR 20 130 -78 450 186 124 0 chr2 230120914 230121011 -20566843 + MIR SINE MIR 122 230 -32 530 217 106 19 chr2 230122851 230123012 -20564842 + MER96B DNA MER1_type? 4 178 -239 2959 70 19 5 chr2 230123397 230123768 -20564086 + L1PA8A LINE L1 5754 6129 -2 898 169 18 12 chr2 230123975 230124141 -20563713 + Tigger1 DNA MER2_type 2252 2418 0 535 178 50 0 chr2 230124142 230124243 -20563611 - L1M3 LINE L1 -387 5784 5679 267 226 0 0 chr2 230124254 230124307 -20563547 - MER5B DNA MER1_type -124 54 2 215 105 0 105 chr2 230124716 230124897 -20562957 + (CCCCCT)n Simple_repeat Simple_repeat 5 166 0 335 269 87 10 chr2 230125199 230125303 -20562551 + L2 LINE L2 3136 3247 -25 261 289 0 13 chr2 230125705 230125781 -20562073 + L1ME LINE L1 5759 5833 -288 29 0 0 0 chr2 230127148 230127177 -20560677 + GC_rich Low_complexity Low_complexity 1 29 0 1750 163 30 7 chr2 230127451 230127746 -20560108 - AluJb SINE Alu -10 302 1 2436 44 17 3 chr2 230128817 230129112 -20558742 + AluY SINE Alu 1 299 -12 236 38 19 57 chr2 230129500 230129553 -20558301 + (TA)n Simple_repeat Simple_repeat 1 51 0 2403 157 37 37 chr2 230131597 230132031 -20555823 - Tigger2a DNA MER2_type 0 434 1 482 161 0 23 chr2 230133726 230133813 -20554041 - AluJ/FRAM SINE Alu -3 309 225 264 81 81 0 chr2 230133819 230133856 -20553998 - AluSc SINE Alu -137 162 123 228 182 0 0 chr2 230133856 230133900 -20553954 + (TATG)n Simple_repeat Simple_repeat 2 45 0 800 151 8 0 chr2 230133916 230134042 -20553812 - AluJb SINE Alu -179 133 7 1411 199 28 79 chr2 230134844 230135235 -20552619 - MLT1A2 LTR MaLR 0 374 4 530 251 82 6 chr2 230135831 230136002 -20551852 + L1MC4a LINE L1 5696 5879 -1929 22 0 0 0 chr2 230136271 230136293 -20551561 + AT_rich Low_complexity Low_complexity 1 22 0 243 295 85 31 chr2 230136395 230136524 -20551330 + MIR SINE MIR 71 206 -56 2213 102 0 0 chr2 230136568 230136853 -20551001 + AluSx SINE Alu 20 304 -8 1202 200 161 23 chr2 230137568 230138280 -20549574 - L1ME1 LINE L1 -88 6078 5254 1965 146 3 10 chr2 230138514 230138816 -20549038 - AluSx SINE Alu -12 300 1 549 254 102 42 chr2 230142146 230142480 -20545374 + L1ME3A LINE L1 5544 5897 -224 364 273 54 52 chr2 230142531 230142694 -20545160 + L1ME3A LINE L1 5924 6095 -69 1612 153 47 19 chr2 230142769 230143090 -20544764 + L1MB1 LINE L1 5836 6165 -3 528 186 168 0 chr2 230143120 230143220 -20544634 + FLAM_C SINE Alu 1 123 -189 207 0 0 0 chr2 230143220 230143243 -20544611 + (TAA)n Simple_repeat Simple_repeat 2 24 0 528 186 168 0 chr2 230143243 230143255 -20544599 + FLAM_C SINE Alu 123 132 -180 296 140 18 0 chr2 230143303 230143360 -20544494 + L1ME4a LINE L1 5960 6017 -104 1653 164 17 17 chr2 230143476 230143768 -20544086 - AluJo SINE Alu -20 292 1 1054 223 82 14 chr2 230143817 230144108 -20543746 + L1ME1 LINE L1 5767 6077 -89 283 263 75 23 chr2 230144207 230144340 -20543514 + L1MC4a LINE L1 4697 4836 -1310 398 126 0 69 chr2 230144973 230145060 -20542794 - L1PA16 LINE L1 -5 6161 6081 288 325 26 8 chr2 230145064 230145181 -20542673 - L3b LINE CR1 -113 1470 1352 1085 57 7 14 chr2 230149728 230149868 -20537986 + AluSc SINE Alu 1 139 -170 2195 112 0 10 chr2 230149868 230150172 -20537682 + AluY SINE Alu 1 301 -10 180 236 125 14 chr2 230150267 230150339 -20537515 - MIR SINE MIR -124 138 59 370 320 129 14 chr2 230150811 230150958 -20536896 - MIR3 SINE MIR -21 187 24 229 249 155 0 chr2 230151088 230151177 -20536677 - MIR SINE MIR -65 143 65 28 71 0 0 chr2 230151271 230151327 -20536527 + AT_rich Low_complexity Low_complexity 1 56 0 681 200 0 8 chr2 230151553 230151678 -20536176 + AluJo SINE Alu 6 129 -183 1763 262 65 25 chr2 230152925 230153643 -20534211 + L1MC4a LINE L1 5306 6052 -1756 2257 91 3 3 chr2 230153816 230154114 -20533740 + AluSx SINE Alu 4 301 -11 740 42 0 0 chr2 230154168 230154263 -20533591 + L1PA8 LINE L1 5878 5972 -200 * 751 195 19 0 chr2 230154252 230154411 -20533443 + L1MC4 LINE L1 6921 7082 -960 2098 216 98 23 chr2 230154418 230154829 -20533025 + L1MC4 LINE L1 7246 7719 -323 2174 112 58 30 chr2 230154829 230155194 -20532660 + THE1C LTR MaLR 1 375 0 2098 216 98 23 chr2 230155194 230155393 -20532461 + L1MC4 LINE L1 7719 7902 -140 21 71 0 0 chr2 230155411 230155453 -20532401 + AT_rich Low_complexity Low_complexity 1 42 0 40247 67 6 7 chr2 230155549 230161697 -20526157 + L1PA5 LINE L1 11 6154 0 827 241 16 56 chr2 230161737 230162060 -20525794 + L1MC5 LINE L1 7603 7912 -49 981 181 0 39 chr2 230162206 230162411 -20525443 + AluJo SINE Alu 115 311 -1 456 200 36 9 chr2 230163257 230163367 -20524487 - MLT1J LTR MaLR -6 505 393 1188 197 63 28 chr2 230163938 230164192 -20523662 + Tigger7 DNA MER2_type 1 263 -2224 601 174 0 20 chr2 230164194 230164292 -20523562 + Tigger7 DNA MER2_type 2391 2486 -1 2176 153 119 186 chr2 230164321 230164768 -20523086 + MER106B DNA MER1_type 1 476 -583 404 211 211 0 chr2 230164768 230164891 -20522963 + FLAM_A SINE Alu 2 144 0 910 146 64 35 chr2 230164891 230165062 -20522792 + AluJb SINE Alu 133 308 -4 2176 153 119 186 chr2 230165062 230165145 -20522709 + MER106B DNA MER1_type 475 562 -497 1293 183 91 40 chr2 230165145 230165419 -20522435 + AluJo SINE Alu 1 288 -24 2176 153 119 186 chr2 230165419 230165849 -20522005 + MER106B DNA MER1_type 562 1058 -1 199 362 68 23 chr2 230168834 230169055 -20518799 + L2 LINE L2 2509 2739 -575 21 0 0 0 chr2 230170104 230170125 -20517729 + AT_rich Low_complexity Low_complexity 1 21 0 357 210 117 64 chr2 230170726 230170977 -20516877 - L1M4 LINE L1 -1581 4565 4304 23 33 0 0 chr2 230170977 230171007 -20516847 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 230171390 230171411 -20516443 + AT_rich Low_complexity Low_complexity 1 21 0 449 240 78 8 chr2 230171509 230171638 -20516216 - MIR SINE MIR -61 201 64 212 87 67 29 chr2 230171649 230171753 -20516101 + (TTATA)n Simple_repeat Simple_repeat 4 111 0 2458 67 0 7 chr2 230171934 230172234 -20515620 + AluY SINE Alu 1 298 -13 1700 161 3 60 chr2 230172555 230172872 -20514982 - AluJb SINE Alu -13 299 1 369 136 0 0 chr2 230173158 230173224 -20514630 + (TC)n Simple_repeat Simple_repeat 2 67 0 1689 144 45 61 chr2 230173635 230173948 -20513906 + AluJo SINE Alu 1 308 -4 341 278 110 18 chr2 230175191 230175462 -20512392 + L1M4 LINE L1 5532 5835 -302 21 0 0 0 chr2 230175643 230175664 -20512190 + AT_rich Low_complexity Low_complexity 1 21 0 223 206 15 23 chr2 230178487 230178573 -20509281 + A-rich Low_complexity Low_complexity 1 130 0 799 254 60 0 chr2 230178725 230178926 -20508928 - MIR SINE MIR -21 241 29 188 65 0 32 chr2 230179408 230179439 -20508415 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 747 238 0 7 chr2 230179464 230179611 -20508243 - FRAM SINE Alu -30 146 1 198 309 90 12 chr2 230180295 230180398 -20507456 + MIR SINE MIR 44 151 -63 645 225 30 68 chr2 230181239 230181272 -20506582 + L1MC5 LINE L1 7700 7733 -228 1890 136 34 3 chr2 230181272 230181566 -20506288 + AluSg SINE Alu 1 303 -7 645 225 30 68 chr2 230181566 230181768 -20506086 + L1MC5 LINE L1 7733 7926 -35 921 171 6 29 chr2 230182252 230182427 -20505427 - FRAM SINE Alu -10 166 1 1477 212 34 0 chr2 230182562 230182855 -20504999 + AluJo SINE Alu 1 303 -9 735 311 129 9 chr2 230183249 230183712 -20504142 + L2 LINE L2 2586 3097 -216 954 181 109 64 chr2 230184031 230184305 -20503549 + L1MC5 LINE L1 7302 7597 -364 2133 80 0 0 chr2 230184305 230184567 -20503287 + AluSc SINE Alu 40 301 -8 954 181 109 64 chr2 230184567 230184651 -20503203 + L1MC5 LINE L1 7597 7676 -285 948 158 22 16 chr2 230185129 230185312 -20502542 + L1PA16 LINE L1 5977 6160 -6 1994 150 3 0 chr2 230185312 230185618 -20502236 + AluSx SINE Alu 1 307 -5 2248 67 3 20 chr2 230186568 230186866 -20500988 + AluYa5 SINE Alu 3 295 -16 1280 111 0 11 chr2 230186867 230187048 -20500806 + AluSg/x SINE Alu 134 312 0 22 0 0 0 chr2 230187601 230187623 -20500231 + AT_rich Low_complexity Low_complexity 1 22 0 216 213 66 0 chr2 230188270 230188331 -20499523 + MIR SINE MIR 185 249 -13 487 147 0 0 chr2 230189005 230189080 -20498774 - AluSg/x SINE Alu -18 291 217 1141 113 0 0 chr2 230189080 230189230 -20498624 - AluSq SINE Alu -160 153 4 227 155 241 0 chr2 230189360 230189418 -20498436 - MER113 DNA MER1_type? -408 113 42 25 0 0 0 chr2 230190227 230190252 -20497602 + AT_rich Low_complexity Low_complexity 1 25 0 272 152 87 0 chr2 230190537 230190583 -20497271 + L2 LINE L2 3262 3311 -2 357 302 70 29 chr2 230193191 230193363 -20494491 + MER5A DNA MER1_type 9 187 -2 297 342 145 0 chr2 230193414 230193572 -20494282 - MIR SINE MIR -19 243 63 187 329 41 0 chr2 230193578 230193651 -20494203 + L2 LINE L2 3238 3313 0 2404 82 16 7 chr2 230193675 230193979 -20493875 + AluSx SINE Alu 1 307 -5 2404 87 0 10 chr2 230194462 230194774 -20493080 + AluY SINE Alu 1 309 -2 1298 227 125 31 chr2 230194849 230195338 -20492516 + MLT1H LTR MaLR 13 547 -2 1546 106 12 25 chr2 230195921 230196166 -20491688 + L1MA5 LINE L1 6059 6300 0 560 278 102 6 chr2 230196265 230196441 -20491413 + MIR SINE MIR 38 230 -32 24 32 0 0 chr2 230197006 230197037 -20490817 + AT_rich Low_complexity Low_complexity 1 31 0 1829 166 0 0 chr2 230197461 230197751 -20490103 - AluJo SINE Alu -22 290 1 374 293 211 0 chr2 230198204 230198337 -20489517 + MIR SINE MIR 31 191 -71 31 0 0 0 chr2 230198510 230198541 -20489313 + AT_rich Low_complexity Low_complexity 1 31 0 190 156 0 0 chr2 230199111 230199143 -20488711 + L2 LINE L2 3281 3312 -1 1624 136 25 0 chr2 230199506 230199749 -20488105 + AluSp SINE Alu 1 249 -64 526 133 11 11 chr2 230199774 230199864 -20487990 + AluSp/q SINE Alu 221 310 -3 592 309 139 22 chr2 230199938 230200161 -20487693 - MIR SINE MIR -3 259 11 1013 175 12 12 chr2 230200378 230200544 -20487310 + FRAM SINE Alu 1 166 0 180 77 0 0 chr2 230200551 230200577 -20487277 + (A)n Simple_repeat Simple_repeat 1 26 0 347 272 11 0 chr2 230200588 230200680 -20487174 + L1ME LINE L1 500 592 -5478 21 36 0 0 chr2 230201036 230201064 -20486790 + AT_rich Low_complexity Low_complexity 1 28 0 2523 70 3 0 chr2 230201112 230201414 -20486440 + AluSp SINE Alu 2 304 -9 21 57 0 0 chr2 230201466 230201501 -20486353 + AT_rich Low_complexity Low_complexity 1 35 0 363 277 7 108 chr2 230201860 230202008 -20485846 + MER5B DNA MER1_type 1 133 -45 2018 168 0 0 chr2 230203508 230203817 -20484037 + AluJb SINE Alu 1 309 -3 2075 81 74 3 chr2 230203835 230204118 -20483736 + AluY SINE Alu 1 303 -8 511 279 107 42 chr2 230204397 230204827 -20483027 + L1ME LINE L1 444 901 -5169 1396 222 189 8 chr2 230204832 230205336 -20482518 + L1MEc LINE L1 44 638 -5758 904 201 65 55 chr2 230205346 230205425 -20482429 + L1M4 LINE L1 3147 3224 -2922 1569 173 28 14 chr2 230205425 230205714 -20482140 + AluJo SINE Alu 12 304 -8 904 201 65 55 chr2 230205714 230205927 -20481927 + L1M4 LINE L1 3224 3442 -2704 23 54 0 0 chr2 230206472 230206509 -20481345 + AT_rich Low_complexity Low_complexity 1 37 0 335 264 24 32 chr2 230207152 230207277 -20480577 + GA-rich Low_complexity Low_complexity 3 126 0 215 293 35 0 chr2 230207549 230207607 -20480247 - L2 LINE L2 -67 3205 3146 1182 209 9 5 chr2 230207919 230208139 -20479715 + AluJo SINE Alu 1 221 -91 308 67 44 0 chr2 230208139 230208184 -20479670 + AluJb SINE Alu 87 133 -169 1596 184 17 7 chr2 230208187 230208481 -20479373 + AluJb SINE Alu 1 297 -15 567 277 32 117 chr2 230208735 230209017 -20478837 + L3 LINE CR1 1318 1575 -2 211 345 36 43 chr2 230209027 230209166 -20478688 + MER5A DNA MER1_type 52 189 0 630 179 162 0 chr2 230209174 230209330 -20478524 - MER5A DNA MER1_type 0 189 6 2245 108 3 3 chr2 230209714 230210011 -20477843 - AluSx SINE Alu -15 297 1 381 208 158 0 chr2 230210020 230210121 -20477733 - MIR3 SINE MIR -11 197 81 21 0 0 0 chr2 230210739 230210760 -20477094 + AT_rich Low_complexity Low_complexity 1 21 0 1093 203 47 0 chr2 230210976 230211188 -20476666 + MER58A DNA MER1_type 1 222 -2 338 274 9 19 chr2 230212066 230212172 -20475682 + GA-rich Low_complexity Low_complexity 1 105 0 2115 146 24 15 chr2 230212335 230212671 -20475183 - MER44D DNA MER2_type 0 609 1 411 222 49 152 chr2 230212816 230213021 -20474833 - MIR3 SINE MIR -6 202 19 900 92 8 0 chr2 230215349 230215468 -20472386 + AluSp/q SINE Alu 157 276 -37 843 117 8 8 chr2 230215483 230215603 -20472251 + AluSq/x SINE Alu 1 120 -193 519 145 244 8 chr2 230215603 230215734 -20472120 - MER5A DNA MER1_type -22 167 6 2415 89 3 10 chr2 230216655 230216969 -20470885 + AluSx SINE Alu 1 312 0 352 310 37 78 chr2 230217216 230217458 -20470396 + MIR SINE MIR 29 260 -2 431 385 56 0 chr2 230217618 230217797 -20470057 - L2 LINE L2 -8 3264 3076 345 141 0 31 chr2 230218342 230218406 -20469448 + MLT1F LTR MaLR 4 65 -477 1087 200 61 12 chr2 230218406 230218651 -20469203 + MLT1F1 LTR MaLR 310 566 -1 266 125 0 0 chr2 230218651 230218691 -20469163 + MLT1F1 LTR MaLR 528 567 0 349 230 11 23 chr2 230218691 230218778 -20469076 + MLT1F-int LTR MaLR 1 86 -1285 638 288 96 11 chr2 230218830 230219111 -20468743 + MLT1F-int LTR MaLR 291 595 -776 1057 274 37 101 chr2 230219385 230220038 -20467816 + MLT1F-int LTR MaLR 756 1366 -5 2050 218 48 50 chr2 230220044 230220582 -20467272 + MLT1F LTR MaLR 2 538 -4 1697 161 32 0 chr2 230221341 230221620 -20466234 - AluJo SINE Alu -12 300 13 2148 138 49 9 chr2 230221888 230222235 -20465619 + MER46B DNA MER2_type 1 236 0 2140 81 24 7 chr2 230222627 230222925 -20464929 + AluSg1 SINE Alu 1 303 -6 471 261 278 8 chr2 230223061 230223302 -20464552 + L2 LINE L2 3003 3308 -5 201 286 24 24 chr2 230223422 230223506 -20464348 + L2 LINE L2 3228 3311 -2 658 238 92 22 chr2 230224466 230224693 -20463161 + MLT1D LTR MaLR 1 243 -262 1150 66 84 12 chr2 230224740 230224906 -20462948 + L1PA11 LINE L1 5969 6146 -28 693 222 74 6 chr2 230224912 230225088 -20462766 + MLT1D LTR MaLR 318 505 0 274 180 60 0 chr2 230225091 230225141 -20462713 - MIR SINE MIR -98 164 112 2040 155 0 0 chr2 230225440 230225749 -20462105 + AluSx SINE Alu 2 310 -2 332 222 60 51 chr2 230225821 230225884 -20461970 + MIR SINE MIR 111 177 -85 1512 170 67 4 chr2 230225884 230226154 -20461700 + AluJb SINE Alu 12 298 -14 332 222 60 51 chr2 230226154 230226207 -20461647 + MIR SINE MIR 177 228 -34 1246 298 46 20 chr2 230226569 230227154 -20460700 + L1ME3A LINE L1 5344 5964 -206 2304 187 89 35 chr2 230227271 230227656 -20460198 - MLT2B1 LTR ERVL 0 520 101 2215 122 10 0 chr2 230227656 230227952 -20459902 + AluSx SINE Alu 1 299 -13 2304 187 89 35 chr2 230227952 230228059 -20459795 - MLT2B1 LTR ERVL -419 101 1 2149 94 45 0 chr2 230228287 230228575 -20459279 - AluSq SINE Alu -12 301 1 560 319 91 51 chr2 230228601 230229174 -20458680 - L1M4 LINE L1 -1000 5146 4551 484 281 19 36 chr2 230229261 230229471 -20458383 + L2 LINE L2 3055 3299 -14 402 245 135 42 chr2 230229595 230229832 -20458022 + L1ME4a LINE L1 5411 5669 -452 422 263 9 9 chr2 230229838 230229952 -20457902 + L1ME4a LINE L1 5713 5826 -295 2382 80 0 3 chr2 230229963 230230262 -20457592 - AluSc SINE Alu -11 298 1 1235 180 4 18 chr2 230230350 230230578 -20457276 - AluJo SINE Alu -2 310 86 278 261 0 61 chr2 230230602 230230626 -20457228 + L1ME4a LINE L1 5920 5944 -177 2116 135 0 10 chr2 230230626 230230929 -20456925 + AluSq SINE Alu 1 300 -13 278 261 0 61 chr2 230230929 230231019 -20456835 + L1ME4a LINE L1 5944 6027 -94 242 200 105 105 chr2 230231456 230231551 -20456303 + MIR SINE MIR 117 211 -51 2505 74 0 6 chr2 230232000 230232311 -20455543 - AluY SINE Alu -2 309 1 441 335 57 16 chr2 230232494 230232688 -20455166 + MIR SINE MIR 51 252 -10 391 317 65 62 chr2 230232749 230232867 -20454987 + L2 LINE L2 2161 2277 -1037 2445 80 0 10 chr2 230232867 230233180 -20454674 - AluY SINE Alu -1 310 1 391 317 65 62 chr2 230233180 230233399 -20454455 + L2 LINE L2 2277 2499 -815 318 319 81 67 chr2 230233779 230234124 -20453730 - L2 LINE L2 -398 2916 2567 1897 189 8 40 chr2 230234157 230234533 -20453321 - MLT1A1 LTR MaLR 0 365 2 1992 113 7 17 chr2 230234860 230235151 -20452703 + AluSx SINE Alu 1 288 -24 384 40 0 0 chr2 230235633 230235683 -20452171 + (TG)n Simple_repeat Simple_repeat 1 50 0 223 269 54 32 chr2 230236870 230236963 -20450891 + L2 LINE L2 2585 2679 -635 426 280 45 38 chr2 230237044 230237176 -20450678 + L2 LINE L2 3137 3269 -3 297 282 48 29 chr2 230237178 230237281 -20450573 + L2 LINE L2 3197 3301 -12 237 287 287 20 chr2 230237336 230237486 -20450368 + MIR SINE MIR 53 242 -20 21 0 0 0 chr2 230237794 230237815 -20450039 + AT_rich Low_complexity Low_complexity 1 21 0 334 308 124 74 chr2 230237884 230238283 -20449571 + L2 LINE L2 2737 3202 -70 1467 207 32 70 chr2 230238283 230238751 -20449103 + LTR7 LTR ERV1 1 450 0 334 308 124 74 chr2 230238751 230238826 -20449028 + L2 LINE L2 3202 3272 0 23 0 0 0 chr2 230239597 230239620 -20448234 + GC_rich Low_complexity Low_complexity 1 23 0 379 268 12 18 chr2 230239806 230239943 -20447911 - L1ME2 LINE L1 0 6166 6029 416 210 0 12 chr2 230240513 230240594 -20447260 + MER5B DNA MER1_type 1 80 -98 2266 81 3 0 chr2 230240600 230240923 -20446931 - AluSp SINE Alu 0 324 1 198 186 0 23 chr2 230241068 230241111 -20446743 - MIR SINE MIR -63 199 158 853 234 66 25 chr2 230241138 230241382 -20446472 - MIR SINE MIR -1 261 8 505 212 83 15 chr2 230241703 230241835 -20446019 - MIR SINE MIR -63 199 59 945 243 88 72 chr2 230242023 230242170 -20445684 - L1MC5 LINE L1 -51 7910 7767 1178 139 89 0 chr2 230242170 230242372 -20445482 - L1PA15 LINE L1 -4 6161 5942 945 243 88 72 chr2 230242372 230242546 -20445308 - L1MC5 LINE L1 -194 7767 7597 840 165 0 15 chr2 230242546 230242679 -20445175 - FLAM_C SINE Alu 0 133 3 945 243 88 72 chr2 230242679 230243047 -20444807 - L1MC5 LINE L1 -364 7597 7261 253 242 52 59 chr2 230243106 230243181 -20444673 - L1MC4 LINE L1 -746 7215 7141 2349 44 0 0 chr2 230243181 230243453 -20444401 - AluY SINE Alu -3 308 37 253 242 52 59 chr2 230243453 230243669 -20444185 - L1MC4 LINE L1 -820 7141 6956 812 128 0 24 chr2 230243861 230243986 -20443868 - FLAM_C SINE Alu -10 133 12 207 0 0 0 chr2 230243993 230244016 -20443838 + (ATCTG)n Simple_repeat Simple_repeat 1 23 0 1733 244 59 2 chr2 230244016 230244488 -20443366 - L1ME2 LINE L1 -203 5961 5458 1005 89 0 0 chr2 230245009 230245132 -20442722 + AluY SINE Alu 1 123 -188 3046 201 25 40 chr2 230245977 230246369 -20441485 - L1ME2 LINE L1 -749 5397 5001 2187 108 0 14 chr2 230246369 230246666 -20441188 + AluSq SINE Alu 1 293 -20 3046 201 25 40 chr2 230246666 230247206 -20440648 - L1ME2 LINE L1 -1145 5001 4566 769 162 167 24 chr2 230247229 230247400 -20440454 - L1MC4 LINE L1 -204 7838 7630 1544 175 161 36 chr2 230247400 230247841 -20440013 + LTR54B LTR ERV1 1 496 -2 769 162 167 24 chr2 230247841 230247879 -20439975 - L1MC4 LINE L1 -412 7630 7599 2130 234 123 24 chr2 230248861 230249529 -20438325 - MER21B LTR ERV1 -111 752 19 348 225 11 45 chr2 230249560 230249649 -20438205 - MER21B LTR ERV1 -773 90 5 383 170 11 85 chr2 230249650 230249744 -20438110 + L1MB1 LINE L1 6081 6167 -1 573 248 250 77 chr2 230249767 230250287 -20437567 - L1MC4 LINE L1 -67 7975 7366 2037 185 21 74 chr2 230250318 230250632 -20437222 + L1MB5 LINE L1 5681 5950 -224 1877 182 0 0 chr2 230250632 230250934 -20436920 + AluJo SINE Alu 1 302 -10 2037 185 21 74 chr2 230250934 230251148 -20436706 + L1MB5 LINE L1 5950 6174 0 2269 103 3 0 chr2 230251156 230251447 -20436407 + AluSx SINE Alu 1 292 -20 2266 116 0 7 chr2 230251832 230252135 -20435719 + AluSx SINE Alu 1 301 -11 340 270 129 58 chr2 230252311 230252406 -20435448 + L1ME LINE L1 5538 5625 -496 2277 103 0 0 chr2 230252406 230252698 -20435156 - AluSg SINE Alu -18 292 1 340 270 129 58 chr2 230252698 230252843 -20435011 + L1ME LINE L1 5625 5795 -326 315 348 132 13 chr2 230253091 230253318 -20434536 - MIR SINE MIR 0 262 9 2252 113 7 0 chr2 230253413 230253723 -20434131 - AluSq SINE Alu -1 312 1 302 214 83 12 chr2 230254091 230254175 -20433679 + MIR SINE MIR 103 192 -70 2298 116 0 3 chr2 230254656 230254967 -20432887 + AluSx SINE Alu 3 312 0 192 250 0 0 chr2 230255217 230255257 -20432597 - MIR SINE MIR -1 261 222 369 167 0 0 chr2 230255407 230255473 -20432381 - L1M4 LINE L1 -3642 2504 2439 263 288 24 48 chr2 230255761 230255886 -20431968 + MIR3 SINE MIR 63 184 -24 285 253 20 71 chr2 230255913 230256012 -20431842 + MIR SINE MIR 159 252 -10 425 152 101 20 chr2 230256604 230256703 -20431151 + MER31-int LTR ERV1 736 842 -6695 2125 125 0 10 chr2 230256901 230257212 -20430642 - AluSx SINE Alu -4 308 1 2265 105 7 0 chr2 230257223 230257518 -20430336 - AluSc SINE Alu -12 297 1 301 189 0 89 chr2 230257520 230257610 -20430244 + MER31-int LTR ERV1 908 989 -4134 396 256 0 0 chr2 230257612 230257698 -20430156 + MER34C LTR ERV1 158 243 -342 1889 143 3 23 chr2 230257847 230258154 -20429700 - AluSx SINE Alu -11 301 1 254 266 145 8 chr2 230258204 230258328 -20429526 + MER31-int LTR ERV1 1869 2009 -4589 351 213 13 13 chr2 230258549 230258624 -20429230 + MER31-int LTR ERV1 1116 1190 -5141 2072 146 0 3 chr2 230258637 230258945 -20428909 + AluJb SINE Alu 5 311 -1 245 291 18 0 chr2 230258969 230259024 -20428830 + tRNA-Glu-GAG tRNA tRNA 20 75 0 1784 210 26 49 chr2 230259043 230259496 -20428358 + MER31-int LTR ERV1 2678 3120 -3211 724 254 65 55 chr2 230259213 230259610 -20428244 + LTR57-int LTR ERVL 774 1388 -3955 * 2364 103 0 0 chr2 230259610 230259912 -20427942 + AluSc SINE Alu 1 302 -7 724 254 65 55 chr2 230259912 230260038 -20427816 + LTR57-int LTR ERVL 1388 1511 -3832 458 264 16 47 chr2 230260047 230260240 -20427614 + MER31-int LTR ERV1 1679 1865 -3071 794 181 0 0 chr2 230260390 230260517 -20427337 + FLAM_C SINE Alu 2 128 -5 636 157 17 148 chr2 230260517 230260636 -20427218 + MER31-int LTR ERV1 2713 2846 -2186 2224 96 0 3 chr2 230260636 230260927 -20426927 + AluSx SINE Alu 1 290 -22 636 157 17 148 chr2 230260927 230261102 -20426752 + MER31-int LTR ERV1 2846 3082 -1950 1811 159 30 3 chr2 230261102 230261397 -20426457 + AluSx SINE Alu 1 303 -9 3069 134 8 77 chr2 230261435 230262075 -20425779 + MER31-int LTR ERV1 3712 4307 -2024 831 75 9 0 chr2 230262075 230262181 -20425673 - THE1B LTR MaLR 0 364 258 2689 92 46 27 chr2 230262195 230262608 -20425246 + LTR43 LTR ERV1 175 595 -7 5862 90 24 28 chr2 230262694 230263059 -20424795 - L1PB2 LINE L1 -2 6149 5784 618 113 0 0 chr2 230263059 230263156 -20424698 + (TA)n Simple_repeat Simple_repeat 2 98 0 5862 90 24 28 chr2 230263156 230263194 -20424660 - L1PB2 LINE L1 -367 5784 5747 2334 130 74 0 chr2 230263194 230263533 -20424321 - THE1B LTR MaLR 0 364 1 5862 90 24 28 chr2 230263533 230263999 -20423855 - L1PB2 LINE L1 -404 5747 5282 426 119 17 0 chr2 230264114 230264173 -20423681 - FLAM SINE Alu -36 107 48 2169 119 3 3 chr2 230264265 230264567 -20423287 - AluSx SINE Alu -10 302 1 531 199 0 0 chr2 230264629 230264956 -20422898 + (TG)n Simple_repeat Simple_repeat 1 327 0 292 336 73 7 chr2 230265119 230265256 -20422598 - L2 LINE L2 0 3272 3127 2115 158 52 29 chr2 230265515 230265896 -20421958 + MLT1B LTR MaLR 1 390 0 305 206 0 16 chr2 230266905 230266968 -20420886 - AluYb8 SINE Alu -6 302 241 712 128 0 0 chr2 230266982 230267076 -20420778 - AluS SINE Alu -217 95 2 327 283 99 7 chr2 230267114 230267266 -20420588 + L1ME4a LINE L1 5956 6121 0 32 0 0 0 chr2 230267266 230267298 -20420556 + AT_rich Low_complexity Low_complexity 1 32 0 2222 103 0 3 chr2 230267368 230267668 -20420186 + AluSx SINE Alu 1 299 -13 326 417 0 0 chr2 230267950 230268058 -20419796 + L2 LINE L2 3123 3230 -42 447 259 43 0 chr2 230268062 230268192 -20419662 + LTR33 LTR ERVL 2 137 -384 228 258 15 15 chr2 230268192 230268258 -20419596 - MER69 DNA AcHobo 0 2526 2461 797 179 0 0 chr2 230268269 230268386 -20419468 + FLAM_C SINE Alu 2 118 -25 981 199 249 9 chr2 230268399 230268740 -20419114 - MER69 DNA AcHobo -54 2472 2050 270 81 0 0 chr2 230268852 230268889 -20418965 + (CA)n Simple_repeat Simple_repeat 1 37 0 659 284 131 4 chr2 230268929 230269158 -20418696 - MER69 DNA AcHobo -2119 407 150 1147 159 0 53 chr2 230269174 230269381 -20418473 + AluJb SINE Alu 1 196 -116 402 296 65 0 chr2 230270034 230270142 -20417712 + L2 LINE L2 3142 3256 -16 1952 148 0 7 chr2 230270382 230270685 -20417169 + AluJb SINE Alu 1 301 -11 2134 122 10 3 chr2 230270689 230270992 -20416862 + AluSx SINE Alu 4 308 -4 257 299 23 0 chr2 230271496 230271583 -20416271 - MER117 DNA MER1_type -108 89 1 2090 102 0 11 chr2 230271589 230271917 -20415937 - AluSq SINE Alu 0 326 2 445 302 65 44 chr2 230272380 230272718 -20415136 - L2 LINE L2 -473 2841 2497 358 247 82 0 chr2 230272734 230272819 -20415035 + L2 LINE L2 3181 3272 0 575 314 105 28 chr2 230272882 230273271 -20414583 - L2 LINE L2 -880 2434 2016 180 0 0 0 chr2 230273858 230273878 -20413976 + (T)n Simple_repeat Simple_repeat 1 20 0 2434 133 28 19 chr2 230273886 230274247 -20413607 - THE1B LTR MaLR 0 364 1 526 197 42 63 chr2 230274391 230274533 -20413321 - MER91C DNA MER1_type 0 140 2 6720 72 9 8 chr2 230276177 230277073 -20410781 - L1PB1 LINE L1 0 6151 5255 1630 198 3 3 chr2 230277167 230277475 -20410379 + AluJo SINE Alu 1 308 -4 2226 93 31 3 chr2 230277986 230278276 -20409578 - AluSp SINE Alu -7 306 9 677 136 0 10 chr2 230278306 230278409 -20409445 - U13 snRNA snRNA -1 103 2 2451 80 0 0 chr2 230279412 230279711 -20408143 - AluSc SINE Alu -10 299 1 2405 90 0 6 chr2 230279896 230280207 -20407647 - AluY SINE Alu -2 309 1 978 154 12 0 chr2 230281523 230281685 -20406169 + AluSg/x SINE Alu 137 300 -12 232 167 0 0 chr2 230281685 230281721 -20406133 + polypurine Low_complexity Low_complexity 1 36 0 672 157 22 22 chr2 230281721 230281899 -20405955 + GA-rich Low_complexity Low_complexity 1 178 0 464 154 65 12 chr2 230281917 230282086 -20405768 + GA-rich Low_complexity Low_complexity 3 180 0 183 139 0 0 chr2 230282087 230282123 -20405731 + (GGGGA)n Simple_repeat Simple_repeat 4 39 0 240 325 99 46 chr2 230282251 230282402 -20405452 + MIR SINE MIR 49 207 -55 1035 236 142 49 chr2 230282513 230283043 -20404811 + L1MC4 LINE L1 7464 8042 0 549 139 65 37 chr2 230283158 230283266 -20404588 + AluSg/x SINE Alu 198 308 -1 23 0 0 0 chr2 230283294 230283317 -20404537 + AT_rich Low_complexity Low_complexity 1 23 0 1167 215 80 8 chr2 230283392 230283795 -20404059 - MER34 LTR ERV1 0 542 69 274 23 23 23 chr2 230283795 230283839 -20404015 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 1167 215 80 8 chr2 230283839 230283902 -20403952 - MER34 LTR ERV1 -473 69 12 2634 37 0 0 chr2 230284752 230285049 -20402805 + AluY SINE Alu 1 297 -14 182 244 26 90 chr2 230285101 230285179 -20402675 - MIR SINE MIR -71 191 119 3968 100 49 0 chr2 230285300 230285828 -20402026 - MER41A LTR ERV1 0 554 1 300 276 67 9 chr2 230286057 230286162 -20401692 + MIR SINE MIR 94 204 -58 2120 135 0 0 chr2 230286600 230286897 -20400957 + AluSx SINE Alu 1 297 -15 190 324 84 0 chr2 230287251 230287322 -20400532 - MIR3 SINE MIR -21 187 111 1682 189 16 7 chr2 230287322 230287628 -20400226 + AluSx SINE Alu 1 309 -3 200 42 0 0 chr2 230287629 230287653 -20400201 + (GGAA)n Simple_repeat Simple_repeat 3 26 0 647 185 35 12 chr2 230287654 230287827 -20400027 + GA-rich Low_complexity Low_complexity 1 177 0 279 156 278 11 chr2 230287866 230287956 -20399898 - MIR SINE MIR -78 130 17 2170 110 0 16 chr2 230288476 230288793 -20399061 - AluSx SINE Alu 0 312 1 280 257 53 81 chr2 230289085 230289370 -20398484 - L1MC4a LINE L1 -137 5984 5706 1656 102 0 34 chr2 230289503 230289738 -20398116 + AluSx SINE Alu 64 290 -22 31 0 0 0 chr2 230290306 230290337 -20397517 + AT_rich Low_complexity Low_complexity 1 31 0 2130 116 0 0 chr2 230290657 230290977 -20396877 + AluSx SINE Alu 1 320 0 2369 99 0 0 chr2 230291492 230291796 -20396058 + AluSx SINE Alu 1 304 -8 358 302 19 0 chr2 230291862 230291968 -20395886 + L2 LINE L2 3206 3313 0 2378 87 0 23 chr2 230293155 230293465 -20394389 + AluSq SINE Alu 1 303 -10 182 324 81 0 chr2 230294569 230294643 -20393211 - MIR3 SINE MIR -21 187 108 22 0 0 0 chr2 230295194 230295216 -20392638 + AT_rich Low_complexity Low_complexity 1 22 0 325 265 31 0 chr2 230295727 230295825 -20392029 + (TA)n Simple_repeat Simple_repeat 1 101 0 884 125 25 12 chr2 230296488 230296648 -20391206 + L1MB7 LINE L1 6012 6173 -11 2237 121 0 0 chr2 230296855 230297162 -20390692 + AluSx SINE Alu 1 307 -5 341 340 73 30 chr2 230297286 230297518 -20390336 - MIR SINE MIR 0 262 21 2227 93 0 42 chr2 230297614 230297924 -20389930 + AluSc SINE Alu 1 297 -12 2244 92 7 0 chr2 230298181 230298500 -20389354 + AluSx SINE Alu 1 321 0 246 208 50 10 chr2 230298970 230299071 -20388783 + (TA)n Simple_repeat Simple_repeat 2 106 0 2089 145 0 0 chr2 230299177 230299473 -20388381 + AluJb SINE Alu 1 296 -16 2279 106 103 0 chr2 230300202 230300532 -20387322 - THE1B LTR MaLR 0 364 1 10753 97 51 4 chr2 230300532 230302041 -20385813 - THE1B-int LTR MaLR 0 1580 1 2613 108 11 3 chr2 230302041 230302402 -20385452 - THE1B LTR MaLR 0 364 1 2316 90 0 32 chr2 230303304 230303614 -20384240 + AluY SINE Alu 1 300 -11 2068 145 0 0 chr2 230303621 230303918 -20383936 + AluSx SINE Alu 3 299 -13 1844 159 0 10 chr2 230303932 230304222 -20383632 + AluJo SINE Alu 4 290 -22 343 217 14 0 chr2 230304573 230304642 -20383212 - MER81 DNA DNA 0 114 45 1807 225 66 7 chr2 230304679 230305106 -20382748 - MER41B LTR ERV1 -36 599 148 228 211 0 0 chr2 230305143 230305181 -20382673 - MER81 DNA DNA -76 38 1 1423 180 120 0 chr2 230305260 230305527 -20382327 - AluSg SINE Alu -11 299 1 2326 109 0 0 chr2 230306042 230306344 -20381510 + AluSx SINE Alu 1 302 -10 234 0 0 0 chr2 230306344 230306370 -20381484 + (TA)n Simple_repeat Simple_repeat 2 27 0 2338 85 7 26 chr2 230306532 230306839 -20381015 + AluSx SINE Alu 1 301 -11 255 298 0 0 chr2 230307683 230307740 -20380114 - MLT1L LTR MaLR -211 404 348 1553 149 3 110 chr2 230307758 230308093 -20379761 - AluJb SINE Alu -3 299 1 306 194 32 0 chr2 230308122 230308184 -20379670 - MLT1L LTR MaLR -347 268 205 270 222 12 62 chr2 230308155 230308236 -20379618 - MLT1J LTR MaLR -341 170 94 * 1280 237 80 0 chr2 230308242 230308554 -20379300 - MER58B DNA MER1_type -1 340 4 1608 199 0 4 chr2 230309011 230309292 -20378562 - AluJo SINE Alu -30 282 3 324 189 55 24 chr2 230309428 230309555 -20378299 + (TA)n Simple_repeat Simple_repeat 2 132 0 807 289 122 76 chr2 230309583 230309659 -20378195 - MLT1K LTR MaLR -63 525 454 2237 119 3 3 chr2 230309659 230309970 -20377884 + AluSx SINE Alu 1 311 -1 807 289 122 76 chr2 230309970 230310321 -20377533 - MLT1K LTR MaLR -134 454 75 2600 64 0 0 chr2 230310321 230310632 -20377222 + AluY SINE Alu 1 311 0 191 388 21 16 chr2 230310824 230311012 -20376842 - MER5A DNA MER1_type 0 189 1 869 288 85 29 chr2 230311033 230311411 -20376443 - MLT1J LTR MaLR -16 495 97 351 0 0 0 chr2 230311451 230311490 -20376364 + (CA)n Simple_repeat Simple_repeat 2 40 0 1659 266 122 46 chr2 230311546 230312530 -20375324 + HAL1 LINE L1 2 1060 -1447 560 276 139 9 chr2 230312497 230312820 -20375034 + HAL1 LINE L1 2140 2504 -3 * 442 204 111 58 chr2 230313363 230313571 -20374283 + MLT1L LTR MaLR 110 392 -223 264 315 168 21 chr2 230314157 230314300 -20373554 - MIR SINE MIR -70 192 29 406 267 64 27 chr2 230314995 230315182 -20372672 + MIR SINE MIR 69 262 0 1709 134 84 37 chr2 230315295 230315593 -20372261 + AluSx SINE Alu 1 312 0 1093 158 57 44 chr2 230315607 230315835 -20372019 + AluJo SINE Alu 82 312 0 219 366 0 12 chr2 230316401 230316483 -20371371 + L2 LINE L2 3106 3186 -86 453 293 12 48 chr2 230316775 230316942 -20370912 + MIR3 SINE MIR 30 190 -18 481 272 28 42 chr2 230317372 230317589 -20370265 + L2 LINE L2 3100 3313 0 4847 159 54 15 chr2 230317893 230318873 -20368981 - L1MB7 LINE L1 -16 6168 5134 4109 143 36 15 chr2 230319103 230319776 -20368078 - LTR8 LTR ERV1 -4 687 1 283 270 0 40 chr2 230319904 230319983 -20367871 - MIR SINE MIR -78 130 54 2798 110 11 40 chr2 230319983 230320053 -20367801 - MSTB1 LTR MaLR 0 432 361 2235 128 3 3 chr2 230320053 230320365 -20367489 + AluSx SINE Alu 1 312 0 2798 110 11 40 chr2 230320365 230320739 -20367115 - MSTB1 LTR MaLR -71 361 1 283 270 0 40 chr2 230320739 230320759 -20367095 - MIR SINE MIR -154 54 35 1477 158 4 0 chr2 230320985 230321225 -20366629 - L1MB7 LINE L1 -317 5867 5627 1023 120 0 0 chr2 230321225 230321367 -20366487 + AluJb SINE Alu 158 299 -13 2298 109 0 0 chr2 230321671 230321973 -20365881 + AluSx SINE Alu 1 302 -10 252 0 0 0 chr2 230322002 230322030 -20365824 + (T)n Simple_repeat Simple_repeat 1 28 0 760 180 47 12 chr2 230322091 230322263 -20365591 + L1MD3 LINE L1 7808 7985 -10 23 0 0 0 chr2 230322409 230322432 -20365422 + AT_rich Low_complexity Low_complexity 1 23 0 2037 103 3 31 chr2 230322549 230322840 -20365014 - AluSg SINE Alu -11 299 17 1993 134 3 0 chr2 230323012 230323295 -20364559 - AluSx SINE Alu -28 284 1 446 185 25 0 chr2 230323309 230323390 -20364464 - AluJo/FRAM SINE Alu -28 284 202 1959 149 17 0 chr2 230323390 230323686 -20364168 + AluJb SINE Alu 1 301 -11 739 133 9 3 chr2 230324507 230324635 -20363219 + L1PA14 LINE L1 5979 6104 -59 2182 107 43 0 chr2 230324651 230324951 -20362903 + AluSq SINE Alu 1 313 0 549 246 9 118 chr2 230324953 230325173 -20362681 + MER102b DNA MER1_type 135 330 -11 1044 155 18 59 chr2 230325283 230325326 -20362528 - L1MB4 LINE L1 -6 6174 6131 2270 101 0 19 chr2 230325326 230325633 -20362221 - AluSc SINE Alu -8 301 1 1044 155 18 59 chr2 230325633 230325808 -20362046 - L1MB4 LINE L1 -49 6131 5965 614 181 101 29 chr2 230325808 230325946 -20361908 - MER110 LTR ERV1 -343 148 1 186 71 0 0 chr2 230326295 230326323 -20361531 + (CA)n Simple_repeat Simple_repeat 1 28 0 1134 165 52 19 chr2 230327067 230327279 -20360575 - MER20 DNA MER1_type 0 219 1 1040 85 0 0 chr2 230327751 230327880 -20359974 + AluSg SINE Alu 1 129 -181 265 128 0 0 chr2 230327881 230327920 -20359934 + MLT2A1 LTR ERVL 398 436 -8 559 169 24 32 chr2 230328285 230328297 -20359557 - L1MC1 LINE L1 -1 6332 6321 1850 179 0 3 chr2 230328297 230328598 -20359256 - AluJo SINE Alu -12 300 1 559 169 24 32 chr2 230328598 230328709 -20359145 - L1MC1 LINE L1 -12 6321 6210 3604 163 28 4 chr2 230328886 230329632 -20358222 - L1MA9 LINE L1 -22 6290 5431 442 162 0 0 chr2 230329632 230329706 -20358148 + Alu SINE Alu 236 309 -3 1791 81 0 5 chr2 230329724 230329946 -20357908 + AluY SINE Alu 1 221 -90 2814 215 28 56 chr2 230330049 230330849 -20357005 - L1MA9 LINE L1 -788 5358 4582 26 0 0 0 chr2 230330867 230330893 -20356961 + AT_rich Low_complexity Low_complexity 1 26 0 1641 188 0 14 chr2 230330895 230331183 -20356671 - AluJo SINE Alu -18 294 11 2417 102 0 0 chr2 230331637 230331950 -20355904 - AluSq SINE Alu 0 313 1 2582 148 14 14 chr2 230332039 230332473 -20355381 - MER57B LTR ERV1 0 434 1 190 267 15 111 chr2 230332568 230332703 -20355151 - MIR SINE MIR -112 150 29 2118 174 8 3 chr2 230332717 230333074 -20354780 + MLT1A1 LTR MaLR 7 365 0 1261 212 32 10 chr2 230333270 230333581 -20354273 + MER33 DNA MER1_type 6 323 -1 554 164 212 20 chr2 230334408 230334554 -20353300 + MER5B DNA MER1_type 5 178 0 304 308 48 27 chr2 230334554 230334700 -20353154 - MIR3 SINE MIR -48 160 12 2189 115 0 7 chr2 230334715 230335010 -20352844 - AluSq SINE Alu -20 293 1 189 297 16 0 chr2 230335277 230335341 -20352513 + L2 LINE L2 3208 3272 0 390 231 156 31 chr2 230335971 230336131 -20351723 + MER5A DNA MER1_type 4 183 -6 807 181 38 118 chr2 230336167 230336404 -20351450 + MER20 DNA MER1_type 2 219 0 1768 162 4 0 chr2 230336456 230336728 -20351126 + AluJo SINE Alu 10 282 -30 1219 130 0 11 chr2 230336925 230337102 -20350752 - FRAM SINE Alu -2 174 1 253 188 62 0 chr2 230337475 230337539 -20350315 - MER5B DNA MER1_type -63 115 48 237 252 84 9 chr2 230337759 230337866 -20349988 - L1ME4a LINE L1 -34 6087 5973 204 298 61 112 chr2 230337894 230338270 -20349584 + L2 LINE L2 2909 3265 -7 2455 71 0 3 chr2 230338392 230338688 -20349166 - AluY SINE Alu -16 295 1 1534 162 40 50 chr2 230338744 230339041 -20348813 + AluJo SINE Alu 3 296 -16 2083 153 0 0 chr2 230339225 230339525 -20348329 + AluSx SINE Alu 1 300 -12 2586 88 59 0 chr2 230339736 230340090 -20347764 - THE1C LTR MaLR 0 375 1 705 189 53 0 chr2 230340267 230340399 -20347455 + AluJo SINE Alu 2 140 -172 2166 67 45 0 chr2 230340404 230340738 -20347116 + AluY SINE Alu 1 346 0 1878 181 0 3 chr2 230340827 230341136 -20346718 - AluJb SINE Alu -4 308 1 21 36 0 0 chr2 230341147 230341175 -20346679 + AT_rich Low_complexity Low_complexity 1 28 0 428 246 82 35 chr2 230341681 230341852 -20346002 + MIR SINE MIR 83 261 -1 728 183 8 0 chr2 230342296 230342416 -20345438 + FLAM_C SINE Alu 5 125 -18 1177 170 5 31 chr2 230342446 230342691 -20345163 + AluJb SINE Alu 96 312 0 1483 261 56 29 chr2 230342691 230343140 -20344714 - MLT1J LTR MaLR -48 463 3 829 130 7 43 chr2 230343355 230343493 -20344361 + FLAM_C SINE Alu 1 133 0 706 173 0 58 chr2 230343740 230343879 -20343975 - FRAM SINE Alu -8 168 38 378 252 39 0 chr2 230343933 230344060 -20343794 - L1ME1 LINE L1 -10 6156 6025 889 136 0 0 chr2 230544063 230544188 -20143666 - AluJb SINE Alu -183 129 5 2074 95 3 18 chr2 230544865 230545190 -20142664 - AluSx SINE Alu 0 323 3 1451 150 4 8 chr2 230545267 230545501 -20142353 + AluJb SINE Alu 39 271 -41 315 319 53 18 chr2 230546063 230546232 -20141622 + HAL1 LINE L1 843 1017 -1490 4363 74 19 45 chr2 230546455 230547926 -20139928 - SVA Other Other -1285 1140 1 2031 154 0 0 chr2 230547940 230548239 -20139615 - AluSx SINE Alu -13 299 1 2157 83 4 0 chr2 230548514 230548778 -20139076 - AluY SINE Alu -46 265 1 2208 118 0 0 chr2 230548954 230549242 -20138612 + AluSg SINE Alu 1 288 -22 549 0 0 0 chr2 230549246 230549307 -20138547 + (TA)n Simple_repeat Simple_repeat 2 62 0 359 294 224 14 chr2 230550275 230550489 -20137365 + L2 LINE L2 3014 3272 0 5520 100 78 1 chr2 230551214 230552001 -20135853 - THE1B-int LTR MaLR -733 847 1 2613 108 11 3 chr2 230552001 230552362 -20135492 - THE1B LTR MaLR 0 364 1 2316 90 0 32 chr2 230553264 230553574 -20134280 + AluY SINE Alu 1 300 -11 1614 156 4 0 chr2 230553581 230553824 -20134030 + AluSq SINE Alu 3 246 -67 1567 169 43 114 chr2 230554089 230554327 -20133527 - MLT1B LTR MaLR 0 390 137 2483 74 0 0 chr2 230554327 230554624 -20133230 - AluY SINE Alu -14 297 1 1567 169 43 114 chr2 230554624 230554725 -20133129 - MLT1B LTR MaLR -253 137 84 2071 160 25 0 chr2 230554725 230555082 -20132772 + MER47A DNA MER2_type 1 366 0 1567 169 43 114 chr2 230555082 230555161 -20132693 - MLT1B LTR MaLR -306 84 1 214 337 35 0 chr2 230555208 230555294 -20132560 - MIR SINE MIR -29 233 145 1326 117 16 0 chr2 230556175 230556363 -20131491 - AluSg/x SINE Alu -1 311 121 279 311 66 16 chr2 230557415 230557537 -20130317 - L2 LINE L2 -1 3271 3144 189 0 0 0 chr2 230558167 230558188 -20129666 + (T)n Simple_repeat Simple_repeat 1 21 0 1565 148 57 124 chr2 230558261 230558633 -20129221 + Tigger3(Golem) DNA MER2_type 2 3029 0 2165 143 0 0 chr2 230558771 230559071 -20128783 - AluSx SINE Alu -12 300 1 1741 119 81 8 chr2 230559263 230559523 -20128331 - AluSg SINE Alu -31 279 1 376 324 122 5 chr2 230559682 230559895 -20127959 + MIR SINE MIR 23 260 -2 2070 142 7 0 chr2 230560188 230560484 -20127370 - AluSx SINE Alu -14 298 1 319 204 0 0 chr2 230560915 230560969 -20126885 + MLT1K LTR MaLR 172 225 -363 994 166 73 49 chr2 230560992 230561197 -20126657 + MER21A LTR ERV1 13 222 -709 646 140 0 0 chr2 230561197 230561355 -20126499 + AluY SINE Alu 192 349 0 436 132 0 0 chr2 230561358 230561426 -20126428 + MER39 LTR ERV1 340 407 -300 * 2615 179 27 21 chr2 230561423 230561898 -20125956 + MER21A LTR ERV1 360 837 -94 448 281 46 13 chr2 230562105 230562258 -20125596 + MLT1K LTR MaLR 431 588 0 2206 183 61 2 chr2 230564313 230564739 -20123115 + LTR47A LTR ERVL 2 452 0 2488 45 0 7 chr2 230564853 230565142 -20122712 - AluY SINE Alu -24 287 1 1247 140 14 42 chr2 230565469 230565683 -20122171 + MER2 DNA MER2_type 3 210 -135 29 0 0 25 chr2 230565726 230565753 -20122101 + AT_rich Low_complexity Low_complexity 1 28 -11 2241 104 0 10 chr2 230565753 230566050 -20121804 - AluSx SINE Alu -18 294 1 29 0 0 25 chr2 230566050 230566062 -20121792 + AT_rich Low_complexity Low_complexity 28 39 0 420 220 76 8 chr2 230566611 230566729 -20121125 + MER112 DNA MER1_type 1 126 -134 2088 127 0 7 chr2 230567059 230567350 -20120504 + AluSx SINE Alu 1 289 -23 1700 170 34 77 chr2 230567382 230567770 -20120084 + MLT1A2 LTR MaLR 4 374 0 503 209 52 58 chr2 230568507 230568679 -20119175 + MIR SINE MIR 58 228 -34 197 362 86 9 chr2 230568898 230569014 -20118840 + L2 LINE L2 3189 3313 0 333 234 111 47 chr2 230569304 230569475 -20118379 - MIR SINE MIR -2 260 79 2045 139 7 0 chr2 230569530 230570005 -20117849 - AluJb SINE Alu 0 481 5 265 304 11 0 chr2 230570067 230570159 -20117695 - MIR3 SINE MIR -7 201 109 3052 143 54 2 chr2 230570910 230571447 -20116407 - L1MC1 LINE L1 -9 6324 5760 352 303 9 0 chr2 230571737 230571846 -20116008 + MIR3 SINE MIR 93 202 -6 369 214 24 0 chr2 230572577 230572661 -20115193 - L1MC1 LINE L1 -4 6329 6244 274 159 29 58 chr2 230572661 230572730 -20115124 + MLT1K LTR MaLR 522 588 0 2228 118 0 0 chr2 230572858 230573155 -20114699 + AluSx SINE Alu 1 297 -15 1985 141 7 3 chr2 230573264 230573563 -20114291 - AluSx SINE Alu -12 300 1 2062 133 13 10 chr2 230573882 230574190 -20113664 + AluJb SINE Alu 1 309 -3 204 231 0 0 chr2 230575320 230575372 -20112482 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 188 290 57 48 chr2 230575386 230575510 -20112344 - MIR SINE MIR -72 190 66 392 329 15 7 chr2 230575658 230575795 -20112059 - MER82 DNA MER2_type 0 653 516 1873 253 71 47 chr2 230577016 230577763 -20110091 + L1MB8 LINE L1 5412 6176 -2 2048 87 0 84 chr2 230577771 230578102 -20109752 + AluSx SINE Alu 1 305 0 287 263 91 45 chr2 230578109 230578307 -20109547 + L1MC4a LINE L1 5817 6023 -1785 2325 119 0 0 chr2 230579874 230580185 -20107669 - AluSx SINE Alu -1 311 1 272 186 186 14 chr2 230580409 230580479 -20107375 + MLT1B LTR MaLR 1 82 -308 1412 81 0 0 chr2 230580479 230580651 -20107203 + AluSg/x SINE Alu 137 308 -4 186 43 0 0 chr2 230581578 230581601 -20106253 + (TC)n Simple_repeat Simple_repeat 2 24 0 1326 149 15 5 chr2 230581601 230581796 -20106058 - AluJb SINE Alu -30 282 86 1205 154 0 15 chr2 230583251 230583446 -20104408 + AluJo SINE Alu 99 290 -22 343 217 14 0 chr2 230583797 230583866 -20103988 - MER81 DNA DNA 0 114 45 1807 225 66 7 chr2 230583903 230584330 -20103524 - MER41B LTR ERV1 -36 599 148 228 211 0 0 chr2 230584367 230584405 -20103449 - MER81 DNA DNA -76 38 1 1423 180 120 0 chr2 230584484 230584751 -20103103 - AluSg SINE Alu -11 299 1 2326 109 0 0 chr2 230585266 230585568 -20102286 + AluSx SINE Alu 1 302 -10 234 0 0 0 chr2 230585568 230585594 -20102260 + (TA)n Simple_repeat Simple_repeat 2 27 0 2168 101 7 29 chr2 230585756 230586064 -20101790 + AluSx SINE Alu 1 301 -11 255 298 0 0 chr2 230586908 230586965 -20100889 - MLT1L LTR MaLR -211 404 348 1553 149 3 110 chr2 230586983 230587318 -20100536 - AluJb SINE Alu -3 299 1 306 194 32 0 chr2 230587347 230587409 -20100445 - MLT1L LTR MaLR -347 268 205 270 222 12 62 chr2 230587380 230587461 -20100393 - MLT1J LTR MaLR -341 170 94 * 1280 237 80 0 chr2 230587467 230587779 -20100075 - MER58B DNA MER1_type -1 340 4 1608 199 0 4 chr2 230588236 230588517 -20099337 - AluJo SINE Alu -30 282 3 324 189 55 24 chr2 230588653 230588780 -20099074 + (TA)n Simple_repeat Simple_repeat 1 131 0 807 289 122 76 chr2 230588808 230588884 -20098970 - MLT1K LTR MaLR -63 525 454 2237 119 3 3 chr2 230588884 230589195 -20098659 + AluSx SINE Alu 1 311 -1 807 289 122 76 chr2 230589195 230589546 -20098308 - MLT1K LTR MaLR -134 454 75 2600 64 0 0 chr2 230589546 230589857 -20097997 + AluY SINE Alu 1 311 0 191 388 21 16 chr2 230590049 230590237 -20097617 - MER5A DNA MER1_type 0 189 1 869 288 85 29 chr2 230590258 230590636 -20097218 - MLT1J LTR MaLR -16 495 97 351 0 0 0 chr2 230590676 230590715 -20097139 + (CA)n Simple_repeat Simple_repeat 2 40 0 1659 266 122 46 chr2 230590771 230591755 -20096099 + HAL1 LINE L1 2 1060 -1447 560 276 139 9 chr2 230591722 230592045 -20095809 + HAL1 LINE L1 2140 2504 -3 * 442 204 111 58 chr2 230592588 230592796 -20095058 + MLT1L LTR MaLR 110 392 -223 264 315 168 21 chr2 230593382 230593525 -20094329 - MIR SINE MIR -70 192 29 406 267 64 27 chr2 230594220 230594407 -20093447 + MIR SINE MIR 69 262 0 1709 134 84 37 chr2 230594520 230594818 -20093036 + AluSx SINE Alu 1 312 0 1093 158 57 44 chr2 230594832 230595060 -20092794 + AluJo SINE Alu 82 312 0 243 366 0 12 chr2 230595626 230595708 -20092146 + L2 LINE L2 3106 3186 -86 499 293 12 48 chr2 230596000 230596167 -20091687 + MIR3 SINE MIR 30 190 -18 535 272 28 42 chr2 230596597 230596814 -20091040 + L2 LINE L2 3100 3313 0 4889 159 54 15 chr2 230597118 230598098 -20089756 - L1MB7 LINE L1 -16 6168 5134 4330 143 36 15 chr2 230598328 230599001 -20088853 - LTR8 LTR ERV1 -4 687 1 319 276 48 55 chr2 230599094 230599208 -20088646 - MIR3 SINE MIR -41 167 53 2962 110 11 40 chr2 230599208 230599278 -20088576 - MSTB1 LTR MaLR 0 432 361 2192 131 3 3 chr2 230599278 230599590 -20088264 + AluSx SINE Alu 1 312 0 2962 110 11 40 chr2 230599590 230599964 -20087890 - MSTB1 LTR MaLR -71 361 1 319 276 48 55 chr2 230599964 230599994 -20087860 - MIR3 SINE MIR -155 53 24 1492 158 4 0 chr2 230600210 230600450 -20087404 - L1MB7 LINE L1 -317 5867 5627 1008 120 0 0 chr2 230600450 230600592 -20087262 + AluJb SINE Alu 158 299 -13 2281 109 0 0 chr2 230600896 230601198 -20086656 + AluSx SINE Alu 1 302 -10 261 0 0 0 chr2 230601226 230601255 -20086599 + (T)n Simple_repeat Simple_repeat 1 29 0 772 180 47 12 chr2 230601316 230601488 -20086366 + L1MD3 LINE L1 7808 7985 -10 23 0 0 0 chr2 230601634 230601657 -20086197 + AT_rich Low_complexity Low_complexity 1 23 0 2023 103 3 31 chr2 230601774 230602065 -20085789 - AluSg SINE Alu -11 299 17 1970 134 3 0 chr2 230602237 230602520 -20085334 - AluSx SINE Alu -28 284 1 469 198 25 0 chr2 230602534 230602615 -20085239 - AluJo/FRAM SINE Alu -28 284 202 1981 142 17 0 chr2 230602615 230602911 -20084943 + AluJb SINE Alu 1 301 -11 741 133 9 3 chr2 230603731 230603859 -20083995 + L1PA14 LINE L1 5979 6104 -59 2188 90 47 3 chr2 230603875 230604175 -20083679 + AluSq SINE Alu 1 313 0 550 246 9 118 chr2 230604177 230604397 -20083457 + MER102a DNA MER1_type 124 319 -11 1120 151 18 59 chr2 230604507 230604550 -20083304 - L1MB4 LINE L1 -6 6174 6131 2296 94 0 19 chr2 230604550 230604857 -20082997 - AluSc SINE Alu -8 301 1 1120 151 18 59 chr2 230604857 230605032 -20082822 - L1MB4 LINE L1 -49 6131 5965 619 181 101 29 chr2 230605032 230605170 -20082684 - MER110 LTR ERV1 -343 148 1 186 71 0 0 chr2 230605519 230605547 -20082307 + (CA)n Simple_repeat Simple_repeat 1 28 0 1207 165 52 19 chr2 230606291 230606503 -20081351 - MER20 DNA MER1_type 0 219 1 1030 85 0 0 chr2 230606975 230607104 -20080750 + AluSg SINE Alu 1 129 -181 267 128 0 0 chr2 230607105 230607144 -20080710 + MLT2A1 LTR ERVL 398 436 -8 603 154 32 32 chr2 230607509 230607521 -20080333 - L1MC1 LINE L1 -1 6332 6321 1840 179 0 3 chr2 230607521 230607822 -20080032 - AluJo SINE Alu -12 300 1 603 154 32 32 chr2 230607822 230607932 -20079922 - L1MC1 LINE L1 -11 6322 6210 460 219 8 0 chr2 230608108 230608231 -20079623 - L1MA7 LINE L1 -8 6283 6160 4367 170 30 31 chr2 230608231 230609720 -20078134 - L1MA9 LINE L1 -245 6067 4582 26 0 0 0 chr2 230609738 230609764 -20078090 + AT_rich Low_complexity Low_complexity 1 26 0 1633 188 0 14 chr2 230609766 230610054 -20077800 - AluJo SINE Alu -18 294 11 187 229 0 0 chr2 230610399 230610434 -20077420 - L2 LINE L2 -19 3253 3219 2398 102 0 0 chr2 230610508 230610821 -20077033 - AluSq SINE Alu 0 313 1 2716 148 14 14 chr2 230610910 230611344 -20076510 - MER57B LTR ERV1 0 434 1 228 250 52 122 chr2 230611415 230611587 -20076267 - MIR SINE MIR -82 180 21 2109 174 8 3 chr2 230611588 230611945 -20075909 + MLT1A1 LTR MaLR 7 365 0 1280 212 32 10 chr2 230612141 230612452 -20075402 + MER33 DNA MER1_type 6 323 -1 607 161 215 20 chr2 230613276 230613425 -20074429 + MER5B DNA MER1_type 1 178 0 305 103 0 0 chr2 230613590 230613649 -20074205 + Alu SINE Alu 247 305 0 244 196 125 0 chr2 230613649 230613700 -20074154 + LTR16C LTR ERVL 434 491 0 1948 144 41 0 chr2 230614177 230614468 -20073386 - AluSx SINE Alu -9 303 1 423 0 0 0 chr2 230614578 230614625 -20073229 + (CA)n Simple_repeat Simple_repeat 2 48 0 805 219 11 38 chr2 230614632 230614815 -20073039 - Tigger3(Golem) DNA MER2_type 0 3037 2860 1002 230 71 44 chr2 230614839 230615135 -20072719 - LTR16A LTR ERVL -132 318 15 2428 94 3 0 chr2 230615289 230615597 -20072257 - AluSp SINE Alu -4 309 1 2177 101 10 7 chr2 230616109 230616407 -20071447 + AluSx SINE Alu 1 299 -13 1331 194 41 74 chr2 230616425 230616816 -20071038 + MLT1B LTR MaLR 6 383 -7 180 326 43 22 chr2 230616947 230617039 -20070815 + MIR SINE MIR 119 212 -50 3298 176 45 44 chr2 230617646 230617881 -20069973 + L1MB4 LINE L1 5429 5662 -518 1999 123 3 33 chr2 230617881 230618181 -20069673 + AluJb SINE Alu 5 295 -17 3298 176 45 44 chr2 230618181 230618694 -20069160 + L1MB4 LINE L1 5662 6178 -2 285 279 156 0 chr2 230618770 230618892 -20068962 - MIR SINE MIR -65 197 57 1820 155 10 36 chr2 230619389 230619698 -20068156 - AluSx SINE Alu -11 301 1 1215 209 92 33 chr2 230619747 230619886 -20067968 + AluJo SINE Alu 1 130 -182 1236 194 64 35 chr2 230619886 230620169 -20067685 + AluJo SINE Alu 1 291 -21 1215 209 92 33 chr2 230620169 230620302 -20067552 + AluJo SINE Alu 130 289 -23 21 0 0 0 chr2 230620302 230620323 -20067531 + AT_rich Low_complexity Low_complexity 1 21 0 2094 138 6 10 chr2 230620329 230620641 -20067213 + AluSx SINE Alu 1 311 -1 450 325 133 60 chr2 230620682 230621689 -20066165 + L2 LINE L2 2031 3105 -167 2343 74 0 3 chr2 230621848 230622164 -20065690 + AluSp SINE Alu 1 315 0 1318 293 41 70 chr2 230622381 230622907 -20064947 + MLT1K LTR MaLR 2 510 -78 2073 120 3 3 chr2 230622907 230623198 -20064656 - AluSx SINE Alu -19 293 3 1318 293 41 70 chr2 230623198 230623275 -20064579 + MLT1K LTR MaLR 510 588 0 784 105 26 20 chr2 230624054 230624207 -20063647 + CT-rich Low_complexity Low_complexity 1 154 0 1133 89 0 0 chr2 230624207 230624353 -20063501 - L1PA8 LINE L1 -1 6171 6026 201 74 0 0 chr2 230624815 230624842 -20063012 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2349 107 7 0 chr2 230624980 230625359 -20062495 - AluSx SINE Alu 0 381 1 342 0 0 0 chr2 230625532 230625570 -20062284 + (TA)n Simple_repeat Simple_repeat 2 39 0 368 315 109 18 chr2 230625634 230625799 -20062055 + MIR SINE MIR 26 205 -57 423 282 46 73 chr2 230626537 230626796 -20061058 - MLT1K LTR MaLR -325 263 12 2068 100 0 0 chr2 230627321 230627591 -20060263 - AluSx SINE Alu 0 312 43 297 0 0 0 chr2 230627623 230627656 -20060198 + (TA)n Simple_repeat Simple_repeat 2 34 0 256 103 35 0 chr2 230627657 230627715 -20060139 + T-rich Low_complexity Low_complexity 4 63 0 417 210 142 114 chr2 230628001 230628177 -20059677 - MER5A DNA MER1_type 0 189 9 2352 101 0 0 chr2 230628635 230628931 -20058923 - AluSx SINE Alu -16 296 1 553 261 9 9 chr2 230629053 230629168 -20058686 - L2 LINE L2 -8 3264 3150 1287 182 50 53 chr2 230629175 230629415 -20058439 + MER33 DNA MER1_type 6 246 -2339 789 144 64 8 chr2 230629415 230629540 -20058314 - FLAM_C SINE Alu -1 132 1 1287 182 50 53 chr2 230629540 230629617 -20058237 + MER33 DNA MER1_type 246 322 -2 566 220 143 42 chr2 230629636 230629804 -20058050 - MER5A DNA MER1_type -1 188 4 1917 150 0 11 chr2 230629856 230630163 -20057691 + AluSx SINE Alu 1 304 0 206 338 35 42 chr2 230630404 230630546 -20057308 - L2 LINE L2 -8 3305 3165 2252 114 0 13 chr2 230630771 230631079 -20056775 + AluSc SINE Alu 1 304 -5 2253 94 0 32 chr2 230631271 230631407 -20056447 - AluSq SINE Alu -14 299 160 1526 139 89 115 chr2 230631407 230631867 -20055987 - LTR7 LTR ERV1 -2 448 1 2253 94 0 32 chr2 230631867 230632039 -20055815 - AluSq SINE Alu -153 160 1 419 265 34 20 chr2 230632047 230632194 -20055660 + MLT1K LTR MaLR 438 586 -2 219 307 68 81 chr2 230632580 230632718 -20055136 + L2 LINE L2 3019 3157 -156 2298 63 3 0 chr2 230632718 230633003 -20054851 + AluY SINE Alu 2 287 -24 219 307 68 81 chr2 230633003 230633160 -20054694 + L2 LINE L2 3157 3310 -3 1152 247 62 87 chr2 230633544 230634062 -20053792 + MLT1J LTR MaLR 4 508 -3 21 57 0 0 chr2 230634074 230634109 -20053745 + AT_rich Low_complexity Low_complexity 1 35 0 4571 172 7 4 chr2 230634645 230635768 -20052086 + L1PA16 LINE L1 4484 5609 -557 1217 136 71 0 chr2 230635768 230635961 -20051893 + L1PA16 LINE L1 5951 6162 -4 190 259 129 0 chr2 230636000 230636085 -20051769 + L3b LINE CR1 1251 1346 -237 1189 56 7 0 chr2 230636374 230636516 -20051338 + AluSp SINE Alu 1 143 -170 655 338 38 25 chr2 230636522 230636915 -20050939 + ERVL LTR ERVL 4377 4774 -990 269 238 88 12 chr2 230636916 230636996 -20050858 + MLT1L LTR MaLR 113 198 -417 525 232 151 27 chr2 230637056 230637241 -20050613 + MLT1L LTR MaLR 293 500 -115 1763 177 0 0 chr2 230637241 230637552 -20050302 + AluSx SINE Alu 1 311 0 286 224 92 0 chr2 230637585 230637661 -20050193 + MLT1L LTR MaLR 489 571 -44 1109 270 44 31 chr2 230637799 230638155 -20049699 + MLT1L LTR MaLR 72 422 -193 1883 149 0 39 chr2 230638155 230638336 -20049518 - AluJo SINE Alu -14 298 111 441 0 0 0 chr2 230638336 230638385 -20049469 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 2253 82 0 4 chr2 230638385 230638666 -20049188 - AluSc SINE Alu -29 280 1 1883 149 0 39 chr2 230638666 230638791 -20049063 - AluJo SINE Alu -199 113 3 1109 270 44 31 chr2 230638791 230638868 -20048986 + MLT1L LTR MaLR 422 615 0 27 0 0 0 chr2 230639302 230639329 -20048525 + AT_rich Low_complexity Low_complexity 1 27 0 273 123 281 0 chr2 230639348 230639404 -20048450 + Tigger1 DNA MER2_type 1 72 -2346 501 87 0 14 chr2 230639404 230639473 -20048381 - THE1B LTR MaLR 0 364 297 1822 106 4 0 chr2 230639475 230639711 -20048143 + AluSg SINE Alu 1 237 -73 13413 125 22 13 chr2 230639714 230641306 -20046548 + Tigger1 DNA MER2_type 329 1906 -512 2277 97 10 0 chr2 230641306 230641604 -20046250 - AluSg SINE Alu -8 302 2 13413 125 22 13 chr2 230641604 230641962 -20045892 + Tigger1 DNA MER2_type 1906 2301 -117 2418 71 7 0 chr2 230641962 230642257 -20045597 - AluSq SINE Alu -15 298 2 13413 125 22 13 chr2 230642257 230642376 -20045478 + Tigger1 DNA MER2_type 2301 2417 -1 22 0 0 0 chr2 230643506 230643528 -20044326 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 230643746 230643767 -20044087 + GC_rich Low_complexity Low_complexity 1 21 0 586 284 228 22 chr2 230644502 230645094 -20042760 - L2 LINE L2 -799 2515 1802 310 316 82 18 chr2 230645119 230645290 -20042564 - L2 LINE L2 -1634 1680 1499 257 344 184 0 chr2 230645856 230645981 -20041873 - L2 LINE L2 0 3272 3125 189 352 22 33 chr2 230646104 230646195 -20041659 - L2 LINE L2 -214 3058 2969 279 0 0 0 chr2 230646226 230646257 -20041597 + (TG)n Simple_repeat Simple_repeat 2 32 0 335 190 133 76 chr2 230646506 230646583 -20041271 - MIR SINE MIR -1 261 190 2310 80 0 3 chr2 230646583 230646871 -20040983 - AluY SINE Alu -18 293 7 335 190 133 76 chr2 230646871 230646951 -20040903 - MIR SINE MIR -72 190 95 26 50 0 0 chr2 230647374 230647414 -20040440 + GC_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 230647662 230647684 -20040170 + GC_rich Low_complexity Low_complexity 1 22 0 231 242 48 0 chr2 230648405 230648467 -20039387 - MIR SINE MIR -85 177 113 494 241 131 38 chr2 230648634 230648870 -20038984 - MIR SINE MIR -3 259 2 186 289 0 0 chr2 230649274 230649319 -20038535 + MIR SINE MIR 95 139 -69 242 177 0 113 chr2 230649588 230649650 -20038204 - L2 LINE L2 -37 3276 3222 2189 115 0 7 chr2 230650389 230650684 -20037170 - AluSq SINE Alu -20 293 1 189 297 16 0 chr2 230650951 230651015 -20036839 + L2 LINE L2 3208 3272 0 390 231 156 31 chr2 230651644 230651804 -20036050 + MER5A DNA MER1_type 4 183 -6 807 181 38 118 chr2 230651840 230652077 -20035777 + MER20 DNA MER1_type 2 219 0 1768 162 4 0 chr2 230652129 230652401 -20035453 + AluJo SINE Alu 10 282 -30 1219 130 0 11 chr2 230652598 230652775 -20035079 - FRAM SINE Alu -2 174 1 264 172 62 0 chr2 230653148 230653212 -20034642 - MER5B DNA MER1_type -63 115 48 237 252 84 9 chr2 230653432 230653539 -20034315 - L1ME4a LINE L1 -34 6087 5973 255 221 36 136 chr2 230653803 230653943 -20033911 + L2 LINE L2 3140 3265 -7 2455 71 0 3 chr2 230654065 230654361 -20033493 - AluY SINE Alu -16 295 1 1534 162 40 50 chr2 230654417 230654714 -20033140 + AluJo SINE Alu 3 296 -16 1953 160 3 3 chr2 230654898 230655198 -20032656 + AluSx SINE Alu 1 300 -12 2586 88 59 0 chr2 230655409 230655763 -20032091 - THE1C LTR MaLR 0 375 1 705 189 53 0 chr2 230655940 230656072 -20031782 + AluJo SINE Alu 2 140 -172 2166 67 45 0 chr2 230656077 230656411 -20031443 + AluY SINE Alu 1 346 0 1878 181 0 3 chr2 230656500 230656809 -20031045 - AluJb SINE Alu -4 308 1 21 36 0 0 chr2 230656820 230656848 -20031006 + AT_rich Low_complexity Low_complexity 1 28 0 428 246 82 35 chr2 230657354 230657525 -20030329 + MIR SINE MIR 83 261 -1 728 183 8 0 chr2 230657969 230658089 -20029765 + FLAM_C SINE Alu 5 125 -18 1177 170 5 31 chr2 230658119 230658364 -20029490 + AluJb SINE Alu 96 312 0 1483 261 56 29 chr2 230658364 230658813 -20029041 - MLT1J LTR MaLR -48 463 3 829 130 7 43 chr2 230659028 230659166 -20028688 + FLAM_C SINE Alu 1 133 0 706 173 0 58 chr2 230659413 230659552 -20028302 - FRAM SINE Alu -8 168 38 378 252 39 0 chr2 230659606 230659733 -20028121 - L1ME1 LINE L1 -10 6156 6025 2108 128 0 0 chr2 230659739 230660045 -20027809 + AluSg SINE Alu 1 306 -4 489 204 0 0 chr2 230660049 230660137 -20027717 + MER31-int LTR ERV1 649 736 -6801 414 172 81 0 chr2 230660294 230660381 -20027473 + MER31-int LTR ERV1 749 842 -6695 2143 125 0 10 chr2 230660579 230660890 -20026964 - AluSx SINE Alu -4 308 1 2281 105 7 0 chr2 230660901 230661196 -20026658 - AluSc SINE Alu -12 297 1 294 189 0 89 chr2 230661198 230661288 -20026566 + MER31-int LTR ERV1 908 989 -4134 395 256 0 0 chr2 230661290 230661376 -20026478 + MER34C LTR ERV1 158 243 -342 1903 143 3 23 chr2 230661525 230661832 -20026022 - AluSx SINE Alu -11 301 1 347 213 13 13 chr2 230662227 230662302 -20025552 + MER31-int LTR ERV1 1116 1190 -5141 2096 146 0 3 chr2 230662315 230662623 -20025231 + AluJb SINE Alu 5 311 -1 243 291 18 0 chr2 230662647 230662702 -20025152 + tRNA-Glu-GAG tRNA tRNA 20 75 0 1758 210 26 49 chr2 230662721 230663174 -20024680 + MER31-int LTR ERV1 2678 3120 -3211 700 254 65 55 chr2 230662891 230663288 -20024566 + LTR57-int LTR ERVL 774 1388 -3955 * 2380 103 0 0 chr2 230663288 230663590 -20024264 + AluSc SINE Alu 1 302 -7 700 254 65 55 chr2 230663590 230663716 -20024138 + LTR57-int LTR ERVL 1388 1511 -3832 446 264 16 47 chr2 230663725 230663918 -20023936 + MER31-int LTR ERV1 1679 1865 -3071 751 181 0 0 chr2 230664068 230664195 -20023659 + FLAM_C SINE Alu 2 128 -5 615 157 17 148 chr2 230664195 230664314 -20023540 + MER31-int LTR ERV1 2713 2846 -2186 2239 96 0 3 chr2 230664314 230664605 -20023249 + AluSx SINE Alu 1 290 -22 615 157 17 148 chr2 230664605 230664780 -20023074 + MER31-int LTR ERV1 2846 3082 -1950 1822 159 30 3 chr2 230664780 230665075 -20022779 + AluSx SINE Alu 1 303 -9 3000 134 8 77 chr2 230665113 230665753 -20022101 + MER31-int LTR ERV1 3712 4307 -2024 827 75 9 0 chr2 230665753 230665859 -20021995 - THE1B LTR MaLR 0 364 258 2694 92 46 27 chr2 230665873 230666286 -20021568 + LTR43 LTR ERV1 175 595 -7 2350 95 3 49 chr2 230666372 230666739 -20021115 - L1PB2 LINE L1 -2 6149 5800 281 184 0 13 chr2 230666750 230666826 -20021028 + (TA)n Simple_repeat Simple_repeat 2 76 0 3646 84 4 12 chr2 230666826 230666873 -20020981 - L1PB2 LINE L1 -360 5791 5745 2213 130 74 0 chr2 230666873 230667212 -20020642 - THE1B LTR MaLR 0 364 1 3646 84 4 12 chr2 230667212 230667678 -20020176 - L1PB2 LINE L1 -406 5745 5282 403 119 17 0 chr2 230667793 230667852 -20020002 - FLAM SINE Alu -36 107 48 2189 119 3 3 chr2 230667944 230668246 -20019608 - AluSx SINE Alu -10 302 1 531 199 0 0 chr2 230668308 230668635 -20019219 + (TG)n Simple_repeat Simple_repeat 1 327 0 249 336 73 7 chr2 230668798 230668935 -20018919 - L2 LINE L2 0 3272 3127 2008 163 50 26 chr2 230669194 230669575 -20018279 + MLT1B LTR MaLR 1 390 0 300 206 0 16 chr2 230670584 230670647 -20017207 - AluYb8 SINE Alu -6 302 241 670 128 0 0 chr2 230670661 230670755 -20017099 - AluS SINE Alu -217 95 2 314 283 99 7 chr2 230670793 230670945 -20016909 + L1ME4a LINE L1 5956 6121 0 32 0 0 0 chr2 230670945 230670977 -20016877 + AT_rich Low_complexity Low_complexity 1 32 0 2246 103 0 3 chr2 230671047 230671347 -20016507 + AluSx SINE Alu 1 299 -13 294 417 0 0 chr2 230671629 230671737 -20016117 + L2 LINE L2 3123 3230 -42 462 259 43 0 chr2 230671741 230671871 -20015983 + LTR33 LTR ERVL 2 137 -384 227 258 15 15 chr2 230671871 230671937 -20015917 - MER69 DNA AcHobo 0 2526 2461 758 178 0 23 chr2 230671948 230672077 -20015777 + FLAM_C SINE Alu 2 127 -16 946 199 249 9 chr2 230672078 230672419 -20015435 - MER69 DNA AcHobo -54 2472 2050 270 81 0 0 chr2 230672531 230672568 -20015286 + (CA)n Simple_repeat Simple_repeat 1 37 0 1152 252 85 39 chr2 230672608 230672853 -20015001 - MER69 DNA AcHobo -819 407 136 1871 167 0 34 chr2 230672853 230673177 -20014677 + AluSq SINE Alu 1 313 0 1152 252 85 39 chr2 230673177 230673320 -20014534 - MER69 DNA AcHobo -1090 136 1 889 291 129 6 chr2 230673320 230673671 -20014183 + LTR33 LTR ERVL 125 519 -2 2139 128 0 0 chr2 230674251 230674541 -20013313 + AluSx SINE Alu 5 294 -18 1811 169 20 0 chr2 230674570 230674866 -20012988 + AluJb SINE Alu 1 302 -10 431 0 20 0 chr2 230675768 230675819 -20012035 + MADE1 DNA Mariner 2 53 -27 646 288 82 12 chr2 230675998 230676255 -20011599 + MER110 LTR ERV1 166 440 -51 1834 195 54 48 chr2 230676721 230677182 -20010672 + MLT1C LTR MaLR 1 464 -3 1843 166 37 35 chr2 230677321 230677695 -20010159 - THE1C LTR MaLR 0 375 1 1978 139 20 7 chr2 230678319 230678620 -20009234 + AluSx SINE Alu 1 305 -7 1042 314 177 12 chr2 230679156 230680004 -20007850 + L3 LINE CR1 434 1421 -156 375 256 124 85 chr2 230680259 230680480 -20007374 + MLT1J LTR MaLR 237 471 -40 2183 143 0 0 chr2 230680480 230680781 -20007073 + AluSx SINE Alu 1 301 -11 375 256 124 85 chr2 230680781 230680817 -20007037 + MLT1J LTR MaLR 471 504 -7 725 160 23 183 chr2 230682099 230682332 -20005522 - MER112 DNA MER1_type -1 255 79 2185 117 3 0 chr2 230682332 230682623 -20005231 - AluSx SINE Alu -20 292 1 725 160 23 183 chr2 230682623 230682689 -20005165 - MER112 DNA MER1_type -177 79 4 3944 152 31 31 chr2 230683053 230683769 -20004085 + L1MB7 LINE L1 5441 6156 -28 397 227 11 0 chr2 230683824 230683912 -20003942 + L1ME1 LINE L1 6024 6112 -54 2475 73 0 0 chr2 230684288 230684589 -20003265 - AluY SINE Alu -10 301 1 1650 136 3 91 chr2 230684983 230685314 -20002540 - AluJo SINE Alu 0 312 11 373 332 88 22 chr2 230685341 230685567 -20002287 - MIR SINE MIR 0 262 22 438 69 0 0 chr2 230686092 230686150 -20001704 + (TG)n Simple_repeat Simple_repeat 1 58 0 1989 139 30 9 chr2 230686636 230686966 -20000888 - MER1B DNA MER1_type 0 337 1 1702 177 32 85 chr2 230687125 230687194 -20000660 + MLT1B LTR MaLR 1 72 -318 2322 113 0 0 chr2 230687194 230687504 -20000350 + AluSx SINE Alu 1 310 -2 1702 177 32 85 chr2 230687504 230687846 -20000008 + MLT1B LTR MaLR 72 390 0 634 38 13 0 chr2 230689538 230689617 -19998237 - MADE1 DNA Mariner 0 80 1 2224 122 27 0 chr2 230689929 230690264 -19997590 - L1PA10 LINE L1 -57 6111 5768 184 167 21 21 chr2 230691037 230691085 -19996769 - MIR SINE MIR -134 128 81 1535 168 129 0 chr2 230691875 230692210 -19995644 - L1MD3 LINE L1 0 8042 7678 1389 234 42 49 chr2 230692252 230692354 -19995500 - L1MC4 LINE L1 -1214 6594 6493 189 74 0 0 chr2 230692354 230692381 -19995473 + (CA)n Simple_repeat Simple_repeat 1 27 0 1389 234 42 49 chr2 230692381 230692623 -19995231 - L1MC4 LINE L1 -1315 6493 6251 2199 93 34 0 chr2 230692623 230692914 -19994940 - AluSx SINE Alu -11 301 1 1389 234 42 49 chr2 230692914 230693162 -19994692 - L1MC4 LINE L1 -1557 6251 6181 189 107 0 0 chr2 230693162 230693190 -19994664 + (TCTA)n Simple_repeat Simple_repeat 3 30 0 1389 234 42 49 chr2 230693190 230693351 -19994503 - L1MC4 LINE L1 -1627 6181 6020 858 156 114 0 chr2 230693355 230693522 -19994332 - MLT2B2 LTR ERVL -1 514 329 972 286 65 64 chr2 230693553 230694048 -19993806 - L1M4 LINE L1 -1130 5016 4518 2684 90 8 13 chr2 230694048 230694437 -19993417 + L1MA1 LINE L1 5912 6298 -4 972 286 65 64 chr2 230694437 230694863 -19992991 - L1M4 LINE L1 -1628 4518 4094 436 254 154 62 chr2 230695007 230695247 -19992607 + MLT1J LTR MaLR 130 391 -120 3341 238 130 26 chr2 230695514 230697489 -19990365 + L1 LINE L1 800 2838 -3544 1106 199 20 11 chr2 230697491 230697778 -19990076 + L1 LINE L1 4461 4756 -1626 1997 110 25 88 chr2 230697778 230698178 -19989676 + THE1C LTR MaLR 1 375 0 1106 199 20 11 chr2 230698178 230698197 -19989657 + L1 LINE L1 4756 4773 -1609 1972 158 0 3 chr2 230698964 230699267 -19988587 - AluJb SINE Alu -10 302 1 4019 237 21 50 chr2 230699705 230700425 -19987429 - L1M4b LINE L1 -5326 1533 864 1993 109 0 0 chr2 230700425 230700690 -19987164 - AluSc SINE Alu -15 294 30 4019 237 21 50 chr2 230700690 230701234 -19986620 - L1M4b LINE L1 -5995 864 306 1709 180 30 14 chr2 230701285 230701580 -19986274 + AluJo SINE Alu 1 300 -12 796 268 103 57 chr2 230701603 230701954 -19985900 + L2 LINE L2 2940 3306 -7 615 247 37 19 chr2 230703451 230703613 -19984241 + MIR SINE MIR 2 166 -96 * 792 219 110 9 chr2 230703590 230703809 -19984045 - MIR SINE MIR -1 261 21 235 203 0 81 chr2 230703838 230703912 -19983942 + MIR SINE MIR 175 242 -20 467 266 81 0 chr2 230704513 230704637 -19983217 - MER94 DNA DNA 0 134 1 2400 86 3 0 chr2 230704852 230705155 -19982699 - AluSp SINE Alu -9 304 1 294 321 18 18 chr2 230707376 230707488 -19980366 + L2 LINE L2 2626 2737 -577 680 336 64 0 chr2 230707521 230707756 -19980098 + MIR SINE MIR 8 257 -5 245 277 84 78 chr2 230707974 230708029 -19979825 - L2 LINE L2 -1906 1408 1355 462 36 0 0 chr2 230708029 230708085 -19979769 + (TG)n Simple_repeat Simple_repeat 2 57 0 1630 191 14 0 chr2 230708086 230708368 -19979486 - AluJo SINE Alu -26 286 1 245 277 84 78 chr2 230708368 230708476 -19979378 - L2 LINE L2 -1958 1356 1242 2196 114 0 3 chr2 230710767 230711066 -19976788 - AluSc SINE Alu -11 298 1 21 0 0 0 chr2 230712547 230712568 -19975286 + AT_rich Low_complexity Low_complexity 1 21 0 23 92 0 0 chr2 230713057 230713122 -19974732 + AT_rich Low_complexity Low_complexity 1 65 0 247 324 56 33 chr2 230713483 230713813 -19974041 - L2 LINE L2 -960 2354 1936 1145 268 134 26 chr2 230714226 230714824 -19973030 + L2 LINE L2 2577 3246 -67 217 358 114 0 chr2 230715883 230716006 -19971848 - L3 LINE CR1 -42 1535 1399 2349 59 0 26 chr2 230718419 230718724 -19969130 + AluY SINE Alu 1 297 -14 2154 113 3 23 chr2 230718732 230719042 -19968812 + AluSx SINE Alu 1 304 -8 933 205 78 53 chr2 230719055 230719299 -19968555 + AluJo SINE Alu 54 303 -9 458 182 0 0 chr2 230719716 230719793 -19968061 - MER2 DNA MER2_type -1 344 268 982 119 0 0 chr2 230719819 230719978 -19967876 - MER2 DNA MER2_type -139 206 48 22 70 0 0 chr2 230720511 230720554 -19967300 + AT_rich Low_complexity Low_complexity 1 43 0 382 287 101 0 chr2 230720701 230720830 -19967024 + MIR3 SINE MIR 66 207 -1 22 0 0 0 chr2 230722471 230722493 -19965361 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr2 230723076 230723099 -19964755 + AT_rich Low_complexity Low_complexity 1 23 0 2359 80 7 3 chr2 230723324 230723624 -19964230 + AluSg SINE Alu 1 301 -9 2180 109 3 7 chr2 230723748 230724052 -19963802 - AluSq SINE Alu -9 304 2 1140 107 0 35 chr2 230725083 230725252 -19962602 + AluY SINE Alu 133 295 -16 757 170 118 0 chr2 230725728 230725863 -19961991 + AluJb SINE Alu 136 286 -26 252 220 0 53 chr2 230726253 230726403 -19961451 + T-rich Low_complexity Low_complexity 2 143 0 22 0 0 0 chr2 230726444 230726466 -19961388 + AT_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr2 230726566 230726593 -19961261 + (C)n Simple_repeat Simple_repeat 1 27 0 2283 117 3 0 chr2 230726633 230726942 -19960912 - AluSg SINE Alu 0 310 1 251 271 24 25 chr2 230727421 230727602 -19960252 - L1MC/D LINE L1 -325 5796 5663 29 28 0 0 chr2 230727790 230727826 -19960028 + AT_rich Low_complexity Low_complexity 1 36 0 755 232 170 5 chr2 230728018 230728242 -19959612 + MIR SINE MIR 2 262 0 2083 93 6 78 chr2 230728474 230728795 -19959059 + AluSx SINE Alu 1 298 -14 269 298 32 11 chr2 230729036 230729130 -19958724 + MIR SINE MIR 85 180 -82 24 0 0 0 chr2 230731100 230731124 -19956730 + AT_rich Low_complexity Low_complexity 1 24 0 2274 75 0 4 chr2 230731935 230732216 -19955638 - AluSq SINE Alu -14 299 20 22 0 0 0 chr2 230732270 230732292 -19955562 + AT_rich Low_complexity Low_complexity 1 22 0 181 261 94 113 chr2 230732347 230732719 -19955135 - L2 LINE L2 -42 3230 2866 219 296 102 31 chr2 230732813 230732911 -19954943 + MIR SINE MIR 22 126 -82 413 239 107 0 chr2 230733436 230733633 -19954221 - L1ME4a LINE L1 -193 5928 5711 441 194 20 0 chr2 230733676 230733774 -19954080 - L1ME4a LINE L1 -476 5645 5546 2315 99 0 10 chr2 230733822 230734134 -19953720 - AluSx SINE Alu -3 309 1 22 35 0 0 chr2 230734186 230734215 -19953639 + AT_rich Low_complexity Low_complexity 1 29 0 1342 176 82 25 chr2 230734218 230734497 -19953357 + AluJo SINE Alu 1 295 -17 671 155 16 8 chr2 230734647 230734776 -19953078 + FLAM_C SINE Alu 13 142 -1 346 176 0 68 chr2 230734914 230734988 -19952866 + MIR SINE MIR 194 262 0 200 139 0 28 chr2 230735902 230735938 -19951916 - L2 LINE L2 -224 3048 3014 1585 183 43 23 chr2 230736130 230736431 -19951423 - AluJb SINE Alu -5 307 1 23 54 0 0 chr2 230736465 230736502 -19951352 + AT_rich Low_complexity Low_complexity 1 37 0 365 279 64 101 chr2 230736506 230736725 -19951129 - L2 LINE L2 -17 3255 3045 304 171 243 0 chr2 230737849 230737919 -19949935 + L2 LINE L2 3227 3313 0 215 279 66 0 chr2 230737925 230737986 -19949868 + L2 LINE L2 3200 3264 -8 2086 133 7 3 chr2 230738841 230739150 -19948704 + AluSx SINE Alu 1 310 -2 454 284 99 88 chr2 230740013 230740353 -19947501 - L1M4 LINE L1 -1488 4658 4308 2469 68 0 7 chr2 230740353 230740662 -19947192 + AluY SINE Alu 1 307 -4 454 284 99 88 chr2 230740662 230740878 -19946976 - L1M4 LINE L1 -1838 4308 4096 831 175 170 19 chr2 230740883 230741152 -19946702 - MER33 DNA MER1_type -22 341 1 1927 111 48 0 chr2 230741339 230741610 -19946244 - AluSq SINE Alu -29 284 1 238 281 67 37 chr2 230741713 230741848 -19946006 - L1M4 LINE L1 -2310 3836 3698 688 266 42 8 chr2 230741964 230742201 -19945653 - HAL1 LINE L1 -791 1716 1472 1409 140 46 56 chr2 230742202 230742487 -19945367 - MER1B DNA MER1_type 0 339 58 231 341 56 0 chr2 230742521 230742568 -19945286 - MER94 DNA DNA -1 133 90 2104 126 0 16 chr2 230742568 230742877 -19944977 - AluY SINE Alu -7 304 1 231 341 56 0 chr2 230742877 230742955 -19944899 - MER94 DNA DNA -44 90 1 2259 102 6 13 chr2 230742977 230743292 -19944562 - AluSp SINE Alu 0 313 1 597 248 67 91 chr2 230743297 230743927 -19943927 - HAL1 LINE L1 -1045 1462 848 239 341 68 15 chr2 230743935 230744067 -19943787 + L2 LINE L2 2596 2734 -580 953 247 66 26 chr2 230744147 230744586 -19943268 - MLT1D LTR MaLR -1 504 1 391 255 144 21 chr2 230745036 230745284 -19942570 - L1ME LINE L1 -462 5659 5381 183 224 75 30 chr2 230745376 230745443 -19942411 - MIR SINE MIR -94 168 99 198 278 69 42 chr2 230745490 230745562 -19942292 - MIR SINE MIR -163 99 26 2161 123 0 0 chr2 230745564 230745856 -19941998 - AluSx SINE Alu -20 292 1 2552 76 8 19 chr2 230745869 230746238 -19941616 - L1PA8 LINE L1 -3 6169 5805 5143 146 16 9 chr2 230746554 230747436 -19940418 - L1MC1 LINE L1 0 6333 5446 32 67 0 0 chr2 230747700 230747760 -19940094 + AT_rich Low_complexity Low_complexity 1 60 0 1980 147 0 3 chr2 230750442 230750750 -19937104 - AluSx SINE Alu 0 307 1 240 305 114 19 chr2 230751103 230751208 -19936646 - MIR3 SINE MIR -38 170 56 180 158 88 35 chr2 230752621 230752678 -19935176 + MIR SINE MIR 166 225 -37 276 273 14 7 chr2 230753464 230753603 -19934251 + CT-rich Low_complexity Low_complexity 1 140 0 742 207 24 18 chr2 230753632 230753801 -19934053 - FRAM SINE Alu -6 170 1 30 59 0 0 chr2 230753877 230753928 -19933926 + AT_rich Low_complexity Low_complexity 1 51 0 377 335 38 38 chr2 230754550 230754735 -19933119 - L1MC4a LINE L1 -1926 5882 5698 269 233 342 0 chr2 230754764 230754884 -19932970 + L2 LINE L2 535 695 -2619 519 251 385 20 chr2 230754931 230755429 -19932425 + L2 LINE L2 1269 1948 -1366 341 253 40 0 chr2 230755430 230755529 -19932325 - L1ME LINE L1 -800 5364 5262 270 256 87 123 chr2 230755694 230755889 -19931965 - MER5A DNA MER1_type 0 189 2 2152 60 4 14 chr2 230755889 230756170 -19931684 + AluY SINE Alu 34 311 0 378 338 103 19 chr2 230756214 230756593 -19931261 + L1M4 LINE L1 4772 5182 -964 1436 124 5 5 chr2 230756598 230756816 -19931038 + AluSc SINE Alu 92 309 0 3041 141 72 17 chr2 230756828 230757353 -19930501 - MER41C LTR ERV1 0 554 1 1303 219 59 3 chr2 230758518 230758892 -19928962 - L1ME LINE L1 -1129 5017 4623 2447 73 3 3 chr2 230758978 230759281 -19928573 + AluSc SINE Alu 1 303 -6 1731 127 82 136 chr2 230759877 230760326 -19927528 - MER61B LTR ERV1 0 425 1 1559 213 3 13 chr2 230760453 230760754 -19927100 - AluJb SINE Alu -14 298 1 2871 13 0 0 chr2 230761306 230761618 -19926236 + AluYb8 SINE Alu 1 312 -6 313 164 7 0 chr2 230763759 230763834 -19924020 + LOR1-int LTR ERV1 1210 1423 -3513 1352 189 19 71 chr2 230763842 230764164 -19923690 - AluJo SINE Alu -7 305 1 3658 180 41 9 chr2 230764417 230765227 -19922627 - L1MB2 LINE L1 0 6171 5336 1714 177 17 42 chr2 230765470 230765826 -19922028 + MER7A DNA MER2_type 1 345 -1 1616 149 0 97 chr2 230765863 230766192 -19921662 - AluJo SINE Alu -15 297 1 23 33 0 0 chr2 230767222 230767252 -19920602 + AT_rich Low_complexity Low_complexity 1 30 0 204 67 0 0 chr2 230768048 230768078 -19919776 + (A)n Simple_repeat Simple_repeat 1 30 0 528 164 19 19 chr2 230771339 230771443 -19916411 - Charlie1 DNA MER1_type 0 2761 2658 2290 107 7 0 chr2 230772231 230772541 -19915313 - AluSx SINE Alu 0 312 1 324 301 7 14 chr2 230772683 230772829 -19915025 + L1ME LINE L1 5595 5739 -382 2189 122 39 28 chr2 230773652 230774012 -19913842 + THE1B LTR MaLR 1 364 0 1768 172 78 8 chr2 230774494 230774855 -19912999 + MLT1B LTR MaLR 5 390 0 326 275 42 69 chr2 230774880 230775069 -19912785 - L1ME4a LINE L1 -224 5897 5714 213 39 0 0 chr2 230775210 230775236 -19912618 + (TG)n Simple_repeat Simple_repeat 2 27 0 1535 164 131 0 chr2 230775494 230775645 -19912209 - AluJo SINE Alu -2 310 180 194 61 0 30 chr2 230775645 230775678 -19912176 + (TTAA)n Simple_repeat Simple_repeat 2 33 0 1535 164 131 0 chr2 230775678 230775800 -19912054 - AluJo SINE Alu -132 180 1 1059 163 28 28 chr2 230776544 230776759 -19911095 - THE1C LTR MaLR -160 215 1 638 135 156 0 chr2 230776762 230776903 -19910951 - L1ME2 LINE L1 -208 5956 5794 183 237 11 129 chr2 230777235 230777328 -19910526 + L2 LINE L2 3232 3313 0 241 271 17 0 chr2 230777634 230777693 -19910161 + L2 LINE L2 3252 3311 -2 394 334 115 15 chr2 230779496 230779834 -19908020 + L2 LINE L2 2580 2951 -363 419 204 102 0 chr2 230779982 230780119 -19907735 - MER33 DNA MER1_type 0 324 174 1257 243 80 38 chr2 230780123 230780378 -19907476 - MLT2B1 LTR ERVL 0 520 277 1439 186 108 47 chr2 230780378 230780722 -19907132 + MLT1A1 LTR MaLR 1 365 0 1257 243 80 38 chr2 230780722 230780965 -19906889 - MLT2B1 LTR ERVL -243 277 1 684 184 36 30 chr2 230780965 230781133 -19906721 - MER33 DNA MER1_type -149 175 7 250 377 107 0 chr2 230781161 230781283 -19906571 + L2 LINE L2 3138 3272 0 1770 182 0 7 chr2 230782663 230782954 -19904900 + AluJo SINE Alu 1 289 -23 31720 51 2 0 chr2 230783279 230787449 -19900405 + L1P LINE L1 716 4891 -1255 698 133 139 38 chr2 230787549 230787707 -19900147 + THE1C LTR MaLR 202 375 0 229 248 26 97 chr2 230787717 230787830 -19900024 + L1ME2 LINE L1 5965 6069 -95 531 247 134 27 chr2 230787977 230788200 -19899654 + MIR SINE MIR 6 252 -10 1757 146 11 25 chr2 230788316 230788591 -19899263 + AluJb SINE Alu 9 279 -33 185 0 40 0 chr2 230788593 230788618 -19899236 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 189 279 0 33 chr2 230788673 230788734 -19899120 + L2 LINE L2 2997 3055 -217 31 44 0 0 chr2 230788813 230788858 -19898996 + AT_rich Low_complexity Low_complexity 1 45 0 474 325 33 24 chr2 230789079 230789291 -19898563 + MIR SINE MIR 49 262 0 1968 127 0 0 chr2 230789506 230789781 -19898073 + AluSq SINE Alu 37 311 -2 281 261 42 42 chr2 230789925 230790044 -19897810 - MIR SINE MIR -112 150 32 2160 90 0 35 chr2 230790463 230790774 -19897080 + AluY SINE Alu 1 300 -11 261 139 0 0 chr2 230790902 230790945 -19896909 + (CA)n Simple_repeat Simple_repeat 2 44 0 243 0 0 0 chr2 230793842 230793869 -19893985 + (TG)n Simple_repeat Simple_repeat 2 28 0 2704 251 83 40 chr2 230794798 230795776 -19892078 + L1MDb LINE L1 782 1822 -4584 2292 106 3 3 chr2 230795776 230796088 -19891766 + AluSq SINE Alu 1 312 -1 2704 251 83 40 chr2 230796088 230796859 -19890995 + L1MDb LINE L1 1822 2558 -3848 343 336 29 43 chr2 230796861 230797017 -19890837 + L1 LINE L1 4158 4313 -1833 2119 130 0 0 chr2 230797017 230797327 -19890527 + AluSx SINE Alu 1 310 0 343 336 29 43 chr2 230797327 230797377 -19890477 + L1 LINE L1 4313 4362 -1784 420 99 14 0 chr2 230797431 230797502 -19890352 - L1PB2 LINE L1 0 6151 6080 2058 100 64 25 chr2 230797735 230798096 -19889758 - THE1C LTR MaLR 0 375 1 277 259 24 0 chr2 230799499 230799584 -19888270 + L2 LINE L2 3225 3311 -2 256 342 0 43 chr2 230801543 230801660 -19886194 - L2 LINE L2 -213 3059 2948 1937 157 0 0 chr2 230801896 230802176 -19885678 + AluSx SINE Alu 1 280 -32 183 42 0 0 chr2 230802176 230802200 -19885654 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 188 389 40 8 chr2 230802203 230802329 -19885525 - L2 LINE L2 -619 2695 2566 748 163 78 0 chr2 230802637 230802766 -19885088 + MLT1A1 LTR MaLR 1 139 -226 2079 107 70 53 chr2 230802767 230803123 -19884731 + THE1B LTR MaLR 3 364 0 11886 94 4 4 chr2 230803123 230804703 -19883151 + THE1A-int LTR MaLR 1 1580 0 2634 83 20 3 chr2 230804703 230805052 -19882802 + THE1A LTR MaLR 1 355 0 2217 105 35 62 chr2 230805936 230805974 -19881880 - THE1B LTR MaLR -4 360 322 2259 93 23 0 chr2 230805974 230806274 -19881580 + AluSp SINE Alu 2 308 -5 2217 105 35 62 chr2 230806274 230806605 -19881249 - THE1B LTR MaLR -42 322 1 1644 204 10 3 chr2 230807436 230807730 -19880124 + AluJb SINE Alu 1 296 -16 189 319 64 14 chr2 230808087 230808228 -19879626 + L2 LINE L2 2911 3058 -214 575 233 32 64 chr2 230808268 230808582 -19879272 - HAL1 LINE L1 -1208 1299 996 22 35 0 0 chr2 230810490 230810519 -19877335 + AT_rich Low_complexity Low_complexity 1 29 0 405 0 0 0 chr2 230810521 230810566 -19877288 + (TA)n Simple_repeat Simple_repeat 1 45 0 344 22 22 0 chr2 230810613 230810658 -19877196 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 3200 167 19 21 chr2 230810668 230811050 -19876804 - L1MB4 LINE L1 -4 6176 5792 1808 164 4 7 chr2 230811050 230811358 -19876496 + AluJb SINE Alu 3 309 0 3200 167 19 21 chr2 230811358 230811603 -19876251 - L1MB4 LINE L1 -388 5792 5548 244 246 0 0 chr2 230811603 230811660 -19876194 - MIR SINE MIR -129 133 77 2323 65 0 0 chr2 230812538 230812830 -19875024 - THE1A-int LTR MaLR -1288 292 1 2742 77 17 0 chr2 230812830 230813179 -19874675 - THE1A LTR MaLR 0 355 1 470 327 169 29 chr2 230813429 230813464 -19874390 - L2 LINE L2 -556 2758 2729 2876 163 16 33 chr2 230813464 230813557 -19874297 + L1MB8 LINE L1 5605 5698 -480 2138 128 10 0 chr2 230813557 230813853 -19874001 + AluSx SINE Alu 1 299 -13 2876 163 16 33 chr2 230813853 230814337 -19873517 + L1MB8 LINE L1 5698 6172 -6 470 327 169 29 chr2 230814337 230815138 -19872716 - L2 LINE L2 -585 2729 1805 394 282 79 50 chr2 230815144 230815385 -19872469 - LTR16A1 LTR ERVL -1 456 209 252 215 152 13 chr2 230815990 230816069 -19871785 - MIR SINE MIR -56 206 117 2042 254 100 11 chr2 230816228 230816930 -19870924 - L2 LINE L2 -574 2740 1977 901 240 20 20 chr2 230816933 230817137 -19870717 - MER20 DNA MER1_type -15 204 1 210 191 0 0 chr2 230817736 230817783 -19870071 + (CA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr2 230817803 230817824 -19870030 + AT_rich Low_complexity Low_complexity 1 21 0 249 346 73 7 chr2 230818248 230818384 -19869470 - MER5B DNA MER1_type 0 178 34 2189 133 0 0 chr2 230818508 230818808 -19869046 - AluSg SINE Alu -10 300 1 721 281 51 8 chr2 230819654 230819889 -19867965 - MIR SINE MIR 0 262 18 2112 142 0 0 chr2 230820858 230821153 -19866701 - AluJb SINE Alu -17 295 1 3628 131 67 0 chr2 230821855 230822450 -19865404 - LTR24C LTR ERV1 0 635 1 1208 247 61 6 chr2 230822690 230823018 -19864836 - L1ME3 LINE L1 -6 6156 5811 200 261 33 11 chr2 230823744 230823836 -19864018 - MIR SINE MIR -71 137 44 1886 132 29 67 chr2 230824171 230824557 -19863297 - L1MA9 LINE L1 -289 6023 5653 495 0 0 0 chr2 230824565 230824620 -19863234 + (CA)n Simple_repeat Simple_repeat 1 55 0 664 188 7 20 chr2 230824620 230824769 -19863085 + L1MA9 LINE L1 6166 6312 0 573 329 47 0 chr2 230826651 230826885 -19860969 + MIR SINE MIR 16 260 -2 370 146 9 118 chr2 230827192 230827234 -19860620 - MER5A DNA MER1_type -83 106 61 2132 131 3 3 chr2 230827234 230827547 -19860307 - AluSp SINE Alu 0 313 1 370 146 9 118 chr2 230827547 230827614 -19860240 - MER5A DNA MER1_type -128 61 9 28 0 0 0 chr2 230827846 230827874 -19859980 + AT_rich Low_complexity Low_complexity 1 28 0 207 88 0 0 chr2 230827875 230827909 -19859945 + (TCTA)n Simple_repeat Simple_repeat 4 37 0 501 113 38 66 chr2 230827911 230828017 -19859837 + LTR8A LTR ERV1 434 536 -191 234 62 0 0 chr2 230828030 230828062 -19859792 + (CA)n Simple_repeat Simple_repeat 2 33 0 2290 190 77 110 chr2 230828804 230829556 -19858298 - LTR8A LTR ERV1 0 727 1 979 237 37 5 chr2 230831274 230831489 -19856365 - MLT1A1 LTR MaLR -7 358 137 1866 128 88 57 chr2 230831492 230831845 -19856009 - THE1B LTR MaLR 0 364 1 947 123 19 7 chr2 230831845 230831901 -19855953 - THE1B-int LTR MaLR 0 1580 1526 2146 142 0 3 chr2 230831901 230832212 -19855642 + AluSg SINE Alu 1 310 0 947 123 19 7 chr2 230832212 230832310 -19855544 - THE1B-int LTR MaLR -54 1526 1424 7424 49 5 0 chr2 230832410 230833600 -19854254 + L1PA5 LINE L1 4959 6152 -2 475 254 74 0 chr2 230833660 230833782 -19854072 - MER5B DNA MER1_type -46 132 2 568 240 41 82 chr2 230833783 230833982 -19853872 + MLT1F1 LTR MaLR 1 160 -370 2548 111 11 3 chr2 230834585 230834946 -19852908 - THE1B LTR MaLR 0 364 1 1787 163 3 20 chr2 230836279 230836579 -19851275 - AluJo SINE Alu -17 295 1 383 301 37 15 chr2 230836788 230836924 -19850930 - MIR SINE MIR 0 262 124 450 173 90 45 chr2 230837548 230837681 -19850173 + MIR SINE MIR 95 233 -29 774 205 70 65 chr2 230837710 230837860 -19849994 - MER20 DNA MER1_type -1 218 64 2113 116 0 3 chr2 230837860 230838170 -19849684 + AluSq SINE Alu 1 309 0 774 205 70 65 chr2 230838170 230838233 -19849621 - MER20 DNA MER1_type -155 64 3 239 277 18 0 chr2 230838235 230838325 -19849529 + (TA)n Simple_repeat Simple_repeat 2 96 -19 2296 160 59 5 chr2 230838325 230838768 -19849086 - MLT1C LTR MaLR 0 467 1 239 277 18 0 chr2 230838768 230838789 -19849065 + (TA)n Simple_repeat Simple_repeat 96 115 0 249 321 65 53 chr2 230838790 230839052 -19848802 - Charlie8 DNA MER1_type -1002 1415 64 319 314 119 0 chr2 230839240 230839358 -19848496 + MER94 DNA DNA 3 134 0 680 159 0 0 chr2 230839537 230839644 -19848210 - AluJb SINE Alu -204 108 2 236 322 6 18 chr2 230840372 230840486 -19847368 - MIR SINE MIR -86 122 10 314 266 113 48 chr2 230841088 230841212 -19846642 + MIR3 SINE MIR 29 160 -48 2279 95 3 3 chr2 230841412 230841707 -19846147 + AluY SINE Alu 1 295 -16 2361 111 0 0 chr2 230842654 230842960 -19844894 - AluSx SINE Alu -6 306 1 251 322 6 18 chr2 230843339 230843453 -19844401 - MIR SINE MIR -86 122 10 557 226 107 6 chr2 230843612 230843771 -19844083 - MLT1J2 LTR MaLR 0 450 276 363 296 62 13 chr2 230843777 230843982 -19843872 - MLT1I LTR MaLR -227 199 1 261 296 0 0 chr2 230844233 230844304 -19843550 + MIR3 SINE MIR 99 169 -39 253 287 308 7 chr2 230845317 230845460 -19842394 + MIR SINE MIR 33 218 -44 2172 161 92 0 chr2 230845480 230845872 -19841982 - MSTA LTR MaLR 0 428 1 438 69 0 0 chr2 230845874 230845932 -19841922 + (TCCA)n Simple_repeat Simple_repeat 4 61 0 1947 136 7 3 chr2 230846277 230846564 -19841290 - AluSx SINE Alu -24 288 1 310 288 0 0 chr2 230847561 230847641 -19840213 + MIR3 SINE MIR 98 177 -31 2567 107 14 16 chr2 230847790 230848155 -19839699 + THE1B LTR MaLR 1 364 0 216 310 55 14 chr2 230848453 230848598 -19839256 + L3 LINE CR1 1250 1400 -177 5812 147 22 3 chr2 230849353 230850704 -19837150 - L1PA16 LINE L1 -9 6157 4787 3636 146 25 79 chr2 230852523 230853254 -19834600 - LTR8 LTR ERV1 0 691 1 305 248 69 62 chr2 230853385 230853530 -19834324 + MIR SINE MIR 7 152 -110 1082 248 8 23 chr2 230853581 230853839 -19834015 - MIR SINE MIR -3 259 6 977 237 52 8 chr2 230853865 230854114 -19833740 + L1M4 LINE L1 3 262 -6280 2032 234 25 39 chr2 230854426 230854935 -19832919 + L1M4 LINE L1 281 782 -5760 * 3072 9 3 0 chr2 230854932 230855275 -19832579 + L1HS LINE L1 5812 6155 0 183 42 0 0 chr2 230855278 230855302 -19832552 + (A)n Simple_repeat Simple_repeat 1 24 0 902 220 30 25 chr2 230855302 230855502 -19832352 + L1M4 LINE L1 766 966 -5576 4719 188 69 49 chr2 230855506 230855803 -19832051 + L1M4 LINE L1 4647 4937 -1707 2918 79 117 9 chr2 230855803 230856223 -19831631 + MER4C LTR ERV1 1 465 0 4719 188 69 49 chr2 230856223 230857132 -19830722 + L1M4 LINE L1 4937 5877 -767 718 206 6 6 chr2 230857510 230857690 -19830164 + CT-rich Low_complexity Low_complexity 1 180 0 1099 101 0 17 chr2 230857692 230857871 -19829983 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 1801 159 7 0 chr2 230857871 230858148 -19829706 - AluSx SINE Alu -33 279 1 309 243 83 62 chr2 230859361 230859543 -19828311 + MIR SINE MIR 41 231 -31 278 333 0 12 chr2 230859551 230859632 -19828222 - L2 LINE L2 -2 3311 3232 202 238 175 0 chr2 230859771 230859834 -19828020 - MIR SINE MIR -17 245 172 2290 84 50 0 chr2 230860306 230860603 -19827251 + AluSq SINE Alu 1 312 -1 748 185 116 6 chr2 230861014 230861187 -19826667 - MIR SINE MIR -67 195 4 2428 76 0 10 chr2 230861413 230861727 -19826127 - AluY SINE Alu 0 311 1 393 301 40 72 chr2 230862033 230862309 -19825545 + L2 LINE L2 2812 3078 -194 184 364 18 0 chr2 230862391 230862446 -19825408 + L2 LINE L2 3136 3191 -81 823 229 6 11 chr2 230862482 230862665 -19825189 + MIR SINE MIR 48 229 -33 208 265 163 31 chr2 230863193 230863291 -19824563 - MIR SINE MIR -136 126 16 219 36 0 0 chr2 230863472 230863500 -19824354 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2267 111 46 32 chr2 230863531 230863901 -19823953 - THE1C LTR MaLR 0 375 1 390 301 48 36 chr2 230864219 230864385 -19823469 + MIR SINE MIR 12 179 -83 1761 206 28 54 chr2 230864469 230864931 -19822923 + L1M4 LINE L1 4759 5208 -938 432 55 0 0 chr2 230865375 230865430 -19822424 + (CTATT)n Simple_repeat Simple_repeat 1 55 0 1589 192 0 4 chr2 230865438 230865714 -19822140 - AluJo SINE Alu -37 275 1 23 0 0 0 chr2 230867063 230867086 -19820768 + AT_rich Low_complexity Low_complexity 1 23 0 274 315 54 36 chr2 230867257 230867368 -19820486 - MIR SINE MIR -66 142 30 214 270 22 45 chr2 230869848 230869937 -19817917 + MIR SINE MIR 17 103 -105 25 53 0 18 chr2 230870393 230870431 -19817423 + AT_rich Low_complexity Low_complexity 1 39 -17 2282 114 0 0 chr2 230870431 230870739 -19817115 - AluSx SINE Alu -4 308 1 25 53 0 18 chr2 230870739 230870757 -19817097 + AT_rich Low_complexity Low_complexity 39 56 0 26 0 0 0 chr2 230871163 230871189 -19816665 + AT_rich Low_complexity Low_complexity 1 26 0 224 272 27 15 chr2 230872958 230873041 -19814813 + MIR SINE MIR 45 128 -80 252 289 0 0 chr2 230874037 230874127 -19813727 + L1MC4 LINE L1 6614 6703 -1339 330 281 22 0 chr2 230874136 230874225 -19813629 + L1MC4 LINE L1 6615 6705 -1337 258 309 29 72 chr2 230874239 230874331 -19813523 - MIR SINE MIR -53 209 115 1187 114 12 0 chr2 230874331 230874497 -19813357 + L1PB1 LINE L1 5976 6143 -8 236 89 0 22 chr2 230874504 230874549 -19813305 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 258 309 29 72 chr2 230874549 230874655 -19813199 - MIR SINE MIR -153 109 12 226 267 92 0 chr2 230874660 230874773 -19813081 + MIR SINE MIR 33 154 -76 355 339 9 9 chr2 230875328 230875437 -19812417 - MIR3 SINE MIR -18 190 82 2240 94 0 0 chr2 230875440 230875717 -19812137 + AluSq SINE Alu 1 277 -36 726 247 89 32 chr2 230876692 230876780 -19811074 - MIR SINE MIR 0 262 180 2197 110 30 0 chr2 230876780 230877079 -19810775 - AluSx SINE Alu -4 308 1 726 247 89 32 chr2 230877079 230877237 -19810617 - MIR SINE MIR -82 180 2 185 243 63 45 chr2 230877298 230877409 -19810445 + L2 LINE L2 2292 2404 -910 213 235 71 82 chr2 230877956 230878054 -19809800 - L2 LINE L2 0 3313 3217 27 0 0 0 chr2 230878358 230878385 -19809469 + AT_rich Low_complexity Low_complexity 1 27 0 222 342 132 20 chr2 230878691 230879039 -19808815 - L2 LINE L2 -951 2363 1977 234 0 0 0 chr2 230879119 230879145 -19808709 + (TG)n Simple_repeat Simple_repeat 1 26 0 1335 138 102 16 chr2 230879154 230879408 -19808446 - L1PA16 LINE L1 -2 6164 5889 22 56 0 0 chr2 230880607 230880643 -19807211 + AT_rich Low_complexity Low_complexity 1 36 0 204 40 0 0 chr2 230881003 230881028 -19806826 + (CA)n Simple_repeat Simple_repeat 2 26 0 300 279 292 7 chr2 230881342 230881496 -19806358 - MIR SINE MIR -10 252 55 22 56 0 0 chr2 230882271 230882307 -19805547 + AT_rich Low_complexity Low_complexity 1 36 0 245 192 82 14 chr2 230882873 230882946 -19804908 + MIR SINE MIR 184 261 -1 210 319 91 95 chr2 230883265 230883497 -19804357 - L2 LINE L2 -50 3222 2992 225 292 167 0 chr2 230883498 230883570 -19804284 + MIR3 SINE MIR 119 202 -6 288 208 152 32 chr2 230884183 230884207 -19803647 - L1MA10 LINE L1 -2 6332 6309 3228 228 47 10 chr2 230884207 230884989 -19802865 - L1ME1 LINE L1 -31 6135 5325 562 319 20 39 chr2 230885279 230885533 -19802321 + MIR SINE MIR 8 256 -6 296 229 12 36 chr2 230886341 230886424 -19801430 - MIR3 SINE MIR -1 207 127 2189 119 110 0 chr2 230887075 230887403 -19800451 - THE1B LTR MaLR 0 364 1 297 0 0 0 chr2 230887847 230887880 -19799974 + (TG)n Simple_repeat Simple_repeat 1 33 0 742 177 11 80 chr2 230888725 230888900 -19798954 - MER5A DNA MER1_type -26 163 1 351 292 19 39 chr2 230889264 230889418 -19798436 + L2 LINE L2 3163 3313 0 920 289 16 0 chr2 230889660 230889913 -19797941 - MIR SINE MIR 0 262 6 2380 110 0 0 chr2 230890389 230890698 -19797156 - AluSq SINE Alu -4 309 1 210 171 0 0 chr2 230890764 230890799 -19797055 + (TA)n Simple_repeat Simple_repeat 2 36 0 868 177 111 5 chr2 230890993 230891191 -19796663 + MSTA LTR MaLR 10 228 -200 1248 115 105 5 chr2 230891320 230891511 -19796343 + MSTA LTR MaLR 219 428 0 227 315 88 66 chr2 230891712 230891893 -19795961 - MLT1I LTR MaLR 0 409 225 2229 156 13 13 chr2 230891900 230892278 -19795576 + MLT1B LTR MaLR 5 382 -8 2302 169 22 0 chr2 230892553 230892909 -19794945 - THE1B LTR MaLR 0 364 1 223 374 62 31 chr2 230893022 230893217 -19794637 - L3 LINE CR1 -20 1557 1357 2377 74 0 7 chr2 230893345 230893641 -19794213 + AluSg SINE Alu 1 294 -16 22 35 0 0 chr2 230894481 230894510 -19793344 + AT_rich Low_complexity Low_complexity 1 29 0 324 48 0 0 chr2 230894680 230894722 -19793132 + (TG)n Simple_repeat Simple_repeat 2 43 0 762 244 6 17 chr2 230895247 230895423 -19792431 - MER5B DNA MER1_type -3 175 2 783 104 0 0 chr2 230895752 230895867 -19791987 + (TCCC)n Simple_repeat Simple_repeat 4 118 0 6349 117 18 3 chr2 230895942 230897348 -19790506 + L1PA15 LINE L1 4750 6165 0 213 121 0 0 chr2 230897376 230897409 -19790445 + (A)n Simple_repeat Simple_repeat 1 33 0 861 283 12 26 chr2 230898345 230898684 -19789170 + MER20B DNA MER1_type 367 700 -83 1967 138 3 3 chr2 230898716 230899013 -19788841 - AluSx SINE Alu -15 297 1 28 29 0 0 chr2 230899110 230899145 -19788709 + AT_rich Low_complexity Low_complexity 1 35 0 233 322 14 14 chr2 230899604 230899714 -19788140 + MIR SINE MIR 35 145 -63 537 302 12 17 chr2 230899840 230900012 -19787842 + MIR3 SINE MIR 23 193 -15 1105 93 0 7 chr2 230900275 230900414 -19787440 + AluJb SINE Alu 12 149 -163 339 289 99 21 chr2 230900511 230900653 -19787201 + L2 LINE L2 3097 3290 -23 188 293 146 0 chr2 230900782 230900864 -19786990 + MIR SINE MIR 29 122 -140 1141 213 39 12 chr2 230901056 230901310 -19786544 - MLT1B LTR MaLR 0 390 130 804 180 73 0 chr2 230901318 230901468 -19786386 - AluSg/x SINE Alu -18 292 132 2165 117 0 10 chr2 230901468 230901766 -19786088 - AluSg SINE Alu -15 295 1 305 268 73 0 chr2 230901773 230901896 -19785958 - MLT1B LTR MaLR -258 132 1 217 162 0 0 chr2 230902517 230902554 -19785300 - L2 LINE L2 -13 3259 3223 198 263 147 21 chr2 230902742 230902837 -19785017 - MIR SINE MIR -25 237 131 231 280 53 27 chr2 230905517 230905592 -19782262 - MIR3 SINE MIR -43 165 89 1268 209 138 67 chr2 230906117 230906595 -19781259 - MLT2B1 LTR ERVL 0 520 9 207 233 22 11 chr2 230906595 230906685 -19781169 + A-rich Low_complexity Low_complexity 1 91 0 298 313 68 53 chr2 230907661 230907942 -19779912 + L2 LINE L2 2365 2649 -665 21 57 0 0 chr2 230909861 230909896 -19777958 + AT_rich Low_complexity Low_complexity 1 35 0 584 170 0 0 chr2 230910031 230910125 -19777729 + AluJ/FLAM SINE Alu 1 94 -218 235 230 0 0 chr2 230910157 230910206 -19777648 - MIR SINE MIR -103 105 56 204 290 49 0 chr2 230911203 230911276 -19776578 - MIR SINE MIR -98 110 29 2205 126 10 0 chr2 230911492 230911801 -19776053 - AluSx SINE Alu 0 312 1 735 233 95 23 chr2 230912553 230912900 -19774954 - MER69 DNA AcHobo -11 2515 2144 666 263 16 0 chr2 230912935 230913121 -19774733 - MER69 DNA AcHobo -615 611 423 3855 200 93 15 chr2 230913181 230914173 -19773681 + L1MD2 LINE L1 5099 6197 -162 240 35 0 0 chr2 230914173 230914202 -19773652 + (CA)n Simple_repeat Simple_repeat 2 30 0 3855 200 93 15 chr2 230914202 230914379 -19773475 + L1MD2 LINE L1 6197 6359 0 1119 270 58 17 chr2 230914381 230914729 -19773125 - MER69 DNA AcHobo -2132 394 33 375 324 62 17 chr2 230916542 230916721 -19771133 + MIR3 SINE MIR 17 203 -5 359 260 182 26 chr2 230916748 230916902 -19770952 - MIR SINE MIR -6 256 79 339 240 58 76 chr2 230916906 230917114 -19770740 - MLT1K LTR MaLR -2 586 376 536 239 0 0 chr2 230917114 230917223 -19770631 + MER81 DNA DNA 3 111 -3 339 240 58 76 chr2 230917223 230917390 -19770464 - MLT1K LTR MaLR -212 376 158 192 211 79 0 chr2 230917509 230917547 -19770307 - MIR SINE MIR -181 81 41 356 311 73 37 chr2 230918417 230918581 -19769273 + MLT1K LTR MaLR 2 171 -417 1436 190 164 19 chr2 230918582 230919009 -19768845 - LTR54B LTR ERV1 -2 496 8 577 297 214 12 chr2 230919019 230919346 -19768508 + MLT1K LTR MaLR 194 586 -2 287 331 39 8 chr2 230920505 230920632 -19767222 + MLT1J LTR MaLR 103 233 -278 650 211 100 27 chr2 230920885 230921146 -19766708 - MER113 DNA MER1_type? -181 340 61 264 70 0 0 chr2 230921280 230921323 -19766531 + Alu SINE Alu 260 302 0 4122 182 34 12 chr2 230921442 230922432 -19765422 - L1MB7 LINE L1 0 6184 5174 234 105 0 0 chr2 230922476 230922514 -19765340 + (TCCA)n Simple_repeat Simple_repeat 4 41 0 2475 78 13 0 chr2 230922983 230923292 -19764562 + AluSq SINE Alu 1 313 0 2109 153 34 13 chr2 230924585 230924972 -19762882 + MLT2C1 LTR ERVL 3 397 0 536 221 44 0 chr2 230924998 230925111 -19762743 + L2 LINE L2 3195 3312 -1 288 53 0 0 chr2 230925592 230925630 -19762224 + (TG)n Simple_repeat Simple_repeat 1 38 0 183 129 0 0 chr2 230925630 230925661 -19762193 + (GA)n Simple_repeat Simple_repeat 2 32 0 1266 133 49 58 chr2 230926091 230926317 -19761537 - AluSg/x SINE Alu -2 310 87 2060 234 28 16 chr2 230926469 230926978 -19760876 - LTR40a LTR ERVL 0 519 5 443 303 35 0 chr2 230927251 230927393 -19760461 - MIR SINE MIR -6 256 110 1663 174 48 54 chr2 230927786 230928178 -19759676 - MLT1B LTR MaLR 0 390 1 1764 262 45 25 chr2 230928409 230928936 -19758918 - MLT1E LTR MaLR -5 588 51 193 271 0 0 chr2 230929626 230929674 -19758180 - MIR SINE MIR -189 73 26 2460 77 0 10 chr2 230930256 230930567 -19757287 + AluSc SINE Alu 1 308 -1 305 253 63 0 chr2 230931558 230931637 -19756217 + MIR SINE MIR 99 182 -80 353 329 58 34 chr2 230931759 230931966 -19755888 + MIR SINE MIR 10 221 -41 404 246 109 0 chr2 230932552 230932662 -19755192 - L2 LINE L2 0 3313 3192 331 322 40 27 chr2 230933398 230933547 -19754307 - L2 LINE L2 -1 3271 3121 200 222 0 0 chr2 230934564 230934609 -19753245 + A-rich Low_complexity Low_complexity 1 45 0 2631 147 15 50 chr2 230935808 230936351 -19751503 - L1MA8 LINE L1 -281 6010 5487 564 129 40 24 chr2 230936345 230936469 -19751385 + L1 LINE L1 4198 4323 -1823 * 735 159 55 55 chr2 230936761 230936924 -19750930 - MER5B DNA MER1_type -12 166 4 316 244 0 24 chr2 230936946 230937028 -19750826 + MIR SINE MIR 183 262 0 2120 144 0 0 chr2 230937841 230938140 -19749714 + AluSx SINE Alu 1 299 -13 265 305 67 29 chr2 230938847 230938952 -19748902 + MIR SINE MIR 26 134 -74 559 296 102 33 chr2 230939009 230939313 -19748541 + MLT1I LTR MaLR 85 409 0 215 236 18 18 chr2 230939736 230939791 -19748063 + CT-rich Low_complexity Low_complexity 3 57 0 297 222 16 0 chr2 230940139 230940202 -19747652 - L2 LINE L2 0 3313 3250 935 262 49 13 chr2 230940351 230940656 -19747198 - LTR16A LTR ERVL 0 450 135 203 265 0 0 chr2 230941516 230941565 -19746289 - L2 LINE L2 0 3313 3265 3839 109 26 21 chr2 230942213 230942644 -19745210 - MER41B LTR ERV1 -7 628 192 2155 102 0 36 chr2 230942644 230942949 -19744905 - AluSx SINE Alu -14 298 5 3839 109 26 21 chr2 230942949 230943142 -19744712 - MER41B LTR ERV1 -443 192 1 257 233 57 113 chr2 230943713 230943872 -19743982 - MIR3 SINE MIR -58 150 1 210 127 48 63 chr2 230947551 230947614 -19740240 + MIR SINE MIR 86 147 -115 714 140 35 7 chr2 230947617 230947760 -19740094 + L1 LINE L1 4741 4887 -1259 255 264 107 60 chr2 230947787 230948003 -19739851 + L1ME LINE L1 1447 1672 -4724 21 0 0 0 chr2 230948127 230948148 -19739706 + AT_rich Low_complexity Low_complexity 1 21 0 974 298 119 42 chr2 230948426 230949527 -19738327 + L1ME LINE L1 3996 5224 -991 449 220 77 92 chr2 230949601 230949790 -19738064 + L1ME LINE L1 5342 5525 -706 1108 135 48 0 chr2 230949790 230949998 -19737856 + L1MA9 LINE L1 6093 6310 -2 449 220 77 92 chr2 230949998 230950135 -19737719 + L1ME LINE L1 5525 5663 -568 7679 23 0 1 chr2 230950172 230951264 -19736590 + L1PA4 LINE L1 5062 6152 -3 432 21 62 31 chr2 230951271 230951368 -19736486 + (TAA)n Simple_repeat Simple_repeat 3 102 0 1294 238 58 62 chr2 230952102 230952620 -19735234 + MLT2B1 LTR ERVL 3 518 -2 732 274 59 22 chr2 230952623 230953054 -19734800 + L1ME3 LINE L1 5393 5860 -306 198 0 0 0 chr2 230953507 230953529 -19734325 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 2001 142 0 0 chr2 230953531 230953812 -19734042 - AluSx SINE Alu -31 281 1 222 156 0 22 chr2 230954041 230954086 -19733768 + CT-rich Low_complexity Low_complexity 4 47 0 627 304 117 29 chr2 230954105 230954660 -19733194 - L1M4 LINE L1 -2496 3650 3047 326 187 67 22 chr2 230955979 230956113 -19731741 + (TTATA)n Simple_repeat Simple_repeat 3 142 0 524 349 51 14 chr2 230956227 230956442 -19731412 - MIR SINE MIR -19 243 21 261 238 48 0 chr2 230957053 230957116 -19730738 + L2 LINE L2 3245 3310 -3 1181 84 0 0 chr2 230958877 230959020 -19728834 + AluSp/q SINE Alu 154 296 -17 21 71 0 0 chr2 230959061 230959103 -19728751 + AT_rich Low_complexity Low_complexity 1 42 0 551 218 24 60 chr2 230959118 230959366 -19728488 - HAL1 LINE L1 -24 2483 2245 318 341 8 0 chr2 230959844 230959976 -19727878 - HAL1 LINE L1 -1602 905 773 464 237 42 116 chr2 230960165 230960355 -19727499 + MIR SINE MIR 12 187 -75 2099 133 0 3 chr2 230961382 230961683 -19726171 + AluSx SINE Alu 1 300 -12 25 31 0 0 chr2 230961729 230961761 -19726093 + AT_rich Low_complexity Low_complexity 1 32 0 209 215 0 15 chr2 230962287 230962352 -19725502 + (TTATA)n Simple_repeat Simple_repeat 4 67 0 232 392 100 0 chr2 230962640 230962770 -19725084 + L2 LINE L2 3122 3264 -8 279 285 62 31 chr2 230964162 230964292 -19723562 + MIR3 SINE MIR 3 136 -72 414 292 40 70 chr2 230964471 230964482 -19723372 + MLT1K LTR MaLR 321 331 -257 2055 172 13 18 chr2 230964482 230964872 -19722982 - MLT1B LTR MaLR 0 390 3 414 292 40 70 chr2 230964872 230965130 -19722724 + MLT1K LTR MaLR 331 558 -30 501 95 0 0 chr2 230965276 230965350 -19722504 + L1PB4 LINE L1 5712 5785 -371 2182 181 24 2 chr2 230965350 230965756 -19722098 + L1PB4 LINE L1 5725 6152 -4 2540 126 0 5 chr2 230965771 230966161 -19721693 + L1PB4 LINE L1 5769 6156 0 1229 219 65 31 chr2 230966193 230966576 -19721278 - HsTC2 DNA Tc2 -16 1882 1311 803 172 15 0 chr2 230966750 230966884 -19720970 - AluSg/x SINE Alu -20 290 155 22 0 0 0 chr2 230966943 230966965 -19720889 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 230967606 230967635 -19720219 + AT_rich Low_complexity Low_complexity 1 29 0 473 259 22 7 chr2 230968599 230968734 -19719120 + MIR SINE MIR 19 155 -107 700 239 35 18 chr2 230968888 230969156 -19718698 + LTR16C LTR ERVL 159 491 0 397 333 74 0 chr2 230969933 230970095 -19717759 + MIR SINE MIR 7 180 -82 216 141 0 47 chr2 230970639 230970703 -19717151 + (TTTTC)n Simple_repeat Simple_repeat 5 65 0 492 143 0 0 chr2 230970725 230970809 -19717045 + (TC)n Simple_repeat Simple_repeat 2 85 0 2192 114 16 3 chr2 230970895 230971201 -19716653 + AluSx SINE Alu 3 312 0 366 331 25 8 chr2 230972162 230972283 -19715571 + MER5B DNA MER1_type 56 178 0 468 253 158 25 chr2 230972568 230972726 -19715128 + MER5A DNA MER1_type 11 189 0 589 252 42 84 chr2 230972912 230972977 -19714877 - MIR SINE MIR -11 251 185 2045 132 4 0 chr2 230972977 230973296 -19714558 + AluSx SINE Alu 1 320 0 589 252 42 84 chr2 230973296 230973443 -19714411 - MIR SINE MIR -77 185 47 534 227 129 15 chr2 230973890 230974022 -19713832 + MIR SINE MIR 5 151 -111 2173 68 4 0 chr2 230974133 230974398 -19713456 - AluSc SINE Alu -28 281 16 228 67 0 0 chr2 230975187 230975217 -19712637 + (TC)n Simple_repeat Simple_repeat 1 30 0 2192 122 7 0 chr2 230975217 230975513 -19712341 - AluSx SINE Alu -14 298 1 2196 66 25 0 chr2 230975638 230975924 -19711930 + AluY SINE Alu 4 296 -15 205 324 59 29 chr2 230975992 230976094 -19711760 + MIR SINE MIR 23 127 -81 3937 192 72 0 chr2 230976837 230977316 -19710538 - MER6 DNA MER2_type 0 865 422 246 32 0 0 chr2 230977316 230977347 -19710507 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 3937 192 72 0 chr2 230977347 230977455 -19710399 - MER6 DNA MER2_type -443 422 323 330 115 0 0 chr2 230977455 230977507 -19710347 + (CA)n Simple_repeat Simple_repeat 2 53 0 3937 192 72 0 chr2 230977507 230977725 -19710129 - MER6 DNA MER2_type -542 323 1 31 26 0 0 chr2 230978062 230978100 -19709754 + AT_rich Low_complexity Low_complexity 1 38 0 908 249 79 22 chr2 230978233 230978702 -19709152 + HsTC2a DNA Tc2 3 549 -193 2150 126 0 0 chr2 230978709 230979002 -19708852 + AluSx SINE Alu 1 293 -19 189 74 0 0 chr2 230979011 230979038 -19708816 + (TA)n Simple_repeat Simple_repeat 2 28 0 22 35 0 0 chr2 230979847 230979876 -19707978 + AT_rich Low_complexity Low_complexity 1 29 0 991 282 74 55 chr2 230980242 230980466 -19707388 - L2 LINE L2 -8 3305 3087 2337 96 0 10 chr2 230980466 230980778 -19707076 - AluSg SINE Alu 0 310 2 991 282 74 55 chr2 230980778 230981066 -19706788 - L2 LINE L2 -226 3087 2785 351 304 56 37 chr2 230981105 230981266 -19706588 + L2 LINE L2 2898 3061 -252 414 312 184 18 chr2 230981662 230981999 -19705855 + MLT1K LTR MaLR 188 580 -8 2496 196 40 8 chr2 230982695 230983216 -19704638 + L1MB2 LINE L1 5625 6162 -9 2237 119 0 3 chr2 230983218 230983521 -19704333 - AluSg SINE Alu -8 302 1 219 200 44 0 chr2 230983555 230983600 -19704254 + (CAAAG)n Simple_repeat Simple_repeat 2 48 0 680 189 84 0 chr2 230983754 230983897 -19703957 + MER58B DNA MER1_type 181 335 -6 1380 156 11 33 chr2 230983903 230984006 -19703848 + MLT1B LTR MaLR 6 110 -280 4941 99 0 17 chr2 230984006 230984730 -19703124 + L1PA13 LINE L1 5450 6161 -2 1380 156 11 33 chr2 230984730 230984896 -19702958 + MLT1B LTR MaLR 110 269 -121 3666 41 2 11 chr2 230984898 230985359 -19702495 + L1PA5 LINE L1 5698 6154 0 760 147 16 0 chr2 230985381 230985510 -19702344 + MLT1B LTR MaLR 260 390 0 681 225 109 73 chr2 230985760 230986156 -19701698 + MLT1C LTR MaLR 6 415 -52 180 0 0 0 chr2 230986164 230986184 -19701670 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1959 151 3 0 chr2 230986186 230986477 -19701377 - AluJb SINE Alu -20 292 1 1822 156 40 30 chr2 230986795 230987166 -19700688 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr2 230987455 230987476 -19700378 + AT_rich Low_complexity Low_complexity 1 21 0 3851 36 4 2 chr2 230987686 230988154 -19699700 - L1PA4 LINE L1 -2 6153 5685 1635 205 26 0 chr2 230988170 230988472 -19699382 + AluJb SINE Alu 1 310 -2 443 323 73 12 chr2 230988515 230988679 -19699175 - MIR SINE MIR -70 192 19 265 80 0 100 chr2 230988687 230988737 -19699117 + MADE1 DNA Mariner 36 80 0 2384 98 0 0 chr2 230989739 230990046 -19697808 + AluSc SINE Alu 1 307 -2 1932 103 130 17 chr2 230992088 230992389 -19695465 + MER1B DNA MER1_type 1 335 -2 718 296 81 43 chr2 230992658 230993029 -19694825 - MLT1J LTR MaLR -111 400 16 3049 293 160 24 chr2 230993251 230993748 -19694106 - L2 LINE L2 -68 3245 2817 277 30 15 75 chr2 230993748 230993815 -19694039 + (TTTTA)n Simple_repeat Simple_repeat 4 66 0 1904 18 0 0 chr2 230993815 230994034 -19693820 - L1PA2 LINE L1 -13 6142 5924 3049 293 160 24 chr2 230994034 230995244 -19692610 - L2 LINE L2 -495 2818 1290 7914 132 13 23 chr2 230995447 230996758 -19691096 + HSMAR2 DNA Mariner 3 1300 -2 507 224 19 9 chr2 230997512 230997619 -19690235 - L2 LINE L2 0 3313 3206 222 91 0 0 chr2 230997740 230997773 -19690081 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 266 332 195 11 chr2 230997901 230998091 -19689763 + L3 LINE CR1 1350 1574 -3 209 275 50 25 chr2 230999631 230999711 -19688143 - L2 LINE L2 -649 2665 2584 2700 86 29 13 chr2 230999764 231000149 -19687705 + L1PA11 LINE L1 5779 6169 -5 323 246 187 15 chr2 231000355 231000489 -19687365 - L2 LINE L2 -4 3309 3153 970 266 46 44 chr2 231000790 231001420 -19686434 + L1ME3A LINE L1 4853 5487 -743 2340 116 0 0 chr2 231001422 231001732 -19686122 + AluSx SINE Alu 1 310 -2 478 286 42 9 chr2 231001744 231001957 -19685897 + L1ME3A LINE L1 5777 5996 -174 411 239 0 18 chr2 231001965 231002086 -19685768 + L1ME3A LINE L1 6043 6162 -2 4090 157 12 32 chr2 231003204 231003925 -19683929 - MER50 LTR ERV1 -23 711 5 182 278 93 0 chr2 231004002 231004056 -19683798 + MER5A DNA MER1_type 10 68 -121 2003 77 32 9 chr2 231004335 231004678 -19683176 - LTR7 LTR ERV1 -10 440 1 2332 104 50 13 chr2 231004678 231005054 -19682800 - HERVH LTR ERV1 0 7713 7324 1451 125 19 0 chr2 231005054 231005270 -19682584 - HERVH LTR ERV1 -1894 5819 5600 4607 128 0 1 chr2 231005271 231005934 -19681920 - HERVH LTR ERV1 -2564 5149 4488 25676 82 67 34 chr2 231005936 231006076 -19681778 - HERVH LTR ERV1 -3720 3993 3859 470 71 43 0 chr2 231006076 231006146 -19681708 + LTR5 LTR ERVK 1 73 -896 6650 89 5 2 chr2 231006146 231006999 -19680855 + LTR5 LTR ERVK 115 969 0 25676 82 67 34 chr2 231006999 231010655 -19677199 - HERVH LTR ERV1 -3853 3860 1 2619 82 119 10 chr2 231010657 231011061 -19676793 - LTR7 LTR ERV1 -2 448 1 22 56 0 0 chr2 231011211 231011247 -19676607 + AT_rich Low_complexity Low_complexity 1 36 0 673 247 12 12 chr2 231011261 231011431 -19676423 - MIR SINE MIR -86 176 7 375 248 108 23 chr2 231011512 231011641 -19676213 - Charlie8 DNA MER1_type -2271 146 7 3913 98 17 0 chr2 231012347 231012890 -19674964 - MER41A LTR ERV1 -2 552 1 200 350 65 23 chr2 231012904 231013118 -19674736 + L2 LINE L2 2385 2607 -707 3829 59 9 0 chr2 231013410 231014214 -19673640 + L1P3 LINE L1 4916 5724 -430 3947 43 2 12 chr2 231014314 231014805 -19673049 + L1PA7 LINE L1 5668 6153 -1 312 297 9 27 chr2 231015422 231015533 -19672321 + L2 LINE L2 3160 3268 -4 459 0 0 0 chr2 231015533 231015584 -19672270 + (GGAA)n Simple_repeat Simple_repeat 2 52 0 200 86 29 0 chr2 231016175 231016210 -19671644 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 986 186 0 6 chr2 231066972 231067183 -19620671 + AluSg/x SINE Alu 109 318 0 3275 120 49 13 chr2 231067183 231067717 -19620137 + L1PA15 LINE L1 5605 6157 -8 1575 144 28 37 chr2 231067719 231068045 -19619809 + L1MC1 LINE L1 5820 6142 -191 1914 190 9 5 chr2 231068145 231068581 -19619273 + L1M2 LINE L1 2559 2995 -3853 481 72 0 108 chr2 231068582 231068665 -19619189 + MADE1 DNA Mariner 1 74 -6 323 85 0 0 chr2 231068668 231068715 -19619139 - MADE1 DNA Mariner -30 50 4 2115 233 23 0 chr2 231068722 231069195 -19618659 + L1M2 LINE L1 2999 3482 -3366 * 4046 34 14 0 chr2 231069187 231069692 -19618162 - L1P LINE L1 -1314 4832 4321 1489 75 19 14 chr2 231069692 231069888 -19617966 + L1PA5 LINE L1 5941 6153 -1 1360 191 14 45 chr2 231069891 231070038 -19617816 + L1M2 LINE L1 3473 3623 -3225 1670 122 0 0 chr2 231070038 231070267 -19617587 + AluSg/x SINE Alu 82 310 0 1360 191 14 45 chr2 231070267 231070475 -19617379 + L1M2 LINE L1 3623 3817 -3031 1324 70 123 44 chr2 231070575 231070802 -19617052 + AluY SINE Alu 62 306 -5 1385 137 12 12 chr2 231070803 231071044 -19616810 + HERVL-A2 LTR ERVL 5414 5654 0 1787 175 60 39 chr2 231071044 231071588 -19616266 + MLT2A2 LTR ERVL 1 554 0 2430 142 34 14 chr2 231073106 231073522 -19614332 - MSTC LTR MaLR -4 424 1 1326 223 184 27 chr2 231073628 231074022 -19613832 + MLT2B2 LTR ERVL 1 474 -41 524 15 15 0 chr2 231074022 231074087 -19613767 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 1326 223 184 27 chr2 231074087 231074137 -19613717 + MLT2B2 LTR ERVL 474 515 0 2394 126 8 5 chr2 231075067 231075441 -19612413 - THE1C LTR MaLR 0 375 1 193 326 0 0 chr2 231075531 231075580 -19612274 - L2 LINE L2 -40 3273 3225 1279 268 159 31 chr2 231075585 231076137 -19611717 - L2 LINE L2 -821 2493 1871 604 279 70 9 chr2 231076533 231076762 -19611092 - L2 LINE L2 -1444 1870 1628 28 48 0 0 chr2 231076975 231077017 -19610837 + AT_rich Low_complexity Low_complexity 1 42 0 7988 182 45 24 chr2 231077720 231079540 -19608314 + L1MA4A LINE L1 2896 4753 -1393 4789 146 21 14 chr2 231079540 231080392 -19607462 + L1MA4A LINE L1 5444 6301 -2 543 125 11 0 chr2 231080561 231080649 -19607205 - L1MC1 LINE L1 -194 6139 6051 324 111 0 0 chr2 231080648 231080693 -19607161 + L1MC1 LINE L1 6147 6191 -142 * 523 268 31 16 chr2 231080704 231080898 -19606956 - L1ME LINE L1 -385 5736 5540 337 270 59 7 chr2 231080920 231081072 -19606782 - L1ME LINE L1 -2330 5478 5319 216 0 0 0 chr2 231081279 231081303 -19606551 + (T)n Simple_repeat Simple_repeat 1 24 0 334 82 41 0 chr2 231081657 231081706 -19606148 - MLT2B1 LTR ERVL 0 520 470 29 28 0 0 chr2 231081723 231081759 -19606095 + AT_rich Low_complexity Low_complexity 1 36 0 1851 201 24 26 chr2 231081763 231082206 -19605648 - MLT2B1 LTR ERVL -30 485 1 189 0 0 0 chr2 231082979 231083000 -19604854 + (A)n Simple_repeat Simple_repeat 1 21 0 343 212 35 0 chr2 231084005 231084090 -19603764 + MER113 DNA MER1_type? 161 248 -273 1408 254 63 14 chr2 231084099 231084540 -19603314 + L1ME3 LINE L1 5691 6153 -9 699 220 91 14 chr2 231084585 231084794 -19603060 + MER113 DNA MER1_type? 241 465 -56 453 274 80 0 chr2 231085648 231085761 -19602093 + L2 LINE L2 3192 3313 0 413 36 18 0 chr2 231086852 231086907 -19600947 + (TTCCC)n Simple_repeat Simple_repeat 5 60 0 259 253 35 82 chr2 231087231 231087401 -19600453 - MER104 DNA Tc2 -17 163 2 994 186 57 5 chr2 231088731 231088925 -19598929 + MER20 DNA MER1_type 16 219 0 268 206 32 0 chr2 231089096 231089159 -19598695 - MIR SINE MIR -15 247 183 5553 147 13 8 chr2 231089160 231089922 -19597932 - MER49 LTR ERV1 0 923 154 1019 136 11 147 chr2 231089922 231090187 -19597667 - MER30 DNA MER1_type -1 229 1 5553 147 13 8 chr2 231090187 231090317 -19597537 - MER49 LTR ERV1 -769 154 26 396 162 162 26 chr2 231090835 231090952 -19596902 - MER104 DNA Tc2 -4 176 44 318 240 135 10 chr2 231091122 231091226 -19596628 + L2 LINE L2 3196 3312 -1 3345 316 90 45 chr2 231091715 231093953 -19593901 - L2 LINE L2 -2 3311 932 1595 293 60 19 chr2 231093953 231094523 -19593331 + MLT1E LTR MaLR 1 593 0 3345 316 90 45 chr2 231094523 231094913 -19592941 - L2 LINE L2 -2381 932 561 317 246 179 84 chr2 231095098 231095175 -19592679 + LTR67 LTR ERVL 244 312 -245 2373 94 0 0 chr2 231095175 231095472 -19592382 + AluSc SINE Alu 1 297 -12 317 246 179 84 chr2 231095472 231095679 -19592175 + LTR67 LTR ERVL 312 555 -2 260 253 48 12 chr2 231096076 231096159 -19591695 + L1ME4a LINE L1 6008 6093 -28 1733 136 7 27 chr2 231096204 231096499 -19591355 - L1PA16 LINE L1 -2 6164 5876 576 111 0 0 chr2 231099011 231099101 -19588753 + (TTCC)n Simple_repeat Simple_repeat 4 93 0 306 335 66 33 chr2 231099355 231099507 -19588347 - HAL1 LINE L1 -924 1583 1427 260 343 75 7 chr2 231101590 231101736 -19586118 + L2 LINE L2 2219 2374 -940 1116 257 113 39 chr2 231101737 231102169 -19585685 + MLT1C LTR MaLR 4 467 0 923 290 123 64 chr2 231102172 231102295 -19585559 + L2 LINE L2 2369 2483 -830 2361 180 20 7 chr2 231102295 231102733 -19585121 + L1PA16 LINE L1 5721 6164 -2 923 290 123 64 chr2 231102733 231103294 -19584560 + L2 LINE L2 2483 3105 -208 1790 135 103 0 chr2 231103294 231103576 -19584278 + AluSx SINE Alu 1 311 -1 923 290 123 64 chr2 231103576 231103793 -19584061 + L2 LINE L2 3105 3308 -5 1597 99 2 5 chr2 231104630 231104876 -19582978 + L1PA16 LINE L1 5687 5936 -230 2357 102 3 0 chr2 231105564 231105869 -19581985 + AluSp SINE Alu 1 306 -7 189 0 0 0 chr2 231105988 231106009 -19581845 + (CTTA)n Simple_repeat Simple_repeat 4 24 0 329 82 33 0 chr2 231106026 231106087 -19581767 + (TCTCTG)n Simple_repeat Simple_repeat 2 64 0 360 0 0 0 chr2 231106271 231106311 -19581543 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 835 66 0 0 chr2 231106313 231106419 -19581435 - L1PA8 LINE L1 -18 6154 6049 699 281 115 53 chr2 231106841 231107240 -19580614 + L3 LINE CR1 1128 1551 -26 1784 144 25 4 chr2 231107291 231107568 -19580286 - AluSx SINE Alu -29 283 1 536 252 150 35 chr2 231107804 231108030 -19579824 + MIR SINE MIR 10 261 -1 288 342 40 44 chr2 231108196 231108424 -19579430 - L2 LINE L2 -179 3093 2867 3094 118 27 0 chr2 231108590 231109032 -19578822 - MER1A DNA MER1_type 0 529 76 26 0 0 0 chr2 231109631 231109657 -19578197 + AT_rich Low_complexity Low_complexity 1 26 0 19598 151 9 12 chr2 231109657 231114069 -19573785 - L1PA11 LINE L1 -1 7611 3216 4702 246 19 17 chr2 231114086 231115194 -19572660 - L1PA11 LINE L1 -6470 1111 2 487 291 98 26 chr2 231115695 231115929 -19571925 + MIR SINE MIR 12 262 0 361 203 0 0 chr2 231116550 231116619 -19571235 + MER94 DNA DNA 3 71 -63 1826 175 20 10 chr2 231116635 231116938 -19570916 - 7SLRNA srpRNA srpRNA -14 306 1 1594 253 47 16 chr2 231117395 231117976 -19569878 + MER114 LTR ERV 46 644 -4 2261 107 13 0 chr2 231120042 231120350 -19567504 - AluSx SINE Alu 0 312 1 773 21 0 10 chr2 231121236 231121332 -19566522 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 779 256 51 5 chr2 231121434 231121701 -19566153 - L1ME1 LINE L1 -1 6165 5884 1510 262 71 32 chr2 231121738 231122300 -19565554 - L1ME3A LINE L1 -28 6560 5977 281 316 41 0 chr2 231122373 231122471 -19565383 - L1ME3A LINE L1 -573 6015 5914 282 267 86 52 chr2 231122480 231122690 -19565164 - L1ME3A LINE L1 -1748 4816 4600 722 214 131 0 chr2 231122763 231122969 -19564885 - L1MA9 LINE L1 0 6312 6080 249 286 19 19 chr2 231122964 231123069 -19564785 - L1ME3A LINE L1 -2060 4504 4400 * 316 308 23 8 chr2 231123164 231123297 -19564557 - L1ME3A LINE L1 -4612 2133 1999 4189 166 68 27 chr2 231123311 231124346 -19563508 - L1MB4 LINE L1 0 6180 5101 416 281 99 33 chr2 231124347 231124983 -19562871 - L1ME LINE L1 -4761 1984 1270 245 122 0 0 chr2 231125142 231125183 -19562671 - L1ME LINE L1 -5070 975 935 17507 127 10 20 chr2 231125381 231128179 -19559675 - L1P LINE L1 -3364 2782 11 1720 260 54 14 chr2 231129778 231130221 -19557633 + MLT1E LTR MaLR 1 461 -132 801 31 0 0 chr2 231130894 231130990 -19556864 + (CAATT)n Simple_repeat Simple_repeat 3 98 0 202 338 12 38 chr2 231130990 231131070 -19556784 - L2 LINE L2 -16 3297 3220 1951 125 43 0 chr2 231131128 231131407 -19556447 - AluSg SINE Alu -19 291 1 520 331 60 28 chr2 231131464 231131882 -19555972 - L2 LINE L2 -194 3119 2686 513 207 83 33 chr2 231132471 231132592 -19555262 - MLT1E LTR MaLR 0 593 467 207 171 0 0 chr2 231133175 231133210 -19554644 + (CA)n Simple_repeat Simple_repeat 2 36 0 1893 169 127 28 chr2 231133336 231133761 -19554093 - MLT1C LTR MaLR 0 467 1 808 29 10 0 chr2 231133963 231134065 -19553789 - L1PA5 LINE L1 0 6154 6052 2240 209 10 42 chr2 231134146 231134338 -19553516 + MLT1D LTR MaLR 1 198 -307 2344 115 0 0 chr2 231134338 231134650 -19553204 + AluSq SINE Alu 1 312 -1 2240 209 10 42 chr2 231134650 231134979 -19552875 + MLT1D LTR MaLR 198 505 0 22 0 0 0 chr2 231135049 231135071 -19552783 + AT_rich Low_complexity Low_complexity 1 22 0 2290 110 0 3 chr2 231135304 231135612 -19552242 - AluSx SINE Alu -5 307 1 25 0 0 0 chr2 231136628 231136653 -19551201 + AT_rich Low_complexity Low_complexity 1 25 0 1385 277 126 13 chr2 231136891 231137615 -19550239 + L2 LINE L2 2403 3189 -124 323 305 119 0 chr2 231137604 231137755 -19550099 + L2 LINE L2 2464 2632 -682 * 24 32 0 0 chr2 231137807 231137838 -19550016 + AT_rich Low_complexity Low_complexity 1 31 0 273 198 32 40 chr2 231137908 231138034 -19549820 + (TTATA)n Simple_repeat Simple_repeat 2 126 0 691 264 6 6 chr2 231138035 231138198 -19549656 + L2 LINE L2 3147 3309 -4 561 262 54 108 chr2 231138699 231138997 -19548857 + MLT1G LTR MaLR 260 589 -1 249 326 10 10 chr2 231139085 231139183 -19548671 + (TATATG)n Simple_repeat Simple_repeat 4 101 0 1922 149 15 59 chr2 231140819 231141209 -19546645 - THE1C LTR MaLR 0 375 3 456 301 56 21 chr2 231141212 231141498 -19546356 - L1ME4a LINE L1 -218 5903 5608 1099 263 63 50 chr2 231142078 231142535 -19545319 - LTR16B LTR ERVL 0 464 2 302 354 55 42 chr2 231142671 231142908 -19544946 + MIR SINE MIR 17 256 -6 215 254 17 17 chr2 231143342 231143401 -19544453 + MER5B DNA MER1_type 100 158 -20 1450 90 146 9 chr2 231143521 231143777 -19544077 - AluSg1 SINE Alu 0 324 40 337 274 59 39 chr2 231145560 231145713 -19542141 - MIR SINE MIR -1 261 106 5913 170 44 17 chr2 231146222 231147877 -19539977 - L1MA4A LINE L1 -1 6302 4597 425 231 47 7 chr2 231148021 231148167 -19539687 - L1MA10 LINE L1 -3 6331 6161 454 227 39 45 chr2 231148608 231148762 -19539092 + L1ME4a LINE L1 5968 6120 -1 21 0 0 0 chr2 231149181 231149202 -19538652 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 231149488 231149509 -19538345 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr2 231150463 231150511 -19537343 + AT_rich Low_complexity Low_complexity 1 48 0 362 283 51 29 chr2 231150754 231150892 -19536962 - MIR SINE MIR -114 148 8 23 0 0 0 chr2 231151375 231151398 -19536456 + AT_rich Low_complexity Low_complexity 1 23 0 2194 154 33 0 chr2 231151751 231152140 -19535714 - MER57A LTR ERV1 0 403 2 1816 192 44 12 chr2 231152350 231152762 -19535092 + LTR56 LTR ERV1 1 425 -20 486 169 0 0 chr2 231152766 231152855 -19534999 + GA-rich Low_complexity Low_complexity 2 90 0 256 278 0 0 chr2 231152855 231152927 -19534927 + A-rich Low_complexity Low_complexity 1 72 0 7269 141 43 11 chr2 231153347 231154585 -19533269 - MER52C LTR ERV1 0 1278 1 852 185 43 25 chr2 231155309 231155471 -19532383 - FRAM SINE Alu -17 159 1 247 286 57 0 chr2 231155471 231155541 -19532313 - L2 LINE L2 -13 3300 3227 286 377 8 15 chr2 231155723 231155853 -19532001 - L3 LINE CR1 -394 1183 1055 1034 234 54 25 chr2 231155853 231156259 -19531595 - Charlie2 DNA MER1_type -17 2845 2428 222 194 0 0 chr2 231156262 231156334 -19531520 + (TA)n Simple_repeat Simple_repeat 1 72 0 29241 114 10 62 chr2 231156334 231162813 -19525041 - L1PA7 LINE L1 -12 6142 13 406 320 51 31 chr2 231163160 231163416 -19524438 - Charlie2 DNA MER1_type -2518 264 4 584 354 85 22 chr2 231163420 231163739 -19524115 - L3 LINE CR1 -508 1069 731 274 300 62 0 chr2 231163944 231164024 -19523830 - L2 LINE L2 0 3272 3188 1772 186 42 35 chr2 231164660 231165205 -19522649 + MLT2A2 LTR ERVL 1 554 0 37057 101 11 4 chr2 231165205 231170590 -19517264 + HERVL-A2 LTR ERVL 1 5424 -230 822 62 0 0 chr2 231170590 231170687 -19517167 + AluY SINE Alu 1 97 -214 1326 102 6 0 chr2 231170787 231170963 -19516891 + AluSg/x SINE Alu 121 297 -15 327 355 19 9 chr2 231171115 231171329 -19516525 - LTR33 LTR ERVL -14 507 292 2052 133 0 23 chr2 231173120 231173428 -19514426 - AluSx SINE Alu -11 301 1 23 0 0 0 chr2 231174354 231174377 -19513477 + AT_rich Low_complexity Low_complexity 1 23 0 739 354 43 12 chr2 231174622 231174950 -19512904 - MLT1K LTR MaLR -220 368 31 2089 127 3 0 chr2 231175659 231175951 -19511903 + AluSx SINE Alu 1 293 -19 183 313 0 78 chr2 231175978 231176042 -19511812 + L2 LINE L2 3214 3272 0 23 33 0 0 chr2 231176203 231176233 -19511621 + AT_rich Low_complexity Low_complexity 1 30 0 1080 279 71 10 chr2 231177737 231178217 -19509637 + MER113 DNA MER1_type? 1 509 -12 1450 94 5 0 chr2 231178246 231178437 -19509417 + L1PA8 LINE L1 5968 6159 -13 233 226 10 147 chr2 231178648 231178750 -19509104 - L2 LINE L2 -1 3271 3184 200 333 24 24 chr2 231179182 231179266 -19508588 - MIR SINE MIR -21 241 158 1738 244 114 14 chr2 231179266 231179819 -19508035 - MLT1E2 LTR MaLR 0 626 19 201 315 45 34 chr2 231180347 231180436 -19507418 + L2 LINE L2 3139 3228 -44 322 210 0 118 chr2 231180481 231180600 -19507254 + MLT1E3 LTR MaLR 520 624 0 1915 157 0 17 chr2 231181807 231182101 -19505753 - AluJo SINE Alu -22 290 2 2023 144 7 0 chr2 231182106 231182397 -19505457 - AluSg SINE Alu -10 300 8 442 147 0 0 chr2 231183047 231183115 -19504739 - tRNA-Lys-AAA tRNA tRNA -4 72 5 1464 199 26 46 chr2 231183191 231183473 -19504381 + AluJb SINE Alu 3 280 -32 8015 32 8 0 chr2 231183473 231185216 -19502638 + L1PA4 LINE L1 4407 6155 0 1464 199 26 46 chr2 231185216 231185239 -19502615 + AluJb SINE Alu 280 302 -10 303 333 0 0 chr2 231185371 231185461 -19502393 - L1MC4 LINE L1 -1339 6703 6614 * 330 284 23 0 chr2 231185387 231185475 -19502379 + L1MC4 LINE L1 6614 6703 -1339 297 165 0 82 chr2 231185509 231185594 -19502260 + MER96B DNA MER1_type? 155 232 -185 684 275 61 12 chr2 231185992 231186239 -19501615 + MIR SINE MIR 2 260 -2 260 336 86 8 chr2 231186241 231186369 -19501485 - MIR SINE MIR -73 189 52 180 229 29 0 chr2 231186849 231186884 -19500970 + L2 LINE L2 3160 3195 -77 3074 171 27 14 chr2 231187430 231188055 -19499799 - L1MB5 LINE L1 0 6174 5542 2182 100 17 0 chr2 231188108 231188399 -19499455 + AluSq SINE Alu 1 296 -17 324 0 0 0 chr2 231189072 231189108 -19498746 + (CA)n Simple_repeat Simple_repeat 2 37 0 2286 110 3 3 chr2 231189457 231189756 -19498098 - AluSg SINE Alu -11 299 1 972 280 99 23 chr2 231189852 231190433 -19497421 + Charlie2 DNA MER1_type 3 644 -2138 1071 218 99 7 chr2 231190505 231190808 -19497046 + Charlie2a DNA MER1_type 1466 1796 -1066 772 247 89 61 chr2 231191064 231191225 -19496629 + Charlie2a DNA MER1_type 1796 1951 -911 2218 109 0 0 chr2 231191225 231191518 -19496336 - AluSg SINE Alu -17 293 1 772 247 89 61 chr2 231191518 231191818 -19496036 + Charlie2a DNA MER1_type 1951 2270 -592 960 96 0 8 chr2 231191818 231191943 -19495911 + AluSq SINE Alu 1 124 -188 35720 90 7 7 chr2 231191965 231198101 -19489753 + L1PA6 LINE L1 11 6142 -12 1199 106 6 17 chr2 231198105 231198284 -19489570 + AluSq SINE Alu 121 297 -16 739 264 46 11 chr2 231198352 231198700 -19489154 + Charlie2a DNA MER1_type 2304 2663 -199 194 281 140 18 chr2 231198890 231199004 -19488850 - MIR SINE MIR -62 146 19 530 327 34 6 chr2 231199246 231199440 -19488414 + MIR SINE MIR 34 231 -31 306 0 0 0 chr2 231201049 231201083 -19486771 + (TG)n Simple_repeat Simple_repeat 1 34 0 526 291 78 62 chr2 231201409 231201780 -19486074 - LTR33 LTR ERVL -2 519 143 244 254 0 0 chr2 231202082 231202145 -19485709 - MIR SINE MIR -109 153 91 1721 191 3 37 chr2 231202769 231202861 -19484993 + MER2 DNA MER2_type 6 100 -245 2042 136 7 0 chr2 231202861 231203141 -19484713 + AluSx SINE Alu 1 285 -27 297 0 0 0 chr2 231203141 231203174 -19484680 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 2042 136 7 0 chr2 231203174 231203194 -19484660 + AluSx SINE Alu 285 303 -9 1721 191 3 37 chr2 231203194 231203452 -19484402 + MER2 DNA MER2_type 100 344 -1 31 0 0 0 chr2 231204698 231204729 -19483125 + AT_rich Low_complexity Low_complexity 1 31 0 8509 45 2 0 chr2 231205158 231206261 -19481593 - L1PA5 LINE L1 -926 5220 4116 7304 36 5 0 chr2 231206260 231207182 -19480672 + L1PA5 LINE L1 5217 6142 -12 23 0 0 0 chr2 231207182 231207205 -19480649 + AT_rich Low_complexity Low_complexity 1 23 0 13729 197 29 15 chr2 231208066 231208460 -19479394 + L1PB3 LINE L1 754 1141 -5070 2240 85 9 41 chr2 231208460 231208776 -19479078 + AluY SINE Alu 1 306 -5 13729 197 29 15 chr2 231208776 231213179 -19474675 + L1PB3 LINE L1 1141 5672 -539 2175 96 0 3 chr2 231213179 231213492 -19474362 + AluSx SINE Alu 1 312 0 13729 197 29 15 chr2 231213492 231214039 -19473815 + L1PB3 LINE L1 5672 6210 -1 426 293 32 13 chr2 231214818 231214975 -19472879 - MLT1I LTR MaLR 0 409 250 1182 239 29 55 chr2 231215046 231215484 -19472370 - L1MEc LINE L1 -3651 2564 2177 2004 140 31 0 chr2 231215643 231215935 -19471919 + AluSx SINE Alu 1 301 -11 473 295 112 0 chr2 231216031 231216255 -19471599 + L3b LINE CR1 1111 1359 -224 2939 40 0 0 chr2 231216564 231216963 -19470891 - L1P2 LINE L1 -549 5605 5207 3968 33 4 2 chr2 231216963 231217439 -19470415 + L1PA4 LINE L1 5673 6155 0 1758 119 16 4 chr2 231217469 231217720 -19470134 + AluSx SINE Alu 44 297 -15 709 178 22 60 chr2 231217748 231217933 -19469921 + MER53 DNA DNA 9 186 -3 849 251 63 60 chr2 231218329 231218651 -19469203 + MLT1G3 LTR MaLR 6 301 -229 1333 217 106 30 chr2 231218665 231219071 -19468783 + MER31B LTR ERV1 1 437 -29 383 304 139 6 chr2 231219102 231219260 -19468594 + MLT1G3 LTR MaLR 340 518 -24 32 0 0 0 chr2 231219367 231219399 -19468455 + AT_rich Low_complexity Low_complexity 1 32 0 347 346 31 0 chr2 231219576 231219706 -19468148 - MIR SINE MIR -52 210 77 187 282 24 35 chr2 231220027 231220112 -19467742 - MIR SINE MIR -92 116 33 986 187 35 15 chr2 231220404 231220607 -19467247 + MER3 DNA MER1_type 3 209 0 747 205 38 16 chr2 231220942 231221127 -19466727 - MER53 DNA DNA 0 189 1 605 262 32 36 chr2 231221346 231221567 -19466287 - L1ME3A LINE L1 -61 6109 5890 308 309 83 36 chr2 231221863 231222031 -19465823 - L1MEc LINE L1 -5889 316 141 438 256 24 16 chr2 231223144 231223269 -19464585 + L2 LINE L2 3188 3313 0 408 291 30 59 chr2 231223275 231223478 -19464376 - MIR3 SINE MIR -1 207 11 1938 194 14 6 chr2 231224162 231224518 -19463336 + MLT1A1 LTR MaLR 1 359 -6 204 139 28 0 chr2 231224613 231224649 -19463205 + CT-rich Low_complexity Low_complexity 2 38 0 2865 88 19 16 chr2 231224797 231225227 -19462627 + L1MA2 LINE L1 5874 6304 0 402 316 26 26 chr2 231225237 231225389 -19462465 - MIR SINE MIR -83 179 28 381 283 105 0 chr2 231225533 231225685 -19462169 + MIR SINE MIR 91 258 -4 332 279 37 81 chr2 231226347 231226483 -19461371 + L3 LINE CR1 330 459 -1118 625 307 51 67 chr2 231226660 231227093 -19460761 + MLT1J LTR MaLR 83 508 -3 230 341 82 0 chr2 231227331 231227416 -19460438 + L3 LINE CR1 1409 1500 -77 975 136 131 0 chr2 231227422 231227598 -19460256 - MER3 DNA MER1_type -9 200 2 239 106 43 21 chr2 231227613 231227660 -19460194 + MER5A DNA MER1_type 9 56 -133 633 266 114 64 chr2 231228015 231228476 -19459378 - MLT1F LTR MaLR 0 555 70 491 71 0 0 chr2 231228740 231228810 -19459044 + L1PA4 LINE L1 6083 6152 -3 868 228 10 10 chr2 231230325 231230531 -19457323 - LTR37B LTR ERV1 -262 206 1 21 36 0 0 chr2 231230610 231230638 -19457216 + AT_rich Low_complexity Low_complexity 1 28 0 1162 108 0 6 chr2 231231279 231231455 -19456399 - L1PB1 LINE L1 -1 6150 5976 184 267 116 70 chr2 231231925 231232011 -19455843 + L2 LINE L2 3200 3289 -24 1190 130 34 0 chr2 231232100 231232277 -19455577 - AluSc SINE Alu -4 305 123 1031 202 11 73 chr2 231232801 231233088 -19454766 + L1MB8 LINE L1 5837 6105 -73 2806 75 11 8 chr2 231233955 231234329 -19453525 + THE1C LTR MaLR 1 375 0 314 241 9 36 chr2 231234387 231234499 -19453355 + L1ME4a LINE L1 5741 5849 -272 377 269 81 0 chr2 231234520 231234680 -19453174 + L1ME4a LINE L1 5944 6116 -5 1117 171 8 0 chr2 231238624 231238858 -19448996 - L1MA7 LINE L1 0 6291 6056 1335 148 45 8 chr2 231238858 231239102 -19448752 + L1MA7 LINE L1 5798 6050 -241 1198 150 12 81 chr2 231239306 231239552 -19448302 + AluJo SINE Alu 52 280 -32 217 355 0 0 chr2 231239812 231239874 -19447980 + L2 LINE L2 3203 3264 -8 326 339 116 50 chr2 231240411 231240850 -19447004 - L2 LINE L2 -519 2795 2328 759 267 26 59 chr2 231241529 231241832 -19446022 + LOR1-int LTR ERV1 701 993 -3878 573 247 30 20 chr2 231241945 231241969 -19445885 + LOR1-int LTR ERV1 838 860 -926 463 188 59 10 chr2 231241969 231242070 -19445784 + LTR57-int LTR ERVL 646 751 -4592 573 247 30 20 chr2 231242070 231242172 -19445682 + LOR1-int LTR ERV1 860 1224 -562 * 3250 204 54 41 chr2 231242142 231243287 -19444567 + LOR1-int LTR ERV1 1562 2493 -2378 228 67 0 0 chr2 231243297 231243327 -19444527 + (TG)n Simple_repeat Simple_repeat 2 31 0 1795 140 36 14 chr2 231243327 231243605 -19444249 - AluSx SINE Alu -23 289 6 868 213 23 40 chr2 231243670 231243971 -19443883 + LOR1-int LTR ERV1 1746 2041 -6079 215 200 0 59 chr2 231245557 231245642 -19442212 + A-rich Low_complexity Low_complexity 1 80 0 1747 84 0 4 chr2 231246255 231246494 -19441360 + L1PA15 LINE L1 5922 6159 -6 354 277 269 7 chr2 231246555 231246696 -19441158 + MER5B DNA MER1_type 1 178 0 693 272 29 6 chr2 231247081 231247254 -19440600 - MER5B DNA MER1_type -1 177 1 365 209 55 22 chr2 231247570 231247661 -19440193 - L2 LINE L2 0 3272 3179 199 398 0 0 chr2 231247770 231247853 -19440001 - L2 LINE L2 -265 3007 2925 2387 90 3 0 chr2 231248001 231248311 -19439543 + AluSp SINE Alu 1 311 -2 962 212 0 10 chr2 231248337 231248530 -19439324 - MER3 DNA MER1_type 0 209 19 249 347 47 36 chr2 231249283 231249476 -19438378 - L2 LINE L2 -647 2667 2473 398 143 13 0 chr2 231249722 231249799 -19438055 + (TAGA)n Simple_repeat Simple_repeat 2 79 0 1043 283 66 23 chr2 231249804 231250531 -19437323 - L1M4 LINE L1 -1015 5131 4367 1101 211 119 22 chr2 231250541 231250901 -19436953 - L1ME2 LINE L1 -9 6155 5761 332 210 17 47 chr2 231250903 231250998 -19436856 - L1ME2 LINE L1 -592 5570 5475 260 259 83 57 chr2 231251004 231251305 -19436549 - L1M4 LINE L1 -1978 4168 3860 2131 113 0 7 chr2 231251321 231251605 -19436249 + AluSx SINE Alu 1 282 -30 255 79 0 0 chr2 231251605 231251643 -19436211 + (TC)n Simple_repeat Simple_repeat 1 38 0 366 247 0 11 chr2 231251643 231251732 -19436122 - L1MC4 LINE L1 -1340 6702 6615 401 161 11 0 chr2 231251733 231251820 -19436034 + (TA)n Simple_repeat Simple_repeat 2 89 0 4746 137 20 24 chr2 231251826 231252607 -19435247 + MER49 LTR ERV1 1 778 -145 642 139 9 52 chr2 231252707 231252822 -19435032 + MER49 LTR ERV1 806 915 -8 1509 270 97 28 chr2 231252838 231253283 -19434571 - L1M4 LINE L1 -2304 3842 3429 2155 149 86 8 chr2 231253283 231253680 -19434174 - MSTA LTR MaLR 0 428 1 1509 270 97 28 chr2 231253680 231254161 -19433693 - L1M4 LINE L1 -2717 3429 2852 10564 210 65 35 chr2 231254207 231254677 -19433177 - L1MC3 LINE L1 -31 7754 7300 199 0 0 61 chr2 231254677 231254710 -19433144 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2026 135 3 0 chr2 231254713 231255002 -19432852 - AluSx SINE Alu -22 290 1 10564 210 65 35 chr2 231255002 231255091 -19432763 - L1MC3 LINE L1 -486 7299 7214 309 297 0 0 chr2 231255091 231255182 -19432672 - MLT1F1 LTR MaLR -442 125 35 10564 210 65 35 chr2 231255182 231255439 -19432415 - L1MC3 LINE L1 -571 7214 6966 2303 106 3 0 chr2 231255439 231255741 -19432113 - AluSp SINE Alu -10 303 1 10564 210 65 35 chr2 231255741 231260262 -19427592 - L1MC3 LINE L1 -819 6966 2155 322 212 111 78 chr2 231261517 231261823 -19426031 - Charlie7 DNA MER1_type -125 2487 2172 1182 240 114 7 chr2 231261826 231262247 -19425607 - Charlie7 DNA MER1_type -606 2006 1541 320 289 106 21 chr2 231262247 231262389 -19425465 - MIR SINE MIR -28 234 81 764 276 67 15 chr2 231262393 231262661 -19425193 - LTR16A1 LTR ERVL 0 457 176 358 273 13 0 chr2 231262828 231262905 -19424949 - MIR SINE MIR -178 84 7 604 252 89 39 chr2 231262912 231263170 -19424684 - Charlie7 DNA MER1_type -1043 1569 1299 451 289 129 26 chr2 231264083 231264277 -19423577 - MIR SINE MIR 0 262 49 466 87 72 0 chr2 231264340 231264409 -19423445 + MADE1 DNA Mariner 7 80 0 204 125 0 0 chr2 231264821 231264853 -19423001 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 251 223 86 149 chr2 231264985 231265286 -19422568 + MLT1J1-int LTR MaLR 1057 1338 -33 438 344 56 14 chr2 231265640 231265855 -19421999 + MLT1J1 LTR MaLR 71 294 -152 313 401 118 3 chr2 231266117 231266414 -19421440 + L2 LINE L2 2554 2884 -430 233 333 14 0 chr2 231266471 231266540 -19421314 + L2 LINE L2 3014 3083 -189 23 0 0 0 chr2 231266594 231266617 -19421237 + AT_rich Low_complexity Low_complexity 1 23 0 1242 197 9 0 chr2 231266676 231266904 -19420950 + L1MC1 LINE L1 6103 6332 -1 679 297 93 8 chr2 231266989 231267222 -19420632 - LTR33 LTR ERVL -240 281 28 448 275 11 3 chr2 231267222 231267393 -19420461 - MER58B DNA MER1_type -1 340 1 1357 279 50 14 chr2 231267469 231267970 -19419884 - L1MC/D LINE L1 -2036 5772 5254 1722 117 60 104 chr2 231268256 231268604 -19419250 + THE1C LTR MaLR 3 332 -96 5893 61 1 0 chr2 231268604 231269342 -19418512 + L1PA6 LINE L1 5405 6143 -11 1722 117 60 104 chr2 231269342 231269435 -19418419 + THE1C LTR MaLR 332 428 0 358 324 56 65 chr2 231270001 231270325 -19417529 - L2 LINE L2 -2290 1024 704 339 330 0 0 chr2 231270353 231270441 -19417413 + MIR SINE MIR 62 149 -113 200 329 38 13 chr2 231272075 231272154 -19415700 + MIR SINE MIR 48 128 -134 389 342 48 26 chr2 231272347 231272619 -19415235 + MLT1J LTR MaLR 234 511 0 220 302 170 53 chr2 231272827 231273313 -19414541 + L2 LINE L2 2449 3291 -22 781 258 104 5 chr2 231273316 231273537 -19414317 - MIR SINE MIR -5 257 15 239 203 14 0 chr2 231273734 231273808 -19414046 + (TA)n Simple_repeat Simple_repeat 1 75 0 250 210 0 0 chr2 231273808 231273870 -19413984 - L1MC4 LINE L1 -1339 6703 6642 409 271 8 17 chr2 231274460 231274578 -19413276 - MIR SINE MIR -46 216 100 218 343 126 21 chr2 231275342 231275485 -19412369 + MIR3 SINE MIR 20 177 -31 274 289 77 5 chr2 231276050 231276190 -19411664 - MIR SINE MIR -79 129 35 291 296 10 10 chr2 231276713 231276811 -19411043 + CT-rich Low_complexity Low_complexity 1 98 0 312 304 158 6 chr2 231277161 231277319 -19410535 - MIR3 SINE MIR -6 202 21 2171 128 0 3 chr2 231277395 231277701 -19410153 - AluSq SINE Alu -8 305 1 195 100 0 0 chr2 231278104 231278134 -19409720 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 392 254 148 47 chr2 231278632 231278801 -19409053 - MER5A DNA MER1_type -2 187 2 195 291 70 23 chr2 231278895 231278981 -19408873 - MIR SINE MIR -45 217 128 2375 74 3 0 chr2 231279153 231279452 -19408402 + AluY SINE Alu 1 300 -11 497 340 21 0 chr2 231279453 231279647 -19408207 + MIR SINE MIR 26 223 -39 2541 58 0 0 chr2 231279733 231280044 -19407810 + AluY SINE Alu 1 311 0 21 36 0 0 chr2 231281069 231281097 -19406757 + AT_rich Low_complexity Low_complexity 1 28 0 4018 15 4 0 chr2 231281101 231281562 -19406292 - L1PA2 LINE L1 -5 6150 5688 1391 13 0 0 chr2 231281562 231281717 -19406137 + L1PA2 LINE L1 5529 5683 -472 203 213 0 16 chr2 231281986 231282047 -19405807 + CT-rich Low_complexity Low_complexity 3 62 0 305 314 183 22 chr2 231282126 231282263 -19405591 + MIR3 SINE MIR 29 187 -21 223 277 72 24 chr2 231282546 231282629 -19405225 - L2 LINE L2 0 3313 3227 2534 224 50 50 chr2 231282961 231283208 -19404646 - L1ME2 LINE L1 -9 6089 5843 2401 153 26 12 chr2 231283208 231283627 -19404227 + MSTB LTR MaLR 2 426 0 2534 224 50 50 chr2 231283627 231284138 -19403716 - L1ME2 LINE L1 -255 5843 5328 2144 131 0 0 chr2 231284138 231284435 -19403419 - AluSx SINE Alu -14 298 2 2534 224 50 50 chr2 231284435 231284495 -19403359 - L1ME2 LINE L1 -769 5329 5270 1861 231 111 37 chr2 231284507 231285239 -19402615 - L1ME2 LINE L1 -855 5225 4440 292 342 66 0 chr2 231285263 231285415 -19402439 - L1ME2 LINE L1 -2048 4032 3871 2314 243 87 18 chr2 231285416 231286510 -19401344 - L1ME2 LINE L1 -2892 3188 2039 485 262 75 98 chr2 231286542 231287008 -19400846 - L1ME2 LINE L1 -4210 2051 1605 2554 145 24 5 chr2 231287008 231287428 -19400426 + MSTA LTR MaLR 1 428 0 485 262 75 98 chr2 231287428 231287656 -19400198 - L1ME2 LINE L1 -4656 1605 1373 484 275 14 72 chr2 231287684 231287773 -19400081 - L1ME2 LINE L1 -4975 1105 1012 2018 152 0 0 chr2 231287773 231288070 -19399784 - AluSx SINE Alu -15 297 1 484 275 14 72 chr2 231288070 231288340 -19399514 - L1ME2 LINE L1 -5068 1012 767 * 4912 102 25 25 chr2 231288328 231289114 -19398740 - L1PB1 LINE L1 -2 6149 5364 2576 84 11 3 chr2 231289122 231289477 -19398377 - L1PB1 LINE L1 0 6151 5794 198 48 24 48 chr2 231289478 231289520 -19398334 + (TA)n Simple_repeat Simple_repeat 1 41 0 10143 222 7 32 chr2 231289566 231292827 -19395027 - L1PB1 LINE L1 -470 5681 2510 372 297 36 24 chr2 231292867 231293172 -19394682 - L1ME2 LINE L1 -5285 785 526 200 261 31 15 chr2 231293228 231293293 -19394561 - MIR SINE MIR -58 150 85 277 301 0 55 chr2 231293327 231293392 -19394462 + L2 LINE L2 3026 3093 -220 2336 132 22 0 chr2 231293392 231293748 -19394106 + THE1B LTR MaLR 1 364 0 277 301 0 55 chr2 231293748 231293828 -19394026 + L2 LINE L2 3093 3163 -150 800 298 43 14 chr2 231293855 231294275 -19393579 + L1MEc LINE L1 1430 1861 -4535 457 306 40 24 chr2 231294277 231294401 -19393453 + L2 LINE L2 3188 3313 0 305 238 40 10 chr2 231294764 231294865 -19392989 - MER103 DNA DNA -16 150 47 1741 132 11 11 chr2 231296110 231296376 -19391478 + AluSx SINE Alu 1 266 -46 404 271 120 0 chr2 231297458 231297591 -19390263 - L1ME LINE L1 -415 5706 5558 32 57 0 0 chr2 231297638 231297691 -19390163 + AT_rich Low_complexity Low_complexity 1 53 0 543 276 113 5 chr2 231298201 231298386 -19389468 - MIR SINE MIR -38 224 20 2249 86 7 3 chr2 231299261 231299551 -19388303 + AluSq SINE Alu 2 292 -21 2065 129 3 3 chr2 231301111 231301405 -19386449 + AluSq SINE Alu 7 300 -13 207 0 0 0 chr2 231301748 231301771 -19386083 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 374 133 120 0 chr2 231301775 231301850 -19386004 - L1MC2 LINE L1 -13 6331 6248 1223 141 11 0 chr2 231301891 231302082 -19385772 + AluSx SINE Alu 1 193 -119 3385 17 0 0 chr2 231302183 231302693 -19385161 - L1P1 LINE L1 -513 5642 5133 3318 8 5 3 chr2 231302693 231303076 -19384778 + L1PA2 LINE L1 5771 6155 0 343 213 63 39 chr2 231303558 231303685 -19384169 - L1ME LINE L1 -738 5428 5302 1840 152 6 25 chr2 231303716 231304032 -19383822 - AluJb SINE Alu -1 311 2 428 279 121 36 chr2 231304072 231304264 -19383590 - L1ME LINE L1 -879 5267 5093 2760 102 0 0 chr2 231304264 231304628 -19383226 - THE1B LTR MaLR 0 364 1 428 279 121 36 chr2 231304628 231305015 -19382839 - L1ME LINE L1 -1053 5093 4639 940 178 0 49 chr2 231305127 231305312 -19382542 - MLT1B LTR MaLR -213 177 2 524 289 109 0 chr2 231305313 231305469 -19382385 + MIR SINE MIR 6 178 -84 241 343 120 32 chr2 231305678 231305894 -19381960 - L2 LINE L2 -895 2419 2185 1421 203 30 16 chr2 231306498 231306867 -19380987 + Charlie1 DNA MER1_type 2388 2761 0 477 312 50 45 chr2 231307197 231307399 -19380455 + MIR3 SINE MIR 1 203 -5 319 357 18 0 chr2 231307504 231307616 -19380238 + MIR SINE MIR 10 123 -139 206 349 60 12 chr2 231307728 231307811 -19380043 + L2 LINE L2 3121 3207 -65 736 181 8 0 chr2 231307925 231308058 -19379796 + AluSg/x SINE Alu 148 281 -29 184 42 0 0 chr2 231308058 231308082 -19379772 + (TAAA)n Simple_repeat Simple_repeat 2 120 0 3600 137 19 21 chr2 231308089 231308719 -19379135 - L1PA16 LINE L1 -8 6158 5530 3525 243 48 18 chr2 231308719 231308869 -19378985 - L1MD3 LINE L1 -20 7975 7831 509 78 13 13 chr2 231308869 231308946 -19378908 - MADE1 DNA Mariner 0 80 4 3525 243 48 18 chr2 231308946 231310195 -19377659 - L1MD3 LINE L1 -164 7831 6621 240 35 0 0 chr2 231310195 231310224 -19377630 + (TTCTC)n Simple_repeat Simple_repeat 2 30 0 3525 243 48 18 chr2 231310224 231310868 -19376986 - L1MD3 LINE L1 -1374 6621 4147 2459 77 0 0 chr2 231311369 231311668 -19376186 + AluSq SINE Alu 1 299 -14 533 262 166 9 chr2 231312933 231313162 -19374692 + L2 LINE L2 2222 2486 -828 956 197 3 1 chr2 231313174 231313502 -19374352 + MER93b LTR ERV1 13 373 0 1497 267 94 31 chr2 231313503 231314281 -19373573 + L2 LINE L2 2486 3306 -7 190 288 36 54 chr2 231314271 231314382 -19373472 + MIR SINE MIR 78 186 -76 * 25 0 0 0 chr2 231314830 231314855 -19372999 + AT_rich Low_complexity Low_complexity 1 25 0 35 0 0 0 chr2 231315501 231315536 -19372318 + AT_rich Low_complexity Low_complexity 1 35 0 1671 181 7 3 chr2 231315538 231315826 -19372028 - AluJo SINE Alu -23 289 1 372 94 0 0 chr2 231315832 231315843 -19372011 + (CA)n Simple_repeat Simple_repeat 1 64 0 372 94 0 0 chr2 231315843 231315896 -19371958 + (CA)n Simple_repeat Simple_repeat 2 54 0 528 105 0 13 chr2 231315916 231315992 -19371862 - AluSg/x SINE Alu -21 291 217 2242 107 9 3 chr2 231316043 231316379 -19371475 + THE1B LTR MaLR 1 338 -26 185 267 17 17 chr2 231317387 231317447 -19370407 - MIR SINE MIR -62 146 87 550 270 33 7 chr2 231318357 231318509 -19369345 - MIR SINE MIR -76 186 31 2091 140 0 13 chr2 231320017 231320331 -19367523 + AluSx SINE Alu 1 310 -2 2292 82 0 0 chr2 231320993 231321285 -19366569 - AluSg SINE Alu -18 292 1 576 308 77 21 chr2 231323068 231323302 -19364552 - MIR SINE MIR -5 257 11 452 82 27 0 chr2 231323308 231323381 -19364473 + (CTATA)n Simple_repeat Simple_repeat 2 76 0 2039 140 15 58 chr2 231323556 231323950 -19363904 + MLT1B LTR MaLR 14 390 0 24 32 0 0 chr2 231324004 231324035 -19363819 + AT_rich Low_complexity Low_complexity 1 31 0 1364 181 72 14 chr2 231325093 231325386 -19362468 + AluJo SINE Alu 1 310 -2 297 301 155 24 chr2 231325418 231325714 -19362140 + L1MC4a LINE L1 5609 5943 -1865 313 335 79 56 chr2 231326897 231327252 -19360602 + MLT1I LTR MaLR 47 409 0 466 314 7 7 chr2 231327443 231327583 -19360271 + MER5A DNA MER1_type 50 189 0 23 68 0 0 chr2 231328089 231328133 -19359721 + AT_rich Low_complexity Low_complexity 1 44 0 273 210 31 128 chr2 231330251 231330446 -19357408 + HAL1 LINE L1 106 281 -2226 328 250 69 43 chr2 231330575 231330691 -19357163 + HAL1 LINE L1 499 617 -1890 26 0 0 0 chr2 231330794 231330820 -19357034 + AT_rich Low_complexity Low_complexity 1 26 0 2605 133 24 9 chr2 231331133 231331553 -19356301 + MSTA LTR MaLR 1 426 -2 8216 176 37 13 chr2 231331555 231331854 -19356000 + MSTA-int LTR MaLR 1 291 -1360 2215 140 48 23 chr2 231331854 231332291 -19355563 + LTR7 LTR ERV1 1 448 -2 8216 176 37 13 chr2 231332291 231333603 -19354251 + MSTA-int LTR MaLR 291 1650 -1 2603 138 21 7 chr2 231333612 231334032 -19353822 + MSTA LTR MaLR 3 428 0 2128 198 36 38 chr2 231334182 231334688 -19353166 - MLT1D LTR MaLR 0 505 1 2382 126 22 0 chr2 231334949 231335305 -19352549 + THE1B LTR MaLR 1 364 0 1562 267 64 23 chr2 231335836 231336395 -19351459 - L1ME3A LINE L1 -5 6165 5630 1870 206 67 8 chr2 231336395 231336797 -19351057 - MSTB LTR MaLR 0 426 1 1562 267 64 23 chr2 231336797 231337277 -19350577 - L1ME3A LINE L1 -540 5630 5062 779 145 38 31 chr2 231337522 231337681 -19350173 - L1MA6 LINE L1 0 6300 6141 2676 91 6 3 chr2 231337759 231338122 -19349732 - THE1B LTR MaLR 0 364 1 1082 285 146 15 chr2 231338765 231339245 -19348609 + MLT1H LTR MaLR 1 543 -6 2678 193 10 2 chr2 231340265 231340747 -19347107 - MER66B LTR ERV1 0 486 1 8902 122 53 18 chr2 231340747 231341073 -19346781 - MER66B-int LTR ERV1 0 6676 6363 1599 196 29 0 chr2 231341073 231341349 -19346505 - AluJb SINE Alu 0 312 29 8902 122 53 18 chr2 231341349 231342293 -19345561 - MER66B-int LTR ERV1 -313 6363 5344 2382 140 3 6 chr2 231342293 231342658 -19345196 - THE1B LTR MaLR 0 364 1 8902 122 53 18 chr2 231342658 231342868 -19344986 - MER66B-int LTR ERV1 -1332 5344 5143 4067 211 6 33 chr2 231342864 231343433 -19344421 - MER66B-int LTR ERV1 -3504 3172 2632 * 1872 127 38 14 chr2 231343433 231343724 -19344130 - AluSx SINE Alu -14 298 1 4067 211 6 33 chr2 231343724 231344011 -19343843 - MER66B-int LTR ERV1 -4044 2632 2339 8919 199 43 56 chr2 231344012 231344472 -19343382 - MER66B-int LTR ERV1 -4516 2160 1696 2029 161 0 34 chr2 231344472 231344821 -19343033 + MER1B DNA MER1_type 1 337 0 8919 199 43 56 chr2 231344821 231345796 -19342058 - MER66B-int LTR ERV1 -4980 1696 759 371 0 61 0 chr2 231345796 231345845 -19342009 + (TAAAA)n Simple_repeat Simple_repeat 2 53 0 8919 199 43 56 chr2 231345845 231346595 -19341259 - MER66B-int LTR ERV1 -5917 759 1 2927 160 0 30 chr2 231346595 231347095 -19340759 - MER66B LTR ERV1 0 486 2 251 250 43 103 chr2 231347308 231347424 -19340430 - L2 LINE L2 0 3313 3205 697 47 264 0 chr2 231347531 231347660 -19340194 - MSTA LTR MaLR -265 163 1 528 336 92 9 chr2 231347812 231348238 -19339616 - L1ME LINE L1 -5598 472 12 505 253 84 26 chr2 231348849 231349003 -19338851 + MIR SINE MIR 1 163 -99 236 122 0 24 chr2 231350279 231350320 -19337534 + MLT1E3 LTR MaLR 5 44 -580 1354 205 102 72 chr2 231350380 231350683 -19337171 + MLT1E3 LTR MaLR 142 435 -189 2382 106 49 9 chr2 231350683 231351033 -19336821 + THE1B LTR MaLR 1 364 0 453 50 0 220 chr2 231351034 231351134 -19336720 - MADE1 DNA Mariner 0 80 3 1354 205 102 72 chr2 231351134 231351297 -19336557 + MLT1E3 LTR MaLR 434 624 0 476 263 0 0 chr2 231351580 231351694 -19336160 + MIR SINE MIR 145 258 -4 6277 43 0 0 chr2 231351718 231352469 -19335385 + L1PA5 LINE L1 5404 6154 0 378 265 22 9 chr2 231352500 231352607 -19335247 - MIR SINE MIR -65 143 45 2024 137 0 40 chr2 231352842 231353164 -19334690 + AluSx SINE Alu 1 309 -3 353 192 260 0 chr2 231353171 231353275 -19334579 + MER5A DNA MER1_type 57 187 -2 243 125 0 0 chr2 231354211 231354251 -19333603 + (CA)n Simple_repeat Simple_repeat 1 40 0 2415 70 3 3 chr2 231355720 231356022 -19331832 + AluY SINE Alu 1 302 -9 705 272 176 25 chr2 231356083 231356406 -19331448 + LTR16C LTR ERVL 101 472 -19 255 297 54 0 chr2 231356617 231356691 -19331163 + MIR SINE MIR 149 226 -36 339 301 57 0 chr2 231357798 231357991 -19329863 - L1ME4a LINE L1 -206 5915 5712 186 133 0 0 chr2 231358908 231358938 -19328916 + (A)n Simple_repeat Simple_repeat 1 30 0 345 235 149 50 chr2 231358947 231359157 -19328697 + MIR SINE MIR 13 260 -2 548 323 65 28 chr2 231359395 231359643 -19328211 + MIR SINE MIR 6 262 0 839 298 107 0 chr2 231360200 231360519 -19327335 - MLT1D-int LTR MaLR -469 902 550 1385 62 16 26 chr2 231360537 231360730 -19327124 - L1PA10 LINE L1 -1 6167 5977 1633 62 67 0 chr2 231360730 231360954 -19326900 + L1PA10 LINE L1 5748 5986 -182 806 255 42 16 chr2 231360952 231361321 -19326533 - MLT1D-int LTR MaLR -857 514 19 * 1931 183 20 93 chr2 231361332 231361872 -19325982 - MLT1D LTR MaLR -4 501 1 1957 126 29 16 chr2 231362465 231362741 -19325113 + AluSq SINE Alu 1 283 -30 261 0 0 0 chr2 231362741 231362770 -19325084 + (CA)n Simple_repeat Simple_repeat 2 30 0 1957 126 29 16 chr2 231362770 231362802 -19325052 + AluSq SINE Alu 283 313 0 22 56 0 0 chr2 231364379 231364415 -19323439 + AT_rich Low_complexity Low_complexity 1 36 0 673 261 37 61 chr2 231365201 231365456 -19322398 + L1ME4a LINE L1 5558 5803 -318 2465 70 0 0 chr2 231365456 231365757 -19322097 + AluY SINE Alu 1 301 -10 673 261 37 61 chr2 231365757 231365876 -19321978 + L1ME4a LINE L1 5803 5923 -198 2289 122 13 27 chr2 231365900 231366276 -19321578 + THE1C LTR MaLR 5 375 0 503 312 0 0 chr2 231366372 231366513 -19321341 - LTR16A LTR ERVL -98 352 212 435 19 0 0 chr2 231366516 231366568 -19321286 + (TTG)n Simple_repeat Simple_repeat 2 53 0 1929 122 0 28 chr2 231366570 231366857 -19320997 - AluSg SINE Alu -31 279 1 1048 240 19 8 chr2 231366940 231367207 -19320647 + MLT1A1 LTR MaLR 1 270 -95 310 317 28 0 chr2 231367225 231367367 -19320487 - LTR16A1 LTR ERVL -309 148 3 194 195 0 24 chr2 231369808 231369849 -19318005 + MIR SINE MIR 34 73 -189 723 314 87 19 chr2 231369871 231370250 -19317604 + MLT1J2 LTR MaLR 24 428 -22 426 282 128 0 chr2 231370287 231370443 -19317411 + MIR SINE MIR 87 262 0 759 246 80 13 chr2 231370597 231370821 -19317033 - MIR SINE MIR -17 245 7 687 264 43 0 chr2 231372188 231372351 -19315503 + MIR SINE MIR 81 250 -12 1096 163 74 30 chr2 231372381 231372651 -19315203 + L1MA9 LINE L1 6030 6311 -1 1069 280 120 14 chr2 231373153 231373596 -19314258 - MLT1H LTR MaLR 0 549 60 2450 55 0 0 chr2 231373764 231374072 -19313782 + L1PA6 LINE L1 5847 6154 0 31 26 0 0 chr2 231374072 231374110 -19313744 + AT_rich Low_complexity Low_complexity 1 38 0 295 221 205 9 chr2 231375055 231375171 -19312683 - MIR3 SINE MIR -6 202 69 1802 158 164 3 chr2 231375370 231375736 -19312118 + MSTB LTR MaLR 2 426 0 244 242 0 45 chr2 231376191 231376257 -19311597 + GA-rich Low_complexity Low_complexity 3 65 0 532 16 0 0 chr2 231377220 231377282 -19310572 + L1PA6 LINE L1 6081 6142 -12 3147 165 42 11 chr2 231378734 231379376 -19308478 - L1MB7 LINE L1 0 6184 5523 1327 282 82 5 chr2 231379990 231380391 -19307463 - L2 LINE L2 -1 3312 2881 181 250 42 42 chr2 231380680 231380752 -19307102 - L2 LINE L2 -329 2943 2872 401 314 90 40 chr2 231381153 231381376 -19306478 - HAL1 LINE L1 -2 2505 2272 416 272 37 7 chr2 231381407 231381543 -19306311 - HAL1 LINE L1 -304 2203 2064 310 352 145 44 chr2 231381632 231381950 -19305904 + L2 LINE L2 2918 3267 -5 219 273 13 39 chr2 231381952 231382029 -19305825 + GA-rich Low_complexity Low_complexity 1 75 0 1838 80 0 25 chr2 231382126 231382365 -19305489 + AluSg SINE Alu 64 296 -14 297 288 169 34 chr2 231382897 231383015 -19304839 - MIR3 SINE MIR -54 154 21 2588 113 39 10 chr2 231383795 231384211 -19303643 - MSTA LTR MaLR 0 428 1 905 182 0 0 chr2 231385036 231385179 -19302675 + FLAM_C SINE Alu 1 143 0 27 0 0 0 chr2 231385517 231385544 -19302310 + AT_rich Low_complexity Low_complexity 1 27 0 318 343 0 9 chr2 231385676 231385784 -19302070 - MIR SINE MIR -102 160 54 21 0 0 0 chr2 231386471 231386492 -19301362 + AT_rich Low_complexity Low_complexity 1 21 0 244 347 129 21 chr2 231387748 231387941 -19299913 + L3 LINE CR1 334 547 -1030 523 329 28 4 chr2 231387990 231388206 -19299648 - L2 LINE L2 -12 3260 3081 2186 185 35 22 chr2 231388276 231388783 -19299071 - L1MB7 LINE L1 -1 6183 5670 3495 196 33 58 chr2 231388783 231389563 -19298291 - L1M4 LINE L1 -378 5806 5008 1584 168 0 17 chr2 231389563 231389854 -19298000 - AluJb SINE Alu -18 294 9 3495 196 33 58 chr2 231389854 231389878 -19297976 - L1M4 LINE L1 -1176 5008 4985 2047 115 13 0 chr2 231389878 231390182 -19297672 + AluY SINE Alu 1 308 -3 3495 196 33 58 chr2 231390182 231391022 -19296832 - L1M4 LINE L1 -1199 4985 4211 454 361 26 26 chr2 231391101 231391328 -19296526 + L3 LINE CR1 1284 1510 -67 255 256 39 26 chr2 231391338 231391416 -19296438 + L3 LINE CR1 1482 1560 -17 21 0 0 0 chr2 231392719 231392740 -19295114 + AT_rich Low_complexity Low_complexity 1 21 0 322 336 119 0 chr2 231394456 231394590 -19293264 - MIR3 SINE MIR -9 199 50 224 217 17 33 chr2 231394772 231394832 -19293022 + MIR3 SINE MIR 113 171 -37 380 294 0 0 chr2 231396552 231396654 -19291200 - MIR SINE MIR -12 250 149 2407 57 0 23 chr2 231396658 231396959 -19290895 - AluY SINE Alu -17 294 1 1201 41 0 0 chr2 231396969 231397116 -19290738 - L1PA4 LINE L1 -3 6152 6006 1783 41 0 0 chr2 231397116 231397337 -19290517 + L1PA4 LINE L1 5772 5992 -163 323 169 14 0 chr2 231398317 231398388 -19289466 + LTR43 LTR ERV1 206 277 -325 732 197 20 7 chr2 231398490 231398637 -19289217 + LTR35 LTR ERV1 470 618 0 253 273 58 50 chr2 231398985 231399124 -19288730 + MIR SINE MIR 85 224 -38 3215 204 88 33 chr2 231399460 231399853 -19288001 + MER21B LTR ERV1 1 371 -492 2476 178 225 93 chr2 231399853 231400754 -19287100 + LTR28 LTR ERV1 1 1020 0 3215 204 88 33 chr2 231400754 231401158 -19286696 + MER21B LTR ERV1 371 842 -21 611 244 91 20 chr2 231402379 231402633 -19285221 + MLT1H LTR MaLR 120 391 -158 188 281 171 24 chr2 231402740 231402822 -19285032 - MIR SINE MIR -82 126 33 2030 168 35 3 chr2 231403605 231403981 -19283873 + MLT1B LTR MaLR 3 390 0 496 115 13 0 chr2 231404397 231404475 -19283379 + MADE1 DNA Mariner 2 80 0 283 327 5 38 chr2 231404477 231404622 -19283232 - MIR3 SINE MIR -29 179 39 2295 300 60 25 chr2 231405213 231406283 -19281571 + L2 LINE L2 2023 3125 -188 2010 146 0 3 chr2 231409060 231409354 -19278500 + AluSx SINE Alu 3 295 -17 2062 147 0 13 chr2 231409413 231409726 -19278128 + AluSx SINE Alu 1 309 -3 532 148 31 8 chr2 231409730 231409858 -19277996 + GA-rich Low_complexity Low_complexity 2 132 0 2475 145 5 0 chr2 231410292 231410691 -19277163 + MSTA LTR MaLR 28 428 0 237 219 0 16 chr2 231412543 231412607 -19275247 - L1MA9 LINE L1 -43 6269 6207 289 268 14 0 chr2 231412608 231412679 -19275175 - L2 LINE L2 -25 3247 3176 1785 225 35 69 chr2 231413339 231413935 -19273919 - L1ME1 LINE L1 -5 6161 5586 2208 115 0 7 chr2 231413953 231414248 -19273606 - AluSc SINE Alu -16 293 1 1024 168 41 5 chr2 231414662 231414858 -19272996 - MER3 DNA MER1_type -6 203 1 284 197 8 145 chr2 231415402 231415519 -19272335 - Charlie8 DNA MER1_type 0 2417 241 477 304 139 52 chr2 231415571 231416183 -19271671 + L1MC4a LINE L1 4168 4832 -1314 * 485 311 4 49 chr2 231416158 231416402 -19271452 + L1MC4a LINE L1 5098 5330 -816 403 145 53 0 chr2 231416403 231416479 -19271375 - L1MA10 LINE L1 -579 5592 5513 3452 150 42 40 chr2 231416479 231416633 -19271221 + L1MA10 LINE L1 5587 5739 -595 273 29 0 0 chr2 231416633 231416667 -19271187 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 3452 150 42 40 chr2 231416667 231417170 -19270684 + L1MA10 LINE L1 5739 6254 -80 1907 139 3 27 chr2 231417170 231417471 -19270383 - AluSx SINE Alu -18 294 1 3452 150 42 40 chr2 231417471 231417552 -19270302 + L1MA10 LINE L1 6254 6333 -1 1650 249 34 36 chr2 231417591 231418201 -19269653 + L1MC4a LINE L1 5317 5925 -1883 5213 83 4 22 chr2 231420238 231421040 -19266814 + L1PA13 LINE L1 5377 6163 0 241 238 127 0 chr2 231421265 231421280 -19266574 + L2 LINE L2 3181 3251 -21 242 229 0 0 chr2 231421280 231421328 -19266526 + MIR SINE MIR 200 247 -15 2042 122 31 3 chr2 231421426 231421712 -19266142 + AluSx SINE Alu 3 296 -16 198 118 0 0 chr2 231422101 231422135 -19265719 + (CA)n Simple_repeat Simple_repeat 1 34 0 427 279 8 33 chr2 231422594 231422716 -19265138 - L2 LINE L2 -6 3307 3189 785 213 43 0 chr2 231423511 231423675 -19264179 + MER63B DNA MER1_type 4 174 -262 256 215 51 0 chr2 231424817 231424896 -19262958 - L1MC4 LINE L1 0 8042 7960 206 196 43 0 chr2 231425546 231425592 -19262262 - L2 LINE L2 -1 3312 3265 2283 96 0 3 chr2 231425972 231426263 -19261591 + AluSc SINE Alu 5 294 -15 235 252 0 59 chr2 231426384 231426503 -19261351 + L1MC4a LINE L1 3592 3703 -2443 472 311 82 53 chr2 231426561 231426937 -19260917 + L1MC4a LINE L1 3866 4252 -1894 3052 151 13 103 chr2 231426944 231427086 -19260768 + L1MA10 LINE L1 5593 5746 -416 2211 120 0 3 chr2 231427086 231427385 -19260469 + AluSx SINE Alu 3 300 -12 3052 151 13 103 chr2 231427385 231427440 -19260414 + L1MA10 LINE L1 5746 5804 -358 1842 142 11 11 chr2 231427440 231427748 -19260106 - AluSx SINE Alu 0 308 1 3052 151 13 103 chr2 231427748 231427817 -19260037 + L1MA10 LINE L1 5804 5878 -284 1854 154 0 3 chr2 231427817 231428103 -19259751 - AluJb SINE Alu -23 289 5 3052 151 13 103 chr2 231428103 231428617 -19259237 + L1MA10 LINE L1 5878 6143 -19 260 285 16 22 chr2 231428632 231428797 -19259057 + L1MC4a LINE L1 5362 5526 -638 313 341 102 23 chr2 231428810 231429106 -19258748 + L1MC4a LINE L1 5540 5824 -297 194 372 22 44 chr2 231429793 231429930 -19257924 - MIR3 SINE MIR -13 195 62 321 335 74 22 chr2 231429964 231430194 -19257660 - MIR SINE MIR -7 255 14 412 287 93 42 chr2 231431247 231431463 -19256391 + L1 LINE L1 2701 2927 -3219 623 289 28 64 chr2 231431622 231431840 -19256014 + MIR SINE MIR 19 228 -34 2508 65 7 3 chr2 231431840 231432150 -19255704 + AluY SINE Alu 1 311 0 348 164 0 0 chr2 231433034 231433101 -19254753 + CT-rich Low_complexity Low_complexity 2 68 0 213 222 0 0 chr2 231433641 231433695 -19254159 + A-rich Low_complexity Low_complexity 1 54 0 2242 109 0 3 chr2 231434196 231434499 -19253355 + AluSx SINE Alu 1 302 -10 457 319 78 62 chr2 231435208 231435742 -19252112 + L2 LINE L2 2731 3272 0 195 42 0 0 chr2 231435985 231436009 -19251845 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1609 166 68 0 chr2 231436011 231436276 -19251578 - AluJb SINE Alu -29 283 1 615 104 38 19 chr2 231436974 231437080 -19250774 - AluSg/x SINE Alu -24 286 179 2335 111 0 0 chr2 231437545 231437851 -19250003 - AluSx SINE Alu -6 306 1 180 258 0 65 chr2 231438235 231438297 -19249557 - MIR SINE MIR -111 151 94 1382 206 141 103 chr2 231439366 231439723 -19248131 + MLT1E1 LTR MaLR 1 394 -260 1195 34 17 17 chr2 231439723 231439898 -19247956 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 1382 206 141 103 chr2 231439898 231440170 -19247684 + MLT1E1 LTR MaLR 394 654 0 745 145 0 83 chr2 231440695 231440840 -19247014 - FLAM_C SINE Alu 0 133 1 291 271 82 27 chr2 231441042 231441361 -19246493 + L1ME LINE L1 4919 5255 -891 * 5460 173 27 8 chr2 231441343 231442524 -19245330 + L1 LINE L1 3413 4616 -1530 1083 161 6 0 chr2 231442524 231442704 -19245150 + MLT2B1 LTR ERVL 1 181 -339 693 135 38 8 chr2 231442706 231442839 -19245015 + L1MA9 LINE L1 6086 6222 -90 244 270 122 3 chr2 231443130 231443319 -19244535 + L1ME LINE L1 5496 5711 -451 210 191 57 19 chr2 231443641 231443746 -19244108 + (TA)n Simple_repeat Simple_repeat 2 110 0 224 327 135 0 chr2 231443803 231443907 -19243947 + L2 LINE L2 3191 3308 -5 27 49 0 0 chr2 231444067 231444108 -19243746 + AT_rich Low_complexity Low_complexity 1 41 0 352 344 56 65 chr2 231444645 231445115 -19242739 - L2 LINE L2 -189 3083 2612 690 159 0 0 chr2 231445115 231445222 -19242632 + AluSq/x SINE Alu 1 107 -206 578 248 14 7 chr2 231445390 231445531 -19242323 + MLT1H LTR MaLR 11 152 -397 22 35 0 0 chr2 231445606 231445635 -19242219 + AT_rich Low_complexity Low_complexity 1 29 0 23 78 0 0 chr2 231446088 231446139 -19241715 + AT_rich Low_complexity Low_complexity 1 51 0 1857 191 0 0 chr2 231446323 231446627 -19241227 - AluJb SINE Alu -8 304 1 2295 105 0 0 chr2 231447400 231447695 -19240159 + AluSx SINE Alu 3 297 -15 1940 139 0 20 chr2 231447853 231448156 -19239698 + AluJo SINE Alu 3 299 -13 923 139 7 0 chr2 231448158 231448309 -19239545 + L1PB4 LINE L1 5997 6148 -8 264 347 104 7 chr2 231449039 231449183 -19238671 - MIR3 SINE MIR -28 180 23 527 253 82 18 chr2 231449423 231449527 -19238327 + MER5A DNA MER1_type 9 130 -59 1921 136 24 10 chr2 231449527 231449821 -19238033 - AluSx SINE Alu -14 298 1 527 253 82 18 chr2 231449821 231449886 -19237968 + MER5A DNA MER1_type 130 189 0 214 194 45 15 chr2 231450172 231450239 -19237615 + T-rich Low_complexity Low_complexity 3 71 0 180 125 0 0 chr2 231450526 231450558 -19237296 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 21 57 0 0 chr2 231450983 231451018 -19236836 + AT_rich Low_complexity Low_complexity 1 35 0 2852 144 67 0 chr2 231452094 231452600 -19235254 + Tigger3b DNA MER2_type 1 540 -691 2222 102 20 0 chr2 231452600 231452894 -19234960 - AluSx SINE Alu -12 300 1 2695 153 19 6 chr2 231452894 231453321 -19234533 + Tigger3b DNA MER2_type 743 1179 -1850 1836 144 0 24 chr2 231453321 231453644 -19234210 + AluSq SINE Alu 1 316 0 2695 153 19 6 chr2 231453644 231453698 -19234156 + Tigger3b DNA MER2_type 1179 1231 -1 347 303 43 48 chr2 231453813 231454044 -19233810 - MLT1K LTR MaLR -346 242 13 277 188 52 21 chr2 231454818 231454914 -19232940 + (TA)n Simple_repeat Simple_repeat 1 99 0 243 276 46 11 chr2 231456194 231456281 -19231573 - MIR SINE MIR -28 234 145 246 301 45 53 chr2 231456777 231456910 -19230944 - L2 LINE L2 -2 3311 3180 21 57 0 0 chr2 231456952 231456987 -19230867 + AT_rich Low_complexity Low_complexity 1 35 0 2289 111 36 28 chr2 231457148 231457509 -19230345 - THE1B LTR MaLR 0 364 1 30 27 0 0 chr2 231458514 231458551 -19229303 + AT_rich Low_complexity Low_complexity 1 37 0 2246 163 35 9 chr2 231458636 231459060 -19228794 + MSTB LTR MaLR 1 426 0 4415 287 73 26 chr2 231459102 231461777 -19226077 - L2 LINE L2 0 3313 518 2237 23 0 0 chr2 231461788 231462051 -19225803 - L1PA4 LINE L1 -2 6153 5891 3571 36 0 0 chr2 231462051 231462492 -19225362 + L1PA4 LINE L1 5460 5900 -254 664 295 0 6 chr2 231462554 231462737 -19225117 - L2 LINE L2 -2912 402 221 2868 87 30 9 chr2 231462737 231463163 -19224691 - MLT2A1 LTR ERVL -9 435 1 1405 58 39 40 chr2 231463239 231463508 -19224346 + AluY SINE Alu 1 309 0 2304 78 16 47 chr2 231463521 231463840 -19224014 + AluSc SINE Alu 1 309 0 276 268 41 21 chr2 231463851 231463948 -19223906 - L2 LINE L2 -3193 121 23 258 307 40 30 chr2 231464923 231465024 -19222830 + MIR SINE MIR 21 122 -86 236 146 0 21 chr2 231465405 231465453 -19222401 + (CA)n Simple_repeat Simple_repeat 2 48 0 277 345 5 62 chr2 231465597 231465791 -19222063 + MIR SINE MIR 80 262 0 273 119 0 0 chr2 231472021 231472063 -19215791 + (A)n Simple_repeat Simple_repeat 1 42 0 27 73 0 0 chr2 231472878 231472933 -19214921 + AT_rich Low_complexity Low_complexity 1 55 0 226 312 123 58 chr2 231473038 231473176 -19214678 - L2 LINE L2 -3 3269 3123 543 287 66 0 chr2 231474120 231474301 -19213553 - MIR SINE MIR -23 239 47 4685 82 35 0 chr2 231474645 231475306 -19212548 - L1PA13 LINE L1 -5 6158 5475 312 172 0 0 chr2 231475428 231475486 -19212368 + (TA)n Simple_repeat Simple_repeat 2 59 0 2087 5 0 0 chr2 231477911 231478135 -19209719 + AluYb8 SINE Alu 86 309 -9 384 262 12 0 chr2 231478150 231478234 -19209620 + MER5A DNA MER1_type 3 87 -102 615 303 20 80 chr2 231478446 231478746 -19209108 - L3 LINE CR1 -7 1570 1289 285 29 0 0 chr2 231479272 231479306 -19208548 + (CA)n Simple_repeat Simple_repeat 1 34 0 198 0 0 0 chr2 231479306 231479328 -19208526 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1233 182 77 80 chr2 231480135 231480448 -19207406 + AluJo SINE Alu 1 312 0 432 262 60 33 chr2 231480679 231481036 -19206818 + MLT1I LTR MaLR 1 409 0 381 271 87 26 chr2 231481393 231481622 -19206232 - MER113 DNA MER1_type? -233 288 46 1880 167 7 7 chr2 231481789 231482089 -19205765 + AluJo SINE Alu 1 300 -12 586 181 21 69 chr2 231482219 231482363 -19205491 + MIR SINE MIR 80 216 -46 584 229 22 39 chr2 231483431 231483610 -19204244 + MIR SINE MIR 17 192 -70 187 317 173 48 chr2 231483653 231483757 -19204097 - L2 LINE L2 -17 3296 3180 2020 181 63 2 chr2 231483772 231484169 -19203685 - MSTB LTR MaLR -5 421 1 1760 171 0 44 chr2 231484331 231484647 -19203207 + AluJb SINE Alu 1 302 -10 297 244 183 23 chr2 231485129 231485215 -19202639 - MIR SINE MIR -3 259 188 328 187 13 0 chr2 231485215 231485290 -19202564 - MER116 DNA Mariner -4 76 1 297 244 183 23 chr2 231485290 231485334 -19202520 - MIR SINE MIR -74 188 108 2134 112 0 0 chr2 231486368 231486645 -19201209 + AluSc SINE Alu 1 277 -32 734 60 10 0 chr2 231486645 231486745 -19201109 + (GAAA)n Simple_repeat Simple_repeat 3 103 0 216 189 0 0 chr2 231487109 231487146 -19200708 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 181 238 0 0 chr2 231487196 231487238 -19200616 - L2 LINE L2 -94 3178 3137 587 312 42 9 chr2 231487561 231487776 -19200078 - MIR SINE MIR -6 256 35 258 350 73 7 chr2 231488162 231488299 -19199555 - MIR3 SINE MIR -42 166 21 216 158 0 0 chr2 231488564 231488602 -19199252 + T-rich Low_complexity Low_complexity 1 38 0 296 382 81 16 chr2 231489461 231489707 -19198147 + L2 LINE L2 2830 3091 -181 1276 266 62 26 chr2 231489728 231490149 -19197705 + MER74B LTR ERVL 58 505 -117 189 0 0 0 chr2 231490149 231490170 -19197684 + (GCATG)n Simple_repeat Simple_repeat 5 25 0 1276 266 62 26 chr2 231490170 231490293 -19197561 + MER74B LTR ERVL 505 622 0 314 45 23 0 chr2 231490400 231490444 -19197410 + (TG)n Simple_repeat Simple_repeat 1 45 0 1260 142 0 66 chr2 231490448 231490659 -19197195 - AluSg/x SINE Alu -37 275 79 325 305 36 9 chr2 231492245 231492458 -19195396 - L1MC/D LINE L1 -659 5507 5315 370 301 28 0 chr2 231492475 231492618 -19195236 - L1MC/D LINE L1 -873 5273 5127 785 313 100 14 chr2 231493084 231494055 -19193799 - L1MC/D LINE L1 -1302 4844 3791 22 0 0 0 chr2 231494087 231494109 -19193745 + AT_rich Low_complexity Low_complexity 1 22 0 2209 137 0 6 chr2 231494350 231494709 -19193145 - L1PB1 LINE L1 -1 6150 5794 213 47 70 0 chr2 231494709 231494752 -19193102 + (TA)n Simple_repeat Simple_repeat 1 46 0 1929 161 10 10 chr2 231494785 231495095 -19192759 + AluJo SINE Alu 1 310 -2 1080 97 0 0 chr2 231495755 231495910 -19191944 + (GAA)n Simple_repeat Simple_repeat 2 156 0 1857 181 40 48 chr2 231496383 231496837 -19191017 + MLT1C LTR MaLR 1 450 -17 426 39 0 0 chr2 231498343 231498395 -19189459 + (TG)n Simple_repeat Simple_repeat 1 52 0 220 136 37 25 chr2 231498429 231498510 -19189344 + (TA)n Simple_repeat Simple_repeat 1 82 0 1630 178 7 11 chr2 231498510 231498796 -19189058 - AluJb SINE Alu -27 285 1 392 239 9 0 chr2 231498797 231498906 -19188948 - L1MA9 LINE L1 -207 6105 5996 255 306 0 12 chr2 231499135 231499220 -19188634 + L2 LINE L2 3144 3227 -86 3967 52 0 2 chr2 231499427 231499924 -19187930 + L1PA4 LINE L1 5652 6147 -8 863 232 69 32 chr2 231501345 231501591 -19186263 + MIR SINE MIR 2 256 -6 244 248 53 80 chr2 231501989 231502102 -19185752 + MIR SINE MIR 152 261 -1 1839 155 0 31 chr2 231502102 231502424 -19185430 - AluJo SINE Alu 0 312 1 972 313 94 53 chr2 231502436 231503119 -19184735 - L1MEd LINE L1 -5079 1040 330 1600 162 97 9 chr2 231503293 231503614 -19184240 + MLT2D LTR ERVL 1 349 -65 258 244 0 0 chr2 231503656 231503738 -19184116 + (CA)n Simple_repeat Simple_repeat 2 83 0 304 222 0 0 chr2 231504014 231504068 -19183786 + AluJb SINE Alu 1 54 -247 777 119 0 0 chr2 231504108 231504226 -19183628 + MLT2D LTR ERVL 1 118 -296 1277 193 25 0 chr2 231504235 231504478 -19183376 + AluJb SINE Alu 57 305 -7 2263 100 3 7 chr2 231504809 231505118 -19182736 - AluSq SINE Alu -5 308 1 1468 193 63 14 chr2 231505316 231505664 -19182190 - MLT1A1 LTR MaLR 0 365 1 507 353 42 13 chr2 231505738 231505976 -19181878 - MIR SINE MIR -2 260 16 21 0 0 0 chr2 231506003 231506024 -19181830 + AT_rich Low_complexity Low_complexity 1 21 0 601 232 104 86 chr2 231506055 231506219 -19181635 - MIR SINE MIR -36 226 55 2051 94 3 44 chr2 231506219 231506544 -19181310 + AluSx SINE Alu 1 313 0 601 232 104 86 chr2 231506544 231506598 -19181256 - MIR SINE MIR -207 55 3 1243 189 107 34 chr2 231506617 231507057 -19180797 + Charlie1b DNA MER1_type 41 512 -11 2271 129 0 0 chr2 231507141 231507450 -19180404 + AluSx SINE Alu 1 309 -3 373 248 17 43 chr2 231507559 231507676 -19180178 + MIR SINE MIR 149 262 0 237 394 0 0 chr2 231507918 231508017 -19179837 + MIR SINE MIR 45 143 -65 2275 90 7 0 chr2 231508196 231508484 -19179370 + AluSg SINE Alu 1 290 -20 288 0 0 0 chr2 231508488 231508520 -19179334 + (TA)n Simple_repeat Simple_repeat 1 32 0 1880 174 0 13 chr2 231508637 231508941 -19178913 + AluJo SINE Alu 1 300 -12 3912 178 42 29 chr2 231508952 231509612 -19178242 + L1MB7 LINE L1 5041 5726 -458 2306 118 0 6 chr2 231509612 231509925 -19177929 + AluSx SINE Alu 1 311 -1 3912 178 42 29 chr2 231509925 231510379 -19177475 + L1MB7 LINE L1 5726 6172 -12 418 302 72 38 chr2 231510515 231510548 -19177306 + L1ME4a LINE L1 5265 5295 -826 2088 145 28 14 chr2 231510548 231510907 -19176947 - THE1B LTR MaLR 0 364 1 418 302 72 38 chr2 231510907 231511543 -19176311 + L1ME4a LINE L1 5295 5957 -164 314 282 24 106 chr2 231511599 231511738 -19176116 + L1ME4a LINE L1 1147 1296 -4785 1624 186 7 23 chr2 231511738 231512044 -19175810 + AluJo SINE Alu 1 301 -11 314 282 24 106 chr2 231512044 231512074 -19175780 + L1ME4a LINE L1 1296 6035 -46 288 311 237 0 chr2 231512212 231512347 -19175507 + MIR SINE MIR 86 252 -10 198 80 60 20 chr2 231512846 231512896 -19174958 + (TATAA)n Simple_repeat Simple_repeat 1 52 0 2224 116 13 0 chr2 231513854 231514155 -19173699 + AluSx SINE Alu 1 305 -7 214 100 50 25 chr2 231514182 231514222 -19173632 - MER5A DNA MER1_type -99 90 50 917 182 32 16 chr2 231514443 231514630 -19173224 - MER2 DNA MER2_type -155 190 1 227 353 96 0 chr2 231515595 231515731 -19172123 + MIR SINE MIR 114 262 0 2056 120 3 43 chr2 231515792 231516116 -19171738 + AluSq SINE Alu 1 311 -2 285 207 52 0 chr2 231516130 231516188 -19171666 + MLT1I LTR MaLR 347 407 -2 210 196 233 113 chr2 231516953 231517029 -19170825 - MIR SINE MIR 0 262 197 2305 165 116 41 chr2 231517029 231517513 -19170341 + MLT2B1 LTR ERVL 1 520 0 210 196 233 113 chr2 231517513 231517569 -19170285 - MIR SINE MIR -65 197 114 2117 113 0 39 chr2 231517956 231518266 -19169588 + AluSx SINE Alu 1 298 -14 2571 170 19 30 chr2 231518570 231518857 -19168997 - MLT1C LTR MaLR 0 467 185 2276 108 3 19 chr2 231518857 231519172 -19168682 - AluSq SINE Alu -3 310 1 2571 170 19 30 chr2 231519172 231519355 -19168499 - MLT1C LTR MaLR -282 185 2 2256 119 3 0 chr2 231519416 231519719 -19168135 + AluSx SINE Alu 1 304 -8 516 165 0 0 chr2 231519757 231519836 -19168018 + AluS SINE Alu 223 301 -8 2010 119 7 20 chr2 231520790 231521105 -19166749 - AluSx SINE Alu 0 312 1 401 144 164 10 chr2 231521117 231521221 -19166633 + L1MA6 LINE L1 6181 6300 0 894 271 4 36 chr2 231521366 231521674 -19166180 + L1MC4 LINE L1 7393 7784 -211 800 159 44 92 chr2 231521723 231521950 -19165904 + L1MC4 LINE L1 7827 8042 0 28 0 0 0 chr2 231521951 231521979 -19165875 + AT_rich Low_complexity Low_complexity 1 28 0 2310 104 3 3 chr2 231522024 231522333 -19165521 - AluSq SINE Alu -3 310 2 596 221 98 6 chr2 231522590 231522753 -19165101 - MER5B DNA MER1_type 0 178 1 722 168 50 62 chr2 231522850 231523011 -19164843 + AluJ SINE Alu 15 173 -139 824 138 0 0 chr2 231523120 231523236 -19164618 + AluJ SINE Alu 167 282 -30 322 223 96 32 chr2 231523252 231523346 -19164508 + MER5A DNA MER1_type 64 163 -26 2021 148 3 7 chr2 231523380 231523690 -19164164 - AluSx SINE Alu -3 309 1 258 105 0 0 chr2 231523843 231523881 -19163973 + (TTCC)n Simple_repeat Simple_repeat 1 38 0 319 295 54 18 chr2 231524079 231524191 -19163663 + MLT1L LTR MaLR 363 478 -137 260 241 71 113 chr2 231524823 231524964 -19162890 + MER5A DNA MER1_type 51 185 -4 2330 101 0 0 chr2 231527396 231527703 -19160151 + AluSc SINE Alu 1 307 -2 2163 113 0 0 chr2 231528996 231529312 -19158542 + AluSx SINE Alu 1 316 0 235 262 48 60 chr2 231529345 231529429 -19158425 - MIR SINE MIR -2 260 178 405 43 0 0 chr2 231529450 231529533 -19158321 - AluSx SINE Alu 0 320 238 1490 114 0 0 chr2 231529533 231529735 -19158119 - AluSx SINE Alu -110 202 1 608 210 84 0 chr2 231529745 231529888 -19157966 - MIR SINE MIR -106 156 2 1185 133 0 0 chr2 231530486 231530651 -19157203 - AluSg/x SINE Alu -15 295 131 280 287 75 11 chr2 231530763 231530857 -19156997 + MIR SINE MIR 163 262 0 372 261 90 86 chr2 231530885 231530928 -19156926 - L1MC/D LINE L1 -748 5398 5357 2286 81 3 7 chr2 231530928 231531224 -19156630 + AluY SINE Alu 1 295 -16 372 261 90 86 chr2 231531224 231531797 -19156057 - L1MC/D LINE L1 -789 5357 5042 1994 138 21 0 chr2 231532012 231532302 -19155552 + AluSx SINE Alu 1 296 -16 24 0 0 0 chr2 231532307 231532331 -19155523 + AT_rich Low_complexity Low_complexity 1 24 0 337 333 14 35 chr2 231532396 231532537 -19155317 - MIR3 SINE MIR -63 145 8 1969 108 45 14 chr2 231534576 231534864 -19152990 + AluSx SINE Alu 1 297 -15 572 305 0 23 chr2 231535036 231535210 -19152644 - MER58B DNA MER1_type 0 341 172 757 307 73 29 chr2 231535432 231535666 -19152188 - L2 LINE L2 -767 2547 2288 2103 146 0 0 chr2 231535666 231535961 -19151893 + AluSx SINE Alu 1 295 -17 757 307 73 29 chr2 231535961 231536107 -19151747 - L2 LINE L2 -1026 2288 2150 2236 116 0 25 chr2 231536292 231536612 -19151242 - AluSx SINE Alu 0 312 1 647 184 8 24 chr2 231536669 231536794 -19151060 + L1PA16 LINE L1 6042 6164 -2 33 0 0 0 chr2 231536828 231536861 -19150993 + AT_rich Low_complexity Low_complexity 1 33 0 459 175 48 10 chr2 231537299 231537402 -19150452 + L1ME LINE L1 166 272 -5933 480 84 99 14 chr2 231537425 231537496 -19150358 - AluS SINE Alu -235 78 2 633 229 75 42 chr2 231537499 231537713 -19150141 + L1ME LINE L1 1441 1661 -4735 526 319 32 0 chr2 231537749 231537934 -19149920 + L1ME LINE L1 1652 1842 -4554 783 233 92 35 chr2 231538252 231538594 -19149260 - LTR37B LTR ERV1 0 468 90 1615 176 30 57 chr2 231538726 231539096 -19148758 - MLT1A2 LTR MaLR -11 363 4 298 267 115 38 chr2 231539446 231539649 -19148205 - MIR SINE MIR -19 243 13 1939 133 0 7 chr2 231539733 231540019 -19147835 - AluSx SINE Alu -28 284 1 551 226 144 15 chr2 231540074 231540269 -19147585 - L2 LINE L2 -896 2418 2199 865 276 41 8 chr2 231540577 231540820 -19147034 - MIR SINE MIR -4 258 8 1840 138 0 51 chr2 231541353 231541665 -19146189 + L1MB4 LINE L1 5834 6129 -51 2085 139 0 3 chr2 231541677 231541972 -19145882 + AluSx SINE Alu 2 295 -17 1573 164 43 4 chr2 231541987 231542243 -19145611 + AluJo SINE Alu 39 304 -8 297 0 0 0 chr2 231542264 231542297 -19145557 + (CA)n Simple_repeat Simple_repeat 2 34 0 2450 68 0 3 chr2 231542359 231542651 -19145203 + AluY SINE Alu 1 291 -20 258 32 0 0 chr2 231542683 231542714 -19145140 + (CA)n Simple_repeat Simple_repeat 2 32 0 289 136 15 45 chr2 231542772 231542838 -19145016 + L1MB1 LINE L1 6122 6185 -4 232 178 67 0 chr2 231542839 231542884 -19144970 + polypurine Low_complexity Low_complexity 5 52 0 235 91 0 0 chr2 231542884 231542917 -19144937 + L1MA10 LINE L1 6179 6211 -123 872 251 27 0 chr2 231542922 231543109 -19144745 + MER63A DNA MER1_type 19 210 0 644 266 47 19 chr2 231543113 231543327 -19144527 + L2 LINE L2 3094 3313 0 230 303 20 30 chr2 231543460 231543559 -19144295 + Charlie7 DNA MER1_type 5 102 -2510 238 213 0 0 chr2 231543722 231543783 -19144071 + Charlie7 DNA MER1_type 96 156 -2456 271 143 0 0 chr2 231543957 231543999 -19143855 + Charlie7 DNA MER1_type 1805 1846 -766 203 267 0 33 chr2 231544161 231544221 -19143633 + MER5A DNA MER1_type 12 69 -120 395 345 26 0 chr2 231544276 231544392 -19143462 + L2 LINE L2 3153 3271 -1 2633 108 28 19 chr2 231546054 231546415 -19141439 - THE1B LTR MaLR 0 364 1 23 33 0 0 chr2 231546417 231546447 -19141407 + AT_rich Low_complexity Low_complexity 1 30 0 512 154 58 0 chr2 231546491 231546595 -19141259 - MIR SINE MIR -127 135 26 1882 133 23 13 chr2 231547568 231547870 -19139984 + AluSq SINE Alu 1 305 -8 311 257 49 83 chr2 231548170 231548314 -19139540 + MIR3 SINE MIR 41 179 -29 383 298 48 16 chr2 231548609 231548733 -19139121 + L2 LINE L2 3145 3272 0 357 306 27 3 chr2 231548737 231548936 -19138918 - MIR SINE MIR 0 262 12 2308 90 0 13 chr2 231549635 231549935 -19137919 - AluSx SINE Alu -16 296 1 31 26 0 0 chr2 231550345 231550383 -19137471 + AT_rich Low_complexity Low_complexity 1 38 0 258 32 0 0 chr2 231550546 231550577 -19137277 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1698 123 21 0 chr2 231550584 231550827 -19137027 - AluSq SINE Alu -52 261 14 221 56 0 28 chr2 231551135 231551171 -19136683 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 676 209 0 0 chr2 231551174 231551279 -19136575 - FRAM SINE Alu -30 146 42 380 179 0 179 chr2 231551297 231551403 -19136451 - L1MA4 LINE L1 -1 6299 6226 1463 186 16 36 chr2 231551403 231551709 -19136145 + AluJo SINE Alu 13 312 0 380 179 0 179 chr2 231551709 231551753 -19136101 - L1MA4 LINE L1 -74 6226 6176 182 222 89 0 chr2 231552287 231552332 -19135522 + MIR SINE MIR 86 134 -74 1685 154 11 71 chr2 231552470 231552834 -19135020 - MER4A LTR ERV1 -1 663 263 535 122 89 0 chr2 231552834 231552924 -19134930 - MER4A LTR ERV1 -566 98 1 741 312 96 24 chr2 231552953 231553373 -19134481 - LTR16A LTR ERVL 0 457 7 258 329 66 14 chr2 231553437 231553650 -19134204 - HERV16 LTR ERVL -45 4951 4728 317 230 137 37 chr2 231553966 231554127 -19133727 - MLT1J2 LTR MaLR -6 444 268 275 217 14 43 chr2 231554159 231554228 -19133626 - MER76 LTR ERV -21 667 601 3150 39 0 0 chr2 231554228 231554586 -19133268 + L1PA4 LINE L1 5798 6155 0 983 202 231 88 chr2 231554618 231554972 -19132882 - MER76 LTR ERV -72 616 161 2205 104 17 3 chr2 231554972 231555270 -19132584 - AluSq SINE Alu -11 302 1 983 202 231 88 chr2 231555270 231555439 -19132415 - MER76 LTR ERV -527 161 18 487 274 40 17 chr2 231555427 231555602 -19132252 - MLT1J2 LTR MaLR -271 179 1 * 2228 90 4 0 chr2 231556665 231556979 -19130875 - AluY SINE Alu 0 315 1 1207 217 80 83 chr2 231557469 231557843 -19130011 + MLT1A2 LTR MaLR 1 373 -1 447 221 57 16 chr2 231557903 231558025 -19129829 + MLT1I LTR MaLR 1 127 -282 244 242 61 30 chr2 231558065 231558131 -19129723 + MLT1J1 LTR MaLR 241 308 -138 278 200 0 0 chr2 231558193 231558238 -19129616 + MLT1I LTR MaLR 365 409 0 502 259 142 81 chr2 231559926 231559978 -19127876 - MLT1L LTR MaLR -254 361 314 2084 129 0 35 chr2 231559978 231560295 -19127559 - AluSx SINE Alu -6 306 1 502 259 142 81 chr2 231560295 231560574 -19127280 - MLT1L LTR MaLR -301 314 10 537 345 32 43 chr2 231560757 231561319 -19126535 + L2 LINE L2 1353 1908 -1406 1749 179 49 9 chr2 231561348 231561694 -19126160 + MLT1A1 LTR MaLR 6 365 0 736 78 0 29 chr2 231561750 231561852 -19126002 - AluSp SINE Alu -6 307 209 1058 98 0 0 chr2 231561857 231561990 -19125864 - AluSp SINE Alu -180 133 1 827 211 86 21 chr2 231562171 231562410 -19125444 + MIR SINE MIR 10 262 0 450 315 120 35 chr2 231562421 231562789 -19125065 + L2 LINE L2 2220 2618 -696 2304 113 3 0 chr2 231563377 231563687 -19124167 + AluSx SINE Alu 1 311 -1 273 119 0 0 chr2 231563745 231563787 -19124067 + (TG)n Simple_repeat Simple_repeat 1 42 0 665 186 18 0 chr2 231563790 231563903 -19123951 - FLAM_C SINE Alu -18 115 1 308 349 98 8 chr2 231563903 231564035 -19123819 + MER5B DNA MER1_type 35 178 0 14524 198 20 12 chr2 231564523 231566286 -19121568 + L1PB1 LINE L1 2877 4625 -2964 882 144 0 0 chr2 231566286 231566411 -19121443 + FLAM_C SINE Alu 1 125 -8 14524 198 20 12 chr2 231566411 231566687 -19121167 + L1PB1 LINE L1 4625 4897 -2692 2077 108 10 14 chr2 231566687 231566984 -19120870 + AluSq SINE Alu 1 296 -17 14524 198 20 12 chr2 231566984 231569253 -19118601 + L1PB1 LINE L1 4897 7234 -355 378 0 0 0 chr2 231569253 231569295 -19118559 + (CA)n Simple_repeat Simple_repeat 2 43 0 14524 198 20 12 chr2 231569295 231569653 -19118201 + L1PB1 LINE L1 7234 7588 -1 1861 120 31 3 chr2 231569767 231570059 -19117795 + AluSq SINE Alu 1 300 -13 449 202 11 11 chr2 231570590 231570684 -19117170 - MIR SINE MIR -85 177 84 180 321 38 75 chr2 231571748 231571960 -19115894 + L2 LINE L2 2950 3153 -119 21 0 0 0 chr2 231572614 231572635 -19115219 + AT_rich Low_complexity Low_complexity 1 21 0 290 102 0 0 chr2 231572656 231572705 -19115149 - AluY SINE Alu 0 300 252 1512 104 0 0 chr2 231572705 231572897 -19114957 - AluY SINE Alu -119 192 1 21 0 0 0 chr2 231573051 231573072 -19114782 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 231573308 231573329 -19114525 + AT_rich Low_complexity Low_complexity 1 21 0 2938 82 0 8 chr2 231573759 231574126 -19113728 - THE1B LTR MaLR 0 364 1 267 287 58 67 chr2 231574233 231574456 -19113398 + MLT1J LTR MaLR 289 509 -2 558 302 0 50 chr2 231574777 231574956 -19112898 + MIR SINE MIR 65 234 -28 255 103 0 0 chr2 231575304 231575343 -19112511 + (CA)n Simple_repeat Simple_repeat 2 40 0 2192 113 13 0 chr2 231575432 231575732 -19112122 - AluSg SINE Alu -6 304 1 554 293 94 61 chr2 231575753 231576189 -19111665 + L2 LINE L2 2616 3088 -225 1098 119 12 12 chr2 231576200 231576368 -19111486 - FRAM SINE Alu -9 167 1 473 263 97 6 chr2 231576397 231576572 -19111282 + L2 LINE L2 3123 3313 0 372 164 47 55 chr2 231577144 231577223 -19110631 + L1MC3 LINE L1 6985 7064 -721 2919 82 3 0 chr2 231577223 231577577 -19110277 + THE1A LTR MaLR 1 355 0 372 164 47 55 chr2 231577577 231577625 -19110229 + L1MC3 LINE L1 7064 7111 -674 300 179 18 0 chr2 231577626 231577682 -19110172 + MLT1F1 LTR MaLR 61 117 -450 2420 199 19 19 chr2 231577684 231578040 -19109814 + L1MD3 LINE L1 7513 7871 -124 2395 134 67 46 chr2 231578040 231578275 -19109579 - MSTB LTR MaLR 0 426 176 1695 155 29 11 chr2 231578275 231578585 -19109269 - AluJo SINE Alu 0 315 1 2395 134 67 46 chr2 231578585 231578765 -19109089 - MSTB LTR MaLR -250 176 1 2420 199 19 19 chr2 231578765 231578891 -19108963 + L1MD3 LINE L1 7870 7995 0 344 351 7 20 chr2 231578942 231579090 -19108764 - MIR SINE MIR -101 161 16 2158 104 7 3 chr2 231579309 231579596 -19108258 + AluSq SINE Alu 1 288 -25 353 266 47 94 chr2 231580701 231580713 -19107141 - MIR SINE MIR -65 197 186 2003 133 14 3 chr2 231580713 231581007 -19106847 + AluSx SINE Alu 2 298 -14 353 266 47 94 chr2 231581007 231581072 -19106782 - MIR SINE MIR -76 186 119 1493 159 30 0 chr2 231581072 231581304 -19106550 - L1PB4 LINE L1 -12 6144 5906 353 266 47 94 chr2 231581304 231581417 -19106437 - MIR SINE MIR -143 119 15 1808 129 4 0 chr2 231582052 231582307 -19105547 + AluSx SINE Alu 41 296 -16 217 186 47 0 chr2 231582776 231582819 -19105035 - MIR3 SINE MIR -11 197 153 2199 116 3 0 chr2 231582905 231583197 -19104657 + AluSx SINE Alu 1 293 -19 1332 209 36 33 chr2 231583614 231583944 -19103910 + MER2 DNA MER2_type 1 331 -14 579 310 95 16 chr2 231584099 231584341 -19103513 - MIR SINE MIR 0 262 2 2244 118 0 9 chr2 231584492 231584807 -19103047 + AluSx SINE Alu 1 312 0 474 281 42 52 chr2 231584827 231585019 -19102835 - L2 LINE L2 -191 3081 2892 2277 91 3 0 chr2 231585216 231585502 -19102352 + AluSq SINE Alu 6 292 -21 1383 178 33 30 chr2 231585541 231585832 -19102022 + L1MD3 LINE L1 7691 7985 -10 1437 162 33 30 chr2 231585832 231586134 -19101720 + L1MA9 LINE L1 6000 6302 -10 1383 178 33 30 chr2 231586134 231586146 -19101708 + L1MD3 LINE L1 7985 7995 0 372 293 20 7 chr2 231586280 231586427 -19101427 + L1M4 LINE L1 2933 3081 -3065 192 77 0 0 chr2 231586427 231586453 -19101401 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2723 135 124 33 chr2 231586551 231587068 -19100786 + LTR6A LTR ERV1 1 564 0 830 219 0 0 chr2 231587082 231587228 -19100626 + AluJb SINE Alu 134 279 -33 245 0 86 0 chr2 231587229 231587264 -19100590 + T-rich Low_complexity Low_complexity 2 39 0 1982 166 55 8 chr2 231587278 231587658 -19100196 - MER65A LTR ERV1 -47 398 1 316 289 56 36 chr2 231587659 231587771 -19100083 + L1M4 LINE L1 3125 3233 -2913 5159 97 20 10 chr2 231587771 231588455 -19099399 + LTR8 LTR ERV1 1 691 0 316 289 56 36 chr2 231588455 231588647 -19099207 + L1M4 LINE L1 3233 3435 -2711 2279 118 0 0 chr2 231588779 231589085 -19098769 + AluSx SINE Alu 1 306 -6 896 108 8 15 chr2 231589559 231589689 -19098165 - LTR8 LTR ERV1 0 691 563 257 51 26 0 chr2 231589701 231589740 -19098114 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 4439 76 3 14 chr2 231589740 231590322 -19097532 - LTR8 LTR ERV1 -115 576 1 1202 188 9 0 chr2 231590562 231590780 -19097074 + AluJo SINE Alu 87 306 -6 2176 109 6 16 chr2 231590932 231591245 -19096609 + AluSx SINE Alu 1 310 -2 189 0 0 0 chr2 231591825 231591846 -19096008 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2223 97 0 0 chr2 231591849 231592137 -19095717 - AluSx SINE Alu -24 288 1 630 338 77 0 chr2 231592191 231592425 -19095429 - MIR SINE MIR -6 256 5 249 312 59 43 chr2 231592497 231592683 -19095171 - L2 LINE L2 -120 3193 3005 1955 114 14 4 chr2 231592712 231593016 -19094838 + AluSx SINE Alu 1 307 0 2494 36 0 16 chr2 231593277 231593581 -19094273 - AluY SINE Alu -12 299 1 4188 129 5 32 chr2 231593645 231594274 -19093580 - LTR9 LTR ERV1 0 612 1 635 289 185 31 chr2 231594277 231594731 -19093123 - L2 LINE L2 -654 2660 2137 1470 198 17 49 chr2 231595821 231596169 -19091685 - MLT1A1 LTR MaLR -2 363 27 822 191 0 0 chr2 231596208 231596339 -19091515 + FLAM_C SINE Alu 1 131 -2 360 148 0 0 chr2 231596339 231596400 -19091454 + (GA)n Simple_repeat Simple_repeat 1 61 0 342 0 0 0 chr2 231596401 231596439 -19091415 + (GGGGA)n Simple_repeat Simple_repeat 1 38 0 2414 68 3 0 chr2 231597699 231597993 -19089861 + AluSg SINE Alu 1 295 -15 352 226 131 29 chr2 231598452 231598589 -19089265 - MIR SINE MIR -92 170 20 556 272 194 0 chr2 231598940 231599157 -19088697 + LTR50 LTR ERVL 423 681 -114 787 195 8 0 chr2 231599163 231599286 -19088568 + AluJo/FLAM SINE Alu 2 125 -187 1835 96 28 8 chr2 231599288 231599538 -19088316 - AluSq SINE Alu -14 299 45 297 137 171 0 chr2 231599553 231599639 -19088215 + LTR50 LTR ERVL 425 795 0 1392 298 40 22 chr2 231599654 231600160 -19087694 - ERVL LTR ERVL -2894 2870 2356 2268 103 0 3 chr2 231600475 231600777 -19087077 + AluSp SINE Alu 1 301 -12 213 250 0 0 chr2 231601041 231601101 -19086753 + GA-rich Low_complexity Low_complexity 2 61 0 494 308 49 81 chr2 231601711 231601930 -19085924 - L2 LINE L2 0 3272 3060 2731 89 0 47 chr2 231601930 231602312 -19085542 - THE1B LTR MaLR 0 364 1 494 308 49 81 chr2 231602312 231602339 -19085515 - L2 LINE L2 -212 3060 3034 606 249 86 20 chr2 231602363 231602560 -19085294 - L2 LINE L2 -5 3308 3099 939 142 0 15 chr2 231602719 231602853 -19085001 - FLAM_C SINE Alu -1 132 1 549 309 84 69 chr2 231603016 231603345 -19084509 - L2 LINE L2 -422 2892 2554 2239 136 0 0 chr2 231603345 231603655 -19084199 - AluSx SINE Alu -2 310 1 549 309 84 69 chr2 231603655 231603743 -19084111 - L2 LINE L2 -760 2554 2469 305 294 59 7 chr2 231603925 231604072 -19083782 + MIR SINE MIR 1 151 -61 319 252 110 24 chr2 231604287 231604414 -19083440 + MER103 DNA DNA 11 148 -18 2211 125 0 3 chr2 231604516 231604812 -19083042 - AluSx SINE Alu -17 295 1 456 230 66 94 chr2 231605891 231606104 -19081750 - MIR SINE MIR -8 254 48 266 234 175 39 chr2 231606165 231606319 -19081535 + MIR3 SINE MIR 30 204 -4 2055 123 38 29 chr2 231606374 231606715 -19081139 + THE1B LTR MaLR 21 364 0 251 250 18 0 chr2 231607274 231607330 -19080524 + CT-rich Low_complexity Low_complexity 3 59 0 378 312 25 13 chr2 231607439 231607596 -19080258 + MARNA DNA Mariner 155 313 -273 2417 98 0 0 chr2 231608136 231608441 -19079413 - AluSg SINE Alu -5 305 1 215 278 198 16 chr2 231608726 231608852 -19079002 - L2 LINE L2 -1 3271 3123 2881 63 14 0 chr2 231608982 231609332 -19078522 - THE1A LTR MaLR 0 355 1 407 253 46 135 chr2 231609339 231609643 -19078211 - L2 LINE L2 -24 3289 3013 1527 106 32 0 chr2 231609750 231609968 -19077886 + L1PA10 LINE L1 5940 6164 -4 31 0 0 0 chr2 231609968 231609999 -19077855 + AT_rich Low_complexity Low_complexity 1 31 0 225 220 0 17 chr2 231610001 231610060 -19077794 + (TA)n Simple_repeat Simple_repeat 2 59 0 3536 182 33 81 chr2 231610403 231611228 -19076626 - LTR1 LTR ERV1 0 785 1 545 264 0 31 chr2 231611599 231611728 -19076126 - MER58 DNA MER1_type -90 125 1 1276 146 41 143 chr2 231612466 231612809 -19075045 - AluJo SINE Alu -4 308 1 307 291 32 5 chr2 231612968 231613126 -19074728 - MIR SINE MIR 0 262 28 1999 90 0 135 chr2 231613628 231613984 -19073870 - AluSq SINE Alu -5 308 1 2276 208 55 48 chr2 231614037 231614638 -19073216 - MER77 LTR ERV1 0 605 1 2192 124 0 3 chr2 231614696 231614994 -19072860 + AluSx SINE Alu 1 297 -15 188 245 75 38 chr2 231615322 231615428 -19072426 - L2 LINE L2 -214 3058 2949 228 111 0 0 chr2 231615817 231615853 -19072001 + (GA)n Simple_repeat Simple_repeat 1 36 0 2143 131 0 22 chr2 231616170 231616482 -19071372 + AluSx SINE Alu 1 305 -7 757 70 35 0 chr2 231616701 231616816 -19071038 + (GGAA)n Simple_repeat Simple_repeat 4 122 0 181 205 0 0 chr2 231617580 231617619 -19070235 - MIR SINE MIR -9 253 215 * 307 276 0 0 chr2 231617586 231617662 -19070192 - L2 LINE L2 -21 3292 3217 1314 157 15 122 chr2 231617905 231618032 -19069822 + AluYa8 SINE Alu 1 140 -170 2199 103 10 3 chr2 231618032 231618323 -19069531 - AluSq SINE Alu -20 293 1 1314 157 15 122 chr2 231618323 231618532 -19069322 + AluYa8 SINE Alu 140 301 -9 222 37 0 0 chr2 231618652 231618679 -19069175 + (CA)n Simple_repeat Simple_repeat 2 28 0 2234 121 0 3 chr2 231619117 231619423 -19068431 + AluSx SINE Alu 1 305 -7 437 232 268 14 chr2 231619448 231619668 -19068186 - Charlie8 DNA MER1_type -2140 277 2 436 264 94 16 chr2 231619910 231620211 -19067643 - MLT1J2 LTR MaLR -24 426 77 2150 102 0 11 chr2 231620313 231620632 -19067222 - AluSx SINE Alu 0 316 1 1605 165 16 55 chr2 231621315 231621624 -19066230 + AluJb SINE Alu 1 297 -15 25 0 0 0 chr2 231622155 231622180 -19065674 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 231622383 231622406 -19065448 + AT_rich Low_complexity Low_complexity 1 23 0 2329 89 6 29 chr2 231622530 231622843 -19065011 - AluSq SINE Alu -5 308 3 758 142 26 0 chr2 231623035 231623148 -19064706 + FLAM_C SINE Alu 3 118 -25 21 0 0 0 chr2 231623148 231623169 -19064685 + AT_rich Low_complexity Low_complexity 1 21 0 1645 170 3 46 chr2 231623710 231624016 -19063838 + AluJo SINE Alu 1 293 -19 21 36 0 0 chr2 231624125 231624153 -19063701 + AT_rich Low_complexity Low_complexity 1 28 0 2078 129 7 0 chr2 231624382 231624668 -19063186 + AluSx SINE Alu 1 288 -24 2394 91 3 0 chr2 231625283 231625581 -19062273 - AluSx SINE Alu -11 301 3 236 220 11 44 chr2 231625794 231625810 -19062044 + A-rich Low_complexity Low_complexity 1 16 -72 1953 118 7 4 chr2 231625810 231626081 -19061773 + AluSp SINE Alu 1 272 -41 236 220 11 44 chr2 231626081 231626155 -19061699 + A-rich Low_complexity Low_complexity 16 88 0 390 115 0 46 chr2 231626194 231626281 -19061573 + (GAAA)n Simple_repeat Simple_repeat 1 83 0 2218 106 3 13 chr2 231626763 231626937 -19060917 - AluSx SINE Alu -4 308 137 2329 92 0 3 chr2 231626937 231627232 -19060622 - AluSc SINE Alu -15 294 1 2218 106 3 13 chr2 231627232 231627368 -19060486 - AluSx SINE Alu -175 137 1 1980 98 55 4 chr2 231628800 231629075 -19058779 + AluSx SINE Alu 12 300 -12 2535 91 15 0 chr2 231629396 231629737 -19058117 - L1PA13 LINE L1 -2 6161 5816 719 227 178 0 chr2 231630411 231630636 -19057218 - MER69 DNA AcHobo -14 2512 2248 478 219 10 0 chr2 231630633 231630729 -19057125 - MER69 DNA AcHobo -2371 155 59 * 1613 164 11 11 chr2 231631210 231631484 -19056370 - AluJb SINE Alu -19 293 20 820 199 7 7 chr2 231631490 231631636 -19056218 - AluJo SINE Alu -166 146 1 2254 103 10 0 chr2 231631748 231632040 -19055814 - AluSg SINE Alu -14 296 2 2276 123 0 0 chr2 231632042 231632344 -19055510 - AluSx SINE Alu -8 304 3 2053 111 11 0 chr2 231633685 231633992 -19053862 - AluSx SINE Alu 0 310 1 977 186 15 100 chr2 231634650 231634919 -19052935 + MIR SINE MIR 17 262 0 204 40 0 0 chr2 231634930 231634955 -19052899 + (CAT)n Simple_repeat Simple_repeat 1 25 0 661 202 110 17 chr2 231635584 231635757 -19052097 - MER5A DNA MER1_type 0 189 1 1856 82 12 0 chr2 231635985 231636242 -19051612 - L1PA7 LINE L1 -773 5373 5114 5829 56 32 1 chr2 231636242 231636965 -19050889 + L1PA7 LINE L1 5401 6151 -3 193 232 18 18 chr2 231637212 231637268 -19050586 - L2 LINE L2 -67 3246 3191 255 262 224 0 chr2 231638216 231638323 -19049531 + L2 LINE L2 3142 3272 0 2285 120 0 0 chr2 231638348 231638648 -19049206 + AluSx SINE Alu 3 302 -10 374 226 80 80 chr2 231638861 231639138 -19048716 - L1P5 LINE L1 -354 5797 5513 300 295 22 50 chr2 231639181 231639320 -19048534 - L1ME LINE L1 -688 5433 5299 246 226 43 61 chr2 231639388 231639503 -19048351 + L1MC/D LINE L1 5800 5912 -1896 2670 29 7 3 chr2 231639510 231639817 -19048037 - AluY SINE Alu -3 308 1 306 0 0 0 chr2 231640271 231640305 -19047549 + (CA)n Simple_repeat Simple_repeat 2 35 0 846 164 14 0 chr2 231640501 231640641 -19047213 - AluSg/x SINE Alu -10 302 161 866 126 0 0 chr2 231642550 231642669 -19045185 - AluSq/x SINE Alu -194 119 1 1114 92 0 0 chr2 231642754 231642895 -19044959 + AluSq/x SINE Alu 1 141 -171 2366 93 0 37 chr2 231642895 231643217 -19044637 + AluSg SINE Alu 1 310 0 860 265 109 46 chr2 231643411 231643611 -19044243 + HAL1 LINE L1 751 937 -1570 219 69 0 0 chr2 231643611 231643640 -19044214 + (CA)n Simple_repeat Simple_repeat 2 30 0 860 265 109 46 chr2 231643640 231643816 -19044038 + HAL1 LINE L1 937 1100 -1407 649 175 70 0 chr2 231643816 231643930 -19043924 + FLAM_A SINE Alu 1 122 -11 860 265 109 46 chr2 231643930 231643982 -19043872 + HAL1 LINE L1 1100 1147 -1360 1724 171 17 3 chr2 231643982 231644274 -19043580 + AluJb SINE Alu 2 297 -15 860 265 109 46 chr2 231644274 231644542 -19043312 + HAL1 LINE L1 1147 1493 -1014 2231 111 3 10 chr2 231644657 231644955 -19042899 - AluSx SINE Alu -14 298 3 752 166 55 18 chr2 231645071 231645234 -19042620 - L1MA9 LINE L1 -34 6278 6110 * 11740 120 26 39 chr2 231645222 231645639 -19042215 + L1PA11 LINE L1 3268 3689 -2485 183 42 0 0 chr2 231645639 231645663 -19042191 + (CAA)n Simple_repeat Simple_repeat 3 26 0 11740 120 26 39 chr2 231645663 231648099 -19039755 + L1PA11 LINE L1 3689 6083 -91 616 115 74 8 chr2 231648102 231648224 -19039630 - L1MA9 LINE L1 -196 6116 5987 871 80 26 0 chr2 231648254 231648367 -19039487 - AluSq/x SINE Alu -197 116 1 425 145 0 0 chr2 231648728 231648804 -19039050 + Alu SINE Alu 235 310 -2 2114 99 27 7 chr2 231649398 231649690 -19038164 + AluSp SINE Alu 1 298 -15 478 323 35 35 chr2 231650034 231650291 -19037563 + MIR SINE MIR 6 262 0 2205 91 14 3 chr2 231650304 231650591 -19037263 + AluSq SINE Alu 1 290 -23 23 0 0 0 chr2 231650591 231650614 -19037240 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 231650880 231650902 -19036952 + AT_rich Low_complexity Low_complexity 1 22 0 2148 128 0 0 chr2 231651079 231651375 -19036479 - AluSq SINE Alu -17 296 1 315 246 49 122 chr2 231651610 231651898 -19035956 - Charlie8 DNA MER1_type -1015 1402 49 1979 113 4 14 chr2 231651905 231652208 -19035646 + AluSq SINE Alu 15 314 0 1786 185 85 70 chr2 231653107 231653201 -19034653 + MLT1C LTR MaLR 1 92 -375 2191 116 3 0 chr2 231653201 231653493 -19034361 + AluSq SINE Alu 1 293 -20 1786 185 85 70 chr2 231653493 231653620 -19034234 + MLT1C LTR MaLR 92 216 -251 399 21 0 0 chr2 231653620 231653668 -19034186 + (CA)n Simple_repeat Simple_repeat 2 49 0 1786 185 85 70 chr2 231653668 231653905 -19033949 + MLT1C LTR MaLR 216 467 0 1993 200 24 71 chr2 231654178 231654340 -19033514 + L1M4 LINE L1 3692 3860 -2286 2051 142 0 13 chr2 231654340 231654650 -19033204 + AluSx SINE Alu 1 306 -6 1993 200 24 71 chr2 231654650 231654672 -19033182 + L1M4 LINE L1 3860 3881 -2265 1616 178 14 11 chr2 231654672 231654953 -19032901 + AluJo SINE Alu 11 292 -20 1993 200 24 71 chr2 231654953 231655301 -19032553 + L1M4 LINE L1 3881 4200 -1946 586 282 94 14 chr2 231655548 231655761 -19032093 - MIR SINE MIR -31 231 2 1999 110 50 0 chr2 231655873 231656155 -19031699 - AluSx SINE Alu -16 296 1 2242 108 3 7 chr2 231656709 231657016 -19030838 - AluSq SINE Alu -7 306 1 2133 78 0 4 chr2 231658041 231658309 -19029545 + AluY SINE Alu 33 299 -12 1621 156 19 79 chr2 231658828 231659143 -19028711 + AluJb SINE Alu 1 296 -16 1962 135 3 14 chr2 231659568 231659864 -19027990 + AluSq SINE Alu 1 293 -20 2570 69 0 3 chr2 231660689 231660995 -19026859 - AluY SINE Alu -6 305 1 24 0 0 0 chr2 231661349 231661373 -19026481 + AT_rich Low_complexity Low_complexity 1 24 0 2032 156 3 3 chr2 231661396 231661704 -19026150 + AluJb SINE Alu 1 308 -4 2202 144 61 52 chr2 231661893 231662275 -19025579 + MSTA LTR MaLR 1 389 -39 1478 116 0 58 chr2 231662275 231662516 -19025338 - AluJb SINE Alu 0 312 86 2202 144 61 52 chr2 231662516 231662557 -19025297 + MSTA LTR MaLR 389 428 0 1751 160 38 0 chr2 231663135 231663423 -19024431 + AluJb SINE Alu 1 299 -13 443 230 121 46 chr2 231663476 231663774 -19024080 + L2 LINE L2 2644 3030 -283 2403 89 3 0 chr2 231663774 231664077 -19023777 + AluSx SINE Alu 1 304 -8 443 230 121 46 chr2 231664077 231664127 -19023727 + L2 LINE L2 3030 3075 -238 2385 93 3 0 chr2 231664136 231664437 -19023417 - AluSg SINE Alu -8 302 1 2018 145 14 0 chr2 231664724 231665020 -19022834 - AluJb SINE Alu -12 300 1 23 0 0 0 chr2 231665225 231665248 -19022606 + AT_rich Low_complexity Low_complexity 1 23 0 239 109 18 55 chr2 231665374 231665413 -19022441 - L1MB4 LINE L1 -3 6177 6139 484 104 13 0 chr2 231665413 231665490 -19022364 - L1PB3 LINE L1 0 6154 6077 239 109 18 55 chr2 231665490 231665505 -19022349 - L1MB4 LINE L1 -41 6139 6125 1294 106 6 6 chr2 231665507 231665686 -19022168 - AluSg/x SINE Alu -16 294 116 2244 114 3 3 chr2 231665695 231666002 -19021852 + AluSx SINE Alu 1 307 -5 243 98 24 0 chr2 231666002 231666043 -19021811 - L1M LINE L1 -838 5345 5304 2334 115 0 0 chr2 231666618 231666930 -19020924 - AluSx SINE Alu 0 312 1 1885 146 0 62 chr2 231667333 231667655 -19020199 - AluSx SINE Alu -10 302 1 825 226 52 5 chr2 231667799 231668011 -19019843 - MIR SINE MIR -23 239 18 1895 149 13 10 chr2 231669181 231669482 -19018372 - AluJo SINE Alu -10 302 1 654 189 9 69 chr2 231670122 231670244 -19017610 - MER6 DNA MER2_type -3 862 734 1685 184 11 0 chr2 231670244 231670526 -19017328 + AluJb SINE Alu 9 293 -19 654 189 9 69 chr2 231670526 231670628 -19017226 - MER6 DNA MER2_type -131 734 -65 2006 127 11 11 chr2 231671259 231671543 -19016311 + AluSx SINE Alu 6 289 -23 2416 94 3 0 chr2 231671735 231672043 -19015811 + AluSx SINE Alu 1 309 -3 1851 163 0 20 chr2 231672543 231672843 -19015011 + AluSx SINE Alu 1 294 -18 2300 104 0 3 chr2 231672964 231673262 -19014592 - AluSx SINE Alu -15 297 1 21 0 0 0 chr2 231674006 231674027 -19013827 + AT_rich Low_complexity Low_complexity 1 21 0 273 57 0 0 chr2 231675546 231675581 -19012273 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 2068 114 0 11 chr2 231675581 231675862 -19011992 - AluSg SINE Alu -32 278 1 252 296 86 37 chr2 231676277 231676439 -19011415 - MIR3 SINE MIR -9 199 30 1876 140 34 17 chr2 231676515 231676808 -19011046 + AluJo SINE Alu 1 298 -14 2299 95 3 0 chr2 231676810 231677139 -19010715 + AluSp SINE Alu 1 330 0 5847 141 16 25 chr2 231677146 231678299 -19009555 + L1MA8 LINE L1 5144 6289 -2 1539 185 40 37 chr2 231678413 231678710 -19009144 - AluJb SINE Alu -14 298 1 1948 120 25 0 chr2 231678958 231679242 -19008612 - AluSx SINE Alu -21 291 1 2534 49 0 13 chr2 231679435 231679741 -19008113 + AluY SINE Alu 1 302 -9 2063 125 3 0 chr2 231680143 231680431 -19007423 + AluSx SINE Alu 2 290 -22 2219 124 0 0 chr2 231680721 231681020 -19006834 + AluSx SINE Alu 4 302 -10 1155 162 0 0 chr2 231681059 231681232 -19006622 - AluSg/x SINE Alu -10 300 128 2018 147 0 10 chr2 231681794 231682093 -19005761 - AluSx SINE Alu -16 296 1 2186 107 3 0 chr2 231682207 231682497 -19005357 + AluSq SINE Alu 23 313 0 1357 104 0 0 chr2 231682700 231682873 -19004981 - AluSg/x SINE Alu -11 301 129 184 228 53 18 chr2 231683034 231683091 -19004763 + L2 LINE L2 3142 3200 -72 789 176 16 72 chr2 231683110 231683242 -19004612 + MER45A DNA AcHobo 1 121 -1460 2161 108 20 0 chr2 231683242 231683538 -19004316 - AluSg1 SINE Alu -7 302 1 789 176 16 72 chr2 231683538 231683593 -19004261 + MER45A DNA AcHobo 121 178 0 465 231 0 0 chr2 231683668 231683746 -19004108 + MER58A DNA MER1_type 4 81 -26 1049 123 0 0 chr2 231683749 231683887 -19003967 + AluSq/x SINE Alu 1 138 -175 563 108 0 10 chr2 231683887 231684043 -19003811 + AluSp SINE Alu 39 250 -63 1407 146 4 4 chr2 231684043 231684269 -19003585 + AluSg/x SINE Alu 83 308 -2 707 211 49 0 chr2 231684269 231684411 -19003443 + MER58A DNA MER1_type 76 224 0 2411 100 0 0 chr2 231684601 231684902 -19002952 + AluSx SINE Alu 1 301 -11 538 125 205 18 chr2 231685428 231685540 -19002314 - FLAM_C SINE Alu 0 133 1 1819 176 3 10 chr2 231685542 231685837 -19002017 - AluJb SINE Alu -19 293 1 2486 69 0 3 chr2 231686198 231686502 -19001352 + AluY SINE Alu 1 303 -8 441 0 0 0 chr2 231686539 231686588 -19001266 + (TG)n Simple_repeat Simple_repeat 2 50 0 189 0 0 0 chr2 231686756 231686777 -19001077 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 264 59 0 0 chr2 231687195 231687229 -19000625 + (T)n Simple_repeat Simple_repeat 1 34 0 387 0 0 0 chr2 231687645 231687688 -19000166 + (CATA)n Simple_repeat Simple_repeat 2 44 0 475 149 206 21 chr2 231688248 231688286 -18999568 - Charlie1b DNA MER1_type -2238 523 493 1875 95 4 0 chr2 231688286 231688561 -18999293 - AluSp SINE Alu 0 326 51 475 149 206 21 chr2 231688561 231688662 -18999192 - Charlie1b DNA MER1_type -2268 493 357 1162 173 18 18 chr2 231688665 231688714 -18999140 + AluJo SINE Alu 89 137 -175 1442 229 7 0 chr2 231688714 231689014 -18998840 + AluJb SINE Alu 3 304 0 1162 173 18 18 chr2 231689014 231689183 -18998671 + AluJo SINE Alu 136 308 -4 1806 188 11 14 chr2 231689184 231689545 -18998309 - Charlie1b DNA MER1_type -163 360 1 384 180 67 0 chr2 231689545 231689634 -18998220 - MIR SINE MIR -91 171 77 2358 96 0 0 chr2 231689779 231690071 -18997783 + AluSg SINE Alu 2 293 -17 2241 68 43 0 chr2 231690862 231691143 -18996711 + AluSx SINE Alu 2 294 -18 278 309 32 8 chr2 231691494 231691620 -18996234 + L2 LINE L2 3144 3272 0 22 0 0 0 chr2 231691623 231691645 -18996209 + GC_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 231691742 231691779 -18996075 + GC_rich Low_complexity Low_complexity 1 37 0 271 223 0 21 chr2 231692070 231692164 -18995690 + CT-rich Low_complexity Low_complexity 1 92 0 823 150 0 7 chr2 231692625 231692821 -18995033 - AluSg/x SINE Alu 0 329 135 2006 113 39 7 chr2 231693109 231693392 -18994462 + AluSx SINE Alu 1 292 -20 375 281 157 14 chr2 231693520 231693801 -18994053 - L2 LINE L2 -3 3310 2990 1943 122 51 0 chr2 231694327 231694623 -18993231 + AluSx SINE Alu 1 311 -1 2153 106 23 10 chr2 231694684 231694987 -18992867 + AluSq SINE Alu 1 307 -6 794 166 0 29 chr2 231695338 231695477 -18992377 + FLAM_C SINE Alu 2 136 -7 735 177 0 16 chr2 231695683 231695807 -18992047 - FLAM_C SINE Alu -20 123 2 264 113 75 0 chr2 231696601 231696654 -18991200 - L1ME4a LINE L1 -5 6116 6060 2087 148 7 0 chr2 231696678 231696988 -18990866 + AluSq SINE Alu 1 312 -1 2026 135 3 3 chr2 231697013 231697309 -18990545 + AluSx SINE Alu 1 296 -16 449 211 32 32 chr2 231697310 231697433 -18990421 - LTR48 LTR ERV1 -173 614 492 1478 122 31 9 chr2 231697577 231697799 -18990055 - AluSq SINE Alu -86 227 1 1946 123 4 7 chr2 231697832 231698135 -18989719 + AluSx SINE Alu 16 317 0 2377 97 0 0 chr2 231698588 231698896 -18988958 + AluSq SINE Alu 1 308 -5 225 300 0 12 chr2 231699017 231699097 -18988757 + MIR SINE MIR 103 181 -81 23 0 0 0 chr2 231699746 231699769 -18988085 + AT_rich Low_complexity Low_complexity 1 23 0 2144 109 0 0 chr2 231700846 231701177 -18986677 + AluSq SINE Alu 1 331 0 792 173 0 23 chr2 231702322 231702455 -18985399 + FLAM_C SINE Alu 1 130 -3 290 300 18 9 chr2 231703391 231703501 -18984353 + MIR SINE MIR 37 147 -61 272 298 0 61 chr2 231703552 231703666 -18984188 + MIR SINE MIR 26 132 -130 255 270 147 31 chr2 231703711 231703874 -18983980 + L2 LINE L2 3090 3271 -42 2167 117 3 7 chr2 231703877 231704176 -18983678 + AluSx SINE Alu 1 298 -14 2158 99 3 7 chr2 231704865 231705189 -18982665 - AluSq SINE Alu 0 313 1 1994 157 0 7 chr2 231705462 231705762 -18982092 - AluSx SINE Alu -14 298 1 849 109 0 0 chr2 231706035 231706145 -18981709 + FLAM_C SINE Alu 11 120 -23 2392 91 3 0 chr2 231706449 231706746 -18981108 + AluSp SINE Alu 1 298 -15 853 166 140 0 chr2 231706932 231707040 -18980814 - AluJb SINE Alu -59 253 161 297 0 0 0 chr2 231707040 231707073 -18980781 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 450 0 0 0 chr2 231707072 231707122 -18980732 + (GA)n Simple_repeat Simple_repeat 2 51 0 853 166 140 0 chr2 231707073 231707121 -18980733 - AluJb SINE Alu -151 161 121 360 0 0 0 chr2 231707121 231707161 -18980693 + (TG)n Simple_repeat Simple_repeat 2 41 0 853 166 140 0 chr2 231707161 231707209 -18980645 - AluJb SINE Alu -191 121 75 1511 155 8 27 chr2 231707236 231707494 -18980360 - AluJo SINE Alu -59 253 1 2574 139 17 36 chr2 231707545 231708013 -18979841 - L1PA16 LINE L1 0 6166 5708 813 153 0 0 chr2 231708217 231708335 -18979519 + FLAM_C SINE Alu 1 118 -25 182 36 0 36 chr2 231708340 231708368 -18979486 + (TAA)n Simple_repeat Simple_repeat 2 28 0 403 275 29 91 chr2 231708624 231708775 -18979079 - L3b LINE CR1 -201 1382 1254 2218 120 0 3 chr2 231708775 231709076 -18978778 - AluSx SINE Alu -12 300 1 403 275 29 91 chr2 231709076 231709200 -18978654 - L3b LINE CR1 -329 1254 1124 820 164 0 8 chr2 231711480 231711608 -18976246 + FLAM_C SINE Alu 1 127 -16 29 0 0 0 chr2 231711608 231711637 -18976217 + AT_rich Low_complexity Low_complexity 1 29 0 343 230 206 23 chr2 231711758 231711826 -18976028 + L1ME4a LINE L1 5817 5871 -250 2245 105 13 3 chr2 231711826 231712130 -18975724 + AluSq SINE Alu 1 307 -6 343 230 206 23 chr2 231712130 231712318 -18975536 + L1ME4a LINE L1 5871 6120 -1 884 140 6 41 chr2 231712489 231712660 -18975194 + L1MC1 LINE L1 5971 6135 -198 285 111 16 63 chr2 231712653 231712716 -18975138 + L1PA16 LINE L1 6107 6166 0 * 987 167 6 6 chr2 231712738 231712900 -18974954 + L1MC1 LINE L1 6163 6324 -9 742 174 30 15 chr2 231713237 231713369 -18974485 + AluJo SINE Alu 3 136 -176 1814 155 52 10 chr2 231713398 231713689 -18974165 + AluJb SINE Alu 1 303 -9 2699 117 36 14 chr2 231713690 231714109 -18973745 + MSTA LTR MaLR 1 428 0 1881 131 53 18 chr2 231714727 231715010 -18972844 - AluSx SINE Alu -19 293 1 1636 151 8 0 chr2 231715159 231715410 -18972444 - AluJb SINE Alu -59 253 1 1147 154 62 154 chr2 231715446 231715770 -18972084 + MLT1A1 LTR MaLR 1 283 -82 2321 99 0 7 chr2 231715770 231716072 -18971782 - AluSc SINE Alu -7 302 3 1147 154 62 154 chr2 231716072 231716149 -18971705 + MLT1A1 LTR MaLR 283 365 0 352 301 33 22 chr2 231716206 231716389 -18971465 - L2 LINE L2 -12 3301 3117 780 261 76 81 chr2 231716478 231716651 -18971203 + MLT1K LTR MaLR 94 266 -322 2331 110 0 0 chr2 231716651 231716950 -18970904 + AluSx SINE Alu 1 299 -13 780 261 76 81 chr2 231716950 231717198 -18970656 + MLT1K LTR MaLR 266 513 -75 2228 116 0 0 chr2 231717557 231717850 -18970004 + AluSx SINE Alu 1 293 -19 330 283 42 25 chr2 231717882 231718002 -18969852 - L2 LINE L2 -628 2686 2565 2170 104 3 13 chr2 231718048 231718347 -18969507 - AluSx SINE Alu -16 296 1 406 200 0 27 chr2 231718635 231718710 -18969144 - AluJ/FRAM SINE Alu -9 293 221 685 228 82 65 chr2 231718841 231719197 -18968657 + L2 LINE L2 1816 2177 -1137 4941 104 31 30 chr2 231719334 231720112 -18967742 - MER4E LTR ERV1 0 779 1 2343 130 34 14 chr2 231721007 231721362 -18966492 - THE1B LTR MaLR -2 362 1 2128 147 14 27 chr2 231721412 231721779 -18966075 + THE1B LTR MaLR 3 364 0 11587 91 25 4 chr2 231721779 231723326 -18964528 + THE1B-int LTR MaLR 1 1580 0 2359 124 8 24 chr2 231723326 231723696 -18964158 + THE1B LTR MaLR 1 364 0 1742 160 11 11 chr2 231723774 231724056 -18963798 - AluSx SINE Alu -29 283 2 1583 177 13 36 chr2 231724116 231724421 -18963433 - AluJb SINE Alu -14 298 1 2252 117 0 19 chr2 231725044 231725361 -18962493 + AluSx SINE Alu 1 311 -1 507 255 26 13 chr2 231725955 231726108 -18961746 + MIR SINE MIR 32 186 -76 2232 123 0 0 chr2 231726158 231726466 -18961388 - AluSx SINE Alu 0 312 5 2052 146 33 0 chr2 231726471 231726807 -18961047 + MER41B LTR ERV1 3 349 -286 1641 167 37 7 chr2 231726867 231727161 -18960693 + MER41B LTR ERV1 333 635 0 2028 142 3 7 chr2 231727305 231727608 -18960246 + AluSx SINE Alu 1 302 -10 755 158 0 43 chr2 231727904 231728043 -18959811 + FLAM_C SINE Alu 9 141 -2 324 301 68 15 chr2 231728399 231728532 -18959322 - MIR SINE MIR -110 152 13 639 245 6 6 chr2 231728888 231729051 -18958803 + MIR SINE MIR 90 252 -10 1821 156 0 28 chr2 231729060 231729349 -18958505 + AluJb SINE Alu 1 281 -31 2225 89 4 4 chr2 231729352 231729656 -18958198 - AluSc SINE Alu 0 304 1 22 0 0 0 chr2 231729752 231729774 -18958080 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 231730112 231730138 -18957716 + AT_rich Low_complexity Low_complexity 1 26 0 329 324 0 19 chr2 231730218 231730276 -18957578 - L2 LINE L2 -8 3305 3248 3047 101 26 5 chr2 231730276 231730701 -18957153 + MER57B LTR ERV1 1 434 0 329 324 0 19 chr2 231730701 231730750 -18957104 - L2 LINE L2 -65 3248 3200 1150 90 0 96 chr2 231730750 231730966 -18956888 + AluSp SINE Alu 125 323 0 1775 184 0 7 chr2 231731326 231731614 -18956240 - AluJb SINE Alu -26 286 1 2340 84 7 0 chr2 231731899 231732195 -18955659 - AluSp SINE Alu -15 298 1 246 81 0 0 chr2 231732506 231732543 -18955311 - Alu SINE Alu -2 297 261 1249 70 128 0 chr2 231732543 231732715 -18955139 + AluSg/x SINE Alu 108 301 -11 1923 167 3 0 chr2 231732985 231733285 -18954569 - AluJo SINE Alu -11 301 1 300 276 16 55 chr2 231733580 231733707 -18954147 - MIR SINE MIR -121 141 20 286 274 0 11 chr2 231733834 231733929 -18953925 + MIR SINE MIR 124 217 -45 2170 122 3 0 chr2 231734170 231734457 -18953397 - AluSq SINE Alu -25 288 1 220 27 54 0 chr2 231734458 231734495 -18953359 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 969 168 6 24 chr2 231734495 231734662 -18953192 - AluSg/x SINE Alu -28 284 121 2430 90 3 3 chr2 231734716 231735027 -18952827 - AluSp SINE Alu -2 311 1 243 250 0 0 chr2 231735028 231735080 -18952774 - THE1C LTR MaLR -1 427 376 * 1355 153 14 9 chr2 231735077 231735300 -18952554 - THE1C LTR MaLR -151 224 1 1794 105 0 0 chr2 231735358 231735587 -18952267 - AluSc SINE Alu -80 229 1 27 73 0 0 chr2 231736072 231736127 -18951727 + AT_rich Low_complexity Low_complexity 1 55 0 2077 140 0 3 chr2 231736398 231736698 -18951156 + AluJb SINE Alu 3 301 -11 519 151 0 0 chr2 231736729 231736829 -18951025 - AluSc SINE Alu 0 308 209 858 93 0 0 chr2 231736833 231736940 -18950914 - AluSq/x SINE Alu -206 107 1 236 151 0 19 chr2 231736994 231737047 -18950807 + CT-rich Low_complexity Low_complexity 3 54 0 2696 205 59 47 chr2 231737048 231737794 -18950060 + L1MC4 LINE L1 6406 7160 -882 917 171 18 6 chr2 231737794 231737964 -18949890 + AluJb SINE Alu 130 301 -11 742 181 0 0 chr2 231737971 231738087 -18949767 + FLAM_C SINE Alu 1 116 -17 485 238 87 0 chr2 231738171 231738297 -18949557 - MER96 DNA MER1_type? 0 175 39 865 208 0 22 chr2 231738508 231738794 -18949060 - AluJb SINE Alu 0 418 137 26 74 0 0 chr2 231739116 231739170 -18948684 + AT_rich Low_complexity Low_complexity 1 54 0 1644 142 63 0 chr2 231739553 231739807 -18948047 + AluJo SINE Alu 1 270 -42 270 0 0 0 chr2 231739819 231739849 -18948005 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 192 256 156 11 chr2 231739914 231740004 -18947850 + MIR SINE MIR 7 109 -153 986 225 134 66 chr2 231740091 231740578 -18947276 - MLT1F LTR MaLR -13 529 77 2335 78 0 50 chr2 231740578 231740898 -18946956 + AluY SINE Alu 1 304 -7 1532 177 40 57 chr2 231740906 231741206 -18946648 + AluJo SINE Alu 1 295 -17 986 225 134 66 chr2 231741206 231741240 -18946614 - MLT1F LTR MaLR -471 71 1 229 158 0 0 chr2 231741589 231741627 -18946227 - L2 LINE L2 -18 3295 3258 341 275 215 9 chr2 231741673 231741906 -18945948 - L2 LINE L2 -410 2904 2624 2465 87 0 0 chr2 231741918 231742216 -18945638 - AluSg SINE Alu -12 298 1 2025 146 73 36 chr2 231742216 231742743 -18945111 + MLT2A2 LTR ERVL 4 554 0 181 246 64 27 chr2 231742758 231742868 -18944986 - L2 LINE L2 -713 2601 2488 1975 162 0 0 chr2 231742998 231743320 -18944534 + AluSx SINE Alu 1 322 0 2088 126 3 0 chr2 231743870 231744163 -18943691 - AluSx SINE Alu -18 294 1 2099 125 14 0 chr2 231744608 231744904 -18942950 + AluSx SINE Alu 1 300 -12 3877 54 0 0 chr2 231744924 231745388 -18942466 + L1PA7 LINE L1 5678 6141 -13 335 261 35 14 chr2 231745685 231745827 -18942027 + L1ME4a LINE L1 5592 5736 -385 315 261 45 11 chr2 231746189 231746277 -18941577 - MLT1I LTR MaLR -270 139 49 239 299 111 9 chr2 231746304 231746521 -18941333 + L1ME4a LINE L1 5801 6039 -82 2234 92 23 3 chr2 231746561 231746867 -18940987 - AluSq SINE Alu -1 312 1 288 280 152 0 chr2 231747267 231747392 -18940462 + MIR SINE MIR 119 262 0 1904 153 0 10 chr2 231750998 231751292 -18936562 + AluJb SINE Alu 1 291 -21 23 78 0 0 chr2 231751362 231751413 -18936441 + AT_rich Low_complexity Low_complexity 1 51 0 1722 182 3 14 chr2 231751470 231751767 -18936087 + AluJb SINE Alu 1 294 -18 2295 119 0 0 chr2 231752421 231752724 -18935130 + AluSx SINE Alu 1 303 -9 2310 96 7 0 chr2 231753604 231753906 -18933948 + AluSx SINE Alu 1 304 -8 2312 98 0 0 chr2 231754214 231754509 -18933345 - AluSg SINE Alu -15 295 1 1880 164 0 17 chr2 231754826 231755125 -18932729 - AluJb SINE Alu -18 294 1 831 182 0 0 chr2 231755149 231755281 -18932573 - FLAM_C SINE Alu -1 132 1 24 32 0 0 chr2 231755719 231755750 -18932104 + AT_rich Low_complexity Low_complexity 1 31 0 2288 99 0 0 chr2 231755750 231756042 -18931812 - AluSx SINE Alu -20 292 1 22 0 0 0 chr2 231756227 231756249 -18931605 + AT_rich Low_complexity Low_complexity 1 22 0 1617 137 137 4 chr2 231756944 231757214 -18930640 - AluSg SINE Alu -4 306 1 1785 167 3 24 chr2 231757299 231757593 -18930261 - AluJb SINE Alu -24 288 1 2168 104 18 4 chr2 231758158 231758462 -18929392 + AluSx SINE Alu 1 308 0 2183 104 3 19 chr2 231758539 231758846 -18929008 + AluSq SINE Alu 1 302 -11 28 29 0 0 chr2 231758898 231758933 -18928921 + AT_rich Low_complexity Low_complexity 1 35 0 1579 158 58 7 chr2 231760186 231760464 -18927390 - AluJb SINE Alu -20 292 1 2375 90 3 3 chr2 231760683 231760984 -18926870 - AluSq SINE Alu -12 301 1 2267 123 0 0 chr2 231760998 231761300 -18926554 - AluSx SINE Alu -10 302 1 892 213 28 32 chr2 231761362 231761473 -18926381 + MIR SINE MIR 25 136 -126 2512 109 25 6 chr2 231761473 231761830 -18926024 + THE1B LTR MaLR 1 364 0 892 213 28 32 chr2 231761830 231761934 -18925920 + MIR SINE MIR 136 239 -23 322 291 102 15 chr2 231761944 231762142 -18925712 - MIR SINE MIR -36 226 15 1664 132 0 0 chr2 231762286 231762514 -18925340 + AluSx SINE Alu 1 228 -84 2110 119 0 23 chr2 231763190 231763492 -18924362 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr2 231764060 231764081 -18923773 + AT_rich Low_complexity Low_complexity 1 21 0 2124 105 11 3 chr2 231764085 231764371 -18923483 - AluSq SINE Alu -25 288 1 440 276 29 18 chr2 231765158 231765328 -18922526 + L1ME LINE L1 5558 5729 -392 1786 157 0 43 chr2 231765338 231765638 -18922216 + AluJo SINE Alu 8 294 -18 395 322 7 27 chr2 231765679 231765828 -18922026 - MIR3 SINE MIR -23 185 40 186 71 0 0 chr2 231766847 231766875 -18920979 + (CA)n Simple_repeat Simple_repeat 1 28 0 210 37 0 0 chr2 231767379 231767406 -18920448 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2235 114 10 3 chr2 231767972 231768280 -18919574 + AluSx SINE Alu 1 310 -2 2309 150 52 33 chr2 231769411 231769448 -18918406 + MSTA LTR MaLR 1 36 -392 360 0 0 0 chr2 231769448 231769488 -18918366 + (TA)n Simple_repeat Simple_repeat 2 41 0 2095 101 10 14 chr2 231769488 231769776 -18918078 - AluSx SINE Alu -25 287 1 2309 150 52 33 chr2 231769776 231770157 -18917697 + MSTA LTR MaLR 35 428 0 1944 150 3 20 chr2 231770490 231770796 -18917058 - AluSx SINE Alu -6 306 6 251 296 0 14 chr2 231771398 231771469 -18916385 - L2 LINE L2 0 3272 3203 2260 117 0 13 chr2 231771559 231771875 -18915979 + AluSx SINE Alu 1 312 0 482 118 0 59 chr2 231773086 231773171 -18914683 + MADE1 DNA Mariner 1 80 0 1853 149 0 17 chr2 231774376 231774678 -18913176 + AluJo SINE Alu 1 297 -15 54 0 0 0 chr2 231774847 231774901 -18912953 + AT_rich Low_complexity Low_complexity 1 54 0 2041 115 0 7 chr2 231775336 231775647 -18912207 + AluSx SINE Alu 1 309 0 1326 164 123 30 chr2 231775739 231776008 -18911846 - AluJo SINE Alu -10 302 9 2145 114 0 3 chr2 231776358 231776648 -18911206 - AluSx SINE Alu -21 291 3 267 287 40 40 chr2 231777269 231777419 -18910435 + L1ME LINE L1 5514 5663 -458 730 173 8 30 chr2 231777471 231777604 -18910250 + FLAM_C SINE Alu 1 130 -3 219 311 9 19 chr2 231777654 231777760 -18910094 + (CATATA)n Simple_repeat Simple_repeat 4 108 0 1941 103 84 0 chr2 231778632 231778917 -18908937 - AluSq SINE Alu 0 307 1 2050 129 0 7 chr2 231779041 231779374 -18908480 - AluSx SINE Alu 0 331 1 1830 169 17 3 chr2 231779951 231780253 -18907601 - AluJb SINE Alu -6 306 1 333 264 18 36 chr2 231781237 231781347 -18906507 - MER5A DNA MER1_type -32 157 50 794 315 136 15 chr2 231781444 231782123 -18905731 + L2 LINE L2 2078 2838 -476 4307 167 54 45 chr2 231782220 231783523 -18904331 + L1MB7 LINE L1 4860 6169 -15 254 253 107 0 chr2 231783554 231783629 -18904225 + MER5C DNA MER1_type 242 324 0 450 0 0 0 chr2 231783664 231783714 -18904140 + (CA)n Simple_repeat Simple_repeat 1 50 0 1830 162 10 7 chr2 231783916 231784212 -18903642 - AluJo SINE Alu -15 297 1 865 133 8 0 chr2 231785199 231785327 -18902527 + FLAM_C SINE Alu 5 133 0 2295 109 7 0 chr2 231786091 231786394 -18901460 - AluSx SINE Alu -7 305 1 564 221 41 0 chr2 231786595 231786717 -18901137 + MER58B DNA MER1_type 211 337 -4 238 310 58 0 chr2 231786782 231786869 -18900985 + MIR SINE MIR 94 185 -77 2375 91 3 0 chr2 231788913 231789211 -18898643 - AluSp SINE Alu -14 299 1 2185 114 7 0 chr2 231789679 231789969 -18897885 - AluSx SINE Alu -20 292 1 302 161 27 36 chr2 231790246 231790358 -18897496 + (TA)n Simple_repeat Simple_repeat 1 111 0 2410 84 0 10 chr2 231790444 231790752 -18897102 + AluY SINE Alu 1 305 -6 2231 113 0 0 chr2 231791317 231791608 -18896246 - AluSx SINE Alu -21 291 1 897 220 0 0 chr2 231791612 231791785 -18896069 - AluJb SINE Alu -17 295 123 418 274 95 42 chr2 231793121 231793289 -18894565 + L1ME2 LINE L1 5966 6142 -22 777 199 75 33 chr2 231793415 231793656 -18894198 + L1MC5 LINE L1 7322 7572 -389 1169 114 13 0 chr2 231793695 231793853 -18894001 - FRAM SINE Alu -17 159 1 2500 46 0 0 chr2 231795599 231795882 -18891972 + AluY SINE Alu 23 305 -6 2071 142 0 0 chr2 231796466 231796761 -18891093 - AluSx SINE Alu -17 295 1 14908 114 27 53 chr2 231797354 231798253 -18889601 - Tigger1 DNA MER2_type -8 2410 1489 1362 201 66 7 chr2 231798253 231798527 -18889327 - AluJb SINE Alu -21 291 2 14908 114 27 53 chr2 231798527 231798744 -18889110 - Tigger1 DNA MER2_type -929 1489 1268 255 61 0 0 chr2 231798744 231798777 -18889077 + (TG)n Simple_repeat Simple_repeat 2 34 0 1944 160 0 0 chr2 231798778 231799065 -18888789 - AluSx SINE Alu -25 287 1 14908 114 27 53 chr2 231799065 231800395 -18887459 - Tigger1 DNA MER2_type -1149 1269 24 2405 100 0 0 chr2 231801274 231801585 -18886269 - AluSq SINE Alu -2 311 1 23 0 0 0 chr2 231801739 231801762 -18886092 + AT_rich Low_complexity Low_complexity 1 23 0 1329 217 80 130 chr2 231802310 231802435 -18885419 + MLT1H LTR MaLR 1 131 -418 1945 91 0 4 chr2 231802435 231802689 -18885165 - AluSx SINE Alu -20 292 40 1329 217 80 130 chr2 231802689 231803140 -18884714 + MLT1H LTR MaLR 131 548 -1 2353 113 3 0 chr2 231803774 231804083 -18883771 - AluSx SINE Alu -2 310 1 2592 66 0 0 chr2 231804215 231804519 -18883335 - AluY SINE Alu -7 304 1 872 146 8 0 chr2 231805636 231805766 -18882088 + FLAM_C SINE Alu 1 131 -12 1850 147 7 23 chr2 231805772 231806079 -18881775 + AluJo SINE Alu 1 302 -10 2208 125 0 13 chr2 231806174 231806486 -18881368 - AluSx SINE Alu -2 310 3 2268 114 0 7 chr2 231806611 231806918 -18880936 - AluSq SINE Alu -8 305 1 191 296 28 0 chr2 231807073 231807144 -18880710 - L2 LINE L2 -257 3015 2943 1798 168 16 16 chr2 231808156 231808459 -18879395 - AluSx SINE Alu -9 303 1 2512 178 94 6 chr2 231808669 231809179 -18878675 + MER68 LTR ERV1 1 555 -7 825 219 133 26 chr2 231809541 231809774 -18878080 - MIR SINE MIR 0 262 5 1219 149 0 0 chr2 231810954 231811129 -18876725 - AluSg/x SINE Alu -14 296 122 1065 153 21 32 chr2 231811198 231811387 -18876467 + MER5A DNA MER1_type 3 189 0 958 181 71 38 chr2 231811425 231811545 -18876309 - MER20 DNA MER1_type -2 217 86 2126 147 33 28 chr2 231811545 231811906 -18875948 - THE1B LTR MaLR -1 363 1 958 181 71 38 chr2 231811906 231811995 -18875859 - MER20 DNA MER1_type -133 86 1 1898 86 0 0 chr2 231812148 231812380 -18875474 + AluSg SINE Alu 13 244 -66 320 285 15 73 chr2 231812392 231812529 -18875325 - MER46C DNA MER2_type -198 140 12 2273 98 0 41 chr2 231812735 231812917 -18874937 - AluSq SINE Alu -8 305 140 2400 96 3 0 chr2 231812917 231813219 -18874635 - AluSp SINE Alu -10 303 1 2273 98 0 41 chr2 231813219 231813354 -18874500 - AluSq SINE Alu -173 140 1 22 0 0 0 chr2 231813363 231813385 -18874469 + AT_rich Low_complexity Low_complexity 1 22 0 273 122 0 20 chr2 231813775 231813824 -18874030 - Alu SINE Alu -260 48 1 2400 75 3 0 chr2 231814321 231814615 -18873239 - AluY SINE Alu -16 295 1 2896 7 0 0 chr2 231814625 231814932 -18872922 - AluYb8 SINE Alu -11 307 1 2246 102 0 16 chr2 231814997 231815301 -18872553 + AluSx SINE Alu 1 299 -13 398 225 63 49 chr2 231816106 231816248 -18871606 - MER113 DNA MER1_type? -335 186 43 336 293 118 86 chr2 231816649 231817613 -18870241 - L1M2 LINE L1 -5470 1379 249 390 131 36 36 chr2 231817737 231817821 -18870033 - HsTC2 DNA Tc2 -1812 86 3 628 251 94 55 chr2 231817831 231817989 -18869865 - MIR SINE MIR -17 245 74 2410 183 209 0 chr2 231817989 231818497 -18869357 + MER90 LTR ERV1 1 614 0 628 251 94 55 chr2 231818497 231818573 -18869281 - MIR SINE MIR -188 74 2 1181 192 68 7 chr2 231818605 231818886 -18868968 + MER33 DNA MER1_type 24 321 -3 1972 136 10 7 chr2 231818904 231819205 -18868649 - AluSx SINE Alu 0 312 11 632 259 97 49 chr2 231819380 231819627 -18868227 - L2 LINE L2 -1 3312 3054 844 285 107 3 chr2 231819679 231820016 -18867838 + LTR16A LTR ERVL 79 450 0 1929 251 70 65 chr2 231820016 231820374 -18867480 - L2 LINE L2 -261 3052 2697 2089 120 7 10 chr2 231820374 231820665 -18867189 - AluSx SINE Alu -20 292 3 1929 251 70 65 chr2 231820665 231821049 -18866805 - L2 LINE L2 -616 2697 2316 207 0 0 0 chr2 231821049 231821072 -18866782 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2291 110 0 0 chr2 231821075 231821376 -18866478 - AluSx SINE Alu -11 301 1 1929 251 70 65 chr2 231821376 231821463 -18866391 - L2 LINE L2 -998 2315 2213 1193 269 28 12 chr2 231821723 231822050 -18865804 + MER93a LTR ERV1 63 394 -8 1757 178 0 13 chr2 231822050 231822353 -18865501 - AluSx SINE Alu -13 299 1 1717 160 24 3 chr2 231822356 231822649 -18865205 - AluSx SINE Alu -13 299 1 728 211 58 112 chr2 231822974 231823287 -18864567 - L2 LINE L2 -1089 2225 1930 424 122 14 0 chr2 231823401 231823475 -18864379 - L1PB1 LINE L1 0 6151 6077 2212 110 3 0 chr2 231823578 231823878 -18863976 - AluSx SINE Alu -11 301 1 904 255 150 58 chr2 231824165 231824644 -18863210 + LTR33A LTR ERVL 1 523 0 1795 172 96 32 chr2 231824677 231825054 -18862800 + MER57A LTR ERV1 1 401 -2 2276 112 0 0 chr2 231825231 231825527 -18862327 - AluSg SINE Alu -9 301 6 2355 224 47 34 chr2 231826442 231826977 -18860877 - MLT1F LTR MaLR 0 542 1 261 208 68 32 chr2 231830445 231830533 -18857321 - L1MC/D LINE L1 -507 5614 5532 537 101 38 0 chr2 231830748 231830826 -18857028 - MER2 DNA MER2_type -168 177 97 1084 152 102 0 chr2 231830826 231831023 -18856831 - Tigger1 DNA MER2_type 0 2418 2202 474 152 0 56 chr2 231831012 231831140 -18856714 - Tigger1 DNA MER2_type -2261 157 1 * 605 155 21 10 chr2 231831140 231831237 -18856617 - MER2 DNA MER2_type -247 98 1 301 307 88 26 chr2 231832304 231832418 -18855436 + L2 LINE L2 3151 3271 -1 238 209 45 60 chr2 231833140 231833207 -18854647 - L2 LINE L2 -1 3271 3206 676 219 73 17 chr2 231833519 231833697 -18854157 + MER5A DNA MER1_type 1 188 -1 1679 177 32 0 chr2 231834144 231834427 -18853427 - AluJb SINE Alu -20 292 1 279 0 0 0 chr2 231834538 231834569 -18853285 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 2046 131 0 19 chr2 231834787 231835100 -18852754 - AluSx SINE Alu -4 308 2 1641 183 13 17 chr2 231835261 231835561 -18852293 + AluJo SINE Alu 1 299 -13 24 32 0 0 chr2 231835820 231835851 -18852003 + AT_rich Low_complexity Low_complexity 1 31 0 247 282 106 0 chr2 231836914 231836999 -18850855 + L2 LINE L2 3170 3263 -9 236 304 130 9 chr2 231837004 231837119 -18850735 + L1ME LINE L1 5724 5852 -269 717 176 40 0 chr2 231837961 231838086 -18849768 - FLAM_C SINE Alu -2 141 12 1875 60 23 49 chr2 231838086 231838352 -18849502 + AluY SINE Alu 40 298 -13 2259 114 0 0 chr2 231839334 231839632 -18848222 - AluSx SINE Alu -14 298 1 2203 98 3 10 chr2 231840428 231840723 -18847131 - AluSg SINE Alu -17 293 1 2152 165 69 38 chr2 231840907 231841326 -18846528 + Tigger2a DNA MER2_type 2 433 -1 189 74 0 0 chr2 231841643 231841670 -18846184 + (C)n Simple_repeat Simple_repeat 1 27 0 675 193 26 0 chr2 231843644 231843758 -18844096 + FLAM_C SINE Alu 2 118 -25 647 146 209 0 chr2 231844255 231844365 -18843489 - FLAM_C SINE Alu 0 133 1 1276 158 8 42 chr2 231845375 231845615 -18842239 + AluJo SINE Alu 47 278 -34 592 185 126 8 chr2 231845718 231845837 -18842017 + FLAM_C SINE Alu 1 133 0 2400 90 0 0 chr2 231846072 231846372 -18841482 + AluSx SINE Alu 3 302 -10 787 182 8 0 chr2 231846648 231846780 -18841074 + FLAM_C SINE Alu 10 142 -1 201 108 0 0 chr2 231846816 231846853 -18841001 + (A)n Simple_repeat Simple_repeat 1 37 0 219 36 0 0 chr2 231847419 231847447 -18840407 + (CAA)n Simple_repeat Simple_repeat 2 29 0 910 218 34 19 chr2 231848115 231848250 -18839604 + MER3 DNA MER1_type 1 142 -67 2205 116 0 3 chr2 231848250 231848551 -18839303 - AluSx SINE Alu -12 300 1 910 218 34 19 chr2 231848551 231848621 -18839233 + MER3 DNA MER1_type 142 209 0 238 326 62 7 chr2 231848705 231848849 -18839005 - MIR SINE MIR 0 262 111 2010 162 61 17 chr2 231848932 231849291 -18838563 + THE1C LTR MaLR 1 375 0 252 200 31 138 chr2 231849961 231850091 -18837763 + MIR SINE MIR 147 262 0 2260 94 10 0 chr2 231850140 231850428 -18837426 - AluSx SINE Alu -21 291 1 1434 169 130 52 chr2 231850882 231851244 -18836610 + MLT1B LTR MaLR 1 390 0 781 151 8 0 chr2 231851266 231851385 -18836469 + MER45A DNA AcHobo 59 178 0 968 235 36 23 chr2 231851958 231852179 -18835675 + MER58A DNA MER1_type 1 224 0 215 312 16 56 chr2 231852225 231852350 -18835504 + L2 LINE L2 3153 3272 0 373 237 184 9 chr2 231852855 231852969 -18834885 - MIR3 SINE MIR -9 199 66 454 216 10 0 chr2 231853503 231853600 -18834254 - MER5A DNA MER1_type -83 106 9 2614 120 12 20 chr2 231854184 231854583 -18833271 + L1PB3 LINE L1 5757 6152 -2 2149 120 0 3 chr2 231855360 231855652 -18832202 - AluSg SINE Alu -19 291 1 207 0 0 0 chr2 231855794 231855817 -18832037 + (CA)n Simple_repeat Simple_repeat 1 23 0 309 51 0 0 chr2 231855826 231855865 -18831989 + (TG)n Simple_repeat Simple_repeat 2 40 0 630 240 34 77 chr2 231857401 231857634 -18830220 - L1MA9 LINE L1 0 6291 6069 212 303 133 24 chr2 231857679 231857844 -18830010 - MIR SINE MIR -21 241 59 211 281 0 0 chr2 231858200 231858257 -18829597 + GA-rich Low_complexity Low_complexity 1 57 0 613 314 48 0 chr2 231859135 231859342 -18828512 + MIR SINE MIR 25 241 -21 1632 180 3 10 chr2 231860277 231860566 -18827288 - AluJo SINE Alu -20 292 6 203 326 58 0 chr2 231860602 231860688 -18827166 - L2 LINE L2 -989 2325 2235 262 219 83 31 chr2 231860793 231860889 -18826965 + L1MC/D LINE L1 5627 5727 -2081 682 294 119 11 chr2 231861919 231862297 -18825557 - LTR33 LTR ERVL -3 518 100 1805 177 0 0 chr2 231862795 231863083 -18824771 + AluJb SINE Alu 1 288 -24 249 314 51 8 chr2 231863429 231863547 -18824307 - L1MC/D LINE L1 -2267 5541 5419 1133 102 12 6 chr2 231864759 231864925 -18822929 + L1MA6 LINE L1 6134 6300 0 1927 139 0 41 chr2 231864931 231865247 -18822607 + AluJo SINE Alu 3 305 -7 345 47 0 0 chr2 231865630 231865673 -18822181 + (TG)n Simple_repeat Simple_repeat 2 44 0 244 260 86 116 chr2 231866111 231866403 -18821451 + L2 LINE L2 2981 3263 -9 224 100 25 0 chr2 231866557 231866597 -18821257 + (TCCA)n Simple_repeat Simple_repeat 2 42 0 833 235 26 81 chr2 231866842 231867114 -18820740 - MIR SINE MIR 0 262 6 2360 243 47 51 chr2 231867495 231868200 -18819654 + MER20B DNA MER1_type 82 783 0 224 309 124 23 chr2 231868278 231868412 -18819442 - MIR3 SINE MIR -48 160 13 289 319 66 50 chr2 231868624 231868806 -18819048 - MER5A DNA MER1_type -1 188 4 1917 154 0 0 chr2 231868894 231869199 -18818655 + AluJo SINE Alu 1 305 -7 2087 122 3 0 chr2 231869308 231869619 -18818235 - AluSx SINE Alu 0 312 1 1667 162 14 3 chr2 231870535 231870825 -18817029 + AluJb SINE Alu 1 293 -19 3503 53 12 0 chr2 231872633 231873065 -18814789 - L1PA8 LINE L1 -15 6157 5721 949 255 124 10 chr2 231873066 231873372 -18814482 - L1MD2 LINE L1 -13 6346 6006 21 0 0 0 chr2 231874035 231874056 -18813798 + AT_rich Low_complexity Low_complexity 1 21 0 2076 130 0 0 chr2 231874077 231874376 -18813478 - AluSx SINE Alu -13 299 1 1665 141 39 29 chr2 231874585 231874891 -18812963 - AluSx SINE Alu -3 309 1 840 298 106 39 chr2 231874920 231875482 -18812372 - L2 LINE L2 -1 3312 2722 26 30 0 0 chr2 231875549 231875582 -18812272 + AT_rich Low_complexity Low_complexity 1 33 0 489 45 72 9 chr2 231877086 231877197 -18810657 + (TA)n Simple_repeat Simple_repeat 1 118 0 183 405 9 17 chr2 231878256 231878372 -18809482 + L2 LINE L2 2200 2314 -1000 302 266 142 52 chr2 231878783 231879016 -18808838 + Charlie8 DNA MER1_type 19 272 -2145 1006 214 149 63 chr2 231879458 231880009 -18807845 - L1MC5 LINE L1 -34 7927 7330 284 120 60 0 chr2 231880009 231880059 -18807795 + MER58B DNA MER1_type 1 53 -288 * 492 234 55 69 chr2 231880046 231880191 -18807663 + MER58B DNA MER1_type 197 339 -2 1623 229 52 62 chr2 231880196 231880824 -18807030 - L1MC5 LINE L1 -627 7334 6713 1938 156 0 0 chr2 231881512 231881819 -18806035 + AluSx SINE Alu 1 307 -5 372 330 76 35 chr2 231882702 231882899 -18804955 + MIR SINE MIR 52 256 -6 315 272 84 37 chr2 231883733 231883924 -18803930 + L1ME4a LINE L1 5536 5735 -386 594 220 66 16 chr2 231884201 231884383 -18803471 + LTR16A1 LTR ERVL 265 455 -2 304 275 87 20 chr2 231884383 231884532 -18803322 + L1ME4a LINE L1 5746 5904 -217 1331 71 0 0 chr2 231884550 231884718 -18803136 + AluYa5 SINE Alu 130 297 -14 250 285 108 8 chr2 231884719 231884849 -18803005 + L1ME4a LINE L1 5949 6091 -30 232 296 0 0 chr2 231885213 231885267 -18802587 + L2 LINE L2 3203 3256 -16 1933 148 3 0 chr2 231886192 231886502 -18801352 + AluSx SINE Alu 1 311 -1 240 212 197 0 chr2 231886683 231886749 -18801105 - MER20 DNA MER1_type 0 219 141 238 314 29 10 chr2 231886900 231887002 -18800852 - L2 LINE L2 -1 3312 3209 464 173 8 90 chr2 231887025 231887158 -18800696 + MER20 DNA MER1_type 4 125 -94 * 610 154 13 74 chr2 231887145 231887294 -18800560 + MER20 DNA MER1_type 80 219 0 196 295 39 39 chr2 231887536 231887614 -18800240 - L2 LINE L2 -340 2974 2897 5219 178 42 56 chr2 231887857 231888317 -18799537 + L1MD2 LINE L1 5102 5567 -792 2166 102 0 20 chr2 231888317 231888622 -18799232 + AluSq SINE Alu 1 299 -14 5219 178 42 56 chr2 231888622 231889419 -18798435 + L1MD2 LINE L1 5567 6343 -16 577 352 15 0 chr2 231889685 231889881 -18797973 + MIR SINE MIR 27 225 -37 31 0 0 0 chr2 231890690 231890721 -18797133 + AT_rich Low_complexity Low_complexity 1 31 0 180 284 176 46 chr2 231890783 231891044 -18796810 + L2 LINE L2 2365 2659 -655 1345 154 7 77 chr2 231891179 231891478 -18796376 - MER44D DNA MER2_type -8 601 54 190 253 32 63 chr2 231891511 231891606 -18796248 + L2 LINE L2 2883 2974 -339 186 263 9 158 chr2 231891632 231891746 -18796108 + L2 LINE L2 3216 3312 -1 28 0 0 0 chr2 231891850 231891878 -18795976 + AT_rich Low_complexity Low_complexity 1 28 0 963 217 28 23 chr2 231891898 231892115 -18795739 - MER20 DNA MER1_type 0 219 2 1909 139 7 13 chr2 231893846 231893977 -18793877 + AluSx SINE Alu 4 134 -178 2554 52 0 0 chr2 231893977 231894282 -18793572 + AluY SINE Alu 1 305 -6 1909 139 7 13 chr2 231894282 231894452 -18793402 + AluSx SINE Alu 134 303 -9 2177 132 16 24 chr2 231894847 231895225 -18792629 + THE1C LTR MaLR 1 375 0 289 235 116 43 chr2 231896643 231896781 -18791073 + MIR SINE MIR 45 186 -63 191 222 32 48 chr2 231897174 231897237 -18790617 - MIR SINE MIR -120 142 81 1010 296 70 28 chr2 231898003 231898429 -18789425 + MLT1J1 LTR MaLR 3 446 0 317 190 127 0 chr2 231899710 231899789 -18788065 - MER97c DNA MER1_type? -959 131 43 410 307 52 23 chr2 231900393 231900561 -18787293 - MIR SINE MIR -58 150 5 292 333 93 0 chr2 231900722 231900830 -18787024 + MIR SINE MIR 113 230 -32 1845 128 14 3 chr2 231901796 231902084 -18785770 - AluSx SINE Alu -9 303 13 267 302 75 71 chr2 231902546 231902758 -18785096 - MIR SINE MIR -41 221 9 274 276 20 20 chr2 231903562 231903660 -18784194 + MLT1K LTR MaLR 131 228 -360 * 300 301 0 0 chr2 231903654 231903737 -18784117 + MLT1K LTR MaLR 146 228 -360 * 406 276 76 92 chr2 231903731 231904166 -18783688 + MLT1K LTR MaLR 146 573 -15 25 0 0 0 chr2 231905348 231905373 -18782481 + AT_rich Low_complexity Low_complexity 1 25 0 259 277 0 0 chr2 231905595 231905660 -18782194 - MIR3 SINE MIR -31 177 113 180 232 32 53 chr2 231906396 231906491 -18781363 - L2 LINE L2 -288 3025 2933 282 272 72 72 chr2 231907417 231907470 -18780384 - Charlie8 DNA MER1_type -121 209 157 1996 108 50 0 chr2 231907470 231907767 -18780087 - AluSx SINE Alu 0 312 1 282 272 72 72 chr2 231907767 231907838 -18780016 - Charlie8 DNA MER1_type -172 158 85 1558 55 18 37 chr2 231908528 231908746 -18779108 + L1PA7 LINE L1 5941 6154 0 402 291 68 48 chr2 231909089 231909295 -18778559 + L2 LINE L2 3101 3310 -3 23 92 0 0 chr2 231911108 231911173 -18776681 + GC_rich Low_complexity Low_complexity 1 65 0 223 233 0 17 chr2 231911434 231911494 -18776360 + (CCCCG)n Simple_repeat Simple_repeat 1 59 0 606 279 85 68 chr2 231912581 231912947 -18774907 + L2 LINE L2 2941 3312 -1 786 175 12 6 chr2 231913236 231913396 -18774458 - L1MD1 LINE L1 0 6242 6082 263 219 31 16 chr2 231915828 231915892 -18771962 + LTR67 LTR ERVL 493 557 0 304 319 129 42 chr2 231915923 231916157 -18771697 + L2 LINE L2 2226 2438 -876 2102 94 0 7 chr2 231916157 231916617 -18771237 - AluSx SINE Alu 0 458 1 304 319 129 42 chr2 231916617 231916854 -18771000 + L2 LINE L2 2438 2739 -575 719 238 99 18 chr2 231916908 231917131 -18770723 + MIR SINE MIR 12 252 -10 829 215 83 139 chr2 231917320 231917355 -18770499 - MLT1H LTR MaLR 0 549 514 2208 100 3 0 chr2 231917355 231917655 -18770199 - AluSq SINE Alu -12 301 1 829 215 83 139 chr2 231917655 231918118 -18769736 - MLT1H LTR MaLR -35 514 86 1545 163 38 116 chr2 231918118 231918363 -18769491 - MLT1B LTR MaLR 0 390 190 2293 129 0 0 chr2 231918363 231918674 -18769180 - AluSx SINE Alu -1 311 1 1545 163 38 116 chr2 231918674 231918851 -18769003 - MLT1B LTR MaLR -200 190 1 829 215 83 139 chr2 231918851 231918932 -18768922 - MLT1H LTR MaLR -463 86 2 271 267 124 38 chr2 231919086 231919191 -18768663 + L2 LINE L2 3199 3312 -1 484 229 24 86 chr2 231919315 231919525 -18768329 + MIR SINE MIR 21 217 -45 2012 161 55 3 chr2 231919603 231919950 -18767904 + MLT1A1 LTR MaLR 1 365 0 752 120 0 0 chr2 231919974 231920074 -18767780 - AluJ/FLAM SINE Alu -211 101 2 195 382 13 0 chr2 231920131 231920207 -18767647 - MIR3 SINE MIR -50 158 82 222 351 66 0 chr2 231920274 231920425 -18767429 + MIR SINE MIR 56 216 -46 1616 177 20 17 chr2 231920958 231921257 -18766597 + AluJo SINE Alu 2 301 -11 6155 144 10 18 chr2 231921370 231923268 -18764586 - L1MA5 LINE L1 0 6300 4425 210 250 19 0 chr2 231923452 231923504 -18764350 + CT-rich Low_complexity Low_complexity 1 53 0 869 270 9 0 chr2 231923530 231923752 -18764102 + MIR SINE MIR 16 239 -23 2388 164 114 149 chr2 231924163 231924689 -18763165 - L1MD3 LINE L1 -5 7990 7447 332 259 71 0 chr2 231924689 231924774 -18763080 - MLT1F1 LTR MaLR -442 125 35 2388 164 114 149 chr2 231924774 231925207 -18762647 - L1MD3 LINE L1 -548 7447 6732 2582 68 0 0 chr2 231925207 231925518 -18762336 + AluY SINE Alu 1 311 0 2388 164 114 149 chr2 231925518 231925562 -18762292 - L1MD3 LINE L1 -1263 6732 6688 1269 294 127 14 chr2 231925966 231926477 -18761377 + MLT1L LTR MaLR 47 615 0 1867 151 102 6 chr2 231927201 231927533 -18760321 - THE1B LTR MaLR 0 364 1 348 206 155 10 chr2 231927560 231927657 -18760197 + MLT1J2 LTR MaLR 67 177 -273 384 152 106 0 chr2 231927843 231927904 -18759950 - MLT1C LTR MaLR 0 467 400 2568 161 35 7 chr2 231927904 231928338 -18759516 - MER7C DNA MER2_type 0 602 157 1362 158 0 19 chr2 231928315 231928530 -18759324 - MER6 DNA MER2_type -654 211 1 * 1031 183 6 0 chr2 231928530 231928702 -18759152 - MER7C DNA MER2_type -428 174 2 1344 232 44 37 chr2 231928703 231928947 -18758907 - MLT1C LTR MaLR -66 401 145 2543 134 30 16 chr2 231928947 231929373 -18758481 - MSTB1 LTR MaLR 0 432 1 1344 232 44 37 chr2 231929373 231929520 -18758334 - MLT1C LTR MaLR -322 145 1 1917 155 9 49 chr2 231929540 231929889 -18757965 - MER1B DNA MER1_type 0 337 3 2429 122 28 14 chr2 231930885 231931239 -18756615 - THE1B LTR MaLR -5 359 1 447 364 37 0 chr2 231932433 231932650 -18755204 + MIR SINE MIR 8 232 -30 310 354 60 14 chr2 231933006 231933221 -18754633 + L3b LINE CR1 1153 1377 -206 402 21 0 0 chr2 231934088 231934135 -18753719 + (TG)n Simple_repeat Simple_repeat 2 48 0 628 234 76 119 chr2 231935162 231935664 -18752190 - MLT1H LTR MaLR 0 549 1 1974 109 44 7 chr2 231935984 231936259 -18751595 - AluSx SINE Alu -27 285 1 199 341 55 0 chr2 231936763 231936854 -18751000 + MIR SINE MIR 58 153 -109 242 0 0 57 chr2 231937635 231937670 -18750184 + (TGG)n Simple_repeat Simple_repeat 1 33 0 4115 138 5 1 chr2 231938515 231939166 -18748688 - L1PA15 LINE L1 0 6165 5513 2363 89 35 6 chr2 231939166 231939504 -18748350 + L1PA10 LINE L1 5817 6164 -4 246 89 222 0 chr2 231939507 231939552 -18748302 - L1PA15 LINE L1 -636 5525 5471 818 275 80 34 chr2 231939602 231939945 -18747909 - L2 LINE L2 -7 3306 2924 572 206 118 6 chr2 231939945 231940115 -18747739 - MER53 DNA DNA 0 189 1 818 275 80 34 chr2 231940115 231940335 -18747519 - L2 LINE L2 -389 2924 2716 188 293 17 0 chr2 231940969 231941027 -18746827 + L2 LINE L2 3210 3268 -4 1243 201 132 53 chr2 231941417 231941850 -18746004 - MLT1C LTR MaLR 0 467 1 1343 308 45 13 chr2 231941958 231942422 -18745432 + LTR16C LTR ERVL 4 482 -9 212 270 16 16 chr2 231942544 231942607 -18745247 - MIR SINE MIR -64 144 82 237 150 33 50 chr2 231942612 231942672 -18745182 - MLT1C LTR MaLR -5 462 404 962 311 31 47 chr2 231942760 231942979 -18744875 - LTR16A LTR ERVL -9 441 231 1945 126 51 3 chr2 231942979 231943272 -18744582 - AluSg SINE Alu -3 307 1 962 311 31 47 chr2 231943272 231943476 -18744378 - LTR16A LTR ERVL -219 231 25 616 335 62 30 chr2 231943809 231944368 -18743486 - ERVL LTR ERVL -301 5079 4534 814 271 20 44 chr2 231944494 231944745 -18743109 - LTR16A LTR ERVL -146 304 60 1301 182 30 4 chr2 231945790 231946021 -18741833 - LTR32 LTR ERVL -222 249 13 523 204 105 33 chr2 231946021 231946202 -18741652 - HERVL32 LTR ERVL 0 3418 3225 2296 119 40 8 chr2 231946404 231946757 -18741097 - THE1B LTR MaLR 0 364 1 6922 246 81 62 chr2 231947173 231948193 -18739661 - HERVL32 LTR ERVL -209 3209 2209 2803 106 34 0 chr2 231948193 231948607 -18739247 + MSTA LTR MaLR 1 428 0 6922 246 81 62 chr2 231948607 231949651 -18738203 - HERVL32 LTR ERVL -1209 2209 1088 3526 138 98 21 chr2 231949651 231950317 -18737537 - LTR62 LTR ERVK -2 717 1 6922 246 81 62 chr2 231950317 231950779 -18737075 - HERVL32 LTR ERVL -2330 1088 636 1226 268 35 18 chr2 231950852 231951195 -18736659 - HERVL32 LTR ERVL -3069 349 1 774 196 28 0 chr2 231951199 231951342 -18736512 - LTR32 LTR ERVL 0 471 325 1713 169 32 32 chr2 231951393 231951658 -18736196 - LTR32 LTR ERVL -119 352 85 2084 139 169 5 chr2 231951658 231952026 -18735828 + MSTA LTR MaLR 1 428 0 1713 169 32 32 chr2 231952026 231952098 -18735756 - LTR32 LTR ERVL -385 86 15 358 257 62 121 chr2 231952338 231952676 -18735178 + L2 LINE L2 2955 3272 0 226 173 180 25 chr2 231952747 231952828 -18735026 + MIR SINE MIR 58 152 -56 395 318 141 9 chr2 231955080 231955413 -18732441 - L2 LINE L2 -39 3274 2898 2172 132 3 3 chr2 231955428 231955738 -18732116 + AluSx SINE Alu 3 312 0 267 54 0 0 chr2 231955851 231955888 -18731966 + (TG)n Simple_repeat Simple_repeat 2 38 0 210 143 0 0 chr2 231956097 231956132 -18731722 + (A)n Simple_repeat Simple_repeat 1 35 0 785 282 100 71 chr2 231956458 231956948 -18730906 + MLT1K LTR MaLR 59 562 -26 369 43 0 0 chr2 231956953 231957000 -18730854 + (CA)n Simple_repeat Simple_repeat 2 48 0 24 53 0 0 chr2 231958620 231958658 -18729196 + AT_rich Low_complexity Low_complexity 1 38 0 2627 88 131 2 chr2 231959452 231959849 -18728005 - LTR7 LTR ERV1 -2 448 1 2870 99 9 14 chr2 231959849 231960282 -18727572 - HERVH LTR ERV1 0 7713 7283 19585 152 54 59 chr2 231960286 231965202 -18722652 - HERVH LTR ERV1 -2693 5020 1 2638 88 123 25 chr2 231965204 231965612 -18722242 - LTR7 LTR ERV1 -2 448 1 377 250 148 61 chr2 231966203 231966399 -18721455 - MIR SINE MIR 0 262 50 2031 218 15 28 chr2 231966706 231967174 -18720680 + MLT1C LTR MaLR 6 467 0 1556 147 26 8 chr2 231969260 231969528 -18718326 - AluJb SINE Alu 0 307 35 2329 116 0 0 chr2 231969856 231970167 -18717687 + AluSx SINE Alu 1 311 -1 1720 149 65 0 chr2 231972837 231973112 -18714742 - AluSx SINE Alu -19 293 1 183 42 0 0 chr2 231973177 231973201 -18714653 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 257 341 12 12 chr2 231973329 231973411 -18714443 + MIR SINE MIR 20 101 -161 4716 46 0 6 chr2 231973541 231974087 -18713767 - L1PA6 LINE L1 -11 6143 5601 464 303 43 83 chr2 231974449 231974773 -18713081 - L2 LINE L2 0 3313 3003 22 35 0 0 chr2 231975544 231975573 -18712281 + AT_rich Low_complexity Low_complexity 1 29 0 226 245 245 0 chr2 231975717 231975819 -18712035 + MER103 DNA DNA 38 164 -2 326 315 47 8 chr2 231976704 231976831 -18711023 - L2 LINE L2 0 3313 3182 585 61 0 0 chr2 231977956 231978038 -18709816 + (TTCC)n Simple_repeat Simple_repeat 1 82 0 525 262 99 56 chr2 231978243 231978263 -18709591 + MIR SINE MIR 8 26 -236 387 111 56 28 chr2 231978263 231978335 -18709519 + L1PB4 LINE L1 6083 6156 0 525 262 99 56 chr2 231978335 231978443 -18709411 + MIR SINE MIR 26 128 -134 189 0 0 0 chr2 231978443 231978464 -18709390 + (TAA)n Simple_repeat Simple_repeat 1 21 0 525 262 99 56 chr2 231978464 231978567 -18709287 + MIR SINE MIR 128 250 -12 948 257 27 51 chr2 231978833 231978933 -18708921 - L1MA9 LINE L1 -28 6284 6183 2827 114 53 15 chr2 231978933 231979345 -18708509 - MSTA LTR MaLR 0 428 1 948 257 27 51 chr2 231979345 231979579 -18708275 - L1MA9 LINE L1 -129 6183 5958 773 196 83 61 chr2 231979691 231979920 -18707934 - MLT1A1 LTR MaLR 0 365 132 1202 90 37 32 chr2 231979932 231980120 -18707734 + AluSx SINE Alu 8 196 -116 555 329 98 23 chr2 231981759 231982066 -18705788 + MER102b DNA MER1_type 1 330 -11 562 294 80 10 chr2 231982112 231982356 -18705498 - MIR SINE MIR 0 262 3 1430 183 96 51 chr2 231983537 231983601 -18704253 + MLT1A2 LTR MaLR 1 61 -313 2301 122 39 33 chr2 231983601 231983963 -18703891 + THE1B LTR MaLR 1 364 0 1430 183 96 51 chr2 231983963 231984253 -18703601 + MLT1A2 LTR MaLR 61 371 -3 325 245 163 0 chr2 231984306 231984404 -18703450 + L2 LINE L2 3191 3304 -9 940 183 33 7 chr2 231984448 231984601 -18703253 - FAM SINE Alu -17 158 2 24 53 0 0 chr2 231984869 231984907 -18702947 + AT_rich Low_complexity Low_complexity 1 38 0 270 208 0 0 chr2 231985101 231985154 -18702700 + L2 LINE L2 3261 3313 0 1116 262 28 0 chr2 231985532 231985822 -18702032 + MLT1H LTR MaLR 1 298 -251 232 200 50 0 chr2 231985832 231985872 -18701982 + MLT1H LTR MaLR 261 302 -228 268 185 0 0 chr2 231986811 231986865 -18700989 - MER119 DNA MER1_type -114 469 416 1758 220 68 5 chr2 231987985 231988385 -18699469 - MER119 DNA MER1_type -158 425 1 1625 198 0 3 chr2 231988561 231988849 -18699005 - AluJo SINE Alu -21 291 5 1010 209 100 64 chr2 231988956 231989267 -18698587 - L1ME3 LINE L1 -64 6098 5777 301 266 64 39 chr2 231989384 231989587 -18698267 - L1ME3A LINE L1 -218 5952 5745 539 262 95 45 chr2 231990199 231990420 -18697434 - MIR SINE MIR -16 246 15 317 262 92 21 chr2 231990635 231990776 -18697078 - MIR SINE MIR -6 256 106 185 327 177 9 chr2 231990750 231990863 -18696991 - MIR3 SINE MIR -76 132 1 * 333 274 65 39 chr2 231991339 231991492 -18696362 + MLT1K LTR MaLR 186 342 -246 1613 225 201 24 chr2 231991552 231992227 -18695627 - LTR50 LTR ERVL 0 795 1 1351 129 43 5 chr2 231992280 231992490 -18695364 - MER20 DNA MER1_type -1 218 1 541 230 13 26 chr2 231992619 231992771 -18695083 - MIR SINE MIR -8 254 105 318 179 30 0 chr2 231992893 231992960 -18694894 - MER116 DNA Mariner -4 76 8 2260 152 29 8 chr2 231993090 231993472 -18694382 - MLT1B LTR MaLR 0 390 1 2189 106 11 0 chr2 231993557 231993841 -18694013 - AluSc SINE Alu -22 287 1 180 111 0 0 chr2 231993854 231993881 -18693973 + (TA)n Simple_repeat Simple_repeat 1 27 0 199 143 0 0 chr2 231994700 231994735 -18693119 - L2 LINE L2 -5 3308 3274 527 281 111 5 chr2 231994817 231995034 -18692820 + MIR SINE MIR 2 241 -21 21 36 0 0 chr2 231995086 231995114 -18692740 + AT_rich Low_complexity Low_complexity 1 28 0 1974 182 12 6 chr2 231995437 231995778 -18692076 - MLT1A1 LTR MaLR 0 365 23 184 277 62 0 chr2 231996174 231996239 -18691615 + L2 LINE L2 3232 3300 -13 1936 141 69 30 chr2 231996259 231996620 -18691234 - THE1C LTR MaLR 0 375 1 186 280 100 60 chr2 231996620 231996720 -18691134 - L2 LINE L2 -45 3227 3124 207 0 0 0 chr2 231996729 231996752 -18691102 + (CA)n Simple_repeat Simple_repeat 1 23 0 839 135 0 8 chr2 231997387 231997513 -18690341 - AluSp SINE Alu -188 125 1 1858 122 0 0 chr2 231997525 231997788 -18690066 - L1PA14 LINE L1 -1 6160 5898 551 177 9 18 chr2 231997788 231997901 -18689953 - MLT1A1 LTR MaLR -253 112 1 229 255 85 53 chr2 231997901 231997995 -18689859 - MIR SINE MIR -80 128 32 1882 136 10 43 chr2 231998189 231998490 -18689364 - AluSx SINE Alu -21 291 1 499 293 110 11 chr2 231998493 231998684 -18689170 + MIR SINE MIR 37 246 -16 368 245 230 7 chr2 231999234 231999373 -18688481 + MER5A DNA MER1_type 7 176 -13 1743 141 3 69 chr2 232001483 232001802 -18686052 - AluJb SINE Alu -13 299 2 248 235 29 29 chr2 232003142 232003210 -18684644 - L2 LINE L2 -1 3271 3204 839 241 41 22 chr2 232003826 232004096 -18683758 - LTR48B LTR ERV1 -4 640 366 719 46 0 0 chr2 232004622 232004709 -18683145 - AluY SINE Alu -7 304 218 1546 65 0 0 chr2 232004709 232004894 -18682960 - AluY SINE Alu -126 185 1 298 344 23 23 chr2 232006181 232006312 -18681542 + MIR SINE MIR 19 149 -59 277 351 83 5 chr2 232006316 232006489 -18681365 + MIR SINE MIR 8 191 -63 2191 116 66 33 chr2 232006879 232007242 -18680612 - THE1C LTR MaLR 0 375 1 318 237 217 29 chr2 232007335 232007542 -18680312 - L1ME4a LINE L1 -8 6113 5868 2704 160 27 38 chr2 232007561 232008086 -18679768 - L1MB5 LINE L1 -28 6146 5628 603 250 12 6 chr2 232008084 232008256 -18679598 - L1ME4a LINE L1 -240 5881 5709 * 378 282 129 20 chr2 232008287 232008489 -18679365 - MIR SINE MIR -12 250 27 293 159 196 47 chr2 232009407 232009514 -18678340 - L2 LINE L2 0 3313 3191 1353 184 43 4 chr2 232009644 232009900 -18677954 + MLT1D LTR MaLR 240 505 0 1918 276 121 34 chr2 232009900 232010745 -18677109 - L2 LINE L2 -2370 944 27 1451 200 160 18 chr2 232012366 232012766 -18675088 + MSTB2 LTR MaLR 1 457 0 528 293 91 13 chr2 232013380 232013776 -18674078 + L1ME4a LINE L1 5677 6103 -18 309 100 0 0 chr2 232013877 232013927 -18673927 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 225 0 0 0 chr2 232013957 232013982 -18673872 + (TAGA)n Simple_repeat Simple_repeat 4 28 0 246 261 0 0 chr2 232013982 232014047 -18673807 + L1P LINE L1 5049 5113 -1033 1740 88 21 0 chr2 232014047 232014287 -18673567 - L1PB3 LINE L1 -109 6045 5801 2381 117 51 20 chr2 232014289 232014640 -18673214 - THE1B LTR MaLR -2 362 1 200 200 0 0 chr2 232015082 232015117 -18672737 + L3 LINE CR1 1541 1575 -2 186 294 152 33 chr2 232016197 232016289 -18671565 + MER5B DNA MER1_type 76 178 0 289 274 137 0 chr2 232016504 232016599 -18671255 + MIR SINE MIR 30 137 -125 1074 248 89 33 chr2 232017562 232017953 -18669901 - MLT1J LTR MaLR -9 502 90 2095 175 94 10 chr2 232018057 232018452 -18669402 + MSTA LTR MaLR 1 428 0 417 349 62 32 chr2 232018683 232019021 -18668833 - L2 LINE L2 -21 3251 2904 2325 219 24 42 chr2 232019582 232020134 -18667720 + MLT1F LTR MaLR 1 542 0 413 293 141 76 chr2 232020253 232020443 -18667411 - L2 LINE L2 -14 3299 3123 585 170 188 0 chr2 232020443 232020555 -18667299 + FLAM_A SINE Alu 1 133 0 413 293 141 76 chr2 232020555 232020797 -18667057 - L2 LINE L2 -190 3123 2839 1894 196 181 134 chr2 232022621 232023176 -18664678 + MLT1E2 LTR MaLR 1 561 -65 8749 189 63 5 chr2 232023176 232025542 -18662312 + L1PA15 LINE L1 3729 6164 -1 1894 196 181 134 chr2 232025542 232025603 -18662251 + MLT1E2 LTR MaLR 561 618 -8 2261 191 54 19 chr2 232025655 232026137 -18661717 - MLT1D LTR MaLR 0 505 7 344 266 0 0 chr2 232026455 232026534 -18661320 - MER5B DNA MER1_type -99 79 1 221 191 9 165 chr2 232026539 232026597 -18661257 + MER5A DNA MER1_type 74 107 -82 1880 179 72 17 chr2 232026597 232026943 -18660911 - MLT1A1 LTR MaLR 0 365 1 221 191 9 165 chr2 232026943 232026999 -18660855 + MER5A DNA MER1_type 107 170 -19 2180 46 11 0 chr2 232027519 232027781 -18660073 + AluY SINE Alu 33 297 -14 754 295 88 24 chr2 232028696 232029174 -18658680 - L1ME4a LINE L1 -292 5829 5316 1931 116 60 3 chr2 232029406 232029690 -18658164 - AluSg SINE Alu -10 300 1 749 272 74 8 chr2 232030001 232030244 -18657610 - MIR SINE MIR -1 261 3 249 256 0 26 chr2 232030884 232030962 -18656892 + MER34 LTR ERV1 21 96 -446 280 0 0 0 chr2 232030991 232031021 -18656833 + LTR29 LTR ERV1 158 187 -435 334 238 179 13 chr2 232031071 232031222 -18656632 + LTR48B LTR ERV1 145 320 -324 288 271 146 71 chr2 232031681 232032031 -18655823 + MLT1K LTR MaLR 207 582 -6 24 32 0 0 chr2 232032544 232032575 -18655279 + AT_rich Low_complexity Low_complexity 1 31 0 1807 168 3 32 chr2 232032979 232033295 -18654559 - AluJb SINE Alu -5 307 1 1926 154 13 0 chr2 232033647 232033952 -18653902 - AluJb SINE Alu -3 309 1 2518 163 23 16 chr2 232034072 232034501 -18653353 - MSTB1 LTR MaLR 0 432 1 1596 142 142 31 chr2 232036205 232036349 -18651505 - MLT1A1 LTR MaLR -4 361 234 2517 135 75 8 chr2 232036349 232036750 -18651104 + MSTA LTR MaLR 1 428 0 1596 142 142 31 chr2 232036750 232036929 -18650925 - MLT1A1 LTR MaLR -131 234 2 285 333 0 37 chr2 232037147 232037282 -18650572 - MER5A DNA MER1_type -9 180 51 762 125 0 0 chr2 232038732 232038844 -18649010 + L1MA5A LINE L1 6181 6292 -5 291 259 171 44 chr2 232038970 232039128 -18648726 + MIR SINE MIR 69 246 -16 187 284 108 0 chr2 232039145 232039219 -18648635 - L2 LINE L2 -50 3222 3141 717 304 71 72 chr2 232040331 232041190 -18646664 - L2 LINE L2 -707 2607 1750 703 137 46 46 chr2 232041455 232041586 -18646268 - THE1B LTR MaLR -233 131 1 334 95 0 0 chr2 232041586 232041625 -18646229 + THE1A LTR MaLR 317 355 0 517 324 214 23 chr2 232042170 232042861 -18644993 - L2 LINE L2 -2276 1038 216 618 297 19 106 chr2 232043118 232043579 -18644275 + L2 LINE L2 2851 3271 -1 229 282 14 42 chr2 232045148 232045219 -18642635 + MIR3 SINE MIR 110 178 -30 1853 242 68 64 chr2 232045273 232045831 -18642023 - MLT1H1 LTR MaLR 0 555 1 4918 66 5 2 chr2 232046661 232047250 -18640604 + LTR10C LTR ERV1 1 591 0 563 254 107 11 chr2 232047710 232047887 -18639967 + MIR SINE MIR 53 246 -16 220 231 0 0 chr2 232047853 232047892 -18639962 + L2 LINE L2 3258 3296 -17 * 431 165 0 24 chr2 232048005 232048090 -18639764 + MER45A DNA AcHobo 96 178 0 2298 95 0 10 chr2 232048455 232048751 -18639103 + AluSq SINE Alu 1 293 -20 665 290 221 18 chr2 232049302 232049794 -18638060 + L2 LINE L2 2710 3313 0 378 246 124 49 chr2 232050421 232050767 -18637087 + MLT1H LTR MaLR 50 386 -23 921 144 185 0 chr2 232051104 232051277 -18636577 - MER3 DNA MER1_type -1 208 4 221 331 274 12 chr2 232052345 232052768 -18635086 + L2 LINE L2 884 1417 -1897 1552 214 48 19 chr2 232052781 232053155 -18634699 + MLT1B LTR MaLR 6 390 0 273 387 54 4 chr2 232053278 232053539 -18634315 + L2 LINE L2 1581 1854 -1460 328 265 94 51 chr2 232053567 232053862 -18633992 - MLT1G1 LTR MaLR 0 595 224 623 234 66 0 chr2 232053903 232054070 -18633784 - MLT1G LTR MaLR -1 589 412 2187 104 80 9 chr2 232054137 232054474 -18633380 + THE1C LTR MaLR 15 375 0 324 70 0 0 chr2 232054521 232054564 -18633290 + (GA)n Simple_repeat Simple_repeat 1 43 0 615 302 183 11 chr2 232054654 232055025 -18632829 + L2 LINE L2 2202 2636 -678 1313 269 82 21 chr2 232055383 232055848 -18632006 - L2 LINE L2 -4 3309 2817 197 228 35 18 chr2 232056036 232056093 -18631761 + MIR SINE MIR 193 250 -12 393 227 256 23 chr2 232056136 232056312 -18631542 + MIR SINE MIR 46 262 0 565 265 29 63 chr2 232056463 232056701 -18631153 + L2 LINE L2 3083 3312 -1 189 74 0 0 chr2 232058037 232058064 -18629790 + (TGGGGG)n Simple_repeat Simple_repeat 1 27 0 3882 116 14 11 chr2 232060121 232060682 -18627172 - L1PA13 LINE L1 0 6163 5601 481 319 144 16 chr2 232060866 232061306 -18626548 - L2 LINE L2 -2 3311 2670 654 133 26 0 chr2 232061331 232061444 -18626410 + MER53 DNA DNA 23 138 -51 2126 120 17 0 chr2 232061647 232061939 -18625915 - AluSx SINE Alu -15 297 1 189 74 0 0 chr2 232062100 232062127 -18625727 + (CA)n Simple_repeat Simple_repeat 2 28 0 1866 177 40 53 chr2 232062493 232062888 -18624966 - MLT1B LTR MaLR 0 390 1 3208 79 5 9 chr2 232063139 232063580 -18624274 - LTR7 LTR ERV1 -11 439 1 810 213 40 80 chr2 232063876 232064117 -18623737 - MLT1A2 LTR MaLR -4 386 174 2224 112 0 0 chr2 232064117 232064402 -18623452 - AluSx SINE Alu -27 285 1 810 213 40 80 chr2 232064402 232064570 -18623284 - MLT1A2 LTR MaLR -216 174 1 2227 152 36 0 chr2 232064745 232065074 -18622780 + MER61A LTR ERV1 3 343 0 190 185 138 92 chr2 232065399 232065529 -18622325 - L2 LINE L2 -104 3209 3074 824 190 56 11 chr2 232065536 232065715 -18622139 - MLT1B LTR MaLR 0 390 204 642 244 194 30 chr2 232065801 232066187 -18621667 - L2 LINE L2 -216 3097 2638 619 303 95 47 chr2 232066280 232066732 -18621122 + MLT1G1 LTR MaLR 77 550 -45 298 298 204 27 chr2 232066732 232066957 -18620897 + L2 LINE L2 2649 2913 -401 277 195 12 12 chr2 232067012 232067094 -18620760 + CT-rich Low_complexity Low_complexity 4 85 0 210 37 0 0 chr2 232067232 232067259 -18620595 + (GA)n Simple_repeat Simple_repeat 2 28 0 2133 215 43 7 chr2 232067545 232067982 -18619872 - MLT1E2 LTR MaLR 0 626 174 3514 115 4 2 chr2 232067982 232068477 -18619377 + MER75 DNA T2_type 1 496 -18 2819 28 0 3 chr2 232068477 232068795 -18619059 - AluYb8 SINE Alu 0 318 2 618 330 43 29 chr2 232069987 232070210 -18617644 + L2 LINE L2 2880 3109 -204 2093 143 3 0 chr2 232070210 232070518 -18617336 - AluSx SINE Alu -3 309 1 618 330 43 29 chr2 232070518 232070570 -18617284 + L2 LINE L2 3109 3159 -154 1076 201 150 11 chr2 232072346 232072711 -18615143 + L1ME3A LINE L1 5713 6155 -9 1110 242 36 51 chr2 232072837 232073253 -18614601 - MLT2B1 LTR ERVL -56 464 1 18164 154 28 14 chr2 232073253 232077081 -18610773 - ERVL-B1 LTR ERVL -7 5757 1760 505 214 10 0 chr2 232077081 232077184 -18610670 - MLT2B1 LTR ERVL -416 104 1 463 202 79 44 chr2 232077184 232077298 -18610556 + MLT1E LTR MaLR 5 122 -532 2152 154 55 18 chr2 232077303 232077685 -18610169 - MER61B LTR ERV1 -29 396 1 487 203 114 31 chr2 232077701 232077792 -18610062 + MLT1E LTR MaLR 130 212 -412 2376 89 0 0 chr2 232077792 232078094 -18609760 + AluSc SINE Alu 1 302 -7 487 203 114 31 chr2 232078094 232078206 -18609648 + MLT1E LTR MaLR 212 361 -263 * 716 124 6 4 chr2 232078175 232078302 -18609552 + MLT1E LTR MaLR 499 593 0 297 307 53 13 chr2 232078665 232078815 -18609039 + L1ME LINE L1 5574 5729 -392 23 33 0 0 chr2 232078839 232078869 -18608985 + AT_rich Low_complexity Low_complexity 1 30 0 3590 275 53 46 chr2 232079006 232080547 -18607307 + L1PBa LINE L1 3 1553 -5310 6459 162 31 7 chr2 232080554 232082329 -18605525 + L1P5 LINE L1 1 1821 -4383 2394 135 125 10 chr2 232082329 232082713 -18605141 + MSTA LTR MaLR 1 428 0 10316 109 56 11 chr2 232082715 232084225 -18603629 + MSTA-int LTR MaLR 3 1580 0 2018 136 102 37 chr2 232084225 232084577 -18603277 + THE1C LTR MaLR 1 375 0 1835 151 115 57 chr2 232084577 232084960 -18602894 + MSTA LTR MaLR 24 428 0 13793 212 35 11 chr2 232084960 232086637 -18601217 + L1P5 LINE L1 1817 3452 -2759 216 0 0 0 chr2 232086637 232086661 -18601193 + (CAA)n Simple_repeat Simple_repeat 1 24 0 13793 212 35 11 chr2 232086661 232088626 -18599228 + L1P5 LINE L1 3452 5551 -660 475 276 73 16 chr2 232138778 232138970 -18548884 + MIR SINE MIR 5 207 -55 1074 179 25 68 chr2 232138989 232139313 -18548541 + MER33 DNA MER1_type 13 322 -2 244 273 0 0 chr2 232139477 232139532 -18548322 - MIR SINE MIR -7 255 201 677 337 139 56 chr2 232140698 232141867 -18545987 + L2 LINE L2 1710 2976 -338 2914 101 5 27 chr2 232141961 232142405 -18545449 - MER57B LTR ERV1 0 434 1 492 130 40 10 chr2 232142990 232143090 -18544764 - MER106A DNA MER1_type -15 221 119 2235 116 0 0 chr2 232144785 232145086 -18542768 + AluSx SINE Alu 1 301 -11 852 136 17 17 chr2 232145399 232145576 -18542278 + L1MA7 LINE L1 6114 6290 -1 2030 146 7 10 chr2 232146805 232147114 -18540740 + AluJo SINE Alu 1 308 -4 225 0 0 0 chr2 232147292 232147317 -18540537 + (CA)n Simple_repeat Simple_repeat 2 26 0 1865 203 80 5 chr2 232148123 232148337 -18539517 + MLT2B1 LTR ERVL 1 198 -322 771 101 0 0 chr2 232148337 232148456 -18539398 + (TC)n Simple_repeat Simple_repeat 2 120 0 1865 203 80 5 chr2 232148456 232148667 -18539187 + MLT2B1 LTR ERVL 198 392 -128 432 0 0 0 chr2 232148667 232148715 -18539139 + (TA)n Simple_repeat Simple_repeat 1 48 0 * 534 54 0 0 chr2 232148714 232148788 -18539066 + (GA)n Simple_repeat Simple_repeat 2 75 0 1865 203 80 5 chr2 232148715 232148800 -18539054 + MLT2B1 LTR ERVL 392 472 -48 600 107 0 0 chr2 232149017 232149120 -18538734 + (GA)n Simple_repeat Simple_repeat 2 104 0 505 155 10 0 chr2 232149760 232149857 -18537997 + Ricksha DNA DNA 8 105 -1149 7884 132 60 22 chr2 232149860 232150092 -18537762 + Ricksha DNA DNA 1714 1936 -1331 587 136 9 18 chr2 232150092 232150202 -18537652 - L1PA15 LINE L1 -2 6163 6055 7884 132 60 22 chr2 232150202 232151489 -18536365 + Ricksha DNA DNA 1936 3254 -13 185 272 58 68 chr2 232151648 232151751 -18536103 - MIR3 SINE MIR -2 206 105 238 367 117 17 chr2 232152222 232152342 -18535512 - L2 LINE L2 -9 3263 3132 355 328 0 83 chr2 232152726 232152918 -18534936 + MER5B DNA MER1_type 2 177 -1 219 366 118 38 chr2 232153777 232154091 -18533763 - L2 LINE L2 -15 3257 2919 257 267 27 0 chr2 232154125 232154200 -18533654 + MIR SINE MIR 81 157 -105 2184 95 0 0 chr2 232154204 232154478 -18533376 + AluSg SINE Alu 1 274 -36 2020 137 10 7 chr2 232154500 232154800 -18533054 + AluSx SINE Alu 1 301 -11 281 244 188 88 chr2 232156364 232156474 -18531380 - MER5A DNA MER1_type -7 182 50 2225 108 0 22 chr2 232156474 232156789 -18531065 - AluSx SINE Alu -4 308 1 281 244 188 88 chr2 232156789 232156838 -18531016 - MER5A DNA MER1_type -139 50 7 415 270 44 7 chr2 232157592 232157729 -18530125 + MIR SINE MIR 51 192 -70 2417 83 0 0 chr2 232157731 232158031 -18529823 + AluY SINE Alu 1 300 -11 402 310 35 7 chr2 232158199 232158341 -18529513 + MIR SINE MIR 10 155 -107 483 16 0 0 chr2 232159996 232160057 -18527797 - L1PA6 LINE L1 -1 6153 6093 1857 25 0 4 chr2 232160057 232160292 -18527562 + L1PA5 LINE L1 5842 6075 -79 690 245 23 9 chr2 232160712 232160930 -18526924 + L1MC4a LINE L1 7547 7808 0 2538 69 0 0 chr2 232162325 232162629 -18525225 - AluY SINE Alu -7 304 1 298 273 0 0 chr2 232162825 232162902 -18524952 + MIR SINE MIR 186 262 0 2200 112 0 3 chr2 232163549 232163853 -18524001 - AluSq SINE Alu -10 303 1 1277 236 57 8 chr2 232163904 232164273 -18523581 + MER101 LTR ERV1 88 474 0 1377 220 55 60 chr2 232164273 232164727 -18523127 + MLT1C LTR MaLR 7 458 -9 1010 227 61 71 chr2 232164971 232165398 -18522456 + L1MD2 LINE L1 5936 7785 0 1900 169 0 0 chr2 232168225 232168515 -18519339 + AluJo SINE Alu 1 290 -22 279 312 96 16 chr2 232168569 232168694 -18519160 + MLT1K LTR MaLR 14 148 -440 242 279 160 51 chr2 232168839 232169076 -18518778 + MLT1K LTR MaLR 319 581 -7 473 339 54 79 chr2 232169083 232169360 -18518494 - L2 LINE L2 -27 3245 2976 25 65 0 0 chr2 232169538 232169584 -18518270 + AT_rich Low_complexity Low_complexity 1 46 0 267 273 30 30 chr2 232169751 232169850 -18518004 + MIR3 SINE MIR 99 197 -11 515 309 136 33 chr2 232170143 232170593 -18517261 - MARNA DNA Mariner -11 575 80 1505 94 27 5 chr2 232170632 232170855 -18516999 - L1PA11 LINE L1 0 6174 5947 1597 183 50 39 chr2 232170920 232171280 -18516574 + MLT1A1 LTR MaLR 1 364 -1 357 278 188 0 chr2 232173140 232173273 -18514581 + MIR SINE MIR 77 234 -28 353 316 53 0 chr2 232173292 232173406 -18514448 - L2 LINE L2 -237 3035 2916 244 286 29 0 chr2 232173540 232173610 -18514244 - MER5A DNA MER1_type -74 115 44 201 278 167 0 chr2 232173836 232173926 -18513928 - MIR3 SINE MIR -7 201 97 508 292 168 86 chr2 232174813 232175059 -18512795 + L2 LINE L2 2415 2639 -674 1920 113 7 28 chr2 232175059 232175343 -18512511 - AluSx SINE Alu 0 312 35 508 292 168 86 chr2 232175343 232175718 -18512136 + L2 LINE L2 2639 3097 -216 2061 115 0 7 chr2 232175718 232176004 -18511850 - AluJo SINE Alu -24 288 5 508 292 168 86 chr2 232176004 232176195 -18511659 + L2 LINE L2 3097 3271 -42 758 48 0 19 chr2 232176200 232176304 -18511550 + (TAGA)n Simple_repeat Simple_repeat 4 105 0 191 188 21 0 chr2 232176308 232176356 -18511498 + (TGGA)n Simple_repeat Simple_repeat 1 49 0 226 282 87 24 chr2 232176619 232176749 -18511105 + MIR3 SINE MIR 69 207 -1 238 353 135 6 chr2 232177586 232177742 -18510112 - MER5B DNA MER1_type -2 176 1 1751 124 0 4 chr2 232178704 232178953 -18508901 - AluSx SINE Alu -27 285 38 22 0 0 0 chr2 232180356 232180378 -18507476 + AT_rich Low_complexity Low_complexity 1 22 0 535 281 73 50 chr2 232182207 232182524 -18505330 + L1ME LINE L1 5325 5648 -473 1075 313 48 33 chr2 232182524 232183006 -18504848 + MLT1J LTR MaLR 3 491 -20 259 209 108 93 chr2 232183091 232183220 -18504634 + L1ME LINE L1 5745 5875 -246 764 146 57 16 chr2 232183825 232183948 -18503906 - FLAM_C SINE Alu -5 128 1 2241 97 7 26 chr2 232184404 232184712 -18503142 - AluSc SINE Alu -7 302 1 231 336 70 37 chr2 232184734 232185005 -18502849 - L1MEd LINE L1 -5279 840 561 2036 304 42 45 chr2 232185529 232186413 -18501441 + MER90-int LTR ERV1 2145 3025 -1622 386 332 62 56 chr2 232187240 232187707 -18500147 + MER90-int LTR ERV1 6168 6637 -164 732 220 29 83 chr2 232187875 232187892 -18499962 + MER90 LTR ERV1 2 18 -557 330 45 0 0 chr2 232187892 232187936 -18499918 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 732 220 29 83 chr2 232187936 232188195 -18499659 + MER90 LTR ERV1 18 263 -312 809 217 53 16 chr2 232188235 232188424 -18499430 + MER90 LTR ERV1 419 614 0 2355 111 39 39 chr2 232189784 232190146 -18497708 + THE1B LTR MaLR 1 362 -2 2236 102 0 40 chr2 232190873 232191197 -18496657 - AluY SINE Alu 0 311 1 2959 78 95 5 chr2 232191328 232191739 -18496115 + LTR7 LTR ERV1 1 448 -2 20943 89 9 23 chr2 232191741 232194777 -18493077 + HERVH LTR ERV1 1 2992 -4721 871 155 20 0 chr2 232194763 232194911 -18492943 + HERVH LTR ERV1 3140 3290 -4423 * 3439 107 4 6 chr2 232194901 232195404 -18492450 + HERVH LTR ERV1 3492 3993 -3720 4315 133 23 1 chr2 232195406 232196054 -18491800 + HERVH LTR ERV1 4488 5149 -2564 1356 143 19 0 chr2 232196055 232196271 -18491583 + HERVH LTR ERV1 5600 5819 -1894 2521 85 48 13 chr2 232196271 232196648 -18491206 + HERVH LTR ERV1 7324 7713 0 3024 68 95 5 chr2 232196648 232197059 -18490795 + LTR7 LTR ERV1 1 448 -2 1973 94 8 4 chr2 232197226 232197482 -18490372 + AluSx SINE Alu 33 289 -23 2265 183 101 7 chr2 232197618 232198045 -18489809 - MER70A LTR ERVL -2 470 4 520 246 63 72 chr2 232198129 232198159 -18489695 - L1MC5 LINE L1 -36 7925 7896 4333 108 2 0 chr2 232198159 232198712 -18489142 - MER41A LTR ERV1 0 554 1 520 246 63 72 chr2 232198712 232198764 -18489090 - L1MC5 LINE L1 -65 7896 7845 2032 188 29 63 chr2 232198764 232199286 -18488568 + MLT1D LTR MaLR 1 504 -1 520 246 63 72 chr2 232199286 232199317 -18488537 - L1MC5 LINE L1 -116 7845 7815 210 37 0 0 chr2 232199317 232199344 -18488510 + (CA)n Simple_repeat Simple_repeat 1 27 0 520 246 63 72 chr2 232199344 232199642 -18488212 - L1MC5 LINE L1 -146 7815 7516 744 198 57 52 chr2 232199663 232199855 -18487999 - MER3 DNA MER1_type 0 209 17 225 240 0 0 chr2 232199862 232199937 -18487917 + CT-rich Low_complexity Low_complexity 1 75 0 516 242 15 51 chr2 232199946 232200086 -18487768 - L1MC5 LINE L1 -414 7394 7354 2237 116 3 0 chr2 232200086 232200396 -18487458 - AluY SINE Alu 0 311 1 516 242 15 51 chr2 232200396 232200488 -18487366 - L1MC5 LINE L1 -454 7354 7260 2170 103 3 0 chr2 232200532 232200814 -18487040 + AluSx SINE Alu 3 285 -27 285 118 0 0 chr2 232200814 232200865 -18486989 + (TA)n Simple_repeat Simple_repeat 1 51 0 1295 188 53 43 chr2 232201388 232201670 -18486184 + AluJb SINE Alu 1 285 -27 642 212 28 14 chr2 232201861 232202044 -18485810 + L1ME1 LINE L1 5995 6184 0 504 145 0 13 chr2 232202176 232202252 -18485602 + Tigger5 DNA MER2_type 8 82 -2241 * 884 131 17 63 chr2 232202242 232202417 -18485437 + Tigger5 DNA MER2_type 2081 2247 -76 2349 144 15 3 chr2 232202570 232202903 -18484951 + MER1B DNA MER1_type 1 337 0 1397 164 96 10 chr2 232204178 232204471 -18483383 + MER33 DNA MER1_type 1 318 -6 2127 116 3 0 chr2 232204970 232205262 -18482592 + AluSx SINE Alu 13 305 -7 2197 99 0 33 chr2 232206310 232206613 -18481241 + AluSq SINE Alu 1 293 -20 867 268 14 0 chr2 232207353 232207562 -18480292 + MIR SINE MIR 47 258 -4 233 283 71 30 chr2 232209433 232209532 -18478322 + L2 LINE L2 1372 1474 -1840 1133 205 48 29 chr2 232209554 232209931 -18477923 + MLT1F1 LTR MaLR 141 561 -6 1012 209 206 57 chr2 232209939 232210380 -18477474 - L1MEc LINE L1 -4119 2277 1771 2067 218 103 39 chr2 232210383 232211170 -18476684 + L1ME1 LINE L1 4950 5821 -345 2257 110 0 10 chr2 232211170 232211478 -18476376 + AluSq SINE Alu 1 305 -8 2067 218 103 39 chr2 232211478 232211775 -18476079 + L1ME1 LINE L1 5821 6098 -68 259 233 108 101 chr2 232211677 232211806 -18476048 + L1MA10 LINE L1 6169 6298 -36 * 1168 188 27 27 chr2 232211944 232212168 -18475686 + AluJo SINE Alu 65 288 -24 283 203 38 25 chr2 232212193 232212272 -18475582 - MER116 DNA Mariner 0 80 1 249 249 21 95 chr2 232212272 232212461 -18475393 - L2 LINE L2 -151 3162 2988 550 68 0 27 chr2 232212461 232212527 -18475327 - L1PA5 LINE L1 -251 5904 5839 2036 57 4 0 chr2 232212527 232212760 -18475094 + L1PA5 LINE L1 5910 6154 0 227 328 66 33 chr2 232212768 232212890 -18474964 - L2 LINE L2 -317 2996 2871 384 155 0 0 chr2 232213971 232214042 -18473812 + G-rich Low_complexity Low_complexity 3 73 0 679 194 0 30 chr2 232214066 232214200 -18473654 + MER45 DNA AcHobo 1 130 -823 442 326 106 0 chr2 232214358 232214576 -18473278 + MER45C DNA AcHobo 713 953 0 2156 135 0 0 chr2 232214797 232215101 -18472753 + AluSq SINE Alu 10 313 0 276 259 121 43 chr2 232215177 232215293 -18472561 - L2 LINE L2 -237 3035 2911 181 319 111 0 chr2 232215602 232215674 -18472180 - L2 LINE L2 -6 3266 3187 2127 125 3 0 chr2 232216258 232216547 -18471307 + AluSx SINE Alu 1 290 -22 230 95 24 0 chr2 232216558 232216600 -18471254 + (GA)n Simple_repeat Simple_repeat 2 44 0 * 252 86 0 0 chr2 232216597 232216632 -18471222 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 350 176 137 84 chr2 232216893 232217024 -18470830 + MLT1E2 LTR MaLR 1 138 -488 390 325 60 47 chr2 232217025 232217340 -18470514 - L2 LINE L2 -213 3059 2743 333 0 0 0 chr2 232217848 232217885 -18469969 + (CA)n Simple_repeat Simple_repeat 2 38 0 402 250 22 0 chr2 232218420 232218512 -18469342 - MER5B DNA MER1_type -6 172 79 190 200 50 0 chr2 232218821 232218861 -18468993 - MIR SINE MIR -81 127 86 483 184 8 53 chr2 232219806 232220060 -18467794 + AluJo SINE Alu 5 305 -7 200 143 0 0 chr2 232223358 232223386 -18464468 + L2 LINE L2 3204 3231 -41 220 263 32 53 chr2 232223549 232223644 -18464210 - L2 LINE L2 -226 3087 2995 602 263 189 7 chr2 232223675 232223972 -18463882 - L2 LINE L2 -426 2888 2538 328 341 39 23 chr2 232224442 232224571 -18463283 - L2 LINE L2 -16 3256 3126 1555 151 55 38 chr2 232224722 232225014 -18462840 + AluJo SINE Alu 1 297 -15 268 308 0 22 chr2 232225198 232225289 -18462565 + MER5B DNA MER1_type 86 174 -4 641 246 41 12 chr2 232225786 232225957 -18461897 + L1ME1 LINE L1 5983 6158 -8 2415 77 3 10 chr2 232226713 232227026 -18460828 + AluY SINE Alu 1 311 0 291 28 0 0 chr2 232227662 232227698 -18460156 + (CA)n Simple_repeat Simple_repeat 2 37 0 1761 130 0 106 chr2 232227703 232228042 -18459812 + AluJb SINE Alu 1 303 -9 1918 143 11 0 chr2 232228113 232228392 -18459462 + AluSx SINE Alu 20 301 -11 340 280 54 48 chr2 232228641 232228809 -18459045 + MIR SINE MIR 81 249 -13 232 284 185 17 chr2 232228959 232229111 -18458743 + MIR SINE MIR 16 186 -61 840 135 0 57 chr2 232229957 232230098 -18457756 - FLAM_C SINE Alu -9 134 2 2267 114 0 6 chr2 232230359 232230674 -18457180 - AluSq SINE Alu 0 313 1 23 33 0 0 chr2 232231147 232231177 -18456677 + AT_rich Low_complexity Low_complexity 1 30 0 2309 174 62 2 chr2 232231506 232231908 -18455946 + MSTB LTR MaLR 1 426 0 317 266 0 0 chr2 232231926 232231990 -18455864 + FLAM_A SINE Alu 1 64 -69 280 194 11 86 chr2 232232360 232232453 -18455401 + L1ME4a LINE L1 5959 6044 -77 2102 130 7 0 chr2 232232491 232232784 -18455070 + AluSx SINE Alu 1 295 -17 2253 92 3 7 chr2 232233473 232233788 -18454066 - AluSq SINE Alu 0 313 1 215 310 115 0 chr2 232233831 232233918 -18453936 + MIR3 SINE MIR 108 204 -4 2121 114 4 0 chr2 232234461 232234766 -18453088 + AluSp SINE Alu 4 309 0 1778 177 9 25 chr2 232236477 232236794 -18451060 + AluJo SINE Alu 1 312 0 399 209 45 9 chr2 232238390 232238500 -18449354 + L1P LINE L1 5309 5422 -729 680 291 73 33 chr2 232238644 232239043 -18448811 + L1ME4a LINE L1 5657 6071 -50 2572 149 28 33 chr2 232239049 232239479 -18448375 - MSTA LTR MaLR 0 428 1 10077 164 31 4 chr2 232239479 232241086 -18446768 - MSTA-int LTR MaLR 0 1651 1 839 157 61 65 chr2 232241086 232241289 -18446565 - MSTB LTR MaLR 0 426 202 798 196 0 0 chr2 232243002 232243135 -18444719 + FLAM_A SINE Alu 1 133 0 320 257 53 46 chr2 232243438 232243590 -18444264 + L1ME2 LINE L1 3083 3235 -2911 1497 98 0 0 chr2 232243603 232243796 -18444058 + AluY SINE Alu 1 193 -118 230 54 0 0 chr2 232243796 232243833 -18444021 + AluY SINE Alu 262 298 -2 1113 162 31 59 chr2 232243872 232244094 -18443760 + MER20 DNA MER1_type 4 219 0 358 307 108 24 chr2 232244433 232244804 -18443050 + L1ME2 LINE L1 3555 3956 -2190 28 53 0 40 chr2 232245987 232246062 -18441792 + AT_rich Low_complexity Low_complexity 1 72 0 678 277 109 13 chr2 232246161 232246399 -18441455 + MLT1K LTR MaLR 324 584 -4 565 318 72 46 chr2 232246559 232247135 -18440719 + L1ME2 LINE L1 5275 5884 -280 2327 87 0 0 chr2 232247140 232247428 -18440426 + AluSx SINE Alu 15 302 -10 801 161 14 42 chr2 232248035 232248178 -18439676 + AluJo SINE Alu 1 139 -173 326 167 18 3 chr2 232248178 232248243 -18439611 - AluJb SINE Alu -85 217 164 984 127 0 0 chr2 232248260 232248402 -18439452 + AluJb SINE Alu 168 309 -3 1925 108 3 89 chr2 232248761 232249086 -18438768 + AluSx SINE Alu 1 297 -15 374 124 10 52 chr2 232249990 232250087 -18437767 + (TCC)n Simple_repeat Simple_repeat 2 94 0 21 36 0 0 chr2 232250918 232250946 -18436908 + AT_rich Low_complexity Low_complexity 1 28 0 2015 83 66 0 chr2 232251527 232251815 -18436039 + AluY SINE Alu 1 307 -4 2095 139 0 7 chr2 232252931 232253232 -18434622 + AluSg SINE Alu 1 299 -11 25 0 0 0 chr2 232253232 232253257 -18434597 + AT_rich Low_complexity Low_complexity 1 25 0 2375 78 0 3 chr2 232253537 232253830 -18434024 + AluSx SINE Alu 1 292 -20 2419 176 51 34 chr2 232254075 232254602 -18433252 + MER74A LTR ERVL 1 536 -22 23 0 0 0 chr2 232254825 232254848 -18433006 + AT_rich Low_complexity Low_complexity 1 23 0 2173 131 0 3 chr2 232255032 232255345 -18432509 + AluSq SINE Alu 1 312 -1 338 339 60 22 chr2 232256078 232256261 -18431593 - MER91B DNA MER1_type 0 190 1 1464 172 100 0 chr2 232256628 232256889 -18430965 + AluJo SINE Alu 1 287 -25 664 180 17 22 chr2 232256920 232257098 -18430756 + GA-rich Low_complexity Low_complexity 3 179 0 1897 176 135 31 chr2 232257306 232257720 -18430134 - MSTB2 LTR MaLR 0 457 1 1291 204 8 4 chr2 232258053 232258293 -18429561 - MLT1D LTR MaLR 0 505 265 711 142 123 7 chr2 232258326 232258481 -18429373 - MLT1D LTR MaLR -308 197 25 504 188 182 29 chr2 232258518 232258688 -18429166 + MIR SINE MIR 20 215 -47 2501 47 0 0 chr2 232259315 232259614 -18428240 + AluY SINE Alu 1 299 -12 255 284 15 0 chr2 232261465 232261532 -18426322 - L2 LINE L2 -43 3270 3203 1436 188 118 61 chr2 232261654 232262096 -18425758 + MLT1C LTR MaLR 1 467 0 2371 131 29 27 chr2 232262198 232262572 -18425282 + THE1C LTR MaLR 1 375 0 331 349 28 24 chr2 232262735 232262947 -18424907 + MLT1K LTR MaLR 126 338 -250 242 232 53 93 chr2 232263388 232263539 -18424315 - LTR67 LTR ERVL 0 557 413 1380 192 58 60 chr2 232264595 232264939 -18422915 + MLT1A1 LTR MaLR 1 345 -20 2614 131 17 0 chr2 232264939 232265297 -18422557 + THE1B LTR MaLR 1 364 0 1380 192 58 60 chr2 232265297 232265317 -18422537 + MLT1A1 LTR MaLR 345 364 -1 184 261 15 31 chr2 232265380 232265445 -18422409 - L2 LINE L2 -3 3310 3247 574 316 96 0 chr2 232265718 232265927 -18421927 + MIR SINE MIR 12 240 -22 5938 94 13 1 chr2 232265996 232266817 -18421037 + L1PA13 LINE L1 5333 6163 0 25 31 0 0 chr2 232267245 232267277 -18420577 + AT_rich Low_complexity Low_complexity 1 32 0 205 203 0 29 chr2 232267719 232267788 -18420066 + GA-rich Low_complexity Low_complexity 5 71 0 15315 106 17 70 chr2 232268374 232268856 -18418998 + Tigger1 DNA MER2_type 1 507 -1911 1889 87 65 33 chr2 232268856 232269171 -18418683 + AluSx SINE Alu 1 324 0 15315 106 17 70 chr2 232269171 232271224 -18416630 + Tigger1 DNA MER2_type 507 2401 -17 21 71 0 0 chr2 232271616 232271658 -18416196 + AT_rich Low_complexity Low_complexity 1 42 0 215 342 58 25 chr2 232271719 232271839 -18416015 - MIR SINE MIR -55 153 30 2255 147 37 34 chr2 232271890 232272442 -18415412 + MLT2A2 LTR ERVL 1 554 0 189 74 0 0 chr2 232274280 232274307 -18413547 + (TTC)n Simple_repeat Simple_repeat 1 27 0 201 156 22 22 chr2 232274992 232275037 -18412817 + L2 LINE L2 3224 3268 -4 2678 149 50 6 chr2 232275821 232275884 -18411970 + L1MC1 LINE L1 5828 5887 -446 1570 178 8 0 chr2 232275884 232276143 -18411711 + AluJo SINE Alu 14 274 -38 2678 149 50 6 chr2 232276143 232276562 -18411292 + L1MC1 LINE L1 5887 6331 -2 180 77 0 0 chr2 232276660 232276686 -18411168 + (CA)n Simple_repeat Simple_repeat 1 26 0 1059 164 92 0 chr2 232276816 232277011 -18410843 - MER58B DNA MER1_type -1 340 128 2205 110 7 0 chr2 232277101 232277393 -18410461 - AluSp SINE Alu -9 304 11 498 284 24 0 chr2 232277793 232277962 -18409892 - MER5B DNA MER1_type -5 173 1 257 180 0 16 chr2 232278136 232278197 -18409657 + CT-rich Low_complexity Low_complexity 3 62 0 213 121 0 0 chr2 232279595 232279628 -18408226 + (TC)n Simple_repeat Simple_repeat 2 34 0 698 315 86 40 chr2 232279889 232280689 -18407165 + L2 LINE L2 1855 2691 -623 550 226 23 8 chr2 232281094 232281227 -18406627 + MIR SINE MIR 57 191 -71 326 380 42 6 chr2 232281322 232281488 -18406366 + L2 LINE L2 3101 3272 0 2209 139 34 5 chr2 232283058 232283440 -18404414 + L1MB4 LINE L1 5782 6174 -6 2248 110 3 0 chr2 232283626 232283927 -18403927 - AluSx SINE Alu -10 302 1 188 271 96 39 chr2 232284218 232284447 -18403407 - L2 LINE L2 -814 2500 2259 1205 163 9 41 chr2 232284547 232284768 -18403086 + MER20 DNA MER1_type 1 214 -5 405 0 0 0 chr2 232284810 232284855 -18402999 + (CA)n Simple_repeat Simple_repeat 2 46 0 2550 48 0 10 chr2 232285389 232285698 -18402156 - AluY SINE Alu -5 306 1 2239 121 0 3 chr2 232285756 232286063 -18401791 + AluSg SINE Alu 1 306 -4 469 277 15 7 chr2 232286378 232286515 -18401339 + MIR SINE MIR 17 154 -108 231 273 129 72 chr2 232286592 232286856 -18400998 + MARNA DNA Mariner 83 361 -225 1503 205 7 13 chr2 232286861 232287159 -18400695 + AluJo SINE Alu 6 301 -11 2075 143 0 0 chr2 232287168 232287462 -18400392 + AluJb SINE Alu 1 294 -18 1046 189 36 0 chr2 232287567 232287763 -18400091 - MER3 DNA MER1_type -4 205 3 408 294 125 18 chr2 232288768 232289095 -18398759 + L2 LINE L2 2014 2375 -939 305 228 54 11 chr2 232290759 232290851 -18397003 - L2 LINE L2 -30 3283 3188 279 261 99 43 chr2 232291521 232291682 -18396172 + MLT1K LTR MaLR 317 486 -102 261 139 0 0 chr2 232291720 232291763 -18396091 + (TTCTC)n Simple_repeat Simple_repeat 3 45 0 2434 111 11 27 chr2 232291772 232292140 -18395714 + THE1B LTR MaLR 1 362 -2 3365 62 7 0 chr2 232292142 232292560 -18395294 + THE1B-int LTR MaLR 1 421 -1159 1323 127 26 26 chr2 232292585 232292814 -18395040 + THE1B LTR MaLR 135 363 -1 1933 138 0 0 chr2 232292814 232293089 -18394765 - AluSx SINE Alu -33 279 5 2021 140 3 3 chr2 232293390 232293682 -18394172 + AluSx SINE Alu 1 292 -20 339 227 72 0 chr2 232294361 232294458 -18393396 + MIR SINE MIR 88 191 -71 213 265 0 44 chr2 232294612 232294680 -18393174 - MIR SINE MIR -61 147 83 729 146 0 36 chr2 232294830 232294967 -18392887 + L1PA8 LINE L1 6041 6172 0 1098 178 9 22 chr2 232295002 232295233 -18392621 + AluJo SINE Alu 82 309 -3 512 248 112 12 chr2 232295497 232295658 -18392196 - MER5B DNA MER1_type 0 178 2 39 38 0 0 chr2 232297251 232297304 -18390550 + AT_rich Low_complexity Low_complexity 1 53 0 673 193 33 80 chr2 232297307 232297365 -18390489 - MIR SINE MIR -14 248 189 2195 104 7 7 chr2 232297365 232297662 -18390192 - AluSx SINE Alu -15 297 1 673 193 33 80 chr2 232297662 232297815 -18390039 - MIR SINE MIR -73 189 47 1842 117 39 0 chr2 232298043 232298339 -18389515 + AluSx SINE Alu 17 322 0 832 213 0 6 chr2 232298431 232298595 -18389259 + FRAM SINE Alu 1 158 -18 217 240 170 20 chr2 232300171 232300271 -18387583 - L2 LINE L2 -414 2900 2786 248 293 0 0 chr2 232301167 232301242 -18386612 - MIR SINE MIR -131 131 57 2510 123 6 8 chr2 232301414 232301779 -18386075 - THE1B LTR MaLR 0 364 1 396 0 0 0 chr2 232301854 232301898 -18385956 + (CA)n Simple_repeat Simple_repeat 2 45 0 254 160 0 0 chr2 232302613 232302663 -18385191 + L1MC/D LINE L1 5767 5816 -1992 2324 100 0 0 chr2 232302679 232302979 -18384875 + AluSx SINE Alu 1 300 -12 1661 183 9 46 chr2 232302990 232303313 -18384541 + AluJb SINE Alu 1 311 -1 1174 215 106 83 chr2 232303333 232303638 -18384216 - MER34C LTR ERV1 0 585 260 1381 97 0 0 chr2 232303638 232303833 -18384021 + L1MA4 LINE L1 6095 6289 -11 1174 215 106 83 chr2 232303833 232304094 -18383760 - MER34C LTR ERV1 -325 260 6 1831 141 0 50 chr2 232304321 232304640 -18383214 + AluJb SINE Alu 6 308 -4 331 302 32 7 chr2 232304642 232304857 -18382997 + L1ME3A LINE L1 5744 5968 -196 399 333 92 54 chr2 232305405 232305741 -18382113 - L2 LINE L2 -16 3256 2908 705 208 7 7 chr2 232305934 232306083 -18381771 - MIR SINE MIR 0 262 114 24 53 0 0 chr2 232306176 232306214 -18381640 + AT_rich Low_complexity Low_complexity 1 38 0 222 303 169 0 chr2 232306251 232306340 -18381514 + L2 LINE L2 3155 3258 -14 2000 142 0 0 chr2 232307867 232308149 -18379705 - AluSx SINE Alu -30 282 1 2072 139 7 0 chr2 232308345 232308647 -18379207 + AluSx SINE Alu 1 304 -8 225 0 0 0 chr2 232308672 232308697 -18379157 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 1417 188 3 76 chr2 232308927 232309230 -18378624 - AluJo SINE Alu -31 281 1 2176 132 0 0 chr2 232309712 232310015 -18377839 - AluSx SINE Alu -9 303 1 579 261 36 35 chr2 232310186 232310515 -18377339 + L1MC5 LINE L1 7491 7866 -176 2292 115 0 0 chr2 232310833 232311138 -18376716 + AluSg SINE Alu 4 308 -2 207 69 0 0 chr2 232312457 232312486 -18375368 + (CA)n Simple_repeat Simple_repeat 2 30 0 1778 152 14 14 chr2 232312495 232312815 -18375039 - AluJb SINE Alu 0 320 1 2437 89 3 0 chr2 232313077 232313379 -18374475 + AluSp SINE Alu 2 304 -9 2081 113 4 0 chr2 232313926 232314201 -18373653 - AluSx SINE Alu -36 276 1 2324 87 7 3 chr2 232314290 232314589 -18373265 + AluY SINE Alu 1 300 -11 35 24 0 0 chr2 232314759 232314801 -18373053 + AT_rich Low_complexity Low_complexity 1 42 0 772 170 7 22 chr2 232314807 232314942 -18372912 + FLAM_A SINE Alu 1 133 0 180 0 0 0 chr2 232315185 232315205 -18372649 + (CA)n Simple_repeat Simple_repeat 2 21 0 389 361 68 40 chr2 232315351 232315815 -18372039 - L2 LINE L2 -10 3262 2773 351 186 35 0 chr2 232315848 232315934 -18371920 - L1MD3 LINE L1 -2 7993 7905 280 188 38 38 chr2 232315934 232316014 -18371840 + LTR66 LTR ERVL 359 438 -172 297 167 0 0 chr2 232316016 232316070 -18371784 + (TA)n Simple_repeat Simple_repeat 1 54 0 489 212 0 99 chr2 232316070 232316221 -18371633 - L1MD2 LINE L1 -124 6235 6100 418 316 201 35 chr2 232316234 232316747 -18371107 - L2 LINE L2 -583 2731 2134 185 313 54 45 chr2 232316811 232316923 -18370931 + L2 LINE L2 3182 3294 -19 1443 171 16 96 chr2 232317110 232317251 -18370603 + AluJo SINE Alu 1 103 -209 2127 131 0 0 chr2 232317251 232317533 -18370321 + AluSx SINE Alu 1 282 -30 1443 171 16 96 chr2 232317533 232317713 -18370141 + AluJo SINE Alu 103 296 -16 6499 138 21 25 chr2 232317798 232319632 -18368222 + L1MA5 LINE L1 4483 6300 0 2062 136 0 10 chr2 232319667 232319961 -18367893 + AluSx SINE Alu 1 291 -21 2098 114 58 47 chr2 232320302 232320662 -18367192 + THE1B LTR MaLR 1 364 0 318 242 225 0 chr2 232320992 232321112 -18366742 - L2 LINE L2 0 3313 3167 1490 214 16 47 chr2 232321248 232321360 -18366494 + MLT1A2 LTR MaLR 3 117 -257 2041 147 131 11 chr2 232321360 232321742 -18366112 + MSTA LTR MaLR 1 428 0 1490 214 16 47 chr2 232321742 232322013 -18365841 + MLT1A2 LTR MaLR 117 374 0 207 69 0 0 chr2 232323001 232323030 -18364824 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 2345 44 41 10 chr2 232323042 232323335 -18364519 - AluY SINE Alu -9 302 1 463 116 11 11 chr2 232323380 232323475 -18364379 + (CA)n Simple_repeat Simple_repeat 1 95 0 465 208 243 6 chr2 232323891 232324064 -18363790 + LTR33 LTR ERVL 1 214 -307 487 286 44 5 chr2 232324119 232324322 -18363532 + LTR33 LTR ERVL 304 514 -7 190 201 40 75 chr2 232324337 232324418 -18363436 + MIR SINE MIR 25 103 -105 295 178 0 0 chr2 232324456 232324500 -18363354 - AluJo SINE Alu -28 274 231 3213 168 165 31 chr2 232324500 232325343 -18362511 + LTR28 LTR ERV1 1 1020 0 895 180 67 0 chr2 232325343 232325521 -18362333 - AluJo SINE Alu -79 233 44 254 292 74 9 chr2 232325538 232325668 -18362186 + MIR SINE MIR 123 259 -3 552 242 72 60 chr2 232325859 232326144 -18361710 + MER39 LTR ERV1 50 523 -182 1375 135 14 125 chr2 232326153 232326450 -18361404 + AluJb SINE Alu 34 297 -15 461 151 193 16 chr2 232326458 232326599 -18361255 + MER34 LTR ERV1 372 707 0 452 307 111 27 chr2 232326837 232327169 -18360685 + L2 LINE L2 2187 2546 -768 312 302 0 10 chr2 232327330 232327426 -18360428 - MIR SINE MIR -31 231 137 2169 127 3 10 chr2 232327428 232327742 -18360112 - AluSx SINE Alu 0 312 1 2452 48 30 0 chr2 232327754 232328049 -18359805 - AluY SINE Alu -7 304 1 196 318 78 68 chr2 232328335 232328527 -18359327 + L2 LINE L2 2871 3064 -208 202 315 206 0 chr2 232328590 232328682 -18359172 + L2 LINE L2 3162 3272 0 2395 77 82 82 chr2 232329499 232329876 -18357978 + MER51B LTR ERV1 1 377 0 189 0 0 0 chr2 232329909 232329930 -18357924 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2171 102 0 0 chr2 232329933 232330207 -18357647 - AluSx SINE Alu -32 280 7 836 229 103 62 chr2 232331038 232331553 -18356301 + MLT1H1 LTR MaLR 12 547 -8 2690 141 33 26 chr2 232331780 232332205 -18355649 + MSTC LTR MaLR 1 428 0 2493 188 84 4 chr2 232332845 232333323 -18354531 + MLT2B1 LTR ERVL 5 520 0 228 163 0 0 chr2 232333333 232333376 -18354478 + CT-rich Low_complexity Low_complexity 1 43 0 1894 124 102 13 chr2 232334558 232334873 -18352981 - MER2 DNA MER2_type -1 343 1 212 235 20 0 chr2 232335119 232335170 -18352684 - MIR SINE MIR -118 144 93 225 154 0 0 chr2 232335491 232335530 -18352324 + T-rich Low_complexity Low_complexity 1 39 0 2047 100 12 40 chr2 232336355 232336676 -18351178 + AluSx SINE Alu 1 312 0 351 285 147 72 chr2 232336911 232337409 -18350445 + L1M2 LINE L1 857 1391 -5458 2573 38 0 0 chr2 232337926 232338218 -18349636 - AluY SINE Alu -19 292 1 217 270 68 14 chr2 232339041 232339115 -18348739 - L3 LINE CR1 -3 1574 1497 766 171 12 35 chr2 232339508 232339658 -18348196 + L1MD1 LINE L1 6027 6175 -67 1505 174 40 14 chr2 232339658 232339981 -18347873 - AluJo SINE Alu 0 331 2 766 171 12 35 chr2 232339981 232339999 -18347855 + L1MD1 LINE L1 6175 6192 -50 257 130 0 0 chr2 232340047 232340093 -18347761 + L1MD2 LINE L1 6313 6358 -1 2194 110 3 7 chr2 232340143 232340444 -18347410 - AluSx SINE Alu -12 300 1 284 328 16 8 chr2 232340639 232340761 -18347093 - L1 LINE L1 -2439 3707 3585 2171 69 46 26 chr2 232340771 232341074 -18346780 + AluSc SINE Alu 1 309 0 226 283 9 18 chr2 232341215 232341328 -18346526 - L1 LINE L1 -2660 3486 3375 1847 146 4 0 chr2 232341467 232341741 -18346113 - AluSx SINE Alu -11 301 27 231 314 13 39 chr2 232341760 232341913 -18345941 - L1 LINE L1 -3149 2997 2849 2465 79 0 16 chr2 232341990 232342308 -18345546 - AluSq SINE Alu 0 313 1 36 53 0 0 chr2 232342420 232342477 -18345377 + AT_rich Low_complexity Low_complexity 1 57 0 319 271 0 69 chr2 232342477 232342621 -18345233 - L1 LINE L1 -3784 2362 2229 2402 86 10 0 chr2 232342634 232342938 -18344916 + AluSx SINE Alu 1 307 -5 1769 183 89 9 chr2 232342945 232343283 -18344571 + MLT1A1 LTR MaLR 1 365 0 23 0 0 0 chr2 232345152 232345175 -18342679 + AT_rich Low_complexity Low_complexity 1 23 0 2425 100 0 0 chr2 232345356 232345665 -18342189 - AluSc SINE Alu 0 309 1 257 155 28 84 chr2 232345995 232346066 -18341788 - L1MC4 LINE L1 -1340 6702 6636 26 0 0 0 chr2 232346099 232346125 -18341729 + AT_rich Low_complexity Low_complexity 1 26 0 2169 111 0 0 chr2 232346136 232346424 -18341430 + AluSx SINE Alu 1 288 -24 252 59 0 0 chr2 232346426 232346460 -18341394 + (CTAA)n Simple_repeat Simple_repeat 2 35 0 417 284 26 37 chr2 232346581 232346771 -18341083 - MER5A DNA MER1_type 0 189 2 610 96 0 0 chr2 232347235 232347318 -18340536 - AluSx SINE Alu -13 299 217 1244 113 0 0 chr2 232347318 232347478 -18340376 - AluSx SINE Alu -152 160 1 214 282 13 26 chr2 232347823 232347901 -18339953 - MIR3 SINE MIR -19 189 113 1280 367 3 30 chr2 232348221 232348554 -18339300 - AluSg SINE Alu 0 310 1 201 253 67 40 chr2 232349378 232349453 -18338401 - L3 LINE CR1 -3 1574 1498 265 171 36 32 chr2 232349826 232350052 -18337802 + (CACCC)n Simple_repeat Simple_repeat 1 227 0 676 84 0 0 chr2 232350153 232350236 -18337618 - AluS SINE Alu -228 84 2 1362 235 129 43 chr2 232350283 232350933 -18336921 - HAL1 LINE L1 -927 1580 875 1459 275 144 35 chr2 232350954 232351692 -18336162 - HAL1 LINE L1 -1689 818 1 341 344 75 20 chr2 232351765 232351930 -18335924 - L1M4 LINE L1 -2944 3202 3012 2153 116 0 0 chr2 232351930 232352240 -18335614 + AluSx SINE Alu 1 310 0 341 344 75 20 chr2 232352240 232352367 -18335487 - L1M4 LINE L1 -3134 3012 2893 31 0 0 0 chr2 232352374 232352405 -18335449 + AT_rich Low_complexity Low_complexity 1 31 0 890 201 6 6 chr2 232352405 232352574 -18335280 - FRAM SINE Alu -7 169 1 2147 126 0 0 chr2 232354366 232354659 -18333195 - AluSx SINE Alu -19 293 1 216 226 0 19 chr2 232355207 232355260 -18332594 + MIR SINE MIR 201 252 -10 304 250 33 22 chr2 232356371 232356417 -18331437 + MLT1A1 LTR MaLR 273 317 -48 2100 116 0 0 chr2 232356417 232356694 -18331160 + AluSx SINE Alu 1 277 -35 304 250 33 22 chr2 232356694 232356739 -18331115 + MLT1A1 LTR MaLR 317 365 0 283 86 0 0 chr2 232357004 232357039 -18330815 + MSTA LTR MaLR 1 35 -393 237 157 39 20 chr2 232357841 232357892 -18329962 + MER5B DNA MER1_type 1 52 -126 275 210 99 111 chr2 232357995 232358083 -18329771 - MARNA DNA Mariner -164 422 335 2313 66 35 0 chr2 232358083 232358372 -18329482 - AluSp SINE Alu -12 301 3 275 210 99 111 chr2 232358372 232358464 -18329390 - MARNA DNA Mariner -251 335 244 283 352 28 9 chr2 232359114 232359222 -18328632 + MIR SINE MIR 23 132 -76 1172 203 3 92 chr2 232359322 232359628 -18328226 + AluJo SINE Alu 1 279 -33 249 33 0 0 chr2 232359628 232359658 -18328196 + (CA)n Simple_repeat Simple_repeat 2 31 0 208 203 0 125 chr2 232359843 232359907 -18327947 - L2 LINE L2 -7 3265 3210 4051 179 20 18 chr2 232360835 232361737 -18326117 + L1MC2 LINE L1 5307 6344 0 2078 174 81 23 chr2 232361953 232362384 -18325470 + MSTB2 LTR MaLR 1 456 -1 1903 191 71 61 chr2 232362909 232363134 -18324720 + MLT1D LTR MaLR 1 222 -283 2204 100 14 0 chr2 232363134 232363425 -18324429 + AluSg SINE Alu 1 295 -15 1903 191 71 61 chr2 232363425 232363691 -18324163 + MLT1D LTR MaLR 222 497 -8 1679 133 81 7 chr2 232363889 232364160 -18323694 - MSTA LTR MaLR 0 428 138 1755 136 139 39 chr2 232364454 232364785 -18323069 - THE1B LTR MaLR 0 364 1 369 343 69 19 chr2 232365275 232365593 -18322261 - HAL1 LINE L1 -874 1633 1300 1462 179 10 22 chr2 232365595 232365907 -18321947 - AluJo SINE Alu -4 308 1 1353 176 0 0 chr2 232365952 232366173 -18321681 - AluJo SINE Alu -10 302 82 22 0 0 0 chr2 232366437 232366459 -18321395 + AT_rich Low_complexity Low_complexity 1 22 0 2438 194 50 19 chr2 232367442 232367728 -18320126 + L1M4 LINE L1 4707 4983 -1181 1202 180 12 82 chr2 232367728 232367983 -18319871 + MER8 DNA MER2_type 1 237 -2 2438 194 50 19 chr2 232367983 232368392 -18319462 + L1M4 LINE L1 4983 5421 -743 383 303 254 11 chr2 232368554 232368739 -18319115 + MIR SINE MIR 23 252 -10 217 122 0 49 chr2 232370639 232370680 -18317174 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 348 217 63 67 chr2 232372380 232372560 -18315294 + MIR SINE MIR 7 259 -3 23 0 0 0 chr2 232372592 232372615 -18315239 + AT_rich Low_complexity Low_complexity 1 23 0 355 279 112 61 chr2 232372638 232372683 -18315171 - MIR SINE MIR -36 226 185 2335 78 10 0 chr2 232372683 232372978 -18314876 - AluY SINE Alu -13 298 1 355 279 112 61 chr2 232372978 232373129 -18314725 - MIR SINE MIR -77 185 20 545 201 37 82 chr2 232373588 232373672 -18314182 + MER58A DNA MER1_type 1 78 -263 2039 99 27 3 chr2 232373672 232373964 -18313890 - AluSx SINE Alu 0 312 14 545 201 37 82 chr2 232373964 232374013 -18313841 + MER58A DNA MER1_type 78 128 -96 208 316 186 42 chr2 232374354 232374756 -18313098 + L2 LINE L2 1621 1964 -1350 897 214 16 31 chr2 232374756 232374948 -18312906 - MER5A DNA MER1_type 0 189 1 208 316 186 42 chr2 232374948 232375455 -18312399 + L2 LINE L2 1964 2661 -653 306 261 50 62 chr2 232377015 232377176 -18310678 + L1MC4a LINE L1 7474 7632 -176 252 0 0 0 chr2 232377702 232377730 -18310124 + (TGG)n Simple_repeat Simple_repeat 2 29 0 240 257 0 27 chr2 232381299 232381373 -18306481 + (CATATA)n Simple_repeat Simple_repeat 3 74 0 419 323 113 26 chr2 232381534 232381629 -18306225 - L1MC/D LINE L1 -567 5603 5518 1431 197 80 0 chr2 232381629 232381893 -18305961 + AluJb SINE Alu 2 286 -26 419 323 113 26 chr2 232381893 232382212 -18305642 - L1MC/D LINE L1 -652 5518 5261 25127 117 27 79 chr2 232382561 232387446 -18300408 + L1P3 LINE L1 12 4641 -1505 2591 75 25 0 chr2 232387450 232387870 -18299984 + L1P3 LINE L1 5017 5443 -729 3281 49 26 20 chr2 232387870 232388323 -18299531 + LTR13 LTR ERVK 533 988 -19 669 125 58 8 chr2 232388323 232388443 -18299411 + L1PA8 LINE L1 6042 6167 -5 844 146 76 16 chr2 232388533 232388718 -18299136 + L1MA3 LINE L1 6110 6305 0 302 284 150 62 chr2 232388798 232389139 -18298715 - L1MC/D LINE L1 -1446 4700 4330 336 331 56 35 chr2 232389212 232389553 -18298301 - L1MC/D LINE L1 -1922 4224 3877 281 333 0 0 chr2 232389637 232389730 -18298124 - L1MC/D LINE L1 -2310 3836 3744 1743 244 75 16 chr2 232390435 232390939 -18296915 + MLT1F LTR MaLR 1 534 -8 22 0 0 0 chr2 232390993 232391015 -18296839 + AT_rich Low_complexity Low_complexity 1 22 0 182 128 26 0 chr2 232391657 232391696 -18296158 + A-rich Low_complexity Low_complexity 3 42 0 2165 237 77 1 chr2 232392233 232393030 -18294824 + L1ME1 LINE L1 4759 5606 -560 740 220 53 65 chr2 232393096 232393341 -18294513 + L1ME1 LINE L1 5894 6135 -31 189 107 0 0 chr2 232393740 232393768 -18294086 + (TATG)n Simple_repeat Simple_repeat 4 31 0 1750 176 4 0 chr2 232393769 232394047 -18293807 - AluJb SINE Alu -33 279 1 21 57 0 0 chr2 232395023 232395058 -18292796 + AT_rich Low_complexity Low_complexity 1 35 0 195 42 0 0 chr2 232395654 232395678 -18292176 + (TG)n Simple_repeat Simple_repeat 1 24 0 1834 128 4 4 chr2 232395962 232396235 -18291619 + AluSx SINE Alu 40 312 0 308 98 0 0 chr2 232396402 232396453 -18291401 + Alu SINE Alu 247 297 -3 1797 208 99 7 chr2 232397708 232398150 -18289704 - MLT1D LTR MaLR 0 505 23 209 420 17 0 chr2 232398179 232398298 -18289556 + L2 LINE L2 1335 1455 -1859 2162 68 58 41 chr2 232398956 232399251 -18288603 + AluY SINE Alu 1 300 -11 253 268 62 71 chr2 232399279 232399391 -18288463 - MER102a DNA MER1_type 0 330 220 2276 67 3 3 chr2 232399578 232399898 -18287956 + AluY SINE Alu 1 320 0 351 226 75 9 chr2 232400130 232400236 -18287618 + L1ME2 LINE L1 6050 6162 -2 1687 183 0 11 chr2 232400245 232400529 -18287325 + AluJb SINE Alu 1 281 -31 24 32 0 0 chr2 232400532 232400563 -18287291 + AT_rich Low_complexity Low_complexity 1 31 0 1075 74 0 7 chr2 232400759 232400894 -18286960 + AluSq/x SINE Alu 6 139 -174 23 68 0 0 chr2 232401066 232401110 -18286744 + AT_rich Low_complexity Low_complexity 1 44 0 21 57 0 0 chr2 232401977 232402012 -18285842 + AT_rich Low_complexity Low_complexity 1 35 0 195 42 0 0 chr2 232402608 232402632 -18285222 + (TG)n Simple_repeat Simple_repeat 1 24 0 2401 79 13 0 chr2 232405290 232405595 -18282259 - AluSp SINE Alu -3 310 2 188 217 87 0 chr2 232405993 232406039 -18281815 + L2 LINE L2 3262 3311 -2 225 278 21 62 chr2 232407175 232407272 -18280582 - MIR SINE MIR -88 174 82 257 300 77 39 chr2 232407906 232408036 -18279818 - MER5A DNA MER1_type -48 141 7 2183 95 23 0 chr2 232408974 232409279 -18278575 - AluSp SINE Alu -1 312 1 2307 98 3 0 chr2 232409810 232410106 -18277748 - AluSq SINE Alu -14 299 3 1501 175 35 35 chr2 232410118 232410403 -18277451 - AluJo SINE Alu -23 289 5 28 61 0 0 chr2 232410559 232410608 -18277246 + AT_rich Low_complexity Low_complexity 1 49 0 780 196 107 18 chr2 232412477 232412702 -18275152 - MER58B DNA MER1_type 0 341 97 2262 69 0 14 chr2 232413262 232413550 -18274304 + AluY SINE Alu 11 294 -17 1722 169 7 20 chr2 232413796 232414091 -18273763 - AluJb SINE Alu -19 293 3 1078 230 38 0 chr2 232414456 232414695 -18273159 + MER58 DNA MER1_type 2 249 -92 26 0 0 0 chr2 232416166 232416192 -18271662 + AT_rich Low_complexity Low_complexity 1 26 0 2460 66 3 3 chr2 232416672 232416973 -18270881 - AluY SINE Alu -10 301 1 2272 150 42 28 chr2 232417443 232417870 -18269984 + Tigger2a DNA MER2_type 1 433 -1 1790 133 27 20 chr2 232420273 232420567 -18267287 - AluSx SINE Alu -16 296 1 2115 115 10 0 chr2 232420884 232421189 -18266665 - AluSc SINE Alu -1 308 1 2148 96 7 3 chr2 232421218 232421510 -18266344 - AluSc SINE Alu -8 301 9 21 0 0 0 chr2 232421872 232421893 -18265961 + AT_rich Low_complexity Low_complexity 1 21 0 1918 135 28 0 chr2 232421964 232422252 -18265602 + AluSx SINE Alu 1 296 -16 28 86 0 0 chr2 232422484 232422554 -18265300 + AT_rich Low_complexity Low_complexity 1 70 0 1508 209 37 3 chr2 232422736 232423090 -18264764 - L1MB7 LINE L1 -210 5974 5609 303 267 172 17 chr2 232423173 232423289 -18264565 + MIR3 SINE MIR 36 169 -39 1867 134 53 15 chr2 232423629 232423971 -18263883 + MER46B DNA MER2_type 7 236 0 1810 88 52 4 chr2 232426003 232426254 -18261600 - AluSg SINE Alu -12 298 36 21 36 0 0 chr2 232426556 232426584 -18261270 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 232426632 232426657 -18261197 + AT_rich Low_complexity Low_complexity 1 25 0 1958 68 4 8 chr2 232427154 232427405 -18260449 + AluY SINE Alu 39 288 -23 296 111 0 0 chr2 232427363 232427408 -18260446 + Alu SINE Alu 248 292 -10 25 0 0 0 chr2 232427455 232427480 -18260374 + AT_rich Low_complexity Low_complexity 1 25 0 486 225 232 0 chr2 232427700 232427842 -18260012 + MIR SINE MIR 2 176 -86 3718 164 26 22 chr2 232427926 232428664 -18259190 + L1MB3 LINE L1 5443 6183 0 462 236 127 32 chr2 232429491 232429711 -18258143 + L1MEc LINE L1 2043 2283 -4113 194 302 38 0 chr2 232429805 232429858 -18257996 + MIR SINE MIR 5 59 -203 181 229 42 21 chr2 232429965 232430013 -18257841 + MIR SINE MIR 103 151 -111 279 115 96 0 chr2 232430194 232430246 -18257608 + MIR SINE MIR 173 229 -33 282 242 209 0 chr2 232430663 232430754 -18257100 - MIR3 SINE MIR -43 165 56 1525 141 12 8 chr2 232430874 232431130 -18256724 + AluSq SINE Alu 1 257 -56 382 108 0 0 chr2 232431255 232431320 -18256534 + AluSq SINE Alu 238 302 0 1959 151 3 7 chr2 232431482 232431781 -18256073 - AluSx SINE Alu -14 298 1 242 337 84 0 chr2 232431862 232431957 -18255897 - L2 LINE L2 -4 3309 3207 862 338 171 40 chr2 232432202 232433544 -18254310 - L2 LINE L2 -571 2743 1227 409 257 96 29 chr2 232433651 232433787 -18254067 - MIR SINE MIR 0 262 118 189 107 0 0 chr2 232433850 232433878 -18253976 + (A)n Simple_repeat Simple_repeat 1 28 0 2049 76 0 63 chr2 232435094 232435454 -18252400 + AluY SINE Alu 1 341 0 1850 120 66 0 chr2 232435589 232435863 -18251991 - AluSq SINE Alu -21 292 1 266 287 50 10 chr2 232436175 232436276 -18251578 + L2 LINE L2 2205 2309 -1005 377 302 54 8 chr2 232436277 232436406 -18251448 + L2 LINE L2 2738 2872 -442 776 268 113 0 chr2 232436407 232436620 -18251234 + MIR SINE MIR 11 247 -15 707 258 267 21 chr2 232436627 232436960 -18250894 + L2 LINE L2 2863 3277 -36 181 306 42 14 chr2 232437005 232437077 -18250777 + L2 LINE L2 2899 2972 -300 203 259 0 0 chr2 232439217 232439271 -18248583 + MER5B DNA MER1_type 1 54 -124 632 200 0 0 chr2 232439294 232439404 -18248450 + FLAM_A SINE Alu 16 125 -17 5054 163 75 8 chr2 232439417 232440443 -18247411 + L1MC1 LINE L1 5188 6278 -55 1976 120 0 4 chr2 232440453 232440728 -18247126 - AluSx SINE Alu -15 297 24 273 225 56 14 chr2 232440798 232440869 -18246985 + GA-rich Low_complexity Low_complexity 3 76 0 195 211 0 70 chr2 232440906 232440963 -18246891 - MER5B DNA MER1_type -125 53 1 1468 69 11 0 chr2 232441104 232441293 -18246561 - L1PA8A LINE L1 -27 6104 5914 2971 204 95 32 chr2 232441462 232442400 -18245454 + L1ME1 LINE L1 5098 6103 -63 22 70 0 0 chr2 232442422 232442465 -18245389 + AT_rich Low_complexity Low_complexity 1 43 0 948 159 18 24 chr2 232442722 232442892 -18244962 - AluJo SINE Alu -17 295 127 312 178 0 0 chr2 232442892 232442965 -18244889 + (TG)n Simple_repeat Simple_repeat 1 73 0 658 190 0 8 chr2 232442980 232443101 -18244753 - AluJo SINE Alu -192 120 1 1220 153 16 50 chr2 232443891 232444092 -18243762 - MER46A DNA MER2_type -2496 235 42 1740 173 0 23 chr2 232444092 232444399 -18243455 + AluJb SINE Alu 1 300 -12 1220 153 16 50 chr2 232444399 232444439 -18243415 - MER46A DNA MER2_type -2689 42 2 193 318 68 34 chr2 232444463 232444551 -18243303 + MIR3 SINE MIR 70 160 -48 247 299 52 0 chr2 232444811 232444888 -18242966 - L1MC/D LINE L1 -2027 5781 5701 23 33 0 0 chr2 232444907 232444937 -18242917 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 232445661 232445689 -18242165 + AT_rich Low_complexity Low_complexity 1 28 0 1479 179 24 17 chr2 232449114 232449426 -18238428 + AluJb SINE Alu 1 312 0 1838 147 10 19 chr2 232449426 232449737 -18238117 + AluSx SINE Alu 1 309 -3 264 341 87 36 chr2 232449870 232450008 -18237846 - MIR3 SINE MIR -55 153 9 246 62 0 0 chr2 232450255 232450287 -18237567 + (CA)n Simple_repeat Simple_repeat 1 32 0 921 321 216 18 chr2 232450376 232450512 -18237342 + L2 LINE L2 2055 2163 -1151 1853 134 84 6 chr2 232450512 232450847 -18237007 - MER46B DNA MER2_type 0 236 1 921 321 216 18 chr2 232450847 232451383 -18236471 + L2 LINE L2 2163 2860 -454 1449 154 93 29 chr2 232451461 232451598 -18236256 - AluJo SINE Alu -15 297 170 2392 74 0 0 chr2 232451598 232451895 -18235959 - AluY SINE Alu -12 299 3 1449 154 93 29 chr2 232451895 232452036 -18235818 - AluJo SINE Alu -142 170 1 771 230 17 6 chr2 232452036 232452203 -18235651 + MER58A DNA MER1_type 38 209 -15 394 380 84 21 chr2 232452207 232452491 -18235363 + L2 LINE L2 2936 3237 -35 1291 234 45 18 chr2 232453931 232454275 -18233579 + MLT1A1 LTR MaLR 1 455 -12 460 251 47 47 chr2 232454393 232454604 -18233250 + MLT1A2 LTR MaLR 147 357 -17 889 266 39 4 chr2 232455226 232455459 -18232395 + MIR SINE MIR 18 258 -4 3265 170 92 43 chr2 232456839 232457695 -18230159 + L1MC4 LINE L1 7141 7806 -2 189 0 0 0 chr2 232458610 232458631 -18229223 + (A)n Simple_repeat Simple_repeat 1 21 0 3552 242 117 94 chr2 232459123 232459741 -18228113 + L2 LINE L2 1058 1660 -1653 2036 76 32 76 chr2 232459741 232460056 -18227798 + AluY SINE Alu 1 301 -10 3552 242 117 94 chr2 232460056 232460156 -18227698 + L2 LINE L2 1660 1756 -1557 1780 154 3 27 chr2 232460156 232460454 -18227400 + AluJb SINE Alu 13 303 -9 3552 242 117 94 chr2 232460454 232460780 -18227074 + L2 LINE L2 1756 2073 -1240 1956 160 0 3 chr2 232460780 232461092 -18226762 + AluJb SINE Alu 1 311 -1 3552 242 117 94 chr2 232461092 232462219 -18225635 + L2 LINE L2 2073 3288 -25 2090 134 0 0 chr2 232463336 232463635 -18224219 + AluSx SINE Alu 1 299 -13 291 253 205 0 chr2 232463647 232463730 -18224124 - MIR SINE MIR -79 129 30 462 274 179 32 chr2 232463808 232463998 -18223856 + MIR SINE MIR 1 218 -44 2599 175 47 60 chr2 232464509 232464986 -18222868 + Tigger7 DNA MER2_type 1 471 -262 1854 165 14 0 chr2 232464986 232465277 -18222577 + AluSx SINE Alu 2 296 -16 2599 175 47 60 chr2 232465277 232465369 -18222485 + Tigger7 DNA MER2_type 471 563 -170 1373 146 133 20 chr2 232465361 232465663 -18222191 + Tigger7 DNA MER2_type 2152 2487 0 * 478 330 56 31 chr2 232465669 232465993 -18221861 + L2 LINE L2 2214 2545 -769 12624 141 53 14 chr2 232466019 232468189 -18219665 - Tigger2 DNA MER2_type 0 2718 464 1230 182 0 20 chr2 232468189 232468436 -18219418 - AluJo SINE Alu -3 309 68 2209 84 0 10 chr2 232468438 232468735 -18219119 + AluY SINE Alu 1 294 -17 201 294 357 0 chr2 232469308 232469434 -18218420 + L2 LINE L2 3098 3268 -4 198 0 0 0 chr2 232470939 232470961 -18216893 + (A)n Simple_repeat Simple_repeat 1 22 0 195 195 0 49 chr2 232471431 232471472 -18216382 + L2 LINE L2 3222 3260 -12 275 266 124 20 chr2 232472861 232473008 -18214846 - MIR3 SINE MIR -24 184 25 248 309 95 48 chr2 232473136 232473262 -18214592 + MIR3 SINE MIR 44 175 -33 1260 187 10 151 chr2 232473262 232473348 -18214506 + MLT1A1 LTR MaLR 1 97 -268 1289 199 63 11 chr2 232473348 232473635 -18214219 + AluJb SINE Alu 4 305 -7 1260 187 10 151 chr2 232473635 232473966 -18213888 + MLT1A1 LTR MaLR 97 359 -6 243 220 220 28 chr2 232474486 232474627 -18213227 + MER69A DNA AcHobo 10 177 0 314 328 81 38 chr2 232474665 232474900 -18212954 + MIR SINE MIR 9 253 -9 243 222 172 30 chr2 232475729 232475828 -18212026 - MIR SINE MIR -41 221 109 789 251 45 15 chr2 232476566 232476765 -18211089 - MIR SINE MIR 0 262 58 198 202 155 83 chr2 232476843 232476927 -18210927 + L2 LINE L2 3183 3272 0 220 377 0 0 chr2 232477655 232477724 -18210130 + polypurine Low_complexity Low_complexity 4 72 0 321 268 82 36 chr2 232477749 232477943 -18209911 - MARNA DNA Mariner -45 541 339 * 322 294 35 28 chr2 232477935 232478078 -18209776 - MARNA DNA Mariner -364 222 79 581 279 120 10 chr2 232478123 232478269 -18209585 - MIR SINE MIR -24 238 61 2344 70 0 7 chr2 232478269 232478567 -18209287 + AluY SINE Alu 1 296 -15 581 279 120 10 chr2 232478567 232478628 -18209226 - MIR SINE MIR -201 61 8 578 266 193 0 chr2 232478855 232479073 -18208781 + MIR SINE MIR 3 262 0 235 241 0 0 chr2 232479214 232479268 -18208586 + L1ME4a LINE L1 5730 5783 -2002 406 287 7 7 chr2 232479396 232479532 -18208322 + L1ME4a LINE L1 5982 6117 -4 1561 155 0 0 chr2 232481391 232481630 -18206224 + AluSx SINE Alu 8 246 -66 6139 118 8 5 chr2 232481732 232482796 -18205058 + L1PA5 LINE L1 5079 6146 -8 422 289 58 58 chr2 232483390 232483455 -18204399 - MIR SINE MIR -13 249 185 2053 114 0 0 chr2 232483455 232483769 -18204085 + AluY SINE Alu 2 315 0 422 289 58 58 chr2 232483769 232483944 -18203910 - MIR SINE MIR -76 186 8 28 29 0 0 chr2 232484238 232484273 -18203581 + AT_rich Low_complexity Low_complexity 1 35 0 528 223 98 66 chr2 232485004 232485260 -18202594 - MLT1F LTR MaLR -8 534 271 48 60 0 0 chr2 232485862 232485945 -18201909 + GC_rich Low_complexity Low_complexity 1 83 0 23 0 0 0 chr2 232486047 232486070 -18201784 + GC_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 232486253 232486281 -18201573 + GC_rich Low_complexity Low_complexity 1 28 0 769 219 72 60 chr2 232486603 232486868 -18200986 - L1ME1 LINE L1 -5 6161 5894 2261 237 77 1 chr2 232486934 232487731 -18200123 - L1ME1 LINE L1 -560 5606 4759 362 250 69 43 chr2 232488702 232488890 -18198964 + L1MB3 LINE L1 5989 6181 -2 498 232 127 32 chr2 232489719 232489939 -18197915 + L1MEc LINE L1 2043 2283 -4113 191 302 38 0 chr2 232490033 232490086 -18197768 + MIR SINE MIR 5 59 -203 273 115 96 0 chr2 232490422 232490474 -18197380 + MIR SINE MIR 173 229 -33 273 242 209 0 chr2 232490891 232490982 -18196872 - MIR3 SINE MIR -43 165 56 1365 179 3 47 chr2 232491146 232491443 -18196411 + AluJb SINE Alu 12 295 -17 795 217 29 0 chr2 232491837 232492012 -18195842 - L2 LINE L2 -779 2535 2356 1545 241 63 41 chr2 232492180 232492730 -18195124 - L2 LINE L2 -262 3010 2451 2122 103 0 35 chr2 232492730 232493041 -18194813 - AluSg SINE Alu -10 300 1 873 314 33 7 chr2 232493041 232493347 -18194507 - L2 LINE L2 -2999 315 2 247 152 109 0 chr2 232493519 232493565 -18194289 - MADE1 DNA Mariner -28 52 2 362 304 0 18 chr2 232493831 232493943 -18193911 + MIR SINE MIR 142 251 -11 210 344 0 0 chr2 232493955 232494016 -18193838 - MIR SINE MIR -108 154 94 229 244 67 44 chr2 232494020 232494110 -18193744 - MIR SINE MIR -145 117 26 2347 87 0 10 chr2 232494393 232494704 -18193150 + AluSc SINE Alu 1 308 -1 209 327 0 0 chr2 232494711 232494766 -18193088 - MIR SINE MIR -90 118 64 463 303 58 54 chr2 232495949 232496013 -18191841 - MIR SINE MIR -13 249 187 2289 82 0 0 chr2 232496013 232496328 -18191526 + AluY SINE Alu 1 315 0 463 303 58 54 chr2 232496328 232496503 -18191351 - MIR SINE MIR -75 187 8 2250 129 0 0 chr2 232496643 232496953 -18190901 - AluSx SINE Alu -2 310 1 2213 91 0 7 chr2 232497711 232497996 -18189858 + AluSc SINE Alu 1 283 -26 194 313 0 45 chr2 232498027 232498094 -18189760 + MIR SINE MIR 199 262 0 192 284 156 0 chr2 232498989 232499098 -18188756 + MIR SINE MIR 97 222 -40 1080 146 0 6 chr2 232499302 232499467 -18188387 - AluJo SINE Alu -22 290 127 594 196 28 0 chr2 232499469 232499576 -18188278 - MER7A DNA MER2_type -238 108 1 1876 93 127 0 chr2 232499821 232500089 -18187765 - AluSx SINE Alu 0 302 1 1116 166 0 0 chr2 232500110 232500279 -18187575 + FRAM SINE Alu 1 163 -13 2286 106 0 3 chr2 232500881 232501183 -18186671 - AluY SINE Alu -10 301 1 2283 116 0 0 chr2 232501183 232501486 -18186368 - AluSx SINE Alu -9 303 1 395 295 0 18 chr2 232501735 232501847 -18186007 + MIR SINE MIR 142 251 -11 215 339 0 0 chr2 232501855 232501920 -18185934 - MIR SINE MIR -104 158 94 255 162 59 59 chr2 232501924 232501992 -18185862 - MIR SINE MIR -145 117 50 1780 153 0 3 chr2 232502303 232502604 -18185250 + AluSc SINE Alu 3 302 -7 1484 165 56 13 chr2 232503541 232503859 -18183995 - MER33 DNA MER1_type -6 318 1 286 227 68 23 chr2 232503889 232503977 -18183877 + MLT1J LTR MaLR 110 201 -310 2255 86 10 0 chr2 232504001 232504291 -18183563 + AluY SINE Alu 1 293 -18 254 220 0 0 chr2 232504291 232504341 -18183513 + MLT1J2 LTR MaLR 277 326 -124 186 43 0 0 chr2 232504454 232504477 -18183377 + (TG)n Simple_repeat Simple_repeat 2 24 0 22 35 0 0 chr2 232504487 232504516 -18183338 + AT_rich Low_complexity Low_complexity 1 29 0 243 93 0 0 chr2 232504519 232504557 -18183297 + L1M3 LINE L1 5677 5714 -457 2408 86 0 0 chr2 232504707 232505010 -18182844 - AluSc SINE Alu -6 303 1 5071 156 16 44 chr2 232505073 232505938 -18181916 + L1MB3 LINE L1 5025 5851 -332 2273 108 0 0 chr2 232505938 232506235 -18181619 + AluSq SINE Alu 1 297 -16 5071 156 16 44 chr2 232506235 232506551 -18181303 + L1MB3 LINE L1 5851 6175 -8 24 32 0 0 chr2 232506553 232506584 -18181270 + AT_rich Low_complexity Low_complexity 1 31 0 1175 157 73 10 chr2 232506908 232507112 -18180742 - MER20 DNA MER1_type -2 217 1 204 135 0 27 chr2 232508714 232508751 -18179103 + (CAA)n Simple_repeat Simple_repeat 3 38 0 514 169 36 0 chr2 232509598 232509681 -18178173 + AluJb SINE Alu 206 291 -21 2157 124 0 3 chr2 232509684 232509974 -18177880 + AluSx SINE Alu 1 289 -23 939 226 23 51 chr2 232510005 232510262 -18177592 - MLT2D LTR ERVL -164 250 1 2476 78 0 3 chr2 232510349 232510656 -18177198 + AluY SINE Alu 1 306 -5 184 271 83 0 chr2 232510705 232510753 -18177101 - L2 LINE L2 -1 3312 3261 21 57 0 0 chr2 232511040 232511075 -18176779 + AT_rich Low_complexity Low_complexity 1 35 0 1993 107 18 4 chr2 232511096 232511376 -18176478 + AluSp SINE Alu 30 313 0 24 32 0 0 chr2 232511484 232511515 -18176339 + AT_rich Low_complexity Low_complexity 1 31 0 9758 36 5 3 chr2 232511576 232512747 -18175107 - L1PA5 LINE L1 -1160 4986 3814 7771 39 8 0 chr2 232512752 232513931 -18173923 + L1PA5 LINE L1 4955 6141 -13 2258 104 3 7 chr2 232514094 232514403 -18173451 - AluSq SINE Alu -5 308 1 414 276 125 19 chr2 232514474 232514738 -18173116 - L1MC4a LINE L1 -1880 5928 5637 2216 94 0 39 chr2 232515020 232515327 -18172527 - AluSg SINE Alu -10 300 6 2270 91 0 29 chr2 232515645 232515818 -18172036 - AluSg SINE Alu -12 298 136 2450 90 0 0 chr2 232515818 232516119 -18171735 - AluSq SINE Alu -12 301 1 2270 91 0 29 chr2 232516119 232516252 -18171602 - AluSg SINE Alu -174 136 1 304 135 27 0 chr2 232516790 232516864 -18170990 + (CA)n Simple_repeat Simple_repeat 1 76 0 478 193 12 0 chr2 232516899 232517070 -18170784 + (CA)n Simple_repeat Simple_repeat 1 173 0 2248 90 0 17 chr2 232517351 232517679 -18170175 - AluSx SINE Alu 0 312 1 2408 152 107 19 chr2 232517810 232518215 -18169639 - L1MB7 LINE L1 -2 6182 5727 1196 173 166 59 chr2 232518215 232518486 -18169368 - AluJo SINE Alu -2 300 1 2408 152 107 19 chr2 232518486 232518559 -18169295 - L1MB7 LINE L1 -457 5727 5662 189 343 10 29 chr2 232518599 232518701 -18169153 - MIR SINE MIR -80 182 83 2060 79 64 4 chr2 232519646 232519926 -18167928 + AluSp SINE Alu 1 297 -16 390 278 103 81 chr2 232521128 232521448 -18166406 - L1M2 LINE L1 -5849 1000 674 21 36 0 0 chr2 232521651 232521679 -18166175 + GC_rich Low_complexity Low_complexity 1 28 0 318 67 0 0 chr2 232521705 232521750 -18166104 + (CGG)n Simple_repeat Simple_repeat 2 46 0 225 65 0 0 chr2 232521908 232521939 -18165915 + (TCC)n Simple_repeat Simple_repeat 3 33 0 265 333 0 0 chr2 232521961 232522045 -18165809 + G-rich Low_complexity Low_complexity 1 84 0 22 35 0 0 chr2 232523712 232523741 -18164113 + AT_rich Low_complexity Low_complexity 1 29 0 485 229 106 76 chr2 232523741 232523977 -18163877 + MIR SINE MIR 20 262 0 233 200 20 0 chr2 232524630 232524680 -18163174 - L2 LINE L2 0 3313 3263 2211 101 0 7 chr2 232526272 232526568 -18161286 - AluSg SINE Alu -15 295 2 421 248 38 45 chr2 232526742 232526875 -18160979 + AluSq/x SINE Alu 3 134 -178 590 278 68 5 chr2 232527464 232527669 -18160185 + MLT1L LTR MaLR 169 386 -229 476 213 77 13 chr2 232527716 232527845 -18160009 + MLT1L LTR MaLR 449 611 -4 2188 159 58 21 chr2 232527855 232528086 -18159768 - MSTB2 LTR MaLR -7 450 229 1722 180 3 30 chr2 232528086 232528391 -18159463 - AluJb SINE Alu -15 297 1 2188 159 58 21 chr2 232528391 232528593 -18159261 - MSTB2 LTR MaLR -228 229 1 2117 80 39 11 chr2 232528779 232529065 -18158789 + AluSx SINE Alu 17 310 -2 1599 164 41 0 chr2 232529302 232529570 -18158284 + AluJo SINE Alu 21 299 -13 605 210 0 25 chr2 232530350 232530469 -18157385 + AluJo/FLAM SINE Alu 2 117 -195 2162 89 0 3 chr2 232530469 232530751 -18157103 + AluY SINE Alu 1 281 -30 1188 151 5 5 chr2 232530783 232530975 -18156879 + AluSg/x SINE Alu 110 301 -11 503 299 154 5 chr2 232531077 232531291 -18156563 - MIR SINE MIR -16 246 1 286 230 0 120 chr2 232531327 232531427 -18156427 - MER91A DNA MER1_type 0 196 109 289 313 0 24 chr2 232531494 232531577 -18156277 - MER91A DNA MER1_type -102 94 14 1250 294 51 34 chr2 232531658 232532164 -18155690 + LTR33 LTR ERVL 7 521 0 241 271 21 10 chr2 232532169 232532265 -18155589 - LTR67 LTR ERVL -33 524 428 189 0 0 0 chr2 232533421 232533442 -18154412 + (T)n Simple_repeat Simple_repeat 1 21 0 247 313 105 17 chr2 232533712 232533873 -18153981 + MIR SINE MIR 31 216 -46 1347 231 40 3 chr2 232534021 232534324 -18153530 + LTR40b LTR ERVL 1 314 -148 5194 105 144 118 chr2 232534326 232535874 -18151980 - pTR5 LTR ERV1 0 2438 743 726 146 22 65 chr2 232535874 232536033 -18151821 + LTR40a LTR ERVL 325 519 0 204 323 0 0 chr2 232536125 232536187 -18151667 + MIR SINE MIR 2 63 -199 1279 251 58 35 chr2 232536199 232536593 -18151261 - LTR16C LTR ERVL -2 489 87 544 244 44 6 chr2 232536678 232536838 -18151016 + MIR SINE MIR 97 262 0 2211 111 0 0 chr2 232537563 232537860 -18149994 - AluY SINE Alu -14 297 1 27 62 0 0 chr2 232538044 232538092 -18149762 + AT_rich Low_complexity Low_complexity 1 48 0 26 50 0 0 chr2 232538466 232538506 -18149348 + AT_rich Low_complexity Low_complexity 1 40 0 235 295 0 33 chr2 232540004 232540126 -18147728 + GA-rich Low_complexity Low_complexity 2 119 0 510 151 19 0 chr2 232540255 232540361 -18147493 - Charlie5 DNA MER1_type -33 2579 2472 1518 235 56 47 chr2 232540462 232540903 -18146951 - L2 LINE L2 -410 2904 2455 2213 94 10 29 chr2 232540903 232541211 -18146643 - AluSx SINE Alu -10 302 1 1518 235 56 47 chr2 232541211 232541360 -18146494 - L2 LINE L2 -859 2455 2309 414 226 20 0 chr2 232541361 232541463 -18146391 - L2 LINE L2 -2876 438 335 2099 100 4 0 chr2 232541507 232541776 -18146078 + AluSc SINE Alu 1 270 -39 2021 115 0 3 chr2 232541929 232542215 -18145639 + AluY SINE Alu 13 297 -14 280 230 9 106 chr2 232542553 232542599 -18145255 - MLT1L LTR MaLR -17 598 549 2228 129 6 23 chr2 232542599 232542941 -18144913 + MER1B DNA MER1_type 2 337 0 280 230 9 106 chr2 232542941 232543007 -18144847 - MLT1L LTR MaLR -66 549 497 226 366 50 0 chr2 232543394 232543495 -18144359 + L2 LINE L2 3208 3313 0 2414 72 0 0 chr2 232543606 232543898 -18143956 + AluY SINE Alu 1 292 -19 21 0 0 0 chr2 232543898 232543919 -18143935 + AT_rich Low_complexity Low_complexity 1 21 0 2199 109 0 0 chr2 232545195 232545488 -18142366 + AluSc SINE Alu 1 293 -16 1500 93 4 76 chr2 232545675 232545762 -18142092 - AluSx SINE Alu -92 220 128 2013 81 0 19 chr2 232545762 232546040 -18141814 - AluY SINE Alu 0 311 33 1500 93 4 76 chr2 232546040 232546189 -18141665 - AluSx SINE Alu -184 128 1 1530 244 53 20 chr2 232546516 232547220 -18140634 - L1MD2 LINE L1 0 6359 5539 27 0 0 0 chr2 232547225 232547252 -18140602 + AT_rich Low_complexity Low_complexity 1 27 0 1603 102 0 0 chr2 232547620 232547835 -18140019 - AluSg/x SINE Alu -8 302 88 422 242 141 10 chr2 232547931 232548143 -18139711 + MIR SINE MIR 16 248 -14 803 286 91 47 chr2 232548397 232549248 -18138606 - L2 LINE L2 0 3313 2435 2177 120 7 0 chr2 232549673 232549974 -18137880 + AluSx SINE Alu 1 303 -9 238 330 19 9 chr2 232550194 232550300 -18137554 + MIR SINE MIR 88 194 -68 532 265 0 18 chr2 232550385 232550555 -18137299 + MIR SINE MIR 83 249 -13 2234 87 0 48 chr2 232550564 232550874 -18136980 + AluY SINE Alu 1 295 -16 2161 102 0 14 chr2 232550970 232551265 -18136589 + AluSc SINE Alu 1 291 -18 454 306 114 46 chr2 232551373 232551680 -18136174 - MER102b DNA MER1_type -3 338 11 1026 168 49 10 chr2 232552475 232552678 -18135176 + MER20 DNA MER1_type 2 212 -7 1588 167 13 33 chr2 232553456 232553755 -18134099 - AluJb SINE Alu -17 295 3 2240 92 3 23 chr2 232553936 232554240 -18133614 - AluY SINE Alu -13 298 1 2092 128 0 44 chr2 232554240 232554560 -18133294 - AluSx SINE Alu -6 306 1 511 260 148 0 chr2 232554711 232554907 -18132947 - MIR SINE MIR -13 249 25 294 81 0 0 chr2 232555081 232555118 -18132736 + tRNA-Tyr-TAC tRNA tRNA 1 37 -39 1638 163 24 14 chr2 232555358 232555647 -18132207 + AluJo SINE Alu 1 292 -20 21 36 0 0 chr2 232555657 232555685 -18132169 + AT_rich Low_complexity Low_complexity 1 28 0 2270 189 22 22 chr2 232555760 232556211 -18131643 + MER66A LTR ERV1 28 478 0 2401 86 7 0 chr2 232557672 232557973 -18129881 - AluSq SINE Alu -10 303 1 2384 83 3 6 chr2 232558613 232558925 -18128929 - AluY SINE Alu 0 311 1 303 71 0 0 chr2 232559036 232559078 -18128776 + (CA)n Simple_repeat Simple_repeat 2 43 0 1451 188 14 18 chr2 232559552 232559829 -18128025 + AluJb SINE Alu 6 281 -31 24 32 0 0 chr2 232559832 232559863 -18127991 + AT_rich Low_complexity Low_complexity 1 31 0 2270 104 0 3 chr2 232560059 232560341 -18127513 + AluSq SINE Alu 6 288 -25 189 0 0 0 chr2 232560341 232560362 -18127492 + (GA)n Simple_repeat Simple_repeat 2 22 0 2270 104 0 3 chr2 232560362 232560376 -18127478 + AluSq SINE Alu 288 301 -12 242 122 122 0 chr2 232560752 232560793 -18127061 + AluJb SINE Alu 1 46 -262 6474 152 112 89 chr2 232560803 232561572 -18126282 + pTR5 LTR ERV1 769 1519 -919 2162 100 0 17 chr2 232561572 232561872 -18125982 - AluY SINE Alu -16 295 1 6474 152 112 89 chr2 232561872 232562734 -18125120 + pTR5 LTR ERV1 1519 2438 0 1603 171 0 0 chr2 232562737 232562988 -18124866 + AluJb SINE Alu 31 281 -31 22 0 0 0 chr2 232562989 232563011 -18124843 + GC_rich Low_complexity Low_complexity 1 22 0 1252 219 35 3 chr2 232563013 232563290 -18124564 + LTR45B LTR ERV1 185 584 -19 366 231 13 0 chr2 232563387 232563465 -18124389 - MER58 DNA MER1_type -6 2414 131 207 0 0 0 chr2 232563466 232563489 -18124365 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1459 141 53 56 chr2 232563502 232563821 -18124033 + L1MB5 LINE L1 5841 6158 -16 2314 56 0 11 chr2 232563837 232564146 -18123708 - AluY SINE Alu 0 306 1 269 309 12 12 chr2 232564217 232564301 -18123553 - MER58 DNA MER1_type -131 84 1 200 196 22 0 chr2 232564443 232564489 -18123365 - L2 LINE L2 -68 3245 3199 420 162 0 162 chr2 232564632 232564768 -18123086 + L1MB5 LINE L1 6052 6165 -9 1547 131 49 101 chr2 232564807 232564969 -18122885 - L1MB8 LINE L1 -4 6174 6005 1530 173 112 35 chr2 232564969 232565316 -18122538 + MLT1A2 LTR MaLR 1 374 0 1547 131 49 101 chr2 232565316 232565442 -18122412 - L1MB8 LINE L1 -173 6005 5906 2264 107 37 50 chr2 232565442 232565824 -18122030 + MER51B LTR ERV1 1 377 0 1547 131 49 101 chr2 232565824 232565900 -18121954 - L1MB8 LINE L1 -272 5906 5828 2363 101 3 0 chr2 232565914 232566221 -18121633 - AluY SINE Alu -3 308 1 1474 191 17 38 chr2 232566234 232566527 -18121327 - AluJo SINE Alu -21 291 5 2656 87 3 33 chr2 232566691 232566819 -18121035 - THE1A LTR MaLR 0 355 225 2187 122 0 0 chr2 232566819 232567115 -18120739 - AluSc SINE Alu -13 296 1 2656 87 3 33 chr2 232567115 232567352 -18120502 - THE1A LTR MaLR -130 225 1 8567 124 22 31 chr2 232567352 232567925 -18119929 - THE1A-int LTR MaLR 0 1651 1074 674 217 0 0 chr2 232567925 232568054 -18119800 + FLAM_C SINE Alu 5 133 0 8567 124 22 31 chr2 232568054 232569193 -18118661 - THE1A-int LTR MaLR -577 1074 1 2817 60 9 3 chr2 232569193 232569543 -18118311 - THE1A LTR MaLR 0 355 4 632 228 22 0 chr2 232569616 232569752 -18118102 - MER115 DNA AcHobo -2 691 553 1740 142 3 55 chr2 232569787 232570098 -18117756 - AluJo SINE Alu -17 295 1 1196 106 0 12 chr2 232570407 232570568 -18117286 - AluSg SINE Alu -151 159 1 789 311 33 7 chr2 232570568 232570874 -18116980 - L2 LINE L2 -2999 315 2 347 76 212 0 chr2 232571023 232571089 -18116765 - MADE1 DNA Mariner 0 80 1 2146 112 0 7 chr2 232571335 232571629 -18116225 - AluY SINE Alu -19 292 1 2075 136 0 22 chr2 232571735 232572052 -18115802 - AluSx SINE Alu -2 310 1 2239 121 0 0 chr2 232572452 232572757 -18115097 + AluSx SINE Alu 1 305 -7 2485 62 3 0 chr2 232572763 232573054 -18114800 + AluY SINE Alu 1 292 -19 677 104 0 19 chr2 232573154 232573234 -18114620 + AluSg/x SINE Alu 205 285 -27 180 0 0 0 chr2 232573234 232573254 -18114600 + (TAA)n Simple_repeat Simple_repeat 2 21 0 677 104 0 19 chr2 232573254 232573272 -18114582 + AluSg/x SINE Alu 285 303 -9 2037 182 0 5 chr2 232573272 232573641 -18114213 - L1MB2 LINE L1 -10 6161 5795 274 236 41 98 chr2 232573891 232574014 -18113840 - MLT1E LTR MaLR -458 135 20 933 132 0 7 chr2 232574086 232574222 -18113632 - AluJo SINE Alu -177 135 1 1727 207 0 0 chr2 232574312 232574616 -18113238 + AluJo SINE Alu 1 304 -8 221 356 34 75 chr2 232574880 232575119 -18112735 - L2 LINE L2 -51 3221 2993 362 127 0 18 chr2 232575126 232575181 -18112673 - THE1C LTR MaLR 0 375 322 2367 110 0 0 chr2 232575289 232575599 -18112255 - AluSg SINE Alu 0 310 1 486 239 76 33 chr2 232575981 232576225 -18111629 + L1M3 LINE L1 5558 5817 -317 2016 124 107 12 chr2 232576254 232576600 -18111254 + MSTA LTR MaLR 1 379 -49 1426 113 5 0 chr2 232576600 232576795 -18111059 + AluSp SINE Alu 102 297 -16 1714 105 0 4 chr2 232576925 232577154 -18110700 + AluSg/x SINE Alu 83 310 0 297 0 0 0 chr2 232578220 232578253 -18109601 + (TG)n Simple_repeat Simple_repeat 2 34 0 1830 130 0 70 chr2 232578257 232578557 -18109297 - AluSx SINE Alu -31 281 3 228 325 33 17 chr2 232578627 232578747 -18109107 + L2 LINE L2 3136 3257 -15 1876 173 0 3 chr2 232578752 232579053 -18108801 + AluJo SINE Alu 1 300 -12 398 77 0 0 chr2 232579161 232579213 -18108641 + Alu SINE Alu 1 52 -247 440 358 6 12 chr2 232579316 232579489 -18108365 - MER115 DNA AcHobo -521 172 1 378 226 157 63 chr2 232579707 232579937 -18107917 - AluJo SINE Alu -78 224 1 * 1056 290 77 82 chr2 232579921 232580508 -18107346 - MLT1K LTR MaLR 0 588 5 2179 126 0 0 chr2 232580715 232581016 -18106838 + AluSg SINE Alu 1 301 -9 308 175 0 0 chr2 232581241 232581298 -18106556 - MLT2B1 LTR ERVL 0 520 464 279 128 0 0 chr2 232581312 232581359 -18106495 - Alu SINE Alu -2 306 260 1573 208 128 2 chr2 232581367 232581766 -18106088 - MLT2B1 LTR ERVL -71 449 1 1944 136 39 0 chr2 232582102 232582388 -18105466 - AluSx SINE Alu -14 298 2 1845 146 100 0 chr2 232582860 232583190 -18104664 + MLT1C LTR MaLR 102 464 -3 364 251 104 16 chr2 232583190 232583314 -18104540 - MIR SINE MIR -62 146 13 327 286 14 68 chr2 232583319 232583390 -18104464 + MER5A DNA MER1_type 6 66 -123 2206 135 0 0 chr2 232583390 232583701 -18104153 + AluSx SINE Alu 1 311 -1 327 286 14 68 chr2 232583701 232583776 -18104078 + MER5A DNA MER1_type 66 144 -45 461 155 37 15 chr2 232584421 232584692 -18103162 + (TA)n Simple_repeat Simple_repeat 1 277 0 27 49 0 0 chr2 232584692 232584733 -18103121 + AT_rich Low_complexity Low_complexity 1 41 0 290 243 6 0 chr2 232584733 232584910 -18102944 + (TA)n Simple_repeat Simple_repeat 1 178 0 1065 249 91 48 chr2 232585168 232585694 -18102160 - MLT1H LTR MaLR 0 549 1 849 231 12 6 chr2 232585995 232586168 -18101686 + MER5A DNA MER1_type 16 189 0 2499 88 0 0 chr2 232586739 232587047 -18100807 - AluSx SINE Alu -4 308 1 922 259 79 62 chr2 232587467 232587935 -18099919 + MLT1H LTR MaLR 74 549 0 21 0 0 0 chr2 232587936 232587957 -18099897 + AT_rich Low_complexity Low_complexity 1 21 0 1173 87 0 7 chr2 232587963 232588112 -18099742 + AluSq/x SINE Alu 1 148 -164 195 204 82 20 chr2 232588270 232588319 -18099535 - L2 LINE L2 -15 3257 3206 584 63 0 0 chr2 232588524 232588603 -18099251 + L1PB1 LINE L1 5711 5789 -362 242 56 28 0 chr2 232588604 232588640 -18099214 + (TA)n Simple_repeat Simple_repeat 2 38 0 2588 90 8 3 chr2 232588645 232589010 -18098844 + L1PB1 LINE L1 5784 6150 -1 471 299 46 5 chr2 232589699 232589896 -18097958 + HERV16 LTR ERVL 2210 2414 -2582 2248 167 47 74 chr2 232590139 232590380 -18097474 + MLT1D LTR MaLR 3 249 -256 495 33 0 0 chr2 232590380 232590441 -18097413 + (TG)n Simple_repeat Simple_repeat 1 61 0 2248 167 47 74 chr2 232590441 232590713 -18097141 + MLT1D LTR MaLR 249 502 -3 645 223 17 29 chr2 232590746 232590921 -18096933 - MLT1L LTR MaLR -100 515 343 214 284 0 15 chr2 232591911 232591978 -18095876 + MIR SINE MIR 18 83 -125 858 76 0 0 chr2 232592056 232592175 -18095679 + (CTA)n Simple_repeat Simple_repeat 1 119 0 2389 98 0 0 chr2 232592175 232592482 -18095372 - AluY SINE Alu -2 309 3 428 332 109 23 chr2 232592485 232592705 -18095149 - MIR SINE MIR -4 258 20 586 220 16 55 chr2 232592763 232592945 -18094909 - MER5B DNA MER1_type -1 177 3 2379 72 3 44 chr2 232593231 232593552 -18094302 + AluY SINE Alu 1 308 -3 1480 133 4 0 chr2 232594563 232594803 -18093051 - L1PB1 LINE L1 -83 6068 5828 1911 104 60 83 chr2 232595844 232596228 -18091626 + THE1C LTR MaLR 1 375 0 241 326 184 14 chr2 232596355 232596502 -18091352 + MIR3 SINE MIR 36 207 -1 2031 132 26 0 chr2 232596539 232596843 -18091011 + AluSx SINE Alu 1 312 0 2122 124 30 24 chr2 232597234 232597565 -18090289 + MER1B DNA MER1_type 1 333 -4 703 288 95 3 chr2 232597575 232597860 -18089994 + MER102b DNA MER1_type 26 336 -5 2562 71 0 0 chr2 232598037 232598348 -18089506 - AluY SINE Alu 0 311 1 288 187 74 94 chr2 232599046 232599209 -18088645 - MER5A DNA MER1_type 0 178 26 2201 132 3 0 chr2 232600798 232601109 -18086745 - AluSx SINE Alu 0 312 1 512 322 29 6 chr2 232601217 232601388 -18086466 - MIR SINE MIR -70 192 18 1111 181 0 0 chr2 232602381 232602574 -18085280 - AluSg/x SINE Alu 0 309 117 344 290 65 0 chr2 232603125 232603218 -18084636 + MIR SINE MIR 2 100 -162 358 79 10 208 chr2 232603221 232603264 -18084590 + MLT1A2 LTR MaLR 1 15 -351 2073 103 20 27 chr2 232603264 232603556 -18084298 - AluSq SINE Alu -23 290 1 358 79 10 208 chr2 232603556 232603613 -18084241 + MLT1A2 LTR MaLR 15 82 -284 1451 227 60 8 chr2 232603624 232603797 -18084057 - MSTD LTR MaLR -5 391 228 252 0 0 0 chr2 232603797 232603825 -18084029 + (GA)n Simple_repeat Simple_repeat 1 28 0 1451 227 60 8 chr2 232603825 232604021 -18083833 - MSTD LTR MaLR -168 228 3 1488 154 39 28 chr2 232604022 232604308 -18083546 + MLT1A1 LTR MaLR 77 365 0 282 200 0 14 chr2 232605476 232605529 -18082325 - L1ME3 LINE L1 0 6162 6110 1967 191 56 54 chr2 232605529 232605860 -18081994 + MLT1D LTR MaLR 1 330 -175 2136 113 20 7 chr2 232605860 232606162 -18081692 - AluSx SINE Alu -6 306 1 1453 198 0 8 chr2 232606166 232606434 -18081420 - AluJb SINE Alu -10 302 37 1967 191 56 54 chr2 232606434 232606601 -18081253 + MLT1D LTR MaLR 332 505 0 282 200 0 14 chr2 232606601 232606617 -18081237 - L1ME3 LINE L1 -52 6110 6094 1461 207 25 12 chr2 232606617 232606940 -18080914 + MSTB LTR MaLR 85 411 -15 1621 210 107 0 chr2 232606953 232607400 -18080454 - L1ME3 LINE L1 -110 6052 5558 2354 105 0 0 chr2 232607888 232608193 -18079661 + AluSx SINE Alu 1 305 -7 725 236 0 0 chr2 232608352 232608496 -18079358 - MER82 DNA MER2_type 0 653 510 257 128 0 0 chr2 232608624 232608671 -18079183 - Alu SINE Alu 0 301 255 2206 128 0 0 chr2 232608703 232609008 -18078846 + AluSx SINE Alu 1 305 -7 756 152 30 24 chr2 232609016 232609181 -18078673 - L1MA8 LINE L1 -10 6281 6116 2072 204 18 9 chr2 232609181 232609636 -18078218 - MER82 DNA MER2_type -194 459 1 361 257 37 0 chr2 232609877 232609986 -18077868 - MIR3 SINE MIR -1 207 95 1695 148 76 4 chr2 232610098 232610375 -18077479 + AluJb SINE Alu 1 297 -15 399 119 0 0 chr2 232610375 232610442 -18077412 + (TA)n Simple_repeat Simple_repeat 1 67 0 22 0 0 0 chr2 232610814 232610836 -18077018 + AT_rich Low_complexity Low_complexity 1 22 0 1844 147 3 34 chr2 232610862 232611182 -18076672 - AluSx SINE Alu -2 310 1 641 65 41 16 chr2 232611190 232611313 -18076541 + (TA)n Simple_repeat Simple_repeat 1 126 0 189 0 0 0 chr2 232611340 232611361 -18076493 + (TG)n Simple_repeat Simple_repeat 2 22 0 216 0 0 0 chr2 232611364 232611388 -18076466 + (T)n Simple_repeat Simple_repeat 1 24 0 231 255 143 0 chr2 232611563 232611661 -18076193 - L1ME4a LINE L1 -8 6113 6002 1341 184 4 4 chr2 232612003 232612264 -18075590 - AluJb SINE Alu -51 261 1 359 238 60 0 chr2 232612275 232612359 -18075495 - L1MC4 LINE L1 -1339 6703 6615 189 0 0 0 chr2 232612422 232612443 -18075411 + (TG)n Simple_repeat Simple_repeat 2 22 0 207 0 0 0 chr2 232612446 232612469 -18075385 + (T)n Simple_repeat Simple_repeat 1 23 0 270 235 143 0 chr2 232612646 232612744 -18075110 - L1ME4a LINE L1 -8 6113 6002 310 254 0 85 chr2 232612955 232613085 -18074769 - L1ME4a LINE L1 -393 5728 5610 2368 75 7 0 chr2 232613570 232613862 -18073992 + AluY SINE Alu 3 296 -15 1986 149 16 10 chr2 232613905 232614213 -18073641 + AluSx SINE Alu 1 310 -2 315 0 0 0 chr2 232614259 232614294 -18073560 + (TG)n Simple_repeat Simple_repeat 2 36 0 202 263 100 12 chr2 232614469 232614549 -18073305 - MIR SINE MIR -64 144 58 416 133 0 13 chr2 232615224 232615299 -18072555 + (TTCC)n Simple_repeat Simple_repeat 1 74 0 841 139 0 0 chr2 232615299 232615421 -18072433 - FLAM_C SINE Alu -11 122 1 2098 103 0 4 chr2 232616343 232616624 -18071230 - AluSx SINE Alu 0 312 33 2078 117 17 0 chr2 232617627 232617926 -18069928 + AluSq SINE Alu 1 304 -9 655 288 86 41 chr2 232617932 232618224 -18069630 - L2 LINE L2 0 3313 3009 23 0 0 0 chr2 232618628 232618651 -18069203 + AT_rich Low_complexity Low_complexity 1 23 0 234 305 48 48 chr2 232618654 232618759 -18069095 + MIR SINE MIR 8 112 -150 203 266 127 13 chr2 232620039 232620118 -18067736 + MIR3 SINE MIR 92 179 -29 249 33 0 0 chr2 232620120 232620150 -18067704 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2170 95 7 3 chr2 232620150 232620433 -18067421 - AluSc SINE Alu -25 284 1 397 215 13 0 chr2 232620631 232620710 -18067144 - MIR SINE MIR -74 188 109 469 309 109 11 chr2 232620728 232620903 -18066951 - MIR3 SINE MIR -3 205 14 1366 174 64 60 chr2 232621070 232621247 -18066607 - AluJo SINE Alu -13 299 119 318 26 0 0 chr2 232621247 232621286 -18066568 + (TTTTC)n Simple_repeat Simple_repeat 3 41 0 1366 174 64 60 chr2 232621286 232621406 -18066448 - AluJo SINE Alu -193 119 1 983 183 27 54 chr2 232621696 232621920 -18065934 + MER20 DNA MER1_type 1 218 -1 2088 113 0 0 chr2 232622187 232622461 -18065393 - AluSc SINE Alu -3 306 33 424 349 123 8 chr2 232622791 232623026 -18064828 - MIR SINE MIR 0 262 1 202 211 0 0 chr2 232624645 232624683 -18063171 + (TG)n Simple_repeat Simple_repeat 1 38 0 249 410 8 0 chr2 232624943 232625065 -18062789 - L3 LINE CR1 -29 1548 1426 392 261 183 7 chr2 232625097 232625239 -18062615 - MIR SINE MIR -95 167 1 747 105 7 79 chr2 232625289 232625343 -18062511 - L1MA4 LINE L1 -1 6299 6243 2476 47 0 3 chr2 232625343 232625641 -18062213 - AluY SINE Alu -14 297 1 747 105 7 79 chr2 232625641 232625738 -18062116 - L1MA4 LINE L1 -57 6243 6159 448 350 106 19 chr2 232625748 232626059 -18061795 - L3 LINE CR1 -195 1382 1045 1298 153 0 33 chr2 232626297 232626512 -18061342 + AluJb SINE Alu 5 212 -100 831 103 0 0 chr2 232626612 232626719 -18061135 - AluSq/x SINE Alu -205 107 1 221 244 0 0 chr2 232626726 232626771 -18061083 + (CATA)n Simple_repeat Simple_repeat 3 47 0 406 256 8 41 chr2 232628015 232628092 -18059762 - Charlie8 DNA MER1_type -107 234 161 402 268 39 116 chr2 232628092 232628574 -18059280 - MER65A LTR ERV1 0 445 1 406 256 8 41 chr2 232628574 232628617 -18059237 - Charlie8 DNA MER1_type -180 161 118 2455 151 48 0 chr2 232628647 232628913 -18058941 - L1MA4 LINE L1 -5 6295 6030 667 218 109 7 chr2 232628913 232629213 -18058641 - L1PA15 LINE L1 -151 6014 5664 2384 88 3 0 chr2 232629217 232629524 -18058330 - AluY SINE Alu -3 308 1 1115 90 0 0 chr2 232629527 232629660 -18058194 - AluSq/x SINE Alu -179 133 1 8241 159 46 21 chr2 232629661 232631433 -18056421 - L1PA15 LINE L1 -686 5614 3771 2224 176 61 17 chr2 232631433 232631843 -18056011 + MSTA LTR MaLR 1 428 0 8241 159 46 21 chr2 232631843 232632412 -18055442 - L1PA15 LINE L1 -2529 3771 3218 1625 274 106 67 chr2 232633066 232633627 -18054227 + HAL1 LINE L1 3 541 -1966 2253 80 17 0 chr2 232633627 232633915 -18053939 - AluY SINE Alu -18 293 1 1625 274 106 67 chr2 232633915 232634403 -18053451 + HAL1 LINE L1 541 1093 -1414 304 140 0 0 chr2 232634486 232634536 -18053318 - MADE1 DNA Mariner -30 50 1 609 234 85 0 chr2 232634666 232634807 -18053047 + MLT1J2 LTR MaLR 23 175 -275 213 159 0 0 chr2 232635142 232635186 -18052668 + GA-rich Low_complexity Low_complexity 1 44 0 210 250 34 68 chr2 232635244 232635332 -18052522 - L2 LINE L2 -8 3305 3221 224 250 18 18 chr2 232635464 232635520 -18052334 - L2 LINE L2 -497 2817 2762 21 36 0 0 chr2 232635625 232635653 -18052201 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 232635799 232635827 -18052027 + AT_rich Low_complexity Low_complexity 1 28 0 243 88 0 0 chr2 232636825 232636859 -18050995 + (T)n Simple_repeat Simple_repeat 1 34 0 2337 92 0 0 chr2 232637060 232637354 -18050500 - AluY SINE Alu -17 294 1 2287 92 0 0 chr2 232637680 232637962 -18049892 + AluSx SINE Alu 17 298 -14 4600 175 58 14 chr2 232638169 232638975 -18048879 - MER21B LTR ERV1 -21 842 1 239 156 22 0 chr2 232639029 232639074 -18048780 - MLT2B1 LTR ERVL -2 412 367 201 147 0 0 chr2 232639074 232639108 -18048746 + (TG)n Simple_repeat Simple_repeat 2 35 0 282 235 0 0 chr2 232639138 232639219 -18048635 + (TA)n Simple_repeat Simple_repeat 2 82 0 342 98 0 0 chr2 232639246 232639297 -18048557 + (CA)n Simple_repeat Simple_repeat 2 52 0 488 163 219 24 chr2 232639304 232639427 -18048427 - THE1B LTR MaLR -217 147 1 431 181 0 0 chr2 232639430 232639502 -18048352 + MLT2B1 LTR ERVL 409 480 -40 246 32 0 0 chr2 232639505 232639536 -18048318 + (TG)n Simple_repeat Simple_repeat 2 32 0 1672 154 108 25 chr2 232639569 232639894 -18047960 + MSTA LTR MaLR 77 428 0 10301 128 14 45 chr2 232639896 232640480 -18047374 + MSTA-int LTR MaLR 3 604 -976 2521 60 0 3 chr2 232640480 232640778 -18047076 - AluY SINE Alu -13 298 2 10301 128 14 45 chr2 232640778 232641822 -18046032 + MSTA-int LTR MaLR 604 1580 0 1792 152 179 8 chr2 232641825 232642188 -18045666 + MSTA LTR MaLR 4 428 0 1296 181 35 83 chr2 232642225 232642268 -18045586 - MLT2B1 LTR ERVL -221 299 255 4786 150 45 4 chr2 232642268 232643020 -18044834 - LTR39 LTR ERV1 0 783 1 1296 181 35 83 chr2 232643020 232643290 -18044564 - MLT2B1 LTR ERVL -265 255 1 2157 136 0 0 chr2 232643290 232643585 -18044269 + AluSx SINE Alu 1 295 -17 1068 191 64 0 chr2 232643707 232643927 -18043927 - L1MB7 LINE L1 -87 6097 5864 1407 214 30 17 chr2 232644103 232644279 -18043575 - AluJo SINE Alu -13 299 116 198 0 0 0 chr2 232644279 232644301 -18043553 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1407 214 30 17 chr2 232644301 232644419 -18043435 - AluJo SINE Alu -196 116 1 995 139 6 29 chr2 232645620 232645793 -18042061 - AluY SINE Alu -7 304 136 3902 172 29 27 chr2 232646123 232646495 -18041359 - L1MB2 LINE L1 -2 6169 5799 225 65 0 0 chr2 232646495 232646526 -18041328 + (CA)n Simple_repeat Simple_repeat 1 31 0 3902 172 29 27 chr2 232646526 232646751 -18041103 - L1MB2 LINE L1 -372 5799 5568 3497 109 26 24 chr2 232646751 232646890 -18040964 + LOR1a LTR ERV1 1 138 -359 2338 100 0 7 chr2 232646890 232647200 -18040654 + AluY SINE Alu 1 308 -3 3497 109 26 24 chr2 232647200 232647556 -18040298 + LOR1a LTR ERV1 138 497 0 3902 172 29 27 chr2 232647556 232647690 -18040164 - L1MB2 LINE L1 -603 5568 5436 1785 181 0 3 chr2 232647910 232648197 -18039657 - AluJo SINE Alu -26 286 1 2136 112 14 0 chr2 232648209 232648505 -18039349 - AluSx SINE Alu -11 301 2 265 183 33 0 chr2 232648546 232648606 -18039248 + L1MC4 LINE L1 6641 6702 -1340 1010 328 106 11 chr2 232648706 232649469 -18038385 + L2 LINE L2 2467 3313 0 6571 31 1 1 chr2 232649638 232650402 -18037452 - L1PA4 LINE L1 -12 6143 5380 249 211 18 0 chr2 232650577 232650634 -18037220 + MIR3 SINE MIR 151 208 0 412 241 65 19 chr2 232651200 232651308 -18036546 + MER5A DNA MER1_type 1 113 -76 230 286 79 0 chr2 232651343 232651406 -18036448 + MLT1K LTR MaLR 189 256 -332 585 245 55 3 chr2 232651413 232651556 -18036298 - MER5A DNA MER1_type -25 164 1 239 309 0 0 chr2 232651835 232651903 -18035951 - MLT1I LTR MaLR -260 149 82 713 282 95 48 chr2 232651968 232651993 -18035861 + MLT1K LTR MaLR 277 299 -289 2315 113 0 0 chr2 232651993 232652295 -18035559 - AluSq SINE Alu -11 302 1 713 282 95 48 chr2 232652295 232652521 -18035333 + MLT1K LTR MaLR 299 540 -48 860 269 83 65 chr2 232653148 232653606 -18034248 - MLT1J LTR MaLR -45 466 1 445 280 61 33 chr2 232654358 232654573 -18033281 + MIR SINE MIR 23 247 -15 2277 103 3 16 chr2 232655066 232655378 -18032476 - AluSx SINE Alu -2 310 3 22 35 0 0 chr2 232655626 232655655 -18032199 + AT_rich Low_complexity Low_complexity 1 29 0 2480 150 49 36 chr2 232655921 232656367 -18031487 + LTR47A LTR ERVL 1 452 0 2186 82 11 7 chr2 232656697 232657034 -18030820 - AluSc SINE Alu 0 338 1 559 313 32 52 chr2 232657158 232657243 -18030611 - MIR SINE MIR -16 246 161 2724 151 45 19 chr2 232657243 232657727 -18030127 - LOR1a LTR ERV1 0 497 1 559 313 32 52 chr2 232657727 232657890 -18029964 - MIR SINE MIR -101 161 3 247 181 110 110 chr2 232658003 232658130 -18029724 - L2 LINE L2 0 3313 3187 5464 72 41 1 chr2 232658601 232659263 -18028591 - LTR12 LTR ERV1 0 688 1 219 36 0 0 chr2 232660616 232660644 -18027210 + (CCA)n Simple_repeat Simple_repeat 2 29 0 2135 102 0 3 chr2 232660705 232661040 -18026814 + AluY SINE Alu 1 334 0 2548 70 0 10 chr2 232661089 232661403 -18026451 + AluY SINE Alu 1 311 0 308 284 23 0 chr2 232661413 232661501 -18026353 + L1MC4 LINE L1 6614 6703 -1339 2409 89 23 0 chr2 232661559 232661861 -18025993 + AluSx SINE Alu 1 309 -3 387 55 0 82 chr2 232662370 232662443 -18025411 - L1MA4A LINE L1 -1 6302 6236 2373 132 30 30 chr2 232662443 232662807 -18025047 + THE1B LTR MaLR 1 364 0 7119 92 3 0 chr2 232662807 232663726 -18024128 + THE1B-int LTR MaLR 1 922 -658 3253 206 36 25 chr2 232663723 232664409 -18023445 - L1M2 LINE L1 -6154 695 2 * 225 225 175 0 chr2 232664875 232664955 -18022899 - MIR SINE MIR -86 176 83 245 271 0 0 chr2 232666179 232666227 -18021627 - LTR16A LTR ERVL -15 435 388 2466 61 0 0 chr2 232666599 232666895 -18020959 - AluY SINE Alu -13 298 3 225 119 0 0 chr2 232666899 232666941 -18020913 + (T)n Simple_repeat Simple_repeat 1 42 0 200 291 135 34 chr2 232667979 232668127 -18019727 - MER5A DNA MER1_type 0 189 27 564 308 46 71 chr2 232668190 232668515 -18019339 - MER102b DNA MER1_type -15 326 10 2384 72 3 0 chr2 232669137 232669429 -18018425 + AluSg SINE Alu 1 293 -17 723 275 22 6 chr2 232669997 232670175 -18017679 - MLT1I LTR MaLR -203 206 26 2220 120 0 0 chr2 232672514 232672805 -18015049 - AluSx SINE Alu -21 291 1 1295 248 28 3 chr2 232672873 232673191 -18014663 + MER87 LTR ERV1 216 541 0 2066 119 7 13 chr2 232673255 232673557 -18014297 - AluSq SINE Alu -13 300 1 238 179 26 166 chr2 232676194 232676270 -18011584 + MER113 DNA MER1_type? 7 53 -468 1658 162 23 55 chr2 232676270 232676579 -18011275 - AluJo SINE Alu -3 309 11 238 179 26 166 chr2 232676579 232676653 -18011201 + MER113 DNA MER1_type? 53 136 -385 391 291 84 28 chr2 232677049 232677228 -18010626 + LTR33 LTR ERVL 2 190 -331 678 247 60 17 chr2 232677228 232677247 -18010607 + MER96B DNA MER1_type? 173 190 -227 2277 118 0 10 chr2 232677247 232677560 -18010294 - AluSx SINE Alu 0 312 3 678 247 60 17 chr2 232677560 232677775 -18010079 + MER96B DNA MER1_type? 190 417 0 488 272 64 15 chr2 232677873 232678075 -18009779 + LTR33 LTR ERVL 301 512 -9 2422 64 6 16 chr2 232678958 232679270 -18008584 - AluSc SINE Alu 0 309 1 555 288 71 50 chr2 232679534 232679774 -18008080 + L2 LINE L2 3027 3271 -1 227 318 57 0 chr2 232679814 232679902 -18007952 - MIR3 SINE MIR -32 176 84 28 29 0 0 chr2 232680793 232680828 -18007026 + AT_rich Low_complexity Low_complexity 1 35 0 1897 153 3 0 chr2 232680828 232681115 -18006739 - AluSx SINE Alu -24 288 1 228 333 71 0 chr2 232681619 232681718 -18006136 - MIR SINE MIR -90 172 67 285 325 129 69 chr2 232682035 232682454 -18005400 + L2 LINE L2 2827 3270 -2 210 37 0 0 chr2 232682544 232682571 -18005283 + (TAATG)n Simple_repeat Simple_repeat 4 30 0 2006 165 38 35 chr2 232682579 232683128 -18004726 + MLT2A2 LTR ERVL 1 553 -1 1962 137 7 0 chr2 232684559 232684836 -18003018 - AluSx SINE Alu -13 299 21 21 36 0 0 chr2 232684952 232684980 -18002874 + AT_rich Low_complexity Low_complexity 1 28 0 387 311 93 31 chr2 232685192 232685353 -18002501 + L2 LINE L2 3102 3272 0 2230 89 3 7 chr2 232685960 232686253 -18001601 + AluSc SINE Alu 1 292 -17 230 250 0 0 chr2 232686402 232686454 -18001400 + (ATG)n Simple_repeat Simple_repeat 3 54 0 2444 80 0 0 chr2 232688614 232688914 -17998940 - AluY SINE Alu -11 300 1 423 132 0 13 chr2 232689288 232689364 -17998490 - MER116 DNA Mariner 0 80 6 2335 76 10 0 chr2 232690828 232691119 -17996735 - AluY SINE Alu -17 294 1 1992 85 7 43 chr2 232691255 232691536 -17996318 + AluSg SINE Alu 1 271 -39 241 361 100 8 chr2 232693520 232693650 -17994204 + L2 LINE L2 3126 3267 -5 211 308 65 19 chr2 232694815 232694922 -17992932 + MIR SINE MIR 125 236 -26 885 160 28 0 chr2 232694934 232695078 -17992776 + FRAM SINE Alu 1 146 -30 2497 64 0 0 chr2 232695123 232695419 -17992435 - AluSq SINE Alu -17 296 1 441 353 54 18 chr2 232695588 232695809 -17992045 + MIR SINE MIR 13 241 -21 23 0 0 0 chr2 232695905 232695928 -17991926 + AT_rich Low_complexity Low_complexity 1 23 0 31 58 0 0 chr2 232695947 232695999 -17991855 + AT_rich Low_complexity Low_complexity 1 52 0 2213 92 0 39 chr2 232696807 232697112 -17990742 - AluSg1 SINE Alu -16 293 1 2209 113 3 0 chr2 232697620 232697921 -17989933 - AluSx SINE Alu -10 302 1 22 0 0 0 chr2 232698120 232698142 -17989712 + AT_rich Low_complexity Low_complexity 1 22 0 877 275 65 71 chr2 232700658 232701120 -17986734 + MLT1K LTR MaLR 42 500 -88 243 0 0 0 chr2 232701386 232701413 -17986441 + (TTA)n Simple_repeat Simple_repeat 2 28 0 860 198 0 36 chr2 232701416 232701583 -17986271 - AluJo SINE Alu -30 282 122 477 302 170 31 chr2 232703355 232703779 -17984075 - L2 LINE L2 -1 3312 2830 1924 161 3 10 chr2 232703974 232704273 -17983581 - AluJb SINE Alu -15 297 1 2584 214 25 31 chr2 232704343 232705054 -17982800 - L1ME1 LINE L1 -4 6162 5456 315 177 48 0 chr2 232705065 232705127 -17982727 + L1M LINE L1 5341 5405 -761 4327 124 46 49 chr2 232706049 232706830 -17981024 - MER4E LTR ERV1 0 779 1 297 0 0 0 chr2 232709339 232709372 -17978482 + (TG)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr2 232711923 232711945 -17975909 + AT_rich Low_complexity Low_complexity 1 22 0 1598 172 11 25 chr2 232711962 232712247 -17975607 - AluJo SINE Alu -31 281 1 470 311 55 6 chr2 232712259 232712442 -17975412 - MIR SINE MIR -18 244 53 4585 139 50 68 chr2 232714281 232715174 -17972680 + L1MA9 LINE L1 5042 5949 -363 648 208 0 34 chr2 232715174 232715323 -17972531 + L1PB4 LINE L1 6013 6156 0 4585 139 50 68 chr2 232715323 232715523 -17972331 + L1MA9 LINE L1 5949 6151 -161 15106 27 1 0 chr2 232715523 232718081 -17969773 - L1PA4 LINE L1 -3 6152 3594 4585 139 50 68 chr2 232718081 232718234 -17969620 + L1MA9 LINE L1 6151 6276 -36 2081 137 0 0 chr2 232718234 232718527 -17969327 - AluSx SINE Alu -15 297 5 4585 139 50 68 chr2 232718527 232718559 -17969295 + L1MA9 LINE L1 6276 6307 -5 322 278 22 0 chr2 232718593 232718683 -17969171 - MIR SINE MIR -25 237 146 2198 133 0 0 chr2 232719557 232719857 -17967997 - AluSx SINE Alu -12 300 1 1792 160 46 27 chr2 232720042 232720410 -17967444 + THE1C LTR MaLR 1 375 0 21 57 0 0 chr2 232720616 232720651 -17967203 + AT_rich Low_complexity Low_complexity 1 35 0 2004 131 10 3 chr2 232720789 232721079 -17966775 + AluSx SINE Alu 1 292 -20 23 0 0 0 chr2 232721159 232721182 -17966672 + AT_rich Low_complexity Low_complexity 1 23 0 205 89 44 0 chr2 232721238 232721283 -17966571 + (TA)n Simple_repeat Simple_repeat 1 47 0 187 197 40 53 chr2 232722785 232722861 -17964993 + L2 LINE L2 2698 2772 -542 312 237 40 0 chr2 232723196 232723272 -17964582 + Tigger3(Golem) DNA MER2_type 3 81 -2948 682 164 0 16 chr2 232723278 232723400 -17964454 + Tigger3(Golem) DNA MER2_type 2919 3038 0 2432 57 3 3 chr2 232723434 232723733 -17964121 - AluY SINE Alu -12 299 1 236 248 48 40 chr2 232723751 232723876 -17963978 + LTR67 LTR ERVL 432 557 0 403 197 25 12 chr2 232723938 232724061 -17963793 - MER5A DNA MER1_type 0 189 17 470 224 10 0 chr2 232724109 232724207 -17963647 + MER81 DNA DNA 1 99 -15 1639 136 84 7 chr2 232727498 232727771 -17960083 + AluJb SINE Alu 11 304 -8 2420 80 6 13 chr2 232728010 232728321 -17959533 - AluSc SINE Alu 0 309 1 23 33 0 0 chr2 232729099 232729129 -17958725 + AT_rich Low_complexity Low_complexity 1 30 0 1798 168 26 16 chr2 232729465 232729769 -17958085 - AluSx SINE Alu -5 307 1 2344 94 0 3 chr2 232730014 232730313 -17957541 - AluSg1 SINE Alu -11 298 1 2070 122 14 0 chr2 232731089 232731399 -17956455 - AluSx SINE Alu 0 314 1 1782 161 3 45 chr2 232731642 232731775 -17956079 + AluJb SINE Alu 1 138 -174 494 16 16 0 chr2 232731775 232731838 -17956016 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 1782 161 3 45 chr2 232731838 232732014 -17955840 + AluJb SINE Alu 138 297 -15 2381 106 0 0 chr2 232732016 232732327 -17955527 + AluSx SINE Alu 1 311 -1 471 233 55 27 chr2 232732561 232732707 -17955147 - MIR3 SINE MIR -27 181 32 1309 324 68 12 chr2 232732776 232733615 -17954239 + HERV16 LTR ERVL 396 1281 -3715 1558 299 60 9 chr2 232733854 232734493 -17953361 + HERV16 LTR ERVL 1606 2276 -2720 295 200 13 27 chr2 232734602 232734677 -17953177 + HERV16 LTR ERVL 4619 4692 -304 264 286 10 0 chr2 232734725 232734823 -17953031 + HERV16 LTR ERVL 5180 5278 -376 842 256 126 14 chr2 232735061 232735409 -17952445 + LTR16B LTR ERVL 68 454 -10 26 30 0 0 chr2 232735529 232735562 -17952292 + AT_rich Low_complexity Low_complexity 1 33 0 1763 148 14 7 chr2 232735955 232736269 -17951585 - AluJb SINE Alu 0 316 1 704 243 224 0 chr2 232736290 232736553 -17951301 - MER115 DNA AcHobo 0 693 372 406 292 111 72 chr2 232736708 232737085 -17950769 - MER115 DNA AcHobo -300 393 2 444 271 84 27 chr2 232737275 232737500 -17950354 - L1ME3A LINE L1 -236 5934 5697 781 289 106 19 chr2 232737800 232738167 -17949687 + L2 LINE L2 30 428 -2886 534 249 69 132 chr2 232738167 232738687 -17949167 + L2 LINE L2 2662 3163 -150 189 0 0 0 chr2 232738690 232738711 -17949143 + (TC)n Simple_repeat Simple_repeat 2 22 0 2066 99 0 18 chr2 232738713 232738986 -17948868 - AluSq SINE Alu -45 268 1 300 261 275 7 chr2 232740625 232740767 -17947087 - MIR3 SINE MIR -9 199 20 2513 64 0 0 chr2 232741636 232741933 -17945921 - AluY SINE Alu -14 297 1 24 0 0 0 chr2 232743799 232743823 -17944031 + AT_rich Low_complexity Low_complexity 1 24 0 1796 166 23 31 chr2 232743956 232744119 -17943735 + L1MD1 LINE L1 5538 5701 -541 2106 65 3 90 chr2 232744119 232744440 -17943414 - AluY SINE Alu -18 293 1 1796 166 23 31 chr2 232744440 232744661 -17943193 + L1MD1 LINE L1 5701 5919 -323 566 179 8 0 chr2 232744669 232744786 -17943068 + L1MD1 LINE L1 6125 6242 0 5752 144 18 5 chr2 232745165 232746422 -17941432 + L1MA8 LINE L1 5016 6287 -4 192 77 0 0 chr2 232747613 232747639 -17940215 + (TG)n Simple_repeat Simple_repeat 1 26 0 387 208 26 0 chr2 232747964 232748041 -17939813 - L2 LINE L2 -208 3064 2986 412 162 98 128 chr2 232748053 232748206 -17939648 + SATR1 Satellite Satellite 32 275 -284 236 336 30 7 chr2 232748942 232749080 -17938774 - MIR SINE MIR -74 134 36 2346 95 3 0 chr2 232749158 232749463 -17938391 - AluSp SINE Alu -7 306 1 2276 109 0 0 chr2 232750763 232751057 -17936797 - AluSx SINE Alu -18 294 1 307 235 15 0 chr2 232751370 232751438 -17936416 + MER5A DNA MER1_type 3 71 -118 569 144 0 11 chr2 232751440 232751530 -17936324 - AluJb SINE Alu -14 298 210 2289 99 10 0 chr2 232751534 232751828 -17936026 - AluSc SINE Alu -12 297 1 21 0 0 0 chr2 232752589 232752610 -17935244 + AT_rich Low_complexity Low_complexity 1 21 0 1702 223 84 7 chr2 232752857 232753319 -17934535 + MLT1D LTR MaLR 1 498 -7 685 287 54 9 chr2 232753501 232753724 -17934130 + MIR SINE MIR 5 237 -25 23 0 0 0 chr2 232753990 232754013 -17933841 + AT_rich Low_complexity Low_complexity 1 23 0 2218 99 0 14 chr2 232754013 232754307 -17933547 - AluSc SINE Alu -19 290 1 2023 153 172 2 chr2 232754973 232755379 -17932475 + MER41E LTR ERV1 1 475 -37 1532 167 75 33 chr2 232755643 232756003 -17931851 + THE1C LTR MaLR 1 375 0 26 0 0 0 chr2 232756482 232756508 -17931346 + AT_rich Low_complexity Low_complexity 1 26 0 480 35 0 0 chr2 232759874 232759932 -17927922 + (CCAA)n Simple_repeat Simple_repeat 2 59 0 333 0 0 0 chr2 232760098 232760135 -17927719 + (CA)n Simple_repeat Simple_repeat 2 38 0 1543 229 98 2 chr2 232760793 232761191 -17926663 - MER63B DNA MER1_type 0 436 1 568 278 19 25 chr2 232761524 232761686 -17926168 + MLT1G1 LTR MaLR 430 590 -5 33 43 0 0 chr2 232763078 232763125 -17924729 + AT_rich Low_complexity Low_complexity 1 47 0 2170 92 14 0 chr2 232763410 232763693 -17924161 + AluSg SINE Alu 1 287 -23 305 320 63 71 chr2 232763968 232764221 -17923633 + L3 LINE CR1 1261 1511 -66 23 54 0 0 chr2 232765406 232765443 -17922411 + AT_rich Low_complexity Low_complexity 1 37 0 460 276 42 68 chr2 232765458 232765594 -17922260 - MIR SINE MIR -58 204 73 1624 172 3 59 chr2 232765594 232765914 -17921940 - AluJo SINE Alu -10 302 1 460 276 42 68 chr2 232765914 232765969 -17921885 - MIR SINE MIR -189 73 18 219 238 148 57 chr2 232766355 232766496 -17921358 - MIR3 SINE MIR -62 146 3 1216 87 0 0 chr2 232766780 232766929 -17920925 - AluSg SINE Alu -161 149 1 995 250 18 0 chr2 232768441 232768661 -17919193 - MER58A DNA MER1_type 0 224 1 2344 39 3 14 chr2 232768784 232769091 -17918763 - AluY SINE Alu 0 304 1 2144 109 7 7 chr2 232769566 232769860 -17917994 + AluSx SINE Alu 1 294 -18 292 208 0 0 chr2 232770846 232770899 -17916955 - MIR SINE MIR 0 262 210 213 151 0 0 chr2 232771175 232771228 -17916626 + CT-rich Low_complexity Low_complexity 2 54 0 2831 264 71 23 chr2 232771282 232772416 -17915438 - L1MC4 LINE L1 -102 7706 6624 297 0 0 0 chr2 232772416 232772449 -17915405 + (CA)n Simple_repeat Simple_repeat 2 34 0 2831 264 71 23 chr2 232772449 232772641 -17915213 - L1MC4 LINE L1 -1184 6624 6443 209 243 14 0 chr2 232773648 232773718 -17914136 + (TA)n Simple_repeat Simple_repeat 2 72 0 26 30 0 0 chr2 232774045 232774078 -17913776 + AT_rich Low_complexity Low_complexity 1 33 0 2838 91 5 3 chr2 232775329 232775703 -17912151 + THE1C LTR MaLR 1 375 0 901 302 170 29 chr2 232775805 232776156 -17911698 + L2 LINE L2 1866 2166 -1147 2380 109 0 0 chr2 232776156 232776467 -17911387 - AluSx SINE Alu -1 311 1 901 302 170 29 chr2 232776467 232777385 -17910469 + L2 LINE L2 2166 3312 -1 512 296 79 11 chr2 232777609 232777798 -17910056 - MIR SINE MIR -13 249 48 1717 154 12 68 chr2 232778634 232778959 -17908895 + AluJb SINE Alu 1 307 -5 26 0 0 0 chr2 232780879 232780905 -17906949 + AT_rich Low_complexity Low_complexity 1 26 0 702 305 141 21 chr2 232781843 232782325 -17905529 + L2 LINE L2 1774 2313 -1001 257 361 46 8 chr2 232782965 232783095 -17904759 - L2 LINE L2 -243 3070 2936 358 379 53 19 chr2 232783583 232783789 -17904065 - MIR SINE MIR -34 228 16 2228 127 0 9 chr2 232784815 232785130 -17902724 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 232785564 232785586 -17902268 + AT_rich Low_complexity Low_complexity 1 22 0 357 252 136 41 chr2 232786293 232786440 -17901414 - L2 LINE L2 -1 3312 3152 232 309 52 0 chr2 232786919 232787024 -17900830 + MIR SINE MIR 64 178 -81 270 164 0 0 chr2 232787518 232787573 -17900281 + (TGAA)n Simple_repeat Simple_repeat 2 56 0 215 274 48 16 chr2 232788634 232788696 -17899158 + L2 LINE L2 3205 3268 -4 424 333 16 8 chr2 232788897 232789026 -17898828 - MIR SINE MIR -112 150 21 245 310 10 30 chr2 232789056 232789156 -17898698 + L3 LINE CR1 1453 1550 -27 472 319 127 57 chr2 232790260 232790326 -17897528 + L2 LINE L2 2893 2953 -360 2281 110 0 0 chr2 232790326 232790636 -17897218 - AluSx SINE Alu -2 310 1 472 319 127 57 chr2 232790636 232790955 -17896899 + L2 LINE L2 2953 3305 -8 1516 144 45 68 chr2 232792108 232792400 -17895454 - AluSx SINE Alu -27 285 1 607 257 54 22 chr2 232793011 232793287 -17894567 - L1MA9 LINE L1 -38 6274 5990 * 1359 183 4 0 chr2 232793284 232793547 -17894307 + L1M2 LINE L1 5525 5788 -524 315 0 0 0 chr2 232793558 232793593 -17894261 + (TG)n Simple_repeat Simple_repeat 2 36 0 254 160 20 0 chr2 232793597 232793647 -17894207 - L1MA9 LINE L1 -534 5778 5728 427 247 0 18 chr2 232793650 232793816 -17894038 + (TATG)n Simple_repeat Simple_repeat 4 166 0 273 194 32 0 chr2 232793823 232793885 -17893969 - L1M2 LINE L1 -519 5793 5730 237 209 0 0 chr2 232793885 232793928 -17893926 + (TG)n Simple_repeat Simple_repeat 1 43 0 600 205 0 27 chr2 232793932 232794117 -17893737 + (TATG)n Simple_repeat Simple_repeat 1 180 0 298 183 0 43 chr2 232794131 232794224 -17893630 + (TATG)n Simple_repeat Simple_repeat 2 90 0 798 184 56 15 chr2 232794225 232794421 -17893433 + L1MA9 LINE L1 5775 5978 -334 284 136 0 17 chr2 232794757 232794816 -17893038 - L1MB4 LINE L1 0 6180 6123 194 260 104 21 chr2 232795132 232795228 -17892626 + L2 LINE L2 1081 1184 -2130 574 265 56 9 chr2 232795879 232796129 -17891725 + L1ME2 LINE L1 5743 5940 -224 389 20 20 0 chr2 232796404 232796454 -17891400 + (TGGA)n Simple_repeat Simple_repeat 2 52 0 319 267 58 119 chr2 232797330 232797453 -17890401 - L2 LINE L2 -79 3234 3105 2104 141 3 6 chr2 232797453 232797765 -17890089 + AluSx SINE Alu 1 311 -1 319 267 58 119 chr2 232797765 232798068 -17889786 - L2 LINE L2 -208 3105 2834 514 299 80 20 chr2 232798447 232798648 -17889206 + MIR SINE MIR 36 248 -14 486 300 152 23 chr2 232800131 232800508 -17887346 + L2 LINE L2 2619 3040 -273 381 235 83 76 chr2 232800869 232801001 -17886853 - L2 LINE L2 -1 3312 3180 224 254 17 0 chr2 232801017 232801076 -17886778 - L2 LINE L2 -241 3072 3013 240 35 0 0 chr2 232801152 232801181 -17886673 + (TG)n Simple_repeat Simple_repeat 2 30 0 189 0 0 0 chr2 232801180 232801201 -17886653 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 22 35 0 0 chr2 232801736 232801765 -17886089 + AT_rich Low_complexity Low_complexity 1 29 0 2150 116 0 26 chr2 232801765 232802076 -17885778 + AluSx SINE Alu 1 303 -9 227 304 80 40 chr2 232802349 232802474 -17885380 - L3b LINE CR1 -146 1437 1308 3024 91 36 0 chr2 232802602 232803044 -17884810 - L1MA2 LINE L1 0 6304 5847 201 347 13 13 chr2 232803201 232803276 -17884578 + L3b LINE CR1 1506 1580 -3 2319 59 3 0 chr2 232803924 232804212 -17883642 - AluY SINE Alu -22 289 1 702 326 42 16 chr2 232804685 232804998 -17882856 - L2 LINE L2 -4 3309 2989 285 305 30 91 chr2 232805200 232805397 -17882457 + MIR3 SINE MIR 14 198 -10 318 286 189 29 chr2 232805660 232805835 -17882019 - MIR SINE MIR -34 228 26 373 240 285 22 chr2 232805935 232806114 -17881740 + MIR SINE MIR 32 257 -5 252 217 0 87 chr2 232806308 232806377 -17881477 + L3 LINE CR1 1512 1574 -3 267 305 17 25 chr2 232806951 232807069 -17880785 - MER5A DNA MER1_type -35 154 38 * 430 293 0 0 chr2 232806968 232807074 -17880780 + MER5A DNA MER1_type 63 168 -21 181 189 0 0 chr2 232807282 232807319 -17880535 + L2 LINE L2 3275 3311 -2 347 256 91 8 chr2 232807875 232807996 -17879858 + MER94 DNA DNA 2 132 -2 2328 55 0 17 chr2 232808149 232808441 -17879413 + AluY SINE Alu 1 287 -24 183 42 0 0 chr2 232808449 232808473 -17879381 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2788 16 0 6 chr2 232810572 232810886 -17876968 - AluYb8 SINE Alu -6 312 1 261 320 161 42 chr2 232810997 232811635 -17876219 + L2 LINE L2 1921 2634 -680 186 43 0 0 chr2 232811795 232811818 -17876036 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 604 111 0 128 chr2 232811820 232811937 -17875917 - AluY SINE Alu -31 280 179 469 201 31 19 chr2 232812113 232812441 -17875413 + (CA)n Simple_repeat Simple_repeat 1 332 0 21 82 0 0 chr2 232813026 232813075 -17874779 + AT_rich Low_complexity Low_complexity 1 49 0 2204 70 0 4 chr2 232813372 232813643 -17874211 + AluSx SINE Alu 35 304 -8 2150 104 34 0 chr2 232814283 232814458 -17873396 - AluSp SINE Alu -6 307 116 221 0 0 33 chr2 232814458 232814488 -17873366 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2150 104 34 0 chr2 232814488 232814609 -17873245 - AluSp SINE Alu -197 116 1 1931 115 0 74 chr2 232815111 232815282 -17872572 - AluSq SINE Alu -24 289 150 227 31 31 0 chr2 232815282 232815314 -17872540 + (TA)n Simple_repeat Simple_repeat 2 34 0 1931 115 0 74 chr2 232815314 232815454 -17872400 - AluSq SINE Alu -163 150 1 21 0 0 0 chr2 232815717 232815738 -17872116 + AT_rich Low_complexity Low_complexity 1 21 0 1706 159 32 36 chr2 232816053 232816362 -17871492 + AluJb SINE Alu 1 308 -4 291 192 20 20 chr2 232816704 232816850 -17871004 + (CA)n Simple_repeat Simple_repeat 1 146 0 2486 63 0 3 chr2 232817143 232817445 -17870409 + AluY SINE Alu 1 301 -10 262 267 12 0 chr2 232817693 232817779 -17870075 - MER103 DNA DNA -5 161 75 216 111 0 0 chr2 232817780 232817816 -17870038 + (TG)n Simple_repeat Simple_repeat 1 36 0 312 27 0 0 chr2 232817904 232817941 -17869913 + (TG)n Simple_repeat Simple_repeat 2 38 0 342 67 0 0 chr2 232818153 232818198 -17869656 + (TG)n Simple_repeat Simple_repeat 2 46 0 1620 218 0 10 chr2 232818226 232818534 -17869320 - AluJo SINE Alu -7 305 1 340 241 69 0 chr2 232819380 232819467 -17868387 + MIR SINE MIR 81 173 -89 204 231 19 19 chr2 232820009 232820061 -17867793 + MER5A DNA MER1_type 1 52 -137 449 275 85 28 chr2 232820152 232820399 -17867455 + MIR SINE MIR 2 262 0 299 268 38 1 chr2 232821061 232821209 -17866645 - L1ME LINE L1 -739 5431 5280 220 179 0 0 chr2 232821226 232821265 -17866589 + (TG)n Simple_repeat Simple_repeat 2 40 0 2102 92 3 36 chr2 232821437 232821782 -17866072 - AluY SINE Alu 0 311 1 257 252 65 49 chr2 232821816 232821939 -17865915 - L1ME LINE L1 -1147 4999 4875 623 314 127 48 chr2 232822016 232822940 -17864914 + L1 LINE L1 3594 4590 -1556 215 304 0 0 chr2 232823509 232823555 -17864299 - L2 LINE L2 0 3272 3227 994 165 16 6 chr2 232823677 232823859 -17863995 + MSTB LTR MaLR 1 184 -242 1164 110 0 0 chr2 232823859 232824004 -17863850 + AluSq/x SINE Alu 1 145 -168 2207 128 0 0 chr2 232824004 232824308 -17863546 + AluSx SINE Alu 1 304 -8 180 359 98 0 chr2 232825586 232825678 -17862176 - L2 LINE L2 -597 2717 2617 2784 159 17 13 chr2 232826641 232827164 -17860690 - L1MB7 LINE L1 0 6184 5660 207 339 51 0 chr2 232828753 232828812 -17859042 - L2 LINE L2 -19 3253 3192 509 139 90 66 chr2 232828883 232829005 -17858849 + FLAM_C SINE Alu 1 125 -18 190 244 22 0 chr2 232829022 232829067 -17858787 - L2 LINE L2 -12 3260 3215 693 292 107 45 chr2 232829302 232829999 -17857855 - L2 LINE L2 -4 3309 2564 202 254 77 100 chr2 232830136 232830266 -17857588 + L2 LINE L2 3182 3308 -5 926 222 92 44 chr2 232830702 232831017 -17856837 - MER58B DNA MER1_type -5 336 7 485 267 84 55 chr2 232831436 232831638 -17856216 + L2 LINE L2 2926 3133 -180 184 308 48 48 chr2 232832030 232832238 -17855616 - L2 LINE L2 -421 2893 2686 2107 131 10 10 chr2 232832501 232832813 -17855041 + AluSx SINE Alu 1 312 0 430 70 0 0 chr2 232836688 232836745 -17851109 + tRNA-His-CAC tRNA tRNA 1 57 -18 524 299 94 5 chr2 232838060 232838261 -17849593 + MIR SINE MIR 1 219 -43 256 139 0 0 chr2 232838375 232838418 -17849436 + L2 LINE L2 3271 3313 0 326 289 79 26 chr2 232839068 232839258 -17848596 + L1ME4a LINE L1 5720 5919 -202 271 68 23 0 chr2 232839345 232839389 -17848465 + L1ME4a LINE L1 6060 6104 -17 189 343 29 14 chr2 232839773 232839843 -17848011 + MIR SINE MIR 35 105 -157 23 33 0 0 chr2 232840079 232840109 -17847745 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 232842022 232842043 -17845811 + AT_rich Low_complexity Low_complexity 1 21 0 196 357 76 29 chr2 232843722 232843893 -17843961 - MIR SINE MIR -56 206 28 2294 104 0 0 chr2 232844144 232844443 -17843411 + AluSx SINE Alu 1 299 -13 2271 116 0 0 chr2 232846334 232846645 -17841209 - AluY SINE Alu 0 311 1 550 217 77 72 chr2 232847060 232847267 -17840587 - MIR SINE MIR -42 220 13 213 175 25 0 chr2 232847699 232847739 -17840115 + (TA)n Simple_repeat Simple_repeat 2 42 0 1031 203 23 23 chr2 232847811 232848028 -17839826 + MER20B DNA MER1_type 3 219 0 308 276 79 13 chr2 232849505 232849657 -17838197 + Charlie7 DNA MER1_type 34 195 -2417 475 326 50 31 chr2 232849700 232849961 -17837893 + L2 LINE L2 3045 3310 -3 379 214 51 0 chr2 232849973 232850071 -17837783 + Charlie7 DNA MER1_type 603 705 -1907 798 247 85 25 chr2 232851690 232851925 -17835929 + MIR SINE MIR 9 257 -5 204 343 109 51 chr2 232851924 232852198 -17835656 - L2 LINE L2 -364 2950 2661 * 670 248 87 62 chr2 232852328 232852570 -17835284 - MIR SINE MIR 0 262 15 310 299 102 15 chr2 232853111 232853248 -17834606 + MIR SINE MIR 32 180 -82 237 180 0 0 chr2 232853375 232853425 -17834429 + (TATG)n Simple_repeat Simple_repeat 3 52 0 1456 230 49 82 chr2 232853633 232854226 -17833628 - MLT1E2 LTR MaLR 0 626 78 2767 7 0 0 chr2 232854634 232854933 -17832921 - AluYa5 SINE Alu -12 299 1 641 226 119 8 chr2 232855750 232855985 -17831869 - MER20B DNA MER1_type -18 765 505 373 288 82 24 chr2 232857504 232857674 -17830180 - L2 LINE L2 0 3313 3134 286 294 61 56 chr2 232857671 232857885 -17829969 + MIR SINE MIR 6 220 -42 * 2178 83 26 35 chr2 232859975 232860287 -17827567 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr2 232860669 232860690 -17827164 + AT_rich Low_complexity Low_complexity 1 21 0 2698 105 5 0 chr2 232861335 232861708 -17826146 + THE1C LTR MaLR 1 375 0 188 310 99 0 chr2 232862184 232862255 -17825599 + L2 LINE L2 3235 3312 -1 1109 126 32 16 chr2 232862724 232862914 -17824940 - THE1B LTR MaLR -171 193 1 544 253 219 26 chr2 232863881 232863908 -17823946 + L2 LINE L2 524 544 -2770 2335 144 16 10 chr2 232863908 232864296 -17823558 + MLT1B LTR MaLR 1 390 0 544 253 219 26 chr2 232864296 232864501 -17823353 + L2 LINE L2 544 801 -2513 395 287 18 18 chr2 232864666 232864833 -17823021 + L2 LINE L2 800 966 -2348 183 80 0 0 chr2 232864847 232864872 -17822982 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 431 308 53 6 chr2 232865208 232865377 -17822477 - HAL1 LINE L1 -87 2420 2244 268 225 113 0 chr2 232865395 232865475 -17822379 - HAL1 LINE L1 -337 2170 2082 1022 289 58 33 chr2 232865754 232866305 -17821549 - HAL1 LINE L1 -745 1762 1198 332 328 64 6 chr2 232867155 232867326 -17820528 - L2 LINE L2 0 3313 3133 564 263 226 3 chr2 232867632 232867982 -17819872 + L2 LINE L2 440 867 -2447 3320 176 5 26 chr2 232868084 232868132 -17819722 + MER54A LTR ERVL 86 134 -767 234 0 0 0 chr2 232868132 232868158 -17819696 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1957 132 20 3 chr2 232868161 232868456 -17819398 - AluSq SINE Alu -10 303 4 3320 176 5 26 chr2 232868456 232869006 -17818848 + MER54A LTR ERVL 136 675 -226 1108 167 81 0 chr2 232869122 232869332 -17818522 + MER54A LTR ERVL 675 901 0 194 241 0 37 chr2 232869332 232869386 -17818468 + L2 LINE L2 2257 2308 -1006 363 277 54 7 chr2 232869557 232869705 -17818149 - L1MDb LINE L1 -6006 403 249 240 312 21 21 chr2 232869868 232869961 -17817893 - MIR SINE MIR -4 258 166 2324 94 0 3 chr2 232869966 232870263 -17817591 - AluY SINE Alu -15 296 1 362 322 73 66 chr2 232870406 232870692 -17817162 - L1ME LINE L1 -351 5770 5483 206 330 41 10 chr2 232870747 232870844 -17817010 - L2 LINE L2 0 3313 3214 549 294 5 15 chr2 232871296 232871493 -17816361 - MLT1E LTR MaLR -398 195 1 1572 103 14 0 chr2 232872128 232872341 -17815513 - AluSq SINE Alu -10 303 88 209 299 90 0 chr2 232872450 232872517 -17815337 - L2 LINE L2 -38 3275 3203 224 344 10 10 chr2 232872622 232872718 -17815136 - MIR3 SINE MIR -36 172 77 1382 270 66 23 chr2 232873146 232873682 -17814172 - L2 LINE L2 -1 3312 2756 202 274 65 0 chr2 232875944 232876006 -17811848 - MIR SINE MIR -95 167 102 403 279 9 0 chr2 232876474 232876585 -17811269 - MER81 DNA DNA -1 113 2 2552 50 6 0 chr2 232878390 232878709 -17809145 + L1PA5 LINE L1 5828 6148 -6 2323 95 7 0 chr2 232878769 232879073 -17808781 - AluSp SINE Alu -7 306 1 309 358 15 30 chr2 232879082 232879216 -17808638 - MIR3 SINE MIR -64 144 13 258 114 0 0 chr2 232880529 232880573 -17807281 + MADE1 DNA Mariner 2 45 -35 231 224 0 0 chr2 232880595 232880644 -17807210 - MADE1 DNA Mariner -31 49 1 187 143 18 18 chr2 232880738 232880794 -17807060 + (TG)n Simple_repeat Simple_repeat 1 56 0 238 297 49 103 chr2 232883063 232883189 -17804665 - MER5A DNA MER1_type -14 175 61 2251 117 0 3 chr2 232883189 232883496 -17804358 + AluSx SINE Alu 4 309 -3 238 297 49 103 chr2 232883496 232883554 -17804300 - MER5A DNA MER1_type -128 61 1 701 179 10 92 chr2 232883861 232884068 -17803786 - MER20B DNA MER1_type 0 219 30 1463 196 32 21 chr2 232884143 232884423 -17803431 - AluJo SINE Alu -19 293 11 597 298 25 43 chr2 232884819 232885054 -17802800 + MIR SINE MIR 28 258 -4 221 330 80 10 chr2 232886052 232886152 -17801702 + MIR SINE MIR 16 122 -86 23 33 0 0 chr2 232886270 232886300 -17801554 + AT_rich Low_complexity Low_complexity 1 30 0 219 146 0 0 chr2 232887010 232887051 -17800803 + (TTA)n Simple_repeat Simple_repeat 2 42 0 2644 35 3 0 chr2 232887572 232887882 -17799972 - AluY SINE Alu 0 311 1 323 268 63 21 chr2 232888085 232888227 -17799627 + MER103 DNA DNA 7 154 -12 2232 90 0 0 chr2 232888241 232888649 -17799205 - AluSc SINE Alu 0 408 1 610 285 25 13 chr2 232889747 232889982 -17797872 + Charlie8 DNA MER1_type 39 276 -2141 21 36 0 0 chr2 232890833 232890861 -17796993 + AT_rich Low_complexity Low_complexity 1 28 0 859 191 0 38 chr2 232891330 232891513 -17796341 - FRAM SINE Alu 0 176 1 2494 54 0 3 chr2 232893927 232894224 -17793630 - AluY SINE Alu -15 296 1 21 36 0 0 chr2 232894750 232894778 -17793076 + AT_rich Low_complexity Low_complexity 1 28 0 315 272 92 58 chr2 232897128 232897301 -17790553 - MIR SINE MIR -36 226 48 299 277 156 21 chr2 232897844 232897985 -17789869 + MIR3 SINE MIR 44 203 -5 514 230 0 0 chr2 232898393 232898506 -17789348 + MER3 DNA MER1_type 55 167 -42 1493 200 21 5 chr2 232898515 232898900 -17788954 + MER3 DNA MER1_type 2233 2623 0 693 280 4 50 chr2 232899968 232900071 -17787783 - MIR SINE MIR 0 262 156 1915 166 72 68 chr2 232900071 232900570 -17787284 + MLT1D LTR MaLR 1 501 -4 693 280 4 50 chr2 232900570 232900705 -17787149 - MIR SINE MIR -106 156 35 218 267 0 17 chr2 232900799 232900859 -17786995 + L2 LINE L2 2997 3055 -217 319 111 49 12 chr2 232901636 232901717 -17786137 + (TA)n Simple_repeat Simple_repeat 1 84 0 2192 52 1 0 chr2 232902958 232903248 -17784606 + L1PA8 LINE L1 5869 6161 -11 23 0 0 0 chr2 232903521 232903544 -17784310 + AT_rich Low_complexity Low_complexity 1 23 0 519 177 89 103 chr2 232903580 232903783 -17784071 - MER58C DNA MER1_type 0 215 16 2135 116 3 3 chr2 232904997 232905289 -17782565 + AluSg SINE Alu 1 292 -18 1173 295 82 11 chr2 232905594 232905974 -17781880 + L2 LINE L2 2262 2668 -646 924 288 4 4 chr2 232906033 232906266 -17781588 - MIR SINE MIR -21 241 9 733 266 60 12 chr2 232906272 232906590 -17781264 + L2 LINE L2 2741 3067 -246 * 907 237 36 18 chr2 232906583 232906807 -17781047 - MIR SINE MIR -16 246 19 340 319 16 22 chr2 232906992 232907177 -17780677 + MER5A DNA MER1_type 4 187 -2 296 308 0 10 chr2 232907304 232907408 -17780446 + L2 LINE L2 3211 3313 0 267 291 55 27 chr2 232907563 232907673 -17780181 + MIR SINE MIR 25 137 -125 1237 133 0 0 chr2 232911685 232911858 -17775996 - AluSg/x SINE Alu -12 300 128 198 150 0 0 chr2 232912206 232912246 -17775608 + (TTATA)n Simple_repeat Simple_repeat 5 44 0 1442 230 38 16 chr2 232913282 232913454 -17774400 + MLT1B LTR MaLR 3 170 -220 183 42 0 0 chr2 232913454 232913478 -17774376 + (TC)n Simple_repeat Simple_repeat 2 25 0 1442 230 38 16 chr2 232913478 232913675 -17774179 + MLT1B LTR MaLR 170 380 -10 212 296 128 16 chr2 232914778 232914903 -17772951 + MIR SINE MIR 96 234 -28 690 255 51 10 chr2 232915258 232915454 -17772400 - MIR SINE MIR -21 241 38 192 125 0 0 chr2 232916265 232916297 -17771557 + (CAT)n Simple_repeat Simple_repeat 1 32 0 369 285 93 40 chr2 232917146 232917297 -17770557 + MIR SINE MIR 3 161 -101 231 61 0 0 chr2 232917430 232917463 -17770391 + (TTG)n Simple_repeat Simple_repeat 2 34 0 218 246 18 0 chr2 232918282 232918339 -17769515 + (TTA)n Simple_repeat Simple_repeat 2 59 0 403 301 75 30 chr2 232919582 232919715 -17768139 + MIR3 SINE MIR 65 203 -5 318 333 53 53 chr2 232920075 232920264 -17767590 + MIR SINE MIR 60 248 -14 447 273 31 23 chr2 232921062 232921190 -17766664 + MIR SINE MIR 3 131 -131 1840 218 49 51 chr2 232921653 232922185 -17765669 - MLT1F LTR MaLR 0 542 12 433 259 83 0 chr2 232923201 232923309 -17764545 + MIR SINE MIR 36 152 -110 369 181 42 0 chr2 232923322 232923394 -17764460 + MER94 DNA DNA 1 75 -59 325 100 17 17 chr2 232924035 232924095 -17763759 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 2122 101 0 0 chr2 232924096 232924374 -17763480 - AluSx SINE Alu -34 278 1 2080 140 0 0 chr2 232925751 232926036 -17761818 + AluSx SINE Alu 1 285 -27 213 94 0 0 chr2 232926065 232926097 -17761757 + (TC)n Simple_repeat Simple_repeat 1 32 0 286 184 105 0 chr2 232926097 232926173 -17761681 - FLAM SINE Alu -5 128 45 429 103 0 0 chr2 232926294 232926362 -17761492 + (TCCC)n Simple_repeat Simple_repeat 1 68 0 426 288 8 16 chr2 232926374 232926499 -17761355 - L2 LINE L2 -1 3312 3189 402 39 0 0 chr2 232927039 232927091 -17760763 + (CA)n Simple_repeat Simple_repeat 1 52 0 2011 125 21 0 chr2 232927547 232927834 -17760020 + AluSx SINE Alu 4 296 -16 2401 84 3 0 chr2 232928136 232928434 -17759420 - AluY SINE Alu -12 299 1 1735 185 12 6 chr2 232928490 232928831 -17759023 - MLT1A1 LTR MaLR 0 365 23 194 377 23 31 chr2 232928863 232928993 -17758861 - L2 LINE L2 -185 3087 2959 1973 151 13 0 chr2 232929886 232930191 -17757663 - AluJb SINE Alu -3 309 1 911 244 82 58 chr2 232930930 232931381 -17756473 + MLT1C LTR MaLR 6 467 0 406 206 38 76 chr2 232931381 232931512 -17756342 - MIR SINE MIR -116 146 21 996 259 33 38 chr2 232932266 232932745 -17755109 + MER113 DNA MER1_type? 1 477 -44 24 0 0 0 chr2 232932952 232932976 -17754878 + AT_rich Low_complexity Low_complexity 1 24 0 280 387 42 7 chr2 232933908 232934050 -17753804 + L3 LINE CR1 232 378 -1199 496 330 175 7 chr2 232934312 232934751 -17753103 + L3 LINE CR1 790 1302 -275 252 362 17 17 chr2 232934886 232935002 -17752852 + L3 LINE CR1 1308 1423 -154 786 178 0 0 chr2 232935018 232935147 -17752707 - FLAM_A SINE Alu -4 129 1 241 322 133 44 chr2 232935489 232935669 -17752185 - MIR3 SINE MIR -10 198 3 207 146 0 0 chr2 232936488 232936529 -17751325 + (A)n Simple_repeat Simple_repeat 1 41 0 574 288 109 33 chr2 232936772 232937102 -17750752 - MLT1H LTR MaLR 0 549 195 322 330 73 22 chr2 232939546 232939725 -17748129 - MIR SINE MIR 0 262 75 192 40 0 0 chr2 232940934 232940959 -17746895 + (T)n Simple_repeat Simple_repeat 1 25 0 498 256 0 0 chr2 232943337 232943517 -17744337 + (TA)n Simple_repeat Simple_repeat 1 180 0 2106 96 0 64 chr2 232943560 232943872 -17743982 - AluSx SINE Alu -20 292 1 309 145 0 0 chr2 232944242 232944304 -17743550 + (GA)n Simple_repeat Simple_repeat 2 63 0 410 31 103 0 chr2 232945337 232945434 -17742420 + (TA)n Simple_repeat Simple_repeat 2 108 0 490 212 7 7 chr2 232945474 232945620 -17742234 + (TA)n Simple_repeat Simple_repeat 2 147 0 339 238 6 119 chr2 232945624 232945792 -17742062 + L1MC3 LINE L1 6549 6678 -1107 207 214 0 0 chr2 232947145 232947187 -17740667 + T-rich Low_complexity Low_complexity 1 42 0 243 270 203 0 chr2 232948885 232948959 -17738895 + MIR SINE MIR 5 93 -169 322 181 51 2 chr2 232948988 232949060 -17738794 + MIR SINE MIR 55 129 -79 2374 85 0 0 chr2 232949768 232950063 -17737791 - AluSp SINE Alu -18 295 1 520 245 91 35 chr2 232950164 232950526 -17737328 + L1ME LINE L1 5369 5760 -410 * 2190 232 125 23 chr2 232950514 232951297 -17736557 + L1MC4 LINE L1 7180 8042 0 1948 138 26 29 chr2 232951335 232951646 -17736208 + AluSg SINE Alu 1 310 0 21 57 0 0 chr2 232952649 232952684 -17735170 + AT_rich Low_complexity Low_complexity 1 35 0 2316 133 51 19 chr2 232954142 232954557 -17733297 + MSTA LTR MaLR 1 428 0 1689 244 113 9 chr2 232954777 232955326 -17732528 + MLT1E2 LTR MaLR 16 621 -5 226 243 81 63 chr2 232955772 232955883 -17731971 + MIR SINE MIR 18 130 -78 1985 152 0 0 chr2 232955893 232956199 -17731655 - AluSx SINE Alu 0 306 1 2236 125 0 6 chr2 232956589 232956902 -17730952 + AluSx SINE Alu 1 311 -1 321 298 87 0 chr2 232957733 232957837 -17730017 - L2 LINE L2 -5 3267 3155 333 357 9 0 chr2 232958882 232958994 -17728860 - MIR3 SINE MIR -15 193 81 2280 96 7 0 chr2 232959919 232960210 -17727644 - AluSx SINE Alu -19 293 1 531 317 103 9 chr2 232960940 232961164 -17726690 + MIR SINE MIR 2 246 -16 229 321 36 54 chr2 232961404 232961572 -17726282 - L2 LINE L2 -71 3242 3078 241 241 74 93 chr2 232961648 232961756 -17726098 - L2 LINE L2 -198 3074 2969 319 277 143 9 chr2 232961773 232961885 -17725969 - MIR SINE MIR -55 153 27 447 0 15 31 chr2 232962251 232962316 -17725538 + (TA)n Simple_repeat Simple_repeat 1 64 0 1607 213 21 27 chr2 232962398 232962774 -17725080 - MLT1A2 LTR MaLR 0 374 1 344 257 7 18 chr2 232963214 232963353 -17724501 - MER5A DNA MER1_type -3 186 12 339 325 117 0 chr2 232964277 232964440 -17723414 + MIR SINE MIR 68 249 -13 216 146 42 0 chr2 232964799 232964847 -17723007 + A-rich Low_complexity Low_complexity 1 50 0 269 211 0 0 chr2 232965733 232965790 -17722064 - L1ME3A LINE L1 -17 6153 6097 243 0 0 0 chr2 232966414 232966441 -17721413 + (TC)n Simple_repeat Simple_repeat 2 28 0 312 27 0 0 chr2 232967237 232967274 -17720580 + (TG)n Simple_repeat Simple_repeat 1 37 0 26 30 0 0 chr2 232969111 232969144 -17718710 + GC_rich Low_complexity Low_complexity 1 33 0 25 65 0 0 chr2 232969481 232969527 -17718327 + GC_rich Low_complexity Low_complexity 1 46 0 427 291 0 81 chr2 232969803 232969975 -17717879 - L2 LINE L2 0 3313 3156 249 265 44 0 chr2 232970892 232970960 -17716894 + L2 LINE L2 3241 3311 -2 277 296 316 0 chr2 232971704 232971900 -17715954 + MIR SINE MIR 1 258 -4 21 0 0 0 chr2 232972288 232972309 -17715545 + AT_rich Low_complexity Low_complexity 1 21 0 229 306 121 57 chr2 232972559 232972683 -17715171 - L2 LINE L2 -7 3265 3134 242 224 0 13 chr2 232972892 232972968 -17714886 + CT-rich Low_complexity Low_complexity 3 77 0 30 0 0 0 chr2 232973706 232973736 -17714118 + AT_rich Low_complexity Low_complexity 1 30 0 6118 53 18 4 chr2 232973736 232974693 -17713161 - L1PA8 LINE L1 -10 6162 5127 182 163 93 0 chr2 232974735 232974778 -17713076 - MIR SINE MIR -67 141 95 218 244 0 0 chr2 232975478 232975523 -17712331 + L3 LINE CR1 1334 1378 -199 257 312 50 31 chr2 232975747 232976148 -17711706 - L1 LINE L1 -2387 3759 3351 28 0 0 0 chr2 232976184 232976212 -17711642 + AT_rich Low_complexity Low_complexity 1 28 0 497 262 98 45 chr2 232976270 232976606 -17711248 - L1MC4 LINE L1 -150 7892 7539 2306 106 0 0 chr2 232976637 232976940 -17710914 - AluSg SINE Alu -7 303 1 28 48 0 0 chr2 232976966 232977008 -17710846 + AT_rich Low_complexity Low_complexity 1 42 0 5786 122 23 5 chr2 232977021 232978087 -17709767 - L1MA5A LINE L1 -65 6232 5142 3806 65 8 0 chr2 232978539 232979030 -17708824 + L1PA5 LINE L1 5660 6154 0 246 241 36 9 chr2 232979045 232979157 -17708697 - L1M4 LINE L1 -808 5338 5224 1454 145 14 0 chr2 232980257 232980478 -17707376 + AluSg/x SINE Alu 76 299 -11 207 0 0 0 chr2 232980557 232980580 -17707274 + (TG)n Simple_repeat Simple_repeat 2 24 0 2083 138 3 0 chr2 232980599 232980896 -17706958 - AluSq SINE Alu -15 298 1 2052 117 0 38 chr2 232981155 232981472 -17706382 + AluSx SINE Alu 1 305 -7 200 335 80 0 chr2 232981529 232981613 -17706241 - MIR SINE MIR -65 143 62 437 323 76 36 chr2 232982040 232982291 -17705563 - MIR SINE MIR 0 262 2 436 265 204 59 chr2 232982801 232983208 -17704646 - MLT1H LTR MaLR -4 545 80 1115 177 22 69 chr2 232983608 232984301 -17703553 - L1MC1 LINE L1 -446 5887 5156 1280 195 94 6 chr2 232984315 232984662 -17703192 + MSTD LTR MaLR 1 428 0 6786 228 23 38 chr2 232984662 232986605 -17701249 - L1MC1 LINE L1 -998 5148 3241 1895 105 16 0 chr2 232986605 232986863 -17700991 - AluSg SINE Alu -3 307 46 6786 228 23 38 chr2 232986863 232987157 -17700697 - L1MC1 LINE L1 -2905 3241 2944 980 276 90 66 chr2 232987163 232988276 -17699578 + L1M4 LINE L1 2680 3861 -2285 980 54 78 0 chr2 232988276 232988405 -17699449 - MER85 DNA T2_type 0 139 1 980 276 90 66 chr2 232988405 232989197 -17698657 + L1M4 LINE L1 3861 4632 -1514 272 273 109 62 chr2 232990272 232990400 -17697454 - L2 LINE L2 0 3272 3139 497 232 151 101 chr2 232991182 232991540 -17696314 - MLT1D LTR MaLR 0 505 130 2078 153 137 11 chr2 232991593 232991973 -17695881 - MSTA LTR MaLR 0 428 1 21 71 0 0 chr2 232992064 232992106 -17695748 + AT_rich Low_complexity Low_complexity 1 42 0 297 333 29 9 chr2 232992888 232992993 -17694861 + MER63A DNA MER1_type 96 202 -8 1559 139 102 45 chr2 232992998 232993351 -17694503 + THE1C LTR MaLR 3 375 0 9094 141 22 33 chr2 232993354 232994884 -17692970 + THE1B-int LTR MaLR 4 1516 -64 847 195 6 13 chr2 232994884 232995043 -17692811 - MER2 DNA MER2_type -187 158 1 2249 134 8 30 chr2 232995144 232995516 -17692338 + THE1B LTR MaLR 1 364 0 255 227 0 0 chr2 232995541 232995585 -17692269 + MIR SINE MIR 62 105 -157 405 0 0 0 chr2 232996157 232996202 -17691652 + (TG)n Simple_repeat Simple_repeat 2 46 0 708 285 60 22 chr2 232997298 232997721 -17690133 + MLT1H LTR MaLR 2 589 -1 601 254 83 21 chr2 232997790 232998030 -17689824 - MER102a DNA MER1_type -6 324 70 279 0 0 0 chr2 232998038 232998069 -17689785 + (CA)n Simple_repeat Simple_repeat 2 32 0 279 79 0 0 chr2 232998868 232998906 -17688948 + (TG)n Simple_repeat Simple_repeat 1 38 0 352 265 41 61 chr2 232999752 232999899 -17687955 + MER5A DNA MER1_type 21 164 -25 469 252 0 9 chr2 233000918 233001029 -17686825 + L2 LINE L2 3192 3301 -12 252 100 0 0 chr2 233001032 233001072 -17686782 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 626 180 31 0 chr2 233001525 233001723 -17686131 + GA-rich Low_complexity Low_complexity 1 204 0 269 334 86 67 chr2 233001918 233002232 -17685622 + L2 LINE L2 2950 3269 -3 2196 241 48 55 chr2 233003134 233003859 -17683995 + L1MD2 LINE L1 5627 6346 -13 342 0 0 0 chr2 233003968 233004006 -17683848 + (TTA)n Simple_repeat Simple_repeat 2 39 0 209 244 11 100 chr2 233004304 233004394 -17683460 + L2 LINE L2 3105 3186 -86 608 316 162 32 chr2 233004493 233004924 -17682930 - MLT1K LTR MaLR -24 564 78 2043 141 0 0 chr2 233005946 233006245 -17681609 - AluSx SINE Alu -13 299 1 423 304 11 126 chr2 233006611 233006992 -17680862 + L2 LINE L2 2927 3263 -9 200 344 150 11 chr2 233007108 233007288 -17680566 + L2 LINE L2 2254 2458 -856 832 258 66 42 chr2 233007288 233007618 -17680236 - MER102a DNA MER1_type -1 329 11 307 329 88 7 chr2 233008490 233008627 -17679227 - MER115 DNA AcHobo -544 149 2 2349 133 11 11 chr2 233011073 233011448 -17676406 + THE1C LTR MaLR 1 375 0 258 325 13 13 chr2 233012107 233012184 -17675670 - MIR SINE MIR -176 86 10 225 238 25 0 chr2 233012195 233012317 -17675537 + (TA)n Simple_repeat Simple_repeat 1 125 0 269 200 0 0 chr2 233012401 233012456 -17675398 + L1MC4 LINE L1 6648 6702 -1340 309 230 0 0 chr2 233012457 233012531 -17675323 + (TA)n Simple_repeat Simple_repeat 2 75 0 2178 133 20 39 chr2 233012531 233012921 -17674933 + Tigger2a DNA MER2_type 4 386 -48 2290 70 0 0 chr2 233014275 233014619 -17673235 + AluY SINE Alu 1 344 0 371 310 76 29 chr2 233015024 233015195 -17672659 - MIR SINE MIR -44 218 40 286 316 26 52 chr2 233015454 233015546 -17672308 - L2 LINE L2 0 3313 3220 2309 138 11 8 chr2 233015546 233015909 -17671945 - THE1B LTR MaLR 0 364 1 286 316 26 52 chr2 233015909 233016009 -17671845 - L2 LINE L2 -93 3220 3126 519 268 8 0 chr2 233016237 233016360 -17671494 + L2 LINE L2 3187 3310 -3 432 296 66 66 chr2 233016472 233016729 -17671125 + LTR33A LTR ERVL 1 257 -266 710 250 131 48 chr2 233018400 233018989 -17668865 - L1MC5 LINE L1 -64 7897 7260 1041 259 19 107 chr2 233019121 233019205 -17668649 - L1MC4 LINE L1 -752 7209 7119 2125 75 0 0 chr2 233019205 233019459 -17668395 - AluY SINE Alu -18 293 40 1041 259 19 107 chr2 233019459 233020148 -17667706 - L1MC4 LINE L1 -842 7119 6499 266 239 62 69 chr2 233020679 233020809 -17667045 + LTR16A1 LTR ERVL 325 453 -4 2145 108 15 9 chr2 233021012 233021346 -17666508 - L1MA5A LINE L1 -1 6296 5961 2441 110 13 3 chr2 233021346 233021720 -17666134 + L1MA5A LINE L1 5650 6027 -270 23 0 0 0 chr2 233021789 233021812 -17666042 + AT_rich Low_complexity Low_complexity 1 23 0 1987 129 0 33 chr2 233021901 233022204 -17665650 - AluSx SINE Alu -19 293 1 750 28 9 19 chr2 233022488 233022595 -17665259 + (TCTA)n Simple_repeat Simple_repeat 1 106 0 1996 111 10 20 chr2 233023000 233023297 -17664557 - AluSg SINE Alu -15 295 2 369 270 20 0 chr2 233023772 233023872 -17663982 - MIR SINE MIR -16 246 145 596 195 130 19 chr2 233023872 233024026 -17663828 - L1ME1 LINE L1 -318 5848 5678 2058 236 198 53 chr2 233024336 233025355 -17662499 - L1ME LINE L1 -448 6513 5643 1915 99 0 4 chr2 233025355 233025607 -17662247 + AluSc SINE Alu 1 251 -58 2058 236 198 53 chr2 233025607 233026477 -17661377 - L1ME LINE L1 -1318 5643 4352 621 279 100 16 chr2 233026502 233027113 -17660741 - L1MCc LINE L1 -4914 1509 1244 682 318 87 3 chr2 233027116 233027405 -17660449 - L1MCc LINE L1 -5216 1207 895 469 272 13 62 chr2 233027548 233027772 -17660082 - L1MCc LINE L1 -6178 245 33 227 217 33 0 chr2 233027914 233027974 -17659880 + HAL1 LINE L1 2340 2401 -106 29 0 0 0 chr2 233028099 233028128 -17659726 + AT_rich Low_complexity Low_complexity 1 29 0 210 167 0 0 chr2 233028240 233028276 -17659578 + A-rich Low_complexity Low_complexity 1 36 0 370 0 0 0 chr2 233028426 233028470 -17659384 - L1PA6 LINE L1 -378 5777 5734 2813 52 0 0 chr2 233028470 233028819 -17659035 + L1PA6 LINE L1 5800 6148 -6 2300 95 7 0 chr2 233028879 233029183 -17658671 - AluSp SINE Alu -7 306 1 312 358 15 30 chr2 233029192 233029326 -17658528 - MIR3 SINE MIR -64 144 13 485 272 0 0 chr2 233029952 233030066 -17657788 - MER81 DNA DNA 0 114 1 2215 158 44 37 chr2 233030175 233030606 -17657248 + Tigger2a DNA MER2_type 1 434 0 1492 181 69 4 chr2 233031105 233031381 -17656473 + AluJb SINE Alu 1 294 -18 22 56 0 0 chr2 233032849 233032885 -17654969 + AT_rich Low_complexity Low_complexity 1 36 0 431 313 62 14 chr2 233032958 233033313 -17654541 - L1ME4a LINE L1 -153 5968 5597 378 0 0 0 chr2 233033324 233033366 -17654488 + (TG)n Simple_repeat Simple_repeat 1 42 0 491 262 158 42 chr2 233033378 233033714 -17654140 + MLT1L LTR MaLR 155 529 -86 1862 155 63 67 chr2 233033768 233034199 -17653655 + Charlie1b DNA MER1_type 35 466 -2295 2528 68 0 0 chr2 233034199 233034510 -17653344 + AluY SINE Alu 1 311 0 1862 155 63 67 chr2 233034510 233034534 -17653320 + Charlie1b DNA MER1_type 466 489 -2272 1991 154 58 0 chr2 233034534 233034879 -17652975 - MLT1A1 LTR MaLR 0 365 1 1862 155 63 67 chr2 233034879 233034913 -17652941 + Charlie1b DNA MER1_type 489 523 0 2458 90 0 0 chr2 233037300 233037611 -17650243 + AluY SINE Alu 1 311 0 2790 138 11 4 chr2 233037667 233038129 -17649725 - L1MA3 LINE L1 -106 6199 5735 429 20 0 0 chr2 233040539 233040589 -17647265 + (TG)n Simple_repeat Simple_repeat 1 50 0 182 303 115 16 chr2 233041699 233041821 -17646033 + L2 LINE L2 2389 2522 -792 1207 296 57 19 chr2 233041843 233042268 -17645586 + LTR16C LTR ERVL 46 486 -5 648 171 209 0 chr2 233042806 233042935 -17644919 - MER1B DNA MER1_type -141 156 1 317 221 0 0 chr2 233044271 233044339 -17643515 + MIR SINE MIR 149 216 -46 2132 75 0 4 chr2 233044390 233044655 -17643199 + AluY SINE Alu 1 264 -47 288 91 0 0 chr2 233044655 233044699 -17643155 + (TA)n Simple_repeat Simple_repeat 1 44 0 312 266 0 43 chr2 233044706 233044800 -17643054 - L1MC4 LINE L1 -1339 6703 6614 * 330 262 0 12 chr2 233044748 233044832 -17643022 + L1MC4 LINE L1 6614 6696 -1346 551 171 29 17 chr2 233045434 233045609 -17642245 + CT-rich Low_complexity Low_complexity 3 179 0 381 205 19 31 chr2 233045650 233045811 -17642043 + CT-rich Low_complexity Low_complexity 4 162 0 271 244 228 24 chr2 233046824 233046951 -17640903 - L2 LINE L2 -3 3269 3117 2258 112 6 6 chr2 233048257 233048569 -17639285 - AluSx SINE Alu 0 312 1 6243 94 16 26 chr2 233048579 233050010 -17637844 - L1PA8A LINE L1 0 6131 4711 13264 109 6 5 chr2 233050013 233052013 -17635841 + L1PA8A LINE L1 2737 4737 -1409 228 228 0 0 chr2 233053165 233053222 -17634632 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 23 0 0 0 chr2 233053264 233053287 -17634567 + AT_rich Low_complexity Low_complexity 1 23 0 213 132 59 29 chr2 233053317 233053385 -17634469 + (TA)n Simple_repeat Simple_repeat 2 71 0 575 218 59 57 chr2 233053767 233054027 -17633827 - LTR53 LTR ERVL -12 507 194 1211 256 68 25 chr2 233054515 233054957 -17632897 - MLT1C LTR MaLR -4 463 3 2689 112 3 0 chr2 233056045 233056419 -17631435 - THE1C LTR MaLR 0 375 1 441 340 19 33 chr2 233056808 233056924 -17630930 + MIR SINE MIR 29 142 -120 825 115 71 39 chr2 233056924 233057106 -17630748 + MER53 DNA DNA 2 189 0 441 340 19 33 chr2 233057106 233057204 -17630650 + MIR SINE MIR 142 240 -22 7502 25 2 2 chr2 233057489 233058447 -17629407 + L1PA4 LINE L1 5190 6147 -8 445 264 7 14 chr2 233059830 233059970 -17627884 - Zaphod DNA AcHobo -6 4025 3887 2939 115 30 90 chr2 233059984 233060516 -17627338 - LTR3b LTR ERVK 0 500 1 406 219 52 0 chr2 233060531 233060627 -17627227 - Zaphod DNA AcHobo -174 3857 3757 552 324 36 52 chr2 233060631 233060886 -17626968 - LTR16B LTR ERVL -8 456 206 3770 98 0 4 chr2 233060886 233061399 -17626455 - MER9 LTR ERVK 0 511 1 552 324 36 52 chr2 233061399 233061473 -17626381 - LTR16B LTR ERVL -258 206 132 424 286 0 0 chr2 233062334 233062460 -17625394 + L1MC/D LINE L1 5318 5443 -890 1769 309 20 25 chr2 233062470 233063069 -17624785 + L1M3e LINE L1 466 1061 -6428 1410 206 15 23 chr2 233063059 233063411 -17624443 + L1M3e LINE L1 2252 2609 -4887 * 302 286 0 12 chr2 233063886 233063970 -17623884 + L1MC4 LINE L1 6614 6696 -1346 1756 166 34 10 chr2 233064088 233064384 -17623470 - AluSx SINE Alu -7 305 3 858 311 143 2 chr2 233065496 233065895 -17621959 + LTR16B LTR ERVL 3 457 -7 219 114 0 0 chr2 233066239 233066274 -17621580 + (CA)n Simple_repeat Simple_repeat 1 35 0 317 233 55 0 chr2 233066418 233066491 -17621363 + MIR SINE MIR 109 185 -77 186 118 0 0 chr2 233066538 233066572 -17621282 + (TTA)n Simple_repeat Simple_repeat 2 35 0 2044 154 89 5 chr2 233067220 233067615 -17620239 - MSTA LTR MaLR 0 428 1 23 0 0 0 chr2 233068217 233068240 -17619614 + AT_rich Low_complexity Low_complexity 1 23 0 39 0 0 0 chr2 233069083 233069122 -17618732 + AT_rich Low_complexity Low_complexity 1 39 0 2439 87 0 0 chr2 233069428 233069737 -17618117 - AluSg SINE Alu -1 309 1 359 331 88 6 chr2 233069868 233070028 -17617826 + MIR3 SINE MIR 12 184 -24 1323 225 60 3 chr2 233070475 233070640 -17617214 - AluJo SINE Alu -12 300 111 233 56 0 28 chr2 233070640 233070676 -17617178 + (TA)n Simple_repeat Simple_repeat 2 36 0 1323 225 60 3 chr2 233070676 233070794 -17617060 - AluJo SINE Alu -201 111 1 227 194 75 15 chr2 233072696 233072763 -17615091 + L1PA15-16 LINE L1 2560 2630 -4219 3417 84 2 0 chr2 233072819 233073282 -17614572 - L1PA8A LINE L1 -414 5717 5254 2928 75 2 19 chr2 233073293 233073707 -17614147 + L1PA8 LINE L1 5764 6170 -2 1766 95 0 58 chr2 233073710 233074039 -17613815 + L1PA10 LINE L1 5891 6203 0 949 256 18 30 chr2 233074039 233074220 -17613634 + L1M3e LINE L1 2920 3097 -4468 3351 107 8 19 chr2 233074220 233074735 -17613119 - MER75 DNA T2_type -2 512 4 949 256 18 30 chr2 233074735 233074889 -17612965 + L1M3e LINE L1 3097 3251 -4314 411 180 18 18 chr2 233074901 233075012 -17612842 + L1M3e LINE L1 3356 3466 -4099 1642 123 0 33 chr2 233075119 233075395 -17612459 + AluY SINE Alu 38 304 -7 2550 51 0 13 chr2 233076060 233076373 -17611481 - AluY SINE Alu 0 311 3 330 354 9 0 chr2 233076858 233076971 -17610883 + L2 LINE L2 3155 3268 -4 3290 221 42 22 chr2 233077104 233078740 -17609114 - L1MC3 LINE L1 -743 5403 4377 1811 153 7 20 chr2 233078740 233079034 -17608820 - AluJb SINE Alu -22 290 1 3290 221 42 22 chr2 233079034 233079139 -17608715 - L1MC3 LINE L1 -1769 4377 4276 251 265 72 0 chr2 233079366 233079449 -17608405 + MIR SINE MIR 118 206 -56 2381 190 29 33 chr2 233079450 233079966 -17607888 + MLT2B2 LTR ERVL 2 515 0 22 0 0 0 chr2 233080184 233080206 -17607648 + AT_rich Low_complexity Low_complexity 1 22 0 1825 153 26 34 chr2 233080338 233080690 -17607164 - THE1B LTR MaLR 0 364 16 2146 112 0 3 chr2 233082399 233082686 -17605168 - AluSp SINE Alu -27 286 1 180 0 0 0 chr2 233083342 233083362 -17604492 + (CTG)n Simple_repeat Simple_repeat 1 20 0 949 283 55 33 chr2 233084607 233084988 -17602866 - ERVL LTR ERVL -1922 3074 2808 408 331 79 20 chr2 233084987 233085292 -17602562 - ERVL LTR ERVL -3859 1905 1583 * 11785 187 42 11 chr2 233085595 233087564 -17600290 + L1M3e LINE L1 3809 5878 -1687 2297 119 0 0 chr2 233087564 233087874 -17599980 + AluSx SINE Alu 2 311 -1 11785 187 42 11 chr2 233087874 233088475 -17599379 + L1M3e LINE L1 5878 6459 -1106 931 214 0 52 chr2 233088461 233088713 -17599141 - L1M4 LINE L1 -1051 5095 4857 * 2143 273 82 18 chr2 233088728 233089489 -17598365 + L2 LINE L2 1862 2670 -644 747 243 90 60 chr2 233089635 233089969 -17597885 + MLT1H LTR MaLR 206 549 0 1044 287 98 19 chr2 233089969 233090556 -17597298 + L2 LINE L2 2674 3313 0 291 113 0 0 chr2 233090663 233090716 -17597138 + (TG)n Simple_repeat Simple_repeat 2 54 0 234 91 0 0 chr2 233091504 233091537 -17596317 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 251 390 41 8 chr2 233091539 233091662 -17596192 - L2 LINE L2 -12 3260 3134 21 36 0 0 chr2 233092828 233092856 -17594998 + AT_rich Low_complexity Low_complexity 1 28 0 389 149 0 0 chr2 233093541 233093608 -17594246 - MLT1K LTR MaLR 0 588 522 282 103 59 0 chr2 233093609 233093677 -17594177 + A-rich Low_complexity Low_complexity 4 75 0 1191 81 12 0 chr2 233093756 233093916 -17593938 + AluY SINE Alu 1 162 -149 750 297 27 36 chr2 233144621 233144954 -17542900 + LTR16B LTR ERVL 135 464 0 310 283 94 0 chr2 233145920 233146058 -17541796 + MIR SINE MIR 57 207 -55 2612 98 154 139 chr2 233146071 233146806 -17541048 - pTR5 LTR ERV1 0 2438 1693 1076 226 62 50 chr2 233147846 233148266 -17539588 + Charlie4a DNA MER1_type 3 427 -81 283 279 32 101 chr2 233148327 233148485 -17539369 + MER96 DNA MER1_type? 29 175 0 1258 284 72 2 chr2 233148947 233149366 -17538488 + MLT1E2 LTR MaLR 168 615 -11 277 315 107 5 chr2 233149793 233149990 -17537864 - ERVL LTR ERVL -3919 1845 1629 398 376 24 26 chr2 233150207 233150633 -17537221 - ERVL LTR ERVL -4248 1516 1092 391 343 81 17 chr2 233150957 233151301 -17536553 - ERVL LTR ERVL -5061 703 338 776 283 60 37 chr2 233151573 233151926 -17535928 + LTR16C LTR ERVL 122 482 -9 3428 82 9 0 chr2 233152021 233152470 -17535384 + MLT2A2 LTR ERVL 1 453 0 241 391 94 13 chr2 233152981 233153280 -17534574 - L2 LINE L2 -505 2809 2487 1956 165 34 24 chr2 233153531 233154029 -17533825 - pTR5 LTR ERV1 -1193 1245 743 361 290 172 12 chr2 233154430 233154599 -17533255 + L3 LINE CR1 1219 1414 -163 184 287 97 72 chr2 233154931 233155168 -17532686 - L2 LINE L2 -48 3265 3023 365 86 17 0 chr2 233155209 233155267 -17532587 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 1632 234 68 62 chr2 233155636 233155796 -17532058 - L1MC4 LINE L1 -149 7893 7735 1918 132 45 0 chr2 233155796 233156083 -17531771 + AluSx SINE Alu 1 300 -12 1632 234 68 62 chr2 233156083 233156632 -17531222 - L1MC4 LINE L1 -307 7735 7180 195 369 0 0 chr2 233157092 233157157 -17530697 - MIR SINE MIR 0 262 198 3702 92 0 0 chr2 233157375 233157875 -17529979 - L1PA7 LINE L1 -7 6147 5648 495 265 43 31 chr2 233158542 233158704 -17529150 - MIR SINE MIR -55 207 44 234 0 0 0 chr2 233158739 233158765 -17529089 + (TG)n Simple_repeat Simple_repeat 2 27 0 235 283 17 0 chr2 233158882 233158942 -17528912 + CT-rich Low_complexity Low_complexity 3 63 0 239 329 168 0 chr2 233159001 233159138 -17528716 + MIR SINE MIR 12 171 -91 1120 165 14 170 chr2 233161489 233161877 -17525977 - MLT1A1 LTR MaLR -1 364 48 2058 135 23 0 chr2 233161877 233162181 -17525673 - AluSx SINE Alu -1 311 1 1120 165 14 170 chr2 233162181 233162222 -17525632 - MLT1A1 LTR MaLR -317 48 2 180 322 67 22 chr2 233164097 233164187 -17523667 + L2 LINE L2 2695 2788 -526 2344 160 5 0 chr2 233164281 233164680 -17523174 - Tigger3(Golem) DNA MER2_type -17 3012 2612 406 211 0 0 chr2 233164667 233164743 -17523111 - Tigger3(Golem) DNA MER2_type -2952 77 2 * 414 237 155 107 chr2 233164746 233165159 -17522695 + MLT1H LTR MaLR 74 506 -49 965 172 32 39 chr2 233165379 233165658 -17522196 - MER33 DNA MER1_type 0 324 48 553 123 0 0 chr2 233165704 233165785 -17522069 + FLAM_C SINE Alu 24 104 -39 225 0 0 0 chr2 233165792 233165817 -17522037 + (TC)n Simple_repeat Simple_repeat 2 26 0 640 58 74 0 chr2 233165818 233166025 -17521829 + (TA)n Simple_repeat Simple_repeat 1 222 0 5959 163 35 8 chr2 233166209 233167391 -17520463 - Tigger3b DNA MER2_type -14 1217 4 551 273 14 7 chr2 233168745 233168884 -17518970 + MER5A DNA MER1_type 47 186 -3 210 360 40 0 chr2 233171303 233171378 -17516476 + MIR SINE MIR 17 94 -114 585 286 77 32 chr2 233171393 233171732 -17516122 + MLT1H1 LTR MaLR 14 367 -188 299 355 8 24 chr2 233171900 233172024 -17515830 + MIR SINE MIR 87 208 -54 232 343 0 29 chr2 233172334 233172436 -17515418 + L1MCc LINE L1 399 497 -5926 586 291 98 71 chr2 233172520 233173150 -17514704 + L1MCc LINE L1 656 1302 -5121 1173 235 106 26 chr2 233173174 233173591 -17514263 + L1ME LINE L1 5318 5767 -399 1063 102 30 18 chr2 233173616 233173783 -17514071 + THE1B LTR MaLR 1 169 -195 1439 205 51 8 chr2 233174651 233175021 -17512833 - L1MD3 LINE L1 -883 7112 6727 408 213 0 0 chr2 233175014 233175108 -17512746 - L1MEc LINE L1 -4647 1749 1656 * 719 276 65 74 chr2 233175109 233175555 -17512299 - L1MEc LINE L1 -5915 481 40 23 0 0 0 chr2 233176242 233176265 -17511589 + AT_rich Low_complexity Low_complexity 1 23 0 1407 203 60 29 chr2 233176350 233176700 -17511154 + MLT1A1 LTR MaLR 5 365 0 1648 159 37 11 chr2 233176960 233177230 -17510624 + AluSx SINE Alu 1 277 -35 188 323 40 40 chr2 233177293 233177392 -17510462 - MIR SINE MIR -118 144 46 745 254 77 30 chr2 233177453 233177815 -17510039 + LTR16A LTR ERVL 62 440 -10 1677 288 85 21 chr2 233177825 233178668 -17509186 + HERV16 LTR ERVL 3 899 -4097 319 278 53 37 chr2 233178685 233178872 -17508982 - LTR16A LTR ERVL -199 251 62 188 323 40 40 chr2 233178933 233179032 -17508822 + MIR SINE MIR 46 144 -118 309 167 152 0 chr2 233179095 233179161 -17508693 - AluY SINE Alu -25 276 201 1413 333 42 3 chr2 233179191 233179806 -17508048 + HERV16 LTR ERVL 937 1575 -3421 416 348 29 14 chr2 233179875 233180085 -17507769 + HERVL LTR ERVL 4184 4396 -1258 480 72 87 0 chr2 233180813 233180951 -17506903 + (TA)n Simple_repeat Simple_repeat 1 150 0 24 0 0 0 chr2 233180965 233180989 -17506865 + AT_rich Low_complexity Low_complexity 1 24 0 398 288 38 0 chr2 233181120 233181252 -17506602 + MLT1J2 LTR MaLR 74 210 -240 360 0 0 0 chr2 233182222 233182262 -17505592 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 274 390 7 0 chr2 233182946 233183087 -17504767 + L2 LINE L2 2507 2648 -666 1196 196 128 22 chr2 233183091 233183403 -17504451 - MER2 DNA MER2_type 0 345 1 188 383 67 8 chr2 233183408 233183528 -17504326 + L2 LINE L2 2657 2783 -531 258 194 0 0 chr2 233184288 233184360 -17503494 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 1237 264 18 13 chr2 233184851 233185302 -17502552 + L1M4 LINE L1 4803 5255 -891 * 1654 199 11 3 chr2 233185292 233185722 -17502132 + L1MC/D LINE L1 5175 5609 -750 442 284 83 30 chr2 233186703 233186872 -17500982 - MER5B DNA MER1_type 0 178 1 311 123 35 0 chr2 233188567 233188624 -17499230 + CT-rich Low_complexity Low_complexity 4 62 0 2256 98 23 0 chr2 233188632 233188938 -17498916 - AluSq SINE Alu 0 313 1 276 111 0 0 chr2 233189669 233189714 -17498140 + (TC)n Simple_repeat Simple_repeat 1 45 0 1422 169 89 96 chr2 233192284 233192723 -17495131 - L1ME2 LINE L1 -2 6162 5727 984 234 26 37 chr2 233192742 233193072 -17494782 - L1ME2 LINE L1 -599 5565 5240 572 200 7 30 chr2 233193377 233193512 -17494342 + L1MA10 LINE L1 6203 6334 0 408 291 121 16 chr2 233193578 233193760 -17494094 - MIR SINE MIR -50 212 12 355 215 37 37 chr2 233194154 233194261 -17493593 + MLT1E3 LTR MaLR 516 622 -2 2550 129 16 28 chr2 233194453 233194886 -17492968 - MSTA LTR MaLR 0 428 1 16664 162 37 29 chr2 233194933 233198095 -17489759 + L1M1 LINE L1 22 3207 -4358 360 180 295 8 chr2 233198201 233198323 -17489531 - L1MC4a LINE L1 -967 6841 6685 217 313 89 84 chr2 233198334 233198548 -17489306 - L2 LINE L2 -649 2665 2451 32 67 0 0 chr2 233199181 233199241 -17488613 + AT_rich Low_complexity Low_complexity 1 60 0 463 324 67 25 chr2 233199749 233199987 -17487867 + MIR SINE MIR 15 262 0 504 323 58 18 chr2 233199992 233200218 -17487636 - MIR SINE MIR 0 262 28 452 228 32 10 chr2 233200537 233200660 -17487194 + MLT1E1 LTR MaLR 459 637 -8 528 298 46 9 chr2 233201207 233201580 -17486274 - MLT1C LTR MaLR 0 467 53 429 299 98 18 chr2 233202152 233202316 -17485538 + MLT1J2 LTR MaLR 273 449 -1 224 335 99 61 chr2 233202576 233202839 -17485015 + L2 LINE L2 2811 3083 -189 626 305 126 25 chr2 233202911 233203275 -17484579 + L2 LINE L2 2048 2448 -866 459 238 81 24 chr2 233203279 233203489 -17484365 + HAL1 LINE L1 1097 1318 -1189 228 188 109 47 chr2 233203517 233203581 -17484273 - MLT1J LTR MaLR -308 203 136 395 351 53 64 chr2 233203946 233204544 -17483310 + L2 LINE L2 2696 3296 -17 188 409 49 0 chr2 233204719 233204861 -17482993 - L2 LINE L2 -249 3023 2875 309 315 16 24 chr2 233205420 233205547 -17482307 + MIR SINE MIR 84 209 -53 2007 118 9 59 chr2 233206078 233206401 -17481453 - AluSx SINE Alu -5 307 1 21 110 0 0 chr2 233207163 233207254 -17480600 + AT_rich Low_complexity Low_complexity 1 91 0 508 256 8 30 chr2 233207413 233207546 -17480308 - MIR SINE MIR -25 237 108 227 378 20 0 chr2 233207697 233207795 -17480059 + L2 LINE L2 3171 3270 -2 2069 119 4 0 chr2 233209513 233209790 -17478064 + AluSc SINE Alu 1 278 -31 191 36 36 0 chr2 233209793 233209821 -17478033 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 209 315 41 14 chr2 233209838 233209911 -17477943 - L2 LINE L2 -2 3270 3196 222 374 19 19 chr2 233210525 233210632 -17477222 + L2 LINE L2 3116 3222 -50 303 265 0 0 chr2 233210956 233211058 -17476796 + (TA)n Simple_repeat Simple_repeat 2 103 0 3530 124 4 0 chr2 233211620 233212153 -17475701 - L1PA15 LINE L1 -4 6161 5627 1569 213 3 7 chr2 233212378 233212678 -17475176 + AluJo SINE Alu 1 299 -13 1312 211 115 98 chr2 233212691 233212837 -17475017 + MLT1E3 LTR MaLR 1 143 -481 2220 109 0 7 chr2 233212837 233213139 -17474715 + AluSx SINE Alu 1 300 -12 180 0 0 0 chr2 233213139 233213159 -17474695 + (TA)n Simple_repeat Simple_repeat 2 21 0 1312 211 115 98 chr2 233213159 233213545 -17474309 + MLT1E3 LTR MaLR 143 548 -76 2701 52 6 0 chr2 233213545 233213888 -17473966 + L1PA4 LINE L1 5811 6155 0 1312 211 115 98 chr2 233213888 233213964 -17473890 + MLT1E3 LTR MaLR 548 621 -3 515 107 12 0 chr2 233214020 233214104 -17473750 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 890 123 0 0 chr2 233214331 233214453 -17473401 - AluSg/x SINE Alu -27 283 162 1261 162 40 130 chr2 233214901 233215302 -17472552 - MLT1A1 LTR MaLR 0 365 1 2502 43 10 0 chr2 233215341 233215643 -17472211 - AluY SINE Alu -6 305 1 268 143 54 18 chr2 233215850 233215906 -17471948 - L2 LINE L2 -8 3305 3248 523 274 91 16 chr2 233216815 233217001 -17470853 - MIR SINE MIR -37 225 26 29 0 0 0 chr2 233217084 233217113 -17470741 + AT_rich Low_complexity Low_complexity 1 29 0 300 213 133 0 chr2 233217970 233218045 -17469809 + MER94 DNA DNA 2 86 -48 2378 116 31 3 chr2 233219279 233219633 -17468221 - THE1B LTR MaLR 0 364 1 309 282 74 7 chr2 233219633 233219782 -17468072 + L1ME1 LINE L1 5622 5780 -341 306 205 36 12 chr2 233220092 233220175 -17467679 + L1ME4a LINE L1 6037 6121 0 3866 92 7 2 chr2 233220195 233220737 -17467117 - L1PA10 LINE L1 -3 6165 5621 258 254 51 0 chr2 233220952 233221011 -17466843 + L2 LINE L2 3184 3245 -27 26 82 0 0 chr2 233221252 233221313 -17466541 + AT_rich Low_complexity Low_complexity 1 61 0 1993 139 0 0 chr2 233221598 233221878 -17465976 - AluSx SINE Alu -27 285 6 26 30 0 0 chr2 233221887 233221920 -17465934 + AT_rich Low_complexity Low_complexity 1 33 0 378 354 45 25 chr2 233225724 233225967 -17461887 + MIR SINE MIR 14 261 -1 985 265 62 10 chr2 233226040 233226346 -17461508 + L1ME1 LINE L1 5842 6163 -3 14919 164 16 12 chr2 233226859 233230144 -17457710 + L1MA1 LINE L1 2376 5678 -624 2377 62 0 37 chr2 233230144 233230465 -17457389 + AluY SINE Alu 1 309 -2 14919 164 16 12 chr2 233230465 233231093 -17456761 + L1MA1 LINE L1 5678 6302 0 559 340 32 12 chr2 233231508 233231761 -17456093 + MIR SINE MIR 4 261 -1 11691 24 0 7 chr2 233231994 233234155 -17453699 - L1PA3 LINE L1 0 6155 4005 301 365 81 0 chr2 233235002 233235150 -17452704 + MIR3 SINE MIR 18 177 -31 2240 110 27 21 chr2 233235232 233235605 -17452249 - THE1C LTR MaLR 0 375 1 400 288 17 25 chr2 233236802 233236920 -17450934 + LTR16C LTR ERVL 150 266 -225 624 179 80 6 chr2 233237095 233237257 -17450597 + L1MA7 LINE L1 6112 6285 -6 1906 96 44 0 chr2 233237594 233237844 -17450010 + AluSp SINE Alu 1 261 -52 2289 124 13 26 chr2 233239605 233239985 -17447869 + THE1C LTR MaLR 1 375 0 264 200 0 0 chr2 233240036 233240096 -17447758 + (TA)n Simple_repeat Simple_repeat 2 61 0 1247 211 7 37 chr2 233240099 233240369 -17447485 - AluJo SINE Alu -35 277 16 354 61 0 0 chr2 233241124 233241173 -17446681 + (CA)n Simple_repeat Simple_repeat 2 50 0 233 303 76 38 chr2 233241961 233242093 -17445761 - L1MC/D LINE L1 -2217 5591 5455 622 319 109 4 chr2 233242227 233242493 -17445361 - LTR16C LTR ERVL -9 482 189 282 286 51 0 chr2 233242523 233242621 -17445233 - LTR16C LTR ERVL -374 117 15 811 157 0 0 chr2 233242771 233242886 -17444968 - FLAM_C SINE Alu -28 115 1 22 103 0 0 chr2 233243112 233243190 -17444664 + AT_rich Low_complexity Low_complexity 1 78 0 720 186 8 8 chr2 233244148 233244277 -17443577 - FLAM_A SINE Alu -4 129 1 1299 210 77 23 chr2 233245318 233245628 -17442226 + MLT1A1 LTR MaLR 1 327 -38 579 256 104 6 chr2 233245673 233245837 -17442017 + MER63A DNA MER1_type 1 180 -30 250 315 137 72 chr2 233247019 233247466 -17440388 + L2 LINE L2 2201 2676 -638 2040 136 10 0 chr2 233247537 233247839 -17440015 + AluSq SINE Alu 3 307 -6 253 352 67 58 chr2 233247853 233248235 -17439619 + L2 LINE L2 2815 3203 -69 2226 104 0 7 chr2 233248235 233248533 -17439321 + AluSq SINE Alu 1 296 -17 253 352 67 58 chr2 233248533 233248596 -17439258 + L2 LINE L2 3203 3264 -8 296 47 0 23 chr2 233248735 233248778 -17439076 + (GGAA)n Simple_repeat Simple_repeat 4 45 0 196 256 203 38 chr2 233250338 233250471 -17437383 - L2 LINE L2 -16 3297 3143 21 0 0 0 chr2 233250661 233250682 -17437172 + AT_rich Low_complexity Low_complexity 1 21 0 1781 151 14 0 chr2 233250684 233250962 -17436892 - AluJb SINE Alu -27 285 4 227 309 72 10 chr2 233252070 233252167 -17435687 + MIR SINE MIR 18 120 -142 3574 169 101 29 chr2 233252388 233253158 -17434696 + LTR1B LTR ERV1 1 826 0 253 303 10 30 chr2 233253160 233253259 -17434595 - MIR SINE MIR -28 234 138 1827 145 32 56 chr2 233253881 233254061 -17433793 + THE1B LTR MaLR 1 169 -195 2157 118 3 7 chr2 233254061 233254366 -17433488 + AluSc SINE Alu 1 304 -5 1827 145 32 56 chr2 233254366 233254558 -17433296 + THE1B LTR MaLR 169 364 0 1337 287 42 23 chr2 233254916 233255393 -17432461 - LTR16C LTR ERVL -1 490 5 35 71 0 0 chr2 233258328 233258398 -17429456 + AT_rich Low_complexity Low_complexity 1 70 0 701 250 136 4 chr2 233258939 233259219 -17428635 - LTR37A LTR ERV1 -26 400 84 281 263 196 40 chr2 233259314 233259538 -17428316 - MIR SINE MIR -3 259 1 24 32 0 0 chr2 233259960 233259991 -17427863 + AT_rich Low_complexity Low_complexity 1 31 0 1458 212 145 19 chr2 233260097 233261310 -17426544 + Charlie1a DNA MER1_type 1 1455 0 209 304 18 0 chr2 233261354 233261410 -17426444 - L2 LINE L2 -76 3237 3181 * 232 284 110 65 chr2 233261382 233261537 -17426317 - L2 LINE L2 -889 2425 2264 190 243 0 0 chr2 233261963 233262000 -17425854 + L2 LINE L2 1866 1902 -1412 2180 98 0 0 chr2 233262037 233262324 -17425530 - AluSg SINE Alu -14 296 10 275 308 54 23 chr2 233263051 233263181 -17424673 - MARNA DNA Mariner -392 194 61 243 88 0 0 chr2 233264374 233264408 -17423446 + (TG)n Simple_repeat Simple_repeat 2 35 0 22 35 0 0 chr2 233265187 233265216 -17422638 + AT_rich Low_complexity Low_complexity 1 29 0 296 310 43 0 chr2 233266342 233266458 -17421396 - MLT1L LTR MaLR -74 541 421 2252 233 66 23 chr2 233266611 233267490 -17420364 - L1ME1 LINE L1 -116 6050 5132 590 177 0 0 chr2 233267491 233267587 -17420267 + MLT1B LTR MaLR 295 390 0 495 211 0 86 chr2 233267587 233267739 -17420115 - L1ME1 LINE L1 -1213 4933 4795 407 133 93 0 chr2 233267753 233267828 -17420026 - MER66B LTR ERV1 0 486 405 4191 264 97 20 chr2 233267828 233269742 -17418112 - L1ME1 LINE L1 -1612 4534 2475 522 238 119 9 chr2 233269800 233270027 -17417827 - L1MB7 LINE L1 -31 6153 5902 22 0 0 0 chr2 233270108 233270130 -17417724 + AT_rich Low_complexity Low_complexity 1 22 0 307 214 126 58 chr2 233270662 233270765 -17417089 + L1MC/D LINE L1 5353 5462 -897 22 0 0 0 chr2 233271212 233271234 -17416620 + AT_rich Low_complexity Low_complexity 1 22 0 1331 231 41 6 chr2 233271235 233271703 -17416151 - L1MB7 LINE L1 -720 5446 4961 1016 136 4 8 chr2 233271705 233271941 -17415913 - L1PA16 LINE L1 -3 6163 5874 489 123 0 25 chr2 233271942 233272023 -17415831 + L1P4 LINE L1 5745 5823 -343 1005 223 102 0 chr2 233272034 233272270 -17415584 - L1MB7 LINE L1 -1221 4925 4714 752 31 0 10 chr2 233272270 233272366 -17415488 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 2136 110 0 7 chr2 233272367 233272649 -17415205 - AluSx SINE Alu -32 280 1 1005 223 102 0 chr2 233272649 233272715 -17415139 - L1MB7 LINE L1 -1431 4715 4590 2662 216 70 15 chr2 233272716 233272914 -17414940 + L1ME1 LINE L1 5448 5634 -532 2198 123 48 31 chr2 233272914 233273272 -17414582 + THE1B LTR MaLR 1 364 0 2662 216 70 15 chr2 233273272 233273749 -17414105 + L1ME1 LINE L1 5634 6160 -6 369 253 93 16 chr2 233275906 233276088 -17411766 - MER113 DNA MER1_type? -298 223 28 2049 138 35 24 chr2 233277595 233277966 -17409888 + THE1C LTR MaLR 1 375 0 549 208 42 71 chr2 233278092 233278260 -17409594 + MER5A DNA MER1_type 27 189 0 289 164 0 33 chr2 233278276 233278337 -17409517 + MER63 DNA MER1_type 793 851 -210 244 60 43 78 chr2 233278346 233278462 -17409392 + (TA)n Simple_repeat Simple_repeat 1 112 0 425 100 17 72 chr2 233278508 233278688 -17409166 + (TA)n Simple_repeat Simple_repeat 1 170 0 260 189 33 44 chr2 233279230 233279320 -17408534 + (TATAA)n Simple_repeat Simple_repeat 4 92 0 423 193 17 8 chr2 233279339 233279458 -17408396 + (TA)n Simple_repeat Simple_repeat 1 120 0 225 213 21 11 chr2 233279481 233279575 -17408279 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 350 281 22 17 chr2 233279580 233279758 -17408096 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 342 276 8 63 chr2 233279978 233280105 -17407749 + MIR SINE MIR 140 259 -3 221 160 0 20 chr2 233280343 233280393 -17407461 + GA-rich Low_complexity Low_complexity 2 50 0 2245 104 0 13 chr2 233280809 233281137 -17406717 + AluSq SINE Alu 1 313 0 1067 252 8 8 chr2 233281274 233281536 -17406318 - MLT2C1 LTR ERVL -135 262 1 10483 96 14 21 chr2 233281881 233283192 -17404662 + THE1B-int LTR MaLR 88 1389 -191 2261 125 3 0 chr2 233283192 233283496 -17404358 - AluSx SINE Alu -7 305 1 10483 96 14 21 chr2 233283496 233283681 -17404173 + THE1B-int LTR MaLR 1389 1574 -6 2257 128 8 27 chr2 233283681 233284047 -17403807 + THE1B LTR MaLR 6 364 0 1078 239 61 16 chr2 233284058 233284368 -17403486 + L1ME1 LINE L1 5838 6161 -5 3654 187 100 98 chr2 233285360 233286384 -17401470 + Charlie1a DNA MER1_type 1 1030 -1731 2127 142 0 0 chr2 233286384 233286687 -17401167 + AluSx SINE Alu 4 306 -6 3654 187 100 98 chr2 233286687 233287114 -17400740 + Charlie1a DNA MER1_type 1030 1455 0 724 105 45 30 chr2 233287735 233287890 -17399964 + AluSg/x SINE Alu 168 312 0 23 0 0 0 chr2 233291107 233291130 -17396724 + AT_rich Low_complexity Low_complexity 1 23 0 1490 213 99 58 chr2 233291184 233291668 -17396186 + MLT1D LTR MaLR 2 505 0 301 269 39 26 chr2 233291788 233291866 -17395988 + MER2 DNA MER2_type 267 345 0 2211 70 13 30 chr2 233291939 233292237 -17395617 - AluY SINE Alu -18 293 1 2066 193 42 54 chr2 233292407 233292910 -17394944 + MLT1D LTR MaLR 1 497 -8 22 0 0 0 chr2 233293011 233293033 -17394821 + AT_rich Low_complexity Low_complexity 1 22 0 1900 153 0 7 chr2 233294172 233294477 -17393377 + AluSx SINE Alu 4 306 0 2061 128 0 0 chr2 233294477 233294758 -17393096 + AluSx SINE Alu 2 282 -30 904 174 5 5 chr2 233294761 233294962 -17392892 - L1MA7 LINE L1 -10 6281 6081 26 0 0 0 chr2 233295131 233295157 -17392697 + AT_rich Low_complexity Low_complexity 1 26 0 241 125 0 0 chr2 233296875 233296907 -17390947 - Tigger1 DNA MER2_type 0 2418 2387 2331 122 63 57 chr2 233296927 233297032 -17390822 + MSTA LTR MaLR 1 104 -324 2323 174 14 9 chr2 233297032 233297463 -17390391 - MER57B LTR ERV1 -1 433 1 2331 122 63 57 chr2 233297463 233297782 -17390072 + MSTA LTR MaLR 104 428 0 4732 166 23 10 chr2 233297782 233298603 -17389251 + MSTA-int LTR MaLR 1 832 -819 229 365 61 7 chr2 233298706 233298854 -17389000 + L2 LINE L2 3158 3313 0 284 287 0 0 chr2 233300748 233300835 -17387019 - L1MC4 LINE L1 -1342 6700 6614 1814 90 0 12 chr2 233301064 233301308 -17386546 - AluSq SINE Alu -13 300 60 393 228 43 0 chr2 233301323 233301415 -17386439 - MIR SINE MIR -156 106 11 602 221 162 7 chr2 233301446 233301600 -17386254 - MER5A DNA MER1_type -3 186 9 227 268 93 52 chr2 233301753 233301850 -17386004 + MIR3 SINE MIR 63 163 -45 315 104 0 0 chr2 233301854 233301902 -17385952 + (CAT)n Simple_repeat Simple_repeat 2 49 0 207 308 90 0 chr2 233301945 233302023 -17385831 - MIR SINE MIR -21 241 157 9567 27 0 0 chr2 233302095 233303231 -17384623 - L1PA3 LINE L1 -927 5219 4084 7747 24 0 0 chr2 233303231 233304158 -17383696 + L1PA3 LINE L1 5229 6155 0 259 330 55 0 chr2 233304292 233304401 -17383453 + MIR SINE MIR 100 214 -48 186 341 22 33 chr2 233305474 233305565 -17382289 - L2 LINE L2 -235 3037 2948 2141 87 18 0 chr2 233306025 233306351 -17381503 - AluSg SINE Alu 0 331 1 24 0 0 0 chr2 233307236 233307260 -17380594 + AT_rich Low_complexity Low_complexity 1 24 0 4899 167 32 9 chr2 233307739 233308635 -17379219 - MER49 LTR ERV1 -2 921 5 2763 122 21 2 chr2 233308695 233309114 -17378740 - MSTA LTR MaLR 0 428 2 427 248 131 7 chr2 233309297 233309450 -17378404 - MIR SINE MIR -10 252 81 454 293 78 59 chr2 233310313 233310569 -17377285 + MLT1K LTR MaLR 315 575 -13 798 199 11 11 chr2 233310819 233310995 -17376859 - MER5B DNA MER1_type 0 178 3 294 29 0 0 chr2 233311272 233311307 -17376547 + (TA)n Simple_repeat Simple_repeat 2 36 0 4749 38 9 2 chr2 233311308 233311892 -17375962 - L1PA5 LINE L1 -11 6143 5556 29 28 0 0 chr2 233312438 233312474 -17375380 + AT_rich Low_complexity Low_complexity 1 36 0 329 128 73 43 chr2 233312474 233312638 -17375216 + (TATAG)n Simple_repeat Simple_repeat 2 170 0 2127 94 0 17 chr2 233313664 233313962 -17373892 - AluY SINE Alu -18 293 1 221 188 21 0 chr2 233314002 233314050 -17373804 + (TTCA)n Simple_repeat Simple_repeat 2 50 0 21 89 0 0 chr2 233314866 233314922 -17372932 + AT_rich Low_complexity Low_complexity 1 56 0 315 183 0 0 chr2 233315928 233315988 -17371866 + Charlie5 DNA MER1_type 35 94 -2518 261 250 0 0 chr2 233315987 233316043 -17371811 - MER3 DNA MER1_type -153 56 1 * 1194 190 83 125 chr2 233316399 233316773 -17371081 + MLT2B1 LTR ERVL 1 356 -58 221 57 29 0 chr2 233316773 233316808 -17371046 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 1194 190 83 125 chr2 233316808 233316865 -17370989 + MLT2B1 LTR ERVL 356 414 0 5598 227 69 40 chr2 233316866 233318348 -17369506 + ERVL-B1 LTR ERVL 2 1526 -4238 464 323 48 24 chr2 233319274 233319565 -17368289 + L1MC4a LINE L1 5631 5928 -1880 210 98 0 49 chr2 233320337 233320378 -17367476 + (GAAAA)n Simple_repeat Simple_repeat 5 43 0 1166 241 31 57 chr2 233321411 233321835 -17366019 - L1MC4 LINE L1 -17 8025 7613 1369 218 55 6 chr2 233321940 233322266 -17365588 - L1MC4 LINE L1 -410 7632 7291 349 301 62 7 chr2 233322267 233322413 -17365441 - L1M4 LINE L1 -3863 2283 2130 231 173 0 0 chr2 233322593 233322645 -17365209 + (TG)n Simple_repeat Simple_repeat 1 52 0 2163 264 41 41 chr2 233323309 233324139 -17363715 - L1ME2 LINE L1 -1 6097 5268 294 29 0 0 chr2 233324141 233324176 -17363678 + (TG)n Simple_repeat Simple_repeat 2 36 0 1987 175 11 8 chr2 233324182 233324560 -17363294 - L1PB3 LINE L1 -2 6152 5774 252 0 0 0 chr2 233324568 233324596 -17363258 + (T)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr2 233325549 233325574 -17362280 + AT_rich Low_complexity Low_complexity 1 25 0 216 0 0 0 chr2 233325610 233325634 -17362220 + (T)n Simple_repeat Simple_repeat 1 24 0 957 75 0 15 chr2 233325634 233325768 -17362086 - AluY SINE Alu -179 132 1 2055 109 3 16 chr2 233325769 233326082 -17361772 - L1PB3 LINE L1 -369 5782 5474 574 281 73 15 chr2 233326075 233326402 -17361452 - L1ME2 LINE L1 -824 5256 4911 * 5465 223 59 48 chr2 233326388 233326595 -17361259 - L1ME2 LINE L1 -1671 4409 4206 387 41 0 0 chr2 233326595 233326644 -17361210 + (TG)n Simple_repeat Simple_repeat 2 50 0 5465 223 59 48 chr2 233326644 233326847 -17361007 - L1ME2 LINE L1 -1874 4206 4007 2061 136 125 16 chr2 233326847 233327230 -17360624 + MSTA LTR MaLR 1 425 -3 5465 223 59 48 chr2 233327230 233328724 -17359130 - L1ME2 LINE L1 -2073 4007 2482 691 269 120 55 chr2 233328737 233329662 -17358192 - L1ME2 LINE L1 -4631 1449 443 307 272 136 19 chr2 233330088 233330191 -17357663 + L2 LINE L2 3197 3311 -2 325 373 128 19 chr2 233332170 233332703 -17355151 - L2 LINE L2 -653 2661 2071 2331 88 0 0 chr2 233332855 233333160 -17354694 + AluSc SINE Alu 3 307 -2 180 0 0 0 chr2 233333633 233333653 -17354201 + (TA)n Simple_repeat Simple_repeat 1 20 0 1410 103 0 0 chr2 233333825 233334020 -17353834 + AluSc SINE Alu 115 309 0 459 271 93 7 chr2 233334660 233334811 -17353043 - L1MB8 LINE L1 -16 6162 5999 258 311 6 104 chr2 233336570 233336734 -17351120 + L2 LINE L2 3162 3309 -4 410 351 90 39 chr2 233337942 233338355 -17349499 + L2 LINE L2 2827 3260 -12 272 327 45 51 chr2 233339637 233339793 -17348061 + L2 LINE L2 3159 3313 0 1954 130 3 0 chr2 233339821 233340105 -17347749 - AluSx SINE Alu -27 285 1 1550 195 3 11 chr2 233340253 233340540 -17347314 - AluJo SINE Alu -16 296 12 26 50 0 0 chr2 233340583 233340623 -17347231 + AT_rich Low_complexity Low_complexity 1 40 0 239 254 56 42 chr2 233341085 233341156 -17346698 - L2 LINE L2 0 3313 3242 295 278 200 0 chr2 233342274 233342389 -17345465 - MIR SINE MIR -121 141 4 211 348 92 43 chr2 233343068 233343232 -17344622 - L2 LINE L2 -5 3267 3096 387 313 16 8 chr2 233343924 233344052 -17343802 - MIR3 SINE MIR -28 180 52 2165 118 0 13 chr2 233344554 233344860 -17342994 + AluSx SINE Alu 1 302 -10 689 231 0 0 chr2 233345061 233345195 -17342659 + AluJo SINE Alu 1 134 -178 477 343 38 29 chr2 233345226 233345541 -17342313 - L1ME4a LINE L1 -82 6039 5722 288 366 81 29 chr2 233345557 233345803 -17342051 - MIR SINE MIR -1 261 3 469 316 21 32 chr2 233346216 233346406 -17341448 - L2 LINE L2 0 3313 3126 408 123 0 14 chr2 233346590 233346663 -17341191 - L1MB2 LINE L1 -16 6155 6084 516 32 0 0 chr2 233346697 233346759 -17341095 + (TA)n Simple_repeat Simple_repeat 1 62 0 3295 132 56 77 chr2 233346768 233347460 -17340394 - L1MB3 LINE L1 -23 6160 5483 375 111 0 0 chr2 233347854 233347908 -17339946 - L1MB3 LINE L1 -759 5419 5366 631 195 104 0 chr2 233347916 233348070 -17339784 + MER58A DNA MER1_type 47 216 -8 693 289 6 22 chr2 233348115 233348295 -17339559 - MER5A DNA MER1_type -12 177 1 291 54 0 0 chr2 233348599 233348636 -17339218 + (TG)n Simple_repeat Simple_repeat 2 38 0 1774 186 42 77 chr2 233348636 233349088 -17338766 + MER67D LTR ERV1 1 436 -78 212 100 25 0 chr2 233349174 233349214 -17338640 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 356 298 105 39 chr2 233351030 233351439 -17336415 + MER113 DNA MER1_type? 59 494 -27 23 0 0 0 chr2 233353773 233353796 -17334058 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 233357498 233357521 -17330333 + AT_rich Low_complexity Low_complexity 1 23 0 188 365 77 17 chr2 233357590 233357771 -17330083 - MIR SINE MIR -51 211 20 330 292 46 8 chr2 233359466 233359596 -17328258 - MIR SINE MIR 0 262 128 22 0 0 0 chr2 233360640 233360662 -17327192 + AT_rich Low_complexity Low_complexity 1 22 0 184 362 38 9 chr2 233362003 233362108 -17325746 + MIR3 SINE MIR 83 190 -18 1509 279 117 83 chr2 233362695 233363522 -17324332 - L2 LINE L2 -710 2604 1807 194 61 0 30 chr2 233363522 233363555 -17324299 + (TTATA)n Simple_repeat Simple_repeat 2 33 0 1509 279 117 83 chr2 233363555 233363572 -17324282 - L2 LINE L2 -1507 1807 1792 1691 95 18 0 chr2 233363572 233363794 -17324060 - AluSc SINE Alu -83 226 1 1509 279 117 83 chr2 233363794 233364036 -17323818 - L2 LINE L2 -1522 1792 1480 24 0 0 0 chr2 233364659 233364683 -17323171 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr2 233364838 233364869 -17322985 + AT_rich Low_complexity Low_complexity 1 31 0 240 258 12 37 chr2 233365368 233365531 -17322323 + (CCCA)n Simple_repeat Simple_repeat 1 159 0 22 56 0 0 chr2 233366187 233366223 -17321631 + AT_rich Low_complexity Low_complexity 1 36 0 22 70 0 0 chr2 233367397 233367440 -17320414 + AT_rich Low_complexity Low_complexity 1 43 0 986 278 140 47 chr2 233368680 233369543 -17318311 - L2 LINE L2 -9 3304 2320 795 121 93 7 chr2 233369755 233369895 -17317959 - L1MB1 LINE L1 -7 6161 6010 180 125 0 0 chr2 233370540 233370572 -17317282 + (TTA)n Simple_repeat Simple_repeat 1 32 0 27 0 0 0 chr2 233371248 233371275 -17316579 + AT_rich Low_complexity Low_complexity 1 27 0 1141 160 5 0 chr2 233371439 233371626 -17316228 - AluJb SINE Alu -2 310 123 1581 181 44 10 chr2 233371749 233372042 -17315812 - AluJb SINE Alu -4 308 6 22 0 0 0 chr2 233372092 233372114 -17315740 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 233375289 233375313 -17312541 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr2 233375509 233375535 -17312319 + AT_rich Low_complexity Low_complexity 1 26 0 184 226 294 20 chr2 233376416 233376518 -17311336 + L2 LINE L2 3182 3311 -2 180 304 0 0 chr2 233376931 233376977 -17310877 - MIR SINE MIR -91 117 72 250 355 27 18 chr2 233377334 233377444 -17310410 + MIR SINE MIR 79 189 -73 234 188 71 35 chr2 233377562 233377647 -17310207 + L2 LINE L2 2976 3063 -209 745 211 63 47 chr2 233378435 233378625 -17309229 - MER58A DNA MER1_type -31 193 1 475 339 78 18 chr2 233378909 233379127 -17308727 - MIR SINE MIR -1 261 31 204 200 0 0 chr2 233380083 233380128 -17307726 + CT-rich Low_complexity Low_complexity 2 46 0 531 233 161 26 chr2 233380506 233380699 -17307155 - MIR SINE MIR -1 261 43 205 231 0 31 chr2 233380730 233380795 -17307059 + A-rich Low_complexity Low_complexity 2 64 0 609 169 8 0 chr2 233380816 233380934 -17306920 + L1MA8 LINE L1 6170 6288 -3 242 272 62 0 chr2 233380967 233381048 -17306806 + Charlie2 DNA MER1_type 2535 2620 -242 24 32 0 0 chr2 233381100 233381131 -17306723 + AT_rich Low_complexity Low_complexity 1 31 0 2135 77 0 80 chr2 233382152 233382488 -17305366 - AluY SINE Alu -2 309 1 316 216 13 0 chr2 233382613 233382766 -17305088 + (TA)n Simple_repeat Simple_repeat 2 156 0 742 331 59 16 chr2 233382869 233383261 -17304593 - MLT1J LTR MaLR -44 467 18 960 180 42 6 chr2 233383397 233383564 -17304290 + FAM SINE Alu 1 173 -2 30 0 0 0 chr2 233383699 233383729 -17304125 + AT_rich Low_complexity Low_complexity 1 30 0 1563 39 0 0 chr2 233383854 233384036 -17303818 + AluY SINE Alu 127 308 -3 284 306 250 7 chr2 233386018 233386162 -17301692 + MIR SINE MIR 12 190 -72 216 184 0 0 chr2 233386210 233386248 -17301606 - L2 LINE L2 -15 3298 3261 2507 165 45 2 chr2 233386413 233386861 -17300993 - MLT1C LTR MaLR 0 467 1 204 179 0 0 chr2 233386932 233386971 -17300883 + A-rich Low_complexity Low_complexity 1 39 0 204 40 0 0 chr2 233387270 233387295 -17300559 + (TA)n Simple_repeat Simple_repeat 2 26 0 389 300 50 14 chr2 233387915 233388055 -17299799 - MIR SINE MIR -112 150 6 288 158 0 0 chr2 233388158 233388215 -17299639 + CT-rich Low_complexity Low_complexity 2 58 0 509 405 21 35 chr2 233389429 233389997 -17297857 - L2 LINE L2 -2153 1161 602 339 157 0 4 chr2 233390040 233390097 -17297757 - THE1C LTR MaLR -1 425 371 1694 113 79 29 chr2 233390141 233390471 -17297383 - THE1C LTR MaLR -26 370 1 214 424 20 10 chr2 233390760 233390958 -17296896 - L2 LINE L2 -2927 387 188 392 295 84 33 chr2 233391737 233391751 -17296103 + MIR SINE MIR 61 73 -189 1721 154 73 20 chr2 233391751 233392107 -17295747 - THE1C LTR MaLR 0 375 1 392 295 84 33 chr2 233392107 233392273 -17295581 + MIR SINE MIR 73 261 -1 395 129 29 14 chr2 233392790 233392860 -17294994 - THE1B LTR MaLR 0 428 358 208 56 0 56 chr2 233392861 233392897 -17294957 + (TTTTA)n Simple_repeat Simple_repeat 4 37 0 1992 133 0 3 chr2 233393027 233393345 -17294509 - AluSx SINE Alu 0 317 1 2218 106 3 0 chr2 233393349 233393650 -17294204 - THE1B LTR MaLR -62 302 1 315 282 103 8 chr2 233393675 233393792 -17294062 + MIR SINE MIR 68 195 -67 320 118 0 0 chr2 233394038 233394089 -17293765 + Alu SINE Alu 250 300 -2 31 0 0 0 chr2 233396095 233396126 -17291728 + AT_rich Low_complexity Low_complexity 1 31 0 322 257 133 9 chr2 233396386 233396499 -17291355 + MIR SINE MIR 91 217 -45 939 146 0 0 chr2 233396507 233396644 -17291210 + AluSg/x SINE Alu 139 275 -35 351 119 0 0 chr2 233396645 233396712 -17291142 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 292 309 0 27 chr2 233396975 233397124 -17290730 + G-rich Low_complexity Low_complexity 1 145 0 207 88 0 0 chr2 233397205 233397239 -17290615 + (TA)n Simple_repeat Simple_repeat 2 35 0 216 0 0 0 chr2 233397389 233397413 -17290441 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 430 282 108 0 chr2 233397779 233397974 -17289880 - REP3 LTR ERV -58 504 289 305 339 12 29 chr2 233398033 233398204 -17289650 - REP3 LTR ERV -391 171 4 196 217 0 83 chr2 233400043 233400103 -17287751 - L2 LINE L2 -3 3310 3256 21 0 0 0 chr2 233400105 233400126 -17287728 + AT_rich Low_complexity Low_complexity 1 21 0 250 289 53 0 chr2 233400214 233400290 -17287564 + MIR SINE MIR 124 203 -59 2337 103 3 25 chr2 233400569 233400889 -17286965 - AluSq SINE Alu 0 313 1 594 280 102 25 chr2 233401462 233401698 -17286156 + MIR SINE MIR 2 255 -7 27 29 0 0 chr2 233402313 233402347 -17285507 + AT_rich Low_complexity Low_complexity 1 34 0 201 229 0 0 chr2 233402911 233402959 -17284895 + (CA)n Simple_repeat Simple_repeat 1 48 0 443 303 133 26 chr2 233403133 233403328 -17284526 + MIR SINE MIR 47 262 0 407 336 51 51 chr2 233403363 233403637 -17284217 - L3 LINE CR1 -107 1470 1197 203 265 88 15 chr2 233404340 233404408 -17283446 - MER5A DNA MER1_type -84 105 33 183 42 0 0 chr2 233404613 233404637 -17283217 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 402 203 0 0 chr2 233404806 233404949 -17282905 + G-rich Low_complexity Low_complexity 1 143 0 244 254 0 0 chr2 233404989 233405060 -17282794 + G-rich Low_complexity Low_complexity 1 71 0 1715 133 4 34 chr2 233405215 233405478 -17282376 - AluSq SINE Alu -58 255 1 1857 163 0 40 chr2 233405537 233405862 -17281992 + AluJo SINE Alu 1 312 0 354 155 84 0 chr2 233405987 233406058 -17281796 + MLT1D LTR MaLR 3 79 -426 1680 154 21 11 chr2 233406063 233406349 -17281505 + MER1B DNA MER1_type 51 339 0 934 228 96 61 chr2 233406349 233406596 -17281258 + MLT1D LTR MaLR 65 335 -170 216 0 0 0 chr2 233406596 233406620 -17281234 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 934 228 96 61 chr2 233406620 233406798 -17281056 + MLT1D LTR MaLR 335 505 0 893 123 7 0 chr2 233407935 233408081 -17279773 - LTR19A LTR ERV1 0 486 340 2607 100 68 4 chr2 233408083 233408583 -17279271 - LTR19C LTR ERV1 -187 393 1 216 240 0 0 chr2 233408590 233408640 -17279214 - L2 LINE L2 -2 3311 3262 738 149 8 0 chr2 233409715 233409836 -17278018 + AluJb SINE Alu 146 267 -45 189 250 18 18 chr2 233410355 233410411 -17277443 - L3b LINE CR1 -241 1342 1287 2015 67 3 96 chr2 233411121 233411472 -17276382 - AluY SINE Alu 0 322 1 1376 69 11 0 chr2 233412341 233412516 -17275338 + AluY SINE Alu 130 306 -5 578 335 104 15 chr2 233415312 233415841 -17272013 + MLT1K LTR MaLR 13 588 0 424 345 77 58 chr2 233415984 233416398 -17271456 - L2 LINE L2 -25 3247 2826 261 268 12 0 chr2 233416920 233417002 -17270852 + (TA)n Simple_repeat Simple_repeat 2 84 0 976 196 5 28 chr2 233417174 233417388 -17270466 + MER3 DNA MER1_type 1 209 0 247 174 0 0 chr2 233417515 233417561 -17270293 - MLT2C2 LTR ERVL -2 462 417 183 71 71 0 chr2 233417566 233417608 -17270246 + (TA)n Simple_repeat Simple_repeat 2 46 0 234 0 0 0 chr2 233418085 233418111 -17269743 + (T)n Simple_repeat Simple_repeat 1 26 0 266 161 161 0 chr2 233418135 233418197 -17269657 - L2 LINE L2 -72 3241 3170 33 25 0 0 chr2 233419770 233419810 -17268044 + AT_rich Low_complexity Low_complexity 1 40 0 227 374 53 0 chr2 233420792 233420923 -17266931 + MIR SINE MIR 125 262 0 337 311 111 26 chr2 233422219 233422409 -17265445 + MIR SINE MIR 1 206 -56 1387 230 59 12 chr2 233422420 233422864 -17264990 + MER119 DNA MER1_type 2 540 -43 602 273 116 5 chr2 233423455 233423671 -17264183 - MIR SINE MIR 0 262 23 993 313 53 29 chr2 233423695 233424245 -17263609 - MLT1K LTR MaLR -23 565 3 3010 99 16 2 chr2 233425570 233426023 -17261831 - L1MA2 LINE L1 0 6304 5846 389 101 0 19 chr2 233426024 233426107 -17261747 + L1MA2 LINE L1 5767 5844 -312 3520 119 2 15 chr2 233426111 233426641 -17261213 - MER1A DNA MER1_type -6 523 1 415 326 49 13 chr2 233426770 233426994 -17260860 + MLT1J LTR MaLR 16 247 -264 1885 142 139 13 chr2 233427634 233428014 -17259840 + MSTA LTR MaLR 1 428 0 8157 142 37 36 chr2 233428101 233429635 -17258219 + MSTA-int LTR MaLR 45 1580 0 1969 149 128 13 chr2 233429635 233430018 -17257836 + MSTA LTR MaLR 1 427 -1 23 0 0 0 chr2 233430497 233430520 -17257334 + AT_rich Low_complexity Low_complexity 1 23 0 988 150 14 52 chr2 233430806 233431019 -17256835 - MER2 DNA MER2_type -139 206 2 214 341 116 16 chr2 233431183 233431312 -17256542 + MIR3 SINE MIR 13 154 -54 287 98 39 0 chr2 233431781 233431832 -17256022 + GA-rich Low_complexity Low_complexity 3 55 0 4214 68 2 0 chr2 233432875 233433420 -17254434 + L1PA8 LINE L1 5626 6171 -1 290 294 50 50 chr2 233433490 233433570 -17254284 - L2 LINE L2 -10 3303 3224 1472 193 4 32 chr2 233433570 233433850 -17254004 + AluJo SINE Alu 38 309 -3 290 294 50 50 chr2 233433850 233433966 -17253888 - L2 LINE L2 -89 3224 3104 1862 153 0 13 chr2 233433966 233434266 -17253588 + AluJb SINE Alu 1 296 -16 290 294 50 50 chr2 233434266 233434289 -17253565 - L2 LINE L2 -208 3105 3083 469 322 79 6 chr2 233434293 233434470 -17253384 - MIR SINE MIR -44 218 29 200 400 10 10 chr2 233434493 233434593 -17253261 - L2 LINE L2 -278 3035 2936 408 244 44 0 chr2 233434975 233435065 -17252789 + MIR3 SINE MIR 81 174 -34 22 0 0 0 chr2 233435994 233436016 -17251838 + AT_rich Low_complexity Low_complexity 1 22 0 399 333 100 0 chr2 233436072 233436252 -17251602 + MIR SINE MIR 65 262 0 381 297 29 22 chr2 233436330 233436468 -17251386 - L2 LINE L2 0 3313 3175 440 326 51 10 chr2 233436594 233436790 -17251064 - L2 LINE L2 -1116 2198 1995 323 60 20 0 chr2 233436918 233436968 -17250886 - L1PA10 LINE L1 -373 5795 5745 2745 77 16 0 chr2 233436968 233437326 -17250528 + L1PA10 LINE L1 5796 6164 -4 581 288 42 38 chr2 233437335 233437575 -17250279 - MIR SINE MIR -6 256 16 21 0 0 0 chr2 233437611 233437632 -17250222 + AT_rich Low_complexity Low_complexity 1 21 0 363 320 66 25 chr2 233437848 233438045 -17249809 - L1ME LINE L1 -635 5486 5282 2085 132 0 0 chr2 233438110 233438437 -17249417 - L1PA14 LINE L1 -282 5879 5553 1602 114 76 0 chr2 233438437 233438693 -17249161 + L1PA14 LINE L1 5879 6161 0 724 175 38 99 chr2 233438870 233439012 -17248842 - MER3 DNA MER1_type -6 203 77 614 221 16 8 chr2 233439012 233439139 -17248715 - FLAM_A SINE Alu -5 128 1 724 175 38 99 chr2 233439139 233439207 -17248647 - MER3 DNA MER1_type -132 77 6 1309 182 179 3 chr2 233439279 233439429 -17248425 + MLT1A2 LTR MaLR 1 123 -251 423 0 0 0 chr2 233439429 233439476 -17248378 + (TC)n Simple_repeat Simple_repeat 1 47 0 1309 182 179 3 chr2 233439476 233439643 -17248211 + MLT1A2 LTR MaLR 123 374 0 21 0 0 0 chr2 233440047 233440068 -17247786 + AT_rich Low_complexity Low_complexity 1 21 0 741 210 6 6 chr2 233440123 233440285 -17247569 + MLT1A2 LTR MaLR 1 162 -212 309 79 32 16 chr2 233440292 233440355 -17247499 + (TC)n Simple_repeat Simple_repeat 1 64 0 842 234 10 10 chr2 233440357 233440558 -17247296 + MLT1A2 LTR MaLR 174 374 0 557 192 0 13 chr2 233442612 233442763 -17245091 + GA-rich Low_complexity Low_complexity 3 151 0 225 94 0 0 chr2 233443416 233443448 -17244406 + (GA)n Simple_repeat Simple_repeat 2 33 0 457 344 18 0 chr2 233445850 233446013 -17241841 + LTR16A LTR ERVL 232 397 -53 2278 95 0 3 chr2 233447097 233447403 -17240451 + AluSg SINE Alu 1 305 -5 3863 131 32 32 chr2 233448452 233449163 -17238691 - MER50 LTR ERV1 -23 711 1 387 271 31 23 chr2 233449506 233449635 -17238219 - L2 LINE L2 -2 3311 3182 1037 207 67 21 chr2 233449738 233450102 -17237752 + MLT1C LTR MaLR 1 390 0 4648 64 23 1 chr2 233450634 233451428 -17236426 + L1PA7 LINE L1 5098 5906 -248 1370 130 4 17 chr2 233451529 233451767 -17236087 + L1PA7 LINE L1 5917 6151 -3 204 179 0 0 chr2 233452553 233452592 -17235262 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 516 161 11 0 chr2 233452593 233452680 -17235174 - FLAM_A SINE Alu -27 115 28 322 264 137 47 chr2 233453125 233453337 -17234517 - MIR SINE MIR -10 252 22 654 299 71 0 chr2 233453455 233453679 -17234175 - MIR SINE MIR -1 261 22 23 0 0 0 chr2 233454182 233454205 -17233649 + AT_rich Low_complexity Low_complexity 1 23 0 10901 35 0 0 chr2 233454315 233456393 -17231461 - L1PA5 LINE L1 -1 6153 4076 25 0 0 0 chr2 233456557 233456582 -17231272 + AT_rich Low_complexity Low_complexity 1 25 0 2537 51 0 0 chr2 233457641 233457936 -17229918 + AluY SINE Alu 5 299 -12 1635 213 60 7 chr2 233458067 233458513 -17229341 + MER63 DNA MER1_type 591 1060 0 486 229 172 25 chr2 233458644 233458733 -17229121 - MER5A DNA MER1_type 0 189 114 2504 78 0 0 chr2 233458733 233459041 -17228813 - AluY SINE Alu -3 308 1 486 229 172 25 chr2 233459041 233459108 -17228746 - MER5A DNA MER1_type -75 114 10 21 36 0 0 chr2 233461323 233461351 -17226503 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr2 233462490 233462516 -17225338 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 233462782 233462803 -17225051 + AT_rich Low_complexity Low_complexity 1 21 0 296 252 114 41 chr2 233462987 233463110 -17224744 - L2 LINE L2 -2 3311 3180 21 36 0 0 chr2 233464377 233464405 -17223449 + AT_rich Low_complexity Low_complexity 1 28 0 426 284 22 52 chr2 233464407 233464639 -17223215 + L1MA10 LINE L1 6075 6299 -35 21 36 0 0 chr2 233465203 233465231 -17222623 + AT_rich Low_complexity Low_complexity 1 28 0 255 309 46 62 chr2 233465738 233465932 -17221922 - MIR SINE MIR -71 191 1 609 222 16 111 chr2 233466088 233466277 -17221577 + MER5A DNA MER1_type 3 173 -16 2249 109 58 11 chr2 233466325 233466673 -17221181 + THE1B LTR MaLR 1 364 0 822 216 34 34 chr2 233467104 233467308 -17220546 - MER20 DNA MER1_type 0 219 16 2226 131 0 0 chr2 233468638 233468944 -17218910 - AluSx SINE Alu -5 307 2 2027 150 3 0 chr2 233469672 233469958 -17217896 - AluSx SINE Alu -25 287 1 1968 134 16 22 chr2 233470469 233470783 -17217071 - AluSq SINE Alu -1 312 1 501 229 22 50 chr2 233471036 233471215 -17216639 + MER5B DNA MER1_type 5 178 0 21 0 0 0 chr2 233471807 233471828 -17216026 + AT_rich Low_complexity Low_complexity 1 21 0 1472 202 91 6 chr2 233473775 233474106 -17213748 - MSTB LTR MaLR -67 359 1 1744 174 7 7 chr2 233474161 233474455 -17213399 - AluJb SINE Alu -17 295 2 315 343 136 47 chr2 233474728 233474897 -17212957 + L2 LINE L2 2556 2739 -575 560 294 43 5 chr2 233474903 233475090 -17212764 + MER63A DNA MER1_type 16 209 -1 216 369 74 0 chr2 233476687 233476809 -17211045 + L2 LINE L2 3138 3268 -4 755 340 22 22 chr2 233477164 233477532 -17210322 - L2 LINE L2 -2232 1082 715 180 0 0 0 chr2 233477737 233477757 -17210097 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 2118 76 14 14 chr2 233480488 233480776 -17207078 - AluY SINE Alu -15 296 9 329 262 10 58 chr2 233480881 233480984 -17206870 + L2 LINE L2 3175 3272 0 215 316 0 13 chr2 233480993 233481084 -17206770 + GA-rich Low_complexity Low_complexity 1 153 0 202 309 131 48 chr2 233482643 233482727 -17205127 - MIR SINE MIR -60 148 58 235 279 0 16 chr2 233483002 233483063 -17204791 - L2 LINE L2 -89 3183 3124 428 360 144 8 chr2 233483185 233483435 -17204419 - L2 LINE L2 -481 2833 2550 193 295 66 0 chr2 233483571 233483632 -17204222 + L2 LINE L2 2403 2467 -847 292 233 151 23 chr2 233483657 233483743 -17204111 - L2 LINE L2 0 3313 3217 1564 170 9 43 chr2 233485309 233485633 -17202221 - MLT1A1 LTR MaLR -52 313 1 2176 126 0 0 chr2 233485896 233486190 -17201664 + AluSg SINE Alu 1 294 -16 314 289 16 16 chr2 233486877 233487005 -17200849 - MLT1K LTR MaLR -8 580 453 277 300 10 0 chr2 233487105 233487205 -17200649 - MLT1K LTR MaLR -330 258 158 236 359 138 0 chr2 233488923 233489090 -17198764 - MIR SINE MIR -15 247 58 792 299 57 46 chr2 233489627 233490086 -17197768 - LTR16B LTR ERVL 0 464 1 285 349 20 5 chr2 233490099 233490294 -17197560 - HERV16 LTR ERVL -12 4984 4787 895 187 6 18 chr2 233490573 233490744 -17197110 - FRAM SINE Alu -8 168 1 380 311 125 15 chr2 233491119 233491383 -17196471 + MLT1I LTR MaLR 98 390 -19 315 233 33 133 chr2 233491517 233491667 -17196187 - MER5A DNA MER1_type -4 185 51 264 30 0 0 chr2 233491941 233491974 -17195880 + (TG)n Simple_repeat Simple_repeat 2 34 0 423 0 0 0 chr2 233492556 233492603 -17195251 + (CA)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr2 233492602 233492622 -17195232 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 783 163 9 37 chr2 233493700 233494158 -17193696 + CT-rich Low_complexity Low_complexity 1 444 0 943 194 175 13 chr2 233495613 233495927 -17191927 - MLT1A1 LTR MaLR 0 365 1 252 171 68 35 chr2 233496620 233496694 -17191160 - L1M2 LINE L1 -530 5770 5695 207 0 0 0 chr2 233496697 233496720 -17191134 + (TG)n Simple_repeat Simple_repeat 2 24 0 210 250 0 0 chr2 233497373 233497413 -17190441 + L3b LINE CR1 1457 1496 -87 233 295 67 29 chr2 233497526 233497631 -17190223 + L3b LINE CR1 1298 1406 -177 184 245 137 49 chr2 233498735 233498837 -17189017 + MIR3 SINE MIR 87 197 -11 2786 185 88 6 chr2 233499041 233499337 -17188517 + L1MA8 LINE L1 5465 5735 -556 312 120 0 0 chr2 233499337 233499387 -17188467 + (CA)n Simple_repeat Simple_repeat 1 50 0 2786 185 88 6 chr2 233499387 233499760 -17188094 + L1MA8 LINE L1 5735 6189 -102 346 95 14 40 chr2 233499760 233499834 -17188020 + (TA)n Simple_repeat Simple_repeat 2 73 0 21 0 0 0 chr2 233499846 233499867 -17187987 + AT_rich Low_complexity Low_complexity 1 21 0 411 177 42 0 chr2 233499867 233499963 -17187891 + L1MA8 LINE L1 6191 6290 -1 1807 184 3 0 chr2 233499965 233500275 -17187579 + AluSx SINE Alu 1 311 -1 35 71 0 0 chr2 233500431 233500501 -17187353 + AT_rich Low_complexity Low_complexity 1 70 0 3864 60 4 8 chr2 233500501 233501015 -17186839 - L1PA3 LINE L1 -3 6152 5641 17222 32 0 0 chr2 233501115 233503746 -17184108 - L1PA3 LINE L1 -285 5870 3240 190 340 126 0 chr2 233504168 233504271 -17183583 - L2 LINE L2 -1 3312 3197 3149 206 38 14 chr2 233504764 233505574 -17182280 + L1PB4 LINE L1 4123 4952 -1194 2020 172 39 27 chr2 233505577 233506118 -17181736 - MLT2A2 LTR ERVL 0 554 1 4174 159 22 42 chr2 233506122 233507272 -17180582 + L1PB4 LINE L1 4955 6083 -73 228 200 22 0 chr2 233507322 233507367 -17180487 + MIR SINE MIR 109 154 -108 331 143 14 43 chr2 233507376 233507446 -17180408 + MLT1E1 LTR MaLR 1 68 -586 1514 179 22 55 chr2 233507464 233507828 -17180026 + MLT1E3 LTR MaLR 273 624 0 215 286 0 0 chr2 233507867 233507909 -17179945 + L2 LINE L2 3210 3251 -21 772 218 135 5 chr2 233508851 233509044 -17178810 - MLT1E1 LTR MaLR -7 647 430 1067 173 51 88 chr2 233509076 233509218 -17178636 - MLT1E1 LTR MaLR -306 348 202 1750 184 3 10 chr2 233509218 233509506 -17178348 - AluJo SINE Alu -26 286 1 1067 173 51 88 chr2 233509506 233509715 -17178139 - MLT1E1 LTR MaLR -452 202 10 1749 147 7 14 chr2 233510857 233511184 -17176670 - AluSx SINE Alu 0 325 1 2279 116 0 0 chr2 233511254 233511565 -17176289 - AluY SINE Alu 0 311 1 28 0 0 0 chr2 233511649 233511677 -17176177 + AT_rich Low_complexity Low_complexity 1 28 0 244 337 91 16 chr2 233512741 233512928 -17174926 + L2 LINE L2 2836 3036 -236 426 271 69 85 chr2 233514442 233514689 -17173165 - L2 LINE L2 -2 3270 3028 1849 166 0 7 chr2 233514962 233515257 -17172597 + AluJo SINE Alu 1 293 -19 584 269 92 60 chr2 233515933 233516215 -17171639 - L2 LINE L2 -9 3304 3014 1523 259 130 27 chr2 233516225 233516902 -17170952 - LTR41 LTR ERVL -6 767 21 770 331 101 12 chr2 233516942 233517347 -17170507 - L2 LINE L2 -325 2988 2551 2406 125 69 29 chr2 233518080 233518310 -17169544 - L1MA3 LINE L1 0 7724 7505 2410 77 10 10 chr2 233518310 233518621 -17169233 - AluY SINE Alu 0 311 1 2406 125 69 29 chr2 233518621 233518870 -17168984 - L1MA3 LINE L1 -219 7505 7226 2188 110 75 20 chr2 233518870 233519215 -17168639 - THE1B LTR MaLR 0 364 1 11202 89 4 12 chr2 233519215 233520302 -17167552 - THE1B-int LTR MaLR 0 1580 486 675 84 0 0 chr2 233520302 233520397 -17167457 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 6761 67 16 21 chr2 233520397 233521326 -17166528 - L1PA7 LINE L1 -8 6146 5219 11202 89 4 12 chr2 233521326 233521829 -17166025 - THE1B-int LTR MaLR -1092 488 1 2023 142 72 17 chr2 233521829 233522174 -17165680 - THE1B LTR MaLR 0 364 1 19506 163 22 29 chr2 233522174 233529441 -17158413 - L1MA3 LINE L1 -494 7230 19 1906 160 10 3 chr2 233530431 233530725 -17157129 - AluSx SINE Alu -16 296 1 453 281 139 55 chr2 233531031 233531252 -17156602 - L2 LINE L2 -938 2376 2114 2185 120 0 10 chr2 233531252 233531584 -17156270 + AluSx SINE Alu 9 312 0 453 281 139 55 chr2 233531584 233531707 -17156147 - L2 LINE L2 -1200 2114 2003 481 119 92 46 chr2 233531778 233531887 -17155967 + MER47A DNA MER2_type 45 158 -208 793 326 57 45 chr2 233531889 233532491 -17155363 - L2 LINE L2 -1318 1996 1388 324 218 128 32 chr2 233532968 233533124 -17154730 + MLT1H1 LTR MaLR 369 539 -16 2244 119 0 0 chr2 233533362 233533656 -17154198 - AluSq SINE Alu -18 295 2 307 287 156 29 chr2 233533818 233533940 -17153914 - LTR50 LTR ERVL -49 746 641 1164 230 50 39 chr2 233533940 233534228 -17153626 + MLT1A1 LTR MaLR 5 299 -66 2125 121 10 10 chr2 233534228 233534533 -17153321 - AluSg SINE Alu -5 305 1 1164 230 50 39 chr2 233534533 233534601 -17153253 + MLT1A1 LTR MaLR 299 365 0 307 287 156 29 chr2 233534601 233534722 -17153132 - LTR50 LTR ERVL -154 641 472 473 249 75 47 chr2 233534792 233535005 -17152849 - LTR50 LTR ERVL -576 219 1 1776 114 111 11 chr2 233535302 233535582 -17152272 + AluSx SINE Alu 3 310 -2 2051 150 3 13 chr2 233535860 233536166 -17151688 - AluSg SINE Alu -7 303 1 520 243 48 43 chr2 233536182 233536478 -17151376 + L1MA9 LINE L1 5959 6258 -33 417 246 66 54 chr2 233537486 233537653 -17150201 + L2 LINE L2 3094 3262 -51 487 294 144 34 chr2 233537892 233538219 -17149635 - MLT1J2 LTR MaLR -2 448 86 192 97 0 0 chr2 233538808 233538839 -17149015 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 291 333 9 18 chr2 233538840 233538954 -17148900 - L2 LINE L2 -9 3304 3192 246 81 0 0 chr2 233538959 233538996 -17148858 + (TATG)n Simple_repeat Simple_repeat 4 40 0 235 281 152 12 chr2 233539019 233539190 -17148664 - L2 LINE L2 -105 3208 3014 1300 190 59 129 chr2 233539752 233540293 -17147561 - MLT1D LTR MaLR -2 503 1 584 207 55 24 chr2 233541271 233541495 -17146359 - MER106B DNA MER1_type -7 1052 1 438 286 58 77 chr2 233541757 233542068 -17145786 - L1ME4a LINE L1 -260 5861 5557 22 0 0 0 chr2 233542364 233542386 -17145468 + AT_rich Low_complexity Low_complexity 1 22 0 1419 266 56 31 chr2 233542508 233543047 -17144807 - L2 LINE L2 0 3313 2763 326 282 65 8 chr2 233543049 233543173 -17144681 - L2 LINE L2 -3 3310 3180 520 323 77 44 chr2 233544645 233545083 -17142771 - L2 LINE L2 -43 3229 2776 2024 131 3 3 chr2 233546397 233546687 -17141167 + AluSx SINE Alu 6 295 -17 471 296 79 20 chr2 233547207 233547410 -17140444 - MIR SINE MIR -11 251 37 576 313 123 0 chr2 233547516 233547727 -17140127 + MIR SINE MIR 18 254 -8 212 83 0 28 chr2 233547728 233547764 -17140090 + (TTA)n Simple_repeat Simple_repeat 1 35 0 222 37 0 0 chr2 233548459 233548486 -17139368 + (TG)n Simple_repeat Simple_repeat 2 28 0 2022 171 0 3 chr2 233548495 233548841 -17139013 - MER7A DNA MER2_type 0 346 4 249 259 0 0 chr2 233549149 233549203 -17138651 + GA-rich Low_complexity Low_complexity 2 55 0 395 359 39 53 chr2 233550109 233550390 -17137464 - L2 LINE L2 -7 3265 2989 2243 191 41 79 chr2 233550416 233551074 -17136780 - LTR48B LTR ERV1 -11 633 1 254 277 238 55 chr2 233551133 233551335 -17136519 - MIR SINE MIR -2 260 22 2132 114 64 22 chr2 233551912 233552272 -17135582 - THE1C LTR MaLR 0 375 1 10350 107 28 21 chr2 233552272 233553841 -17134013 - THE1C-int LTR MaLR 0 1580 1 2079 120 64 19 chr2 233553841 233554200 -17133654 - THE1C LTR MaLR 0 375 1 657 241 63 81 chr2 233554722 233554793 -17133061 - MLT1H1 LTR MaLR -2 553 482 2182 129 7 0 chr2 233554793 233555096 -17132758 - AluSq SINE Alu -8 305 1 657 241 63 81 chr2 233555096 233555503 -17132351 - MLT1H1 LTR MaLR -73 482 32 337 279 38 38 chr2 233556919 233557077 -17130777 - MLT1G LTR MaLR -36 554 397 240 250 0 42 chr2 233557137 233557209 -17130645 - MLT1G LTR MaLR -306 284 216 232 152 0 0 chr2 233557237 233557284 -17130570 - MLT1H LTR MaLR -422 127 6 267 266 91 14 chr2 233557437 233557580 -17130274 + MER112 DNA MER1_type 98 251 -9 208 194 10 163 chr2 233558360 233558458 -17129396 + L3 LINE CR1 1487 1569 -8 30 0 0 0 chr2 233558991 233559021 -17128833 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 233559352 233559375 -17128479 + AT_rich Low_complexity Low_complexity 1 23 0 2011 128 7 4 chr2 233559494 233559775 -17128079 - AluSx SINE Alu -26 286 5 461 242 49 21 chr2 233560405 233560570 -17127284 - MLT1A2 LTR MaLR -19 355 189 206 250 0 0 chr2 233560573 233560617 -17127237 + (CA)n Simple_repeat Simple_repeat 1 44 0 226 50 50 0 chr2 233560620 233560660 -17127194 + (GA)n Simple_repeat Simple_repeat 2 43 0 741 159 44 66 chr2 233560660 233560842 -17127012 - MLT1A2 LTR MaLR -196 178 1 2313 93 0 7 chr2 233565303 233565613 -17122241 + AluY SINE Alu 1 308 -3 953 184 50 50 chr2 233566435 233566653 -17121201 + MER20 DNA MER1_type 2 219 0 25 31 0 0 chr2 233566748 233566780 -17121074 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr2 233568007 233568032 -17119822 + AT_rich Low_complexity Low_complexity 1 25 0 2002 141 38 30 chr2 233568393 233568763 -17119091 - THE1C LTR MaLR -2 373 1 2114 123 0 3 chr2 233569478 233569770 -17118084 - AluSx SINE Alu -21 291 1 22 56 0 0 chr2 233570091 233570127 -17117727 + AT_rich Low_complexity Low_complexity 1 36 0 1545 217 10 10 chr2 233570932 233571061 -17116793 + AluJo SINE Alu 1 129 -183 234 0 0 0 chr2 233571061 233571087 -17116767 + (TA)n Simple_repeat Simple_repeat 2 27 0 1545 217 10 10 chr2 233571087 233571257 -17116597 + AluJo SINE Alu 128 300 -12 338 328 69 17 chr2 233571943 233572117 -17115737 - MER5A DNA MER1_type -1 188 6 473 270 185 6 chr2 233573093 233573271 -17114583 - MIR SINE MIR -23 239 30 363 275 154 20 chr2 233574746 233574895 -17112959 + MIR3 SINE MIR 25 193 -15 2225 120 3 0 chr2 233575786 233576094 -17111760 + AluSx SINE Alu 1 309 -3 185 335 118 12 chr2 233577295 233577456 -17110398 + L2 LINE L2 1695 1872 -1442 967 146 0 0 chr2 233577574 233577718 -17110136 - FAM SINE Alu -19 166 23 277 333 156 35 chr2 233577875 233578016 -17109838 + L2 LINE L2 3115 3272 0 192 316 13 26 chr2 233578027 233578103 -17109751 + L2 LINE L2 3183 3257 -56 3677 108 2 28 chr2 233578698 233579261 -17108593 - L1PB1 LINE L1 -5 6146 5599 212 226 108 69 chr2 233579293 233579395 -17108459 + MIR SINE MIR 154 259 -3 234 156 0 0 chr2 233580596 233580641 -17107213 + CT-rich Low_complexity Low_complexity 1 45 0 3317 186 58 47 chr2 233581404 233581494 -17106360 - L1MB3 LINE L1 -9 6174 6086 4143 123 33 47 chr2 233581494 233582195 -17105659 - LTR8 LTR ERV1 0 691 1 3317 186 58 47 chr2 233582195 233582668 -17105186 - L1MB3 LINE L1 -97 6086 5619 2058 98 9 67 chr2 233582668 233582983 -17104871 - AluSc SINE Alu -12 297 1 3317 186 58 47 chr2 233582983 233583502 -17104352 - L1MB3 LINE L1 -564 5619 5072 1050 201 33 27 chr2 233583504 233583803 -17104051 - LTR25 LTR ERV1 -14 780 480 316 143 143 0 chr2 233583773 233583836 -17104018 - MER51A LTR ERV1 -354 280 209 * 535 108 12 0 chr2 233584006 233584089 -17103765 - MER61E LTR ERV1 -485 84 1 2112 216 71 8 chr2 233584090 233584734 -17103120 - L1MB3 LINE L1 -1073 5073 4389 378 203 0 0 chr2 233584776 233584840 -17103014 - L2 LINE L2 -1 3312 3249 638 162 0 9 chr2 233585005 233585116 -17102738 - AluSc SINE Alu -9 300 191 316 320 39 16 chr2 233585951 233586079 -17101775 - MIR3 SINE MIR -34 174 44 225 0 0 0 chr2 233587205 233587230 -17100624 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 248 259 62 37 chr2 233587515 233587596 -17100258 - MER5B DNA MER1_type -90 88 6 362 271 110 8 chr2 233587641 233587759 -17100095 - MIR3 SINE MIR -43 165 36 328 380 32 11 chr2 233588717 233588904 -17098950 - MIR3 SINE MIR -12 196 6 873 331 20 18 chr2 233590926 233591267 -17096587 - MER115 DNA AcHobo -350 343 2 362 319 44 22 chr2 233591454 233591589 -17096265 + MIR SINE MIR 32 169 -93 1250 237 67 19 chr2 233591696 233592068 -17095786 - MLT1B LTR MaLR 0 390 1 189 359 31 0 chr2 233592170 233592234 -17095620 + MIR SINE MIR 20 85 -123 294 299 17 8 chr2 233592361 233592478 -17095376 - MER103 DNA DNA -47 119 2 217 353 54 54 chr2 233592783 233593041 -17094813 + L2 LINE L2 2661 2918 -396 180 135 0 0 chr2 233593396 233593433 -17094421 + (TA)n Simple_repeat Simple_repeat 1 37 0 342 0 0 0 chr2 233593447 233593485 -17094369 + (CA)n Simple_repeat Simple_repeat 2 39 0 206 31 0 31 chr2 233593871 233593903 -17093951 + (CAAAA)n Simple_repeat Simple_repeat 4 34 0 1344 213 20 27 chr2 233594038 233594339 -17093515 - MLT1A2 LTR MaLR 0 374 76 270 192 0 82 chr2 233594392 233594465 -17093389 - MLT1A2 LTR MaLR -307 67 1 2202 187 37 67 chr2 233594532 233595103 -17092751 - MLT2B3 LTR ERVL 0 554 1 192 373 0 0 chr2 233595113 233595180 -17092674 + MIR SINE MIR 190 256 -6 224 361 72 18 chr2 233595548 233595714 -17092140 - MIR3 SINE MIR -3 205 31 23 68 0 0 chr2 233595818 233595862 -17091992 + AT_rich Low_complexity Low_complexity 1 44 0 601 302 47 5 chr2 233596568 233596780 -17091074 - MLT1J2 LTR MaLR -223 227 7 221 307 40 0 chr2 233597535 233597610 -17090244 + MIR SINE MIR 65 142 -120 273 428 26 0 chr2 233598181 233598375 -17089479 + L3 LINE CR1 1374 1572 -5 2075 127 7 7 chr2 233598699 233598998 -17088856 + AluSq SINE Alu 10 308 -5 448 299 77 31 chr2 233600654 233600848 -17087006 - MIR SINE MIR -40 222 20 198 341 0 24 chr2 233601509 233601591 -17086263 - L2 LINE L2 -2 3311 3232 726 192 0 0 chr2 233601906 233602057 -17085797 + (CA)n Simple_repeat Simple_repeat 2 152 0 2455 60 7 0 chr2 233602379 233602679 -17085175 + AluY SINE Alu 1 302 -9 1395 198 0 4 chr2 233602916 233603189 -17084665 + L1MB2 LINE L1 5890 6161 -10 945 189 64 28 chr2 233603241 233603257 -17084597 - L1MB3 LINE L1 -271 5912 5898 628 76 22 0 chr2 233603257 233603349 -17084505 - L1PA7 LINE L1 0 6154 6061 945 189 64 28 chr2 233603349 233603581 -17084273 - L1MB3 LINE L1 -285 5898 5655 1752 179 3 3 chr2 233603592 233603877 -17083977 - AluJb SINE Alu -27 285 1 720 157 52 96 chr2 233603973 233604048 -17083806 + LTR37B LTR ERV1 198 275 -193 2014 115 0 18 chr2 233604048 233604430 -17083424 - AluSx SINE Alu 0 377 1 720 157 52 96 chr2 233604430 233604581 -17083273 + LTR37B LTR ERV1 275 416 -52 395 119 7 10 chr2 233604698 233604816 -17083038 - MER89 LTR ERV1 0 559 410 573 193 9 170 chr2 233604823 233605035 -17082819 + MER57B LTR ERV1 42 248 -184 591 222 18 12 chr2 233605653 233605820 -17082034 + MER57A LTR ERV1 236 403 0 1072 266 19 0 chr2 233605828 233606095 -17081759 - MER89 LTR ERV1 -150 409 138 261 0 0 0 chr2 233606585 233606614 -17081240 + (A)n Simple_repeat Simple_repeat 1 29 0 30 0 0 0 chr2 233606839 233606869 -17080985 + AT_rich Low_complexity Low_complexity 1 30 0 454 340 152 38 chr2 233607235 233608124 -17079730 - L2 LINE L2 -470 2844 1855 22 0 0 0 chr2 233609751 233609773 -17078081 + AT_rich Low_complexity Low_complexity 1 22 0 2424 91 0 3 chr2 233609857 233610164 -17077690 - AluSq SINE Alu -7 306 1 285 328 115 0 chr2 233610359 233610481 -17077373 - L2 LINE L2 -15 3257 3122 2823 188 2 6 chr2 233610496 233611007 -17076847 - MLT2B1 LTR ERVL 0 520 12 1993 162 99 28 chr2 233611051 233611477 -17076377 - MSTB2 LTR MaLR 0 457 2 234 244 89 0 chr2 233611840 233611930 -17075924 - MLT1L LTR MaLR -94 521 424 258 278 19 56 chr2 233612106 233612214 -17075640 - MLT1L LTR MaLR -509 106 3 436 285 134 38 chr2 233612322 233612666 -17075188 - L2 LINE L2 -848 2466 2090 1700 127 0 30 chr2 233613340 233613643 -17074211 - AluSx SINE Alu 0 319 25 576 270 211 8 chr2 233615023 233615450 -17072404 - Charlie8 DNA MER1_type -2153 264 1 22 0 0 0 chr2 233616847 233616869 -17070985 + AT_rich Low_complexity Low_complexity 1 22 0 231 381 36 0 chr2 233616903 233617042 -17070812 + MIR SINE MIR 113 256 -6 256 303 56 11 chr2 233617734 233617823 -17070031 - L2 LINE L2 -226 3046 2954 242 204 19 0 chr2 233617975 233618029 -17069825 + MLT1H LTR MaLR 21 75 -474 249 28 0 0 chr2 233618045 233618081 -17069773 - L1PA3 LINE L1 -3 6152 6117 * 545 15 0 0 chr2 233618078 233618143 -17069711 + L1P2 LINE L1 5633 5697 -458 1228 246 78 0 chr2 233618143 233618489 -17069365 + MLT1H LTR MaLR 63 435 -114 359 21 21 0 chr2 233619696 233619744 -17068110 + (TG)n Simple_repeat Simple_repeat 1 49 0 258 56 0 0 chr2 233619754 233619790 -17068064 + (GA)n Simple_repeat Simple_repeat 1 36 0 288 282 33 83 chr2 233620942 233621144 -17066710 - MIR SINE MIR -55 207 21 249 182 36 18 chr2 233621197 233621252 -17066602 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 498 17 0 0 chr2 233622968 233623027 -17064827 + (CA)n Simple_repeat Simple_repeat 2 60 0 2258 102 0 20 chr2 233623078 233623383 -17064471 + AluSg SINE Alu 1 299 -11 312 392 16 8 chr2 233623524 233623649 -17064205 - L2 LINE L2 -4 3268 3143 569 306 10 16 chr2 233623874 233624067 -17063787 - MIR SINE MIR 0 262 71 855 292 32 29 chr2 233624072 233624384 -17063470 - MLT1K LTR MaLR -273 315 3 7696 16 1 0 chr2 233624992 233626488 -17061366 - L1PA3 LINE L1 -3 6152 4652 1760 163 56 0 chr2 233626525 233626813 -17061041 + AluSx SINE Alu 3 306 -6 208 236 14 28 chr2 233626947 233627091 -17060763 + CT-rich Low_complexity Low_complexity 1 141 0 2273 93 3 0 chr2 233627815 233628105 -17059749 + AluSp SINE Alu 1 291 -22 233 246 16 0 chr2 233628146 233628207 -17059647 + (TATG)n Simple_repeat Simple_repeat 1 62 0 216 231 0 0 chr2 233629490 233629542 -17058312 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 2281 107 3 0 chr2 233629543 233629843 -17058011 - AluSq SINE Alu -12 301 1 189 107 0 0 chr2 233630635 233630663 -17057191 + (TG)n Simple_repeat Simple_repeat 2 29 0 183 311 40 27 chr2 233630673 233630747 -17057107 - MIR SINE MIR -6 256 182 1413 244 44 10 chr2 233631172 233631581 -17056273 + MER76 LTR ERV 1 423 -265 469 159 111 16 chr2 233631579 233631705 -17056149 + MER76 LTR ERV 551 688 0 * 491 214 48 10 chr2 233631710 233631813 -17056041 + L2 LINE L2 3203 3309 -4 21 0 0 0 chr2 233631829 233631850 -17056004 + AT_rich Low_complexity Low_complexity 1 21 0 1232 191 42 61 chr2 233631984 233632345 -17055509 - MLT1A1 LTR MaLR -11 354 1 521 176 0 0 chr2 233632540 233632625 -17055229 - AluJ/FLAM SINE Alu -227 85 1 214 267 145 23 chr2 233632627 233632758 -17055096 + L2 LINE L2 3160 3306 -7 230 308 39 39 chr2 233633465 233633595 -17054259 + MIR SINE MIR 118 247 -15 2559 74 0 0 chr2 233636693 233637004 -17050850 + AluY SINE Alu 1 311 0 2152 115 0 3 chr2 233637356 233637676 -17050178 + AluSx SINE Alu 1 319 0 582 109 0 0 chr2 233638838 233638939 -17048915 + (CA)n Simple_repeat Simple_repeat 2 102 0 2238 108 10 7 chr2 233640055 233640361 -17047493 - AluSq SINE Alu -5 308 2 240 213 0 67 chr2 233640456 233640490 -17047364 + A-rich Low_complexity Low_complexity 5 33 -41 373 79 159 0 chr2 233640490 233640553 -17047301 + L1MC1 LINE L1 6248 6320 -13 240 213 0 67 chr2 233640553 233640593 -17047261 + A-rich Low_complexity Low_complexity 33 74 0 22 35 0 0 chr2 233641683 233641712 -17046142 + AT_rich Low_complexity Low_complexity 1 29 0 336 316 64 35 chr2 233642332 233642503 -17045351 - MIR SINE MIR -22 240 65 271 310 17 7 chr2 233642588 233642694 -17045160 + MIR SINE MIR 13 121 -87 729 229 0 7 chr2 233642931 233643084 -17044770 - MER97a DNA MER1_type? -741 153 2 409 317 53 48 chr2 233644404 233644631 -17043223 - MIR SINE MIR -14 248 21 2243 118 0 0 chr2 233644678 233644975 -17042879 - AluSx SINE Alu -15 297 1 2376 94 0 3 chr2 233646509 233646807 -17041047 - AluSc SINE Alu -12 297 1 264 325 50 25 chr2 233646854 233647014 -17040840 + L2 LINE L2 2945 3108 -164 2267 71 10 26 chr2 233647538 233647847 -17040007 + AluY SINE Alu 1 304 -7 1936 84 0 0 chr2 233648550 233648789 -17039065 + AluSg/x SINE Alu 73 311 -1 4543 125 24 62 chr2 233649379 233650189 -17037665 - MER4E LTR ERV1 0 779 1 248 417 45 15 chr2 233650219 233650351 -17037503 - L2 LINE L2 -4 3268 3133 28 29 0 0 chr2 233650359 233650394 -17037460 + AT_rich Low_complexity Low_complexity 1 35 0 551 263 105 80 chr2 233650957 233651433 -17036421 - L1MC4 LINE L1 -177 7865 7378 279 0 0 0 chr2 233652185 233652216 -17035638 + (T)n Simple_repeat Simple_repeat 1 31 0 25 31 0 0 chr2 233652913 233652945 -17034909 + AT_rich Low_complexity Low_complexity 1 32 0 397 314 102 53 chr2 233653433 233653716 -17034138 + L3b LINE CR1 1277 1573 -10 234 0 0 0 chr2 233653834 233653860 -17033994 + (A)n Simple_repeat Simple_repeat 1 26 0 13871 135 36 33 chr2 233653986 233656192 -17031662 - Tigger1 DNA MER2_type 0 2418 203 1978 120 62 45 chr2 233656192 233656550 -17031304 - THE1B LTR MaLR 0 364 1 13871 135 36 33 chr2 233656550 233656753 -17031101 - Tigger1 DNA MER2_type -2215 203 2 4951 181 12 22 chr2 233658372 233659692 -17028162 - L1PA16 LINE L1 -9 6157 4844 1899 138 25 31 chr2 233659692 233660017 -17027837 - THE1B LTR MaLR -41 323 1 7041 218 9 11 chr2 233660017 233661724 -17026130 - L1 LINE L1 -1369 4777 3074 348 285 44 1 chr2 233662046 233662160 -17025694 + MIR SINE MIR 48 169 -39 2056 120 7 3 chr2 233662726 233663025 -17024829 - AluSc SINE Alu -9 300 1 21 36 0 0 chr2 233663027 233663055 -17024799 + AT_rich Low_complexity Low_complexity 1 28 0 320 326 97 34 chr2 233664277 233664544 -17023310 - MLT1J2 LTR MaLR -20 430 147 236 256 86 68 chr2 233664728 233664845 -17023009 + MIR SINE MIR 34 152 -110 674 302 29 29 chr2 233664971 233665216 -17022638 + MIR SINE MIR 18 262 0 206 338 65 43 chr2 233666057 233666196 -17021658 - L2 LINE L2 -456 2858 2717 215 217 0 0 chr2 233667608 233667654 -17020200 + CT-rich Low_complexity Low_complexity 2 47 0 2040 128 10 0 chr2 233667786 233668083 -17019771 - AluSx SINE Alu -12 300 1 184 211 0 0 chr2 233668158 233668196 -17019658 - MIR SINE MIR -81 127 90 21 0 0 0 chr2 233669845 233669866 -17017988 + AT_rich Low_complexity Low_complexity 1 21 0 400 350 65 0 chr2 233670349 233670549 -17017305 + MIR SINE MIR 47 259 -3 251 246 14 0 chr2 233670864 233670933 -17016921 + (TA)n Simple_repeat Simple_repeat 2 71 0 340 248 68 75 chr2 233671144 233671305 -17016549 - MER5A DNA MER1_type -2 187 28 237 341 146 16 chr2 233671637 233671760 -17016094 - L2 LINE L2 0 3272 3134 309 240 202 0 chr2 233671804 233671908 -17015946 - MIR SINE MIR -72 190 66 2110 125 3 0 chr2 233671971 233672274 -17015580 - AluSx SINE Alu -8 304 1 22 0 0 0 chr2 233674516 233674538 -17013316 + AT_rich Low_complexity Low_complexity 1 22 0 1225 217 94 7 chr2 233674575 233674874 -17012980 - MER58B DNA MER1_type -15 326 2 207 248 35 26 chr2 233675953 233676066 -17011788 + (TA)n Simple_repeat Simple_repeat 1 114 0 222 37 0 0 chr2 233676237 233676264 -17011590 + (CA)n Simple_repeat Simple_repeat 2 28 0 2824 213 22 37 chr2 233676293 233676850 -17011004 - L1MC3 LINE L1 -9 7776 7229 1325 222 60 14 chr2 233676850 233677197 -17010657 - MLT1A1 LTR MaLR -2 363 1 2824 213 22 37 chr2 233677197 233677316 -17010538 - L1MC3 LINE L1 -556 7229 7110 451 268 113 28 chr2 233679503 233679716 -17008138 + MIR SINE MIR 3 233 -29 793 320 23 4 chr2 233680104 233680360 -17007494 + MIR SINE MIR 2 262 0 1584 199 7 19 chr2 233681263 233681570 -17006284 + AluJo SINE Alu 3 305 -7 249 146 0 0 chr2 233683653 233683701 -17004153 + (TG)n Simple_repeat Simple_repeat 2 49 0 216 282 55 64 chr2 233685683 233685793 -17002061 - L2 LINE L2 -6 3307 3199 306 0 0 0 chr2 233688182 233688216 -16999638 + (A)n Simple_repeat Simple_repeat 1 34 0 301 211 137 21 chr2 233688662 233688757 -16999097 - MER5A DNA MER1_type -80 109 4 506 299 84 0 chr2 233688826 233688993 -16998861 + MER5A DNA MER1_type 9 189 0 410 268 33 12 chr2 233689005 233689129 -16998725 - MER5B DNA MER1_type -2 176 61 210 364 35 52 chr2 233689633 233689806 -16998048 + L2 LINE L2 3099 3268 -4 254 283 0 0 chr2 233689808 233689868 -16997986 - L2 LINE L2 0 3313 3254 286 294 212 12 chr2 233690310 233690480 -16997374 - MIR SINE MIR -13 249 46 21 71 0 0 chr2 233691108 233691150 -16996704 + AT_rich Low_complexity Low_complexity 1 42 0 273 350 49 24 chr2 233691173 233691296 -16996558 - L2 LINE L2 -1 3312 3187 1048 291 35 9 chr2 233692851 233693167 -16994687 + MER69 DNA AcHobo 1 324 -902 230 256 0 67 chr2 233693169 233693259 -16994595 + MER69 DNA AcHobo 2442 2525 -1 688 216 12 18 chr2 233693698 233693869 -16993985 + LTR41 LTR ERVL 11 180 -593 423 274 97 57 chr2 233694026 233694274 -16993580 + LTR41 LTR ERVL 510 767 -6 27 0 0 0 chr2 233694608 233694635 -16993219 + AT_rich Low_complexity Low_complexity 1 27 0 249 309 95 66 chr2 233695099 233695342 -16992512 + MLT1J1 LTR MaLR 36 285 -161 1403 202 103 29 chr2 233695494 233695835 -16992019 - MLT1A2 LTR MaLR -7 367 2 22 35 0 0 chr2 233696089 233696118 -16991736 + AT_rich Low_complexity Low_complexity 1 29 0 22449 29 3 0 chr2 233696424 233699899 -16987955 + L1PA4 LINE L1 2675 6152 -3 266 290 75 59 chr2 233700552 233700738 -16987116 - LTR16A LTR ERVL -5 445 257 390 289 108 40 chr2 233700917 233701166 -16986688 + L1ME LINE L1 4566 4831 -1315 230 87 0 0 chr2 233701201 233701247 -16986607 + LTR66 LTR ERVL 394 439 -171 306 305 64 72 chr2 233701286 233701647 -16986207 + L1ME LINE L1 4877 5234 -912 315 282 87 41 chr2 233701712 233701907 -16985947 + L1ME LINE L1 5325 5528 -2280 1177 181 4 31 chr2 233701912 233702138 -16985716 - AluJo SINE Alu -5 307 88 2154 127 0 16 chr2 233702178 233702492 -16985362 - AluSx SINE Alu -1 311 3 254 170 0 43 chr2 233702496 233702543 -16985311 + L1ME LINE L1 5555 5599 -522 847 269 95 10 chr2 233702718 233703023 -16984831 - MLT1I LTR MaLR -24 385 55 243 0 0 0 chr2 233703812 233703839 -16984015 + (CA)n Simple_repeat Simple_repeat 2 28 0 236 140 0 18 chr2 233703918 233703975 -16983879 + (TA)n Simple_repeat Simple_repeat 2 57 0 310 250 0 43 chr2 233703977 233704069 -16983785 + L1MC4 LINE L1 6614 6701 -1341 1319 226 70 53 chr2 233704082 233704552 -16983302 - MLT2B1 LTR ERVL -42 478 1 1739 73 0 9 chr2 233704958 233705191 -16982663 - L1PA7 LINE L1 -1 6153 5923 329 291 107 56 chr2 233707535 233707769 -16980085 + MIR SINE MIR 9 254 -8 1554 227 111 23 chr2 233707853 233708294 -16979560 + MLT2B1 LTR ERVL 1 480 -40 225 139 0 0 chr2 233708300 233708343 -16979511 + (TA)n Simple_repeat Simple_repeat 1 43 0 349 123 0 0 chr2 233708354 233708411 -16979443 + MLT2B1 LTR ERVL 464 520 0 286 341 37 30 chr2 233710515 233710650 -16977204 + L2 LINE L2 3137 3272 0 1502 249 75 27 chr2 233711372 233711813 -16976041 + MLT2B1 LTR ERVL 1 462 -58 195 100 0 0 chr2 233711967 233711997 -16975857 + (TTTTC)n Simple_repeat Simple_repeat 1 30 0 238 339 71 16 chr2 233712671 233712798 -16975056 + L2 LINE L2 2688 2821 -493 511 369 95 12 chr2 233712848 233713184 -16974670 + L2 LINE L2 2910 3273 -40 28 0 0 0 chr2 233713608 233713636 -16974218 + AT_rich Low_complexity Low_complexity 1 28 0 2383 72 10 0 chr2 233715168 233715473 -16972381 + AluY SINE Alu 1 308 -3 194 258 67 67 chr2 233715629 233715749 -16972105 - L2 LINE L2 -562 2752 2633 244 145 16 16 chr2 233716491 233716553 -16971301 + (TA)n Simple_repeat Simple_repeat 2 63 0 196 197 14 28 chr2 233718022 233718093 -16969761 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 986 192 48 0 chr2 233718750 233718958 -16968896 + MER20 DNA MER1_type 1 218 -1 247 150 0 0 chr2 233720322 233720362 -16967492 + L2 LINE L2 3270 3309 -4 261 98 0 0 chr2 233721152 233721193 -16966661 + (CA)n Simple_repeat Simple_repeat 1 41 0 21 36 0 0 chr2 233721991 233722019 -16965835 + AT_rich Low_complexity Low_complexity 1 28 0 239 338 55 7 chr2 233722547 233722692 -16965162 + L2 LINE L2 3161 3312 -1 215 114 23 0 chr2 233723511 233723555 -16964299 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 1695 187 0 10 chr2 233724238 233724527 -16963327 - AluJb SINE Alu -26 286 1 319 330 57 78 chr2 233725453 233725735 -16962119 - L2 LINE L2 -5 3267 2992 918 246 71 61 chr2 233725832 233726129 -16961725 - MER45R DNA AcHobo -1281 300 1 4334 111 100 136 chr2 233726740 233728170 -16959684 + pTR5 LTR ERV1 743 2438 0 281 328 80 16 chr2 233728532 233728657 -16959197 + MER5B DNA MER1_type 4 136 -42 734 178 41 56 chr2 233728704 233728901 -16958953 - L1ME1 LINE L1 -204 5962 5769 21 0 0 0 chr2 233729254 233729275 -16958579 + AT_rich Low_complexity Low_complexity 1 21 0 2164 104 0 10 chr2 233729365 233729653 -16958201 - AluSg SINE Alu -25 285 1 491 253 0 3 chr2 233729900 233730083 -16957771 - MER2 DNA MER2_type 0 345 113 6463 14 0 1 chr2 233730347 233731083 -16956771 + L1PA3 LINE L1 5418 6152 -3 23 33 0 0 chr2 233731083 233731113 -16956741 + AT_rich Low_complexity Low_complexity 1 30 0 5500 121 9 10 chr2 233731752 233732627 -16955227 + L1PA15 LINE L1 5290 6165 0 1717 218 69 19 chr2 233732746 233733178 -16954676 + MLT1C LTR MaLR 6 459 -8 249 365 61 0 chr2 233733341 233733489 -16954365 + MER5A DNA MER1_type 26 182 -7 21 0 0 0 chr2 233733896 233733917 -16953937 + AT_rich Low_complexity Low_complexity 1 21 0 2017 144 10 0 chr2 233734538 233734837 -16953017 - AluSx SINE Alu -9 303 2 184 75 25 25 chr2 233735096 233735136 -16952718 + (TTA)n Simple_repeat Simple_repeat 1 40 0 1322 188 11 23 chr2 233736285 233736546 -16951308 - L1MDa LINE L1 -6089 451 194 298 167 35 9 chr2 233736642 233736756 -16951098 + (TA)n Simple_repeat Simple_repeat 1 117 0 35 63 0 0 chr2 233736761 233736824 -16951030 + AT_rich Low_complexity Low_complexity 1 63 0 403 255 42 31 chr2 233737074 233737266 -16950588 - L1ME LINE L1 -628 5542 5349 814 260 42 8 chr2 233737335 233737696 -16950158 - L1ME LINE L1 -3057 3089 2717 409 180 22 31 chr2 233737878 233738375 -16949479 + (TA)n Simple_repeat Simple_repeat 1 492 0 423 0 0 0 chr2 233738426 233738473 -16949381 + (TA)n Simple_repeat Simple_repeat 1 47 0 249 33 0 0 chr2 233741118 233741148 -16946706 + (A)n Simple_repeat Simple_repeat 1 30 0 2145 81 20 37 chr2 233741148 233741445 -16946409 + AluY SINE Alu 1 292 -19 232 384 18 9 chr2 233741445 233741557 -16946297 + MER5A DNA MER1_type 70 182 -7 1123 204 79 0 chr2 233743592 233743832 -16944022 - LTR8A LTR ERV1 0 727 469 260 176 11 33 chr2 233743969 233744060 -16943794 + (TA)n Simple_repeat Simple_repeat 2 90 0 24 0 0 0 chr2 233744218 233744242 -16943612 + AT_rich Low_complexity Low_complexity 1 24 0 709 187 160 0 chr2 233744438 233744588 -16943266 + FAM SINE Alu 1 174 -1 1927 82 41 212 chr2 233744611 233745074 -16942780 + MLT2A2 LTR ERVL 1 384 -69 423 20 0 0 chr2 233745094 233745145 -16942709 - L1PA6 LINE L1 -6 6148 6098 2218 201 90 0 chr2 233745307 233745764 -16942090 + MLT2B1 LTR ERVL 22 519 -1 206 85 0 64 chr2 233745960 233746007 -16941847 + (A)n Simple_repeat Simple_repeat 1 44 0 2134 99 11 0 chr2 233746107 233746391 -16941463 + AluSp SINE Alu 1 287 -26 2317 103 0 0 chr2 233746973 233747274 -16940580 - AluY SINE Alu -10 301 1 1993 224 82 56 chr2 233747776 233748316 -16939538 + MLT2B3 LTR ERVL 1 554 0 1571 177 122 6 chr2 233748367 233748694 -16939160 + MLT1A1 LTR MaLR 1 365 0 803 320 86 32 chr2 233750345 233750820 -16937034 + MLT1J LTR MaLR 1 501 -10 630 281 140 14 chr2 233750872 233751093 -16936761 - MIR SINE MIR 0 262 14 199 322 17 0 chr2 233751234 233751293 -16936561 - L2 LINE L2 -12 3301 3242 238 309 62 0 chr2 233751406 233751487 -16936367 + MIR SINE MIR 160 245 -17 195 250 103 44 chr2 233751493 233751561 -16936293 - MIR SINE MIR -86 176 105 921 324 39 5 chr2 233751571 233751957 -16935897 - LTR16A LTR ERVL 0 450 52 186 240 0 0 chr2 233752504 233752554 -16935300 + (TATG)n Simple_repeat Simple_repeat 3 52 0 21 0 0 0 chr2 233752593 233752614 -16935240 + AT_rich Low_complexity Low_complexity 1 21 0 227 189 19 0 chr2 233752870 233752923 -16934931 - MER103 DNA DNA -105 61 8 2126 143 19 40 chr2 233753323 233753695 -16934159 + THE1B LTR MaLR 1 364 0 187 364 66 33 chr2 233754203 233754324 -16933530 - L2 LINE L2 -9 3263 3139 386 176 0 0 chr2 233754873 233754941 -16932913 - MER94 DNA DNA -62 72 5 1944 138 3 26 chr2 233755753 233756057 -16931797 - AluSx SINE Alu -14 298 2 1007 189 11 5 chr2 233756607 233756797 -16931057 - MER3 DNA MER1_type 0 209 19 1825 199 14 11 chr2 233757275 233757627 -16930227 - MLT1A1 LTR MaLR 0 365 13 243 245 0 0 chr2 233757684 233757733 -16930121 + MLT1A2 LTR MaLR 326 374 0 3329 210 14 51 chr2 233757733 233757959 -16929895 + MLT1A1-int LTR MaLR 1 234 -1501 1205 193 169 48 chr2 233757959 233758338 -16929516 - MSTC LTR MaLR 0 428 4 3329 210 14 51 chr2 233758338 233758882 -16928972 + MLT1A1-int LTR MaLR 234 743 -992 407 310 32 45 chr2 233758987 233759142 -16928712 + MLT1A1-int LTR MaLR 1264 1416 -319 1735 207 36 25 chr2 233759150 233759542 -16928312 + MLT1A1-int LTR MaLR 1340 1735 0 1603 213 3 42 chr2 233759542 233759922 -16927932 + MLT1A1 LTR MaLR 1 365 0 393 320 67 52 chr2 233760393 233760662 -16927192 - L2 LINE L2 0 3313 3041 339 321 9 9 chr2 233760866 233760978 -16926876 - L2 LINE L2 0 3272 3161 395 261 124 33 chr2 233762088 233762241 -16925613 - MIR SINE MIR -30 232 66 22 0 0 0 chr2 233762348 233762370 -16925484 + AT_rich Low_complexity Low_complexity 1 22 0 1241 254 66 33 chr2 233762841 233763326 -16924528 - MLT1D LTR MaLR -2 503 3 24 0 0 0 chr2 233763933 233763957 -16923897 + AT_rich Low_complexity Low_complexity 1 24 0 200 159 0 23 chr2 233765414 233765458 -16922396 + CT-rich Low_complexity Low_complexity 2 44 0 731 150 11 28 chr2 233765473 233765653 -16922201 + CT-rich Low_complexity Low_complexity 2 178 0 440 159 44 0 chr2 233765769 233765882 -16921972 + CT-rich Low_complexity Low_complexity 1 118 0 263 304 94 33 chr2 233766112 233766293 -16921561 + Charlie8 DNA MER1_type 2 193 -2224 366 200 113 35 chr2 233766446 233766561 -16921293 - MIR SINE MIR -30 232 109 1478 112 45 14 chr2 233767388 233767611 -16920243 - MER30 DNA MER1_type 0 230 1 253 328 0 32 chr2 233767968 233768093 -16919761 - L1MA10 LINE L1 -3 6331 6211 27 0 0 0 chr2 233768159 233768186 -16919668 + AT_rich Low_complexity Low_complexity 1 27 0 321 274 0 42 chr2 233768283 233768378 -16919476 - L1MC4 LINE L1 -1339 6703 6613 189 0 0 0 chr2 233768379 233768400 -16919454 + (TA)n Simple_repeat Simple_repeat 2 22 0 1370 183 19 40 chr2 233769782 233770104 -16917750 - L1MA7 LINE L1 -6 6285 5971 1724 175 0 7 chr2 233770167 233770458 -16917396 - AluJo SINE Alu -23 289 1 1245 197 28 30 chr2 233770880 233771216 -16916638 + MLT2B3 LTR ERVL 224 554 0 1336 98 10 25 chr2 233771253 233771456 -16916398 - MLT2A2 LTR ERVL -238 215 16 893 127 0 60 chr2 233771459 233771609 -16916245 + MLT1A1 LTR MaLR 225 365 0 336 188 0 0 chr2 233771632 233771701 -16916153 + (CATA)n Simple_repeat Simple_repeat 3 71 0 242 204 0 0 chr2 233771872 233771921 -16915933 + MLT2B1 LTR ERVL 466 514 -6 501 264 20 40 chr2 233771925 233772126 -16915728 + L1M4 LINE L1 4164 4360 -1786 661 251 40 16 chr2 233772200 233772447 -16915407 + L1M4 LINE L1 4370 4622 -1524 3776 238 26 54 chr2 233772454 233773294 -16914560 - L1M4 LINE L1 -1495 4651 3869 1772 168 3 3 chr2 233773294 233773602 -16914252 - AluSx SINE Alu 0 308 1 3776 238 26 54 chr2 233773602 233774258 -16913596 - L1M4 LINE L1 -2277 3869 3196 21 36 0 0 chr2 233774609 233774637 -16913217 + AT_rich Low_complexity Low_complexity 1 28 0 193 355 50 21 chr2 233774742 233774883 -16912971 + MIR SINE MIR 3 147 -115 22 0 0 0 chr2 233775227 233775249 -16912605 + AT_rich Low_complexity Low_complexity 1 22 0 919 254 156 32 chr2 233775277 233775804 -16912050 + L1MEc LINE L1 1759 2350 -4046 * 1082 273 10 0 chr2 233775783 233776080 -16911774 + L1ME1 LINE L1 5933 6232 -3 777 51 0 0 chr2 233776381 233776479 -16911375 + (TTCC)n Simple_repeat Simple_repeat 3 100 0 2051 101 40 24 chr2 233777996 233778292 -16909562 + AluY SINE Alu 1 301 -10 29 0 0 0 chr2 233779111 233779140 -16908714 + AT_rich Low_complexity Low_complexity 1 29 0 413 226 210 11 chr2 233779168 233779354 -16908500 + L1MEc LINE L1 1759 1981 -4415 1203 278 73 5 chr2 233779788 233780184 -16907670 - MLT1C LTR MaLR -42 425 3 310 350 80 12 chr2 233780298 233780708 -16907146 - L1ME LINE L1 -301 5820 5380 31 26 0 0 chr2 233780841 233780879 -16906975 + AT_rich Low_complexity Low_complexity 1 38 0 487 323 121 28 chr2 233781023 233781453 -16906401 + MLT1J LTR MaLR 1 470 -41 23 0 0 0 chr2 233781626 233781649 -16906205 + AT_rich Low_complexity Low_complexity 1 23 0 219 309 113 118 chr2 233782753 233783167 -16904687 - L2 LINE L2 -52 3220 2809 198 359 62 31 chr2 233783305 233783497 -16904357 - L2 LINE L2 -712 2602 2405 1896 170 37 21 chr2 233783597 233783979 -16903875 - MLT1B LTR MaLR -2 388 1 2150 115 52 27 chr2 233784395 233784761 -16903093 + THE1C LTR MaLR 1 375 0 589 206 76 80 chr2 233785835 233786111 -16901743 - MER5C DNA MER1_type 0 324 50 315 71 0 0 chr2 233786222 233786264 -16901590 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 1644 184 0 37 chr2 233786264 233786585 -16901269 - AluJb SINE Alu -3 309 1 1558 281 75 36 chr2 233786588 233787300 -16900554 - L2 LINE L2 -238 3075 2285 3103 287 87 42 chr2 233787304 233787455 -16900399 - L2 LINE L2 -1491 1823 1680 2174 127 3 0 chr2 233787455 233787763 -16900091 - AluSp SINE Alu -4 309 1 3103 287 87 42 chr2 233787763 233789079 -16898775 - L2 LINE L2 -1634 1680 289 1452 206 78 62 chr2 233789197 233789648 -16898206 + MLT1C LTR MaLR 10 467 0 368 247 90 110 chr2 233789648 233789948 -16897906 - MLT1H LTR MaLR -18 531 238 230 324 99 27 chr2 233791167 233791278 -16896576 - MER5C DNA MER1_type -205 119 1 23 101 0 0 chr2 233791590 233791669 -16896185 + AT_rich Low_complexity Low_complexity 1 79 0 7563 140 32 6 chr2 233791676 233792940 -16894914 - HSMAR2 DNA Mariner -2 1300 3 195 69 0 0 chr2 233793105 233793134 -16894720 + (CA)n Simple_repeat Simple_repeat 1 29 0 1987 135 23 57 chr2 233793701 233794087 -16893767 - THE1C LTR MaLR -2 373 1 219 308 19 0 chr2 233794318 233794370 -16893484 + MIR SINE MIR 29 81 -181 2032 144 35 46 chr2 233794899 233795267 -16892587 + THE1B LTR MaLR 1 364 0 224 182 55 18 chr2 233795821 233795876 -16891978 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 24 32 0 0 chr2 233796183 233796214 -16891640 + AT_rich Low_complexity Low_complexity 1 31 0 229 299 134 0 chr2 233796283 233796380 -16891474 - MER91C DNA MER1_type -30 110 1 184 286 0 0 chr2 233796399 233796448 -16891406 - L2 LINE L2 -338 2975 2927 199 165 25 38 chr2 233796572 233796651 -16891203 + GA-rich Low_complexity Low_complexity 2 79 0 218 250 0 0 chr2 233797957 233798005 -16889849 - L2 LINE L2 -5 3308 3261 3323 155 91 21 chr2 233798727 233799406 -16888448 + LTR8A LTR ERV1 1 727 0 456 19 0 0 chr2 233799467 233799520 -16888334 + (CA)n Simple_repeat Simple_repeat 2 54 0 544 269 16 27 chr2 233799530 233799716 -16888138 + MLT2E LTR ERVL 443 626 -2 224 302 75 19 chr2 233799733 233799839 -16888015 - L2 LINE L2 -587 2727 2616 900 244 48 39 chr2 233800127 233800480 -16887374 + MSTD LTR MaLR 6 396 0 257 222 0 86 chr2 233800634 233800715 -16887139 + MIR SINE MIR 119 192 -70 239 276 46 83 chr2 233800727 233800944 -16886910 + L2 LINE L2 3099 3307 -6 229 274 55 0 chr2 233801563 233801636 -16886218 - MER20B DNA MER1_type -650 133 57 253 257 111 49 chr2 233801905 233802049 -16885805 - MIR SINE MIR -41 221 69 1387 215 58 12 chr2 233802054 233802315 -16885539 - MER58B DNA MER1_type -2079 341 61 2116 112 49 25 chr2 233802315 233802681 -16885173 + THE1C LTR MaLR 1 375 0 1387 215 58 12 chr2 233802681 233802745 -16885109 - MER58B DNA MER1_type -2359 61 1 224 340 29 10 chr2 233804427 233804530 -16883324 - L2 LINE L2 -25 3247 3143 247 324 130 0 chr2 233804835 233804943 -16882911 - MIR SINE MIR -100 162 41 804 284 38 8 chr2 233804949 233805188 -16882666 + MIR SINE MIR 10 255 -7 2099 128 20 14 chr2 233806248 233806601 -16881253 + HSMAR2 DNA Mariner 2 356 -946 28412 137 12 60 chr2 233806601 233813082 -16874772 + L1PA8 LINE L1 25 6184 0 207 0 0 0 chr2 233813094 233813117 -16874737 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5692 144 6 34 chr2 233813117 233813599 -16874255 + HSMAR2 DNA Mariner 316 757 -545 457 75 0 0 chr2 233813599 233813666 -16874188 - L1PA8 LINE L1 0 6172 6106 5692 144 6 34 chr2 233813666 233814197 -16873657 + HSMAR2 DNA Mariner 757 1301 -1 446 257 96 15 chr2 233814461 233814597 -16873257 + MIR SINE MIR 116 262 0 414 243 198 0 chr2 233815858 233815969 -16871885 - AluJo SINE Alu -167 135 3 1886 22 0 0 chr2 233816402 233816624 -16871230 + L1PA2 LINE L1 5929 6150 -5 445 276 21 32 chr2 233817124 233817329 -16870525 - L1MC/D LINE L1 -458 5663 5540 399 346 106 14 chr2 233817886 233818094 -16869760 + MIR SINE MIR 34 260 -2 2060 176 49 33 chr2 233818247 233818793 -16869061 - MLT2A2 LTR ERVL 0 554 1 3429 130 27 12 chr2 233820356 233820919 -16866935 + LTR38B LTR ERV1 1 571 -39 580 188 16 8 chr2 233820910 233821038 -16866816 + LTR38B LTR ERV1 480 608 -2 * 447 280 92 30 chr2 233821500 233821836 -16866018 + L1ME LINE L1 657 1013 -5057 852 268 187 42 chr2 233821836 233822157 -16865697 + MLT1G3 LTR MaLR 1 327 -203 697 311 24 0 chr2 233822193 233822399 -16865455 + LTR16A LTR ERVL 240 450 0 22 0 0 0 chr2 233822572 233822594 -16865260 + AT_rich Low_complexity Low_complexity 1 22 0 378 308 89 34 chr2 233822781 233823195 -16864659 + L1ME LINE L1 5295 5775 -346 4163 204 75 4 chr2 233823195 233824033 -16863821 - MER54A LTR ERVL -3 898 1 378 308 89 34 chr2 233824033 233824086 -16863768 + L1ME LINE L1 5775 5824 -297 395 264 107 25 chr2 233824109 233824268 -16863586 + MER97b DNA MER1_type? 6 177 -876 555 118 0 0 chr2 233824268 233824353 -16863501 + AluJ/FLAM SINE Alu 1 85 -227 2022 135 0 7 chr2 233826843 233827147 -16860707 - AluJb SINE Alu -10 302 1 23 0 0 0 chr2 233827258 233827281 -16860573 + AT_rich Low_complexity Low_complexity 1 23 0 407 253 19 65 chr2 233827553 233827652 -16860202 - MIR SINE MIR -10 252 161 1000 268 96 26 chr2 233827652 233828067 -16859787 - MLT1J1 LTR MaLR 0 446 3 407 253 19 65 chr2 233828067 233828121 -16859733 - MIR SINE MIR -101 161 106 25 0 0 0 chr2 233829285 233829310 -16858544 + AT_rich Low_complexity Low_complexity 1 25 0 26 74 0 0 chr2 233829331 233829385 -16858469 + AT_rich Low_complexity Low_complexity 1 54 0 14173 155 13 13 chr2 233829518 233831922 -16855932 - Tigger1 DNA MER2_type -14 2404 1 382 294 72 36 chr2 233831965 233832186 -16855668 + L2 LINE L2 3085 3313 0 2353 221 32 99 chr2 233832226 233833026 -16854828 - L1MD2 LINE L1 -8 6234 5488 252 184 0 0 chr2 233833030 233833079 -16854775 + (TG)n Simple_repeat Simple_repeat 2 50 0 2682 137 39 5 chr2 233833084 233833515 -16854339 - Tigger2 DNA MER2_type 0 2718 2273 386 159 14 14 chr2 233833505 233833574 -16854280 - Tigger2 DNA MER2_type -2649 69 1 * 453 156 292 39 chr2 233833581 233833735 -16854119 - L1MD2 LINE L1 -778 5464 5272 * 7435 203 55 29 chr2 233833732 233834866 -16852988 - L1PA2 LINE L1 -1 6548 5445 2208 75 0 38 chr2 233834866 233835184 -16852670 - AluY SINE Alu -5 306 1 7435 203 55 29 chr2 233835184 233836630 -16851224 - L1PA2 LINE L1 -1104 5445 4038 1989 141 0 3 chr2 233836630 233836927 -16850927 + AluSx SINE Alu 1 296 -16 7435 203 55 29 chr2 233836927 233838385 -16849469 - L1PA2 LINE L1 -2511 4038 2394 2127 179 77 26 chr2 233838427 233838970 -16848884 - L1MDa LINE L1 -4296 2244 1674 1722 184 10 3 chr2 233839039 233839338 -16848516 + AluJb SINE Alu 1 301 -11 1070 268 72 14 chr2 233839399 233839817 -16848037 + L1MC3 LINE L1 569 1010 -5035 * 1430 238 189 7 chr2 233839807 233840396 -16847458 + L1MC3 LINE L1 1445 2140 -4424 677 241 85 30 chr2 233840463 233840733 -16847121 - L1MCa LINE L1 -4009 2417 2133 9070 229 58 45 chr2 233840751 233841446 -16846408 + L1MC3 LINE L1 3064 3749 -4454 1554 174 65 0 chr2 233841446 233841722 -16846132 + AluJo SINE Alu 1 294 -18 9070 229 58 45 chr2 233841722 233842799 -16845055 + L1MC3 LINE L1 3749 4811 -3392 2436 130 8 3 chr2 233842799 233843161 -16844693 - THE1B LTR MaLR 0 364 1 9070 229 58 45 chr2 233843161 233845953 -16841901 + L1MC3 LINE L1 4811 7567 -636 1555 217 100 0 chr2 233845953 233846313 -16841541 + MSTD LTR MaLR 1 396 0 9070 229 58 45 chr2 233846313 233846638 -16841216 + L1MC3 LINE L1 7567 8014 -189 230 0 0 32 chr2 233846638 233846669 -16841185 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 9070 229 58 45 chr2 233846669 233846862 -16840992 + L1MC3 LINE L1 8014 8203 0 1394 93 10 0 chr2 233846906 233847111 -16840743 + L1MA2 LINE L1 6098 6304 0 304 227 27 0 chr2 233848130 233848205 -16839649 + MER116 DNA Mariner 1 77 -3 780 312 39 21 chr2 233849228 233849609 -16838245 - MER90 LTR ERV1 -13 562 175 265 177 9 35 chr2 233851810 233851923 -16835931 + (TA)n Simple_repeat Simple_repeat 1 110 0 1745 241 82 12 chr2 233852162 233852648 -16835206 - MLT2B1 LTR ERVL 0 520 1 209 33 33 0 chr2 233852853 233852883 -16834971 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr2 233853126 233853147 -16834707 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr2 233853263 233853291 -16834563 + AT_rich Low_complexity Low_complexity 1 28 0 393 200 12 25 chr2 233853328 233853408 -16834446 + Tigger5 DNA MER2_type 1 79 -2244 * 1219 177 25 16 chr2 233853399 233853452 -16834402 + Tigger5 DNA MER2_type 2079 2130 -193 857 81 0 0 chr2 233853452 233853756 -16834098 + AluSp SINE Alu 1 304 0 1219 177 25 16 chr2 233853756 233853944 -16833910 + Tigger5 DNA MER2_type 2130 2323 0 694 239 117 0 chr2 233853945 233854093 -16833761 - L1MD2 LINE L1 -65 6294 6116 288 0 0 0 chr2 233854093 233854125 -16833729 + (TG)n Simple_repeat Simple_repeat 2 33 0 694 239 117 0 chr2 233854125 233854173 -16833681 - L1MD2 LINE L1 -243 6116 6075 2012 153 68 0 chr2 233854466 233854806 -16833048 + THE1B LTR MaLR 1 363 -1 242 284 122 34 chr2 233855071 233855219 -16832635 + MIR SINE MIR 95 255 -7 195 129 0 0 chr2 233855238 233855269 -16832585 + (CA)n Simple_repeat Simple_repeat 2 32 0 352 341 76 36 chr2 233855487 233855736 -16832118 + L2 LINE L2 2811 3069 -244 5847 29 0 0 chr2 233855745 233856441 -16831413 - L1PA2 LINE L1 -981 5165 4470 7869 11 1 0 chr2 233856441 233857449 -16830405 + L1PA2 LINE L1 5143 6151 -4 1731 149 176 16 chr2 233857477 233857846 -16830008 - MSTA LTR MaLR 0 428 1 363 336 131 41 chr2 233858120 233858225 -16829629 + L2 LINE L2 2388 2482 -832 455 175 32 127 chr2 233858225 233858351 -16829503 - MER81 DNA DNA 0 114 1 363 336 131 41 chr2 233858351 233858786 -16829068 + L2 LINE L2 2482 2977 -337 1257 194 158 36 chr2 233859480 233859816 -16828038 + MLT1E1 LTR MaLR 39 415 -239 225 154 0 58 chr2 233859845 233859897 -16827957 - MER116 DNA Mariner -5 75 27 856 238 5 5 chr2 233859933 233860126 -16827728 - MLT1E3 LTR MaLR -6 618 426 432 213 241 24 chr2 233861072 233861087 -16826767 - L2 LINE L2 -1 3312 3302 813 92 0 0 chr2 233861087 233861207 -16826647 + (TTCC)n Simple_repeat Simple_repeat 1 120 0 432 213 241 24 chr2 233861207 233861398 -16826456 - L2 LINE L2 -11 3302 3061 1187 172 51 0 chr2 233861569 233861784 -16826070 - MER30 DNA MER1_type 0 230 5 195 332 11 36 chr2 233862257 233862349 -16825505 + MIR SINE MIR 20 108 -100 685 216 115 7 chr2 233863147 233863295 -16824559 - FAM SINE Alu -10 165 2 340 351 82 26 chr2 233864674 233864905 -16822949 + MIR SINE MIR 19 262 0 6409 151 45 13 chr2 233865288 233866479 -16821375 + Tigger3b DNA MER2_type 2 1231 0 1115 150 17 60 chr2 233866481 233866714 -16821140 + Tigger2a DNA MER2_type 1 223 -211 614 119 40 0 chr2 233866711 233866812 -16821042 - Tigger2 DNA MER2_type -87 2631 2527 * 365 345 64 78 chr2 233867303 233867775 -16820079 - MLT1K LTR MaLR -86 502 38 707 311 48 22 chr2 233867980 233868253 -16819601 + MLT1I LTR MaLR 128 407 -2 21 71 0 0 chr2 233868374 233868416 -16819438 + AT_rich Low_complexity Low_complexity 1 42 0 4847 189 26 1 chr2 233868425 233869332 -16818522 + L1M3f LINE L1 4 933 -4395 * 5283 164 36 17 chr2 233869331 233870341 -16817513 + L1MA4 LINE L1 5177 6209 -91 1538 314 16 92 chr2 233870341 233870831 -16817023 + MLT2A2 LTR ERVL 1 453 0 5283 164 36 17 chr2 233870831 233870920 -16816934 + L1MA4 LINE L1 6209 6295 -5 391 324 54 27 chr2 233871204 233871352 -16816502 + L2 LINE L2 3106 3257 -15 25 31 0 0 chr2 233872874 233872906 -16814948 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 233873111 233873132 -16814722 + AT_rich Low_complexity Low_complexity 1 21 0 226 244 22 22 chr2 233873629 233873719 -16814135 + GA-rich Low_complexity Low_complexity 2 91 0 388 258 62 55 chr2 233874552 233874680 -16813174 - L2 LINE L2 -8 3305 3177 964 224 0 0 chr2 233874704 233874900 -16812954 + L1PA16 LINE L1 5952 6147 -19 182 37 37 0 chr2 233874907 233874934 -16812920 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 550 251 52 47 chr2 233875264 233875455 -16812399 - LTR33 LTR ERVL -23 498 307 621 310 18 0 chr2 233875552 233875723 -16812131 - LTR33 LTR ERVL -343 178 5 277 224 299 27 chr2 233877915 233878062 -16809792 - MER5A DNA MER1_type 0 189 3 286 167 33 0 chr2 233878927 233878987 -16808867 - L1ME1 LINE L1 -9 6157 6096 316 235 12 0 chr2 233878990 233879071 -16808783 - L1MC2 LINE L1 -13 6331 6250 396 169 0 36 chr2 233879071 233879154 -16808700 + L1MC1 LINE L1 6181 6260 -73 943 176 82 61 chr2 233879212 233879265 -16808589 - L1MD2 LINE L1 -315 6044 5992 329 291 13 51 chr2 233879265 233879499 -16808355 - L1MB1 LINE L1 -185 5983 5759 330 253 46 11 chr2 233879950 233880037 -16807817 + L1M1 LINE L1 19 108 -7457 857 214 86 24 chr2 233880040 233880250 -16807604 + L1M1 LINE L1 356 578 -6987 * 14199 166 29 4 chr2 233880246 233884687 -16803167 + L1M1 LINE L1 2029 6579 -986 979 202 5 52 chr2 233885134 233885343 -16802511 - L1M4 LINE L1 -3750 2632 2434 4367 112 8 62 chr2 233885343 233886073 -16801781 + LTR8 LTR ERV1 1 691 0 979 202 5 52 chr2 233886073 233886176 -16801678 - L1M4 LINE L1 -3948 2434 2328 191 137 0 20 chr2 233886292 233886343 -16801511 + (TTTTTG)n Simple_repeat Simple_repeat 6 55 0 213 196 10 69 chr2 233886344 233886446 -16801408 + T-rich Low_complexity Low_complexity 3 98 0 1642 281 31 43 chr2 233887368 233887972 -16799882 - MLT1E3 LTR MaLR -27 597 1 464 265 23 15 chr2 233887971 233888103 -16799751 + MER69 DNA AcHobo 4 136 -2390 * 188 146 0 21 chr2 233888242 233888290 -16799564 + (TAAAAA)n Simple_repeat Simple_repeat 2 48 0 253 341 12 0 chr2 233888557 233888639 -16799215 + MLT1G LTR MaLR 55 137 -458 385 280 69 90 chr2 233888733 233888922 -16798932 + MLT1G LTR MaLR 203 387 -203 180 0 0 0 chr2 233889199 233889219 -16798635 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 191 320 0 51 chr2 233889407 233889485 -16798369 - MIR3 SINE MIR -21 187 114 432 156 0 0 chr2 233889719 233889796 -16798058 + Alu SINE Alu 234 310 0 31 26 0 0 chr2 233890172 233890210 -16797644 + AT_rich Low_complexity Low_complexity 1 38 0 556 298 30 13 chr2 233890411 233890646 -16797208 - L1ME3A LINE L1 -13 6157 5919 453 250 0 0 chr2 233890711 233890819 -16797035 - L1ME3A LINE L1 -365 5805 5698 460 335 6 0 chr2 233890861 233891031 -16796823 - MIR SINE MIR -36 226 56 244 272 146 61 chr2 233891027 233891240 -16796614 - L2 LINE L2 0 3313 3083 * 266 301 54 21 chr2 233891392 233891485 -16796369 - L2 LINE L2 -195 3118 3023 2108 100 0 10 chr2 233891557 233891847 -16796007 - AluSx SINE Alu -7 305 19 640 316 121 44 chr2 233891893 233892232 -16795622 - L2 LINE L2 -341 2973 2609 314 121 0 17 chr2 233893239 233893297 -16794557 + (GGAA)n Simple_repeat Simple_repeat 1 57 0 328 233 22 11 chr2 233893298 233893388 -16794466 + GA-rich Low_complexity Low_complexity 2 92 0 229 205 13 26 chr2 233893661 233893739 -16794115 + GA-rich Low_complexity Low_complexity 1 77 0 1261 136 5 5 chr2 233893972 233894186 -16793668 - L1MA7 LINE L1 -33 6258 6045 27 29 0 0 chr2 233894220 233894254 -16793600 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 233894399 233894427 -16793427 + AT_rich Low_complexity Low_complexity 1 28 0 237 234 78 0 chr2 233894662 233894726 -16793128 + MIR SINE MIR 83 151 -111 205 256 0 0 chr2 233894743 233894786 -16793068 + (TTG)n Simple_repeat Simple_repeat 3 45 0 813 268 179 55 chr2 233894795 233895321 -16792533 + MLT1E LTR MaLR 1 591 -2 1746 128 0 0 chr2 233896446 233896688 -16791166 + AluSq SINE Alu 1 242 -71 977 283 61 67 chr2 233897493 233897646 -16790208 + L1ME LINE L1 2 154 -5916 2571 106 14 22 chr2 233897646 233898013 -16789841 + THE1B LTR MaLR 1 364 0 977 283 61 67 chr2 233898013 233898626 -16789228 + L1ME LINE L1 154 766 -5304 9100 221 41 52 chr2 233898629 233901458 -16786396 + L1M2 LINE L1 2 2627 -4222 1973 205 14 16 chr2 233901446 233901963 -16785891 + L1M2 LINE L1 3784 4299 -2549 * 623 154 0 0 chr2 233901960 233902064 -16785790 + L1M2 LINE L1 4634 4737 -2111 * 603 216 26 0 chr2 233902064 233902180 -16785674 + MLT1A1 LTR MaLR 247 365 0 5810 42 4 1 chr2 233902199 233903454 -16784400 + L1PA4 LINE L1 4712 5970 -185 294 191 0 93 chr2 233903554 233903716 -16784138 + G-rich Low_complexity Low_complexity 4 150 0 1421 281 124 7 chr2 233903813 233904378 -16783476 + MER69 DNA AcHobo 77 707 -519 657 266 59 14 chr2 233904429 233904719 -16783135 + MER69 DNA AcHobo 1476 1778 -748 757 174 46 41 chr2 233904754 233904973 -16782881 + MER69 DNA AcHobo 2285 2504 -22 1566 219 40 21 chr2 233905220 233905587 -16782267 - L1MB2 LINE L1 0 6171 5812 * 4629 161 74 6 chr2 233905581 233906360 -16781494 - L1MA4 LINE L1 0 6300 5575 208 51 26 26 chr2 233906360 233906399 -16781455 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4629 161 74 6 chr2 233906399 233907359 -16780495 - L1MA4 LINE L1 -725 5575 4461 632 288 40 25 chr2 233907372 233907699 -16780155 - L1M1 LINE L1 -4295 3270 2939 192 225 148 88 chr2 233908556 233908738 -16779116 + L2 LINE L2 3036 3228 -85 308 327 41 45 chr2 233909756 233909976 -16777878 - L1MEc LINE L1 -3387 3153 2935 313 270 97 61 chr2 233910300 233910578 -16777276 - L1MEc LINE L1 -3789 2751 2492 1340 185 17 20 chr2 233910608 233910910 -16776944 - L1MA4 LINE L1 -6 6294 5994 1310 137 34 0 chr2 233910940 233911173 -16776681 + L1MA4 LINE L1 5745 5985 -315 237 217 33 43 chr2 233911320 233911412 -16776442 - L1MEc LINE L1 -4592 1948 1858 280 317 75 33 chr2 233912311 233912431 -16775423 - L2 LINE L2 -2 3270 3146 2049 120 7 3 chr2 233912800 233913101 -16774753 + AluSg SINE Alu 1 302 -8 342 336 131 41 chr2 233913453 233913558 -16774296 + L2 LINE L2 2388 2482 -832 445 175 32 127 chr2 233913558 233913684 -16774170 - MER81 DNA DNA 0 114 1 342 336 131 41 chr2 233913684 233914119 -16773735 + L2 LINE L2 2482 2977 -337 1253 196 158 36 chr2 233914813 233915149 -16772705 + MLT1E1 LTR MaLR 39 415 -239 230 154 0 58 chr2 233915178 233915230 -16772624 - MER116 DNA Mariner -5 75 27 851 238 5 5 chr2 233915266 233915459 -16772395 - MLT1E3 LTR MaLR -6 618 426 372 346 63 78 chr2 233916900 233917374 -16770480 - MLT1K LTR MaLR -84 504 38 704 311 48 22 chr2 233917579 233917852 -16770002 + MLT1I LTR MaLR 128 407 -2 21 71 0 0 chr2 233917973 233918015 -16769839 + AT_rich Low_complexity Low_complexity 1 42 0 4738 191 28 3 chr2 233918024 233918932 -16768922 + L1M3f LINE L1 4 933 -4395 1115 166 42 26 chr2 233918931 233919253 -16768601 + L1M1 LINE L1 5177 5501 -743 * 4816 181 25 36 chr2 233919356 233920323 -16767531 - L1M3f LINE L1 -4371 957 2 375 150 100 0 chr2 233920329 233920409 -16767445 - L1M3 LINE L1 -361 5822 5735 289 320 25 25 chr2 233921273 233921395 -16766459 + L2 LINE L2 3192 3313 0 403 189 44 0 chr2 233921978 233922068 -16765786 + L1MB1 LINE L1 6075 6168 0 22 35 0 0 chr2 233923141 233923170 -16764684 + AT_rich Low_complexity Low_complexity 1 29 0 1414 115 0 56 chr2 233924396 233924648 -16763206 + L1MA5 LINE L1 6063 6300 0 222 91 0 0 chr2 233924850 233924883 -16762971 + (TG)n Simple_repeat Simple_repeat 2 34 0 341 308 157 29 chr2 233925166 233925338 -16762516 + MLT1J2 LTR MaLR 116 309 -141 882 167 16 38 chr2 233925739 233925925 -16761929 + MLT1A1 LTR MaLR 2 183 -182 216 175 0 0 chr2 233926028 233926068 -16761786 + (CA)n Simple_repeat Simple_repeat 1 40 0 530 206 110 19 chr2 233926146 233926301 -16761553 + MLT1A1 LTR MaLR 197 365 0 214 335 44 44 chr2 233927829 233927987 -16759867 - MER5A DNA MER1_type -9 180 23 21 0 0 0 chr2 233928052 233928073 -16759781 + AT_rich Low_complexity Low_complexity 1 21 0 2391 239 43 17 chr2 233928124 233928939 -16758915 - L1MDa LINE L1 -3678 2862 1860 350 287 107 16 chr2 233930302 233930424 -16757430 + L2 LINE L2 3132 3264 -8 1962 70 0 48 chr2 233932296 233932567 -16755287 - AluY SINE Alu -14 297 40 23 78 0 0 chr2 233932608 233932659 -16755195 + AT_rich Low_complexity Low_complexity 1 51 0 25 0 0 0 chr2 233932740 233932765 -16755089 + AT_rich Low_complexity Low_complexity 1 25 0 216 157 20 20 chr2 233932910 233932961 -16754893 + (TA)n Simple_repeat Simple_repeat 1 51 0 285 284 49 92 chr2 233933333 233933660 -16754194 + MLT1I LTR MaLR 97 409 0 333 0 0 0 chr2 233934657 233934694 -16753160 + (TG)n Simple_repeat Simple_repeat 2 38 0 1619 217 60 68 chr2 233934745 233935247 -16752607 + MLT1D LTR MaLR 7 504 -1 22 0 0 0 chr2 233935356 233935378 -16752476 + AT_rich Low_complexity Low_complexity 1 22 0 2172 119 3 6 chr2 233935380 233935692 -16752162 + AluSx SINE Alu 1 311 -1 324 357 40 0 chr2 233936924 233937050 -16750804 + MIR3 SINE MIR 14 144 -64 29 47 0 0 chr2 233937833 233937876 -16749978 + AT_rich Low_complexity Low_complexity 1 43 0 714 76 0 0 chr2 233937966 233938080 -16749774 - AluSc SINE Alu 0 303 190 717 168 0 8 chr2 233938219 233938344 -16749510 - AluSg SINE Alu -186 124 1 353 236 65 102 chr2 233938872 233939088 -16748766 - MLT1K LTR MaLR 0 588 381 271 264 81 95 chr2 233939801 233940085 -16747769 + L2 LINE L2 2692 2971 -343 511 290 33 62 chr2 233940406 233940630 -16747224 + L2 LINE L2 2843 3059 -254 324 0 0 0 chr2 233940630 233940666 -16747188 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 511 290 33 62 chr2 233940666 233940713 -16747141 + L2 LINE L2 3059 3106 -207 2070 154 30 13 chr2 233940728 233941123 -16746731 - L1MA5 LINE L1 -1 6299 5898 693 142 108 0 chr2 233941132 233941252 -16746602 - L1MA5 LINE L1 -540 5760 5628 381 316 98 11 chr2 233941252 233941426 -16746428 + L2 LINE L2 3121 3309 -4 235 333 32 11 chr2 233941470 233941563 -16746291 + MLT1K LTR MaLR 136 230 -358 1991 141 70 14 chr2 233941579 233941934 -16745920 + THE1C LTR MaLR 1 375 0 238 211 0 0 chr2 233942004 233942061 -16745793 + MLT1K LTR MaLR 365 421 -167 263 284 57 0 chr2 233942471 233942559 -16745295 - MIR3 SINE MIR -15 193 101 25 31 0 0 chr2 233942619 233942651 -16745203 + AT_rich Low_complexity Low_complexity 1 32 0 431 298 15 15 chr2 233943269 233943400 -16744454 - MIR SINE MIR -47 215 85 2767 7 3 0 chr2 233943456 233943766 -16744088 - AluYa5 SINE Alu 0 311 1 240 309 44 29 chr2 233943819 233943955 -16743899 - L2 LINE L2 -1 3312 3175 329 211 0 29 chr2 233944072 233944176 -16743678 + G-rich Low_complexity Low_complexity 2 102 0 1731 153 3 7 chr2 233944235 233944517 -16743337 + AluSx SINE Alu 1 281 -31 2080 222 38 44 chr2 233944542 233945195 -16742659 + L1M4 LINE L1 4300 4948 -1198 622 280 65 21 chr2 233945298 233945680 -16742174 - L1MEc LINE L1 -2576 3806 3408 358 227 35 66 chr2 233945730 233945942 -16741912 + L1MEc LINE L1 2128 2293 -3922 874 313 16 6 chr2 233945982 233946471 -16741383 + L1MEc LINE L1 2401 2894 -3321 1390 168 19 4 chr2 233946960 233947216 -16740638 - AluJb SINE Alu -30 282 23 1855 147 3 7 chr2 233947337 233947622 -16740232 + AluSx SINE Alu 1 284 -28 640 309 43 58 chr2 233947624 233948447 -16739407 - L1MEc LINE L1 -4545 1990 1038 23 0 0 0 chr2 233948537 233948560 -16739294 + AT_rich Low_complexity Low_complexity 1 23 0 447 387 74 26 chr2 233949039 233949416 -16738438 - L1MEc LINE L1 -5943 620 226 444 326 45 54 chr2 233949598 233949911 -16737943 + L1MEc LINE L1 1241 1550 -4846 887 269 92 68 chr2 233950088 233951938 -16735916 + L1MEc LINE L1 2163 4016 -2199 * 2385 197 48 53 chr2 233951928 233952553 -16735301 + L1MD1 LINE L1 5621 6242 0 449 274 145 12 chr2 233952546 233952801 -16735053 + L1MEc LINE L1 3943 4231 -1984 * 310 267 99 15 chr2 233952802 233952835 -16735019 + L1ME LINE L1 995 1024 -5181 186 103 0 0 chr2 233952835 233952864 -16734990 + (TA)n Simple_repeat Simple_repeat 2 30 0 310 267 99 15 chr2 233952864 233952961 -16734893 + L1ME LINE L1 1024 1136 -5069 4908 137 12 49 chr2 233952966 233954196 -16733658 + L1MA4A LINE L1 4943 6128 -175 1270 109 24 14 chr2 233954223 233954434 -16733420 + L1MA4A LINE L1 6086 6298 -5 591 216 72 6 chr2 233954568 233954749 -16733105 + L1ME LINE L1 1604 1796 -4600 197 324 27 14 chr2 233954933 233955007 -16732847 + L2 LINE L2 3193 3267 -5 216 0 0 0 chr2 233955899 233955923 -16731931 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 312 27 0 0 chr2 233955922 233955959 -16731895 + (CA)n Simple_repeat Simple_repeat 1 37 0 402 326 63 18 chr2 233956405 233956626 -16731228 - L2 LINE L2 -1 3312 3082 347 268 89 32 chr2 233956637 233956760 -16731094 + L2 LINE L2 3176 3305 -8 2506 79 44 0 chr2 233957197 233957537 -16730317 - THE1A LTR MaLR 0 355 1 21 57 0 0 chr2 233958039 233958074 -16729780 + AT_rich Low_complexity Low_complexity 1 35 0 711 226 30 18 chr2 233958700 233958868 -16728986 - MER63A DNA MER1_type -37 173 4 1997 125 0 11 chr2 233959188 233959500 -16728354 + AluSx SINE Alu 1 309 0 275 259 0 0 chr2 233960027 233960085 -16727769 - MER5A DNA MER1_type -125 64 7 225 108 0 0 chr2 233961412 233961449 -16726405 + (TA)n Simple_repeat Simple_repeat 1 37 0 1762 178 151 8 chr2 233961449 233961819 -16726035 - MSTA LTR MaLR -5 423 1 664 303 105 36 chr2 233961899 233962289 -16725565 + LTR33 LTR ERVL 1 417 -104 2244 93 7 16 chr2 233962296 233962651 -16725203 - AluSc SINE Alu 0 352 1 189 0 0 0 chr2 233962817 233962838 -16725016 + (T)n Simple_repeat Simple_repeat 1 21 0 1111 224 59 3 chr2 233963332 233963671 -16724183 - L1MB7 LINE L1 -19 6165 5751 2221 68 4 4 chr2 233964784 233965112 -16722742 + AluY SINE Alu 1 328 0 2046 190 97 25 chr2 233965220 233965705 -16722149 - MLT2B1 LTR ERVL 0 520 1 321 294 110 7 chr2 233966272 233966408 -16721446 + MIR SINE MIR 110 259 -3 418 303 108 9 chr2 233966631 233966862 -16720992 + L2 LINE L2 2067 2320 -994 250 261 7 78 chr2 233967382 233967480 -16720374 - HAL1b LINE L1 -471 877 790 13975 150 25 13 chr2 233967480 233969868 -16717986 - Tigger1 DNA MER2_type 0 2418 1 250 261 7 78 chr2 233969868 233969911 -16717943 - HAL1b LINE L1 -558 790 746 332 331 33 0 chr2 233970289 233970410 -16717444 - HAL1 LINE L1 -741 1766 1642 263 317 95 24 chr2 233970431 233970769 -16717085 - HAL1 LINE L1 -1344 1163 802 216 239 239 0 chr2 233971437 233971525 -16716329 - MIR SINE MIR 0 262 154 664 332 131 50 chr2 233971633 233972215 -16715639 + L2 LINE L2 1995 2679 -635 2345 134 6 16 chr2 233972215 233972581 -16715273 - THE1B LTR MaLR -2 362 1 664 332 131 50 chr2 233972581 233972905 -16714949 + L2 LINE L2 2679 2975 -339 2348 253 28 54 chr2 233974350 233974631 -16713223 + L1M4 LINE L1 5 292 -6250 2513 54 0 0 chr2 233974631 233974928 -16712926 - AluY SINE Alu -14 297 1 2348 253 28 54 chr2 233974928 233975366 -16712488 + L1M4 LINE L1 292 705 -5837 7127 252 53 48 chr2 233975482 233975917 -16711937 + L1M4 LINE L1 2205 2636 -4046 4367 112 8 62 chr2 233975917 233976647 -16711207 - LTR8 LTR ERV1 0 691 1 7127 252 53 48 chr2 233976647 233978972 -16708882 + L1M4 LINE L1 2636 4947 -1735 479 0 0 0 chr2 233978972 233979032 -16708822 + L1PA2 LINE L1 6094 6153 -2 216 0 0 0 chr2 233979040 233979064 -16708790 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7127 252 53 48 chr2 233979064 233979411 -16708443 + L1M4 LINE L1 4953 5297 -1385 1118 216 29 123 chr2 233979411 233979924 -16707930 - MLT1C LTR MaLR 0 467 3 7127 252 53 48 chr2 233979924 233980848 -16707006 + L1M4 LINE L1 5297 6279 -403 383 130 68 51 chr2 233980856 233981033 -16706821 + (TA)n Simple_repeat Simple_repeat 1 180 0 207 191 15 29 chr2 233981026 233981094 -16706760 + (TAAA)n Simple_repeat Simple_repeat 4 70 0 * 191 332 75 48 chr2 233982151 233982338 -16705516 - L2 LINE L2 -984 2330 2139 275 259 0 0 chr2 233982340 233982398 -16705456 + MER5A DNA MER1_type 7 64 -125 336 159 63 0 chr2 233983588 233983651 -16704203 + MER5A DNA MER1_type 89 155 -34 207 247 62 41 chr2 233983720 233983817 -16704037 - L2 LINE L2 -1222 2092 1994 2087 116 17 3 chr2 233984757 233984885 -16702969 + AluSc SINE Alu 1 126 -183 213 39 0 0 chr2 233984885 233984911 -16702943 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 2087 116 17 3 chr2 233984911 233985083 -16702771 + AluSc SINE Alu 126 305 -4 225 0 0 0 chr2 233985089 233985114 -16702740 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 374 268 38 71 chr2 233985118 233985301 -16702553 - L2 LINE L2 -32 3281 3105 620 290 99 8 chr2 233985434 233985696 -16702158 - MLT1J1 LTR MaLR -132 314 29 264 371 91 29 chr2 233985699 233985909 -16701945 - L2 LINE L2 -504 2810 2588 240 371 54 6 chr2 233987974 233988141 -16699713 + MIR3 SINE MIR 27 201 -7 880 259 9 40 chr2 233988712 233988936 -16698918 - MIR SINE MIR -25 237 21 1324 117 19 9 chr2 233988946 233989159 -16698695 - L1PB1 LINE L1 0 6151 5937 24 0 0 0 chr2 233989566 233989590 -16698264 + AT_rich Low_complexity Low_complexity 1 24 0 204 231 0 0 chr2 233989995 233990034 -16697820 + T-rich Low_complexity Low_complexity 3 41 0 1562 183 14 21 chr2 233990902 233991192 -16696662 + AluJo SINE Alu 2 289 -23 876 203 25 0 chr2 233991618 233991781 -16696073 - Tigger3(Golem) DNA MER2_type -4 3025 2859 508 81 47 0 chr2 233991779 233991865 -16695989 - Tigger3(Golem) DNA MER2_type -396 2633 2544 * 1003 222 0 32 chr2 233991865 233992081 -16695773 + AluJo SINE Alu 1 209 -103 270 146 146 0 chr2 233992192 233992240 -16695614 - Tigger3(Golem) DNA MER2_type -834 2195 2141 * 772 229 46 11 chr2 233992238 233992413 -16695441 - Tigger3(Golem) DNA MER2_type -2848 181 1 673 353 86 56 chr2 233993136 233993977 -16693877 + L2 LINE L2 970 1835 -1479 21 0 0 0 chr2 233994293 233994314 -16693540 + AT_rich Low_complexity Low_complexity 1 21 0 1116 226 99 41 chr2 233994725 233995070 -16692784 - MLT1A1 LTR MaLR 0 365 1 5825 212 56 44 chr2 233995074 233996451 -16691403 - MLT1A1-int LTR MaLR -4 1731 338 299 237 21 11 chr2 233996557 233996650 -16691204 + (TA)n Simple_repeat Simple_repeat 2 95 0 471 285 92 68 chr2 233996776 233997071 -16690783 + LTR33A LTR ERVL 214 515 -8 221 343 0 0 chr2 233997113 233997180 -16690674 - MIR SINE MIR -189 73 7 814 154 0 8 chr2 233998324 233998447 -16689407 + FLAM_C SINE Alu 2 123 -20 1776 195 55 37 chr2 233998739 233999196 -16688658 + MER31B LTR ERV1 2 466 0 2190 101 13 3 chr2 233999489 233999787 -16688067 - AluSx SINE Alu -11 301 1 198 0 0 0 chr2 233999828 233999850 -16688004 + (TATTG)n Simple_repeat Simple_repeat 2 23 0 1867 134 21 11 chr2 233999864 234000148 -16687706 - AluSx SINE Alu -25 287 1 26 30 0 0 chr2 234001785 234001818 -16686036 + AT_rich Low_complexity Low_complexity 1 33 0 27 49 0 0 chr2 234001903 234001944 -16685910 + AT_rich Low_complexity Low_complexity 1 41 0 4172 124 34 13 chr2 234003127 234003903 -16683951 + L1PB2 LINE L1 5136 5932 -219 1685 113 0 0 chr2 234004020 234004242 -16683612 + AluSg/x SINE Alu 75 296 -14 979 131 0 7 chr2 234004242 234004395 -16683459 + L1PB2 LINE L1 5964 6115 -36 2079 135 67 8 chr2 234004835 234005206 -16682648 + L1PB2 LINE L1 5540 5932 -219 1685 113 0 0 chr2 234005323 234005545 -16682309 + AluSg/x SINE Alu 77 298 -14 979 131 0 7 chr2 234005545 234005698 -16682156 + L1PB2 LINE L1 5964 6115 -36 666 274 132 0 chr2 234006315 234006505 -16681349 + MER58A DNA MER1_type 1 215 -9 28 0 0 0 chr2 234006931 234006959 -16680895 + AT_rich Low_complexity Low_complexity 1 28 0 211 26 0 53 chr2 234007051 234007089 -16680765 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 215 125 42 0 chr2 234007250 234007298 -16680556 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 433 246 41 25 chr2 234007585 234007707 -16680147 - L2 LINE L2 0 3313 3190 1001 291 72 46 chr2 234007729 234008388 -16679466 + L2 LINE L2 2506 3181 -132 202 222 0 0 chr2 234008823 234008859 -16678995 + (CATA)n Simple_repeat Simple_repeat 2 37 0 1313 190 72 29 chr2 234008892 234009171 -16678683 - AluJb SINE Alu -21 291 1 2178 139 50 6 chr2 234009254 234009613 -16678241 - THE1C LTR MaLR 0 375 1 10582 114 15 30 chr2 234009618 234011216 -16676638 - THE1C-int LTR MaLR -6 1574 1 2066 147 18 37 chr2 234011221 234011601 -16676253 - THE1C LTR MaLR -2 373 1 183 129 0 0 chr2 234012086 234012117 -16675737 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 318 312 114 30 chr2 234012230 234012432 -16675422 + MIR SINE MIR 37 255 -7 184 250 28 28 chr2 234012675 234012747 -16675107 + L2 LINE L2 2716 2787 -527 345 318 90 30 chr2 234012878 234013079 -16674775 + MIR SINE MIR 31 243 -19 1998 154 9 29 chr2 234013535 234013879 -16673975 - MER1B DNA MER1_type 0 337 1 737 228 17 52 chr2 234014289 234014579 -16673275 + AluSc SINE Alu 1 280 -19 2143 110 7 3 chr2 234014857 234015157 -16672697 + AluSc SINE Alu 1 301 -8 27 49 0 0 chr2 234015422 234015463 -16672391 + AT_rich Low_complexity Low_complexity 1 41 0 271 333 20 14 chr2 234015762 234015909 -16671945 - LTR16A LTR ERVL -246 204 57 601 102 252 8 chr2 234015996 234016123 -16671731 - MER4C LTR ERV1 -18 447 290 1289 141 134 53 chr2 234016207 234016527 -16671327 - MER4A LTR ERV1 -318 346 1 199 356 161 26 chr2 234016635 234017014 -16670840 + L2 LINE L2 299 728 -2586 1715 107 111 0 chr2 234017035 234017297 -16670557 + AluSg SINE Alu 1 291 -19 295 265 59 10 chr2 234017297 234017389 -16670465 + MER5A DNA MER1_type 9 108 -81 2332 111 10 46 chr2 234018843 234019231 -16668623 + THE1C LTR MaLR 1 374 -1 2345 138 8 0 chr2 234019724 234020085 -16667769 - THE1B LTR MaLR 0 364 1 227 272 54 22 chr2 234020085 234020177 -16667677 - MER5A DNA MER1_type -68 121 27 1598 129 59 11 chr2 234020451 234020723 -16667131 - L1PA16 LINE L1 -9 6157 5873 443 304 97 44 chr2 234021160 234021768 -16666086 + L1MC4a LINE L1 5272 5911 -1897 183 167 0 0 chr2 234022964 234023006 -16664848 + (TA)n Simple_repeat Simple_repeat 2 43 0 2281 211 40 28 chr2 234025640 234026586 -16661268 - L1MB8 LINE L1 -9 6169 5092 198 329 53 0 chr2 234026610 234026686 -16661168 - L2 LINE L2 -1 3312 3233 290 30 0 0 chr2 234026817 234026850 -16661004 + U2 snRNA snRNA 1 33 -155 1908 161 135 3 chr2 234027288 234027481 -16660373 - MSTA LTR MaLR 0 428 262 453 19 0 0 chr2 234027481 234027535 -16660319 + (GA)n Simple_repeat Simple_repeat 2 55 0 1908 161 135 3 chr2 234027535 234027719 -16660135 - MSTA LTR MaLR -166 262 1 13775 140 37 17 chr2 234027821 234029022 -16658832 + Tigger1 DNA MER2_type 1 1177 -1241 2088 145 0 0 chr2 234029022 234029325 -16658529 + AluSx SINE Alu 1 303 -9 13775 140 37 17 chr2 234029325 234030493 -16657361 + Tigger1 DNA MER2_type 1177 2417 -1 210 91 0 0 chr2 234031222 234031255 -16656599 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1472 223 12 42 chr2 234031391 234031800 -16656054 - MLT2C1 LTR ERVL 0 397 1 192 40 0 0 chr2 234032033 234032058 -16655796 + (A)n Simple_repeat Simple_repeat 1 25 0 867 304 125 22 chr2 234032608 234033239 -16654615 + L2 LINE L2 2624 3304 -9 1986 106 50 3 chr2 234035412 234035694 -16652160 + AluSg SINE Alu 1 295 -15 306 0 0 0 chr2 234035749 234035783 -16652071 + (CA)n Simple_repeat Simple_repeat 2 35 0 198 103 0 0 chr2 234036151 234036180 -16651674 + (TA)n Simple_repeat Simple_repeat 1 29 0 3905 161 13 28 chr2 234037180 234037650 -16650204 + MER50 LTR ERV1 9 466 -268 2086 131 0 0 chr2 234037650 234037956 -16649898 + AluSq SINE Alu 1 306 -7 3905 161 13 28 chr2 234037956 234038199 -16649655 + MER50 LTR ERV1 466 711 -23 562 279 139 42 chr2 234038585 234038922 -16648932 + LTR16C LTR ERVL 120 489 -2 23 33 0 0 chr2 234039368 234039398 -16648456 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 234039808 234039831 -16648023 + AT_rich Low_complexity Low_complexity 1 23 0 2097 106 0 0 chr2 234040286 234040561 -16647293 + AluSc SINE Alu 24 298 -11 21 0 0 0 chr2 234040827 234040848 -16647006 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 234041779 234041823 -16646031 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 234042044 234042066 -16645788 + AT_rich Low_complexity Low_complexity 1 22 0 291 327 10 10 chr2 234044126 234044227 -16643627 + L2 LINE L2 2644 2744 -570 306 341 16 23 chr2 234044680 234044809 -16643045 + MIR SINE MIR 9 136 -126 252 264 0 0 chr2 234044842 234044929 -16642925 + GA-rich Low_complexity Low_complexity 1 87 0 754 130 109 14 chr2 234046905 234047043 -16640811 - MER45A DNA AcHobo 0 178 28 183 80 0 0 chr2 234047522 234047547 -16640307 + (A)n Simple_repeat Simple_repeat 1 25 0 444 301 72 6 chr2 234048215 234048381 -16639473 - MIR SINE MIR -11 251 75 330 82 20 0 chr2 234050026 234050075 -16637779 - MADE1 DNA Mariner 0 80 31 180 182 73 18 chr2 234050671 234050726 -16637128 - MIR SINE MIR -189 73 16 2275 148 53 19 chr2 234051252 234051664 -16636190 - MSTC LTR MaLR -2 426 1 195 129 0 0 chr2 234051804 234051835 -16636019 + (CA)n Simple_repeat Simple_repeat 2 32 0 314 67 0 0 chr2 234051899 234051944 -16635910 - Alu SINE Alu -1 299 255 600 258 7 13 chr2 234051986 234052141 -16635713 + MIR SINE MIR 12 165 -97 449 255 64 21 chr2 234052167 234052308 -16635546 + MIR SINE MIR 116 262 0 243 0 0 0 chr2 234052455 234052482 -16635372 + (TG)n Simple_repeat Simple_repeat 1 27 0 26 0 0 0 chr2 234053209 234053235 -16634619 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr2 234053509 234053530 -16634324 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 234053821 234053842 -16634012 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 234054137 234054158 -16633696 + AT_rich Low_complexity Low_complexity 1 21 0 3606 195 31 38 chr2 234054379 234055163 -16632691 + L1MCa LINE L1 2 779 -5647 585 156 142 119 chr2 234055165 234055343 -16632511 + L1MC/D LINE L1 5292 5477 -856 489 106 0 85 chr2 234055343 234055437 -16632417 + L1MC2 LINE L1 6246 6331 -13 585 156 142 119 chr2 234055437 234055476 -16632378 + L1MC/D LINE L1 5477 5514 -819 222 96 39 19 chr2 234055537 234055589 -16632265 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 26 50 0 0 chr2 234055661 234055701 -16632153 + AT_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr2 234055878 234055902 -16631952 + AT_rich Low_complexity Low_complexity 1 24 0 244 294 49 29 chr2 234056103 234056205 -16631649 + L3b LINE CR1 1475 1578 -5 228 35 0 0 chr2 234056592 234056621 -16631233 + (CA)n Simple_repeat Simple_repeat 2 30 0 1426 161 100 5 chr2 234056780 234057132 -16630722 + MSTA LTR MaLR 1 428 0 635 216 8 16 chr2 234057230 234057355 -16630499 - FLAM_A SINE Alu -9 124 1 261 57 0 0 chr2 234057388 234057423 -16630431 + (TG)n Simple_repeat Simple_repeat 2 36 0 213 175 0 0 chr2 234058141 234058181 -16629673 + A-rich Low_complexity Low_complexity 2 41 0 1640 179 53 45 chr2 234058396 234058753 -16629101 - MLT1A2 LTR MaLR -14 360 1 554 355 19 9 chr2 234058821 234059036 -16628818 - MIR SINE MIR -21 241 25 3490 123 123 36 chr2 234059111 234059769 -16628085 + LTR62 LTR ERVK 1 715 -4 229 260 14 27 chr2 234059914 234059987 -16627867 + CT-rich Low_complexity Low_complexity 2 73 0 22 0 0 0 chr2 234060073 234060095 -16627759 + AT_rich Low_complexity Low_complexity 1 22 0 2025 138 20 0 chr2 234060110 234060444 -16627410 - AluSq SINE Alu 0 313 2 1821 121 192 16 chr2 234062378 234062742 -16625112 + MSTA LTR MaLR 1 428 0 211 347 153 29 chr2 234063178 234063564 -16624290 + L2 LINE L2 2125 2558 -756 680 215 1 31 chr2 234063679 234063860 -16623994 + MLT1D LTR MaLR 20 168 -337 282 247 118 0 chr2 234063916 234064009 -16623845 - HAL1 LINE L1 -2111 396 293 407 273 55 38 chr2 234064065 234064248 -16623606 - HAL1 LINE L1 -2318 189 4 23 0 0 0 chr2 234064538 234064561 -16623293 + AT_rich Low_complexity Low_complexity 1 23 0 284 186 24 8 chr2 234064703 234064827 -16623027 + (TA)n Simple_repeat Simple_repeat 1 126 0 324 0 0 0 chr2 234064828 234064864 -16622990 + (CA)n Simple_repeat Simple_repeat 2 37 0 372 311 36 50 chr2 234066639 234066916 -16620938 + L3 LINE CR1 1289 1561 -16 4959 187 78 7 chr2 234067082 234068035 -16619819 + LTR28 LTR ERV1 1 1020 0 342 161 0 0 chr2 234070561 234070617 -16617237 - MLT2B1 LTR ERVL -462 58 3 384 184 0 0 chr2 234070684 234070787 -16617067 + (TA)n Simple_repeat Simple_repeat 2 104 0 753 308 65 8 chr2 234071140 234071491 -16616363 + LTR16A LTR ERVL 2 372 -78 262 316 32 32 chr2 234072267 234072362 -16615492 - MIR SINE MIR -67 141 47 234 306 0 0 chr2 234072471 234072533 -16615321 - L2 LINE L2 -18 3295 3234 666 252 52 57 chr2 234073243 234073473 -16614381 + MIR SINE MIR 13 241 -21 25 31 0 0 chr2 234073480 234073512 -16614342 + AT_rich Low_complexity Low_complexity 1 32 0 348 337 133 11 chr2 234073770 234073951 -16613903 - MIR SINE MIR -59 203 1 23 0 0 0 chr2 234075843 234075866 -16611988 + AT_rich Low_complexity Low_complexity 1 23 0 209 268 0 0 chr2 234076986 234077027 -16610827 + (CA)n Simple_repeat Simple_repeat 2 42 0 234 0 0 0 chr2 234077597 234077623 -16610231 + (A)n Simple_repeat Simple_repeat 1 26 0 250 372 13 0 chr2 234078795 234078873 -16608981 - MIR SINE MIR -149 113 35 3189 67 17 73 chr2 234079075 234079555 -16608299 - MLT2A2 LTR ERVL 0 453 1 1858 139 43 0 chr2 234079606 234079908 -16607946 - L1PA16 LINE L1 -9 6157 5843 201 274 0 0 chr2 234079927 234080000 -16607854 + GA-rich Low_complexity Low_complexity 2 74 0 890 233 26 34 chr2 234082356 234082775 -16605079 + LTR40b LTR ERVL 1 462 0 21 0 0 0 chr2 234082827 234082848 -16605006 + AT_rich Low_complexity Low_complexity 1 21 0 1681 171 78 6 chr2 234083085 234083418 -16604436 + MLT1B LTR MaLR 32 388 -2 349 279 115 0 chr2 234084059 234084181 -16603673 + MIR SINE MIR 122 257 -5 23 0 0 0 chr2 234084510 234084533 -16603321 + AT_rich Low_complexity Low_complexity 1 23 0 445 342 82 34 chr2 234085581 234085850 -16602004 + L2 LINE L2 3009 3290 -23 198 294 0 0 chr2 234086062 234086113 -16601741 - L2 LINE L2 -5 3267 3217 371 242 0 40 chr2 234087016 234087115 -16600739 - L1MC4 LINE L1 -1334 6708 6614 204 284 9 35 chr2 234087315 234087431 -16600423 + A-rich Low_complexity Low_complexity 2 114 0 267 200 40 80 chr2 234087788 234087888 -16599966 + L1ME LINE L1 5384 5479 -691 2101 141 8 42 chr2 234088220 234088597 -16599257 - THE1B LTR MaLR 0 364 1 10373 111 26 13 chr2 234088597 234088665 -16599189 - THE1B-int LTR MaLR 0 1580 1514 2443 91 0 0 chr2 234088665 234088973 -16598881 - AluY SINE Alu -3 308 1 10373 111 26 13 chr2 234088973 234090463 -16597391 - THE1B-int LTR MaLR -66 1514 1 2151 137 11 40 chr2 234090463 234090836 -16597018 - THE1B LTR MaLR 0 364 3 398 357 88 15 chr2 234090896 234091235 -16596619 - L2 LINE L2 -135 3178 2815 6438 212 90 20 chr2 234092083 234093657 -16594197 - MER52A LTR ERV1 0 1755 1 249 83 0 0 chr2 234093976 234094012 -16593842 + (TC)n Simple_repeat Simple_repeat 1 36 0 578 239 81 29 chr2 234094015 234094362 -16593492 - L1MDa LINE L1 -2896 3644 3280 552 281 87 56 chr2 234094382 234094738 -16593116 - L1MDa LINE L1 -3319 3221 2855 726 249 52 21 chr2 234094834 234095216 -16592638 - L1MDa LINE L1 -3709 2848 2444 1230 274 46 60 chr2 234095220 234095307 -16592547 + L1ME1 LINE L1 3064 3151 -2995 2113 124 7 10 chr2 234095307 234095605 -16592249 - AluSq SINE Alu -16 297 1 1230 274 46 60 chr2 234095605 234096317 -16591537 + L1ME1 LINE L1 3151 3852 -2294 851 353 38 32 chr2 234096341 234096925 -16590929 + L1PA13 LINE L1 788 1374 -6200 256 340 10 0 chr2 234097061 234097158 -16590696 + L1PA13 LINE L1 2085 2182 -5399 11568 249 23 12 chr2 234097450 234099814 -16588040 + L1PA13 LINE L1 2247 4687 -2897 198 103 0 0 chr2 234099814 234099843 -16588011 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 11568 249 23 12 chr2 234099843 234101618 -16586236 + L1PA13 LINE L1 4687 6440 -1144 282 143 0 71 chr2 234101646 234101716 -16586138 + L1PA16 LINE L1 6099 6163 -3 2236 236 102 64 chr2 234101718 234102157 -16585697 + L1ME1 LINE L1 3859 4280 -1886 331 87 0 0 chr2 234102157 234102203 -16585651 - MADE1 DNA Mariner 0 80 35 2236 236 102 64 chr2 234102203 234103943 -16583911 + L1ME1 LINE L1 4280 6166 0 1692 205 45 8 chr2 234104031 234104407 -16583447 - MLT1B LTR MaLR 0 390 1 1260 159 3 115 chr2 234105743 234106108 -16581746 + MER33 DNA MER1_type 1 324 0 236 228 0 13 chr2 234106635 234106714 -16581140 + (TA)n Simple_repeat Simple_repeat 2 79 0 252 167 0 0 chr2 234107500 234107548 -16580306 + (TA)n Simple_repeat Simple_repeat 2 49 0 4500 187 32 26 chr2 234107548 234108610 -16579244 - L1M2 LINE L1 -746 5400 4395 225 0 0 0 chr2 234108610 234108635 -16579219 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 4500 187 32 26 chr2 234108635 234108834 -16579020 - L1M2 LINE L1 -1751 4395 4199 2275 185 17 0 chr2 234108829 234109251 -16578603 + L1MA9 LINE L1 5487 5915 -397 * 2350 196 51 18 chr2 234109257 234109804 -16578050 + L1MA10 LINE L1 5770 6334 0 2119 121 0 0 chr2 234109830 234110155 -16577699 - AluSx SINE Alu 0 325 1 2906 87 15 3 chr2 234110250 234110639 -16577215 + MLT2A2 LTR ERVL 1 394 -59 316 51 14 5 chr2 234110968 234110979 -16576875 + MLT2A1 LTR ERVL 361 370 -74 282 29 0 0 chr2 234110979 234111014 -16576840 + (TA)n Simple_repeat Simple_repeat 1 35 0 316 51 14 5 chr2 234111014 234111054 -16576800 + MLT2A1 LTR ERVL 370 444 0 22 35 0 0 chr2 234112189 234112218 -16575636 + AT_rich Low_complexity Low_complexity 1 29 0 719 320 74 26 chr2 234112640 234113209 -16574645 - L1MEd LINE L1 -5078 1041 446 42993 45 4 2 chr2 234113403 234119543 -16568311 + L1PA4 LINE L1 2 6155 0 566 242 173 90 chr2 234119613 234119902 -16567952 - MLT2B1 LTR ERVL -58 462 150 270 56 0 0 chr2 234120007 234120043 -16567811 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 1803 171 3 7 chr2 234120062 234120349 -16567505 - AluJo SINE Alu -26 286 1 181 383 0 0 chr2 234120401 234120461 -16567393 + L2 LINE L2 3201 3260 -12 * 229 158 0 0 chr2 234120429 234120467 -16567387 + MIR SINE MIR 225 262 0 2087 110 35 0 chr2 234120884 234121166 -16566688 - AluSq SINE Alu -19 294 3 772 178 20 0 chr2 234121191 234121337 -16566517 - L1PA13 LINE L1 -15 6148 6000 252 329 82 0 chr2 234121370 234121455 -16566399 - MIR SINE MIR -143 119 28 192 309 73 0 chr2 234122220 234122288 -16565566 - L2 LINE L2 0 3272 3200 646 327 68 31 chr2 234122515 234122867 -16564987 + L2 LINE L2 2943 3307 -6 764 333 62 9 chr2 234122916 234123367 -16564487 - MLT1L LTR MaLR -4 611 137 250 326 98 13 chr2 234123363 234123599 -16564255 + MER112 DNA MER1_type 5 260 0 * 208 116 0 47 chr2 234123726 234123769 -16564085 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 26 0 0 0 chr2 234124467 234124493 -16563361 + AT_rich Low_complexity Low_complexity 1 26 0 586 273 19 68 chr2 234125859 234125930 -16561924 + MIR3 SINE MIR 10 83 -125 2064 153 47 47 chr2 234125930 234126375 -16561479 - MER65A LTR ERV1 0 445 1 586 273 19 68 chr2 234126375 234126508 -16561346 + MIR3 SINE MIR 83 204 -4 1568 146 108 24 chr2 234128056 234128344 -16559510 + AluSx SINE Alu 1 312 0 190 333 42 0 chr2 234128629 234128701 -16559153 + MIR SINE MIR 36 110 -98 337 94 16 16 chr2 234129263 234129327 -16558527 + (TC)n Simple_repeat Simple_repeat 1 64 0 382 236 56 68 chr2 234129674 234129984 -16557870 - MLT1J2 LTR MaLR 0 450 92 1696 168 18 11 chr2 234129998 234130284 -16557570 + AluJo SINE Alu 1 288 -24 962 291 131 35 chr2 234130485 234130869 -16556985 - MLT1F1 LTR MaLR 0 567 127 2423 169 25 52 chr2 234130869 234131347 -16556507 + LTR24 LTR ERV1 1 465 -2 962 291 131 35 chr2 234131347 234131465 -16556389 - MLT1F1 LTR MaLR -440 127 22 21 57 0 0 chr2 234131758 234131793 -16556061 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr2 234131987 234132022 -16555832 + AT_rich Low_complexity Low_complexity 1 35 0 639 175 35 64 chr2 234132024 234132069 -16555785 - L1MB3 LINE L1 0 6183 6138 2288 96 3 7 chr2 234132069 234132372 -16555482 - AluSq SINE Alu -9 304 3 639 175 35 64 chr2 234132372 234132497 -16555357 - L1MB3 LINE L1 -45 6138 6018 525 262 136 48 chr2 234133515 234133847 -16554007 + MLT1J1 LTR MaLR 65 425 -21 21 36 0 0 chr2 234133968 234133996 -16553858 + AT_rich Low_complexity Low_complexity 1 28 0 240 344 0 0 chr2 234134753 234134817 -16553037 - L2 LINE L2 -93 3179 3116 219 241 196 36 chr2 234135002 234135114 -16552740 - MIR SINE MIR -6 256 127 203 356 106 23 chr2 234135291 234135423 -16552431 - MIR SINE MIR -108 154 12 459 98 98 0 chr2 234137171 234137253 -16550601 - L1MA2 LINE L1 0 6304 6215 833 168 7 0 chr2 234137256 234137399 -16550455 - FRAM SINE Alu -2 174 31 412 73 0 0 chr2 234137489 234137544 -16550310 - MLT2A1 LTR ERVL 0 444 390 355 289 0 0 chr2 234137545 234137635 -16550219 - L1MC4 LINE L1 -1339 6703 6614 3002 79 28 0 chr2 234137655 234138048 -16549806 - MLT2A1 LTR ERVL -40 404 1 1280 246 38 12 chr2 234139080 234139425 -16548429 + MLT1A1 LTR MaLR 11 364 -1 2250 107 0 3 chr2 234139467 234139767 -16548087 - AluSg SINE Alu -11 299 1 279 279 141 62 chr2 234139984 234140109 -16547745 - L1ME4a LINE L1 -197 5924 5810 2291 64 14 4 chr2 234140109 234140389 -16547465 - AluSc SINE Alu -26 283 1 279 279 141 62 chr2 234140389 234140632 -16547222 - L1ME4a LINE L1 -311 5810 5527 1980 261 75 29 chr2 234140916 234142202 -16545652 + L1ME2 LINE L1 4726 6058 -106 297 287 87 31 chr2 234142321 234142516 -16545338 + L1MC4 LINE L1 7836 8041 -1 2171 95 3 7 chr2 234142653 234142971 -16544883 + AluSg SINE Alu 1 317 0 21 36 0 0 chr2 234143343 234143371 -16544483 + AT_rich Low_complexity Low_complexity 1 28 0 1895 57 0 4 chr2 234143694 234143923 -16543931 + AluY SINE Alu 1 228 -83 186 103 0 0 chr2 234143933 234143962 -16543892 + (A)n Simple_repeat Simple_repeat 1 29 0 189 0 0 0 chr2 234144000 234144021 -16543833 + (A)n Simple_repeat Simple_repeat 1 21 0 213 39 0 0 chr2 234144021 234144047 -16543807 + (TCTA)n Simple_repeat Simple_repeat 2 27 0 264 281 60 68 chr2 234144281 234144450 -16543404 - L1MEd LINE L1 -4892 1227 1059 817 196 96 0 chr2 234144450 234144649 -16543205 + MER20 DNA MER1_type 1 218 -1 264 281 60 68 chr2 234144649 234144728 -16543126 - L1MEd LINE L1 -5060 1059 981 26 30 0 0 chr2 234144750 234144783 -16543071 + AT_rich Low_complexity Low_complexity 1 33 0 37 76 0 0 chr2 234145855 234145934 -16541920 + AT_rich Low_complexity Low_complexity 1 79 0 30 45 0 0 chr2 234145963 234146007 -16541847 + AT_rich Low_complexity Low_complexity 1 44 0 438 325 71 47 chr2 234146340 234146746 -16541108 - L1MEd LINE L1 -4764 1546 1083 1960 17 12 12 chr2 234146746 234146986 -16540868 - AluYa5 SINE Alu 0 311 72 438 325 71 47 chr2 234146986 234147164 -16540690 - L1MEd LINE L1 -5227 1083 911 243 0 0 0 chr2 234147285 234147302 -16540552 + (CA)n Simple_repeat Simple_repeat 1 44 0 243 0 0 0 chr2 234147302 234147329 -16540525 + (CA)n Simple_repeat Simple_repeat 2 28 0 607 272 62 25 chr2 234149740 234149983 -16537871 + Charlie4a DNA MER1_type 73 324 -184 711 143 82 39 chr2 234150026 234150208 -16537646 + Charlie4a DNA MER1_type 313 502 -6 2822 164 78 7 chr2 234151615 234152156 -16535698 - L1PA15 LINE L1 0 6165 5587 6399 195 8 24 chr2 234152156 234153556 -16534298 + L1P LINE L1 3917 5293 -858 26 30 0 0 chr2 234154530 234154563 -16533291 + AT_rich Low_complexity Low_complexity 1 33 0 2133 135 0 0 chr2 234154570 234154873 -16532981 + AluSx SINE Alu 1 303 -9 1324 204 30 56 chr2 234155118 234155456 -16532398 + MER58B DNA MER1_type 1 329 -12 1927 140 14 10 chr2 234155636 234155929 -16531925 - AluSx SINE Alu -18 294 1 1231 140 0 23 chr2 234157577 234157791 -16530063 - L1PA16 LINE L1 0 6166 5958 22 56 0 0 chr2 234158016 234158052 -16529802 + AT_rich Low_complexity Low_complexity 1 36 0 2130 127 3 0 chr2 234158078 234158369 -16529485 + AluSx SINE Alu 1 292 -20 246 325 89 8 chr2 234158389 234158512 -16529342 - MLT1J2 LTR MaLR -317 133 1 522 103 0 0 chr2 234158982 234159060 -16528794 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 318 106 0 0 chr2 234160103 234160150 -16527704 + (A)n Simple_repeat Simple_repeat 1 47 0 436 326 78 29 chr2 234160175 234160417 -16527437 + MIR SINE MIR 9 262 0 446 363 113 39 chr2 234160978 234161651 -16526203 + L2 LINE L2 2035 2757 -557 330 351 145 12 chr2 234161866 234162108 -16525746 + L2 LINE L2 1773 2046 -1268 267 362 15 34 chr2 234162371 234162636 -16525218 + L2 LINE L2 2135 2394 -920 886 236 94 26 chr2 234212834 234213067 -16474787 + MIR SINE MIR 14 262 0 248 324 88 29 chr2 234214085 234214187 -16473667 - MIR SINE MIR -133 129 22 369 0 0 0 chr2 234214405 234214446 -16473408 + (TG)n Simple_repeat Simple_repeat 2 42 0 2245 121 0 0 chr2 234214446 234214752 -16473102 - AluSx SINE Alu -6 306 1 499 204 87 0 chr2 234215129 234215232 -16472622 + FRAM SINE Alu 54 165 -11 320 217 0 12 chr2 234215233 234215316 -16472538 + (TATATG)n Simple_repeat Simple_repeat 1 82 0 319 235 160 8 chr2 234215407 234215526 -16472328 + L1ME LINE L1 5701 5837 -284 1118 214 43 14 chr2 234215766 234216067 -16471787 - MLT1B LTR MaLR -106 361 8 340 315 59 5 chr2 234216309 234216531 -16471323 - MLT1L LTR MaLR -22 593 360 2190 135 52 9 chr2 234216577 234216924 -16470930 + THE1B LTR MaLR 1 362 -2 337 261 11 11 chr2 234217603 234217691 -16470163 + MER20 DNA MER1_type 42 129 -90 415 181 129 0 chr2 234217791 234217907 -16469947 + L1MC3 LINE L1 6879 7009 -776 410 165 38 0 chr2 234217909 234217988 -16469866 - L1MC3 LINE L1 -673 7112 7031 234 0 0 0 chr2 234217997 234218023 -16469831 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1286 190 8 0 chr2 234218026 234218279 -16469575 - L1MC3 LINE L1 -330 7455 7201 1918 180 5 3 chr2 234218285 234218663 -16469191 + L1MC3 LINE L1 7405 7783 -2 2317 106 3 0 chr2 234220335 234220636 -16467218 + AluSp SINE Alu 1 302 -11 3842 59 36 42 chr2 234220652 234221703 -16466151 - MER11A LTR ERVK -1 1265 1 574 321 116 44 chr2 234221708 234222191 -16465663 + L2 LINE L2 2516 3069 -244 1710 93 62 0 chr2 234222191 234222449 -16465405 - L1PB1 LINE L1 0 6151 5878 574 321 116 44 chr2 234222449 234222713 -16465141 + L2 LINE L2 3069 3313 0 397 307 57 41 chr2 234223260 234223652 -16464202 - L2 LINE L2 -1002 2312 1852 235 333 71 16 chr2 234223914 234224040 -16463814 + L2 LINE L2 2959 3091 -181 185 275 0 0 chr2 234227819 234227859 -16459995 + L2 LINE L2 3147 3186 -86 830 219 16 6 chr2 234229547 234229730 -16458124 - MIR SINE MIR -77 185 1 360 43 0 0 chr2 234230070 234230116 -16457738 + (TG)n Simple_repeat Simple_repeat 1 46 0 254 307 73 44 chr2 234230555 234230692 -16457162 - MIR SINE MIR -105 157 17 1470 134 0 0 chr2 234231071 234231272 -16456582 + AluSq SINE Alu 19 219 -94 4020 195 30 20 chr2 234231295 234232813 -16455041 + L1MB3 LINE L1 4326 5854 -329 271 113 387 0 chr2 234233061 234233123 -16454731 - AluSc SINE Alu -3 296 211 255 402 74 8 chr2 234233285 234233407 -16454447 + L2 LINE L2 3141 3270 -2 1926 120 45 18 chr2 234233447 234233804 -16454050 - L1MA4 LINE L1 -239 5933 5646 1980 135 0 7 chr2 234234332 234234621 -16453233 + AluSg SINE Alu 1 287 -23 414 0 0 0 chr2 234234621 234234667 -16453187 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 478 374 177 25 chr2 234235457 234235684 -16452170 - L2 LINE L2 -345 2969 2778 1898 135 66 36 chr2 234235684 234236048 -16451806 - THE1C LTR MaLR 0 375 1 478 374 177 25 chr2 234236048 234236838 -16451016 - L2 LINE L2 -536 2778 1798 2215 108 6 25 chr2 234237879 234238194 -16449660 - AluSx SINE Alu -1 311 3 21 36 0 0 chr2 234238426 234238454 -16449400 + AT_rich Low_complexity Low_complexity 1 28 0 439 276 14 21 chr2 234238594 234238739 -16449115 - L3b LINE CR1 -189 1394 1251 1283 276 91 10 chr2 234241369 234242031 -16445823 - L2 LINE L2 0 3313 2603 516 267 36 30 chr2 234242075 234242240 -16445614 - L2 LINE L2 -31 3282 3117 278 276 40 19 chr2 234242258 234242413 -16445441 + L1ME LINE L1 5710 5870 -300 830 150 7 0 chr2 234242687 234242840 -16445014 + GA-rich Low_complexity Low_complexity 1 154 0 613 273 47 17 chr2 234242941 234243221 -16444633 - L2 LINE L2 -247 3066 2694 291 249 105 33 chr2 234243247 234243428 -16444426 - MER20 DNA MER1_type 0 219 26 3769 166 15 21 chr2 234247408 234248137 -16439717 - L1MB2 LINE L1 -139 6032 5308 1150 235 70 38 chr2 234248798 234249215 -16438639 - LTR16A1 LTR ERVL -16 441 12 257 322 20 7 chr2 234250996 234251148 -16436706 + MER103 DNA DNA 8 161 -5 23 54 0 0 chr2 234251507 234251544 -16436310 + AT_rich Low_complexity Low_complexity 1 37 0 1185 214 92 116 chr2 234252832 234253741 -16434113 - MLT1E2 LTR MaLR -26 600 80 251 288 113 44 chr2 234253241 234253316 -16434538 - MLT2C1 LTR ERVL -183 214 146 * 2046 130 27 32 chr2 234253316 234253692 -16434162 - THE1C LTR MaLR -1 374 1 251 288 113 44 chr2 234253692 234253776 -16434078 - MLT2C1 LTR ERVL -251 146 44 195 264 0 121 chr2 234253905 234253996 -16433858 - L2 LINE L2 0 3272 3193 534 214 32 45 chr2 234254002 234254156 -16433698 + MER3 DNA MER1_type 42 193 -16 236 219 151 0 chr2 234254140 234254213 -16433641 - MER3 DNA MER1_type -125 84 1 * 938 246 9 9 chr2 234254268 234254488 -16433366 - MER58A DNA MER1_type -2 222 3 1105 168 84 89 chr2 234254627 234255019 -16432835 - MLT1B LTR MaLR 0 390 1 312 326 83 8 chr2 234255035 234255167 -16432687 - MER5B DNA MER1_type 0 178 37 2503 118 6 3 chr2 234255168 234255531 -16432323 - THE1B LTR MaLR 0 364 1 3934 138 9 6 chr2 234255535 234256192 -16431662 - THE1B-int LTR MaLR -4 1576 918 308 280 109 33 chr2 234256848 234257059 -16430795 + MIR SINE MIR 34 260 -2 22 35 0 0 chr2 234259010 234259039 -16428815 + AT_rich Low_complexity Low_complexity 1 29 0 414 280 42 35 chr2 234259695 234259838 -16428016 - MIR3 SINE MIR -24 184 41 260 323 21 21 chr2 234259917 234260010 -16427844 - MIR SINE MIR -62 146 54 428 260 0 32 chr2 234260139 234260262 -16427592 - MER103 DNA DNA -46 120 2 260 367 60 27 chr2 234260332 234260482 -16427372 + MIR3 SINE MIR 31 185 -23 239 192 0 19 chr2 234260527 234260579 -16427275 + (CATA)n Simple_repeat Simple_repeat 2 52 0 472 228 110 15 chr2 234260697 234260833 -16427021 - MLT1J2 LTR MaLR -296 154 6 265 316 35 52 chr2 234261035 234261125 -16426729 + MIR SINE MIR 50 137 -125 2238 112 20 0 chr2 234261125 234261430 -16426424 + AluSx SINE Alu 1 311 -1 265 316 35 52 chr2 234261430 234261513 -16426341 + MIR SINE MIR 137 220 -42 290 274 20 29 chr2 234261716 234261818 -16426036 + MIR SINE MIR 162 262 0 443 305 43 7 chr2 234261835 234261976 -16425878 - MIR SINE MIR -19 243 98 306 0 0 0 chr2 234262453 234262487 -16425367 + (TG)n Simple_repeat Simple_repeat 2 35 0 220 194 28 28 chr2 234263071 234263143 -16424711 + (CATATA)n Simple_repeat Simple_repeat 3 74 0 207 0 0 0 chr2 234263337 234263360 -16424494 + (A)n Simple_repeat Simple_repeat 1 23 0 2338 93 6 3 chr2 234264191 234264502 -16423352 + AluSx SINE Alu 1 312 0 411 321 6 124 chr2 234266117 234266463 -16421391 - L2 LINE L2 0 3272 2968 440 290 175 18 chr2 234266719 234267005 -16420849 - MLT1H LTR MaLR -16 533 203 336 64 0 0 chr2 234267574 234267621 -16420233 + (CA)n Simple_repeat Simple_repeat 2 48 0 238 304 223 0 chr2 234267641 234267753 -16420101 - MIR SINE MIR -108 154 18 261 0 0 0 chr2 234268256 234268285 -16419569 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 332 300 200 0 chr2 234268289 234268389 -16419465 - L2 LINE L2 -17 3255 3136 409 300 203 13 chr2 234269559 234269796 -16418058 + LTR33 LTR ERVL 6 287 -234 2192 106 3 3 chr2 234269925 234270227 -16417627 + AluSc SINE Alu 1 302 -7 680 241 55 41 chr2 234270668 234270789 -16417065 + MER58A DNA MER1_type 2 129 -2291 2214 108 0 7 chr2 234270789 234271094 -16416760 - AluSx SINE Alu -9 303 1 680 241 55 41 chr2 234271094 234271192 -16416662 + MER58A DNA MER1_type 129 224 0 750 296 43 81 chr2 234271892 234272376 -16415478 + MLT1K LTR MaLR 123 588 0 247 324 79 22 chr2 234272605 234272744 -16415110 - L2 LINE L2 -3 3310 3164 21 0 0 0 chr2 234273966 234273987 -16413867 + AT_rich Low_complexity Low_complexity 1 21 0 407 286 112 14 chr2 234274662 234274956 -16412898 - HAL1 LINE L1 -17 2490 2168 386 306 87 77 chr2 234274982 234275348 -16412506 - HAL1 LINE L1 -443 2064 1695 259 366 32 16 chr2 234275348 234275471 -16412383 + MER5C DNA MER1_type 1 125 -199 7874 196 47 8 chr2 234276797 234278641 -16409213 - L1 LINE L1 -1417 4729 2813 215 137 0 82 chr2 234278733 234278806 -16409048 + MER5C DNA MER1_type 185 251 -73 763 251 62 70 chr2 234278894 234279252 -16408602 - HAL1 LINE L1 -837 1670 1316 233 336 0 45 chr2 234279267 234279377 -16408477 - HAL1 LINE L1 -1603 904 800 508 273 35 41 chr2 234279386 234280310 -16407544 + L1MC/D LINE L1 3952 4985 -1161 297 265 10 61 chr2 234280401 234280499 -16407355 - MIR SINE MIR -50 212 120 280 175 206 0 chr2 234281469 234281532 -16406322 - MER102a DNA MER1_type -6 324 249 318 268 222 29 chr2 234281857 234282100 -16405754 - L2 LINE L2 -11 3302 3013 317 222 37 56 chr2 234282228 234282336 -16405518 - MER103 DNA DNA -59 107 2 416 310 58 44 chr2 234282764 234283098 -16404756 + L1MC/D LINE L1 5123 5467 -743 210 143 0 0 chr2 234283174 234283209 -16404645 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 343 268 100 29 chr2 234283534 234283773 -16404081 - L1M4 LINE L1 -1342 4804 4549 21 57 0 0 chr2 234283919 234283954 -16403900 + AT_rich Low_complexity Low_complexity 1 35 0 232 252 102 54 chr2 234284278 234284425 -16403429 - L1M4 LINE L1 -2202 3944 3791 211 172 17 17 chr2 234285744 234285802 -16402052 + (TATATG)n Simple_repeat Simple_repeat 5 62 0 513 32 0 0 chr2 234288312 234288375 -16399479 + (TG)n Simple_repeat Simple_repeat 2 64 0 808 250 60 14 chr2 234288757 234288973 -16398881 + MIR SINE MIR 35 260 -2 758 320 25 20 chr2 234290876 234291120 -16396734 - MIR SINE MIR -11 251 7 366 286 50 25 chr2 234291219 234291380 -16396474 - L2 LINE L2 -1 3312 3148 2469 71 0 0 chr2 234291769 234292066 -16395788 - AluY SINE Alu -14 297 1 231 343 0 0 chr2 234292074 234292144 -16395710 + MIR3 SINE MIR 129 198 -10 845 230 56 33 chr2 234292560 234292773 -16395081 + MER20 DNA MER1_type 2 219 0 2946 109 100 0 chr2 234292883 234293334 -16394520 - THE1B-int LTR MaLR -1082 498 3 2458 125 8 3 chr2 234293338 234293698 -16394156 - THE1B LTR MaLR -2 362 1 2061 116 7 7 chr2 234294697 234294990 -16392864 + AluSx SINE Alu 1 293 -19 5215 181 15 4 chr2 234295052 234296089 -16391765 - L1MD1 LINE L1 -8 6628 5580 242 292 0 0 chr2 234296098 234296163 -16391691 + L1M4 LINE L1 3967 4031 -2115 * 1420 263 59 23 chr2 234296151 234296813 -16391041 - L1MD1 LINE L1 -2590 3950 3265 1639 192 83 3 chr2 234296836 234297174 -16390680 + MLT1A1 LTR MaLR 1 365 0 252 200 55 0 chr2 234297211 234297266 -16390588 + (TATATG)n Simple_repeat Simple_repeat 5 62 0 785 154 160 0 chr2 234297269 234297457 -16390397 - L1MD1 LINE L1 -4206 2334 2117 297 0 0 0 chr2 234297498 234297531 -16390323 + (CA)n Simple_repeat Simple_repeat 2 34 0 587 247 31 70 chr2 234298028 234298255 -16389599 - MER20 DNA MER1_type -1 218 1 905 114 0 0 chr2 234298889 234299021 -16388833 + AluSg/x SINE Alu 179 310 -2 1155 240 57 85 chr2 234302501 234302971 -16384883 - MLT1C LTR MaLR 0 467 11 504 200 78 39 chr2 234303522 234303702 -16384152 - MER53 DNA DNA -2 187 1 258 245 0 0 chr2 234303750 234303848 -16384006 + GA-rich Low_complexity Low_complexity 1 98 0 180 0 0 0 chr2 234304373 234304393 -16383461 + (TC)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr2 234304392 234304412 -16383442 + (CA)n Simple_repeat Simple_repeat 1 20 0 369 299 162 10 chr2 234304430 234304634 -16383220 - MLT1K LTR MaLR -196 392 158 218 323 0 15 chr2 234305064 234305129 -16382725 - L2 LINE L2 -4 3268 3205 825 283 24 65 chr2 234305302 234305673 -16382181 - MLT1I LTR MaLR 0 409 54 194 306 61 41 chr2 234305833 234305931 -16381923 - MIR SINE MIR -94 168 69 245 293 0 0 chr2 234306319 234306377 -16381477 + MIR3 SINE MIR 111 168 -40 251 290 101 14 chr2 234307426 234307464 -16380390 - MIR SINE MIR 0 262 229 2370 171 18 34 chr2 234307464 234307904 -16379950 - Tigger2a DNA MER2_type -1 433 1 251 290 101 14 chr2 234307904 234308003 -16379851 - MIR SINE MIR -33 229 113 274 322 88 66 chr2 234308187 234308507 -16379347 - L2 LINE L2 -50 3263 2937 238 341 111 16 chr2 234309801 234309927 -16377927 - L3 LINE CR1 -1 1576 1439 1553 127 8 13 chr2 234310255 234310492 -16377362 - THE1C LTR MaLR 0 375 140 828 199 25 12 chr2 234310614 234310775 -16377079 - THE1C LTR MaLR -212 163 1 385 294 18 18 chr2 234310820 234310929 -16376925 - MER81 DNA DNA -2 112 4 753 162 0 0 chr2 234311203 234311320 -16376534 + MLT1A1 LTR MaLR 248 364 -1 601 364 212 15 chr2 234311455 234312917 -16374937 + L2 LINE L2 1214 2963 -351 233 256 138 38 chr2 234313023 234313183 -16374671 + L2 LINE L2 3137 3312 -1 22 0 0 0 chr2 234313555 234313577 -16374277 + AT_rich Low_complexity Low_complexity 1 22 0 369 328 57 69 chr2 234313590 234313922 -16373932 - LTR33 LTR ERVL -85 436 109 297 51 0 0 chr2 234314384 234314423 -16373431 + (CAA)n Simple_repeat Simple_repeat 1 39 0 705 227 0 0 chr2 234314776 234314930 -16372924 - L1MA4 LINE L1 -5 6295 6142 226 198 0 70 chr2 234315817 234315903 -16371951 + GA-rich Low_complexity Low_complexity 3 82 0 228 342 40 0 chr2 234317032 234317108 -16370746 - L2 LINE L2 -2 3270 3192 18970 71 10 6 chr2 234317211 234320593 -16367261 - L1PA6 LINE L1 -1 6153 2746 477 254 68 57 chr2 234320681 234320763 -16367091 + MIR SINE MIR 82 162 -100 1878 185 74 10 chr2 234320763 234321169 -16366685 + MSTB1 LTR MaLR 1 432 0 477 254 68 57 chr2 234321169 234321263 -16366591 + MIR SINE MIR 162 260 -2 231 175 63 32 chr2 234321862 234321925 -16365929 - MLT1L LTR MaLR -411 204 140 1639 112 27 12 chr2 234322749 234323008 -16364846 + AluSq SINE Alu 20 282 -31 224 57 0 29 chr2 234323012 234323047 -16364807 + (TAA)n Simple_repeat Simple_repeat 2 35 0 1045 15 15 7 chr2 234323289 234323424 -16364430 + (TTTC)n Simple_repeat Simple_repeat 4 139 0 24 0 0 0 chr2 234324173 234324197 -16363657 + AT_rich Low_complexity Low_complexity 1 24 0 271 294 13 72 chr2 234324224 234324377 -16363477 + MIR SINE MIR 65 208 -54 189 0 0 0 chr2 234326670 234326691 -16361163 + (TA)n Simple_repeat Simple_repeat 1 21 0 292 301 124 16 chr2 234326703 234326889 -16360965 + L1MEc LINE L1 136 341 -6055 1052 308 24 24 chr2 234326996 234327460 -16360394 + L1MEc LINE L1 298 761 -5635 3348 250 92 49 chr2 234327463 234328204 -16359650 + L1MEc LINE L1 1292 2000 -4215 372 22 0 0 chr2 234328204 234328249 -16359605 + (CA)n Simple_repeat Simple_repeat 2 46 0 3348 250 92 49 chr2 234328249 234328997 -16358857 + L1MEc LINE L1 2000 2715 -3500 2097 117 0 0 chr2 234328997 234329301 -16358553 - AluY SINE Alu 0 304 1 3348 250 92 49 chr2 234329301 234329325 -16358529 + L1MEc LINE L1 2715 2737 -3478 1663 164 62 16 chr2 234329325 234329648 -16358206 - MER44D DNA MER2_type -1 608 1 3348 250 92 49 chr2 234329648 234330553 -16357301 + L1MEc LINE L1 2737 3770 -2445 779 221 19 101 chr2 234330572 234330889 -16356965 + L1M4 LINE L1 4904 5194 -952 1952 150 13 0 chr2 234330898 234331205 -16356649 + AluSq SINE Alu 1 311 -2 1045 135 103 0 chr2 234331224 234331409 -16356445 + L1PA13 LINE L1 5936 6139 -24 598 206 43 0 chr2 234331531 234331672 -16356182 + L1MA9 LINE L1 6166 6312 0 228 241 0 0 chr2 234331821 234331879 -16355975 + L1MA9 LINE L1 6248 6305 -7 1515 164 25 21 chr2 234331900 234332180 -16355674 + AluJb SINE Alu 2 282 -30 21 0 0 0 chr2 234332194 234332215 -16355639 + AT_rich Low_complexity Low_complexity 1 21 0 279 314 0 0 chr2 234333664 234333734 -16354120 + polypyrimidine Low_complexity Low_complexity 1 70 0 301 284 208 35 chr2 234333889 234334086 -16353768 - MIR SINE MIR -3 259 29 2075 126 3 10 chr2 234334656 234334966 -16352888 - AluSx SINE Alu -4 308 1 530 351 37 8 chr2 234335563 234335864 -16351990 + L2 LINE L2 2731 3042 -230 311 269 37 46 chr2 234337607 234337715 -16350139 - L2 LINE L2 -34 3279 3173 1376 259 78 31 chr2 234338139 234338688 -16349166 - L1ME3 LINE L1 -17 6145 5571 546 330 26 38 chr2 234338688 234338952 -16348902 - MLT2F LTR ERVL -2 661 401 278 336 0 16 chr2 234338995 234339117 -16348737 - MLT2F LTR ERVL -543 120 1 5426 162 26 8 chr2 234339512 234340851 -16347003 - L1MA7 LINE L1 -9 6282 4918 1075 253 45 4 chr2 234340865 234341134 -16346720 - ERVL LTR ERVL -461 5303 5024 697 231 0 24 chr2 234341435 234341604 -16346250 - MER3 DNA MER1_type -7 202 38 1178 276 95 16 chr2 234341620 234341989 -16345865 - ERVL LTR ERVL -873 4891 4494 2966 272 96 20 chr2 234342154 234342259 -16345595 - ERVL LTR ERVL -1306 4458 4362 1216 102 59 0 chr2 234342259 234342420 -16345434 + MER107 DNA MER1_type 1 176 -21 369 0 0 0 chr2 234342420 234342461 -16345393 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1216 102 59 0 chr2 234342461 234342485 -16345369 + MER107 DNA MER1_type 176 197 0 2966 272 96 20 chr2 234342485 234344049 -16343805 - ERVL LTR ERVL -1402 4362 2546 276 77 0 0 chr2 234344049 234344088 -16343766 + (CA)n Simple_repeat Simple_repeat 2 40 0 2966 272 96 20 chr2 234344088 234344246 -16343608 - ERVL LTR ERVL -3218 2546 2401 1855 145 11 0 chr2 234344352 234344635 -16343219 - AluSx SINE Alu -15 297 12 1140 265 140 45 chr2 234344675 234345598 -16342256 - L1M4 LINE L1 -1450 4696 3687 222 271 17 0 chr2 234345611 234345670 -16342184 - MIR SINE MIR -125 137 78 563 292 58 93 chr2 234345908 234346405 -16341449 + L2 LINE L2 2833 3312 -1 2960 76 13 0 chr2 234449058 234449455 -16238399 - L1PA8 LINE L1 -3 6169 5768 898 220 74 3 chr2 234450073 234450396 -16237458 - MER69 DNA AcHobo -37 2489 2144 516 133 0 0 chr2 234450426 234450501 -16237353 - AluSg/x SINE Alu -28 284 210 203 98 98 16 chr2 234450604 234450665 -16237189 + (CACAC)n Simple_repeat Simple_repeat 1 66 0 503 80 86 0 chr2 234450675 234450826 -16237028 + (CA)n Simple_repeat Simple_repeat 1 164 0 746 72 54 6 chr2 234450862 234451029 -16236825 + (CA)n Simple_repeat Simple_repeat 1 175 0 447 294 55 33 chr2 234451157 234451521 -16236333 + L1MC4a LINE L1 4319 4690 -1456 900 294 114 9 chr2 234451667 234452116 -16235738 + L1MC4a LINE L1 5444 5939 -1869 759 286 40 9 chr2 234452930 234453154 -16234700 - MIR SINE MIR 0 262 32 23 0 0 0 chr2 234453702 234453725 -16234129 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr2 234453787 234453810 -16234044 + AT_rich Low_complexity Low_complexity 1 23 0 3447 191 95 2 chr2 234453871 234454966 -16232888 + L1MB7 LINE L1 4966 6165 -19 236 346 38 0 chr2 234455588 234455707 -16232147 - MIR SINE MIR -23 185 56 1418 149 140 37 chr2 234455906 234456227 -16231627 - THE1A LTR MaLR -1 354 1 217 304 36 0 chr2 234456560 234456616 -16231238 - MIR3 SINE MIR -48 160 103 2138 177 55 7 chr2 234457050 234457486 -16230368 - LTR32 LTR ERVL 0 471 15 1693 229 62 15 chr2 234457732 234458213 -16229641 - MLT1D LTR MaLR 0 505 2 2095 110 51 75 chr2 234458853 234459226 -16228628 + THE1B LTR MaLR 1 364 0 668 301 86 0 chr2 234459230 234459439 -16228415 + MIR SINE MIR 18 244 -18 25 51 0 0 chr2 234459668 234459707 -16228147 + AT_rich Low_complexity Low_complexity 1 39 0 1385 204 85 47 chr2 234460207 234460474 -16227380 - MLT1C LTR MaLR 0 467 175 2186 125 3 0 chr2 234460474 234460770 -16227084 - AluSx SINE Alu -11 301 5 1385 204 85 47 chr2 234460770 234460947 -16226907 - MLT1C LTR MaLR -292 175 6 225 160 0 0 chr2 234461286 234461336 -16226518 - HAL1 LINE L1 -2314 193 144 22 0 0 0 chr2 234461336 234461358 -16226496 + AT_rich Low_complexity Low_complexity 1 22 0 2041 126 11 3 chr2 234461358 234461643 -16226211 - AluSx SINE Alu -25 287 1 819 264 96 23 chr2 234461968 234462541 -16225313 + L1ME4a LINE L1 5486 6100 -21 349 273 69 31 chr2 234464158 234464416 -16223438 - L1ME4a LINE L1 -3 6118 5815 261 312 43 0 chr2 234464424 234464517 -16223337 + L2 LINE L2 3197 3293 -20 247 291 81 54 chr2 234464598 234464746 -16223108 - L1ME4a LINE L1 -405 5716 5565 286 330 119 0 chr2 234464950 234465068 -16222786 - L2 LINE L2 0 3313 3182 2269 126 0 0 chr2 234465329 234465639 -16222215 + AluSx SINE Alu 1 310 -2 237 241 0 0 chr2 234465657 234465711 -16222143 + AluJ/monomer SINE Alu 249 302 0 2016 136 0 3 chr2 234466212 234466498 -16221356 - AluSx SINE Alu -21 291 7 207 0 0 0 chr2 234466519 234466542 -16221312 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2452 83 0 0 chr2 234467829 234468131 -16219723 + AluSc SINE Alu 1 302 -7 207 0 0 0 chr2 234468131 234468154 -16219700 + (TA)n Simple_repeat Simple_repeat 1 23 0 187 370 62 37 chr2 234468227 234468389 -16219465 - L2 LINE L2 0 3272 3107 725 301 12 48 chr2 234468555 234468891 -16218963 + L2 LINE L2 2985 3308 -5 286 303 32 65 chr2 234469045 234469200 -16218654 - L2 LINE L2 -10 3303 3154 1450 249 16 19 chr2 234469273 234469639 -16218215 - MLT1A1 LTR MaLR 0 365 1 471 309 93 10 chr2 234469931 234470125 -16217729 - MARNA DNA Mariner -121 465 256 405 0 0 0 chr2 234470682 234470727 -16217127 + (TG)n Simple_repeat Simple_repeat 1 45 0 2156 119 0 0 chr2 234470783 234471094 -16216760 + AluSq SINE Alu 1 311 0 21 0 0 0 chr2 234472415 234472436 -16215418 + AT_rich Low_complexity Low_complexity 1 21 0 759 229 126 0 chr2 234473123 234473298 -16214556 + MER3 DNA MER1_type 13 209 0 231 259 0 35 chr2 234474309 234474394 -16213460 + GA-rich Low_complexity Low_complexity 4 85 0 441 315 26 52 chr2 234474444 234474711 -16213143 - MIR SINE MIR 0 262 3 202 250 0 0 chr2 234475212 234475256 -16212598 - L2 LINE L2 -7 3265 3222 258 56 0 0 chr2 234476186 234476222 -16211632 + (T)n Simple_repeat Simple_repeat 1 36 0 700 231 19 13 chr2 234476234 234476390 -16211464 + MLT1A2 LTR MaLR 1 157 -217 2252 107 3 3 chr2 234476421 234476729 -16211125 - AluSp SINE Alu -5 308 1 5851 124 26 27 chr2 234476750 234477883 -16209971 - L1PB1 LINE L1 -1 6150 5031 2233 179 0 0 chr2 234477887 234478295 -16209559 + L1PB1 LINE L1 4613 5020 -1126 1126 191 13 34 chr2 234478295 234478530 -16209324 + MLT1A2 LTR MaLR 141 370 -4 327 266 0 0 chr2 234479579 234479658 -16208196 - MER116 DNA Mariner 0 80 2 2239 158 69 12 chr2 234479725 234480130 -16207724 - MSTA LTR MaLR 0 428 1 2557 169 64 43 chr2 234480217 234480408 -16207446 + MER67A LTR ERV1 1 187 -356 2119 112 0 0 chr2 234480408 234480712 -16207142 - AluSq SINE Alu 0 309 6 2557 169 64 43 chr2 234480712 234481050 -16206804 + MER67A LTR ERV1 187 543 0 216 0 0 0 chr2 234482097 234482121 -16205733 + (TG)n Simple_repeat Simple_repeat 2 25 0 1438 236 38 45 chr2 234483497 234483687 -16204167 - Charlie4a DNA MER1_type -1453 508 318 1923 181 3 0 chr2 234483687 234483996 -16203858 - AluJo SINE Alu -2 310 1 1438 236 38 45 chr2 234483996 234484232 -16203622 - Charlie4a DNA MER1_type -1643 318 85 2787 160 85 6 chr2 234484716 234485198 -16202656 + MLT2B1 LTR ERVL 1 520 0 483 277 113 0 chr2 234485201 234485378 -16202476 + MIR SINE MIR 24 220 -42 335 236 0 0 chr2 234485665 234485737 -16202117 - MER116 DNA Mariner -7 73 2 21 26 0 26 chr2 234486004 234486023 -16201831 + AT_rich Low_complexity Low_complexity 1 19 -19 2005 83 0 0 chr2 234486023 234486275 -16201579 + AluY SINE Alu 1 252 -59 21 26 0 26 chr2 234486275 234486294 -16201560 + AT_rich Low_complexity Low_complexity 19 38 0 300 200 86 14 chr2 234487045 234487115 -16200739 - L2 LINE L2 -36 3236 3162 2131 131 0 6 chr2 234487171 234487484 -16200370 - AluSx SINE Alu 0 312 2 1591 138 0 50 chr2 234488214 234488474 -16199380 - AluSx SINE Alu -10 302 56 721 264 159 50 chr2 234489610 234490026 -16197828 + MLT1K LTR MaLR 128 588 0 2347 82 0 0 chr2 234490219 234490511 -16197343 - AluY SINE Alu -19 292 1 1096 69 0 0 chr2 234491057 234491188 -16196666 - AluY SINE Alu -180 131 1 1810 90 20 4 chr2 234491226 234491470 -16196384 - L1PA13 LINE L1 -2 6161 5914 333 255 98 29 chr2 234491755 234491857 -16195997 + MLT1L LTR MaLR 86 194 -421 335 293 56 72 chr2 234492634 234492886 -16194968 - MIR SINE MIR -11 251 3 223 275 29 0 chr2 234493326 234493395 -16194459 + GA-rich Low_complexity Low_complexity 2 72 0 1843 164 0 14 chr2 234493845 234494137 -16193717 - AluJo SINE Alu -24 288 1 757 277 23 18 chr2 234495297 234495517 -16192337 - MIR SINE MIR -40 222 2 1814 259 76 28 chr2 234496065 234496133 -16191721 + L2 LINE L2 2152 2215 -1099 1916 210 160 66 chr2 234496133 234496727 -16191127 + MLT1E1 LTR MaLR 5 654 0 1814 259 76 28 chr2 234496727 234497234 -16190620 + L2 LINE L2 2215 2755 -559 520 233 45 74 chr2 234497234 234497436 -16190418 + MLT1H LTR MaLR 11 206 -343 231 275 14 101 chr2 234497641 234497779 -16190075 + MLT1H LTR MaLR 424 549 0 405 280 168 42 chr2 234497781 234498219 -16189635 + L2 LINE L2 2763 3252 -61 1656 173 33 10 chr2 234499186 234499486 -16188368 - AluJo SINE Alu -5 307 1 222 220 0 0 chr2 234500028 234500087 -16187767 + (TAA)n Simple_repeat Simple_repeat 3 61 0 224 280 80 0 chr2 234500089 234500164 -16187690 - MIR SINE MIR -2 260 180 335 268 21 41 chr2 234500212 234500309 -16187545 + MIR SINE MIR 22 116 -146 333 240 0 54 chr2 234501015 234501144 -16186710 + GA-rich Low_complexity Low_complexity 2 123 0 251 260 52 0 chr2 234501520 234501597 -16186257 - MER103 DNA DNA -9 157 77 279 0 0 0 chr2 234502421 234502452 -16185402 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 607 257 75 42 chr2 234502558 234502915 -16184939 + MLT1J2 LTR MaLR 37 409 0 315 344 31 38 chr2 234503148 234503165 -16184689 + MIR3 SINE MIR 33 49 -159 1569 169 156 24 chr2 234503165 234503543 -16184311 + MSTC LTR MaLR 1 428 0 315 344 31 38 chr2 234503543 234503685 -16184169 + MIR3 SINE MIR 49 191 -17 342 0 0 0 chr2 234504943 234504981 -16182873 + (TG)n Simple_repeat Simple_repeat 2 39 0 2475 58 3 0 chr2 234505027 234505322 -16182532 + AluSc SINE Alu 1 296 -13 354 299 237 23 chr2 234505353 234505745 -16182109 - L2 LINE L2 -5 3308 2833 684 217 45 19 chr2 234505752 234505909 -16181945 - MER20 DNA MER1_type 0 219 59 1678 206 33 38 chr2 234506002 234506354 -16181500 + MLT2D LTR ERVL 2 353 -61 288 0 0 0 chr2 234506354 234506386 -16181468 + (CA)n Simple_repeat Simple_repeat 2 33 0 1678 206 33 38 chr2 234506386 234506431 -16181423 + MLT2D LTR ERVL 353 397 -17 186 118 0 0 chr2 234506451 234506485 -16181369 + (CA)n Simple_repeat Simple_repeat 2 35 0 282 116 0 0 chr2 234506527 234506570 -16181284 + (TA)n Simple_repeat Simple_repeat 2 44 0 254 65 0 0 chr2 234506600 234506631 -16181223 + MLT2D LTR ERVL 367 397 -17 223 167 0 24 chr2 234506632 234506674 -16181180 + (CA)n Simple_repeat Simple_repeat 2 42 0 232 135 77 0 chr2 234506680 234506732 -16181122 + MLT2C2 LTR ERVL 407 462 -2 538 88 0 239 chr2 234508265 234508424 -16179430 - L1MA4 LINE L1 -22 6278 6158 266 291 0 47 chr2 234508885 234508971 -16178883 + MIR SINE MIR 87 168 -94 226 279 88 54 chr2 234509053 234509200 -16178654 - L2 LINE L2 -3 3310 3159 210 263 246 47 chr2 234509457 234509628 -16178226 + MIR SINE MIR 48 252 -10 264 327 64 19 chr2 234510402 234510558 -16177296 + MIR SINE MIR 84 246 -16 495 249 32 88 chr2 234510638 234510855 -16176999 - MIR SINE MIR -50 212 8 510 254 117 82 chr2 234510930 234511272 -16176582 - MLT2C1 LTR ERVL 0 397 44 * 548 165 10 0 chr2 234511182 234511279 -16176575 - MLT1E3 LTR MaLR -469 155 58 511 299 21 7 chr2 234511290 234511434 -16176420 - MLT2F LTR ERVL -517 146 1 1268 248 157 26 chr2 234511993 234512033 -16175821 - MLT2B1 LTR ERVL 0 520 487 243 0 0 0 chr2 234512033 234512060 -16175794 + (TG)n Simple_repeat Simple_repeat 2 28 0 1268 248 157 26 chr2 234512060 234512479 -16175375 - MLT2B1 LTR ERVL -33 487 1 1780 256 96 26 chr2 234512917 234513418 -16174436 + MLT1H LTR MaLR 12 547 -2 213 121 0 0 chr2 234514847 234514880 -16172974 + (TAG)n Simple_repeat Simple_repeat 3 35 0 663 231 41 56 chr2 234514936 234515131 -16172723 - MIR SINE MIR -70 192 1 201 237 0 0 chr2 234515397 234515456 -16172398 + GA-rich Low_complexity Low_complexity 1 59 0 909 207 36 0 chr2 234516895 234517117 -16170737 + L1PA16 LINE L1 5173 5402 -744 6082 123 30 64 chr2 234517131 234518628 -16169226 - pTR5 LTR ERV1 0 2438 743 5178 130 8 4 chr2 234518628 234519382 -16168472 + L1PA16 LINE L1 5410 6166 0 1749 99 14 71 chr2 234519388 234519670 -16168184 + AluY SINE Alu 1 266 -45 314 213 40 0 chr2 234520142 234520217 -16167637 + MER103 DNA DNA 2 79 -87 2023 155 0 3 chr2 234520938 234521270 -16166584 + AluJb SINE Alu 1 312 0 448 266 136 65 chr2 234521637 234522020 -16165834 - L2 LINE L2 -817 2497 2088 217 248 57 38 chr2 234523089 234523194 -16164660 + MIR SINE MIR 150 256 -6 421 297 9 0 chr2 234523736 234523847 -16164007 + MER94 DNA DNA 1 112 -22 2106 114 31 0 chr2 234523972 234524262 -16163592 - AluSx SINE Alu -13 299 1 24 32 0 0 chr2 234524652 234524683 -16163171 + AT_rich Low_complexity Low_complexity 1 31 0 2077 138 3 0 chr2 234525328 234525619 -16162235 + AluSx SINE Alu 1 292 -20 440 226 0 4 chr2 234525941 234526031 -16161823 + MER5A DNA MER1_type 15 112 -77 240 288 0 0 chr2 234526667 234526813 -16161041 + (TG)n Simple_repeat Simple_repeat 1 146 0 468 324 0 0 chr2 234526850 234527029 -16160825 + (TG)n Simple_repeat Simple_repeat 2 180 0 447 152 0 13 chr2 234527948 234528027 -16159827 - AluJ/FRAM SINE Alu -3 309 232 349 313 66 55 chr2 234528506 234528688 -16159166 - MIR SINE MIR -45 217 34 807 154 0 0 chr2 234528753 234528870 -16158984 - FLAM_C SINE Alu -25 118 2 2310 154 80 17 chr2 234529912 234530314 -16157540 - MSTA LTR MaLR 0 428 2 1023 178 89 11 chr2 234531883 234532074 -16155780 - MER3 DNA MER1_type -1 208 3 637 247 137 19 chr2 234532176 234532447 -16155407 - L2 LINE L2 -1089 2225 1923 2403 102 0 0 chr2 234532679 234532984 -16154870 - AluSg SINE Alu -5 305 1 295 298 42 52 chr2 234532985 234533176 -16154678 - HAL1b LINE L1 -414 934 746 23 33 0 0 chr2 234534283 234534313 -16153541 + AT_rich Low_complexity Low_complexity 1 30 0 621 262 134 76 chr2 234535070 234535570 -16152284 - MLT1K LTR MaLR -16 572 44 1902 134 62 56 chr2 234535621 234535994 -16151860 - THE1C LTR MaLR 0 375 1 2579 52 10 0 chr2 234536224 234536529 -16151325 + AluY SINE Alu 1 308 -3 1252 190 182 32 chr2 234536701 234537072 -16150782 + MSTC LTR MaLR 1 428 0 848 233 44 0 chr2 234537512 234537692 -16150162 - MER5A DNA MER1_type 0 189 2 299 259 47 90 chr2 234538314 234538359 -16149495 + MER112 DNA MER1_type 17 62 -198 1736 74 0 0 chr2 234538359 234538574 -16149280 + L1MA1 LINE L1 6082 6296 -6 299 259 47 90 chr2 234538574 234538604 -16149250 + MER112 DNA MER1_type 62 92 -168 231 61 0 0 chr2 234538604 234538637 -16149217 + (CA)n Simple_repeat Simple_repeat 2 34 0 299 259 47 90 chr2 234538637 234538815 -16149039 + MER112 DNA MER1_type 92 260 0 2801 115 0 3 chr2 234539160 234539525 -16148329 - THE1B LTR MaLR 0 364 1 1169 170 0 32 chr2 234540187 234540405 -16147449 - AluJb SINE Alu 0 312 102 2367 147 23 61 chr2 234540714 234540742 -16147112 + MSTB LTR MaLR 1 29 -397 2197 134 47 33 chr2 234540742 234541101 -16146753 + THE1B LTR MaLR 1 364 0 2367 147 23 61 chr2 234541101 234541435 -16146419 + MSTB LTR MaLR 29 346 -80 1813 150 7 0 chr2 234541435 234541708 -16146146 - AluSx SINE Alu -13 299 25 2367 147 23 61 chr2 234541708 234541787 -16146067 + MSTB LTR MaLR 346 426 0 771 148 0 0 chr2 234542198 234542333 -16145521 + (CA)n Simple_repeat Simple_repeat 2 136 0 191 297 162 18 chr2 234543253 234543364 -16144490 + MIR SINE MIR 117 243 -19 2347 102 0 0 chr2 234544034 234544339 -16143515 - AluSp SINE Alu -7 306 2 870 292 123 41 chr2 234544347 234545003 -16142851 - L2 LINE L2 -266 3047 2334 818 174 0 0 chr2 234546008 234546129 -16141725 - FLAM_A SINE Alu -12 121 1 369 62 0 0 chr2 234546848 234546896 -16140958 + (TTG)n Simple_repeat Simple_repeat 1 48 0 218 232 18 18 chr2 234548053 234548109 -16139745 + GA-rich Low_complexity Low_complexity 2 57 0 881 247 5 36 chr2 234548697 234548916 -16138938 - MIR SINE MIR -33 229 18 199 324 103 21 chr2 234549006 234549151 -16138703 + MIR SINE MIR 96 252 -10 3129 72 10 0 chr2 234549270 234549658 -16138196 + L1PA8 LINE L1 5777 6168 -4 2021 228 110 42 chr2 234549697 234550272 -16137582 + MLT1E2 LTR MaLR 13 626 0 255 274 0 0 chr2 234550273 234550335 -16137519 - L2 LINE L2 -28 3244 3183 354 306 118 32 chr2 234551132 234551318 -16136536 + L2 LINE L2 3028 3229 -84 22 0 0 0 chr2 234551452 234551474 -16136380 + AT_rich Low_complexity Low_complexity 1 22 0 2737 169 89 20 chr2 234551474 234551883 -16135971 - L1MA9 LINE L1 -22 6290 5911 249 33 0 0 chr2 234551883 234551913 -16135941 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 2737 169 89 20 chr2 234551913 234552175 -16135679 - L1MA9 LINE L1 -401 5911 5476 236 283 139 69 chr2 234552237 234552410 -16135444 + MLT1K LTR MaLR 171 355 -233 288 0 0 0 chr2 234552682 234552714 -16135140 + (TG)n Simple_repeat Simple_repeat 1 32 0 2032 131 7 13 chr2 234553720 234554025 -16133829 + AluSx SINE Alu 9 311 -1 612 268 86 41 chr2 234555639 234555953 -16131901 - L1ME4a LINE L1 -220 5901 5574 764 271 115 55 chr2 234556652 234557117 -16130737 + MLT1H LTR MaLR 2 549 0 203 314 23 23 chr2 234557204 234557290 -16130564 - L2 LINE L2 -213 3059 2974 285 51 0 0 chr2 234557995 234558034 -16129820 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 228 203 102 17 chr2 234558060 234558119 -16129735 - LTR33A LTR ERVL -335 188 125 226 357 54 42 chr2 234558149 234558317 -16129537 - L2 LINE L2 -4 3268 3099 253 257 29 0 chr2 234558489 234558559 -16129295 - MIR SINE MIR -79 129 58 191 296 28 28 chr2 234558839 234558910 -16128944 - L2 LINE L2 -9 3263 3193 2364 188 24 22 chr2 234559801 234560259 -16127595 - L1MC1 LINE L1 0 6333 5875 1018 303 58 16 chr2 234560638 234561073 -16126781 + ERVL LTR ERVL 4911 5363 -401 808 248 145 11 chr2 234561448 234561967 -16125887 + LTR50 LTR ERVL 2 681 -114 241 271 104 21 chr2 234562844 234562940 -16124914 + MIR SINE MIR 40 143 -65 278 65 0 22 chr2 234563800 234563846 -16124008 + (TG)n Simple_repeat Simple_repeat 2 46 0 181 274 216 78 chr2 234564824 234564977 -16122877 - MIR3 SINE MIR -26 182 9 1927 234 78 48 chr2 234565180 234565745 -16122109 - MLT1E LTR MaLR -11 582 1 349 301 121 29 chr2 234566091 234566264 -16121590 + MIR SINE MIR 49 237 -25 458 273 0 15 chr2 234566429 234566561 -16121293 + MIR SINE MIR 132 261 -1 573 261 18 24 chr2 234566593 234566758 -16121096 + MIR SINE MIR 88 251 -11 198 103 0 0 chr2 234567220 234567249 -16120605 + (T)n Simple_repeat Simple_repeat 1 29 0 29 28 0 0 chr2 234567317 234567353 -16120501 + AT_rich Low_complexity Low_complexity 1 36 0 261 232 14 0 chr2 234567925 234567994 -16119860 + GA-rich Low_complexity Low_complexity 1 70 0 2225 106 3 13 chr2 234569657 234569958 -16117896 - AluSx SINE Alu -14 298 1 650 272 181 21 chr2 234570042 234570586 -16117268 - L2 LINE L2 -3 3310 2671 318 26 0 0 chr2 234571235 234571274 -16116580 + (TG)n Simple_repeat Simple_repeat 2 40 0 4034 44 2 2 chr2 234571402 234571901 -16115953 + L1PA5 LINE L1 5648 6146 -8 266 287 20 10 chr2 234572037 234572138 -16115716 - L1ME3 LINE L1 -57 6105 6004 295 281 63 76 chr2 234573004 234573242 -16114612 - MLT1K LTR MaLR -330 258 24 23 0 0 0 chr2 234573618 234573641 -16114213 + AT_rich Low_complexity Low_complexity 1 23 0 23139 178 15 24 chr2 234573800 234580380 -16107474 + L1PA11 LINE L1 8 7608 -4 191 263 18 0 chr2 234581010 234581067 -16106787 + MIR SINE MIR 159 216 -46 709 299 52 13 chr2 234582253 234582484 -16105370 - MIR SINE MIR -1 261 22 379 270 56 16 chr2 234582668 234582794 -16105060 + MIR SINE MIR 75 205 -57 190 259 157 54 chr2 234582929 234583076 -16104778 - L2 LINE L2 -825 2489 2328 724 306 58 9 chr2 234583834 234584177 -16103677 - LTR16C LTR ERVL 0 491 132 184 29 114 0 chr2 234584180 234584215 -16103639 + A-rich Low_complexity Low_complexity 2 40 0 182 222 0 44 chr2 234584435 234584480 -16103374 - MIR SINE MIR -116 146 104 1096 180 0 53 chr2 234585639 234585812 -16102042 - L1MC/D LINE L1 -671 5688 5530 4107 130 5 2 chr2 234585812 234586444 -16101410 + MER41B LTR ERV1 1 634 -1 1096 180 0 53 chr2 234586444 234586514 -16101340 - L1MC/D LINE L1 -829 5530 5458 282 312 28 0 chr2 234586515 234586624 -16101230 - MER94 DNA DNA -19 115 4 839 136 68 6 chr2 234586678 234586906 -16100948 - L1MC/D LINE L1 -743 5403 5200 500 245 21 10 chr2 234586931 234587123 -16100731 - L1MC/D LINE L1 -1005 5141 4948 712 299 61 4 chr2 234587687 234587918 -16099936 - MIR SINE MIR -6 256 13 317 209 139 0 chr2 234588146 234588232 -16099622 + MIR SINE MIR 87 184 -78 2648 30 0 3 chr2 234588399 234588703 -16099151 - AluY SINE Alu -8 303 1 317 207 37 37 chr2 234589493 234589575 -16098279 - MER5B DNA MER1_type 0 178 97 7977 9 0 0 chr2 234591135 234592202 -16095652 - L1PA2 LINE L1 -1 6154 5088 3713 34 0 0 chr2 234592202 234592671 -16095183 + L1PA2 LINE L1 4603 5071 -1075 431 261 89 92 chr2 234592781 234593152 -16094702 - L1MC5 LINE L1 -35 7926 7557 391 272 109 41 chr2 234593432 234593465 -16094389 - MIR SINE MIR -6 256 227 2233 118 33 33 chr2 234593465 234593829 -16094025 - THE1B LTR MaLR 0 364 1 391 272 109 41 chr2 234593829 234593942 -16093912 - MIR SINE MIR -35 227 100 228 295 98 60 chr2 234594155 234594338 -16093516 - L2 LINE L2 -529 2785 2596 466 202 223 45 chr2 234594381 234594510 -16093344 - L1ME4a LINE L1 -1 6120 6015 252 86 0 0 chr2 234594510 234594545 -16093309 + (CA)n Simple_repeat Simple_repeat 2 36 0 466 202 223 45 chr2 234594545 234594751 -16093103 - L1ME4a LINE L1 -106 6015 5725 1819 171 3 13 chr2 234595718 234596023 -16091831 + AluJo SINE Alu 5 306 -6 379 349 71 28 chr2 234596655 234596867 -16090987 + MIR SINE MIR 4 224 -38 192 179 0 0 chr2 234597599 234597638 -16090216 + (TG)n Simple_repeat Simple_repeat 2 40 0 2925 120 2 18 chr2 234597686 234598120 -16089734 - MSTA LTR MaLR -1 427 1 253 311 14 0 chr2 234599125 234599199 -16088655 - L3 LINE CR1 -606 971 897 1161 112 29 5 chr2 234599360 234599566 -16088288 - L1MA7 LINE L1 0 6291 6081 725 151 84 42 chr2 234599606 234599772 -16088082 + MLT1B LTR MaLR 1 173 -217 24 32 0 0 chr2 234599827 234599858 -16087996 + AT_rich Low_complexity Low_complexity 1 31 0 219 139 0 0 chr2 234600744 234600780 -16087074 + (TG)n Simple_repeat Simple_repeat 1 36 0 1179 166 125 74 chr2 234601751 234602118 -16085736 + MLT1B LTR MaLR 5 390 0 1602 125 28 31 chr2 234602550 234602837 -16085017 + L1PA16 LINE L1 5881 6166 0 1676 137 4 8 chr2 234602983 234603231 -16084623 - AluSg/x SINE Alu 0 312 66 846 157 0 27 chr2 234603234 234603381 -16084473 - FRAM SINE Alu -5 171 29 605 181 110 99 chr2 234605385 234605567 -16082287 + MER20 DNA MER1_type 3 186 -33 423 119 0 0 chr2 234608182 234608249 -16079605 + (TA)n Simple_repeat Simple_repeat 1 67 0 2611 139 42 5 chr2 234608278 234608710 -16079144 - MER83 LTR ERV1 0 448 1 415 286 100 36 chr2 234609069 234609429 -16078425 + HAL1b LINE L1 102 484 -864 611 274 19 66 chr2 234609892 234610104 -16077750 + MIR SINE MIR 28 229 -33 2207 99 0 0 chr2 234610578 234610860 -16076994 + AluSq SINE Alu 16 297 -16 407 281 66 106 chr2 234611771 234612027 -16075827 - MIR SINE MIR 0 262 17 852 218 10 0 chr2 234614389 234614582 -16073272 - MLT1B LTR MaLR 0 390 196 189 186 0 23 chr2 234615171 234615214 -16072640 + L2 LINE L2 3262 3303 -10 496 312 75 15 chr2 234615665 234615864 -16071990 + MIR SINE MIR 20 230 -32 2202 167 20 89 chr2 234615904 234616442 -16071412 + MLT1D LTR MaLR 3 503 -2 183 346 148 0 chr2 234616571 234616652 -16071202 - L3 LINE CR1 -134 1443 1351 2065 131 3 23 chr2 234616942 234617247 -16070607 + AluSx SINE Alu 1 299 -13 2413 121 14 16 chr2 234618981 234619345 -16068509 + THE1B LTR MaLR 2 364 0 2033 139 3 0 chr2 234619840 234620135 -16067719 - AluSx SINE Alu -16 296 1 1811 233 34 89 chr2 234620174 234620905 -16066949 - LTR8 LTR ERV1 0 691 1 24 32 0 0 chr2 234621328 234621359 -16066495 + AT_rich Low_complexity Low_complexity 1 31 0 442 68 17 0 chr2 234621365 234621424 -16066430 - U6 snRNA snRNA -47 60 1 1814 185 110 66 chr2 234621424 234621508 -16066346 + MLT2B1 LTR ERVL 1 80 -440 2521 111 6 0 chr2 234621508 234621861 -16065993 - THE1A LTR MaLR 0 355 1 1814 185 110 66 chr2 234621861 234622274 -16065580 + MLT2B1 LTR ERVL 80 520 0 1546 195 3 22 chr2 234622326 234622644 -16065210 + AluJo SINE Alu 1 312 0 2334 130 28 0 chr2 234623346 234623700 -16064154 + THE1B LTR MaLR 1 364 0 223 273 66 66 chr2 234623722 234623843 -16064011 + L2 LINE L2 3182 3302 -11 1808 116 131 24 chr2 234624534 234624871 -16062983 + THE1C LTR MaLR 1 373 -2 258 317 0 12 chr2 234625741 234625823 -16062031 + MER5A DNA MER1_type 19 99 -90 2382 163 36 11 chr2 234626591 234626891 -16060963 + L1MC1 LINE L1 5845 6163 -170 2544 93 3 40 chr2 234626891 234627268 -16060586 + THE1B LTR MaLR 1 363 -1 2382 163 36 11 chr2 234627268 234627439 -16060415 + L1MC1 LINE L1 6163 6328 -5 309 288 0 0 chr2 234627770 234627843 -16060011 + (CA)n Simple_repeat Simple_repeat 2 74 0 356 326 135 49 chr2 234627878 234628286 -16059568 - L2 LINE L2 -557 2757 2315 294 263 70 53 chr2 234628287 234628401 -16059453 - L2 LINE L2 0 3313 3198 187 336 162 29 chr2 234628483 234629210 -16058644 - L2 LINE L2 -1050 2264 1441 26 0 0 0 chr2 234630036 234630062 -16057792 + AT_rich Low_complexity Low_complexity 1 26 0 357 236 99 103 chr2 234630388 234630494 -16057360 + MER69 DNA AcHobo 2041 2146 -380 1346 191 0 72 chr2 234630494 234630645 -16057209 + AluSx SINE Alu 1 118 -194 513 0 0 0 chr2 234630645 234630702 -16057152 + (TA)n Simple_repeat Simple_repeat 1 57 0 1346 191 0 72 chr2 234630702 234630870 -16056984 + AluSx SINE Alu 118 297 -15 357 236 99 103 chr2 234630870 234631026 -16056828 + MER69 DNA AcHobo 2146 2302 -224 360 0 0 0 chr2 234631638 234631678 -16056176 + (TA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr2 234632438 234632459 -16055395 + AT_rich Low_complexity Low_complexity 1 21 0 717 312 35 9 chr2 234633663 234633894 -16053960 - LTR16B LTR ERVL -225 239 3 600 299 128 53 chr2 234634046 234634444 -16053410 - MLT1K LTR MaLR -35 553 126 195 309 143 12 chr2 234635235 234635319 -16052535 + MIR SINE MIR 24 118 -90 2048 160 39 18 chr2 234635820 234636201 -16051653 - Tigger2 DNA MER2_type 0 2718 2330 227 269 0 0 chr2 234636178 234636230 -16051624 + MER8 DNA MER2_type 187 238 -1 * 504 69 14 0 chr2 234637796 234637868 -16049986 - Alu SINE Alu -16 295 223 332 82 20 0 chr2 234637879 234637928 -16049926 + MADE1 DNA Mariner 29 78 -2 2161 117 0 0 chr2 234637999 234638298 -16049556 + AluSc SINE Alu 1 299 -10 1558 223 103 7 chr2 234638787 234639205 -16048649 + MLT1C LTR MaLR 1 458 -9 2454 112 94 55 chr2 234639702 234640210 -16047644 - L1MA9 LINE L1 0 6312 5785 279 136 0 37 chr2 234640212 234640293 -16047561 + (TA)n Simple_repeat Simple_repeat 2 79 0 1645 128 27 0 chr2 234640295 234640553 -16047301 - L1MA9 LINE L1 -523 5789 5525 708 89 0 0 chr2 234640640 234640741 -16047113 + (TCTA)n Simple_repeat Simple_repeat 4 104 0 1334 181 69 35 chr2 234641739 234642027 -16045827 + MSTB LTR MaLR 129 426 0 2261 132 91 5 chr2 234642856 234643250 -16044604 + MSTA LTR MaLR 1 428 0 23 33 0 0 chr2 234643625 234643655 -16044199 + AT_rich Low_complexity Low_complexity 1 30 0 304 278 64 25 chr2 234643676 234643757 -16044097 - L1MC4a LINE L1 -317 5873 5797 2070 125 7 0 chr2 234643757 234644053 -16043801 - AluSx SINE Alu -14 298 1 304 278 64 25 chr2 234644053 234644231 -16043623 - L1MC4a LINE L1 -393 5797 5709 23 0 0 0 chr2 234644514 234644537 -16043317 + AT_rich Low_complexity Low_complexity 1 23 0 1643 210 15 0 chr2 234644604 234644933 -16042921 - L1MC1 LINE L1 -6 6327 5994 259 315 47 16 chr2 234646088 234646215 -16041639 - L1MC4a LINE L1 -1956 4259 4129 479 301 53 34 chr2 234647293 234647499 -16040355 + L2 LINE L2 3104 3313 0 322 319 0 0 chr2 234648117 234648211 -16039643 - L1MC4 LINE L1 -1335 6707 6614 314 278 21 21 chr2 234648130 234648227 -16039627 + L1MC4 LINE L1 6615 6711 -1331 * 201 200 0 55 chr2 234648843 234648898 -16038956 - L2 LINE L2 -1908 1406 1355 2169 126 19 24 chr2 234649160 234649534 -16038320 + THE1C LTR MaLR 1 372 -3 2130 95 7 0 chr2 234649911 234650185 -16037669 + AluSc SINE Alu 1 276 -33 381 75 0 0 chr2 234650207 234650260 -16037594 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 1048 278 137 20 chr2 234650963 234651366 -16036488 + LTR16A LTR ERVL 1 450 0 1201 294 57 5 chr2 234651369 234651754 -16036100 + LTR16A LTR ERVL 46 450 0 246 32 0 0 chr2 234651921 234651952 -16035902 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1985 109 3 25 chr2 234651957 234652241 -16035613 - AluSc SINE Alu -31 278 1 604 258 141 30 chr2 234652519 234652935 -16034919 + MLT1J LTR MaLR 2 501 -10 223 222 28 0 chr2 234653206 234653278 -16034576 + (TA)n Simple_repeat Simple_repeat 2 75 0 482 283 100 17 chr2 234655204 234655384 -16032470 + MIR SINE MIR 58 252 -10 1212 164 35 0 chr2 234655713 234655914 -16031940 - AluJb SINE Alu -12 300 93 1417 244 50 126 chr2 234655915 234656725 -16031129 - L1M4 LINE L1 -882 5264 4477 433 172 11 21 chr2 234656725 234656818 -16031036 - FLAM_A SINE Alu -16 126 35 1417 244 50 126 chr2 234656818 234657126 -16030728 - L1M4 LINE L1 -1669 4477 4147 323 253 0 80 chr2 234657139 234657289 -16030565 - L1MC4a LINE L1 -2246 3969 3832 * 840 256 120 49 chr2 234657272 234658051 -16029803 - L1MEc LINE L1 -3222 2993 2169 1765 169 0 43 chr2 234658051 234658377 -16029477 - AluSx SINE Alu 0 312 1 840 256 120 49 chr2 234658377 234658401 -16029453 - L1MEc LINE L1 -4046 2169 2148 * 10819 163 39 30 chr2 234658388 234659187 -16028667 - L1MA5 LINE L1 -1 6299 5509 2490 53 7 0 chr2 234659187 234659491 -16028363 + AluY SINE Alu 1 306 -5 10819 163 39 30 chr2 234659491 234660742 -16027112 - L1PA14 LINE L1 -791 5509 4271 4278 105 6 5 chr2 234660742 234661372 -16026482 + L1PA14 LINE L1 5527 6157 -4 10819 163 39 30 chr2 234661372 234662726 -16025128 - L1MA5 LINE L1 -2029 4271 2855 948 168 73 5 chr2 234662728 234662919 -16024935 - MLT1C LTR MaLR -263 204 1 2102 121 0 3 chr2 234663162 234663460 -16024394 + AluSq SINE Alu 1 297 -16 2127 105 7 3 chr2 234664682 234664978 -16022876 + AluSx SINE Alu 5 301 -11 418 351 71 0 chr2 234666968 234667136 -16020718 + MER91A DNA MER1_type 17 196 0 24 0 0 0 chr2 234667276 234667300 -16020554 + AT_rich Low_complexity Low_complexity 1 24 0 1758 104 0 29 chr2 234667300 234667578 -16020276 - L1PB1 LINE L1 -3 6148 5879 467 145 0 0 chr2 234667864 234667933 -16019921 - AluS SINE Alu -244 69 1 666 240 49 21 chr2 234667934 234668259 -16019595 - L1M4 LINE L1 -2808 3338 3005 318 222 44 11 chr2 234669178 234669268 -16018586 - MIR SINE MIR -168 94 2 25 31 0 0 chr2 234671632 234671664 -16016190 + AT_rich Low_complexity Low_complexity 1 32 0 192 329 71 12 chr2 234671673 234671758 -16016096 - MIR SINE MIR -81 127 38 237 159 0 0 chr2 234671830 234671874 -16015980 + (CA)n Simple_repeat Simple_repeat 1 44 0 208 311 54 27 chr2 234672224 234672298 -16015556 + MER91C DNA MER1_type 33 108 -32 2414 89 0 0 chr2 234672794 234673098 -16014756 + AluY SINE Alu 1 304 -7 23 0 0 0 chr2 234673849 234673872 -16013982 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 234673879 234673900 -16013954 + AT_rich Low_complexity Low_complexity 1 21 0 342 331 45 13 chr2 234674028 234674185 -16013669 + MLT1K LTR MaLR 58 219 -369 304 305 93 0 chr2 234674284 234674402 -16013452 + MLT1K LTR MaLR 353 481 -107 252 77 0 0 chr2 234675379 234675418 -16012436 + (TG)n Simple_repeat Simple_repeat 1 39 0 759 272 23 58 chr2 234675953 234676214 -16011640 + MIR SINE MIR 11 262 0 236 158 18 0 chr2 234676243 234676300 -16011554 + (CAT)n Simple_repeat Simple_repeat 1 58 0 225 0 0 0 chr2 234676788 234676813 -16011041 + (TA)n Simple_repeat Simple_repeat 1 25 0 4281 83 2 0 chr2 234676824 234677377 -16010477 - MER41A LTR ERV1 0 554 1 182 36 0 36 chr2 234677404 234677432 -16010422 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 342 0 0 0 chr2 234677476 234677514 -16010340 + (CA)n Simple_repeat Simple_repeat 1 38 0 249 33 0 0 chr2 234678462 234678492 -16009362 + (TG)n Simple_repeat Simple_repeat 1 30 0 641 236 101 25 chr2 234680926 234681163 -16006691 + MER112 DNA MER1_type 1 255 -1 405 238 24 16 chr2 234682155 234682281 -16005573 - MER3 DNA MER1_type 0 209 83 1925 44 0 0 chr2 234682588 234682814 -16005040 - AluY SINE Alu 0 311 86 24 0 0 0 chr2 234684895 234684919 -16002935 + AT_rich Low_complexity Low_complexity 1 24 0 1665 191 14 0 chr2 234685430 234685723 -16002131 - AluJo SINE Alu -15 297 1 944 134 8 0 chr2 234685723 234685857 -16001997 - AluJo SINE Alu -177 135 1 222 160 0 0 chr2 234685907 234685957 -16001897 + T-rich Low_complexity Low_complexity 1 50 0 194 320 0 0 chr2 234686546 234686596 -16001258 - L2 LINE L2 -18 3295 3246 1035 275 80 14 chr2 234686871 234687285 -16000569 - LTR16A LTR ERVL -2 448 8 628 345 112 24 chr2 234687295 234687962 -15999892 - L2 LINE L2 -597 2717 1992 517 200 0 66 chr2 234688023 234688189 -15999665 - L1MB8 LINE L1 0 6178 6016 541 283 100 78 chr2 234688226 234688764 -15999090 - L1M4 LINE L1 -825 5321 4772 230 25 0 75 chr2 234689368 234689408 -15998446 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 322 278 81 52 chr2 234689689 234689862 -15997992 + MIR3 SINE MIR 3 150 -58 253 187 67 13 chr2 234690078 234690153 -15997701 - HsTC2 DNA Tc2 -1819 79 1 449 318 19 57 chr2 234690746 234690957 -15996897 + MIR SINE MIR 2 204 -58 239 259 0 0 chr2 234691113 234691167 -15996687 + MIR SINE MIR 184 237 -25 866 251 14 19 chr2 234691877 234692092 -15995762 + MER58A DNA MER1_type 1 214 -10 2056 291 142 15 chr2 234692685 234693720 -15994134 - L2 LINE L2 0 3313 2122 562 274 74 28 chr2 234694551 234694905 -15992949 + L1P LINE L1 3614 3976 -2170 440 118 68 12 chr2 234694912 234695073 -15992781 + (CA)n Simple_repeat Simple_repeat 2 171 0 262 137 81 6 chr2 234695128 234695289 -15992565 + (CA)n Simple_repeat Simple_repeat 1 173 0 735 175 8 0 chr2 234695746 234695866 -15991988 - FLAM_A SINE Alu -12 121 1 207 0 0 0 chr2 234696097 234696120 -15991734 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1778 141 14 7 chr2 234696141 234696424 -15991430 + AluSx SINE Alu 7 291 -21 2313 58 14 7 chr2 234697404 234697698 -15990156 - AluSc SINE Alu -13 296 1 342 0 0 0 chr2 234697744 234697782 -15990072 + (CA)n Simple_repeat Simple_repeat 2 39 0 550 244 10 66 chr2 234698069 234698266 -15989588 + MLT1H LTR MaLR 362 547 -2 3889 204 45 29 chr2 234748491 234749436 -15938418 + Cheshire DNA MER1_type 1001 1961 -459 294 132 19 0 chr2 234749496 234749549 -15938305 + Cheshire DNA MER1_type 1970 2023 -397 28 48 0 0 chr2 234750560 234750602 -15937252 + AT_rich Low_complexity Low_complexity 1 42 0 664 85 0 0 chr2 234750864 234750958 -15936896 + AluY SINE Alu 210 303 -8 200 172 17 35 chr2 234751126 234751184 -15936670 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 2146 154 70 47 chr2 234751242 234751730 -15936124 + MLT1D LTR MaLR 7 505 0 417 139 35 0 chr2 234752334 234752420 -15935434 + L1MC3 LINE L1 7553 7641 -144 453 212 0 12 chr2 234752466 234752551 -15935303 - FRAM SINE Alu -22 154 71 256 191 45 45 chr2 234752566 234752655 -15935199 + L1MC3 LINE L1 7681 7769 -16 333 384 52 7 chr2 234752681 234752988 -15934866 + L1M4 LINE L1 3526 3846 -2300 504 210 25 25 chr2 234754216 234754335 -15933519 - MIR SINE MIR -110 152 34 23 0 0 0 chr2 234754627 234754650 -15933204 + AT_rich Low_complexity Low_complexity 1 23 0 343 375 59 21 chr2 234755038 234755377 -15932477 - L2 LINE L2 -523 2791 2440 311 256 77 43 chr2 234755567 234755684 -15932170 + MER91C DNA MER1_type 20 140 0 5969 184 17 21 chr2 234755941 234757185 -15930669 - MER57-int LTR ERV1 -4182 3355 2117 1149 208 176 15 chr2 234757330 234757671 -15930183 + MSTD LTR MaLR 1 396 0 2337 90 0 10 chr2 234757784 234758084 -15929770 - AluSx SINE Alu -15 297 1 21 57 0 0 chr2 234758086 234758121 -15929733 + AT_rich Low_complexity Low_complexity 1 35 0 686 170 0 0 chr2 234758753 234758865 -15928989 - AluJb SINE Alu -7 305 194 244 255 0 0 chr2 234758965 234759016 -15928838 - AluJ/monomer SINE Alu -251 51 1 25 31 0 0 chr2 234759244 234759276 -15928578 + AT_rich Low_complexity Low_complexity 1 32 0 881 136 0 0 chr2 234759276 234759401 -15928453 - FLAM_C SINE Alu -18 125 1 2263 104 7 3 chr2 234759615 234759923 -15927931 - AluSp SINE Alu -4 309 1 1686 216 31 5 chr2 234760215 234760604 -15927250 - LTR10E LTR ERV1 -21 612 214 314 231 54 41 chr2 234762208 234762343 -15925511 + LTR40c LTR ERVL 203 345 -120 329 342 27 31 chr2 234762386 234762608 -15925246 + L2 LINE L2 2422 2642 -672 189 371 31 21 chr2 234762782 234762879 -15924975 - L2 LINE L2 -22 3250 3153 277 329 103 0 chr2 234763420 234763566 -15924288 - MIR SINE MIR -59 203 43 275 283 81 0 chr2 234764128 234764227 -15923627 + MIR SINE MIR 109 215 -47 2180 129 53 55 chr2 234765300 234765487 -15922367 + MSTB1 LTR MaLR 1 187 -245 2164 103 3 26 chr2 234765487 234765818 -15922036 - AluSp SINE Alu 0 313 1 2180 129 53 55 chr2 234765818 234766063 -15921791 + MSTB1 LTR MaLR 187 432 0 300 317 209 4 chr2 234766106 234766158 -15921696 - L2 LINE L2 -78 3194 3154 330 67 0 0 chr2 234766158 234766203 -15921651 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 300 317 209 4 chr2 234766203 234766399 -15921455 - L2 LINE L2 -118 3154 2895 2062 128 7 0 chr2 234766406 234766696 -15921158 + AluSx SINE Alu 1 292 -20 870 268 76 121 chr2 234766783 234767362 -15920492 - L2 LINE L2 -503 2811 2259 228 313 137 48 chr2 234768253 234768566 -15919288 + L2 LINE L2 2620 2960 -354 1573 239 46 83 chr2 234768730 234768937 -15918917 - MER20B DNA MER1_type 0 783 570 2001 153 0 3 chr2 234768937 234769238 -15918616 + AluSx SINE Alu 1 300 -12 1573 239 46 83 chr2 234769238 234769843 -15918011 - MER20B DNA MER1_type -213 570 1 201 283 0 0 chr2 234769843 234769889 -15917965 + L2 LINE L2 3225 3270 -2 309 307 64 29 chr2 234770534 234770674 -15917180 + MER5B DNA MER1_type 4 148 -30 284 339 8 8 chr2 234771814 234771935 -15915919 + LTR67 LTR ERVL 427 547 -10 307 207 103 11 chr2 234771986 234772073 -15915781 + MLT1K LTR MaLR 294 388 -200 1911 227 105 15 chr2 234772075 234772616 -15915238 + MLT1E LTR MaLR 4 593 0 720 136 8 0 chr2 234772820 234772945 -15914909 - L1MA3 LINE L1 0 6305 6180 278 83 0 0 chr2 234772946 234772994 -15914860 + L1MA3 LINE L1 6130 6177 -128 464 313 56 0 chr2 234773628 234773788 -15914066 - MIR SINE MIR -35 227 59 24 0 0 0 chr2 234776354 234776378 -15911476 + AT_rich Low_complexity Low_complexity 1 24 0 513 238 185 41 chr2 234776592 234776911 -15910943 - L1M4 LINE L1 -2872 3274 2910 574 156 98 33 chr2 234777353 234777475 -15910379 - L2 LINE L2 -5 3308 3179 1463 186 27 0 chr2 234777508 234777766 -15910088 + Tigger7 DNA MER2_type 3 267 -466 453 194 0 39 chr2 234777764 234777867 -15909987 + Tigger7 DNA MER2_type 2393 2491 0 * 325 241 103 14 chr2 234777893 234778038 -15909816 - L1ME4a LINE L1 -3 6118 5961 639 289 85 20 chr2 234778053 234778455 -15909399 - L1ME4a LINE L1 -194 5927 5500 1429 207 39 21 chr2 234780540 234780907 -15906947 + MLT1A2 LTR MaLR 4 504 -1 280 260 5 37 chr2 234780912 234781102 -15906752 + L1MC3 LINE L1 7517 7784 -1 2574 80 0 0 chr2 234781181 234781494 -15906360 - AluSq SINE Alu 0 313 1 607 323 84 43 chr2 234781732 234782221 -15905633 + L1ME4a LINE L1 5319 5827 -294 2034 141 55 22 chr2 234782337 234782700 -15905154 + THE1C LTR MaLR 1 375 0 340 348 82 19 chr2 234783325 234783483 -15904371 - MER5A DNA MER1_type 0 189 22 4192 169 31 7 chr2 234785329 234786163 -15901691 - L1MB7 LINE L1 -10 6174 5321 204 40 0 0 chr2 234786648 234786673 -15901181 + (A)n Simple_repeat Simple_repeat 1 25 0 592 210 32 57 chr2 234788146 234788303 -15899551 + MER58B DNA MER1_type 175 327 -14 1282 205 65 15 chr2 234788359 234788696 -15899158 - MLT1A1 LTR MaLR -2 363 10 27 29 0 0 chr2 234789283 234789317 -15898537 + AT_rich Low_complexity Low_complexity 1 34 0 351 0 0 0 chr2 234789590 234789629 -15898225 + (TG)n Simple_repeat Simple_repeat 2 40 0 188 266 81 32 chr2 234792536 234792660 -15895194 + L2 LINE L2 2628 2757 -557 310 296 65 0 chr2 234793137 234793245 -15894609 + L2 LINE L2 3196 3310 -3 209 83 28 0 chr2 234793682 234793718 -15894136 + (CA)n Simple_repeat Simple_repeat 1 37 0 4295 163 41 19 chr2 234793762 234794570 -15893284 - LTR1B LTR ERV1 0 826 1 401 113 0 16 chr2 234794695 234794757 -15893097 - Tigger7 DNA MER2_type -36 2451 2391 1269 206 43 0 chr2 234794760 234795013 -15892841 - Tigger7 DNA MER2_type -469 264 1 726 212 69 0 chr2 234796353 234796542 -15891312 - L1MA9 LINE L1 -776 5370 5169 * 5088 133 24 31 chr2 234796537 234797490 -15890364 + L1MA9 LINE L1 5362 6307 -5 319 274 122 43 chr2 234798502 234798732 -15889122 - L1MDa LINE L1 -4720 1820 1573 206 354 13 0 chr2 234798732 234798811 -15889043 + L2 LINE L2 3184 3263 -9 706 213 75 4 chr2 234800854 234801093 -15886761 + MER112 DNA MER1_type 1 256 0 535 240 118 22 chr2 234801286 234801759 -15886095 - MLT1G LTR MaLR -18 572 22 4878 193 64 59 chr2 234801997 234803443 -15884411 + Charlie1a DNA MER1_type 1 1454 -1 578 317 30 30 chr2 234803444 234803674 -15884180 + MIR SINE MIR 17 246 -16 357 315 102 74 chr2 234804896 234805248 -15882606 - L2 LINE L2 -11 3261 2900 870 225 127 75 chr2 234805284 234805723 -15882131 + MLT1D LTR MaLR 1 465 -2 1530 153 52 46 chr2 234805864 234806230 -15881624 + THE1C LTR MaLR 1 368 -7 2653 234 68 14 chr2 234806535 234807258 -15880596 + MER69 DNA AcHobo 6 767 -459 1576 234 169 3 chr2 234807293 234807950 -15879904 + MER69 DNA AcHobo 1761 2526 0 620 262 77 61 chr2 234808123 234808800 -15879054 + L1MC5 LINE L1 7172 7774 -187 27 0 0 0 chr2 234808827 234808854 -15879000 + AT_rich Low_complexity Low_complexity 1 27 0 32 91 0 0 chr2 234808879 234808967 -15878887 + AT_rich Low_complexity Low_complexity 1 88 0 2559 155 11 20 chr2 234809099 234809537 -15878317 + Tigger2a DNA MER2_type 1 434 0 360 191 117 0 chr2 234809860 234809954 -15877900 - MIR SINE MIR -98 164 60 230 297 102 39 chr2 234811695 234811823 -15876031 + MIR3 SINE MIR 4 139 -69 2363 100 0 3 chr2 234812074 234812384 -15875470 + AluSc SINE Alu 1 309 0 191 303 101 11 chr2 234812536 234812625 -15875229 - MIR SINE MIR -128 134 38 241 210 97 0 chr2 234813179 234813241 -15874613 + L1MB5 LINE L1 6099 6166 -8 475 250 9 0 chr2 234813545 234813653 -15874201 + MIR SINE MIR 38 146 -62 2324 91 3 3 chr2 234813721 234814029 -15873825 + AluSc SINE Alu 1 308 -1 2129 186 62 20 chr2 234814174 234814626 -15873228 + MER70A LTR ERVL 2 472 0 675 227 40 10 chr2 234814737 234814935 -15872919 - MLT1A1 LTR MaLR -161 204 1 2329 111 0 0 chr2 234815099 234815406 -15872448 + AluSx SINE Alu 1 307 -5 399 143 0 0 chr2 234816583 234816646 -15871208 + L1ME1 LINE L1 2658 2720 -3426 327 300 81 0 chr2 234816647 234816810 -15871044 + L1ME1 LINE L1 3777 3955 -2191 * 1405 207 57 21 chr2 234816806 234817227 -15870627 + L1ME1 LINE L1 4397 4832 -1314 10134 183 24 10 chr2 234817235 234818950 -15868904 - L1PB3 LINE L1 0 6154 4464 236 0 88 0 chr2 234818950 234818984 -15868870 + T-rich Low_complexity Low_complexity 3 39 0 10134 183 24 10 chr2 234818984 234820620 -15867234 - L1PB3 LINE L1 -1690 4464 2755 2986 243 43 29 chr2 234820621 234821940 -15865914 + L1ME1 LINE L1 4823 6163 -3 447 351 57 0 chr2 234822090 234822318 -15865536 + L1MC4a LINE L1 7175 7415 -393 1052 67 0 15 chr2 234822657 234822791 -15865063 - AluYb8 SINE Alu -186 132 1 322 238 38 12 chr2 234822795 234822875 -15864979 + L1MC4 LINE L1 7812 7893 -149 204 298 0 0 chr2 234822891 234822938 -15864916 + polypyrimidine Low_complexity Low_complexity 2 48 0 475 224 112 21 chr2 234822973 234823116 -15864738 - MER103 DNA DNA -10 156 1 28 29 0 0 chr2 234823227 234823262 -15864592 + AT_rich Low_complexity Low_complexity 1 35 0 855 273 91 29 chr2 234823369 234823786 -15864068 - L1ME4a LINE L1 -187 5934 5492 7668 152 23 5 chr2 234823790 234825009 -15862845 + L1MA3 LINE L1 3 1243 -6322 * 15022 149 42 16 chr2 234825000 234825997 -15861857 + L1MA3 LINE L1 2247 3216 -4508 192 77 0 0 chr2 234825997 234826023 -15861831 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 15022 149 42 16 chr2 234826023 234826382 -15861472 + L1MA3 LINE L1 3216 3564 -4160 2592 68 0 0 chr2 234826382 234826693 -15861161 + AluY SINE Alu 1 311 0 15022 149 42 16 chr2 234826693 234828764 -15859090 + L1MA3 LINE L1 3564 5579 -2145 216 0 0 0 chr2 234828764 234828788 -15859066 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 15022 149 42 16 chr2 234828788 234830705 -15857149 + L1MA3 LINE L1 5579 7724 0 27 0 0 0 chr2 234831005 234831032 -15856822 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr2 234831519 234831544 -15856310 + AT_rich Low_complexity Low_complexity 1 25 0 25 65 0 0 chr2 234831753 234831799 -15856055 + AT_rich Low_complexity Low_complexity 1 46 0 281 324 39 10 chr2 234832438 234832540 -15855314 - MER5A DNA MER1_type 0 189 85 1461 238 148 38 chr2 234832583 234833078 -15854776 + MLT1H LTR MaLR 1 549 0 235 347 71 20 chr2 234833237 234833335 -15854519 + L2 LINE L2 3147 3249 -23 223 286 92 61 chr2 234833571 234833669 -15854185 + L2 LINE L2 2942 3042 -230 577 323 115 11 chr2 234834036 234834383 -15853471 - L1MC4a LINE L1 -1889 5919 5537 294 169 28 42 chr2 234834544 234834615 -15853239 - MLT1K LTR MaLR 0 588 519 2217 109 0 3 chr2 234835074 234835378 -15852476 + AluSx SINE Alu 1 303 -9 2307 172 27 48 chr2 234835884 234836111 -15851743 + Tigger2a DNA MER2_type 1 216 -2492 2232 118 3 3 chr2 234836111 234836415 -15851439 - AluSq SINE Alu -5 308 5 2307 172 27 48 chr2 234836415 234836629 -15851225 + Tigger2a DNA MER2_type 216 433 -1 1119 241 193 17 chr2 234837345 234837764 -15850090 + L2 LINE L2 1908 2400 -914 1694 210 69 88 chr2 234837776 234838367 -15849487 + MLT1G LTR MaLR 11 590 0 934 251 84 29 chr2 234838370 234838645 -15849209 + L2 LINE L2 2404 2693 -621 938 144 0 9 chr2 234838649 234838857 -15848997 - AluY SINE Alu -19 292 1 944 267 47 11 chr2 234838857 234839134 -15848720 + L2 LINE L2 2687 2973 -341 21 82 0 0 chr2 234839380 234839429 -15848425 + AT_rich Low_complexity Low_complexity 1 49 0 547 195 71 120 chr2 234839845 234840112 -15847742 - MER112 DNA MER1_type -2 254 1 336 274 75 70 chr2 234840228 234840414 -15847440 - MER5A DNA MER1_type 0 189 3 186 43 0 0 chr2 234840836 234840859 -15846995 + (GA)n Simple_repeat Simple_repeat 2 24 0 26 30 0 0 chr2 234841235 234841268 -15846586 + AT_rich Low_complexity Low_complexity 1 33 0 2096 125 7 0 chr2 234841415 234841729 -15846125 + AluSx SINE Alu 1 316 0 870 213 6 0 chr2 234841890 234842050 -15845804 - FRAM SINE Alu -14 162 2 238 259 43 95 chr2 234842569 234842685 -15845169 - MER5B DNA MER1_type 0 178 69 249 229 36 60 chr2 234842954 234843037 -15844817 + MER5A DNA MER1_type 29 109 -80 24 0 0 0 chr2 234843126 234843150 -15844704 + AT_rich Low_complexity Low_complexity 1 24 0 218 286 143 0 chr2 234843352 234843443 -15844411 + L2 LINE L2 3196 3299 -14 225 0 0 0 chr2 234843592 234843617 -15844237 + (CA)n Simple_repeat Simple_repeat 1 25 0 217 217 0 0 chr2 234845509 234845555 -15842299 + CT-rich Low_complexity Low_complexity 3 48 0 187 30 30 30 chr2 234847223 234847256 -15840598 + (GGA)n Simple_repeat Simple_repeat 2 34 0 333 100 0 0 chr2 234847504 234847554 -15840300 + (CAG)n Simple_repeat Simple_repeat 3 52 0 314 335 73 84 chr2 234848310 234848597 -15839257 - L1M2 LINE L1 -5806 1043 760 207 0 0 0 chr2 234850188 234850211 -15837643 + (CAG)n Simple_repeat Simple_repeat 1 23 0 189 0 0 0 chr2 234850778 234850799 -15837055 + (CAG)n Simple_repeat Simple_repeat 2 22 0 189 147 0 0 chr2 234854729 234854763 -15833091 + (A)n Simple_repeat Simple_repeat 1 34 0 352 259 56 97 chr2 234855064 234855280 -15832574 - L1M2 LINE L1 -5876 973 767 575 273 24 6 chr2 234856597 234856762 -15831092 + MIR3 SINE MIR 20 187 -21 187 374 73 16 chr2 234861296 234861419 -15826435 - L2 LINE L2 -86 3186 3057 1209 266 134 10 chr2 234861492 234861886 -15825968 + MLT1H LTR MaLR 107 549 0 2429 120 50 75 chr2 234861907 234861966 -15825888 + MSTB1 LTR MaLR 1 60 -372 1927 140 32 0 chr2 234861966 234862251 -15825603 - AluSx SINE Alu -18 294 1 2429 120 50 75 chr2 234862251 234862634 -15825220 + MSTB1 LTR MaLR 60 432 0 343 284 83 0 chr2 234862968 234863077 -15824777 + MIR SINE MIR 63 180 -82 183 156 0 0 chr2 234863266 234863298 -15824556 + (TATATG)n Simple_repeat Simple_repeat 3 34 0 391 287 21 35 chr2 234864277 234864420 -15823434 - L2 LINE L2 0 3313 3173 845 328 49 40 chr2 234865090 234865645 -15822209 + L2 LINE L2 2333 2892 -422 207 250 28 42 chr2 234865731 234865788 -15822066 + L2 LINE L2 3196 3253 -19 2159 161 3 31 chr2 234865788 234866142 -15821712 + MER2 DNA MER2_type 1 344 0 207 250 28 42 chr2 234866142 234866156 -15821698 + L2 LINE L2 3253 3266 -6 994 78 78 0 chr2 234867231 234867360 -15820494 + MER85 DNA T2_type 1 139 0 3725 166 62 15 chr2 234867385 234868114 -15819740 - L1MB7 LINE L1 -22 6162 5400 240 212 0 0 chr2 234868158 234868224 -15819630 + (CA)n Simple_repeat Simple_repeat 2 67 0 28 0 0 0 chr2 234869118 234869146 -15818708 + AT_rich Low_complexity Low_complexity 1 28 0 1733 174 17 0 chr2 234869804 234870091 -15817763 - AluJo SINE Alu -16 296 5 703 252 63 83 chr2 234870604 234870701 -15817153 + MIR SINE MIR 6 103 -159 2223 107 0 26 chr2 234870701 234871010 -15816844 - AluSx SINE Alu -11 301 1 703 252 63 83 chr2 234871010 234871166 -15816688 + MIR SINE MIR 103 254 -8 1315 191 49 0 chr2 234872252 234872372 -15815482 + AluJo SINE Alu 1 114 -198 423 0 0 0 chr2 234872372 234872419 -15815435 + (TAA)n Simple_repeat Simple_repeat 2 48 0 1315 191 49 0 chr2 234872419 234872523 -15815331 + AluJo SINE Alu 114 236 -76 30 27 0 0 chr2 234872533 234872570 -15815284 + AT_rich Low_complexity Low_complexity 1 37 0 1311 209 37 13 chr2 234872632 234872982 -15814872 - MLT1A1 LTR MaLR 0 365 13 223 328 46 46 chr2 234875068 234875199 -15812655 + MIR SINE MIR 14 144 -118 477 213 33 8 chr2 234875271 234875393 -15812461 - LTR16C LTR ERVL 0 491 367 324 246 0 0 chr2 234875458 234875519 -15812335 - LTR16C LTR ERVL -144 347 287 238 165 12 12 chr2 234875524 234875609 -15812245 + (TA)n Simple_repeat Simple_repeat 2 86 0 652 273 55 36 chr2 234876041 234876294 -15811560 + MIR SINE MIR 5 262 0 324 228 79 0 chr2 234876396 234876497 -15811357 - MIR SINE MIR -26 236 128 751 234 77 40 chr2 234876575 234876849 -15811005 - L1MCb LINE L1 -5761 284 1 2154 113 13 23 chr2 234878551 234878860 -15808994 - AluSq SINE Alu -7 306 1 260 252 219 0 chr2 234879866 234879985 -15807869 + MIR SINE MIR 60 204 -58 12095 131 37 2 chr2 234881253 234884021 -15803833 + L1PA11 LINE L1 3359 6174 0 1062 188 0 0 chr2 234884021 234884197 -15803657 + AluJb SINE Alu 134 309 -3 341 315 49 43 chr2 234884650 234884834 -15803020 + MIR SINE MIR 38 222 -40 22 0 0 0 chr2 234886635 234886657 -15801197 + AT_rich Low_complexity Low_complexity 1 22 0 373 299 134 21 chr2 234886715 234886909 -15800945 - MIR SINE MIR -9 253 38 1654 131 16 0 chr2 234887528 234887772 -15800082 + AluSx SINE Alu 43 290 -22 627 186 174 42 chr2 234888226 234888393 -15799461 - MER5A DNA MER1_type 0 189 1 933 87 0 24 chr2 234890109 234890235 -15797619 + FLAM_C SINE Alu 2 124 -9 2178 83 21 0 chr2 234890243 234890531 -15797323 + AluSx SINE Alu 1 294 -18 2640 231 106 40 chr2 234892235 234892337 -15795517 + L1ME1 LINE L1 2294 2388 -3758 1739 102 41 12 chr2 234892337 234892583 -15795271 - AluSq SINE Alu -60 253 1 2640 231 106 40 chr2 234892583 234893580 -15794274 + L1ME1 LINE L1 2388 3465 -2681 1394 185 124 41 chr2 234893582 234894012 -15793842 - MLT1C LTR MaLR -8 618 1 1138 213 76 30 chr2 234894052 234894350 -15793504 + L1ME1 LINE L1 3497 3780 -2386 1566 197 17 10 chr2 234894350 234894644 -15793210 + AluJo SINE Alu 1 296 -16 834 206 25 0 chr2 234894654 234894814 -15793040 + FAM SINE Alu 5 168 -7 1138 213 76 30 chr2 234894814 234894867 -15792987 + L1ME1 LINE L1 3788 3837 -2329 1790 157 64 14 chr2 234894867 234895211 -15792643 - MLT1A1 LTR MaLR 0 365 5 1138 213 76 30 chr2 234895211 234897367 -15790487 + L1ME1 LINE L1 3837 6161 -5 1708 178 16 23 chr2 234898055 234898358 -15789496 + AluJb SINE Alu 1 301 -11 2350 103 0 0 chr2 234898500 234898802 -15789052 + AluY SINE Alu 1 302 -9 21 36 0 0 chr2 234899237 234899265 -15788589 + AT_rich Low_complexity Low_complexity 1 28 0 235 293 27 0 chr2 234899330 234899405 -15788449 + MIR SINE MIR 186 262 0 383 221 105 0 chr2 234899451 234899546 -15788308 - MIR SINE MIR -102 160 56 425 192 108 39 chr2 234901027 234901157 -15786697 - L1MC4 LINE L1 -2 8040 7902 236 164 16 33 chr2 234901158 234901219 -15786635 + (TATATG)n Simple_repeat Simple_repeat 2 61 0 1474 178 84 79 chr2 234901272 234901666 -15786188 + MSTD LTR MaLR 1 396 0 275 200 122 33 chr2 234901686 234901776 -15786078 - L1MC4 LINE L1 -142 7900 7803 1557 211 14 47 chr2 234901962 234902182 -15785672 - MLT1A1 LTR MaLR 0 365 160 1957 149 7 10 chr2 234902182 234902477 -15785377 - AluSx SINE Alu -18 294 1 1557 211 14 47 chr2 234902477 234902621 -15785233 - MLT1A1 LTR MaLR -205 160 13 2258 126 3 0 chr2 234902659 234902968 -15784886 - AluSx SINE Alu -2 310 1 499 285 81 43 chr2 234903238 234903424 -15784430 + MIR3 SINE MIR 14 206 -2 23 78 0 0 chr2 234903551 234903602 -15784252 + AT_rich Low_complexity Low_complexity 1 51 0 35 24 0 0 chr2 234903770 234903812 -15784042 + AT_rich Low_complexity Low_complexity 1 42 0 234 300 92 8 chr2 234904108 234904228 -15783626 + MIR SINE MIR 132 261 -1 1350 142 110 78 chr2 234904514 234904795 -15783059 - AluJo SINE Alu -22 290 1 229 259 284 0 chr2 234905136 234905252 -15782602 - MIR SINE MIR -68 194 46 180 0 0 0 chr2 234905323 234905343 -15782511 + (A)n Simple_repeat Simple_repeat 1 20 0 899 150 84 0 chr2 234905669 234905836 -15782018 - L1MC1 LINE L1 -9 6324 6144 321 216 0 14 chr2 234906196 234906270 -15781584 - Charlie8 DNA MER1_type -1000 1417 1345 340 213 87 120 chr2 234906347 234906454 -15781400 - Charlie8 DNA MER1_type -69 261 159 2394 90 3 0 chr2 234906454 234906766 -15781088 - AluSq SINE Alu 0 313 1 340 213 87 120 chr2 234906766 234906808 -15781046 - Charlie8 DNA MER1_type -171 159 117 225 0 0 0 chr2 234906922 234906947 -15780907 + (A)n Simple_repeat Simple_repeat 1 25 0 185 263 213 38 chr2 234907221 234907301 -15780553 - MER5A DNA MER1_type -27 162 69 1935 140 11 0 chr2 234908199 234908485 -15779369 - AluSx SINE Alu -23 289 1 754 254 75 8 chr2 234910101 234910341 -15777513 + MARNA DNA Mariner 262 517 -69 475 104 13 0 chr2 234911365 234911442 -15776412 + MADE1 DNA Mariner 3 80 0 287 343 9 9 chr2 234911768 234911873 -15775981 - L2 LINE L2 -1 3312 3208 3572 31 0 0 chr2 234912304 234912725 -15775129 + L1PA2 LINE L1 5732 6152 -3 570 157 0 22 chr2 234916930 234917064 -15770790 + (TG)n Simple_repeat Simple_repeat 2 132 0 213 180 0 0 chr2 234917063 234917113 -15770741 + (TA)n Simple_repeat Simple_repeat 1 50 0 * 238 264 23 0 chr2 234917114 234917201 -15770653 + L1MC4 LINE L1 6614 6702 -1340 2249 88 0 10 chr2 234918637 234918934 -15768920 + AluSg1 SINE Alu 1 294 -15 266 270 67 0 chr2 234918947 234919036 -15768818 - MER5A DNA MER1_type -90 99 5 341 263 30 141 chr2 234919051 234919249 -15768605 + MER5B DNA MER1_type 3 178 0 187 245 122 71 chr2 234919280 234919378 -15768476 + MER5A DNA MER1_type 87 189 0 1551 221 3 7 chr2 234919595 234919884 -15767970 + AluJb SINE Alu 1 288 -24 33 25 0 0 chr2 234919884 234919924 -15767930 + AT_rich Low_complexity Low_complexity 1 40 0 231 228 163 0 chr2 234920380 234920472 -15767382 - MIR SINE MIR 0 262 156 1921 155 3 29 chr2 234920531 234920840 -15767014 - AluSx SINE Alu -11 301 1 237 108 0 0 chr2 234921908 234921945 -15765909 + (TA)n Simple_repeat Simple_repeat 2 38 0 27 0 0 0 chr2 234922067 234922094 -15765760 + AT_rich Low_complexity Low_complexity 1 27 0 1005 189 78 0 chr2 234922182 234922373 -15765481 + MER58A DNA MER1_type 19 224 0 202 182 204 0 chr2 234923102 234923146 -15764708 - MIR SINE MIR -162 100 48 504 147 22 0 chr2 234923490 234923626 -15764228 + (CA)n Simple_repeat Simple_repeat 2 140 0 339 352 29 9 chr2 234923981 234924086 -15763768 + MIR SINE MIR 43 149 -59 1569 170 48 4 chr2 234925078 234925377 -15762477 + AluJo SINE Alu 1 311 0 2058 128 0 3 chr2 234925835 234926132 -15761722 + AluSx SINE Alu 1 296 -16 343 326 51 23 chr2 234926409 234926584 -15761270 + MIR SINE MIR 70 249 -13 302 278 11 11 chr2 234928226 234928316 -15759538 + CT-rich Low_complexity Low_complexity 3 92 0 435 295 171 26 chr2 234928530 234928876 -15758978 + L2 LINE L2 2918 3313 0 205 293 37 24 chr2 234929020 234929102 -15758752 - MIR SINE MIR -66 142 60 2024 25 16 4 chr2 234929339 234929582 -15758272 + L1PA3 LINE L1 5910 6155 0 2244 108 0 0 chr2 234929722 234930008 -15757846 - AluSx SINE Alu -26 286 1 2380 102 0 3 chr2 234930606 234930920 -15756934 + AluSq SINE Alu 1 313 0 690 210 122 111 chr2 234931121 234931564 -15756290 - MLT1H LTR MaLR 0 549 102 210 280 254 8 chr2 234931785 234931903 -15755951 - L2 LINE L2 -9 3304 3158 1985 151 3 0 chr2 234932312 234932611 -15755243 - AluSx SINE Alu -12 300 1 27 81 0 0 chr2 234933299 234933361 -15754493 + AT_rich Low_complexity Low_complexity 1 62 0 378 0 0 0 chr2 234933422 234933464 -15754390 + (TG)n Simple_repeat Simple_repeat 2 43 0 22 0 0 0 chr2 234934000 234934022 -15753832 + AT_rich Low_complexity Low_complexity 1 22 0 248 0 31 0 chr2 234934898 234934930 -15752924 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 2185 108 0 3 chr2 234934931 234935219 -15752635 - AluSg SINE Alu -23 287 1 325 333 0 9 chr2 234936246 234936357 -15751497 - L2 LINE L2 -11 3302 3193 386 333 47 0 chr2 234936928 234937078 -15750776 - L3b LINE CR1 -135 1448 1292 28 29 0 0 chr2 234937309 234937344 -15750510 + AT_rich Low_complexity Low_complexity 1 35 0 2203 123 22 27 chr2 234937434 234937800 -15750054 - THE1B LTR MaLR 0 364 1 9267 154 43 33 chr2 234938001 234938430 -15749424 - L1MC3 LINE L1 -1 7784 7361 1968 134 4 0 chr2 234938430 234938705 -15749149 - AluSx SINE Alu -36 276 1 9267 154 43 33 chr2 234938705 234939315 -15748539 - L1MC3 LINE L1 -424 7361 6759 1993 146 12 12 chr2 234939315 234939658 -15748196 - MER2 DNA MER2_type 0 344 2 9267 154 43 33 chr2 234939658 234940618 -15747236 - L1MC3 LINE L1 -1026 6759 5764 300 338 78 19 chr2 234940618 234940772 -15747082 - L3b LINE CR1 -293 1290 1128 22 0 0 0 chr2 234942629 234942651 -15745203 + AT_rich Low_complexity Low_complexity 1 22 0 282 286 115 36 chr2 234942889 234943056 -15744798 + MIR SINE MIR 27 207 -55 232 178 27 0 chr2 234943661 234943734 -15744120 + (TA)n Simple_repeat Simple_repeat 2 76 0 579 175 58 0 chr2 234944309 234944412 -15743442 - FRAM SINE Alu -30 146 38 325 335 11 85 chr2 234944431 234944619 -15743235 - MIR3 SINE MIR -15 193 20 376 281 104 26 chr2 234944756 234944948 -15742906 - L2 LINE L2 -1 3312 3106 1905 82 8 0 chr2 234946394 234946639 -15741215 + AluSq SINE Alu 2 248 -65 25 51 0 0 chr2 234946852 234946891 -15740963 + AT_rich Low_complexity Low_complexity 1 39 0 375 271 199 74 chr2 234946916 234947391 -15740463 - L2 LINE L2 0 3313 2749 2117 123 7 3 chr2 234948865 234949165 -15738689 + AluSx SINE Alu 1 301 -11 369 0 0 0 chr2 234949165 234949206 -15738648 + (TA)n Simple_repeat Simple_repeat 1 41 0 669 211 9 0 chr2 234950092 234950206 -15737648 + FLAM_A SINE Alu 1 115 -18 189 0 0 0 chr2 234950207 234950228 -15737626 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 1638 201 7 3 chr2 234950771 234951064 -15736790 - AluJo SINE Alu -18 294 1 440 128 0 26 chr2 234952547 234952625 -15735229 - MADE1 DNA Mariner -3 77 2 818 166 140 10 chr2 234952650 234952843 -15735011 + MER58A DNA MER1_type 1 218 -6 237 326 63 0 chr2 234953905 234954000 -15733854 + MER91C DNA MER1_type 16 116 -24 1689 172 10 10 chr2 234955140 234955431 -15732423 - AluJb SINE Alu -20 292 2 1557 140 4 8 chr2 234957938 234958173 -15729681 - AluSx SINE Alu -78 234 1 2087 101 4 0 chr2 234958499 234958822 -15729032 - AluSc SINE Alu 0 324 1 440 307 52 42 chr2 234960914 234961106 -15726748 + MIR SINE MIR 46 239 -23 1830 140 37 4 chr2 234961361 234961633 -15726221 + AluJb SINE Alu 1 281 -31 261 0 0 0 chr2 234961634 234961663 -15726191 + (CAAT)n Simple_repeat Simple_repeat 2 30 0 501 242 76 0 chr2 234962513 234962670 -15725184 - MIR SINE MIR -34 228 60 1126 30 0 8 chr2 234963921 234964052 -15723802 + AluY SINE Alu 1 130 -181 2398 101 3 0 chr2 234964631 234964937 -15722917 - AluSq SINE Alu -6 307 1 2099 128 3 7 chr2 234966454 234966759 -15721095 - AluSx SINE Alu -8 304 1 680 200 0 105 chr2 234966933 234967123 -15720731 - MER20 DNA MER1_type -48 171 2 532 140 74 20 chr2 234967300 234967422 -15720432 - MLT1A2 LTR MaLR 0 374 257 189 0 0 0 chr2 234967640 234967661 -15720193 + (T)n Simple_repeat Simple_repeat 1 21 0 285 355 37 0 chr2 234967762 234967869 -15719985 - MIR SINE MIR -71 191 81 1764 157 83 6 chr2 234968608 234968921 -15718933 - MER1B DNA MER1_type 0 337 1 2187 122 0 0 chr2 234969874 234970169 -15717685 + AluSx SINE Alu 1 295 -17 443 18 18 0 chr2 234971561 234971617 -15716237 + (TG)n Simple_repeat Simple_repeat 2 58 0 285 56 0 0 chr2 235172511 235172571 -15515283 - AluSp/q SINE Alu 0 306 247 270 325 0 0 chr2 235173371 235173448 -15514406 + MER5B DNA MER1_type 1 77 -101 337 279 171 0 chr2 235174193 235174333 -15513521 - MER102b DNA MER1_type 0 341 178 523 59 0 0 chr2 235175076 235175144 -15512710 + Alu SINE Alu 232 299 -10 2127 129 16 0 chr2 235175598 235175901 -15511953 + AluSx SINE Alu 1 308 -4 1860 22 0 31 chr2 235175933 235176156 -15511698 + L1PA5 LINE L1 5823 6038 -116 321 186 87 134 chr2 235176256 235176279 -15511575 + MER20B DNA MER1_type 564 587 -196 1945 149 3 7 chr2 235176279 235176580 -15511274 - AluSx SINE Alu -12 300 1 321 186 87 134 chr2 235176580 235176787 -15511067 + MER20B DNA MER1_type 587 783 0 203 200 0 20 chr2 235178026 235178076 -15509778 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 759 205 78 91 chr2 235179035 235179363 -15508491 - L1ME3A LINE L1 -49 6912 6586 375 232 21 11 chr2 235179363 235179458 -15508396 - MIR SINE MIR -119 143 48 893 63 0 0 chr2 235179764 235179875 -15507979 + L1PB3 LINE L1 6044 6154 0 1567 207 57 21 chr2 235179883 235180304 -15507550 - L1ME3A LINE L1 -1314 5627 5192 374 288 78 5 chr2 235180275 235180463 -15507391 - L1ME3A LINE L1 -2169 4772 4572 * 588 217 29 14 chr2 235180464 235180602 -15507252 - L1ME3A LINE L1 -3426 3515 3376 930 288 65 9 chr2 235180669 235181006 -15506848 - L1ME3A LINE L1 -5252 1171 816 1781 122 88 34 chr2 235181099 235181419 -15506435 - THE1C LTR MaLR -5 370 34 255 368 50 16 chr2 235182210 235182392 -15505462 + MIR3 SINE MIR 20 207 -1 * 678 292 22 22 chr2 235182365 235182591 -15505263 + MIR SINE MIR 29 254 -8 2114 112 0 3 chr2 235182691 235182977 -15504877 + AluSc SINE Alu 1 285 -24 209 206 14 55 chr2 235183434 235183507 -15504347 + (GGGTG)n Simple_repeat Simple_repeat 1 70 0 259 307 53 18 chr2 235185653 235185767 -15502087 + L2 LINE L2 3182 3299 -14 1087 85 92 0 chr2 235187338 235187491 -15500363 + AluSq SINE Alu 140 306 -7 2278 87 4 0 chr2 235188401 235188701 -15499153 + AluSq SINE Alu 5 305 0 224 279 267 0 chr2 235188964 235189050 -15498804 + MER5A DNA MER1_type 74 182 -7 211 250 0 19 chr2 235189113 235189165 -15498689 - MER5B DNA MER1_type -10 168 118 297 122 0 0 chr2 235189337 235189378 -15498476 + MER57A LTR ERV1 297 337 -66 236 283 33 0 chr2 235189382 235189474 -15498380 - L1ME3A LINE L1 -6305 118 24 2075 149 39 3 chr2 235189757 235190092 -15497762 + MER7A DNA MER2_type 2 346 0 295 320 84 51 chr2 235191194 235191372 -15496482 + MIR3 SINE MIR 18 201 -7 924 211 11 5 chr2 235191623 235191808 -15496046 - MER20B DNA MER1_type -3 216 31 333 274 30 44 chr2 235192082 235192217 -15495637 - L1ME4a LINE L1 -269 5852 5720 652 228 29 18 chr2 235192395 235192566 -15495288 - MER5A DNA MER1_type -3 186 14 2302 110 0 7 chr2 235192689 235192997 -15494857 + AluSx SINE Alu 1 306 -6 919 134 5 98 chr2 235192997 235193191 -15494663 + AluSg/x SINE Alu 135 310 0 281 275 25 29 chr2 235193191 235193374 -15494480 + MIR SINE MIR 21 262 0 533 144 19 10 chr2 235193501 235193605 -15494249 + MER5A DNA MER1_type 1 105 -84 1775 170 19 75 chr2 235194163 235194575 -15493279 - MLT1B LTR MaLR -1 389 1 258 81 0 0 chr2 235194589 235194626 -15493228 + (GA)n Simple_repeat Simple_repeat 2 38 0 25 0 0 0 chr2 235195590 235195615 -15492239 + AT_rich Low_complexity Low_complexity 1 25 0 292 216 104 72 chr2 235197051 235197176 -15490678 + L2 LINE L2 3180 3308 -5 17793 24 2 0 chr2 235198410 235200974 -15486880 - L1PA3 LINE L1 -279 5876 3310 718 268 76 121 chr2 235201186 235201765 -15486089 + L2 LINE L2 2259 2811 -503 2080 128 7 0 chr2 235201852 235202142 -15485712 - AluSx SINE Alu -20 292 1 232 306 88 0 chr2 235202149 235202296 -15485558 + L2 LINE L2 2895 3054 -218 330 67 0 0 chr2 235202345 235202390 -15485464 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 228 154 19 39 chr2 235202390 235202442 -15485412 + L2 LINE L2 3185 3235 -78 2225 129 53 55 chr2 235202485 235202730 -15485124 - MSTB1 LTR MaLR 0 432 187 2185 103 3 26 chr2 235202730 235203061 -15484793 + AluSp SINE Alu 1 313 0 2225 129 53 55 chr2 235203061 235203248 -15484606 - MSTB1 LTR MaLR -245 187 1 2047 82 25 16 chr2 235203753 235204068 -15483786 + L1P LINE L1 4383 4700 -1446 249 289 0 53 chr2 235204212 235204288 -15483566 - MIR SINE MIR -171 91 20 1418 179 13 65 chr2 235204371 235204678 -15483176 - MLT1B LTR MaLR 0 390 100 3028 163 47 13 chr2 235204683 235205927 -15481927 - L1MA8 LINE L1 -19 6272 4932 685 199 0 0 chr2 235205927 235206058 -15481796 - MLT1B LTR MaLR -259 131 1 279 201 27 212 chr2 235206585 235206769 -15481085 - MER5B DNA MER1_type -2 176 27 1979 136 34 0 chr2 235206914 235207208 -15480646 - AluSx SINE Alu -8 304 1 202 209 23 0 chr2 235207413 235207456 -15480398 + GA-rich Low_complexity Low_complexity 1 44 0 234 312 130 0 chr2 235208674 235208751 -15479103 - L2 LINE L2 -3 3269 3183 183 175 119 140 chr2 235209327 235209470 -15478384 - L2 LINE L2 -182 3131 2992 1440 124 47 30 chr2 235209990 235210224 -15477630 + THE1B LTR MaLR 127 364 0 2024 99 4 0 chr2 235210244 235210506 -15477348 - AluY SINE Alu -2 309 47 251 296 202 10 chr2 235210765 235210968 -15476886 + MIR SINE MIR 16 257 -5 1744 186 13 0 chr2 235211051 235211352 -15476502 + AluJo SINE Alu 1 305 -7 227 324 29 0 chr2 235211510 235211612 -15476242 - MIR SINE MIR -66 196 92 236 359 28 14 chr2 235212503 235212645 -15475209 - MIR SINE MIR -111 151 8 290 326 45 0 chr2 235213239 235213328 -15474526 - L2 LINE L2 -37 3276 3184 672 93 8 34 chr2 235214330 235214361 -15473493 + L1MA9 LINE L1 6194 6224 -88 192 40 0 0 chr2 235214361 235214386 -15473468 + (CA)n Simple_repeat Simple_repeat 2 26 0 672 93 8 34 chr2 235214386 235214472 -15473382 + L1MA9 LINE L1 6224 6308 -4 228 324 0 0 chr2 235216183 235216257 -15471597 - MIR3 SINE MIR -31 177 104 181 219 62 47 chr2 235217562 235217626 -15470228 + MIR SINE MIR 83 147 -61 181 288 15 15 chr2 235217686 235217752 -15470102 - L2 LINE L2 -61 3211 3146 813 250 37 48 chr2 235218030 235218298 -15469556 - MLT2B3 LTR ERVL -7 547 283 277 362 136 9 chr2 235222153 235222374 -15465480 - L2 LINE L2 -41 3231 2983 857 247 27 0 chr2 235223067 235223290 -15464564 + AluSx SINE Alu 1 229 -83 2348 71 0 0 chr2 235223786 235224095 -15463759 + AluY SINE Alu 1 282 -29 206 125 31 0 chr2 235224574 235224606 -15463248 + L2 LINE L2 3195 3227 -86 603 198 0 25 chr2 235224922 235225041 -15462813 - MER5B DNA MER1_type 0 178 63 610 211 16 105 chr2 235225041 235225231 -15462623 + MER5B DNA MER1_type 1 173 -5 501 208 47 0 chr2 235225292 235225398 -15462456 - MER5A DNA MER1_type -76 113 3 2252 110 3 7 chr2 235225399 235225708 -15462146 + AluSx SINE Alu 1 308 -4 423 302 56 71 chr2 235225837 235225974 -15461880 - MIR SINE MIR -1 261 128 2305 97 20 0 chr2 235225974 235226274 -15461580 + AluSc SINE Alu 4 309 0 423 302 56 71 chr2 235226274 235226388 -15461466 - MIR SINE MIR -134 128 14 743 161 0 0 chr2 235226531 235226649 -15461205 - MLT1A2 LTR MaLR -256 118 1 215 238 238 56 chr2 235227656 235227782 -15460072 + MER5A DNA MER1_type 1 149 -29 2460 186 82 9 chr2 235227992 235228531 -15459323 + L1MD3 LINE L1 7410 7987 -8 7104 63 15 6 chr2 235228531 235229416 -15458438 + L1PA8 LINE L1 5279 6171 -1 202 227 92 20 chr2 235229695 235229797 -15458057 - MIR3 SINE MIR -53 155 37 494 228 44 63 chr2 235229847 235230005 -15457849 + MER5A DNA MER1_type 35 189 0 1021 199 60 45 chr2 235231132 235231399 -15456455 + MLT1A2 LTR MaLR 104 374 0 272 297 77 26 chr2 235232336 235232491 -15455363 - MER5A DNA MER1_type -26 163 1 266 164 194 15 chr2 235232792 235232859 -15454995 + L2 LINE L2 3193 3271 -1 315 220 0 0 chr2 235234035 235234126 -15453728 + (TG)n Simple_repeat Simple_repeat 1 91 0 2293 87 3 0 chr2 235234247 235234534 -15453320 - L1PA6 LINE L1 -3 6151 5864 311 317 93 33 chr2 235235052 235235235 -15452619 - MIR3 SINE MIR -2 206 13 476 247 149 7 chr2 235235319 235235473 -15452381 + MIR SINE MIR 21 196 -66 348 319 43 38 chr2 235235536 235235771 -15452083 + L2 LINE L2 2383 2618 -696 653 230 60 36 chr2 235235780 235236048 -15451806 + MLT2B3 LTR ERVL 1 265 -188 368 209 86 19 chr2 235236071 235236176 -15451678 + MER61A LTR ERV1 1 112 -231 188 245 11 117 chr2 235237602 235237696 -15450158 - L2 LINE L2 0 3313 3230 6925 88 39 0 chr2 235238319 235239311 -15448543 - L1PA12 LINE L1 0 6168 5164 11575 133 17 27 chr2 235239313 235241231 -15446623 + L1PA12 LINE L1 3289 5187 -959 31 44 0 0 chr2 235241460 235241505 -15446349 + AT_rich Low_complexity Low_complexity 1 45 0 243 317 24 0 chr2 235241569 235241651 -15446203 - MIR3 SINE MIR -5 203 120 1461 158 32 14 chr2 235241827 235242012 -15445842 - AluSx SINE Alu -4 308 115 198 0 0 0 chr2 235242012 235242034 -15445820 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1461 158 32 14 chr2 235242034 235242127 -15445727 - AluSx SINE Alu -197 115 25 268 316 21 34 chr2 235242753 235242884 -15444970 - MIR SINE MIR -86 122 17 2440 77 0 3 chr2 235243065 235243362 -15444492 - AluY SINE Alu -15 296 1 24 0 0 0 chr2 235243543 235243567 -15444287 + AT_rich Low_complexity Low_complexity 1 24 0 288 0 0 0 chr2 235245970 235246002 -15441852 + (TTA)n Simple_repeat Simple_repeat 3 34 0 7067 71 13 0 chr2 235246002 235247296 -15440558 - L1PA7 LINE L1 -18 6136 4727 2570 105 472 7 chr2 235247293 235247882 -15439972 + L1P LINE L1 3114 3976 -2170 * 5011 27 0 0 chr2 235247880 235248464 -15439390 - L1PA2 LINE L1 -946 5200 4617 8109 17 10 1 chr2 235248464 235249401 -15438453 + L1PA2 LINE L1 5211 6155 0 25 0 0 0 chr2 235249411 235249436 -15438418 + AT_rich Low_complexity Low_complexity 1 25 0 2662 136 43 2 chr2 235249436 235249876 -15437978 + L1P LINE L1 3961 4418 -1728 180 0 0 0 chr2 235250175 235250195 -15437659 + (TTG)n Simple_repeat Simple_repeat 3 22 0 707 182 125 6 chr2 235250905 235251081 -15436773 + L1MB8 LINE L1 5006 5202 -944 688 191 0 96 chr2 235251082 235251239 -15436615 + FLAM_C SINE Alu 2 143 0 4057 193 37 23 chr2 235251243 235252215 -15435639 + L1MB8 LINE L1 5193 6174 -4 387 0 0 0 chr2 235252345 235252388 -15435466 + (TG)n Simple_repeat Simple_repeat 2 44 0 2917 211 23 27 chr2 235252986 235253453 -15434401 - L1ME1 LINE L1 -100 6066 5601 2249 109 0 6 chr2 235253453 235253765 -15434089 - AluSg SINE Alu 0 310 1 2917 211 23 27 chr2 235253765 235253995 -15433859 - L1ME1 LINE L1 -565 5601 5372 204 191 48 79 chr2 235254373 235254436 -15433418 - MIR3 SINE MIR -7 201 141 185 250 0 19 chr2 235254787 235254839 -15433015 + MIR SINE MIR 24 74 -188 214 276 69 38 chr2 235255132 235255323 -15432531 - MIR SINE MIR -10 252 2 458 216 22 97 chr2 235255408 235255593 -15432261 - MIR SINE MIR -22 240 75 1061 174 9 58 chr2 235256577 235256801 -15431053 - MER20 DNA MER1_type 0 219 7 23 0 0 0 chr2 235257302 235257325 -15430529 + AT_rich Low_complexity Low_complexity 1 23 0 2078 83 18 11 chr2 235259027 235259303 -15428551 + AluY SINE Alu 1 278 -33 228 35 0 0 chr2 235259306 235259335 -15428519 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 3395 68 2 2 chr2 235261226 235261650 -15426204 + L1PA8 LINE L1 5749 6172 0 180 0 0 0 chr2 235264146 235264166 -15423688 + (A)n Simple_repeat Simple_repeat 1 20 0 1544 206 25 54 chr2 235264932 235265339 -15422515 + MLT2C1 LTR ERVL 1 395 -2 433 200 26 116 chr2 235265659 235265814 -15422040 - MER20B DNA MER1_type -614 169 29 1405 60 22 22 chr2 235265991 235266174 -15421680 + L1PA4 LINE L1 5970 6152 -3 658 205 33 0 chr2 235266443 235266561 -15421293 + MER5A DNA MER1_type 5 126 -63 516 238 0 0 chr2 235266561 235266662 -15421192 - MER5A DNA MER1_type 0 189 89 550 214 0 51 chr2 235266697 235266814 -15421040 + AluJo SINE Alu 109 219 -93 244 233 0 0 chr2 235266817 235266860 -15420994 - MER5A DNA MER1_type -107 82 40 258 196 78 0 chr2 235266869 235266881 -15420973 + MER3 DNA MER1_type 36 51 -158 344 161 65 0 chr2 235266881 235266943 -15420911 - MER3 DNA MER1_type 0 209 144 366 213 0 0 chr2 235266949 235267024 -15420830 - MER3 DNA MER1_type -26 183 109 408 277 40 0 chr2 235267072 235267173 -15420681 - MER3 DNA MER1_type -104 105 1 1113 190 81 0 chr2 235267430 235267651 -15420203 - L1P LINE L1 -2237 3909 3671 861 179 65 12 chr2 235267651 235267819 -15420035 + LTR32 LTR ERVL 288 464 -7 800 224 73 0 chr2 235267903 235268122 -15419732 + L2 LINE L2 2421 2655 -659 1457 197 131 33 chr2 235268127 235268548 -15419306 - MLT1C LTR MaLR 0 467 6 799 231 59 5 chr2 235268556 235268742 -15419112 + L2 LINE L2 2659 2854 -460 600 307 151 59 chr2 235268916 235269749 -15418105 - L2 LINE L2 -1006 2308 1399 20777 49 53 4 chr2 235270206 235272909 -15414945 + L1P LINE L1 526 3361 -2785 369 0 0 0 chr2 235274011 235274052 -15413802 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1674 136 4 19 chr2 235274053 235274317 -15413537 - AluJo SINE Alu -43 269 10 180 250 0 71 chr2 235274340 235274396 -15413458 + L2 LINE L2 3207 3258 -55 238 356 10 19 chr2 235274486 235274590 -15413264 + MIR SINE MIR 30 132 -76 283 306 14 0 chr2 235274793 235274865 -15412989 + MER91B DNA MER1_type 1 73 -117 22 35 0 0 chr2 235275133 235275162 -15412692 + AT_rich Low_complexity Low_complexity 1 29 0 1021 183 44 98 chr2 235275229 235275568 -15412286 + MER33 DNA MER1_type 1 314 -10 1094 112 0 6 chr2 235276282 235276461 -15411393 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 213 65 0 0 chr2 235279920 235279951 -15407903 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 3383 8 0 0 chr2 235279951 235280304 -15407550 - L1PA3 LINE L1 -17 6138 5786 184 156 0 0 chr2 235280542 235280574 -15407280 + L2 LINE L2 3241 3272 0 295 105 263 0 chr2 235281539 235281596 -15406258 + MADE1 DNA Mariner 9 80 0 283 243 14 0 chr2 235281649 235281723 -15406131 - MER116 DNA Mariner -5 75 1 188 178 0 22 chr2 235281729 235281774 -15406080 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 354 59 20 0 chr2 235281825 235281876 -15405978 + MADE1 DNA Mariner 27 78 -2 842 283 7 42 chr2 235282120 235282428 -15405426 + L1ME1 LINE L1 5865 6161 -5 2544 96 50 16 chr2 235282449 235282812 -15405042 + THE1C LTR MaLR 1 375 0 27 29 0 0 chr2 235283573 235283607 -15404247 + AT_rich Low_complexity Low_complexity 1 34 0 196 308 0 0 chr2 235283707 235283759 -15404095 - L2 LINE L2 -7 3306 3255 1271 188 102 52 chr2 235283945 235284270 -15403584 - MER2 DNA MER2_type 0 344 4 2092 136 7 7 chr2 235284680 235285021 -15402833 + AluSx SINE Alu 1 341 0 1168 251 90 45 chr2 235285081 235285612 -15402242 + HAL1 LINE L1 1375 1929 -578 24 0 0 0 chr2 235285775 235285799 -15402055 + AT_rich Low_complexity Low_complexity 1 24 0 1756 249 62 32 chr2 235286657 235287304 -15400550 + L2 LINE L2 2177 2842 -472 8371 113 4 2 chr2 235287540 235288758 -15399096 + L1P LINE L1 3899 5118 -1028 26 64 0 0 chr2 235289496 235289543 -15398311 + AT_rich Low_complexity Low_complexity 1 47 0 2357 82 0 0 chr2 235289730 235290022 -15397832 - AluSc SINE Alu -15 294 3 4784 172 13 7 chr2 235291092 235292346 -15395508 + L1PB3 LINE L1 4741 6004 -150 3124 98 27 47 chr2 235292347 235292858 -15394996 + L1P LINE L1 3423 3923 -2223 433 263 131 61 chr2 235293114 235293312 -15394542 - MIR SINE MIR -25 237 26 813 154 0 0 chr2 235293336 235293453 -15394401 - AluSx SINE Alu -6 306 190 1002 67 0 0 chr2 235293453 235293573 -15394281 - AluSx SINE Alu -193 120 1 925 264 84 25 chr2 235293730 235294052 -15393802 + MER58B DNA MER1_type 1 341 0 2064 148 0 0 chr2 235294118 235294416 -15393438 + AluSx SINE Alu 1 298 -14 3524 164 19 75 chr2 235294965 235295693 -15392161 + LTR8 LTR ERV1 2 688 -3 378 61 0 0 chr2 235295697 235295746 -15392108 + (CA)n Simple_repeat Simple_repeat 2 50 0 235 269 74 43 chr2 235296237 235296425 -15391429 + L2 LINE L2 2855 3047 -266 2185 108 3 7 chr2 235296488 235296797 -15391057 + AluSq SINE Alu 1 308 0 431 276 45 0 chr2 235296910 235297044 -15390810 + MIR SINE MIR 119 258 -4 1862 126 22 0 chr2 235297238 235297516 -15390338 + AluSx SINE Alu 1 284 -28 279 152 65 0 chr2 235297833 235297879 -15389975 - MER112 DNA MER1_type -211 49 1 265 276 62 48 chr2 235298689 235298834 -15389020 - MER5A DNA MER1_type 0 189 43 532 273 28 17 chr2 235298849 235299025 -15388829 - MER5B DNA MER1_type 0 178 1 2155 117 20 0 chr2 235299462 235299760 -15388094 - AluSx SINE Alu -8 304 1 617 177 89 89 chr2 235300563 235300697 -15387157 - MER5B DNA MER1_type 0 178 42 2065 117 7 0 chr2 235300697 235300988 -15386866 - AluSx SINE Alu -19 293 1 617 177 89 89 chr2 235300988 235301011 -15386843 - MER5B DNA MER1_type -135 43 21 508 232 181 7 chr2 235301214 235301352 -15386502 + MER5A DNA MER1_type 22 183 -6 396 225 181 20 chr2 235301415 235301566 -15386288 - MIR SINE MIR -56 206 34 2979 154 56 13 chr2 235302030 235302562 -15385292 - LTR36 LTR ERV1 -1 610 56 594 293 70 70 chr2 235302795 235303164 -15384690 + MLT1I LTR MaLR 11 379 -30 253 200 0 71 chr2 235303710 235303780 -15384074 - L2 LINE L2 -69 3244 3180 456 192 200 16 chr2 235304166 235304291 -15383563 - MER5A DNA MER1_type -21 168 21 442 270 161 14 chr2 235304453 235304664 -15383190 - MIR SINE MIR 0 262 21 2152 121 0 3 chr2 235305411 235305708 -15382146 + AluSx SINE Alu 1 296 -16 3812 78 23 23 chr2 235306104 235306298 -15381556 + L1PB1 LINE L1 5634 5827 -324 2283 97 10 0 chr2 235306298 235306598 -15381256 + AluSq SINE Alu 1 303 -10 3812 78 23 23 chr2 235306598 235306917 -15380937 + L1PB1 LINE L1 5826 6147 -4 226 277 72 0 chr2 235307358 235307441 -15380413 + L1MC4 LINE L1 6615 6703 -1339 315 315 0 0 chr2 235307459 235307548 -15380306 + L1MC4 LINE L1 6615 6703 -1339 315 315 0 0 chr2 235307549 235307638 -15380216 + L1MC4 LINE L1 6615 6703 -1339 301 326 0 0 chr2 235307568 235307657 -15380197 - L1MC4 LINE L1 -1339 6703 6615 * 340 290 131 0 chr2 235307765 235307872 -15379982 + L2 LINE L2 3187 3307 -6 626 228 185 42 chr2 235307992 235308181 -15379673 + MIR SINE MIR 34 249 -13 257 235 12 25 chr2 235308215 235308296 -15379558 + CT-rich Low_complexity Low_complexity 2 81 0 416 223 0 54 chr2 235309081 235309211 -15378643 + L1MA8 LINE L1 6150 6272 -19 2339 69 7 13 chr2 235310316 235310619 -15377235 - AluY SINE Alu -10 301 1 208 239 172 37 chr2 235310619 235310753 -15377101 + MIR SINE MIR 94 245 -17 404 262 103 0 chr2 235311273 235311399 -15376455 + MIR SINE MIR 7 145 -117 180 0 0 0 chr2 235311826 235311846 -15376008 + (CAGCC)n Simple_repeat Simple_repeat 1 20 0 2193 123 3 0 chr2 235312668 235312978 -15374876 - AluY SINE Alu 0 311 1 421 255 66 71 chr2 235313052 235313264 -15374590 + MER58C DNA MER1_type 4 214 -1 251 303 214 0 chr2 235313270 235313359 -15374495 + MIR3 SINE MIR 15 122 -86 1278 287 106 14 chr2 235313917 235314603 -15373251 + L1ME LINE L1 4729 5479 -683 1681 129 17 31 chr2 235314633 235314920 -15372934 + AluSx SINE Alu 1 283 -29 863 127 0 70 chr2 235315244 235315402 -15372452 - AluJb SINE Alu -165 147 1 5609 79 16 74 chr2 235315409 235315820 -15372034 - L1MA1 LINE L1 -164 6138 5755 384 61 0 0 chr2 235315820 235315869 -15371985 + U5 snRNA snRNA 1 49 -67 5609 79 16 74 chr2 235315869 235316300 -15371554 - L1MA1 LINE L1 -547 5755 5300 25 0 0 0 chr2 235316349 235316374 -15371480 + AT_rich Low_complexity Low_complexity 1 25 0 2066 135 3 0 chr2 235316580 235316883 -15370971 - AluSx SINE Alu -8 304 1 304 293 67 110 chr2 235317601 235317901 -15369953 + L1MC4 LINE L1 7753 8039 -3 298 156 109 16 chr2 235318747 235318811 -15369043 - MER5A DNA MER1_type -111 78 9 19082 43 6 9 chr2 235318994 235321483 -15366371 + L1P1 LINE L1 2979 5456 -699 23 0 0 0 chr2 235321677 235321700 -15366154 + AT_rich Low_complexity Low_complexity 1 23 0 493 226 213 12 chr2 235322234 235322398 -15365456 + MIR SINE MIR 66 262 0 338 252 36 36 chr2 235322568 235322679 -15365175 - MLT1G LTR MaLR -1 554 444 420 288 99 1 chr2 235322735 235322978 -15364876 - MLT1G LTR MaLR -300 290 1 2267 103 0 26 chr2 235323054 235323364 -15364490 - AluSq SINE Alu -11 302 1 336 289 10 10 chr2 235323475 235323572 -15364282 - MIR SINE MIR -10 252 156 1808 221 18 13 chr2 235324114 235324561 -15363293 - L1MA9 LINE L1 -7 6305 5857 857 181 0 0 chr2 235324858 235325007 -15362847 - MLT2B3 LTR ERVL -405 149 1 239 313 102 42 chr2 235326322 235326488 -15361366 - MIR SINE MIR -79 183 8 1929 104 22 0 chr2 235327573 235327841 -15360013 + AluSg SINE Alu 1 274 -36 29 60 0 0 chr2 235327848 235327898 -15359956 + AT_rich Low_complexity Low_complexity 1 50 0 783 161 12 24 chr2 235328230 235328398 -15359456 - L1PB3 LINE L1 0 6154 5989 2606 83 3 16 chr2 235328432 235328805 -15359049 - L1PA8 LINE L1 0 6172 5805 12093 210 40 12 chr2 235328909 235332002 -15355852 - L1PBa LINE L1 -1059 5803 2633 243 0 0 0 chr2 235332002 235332029 -15355825 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 3065 19 0 14 chr2 235332029 235332391 -15355463 - L1PA3 LINE L1 -13 6142 5786 187 156 0 0 chr2 235332629 235332661 -15355193 + L2 LINE L2 3241 3272 0 608 171 0 26 chr2 235333834 235333951 -15353903 - MER81 DNA DNA 0 114 1 6877 51 30 6 chr2 235334559 235336081 -15351773 - L1PA7 LINE L1 -18 6136 4598 1917 123 3 14 chr2 235336619 235336928 -15350926 - AluSx SINE Alu 0 306 1 2128 125 7 0 chr2 235338021 235338318 -15349536 - AluSx SINE Alu -8 304 6 276 77 0 0 chr2 235338411 235338450 -15349404 + (TTATA)n Simple_repeat Simple_repeat 1 39 0 463 295 18 0 chr2 235338632 235338744 -15349110 + L2 LINE L2 3134 3247 -25 2006 108 54 3 chr2 235338832 235339127 -15348727 + AluSx SINE Alu 3 312 0 328 167 13 13 chr2 235339127 235339205 -15348649 + GA-rich Low_complexity Low_complexity 4 81 0 1243 67 11 6 chr2 235339205 235339384 -15348470 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 207 0 0 0 chr2 235340019 235340042 -15347812 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 687 236 24 18 chr2 235340098 235340263 -15347591 + FRAM SINE Alu 1 166 0 298 296 55 21 chr2 235340349 235340489 -15347365 - MIR SINE MIR -46 162 10 348 294 61 38 chr2 235340867 235341160 -15346694 - L1ME4a LINE L1 -220 5901 5602 284 340 78 29 chr2 235341185 235341529 -15346325 - L1MC4 LINE L1 -149 7893 7533 205 263 121 30 chr2 235341994 235342093 -15345761 - MIR SINE MIR -61 201 94 189 107 0 0 chr2 235342607 235342635 -15345219 + (ATG)n Simple_repeat Simple_repeat 2 29 0 249 271 81 20 chr2 235342679 235342811 -15345043 - MIR SINE MIR -65 143 52 1785 161 7 0 chr2 235342945 235343225 -15344629 + AluSx SINE Alu 1 282 -30 1073 137 0 9 chr2 235343240 235343475 -15344379 + (TA)n Simple_repeat Simple_repeat 1 232 0 322 232 0 53 chr2 235343475 235343570 -15344284 - L1MC4 LINE L1 -1339 6703 6614 344 278 187 0 chr2 235343893 235344091 -15343763 - L1ME LINE L1 -342 5779 5545 279 0 0 0 chr2 235345187 235345218 -15342636 + (CA)n Simple_repeat Simple_repeat 1 31 0 23 78 0 0 chr2 235346459 235346510 -15341344 + AT_rich Low_complexity Low_complexity 1 51 0 990 224 10 0 chr2 235346778 235346979 -15340875 + MER58A DNA MER1_type 9 211 -13 27 0 0 0 chr2 235346991 235347018 -15340836 + AT_rich Low_complexity Low_complexity 1 27 0 250 276 75 68 chr2 235348807 235348969 -15338885 - MIR3 SINE MIR -16 192 31 450 223 223 7 chr2 235349013 235349152 -15338702 + MER5A DNA MER1_type 21 189 0 2373 66 3 3 chr2 235349368 235349656 -15338198 + AluSq SINE Alu 8 295 -18 446 261 89 59 chr2 235350379 235350582 -15337272 - MER63A DNA MER1_type -1 209 1 22 0 0 0 chr2 235350834 235350856 -15336998 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 235350961 235350985 -15336869 + AT_rich Low_complexity Low_complexity 1 24 0 437 279 16 55 chr2 235351427 235351610 -15336244 - MER20B DNA MER1_type -607 176 1 204 283 0 0 chr2 235351610 235351656 -15336198 + L2 LINE L2 3225 3270 -2 460 262 24 24 chr2 235352303 235352429 -15335425 - MER5B DNA MER1_type -3 175 50 193 188 104 0 chr2 235352458 235352506 -15335348 + MER5B DNA MER1_type 126 178 0 316 339 8 8 chr2 235353450 235353571 -15334283 + LTR67 LTR ERVL 427 547 -10 340 207 103 11 chr2 235353622 235353709 -15334145 + MLT1K LTR MaLR 294 388 -200 2056 228 107 15 chr2 235353711 235354251 -15333603 + MLT1E LTR MaLR 4 593 0 247 285 104 62 chr2 235354291 235354435 -15333419 + MLT1K LTR MaLR 405 554 -34 730 136 8 0 chr2 235354455 235354580 -15333274 - L1MA3 LINE L1 0 6305 6180 292 83 0 0 chr2 235354581 235354629 -15333225 + L1MA3 LINE L1 6130 6177 -128 603 195 17 4 chr2 235354858 235354992 -15332862 - LTR40a LTR ERVL 0 519 346 10865 187 25 10 chr2 235355212 235356732 -15331122 - L1PB3 LINE L1 -193 5961 4466 236 0 88 0 chr2 235356732 235356766 -15331088 + T-rich Low_complexity Low_complexity 3 39 0 10865 187 25 10 chr2 235356766 235358402 -15329452 - L1PB3 LINE L1 -1688 4466 2755 2901 240 41 29 chr2 235358403 235359703 -15328151 + L1ME1 LINE L1 4823 6140 -26 549 332 52 0 chr2 235359869 235360101 -15327753 + L1MC4a LINE L1 7172 7415 -393 1034 67 0 15 chr2 235360439 235360573 -15327281 - AluYb8 SINE Alu -186 132 1 308 238 38 12 chr2 235360577 235360657 -15327197 + L1MC4 LINE L1 7812 7893 -149 204 298 0 0 chr2 235360673 235360720 -15327134 + polypyrimidine Low_complexity Low_complexity 2 48 0 456 224 112 21 chr2 235360755 235360898 -15326956 - MER103 DNA DNA -10 156 1 28 29 0 0 chr2 235361009 235361044 -15326810 + AT_rich Low_complexity Low_complexity 1 35 0 785 283 86 24 chr2 235361151 235361568 -15326286 - L1ME4a LINE L1 -187 5934 5492 7114 170 13 51 chr2 235361572 235362862 -15324992 + L1MA3 LINE L1 3 1243 -6322 * 13737 146 41 36 chr2 235362853 235363850 -15324004 + L1MA3 LINE L1 2247 3237 -4487 192 77 0 0 chr2 235363850 235363876 -15323978 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 13737 146 41 36 chr2 235363876 235364235 -15323619 + L1MA3 LINE L1 3237 3593 -4131 2530 67 0 3 chr2 235364235 235364547 -15323307 + AluY SINE Alu 1 311 0 13737 146 41 36 chr2 235364547 235366618 -15321236 + L1MA3 LINE L1 3593 5651 -2073 216 0 0 0 chr2 235366618 235366642 -15321212 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 13737 146 41 36 chr2 235366642 235368677 -15319177 + L1MA3 LINE L1 5651 7724 0 27 0 0 0 chr2 235368977 235369004 -15318850 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr2 235369491 235369516 -15318338 + AT_rich Low_complexity Low_complexity 1 25 0 25 65 0 0 chr2 235369725 235369771 -15318083 + AT_rich Low_complexity Low_complexity 1 46 0 282 324 39 10 chr2 235370411 235370513 -15317341 - MER5A DNA MER1_type 0 189 85 1315 242 148 38 chr2 235370556 235371051 -15316803 + MLT1H LTR MaLR 1 549 0 245 347 71 20 chr2 235371210 235371308 -15316546 + L2 LINE L2 3147 3249 -23 192 295 88 134 chr2 235371544 235371886 -15315968 + L2 LINE L2 2942 3267 -5 375 319 92 14 chr2 235371975 235372116 -15315738 - MER5A DNA MER1_type 0 189 38 4449 178 27 8 chr2 235373972 235374813 -15313041 - L1MB8 LINE L1 -1 6177 5321 204 40 0 0 chr2 235375298 235375323 -15312531 + (A)n Simple_repeat Simple_repeat 1 25 0 660 214 31 57 chr2 235376796 235376955 -15310899 + MER58B DNA MER1_type 175 329 -12 1487 211 64 14 chr2 235377009 235377355 -15310499 - MLT1A1 LTR MaLR -2 363 1 27 29 0 0 chr2 235377932 235377966 -15309888 + AT_rich Low_complexity Low_complexity 1 34 0 351 0 0 0 chr2 235378239 235378278 -15309576 + (TG)n Simple_repeat Simple_repeat 2 40 0 194 266 81 32 chr2 235381185 235381309 -15306545 + L2 LINE L2 2628 2757 -557 308 296 65 0 chr2 235381785 235381893 -15305961 + L2 LINE L2 3196 3310 -3 547 105 42 0 chr2 235382307 235382402 -15305452 - LTR1B LTR ERV1 -727 99 1 432 113 0 16 chr2 235382527 235382589 -15305265 - Tigger7 DNA MER2_type -36 2455 2395 1348 205 43 4 chr2 235382592 235382846 -15305008 - Tigger7 DNA MER2_type -2223 264 1 814 212 69 0 chr2 235384186 235384375 -15303479 - L1MA9 LINE L1 -776 5370 5169 * 5572 133 24 31 chr2 235384370 235385323 -15302531 + L1MA9 LINE L1 5362 6307 -5 2492 81 3 0 chr2 235386719 235387027 -15300827 - AluY SINE Alu -2 309 1 1539 248 12 9 chr2 235387103 235387442 -15300412 + MER58B DNA MER1_type 2 341 0 2180 96 4 4 chr2 235387991 235388271 -15299583 - AluSx SINE Alu -32 280 1 1559 155 69 7 chr2 235388418 235388708 -15299146 + AluJo SINE Alu 5 312 0 1688 171 137 0 chr2 235389837 235390158 -15297696 + MLT1A1 LTR MaLR 1 365 0 1522 222 95 7 chr2 235390174 235390597 -15297257 + LTR40c LTR ERVL 1 460 -5 216 67 0 0 chr2 235391442 235391472 -15296382 + (TG)n Simple_repeat Simple_repeat 2 31 0 341 281 6 90 chr2 235391844 235392011 -15295843 + MER5A DNA MER1_type 37 189 0 42 20 0 0 chr2 235392649 235392698 -15295156 + GC_rich Low_complexity Low_complexity 1 49 0 341 281 6 90 chr2 235393031 235393198 -15294656 + MER5A DNA MER1_type 37 189 0 216 0 0 0 chr2 235394466 235394490 -15293364 + (A)n Simple_repeat Simple_repeat 1 24 0 2457 77 3 0 chr2 235395089 235395389 -15292465 - AluY SINE Alu -10 301 1 261 227 0 15 chr2 235395664 235395730 -15292124 + MLT1H LTR MaLR 95 159 -390 231 271 59 51 chr2 235395863 235395981 -15291873 + MLT1H LTR MaLR 404 522 -27 2220 115 3 0 chr2 235396321 235396616 -15291238 + AluSg SINE Alu 1 296 -14 249 247 0 13 chr2 235397562 235397639 -15290215 + L1PBa LINE L1 1847 1922 -4941 22 0 0 0 chr2 235398118 235398140 -15289714 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr2 235398188 235398224 -15289630 + AT_rich Low_complexity Low_complexity 1 36 0 3610 163 83 1 chr2 235398504 235399248 -15288606 + L1PBa LINE L1 1837 2641 -4222 7925 59 128 6 chr2 235399249 235400357 -15287497 + L1P LINE L1 13 1255 -4891 2520 47 7 3 chr2 235400469 235400770 -15287084 - AluSp SINE Alu -11 302 1 224 238 0 0 chr2 235400798 235400840 -15287014 + (TATATG)n Simple_repeat Simple_repeat 2 43 0 44 70 0 0 chr2 235400889 235400975 -15286879 + AT_rich Low_complexity Low_complexity 1 86 0 1535 153 4 4 chr2 235401026 235401261 -15286593 - AluSx SINE Alu -17 295 61 370 232 66 128 chr2 235401564 235401775 -15286079 + MIR SINE MIR 15 212 -50 225 293 38 66 chr2 235401931 235402037 -15285817 + L2 LINE L2 3210 3312 -1 2286 115 0 0 chr2 235402383 235402695 -15285159 - AluSx SINE Alu 0 312 1 921 167 92 6 chr2 235403039 235403213 -15284641 + MER20 DNA MER1_type 29 217 -2 302 292 132 0 chr2 235403257 235403401 -15284453 - L1ME4a LINE L1 -195 5926 5764 304 239 98 54 chr2 235403403 235403495 -15284359 + L2 LINE L2 3155 3250 -22 2442 95 0 0 chr2 235403581 235403885 -15283969 - AluSc SINE Alu -5 304 1 739 156 0 57 chr2 235404172 235404326 -15283528 - FLAM_A SINE Alu 0 147 1 601 263 155 40 chr2 235404499 235404796 -15283058 - L2 LINE L2 0 3313 2983 549 289 136 45 chr2 235404809 235405162 -15282692 - L2 LINE L2 -2178 1136 752 1633 161 29 21 chr2 235405563 235405843 -15282011 + AluJo SINE Alu 1 282 -30 2237 106 7 0 chr2 235405844 235406146 -15281708 + AluSx SINE Alu 1 304 -8 261 0 0 0 chr2 235406161 235406190 -15281664 + (CA)n Simple_repeat Simple_repeat 2 30 0 182 329 49 86 chr2 235406885 235407128 -15280726 - L2 LINE L2 -122 3150 2917 270 273 134 64 chr2 235407461 235407633 -15280221 + MER5A DNA MER1_type 6 189 0 1807 128 35 35 chr2 235407790 235408104 -15279750 + AluSx SINE Alu 1 314 0 2315 93 0 13 chr2 235408808 235409110 -15278744 + AluSq SINE Alu 2 299 -14 572 239 50 28 chr2 235409323 235409503 -15278351 + L2 LINE L2 3129 3312 -1 2368 128 41 22 chr2 235409633 235410000 -15277854 + THE1C LTR MaLR 1 374 -1 312 70 0 0 chr2 235410980 235411023 -15276831 + (TA)n Simple_repeat Simple_repeat 1 43 0 387 268 140 59 chr2 235411768 235411858 -15275996 + HAL1 LINE L1 7 88 -2419 1993 122 7 18 chr2 235411858 235412188 -15275666 + AluSx SINE Alu 1 327 0 387 268 140 59 chr2 235412188 235412417 -15275437 + HAL1 LINE L1 88 353 -2154 241 171 13 53 chr2 235412550 235412626 -15275228 + HAL1 LINE L1 981 1053 -1454 27 0 0 0 chr2 235413792 235413819 -15274035 + AT_rich Low_complexity Low_complexity 1 27 0 1229 175 10 0 chr2 235413841 235414047 -15273807 - MER2 DNA MER2_type -135 210 3 2325 121 13 61 chr2 235414047 235414174 -15273680 + THE1B LTR MaLR 1 132 -232 2480 66 0 13 chr2 235414174 235414476 -15273378 - AluY SINE Alu -13 298 1 2325 121 13 61 chr2 235414476 235414727 -15273127 + THE1B LTR MaLR 132 361 -3 242 324 56 21 chr2 235417109 235417251 -15270603 + MIR SINE MIR 61 207 -55 21 36 0 0 chr2 235417566 235417594 -15270260 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 235417605 235417626 -15270228 + AT_rich Low_complexity Low_complexity 1 21 0 1126 38 8 0 chr2 235417654 235417785 -15270069 + AluY SINE Alu 1 132 -179 225 301 99 24 chr2 235418282 235418495 -15269359 - L1M4 LINE L1 -1030 5116 4888 7945 29 4 4 chr2 235418516 235420070 -15267784 - L1PA3 LINE L1 -3 6152 4598 1925 123 3 14 chr2 235420608 235420917 -15266937 - AluSx SINE Alu 0 306 1 2296 98 3 0 chr2 235422759 235423056 -15264798 - AluSx SINE Alu -14 298 1 192 245 38 19 chr2 235424024 235424077 -15263777 + L2 LINE L2 2245 2298 -1016 458 329 119 24 chr2 235424228 235424491 -15263363 + L2 LINE L2 2511 2830 -484 2206 116 3 6 chr2 235424491 235424802 -15263052 - AluSg SINE Alu 0 310 1 458 329 119 24 chr2 235424802 235424957 -15262897 + L2 LINE L2 2830 2969 -345 870 221 171 61 chr2 235424969 235425409 -15262445 + MLT1D LTR MaLR 16 503 -2 229 299 0 15 chr2 235425553 235425620 -15262234 + L2 LINE L2 3209 3274 -39 337 281 78 16 chr2 235425659 235425787 -15262067 + L2 LINE L2 3136 3271 -1 2232 121 3 0 chr2 235425839 235426145 -15261709 + AluSx SINE Alu 1 307 -5 2133 115 20 0 chr2 235426954 235427258 -15260596 + AluSq SINE Alu 1 310 -3 245 308 162 8 chr2 235429791 235429908 -15257946 + MIR3 SINE MIR 65 199 -9 226 282 71 0 chr2 235430208 235430293 -15257561 - MER5A DNA MER1_type -97 92 2 232 306 67 22 chr2 235430717 235430851 -15257003 - L3b LINE CR1 -154 1429 1290 379 250 64 36 chr2 235431959 235432099 -15255755 + MIR SINE MIR 32 175 -87 246 276 138 0 chr2 235432220 235432372 -15255482 - L1M4 LINE L1 -2199 3947 3775 773 148 17 0 chr2 235432381 235432495 -15255359 - Tigger3b DNA MER2_type 0 1241 1126 301 100 0 0 chr2 235432495 235432535 -15255319 - THE1B LTR MaLR 0 355 316 951 149 0 7 chr2 235432535 235432708 -15255146 + AluSg/x SINE Alu 146 317 0 1907 123 33 45 chr2 235432712 235433045 -15254809 - THE1B LTR MaLR -33 331 3 5581 142 66 21 chr2 235433185 235433290 -15254564 - Tigger3b DNA MER2_type -1946 1082 983 2419 76 3 0 chr2 235433290 235433591 -15254263 + AluY SINE Alu 1 302 -9 5581 142 66 21 chr2 235433591 235434194 -15253660 - Tigger3b DNA MER2_type -2045 983 311 354 45 0 0 chr2 235434194 235434238 -15253616 + (CA)n Simple_repeat Simple_repeat 1 44 0 5581 142 66 21 chr2 235434238 235434563 -15253291 - Tigger3b DNA MER2_type -2717 311 2 716 176 155 27 chr2 235435210 235435358 -15252496 + MER45A DNA AcHobo 12 178 0 3814 152 36 49 chr2 235435976 235436025 -15251829 - L1MB3 LINE L1 0 6183 6135 2223 91 7 10 chr2 235436025 235436321 -15251533 - AluSx SINE Alu -17 295 1 3814 152 36 49 chr2 235436321 235437020 -15250834 - L1MB3 LINE L1 -48 6135 5445 297 311 20 27 chr2 235437271 235437419 -15250435 - MIR SINE MIR -99 163 17 900 167 86 48 chr2 235437924 235438134 -15249720 + MER20 DNA MER1_type 1 218 -1 2450 69 0 7 chr2 235439023 235439328 -15248526 - AluY SINE Alu -8 303 1 1160 191 33 0 chr2 235439536 235439746 -15248108 + Tigger6a DNA MER2_type 4 220 -863 2012 178 83 0 chr2 235439762 235440149 -15247705 - LOR1b LTR ERV1 -42 419 1 3698 187 112 11 chr2 235440149 235440935 -15246919 + Tigger6a DNA MER2_type 219 1083 0 283 218 103 39 chr2 235441672 235441750 -15246104 + MLT1J LTR MaLR 98 180 -331 261 225 42 14 chr2 235441970 235442041 -15245813 + LTR33A LTR ERVL 449 521 -2 860 290 41 13 chr2 235442057 235442374 -15245480 + L2 LINE L2 2628 2953 -361 303 144 64 46 chr2 235443163 235443336 -15244518 + (TA)n Simple_repeat Simple_repeat 1 176 0 497 71 71 0 chr2 235443342 235443412 -15244442 - MADE1 DNA Mariner -5 75 1 217 51 51 0 chr2 235443428 235443467 -15244387 + (TA)n Simple_repeat Simple_repeat 2 42 0 212 165 38 38 chr2 235443504 235443583 -15244271 + (TA)n Simple_repeat Simple_repeat 2 80 0 401 309 71 14 chr2 235444026 235444236 -15243618 + L1MC4a LINE L1 5687 5908 -1900 2100 133 7 3 chr2 235444436 235444737 -15243117 + AluSx SINE Alu 1 302 -10 1992 138 10 10 chr2 235445059 235445370 -15242484 + AluJb SINE Alu 1 311 -1 203 164 36 0 chr2 235445373 235445428 -15242426 + A-rich Low_complexity Low_complexity 4 60 0 242 116 23 0 chr2 235445510 235445553 -15242301 + (TATG)n Simple_repeat Simple_repeat 4 47 0 655 88 0 0 chr2 235446008 235446088 -15241766 + AluS SINE Alu 3 82 -230 2177 129 0 3 chr2 235446636 235446945 -15240909 - AluSx SINE Alu -2 310 3 421 250 138 18 chr2 235447172 235447396 -15240458 - LTR16C LTR ERVL -17 474 224 553 214 209 15 chr2 235447639 235447840 -15240014 + MIR SINE MIR 22 261 -1 581 78 0 13 chr2 235448040 235448117 -15239737 - MADE1 DNA Mariner -2 78 3 2240 107 0 3 chr2 235448981 235449290 -15238564 - AluSx SINE Alu -4 308 1 1200 192 110 28 chr2 235449785 235450103 -15237751 - MER2 DNA MER2_type 0 344 1 2233 117 0 3 chr2 235452074 235452374 -15235480 - AluSq SINE Alu -14 299 1 282 302 137 7 chr2 235453827 235453966 -15233888 + MIR SINE MIR 32 188 -74 754 177 15 0 chr2 235453967 235454097 -15233757 - MER20 DNA MER1_type 0 219 88 1622 187 45 0 chr2 235454452 235454565 -15233289 + AluJo SINE Alu 8 114 -198 225 83 0 0 chr2 235454565 235454601 -15233253 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1622 187 45 0 chr2 235454601 235454776 -15233078 + AluJo SINE Alu 114 309 -3 2454 69 3 0 chr2 235454783 235455088 -15232766 + AluY SINE Alu 1 306 -5 1837 202 43 6 chr2 235455379 235455731 -15232123 + MLT1A1 LTR MaLR 1 365 0 431 289 102 6 chr2 235455987 235456153 -15231701 + MIR SINE MIR 81 262 0 241 204 136 68 chr2 235456201 235456289 -15231565 + MER103 DNA DNA 1 94 -72 423 0 0 0 chr2 235457306 235457353 -15230501 + (CA)n Simple_repeat Simple_repeat 1 47 0 260 242 11 0 chr2 235457824 235457919 -15229935 + (TATATG)n Simple_repeat Simple_repeat 1 96 0 189 0 0 0 chr2 235458528 235458549 -15229305 + (A)n Simple_repeat Simple_repeat 1 21 0 2078 126 3 10 chr2 235458902 235459204 -15228650 + AluSx SINE Alu 1 300 -12 231 36 0 0 chr2 235459431 235459459 -15228395 + (CA)n Simple_repeat Simple_repeat 1 28 0 302 340 43 25 chr2 235459636 235459871 -15227983 - L1MC/D LINE L1 -2027 5781 5543 354 296 178 7 chr2 235460549 235460701 -15227153 - MER5B DNA MER1_type 0 178 1 1480 251 77 21 chr2 235460941 235461419 -15226435 + Charlie4a DNA MER1_type 1 505 -3 303 266 126 105 chr2 235462712 235463140 -15224714 - L1M2 LINE L1 -5622 1227 791 206 208 144 40 chr2 235463298 235463423 -15224431 + MIR3 SINE MIR 4 141 -67 353 266 57 16 chr2 235464154 235464278 -15223576 - L1MC4a LINE L1 -1947 5861 5733 325 161 0 0 chr2 235464959 235465015 -15222839 + MIR SINE MIR 92 147 -61 499 275 38 25 chr2 235465076 235465236 -15222618 - Charlie8 DNA MER1_type -2203 214 53 354 233 27 0 chr2 235466909 235466982 -15220872 - MIR3 SINE MIR -28 180 106 2122 134 3 0 chr2 235467713 235468011 -15219843 + AluSx SINE Alu 1 299 -13 2120 167 13 105 chr2 235469073 235469599 -15218255 - MLT1D LTR MaLR -8 497 20 61 15 0 0 chr2 235470358 235470426 -15217428 + AT_rich Low_complexity Low_complexity 1 68 0 2930 156 92 28 chr2 235470603 235471181 -15216673 + L1MB7 LINE L1 5547 6161 -23 32 43 0 0 chr2 235471189 235471235 -15216619 + AT_rich Low_complexity Low_complexity 1 46 0 1957 109 64 0 chr2 235471387 235471547 -15216307 - AluSq SINE Alu -12 301 153 194 0 39 0 chr2 235471547 235471573 -15216281 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1957 109 64 0 chr2 235471573 235471695 -15216159 - AluSq SINE Alu -160 153 1 1704 66 0 0 chr2 235471897 235472094 -15215760 + MER107 DNA MER1_type 1 197 0 255 170 0 0 chr2 235472394 235472441 -15215413 + (TGGA)n Simple_repeat Simple_repeat 1 47 0 457 287 8 8 chr2 235472526 235472655 -15215199 + L2 LINE L2 3184 3312 -1 318 293 154 0 chr2 235472824 235472993 -15214861 - MIR SINE MIR -64 198 1 23 54 0 0 chr2 235473037 235473074 -15214780 + AT_rich Low_complexity Low_complexity 1 37 0 2263 120 64 19 chr2 235473085 235473444 -15214410 - THE1C LTR MaLR 0 375 1 1445 220 66 23 chr2 235473457 235474158 -15213696 - Charlie2 DNA MER1_type -72 2790 2013 2065 180 8 25 chr2 235474158 235474525 -15213329 + MLT1A1 LTR MaLR 1 361 -4 1445 220 66 23 chr2 235474525 235474640 -15213214 - Charlie2 DNA MER1_type -849 2013 1904 822 272 64 54 chr2 235474694 235474992 -15212862 - Charlie2 DNA MER1_type -2561 301 1 2461 124 11 32 chr2 235475445 235475817 -15212037 - THE1B LTR MaLR 0 364 1 259 220 0 0 chr2 235478633 235478683 -15209171 + L2 LINE L2 3211 3260 -12 1669 167 14 7 chr2 235478763 235479057 -15208797 + AluJb SINE Alu 1 296 -16 1260 257 75 5 chr2 235479293 235479717 -15208137 + L1M4 LINE L1 2270 2723 -3423 882 114 0 18 chr2 235479825 235479991 -15207863 - L1P LINE L1 -733 5422 5260 349 298 32 64 chr2 235480029 235480311 -15207543 - L1M4 LINE L1 -1301 4845 4573 745 264 91 37 chr2 235480348 235480537 -15207317 - L1M4 LINE L1 -1804 4342 4165 2171 121 78 29 chr2 235480537 235480884 -15206970 - THE1B LTR MaLR 0 364 1 745 264 91 37 chr2 235480884 235481210 -15206644 - L1M4 LINE L1 -1981 4165 3795 273 274 112 71 chr2 235481236 235481532 -15206322 - L1ME3A LINE L1 -11 6159 5852 791 121 65 0 chr2 235481755 235481879 -15205975 - MLT1A2 LTR MaLR 0 374 243 * 4466 135 16 4 chr2 235481869 235482572 -15205282 - MER50 LTR ERV1 -23 711 1 402 143 0 0 chr2 235482699 235482776 -15205078 + (TTC)n Simple_repeat Simple_repeat 2 78 0 2224 129 0 0 chr2 235482784 235483095 -15204759 - AluSx SINE Alu -1 311 1 765 198 19 6 chr2 235483096 235483258 -15204596 - MLT1A2 LTR MaLR -210 164 1 1382 148 52 77 chr2 235483812 235484136 -15203718 - MER33 DNA MER1_type -4 320 5 2163 109 0 0 chr2 235484707 235485015 -15202839 - AluSx SINE Alu 0 308 1 221 293 189 16 chr2 235485074 235485265 -15202589 - L2 LINE L2 -44 3269 3046 2090 139 3 0 chr2 235485398 235485699 -15202155 + AluSx SINE Alu 1 302 -10 24 0 0 0 chr2 235486587 235486611 -15201243 + AT_rich Low_complexity Low_complexity 1 24 0 464 210 35 42 chr2 235487146 235487289 -15200565 - L1ME4a LINE L1 -16 6105 5964 414 244 30 30 chr2 235487291 235487344 -15200510 - L1ME4a LINE L1 -230 5891 5839 2334 92 0 19 chr2 235487344 235487661 -15200193 - AluY SINE Alu 0 311 1 414 244 30 30 chr2 235487661 235487771 -15200083 - L1ME4a LINE L1 -281 5840 5728 3237 166 10 0 chr2 235487786 235488299 -15199555 + Tigger7 DNA MER2_type 1 518 -215 1602 189 6 28 chr2 235488299 235488617 -15199237 + AluJb SINE Alu 1 311 -1 1742 136 7 59 chr2 235488741 235489027 -15198827 - AluSx SINE Alu -12 300 30 1881 151 3 0 chr2 235489172 235489457 -15198397 - AluJb SINE Alu -26 286 1 331 345 12 67 chr2 235489861 235490026 -15197828 - L2 LINE L2 0 3272 3117 363 266 7 28 chr2 235491683 235491826 -15196028 - L1ME4a LINE L1 0 6121 5982 373 261 157 0 chr2 235491828 235491962 -15195892 - L1ME4a LINE L1 -195 5926 5772 207 0 0 0 chr2 235495098 235495121 -15192733 + (T)n Simple_repeat Simple_repeat 1 23 0 206 277 50 30 chr2 235495221 235495322 -15192532 + MER5A DNA MER1_type 65 167 -22 * 364 282 27 9 chr2 235495241 235495351 -15192503 - MER5A DNA MER1_type -72 117 6 1473 186 0 0 chr2 235496205 235496442 -15191412 - MLT1A1 LTR MaLR 0 365 129 21 0 0 0 chr2 235497530 235497551 -15190303 + AT_rich Low_complexity Low_complexity 1 21 0 555 329 105 35 chr2 235498206 235498941 -15188913 - L2 LINE L2 0 3272 2492 294 289 67 62 chr2 235499115 235499323 -15188531 - MLT1K LTR MaLR -24 591 356 1513 174 27 4 chr2 235500081 235500339 -15187515 + AluSx SINE Alu 3 266 -46 236 301 0 0 chr2 235500591 235500674 -15187180 - L1ME4a LINE L1 -344 5777 5695 21 0 0 0 chr2 235501755 235501776 -15186078 + AT_rich Low_complexity Low_complexity 1 21 0 768 183 154 4 chr2 235502255 235502495 -15185359 - MER5C DNA MER1_type 0 324 49 226 288 15 0 chr2 235502590 235502656 -15185198 + L1M4 LINE L1 2676 2742 -3404 2036 122 30 0 chr2 235502880 235503176 -15184678 + AluSg SINE Alu 1 305 -5 876 108 28 17 chr2 235503176 235503352 -15184502 + GA-rich Low_complexity Low_complexity 1 178 0 203 44 22 89 chr2 235503355 235503400 -15184454 + (GGAGAA)n Simple_repeat Simple_repeat 2 43 0 216 188 25 38 chr2 235503404 235503484 -15184370 + GA-rich Low_complexity Low_complexity 4 82 0 180 77 0 0 chr2 235503538 235503564 -15184290 + (GGAA)n Simple_repeat Simple_repeat 4 29 0 2157 109 3 0 chr2 235504106 235504391 -15183463 - AluSx SINE Alu -26 286 1 1858 178 9 6 chr2 235504550 235504882 -15182972 + L1MB2 LINE L1 5835 6167 -4 189 268 0 0 chr2 235505337 235505378 -15182476 - L2 LINE L2 -6 3307 3267 2436 117 39 28 chr2 235505619 235505979 -15181875 - THE1B LTR MaLR 0 364 1 212 186 17 0 chr2 235506574 235506633 -15181221 + (TA)n Simple_repeat Simple_repeat 1 60 0 2328 74 7 0 chr2 235506715 235507013 -15180841 + AluY SINE Alu 1 300 -11 2095 106 3 23 chr2 235507527 235507829 -15180025 - AluSx SINE Alu -16 296 1 22 35 0 0 chr2 235508289 235508318 -15179536 + AT_rich Low_complexity Low_complexity 1 29 0 2071 106 15 0 chr2 235508632 235508906 -15178948 - AluSg1 SINE Alu -31 278 1 2134 110 13 0 chr2 235508906 235509205 -15178649 - AluSq SINE Alu -10 303 1 2733 172 41 56 chr2 235609670 235609720 -15078134 + MER7C DNA MER2_type 1 50 -2978 3338 123 62 6 chr2 235609720 235610216 -15077638 - MER1A DNA MER1_type 0 527 4 2733 172 41 56 chr2 235610216 235610430 -15077424 + MER7C DNA MER2_type 50 266 -2762 1863 109 3 25 chr2 235610430 235610714 -15077140 + AluSx SINE Alu 1 278 -34 2733 172 41 56 chr2 235610714 235611059 -15076795 + MER7C DNA MER2_type 266 602 0 649 280 58 54 chr2 235611109 235611748 -15076106 + L1MEd LINE L1 993 1629 -861 806 213 6 12 chr2 235612008 235612168 -15075686 - MER97c DNA MER1_type? -911 179 21 580 136 0 0 chr2 235612169 235612250 -15075604 + FRAM SINE Alu 22 102 -74 420 138 0 0 chr2 235612250 235612308 -15075546 - Charlie3 DNA MER1_type -2458 252 195 276 83 0 0 chr2 235612307 235612343 -15075511 + FLAM_A SINE Alu 85 120 -13 * 3245 276 79 32 chr2 235612461 235613779 -15074075 + L2 LINE L2 1748 3121 -192 430 141 45 181 chr2 235613788 235613965 -15073889 + L1MC5 LINE L1 7702 7854 -107 762 271 29 71 chr2 235614171 235614521 -15073333 + MLT2C1 LTR ERVL 60 394 -3 5373 177 73 2 chr2 235614524 235615523 -15072331 - MER70A-int LTR ERVL -3953 1070 1 859 245 21 0 chr2 235615523 235615711 -15072143 - MER70A LTR ERVL 0 472 281 2076 109 0 26 chr2 235615954 235616257 -15071597 + AluSx SINE Alu 1 295 -17 3228 104 65 28 chr2 235616289 235616797 -15071057 - MER1A DNA MER1_type 0 527 1 1158 130 0 0 chr2 235617511 235617688 -15070166 + AluSg/x SINE Alu 127 303 -9 2067 120 0 0 chr2 235617953 235618245 -15069609 + AluSx SINE Alu 12 303 -9 1764 116 41 17 chr2 235618399 235618432 -15069422 - AluJb SINE Alu 0 312 281 324 0 0 0 chr2 235618432 235618468 -15069386 + (TG)n Simple_repeat Simple_repeat 2 37 0 1764 116 41 17 chr2 235618468 235618727 -15069127 - AluJb SINE Alu -31 281 13 186 150 0 0 chr2 235619387 235619427 -15068427 + (CAG)n Simple_repeat Simple_repeat 1 40 0 297 236 0 0 chr2 235619465 235619571 -15068283 + (CCA)n Simple_repeat Simple_repeat 3 108 0 333 307 55 73 chr2 235620192 235620645 -15067209 + L2 LINE L2 2149 2593 -721 1674 113 0 0 chr2 235621242 235621473 -15066381 + AluSx SINE Alu 1 231 -81 303 211 0 0 chr2 235622248 235622338 -15065516 + (TGG)n Simple_repeat Simple_repeat 3 92 0 186 150 0 0 chr2 235622377 235622417 -15065437 + (CTG)n Simple_repeat Simple_repeat 1 40 0 1233 147 5 0 chr2 235624045 235624236 -15063618 - AluSg SINE Alu -118 192 1 1978 115 26 0 chr2 235624258 235624563 -15063291 - AluSp SINE Alu 0 313 1 2095 121 40 32 chr2 235624719 235625091 -15062763 - THE1C LTR MaLR 0 375 1 23 0 0 0 chr2 235625096 235625119 -15062735 + AT_rich Low_complexity Low_complexity 1 23 0 1230 172 0 18 chr2 235625552 235625773 -15062081 - AluJo SINE Alu -95 217 1 3306 133 17 32 chr2 235625968 235626092 -15061762 - MER1A DNA MER1_type -2173 527 403 2114 123 0 0 chr2 235626092 235626401 -15061453 - AluSx SINE Alu -3 309 1 3306 133 17 32 chr2 235626401 235626809 -15061045 - MER1A DNA MER1_type -2297 403 3 249 299 76 51 chr2 235626864 235627021 -15060833 + MIR SINE MIR 2 164 -44 26 0 0 0 chr2 235627096 235627122 -15060732 + AT_rich Low_complexity Low_complexity 1 26 0 778 163 0 0 chr2 235627150 235627273 -15060581 - FLAM_C SINE Alu -10 123 1 367 306 91 60 chr2 235627517 235627572 -15060282 - L1MC4a LINE L1 -1755 6053 6001 225 108 0 0 chr2 235627572 235627609 -15060245 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 1772 160 0 0 chr2 235627611 235627892 -15059962 - AluJb SINE Alu -31 281 1 367 306 91 60 chr2 235627892 235628065 -15059789 - L1MC4a LINE L1 -1807 6001 5815 1723 152 15 0 chr2 235628130 235628400 -15059454 - AluSx SINE Alu -38 274 1 2348 87 7 0 chr2 235628504 235628802 -15059052 + AluSx SINE Alu 11 310 -2 2515 142 65 2 chr2 235628957 235629358 -15058496 - MSTA LTR MaLR -2 426 1 742 218 0 0 chr2 235629373 235629506 -15058348 - FLAM_C SINE Alu 0 133 1 2156 126 7 0 chr2 235629708 235630009 -15057845 + AluSx SINE Alu 1 303 -9 1597 177 4 4 chr2 235630135 235630412 -15057442 - AluJo SINE Alu -35 277 1 24 32 0 0 chr2 235630570 235630601 -15057253 + AT_rich Low_complexity Low_complexity 1 31 0 181 339 17 17 chr2 235631561 235631620 -15056234 + MIR SINE MIR 14 72 -190 15329 147 45 13 chr2 235632173 235634219 -15053635 + L1M1 LINE L1 1703 3682 -3990 2646 62 0 0 chr2 235634219 235634527 -15053327 + AluY SINE Alu 1 308 -3 15329 147 45 13 chr2 235634527 235635118 -15052736 + L1M1 LINE L1 3682 4253 -3419 1696 184 0 23 chr2 235635118 235635428 -15052426 + AluJb SINE Alu 1 303 -9 15329 147 45 13 chr2 235635428 235637063 -15050791 + L1M1 LINE L1 4253 6166 -1506 207 0 0 0 chr2 235637063 235637086 -15050768 + (CAA)n Simple_repeat Simple_repeat 2 24 0 15329 147 45 13 chr2 235637086 235637876 -15049978 + L1M1 LINE L1 6166 6929 -743 1729 103 0 0 chr2 235637876 235638100 -15049754 - AluSq SINE Alu -89 224 1 1777 161 27 17 chr2 235638571 235638869 -15048985 + AluJo SINE Alu 6 306 -6 1791 167 6 22 chr2 235639115 235639426 -15048428 + AluJb SINE Alu 2 307 -5 268 186 0 51 chr2 235640084 235640143 -15047711 - MLT2B2 LTR ERVL -2 513 458 21 57 0 0 chr2 235640146 235640181 -15047673 + AT_rich Low_complexity Low_complexity 1 35 0 1311 184 6 94 chr2 235640297 235640628 -15047226 + AluSq SINE Alu 1 302 -11 276 136 0 0 chr2 235640677 235640721 -15047133 + U5 snRNA snRNA 1 44 -72 2249 88 7 0 chr2 235640731 235641061 -15046793 - AluSp SINE Alu 0 332 1 260 237 39 25 chr2 235641249 235641342 -15046512 - MLT2F LTR ERVL -502 126 32 1785 144 0 38 chr2 235642667 235642958 -15044896 - AluJb SINE Alu -32 280 1 993 309 156 42 chr2 235643036 235643747 -15044107 + L2 LINE L2 462 1090 -2224 2159 112 0 0 chr2 235643747 235644032 -15043822 - AluY SINE Alu -26 285 1 993 309 156 42 chr2 235644032 235644835 -15043019 + L2 LINE L2 1090 2149 -1165 2077 105 0 74 chr2 235644836 235645159 -15042695 + AluSx SINE Alu 14 312 0 1742 207 44 36 chr2 235645413 235645800 -15042054 - MLT1B LTR MaLR 0 390 1 193 267 33 17 chr2 235646995 235647055 -15040799 + MIR SINE MIR 70 130 -78 238 211 0 0 chr2 235647109 235647161 -15040693 + (TGG)n Simple_repeat Simple_repeat 3 54 0 186 150 0 0 chr2 235647193 235647233 -15040621 + (CTG)n Simple_repeat Simple_repeat 1 40 0 2238 106 0 0 chr2 235647868 235648161 -15039693 + AluSq SINE Alu 10 302 -11 1751 183 0 6 chr2 235648748 235649060 -15038794 - AluJo SINE Alu -1 311 2 2057 124 3 0 chr2 235649577 235649923 -15037931 + AluSx SINE Alu 1 347 0 1289 254 58 15 chr2 235649927 235650325 -15037529 + MER20B DNA MER1_type 4 418 -365 548 230 34 0 chr2 235650328 235650535 -15037319 - LTR37A LTR ERV1 -234 192 18 364 258 98 70 chr2 235650548 235650792 -15037062 - L1M4 LINE L1 -1252 4894 4644 228 219 0 0 chr2 235650800 235650841 -15037013 + tRNA-Val-GTG tRNA tRNA 1 41 -35 329 327 68 25 chr2 235651047 235651209 -15036645 - MIR SINE MIR -73 189 21 245 98 24 0 chr2 235652761 235652802 -15035052 + (GAAAA)n Simple_repeat Simple_repeat 5 46 0 1254 258 39 14 chr2 235652869 235653226 -15034628 + MLT2F LTR ERVL 222 587 -76 646 228 24 0 chr2 235653446 235653569 -15034285 + AluJo/FLAM SINE Alu 3 128 -174 2039 135 0 0 chr2 235653572 235653896 -15033958 + AluSx SINE Alu 1 324 0 2330 126 153 5 chr2 235653915 235654288 -15033566 + MSTA LTR MaLR 1 428 0 874 172 28 0 chr2 235654290 235654487 -15033367 + AluJb SINE Alu 140 330 -219 895 147 0 22 chr2 235654487 235654623 -15033231 + FLAM_C SINE Alu 1 133 0 874 172 28 0 chr2 235654623 235654696 -15033158 + AluJb SINE Alu 330 549 0 2166 114 0 0 chr2 235655137 235655443 -15032411 - AluSx SINE Alu -6 306 1 1542 185 30 7 chr2 235655610 235655728 -15032126 + AluJb SINE Alu 1 115 -197 207 0 0 0 chr2 235655728 235655751 -15032103 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 1542 185 30 7 chr2 235655751 235655929 -15031925 + AluJb SINE Alu 115 304 -8 2294 103 3 0 chr2 235656159 235656451 -15031403 + AluSx SINE Alu 1 293 -19 856 126 0 8 chr2 235656967 235657086 -15030768 + FLAM_C SINE Alu 1 118 -15 25 0 0 0 chr2 235657086 235657111 -15030743 + AT_rich Low_complexity Low_complexity 1 25 0 234 0 0 0 chr2 235657175 235657201 -15030653 + (TG)n Simple_repeat Simple_repeat 2 27 0 744 180 33 20 chr2 235657201 235657351 -15030503 - L1PB4 LINE L1 -15 6141 5990 1043 145 18 0 chr2 235657351 235657517 -15030337 + L1PB4 LINE L1 5794 5962 -194 8092 33 0 0 chr2 235658634 235659668 -15028186 + L1PA3 LINE L1 5121 6154 -1 25 31 0 0 chr2 235659670 235659702 -15028152 + AT_rich Low_complexity Low_complexity 1 32 0 7739 175 24 18 chr2 235660107 235660924 -15026930 + MSTA-int LTR MaLR 240 1071 -580 2408 159 65 7 chr2 235660924 235661327 -15026527 - MSTA LTR MaLR -2 426 1 7739 175 24 18 chr2 235661327 235661912 -15025942 + MSTA-int LTR MaLR 1071 1651 0 1043 125 119 0 chr2 235661912 235662080 -15025774 + MSTA LTR MaLR 1 188 -238 290 390 88 4 chr2 235662093 235662342 -15025512 + L3b LINE CR1 1253 1522 -61 1988 151 3 0 chr2 235662481 235662779 -15025075 - AluSx SINE Alu -13 299 1 1972 137 45 0 chr2 235663330 235663622 -15024232 - AluSx SINE Alu -7 305 1 186 150 0 0 chr2 235664696 235664736 -15023118 + (CAG)n Simple_repeat Simple_repeat 1 40 0 276 260 0 0 chr2 235664768 235664841 -15023013 + (CCA)n Simple_repeat Simple_repeat 3 75 0 278 296 102 0 chr2 235665374 235665472 -15022382 - MER103 DNA DNA 0 166 59 625 309 64 47 chr2 235665583 235666237 -15021617 + L1ME4a LINE L1 4381 5045 -1101 10263 155 3 9 chr2 235666255 235668256 -15019598 - L1PA14 LINE L1 -1 6160 4172 2057 114 4 0 chr2 235668256 235668537 -15019317 - AluSp SINE Alu -2 311 30 10263 155 3 9 chr2 235668537 235669001 -15018853 - L1PA14 LINE L1 -1989 4172 3707 2143 102 0 72 chr2 235669114 235669447 -15018407 + AluSq SINE Alu 1 309 -4 791 257 85 19 chr2 235669489 235669808 -15018046 + L1ME4a LINE L1 5271 5610 -552 1449 213 31 6 chr2 235669815 235670139 -15017715 - L1MC4 LINE L1 -960 7082 6751 180 111 0 0 chr2 235670350 235670377 -15017477 + (TG)n Simple_repeat Simple_repeat 2 28 0 983 184 25 10 chr2 235671074 235671275 -15016579 - MER3 DNA MER1_type -5 204 1 255 319 80 33 chr2 235671584 235671797 -15016057 - L2 LINE L2 -1228 2086 1864 446 221 178 24 chr2 235671858 235672071 -15015783 + L1ME4a LINE L1 5873 6118 -3 704 221 0 22 chr2 235672181 235672317 -15015537 - FLAM_A SINE Alu 0 133 1 2097 123 3 0 chr2 235672332 235672616 -15015238 - AluSx SINE Alu -27 285 1 243 292 25 43 chr2 235672761 235672922 -15014932 - L2 LINE L2 -1519 1795 1638 202 342 38 0 chr2 235672923 235673002 -15014852 + L2 LINE L2 3232 3313 0 2128 117 0 0 chr2 235673970 235674276 -15013578 - AluSx SINE Alu 0 306 1 236 233 23 0 chr2 235674549 235674592 -15013262 + Charlie1 DNA MER1_type 3 46 -2715 * 1968 186 38 5 chr2 235674590 235675010 -15012844 + Charlie1 DNA MER1_type 2328 2761 0 363 239 103 56 chr2 235676268 235676481 -15011373 - L1M2 LINE L1 -5968 881 659 1580 190 3 7 chr2 235677331 235677621 -15010233 + AluJo SINE Alu 1 289 -23 1897 151 21 0 chr2 235677862 235678146 -15009708 + AluJb SINE Alu 1 290 -22 750 244 68 5 chr2 235678376 235678581 -15009273 - MER58A DNA MER1_type -6 218 1 325 322 15 4 chr2 235678610 235678781 -15009073 + MIR SINE MIR 2 247 -15 2575 48 0 6 chr2 235679062 235679373 -15008481 + AluY SINE Alu 2 310 -1 510 150 0 0 chr2 235679502 235679582 -15008272 + AluSg/x SINE Alu 212 291 -18 1028 113 0 0 chr2 235680867 235681000 -15006854 + AluY SINE Alu 1 133 -178 1532 93 9 5 chr2 235681010 235681224 -15006630 + AluY SINE Alu 6 220 -91 2080 133 3 0 chr2 235681606 235681907 -15005947 + AluSx SINE Alu 1 302 -10 1501 268 70 42 chr2 235682575 235682764 -15005090 + L1M4 LINE L1 2266 2448 -3698 2477 84 7 3 chr2 235682764 235683073 -15004781 - AluSx SINE Alu -2 310 1 1501 268 70 42 chr2 235683073 235683904 -15003950 + L1M4 LINE L1 2448 3315 -2831 1556 166 0 0 chr2 235683910 235684145 -15003709 - AluSx SINE Alu -77 235 1 1230 165 0 0 chr2 235684145 235684369 -15003485 - L1P LINE L1 -813 5333 5110 2048 117 3 3 chr2 235684369 235684691 -15003163 - AluSg SINE Alu 0 322 1 1988 124 0 33 chr2 235684693 235685000 -15002854 - AluSx SINE Alu -15 297 1 2007 114 19 44 chr2 235686142 235686458 -15001396 - AluSx SINE Alu -4 308 1 2561 66 0 0 chr2 235686744 235687048 -15000806 - AluSc SINE Alu -5 304 1 2258 119 0 3 chr2 235688253 235688555 -14999299 - AluSx SINE Alu -11 301 1 1102 237 59 3 chr2 235689149 235689436 -14998418 - L1ME1 LINE L1 -6 6160 5858 407 178 112 95 chr2 235690149 235690318 -14997536 - L1MC5 LINE L1 -36 7925 7754 193 312 52 0 chr2 235690327 235690404 -14997450 + MIR SINE MIR 110 190 -72 270 342 38 32 chr2 235691538 235691696 -14996158 + L3b LINE CR1 1109 1267 -316 1467 116 169 8 chr2 235692813 235693083 -14994771 - AluSg1 SINE Alu 0 309 1 1262 199 149 39 chr2 235693276 235693658 -14994196 + MSTB2 LTR MaLR 32 455 -2 424 274 108 33 chr2 235693784 235694025 -14993829 + L1MEd LINE L1 4 262 -5857 590 302 85 43 chr2 235694032 235694492 -14993362 + L1MEd LINE L1 347 825 -5294 1668 117 0 4 chr2 235694595 235694835 -14993019 + AluSg SINE Alu 62 300 -10 2167 125 3 6 chr2 235695617 235695930 -14991924 + AluSx SINE Alu 1 312 0 1751 106 8 0 chr2 235696672 235696909 -14990945 - AluSq SINE Alu -14 299 61 336 277 84 8 chr2 235698281 235698400 -14989454 + L2 LINE L2 3145 3272 0 771 181 15 0 chr2 235698945 235699078 -14988776 + AluJb SINE Alu 165 299 -13 233 249 63 95 chr2 235699130 235699171 -14988683 - MER112 DNA MER1_type -55 205 164 1891 100 16 0 chr2 235699171 235699422 -14988432 - AluSx SINE Alu -27 285 31 233 249 63 95 chr2 235699422 235699569 -14988285 - MER112 DNA MER1_type -96 164 23 805 182 0 0 chr2 235699593 235699725 -14988129 + AluJo SINE Alu 1 132 -170 1361 111 0 5 chr2 235699728 235699927 -14987927 - L1P4 LINE L1 -472 5696 5499 1440 110 59 4 chr2 235699927 235700161 -14987693 + L1PA11 LINE L1 5926 6174 0 1050 165 0 22 chr2 235700165 235700347 -14987507 + AluJo SINE Alu 127 304 -8 1962 132 0 4 chr2 235700763 235701036 -14986818 + AluSq SINE Alu 1 272 -41 1696 164 11 3 chr2 235701577 235701899 -14985955 + AluJb SINE Alu 1 324 0 2176 124 0 3 chr2 235702012 235702303 -14985551 - AluSx SINE Alu -22 290 1 505 91 0 0 chr2 235702726 235702792 -14985062 + AluJ/FLAM SINE Alu 1 66 -246 1823 136 46 21 chr2 235703435 235703736 -14984118 + AluSx SINE Alu 1 308 0 975 232 80 11 chr2 235703779 235704055 -14983799 + MER88 LTR ERVL 113 407 -57 2300 121 0 0 chr2 235704772 235705079 -14982775 - AluSx SINE Alu -5 307 1 2441 84 10 7 chr2 235705931 235706239 -14981615 - AluSx SINE Alu -3 309 1 27 0 0 0 chr2 235706483 235706510 -14981344 + AT_rich Low_complexity Low_complexity 1 27 0 186 150 0 0 chr2 235707027 235707067 -14980787 + (CAG)n Simple_repeat Simple_repeat 1 40 0 330 226 0 0 chr2 235707105 235707211 -14980643 + (CCA)n Simple_repeat Simple_repeat 3 108 0 216 0 0 0 chr2 235707531 235707555 -14980299 + (T)n Simple_repeat Simple_repeat 1 24 0 2821 147 58 18 chr2 235708301 235708456 -14979398 + MLT2B1 LTR ERVL 3 150 -370 578 227 183 95 chr2 235708456 235708608 -14979246 + MSTB LTR MaLR 1 138 -288 2061 108 38 3 chr2 235708608 235708895 -14978959 + AluSx SINE Alu 1 297 -15 578 227 183 95 chr2 235708895 235709130 -14978724 + MSTB LTR MaLR 138 422 -4 2821 147 58 18 chr2 235709130 235709470 -14978384 + MLT2B1 LTR ERVL 150 518 -2 1967 152 3 3 chr2 235709497 235709793 -14978061 - AluSx SINE Alu -16 296 1 2095 112 35 0 chr2 235710609 235710895 -14976959 + AluSq SINE Alu 1 296 -17 249 282 0 0 chr2 235711606 235711684 -14976170 - L1MC4 LINE L1 -1341 6701 6624 183 42 0 0 chr2 235711684 235711708 -14976146 + (TG)n Simple_repeat Simple_repeat 2 25 0 826 88 0 0 chr2 235711723 235711825 -14976029 - AluSp/q SINE Alu -32 281 180 329 105 0 18 chr2 235711835 235711892 -14975962 - L1PA16 LINE L1 -14 6152 6097 180 231 0 0 chr2 235712404 235712443 -14975411 - L2 LINE L2 -10 3262 3224 1764 136 74 0 chr2 235712504 235712762 -14975092 + AluSq SINE Alu 4 280 -33 363 119 0 0 chr2 235712762 235712821 -14975033 + AluSp/q SINE Alu 245 303 0 1937 137 3 10 chr2 235713558 235713864 -14973990 + AluSx SINE Alu 1 304 -8 2057 122 3 35 chr2 235714228 235714540 -14973314 - MER1B DNA MER1_type -1 338 37 1117 106 0 0 chr2 235714772 235714913 -14972941 + AluSq/x SINE Alu 1 141 -172 285 66 33 98 chr2 235714913 235714974 -14972880 + FLAM SINE Alu 78 133 0 2006 129 0 7 chr2 235715494 235715828 -14972026 + AluSx SINE Alu 1 332 0 320 254 172 14 chr2 235715908 235716117 -14971737 + L1ME2 LINE L1 4957 5198 -948 2422 107 0 0 chr2 235716126 235716436 -14971418 + AluSx SINE Alu 1 310 -2 690 134 0 0 chr2 235716482 235716579 -14971275 + AluJ/FLAM SINE Alu 3 99 -213 1366 221 172 30 chr2 235716634 235717427 -14970427 + L1ME2 LINE L1 5188 6149 -15 1999 144 98 23 chr2 235717427 235717481 -14970373 + MSTC LTR MaLR 1 49 -379 1643 169 23 13 chr2 235717481 235717782 -14970072 + AluJo SINE Alu 1 304 -8 1999 144 98 23 chr2 235717782 235718123 -14969731 + MSTC LTR MaLR 49 426 -2 278 209 62 124 chr2 235718123 235718161 -14969693 + L1MA10 LINE L1 6295 6334 0 1007 225 89 31 chr2 235718170 235718495 -14969359 + L1ME2 LINE L1 5821 6164 0 180 0 0 0 chr2 235719062 235719082 -14968772 + (A)n Simple_repeat Simple_repeat 1 20 0 2084 129 0 28 chr2 235719161 235719478 -14968376 - AluSx SINE Alu -4 308 1 936 134 0 0 chr2 235719757 235719884 -14967970 - AluSq/x SINE Alu -186 127 1 1345 167 0 9 chr2 235720106 235720334 -14967520 + AluJb SINE Alu 81 306 -6 870 208 44 32 chr2 235720480 235720728 -14967126 + LTR37A LTR ERV1 89 339 -87 887 139 321 5 chr2 235720728 235720937 -14966917 + LTR29 LTR ERV1 1 275 -347 339 146 92 108 chr2 235720999 235721129 -14966725 + LTR49 LTR ERV1 385 512 -83 2209 107 10 7 chr2 235721352 235721660 -14966194 - AluSx SINE Alu -3 309 1 285 292 140 29 chr2 235722647 235722818 -14965036 - MIR SINE MIR -64 198 9 2059 76 79 21 chr2 235722887 235723211 -14964643 - AluSg SINE Alu 0 341 1 2428 92 0 6 chr2 235723215 235723530 -14964324 - AluSq SINE Alu 0 313 1 1771 172 10 22 chr2 235723557 235723871 -14963983 - AluJb SINE Alu -2 310 1 1833 160 6 19 chr2 235724612 235724925 -14962929 + AluJo SINE Alu 1 309 -3 499 209 48 121 chr2 235724927 235725133 -14962721 - L2 LINE L2 0 3313 3123 2053 108 61 0 chr2 235725346 235725623 -14962231 + AluSx SINE Alu 1 294 -18 2133 105 7 11 chr2 235725901 235726214 -14961640 - AluSx SINE Alu 0 312 1 228 350 20 0 chr2 235726283 235726383 -14961471 - HAL1b LINE L1 -54 1294 1193 2214 123 3 3 chr2 235726446 235726755 -14961099 - AluSx SINE Alu -3 309 1 975 200 128 21 chr2 235726856 235727091 -14960763 + AluJo SINE Alu 50 309 -3 409 96 14 14 chr2 235727096 235727169 -14960685 + (GGAA)n Simple_repeat Simple_repeat 3 75 0 2108 139 7 7 chr2 235727200 235727509 -14960345 + AluSx SINE Alu 1 309 -3 2065 143 0 3 chr2 235727524 235727825 -14960029 + AluSx SINE Alu 1 300 -12 381 211 144 0 chr2 235728114 235728204 -14959650 + FLAM_C SINE Alu 1 103 -30 1365 158 66 4 chr2 235728305 235728490 -14959364 - AluJb SINE Alu -70 242 39 1878 127 4 4 chr2 235728490 235728765 -14959089 + AluSx SINE Alu 29 303 -9 1365 158 66 4 chr2 235728765 235728807 -14959047 - AluJb SINE Alu -273 39 1 1259 181 33 7 chr2 235729404 235729675 -14958179 + L1MA4 LINE L1 6012 6289 -11 1554 211 68 47 chr2 235730336 235730487 -14957367 + L1 LINE L1 2719 2865 -3281 1871 143 14 0 chr2 235730487 235730794 -14957060 + AluSx SINE Alu 1 311 0 1554 211 68 47 chr2 235730794 235731171 -14956683 + L1 LINE L1 2865 3259 -2887 216 0 0 0 chr2 235731178 235731202 -14956652 + (A)n Simple_repeat Simple_repeat 1 24 0 524 250 245 0 chr2 235731228 235731444 -14956410 + L1 LINE L1 3762 4030 -2116 1516 101 0 0 chr2 235731508 235731716 -14956138 + AluY SINE Alu 5 212 -99 2393 71 3 0 chr2 235731826 235732151 -14955703 - AluY SINE Alu 0 326 1 1380 194 29 18 chr2 235732172 235732317 -14955537 - AluJo SINE Alu -30 282 131 2143 127 0 0 chr2 235732317 235732624 -14955230 - AluSx SINE Alu -5 307 1 1380 194 29 18 chr2 235732624 235732757 -14955097 - AluJo SINE Alu -181 131 1 835 104 0 0 chr2 235733642 235733757 -14954097 - AluSq SINE Alu -83 230 116 973 126 7 20 chr2 235733777 235733928 -14953926 - AluSq/x SINE Alu -161 151 3 2224 103 0 0 chr2 235733932 235734233 -14953621 - AluSx SINE Alu -11 301 1 285 250 21 21 chr2 235734344 235734440 -14953414 + L2 LINE L2 2922 3017 -296 182 161 0 0 chr2 235734553 235734584 -14953270 + L2 LINE L2 3184 3214 -58 195 42 0 0 chr2 235735820 235735844 -14952010 + (TTTC)n Simple_repeat Simple_repeat 4 27 0 1935 100 3 31 chr2 235735845 235736318 -14951536 - AluSx SINE Alu 0 465 1 550 202 0 0 chr2 235736393 235736482 -14951372 - 5S rRNA rRNA -32 89 1 506 184 26 53 chr2 235736636 235736750 -14951104 - MER51A LTR ERV1 -297 337 227 593 101 0 0 chr2 235736796 235736875 -14950979 + AluSg/x SINE Alu 213 291 -18 1803 170 40 63 chr2 235736983 235737096 -14950758 - MLT1B LTR MaLR 0 390 276 3178 140 40 108 chr2 235737096 235737565 -14950289 + LTR8 LTR ERV1 1 404 -287 2009 110 4 0 chr2 235737565 235737872 -14949982 + AluSp SINE Alu 1 308 0 3178 140 40 108 chr2 235737872 235738142 -14949712 + LTR8 LTR ERV1 404 691 0 1803 170 40 63 chr2 235738142 235738248 -14949606 - MLT1B LTR MaLR -114 276 169 2152 95 0 0 chr2 235738248 235738711 -14949143 - AluSg SINE Alu 0 463 1 1803 170 40 63 chr2 235738711 235738888 -14948966 - MLT1B LTR MaLR -221 169 1 320 363 50 0 chr2 235739017 235739196 -14948658 + L1MC/D LINE L1 5654 5841 -1967 1921 123 0 27 chr2 235739415 235739716 -14948138 + AluSx SINE Alu 1 293 -19 29 0 0 0 chr2 235739716 235739745 -14948109 + AT_rich Low_complexity Low_complexity 1 29 0 204 67 0 0 chr2 235739862 235739892 -14947962 + (CA)n Simple_repeat Simple_repeat 2 31 0 195 314 39 20 chr2 235740695 235740797 -14947057 - MIR3 SINE MIR -32 176 73 3018 184 53 4 chr2 235740797 235741347 -14946507 + LTR22 LTR ERVK 1 577 -3 2394 60 0 3 chr2 235741807 235742109 -14945745 + AluY SINE Alu 1 301 -10 3551 137 6 15 chr2 235742509 235743041 -14944813 - MER1A DNA MER1_type 0 527 1 627 173 10 0 chr2 235743266 235743370 -14944484 + AluSg SINE Alu 2 106 -204 1922 62 0 0 chr2 235743470 235743711 -14944143 - AluY SINE Alu -70 241 1 461 249 54 60 chr2 235743782 235743967 -14943887 - HAL1 LINE L1 -312 2195 2012 2004 133 0 13 chr2 235744187 235744496 -14943358 - AluSx SINE Alu -7 305 1 216 241 0 0 chr2 235745117 235745196 -14942658 + (TGG)n Simple_repeat Simple_repeat 3 81 0 186 150 0 0 chr2 235745234 235745274 -14942580 + (CTG)n Simple_repeat Simple_repeat 1 40 0 2131 109 20 0 chr2 235745903 235746206 -14941648 + AluSg SINE Alu 1 309 -1 1859 153 10 7 chr2 235746223 235746530 -14941324 + AluSg SINE Alu 3 310 0 2135 115 3 0 chr2 235746964 235747259 -14940595 - AluSq SINE Alu -17 296 1 501 204 39 0 chr2 235747400 235747503 -14940351 + MER21B LTR ERV1 142 248 -615 1517 115 43 0 chr2 235747759 235747993 -14939861 - AluSx SINE Alu -24 288 45 991 142 0 0 chr2 235747993 235748141 -14939713 - AluSq/x SINE Alu -165 148 1 438 167 24 0 chr2 235748159 235748239 -14939615 - MER20 DNA MER1_type 0 219 138 1997 122 34 3 chr2 235748239 235748534 -14939320 - MER4C LTR ERV1 0 465 162 2020 115 21 0 chr2 235748534 235748822 -14939032 + AluSx SINE Alu 1 294 -18 370 231 66 0 chr2 235748822 235748913 -14938941 - MER21B LTR ERV1 -669 194 98 418 149 0 15 chr2 235748966 235749033 -14938821 - AluS SINE Alu -242 68 3 352 308 11 0 chr2 235749033 235749124 -14938730 - MER21B LTR ERV1 -761 102 11 184 237 158 13 chr2 235749144 235749220 -14938634 - L2 LINE L2 -377 2895 2809 325 288 56 25 chr2 235749500 235749660 -14938194 + MIR SINE MIR 66 230 -32 1975 62 99 0 chr2 235749730 235750002 -14937852 - AluY SINE Alu -7 304 6 2146 119 0 0 chr2 235750235 235750537 -14937317 - AluSq SINE Alu -11 302 1 23 0 0 0 chr2 235750785 235750808 -14937046 + AT_rich Low_complexity Low_complexity 1 23 0 2102 117 3 0 chr2 235750819 235751117 -14936737 - AluSx SINE Alu -13 299 1 639 211 8 16 chr2 235751125 235751248 -14936606 - FLAM_A SINE Alu -11 122 1 381 213 43 0 chr2 235751250 235751344 -14936510 - L1ME LINE L1 -340 5781 5684 777 276 59 17 chr2 235752016 235752255 -14935599 - MIR SINE MIR -1 261 13 241 283 74 126 chr2 235752512 235752649 -14935205 - L2 LINE L2 -448 2866 2723 1441 153 48 75 chr2 235752649 235752944 -14934910 + AluJo SINE Alu 1 287 -15 2235 82 0 0 chr2 235752954 235753235 -14934619 + AluSx SINE Alu 1 281 -31 494 82 12 0 chr2 235753236 235753321 -14934533 + (TA)n Simple_repeat Simple_repeat 2 87 0 241 283 74 126 chr2 235753321 235753591 -14934263 - L2 LINE L2 -599 2715 2468 334 232 152 7 chr2 235753657 235753795 -14934059 + MER20 DNA MER1_type 5 162 -57 482 114 0 0 chr2 235754266 235754336 -14933518 + Alu SINE Alu 224 293 -17 1457 131 36 14 chr2 235754403 235754678 -14933176 + L1MA8 LINE L1 6010 6290 -1 2034 137 0 0 chr2 235754771 235755071 -14932783 - AluSx SINE Alu -12 300 1 2190 109 0 0 chr2 235755306 235755609 -14932245 - AluSx SINE Alu -9 303 1 901 192 228 17 chr2 235755766 235756105 -14931749 + LTR29 LTR ERV1 1 267 -355 4493 158 21 48 chr2 235756105 235757086 -14930768 - LTR5 LTR ERVK -14 955 1 901 192 228 17 chr2 235757086 235757170 -14930684 + LTR29 LTR ERV1 267 545 -77 1392 141 4 21 chr2 235757194 235757428 -14930426 - AluSx SINE Alu -53 259 30 397 204 32 21 chr2 235757428 235757521 -14930333 + MER39B LTR ERV1 560 653 0 186 150 0 0 chr2 235758476 235758516 -14929338 + (CAG)n Simple_repeat Simple_repeat 1 40 0 234 237 0 0 chr2 235758554 235758630 -14929224 + (CCA)n Simple_repeat Simple_repeat 3 78 0 194 333 99 0 chr2 235759344 235759425 -14928429 + MIR SINE MIR 65 153 -109 1035 124 20 148 chr2 235759433 235759490 -14928364 - L1MC1 LINE L1 -1 6332 6269 2105 104 0 3 chr2 235759490 235759779 -14928075 + AluSx SINE Alu 1 288 -24 1035 124 20 148 chr2 235759779 235759971 -14927883 - L1MC1 LINE L1 -64 6269 6115 1557 141 108 0 chr2 235760020 235760289 -14927565 + AluSx SINE Alu 2 299 -13 1994 124 10 0 chr2 235760766 235761065 -14926789 - AluSx SINE Alu -10 302 1 1725 196 17 20 chr2 235761797 235762150 -14925704 + MER89 LTR ERV1 208 559 0 331 284 164 0 chr2 235762151 235762285 -14925569 + L1ME4a LINE L1 5620 5775 -387 1590 184 24 0 chr2 235762351 235762645 -14925209 - AluJo SINE Alu -11 301 1 13307 49 3 1 chr2 235762867 235765263 -14922591 + L1PA5 LINE L1 3748 6150 -4 794 304 86 33 chr2 235765264 235765957 -14921897 - L2 LINE L2 -135 3178 2403 837 166 7 7 chr2 235765972 235766123 -14921731 + AluJb SINE Alu 134 284 -28 712 186 105 105 chr2 235767305 235767600 -14920254 - L1MC5 LINE L1 -909 7052 6758 1690 183 7 7 chr2 235767600 235767906 -14919948 - AluSx SINE Alu -6 306 1 1923 142 3 19 chr2 235767926 235768243 -14919611 - AluSx SINE Alu 0 312 1 1976 92 5 173 chr2 235768476 235768887 -14918967 + LTR14B LTR ERVK 1 606 -2 409 274 44 0 chr2 235769090 235769203 -14918651 + L1MD2 LINE L1 6223 6340 -19 1679 160 0 20 chr2 235769237 235769537 -14918317 + AluJo SINE Alu 12 305 -7 275 245 39 45 chr2 235769666 235769821 -14918033 + L1ME4a LINE L1 5782 5935 -186 1265 172 165 4 chr2 235769832 235770093 -14917761 + AluJb SINE Alu 3 305 -7 1913 115 0 85 chr2 235770132 235770472 -14917382 + AluSq SINE Alu 3 313 0 988 265 151 35 chr2 235770472 235770982 -14916872 + L1MC4 LINE L1 7315 7883 -159 755 185 0 30 chr2 235771001 235771136 -14916718 + FLAM_C SINE Alu 2 132 -11 320 252 34 20 chr2 235771137 235771284 -14916570 + L1MC4 LINE L1 7894 8042 0 730 159 0 0 chr2 235771329 235771436 -14916418 + FLAM_C SINE Alu 12 118 -25 342 196 147 21 chr2 235771447 235771590 -14916264 + L1ME4a LINE L1 5961 6121 0 1844 147 0 11 chr2 235771928 235772239 -14915615 + AluSx SINE Alu 2 309 0 1926 148 0 0 chr2 235772622 235772913 -14914941 + AluSx SINE Alu 1 291 -21 828 208 6 6 chr2 235772967 235773145 -14914709 + FRAM SINE Alu 1 176 0 926 129 0 0 chr2 235774046 235774178 -14913676 - AluSg/x SINE Alu -15 295 164 2106 106 7 0 chr2 235774183 235774476 -14913378 - AluSp SINE Alu -18 295 1 264 281 0 16 chr2 235774658 235774722 -14913132 - L2 LINE L2 0 3313 3251 294 231 0 0 chr2 235775072 235775163 -14912691 + (TGG)n Simple_repeat Simple_repeat 3 93 0 285 226 32 0 chr2 235775201 235775294 -14912560 + (CTG)n Simple_repeat Simple_repeat 2 97 0 4508 131 7 21 chr2 235775395 235776105 -14911749 + MER50 LTR ERV1 12 711 -23 1954 135 3 6 chr2 235776890 235777201 -14910653 - AluSq SINE Alu -3 310 1 506 272 47 37 chr2 235777240 235777431 -14910423 + MIR SINE MIR 20 212 -50 1926 133 21 0 chr2 235778041 235778327 -14909527 - AluSx SINE Alu -20 292 1 2603 60 0 0 chr2 235779057 235779374 -14908480 + L1PA6 LINE L1 5714 6030 -124 216 0 0 0 chr2 235780085 235780109 -14907745 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 405 272 67 30 chr2 235780676 235780828 -14907026 + MIR SINE MIR 7 161 -63 262 320 62 39 chr2 235781156 235781284 -14906570 + MIR3 SINE MIR 15 145 -63 906 128 0 8 chr2 235781383 235781516 -14906338 - AluJo SINE Alu -178 134 3 198 357 82 10 chr2 235782270 235782368 -14905486 - L2 LINE L2 -181 3091 2987 225 0 0 0 chr2 235783254 235783279 -14904575 + (T)n Simple_repeat Simple_repeat 1 25 0 230 219 16 0 chr2 235783736 235783800 -14904054 + CT-rich Low_complexity Low_complexity 2 66 0 524 241 25 137 chr2 235783807 235784048 -14903806 + MIR SINE MIR 48 261 -1 326 330 87 6 chr2 235784200 235784373 -14903481 - MIR SINE MIR -41 221 35 234 91 0 0 chr2 235784717 235784750 -14903104 + (TTCTCC)n Simple_repeat Simple_repeat 3 35 0 2105 127 10 3 chr2 235784755 235785055 -14902799 - AluSx SINE Alu -10 302 1 524 60 0 0 chr2 235785517 235785584 -14902270 + Alu SINE Alu 236 302 -8 2726 99 31 0 chr2 235785997 235786350 -14901504 + THE1B LTR MaLR 1 364 0 254 218 149 34 chr2 235786519 235786865 -14900989 + LTR16A1 LTR ERVL 96 455 -2 1662 207 41 55 chr2 235787013 235787429 -14900425 - LTR2 LTR ERV1 0 449 40 1419 102 15 0 chr2 235787721 235787917 -14899937 - AluSp SINE Alu -2 311 113 2356 97 10 0 chr2 235788115 235788414 -14899440 + AluSx SINE Alu 1 302 -10 24 0 0 0 chr2 235788699 235788723 -14899131 + AT_rich Low_complexity Low_complexity 1 24 0 1570 185 33 4 chr2 235788723 235788999 -14898855 - AluJb SINE Alu -24 288 5 4635 184 21 27 chr2 235789311 235789660 -14898194 - L1MB8 LINE L1 0 6178 5829 2193 126 0 0 chr2 235789660 235789954 -14897900 - AluSx SINE Alu -14 298 5 4635 184 21 27 chr2 235789954 235791209 -14896645 - L1MB8 LINE L1 -349 5829 4581 1706 176 10 6 chr2 235791210 235791522 -14896332 + AluSq SINE Alu 1 313 0 1822 235 158 0 chr2 235791530 235792061 -14895793 - L1MB8 LINE L1 -2029 4117 3503 1848 162 0 13 chr2 235792177 235792480 -14895374 - AluJo SINE Alu -2 310 12 1158 115 0 36 chr2 235792499 235792664 -14895190 - AluSg/x SINE Alu -14 298 140 1642 140 46 35 chr2 235792676 235792961 -14894893 - AluSq SINE Alu -25 288 1 2095 119 0 3 chr2 235793760 235794045 -14893809 + AluSq SINE Alu 12 295 -18 1164 260 57 52 chr2 235794262 235794361 -14893493 + L1ME3A LINE L1 5496 5593 -577 1856 144 7 24 chr2 235794361 235794653 -14893201 - AluJo SINE Alu -25 287 1 1164 260 57 52 chr2 235794653 235795010 -14892844 + L1ME3A LINE L1 5593 5954 -216 2708 26 3 0 chr2 235795651 235795959 -14891895 + AluY SINE Alu 1 309 -2 3309 127 24 44 chr2 235797317 235797938 -14889916 + MER4B LTR ERV1 1 779 0 682 196 10 85 chr2 235798275 235798474 -14889380 - MER53 DNA DNA -3 186 3 540 153 41 0 chr2 235798576 235798674 -14889180 + MLT1D LTR MaLR 404 505 0 359 0 43 0 chr2 235798957 235799003 -14888851 + (TCCA)n Simple_repeat Simple_repeat 3 50 0 2185 104 0 3 chr2 235799178 235799488 -14888366 + AluSc SINE Alu 1 309 0 315 224 0 0 chr2 235800611 235800678 -14887176 - LTR28 LTR ERV1 -195 825 759 1569 219 188 60 chr2 235800687 235801234 -14886620 - LTR28 LTR ERV1 -400 620 4 303 309 103 61 chr2 235801382 235801547 -14886307 - MER5B DNA MER1_type 0 178 7 246 358 51 0 chr2 235801712 235801849 -14886005 - MIR SINE MIR -1 261 118 291 304 198 27 chr2 235802258 235802626 -14885228 + L3 LINE CR1 955 1385 -192 1884 162 3 0 chr2 235802945 235803242 -14884612 - AluJb SINE Alu -14 298 1 289 320 122 33 chr2 235804385 235804566 -14883288 - MIR SINE MIR -32 230 34 977 113 0 0 chr2 235804588 235804721 -14883133 - AluSq/x SINE Alu -179 133 1 1699 153 54 80 chr2 235805256 235805360 -14882494 - MER61A LTR ERV1 0 343 238 2197 112 13 7 chr2 235805360 235805663 -14882191 + AluSx SINE Alu 1 305 -7 1699 153 54 80 chr2 235805663 235805910 -14881944 - MER61A LTR ERV1 -105 238 1 1088 277 82 73 chr2 235805954 235806662 -14881192 - ERVL LTR ERVL -361 5403 4686 2034 131 3 3 chr2 235806662 235806959 -14880895 - AluSx SINE Alu -15 297 1 1088 277 82 73 chr2 235806959 235807007 -14880847 - ERVL LTR ERVL -1078 4686 4640 2380 86 0 0 chr2 235807150 235807442 -14880412 - AluY SINE Alu -19 292 1 413 266 52 32 chr2 235807627 235807781 -14880073 - ERVL LTR ERVL -1431 4223 4067 219 36 0 0 chr2 235807794 235807822 -14880032 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1735 145 42 0 chr2 235807839 235808101 -14879753 - AluSx SINE Alu -39 273 1 525 245 37 0 chr2 235809500 235809651 -14878203 + MIR SINE MIR 106 261 -1 195 42 0 0 chr2 235809694 235809718 -14878136 + (TC)n Simple_repeat Simple_repeat 1 24 0 2035 111 0 11 chr2 235809718 235809998 -14877856 - AluSx SINE Alu -35 277 1 336 127 0 0 chr2 235810084 235810139 -14877715 + (TTCC)n Simple_repeat Simple_repeat 3 57 0 31 44 0 0 chr2 235810156 235810201 -14877653 + AT_rich Low_complexity Low_complexity 1 45 0 1269 57 4 161 chr2 235810206 235810436 -14877418 - L1MA1 LINE L1 -4 6298 6105 411 259 148 35 chr2 235810697 235810881 -14876973 - MIR SINE MIR -51 211 10 234 0 0 0 chr2 235811377 235811403 -14876451 + (TA)n Simple_repeat Simple_repeat 2 27 0 348 288 171 18 chr2 235811531 235811701 -14876153 + MIR3 SINE MIR 12 207 -1 2200 176 90 156 chr2 235811764 235811942 -14875912 - LTR8 LTR ERV1 0 727 539 1928 156 0 3 chr2 235811942 235812244 -14875610 - AluJb SINE Alu -5 307 7 2200 176 90 156 chr2 235812244 235812843 -14875011 - LTR8 LTR ERV1 -188 539 1 2557 201 46 87 chr2 235812864 235813141 -14874713 + L1ME2 LINE L1 5423 5710 -454 6109 137 11 8 chr2 235813141 235814041 -14873813 + MER4D LTR ERV1 1 903 0 2557 201 46 87 chr2 235814041 235814278 -14873576 + L1ME2 LINE L1 5710 5899 -265 2922 152 7 5 chr2 235814278 235814705 -14873149 - MSTA LTR MaLR 0 428 1 2557 201 46 87 chr2 235814705 235814944 -14872910 + L1ME2 LINE L1 5899 6146 -18 21318 104 7 29 chr2 235815336 235819509 -14868345 + L1P3 LINE L1 1 4171 -2290 923 276 67 22 chr2 235819535 235819847 -14868007 + L1MC4a LINE L1 6542 6867 -941 225 132 0 0 chr2 235819872 235819910 -14867944 + (CCCTAA)n Simple_repeat Simple_repeat 5 42 0 385 136 0 0 chr2 235819910 235819969 -14867885 - L1P LINE L1 -1128 5018 4960 790 284 47 25 chr2 235820156 235820473 -14867381 + L1MC4 LINE L1 7098 7421 -621 247 269 146 0 chr2 235820520 235820650 -14867204 + L1MC5 LINE L1 7312 7460 -501 905 164 0 8 chr2 235820662 235820796 -14867058 - FLAM_C SINE Alu 0 133 1 1835 153 7 3 chr2 235820823 235821117 -14866737 + AluSx SINE Alu 1 295 -17 948 122 0 0 chr2 235821201 235821332 -14866522 + AluJo SINE Alu 6 136 -176 207 108 27 0 chr2 235821336 235821373 -14866481 + (TTAAA)n Simple_repeat Simple_repeat 3 40 0 275 283 88 47 chr2 235821414 235821753 -14866101 + L1MC4 LINE L1 7689 8041 -1 26 0 0 0 chr2 235821849 235821875 -14865979 + AT_rich Low_complexity Low_complexity 1 26 0 2379 89 0 10 chr2 235822132 235822436 -14865418 - AluSx SINE Alu -11 301 1 1719 188 0 16 chr2 235822667 235822833 -14865021 - AluJo SINE Alu -13 299 139 2163 130 0 7 chr2 235822833 235823134 -14864720 - AluJb SINE Alu -13 299 1 1719 188 0 16 chr2 235823134 235823271 -14864583 - AluJo SINE Alu -173 139 1 2263 104 0 3 chr2 235823521 235823818 -14864036 - AluSg SINE Alu -14 296 1 228 308 0 39 chr2 235823915 235824019 -14863835 + LTR33A LTR ERVL 416 515 -8 2042 130 3 0 chr2 235824069 235824384 -14863470 + AluSq SINE Alu 1 316 0 183 326 11 34 chr2 235824417 235824506 -14863348 + MER5A DNA MER1_type 19 105 -84 2083 125 13 0 chr2 235825075 235825380 -14862474 + AluSx SINE Alu 1 309 -3 477 50 0 0 chr2 235825380 235825440 -14862414 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 243 327 100 0 chr2 235826390 235826500 -14861354 - L2 LINE L2 -2 3311 3191 261 237 204 11 chr2 235826958 235827051 -14860803 + MER5A DNA MER1_type 36 146 -43 2213 102 0 0 chr2 235827404 235827734 -14860120 - AluSq SINE Alu 0 330 1 495 318 10 20 chr2 235827734 235827935 -14859919 - L1ME LINE L1 -414 5707 5509 215 140 20 0 chr2 235828738 235828788 -14859066 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 245 247 12 0 chr2 235828857 235828938 -14858916 + GA-rich Low_complexity Low_complexity 4 85 0 2170 111 3 3 chr2 235829705 235830003 -14857851 + AluSx SINE Alu 1 298 -14 2106 125 0 0 chr2 235830841 235831122 -14856732 + AluSx SINE Alu 1 301 0 181 0 0 0 chr2 235831122 235831142 -14856712 + (CAA)n Simple_repeat Simple_repeat 1 180 0 203 381 22 7 chr2 235831147 235831286 -14856568 - L2 LINE L2 -1107 2207 2067 266 196 20 0 chr2 235831293 235831345 -14856509 + AluJ/FRAM SINE Alu 232 324 0 361 0 0 0 chr2 235831345 235831385 -14856469 + (TAAA)n Simple_repeat Simple_repeat 1 180 0 372 306 80 40 chr2 235831531 235831730 -14856124 + L2 LINE L2 3107 3313 0 353 297 56 14 chr2 235832047 235832176 -14855678 + MIR SINE MIR 21 155 -74 399 316 74 48 chr2 235832439 235832708 -14855146 + L2 LINE L2 336 611 -2703 847 209 53 145 chr2 235832850 235833244 -14854610 + L1MC5 LINE L1 7372 7698 -263 435 38 0 0 chr2 235833244 235833297 -14854557 + (TA)n Simple_repeat Simple_repeat 2 54 0 847 209 53 145 chr2 235833297 235833482 -14854372 + L1MC5 LINE L1 7698 7898 -63 870 109 8 0 chr2 235833507 235833626 -14854228 + FLAM_C SINE Alu 1 120 -23 227 79 26 0 chr2 235834439 235834477 -14853377 + (TC)n Simple_repeat Simple_repeat 2 40 0 311 276 60 22 chr2 235834565 235834699 -14853155 + L2 LINE L2 1823 1961 -1353 715 295 28 26 chr2 235835065 235835382 -14852472 + L1ME3 LINE L1 5811 6130 -32 2007 121 0 17 chr2 235835383 235835673 -14852181 + AluSg SINE Alu 1 285 -25 260 300 120 0 chr2 235835969 235836069 -14851785 - MER103 DNA DNA -43 123 12 2289 107 3 0 chr2 235836245 235836553 -14851301 + AluSq SINE Alu 1 309 -4 515 186 62 87 chr2 235836811 235836972 -14850882 + MER5A DNA MER1_type 1 157 -32 2286 95 0 3 chr2 235837010 235837305 -14850549 - AluSg SINE Alu -16 294 1 2126 85 37 0 chr2 235838233 235838554 -14849300 + AluSg SINE Alu 1 331 0 2127 201 23 36 chr2 235838832 235839305 -14848549 - MLT1C LTR MaLR 0 467 1 5875 168 37 111 chr2 235839311 235839833 -14848021 - MLT1C-int LTR MaLR -5 1366 807 1672 114 0 0 chr2 235839833 235840060 -14847794 - AluSq SINE Alu -11 302 76 5875 168 37 111 chr2 235840060 235840838 -14847016 - MLT1C-int LTR MaLR -564 807 186 2213 104 0 0 chr2 235840838 235841117 -14846737 - AluSg SINE Alu -31 279 1 5875 168 37 111 chr2 235841117 235841290 -14846564 - MLT1C-int LTR MaLR -1185 186 2 810 214 0 0 chr2 235843351 235843505 -14844349 - FRAM SINE Alu -22 154 1 246 365 64 13 chr2 235843958 235844114 -14843740 - MIR SINE MIR -79 183 20 2110 141 0 0 chr2 235844326 235844630 -14843224 - AluSx SINE Alu -8 304 1 271 227 187 0 chr2 235844641 235844716 -14843138 - L2 LINE L2 -37 3235 3147 776 223 147 0 chr2 235844788 235844985 -14842869 - MIR SINE MIR -19 243 18 1653 128 48 24 chr2 235844992 235845243 -14842611 - AluJo SINE Alu -51 261 5 2407 135 11 27 chr2 235847323 235847693 -14840161 - THE1B LTR MaLR 0 364 1 23 0 0 0 chr2 235847973 235847996 -14839858 + AT_rich Low_complexity Low_complexity 1 23 0 2289 92 0 3 chr2 235848008 235848303 -14839551 - AluSg SINE Alu -16 294 1 1042 86 0 0 chr2 235848433 235848572 -14839282 - AluSc SINE Alu -6 303 165 1637 153 35 31 chr2 235848952 235849240 -14838614 + AluJo SINE Alu 4 292 -20 2061 126 34 0 chr2 235849242 235849535 -14838319 + AluSg SINE Alu 1 303 -7 1587 153 94 7 chr2 235849591 235849866 -14837988 + AluJb SINE Alu 1 299 -13 315 234 117 9 chr2 235849967 235850078 -14837776 + MER58C DNA MER1_type 74 196 -19 539 260 103 25 chr2 235850080 235850284 -14837570 - MER112 DNA MER1_type -40 220 1 814 231 49 10 chr2 235850943 235851146 -14836708 - MER20 DNA MER1_type -7 212 2 792 75 0 0 chr2 235851200 235851294 -14836560 - AluSx SINE Alu -36 276 183 836 86 0 0 chr2 235851294 235851399 -14836455 - AluSx SINE Alu -169 143 39 206 54 0 54 chr2 235851429 235851466 -14836388 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 189 258 89 81 chr2 235851595 235851623 -14836231 + MIR3 SINE MIR 81 107 -101 1546 195 55 63 chr2 235851623 235852038 -14835816 + MER92A LTR ERV1 1 412 0 189 258 89 81 chr2 235852038 235852133 -14835721 + MIR3 SINE MIR 107 205 -3 384 22 0 0 chr2 235852348 235852393 -14835461 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 290 212 45 0 chr2 235853305 235853371 -14834483 + HAL1 LINE L1 1477 1545 -962 2277 90 3 7 chr2 235853379 235853690 -14834164 - AluSg SINE Alu 0 310 1 22 35 0 0 chr2 235853692 235853721 -14834133 + AT_rich Low_complexity Low_complexity 1 29 0 1147 105 0 0 chr2 235853721 235853874 -14833980 - L1PA16 LINE L1 -9 6157 6005 285 247 0 14 chr2 235853874 235853947 -14833907 + L1MDa LINE L1 1840 1911 -4629 252 343 30 15 chr2 235854097 235854231 -14833623 - MIR3 SINE MIR -4 204 69 2265 89 17 0 chr2 235854572 235854865 -14832989 + AluSp SINE Alu 1 298 -15 1637 182 3 31 chr2 235854945 235855264 -14832590 - AluJb SINE Alu -2 310 1 2123 138 0 3 chr2 235855282 235855594 -14832260 - AluSx SINE Alu -1 311 1 943 186 0 6 chr2 235855727 235855883 -14831971 + FRAM SINE Alu 2 156 -20 21 0 0 0 chr2 235855886 235855907 -14831947 + AT_rich Low_complexity Low_complexity 1 21 0 560 256 90 62 chr2 235855907 235856329 -14831525 - L1ME4a LINE L1 -37 6084 5651 587 238 109 52 chr2 235857171 235857200 -14830654 + L1ME LINE L1 5563 5589 -532 2135 112 7 0 chr2 235857200 235857487 -14830367 - AluSx SINE Alu -23 289 1 587 238 109 52 chr2 235857487 235857705 -14830149 + L1ME LINE L1 5589 5824 -297 22 0 0 0 chr2 235857907 235857929 -14829925 + AT_rich Low_complexity Low_complexity 1 22 0 2391 93 0 3 chr2 235858357 235858669 -14829185 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr2 235858717 235858739 -14829115 + AT_rich Low_complexity Low_complexity 1 22 0 1918 129 43 30 chr2 235858875 235859178 -14828676 - AluSx SINE Alu -5 307 1 290 348 32 19 chr2 235860520 235860678 -14827176 + L2 LINE L2 2305 2464 -850 225 0 0 0 chr2 235860780 235860805 -14827049 + (A)n Simple_repeat Simple_repeat 1 25 0 295 130 0 0 chr2 235860805 235860851 -14827003 + L1ME3 LINE L1 6116 6161 -1 207 0 0 0 chr2 235861410 235861433 -14826421 + (T)n Simple_repeat Simple_repeat 1 23 0 629 240 18 9 chr2 235861686 235861864 -14825990 - MER20B DNA MER1_type -5 214 34 277 280 13 0 chr2 235861915 235861990 -14825864 - MER116 DNA Mariner 0 80 5 319 276 48 29 chr2 235863664 235863769 -14824085 - MIR SINE MIR -72 136 30 1755 173 3 33 chr2 235865707 235866013 -14821841 + AluJb SINE Alu 1 297 -15 2860 223 62 63 chr2 235867622 235867882 -14819972 + L1 LINE L1 2256 2515 -3631 1724 90 25 16 chr2 235867882 235868126 -14819728 - AluSq SINE Alu -2 311 66 2860 223 62 63 chr2 235868126 235868496 -14819358 + L1 LINE L1 2515 2888 -3258 1965 143 14 0 chr2 235868496 235868803 -14819051 + AluSx SINE Alu 1 311 0 2860 223 62 63 chr2 235868803 235869153 -14818701 + L1 LINE L1 2888 3237 -2909 582 241 218 37 chr2 235869203 235869503 -14818351 + L1 LINE L1 3739 4085 -2061 2071 97 3 17 chr2 235869512 235869810 -14818044 + AluY SINE Alu 1 294 -17 215 30 0 30 chr2 235869815 235869848 -14818006 + (GAAA)n Simple_repeat Simple_repeat 3 34 0 197 77 51 0 chr2 235870839 235870878 -14816976 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1750 181 17 0 chr2 235870986 235871284 -14816570 - AluSx SINE Alu -9 303 1 693 220 0 0 chr2 235871574 235871706 -14816148 - FLAM_C SINE Alu -1 132 1 1438 116 19 5 chr2 235872088 235872304 -14815550 - AluSg/x SINE Alu -9 303 85 243 125 0 0 chr2 235872436 235872476 -14815378 + (GA)n Simple_repeat Simple_repeat 2 41 0 567 259 75 54 chr2 235872476 235872715 -14815139 - L2 LINE L2 -121 3192 2949 2067 139 3 0 chr2 235872718 235873020 -14814834 + AluSx SINE Alu 1 303 -9 428 340 25 15 chr2 235873043 235873240 -14814614 - L2 LINE L2 -811 2503 2305 189 295 77 13 chr2 235874919 235874997 -14812857 - MIR SINE MIR -68 140 58 539 303 71 34 chr2 235875078 235875375 -14812479 - L3 LINE CR1 -1 1576 1269 458 260 52 32 chr2 235875872 235876026 -14811828 - MIR SINE MIR -81 181 25 2106 128 7 0 chr2 235876153 235876458 -14811396 - AluSq SINE Alu -5 308 2 204 265 20 0 chr2 235876545 235876594 -14811260 + L2 LINE L2 3217 3266 -6 209 156 0 22 chr2 235877036 235877081 -14810773 + CT-rich Low_complexity Low_complexity 3 46 0 * 269 123 0 18 chr2 235877080 235877137 -14810717 + (TA)n Simple_repeat Simple_repeat 1 56 0 1735 156 4 0 chr2 235877137 235877412 -14810442 - AluJb SINE Alu -26 286 11 862 257 0 16 chr2 235877748 235877935 -14809919 - MER5A DNA MER1_type 0 189 6 627 161 54 0 chr2 235878043 235878155 -14809699 - MLT1A1 LTR MaLR 0 365 248 1591 213 81 20 chr2 235878155 235878539 -14809315 - L1MC4 LINE L1 -181 7861 7443 2262 99 3 13 chr2 235878539 235878851 -14809003 - AluSc SINE Alu 0 309 1 1591 213 81 20 chr2 235878851 235878921 -14808933 - L1MC4 LINE L1 -599 7443 7379 1179 186 20 0 chr2 235878922 235879126 -14808728 - AluJo SINE Alu -100 212 5 473 242 46 64 chr2 235879342 235879561 -14808293 - MER113 DNA MER1_type? -3 518 304 236 149 21 0 chr2 235879562 235879609 -14808245 + CT-rich Low_complexity Low_complexity 3 50 0 202 385 33 8 chr2 235892356 235892478 -14795376 - MIR SINE MIR -61 147 23 189 207 17 103 chr2 235892436 235892494 -14795360 + MER5A DNA MER1_type 60 112 -77 * 264 59 0 0 chr2 235892495 235892529 -14795325 + (A)n Simple_repeat Simple_repeat 1 34 0 256 279 55 147 chr2 235892709 235893165 -14794689 + L2 LINE L2 2283 2696 -618 392 314 138 32 chr2 235893321 235893668 -14794186 + L2 LINE L2 2930 3313 0 29 28 0 0 chr2 235893888 235893924 -14793930 + AT_rich Low_complexity Low_complexity 1 36 0 1856 149 44 0 chr2 235893924 235894199 -14793655 - AluSx SINE Alu -25 287 1 2300 272 205 11 chr2 235894529 235894959 -14792895 + L2 LINE L2 1730 2076 -1237 1754 81 0 9 chr2 235894959 235895223 -14792631 + AluSg/x SINE Alu 65 326 0 2300 272 205 11 chr2 235895223 235896126 -14791728 + L2 LINE L2 2076 3313 0 2357 72 0 19 chr2 235896319 235896626 -14791228 - AluY SINE Alu -10 301 1 1681 159 94 0 chr2 235897480 235897757 -14790097 - AluSx SINE Alu -7 305 3 2009 125 17 41 chr2 235897857 235898202 -14789652 - MER1B DNA MER1_type 0 337 1 1653 209 0 7 chr2 235898748 235899050 -14788804 + AluJo SINE Alu 3 302 -10 29 0 0 0 chr2 235899097 235899126 -14788728 + AT_rich Low_complexity Low_complexity 1 29 0 1844 135 11 4 chr2 235899126 235899392 -14788462 - AluSq SINE Alu -45 268 1 492 298 126 33 chr2 235899502 235900107 -14787747 - L1MC/D LINE L1 -757 5389 4877 380 325 199 18 chr2 235901052 235901510 -14786344 - L2 LINE L2 -873 2441 1901 2264 119 3 0 chr2 235902048 235902359 -14785495 - AluSx SINE Alu 0 312 1 5004 204 53 33 chr2 235902490 235902926 -14784928 + Charlie1a DNA MER1_type 1 427 -2334 2061 109 34 60 chr2 235902926 235903311 -14784543 + THE1C LTR MaLR 1 375 0 5004 204 53 33 chr2 235903311 235904284 -14783570 + Charlie1a DNA MER1_type 427 1438 -17 1824 233 123 15 chr2 235904341 235904958 -14782896 - L1MDb LINE L1 -5056 1487 804 564 261 22 17 chr2 235905329 235905509 -14782345 - L1MDb LINE L1 -6326 214 34 34 24 0 0 chr2 235905532 235905573 -14782281 + AT_rich Low_complexity Low_complexity 1 41 0 1244 179 103 3 chr2 235905961 235906263 -14781591 - L1MC3 LINE L1 -6 7779 7448 871 104 8 8 chr2 235906268 235906402 -14781452 - AluSp/q SINE Alu 0 313 180 2072 153 0 0 chr2 235906641 235906942 -14780912 + AluSx SINE Alu 1 301 -11 727 164 0 41 chr2 235906971 235907120 -14780734 + FLAM_C SINE Alu 1 144 0 208 178 89 0 chr2 235908533 235908578 -14779276 + L2 LINE L2 3214 3262 -10 394 291 78 0 chr2 235909308 235909449 -14778405 + MIR SINE MIR 105 256 -6 973 208 219 119 chr2 235909516 235909876 -14777978 - MLT1A1 LTR MaLR 0 396 1 345 263 20 0 chr2 235911041 235911140 -14776714 + MER94 DNA DNA 15 115 -19 188 328 47 16 chr2 235911173 235911237 -14776617 - L2 LINE L2 -4 3309 3244 1996 159 57 55 chr2 235912109 235912444 -14775410 - MLT1C LTR MaLR -6 461 123 2356 88 0 3 chr2 235912444 235912740 -14775114 - AluSp SINE Alu -18 295 1 1996 159 57 55 chr2 235912740 235912862 -14774992 - MLT1C LTR MaLR -344 123 3 2034 96 7 14 chr2 235913294 235913576 -14774278 + AluSg SINE Alu 1 280 -30 1979 118 0 21 chr2 235913690 235914003 -14773851 + AluSx SINE Alu 1 307 0 230 245 0 0 chr2 235914229 235914278 -14773576 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 318 290 135 26 chr2 235914315 235914426 -14773428 - MIR SINE MIR -13 249 151 2209 87 3 48 chr2 235914426 235914735 -14773119 + AluSx SINE Alu 1 295 -17 318 290 135 26 chr2 235914735 235914816 -14773038 - MIR SINE MIR -111 151 36 321 315 0 0 chr2 235917479 235917568 -14770286 + L1MC4 LINE L1 6615 6703 -1339 319 242 0 63 chr2 235917504 235917599 -14770255 - L1MC4 LINE L1 -1339 6703 6615 * 290 214 11 0 chr2 235917605 235917694 -14770160 + (TA)n Simple_repeat Simple_repeat 1 90 0 417 181 0 0 chr2 235917694 235917766 -14770088 - MLT1B LTR MaLR -318 72 1 225 211 0 0 chr2 235918367 235918424 -14769430 + (CTATA)n Simple_repeat Simple_repeat 1 57 0 1045 80 0 0 chr2 235918527 235918664 -14769190 - AluSg/x SINE Alu -4 308 172 411 73 0 0 chr2 235920168 235920176 -14767678 + (TCTG)n Simple_repeat Simple_repeat 1 63 0 411 73 0 0 chr2 235920176 235920231 -14767623 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 222 37 0 0 chr2 235920291 235920318 -14767536 + (TC)n Simple_repeat Simple_repeat 2 28 0 645 123 0 0 chr2 235923415 235923521 -14764333 + (TCTA)n Simple_repeat Simple_repeat 1 106 0 2382 85 0 0 chr2 235923557 235923862 -14763992 - AluY SINE Alu -6 305 1 967 31 16 0 chr2 235924413 235924540 -14763314 + (TCCA)n Simple_repeat Simple_repeat 4 132 0 241 271 57 0 chr2 235924543 235924613 -14763241 - L2 LINE L2 -13 3300 3227 1948 160 0 3 chr2 235925232 235925539 -14762315 + AluJo SINE Alu 3 308 -4 34 0 0 0 chr2 235925903 235925937 -14761917 + AT_rich Low_complexity Low_complexity 1 34 0 405 281 70 16 chr2 235926601 235926729 -14761125 - L2 LINE L2 0 3272 3138 21 0 0 0 chr2 235926971 235926992 -14760862 + AT_rich Low_complexity Low_complexity 1 21 0 2141 112 6 13 chr2 235926992 235927304 -14760550 - AluSx SINE Alu -2 310 1 252 0 0 0 chr2 235927631 235927659 -14760195 + (T)n Simple_repeat Simple_repeat 1 28 0 1717 155 50 4 chr2 235928209 235928487 -14759367 + AluJo SINE Alu 1 291 -21 280 328 78 26 chr2 235929820 235930012 -14757842 + L3 LINE CR1 1373 1574 -3 1964 103 0 24 chr2 235930847 235931137 -14756717 + AluSx SINE Alu 1 283 -29 216 0 0 0 chr2 235931146 235931170 -14756684 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 955 215 36 39 chr2 235931370 235931649 -14756205 - L1MA10 LINE L1 -1 6333 6056 715 280 47 8 chr2 235931681 235931917 -14755937 - MIR SINE MIR 0 262 18 1997 166 0 7 chr2 235932041 235932349 -14755505 + AluJb SINE Alu 1 306 -6 2267 165 63 8 chr2 235932511 235933003 -14754851 - L1MA9 LINE L1 0 6312 5794 11780 128 39 20 chr2 235933014 235935078 -14752776 + Tigger1 DNA MER2_type 1 2102 -316 237 118 0 0 chr2 235935074 235935108 -14752746 + Tigger1 DNA MER2_type 2385 2418 0 * 576 165 0 28 chr2 235935122 235935231 -14752623 + L1M2 LINE L1 5683 5788 -524 221 296 24 0 chr2 235935232 235935357 -14752497 + (TA)n Simple_repeat Simple_repeat 2 129 0 1391 133 4 17 chr2 235935360 235935600 -14752254 - L1MA9 LINE L1 -521 5791 5555 1308 196 7 79 chr2 235935600 235936004 -14751850 - L1MA9 LINE L1 -890 5256 4882 348 24 0 0 chr2 235936634 235936675 -14751179 + (TG)n Simple_repeat Simple_repeat 1 41 0 1399 158 0 14 chr2 235936937 235937152 -14750702 + AluJb SINE Alu 97 308 -4 37 32 0 16 chr2 235938327 235938371 -14749483 + AT_rich Low_complexity Low_complexity 1 45 -16 2363 76 0 0 chr2 235938371 235938660 -14749194 - AluY SINE Alu -22 289 1 37 32 0 16 chr2 235938660 235938677 -14749177 + AT_rich Low_complexity Low_complexity 45 61 0 21 0 0 0 chr2 235938875 235938896 -14748958 + AT_rich Low_complexity Low_complexity 1 21 0 203 190 86 35 chr2 235939261 235939319 -14748535 - MER5A DNA MER1_type -117 72 12 204 292 0 15 chr2 235940048 235940113 -14747741 - L2 LINE L2 -26 3287 3224 * 675 191 52 52 chr2 235940104 235940277 -14747577 - MIR SINE MIR -4 258 86 273 331 87 106 chr2 235940398 235940652 -14747202 - L2 LINE L2 -3 3269 3021 507 367 135 17 chr2 235940936 235941587 -14746267 - L2 LINE L2 -459 2855 2128 231 121 0 45 chr2 235943681 235943747 -14744107 + (TCCC)n Simple_repeat Simple_repeat 1 63 0 512 223 82 0 chr2 235944709 235944888 -14742966 - L1MB7 LINE L1 -61 6123 5924 2243 77 0 3 chr2 235945806 235946093 -14741761 - AluY SINE Alu -25 286 1 2328 102 0 0 chr2 235947581 235947885 -14739969 - AluSx SINE Alu -8 304 1 429 70 0 0 chr2 235949270 235949327 -14738527 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 197 169 35 35 chr2 235949371 235949513 -14738341 + (TA)n Simple_repeat Simple_repeat 1 142 0 2154 208 75 7 chr2 235949551 235949994 -14737860 - MLT2B3 LTR ERVL -81 473 1 1453 186 13 80 chr2 235950207 235950508 -14737346 + AluJo SINE Alu 1 281 -31 342 0 0 0 chr2 235950533 235950571 -14737283 + (CA)n Simple_repeat Simple_repeat 2 39 0 406 267 193 30 chr2 235951520 235951672 -14736182 + MIR SINE MIR 28 222 -40 923 127 0 0 chr2 235951672 235951798 -14736056 + FLAM_C SINE Alu 1 126 -7 406 267 193 30 chr2 235951798 235951847 -14736007 + MIR SINE MIR 222 262 0 1643 155 34 8 chr2 235951851 235952116 -14735738 - AluJo SINE Alu -27 285 14 239 236 45 22 chr2 235952902 235952991 -14734863 - MLT1L LTR MaLR -150 465 375 383 277 100 8 chr2 235955252 235955382 -14732472 + MIR SINE MIR 1 142 -120 1585 130 50 128 chr2 235956077 235956273 -14731581 + MLT1B LTR MaLR 1 211 -179 369 0 0 0 chr2 235956273 235956314 -14731540 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2929 81 0 8 chr2 235956314 235956711 -14731143 - L1PA8 LINE L1 -17 6155 5762 1585 130 50 128 chr2 235956711 235956936 -14730918 + MLT1B LTR MaLR 209 390 0 2601 42 0 0 chr2 235958207 235958513 -14729341 - AluY SINE Alu -5 306 1 22 0 0 0 chr2 235958643 235958665 -14729189 + AT_rich Low_complexity Low_complexity 1 22 0 2346 177 81 10 chr2 235958667 235959188 -14728666 - MER90 LTR ERV1 0 614 57 219 339 70 37 chr2 235959253 235959495 -14728359 - L2 LINE L2 -2016 1298 1049 207 88 0 0 chr2 235960564 235960598 -14727256 + (TAGA)n Simple_repeat Simple_repeat 2 35 0 761 49 10 0 chr2 235960927 235961029 -14726825 + (TTCC)n Simple_repeat Simple_repeat 1 103 0 1208 164 24 61 chr2 235961038 235961331 -14726523 - MER90 LTR ERV1 -196 418 137 350 224 112 31 chr2 235961331 235961429 -14726425 - L2 LINE L2 -23 3249 3144 696 265 42 26 chr2 235961483 235961747 -14726107 - MLT2C1 LTR ERVL -50 347 80 333 233 0 0 chr2 235961748 235961808 -14726046 + AluJ/FLAM SINE Alu 1 60 -242 5786 106 65 11 chr2 235961808 235962803 -14725051 - L1PBa LINE L1 -4423 2440 1392 985 185 5 14 chr2 235962780 235962996 -14724858 - L1PBa LINE L1 -6647 216 3 * 23 33 0 0 chr2 235963070 235963100 -14724754 + AT_rich Low_complexity Low_complexity 1 30 0 620 223 27 27 chr2 235963147 235963295 -14724559 + MER5B DNA MER1_type 25 172 -6 1557 154 3 121 chr2 235963845 235964175 -14723679 + AluJo SINE Alu 1 291 -11 1715 199 123 44 chr2 235964341 235964844 -14723010 - MER44D DNA MER2_type -7 598 1 279 134 78 0 chr2 235965145 235965209 -14722645 - MLT2C1 LTR ERVL -332 65 7 817 391 16 50 chr2 235965681 235966001 -14721853 - MER3 DNA MER1_type 0 2371 2063 529 223 9 0 chr2 235965996 235966108 -14721746 - MER3 DNA MER1_type -60 149 37 * 1419 177 72 85 chr2 235966252 235966336 -14721518 - LTR8A LTR ERV1 0 727 643 2071 130 11 0 chr2 235966336 235966621 -14721233 + AluSg SINE Alu 1 288 -22 1419 177 72 85 chr2 235966621 235966983 -14720871 - LTR8A LTR ERV1 -84 643 287 852 152 8 0 chr2 235967024 235967229 -14720625 + FLAM_C SINE Alu 1 206 0 575 224 63 74 chr2 235967237 235967490 -14720364 - LTR8 LTR ERV1 -468 259 6 2327 73 20 17 chr2 235968819 235969119 -14718735 + AluSq SINE Alu 1 301 -12 2097 129 13 66 chr2 235969695 235970091 -14717763 + THE1C LTR MaLR 1 375 0 8626 104 97 45 chr2 235970091 235971492 -14716362 + THE1C-int LTR MaLR 1 1488 -92 2002 143 10 3 chr2 235971492 235971799 -14716055 + AluSx SINE Alu 1 309 -3 8626 104 97 45 chr2 235971799 235971896 -14715958 + THE1C-int LTR MaLR 1488 1578 -2 1439 147 11 18 chr2 235971936 235972208 -14715646 + THE1C LTR MaLR 100 369 -6 875 147 0 0 chr2 235972511 235972647 -14715207 + L1PB4 LINE L1 6006 6141 -15 2158 108 53 44 chr2 235973003 235973364 -14714490 + THE1B LTR MaLR 1 364 0 251 339 18 9 chr2 235973475 235973584 -14714270 - MIR SINE MIR -150 112 3 2069 135 53 31 chr2 235974084 235974440 -14713414 + THE1B LTR MaLR 1 364 0 2074 142 0 3 chr2 235974534 235974852 -14713002 - AluSx SINE Alu 0 312 1 351 260 26 0 chr2 235975402 235975479 -14712375 + MER5A DNA MER1_type 34 112 -77 21 0 0 0 chr2 235975772 235975793 -14712061 + AT_rich Low_complexity Low_complexity 1 21 0 560 302 69 13 chr2 235976529 235976761 -14711093 + MIR SINE MIR 6 250 -12 302 189 0 0 chr2 235977295 235977348 -14710506 + L1MC4 LINE L1 6652 6704 -1338 207 133 0 0 chr2 235977434 235977479 -14710375 + (T)n Simple_repeat Simple_repeat 1 45 0 448 15 0 30 chr2 235977479 235977545 -14710309 - L1PA2 LINE L1 0 6155 6092 473 138 4 2 chr2 235977755 235977986 -14709868 + AluSx SINE Alu 23 292 -20 396 250 184 0 chr2 235978051 235978415 -14709439 + L1MEc LINE L1 896 1372 -4938 512 217 63 14 chr2 235978443 235978586 -14709268 - MLT1G LTR MaLR 0 590 441 420 305 35 17 chr2 235978592 235978897 -14708957 - MLT1G LTR MaLR -235 320 19 929 168 0 0 chr2 235978916 235979059 -14708795 + FLAM_C SINE Alu 1 143 0 234 274 94 38 chr2 235979744 235979850 -14708004 - L2 LINE L2 -294 2978 2867 420 267 47 2 chr2 235980411 235980569 -14707285 - MIR SINE MIR -58 150 18 1859 158 3 3 chr2 235980606 235980898 -14706956 + AluJb SINE Alu 1 292 -20 1158 169 39 0 chr2 235981059 235981290 -14706564 - Tigger2 DNA MER2_type -1 2717 2478 309 132 0 0 chr2 235981290 235981343 -14706511 + MSTC LTR MaLR 328 380 -48 3717 167 45 8 chr2 235981448 235982166 -14705688 - Tigger2 DNA MER2_type -1974 744 1 464 294 101 1 chr2 235982789 235983012 -14704842 - L1MC/D LINE L1 -630 5612 5372 877 215 30 61 chr2 235983366 235983678 -14704176 - MLT1H1 LTR MaLR 0 555 237 3578 161 35 18 chr2 235983686 235984396 -14703458 + MER50 LTR ERV1 1 722 -12 233 176 15 59 chr2 235984767 235984835 -14703019 + LTR23 LTR ERV1 87 151 -286 801 232 6 0 chr2 235985139 235985303 -14702551 + MER45A DNA AcHobo 8 172 -6 1997 143 41 52 chr2 235985463 235985903 -14701951 - LTR23 LTR ERV1 0 437 3 5503 68 1 3 chr2 235985903 235986612 -14701242 - L1PA6 LINE L1 -2 6152 5445 25072 57 5 1 chr2 235986717 235990235 -14697619 - L1PA6 LINE L1 -682 5472 1942 961 209 16 126 chr2 235990240 235990440 -14697414 - LTR8A LTR ERV1 -349 378 240 1777 182 3 3 chr2 235990440 235990747 -14697107 + AluJo SINE Alu 1 307 -5 961 209 16 126 chr2 235990747 235990934 -14696920 - LTR8A LTR ERV1 -487 240 34 1112 172 19 0 chr2 235990966 235991175 -14696679 - MLT2B1 LTR ERVL -307 213 1 390 154 0 0 chr2 235991948 235992026 -14695828 + GA-rich Low_complexity Low_complexity 2 79 0 240 59 0 0 chr2 235995657 235995691 -14692163 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7577 30 0 0 chr2 235997394 235998296 -14689558 + L1PA4 LINE L1 5254 6155 0 2197 155 22 33 chr2 235998308 235998759 -14689095 + L1MA9 LINE L1 5853 6298 -14 180 0 0 0 chr2 235998827 235998847 -14689007 + (T)n Simple_repeat Simple_repeat 1 20 0 1950 184 37 7 chr2 235999408 235999816 -14688038 - L1MA6 LINE L1 -57 6243 5824 1821 166 3 0 chr2 235999815 236000159 -14687695 + L1 LINE L1 4726 5070 -1076 * 2607 224 33 26 chr2 236000180 236000464 -14687390 - L1M4 LINE L1 -825 5321 5040 2181 130 7 0 chr2 236000464 236000764 -14687090 - AluSx SINE Alu -10 302 1 2607 224 33 26 chr2 236000764 236001277 -14686577 - L1M4 LINE L1 -1106 5040 4519 624 248 53 16 chr2 236001277 236001580 -14686274 - L1MEd LINE L1 -4731 1400 1131 676 299 40 19 chr2 236001663 236002088 -14685766 - L1MEc LINE L1 -5465 931 498 386 302 87 12 chr2 236002212 236002384 -14685470 - L1MEc LINE L1 -6094 302 118 2259 103 0 17 chr2 236002414 236002716 -14685138 + AluSx SINE Alu 1 297 -15 1340 279 66 50 chr2 236002856 236003673 -14684181 - L1MEd LINE L1 -5156 963 134 949 143 23 94 chr2 236003876 236004053 -14683801 - L1MA7 LINE L1 -5 6286 6133 1809 161 16 10 chr2 236004053 236004357 -14683497 + AluJb SINE Alu 1 306 -6 949 143 23 94 chr2 236004357 236004445 -14683409 - L1MA7 LINE L1 -158 6133 6040 2158 107 14 0 chr2 236004565 236004854 -14683000 - AluSg1 SINE Alu -16 293 1 284 320 103 29 chr2 236004926 236005101 -14682753 - MIR SINE MIR -1 261 74 4727 34 0 2 chr2 236006229 236006791 -14681063 - L1PA3 LINE L1 0 6155 5595 207 91 0 68 chr2 236007250 236007294 -14680560 + (TTA)n Simple_repeat Simple_repeat 2 42 0 790 90 0 0 chr2 236007474 236007585 -14680269 - L1PA5 LINE L1 -3 6151 6041 1304 156 35 0 chr2 236008471 236008727 -14679127 - L1MC/D LINE L1 -761 5583 5319 930 169 0 3 chr2 236008732 236009091 -14678763 + (TA)n Simple_repeat Simple_repeat 2 359 0 35280 52 7 0 chr2 236009091 236014577 -14673277 - L1PA5 LINE L1 -11 6143 623 666 81 0 0 chr2 236014577 236014663 -14673191 - L1PA5 LINE L1 -6050 96 11 2337 112 0 0 chr2 236015905 236016208 -14671646 + AluSx SINE Alu 1 303 -9 688 180 29 37 chr2 236016910 236017155 -14670699 + L1MB8 LINE L1 5887 6173 -5 25 0 0 0 chr2 236017157 236017182 -14670672 + AT_rich Low_complexity Low_complexity 1 25 0 252 245 82 82 chr2 236017210 236017308 -14670546 - MER5B DNA MER1_type -59 119 22 203 175 0 16 chr2 236017406 236017469 -14670385 + (TTTG)n Simple_repeat Simple_repeat 2 63 0 2316 99 3 10 chr2 236017855 236018169 -14669685 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 236018775 236018800 -14669054 + AT_rich Low_complexity Low_complexity 1 25 0 365 265 128 0 chr2 236020743 236020845 -14667009 - L2 LINE L2 -3 3269 3155 2502 258 76 7 chr2 236021660 236022408 -14665446 + MER69 DNA AcHobo 2 801 -425 228 169 15 46 chr2 236022409 236022474 -14665380 + MER69 DNA AcHobo 2017 2079 -447 13804 30 0 1 chr2 236022488 236024892 -14662962 - L1PA4 LINE L1 -3 6152 3750 1805 169 38 56 chr2 236025713 236026272 -14661582 - MER67C LTR ERV1 -1 513 1 458 236 28 0 chr2 236026802 236026908 -14660946 + MER5A DNA MER1_type 4 112 -77 771 301 142 18 chr2 236027259 236027647 -14660207 + MLT1K LTR MaLR 100 535 -53 23 0 0 0 chr2 236027835 236027858 -14659996 + AT_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr2 236028248 236028297 -14659557 + AT_rich Low_complexity Low_complexity 1 49 0 2012 121 18 87 chr2 236029387 236029776 -14658078 + THE1B LTR MaLR 2 363 -1 479 246 60 65 chr2 236029815 236030014 -14657840 - MIR SINE MIR 0 262 65 2331 92 13 0 chr2 236031178 236031483 -14656371 + AluSc SINE Alu 1 309 0 1828 185 0 25 chr2 236031973 236032329 -14655525 + MER7A DNA MER2_type 2 346 0 1201 206 40 69 chr2 236033653 236033727 -14654127 - MER69 DNA AcHobo -1 2525 2450 2282 92 0 19 chr2 236033727 236034042 -14653812 + AluSc SINE Alu 1 309 0 21 0 0 0 chr2 236034042 236034063 -14653791 + AT_rich Low_complexity Low_complexity 1 21 0 1201 206 40 69 chr2 236034063 236034345 -14653509 - MER69 DNA AcHobo -74 2452 2159 30541 51 6 5 chr2 236034388 236038158 -14649696 + L1P LINE L1 1 3773 -2373 842 267 23 14 chr2 236038266 236038483 -14649371 + MIR SINE MIR 44 262 0 2101 121 3 0 chr2 236038806 236039119 -14648735 - AluSq SINE Alu 0 314 1 201 351 42 42 chr2 236039784 236039952 -14647902 + L2 LINE L2 3142 3309 -4 753 57 64 55 chr2 236039956 236040011 -14647843 - L1MC/D LINE L1 -648 5520 5467 2272 126 0 0 chr2 236040011 236040313 -14647541 - AluSx SINE Alu -10 302 1 753 57 64 55 chr2 236040313 236040386 -14647468 - L1MC/D LINE L1 -701 5467 5406 2581 99 24 44 chr2 236040696 236041079 -14646775 + THE1C LTR MaLR 1 375 0 2330 236 53 47 chr2 236042886 236043487 -14644367 + MER77 LTR ERV1 1 605 0 772 146 0 49 chr2 236043721 236043844 -14644010 + FLAM_C SINE Alu 14 130 -13 312 330 76 0 chr2 236044215 236044333 -14643521 + L2 LINE L2 3141 3267 -5 1928 206 85 48 chr2 236044435 236044974 -14642880 + MER92B LTR ERV1 27 585 -51 1065 148 6 142 chr2 236045001 236045145 -14642709 + MER92B LTR ERV1 363 442 -194 189 0 0 0 chr2 236045145 236045166 -14642688 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1065 148 6 142 chr2 236045166 236045338 -14642516 + MER92B LTR ERV1 442 636 0 1297 184 14 0 chr2 236045740 236045952 -14641902 + MER20 DNA MER1_type 1 215 -4 262 380 43 0 chr2 236048115 236048207 -14639647 - L3 LINE CR1 -98 1479 1384 211 257 40 40 chr2 236048811 236048885 -14638969 - MIR SINE MIR -35 227 154 248 184 20 0 chr2 236049002 236049051 -14638803 + L2 LINE L2 3258 3307 -6 34 0 0 0 chr2 236049273 236049307 -14638547 + AT_rich Low_complexity Low_complexity 1 34 0 265 116 23 0 chr2 236049704 236049747 -14638107 + L2 LINE L2 3264 3307 -6 318 225 67 0 chr2 236049793 236049882 -14637972 + Charlie7 DNA MER1_type 589 683 -1929 2335 109 0 3 chr2 236050193 236050504 -14637350 + AluSg SINE Alu 1 310 0 571 213 100 20 chr2 236052134 236052284 -14635570 - MER5B DNA MER1_type -7 171 10 2284 98 0 0 chr2 236052456 236052753 -14635101 + L1PB1 LINE L1 5855 6151 0 339 267 42 89 chr2 236053273 236053464 -14634390 - MER5A DNA MER1_type -7 182 1 362 236 57 28 chr2 236053571 236053677 -14634177 + L2 LINE L2 3181 3289 -24 1630 204 159 67 chr2 236055641 236055789 -14632065 + MLT1E2 LTR MaLR 21 154 -472 2041 123 0 36 chr2 236055789 236056091 -14631763 - AluSx SINE Alu -21 291 1 1630 204 159 67 chr2 236056091 236056495 -14631359 + MLT1E2 LTR MaLR 154 624 -2 27 0 0 0 chr2 236057954 236057981 -14629873 + AT_rich Low_complexity Low_complexity 1 27 0 190 326 124 16 chr2 236059126 236059255 -14628599 + L2 LINE L2 1538 1680 -1634 251 276 26 85 chr2 236059264 236059418 -14628436 + MER5A DNA MER1_type 12 167 -22 235 313 157 47 chr2 236059695 236060097 -14627757 + L2 LINE L2 2048 2493 -821 283 167 0 0 chr2 236060129 236060183 -14627671 + MADE1 DNA Mariner 26 79 -1 187 324 97 35 chr2 236060321 236060466 -14627388 + L2 LINE L2 2602 2755 -559 22 0 0 0 chr2 236060839 236060861 -14626993 + AT_rich Low_complexity Low_complexity 1 22 0 247 154 0 0 chr2 236061261 236061300 -14626554 - LTR40b LTR ERVL -7 455 417 1781 154 33 0 chr2 236061308 236061604 -14626250 - AluSx SINE Alu 0 305 1 635 309 51 36 chr2 236061910 236062243 -14625611 + LTR16A LTR ERVL 113 450 0 23 0 0 0 chr2 236062343 236062366 -14625488 + AT_rich Low_complexity Low_complexity 1 23 0 202 213 64 0 chr2 236063202 236063249 -14624605 - MIR3 SINE MIR -2 206 157 1487 133 65 12 chr2 236063249 236063497 -14624357 - L1MC1 LINE L1 -188 6145 5885 1189 65 0 0 chr2 236063504 236063643 -14624211 + AluSq/x SINE Alu 1 139 -174 2156 91 7 0 chr2 236063643 236063968 -14623886 + AluY SINE Alu 1 311 0 330 157 0 0 chr2 236063977 236064028 -14623826 - L1MC1 LINE L1 -455 5878 5828 830 156 17 11 chr2 236114033 236114212 -14573642 + CT-rich Low_complexity Low_complexity 1 180 0 180 111 0 0 chr2 236114231 236114258 -14573596 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 1933 151 9 25 chr2 236114270 236114588 -14573266 - AluSq SINE Alu 0 313 1 2600 195 59 20 chr2 236114590 236115462 -14572392 - L1MB7 LINE L1 -355 6545 5631 26 74 0 0 chr2 236116079 236116133 -14571721 + AT_rich Low_complexity Low_complexity 1 54 0 189 254 17 51 chr2 236116834 236116893 -14570961 - L2 LINE L2 0 3313 3257 2682 204 74 14 chr2 236117361 236118073 -14569781 - L1MB7 LINE L1 -6103 760 6 266 270 0 0 chr2 236119489 236119552 -14568302 - MLT1K LTR MaLR -384 204 142 341 329 103 24 chr2 236119703 236119916 -14567938 - LTR16C LTR ERVL -2 489 260 432 303 134 12 chr2 236120309 236120652 -14567202 + Charlie7 DNA MER1_type 99 483 -2129 286 333 44 19 chr2 236120719 236121151 -14566703 - L1MEd LINE L1 -3420 2709 2267 679 114 9 0 chr2 236121178 236121283 -14566571 - AluSp SINE Alu -32 281 176 276 243 0 14 chr2 236121284 236121358 -14566496 - AluSp SINE Alu -165 138 66 634 57 75 34 chr2 236121459 236121744 -14566110 + (TTATA)n Simple_repeat Simple_repeat 1 296 0 220 188 25 38 chr2 236121759 236121839 -14566015 + (TA)n Simple_repeat Simple_repeat 1 79 0 514 114 0 67 chr2 236121855 236121960 -14565894 + MER4A LTR ERV1 1 98 -566 1326 158 113 8 chr2 236121960 236122271 -14565583 + MER4A LTR ERV1 263 664 0 308 103 17 0 chr2 236122414 236122472 -14565382 + (TA)n Simple_repeat Simple_repeat 2 60 0 269 290 31 62 chr2 236122692 236122854 -14565000 - L1ME LINE L1 -513 5657 5501 2235 204 34 62 chr2 236123091 236123659 -14564195 + MLT2B3 LTR ERVL 1 552 -2 1610 180 153 24 chr2 236123786 236124164 -14563690 - MSTA LTR MaLR 0 428 2 429 244 101 34 chr2 236124168 236124406 -14563448 - L1MEd LINE L1 -4883 1236 983 790 211 11 22 chr2 236124474 236124654 -14563200 + MER5B DNA MER1_type 1 178 0 3362 210 13 23 chr2 236124944 236125635 -14562219 - L1PA13 LINE L1 -6103 684 1 6964 143 38 7 chr2 236125647 236127520 -14560334 - L1PA15-16 LINE L1 -4270 2579 29 207 259 19 0 chr2 236127693 236127747 -14560107 - L2 LINE L2 -2 3311 3257 690 241 39 15 chr2 236127932 236128135 -14559719 - L1ME LINE L1 -1172 4974 4767 21 89 0 0 chr2 236129345 236129401 -14558453 + AT_rich Low_complexity Low_complexity 1 56 0 249 209 163 0 chr2 236130464 236130550 -14557304 - L1ME1 LINE L1 -25 6141 6042 198 71 0 0 chr2 236130565 236130593 -14557261 + (T)n Simple_repeat Simple_repeat 1 28 0 2330 103 0 6 chr2 236131370 236131681 -14556173 - AluSx SINE Alu -3 309 1 1205 257 48 8 chr2 236132733 236133106 -14554748 - MER97c DNA MER1_type? -580 510 123 359 303 92 7 chr2 236133629 236133974 -14553880 + LTR33 LTR ERVL 51 454 -67 22 0 0 0 chr2 236134236 236134258 -14553596 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 236134258 236134281 -14553573 + (TA)n Simple_repeat Simple_repeat 1 23 0 843 180 0 0 chr2 236134282 236134421 -14553433 - FLAM_C SINE Alu -3 140 2 5392 226 20 19 chr2 236134422 236134873 -14552981 - L1PA13 LINE L1 -4288 2509 2060 2271 107 51 25 chr2 236134873 236135228 -14552626 - THE1B LTR MaLR 0 364 1 5392 226 20 19 chr2 236135228 236136209 -14551645 - L1PA13 LINE L1 -4737 2060 1059 289 331 83 35 chr2 236136456 236136601 -14551253 + MIR SINE MIR 111 262 0 538 307 74 48 chr2 236137104 236137709 -14550145 - L1ME3A LINE L1 -278 5884 5264 5656 128 9 8 chr2 236137739 236139605 -14548249 - L1PA16 LINE L1 -7 6159 4284 260 116 23 0 chr2 236139608 236139651 -14548203 - L1 LINE L1 -1869 4277 4234 * 1909 212 10 10 chr2 236139648 236140058 -14547796 + L1P LINE L1 3805 4214 -1932 297 0 0 0 chr2 236140070 236140103 -14547751 + (TG)n Simple_repeat Simple_repeat 2 34 0 * 387 0 0 0 chr2 236140102 236140145 -14547709 + (TA)n Simple_repeat Simple_repeat 2 44 0 1564 160 23 0 chr2 236140312 236140568 -14547286 - HUERS-P3 LTR ERV1 -7778 1141 880 2012 242 11 31 chr2 236140663 236141183 -14546671 - HUERS-P3 LTR ERV1 -6908 510 1 3418 114 45 95 chr2 236141183 236141857 -14545997 - LTR9B LTR ERV1 0 644 5 685 258 28 6 chr2 236142237 236142415 -14545439 - MIR SINE MIR -6 256 75 30 27 0 0 chr2 236143794 236143831 -14544023 + AT_rich Low_complexity Low_complexity 1 37 0 282 248 33 16 chr2 236144110 236144231 -14543623 + (TA)n Simple_repeat Simple_repeat 2 124 0 351 96 0 0 chr2 236144396 236144448 -14543406 + (GA)n Simple_repeat Simple_repeat 2 53 0 852 220 22 16 chr2 236144710 236144892 -14542962 + MER5A DNA MER1_type 1 183 -6 294 368 87 9 chr2 236144945 236145176 -14542678 + L2 LINE L2 157 405 -2909 22 56 0 0 chr2 236145449 236145485 -14542369 + AT_rich Low_complexity Low_complexity 1 36 0 2124 107 3 3 chr2 236145498 236145789 -14542065 - AluSg SINE Alu -19 291 1 566 238 48 77 chr2 236146379 236146627 -14541227 - MER112 DNA MER1_type -1 259 19 397 261 91 36 chr2 236146744 236146909 -14540945 - MER69 DNA AcHobo -2 2524 2351 619 228 52 0 chr2 236147033 236147169 -14540685 - MER69 DNA AcHobo -1050 176 34 1575 155 87 12 chr2 236147421 236147743 -14540111 + MLT2C1 LTR ERVL 1 346 -51 330 143 0 0 chr2 236147745 236147808 -14540046 + (TG)n Simple_repeat Simple_repeat 2 64 0 305 279 48 39 chr2 236148149 236148378 -14539476 + L1MEc LINE L1 1259 1489 -4907 565 304 102 27 chr2 236148654 236149065 -14538789 + L1MEc LINE L1 1875 2316 -4080 1071 113 0 0 chr2 236149125 236149267 -14538587 + AluSp SINE Alu 1 142 -171 216 289 114 26 chr2 236150595 236150709 -14537145 + MIR SINE MIR 65 188 -74 334 113 14 14 chr2 236151380 236151451 -14536403 + (TA)n Simple_repeat Simple_repeat 1 71 0 232 135 39 0 chr2 236151471 236151523 -14536331 + (TA)n Simple_repeat Simple_repeat 1 54 0 436 74 75 51 chr2 236151569 236151803 -14536051 + (TTATA)n Simple_repeat Simple_repeat 1 239 0 390 97 89 0 chr2 236151821 236151945 -14535909 + (TTATA)n Simple_repeat Simple_repeat 5 139 0 1341 168 153 37 chr2 236152148 236152475 -14535379 - MLT1A1 LTR MaLR 0 365 1 422 316 75 16 chr2 236152475 236152660 -14535194 - MIR SINE MIR -49 159 1 302 301 0 0 chr2 236152871 236152944 -14534910 + L2 LINE L2 3241 3313 0 387 357 91 0 chr2 236153028 236153227 -14534627 + MIR SINE MIR 2 218 -44 21 36 0 0 chr2 236153474 236153502 -14534352 + AT_rich Low_complexity Low_complexity 1 28 0 2054 98 6 47 chr2 236153709 236154027 -14533827 - AluSx SINE Alu -7 305 1 570 260 71 28 chr2 236154675 236154929 -14532925 - L1ME LINE L1 -580 5565 5301 495 268 124 40 chr2 236155017 236155636 -14532218 - L1ME LINE L1 -1315 4814 4144 538 301 61 81 chr2 236155651 236156328 -14531526 - L1ME LINE L1 -4865 1254 592 617 273 26 87 chr2 236156767 236157031 -14530823 - MIR SINE MIR -10 252 5 2176 198 49 0 chr2 236157434 236157879 -14529975 - MLT1C LTR MaLR 0 467 1 516 287 122 17 chr2 236157931 236158161 -14529693 - MIR SINE MIR 0 262 9 1770 183 3 0 chr2 236158331 236158632 -14529222 - AluJb SINE Alu -10 302 1 845 216 86 29 chr2 236158686 236158931 -14528923 - MER2 DNA MER2_type -1 344 86 466 202 18 9 chr2 236159150 236159259 -14528595 - AluSp SINE Alu -203 110 1 5058 146 9 9 chr2 236159263 236160353 -14527501 - L1PA16 LINE L1 -17 6149 5057 7610 221 20 58 chr2 236160353 236161068 -14526786 + L1 LINE L1 2960 3701 -2445 279 0 0 0 chr2 236161068 236161099 -14526755 + (CA)n Simple_repeat Simple_repeat 2 32 0 1867 168 0 3 chr2 236161105 236161397 -14526457 + AluJb SINE Alu 1 291 -21 7610 221 20 58 chr2 236161397 236162855 -14524999 + L1 LINE L1 3706 5057 -1089 618 170 11 0 chr2 236162866 236162960 -14524894 - MER2 DNA MER2_type -250 95 1 24 0 0 29 chr2 236163685 236163697 -14524157 + AT_rich Low_complexity Low_complexity 1 12 -22 1322 171 13 103 chr2 236163697 236164007 -14523847 + AluJo SINE Alu 1 282 -30 24 0 0 29 chr2 236164007 236164029 -14523825 + AT_rich Low_complexity Low_complexity 12 34 0 2212 139 58 12 chr2 236164214 236164646 -14523208 + L1MB3 LINE L1 1932 2383 -4001 2787 211 45 6 chr2 236164646 236165763 -14522091 + L1MB3 LINE L1 4915 6073 -346 2278 255 76 15 chr2 236166069 236166872 -14520982 - L1ME1 LINE L1 -176 6250 5400 1054 219 17 0 chr2 236166891 236167129 -14520725 - L1ME1 LINE L1 -1277 5129 4888 296 248 23 5 chr2 236167138 236167254 -14520600 - L1ME1 LINE L1 -4162 2267 2125 1563 257 54 50 chr2 236167376 236168170 -14519684 - L1ME1 LINE L1 -4437 1969 1173 812 117 0 0 chr2 236168171 236168282 -14519572 + AluSg/x SINE Alu 188 298 -14 456 313 38 69 chr2 236168284 236168732 -14519122 - L1ME1 LINE L1 -5230 1179 746 699 248 0 0 chr2 236168859 236169004 -14518850 + FRAM SINE Alu 2 146 -30 21 0 0 0 chr2 236169004 236169025 -14518829 + AT_rich Low_complexity Low_complexity 1 21 0 2090 103 3 20 chr2 236170244 236170546 -14517308 + AluSx SINE Alu 1 297 -15 30 103 0 0 chr2 236170976 236171083 -14516771 + AT_rich Low_complexity Low_complexity 1 107 0 229 239 112 88 chr2 236171272 236171477 -14516377 - L1MC/D LINE L1 -1924 5884 5675 415 213 180 25 chr2 236171477 236171599 -14516255 - MER58B DNA MER1_type -10 331 191 202 0 91 0 chr2 236171687 236171720 -14516134 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 2218 19 0 4 chr2 236171720 236171979 -14515875 - L1PA3 LINE L1 -10 6145 5888 32 26 0 0 chr2 236172520 236172559 -14515295 + AT_rich Low_complexity Low_complexity 1 39 0 242 308 60 43 chr2 236173458 236173575 -14514279 - MIR SINE MIR -20 242 124 234 0 0 0 chr2 236174425 236174451 -14513403 + (T)n Simple_repeat Simple_repeat 1 26 0 1944 257 99 33 chr2 236174588 236174644 -14513210 - L1MC4 LINE L1 -798 5348 5297 2202 108 3 7 chr2 236174644 236174951 -14512903 - AluSp SINE Alu -7 306 1 1944 257 99 33 chr2 236174951 236175599 -14512255 - L1MC4 LINE L1 -849 5297 4694 2265 131 16 13 chr2 236175599 236175973 -14511881 - THE1C LTR MaLR 0 375 1 1944 257 99 33 chr2 236175973 236176223 -14511631 - L1MC4 LINE L1 -1452 4694 4462 2182 101 0 7 chr2 236176223 236176521 -14511333 + AluSc SINE Alu 1 296 -13 1944 257 99 33 chr2 236176521 236176770 -14511084 - L1MC4 LINE L1 -1684 4462 5159 8257 43 4 0 chr2 236176770 236177735 -14510119 - LTR5 LTR ERVK 0 969 1 1944 257 99 33 chr2 236177735 236177925 -14509929 - L1MC4 LINE L1 -986 5160 4984 1856 211 51 7 chr2 236177921 236178579 -14509275 + L1MC/D LINE L1 4967 5642 -600 * 297 109 0 0 chr2 236179716 236179762 -14508092 + (TCTCTG)n Simple_repeat Simple_repeat 3 48 0 32 0 0 0 chr2 236180023 236180055 -14507799 + AT_rich Low_complexity Low_complexity 1 32 0 1791 49 4 0 chr2 236180055 236180281 -14507573 - L1PA5 LINE L1 -5 6149 5923 1956 204 25 5 chr2 236180576 236180979 -14506875 + LTR57 LTR ERVL 1 411 0 3942 140 25 21 chr2 236180979 236181094 -14506760 + LTR57-int LTR ERVL 1 114 -5229 2264 81 3 7 chr2 236181094 236181401 -14506453 - AluSx SINE Alu -6 306 1 3942 140 25 21 chr2 236181401 236182127 -14505727 + LTR57-int LTR ERVL 114 887 -4456 998 338 47 15 chr2 236182236 236182707 -14505147 + L2 LINE L2 1328 1813 -1501 1372 282 30 36 chr2 236182708 236183148 -14504706 + MER69 DNA AcHobo 75 513 -2013 2272 109 0 0 chr2 236183148 236183452 -14504402 + AluSx SINE Alu 1 304 -8 1372 282 30 36 chr2 236183452 236183508 -14504346 + MER69 DNA AcHobo 513 568 -1958 * 1645 205 74 34 chr2 236183506 236184003 -14503851 + MER69 DNA AcHobo 2010 2526 0 423 0 0 0 chr2 236184135 236184182 -14503672 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 314 253 20 10 chr2 236184183 236184282 -14503572 + (TA)n Simple_repeat Simple_repeat 1 100 0 231 329 87 13 chr2 236184767 236184916 -14502938 + MER117 DNA MER1_type 20 179 -18 355 298 41 73 chr2 236185069 236185287 -14502567 + L2 LINE L2 3099 3309 -4 2234 99 0 3 chr2 236185459 236185752 -14502102 - AluSg SINE Alu -18 292 1 2184 115 3 0 chr2 236186372 236186667 -14501187 + AluSq SINE Alu 1 296 -17 234 368 45 32 chr2 236187206 236187361 -14500493 + MER5A DNA MER1_type 11 167 -22 2127 114 3 3 chr2 236187628 236187927 -14499927 + AluSx SINE Alu 1 299 -13 975 54 78 0 chr2 236188382 236188511 -14499343 - MER85 DNA T2_type 0 139 1 201 239 0 22 chr2 236188801 236188847 -14499007 + GA-rich Low_complexity Low_complexity 1 45 0 2333 99 3 0 chr2 236189173 236189477 -14498377 - AluSq SINE Alu -8 305 1 2250 107 0 3 chr2 236190216 236190506 -14497348 - AluSq SINE Alu -24 289 1 221 279 209 0 chr2 236190822 236190908 -14496946 + MIR3 SINE MIR 77 180 -28 222 324 56 0 chr2 236191073 236191144 -14496710 - MIR SINE MIR -73 189 115 324 0 0 0 chr2 236191194 236191230 -14496624 + (TG)n Simple_repeat Simple_repeat 2 37 0 187 393 36 9 chr2 236191265 236191377 -14496477 - L2 LINE L2 -20 3293 3179 204 217 0 0 chr2 236192920 236192966 -14494888 + (CATA)n Simple_repeat Simple_repeat 4 49 0 6630 114 29 15 chr2 236193279 236194335 -14493519 - MER11C LTR ERVK 0 1071 1 670 272 82 17 chr2 236194387 236194619 -14493235 - MIR SINE MIR -8 254 8 212 368 0 0 chr2 236194770 236194846 -14493008 + CT-rich Low_complexity Low_complexity 3 78 0 508 121 41 10 chr2 236196044 236196147 -14491707 + MLT1A1 LTR MaLR 278 365 0 419 354 153 0 chr2 236196492 236196800 -14491054 - L3 LINE CR1 -11 1566 1212 324 259 84 14 chr2 236196994 236197137 -14490717 - L1MDb LINE L1 -4994 1414 1262 341 278 21 16 chr2 236197601 236197795 -14490059 - L1MDb LINE L1 -5093 1316 1122 24 32 0 0 chr2 236197924 236197955 -14489899 + AT_rich Low_complexity Low_complexity 1 31 0 318 387 111 12 chr2 236198317 236198560 -14489294 - L1MDb LINE L1 -5995 592 326 330 26 0 0 chr2 236198567 236198606 -14489248 + (CA)n Simple_repeat Simple_repeat 2 40 0 348 302 99 56 chr2 236198805 236198888 -14488966 - L3 LINE CR1 -530 1047 969 2813 135 17 0 chr2 236198888 236199309 -14488545 + MSTA LTR MaLR 1 428 0 348 302 99 56 chr2 236199309 236199477 -14488377 - L3 LINE CR1 -608 969 785 307 102 34 0 chr2 236199521 236199580 -14488274 - L1PA16 LINE L1 -9 6157 6097 * 496 199 3 0 chr2 236199558 236199668 -14488186 - L1PA16 LINE L1 -80 6085 5974 35 41 0 0 chr2 236200123 236200172 -14487682 + AT_rich Low_complexity Low_complexity 1 49 0 459 255 93 87 chr2 236201094 236201685 -14486169 + MLT1F LTR MaLR 5 555 0 188 324 36 27 chr2 236201793 236201904 -14485950 - MIR SINE MIR -76 186 75 380 286 26 7 chr2 236202428 236202582 -14485272 + MERVL LTR ERVL 3353 3509 -1976 512 338 126 33 chr2 236202719 236203061 -14484793 + MERVL LTR ERVL 3703 4116 -1538 1678 133 0 8 chr2 236203061 236203295 -14484559 - AluSx SINE Alu -55 257 26 512 338 126 33 chr2 236203295 236203499 -14484355 + MERVL LTR ERVL 4116 4300 -1354 257 341 72 29 chr2 236203634 236203910 -14483944 + MERVL LTR ERVL 4524 4811 -953 858 196 0 16 chr2 236203917 236204106 -14483748 + LTR41 LTR ERVL 2 187 -586 571 304 66 36 chr2 236204293 236204625 -14483229 + MERVL LTR ERVL 4613 4954 -810 361 286 25 34 chr2 236204625 236204744 -14483110 - L1MEc LINE L1 -4186 2210 2093 3697 273 93 32 chr2 236204844 236206802 -14481052 - L1MEc LINE L1 -4274 2122 45 759 327 61 9 chr2 236206813 236207143 -14480711 + MERVL LTR ERVL 4945 5291 -473 815 319 185 37 chr2 236207155 236207966 -14479888 + L2 LINE L2 221 1151 -2163 208 284 45 0 chr2 236208151 236208218 -14479636 - L2 LINE L2 -1327 1987 1918 882 61 30 15 chr2 236208447 236208578 -14479276 + AluSq/x SINE Alu 5 137 -175 1376 176 17 14 chr2 236208745 236209040 -14478814 + AluSq SINE Alu 5 300 -13 542 321 67 43 chr2 236209563 236209984 -14477870 + LTR16A LTR ERVL 27 457 0 214 184 41 41 chr2 236210974 236211023 -14476831 - MIR SINE MIR -182 80 32 210 316 0 0 chr2 236211422 236211498 -14476356 - L2 LINE L2 -968 2346 2271 1769 183 3 3 chr2 236211538 236211839 -14476015 - AluJo SINE Alu -11 301 1 21 0 0 0 chr2 236211870 236211891 -14475963 + AT_rich Low_complexity Low_complexity 1 21 0 33 0 0 0 chr2 236212102 236212135 -14475719 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr2 236212383 236212405 -14475449 + AT_rich Low_complexity Low_complexity 1 22 0 1421 190 21 18 chr2 236212825 236213157 -14474697 + L1MB3 LINE L1 5847 6179 -4 2702 197 54 0 chr2 236214318 236214851 -14473003 - LTR31 LTR ERV1 0 619 58 531 13 0 38 chr2 236214855 236214934 -14472920 + (CAAAA)n Simple_repeat Simple_repeat 3 78 0 23 0 0 0 chr2 236215203 236215226 -14472628 + AT_rich Low_complexity Low_complexity 1 23 0 7440 204 17 18 chr2 236215241 236216008 -14471846 - L1PA16 LINE L1 -1 6165 5399 2169 86 3 64 chr2 236216008 236216322 -14471532 - AluSx SINE Alu -17 295 1 7440 204 17 18 chr2 236216322 236217256 -14470598 - L1PA16 LINE L1 -767 5399 4466 2218 131 0 0 chr2 236217256 236217554 -14470300 - AluSx SINE Alu -12 300 3 7440 204 17 18 chr2 236217554 236218587 -14469267 - L1PA16 LINE L1 -1700 4466 3435 627 220 11 73 chr2 236218918 236219095 -14468759 + MER5A DNA MER1_type 2 167 -22 300 290 104 62 chr2 236219117 236219376 -14468478 + MLT1L LTR MaLR 21 290 -325 244 281 53 0 chr2 236219562 236219676 -14468178 + MLT1L LTR MaLR 496 615 0 464 281 0 22 chr2 236220243 236220378 -14467476 - MER68 LTR ERV1 -4 558 427 723 227 122 9 chr2 236220499 236220728 -14467126 - MER68 LTR ERV1 -303 259 5 1552 185 3 43 chr2 236221062 236221365 -14466489 + AluJo SINE Alu 2 292 -20 260 326 106 41 chr2 236222299 236222517 -14465337 - MIR SINE MIR -20 242 11 2271 84 3 31 chr2 236223090 236223412 -14464442 + AluSp SINE Alu 1 313 0 205 278 72 93 chr2 236223422 236223519 -14464335 - MER5A DNA MER1_type -88 101 7 48 53 0 0 chr2 236224122 236224198 -14463656 + AT_rich Low_complexity Low_complexity 1 76 0 1480 184 39 58 chr2 236224198 236224273 -14463581 + L1MC/D LINE L1 1923 1998 -4542 1990 158 0 0 chr2 236224273 236224570 -14463284 + AluSx SINE Alu 1 297 -15 1480 184 39 58 chr2 236224570 236224907 -14462947 + L1MC/D LINE L1 1998 2327 -4213 2897 139 83 23 chr2 236224907 236225475 -14462379 - MER4B LTR ERV1 0 610 9 201 74 0 0 chr2 236225577 236225604 -14462250 + (TA)n Simple_repeat Simple_repeat 1 27 0 774 170 54 22 chr2 236225604 236225828 -14462026 + L1MC/D LINE L1 2334 2564 -3976 1372 277 31 45 chr2 236225992 236226501 -14461353 + L1PA13 LINE L1 1 502 -6285 * 1428 240 8 8 chr2 236226499 236226858 -14460996 + L1PA13 LINE L1 2855 3213 -3584 225 170 0 0 chr2 236226861 236226914 -14460940 + L1MC/D LINE L1 3455 3507 -3033 2526 275 54 27 chr2 236226916 236228242 -14459612 + L1MC/D LINE L1 3610 4971 -1569 1482 181 37 3 chr2 236228292 236228591 -14459263 + L1MC/D LINE L1 5888 6196 -440 403 127 0 0 chr2 236228591 236228650 -14459204 + L1MD1 LINE L1 6163 6225 -17 2366 260 56 26 chr2 236228682 236229594 -14458260 - L1MEc LINE L1 -5421 975 37 4596 148 79 19 chr2 236229898 236230750 -14457104 - MER4D LTR ERV1 0 903 1 3354 141 61 15 chr2 236230844 236231454 -14456400 - LTR9B LTR ERV1 0 644 7 12096 171 12 1 chr2 236231462 236233510 -14454344 - HUERS-P3 LTR ERV1 -4 8915 6845 * 19879 152 29 16 chr2 236233503 236238456 -14449398 - HUERS-P3 LTR ERV1 -2294 6625 1483 190 261 109 0 chr2 236238456 236238548 -14449306 + MER5C DNA MER1_type 1 102 -222 19879 152 29 16 chr2 236238548 236238793 -14449061 - HUERS-P3 LTR ERV1 -7436 1483 1243 2144 114 31 45 chr2 236238903 236238920 -14448934 + LTR57-int LTR ERVL 894 910 -4433 2101 113 0 3 chr2 236238920 236239231 -14448623 - AluSx SINE Alu 0 310 1 2144 114 31 45 chr2 236239231 236239634 -14448220 + LTR57-int LTR ERVL 910 1309 -4034 * 18784 169 26 30 chr2 236239628 236240855 -14446999 + LTR57-int LTR ERVL 1838 3068 -2275 2216 122 0 3 chr2 236240855 236241166 -14446688 - AluSx SINE Alu -2 310 1 18784 169 26 30 chr2 236241166 236243138 -14444716 + LTR57-int LTR ERVL 3068 5024 -319 2509 124 53 12 chr2 236243138 236243549 -14444305 - MSTA LTR MaLR 0 428 1 18784 169 26 30 chr2 236243549 236243868 -14443986 + LTR57-int LTR ERVL 5024 5343 0 1083 232 11 21 chr2 236243870 236244227 -14443627 + LTR57 LTR ERVL 3 404 -7 574 283 112 22 chr2 236244979 236245202 -14442652 + MIR SINE MIR 9 251 -11 219 308 29 39 chr2 236245288 236245392 -14442462 + L2 LINE L2 297 399 -2915 308 298 42 12 chr2 236246526 236246694 -14441160 - L1ME LINE L1 -373 5748 5576 324 352 41 7 chr2 236246820 236246965 -14440889 - MIR SINE MIR -74 188 39 312 306 24 47 chr2 236247005 236247175 -14440679 - L2 LINE L2 -19 3294 3129 195 372 58 0 chr2 236247236 236247357 -14440497 - L2 LINE L2 -385 2929 2802 550 244 138 22 chr2 236247370 236247595 -14440259 - MER5C DNA MER1_type -4 320 70 203 314 169 0 chr2 236247717 236247835 -14440019 - L2 LINE L2 -605 2709 2572 1764 224 96 24 chr2 236247846 236248421 -14439433 + MLT1E2 LTR MaLR 11 626 0 585 321 98 53 chr2 236248422 236248951 -14438903 - L2 LINE L2 -731 2583 2031 1570 218 55 34 chr2 236248965 236249460 -14438394 - MLT1D LTR MaLR 0 505 1 2250 129 18 34 chr2 236250029 236250410 -14437444 + THE1C LTR MaLR 1 375 0 627 171 39 50 chr2 236250966 236251147 -14436707 - MER53 DNA DNA 0 189 11 381 340 64 10 chr2 236251722 236251925 -14435929 - L2 LINE L2 -352 2962 2749 373 0 36 0 chr2 236251938 236251993 -14435861 + L1MA7 LINE L1 6233 6289 -2 258 32 0 0 chr2 236252823 236252854 -14435000 + (TG)n Simple_repeat Simple_repeat 1 31 0 418 341 46 0 chr2 236254306 236254479 -14433375 - MIR SINE MIR -29 233 53 186 245 19 19 chr2 236255404 236255457 -14432397 + L2 LINE L2 3215 3267 -5 8875 34 0 19 chr2 236255600 236257479 -14430375 - L1PA4 LINE L1 -13 6142 4286 355 345 86 0 chr2 236257851 236258048 -14429806 - MIR SINE MIR -2 260 47 222 264 28 0 chr2 236258731 236258803 -14429051 + MIR SINE MIR 125 198 -64 7044 160 39 33 chr2 236259835 236261278 -14426576 - L1P LINE L1 -4685 1461 11 468 0 0 0 chr2 236261329 236261381 -14426473 + (TG)n Simple_repeat Simple_repeat 1 52 0 317 296 60 19 chr2 236261392 236261659 -14426195 - L1MEd LINE L1 -4921 1198 921 21 0 0 0 chr2 236261675 236261696 -14426158 + AT_rich Low_complexity Low_complexity 1 21 0 3026 171 9 12 chr2 236262758 236263320 -14424534 - L1PA16 LINE L1 0 6166 5607 5224 211 6 16 chr2 236263353 236264625 -14423229 - L1 LINE L1 -1052 5094 3835 2137 92 0 0 chr2 236264625 236264919 -14422935 - THE1B LTR MaLR 0 364 71 965 89 0 0 chr2 236264919 236265054 -14422800 + THE1-int LTR MaLR 1343 1477 -103 469 92 0 0 chr2 236265119 236265184 -14422670 - THE1B LTR MaLR -299 65 1 10533 104 44 9 chr2 236265188 236266710 -14421144 - THE1B-int LTR MaLR -4 1576 2 2054 107 7 0 chr2 236266711 236267000 -14420854 - THE1B LTR MaLR 0 364 74 3930 156 34 44 chr2 236267000 236267992 -14419862 - MER11C LTR ERVK 0 1071 1 461 120 27 0 chr2 236267992 236268067 -14419787 - THE1B LTR MaLR -287 77 1 6685 253 23 14 chr2 236268067 236271153 -14416701 - L1PA13 LINE L1 -2307 5277 2195 352 296 14 46 chr2 236271381 236271573 -14416281 - L1PA13 LINE L1 -5259 2315 2083 602 285 25 30 chr2 236271792 236272027 -14415827 - L1PA13 LINE L1 -6348 1226 993 303 315 167 33 chr2 236272122 236272512 -14415342 - L1 LINE L1 -801 5345 4904 2229 116 0 3 chr2 236272791 236273094 -14414760 - AluSg SINE Alu -8 302 1 357 250 21 107 chr2 236273418 236273558 -14414296 + MIR SINE MIR 10 137 -125 315 274 133 26 chr2 236274682 236274795 -14413059 - MIR SINE MIR -115 147 23 2322 109 3 0 chr2 236275149 236275461 -14412393 + AluSq SINE Alu 1 313 0 381 86 0 0 chr2 236275737 236275795 -14412059 + (CA)n Simple_repeat Simple_repeat 2 59 0 2810 96 3 0 chr2 236276679 236277053 -14410801 + THE1C LTR MaLR 1 375 0 399 267 103 20 chr2 236277192 236277338 -14410516 - MIR SINE MIR -56 206 49 372 349 7 27 chr2 236277401 236277550 -14410304 + MIR SINE MIR 2 147 -115 180 282 0 0 chr2 236277578 236277617 -14410237 + MIR SINE MIR 216 254 -8 218 304 13 38 chr2 236279156 236279314 -14408540 + CT-rich Low_complexity Low_complexity 3 156 0 33 25 0 0 chr2 236280722 236280762 -14407092 + AT_rich Low_complexity Low_complexity 1 40 0 743 181 66 48 chr2 236280853 236281019 -14406835 - FAM SINE Alu -6 169 1 733 169 0 0 chr2 236281031 236281167 -14406687 + L1MB7 LINE L1 6049 6184 0 810 295 170 0 chr2 236281185 236281521 -14406333 + L2 LINE L2 2508 2900 -414 303 243 0 107 chr2 236281619 236281722 -14406132 + L1MC4 LINE L1 6612 6703 -1339 408 275 86 52 chr2 236281806 236281873 -14405981 + HAL1 LINE L1 2105 2168 -339 2293 79 0 3 chr2 236281873 236282164 -14405690 + AluY SINE Alu 15 304 -7 408 275 86 52 chr2 236282164 236282365 -14405489 + HAL1 LINE L1 2168 2382 -125 180 232 58 43 chr2 236282371 236282440 -14405414 + L3 LINE CR1 1315 1384 -193 1225 88 41 10 chr2 236282841 236283035 -14404819 + L1MA1 LINE L1 6099 6298 -4 379 368 6 18 chr2 236283056 236283222 -14404632 - MER5B DNA MER1_type -11 167 4 262 321 30 61 chr2 236283615 236283746 -14404108 + MIR SINE MIR 18 144 -64 448 203 183 7 chr2 236285208 236285361 -14402493 - MER53 DNA DNA -1 188 9 32 57 0 0 chr2 236285863 236285916 -14401938 + AT_rich Low_complexity Low_complexity 1 53 0 737 189 115 49 chr2 236286382 236286625 -14401229 - L1MD3 LINE L1 0 7995 7737 616 190 5 42 chr2 236286642 236286846 -14401008 - MER52A LTR ERV1 -589 1166 829 242 62 0 0 chr2 236286846 236286878 -14400976 - MER52A LTR ERV1 -895 860 829 210 37 0 0 chr2 236286894 236286921 -14400933 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 1591 175 32 11 chr2 236286922 236287202 -14400652 - MLT2B3 LTR ERVL -46 508 223 341 121 0 30 chr2 236287211 236287277 -14400577 + (GGGAGA)n Simple_repeat Simple_repeat 1 64 0 1304 189 4 4 chr2 236287278 236287511 -14400343 - MLT2B3 LTR ERVL -321 233 1 192 317 173 0 chr2 236288666 236288770 -14399084 + L2 LINE L2 3151 3272 0 42292 38 21 2 chr2 236289885 236295922 -14391932 - L1PA2 LINE L1 0 6155 5 605 306 30 42 chr2 236296713 236297046 -14390808 + L1ME LINE L1 19 347 -5723 464 287 35 17 chr2 236297046 236297220 -14390634 - L1MEc LINE L1 -5909 487 311 503 263 0 22 chr2 236297228 236297365 -14390489 - L1MEc LINE L1 -6129 267 134 1749 282 99 8 chr2 236297371 236297466 -14390388 - L1MCc LINE L1 -4891 1532 1447 189 74 0 0 chr2 236297466 236297493 -14390361 + (TG)n Simple_repeat Simple_repeat 2 28 0 1749 282 99 8 chr2 236297493 236298281 -14389573 - L1MCc LINE L1 -4976 1447 806 707 254 30 48 chr2 236298454 236298511 -14389343 - L1MCc LINE L1 -6143 280 223 2556 107 6 8 chr2 236298511 236298876 -14388978 + THE1B LTR MaLR 1 364 0 707 254 30 48 chr2 236298876 236299086 -14388768 - L1MCc LINE L1 -6200 223 18 1061 278 100 20 chr2 236299106 236299757 -14388097 - L1M4 LINE L1 -1721 4425 3723 271 94 19 19 chr2 236299971 236300024 -14387830 + (TC)n Simple_repeat Simple_repeat 1 53 0 1384 258 62 48 chr2 236300032 236300843 -14387011 - L1M4 LINE L1 -2873 3273 2452 1304 296 124 22 chr2 236300857 236301107 -14386747 - L2 LINE L2 -1363 1951 1728 266 50 25 0 chr2 236301107 236301147 -14386707 + (TG)n Simple_repeat Simple_repeat 2 42 0 1304 296 124 22 chr2 236301147 236301581 -14386273 - L2 LINE L2 -1586 1728 1197 2339 165 110 59 chr2 236304113 236304640 -14383214 + MLT2B3 LTR ERVL 1 554 0 603 183 15 89 chr2 236305357 236305559 -14382295 + MER53 DNA DNA 2 188 -1 283 301 55 14 chr2 236306006 236306152 -14381702 - L1MC4a LINE L1 -1919 5823 5672 1835 175 3 3 chr2 236306209 236306512 -14381342 + AluJb SINE Alu 1 303 -9 456 259 66 78 chr2 236306978 236307263 -14380591 - L1MC4a LINE L1 -606 5482 5221 2198 54 41 10 chr2 236307343 236307637 -14380217 + MLT2A1 LTR ERVL 5 307 -137 314 269 15 39 chr2 236307669 236307799 -14380055 - L1MC4a LINE L1 -2268 3812 3686 1860 179 28 33 chr2 236307804 236308196 -14379658 - MLT1B LTR MaLR 0 390 1 587 140 18 0 chr2 236308243 236308357 -14379497 + CT-rich Low_complexity Low_complexity 1 116 0 3330 267 28 31 chr2 236308357 236309724 -14378130 - L1MC4a LINE L1 -2454 3626 2265 348 325 70 49 chr2 236309743 236309986 -14377868 - L1MC/D LINE L1 -2255 5553 5306 229 59 0 0 chr2 236310021 236310055 -14377799 - L1MA3 LINE L1 0 6305 6272 7320 41 4 0 chr2 236310427 236311863 -14375991 - L1PA5 LINE L1 -5 6149 4708 212 328 78 0 chr2 236314748 236314812 -14373042 + MIR SINE MIR 33 101 -107 476 174 46 108 chr2 236315057 236315252 -14372602 - LTR33A LTR ERVL 0 523 341 262 310 35 0 chr2 236315362 236315449 -14372405 - LTR33 LTR ERVL -343 178 89 218 189 0 19 chr2 236315815 236315868 -14371986 + (TA)n Simple_repeat Simple_repeat 1 52 0 195 394 0 39 chr2 236315994 236316098 -14371756 + MER5A DNA MER1_type 60 159 -30 225 250 0 76 chr2 236316098 236316190 -14371664 - LTR33A LTR ERVL -6 517 433 1358 216 59 22 chr2 236316234 236316605 -14371249 + MLT1B LTR MaLR 1 385 -5 209 347 13 0 chr2 236317667 236317742 -14370112 + MIR3 SINE MIR 110 185 -23 548 214 22 18 chr2 236317841 236318007 -14369847 - L1ME3A LINE L1 -8 6156 5984 316 287 49 18 chr2 236318006 236318170 -14369684 + L1M4 LINE L1 2327 2495 -3651 * 374 351 20 50 chr2 236318168 236318470 -14369384 - L1MC4a LINE L1 -5772 298 6 995 285 45 30 chr2 236318473 236319147 -14368707 - L1M4 LINE L1 -1669 4477 3794 291 299 40 36 chr2 236319302 236319390 -14368464 - L1M4c LINE L1 -4839 1724 1638 225 65 0 0 chr2 236319390 236319421 -14368433 + (TG)n Simple_repeat Simple_repeat 2 32 0 291 299 40 36 chr2 236319421 236319610 -14368244 - L1M4c LINE L1 -4925 1638 1297 1949 179 2 72 chr2 236319760 236320174 -14367680 + MLT1B LTR MaLR 1 385 -5 1589 149 80 44 chr2 236320458 236320820 -14367034 + THE1C LTR MaLR 1 375 0 653 266 16 27 chr2 236321631 236321819 -14366035 - MIR SINE MIR -74 188 3 311 294 12 0 chr2 236321849 236321934 -14365920 + L1MC4 LINE L1 6615 6700 -1342 377 64 51 0 chr2 236322452 236322530 -14365324 + (TA)n Simple_repeat Simple_repeat 2 83 0 1504 169 12 0 chr2 236322570 236322818 -14365036 - AluJb SINE Alu -61 251 1 840 260 36 0 chr2 236323452 236323733 -14364121 - L1M4 LINE L1 -2277 3869 3579 3866 138 32 11 chr2 236323741 236324398 -14363456 - L1PA16 LINE L1 -4 6162 5492 592 192 42 8 chr2 236324606 236324726 -14363128 - FLAM_C SINE Alu -19 124 1 5346 128 31 2 chr2 236324864 236326219 -14361635 - L1PA15 LINE L1 0 6816 5413 11608 226 66 15 chr2 236326220 236331005 -14356849 - L1PA15 LINE L1 -1759 5038 1 2363 101 0 0 chr2 236331390 236331697 -14356157 - AluSg SINE Alu -3 307 1 191 122 0 24 chr2 236331865 236331906 -14355948 + (TTTTTA)n Simple_repeat Simple_repeat 2 41 0 436 244 64 68 chr2 236332501 236332767 -14355087 + HAL1 LINE L1 2243 2507 0 1052 146 84 0 chr2 236332786 236332964 -14354890 + AluSx SINE Alu 1 193 -119 3663 88 8 21 chr2 236332965 236333479 -14354375 - HERVL LTR ERVL -408 5246 4740 1989 182 17 20 chr2 236334303 236334320 -14353534 - MLT2D LTR ERVL -13 502 486 333 0 0 0 chr2 236334320 236334357 -14353497 + (TG)n Simple_repeat Simple_repeat 1 37 0 1989 182 17 20 chr2 236334357 236334747 -14353107 - MLT2D LTR ERVL -29 486 1 2025 172 24 12 chr2 236335717 236336142 -14351712 - L1MA9 LINE L1 -5 6307 5878 246 62 0 0 chr2 236336233 236336265 -14351589 + (TG)n Simple_repeat Simple_repeat 1 32 0 216 0 0 0 chr2 236336264 236336288 -14351566 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 2392 88 0 25 chr2 236338080 236338399 -14349455 - AluY SINE Alu 0 311 1 256 301 184 0 chr2 236338415 236338518 -14349336 + L2 LINE L2 3192 3313 0 510 197 96 115 chr2 236338646 236338907 -14348947 + MLT1E2 LTR MaLR 4 234 -392 4268 149 29 10 chr2 236338965 236339662 -14348192 - MER50 LTR ERV1 -24 710 1 1051 224 15 45 chr2 236339662 236339926 -14347928 + MLT1E2 LTR MaLR 267 522 -104 977 303 107 74 chr2 236340267 236341158 -14346696 + L2 LINE L2 2261 3198 -115 3089 202 29 13 chr2 236341158 236341852 -14346002 + MER67C LTR ERV1 3 707 -3 977 303 107 74 chr2 236341852 236341955 -14345899 + L2 LINE L2 3198 3296 -17 1773 124 18 18 chr2 236342377 236342651 -14345203 + AluSx SINE Alu 32 305 -7 2865 174 12 69 chr2 236342824 236342941 -14344913 - LTR9 LTR ERV1 0 612 490 1849 121 3 91 chr2 236342941 236343280 -14344574 + AluSg SINE Alu 1 309 -1 2865 174 12 69 chr2 236343280 236343811 -14344043 - LTR9 LTR ERV1 -122 490 1 461 283 53 53 chr2 236344711 236344958 -14342896 + MIR SINE MIR 7 253 -9 363 267 121 46 chr2 236345294 236345601 -14342253 - HAL1 LINE L1 -924 1583 1254 365 293 20 7 chr2 236345614 236345764 -14342090 - L1ME LINE L1 -430 5691 5540 384 274 8 40 chr2 236346853 236346977 -14340877 + LTR33 LTR ERVL 395 514 -7 24 32 0 0 chr2 236347136 236347167 -14340687 + AT_rich Low_complexity Low_complexity 1 31 0 1144 126 0 6 chr2 236348054 236348213 -14339641 - AluSp SINE Alu -22 291 134 2289 105 0 0 chr2 236348213 236348508 -14339346 - AluY SINE Alu -16 295 1 22 35 0 0 chr2 236348562 236348591 -14339263 + AT_rich Low_complexity Low_complexity 1 29 0 424 207 17 49 chr2 236348963 236349276 -14338578 + (CACCAT)n Simple_repeat Simple_repeat 1 303 0 24 0 0 0 chr2 236349840 236349864 -14337990 + AT_rich Low_complexity Low_complexity 1 24 0 839 92 0 28 chr2 236350121 236350262 -14337592 + (TA)n Simple_repeat Simple_repeat 2 138 0 935 176 0 0 chr2 236350264 236350412 -14337442 - AluJb SINE Alu -34 278 131 258 213 27 0 chr2 236350415 236350490 -14337364 - L1MC4 LINE L1 -1351 6691 6615 778 157 0 8 chr2 236350490 236350611 -14337243 - FLAM_C SINE Alu -13 120 1 457 186 70 0 chr2 236350877 236350963 -14336891 + Charlie1 DNA MER1_type 1 92 -2669 1866 241 40 43 chr2 236350989 236351060 -14336794 + Charlie1 DNA MER1_type 1491 1561 -1200 10785 33 0 4 chr2 236351060 236353156 -14334698 - L1PA3 LINE L1 0 6155 4091 1866 241 40 43 chr2 236353156 236353735 -14334119 + Charlie1 DNA MER1_type 1561 2139 -622 192 40 0 0 chr2 236353818 236353843 -14334011 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 988 253 110 31 chr2 236353843 236354234 -14333620 - MER68 LTR ERV1 -140 422 1 2326 80 3 7 chr2 236354247 236354548 -14333306 + AluY SINE Alu 1 300 -11 2287 201 26 36 chr2 236354563 236355176 -14332678 + Charlie1 DNA MER1_type 2155 2761 0 390 310 38 29 chr2 236355504 236355759 -14332095 + L1MC/D LINE L1 5559 5829 -341 219 258 0 22 chr2 236355951 236356040 -14331814 + T-rich Low_complexity Low_complexity 6 92 0 310 339 17 17 chr2 236356190 236356305 -14331549 - MIR3 SINE MIR -90 118 4 713 298 71 0 chr2 236356376 236356614 -14331240 - MIR SINE MIR -3 259 5 1773 49 0 0 chr2 236356744 236356967 -14330887 - L1PA4 LINE L1 0 6155 5933 364 43 0 0 chr2 236356967 236357013 -14330841 + L1P2 LINE L1 5775 5820 -334 412 84 59 8 chr2 236357086 236357205 -14330649 + (TA)n Simple_repeat Simple_repeat 1 125 0 305 271 79 79 chr2 236357215 236357418 -14330436 - L1MC/D LINE L1 -1991 5817 5615 209 219 0 0 chr2 236358567 236358608 -14329246 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 396 284 102 49 chr2 236358712 236358949 -14328905 - MIR SINE MIR -10 252 15 182 340 113 21 chr2 236358980 236359174 -14328680 - MIR SINE MIR -1 261 50 629 250 62 42 chr2 236360841 236361129 -14326725 + L1M4 LINE L1 2985 3278 -2868 468 0 0 0 chr2 236361611 236361663 -14326191 + (CA)n Simple_repeat Simple_repeat 1 52 0 470 150 279 14 chr2 236362268 236362415 -14325439 + L1MA7 LINE L1 6106 6291 0 1951 133 0 33 chr2 236362803 236363104 -14324750 + AluSx SINE Alu 1 291 -21 318 330 63 34 chr2 236363445 236363603 -14324251 - MIR SINE MIR -1 261 94 956 213 10 5 chr2 236363603 236363810 -14324044 - MER6B DNA MER2_type -1 209 2 318 330 63 34 chr2 236363810 236363857 -14323997 - MIR SINE MIR -168 94 50 468 0 0 0 chr2 236364390 236364442 -14323412 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 1176 302 85 35 chr2 236364738 236365795 -14322059 + L1MCc LINE L1 1269 2609 -4513 1922 113 8 4 chr2 236365795 236366210 -14321644 + AluSq SINE Alu 18 433 0 1176 302 85 35 chr2 236366210 236366384 -14321470 + L1MCc LINE L1 2609 2773 -4349 26 30 0 0 chr2 236366384 236366417 -14321437 + AT_rich Low_complexity Low_complexity 1 33 0 1279 259 80 55 chr2 236366891 236367108 -14320746 + L1MCc LINE L1 2769 2979 -3962 1974 245 55 36 chr2 236367108 236367687 -14320167 + MLT1E LTR MaLR 2 591 -2 1279 259 80 55 chr2 236367687 236367752 -14320102 + L1MCc LINE L1 2979 3041 -3900 2666 34 0 0 chr2 236367752 236368074 -14319780 + L1PA4 LINE L1 5832 6153 -2 1279 259 80 55 chr2 236368074 236368731 -14319123 + L1MCc LINE L1 3041 3692 -3249 2172 182 77 0 chr2 236368735 236369203 -14318651 + L1MB7 LINE L1 5674 6177 -7 828 249 106 10 chr2 236369210 236369699 -14318155 + L1MCc LINE L1 3701 4236 -2705 484 266 16 82 chr2 236369837 236370081 -14317773 - L1MEd LINE L1 -4584 1812 1585 276 30 0 0 chr2 236370100 236370133 -14317721 + (TG)n Simple_repeat Simple_repeat 2 34 0 404 277 25 8 chr2 236370235 236370354 -14317500 - L2 LINE L2 -5 3308 3188 358 326 70 79 chr2 236370883 236371410 -14316444 - L1MEd LINE L1 -934 1642 1035 711 151 8 0 chr2 236371410 236371529 -14316325 + L1PB4 LINE L1 6031 6150 -6 358 326 70 79 chr2 236371529 236371578 -14316276 - L1MEd LINE L1 -1541 1035 987 318 26 0 0 chr2 236371599 236371638 -14316216 + (T)n Simple_repeat Simple_repeat 1 39 0 188 185 19 0 chr2 236371698 236371752 -14316102 + (TTGG)n Simple_repeat Simple_repeat 2 56 0 2264 121 0 0 chr2 236373999 236374306 -14313548 - AluSx SINE Alu -5 307 1 983 348 104 39 chr2 236374344 236374659 -14313195 - L2 LINE L2 0 3272 2979 186 43 0 0 chr2 236374659 236374682 -14313172 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 983 348 104 39 chr2 236374682 236375371 -14312483 - L2 LINE L2 -293 2979 2145 2024 112 3 60 chr2 236375371 236375702 -14312152 + AluSx SINE Alu 1 312 0 983 348 104 39 chr2 236375702 236376165 -14311689 - L2 LINE L2 -1127 2145 1714 3957 92 24 4 chr2 236377009 236377562 -14310292 - LTR6A LTR ERV1 0 564 1 742 264 6 28 chr2 236378079 236378261 -14309593 - MER45A DNA AcHobo 0 178 1 223 244 89 56 chr2 236378286 236378376 -14309478 + MIR SINE MIR 48 140 -68 194 280 20 0 chr2 236378385 236378435 -14309419 - L2 LINE L2 -13 3300 3250 270 0 0 0 chr2 236378450 236378480 -14309374 + (CA)n Simple_repeat Simple_repeat 1 30 0 399 335 54 20 chr2 236378736 236378939 -14308915 - MIR SINE MIR -21 241 32 213 203 51 0 chr2 236379248 236379307 -14308547 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 24 53 0 0 chr2 236379523 236379561 -14308293 + AT_rich Low_complexity Low_complexity 1 38 0 6936 257 77 23 chr2 236380227 236382264 -14305590 + MER90-int LTR ERV1 1988 4135 -56 545 281 11 34 chr2 236382504 236382682 -14305172 - MER77 LTR ERV1 -9 596 423 1532 191 7 33 chr2 236382739 236383043 -14304811 + AluJo SINE Alu 1 296 -16 564 251 23 36 chr2 236383381 236383564 -14304290 + MER77 LTR ERV1 407 596 -9 366 42 0 0 chr2 236385386 236385434 -14302420 + (TG)n Simple_repeat Simple_repeat 1 48 0 745 162 7 29 chr2 236385504 236385640 -14302214 + AluJb SINE Alu 1 133 -179 2787 120 34 2 chr2 236386517 236386926 -14300928 - MSTA LTR MaLR 0 428 7 1912 227 38 84 chr2 236387109 236387748 -14300106 + MER90 LTR ERV1 1 609 -5 214 255 0 0 chr2 236387866 236387913 -14299941 + L2 LINE L2 3225 3271 -1 210 91 0 0 chr2 236388245 236388278 -14299576 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 901 127 0 0 chr2 236388279 236388397 -14299457 - AluSq/x SINE Alu -195 118 1 2097 166 2 47 chr2 236390792 236391219 -14296635 + L1M2 LINE L1 5270 5677 -614 707 254 102 53 chr2 236391365 236391913 -14295941 + L1ME LINE L1 939 1513 -5017 288 264 35 49 chr2 236392029 236392173 -14295681 + L1ME LINE L1 1726 1867 -4673 461 311 100 30 chr2 236392188 236392458 -14295396 - LTR16B LTR ERVL -110 354 66 2349 83 3 0 chr2 236392650 236392940 -14294914 + AluY SINE Alu 1 291 -20 452 266 53 30 chr2 236392966 236393135 -14294719 - MLT1H LTR MaLR -23 526 354 189 341 62 16 chr2 236393520 236393649 -14294205 - L3 LINE CR1 -826 751 617 5188 150 20 6 chr2 236393656 236394622 -14293232 + L1PB4 LINE L1 5172 6149 -7 53 49 0 0 chr2 236395616 236395697 -14292157 + AT_rich Low_complexity Low_complexity 1 81 0 273 265 96 0 chr2 236395999 236396082 -14291772 - MIR SINE MIR -43 219 129 21 0 0 0 chr2 236397394 236397415 -14290439 + AT_rich Low_complexity Low_complexity 1 21 0 586 273 200 17 chr2 236397567 236397912 -14289942 - L2 LINE L2 -1 3312 2905 1292 251 61 44 chr2 236399574 236399904 -14287950 + MLT1D LTR MaLR 1 343 -162 3543 113 9 15 chr2 236399904 236400434 -14287420 + MER1A DNA MER1_type 1 527 0 1292 251 61 44 chr2 236400434 236400598 -14287256 + MLT1D LTR MaLR 343 503 -2 2198 123 0 0 chr2 236400650 236400951 -14286903 + AluSq SINE Alu 1 301 -12 460 306 61 11 chr2 236401079 236401259 -14286595 - MIR SINE MIR -6 256 68 621 113 21 10 chr2 236401310 236401407 -14286447 + MER4A LTR ERV1 1 98 -566 1788 146 6 27 chr2 236401407 236401760 -14286094 + MER4A LTR ERV1 261 664 0 2540 161 42 18 chr2 236401763 236402312 -14285542 + MER4A-int LTR ERV1 1 686 -5912 1175 249 61 3 chr2 236402460 236402753 -14285101 + MER4A-int LTR ERV1 1852 2161 -4170 5742 130 79 5 chr2 236402823 236403356 -14284498 + MER4B-int LTR ERV1 199 691 -6067 333 0 0 0 chr2 236403356 236403393 -14284461 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 5742 130 79 5 chr2 236403393 236403799 -14284055 + MER4B-int LTR ERV1 691 1189 -5569 2999 99 103 8 chr2 236403829 236403871 -14283983 + MER4B-int LTR ERV1 1912 1949 -4649 2054 155 0 3 chr2 236403871 236404181 -14283673 + AluSx SINE Alu 1 309 -3 2999 99 103 8 chr2 236404181 236404671 -14283183 + MER4B-int LTR ERV1 1949 2495 -4103 1183 133 156 13 chr2 236404671 236404896 -14282958 - LTR8 LTR ERV1 -434 257 1 1785 95 16 13 chr2 236404896 236405213 -14282641 + MER4B-int LTR ERV1 2737 3054 -3544 666 200 0 8 chr2 236405220 236405340 -14282514 + THE1B LTR MaLR 246 364 0 811 160 32 13 chr2 236405340 236405535 -14282319 + MER4A-int LTR ERV1 2038 4329 -551 15688 114 46 17 chr2 236405537 236408176 -14279678 + MER4A-int LTR ERV1 3881 6596 -2 581 115 31 10 chr2 236408184 236408280 -14279574 + MER4A LTR ERV1 1 98 -566 1732 128 14 75 chr2 236408280 236408648 -14279206 + MER4A LTR ERV1 261 664 0 377 313 102 25 chr2 236409013 236409288 -14278566 + L1M4 LINE L1 4589 4884 -1262 196 318 143 60 chr2 236409346 236409455 -14278399 + L2 LINE L2 2874 2972 -341 1710 168 30 10 chr2 236409455 236409753 -14278101 - AluJb SINE Alu -8 304 1 196 318 143 60 chr2 236409753 236409895 -14277959 + L2 LINE L2 2972 3146 -167 193 280 0 0 chr2 236409922 236409972 -14277882 + L2 LINE L2 3263 3312 -1 490 315 99 69 chr2 236410395 236411285 -14276569 - L2 LINE L2 0 3313 2383 450 279 134 25 chr2 236411630 236411831 -14276023 - MIR SINE MIR -12 250 28 346 374 41 0 chr2 236412082 236412253 -14275601 + L2 LINE L2 1328 1505 -1809 330 194 56 9 chr2 236412320 236412428 -14275426 + (TG)n Simple_repeat Simple_repeat 1 113 0 445 333 100 0 chr2 236412448 236412658 -14275196 - L2 LINE L2 -2032 1282 1052 559 256 174 37 chr2 236412720 236413071 -14274783 + L2 LINE L2 2834 3232 -81 1015 272 162 9 chr2 236413150 236413675 -14274179 - L2 LINE L2 -2244 1070 466 21 36 0 0 chr2 236413901 236413929 -14273925 + AT_rich Low_complexity Low_complexity 1 28 0 267 169 17 0 chr2 236413929 236413988 -14273866 + L1ME4a LINE L1 6056 6115 -6 26 74 0 0 chr2 236414600 236414654 -14273200 + AT_rich Low_complexity Low_complexity 1 54 0 660 208 60 0 chr2 236415282 236415431 -14272423 - L1MA10 LINE L1 -3 6331 6174 1709 176 27 0 chr2 236416357 236416653 -14271201 - MLT1A1 LTR MaLR -61 304 1 250 259 49 0 chr2 236416746 236416827 -14271027 + MER67D LTR ERV1 1 85 -429 1371 209 51 42 chr2 236416869 236417073 -14270781 + MER67C LTR ERV1 72 282 -428 2182 180 39 10 chr2 236417073 236417489 -14270365 + MSTA LTR MaLR 1 428 0 1371 209 51 42 chr2 236417489 236417619 -14270235 + MER67C LTR ERV1 282 409 -301 3476 103 41 84 chr2 236419188 236419817 -14268037 - LTR43 LTR ERV1 0 602 1 180 0 0 0 chr2 236420058 236420078 -14267776 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1650 199 68 8 chr2 236420272 236420623 -14267231 + MSTA LTR MaLR 1 372 -56 2058 107 55 0 chr2 236420628 236421068 -14266786 - AluSc SINE Alu 0 456 1 450 69 0 0 chr2 236421076 236421134 -14266720 + MSTA LTR MaLR 371 428 0 * 1586 214 53 59 chr2 236421134 236421603 -14266251 + MLT1D LTR MaLR 40 505 0 216 0 0 0 chr2 236421617 236421641 -14266213 + (TG)n Simple_repeat Simple_repeat 1 24 0 244 192 0 0 chr2 236421840 236421892 -14265962 - Alu SINE Alu 0 302 251 971 128 0 34 chr2 236421892 236422040 -14265814 - AluJo SINE Alu -164 148 6 538 314 38 11 chr2 236422774 236422959 -14264895 - LTR33A LTR ERVL -330 193 4 1299 205 38 126 chr2 236423823 236423954 -14263900 + MLT1E2 LTR MaLR 1 142 -512 2246 110 0 25 chr2 236423954 236424273 -14263581 + AluSq SINE Alu 3 313 0 1299 205 38 126 chr2 236424273 236424648 -14263206 + MLT1E2 LTR MaLR 142 492 -162 2307 101 3 0 chr2 236425741 236426049 -14261805 + AluSp SINE Alu 1 309 -4 816 267 49 32 chr2 236426685 236426970 -14260884 + MER110 LTR ERV1 166 455 -36 302 311 0 0 chr2 236427072 236427175 -14260679 + L2 LINE L2 2517 2619 -695 1522 167 0 43 chr2 236427231 236427513 -14260341 - AluJo SINE Alu -15 297 28 426 314 117 31 chr2 236427741 236428194 -14259660 - HAL1 LINE L1 -593 1914 1423 1227 175 52 10 chr2 236428557 236428859 -14258995 - MER33 DNA MER1_type -5 319 1 295 138 169 0 chr2 236429377 236429442 -14258412 + MER5A DNA MER1_type 1 76 -113 2333 102 0 6 chr2 236429442 236429757 -14258097 + AluSp SINE Alu 1 313 0 327 252 101 50 chr2 236429801 236429920 -14257934 + MER5A DNA MER1_type 63 187 -2 2031 125 58 19 chr2 236431701 236432061 -14255793 - THE1C LTR MaLR -1 374 1 424 283 142 34 chr2 236432460 236432665 -14255189 - MIR SINE MIR -17 245 19 24 53 0 0 chr2 236433610 236433648 -14254206 + AT_rich Low_complexity Low_complexity 1 38 0 451 321 32 43 chr2 236433906 236434093 -14253761 - MIR SINE MIR -46 216 32 288 235 29 0 chr2 236434365 236434433 -14253421 + CT-rich Low_complexity Low_complexity 3 72 0 670 336 110 55 chr2 236434460 236435832 -14252022 - L2 LINE L2 -32 3281 1836 2217 218 9 0 chr2 236435842 236436309 -14251545 + L1MB8 LINE L1 5374 5844 -334 525 143 38 38 chr2 236436530 236436663 -14251191 - AluSq/x SINE Alu -179 133 1 476 134 0 126 chr2 236436665 236436728 -14251126 + L1MD2 LINE L1 6228 6269 -90 1687 178 33 18 chr2 236436728 236437060 -14250794 - MER1B DNA MER1_type 0 337 1 476 134 0 126 chr2 236437060 236437123 -14250731 + L1MD2 LINE L1 6269 6338 -21 834 207 141 15 chr2 236437151 236437537 -14250317 - L1MC/D LINE L1 -763 5383 5053 666 275 25 0 chr2 236437537 236437737 -14250117 + L1ME2 LINE L1 5486 5690 -476 2512 135 32 28 chr2 236437742 236438178 -14249676 + MER65A LTR ERV1 6 443 -2 1489 200 63 48 chr2 236438185 236438658 -14249196 + L1ME2 LINE L1 5695 6332 -2 253 300 74 74 chr2 236438691 236439083 -14248771 + L1MCc LINE L1 485 909 -5514 22 35 0 0 chr2 236439537 236439566 -14248288 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 236439642 236439664 -14248190 + AT_rich Low_complexity Low_complexity 1 22 0 188 304 61 70 chr2 236439673 236439788 -14248066 + L3b LINE CR1 1411 1524 -59 476 250 145 0 chr2 236440349 236440521 -14247333 - MIR SINE MIR 0 262 66 184 208 21 21 chr2 236441127 236441175 -14246679 + L2 LINE L2 3261 3308 -5 1561 242 111 2 chr2 236441192 236441616 -14246238 + MLT2B1 LTR ERVL 3 484 -36 429 36 0 0 chr2 236441616 236441671 -14246183 + (CA)n Simple_repeat Simple_repeat 2 56 0 1561 242 111 2 chr2 236441671 236441713 -14246141 + MLT2B1 LTR ERVL 484 520 0 1039 349 45 19 chr2 236441764 236442346 -14245508 + L3 LINE CR1 419 1015 -562 459 244 22 22 chr2 236442356 236442491 -14245363 + MER5A DNA MER1_type 32 166 -23 318 95 0 0 chr2 236443996 236444038 -14243816 + 5S rRNA rRNA 1 42 -79 2171 114 0 26 chr2 236444125 236444432 -14243422 - AluSx SINE Alu -13 299 1 791 216 134 0 chr2 236444871 236445065 -14242789 - MER58A DNA MER1_type -1 223 4 820 129 53 0 chr2 236445208 236445340 -14242514 - L1MC2 LINE L1 -193 6151 6013 570 218 22 22 chr2 236445347 236445530 -14242324 - L1PA15-16 LINE L1 -3827 3022 2837 608 126 16 118 chr2 236445572 236445617 -14242237 - MSTA LTR MaLR -2 426 378 2379 77 3 0 chr2 236445617 236445916 -14241938 + AluY SINE Alu 1 300 -11 608 126 16 118 chr2 236445916 236445997 -14241857 - MSTA LTR MaLR -50 378 313 509 237 106 34 chr2 236446274 236446510 -14241344 + MER5C DNA MER1_type 1 253 -71 2392 82 0 13 chr2 236446539 236446854 -14241000 - AluY SINE Alu 0 311 1 647 291 30 7 chr2 236447368 236447663 -14240191 + L1 LINE L1 3120 3421 -2725 1049 121 69 0 chr2 236447663 236447836 -14240018 - MSTA LTR MaLR -243 185 1 925 171 7 0 chr2 236447836 236447982 -14239872 + MLT1C LTR MaLR 321 467 0 1179 348 89 17 chr2 236448012 236449354 -14238500 - ERVL LTR ERVL -941 4823 3349 182 360 166 23 chr2 236449493 236449668 -14238186 + L2 LINE L2 2653 2852 -462 261 345 0 0 chr2 236449692 236449779 -14238075 - MIR SINE MIR -3 259 173 779 228 55 6 chr2 236449790 236450090 -14237764 + MLT2D LTR ERVL 1 414 0 312 319 146 21 chr2 236450090 236450234 -14237620 - MIR SINE MIR -99 163 2 24 53 0 0 chr2 236450759 236450797 -14237057 + AT_rich Low_complexity Low_complexity 1 38 0 874 235 26 22 chr2 236451284 236451514 -14236340 + MLT1H LTR MaLR 3 233 -316 1800 151 18 0 chr2 236451813 236452092 -14235762 + AluSq SINE Alu 12 295 -18 258 253 53 13 chr2 236452928 236453003 -14234851 + MLT1J LTR MaLR 238 315 -196 242 275 37 37 chr2 236453042 236453151 -14234703 + MLT1L LTR MaLR 507 615 0 23 0 0 0 chr2 236453378 236453401 -14234453 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 236453560 236453584 -14234270 + AT_rich Low_complexity Low_complexity 1 24 0 39 0 0 0 chr2 236453958 236453997 -14233857 + AT_rich Low_complexity Low_complexity 1 39 0 1343 38 0 0 chr2 236453997 236454157 -14233697 - L1PA3 LINE L1 -3 6152 5993 11515 26 84 15 chr2 236454162 236455649 -14232205 + L1P LINE L1 3644 5233 -913 462 301 29 0 chr2 236456244 236456380 -14231474 + L1MEd LINE L1 600 739 -5466 651 288 86 65 chr2 236456832 236457498 -14230356 + L1MEd LINE L1 1075 1754 -4642 837 283 108 36 chr2 236457640 236458440 -14229414 + L1MEd LINE L1 2204 3060 -3155 365 299 79 11 chr2 236459079 236459256 -14228598 + MIR SINE MIR 63 251 -11 1921 58 17 0 chr2 236459583 236459866 -14227988 + AluY SINE Alu 39 325 0 465 240 48 0 chr2 236460550 236460675 -14227179 + MER94 DNA DNA 1 131 -3 528 311 24 30 chr2 236460797 236460964 -14226890 + MIR SINE MIR 28 193 -69 278 244 93 0 chr2 236460995 236461081 -14226773 - MLT1I LTR MaLR -27 382 289 1107 141 0 80 chr2 236461949 236462015 -14225839 + MER4D LTR ERV1 3 73 -830 2494 49 10 3 chr2 236462015 236462323 -14225531 - AluY SINE Alu -1 310 1 1107 141 0 80 chr2 236462323 236462469 -14225385 + MER4D LTR ERV1 73 198 -705 435 294 9 0 chr2 236463108 236463217 -14224637 + MER97c DNA MER1_type? 1 110 -980 1283 178 4 12 chr2 236463747 236463988 -14223866 + MER96B DNA MER1_type? 1 239 -178 622 332 17 59 chr2 236464044 236464113 -14223741 - L2 LINE L2 -253 3060 2990 2069 96 3 77 chr2 236464113 236464426 -14223428 + AluSx SINE Alu 2 291 -21 622 332 17 59 chr2 236464426 236464797 -14223057 - L2 LINE L2 -323 2990 2637 397 222 0 22 chr2 236464961 236465051 -14222803 + MER21B LTR ERV1 3 90 -773 2908 239 55 17 chr2 236465073 236465838 -14222016 + MER21B LTR ERV1 19 812 -51 204 291 35 35 chr2 236465868 236465954 -14221900 - L2 LINE L2 -2033 1281 1196 1370 202 3 63 chr2 236466139 236466510 -14221344 + MLT2D LTR ERVL 1 332 -82 1192 243 89 68 chr2 236466632 236467072 -14220782 + MLT2B3 LTR ERVL 106 554 0 720 0 31 10 chr2 236467104 236467200 -14220654 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 199 218 77 64 chr2 236467542 236467620 -14220234 - MIR SINE MIR -71 191 113 1082 201 129 0 chr2 236468762 236469026 -14218828 + L1MD2 LINE L1 5937 6126 -116 1873 149 23 16 chr2 236469039 236469347 -14218507 - AluSx SINE Alu 0 312 3 23 0 0 0 chr2 236469992 236470015 -14217839 + AT_rich Low_complexity Low_complexity 1 23 0 2108 93 0 0 chr2 236470365 236470635 -14217219 + AluY SINE Alu 39 308 -3 214 357 56 8 chr2 236470901 236471027 -14216827 - MIR SINE MIR -55 207 76 328 345 51 20 chr2 236471359 236471614 -14216240 - MARNA DNA Mariner -191 395 133 245 278 31 26 chr2 236471741 236471877 -14215977 + L1ME LINE L1 5641 5779 -372 29 47 0 0 chr2 236471925 236471968 -14215886 + AT_rich Low_complexity Low_complexity 1 43 0 302 247 49 0 chr2 236472752 236472833 -14215021 - MIR SINE MIR -41 221 137 1989 128 6 41 chr2 236473054 236473374 -14214480 + AluSc SINE Alu 1 309 0 21 36 0 0 chr2 236473530 236473558 -14214296 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 236473730 236473752 -14214102 + (CA)n Simple_repeat Simple_repeat 2 23 0 195 42 0 0 chr2 236473752 236473776 -14214078 + (GA)n Simple_repeat Simple_repeat 1 24 0 2045 128 3 13 chr2 236474704 236475009 -14212845 + AluSx SINE Alu 5 306 -6 42379 37 22 2 chr2 236475715 236481741 -14206113 + L1PA2 LINE L1 1 6152 -3 180 278 78 52 chr2 236482217 236482332 -14205522 + L3b LINE CR1 1287 1404 -179 23 0 0 0 chr2 236482971 236482994 -14204860 + AT_rich Low_complexity Low_complexity 1 23 0 31 0 0 0 chr2 236483136 236483167 -14204687 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 236483220 236483249 -14204605 + AT_rich Low_complexity Low_complexity 1 29 0 2273 52 52 0 chr2 236484954 236485241 -14202613 + AluY SINE Alu 1 302 -9 234 0 0 0 chr2 236485737 236485763 -14202091 + (TG)n Simple_repeat Simple_repeat 2 27 0 2363 103 0 0 chr2 236486032 236486332 -14201522 - AluSx SINE Alu -12 300 1 1070 192 16 90 chr2 236486489 236486812 -14201042 - L1MA9 LINE L1 -5 6307 6009 435 285 50 41 chr2 236487038 236487259 -14200595 - HAL1 LINE L1 -1215 1292 1070 357 251 43 49 chr2 236487289 236487452 -14200402 - L2 LINE L2 0 3313 3152 314 211 30 128 chr2 236487659 236487792 -14200062 - L1MEd LINE L1 -5186 933 814 270 291 54 34 chr2 236488715 236488863 -14198991 - HAL1 LINE L1 -854 1653 1503 400 351 37 43 chr2 236488984 236489309 -14198545 - L1MEd LINE L1 -4883 1236 914 835 332 40 16 chr2 236489400 236489773 -14198081 + LTR16C LTR ERVL 104 485 -6 2413 103 27 8 chr2 236490390 236490758 -14197096 - THE1C LTR MaLR 0 375 1 216 143 0 0 chr2 236490763 236490805 -14197049 + (TC)n Simple_repeat Simple_repeat 2 43 0 21 36 0 0 chr2 236491993 236492021 -14195833 + AT_rich Low_complexity Low_complexity 1 28 0 32 0 0 0 chr2 236492566 236492598 -14195256 + AT_rich Low_complexity Low_complexity 1 32 0 475 0 0 0 chr2 236492610 236492663 -14195191 + L1P2 LINE L1 5763 5815 -339 401 192 0 0 chr2 236492714 236492792 -14195062 + MER67D LTR ERV1 1 78 -436 1529 169 94 7 chr2 236492842 236493150 -14194704 + MER67C LTR ERV1 68 402 -308 2314 76 0 3 chr2 236493185 236493476 -14194378 + AluSq SINE Alu 1 290 -23 249 305 105 0 chr2 236493503 236493608 -14194246 + MER67D LTR ERV1 371 486 -28 766 68 0 0 chr2 236493823 236493926 -14193928 - AluSp/q SINE Alu -2 311 209 461 275 156 6 chr2 236494054 236494214 -14193640 + MIR3 SINE MIR 24 207 -1 22 56 0 0 chr2 236494967 236495003 -14192851 + AT_rich Low_complexity Low_complexity 1 36 0 2428 47 40 0 chr2 236495476 236495775 -14192079 - AluY SINE Alu 0 311 1 713 241 15 25 chr2 236495837 236496040 -14191814 - L1MB8 LINE L1 0 6178 5978 1927 126 6 19 chr2 236496261 236496609 -14191245 - MER4A LTR ERV1 0 664 263 588 162 0 10 chr2 236496609 236496708 -14191146 - MER4A LTR ERV1 -566 98 1 312 346 8 31 chr2 236497162 236497292 -14190562 - MER5A DNA MER1_type -45 144 18 698 218 12 18 chr2 236497954 236498124 -14189730 - MLT1B LTR MaLR -42 348 180 296 202 6 0 chr2 236498163 236498231 -14189623 - L1MB1 LINE L1 -2 6166 6114 601 223 78 57 chr2 236498261 236498370 -14189484 + MLT1D LTR MaLR 1 117 -388 1782 149 0 0 chr2 236498370 236498638 -14189216 + AluJb SINE Alu 1 268 -44 601 223 78 57 chr2 236498638 236498721 -14189133 + MLT1D LTR MaLR 117 197 -308 2132 119 0 0 chr2 236498721 236499015 -14188839 + AluY SINE Alu 1 294 -17 952 174 0 35 chr2 236499017 236499189 -14188665 + AluSg/x SINE Alu 132 297 -13 836 215 85 89 chr2 236499201 236499447 -14188407 + MLT1D LTR MaLR 177 459 -46 293 246 232 7 chr2 236499503 236499641 -14188213 + MIR SINE MIR 41 209 -53 3930 182 28 8 chr2 236500311 236500617 -14187237 + L1MA9 LINE L1 5475 5773 -539 219 36 0 0 chr2 236500617 236500645 -14187209 + (CA)n Simple_repeat Simple_repeat 1 28 0 3930 182 28 8 chr2 236500645 236501129 -14186725 + L1MA9 LINE L1 5773 6281 -31 34 42 0 0 chr2 236501133 236501181 -14186673 + AT_rich Low_complexity Low_complexity 1 48 0 423 0 0 0 chr2 236502113 236502160 -14185694 + (TG)n Simple_repeat Simple_repeat 2 48 0 2245 65 39 29 chr2 236502376 236502683 -14185171 + AluY SINE Alu 1 310 -1 21 0 0 0 chr2 236502683 236502704 -14185150 + AT_rich Low_complexity Low_complexity 1 21 0 231 305 38 9 chr2 236502777 236502882 -14184972 - MER94 DNA DNA -1 133 26 534 382 91 28 chr2 236503059 236503698 -14184156 - L3 LINE CR1 -235 1342 664 193 343 0 20 chr2 236504521 236504620 -14183234 - L3b LINE CR1 -150 1433 1337 2291 123 19 27 chr2 236505025 236505392 -14182462 - THE1B LTR MaLR 0 364 1 11554 100 4 1 chr2 236505392 236506967 -14180887 - THE1B-int LTR MaLR 0 1580 2 2047 123 50 34 chr2 236506968 236507326 -14180528 - THE1B LTR MaLR 0 364 1 630 302 84 9 chr2 236507573 236507798 -14180056 - MIR SINE MIR -1 261 20 25 0 0 0 chr2 236508149 236508174 -14179680 + AT_rich Low_complexity Low_complexity 1 25 0 2257 186 99 22 chr2 236508206 236508701 -14179153 - MER44D DNA MER2_type 0 605 18 620 312 23 53 chr2 236510509 236510775 -14177079 - MIR SINE MIR -2 260 3 2182 102 0 59 chr2 236511000 236511323 -14176531 + AluSx SINE Alu 1 304 -8 206 267 0 17 chr2 236513256 236513316 -14174538 - L2 LINE L2 -962 2352 2294 1846 88 0 156 chr2 236513974 236514326 -14173528 + AluSx SINE Alu 1 297 -15 604 233 65 81 chr2 236514988 236515310 -14172544 + MER5C DNA MER1_type 1 317 -7 42 57 0 0 chr2 236516823 236516893 -14170961 + AT_rich Low_complexity Low_complexity 1 70 0 241 248 159 84 chr2 236517203 236517417 -14170437 + MER68 LTR ERV1 289 518 -44 2375 141 3 3 chr2 236520241 236520603 -14167251 + THE1B LTR MaLR 1 362 -2 2943 147 9 6 chr2 236520631 236521155 -14166699 + L1PA13 LINE L1 4808 5333 -813 3431 99 28 6 chr2 236521161 236521668 -14166186 + L1PA13 LINE L1 5644 6161 -2 270 193 0 0 chr2 236522026 236522083 -14165771 + GA-rich Low_complexity Low_complexity 2 58 0 272 285 41 24 chr2 236522396 236522519 -14165335 + ERVL LTR ERVL 4309 4433 -1331 230 312 9 83 chr2 236523844 236523953 -14163901 - MIR SINE MIR -11 251 151 601 322 34 41 chr2 236525228 236525495 -14162359 - L3 LINE CR1 -184 1393 1129 275 241 19 0 chr2 236526805 236526859 -14160995 + tRNA-Gly-GGA tRNA tRNA 21 75 0 570 268 89 0 chr2 236527826 236528016 -14159838 + MER3 DNA MER1_type 2 208 -1 1809 259 8 40 chr2 236528983 236529578 -14158276 - L1ME2 LINE L1 -10 6154 5579 192 152 0 0 chr2 236529678 236529711 -14158143 + (CACG)n Simple_repeat Simple_repeat 4 36 0 307 247 25 105 chr2 236529721 236529883 -14157971 - L1ME2 LINE L1 -861 5285 5137 617 263 120 0 chr2 236529885 236530144 -14157710 - L1ME2 LINE L1 -2535 3611 3322 325 189 95 0 chr2 236530155 236530229 -14157625 - L1ME2 LINE L1 -3224 2922 2842 3347 255 38 47 chr2 236531332 236532858 -14154996 + L1M4 LINE L1 2277 3789 -2357 2128 235 83 41 chr2 236532861 236533478 -14154376 + L1M4 LINE L1 3938 4606 -1540 1442 124 55 0 chr2 236533478 236533696 -14154158 - MER30 DNA MER1_type 0 230 1 2128 235 83 41 chr2 236533696 236533979 -14153875 + L1M4 LINE L1 4606 4876 -1270 479 221 59 15 chr2 236533979 236534115 -14153739 + MLT1H1 LTR MaLR 412 553 -2 200 122 0 24 chr2 236534449 236534490 -14153364 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 263 228 41 54 chr2 236534490 236534610 -14153244 - LTR45B LTR ERV1 -62 427 351 2264 129 0 0 chr2 236534610 236534920 -14152934 + AluSg SINE Alu 1 310 0 263 228 41 54 chr2 236534920 236534942 -14152912 - LTR45B LTR ERV1 -138 351 330 429 183 55 9 chr2 236535138 236535244 -14152610 + MLT1F LTR MaLR 419 515 -27 1576 37 5 23 chr2 236536282 236536496 -14151358 + L1PA8 LINE L1 5881 6090 -82 823 256 119 95 chr2 236536856 236537377 -14150477 + L2 LINE L2 2627 3169 -144 2192 110 0 7 chr2 236537377 236537676 -14150178 - AluSg SINE Alu -13 297 1 823 256 119 95 chr2 236537676 236537825 -14150029 + L2 LINE L2 3169 3313 0 277 415 44 0 chr2 236538241 236538400 -14149454 + L2 LINE L2 3107 3272 0 520 191 9 0 chr2 236538771 236538876 -14148978 - MER5A DNA MER1_type -80 109 4 200 347 27 0 chr2 236539980 236540055 -14147799 - MIR SINE MIR -111 151 75 317 100 0 40 chr2 236540219 236540269 -14147585 + MER75 DNA T2_type 453 500 -4 328 323 167 9 chr2 236540999 236541340 -14146514 + L1M4 LINE L1 3083 3477 -2669 3098 214 51 12 chr2 236541575 236542321 -14145533 - L1MB7 LINE L1 -11 6173 5399 2343 152 63 130 chr2 236542326 236542360 -14145494 - MLT2B1 LTR ERVL -5 515 480 426 39 0 0 chr2 236542360 236542412 -14145442 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 2343 152 63 130 chr2 236542412 236542929 -14144925 - MLT2B1 LTR ERVL -40 480 1 2593 205 37 5 chr2 236542934 236543559 -14144295 - L1MB7 LINE L1 -749 5397 4753 755 270 103 0 chr2 236543554 236543758 -14144096 - L1M4b LINE L1 -6528 331 107 * 1295 57 0 0 chr2 236543766 236543924 -14143930 - AluY SINE Alu -8 303 146 1615 320 46 30 chr2 236544031 236545109 -14142745 - L1MEc LINE L1 -5232 1164 69 461 134 0 0 chr2 236545407 236545489 -14142365 - L1MA9 LINE L1 -163 6149 6068 194 295 38 48 chr2 236545503 236545608 -14142246 + MER5A DNA MER1_type 65 168 -21 2179 121 0 0 chr2 236546694 236546991 -14140863 - AluSq SINE Alu -16 297 1 297 0 0 0 chr2 236547578 236547611 -14140243 + (TA)n Simple_repeat Simple_repeat 2 34 0 267 293 52 35 chr2 236547756 236547872 -14139982 - L2 LINE L2 -245 3068 2951 2186 106 0 0 chr2 236548132 236548443 -14139411 - AluSx SINE Alu 0 311 1 2013 134 3 0 chr2 236549512 236549802 -14138052 + AluSx SINE Alu 1 291 -21 2234 100 0 7 chr2 236550336 236550627 -14137227 + AluSq SINE Alu 1 289 -24 28 0 0 0 chr2 236550627 236550655 -14137199 + AT_rich Low_complexity Low_complexity 1 28 0 435 320 58 26 chr2 236550664 236550976 -14136878 + L1ME LINE L1 5310 5631 -490 1949 145 0 10 chr2 236553422 236553719 -14134135 + AluSx SINE Alu 1 294 -18 186 273 91 15 chr2 236554629 236554695 -14133159 - L2 LINE L2 -5 3308 3238 6058 169 39 40 chr2 236554697 236555971 -14131883 + L1MCa LINE L1 20 1291 -5135 850 98 8 8 chr2 236555964 236556096 -14131758 + L1PB4 LINE L1 5658 5789 -367 * 197 174 58 0 chr2 236556102 236556171 -14131683 + (TA)n Simple_repeat Simple_repeat 1 73 0 1568 184 23 0 chr2 236556216 236556515 -14131339 + L1PB4 LINE L1 5850 6155 -1 3805 143 179 42 chr2 236556530 236556642 -14131212 + L1MCa LINE L1 1285 1380 -5046 417 20 0 0 chr2 236556642 236556692 -14131162 + (CA)n Simple_repeat Simple_repeat 2 51 0 3805 143 179 42 chr2 236556692 236557431 -14130423 + L1MCa LINE L1 1380 2016 -4410 2013 117 11 0 chr2 236557431 236557704 -14130150 + AluSg SINE Alu 1 276 -34 191 36 36 0 chr2 236557707 236557735 -14130119 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3805 143 179 42 chr2 236557735 236557774 -14130080 + L1MCa LINE L1 2017 2049 -4377 698 227 0 0 chr2 236557774 236557906 -14129948 + FLAM_C SINE Alu 2 133 0 3805 143 179 42 chr2 236557906 236558083 -14129771 + L1MCa LINE L1 2049 2505 -3921 384 235 10 10 chr2 236558534 236558636 -14129218 + L2 LINE L2 2876 2977 -337 1483 154 174 7 chr2 236558648 236558941 -14128913 - MER7A DNA MER2_type -6 340 1 339 333 0 44 chr2 236560032 236560191 -14127663 - MIR SINE MIR -25 237 86 789 191 70 51 chr2 236560723 236560938 -14126916 - MER20 DNA MER1_type 0 219 1 309 317 76 27 chr2 236560955 236561179 -14126675 + MIR SINE MIR 23 257 -5 669 298 113 63 chr2 236562067 236562687 -14125167 - HAL1 LINE L1 -884 1623 973 348 194 0 146 chr2 236563426 236563570 -14124284 - LTR41 LTR ERVL -11 762 640 18719 80 11 7 chr2 236563570 236566195 -14121659 - L1PA6 LINE L1 -1721 4425 1790 7072 78 6 0 chr2 236566195 236567926 -14119928 + L1PA6 LINE L1 4416 6152 -2 873 269 114 63 chr2 236567937 236568558 -14119296 - LTR41 LTR ERVL -120 653 1 554 233 67 20 chr2 236568642 236568792 -14119062 - MER5A DNA MER1_type 0 189 33 281 370 27 27 chr2 236569702 236569886 -14117968 + MIR3 SINE MIR 18 201 -7 33 0 0 0 chr2 236570506 236570539 -14117315 + AT_rich Low_complexity Low_complexity 1 33 0 250 250 0 0 chr2 236571213 236571265 -14116589 + L2 LINE L2 3244 3295 -18 808 133 0 0 chr2 236571281 236571409 -14116445 + AluSp/q SINE Alu 182 309 -4 719 269 6 6 chr2 236571519 236571675 -14116179 - MER5B DNA MER1_type -22 156 1 452 262 68 63 chr2 236571678 236572044 -14115810 - L1MEd LINE L1 -5098 1021 654 228 225 25 12 chr2 236572458 236572538 -14115316 - L1MEd LINE L1 -5980 139 59 1759 164 17 17 chr2 236572980 236572994 -14114860 - AluSx SINE Alu -13 299 286 189 0 0 0 chr2 236572994 236573015 -14114839 + (TG)n Simple_repeat Simple_repeat 2 22 0 1759 164 17 17 chr2 236573015 236573298 -14114556 - AluSx SINE Alu -25 287 2 939 186 72 14 chr2 236574169 236574530 -14113324 - L1MC2 LINE L1 -2 6342 5841 198 189 0 0 chr2 236574752 236574789 -14113065 + MIR SINE MIR 112 148 -114 220 280 9 37 chr2 236574862 236574969 -14112885 + GA-rich Low_complexity Low_complexity 4 107 0 2272 94 3 0 chr2 236577807 236578106 -14109748 - AluY SINE Alu -11 300 1 3822 65 0 0 chr2 236579550 236580030 -14107824 - L1PA7 LINE L1 -8 6146 5667 3924 255 92 32 chr2 236580030 236581973 -14105881 - L1ME2 LINE L1 -69 6029 3957 236 29 0 29 chr2 236581973 236582007 -14105847 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 3924 255 92 32 chr2 236582007 236582734 -14105120 - L1ME2 LINE L1 -2141 3957 3275 1061 225 71 146 chr2 236582742 236583451 -14104403 - L1ME2 LINE L1 -3131 2949 2394 2263 94 3 10 chr2 236583451 236583748 -14104106 + AluSx SINE Alu 1 295 -17 1061 225 71 146 chr2 236583748 236584131 -14103723 - L1ME2 LINE L1 -3686 2394 1984 1176 279 63 38 chr2 236584325 236585222 -14102632 - L1ME2 LINE L1 -4362 1718 799 363 133 36 96 chr2 236585244 236585292 -14102562 - AluSg/x SINE Alu -6 296 254 6990 58 26 11 chr2 236585292 236586170 -14101684 - MER11D LTR ERVK 0 897 7 1871 139 0 0 chr2 236586170 236586428 -14101426 - AluSx SINE Alu -52 260 3 1037 285 76 72 chr2 236586430 236587139 -14100715 - L1ME2 LINE L1 -5279 791 80 1627 45 0 0 chr2 236587139 236587340 -14100514 - L1PA4 LINE L1 -2 6153 5953 958 43 0 0 chr2 236587340 236587457 -14100397 + L1PA4 LINE L1 5836 5952 -202 377 227 0 0 chr2 236588077 236588152 -14099702 - MER116 DNA Mariner -2 78 4 611 302 109 23 chr2 236588328 236589077 -14098777 + L1ME LINE L1 4883 5704 -458 22 35 0 0 chr2 236589143 236589172 -14098682 + AT_rich Low_complexity Low_complexity 1 29 0 1321 217 3 27 chr2 236589248 236589547 -14098307 - AluJo SINE Alu -11 301 10 26 50 0 0 chr2 236589627 236589667 -14098187 + AT_rich Low_complexity Low_complexity 1 40 0 26 74 0 0 chr2 236589777 236589831 -14098023 + AT_rich Low_complexity Low_complexity 1 54 0 32 43 0 0 chr2 236589928 236589974 -14097880 + AT_rich Low_complexity Low_complexity 1 46 0 208 0 0 0 chr2 236590612 236590635 -14097219 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1949 127 0 7 chr2 236590635 236590919 -14096935 - AluSx SINE Alu -30 282 1 249 290 196 28 chr2 236591489 236591703 -14096151 + MIR SINE MIR 11 260 -2 334 347 46 7 chr2 236591827 236592064 -14095790 - L1M4 LINE L1 -2309 3837 3592 499 294 19 13 chr2 236592140 236592450 -14095404 - L1M4 LINE L1 -2651 3495 3184 437 280 47 48 chr2 236592525 236592769 -14095085 + L2 LINE L2 2802 3050 -263 260 294 63 71 chr2 236592848 236592974 -14094880 + MIR3 SINE MIR 82 206 -2 1021 199 4 8 chr2 236593322 236593563 -14094291 + L1P LINE L1 4955 5194 -952 21 0 0 0 chr2 236594431 236594452 -14093402 + AT_rich Low_complexity Low_complexity 1 21 0 10704 56 0 2 chr2 236594577 236596017 -14091837 - L1P LINE L1 -3810 2336 900 1529 179 33 43 chr2 236596336 236596637 -14091217 + AluJb SINE Alu 1 298 -14 220 357 198 0 chr2 236597858 236597984 -14089870 - L2 LINE L2 0 3272 3122 682 208 8 0 chr2 236598228 236598358 -14089496 - MER2 DNA MER2_type -212 133 3 301 269 0 0 chr2 236598360 236598438 -14089416 + (TATG)n Simple_repeat Simple_repeat 3 80 0 303 353 53 23 chr2 236599822 236599955 -14087899 + L1ME LINE L1 290 426 -5644 1098 233 155 8 chr2 236600596 236601098 -14086756 + L1ME LINE L1 5112 5687 -475 2156 119 0 0 chr2 236601360 236601646 -14086208 + AluSx SINE Alu 1 286 -26 245 223 39 48 chr2 236602886 236602989 -14084865 + LTR67 LTR ERVL 450 551 -6 29 60 0 0 chr2 236603518 236603568 -14084286 + AT_rich Low_complexity Low_complexity 1 50 0 1923 185 49 35 chr2 236603582 236604096 -14083758 - L1MA7 LINE L1 -60 6231 5711 2751 205 31 35 chr2 236604128 236604807 -14083047 + LTR8 LTR ERV1 16 691 0 462 160 0 21 chr2 236604809 236604903 -14082951 - L1MA7 LINE L1 -579 5712 5621 198 0 0 0 chr2 236605808 236605830 -14082024 + (A)n Simple_repeat Simple_repeat 1 22 0 262 176 0 0 chr2 236606281 236606332 -14081522 + L1MA9 LINE L1 6068 6118 -194 21 36 0 0 chr2 236606386 236606414 -14081440 + AT_rich Low_complexity Low_complexity 1 28 0 1113 291 50 10 chr2 236606822 236607570 -14080284 - L1MDa LINE L1 -1981 4960 4153 301 217 0 104 chr2 236607631 236607737 -14080117 + MLT1H LTR MaLR 428 522 -27 373 199 137 56 chr2 236607800 236607961 -14079893 - L1MDa LINE L1 -2868 4073 3900 1719 150 106 19 chr2 236608063 236608442 -14079412 - L1PA16 LINE L1 0 6166 5755 347 226 15 109 chr2 236608448 236608585 -14079269 - L1MDa LINE L1 -5111 1830 1707 238 256 39 31 chr2 236608610 236608739 -14079115 - L1MDa LINE L1 -4923 1500 1371 1309 229 105 57 chr2 236609007 236609483 -14078371 + MLT1D LTR MaLR 3 501 -4 1139 247 49 25 chr2 236609490 236609668 -14078186 + MLT1A2 LTR MaLR 1 173 -201 213 39 0 0 chr2 236609668 236609694 -14078160 + (TC)n Simple_repeat Simple_repeat 2 27 0 1139 247 49 25 chr2 236609694 236609880 -14077974 + MLT1A2 LTR MaLR 173 374 0 230 311 27 20 chr2 236610221 236610369 -14077485 - L1MDa LINE L1 -5855 1076 928 295 192 128 24 chr2 236610548 236610673 -14077181 + LTR48 LTR ERV1 348 485 -302 443 224 42 79 chr2 236610710 236610875 -14076979 + LTR48 LTR ERV1 629 787 0 248 343 10 29 chr2 236611011 236611113 -14076741 - L2 LINE L2 -1 3312 3213 658 212 5 63 chr2 236611165 236611354 -14076500 - LTR49 LTR ERV1 -414 181 4 21 36 0 0 chr2 236611824 236611852 -14076002 + AT_rich Low_complexity Low_complexity 1 28 0 5885 163 37 8 chr2 236611875 236613927 -14073927 - L1MA4 LINE L1 -35 6447 4335 975 124 11 11 chr2 236613927 236614071 -14073783 + (TTTC)n Simple_repeat Simple_repeat 1 322 0 975 124 11 11 chr2 236614071 236614249 -14073605 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2976 201 7 8 chr2 236614265 236614863 -14072991 - L1MA4 LINE L1 -4730 598 2 7561 29 0 0 chr2 236615123 236616486 -14071368 - L1PA4 LINE L1 -2 6153 4791 3618 60 10 2 chr2 236616626 236617108 -14070746 + L1PA2 LINE L1 5665 6150 -5 1717 190 43 53 chr2 236617108 236617598 -14070256 + L1 LINE L1 4739 5223 -923 2658 225 21 8 chr2 236617616 236618221 -14069633 + L1M1 LINE L1 1100 1712 -5853 327 54 36 0 chr2 236618269 236618325 -14069529 + L1MA4A LINE L1 6232 6289 -14 1516 159 45 3 chr2 236618487 236618777 -14069077 - AluSx SINE Alu -10 302 1 2301 216 24 24 chr2 236618787 236618948 -14068906 - L1 LINE L1 -3235 2911 2751 1797 98 11 25 chr2 236618948 236619222 -14068632 + AluY SINE Alu 37 306 -5 2301 216 24 24 chr2 236619222 236619685 -14068169 - L1 LINE L1 -3394 2752 2287 1995 100 30 24 chr2 236619673 236620003 -14067851 + THE1C-int LTR MaLR 1249 1580 0 * 1505 127 124 43 chr2 236620003 236620350 -14067504 + THE1C LTR MaLR 1 375 0 2220 136 0 0 chr2 236620713 236621015 -14066839 - AluSq SINE Alu -11 302 1 259 226 69 20 chr2 236621248 236621350 -14066504 - L1ME4a LINE L1 -44 6077 5971 28 29 0 0 chr2 236623368 236623403 -14064451 + AT_rich Low_complexity Low_complexity 1 35 0 1362 196 23 4 chr2 236623841 236624106 -14063748 - AluJo SINE Alu -5 307 38 2359 80 0 0 chr2 236624412 236624712 -14063142 - AluY SINE Alu -11 300 1 3761 225 78 16 chr2 236625628 236626601 -14061253 - MER45B DNA AcHobo -3 1037 5 2280 102 0 3 chr2 236627021 236627315 -14060539 + AluSx SINE Alu 10 302 -10 441 314 87 13 chr2 236628085 236628314 -14059540 - MIR SINE MIR 0 262 17 21 36 0 0 chr2 236628586 236628614 -14059240 + AT_rich Low_complexity Low_complexity 1 28 0 2454 40 13 3 chr2 236628794 236629092 -14058762 + AluY SINE Alu 1 301 -10 21 36 0 0 chr2 236629279 236629307 -14058547 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 236629851 236629875 -14057979 + AT_rich Low_complexity Low_complexity 1 24 0 191 271 21 0 chr2 236630291 236630339 -14057515 + L2 LINE L2 3264 3312 -1 1849 150 0 35 chr2 236630698 236631011 -14056843 - AluSx SINE Alu -10 302 1 357 317 11 55 chr2 236631530 236631713 -14056141 + MIR SINE MIR 53 227 -35 7121 72 123 6 chr2 236632427 236633540 -14054314 + L1P LINE L1 2 1244 -4902 2303 60 3 13 chr2 236633704 236634002 -14053852 - AluY SINE Alu -3 308 14 323 297 29 23 chr2 236634171 236634346 -14053508 + (TATG)n Simple_repeat Simple_repeat 3 178 0 517 308 63 0 chr2 236634738 236634897 -14052957 + MER5A DNA MER1_type 18 186 -3 1917 136 4 4 chr2 236636322 236636632 -14051222 + AluSg SINE Alu 1 310 0 554 250 85 0 chr2 236636941 236637105 -14050749 + MER45A DNA AcHobo 1 178 0 28679 29 1 0 chr2 236637394 236640998 -14046856 + L1P LINE L1 1392 4996 -1150 287 208 52 13 chr2 236641174 236641251 -14046603 - MLT1A2 LTR MaLR -11 363 284 1563 148 139 60 chr2 236641372 236641804 -14046050 - MER31B LTR ERV1 0 466 1 262 267 76 0 chr2 236642249 236642354 -14045500 - MLT1L LTR MaLR -6 609 497 23 54 0 0 chr2 236642373 236642410 -14045444 + AT_rich Low_complexity Low_complexity 1 37 0 2665 77 14 11 chr2 236642538 236642901 -14044953 + THE1B LTR MaLR 1 364 0 874 185 87 6 chr2 236643793 236643966 -14043888 - MSTB1 LTR MaLR -102 330 144 12879 22 1 5 chr2 236643966 236645881 -14041973 + L1P1 LINE L1 3870 5774 -381 757 199 6 6 chr2 236646022 236646178 -14041676 - MSTB1 LTR MaLR -276 156 1 207 69 0 0 chr2 236646314 236646343 -14041511 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr2 236647437 236647458 -14040396 + AT_rich Low_complexity Low_complexity 1 21 0 685 277 42 36 chr2 236647749 236648068 -14039786 + L2 LINE L2 2718 3055 -258 327 49 0 0 chr2 236648071 236648112 -14039742 + (TG)n Simple_repeat Simple_repeat 2 42 0 865 197 47 11 chr2 236648117 236648371 -14039483 + MLT1B LTR MaLR 1 362 -28 224 29 0 29 chr2 236648371 236648405 -14039449 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 865 197 47 11 chr2 236648405 236648436 -14039418 + MLT1B LTR MaLR 362 390 0 324 208 19 47 chr2 236648554 236648660 -14039194 + L2 LINE L2 3106 3208 -105 689 245 248 61 chr2 236649309 236649780 -14038074 - MLT1G1 LTR MaLR -2 588 30 245 292 0 0 chr2 236650630 236650695 -14037159 + MIR3 SINE MIR 137 201 -7 462 245 91 7 chr2 236651282 236651425 -14036429 - MIR SINE MIR -16 246 92 225 132 0 0 chr2 236652658 236652696 -14035158 + (TTGG)n Simple_repeat Simple_repeat 4 41 0 348 295 0 9 chr2 236653216 236653321 -14034533 + MIR SINE MIR 95 198 -64 343 346 112 5 chr2 236653388 236653602 -14034252 + L3 LINE CR1 1338 1574 -3 27 49 0 0 chr2 236654184 236654225 -14033629 + AT_rich Low_complexity Low_complexity 1 41 0 844 259 32 73 chr2 236654799 236655010 -14032844 + MLT1I LTR MaLR 71 264 -145 1768 169 71 3 chr2 236655010 236655335 -14032519 - MER7A DNA MER2_type 0 346 2 844 259 32 73 chr2 236655335 236655467 -14032387 + MLT1I LTR MaLR 264 400 -9 2210 129 3 0 chr2 236655814 236656125 -14031729 + AluSq SINE Alu 1 312 -1 1407 227 45 41 chr2 236656270 236656390 -14031464 - Charlie1b DNA MER1_type -2266 495 377 4288 27 6 6 chr2 236656390 236656910 -14030944 + L1PA4 LINE L1 5636 6155 0 1407 227 45 41 chr2 236656910 236657256 -14030598 - Charlie1b DNA MER1_type -2384 377 27 506 31 0 0 chr2 236657821 236657885 -14029969 - L1PA4 LINE L1 -3 6152 6089 252 304 76 0 chr2 236658113 236658205 -14029649 + L2 LINE L2 3203 3301 -12 1987 178 38 28 chr2 236660095 236660641 -14027213 + MLT2A2 LTR ERVL 1 554 0 631 234 18 48 chr2 236661378 236661545 -14026309 - MIR SINE MIR -5 257 96 295 311 18 70 chr2 236661764 236661992 -14025862 + MLT1I LTR MaLR 79 294 -115 283 205 111 7 chr2 236661999 236662109 -14025745 + MLT1J2 LTR MaLR 339 620 -6 506 308 61 48 chr2 236662401 236662713 -14025141 + HAL1 LINE L1 766 1081 -1426 348 244 7 67 chr2 236663058 236663193 -14024661 - L1MC4 LINE L1 -974 7068 6942 319 304 89 44 chr2 236663245 236663403 -14024451 - MIR SINE MIR -61 201 37 1646 150 12 77 chr2 236663701 236664028 -14023826 + AluJo SINE Alu 1 306 -6 1425 177 51 104 chr2 236664165 236664577 -14023277 + MLT1B LTR MaLR 1 390 0 450 234 110 43 chr2 236665407 236665616 -14022238 + L1MC4 LINE L1 6907 7129 -913 267 114 0 0 chr2 236666086 236666130 -14021724 + (GGA)n Simple_repeat Simple_repeat 3 46 0 376 286 80 114 chr2 236666367 236666744 -14021110 - LTR67 LTR ERVL -92 465 102 12296 30 5 2 chr2 236666858 236669076 -14018778 + L1PA2 LINE L1 3916 6136 -19 662 202 110 23 chr2 236669493 236669666 -14018188 - MER5A DNA MER1_type -1 188 1 242 347 64 53 chr2 236669720 236669985 -14017869 - L2 LINE L2 -601 2713 2446 810 118 20 0 chr2 236670049 236670201 -14017653 + (TAGA)n Simple_repeat Simple_repeat 4 158 0 3120 31 8 0 chr2 236670568 236670952 -14016902 + L1PA2 LINE L1 5768 6154 -1 554 157 116 16 chr2 236671318 236671439 -14016415 - FLAM_C SINE Alu 0 133 1 25 51 0 0 chr2 236674293 236674332 -14013522 + AT_rich Low_complexity Low_complexity 1 39 0 1050 190 5 40 chr2 236674622 236674822 -14013032 + AluJb SINE Alu 97 289 -23 321 303 57 8 chr2 236674904 236675026 -14012828 - MIR SINE MIR -50 212 85 3522 161 27 37 chr2 236675408 236676078 -14011776 - LTR58 LTR ERV1 -16 663 1 2050 167 31 0 chr2 236676168 236676521 -14011333 + THE1B LTR MaLR 1 364 0 314 247 0 12 chr2 236676529 236676610 -14011244 + MLT1F1 LTR MaLR 46 125 -442 2728 153 79 11 chr2 236676610 236677167 -14010687 + L1MC3 LINE L1 7191 7785 0 20057 166 23 7 chr2 236678075 236681618 -14006236 + L1M1 LINE L1 10 3610 -3955 2029 100 65 3 chr2 236681615 236681842 -14006012 - L1P5 LINE L1 -427 5724 5472 * 189 0 0 0 chr2 236681842 236681863 -14005991 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2029 100 65 3 chr2 236681863 236681944 -14005910 - L1P5 LINE L1 -679 5472 5397 2205 122 25 2 chr2 236682187 236682582 -14005272 + L1MA1 LINE L1 3207 3610 -3955 2029 100 65 3 chr2 236682579 236682806 -14005048 - L1P5 LINE L1 -427 5724 5472 * 189 0 0 0 chr2 236682806 236682827 -14005027 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2029 100 65 3 chr2 236682827 236682908 -14004946 - L1P5 LINE L1 -679 5472 5397 4749 189 35 19 chr2 236682918 236683988 -14003866 - L1 LINE L1 -1236 4910 3823 1052 124 51 7 chr2 236683982 236684258 -14003596 + L1PB1 LINE L1 5736 6149 -2 * 14424 198 15 6 chr2 236684290 236687567 -14000287 + L1MA1 LINE L1 3595 6904 -743 1610 140 31 23 chr2 236687568 236687885 -13999969 + THE1B LTR MaLR 1 364 0 4078 120 21 22 chr2 236687885 236688552 -13999302 + L1MA1 LINE L1 6901 7566 -155 3229 214 58 25 chr2 236688560 236689375 -13998479 + L1P3 LINE L1 10 851 -5610 7859 167 23 29 chr2 236689503 236691552 -13996302 + L1P3 LINE L1 549 2603 -3858 339 252 115 72 chr2 236692026 236692338 -13995516 + HAL1b LINE L1 126 471 -877 1188 143 25 0 chr2 236692383 236692586 -13995268 + MER2 DNA MER2_type 2 209 -136 698 256 93 67 chr2 236692683 236693264 -13994590 + HAL1b LINE L1 496 1091 -257 382 317 78 0 chr2 236693407 236693574 -13994280 + MIR SINE MIR 67 246 -16 26 50 0 0 chr2 236693625 236693665 -13994189 + AT_rich Low_complexity Low_complexity 1 40 0 243 180 0 0 chr2 236693830 236693860 -13993994 + (TA)n Simple_repeat Simple_repeat 1 33 -17 216 0 0 0 chr2 236693860 236693884 -13993970 + (TC)n Simple_repeat Simple_repeat 2 25 0 243 180 0 0 chr2 236693884 236693903 -13993951 + (TA)n Simple_repeat Simple_repeat 32 50 0 2222 163 19 60 chr2 236694457 236695283 -13992571 + L1M2 LINE L1 4793 5606 -706 21 0 0 0 chr2 236695802 236695823 -13992031 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 236696909 236696947 -13990907 + AT_rich Low_complexity Low_complexity 1 38 0 735 288 134 36 chr2 236698741 236699374 -13988480 + L2 LINE L2 2643 3312 -1 632 238 92 12 chr2 236701965 236702129 -13985725 - MER5B DNA MER1_type -1 177 1 180 64 64 21 chr2 236702561 236702608 -13985246 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 324 321 72 43 chr2 236702815 236703024 -13984830 + MIR SINE MIR 21 235 -27 274 268 73 24 chr2 236703066 236703189 -13984665 + MER94 DNA DNA 6 134 0 2061 124 0 0 chr2 236703280 236703555 -13984299 + AluSg SINE Alu 6 280 -30 539 287 37 16 chr2 236703581 236703769 -13984085 + MIR SINE MIR 71 262 0 296 327 138 53 chr2 236704488 236705127 -13982727 + L2 LINE L2 1712 2404 -910 561 340 47 13 chr2 236705150 236705382 -13982472 + MIR SINE MIR 23 262 0 188 389 62 30 chr2 236705381 236705782 -13982072 + L2 LINE L2 2381 2794 -520 * 232 82 20 20 chr2 236706261 236706310 -13981544 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 305 275 8 0 chr2 236706311 236706358 -13981496 + (TA)n Simple_repeat Simple_repeat 1 46 -75 971 214 125 29 chr2 236706358 236706671 -13981183 + MER2 DNA MER2_type 2 344 0 305 275 8 0 chr2 236706671 236706743 -13981111 + (TA)n Simple_repeat Simple_repeat 46 121 0 2207 183 70 0 chr2 236707383 236707781 -13980073 + MSTB LTR MaLR 1 426 0 591 291 27 72 chr2 236708046 236708379 -13979475 - MLT1L LTR MaLR -153 462 145 180 77 0 0 chr2 236709224 236709250 -13978604 + (TG)n Simple_repeat Simple_repeat 2 27 0 468 284 39 64 chr2 236709543 236709747 -13978107 - MIR SINE MIR -52 210 12 2052 170 40 28 chr2 236710515 236710944 -13976910 - Tigger2a DNA MER2_type 0 434 1 487 336 96 16 chr2 236711283 236711730 -13976124 + L2 LINE L2 1923 2405 -909 253 412 100 6 chr2 236711785 236711955 -13975899 + L2 LINE L2 2569 2754 -560 287 353 210 27 chr2 236712057 236712357 -13975497 + L2 LINE L2 2917 3271 -1 274 198 21 161 chr2 236713583 236713697 -13974157 - MER112 DNA MER1_type -89 171 93 273 109 0 0 chr2 236713697 236713743 -13974111 + (TG)n Simple_repeat Simple_repeat 1 46 0 274 198 21 161 chr2 236713743 236713820 -13974034 - MER112 DNA MER1_type -167 93 7 980 60 15 0 chr2 236713998 236714132 -13973722 - L1PA7 LINE L1 0 6154 6019 1644 79 0 0 chr2 236714524 236714740 -13973114 - L1PA7 LINE L1 0 6154 5939 5106 43 11 3 chr2 236714740 236715438 -13972416 + L1PA7 LINE L1 5231 5933 -221 369 168 36 36 chr2 236716551 236716718 -13971136 + (GTGTG)n Simple_repeat Simple_repeat 4 170 0 195 303 46 37 chr2 236716870 236716979 -13970875 - L2 LINE L2 -108 3205 3096 1744 235 55 73 chr2 236717019 236717675 -13970179 + MLT1E1 LTR MaLR 1 644 -10 1153 210 27 23 chr2 236719184 236719484 -13968370 - MLT1A1 LTR MaLR 0 365 65 288 214 71 14 chr2 236719497 236719567 -13968287 + MLT1E2 LTR MaLR 325 398 -228 249 220 34 0 chr2 236719568 236719627 -13968227 - MLT1A1 LTR MaLR -313 61 1 199 365 14 0 chr2 236719876 236719950 -13967904 + L2 LINE L2 2230 2304 -1010 3153 153 36 7 chr2 236719976 236720553 -13967301 - LTR26 LTR ERV1 -9 594 1 392 376 73 16 chr2 236720568 236720940 -13966914 + L2 LINE L2 2349 2741 -573 265 175 0 63 chr2 236720946 236721009 -13966845 - L1MA7 LINE L1 -238 6053 5995 552 159 28 0 chr2 236721010 236721117 -13966737 + L1MA7 LINE L1 6176 6285 -6 191 381 12 0 chr2 236721156 236721240 -13966614 + L2 LINE L2 2775 2859 -455 28 0 0 0 chr2 236722214 236722242 -13965612 + AT_rich Low_complexity Low_complexity 1 28 0 732 91 0 0 chr2 236722280 236722390 -13965464 + (TTTC)n Simple_repeat Simple_repeat 1 110 0 666 153 0 9 chr2 236722390 236722501 -13965353 - AluJb SINE Alu -201 111 2 985 306 158 5 chr2 236723176 236723555 -13964299 + L2 LINE L2 2339 2775 -539 1097 298 47 20 chr2 236723638 236723712 -13964142 - LTR16B LTR ERVL 0 464 393 3225 174 76 8 chr2 236723712 236724331 -13963523 - MER67B LTR ERV1 0 661 1 1097 298 47 20 chr2 236724331 236724702 -13963152 - LTR16B LTR ERVL -71 393 7 845 293 97 23 chr2 236724708 236725101 -13962753 + L2 LINE L2 2887 3308 -5 330 26 0 0 chr2 236725265 236725304 -13962550 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1940 128 7 0 chr2 236725304 236725578 -13962276 - AluSx SINE Alu -36 276 1 243 333 100 17 chr2 236728985 236729105 -13958749 + MIR3 SINE MIR 52 181 -27 2717 96 5 11 chr2 236729946 236730323 -13957531 + THE1C LTR MaLR 1 375 0 2437 266 82 31 chr2 236730638 236731457 -13956397 + MER69B DNA AcHobo 1 899 -1627 1275 214 154 31 chr2 236731457 236731873 -13955981 - MLT1C LTR MaLR 0 467 1 2437 266 82 31 chr2 236731873 236732219 -13955635 + MER69B DNA AcHobo 899 1226 0 204 327 41 64 chr2 236732315 236732535 -13955319 + L2 LINE L2 2723 2937 -377 202 356 76 0 chr2 236732691 236732809 -13955045 + L2 LINE L2 3146 3272 0 1472 242 147 39 chr2 236733082 236733748 -13954106 - MER21B LTR ERV1 -111 752 15 735 69 0 0 chr2 236733748 236733850 -13954004 + (TTC)n Simple_repeat Simple_repeat 1 102 0 1925 145 0 0 chr2 236733984 236734267 -13953587 - AluSx SINE Alu -29 283 1 405 0 0 0 chr2 236734428 236734473 -13953381 + (TG)n Simple_repeat Simple_repeat 2 46 0 399 84 14 0 chr2 236735506 236735577 -13952277 - L1MA4A LINE L1 0 6303 6232 626 173 22 22 chr2 236735624 236735763 -13952091 - L1M1 LINE L1 -5853 1712 1574 241 69 0 0 chr2 236735928 236735965 -13951889 + L1PA16 LINE L1 5883 5919 -235 1297 153 40 8 chr2 236736162 236736411 -13951443 + L1PA16 LINE L1 5905 6161 -5 4076 163 25 38 chr2 236736455 236736738 -13951116 + L1MB3 LINE L1 5317 5602 -581 2287 99 3 0 chr2 236736738 236737032 -13950822 + AluSg SINE Alu 1 295 -15 4076 163 25 38 chr2 236737032 236737623 -13950231 + L1MB3 LINE L1 5602 6180 -3 2357 106 0 0 chr2 236738113 236738415 -13949439 + AluSg SINE Alu 1 302 -8 2089 130 7 7 chr2 236738453 236738796 -13949058 + AluSx SINE Alu 1 343 0 2109 62 4 7 chr2 236740595 236740871 -13946983 + L1PA7 LINE L1 5880 6154 0 719 232 155 5 chr2 236741458 236741665 -13946189 - MIR SINE MIR -3 259 22 1638 187 22 19 chr2 236742245 236742609 -13945245 + MLT2D LTR ERVL 2 366 -48 202 200 0 0 chr2 236742609 236742644 -13945210 + CT-rich Low_complexity Low_complexity 3 37 0 306 0 0 0 chr2 236742684 236742718 -13945136 + (TG)n Simple_repeat Simple_repeat 1 34 0 217 317 17 50 chr2 236742720 236742840 -13945014 - MIR3 SINE MIR -50 158 43 1916 142 3 0 chr2 236743646 236743952 -13943902 + AluSg SINE Alu 1 307 0 24 91 0 0 chr2 236744381 236744447 -13943407 + AT_rich Low_complexity Low_complexity 1 66 0 1664 179 35 6 chr2 236745372 236745712 -13942142 + L1MD2 LINE L1 5647 5996 -363 625 143 86 29 chr2 236745714 236745923 -13941931 + Charlie2 DNA MER1_type 2271 2491 -371 899 178 110 3 chr2 236746450 236746742 -13941112 + Charlie2 DNA MER1_type 2474 2796 -66 1281 261 50 7 chr2 236746843 236747303 -13940551 + L1MC4 LINE L1 5403 5882 -1926 1026 90 0 0 chr2 236747314 236747447 -13940407 + AluSq/x SINE Alu 1 133 -180 278 158 0 18 chr2 236747449 236747535 -13940319 + Alu SINE Alu 235 302 0 3695 245 103 41 chr2 236747538 236749503 -13938351 + L1MC4 LINE L1 5917 8042 0 198 127 18 36 chr2 236750130 236750185 -13937669 + GA-rich Low_complexity Low_complexity 1 54 0 2221 115 0 0 chr2 236750187 236750483 -13937371 - AluSx SINE Alu -16 296 1 22 0 0 0 chr2 236752110 236752132 -13935722 + AT_rich Low_complexity Low_complexity 1 22 0 2085 141 0 3 chr2 236752140 236752431 -13935423 - AluSx SINE Alu -21 291 2 438 20 0 0 chr2 236753525 236753576 -13934278 + (TG)n Simple_repeat Simple_repeat 1 51 0 24 0 0 0 chr2 236753753 236753777 -13934077 + AT_rich Low_complexity Low_complexity 1 24 0 543 223 80 44 chr2 236754757 236754951 -13932903 - MIR SINE MIR 0 262 64 428 278 97 64 chr2 236756206 236756566 -13931288 - L1MC/D LINE L1 -473 5648 5275 291 296 0 0 chr2 236757088 236757169 -13930685 + (TA)n Simple_repeat Simple_repeat 1 81 0 1984 142 0 7 chr2 236758514 236758810 -13929044 - AluSx SINE Alu -13 299 6 420 248 18 35 chr2 236760539 236760652 -13927202 - L2 LINE L2 0 3313 3203 268 259 14 95 chr2 236761734 236761881 -13925973 + LTR37A LTR ERV1 4 138 -288 625 206 19 48 chr2 236761916 236762125 -13925729 + LTR37A LTR ERV1 224 426 0 270 306 51 9 chr2 236763058 236763168 -13924686 - MIR SINE MIR -45 163 49 280 79 0 175 chr2 236763491 236763554 -13924300 + MLT1F LTR MaLR 491 542 0 38 0 0 0 chr2 236763770 236763808 -13924046 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr2 236764208 236764230 -13923624 + AT_rich Low_complexity Low_complexity 1 22 0 2024 111 3 60 chr2 236764333 236764649 -13923205 + AluSx SINE Alu 1 298 -14 188 271 0 42 chr2 236765921 236765969 -13921885 + L2 LINE L2 3157 3202 -70 333 329 113 36 chr2 236766571 236766793 -13921061 - MIR SINE MIR -19 243 5 437 269 112 15 chr2 236766971 236767105 -13920749 - L2 LINE L2 -3 3310 3164 12916 184 22 19 chr2 236767170 236771085 -13916769 - L1MA7 LINE L1 0 6291 2367 369 345 35 30 chr2 236771274 236771474 -13916380 - L2 LINE L2 -562 2752 2552 220 195 0 0 chr2 236772712 236772753 -13915101 + (CA)n Simple_repeat Simple_repeat 2 42 0 180 0 0 0 chr2 236772890 236772910 -13914944 + (A)n Simple_repeat Simple_repeat 1 20 0 595 356 101 8 chr2 236773378 236773625 -13914229 - L2 LINE L2 -18 3254 2985 2351 118 25 8 chr2 236774130 236774495 -13913359 - THE1C LTR MaLR -4 371 1 203 290 112 71 chr2 236775003 236775172 -13912682 + L2 LINE L2 2914 3089 -183 261 255 106 57 chr2 236775924 236776065 -13911789 - MIR SINE MIR -73 189 42 324 0 0 0 chr2 236776321 236776357 -13911497 + (TG)n Simple_repeat Simple_repeat 1 36 0 203 235 148 37 chr2 236777179 236777260 -13910594 - L2 LINE L2 -15 3257 3168 686 268 75 0 chr2 236777425 236777638 -13910216 + MIR SINE MIR 34 262 0 1171 219 119 24 chr2 236777722 236778101 -13909753 - LTR52 LTR ERVL -5 416 2 21 0 0 0 chr2 236778218 236778239 -13909615 + AT_rich Low_complexity Low_complexity 1 21 0 532 218 57 8 chr2 236778582 236778706 -13909148 - MIR SINE MIR -10 252 123 22 0 0 0 chr2 236779355 236779377 -13908477 + AT_rich Low_complexity Low_complexity 1 22 0 2205 127 0 3 chr2 236779484 236779792 -13908062 + AluSg SINE Alu 1 307 -3 2484 67 0 0 chr2 236780202 236780502 -13907352 - AluY SINE Alu -11 300 1 1504 187 36 31 chr2 236782137 236782496 -13905358 - MER47A DNA MER2_type -5 361 1 502 285 39 34 chr2 236783209 236783388 -13904466 + MER5A DNA MER1_type 10 189 0 10196 105 11 10 chr2 236783574 236785886 -13901968 - L1PA7 LINE L1 -3 6151 3839 24 0 0 0 chr2 236786538 236786562 -13901292 + AT_rich Low_complexity Low_complexity 1 24 0 350 333 79 74 chr2 236787451 236787908 -13899946 + L2 LINE L2 2809 3267 -5 2405 140 18 42 chr2 236787912 236788368 -13899486 + MER65A LTR ERV1 1 445 0 502 322 94 3 chr2 236789002 236789288 -13898566 + HsTC2 DNA Tc2 514 825 -1073 1967 234 64 26 chr2 236789570 236790116 -13897738 + MLT1E2 LTR MaLR 52 618 -8 183 355 57 16 chr2 236792541 236792665 -13895189 + L2 LINE L2 3185 3313 0 21 36 0 0 chr2 236793097 236793125 -13894729 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr2 236793271 236793300 -13894554 + AT_rich Low_complexity Low_complexity 1 29 0 2100 167 3 3 chr2 236793350 236793716 -13894138 - MER47A DNA MER2_type 0 366 1 252 0 0 0 chr2 236794088 236794116 -13893738 + (CA)n Simple_repeat Simple_repeat 2 29 0 777 235 51 41 chr2 236794484 236794778 -13893076 + L1ME3A LINE L1 5864 6160 -10 214 234 125 0 chr2 236795447 236795511 -13892343 - L2 LINE L2 -1 3271 3200 212 197 0 33 chr2 236795586 236795647 -13892207 + GA-rich Low_complexity Low_complexity 3 61 0 281 185 0 19 chr2 236797968 236798022 -13889832 - L2 LINE L2 -4 3309 3257 24 77 0 0 chr2 236798373 236798425 -13889429 + AT_rich Low_complexity Low_complexity 1 52 0 1470 199 109 6 chr2 236798599 236798930 -13888924 + MLT1A1 LTR MaLR 1 365 0 194 364 56 35 chr2 236799371 236799569 -13888285 - L2 LINE L2 -5 3267 3066 1950 143 30 0 chr2 236800300 236800601 -13887253 - AluSx SINE Alu -2 310 1 4888 187 27 15 chr2 236800784 236801956 -13885898 + L1 LINE L1 3800 4985 -1161 326 161 0 43 chr2 236801960 236802053 -13885801 + L1 LINE L1 5221 5309 -837 240 307 91 57 chr2 236802082 236802258 -13885596 - MIR SINE MIR -14 248 67 211 274 60 12 chr2 236805392 236805476 -13882378 + MIR3 SINE MIR 91 178 -30 238 103 26 0 chr2 236805563 236805602 -13882252 + MER103 DNA DNA 48 87 -79 1562 198 19 27 chr2 236807054 236807422 -13880432 + MLT1A1 LTR MaLR 1 365 0 1079 44 22 0 chr2 236808399 236808534 -13879320 - L1PA10 LINE L1 0 6168 6031 652 322 39 4 chr2 236808685 236808918 -13878936 - MIR SINE MIR -2 260 20 1076 253 68 46 chr2 236808975 236809413 -13878441 + MLT1D LTR MaLR 1 448 -57 359 182 0 0 chr2 236809508 236809574 -13878280 + MLT1D LTR MaLR 435 500 -5 430 310 114 18 chr2 236810327 236810721 -13877133 + MLT1J2 LTR MaLR 1 432 -18 2383 85 0 7 chr2 236810749 236811054 -13876800 - AluSg1 SINE Alu -6 303 1 327 333 68 0 chr2 236811915 236812032 -13875822 + MIR SINE MIR 108 232 -30 316 220 184 9 chr2 236812818 236812927 -13874927 - MIR SINE MIR -35 227 100 2355 94 7 3 chr2 236812975 236813284 -13874570 + AluY SINE Alu 1 310 -1 1796 199 17 22 chr2 236813611 236813973 -13873881 + MLT1A1 LTR MaLR 6 365 0 1379 192 53 66 chr2 236814023 236814491 -13873363 + MLT1C LTR MaLR 6 467 0 195 42 0 0 chr2 236814681 236814705 -13873149 + (A)n Simple_repeat Simple_repeat 1 24 0 435 240 213 13 chr2 236814944 236815094 -13872760 + MER5A DNA MER1_type 9 188 -1 396 333 25 25 chr2 236815690 236815852 -13872002 - L2 LINE L2 -201 3071 2910 2197 120 42 33 chr2 236818055 236818414 -13869440 + THE1B LTR MaLR 3 364 0 2022 116 3 0 chr2 236819656 236819962 -13867892 - AluSx SINE Alu 0 307 1 187 329 41 0 chr2 236820383 236820456 -13867398 + MIR3 SINE MIR 127 202 -6 258 56 0 0 chr2 236820564 236820600 -13867254 + (TA)n Simple_repeat Simple_repeat 1 36 0 276 300 0 0 chr2 236820607 236820697 -13867157 + L1MC4 LINE L1 6614 6703 -1339 369 131 0 0 chr2 236820740 236820801 -13867053 + (TG)n Simple_repeat Simple_repeat 2 62 0 382 256 48 56 chr2 236820808 236820933 -13866921 - MIR SINE MIR -123 139 16 1296 179 91 49 chr2 236820970 236821278 -13866576 + MLT2D LTR ERVL 2 322 -92 531 45 0 0 chr2 236821279 236821345 -13866509 + (TC)n Simple_repeat Simple_repeat 1 66 0 292 77 39 0 chr2 236821345 236821397 -13866457 + (CA)n Simple_repeat Simple_repeat 1 54 0 217 221 110 83 chr2 236821539 236821684 -13866170 + L2 LINE L2 2603 2751 -563 217 313 38 25 chr2 236821921 236822001 -13865853 + L2 LINE L2 3106 3186 -86 201 74 0 0 chr2 236822322 236822349 -13865505 + (TTAGGG)n Simple_repeat Simple_repeat 2 28 0 1149 157 11 0 chr2 236822402 236822580 -13865274 + AluJo SINE Alu 1 180 -132 306 225 0 0 chr2 236822580 236822660 -13865194 + A-rich Low_complexity Low_complexity 1 80 0 24 53 0 0 chr2 236823099 236823137 -13864717 + AT_rich Low_complexity Low_complexity 1 38 0 2112 70 0 26 chr2 236823143 236823416 -13864438 + AluY SINE Alu 28 293 -18 2677 107 0 6 chr2 236823604 236823970 -13863884 + THE1B LTR MaLR 1 364 0 601 303 89 102 chr2 236823971 236825301 -13862553 + L2 LINE L2 2014 3309 -4 213 370 12 0 chr2 236825627 236825708 -13862146 + MIR SINE MIR 58 139 -123 230 56 28 0 chr2 236825999 236826035 -13861819 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 207 296 225 7 chr2 236826387 236826529 -13861325 - MIR SINE MIR -50 212 40 1746 227 53 25 chr2 236826844 236827293 -13860561 + MLT2B1 LTR ERVL 1 462 -58 2358 167 16 25 chr2 236827331 236827769 -13860085 - Tigger2a DNA MER2_type 0 434 1 233 86 69 0 chr2 236827771 236827829 -13860025 + (TA)n Simple_repeat Simple_repeat 1 62 0 2106 171 42 27 chr2 236827849 236828299 -13859555 + MSTB2 LTR MaLR 1 457 0 304 106 0 0 chr2 236828317 236828364 -13859490 + MLT2B1 LTR ERVL 469 515 0 336 267 52 26 chr2 236828609 236828725 -13859129 + MIR3 SINE MIR 47 165 -43 839 301 46 18 chr2 236828902 236829231 -13858623 - L2 LINE L2 -1 3312 2975 4421 177 24 7 chr2 236830170 236831125 -13856729 - L1MB7 LINE L1 0 6184 5217 990 264 27 9 chr2 236832259 236832576 -13855278 + MLT1I LTR MaLR 81 450 0 958 259 97 23 chr2 236833994 236834387 -13853467 - MLT1J2 LTR MaLR -2 448 27 207 200 146 0 chr2 236834414 236834469 -13853385 + MIR SINE MIR 102 164 -98 769 220 40 0 chr2 236834742 236834915 -13852939 - MER20 DNA MER1_type 0 219 40 209 200 0 0 chr2 236835021 236835066 -13852788 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 328 309 100 59 chr2 236835849 236835961 -13851893 - MIR SINE MIR -5 257 151 1753 74 35 0 chr2 236835961 236836249 -13851605 + L1MA1 LINE L1 6034 6330 0 328 309 100 59 chr2 236836249 236836354 -13851500 - MIR SINE MIR -111 151 29 1678 61 0 0 chr2 236836410 236836608 -13851246 + AluY SINE Alu 101 298 -13 23 0 0 0 chr2 236837623 236837646 -13850208 + AT_rich Low_complexity Low_complexity 1 23 0 228 359 29 10 chr2 236837693 236837796 -13850058 - L2 LINE L2 -1996 1318 1214 240 253 192 40 chr2 236837816 236837915 -13849939 + L2 LINE L2 3133 3246 -26 1484 175 129 8 chr2 236837979 236838341 -13849513 - MLT1C LTR MaLR -58 407 1 2252 131 0 0 chr2 236838374 236838708 -13849146 - AluSx SINE Alu 0 334 1 716 162 33 149 chr2 236840904 236840959 -13846895 - MER20 DNA MER1_type -3 216 156 1247 32 0 13 chr2 236840959 236841115 -13846739 - L1PA4 LINE L1 -1 6154 6001 716 162 33 149 chr2 236841115 236841300 -13846554 - MER20 DNA MER1_type -63 156 4 2129 113 0 29 chr2 236841409 236841719 -13846135 - AluSg SINE Alu -9 301 1 313 306 59 21 chr2 236841723 236841909 -13845945 - L1ME4a LINE L1 -1 6120 5928 355 333 0 24 chr2 236842142 236842310 -13845544 + GA-rich Low_complexity Low_complexity 3 166 0 634 147 0 0 chr2 236842529 236842638 -13845216 + L1MB5 LINE L1 5854 5962 -212 1280 280 96 50 chr2 236843083 236843648 -13844206 + MLT1E LTR MaLR 3 593 0 1356 0 35 0 chr2 236846158 236846327 -13841527 + (GAAA)n Simple_repeat Simple_repeat 3 177 0 1182 281 89 15 chr2 236847263 236847860 -13839994 + Charlie7 DNA MER1_type 7 647 -1965 23 0 0 0 chr2 236847983 236848006 -13839848 + AT_rich Low_complexity Low_complexity 1 23 0 6837 25 0 0 chr2 236849743 236850534 -13837320 + L1PA3 LINE L1 5362 6152 -3 644 257 134 70 chr2 236850642 236850793 -13837061 + HAL1 LINE L1 1310 1450 -1057 1829 150 92 11 chr2 236850793 236851140 -13836714 + THE1C LTR MaLR 1 375 0 644 257 134 70 chr2 236851140 236851661 -13836193 + HAL1 LINE L1 1450 2025 -482 382 321 75 44 chr2 236851821 236852073 -13835781 + HAL1 LINE L1 2248 2507 0 360 64 0 0 chr2 236852320 236852367 -13835487 + (TA)n Simple_repeat Simple_repeat 2 48 0 1353 51 0 0 chr2 236853229 236853404 -13834450 - L1PA8 LINE L1 -296 5876 5702 2133 64 0 11 chr2 236853404 236853684 -13834170 + L1PA8 LINE L1 5891 6168 -4 243 0 0 0 chr2 236853703 236853730 -13834124 + (TG)n Simple_repeat Simple_repeat 2 28 0 1330 209 98 34 chr2 236853778 236854218 -13833636 + MLT1D LTR MaLR 1 468 -37 21 57 0 0 chr2 236854487 236854522 -13833332 + AT_rich Low_complexity Low_complexity 1 35 0 281 264 73 38 chr2 236854522 236854836 -13833018 - L1ME4a LINE L1 -8 6113 5789 419 240 0 8 chr2 236855856 236855977 -13831877 + GA-rich Low_complexity Low_complexity 3 122 0 30 69 0 0 chr2 236856208 236856266 -13831588 + AT_rich Low_complexity Low_complexity 1 58 0 1883 118 42 7 chr2 236857135 236857466 -13830388 + AluSx SINE Alu 1 341 0 687 299 5 9 chr2 236858468 236858679 -13829175 + MIR SINE MIR 22 231 -31 2551 53 0 0 chr2 236858745 236859047 -13828807 - AluY SINE Alu -9 302 1 301 303 101 42 chr2 236859404 236859523 -13828331 + MER5A DNA MER1_type 63 188 -1 243 297 137 32 chr2 236861331 236861612 -13826242 + L2 LINE L2 2694 3003 -310 215 264 0 0 chr2 236861708 236861761 -13826093 + L2 LINE L2 3261 3313 0 2432 71 0 22 chr2 236862462 236862773 -13825081 + AluY SINE Alu 1 304 -7 207 260 10 83 chr2 236863531 236863627 -13824227 + MIR SINE MIR 17 105 -103 1068 323 50 8 chr2 236863679 236864207 -13823647 + L2 LINE L2 2491 3050 -263 3941 214 66 20 chr2 236864266 236864364 -13823490 + MER45B DNA AcHobo 9 101 -1480 1995 104 0 0 chr2 236864364 236864623 -13823231 + AluSq SINE Alu 40 298 -15 3941 214 66 20 chr2 236864623 236865506 -13822348 + MER45B DNA AcHobo 101 1035 -5 610 234 58 49 chr2 236865523 236865749 -13822105 + L2 LINE L2 3085 3312 -1 2537 96 5 15 chr2 236865965 236866370 -13821484 + L1MA1 LINE L1 5855 6255 -47 1132 249 38 45 chr2 236866457 236866855 -13820999 + MLT2C1 LTR ERVL 3 397 0 223 216 181 69 chr2 236867689 236867805 -13820049 - L2 LINE L2 -4 3268 3140 547 261 48 65 chr2 236868362 236868653 -13819201 + MLT1K LTR MaLR 303 588 0 180 77 0 0 chr2 236870802 236870828 -13817026 + (GA)n Simple_repeat Simple_repeat 1 26 0 372 43 0 0 chr2 236870828 236870874 -13816980 + (TG)n Simple_repeat Simple_repeat 2 47 0 186 43 0 0 chr2 236870913 236870936 -13816918 + (CA)n Simple_repeat Simple_repeat 2 24 0 436 273 78 51 chr2 236871052 236871308 -13816546 + Charlie8 DNA MER1_type 23 285 -2132 305 239 0 0 chr2 236871359 236871430 -13816424 + Charlie8 DNA MER1_type 2347 2417 0 2310 245 71 32 chr2 236871757 236872495 -13815359 + L1ME2 LINE L1 37 814 -5582 1786 129 75 4 chr2 236872495 236872774 -13815080 + AluJo SINE Alu 1 299 -13 2310 245 71 32 chr2 236872774 236872897 -13814957 + L1ME2 LINE L1 814 931 -5465 776 203 23 62 chr2 236872900 236873156 -13814698 + L1ME2 LINE L1 4178 4423 -1792 1131 239 104 21 chr2 236873157 236873626 -13814228 + L1ME2 LINE L1 5724 6231 -2 676 222 46 102 chr2 236873886 236875020 -13812834 + L1MC3 LINE L1 6820 7807 -11 1331 250 102 47 chr2 236875186 236876263 -13811591 - L1MCc LINE L1 -4870 2071 945 571 266 29 55 chr2 236876263 236876575 -13811279 - L1MCc LINE L1 -6042 381 78 255 233 17 0 chr2 236876607 236876667 -13811187 - L1MCc LINE L1 -6338 85 25 494 258 8 8 chr2 236876989 236877109 -13810745 - MIR3 SINE MIR -7 201 82 303 296 92 41 chr2 236877630 236877826 -13810028 + HAL1b LINE L1 1143 1348 0 275 282 56 33 chr2 236878673 236878894 -13808960 + L2 LINE L2 3026 3313 0 1492 154 23 96 chr2 236879478 236879896 -13807958 - MLT1C LTR MaLR -24 443 55 2051 141 0 7 chr2 236879896 236880201 -13807653 - AluSq SINE Alu -1 312 10 1492 154 23 96 chr2 236880201 236880253 -13807601 - MLT1C LTR MaLR -412 55 1 286 312 13 0 chr2 236880728 236880805 -13807049 - L2 LINE L2 -61 3211 3134 663 237 58 81 chr2 236880969 236881277 -13806577 + LTR16C LTR ERVL 160 460 -31 449 169 65 24 chr2 236881706 236881830 -13806024 - MER106A DNA MER1_type 0 236 108 246 269 15 0 chr2 236882019 236882086 -13805768 + MLT1F LTR MaLR 5 72 -483 449 241 81 24 chr2 236882111 236882278 -13805576 + MLT1F LTR MaLR 215 357 -185 432 236 8 63 chr2 236882273 236882400 -13805454 + MLT1F LTR MaLR 476 595 0 * 186 71 0 0 chr2 236883337 236883365 -13804489 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 530 274 35 58 chr2 236884015 236884085 -13803769 + MIR SINE MIR 42 112 -150 2154 144 40 14 chr2 236884085 236884439 -13803415 - THE1B LTR MaLR 0 364 2 530 274 35 58 chr2 236884439 236884594 -13803260 + MIR SINE MIR 112 262 0 255 61 0 0 chr2 236884905 236884938 -13802916 + (CAT)n Simple_repeat Simple_repeat 3 35 0 346 289 66 30 chr2 236884990 236885156 -13802698 - MIR SINE MIR -62 200 29 27 0 0 0 chr2 236885836 236885863 -13801991 + AT_rich Low_complexity Low_complexity 1 27 0 607 262 50 0 chr2 236887661 236887802 -13800052 + MER5A DNA MER1_type 3 150 -39 976 87 0 0 chr2 236887816 236887954 -13799900 - HERVK LTR ERVK -5545 1698 1561 804 93 8 0 chr2 236888196 236888314 -13799540 + LTR5 LTR ERVK 851 969 0 181 355 135 20 chr2 236888364 236888564 -13799290 - L2 LINE L2 -221 3051 2829 2538 141 6 64 chr2 236889062 236889581 -13798273 + L1MC1 LINE L1 5840 6328 -5 942 284 167 6 chr2 236889666 236890151 -13797703 + L2 LINE L2 832 1394 -1920 1470 178 103 23 chr2 236890152 236890540 -13797314 + MLT1C LTR MaLR 2 420 -47 1465 242 19 64 chr2 236890544 236891027 -13796827 + MLT2B1 LTR ERVL 3 463 -57 305 198 10 83 chr2 236891056 236891152 -13796702 - L1MC4 LINE L1 -1340 6702 6614 233 44 0 186 chr2 236891157 236891270 -13796584 + (TA)n Simple_repeat Simple_repeat 2 93 0 351 50 0 195 chr2 236891325 236891546 -13796308 + (TA)n Simple_repeat Simple_repeat 2 179 0 458 56 0 176 chr2 236891642 236892022 -13795832 + (TA)n Simple_repeat Simple_repeat 1 313 0 368 82 5 118 chr2 236892073 236892268 -13795586 + (TA)n Simple_repeat Simple_repeat 1 173 0 263 93 69 84 chr2 236892271 236892341 -13795513 + MLT2B1 LTR ERVL 446 520 0 * 318 157 0 0 chr2 236892341 236892391 -13795463 + MLT1C LTR MaLR 418 467 0 500 293 98 5 chr2 236892393 236892598 -13795256 + L2 LINE L2 1392 1615 -1699 2016 102 47 99 chr2 236892599 236892983 -13794871 - THE1B LTR MaLR 0 364 1 10971 94 53 0 chr2 236892983 236894484 -13793370 - THE1B-int LTR MaLR 0 1580 1 2189 113 51 20 chr2 236894484 236894837 -13793017 - THE1B LTR MaLR 0 364 1 614 244 29 68 chr2 236894837 236895116 -13792738 + L2 LINE L2 1617 1884 -1430 218 272 116 13 chr2 236895293 236895394 -13792460 + MIR3 SINE MIR 79 191 -17 269 327 27 0 chr2 236895502 236895612 -13792242 + GA-rich Low_complexity Low_complexity 4 116 0 2458 73 0 3 chr2 236895633 236895933 -13791921 + AluSq SINE Alu 1 299 -14 340 323 65 24 chr2 236896298 236896422 -13791432 + MER91A DNA MER1_type 1 129 -67 2045 117 0 23 chr2 236896590 236896890 -13790964 + AluSq SINE Alu 1 293 -20 1295 254 63 21 chr2 236896991 236897464 -13790390 - MER113 DNA MER1_type? 0 521 29 499 266 58 31 chr2 236898022 236898248 -13789606 + MER106A DNA MER1_type 1 232 -4 697 189 147 32 chr2 236898255 236898445 -13789409 - MER20 DNA MER1_type -2 217 6 376 250 46 40 chr2 236899817 236899969 -13787885 + MIR SINE MIR 110 262 0 239 381 59 17 chr2 236899997 236900115 -13787739 - MIR3 SINE MIR -50 158 36 1921 276 42 22 chr2 236900186 236900730 -13787124 - MLT1H1 LTR MaLR 0 555 1 201 143 0 0 chr2 236900843 236900878 -13786976 + (TG)n Simple_repeat Simple_repeat 1 35 0 24 77 0 0 chr2 236900895 236900947 -13786907 + AT_rich Low_complexity Low_complexity 1 52 0 223 242 15 15 chr2 236901996 236902062 -13785792 + (TA)n Simple_repeat Simple_repeat 1 66 0 350 264 148 71 chr2 236902110 236902447 -13785407 - L1MC4a LINE L1 -1406 6402 6040 496 216 7 7 chr2 236902512 236902651 -13785203 + (CATA)n Simple_repeat Simple_repeat 2 140 0 306 289 58 0 chr2 236902891 236903012 -13784842 - L1MC4a LINE L1 -2025 5783 5656 430 323 43 18 chr2 236903840 236904004 -13783850 + MIR SINE MIR 21 188 -74 1547 292 103 71 chr2 236905555 236906686 -13781168 + L2 LINE L2 2153 3302 -11 23 0 0 0 chr2 236906893 236906916 -13780938 + AT_rich Low_complexity Low_complexity 1 23 0 490 270 44 29 chr2 236907757 236907894 -13779960 - MIR SINE MIR -3 259 121 1078 187 150 41 chr2 236910371 236910665 -13777189 + MER2 DNA MER2_type 20 345 0 4268 198 117 13 chr2 236910723 236911706 -13776148 + MER52A LTR ERV1 1 1196 -559 367 182 0 0 chr2 236911698 236911764 -13776090 + MER52A LTR ERV1 1684 1749 -6 * 1302 262 95 58 chr2 236911941 236912244 -13775610 - L1MCc LINE L1 -3218 3723 3433 1857 157 0 0 chr2 236912244 236912511 -13775343 - AluSx SINE Alu -45 267 1 1302 262 95 58 chr2 236912511 236912802 -13775052 - L1MCc LINE L1 -3508 3433 3154 456 101 0 0 chr2 236912802 236912871 -13774983 - L1MA3 LINE L1 0 6305 6237 1302 262 95 58 chr2 236912871 236913876 -13773978 - L1MCc LINE L1 -3787 3154 2076 377 247 65 95 chr2 236913897 236914312 -13773542 - L1MCc LINE L1 -4897 1526 1261 395 52 17 0 chr2 236915101 236915159 -13772695 + (TA)n Simple_repeat Simple_repeat 1 59 0 1876 167 25 52 chr2 236915740 236916141 -13771713 + MLT1B LTR MaLR 1 390 0 448 230 47 115 chr2 236916661 236917133 -13770721 - L1MC5 LINE L1 -399 7562 7040 862 247 39 82 chr2 236917232 236917788 -13770066 - L1MC5 LINE L1 -870 7091 6558 315 0 0 0 chr2 236917892 236917927 -13769927 + (TG)n Simple_repeat Simple_repeat 2 36 0 238 349 163 0 chr2 236918290 236918542 -13769312 - L2 LINE L2 -2331 983 691 2305 100 0 3 chr2 236918722 236919031 -13768823 - AluSc SINE Alu -1 308 1 186 71 0 0 chr2 236919798 236919826 -13768028 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 30 0 0 0 chr2 236921080 236921110 -13766744 + AT_rich Low_complexity Low_complexity 1 30 0 349 284 83 105 chr2 236921800 236922208 -13765646 - MLT1J LTR MaLR -5 506 108 343 278 66 40 chr2 236922311 236922462 -13765392 - MIR SINE MIR -74 188 34 470 301 64 0 chr2 236922681 236922837 -13765017 + L2 LINE L2 2172 2337 -977 1149 276 58 25 chr2 236922869 236923305 -13764549 + L2 LINE L2 2551 3000 -313 521 322 40 5 chr2 236923319 236923518 -13764336 + L2 LINE L2 3108 3313 0 23 0 0 0 chr2 236923775 236923798 -13764056 + AT_rich Low_complexity Low_complexity 1 23 0 199 298 24 81 chr2 236923899 236923927 -13763927 - L2 LINE L2 -3 3269 3241 1226 181 32 129 chr2 236923927 236923986 -13763868 - MLT1A1 LTR MaLR 0 365 302 1985 146 7 0 chr2 236923986 236924281 -13763573 + AluSx SINE Alu 1 297 -15 1226 181 32 129 chr2 236924281 236924625 -13763229 - MLT1A1 LTR MaLR -63 302 1 199 298 24 81 chr2 236924625 236924720 -13763134 - L2 LINE L2 -31 3241 3153 750 276 43 82 chr2 236924896 236925470 -13762384 + L1ME2 LINE L1 5579 6164 0 73 32 0 0 chr2 236925656 236925750 -13762104 + AT_rich Low_complexity Low_complexity 1 94 0 276 321 34 16 chr2 236925753 236925951 -13761903 - MIR SINE MIR -93 169 4 393 313 108 19 chr2 236927611 236927825 -13760029 + HAL1b LINE L1 380 612 -736 265 194 0 65 chr2 236927931 236927993 -13759861 - MIR SINE MIR 0 262 205 282 204 307 0 chr2 236928010 236928098 -13759756 + MIR SINE MIR 134 248 -14 21 57 0 0 chr2 236928350 236928385 -13759469 + AT_rich Low_complexity Low_complexity 1 35 0 341 314 57 60 chr2 236928609 236928978 -13758876 + L1MC4a LINE L1 2133 2500 -3646 234 219 59 42 chr2 236929029 236929148 -13758706 + L1MC4a LINE L1 2593 2713 -3433 611 198 147 38 chr2 236929335 236929492 -13758362 - MER58A DNA MER1_type -2 222 49 27 0 0 0 chr2 236929492 236929519 -13758335 + AT_rich Low_complexity Low_complexity 1 27 0 432 280 83 15 chr2 236929539 236929803 -13758051 + L1MC4a LINE L1 3588 3869 -2277 22 0 0 0 chr2 236929936 236929958 -13757896 + AT_rich Low_complexity Low_complexity 1 22 0 282 256 16 31 chr2 236929967 236930112 -13757742 + L1MC4a LINE L1 4150 4292 -1854 2071 159 55 38 chr2 236930152 236930370 -13757484 - MSTA LTR MaLR 0 428 215 2311 99 3 0 chr2 236930370 236930682 -13757172 - AluSp SINE Alu 0 313 1 2071 159 55 38 chr2 236930682 236930884 -13756970 - MSTA LTR MaLR -213 215 1 24 0 0 0 chr2 236931694 236931718 -13756136 + AT_rich Low_complexity Low_complexity 1 24 0 394 239 69 54 chr2 236931790 236931920 -13755934 - L1MDa LINE L1 -4026 2514 2383 243 189 0 19 chr2 236931969 236932022 -13755832 + L1MC4a LINE L1 5351 5402 -2406 242 217 0 0 chr2 236932021 236932090 -13755764 - L1MEc LINE L1 -2982 3098 3030 * 1016 283 72 43 chr2 236932078 236932856 -13754998 - L1MEc LINE L1 -3510 2570 1819 991 268 21 60 chr2 236932859 236933559 -13754295 - L1MEc LINE L1 -5257 813 2 323 340 67 56 chr2 236933590 236933964 -13753890 + L1MC4a LINE L1 5422 5799 -322 440 311 136 4 chr2 236933978 236934206 -13753648 - MIR SINE MIR -4 258 1 281 289 31 0 chr2 236934238 236934335 -13753519 + L1MC4a LINE L1 5817 5916 -1892 221 380 107 7 chr2 236936256 236936406 -13751448 - MIR3 SINE MIR -1 207 43 3737 71 6 0 chr2 236936406 236936897 -13750957 - L1PA13 LINE L1 -1 6162 5669 271 385 101 14 chr2 236937463 236937681 -13750173 + MIR SINE MIR 14 250 -12 211 51 0 51 chr2 236937732 236937771 -13750083 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 365 333 12 108 chr2 236938015 236938264 -13749590 + L2 LINE L2 3048 3272 0 380 355 12 0 chr2 236938723 236938895 -13748959 + MIR SINE MIR 89 262 0 2843 7 0 0 chr2 236939079 236939388 -13748466 - AluYa5 SINE Alu -2 309 1 2102 121 43 32 chr2 236941663 236942034 -13745820 + THE1C LTR MaLR 1 375 0 212 59 29 0 chr2 236944692 236944726 -13743128 + (TTATA)n Simple_repeat Simple_repeat 4 38 0 718 313 106 50 chr2 236945072 236945554 -13742300 - L2 LINE L2 -1 3312 2804 4083 197 29 14 chr2 236946751 236947816 -13740038 + L1MB8 LINE L1 5088 6169 -9 253 196 124 62 chr2 236948811 236948908 -13738946 + MER5A DNA MER1_type 8 110 -79 1913 160 0 16 chr2 236951408 236951720 -13736134 - AluJo SINE Alu -1 311 5 4384 162 17 15 chr2 236951819 236952506 -13735348 + L1MA8 LINE L1 5090 5774 -517 2241 123 0 0 chr2 236952506 236952808 -13735046 + AluSq SINE Alu 1 302 -11 4384 162 17 15 chr2 236952808 236952936 -13734918 + L1MA8 LINE L1 5774 5900 -391 2435 101 8 6 chr2 236952936 236953290 -13734564 + L1PA8 LINE L1 5814 6172 0 4384 162 17 15 chr2 236953290 236953472 -13734382 + L1MA8 LINE L1 5900 6090 -201 6493 86 8 13 chr2 236953482 236955236 -13732618 - L1PA10 LINE L1 -4 6164 4417 3879 122 16 7 chr2 236955236 236955837 -13732017 + L1PA10 LINE L1 3788 4395 -1746 925 148 32 56 chr2 236955837 236955932 -13731922 + L1MA8 LINE L1 6078 6174 -117 2094 137 22 33 chr2 236955932 236956298 -13731556 + THE1B LTR MaLR 1 362 -2 925 148 32 56 chr2 236956298 236956418 -13731436 + L1MA8 LINE L1 6174 6288 -3 1594 188 111 6 chr2 236956660 236957012 -13730842 + MLT1B LTR MaLR 2 390 0 384 300 70 53 chr2 236957701 236957928 -13729926 - MIR SINE MIR -30 232 2 2263 148 28 3 chr2 236959418 236959782 -13728072 - THE1C LTR MaLR -2 373 1 3009 323 54 38 chr2 236960296 236961859 -13725995 + ERVL LTR ERVL 753 2341 -3423 1582 299 35 30 chr2 236962072 236962665 -13725189 + ERVL LTR ERVL 2635 3230 -2534 258 303 83 0 chr2 236962667 236962776 -13725078 - HAL1 LINE L1 -2380 127 10 314 371 48 21 chr2 236963017 236963203 -13724651 + MIR SINE MIR 18 208 -54 24 32 0 0 chr2 236963694 236963725 -13724129 + AT_rich Low_complexity Low_complexity 1 31 0 724 315 72 15 chr2 236964212 236964458 -13723396 + LTR16A LTR ERVL 99 370 -80 2208 138 117 5 chr2 236964458 236964843 -13723011 + MSTA LTR MaLR 1 428 0 724 315 72 15 chr2 236964843 236964929 -13722925 + LTR16A LTR ERVL 370 450 0 1405 215 106 9 chr2 236966284 236966708 -13721146 + L1MB8 LINE L1 5713 6177 -1 1770 123 35 63 chr2 236967325 236967643 -13720211 - MER1B DNA MER1_type 0 339 31 189 107 0 0 chr2 236967683 236967711 -13720143 + (TC)n Simple_repeat Simple_repeat 1 28 0 2650 113 3 0 chr2 236967925 236968298 -13719556 + THE1C LTR MaLR 1 374 -1 39 74 0 0 chr2 236968330 236968411 -13719443 + AT_rich Low_complexity Low_complexity 1 81 0 1895 287 87 39 chr2 236968656 236969447 -13718407 + L2 LINE L2 1355 2183 -1131 1270 208 0 4 chr2 236969493 236969734 -13718120 - AluJo SINE Alu -57 255 16 607 235 207 10 chr2 236969751 236970269 -13717585 + LTR50 LTR ERVL 46 788 -7 1544 272 78 49 chr2 236970276 236971004 -13716850 + L2 LINE L2 2182 3031 -282 1769 158 53 73 chr2 236971004 236971402 -13716452 + MLT1B LTR MaLR 1 390 0 1544 272 78 49 chr2 236971402 236971416 -13716438 + L2 LINE L2 3031 3043 -270 991 202 25 10 chr2 236971475 236971673 -13716181 + MLT1B LTR MaLR 189 389 -1 221 229 37 101 chr2 236971675 236971784 -13716070 + L2 LINE L2 3028 3129 -184 849 244 160 23 chr2 236971839 236972222 -13715632 - MLT1J2 LTR MaLR -1 445 18 577 274 7 7 chr2 236972255 236972401 -13715453 + L2 LINE L2 3168 3313 0 268 291 94 0 chr2 236972754 236972881 -13714973 - MIR SINE MIR -6 256 118 448 293 126 73 chr2 236972938 236973460 -13714394 - L1M4 LINE L1 -1720 4426 3877 702 301 32 5 chr2 236973502 236973718 -13714136 + MLT1L LTR MaLR 45 266 -349 274 339 110 17 chr2 236973954 236974255 -13713599 - L1M4 LINE L1 -2298 3848 3520 15241 97 9 1 chr2 236975294 236978249 -13709605 - L1PA7 LINE L1 0 6154 3166 2631 248 38 15 chr2 236978250 236979123 -13708731 + L1M3e LINE L1 911 1788 -4596 665 123 78 0 chr2 236979126 236979243 -13708611 + L1M3 LINE L1 5681 5806 -485 2295 188 14 62 chr2 236979355 236979952 -13707902 + L1MA10 LINE L1 5762 6334 0 23 0 0 0 chr2 236981777 236981800 -13706054 + AT_rich Low_complexity Low_complexity 1 23 0 508 255 55 28 chr2 236982787 236982932 -13704922 + MIR SINE MIR 10 158 -104 562 281 257 3 chr2 236982962 236983293 -13704561 + L2 LINE L2 2899 3313 0 547 252 51 73 chr2 236983887 236984121 -13703733 - MIR SINE MIR -12 250 22 703 342 36 0 chr2 236986834 236987056 -13700798 - MIR SINE MIR -20 242 13 258 316 251 10 chr2 236987193 236987484 -13700370 - L2 LINE L2 -117 3196 2836 * 674 335 113 27 chr2 236987479 236987965 -13699889 - L2 LINE L2 -383 2931 2404 22 0 0 0 chr2 236988062 236988084 -13699770 + AT_rich Low_complexity Low_complexity 1 22 0 1313 120 31 0 chr2 236988158 236988349 -13699505 + AluSg/x SINE Alu 113 309 -1 192 125 0 0 chr2 236988558 236988590 -13699264 + (CA)n Simple_repeat Simple_repeat 1 32 0 2225 103 0 0 chr2 236989139 236989465 -13698389 - AluSg SINE Alu 0 326 1 879 240 125 64 chr2 236990561 236990944 -13696910 - MLT1G LTR MaLR -85 505 106 241 287 84 30 chr2 236990989 236991121 -13696733 - MLT1G LTR MaLR -400 149 14 14391 29 0 1 chr2 236991306 236993809 -13694045 + L1PA4 LINE L1 3638 6154 -1 21 0 0 0 chr2 236993950 236993971 -13693883 + AT_rich Low_complexity Low_complexity 1 21 0 575 284 47 87 chr2 236995860 236996181 -13691673 - L2 LINE L2 0 3313 3006 2822 226 67 3 chr2 236996199 236996916 -13690938 + L1MB8 LINE L1 5379 6141 -37 1001 308 189 14 chr2 236997006 236997588 -13690266 - L2 LINE L2 -343 2971 2288 2133 112 21 3 chr2 236997673 236997960 -13689894 + AluSx SINE Alu 1 292 -20 211 306 41 61 chr2 236998174 236998272 -13689582 - MIR SINE MIR -130 132 37 383 297 92 31 chr2 237000134 237000363 -13687491 + L2 LINE L2 2914 3156 -157 185 333 104 0 chr2 237001512 237001608 -13686246 + L2 LINE L2 2650 2755 -559 304 234 42 38 chr2 237002648 237002848 -13685006 + MLT1K LTR MaLR 356 586 -2 335 239 182 31 chr2 237002950 237003109 -13684745 - MIR SINE MIR -24 238 56 327 241 43 78 chr2 237003334 237003475 -13684379 + MIR SINE MIR 113 248 -14 225 0 0 0 chr2 237004688 237004713 -13683141 + (A)n Simple_repeat Simple_repeat 1 25 0 200 233 117 0 chr2 237004723 237004783 -13683071 + MIR SINE MIR 153 219 -43 29 0 0 0 chr2 237004821 237004850 -13683004 + AT_rich Low_complexity Low_complexity 1 29 0 206 318 9 18 chr2 237004851 237004961 -13682893 + (TAAA)n Simple_repeat Simple_repeat 4 112 0 228 318 16 40 chr2 237004981 237005107 -13682747 - MIR SINE MIR -21 241 119 2267 129 28 8 chr2 237005429 237005786 -13682068 - THE1B LTR MaLR 0 364 1 29 47 0 0 chr2 237006135 237006178 -13681676 + AT_rich Low_complexity Low_complexity 1 43 0 1045 197 184 51 chr2 237007882 237008070 -13679784 + MLT1C LTR MaLR 1 163 -304 444 51 0 0 chr2 237008070 237008129 -13679725 + (CA)n Simple_repeat Simple_repeat 2 60 0 1045 197 184 51 chr2 237008129 237008352 -13679502 + MLT1C LTR MaLR 163 467 0 237 220 83 83 chr2 237010650 237010782 -13677072 - L1ME LINE L1 -216 5905 5774 519 260 140 50 chr2 237010900 237011100 -13676754 - MIR SINE MIR -42 220 3 2141 124 0 0 chr2 237012079 237012391 -13675463 - AluSx SINE Alu 0 312 1 26 0 0 0 chr2 237012424 237012450 -13675404 + AT_rich Low_complexity Low_complexity 1 26 0 2146 133 38 16 chr2 237012600 237012967 -13674887 + THE1C LTR MaLR 1 375 0 1873 208 76 38 chr2 237013036 237013564 -13674290 + MLT1F1 LTR MaLR 12 559 -8 625 324 77 51 chr2 237013677 237014329 -13673525 - L1M4 LINE L1 -3342 2804 2136 26 30 0 0 chr2 237014889 237014922 -13672932 + AT_rich Low_complexity Low_complexity 1 33 0 362 342 7 26 chr2 237014923 237015075 -13672779 + L2 LINE L2 1313 1461 -1853 32 0 0 0 chr2 237015406 237015438 -13672416 + AT_rich Low_complexity Low_complexity 1 32 0 694 204 25 88 chr2 237015441 237015759 -13672095 + L1MC5 LINE L1 7611 7908 -53 1462 104 0 46 chr2 237017459 237017699 -13670155 - L1PB1 LINE L1 0 6151 5923 3908 149 34 56 chr2 237018086 237018929 -13668925 + L1MC3 LINE L1 6961 7785 0 595 186 9 35 chr2 237019397 237019510 -13668344 + FAM SINE Alu 48 157 -28 201 74 0 0 chr2 237019512 237019539 -13668315 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2018 130 3 3 chr2 237019699 237019998 -13667856 + AluSx SINE Alu 1 299 -13 1635 129 30 0 chr2 237020004 237020267 -13667587 - L1PB1 LINE L1 -461 5705 5435 2015 135 78 8 chr2 237020267 237020633 -13667221 + L1PA16 LINE L1 5762 6157 -9 2390 98 0 0 chr2 237020816 237021122 -13666732 + AluSg SINE Alu 5 310 0 22 35 0 0 chr2 237021124 237021153 -13666701 + AT_rich Low_complexity Low_complexity 1 29 0 1365 246 54 54 chr2 237021538 237021766 -13666088 - L1MC4 LINE L1 -7 8035 7808 1802 203 0 0 chr2 237021766 237022072 -13665782 - AluJb SINE Alu -6 306 1 1365 246 54 54 chr2 237022072 237022529 -13665325 - L1MC4 LINE L1 -233 7809 7350 400 263 98 75 chr2 237022954 237023312 -13664542 - HAL1b LINE L1 -706 642 277 1012 261 112 69 chr2 237023380 237023450 -13664404 - L1ME LINE L1 -4673 1407 1341 2512 101 46 0 chr2 237023450 237023798 -13664056 + THE1B LTR MaLR 1 364 0 1012 261 112 69 chr2 237023798 237024668 -13663186 - L1ME LINE L1 -4739 1341 400 250 132 0 0 chr2 237024668 237024706 -13663148 - tRNA-Phe-TTC tRNA tRNA -38 38 1 1012 261 112 69 chr2 237024706 237025119 -13662735 - L1ME LINE L1 -5680 400 6 26 0 0 0 chr2 237025276 237025302 -13662552 + AT_rich Low_complexity Low_complexity 1 26 0 282 332 112 5 chr2 237026269 237026465 -13661389 - ERVL LTR ERVL -3528 2236 2020 1553 114 0 17 chr2 237027010 237027246 -13660608 + L1PA8 LINE L1 5941 6172 0 293 189 54 14 chr2 237028524 237028598 -13659256 - LTR67 LTR ERVL -8 549 473 420 299 27 20 chr2 237029716 237029863 -13657991 - MIR SINE MIR -114 148 1 252 287 155 23 chr2 237030000 237030129 -13657725 - L3b LINE CR1 -229 1354 1209 205 186 23 0 chr2 237030281 237030324 -13657530 + (TG)n Simple_repeat Simple_repeat 2 45 0 2202 130 10 0 chr2 237030577 237030885 -13656969 + AluSx SINE Alu 1 311 -1 226 222 0 0 chr2 237033041 237033095 -13654759 + CT-rich Low_complexity Low_complexity 1 54 0 580 221 31 0 chr2 237033164 237033291 -13654563 + L1PA15 LINE L1 3533 3663 -2483 7789 186 13 14 chr2 237033343 237035855 -13651999 + L1PA15 LINE L1 3646 6165 0 1334 196 102 29 chr2 237035944 237036219 -13651635 - AluJo SINE Alu -17 295 1 7221 177 17 107 chr2 237036240 237038168 -13649686 - MER52A LTR ERV1 0 1755 1 225 170 21 0 chr2 237038578 237038625 -13649229 + Charlie4 DNA MER1_type 1879 1926 -35 1127 250 8 11 chr2 237038734 237038994 -13648860 + MER45C DNA AcHobo 1 259 -694 22 0 0 0 chr2 237039243 237039265 -13648589 + AT_rich Low_complexity Low_complexity 1 22 0 228 250 0 0 chr2 237039265 237039317 -13648537 - L1MC3 LINE L1 -44 7741 7690 793 251 32 76 chr2 237041757 237042008 -13645846 - MIR SINE MIR -10 252 13 3108 198 73 10 chr2 237042021 237042899 -13644955 - Charlie1a DNA MER1_type -9 1446 514 1797 152 35 43 chr2 237042899 237043275 -13644579 + THE1C LTR MaLR 1 373 -2 8537 155 12 41 chr2 237043280 237043630 -13644224 + THE1B-int LTR MaLR 4 363 -1217 2131 131 33 25 chr2 237043630 237043989 -13643865 + THE1B LTR MaLR 3 364 0 8537 155 12 41 chr2 237043989 237045263 -13642591 + THE1B-int LTR MaLR 363 1580 0 1669 161 72 31 chr2 237045263 237045623 -13642231 + THE1C LTR MaLR 1 375 0 569 227 20 27 chr2 237045682 237045832 -13642022 - Charlie1a DNA MER1_type -1032 423 275 870 205 0 6 chr2 237045833 237045989 -13641865 + AluJb SINE Alu 135 289 -23 298 113 50 12 chr2 237045990 237046070 -13641784 + (TA)n Simple_repeat Simple_repeat 1 83 0 1039 233 12 4 chr2 237046105 237046345 -13641509 - Charlie1a DNA MER1_type -1207 248 7 21 0 0 0 chr2 237046402 237046423 -13641431 + AT_rich Low_complexity Low_complexity 1 21 0 1448 213 27 9 chr2 237046472 237046800 -13641054 + MLT1A2 LTR MaLR 9 342 -32 2925 198 43 143 chr2 237046800 237048150 -13639704 - MLT1A2-int LTR MaLR -155 1216 2 1279 244 49 35 chr2 237048151 237048520 -13639334 - MLT1A2 LTR MaLR 0 374 1 222 193 35 18 chr2 237048563 237048620 -13639234 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 302 316 60 12 chr2 237049257 237049425 -13638429 + L1M4 LINE L1 4906 5081 -1065 305 283 215 0 chr2 237049434 237049611 -13638243 - LTR33 LTR ERVL -306 215 1 1911 200 53 27 chr2 237049622 237050071 -13637783 + MLT1C LTR MaLR 7 467 0 433 165 122 9 chr2 237050255 237050370 -13637484 - MER69 DNA AcHobo -2380 146 19 23 33 0 0 chr2 237050383 237050413 -13637441 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr2 237050516 237050551 -13637303 + AT_rich Low_complexity Low_complexity 1 35 0 844 233 47 0 chr2 237051478 237051650 -13636204 - MER5A DNA MER1_type -9 180 1 198 103 0 0 chr2 237052685 237052714 -13635140 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 682 300 76 5 chr2 237053090 237053313 -13634541 + MIR SINE MIR 24 262 0 289 298 21 64 chr2 237053401 237053542 -13634312 - MIR3 SINE MIR -9 199 65 273 286 133 19 chr2 237053680 237053785 -13634069 + MIR3 SINE MIR 86 202 -6 231 265 15 15 chr2 237054204 237054272 -13633582 - L2 LINE L2 0 3272 3205 185 308 135 10 chr2 237054491 237054595 -13633259 - L2 LINE L2 -348 2965 2849 24 32 0 0 chr2 237055116 237055147 -13632707 + AT_rich Low_complexity Low_complexity 1 31 0 205 251 171 31 chr2 237055972 237056081 -13631773 + MIR SINE MIR 37 162 -65 468 274 37 12 chr2 237056371 237056535 -13631319 + MIR SINE MIR 85 252 -10 202 384 96 9 chr2 237056964 237057183 -13630671 + MIR SINE MIR 25 262 0 1628 166 67 70 chr2 237058647 237059064 -13628790 + MLT1C LTR MaLR 1 416 -51 975 189 16 11 chr2 237059070 237059260 -13628594 - AluSg/x SINE Alu -1 311 121 268 189 0 0 chr2 237059260 237059313 -13628541 + MLT1C LTR MaLR 415 467 0 183 298 18 0 chr2 237059348 237059405 -13628449 - L2 LINE L2 -1 3271 3214 647 243 178 4 chr2 237059452 237059728 -13628126 + MER33 DNA MER1_type 1 324 0 591 289 24 0 chr2 237059964 237060130 -13627724 - MIR SINE MIR -12 250 81 32 0 0 23 chr2 237060181 237060195 -13627659 + AT_rich Low_complexity Low_complexity 1 14 -28 712 189 0 0 chr2 237060195 237060317 -13627537 + FLAM_C SINE Alu 2 123 -10 32 0 0 23 chr2 237060317 237060345 -13627509 + AT_rich Low_complexity Low_complexity 14 42 0 2021 94 65 0 chr2 237060433 237060709 -13627145 - AluSp SINE Alu -19 294 1 219 326 21 32 chr2 237061569 237061664 -13626190 + MIR SINE MIR 47 140 -68 1790 191 3 0 chr2 237063173 237063482 -13624372 + AluJb SINE Alu 1 310 -2 3815 141 19 1 chr2 237063494 237064170 -13623684 - L1MA8 LINE L1 -181 6110 5423 853 138 48 0 chr2 237064173 237064340 -13623514 + L1MA8 LINE L1 6115 6289 -2 1454 194 0 4 chr2 237064616 237064868 -13622986 + AluJb SINE Alu 41 291 -21 271 192 27 0 chr2 237064871 237064944 -13622910 + (TATATG)n Simple_repeat Simple_repeat 6 80 0 7206 30 3 0 chr2 237065646 237066569 -13621285 + L1PA4 LINE L1 5294 6219 0 230 320 30 39 chr2 237067057 237067260 -13620594 - L2 LINE L2 -12 3301 3101 346 254 105 40 chr2 237067584 237067776 -13620078 + MIR3 SINE MIR 10 212 -27 180 152 0 0 chr2 237068129 237068162 -13619692 + T-rich Low_complexity Low_complexity 1 33 0 206 295 0 0 chr2 237068955 237069016 -13618838 + (CA)n Simple_repeat Simple_repeat 1 61 0 1584 141 30 20 chr2 237072938 237073236 -13614618 - Tigger4(Zombi) DNA MER2_type 0 2731 2431 489 259 3 1 chr2 237073257 237073435 -13614419 + L1M4 LINE L1 5154 5332 -814 965 125 30 18 chr2 237073435 237073603 -13614251 + L1PA16 LINE L1 5750 5919 -247 448 233 17 17 chr2 237123770 237123890 -13563964 - MLT1J2 LTR MaLR -304 146 27 207 200 146 0 chr2 237123917 237123972 -13563882 + MIR SINE MIR 102 164 -98 769 220 40 0 chr2 237124245 237124418 -13563436 - MER20 DNA MER1_type 0 219 40 209 200 0 0 chr2 237124524 237124569 -13563285 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 328 309 100 59 chr2 237125352 237125464 -13562390 - MIR SINE MIR -5 257 151 1753 74 35 0 chr2 237125464 237125752 -13562102 + L1MA1 LINE L1 6034 6330 0 328 309 100 59 chr2 237125752 237125857 -13561997 - MIR SINE MIR -111 151 29 1678 61 0 0 chr2 237125913 237126111 -13561743 + AluY SINE Alu 101 298 -13 23 0 0 0 chr2 237127126 237127149 -13560705 + AT_rich Low_complexity Low_complexity 1 23 0 228 359 29 10 chr2 237127196 237127299 -13560555 - L2 LINE L2 -1996 1318 1214 240 253 192 40 chr2 237127319 237127418 -13560436 + L2 LINE L2 3133 3246 -26 1484 175 129 8 chr2 237127482 237127844 -13560010 - MLT1C LTR MaLR -58 407 1 2252 131 0 0 chr2 237127877 237128211 -13559643 - AluSx SINE Alu 0 334 1 716 162 33 149 chr2 237130407 237130462 -13557392 - MER20 DNA MER1_type -3 216 156 1247 32 0 13 chr2 237130462 237130618 -13557236 - L1PA4 LINE L1 -1 6154 6001 716 162 33 149 chr2 237130618 237130803 -13557051 - MER20 DNA MER1_type -63 156 4 2129 113 0 29 chr2 237130912 237131222 -13556632 - AluSg SINE Alu -9 301 1 313 306 59 21 chr2 237131226 237131412 -13556442 - L1ME4a LINE L1 -1 6120 5928 355 333 0 24 chr2 237131645 237131813 -13556041 + GA-rich Low_complexity Low_complexity 3 166 0 634 147 0 0 chr2 237132032 237132141 -13555713 + L1MB5 LINE L1 5854 5962 -212 1280 280 96 50 chr2 237132586 237133151 -13554703 + MLT1E LTR MaLR 3 593 0 1356 0 35 0 chr2 237135661 237135830 -13552024 + (GAAA)n Simple_repeat Simple_repeat 3 177 0 1182 281 89 15 chr2 237136766 237137363 -13550491 + Charlie7 DNA MER1_type 7 647 -1965 23 0 0 0 chr2 237137486 237137509 -13550345 + AT_rich Low_complexity Low_complexity 1 23 0 6837 25 0 0 chr2 237139246 237140037 -13547817 + L1PA3 LINE L1 5362 6152 -3 644 257 134 70 chr2 237140145 237140296 -13547558 + HAL1 LINE L1 1310 1450 -1057 1829 150 92 11 chr2 237140296 237140643 -13547211 + THE1C LTR MaLR 1 375 0 644 257 134 70 chr2 237140643 237141164 -13546690 + HAL1 LINE L1 1450 2025 -482 382 321 75 44 chr2 237141324 237141576 -13546278 + HAL1 LINE L1 2248 2507 0 360 64 0 0 chr2 237141823 237141870 -13545984 + (TA)n Simple_repeat Simple_repeat 1 47 0 1353 51 0 0 chr2 237142732 237142907 -13544947 - L1PA8 LINE L1 -296 5876 5702 2133 64 0 11 chr2 237142907 237143187 -13544667 + L1PA8 LINE L1 5891 6168 -4 243 0 0 0 chr2 237143206 237143233 -13544621 + (TG)n Simple_repeat Simple_repeat 2 28 0 1330 209 98 34 chr2 237143281 237143721 -13544133 + MLT1D LTR MaLR 1 468 -37 21 57 0 0 chr2 237143990 237144025 -13543829 + AT_rich Low_complexity Low_complexity 1 35 0 281 264 73 38 chr2 237144025 237144339 -13543515 - L1ME4a LINE L1 -8 6113 5789 419 240 0 8 chr2 237145359 237145480 -13542374 + GA-rich Low_complexity Low_complexity 3 122 0 30 69 0 0 chr2 237145711 237145769 -13542085 + AT_rich Low_complexity Low_complexity 1 58 0 1883 118 42 7 chr2 237146638 237146969 -13540885 + AluSx SINE Alu 1 341 0 687 299 5 9 chr2 237147971 237148182 -13539672 + MIR SINE MIR 22 231 -31 2551 53 0 0 chr2 237148248 237148550 -13539304 - AluY SINE Alu -9 302 1 301 303 101 42 chr2 237148907 237149026 -13538828 + MER5A DNA MER1_type 63 188 -1 243 297 137 32 chr2 237150834 237151115 -13536739 + L2 LINE L2 2694 3003 -310 215 264 0 0 chr2 237151211 237151264 -13536590 + L2 LINE L2 3261 3313 0 2432 71 0 22 chr2 237151965 237152276 -13535578 + AluY SINE Alu 1 304 -7 207 260 10 83 chr2 237153034 237153130 -13534724 + MIR SINE MIR 17 105 -103 1068 323 50 8 chr2 237153182 237153710 -13534144 + L2 LINE L2 2491 3050 -263 3941 214 66 20 chr2 237153769 237153867 -13533987 + MER45B DNA AcHobo 9 101 -1480 1995 104 0 0 chr2 237153867 237154126 -13533728 + AluSq SINE Alu 40 298 -15 3941 214 66 20 chr2 237154126 237155009 -13532845 + MER45B DNA AcHobo 101 1035 -5 610 234 58 49 chr2 237155026 237155252 -13532602 + L2 LINE L2 3085 3312 -1 2537 96 5 15 chr2 237155468 237155873 -13531981 + L1MA1 LINE L1 5855 6255 -47 1132 249 38 45 chr2 237155960 237156358 -13531496 + MLT2C1 LTR ERVL 3 397 0 223 216 181 69 chr2 237157192 237157308 -13530546 - L2 LINE L2 -4 3268 3140 547 261 48 65 chr2 237157865 237158156 -13529698 + MLT1K LTR MaLR 303 588 0 180 77 0 0 chr2 237160305 237160331 -13527523 + (GA)n Simple_repeat Simple_repeat 1 26 0 372 43 0 0 chr2 237160331 237160377 -13527477 + (TG)n Simple_repeat Simple_repeat 2 47 0 186 43 0 0 chr2 237160416 237160439 -13527415 + (CA)n Simple_repeat Simple_repeat 2 24 0 436 273 78 51 chr2 237160555 237160811 -13527043 + Charlie8 DNA MER1_type 23 285 -2132 305 239 0 0 chr2 237160862 237160933 -13526921 + Charlie8 DNA MER1_type 2347 2417 0 2310 245 71 32 chr2 237161260 237161998 -13525856 + L1ME2 LINE L1 37 814 -5582 1786 129 75 4 chr2 237161998 237162277 -13525577 + AluJo SINE Alu 1 299 -13 2310 245 71 32 chr2 237162277 237162400 -13525454 + L1ME2 LINE L1 814 931 -5465 776 203 23 62 chr2 237162403 237162659 -13525195 + L1ME2 LINE L1 4178 4423 -1792 1131 239 104 21 chr2 237162660 237163129 -13524725 + L1ME2 LINE L1 5724 6231 -2 676 222 46 102 chr2 237163389 237164523 -13523331 + L1MC3 LINE L1 6820 7807 -11 1331 250 102 47 chr2 237164689 237165766 -13522088 - L1MCc LINE L1 -4870 2071 945 571 266 29 55 chr2 237165766 237166078 -13521776 - L1MCc LINE L1 -6042 381 78 255 233 17 0 chr2 237166110 237166170 -13521684 - L1MCc LINE L1 -6338 85 25 494 258 8 8 chr2 237166492 237166612 -13521242 - MIR3 SINE MIR -7 201 82 303 296 92 41 chr2 237167133 237167329 -13520525 + HAL1b LINE L1 1143 1348 0 275 282 56 33 chr2 237168176 237168397 -13519457 + L2 LINE L2 3026 3313 0 1492 154 23 96 chr2 237168981 237169399 -13518455 - MLT1C LTR MaLR -24 443 55 2051 141 0 7 chr2 237169399 237169704 -13518150 - AluSq SINE Alu -1 312 10 1492 154 23 96 chr2 237169704 237169756 -13518098 - MLT1C LTR MaLR -412 55 1 286 312 13 0 chr2 237170231 237170308 -13517546 - L2 LINE L2 -61 3211 3134 663 237 58 81 chr2 237170472 237170780 -13517074 + LTR16C LTR ERVL 160 460 -31 449 169 65 24 chr2 237171209 237171333 -13516521 - MER106A DNA MER1_type 0 236 108 246 269 15 0 chr2 237171522 237171589 -13516265 + MLT1F LTR MaLR 5 72 -483 449 241 81 24 chr2 237171614 237171781 -13516073 + MLT1F LTR MaLR 215 357 -185 432 236 8 63 chr2 237171776 237171903 -13515951 + MLT1F LTR MaLR 476 595 0 * 186 71 0 0 chr2 237172840 237172868 -13514986 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 530 274 35 58 chr2 237173518 237173588 -13514266 + MIR SINE MIR 42 112 -150 2154 144 40 14 chr2 237173588 237173942 -13513912 - THE1B LTR MaLR 0 364 2 530 274 35 58 chr2 237173942 237174097 -13513757 + MIR SINE MIR 112 262 0 255 61 0 0 chr2 237174408 237174441 -13513413 + (CAT)n Simple_repeat Simple_repeat 3 35 0 346 289 66 30 chr2 237174493 237174659 -13513195 - MIR SINE MIR -62 200 29 27 0 0 0 chr2 237175339 237175366 -13512488 + AT_rich Low_complexity Low_complexity 1 27 0 607 262 50 0 chr2 237177164 237177305 -13510549 + MER5A DNA MER1_type 3 150 -39 976 87 0 0 chr2 237177319 237177457 -13510397 - HERVK LTR ERVK -5545 1698 1561 804 93 8 0 chr2 237177699 237177817 -13510037 + LTR5 LTR ERVK 851 969 0 181 355 135 20 chr2 237177867 237178067 -13509787 - L2 LINE L2 -221 3051 2829 2538 141 6 64 chr2 237178565 237179084 -13508770 + L1MC1 LINE L1 5840 6328 -5 942 284 167 6 chr2 237179169 237179654 -13508200 + L2 LINE L2 832 1394 -1920 1470 178 103 23 chr2 237179655 237180043 -13507811 + MLT1C LTR MaLR 2 420 -47 1465 242 19 64 chr2 237180047 237180530 -13507324 + MLT2B1 LTR ERVL 3 463 -57 305 198 10 83 chr2 237180559 237180655 -13507199 - L1MC4 LINE L1 -1340 6702 6614 233 44 0 186 chr2 237180660 237180773 -13507081 + (TA)n Simple_repeat Simple_repeat 2 93 0 458 63 0 181 chr2 237180828 237181527 -13506327 + (TA)n Simple_repeat Simple_repeat 1 572 0 368 82 5 118 chr2 237181578 237181773 -13506081 + (TA)n Simple_repeat Simple_repeat 2 174 0 263 93 69 84 chr2 237181776 237181846 -13506008 + MLT2B1 LTR ERVL 446 520 0 * 318 157 0 0 chr2 237181846 237181896 -13505958 + MLT1C LTR MaLR 418 467 0 1098 264 57 47 chr2 237181898 237182104 -13505750 + L2 LINE L2 1392 1594 -1720 2016 102 47 99 chr2 237182104 237182488 -13505366 - THE1B LTR MaLR 0 364 1 10971 94 53 0 chr2 237182488 237183989 -13503865 - THE1B-int LTR MaLR 0 1580 1 2197 113 51 20 chr2 237183989 237184342 -13503512 - THE1B LTR MaLR 0 364 1 1098 264 57 47 chr2 237184342 237184621 -13503233 + L2 LINE L2 1593 1884 -1430 220 272 116 13 chr2 237184798 237184899 -13502955 + MIR3 SINE MIR 79 191 -17 269 327 27 0 chr2 237185007 237185117 -13502737 + GA-rich Low_complexity Low_complexity 4 116 0 2459 89 0 3 chr2 237185138 237185451 -13502403 + AluSq SINE Alu 1 312 -1 351 323 65 24 chr2 237185803 237185927 -13501927 + MER91A DNA MER1_type 1 129 -67 2059 117 0 23 chr2 237186095 237186395 -13501459 + AluSq SINE Alu 1 293 -20 1166 258 63 21 chr2 237186496 237186969 -13500885 - MER113 DNA MER1_type? 0 521 29 482 266 58 31 chr2 237187527 237187753 -13500101 + MER106A DNA MER1_type 1 232 -4 629 189 147 32 chr2 237187760 237187950 -13499904 - MER20 DNA MER1_type -2 217 6 369 250 46 40 chr2 237189322 237189474 -13498380 + MIR SINE MIR 110 262 0 241 381 59 17 chr2 237189502 237189620 -13498234 - MIR3 SINE MIR -50 158 36 1904 276 42 22 chr2 237189691 237190235 -13497619 - MLT1H1 LTR MaLR 0 555 1 201 143 0 0 chr2 237190348 237190383 -13497471 + (TG)n Simple_repeat Simple_repeat 1 35 0 24 77 0 0 chr2 237190400 237190452 -13497402 + AT_rich Low_complexity Low_complexity 1 52 0 223 242 15 15 chr2 237191501 237191567 -13496287 + (TA)n Simple_repeat Simple_repeat 1 66 0 350 264 148 71 chr2 237191615 237191952 -13495902 - L1MC4a LINE L1 -1406 6402 6040 496 216 7 7 chr2 237192017 237192156 -13495698 + (CATA)n Simple_repeat Simple_repeat 2 140 0 272 289 58 0 chr2 237192396 237192517 -13495337 - L1MC4a LINE L1 -2025 5783 5656 429 323 43 18 chr2 237193345 237193509 -13494345 + MIR SINE MIR 21 188 -74 1568 292 103 71 chr2 237195060 237196191 -13491663 + L2 LINE L2 2153 3302 -11 305 173 0 0 chr2 237196408 237196460 -13491394 - L1MC4 LINE L1 -1339 6703 6652 277 28 0 0 chr2 237196879 237196915 -13490939 - MADE1 DNA Mariner -3 77 42 3919 181 16 9 chr2 237197783 237198555 -13489299 - L1MB3 LINE L1 0 6183 5407 21 0 0 0 chr2 237198741 237198762 -13489092 + AT_rich Low_complexity Low_complexity 1 21 0 1211 175 15 0 chr2 237200023 237200229 -13487625 + MER6B DNA MER2_type 2 210 0 225 235 29 0 chr2 237201855 237201923 -13485931 + (CATA)n Simple_repeat Simple_repeat 4 73 0 300 222 0 91 chr2 237201924 237202023 -13485831 - L1MC4 LINE L1 -1339 6703 6614 21 0 0 0 chr2 237202204 237202225 -13485629 + AT_rich Low_complexity Low_complexity 1 21 0 584 199 168 12 chr2 237203527 237203688 -13484166 - MER5A DNA MER1_type 0 189 4 331 318 106 34 chr2 237203904 237204140 -13483714 + MIR SINE MIR 4 256 -6 194 284 90 0 chr2 237204218 237204285 -13483569 + MIR SINE MIR 36 108 -154 265 256 0 26 chr2 237205256 237205334 -13482520 + CT-rich Low_complexity Low_complexity 1 76 0 195 204 0 0 chr2 237205467 237205511 -13482343 + GA-rich Low_complexity Low_complexity 6 49 0 307 355 17 47 chr2 237205635 237205934 -13481920 - MER102b DNA MER1_type -50 291 2 685 305 85 7 chr2 237205949 237206254 -13481600 + MLT1J2 LTR MaLR 1 329 -121 2259 77 3 46 chr2 237206913 237207237 -13480617 + AluY SINE Alu 1 310 -1 203 282 111 26 chr2 237209422 237209539 -13478315 - MIR SINE MIR -108 154 28 296 338 128 10 chr2 237209754 237209953 -13477901 + MIR SINE MIR 16 233 -29 405 306 86 24 chr2 237210777 237210986 -13476868 - MIR SINE MIR -28 234 13 200 116 70 0 chr2 237211424 237211467 -13476387 + T-rich Low_complexity Low_complexity 3 48 0 207 0 0 0 chr2 237211536 237211559 -13476295 + (CA)n Simple_repeat Simple_repeat 2 24 0 323 286 35 7 chr2 237211888 237212102 -13475752 - L1MC/D LINE L1 -803 5343 5219 26 30 0 0 chr2 237213549 237213582 -13474272 + AT_rich Low_complexity Low_complexity 1 33 0 254 95 48 0 chr2 237213643 237213685 -13474169 - L1ME2 LINE L1 -9 6155 6112 207 0 0 0 chr2 237214975 237214998 -13472856 + (A)n Simple_repeat Simple_repeat 1 23 0 2455 93 26 34 chr2 237215863 237216241 -13471613 - THE1C LTR MaLR 0 375 1 1490 172 69 19 chr2 237216241 237216502 -13471352 - AluJo SINE Alu -38 274 1 21 0 0 0 chr2 237216509 237216530 -13471324 + AT_rich Low_complexity Low_complexity 1 21 0 221 250 88 12 chr2 237216532 237216612 -13471242 - MIR SINE MIR -120 142 57 1174 208 5 0 chr2 237216707 237216914 -13470940 - AluJb SINE Alu -18 294 87 275 211 158 26 chr2 237216930 237217006 -13470848 - MIR SINE MIR -117 145 60 23 0 0 0 chr2 237217588 237217611 -13470243 + AT_rich Low_complexity Low_complexity 1 23 0 541 246 0 0 chr2 237217821 237217935 -13469919 - MER81 DNA DNA 0 114 1 1110 202 85 78 chr2 237219168 237219537 -13468317 + MLT2D LTR ERVL 1 375 -39 381 22 0 0 chr2 237219537 237219583 -13468271 + (CA)n Simple_repeat Simple_repeat 1 46 0 1110 202 85 78 chr2 237219583 237219624 -13468230 + MLT2D LTR ERVL 375 414 0 620 252 110 63 chr2 237219628 237220072 -13467782 - L1ME2 LINE L1 -339 5782 5316 209 343 121 18 chr2 237220282 237220448 -13467406 + MIR SINE MIR 8 190 -72 2158 161 0 0 chr2 237220468 237220829 -13467025 - L1PA16 LINE L1 -15 6151 5791 1275 128 5 0 chr2 237220829 237221033 -13466821 + L1P5 LINE L1 5460 5664 -492 26 30 0 0 chr2 237221183 237221216 -13466638 + AT_rich Low_complexity Low_complexity 1 33 0 225 303 97 55 chr2 237221530 237221675 -13466179 + MIR SINE MIR 47 197 -65 319 349 34 7 chr2 237221786 237221932 -13465922 + MIR SINE MIR 6 152 -56 573 280 125 40 chr2 237222050 237222290 -13465564 + LTR33 LTR ERVL 80 369 -152 2395 125 3 29 chr2 237222290 237222675 -13465179 - THE1C LTR MaLR 0 375 1 573 280 125 40 chr2 237222675 237222834 -13465020 + LTR33 LTR ERVL 369 513 -8 920 186 25 29 chr2 237223878 237224082 -13463772 - MER3 DNA MER1_type -6 203 1 1774 189 30 0 chr2 237224384 237224717 -13463137 - MER2 DNA MER2_type -1 343 1 281 292 44 0 chr2 237224726 237224839 -13463015 + MLT1L LTR MaLR 359 476 -139 1385 172 4 17 chr2 237226102 237226334 -13461520 + AluJb SINE Alu 71 299 -13 206 152 0 22 chr2 237226962 237227008 -13460846 + GA-rich Low_complexity Low_complexity 2 46 0 236 238 48 9 chr2 237227465 237227570 -13460284 + (TA)n Simple_repeat Simple_repeat 2 110 0 338 354 104 5 chr2 237228148 237228340 -13459514 - MIR SINE MIR -23 239 29 1108 207 43 72 chr2 237228525 237228823 -13459031 - MLT1A1 LTR MaLR 0 365 79 2351 95 0 29 chr2 237228823 237229139 -13458715 + AluY SINE Alu 1 307 -4 1108 207 43 72 chr2 237229139 237229216 -13458638 - MLT1A1 LTR MaLR -286 79 1 197 237 17 0 chr2 237229329 237229388 -13458466 + (TATG)n Simple_repeat Simple_repeat 3 62 0 314 300 22 0 chr2 237229445 237229535 -13458319 + L1MC4 LINE L1 6613 6704 -1338 2373 103 0 0 chr2 237230172 237230473 -13457381 - AluSx SINE Alu -11 301 1 1290 214 70 35 chr2 237230964 237231338 -13456516 + MLT1D LTR MaLR 116 502 -3 385 298 0 8 chr2 237233166 237233290 -13454564 - 7SK RNA RNA -70 123 1 303 290 21 31 chr2 237233487 237233655 -13454199 + MER58A DNA MER1_type 4 173 0 411 21 0 0 chr2 237233659 237233707 -13454147 + (CA)n Simple_repeat Simple_repeat 2 49 0 180 327 124 0 chr2 237235505 237235618 -13452236 + MIR SINE MIR 58 184 -78 875 217 22 0 chr2 237235794 237235974 -13451880 - MER5A DNA MER1_type -5 184 1 305 200 0 0 chr2 237237050 237237110 -13450744 - MER103 DNA DNA -88 78 19 1091 266 74 43 chr2 237237147 237238042 -13449812 - L1ME LINE L1 -4636 1444 520 578 184 7 71 chr2 237238691 237238852 -13449002 - FLAM_C SINE Alu 0 153 2 2530 112 5 14 chr2 237239674 237240041 -13447813 - THE1B LTR MaLR 0 364 1 372 273 254 0 chr2 237240105 237240270 -13447584 + L2 LINE L2 3107 3313 0 522 263 42 14 chr2 237242359 237242555 -13445299 - MIR SINE MIR -56 206 2 421 255 7 21 chr2 237243834 237243975 -13443879 - MLT1J LTR MaLR 0 511 373 203 308 31 0 chr2 237244320 237244385 -13443469 - L2 LINE L2 -7 3306 3240 193 164 0 33 chr2 237244619 237244680 -13443174 + CT-rich Low_complexity Low_complexity 1 59 0 528 179 0 9 chr2 237244714 237244820 -13443034 - L1MC4 LINE L1 -155 7887 7783 1899 231 127 32 chr2 237244863 237245587 -13442267 - L1MC4 LINE L1 -365 7677 6885 21 0 0 0 chr2 237246104 237246125 -13441729 + AT_rich Low_complexity Low_complexity 1 21 0 269 80 0 60 chr2 237248626 237248676 -13439178 + (A)n Simple_repeat Simple_repeat 1 47 0 21 0 0 0 chr2 237250273 237250294 -13437560 + AT_rich Low_complexity Low_complexity 1 21 0 401 154 154 19 chr2 237250514 237250618 -13437236 - LTR67 LTR ERVL 0 557 440 198 0 0 0 chr2 237250957 237250979 -13436875 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 466 350 79 19 chr2 237252791 237253108 -13434746 - MER102b DNA MER1_type -2 339 4 339 295 25 8 chr2 237253178 237253300 -13434554 - MER103 DNA DNA -42 124 1 348 344 41 28 chr2 237253463 237253681 -13434173 - MIR SINE MIR -31 231 11 229 258 161 16 chr2 237255152 237255214 -13432640 + L2 LINE L2 3166 3236 -36 334 236 104 56 chr2 237255234 237255271 -13432583 - L1MA10 LINE L1 -3 6331 6295 366 233 49 68 chr2 237255271 237255342 -13432512 - L1ME1 LINE L1 -46 6120 6049 1918 27 0 18 chr2 237255342 237255565 -13432289 + AluY SINE Alu 85 303 -8 366 233 49 68 chr2 237255565 237255656 -13432198 - L1ME1 LINE L1 -117 6049 5961 1298 178 79 142 chr2 237255661 237256397 -13431457 - L1ME1 LINE L1 -611 5555 4885 1662 188 30 15 chr2 237256410 237256740 -13431114 + MLT1A1 LTR MaLR 31 365 0 400 289 45 56 chr2 237256839 237257219 -13430635 + L1MC4a LINE L1 5599 6705 -157 198 0 0 0 chr2 237257499 237257521 -13430333 + (T)n Simple_repeat Simple_repeat 1 22 0 1835 205 149 10 chr2 237257586 237257996 -13429858 + MLT1C LTR MaLR 1 467 0 182 286 0 20 chr2 237258969 237259018 -13428836 + L2 LINE L2 3006 3053 -219 2047 209 35 17 chr2 237259286 237259745 -13428109 - MLT1C LTR MaLR 0 467 1 237 297 16 0 chr2 237260467 237260531 -13427323 + MIR SINE MIR 9 73 -189 210 326 70 0 chr2 237261469 237261555 -13426299 + L2 LINE L2 3152 3243 -29 241 293 98 0 chr2 237261707 237261789 -13426065 - MIR SINE MIR -116 146 57 507 279 106 13 chr2 237263284 237263521 -13424333 + MIR SINE MIR 2 260 -2 225 0 0 0 chr2 237267325 237267350 -13420504 + (A)n Simple_repeat Simple_repeat 1 25 0 29 78 0 0 chr2 237267969 237268033 -13419821 + GC_rich Low_complexity Low_complexity 1 64 0 29 28 0 0 chr2 237268052 237268088 -13419766 + GC_rich Low_complexity Low_complexity 1 36 0 206 277 0 0 chr2 237268211 237268276 -13419578 + G-rich Low_complexity Low_complexity 2 66 0 198 222 19 19 chr2 237268320 237268374 -13419480 - L2 LINE L2 -5 3267 3214 331 289 164 50 chr2 237268385 237268683 -13419171 - L2 LINE L2 0 3313 2982 352 297 34 17 chr2 237268908 237269026 -13418828 - MIR SINE MIR -78 184 65 486 306 77 14 chr2 237271229 237271438 -13416416 + MIR SINE MIR 40 261 -1 1450 183 65 38 chr2 237271605 237271895 -13415959 - AluJb SINE Alu -14 298 1 1456 206 82 69 chr2 237272229 237272767 -13415087 + MLT1H LTR MaLR 3 547 -2 301 128 0 0 chr2 237273657 237273704 -13414150 - MER91 DNA MER1_type -143 47 1 545 297 49 64 chr2 237274012 237274339 -13413515 + LTR16A LTR ERVL 1 322 -128 1125 313 55 29 chr2 237274412 237274959 -13412895 + HERV16 LTR ERVL 100 660 -4336 1729 221 29 13 chr2 237275022 237275474 -13412380 + L1ME1 LINE L1 2636 3094 -3052 1842 208 26 3 chr2 237275484 237275831 -13412023 + L1ME1 LINE L1 5518 5872 -294 5613 94 1 11 chr2 237275838 237276624 -13411230 + L1PA10 LINE L1 5388 6165 -3 1100 197 62 94 chr2 237276615 237276935 -13410919 + L1ME1 LINE L1 5853 6162 -4 * 21 0 0 0 chr2 237276935 237276956 -13410898 + AT_rich Low_complexity Low_complexity 1 21 0 404 336 25 48 chr2 237276969 237277323 -13410531 + ERVL LTR ERVL 4970 5315 -449 621 276 25 0 chr2 237278094 237278257 -13409597 + MIR3 SINE MIR 37 203 -5 399 78 234 0 chr2 237279051 237279115 -13408739 + MADE1 DNA Mariner 2 80 0 264 116 23 0 chr2 237279127 237279170 -13408684 + MADE1 DNA Mariner 36 79 -1 830 267 17 17 chr2 237279178 237279418 -13408436 - MIR SINE MIR -19 243 4 252 285 211 8 chr2 237279429 237279552 -13408302 - MIR3 SINE MIR -10 198 51 491 300 113 17 chr2 237279580 237279810 -13408044 - MIR SINE MIR 0 262 11 493 289 120 23 chr2 237280134 237280400 -13407454 - L1ME LINE L1 -501 5620 5329 304 304 88 44 chr2 237280820 237281047 -13406807 - L1ME LINE L1 -3316 2830 2594 23 78 0 0 chr2 237281405 237281456 -13406398 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr2 237281534 237281556 -13406298 + AT_rich Low_complexity Low_complexity 1 22 0 465 349 66 30 chr2 237281776 237282111 -13405743 + L1MC5 LINE L1 4712 5058 -1088 24 32 0 0 chr2 237282141 237282172 -13405682 + AT_rich Low_complexity Low_complexity 1 31 0 2168 260 55 9 chr2 237282292 237282926 -13404928 + L1MC5 LINE L1 5254 5916 -1892 764 159 32 19 chr2 237282949 237283106 -13404748 + L1MA9 LINE L1 6152 6310 -2 580 218 112 25 chr2 237283122 237283319 -13404535 + L1MC5 LINE L1 7015 7228 -733 787 206 52 5 chr2 237283521 237283715 -13404139 + MER33 DNA MER1_type 43 245 -79 819 202 29 6 chr2 237283715 237283888 -13403966 + L1ME LINE L1 5538 5714 -452 348 154 319 0 chr2 237283887 237283978 -13403876 + L1MA10 LINE L1 6190 6309 -25 * 517 178 34 8 chr2 237283979 237284097 -13403757 + MER33 DNA MER1_type 204 324 0 461 280 124 5 chr2 237284098 237284316 -13403538 + L1MC5 LINE L1 7331 7574 -387 702 158 153 15 chr2 237285058 237285254 -13402600 + MER5C DNA MER1_type 60 282 -42 424 40 0 0 chr2 237285345 237285395 -13402459 + HERVK11D LTR ERVK 7703 7752 0 6685 36 30 0 chr2 237285395 237286171 -13401683 + MER11D LTR ERVK 1 799 -98 207 0 0 0 chr2 237286171 237286194 -13401660 + (A)n Simple_repeat Simple_repeat 1 23 0 205 81 0 54 chr2 237286197 237286234 -13401620 - MER5A DNA MER1_type -40 149 115 * 283 246 33 0 chr2 237286202 237286263 -13401591 + MER5A DNA MER1_type 55 117 -72 3186 137 45 13 chr2 237286327 237286412 -13401442 - L1MA8 LINE L1 -73 6218 6137 2104 115 0 26 chr2 237286412 237286716 -13401138 - AluSx SINE Alu -15 297 2 3186 137 45 13 chr2 237286716 237287186 -13400668 - L1MA8 LINE L1 -154 6137 5645 8194 116 23 27 chr2 237287186 237288339 -13399515 + HSMAR2 DNA Mariner 3 1152 -150 2229 110 3 19 chr2 237288339 237288647 -13399207 - AluSq SINE Alu -10 303 1 8194 116 23 27 chr2 237288647 237288759 -13399095 + HSMAR2 DNA Mariner 1152 1263 -39 621 158 0 0 chr2 237288761 237288881 -13398973 + (TA)n Simple_repeat Simple_repeat 2 121 0 2303 146 20 2 chr2 237288939 237289429 -13398425 - L1MA8 LINE L1 -646 5645 5148 236 185 169 15 chr2 237289430 237289495 -13398359 - MER5A DNA MER1_type -113 76 2 918 153 6 25 chr2 237289504 237289661 -13398193 + MER3 DNA MER1_type 1 154 -55 2178 130 13 0 chr2 237289661 237289969 -13397885 + AluSx SINE Alu 1 312 0 261 57 0 0 chr2 237289969 237290004 -13397850 + (GGAA)n Simple_repeat Simple_repeat 1 35 0 311 222 0 16 chr2 237290005 237290068 -13397786 + MER3 DNA MER1_type 148 209 0 2714 45 0 0 chr2 237290844 237291155 -13396699 + AluY SINE Alu 1 311 0 1079 237 41 10 chr2 237291302 237291597 -13396257 + L1M4 LINE L1 4471 4774 -1372 509 251 35 55 chr2 237292043 237292242 -13395612 + MIR SINE MIR 58 252 -10 1640 158 40 16 chr2 237292609 237292913 -13394941 - AluJb SINE Alu -1 311 1 272 329 36 50 chr2 237295651 237295791 -13392063 - L2 LINE L2 -1 3271 3134 292 289 12 0 chr2 237295817 237295900 -13391954 + MIR SINE MIR 153 236 -26 2070 212 54 82 chr2 237296392 237296962 -13390892 + MLT2B3 LTR ERVL 1 554 0 1005 176 42 84 chr2 237299899 237300138 -13387716 - MLT1B LTR MaLR -2 388 160 21 0 0 0 chr2 237300258 237300279 -13387575 + AT_rich Low_complexity Low_complexity 1 21 0 3854 170 39 56 chr2 237300279 237300415 -13387439 - L1MA10 LINE L1 -29 6305 6168 198 0 0 0 chr2 237300415 237300437 -13387417 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3854 170 39 56 chr2 237300437 237300454 -13387400 - L1MA10 LINE L1 -166 6168 6152 1705 111 0 0 chr2 237300454 237300679 -13387175 + AluSq SINE Alu 23 247 -66 3854 170 39 56 chr2 237300679 237301347 -13386507 - L1MA10 LINE L1 -182 6152 5497 * 8653 189 24 17 chr2 237301340 237303143 -13384711 + L1 LINE L1 3462 5277 -869 775 218 40 0 chr2 237303144 237303318 -13384536 - MLT1B LTR MaLR -209 181 1 1852 229 68 16 chr2 237303417 237303858 -13383996 - MLT1C LTR MaLR 0 467 4 231 170 0 0 chr2 237303983 237304030 -13383824 + A-rich Low_complexity Low_complexity 1 47 0 2588 54 0 10 chr2 237304392 237304706 -13383148 - AluY SINE Alu 0 311 1 2353 59 7 33 chr2 237305052 237305358 -13382496 + AluY SINE Alu 1 298 -13 2018 114 69 0 chr2 237305729 237306019 -13381835 - AluSx SINE Alu -2 310 1 599 26 13 0 chr2 237306501 237306578 -13381276 + (TG)n Simple_repeat Simple_repeat 1 78 0 204 40 0 0 chr2 237306583 237306608 -13381246 + (TTG)n Simple_repeat Simple_repeat 3 27 0 186 43 0 0 chr2 237307473 237307496 -13380358 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1979 112 95 0 chr2 237307498 237307783 -13380071 - AluSx SINE Alu 0 312 1 221 311 111 30 chr2 237308108 237308243 -13379611 + L2 LINE L2 3126 3271 -1 1575 140 0 8 chr2 237308691 237308934 -13378920 - AluSg/x SINE Alu 0 310 70 266 328 77 42 chr2 237308978 237309484 -13378370 + L2 LINE L2 1712 2235 -1079 1456 310 65 26 chr2 237310060 237310676 -13377178 - L3 LINE CR1 -740 837 198 618 156 0 92 chr2 237312168 237312309 -13375545 + MLT2C1 LTR ERVL 270 397 0 1657 180 10 20 chr2 237312919 237313213 -13374641 - AluJo SINE Alu -21 291 1 184 204 92 71 chr2 237313689 237313787 -13374067 - L2 LINE L2 -4 3268 3169 2222 105 26 0 chr2 237314131 237314435 -13373419 - AluSx SINE Alu 0 312 1 36 53 0 0 chr2 237314470 237314527 -13373327 + AT_rich Low_complexity Low_complexity 1 57 0 1985 128 10 26 chr2 237315038 237315342 -13372512 - AluSx SINE Alu -13 299 1 511 271 130 21 chr2 237316055 237316247 -13371607 + MIR SINE MIR 50 262 0 1874 154 7 14 chr2 237317365 237317651 -13370203 + AluSx SINE Alu 1 284 -28 498 350 68 42 chr2 237317656 237318065 -13369789 + L2 LINE L2 2221 2640 -674 2358 66 0 13 chr2 237318079 237318382 -13369472 - AluY SINE Alu -12 299 1 184 289 87 39 chr2 237318646 237318750 -13369104 + L2 LINE L2 2934 3042 -271 3276 124 14 6 chr2 237318800 237319292 -13368562 + L1PA13 LINE L1 5657 6152 -11 27 49 0 0 chr2 237319292 237319333 -13368521 + AT_rich Low_complexity Low_complexity 1 41 0 473 228 24 31 chr2 237319570 237319697 -13368157 + L1ME1 LINE L1 59 184 -6212 3345 152 21 4 chr2 237319734 237320254 -13367600 + L1PA16 LINE L1 5634 6162 -4 980 88 0 0 chr2 237320266 237320402 -13367452 + L1P4 LINE L1 5657 5792 -369 21 36 0 0 chr2 237320403 237320431 -13367423 + AT_rich Low_complexity Low_complexity 1 28 0 2658 265 119 31 chr2 237320547 237320856 -13366998 + L1ME1 LINE L1 352 632 -5583 2133 110 0 50 chr2 237320856 237321175 -13366679 + AluSg SINE Alu 1 303 -7 2658 265 119 31 chr2 237321175 237322663 -13365191 + L1ME1 LINE L1 632 2326 -3889 2180 120 3 0 chr2 237322663 237322962 -13364892 + AluSq SINE Alu 1 300 -13 2658 265 119 31 chr2 237322962 237323018 -13364836 + L1ME1 LINE L1 2326 2376 -3839 2099 152 14 25 chr2 237323018 237323379 -13364475 + MLT1A1 LTR MaLR 9 365 0 1037 225 95 102 chr2 237323380 237323981 -13363873 + L1ME1 LINE L1 2379 2975 -3240 * 4849 242 88 22 chr2 237323971 237326522 -13361332 + L1ME1 LINE L1 3506 6231 -4 2242 123 7 0 chr2 237326883 237327193 -13360661 - AluSx SINE Alu 0 312 1 23 33 0 0 chr2 237327467 237327497 -13360357 + AT_rich Low_complexity Low_complexity 1 30 0 324 299 0 0 chr2 237327694 237327771 -13360083 + L2 LINE L2 3187 3263 -9 199 314 39 49 chr2 237328136 237328238 -13359616 + MIR3 SINE MIR 15 115 -93 251 340 79 92 chr2 237329389 237329585 -13358269 - L2 LINE L2 0 3272 3080 1627 157 28 21 chr2 237329585 237329872 -13357982 + AluJo SINE Alu 17 305 -7 251 340 79 92 chr2 237329872 237329990 -13357864 - L2 LINE L2 -192 3080 2962 312 297 7 3 chr2 237330192 237330353 -13357501 - MIR SINE MIR -23 239 36 2138 120 0 17 chr2 237330496 237330796 -13357058 - AluSx SINE Alu -17 295 1 1773 52 79 4 chr2 237330811 237331040 -13356814 - AluY SINE Alu -65 246 1 1998 132 4 0 chr2 237331749 237332052 -13355802 + AluSx SINE Alu 1 304 0 229 157 0 181 chr2 237333474 237333508 -13354346 - MER5A DNA MER1_type -91 98 85 2154 119 0 3 chr2 237333508 237333849 -13354005 - AluSx SINE Alu 0 340 1 229 157 0 181 chr2 237333849 237333896 -13353958 - MER5A DNA MER1_type -104 85 31 290 100 0 0 chr2 237333912 237333952 -13353902 - MADE1 DNA Mariner -40 40 1 248 255 168 3 chr2 237334738 237334852 -13353002 - MIR3 SINE MIR -39 169 39 632 256 25 12 chr2 237334924 237335084 -13352770 + MER5B DNA MER1_type 1 162 -16 819 174 64 6 chr2 237335084 237335256 -13352598 + MER53 DNA DNA 1 182 -7 1029 210 0 0 chr2 237335863 237336030 -13351824 + FAM SINE Alu 1 167 -8 1950 134 0 3 chr2 237336108 237336391 -13351463 + AluJb SINE Alu 1 282 -30 189 0 0 0 chr2 237336423 237336444 -13351410 + (GA)n Simple_repeat Simple_repeat 2 22 0 214 197 0 145 chr2 237337496 237337572 -13350282 - L2 LINE L2 -4 3268 3204 2303 93 0 29 chr2 237337897 237338209 -13349645 + AluSx SINE Alu 1 303 -9 1257 140 0 0 chr2 237338209 237338424 -13349430 + AluSg/x SINE Alu 134 348 0 394 238 63 32 chr2 237338520 237338646 -13349208 - L2 LINE L2 0 3313 3184 183 80 0 0 chr2 237338646 237338671 -13349183 + (TG)n Simple_repeat Simple_repeat 2 26 0 200 323 0 46 chr2 237341322 237341387 -13346467 + MIR SINE MIR 87 148 -60 3966 134 49 11 chr2 237341564 237342197 -13345657 - MER51D LTR ERV1 0 657 1 259 196 0 0 chr2 237342358 237342404 -13345450 + L2 LINE L2 3268 3313 0 445 358 15 0 chr2 237342469 237342673 -13345181 + MIR SINE MIR 56 262 0 2183 119 0 13 chr2 237342717 237343019 -13344835 + AluSx SINE Alu 1 298 -14 192 265 0 73 chr2 237343149 237343217 -13344637 + L2 LINE L2 3251 3313 0 254 130 0 19 chr2 237343218 237343272 -13344582 + (TGAA)n Simple_repeat Simple_repeat 2 54 0 1350 160 33 5 chr2 237343322 237343535 -13344319 + MER20 DNA MER1_type 1 219 0 1295 241 126 71 chr2 237344402 237344920 -13342934 - L1ME2 LINE L1 -19 6145 5600 293 211 67 29 chr2 237344990 237345094 -13342760 + L2 LINE L2 2950 3057 -215 696 200 38 27 chr2 237345204 237345389 -13342465 + L1MC3 LINE L1 6911 7097 -688 371 238 0 40 chr2 237345389 237345490 -13342364 + MLT1F1 LTR MaLR 35 131 -436 372 264 54 8 chr2 237345963 237346092 -13341762 - Charlie8 DNA MER1_type -1934 483 349 264 250 0 0 chr2 237346217 237346273 -13341581 - Charlie8 DNA MER1_type -2186 231 176 1033 127 155 0 chr2 237346291 237346472 -13341382 - MER61E LTR ERV1 -22 547 339 344 198 12 47 chr2 237346476 237346562 -13341292 - MER61E LTR ERV1 -388 181 99 * 655 170 111 0 chr2 237346550 237346685 -13341169 - LTR25 LTR ERV1 -412 382 233 319 175 35 132 chr2 237346658 237346772 -13341082 - MER61E LTR ERV1 -465 104 2 * 241 240 99 41 chr2 237346794 237346828 -13341026 - Charlie8 DNA MER1_type -2264 153 122 242 73 24 0 chr2 237346828 237346869 -13340985 + (TG)n Simple_repeat Simple_repeat 1 42 0 241 240 99 41 chr2 237346869 237346955 -13340899 - Charlie8 DNA MER1_type -2295 122 26 1584 161 80 7 chr2 237347014 237347288 -13340566 + AluSx SINE Alu 1 294 -18 313 309 14 43 chr2 237347299 237347438 -13340416 - MIR3 SINE MIR -70 138 4 232 326 11 21 chr2 237347647 237347742 -13340112 + MLT1K LTR MaLR 157 250 -338 552 281 88 40 chr2 237347825 237348074 -13339780 - L2 LINE L2 0 3313 3053 438 252 127 57 chr2 237348074 237348327 -13339527 + MLT1K LTR MaLR 344 585 -3 276 311 68 38 chr2 237348947 237349079 -13338775 - L2 LINE L2 -4 3268 3133 1411 181 28 38 chr2 237349171 237349437 -13338417 - MER58D DNA MER1_type -2034 386 122 1376 179 25 130 chr2 237349437 237349845 -13338009 + MLT1A1 LTR MaLR 1 365 0 1411 181 28 38 chr2 237349845 237349898 -13337956 - MER58D DNA MER1_type -2298 122 70 * 2866 153 138 157 chr2 237349888 237350293 -13337561 + L1MC3 LINE L1 6735 7146 -639 350 248 0 40 chr2 237350293 237350394 -13337460 + MLT1F1 LTR MaLR 35 131 -436 2866 153 138 157 chr2 237350394 237350939 -13336915 + L1MC3 LINE L1 7146 7765 -20 3394 29 11 0 chr2 237350939 237351317 -13336537 + L1PA4 LINE L1 5771 6152 -3 383 259 0 12 chr2 237351394 237351475 -13336379 - MER58D DNA MER1_type -306 80 1 368 341 52 0 chr2 237352816 237352951 -13334903 - MIR SINE MIR -72 190 49 2376 68 0 7 chr2 237357181 237357474 -13330380 - AluY SINE Alu -9 302 12 196 219 0 47 chr2 237357723 237357787 -13330067 + MIR SINE MIR 46 106 -156 824 199 76 0 chr2 237358172 237358343 -13329511 + MER58A DNA MER1_type 2 185 -39 26 30 0 0 chr2 237358496 237358529 -13329325 + AT_rich Low_complexity Low_complexity 1 33 0 417 260 62 34 chr2 237358987 237359133 -13328721 - MIR SINE MIR -65 197 48 413 292 64 45 chr2 237359303 237359505 -13328349 + MIR SINE MIR 55 260 -2 382 73 0 0 chr2 237360769 237360824 -13327030 - Alu SINE Alu 0 301 247 820 118 9 0 chr2 237360824 237360934 -13326920 - AluYb8 SINE Alu -206 112 2 1121 101 0 0 chr2 237361618 237361767 -13326087 - AluSg/x SINE Alu -6 306 158 2068 125 3 0 chr2 237362212 237362509 -13325345 - AluSx SINE Alu -14 298 1 1088 88 0 0 chr2 237362832 237362969 -13324885 + L1PA11 LINE L1 6035 6171 -3 2288 101 7 0 chr2 237364092 237364389 -13323465 + AluSx SINE Alu 1 299 -13 292 290 21 11 chr2 237364596 237364689 -13323165 + L1MC4a LINE L1 5610 5703 -418 1842 185 0 3 chr2 237364853 237365150 -13322704 + AluJb SINE Alu 1 296 -16 234 254 161 8 chr2 237365411 237365529 -13322325 - MIR SINE MIR 0 262 127 286 278 71 24 chr2 237365599 237365725 -13322129 + L1ME4a LINE L1 5986 6117 -4 346 226 78 52 chr2 237365838 237365953 -13321901 + MIR SINE MIR 100 217 -45 202 271 0 0 chr2 237368395 237368443 -13319411 - MIR SINE MIR -109 99 52 280 269 21 21 chr2 237368866 237368959 -13318895 - L2 LINE L2 0 3313 3221 330 311 112 69 chr2 237369186 237369790 -13318064 - L2 LINE L2 -337 2977 2341 5690 141 20 16 chr2 237369790 237370656 -13317198 + L1PA16 LINE L1 5058 5934 -232 1681 171 27 10 chr2 237370656 237370949 -13316905 + AluSx SINE Alu 1 298 -14 5690 141 20 16 chr2 237370949 237371181 -13316673 + L1PA16 LINE L1 5934 6164 -2 330 311 112 69 chr2 237371181 237371231 -13316623 - L2 LINE L2 -973 2341 2295 737 293 54 4 chr2 237371264 237371503 -13316351 - MIR SINE MIR 0 262 12 297 269 137 26 chr2 237371506 237371733 -13316121 - MER112 DNA MER1_type -7 253 2 192 243 0 0 chr2 237372023 237372060 -13315794 - L2 LINE L2 -15 3257 3221 1668 185 84 29 chr2 237372532 237372585 -13315269 + MLT1A1 LTR MaLR 1 50 -315 2265 124 29 48 chr2 237372585 237372963 -13314891 + THE1C LTR MaLR 3 373 -2 1668 185 84 29 chr2 237372963 237373255 -13314599 + MLT1A1 LTR MaLR 50 365 0 471 262 141 41 chr2 237373259 237373599 -13314255 + L1MC4a LINE L1 5680 6053 -1755 25 0 0 0 chr2 237373602 237373627 -13314227 + AT_rich Low_complexity Low_complexity 1 25 0 218 367 106 19 chr2 237373778 237373985 -13313869 + L2 LINE L2 3048 3272 0 2456 192 50 19 chr2 237374610 237375094 -13312760 + MLT1D LTR MaLR 7 505 0 598 280 97 5 chr2 237375094 237375301 -13312553 - L2 LINE L2 -254 3059 2834 242 220 88 77 chr2 237375485 237375576 -13312278 - L3 LINE CR1 -3 1574 1483 218 273 81 50 chr2 237375665 237375764 -13312090 - L3 LINE CR1 -861 716 615 284 348 152 6 chr2 237376035 237376213 -13311641 - MIR SINE MIR -6 256 53 190 290 137 30 chr2 237376473 237376604 -13311250 - MIR3 SINE MIR -63 145 1 2238 114 7 0 chr2 237377418 237377725 -13310129 + AluSc SINE Alu 1 309 0 20951 127 14 88 chr2 237377743 237381830 -13306024 + L1PA7 LINE L1 2 3785 -2361 419 107 0 0 chr2 237381830 237381886 -13305968 + Alu SINE Alu 237 292 -19 12045 91 0 5 chr2 237381886 237384374 -13303480 + L1PA7 LINE L1 3775 6266 0 261 0 0 0 chr2 237384637 237384666 -13303188 + (TG)n Simple_repeat Simple_repeat 2 30 0 495 0 0 0 chr2 237385366 237385421 -13302433 + (TA)n Simple_repeat Simple_repeat 2 56 0 21 0 0 0 chr2 237386561 237386582 -13301272 + AT_rich Low_complexity Low_complexity 1 21 0 2327 103 0 7 chr2 237388306 237388616 -13299238 - AluSx SINE Alu -4 308 1 180 316 18 0 chr2 237388840 237388897 -13298957 - MIR SINE MIR -1 261 204 616 308 110 28 chr2 237388982 237389300 -13298554 + L1MEc LINE L1 55 398 -5998 1371 272 77 48 chr2 237389370 237389930 -13297924 + L1MEc LINE L1 498 1040 -5356 2244 104 7 0 chr2 237389930 237390227 -13297627 + AluSx SINE Alu 12 310 -2 1371 272 77 48 chr2 237390227 237390339 -13297515 + L1MEc LINE L1 1040 1147 -5249 2529 74 0 0 chr2 237390339 237390648 -13297206 + AluY SINE Alu 1 309 -2 1371 272 77 48 chr2 237390648 237390868 -13296986 + L1MEc LINE L1 1147 1417 -4979 2260 141 118 15 chr2 237390868 237391266 -13296588 + LTR47A LTR ERVL 1 439 -13 344 283 69 21 chr2 237391266 237391411 -13296443 + LTR47A-int LTR ERVL 16 167 -5176 336 148 49 62 chr2 237391614 237391695 -13296159 + LTR23-int LTR ERV1 2207 2286 -2594 * 2467 235 66 58 chr2 237391663 237392390 -13295464 + LTR23-int LTR ERV1 1847 2582 -3749 2224 90 7 3 chr2 237392390 237392680 -13295174 + AluSx SINE Alu 1 291 -21 2467 235 66 58 chr2 237392680 237392730 -13295124 + LTR23-int LTR ERV1 2582 2630 -3701 308 77 0 169 chr2 237392777 237392842 -13295012 + LTR23-int LTR ERV1 1200 1253 -3870 * 1107 188 68 55 chr2 237392834 237393142 -13294712 + LTR23-int LTR ERV1 2554 2865 -3893 3575 123 12 16 chr2 237393179 237393746 -13294108 + LTR23-int LTR ERV1 3014 3578 -3180 354 98 20 0 chr2 237393747 237393798 -13294056 + LTR47A LTR ERVL 401 452 0 2443 192 11 22 chr2 237393850 237394313 -13293541 + L1MD1 LINE L1 2 459 -6081 6125 221 65 61 chr2 237394326 237396601 -13291253 + L1MD1 LINE L1 3055 5338 -1202 5334 185 54 48 chr2 237396600 237397773 -13290081 + L1MC3 LINE L1 6140 7319 -466 * 3746 166 28 7 chr2 237397772 237398464 -13289390 + L1MD1 LINE L1 5708 6413 -223 * 811 169 0 0 chr2 237398467 237398603 -13289251 + L1MD1 LINE L1 6486 6621 -15 1792 212 85 21 chr2 237398619 237399202 -13288652 + L1ME LINE L1 4815 5443 -719 261 276 102 10 chr2 237400152 237400250 -13287604 + MER103 DNA DNA 59 165 -1 409 341 150 39 chr2 237400627 237400978 -13286876 - L2 LINE L2 -459 2855 2428 2261 120 52 27 chr2 237400978 237401344 -13286510 - THE1C LTR MaLR 0 375 1 409 341 150 39 chr2 237401344 237401505 -13286349 - L2 LINE L2 -886 2428 2286 671 284 94 85 chr2 237401867 237402621 -13285233 + L1ME4a LINE L1 5314 6074 -47 546 227 130 26 chr2 237404630 237404784 -13283070 - MIR SINE MIR -70 192 23 28 29 0 0 chr2 237405062 237405097 -13282757 + AT_rich Low_complexity Low_complexity 1 35 0 274 279 0 0 chr2 237405168 237405229 -13282625 + C-rich Low_complexity Low_complexity 1 61 0 2268 103 0 0 chr2 237408048 237408340 -13279514 + AluSx SINE Alu 1 292 -20 246 320 48 0 chr2 237408368 237408471 -13279383 + L1ME LINE L1 5616 5723 -398 27 49 0 0 chr2 237408746 237408787 -13279067 + AT_rich Low_complexity Low_complexity 1 41 0 223 368 9 53 chr2 237409155 237409269 -13278585 - L2 LINE L2 -23 3249 3141 22 0 0 0 chr2 237409789 237409811 -13278043 + AT_rich Low_complexity Low_complexity 1 22 0 2383 100 0 0 chr2 237410084 237410394 -13277460 - AluSg SINE Alu 0 310 1 200 179 32 53 chr2 237410467 237410562 -13277292 + (TA)n Simple_repeat Simple_repeat 2 94 0 1751 137 39 0 chr2 237411074 237411330 -13276524 - AluSq SINE Alu -47 266 1 893 220 128 20 chr2 237411458 237411654 -13276200 + MLT1E LTR MaLR 2 175 -418 2172 119 3 0 chr2 237411654 237411947 -13275907 + AluSp SINE Alu 1 294 -19 893 220 128 20 chr2 237411947 237412275 -13275579 + MLT1E LTR MaLR 175 593 0 316 333 112 26 chr2 237412349 237412980 -13274874 - HAL1b LINE L1 -611 1682 310 267 321 28 0 chr2 237414322 237414431 -13273423 + MIR SINE MIR 142 253 -9 2261 96 0 43 chr2 237415398 237415721 -13272133 + AluSq SINE Alu 1 309 -4 27 0 0 0 chr2 237415857 237415884 -13271970 + AT_rich Low_complexity Low_complexity 1 27 0 1107 163 17 82 chr2 237416586 237416819 -13271035 + MER20 DNA MER1_type 2 219 0 1373 176 18 9 chr2 237416827 237417049 -13270805 + MER58A DNA MER1_type 1 224 0 1503 213 13 0 chr2 237417086 237417386 -13270468 - L1 LINE L1 -880 5266 4963 4414 152 12 42 chr2 237417386 237418214 -13269640 + L1MB1 LINE L1 5362 6164 -4 296 219 39 8 chr2 237418214 237418342 -13269512 + (TA)n Simple_repeat Simple_repeat 1 132 0 231 88 0 0 chr2 237418418 237418452 -13269402 + (GA)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr2 237419101 237419122 -13268732 + AT_rich Low_complexity Low_complexity 1 21 0 297 274 195 61 chr2 237419260 237419803 -13268051 - L2 LINE L2 -819 2495 1880 1124 265 90 38 chr2 237419803 237420106 -13267748 + MER20B DNA MER1_type 4 339 -444 2240 114 0 0 chr2 237420106 237420405 -13267449 + AluSx SINE Alu 1 299 -13 1124 265 90 38 chr2 237420405 237420547 -13267307 + MER20B DNA MER1_type 339 472 -311 379 306 64 32 chr2 237420566 237420785 -13267069 + L2 LINE L2 3022 3247 -66 488 278 30 0 chr2 237420998 237421131 -13266723 - MIR SINE MIR -50 212 76 1751 178 100 14 chr2 237421181 237421540 -13266314 - MLT1B LTR MaLR 0 390 1 876 262 53 0 chr2 237421550 237421756 -13266098 - MER20 DNA MER1_type -2 217 1 2601 66 0 0 chr2 237422933 237423238 -13264616 + AluY SINE Alu 1 305 -6 186 118 0 0 chr2 237423396 237423430 -13264424 + (TG)n Simple_repeat Simple_repeat 1 34 0 185 0 40 0 chr2 237423619 237423644 -13264210 + (CA)n Simple_repeat Simple_repeat 1 26 0 465 186 44 53 chr2 237424130 237424243 -13263611 - L2 LINE L2 0 3313 3202 2481 94 0 0 chr2 237424568 237424876 -13262978 + AluSg SINE Alu 1 308 -2 344 369 71 22 chr2 237424942 237425210 -13262644 - L2 LINE L2 -592 2722 2442 202 262 0 33 chr2 237425259 237425320 -13262534 - L2 LINE L2 -17 3296 3238 207 263 13 53 chr2 237425462 237425538 -13262316 - L2 LINE L2 -5 3267 3195 182 203 0 16 chr2 237425690 237425754 -13262100 + GA-rich Low_complexity Low_complexity 2 64 0 3480 59 55 5 chr2 237427081 237427461 -13260393 + MLT2A1 LTR ERVL 3 407 -37 180 0 0 0 chr2 237427461 237427481 -13260373 + (TA)n Simple_repeat Simple_repeat 2 21 0 3480 59 55 5 chr2 237427481 237427521 -13260333 + MLT2A1 LTR ERVL 407 444 0 318 216 0 82 chr2 237428168 237428265 -13259589 + MARNA DNA Mariner 138 226 -360 1411 44 0 0 chr2 237428412 237428572 -13259282 + L1PA3 LINE L1 5996 6155 0 23 0 0 0 chr2 237428793 237428816 -13259038 + AT_rich Low_complexity Low_complexity 1 23 0 923 216 28 6 chr2 237429398 237429579 -13258275 + MER5A DNA MER1_type 4 188 -1 2118 129 0 0 chr2 237429692 237430011 -13257843 - AluSg SINE Alu 0 310 1 22 0 0 0 chr2 237430535 237430557 -13257297 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 237431678 237431699 -13256155 + AT_rich Low_complexity Low_complexity 1 21 0 327 85 0 0 chr2 237431699 237431746 -13256108 + (CA)n Simple_repeat Simple_repeat 2 48 0 942 242 127 69 chr2 237431781 237432262 -13255592 + MLT1H LTR MaLR 1 549 0 3219 145 17 0 chr2 237432726 237433202 -13254652 - L1PA15 LINE L1 -5 6160 5677 3212 207 8 0 chr2 237433202 237433919 -13253935 + L1PA15-16 LINE L1 2317 3039 -3810 649 218 16 0 chr2 237435511 237435635 -13252219 + L1PB4 LINE L1 6024 6149 -7 256 339 224 17 chr2 237435723 237435897 -13251957 + MIR SINE MIR 23 232 -30 270 298 207 4 chr2 237436164 237436329 -13251525 - MIR3 SINE MIR -62 200 10 2298 213 79 42 chr2 237438110 237438702 -13249152 - MER90 LTR ERV1 0 614 1 2280 95 3 0 chr2 237439008 237439303 -13248551 + AluY SINE Alu 1 296 -15 1814 101 105 14 chr2 237441380 237441657 -13246197 + AluSq SINE Alu 1 302 -11 2000 193 56 10 chr2 237442202 237442596 -13245258 + MLT2D LTR ERVL 1 412 -2 226 311 0 0 chr2 237444555 237444616 -13243238 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 1645 231 20 15 chr2 237444912 237445314 -13242540 + L1MB8 LINE L1 5766 6169 -9 25 65 0 0 chr2 237445541 237445587 -13242267 + AT_rich Low_complexity Low_complexity 1 46 0 2157 97 7 0 chr2 237446545 237446851 -13241003 - AluSg SINE Alu 0 310 3 279 125 0 0 chr2 237447217 237447257 -13240597 + MLT1B LTR MaLR 1 40 -427 1457 188 52 70 chr2 237447283 237447685 -13240169 + MLT1B LTR MaLR 27 467 0 2197 99 0 0 chr2 237447950 237448259 -13239595 + AluSg SINE Alu 1 309 0 524 299 54 5 chr2 237448263 237448467 -13239387 - MIR SINE MIR -3 259 46 446 288 85 0 chr2 237449219 237449372 -13238482 - Charlie8 DNA MER1_type -2142 275 110 2294 88 3 0 chr2 237449394 237449701 -13238153 - AluSx SINE Alu 0 308 1 386 306 62 31 chr2 237449823 237450016 -13237838 + MIR SINE MIR 49 247 -15 418 369 83 14 chr2 237450037 237450387 -13237467 - L2 LINE L2 -854 2460 2087 249 343 37 28 chr2 237450471 237450579 -13237275 + L2 LINE L2 3137 3245 -27 189 245 0 0 chr2 237450587 237450636 -13237218 + (CAGA)n Simple_repeat Simple_repeat 3 51 0 231 114 0 0 chr2 237450694 237450729 -13237125 + (A)n Simple_repeat Simple_repeat 1 35 0 448 247 18 35 chr2 237450804 237451039 -13236815 + MLT1H LTR MaLR 250 547 -2 24 0 0 0 chr2 237451240 237451264 -13236590 + AT_rich Low_complexity Low_complexity 1 24 0 232 281 214 0 chr2 237452017 237452106 -13235748 + MIR SINE MIR 36 143 -119 1192 205 30 0 chr2 237452531 237452765 -13235089 - MIR SINE MIR -21 241 1 2608 145 54 5 chr2 237452791 237453197 -13234657 - MSTB LTR MaLR 0 426 1 240 330 11 60 chr2 237453328 237453510 -13234344 + MLT1J LTR MaLR 77 249 -262 2057 273 55 53 chr2 237453535 237454629 -13233225 + L1MEc LINE L1 1299 2365 -3850 2344 111 0 0 chr2 237454629 237454935 -13232919 + AluSg SINE Alu 1 306 -4 2057 273 55 53 chr2 237454935 237455230 -13232624 + L1MEc LINE L1 2365 2658 -3557 2254 219 31 35 chr2 237455287 237455972 -13231882 + L1M4 LINE L1 3896 4577 -1569 510 318 55 25 chr2 237456217 237456453 -13231401 - MIR SINE MIR -14 248 6 668 156 174 0 chr2 237456538 237456647 -13231207 + FLAM_A SINE Alu 1 128 -5 2603 62 0 0 chr2 237456649 237456956 -13230898 + AluY SINE Alu 1 307 -4 27 29 0 0 chr2 237457202 237457236 -13230618 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 237458368 237458389 -13229465 + AT_rich Low_complexity Low_complexity 1 21 0 687 328 105 35 chr2 237459180 237460017 -13227837 + L2 LINE L2 2419 3313 0 1543 208 3 3 chr2 237460220 237460514 -13227340 - AluJo SINE Alu -18 294 1 198 265 60 24 chr2 237461692 237461775 -13226079 - L2 LINE L2 -356 2916 2831 4639 93 17 0 chr2 237461776 237462370 -13225484 + L1PA10 LINE L1 5565 6168 0 216 154 0 0 chr2 237462382 237462421 -13225433 + MER5A DNA MER1_type 68 106 -83 313 339 59 69 chr2 237462729 237463473 -13224381 + L2 LINE L2 2534 3267 -5 588 297 72 56 chr2 237464546 237464833 -13223021 + L1ME LINE L1 20 320 -5750 3400 166 22 74 chr2 237464833 237465561 -13222293 + LTR8 LTR ERV1 2 691 0 588 297 72 56 chr2 237465561 237465772 -13222082 + L1ME LINE L1 320 526 -5544 266 358 167 25 chr2 237465884 237466046 -13221808 - L2 LINE L2 -1 3271 3087 232 263 75 12 chr2 237466087 237466167 -13221687 + MIR SINE MIR 106 190 -72 785 302 29 4 chr2 237466172 237466414 -13221440 - MIR SINE MIR -13 249 2 2112 101 0 7 chr2 237466434 237466720 -13221134 + AluSx SINE Alu 1 284 -28 260 200 0 0 chr2 237466742 237466787 -13221067 + L2 LINE L2 3210 3254 -18 189 0 0 0 chr2 237467266 237467287 -13220567 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2302 109 0 0 chr2 237467345 237467649 -13220205 + AluSq SINE Alu 5 308 -5 231 311 53 53 chr2 237468328 237468460 -13219394 - MIR3 SINE MIR -8 200 69 268 301 100 5 chr2 237468466 237468689 -13219165 - MIR SINE MIR -1 261 4 208 250 0 0 chr2 237469286 237469342 -13218512 + (TA)n Simple_repeat Simple_repeat 1 56 0 533 231 129 0 chr2 237470143 237470290 -13217564 + MIR SINE MIR 4 169 -93 2100 148 0 0 chr2 237470674 237470977 -13216877 - AluSx SINE Alu -7 305 3 294 329 191 14 chr2 237471344 237471763 -13216091 + L2 LINE L2 2202 2694 -620 672 269 43 16 chr2 237471830 237472049 -13215805 - MIR SINE MIR -3 259 35 298 304 13 0 chr2 237472321 237472400 -13215454 + L2 LINE L2 3174 3253 -19 21 0 0 0 chr2 237474581 237474602 -13213252 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 237475460 237475499 -13212355 + AT_rich Low_complexity Low_complexity 1 39 0 419 226 67 108 chr2 237475514 237475569 -13212285 - MIR SINE MIR -67 195 139 3084 63 5 8 chr2 237475569 237475952 -13211902 - L1PA11 LINE L1 -1 6173 5792 419 226 67 108 chr2 237475952 237476091 -13211763 - MIR SINE MIR -123 139 9 2111 153 0 0 chr2 237476204 237476512 -13211342 + AluSx SINE Alu 1 308 -4 461 254 89 42 chr2 237476909 237477145 -13210709 - L1MC5 LINE L1 -30 7931 7685 27 62 0 0 chr2 237477183 237477231 -13210623 + AT_rich Low_complexity Low_complexity 1 48 0 780 294 48 32 chr2 237479008 237479379 -13208475 + L2 LINE L2 2580 2956 -358 285 246 134 67 chr2 237480765 237480899 -13206955 + L2 LINE L2 3171 3313 0 207 299 75 28 chr2 237481206 237481313 -13206541 + L2 LINE L2 2257 2368 -946 955 219 48 5 chr2 237481358 237481568 -13206286 + MER20 DNA MER1_type 1 219 0 23 68 0 0 chr2 237482212 237482256 -13205598 + AT_rich Low_complexity Low_complexity 1 44 0 193 344 43 11 chr2 237483389 237483482 -13204372 + L2 LINE L2 3172 3267 -5 961 171 26 57 chr2 237483558 237483751 -13204103 + MER5A DNA MER1_type 1 187 -2 21 36 0 0 chr2 237484385 237484413 -13203441 + AT_rich Low_complexity Low_complexity 1 28 0 214 295 0 0 chr2 237485063 237485124 -13202730 + (TG)n Simple_repeat Simple_repeat 1 61 0 263 259 29 0 chr2 237485144 237485283 -13202571 + (TG)n Simple_repeat Simple_repeat 2 144 0 239 256 147 15 chr2 237485302 237485418 -13202436 - MIR SINE MIR -65 143 14 726 292 16 35 chr2 237485658 237485918 -13201936 - MIR SINE MIR -3 259 10 272 91 23 0 chr2 237486301 237486345 -13201509 + (GGA)n Simple_repeat Simple_repeat 2 46 0 209 210 16 0 chr2 237486781 237486843 -13201011 + GA-rich Low_complexity Low_complexity 1 63 0 2282 176 53 23 chr2 237487061 237487533 -13200321 + L1MB7 LINE L1 5699 6184 0 777 270 151 34 chr2 237487539 237487984 -13199870 + L2 LINE L2 2447 2943 -371 256 208 19 0 chr2 237487986 237488039 -13199815 - MLT1A1 LTR MaLR 0 457 404 * 1412 177 57 0 chr2 237488023 237488288 -13199566 - MLT1A1 LTR MaLR -85 280 1 415 313 52 5 chr2 237488306 237488498 -13199356 + L2 LINE L2 2946 3146 -167 682 197 22 7 chr2 237488576 237488713 -13199141 - MLT1-int LTR MaLR -641 730 592 401 136 0 12 chr2 237488724 237488805 -13199049 + (CA)n Simple_repeat Simple_repeat 2 81 0 557 277 29 7 chr2 237488829 237488966 -13198888 + L2 LINE L2 3172 3311 -2 274 305 71 50 chr2 237488978 237489119 -13198735 - MIR3 SINE MIR -60 148 5 1652 197 0 10 chr2 237489435 237489744 -13198110 - AluJo SINE Alu -6 306 1 228 287 30 69 chr2 237490202 237490303 -13197551 - L2 LINE L2 -9 3263 3167 329 242 0 0 chr2 237490438 237490504 -13197350 - L2 LINE L2 0 3272 3207 295 255 68 119 chr2 237490459 237490694 -13197160 - MIR SINE MIR -15 247 25 * 200 293 30 61 chr2 237490709 237490808 -13197046 + MIR SINE MIR 19 114 -148 2260 219 7 15 chr2 237490905 237491367 -13196487 - MLT1-int LTR MaLR 0 1735 1278 226 307 0 0 chr2 237491482 237491557 -13196297 - MLT1-int LTR MaLR -983 752 678 1889 204 20 24 chr2 237491614 237492056 -13195798 - MLT1-int LTR MaLR -484 887 355 2345 184 42 42 chr2 237492056 237492551 -13195303 - MLT2B1 LTR ERVL -25 495 1 15511 173 30 25 chr2 237493180 237495937 -13191917 + L1MA8 LINE L1 3508 6250 -1460 2208 122 3 0 chr2 237495937 237496240 -13191614 + AluSx SINE Alu 1 304 -8 15511 173 30 25 chr2 237496240 237496697 -13191157 + L1MA8 LINE L1 6250 6703 -1007 2295 110 3 0 chr2 237496697 237497006 -13190848 - AluY SINE Alu -1 310 1 15511 173 30 25 chr2 237497006 237497477 -13190377 + L1MA8 LINE L1 6703 7226 -484 1780 110 20 16 chr2 237497477 237497732 -13190122 - L1PB1 LINE L1 -1 6150 5895 15511 173 30 25 chr2 237497732 237498106 -13189748 + L1MA8 LINE L1 7226 7597 -113 24 32 0 0 chr2 237498563 237498594 -13189260 + AT_rich Low_complexity Low_complexity 1 31 0 9685 169 29 30 chr2 237498653 237500463 -13187391 + MER21-int LTR ERV1 2333 4140 -51 1786 185 3 6 chr2 237500504 237500817 -13187037 - AluJb SINE Alu 0 312 1 263 128 0 0 chr2 237500939 237500978 -13186876 + MER21A LTR ERV1 516 554 -377 2292 99 0 0 chr2 237500978 237501293 -13186561 - AluSx SINE Alu 0 315 1 21 0 0 0 chr2 237501405 237501426 -13186428 + AT_rich Low_complexity Low_complexity 1 21 0 399 294 147 0 chr2 237501808 237501951 -13185903 + MLT1J2 LTR MaLR 263 426 -24 378 0 0 0 chr2 237501951 237501993 -13185861 + (TG)n Simple_repeat Simple_repeat 2 43 0 2173 139 50 8 chr2 237502868 237503228 -13184626 - THE1C LTR MaLR 0 375 1 2715 42 3 0 chr2 237503295 237503607 -13184247 - L1PA5 LINE L1 -2 6152 5840 1995 154 3 0 chr2 237503645 237503950 -13183904 - MER7A DNA MER2_type 0 346 43 562 171 51 26 chr2 237503951 237504068 -13183786 - MER7A DNA MER2_type -227 119 2 685 295 82 18 chr2 237504481 237505147 -13182707 + L1ME LINE L1 4950 5703 -459 31 82 0 0 chr2 237505292 237505365 -13182489 + AT_rich Low_complexity Low_complexity 1 73 0 2469 50 0 0 chr2 237505373 237505699 -13182155 + AluY SINE Alu 1 326 0 341 283 60 140 chr2 237506173 237506305 -13181549 - L2 LINE L2 0 3272 3131 2156 135 0 3 chr2 237506305 237506617 -13181237 + AluSq SINE Alu 1 311 -2 341 283 60 140 chr2 237506617 237506971 -13180883 - L2 LINE L2 -141 3131 2825 383 318 154 23 chr2 237507180 237507608 -13180246 - L2 LINE L2 -649 2665 2182 2943 111 7 21 chr2 237508769 237508874 -13178980 + L1PB1 LINE L1 5725 5830 -321 2134 125 7 0 chr2 237508874 237509170 -13178684 + AluSx SINE Alu 1 298 -14 2943 111 7 21 chr2 237509170 237509496 -13178358 + L1PB1 LINE L1 5830 6150 -1 302 326 40 34 chr2 237511230 237511405 -13176449 - L1M4 LINE L1 -2201 3945 3770 24 0 0 0 chr2 237511784 237511808 -13176046 + AT_rich Low_complexity Low_complexity 1 24 0 2263 92 10 7 chr2 237512409 237512715 -13175139 - AluSx SINE Alu -5 307 1 934 163 0 0 chr2 237513435 237513588 -13174266 + FRAM SINE Alu 24 176 0 2593 51 0 16 chr2 237513599 237513910 -13173944 + AluSc SINE Alu 1 306 -3 975 301 81 43 chr2 237513962 237514443 -13173411 - L2 LINE L2 0 3313 2807 1091 217 28 5 chr2 237514443 237514655 -13173199 + MER20 DNA MER1_type 3 219 0 975 301 81 43 chr2 237514655 237514692 -13173162 - L2 LINE L2 -506 2807 2773 353 286 57 100 chr2 237515049 237515350 -13172504 - L2 LINE L2 -1 3312 3025 194 333 44 26 chr2 237516303 237516417 -13171437 - MIR SINE MIR -119 143 28 530 251 100 0 chr2 237519599 237519774 -13168080 - MIR SINE MIR -21 241 44 1875 162 36 41 chr2 237520055 237520444 -13167410 - MLT1B LTR MaLR 0 390 4 829 269 40 0 chr2 237520717 237520944 -13166910 - MIR SINE MIR -10 252 17 2009 125 0 7 chr2 237522376 237522663 -13165191 - AluSq SINE Alu -3 310 26 2179 144 24 12 chr2 237523228 237523561 -13164293 - MER1B DNA MER1_type 0 337 1 185 313 16 0 chr2 237525226 237525290 -13162564 - MIR SINE MIR -81 181 117 1496 201 28 14 chr2 237526499 237526788 -13161066 + AluJb SINE Alu 1 293 -19 4267 156 32 7 chr2 237528193 237528952 -13158902 + L1MB5 LINE L1 5397 6174 0 228 280 167 18 chr2 237529171 237529339 -13158515 + L2 LINE L2 1699 1891 -1423 4377 155 34 200 chr2 237529997 237531602 -13156252 + Charlie1a DNA MER1_type 1 1296 -1465 2220 117 0 7 chr2 237531602 237531909 -13155945 - AluSx SINE Alu -7 305 1 4377 155 34 200 chr2 237531909 237532045 -13155809 + Charlie1a DNA MER1_type 1296 1453 -2 2292 102 0 0 chr2 237532422 237532717 -13155137 - AluSx SINE Alu -17 295 1 290 230 325 0 chr2 237533839 237533965 -13153889 + MER5A DNA MER1_type 17 183 -6 399 340 35 40 chr2 237534158 237534358 -13153496 + MIR3 SINE MIR 3 201 -7 28 35 0 35 chr2 237534505 237534535 -13153319 + AT_rich Low_complexity Low_complexity 1 30 -25 1021 26 0 0 chr2 237534535 237534648 -13153206 - L1PA3 LINE L1 -5 6150 6038 28 35 0 35 chr2 237534648 237534674 -13153180 + AT_rich Low_complexity Low_complexity 30 55 0 1162 131 0 0 chr2 237535149 237535309 -13152545 - AluSp SINE Alu -24 289 130 479 138 81 0 chr2 237535325 237535412 -13152442 + L1MA8 LINE L1 6052 6145 -146 344 173 67 0 chr2 237535405 237535480 -13152374 - L1MA8 LINE L1 -64 6227 6148 * 1112 61 0 0 chr2 237535480 237535612 -13152242 - AluSp SINE Alu -181 132 1 261 327 48 10 chr2 237536438 237536542 -13151312 - L2 LINE L2 -13 3259 3152 289 222 78 22 chr2 237536706 237536796 -13151058 + L2 LINE L2 3173 3267 -5 725 168 8 0 chr2 237538112 237538237 -13149617 + MLT2D LTR ERVL 1 126 -288 1040 74 0 7 chr2 237538239 237538374 -13149480 - MER85 DNA T2_type -5 134 1 * 1106 200 34 29 chr2 237538374 237538644 -13149210 + MLT2D LTR ERVL 126 485 -35 328 136 50 7 chr2 237538647 237538787 -13149067 + (TA)n Simple_repeat Simple_repeat 1 146 0 180 208 28 42 chr2 237539255 237539327 -13148527 - L2 LINE L2 -1617 1697 1627 278 241 0 0 chr2 237539371 237539425 -13148429 + L3 LINE CR1 1489 1542 -35 180 0 0 0 chr2 237539549 237539569 -13148285 + (A)n Simple_repeat Simple_repeat 1 20 0 431 36 36 0 chr2 237539886 237539942 -13147912 + L1PA6 LINE L1 6097 6154 0 23 54 0 0 chr2 237540826 237540863 -13146991 + AT_rich Low_complexity Low_complexity 1 37 0 35 24 0 0 chr2 237541262 237541304 -13146550 + AT_rich Low_complexity Low_complexity 1 42 0 2329 96 0 3 chr2 237541304 237541607 -13146247 - AluSq SINE Alu -11 302 1 220 356 29 10 chr2 237541957 237542061 -13145793 + L3 LINE CR1 1394 1499 -78 2234 101 3 0 chr2 237542066 237542353 -13145501 + AluSx SINE Alu 1 288 -24 240 316 33 33 chr2 237542957 237543109 -13144745 + L2 LINE L2 2144 2295 -1019 2057 135 0 0 chr2 237543227 237543523 -13144331 + AluSx SINE Alu 1 296 -16 507 107 0 0 chr2 237543544 237543619 -13144235 + (CAGA)n Simple_repeat Simple_repeat 2 76 0 225 192 64 39 chr2 237544999 237545077 -13142777 + L1P LINE L1 4955 5034 -1112 3578 72 0 2 chr2 237545080 237545522 -13142332 + L1PA7 LINE L1 5707 6147 -7 346 369 66 0 chr2 237545546 237545790 -13142064 + L1M4 LINE L1 5023 5282 -864 24 32 0 0 chr2 237545985 237546016 -13141838 + AT_rich Low_complexity Low_complexity 1 31 0 1887 152 24 0 chr2 237546083 237546372 -13141482 - AluSx SINE Alu -16 296 1 2216 98 0 3 chr2 237546403 237546688 -13141166 + AluSg SINE Alu 1 284 -26 2085 136 0 0 chr2 237546771 237547066 -13140788 - AluSx SINE Alu -17 295 1 2089 103 3 3 chr2 237547268 237547579 -13140275 + AluSc SINE Alu 1 311 0 187 274 0 98 chr2 237547850 237547901 -13139953 - L2 LINE L2 -189 3083 3038 2178 117 0 0 chr2 237548125 237548416 -13139438 + AluSq SINE Alu 1 291 -22 2164 93 4 0 chr2 237548429 237548744 -13139110 + AluSg SINE Alu 5 320 0 2667 120 5 3 chr2 237549168 237549542 -13138312 + THE1C LTR MaLR 1 375 0 496 226 81 8 chr2 237550807 237550931 -13136923 + MER94 DNA DNA 1 133 -1 1562 164 48 15 chr2 237551049 237551183 -13136671 + AluJb SINE Alu 1 129 -183 2001 156 10 0 chr2 237551183 237551490 -13136364 + AluSx SINE Alu 1 310 -2 1562 164 48 15 chr2 237551490 237551623 -13136231 + AluJb SINE Alu 129 277 -35 953 98 7 0 chr2 237551623 237551766 -13136088 + (GAGAA)n Simple_repeat Simple_repeat 1 144 0 257 273 78 0 chr2 237552489 237552566 -13135288 + MARNA DNA Mariner 462 544 -42 356 285 53 68 chr2 237553070 237553257 -13134597 + MER5B DNA MER1_type 2 178 0 207 204 0 0 chr2 237554400 237554449 -13133405 + GA-rich Low_complexity Low_complexity 2 50 0 4614 93 2 3 chr2 237554574 237555174 -13132680 + L1PA13 LINE L1 5565 6163 0 184 222 86 49 chr2 237555531 237555612 -13132242 - L2 LINE L2 -277 3036 2953 334 336 25 0 chr2 237555631 237555753 -13132101 - L2 LINE L2 -470 2844 2720 524 313 183 9 chr2 237555787 237556126 -13131728 - L2 LINE L2 -791 2523 2126 263 304 36 9 chr2 237558540 237558652 -13129202 + MLT1J LTR MaLR 1 115 -396 387 307 200 13 chr2 237558718 237558943 -13128911 + MLT1J LTR MaLR 245 511 0 485 324 98 5 chr2 237559426 237559630 -13128224 + MIR SINE MIR 27 249 -13 691 149 28 0 chr2 237559630 237559922 -13127932 + (CAT)n Simple_repeat Simple_repeat 1 300 0 702 120 16 33 chr2 237559938 237560121 -13127733 + (CAT)n Simple_repeat Simple_repeat 1 180 0 762 133 22 22 chr2 237560158 237560338 -13127516 + (CAT)n Simple_repeat Simple_repeat 1 180 0 702 147 28 11 chr2 237560352 237560529 -13127325 + (CAT)n Simple_repeat Simple_repeat 1 180 0 774 149 22 22 chr2 237560546 237561096 -13126758 + (CAT)n Simple_repeat Simple_repeat 1 550 0 834 111 22 22 chr2 237561107 237561287 -13126567 + (CAT)n Simple_repeat Simple_repeat 1 180 0 795 103 5 46 chr2 237561298 237561521 -13126333 + (CAT)n Simple_repeat Simple_repeat 1 213 0 1629 191 50 9 chr2 237561562 237561903 -13125951 - MLT1A1 LTR MaLR 0 396 11 672 258 154 31 chr2 237563683 237564163 -13123691 + L2 LINE L2 2740 3304 -9 788 173 0 43 chr2 237564984 237565123 -13122731 - FLAM_A SINE Alu 0 133 1 833 165 0 0 chr2 237565508 237565635 -13122219 - FLAM_C SINE Alu -16 127 1 443 294 0 33 chr2 237565725 237565909 -13121945 + (TATG)n Simple_repeat Simple_repeat 1 178 0 1257 187 58 100 chr2 237565929 237566014 -13121840 + MER2 DNA MER2_type 1 88 -256 2066 130 3 7 chr2 237566014 237566315 -13121539 + AluSx SINE Alu 1 300 -12 1257 187 58 100 chr2 237566315 237566588 -13121266 + MER2 DNA MER2_type 88 344 0 706 264 172 36 chr2 237566956 237567124 -13120730 - L2 LINE L2 -4 3309 3165 2118 115 31 0 chr2 237567124 237567412 -13120442 + AluSq SINE Alu 1 297 -16 706 264 172 36 chr2 237567412 237568060 -13119794 - L2 LINE L2 -148 3165 2396 202 114 0 29 chr2 237569361 237569396 -13118458 + (GGAAA)n Simple_repeat Simple_repeat 3 36 0 200 355 0 0 chr2 237569743 237569805 -13118049 + L2 LINE L2 3242 3303 -10 577 288 62 65 chr2 237570862 237571431 -13116423 + L1ME4a LINE L1 5495 6061 -60 217 225 0 0 chr2 237571543 237571583 -13116271 + polypyrimidine Low_complexity Low_complexity 1 40 0 23 68 0 0 chr2 237571859 237571903 -13115951 + AT_rich Low_complexity Low_complexity 1 44 0 1626 124 120 8 chr2 237574158 237574425 -13113429 + AluSg SINE Alu 1 297 -13 24 0 0 0 chr2 237576189 237576213 -13111641 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr2 237578648 237578674 -13109180 + AT_rich Low_complexity Low_complexity 1 26 0 2202 103 0 0 chr2 237579422 237579712 -13108142 - AluY SINE Alu -21 290 1 2243 180 3 3 chr2 237579969 237580335 -13107519 - MER47A DNA MER2_type 0 366 1 180 218 23 115 chr2 237580983 237581070 -13106784 - MIR SINE MIR -58 204 126 1701 84 4 26 chr2 237581442 237581668 -13106186 + AluSc SINE Alu 21 241 -68 246 128 0 0 chr2 237581668 237581707 -13106147 + (A)n Simple_repeat Simple_repeat 1 39 0 221 231 120 19 chr2 237582019 237582127 -13105727 - MIR SINE MIR -134 128 10 2085 136 3 3 chr2 237582152 237582460 -13105394 + AluSx SINE Alu 1 308 -4 378 0 0 0 chr2 237583282 237583324 -13104530 + (A)n Simple_repeat Simple_repeat 1 42 0 180 0 0 0 chr2 237583370 237583390 -13104464 + (CCCCAA)n Simple_repeat Simple_repeat 4 23 0 219 229 0 33 chr2 237583627 237583688 -13104166 + L2 LINE L2 3214 3272 0 200 169 34 34 chr2 237584710 237584769 -13103085 + A-rich Low_complexity Low_complexity 1 59 0 1859 167 36 22 chr2 237587261 237587553 -13100301 + MLT1A1 LTR MaLR 1 300 -65 2360 161 84 0 chr2 237587553 237587945 -13099909 + MSTB LTR MaLR 1 425 -1 1859 167 36 22 chr2 237587945 237588012 -13099842 + MLT1A1 LTR MaLR 300 365 0 234 0 0 0 chr2 237588590 237588616 -13099238 + (CTG)n Simple_repeat Simple_repeat 3 28 0 487 287 75 27 chr2 237589953 237590388 -13097466 + L2 LINE L2 2762 3311 -2 2210 129 0 0 chr2 237591080 237591390 -13096464 + AluSg SINE Alu 1 310 0 185 313 45 0 chr2 237591656 237591723 -13096131 - L2 LINE L2 -8 3264 3195 324 0 0 0 chr2 237591726 237591762 -13096092 + (A)n Simple_repeat Simple_repeat 1 36 0 266 254 16 74 chr2 237591875 237591997 -13095857 - MIR SINE MIR -21 241 127 1040 265 45 45 chr2 237592024 237592058 -13095796 + L2 LINE L2 2758 2790 -523 2443 88 0 0 chr2 237592058 237592355 -13095499 - AluSq SINE Alu -16 297 1 1040 265 45 45 chr2 237592355 237592658 -13095196 + L2 LINE L2 2790 3091 -222 573 106 0 0 chr2 237592658 237592743 -13095111 - L1PA16 LINE L1 -1 6165 6081 1040 265 45 45 chr2 237592743 237592950 -13094904 + L2 LINE L2 3091 3306 -7 210 71 0 0 chr2 237592950 237592978 -13094876 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 606 256 0 0 chr2 237593721 237593901 -13093953 + (CA)n Simple_repeat Simple_repeat 1 180 0 313 309 89 49 chr2 237595098 237595221 -13092633 - L2 LINE L2 -17 3255 3128 192 264 75 38 chr2 237595580 237595686 -13092168 + MIR3 SINE MIR 94 203 -5 946 203 77 19 chr2 237596166 237596373 -13091481 - MER20 DNA MER1_type 0 219 1 239 311 0 0 chr2 237596668 237596729 -13091125 + GA-rich Low_complexity Low_complexity 2 62 0 376 285 73 13 chr2 237596766 237596917 -13090937 - MER5A DNA MER1_type -23 166 7 855 233 114 10 chr2 237596933 237597135 -13090719 + MER58A DNA MER1_type 2 224 0 333 268 124 7 chr2 237597776 237597929 -13089925 + MIR3 SINE MIR 34 204 -4 1434 288 173 19 chr2 237599004 237600078 -13087776 + L1ME3 LINE L1 3884 5130 -1016 1020 42 0 0 chr2 237600078 237600198 -13087656 + L1PA4 LINE L1 6035 6154 -1 1434 288 173 19 chr2 237600198 237600216 -13087638 + L1ME3 LINE L1 5130 5144 -1002 487 250 219 24 chr2 237600212 237600504 -13087350 + L1ME3 LINE L1 5764 6112 -50 * 230 143 0 0 chr2 237601096 237601138 -13086716 + L2 LINE L2 3267 3308 -5 1326 140 0 14 chr2 237602464 237602676 -13085178 + AluJb SINE Alu 86 291 -21 452 82 16 0 chr2 237603012 237603073 -13084781 + U7 snRNA snRNA 2 63 0 2127 112 0 3 chr2 237603384 237603671 -13084183 + AluSp SINE Alu 1 286 -27 506 299 119 0 chr2 237604049 237604243 -13083611 - MIR SINE MIR -2 260 44 241 246 58 53 chr2 237604245 237604416 -13083438 + L1M4 LINE L1 4584 4755 -1391 2187 121 3 0 chr2 237604518 237604816 -13083038 + AluSx SINE Alu 5 303 -9 846 258 77 5 chr2 237604986 237605195 -13082659 + MER58A DNA MER1_type 1 224 0 25 0 0 0 chr2 237605563 237605588 -13082266 + AT_rich Low_complexity Low_complexity 1 25 0 2371 103 0 0 chr2 237605714 237606016 -13081838 + AluSq SINE Alu 1 302 -11 1694 209 21 15 chr2 237606067 237606406 -13081448 + MER58B DNA MER1_type 1 341 0 2369 207 84 18 chr2 237607604 237608151 -13079703 + MER119 DNA MER1_type 1 583 0 261 281 90 56 chr2 237608434 237608574 -13079280 - MIR SINE MIR -61 147 21 351 298 66 20 chr2 237608829 237608980 -13078874 + MIR SINE MIR 30 187 -75 2578 30 0 10 chr2 237610668 237610964 -13076890 + L1PA4 LINE L1 5861 6153 -2 217 132 0 0 chr2 237610967 237611005 -13076849 + (TAAAAA)n Simple_repeat Simple_repeat 3 40 0 2291 104 3 0 chr2 237611903 237612201 -13075653 + AluSp SINE Alu 1 299 -14 2365 80 0 10 chr2 237612201 237612501 -13075353 + AluY SINE Alu 1 297 -14 199 263 213 44 chr2 237613359 237613519 -13074335 + MIR3 SINE MIR 17 203 -5 1797 150 10 38 chr2 237614445 237614758 -13073096 + AluJb SINE Alu 1 304 -8 1155 184 85 82 chr2 237615637 237615919 -13071935 + AluJo SINE Alu 8 290 -22 294 29 0 0 chr2 237615924 237615959 -13071895 + (CA)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr2 237616552 237616576 -13071278 + AT_rich Low_complexity Low_complexity 1 24 0 2059 190 15 13 chr2 237617453 237617842 -13070012 + MLT1B LTR MaLR 1 390 0 193 330 112 44 chr2 237617986 237618280 -13069574 + L2 LINE L2 2611 2924 -390 2346 53 0 4 chr2 237618577 237618886 -13068968 + AluY SINE Alu 1 308 0 2436 189 57 54 chr2 237618974 237619331 -13068523 + MER92B LTR ERV1 1 362 -274 1912 218 86 5 chr2 237619331 237619763 -13068091 + MLT1C LTR MaLR 1 467 0 2436 189 57 54 chr2 237619763 237620039 -13067815 + MER92B LTR ERV1 362 636 0 240 306 0 0 chr2 237620762 237620824 -13067030 - L3 LINE CR1 -4 1573 1512 21 57 0 0 chr2 237621257 237621292 -13066562 + AT_rich Low_complexity Low_complexity 1 35 0 208 111 37 37 chr2 237621778 237621832 -13066022 + T-rich Low_complexity Low_complexity 5 58 0 249 57 0 0 chr2 237622657 237622692 -13065162 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2419 70 0 0 chr2 237622694 237622992 -13064862 - AluY SINE Alu -13 298 1 236 321 28 18 chr2 237623687 237623796 -13064058 - MIR3 SINE MIR -18 190 81 778 231 125 84 chr2 237624659 237625227 -13062627 + MLT1G1 LTR MaLR 5 595 0 257 296 204 31 chr2 237625836 237626032 -13061822 + MIR SINE MIR 33 262 0 2028 129 0 7 chr2 237626967 237627297 -13060557 + AluSx SINE Alu 1 328 0 4074 103 20 0 chr2 237627421 237627967 -13059887 - L1PA16 LINE L1 -11 6155 5599 30 27 0 0 chr2 237628345 237628382 -13059472 + AT_rich Low_complexity Low_complexity 1 37 0 198 287 10 89 chr2 237628385 237628486 -13059368 + MIR3 SINE MIR 101 193 -15 588 202 0 0 chr2 237628568 237628677 -13059177 + MIR SINE MIR 97 205 -57 337 290 92 52 chr2 237629558 237629850 -13058004 + L1ME LINE L1 5287 5588 -582 22 0 0 0 chr2 237630232 237630254 -13057600 + AT_rich Low_complexity Low_complexity 1 22 0 381 75 0 0 chr2 237631020 237631073 -13056781 + (TTCC)n Simple_repeat Simple_repeat 4 56 0 216 0 0 0 chr2 237632135 237632159 -13055695 + (A)n Simple_repeat Simple_repeat 1 24 0 695 219 15 153 chr2 237632592 237632866 -13054988 - MIR SINE MIR -6 256 21 185 395 110 0 chr2 237633271 237633380 -13054474 - MIR3 SINE MIR -48 160 40 761 251 104 28 chr2 237633457 237633744 -13054110 + MLT1J1 LTR MaLR 21 329 -117 1819 202 59 15 chr2 237634139 237634545 -13053309 - MER63B DNA MER1_type -1 435 12 1211 219 63 58 chr2 237634886 237635284 -13052570 + L1M4 LINE L1 4546 4945 -1201 184 285 120 57 chr2 237635725 237635883 -13051971 + MER5A DNA MER1_type 1 168 -21 2269 106 3 0 chr2 237636024 237636327 -13051527 - AluSx SINE Alu -8 304 1 243 377 50 44 chr2 237637507 237638170 -13049684 - L2 LINE L2 -2047 1267 601 231 356 10 19 chr2 237639542 237639646 -13048208 - L3 LINE CR1 -453 1124 1022 1408 168 57 32 chr2 237639715 237639995 -13047859 + AluJb SINE Alu 1 287 -25 268 173 39 0 chr2 237640041 237640093 -13047761 + MIR SINE MIR 75 128 -134 782 231 41 58 chr2 237640246 237640515 -13047339 + MIR SINE MIR 1 258 -4 1050 49 0 0 chr2 237640923 237641046 -13046808 - L1MA2 LINE L1 0 6304 6182 1940 105 14 25 chr2 237641108 237641394 -13046460 - AluSx SINE Alu -3 309 27 1357 167 70 39 chr2 237641806 237642063 -13045791 - AluJo SINE Alu -30 282 18 352 174 151 0 chr2 237642341 237642427 -13045427 + MER94 DNA DNA 1 99 -35 294 235 108 20 chr2 237642507 237642609 -13045245 - L2 LINE L2 0 3272 3162 609 252 175 13 chr2 237643482 237643660 -13044194 - L2 LINE L2 -19 3294 3146 2233 88 0 3 chr2 237643660 237643943 -13043911 + AluSc SINE Alu 1 282 -27 195 69 0 0 chr2 237643943 237643972 -13043882 + (CATA)n Simple_repeat Simple_repeat 2 30 0 609 252 175 13 chr2 237643972 237644101 -13043753 - L2 LINE L2 -166 3147 2936 689 298 82 47 chr2 237644203 237644716 -13043138 + L1ME4a LINE L1 5521 6051 -70 242 270 81 27 chr2 237645004 237645078 -13042776 + L2 LINE L2 3175 3252 -20 201 171 73 0 chr2 237645989 237646030 -13041824 + CT-rich Low_complexity Low_complexity 3 46 0 853 183 144 0 chr2 237646190 237646370 -13041484 + MER63A DNA MER1_type 1 206 -4 2518 56 7 3 chr2 237646568 237646870 -13040984 + AluY SINE Alu 3 305 -6 306 320 0 10 chr2 237647991 237648091 -13039763 + LTR67 LTR ERVL 459 557 0 219 297 87 65 chr2 237648962 237649147 -13038707 + MIR SINE MIR 20 208 -54 180 0 0 0 chr2 237650738 237650758 -13037096 + (TTA)n Simple_repeat Simple_repeat 3 22 0 2161 64 11 4 chr2 237650758 237651024 -13036830 - L1PA5 LINE L1 -18 6136 5869 1415 25 0 0 chr2 237651025 237651186 -13036668 + L1P2 LINE L1 5595 5755 -400 31 58 0 0 chr2 237652010 237652062 -13035792 + AT_rich Low_complexity Low_complexity 1 52 0 1105 211 75 106 chr2 237652398 237652915 -13034939 + MLT1D LTR MaLR 5 505 0 511 232 68 62 chr2 237653014 237653191 -13034663 + MIR SINE MIR 15 192 -70 3241 166 64 3 chr2 237653614 237653759 -13034095 - L1MA9 LINE L1 0 6312 6177 243 0 0 0 chr2 237653759 237653786 -13034068 + (TG)n Simple_repeat Simple_repeat 1 27 0 3241 166 64 3 chr2 237653786 237654235 -13033619 - L1MA9 LINE L1 -135 6177 5682 215 227 0 0 chr2 237655327 237655371 -13032483 - L2 LINE L2 0 3313 3270 21 0 0 0 chr2 237655645 237655666 -13032188 + AT_rich Low_complexity Low_complexity 1 21 0 2918 82 11 3 chr2 237656909 237657289 -13030565 - L1PA13 LINE L1 -19 6144 5762 210 294 137 10 chr2 237657831 237657933 -13029921 + L2 LINE L2 3185 3299 -14 765 265 150 0 chr2 237659143 237659343 -13028511 - MIR SINE MIR -20 242 13 685 206 0 0 chr2 237660601 237660727 -13027127 - AluSg/x SINE Alu -12 300 175 823 146 0 23 chr2 237661134 237661264 -13026590 + FLAM_C SINE Alu 1 127 -16 268 323 71 18 chr2 237661375 237661504 -13026350 - MIR SINE MIR -35 173 39 345 189 0 0 chr2 237665192 237665282 -13022572 + (TA)n Simple_repeat Simple_repeat 1 90 0 229 65 0 0 chr2 237665303 237665349 -13022505 + LTR66 LTR ERVL 394 439 -171 6445 53 5 0 chr2 237665353 237666129 -13021725 + L1PA7 LINE L1 5352 6131 -23 228 185 0 0 chr2 237666130 237666184 -13021670 + (TA)n Simple_repeat Simple_repeat 1 54 0 2477 84 14 3 chr2 237666188 237666534 -13021320 - L1P LINE L1 -1495 4651 4302 889 197 24 29 chr2 237667470 237667678 -13020176 + MER3 DNA MER1_type 3 209 0 257 217 119 42 chr2 237667713 237667856 -13019998 + L1ME4a LINE L1 5967 6120 -1 705 245 191 44 chr2 237668045 237668428 -13019426 + L2 LINE L2 2871 3309 -4 326 285 50 55 chr2 237668503 237668703 -13019151 + MIR SINE MIR 63 261 -1 543 209 205 47 chr2 237668816 237669149 -13018705 - MLT1G1 LTR MaLR -2 593 205 255 227 0 38 chr2 237669157 237669397 -13018457 + GA-rich Low_complexity Low_complexity 1 230 0 619 252 60 60 chr2 237669457 237669675 -13018179 - MLT1G1 LTR MaLR -362 233 16 1174 257 76 41 chr2 237670556 237671043 -13016811 + LTR33 LTR ERVL 14 517 -4 2150 117 0 17 chr2 237671053 237671352 -13016502 - AluSx SINE Alu -18 294 1 187 264 77 66 chr2 237673033 237673124 -13014730 + MIR SINE MIR 15 106 -156 221 254 15 15 chr2 237677629 237677696 -13010158 - L2 LINE L2 -4 3309 3243 697 222 111 26 chr2 237677824 237678013 -13009841 + MER63A DNA MER1_type 5 209 -1 351 0 0 0 chr2 237678601 237678640 -13009214 + (CA)n Simple_repeat Simple_repeat 2 40 0 28 48 0 0 chr2 237678658 237678700 -13009154 + AT_rich Low_complexity Low_complexity 1 42 0 2286 114 0 0 chr2 237679339 237679646 -13008208 + AluSx SINE Alu 1 307 -5 26 30 0 0 chr2 237679798 237679831 -13008023 + AT_rich Low_complexity Low_complexity 1 33 0 375 273 59 64 chr2 237679887 237680074 -13007780 - MIR SINE MIR -1 261 76 211 214 0 0 chr2 237680301 237680343 -13007511 + A-rich Low_complexity Low_complexity 2 43 0 507 148 0 0 chr2 237680379 237680467 -13007387 + (ATG)n Simple_repeat Simple_repeat 2 89 0 184 154 0 51 chr2 237680475 237680514 -13007340 - MIR SINE MIR -31 231 195 254 261 58 0 chr2 237680693 237680762 -13007092 - L2 LINE L2 -14 3258 3186 507 136 0 0 chr2 237680875 237680985 -13006869 + (TG)n Simple_repeat Simple_repeat 2 111 0 250 276 23 35 chr2 237681007 237681094 -13006760 - L2 LINE L2 -218 3054 2969 195 341 188 7 chr2 237681124 237681400 -13006454 + L2 LINE L2 2057 2382 -932 180 318 0 30 chr2 237682173 237682239 -13005615 - L2 LINE L2 -69 3203 3140 * 193 324 9 67 chr2 237682217 237682322 -13005532 + MIR SINE MIR 163 261 -1 401 343 116 24 chr2 237682473 237682887 -13004967 - L2 LINE L2 -1 3271 2820 655 294 85 29 chr2 237683876 237684034 -13003820 - L1ME4a LINE L1 -287 5834 5686 2314 108 0 7 chr2 237684034 237684339 -13003515 - AluSx SINE Alu -9 303 1 655 294 85 29 chr2 237684339 237684486 -13003368 - L1ME4a LINE L1 -435 5686 5512 3312 88 30 0 chr2 237685490 237685931 -13001923 + L1PA10 LINE L1 5710 6163 -5 181 363 113 8 chr2 237686516 237686640 -13001214 - MIR3 SINE MIR -9 199 63 449 247 58 46 chr2 237686867 237687041 -13000813 - MER5B DNA MER1_type -1 177 2 193 292 92 0 chr2 237687139 237687204 -13000650 + MIR SINE MIR 65 135 -73 379 249 70 84 chr2 237687372 237687585 -13000269 - L2 LINE L2 0 3313 3104 237 327 56 0 chr2 237688020 237688127 -12999727 - L1M4 LINE L1 -3923 2223 2111 299 276 29 53 chr2 237688373 237688543 -12999311 + L1M4 LINE L1 2148 2313 -3833 1310 275 93 17 chr2 237688553 237688971 -12998883 + MLT1K LTR MaLR 139 588 0 34 24 0 0 chr2 237689652 237689693 -12998161 + AT_rich Low_complexity Low_complexity 1 41 0 226 265 126 80 chr2 237689721 237689789 -12998065 + MIR SINE MIR 50 113 -149 2989 85 5 11 chr2 237689789 237690164 -12997690 + THE1C LTR MaLR 1 373 -2 11031 110 43 10 chr2 237690166 237691695 -12996159 + THE1C-int LTR MaLR 1 1580 0 2441 108 93 3 chr2 237691695 237692039 -12995815 + THE1C LTR MaLR 1 375 0 226 265 126 80 chr2 237692039 237692117 -12995737 + MIR SINE MIR 112 207 -55 212 306 102 10 chr2 237692309 237692407 -12995447 + MIR3 SINE MIR 91 197 -11 183 42 0 0 chr2 237692696 237692720 -12995134 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 323 305 38 23 chr2 237693173 237693304 -12994550 + MIR3 SINE MIR 45 177 -31 3409 172 38 2 chr2 237693694 237694271 -12993583 + L1MB5 LINE L1 5569 6166 -8 1706 142 3 72 chr2 237694681 237695013 -12992841 + AluJo SINE Alu 1 309 -3 25 0 0 0 chr2 237695491 237695516 -12992338 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 237696053 237696074 -12991780 + AT_rich Low_complexity Low_complexity 1 21 0 1760 177 3 3 chr2 237696139 237696439 -12991415 - AluJb SINE Alu -12 300 1 296 314 28 2 chr2 237696937 237697043 -12990811 + L1ME4a LINE L1 5508 5614 -507 315 0 0 0 chr2 237697058 237697093 -12990761 + (TG)n Simple_repeat Simple_repeat 2 36 0 1235 135 0 0 chr2 237697111 237697281 -12990573 - AluSg/x SINE Alu -14 298 129 334 244 90 119 chr2 237697294 237697406 -12990448 + L1ME4a LINE L1 5725 5839 -282 2027 65 101 25 chr2 237697406 237697682 -12990172 + AluY SINE Alu 1 297 -14 334 244 90 119 chr2 237697682 237697881 -12989973 + L1ME4a LINE L1 5839 6027 -94 675 118 204 7 chr2 237698130 237698282 -12989572 + MER53 DNA DNA 2 183 -6 2006 135 0 4 chr2 237699026 237699307 -12988547 + AluJb SINE Alu 1 280 -32 2524 59 0 0 chr2 237699409 237699713 -12988141 + AluY SINE Alu 1 304 -7 2949 204 99 52 chr2 237699836 237700370 -12987484 + L1ME2 LINE L1 4663 5171 -993 1834 165 6 25 chr2 237700370 237700685 -12987169 + AluJb SINE Alu 1 309 -3 2949 204 99 52 chr2 237700685 237701585 -12986269 + L1ME2 LINE L1 5171 6163 -1 220 298 58 19 chr2 237702362 237702466 -12985388 + MIR SINE MIR 2 109 -153 1113 194 18 60 chr2 237702992 237703042 -12984812 - MER58B DNA MER1_type -2082 338 287 1737 175 0 39 chr2 237703042 237703350 -12984504 + AluSx SINE Alu 1 296 -16 1113 194 18 60 chr2 237703350 237703519 -12984335 - MER58B DNA MER1_type -2133 287 131 883 146 0 15 chr2 237703519 237703649 -12984205 - FLAM_C SINE Alu -5 128 1 1113 194 18 60 chr2 237703649 237703712 -12984142 - MER58B DNA MER1_type -2289 131 67 1957 124 9 67 chr2 237703778 237704108 -12983746 - AluSx SINE Alu -1 311 1 336 223 188 32 chr2 237704669 237704859 -12982995 - MIR SINE MIR -31 231 5 662 198 34 62 chr2 237705031 237705208 -12982646 + MER5B DNA MER1_type 7 178 0 242 331 51 2 chr2 237706077 237706205 -12981649 - MIR SINE MIR -65 143 33 255 93 0 0 chr2 237706235 237706278 -12981576 + (TG)n Simple_repeat Simple_repeat 2 44 0 1686 143 20 7 chr2 237756415 237756709 -12931145 + AluSx SINE Alu 6 303 -9 2581 53 0 3 chr2 237756710 237757013 -12930841 + AluY SINE Alu 2 303 -8 2235 120 0 0 chr2 237757013 237757314 -12930540 + AluSx SINE Alu 1 301 -11 1511 200 13 13 chr2 237757385 237757685 -12930169 + AluJo SINE Alu 1 300 -12 2258 82 0 63 chr2 237759659 237759977 -12927877 + AluSx SINE Alu 1 298 -14 1379 139 9 5 chr2 237761234 237761457 -12926397 - AluJb SINE Alu -9 303 80 1260 179 111 79 chr2 237761914 237762356 -12925498 - LTR37B LTR ERV1 -7 461 6 373 312 148 11 chr2 237763008 237763197 -12924657 + MIR SINE MIR 37 251 -11 2093 117 3 17 chr2 237763291 237763591 -12924263 + AluSx SINE Alu 1 296 -16 293 298 167 20 chr2 237764056 237764254 -12923600 - MIR SINE MIR -5 257 31 775 205 0 24 chr2 237764889 237765068 -12922786 - MER7A DNA MER2_type -174 172 1 1306 234 13 13 chr2 237765070 237765374 -12922480 - AluJb SINE Alu -8 304 1 2174 121 0 13 chr2 237765519 237765824 -12922030 + AluSx SINE Alu 1 301 -11 1907 124 21 14 chr2 237765944 237766234 -12921620 - AluSx SINE Alu -20 292 1 381 331 53 0 chr2 237766909 237767078 -12920776 + MIR SINE MIR 23 200 -62 820 154 0 46 chr2 237767080 237767210 -12920644 + FLAM_A SINE Alu 1 124 -9 679 146 10 0 chr2 237767257 237767353 -12920501 - AluJb SINE Alu -18 294 198 1670 148 16 0 chr2 237767353 237767603 -12920251 + AluJb SINE Alu 58 311 -1 1421 138 52 4 chr2 237767648 237767879 -12919975 - MSTA LTR MaLR 0 428 187 1256 139 5 19 chr2 237767882 237768091 -12919763 - AluJb SINE Alu -1 311 106 1739 156 80 0 chr2 237768400 237768689 -12919165 - AluSx SINE Alu 0 312 1 1254 134 0 5 chr2 237769101 237769287 -12918567 + AluSp SINE Alu 120 304 -9 315 333 72 14 chr2 237769519 237769657 -12918197 - L2 LINE L2 -2 3270 3125 2173 105 16 7 chr2 237769658 237769963 -12917891 + AluSq SINE Alu 1 308 -5 1775 179 0 7 chr2 237770339 237770635 -12917219 + AluJb SINE Alu 1 294 -18 278 274 44 26 chr2 237770783 237770896 -12916958 - MER104 DNA Tc2 0 180 66 2212 117 0 0 chr2 237770965 237771264 -12916590 + AluSx SINE Alu 1 299 -13 1772 149 10 7 chr2 237771437 237771738 -12916116 + AluJb SINE Alu 2 303 -9 1829 168 124 24 chr2 237772119 237772531 -12915323 + MLT1C LTR MaLR 1 453 -14 2368 88 0 0 chr2 237772810 237773117 -12914737 + AluY SINE Alu 1 307 -4 383 267 67 33 chr2 237773310 237773371 -12914483 + MLT1J LTR MaLR 8 65 -446 2171 114 7 0 chr2 237773371 237773668 -12914186 + AluSx SINE Alu 1 299 -13 383 267 67 33 chr2 237773668 237773756 -12914098 + MLT1J LTR MaLR 65 162 -349 218 206 0 48 chr2 237773961 237774024 -12913830 + T-rich Low_complexity Low_complexity 3 62 0 410 306 119 18 chr2 237774756 237774975 -12912879 + MLT1K LTR MaLR 342 582 -6 2274 115 128 18 chr2 237775453 237775837 -12912017 + MSTA LTR MaLR 3 428 0 2544 62 0 3 chr2 237776221 237776526 -12911328 - AluY SINE Alu -7 304 1 194 62 31 0 chr2 237776926 237776958 -12910896 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1776 137 4 4 chr2 237776963 237777240 -12910614 - AluSx SINE Alu -35 277 1 2272 106 3 0 chr2 237777375 237777678 -12910176 + AluSq SINE Alu 1 304 -9 195 274 161 16 chr2 237777949 237778073 -12909781 + L2 LINE L2 2915 3056 -216 253 270 32 0 chr2 237778417 237778480 -12909374 + L2 LINE L2 3208 3272 0 2345 104 0 3 chr2 237778519 237778828 -12909026 + AluSq SINE Alu 1 308 -5 300 317 188 28 chr2 237779281 237779606 -12908248 - L2 LINE L2 -764 2550 2174 1710 172 34 20 chr2 237779759 237780056 -12907798 - AluJb SINE Alu -8 304 4 2243 97 13 10 chr2 237780087 237780397 -12907457 - AluSx SINE Alu -1 311 1 786 183 179 17 chr2 237781667 237781907 -12905947 + LTR54B LTR ERV1 2 280 -218 2294 106 0 0 chr2 237781907 237782210 -12905644 + AluSq SINE Alu 1 303 -10 2136 103 0 0 chr2 237782218 237782527 -12905327 + AluY SINE Alu 1 309 0 1208 134 0 0 chr2 237782527 237782698 -12905156 + AluSg/x SINE Alu 134 304 -8 660 200 86 19 chr2 237782698 237782908 -12904946 + LTR54B LTR ERV1 273 496 -2 2354 96 0 0 chr2 237783003 237783305 -12904549 - AluSg SINE Alu -8 302 1 2159 74 20 0 chr2 237783505 237783801 -12904053 - AluY SINE Alu -8 303 2 297 0 0 0 chr2 237783880 237783913 -12903941 + (TG)n Simple_repeat Simple_repeat 2 34 0 370 247 73 90 chr2 237784124 237784227 -12903627 - L1ME LINE L1 -456 5665 5562 1220 255 88 51 chr2 237784227 237784319 -12903535 - MLT1J LTR MaLR -3 508 421 2213 97 0 3 chr2 237784319 237784607 -12903247 + AluSg SINE Alu 1 287 -23 207 0 0 0 chr2 237784610 237784633 -12903221 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1220 255 88 51 chr2 237784633 237785026 -12902828 - MLT1J LTR MaLR -91 420 1 370 247 73 90 chr2 237785026 237785100 -12902754 - L1ME LINE L1 -559 5562 5491 33 56 0 0 chr2 237787073 237787127 -12900727 + AT_rich Low_complexity Low_complexity 1 54 0 328 133 33 17 chr2 237787171 237787231 -12900623 - MER66A LTR ERV1 -139 339 279 761 10 0 68 chr2 237787309 237787412 -12900442 - AluSc SINE Alu 0 309 214 965 19 0 0 chr2 237787412 237787518 -12900336 - AluSc SINE Alu -203 106 1 2194 103 0 7 chr2 237787565 237787867 -12899987 - AluSx SINE Alu -12 300 1 1808 73 8 27 chr2 237788243 237788502 -12899352 - AluY SINE Alu -13 298 45 199 70 23 23 chr2 237788562 237788605 -12899249 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 939 150 0 0 chr2 237789480 237789613 -12898241 + FLAM_C SINE Alu 1 133 0 1961 123 0 4 chr2 237789633 237789901 -12897953 + AluSx SINE Alu 15 281 -31 198 0 0 0 chr2 237789904 237789926 -12897928 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1945 130 49 0 chr2 237789935 237790220 -12897634 + AluSx SINE Alu 1 299 -13 746 164 0 8 chr2 237790328 237790450 -12897404 - AluSg/x SINE Alu -10 300 180 2065 107 34 3 chr2 237790741 237791039 -12896815 - AluSq SINE Alu -2 311 5 2150 124 16 0 chr2 237791186 237791493 -12896361 + AluSx SINE Alu 1 312 0 2256 90 0 17 chr2 237792164 237792485 -12895369 + AluSx SINE Alu 1 312 0 1979 121 0 51 chr2 237796242 237796557 -12891297 - AluSq SINE Alu -14 299 1 21 71 0 0 chr2 237797183 237797225 -12890629 + AT_rich Low_complexity Low_complexity 1 42 0 414 0 0 0 chr2 237797703 237797749 -12890105 + (CA)n Simple_repeat Simple_repeat 1 46 0 2030 140 0 0 chr2 237797925 237798211 -12889643 + AluSx SINE Alu 1 286 -26 26 0 0 0 chr2 237798211 237798237 -12889617 + AT_rich Low_complexity Low_complexity 1 26 0 517 185 149 36 chr2 237799111 237799306 -12888548 - Charlie1 DNA MER1_type -16 2745 2529 1839 98 4 8 chr2 237799306 237799552 -12888302 - AluSx SINE Alu -67 245 1 398 133 0 17 chr2 237799630 237799690 -12888164 - Tigger2 DNA MER2_type -2659 59 1 1272 241 72 17 chr2 237799708 237800053 -12887801 - Charlie1a DNA MER1_type -1090 365 2 1363 196 47 50 chr2 237800062 237800404 -12887450 - MER58B DNA MER1_type 0 341 1 1953 137 0 3 chr2 237800520 237800827 -12887027 + AluSx SINE Alu 1 306 0 586 288 58 52 chr2 237801318 237801950 -12885904 + L1MC5 LINE L1 786 1421 -4975 433 134 134 37 chr2 237801969 237802051 -12885803 - AluSc SINE Alu -17 292 203 2281 96 3 10 chr2 237802054 237802367 -12885487 + AluY SINE Alu 1 311 0 495 248 10 0 chr2 237802382 237802483 -12885371 + FLAM_A SINE Alu 14 115 -27 288 299 160 42 chr2 237802502 237802927 -12884927 + L1MC5 LINE L1 1630 2104 -4292 894 249 153 88 chr2 237802954 237804079 -12883775 + L1MC5 LINE L1 5530 6844 -1186 2172 111 85 20 chr2 237804079 237804431 -12883423 - THE1C LTR MaLR 0 375 1 894 249 153 88 chr2 237804431 237805060 -12882794 + L1MC5 LINE L1 6844 7430 -600 2400 163 63 5 chr2 237805206 237805648 -12882206 - Tigger3b DNA MER2_type -1 1230 763 2144 132 0 0 chr2 237805661 237805956 -12881898 + AluY SINE Alu 1 295 -16 286 135 0 19 chr2 237806098 237806150 -12881704 + AluJo SINE Alu 86 134 -168 1569 166 35 18 chr2 237806151 237806435 -12881419 + AluJo SINE Alu 3 291 -21 2132 122 7 0 chr2 237806552 237806847 -12881007 + AluSx SINE Alu 1 297 -15 22 35 0 0 chr2 237807161 237807190 -12880664 + AT_rich Low_complexity Low_complexity 1 29 0 361 330 28 28 chr2 237807457 237807633 -12880221 + MIR3 SINE MIR 15 190 -18 2170 111 0 3 chr2 237807647 237807935 -12879919 + AluSg SINE Alu 6 292 -18 998 170 0 12 chr2 237808004 237808169 -12879685 - FRAM SINE Alu -16 160 1 2184 105 10 29 chr2 237808184 237808322 -12879532 + AluSg SINE Alu 1 140 -170 2162 116 3 0 chr2 237808322 237808614 -12879240 + AluSp SINE Alu 1 293 -20 2184 105 10 29 chr2 237808614 237808789 -12879065 + AluSg SINE Alu 140 308 -2 204 40 0 0 chr2 237808825 237808850 -12879004 + (TTTTC)n Simple_repeat Simple_repeat 4 28 0 2155 104 3 13 chr2 237808871 237809169 -12878685 + AluSg SINE Alu 1 295 -15 1720 123 41 19 chr2 237809199 237809467 -12878387 + AluSq SINE Alu 1 274 -39 221 263 186 32 chr2 237809513 237809662 -12878192 + MIR SINE MIR 74 249 -13 494 220 46 0 chr2 237809662 237809771 -12878083 + FLAM_A SINE Alu 1 114 -19 2257 107 0 0 chr2 237809780 237810069 -12877785 - AluSx SINE Alu -23 289 1 1124 119 12 0 chr2 237810253 237810421 -12877433 + AluSg/x SINE Alu 140 309 -1 1949 150 70 28 chr2 237810421 237810847 -12877007 - Tigger3b DNA MER2_type -483 748 305 1082 71 97 77 chr2 237810862 237811058 -12876796 - MER30 DNA MER1_type -30 200 1 506 238 0 0 chr2 237811105 237811206 -12876648 - Tigger3b DNA MER2_type -1130 101 1 281 252 56 19 chr2 237811207 237811314 -12876540 + L1MC5 LINE L1 7749 7859 -102 2098 109 18 0 chr2 237811602 237811887 -12875967 + AluSx SINE Alu 1 290 -22 412 191 110 22 chr2 237811899 237812035 -12875819 - MER115 DNA AcHobo -34 659 512 2137 135 0 0 chr2 237812779 237813083 -12874771 + AluSx SINE Alu 1 304 -8 1050 79 0 0 chr2 237813371 237813510 -12874344 + MER85 DNA T2_type 1 139 0 23 33 0 0 chr2 237813620 237813650 -12874204 + AT_rich Low_complexity Low_complexity 1 30 0 812 205 197 35 chr2 237814505 237814759 -12873095 + AluSc SINE Alu 1 295 -4 208 135 0 0 chr2 237814978 237815015 -12872839 + (T)n Simple_repeat Simple_repeat 1 37 0 944 206 52 5 chr2 237815310 237815504 -12872350 + MER58A DNA MER1_type 4 206 -18 466 278 101 6 chr2 237815696 237815865 -12871989 - MIR SINE MIR -59 203 19 1878 153 7 7 chr2 237816397 237816691 -12871163 - AluJb SINE Alu -10 302 9 2018 145 3 0 chr2 237817590 237817893 -12869961 + AluSq SINE Alu 1 304 -9 205 157 20 78 chr2 237818131 237818182 -12869672 - MIR SINE MIR -101 161 114 488 268 39 54 chr2 237818604 237818809 -12869045 + MIR SINE MIR 60 261 -1 2006 117 4 0 chr2 237820465 237820730 -12867124 + AluSx SINE Alu 1 266 -46 21 0 0 0 chr2 237820894 237820915 -12866939 + AT_rich Low_complexity Low_complexity 1 21 0 1865 172 18 6 chr2 237822165 237822508 -12865346 + MER7A DNA MER2_type 1 345 -1 2465 72 0 7 chr2 237822508 237822812 -12865042 + AluY SINE Alu 1 302 -9 31 0 0 0 chr2 237823501 237823532 -12864322 + AT_rich Low_complexity Low_complexity 1 31 0 2066 104 0 0 chr2 237823535 237823813 -12864041 + AluSq SINE Alu 4 281 -32 212 0 36 0 chr2 237823815 237823843 -12864011 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 31 26 0 0 chr2 237825528 237825566 -12862288 + AT_rich Low_complexity Low_complexity 1 38 0 410 247 25 5 chr2 237826001 237826150 -12861704 - L1ME1 LINE L1 -16 6148 5996 369 198 0 0 chr2 237826155 237826236 -12861618 + CT-rich Low_complexity Low_complexity 4 84 0 674 180 31 8 chr2 237826557 237826685 -12861169 + FLAM_C SINE Alu 1 131 -12 1409 199 40 40 chr2 237826709 237827010 -12860844 + AluJo SINE Alu 1 301 -11 21 0 0 0 chr2 237827333 237827354 -12860500 + AT_rich Low_complexity Low_complexity 1 21 0 568 266 133 5 chr2 237828446 237828634 -12859220 + MER58C DNA MER1_type 1 212 -3 1422 149 97 59 chr2 237828856 237829144 -12858710 + AluJo SINE Alu 1 299 -13 3006 160 26 17 chr2 237829168 237829748 -12858106 + Tigger1 DNA MER2_type 1834 2418 0 21 0 0 0 chr2 237829774 237829795 -12858059 + AT_rich Low_complexity Low_complexity 1 21 0 291 248 10 30 chr2 237829985 237830086 -12857768 + L1ME4a LINE L1 5685 5783 -338 185 333 37 12 chr2 237830396 237830477 -12857377 + MIR SINE MIR 171 253 -9 1572 273 101 64 chr2 237830533 237831747 -12856107 + HAL1 LINE L1 3 1261 -1246 379 264 18 9 chr2 237831753 237831863 -12855991 - MER81 DNA DNA -3 111 1 486 243 120 51 chr2 237831894 237832170 -12855684 + HAL1 LINE L1 1515 1809 -698 314 275 133 40 chr2 237832247 237832549 -12855305 + HAL1 LINE L1 1953 2282 -225 1356 182 0 45 chr2 237832693 237832940 -12854914 + AluJo SINE Alu 1 236 -76 306 296 67 22 chr2 237833032 237833167 -12854687 + L1ME4a LINE L1 5975 6115 -6 3998 119 208 89 chr2 237833641 237835052 -12852802 + pTR5 LTR ERV1 735 2438 0 31 26 0 0 chr2 237835538 237835576 -12852278 + AT_rich Low_complexity Low_complexity 1 38 0 305 300 61 72 chr2 237836347 237836527 -12851327 - L3 LINE CR1 -148 1429 1252 1690 124 16 4 chr2 237836534 237836792 -12851062 + AluSq SINE Alu 45 305 -8 234 0 0 0 chr2 237836792 237836818 -12851036 + (CATA)n Simple_repeat Simple_repeat 2 27 0 1176 191 72 4 chr2 237837168 237837404 -12850450 - L1PB4 LINE L1 -9 6147 5896 314 264 253 11 chr2 237837552 237837730 -12850124 - MIR SINE MIR -8 254 34 483 280 38 85 chr2 237837961 237838094 -12849760 + MIR SINE MIR 32 151 -111 1969 158 0 10 chr2 237838094 237838404 -12849450 + AluSx SINE Alu 1 307 -5 483 280 38 85 chr2 237838404 237838506 -12849348 + MIR SINE MIR 151 256 -6 234 91 0 0 chr2 237838716 237838749 -12849105 + (A)n Simple_repeat Simple_repeat 1 33 0 203 342 18 0 chr2 237838783 237838858 -12848996 + MIR SINE MIR 53 130 -78 2011 131 20 13 chr2 237838872 237839170 -12848684 + AluSx SINE Alu 1 300 -12 1953 150 13 29 chr2 237840465 237840779 -12847075 + AluSx SINE Alu 3 311 -1 1999 146 3 0 chr2 237841194 237841481 -12846373 + AluSx SINE Alu 1 288 -24 25 65 0 0 chr2 237843207 237843253 -12844601 + AT_rich Low_complexity Low_complexity 1 46 0 27 0 0 0 chr2 237843768 237843795 -12844059 + AT_rich Low_complexity Low_complexity 1 27 0 695 161 0 0 chr2 237845164 237845282 -12842572 - AluSg/x SINE Alu -10 302 185 21 36 0 0 chr2 237845629 237845657 -12842197 + AT_rich Low_complexity Low_complexity 1 28 0 2281 109 0 3 chr2 237846057 237846368 -12841486 + AluSg SINE Alu 1 310 0 33 0 0 0 chr2 237846433 237846466 -12841388 + AT_rich Low_complexity Low_complexity 1 33 0 441 246 8 34 chr2 237846574 237846692 -12841162 - MER58A DNA MER1_type 0 118 4 402 21 0 0 chr2 237847111 237847158 -12840696 + (GA)n Simple_repeat Simple_repeat 1 47 0 279 0 0 0 chr2 237847157 237847188 -12840666 + (TG)n Simple_repeat Simple_repeat 1 31 0 * 21 0 0 0 chr2 237847376 237847397 -12840457 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 237847495 237847518 -12840336 + AT_rich Low_complexity Low_complexity 1 23 0 1999 153 0 28 chr2 237848135 237848456 -12839398 + AluJb SINE Alu 1 312 0 740 221 193 33 chr2 237849303 237849728 -12838126 + MER20B DNA MER1_type 291 783 0 455 92 0 0 chr2 237850107 237850172 -12837682 + L1PB3 LINE L1 6085 6149 -5 2009 142 3 0 chr2 237850261 237850574 -12837280 - AluSx SINE Alu 0 314 1 1725 178 21 3 chr2 237851325 237851612 -12836242 - AluJb SINE Alu -20 292 1 461 284 47 18 chr2 237851965 237852134 -12835720 + MLT1I LTR MaLR 28 201 -208 21 0 0 0 chr2 237853861 237853882 -12833972 + AT_rich Low_complexity Low_complexity 1 21 0 1362 161 62 58 chr2 237854002 237854293 -12833561 + AluJb SINE Alu 1 292 -20 2065 144 66 18 chr2 237854432 237854836 -12833018 + MSTB LTR MaLR 1 364 0 364 244 98 81 chr2 237854971 237855205 -12832649 + L1ME4a LINE L1 5610 5847 -274 258 32 0 0 chr2 237855213 237855244 -12832610 + (A)n Simple_repeat Simple_repeat 1 31 0 779 128 0 45 chr2 237855255 237855388 -12832466 + FLAM_C SINE Alu 1 127 -6 2063 144 0 0 chr2 237855392 237855691 -12832163 + AluSx SINE Alu 3 301 -11 477 264 175 43 chr2 237856206 237856675 -12831179 + L1ME4a LINE L1 5387 5917 -204 225 178 22 0 chr2 237857088 237857133 -12830721 + L1ME4a LINE L1 4693 4738 -1408 427 304 149 7 chr2 237857223 237857532 -12830322 + L1ME4a LINE L1 5293 5645 -476 394 254 106 14 chr2 237857805 237857947 -12829907 + L1ME4a LINE L1 5960 6114 -7 199 385 52 0 chr2 237858631 237858727 -12829127 + MIR SINE MIR 1 101 -161 2137 125 0 7 chr2 237859100 237859403 -12828451 + AluSq SINE Alu 1 301 -12 186 321 19 0 chr2 237859414 237859467 -12828387 + MIR3 SINE MIR 145 198 -10 317 278 111 19 chr2 237859597 237859759 -12828095 - Tigger8 DNA MER2_type -219 447 271 1287 180 12 122 chr2 237859776 237860104 -12827750 - AluJb SINE Alu -20 292 1 503 152 0 0 chr2 237860132 237860211 -12827643 - MADE1 DNA Mariner -1 79 1 410 211 0 3 chr2 237860217 237860340 -12827514 + AluJ/FRAM SINE Alu 135 299 -13 2027 105 27 17 chr2 237860366 237860661 -12827193 + AluSg SINE Alu 1 298 -12 306 288 80 88 chr2 237861081 237861278 -12826576 - MIR SINE MIR -3 259 63 2053 125 30 0 chr2 237861278 237861581 -12826273 + AluSx SINE Alu 1 312 0 306 288 80 88 chr2 237861581 237861633 -12826221 - MIR SINE MIR -199 63 12 2110 77 3 20 chr2 237861691 237861989 -12825865 - AluY SINE Alu -18 293 1 1623 175 31 20 chr2 237862078 237862370 -12825484 + AluSx SINE Alu 1 295 -17 2134 138 0 0 chr2 237863769 237864074 -12823780 + AluSx SINE Alu 1 305 -7 582 259 70 81 chr2 237865079 237865338 -12822516 + MIR SINE MIR 7 262 0 246 279 47 35 chr2 237865475 237865561 -12822293 - MER5B DNA MER1_type -5 173 98 259 287 43 32 chr2 237866205 237866299 -12821555 - MIR3 SINE MIR -23 185 91 2143 105 7 7 chr2 237869165 237869460 -12818394 - AluSx SINE Alu -17 295 1 461 246 0 29 chr2 237869558 237869696 -12818158 + MIR SINE MIR 48 181 -81 213 278 0 19 chr2 237870532 237870586 -12817268 + L2 LINE L2 3137 3189 -83 869 211 49 20 chr2 237870653 237870857 -12816997 + AluJo SINE Alu 49 258 -54 2582 61 0 3 chr2 237871183 237871495 -12816359 - AluY SINE Alu 0 311 1 1063 123 7 7 chr2 237872031 237872185 -12815669 - AluSg/x SINE Alu -24 286 133 369 212 35 62 chr2 237872287 237872400 -12815454 + MIR SINE MIR 32 141 -121 1730 158 11 7 chr2 237872607 237872885 -12814969 + AluJb SINE Alu 10 288 -24 226 292 77 0 chr2 237873006 237873071 -12814783 + L2 LINE L2 3203 3272 0 2014 116 10 7 chr2 237873330 237873622 -12814232 - AluSq SINE Alu -20 293 1 947 135 0 39 chr2 237874364 237874520 -12813334 - AluSx SINE Alu -6 303 154 667 105 0 0 chr2 237874520 237874606 -12813248 - AluSx SINE Alu -226 87 2 236 313 94 0 chr2 237875109 237875205 -12812649 - L2 LINE L2 0 3313 3209 1601 169 72 0 chr2 237875443 237875721 -12812133 + AluJo SINE Alu 1 298 -14 22 103 0 0 chr2 237876740 237876818 -12811036 + AT_rich Low_complexity Low_complexity 1 78 0 1513 129 67 0 chr2 237876869 237877124 -12810730 - L1MA5A LINE L1 -3 6294 6023 1357 216 14 17 chr2 237878725 237879021 -12808833 - AluJo SINE Alu -17 295 1 1632 178 0 42 chr2 237879021 237879329 -12808525 - AluJb SINE Alu -16 296 1 215 364 91 9 chr2 237879342 237879452 -12808402 - L2 LINE L2 -12 3260 3142 1977 144 10 3 chr2 237879485 237879783 -12808071 - AluSx SINE Alu -12 300 1 307 125 0 42 chr2 237879788 237879836 -12808018 - Alu SINE Alu -255 47 2 2328 50 42 3 chr2 237879847 237880130 -12807724 - AluY SINE Alu -17 294 1 657 243 113 25 chr2 237880534 237880773 -12807081 + MIR SINE MIR 3 262 0 1324 213 16 0 chr2 237880775 237881029 -12806825 - AluJo SINE Alu -13 299 42 186 229 0 21 chr2 237881338 237881386 -12806468 + L2 LINE L2 3255 3301 -12 340 224 0 24 chr2 237881723 237881808 -12806046 - L1MC4 LINE L1 0 8042 7960 2312 107 0 3 chr2 237881845 237882153 -12805701 - AluSc SINE Alu -2 307 1 21 0 0 0 chr2 237882183 237882204 -12805650 + AT_rich Low_complexity Low_complexity 1 21 0 2322 107 7 3 chr2 237882260 237882570 -12805284 - AluSx SINE Alu -1 311 1 2344 84 3 0 chr2 237883301 237883600 -12804254 - AluSp SINE Alu -13 300 1 1203 174 78 4 chr2 237883601 237883843 -12804011 - L1MC3 LINE L1 -7 7778 7519 309 198 10 62 chr2 237883919 237884015 -12803839 - L1ME4a LINE L1 -68 6053 5963 1938 153 17 0 chr2 237884154 237884454 -12803400 - AluSx SINE Alu -7 305 1 1773 138 0 65 chr2 237884535 237884860 -12802994 - AluJb SINE Alu -8 304 1 248 281 170 12 chr2 237885003 237885194 -12802660 + L2 LINE L2 2766 3070 -243 287 283 157 35 chr2 237885209 237885548 -12802306 - MLT1J LTR MaLR -9 502 207 315 71 0 0 chr2 237885556 237885598 -12802256 + (A)n Simple_repeat Simple_repeat 1 42 0 1166 198 128 41 chr2 237885832 237886191 -12801663 - Charlie4a DNA MER1_type -1461 500 103 1866 136 13 33 chr2 237886191 237886492 -12801362 - AluSx SINE Alu -17 295 1 1166 198 128 41 chr2 237886492 237886521 -12801333 - Charlie4a DNA MER1_type -1858 103 78 249 228 161 81 chr2 237886602 237886751 -12801103 - MLT1L LTR MaLR -453 162 2 1795 148 7 7 chr2 237886958 237887236 -12800618 - AluSx SINE Alu -16 296 19 846 253 70 9 chr2 237887532 237887761 -12800093 - MIR SINE MIR -13 249 7 1913 128 0 59 chr2 237887844 237888050 -12799804 + AluJo SINE Alu 1 183 -129 2372 95 3 0 chr2 237888050 237888356 -12799498 - AluSp SINE Alu -5 308 2 1913 128 0 59 chr2 237888356 237888470 -12799384 + AluJo SINE Alu 183 302 -10 1290 134 9 141 chr2 237888532 237888651 -12799203 + MLT1D LTR MaLR 1 134 -371 1860 109 106 0 chr2 237888651 237888926 -12798928 - AluSq SINE Alu -9 304 1 1290 134 9 141 chr2 237888926 237889126 -12798728 + MLT1D LTR MaLR 134 278 -227 1648 187 0 13 chr2 237889129 237889439 -12798415 + AluSx SINE Alu 6 311 -1 1456 142 43 0 chr2 237889442 237889674 -12798180 + MSTA LTR MaLR 187 428 0 1678 147 16 0 chr2 237889719 237889970 -12797884 - AluJb SINE Alu 0 312 58 679 146 10 0 chr2 237889970 237890066 -12797788 + AluJb SINE Alu 198 294 -18 820 154 0 46 chr2 237890113 237890243 -12797611 - FLAM_A SINE Alu -9 124 1 381 331 53 0 chr2 237890245 237890414 -12797440 - MIR SINE MIR -62 200 23 2020 125 0 44 chr2 237891089 237891408 -12796446 + AluSx SINE Alu 1 305 -7 1691 106 0 0 chr2 237891735 237891953 -12795901 - AluSx SINE Alu -94 218 1 201 202 12 24 chr2 237892038 237892122 -12795732 + (TA)n Simple_repeat Simple_repeat 1 83 0 768 188 0 0 chr2 237892122 237892234 -12795620 - FLAM_C SINE Alu -30 113 2 2252 82 28 0 chr2 237892265 237892556 -12795298 - AluSq SINE Alu -14 299 1 2131 110 0 14 chr2 237892834 237893150 -12794704 - AluSq SINE Alu 0 312 1 1667 158 7 44 chr2 237893160 237893337 -12794517 - AluJb SINE Alu -25 287 124 216 0 0 0 chr2 237893337 237893361 -12794493 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1667 158 7 44 chr2 237893361 237893480 -12794374 - AluJb SINE Alu -188 124 2 430 221 103 65 chr2 237893482 237893701 -12794153 + L1MC5 LINE L1 7653 7885 -76 2350 107 3 0 chr2 237893701 237894011 -12793843 + AluSq SINE Alu 1 311 -2 430 221 103 65 chr2 237894011 237894054 -12793800 + L1MC5 LINE L1 7885 7925 -36 586 196 0 0 chr2 237894055 237894152 -12793702 + MER93b LTR ERV1 1 97 -276 871 123 8 0 chr2 237894154 237894276 -12793578 + FLAM_C SINE Alu 1 123 -20 28 29 0 0 chr2 237894276 237894311 -12793543 + AT_rich Low_complexity Low_complexity 1 35 0 669 206 35 61 chr2 237894323 237894551 -12793303 + MER93b LTR ERV1 93 314 -59 2273 99 7 0 chr2 237894620 237894913 -12792941 - AluSq SINE Alu -18 295 1 525 91 0 0 chr2 237895445 237895511 -12792343 + AluJ/FLAM SINE Alu 2 67 -245 908 88 0 0 chr2 237895511 237895625 -12792229 + AluSp/q SINE Alu 168 281 -32 1858 154 3 26 chr2 237895676 237895982 -12791872 + AluJb SINE Alu 1 299 -13 289 214 143 0 chr2 237896533 237896603 -12791251 - MLT1B LTR MaLR -310 80 1 233 258 194 0 chr2 237897140 237897202 -12790652 - MIR SINE MIR -107 101 28 2002 146 0 10 chr2 237897379 237897687 -12790167 - AluJb SINE Alu -7 305 1 2184 102 7 0 chr2 237897716 237898010 -12789844 - AluSg SINE Alu -14 296 1 812 122 0 0 chr2 237898030 237898137 -12789717 - U6 snRNA snRNA 0 107 1 370 290 136 17 chr2 237898193 237898369 -12789485 + L1ME1 LINE L1 5482 5678 -443 2365 81 7 0 chr2 237898373 237898670 -12789184 - AluSg SINE Alu -11 299 1 301 150 76 14 chr2 237898716 237898789 -12789065 + AluSg/x SINE Alu 118 188 -112 2372 81 7 13 chr2 237899154 237899463 -12788391 + AluSq SINE Alu 1 307 -6 1582 168 67 28 chr2 237899474 237899759 -12788095 + AluJb SINE Alu 1 296 -16 540 223 81 120 chr2 237899908 237900070 -12787784 + MLT1L LTR MaLR 123 271 -344 2275 113 0 3 chr2 237900070 237900380 -12787474 - AluSx SINE Alu -3 309 1 540 223 81 120 chr2 237900380 237900500 -12787354 + MLT1L LTR MaLR 271 394 -221 1009 260 154 14 chr2 237900666 237901024 -12786830 - HsTC2 DNA Tc2 -182 1716 1309 2238 177 82 36 chr2 237901041 237901082 -12786772 - L1MC/D LINE L1 -497 5745 5707 902 144 0 23 chr2 237901082 237901214 -12786640 - FLAM_C SINE Alu -4 129 1 2238 177 82 36 chr2 237901214 237901738 -12786116 - L1MC/D LINE L1 -535 5707 5134 2251 108 13 0 chr2 237901738 237902045 -12785809 - AluY SINE Alu 0 311 1 2238 177 82 36 chr2 237902045 237902063 -12785791 - L1MC/D LINE L1 -1108 5134 5118 1033 149 0 6 chr2 237902074 237902235 -12785619 + AluJb SINE Alu 140 299 -13 1827 134 51 7 chr2 237902390 237902666 -12785188 + AluSx SINE Alu 1 288 -24 1707 193 0 0 chr2 237902684 237902984 -12784870 + AluJb SINE Alu 1 300 -12 43 56 0 0 chr2 237903216 237903287 -12784567 + AT_rich Low_complexity Low_complexity 1 71 0 17034 38 1 6 chr2 237903362 237906071 -12781783 + L1PA5 LINE L1 3440 6148 -6 183 139 0 0 chr2 237906082 237906118 -12781736 + (A)n Simple_repeat Simple_repeat 1 36 0 802 141 47 8 chr2 237906173 237906301 -12781553 + FLAM_C SINE Alu 1 133 0 1397 217 98 42 chr2 237906483 237906635 -12781219 + L1ME1 LINE L1 5675 5817 -349 2332 93 0 3 chr2 237906635 237906937 -12780917 + AluSg SINE Alu 3 303 -7 1397 217 98 42 chr2 237906937 237907241 -12780613 + L1ME1 LINE L1 5817 6157 -9 1184 237 57 83 chr2 237907298 237907708 -12780146 + L1MC4a LINE L1 5271 5690 -472 2613 65 0 0 chr2 237907708 237908018 -12779836 + AluY SINE Alu 1 310 -1 1184 237 57 83 chr2 237908018 237908088 -12779766 + L1MC4a LINE L1 5690 5704 -458 2212 111 0 0 chr2 237908088 237908377 -12779477 + AluSg SINE Alu 1 289 -21 1184 237 57 83 chr2 237908377 237908475 -12779379 + L1MC4a LINE L1 5704 5803 -359 2287 104 3 0 chr2 237908475 237908773 -12779081 + AluSx SINE Alu 1 299 -13 1503 217 42 3 chr2 237908783 237908901 -12778953 + AluJo SINE Alu 2 114 -198 468 0 0 0 chr2 237908901 237908953 -12778901 + (TAAAA)n Simple_repeat Simple_repeat 4 55 0 1503 217 42 3 chr2 237908953 237909120 -12778734 + AluJo SINE Alu 114 298 -14 443 313 66 64 chr2 237909121 237909262 -12778592 + L1MC4a LINE L1 4312 4451 -1695 1932 134 28 7 chr2 237909262 237909553 -12778301 - AluSx SINE Alu -15 297 1 443 313 66 64 chr2 237909553 237909778 -12778076 + L1MC4a LINE L1 4451 4682 -1464 2396 92 0 0 chr2 237909778 237910081 -12777773 + AluSc SINE Alu 1 303 -6 443 313 66 64 chr2 237910081 237910212 -12777642 + L1MC4a LINE L1 4682 4811 -1335 2161 90 3 7 chr2 237910327 237910617 -12777237 - AluSx SINE Alu -13 299 11 599 256 135 26 chr2 237911480 237911792 -12776062 + L1MC4a LINE L1 5586 5931 -1877 249 215 89 0 chr2 237911870 237911949 -12775905 + L1ME4a LINE L1 6034 6119 -2 746 208 13 0 chr2 237912227 237912376 -12775478 - FRAM SINE Alu -6 170 20 1764 103 157 0 chr2 237912444 237912705 -12775149 - AluSx SINE Alu 0 302 1 2108 116 0 10 chr2 237912753 237913047 -12774807 + AluY SINE Alu 1 291 -20 1205 215 12 4 chr2 237913267 237913513 -12774341 - AluJo SINE Alu -64 248 1 2333 114 0 0 chr2 237913584 237913892 -12773962 - AluSx SINE Alu -4 308 1 2606 53 0 3 chr2 237913892 237914195 -12773659 - AluY SINE Alu -8 303 2 2361 98 0 7 chr2 237914196 237914501 -12773353 - AluSx SINE Alu -9 303 1 369 197 30 138 chr2 237914502 237914610 -12773244 + L2 LINE L2 3053 3130 -183 1530 186 97 0 chr2 237914610 237914889 -12772965 + AluJo SINE Alu 1 306 -6 369 197 30 138 chr2 237914889 237914983 -12772871 + L2 LINE L2 3130 3233 -80 295 296 99 52 chr2 237915224 237915437 -12772417 + MIR SINE MIR 26 248 -14 1226 168 0 0 chr2 237915467 237915664 -12772190 - MLT1B LTR MaLR 0 390 194 926 191 187 54 chr2 237915675 237916224 -12771630 - LTR48 LTR ERV1 0 787 1 684 232 61 6 chr2 237916241 237916405 -12771449 - MLT1B LTR MaLR -217 173 1 2231 95 7 0 chr2 237916644 237916929 -12770925 + AluSx SINE Alu 1 287 -25 24 0 0 0 chr2 237917222 237917246 -12770608 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr2 237917509 237917537 -12770317 + AT_rich Low_complexity Low_complexity 1 28 0 2356 96 0 13 chr2 237917604 237917918 -12769936 - AluSg SINE Alu 0 310 1 409 236 121 13 chr2 237918188 237918345 -12769509 - MIR SINE MIR -31 231 58 751 174 7 29 chr2 237918529 237918667 -12769187 - AluJo SINE Alu -176 136 2 2415 78 0 3 chr2 237918913 237919209 -12768645 + AluY SINE Alu 1 295 -16 35 0 0 0 chr2 237919441 237919476 -12768378 + AT_rich Low_complexity Low_complexity 1 35 0 1605 164 11 14 chr2 237919509 237919823 -12768031 - AluJo SINE Alu 0 318 6 1276 171 0 50 chr2 237919856 237920095 -12767759 - AluJo SINE Alu -28 284 58 2296 91 3 3 chr2 237920176 237920474 -12767380 + AluSx SINE Alu 1 298 -14 1861 104 35 8 chr2 237920822 237921127 -12766727 - AluSp SINE Alu 0 329 18 228 35 0 0 chr2 237921143 237921172 -12766682 + (T)n Simple_repeat Simple_repeat 1 29 0 343 250 133 17 chr2 237921255 237921375 -12766479 - L1MC/D LINE L1 -2001 5807 5674 2353 104 3 0 chr2 237921562 237921871 -12765983 - AluSp SINE Alu -3 310 1 2122 91 13 45 chr2 237921879 237922187 -12765667 - AluSg1 SINE Alu -11 298 1 325 248 76 0 chr2 237922192 237922297 -12765557 - L1MC/D LINE L1 -1971 4175 4063 442 198 16 202 chr2 237922300 237922547 -12765307 + MIR SINE MIR 5 205 -57 334 272 80 59 chr2 237922708 237923128 -12764726 - L1MC/D LINE L1 -2146 4000 3566 1915 133 26 0 chr2 237923280 237923550 -12764304 - AluSx SINE Alu -35 277 1 810 223 53 71 chr2 237923615 237923897 -12763957 + MLT1B LTR MaLR 3 279 -111 345 311 31 50 chr2 237923934 237924095 -12763759 - MLT1-int LTR MaLR -511 860 703 599 274 30 0 chr2 237924279 237924443 -12763411 - MLT1-int LTR MaLR -770 601 433 1990 154 3 6 chr2 237924463 237924774 -12763080 - AluSx SINE Alu -2 310 1 1419 207 49 26 chr2 237924968 237925271 -12762583 - MLT1F LTR MaLR -1 541 232 2621 119 64 0 chr2 237925271 237925659 -12762195 + MER4E LTR ERV1 1 413 -366 732 244 107 5 chr2 237925669 237925874 -12761980 - MLT1F LTR MaLR -316 226 1 207 0 0 0 chr2 237926076 237926099 -12761755 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1909 78 53 60 chr2 237926105 237926388 -12761466 - AluY SINE Alu -30 281 1 2441 76 0 0 chr2 237927150 237927440 -12760414 + AluSg SINE Alu 1 290 -20 271 241 176 0 chr2 237927480 237927588 -12760266 - L1ME4a LINE L1 -20 6101 5975 331 73 0 0 chr2 237927763 237927804 -12760050 + FLAM SINE Alu 85 125 -8 2349 94 7 0 chr2 237927858 237928208 -12759646 - AluSp SINE Alu 0 352 1 1903 132 38 11 chr2 237928310 237928597 -12759257 + AluJb SINE Alu 1 295 -17 269 279 72 27 chr2 237929307 237929418 -12758436 - L2 LINE L2 -12 3301 3186 2184 79 0 0 chr2 237929645 237929910 -12757944 + AluSx SINE Alu 34 298 -14 341 194 0 15 chr2 237930281 237930348 -12757506 + LTR67 LTR ERVL 486 551 -6 25 0 0 0 chr2 237930484 237930509 -12757345 + AT_rich Low_complexity Low_complexity 1 25 0 1480 192 3 58 chr2 237930509 237930657 -12757197 + AluJo SINE Alu 4 158 -154 2459 76 3 0 chr2 237930657 237930959 -12756895 + AluSp SINE Alu 1 303 -10 1480 192 3 58 chr2 237930959 237931117 -12756737 + AluJo SINE Alu 153 294 -13 2603 53 0 0 chr2 237931117 237931417 -12756437 - AluY SINE Alu -11 300 1 2258 120 0 0 chr2 237931440 237931741 -12756113 - AluSx SINE Alu -10 302 2 243 0 0 0 chr2 237931820 237931847 -12756007 + (TG)n Simple_repeat Simple_repeat 2 28 0 371 247 73 90 chr2 237932058 237932161 -12755693 - L1ME LINE L1 -456 5665 5562 1075 257 88 53 chr2 237932161 237932253 -12755601 - MLT1J LTR MaLR -3 508 421 2238 97 0 3 chr2 237932253 237932541 -12755313 + AluSg SINE Alu 1 287 -23 207 0 0 0 chr2 237932544 237932567 -12755287 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1075 257 88 53 chr2 237932567 237932961 -12754893 - MLT1J LTR MaLR -91 420 1 371 247 73 90 chr2 237932961 237933035 -12754819 - L1ME LINE L1 -559 5562 5491 777 174 8 0 chr2 237933237 237933369 -12754485 - FLAM_C SINE Alu 0 133 1 240 310 231 25 chr2 237933370 237933738 -12754116 + L2 LINE L2 2107 2550 -764 2360 104 0 3 chr2 237934191 237934500 -12753354 - AluSq SINE Alu -5 308 1 231 270 32 0 chr2 237934539 237934602 -12753252 - L2 LINE L2 0 3272 3208 2290 106 3 0 chr2 237935341 237935644 -12752210 - AluSq SINE Alu -9 304 1 2007 116 4 0 chr2 237935779 237936055 -12751799 + AluSx SINE Alu 1 277 -35 2607 64 0 3 chr2 237936492 237936804 -12751050 + AluY SINE Alu 1 311 0 2193 120 125 13 chr2 237937182 237937565 -12750289 - MSTA LTR MaLR 0 428 3 418 306 119 18 chr2 237938043 237938262 -12749592 - MLT1K LTR MaLR -6 582 342 218 206 0 48 chr2 237938996 237939059 -12748795 + A-rich Low_complexity Low_complexity 3 62 0 384 267 67 33 chr2 237939264 237939352 -12748502 - MLT1J LTR MaLR -349 162 65 2241 114 3 0 chr2 237939352 237939650 -12748204 - AluSx SINE Alu -13 299 1 384 267 67 33 chr2 237939650 237939711 -12748143 - MLT1J LTR MaLR -446 65 8 2411 85 0 0 chr2 237939904 237940211 -12747643 - AluY SINE Alu -4 307 1 1825 168 124 24 chr2 237940490 237940902 -12746952 - MLT1C LTR MaLR -14 453 1 1800 149 10 7 chr2 237941283 237941584 -12746270 - AluJb SINE Alu -9 303 2 1508 124 0 31 chr2 237941757 237941982 -12745872 - AluSg/x SINE Alu -13 299 82 1290 77 18 0 chr2 237942167 237942337 -12745517 + AluSp SINE Alu 137 309 -4 1442 80 0 61 chr2 237942417 237942629 -12745225 + AluSq SINE Alu 106 304 -9 1423 75 0 61 chr2 237942692 237942905 -12744949 + AluSp SINE Alu 106 305 -8 1551 83 0 0 chr2 237942968 237943172 -12744682 + AluSp SINE Alu 106 309 -4 1144 139 0 6 chr2 237943221 237943393 -12744461 + AluY SINE Alu 104 274 -37 216 0 0 0 chr2 237943400 237943424 -12744430 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 487 77 39 26 chr2 237943502 237943580 -12744274 + U6 snRNA snRNA 1 79 -28 2389 104 0 9 chr2 237943856 237944172 -12743682 - AluSq SINE Alu 0 313 1 274 274 44 26 chr2 237944241 237944354 -12743500 + MER104 DNA Tc2 66 180 0 1791 179 0 7 chr2 237944502 237944798 -12743056 - AluJb SINE Alu -18 294 1 2189 105 16 7 chr2 237945174 237945479 -12742375 - AluSq SINE Alu -5 308 1 276 333 72 14 chr2 237945480 237945618 -12742236 + L2 LINE L2 3125 3270 -2 1262 134 0 5 chr2 237945850 237946036 -12741818 - AluSp SINE Alu -9 304 120 1759 156 83 0 chr2 237946448 237946737 -12741117 + AluSq SINE Alu 1 313 0 2621 51 0 6 chr2 237946956 237947267 -12740587 - AluY SINE Alu -2 309 1 1638 175 31 20 chr2 237947356 237947648 -12740206 + AluSx SINE Alu 1 295 -17 2153 138 0 0 chr2 237949047 237949352 -12738502 + AluSx SINE Alu 1 305 -7 509 259 70 81 chr2 237950357 237950616 -12737238 + MIR SINE MIR 7 262 0 223 279 47 35 chr2 237950753 237950839 -12737015 - MER5B DNA MER1_type -5 173 98 241 182 0 36 chr2 237951483 237951538 -12736316 - MIR3 SINE MIR -23 185 133 1542 122 29 20 chr2 237952256 237952502 -12735352 + AluSx SINE Alu 45 292 -20 2267 118 0 13 chr2 237952611 237952926 -12734928 - AluSx SINE Alu -1 311 1 1326 234 13 13 chr2 237953071 237953375 -12734479 + AluJb SINE Alu 1 304 -8 822 208 0 12 chr2 237953377 237953554 -12734300 + MER7A DNA MER2_type 1 172 -174 243 299 166 21 chr2 237954200 237954387 -12733467 + MIR SINE MIR 44 257 -5 2113 117 3 17 chr2 237954852 237955152 -12732702 - AluSx SINE Alu -16 296 1 320 312 148 11 chr2 237955246 237955435 -12732419 - MIR SINE MIR -11 251 37 1229 179 111 79 chr2 237956087 237956529 -12731325 + LTR37B LTR ERV1 6 461 -7 1400 139 9 5 chr2 237956986 237957209 -12730645 + AluJb SINE Alu 80 303 -9 2267 82 0 63 chr2 237958466 237958785 -12729069 - AluSx SINE Alu -13 299 1 1533 164 0 91 chr2 237959381 237959524 -12728330 + AluJo SINE Alu 1 155 -157 1812 156 7 13 chr2 237959524 237959825 -12728029 + AluJb SINE Alu 1 299 -13 1533 164 0 91 chr2 237959825 237959986 -12727868 + AluJo SINE Alu 155 273 -39 180 0 0 0 chr2 237959986 237960006 -12727848 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1533 164 0 91 chr2 237960006 237960041 -12727813 + AluJo SINE Alu 273 310 -2 355 335 60 0 chr2 237960195 237960395 -12727459 + L1MC1 LINE L1 5631 5842 -1966 310 317 67 19 chr2 237960485 237960693 -12727161 - L2 LINE L2 -105 3208 2991 241 215 46 0 chr2 237960706 237960771 -12727083 + L1ME4a LINE L1 5939 6006 -115 302 265 72 0 chr2 237960813 237960896 -12726958 + MIR SINE MIR 52 140 -122 1941 157 10 0 chr2 237960972 237961277 -12726577 + AluJo SINE Alu 1 308 -4 1744 221 63 34 chr2 237961696 237962204 -12725650 - L1ME2 LINE L1 -19 6145 5623 743 196 12 61 chr2 237962205 237962368 -12725486 - AluJo SINE Alu -127 185 31 1102 176 6 0 chr2 237962368 237962550 -12725304 + AluSg/x SINE Alu 110 292 -20 389 235 0 0 chr2 237962551 237962636 -12725218 - L1ME2 LINE L1 -769 5473 5389 524 139 0 0 chr2 237962731 237962810 -12725044 + U6 snRNA snRNA 1 79 -28 223 318 0 0 chr2 237963137 237963203 -12724651 - MER5A DNA MER1_type 0 189 124 410 264 183 55 chr2 237963306 237963929 -12723925 + L1MEd LINE L1 595 1287 -4842 397 288 76 38 chr2 237963980 237964245 -12723609 + L1MEd LINE L1 1022 1287 -4842 684 180 8 0 chr2 237964276 237964398 -12723456 + FRAM SINE Alu 51 173 -3 2011 86 97 0 chr2 237964741 237965010 -12722844 + AluSx SINE Alu 1 295 -17 1322 193 68 17 chr2 237965241 237965536 -12722318 + L1MC1 LINE L1 6021 6330 -3 316 267 166 32 chr2 237965542 237965729 -12722125 + L1MEd LINE L1 2350 2561 -3568 2262 96 3 0 chr2 237965751 237966044 -12721810 + AluSx SINE Alu 1 294 -18 189 300 0 0 chr2 237966882 237966922 -12720932 - MIR SINE MIR -139 69 30 1240 189 63 46 chr2 237967086 237967371 -12720483 - AluJo SINE Alu -20 292 3 378 213 117 11 chr2 237967502 237967596 -12720258 - AluSq/x SINE Alu -155 148 45 408 86 0 99 chr2 237968947 237968966 -12718888 + L1MB8 LINE L1 6099 6118 -60 2119 118 3 0 chr2 237968966 237969262 -12718592 + AluSx SINE Alu 1 297 -15 408 86 0 99 chr2 237969262 237969323 -12718531 + L1MB8 LINE L1 6118 6171 -7 1689 171 3 0 chr2 237969331 237969618 -12718236 - AluSx SINE Alu -24 288 1 1549 204 65 52 chr2 237970058 237970323 -12717531 + L1MEd LINE L1 2765 3025 -3104 1838 140 33 42 chr2 237970323 237970630 -12717224 + AluJo SINE Alu 1 304 -8 1549 204 65 52 chr2 237970630 237970978 -12716876 + L1MEd LINE L1 3025 3386 -2743 2098 109 34 10 chr2 237971026 237971320 -12716534 - AluSx SINE Alu -11 301 1 2335 100 0 0 chr2 237971422 237971723 -12716131 + AluSx SINE Alu 1 301 -11 1527 208 23 10 chr2 237971731 237972039 -12715815 - AluJb SINE Alu 0 312 1 1768 173 7 0 chr2 237972183 237972484 -12715370 - AluJo SINE Alu -3 309 7 259 266 139 66 chr2 237973265 237973509 -12714345 + L1MC/D LINE L1 5579 5840 -1968 822 69 0 0 chr2 237973569 237973670 -12714184 + AluY SINE Alu 1 101 -210 800 131 0 0 chr2 237973792 237973899 -12713955 - AluJb SINE Alu -195 117 11 1631 106 0 21 chr2 237973933 237974168 -12713686 - L1PA14 LINE L1 -3 6158 5929 2180 118 7 0 chr2 237974307 237974613 -12713241 + AluSx SINE Alu 1 308 -4 2220 112 3 13 chr2 237975078 237975390 -12712464 - AluSx SINE Alu -3 309 1 2350 109 0 0 chr2 237975507 237975819 -12712035 - AluSx SINE Alu 0 312 1 1906 127 25 7 chr2 237976060 237976215 -12711639 - AluSx SINE Alu -23 289 125 216 0 0 0 chr2 237976215 237976239 -12711615 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 1906 127 25 7 chr2 237976239 237976367 -12711487 - AluSx SINE Alu -187 125 1 1057 184 10 5 chr2 237976394 237976600 -12711254 - L1MD3 LINE L1 -84 7911 7705 1918 173 0 0 chr2 237976614 237976914 -12710940 - AluJb SINE Alu -11 301 2 1812 118 63 11 chr2 237977176 237977463 -12710391 + AluSc SINE Alu 1 302 -7 2150 128 3 7 chr2 237977759 237978064 -12709790 - AluSx SINE Alu -8 304 1 229 275 99 11 chr2 237978502 237978593 -12709261 + L2 LINE L2 3167 3265 -7 2155 125 3 0 chr2 237978955 237979252 -12708602 + AluSq SINE Alu 1 298 -15 234 0 0 0 chr2 237979317 237979343 -12708511 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1763 154 4 11 chr2 237979346 237979625 -12708229 - AluJo SINE Alu -29 283 7 318 50 0 0 chr2 237979875 237979915 -12707939 + (TTCA)n Simple_repeat Simple_repeat 3 42 0 2006 148 0 0 chr2 237979915 237980198 -12707656 - AluSx SINE Alu -29 283 1 507 302 5 62 chr2 237980204 237980325 -12707529 - MIR SINE MIR -10 252 144 2098 123 33 0 chr2 237980325 237980626 -12707228 - AluSx SINE Alu -1 311 1 507 302 5 62 chr2 237980626 237980696 -12707158 - MIR SINE MIR -118 144 72 381 297 18 0 chr2 237980756 237980867 -12706987 - L2 LINE L2 -7 3265 3153 290 336 37 0 chr2 237981685 237981792 -12706062 - MER5A DNA MER1_type -29 160 50 1902 134 28 0 chr2 237981834 237982124 -12705730 - AluSx SINE Alu -14 298 1 1007 114 0 0 chr2 237982124 237982255 -12705599 - AluSq/x SINE Alu -177 135 5 397 282 29 82 chr2 237982394 237982564 -12705290 + MIR3 SINE MIR 36 196 -12 892 177 13 6 chr2 237983548 237983706 -12704148 - L1PA16 LINE L1 -207 5959 5801 447 290 23 34 chr2 237983710 237983886 -12703968 + ERVL LTR ERVL 5166 5339 -425 2061 139 0 10 chr2 237983893 237984203 -12703651 + AluSg SINE Alu 1 307 -3 2407 94 3 0 chr2 237984210 237984517 -12703337 + AluSp SINE Alu 1 308 -5 192 77 0 0 chr2 237985815 237985841 -12702013 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 831 146 7 36 chr2 237985841 237985978 -12701876 - AluSq/x SINE Alu -180 133 1 200 208 52 21 chr2 237987152 237987248 -12700606 + (TA)n Simple_repeat Simple_repeat 2 100 0 2179 132 0 0 chr2 237987643 237987947 -12699907 - AluSq SINE Alu -9 304 1 24 53 0 0 chr2 237988101 237988139 -12699715 + AT_rich Low_complexity Low_complexity 1 38 0 2327 109 0 3 chr2 237988223 237988527 -12699327 - AluSg SINE Alu -7 303 1 6170 185 50 15 chr2 237988904 237989011 -12698843 + L1 LINE L1 2919 3021 -3125 1890 164 10 0 chr2 237989011 237989316 -12698538 + AluJo SINE Alu 1 308 -4 6170 185 50 15 chr2 237989316 237990581 -12697273 + L1 LINE L1 3021 4340 -1806 5208 116 21 19 chr2 238040604 238041443 -12646411 + L1PA10 LINE L1 5326 6166 -2 385 256 128 17 chr2 238041576 238041748 -12646106 + L1ME3A LINE L1 5949 6139 -31 525 212 0 0 chr2 238042882 238042981 -12644873 - Tigger7 DNA MER2_type 0 2491 2393 * 840 200 18 12 chr2 238042979 238043144 -12644710 - Tigger7 DNA MER2_type -284 266 101 246 62 0 0 chr2 238043543 238043569 -12644285 + (TA)n Simple_repeat Simple_repeat 1 58 0 246 62 0 0 chr2 238043569 238043601 -12644253 + (TA)n Simple_repeat Simple_repeat 1 32 0 182 137 32 42 chr2 238043634 238043729 -12644125 + (TA)n Simple_repeat Simple_repeat 1 94 0 1744 172 37 76 chr2 238044904 238045310 -12642544 - MLT1B LTR MaLR 0 390 1 186 308 0 31 chr2 238045390 238045455 -12642399 + MIR SINE MIR 16 78 -130 530 272 26 47 chr2 238045631 238045773 -12642081 + MIR SINE MIR 13 152 -110 2166 142 34 3 chr2 238045773 238046126 -12641728 + THE1B LTR MaLR 1 364 0 530 272 26 47 chr2 238046126 238046174 -12641680 + MIR SINE MIR 152 199 -63 2216 125 30 38 chr2 238046426 238046793 -12641061 - THE1B LTR MaLR 0 364 1 4597 81 44 0 chr2 238046793 238047407 -12640447 - THE1B-int LTR MaLR 0 1580 940 2775 147 98 2 chr2 238047733 238048242 -12639612 - MER89 LTR ERV1 0 559 2 248 314 22 44 chr2 238049397 238049440 -12638414 + L2 LINE L2 3137 3179 -93 1945 156 0 3 chr2 238049440 238049735 -12638119 - AluJb SINE Alu -16 296 3 248 314 22 44 chr2 238049735 238049828 -12638026 + L2 LINE L2 3179 3270 -2 1266 249 71 65 chr2 238052711 238052794 -12635060 - MLT1J LTR MaLR 0 511 430 1863 163 10 29 chr2 238052794 238053101 -12634753 - AluJb SINE Alu -11 301 1 1266 249 71 65 chr2 238053101 238053392 -12634462 - MLT1J LTR MaLR -81 430 142 1826 145 186 14 chr2 238053392 238053757 -12634097 + MSTA LTR MaLR 1 428 0 9858 125 19 40 chr2 238053759 238055372 -12632482 + MSTA-int LTR MaLR 3 1580 0 2151 119 127 21 chr2 238055374 238055759 -12632095 + MSTA LTR MaLR 3 428 0 1266 249 71 65 chr2 238055759 238055867 -12631987 - MLT1J LTR MaLR -369 142 19 281 230 31 41 chr2 238056182 238056295 -12631559 - LTR33A LTR ERVL 0 523 439 258 331 14 58 chr2 238056450 238056589 -12631265 - MLT2E LTR ERVL -478 150 18 227 182 61 30 chr2 238056772 238056838 -12631016 - MIR SINE MIR -78 184 117 24 32 0 0 chr2 238057647 238057678 -12630176 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr2 238057731 238057752 -12630102 + (A)n Simple_repeat Simple_repeat 1 21 0 1943 161 3 39 chr2 238059213 238059593 -12628261 + L1MB2 LINE L1 5406 5771 -400 203 0 37 0 chr2 238059603 238059630 -12628224 + (TA)n Simple_repeat Simple_repeat 2 29 0 339 25 0 0 chr2 238060380 238060420 -12627434 + (TA)n Simple_repeat Simple_repeat 1 40 0 186 139 85 8 chr2 238060596 238060725 -12627129 + (TA)n Simple_repeat Simple_repeat 1 139 0 248 105 0 0 chr2 238060769 238060807 -12627047 + L1MB2 LINE L1 5782 5819 -515 1910 183 16 8 chr2 238060809 238061175 -12626679 + L1MB2 LINE L1 5795 6163 -8 189 107 0 0 chr2 238061471 238061499 -12626355 + (TATATG)n Simple_repeat Simple_repeat 3 30 0 626 254 86 47 chr2 238061813 238062092 -12625762 + HsTC2a DNA Tc2 4 293 -451 770 231 156 73 chr2 238062187 238062651 -12625203 - MLT1F1 LTR MaLR -8 534 46 664 228 139 46 chr2 238062680 238062961 -12624893 + MLT1I LTR MaLR 101 407 -2 2343 81 0 0 chr2 238063049 238063367 -12624487 + AluSq SINE Alu 1 318 0 727 253 87 47 chr2 238063367 238063407 -12624447 + HsTC2a DNA Tc2 369 406 -1492 1488 188 74 31 chr2 238063407 238063480 -12624374 + MER58B DNA MER1_type 3 71 -2349 2546 52 7 0 chr2 238063480 238063787 -12624067 - AluY SINE Alu -2 309 1 1488 188 74 31 chr2 238063787 238064038 -12623816 + MER58B DNA MER1_type 71 341 0 727 253 87 47 chr2 238064038 238064297 -12623557 + HsTC2a DNA Tc2 406 680 -62 1461 169 30 63 chr2 238064423 238064725 -12623129 - AluJo SINE Alu -20 292 1 1838 112 58 7 chr2 238064903 238065179 -12622675 + AluSx SINE Alu 20 309 -3 3508 208 38 60 chr2 238065782 238065818 -12622036 - L1ME1 LINE L1 -7 6159 6124 2322 98 7 0 chr2 238065818 238066115 -12621739 - AluSc SINE Alu -10 299 1 3508 208 38 60 chr2 238066115 238066981 -12620873 - L1ME1 LINE L1 -42 6124 5240 2312 119 0 0 chr2 238066981 238067293 -12620561 - AluSx SINE Alu 0 312 1 3508 208 38 60 chr2 238067293 238067507 -12620347 - L1ME1 LINE L1 -926 5240 5065 2262 210 46 50 chr2 238067507 238068132 -12619722 - MLT1E2 LTR MaLR -2 624 2 3508 208 38 60 chr2 238068132 238068232 -12619622 - L1ME1 LINE L1 -1101 5065 4964 225 0 0 0 chr2 238068268 238068293 -12619561 + (T)n Simple_repeat Simple_repeat 1 25 0 1792 112 3 87 chr2 238070147 238070468 -12617386 - AluJo SINE Alu -18 294 1 1115 210 131 44 chr2 238071149 238071577 -12616277 + MER31B LTR ERV1 2 661 0 204 40 0 0 chr2 238071935 238071960 -12615894 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 641 281 77 55 chr2 238071968 238072384 -12615470 - L2 LINE L2 -38 3275 2851 183 260 52 13 chr2 238072427 238072504 -12615350 - L2 LINE L2 -586 2728 2649 3853 107 50 4 chr2 238072781 238073324 -12614530 + MER61E LTR ERV1 2 569 0 207 206 0 32 chr2 238073549 238073612 -12614242 + (CAAA)n Simple_repeat Simple_repeat 3 63 0 308 265 66 73 chr2 238073805 238073941 -12613913 - MER5A DNA MER1_type -28 161 27 1928 98 38 67 chr2 238074578 238074893 -12612961 - AluSx SINE Alu -6 306 1 3037 150 20 83 chr2 238076783 238076887 -12610967 - LTR9 LTR ERV1 0 612 503 2537 69 0 0 chr2 238076887 238077190 -12610664 + AluY SINE Alu 1 303 -8 3037 150 20 83 chr2 238077190 238077738 -12610116 - LTR9 LTR ERV1 -109 503 1 273 344 89 20 chr2 238079299 238079601 -12608253 + HAL1b LINE L1 385 707 -641 2411 81 0 0 chr2 238080096 238080391 -12607463 - AluSg SINE Alu -14 296 2 300 239 194 33 chr2 238080792 238080972 -12606882 + L1MC4a LINE L1 6340 6548 -1260 183 80 0 0 chr2 238080972 238080997 -12606857 + (GGATG)n Simple_repeat Simple_repeat 3 27 0 331 269 69 130 chr2 238081082 238081296 -12606558 + MLT1H-int LTR MaLR 1033 1218 -153 1778 142 29 44 chr2 238081296 238081612 -12606242 - AluJb SINE Alu -1 311 1 331 269 69 130 chr2 238081612 238081758 -12606096 + MLT1H-int LTR MaLR 1218 1371 0 722 233 44 17 chr2 238081758 238081938 -12605916 + MLT1H LTR MaLR 1 185 -364 558 255 20 20 chr2 238081939 238082092 -12605762 + MLT1H1 LTR MaLR 396 548 -7 1192 105 6 0 chr2 238082177 238082339 -12605515 + AluSg/x SINE Alu 150 312 0 1275 226 97 107 chr2 238082342 238083125 -12604729 + L1MC5 LINE L1 6890 7664 -297 1460 178 13 57 chr2 238083508 238083822 -12604032 - AluJo SINE Alu -12 300 1 536 212 79 69 chr2 238085119 238085297 -12602557 - MIR SINE MIR -46 216 34 2263 105 3 0 chr2 238085297 238085591 -12602263 - AluSx SINE Alu -17 295 1 536 212 79 69 chr2 238085591 238085615 -12602239 - MIR SINE MIR -228 34 12 260 283 47 0 chr2 238085639 238085745 -12602109 - MIR SINE MIR -128 134 24 1029 217 62 4 chr2 238087327 238087567 -12600287 + LTR52-int LTR ERVL 3 256 -3300 3693 180 34 13 chr2 238087581 238088265 -12599589 + LTR52-int LTR ERVL 1395 2092 -3593 2125 183 53 63 chr2 238088424 238088917 -12598937 + LTR52-int LTR ERVL 2210 2697 -859 1967 133 0 0 chr2 238090140 238090418 -12597436 - AluJb SINE Alu -11 301 24 680 124 108 70 chr2 238090463 238090592 -12597262 - AluJo SINE Alu -92 220 87 186 315 0 0 chr2 238093221 238093275 -12594579 - MIR3 SINE MIR -12 196 143 215 337 35 35 chr2 238095068 238095240 -12592614 - MIR SINE MIR -71 191 20 308 248 0 221 chr2 238095624 238095850 -12592004 + MER91B DNA MER1_type 1 176 -14 791 204 20 0 chr2 238096134 238096281 -12591573 + MER20 DNA MER1_type 70 219 0 300 203 0 31 chr2 238096530 238096594 -12591260 - MLT1I LTR MaLR -3 406 345 986 135 7 7 chr2 238096597 238096745 -12591109 + MER58A DNA MER1_type 1 148 0 698 302 70 12 chr2 238096782 238097040 -12590814 - MLT1I LTR MaLR -58 351 79 375 233 116 23 chr2 238097203 238097375 -12590479 + L1ME LINE L1 5490 5677 -444 420 235 59 17 chr2 238098069 238098188 -12589666 + L2 LINE L2 3187 3310 -3 9192 173 112 4 chr2 238098242 238101297 -12586557 - L1PB3 LINE L1 -2 6432 3041 6608 95 2 12 chr2 238101319 238102825 -12585029 - L1PA8A LINE L1 -28 6103 4612 * 11228 108 10 2 chr2 238102818 238104470 -12583384 + L1PA8A LINE L1 2942 4605 -1541 3341 173 76 3 chr2 238104468 238105466 -12582388 - L1PB3 LINE L1 -3368 3058 1517 * 752 159 8 15 chr2 238106044 238106176 -12581678 + FLAM_C SINE Alu 2 132 -11 228 319 14 0 chr2 238106182 238106278 -12581576 + A-rich Low_complexity Low_complexity 1 97 0 1752 169 18 0 chr2 238107070 238107349 -12580505 - AluSx SINE Alu -23 289 6 22 0 0 0 chr2 238107349 238107371 -12580483 + AT_rich Low_complexity Low_complexity 1 22 0 1035 153 74 5 chr2 238107984 238108200 -12579654 - AluSq SINE Alu -77 236 6 22 0 0 0 chr2 238108200 238108222 -12579632 + AT_rich Low_complexity Low_complexity 1 22 0 475 263 128 37 chr2 238108623 238108920 -12578934 + L1ME LINE L1 5469 5792 -329 8116 30 0 0 chr2 238109113 238110389 -12577465 - L1PA4 LINE L1 0 6155 4884 848 189 8 0 chr2 238110395 238110527 -12577327 - FLAM_C SINE Alu 0 133 1 323 219 49 20 chr2 238110568 238110668 -12577186 - MLT1I LTR MaLR 0 424 324 1033 228 58 90 chr2 238111014 238111172 -12576682 + MLT1J LTR MaLR 11 172 -339 1974 110 0 11 chr2 238111172 238111435 -12576419 - AluSx SINE Alu -14 298 39 1033 228 58 90 chr2 238111435 238111689 -12576165 + MLT1J LTR MaLR 172 410 -101 204 40 0 0 chr2 238111701 238111726 -12576128 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2281 119 0 0 chr2 238111781 238112084 -12575770 - AluSx SINE Alu -9 303 1 271 290 10 20 chr2 238112541 238112641 -12575213 + MIR SINE MIR 104 202 -60 526 285 40 22 chr2 238113159 238113387 -12574467 + MER106A DNA MER1_type 5 236 0 1944 225 28 39 chr2 238113812 238114270 -12573584 + Charlie1a DNA MER1_type 1 453 -1002 3443 161 32 14 chr2 238114272 238114929 -12572925 + Charlie1a DNA MER1_type 787 1455 0 1238 132 20 5 chr2 238116405 238116602 -12571252 + L1MB3 LINE L1 5983 6182 -1 22 35 0 0 chr2 238117180 238117209 -12570645 + AT_rich Low_complexity Low_complexity 1 29 0 200 164 73 18 chr2 238117753 238117808 -12570046 - L2 LINE L2 -845 2469 2412 * 351 291 234 6 chr2 238117798 238117973 -12569881 + L2 LINE L2 2750 2964 -350 403 340 47 23 chr2 238118268 238118483 -12569371 - L2 LINE L2 -926 2388 2169 329 286 263 12 chr2 238118747 238119086 -12568768 + L2 LINE L2 1738 2161 -1153 192 77 0 0 chr2 238119371 238119397 -12568457 + (TA)n Simple_repeat Simple_repeat 2 27 0 2318 183 20 60 chr2 238119433 238119969 -12567885 - LTR68 LTR ERV1 0 740 226 350 251 111 40 chr2 238120028 238120227 -12567627 + LTR40a LTR ERVL 307 519 0 924 287 117 32 chr2 238120243 238120749 -12567105 + L2 LINE L2 2302 2850 -464 272 309 147 91 chr2 238120920 238122445 -12565409 - L2 LINE L2 -1406 1908 299 429 328 86 5 chr2 238127114 238127300 -12560554 + MIR SINE MIR 12 212 -50 286 298 102 71 chr2 238128427 238128749 -12559105 - L2 LINE L2 -14 3299 2968 1474 199 84 34 chr2 238128964 238129345 -12558509 + MLT1C LTR MaLR 54 453 -14 2433 93 0 0 chr2 238129721 238130023 -12557831 + AluSx SINE Alu 1 302 -10 826 264 32 28 chr2 238130257 238130516 -12557338 - MIR SINE MIR 0 262 5 296 205 249 2 chr2 238131406 238131504 -12556350 - MIR SINE MIR -77 131 14 384 276 40 53 chr2 238131542 238131700 -12556154 + L1MB7 LINE L1 5267 5423 -936 2377 99 0 6 chr2 238131700 238132013 -12555841 + AluSx SINE Alu 1 311 -1 384 276 40 53 chr2 238132013 238132082 -12555772 + L1MB7 LINE L1 5423 5491 -868 413 291 91 6 chr2 238132083 238132248 -12555606 + L1MB7 LINE L1 5523 5701 -420 321 234 0 0 chr2 238133062 238133142 -12554712 + L1MB7 LINE L1 6026 6106 -61 258 220 8 152 chr2 238133417 238133479 -12554375 - MER103 DNA DNA -45 121 52 1670 143 0 31 chr2 238133479 238133737 -12554117 + AluJo SINE Alu 1 250 -62 258 220 8 152 chr2 238133737 238133758 -12554096 - MER103 DNA DNA -114 52 60 2447 86 0 0 chr2 238133758 238134059 -12553795 + AluSg SINE Alu 1 301 -9 258 220 8 152 chr2 238134059 238134106 -12553748 - MER103 DNA DNA -105 61 9 2026 137 0 16 chr2 238134700 238135006 -12552848 + AluSx SINE Alu 1 301 -11 815 198 45 96 chr2 238135109 238135195 -12552659 - L1ME2 LINE L1 -4 6162 6073 1387 191 110 22 chr2 238135195 238135468 -12552386 + AluJo SINE Alu 1 297 -5 815 198 45 96 chr2 238135468 238135728 -12552126 - L1ME2 LINE L1 -93 6073 5810 563 229 14 42 chr2 238135733 238135797 -12552057 - HERV16 LTR ERVL -2217 2779 2715 2269 108 0 0 chr2 238135797 238136092 -12551762 - AluSc SINE Alu -14 295 1 563 229 14 42 chr2 238136092 238136171 -12551683 - HERV16 LTR ERVL -2281 2715 2640 492 290 0 14 chr2 238136178 238136323 -12551531 + LTR67 LTR ERVL 413 555 -2 681 107 25 0 chr2 238137183 238137305 -12550549 + GA-rich Low_complexity Low_complexity 2 126 0 1587 131 5 0 chr2 238139398 238139619 -12548235 + AluSp SINE Alu 81 302 -11 1554 172 88 9 chr2 238139635 238139954 -12547900 - MER2 DNA MER2_type 0 344 1 5002 241 46 36 chr2 238140267 238142294 -12545560 - L1MCb LINE L1 -2494 4070 2065 1918 70 0 0 chr2 238142294 238142524 -12545330 - AluY SINE Alu -1 310 81 5002 241 46 36 chr2 238142524 238142849 -12545005 - L1MCb LINE L1 -4499 2065 1745 2512 208 53 67 chr2 238142849 238143550 -12544304 - LTR8 LTR ERV1 0 691 1 5002 241 46 36 chr2 238143550 238144544 -12543310 - L1MCb LINE L1 -4819 1745 508 2119 116 0 23 chr2 238144544 238144846 -12543008 - AluSg SINE Alu -15 295 1 5002 241 46 36 chr2 238144846 238145358 -12542496 - L1MCb LINE L1 -6056 508 3 22 0 0 0 chr2 238145916 238145938 -12541916 + AT_rich Low_complexity Low_complexity 1 22 0 523 87 0 0 chr2 238146173 238146242 -12541612 + Alu SINE Alu 229 297 -12 2139 211 41 19 chr2 238146321 238146833 -12541021 - Charlie1b DNA MER1_type 0 523 1 226 300 0 0 chr2 238146976 238147036 -12540818 - MLT1I LTR MaLR -1 408 349 341 274 59 22 chr2 238147063 238147198 -12540656 - MLT1I LTR MaLR -134 275 136 249 271 57 0 chr2 238147261 238147331 -12540523 - HAL1 LINE L1 -823 1684 1611 537 294 73 32 chr2 238147479 238147891 -12539963 - HAL1 LINE L1 -1327 1180 752 2586 56 3 3 chr2 238148706 238149012 -12538842 - AluY SINE Alu -5 306 1 1702 192 21 27 chr2 238149222 238149560 -12538294 - MLT2D LTR ERVL 0 414 79 230 56 28 0 chr2 238151260 238151296 -12536558 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 455 233 108 17 chr2 238151296 238151416 -12536438 - L2 LINE L2 -8 3264 3134 1185 146 35 5 chr2 238152057 238152256 -12535598 + MER2 DNA MER2_type 7 211 -134 2051 130 7 7 chr2 238152285 238152586 -12535268 - AluSx SINE Alu -11 301 1 3342 206 50 33 chr2 238152953 238154068 -12533786 + L1ME2 LINE L1 4943 6075 -89 251 340 97 19 chr2 238155491 238155697 -12532157 + L2 LINE L2 2629 2850 -464 201 244 0 22 chr2 238158340 238158385 -12529469 + GA-rich Low_complexity Low_complexity 4 47 0 669 157 0 0 chr2 238158705 238158839 -12529015 + (TCCA)n Simple_repeat Simple_repeat 2 135 0 551 310 89 57 chr2 238159796 238160325 -12527529 + L2 LINE L2 2196 2741 -573 5734 33 2 0 chr2 238168694 238169323 -12518531 + L1PA5 LINE L1 5520 6149 -5 2051 143 3 0 chr2 238170128 238170428 -12517426 + AluSx SINE Alu 1 301 -11 3171 117 51 4 chr2 238171084 238171570 -12516284 + MER75 DNA T2_type 6 514 0 222 37 0 0 chr2 238171721 238171748 -12516106 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 6260 108 8 4 chr2 238171753 238172039 -12515815 - L1PB1 LINE L1 -8 6859 6576 2107 116 0 30 chr2 238172039 238172341 -12515513 + AluSx SINE Alu 1 293 -19 6260 108 8 4 chr2 238172341 238172415 -12515439 - L1PB1 LINE L1 -291 6576 6504 263 91 0 23 chr2 238172415 238172459 -12515395 + (TA)n Simple_repeat Simple_repeat 1 43 0 6260 108 8 4 chr2 238172459 238173096 -12514758 - L1PB1 LINE L1 -363 6504 5858 12122 185 81 8 chr2 238173420 238173656 -12514198 - L1PB1 LINE L1 -1493 5369 5152 210 37 0 0 chr2 238173656 238173683 -12514171 + (TTG)n Simple_repeat Simple_repeat 2 28 0 12122 185 81 8 chr2 238173683 238178323 -12509531 - L1PB1 LINE L1 -1710 5152 139 263 203 34 0 chr2 238178557 238178616 -12509238 - MER89-int LTR ERV1 -3797 3004 2944 2031 228 93 40 chr2 238178932 238179524 -12508330 - MLT1E2 LTR MaLR 0 626 4 307 265 39 20 chr2 238179795 238179897 -12507957 - MER89-int LTR ERV1 -4445 2356 2253 472 191 148 26 chr2 238180572 238180687 -12507167 - FLAM_C SINE Alu -3 130 2 2346 100 0 3 chr2 238180719 238181028 -12506826 + AluSq SINE Alu 1 308 -5 1975 189 97 34 chr2 238183053 238183528 -12504326 + MLT1D LTR MaLR 1 505 0 1323 256 71 17 chr2 238183528 238184101 -12503753 + MLT1D-int LTR MaLR 1 610 -1008 537 256 26 97 chr2 238184201 238184272 -12503582 + MLT1D-int LTR MaLR 653 728 -643 6781 88 5 16 chr2 238184272 238184644 -12503210 + L1PA13 LINE L1 4391 4766 -1397 2686 105 5 30 chr2 238184644 238185017 -12502837 + THE1B LTR MaLR 1 364 0 6781 88 5 16 chr2 238185017 238186435 -12501419 + L1PA13 LINE L1 4766 6163 0 537 256 26 97 chr2 238186435 238186558 -12501296 + MLT1D-int LTR MaLR 728 833 -538 1501 211 144 24 chr2 238186558 238186975 -12500879 + MLT1D LTR MaLR 26 492 -13 236 278 28 0 chr2 238187279 238187387 -12500467 - L1ME LINE L1 -712 5450 5340 15360 137 42 6 chr2 238187526 238189859 -12497995 + Tigger1 DNA MER2_type 2 2418 0 2960 164 15 39 chr2 238190155 238191103 -12496751 - L1M2 LINE L1 -517 5795 4857 * 3813 174 53 7 chr2 238191098 238191859 -12495995 + L1M2 LINE L1 4079 4874 -1272 471 279 34 3 chr2 238191911 238192092 -12495762 - L1ME1 LINE L1 -5 6161 5969 652 256 0 0 chr2 238192092 238192221 -12495633 - FLAM_A SINE Alu -4 138 10 252 312 142 5 chr2 238192437 238192642 -12495212 - L1M4 LINE L1 -3594 2552 2320 27 96 0 0 chr2 238193052 238193135 -12494719 + AT_rich Low_complexity Low_complexity 1 83 0 336 357 56 30 chr2 238193144 238193449 -12494405 - HAL1 LINE L1 -755 1752 1440 276 264 37 102 chr2 238193471 238193687 -12494167 - L1MC4 LINE L1 -15 8027 7826 1799 241 51 17 chr2 238193724 238194250 -12493604 - L1ME2 LINE L1 -10 6154 5611 437 222 67 78 chr2 238194251 238194431 -12493423 - LTR40b LTR ERVL -160 302 125 356 225 275 25 chr2 238194535 238194695 -12493159 - LTR40a LTR ERVL -319 200 1 748 176 0 8 chr2 238194825 238194944 -12492910 + FLAM_C SINE Alu 3 120 -23 787 245 112 129 chr2 238195056 238196012 -12491842 - HERVL68 LTR ERVL -327 2710 1771 325 246 90 41 chr2 238195999 238196121 -12491733 - HERVL40 LTR ERVL -1650 3880 3753 * 227 202 121 61 chr2 238196825 238196924 -12490930 - MLT1J LTR MaLR 0 511 407 22 0 0 0 chr2 238197294 238197316 -12490538 + AT_rich Low_complexity Low_complexity 1 22 0 231 281 16 0 chr2 238199061 238199125 -12488729 - MER81 DNA DNA -2 112 48 249 297 27 0 chr2 238200682 238200756 -12487098 + MIR3 SINE MIR 83 158 -50 636 14 0 0 chr2 238200764 238200837 -12487017 + (TTTC)n Simple_repeat Simple_repeat 2 74 0 6549 61 31 5 chr2 238200840 238201721 -12486133 - L1PA7 LINE L1 -19 6135 5205 1868 126 19 0 chr2 238201821 238202083 -12485771 - AluSx SINE Alu -45 267 1 321 350 39 33 chr2 238203235 238203415 -12484439 + MIR SINE MIR 7 187 -75 3539 188 47 22 chr2 238203575 238204340 -12483514 - L1MB7 LINE L1 -10 6174 5391 1792 168 10 0 chr2 238205640 238205944 -12481910 - AluSx SINE Alu -5 307 1 187 345 61 34 chr2 238205973 238206121 -12481733 + L2 LINE L2 2978 3129 -143 1553 228 0 7 chr2 238208265 238208563 -12479291 + AluJb SINE Alu 1 296 -16 488 213 35 22 chr2 238209289 238209459 -12478395 - MER57A LTR ERV1 -4 399 196 646 198 43 56 chr2 238209462 238209624 -12478230 - MER93b LTR ERV1 -213 160 1 494 257 7 50 chr2 238211022 238211162 -12476692 - MER5B DNA MER1_type -19 159 26 433 278 16 16 chr2 238211198 238211324 -12476530 + MER5B DNA MER1_type 50 175 -3 10700 128 31 14 chr2 238211373 238213135 -12474719 + L1PBa LINE L1 3 1794 -5069 3044 265 17 14 chr2 238263136 238264103 -12423751 - L1M2 LINE L1 -4454 1897 940 2036 267 9 17 chr2 238264852 238265387 -12422467 - L1M2 LINE L1 -5746 535 5 255 286 169 13 chr2 238265397 238265628 -12422226 - L1MEd LINE L1 -4881 1238 972 607 195 0 0 chr2 238265641 238265754 -12422100 - L1MB8 LINE L1 0 6178 6066 1308 102 11 0 chr2 238265754 238265930 -12421924 + L1PB1 LINE L1 5970 6148 -3 1958 98 49 0 chr2 238266358 238266623 -12421231 + AluSg SINE Alu 1 278 -32 249 0 23 47 chr2 238266625 238266668 -12421186 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 2448 259 68 52 chr2 238266808 238267324 -12420530 - L1ME LINE L1 -545 5619 5113 2136 128 3 0 chr2 238267324 238267622 -12420232 + AluSx SINE Alu 1 299 -13 2448 259 68 52 chr2 238267622 238268674 -12419180 - L1ME LINE L1 -1051 5113 4027 2033 104 28 14 chr2 238268674 238268961 -12418893 - AluSg SINE Alu -19 291 1 2448 259 68 52 chr2 238268961 238269058 -12418796 - L1ME LINE L1 -2137 4027 3933 1709 148 0 19 chr2 238269058 238269328 -12418526 - AluJb SINE Alu -17 295 31 2035 100 33 7 chr2 238269328 238269628 -12418226 + LOR1-int LTR ERV1 647 954 -7166 909 153 0 0 chr2 238269628 238269759 -12418095 + AluJb SINE Alu 1 131 -181 7358 92 58 52 chr2 238269759 238269870 -12417984 + LOR1-int LTR ERV1 939 1048 -7072 2046 157 0 0 chr2 238269870 238270164 -12417690 + AluSq SINE Alu 1 294 -19 7358 92 58 52 chr2 238270164 238270295 -12417559 + LOR1-int LTR ERV1 1048 1177 -6943 2076 119 0 68 chr2 238270295 238270631 -12417223 + AluSq SINE Alu 1 313 0 7358 92 58 52 chr2 238270631 238271686 -12416168 + LOR1-int LTR ERV1 1177 2244 -5876 1576 213 54 3 chr2 238271688 238272076 -12415778 + L1P3 LINE L1 10 741 -5720 990 118 0 0 chr2 238272212 238272364 -12415490 + (TTTCC)n Simple_repeat Simple_repeat 5 156 0 255 203 0 0 chr2 238272364 238272423 -12415431 + CT-rich Low_complexity Low_complexity 4 62 0 529 83 0 83 chr2 238273229 238273313 -12414541 + MADE1 DNA Mariner 3 79 -1 231 247 10 21 chr2 238273810 238273907 -12413947 + (TA)n Simple_repeat Simple_repeat 2 97 0 189 74 0 0 chr2 238274169 238274196 -12413658 + (T)n Simple_repeat Simple_repeat 1 27 0 13571 139 12 27 chr2 238274239 238276570 -12411284 + L1P3 LINE L1 713 3008 -3453 3849 114 0 2 chr2 238276948 238277501 -12410353 - L1P LINE L1 -1644 4502 3951 2364 100 0 0 chr2 238277515 238277826 -12410028 - AluY SINE Alu 0 311 1 544 322 32 35 chr2 238277848 238278196 -12409658 - L1M4 LINE L1 -842 5304 4958 1143 165 0 0 chr2 238278445 238278621 -12409233 + AluSg/x SINE Alu 130 305 -5 3961 148 31 25 chr2 238278787 238279499 -12408355 + MSTA-int LTR MaLR 865 1580 0 2187 155 126 8 chr2 238279501 238279882 -12407972 + MSTA LTR MaLR 3 428 0 1029 251 9 33 chr2 238279915 238280268 -12407586 + MER21B LTR ERV1 13 426 -437 651 168 21 98 chr2 238280446 238280589 -12407265 + AluSx SINE Alu 56 187 -125 287 250 14 14 chr2 238280842 238280914 -12406940 + MER77 LTR ERV1 530 601 -4 325 325 70 9 chr2 238281124 238281352 -12406502 - L1M4 LINE L1 -3761 2385 2144 1997 123 146 49 chr2 238281554 238281773 -12406081 - MSTA LTR MaLR 0 428 232 2509 61 0 0 chr2 238281773 238282068 -12405786 - AluY SINE Alu -16 295 1 1997 123 146 49 chr2 238282068 238282238 -12405616 - MSTA LTR MaLR -196 232 1 325 134 0 134 chr2 238283147 238283266 -12404588 - AluSp/q SINE Alu -1 302 200 324 160 0 90 chr2 238283419 238283519 -12404335 - AluS SINE Alu -212 91 1 24 0 0 0 chr2 238284998 238285022 -12402832 + GC_rich Low_complexity Low_complexity 1 24 0 6579 54 40 1 chr2 238285474 238286271 -12401583 + L1PA6 LINE L1 5327 6154 0 18694 109 44 39 chr2 238286298 238287487 -12400367 + LOR1a-int LTR ERV1 2229 3410 -2536 2331 103 0 0 chr2 238287487 238287798 -12400056 - AluSx SINE Alu -1 311 1 18694 109 44 39 chr2 238287798 238288846 -12399008 + LOR1a-int LTR ERV1 3410 4451 -1495 2336 79 3 0 chr2 238288846 238289136 -12398718 + AluY SINE Alu 4 294 -17 18694 109 44 39 chr2 238289136 238289632 -12398222 + LOR1a-int LTR ERV1 4451 4943 -1003 2332 82 0 3 chr2 238289632 238289925 -12397929 + AluSg SINE Alu 1 292 -18 18694 109 44 39 chr2 238289925 238290344 -12397510 + LOR1a-int LTR ERV1 4943 4824 -1122 2345 107 3 0 chr2 238290344 238290653 -12397201 + AluSx SINE Alu 2 311 -1 18694 109 44 39 chr2 238290653 238290725 -12397129 + LOR1a-int LTR ERV1 4823 4893 -1053 1862 109 33 7 chr2 238290706 238290982 -12396872 + LOR1a-int LTR ERV1 5782 6064 -2056 * 617 111 11 0 chr2 238290981 238291071 -12396783 + LOR1a-int LTR ERV1 8030 8120 0 * 3327 139 20 2 chr2 238291071 238291559 -12396295 + LOR1a LTR ERV1 1 497 0 1838 174 0 3 chr2 238291693 238291986 -12395868 + AluJb SINE Alu 1 292 -20 468 195 128 67 chr2 238292375 238292539 -12395315 - MER5B DNA MER1_type -4 174 1 681 220 33 0 chr2 238292578 238292728 -12395126 - MER5A DNA MER1_type -18 171 17 727 214 42 18 chr2 238292744 238292912 -12394942 + MER5B DNA MER1_type 6 177 -1 475 331 12 0 chr2 238294480 238294640 -12393214 - ERVL LTR ERVL -1134 4630 4469 285 284 27 0 chr2 238294998 238295072 -12392782 - LTR33 LTR ERVL -444 77 2 1455 223 17 31 chr2 238296195 238296554 -12391300 - MLT1A1 LTR MaLR -11 354 1 7959 174 39 14 chr2 238297807 238299210 -12388644 + L1PA14 LINE L1 3919 5389 -772 2157 98 25 0 chr2 238299210 238299495 -12388359 - AluSp SINE Alu -19 294 3 7959 174 39 14 chr2 238299495 238300271 -12387583 + L1PA14 LINE L1 5389 6144 -17 27 0 0 0 chr2 238300298 238300325 -12387529 + AT_rich Low_complexity Low_complexity 1 27 0 320 294 24 16 chr2 238300566 238300692 -12387162 - ERVL LTR ERVL -745 5019 4893 2442 77 0 0 chr2 238300698 238300996 -12386858 - AluY SINE Alu -13 298 1 597 161 29 66 chr2 238301056 238301193 -12386661 - MER34C LTR ERV1 0 585 454 255 204 0 0 chr2 238301209 238301263 -12386591 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 370 169 0 15 chr2 238301263 238301328 -12386526 - MER34C LTR ERV1 -111 474 411 661 319 67 31 chr2 238301364 238301961 -12385893 + ERVL LTR ERVL 2018 2664 -3100 374 244 49 32 chr2 238302103 238302226 -12385628 + ERVL LTR ERVL 1612 1736 -4028 1297 213 25 47 chr2 238302235 238302672 -12385182 - MER49 LTR ERV1 -168 755 141 1784 157 109 66 chr2 238302706 238302929 -12384925 + MER4A LTR ERV1 1 213 -252 2030 110 17 17 chr2 238302929 238303220 -12384634 + AluSx SINE Alu 1 291 -21 1784 157 109 66 chr2 238303220 238303563 -12384291 + MER4A LTR ERV1 213 445 -20 1205 177 0 31 chr2 238303854 238304080 -12383774 + AluJb SINE Alu 85 303 -9 585 274 16 21 chr2 238304499 238304689 -12383165 + MLT1J1 LTR MaLR 238 426 -20 546 269 0 28 chr2 238304911 238305056 -12382798 + MLT1J1 LTR MaLR 8 148 -298 282 250 0 0 chr2 238305089 238305149 -12382705 + MLT1J1 LTR MaLR 237 296 -150 298 274 30 85 chr2 238305152 238305208 -12382646 + MLT1J2 LTR MaLR 293 351 -99 1906 170 0 0 chr2 238305208 238305502 -12382352 - AluJb SINE Alu -18 294 1 298 274 30 85 chr2 238305502 238305609 -12382245 + MLT1J2 LTR MaLR 351 447 -3 1713 155 7 38 chr2 238306085 238306217 -12381637 + AluJb SINE Alu 2 137 -278 2389 81 0 0 chr2 238306217 238306513 -12381341 + AluY SINE Alu 1 296 -15 1713 155 7 38 chr2 238306513 238306803 -12381051 + AluJb SINE Alu 137 415 0 1973 164 0 13 chr2 238307008 238307319 -12380535 - AluJo SINE Alu -3 309 3 10500 128 25 17 chr2 238307486 238309114 -12378740 + L1PA10 LINE L1 3760 5372 -796 1974 98 0 64 chr2 238309114 238309409 -12378445 + AluY SINE Alu 3 278 -33 216 0 0 0 chr2 238309409 238309433 -12378421 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 10500 128 25 17 chr2 238309433 238310193 -12377661 + L1PA10 LINE L1 5371 6165 -3 295 318 62 68 chr2 238310789 238310981 -12376873 + MLT1J1 LTR MaLR 247 437 -9 822 128 90 15 chr2 238311034 238311192 -12376662 + FRAM SINE Alu 11 176 0 1006 243 46 68 chr2 238312518 238312974 -12374880 + MLT1J1 LTR MaLR 1 446 0 554 225 40 59 chr2 238313266 238313458 -12374396 + L1ME3A LINE L1 2396 2620 -4014 2185 114 0 10 chr2 238313458 238313757 -12374097 + AluSg SINE Alu 3 298 -12 554 225 40 59 chr2 238313757 238313866 -12373988 + L1ME3A LINE L1 2620 2730 -3904 1423 204 67 80 chr2 238313912 238314436 -12373418 + MER34 LTR ERV1 10 526 -16 4199 264 68 43 chr2 238314455 238315893 -12371961 + L1ME3A LINE L1 2747 4147 -2411 2129 147 0 0 chr2 238315893 238316192 -12371662 + AluSx SINE Alu 1 299 -13 4199 264 68 43 chr2 238316192 238316279 -12371575 + L1ME3A LINE L1 4147 4230 -2328 1976 142 0 17 chr2 238316279 238316575 -12371279 + AluJb SINE Alu 5 295 -17 4199 264 68 43 chr2 238316575 238316672 -12371182 + L1ME3A LINE L1 4230 4323 -2235 2000 106 28 14 chr2 238316672 238316955 -12370899 + AluSg SINE Alu 1 287 -23 4199 264 68 43 chr2 238316955 238318012 -12369842 + L1ME3A LINE L1 4323 5528 -1030 2119 131 3 0 chr2 238318012 238318309 -12369545 - AluSx SINE Alu -14 298 1 4199 264 68 43 chr2 238318309 238318994 -12368860 + L1ME3A LINE L1 5528 6194 -364 352 236 11 11 chr2 238318981 238319070 -12368784 - L1ME3A LINE L1 -248 6320 6232 * 441 194 87 53 chr2 238319074 238319280 -12368574 + L1ME3A LINE L1 6346 6558 -6 35 0 0 0 chr2 238319301 238319336 -12368518 + AT_rich Low_complexity Low_complexity 1 35 0 1940 173 19 8 chr2 238319529 238319904 -12367950 + MSTD LTR MaLR 1 379 -17 198 0 0 0 chr2 238319908 238319930 -12367924 + (A)n Simple_repeat Simple_repeat 1 22 0 254 242 16 0 chr2 238320480 238320542 -12367312 + MLT1J1 LTR MaLR 261 323 -123 215 259 6 107 chr2 238320981 238321145 -12366709 + MIR SINE MIR 52 192 -62 549 157 49 0 chr2 238321216 238321318 -12366536 + LTR65 LTR ERV1 5 111 -558 2357 89 0 19 chr2 238321321 238321635 -12366219 + AluSg SINE Alu 1 308 -2 234 0 0 0 chr2 238321706 238321732 -12366122 + (A)n Simple_repeat Simple_repeat 1 26 0 273 235 15 0 chr2 238321780 238321848 -12366006 + LTR65 LTR ERV1 129 197 -472 1372 209 14 7 chr2 238322117 238322395 -12365459 + AluJo SINE Alu 3 282 -30 2249 115 0 0 chr2 238322628 238322924 -12364930 + AluSq SINE Alu 1 296 -17 305 315 0 55 chr2 238323068 238323195 -12364659 + MIR SINE MIR 65 184 -78 2453 67 0 3 chr2 238323349 238323649 -12364205 - AluY SINE Alu -12 299 1 433 276 97 51 chr2 238323931 238324188 -12363666 - MER21B LTR ERV1 -148 715 447 673 176 0 70 chr2 238324398 238324540 -12363314 - AluSx SINE Alu -125 187 56 936 254 9 29 chr2 238324718 238325071 -12362783 - MER21B LTR ERV1 -437 426 13 2013 155 126 8 chr2 238325104 238325485 -12362369 - MSTA LTR MaLR 0 428 3 6116 155 14 20 chr2 238325487 238326591 -12361263 - MSTA-int LTR MaLR 0 1580 483 22 0 0 0 chr2 238326914 238326936 -12360918 + AT_rich Low_complexity Low_complexity 1 22 0 3231 138 2 0 chr2 238328671 238329209 -12358645 - MSTA-int LTR MaLR -1112 539 1 2183 138 122 8 chr2 238329209 238329593 -12358261 - MSTA LTR MaLR 0 428 1 203 228 43 33 chr2 238330183 238330275 -12357579 + CT-rich Low_complexity Low_complexity 3 95 0 2338 86 0 0 chr2 238331051 238331341 -12356513 + AluY SINE Alu 1 290 -21 31 0 0 0 chr2 238331341 238331372 -12356482 + AT_rich Low_complexity Low_complexity 1 31 0 1951 141 6 26 chr2 238331453 238331766 -12356088 + AluSx SINE Alu 1 307 -5 196 115 58 96 chr2 238331904 238331956 -12355898 - L2 LINE L2 -33 3280 3231 2287 100 3 0 chr2 238332546 238332846 -12355008 - AluSp SINE Alu -11 302 2 200 182 0 0 chr2 238332913 238332946 -12354908 + GA-rich Low_complexity Low_complexity 1 33 0 1895 153 7 0 chr2 238335681 238335968 -12351886 + AluJo SINE Alu 1 289 -23 2276 46 7 4 chr2 238335978 238336283 -12351571 + AluY SINE Alu 1 306 0 267 103 0 0 chr2 238336282 238336321 -12351533 + (CATA)n Simple_repeat Simple_repeat 2 40 0 198 0 0 0 chr2 238336320 238336342 -12351512 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 2135 128 0 19 chr2 238336378 238336690 -12351164 - AluSx SINE Alu -6 306 1 1466 203 25 9 chr2 238337133 238337459 -12350395 + L1MB5 LINE L1 5717 6047 -127 229 204 0 19 chr2 238337833 238337887 -12349967 + GA-rich Low_complexity Low_complexity 2 54 0 383 296 127 46 chr2 238340284 238340892 -12346962 - L1MC4a LINE L1 -361 5801 5262 24 32 0 0 chr2 238341140 238341171 -12346683 + AT_rich Low_complexity Low_complexity 1 31 0 359 296 174 8 chr2 238341804 238342189 -12345665 - L1MC4a LINE L1 -1311 4835 4387 2649 186 103 28 chr2 238342196 238342877 -12344977 + MER44D DNA MER2_type 2 605 0 419 273 84 77 chr2 238343155 238343727 -12344127 - L1MC4a LINE L1 -1722 4424 3849 2037 240 103 71 chr2 238343872 238344533 -12343321 - HAL1 LINE L1 -129 2378 1739 195 42 0 0 chr2 238344533 238344557 -12343297 + (TA)n Simple_repeat Simple_repeat 2 25 0 2037 240 103 71 chr2 238344557 238345463 -12342391 - HAL1 LINE L1 -768 1739 762 252 278 76 73 chr2 238345494 238345796 -12342058 - HAL1 LINE L1 -2197 310 8 377 334 5 15 chr2 238345801 238346031 -12341823 - L1MC4a LINE L1 -2293 3853 3625 1019 311 61 63 chr2 238346252 238347011 -12340843 - L1MC4a LINE L1 -2707 3439 2683 377 262 40 40 chr2 238347193 238347342 -12340512 - MER41E LTR ERV1 -50 462 314 2316 93 0 7 chr2 238347419 238347720 -12340134 + AluSx SINE Alu 1 299 -13 1860 163 51 0 chr2 238348051 238348406 -12339448 - L1MA9 LINE L1 -11 6301 5929 6261 220 46 36 chr2 238348429 238350202 -12337652 - L1 LINE L1 -2125 4257 2454 2204 106 10 0 chr2 238350202 238350495 -12337359 - AluSx SINE Alu -16 296 1 6261 220 46 36 chr2 238350495 238350936 -12336918 - L1 LINE L1 -3928 2454 2019 237 182 0 0 chr2 238350942 238350983 -12336871 - MSTA LTR MaLR 0 428 388 225 159 45 0 chr2 238350983 238351027 -12336827 + Alu SINE Alu 1 46 -256 21 36 0 0 chr2 238351681 238351709 -12336145 + AT_rich Low_complexity Low_complexity 1 28 0 1118 263 64 77 chr2 238351949 238352517 -12335337 - L2 LINE L2 -3 3310 2735 385 300 122 31 chr2 238352548 238352895 -12334959 - L1ME LINE L1 -499 5665 5281 1627 142 15 0 chr2 238353100 238353361 -12334493 - L1PA11 LINE L1 -4 6170 5906 1368 58 5 5 chr2 238353361 238353551 -12334303 + L1PA11 LINE L1 5705 5894 -269 402 293 144 35 chr2 238353667 238353862 -12333992 - L1ME LINE L1 -1637 4509 4337 2225 134 16 13 chr2 238353862 238354234 -12333620 + THE1C LTR MaLR 3 375 0 402 293 144 35 chr2 238354234 238354386 -12333468 - L1ME LINE L1 -1809 4337 4124 411 313 0 0 chr2 238354388 238354567 -12333287 + (TA)n Simple_repeat Simple_repeat 1 179 0 2030 101 43 0 chr2 238355082 238355400 -12332454 - AluSg SINE Alu 0 310 1 5450 86 20 62 chr2 238355828 238356193 -12331661 - L1PB1 LINE L1 -3 6148 5770 315 0 0 0 chr2 238356193 238356228 -12331626 + (CA)n Simple_repeat Simple_repeat 2 36 0 5450 86 20 62 chr2 238356228 238356789 -12331065 - L1PB1 LINE L1 -381 5770 5260 1817 172 75 77 chr2 238356790 238357091 -12330763 - L1PB1 LINE L1 -1446 4700 4399 234 0 0 0 chr2 238357091 238357117 -12330737 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1817 172 75 77 chr2 238357117 238357403 -12330451 - L1PB1 LINE L1 -1747 4399 4114 198 103 0 0 chr2 238357541 238357570 -12330284 + (GGAA)n Simple_repeat Simple_repeat 3 31 0 1432 238 82 39 chr2 238357590 238359266 -12328588 + L1ME2 LINE L1 4020 6006 -158 315 218 120 105 chr2 238359433 238359566 -12328288 - HAL1 LINE L1 -2310 197 63 322 330 18 18 chr2 238361933 238362042 -12325812 - L2 LINE L2 -9 3263 3155 22 0 0 0 chr2 238363138 238363160 -12324694 + AT_rich Low_complexity Low_complexity 1 22 0 1748 186 7 0 chr2 238363642 238363949 -12323905 - AluJo SINE Alu -3 309 1 2125 250 72 10 chr2 238364836 238365507 -12322347 - MER21B LTR ERV1 -54 809 98 254 244 37 12 chr2 238365567 238365649 -12322205 - MER21B LTR ERV1 -778 85 2 364 321 113 24 chr2 238365901 238366069 -12321785 - MIR SINE MIR -74 188 6 207 0 0 0 chr2 238367852 238367875 -12319979 + (TTGG)n Simple_repeat Simple_repeat 1 23 0 2895 158 35 27 chr2 238367896 238368516 -12319338 - L1MA8 LINE L1 -3 7248 6624 480 184 0 0 chr2 238368575 238368662 -12319192 + Tigger5 DNA MER2_type 2237 2323 0 14191 196 42 32 chr2 238368662 238369721 -12318133 - L1MA8 LINE L1 -642 6630 5582 2124 125 10 3 chr2 238369721 238370016 -12317838 - AluSq SINE Alu -16 297 1 14191 196 42 32 chr2 238370016 238370545 -12317309 - L1MA8 LINE L1 -1690 5582 5059 2569 98 30 11 chr2 238370545 238370913 -12316941 - THE1C LTR MaLR 0 375 1 14191 196 42 32 chr2 238370913 238372601 -12315253 - L1MA8 LINE L1 -2213 5059 3388 1637 193 43 13 chr2 238372601 238372902 -12314952 - AluJo SINE Alu 0 312 3 14191 196 42 32 chr2 238372902 238375367 -12312487 - L1MA8 LINE L1 -3884 3388 7 2068 191 33 7 chr2 238375627 238376047 -12311807 - Tigger2a DNA MER2_type -3 431 1 261 309 87 13 chr2 238376959 238377108 -12310746 + L2 LINE L2 2174 2333 -981 360 131 0 72 chr2 238377119 238377197 -12310657 - MLT1H1 LTR MaLR 0 549 478 495 333 98 27 chr2 238377205 238377611 -12310243 + L2 LINE L2 2514 2948 -366 657 260 128 7 chr2 238377612 238377893 -12309961 + L1ME3A LINE L1 5567 5881 -289 308 279 34 41 chr2 238377988 238378135 -12309719 + L1ME3A LINE L1 5911 6056 -114 2958 3 0 0 chr2 238378145 238378463 -12309391 - AluYb8 SINE Alu 0 318 1 27 0 0 0 chr2 238378544 238378571 -12309283 + AT_rich Low_complexity Low_complexity 1 27 0 1999 170 0 0 chr2 238379207 238379518 -12308336 + AluJb SINE Alu 1 311 -1 226 214 107 84 chr2 238382196 238382327 -12305527 - MIR SINE MIR -12 250 117 1747 163 6 56 chr2 238382351 238382496 -12305358 + AluJb SINE Alu 1 152 -160 2143 127 0 0 chr2 238382496 238382787 -12305067 + AluSg SINE Alu 1 291 -19 1747 163 6 56 chr2 238382787 238382961 -12304893 + AluJb SINE Alu 152 304 -8 2401 104 0 0 chr2 238382961 238383298 -12304556 + L1PA14 LINE L1 5823 6159 -2 2240 126 0 0 chr2 238383443 238383744 -12304110 + AluSx SINE Alu 1 301 -11 283 307 59 0 chr2 238384189 238384290 -12303564 - MLT1J1 LTR MaLR -103 343 237 2246 110 72 17 chr2 238384973 238385318 -12302536 - THE1B LTR MaLR 0 364 1 357 145 13 79 chr2 238385608 238385684 -12302170 - MIR SINE MIR -78 184 114 668 281 29 50 chr2 238385767 238386066 -12301788 - MER46C DNA MER2_type -4 334 41 1989 138 0 41 chr2 238386066 238386385 -12301469 + AluJb SINE Alu 1 306 -6 668 281 29 50 chr2 238386385 238386426 -12301428 - MER46C DNA MER2_type -297 41 1 21 0 0 0 chr2 238386720 238386741 -12301113 + AT_rich Low_complexity Low_complexity 1 21 0 505 267 50 11 chr2 238386791 238386971 -12300883 - MLT1J1 LTR MaLR -22 424 238 219 313 30 20 chr2 238388147 238388246 -12299608 - MIR SINE MIR -60 202 103 290 327 18 0 chr2 238388438 238388548 -12299306 + (TA)n Simple_repeat Simple_repeat 1 112 0 182 37 37 0 chr2 238389172 238389199 -12298655 + (CA)n Simple_repeat Simple_repeat 1 28 0 2382 95 0 0 chr2 238389690 238389996 -12297858 + AluY SINE Alu 1 306 -5 423 224 20 118 chr2 238390393 238390638 -12297216 + L2 LINE L2 2185 2405 -909 220 325 8 67 chr2 238391645 238391765 -12296089 - MIR SINE MIR -73 189 77 5427 175 7 5 chr2 238392066 238393975 -12293879 - L1PA16 LINE L1 -1 6165 4255 606 312 31 61 chr2 238394323 238394397 -12293457 - L1M4 LINE L1 -757 5389 5314 2260 110 7 0 chr2 238394397 238394706 -12293148 - AluY SINE Alu 0 311 1 606 312 31 61 chr2 238394706 238395076 -12292778 - L1M4 LINE L1 -832 5314 4958 1093 177 0 0 chr2 238395325 238395500 -12292354 + AluSg/x SINE Alu 132 306 -6 2247 121 0 0 chr2 238396365 238396662 -12291192 - AluSx SINE Alu -15 297 1 748 268 67 73 chr2 238397481 238397809 -12290045 + L2 LINE L2 2986 3311 -2 363 145 0 0 chr2 238398530 238398599 -12289255 + (TGG)n Simple_repeat Simple_repeat 1 69 0 1764 312 102 12 chr2 238398599 238399500 -12288354 + L2 LINE L2 2084 3063 -250 712 11 0 22 chr2 238399500 238399591 -12288263 - L1PA2 LINE L1 -4 6151 6063 1764 312 102 12 chr2 238399591 238399623 -12288231 + L2 LINE L2 3063 3091 -222 330 284 97 13 chr2 238399628 238399783 -12288071 - L1M4 LINE L1 -937 5209 5042 347 295 107 21 chr2 238399820 238400054 -12287800 + LTR16C LTR ERVL 220 473 -18 708 247 75 27 chr2 238400243 238400575 -12287279 - L1M4 LINE L1 -1301 4845 4498 1022 272 161 9 chr2 238400595 238401259 -12286595 - L2 LINE L2 0 3313 2535 3192 188 30 11 chr2 238401296 238401933 -12285921 + MER82 DNA MER2_type 1 649 -4 251 257 0 0 chr2 238401961 238402031 -12285823 - L1M4 LINE L1 -1528 4618 4549 413 291 77 28 chr2 238402188 238402370 -12285484 - L1M4 LINE L1 -1746 4400 4210 1387 193 74 4 chr2 238402482 238402634 -12285220 - AluJo SINE Alu -24 288 148 323 0 0 45 chr2 238402634 238402678 -12285176 + (TTTTA)n Simple_repeat Simple_repeat 1 42 0 1387 193 74 4 chr2 238402678 238402794 -12285060 - AluJo SINE Alu -164 148 1 306 272 48 32 chr2 238402807 238402932 -12284922 - L1M4 LINE L1 -3145 3001 2875 371 330 61 9 chr2 238403122 238403352 -12284502 - L1M4 LINE L1 -3761 2385 2144 889 156 39 45 chr2 238403554 238403765 -12284089 - THE1C LTR MaLR 0 375 181 23625 109 16 9 chr2 238403773 238405942 -12281912 - L1PA8A LINE L1 -27 6419 4266 2257 107 3 0 chr2 238405942 238406252 -12281602 - AluY SINE Alu 0 311 1 23625 109 16 9 chr2 238406252 238408707 -12279147 - L1PA8A LINE L1 -2180 4266 1771 2922 113 9 17 chr2 238408696 238409163 -12278691 - L1PA8A LINE L1 -4923 952 490 * 794 128 174 12 chr2 238409163 238409335 -12278519 - THE1C LTR MaLR -226 202 3 411 239 0 0 chr2 238409346 238409434 -12278420 + MLT1J1 LTR MaLR 76 163 -283 1693 179 14 4 chr2 238409866 238410145 -12277709 - AluJo SINE Alu -30 282 1 510 273 46 28 chr2 238410393 238410609 -12277245 - HAL1b LINE L1 -861 487 268 2123 137 3 0 chr2 238410750 238411056 -12276798 - AluSx SINE Alu -5 307 1 1672 174 50 7 chr2 238411299 238411597 -12276257 - AluSx SINE Alu -1 311 1 473 245 97 7 chr2 238412359 238412514 -12275340 - MLT1J LTR MaLR -332 179 11 2212 103 10 3 chr2 238412857 238413148 -12274706 - AluSx SINE Alu -7 305 13 217 303 0 30 chr2 238413241 238413340 -12274514 + CT-rich Low_complexity Low_complexity 4 99 0 222 247 10 21 chr2 238413466 238413563 -12274291 + (TA)n Simple_repeat Simple_repeat 2 97 0 488 83 0 83 chr2 238414060 238414144 -12273710 - MADE1 DNA Mariner -1 79 3 554 225 40 59 chr2 238415083 238415275 -12272579 + L1MDa LINE L1 2396 2620 -4014 2185 114 0 10 chr2 238415275 238415574 -12272280 + AluSg SINE Alu 3 298 -12 554 225 40 59 chr2 238415574 238415683 -12272171 + L1MDa LINE L1 2620 2730 -3904 1444 208 63 76 chr2 238415729 238416253 -12271601 + MER34 LTR ERV1 10 526 -16 2382 268 70 30 chr2 238416272 238417710 -12270144 + L1MDa LINE L1 2747 4251 -2289 2075 154 0 0 chr2 238417710 238418009 -12269845 + AluSx SINE Alu 1 299 -13 2382 268 70 30 chr2 238418009 238418096 -12269758 + L1MDa LINE L1 4251 4333 -2207 1984 134 10 3 chr2 238418096 238418386 -12269468 + AluSq SINE Alu 5 296 -17 305 315 0 55 chr2 238418530 238418657 -12269197 + MIR SINE MIR 65 184 -78 2463 63 0 3 chr2 238418811 238419111 -12268743 - AluY SINE Alu -12 299 1 215 259 6 107 chr2 238419676 238419840 -12268014 + MIR SINE MIR 52 192 -62 549 157 49 0 chr2 238419911 238420013 -12267841 + LTR65 LTR ERV1 5 111 -558 2028 94 6 38 chr2 238420016 238420334 -12267520 + AluSg SINE Alu 1 308 -2 273 235 15 0 chr2 238420469 238420537 -12267317 + LTR65 LTR ERV1 129 197 -472 1913 157 3 0 chr2 238420806 238421092 -12266762 + AluJo SINE Alu 3 289 -23 2159 56 0 4 chr2 238421102 238421368 -12266486 + AluY SINE Alu 1 265 -46 264 318 183 0 chr2 238421557 238421683 -12266171 + MIR SINE MIR 106 254 -8 25 31 0 0 chr2 238422064 238422096 -12265758 + AT_rich Low_complexity Low_complexity 1 32 0 200 178 0 151 chr2 238422459 238422532 -12265322 + MIR3 SINE MIR 122 183 -25 195 100 0 0 chr2 238422995 238423025 -12264829 + (TC)n Simple_repeat Simple_repeat 2 31 0 * 479 187 6 0 chr2 238423024 238423195 -12264659 + (TA)n Simple_repeat Simple_repeat 1 172 0 183 184 0 0 chr2 238423585 238423623 -12264231 + GA-rich Low_complexity Low_complexity 4 41 0 979 129 6 6 chr2 238423623 238423793 -12264061 + (GGAGA)n Simple_repeat Simple_repeat 4 173 0 331 286 168 0 chr2 238424204 238424323 -12263531 + MIR SINE MIR 106 244 -18 25 31 0 0 chr2 238424711 238424743 -12263111 + AT_rich Low_complexity Low_complexity 1 32 0 200 178 0 151 chr2 238425106 238425179 -12262675 + MIR3 SINE MIR 122 183 -25 210 71 0 0 chr2 238425642 238425670 -12262184 + (TC)n Simple_repeat Simple_repeat 2 29 0 29 28 0 0 chr2 238426312 238426348 -12261506 + AT_rich Low_complexity Low_complexity 1 36 0 1800 136 10 33 chr2 238427133 238427434 -12260420 + AluSx SINE Alu 1 294 -18 1974 123 3 45 chr2 238428044 238428353 -12259501 - AluSx SINE Alu -16 296 1 621 247 20 7 chr2 238428625 238428775 -12259079 + MIR SINE MIR 101 252 -10 751 233 109 0 chr2 238428917 238429119 -12258735 + MER58A DNA MER1_type 1 224 0 1043 220 46 7 chr2 238429524 238429806 -12258048 - L1MA4 LINE L1 -8 6292 6000 1779 234 39 2 chr2 238430543 238430957 -12256897 - MER68 LTR ERV1 -4 558 130 557 141 96 119 chr2 238431186 238431363 -12256491 - MER68 LTR ERV1 -389 173 1 294 388 8 8 chr2 238431570 238431704 -12256150 + MIR3 SINE MIR 12 145 -63 387 0 0 0 chr2 238432950 238432993 -12254861 + (CA)n Simple_repeat Simple_repeat 2 44 0 1608 187 60 17 chr2 238433268 238433567 -12254287 + 7SLRNA srpRNA srpRNA 1 312 -8 2134 118 0 13 chr2 238434479 238434784 -12253070 - AluSx SINE Alu -10 302 2 543 31 0 0 chr2 238435085 238435150 -12252704 + (CA)n Simple_repeat Simple_repeat 1 65 0 2036 100 61 0 chr2 238436642 238436921 -12250933 - AluSc SINE Alu -11 298 3 1888 141 105 114 chr2 238437970 238438007 -12249847 - LTR44 LTR ERV1 0 519 483 1865 160 7 3 chr2 238438007 238438294 -12249560 - AluJb SINE Alu -24 288 1 1888 141 105 114 chr2 238438294 238438406 -12249448 - LTR44 LTR ERV1 -36 483 371 2306 117 3 0 chr2 238438406 238438715 -12249139 - AluSg SINE Alu 0 310 1 1888 141 105 114 chr2 238438715 238438737 -12249117 - LTR44 LTR ERV1 -148 371 350 3169 154 0 35 chr2 238438737 238439283 -12248571 - MER1A DNA MER1_type 0 527 1 1888 141 105 114 chr2 238439283 238439633 -12248221 - LTR44 LTR ERV1 -169 350 1 463 119 0 48 chr2 238439972 238440056 -12247798 - MADE1 DNA Mariner 0 80 1 2585 164 29 53 chr2 238440351 238441055 -12246799 - LTR49-int LTR ERV1 -632 5699 5193 251 161 0 16 chr2 238441693 238441755 -12246099 + GA-rich Low_complexity Low_complexity 2 62 0 3721 180 71 62 chr2 238442218 238443606 -12244248 - LTR49-int LTR ERV1 -1032 3904 2349 2103 135 0 26 chr2 238443606 238443918 -12243936 + AluSx SINE Alu 1 304 -8 3721 180 71 62 chr2 238443918 238445080 -12242774 - LTR49-int LTR ERV1 -2587 2349 1199 886 151 81 11 chr2 238445085 238445270 -12242584 - LTR49-int LTR ERV1 -3388 2943 2746 2322 154 122 0 chr2 238446782 238447223 -12240631 - LTR44 LTR ERV1 0 519 25 2618 172 33 2 chr2 238447321 238447803 -12240051 + LOR1a LTR ERV1 1 497 0 2028 164 22 6 chr2 238447803 238448168 -12239686 + LOR1a-int LTR ERV1 1 371 -7749 3953 101 58 68 chr2 238448191 238448600 -12239254 + LOR1-int LTR ERV1 217 629 -7491 2157 107 0 32 chr2 238448600 238448908 -12238946 - AluSc SINE Alu -5 304 7 3953 101 58 68 chr2 238448908 238448942 -12238912 + LOR1-int LTR ERV1 629 662 -7458 1940 140 0 0 chr2 238448942 238449213 -12238641 - AluSx SINE Alu -11 301 31 3953 101 58 68 chr2 238449213 238449499 -12238355 + LOR1-int LTR ERV1 662 939 -7181 918 153 0 0 chr2 238449513 238449644 -12238210 + AluJb SINE Alu 1 131 -181 6866 88 57 52 chr2 238449644 238449755 -12238099 + LOR1-int LTR ERV1 939 1048 -7072 2069 157 0 0 chr2 238449755 238450049 -12237805 + AluSq SINE Alu 1 294 -19 6866 88 57 52 chr2 238450049 238450180 -12237674 + LOR1-int LTR ERV1 1048 1177 -6943 2155 113 0 66 chr2 238450180 238450515 -12237339 + AluSq SINE Alu 1 313 0 6866 88 57 52 chr2 238450515 238451571 -12236283 + LOR1-int LTR ERV1 1177 2244 -5876 31807 104 14 12 chr2 238451573 238456662 -12231192 + L1P LINE L1 11 5107 -1039 2439 100 0 0 chr2 238457758 238458067 -12229787 + AluSx SINE Alu 1 309 -3 1729 183 0 16 chr2 238458098 238458404 -12229450 + AluJo SINE Alu 3 303 -9 988 262 15 15 chr2 238458835 238459163 -12228691 + L1ME LINE L1 3519 3846 -2300 637 160 0 0 chr2 238459171 238459271 -12228583 + U6 snRNA snRNA 2 101 -6 2395 81 14 3 chr2 238459287 238459584 -12228270 + AluSg SINE Alu 1 300 -10 2307 231 72 36 chr2 238459590 238461302 -12226552 + L1ME LINE L1 3850 5652 -518 1708 114 35 24 chr2 238461452 238461706 -12226148 + AluSx SINE Alu 54 310 -2 1577 116 155 52 chr2 238461707 238461897 -12225957 - MSTA LTR MaLR -29 399 230 2307 82 3 0 chr2 238461897 238462191 -12225663 - AluY SINE Alu -16 295 1 1577 116 155 52 chr2 238462191 238462362 -12225492 - MSTA LTR MaLR -198 230 1 2722 270 18 16 chr2 238462470 238463738 -12224116 - L1M2 LINE L1 -4161 2190 940 323 299 24 24 chr2 238464235 238464402 -12223452 - L1M2 LINE L1 -5516 765 599 2185 261 16 28 chr2 238464451 238465064 -12222790 - L1M2 LINE L1 -5671 610 5 311 288 141 6 chr2 238465069 238465239 -12222615 - HAL1 LINE L1 -1155 1352 1160 4055 209 55 11 chr2 238465318 238466420 -12221434 - L1MB8 LINE L1 0 6178 4977 770 206 113 0 chr2 238466420 238466580 -12221274 - MER45A DNA AcHobo 0 178 1 4055 209 55 11 chr2 238466580 238467186 -12220668 - L1MB8 LINE L1 -1201 4977 4399 478 278 8 23 chr2 238467859 238467992 -12219862 + MER34 LTR ERV1 1 131 -411 1087 161 31 0 chr2 238468017 238468209 -12219645 + L1M2 LINE L1 5411 5608 -704 31690 99 13 26 chr2 238468221 238472719 -12215135 + L1PA7 LINE L1 1 4465 -2004 2452 71 3 10 chr2 238472719 238473027 -12214827 + AluSp SINE Alu 1 306 -7 31690 99 13 26 chr2 238473027 238475006 -12212848 + L1PA7 LINE L1 4465 6469 0 521 229 93 38 chr2 238475015 238475300 -12212554 + LTR48 LTR ERV1 228 727 -60 552 200 0 70 chr2 238475309 238475424 -12212430 - AluJb SINE Alu -192 120 14 240 35 0 0 chr2 238475431 238475460 -12212394 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1724 155 25 14 chr2 238475463 238475747 -12212107 - AluJb SINE Alu -25 287 1 1880 151 7 10 chr2 238475749 238476047 -12211807 - AluJo SINE Alu -15 297 1 6724 64 5 21 chr2 238476624 238476697 -12211157 + L1P LINE L1 2771 2844 -3302 2892 19 0 0 chr2 238476697 238477011 -12210843 + AluYb8 SINE Alu 1 314 -4 6724 64 5 21 chr2 238477011 238477859 -12209995 + L1P LINE L1 2844 3678 -2468 752 124 0 0 chr2 238478064 238478169 -12209685 + U6 snRNA snRNA 1 105 -2 1118 177 183 57 chr2 238478242 238478592 -12209262 - MSTD LTR MaLR 0 396 3 229 83 83 0 chr2 238479243 238479279 -12208575 + Tigger3(Golem) DNA MER2_type 2990 3028 -1 229 143 0 0 chr2 238479279 238479313 -12208541 + MLT1C LTR MaLR 434 467 0 2240 109 3 16 chr2 238479862 238480175 -12207679 + AluSx SINE Alu 1 309 -3 532 283 35 20 chr2 238480907 238481105 -12206749 + LTR16C LTR ERVL 79 279 -212 285 237 17 0 chr2 238481153 238481212 -12206642 + LTR16C LTR ERVL 432 491 0 1674 137 0 19 chr2 238481690 238481961 -12205893 - AluJb SINE Alu -5 307 42 34 24 0 0 chr2 238482764 238482805 -12205049 + AT_rich Low_complexity Low_complexity 1 41 0 306 0 0 0 chr2 238482921 238482955 -12204899 + (TG)n Simple_repeat Simple_repeat 2 35 0 1885 160 10 10 chr2 238482958 238483270 -12204584 - AluJb SINE Alu 0 312 1 22 0 0 0 chr2 238483281 238483303 -12204551 + AT_rich Low_complexity Low_complexity 1 22 0 2116 100 4 0 chr2 238483512 238483783 -12204071 + AluSx SINE Alu 1 272 -40 1247 119 40 25 chr2 238484353 238484554 -12203300 + AluJo SINE Alu 87 290 -22 334 258 16 31 chr2 238484766 238484894 -12202960 + L2 LINE L2 2590 2715 -599 2351 118 90 24 chr2 238484980 238485402 -12202452 - LTR7 LTR ERV1 0 450 1 400 62 0 78 chr2 238485402 238485466 -12202388 - HERVH LTR ERV1 0 7713 7655 1630 147 11 22 chr2 238485467 238485507 -12202347 + AluSx SINE Alu 27 66 -246 4304 69 4 2 chr2 238485507 238486060 -12201794 + MER41A LTR ERV1 1 554 0 1630 147 11 22 chr2 238486060 238486291 -12201563 + AluSx SINE Alu 66 295 -17 2027 150 74 6 chr2 238486304 238486670 -12201184 + L1M4 LINE L1 5254 5644 -540 1949 119 0 34 chr2 238486706 238487001 -12200853 + AluSg SINE Alu 1 285 -25 717 184 88 40 chr2 238487932 238488182 -12199672 - LTR37B LTR ERV1 -8 460 199 2328 82 0 0 chr2 238488385 238488749 -12199105 - AluSx SINE Alu 0 366 3 1332 187 5 0 chr2 238489078 238489292 -12198562 - MER58A DNA MER1_type -9 215 1 204 316 13 13 chr2 238489523 238489602 -12198252 - L2 LINE L2 -970 2344 2266 1003 73 0 8 chr2 238489614 238489738 -12198116 + AluSp SINE Alu 1 123 -190 1936 159 0 0 chr2 238489910 238490217 -12197637 - AluSx SINE Alu 0 309 3 1644 195 23 0 chr2 238490410 238490712 -12197142 + AluJb SINE Alu 1 309 -3 644 204 11 31 chr2 238490712 238491053 -12196801 + GA-rich Low_complexity Low_complexity 1 334 0 16684 131 14 23 chr2 238491061 238493779 -12194075 + L1P LINE L1 11 2702 -3444 826 117 0 0 chr2 238493879 238493990 -12193864 + AluSg/x SINE Alu 180 290 -20 190 412 59 9 chr2 238494228 238494449 -12193405 - L3 LINE CR1 -1325 252 21 200 295 121 52 chr2 238494509 238494682 -12193172 + MIR SINE MIR 8 192 -70 2401 71 3 34 chr2 238495438 238495761 -12192093 - AluSp SINE Alu 0 313 1 2146 123 7 10 chr2 238495898 238496199 -12191655 - AluSx SINE Alu -12 300 1 405 203 40 123 chr2 238496394 238496621 -12191233 - LTR33 LTR ERVL -289 232 25 234 209 22 88 chr2 238496728 238496819 -12191035 + L1MEd LINE L1 483 567 -5552 22 35 0 0 chr2 238497003 238497032 -12190822 + AT_rich Low_complexity Low_complexity 1 29 0 419 254 87 23 chr2 238497443 238497616 -12190238 - MIR SINE MIR -1 261 78 988 102 0 0 chr2 238497703 238497830 -12190024 + FLAM_C SINE Alu 1 127 -16 531 260 0 20 chr2 238497958 238498104 -12189750 - MER112 DNA MER1_type -101 159 17 251 150 0 67 chr2 238498427 238498487 -12189367 - MER103 DNA DNA -109 57 2 315 582 11 45 chr2 238498712 238498889 -12188965 - AluYb8 SINE Alu -3 305 135 907 127 25 28 chr2 238498908 238499017 -12188837 - L1MA4 LINE L1 -60 6240 6132 2084 112 0 45 chr2 238499017 238499330 -12188524 - AluSx SINE Alu -13 299 1 907 127 25 28 chr2 238499330 238499407 -12188447 - L1MA4 LINE L1 -168 6132 6056 452 302 207 28 chr2 238499410 238500019 -12187835 - L1M4 LINE L1 -765 5381 4664 1728 170 3 24 chr2 238500038 238500177 -12187677 + AluJo SINE Alu 1 141 -177 2247 108 0 7 chr2 238500177 238500474 -12187380 + AluSx SINE Alu 1 295 -17 1728 170 3 24 chr2 238500474 238500658 -12187196 + AluJo SINE Alu 141 318 0 2326 114 0 0 chr2 238500731 238501029 -12186825 + AluSx SINE Alu 1 298 -14 236 275 14 0 chr2 238501827 238501896 -12185958 - L2 LINE L2 -509 2805 2736 27 0 0 0 chr2 238501917 238501944 -12185910 + AT_rich Low_complexity Low_complexity 1 27 0 2078 138 0 0 chr2 238501944 238502233 -12185621 - AluSx SINE Alu -23 289 1 6097 131 20 36 chr2 238502233 238502591 -12185263 - L1MC1 LINE L1 -5 6328 5966 2247 117 3 0 chr2 238502591 238502898 -12184956 - AluSx SINE Alu -4 308 1 6097 131 20 36 chr2 238502898 238503563 -12184291 - L1MC1 LINE L1 -367 5966 5321 1698 179 10 3 chr2 238503663 238503953 -12183901 - MER7C DNA MER2_type -310 292 1 1648 182 66 75 chr2 238503953 238504109 -12183745 - MLT1C LTR MaLR -32 435 279 2297 104 0 7 chr2 238504109 238504416 -12183438 - AluSx SINE Alu -7 305 1 1648 182 66 75 chr2 238504416 238504698 -12183156 - MLT1C LTR MaLR -188 279 1 1608 197 3 13 chr2 238504729 238504863 -12182991 + AluJo SINE Alu 1 135 -177 2046 112 3 24 chr2 238504863 238505158 -12182696 + AluSg SINE Alu 15 303 -7 1608 197 3 13 chr2 238505158 238505322 -12182532 + AluJo SINE Alu 135 296 -16 2276 98 3 0 chr2 238505378 238505695 -12182159 + AluSp SINE Alu 1 318 0 1848 170 0 29 chr2 238505756 238506062 -12181792 - AluJo SINE Alu -15 297 1 1047 126 0 74 chr2 238506191 238506366 -12181488 + AluSg/x SINE Alu 137 298 -14 236 267 93 0 chr2 238506379 238506465 -12181389 + MARNA DNA Mariner 443 536 -50 237 65 0 0 chr2 238506604 238506635 -12181219 + (TCCCC)n Simple_repeat Simple_repeat 2 32 0 1138 165 169 31 chr2 238506640 238506752 -12181102 - AluJo SINE Alu -13 289 194 207 0 0 0 chr2 238506752 238506775 -12181079 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2096 112 18 0 chr2 238506776 238507054 -12180800 - AluSq SINE Alu -30 283 1 1138 165 169 31 chr2 238507054 238507193 -12180661 - AluJo SINE Alu -107 195 1 181 196 36 0 chr2 238507202 238507258 -12180596 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 812 196 77 29 chr2 238507345 238507554 -12180300 + MER20 DNA MER1_type 1 219 0 27 29 0 0 chr2 238507974 238508008 -12179846 + AT_rich Low_complexity Low_complexity 1 34 0 2219 113 3 0 chr2 238508108 238508401 -12179453 - AluSp SINE Alu -15 298 5 367 264 216 30 chr2 238508444 238508713 -12179141 - L1MC/D LINE L1 -2050 5758 5440 11050 64 5 0 chr2 238508815 238511014 -12176840 + L1PA6 LINE L1 3943 6154 0 512 119 0 37 chr2 238511015 238511124 -12176730 + (GGGAA)n Simple_repeat Simple_repeat 5 109 0 193 271 0 0 chr2 238511758 238511806 -12176048 - L2 LINE L2 -5 3267 3220 864 231 19 0 chr2 238511819 238511975 -12175879 - MER63A DNA MER1_type -25 185 27 218 313 110 6 chr2 238511990 238512089 -12175765 - L2 LINE L2 -41 3272 3185 243 0 0 0 chr2 238512089 238512116 -12175738 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 218 313 110 6 chr2 238512116 238512179 -12175675 - L2 LINE L2 -128 3185 3093 1879 136 0 39 chr2 238512220 238512499 -12175355 + AluJo SINE Alu 3 270 -42 603 0 0 0 chr2 238512499 238512566 -12175288 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 2058 121 0 11 chr2 238512568 238512870 -12174984 + AluSx SINE Alu 5 303 0 1390 263 118 17 chr2 238512964 238513003 -12174851 + L2 LINE L2 1672 1706 -1608 2408 69 0 3 chr2 238513003 238513293 -12174561 + AluSc SINE Alu 1 289 -20 1390 263 118 17 chr2 238513293 238513839 -12174015 + L2 LINE L2 1706 2316 -998 224 259 17 0 chr2 238513839 238513897 -12173957 + L2 LINE L2 2685 2743 -571 1279 212 18 44 chr2 238513897 238513964 -12173890 + L1M4 LINE L1 4871 4938 -1208 1942 140 43 35 chr2 238513964 238514336 -12173518 + THE1C LTR MaLR 1 375 0 1279 212 18 44 chr2 238514336 238514445 -12173409 + L1M4 LINE L1 4938 5048 -1098 2640 139 26 19 chr2 238514445 238514868 -12172986 + MSTC LTR MaLR 3 428 0 1279 212 18 44 chr2 238514868 238515101 -12172753 + L1M4 LINE L1 5048 5272 -874 420 278 0 0 chr2 238515132 238515222 -12172632 - L1MC4 LINE L1 -1339 6703 6614 370 284 23 0 chr2 238515146 238515234 -12172620 + L1MC4 LINE L1 6614 6703 -1339 * 350 247 0 13 chr2 238515211 238515288 -12172566 - L1MCa LINE L1 -4356 2070 1995 * 359 326 0 0 chr2 238515266 238515355 -12172499 + L1MC4 LINE L1 6614 6702 -1340 * 384 300 0 0 chr2 238515280 238515370 -12172484 - L1MC4 LINE L1 -1339 6703 6614 2183 108 0 7 chr2 238515379 238515666 -12172188 - AluSq SINE Alu -17 296 12 2214 114 30 0 chr2 238515839 238516138 -12171716 + AluSg SINE Alu 1 308 -2 594 164 52 22 chr2 238516527 238516683 -12171171 - L1PB1 LINE L1 -3 6148 5988 244 58 0 77 chr2 238516683 238516735 -12171119 + (TTC)n Simple_repeat Simple_repeat 1 48 0 573 216 11 22 chr2 238516737 238516918 -12170936 + CT-rich Low_complexity Low_complexity 1 179 0 2112 117 0 0 chr2 238516918 238517192 -12170662 - AluSx SINE Alu -38 274 1 1650 104 41 75 chr2 238517193 238517278 -12170576 - L1PB1 LINE L1 -120 6031 5947 2746 139 37 15 chr2 238517278 238518065 -12169789 - L1MA4A LINE L1 -366 5937 5098 1318 179 147 23 chr2 238518517 238518824 -12169030 - MER7A DNA MER2_type -3 343 1 2297 82 0 0 chr2 238519031 238519360 -12168494 - AluSg SINE Alu 0 329 1 1508 186 54 27 chr2 238519470 238519766 -12168088 - AluJo SINE Alu -8 304 1 2068 120 23 20 chr2 238520386 238520687 -12167167 + AluSx SINE Alu 1 302 -10 228 364 57 36 chr2 238521475 238521615 -12166239 + L3 LINE CR1 1430 1572 -5 236 230 112 41 chr2 238521685 238521812 -12166042 + MIR SINE MIR 15 151 -66 442 224 30 15 chr2 238522699 238522833 -12165021 - L1MA9 LINE L1 -92 6220 6085 185 83 28 0 chr2 238522833 238522869 -12164985 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1976 76 0 0 chr2 238522898 238523136 -12164718 - AluY SINE Alu -73 238 1 2338 115 0 0 chr2 238523206 238523510 -12164344 - AluSx SINE Alu -8 304 1 650 228 23 23 chr2 238523651 238523822 -12164032 - MER104 DNA Tc2 -3 177 7 306 283 66 19 chr2 238523827 238523933 -12163921 - MIR SINE MIR -121 141 31 281 331 37 29 chr2 238524496 238524632 -12163222 - L2 LINE L2 0 3272 3136 701 198 8 0 chr2 238524736 238524857 -12162997 + FLAM_A SINE Alu 1 122 -20 378 0 0 0 chr2 238524857 238524899 -12162955 + (CTAA)n Simple_repeat Simple_repeat 2 43 0 328 379 6 0 chr2 238525264 238525438 -12162416 - L2 LINE L2 -216 3056 2882 295 181 97 14 chr2 238526681 238526753 -12161101 + MLT1J LTR MaLR 232 309 -202 2198 122 0 19 chr2 238527091 238527410 -12160444 - AluSq SINE Alu 0 313 1 189 0 0 0 chr2 238527621 238527642 -12160212 + (CCCA)n Simple_repeat Simple_repeat 3 23 0 691 308 82 40 chr2 238527692 238528325 -12159529 + L2 LINE L2 1595 2254 -1060 516 278 73 66 chr2 238528565 238528838 -12159016 + L2 LINE L2 2956 3230 -42 306 262 29 10 chr2 238528855 238528958 -12158896 + MLT1L LTR MaLR 511 615 0 204 261 46 0 chr2 238528998 238529063 -12158791 - L3 LINE CR1 -312 1265 1198 528 299 16 11 chr2 238529243 238529430 -12158424 + MER5A DNA MER1_type 1 188 -1 337 233 12 23 chr2 238529659 238529745 -12158109 + L2 LINE L2 3224 3308 -5 306 200 129 0 chr2 238529749 238529819 -12158035 + L2 LINE L2 3231 3309 -4 2420 94 0 3 chr2 238529972 238530280 -12157574 + AluSx SINE Alu 1 307 -5 987 205 0 0 chr2 238530654 238530825 -12157029 + AluJb SINE Alu 139 309 -3 585 285 34 34 chr2 238530948 238531183 -12156671 + MLT1E LTR MaLR 1 235 -358 387 247 64 82 chr2 238531527 238531577 -12156277 + L1ME4a LINE L1 5777 5826 -295 2240 104 0 3 chr2 238531577 238531874 -12155980 + AluSx SINE Alu 1 296 -16 387 247 64 82 chr2 238531874 238532100 -12155754 + L1ME4a LINE L1 5826 6049 -72 3287 143 5 13 chr2 238532725 238532830 -12155024 - L1MB3 LINE L1 0 6183 6079 1944 104 125 32 chr2 238532830 238533030 -12154824 - MER51B LTR ERV1 0 377 197 2507 53 0 7 chr2 238533030 238533329 -12154525 + AluY SINE Alu 1 297 -14 1944 104 125 32 chr2 238533329 238533473 -12154381 - MER51B LTR ERV1 -180 197 1 3287 143 5 13 chr2 238533473 238533921 -12153933 - L1MB3 LINE L1 -104 6079 5634 1771 136 71 42 chr2 238534380 238534734 -12153120 + LTR10A LTR ERV1 185 548 -61 2159 112 26 3 chr2 238535017 238535321 -12152533 - AluSq SINE Alu -2 311 1 2103 119 65 0 chr2 238536005 238536341 -12151513 - MER51B LTR ERV1 -19 358 1 4206 70 26 9 chr2 238536433 238536863 -12150991 + MER41A LTR ERV1 1 443 -111 2166 138 0 3 chr2 238536863 238537174 -12150680 - AluSx SINE Alu -2 310 1 4206 70 26 9 chr2 238537174 238537288 -12150566 + MER41A LTR ERV1 443 554 0 219 261 0 0 chr2 238537679 238537725 -12150129 - L2 LINE L2 -23 3290 3245 1871 85 0 4 chr2 238537959 238538194 -12149660 + AluSq SINE Alu 1 234 -79 192 77 0 0 chr2 238538201 238538227 -12149627 + (A)n Simple_repeat Simple_repeat 1 26 0 2111 141 3 3 chr2 238539763 238540075 -12147779 + AluSx SINE Alu 1 312 0 2291 95 0 7 chr2 238541451 238541745 -12146109 - AluSc SINE Alu -17 292 1 637 94 0 0 chr2 238542572 238542657 -12145197 + Alu SINE Alu 220 304 -8 699 236 6 6 chr2 238542698 238542855 -12144999 + MIR SINE MIR 102 258 -4 273 271 149 9 chr2 238543343 238543450 -12144404 + MIR SINE MIR 109 230 -32 2141 135 19 11 chr2 238543456 238543668 -12144186 - MLT1B LTR MaLR -1 389 171 2325 102 3 3 chr2 238543668 238543971 -12143883 - AluSc SINE Alu -6 303 1 2141 135 19 11 chr2 238543971 238544128 -12143726 - MLT1B LTR MaLR -219 171 17 433 269 36 92 chr2 238544311 238544581 -12143273 - MLT1J LTR MaLR -81 430 196 2250 125 0 3 chr2 238544581 238544892 -12142962 + AluSq SINE Alu 1 310 -3 433 269 36 92 chr2 238544892 238545066 -12142788 - MLT1J LTR MaLR -315 196 14 240 235 250 5 chr2 238545743 238545943 -12141911 + L2 LINE L2 2442 2690 -624 394 270 75 31 chr2 238546032 238546258 -12141596 + L2 LINE L2 2913 3148 -165 195 129 0 0 chr2 238546345 238546376 -12141478 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 2300 101 3 13 chr2 238546504 238546812 -12141042 + AluSx SINE Alu 1 305 -7 378 200 44 22 chr2 238547005 238547095 -12140759 + MIR SINE MIR 63 154 -108 2241 108 0 7 chr2 238547098 238547395 -12140459 - AluSx SINE Alu -17 295 1 2345 193 33 7 chr2 238547959 238548414 -12139440 - MLT1C LTR MaLR 0 467 1 262 236 28 0 chr2 238548490 238548562 -12139292 + MER81 DNA DNA 38 111 -3 405 180 50 10 chr2 238548576 238548676 -12139178 - Charlie8 DNA MER1_type -2250 167 64 367 238 12 0 chr2 238550024 238550104 -12137750 + L2 LINE L2 3192 3272 0 444 274 142 5 chr2 238550768 238550987 -12136867 - L1MC4 LINE L1 -1 8041 7793 23 0 0 0 chr2 238551033 238551056 -12136798 + AT_rich Low_complexity Low_complexity 1 23 0 2135 112 4 0 chr2 238551186 238551558 -12136296 + AluSq SINE Alu 5 377 0 1383 152 146 52 chr2 238551819 238552162 -12135692 + THE1C LTR MaLR 1 375 0 540 273 73 6 chr2 238552514 238552679 -12135175 - MIR SINE MIR -32 230 55 369 156 0 0 chr2 238552934 238552998 -12134856 - AluYb8 SINE Alu -7 301 238 2490 55 3 16 chr2 238552998 238553309 -12134545 + AluY SINE Alu 1 307 -4 1635 158 0 0 chr2 238553314 238553560 -12134294 - AluJb SINE Alu -66 246 1 224 75 0 25 chr2 238554293 238554333 -12133521 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 2052 94 61 0 chr2 238554395 238554672 -12133182 + AluSp SINE Alu 1 294 -19 1828 187 68 32 chr2 238554767 238555210 -12132644 + LTR2B LTR ERV1 32 490 0 561 222 58 115 chr2 238556877 238557120 -12130734 - L2 LINE L2 0 3313 3085 2216 114 30 0 chr2 238557685 238557983 -12129871 - AluSx SINE Alu -5 307 1 193 161 0 36 chr2 238558332 238558388 -12129466 + GA-rich Low_complexity Low_complexity 2 55 0 1782 134 11 0 chr2 238558495 238558764 -12129090 - AluSq SINE Alu 0 313 42 1776 151 39 56 chr2 238558933 238559121 -12128733 - AluJb SINE Alu -12 300 117 2655 56 0 0 chr2 238559121 238559427 -12128427 + AluY SINE Alu 1 306 -5 1776 151 39 56 chr2 238559427 238559543 -12128311 - AluJb SINE Alu -195 117 1 789 172 46 17 chr2 238559618 238559792 -12128062 - L1MB8 LINE L1 -6 6172 5994 673 320 248 29 chr2 238560220 238561340 -12126514 + L3 LINE CR1 211 1576 -1 3725 267 159 31 chr2 238561437 238563191 -12124663 - L1MEc LINE L1 -4278 2118 115 1667 136 36 63 chr2 238563191 238563493 -12124361 + AluJb SINE Alu 1 294 -18 3725 267 159 31 chr2 238563493 238563587 -12124267 - L1MEc LINE L1 -6281 115 34 604 263 104 48 chr2 238564725 238564995 -12122859 + MER102a DNA MER1_type 32 316 -14 215 269 0 0 chr2 238568545 238568597 -12119257 + L2 LINE L2 3262 3313 0 261 300 25 8 chr2 238568600 238568720 -12119134 - MIR SINE MIR -114 148 27 31 0 0 0 chr2 238569992 238570023 -12117831 + AT_rich Low_complexity Low_complexity 1 31 0 2224 100 0 10 chr2 238570072 238570383 -12117471 + AluSg SINE Alu 1 308 -2 383 258 21 0 chr2 238571731 238571824 -12116030 - MIR3 SINE MIR -27 181 87 200 263 121 50 chr2 238572348 238572447 -12115407 + MIR3 SINE MIR 13 118 -90 405 295 33 0 chr2 238573248 238573370 -12114484 + MIR SINE MIR 56 181 -81 1455 174 6 84 chr2 238574056 238574190 -12113664 + AluJb SINE Alu 1 144 -168 2067 106 23 0 chr2 238574190 238574493 -12113361 + AluSp SINE Alu 1 310 -3 1455 174 6 84 chr2 238574493 238574680 -12113174 + AluJb SINE Alu 144 297 -15 390 274 20 55 chr2 238574947 238575093 -12112761 - L3 LINE CR1 -67 1510 1370 22 35 0 0 chr2 238576555 238576584 -12111270 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr2 238576891 238576915 -12110939 + AT_rich Low_complexity Low_complexity 1 24 0 198 0 0 0 chr2 238576952 238576974 -12110880 + (CA)n Simple_repeat Simple_repeat 1 22 0 228 329 52 33 chr2 238576974 238577187 -12110667 - L1ME4a LINE L1 -50 6071 5855 328 298 101 12 chr2 238577331 238577499 -12110355 - L1ME4a LINE L1 -406 5715 5533 333 340 21 0 chr2 238578373 238578564 -12109290 - L1ME4a LINE L1 -2239 3907 3713 930 347 75 48 chr2 238578704 238579381 -12108473 - L1ME4a LINE L1 -2623 3523 2797 1410 160 38 62 chr2 238579381 238579669 -12108185 - AluJb SINE Alu -31 281 1 930 347 75 48 chr2 238579669 238580229 -12107625 - L1ME4a LINE L1 -3349 2797 2253 1615 152 10 17 chr2 238580655 238580951 -12106903 - AluJo SINE Alu -14 298 5 836 123 0 0 chr2 238580970 238581092 -12106762 - AluJb SINE Alu -179 133 12 1150 276 26 6 chr2 238582049 238582389 -12105465 + LTR16B LTR ERVL 109 455 -9 387 282 153 0 chr2 238583994 238584157 -12103697 + L1MC4a LINE L1 5706 5893 -1915 2033 113 0 31 chr2 238584458 238584777 -12103077 + AluSx SINE Alu 4 312 0 400 269 54 85 chr2 238585467 238585690 -12102164 - MLT1K LTR MaLR -201 387 172 399 230 80 80 chr2 238585745 238585932 -12101922 + MLT1K LTR MaLR 396 582 -6 338 204 23 23 chr2 238586014 238586102 -12101752 + L1ME4a LINE L1 5971 6058 -63 234 150 0 0 chr2 238588657 238588697 -12099157 + (GGA)n Simple_repeat Simple_repeat 1 40 0 243 0 0 0 chr2 238588946 238588973 -12098881 + (CAGAC)n Simple_repeat Simple_repeat 3 29 0 621 170 55 12 chr2 238590712 238590877 -12096977 + AluY SINE Alu 104 275 -36 767 236 123 100 chr2 238591266 238591778 -12096076 - L1MC4a LINE L1 -728 7233 6730 292 191 16 16 chr2 238592878 238592895 -12094959 + MER3 DNA MER1_type 30 46 -163 771 184 167 6 chr2 238592895 238593069 -12094785 - MER3 DNA MER1_type 0 209 8 2224 81 3 3 chr2 238595317 238595613 -12092241 + AluSp SINE Alu 2 297 -16 2026 113 14 3 chr2 238597197 238597488 -12090366 + AluSx SINE Alu 1 294 -18 180 225 150 100 chr2 238597672 238597717 -12090137 + L3 LINE CR1 246 287 -1290 19820 55 0 4 chr2 238597717 238601018 -12086836 + L1PA6 LINE L1 2835 6152 -2 180 225 150 100 chr2 238601018 238601132 -12086722 + L3 LINE CR1 287 413 -1164 683 342 113 14 chr2 238601344 238601698 -12086156 + L3 LINE CR1 484 872 -705 413 271 113 8 chr2 238601778 238601911 -12085943 - MIR SINE MIR -88 174 28 873 305 83 34 chr2 238601992 238602428 -12085426 + L3 LINE CR1 1006 1462 -115 204 137 59 59 chr2 238603606 238603657 -12084197 - L2 LINE L2 0 3272 3222 1777 102 23 11 chr2 238603659 238603945 -12083909 - AluSq SINE Alu 0 333 45 304 233 142 33 chr2 238603945 238604065 -12083789 - L2 LINE L2 -44 3269 3137 480 278 35 21 chr2 238604473 238604617 -12083237 - L2 LINE L2 0 3313 3168 314 246 164 0 chr2 238605117 238605227 -12082627 + L2 LINE L2 3184 3311 -2 495 226 32 65 chr2 238606290 238606476 -12081378 + MIR3 SINE MIR 8 187 -21 612 272 35 67 chr2 238607125 238607379 -12080475 + MIR SINE MIR 11 256 -6 492 193 52 146 chr2 238608369 238608561 -12079293 - MER58A DNA MER1_type -24 200 27 306 0 0 0 chr2 238609586 238609620 -12078234 + (T)n Simple_repeat Simple_repeat 1 34 0 1190 198 32 0 chr2 238610198 238610415 -12077439 + MER58A DNA MER1_type 1 224 0 1857 132 20 10 chr2 238611599 238611895 -12075959 + AluSx SINE Alu 1 299 -13 644 250 65 30 chr2 238612325 238612525 -12075329 - MIR SINE MIR -49 213 7 25 31 0 0 chr2 238615974 238616006 -12071848 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr2 238616647 238616671 -12071183 + AT_rich Low_complexity Low_complexity 1 24 0 2351 64 51 3 chr2 238618191 238618486 -12069368 - AluY SINE Alu -2 309 1 741 245 93 0 chr2 238619360 238619597 -12068257 + LTR16C LTR ERVL 233 491 0 2495 74 0 3 chr2 238620478 238620787 -12067067 + AluSp SINE Alu 1 308 -5 2407 162 84 68 chr2 238620872 238621312 -12066542 - L1MC3 LINE L1 -8 7777 7323 2127 138 20 0 chr2 238621312 238621616 -12066238 - AluJb SINE Alu -2 310 1 2407 162 84 68 chr2 238621616 238621768 -12066086 - L1MC3 LINE L1 -462 7323 7175 231 309 0 0 chr2 238621773 238621841 -12066013 - MLT1F1 LTR MaLR -465 102 35 2287 81 87 9 chr2 238622099 238622433 -12065421 + THE1B LTR MaLR 5 364 0 208 283 163 0 chr2 238622549 238622641 -12065213 + L2 LINE L2 2426 2532 -782 272 284 183 24 chr2 238622909 238623078 -12064776 - MIR SINE MIR -2 260 65 228 292 0 0 chr2 238623100 238623148 -12064706 + polypyrimidine Low_complexity Low_complexity 2 49 0 1101 78 49 0 chr2 238623148 238623290 -12064564 - AluSp/q SINE Alu -8 305 157 1292 219 71 23 chr2 238625429 238625780 -12062074 - MLT1A2 LTR MaLR -4 370 3 1981 167 3 3 chr2 238626283 238626594 -12061260 - AluJo SINE Alu 0 312 2 1641 242 75 15 chr2 238626598 238627077 -12060777 - Charlie4a DNA MER1_type 0 508 1 2166 136 0 3 chr2 238627980 238628290 -12059564 - AluSx SINE Alu -3 309 1 294 301 0 0 chr2 238630550 238630633 -12057221 + LTR67 LTR ERVL 461 543 -14 254 153 0 85 chr2 238631376 238631435 -12056419 + L1MB7 LINE L1 6066 6119 -65 530 241 64 21 chr2 238631926 238632067 -12055787 + MER58B DNA MER1_type 179 325 -16 404 253 50 0 chr2 238632084 238632183 -12055671 + L2 LINE L2 3150 3253 -19 1569 173 87 0 chr2 238632270 238632384 -12055470 + AluJb SINE Alu 1 104 -208 210 37 0 0 chr2 238632384 238632411 -12055443 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1569 173 87 0 chr2 238632411 238632573 -12055281 + AluJb SINE Alu 104 301 -11 375 276 82 0 chr2 238632621 238632719 -12055135 + MER81 DNA DNA 2 107 -7 288 258 45 11 chr2 238633120 238633209 -12054645 - MLT1K LTR MaLR -360 228 137 2165 93 4 4 chr2 238634625 238634941 -12052913 - AluSg1 SINE Alu 0 316 1 226 326 45 0 chr2 238635080 238635169 -12052685 + L2 LINE L2 3141 3233 -39 321 220 101 9 chr2 238635297 238635406 -12052448 + L2 LINE L2 3152 3270 -2 237 65 0 0 chr2 238636527 238636558 -12051296 + (CTGGGG)n Simple_repeat Simple_repeat 2 32 0 426 240 30 0 chr2 238637148 238637248 -12050606 - MIR SINE MIR -68 194 92 889 285 109 21 chr2 238637255 238637705 -12050149 + MLT1G1 LTR MaLR 1 494 -55 2360 100 0 3 chr2 238637705 238638006 -12049848 - AluSg SINE Alu -10 300 1 889 285 109 21 chr2 238638006 238638067 -12049787 + MLT1G1 LTR MaLR 494 548 -1 232 256 51 26 chr2 238638069 238638147 -12049707 - MIR SINE MIR -174 88 9 1586 164 51 27 chr2 238638726 238639019 -12048835 - AluJb SINE Alu -7 305 6 1785 150 78 22 chr2 238639485 238639844 -12048010 + MSTB1 LTR MaLR 54 432 0 297 228 43 11 chr2 238640306 238640398 -12047456 - LTR67 LTR ERVL -24 533 439 280 304 47 40 chr2 238640494 238640573 -12047281 - LTR67 LTR ERVL -295 262 180 1264 165 95 48 chr2 238640573 238640931 -12046923 + THE1C LTR MaLR 1 375 0 280 304 47 40 chr2 238640931 238640999 -12046855 - LTR67 LTR ERVL -377 180 114 6506 125 41 49 chr2 238641009 238641641 -12046213 - Tigger3b DNA MER2_type -1809 1219 600 2184 92 3 3 chr2 238641641 238641923 -12045931 - AluSx SINE Alu -7 305 24 6506 125 41 49 chr2 238641923 238642519 -12045335 - Tigger3b DNA MER2_type -2428 600 1 192 156 16 31 chr2 238642942 238643006 -12044848 + C-rich Low_complexity Low_complexity 1 63 0 341 286 0 0 chr2 238643546 238643623 -12044231 - MIR3 SINE MIR -21 187 111 360 301 138 21 chr2 238644416 238644655 -12043199 - L1MC4a LINE L1 -1903 5905 5639 362 233 11 33 chr2 238644709 238644799 -12043055 + L1 LINE L1 3695 3782 -2364 1131 289 121 55 chr2 238644810 238645175 -12042679 + L1ME2 LINE L1 3841 4180 -1984 2385 112 0 0 chr2 238645175 238645480 -12042374 + AluSx SINE Alu 1 305 -7 1131 289 121 55 chr2 238645480 238645807 -12042047 + L1ME2 LINE L1 4180 4484 -1680 2338 97 17 0 chr2 238645807 238646107 -12041747 + AluY SINE Alu 1 305 -6 1131 289 121 55 chr2 238646107 238647389 -12040465 + L1ME2 LINE L1 4484 5949 -215 652 307 120 28 chr2 238647690 238648081 -12039773 + MLT1H LTR MaLR 107 533 -16 2374 99 0 0 chr2 238648237 238648531 -12039323 + AluSp SINE Alu 1 294 -19 2152 101 4 0 chr2 238648588 238648895 -12038959 + AluSx SINE Alu 7 314 0 355 353 104 29 chr2 238648919 238649318 -12038536 - L1MC4a LINE L1 -804 5342 4880 2359 98 0 19 chr2 238649318 238649636 -12038218 + AluSx SINE Alu 1 312 0 355 353 104 29 chr2 238649636 238649794 -12038060 - L1MC4a LINE L1 -1266 4880 4735 324 23 0 0 chr2 238649801 238649844 -12038010 + AluSp/q SINE Alu 253 295 -8 290 22 22 22 chr2 238649894 238649939 -12037915 + AluY SINE Alu 1 45 -255 483 244 163 20 chr2 238652104 238652336 -12035518 + MIR SINE MIR 4 262 0 2446 59 10 0 chr2 238653208 238653497 -12034357 + AluY SINE Alu 1 292 -19 300 209 163 0 chr2 238654653 238654739 -12033115 + MIR3 SINE MIR 108 207 -1 191 250 33 0 chr2 238657018 238657078 -12030776 - L2 LINE L2 -538 2776 2715 410 230 183 19 chr2 238657792 238657950 -12029904 + MIR3 SINE MIR 21 198 -10 2039 113 0 0 chr2 238659228 238659493 -12028361 - AluSq SINE Alu -48 265 1 253 203 25 25 chr2 238659514 238659593 -12028261 + L1M4 LINE L1 3648 3726 -2420 250 333 101 0 chr2 238660826 238660964 -12026890 - L2 LINE L2 -1 3312 3161 272 345 36 77 chr2 238661111 238661499 -12026355 - L2 LINE L2 -452 2862 2491 1608 95 0 114 chr2 238661507 238661770 -12026084 + AluSg/x SINE Alu 66 298 -14 2352 113 3 0 chr2 238661793 238662103 -12025751 + AluSq SINE Alu 2 312 -1 2292 112 3 0 chr2 238662106 238662411 -12025443 + AluSc SINE Alu 1 306 -3 10542 139 81 28 chr2 238662411 238663346 -12024508 + L1M1 LINE L1 44 928 -6637 2232 134 0 0 chr2 238663346 238663653 -12024201 + AluJb SINE Alu 1 307 -5 10542 139 81 28 chr2 238663653 238664367 -12023487 + L1M1 LINE L1 928 1603 -5962 2282 107 0 40 chr2 238664367 238664693 -12023161 + AluSp SINE Alu 1 313 0 10542 139 81 28 chr2 238664693 238665082 -12022772 + L1M1 LINE L1 1603 2854 -4711 2107 140 23 0 chr2 238665082 238665382 -12022472 + AluSx SINE Alu 1 307 -5 1220 210 0 11 chr2 238665382 238665663 -12022191 + L1M1 LINE L1 4187 4464 -3101 1942 184 48 48 chr2 238665821 238666326 -12021528 + MLT1D LTR MaLR 1 505 0 1599 112 27 0 chr2 238666438 238666662 -12021192 - AluSg/x SINE Alu -2 310 81 23 0 0 0 chr2 238666737 238666760 -12021094 + AT_rich Low_complexity Low_complexity 1 23 0 1939 160 0 19 chr2 238667259 238667577 -12020277 - AluJb SINE Alu 0 312 1 765 125 0 0 chr2 238667630 238667750 -12020104 + (TTCC)n Simple_repeat Simple_repeat 1 120 0 1957 137 29 0 chr2 238667750 238668027 -12019827 - AluSx SINE Alu -27 285 1 198 0 0 0 chr2 238668468 238668490 -12019364 + (TTTTA)n Simple_repeat Simple_repeat 5 26 0 2212 112 0 0 chr2 238668497 238668784 -12019070 - AluSg SINE Alu -23 287 1 3546 222 50 67 chr2 238668784 238669913 -12017941 + MER31-int LTR ERV1 3172 4281 -655 422 205 174 43 chr2 238669917 238670078 -12017776 + LTR37A LTR ERV1 46 227 -199 406 256 0 41 chr2 238670136 238670257 -12017597 + MER31-int LTR ERV1 4359 4474 -462 1496 124 0 0 chr2 238670666 238670876 -12016978 - AluSg/x SINE Alu -5 307 98 1183 68 12 12 chr2 238670905 238671067 -12016787 + L1PA6 LINE L1 5993 6154 0 2160 104 0 36 chr2 238671280 238671589 -12016265 - AluSx SINE Alu -13 299 2 354 224 62 99 chr2 238671596 238671757 -12016097 + MER92C LTR ERV1 11 165 -389 2323 90 0 27 chr2 238671777 238672078 -12015776 - AluSx SINE Alu -19 293 1 342 203 0 0 chr2 238672158 238672222 -12015632 + MER92C LTR ERV1 491 554 0 2164 120 3 0 chr2 238672700 238673030 -12014824 + AluSq SINE Alu 1 331 0 1539 126 5 0 chr2 238673597 238673811 -12014043 + AluSx SINE Alu 1 215 -97 741 163 0 41 chr2 238673914 238674037 -12013817 - AluSq/x SINE Alu -194 119 2 2221 138 0 0 chr2 238676736 238677048 -12010806 + AluSx SINE Alu 1 312 0 2276 105 7 0 chr2 238677091 238677395 -12010459 + AluSx SINE Alu 1 306 -6 26 0 0 0 chr2 238677412 238677438 -12010416 + AT_rich Low_complexity Low_complexity 1 26 0 1002 54 78 0 chr2 238677618 238677747 -12010107 + MER85 DNA T2_type 1 139 0 321 108 27 14 chr2 238678890 238678964 -12008890 + CT-rich Low_complexity Low_complexity 2 76 0 1495 168 95 11 chr2 238679100 238679385 -12008469 - AluSx SINE Alu 0 307 1 1393 95 5 0 chr2 238679389 238679589 -12008265 - L1PA13 LINE L1 0 6163 5963 1697 270 240 38 chr2 238679719 238680660 -12007194 + L2 LINE L2 800 1550 -1764 2395 70 3 0 chr2 238680660 238680946 -12006908 - AluSp SINE Alu -26 287 1 1540 92 5 0 chr2 238680946 238681141 -12006713 - AluSp SINE Alu -4 309 113 1697 270 240 38 chr2 238681141 238681166 -12006688 + L2 LINE L2 1550 1569 -1745 1906 167 3 0 chr2 238681166 238681477 -12006377 - AluSx SINE Alu 0 312 1 1697 270 240 38 chr2 238681477 238681685 -12006169 + L2 LINE L2 1569 1734 -1580 2391 88 3 0 chr2 238681685 238681991 -12005863 - AluSx SINE Alu -3 309 3 1697 270 240 38 chr2 238681991 238682195 -12005659 + L2 LINE L2 1734 1895 -1419 1860 140 17 7 chr2 238682195 238682487 -12005367 - AluJb SINE Alu -7 305 11 180 0 0 0 chr2 238682489 238682509 -12005345 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1873 102 14 56 chr2 238682509 238682794 -12005060 - AluSq SINE Alu -30 283 11 1697 270 240 38 chr2 238682794 238682860 -12004994 + L2 LINE L2 1895 1946 -1368 2113 79 96 0 chr2 238682860 238683140 -12004714 - AluSx SINE Alu -5 307 1 1697 270 240 38 chr2 238683140 238683354 -12004500 + L2 LINE L2 1946 2804 -510 207 192 39 0 chr2 238683394 238683446 -12004408 + L2 LINE L2 2907 2960 -353 2395 68 6 13 chr2 238683587 238683898 -12003956 - AluSg SINE Alu -1 309 1 309 251 106 67 chr2 238684077 238684256 -12003598 - MIR SINE MIR -30 232 47 22 94 0 0 chr2 238684852 238684916 -12002938 + GC_rich Low_complexity Low_complexity 1 64 0 200 219 31 0 chr2 238685356 238685420 -12002434 + (CGGGG)n Simple_repeat Simple_repeat 2 67 0 22 0 0 0 chr2 238686557 238686579 -12001275 + AT_rich Low_complexity Low_complexity 1 22 0 389 232 65 39 chr2 238686777 238686932 -12000922 - L1ME4a LINE L1 -4 6117 5959 1857 147 20 0 chr2 238687540 238687833 -12000021 - AluJb SINE Alu -7 305 7 30 27 0 0 chr2 238688390 238688427 -11999427 + AT_rich Low_complexity Low_complexity 1 37 0 643 152 9 0 chr2 238688427 238688532 -11999322 - FLAM_C SINE Alu -26 117 12 1626 164 22 41 chr2 238688562 238688880 -11998974 + AluJo SINE Alu 1 312 0 271 196 0 0 chr2 238689301 238689347 -11998507 - MER31A LTR ERV1 -87 398 353 377 260 144 11 chr2 238690316 238690497 -11997357 + MIR SINE MIR 7 211 -51 203 348 11 22 chr2 238691102 238691194 -11996660 - MIR SINE MIR -97 111 21 318 310 26 35 chr2 238691473 238691586 -11996268 + MIR SINE MIR 22 133 -75 589 237 102 92 chr2 238691938 238692186 -11995668 - L1ME4a LINE L1 -49 6072 5828 1974 124 48 10 chr2 238692186 238692476 -11995378 - AluSx SINE Alu -11 301 1 589 237 102 92 chr2 238692476 238692768 -11995086 - L1ME4a LINE L1 -293 5828 5527 1127 165 59 3 chr2 238693481 238693736 -11994118 - MER7A DNA MER2_type -2 344 2 27 49 0 0 chr2 238693855 238693896 -11993958 + AT_rich Low_complexity Low_complexity 1 41 0 204 291 0 0 chr2 238694769 238694824 -11993030 - MIR3 SINE MIR -23 185 131 2551 179 72 17 chr2 238695018 238695567 -11992287 - L1MC4 LINE L1 -19 8023 7210 1761 181 7 0 chr2 238695568 238695861 -11991993 + AluJb SINE Alu 1 295 -17 225 238 48 16 chr2 238695870 238695933 -11991921 - MER5B DNA MER1_type -106 72 8 2044 140 0 3 chr2 238696626 238696933 -11990921 - AluSx SINE Alu -6 306 1 2163 62 28 68 chr2 238697574 238697898 -11989956 - AluY SINE Alu 0 311 1 288 77 0 0 chr2 238698151 238698190 -11989664 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 812 177 57 0 chr2 238698197 238698338 -11989516 - FRAM SINE Alu -27 149 1 1345 162 0 14 chr2 238698359 238698581 -11989273 - AluJb SINE Alu -93 219 1 966 305 86 33 chr2 238698714 238699472 -11988382 - L2 LINE L2 -568 2746 1949 1328 183 69 23 chr2 238699514 238699860 -11987994 - LTR10C LTR ERV1 -26 557 214 1140 150 64 16 chr2 238700474 238700661 -11987193 - AluJo SINE Alu -12 300 105 2298 61 11 0 chr2 238700662 238700940 -11986914 + AluY SINE Alu 1 281 -30 1113 207 122 29 chr2 238701007 238701383 -11986471 + L1MD1 LINE L1 5816 6226 -16 181 310 93 70 chr2 238701449 238701578 -11986276 + L2 LINE L2 2783 2914 -400 2118 140 0 0 chr2 238702114 238702421 -11985433 + AluSc SINE Alu 1 307 -2 526 270 105 83 chr2 238703689 238704100 -11983754 - L3 LINE CR1 -72 1505 1086 300 154 0 0 chr2 238704297 238704349 -11983505 + (CA)n Simple_repeat Simple_repeat 2 53 0 9591 221 86 51 chr2 238704349 238704859 -11982995 - L1ME1 LINE L1 -80 6155 5664 2456 71 0 3 chr2 238704859 238705156 -11982698 + AluY SINE Alu 1 296 -15 9591 221 86 51 chr2 238705156 238707675 -11980179 - L1ME1 LINE L1 -571 5664 2997 1475 154 110 29 chr2 238707675 238707947 -11979907 - AluSx SINE Alu -18 294 1 9591 221 86 51 chr2 238707947 238708857 -11978997 - L1ME1 LINE L1 -3238 2997 2120 412 288 157 19 chr2 238709644 238709911 -11977943 - L2 LINE L2 -190 3123 2820 717 206 129 21 chr2 238709926 238710120 -11977734 - MER58C DNA MER1_type 0 215 1 539 239 187 26 chr2 238710143 238710448 -11977406 - L2 LINE L2 -585 2729 2376 1295 150 8 83 chr2 238710762 238710817 -11977037 + MSTB LTR MaLR 1 59 -367 1596 175 43 11 chr2 238710817 238711097 -11976757 + AluJb SINE Alu 1 289 -23 1295 150 8 83 chr2 238711097 238711294 -11976560 + MSTB LTR MaLR 59 234 -192 22 0 0 0 chr2 238711694 238711716 -11976138 + AT_rich Low_complexity Low_complexity 1 22 0 889 216 58 10 chr2 238711785 238711993 -11975861 - MER20 DNA MER1_type 0 219 2 203 290 57 24 chr2 238712046 238712170 -11975684 + L2 LINE L2 3005 3132 -181 2385 209 157 24 chr2 238712171 238712393 -11975461 + Charlie1a DNA MER1_type 8 199 -2562 2040 80 0 15 chr2 238712393 238712655 -11975199 + AluSc SINE Alu 39 296 -13 2385 209 157 24 chr2 238712655 238713140 -11974714 + Charlie1a DNA MER1_type 199 809 -646 1879 152 17 26 chr2 238713140 238713489 -11974365 - MER47A DNA MER2_type 0 366 21 2195 126 7 0 chr2 238713495 238713804 -11974050 - AluSx SINE Alu -1 311 1 2070 167 131 39 chr2 238713812 238714022 -11973832 + Charlie1a DNA MER1_type 808 997 -1764 2077 143 3 3 chr2 238714022 238714330 -11973524 - AluSx SINE Alu 0 312 5 2070 167 131 39 chr2 238714330 238714707 -11973147 + Charlie1a DNA MER1_type 997 1449 -6 426 319 34 34 chr2 238714731 238714935 -11972919 + L2 LINE L2 3110 3313 0 2054 148 0 0 chr2 238715436 238715774 -11972080 + AluSx SINE Alu 1 312 0 2637 117 28 70 chr2 238716141 238716639 -11971215 + Tigger4(Zombi) DNA MER2_type 2254 2730 -1 515 170 19 47 chr2 238717016 238717122 -11970732 + MER50 LTR ERV1 483 585 -149 707 137 0 0 chr2 238717148 238717250 -11970604 + FLAM_C SINE Alu 23 124 -19 1020 107 0 0 chr2 238717383 238717532 -11970322 + AluSg/x SINE Alu 153 301 -11 3388 216 28 45 chr2 238717966 238718542 -11969312 - L1MB4 LINE L1 -2 7616 7061 1869 115 59 3 chr2 238718542 238718829 -11969025 - AluSg SINE Alu -7 303 1 3388 216 28 45 chr2 238718829 238719189 -11968665 - L1MB4 LINE L1 -557 7061 6696 24 53 0 0 chr2 238719234 238719272 -11968582 + AT_rich Low_complexity Low_complexity 1 38 0 6163 194 67 62 chr2 238719286 238719747 -11968107 - L1PA16 LINE L1 0 7604 7147 2013 124 0 0 chr2 238719747 238720056 -11967798 - AluSx SINE Alu 0 309 1 6163 194 67 62 chr2 238720056 238721381 -11966473 - L1PA16 LINE L1 -457 7147 5830 842 126 7 0 chr2 238721381 238721516 -11966338 - AluJb SINE Alu -23 289 154 6163 194 67 62 chr2 238721516 238722103 -11965751 - L1PA16 LINE L1 -1774 5830 5247 1997 132 0 0 chr2 238722103 238722416 -11965438 - AluSg SINE Alu 0 313 1 6163 194 67 62 chr2 238722416 238722961 -11964893 - L1PA16 LINE L1 -2357 5247 4706 2271 106 0 0 chr2 238722961 238723273 -11964581 - AluSq SINE Alu -1 312 1 6163 194 67 62 chr2 238723273 238724710 -11963144 - L1PA16 LINE L1 -2898 4706 2218 498 284 18 5 chr2 238725307 238725502 -11962352 - L1PA16 LINE L1 -5276 2298 2086 1380 312 44 44 chr2 238725505 238726117 -11961737 - L1PA16 LINE L1 -6175 1399 788 752 134 22 0 chr2 238726135 238726269 -11961585 - L1 LINE L1 -1825 4321 4185 2132 104 7 3 chr2 238726818 238727107 -11960747 - AluSx SINE Alu -22 290 1 284 172 0 16 chr2 238727417 238727481 -11960373 + GA-rich Low_complexity Low_complexity 2 64 0 1938 126 0 11 chr2 238727693 238728012 -11959842 + AluSx SINE Alu 1 316 0 488 235 225 24 chr2 238728708 238728921 -11958933 - MLT1G LTR MaLR 0 595 287 569 200 52 58 chr2 238728935 238729090 -11958764 - MLT1G LTR MaLR -427 163 10 412 249 243 16 chr2 238730741 238730926 -11956928 + MIR SINE MIR 5 231 -31 21 0 0 0 chr2 238731070 238731091 -11956763 + AT_rich Low_complexity Low_complexity 1 21 0 1211 224 159 32 chr2 238731189 238731560 -11956294 - MSTB2 LTR MaLR -37 420 3 305 267 42 58 chr2 238731647 238731767 -11956087 - MIR SINE MIR -92 170 53 328 237 99 20 chr2 238731840 238731992 -11955862 + L1ME LINE L1 5583 5746 -375 388 207 143 94 chr2 238732302 238732505 -11955349 + L1MC5 LINE L1 6714 6926 -1035 263 222 47 92 chr2 238732601 238732833 -11955021 + L1MC4 LINE L1 6953 7194 -767 297 0 0 0 chr2 238732833 238732866 -11954988 + (TA)n Simple_repeat Simple_repeat 1 33 0 2017 133 0 3 chr2 238732866 238733167 -11954687 - AluSx SINE Alu -12 300 1 263 222 47 92 chr2 238733167 238733250 -11954604 + L1MC4 LINE L1 7192 7222 -739 785 233 133 54 chr2 238733399 238733902 -11953952 + L1MC5 LINE L1 7309 7851 -110 958 129 6 47 chr2 238734448 238734619 -11953235 - AluSg/x SINE Alu -12 298 135 27 0 0 0 chr2 238735734 238735761 -11952093 + AT_rich Low_complexity Low_complexity 1 27 0 2017 92 9 38 chr2 238735767 238736082 -11951772 + AluSq SINE Alu 1 306 -7 2135 115 0 0 chr2 238737099 238737394 -11950460 + AluSg SINE Alu 1 295 -15 2097 106 7 3 chr2 238737472 238737774 -11950080 + AluSx SINE Alu 1 303 -9 354 266 99 54 chr2 238738943 238739201 -11948653 - L1MC/D LINE L1 -775 5371 5153 2339 54 0 3 chr2 238739216 238739548 -11948306 + AluY SINE Alu 1 311 0 655 190 0 8 chr2 238740068 238740189 -11947665 + FLAM_A SINE Alu 18 137 -5 926 308 100 36 chr2 238740599 238740860 -11946994 - L3 LINE CR1 -429 1148 905 1999 119 35 52 chr2 238740860 238741203 -11946651 + MER1B DNA MER1_type 1 337 0 926 308 100 36 chr2 238741203 238741471 -11946383 - L3 LINE CR1 -672 905 585 435 255 29 91 chr2 238741560 238741768 -11946086 + MER112 DNA MER1_type 48 242 -18 2205 76 7 0 chr2 238741897 238742186 -11945668 + AluSp SINE Alu 1 291 -22 21 57 0 0 chr2 238744517 238744552 -11943302 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 238745853 238745875 -11941979 + AT_rich Low_complexity Low_complexity 1 22 0 1540 188 0 4 chr2 238745881 238746158 -11941696 + AluJb SINE Alu 5 280 -32 2221 95 0 3 chr2 238746225 238746530 -11941324 + AluSx SINE Alu 1 304 -8 504 246 17 0 chr2 238748431 238748549 -11939305 + MER94 DNA DNA 13 132 -2 22 0 0 0 chr2 238748709 238748731 -11939123 + AT_rich Low_complexity Low_complexity 1 22 0 2103 63 7 33 chr2 238749310 238749611 -11938243 + AluY SINE Alu 1 293 -18 475 125 16 125 chr2 238749837 238749897 -11937957 - L1MB8 LINE L1 -2 6176 6136 1428 179 36 4 chr2 238749897 238750177 -11937677 + AluJo SINE Alu 1 289 -23 475 125 16 125 chr2 238750177 238750244 -11937610 - L1MB8 LINE L1 -42 6136 6063 211 304 244 51 chr2 238750570 238750787 -11937067 + MIR SINE MIR 2 260 -2 2279 83 3 0 chr2 238750948 238751250 -11936604 + AluSq SINE Alu 1 303 -10 1173 169 34 0 chr2 238751372 238751579 -11936275 + AluJb SINE Alu 85 298 -14 488 289 159 42 chr2 238751719 238751932 -11935922 - L1 LINE L1 -1624 4522 4335 1911 93 52 10 chr2 238751932 238752221 -11935633 - AluSq SINE Alu -11 302 2 488 289 159 42 chr2 238752221 238752415 -11935439 - L1 LINE L1 -1811 4335 4067 850 118 7 35 chr2 238752670 238752814 -11935040 - FLAM_C SINE Alu -3 140 1 1473 179 25 44 chr2 238754108 238754426 -11933428 - AluJo SINE Alu 0 312 1 331 318 39 17 chr2 238754959 238755138 -11932716 - MIR SINE MIR -53 209 27 290 316 26 9 chr2 238755141 238755255 -11932599 - MIR SINE MIR -56 206 91 310 256 12 35 chr2 238758363 238758449 -11929405 + MER81 DNA DNA 2 85 -29 1152 176 63 0 chr2 238759393 238759615 -11928239 - MER46A DNA MER2_type 0 236 1 2812 82 8 21 chr2 238759898 238760277 -11927577 + THE1C LTR MaLR 1 374 -1 1457 201 0 11 chr2 238760781 238761064 -11926790 + AluJo SINE Alu 1 280 -32 945 232 11 5 chr2 238761105 238761295 -11926559 + LTR10B LTR ERV1 357 547 0 1753 141 44 17 chr2 238761538 238761835 -11926019 + AluJb SINE Alu 5 309 -3 186 103 0 0 chr2 238762059 238762088 -11925766 + (A)n Simple_repeat Simple_repeat 1 29 0 2005 129 3 3 chr2 238764496 238764799 -11923055 + AluSx SINE Alu 1 303 -9 335 289 123 44 chr2 238765337 238765565 -11922289 + L2 LINE L2 2992 3237 -76 384 59 0 0 chr2 238766663 238766714 -11921140 + (GAGAA)n Simple_repeat Simple_repeat 3 53 0 224 183 33 17 chr2 238766731 238766791 -11921063 + GA-rich Low_complexity Low_complexity 1 61 0 2390 176 29 0 chr2 238767243 238767659 -11920195 + MSTA LTR MaLR 1 428 0 339 74 19 0 chr2 238768349 238768403 -11919451 + L1MA3 LINE L1 6251 6305 0 201 318 79 16 chr2 238768505 238768631 -11919223 - L2 LINE L2 -1 3271 3138 403 274 109 77 chr2 238769045 238769226 -11918628 + L1MC5 LINE L1 7452 7645 -316 2308 89 3 0 chr2 238769226 238769529 -11918325 - AluY SINE Alu -7 304 1 403 274 109 77 chr2 238769529 238769595 -11918259 + L1MC5 LINE L1 7645 7707 -254 3038 141 55 31 chr2 238769596 238770179 -11917675 + L1MA9 LINE L1 5710 6306 -6 2020 151 7 0 chr2 238771162 238771460 -11916394 - AluJo SINE Alu -12 300 1 23 54 0 0 chr2 238772082 238772119 -11915735 + AT_rich Low_complexity Low_complexity 1 37 0 360 245 64 27 chr2 238772250 238772431 -11915423 - L1ME4a LINE L1 -221 5900 5716 1798 167 30 0 chr2 238772454 238772753 -11915101 + AluJb SINE Alu 1 308 -4 210 37 0 0 chr2 238772808 238772835 -11915019 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2159 108 0 0 chr2 238772837 238773116 -11914738 - AluSg SINE Alu -27 283 5 1213 209 20 41 chr2 238773203 238773494 -11914360 + Charlie1b DNA MER1_type 1 392 -2369 2167 82 28 10 chr2 238773494 238773785 -11914069 - AluSg SINE Alu -14 296 1 1213 209 20 41 chr2 238773785 238773915 -11913939 + Charlie1b DNA MER1_type 392 523 0 257 333 0 11 chr2 238774038 238774131 -11913723 + CT-rich Low_complexity Low_complexity 3 94 0 2074 159 97 8 chr2 238774290 238774982 -11912872 + MER21A LTR ERV1 1 858 -62 240 167 0 0 chr2 238777221 238777269 -11910585 + (TG)n Simple_repeat Simple_repeat 1 48 0 2036 128 14 0 chr2 238777770 238778093 -11909761 + AluSq SINE Alu 1 327 0 33 73 0 0 chr2 238780837 238780905 -11906949 + GC_rich Low_complexity Low_complexity 1 68 0 399 132 0 0 chr2 238780964 238781032 -11906822 + (CTCA)n Simple_repeat Simple_repeat 1 68 0 285 290 10 50 chr2 238782186 238782286 -11905568 - L2 LINE L2 0 3272 3177 514 136 11 0 chr2 238782689 238782777 -11905077 - Charlie1 DNA MER1_type -53 2708 2620 * 995 165 75 9 chr2 238782758 238782970 -11904884 - Charlie1 DNA MER1_type -2519 242 17 363 183 307 15 chr2 238782990 238783127 -11904727 + HsTC2 DNA Tc2 1 1895 -3 534 236 172 0 chr2 238783625 238783782 -11904072 + MER5A DNA MER1_type 1 184 -5 238 275 175 45 chr2 238783929 238784311 -11903543 + L2 LINE L2 1443 1874 -1440 902 107 0 30 chr2 238784490 238784621 -11903233 + FLAM_C SINE Alu 1 127 -16 1283 180 91 82 chr2 238785046 238785242 -11902612 - L1ME2 LINE L1 -69 6095 5902 2304 114 0 22 chr2 238785242 238785559 -11902295 - AluSx SINE Alu -2 310 1 1283 180 91 82 chr2 238785559 238785811 -11902043 - L1ME2 LINE L1 -262 5902 5643 703 188 14 0 chr2 238785858 238786002 -11901852 - MER97b DNA MER1_type? -882 171 26 3837 224 55 22 chr2 238786032 238787265 -11900589 - L1ME2 LINE L1 -593 5571 4284 2418 78 0 0 chr2 238787265 238787559 -11900295 - AluY SINE Alu -17 294 1 3837 224 55 22 chr2 238787559 238787855 -11899999 - L1ME2 LINE L1 -1880 4284 3999 1258 258 55 12 chr2 238787876 238788295 -11899559 - L1ME3A LINE L1 -95 6075 5639 801 182 8 0 chr2 238788313 238788445 -11899409 - FLAM_C SINE Alu 0 133 1 2141 141 3 6 chr2 238788457 238788769 -11899085 - AluSx SINE Alu -1 311 1 468 290 163 26 chr2 238789272 238789579 -11898275 + L1 LINE L1 4373 4721 -1425 1923 167 10 0 chr2 238789720 238790020 -11897834 + AluJb SINE Alu 9 311 -1 327 215 93 19 chr2 238790060 238790167 -11897687 - MLT1J LTR MaLR -391 120 6 2220 105 13 16 chr2 238790183 238790497 -11897357 + AluSp SINE Alu 1 313 0 31 44 0 0 chr2 238790500 238790545 -11897309 + AT_rich Low_complexity Low_complexity 1 45 0 1755 116 0 4 chr2 238790611 238790852 -11897002 + AluSq SINE Alu 72 311 -2 1289 132 0 0 chr2 238790852 238791029 -11896825 + AluSg/x SINE Alu 134 310 -2 429 311 170 16 chr2 238791031 238791343 -11896511 + L1M4 LINE L1 3125 3484 -2662 348 248 18 44 chr2 238791688 238791801 -11896053 - L1ME4a LINE L1 -59 6062 5953 213 39 0 0 chr2 238791813 238791839 -11896015 + (TG)n Simple_repeat Simple_repeat 1 26 0 243 0 0 0 chr2 238791866 238791893 -11895961 + (TG)n Simple_repeat Simple_repeat 2 28 0 926 176 55 30 chr2 238791901 238792100 -11895754 + MER20 DNA MER1_type 16 219 0 443 182 73 73 chr2 238792149 238792259 -11895595 + MLT1E2 LTR MaLR 1 110 -516 1259 145 5 0 chr2 238792259 238792452 -11895402 + AluSg/x SINE Alu 107 300 -12 277 222 11 44 chr2 238792469 238792559 -11895295 + MLT1E2 LTR MaLR 250 336 -290 1274 142 5 36 chr2 238792568 238792787 -11895067 + AluJo SINE Alu 11 222 -90 354 257 95 72 chr2 238792932 238793191 -11894663 - L1 LINE L1 -2823 3323 3071 235 278 0 0 chr2 238793364 238793418 -11894436 - L1ME4a LINE L1 -376 5745 5692 2332 166 47 41 chr2 238793761 238794180 -11893674 - MLT1C LTR MaLR 0 467 43 2405 105 0 0 chr2 238794180 238794484 -11893370 - AluSx SINE Alu -7 305 2 2332 166 47 41 chr2 238794484 238794528 -11893326 - MLT1C LTR MaLR -424 43 1 363 284 79 77 chr2 238794593 238794766 -11893088 - L1ME4a LINE L1 -133 5988 5817 1183 35 42 0 chr2 238794766 238794909 -11892945 - L1PA3 LINE L1 -7 6148 6000 363 284 79 77 chr2 238794909 238795190 -11892664 - L1ME4a LINE L1 -304 5817 5533 733 283 102 53 chr2 238795197 238796039 -11891815 + L2 LINE L2 2367 3313 0 1923 140 24 0 chr2 238796128 238796294 -11891560 - AluJb SINE Alu -13 299 122 2225 115 3 10 chr2 238796294 238796608 -11891246 - AluSx SINE Alu 0 312 1 1923 140 24 0 chr2 238796608 238796733 -11891121 - AluJb SINE Alu -190 122 1 240 316 52 23 chr2 238796737 238796911 -11890943 - L1ME4a LINE L1 -2375 5433 5255 335 264 127 10 chr2 238797133 238797330 -11890524 - L1ME4a LINE L1 -1437 4709 4490 2121 125 0 23 chr2 238797822 238798127 -11889727 + AluSx SINE Alu 1 298 -14 652 288 82 20 chr2 238798172 238798478 -11889376 - L2 LINE L2 0 3313 2989 1922 98 121 103 chr2 238798856 238799235 -11888619 + MLT1B LTR MaLR 5 390 0 310 233 178 22 chr2 238799730 238799820 -11888034 - L2 LINE L2 -19 3294 3191 * 1341 252 118 21 chr2 238799819 238800402 -11887452 - L2 LINE L2 -747 2567 1928 715 204 94 50 chr2 238800825 238801026 -11886828 - MER20 DNA MER1_type 0 219 10 270 153 0 0 chr2 238801045 238801104 -11886750 + (TGGA)n Simple_repeat Simple_repeat 4 62 0 8556 44 11 0 chr2 238801123 238802081 -11885773 + LTR5 LTR ERVK 1 969 0 786 235 76 55 chr2 238802519 238802757 -11885097 - MIR SINE MIR -8 254 12 939 167 195 27 chr2 238802843 238803100 -11884754 - LOR1a LTR ERV1 0 497 198 380 145 0 0 chr2 238803106 238803175 -11884679 - LOR1a LTR ERV1 -191 306 238 411 237 33 79 chr2 238803616 238803728 -11884126 - MIR SINE MIR -46 216 100 2080 137 0 0 chr2 238803728 238804012 -11883842 + AluSx SINE Alu 1 284 -28 324 0 0 0 chr2 238804012 238804048 -11883806 + (CA)n Simple_repeat Simple_repeat 2 37 0 411 237 33 79 chr2 238804048 238804086 -11883768 - MIR SINE MIR -160 102 72 2283 100 0 52 chr2 238804196 238804526 -11883328 + AluSp SINE Alu 1 313 0 2104 124 0 7 chr2 238804628 238804926 -11882928 + AluJo SINE Alu 1 296 -16 181 161 0 0 chr2 238805237 238805268 -11882586 + MER5C DNA MER1_type 163 193 -131 1668 160 4 0 chr2 238805570 238805833 -11882021 + AluJo SINE Alu 1 264 -48 332 41 41 0 chr2 238805841 238805890 -11881964 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 5427 91 1 1 chr2 238807097 238807788 -11880066 - LTR8 LTR ERV1 0 691 1 285 270 0 20 chr2 238808039 238808139 -11879715 - MLT1H LTR MaLR -84 465 368 784 261 76 43 chr2 238808931 238809354 -11878500 - MLT1H LTR MaLR 0 555 104 2293 128 0 0 chr2 238809355 238809659 -11878195 + AluSx SINE Alu 1 304 -8 1650 232 65 60 chr2 238809758 238810796 -11877058 - L1MEc LINE L1 -3609 2606 1615 1781 173 13 19 chr2 238810817 238811124 -11876730 - AluJb SINE Alu -7 305 1 2194 111 10 7 chr2 238811295 238811592 -11876262 + AluSx SINE Alu 1 298 -14 1949 238 26 10 chr2 238811710 238812210 -11875644 - L1ME1 LINE L1 -55 6111 5604 2229 106 3 7 chr2 238812220 238812522 -11875332 - AluSc SINE Alu -6 303 3 1163 262 38 50 chr2 238812522 238813023 -11874831 - L1M4c LINE L1 -4457 2106 1601 3114 116 5 2 chr2 238813023 238813456 -11874398 - MER57B LTR ERV1 0 434 1 1163 262 38 50 chr2 238813456 238813467 -11874387 - L1M4c LINE L1 -4962 1601 1591 2292 91 7 0 chr2 238813467 238813791 -11874063 + AluSq SINE Alu 1 326 0 1163 262 38 50 chr2 238813791 238813897 -11873957 - L1M4c LINE L1 -4972 1591 1365 3959 105 38 71 chr2 238814638 238815343 -11872511 + LTR8 LTR ERV1 1 682 -9 259 310 35 49 chr2 238815647 238815789 -11872065 - MIR SINE MIR -30 232 93 1771 134 3 25 chr2 239018416 239018728 -11669126 - AluJb SINE Alu 0 310 5 1910 123 0 11 chr2 239018846 239019172 -11668682 - AluSx SINE Alu 0 324 2 681 160 59 48 chr2 239019238 239019425 -11668429 - L1MC4 LINE L1 -113 7929 7741 394 272 133 26 chr2 239019437 239019632 -11668222 - L1MC4 LINE L1 -357 7685 7470 2580 190 30 67 chr2 239019642 239020283 -11667571 - Tigger7 DNA MER2_type -30 2457 101 298 240 188 0 chr2 239020879 239020975 -11666879 - Tigger7 DNA MER2_type -619 114 1 2417 82 36 53 chr2 239021039 239021455 -11666399 - L1MA2 LINE L1 0 6304 5896 629 301 104 0 chr2 239021468 239021717 -11666137 - L1MC4 LINE L1 -664 7378 7104 2037 112 3 10 chr2 239021948 239022244 -11665610 + AluJb SINE Alu 1 294 -18 664 235 101 17 chr2 239022247 239022426 -11665428 - MIR SINE MIR -54 208 15 330 203 179 24 chr2 239022555 239022678 -11665176 + L1ME4a LINE L1 5968 6109 -12 1790 235 67 57 chr2 239023397 239024052 -11663802 + L1MC4a LINE L1 7 668 -5377 853 226 113 8 chr2 239024054 239024291 -11663563 - MLT1C LTR MaLR -1 466 205 748 191 20 0 chr2 239024291 239024438 -11663416 - MER34 LTR ERV1 0 542 393 1154 213 75 80 chr2 239024438 239024799 -11663055 - MLT1A1 LTR MaLR 0 365 7 * 1533 168 4 25 chr2 239024787 239025061 -11662793 - MER34 LTR ERV1 -145 397 130 704 212 27 14 chr2 239025099 239025245 -11662609 - MER34 LTR ERV1 -394 148 1 603 177 111 55 chr2 239025246 239025427 -11662427 - MLT1C LTR MaLR -260 207 17 1067 218 9 56 chr2 239025432 239025515 -11662339 + L1MC4a LINE L1 672 757 -5288 1776 138 32 0 chr2 239025515 239025797 -11662057 + AluSq SINE Alu 1 291 -22 1067 218 9 56 chr2 239025797 239026034 -11661820 + L1MC4a LINE L1 757 977 -5068 744 99 54 0 chr2 239026035 239026146 -11661708 - MER65A LTR ERV1 0 445 329 6732 134 227 37 chr2 239026166 239027591 -11660263 - pTR5 LTR ERV1 0 2438 743 1093 144 5 21 chr2 239027591 239027779 -11660075 - MER65A LTR ERV1 -159 286 102 894 146 156 128 chr2 239027781 239028084 -11659770 + L1MB3 LINE L1 5886 6184 0 * 1263 265 49 26 chr2 239028081 239028571 -11659283 + L1MC4a LINE L1 2690 3190 -3374 * 1464 223 43 36 chr2 239028570 239028988 -11658866 + L1MC4a LINE L1 4141 4561 -2003 337 200 175 0 chr2 239028989 239029069 -11658785 - Tigger3(Golem) DNA MER2_type -41 2988 2895 3011 137 58 6 chr2 239029073 239029586 -11658268 - Tigger3(Golem) DNA MER2_type -96 2933 2394 2194 109 3 3 chr2 239029586 239029898 -11657956 - AluSx SINE Alu 0 312 1 1953 244 69 73 chr2 239029995 239030127 -11657727 + L1MC4a LINE L1 5702 5833 -2393 195 42 0 0 chr2 239030127 239030151 -11657703 + (TTTC)n Simple_repeat Simple_repeat 3 26 0 258 32 0 0 chr2 239030151 239030182 -11657672 + (TCCCC)n Simple_repeat Simple_repeat 2 32 0 1634 183 0 10 chr2 239030182 239030483 -11657371 - AluJb SINE Alu -14 298 1 1953 244 69 73 chr2 239030483 239031184 -11656670 + L1MC4a LINE L1 5830 6534 -1692 1620 173 14 0 chr2 239031222 239031517 -11656337 - AluJb SINE Alu -13 299 1 2702 101 53 5 chr2 239032027 239032564 -11655290 + MER51A LTR ERV1 1 634 0 959 157 0 0 chr2 239032959 239033118 -11654736 + AluJb SINE Alu 154 312 0 1943 141 0 0 chr2 239033356 239033677 -11654177 - AluJo SINE Alu 0 321 1 413 158 0 39 chr2 239033751 239033866 -11653988 + L1MB5 LINE L1 5239 5349 -797 300 155 0 48 chr2 239033966 239034050 -11653804 + L1MB3 LINE L1 5281 5360 -820 1386 172 8 34 chr2 239034056 239034318 -11653536 + AluJo SINE Alu 1 255 -57 3158 151 131 52 chr2 239034318 239034502 -11653352 + L1MB3 LINE L1 5398 5566 -617 1837 134 0 38 chr2 239034502 239034633 -11653221 + AluSg SINE Alu 1 135 -175 186 103 0 0 chr2 239034633 239034662 -11653192 + (TTAA)n Simple_repeat Simple_repeat 4 32 0 1837 134 0 38 chr2 239034662 239034850 -11653004 + AluSg SINE Alu 135 308 -2 3158 151 131 52 chr2 239034850 239035055 -11652799 + L1MB3 LINE L1 5566 5754 -429 2572 121 25 46 chr2 239035055 239035445 -11652409 + MSTA LTR MaLR 1 383 -45 1810 151 3 43 chr2 239035445 239035623 -11652231 - AluJb SINE Alu 0 312 151 2194 91 3 0 chr2 239035623 239035920 -11651934 - AluY SINE Alu -13 298 1 1810 151 3 43 chr2 239035920 239036066 -11651788 - AluJb SINE Alu -161 151 1 2572 121 25 46 chr2 239036066 239036112 -11651742 + MSTA LTR MaLR 383 428 0 3158 151 131 52 chr2 239036112 239036448 -11651406 + L1MB3 LINE L1 5754 6181 -2 474 256 17 8 chr2 239036469 239036586 -11651268 + MER94 DNA DNA 1 118 -16 1878 195 39 23 chr2 239037697 239038087 -11649767 - MSTD LTR MaLR 0 396 1 2572 180 140 24 chr2 239038278 239038440 -11649414 + L1MB5 LINE L1 5444 5586 -588 2257 92 0 0 chr2 239038440 239038735 -11649119 + AluSg SINE Alu 1 295 -15 2572 180 140 24 chr2 239038735 239039195 -11648659 + L1MB5 LINE L1 5586 6138 -36 2013 127 16 0 chr2 239039199 239039506 -11648348 + AluSx SINE Alu 1 312 0 2405 198 82 14 chr2 239039836 239040423 -11647431 + LTR48B LTR ERV1 4 630 -14 435 228 207 16 chr2 239040578 239040771 -11647083 + L1MC4a LINE L1 5883 6112 -1696 1381 130 153 0 chr2 239040785 239040928 -11646926 - AluJo SINE Alu -8 304 184 363 44 0 0 chr2 239040928 239040973 -11646881 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 1381 130 153 0 chr2 239040973 239041083 -11646771 - AluJo SINE Alu -128 184 12 1660 264 152 23 chr2 239041096 239042015 -11645839 + L1MC4a LINE L1 6123 7160 -648 1515 224 79 81 chr2 239043251 239043894 -11643960 + L1MC4 LINE L1 7400 8041 -1 1079 149 0 0 chr2 239044046 239044220 -11643634 + AluSg/x SINE Alu 139 312 0 408 330 8 8 chr2 239044632 239044750 -11643104 - L2 LINE L2 0 3272 3155 228 379 24 8 chr2 239044830 239044954 -11642900 - L2 LINE L2 -785 2529 2404 1325 188 46 68 chr2 239045486 239045586 -11642268 - MER2 DNA MER2_type 0 344 243 1508 162 35 28 chr2 239045586 239045870 -11641984 + AluJo SINE Alu 1 286 -26 1325 188 46 68 chr2 239045870 239045896 -11641958 - MER2 DNA MER2_type -101 243 218 2184 101 0 0 chr2 239045896 239046192 -11641662 + AluSc SINE Alu 1 296 -13 1325 188 46 68 chr2 239046192 239046415 -11641439 - MER2 DNA MER2_type -126 218 2 559 220 226 56 chr2 239046666 239046971 -11640883 - MLT1C LTR MaLR -46 459 103 1808 137 0 18 chr2 239046972 239047257 -11640597 + AluJb SINE Alu 3 282 -30 333 0 0 0 chr2 239047260 239047297 -11640557 + (CA)n Simple_repeat Simple_repeat 1 37 0 240 128 0 0 chr2 239047364 239047403 -11640451 - MLT1C LTR MaLR -360 107 69 320 245 32 11 chr2 239047437 239047531 -11640323 - MLT1C LTR MaLR -371 96 1 1133 203 67 111 chr2 239048760 239049237 -11638617 - MLT2C2 LTR ERVL -2 462 7 432 251 206 6 chr2 239049638 239049813 -11638041 + L2 LINE L2 3103 3312 -1 190 206 16 95 chr2 239049796 239049859 -11637995 - L2 LINE L2 -1 3271 3214 * 406 275 114 18 chr2 239050671 239050838 -11637016 + MIR SINE MIR 37 219 -43 684 264 128 65 chr2 239050957 239051236 -11636618 + MLT1J LTR MaLR 64 344 -106 412 42 0 0 chr2 239052004 239052052 -11635802 + (T)n Simple_repeat Simple_repeat 1 48 0 737 143 0 8 chr2 239052065 239052184 -11635670 + AluYa5 SINE Alu 137 254 -57 1522 173 7 7 chr2 239052200 239052484 -11635370 - AluSx SINE Alu -25 287 4 25 31 0 0 chr2 239052550 239052582 -11635272 + AT_rich Low_complexity Low_complexity 1 32 0 250 260 146 10 chr2 239054497 239054593 -11633261 - MIR SINE MIR 0 262 154 259 272 87 23 chr2 239054774 239054947 -11632907 + MIR3 SINE MIR 4 187 -21 2208 87 0 16 chr2 239055524 239055834 -11632020 - AluSx SINE Alu -7 305 1 246 220 140 0 chr2 239056452 239056552 -11631302 - L1MC/D LINE L1 -2331 5477 5364 331 189 163 92 chr2 239056824 239056977 -11630877 - L1MC/D LINE L1 -2918 3228 3065 21 0 0 0 chr2 239057101 239057122 -11630732 + AT_rich Low_complexity Low_complexity 1 21 0 771 259 49 31 chr2 239057157 239057482 -11630372 - HAL1b LINE L1 -417 931 601 2012 150 54 11 chr2 239057498 239057852 -11630002 - L1MC2 LINE L1 -37 6307 5939 309 231 77 0 chr2 239057865 239057956 -11629898 - L1M4 LINE L1 -2760 3386 3289 21 36 0 0 chr2 239057960 239057988 -11629866 + AT_rich Low_complexity Low_complexity 1 28 0 1025 184 60 0 chr2 239057995 239058228 -11629626 - L1MA8 LINE L1 -12 6279 6033 431 126 48 58 chr2 239058228 239058331 -11629523 - L1MC2 LINE L1 -374 5959 5858 376 135 0 0 chr2 239058501 239058553 -11629301 + MER66B LTR ERV1 296 347 -139 42 20 0 0 chr2 239058553 239058602 -11629252 + AT_rich Low_complexity Low_complexity 1 49 0 222 156 0 0 chr2 239058711 239058756 -11629098 + T-rich Low_complexity Low_complexity 1 45 0 1737 151 10 3 chr2 239058867 239059158 -11628696 - AluSx SINE Alu -19 293 1 2202 146 5 3 chr2 239059301 239059670 -11628184 - L1P LINE L1 -1569 4577 4208 598 333 86 22 chr2 239059688 239060198 -11627656 + HERV16 LTR ERVL 2485 3028 -1968 417 244 89 39 chr2 239060713 239060893 -11626961 - MER5A DNA MER1_type 0 189 1 419 272 128 28 chr2 239060913 239061093 -11626761 + MIR SINE MIR 64 261 -1 2249 94 0 7 chr2 239061122 239061429 -11626425 - AluSx SINE Alu -7 305 1 314 302 147 0 chr2 239061522 239061638 -11626216 - L2 LINE L2 -259 3054 2922 238 314 98 29 chr2 239061714 239061816 -11626038 - L2 LINE L2 -1 3271 3163 1920 112 35 3 chr2 239061832 239062117 -11625737 + AluSq SINE Alu 2 295 -18 1212 117 0 0 chr2 239062117 239062288 -11625566 + AluSg/x SINE Alu 132 302 -8 969 289 199 36 chr2 239062589 239063420 -11624434 + L2 LINE L2 412 1387 -1927 2211 110 7 0 chr2 239063420 239063730 -11624124 - AluSx SINE Alu 0 312 1 969 289 199 36 chr2 239063730 239063750 -11624104 + L2 LINE L2 1387 1402 -1912 1993 142 3 0 chr2 239063750 239064052 -11623802 - AluJb SINE Alu -9 303 1 180 167 0 0 chr2 239064130 239064160 -11623694 + L2 LINE L2 2258 2287 -1027 357 143 48 0 chr2 239064160 239064223 -11623631 - LTR19A LTR ERV1 0 486 421 * 2516 97 78 18 chr2 239064219 239064601 -11623253 + LTR19B LTR ERV1 176 580 0 517 299 151 39 chr2 239064601 239064987 -11622867 + L2 LINE L2 2283 2761 -553 1633 121 21 114 chr2 239064987 239065108 -11622746 + AluJo SINE Alu 2 133 -169 2265 101 0 0 chr2 239065108 239065414 -11622440 + AluSq SINE Alu 1 306 -7 1633 121 21 114 chr2 239065414 239065624 -11622230 + AluJo SINE Alu 133 302 0 517 299 151 39 chr2 239065624 239065832 -11622022 + L2 LINE L2 2761 2944 -370 308 209 91 55 chr2 239065866 239065976 -11621878 + L2 LINE L2 3014 3127 -186 252 180 20 0 chr2 239066002 239066052 -11621802 - L2 LINE L2 -17 3296 3246 465 255 193 58 chr2 239066061 239066478 -11621376 - L2 LINE L2 -179 3134 2631 1409 167 44 51 chr2 239066516 239066810 -11621044 + AluJo SINE Alu 1 292 -20 270 340 70 0 chr2 239066835 239066935 -11620919 - MIR SINE MIR -66 142 36 1802 214 40 38 chr2 239067066 239067562 -11620292 - MLT1D LTR MaLR -8 497 1 343 244 117 49 chr2 239067992 239068197 -11619657 - L1ME4a LINE L1 -137 5984 5766 22 56 0 0 chr2 239068410 239068446 -11619408 + AT_rich Low_complexity Low_complexity 1 36 0 1712 171 0 11 chr2 239068447 239068734 -11619120 - AluJo SINE Alu -24 288 5 847 142 0 0 chr2 239068763 239068890 -11618964 - FLAM_C SINE Alu -6 127 1 2231 94 0 0 chr2 239068897 239069204 -11618650 - AluSg SINE Alu -3 307 1 1945 126 11 28 chr2 239069204 239069562 -11618292 - L1M2 LINE L1 -697 5615 5264 318 247 0 25 chr2 239069987 239070068 -11617786 - L2 LINE L2 -52 3261 3183 363 312 35 71 chr2 239070185 239070222 -11617632 - L3 LINE CR1 -15 1562 1525 1620 166 3 33 chr2 239070222 239070329 -11617525 + AluJb SINE Alu 6 115 -197 2058 122 0 10 chr2 239070329 239070633 -11617221 - AluSx SINE Alu -11 301 1 1620 166 3 33 chr2 239070633 239070826 -11617028 + AluJb SINE Alu 115 297 -15 363 312 35 71 chr2 239070826 239070958 -11616896 - L3 LINE CR1 -52 1525 1399 1977 138 3 0 chr2 239070961 239071265 -11616589 - AluSx SINE Alu -7 305 1 29 0 0 0 chr2 239071265 239071294 -11616560 + AT_rich Low_complexity Low_complexity 1 29 0 769 185 0 0 chr2 239071294 239071413 -11616441 - FLAM_C SINE Alu -23 120 2 3951 152 29 32 chr2 239072187 239072557 -11615297 - L1MB2 LINE L1 -7 6164 5795 243 61 0 0 chr2 239072557 239072590 -11615264 + (CA)n Simple_repeat Simple_repeat 1 33 0 3951 152 29 32 chr2 239072590 239072669 -11615185 - L1MB2 LINE L1 -376 5795 5717 2118 98 0 36 chr2 239072669 239072976 -11614878 + AluSq SINE Alu 1 296 -17 3951 152 29 32 chr2 239072976 239073283 -11614571 - L1MB2 LINE L1 -454 5717 5409 299 132 0 0 chr2 239073533 239073586 -11614268 - L1MB2 LINE L1 -47 6124 6072 1894 158 7 0 chr2 239074588 239074892 -11612962 - AluJb SINE Alu -6 306 1 2227 98 0 0 chr2 239074904 239075201 -11612653 - AluSg SINE Alu -9 301 5 893 126 0 0 chr2 239076791 239076918 -11610936 - FLAM_C SINE Alu -16 127 1 218 215 127 25 chr2 239077490 239077569 -11610285 - MIR SINE MIR -77 131 45 348 209 132 28 chr2 239077684 239077866 -11609988 + L1ME4a LINE L1 5710 5910 -211 680 217 149 3 chr2 239078466 239078691 -11609163 + L1ME3 LINE L1 5699 5954 -208 1837 127 57 0 chr2 239078732 239079015 -11608839 + AluSx SINE Alu 1 299 -13 2002 87 0 8 chr2 239079152 239079418 -11608436 - AluSx SINE Alu -43 269 6 260 188 0 0 chr2 239079418 239079466 -11608388 - Alu SINE Alu -2 306 259 225 151 41 68 chr2 239079769 239079842 -11608012 + A-rich Low_complexity Low_complexity 3 73 0 2301 90 0 0 chr2 239080183 239080482 -11607372 - AluSq SINE Alu -14 299 1 457 301 129 22 chr2 239080790 239081220 -11606634 - L1MEd LINE L1 -4692 1692 1276 247 116 0 0 chr2 239081230 239081273 -11606581 - L1MB4 LINE L1 -12 6168 6126 839 129 53 0 chr2 239081285 239081417 -11606437 - FRAM SINE Alu -30 146 8 494 247 66 48 chr2 239081468 239081739 -11606115 - L1MEd LINE L1 -5014 1358 1083 2237 105 0 0 chr2 239081745 239082051 -11605803 + AluSx SINE Alu 1 306 -6 1926 204 51 31 chr2 239082452 239082902 -11604952 - MLT1C LTR MaLR -8 459 1 2003 105 23 26 chr2 239082977 239083281 -11604573 + AluSx SINE Alu 1 303 -9 525 200 9 9 chr2 239084646 239084761 -11603093 - L1MB8 LINE L1 0 6178 6064 365 270 18 27 chr2 239084763 239084874 -11602980 + MER94 DNA DNA 23 132 -2 424 113 0 32 chr2 239085429 239085491 -11602363 - MER66A LTR ERV1 -138 340 281 25 31 0 0 chr2 239085542 239085574 -11602280 + AT_rich Low_complexity Low_complexity 1 32 0 1626 152 10 29 chr2 239085594 239085903 -11601951 + AluJb SINE Alu 1 303 -9 379 286 57 0 chr2 239085904 239086009 -11601845 + MIR SINE MIR 149 259 -3 200 274 97 16 chr2 239086138 239086200 -11601654 - L2 LINE L2 -5 3308 3242 342 289 237 5 chr2 239086237 239086484 -11601370 - L2 LINE L2 -256 3016 2720 270 145 16 32 chr2 239086505 239086567 -11601287 - L1ME4a LINE L1 0 6121 6061 2930 129 29 102 chr2 239086682 239087277 -11600577 + L1MB8 LINE L1 5565 6202 24 212 0 36 0 chr2 239087277 239087305 -11600549 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1964 121 0 0 chr2 239087307 239087580 -11600274 - AluSq SINE Alu -34 279 7 2930 129 29 102 chr2 239087580 239087638 -11600216 + L1MB8 LINE L1 6112 6173 -5 541 209 23 47 chr2 239087665 239087794 -11600060 - MIR SINE MIR -136 126 1 37 0 0 0 chr2 239088551 239088588 -11599266 + AT_rich Low_complexity Low_complexity 1 37 0 870 264 71 29 chr2 239089650 239090126 -11597728 - MLT1G3 LTR MaLR -11 584 6 1581 172 31 3 chr2 239091512 239091802 -11596052 + AluJo SINE Alu 6 303 -9 1685 186 45 12 chr2 239092023 239092356 -11595498 + MER2 DNA MER2_type 1 344 0 1836 138 25 0 chr2 239092825 239093107 -11594747 - AluSx SINE Alu -19 293 5 2071 105 0 0 chr2 239093122 239093416 -11594438 - AluSx SINE Alu -18 294 1 2370 70 0 0 chr2 239093453 239093751 -11594103 - AluSc SINE Alu -11 298 1 231 276 39 103 chr2 239093775 239093883 -11593971 + L3 LINE CR1 1424 1521 -56 2164 108 3 0 chr2 239093883 239094178 -11593676 - AluSq SINE Alu -17 296 1 231 276 39 103 chr2 239094178 239094225 -11593629 + L3 LINE CR1 1521 1569 -8 2302 94 0 0 chr2 239094269 239094578 -11593276 - AluSx SINE Alu -3 309 1 376 352 68 12 chr2 239094714 239094876 -11592978 + MER5A DNA MER1_type 8 189 0 2362 64 3 0 chr2 239094922 239095217 -11592637 + AluSp SINE Alu 1 296 -17 573 275 68 24 chr2 239095281 239095488 -11592366 - MIR SINE MIR 0 262 47 1986 101 0 34 chr2 239096029 239096325 -11591529 - AluSx SINE Alu -18 294 9 2281 97 3 0 chr2 239097060 239097369 -11590485 - AluSp SINE Alu -3 310 1 792 143 0 38 chr2 239097381 239097514 -11590340 - FLAM_C SINE Alu -14 129 2 228 339 105 0 chr2 239097598 239097846 -11590008 - L1M4 LINE L1 -1801 4345 4072 256 130 0 22 chr2 239097897 239097943 -11589911 - L1MD1 LINE L1 -22 6220 6176 835 139 8 8 chr2 239097943 239098072 -11589782 + AluJb SINE Alu 2 130 -182 24 0 0 29 chr2 239098072 239098086 -11589768 + AT_rich Low_complexity Low_complexity 1 14 -20 1770 128 31 10 chr2 239098086 239098374 -11589480 + AluSq SINE Alu 1 294 -19 24 0 0 29 chr2 239098374 239098394 -11589460 + AT_rich Low_complexity Low_complexity 14 34 0 306 73 0 0 chr2 239098594 239098635 -11589219 + (TG)n Simple_repeat Simple_repeat 2 42 0 1209 260 107 18 chr2 239098686 239099175 -11588679 - L1MC4a LINE L1 -599 5555 5368 294 29 0 0 chr2 239099175 239099210 -11588644 + (TA)n Simple_repeat Simple_repeat 1 35 0 1209 260 107 18 chr2 239099210 239099229 -11588625 - L1MC4a LINE L1 -786 5368 5352 413 327 32 80 chr2 239099336 239099773 -11588081 - L2 LINE L2 -1287 2027 1612 1821 158 3 10 chr2 239099777 239100080 -11587774 - AluJb SINE Alu -11 301 1 223 214 0 71 chr2 239100836 239100892 -11586962 - L2 LINE L2 -2 3270 3219 1493 251 55 73 chr2 239101831 239102344 -11585510 - L1MC4 LINE L1 0 8042 7542 2227 83 0 10 chr2 239102344 239102644 -11585210 + AluSg SINE Alu 2 298 -12 1493 251 55 73 chr2 239102644 239102784 -11585070 - L1MC4 LINE L1 -500 7542 7401 1742 154 7 13 chr2 239104258 239104392 -11583462 + AluJb SINE Alu 1 134 -178 2415 60 0 3 chr2 239104392 239104691 -11583163 + AluY SINE Alu 1 298 -13 1742 154 7 13 chr2 239104691 239104855 -11582999 + AluJb SINE Alu 134 297 -15 1932 134 3 13 chr2 239105792 239106097 -11581757 - AluJo SINE Alu -10 302 1 183 100 0 0 chr2 239106899 239106929 -11580925 + (TTAGGG)n Simple_repeat Simple_repeat 4 33 0 3715 142 36 0 chr2 239107627 239108234 -11579620 - L1PA16 LINE L1 -2 6164 5536 795 169 169 0 chr2 239108244 239108387 -11579467 - AluJb SINE Alu -11 301 129 2249 81 3 0 chr2 239108387 239108682 -11579172 - AluY SINE Alu -15 296 1 2230 99 0 0 chr2 239109076 239109368 -11578486 + AluSx SINE Alu 1 292 -20 2374 82 3 0 chr2 239109955 239110261 -11577593 + AluSg SINE Alu 1 307 -3 204 347 41 0 chr2 239111035 239111133 -11576721 + L2 LINE L2 3160 3261 -11 818 200 42 0 chr2 239111718 239111883 -11575971 - MER20 DNA MER1_type -46 173 2 298 260 323 31 chr2 239112231 239112423 -11575431 + MIR SINE MIR 13 260 -2 2205 116 0 0 chr2 239112580 239112890 -11574964 - AluSg SINE Alu 0 310 1 453 248 9 19 chr2 239112899 239113004 -11574850 - MIR SINE MIR -66 196 93 299 266 91 49 chr2 239112986 239113129 -11574725 + L2 LINE L2 3164 3312 -1 * 1276 145 19 0 chr2 239113151 239113365 -11574489 - AluJo SINE Alu -13 299 82 2197 101 0 0 chr2 239113677 239113974 -11573880 - AluSq SINE Alu -16 297 1 1857 133 0 11 chr2 239114065 239114350 -11573504 - AluJb SINE Alu -16 296 15 1703 128 36 16 chr2 239114536 239114842 -11573012 - AluSx SINE Alu 0 312 1 716 119 0 0 chr2 239114891 239114992 -11572862 + AluSg/x SINE Alu 200 300 -12 463 191 75 0 chr2 239115064 239115158 -11572696 - MER5A DNA MER1_type -80 109 9 373 333 20 50 chr2 239115473 239115671 -11572183 + L1MC/D LINE L1 4911 5102 -1044 255 245 19 0 chr2 239115868 239115921 -11571933 + L1MC/D LINE L1 5570 5623 -2185 884 118 0 22 chr2 239115970 239116105 -11571749 + FLAM_A SINE Alu 6 137 -5 571 253 74 64 chr2 239116171 239116578 -11571276 - L1MC5 LINE L1 -52 7909 7499 369 0 0 0 chr2 239116608 239116649 -11571205 + (CA)n Simple_repeat Simple_repeat 2 42 0 376 175 0 0 chr2 239116977 239117040 -11570814 - MER41A LTR ERV1 -101 453 391 2279 82 0 10 chr2 239117183 239117489 -11570365 + AluY SINE Alu 1 303 -8 1984 112 37 0 chr2 239118247 239118542 -11569312 - AluSp SINE Alu -7 306 1 701 268 24 6 chr2 239119016 239119184 -11568670 + MIR SINE MIR 40 210 -52 387 261 18 29 chr2 239119184 239119326 -11568528 - L1MD3 LINE L1 -104 7891 7678 2148 86 20 7 chr2 239119605 239119908 -11567946 - AluSx SINE Alu -5 307 1 1887 151 118 47 chr2 239121009 239121138 -11566716 - Charlie1b DNA MER1_type -2242 519 400 2017 122 0 10 chr2 239121138 239121441 -11566413 + AluSx SINE Alu 1 300 -12 1887 151 118 47 chr2 239121441 239121796 -11566058 - Charlie1b DNA MER1_type -2361 400 1 229 255 0 0 chr2 239122832 239122879 -11564975 + (CACG)n Simple_repeat Simple_repeat 1 47 0 2262 61 7 3 chr2 239123252 239123548 -11564306 - AluY SINE Alu -14 297 1 348 340 86 24 chr2 239124247 239124456 -11563398 + MIR SINE MIR 20 241 -21 1369 204 111 17 chr2 239124690 239125052 -11562802 - MSTD LTR MaLR 0 396 1 544 248 0 21 chr2 239125343 239125488 -11562366 + MER104 DNA Tc2 4 145 -35 2170 98 7 0 chr2 239125618 239125905 -11561949 - AluSq SINE Alu -24 289 1 2070 102 3 0 chr2 239125909 239126223 -11561631 - AluSp SINE Alu 0 315 1 1896 117 35 0 chr2 239126252 239126542 -11561312 + AluSc SINE Alu 2 301 -8 3156 94 29 0 chr2 239126556 239127002 -11560852 + L1PB2 LINE L1 5522 5980 -171 512 159 56 9 chr2 239127010 239127117 -11560737 + L1PB2 LINE L1 6037 6148 -3 1904 135 34 3 chr2 239127148 239127444 -11560410 + AluSx SINE Alu 1 305 -7 881 203 51 0 chr2 239127588 239127765 -11560089 - MER5A DNA MER1_type -1 188 3 2078 150 30 28 chr2 239127887 239128281 -11559573 - L1MB3 LINE L1 -41 6142 5748 2148 106 7 0 chr2 239128650 239128952 -11558902 - AluSx SINE Alu -8 304 1 1946 208 109 25 chr2 239129222 239129781 -11558073 + L1ME3A LINE L1 5562 6167 -3 2004 210 115 67 chr2 239129874 239130201 -11557653 - HAL1 LINE L1 -660 1847 1537 1570 148 23 43 chr2 239130201 239130506 -11557348 + AluJo SINE Alu 1 299 -13 2004 210 115 67 chr2 239130506 239130811 -11557043 - HAL1 LINE L1 -970 1537 1248 1902 100 73 0 chr2 239130811 239131100 -11556754 - AluSg SINE Alu 0 310 1 2004 210 115 67 chr2 239131100 239131779 -11556075 - HAL1 LINE L1 -1259 1248 421 719 284 67 8 chr2 239131841 239132109 -11555745 - HAL1 LINE L1 -2220 287 4 237 203 34 17 chr2 239132136 239132195 -11555659 - MIR SINE MIR -20 242 183 1515 185 7 14 chr2 239133609 239133906 -11553948 - AluJb SINE Alu -7 305 11 2005 103 7 3 chr2 239133922 239134237 -11553617 - AluSx SINE Alu 0 316 1 1095 91 0 0 chr2 239134993 239135136 -11552718 - AluSq/x SINE Alu -170 143 1 2578 193 34 20 chr2 239135157 239135541 -11552313 - L1MB7 LINE L1 -11 6173 5777 2240 91 0 0 chr2 239135541 239135837 -11552017 - AluSg SINE Alu -14 296 1 2578 193 34 20 chr2 239135837 239136011 -11551843 - L1MB7 LINE L1 -407 5777 5607 2266 93 3 0 chr2 239137093 239137394 -11550460 + AluSp SINE Alu 1 302 -11 2338 76 3 0 chr2 239137689 239137991 -11549863 - AluSx SINE Alu -9 303 1 2026 120 3 10 chr2 239138984 239139284 -11548570 - AluSx SINE Alu -14 298 1 569 277 16 37 chr2 239139495 239139683 -11548171 - MIR SINE MIR 0 262 79 215 360 22 11 chr2 239139682 239139771 -11548083 - MIR3 SINE MIR -109 99 10 * 241 163 41 41 chr2 239140580 239140629 -11547225 - L1MB7 LINE L1 -2409 5586 5538 2325 93 0 3 chr2 239140920 239141231 -11546623 - AluSg SINE Alu 0 310 1 2069 117 0 16 chr2 239141594 239141910 -11545944 + AluSx SINE Alu 1 311 -1 294 95 0 0 chr2 239141930 239141972 -11545882 + (CATA)n Simple_repeat Simple_repeat 4 45 0 614 295 58 25 chr2 239142020 239142480 -11545374 + L1ME4a LINE L1 5106 5579 -749 539 356 142 14 chr2 239142728 239143360 -11544494 - L2 LINE L2 -341 2973 2261 307 241 64 21 chr2 239144576 239144717 -11543137 + L1M4c LINE L1 1178 1324 -5060 229 259 0 0 chr2 239144741 239144795 -11543059 + L1M4c LINE L1 3059 3112 -3270 1122 217 124 68 chr2 239144796 239144854 -11543000 - MLT1F LTR MaLR -1 592 539 2045 141 0 0 chr2 239144854 239145153 -11542701 - AluSx SINE Alu -13 299 1 1533 166 38 7 chr2 239145155 239145445 -11542409 - AluJb SINE Alu -13 299 1 1122 217 124 68 chr2 239145445 239145462 -11542392 - MLT1F LTR MaLR -54 539 524 1818 181 26 9 chr2 239145462 239145804 -11542050 + MER7A DNA MER2_type 1 346 0 1122 217 124 68 chr2 239145804 239146223 -11541631 - MLT1F LTR MaLR -69 524 1 245 200 15 46 chr2 239146223 239146288 -11541566 + L1M4c LINE L1 3109 3171 -3211 2156 112 0 0 chr2 239146341 239146637 -11541217 + AluSg SINE Alu 1 296 -14 2172 97 0 0 chr2 239146791 239147081 -11540773 + AluSx SINE Alu 5 294 -18 434 250 0 0 chr2 239147330 239147406 -11540448 - LTR67 LTR ERVL -367 190 115 2264 83 3 0 chr2 239147536 239147836 -11540018 - AluSx SINE Alu -9 303 3 282 313 102 36 chr2 239147863 239148195 -11539659 + L1ME4a LINE L1 5554 5907 -214 276 247 31 52 chr2 239148508 239148605 -11539249 - LTR67 LTR ERVL -88 469 375 552 268 76 25 chr2 239148642 239148840 -11539014 - LTR67 LTR ERVL -263 294 87 252 0 0 0 chr2 239148953 239148981 -11538873 + (CTTTG)n Simple_repeat Simple_repeat 4 31 0 555 93 13 0 chr2 239148993 239149068 -11538786 - FLAM_A SINE Alu -29 113 38 208 59 39 59 chr2 239149079 239149130 -11538724 + (CATGT)n Simple_repeat Simple_repeat 1 50 0 229 182 0 0 chr2 239149135 239149168 -11538686 - FLAM_A SINE Alu -98 33 1 312 270 126 0 chr2 239149212 239149350 -11538504 + L1ME4a LINE L1 5618 5770 -351 615 303 100 0 chr2 239149366 239149597 -11538257 + MIR SINE MIR 9 262 0 499 210 154 0 chr2 239149712 239149855 -11537999 + L1ME4a LINE L1 5956 6120 -1 312 309 107 0 chr2 239150064 239150213 -11537641 - MIR SINE MIR -70 192 28 1852 153 0 0 chr2 239150623 239150910 -11536944 + AluJb SINE Alu 16 302 -10 206 273 0 0 chr2 239151388 239151432 -11536422 - L2 LINE L2 -19 3294 3251 327 287 0 11 chr2 239151437 239151531 -11536323 - L1ME2 LINE L1 -10 6154 6062 275 258 34 22 chr2 239151572 239151661 -11536193 - MIR SINE MIR -109 153 64 582 212 69 78 chr2 239151784 239152015 -11535839 - MLT1K LTR MaLR -46 542 314 2243 86 3 0 chr2 239152957 239153248 -11534606 + AluSg SINE Alu 1 292 -18 2367 77 3 0 chr2 239153308 239153608 -11534246 + AluSx SINE Alu 1 301 -11 344 238 172 20 chr2 239154275 239154426 -11533428 + MER5B DNA MER1_type 5 178 0 252 363 30 0 chr2 239156867 239157002 -11530852 - MIR SINE MIR -7 255 117 451 201 169 19 chr2 239157133 239157287 -11530567 + MIR SINE MIR 20 196 -66 260 181 181 0 chr2 239157781 239157853 -11530001 - MLT1H LTR MaLR -67 482 398 251 291 97 29 chr2 239158723 239158826 -11529028 - MIR3 SINE MIR -45 163 54 1305 225 111 3 chr2 239158826 239159133 -11528721 - MER58B DNA MER1_type 0 341 2 24 32 0 0 chr2 239159222 239159253 -11528601 + AT_rich Low_complexity Low_complexity 1 31 0 387 247 21 21 chr2 239159840 239159933 -11527921 + MARNA DNA Mariner 412 504 -82 1831 116 43 4 chr2 239160084 239160360 -11527494 + AluSg SINE Alu 1 287 -23 199 242 65 16 chr2 239160417 239160479 -11527375 - L3 LINE CR1 -206 1371 1307 23 33 0 0 chr2 239160584 239160614 -11527240 + AT_rich Low_complexity Low_complexity 1 30 0 380 316 149 7 chr2 239160873 239161174 -11526680 - L2 LINE L2 -1360 1954 1611 974 232 40 27 chr2 239161924 239162148 -11525706 - MIR SINE MIR -33 229 3 297 304 107 49 chr2 239162683 239162946 -11524908 - L1ME2 LINE L1 -2074 5734 5457 1891 128 14 0 chr2 239163117 239163406 -11524448 + AluSx SINE Alu 1 293 -19 1661 179 63 89 chr2 239163602 239164140 -11523714 - Charlie1 DNA MER1_type -6 2755 2232 2141 104 0 3 chr2 239164140 239164438 -11523416 + AluSx SINE Alu 1 297 -15 1661 179 63 89 chr2 239164438 239164497 -11523357 - Charlie1 DNA MER1_type -529 2232 2173 1649 204 52 84 chr2 239164497 239164651 -11523203 - L1M4 LINE L1 -1776 4370 4213 252 0 0 0 chr2 239164651 239164679 -11523175 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 1649 204 52 84 chr2 239164679 239165057 -11522797 - L1M4 LINE L1 -1933 4213 3855 2065 112 7 0 chr2 239165075 239165362 -11522492 + AluSx SINE Alu 1 289 -23 2019 101 14 0 chr2 239165369 239165646 -11522208 + AluSc SINE Alu 1 281 -28 3992 199 93 28 chr2 239165711 239165818 -11522036 - Charlie1 DNA MER1_type -572 2189 2090 2037 111 3 10 chr2 239165818 239166116 -11521738 - AluSx SINE Alu -16 296 1 3992 199 93 28 chr2 239166116 239167065 -11520789 - Charlie1 DNA MER1_type -671 2090 1074 301 125 107 0 chr2 239167159 239167215 -11520639 - L1MD3 LINE L1 -25 7970 7909 365 149 0 103 chr2 239167219 239167306 -11520548 - Charlie1 DNA MER1_type -1756 1005 928 1237 154 15 54 chr2 239167341 239167600 -11520254 - Charlie1 DNA MER1_type -1828 933 685 299 137 305 11 chr2 239167636 239167731 -11520123 - L1M4 LINE L1 -1537 4609 4487 1620 217 101 26 chr2 239168549 239168989 -11518865 - MER74A LTR ERVL -64 396 1 223 325 25 0 chr2 239169488 239169568 -11518286 - L2 LINE L2 -557 2757 2676 570 314 49 9 chr2 239169606 239169829 -11518025 - MIR SINE MIR -4 258 27 207 250 71 89 chr2 239169947 239170059 -11517795 - L2 LINE L2 -868 2446 2337 24 53 0 0 chr2 239170900 239170938 -11516916 + AT_rich Low_complexity Low_complexity 1 38 0 2243 60 7 17 chr2 239171552 239171852 -11516002 + AluSp SINE Alu 1 297 -16 2254 68 7 26 chr2 239171868 239172176 -11515678 + AluSp SINE Alu 1 302 -11 1887 164 0 3 chr2 239172264 239172574 -11515280 + AluJb SINE Alu 1 309 -3 292 351 18 0 chr2 239172758 239172872 -11514982 + L2 LINE L2 3151 3266 -6 2214 110 0 0 chr2 239172908 239173216 -11514638 + AluSx SINE Alu 2 309 -3 284 186 12 35 chr2 239173366 239173452 -11514402 - L1ME3A LINE L1 -221 5949 5866 955 225 143 46 chr2 239173452 239173893 -11513961 - MLT1H LTR MaLR -7 525 57 180 361 0 28 chr2 239174226 239174298 -11513556 + MIR SINE MIR 173 242 -20 238 227 0 0 chr2 239174382 239174426 -11513428 - L2 LINE L2 0 3313 3270 1594 201 61 21 chr2 239174434 239174863 -11512991 - L1M4 LINE L1 -3539 2607 2162 1007 195 4 49 chr2 239174878 239175145 -11512709 - L1MB8 LINE L1 -1 6177 5923 1711 155 3 23 chr2 239175164 239175474 -11512380 - AluJb SINE Alu -3 309 6 2271 90 6 0 chr2 239175486 239175797 -11512057 - AluSp SINE Alu 0 313 1 2057 203 19 52 chr2 239175797 239175923 -11511931 - L1MB8 LINE L1 -950 5196 5067 1353 153 5 18 chr2 239175923 239176145 -11511709 - MER20 DNA MER1_type 0 219 1 2057 203 19 52 chr2 239176145 239176385 -11511469 - L1MB8 LINE L1 -1079 5067 4821 2135 100 24 0 chr2 239176385 239176676 -11511178 + AluSg SINE Alu 1 298 -12 1973 121 0 7 chr2 239176677 239176980 -11510874 + AluSg SINE Alu 2 302 0 2057 203 19 52 chr2 239176980 239177142 -11510712 - L1MB8 LINE L1 -1324 4822 4680 1577 234 107 117 chr2 239177122 239177568 -11510286 - L1ME LINE L1 -4106 2155 1706 * 363 44 0 0 chr2 239177568 239177613 -11510241 + (TG)n Simple_repeat Simple_repeat 2 46 0 1577 234 107 117 chr2 239177613 239177798 -11510056 - L1ME LINE L1 -4555 1706 1521 2003 86 41 54 chr2 239177798 239178113 -11509741 + AluSx SINE Alu 1 311 -1 1577 234 107 117 chr2 239178113 239178180 -11509674 - L1ME LINE L1 -4740 1521 1455 1471 145 0 0 chr2 239178180 239178407 -11509447 - AluSg/x SINE Alu -10 300 74 1577 234 107 117 chr2 239178407 239178596 -11509258 - L1ME LINE L1 -4806 1455 1266 2058 119 0 0 chr2 239178596 239178890 -11508964 - AluSx SINE Alu -18 294 1 1577 234 107 117 chr2 239178890 239179627 -11508227 - L1ME LINE L1 -4995 1266 479 236 321 104 0 chr2 239179841 239179975 -11507879 - L1ME LINE L1 -5617 453 306 312 220 328 0 chr2 239180371 239180548 -11507306 - L2 LINE L2 -341 2973 2739 236 272 87 81 chr2 239181339 239181810 -11506044 - L1ME2 LINE L1 -169 5995 5507 21 0 0 0 chr2 239181876 239181897 -11505957 + AT_rich Low_complexity Low_complexity 1 21 0 261 246 108 0 chr2 239182012 239182077 -11505777 - L3 LINE CR1 -222 1355 1284 309 333 75 17 chr2 239182183 239182357 -11505497 - L3 LINE CR1 -847 730 547 711 266 25 28 chr2 239182368 239182595 -11505259 + MIR SINE MIR 1 228 -34 886 157 69 0 chr2 239184461 239184620 -11503234 + FAM SINE Alu 1 170 -5 2242 75 0 0 chr2 239185542 239185824 -11502030 - AluSg SINE Alu -8 302 21 23 0 0 0 chr2 239185865 239185888 -11501966 + AT_rich Low_complexity Low_complexity 1 23 0 1899 106 33 0 chr2 239185888 239186198 -11501656 + AluSp SINE Alu 1 319 0 705 180 16 0 chr2 239186215 239186337 -11501517 + FLAM_A SINE Alu 3 126 -7 1861 149 0 13 chr2 239186360 239186675 -11501179 + AluJb SINE Alu 1 311 -1 216 241 205 45 chr2 239187593 239187705 -11500149 + MIR3 SINE MIR 13 142 -66 314 319 119 38 chr2 239187774 239187984 -11499870 - L3 LINE CR1 -89 1488 1262 2612 134 73 15 chr2 239188698 239189175 -11498679 - L1MD1 LINE L1 -163 6473 5969 1969 131 3 6 chr2 239189190 239189502 -11498352 - AluSx SINE Alu -1 311 1 1439 188 60 45 chr2 239189502 239190223 -11497631 - L1MD1 LINE L1 -743 5797 5088 2223 82 0 22 chr2 239190223 239190539 -11497315 - AluY SINE Alu -2 309 1 1439 188 60 45 chr2 239190539 239190717 -11497137 - L1MD1 LINE L1 -1452 5088 4914 2193 104 7 0 chr2 239190717 239191026 -11496828 - AluSq SINE Alu -1 312 2 1439 188 60 45 chr2 239191026 239191370 -11496484 - L1MD1 LINE L1 -1626 4914 4538 703 285 85 0 chr2 239191379 239191625 -11496229 - L1M4 LINE L1 -1202 4944 4678 522 153 0 0 chr2 239191634 239191719 -11496135 - AluS SINE Alu 0 309 225 1530 203 249 78 chr2 239191720 239192362 -11495492 - L1MD1 LINE L1 -5593 947 196 1278 164 0 5 chr2 239192362 239192576 -11495278 + AluJb SINE Alu 86 298 -14 981 190 11 0 chr2 239192576 239192755 -11495099 - L1MD1 LINE L1 -6339 201 21 269 350 89 16 chr2 239193661 239193907 -11493947 - L2 LINE L2 -1072 2242 1979 492 273 107 47 chr2 239194560 239194813 -11493041 - L2 LINE L2 -412 2902 2635 838 258 146 27 chr2 239195622 239196025 -11491829 - MLT1C LTR MaLR -8 459 9 1390 179 4 11 chr2 239197213 239197475 -11490379 + AluJo SINE Alu 1 260 -52 222 183 33 0 chr2 239197482 239197542 -11490312 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 475 261 42 42 chr2 239197686 239197851 -11490003 - MIR SINE MIR -13 249 85 311 280 91 28 chr2 239198092 239198235 -11489619 - MER5A DNA MER1_type -15 174 23 189 0 0 0 chr2 239198689 239198710 -11489144 + (TA)n Simple_repeat Simple_repeat 2 22 0 1236 99 6 0 chr2 239198710 239198882 -11488972 - AluSg/x SINE Alu -6 304 132 1948 76 4 0 chr2 239198882 239199144 -11488710 - AluYa5 SINE Alu -6 305 43 363 193 149 44 chr2 239199498 239199612 -11488242 - MER69 DNA AcHobo -1 2525 2400 1937 118 7 26 chr2 239199640 239199945 -11487909 - AluSx SINE Alu -13 299 1 827 179 0 0 chr2 239199954 239200088 -11487766 - AluJb SINE Alu -8 304 171 534 211 66 13 chr2 239200088 239200240 -11487614 - MER69 DNA AcHobo -139 2387 2228 413 212 93 13 chr2 239200293 239200444 -11487410 - MER69 DNA AcHobo -290 2236 2074 2323 81 0 3 chr2 239200466 239200763 -11487091 + AluSg SINE Alu 1 296 -14 806 150 12 31 chr2 239200849 239201009 -11486845 - FRAM SINE Alu -9 167 11 263 159 23 212 chr2 239201024 239201076 -11486778 - MER69 DNA AcHobo -457 2069 2009 1803 133 29 4 chr2 239201076 239201354 -11486500 + AluSq SINE Alu 1 285 -28 263 159 23 212 chr2 239201354 239201375 -11486479 - MER69 DNA AcHobo -517 2009 2028 1635 225 141 6 chr2 239201375 239201851 -11486003 - MER34 LTR ERV1 0 542 3 263 159 23 212 chr2 239201851 239201908 -11485946 - MER69 DNA AcHobo -497 2029 1963 521 236 0 0 chr2 239201917 239202023 -11485831 - MER69 DNA AcHobo -2135 391 286 2064 92 3 3 chr2 239202023 239202335 -11485519 + AluSx SINE Alu 1 312 0 1474 164 51 4 chr2 239202341 239202615 -11485239 + AluJo SINE Alu 1 287 -25 386 291 79 26 chr2 239202806 239202995 -11484859 - MLT1J LTR MaLR -309 202 4 457 30 30 0 chr2 239203030 239203097 -11484757 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 362 253 0 0 chr2 239204079 239204166 -11483688 - MER69 DNA AcHobo -2316 210 124 2066 105 30 0 chr2 239204334 239204629 -11483225 - AluSp SINE Alu -7 306 3 757 237 14 30 chr2 239204824 239205043 -11482811 - L1MD2 LINE L1 -1 7807 6161 561 189 90 16 chr2 239205211 239205333 -11482521 + FLAM_A SINE Alu 1 131 -2 575 330 107 42 chr2 239205341 239206079 -11481775 - L1MC4a LINE L1 -758 5388 5122 181 282 64 39 chr2 239206665 239206743 -11481111 + MIR3 SINE MIR 99 178 -30 2131 100 3 3 chr2 239207660 239207960 -11479894 + AluY SINE Alu 1 300 -11 250 211 58 0 chr2 239208041 239208093 -11479761 - L1MC4 LINE L1 -122 7920 7866 25 31 0 0 chr2 239208365 239208397 -11479457 + AT_rich Low_complexity Low_complexity 1 32 0 265 276 79 55 chr2 239208712 239208839 -11479015 - L2 LINE L2 -10 3262 3133 369 351 44 17 chr2 239209009 239209434 -11478420 - L1MC4a LINE L1 -1167 4979 4535 2141 169 144 0 chr2 239209471 239209880 -11477974 + MLT1D LTR MaLR 7 474 -31 6924 121 16 11 chr2 239209886 239210919 -11476935 + L1MA2 LINE L1 5024 6068 -236 1987 127 3 3 chr2 239210919 239211211 -11476643 + AluSx SINE Alu 1 292 -20 6924 121 16 11 chr2 239211211 239211450 -11476404 + L1MA2 LINE L1 6068 6304 0 1978 117 3 0 chr2 239211462 239211745 -11476109 - AluSx SINE Alu -28 284 1 980 176 0 6 chr2 239211895 239212071 -11475783 + AluJb SINE Alu 137 311 -1 734 282 114 55 chr2 239212091 239212366 -11475488 + MLT1L LTR MaLR 85 342 -273 2413 59 16 0 chr2 239212366 239212672 -11475182 - AluY SINE Alu 0 311 1 734 282 114 55 chr2 239212672 239212885 -11474969 + MLT1L LTR MaLR 342 602 -13 520 271 151 54 chr2 239212892 239213242 -11474612 - L1ME4a LINE L1 -63 6058 5675 1596 166 24 10 chr2 239213388 239213683 -11474171 - AluJo SINE Alu -13 299 1 231 191 84 130 chr2 239213693 239213725 -11474129 + L1ME LINE L1 5612 5644 -477 1810 96 53 25 chr2 239213725 239213887 -11473967 - AluSx SINE Alu -19 293 118 189 0 111 0 chr2 239213887 239213923 -11473931 + T-rich Low_complexity Low_complexity 2 41 0 1810 96 53 25 chr2 239213923 239214041 -11473813 - AluSx SINE Alu -194 118 5 231 191 84 130 chr2 239214041 239214083 -11473771 + L1ME LINE L1 5644 5686 -435 694 102 17 0 chr2 239214083 239214201 -11473653 + (TAGA)n Simple_repeat Simple_repeat 3 122 0 231 191 84 130 chr2 239214201 239214256 -11473598 + L1ME LINE L1 5686 5736 -385 624 178 0 17 chr2 239214287 239214405 -11473449 + AluSg/x SINE Alu 84 199 -113 270 244 181 89 chr2 239214423 239214615 -11473239 + MLT1L LTR MaLR 166 392 -223 2246 66 17 0 chr2 239214615 239214903 -11472951 - AluY SINE Alu -18 293 1 270 244 181 89 chr2 239214903 239214980 -11472874 + MLT1L LTR MaLR 392 460 -155 324 0 0 0 chr2 239215402 239215438 -11472416 + (CA)n Simple_repeat Simple_repeat 2 37 0 696 143 56 32 chr2 239215575 239215701 -11472153 + FLAM_C SINE Alu 5 133 0 2493 98 0 0 chr2 239215798 239216103 -11471751 - AluSx SINE Alu -7 305 1 2015 159 0 3 chr2 239216479 239216780 -11471074 + AluJb SINE Alu 1 300 -12 1637 150 44 11 chr2 239218981 239219293 -11468561 - AluJo SINE Alu 0 321 1 288 0 0 0 chr2 239219773 239219805 -11468049 + (ATTG)n Simple_repeat Simple_repeat 1 32 0 702 96 0 10 chr2 239219805 239219909 -11467945 - FLAM_C SINE Alu -25 118 16 2420 95 0 3 chr2 239220505 239220809 -11467045 - AluSx SINE Alu -9 303 1 348 188 0 0 chr2 239221759 239221823 -11466031 + MER53 DNA DNA 2 65 -124 950 94 0 0 chr2 239222744 239222907 -11464947 + FLAM_C SINE Alu 5 167 0 2550 62 3 3 chr2 239225024 239225329 -11462525 + AluSc SINE Alu 2 306 -3 2348 99 0 3 chr2 239225947 239226240 -11461614 + AluSx SINE Alu 15 306 -6 1011 66 0 0 chr2 239227215 239227336 -11460518 - AluSg/x SINE Alu -11 301 181 1876 192 75 5 chr2 239227446 239227832 -11460022 - MLT2D LTR ERVL 0 414 2 773 165 0 8 chr2 239227833 239227966 -11459888 + FLAM_C SINE Alu 1 132 -1 1976 97 17 40 chr2 239227978 239228113 -11459741 + AluSg SINE Alu 1 138 -172 180 0 0 0 chr2 239228113 239228133 -11459721 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1976 97 17 40 chr2 239228133 239228295 -11459559 + AluSg SINE Alu 138 291 -19 1857 120 28 77 chr2 239228525 239228851 -11459003 + AluSx SINE Alu 1 310 -2 900 163 67 6 chr2 239229235 239229413 -11458441 + MER20 DNA MER1_type 31 219 0 2361 81 3 14 chr2 239229747 239230043 -11457811 - AluSc SINE Alu -16 293 1 301 305 0 0 chr2 239230135 239230217 -11457637 + MIR SINE MIR 49 130 -78 2279 53 38 0 chr2 239230325 239230589 -11457265 - AluY SINE Alu -21 290 17 531 289 125 51 chr2 239232194 239232506 -11455348 + L3 LINE CR1 932 1266 -311 2120 125 73 14 chr2 239232508 239232852 -11455002 + THE1B LTR MaLR 1 364 0 398 135 67 11 chr2 239232864 239232953 -11454901 - MER53 DNA DNA 0 189 96 * 410 137 53 11 chr2 239232876 239232971 -11454883 + MER53 DNA DNA 23 121 -68 227 108 27 0 chr2 239232956 239232993 -11454861 - MER53 DNA DNA -150 39 2 * 416 264 128 0 chr2 239233011 239233159 -11454695 + L3 LINE CR1 1339 1505 -72 486 289 102 22 chr2 239233214 239233439 -11454415 - MIR SINE MIR -6 256 14 3396 148 53 56 chr2 239234089 239234820 -11453034 + L1MB7 LINE L1 5456 6184 0 370 301 44 0 chr2 239235301 239235414 -11452440 + MIR SINE MIR 93 210 -52 355 304 26 9 chr2 239237699 239237814 -11450040 + MIR SINE MIR 122 238 -24 952 241 82 28 chr2 239238778 239239168 -11448686 - LTR16A1 LTR ERVL -15 442 32 218 290 0 0 chr2 239239244 239239306 -11448548 + MIR SINE MIR 148 209 -53 337 170 10 10 chr2 239239644 239239722 -11448132 + MIR SINE MIR 116 192 -70 371 277 98 33 chr2 239239797 239239981 -11447873 + MIR SINE MIR 31 226 -36 712 304 21 12 chr2 239240062 239240305 -11447549 + MIR SINE MIR 2 246 -16 269 182 0 15 chr2 239240311 239240377 -11447477 + (CCA)n Simple_repeat Simple_repeat 1 65 0 225 175 0 0 chr2 239240447 239240487 -11447367 + (CAT)n Simple_repeat Simple_repeat 3 42 0 1315 198 6 107 chr2 239240573 239240911 -11446943 + AluSp SINE Alu 1 304 -9 2436 86 0 10 chr2 239240911 239241225 -11446629 + AluY SINE Alu 1 311 0 1054 174 0 0 chr2 239242555 239242722 -11445132 + FRAM SINE Alu 1 167 -9 413 267 86 63 chr2 239242730 239242951 -11444903 - LTR16C LTR ERVL -112 379 154 252 329 44 22 chr2 239243411 239243548 -11444306 - MLT1K LTR MaLR -10 578 439 536 346 23 9 chr2 239243677 239243894 -11443960 - MLT1K LTR MaLR -358 230 11 381 239 145 0 chr2 239244105 239244222 -11443632 + MER20B DNA MER1_type 46 179 -604 3273 125 90 7 chr2 239244807 239245409 -11442445 - MER39B LTR ERV1 0 653 2 1759 133 54 70 chr2 239245477 239245792 -11442062 + AluJb SINE Alu 1 310 -2 1907 106 102 0 chr2 239245820 239246094 -11441760 - AluSx SINE Alu -10 302 1 852 233 79 32 chr2 239247570 239247849 -11440005 + L2 LINE L2 1062 1353 -1961 1014 237 7 48 chr2 239247878 239248173 -11439681 - L1ME2 LINE L1 -152 6012 5730 1941 113 4 11 chr2 239248173 239248439 -11439415 - AluSp SINE Alu -7 306 43 412 100 75 38 chr2 239248542 239248622 -11439232 - AluJ/FRAM SINE Alu -10 302 220 822 273 98 77 chr2 239248681 239249224 -11438630 + MER41C LTR ERV1 1 554 0 809 141 97 119 chr2 239249888 239250073 -11437781 - AluSq SINE Alu -132 181 1 1614 156 53 53 chr2 239251097 239251398 -11436456 + AluSg SINE Alu 1 301 -9 326 287 37 22 chr2 239251832 239251968 -11435886 - MLT1K LTR MaLR -2 586 449 906 134 28 126 chr2 239252362 239252616 -11435238 + LTR49 LTR ERV1 5 233 -362 2326 102 0 0 chr2 239252619 239252912 -11434942 - AluSx SINE Alu -15 297 5 530 225 143 67 chr2 239252999 239253314 -11434540 + LTR49 LTR ERV1 243 581 -14 1951 95 4 19 chr2 239253375 239253637 -11434217 - AluSx SINE Alu -13 299 42 2508 77 0 10 chr2 239253650 239253961 -11433893 - AluY SINE Alu -3 308 1 355 280 9 75 chr2 239253971 239254022 -11433832 - L1ME LINE L1 -346 5775 5733 2548 54 0 3 chr2 239254022 239254316 -11433538 - AluY SINE Alu -18 293 1 355 280 9 75 chr2 239254316 239254371 -11433483 - L1ME LINE L1 -388 5733 5676 2351 197 48 44 chr2 239254509 239255149 -11432705 + LTR48B LTR ERV1 1 643 -1 608 130 0 0 chr2 239255193 239255285 -11432569 - AluSg/x SINE Alu -9 300 209 448 257 93 76 chr2 239255559 239255796 -11432058 + LTR16A LTR ERVL 17 257 -193 588 259 66 30 chr2 239255810 239256007 -11431847 - MLT1H1 LTR MaLR 0 555 352 317 283 57 0 chr2 239256597 239256703 -11431151 - L1MEc LINE L1 -3129 3086 2975 1882 155 0 10 chr2 239256706 239256996 -11430858 - AluJo SINE Alu -25 287 1 1676 155 17 21 chr2 239257009 239257300 -11430554 - AluJb SINE Alu -22 290 1 1048 142 0 0 chr2 239257371 239257526 -11430328 + AluJb SINE Alu 158 312 0 580 193 5 127 chr2 239257534 239257731 -11430123 - L1MEc LINE L1 -3267 2948 2776 496 233 52 52 chr2 239257761 239257811 -11430043 - L1MEc LINE L1 -4078 2318 2269 2523 71 0 0 chr2 239257811 239258108 -11429746 + AluY SINE Alu 1 297 -14 496 233 52 52 chr2 239258108 239258345 -11429509 - L1MEc LINE L1 -4126 2270 2031 1967 129 11 0 chr2 239258661 239258940 -11428914 + AluSx SINE Alu 1 282 -30 373 300 95 21 chr2 239259165 239259408 -11428446 + L1ME4a LINE L1 5656 5916 -205 225 224 12 94 chr2 239259475 239259560 -11428294 + L2 LINE L2 3228 3305 -8 2325 122 0 3 chr2 239259983 239260294 -11427560 + AluSx SINE Alu 1 310 -2 1919 152 0 0 chr2 239260472 239260755 -11427099 - AluSc SINE Alu -26 283 1 2113 218 48 108 chr2 239261538 239261910 -11425944 + MER21B LTR ERV1 1 394 -469 2080 157 7 0 chr2 239261910 239262210 -11425644 + AluSx SINE Alu 1 302 -10 2113 218 48 108 chr2 239262210 239262704 -11425150 + MER21B LTR ERV1 394 815 -48 2308 96 0 0 chr2 239263141 239263446 -11424408 + AluSx SINE Alu 1 305 0 328 376 8 0 chr2 239263655 239263772 -11424082 + LTR67 LTR ERVL 98 215 -342 455 315 42 9 chr2 239263941 239264154 -11423700 + HERVL LTR ERVL 1780 1999 -3655 729 300 34 71 chr2 239264176 239264434 -11423420 + HERVL LTR ERVL 2107 2350 -3414 192 40 0 0 chr2 239264434 239264459 -11423395 + (TG)n Simple_repeat Simple_repeat 1 25 0 729 300 34 71 chr2 239264459 239264553 -11423301 + HERVL LTR ERVL 2350 2446 -3318 348 217 0 0 chr2 239265037 239265106 -11422748 - L1ME3A LINE L1 -38 6132 6064 2253 113 0 0 chr2 239265185 239265509 -11422345 - AluSx SINE Alu 0 324 1 29 0 0 0 chr2 239265699 239265728 -11422126 + AT_rich Low_complexity Low_complexity 1 29 0 618 256 144 30 chr2 239265897 239266225 -11421629 - MLT1L LTR MaLR -221 394 1 381 254 48 79 chr2 239266321 239266510 -11421344 + MER3 DNA MER1_type 27 209 0 * 1188 151 5 29 chr2 239266343 239266548 -11421306 - MER3 DNA MER1_type 0 209 10 1021 79 0 7 chr2 239267793 239267933 -11419921 - MER85 DNA T2_type 0 139 1 210 209 12 35 chr2 239268351 239268437 -11419417 + GA-rich Low_complexity Low_complexity 2 85 0 1689 159 9 54 chr2 239268533 239268848 -11419006 - AluJb SINE Alu -6 306 6 21 0 0 0 chr2 239269033 239269054 -11418800 + AT_rich Low_complexity Low_complexity 1 21 0 2133 128 10 0 chr2 239269535 239269833 -11418021 - AluSx SINE Alu -11 301 1 345 291 70 97 chr2 239270045 239270272 -11417582 + MLT1J LTR MaLR 230 450 -61 2267 107 3 16 chr2 239270368 239270685 -11417169 - AluSp SINE Alu 0 313 1 538 183 131 33 chr2 239271337 239271490 -11416364 - MER3 DNA MER1_type -41 168 1 228 219 27 41 chr2 239271893 239271966 -11415888 + L2 LINE L2 3200 3271 -1 25 95 0 0 chr2 239272168 239272242 -11415612 + GC_rich Low_complexity Low_complexity 1 74 0 220 188 14 43 chr2 239272419 239272488 -11415366 + (CGGGG)n Simple_repeat Simple_repeat 4 70 0 206 125 21 0 chr2 239272493 239272541 -11415313 + (CGG)n Simple_repeat Simple_repeat 2 50 0 28 0 0 0 chr2 239272633 239272661 -11415193 + GC_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 239272871 239272901 -11414953 + GC_rich Low_complexity Low_complexity 1 30 0 2216 48 7 0 chr2 239273723 239273996 -11413858 + L1PA4 LINE L1 5881 6155 0 2133 127 3 0 chr2 239274409 239274700 -11413154 - AluSq SINE Alu -17 296 5 262 219 73 88 chr2 239274705 239274842 -11413012 + L2 LINE L2 2925 3059 -213 30 0 0 0 chr2 239275512 239275542 -11412312 + AT_rich Low_complexity Low_complexity 1 30 0 249 218 0 0 chr2 239275709 239275764 -11412090 + MIR SINE MIR 152 206 -56 208 147 0 0 chr2 239276164 239276198 -11411656 - MIR SINE MIR -7 255 222 1007 146 195 22 chr2 239276929 239277193 -11410661 - Tigger7 DNA MER2_type -7 2480 3 2124 124 3 0 chr2 239277384 239277689 -11410165 + AluSq SINE Alu 1 306 0 480 219 102 70 chr2 239277721 239278036 -11409818 - MLT1E LTR MaLR -255 371 3 227 198 9 85 chr2 239278041 239278147 -11409707 - L1ME4a LINE L1 -39 6082 5985 5657 108 22 35 chr2 239278490 239279023 -11408831 - Tigger3b DNA MER2_type -1797 1231 712 711 214 14 0 chr2 239279023 239279191 -11408663 + FRAM SINE Alu 1 170 0 5657 108 22 35 chr2 239279191 239279560 -11408294 - Tigger3b DNA MER2_type -2316 712 340 269 156 0 16 chr2 239279560 239279624 -11408230 + (TA)n Simple_repeat Simple_repeat 1 63 0 1551 160 5 111 chr2 239279639 239279684 -11408170 - Tigger3b DNA MER2_type -2700 329 281 1965 77 0 4 chr2 239279684 239279930 -11407924 + AluSx SINE Alu 44 288 -24 1551 160 5 111 chr2 239279930 239280171 -11407683 - Tigger3b DNA MER2_type -2748 281 88 2508 62 3 7 chr2 239280171 239280478 -11407376 - AluY SINE Alu -5 306 1 1551 160 5 111 chr2 239280478 239280558 -11407296 - Tigger3b DNA MER2_type -2941 88 1 302 177 32 0 chr2 239280641 239280703 -11407151 - L1MD1 LINE L1 -12 6230 6167 616 146 0 0 chr2 239280703 239280799 -11407055 + FLAM_C SINE Alu 33 128 -15 891 150 0 0 chr2 239280810 239280943 -11406911 - L1MD2 LINE L1 -66 6293 6161 432 0 0 0 chr2 239280952 239281000 -11406854 + (TG)n Simple_repeat Simple_repeat 2 49 0 272 205 53 0 chr2 239281020 239281094 -11406760 - L1ME4a LINE L1 -296 5825 5743 678 255 82 17 chr2 239281101 239281332 -11406522 - MLT1L LTR MaLR -11 604 359 505 169 0 0 chr2 239281338 239281427 -11406427 - L1ME4a LINE L1 -451 5670 5582 379 222 189 25 chr2 239282166 239282354 -11405500 + MER20B DNA MER1_type 1 219 0 249 200 0 46 chr2 239283659 239283724 -11404130 + Charlie8 DNA MER1_type 72 133 -2284 872 116 0 0 chr2 239284577 239284689 -11403165 - FLAM_C SINE Alu -19 124 13 1394 180 113 3 chr2 239286152 239286496 -11401358 - MER3 DNA MER1_type 0 2624 2243 683 140 44 0 chr2 239286507 239286621 -11401233 - MER3 DNA MER1_type -41 168 50 2303 91 3 0 chr2 239286638 239286935 -11400919 + AluSx SINE Alu 1 298 -14 360 326 115 16 chr2 239288080 239288384 -11399470 - L2 LINE L2 -6 3266 2933 607 198 148 0 chr2 239289381 239289543 -11398311 + Charlie8 DNA MER1_type 59 244 -2173 2363 77 10 7 chr2 239289561 239289860 -11397994 - AluSx SINE Alu -12 300 1 2219 101 7 3 chr2 239290071 239290367 -11397487 + AluSc SINE Alu 1 297 -12 26 0 0 0 chr2 239290469 239290495 -11397359 + AT_rich Low_complexity Low_complexity 1 26 0 298 281 244 12 chr2 239292609 239292855 -11394999 + L3 LINE CR1 1114 1416 -161 595 301 166 15 chr2 239292919 239293096 -11394758 + L2 LINE L2 2575 2724 -589 1214 98 21 36 chr2 239293096 239293289 -11394565 - MER30B DNA MER1_type 0 190 1 595 301 166 15 chr2 239293289 239293566 -11394288 + L2 LINE L2 2724 3091 -222 497 236 71 46 chr2 239294203 239294483 -11393371 - HAL1 LINE L1 0 2507 2221 718 166 204 0 chr2 239295536 239295693 -11392161 - MER5A DNA MER1_type 0 189 1 1864 169 3 25 chr2 239296206 239296520 -11391334 - AluJb SINE Alu 0 312 6 263 277 125 0 chr2 239297634 239297746 -11390108 - MIR SINE MIR -15 247 122 762 162 0 44 chr2 239298484 239298620 -11389234 - FLAM_C SINE Alu -3 130 1 1808 161 28 0 chr2 239299317 239299608 -11388246 - AluSx SINE Alu -4 308 10 2575 35 6 22 chr2 239299941 239300254 -11387600 - AluY SINE Alu -3 308 1 1725 154 92 7 chr2 239300562 239300854 -11387000 + MER7A DNA MER2_type 32 346 0 244 266 47 0 chr2 239300868 239300932 -11386922 - MARNA DNA Mariner -135 451 385 634 207 0 0 chr2 239301217 239301333 -11386521 - FLAM_A SINE Alu -17 116 1 345 293 90 0 chr2 239301337 239301470 -11386384 + MARNA DNA Mariner 427 571 -15 2243 134 0 0 chr2 239302305 239302612 -11385242 - AluSx SINE Alu -5 307 1 411 259 61 30 chr2 239302822 239302953 -11384901 + L2 LINE L2 3138 3272 0 371 191 0 0 chr2 239303054 239303122 -11384732 - L2 LINE L2 -1 3312 3245 3004 176 31 8 chr2 239303129 239303640 -11384214 + Tigger7 DNA MER2_type 6 528 -1959 467 228 0 11 chr2 239303632 239303724 -11384130 + Tigger7 DNA MER2_type 2496 2586 -1 * 182 263 60 60 chr2 239303724 239303857 -11383997 - L2 LINE L2 -69 3244 3112 535 271 51 14 chr2 239303857 239304071 -11383783 + MER112 DNA MER1_type 32 253 -7 236 353 0 0 chr2 239304827 239304912 -11382942 + (CATTA)n Simple_repeat Simple_repeat 2 86 0 207 178 78 89 chr2 239304919 239305009 -11382845 - MIR SINE MIR -54 208 120 24 77 0 0 chr2 239305926 239305978 -11381876 + AT_rich Low_complexity Low_complexity 1 52 0 2549 131 13 0 chr2 239307643 239308016 -11379838 - Tigger1 DNA MER2_type -1948 470 93 1552 209 104 73 chr2 239308043 239308756 -11379098 - L1M4 LINE L1 -1351 4795 4061 2081 130 0 7 chr2 239308761 239309061 -11378793 - AluSx SINE Alu -14 298 1 1118 168 0 16 chr2 239309516 239309701 -11378153 - AluJo SINE Alu -44 268 87 1848 163 3 13 chr2 239310237 239310538 -11377316 - AluJb SINE Alu -14 298 1 1999 128 46 0 chr2 239311040 239311321 -11376533 + AluSx SINE Alu 1 294 -18 26 0 0 0 chr2 239311456 239311482 -11376372 + AT_rich Low_complexity Low_complexity 1 26 0 440 141 13 13 chr2 239312124 239312202 -11375652 + MER51A LTR ERV1 470 547 -87 23 68 0 0 chr2 239312352 239312396 -11375458 + AT_rich Low_complexity Low_complexity 1 44 0 2292 112 0 0 chr2 239312641 239312944 -11374910 + AluSx SINE Alu 1 303 -9 2343 107 10 0 chr2 239313441 239313750 -11374104 - AluSx SINE Alu 0 312 1 25 31 0 0 chr2 239313952 239313984 -11373870 + AT_rich Low_complexity Low_complexity 1 32 0 343 230 58 11 chr2 239315206 239315293 -11372561 - MIR3 SINE MIR -10 198 108 2401 75 0 7 chr2 239315516 239315822 -11372032 + AluSq SINE Alu 1 304 -9 216 0 0 0 chr2 239315960 239315984 -11371870 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 293 233 153 98 chr2 239316246 239316409 -11371445 - MLT1K LTR MaLR -415 173 2 252 325 104 9 chr2 239316497 239316709 -11371145 + L2 LINE L2 1612 1843 -1471 1764 162 3 10 chr2 239316730 239317020 -11370834 - AluJo SINE Alu -24 288 1 2147 109 0 3 chr2 239317077 239317370 -11370484 + AluSq SINE Alu 1 292 -21 2021 131 0 10 chr2 239318722 239319012 -11368842 + AluSx SINE Alu 1 287 -25 523 210 261 0 chr2 239320167 239320286 -11367568 + FRAM SINE Alu 4 153 -13 32 0 0 0 chr2 239320593 239320625 -11367229 + AT_rich Low_complexity Low_complexity 1 32 0 1894 156 0 32 chr2 239320686 239321000 -11366854 - AluJo SINE Alu -8 304 1 1988 151 0 0 chr2 239321030 239321334 -11366520 + AluSx SINE Alu 1 304 -8 864 130 0 8 chr2 239321450 239321581 -11366273 + FLAM_C SINE Alu 1 130 -3 270 106 0 21 chr2 239321619 239321666 -11366188 - L1MA9 LINE L1 -38 6274 6229 2308 87 0 7 chr2 239322336 239322634 -11365220 + AluSg SINE Alu 1 296 -14 878 258 14 0 chr2 239322639 239322848 -11365006 + MIR SINE MIR 30 241 -21 264 268 0 0 chr2 239322854 239322925 -11364929 + (TAG)n Simple_repeat Simple_repeat 3 73 0 11899 120 27 14 chr2 239322994 239324210 -11363644 + Tigger1 DNA MER2_type 1 1200 -1218 2944 85 62 9 chr2 239324210 239324250 -11363604 - MLT2A1 LTR ERVL 0 444 408 180 0 0 0 chr2 239324250 239324270 -11363584 + (TA)n Simple_repeat Simple_repeat 2 21 0 2944 85 62 9 chr2 239324270 239324651 -11363203 - MLT2A1 LTR ERVL -36 408 1 11899 120 27 14 chr2 239324651 239324916 -11362938 + Tigger1 DNA MER2_type 1200 1460 -958 2133 108 3 53 chr2 239324916 239325239 -11362615 + AluSx SINE Alu 1 307 -5 11899 120 27 14 chr2 239325239 239325617 -11362237 + Tigger1 DNA MER2_type 1460 1885 -533 2169 165 109 11 chr2 239325657 239326117 -11361737 - LTR22 LTR ERVK -4 505 1 12340 94 7 2 chr2 239326121 239327777 -11360077 - HERVK22 LTR ERVK -1 6836 5173 * 21911 78 9 14 chr2 239327775 239330727 -11357127 - HERVK22 LTR ERVK -1587 5250 2314 3627 112 0 0 chr2 239330730 239331230 -11356624 - HERVK22 LTR ERVK -6065 772 273 1807 155 105 31 chr2 239331230 239331663 -11356191 - LTR10A LTR ERV1 0 609 97 4468 236 20 15 chr2 239331707 239332762 -11355092 - HERVI LTR ERV1 -1 7784 6725 2622 92 18 40 chr2 239332760 239333289 -11354565 - HERVI LTR ERV1 -5559 1337 703 * 4818 214 40 19 chr2 239333332 239334463 -11353391 - HERVI LTR ERV1 -5923 726 487 1017 196 48 55 chr2 239334533 239334824 -11353030 - HERVI LTR ERV1 -6360 289 1 1735 228 91 31 chr2 239334833 239335350 -11352504 - LTR10A LTR ERV1 -61 548 1 1919 61 53 4 chr2 239335350 239335613 -11352241 - HERVK22 LTR ERVK -6561 276 1 2038 180 62 12 chr2 239335613 239336079 -11351775 - LTR22 LTR ERVK 0 458 1 1937 169 20 3 chr2 239336122 239336470 -11351384 + Tigger1 DNA MER2_type 1871 2224 -194 1065 204 53 45 chr2 239336500 239336765 -11351089 - AluJo SINE Alu -35 277 11 1167 136 16 0 chr2 239336782 239336966 -11350888 + Tigger1 DNA MER2_type 2227 2413 -5 2563 135 44 25 chr2 239336991 239337422 -11350432 - Tigger2 DNA MER2_type 0 2718 2280 354 227 0 0 chr2 239337420 239337486 -11350368 + MER8 DNA MER2_type 170 235 -4 * 344 392 130 21 chr2 239337807 239338414 -11349440 - L3 LINE CR1 -904 673 1 29 28 0 0 chr2 239339129 239339165 -11348689 + AT_rich Low_complexity Low_complexity 1 36 0 203 302 0 0 chr2 239339281 239339344 -11348510 - MIR SINE MIR -122 140 78 1946 151 3 0 chr2 239340993 239341292 -11346562 + AluSx SINE Alu 1 300 -12 266 291 0 47 chr2 239342198 239342284 -11345570 - MIR SINE MIR -125 137 56 2011 130 0 10 chr2 239344693 239344985 -11342869 + AluSx SINE Alu 3 291 -21 984 203 31 22 chr2 239345366 239345588 -11342266 + MER58A DNA MER1_type 1 224 0 193 292 156 10 chr2 239346549 239346645 -11341209 + L2 LINE L2 3204 3313 0 2011 146 3 0 chr2 239347544 239347846 -11340008 + AluJb SINE Alu 7 309 -3 24 0 0 0 chr2 239348930 239348954 -11338900 + AT_rich Low_complexity Low_complexity 1 24 0 203 293 0 61 chr2 239349006 239349088 -11338766 + MIR SINE MIR 18 94 -114 240 182 200 0 chr2 239350290 239350345 -11337509 - MIR3 SINE MIR -24 184 119 492 233 164 25 chr2 239350435 239350594 -11337260 + MER5A DNA MER1_type 9 189 0 945 225 52 40 chr2 239352653 239352902 -11334952 + MIR SINE MIR 11 262 0 216 269 140 21 chr2 239354084 239354177 -11333677 - MIR SINE MIR -156 106 3 2206 120 3 0 chr2 239354245 239354545 -11333309 + AluSx SINE Alu 1 301 -11 1849 103 12 0 chr2 239354699 239354951 -11332903 - AluSx SINE Alu -57 255 1 691 215 0 15 chr2 239355946 239356081 -11331773 + FLAM_A SINE Alu 1 133 0 1425 143 12 128 chr2 239360820 239361156 -11326698 + AluJb SINE Alu 1 297 -5 29 28 0 0 chr2 239361332 239361368 -11326486 + AT_rich Low_complexity Low_complexity 1 36 0 31 0 0 0 chr2 239361581 239361612 -11326242 + AT_rich Low_complexity Low_complexity 1 31 0 246 156 0 0 chr2 239361716 239361761 -11326093 + (CA)n Simple_repeat Simple_repeat 2 46 0 201 158 0 0 chr2 239361956 239361994 -11325860 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2291 104 3 0 chr2 239362042 239362349 -11325505 - AluSx SINE Alu 0 312 5 310 409 101 0 chr2 239362887 239363036 -11324818 - L2 LINE L2 -18 3254 3091 283 297 124 11 chr2 239363426 239363611 -11324243 - L1M4 LINE L1 -6278 264 59 1700 120 8 4 chr2 239364558 239364808 -11323046 - AluSx SINE Alu -17 295 45 1564 174 47 14 chr2 239365164 239365461 -11322393 - AluJo SINE Alu 0 306 1 686 217 176 28 chr2 239365744 239366062 -11321792 - L1MC5 LINE L1 -466 7495 7131 2853 7 0 0 chr2 239366181 239366491 -11321363 + AluYa5 SINE Alu 2 311 0 449 297 68 8 chr2 239367343 239367461 -11320393 - MIR SINE MIR -67 141 17 922 114 0 0 chr2 239367898 239368021 -11319833 - AluJb SINE Alu -126 186 64 710 216 12 42 chr2 239368164 239368331 -11319523 + U1 snRNA snRNA 4 165 0 22 0 0 0 chr2 239369942 239369964 -11317890 + AT_rich Low_complexity Low_complexity 1 22 0 366 295 59 62 chr2 239370053 239370228 -11317626 - MIR3 SINE MIR -14 194 19 286 370 0 29 chr2 239370364 239370478 -11317376 - MIR3 SINE MIR -102 106 5 22 35 0 0 chr2 239370805 239370834 -11317020 + AT_rich Low_complexity Low_complexity 1 29 0 434 290 35 0 chr2 239371009 239371154 -11316700 - Charlie8 DNA MER1_type -2261 156 7 217 321 97 38 chr2 239371266 239371549 -11316305 + L2 LINE L2 2753 3054 -218 503 100 65 12 chr2 239371626 239371796 -11316058 + (TA)n Simple_repeat Simple_repeat 1 179 0 2055 130 10 0 chr2 239371811 239372111 -11315743 - AluSx SINE Alu -6 306 4 2097 115 43 11 chr2 239372236 239372585 -11315269 - L1PA16 LINE L1 -1 6165 5806 725 197 15 61 chr2 239372593 239372791 -11315063 - L1ME3A LINE L1 -7 6163 5975 350 169 0 0 chr2 239373829 239373894 -11313960 - Alu SINE Alu 0 300 236 861 65 0 0 chr2 239373895 239374003 -11313851 - AluSq/x SINE Alu -205 108 1 337 164 82 0 chr2 239374022 239374095 -11313759 - AluJo SINE Alu 0 302 224 1069 139 0 0 chr2 239374095 239374246 -11313608 - AluJo SINE Alu -161 151 1 219 167 0 0 chr2 239374258 239374300 -11313554 + A-rich Low_complexity Low_complexity 1 42 0 2284 109 0 7 chr2 239374913 239375215 -11312639 + AluSg SINE Alu 1 300 -10 2035 138 0 0 chr2 239375295 239375586 -11312268 + AluSq SINE Alu 1 291 -22 1051 122 0 0 chr2 239375586 239375725 -11312129 + AluSq/x SINE Alu 1 139 -173 2000 113 31 3 chr2 239375726 239376019 -11311835 + AluSq SINE Alu 2 302 -11 1077 161 62 43 chr2 239376121 239376332 -11311522 - AluJo SINE Alu -11 301 87 322 229 238 0 chr2 239376332 239376437 -11311417 + L2 LINE L2 3114 3243 -70 2396 100 0 0 chr2 239376541 239376882 -11310972 - AluSx SINE Alu 0 341 1 540 0 0 0 chr2 239377887 239377947 -11309907 + (GTTTG)n Simple_repeat Simple_repeat 2 61 0 2269 75 0 0 chr2 239377948 239378227 -11309627 - AluSg SINE Alu -31 279 1 1023 170 119 92 chr2 239378784 239378942 -11308912 - AluSx SINE Alu 0 302 131 1945 116 0 81 chr2 239378942 239379277 -11308577 - AluSq SINE Alu -5 308 1 1023 170 119 92 chr2 239379277 239379412 -11308442 - AluSx SINE Alu -171 131 1 410 285 122 47 chr2 239379434 239379648 -11308206 + MIR SINE MIR 26 255 -7 2541 131 220 7 chr2 239379850 239380310 -11307544 - Tigger3(Golem) DNA MER2_type -1 3028 2667 2221 116 3 3 chr2 239380310 239380621 -11307233 + AluSq SINE Alu 1 311 -2 2541 131 220 7 chr2 239380621 239380779 -11307075 - Tigger3(Golem) DNA MER2_type -362 2667 2278 468 210 50 10 chr2 239380773 239380873 -11306981 - Tigger3(Golem) DNA MER2_type -2924 105 2 * 1817 153 7 17 chr2 239381909 239382210 -11305644 + AluJb SINE Alu 1 298 -14 518 176 0 0 chr2 239384094 239384185 -11303669 + FLAM_A SINE Alu 44 134 -8 348 187 0 0 chr2 239384754 239384760 -11303094 + (TA)n Simple_repeat Simple_repeat 2 7 -85 2052 116 10 10 chr2 239384760 239385061 -11302793 + AluSg SINE Alu 1 301 -9 348 187 0 0 chr2 239385061 239385145 -11302709 + (TA)n Simple_repeat Simple_repeat 6 92 0 685 234 138 46 chr2 239385157 239385461 -11302393 + MER46C DNA MER2_type 4 335 -3 245 350 45 83 chr2 239385913 239386070 -11301784 + MIR3 SINE MIR 37 187 -21 2288 99 0 13 chr2 239386499 239386812 -11301042 - AluSq SINE Alu -4 309 1 395 199 118 52 chr2 239387128 239387264 -11300590 - MIR SINE MIR -61 201 57 26 74 0 0 chr2 239387587 239387641 -11300213 + AT_rich Low_complexity Low_complexity 1 54 0 2365 98 3 0 chr2 239388528 239388834 -11299020 + AluSp SINE Alu 1 307 -6 2087 97 0 8 chr2 239388846 239389114 -11298740 + AluSx SINE Alu 1 266 -46 1092 233 49 10 chr2 239389162 239389450 -11298404 - AluJb SINE Alu 0 302 4 2091 143 3 0 chr2 239389664 239389964 -11297890 + AluSx SINE Alu 1 301 -11 236 231 0 19 chr2 239391040 239391092 -11296762 + MER102a DNA MER1_type 219 269 -61 411 236 24 55 chr2 239391134 239391261 -11296593 + MER102a DNA MER1_type 207 329 -1 2115 121 30 15 chr2 239391384 239391716 -11296138 - MER1B DNA MER1_type 0 337 1 322 272 54 11 chr2 239391873 239391965 -11295889 - MIR3 SINE MIR -49 159 64 22 0 0 0 chr2 239392141 239392163 -11295691 + AT_rich Low_complexity Low_complexity 1 22 0 1655 146 6 95 chr2 239392564 239392900 -11294954 + AluJb SINE Alu 3 308 -4 201 357 0 14 chr2 239393522 239393592 -11294262 - L2 LINE L2 -665 2649 2581 1244 145 0 11 chr2 239394306 239394492 -11293362 + AluSg/x SINE Alu 129 312 0 2130 66 0 15 chr2 239394492 239394765 -11293089 + AluY SINE Alu 42 310 -1 437 279 68 58 chr2 239395624 239396004 -11291850 - L1MC4a LINE L1 -1901 5907 5524 576 29 0 0 chr2 239396660 239396730 -11291124 + (TA)n Simple_repeat Simple_repeat 1 70 0 230 283 0 0 chr2 239396865 239396918 -11290936 + GA-rich Low_complexity Low_complexity 5 57 0 228 311 0 92 chr2 239397121 239397240 -11290614 - L2 LINE L2 -216 3056 2949 22 0 0 0 chr2 239397483 239397505 -11290349 + AT_rich Low_complexity Low_complexity 1 22 0 539 318 138 0 chr2 239397909 239398126 -11289728 + MIR SINE MIR 15 261 -1 722 239 99 0 chr2 239398534 239398735 -11289119 + MIR SINE MIR 1 221 -41 785 208 12 6 chr2 239399185 239399353 -11288501 + L1MB7 LINE L1 762 930 -5612 * 3720 174 64 29 chr2 239399334 239399571 -11288283 + L1MB7 LINE L1 5697 5924 -758 917 205 0 18 chr2 239399571 239399742 -11288112 + FAM SINE Alu 3 170 -5 3720 174 64 29 chr2 239399742 239400438 -11287416 + L1MB7 LINE L1 5924 6661 -21 527 186 228 0 chr2 239401713 239401858 -11285996 - MER5A DNA MER1_type -3 186 9 200 214 24 0 chr2 239402577 239402619 -11285235 + MER5C DNA MER1_type 34 76 -248 243 258 76 15 chr2 239402737 239402803 -11285051 - MER5C DNA MER1_type -252 72 3 2335 85 3 3 chr2 239403184 239403490 -11284364 - AluSp SINE Alu -7 306 1 1206 152 0 61 chr2 239404653 239404716 -11283138 + AluJb SINE Alu 84 149 -163 1741 173 3 7 chr2 239404716 239405011 -11282843 + AluJb SINE Alu 1 294 -18 1206 152 0 61 chr2 239405011 239405177 -11282677 + AluJb SINE Alu 149 299 -13 365 158 0 0 chr2 239405198 239405255 -11282599 - FLAM_A SINE Alu -39 94 38 316 247 0 25 chr2 239405482 239405563 -11282291 - L1ME2 LINE L1 0 6164 6086 2275 107 3 0 chr2 239406422 239406720 -11281134 - AluSp SINE Alu -14 299 1 1966 117 46 11 chr2 239407077 239407358 -11280496 + AluSc SINE Alu 1 291 -18 1551 172 23 11 chr2 239407579 239407841 -11280013 - AluSx SINE Alu -47 265 1 443 263 130 72 chr2 239408092 239408165 -11279689 + L2 LINE L2 2629 2696 -576 1683 164 16 36 chr2 239408165 239408276 -11279578 + AluJo SINE Alu 1 113 -199 324 0 0 0 chr2 239408276 239408312 -11279542 + (CA)n Simple_repeat Simple_repeat 2 37 0 1683 164 16 36 chr2 239408312 239408339 -11279515 + AluJo SINE Alu 113 139 -173 198 0 0 0 chr2 239408339 239408361 -11279493 + (CA)n Simple_repeat Simple_repeat 2 23 0 1683 164 16 36 chr2 239408361 239408526 -11279328 + AluJo SINE Alu 139 299 -13 443 263 130 72 chr2 239408526 239408900 -11278954 + L2 LINE L2 2696 3107 -165 207 258 135 22 chr2 239409519 239409608 -11278246 - MIR SINE MIR -15 247 149 2105 100 14 14 chr2 239409686 239409977 -11277877 + AluSx SINE Alu 1 291 -21 2170 115 3 25 chr2 239409979 239410118 -11277736 + AluSx SINE Alu 2 143 -169 2194 117 0 3 chr2 239410118 239410426 -11277428 + AluSc SINE Alu 1 307 -2 2170 115 3 25 chr2 239410426 239410600 -11277254 + AluSx SINE Alu 143 308 -4 25 0 0 0 chr2 239410991 239411016 -11276838 + AT_rich Low_complexity Low_complexity 1 25 0 2344 72 0 7 chr2 239411020 239411312 -11276542 + AluSc SINE Alu 1 290 -19 602 251 67 28 chr2 239411907 239412086 -11275768 + L2 LINE L2 3119 3304 -9 236 335 239 5 chr2 239412091 239412288 -11275566 - MIR SINE MIR 0 262 20 913 94 0 43 chr2 239412326 239412464 -11275390 - FLAM_C SINE Alu 0 133 2 268 336 0 19 chr2 239412496 239412600 -11275254 - MER5A DNA MER1_type -86 103 2 2380 102 3 0 chr2 239413008 239413312 -11274542 + AluSx SINE Alu 1 305 -7 399 178 14 0 chr2 239414399 239414472 -11273382 + MLT1K LTR MaLR 179 252 -336 440 104 21 21 chr2 239414534 239414630 -11273224 + (TCTA)n Simple_repeat Simple_repeat 2 97 0 253 239 152 65 chr2 239414675 239414859 -11272995 + MLT1K LTR MaLR 375 574 -14 2067 136 24 75 chr2 239414886 239414971 -11272883 + MLT1B LTR MaLR 1 89 -301 2088 151 0 10 chr2 239414971 239415282 -11272572 + AluJb SINE Alu 5 312 0 2067 136 24 75 chr2 239415282 239415607 -11272247 + MLT1B LTR MaLR 89 390 0 236 279 52 22 chr2 239415978 239416114 -11271740 + MER20B DNA MER1_type 5 144 -639 813 241 51 101 chr2 239416142 239416374 -11271480 + MER20B DNA MER1_type 371 613 -170 213 39 0 0 chr2 239416374 239416400 -11271454 + (TA)n Simple_repeat Simple_repeat 1 26 0 1498 128 0 0 chr2 239416410 239416613 -11271241 + AluJb SINE Alu 85 287 -25 813 241 51 101 chr2 239416613 239416804 -11271050 + MER20B DNA MER1_type 622 783 0 2205 85 36 67 chr2 239418353 239418685 -11269169 - L1MA1 LINE L1 -34 6268 5948 2242 119 0 0 chr2 239418685 239418987 -11268867 - AluJb SINE Alu -10 302 1 2205 85 36 67 chr2 239418987 239419042 -11268812 - L1MA1 LINE L1 -354 5948 5893 575 179 106 0 chr2 239419213 239419336 -11268518 + MLT1C LTR MaLR 4 139 -328 631 267 23 6 chr2 239419344 239419520 -11268334 + MLT1C LTR MaLR 287 465 -2 655 246 30 18 chr2 239419549 239419716 -11268138 - MLT1J LTR MaLR -199 312 144 2278 104 13 0 chr2 239419751 239420059 -11267795 + AluSx SINE Alu 1 312 0 183 80 0 0 chr2 239421417 239421442 -11266412 + (GGGA)n Simple_repeat Simple_repeat 3 27 0 300 232 32 97 chr2 239421780 239421965 -11265889 + MLT1K LTR MaLR 388 560 -28 1938 111 8 4 chr2 239422853 239423114 -11264740 + AluSg SINE Alu 37 298 -12 2498 65 3 3 chr2 239423295 239423602 -11264252 + AluY SINE Alu 1 307 -4 265 218 46 23 chr2 239424721 239424808 -11263046 + L1MC5 LINE L1 7835 7923 -38 2366 104 0 9 chr2 239425420 239425736 -11262118 + AluSq SINE Alu 1 313 0 419 213 0 0 chr2 239425745 239425820 -11262034 + MER21B LTR ERV1 13 87 -776 2714 219 153 9 chr2 239425843 239426056 -11261798 + MER21B LTR ERV1 20 201 -662 2374 73 3 3 chr2 239426056 239426366 -11261488 + AluSp SINE Alu 1 310 0 2714 219 153 9 chr2 239426366 239426842 -11261012 + MER21B LTR ERV1 201 825 -38 1888 146 3 23 chr2 239426842 239427143 -11260711 + AluJo SINE Alu 1 295 -17 2714 219 153 9 chr2 239427143 239427188 -11260666 + MER21B LTR ERV1 825 862 -1 365 155 0 0 chr2 239427218 239427276 -11260578 - MLT1K LTR MaLR 0 588 531 765 145 7 62 chr2 239427289 239427434 -11260420 - FLAM_C SINE Alu 0 143 7 1761 171 0 4 chr2 239427488 239427762 -11260092 + AluJb SINE Alu 24 296 -16 503 230 43 7 chr2 239427974 239428113 -11259741 - MLT1K LTR MaLR -320 268 125 220 325 77 8 chr2 239428230 239428347 -11259507 + MIR SINE MIR 10 134 -128 1051 197 5 121 chr2 239428360 239428712 -11259142 - MER92C LTR ERV1 -246 308 1 193 230 24 167 chr2 239428712 239428770 -11259084 + MIR SINE MIR 131 163 -99 2200 107 10 0 chr2 239428770 239429061 -11258793 - AluSx SINE Alu -18 294 1 193 230 24 167 chr2 239429061 239429128 -11258726 + MIR SINE MIR 163 238 -24 278 186 157 0 chr2 239429197 239429267 -11258587 + MER53 DNA DNA 105 185 -4 193 378 81 0 chr2 239429569 239429680 -11258174 + L2 LINE L2 3144 3263 -9 203 311 151 8 chr2 239429939 239430058 -11257796 + L2 LINE L2 3136 3271 -1 408 278 93 0 chr2 239430821 239430929 -11256925 - FLAM_C SINE Alu -24 119 2 1778 102 49 26 chr2 239430986 239431134 -11256720 - AluSx SINE Alu -37 275 117 189 0 111 0 chr2 239431134 239431170 -11256684 + T-rich Low_complexity Low_complexity 2 41 0 1778 102 49 26 chr2 239431170 239431286 -11256568 - AluSx SINE Alu -195 117 5 658 105 18 0 chr2 239431328 239431442 -11256412 + (TAGA)n Simple_repeat Simple_repeat 3 118 0 633 181 9 9 chr2 239431528 239431644 -11256210 + AluSg/x SINE Alu 84 199 -113 2317 61 18 0 chr2 239431854 239432131 -11255723 - AluY SINE Alu -18 293 12 2432 69 10 3 chr2 239433331 239433634 -11254220 + AluSc SINE Alu 2 306 -3 2344 99 0 3 chr2 239434250 239434543 -11253311 + AluSx SINE Alu 15 306 -6 345 188 0 0 chr2 239436147 239436211 -11251643 + MER53 DNA DNA 2 65 -124 1759 151 10 30 chr2 239437127 239437432 -11250422 + AluJb SINE Alu 5 303 -9 370 286 57 0 chr2 239437433 239437538 -11250316 + MIR SINE MIR 149 259 -3 195 274 97 16 chr2 239437667 239437729 -11250125 - L2 LINE L2 -5 3308 3242 346 289 237 5 chr2 239437766 239438013 -11249841 - L2 LINE L2 -256 3016 2720 260 145 16 32 chr2 239438034 239438096 -11249758 - L1ME4a LINE L1 0 6121 6061 2762 129 29 102 chr2 239438211 239438806 -11249048 + L1MB8 LINE L1 5565 6202 24 212 0 36 0 chr2 239438806 239438834 -11249020 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2066 124 0 0 chr2 239438836 239439109 -11248745 - AluSq SINE Alu -34 279 7 2762 129 29 102 chr2 239439109 239439167 -11248687 + L1MB8 LINE L1 6112 6173 -5 542 209 23 47 chr2 239439194 239439323 -11248531 - MIR SINE MIR -136 126 1 37 0 0 0 chr2 239440079 239440116 -11247738 + AT_rich Low_complexity Low_complexity 1 37 0 789 267 70 29 chr2 239441177 239441679 -11246175 - MLT1G3 LTR MaLR -11 584 2 1708 170 35 3 chr2 239443040 239443329 -11244525 + AluJo SINE Alu 6 303 -9 1721 183 45 12 chr2 239443550 239443883 -11243971 + MER2 DNA MER2_type 1 344 0 636 75 43 0 chr2 239444401 239444495 -11243359 - AluSg SINE Alu -211 99 2 786 207 29 0 chr2 239444496 239444670 -11243184 - L1M4 LINE L1 -399 5785 5607 2250 101 13 0 chr2 239445752 239446050 -11241804 + AluSp SINE Alu 1 302 -11 2484 76 3 0 chr2 239446345 239446647 -11241207 - AluSx SINE Alu -9 303 1 2176 120 3 10 chr2 239447640 239447940 -11239914 - AluSx SINE Alu -14 298 1 573 277 16 37 chr2 239448151 239448339 -11239515 - MIR SINE MIR 0 262 79 220 360 22 11 chr2 239448338 239448427 -11239427 - MIR3 SINE MIR -109 99 10 * 225 163 41 41 chr2 239449236 239449285 -11238569 - L1M4 LINE L1 -2456 5586 5538 2481 93 0 3 chr2 239449577 239449888 -11237966 - AluSg SINE Alu 0 310 1 2181 121 6 13 chr2 239450250 239450563 -11237291 + AluSx SINE Alu 1 311 -1 294 95 0 0 chr2 239450583 239450625 -11237229 + (CATA)n Simple_repeat Simple_repeat 4 45 0 571 293 54 28 chr2 239450816 239451133 -11236721 + L1MC/D LINE L1 5255 5579 -2229 565 361 138 9 chr2 239451381 239452013 -11235841 - L2 LINE L2 -341 2973 2261 279 241 64 21 chr2 239453229 239453370 -11234484 + L1M4c LINE L1 1178 1324 -5060 227 259 0 0 chr2 239453394 239453448 -11234406 + L1M4c LINE L1 3059 3112 -3270 937 215 121 64 chr2 239453449 239453507 -11234347 - MLT1F1 LTR MaLR -1 592 539 2106 141 7 0 chr2 239453507 239453804 -11234050 - AluSx SINE Alu -13 299 1 1673 166 38 7 chr2 239453806 239454096 -11233758 - AluJb SINE Alu -13 299 1 937 215 121 64 chr2 239454096 239454113 -11233741 - MLT1F1 LTR MaLR -54 539 524 1831 181 26 9 chr2 239454113 239454455 -11233399 + MER7A DNA MER2_type 1 346 0 937 215 121 64 chr2 239454455 239454872 -11232982 - MLT1F1 LTR MaLR -69 524 1 236 200 15 46 chr2 239454872 239454937 -11232917 + L1M4c LINE L1 3109 3171 -3211 2303 112 0 0 chr2 239454990 239455286 -11232568 + AluSg SINE Alu 1 296 -14 2278 97 3 0 chr2 239455440 239455730 -11232124 + AluSq SINE Alu 5 295 -18 405 250 0 0 chr2 239455979 239456055 -11231799 - LTR67 LTR ERVL -367 190 115 2278 109 3 0 chr2 239456185 239456487 -11231367 - AluSx SINE Alu -9 303 1 508 251 54 20 chr2 239456562 239456765 -11231089 + L1MEd LINE L1 1149 1358 -5014 915 139 46 20 chr2 239456816 239456967 -11230887 + FRAM SINE Alu 8 162 -14 243 56 0 0 chr2 239456967 239457003 -11230851 + L1MB4 LINE L1 6133 6168 -12 422 303 129 22 chr2 239457013 239457443 -11230411 + L1MEd LINE L1 1276 1692 -4692 2407 91 3 0 chr2 239457750 239458048 -11229806 + AluSq SINE Alu 1 299 -14 209 164 41 68 chr2 239458390 239458463 -11229391 + T-rich Low_complexity Low_complexity 3 73 0 2279 100 3 3 chr2 239459218 239459518 -11228336 + AluY SINE Alu 1 300 -11 239 211 58 0 chr2 239459599 239459651 -11228203 - L1MC4 LINE L1 -122 7920 7866 25 31 0 0 chr2 239459923 239459955 -11227899 + AT_rich Low_complexity Low_complexity 1 32 0 215 289 78 62 chr2 239460269 239460397 -11227457 - L2 LINE L2 -10 3262 3133 356 357 42 14 chr2 239460567 239460992 -11226862 - L1 LINE L1 -1167 4979 4535 1996 169 144 0 chr2 239461029 239461438 -11226416 + MLT1D LTR MaLR 7 474 -31 6570 122 16 11 chr2 239461444 239462477 -11225377 + L1MA2 LINE L1 5024 6067 -237 2098 127 7 3 chr2 239462477 239462768 -11225086 + AluSx SINE Alu 1 292 -20 6570 122 16 11 chr2 239462768 239463008 -11224846 + L1MA2 LINE L1 6067 6304 0 1588 116 0 59 chr2 239463021 239463324 -11224530 - AluSq SINE Alu -28 285 1 1035 177 6 6 chr2 239463474 239463649 -11224205 + AluJb SINE Alu 137 311 -1 421 266 142 77 chr2 239463669 239463944 -11223910 + MLT1L LTR MaLR 85 389 -226 2571 59 16 0 chr2 239463944 239464250 -11223604 - AluY SINE Alu 0 311 1 421 266 142 77 chr2 239464250 239464327 -11223527 + MLT1L LTR MaLR 389 460 -155 324 0 0 0 chr2 239464746 239464782 -11223072 + (CA)n Simple_repeat Simple_repeat 2 37 0 639 124 54 39 chr2 239464923 239465052 -11222802 + FLAM_C SINE Alu 12 142 -1 555 236 139 79 chr2 239465614 239465649 -11222205 + L1MEc LINE L1 1780 1811 -4585 363 44 0 0 chr2 239465649 239465694 -11222160 + (CA)n Simple_repeat Simple_repeat 2 46 0 555 236 139 79 chr2 239465694 239466140 -11221714 + L1MEc LINE L1 1811 2290 -4106 * 670 229 54 0 chr2 239466116 239466282 -11221572 + L1M4 LINE L1 4745 4919 -1296 2121 121 0 7 chr2 239466282 239466585 -11221269 - AluSg SINE Alu 0 302 2 2468 80 0 0 chr2 239466586 239466885 -11220969 - AluY SINE Alu -12 299 1 26 0 0 0 chr2 239466893 239466919 -11220935 + AT_rich Low_complexity Low_complexity 1 26 0 238 123 88 0 chr2 239467369 239467426 -11220428 + L1MB3 LINE L1 6120 6181 -2 2337 94 16 0 chr2 239467436 239467743 -11220111 + AluSq SINE Alu 1 312 -1 434 163 33 0 chr2 239467824 239467916 -11219938 + L1MA5 LINE L1 6206 6300 0 1919 151 3 3 chr2 239468367 239468658 -11219196 - AluSg SINE Alu -19 291 1 2356 106 3 3 chr2 239469016 239469328 -11218526 - AluSx SINE Alu 0 312 1 2233 114 10 0 chr2 239469330 239469629 -11218225 - AluSq SINE Alu -11 302 1 2478 54 0 10 chr2 239471815 239472110 -11215744 + AluY SINE Alu 1 292 -19 528 45 0 0 chr2 239472430 239472497 -11215357 + (TG)n Simple_repeat Simple_repeat 1 67 0 2041 95 27 17 chr2 239473347 239473641 -11214213 + AluSx SINE Alu 1 297 -15 211 0 28 56 chr2 239474269 239474305 -11213549 + (TAAAAA)n Simple_repeat Simple_repeat 1 35 0 189 147 0 0 chr2 239474327 239474361 -11213493 + (GAAAA)n Simple_repeat Simple_repeat 1 34 0 396 270 74 67 chr2 239474361 239474631 -11213223 + MER96B DNA MER1_type? 131 402 -15 449 223 231 19 chr2 239474766 239475022 -11212832 - MLT1H LTR MaLR -6 549 240 8648 43 2 8 chr2 239475596 239476674 -11211180 + MER11C LTR ERVK 1 1071 0 1798 198 25 43 chr2 239477097 239477156 -11210698 - MER63B DNA MER1_type -626 436 377 2472 89 0 0 chr2 239477156 239477458 -11210396 - AluSx SINE Alu -10 302 1 1798 198 25 43 chr2 239477458 239477842 -11210012 - MER63B DNA MER1_type -685 377 1 494 172 147 0 chr2 239478652 239478768 -11209086 - FLAM_C SINE Alu 0 133 1 2213 88 0 4 chr2 239478827 239479099 -11208755 + AluSg SINE Alu 1 271 -39 227 71 35 118 chr2 239480682 239480851 -11207003 + (CACTC)n Simple_repeat Simple_repeat 3 157 0 344 28 85 102 chr2 239480920 239481097 -11206757 + (CACTC)n Simple_repeat Simple_repeat 3 176 0 181 64 110 81 chr2 239481148 239481321 -11206533 + (CACTC)n Simple_repeat Simple_repeat 3 180 0 231 72 51 109 chr2 239481356 239481494 -11206360 + (CACTC)n Simple_repeat Simple_repeat 3 132 0 189 224 61 0 chr2 239483401 239483450 -11204404 - MER5A DNA MER1_type -107 82 31 612 216 26 20 chr2 239483591 239483604 -11204250 - L1MA10 LINE L1 -1 6333 6321 574 304 42 17 chr2 239483604 239483841 -11204013 - L1ME1 LINE L1 -5 6161 5919 2114 191 91 52 chr2 239484027 239484127 -11203727 - L1ME1 LINE L1 -254 5912 5817 2243 95 0 7 chr2 239484127 239484453 -11203401 - AluY SINE Alu 0 324 1 2114 191 91 52 chr2 239484453 239484629 -11203225 - L1ME1 LINE L1 -349 5817 5649 822 165 0 0 chr2 239484629 239484762 -11203092 + AluJ SINE Alu 1 133 -169 2114 191 91 52 chr2 239484762 239485286 -11202568 - L1ME1 LINE L1 -517 5649 5079 267 224 12 35 chr2 239485577 239485662 -11202192 + CT-rich Low_complexity Low_complexity 3 85 0 1250 114 0 0 chr2 239486018 239486184 -11201670 + AluJ SINE Alu 135 300 -12 2210 233 37 29 chr2 239486419 239487012 -11200842 - MLT1E2 LTR MaLR -28 598 1 233 277 9 71 chr2 239487206 239487318 -11200536 - MLT1K LTR MaLR -355 233 129 44 20 0 0 chr2 239487471 239487522 -11200332 + AT_rich Low_complexity Low_complexity 1 51 0 1412 157 15 38 chr2 239487529 239487790 -11200064 - AluJb SINE Alu -57 255 1 243 224 0 0 chr2 239487846 239487895 -11199959 + MIR SINE MIR 116 164 -98 261 155 0 0 chr2 239489126 239489184 -11198670 + (TG)n Simple_repeat Simple_repeat 2 59 0 405 313 6 17 chr2 239489227 239489403 -11198451 + (TG)n Simple_repeat Simple_repeat 1 174 0 261 360 21 48 chr2 239489977 239490166 -11197688 + MLT1K LTR MaLR 133 316 -272 305 266 38 0 chr2 239490301 239490380 -11197474 + MLT1K LTR MaLR 499 580 -8 221 286 13 26 chr2 239490720 239490797 -11197057 + MER5B DNA MER1_type 1 76 -102 2476 82 3 7 chr2 239490972 239491277 -11196577 - AluSx SINE Alu -8 304 1 367 309 132 0 chr2 239494304 239494440 -11193414 + MIR SINE MIR 108 261 -1 1627 83 58 80 chr2 239495314 239495590 -11192264 - AluSq SINE Alu -43 270 1 598 301 61 64 chr2 239496251 239496563 -11191291 - L1ME4a LINE L1 -237 5884 5574 636 144 6 4 chr2 239496926 239497053 -11190801 - MLT1E LTR MaLR 0 593 499 403 123 15 0 chr2 239497137 239497202 -11190652 - AluSc SINE Alu 0 299 234 2187 136 24 11 chr2 239497303 239497678 -11190176 - HERVH LTR ERV1 -7333 380 1 2526 88 123 25 chr2 239497680 239498088 -11189766 - LTR7 LTR ERV1 -2 448 1 443 281 95 45 chr2 239498565 239498786 -11189068 + MIR SINE MIR 15 246 -16 258 261 78 11 chr2 239499399 239499602 -11188252 + L1ME3A LINE L1 5742 5952 -218 223 343 71 25 chr2 239499967 239500086 -11187768 + MIR SINE MIR 30 153 -63 242 0 0 57 chr2 239500866 239500901 -11186953 + (TGG)n Simple_repeat Simple_repeat 1 33 0 254 176 0 20 chr2 239501909 239501960 -11185894 + LTR29 LTR ERV1 158 207 -415 * 535 256 183 47 chr2 239501950 239502267 -11185587 + LTR48B LTR ERV1 93 452 -192 2851 130 121 7 chr2 239502387 239502932 -11184922 + LTR62 LTR ERVK 111 717 -2 1506 278 19 44 chr2 239502956 239503543 -11184311 + HERVL32 LTR ERVL 1140 1691 -1733 2433 90 6 0 chr2 239503657 239503968 -11183886 - AluSp SINE Alu 0 313 1 1299 206 5 60 chr2 239503968 239504094 -11183760 - L1M4 LINE L1 -951 5195 5064 1286 158 5 18 chr2 239504094 239504316 -11183538 - MER20 DNA MER1_type 0 219 1 1299 206 5 60 chr2 239504316 239504557 -11183297 - L1M4 LINE L1 -1082 5064 4848 680 168 76 22 chr2 239504558 239504743 -11183111 + AluSg1 SINE Alu 4 198 -111 2173 124 10 0 chr2 239506383 239506682 -11181172 + AluSq SINE Alu 1 302 -11 1983 131 3 3 chr2 239506684 239506966 -11180888 + AluSx SINE Alu 1 282 -30 959 184 11 0 chr2 239507570 239507749 -11180105 + L1MDa LINE L1 21 201 -6339 1325 169 5 5 chr2 239507749 239507962 -11179892 - AluJb SINE Alu -14 298 86 1208 214 92 99 chr2 239507962 239508449 -11179405 + L1MDa LINE L1 196 679 -5861 185 318 178 0 chr2 239509136 239509243 -11178611 + L2 LINE L2 2614 2739 -575 646 251 94 14 chr2 239509297 239509520 -11178334 + MIR SINE MIR 12 252 -10 2035 113 53 0 chr2 239509744 239510028 -11177826 - AluSq SINE Alu -12 301 3 373 282 0 19 chr2 239510171 239510274 -11177580 - MARNA DNA Mariner -74 512 412 24 32 0 0 chr2 239510857 239510888 -11176966 + AT_rich Low_complexity Low_complexity 1 31 0 1234 225 111 3 chr2 239510977 239511284 -11176570 + MER58B DNA MER1_type 2 341 0 233 291 97 29 chr2 239511284 239511387 -11176467 + MIR3 SINE MIR 54 163 -45 2131 112 37 0 chr2 239512388 239512683 -11175171 - AluSp SINE Alu -7 306 1 695 268 24 6 chr2 239513157 239513325 -11174529 + MIR SINE MIR 40 210 -52 376 264 21 22 chr2 239513325 239513467 -11174387 - L1MD3 LINE L1 -89 7891 7591 2175 96 23 7 chr2 239513746 239514048 -11173806 - AluSx SINE Alu -5 307 1 628 195 16 0 chr2 239515150 239515273 -11172581 - Charlie1 DNA MER1_type -4 2757 2633 2320 105 0 10 chr2 239515279 239515585 -11172269 + AluSx SINE Alu 1 303 -9 1766 189 3 0 chr2 239515595 239515902 -11171952 + AluJb SINE Alu 1 308 -4 379 306 47 84 chr2 239516812 239517132 -11170722 + L1ME4a LINE L1 5677 5984 -137 255 247 31 52 chr2 239517360 239517457 -11170397 - LTR67 LTR ERVL -88 469 375 505 268 86 35 chr2 239517494 239517692 -11170162 - LTR67 LTR ERVL -263 294 87 252 0 0 0 chr2 239517805 239517833 -11170021 + (CTTTG)n Simple_repeat Simple_repeat 4 31 0 567 93 13 0 chr2 239517845 239517920 -11169934 - FLAM SINE Alu -29 114 39 208 59 39 59 chr2 239517931 239517982 -11169872 + (CATGT)n Simple_repeat Simple_repeat 1 50 0 290 275 126 0 chr2 239518064 239518202 -11169652 + L1ME4a LINE L1 5618 5770 -351 618 303 100 0 chr2 239518218 239518449 -11169405 + MIR SINE MIR 9 262 0 474 210 154 0 chr2 239518564 239518707 -11169147 + L1ME4a LINE L1 5956 6120 -1 286 329 130 0 chr2 239518916 239519062 -11168792 - MIR SINE MIR -70 192 28 1998 166 3 0 chr2 239519458 239519759 -11168095 + AluJb SINE Alu 1 302 -10 206 273 0 0 chr2 239520238 239520282 -11167572 - L2 LINE L2 -19 3294 3251 311 287 0 11 chr2 239520287 239520381 -11167473 - L1ME2 LINE L1 -10 6154 6062 273 258 34 22 chr2 239520422 239520511 -11167343 - MIR SINE MIR -109 153 64 524 227 84 35 chr2 239520634 239520837 -11167017 - MLT1K LTR MaLR -46 542 330 2259 112 7 0 chr2 239521806 239522111 -11165743 + AluSg SINE Alu 1 307 -3 227 276 39 103 chr2 239522155 239522202 -11165652 - L3 LINE CR1 -8 1569 1521 2315 108 3 0 chr2 239522202 239522497 -11165357 + AluSq SINE Alu 1 296 -17 227 276 39 103 chr2 239522497 239522605 -11165249 - L3 LINE CR1 -56 1521 1424 2524 70 0 0 chr2 239522629 239522928 -11164926 + AluSc SINE Alu 1 299 -10 2174 105 0 3 chr2 239522965 239523260 -11164594 + AluSx SINE Alu 1 294 -18 1981 149 24 0 chr2 239523275 239523571 -11164283 + AluSx SINE Alu 5 307 -5 23 0 0 0 chr2 239523707 239523730 -11164124 + GC_rich Low_complexity Low_complexity 1 23 0 1010 136 19 7 chr2 239523991 239524145 -11163709 - FRAM SINE Alu -18 158 3 1499 153 0 0 chr2 239524182 239524398 -11163456 + AluSg/x SINE Alu 88 303 -9 2416 93 3 0 chr2 239524694 239524995 -11162859 - AluSp SINE Alu -11 302 1 2440 200 37 21 chr2 239526078 239526252 -11161602 + L1MB7 LINE L1 5607 5777 -407 2383 91 0 0 chr2 239526252 239526548 -11161306 + AluSg SINE Alu 1 296 -14 2440 200 37 21 chr2 239526548 239526942 -11160912 + L1MB7 LINE L1 5777 6184 0 688 159 7 35 chr2 239526956 239527101 -11160753 + AluSq/x SINE Alu 3 143 -170 2372 104 0 0 chr2 239527856 239528154 -11159700 + AluSx SINE Alu 1 298 -14 2316 97 0 0 chr2 239528308 239528598 -11159256 + AluSx SINE Alu 5 294 -18 405 250 0 0 chr2 239528847 239528923 -11158931 - LTR67 LTR ERVL -367 190 115 2443 80 3 0 chr2 239529053 239529353 -11158501 - AluSx SINE Alu -9 303 3 226 160 0 60 chr2 239529380 239529430 -11158424 + L1ME4a LINE L1 5557 5603 -639 457 297 61 77 chr2 239529483 239529796 -11158058 + L1ME4a LINE L1 5677 5984 -137 255 247 31 52 chr2 239530027 239530124 -11157730 - LTR67 LTR ERVL -88 469 375 2383 60 7 17 chr2 239530840 239531140 -11156714 + AluSp SINE Alu 1 297 -16 2402 68 7 26 chr2 239531156 239531464 -11156390 + AluSp SINE Alu 1 302 -11 2046 164 0 3 chr2 239531552 239531862 -11155992 + AluJb SINE Alu 1 309 -3 301 351 18 0 chr2 239532046 239532160 -11155694 + L2 LINE L2 3151 3266 -6 2356 111 0 0 chr2 239532196 239532503 -11155351 + AluSx SINE Alu 2 308 -4 305 176 11 33 chr2 239532653 239532744 -11155110 - L1ME3A LINE L1 -221 5949 5861 828 225 145 47 chr2 239532753 239533180 -11154674 - MLT1H LTR MaLR -24 525 57 220 191 21 21 chr2 239533669 239533716 -11154138 - L2 LINE L2 0 3313 3267 1494 210 61 21 chr2 239533720 239534149 -11153705 - L1M4 LINE L1 -3539 2607 2162 979 202 4 49 chr2 239534164 239534431 -11153423 - L1MB8 LINE L1 -1 6177 5923 1851 159 3 22 chr2 239534450 239534765 -11153089 - AluJb SINE Alu -3 309 1 5061 123 19 12 chr2 239534765 239535799 -11152055 - L1MA2 LINE L1 -238 6066 5024 1996 169 144 0 chr2 239535805 239536214 -11151640 - MLT1D LTR MaLR -31 474 7 356 357 42 14 chr2 239536251 239536676 -11151178 + L1M4 LINE L1 4535 4979 -1167 269 276 79 55 chr2 239536846 239536973 -11150881 + L2 LINE L2 3133 3262 -10 25 31 0 0 chr2 239537287 239537319 -11150535 + AT_rich Low_complexity Low_complexity 1 32 0 338 193 79 29 chr2 239537802 239537942 -11149912 + LTR2 LTR ERV1 303 449 0 33003 72 8 10 chr2 239537946 239542424 -11145430 + HERVE LTR ERV1 5 4470 -3343 21064 55 10 0 chr2 239542407 239545065 -11142789 + HERVE LTR ERV1 5129 7812 -1 * 1701 210 39 39 chr2 239545154 239545563 -11142291 + LTR2 LTR ERV1 41 449 0 407 179 0 13 chr2 239545616 239545694 -11142160 - MER45A DNA AcHobo -5 173 97 914 75 25 8 chr2 239545700 239545820 -11142034 + AluJo SINE Alu 14 135 -177 1302 85 0 6 chr2 239545823 239545987 -11141867 - AluY SINE Alu -22 289 127 1067 89 0 0 chr2 239546059 239546194 -11141660 + AluJb SINE Alu 173 307 -5 240 288 0 15 chr2 239546808 239546874 -11140980 - MIR SINE MIR -1 261 197 914 196 126 68 chr2 239547987 239548385 -11139469 + LTR37A LTR ERV1 1 421 -5 241 238 180 57 chr2 239548561 239548683 -11139171 + MER5B DNA MER1_type 42 178 0 21 36 0 0 chr2 239549156 239549184 -11138670 + GC_rich Low_complexity Low_complexity 1 28 0 1521 153 73 47 chr2 239549883 239550183 -11137671 + AluJb SINE Alu 1 308 -4 1134 221 66 136 chr2 239550593 239551248 -11136606 + LTR36 LTR ERV1 1 609 -2 2291 119 0 3 chr2 239551293 239551604 -11136250 + AluSx SINE Alu 3 312 0 1113 195 182 51 chr2 239551664 239552132 -11135722 + MLT1E2 LTR MaLR 17 605 -49 22 88 0 0 chr2 239552854 239552911 -11134943 + GC_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr2 239553083 239553105 -11134749 + GC_rich Low_complexity Low_complexity 1 22 0 200 191 0 0 chr2 239553114 239553156 -11134698 + G-rich Low_complexity Low_complexity 1 42 0 233 271 106 0 chr2 239554591 239554676 -11133178 - MIR SINE MIR -113 149 56 234 0 0 0 chr2 239557249 239557275 -11130579 + (T)n Simple_repeat Simple_repeat 1 26 0 1729 209 39 32 chr2 239557952 239558358 -11129496 + LTR2 LTR ERV1 41 449 0 887 122 81 81 chr2 239558484 239558582 -11129272 + L1MB2 LINE L1 5943 6040 -131 1620 162 0 93 chr2 239558582 239558854 -11129000 - AluJo SINE Alu 0 302 65 1736 138 48 24 chr2 239558854 239558992 -11128862 + AluJo SINE Alu 1 134 -178 2379 95 13 0 chr2 239558992 239559297 -11128557 + AluSq SINE Alu 2 310 -3 1736 138 48 24 chr2 239559297 239559448 -11128406 + AluJo SINE Alu 134 297 -15 1620 162 0 93 chr2 239559448 239559508 -11128346 - AluJo SINE Alu -237 65 1 887 122 81 81 chr2 239559508 239559630 -11128224 + L1MB2 LINE L1 6039 6163 -8 31 20 0 20 chr2 239559657 239559685 -11128169 + AT_rich Low_complexity Low_complexity 1 29 -19 1865 154 25 0 chr2 239559685 239559965 -11127889 + AluSx SINE Alu 9 295 -17 31 20 0 20 chr2 239559965 239559985 -11127869 + AT_rich Low_complexity Low_complexity 29 48 0 584 191 35 0 chr2 239560009 239560124 -11127730 + AluJo SINE Alu 119 237 -75 1704 131 4 0 chr2 239560125 239560361 -11127493 - AluSg/x SINE Alu -3 309 73 392 295 6 38 chr2 239560397 239560610 -11127244 + T-rich Low_complexity Low_complexity 1 206 0 231 333 18 9 chr2 239560712 239560855 -11126999 + T-rich Low_complexity Low_complexity 1 144 0 1753 156 9 70 chr2 239561008 239561335 -11126519 - AluJb SINE Alu -5 307 1 795 219 30 24 chr2 239561354 239561518 -11126336 - FRAM SINE Alu 0 166 2 685 161 82 30 chr2 239561524 239561753 -11126101 - Charlie4 DNA MER1_type -6 1955 1718 277 273 15 0 chr2 239561756 239561822 -11126032 + L1ME LINE L1 12 78 -5992 876 161 7 0 chr2 239561825 239561968 -11125886 + AluJb SINE Alu 1 144 -168 1588 113 17 0 chr2 239561968 239562207 -11125647 + AluSx SINE Alu 1 243 -69 24 0 0 0 chr2 239562508 239562532 -11125322 + AT_rich Low_complexity Low_complexity 1 24 0 322 103 17 52 chr2 239562540 239562598 -11125256 + LTR7 LTR ERV1 395 450 0 1753 156 40 58 chr2 239562775 239563153 -11124701 - HERVH LTR ERV1 -1804 5909 5539 2771 170 7 0 chr2 239563153 239563627 -11124227 - HERVH LTR ERV1 -2850 4135 3959 2979 104 0 11 chr2 239563664 239564107 -11123747 - HERVH LTR ERV1 -3720 3993 3556 1634 174 0 0 chr2 239564107 239564372 -11123482 - AluJb SINE Alu -47 265 1 949 182 14 29 chr2 239564376 239564585 -11123269 - L1ME2 LINE L1 -1 6163 5958 31 58 0 0 chr2 239564603 239564655 -11123199 + AT_rich Low_complexity Low_complexity 1 52 0 2328 87 3 0 chr2 239564930 239565240 -11122614 + AluY SINE Alu 1 311 0 2224 84 10 0 chr2 239566167 239566475 -11121379 + AluSx SINE Alu 1 311 -1 1105 112 0 6 chr2 239566481 239566642 -11121212 + AluSg SINE Alu 1 160 -150 2198 86 0 3 chr2 239566893 239567184 -11120670 + AluSx SINE Alu 1 290 -22 2234 97 7 3 chr2 239567192 239567500 -11120354 + AluSq SINE Alu 1 309 -4 2259 84 3 3 chr2 239567528 239567837 -11120017 + AluSx SINE Alu 1 309 -3 1337 272 82 49 chr2 239567848 239568503 -11119351 + L1MC4a LINE L1 5284 5960 -1848 962 169 103 41 chr2 239568474 239568662 -11119192 + L1MB8 LINE L1 4968 5143 -1035 * 2426 46 10 7 chr2 239568662 239568969 -11118885 + AluY SINE Alu 1 308 -3 962 169 103 41 chr2 239568969 239568980 -11118874 + L1MB8 LINE L1 5143 5152 -1026 2275 83 10 0 chr2 239568980 239569280 -11118574 + AluSq SINE Alu 2 304 -9 962 169 103 41 chr2 239569280 239570086 -11117768 + L1MB8 LINE L1 5152 6162 -16 234 187 132 0 chr2 239570611 239570702 -11117152 - FRAM SINE Alu -1 165 63 244 171 0 0 chr2 239570903 239570938 -11116916 - Alu SINE Alu -262 41 7 1894 143 3 3 chr2 239571153 239571447 -11116407 - AluSx SINE Alu -18 294 1 2131 108 3 3 chr2 239571483 239571789 -11116065 - AluSc SINE Alu -3 306 1 28 0 0 0 chr2 239571868 239571896 -11115958 + AT_rich Low_complexity Low_complexity 1 28 0 546 56 14 0 chr2 239571896 239571967 -11115887 - U2 snRNA snRNA -116 72 1 2264 93 0 0 chr2 239573058 239573359 -11114495 + AluY SINE Alu 5 305 -6 389 316 129 36 chr2 239573396 239573728 -11114126 - L2 LINE L2 -1 3312 2950 2336 53 7 10 chr2 239574006 239574305 -11113549 + AluY SINE Alu 1 298 -13 759 193 42 78 chr2 239574522 239574671 -11113183 + MER20 DNA MER1_type 32 174 -45 1428 174 13 37 chr2 239574671 239574970 -11112884 + AluJb SINE Alu 1 292 -20 759 193 42 78 chr2 239574970 239575012 -11112842 + MER20 DNA MER1_type 174 216 -3 1629 111 4 11 chr2 239575499 239575760 -11112094 - AluSg SINE Alu -51 259 1 4382 221 104 87 chr2 239575760 239576484 -11111370 - L1M4 LINE L1 -1508 4638 3928 399 65 32 0 chr2 239576484 239576546 -11111308 - MADE1 DNA Mariner 0 80 17 4382 221 104 87 chr2 239576546 239576648 -11111206 - L1M4 LINE L1 -2218 3928 3829 2125 108 10 3 chr2 239576648 239576944 -11110910 - AluSq SINE Alu -15 298 1 1585 154 6 64 chr2 239576949 239577111 -11110743 - AluJo SINE Alu -18 294 157 2233 107 10 0 chr2 239577111 239577421 -11110433 - AluSq SINE Alu 0 313 1 1585 154 6 64 chr2 239577421 239577570 -11110284 - AluJo SINE Alu -155 157 1 270 0 9 0 chr2 239577576 239577651 -11110203 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 4382 221 104 87 chr2 239577651 239577678 -11110176 - L1M4 LINE L1 -2324 3822 3797 1967 134 3 0 chr2 239577678 239577977 -11109877 - AluSg SINE Alu -10 300 1 4382 221 104 87 chr2 239577977 239578395 -11109459 - L1M4 LINE L1 -2349 3797 3388 1620 150 0 72 chr2 239578395 239578723 -11109131 + AluJo SINE Alu 5 310 0 4382 221 104 87 chr2 239578723 239579559 -11108295 - L1M4 LINE L1 -2758 3388 2388 2000 87 47 0 chr2 239579560 239579837 -11108017 + AluY SINE Alu 1 290 -21 883 108 8 16 chr2 239579846 239579975 -11107879 + FLAM_C SINE Alu 1 128 -5 313 274 115 89 chr2 239579987 239580257 -11107597 - L1ME LINE L1 -5666 404 128 615 119 0 0 chr2 239580313 239580397 -11107457 + AluS SINE Alu 2 85 -228 458 173 24 39 chr2 239580567 239580694 -11107160 - FRAM SINE Alu -31 145 21 1128 114 0 0 chr2 239580739 239580905 -11106949 - AluSg/x SINE Alu -10 302 137 403 139 0 28 chr2 239580905 239580977 -11106877 + AluS SINE Alu 231 300 -2 11854 175 24 37 chr2 239581192 239581273 -11106581 + Charlie8 DNA MER1_type 74 155 -2262 1669 144 3 45 chr2 239581273 239581585 -11106269 + AluJb SINE Alu 3 301 -11 11854 175 24 37 chr2 239581585 239581819 -11106035 + Charlie8 DNA MER1_type 155 391 -2026 1938 122 35 0 chr2 239581819 239582107 -11105747 + AluSg SINE Alu 1 298 -12 11854 175 24 37 chr2 239582107 239584105 -11103749 + Charlie8 DNA MER1_type 391 2357 -60 2208 99 0 0 chr2 239584656 239584948 -11102906 + AluSq SINE Alu 1 292 -21 276 241 146 58 chr2 239584949 239585007 -11102847 - L1ME4a LINE L1 -9 6112 6060 2297 83 0 3 chr2 239585007 239585309 -11102545 + AluSc SINE Alu 1 301 -8 276 241 146 58 chr2 239585309 239585387 -11102467 - L1ME4a LINE L1 -61 6060 5964 1622 202 72 108 chr2 239585496 239585917 -11101937 + L1MC4 LINE L1 6126 6561 -1481 1642 153 3 34 chr2 239585917 239586211 -11101643 + AluJo SINE Alu 5 289 -23 1622 202 72 108 chr2 239586211 239586420 -11101434 + L1MC4 LINE L1 6561 6774 -1268 2058 125 3 0 chr2 239586420 239586443 -11101411 - AluSq SINE Alu -7 306 285 192 40 0 0 chr2 239586443 239586468 -11101386 + (GTTTG)n Simple_repeat Simple_repeat 1 25 0 2058 125 3 0 chr2 239586468 239586749 -11101105 - AluSq SINE Alu -28 285 1 1622 202 72 108 chr2 239586749 239586877 -11100977 + L1MC4 LINE L1 6774 6905 -1137 216 320 82 49 chr2 239586886 239587276 -11100578 - L2 LINE L2 -1212 2102 1700 701 288 153 18 chr2 239587320 239587706 -11100148 + MLT1J2 LTR MaLR 5 442 -8 436 286 42 12 chr2 239587707 239587875 -11099979 + L1MC4a LINE L1 5758 5930 -1878 2027 100 0 0 chr2 239587884 239588184 -11099670 + AluY SINE Alu 1 300 0 2163 99 10 0 chr2 239589119 239589412 -11098442 - AluSp SINE Alu -17 296 1 7845 47 36 16 chr2 239589552 239590539 -11097315 - LTR13 LTR ERVK 0 1007 1 1583 184 23 3 chr2 239590546 239590851 -11097003 + AluJb SINE Alu 1 311 -1 736 82 10 0 chr2 239591863 239591960 -11095894 + AluS SINE Alu 2 99 -213 2558 107 13 13 chr2 239592073 239592456 -11095398 - L1PA16 LINE L1 -132 6034 5652 674 124 0 0 chr2 239592495 239592584 -11095270 + AluSq SINE Alu 10 98 -215 1028 80 0 0 chr2 239592584 239592721 -11095133 + AluSp/q SINE Alu 170 306 -7 207 0 0 0 chr2 239592721 239592744 -11095110 + (TA)n Simple_repeat Simple_repeat 1 23 0 240 35 0 0 chr2 239592745 239592774 -11095080 + (CA)n Simple_repeat Simple_repeat 2 30 0 1981 99 21 11 chr2 239592787 239593069 -11094785 + AluSx SINE Alu 1 285 -27 46 16 0 16 chr2 239593069 239593107 -11094747 + AT_rich Low_complexity Low_complexity 1 39 -24 1850 140 7 0 chr2 239593107 239593392 -11094462 + AluSx SINE Alu 1 287 -25 46 16 0 16 chr2 239593392 239593417 -11094437 + AT_rich Low_complexity Low_complexity 39 63 0 24 67 0 0 chr2 239594054 239594099 -11093755 + AT_rich Low_complexity Low_complexity 1 45 0 2432 90 10 80 chr2 239594099 239594170 -11093684 - L1PA16 LINE L1 -518 5648 5574 2096 99 27 0 chr2 239594170 239594463 -11093391 + AluSq SINE Alu 1 301 -12 2432 90 10 80 chr2 239594463 239594618 -11093236 - L1PA16 LINE L1 -592 5574 5410 1914 135 17 0 chr2 239594618 239594915 -11092939 - AluSx SINE Alu -10 302 1 2432 90 10 80 chr2 239594915 239595000 -11092854 - L1PA16 LINE L1 -756 5410 5321 2134 98 3 0 chr2 239595000 239595323 -11092531 - AluSp SINE Alu 0 324 1 2432 90 10 80 chr2 239595323 239595500 -11092354 - L1PA16 LINE L1 -845 5321 5190 1396 184 15 46 chr2 239595499 239595632 -11092222 - L1ME2 LINE L1 -180 5984 5848 * 1776 153 3 3 chr2 239595632 239595927 -11091927 + AluJo SINE Alu 1 295 -17 1396 184 15 46 chr2 239595927 239596165 -11091689 - L1ME2 LINE L1 -316 5848 5579 307 224 0 0 chr2 239596162 239596220 -11091634 - L1ME LINE L1 -547 5617 5560 * 1486 135 18 0 chr2 239596224 239596453 -11091401 + MER50 LTR ERV1 2 234 -500 * 1511 167 11 19 chr2 239596433 239596703 -11091151 + MER50 LTR ERV1 430 697 -37 2079 206 34 85 chr2 239596720 239596888 -11090966 - L1ME LINE L1 -602 5560 5385 2041 122 0 7 chr2 239596888 239597191 -11090663 - AluSx SINE Alu -11 301 1 2079 206 34 85 chr2 239597191 239597235 -11090619 - L1ME LINE L1 -777 5385 5340 2194 110 10 0 chr2 239597235 239597543 -11090311 - AluSx SINE Alu -1 311 1 2149 112 3 0 chr2 239597547 239597851 -11090003 - AluSp SINE Alu -8 305 1 1145 173 117 60 chr2 239597854 239598137 -11089717 - AluJo SINE Alu -3 299 1 2079 206 34 85 chr2 239598137 239598286 -11089568 - L1ME LINE L1 -827 5335 5180 1760 103 43 60 chr2 239598286 239598586 -11089268 + AluSx SINE Alu 1 295 -17 2079 206 34 85 chr2 239598586 239598879 -11088975 - L1ME LINE L1 -982 5180 4874 2072 126 7 0 chr2 239598879 239599189 -11088665 - AluSx SINE Alu 0 312 1 1457 139 120 0 chr2 239599198 239599464 -11088390 - AluJo SINE Alu -14 298 1 2079 206 34 85 chr2 239599464 239599724 -11088130 - L1ME LINE L1 -1296 4866 4680 1916 133 10 7 chr2 239599724 239600025 -11087829 + AluJb SINE Alu 1 302 -10 2079 206 34 85 chr2 239600025 239600036 -11087818 - L1ME LINE L1 -1482 4680 4670 542 197 41 16 chr2 239600232 239600354 -11087500 - MIR SINE MIR -77 185 61 352 224 191 0 chr2 239601419 239601566 -11086288 - MER45A DNA AcHobo 0 178 4 2170 78 10 10 chr2 239601951 239602245 -11085609 + AluSx SINE Alu 1 294 -18 284 261 94 54 chr2 239602508 239602711 -11085143 + MLT1L LTR MaLR 313 500 -88 1929 115 7 0 chr2 239603153 239603431 -11084423 + AluSx SINE Alu 1 280 -32 1582 161 3 21 chr2 239603855 239604146 -11083708 - AluJo SINE Alu -20 292 7 785 151 71 0 chr2 239604186 239604312 -11083542 + AluSq/x SINE Alu 2 136 -176 1889 125 50 0 chr2 239604312 239604609 -11083245 + AluSx SINE Alu 1 312 0 555 109 9 55 chr2 239604779 239604889 -11082965 - AluSg/x SINE Alu 0 312 208 294 130 0 0 chr2 239604889 239604933 -11082921 - Alu SINE Alu -262 40 1 375 306 0 10 chr2 239605199 239605297 -11082557 + L2 LINE L2 2659 2755 -559 208 283 47 19 chr2 239605443 239605549 -11082305 + L2 LINE L2 2954 3062 -210 216 273 0 0 chr2 239605549 239605604 -11082250 - L2 LINE L2 -5 3308 3254 3524 156 43 45 chr2 239605985 239606439 -11081415 - L1MB7 LINE L1 0 6184 5731 1551 166 35 7 chr2 239606439 239606729 -11081125 + AluJo SINE Alu 1 298 -14 3524 156 43 45 chr2 239606729 239606923 -11080931 - L1MB7 LINE L1 -453 5731 5538 2375 84 0 0 chr2 239606923 239607231 -11080623 + AluY SINE Alu 1 308 -3 3524 156 43 45 chr2 239607231 239607276 -11080578 - L1MB7 LINE L1 -646 5538 5494 816 199 0 0 chr2 239607276 239607407 -11080447 - FLAM_C SINE Alu -2 131 1 3524 156 43 45 chr2 239607407 239607449 -11080405 - L1MB7 LINE L1 -690 5494 5448 674 129 0 10 chr2 239607456 239607557 -11080297 - FLAM_A SINE Alu -15 127 28 775 169 127 0 chr2 239607562 239607798 -11080056 - L1MB7 LINE L1 -729 5445 5188 2483 193 93 29 chr2 239607851 239608578 -11079276 - L1MB7 LINE L1 -1499 4647 3874 2098 125 0 0 chr2 239608588 239608892 -11078962 - AluSx SINE Alu -8 304 1 212 0 36 0 chr2 239608986 239609014 -11078840 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 236 194 0 0 chr2 239609065 239609101 -11078753 + Alu SINE Alu 1 36 -97 29 0 0 0 chr2 239609216 239609245 -11078609 + AT_rich Low_complexity Low_complexity 1 29 0 2397 62 0 3 chr2 239609250 239609559 -11078295 - AluY SINE Alu -3 308 1 341 240 62 21 chr2 239609657 239609753 -11078101 - L2 LINE L2 -19 3294 3195 597 155 0 26 chr2 239609961 239610077 -11077777 - FLAM_C SINE Alu -1 142 30 2462 55 0 13 chr2 239610094 239610404 -11077450 - AluY SINE Alu -5 306 1 2255 108 20 0 chr2 239610407 239610703 -11077151 - AluSx SINE Alu -10 302 1 2332 84 27 3 chr2 239611432 239611729 -11076125 - AluSq SINE Alu -9 304 1 827 184 296 5 chr2 239612295 239612501 -11075353 - AluJo SINE Alu -45 267 2 1753 153 25 4 chr2 239613242 239613517 -11074337 - AluSx SINE Alu -23 289 9 228 130 0 0 chr2 239613929 239613975 -11073879 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 388 282 110 25 chr2 239617096 239617259 -11070595 - MIR SINE MIR -8 254 78 288 278 44 0 chr2 239617556 239617646 -11070208 - L2 LINE L2 -5 3308 3215 348 172 0 0 chr2 239619246 239619333 -11068521 + (CAT)n Simple_repeat Simple_repeat 3 89 0 2249 86 20 20 chr2 239619548 239619852 -11068002 + AluSq SINE Alu 1 304 -9 240 172 0 0 chr2 239620091 239620149 -11067705 + (CAT)n Simple_repeat Simple_repeat 1 58 0 180 222 0 0 chr2 239620198 239620270 -11067584 + (CAT)n Simple_repeat Simple_repeat 3 74 0 304 274 168 0 chr2 239620832 239620945 -11066909 + MIR SINE MIR 107 238 -24 205 190 13 51 chr2 239623137 239623216 -11064638 + (CGGGG)n Simple_repeat Simple_repeat 5 80 0 919 110 62 0 chr2 239624111 239624257 -11063597 + AluSg/x SINE Alu 135 289 -20 1969 150 13 3 chr2 239624268 239624575 -11063279 + AluJb SINE Alu 1 310 -2 488 237 136 12 chr2 239624679 239624848 -11063006 - MIR SINE MIR -3 259 70 785 162 113 0 chr2 239624889 239625031 -11062823 - AluJb SINE Alu -18 294 137 644 263 216 12 chr2 239625076 239625563 -11062291 - L1MC4a LINE L1 -1641 6167 5582 338 297 9 0 chr2 239626061 239626172 -11061682 - LTR33A LTR ERVL 0 523 412 832 199 0 0 chr2 239627383 239627524 -11060330 - AluJb SINE Alu -37 275 135 2361 93 0 13 chr2 239627525 239627838 -11060016 - AluY SINE Alu -2 309 1 289 185 108 0 chr2 239628561 239628626 -11059228 - MLT1A1 LTR MaLR 0 365 294 439 0 0 0 chr2 239628626 239628678 -11059176 + L1PA3 LINE L1 6100 6151 -4 228 86 0 0 chr2 239628682 239628717 -11059137 + (A)n Simple_repeat Simple_repeat 1 35 0 1146 226 57 7 chr2 239628717 239629013 -11058841 - MLT1A1 LTR MaLR -54 311 1 2102 98 18 7 chr2 239629337 239629613 -11058241 + AluSg SINE Alu 10 288 -22 648 129 100 14 chr2 239629634 239629774 -11058080 + MER96B DNA MER1_type? 8 159 -258 1981 145 10 10 chr2 239629774 239630078 -11057776 - AluJb SINE Alu -8 304 1 1254 112 0 17 chr2 239630102 239630280 -11057574 - AluSg/x SINE Alu -4 306 132 2088 106 36 40 chr2 239630280 239630582 -11057272 - AluSx SINE Alu -11 301 1 1098 157 80 4 chr2 239630583 239630832 -11057022 + MER96B DNA MER1_type? 150 417 0 262 243 154 56 chr2 239630840 239631107 -11056747 + L2 LINE L2 2871 3163 -109 2213 107 0 0 chr2 239631138 239631419 -11056435 + AluSp SINE Alu 1 281 -32 729 155 0 0 chr2 239631424 239631553 -11056301 + GA-rich Low_complexity Low_complexity 2 130 0 788 112 8 0 chr2 239631553 239631678 -11056176 + L1MB2 LINE L1 5485 5610 -573 2143 128 13 0 chr2 239631678 239631984 -11055870 + AluSx SINE Alu 1 310 -2 662 114 0 35 chr2 239631985 239632099 -11055755 + L1MB2 LINE L1 5816 5925 -246 1123 133 11 28 chr2 239632210 239632390 -11055464 + AluSg/x SINE Alu 130 306 -6 1766 189 3 0 chr2 239632913 239633220 -11054634 - AluJb SINE Alu -4 308 1 2382 95 0 10 chr2 239633230 239633536 -11054318 - AluSx SINE Alu -9 303 1 331 274 100 75 chr2 239633536 239633769 -11054085 + L1M4 LINE L1 3078 3319 -2827 1004 126 16 60 chr2 239633779 239633962 -11053892 - FRAM SINE Alu -1 175 1 1493 148 0 0 chr2 239633998 239634208 -11053646 + AluSg/x SINE Alu 86 295 -15 959 170 19 0 chr2 239634252 239634411 -11053443 + FRAM SINE Alu 1 161 -15 1226 183 41 123 chr2 239634805 239634876 -11052978 + LTR1B LTR ERV1 333 408 -612 2265 64 0 88 chr2 239634876 239635206 -11052648 - AluSc SINE Alu -4 305 5 1226 183 41 123 chr2 239635206 239635602 -11052252 + LTR1B LTR ERV1 408 963 -57 476 217 17 8 chr2 239635662 239635782 -11052072 + LTR28 LTR ERV1 900 1020 0 2525 39 3 19 chr2 239636332 239636639 -11051215 + AluY SINE Alu 1 302 -9 1827 155 40 3 chr2 239636831 239637127 -11050727 + AluJo SINE Alu 1 307 -5 1966 132 52 0 chr2 239637156 239637445 -11050409 + AluJo SINE Alu 1 304 -8 239 244 64 0 chr2 239637933 239638011 -11049843 - L1MC/D LINE L1 -1981 5827 5745 735 87 0 0 chr2 239638251 239638343 -11049511 + AluS SINE Alu 1 92 -221 395 148 0 0 chr2 239638501 239638562 -11049292 + LTR33A LTR ERVL 463 523 0 1380 101 9 8 chr2 239638666 239638991 -11048863 - MLT1B LTR MaLR 0 390 1 588 234 19 44 chr2 239639053 239639203 -11048651 - L1MC/D LINE L1 -2318 5490 5345 2552 195 30 11 chr2 239639203 239639369 -11048485 + MER70A LTR ERVL 1 162 -310 2465 77 0 3 chr2 239639369 239639666 -11048188 + AluSq SINE Alu 11 306 -7 2552 195 30 11 chr2 239639666 239639961 -11047893 + MER70A LTR ERVL 162 471 -1 588 234 19 44 chr2 239639961 239640015 -11047839 - L1MC/D LINE L1 -2463 5345 5291 2311 102 0 3 chr2 239640287 239640590 -11047264 + AluSg SINE Alu 1 302 -8 425 314 40 57 chr2 239640590 239640729 -11047125 - L1MC/D LINE L1 -1045 5101 4966 1815 141 42 18 chr2 239640729 239641013 -11046841 + AluJb SINE Alu 2 292 -20 425 314 40 57 chr2 239641013 239641121 -11046733 - L1MC/D LINE L1 -1180 4966 4858 217 314 98 36 chr2 239641121 239641395 -11046459 + L2 LINE L2 1296 1586 -1728 2227 110 30 0 chr2 239641400 239641701 -11046153 - AluSx SINE Alu -2 310 1 323 259 35 0 chr2 239642667 239642752 -11045102 + MER77 LTR ERV1 298 385 -220 273 273 149 13 chr2 239642767 239642921 -11044933 + MER77 LTR ERV1 340 514 -91 553 199 93 33 chr2 239643683 239643834 -11044020 + Charlie4 DNA MER1_type 18 177 -1784 1822 195 18 77 chr2 239643884 239644012 -11043842 + MER82 DNA MER2_type 7 141 -512 2137 121 3 25 chr2 239644012 239644327 -11043527 - AluSx SINE Alu -4 308 1 1822 195 18 77 chr2 239644327 239644424 -11043430 + MER82 DNA MER2_type 141 242 -411 2153 116 7 7 chr2 239644424 239644718 -11043136 - AluSq SINE Alu -19 294 1 1822 195 18 77 chr2 239644718 239644917 -11042937 + MER82 DNA MER2_type 242 402 -251 2455 77 0 7 chr2 239644917 239645215 -11042639 + AluSg SINE Alu 1 296 -14 1822 195 18 77 chr2 239645215 239645280 -11042574 + MER82 DNA MER2_type 402 469 -184 2392 75 27 0 chr2 239645284 239645577 -11042277 + AluSg SINE Alu 1 301 -9 3197 88 24 4 chr2 239645578 239646109 -11041745 - LTR9B LTR ERV1 -65 579 1 695 208 0 8 chr2 239646350 239646475 -11041379 + FLAM_C SINE Alu 2 125 -18 276 159 0 0 chr2 239646505 239646549 -11041305 - LTR7 LTR ERV1 0 450 407 301 250 110 70 chr2 239646988 239647177 -11040677 - L1M2 LINE L1 -4905 1944 1745 1166 229 62 11 chr2 239647177 239647452 -11040402 + AluJo SINE Alu 1 289 -13 1911 146 29 0 chr2 239647477 239647758 -11040096 + AluSx SINE Alu 1 289 -23 422 100 100 0 chr2 239647787 239647857 -11039997 + AluJ/FRAM SINE Alu 217 293 -19 899 132 0 0 chr2 239647883 239648004 -11039850 + FLAM_C SINE Alu 1 121 -12 2562 71 3 0 chr2 239648657 239648967 -11038887 - AluY SINE Alu 0 311 1 24 0 0 0 chr2 239649239 239649263 -11038591 + AT_rich Low_complexity Low_complexity 1 24 0 1620 179 0 54 chr2 239649617 239649780 -11038074 - AluJb SINE Alu -16 296 126 203 0 37 0 chr2 239649780 239649807 -11038047 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2238 83 7 0 chr2 239649807 239650083 -11037771 - AluSg SINE Alu -28 282 5 1620 179 0 54 chr2 239650083 239650231 -11037623 - AluJb SINE Alu -184 128 1 22 56 0 0 chr2 239650233 239650269 -11037585 + AT_rich Low_complexity Low_complexity 1 36 0 1670 137 119 7 chr2 239650453 239650730 -11037124 + AluSg1 SINE Alu 1 308 -1 2269 115 7 0 chr2 239651351 239651656 -11036198 + AluSp SINE Alu 1 307 -6 2180 129 3 19 chr2 239651657 239651968 -11035886 + AluSx SINE Alu 2 307 -5 1374 143 40 16 chr2 239652095 239652347 -11035507 + MER46B DNA MER2_type 102 234 -2 2059 141 3 0 chr2 239652633 239652930 -11034924 + AluSq SINE Alu 5 302 -11 321 184 161 0 chr2 239653316 239653403 -11034451 - L1MA9 LINE L1 -34 6278 6178 199 329 41 0 chr2 239653600 239653673 -11034181 + MIR SINE MIR 32 107 -155 301 29 0 0 chr2 239653693 239653728 -11034126 - U6 snRNA snRNA -72 35 1 298 288 32 56 chr2 239653730 239653809 -11034045 + MIR SINE MIR 125 201 -61 3588 102 41 4 chr2 239653809 239654317 -11033537 - MER1A DNA MER1_type 0 527 1 298 288 32 56 chr2 239654317 239654362 -11033492 + MIR SINE MIR 201 246 -16 25 31 0 0 chr2 239654526 239654558 -11033296 + AT_rich Low_complexity Low_complexity 1 32 0 435 245 60 65 chr2 239654688 239654904 -11032950 - L1M4 LINE L1 -2315 3831 3617 1894 124 47 0 chr2 239654929 239655227 -11032627 - AluSx SINE Alu 0 312 1 195 42 0 0 chr2 239655704 239655728 -11032126 + (A)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr2 239657235 239657263 -11030591 + AT_rich Low_complexity Low_complexity 1 28 0 1762 198 61 15 chr2 239657507 239657902 -11029952 + MER39 LTR ERV1 294 706 -1 278 198 241 2 chr2 239658041 239658228 -11029626 + L1M2 LINE L1 5272 5518 -726 243 242 63 21 chr2 239658228 239658323 -11029531 + L1ME LINE L1 5538 5636 -526 1259 129 43 106 chr2 239658399 239658673 -11029181 - AluJb SINE Alu 0 312 50 972 211 66 35 chr2 239658673 239658901 -11028953 + AluSg/x SINE Alu 65 299 -11 358 222 145 81 chr2 239658920 239658991 -11028863 - L1MC5 LINE L1 -385 7576 7511 1424 158 77 29 chr2 239658991 239659264 -11028590 - AluJb SINE Alu -26 286 1 358 222 145 81 chr2 239659264 239659489 -11028365 - L1MC5 LINE L1 -450 7511 7261 2456 77 0 40 chr2 239659638 239659964 -11027890 - AluSq SINE Alu -3 310 1 2341 104 3 0 chr2 239660017 239660314 -11027540 - AluSx SINE Alu -14 298 1 243 261 101 0 chr2 239660339 239660458 -11027396 + L1ME4a LINE L1 5959 6089 -32 296 167 0 0 chr2 239660887 239660941 -11026913 + L2 LINE L2 3254 3307 -6 975 127 0 8 chr2 239661612 239661746 -11026108 + FLAM_C SINE Alu 1 133 -10 186 43 0 0 chr2 239661747 239661770 -11026084 + (TAAAA)n Simple_repeat Simple_repeat 5 27 0 325 295 98 0 chr2 239661975 239662087 -11025767 - LTR67 LTR ERVL -3 554 432 1616 191 13 13 chr2 239662895 239663198 -11024656 + AluJo SINE Alu 1 303 -9 1096 109 33 0 chr2 239664779 239664962 -11022892 - L1MB2 LINE L1 -7 6164 5976 354 208 13 26 chr2 239664974 239665051 -11022803 + L1ME4a LINE L1 6035 6110 -11 294 264 16 124 chr2 239665747 239665797 -11022057 - MIR SINE MIR -59 149 95 2352 84 0 7 chr2 239665797 239666094 -11021760 + AluSx SINE Alu 1 295 -17 294 264 16 124 chr2 239666094 239666172 -11021682 - MIR SINE MIR -113 95 35 426 139 0 0 chr2 239667437 239667509 -11020345 + (CA)n Simple_repeat Simple_repeat 2 73 0 2073 119 33 13 chr2 239668881 239669183 -11018671 + AluJb SINE Alu 1 308 -4 741 176 0 0 chr2 239669280 239669405 -11018449 + MER45A DNA AcHobo 40 164 -14 234 0 0 0 chr2 239669493 239669519 -11018335 + (CA)n Simple_repeat Simple_repeat 2 27 0 288 250 13 0 chr2 239670600 239670676 -11017178 - HsTC2 DNA Tc2 -10 1888 1812 2152 133 13 0 chr2 239670706 239671007 -11016847 + AluSx SINE Alu 6 310 -2 396 239 67 1 chr2 239671174 239671314 -11016540 + MIR SINE MIR 4 151 -57 235 111 0 0 chr2 239672159 239672195 -11015659 - MIR SINE MIR -118 144 109 190 345 46 0 chr2 239672960 239673047 -11014807 - MER5A DNA MER1_type -49 140 50 338 314 88 0 chr2 239673137 239673274 -11014580 + MIR SINE MIR 106 254 -8 353 170 20 20 chr2 239673710 239673810 -11014044 + (CA)n Simple_repeat Simple_repeat 2 101 0 329 357 81 11 chr2 239674962 239675147 -11012707 + MIR SINE MIR 22 219 -43 2042 119 35 32 chr2 239675958 239676270 -11011584 - AluSq SINE Alu 0 313 1 292 200 0 0 chr2 239676285 239676350 -11011504 - L1MC4 LINE L1 -1 8041 7977 298 163 0 0 chr2 239676363 239676412 -11011442 - L1MC4 LINE L1 -159 7883 7835 480 243 95 27 chr2 239676515 239676663 -11011191 - MER97b DNA MER1_type? -875 178 21 1948 137 7 0 chr2 239677035 239677347 -11010507 - AluJb SINE Alu 0 322 9 309 336 53 0 chr2 239677349 239677462 -11010392 - LTR67 LTR ERVL -5 552 434 1974 138 7 14 chr2 239677964 239678261 -11009593 - AluJb SINE Alu -17 295 1 1666 180 49 175 chr2 239678266 239678707 -11009147 - L1MC4 LINE L1 -828 7214 6719 1796 181 0 0 chr2 239678707 239678995 -11008859 + AluJb SINE Alu 17 304 -8 2206 100 7 3 chr2 239678995 239679284 -11008570 + AluSq SINE Alu 1 290 -23 1666 180 49 175 chr2 239679284 239679504 -11008350 - L1MC4 LINE L1 -1322 6720 6656 1526 127 24 133 chr2 239679504 239679699 -11008155 - AluYb8 SINE Alu -6 302 158 4427 80 39 48 chr2 239679699 239680323 -11007531 - SVA Other Other -1 1385 768 1526 127 24 133 chr2 239680323 239680466 -11007388 - AluYb8 SINE Alu -150 158 1 1666 180 49 175 chr2 239680466 239680558 -11007296 - L1MC4 LINE L1 -1386 6656 6554 307 358 79 31 chr2 239680768 239680913 -11006941 + L1ME LINE L1 5511 5672 -449 1701 132 95 15 chr2 239680913 239681186 -11006668 + AluSx SINE Alu 1 295 -17 307 358 79 31 chr2 239681186 239681269 -11006585 + L1ME LINE L1 5672 5750 -371 1358 140 25 0 chr2 239681780 239682014 -11005840 - AluSg/x SINE Alu 0 310 84 1966 137 7 14 chr2 239682016 239682184 -11005670 - AluJb SINE Alu -11 301 133 186 43 0 0 chr2 239682184 239682207 -11005647 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2230 67 0 0 chr2 239682208 239682475 -11005379 - AluY SINE Alu -5 306 40 1966 137 7 14 chr2 239682475 239682589 -11005265 - AluJb SINE Alu -178 134 19 1378 162 0 0 chr2 239682599 239682827 -11005027 + Tigger2 DNA MER2_type 2491 2718 0 968 68 0 0 chr2 239682846 239682963 -11004891 + AluY SINE Alu 175 291 -20 744 205 39 0 chr2 239683362 239683518 -11004336 + MLT1F LTR MaLR 5 166 -376 4443 150 33 27 chr2 239683524 239684383 -11003471 + L1MB3 LINE L1 5319 6182 -1 1580 159 137 26 chr2 239684392 239684743 -11003111 + MLT1F LTR MaLR 152 541 -1 2713 178 68 32 chr2 239684743 239685304 -11002550 + L1MB8 LINE L1 5526 6114 -64 2404 98 3 0 chr2 239685304 239685611 -11002243 + AluSp SINE Alu 1 308 -5 2713 178 68 32 chr2 239685611 239685678 -11002176 + L1MB8 LINE L1 6114 6177 -1 1895 134 88 0 chr2 239685682 239685966 -11001888 + AluSx SINE Alu 3 311 -1 2207 80 0 80 chr2 239686103 239686271 -11001583 - AluY SINE Alu -10 301 170 2517 71 0 0 chr2 239686271 239686568 -11001286 - AluY SINE Alu -14 297 1 2207 80 0 80 chr2 239686568 239686726 -11001128 - AluY SINE Alu -141 170 1 1925 182 20 23 chr2 239687406 239687797 -11000057 - MLT1B LTR MaLR 0 390 1 1889 140 0 88 chr2 239688259 239688464 -10999390 - AluSx SINE Alu 0 312 145 2522 74 0 13 chr2 239688464 239688775 -10999079 - AluY SINE Alu -4 307 1 1889 140 0 88 chr2 239688775 239688897 -10998957 - AluSx SINE Alu -167 145 14 1046 119 137 107 chr2 239688901 239688995 -10998859 + MLT2C1 LTR ERVL 28 118 -279 1881 164 0 20 chr2 239688995 239689333 -10998521 - AluJb SINE Alu 0 312 1 1046 119 137 107 chr2 239689333 239689508 -10998346 + MLT2C1 LTR ERVL 118 268 -129 2136 153 0 0 chr2 239689508 239689808 -10998046 + AluSx SINE Alu 1 300 -12 1046 119 137 107 chr2 239689808 239689885 -10997969 + MLT2C1 LTR ERVL 268 341 -56 223 280 0 0 chr2 239689886 239689936 -10997918 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 196 281 88 42 chr2 239690369 239690561 -10997293 + L2 LINE L2 2857 3057 -215 369 204 26 106 chr2 239690642 239690755 -10997099 + MLT1J LTR MaLR 235 338 -173 220 288 169 8 chr2 239690822 239690940 -10996914 + L2 LINE L2 3136 3272 0 682 191 8 0 chr2 239691664 239691795 -10996059 + FAM SINE Alu 1 49 0 2355 108 0 0 chr2 239691801 239692098 -10995756 + AluSq SINE Alu 1 297 -16 2541 72 3 7 chr2 239692098 239692405 -10995449 + AluSp SINE Alu 1 306 -7 702 151 79 0 chr2 239692411 239692537 -10995317 + AluJb SINE Alu 1 136 -176 555 276 0 65 chr2 239692585 239692770 -10995084 + MLT1J LTR MaLR 228 400 -111 389 259 86 49 chr2 239692905 239693067 -10994787 - MLT1I LTR MaLR -230 179 12 2369 106 3 0 chr2 239693080 239693391 -10994463 + AluSp SINE Alu 1 312 -1 2163 136 3 0 chr2 239693400 239693710 -10994144 + AluSq SINE Alu 3 313 0 1536 147 70 86 chr2 239693855 239694169 -10993685 - AluJo SINE Alu -3 309 1 344 230 27 0 chr2 239694189 239694263 -10993591 + MIR SINE MIR 186 261 -1 461 267 119 76 chr2 239694349 239694918 -10992936 - L1MEd LINE L1 -4934 1185 592 1819 159 44 29 chr2 239695292 239695457 -10992397 + MLT1B LTR MaLR 2 163 -227 2243 132 0 3 chr2 239695457 239695761 -10992093 + AluSx SINE Alu 1 303 -9 1819 159 44 29 chr2 239695761 239695978 -10991876 + MLT1B LTR MaLR 163 390 0 1536 184 28 28 chr2 239696991 239697297 -10990557 + AluJb SINE Alu 1 306 0 2373 98 7 3 chr2 239697298 239697603 -10990251 + AluSq SINE Alu 1 306 -7 1362 111 0 0 chr2 239697603 239697783 -10990071 + AluSp SINE Alu 134 313 0 2357 97 3 3 chr2 239698143 239698454 -10989400 - AluSx SINE Alu -1 311 1 321 326 67 6 chr2 239699339 239699517 -10988337 - MER5A DNA MER1_type 0 189 1 342 282 174 0 chr2 239699540 239699735 -10988119 + MIR SINE MIR 32 260 -2 2718 26 23 0 chr2 239699830 239700138 -10987716 + AluYb8 SINE Alu 1 315 -3 2364 101 0 13 chr2 239700165 239700481 -10987373 + AluSx SINE Alu 1 312 0 182 62 31 0 chr2 239700489 239700521 -10987333 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 1797 163 3 37 chr2 239700535 239700835 -10987019 + AluSg SINE Alu 1 290 -20 2435 88 23 0 chr2 239701243 239701549 -10986305 + AluSp SINE Alu 1 313 0 1082 82 0 0 chr2 239701556 239701690 -10986164 + AluSx SINE Alu 1 134 -179 435 19 0 0 chr2 239702244 239702296 -10985558 + (TAA)n Simple_repeat Simple_repeat 1 52 0 2248 113 3 0 chr2 239702297 239702628 -10985226 + AluSx SINE Alu 1 312 0 1206 128 0 17 chr2 239702630 239702809 -10985045 + AluSx SINE Alu 136 311 -1 366 206 0 0 chr2 239702812 239702880 -10984974 + MLT1I LTR MaLR 321 388 -21 32 0 0 0 chr2 239702962 239702994 -10984860 + AT_rich Low_complexity Low_complexity 1 32 0 2064 110 0 10 chr2 239702994 239703284 -10984570 - AluSg SINE Alu 0 310 24 2405 98 0 0 chr2 239703286 239703582 -10984272 - AluSq SINE Alu -17 296 1 350 250 65 40 chr2 239703644 239703768 -10984086 + L1ME4a LINE L1 5831 5957 -164 236 119 0 0 chr2 239703805 239703847 -10984007 - AluSx SINE Alu -4 296 255 1527 108 0 0 chr2 239703848 239704042 -10983812 - AluSx SINE Alu -117 195 2 368 294 46 20 chr2 239704102 239704255 -10983599 + L1ME4a LINE L1 5963 6119 -2 2237 107 3 0 chr2 239704503 239704793 -10983061 + AluSq SINE Alu 1 291 -22 684 174 21 7 chr2 239704889 239705033 -10982821 + L1MB5 LINE L1 6008 6153 -21 2150 125 7 0 chr2 239705863 239706159 -10981695 - AluSq SINE Alu -11 302 5 2284 110 0 3 chr2 239706251 239706551 -10981303 + AluSx SINE Alu 1 299 -13 472 219 112 140 chr2 239706586 239706645 -10981209 - MLT1H LTR MaLR -1 548 489 2009 118 10 27 chr2 239706645 239706941 -10980913 + AluSx SINE Alu 1 291 -21 282 56 0 0 chr2 239706946 239706982 -10980872 + (TTA)n Simple_repeat Simple_repeat 3 38 0 472 219 112 140 chr2 239706982 239707010 -10980844 - MLT1H LTR MaLR -64 485 458 2848 157 2 38 chr2 239707010 239707047 -10980807 - MER66B LTR ERV1 0 486 449 2632 65 0 0 chr2 239707047 239707353 -10980501 + AluY SINE Alu 1 306 -5 2848 157 2 38 chr2 239707353 239707586 -10980268 - MER66B LTR ERV1 -37 449 240 2330 114 0 0 chr2 239707586 239707885 -10979969 + AluSc SINE Alu 1 299 -10 2848 157 2 38 chr2 239707885 239708117 -10979737 - MER66B LTR ERV1 -246 240 1 472 219 112 140 chr2 239708117 239708514 -10979340 - MLT1H LTR MaLR -91 458 71 1801 161 3 7 chr2 239708538 239708829 -10979025 + AluJb SINE Alu 1 290 -22 2008 168 45 18 chr2 239709023 239709403 -10978451 + MLT1B LTR MaLR 1 390 0 494 216 43 62 chr2 239709408 239709570 -10978284 - MER103 DNA DNA -1 165 7 2139 127 0 16 chr2 239709574 239709890 -10977964 - AluSx SINE Alu -3 309 1 488 168 84 73 chr2 239709900 239710079 -10977775 - MLT1D LTR MaLR -209 189 6 2327 67 251 3 chr2 239711381 239711740 -10976114 + LTR7 LTR ERV1 1 448 -2 4470 143 23 37 chr2 239712042 239712084 -10975770 - MER4D LTR ERV1 -8 895 854 2503 50 0 0 chr2 239712084 239712382 -10975472 + AluY SINE Alu 1 298 -13 4470 143 23 37 chr2 239712382 239712623 -10975231 - MER4D LTR ERV1 -49 854 611 2143 119 3 0 chr2 239712623 239712926 -10974928 - AluSx SINE Alu -8 304 1 4470 143 23 37 chr2 239712926 239713080 -10974774 - MER4D LTR ERV1 -292 611 456 2216 108 0 0 chr2 239713080 239713377 -10974477 - AluSq SINE Alu -16 297 1 4470 143 23 37 chr2 239713377 239713845 -10974009 - MER4D LTR ERV1 -447 456 1 231 305 63 5 chr2 239714403 239714593 -10973261 - L1M4 LINE L1 -748 5398 5198 243 0 0 0 chr2 239714606 239714633 -10973221 + (T)n Simple_repeat Simple_repeat 1 27 0 2242 119 3 0 chr2 239714669 239714980 -10972874 + AluSx SINE Alu 1 312 0 360 111 0 0 chr2 239715028 239715082 -10972772 + (TC)n Simple_repeat Simple_repeat 1 54 0 362 103 0 175 chr2 239716358 239716417 -10971437 + MIR SINE MIR 108 145 -117 2079 145 7 0 chr2 239716417 239716727 -10971127 + AluSx SINE Alu 1 312 0 362 103 0 175 chr2 239716727 239716764 -10971090 + MIR SINE MIR 145 187 -75 665 237 169 60 chr2 239716828 239717057 -10970797 - MLT1B LTR MaLR -2 388 107 2083 128 7 0 chr2 239717057 239717361 -10970493 - AluSp SINE Alu -5 308 3 665 237 169 60 chr2 239717361 239717481 -10970373 - MLT1B LTR MaLR -283 107 1 309 301 122 33 chr2 239717856 239718069 -10969785 - MLT1L LTR MaLR -8 607 376 7993 54 9 0 chr2 239718632 239719592 -10968262 + LTR5 LTR ERVK 1 969 0 2306 62 0 10 chr2 239719887 239720175 -10967679 - AluY SINE Alu -15 296 12 612 132 11 0 chr2 239720218 239720309 -10967545 + FLAM_C SINE Alu 24 115 -28 458 289 21 21 chr2 239720316 239720458 -10967396 + MIR SINE MIR 81 222 -40 965 149 0 11 chr2 239720693 239720821 -10967033 + (CAT)n Simple_repeat Simple_repeat 1 128 -51 2243 78 3 7 chr2 239720821 239721116 -10966738 - AluSp SINE Alu -18 295 2 965 149 0 11 chr2 239721116 239721168 -10966686 + (CAT)n Simple_repeat Simple_repeat 128 179 0 1176 117 0 8 chr2 239721145 239721724 -10966130 + (CACCAT)n Simple_repeat Simple_repeat 1 574 0 464 252 162 44 chr2 239721813 239722078 -10965776 - MER21B LTR ERV1 -103 760 449 2240 124 0 0 chr2 239722078 239722385 -10965469 + AluSx SINE Alu 1 307 -5 464 252 162 44 chr2 239722385 239722440 -10965414 - MER21B LTR ERV1 -414 449 402 566 139 0 10 chr2 239722440 239722541 -10965313 + (GAA)n Simple_repeat Simple_repeat 2 101 0 567 241 82 98 chr2 239722541 239722869 -10964985 - MER21B LTR ERV1 -451 412 90 716 219 56 19 chr2 239722919 239722956 -10964898 + FAM SINE Alu 9 43 -278 4533 96 40 52 chr2 239722956 239723654 -10964200 + LTR8 LTR ERV1 1 690 -1 716 219 56 19 chr2 239723654 239723776 -10964078 + FAM SINE Alu 43 174 -11 2148 88 32 0 chr2 239723810 239724095 -10963759 + AluSx SINE Alu 1 294 -18 226 135 173 0 chr2 239724100 239724152 -10963702 + AluS SINE Alu 1 61 -239 666 213 8 0 chr2 239724152 239724279 -10963575 + AluSg/x SINE Alu 171 298 -14 322 227 0 0 chr2 239724279 239724345 -10963509 - MER21B LTR ERV1 -792 71 6 705 231 19 0 chr2 239724351 239724511 -10963343 - MIR SINE MIR -98 164 2 322 184 229 0 chr2 239724674 239724783 -10963071 + MER63A DNA MER1_type 50 183 -27 284 253 44 0 chr2 239725138 239725229 -10962625 - L1MEd LINE L1 -5966 153 59 2390 78 3 0 chr2 239725372 239725679 -10962175 - AluSx SINE Alu -4 308 1 426 234 23 70 chr2 239725806 239725977 -10961877 + MLT1K LTR MaLR 14 176 -412 502 296 101 44 chr2 239726024 239726342 -10961512 + MLT1K LTR MaLR 251 586 -2 921 187 7 0 chr2 239726388 239726543 -10961311 - FRAM SINE Alu -9 157 2 1317 206 77 21 chr2 239726549 239726861 -10960993 - AluSq SINE Alu 0 303 1 981 194 0 0 chr2 239726861 239727016 -10960838 - FRAM SINE Alu -11 155 1 2040 110 0 39 chr2 239727175 239727484 -10960370 + AluSq SINE Alu 1 297 -16 1372 90 0 0 chr2 239727484 239727662 -10960192 + AluSg/x SINE Alu 134 311 -1 2102 129 0 7 chr2 239728233 239728535 -10959319 + AluSx SINE Alu 1 300 -12 2321 81 3 0 chr2 239728535 239728829 -10959025 + AluSp SINE Alu 1 296 -17 22 35 0 0 chr2 239728941 239728970 -10958884 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr2 239729040 239729068 -10958786 + AT_rich Low_complexity Low_complexity 1 28 0 2150 103 14 0 chr2 239729175 239729467 -10958387 - AluSp SINE Alu -17 296 1 199 281 24 12 chr2 239729467 239729543 -10958311 + L3 LINE CR1 792 868 -709 1924 155 10 0 chr2 239729652 239729956 -10957898 + AluJo SINE Alu 1 307 -5 529 149 0 19 chr2 239729958 239730065 -10957789 + (GGGAA)n Simple_repeat Simple_repeat 1 105 0 273 210 0 32 chr2 239730066 239730128 -10957726 + GA-rich Low_complexity Low_complexity 4 63 0 397 165 61 17 chr2 239730128 239730217 -10957637 + L1MA9 LINE L1 6163 6260 -52 2221 95 3 0 chr2 239730217 239730511 -10957343 + AluSg SINE Alu 1 295 -15 397 165 61 17 chr2 239730511 239730536 -10957318 + L1MA9 LINE L1 6260 6282 -30 318 156 47 0 chr2 239730626 239730690 -10957164 + MIR SINE MIR 86 152 -110 201 250 0 19 chr2 239730751 239730803 -10957051 + L3 LINE CR1 1445 1495 -82 743 236 42 90 chr2 239730818 239731242 -10956612 - MLT1J LTR MaLR -8 503 100 861 147 45 6 chr2 239731290 239731467 -10956387 - LTR54 LTR ERV1 0 510 327 1292 169 33 0 chr2 239731467 239731680 -10956174 + AluJo SINE Alu 1 220 -92 230 180 0 115 chr2 239731688 239731749 -10956105 - LTR54 LTR ERV1 -272 238 185 1337 184 73 11 chr2 239731749 239732010 -10955844 + AluJb SINE Alu 23 299 -13 838 119 0 4 chr2 239732012 239732232 -10955622 + AluSx SINE Alu 3 309 -3 554 211 0 18 chr2 239732271 239732385 -10955469 - LTR54 LTR ERV1 -398 112 1 1942 137 0 33 chr2 239732890 239733197 -10954657 - AluJo SINE Alu -15 297 1 440 319 102 8 chr2 239733228 239733463 -10954391 + MIR SINE MIR 4 260 -2 2389 70 3 3 chr2 239733529 239733830 -10954024 - AluSp SINE Alu -12 301 1 2117 117 10 0 chr2 239734106 239734406 -10953448 - AluSx SINE Alu -9 303 1 341 364 169 5 chr2 239736496 239736691 -10951163 + MIR SINE MIR 36 262 0 493 236 9 0 chr2 239736743 239736849 -10951005 + MER81 DNA DNA 8 114 0 277 343 29 0 chr2 239736970 239737110 -10950744 - MER91A DNA MER1_type -52 144 1 567 244 154 29 chr2 239737146 239737262 -10950592 + MER102b DNA MER1_type 1 101 -1327 2128 119 0 10 chr2 239737262 239737564 -10950290 + AluSx SINE Alu 1 299 -13 567 244 154 29 chr2 239737564 239737726 -10950128 + MER102b DNA MER1_type 101 314 -27 1750 106 67 14 chr2 239737827 239738109 -10949745 - AluSx SINE Alu -15 297 1 2270 98 0 0 chr2 239738401 239738697 -10949157 - AluSx SINE Alu -16 296 1 2296 97 3 0 chr2 239738717 239739027 -10948827 - AluSx SINE Alu -1 311 1 312 267 27 0 chr2 239739027 239739102 -10948752 - L2 LINE L2 -10 3303 3227 331 306 25 13 chr2 239739289 239739446 -10948408 - MLT1K LTR MaLR -272 316 158 698 228 163 5 chr2 239739504 239739706 -10948148 + MIR SINE MIR 8 241 -21 777 157 14 0 chr2 239740191 239740331 -10947523 - FLAM_C SINE Alu 0 143 2 2252 72 28 3 chr2 239740359 239740650 -10947204 + AluSq SINE Alu 1 298 -15 876 225 93 69 chr2 239741330 239741762 -10946092 + MER34B LTR ERV1 10 431 -111 234 186 0 0 chr2 239741769 239741812 -10946042 + MER57A LTR ERV1 295 337 -66 2053 148 0 0 chr2 239741874 239742178 -10945676 - AluSx SINE Alu 0 312 9 376 185 22 0 chr2 239742189 239742281 -10945573 + MER34 LTR ERV1 449 542 0 706 270 171 14 chr2 239742810 239743173 -10944681 + LTR16A LTR ERVL 22 441 -9 21 0 0 0 chr2 239743359 239743380 -10944474 + AT_rich Low_complexity Low_complexity 1 21 0 1685 145 14 17 chr2 239743766 239744085 -10943769 + AluJo SINE Alu 5 312 0 2255 103 3 0 chr2 239744462 239744763 -10943091 - AluSx SINE Alu -9 303 2 404 344 68 23 chr2 239744851 239745203 -10942651 - MLT1K LTR MaLR 0 588 221 304 130 54 0 chr2 239746587 239746679 -10941175 + (CCCGG)n Simple_repeat Simple_repeat 4 100 0 25 0 0 0 chr2 239746937 239746962 -10940892 + GC_rich Low_complexity Low_complexity 1 25 0 220 354 63 0 chr2 239748031 239748110 -10939744 - MIR SINE MIR -96 166 83 653 186 102 113 chr2 239748198 239748273 -10939581 - MER45A DNA AcHobo -1403 178 104 2081 128 7 3 chr2 239748273 239748577 -10939277 + AluSx SINE Alu 1 305 -7 2250 107 0 0 chr2 239748586 239748884 -10938970 + AluSx SINE Alu 1 298 -14 653 186 102 113 chr2 239748884 239748975 -10938879 - MER45A DNA AcHobo -1485 96 4 661 212 93 124 chr2 239749637 239749850 -10938004 + LTR16A LTR ERVL 63 261 -189 2327 80 0 0 chr2 239749850 239750162 -10937692 + AluSx SINE Alu 3 314 0 661 212 93 124 chr2 239750162 239750343 -10937511 + LTR16A LTR ERVL 261 446 -4 540 325 118 46 chr2 239750416 239750838 -10937016 - L2 LINE L2 -2 3311 2812 1818 136 47 20 chr2 239750838 239751139 -10936715 + AluSx SINE Alu 1 309 -3 540 325 118 46 chr2 239751139 239751242 -10936612 - L2 LINE L2 -501 2812 2718 2333 83 10 0 chr2 239751245 239751547 -10936307 - AluSp SINE Alu -7 306 2 813 131 22 51 chr2 239751717 239751854 -10936000 - FLAM_A SINE Alu 0 133 1 207 0 0 0 chr2 239752017 239752040 -10935814 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1808 127 0 8 chr2 239752049 239752316 -10935538 - AluSq SINE Alu -48 265 1 633 196 171 0 chr2 239752330 239752488 -10935366 + MER5A DNA MER1_type 4 188 -1 2206 86 3 0 chr2 239752758 239753050 -10934804 + AluSx SINE Alu 9 301 -11 674 269 76 31 chr2 239753098 239753321 -10934533 + MIR SINE MIR 29 261 -1 320 268 89 57 chr2 239753959 239754082 -10933772 - MIR SINE MIR -29 233 107 356 295 114 27 chr2 239754861 239755010 -10932844 - MIR SINE MIR -58 204 43 199 229 42 0 chr2 239755487 239755535 -10932319 - MIR3 SINE MIR -11 197 148 21 71 0 0 chr2 239756736 239756778 -10931076 + GC_rich Low_complexity Low_complexity 1 42 0 2287 75 0 3 chr2 239757667 239757961 -10929893 + AluSg SINE Alu 1 293 -17 2195 74 35 32 chr2 239757964 239758276 -10929578 + AluSp SINE Alu 1 313 0 1742 154 11 4 chr2 239758958 239759238 -10928616 - AluJb SINE Alu -14 298 17 843 231 118 0 chr2 239759425 239759654 -10928200 - MIR SINE MIR 0 262 7 861 206 101 17 chr2 239760137 239760538 -10927316 + MLT1E LTR MaLR 2 524 -69 2324 84 10 0 chr2 239760538 239760846 -10927008 + AluSx SINE Alu 1 311 -1 2186 94 0 23 chr2 239760868 239761175 -10926679 + AluSg SINE Alu 1 300 -10 2445 74 0 0 chr2 239761175 239761486 -10926368 + AluY SINE Alu 1 311 0 658 234 0 0 chr2 239761531 239761659 -10926195 - FLAM_A SINE Alu -1 132 5 296 232 0 14 chr2 239761663 239761732 -10926122 + MLT1E LTR MaLR 526 593 0 835 150 0 8 chr2 239761902 239762035 -10925819 + FLAM_C SINE Alu 12 143 0 268 330 59 8 chr2 239762364 239762482 -10925372 - L2 LINE L2 -2 3270 3147 1999 80 83 14 chr2 239763967 239764256 -10923598 - AluSg SINE Alu -1 309 1 690 204 23 0 chr2 239764276 239764408 -10923446 - AluJo SINE Alu -177 135 1 1694 126 48 0 chr2 239764726 239764995 -10922859 + AluSx SINE Alu 28 309 -3 1523 190 0 21 chr2 239765040 239765330 -10922524 + AluJb SINE Alu 13 296 -16 1784 147 14 3 chr2 239765330 239765622 -10922232 + AluSx SINE Alu 1 295 -17 525 84 14 0 chr2 239765622 239765693 -10922161 - AluJ/FLAM SINE Alu -235 77 6 2209 106 0 0 chr2 239765752 239766044 -10921810 - AluSc SINE Alu -17 292 1 2343 76 0 0 chr2 239766054 239766355 -10921499 - AluSx SINE Alu -11 301 1 2161 108 0 3 chr2 239766586 239766883 -10920971 + AluSx SINE Alu 1 296 -16 2026 111 34 3 chr2 239766891 239767189 -10920665 - AluSg SINE Alu -2 308 2 2201 104 0 0 chr2 239767866 239768164 -10919690 + AluSg SINE Alu 1 298 -12 2232 70 0 11 chr2 239768686 239769019 -10918835 - AluSq SINE Alu 0 332 3 1766 156 19 10 chr2 239769026 239769334 -10918520 - AluJb SINE Alu -1 311 1 1188 131 0 0 chr2 239769373 239769541 -10918313 + AluJb SINE Alu 130 297 -15 1441 168 34 31 chr2 239770161 239770452 -10917402 - AluJb SINE Alu -20 292 1 247 156 0 10 chr2 239770479 239770550 -10917304 + Alu SINE Alu 2 148 -18 24 32 0 0 chr2 239770562 239770593 -10917261 + AT_rich Low_complexity Low_complexity 1 31 0 2272 58 41 0 chr2 239770620 239770914 -10916940 + AluY SINE Alu 1 306 -5 1968 113 0 33 chr2 239770915 239771215 -10916639 + AluSx SINE Alu 9 298 -14 739 170 7 37 chr2 239771253 239771388 -10916466 + FLAM_A SINE Alu 1 131 -2 2375 51 0 45 chr2 239771441 239771753 -10916101 - AluY SINE Alu -13 298 1 1576 149 3 48 chr2 239771755 239771840 -10916014 - AluJb SINE Alu -30 282 195 2192 102 0 7 chr2 239771840 239772145 -10915709 + AluY SINE Alu 1 303 -8 1576 149 3 48 chr2 239772145 239772354 -10915500 - AluJb SINE Alu -117 195 1 256 304 25 37 chr2 239772472 239772633 -10915221 + L1MC/D LINE L1 5678 5836 -1972 2013 148 0 0 chr2 239772637 239772947 -10914907 + AluSg SINE Alu 1 310 0 1099 113 0 6 chr2 239772951 239773111 -10914743 + AluJb SINE Alu 1 159 -153 724 116 0 45 chr2 239773111 239773223 -10914631 - FLAM_A SINE Alu -14 128 22 910 105 6 68 chr2 239773226 239773388 -10914466 + AluSg/x SINE Alu 161 312 0 2112 95 3 13 chr2 239773653 239773959 -10913895 + AluSx SINE Alu 1 303 -9 2289 191 61 35 chr2 239774039 239774419 -10913435 + MLT1D LTR MaLR 1 398 -107 1752 138 0 4 chr2 239774419 239774687 -10913167 - AluJb SINE Alu -45 267 1 2289 191 61 35 chr2 239774687 239774798 -10913056 + MLT1D LTR MaLR 398 505 0 215 348 0 9 chr2 239775567 239775682 -10912172 + (TG)n Simple_repeat Simple_repeat 2 115 0 355 219 8 8 chr2 239775718 239775841 -10912013 + (TG)n Simple_repeat Simple_repeat 1 123 0 1301 120 106 80 chr2 239776023 239776297 -10911557 + AluJb SINE Alu 6 286 -26 443 117 0 13 chr2 239776309 239776386 -10911468 + (GAAA)n Simple_repeat Simple_repeat 4 79 0 314 252 202 13 chr2 239776869 239777030 -10910824 + L1M4 LINE L1 1127 3199 -1205 404 36 0 18 chr2 239777031 239777086 -10910768 + (GGGGA)n Simple_repeat Simple_repeat 2 55 0 276 292 65 12 chr2 239777957 239778154 -10909700 - L1ME LINE L1 -393 5728 5514 273 273 39 39 chr2 239778170 239778324 -10909530 - L1ME LINE L1 -2340 5468 5315 2238 106 0 0 chr2 239778337 239778640 -10909214 - AluSq SINE Alu -10 303 1 2439 69 3 0 chr2 239778649 239778954 -10908900 - AluSq SINE Alu -7 306 1 479 83 0 0 chr2 239778981 239779041 -10908813 + Alu SINE Alu 2 61 -257 2106 101 3 19 chr2 239779056 239779363 -10908491 + AluSg SINE Alu 2 303 -7 1843 120 47 0 chr2 239779366 239779640 -10908214 + AluJb SINE Alu 1 287 -25 1946 140 3 7 chr2 239779660 239779967 -10907887 + AluJo SINE Alu 1 306 -6 209 269 0 19 chr2 239780239 239780291 -10907563 + GA-rich Low_complexity Low_complexity 4 54 0 226 274 0 0 chr2 239780439 239780490 -10907364 + MER34 LTR ERV1 1 51 -491 566 208 24 113 chr2 239780503 239780766 -10907088 + MER39 LTR ERV1 167 533 -174 1995 125 3 0 chr2 239780777 239781074 -10906780 + AluSg SINE Alu 1 298 -12 1550 179 21 14 chr2 239781085 239781364 -10906490 + AluJb SINE Alu 1 281 -31 318 159 0 0 chr2 239781368 239781437 -10906417 + (CA)n Simple_repeat Simple_repeat 2 70 0 1803 155 7 7 chr2 239781539 239781849 -10906005 - AluSx SINE Alu -2 310 1 463 121 24 12 chr2 239781849 239781932 -10905922 - LTR56 LTR ERV1 -361 84 1 292 206 55 14 chr2 239781932 239781999 -10905855 + MER34 LTR ERV1 375 444 -98 1326 84 5 35 chr2 239782017 239782079 -10905775 - AluSq SINE Alu -117 196 134 2284 84 3 0 chr2 239782079 239782377 -10905477 - AluSp SINE Alu -14 299 1 1326 84 5 35 chr2 239782377 239782516 -10905338 - AluSq SINE Alu -179 134 1 2267 110 0 0 chr2 239782617 239782927 -10904927 + AluSq SINE Alu 3 312 -1 234 0 0 0 chr2 239783591 239783617 -10904237 + (TG)n Simple_repeat Simple_repeat 1 26 0 2190 104 0 3 chr2 239783789 239784088 -10903766 - AluSx SINE Alu -14 298 1 987 148 0 60 chr2 239784098 239784281 -10903573 - AluSp SINE Alu -13 300 129 2425 30 40 7 chr2 239784284 239784584 -10903270 - AluY SINE Alu 0 311 2 1436 141 100 7 chr2 239784745 239785014 -10902840 - AluJo SINE Alu -18 294 1 23 54 0 0 chr2 239785022 239785059 -10902795 + AT_rich Low_complexity Low_complexity 1 37 0 253 154 0 0 chr2 239785983 239786022 -10901832 + LTR23 LTR ERV1 321 359 -78 1132 159 5 5 chr2 239786056 239786245 -10901609 + AluJo SINE Alu 23 211 -101 520 91 0 0 chr2 239786288 239786354 -10901500 + AluJo SINE Alu 219 284 -28 1950 132 0 10 chr2 239786438 239786749 -10901105 + AluJb SINE Alu 2 309 -3 382 295 191 16 chr2 239786776 239787027 -10900827 + L2 LINE L2 3001 3295 -18 373 310 240 5 chr2 239786994 239787194 -10900660 - MIR SINE MIR -3 259 13 * 646 175 0 0 chr2 239787412 239787515 -10900339 + Tigger5 DNA MER2_type 27 129 -2194 358 139 25 13 chr2 239787597 239787649 -10900205 + CT-rich Low_complexity Low_complexity 1 56 -24 2019 125 0 22 chr2 239787649 239787968 -10899886 - AluSx SINE Alu 0 312 1 358 139 25 13 chr2 239787968 239787994 -10899860 + CT-rich Low_complexity Low_complexity 56 80 0 694 133 133 0 chr2 239787995 239788108 -10899746 - FLAM_C SINE Alu -14 129 2 992 124 0 104 chr2 239788109 239788231 -10899623 + Tigger5 DNA MER2_type 2143 2276 -47 2189 115 0 3 chr2 239788231 239788535 -10899319 - AluSx SINE Alu -9 303 1 992 124 0 104 chr2 239788535 239788549 -10899305 + Tigger5 DNA MER2_type 2276 2290 -33 1461 186 76 13 chr2 239788549 239788850 -10899004 - 7SLRNA srpRNA srpRNA 0 320 1 992 124 0 104 chr2 239788850 239788914 -10898940 + Tigger5 DNA MER2_type 2290 2323 0 738 111 0 9 chr2 239788932 239789069 -10898785 - AluJb SINE Alu 0 310 175 686 128 0 80 chr2 239789255 239789380 -10898474 - FRAM SINE Alu -11 165 51 282 294 76 8 chr2 239789383 239789502 -10898352 + LTR48 LTR ERV1 522 648 -139 1907 141 3 13 chr2 239789539 239789843 -10898011 - AluSx SINE Alu -11 301 1 2423 48 0 0 chr2 239790307 239790600 -10897254 - AluY SINE Alu -18 293 1 2215 91 0 3 chr2 239790739 239791035 -10896819 + AluSg SINE Alu 1 295 -15 245 211 105 0 chr2 239791481 239791557 -10896297 - Charlie4 DNA MER1_type 0 1961 1878 2087 98 0 77 chr2 239791560 239791762 -10896092 - AluSp SINE Alu -2 311 144 2232 100 0 0 chr2 239791762 239792071 -10895783 - AluY SINE Alu -2 309 1 2087 98 0 77 chr2 239792071 239792204 -10895650 - AluSp SINE Alu -169 144 2 1862 140 0 11 chr2 239792205 239792490 -10895364 - AluSx SINE Alu -15 297 16 2210 115 0 3 chr2 239792507 239792821 -10895033 - AluSp SINE Alu 0 313 1 719 209 17 138 chr2 239792825 239792884 -10894970 - Charlie4 DNA MER1_type -186 1775 1710 1717 158 10 20 chr2 239792884 239793181 -10894673 - AluJo SINE Alu -17 295 2 719 209 17 138 chr2 239793181 239793263 -10894591 - Charlie4 DNA MER1_type -251 1710 1620 2241 96 0 0 chr2 239793263 239793566 -10894288 + AluSc SINE Alu 1 303 -6 2225 94 0 31 chr2 239793566 239793701 -10894153 + AluY SINE Alu 1 139 -172 2174 86 0 4 chr2 239793701 239794033 -10893821 + AluSg SINE Alu 1 331 0 2225 94 0 31 chr2 239794033 239794215 -10893639 + AluY SINE Alu 139 309 -2 719 209 17 138 chr2 239794215 239794235 -10893619 - Charlie4 DNA MER1_type -340 1621 1600 2129 83 6 80 chr2 239794235 239794573 -10893281 - AluSq SINE Alu 0 313 1 719 209 17 138 chr2 239794573 239794734 -10893120 - Charlie4 DNA MER1_type -361 1600 35 2208 77 3 17 chr2 239794857 239795157 -10892697 + AluSq SINE Alu 1 296 -17 2172 115 0 0 chr2 239795693 239795989 -10891865 - AluSx SINE Alu -12 300 5 2151 106 7 0 chr2 239796030 239796332 -10891522 + AluSg SINE Alu 1 304 -6 399 252 13 133 chr2 239796457 239796560 -10891294 + L1MC4 LINE L1 7634 7748 -294 2185 100 10 3 chr2 239796560 239796859 -10890995 + AluSx SINE Alu 1 301 -11 399 252 13 133 chr2 239796859 239796919 -10890935 + L1MC4 LINE L1 7748 7763 -279 1986 104 0 73 chr2 239796919 239797236 -10890618 - AluSq SINE Alu -19 294 1 399 252 13 133 chr2 239797236 239797305 -10890549 + L1MC4 LINE L1 7763 7839 -203 2204 94 24 0 chr2 239797307 239797605 -10890249 + AluSg SINE Alu 1 305 -5 2212 86 3 3 chr2 239797618 239797920 -10889934 + AluSx SINE Alu 2 303 -9 667 220 71 55 chr2 239798917 239798994 -10888860 + MIR SINE MIR 16 90 -172 2184 92 7 3 chr2 239798994 239799300 -10888554 - AluSg SINE Alu -2 308 2 667 220 71 55 chr2 239799300 239799404 -10888450 + MIR SINE MIR 90 200 -62 2020 110 10 13 chr2 239799473 239799608 -10888246 + AluSx SINE Alu 1 135 -177 2377 81 3 0 chr2 239799608 239799916 -10887938 + AluSg SINE Alu 1 309 -1 2020 110 10 13 chr2 239799916 239800081 -10887773 + AluSx SINE Alu 135 300 -12 1353 171 94 31 chr2 239800138 239800424 -10887430 + AluJo SINE Alu 1 304 -8 2215 93 13 0 chr2 239800763 239801065 -10886789 + AluSx SINE Alu 1 306 -6 1336 113 140 0 chr2 239801139 239801360 -10886494 + AluJb SINE Alu 2 253 -59 2024 99 3 3 chr2 239801365 239801648 -10886206 + AluY SINE Alu 28 310 -1 209 211 228 0 chr2 239801648 239801705 -10886149 - MIR SINE MIR -159 103 34 1750 142 51 9 chr2 239801799 239802131 -10885723 + L1MB7 LINE L1 5777 6122 -62 2124 87 33 3 chr2 239802131 239802430 -10885424 - AluSx SINE Alu -4 308 1 1644 131 90 4 chr2 239802548 239802816 -10885038 - AluSx SINE Alu -9 303 13 2021 101 3 26 chr2 239802840 239803146 -10884708 - AluSx SINE Alu -13 299 1 1979 94 11 7 chr2 239804004 239804291 -10883563 + AluSc SINE Alu 1 288 -21 813 134 22 101 chr2 239806487 239806666 -10881188 - AluSg/x SINE Alu -11 299 135 1988 153 0 3 chr2 239806863 239807170 -10880684 - AluSx SINE Alu -6 306 1 357 177 0 0 chr2 239807233 239807295 -10880559 - AluSx SINE Alu -9 292 231 1034 123 31 6 chr2 239807295 239807458 -10880396 - AluSx SINE Alu -145 167 1 189 340 132 0 chr2 239807501 239807607 -10880247 - L2 LINE L2 -1 3271 3152 1838 160 17 0 chr2 239809771 239810065 -10877789 + AluJo SINE Alu 14 312 0 1144 147 0 25 chr2 239810335 239810532 -10877322 - AluSx SINE Alu 0 312 121 1093 84 0 52 chr2 239810548 239810567 -10877287 - AluSx SINE Alu -167 146 128 2325 87 3 10 chr2 239810567 239810879 -10876975 - AluSp SINE Alu -2 311 2 1093 84 0 52 chr2 239810879 239811013 -10876841 - AluSx SINE Alu -185 128 1 450 363 66 55 chr2 239811671 239811806 -10876048 - L3 LINE CR1 0 1577 1445 1738 168 7 26 chr2 239811806 239812115 -10875739 - AluJb SINE Alu -8 304 2 450 363 66 55 chr2 239812115 239812618 -10875236 - L3 LINE CR1 -132 1445 932 2453 70 0 0 chr2 239813183 239813483 -10874371 - AluSq SINE Alu -13 300 1 208 219 0 0 chr2 239813693 239813734 -10874120 + (GGGTG)n Simple_repeat Simple_repeat 4 44 0 1032 104 0 7 chr2 239814943 239815087 -10872767 - AluSq/x SINE Alu -169 143 1 2033 104 7 32 chr2 239816368 239816676 -10871178 - AluSq SINE Alu -13 300 1 732 296 52 8 chr2 239817945 239818166 -10869688 - MIR SINE MIR 0 262 27 2371 69 0 7 chr2 239818166 239818472 -10869382 - AluY SINE Alu -7 304 1 732 296 52 8 chr2 239818472 239818500 -10869354 - MIR SINE MIR -235 27 2 244 136 15 15 chr2 239819070 239819136 -10868718 + (CA)n Simple_repeat Simple_repeat 1 66 0 2128 117 0 13 chr2 239819323 239819661 -10868193 - AluSx SINE Alu 0 334 1 234 0 0 0 chr2 239819685 239819711 -10868143 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2321 67 3 14 chr2 239819718 239820015 -10867839 - AluY SINE Alu -17 294 1 1330 153 12 116 chr2 239820019 239820346 -10867508 - AluJo SINE Alu -19 293 1 225 200 40 0 chr2 239820457 239820507 -10867347 - L2 LINE L2 0 3272 3221 2236 89 3 0 chr2 239820702 239821017 -10866837 - AluSp SINE Alu 0 316 1 2199 88 14 0 chr2 239821026 239821320 -10866534 - AluSg SINE Alu -12 298 1 245 305 0 63 chr2 239821428 239821523 -10866331 + MIR SINE MIR 135 223 -39 266 200 0 0 chr2 239821527 239821572 -10866282 - MIR SINE MIR -105 157 113 2238 89 0 3 chr2 239822092 239822396 -10865458 - AluY SINE Alu -8 303 1 1102 60 0 0 chr2 239822396 239822530 -10865324 - AluY SINE Alu -177 134 1 293 346 63 8 chr2 239822532 239822659 -10865195 - MIR SINE MIR -50 212 79 24 85 0 0 chr2 239823621 239823680 -10864174 + GC_rich Low_complexity Low_complexity 1 59 0 202 228 16 173 chr2 239824464 239824564 -10863290 + MIR SINE MIR 112 190 -72 2200 93 3 0 chr2 239824564 239824865 -10862989 + AluSc SINE Alu 1 302 -7 202 228 16 173 chr2 239824865 239824891 -10862963 + MIR SINE MIR 190 218 -44 303 333 58 14 chr2 239825697 239825835 -10862019 + MIR SINE MIR 8 151 -111 1009 170 0 6 chr2 239826636 239826801 -10861053 + FRAM SINE Alu 8 171 -5 255 173 0 0 chr2 239827573 239827625 -10860229 + G-rich Low_complexity Low_complexity 6 57 0 220 346 7 15 chr2 239829624 239829760 -10858094 + (CATA)n Simple_repeat Simple_repeat 3 137 0 * 341 275 0 53 chr2 239829672 239829861 -10857993 + (CA)n Simple_repeat Simple_repeat 2 180 0 499 283 29 8 chr2 239830613 239830796 -10857058 + MIR SINE MIR 54 239 -23 220 350 50 0 chr2 239832189 239832269 -10855585 + MIR SINE MIR 10 93 -169 2263 111 0 0 chr2 239832606 239832912 -10854942 + AluSx SINE Alu 1 306 -6 2216 98 0 35 chr2 239833228 239833546 -10854308 - AluSg SINE Alu -3 307 1 1913 129 18 3 chr2 239833546 239833832 -10854022 - AluSp SINE Alu -23 290 1 221 191 18 21 chr2 239833886 239833948 -10853906 - MIR SINE MIR -74 134 90 1274 175 11 79 chr2 239834095 239834220 -10853634 - AluJo SINE Alu -51 261 129 2085 137 0 3 chr2 239834220 239834520 -10853334 - AluSg SINE Alu -11 299 1 2032 103 7 4 chr2 239834527 239834835 -10853019 - AluSx SINE Alu 0 309 1 2218 94 7 3 chr2 239834843 239835141 -10852713 - AluSx SINE Alu -13 299 1 1274 175 11 79 chr2 239835141 239835277 -10852577 - AluJo SINE Alu -196 116 1 216 0 0 0 chr2 239835282 239835306 -10852548 + (T)n Simple_repeat Simple_repeat 1 24 0 215 304 165 0 chr2 239837112 239837191 -10850663 + MIR SINE MIR 117 208 -54 2184 105 20 0 chr2 239837286 239837581 -10850273 + AluSx SINE Alu 2 302 -10 1917 119 3 48 chr2 239837849 239838160 -10849694 - AluSq SINE Alu -16 297 1 1814 146 7 23 chr2 239838163 239838472 -10849382 - AluJb SINE Alu -2 310 7 802 147 0 23 chr2 239839048 239839177 -10848677 + FLAM_C SINE Alu 1 126 -17 342 184 55 14 chr2 239839332 239839416 -10848438 + MIR SINE MIR 23 109 -99 1589 109 84 4 chr2 239839784 239840022 -10847832 - AluSg1 SINE Alu -50 259 3 523 76 0 0 chr2 239840045 239840111 -10847743 - AluS SINE Alu -247 66 1 2341 89 3 6 chr2 239840299 239840612 -10847242 - AluSq SINE Alu -1 312 1 1631 158 13 55 chr2 239840666 239840842 -10847012 - AluJo SINE Alu -14 298 139 2203 87 7 0 chr2 239840842 239841130 -10846724 + AluSx SINE Alu 1 290 -22 1631 158 13 55 chr2 239841130 239841264 -10846590 - AluJo SINE Alu -173 139 1 2200 87 0 3 chr2 239841274 239841605 -10846249 - AluSx SINE Alu 0 330 1 2281 89 0 0 chr2 239841893 239842184 -10845670 - AluSx SINE Alu -19 293 3 1909 144 6 10 chr2 239842914 239843226 -10844628 + AluJb SINE Alu 1 311 -1 505 208 66 9 chr2 239843266 239843372 -10844482 - MER81 DNA DNA 0 114 3 495 173 0 0 chr2 239843539 239843620 -10844234 + AluJ/FRAM SINE Alu 216 296 -16 2053 110 3 23 chr2 239843621 239843922 -10843932 + AluSp SINE Alu 1 295 -18 542 281 5 45 chr2 239845061 239845151 -10842703 - MIR SINE MIR -31 231 139 2190 120 0 0 chr2 239845151 239845460 -10842394 - AluSg SINE Alu -1 309 1 542 281 5 45 chr2 239845460 239845471 -10842383 - MIR SINE MIR -123 139 129 2318 89 3 6 chr2 239845471 239845785 -10842069 - AluSq SINE Alu 0 313 1 2141 103 10 13 chr2 239845787 239846098 -10841756 - AluSg SINE Alu 0 310 1 1772 183 0 0 chr2 239846100 239846395 -10841459 - AluJb SINE Alu -17 295 1 542 281 5 45 chr2 239846395 239846485 -10841369 - MIR SINE MIR -135 127 41 243 254 15 0 chr2 239846578 239846645 -10841209 - Charlie8 DNA MER1_type -994 1423 1356 793 178 0 0 chr2 239846716 239846845 -10841009 + FLAM_A SINE Alu 1 129 -4 2174 91 7 14 chr2 239847085 239847382 -10840472 + AluSq SINE Alu 1 295 -18 1843 107 20 99 chr2 239847382 239847726 -10840128 + AluYb8 SINE Alu 1 318 0 2290 63 3 53 chr2 239848265 239848583 -10839271 - AluSg SINE Alu -8 302 1 216 100 0 25 chr2 239851179 239851219 -10836635 + (CCG)n Simple_repeat Simple_repeat 3 41 0 22 70 0 0 chr2 239851359 239851402 -10836452 + GC_rich Low_complexity Low_complexity 1 43 0 22 80 0 0 chr2 239851756 239851806 -10836048 + GC_rich Low_complexity Low_complexity 1 50 0 189 107 0 0 chr2 239854094 239854122 -10833732 + (TATATG)n Simple_repeat Simple_repeat 3 30 0 480 100 0 0 chr2 239854122 239854192 -10833662 + U4 snRNA snRNA 2 71 -74 216 200 0 0 chr2 239854524 239854574 -10833280 + GA-rich Low_complexity Low_complexity 3 52 0 280 211 18 0 chr2 239857657 239857714 -10830140 + MIR SINE MIR 94 151 -111 231 322 11 6 chr2 239858491 239858668 -10829186 + (CACTC)n Simple_repeat Simple_repeat 1 178 0 1091 91 0 0 chr2 239859769 239859923 -10827931 - AluSg/x SINE Alu -18 292 139 678 298 122 45 chr2 239859964 239860383 -10827471 + MLT1K LTR MaLR 136 586 -2 1465 179 14 28 chr2 239860922 239861235 -10826619 + AluJb SINE Alu 1 309 0 356 237 26 44 chr2 239861680 239861794 -10826060 + L1ME LINE L1 5548 5659 -462 2293 76 13 0 chr2 239861794 239862095 -10825759 + AluSx SINE Alu 1 305 -7 823 167 14 0 chr2 239862136 239862330 -10825524 - AluJb SINE Alu 0 332 137 228 314 0 12 chr2 239862334 239862420 -10825434 + L1ME LINE L1 5705 5789 -332 875 229 39 24 chr2 239862904 239863109 -10824745 - MLT1K LTR MaLR -7 581 374 183 288 41 0 chr2 239864514 239864587 -10823267 + MIR SINE MIR 58 133 -75 1594 156 24 136 chr2 239864898 239864966 -10822888 - MLT1A1 LTR MaLR 0 365 291 2148 92 7 0 chr2 239864966 239865276 -10822578 + AluSq SINE Alu 1 312 0 1594 156 24 136 chr2 239865276 239865617 -10822237 - MLT1A1 LTR MaLR -74 291 1 776 143 8 15 chr2 239865714 239865847 -10822007 + AluJo SINE Alu 5 136 -176 2141 98 0 10 chr2 239866137 239866434 -10821420 - AluSg SINE Alu -16 294 1 21 0 0 0 chr2 239866868 239866889 -10820965 + AT_rich Low_complexity Low_complexity 1 21 0 1866 135 10 0 chr2 239867146 239867435 -10820419 - AluJb SINE Alu -20 292 1 1517 167 10 35 chr2 239867465 239867753 -10820101 - AluJo SINE Alu -18 294 14 1959 219 75 11 chr2 239867802 239867980 -10819874 - MER119 DNA MER1_type 0 583 418 1895 103 41 10 chr2 239867980 239868270 -10819584 - AluSx SINE Alu -13 299 1 1959 219 75 11 chr2 239868270 239868611 -10819243 - MER119 DNA MER1_type -165 418 31 794 119 8 8 chr2 239869519 239869637 -10818217 - FLAM_C SINE Alu -15 118 1 433 306 82 60 chr2 239869656 239869777 -10818077 + L2 LINE L2 3074 3191 -122 2121 101 7 0 chr2 239869777 239870073 -10817781 + AluSq SINE Alu 1 298 -15 433 306 82 60 chr2 239870073 239870183 -10817671 + L2 LINE L2 3191 3310 -3 213 281 87 61 chr2 239870411 239870642 -10817212 - L2 LINE L2 -1439 1875 1639 2222 94 0 3 chr2 239870712 239871011 -10816843 - AluSg SINE Alu -12 298 1 2018 128 7 0 chr2 239871011 239871315 -10816539 - AluSq SINE Alu -6 307 1 432 195 76 42 chr2 239871871 239871989 -10815865 + MER5A DNA MER1_type 1 122 -67 2332 88 0 0 chr2 239872551 239872846 -10815008 + AluSg SINE Alu 1 295 -15 860 165 19 6 chr2 239872853 239873037 -10814817 + FRAM SINE Alu 1 178 0 893 101 176 0 chr2 239873057 239873205 -10814649 - AluY SINE Alu -3 308 135 1631 150 0 34 chr2 239873210 239873524 -10814330 - AluJb SINE Alu 0 328 25 2068 90 3 31 chr2 239873573 239873887 -10813967 + AluSx SINE Alu 1 306 0 2008 90 52 7 chr2 239874169 239874458 -10813396 + AluSq SINE Alu 2 303 -10 21 71 0 0 chr2 239875050 239875092 -10812762 + AT_rich Low_complexity Low_complexity 1 42 0 379 320 64 19 chr2 239876056 239876212 -10811642 + MLT1K LTR MaLR 15 177 -411 237 241 0 17 chr2 239876327 239876385 -10811469 + LTR67 LTR ERVL 501 557 0 2401 61 0 6 chr2 239876536 239876849 -10811005 + AluY SINE Alu 1 311 0 308 148 0 0 chr2 239876918 239876972 -10810882 + Tigger5 DNA MER2_type 2232 2285 -38 2384 67 0 19 chr2 239877164 239877477 -10810377 + AluY SINE Alu 1 307 -4 2411 61 0 0 chr2 239877568 239877865 -10809989 + AluY SINE Alu 1 297 -14 2060 114 3 0 chr2 239877908 239878205 -10809649 - AluY SINE Alu -13 298 1 654 188 0 0 chr2 239878216 239878317 -10809537 - FLAM_A SINE Alu -41 101 1 2167 95 3 20 chr2 239878350 239878654 -10809200 + AluSx SINE Alu 1 299 -13 789 191 0 0 chr2 239878669 239878800 -10809054 + FLAM_A SINE Alu 3 133 0 1007 189 0 0 chr2 239878931 239879095 -10808759 - AluSg/x SINE Alu -20 292 129 396 288 96 28 chr2 239879411 239879588 -10808266 - MIR SINE MIR -55 207 19 2224 102 0 13 chr2 239881243 239881557 -10806297 + AluSx SINE Alu 1 310 -2 865 239 30 57 chr2 239882090 239882246 -10805608 + HAL1 LINE L1 668 827 -1680 1770 130 0 0 chr2 239882246 239882499 -10805355 - AluSx SINE Alu -17 295 43 865 239 30 57 chr2 239882499 239882677 -10805177 + HAL1 LINE L1 827 993 -1514 22 0 0 0 chr2 239882695 239882717 -10805137 + AT_rich Low_complexity Low_complexity 1 22 0 949 202 146 72 chr2 239882871 239883010 -10804844 + HAL1 LINE L1 1031 1158 -1349 1848 152 7 0 chr2 239883010 239883306 -10804548 + AluJb SINE Alu 1 298 -14 949 202 146 72 chr2 239883306 239883461 -10804393 + HAL1 LINE L1 1158 1300 -1207 1974 68 100 0 chr2 239883461 239883741 -10804113 + AluSp SINE Alu 1 308 -5 949 202 146 72 chr2 239883741 239883946 -10803908 + HAL1 LINE L1 1300 1568 -939 1984 269 69 35 chr2 239883976 239884726 -10803128 + HAL1 LINE L1 1681 2461 -46 2193 90 7 3 chr2 239884726 239885025 -10802829 - AluSp SINE Alu -13 300 1 1984 269 69 35 chr2 239885025 239885073 -10802781 + HAL1 LINE L1 2461 2506 -1 2231 81 3 23 chr2 239885746 239886056 -10801798 + AluSc SINE Alu 1 304 -5 2285 72 7 3 chr2 239887032 239887336 -10800518 - AluSp SINE Alu -8 305 1 25 31 0 0 chr2 239887363 239887395 -10800459 + AT_rich Low_complexity Low_complexity 1 32 0 219 36 0 0 chr2 239887813 239887841 -10800013 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 1000 92 224 51 chr2 239888613 239888728 -10799126 - MER30 DNA MER1_type 0 230 136 2021 120 0 16 chr2 239888728 239889045 -10798809 - AluSx SINE Alu 0 312 1 1000 92 224 51 chr2 239889045 239889125 -10798729 - MER30 DNA MER1_type -94 136 1 214 324 14 27 chr2 239889275 239889423 -10798431 + GA-rich Low_complexity Low_complexity 1 146 0 2378 61 0 3 chr2 239889698 239889994 -10797860 - AluSq SINE Alu -18 295 1 234 239 113 0 chr2 239890040 239890111 -10797743 + MIR SINE MIR 184 262 0 394 237 205 19 chr2 239890148 239890304 -10797550 + L2 LINE L2 2621 2805 -509 1281 84 6 28 chr2 239890491 239890670 -10797184 + THE1A LTR MaLR 181 355 0 11342 86 24 15 chr2 239890670 239892106 -10795748 + THE1A-int LTR MaLR 1 1454 -126 1965 106 9 64 chr2 239892106 239892436 -10795418 - AluSx SINE Alu 0 312 1 11342 86 24 15 chr2 239892436 239892565 -10795289 + THE1A-int LTR MaLR 1454 1580 0 2468 79 44 3 chr2 239892565 239892906 -10794948 + THE1A LTR MaLR 1 355 0 1577 106 33 122 chr2 239893085 239893414 -10794440 - AluSx SINE Alu -12 300 1 2682 143 249 19 chr2 239893735 239893766 -10794088 - L1MC3 LINE L1 0 7785 7762 1497 171 56 17 chr2 239893766 239894053 -10793801 - AluJb SINE Alu -14 298 1 2682 143 249 19 chr2 239894053 239894652 -10793202 - L1MC3 LINE L1 -23 7762 7010 311 303 75 36 chr2 239894840 239895030 -10792824 + MIR SINE MIR 12 215 -47 23 0 0 0 chr2 239895372 239895395 -10792459 + AT_rich Low_complexity Low_complexity 1 23 0 2483 40 7 0 chr2 239895438 239895738 -10792116 - AluY SINE Alu -9 302 1 2045 77 0 83 chr2 239895849 239896237 -10791617 + AluY SINE Alu 1 360 0 21 57 0 0 chr2 239896274 239896309 -10791545 + AT_rich Low_complexity Low_complexity 1 35 0 352 339 62 40 chr2 239896323 239896547 -10791307 + L2 LINE L2 2658 2886 -428 2201 90 0 47 chr2 239896958 239897280 -10790574 - AluSx SINE Alu -5 307 1 1721 203 28 8 chr2 239897519 239897873 -10789981 + MLT1A1 LTR MaLR 5 365 0 921 93 8 8 chr2 239898074 239898203 -10789651 + AluSq/x SINE Alu 21 149 -163 2243 88 3 0 chr2 239898249 239898543 -10789311 + AluSp SINE Alu 1 295 -18 1351 224 0 7 chr2 239899050 239899349 -10788505 - AluJo SINE Alu -15 297 1 1612 147 0 8 chr2 239899572 239899830 -10788024 - AluJb SINE Alu -18 294 39 2054 96 24 0 chr2 239899909 239900200 -10787654 - AluSq SINE Alu -15 298 1 333 220 21 142 chr2 239900303 239900444 -10787410 + L1ME4a LINE L1 5828 5951 -170 551 47 0 0 chr2 239900495 239900559 -10787295 + U6 snRNA snRNA 1 64 -43 214 205 0 0 chr2 239900723 239900762 -10787092 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 216 97 0 0 chr2 239900773 239900804 -10787050 + (TAGA)n Simple_repeat Simple_repeat 1 31 0 1253 162 54 25 chr2 239900804 239901045 -10786809 - AluJo SINE Alu -64 248 1 940 165 41 12 chr2 239901108 239901278 -10786576 + MER5B DNA MER1_type 1 175 -3 698 206 133 0 chr2 239901340 239901495 -10786359 - MER5A DNA MER1_type -6 183 5 1792 155 7 0 chr2 239901644 239901940 -10785914 + AluJo SINE Alu 1 298 -14 364 307 82 78 chr2 239902929 239903186 -10784668 - MIR SINE MIR -1 261 4 2275 67 0 10 chr2 239903785 239904085 -10783769 - AluY SINE Alu -14 297 1 239 350 50 0 chr2 239904415 239904515 -10783339 - MIR SINE MIR -138 124 20 2224 102 0 0 chr2 239904949 239905252 -10782602 - AluSx SINE Alu -9 303 1 903 107 0 14 chr2 239905429 239905569 -10782285 + FLAM_C SINE Alu 6 143 0 379 259 259 6 chr2 239906071 239906233 -10781621 + MER5C DNA MER1_type 3 205 -119 1663 147 18 28 chr2 239906236 239906521 -10781333 - AluJo SINE Alu -5 307 26 189 107 0 0 chr2 240107894 240107922 -10579932 + (TATATG)n Simple_repeat Simple_repeat 3 30 0 510 100 0 0 chr2 240107922 240107992 -10579862 + U4 snRNA snRNA 2 71 -74 231 133 22 22 chr2 240108003 240108048 -10579806 - MER57A LTR ERV1 -68 335 291 216 200 0 0 chr2 240108324 240108374 -10579480 + GA-rich Low_complexity Low_complexity 3 52 0 2026 92 6 71 chr2 240109367 240109575 -10578279 + THE1A-int LTR MaLR 1265 1444 -136 1984 106 9 64 chr2 240109575 240109905 -10577949 - AluSx SINE Alu 0 312 1 2026 92 6 71 chr2 240109905 240110034 -10577820 + THE1A-int LTR MaLR 1444 1580 0 2492 79 44 3 chr2 240110034 240110375 -10577479 + THE1A LTR MaLR 1 355 0 1627 107 34 110 chr2 240110553 240110879 -10576975 - AluSx SINE Alu -11 301 1 587 141 66 19 chr2 240111199 240111230 -10576624 - L1MC3 LINE L1 0 7785 7757 1525 171 56 17 chr2 240111230 240111517 -10576337 - AluJb SINE Alu -14 298 1 587 141 66 19 chr2 240111517 240112116 -10575738 - L1MC3 LINE L1 -28 7757 7010 244 136 15 15 chr2 240112386 240112452 -10575402 + (TG)n Simple_repeat Simple_repeat 1 66 0 710 263 50 33 chr2 240113032 240113050 -10574804 + MIR SINE MIR 19 35 -227 2348 69 0 7 chr2 240113050 240113356 -10574498 + AluY SINE Alu 1 304 -7 710 263 50 33 chr2 240113356 240113577 -10574277 + MIR SINE MIR 35 262 0 2002 104 7 32 chr2 240114845 240115153 -10572701 + AluSq SINE Alu 1 300 -13 1021 104 0 7 chr2 240116430 240116574 -10571280 + AluSq/x SINE Alu 1 143 -170 2132 64 0 0 chr2 240116919 240117183 -10570671 - AluY SINE Alu -47 264 1 807 114 0 0 chr2 240117361 240117475 -10570379 + FLAM_C SINE Alu 6 119 -24 195 42 0 0 chr2 240117477 240117501 -10570353 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 196 302 0 0 chr2 240118002 240118045 -10569809 + MER5C DNA MER1_type 3 45 -279 1749 157 17 27 chr2 240118180 240118480 -10569374 - AluJo SINE Alu -15 297 1 353 246 100 9 chr2 240118482 240118592 -10569262 + MER5C DNA MER1_type 205 324 0 423 165 12 6 chr2 240118679 240118931 -10568923 + AluJo SINE Alu 2 297 -15 1663 171 6 44 chr2 240119520 240119836 -10568018 + AluJo SINE Alu 1 304 -8 2031 117 13 16 chr2 240121252 240121560 -10566294 + AluSx SINE Alu 1 307 -5 189 284 17 95 chr2 240121804 240121864 -10565990 - MIR SINE MIR -56 206 158 2114 96 17 0 chr2 240121864 240122155 -10565699 - AluY SINE Alu -15 296 1 189 284 17 95 chr2 240122155 240122210 -10565644 - MIR SINE MIR -104 158 100 186 43 0 0 chr2 240122429 240122452 -10565402 + (TTA)n Simple_repeat Simple_repeat 1 23 0 901 224 3 61 chr2 240122455 240122749 -10565105 - AluSx SINE Alu -35 277 1 410 265 238 11 chr2 240122795 240122984 -10564870 - MIR SINE MIR -26 236 5 2020 120 3 10 chr2 240123105 240123406 -10564448 - AluSx SINE Alu -12 300 2 2029 132 0 22 chr2 240123411 240123730 -10564124 - AluSx SINE Alu 0 312 1 332 288 74 8 chr2 240123778 240123844 -10564010 - L1MC/D LINE L1 -747 5399 5339 1576 157 3 55 chr2 240123844 240124137 -10563717 - AluJb SINE Alu -32 280 3 332 288 74 8 chr2 240124137 240124311 -10563543 - L1MC/D LINE L1 -807 5339 5236 2162 83 59 0 chr2 240124573 240124862 -10562992 + AluSq SINE Alu 2 307 -6 296 308 65 0 chr2 240125147 240125254 -10562600 + L2 LINE L2 3199 3312 -1 238 118 0 78 chr2 240125460 240125511 -10562343 - MIR SINE MIR -213 49 3 898 123 0 8 chr2 240125856 240125986 -10561868 - FLAM_C SINE Alu -4 129 1 631 259 130 30 chr2 240126116 240126502 -10561352 + L1ME LINE L1 4735 5205 -941 2193 113 0 0 chr2 240126502 240126803 -10561051 + AluSg SINE Alu 1 301 -9 631 259 130 30 chr2 240126803 240127023 -10560831 + L1ME LINE L1 5205 5402 -744 960 213 57 17 chr2 240127058 240127288 -10560566 - MIR SINE MIR -21 241 3 257 250 204 0 chr2 240127311 240127443 -10560411 + L1ME LINE L1 5409 5567 -554 183 42 0 0 chr2 240129047 240129071 -10558783 + (CGGTG)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr2 240129492 240129513 -10558341 + GC_rich Low_complexity Low_complexity 1 21 0 570 282 81 0 chr2 240130541 240130715 -10557139 - MIR3 SINE MIR 0 208 21 199 167 48 0 chr2 240131064 240131106 -10556748 - L2 LINE L2 -8 3305 3262 2467 215 105 31 chr2 240131373 240132240 -10555614 - L1ME3 LINE L1 -64 6098 5164 900 194 0 35 chr2 240132240 240132410 -10555444 - FAM SINE Alu -11 164 1 2467 215 105 31 chr2 240132410 240132503 -10555351 - L1ME3 LINE L1 -998 5164 5079 1638 169 17 17 chr2 240132706 240133008 -10554846 + AluJo SINE Alu 3 304 -8 251 353 95 49 chr2 240133090 240133314 -10554540 + L2 LINE L2 2352 2603 -711 2105 113 7 0 chr2 240133314 240133614 -10554240 - AluSx SINE Alu -9 303 2 251 353 95 49 chr2 240133614 240133777 -10554077 + L2 LINE L2 2603 2757 -557 272 211 18 0 chr2 240136855 240136912 -10550942 + MIR SINE MIR 94 151 -111 242 322 11 6 chr2 240137694 240137871 -10549983 + (CACTC)n Simple_repeat Simple_repeat 1 178 0 1107 91 0 0 chr2 240138971 240139125 -10548729 - AluSg/x SINE Alu -18 294 141 719 297 127 46 chr2 240139166 240139583 -10548271 + MLT1K LTR MaLR 136 586 -2 1489 179 14 28 chr2 240140120 240140433 -10547421 + AluJb SINE Alu 1 309 0 349 237 26 44 chr2 240140878 240140992 -10546862 + L1ME LINE L1 5548 5659 -462 2268 83 13 0 chr2 240140992 240141294 -10546560 + AluSx SINE Alu 1 306 -6 2185 88 3 0 chr2 240141492 240141777 -10546077 - AluSx SINE Alu -26 286 1 2256 89 0 0 chr2 240142065 240142356 -10545498 - AluSx SINE Alu -19 293 3 1878 144 6 10 chr2 240143086 240143398 -10544456 + AluJb SINE Alu 1 311 -1 498 208 66 9 chr2 240143438 240143544 -10544310 - MER81 DNA DNA 0 114 3 496 173 0 0 chr2 240143711 240143792 -10544062 + AluJ/FRAM SINE Alu 216 296 -16 2030 109 3 23 chr2 240143793 240144095 -10543759 + AluSp SINE Alu 1 296 -17 540 281 5 45 chr2 240145233 240145323 -10542531 - MIR SINE MIR -31 231 139 2169 120 0 0 chr2 240145323 240145632 -10542222 - AluSg SINE Alu -1 309 1 540 281 5 45 chr2 240145632 240145643 -10542211 - MIR SINE MIR -123 139 129 2296 89 3 6 chr2 240145643 240145957 -10541897 - AluSq SINE Alu 0 313 1 2118 103 10 13 chr2 240145959 240146270 -10541584 - AluSg SINE Alu 0 310 1 1729 183 0 0 chr2 240146272 240146567 -10541287 - AluJb SINE Alu -17 295 1 540 281 5 45 chr2 240146567 240146657 -10541197 - MIR SINE MIR -135 127 41 266 254 15 0 chr2 240146750 240146817 -10541037 - Charlie8 DNA MER1_type -994 1423 1356 789 178 0 0 chr2 240146888 240147017 -10540837 + FLAM_A SINE Alu 1 129 -4 181 293 83 38 chr2 240147092 240147225 -10540629 + L3 LINE CR1 1216 1354 -223 2148 91 7 14 chr2 240147257 240147554 -10540300 + AluSq SINE Alu 1 295 -18 1714 122 20 99 chr2 240147554 240147898 -10539956 + AluYb8 SINE Alu 1 318 0 233 288 14 0 chr2 240148165 240148238 -10539616 + MER116 DNA Mariner 3 76 -4 2182 63 9 54 chr2 240148426 240148742 -10539112 - AluSg SINE Alu -8 302 1 210 37 0 0 chr2 240150873 240150900 -10536954 + (TA)n Simple_repeat Simple_repeat 1 27 0 2065 118 0 14 chr2 240150900 240151197 -10536657 - AluSx SINE Alu -19 293 1 234 0 0 0 chr2 240151221 240151247 -10536607 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2299 67 3 14 chr2 240151254 240151551 -10536303 - AluY SINE Alu -17 294 1 1288 153 12 116 chr2 240151555 240151882 -10535972 - AluJo SINE Alu -19 293 1 224 200 40 0 chr2 240151993 240152043 -10535811 - L2 LINE L2 0 3272 3221 2208 89 3 0 chr2 240152238 240152553 -10535301 - AluSp SINE Alu 0 316 1 2179 88 14 0 chr2 240152562 240152856 -10534998 - AluSg SINE Alu -12 298 1 233 305 0 63 chr2 240152964 240153059 -10534795 + MIR SINE MIR 135 223 -39 265 200 0 0 chr2 240153063 240153108 -10534746 - MIR SINE MIR -105 157 113 2171 89 3 3 chr2 240153629 240153932 -10533922 - AluY SINE Alu -8 303 1 1095 60 0 0 chr2 240153932 240154066 -10533788 - AluY SINE Alu -177 134 1 270 346 63 8 chr2 240154068 240154195 -10533659 - MIR SINE MIR -50 212 79 21 0 0 0 chr2 240155158 240155179 -10532675 + GC_rich Low_complexity Low_complexity 1 21 0 187 228 16 173 chr2 240155981 240156081 -10531773 + MIR SINE MIR 112 190 -72 2175 93 3 0 chr2 240156081 240156382 -10531472 + AluSc SINE Alu 1 302 -7 187 228 16 173 chr2 240156382 240156408 -10531446 + MIR SINE MIR 190 218 -44 277 330 0 0 chr2 240157230 240157327 -10530527 + MIR SINE MIR 26 122 -140 1044 170 0 6 chr2 240158149 240158314 -10529540 + FRAM SINE Alu 8 171 -5 255 173 0 0 chr2 240159082 240159134 -10528720 + G-rich Low_complexity Low_complexity 6 57 0 220 346 7 15 chr2 240161129 240161265 -10526589 + (CATA)n Simple_repeat Simple_repeat 3 137 0 * 341 275 0 53 chr2 240161177 240161366 -10526488 + (CA)n Simple_repeat Simple_repeat 2 180 0 444 314 35 6 chr2 240162132 240162301 -10525553 + MIR SINE MIR 66 239 -23 206 352 42 0 chr2 240163695 240163766 -10524088 + MIR SINE MIR 20 93 -169 2363 108 0 3 chr2 240164103 240164410 -10523444 + AluSx SINE Alu 1 306 -6 2204 98 6 38 chr2 240164725 240165042 -10522812 - AluSg SINE Alu -3 307 1 2006 129 18 3 chr2 240165042 240165328 -10522526 - AluSp SINE Alu -23 290 1 212 173 22 22 chr2 240165382 240165444 -10522410 - MIR SINE MIR -78 130 90 1327 175 11 79 chr2 240165590 240165715 -10522139 - AluJo SINE Alu -51 261 129 2184 137 0 3 chr2 240165715 240166015 -10521839 - AluSg SINE Alu -11 299 1 2135 103 7 4 chr2 240166022 240166330 -10521524 - AluSx SINE Alu 0 309 1 2323 94 7 3 chr2 240166338 240166636 -10521218 - AluSx SINE Alu -13 299 1 1327 175 11 79 chr2 240166636 240166772 -10521082 - AluJo SINE Alu -196 116 1 207 0 0 0 chr2 240166777 240166800 -10521054 + (T)n Simple_repeat Simple_repeat 1 23 0 192 304 165 0 chr2 240168601 240168680 -10519174 + MIR SINE MIR 117 208 -54 2319 102 20 0 chr2 240168775 240169070 -10518784 + AluSx SINE Alu 2 302 -10 2008 122 3 48 chr2 240169338 240169649 -10518205 - AluSq SINE Alu -16 297 1 1910 146 7 23 chr2 240169652 240169961 -10517893 - AluJb SINE Alu -2 310 7 835 139 47 8 chr2 240170536 240170665 -10517189 + AluJo SINE Alu 1 134 -178 331 184 55 14 chr2 240170820 240170904 -10516950 + MIR SINE MIR 23 109 -99 1625 110 89 4 chr2 240171272 240171509 -10516345 - AluSg1 SINE Alu -50 259 3 498 77 0 0 chr2 240171532 240171597 -10516257 - AluS SINE Alu -247 66 2 2281 100 13 7 chr2 240171786 240172096 -10515758 - AluSq SINE Alu -1 312 1 312 226 57 19 chr2 240172150 240172256 -10515598 - AluJb SINE Alu -3 299 190 268 339 189 16 chr2 240172958 240173472 -10514382 + L2 LINE L2 1712 2314 -1000 1056 176 16 0 chr2 240173528 240173710 -10514144 - MLT1B LTR MaLR 0 390 206 1148 220 0 38 chr2 240173713 240174026 -10513828 - AluJb SINE Alu -5 307 7 904 127 73 12 chr2 240174066 240174231 -10513623 - MLT1B LTR MaLR -215 175 1 13658 111 81 12 chr2 240174314 240174878 -10512976 - Tigger1 DNA MER2_type 0 2418 1894 2271 122 0 0 chr2 240174878 240175182 -10512672 - AluSq SINE Alu -9 304 1 13658 111 81 12 chr2 240175182 240175629 -10512225 - Tigger1 DNA MER2_type -524 1894 1479 1879 138 20 13 chr2 240175629 240175927 -10511927 + AluSx SINE Alu 1 300 -12 13658 111 81 12 chr2 240175927 240177176 -10510678 - Tigger1 DNA MER2_type -939 1479 1 1735 161 16 35 chr2 240177257 240177431 -10510423 - AluJo SINE Alu -8 304 137 2255 112 3 10 chr2 240177431 240177744 -10510110 - AluSp SINE Alu 0 313 3 1735 161 16 35 chr2 240177744 240177879 -10509975 - AluJo SINE Alu -175 137 1 1863 165 21 0 chr2 240177951 240178242 -10509612 + AluSx SINE Alu 1 297 -15 2129 116 0 0 chr2 240178328 240178624 -10509230 + AluSx SINE Alu 6 301 0 2244 133 0 0 chr2 240178942 240179244 -10508610 + AluSx SINE Alu 1 302 -10 293 376 82 15 chr2 240179583 240179926 -10507928 + L2 LINE L2 2871 3236 -36 468 270 63 0 chr2 240180131 240180257 -10507597 - MIR SINE MIR -5 257 124 957 169 26 0 chr2 240180481 240180635 -10507219 - AluSg/x SINE Alu -17 295 138 862 256 9 13 chr2 240180678 240180920 -10506934 + MLT1F1 LTR MaLR 1 234 -321 454 260 167 5 chr2 240180967 240181159 -10506695 + MLT1F1 LTR MaLR 371 593 -2 1985 128 25 0 chr2 240181546 240181852 -10506002 - AluSx SINE Alu 0 313 1 327 203 47 0 chr2 240181857 240181921 -10505933 + MER20 DNA MER1_type 1 67 -152 4928 143 74 55 chr2 240181929 240182749 -10505105 - L1MD2 LINE L1 -16 6343 5456 239 186 0 0 chr2 240182749 240182792 -10505062 + 5S rRNA rRNA 1 43 -78 4928 143 74 55 chr2 240182792 240182999 -10504855 - L1MD2 LINE L1 -903 5456 5254 815 166 11 40 chr2 240183008 240183183 -10504671 + MER20 DNA MER1_type 50 219 0 333 204 34 0 chr2 240183183 240183269 -10504585 + MER20 DNA MER1_type 128 216 -3 346 218 23 0 chr2 240183274 240183361 -10504493 + MER20 DNA MER1_type 131 219 0 332 230 23 0 chr2 240183363 240183450 -10504404 + MER20 DNA MER1_type 131 219 0 * 334 239 22 0 chr2 240183450 240183540 -10504314 + MER20 DNA MER1_type 128 219 0 330 220 33 0 chr2 240183540 240183629 -10504225 + MER20 DNA MER1_type 128 219 0 290 253 33 0 chr2 240183629 240183718 -10504136 + MER20 DNA MER1_type 128 219 0 351 228 22 0 chr2 240183718 240183808 -10504046 + MER20 DNA MER1_type 128 219 0 359 220 22 0 chr2 240183808 240183897 -10503957 + MER20 DNA MER1_type 128 218 -1 328 243 9 36 chr2 240183916 240184027 -10503827 + MER20 DNA MER1_type 112 219 0 312 235 25 0 chr2 240184035 240184116 -10503738 + MER20 DNA MER1_type 137 219 0 241 289 33 0 chr2 240184116 240184204 -10503650 + MER20 DNA MER1_type 128 218 -1 322 230 23 0 chr2 240184207 240184294 -10503560 + MER20 DNA MER1_type 131 219 0 * 329 231 22 0 chr2 240184294 240184383 -10503471 + MER20 DNA MER1_type 128 218 -1 332 234 9 36 chr2 240184402 240184513 -10503341 + MER20 DNA MER1_type 112 219 0 314 227 34 0 chr2 240184513 240184599 -10503255 + MER20 DNA MER1_type 128 216 -3 328 230 23 0 chr2 240184604 240184691 -10503163 + MER20 DNA MER1_type 131 219 0 320 241 23 0 chr2 240184693 240184780 -10503074 + MER20 DNA MER1_type 131 219 0 * 359 228 22 0 chr2 240184780 240184870 -10502984 + MER20 DNA MER1_type 128 219 0 334 239 22 0 chr2 240184870 240184960 -10502894 + MER20 DNA MER1_type 128 219 0 343 218 18 36 chr2 240184978 240185088 -10502766 + MER20 DNA MER1_type 112 219 0 304 242 33 0 chr2 240185088 240185177 -10502677 + MER20 DNA MER1_type 128 219 0 325 220 33 0 chr2 240185177 240185266 -10502588 + MER20 DNA MER1_type 128 219 0 323 242 33 0 chr2 240185266 240185355 -10502499 + MER20 DNA MER1_type 128 219 0 366 228 22 0 chr2 240185355 240185445 -10502409 + MER20 DNA MER1_type 128 219 0 276 238 25 0 chr2 240185492 240185572 -10502282 + MER20 DNA MER1_type 137 218 -1 319 230 23 0 chr2 240185575 240185662 -10502192 + MER20 DNA MER1_type 131 219 0 * 356 228 22 0 chr2 240185662 240185752 -10502102 + MER20 DNA MER1_type 128 219 0 350 209 33 0 chr2 240185752 240185841 -10502013 + MER20 DNA MER1_type 128 219 0 321 207 27 54 chr2 240185859 240185970 -10501884 + MER20 DNA MER1_type 112 219 0 * 329 231 33 0 chr2 240185970 240186059 -10501795 + MER20 DNA MER1_type 128 219 0 328 237 21 0 chr2 240186145 240186238 -10501616 + MER20 DNA MER1_type 125 219 0 290 242 33 0 chr2 240186238 240186327 -10501527 + MER20 DNA MER1_type 128 219 0 349 239 22 0 chr2 240186327 240186417 -10501437 + MER20 DNA MER1_type 128 219 0 305 242 33 0 chr2 240186417 240186506 -10501348 + MER20 DNA MER1_type 128 219 0 354 221 26 18 chr2 240186506 240186595 -10501259 + MER20 DNA MER1_type 130 219 0 367 217 22 0 chr2 240186595 240186685 -10501169 + MER20 DNA MER1_type 128 219 0 372 217 22 0 chr2 240186685 240186775 -10501079 + MER20 DNA MER1_type 128 219 0 345 228 22 0 chr2 240186775 240186865 -10500989 + MER20 DNA MER1_type 128 219 0 353 209 33 0 chr2 240186865 240186954 -10500900 + MER20 DNA MER1_type 128 219 0 371 198 33 0 chr2 240186954 240187043 -10500811 + MER20 DNA MER1_type 128 219 0 306 231 33 0 chr2 240187043 240187132 -10500722 + MER20 DNA MER1_type 128 219 0 344 220 33 0 chr2 240187132 240187221 -10500633 + MER20 DNA MER1_type 128 219 0 263 283 22 0 chr2 240187221 240187311 -10500543 + MER20 DNA MER1_type 128 219 0 338 239 22 0 chr2 240187311 240187401 -10500453 + MER20 DNA MER1_type 128 219 0 332 231 33 0 chr2 240187401 240187490 -10500364 + MER20 DNA MER1_type 128 219 0 353 209 33 0 chr2 240187490 240187579 -10500275 + MER20 DNA MER1_type 128 219 0 367 217 22 0 chr2 240187579 240187669 -10500185 + MER20 DNA MER1_type 128 219 0 338 220 33 0 chr2 240187669 240187758 -10500096 + MER20 DNA MER1_type 128 219 0 304 253 33 0 chr2 240187758 240187847 -10500007 + MER20 DNA MER1_type 128 219 0 354 228 22 0 chr2 240187847 240187937 -10499917 + MER20 DNA MER1_type 128 219 0 309 220 33 0 chr2 240187937 240188026 -10499828 + MER20 DNA MER1_type 128 219 0 303 233 33 0 chr2 240188026 240188114 -10499740 + MER20 DNA MER1_type 128 218 -1 306 241 23 0 chr2 240188117 240188204 -10499650 + MER20 DNA MER1_type 131 219 0 * 344 220 33 0 chr2 240188204 240188293 -10499561 + MER20 DNA MER1_type 128 219 0 322 216 34 0 chr2 240188293 240188379 -10499475 + MER20 DNA MER1_type 128 216 -3 371 207 23 0 chr2 240188384 240188471 -10499383 + MER20 DNA MER1_type 131 219 0 349 234 9 36 chr2 240188489 240188600 -10499254 + MER20 DNA MER1_type 112 219 0 332 231 33 0 chr2 240188600 240188689 -10499165 + MER20 DNA MER1_type 128 219 0 241 289 33 0 chr2 240188689 240188777 -10499077 + MER20 DNA MER1_type 128 218 -1 358 207 23 0 chr2 240188780 240188867 -10498987 + MER20 DNA MER1_type 131 219 0 322 231 33 0 chr2 240188867 240188956 -10498898 + MER20 DNA MER1_type 128 219 0 315 220 33 0 chr2 240188956 240189045 -10498809 + MER20 DNA MER1_type 128 219 0 312 242 33 0 chr2 240189045 240189134 -10498720 + MER20 DNA MER1_type 128 219 0 305 250 22 0 chr2 240189134 240189224 -10498630 + MER20 DNA MER1_type 128 219 0 310 220 33 0 chr2 240189224 240189313 -10498541 + MER20 DNA MER1_type 128 219 0 338 209 33 0 chr2 240189313 240189402 -10498452 + MER20 DNA MER1_type 128 219 0 323 231 33 0 chr2 240189402 240189491 -10498363 + MER20 DNA MER1_type 128 219 0 359 228 22 0 chr2 240189491 240189581 -10498273 + MER20 DNA MER1_type 128 219 0 357 228 22 0 chr2 240189581 240189671 -10498183 + MER20 DNA MER1_type 128 219 0 368 217 26 35 chr2 240189685 240189800 -10498054 + MER20 DNA MER1_type 106 219 0 298 231 33 0 chr2 240189800 240189889 -10497965 + MER20 DNA MER1_type 128 219 0 292 244 44 0 chr2 240189889 240189977 -10497877 + MER20 DNA MER1_type 128 219 0 314 215 25 0 chr2 240189986 240190065 -10497789 + MER20 DNA MER1_type 139 219 0 * 359 220 22 0 chr2 240190065 240190154 -10497700 + MER20 DNA MER1_type 128 218 -1 331 234 9 36 chr2 240190173 240190284 -10497570 + MER20 DNA MER1_type 112 219 0 295 242 33 0 chr2 240190284 240190373 -10497481 + MER20 DNA MER1_type 128 219 0 320 212 30 40 chr2 240190373 240190462 -10497392 + MER20 DNA MER1_type 131 218 -1 314 243 9 36 chr2 240190481 240190592 -10497262 + MER20 DNA MER1_type 112 219 0 314 239 22 0 chr2 240190592 240190682 -10497172 + MER20 DNA MER1_type 128 219 0 305 239 34 0 chr2 240190682 240190768 -10497086 + MER20 DNA MER1_type 128 216 -3 356 207 23 0 chr2 240190773 240190860 -10496994 + MER20 DNA MER1_type 131 219 0 322 231 33 0 chr2 240190860 240190949 -10496905 + MER20 DNA MER1_type 128 219 0 307 231 33 0 chr2 240190949 240191038 -10496816 + MER20 DNA MER1_type 128 219 0 359 228 22 0 chr2 240191038 240191128 -10496726 + MER20 DNA MER1_type 128 219 0 357 228 22 0 chr2 240191128 240191218 -10496636 + MER20 DNA MER1_type 128 219 0 368 217 26 35 chr2 240191232 240191347 -10496507 + MER20 DNA MER1_type 106 219 0 298 231 33 0 chr2 240191347 240191436 -10496418 + MER20 DNA MER1_type 128 219 0 330 231 33 0 chr2 240191436 240191525 -10496329 + MER20 DNA MER1_type 128 219 0 351 228 22 0 chr2 240191525 240191615 -10496239 + MER20 DNA MER1_type 128 219 0 313 231 33 0 chr2 240191615 240191704 -10496150 + MER20 DNA MER1_type 128 219 0 323 242 33 0 chr2 240191704 240191793 -10496061 + MER20 DNA MER1_type 128 219 0 346 220 33 0 chr2 240191793 240191882 -10495972 + MER20 DNA MER1_type 128 219 0 366 228 22 0 chr2 240191882 240191972 -10495882 + MER20 DNA MER1_type 128 219 0 228 263 25 0 chr2 240192019 240192099 -10495755 + MER20 DNA MER1_type 137 218 -1 300 224 47 0 chr2 240192102 240192187 -10495667 + MER20 DNA MER1_type 131 219 0 203 194 0 0 chr2 240192339 240192375 -10495479 + T-rich Low_complexity Low_complexity 1 36 0 844 167 14 0 chr2 240192557 240192734 -10495120 - AluJb SINE Alu 0 315 137 230 314 0 12 chr2 240192738 240192824 -10495030 + L1ME LINE L1 5705 5789 -332 852 229 39 24 chr2 240193308 240193513 -10494341 - MLT1K LTR MaLR -7 581 374 1493 158 24 136 chr2 240195301 240195369 -10492485 - MLT1A1 LTR MaLR 0 365 291 2185 96 14 0 chr2 240195369 240195677 -10492177 + AluSq SINE Alu 1 312 0 1493 158 24 136 chr2 240195677 240196018 -10491836 - MLT1A1 LTR MaLR -74 291 1 805 153 7 15 chr2 240196111 240196248 -10491606 + AluJo SINE Alu 1 136 -176 2277 98 0 10 chr2 240196538 240196833 -10491021 - AluSg SINE Alu -18 292 1 21 0 0 0 chr2 240197267 240197288 -10490566 + AT_rich Low_complexity Low_complexity 1 21 0 2030 132 10 0 chr2 240197545 240197834 -10490020 - AluJb SINE Alu -20 292 1 1681 163 10 35 chr2 240197864 240198152 -10489702 - AluJo SINE Alu -18 294 14 1827 222 79 12 chr2 240198201 240198377 -10489477 - MER119 DNA MER1_type 0 583 420 2062 105 41 10 chr2 240198377 240198671 -10489183 - AluSx SINE Alu -9 303 1 1827 222 79 12 chr2 240198671 240199012 -10488842 - MER119 DNA MER1_type -163 420 31 757 119 8 8 chr2 240199920 240200038 -10487816 - FLAM_C SINE Alu -15 118 1 403 306 82 60 chr2 240200057 240200178 -10487676 + L2 LINE L2 3074 3191 -122 2277 101 7 0 chr2 240200178 240200474 -10487380 + AluSq SINE Alu 1 298 -15 403 306 82 60 chr2 240200474 240200584 -10487270 + L2 LINE L2 3191 3310 -3 184 281 87 61 chr2 240200812 240201043 -10486811 - L2 LINE L2 -1439 1875 1639 2393 93 0 3 chr2 240201113 240201414 -10486440 - AluSg SINE Alu -10 300 1 2148 128 7 0 chr2 240201414 240201718 -10486136 - AluSq SINE Alu -6 307 1 409 195 76 42 chr2 240202274 240202392 -10485462 + MER5A DNA MER1_type 1 122 -67 2489 88 0 0 chr2 240202954 240203249 -10484605 + AluSg SINE Alu 1 295 -15 941 165 19 6 chr2 240203256 240203440 -10484414 + FRAM SINE Alu 1 178 0 956 121 157 6 chr2 240203460 240203626 -10484228 - AluY SINE Alu -2 309 119 1798 158 0 14 chr2 240203635 240203926 -10483928 - AluJb SINE Alu -1 311 25 2232 89 3 43 chr2 240203975 240204301 -10483553 + AluSx SINE Alu 1 312 0 2161 90 52 7 chr2 240204571 240204860 -10482994 + AluSq SINE Alu 2 303 -10 21 71 0 0 chr2 240205452 240205494 -10482360 + AT_rich Low_complexity Low_complexity 1 42 0 375 316 71 19 chr2 240206458 240206613 -10481241 + MLT1K LTR MaLR 15 177 -411 229 241 0 17 chr2 240206727 240206785 -10481069 + LTR67 LTR ERVL 501 557 0 2563 61 0 6 chr2 240206936 240207249 -10480605 + AluY SINE Alu 1 311 0 244 260 0 0 chr2 240207263 240207313 -10480541 + Tigger5 DNA MER2_type 6 55 -2268 308 148 0 0 chr2 240207318 240207372 -10480482 + Tigger5 DNA MER2_type 2232 2285 -38 2512 70 0 19 chr2 240207565 240207877 -10479977 + AluY SINE Alu 1 306 -5 1804 80 12 95 chr2 240207968 240208356 -10479498 + AluY SINE Alu 1 360 0 21 57 0 0 chr2 240208393 240208428 -10479426 + AT_rich Low_complexity Low_complexity 1 35 0 352 339 62 40 chr2 240208442 240208666 -10479188 + L2 LINE L2 2658 2886 -428 2192 90 0 47 chr2 240209077 240209398 -10478456 - AluSx SINE Alu -6 306 1 1753 196 29 9 chr2 240209637 240209979 -10477875 + MLT1A1 LTR MaLR 5 353 -12 921 93 8 8 chr2 240210190 240210319 -10477535 + AluSq/x SINE Alu 21 149 -163 2230 92 3 0 chr2 240210365 240210659 -10477195 + AluSp SINE Alu 1 295 -18 1340 220 0 10 chr2 240211166 240211466 -10476388 - AluJo SINE Alu -15 297 1 1612 147 0 8 chr2 240211690 240211948 -10475906 - AluJb SINE Alu -18 294 39 1938 101 35 0 chr2 240212027 240212315 -10475539 - AluSq SINE Alu -15 298 1 333 220 21 142 chr2 240212418 240212559 -10475295 + L1ME4a LINE L1 5828 5951 -170 551 47 0 0 chr2 240212610 240212674 -10475180 + U6 snRNA snRNA 1 64 -43 214 205 0 0 chr2 240212838 240212877 -10474977 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 216 97 0 0 chr2 240212888 240212919 -10474935 + (TAGA)n Simple_repeat Simple_repeat 1 31 0 1253 162 54 25 chr2 240212919 240213160 -10474694 - AluJo SINE Alu -64 248 1 940 165 41 12 chr2 240213223 240213393 -10474461 + MER5B DNA MER1_type 1 175 -3 698 206 133 0 chr2 240213455 240213610 -10474244 - MER5A DNA MER1_type -6 183 5 1792 155 7 0 chr2 240213759 240214055 -10473799 + AluJo SINE Alu 1 298 -14 364 307 82 78 chr2 240215044 240215301 -10472553 - MIR SINE MIR -1 261 4 2331 63 0 7 chr2 240215900 240216199 -10471655 - AluY SINE Alu -14 297 1 239 350 50 0 chr2 240216529 240216629 -10471225 - MIR SINE MIR -138 124 20 1912 130 3 20 chr2 240217063 240217364 -10470490 - AluJb SINE Alu -7 305 10 1979 108 10 29 chr2 240217618 240217925 -10469929 - AluSx SINE Alu -11 301 1 2174 98 0 0 chr2 240218101 240218397 -10469457 - AluSq SINE Alu -17 296 1 209 318 0 15 chr2 240218474 240218540 -10469314 - MIR SINE MIR -123 85 21 342 229 0 0 chr2 240218757 240218853 -10469001 + (CA)n Simple_repeat Simple_repeat 1 96 0 888 145 0 0 chr2 240218854 240218985 -10468869 - FRAM SINE Alu -24 152 22 214 259 69 0 chr2 240219600 240219658 -10468196 - L3 LINE CR1 -177 1400 1339 1314 154 4 61 chr2 240219763 240219899 -10467955 + AluJb SINE Alu 1 118 -194 2190 115 0 0 chr2 240219899 240220195 -10467659 + AluSq SINE Alu 1 296 -17 1314 154 4 61 chr2 240220195 240220304 -10467550 + AluJb SINE Alu 118 232 -80 834 100 306 18 chr2 240220326 240220496 -10467358 - AluSg1 SINE Alu -89 220 2 277 261 162 9 chr2 240220631 240220742 -10467112 + MIR SINE MIR 89 216 -46 517 289 114 84 chr2 240221082 240221511 -10466343 - L3 LINE CR1 -5 1572 1131 1551 166 45 14 chr2 240222184 240222474 -10465380 + AluJb SINE Alu 1 299 -13 1111 100 7 0 chr2 240223143 240223328 -10464526 - AluSg/x SINE Alu 0 319 134 24 77 0 0 chr2 240223444 240223496 -10464358 + AT_rich Low_complexity Low_complexity 1 52 0 2043 115 3 0 chr2 240223505 240223800 -10464054 - AluY SINE Alu -15 296 1 654 188 0 0 chr2 240223811 240223912 -10463942 - FLAM_A SINE Alu -41 101 1 2107 96 10 17 chr2 240223944 240224245 -10463609 + AluSx SINE Alu 1 299 -13 789 191 0 0 chr2 240224260 240224391 -10463463 + FLAM_A SINE Alu 3 133 0 1007 189 0 0 chr2 240224522 240224686 -10463168 - AluSg/x SINE Alu -20 290 127 396 288 96 28 chr2 240225002 240225179 -10462675 - MIR SINE MIR -55 207 19 2209 105 0 13 chr2 240226834 240227149 -10460705 + AluSx SINE Alu 1 311 -1 865 239 30 57 chr2 240227682 240227838 -10460016 + HAL1 LINE L1 668 827 -1680 1763 131 0 0 chr2 240227838 240228090 -10459764 - AluSx SINE Alu -18 294 43 865 239 30 57 chr2 240228090 240228268 -10459586 + HAL1 LINE L1 827 993 -1514 22 0 0 0 chr2 240228286 240228308 -10459546 + AT_rich Low_complexity Low_complexity 1 22 0 891 197 153 72 chr2 240228462 240228601 -10459253 + HAL1 LINE L1 1031 1157 -1350 1908 148 7 0 chr2 240228601 240228904 -10458950 + AluJb SINE Alu 1 305 -7 891 197 153 72 chr2 240228904 240229059 -10458795 + HAL1 LINE L1 1157 1298 -1209 1974 68 100 0 chr2 240229059 240229339 -10458515 + AluSp SINE Alu 1 308 -5 891 197 153 72 chr2 240229339 240229541 -10458313 + HAL1 LINE L1 1298 1568 -939 1984 269 69 35 chr2 240229571 240230321 -10457533 + HAL1 LINE L1 1681 2461 -46 2193 90 7 3 chr2 240230321 240230620 -10457234 - AluSp SINE Alu -13 300 1 1984 269 69 35 chr2 240230620 240230668 -10457186 + HAL1 LINE L1 2461 2506 -1 2197 81 7 23 chr2 240231342 240231652 -10456202 + AluSc SINE Alu 1 305 -4 2242 73 10 3 chr2 240232628 240232931 -10454923 - AluSp SINE Alu -8 305 1 25 31 0 0 chr2 240232958 240232990 -10454864 + AT_rich Low_complexity Low_complexity 1 32 0 1000 92 224 51 chr2 240234208 240234323 -10453531 - MER30 DNA MER1_type 0 230 136 2044 117 0 16 chr2 240234323 240234640 -10453214 - AluSx SINE Alu 0 312 1 1000 92 224 51 chr2 240234640 240234720 -10453134 - MER30 DNA MER1_type -94 136 1 214 324 14 27 chr2 240234870 240235018 -10452836 + GA-rich Low_complexity Low_complexity 1 146 0 2378 61 0 3 chr2 240235292 240235588 -10452266 - AluSq SINE Alu -18 295 1 234 239 113 0 chr2 240235634 240235705 -10452149 + MIR SINE MIR 184 262 0 419 231 205 19 chr2 240235742 240235898 -10451956 + L2 LINE L2 2621 2805 -509 1281 84 6 28 chr2 240236085 240236264 -10451590 + THE1A LTR MaLR 181 355 0 9167 88 29 1 chr2 240236264 240237493 -10450361 + THE1A-int LTR MaLR 1 1264 -316 1083 132 0 23 chr2 240237613 240237787 -10450067 + AluSq SINE Alu 129 298 -15 2835 179 64 18 chr2 240237787 240238043 -10449811 - MER6 DNA MER2_type -202 663 420 1893 138 7 7 chr2 240238043 240238334 -10449520 - AluSx SINE Alu -21 291 1 2835 179 64 18 chr2 240238334 240238680 -10449174 - MER6 DNA MER2_type -445 420 3 289 57 0 0 chr2 240238680 240238715 -10449139 + MLT1B LTR MaLR 356 390 0 578 288 6 18 chr2 240238722 240238885 -10448969 - MIR SINE MIR -50 212 52 1414 184 15 4 chr2 240239005 240239271 -10448583 + AluJo SINE Alu 1 269 -43 765 123 0 0 chr2 240239272 240239378 -10448476 + AluJo/FRAM SINE Alu 194 299 -13 296 194 26 0 chr2 240240729 240240802 -10447052 + MIR SINE MIR 42 118 -90 227 250 0 0 chr2 240240808 240240852 -10447002 + MIR SINE MIR 219 262 0 2006 102 17 10 chr2 240241018 240241311 -10446543 + AluSq SINE Alu 1 295 -18 1984 138 0 7 chr2 240241318 240241623 -10446231 + AluJb SINE Alu 1 303 -9 1874 221 26 2 chr2 240241635 240242060 -10445794 + L1MD2 LINE L1 5922 6356 -3 234 91 0 0 chr2 240242446 240242479 -10445375 + (CA)n Simple_repeat Simple_repeat 1 33 0 2191 107 3 0 chr2 240242623 240242922 -10444932 - AluSx SINE Alu -12 300 1 2286 93 0 3 chr2 240243177 240243489 -10444365 + AluSx SINE Alu 1 311 -1 393 207 0 0 chr2 240243489 240243576 -10444278 + GA-rich Low_complexity Low_complexity 1 87 0 1237 56 11 11 chr2 240243581 240243760 -10444094 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 1534 153 62 14 chr2 240243760 240244029 -10443825 + MER1B DNA MER1_type 58 339 0 2131 178 60 5 chr2 240244038 240244438 -10443416 + LOR1b LTR ERV1 40 461 0 600 298 55 0 chr2 240244479 240244660 -10443194 + MIR SINE MIR 70 260 -2 1250 195 58 58 chr2 240244699 240245047 -10442807 - MER21B LTR ERV1 -48 815 468 954 133 0 42 chr2 240245048 240245213 -10442641 - FRAM SINE Alu -16 160 3 1460 220 47 103 chr2 240245214 240245701 -10442153 - MER21B LTR ERV1 -392 471 12 400 216 9 36 chr2 240245836 240245947 -10441907 - MER20 DNA MER1_type 0 219 112 383 235 10 20 chr2 240245965 240246067 -10441787 - MER20 DNA MER1_type 0 219 119 324 232 9 45 chr2 240246094 240246206 -10441648 - MER20 DNA MER1_type 0 219 112 333 252 9 36 chr2 240246224 240246335 -10441519 - MER20 DNA MER1_type 0 219 112 352 243 9 36 chr2 240246353 240246464 -10441390 - MER20 DNA MER1_type 0 219 112 381 207 18 45 chr2 240246482 240246593 -10441261 - MER20 DNA MER1_type 0 219 112 343 242 22 0 chr2 240246612 240246703 -10441151 - MER20 DNA MER1_type -1 218 126 338 225 12 0 chr2 240246740 240246820 -10441034 - MER20 DNA MER1_type 0 219 139 311 227 34 0 chr2 240246834 240246920 -10440934 - MER20 DNA MER1_type -3 216 128 363 209 33 0 chr2 240246920 240247009 -10440845 - MER20 DNA MER1_type 0 219 128 326 231 33 0 chr2 240247009 240247098 -10440756 - MER20 DNA MER1_type 0 219 128 339 220 33 0 chr2 240247098 240247187 -10440667 - MER20 DNA MER1_type 0 219 128 239 264 23 0 chr2 240247187 240247274 -10440580 - MER20 DNA MER1_type 0 219 131 310 242 33 0 chr2 240247276 240247365 -10440489 - MER20 DNA MER1_type 0 219 128 364 227 11 0 chr2 240247365 240247453 -10440401 - MER20 DNA MER1_type 0 219 131 328 250 22 0 chr2 240247494 240247584 -10440270 - MER20 DNA MER1_type 0 219 128 351 228 20 20 chr2 240247584 240247685 -10440169 - MER20 DNA MER1_type 0 219 119 323 242 33 0 chr2 240247712 240247801 -10440053 - MER20 DNA MER1_type 0 219 128 286 253 23 0 chr2 240247801 240247888 -10439966 - MER20 DNA MER1_type 0 219 131 332 222 33 0 chr2 240247891 240247979 -10439875 - MER20 DNA MER1_type -1 218 128 325 231 33 0 chr2 240247979 240248068 -10439786 - MER20 DNA MER1_type 0 219 128 362 228 22 0 chr2 240248068 240248158 -10439696 - MER20 DNA MER1_type 0 219 128 326 242 33 0 chr2 240248158 240248247 -10439607 - MER20 DNA MER1_type 0 219 128 342 203 25 0 chr2 240248247 240248326 -10439528 - MER20 DNA MER1_type 0 219 139 315 226 19 38 chr2 240248340 240248446 -10439408 - MER20 DNA MER1_type -4 215 112 350 250 22 0 chr2 240248464 240248554 -10439300 - MER20 DNA MER1_type 0 219 128 367 209 33 0 chr2 240248554 240248643 -10439211 - MER20 DNA MER1_type 0 219 128 351 237 26 18 chr2 240248643 240248732 -10439122 - MER20 DNA MER1_type 0 219 130 319 231 33 0 chr2 240248732 240248821 -10439033 - MER20 DNA MER1_type 0 219 128 382 216 9 36 chr2 240248821 240248932 -10438922 - MER20 DNA MER1_type 0 219 112 306 253 33 0 chr2 240248950 240249039 -10438815 - MER20 DNA MER1_type 0 219 128 424 196 22 0 chr2 240249039 240249129 -10438725 - MER20 DNA MER1_type 0 219 128 316 233 44 0 chr2 240249129 240249217 -10438637 - MER20 DNA MER1_type 0 219 128 381 246 18 18 chr2 240249217 240249307 -10438547 - MER20 DNA MER1_type 0 219 130 345 220 33 0 chr2 240249307 240249396 -10438458 - MER20 DNA MER1_type 0 219 128 341 220 33 0 chr2 240249396 240249485 -10438369 - MER20 DNA MER1_type 0 219 128 373 217 22 0 chr2 240249485 240249575 -10438279 - MER20 DNA MER1_type 0 219 128 366 209 33 0 chr2 240249575 240249664 -10438190 - MER20 DNA MER1_type 0 219 128 341 231 33 0 chr2 240249664 240249753 -10438101 - MER20 DNA MER1_type 0 219 128 348 239 22 0 chr2 240249753 240249843 -10438011 - MER20 DNA MER1_type 0 219 128 275 250 33 11 chr2 240249843 240249933 -10437921 - MER20 DNA MER1_type 0 219 128 335 209 44 11 chr2 240249933 240250022 -10437832 - MER20 DNA MER1_type 0 219 128 317 231 33 0 chr2 240250022 240250111 -10437743 - MER20 DNA MER1_type 0 219 128 317 231 33 0 chr2 240250111 240250200 -10437654 - MER20 DNA MER1_type 0 219 128 385 198 33 0 chr2 240250200 240250289 -10437565 - MER20 DNA MER1_type 0 219 128 334 239 22 0 chr2 240250289 240250379 -10437475 - MER20 DNA MER1_type 0 219 128 319 242 33 0 chr2 240250379 240250468 -10437386 - MER20 DNA MER1_type 0 219 128 346 234 9 36 chr2 240250468 240250579 -10437275 - MER20 DNA MER1_type 0 219 112 325 218 18 45 chr2 240250598 240250708 -10437146 - MER20 DNA MER1_type -1 218 112 340 234 9 36 chr2 240250815 240250926 -10436928 - MER20 DNA MER1_type 0 219 112 341 231 33 0 chr2 240250944 240251033 -10436821 - MER20 DNA MER1_type 0 219 128 366 209 33 0 chr2 240251033 240251122 -10436732 - MER20 DNA MER1_type 0 219 128 328 230 23 0 chr2 240251122 240251209 -10436645 - MER20 DNA MER1_type 0 219 131 322 227 34 0 chr2 240251214 240251300 -10436554 - MER20 DNA MER1_type -3 216 128 343 234 9 36 chr2 240251300 240251411 -10436443 - MER20 DNA MER1_type 0 219 112 384 218 9 36 chr2 240251430 240251540 -10436314 - MER20 DNA MER1_type -1 218 112 244 241 54 36 chr2 240251558 240251646 -10436208 - MER20 DNA MER1_type 0 219 130 324 217 22 22 chr2 240251646 240251735 -10436119 - MER20 DNA MER1_type 0 219 131 311 250 22 0 chr2 240251735 240251825 -10436029 - MER20 DNA MER1_type 0 219 128 225 227 45 64 chr2 240251825 240251935 -10435919 - MER20 DNA MER1_type 0 219 112 410 206 22 0 chr2 240251953 240252043 -10435811 - MER20 DNA MER1_type 0 219 128 377 225 9 36 chr2 240252043 240252154 -10435700 - MER20 DNA MER1_type 0 219 112 301 242 33 0 chr2 240252172 240252261 -10435593 - MER20 DNA MER1_type 0 219 128 288 220 44 11 chr2 240252261 240252350 -10435504 - MER20 DNA MER1_type 0 219 128 392 216 9 36 chr2 240252350 240252461 -10435393 - MER20 DNA MER1_type 0 219 112 381 227 9 36 chr2 240252480 240252590 -10435264 - MER20 DNA MER1_type -1 218 112 382 216 9 36 chr2 240252697 240252808 -10435046 - MER20 DNA MER1_type 0 219 112 281 264 33 0 chr2 240252826 240252915 -10434939 - MER20 DNA MER1_type 0 219 128 261 207 35 0 chr2 240252915 240252973 -10434881 - MER20 DNA MER1_type 0 219 160 2067 109 10 0 chr2 240253666 240253959 -10433895 - AluSx SINE Alu -10 302 7 23 0 0 0 chr2 240254914 240254937 -10432917 + AT_rich Low_complexity Low_complexity 1 23 0 342 362 114 0 chr2 240255461 240255610 -10432244 + L2 LINE L2 3092 3257 -15 241 332 77 43 chr2 240255598 240255806 -10432048 + L3b LINE CR1 1141 1355 -228 * 185 218 55 55 chr2 240255893 240255948 -10431906 + MIR3 SINE MIR 133 187 -21 2764 7 0 0 chr2 240256262 240256568 -10431286 - AluYb8 SINE Alu -12 306 1 216 0 0 0 chr2 240256583 240256607 -10431247 + (CAA)n Simple_repeat Simple_repeat 2 25 0 279 333 88 0 chr2 240257110 240257224 -10430630 - L3 LINE CR1 -18 1559 1436 2037 125 7 0 chr2 240257740 240258043 -10429811 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr2 240258193 240258214 -10429640 + AT_rich Low_complexity Low_complexity 1 21 0 466 252 47 16 chr2 240258564 240258691 -10429163 + MIR SINE MIR 24 154 -108 515 269 32 19 chr2 240258691 240258951 -10428903 - MER46C DNA MER2_type 0 338 4 281 303 13 0 chr2 240259192 240259268 -10428586 + C-rich Low_complexity Low_complexity 5 81 0 229 322 58 23 chr2 240259422 240259509 -10428345 + L2 LINE L2 3183 3272 0 1646 145 10 39 chr2 240260283 240260450 -10427404 - AluSx SINE Alu -9 303 148 2124 97 10 3 chr2 240260450 240260749 -10427105 - AluSq SINE Alu -12 301 1 1646 145 10 39 chr2 240260749 240260891 -10426963 - AluSx SINE Alu -164 148 3 235 273 39 0 chr2 240263223 240263300 -10424554 + L1MC4 LINE L1 7932 8011 -31 2298 70 10 0 chr2 240263416 240263717 -10424137 - AluSp SINE Alu -9 304 1 2256 96 0 0 chr2 240263782 240264085 -10423769 - AluSg SINE Alu -7 303 1 181 330 175 10 chr2 240265416 240265513 -10422341 + L2 LINE L2 3156 3268 -4 664 146 0 0 chr2 240265678 240265774 -10422080 + AluJ/FLAM SINE Alu 2 97 -215 1172 189 16 109 chr2 240266974 240267296 -10420558 - AluJo SINE Alu -10 292 1 2147 95 3 10 chr2 240267299 240267603 -10420251 - AluSq SINE Alu -11 302 1 265 320 71 24 chr2 240268055 240268308 -10419546 + L3 LINE CR1 1153 1417 -160 2336 70 0 0 chr2 240269777 240270075 -10417779 - AluY SINE Alu -13 298 1 670 208 0 46 chr2 240270581 240270711 -10417143 + FLAM_A SINE Alu 1 124 -9 236 133 17 0 chr2 240270942 240271002 -10416852 + (TA)n Simple_repeat Simple_repeat 2 62 0 913 151 7 0 chr2 240271013 240271152 -10416702 - FRAM SINE Alu -36 140 1 1545 190 0 29 chr2 240271157 240271473 -10416381 - AluJo SINE Alu -5 307 1 1833 171 0 9 chr2 240271792 240272107 -10415747 + AluJb SINE Alu 1 312 0 320 317 33 71 chr2 240272209 240272392 -10415462 + L1ME LINE L1 5561 5736 -385 456 227 117 0 chr2 240272565 240272719 -10415135 - HAL1b LINE L1 -693 655 484 24 0 0 0 chr2 240274182 240274206 -10413648 + AT_rich Low_complexity Low_complexity 1 24 0 453 19 0 0 chr2 240274323 240274377 -10413477 + (TG)n Simple_repeat Simple_repeat 2 55 0 816 186 0 0 chr2 240274945 240275074 -10412780 + FLAM_C SINE Alu 2 130 -13 238 282 132 64 chr2 240275325 240275524 -10412330 - MIR SINE MIR -38 224 16 677 279 62 26 chr2 240277182 240277522 -10410332 + MER20B DNA MER1_type 431 782 -1 348 323 191 18 chr2 240278175 240278689 -10409165 + L2 LINE L2 1712 2314 -1000 1838 142 37 81 chr2 240278745 240278953 -10408901 - MLT1B LTR MaLR 0 390 207 1854 133 0 7 chr2 240278953 240279238 -10408616 - AluJb SINE Alu -29 283 1 1838 142 37 81 chr2 240279238 240279437 -10408417 - MLT1B LTR MaLR -183 207 1 14427 110 82 12 chr2 240279520 240280084 -10407770 - Tigger1 DNA MER2_type 0 2418 1894 2112 122 0 0 chr2 240280084 240280388 -10407466 - AluSq SINE Alu -9 304 1 14427 110 82 12 chr2 240280388 240280835 -10407019 - Tigger1 DNA MER2_type -524 1894 1479 1724 138 20 13 chr2 240280835 240281133 -10406721 + AluSx SINE Alu 1 300 -12 14427 110 82 12 chr2 240281133 240282378 -10405476 - Tigger1 DNA MER2_type -939 1479 5 1581 161 16 35 chr2 240282463 240282637 -10405217 - AluJo SINE Alu -8 304 137 2097 112 3 10 chr2 240282637 240282950 -10404904 - AluSp SINE Alu 0 313 3 1581 161 16 35 chr2 240282950 240283085 -10404769 - AluJo SINE Alu -175 137 1 1711 165 21 0 chr2 240283157 240283448 -10404406 + AluSx SINE Alu 1 297 -15 1981 116 0 0 chr2 240283534 240283830 -10404024 + AluSx SINE Alu 6 301 0 2164 128 0 0 chr2 240284148 240284460 -10403394 + AluSx SINE Alu 1 312 0 330 376 82 15 chr2 240284801 240285144 -10402710 + L2 LINE L2 2871 3236 -36 490 270 63 0 chr2 240285349 240285475 -10402379 - MIR SINE MIR -5 257 124 876 169 26 0 chr2 240285699 240285853 -10402001 - AluSg/x SINE Alu -17 295 138 881 255 10 13 chr2 240285896 240286138 -10401716 + MLT1F1 LTR MaLR 1 234 -321 471 260 167 5 chr2 240286185 240286377 -10401477 + MLT1F1 LTR MaLR 371 593 -2 255 31 0 0 chr2 240286763 240286795 -10401059 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1837 108 27 0 chr2 240286811 240287069 -10400785 - AluSq SINE Alu -48 265 1 341 203 47 0 chr2 240287074 240287138 -10400716 + MER20 DNA MER1_type 1 67 -152 5190 142 74 55 chr2 240287146 240287966 -10399888 - L1MD2 LINE L1 -16 6343 5456 249 186 0 0 chr2 240287966 240288009 -10399845 + 5S rRNA rRNA 1 43 -78 5190 142 74 55 chr2 240288009 240288216 -10399638 - L1MD2 LINE L1 -903 5456 5254 847 166 11 40 chr2 240288225 240288400 -10399454 + MER20 DNA MER1_type 50 219 0 370 198 33 0 chr2 240288400 240288489 -10399365 + MER20 DNA MER1_type 128 219 0 379 217 22 0 chr2 240288489 240288579 -10399275 + MER20 DNA MER1_type 128 219 0 384 217 22 0 chr2 240288579 240288669 -10399185 + MER20 DNA MER1_type 128 219 0 331 239 22 0 chr2 240288669 240288759 -10399095 + MER20 DNA MER1_type 128 219 0 366 209 33 0 chr2 240288759 240288848 -10399006 + MER20 DNA MER1_type 128 219 0 366 209 33 0 chr2 240288848 240288937 -10398917 + MER20 DNA MER1_type 128 219 0 341 231 33 0 chr2 240288937 240289026 -10398828 + MER20 DNA MER1_type 128 219 0 340 234 9 36 chr2 240289044 240289155 -10398699 + MER20 DNA MER1_type 112 219 0 313 231 33 0 chr2 240289155 240289244 -10398610 + MER20 DNA MER1_type 128 219 0 319 221 18 71 chr2 240289244 240289333 -10398521 + MER20 DNA MER1_type 137 219 0 358 220 33 0 chr2 240289333 240289422 -10398432 + MER20 DNA MER1_type 128 219 0 378 228 22 0 chr2 240289422 240289512 -10398342 + MER20 DNA MER1_type 128 219 0 233 263 25 0 chr2 240289559 240289639 -10398215 + MER20 DNA MER1_type 137 218 -1 327 230 23 0 chr2 240289642 240289729 -10398125 + MER20 DNA MER1_type 131 219 0 * 337 239 22 0 chr2 240289729 240289819 -10398035 + MER20 DNA MER1_type 128 219 0 366 209 33 0 chr2 240289819 240289908 -10397946 + MER20 DNA MER1_type 128 219 0 339 239 22 0 chr2 240289908 240289998 -10397856 + MER20 DNA MER1_type 128 219 0 361 228 22 0 chr2 240289998 240290088 -10397766 + MER20 DNA MER1_type 128 219 0 372 225 9 36 chr2 240290106 240290217 -10397637 + MER20 DNA MER1_type 112 219 0 * 373 220 33 0 chr2 240290217 240290306 -10397548 + MER20 DNA MER1_type 128 219 0 349 220 33 0 chr2 240290306 240290395 -10397459 + MER20 DNA MER1_type 128 219 0 372 220 22 0 chr2 240290395 240290484 -10397370 + MER20 DNA MER1_type 128 218 -1 360 234 9 36 chr2 240290503 240290614 -10397240 + MER20 DNA MER1_type 112 219 0 320 220 44 11 chr2 240290614 240290703 -10397151 + MER20 DNA MER1_type 128 219 0 244 289 33 0 chr2 240290703 240290791 -10397063 + MER20 DNA MER1_type 128 218 -1 336 203 25 0 chr2 240290802 240290881 -10396973 + MER20 DNA MER1_type 139 219 0 332 220 33 0 chr2 240290881 240290970 -10396884 + MER20 DNA MER1_type 128 219 0 295 253 33 0 chr2 240290970 240291059 -10396795 + MER20 DNA MER1_type 128 219 0 328 205 48 0 chr2 240291065 240291148 -10396706 + MER20 DNA MER1_type 133 219 0 244 289 33 0 chr2 240291148 240291236 -10396618 + MER20 DNA MER1_type 128 218 -1 336 203 25 0 chr2 240291247 240291326 -10396528 + MER20 DNA MER1_type 139 219 0 294 264 22 0 chr2 240291326 240291415 -10396439 + MER20 DNA MER1_type 128 218 -1 281 251 70 20 chr2 240292905 240293040 -10394814 - MIR SINE MIR -61 147 56 1971 119 10 0 chr2 240293207 240293500 -10394354 - AluSx SINE Alu -3 309 14 1269 182 4 0 chr2 240293529 240293760 -10394094 - L1MB3 LINE L1 -45 6138 5907 1001 168 6 0 chr2 240293762 240293935 -10393919 - FRAM SINE Alu -5 171 1 1730 176 79 0 chr2 240293937 240294267 -10393587 - L1MB3 LINE L1 -265 5906 5551 365 291 10 0 chr2 240294735 240294838 -10393016 + L2 LINE L2 3168 3271 -1 4301 114 63 80 chr2 240295774 240295937 -10391917 - L1PA16 LINE L1 -2 6164 6000 2378 44 7 3 chr2 240295937 240296233 -10391621 - AluY SINE Alu -14 297 1 4301 114 63 80 chr2 240296233 240296930 -10390924 - L1PA16 LINE L1 -166 6000 5319 1958 181 58 23 chr2 240297042 240297340 -10390514 - L1PA16 LINE L1 -831 5315 4998 1780 160 10 3 chr2 240297340 240297634 -10390220 - AluJb SINE Alu -16 296 1 1958 181 58 23 chr2 240297634 240297847 -10390007 - L1PA16 LINE L1 -1148 4998 4794 335 286 164 23 chr2 240299207 240299378 -10388476 - L2 LINE L2 0 3313 3119 781 188 14 14 chr2 240299468 240299612 -10388242 - AluJb SINE Alu -47 265 122 2085 123 0 3 chr2 240299771 240300079 -10387775 - AluSx SINE Alu 0 312 6 1444 167 3 96 chr2 240300092 240300404 -10387450 - AluJo SINE Alu -25 287 5 25 31 0 0 chr2 240301491 240301523 -10386331 + AT_rich Low_complexity Low_complexity 1 32 0 2027 224 67 30 chr2 240301540 240301712 -10386142 - L1ME1 LINE L1 -5 6161 5997 2266 84 7 0 chr2 240301712 240302009 -10385845 - AluY SINE Alu -12 299 1 2027 224 67 30 chr2 240302009 240302407 -10385447 - L1ME1 LINE L1 -169 5997 5570 652 116 157 16 chr2 240302444 240302565 -10385289 + THE1C LTR MaLR 1 138 -237 357 220 33 0 chr2 240302716 240302807 -10385047 + MER20 DNA MER1_type 126 219 0 341 231 33 0 chr2 240302807 240302896 -10384958 + MER20 DNA MER1_type 128 219 0 333 231 33 0 chr2 240302896 240302985 -10384869 + MER20 DNA MER1_type 128 219 0 326 220 33 0 chr2 240302985 240303074 -10384780 + MER20 DNA MER1_type 128 219 0 300 253 33 0 chr2 240303074 240303163 -10384691 + MER20 DNA MER1_type 128 219 0 314 250 22 0 chr2 240303163 240303253 -10384601 + MER20 DNA MER1_type 128 219 0 321 220 33 0 chr2 240303253 240303342 -10384512 + MER20 DNA MER1_type 128 219 0 349 209 33 0 chr2 240303342 240303431 -10384423 + MER20 DNA MER1_type 128 219 0 333 231 33 0 chr2 240303431 240303520 -10384334 + MER20 DNA MER1_type 128 219 0 370 228 22 0 chr2 240303520 240303610 -10384244 + MER20 DNA MER1_type 128 219 0 369 228 22 0 chr2 240303610 240303700 -10384154 + MER20 DNA MER1_type 128 219 0 374 226 26 35 chr2 240303714 240303829 -10384025 + MER20 DNA MER1_type 106 219 0 240 253 38 0 chr2 240303829 240303906 -10383948 + MER20 DNA MER1_type 128 207 -12 306 253 25 0 chr2 240303925 240304004 -10383850 + MER20 DNA MER1_type 139 219 0 297 231 33 0 chr2 240304004 240304093 -10383761 + MER20 DNA MER1_type 128 219 0 355 209 33 0 chr2 240304093 240304182 -10383672 + MER20 DNA MER1_type 128 219 0 337 231 33 0 chr2 240304182 240304271 -10383583 + MER20 DNA MER1_type 128 219 0 370 228 22 0 chr2 240304271 240304361 -10383493 + MER20 DNA MER1_type 128 219 0 372 228 22 0 chr2 240304361 240304451 -10383403 + MER20 DNA MER1_type 128 219 0 369 228 22 0 chr2 240304451 240304541 -10383313 + MER20 DNA MER1_type 128 219 0 382 217 26 35 chr2 240304555 240304670 -10383184 + MER20 DNA MER1_type 106 219 0 307 231 33 0 chr2 240304670 240304759 -10383095 + MER20 DNA MER1_type 128 219 0 340 231 33 0 chr2 240304759 240304848 -10383006 + MER20 DNA MER1_type 128 219 0 362 228 22 0 chr2 240304848 240304938 -10382916 + MER20 DNA MER1_type 128 219 0 321 231 33 0 chr2 240304938 240305027 -10382827 + MER20 DNA MER1_type 128 219 0 319 221 18 71 chr2 240305027 240305116 -10382738 + MER20 DNA MER1_type 137 219 0 358 220 33 0 chr2 240305116 240305205 -10382649 + MER20 DNA MER1_type 128 219 0 348 220 33 0 chr2 240305205 240305294 -10382560 + MER20 DNA MER1_type 128 219 0 295 253 33 0 chr2 240305294 240305383 -10382471 + MER20 DNA MER1_type 128 219 0 362 228 22 0 chr2 240305383 240305473 -10382381 + MER20 DNA MER1_type 128 219 0 372 220 22 0 chr2 240305473 240305562 -10382292 + MER20 DNA MER1_type 128 218 -1 336 243 9 36 chr2 240305581 240305692 -10382162 + MER20 DNA MER1_type 112 219 0 328 205 48 0 chr2 240305698 240305781 -10382073 + MER20 DNA MER1_type 133 219 0 244 289 33 0 chr2 240305781 240305869 -10381985 + MER20 DNA MER1_type 128 218 -1 336 203 25 0 chr2 240305880 240305959 -10381895 + MER20 DNA MER1_type 139 219 0 309 253 22 0 chr2 240305959 240306048 -10381806 + MER20 DNA MER1_type 128 218 -1 343 234 9 36 chr2 240306067 240306178 -10381676 + MER20 DNA MER1_type 112 219 0 325 227 34 0 chr2 240306178 240306264 -10381590 + MER20 DNA MER1_type 128 216 -3 336 230 23 0 chr2 240306269 240306356 -10381498 + MER20 DNA MER1_type 131 219 0 342 230 23 0 chr2 240306358 240306445 -10381409 + MER20 DNA MER1_type 131 219 0 * 370 228 22 0 chr2 240306445 240306535 -10381319 + MER20 DNA MER1_type 128 219 0 345 239 22 0 chr2 240306535 240306625 -10381229 + MER20 DNA MER1_type 128 219 0 360 211 35 35 chr2 240306639 240306753 -10381101 + MER20 DNA MER1_type 106 219 0 339 231 33 0 chr2 240306753 240306842 -10381012 + MER20 DNA MER1_type 128 219 0 333 231 33 0 chr2 240306842 240306931 -10380923 + MER20 DNA MER1_type 128 219 0 373 230 10 20 chr2 240306931 240307021 -10380833 + MER20 DNA MER1_type 131 219 0 280 253 33 0 chr2 240307021 240307110 -10380744 + MER20 DNA MER1_type 128 219 0 335 212 30 40 chr2 240307110 240307199 -10380655 + MER20 DNA MER1_type 131 218 -1 324 243 9 36 chr2 240307218 240307329 -10380525 + MER20 DNA MER1_type 112 219 0 * 325 239 22 0 chr2 240307329 240307419 -10380435 + MER20 DNA MER1_type 128 219 0 315 239 34 0 chr2 240307419 240307505 -10380349 + MER20 DNA MER1_type 128 216 -3 367 207 23 0 chr2 240307510 240307597 -10380257 + MER20 DNA MER1_type 131 219 0 333 231 33 0 chr2 240307597 240307686 -10380168 + MER20 DNA MER1_type 128 219 0 317 231 33 0 chr2 240307686 240307775 -10380079 + MER20 DNA MER1_type 128 219 0 347 231 33 0 chr2 240307775 240307864 -10379990 + MER20 DNA MER1_type 128 219 0 329 250 22 0 chr2 240307864 240307954 -10379900 + MER20 DNA MER1_type 128 219 0 297 231 33 0 chr2 240307954 240308043 -10379811 + MER20 DNA MER1_type 128 219 0 355 209 33 0 chr2 240308043 240308132 -10379722 + MER20 DNA MER1_type 128 219 0 337 231 33 0 chr2 240308132 240308221 -10379633 + MER20 DNA MER1_type 128 219 0 345 228 22 0 chr2 240308221 240308311 -10379543 + MER20 DNA MER1_type 128 219 0 2376 102 0 10 chr2 240308496 240308809 -10379045 - AluSg SINE Alu 0 310 1 1716 161 32 7 chr2 240308809 240309093 -10378761 - AluJb SINE Alu -12 300 10 2426 95 0 3 chr2 240309155 240309460 -10378394 - AluSq SINE Alu -9 304 1 292 240 133 0 chr2 240309484 240309559 -10378295 + L2 LINE L2 3229 3313 0 2435 98 0 3 chr2 240309660 240309967 -10377887 - AluSq SINE Alu -7 306 1 1777 154 3 39 chr2 240310608 240310914 -10376940 - AluJb SINE Alu -17 295 1 2251 123 0 0 chr2 240311276 240311584 -10376270 + AluSx SINE Alu 1 308 -4 2333 109 0 0 chr2 240311928 240312231 -10375623 - AluY SINE Alu -8 303 1 1174 67 0 0 chr2 240312231 240312365 -10375489 - AluY SINE Alu -177 134 1 289 270 127 58 chr2 240312406 240312595 -10375259 + L1ME LINE L1 5500 5701 -420 2252 111 26 7 chr2 240312612 240312918 -10374936 - AluSx SINE Alu 0 312 1 201 74 0 0 chr2 240313938 240313965 -10373889 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 255 200 52 0 chr2 240313962 240314077 -10373777 + (TCTCTG)n Simple_repeat Simple_repeat 2 122 0 2409 103 0 0 chr2 240314296 240314598 -10373256 - AluSx SINE Alu -10 302 1 562 249 177 24 chr2 240314842 240315091 -10372763 + L2 LINE L2 3026 3312 -1 231 299 96 62 chr2 240315280 240315792 -10372062 - L1M4 LINE L1 -1480 4666 4138 311 261 52 17 chr2 240315852 240315967 -10371887 + L1M4 LINE L1 2922 3040 -3106 2292 116 0 0 chr2 240317820 240318114 -10369740 + AluSx SINE Alu 1 294 -18 2153 135 0 6 chr2 240318175 240318486 -10369368 - AluJb SINE Alu -3 309 1 1108 224 133 30 chr2 240318532 240318763 -10369091 - MLT1J1 LTR MaLR -4 442 236 276 30 0 0 chr2 240318763 240318796 -10369058 + (CA)n Simple_repeat Simple_repeat 2 34 0 1108 224 133 30 chr2 240318796 240318962 -10368892 - MLT1J1 LTR MaLR -210 236 4 452 248 77 61 chr2 240318962 240319239 -10368615 - MER34C LTR ERV1 0 739 336 306 214 3 0 chr2 240319369 240319443 -10368411 - MER34C LTR ERV1 -467 98 1 2427 94 7 0 chr2 240319640 240319949 -10367905 - AluSq SINE Alu -2 311 1 316 239 22 0 chr2 240320736 240320828 -10367026 + MER20 DNA MER1_type 126 219 0 294 242 33 0 chr2 240320828 240320917 -10366937 + MER20 DNA MER1_type 128 219 0 332 228 22 0 chr2 240320917 240321007 -10366847 + MER20 DNA MER1_type 128 219 0 359 198 33 0 chr2 240321007 240321096 -10366758 + MER20 DNA MER1_type 128 219 0 293 231 33 0 chr2 240321096 240321185 -10366669 + MER20 DNA MER1_type 128 219 0 309 209 44 11 chr2 240321185 240321274 -10366580 + MER20 DNA MER1_type 128 219 0 251 250 33 11 chr2 240321274 240321364 -10366490 + MER20 DNA MER1_type 128 219 0 325 239 22 0 chr2 240321364 240321454 -10366400 + MER20 DNA MER1_type 128 219 0 318 231 33 0 chr2 240321454 240321543 -10366311 + MER20 DNA MER1_type 128 219 0 340 209 33 0 chr2 240321543 240321632 -10366222 + MER20 DNA MER1_type 128 219 0 318 231 33 0 chr2 240321632 240321721 -10366133 + MER20 DNA MER1_type 128 219 0 314 234 9 36 chr2 240321739 240321850 -10366004 + MER20 DNA MER1_type 112 219 0 298 218 18 45 chr2 240321957 240322067 -10365787 + MER20 DNA MER1_type 112 218 -1 318 234 9 36 chr2 240322086 240322197 -10365657 + MER20 DNA MER1_type 112 219 0 294 242 33 0 chr2 240322197 240322286 -10365568 + MER20 DNA MER1_type 128 219 0 310 239 22 0 chr2 240322286 240322376 -10365478 + MER20 DNA MER1_type 128 219 0 359 198 33 0 chr2 240322376 240322465 -10365389 + MER20 DNA MER1_type 128 219 0 293 231 33 0 chr2 240322465 240322554 -10365300 + MER20 DNA MER1_type 128 219 0 293 231 33 0 chr2 240322554 240322643 -10365211 + MER20 DNA MER1_type 128 219 0 309 209 44 11 chr2 240322643 240322732 -10365122 + MER20 DNA MER1_type 128 219 0 246 283 22 0 chr2 240322732 240322822 -10365032 + MER20 DNA MER1_type 128 219 0 325 239 22 0 chr2 240322822 240322912 -10364942 + MER20 DNA MER1_type 128 219 0 318 231 33 0 chr2 240322912 240323001 -10364853 + MER20 DNA MER1_type 128 219 0 340 209 33 0 chr2 240323001 240323090 -10364764 + MER20 DNA MER1_type 128 219 0 311 231 33 0 chr2 240323090 240323179 -10364675 + MER20 DNA MER1_type 128 219 0 343 228 22 0 chr2 240323179 240323269 -10364585 + MER20 DNA MER1_type 128 219 0 289 231 33 0 chr2 240323269 240323358 -10364496 + MER20 DNA MER1_type 128 219 0 290 233 33 0 chr2 240323358 240323446 -10364408 + MER20 DNA MER1_type 128 218 -1 292 241 23 0 chr2 240323449 240323536 -10364318 + MER20 DNA MER1_type 131 219 0 * 331 220 33 0 chr2 240323536 240323625 -10364229 + MER20 DNA MER1_type 128 219 0 313 216 34 0 chr2 240323625 240323711 -10364143 + MER20 DNA MER1_type 128 216 -3 333 218 23 0 chr2 240323716 240323803 -10364051 + MER20 DNA MER1_type 131 219 0 331 220 33 0 chr2 240323803 240323892 -10363962 + MER20 DNA MER1_type 128 219 0 321 239 22 0 chr2 240323892 240323982 -10363872 + MER20 DNA MER1_type 128 219 0 339 209 33 0 chr2 240323982 240324071 -10363783 + MER20 DNA MER1_type 128 219 0 274 253 33 0 chr2 240324071 240324160 -10363694 + MER20 DNA MER1_type 128 219 0 339 228 22 0 chr2 240324160 240324250 -10363604 + MER20 DNA MER1_type 128 219 0 349 220 22 0 chr2 240324250 240324339 -10363515 + MER20 DNA MER1_type 128 218 -1 334 234 9 36 chr2 240324358 240324469 -10363385 + MER20 DNA MER1_type 112 219 0 296 220 44 11 chr2 240324469 240324558 -10363296 + MER20 DNA MER1_type 128 219 0 225 289 33 0 chr2 240324558 240324646 -10363208 + MER20 DNA MER1_type 128 218 -1 311 203 25 0 chr2 240324657 240324736 -10363118 + MER20 DNA MER1_type 139 219 0 305 242 22 0 chr2 240324736 240324825 -10363029 + MER20 DNA MER1_type 128 218 -1 293 243 9 36 chr2 240324844 240324955 -10362899 + MER20 DNA MER1_type 112 219 0 317 218 23 0 chr2 240324957 240325044 -10362810 + MER20 DNA MER1_type 131 219 0 299 222 33 0 chr2 240325044 240325132 -10362722 + MER20 DNA MER1_type 128 218 -1 292 241 23 0 chr2 240325135 240325222 -10362632 + MER20 DNA MER1_type 131 219 0 * 331 220 33 0 chr2 240325222 240325311 -10362543 + MER20 DNA MER1_type 128 219 0 310 216 34 0 chr2 240325311 240325397 -10362457 + MER20 DNA MER1_type 128 216 -3 315 235 35 0 chr2 240325402 240325487 -10362367 + MER20 DNA MER1_type 131 218 -1 363 216 9 36 chr2 240325506 240325617 -10362237 + MER20 DNA MER1_type 112 219 0 264 220 44 11 chr2 240325617 240325706 -10362148 + MER20 DNA MER1_type 128 219 0 281 242 33 0 chr2 240325706 240325795 -10362059 + MER20 DNA MER1_type 128 219 0 350 225 9 36 chr2 240325813 240325924 -10361930 + MER20 DNA MER1_type 112 219 0 * 351 217 22 0 chr2 240325924 240326014 -10361840 + MER20 DNA MER1_type 128 219 0 315 220 33 0 chr2 240326051 240326142 -10361712 + MER20 DNA MER1_type 126 219 0 313 216 34 0 chr2 240326142 240326228 -10361626 + MER20 DNA MER1_type 128 216 -3 333 218 23 0 chr2 240326233 240326320 -10361534 + MER20 DNA MER1_type 131 219 0 319 230 23 0 chr2 240326322 240326409 -10361445 + MER20 DNA MER1_type 131 219 0 * 321 239 22 0 chr2 240326409 240326499 -10361355 + MER20 DNA MER1_type 128 219 0 318 220 33 0 chr2 240326499 240326588 -10361266 + MER20 DNA MER1_type 128 219 0 274 253 33 0 chr2 240326588 240326677 -10361177 + MER20 DNA MER1_type 128 219 0 339 228 22 0 chr2 240326677 240326767 -10361087 + MER20 DNA MER1_type 128 219 0 349 220 22 0 chr2 240326767 240326856 -10360998 + MER20 DNA MER1_type 128 218 -1 305 252 9 36 chr2 240326875 240326986 -10360868 + MER20 DNA MER1_type 112 219 0 299 235 25 0 chr2 240326994 240327075 -10360779 + MER20 DNA MER1_type 137 219 0 225 289 33 0 chr2 240327075 240327163 -10360691 + MER20 DNA MER1_type 128 218 -1 311 203 25 0 chr2 240327174 240327253 -10360601 + MER20 DNA MER1_type 139 219 0 * 318 231 22 0 chr2 240327253 240327342 -10360512 + MER20 DNA MER1_type 128 218 -1 316 234 9 36 chr2 240327361 240327472 -10360382 + MER20 DNA MER1_type 112 219 0 301 227 34 0 chr2 240327472 240327558 -10360296 + MER20 DNA MER1_type 128 216 -3 301 241 23 0 chr2 240327563 240327650 -10360204 + MER20 DNA MER1_type 131 219 0 306 241 23 0 chr2 240327652 240327739 -10360115 + MER20 DNA MER1_type 131 219 0 * 345 228 22 0 chr2 240327739 240327829 -10360025 + MER20 DNA MER1_type 128 219 0 320 239 22 0 chr2 240327829 240327919 -10359935 + MER20 DNA MER1_type 128 219 0 335 211 35 35 chr2 240327933 240328047 -10359807 + MER20 DNA MER1_type 106 219 0 315 231 33 0 chr2 240328047 240328136 -10359718 + MER20 DNA MER1_type 128 219 0 309 231 33 0 chr2 240328136 240328225 -10359629 + MER20 DNA MER1_type 128 219 0 351 230 10 20 chr2 240328225 240328315 -10359539 + MER20 DNA MER1_type 131 219 0 324 220 33 0 chr2 240328315 240328404 -10359450 + MER20 DNA MER1_type 128 219 0 349 220 22 0 chr2 240328404 240328493 -10359361 + MER20 DNA MER1_type 128 218 -1 315 234 9 36 chr2 240328512 240328623 -10359231 + MER20 DNA MER1_type 112 219 0 277 239 34 0 chr2 240328623 240328709 -10359145 + MER20 DNA MER1_type 128 216 -3 327 218 23 0 chr2 240328714 240328801 -10359053 + MER20 DNA MER1_type 131 219 0 318 231 33 0 chr2 240328801 240328890 -10358964 + MER20 DNA MER1_type 128 219 0 338 228 22 0 chr2 240328890 240328980 -10358874 + MER20 DNA MER1_type 128 219 0 339 209 33 0 chr2 240328980 240329069 -10358785 + MER20 DNA MER1_type 128 219 0 289 253 33 0 chr2 240329069 240329158 -10358696 + MER20 DNA MER1_type 128 219 0 339 228 22 0 chr2 240329158 240329248 -10358606 + MER20 DNA MER1_type 128 219 0 278 231 33 0 chr2 240329248 240329337 -10358517 + MER20 DNA MER1_type 128 219 0 290 233 33 0 chr2 240329337 240329425 -10358429 + MER20 DNA MER1_type 128 218 -1 292 241 23 0 chr2 240329428 240329515 -10358339 + MER20 DNA MER1_type 131 219 0 * 331 220 33 0 chr2 240329515 240329604 -10358250 + MER20 DNA MER1_type 128 219 0 318 250 22 0 chr2 240329604 240329694 -10358160 + MER20 DNA MER1_type 128 219 0 299 235 25 0 chr2 240329702 240329783 -10358071 + MER20 DNA MER1_type 137 219 0 225 289 33 0 chr2 240329783 240329871 -10357983 + MER20 DNA MER1_type 128 218 -1 311 203 25 0 chr2 240329882 240329961 -10357893 + MER20 DNA MER1_type 139 219 0 * 354 217 22 0 chr2 240329961 240330051 -10357803 + MER20 DNA MER1_type 128 219 0 300 217 22 22 chr2 240330051 240330140 -10357714 + MER20 DNA MER1_type 131 219 0 317 254 18 18 chr2 240330140 240330230 -10357624 + MER20 DNA MER1_type 130 219 0 311 231 33 0 chr2 240330230 240330319 -10357535 + MER20 DNA MER1_type 128 219 0 340 209 33 0 chr2 240330319 240330408 -10357446 + MER20 DNA MER1_type 128 219 0 342 209 33 0 chr2 240330408 240330497 -10357357 + MER20 DNA MER1_type 128 219 0 326 250 22 0 chr2 240330497 240330587 -10357267 + MER20 DNA MER1_type 128 219 0 289 226 19 38 chr2 240330605 240330711 -10357143 + MER20 DNA MER1_type 112 215 -4 318 203 25 0 chr2 240330725 240330804 -10357050 + MER20 DNA MER1_type 139 219 0 304 242 33 0 chr2 240330804 240330893 -10356961 + MER20 DNA MER1_type 128 219 0 339 228 22 0 chr2 240330893 240330983 -10356871 + MER20 DNA MER1_type 128 219 0 310 231 33 0 chr2 240330983 240331072 -10356782 + MER20 DNA MER1_type 128 219 0 308 222 33 0 chr2 240331072 240331160 -10356694 + MER20 DNA MER1_type 128 218 -1 262 253 23 0 chr2 240331163 240331250 -10356604 + MER20 DNA MER1_type 131 219 0 * 299 242 33 0 chr2 240331250 240331339 -10356515 + MER20 DNA MER1_type 128 219 0 325 228 20 20 chr2 240331366 240331467 -10356387 + MER20 DNA MER1_type 119 219 0 303 250 22 0 chr2 240331467 240331557 -10356297 + MER20 DNA MER1_type 128 219 0 341 227 11 0 chr2 240331598 240331686 -10356168 + MER20 DNA MER1_type 131 219 0 285 242 33 0 chr2 240331686 240331775 -10356079 + MER20 DNA MER1_type 128 219 0 248 253 23 0 chr2 240331777 240331864 -10355990 + MER20 DNA MER1_type 131 219 0 * 316 220 33 0 chr2 240331864 240331953 -10355901 + MER20 DNA MER1_type 128 219 0 303 231 33 0 chr2 240331953 240332042 -10355812 + MER20 DNA MER1_type 128 219 0 329 209 33 0 chr2 240332042 240332131 -10355723 + MER20 DNA MER1_type 128 219 0 307 239 22 0 chr2 240332131 240332221 -10355633 + MER20 DNA MER1_type 128 219 0 334 228 20 20 chr2 240332248 240332349 -10355505 + MER20 DNA MER1_type 119 219 0 * 345 209 33 0 chr2 240332349 240332438 -10355416 + MER20 DNA MER1_type 128 219 0 318 231 33 0 chr2 240332438 240332527 -10355327 + MER20 DNA MER1_type 128 219 0 306 207 27 54 chr2 240332545 240332656 -10355198 + MER20 DNA MER1_type 112 219 0 * 315 231 33 0 chr2 240332656 240332745 -10355109 + MER20 DNA MER1_type 128 219 0 323 226 21 0 chr2 240332831 240332924 -10354930 + MER20 DNA MER1_type 125 219 0 275 242 33 0 chr2 240332924 240333013 -10354841 + MER20 DNA MER1_type 128 219 0 333 239 22 0 chr2 240333013 240333103 -10354751 + MER20 DNA MER1_type 128 219 0 268 253 33 0 chr2 240333103 240333192 -10354662 + MER20 DNA MER1_type 128 219 0 291 250 36 18 chr2 240333192 240333280 -10354574 + MER20 DNA MER1_type 130 219 0 396 196 22 0 chr2 240333280 240333370 -10354484 + MER20 DNA MER1_type 128 219 0 293 242 33 0 chr2 240333370 240333459 -10354395 + MER20 DNA MER1_type 128 219 0 354 216 9 36 chr2 240333477 240333588 -10354266 + MER20 DNA MER1_type 112 219 0 318 236 9 36 chr2 240333695 240333805 -10354049 + MER20 DNA MER1_type 112 218 -1 247 226 21 43 chr2 240333824 240333917 -10353937 + MER20 DNA MER1_type 112 202 -17 1117 85 0 85 chr2 240334021 240334049 -10353805 - AluSq/x SINE Alu -163 150 121 2195 121 0 37 chr2 240334049 240334226 -10353628 - AluSx SINE Alu -2 310 149 2467 64 0 0 chr2 240334226 240334521 -10353333 - AluY SINE Alu -16 295 1 2195 121 0 37 chr2 240334521 240334665 -10353189 - AluSx SINE Alu -163 149 1 1117 85 0 85 chr2 240334665 240334800 -10353054 - AluSq/x SINE Alu -192 121 1 1200 117 15 5 chr2 240334800 240334997 -10352857 + MER6 DNA MER2_type 666 864 -1 1016 207 149 29 chr2 240334998 240335346 -10352508 - MLT1C LTR MaLR -32 435 46 235 269 0 0 chr2 240335367 240335419 -10352435 + MIR SINE MIR 211 262 0 2314 89 17 0 chr2 240335871 240336162 -10351692 - AluSp SINE Alu -17 296 1 2019 110 3 60 chr2 240336179 240336479 -10351375 - AluSx SINE Alu -29 283 1 283 277 32 21 chr2 240336899 240336993 -10350861 + MLT1L LTR MaLR 3 97 -518 598 261 86 20 chr2 240337167 240337412 -10350442 + MLT1L LTR MaLR 348 608 -7 603 212 91 114 chr2 240337418 240337838 -10350016 - MLT1K LTR MaLR -20 568 159 50 52 0 10 chr2 240338663 240338725 -10349129 + AT_rich Low_complexity Low_complexity 1 63 -32 2342 51 3 27 chr2 240338725 240339017 -10348837 + AluY SINE Alu 1 285 -26 50 52 0 10 chr2 240339017 240339050 -10348804 + AT_rich Low_complexity Low_complexity 63 95 0 1917 112 0 0 chr2 240339283 240339541 -10348313 - AluSx SINE Alu -15 297 40 768 235 107 44 chr2 240339547 240339913 -10347941 - L1MC5 LINE L1 -433 7528 7140 1423 199 80 76 chr2 240340086 240340419 -10347435 - L1MC5 LINE L1 -786 7175 6838 2189 129 0 3 chr2 240340419 240340722 -10347132 - AluSx SINE Alu -10 302 1 1423 199 80 76 chr2 240340722 240340915 -10346939 - L1MC5 LINE L1 -1123 6838 6647 2235 102 34 7 chr2 240340969 240341262 -10346592 - AluSx SINE Alu -10 302 2 255 167 0 0 chr2 240341270 240341324 -10346530 + LTR41 LTR ERVL 705 758 -15 480 313 64 53 chr2 240341371 240341737 -10346117 - HAL1b LINE L1 -1104 1320 61 3606 196 40 75 chr2 240341929 240342121 -10345733 + L1M4 LINE L1 4223 4420 -1726 1831 91 0 0 chr2 240342121 240342351 -10345503 + AluSg/x SINE Alu 79 308 -2 3606 196 40 75 chr2 240342351 240343012 -10344842 + L1M4 LINE L1 4420 5028 -1118 2380 94 3 0 chr2 240343012 240343309 -10344545 - AluSx SINE Alu -14 298 1 3606 196 40 75 chr2 240343309 240343609 -10344245 + L1M4 LINE L1 5028 5337 -809 838 153 0 21 chr2 240344079 240344223 -10343631 - AluSg/x SINE Alu 0 310 170 2013 115 11 0 chr2 240344511 240344789 -10343065 + AluSq SINE Alu 1 281 -32 180 0 0 0 chr2 240344789 240344809 -10343045 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 2168 100 0 24 chr2 240345208 240345531 -10342323 + AluSq SINE Alu 1 316 0 313 223 21 0 chr2 240345999 240346093 -10341761 + CT-rich Low_complexity Low_complexity 3 98 0 446 319 75 58 chr2 240346096 240346321 -10341533 - L1MC4a LINE L1 -1716 6092 5857 2545 77 0 0 chr2 240346321 240346632 -10341222 - AluY SINE Alu 0 311 1 446 319 75 58 chr2 240346632 240346754 -10341100 - L1MC4a LINE L1 -1951 5857 5739 259 245 96 68 chr2 240346824 240347073 -10340781 - L1MC4a LINE L1 -2447 5548 5293 2257 125 0 0 chr2 240347093 240347396 -10340458 - AluSx SINE Alu -6 306 4 26 50 0 0 chr2 240347544 240347584 -10340270 + AT_rich Low_complexity Low_complexity 1 40 0 262 275 101 9 chr2 240347615 240347724 -10340130 - L1P LINE L1 -1127 5019 4901 2434 103 3 0 chr2 240347807 240348119 -10339735 - AluSq SINE Alu 0 313 1 1776 147 33 39 chr2 240348121 240348428 -10339426 - AluSx SINE Alu -3 309 5 2462 77 0 6 chr2 240348665 240348977 -10338877 - AluY SINE Alu -1 310 1 346 324 80 23 chr2 240348991 240349429 -10338425 - L1MC4a LINE L1 -2057 4089 3627 2150 118 3 14 chr2 240349431 240349750 -10338104 + AluSq SINE Alu 1 313 0 1886 185 10 16 chr2 240349781 240350165 -10337689 + L1M4 LINE L1 5316 5697 -487 681 163 0 0 chr2 240351369 240351467 -10336387 - AluJ/FLAM SINE Alu -213 99 2 859 270 88 67 chr2 240351467 240351514 -10336340 - L2 LINE L2 -11 3302 3257 2215 95 0 7 chr2 240351514 240351797 -10336057 + AluSx SINE Alu 15 295 -17 859 270 88 67 chr2 240351797 240352123 -10335731 - L2 LINE L2 -56 3257 2921 289 265 13 66 chr2 240352145 240352296 -10335558 - L2 LINE L2 -652 2662 2520 189 0 0 0 chr2 240352490 240352511 -10335343 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1551 122 81 0 chr2 240352514 240352735 -10335119 - AluSx SINE Alu -36 276 38 319 279 91 52 chr2 240352763 240352917 -10334937 - MIR SINE MIR -12 250 91 2233 118 0 0 chr2 240353114 240353410 -10334444 - AluSx SINE Alu -16 296 1 277 349 47 0 chr2 240353679 240353785 -10334069 - L2 LINE L2 -9 3263 3153 250 284 187 8 chr2 240354562 240354696 -10333158 - MIR SINE MIR -70 192 35 1996 180 33 68 chr2 240354832 240354921 -10332933 - L1MB8 LINE L1 0 6178 6087 2608 50 0 0 chr2 240354921 240355219 -10332635 - AluY SINE Alu -13 298 1 2257 116 3 3 chr2 240355219 240355522 -10332332 - AluSx SINE Alu -9 303 1 1996 180 33 68 chr2 240355522 240355768 -10332086 - L1MB8 LINE L1 -90 6088 5835 2355 93 0 3 chr2 240355768 240356070 -10331784 - AluSq SINE Alu -12 301 1 1876 173 3 13 chr2 240356070 240356381 -10331473 - AluJo SINE Alu -3 309 1 1996 180 33 68 chr2 240356381 240356582 -10331272 - L1MB8 LINE L1 -341 5837 5658 2260 109 0 0 chr2 240356733 240357026 -10330828 + AluSq SINE Alu 1 293 -20 181 221 87 87 chr2 240357595 240357699 -10330155 + L2 LINE L2 3139 3242 -30 396 0 0 0 chr2 240357876 240357920 -10329934 + (CA)n Simple_repeat Simple_repeat 2 45 0 361 342 89 43 chr2 240358329 240358633 -10329221 + L1MEc LINE L1 2162 2479 -3917 487 204 0 0 chr2 240358720 240358813 -10329041 + MLT1I LTR MaLR 315 407 -2 375 257 81 97 chr2 240359047 240359417 -10328437 + L1MEc LINE L1 2866 3229 -2986 2099 98 64 7 chr2 240359483 240359778 -10328076 - AluSx SINE Alu 0 312 1 233 290 176 34 chr2 240360932 240361170 -10326684 + LTR33 LTR ERVL 105 376 -145 1761 154 97 0 chr2 240361254 240361533 -10326321 - AluJo SINE Alu -6 306 1 1730 150 17 14 chr2 240363181 240363193 -10324661 - AluJo SINE Alu -18 294 284 207 69 0 0 chr2 240363193 240363222 -10324632 + (TG)n Simple_repeat Simple_repeat 2 30 0 1730 150 17 14 chr2 240363222 240363502 -10324352 - AluJo SINE Alu -28 284 1 2165 103 7 3 chr2 240364332 240364623 -10323231 - AluSx SINE Alu -20 292 1 191 276 52 17 chr2 240364742 240364800 -10323054 - MER5A DNA MER1_type -95 94 35 * 227 178 0 22 chr2 240364756 240364801 -10323053 + MER5A DNA MER1_type 124 167 -22 24 67 0 0 chr2 240365021 240365066 -10322788 + AT_rich Low_complexity Low_complexity 1 45 0 42 48 0 0 chr2 240365193 240365256 -10322598 + AT_rich Low_complexity Low_complexity 1 63 0 186 43 0 0 chr2 240365317 240365340 -10322514 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 214 290 221 0 chr2 240365832 240365962 -10321892 + MIR3 SINE MIR 15 174 -88 2264 83 11 0 chr2 240368587 240368864 -10318990 - AluSc SINE Alu -18 291 12 1877 147 49 0 chr2 240368894 240369180 -10318674 - AluJb SINE Alu -12 300 1 2290 92 17 3 chr2 240369196 240369489 -10318365 - AluSq SINE Alu -16 297 1 663 212 146 0 chr2 240369867 240370032 -10317822 - MER5A DNA MER1_type 0 189 1 2383 84 0 10 chr2 240370091 240370389 -10317465 - AluSx SINE Alu -12 300 6 207 0 0 0 chr2 240371189 240371212 -10316642 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1235 188 58 101 chr2 240371977 240372391 -10315463 + MSTD LTR MaLR 1 396 0 2310 121 0 9 chr2 240372691 240373006 -10314848 + AluSx SINE Alu 1 312 0 1608 243 32 24 chr2 240373191 240373690 -10314164 + MLT1D LTR MaLR 1 503 -2 249 184 0 0 chr2 240373750 240373799 -10314055 - L1MB8 LINE L1 0 6178 6130 1006 171 0 0 chr2 240373800 240373958 -10313896 - FRAM SINE Alu -24 152 1 2062 101 49 7 chr2 240373988 240374274 -10313580 - AluSx SINE Alu -14 298 1 2274 105 7 0 chr2 240375738 240376042 -10311812 - AluSq SINE Alu -7 306 1 1388 117 54 0 chr2 240376042 240376247 -10311607 - AluJb SINE Alu -13 299 84 571 163 7 109 chr2 240376269 240376416 -10311438 + FLAM_C SINE Alu 1 132 -1 441 303 0 0 chr2 240376666 240376788 -10311066 + L2 LINE L2 3192 3313 0 327 295 54 23 chr2 240377148 240377277 -10310577 + MIR SINE MIR 70 202 -60 639 177 113 0 chr2 240377697 240377821 -10310033 - FLAM_C SINE Alu -4 139 2 1710 97 4 4 chr2 240377841 240378069 -10309785 - AluSq SINE Alu -13 300 73 2398 157 111 31 chr2 240378069 240378591 -10309263 + LTR6A LTR ERV1 1 564 0 1289 159 10 0 chr2 240378599 240378800 -10309054 - AluSx SINE Alu -109 203 1 187 274 0 0 chr2 240378831 240378882 -10308972 - MER5B DNA MER1_type -127 51 1 282 241 110 47 chr2 240378883 240379074 -10308780 - L1M4 LINE L1 -2245 3901 3699 1686 185 7 0 chr2 240379082 240379368 -10308486 + AluJo SINE Alu 21 308 -4 2224 122 3 0 chr2 240379375 240379670 -10308184 + AluSq SINE Alu 1 296 -17 2423 123 76 0 chr2 240380669 240381066 -10306788 - MSTA LTR MaLR 0 428 2 2116 136 10 10 chr2 240381724 240382032 -10305822 - AluJb SINE Alu -2 310 3 470 267 69 57 chr2 240382394 240382656 -10305198 - MLT1H LTR MaLR -240 309 45 604 251 84 51 chr2 240382876 240382982 -10304872 - MIR SINE MIR 0 262 161 2334 100 0 0 chr2 240382982 240383282 -10304572 - AluSc SINE Alu -9 300 1 604 251 84 51 chr2 240383282 240383390 -10304464 - MIR SINE MIR -101 161 41 241 326 54 11 chr2 240384141 240384233 -10303621 + MIR SINE MIR 3 98 -164 3604 110 47 27 chr2 240384521 240385123 -10302731 - LTR18B LTR ERVL 0 614 1 2414 100 0 0 chr2 240385294 240385593 -10302261 - AluSx SINE Alu -13 299 1 1433 129 0 0 chr2 240385860 240386053 -10301801 + AluSc SINE Alu 1 193 -116 207 338 60 21 chr2 240388483 240388717 -10299137 - L2 LINE L2 -146 3126 2884 253 231 0 15 chr2 240389628 240389693 -10298161 + MIR SINE MIR 76 139 -69 265 319 115 50 chr2 240391413 240391748 -10296106 + LTR67 LTR ERVL 109 476 -81 1888 98 25 0 chr2 240391748 240391992 -10295862 - AluSx SINE Alu -62 250 1 265 319 115 50 chr2 240391992 240392057 -10295797 + LTR67 LTR ERVL 476 535 -22 188 277 0 15 chr2 240393255 240393320 -10294534 + L2 LINE L2 3191 3254 -18 495 253 18 0 chr2 240395233 240395403 -10292451 + CT-rich Low_complexity Low_complexity 3 175 0 220 222 74 0 chr2 240395730 240395784 -10292070 + L2 LINE L2 3202 3259 -54 30 69 0 0 chr2 240396343 240396401 -10291453 + AT_rich Low_complexity Low_complexity 1 58 0 878 177 44 0 chr2 240396436 240396594 -10291260 - AluSg/x SINE Alu -11 301 137 321 283 91 91 chr2 240396603 240396658 -10291196 - L1 LINE L1 -3315 2831 2777 1307 161 8 8 chr2 240396658 240396894 -10290960 - MER46A DNA MER2_type 0 236 1 321 283 91 91 chr2 240396894 240396925 -10290929 - L1 LINE L1 -3369 2777 2747 1767 147 9 89 chr2 240396925 240397110 -10290744 - AluJb SINE Alu -11 301 152 2253 116 0 7 chr2 240397110 240397412 -10290442 - AluSc SINE Alu -9 300 1 1767 147 9 89 chr2 240397412 240397553 -10290301 - AluJb SINE Alu -160 152 1 321 283 91 91 chr2 240397553 240397652 -10290202 - L1 LINE L1 -3398 2748 2645 386 294 47 79 chr2 240398254 240398468 -10289386 - MLT1K LTR MaLR -381 207 1 339 215 120 70 chr2 240398478 240398636 -10289218 + MLT1K LTR MaLR 187 352 -236 253 254 45 0 chr2 240398697 240398764 -10289090 + MLT1K LTR MaLR 519 588 0 22 0 0 0 chr2 240398787 240398809 -10289045 + AT_rich Low_complexity Low_complexity 1 22 0 302 208 42 0 chr2 240398828 240398900 -10288954 - MIR SINE MIR -159 103 29 25 31 0 0 chr2 240399050 240399082 -10288772 + AT_rich Low_complexity Low_complexity 1 32 0 1502 168 50 64 chr2 240399247 240399544 -10288310 + AluSg SINE Alu 1 293 -17 342 218 8 165 chr2 240399594 240399973 -10287881 - L1ME4a LINE L1 -97 6024 5705 2675 155 20 6 chr2 240401767 240402263 -10285591 - L1MB7 LINE L1 -9 6175 5673 2007 123 17 10 chr2 240402274 240402567 -10285287 - AluSx SINE Alu -5 307 13 838 208 94 38 chr2 240402722 240402934 -10284920 - MIR SINE MIR -17 245 22 2137 108 56 0 chr2 240403784 240404072 -10283782 - AluSx SINE Alu -8 304 1 1021 112 8 0 chr2 240404072 240404206 -10283648 - AluSq/x SINE Alu -178 135 1 180 0 0 0 chr2 240404217 240404237 -10283617 + (T)n Simple_repeat Simple_repeat 1 20 0 2264 120 0 0 chr2 240404364 240404663 -10283191 - AluSx SINE Alu -13 299 1 28 0 0 0 chr2 240404663 240404691 -10283163 + AT_rich Low_complexity Low_complexity 1 28 0 379 301 30 20 chr2 240404784 240404987 -10282867 + L1MB7 LINE L1 4487 4691 -1455 1999 133 0 60 chr2 240405168 240405499 -10282355 + AluSx SINE Alu 1 311 -1 2305 109 0 0 chr2 240406541 240406845 -10281009 + AluSx SINE Alu 1 304 -8 318 184 53 13 chr2 240407114 240407190 -10280664 - MIR SINE MIR -67 195 117 2684 109 34 65 chr2 240407667 240408077 -10279777 - L1MA8 LINE L1 -5 6286 5865 2021 146 3 0 chr2 240408077 240408372 -10279482 - AluJb SINE Alu -16 296 1 2684 109 34 65 chr2 240408372 240408433 -10279421 - L1MA8 LINE L1 -426 5865 5830 2557 63 0 16 chr2 240408433 240408749 -10279105 - AluY SINE Alu 0 311 1 2684 109 34 65 chr2 240408749 240408800 -10279054 - L1MA8 LINE L1 -461 5830 5779 1901 135 54 10 chr2 240408805 240409102 -10278752 - AluSq SINE Alu -3 310 1 337 275 62 52 chr2 240409364 240409557 -10278297 + L1ME LINE L1 5540 5734 -387 365 267 9 0 chr2 240409598 240409703 -10278151 + L1ME LINE L1 5652 5757 -364 4000 168 39 47 chr2 240409857 240411281 -10276573 + L1MB7 LINE L1 4709 6142 -42 1787 167 0 17 chr2 240411281 240411568 -10276286 + AluJb SINE Alu 1 282 -30 221 0 35 0 chr2 240411574 240411603 -10276251 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 4000 168 39 47 chr2 240411603 240411637 -10276217 + L1MB7 LINE L1 6147 6165 -19 237 178 0 0 chr2 240411690 240411735 -10276119 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 24 0 0 0 chr2 240412004 240412028 -10275826 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr2 240412565 240412603 -10275251 + AT_rich Low_complexity Low_complexity 1 38 0 201 315 41 0 chr2 240412944 240413017 -10274837 - MIR3 SINE MIR -37 171 96 321 270 55 37 chr2 240413449 240413612 -10274242 - L1M4 LINE L1 -3871 2275 2110 2223 112 0 10 chr2 240413724 240414028 -10273826 - AluSg SINE Alu -9 301 1 1113 50 31 0 chr2 240414113 240414272 -10273582 + (TTTC)n Simple_repeat Simple_repeat 3 166 0 2135 114 0 0 chr2 240414272 240414552 -10273302 - AluSx SINE Alu -32 280 1 1722 146 3 65 chr2 240415067 240415375 -10272479 - AluJb SINE Alu -23 289 1 1071 184 39 30 chr2 240415442 240415675 -10272179 - MIR SINE MIR -26 236 2 635 124 52 0 chr2 240416107 240416204 -10271650 - AluSg/x SINE Alu -13 299 198 2357 103 0 13 chr2 240416463 240416775 -10271079 + AluSc SINE Alu 1 308 -1 1674 198 16 25 chr2 240417621 240417989 -10269865 + MLT1A1 LTR MaLR 1 365 0 404 89 0 3 chr2 240418304 240418518 -10269336 + AluSc SINE Alu 2 279 -30 2299 101 0 3 chr2 240418761 240419069 -10268785 - AluSx SINE Alu -5 307 1 2138 76 62 3 chr2 240419438 240419729 -10268125 + AluSc SINE Alu 1 308 -1 336 248 54 74 chr2 240470208 240470357 -10217497 + MER61B LTR ERV1 1 146 -279 * 1146 239 96 74 chr2 240470346 240471034 -10216820 + LTR28 LTR ERV1 107 959 -61 3491 209 22 8 chr2 240471158 240472054 -10215800 + L1 LINE L1 4414 5322 -824 1428 139 5 0 chr2 240472058 240472259 -10215595 + AluSq SINE Alu 3 204 -109 3356 206 18 56 chr2 240472362 240473459 -10214395 + L1 LINE L1 2202 3257 -2889 24 32 0 0 chr2 240473667 240473698 -10214156 + AT_rich Low_complexity Low_complexity 1 31 0 46 45 0 0 chr2 240474494 240474561 -10213293 + AT_rich Low_complexity Low_complexity 1 67 0 831 297 70 15 chr2 240474958 240475342 -10212512 + L1M2b LINE L1 227 1077 -6132 2074 224 61 4 chr2 240475575 240476133 -10211721 + L1M2b LINE L1 1737 2326 -4883 362 275 64 47 chr2 240476234 240476405 -10211449 + MLT2C1 LTR ERVL 224 397 0 234 295 12 18 chr2 240476406 240476572 -10211282 + (TA)n Simple_repeat Simple_repeat 2 166 0 341 274 67 6 chr2 240476626 240476790 -10211064 + Charlie7 DNA MER1_type 1739 1912 -700 359 221 55 80 chr2 240479031 240479230 -10208624 + LTR68 LTR ERV1 493 686 -54 189 147 0 0 chr2 240479469 240479503 -10208351 + (TG)n Simple_repeat Simple_repeat 1 34 0 379 282 11 116 chr2 240479503 240479780 -10208074 - MLT1K LTR MaLR -174 414 167 2033 125 14 0 chr2 240480200 240480488 -10207366 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr2 240480488 240480510 -10207344 + AT_rich Low_complexity Low_complexity 1 22 0 671 218 0 0 chr2 240480669 240480811 -10207043 - MLT2B3 LTR ERVL -412 142 1 479 42 0 14 chr2 240480992 240481064 -10206790 - L1PA8 LINE L1 -1 6171 6101 26 50 0 0 chr2 240481201 240481241 -10206613 + AT_rich Low_complexity Low_complexity 1 40 0 198 366 75 8 chr2 240481877 240482011 -10205843 + MIR3 SINE MIR 30 172 -36 284 279 178 8 chr2 240482875 240483004 -10204850 - L2 LINE L2 -12 3301 3151 1816 170 6 16 chr2 240483019 240483330 -10204524 - AluJb SINE Alu -4 308 1 806 246 23 47 chr2 240483876 240484132 -10203722 + MLT1E1 LTR MaLR 405 654 0 302 254 18 45 chr2 240484132 240484242 -10203612 + L1ME3A LINE L1 6037 6143 -27 21 0 0 0 chr2 240485780 240485801 -10202053 + AT_rich Low_complexity Low_complexity 1 21 0 2022 163 0 0 chr2 240485943 240486244 -10201610 + AluJb SINE Alu 1 301 -11 390 218 222 35 chr2 240486260 240486521 -10201333 - L1MC5 LINE L1 -392 7569 7260 792 195 5 41 chr2 240486734 240486929 -10200925 - L1MC5 LINE L1 -728 7233 7046 605 195 9 19 chr2 240486939 240487105 -10200749 - L1MC5 LINE L1 -1059 6983 6738 2167 117 3 3 chr2 240487116 240487414 -10200440 - AluSx SINE Alu -14 298 1 2273 160 0 0 chr2 240487637 240487974 -10199880 + MER1B DNA MER1_type 1 337 0 192 77 0 0 chr2 240488361 240488387 -10199467 + (G)n Simple_repeat Simple_repeat 1 26 0 1194 308 104 60 chr2 240488407 240489343 -10198511 + L2 LINE L2 239 1215 -2099 285 323 8 23 chr2 240489386 240489519 -10198335 + Charlie8 DNA MER1_type 107 237 -2180 953 211 99 7 chr2 240489545 240489788 -10198066 - MIR SINE MIR -12 250 9 1103 332 133 3 chr2 240489869 240490684 -10197170 + L2 LINE L2 2395 3313 0 348 212 93 8 chr2 240491075 240491193 -10196661 + L1M4 LINE L1 3662 3789 -2357 2069 135 7 3 chr2 240491314 240491617 -10196237 - AluSx SINE Alu -8 304 1 417 74 12 25 chr2 240491689 240491770 -10196084 + (TA)n Simple_repeat Simple_repeat 1 80 0 23 0 0 0 chr2 240492092 240492115 -10195739 + AT_rich Low_complexity Low_complexity 1 23 0 2036 127 13 17 chr2 240492125 240492424 -10195430 + AluSx SINE Alu 1 298 -14 519 160 0 0 chr2 240492427 240492502 -10195352 + AluJ/F(R)AM SINE Alu 129 203 -109 2235 123 0 3 chr2 240492650 240492952 -10194902 - AluSg SINE Alu -9 301 1 720 181 21 13 chr2 240492967 240493147 -10194707 + L1M4 LINE L1 5297 5483 -691 264 176 0 0 chr2 240493121 240493172 -10194682 + L1MB5 LINE L1 6110 6160 -14 * 366 344 108 32 chr2 240493205 240493484 -10194370 + L1M4 LINE L1 4672 4971 -1175 2153 101 0 0 chr2 240493493 240493770 -10194084 + AluSc SINE Alu 1 277 -32 189 0 0 0 chr2 240493773 240493794 -10194060 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 227 163 23 0 chr2 240493848 240493891 -10193963 + Alu SINE Alu 37 80 -222 981 259 93 39 chr2 240494315 240494416 -10193438 + L2 LINE L2 2420 2514 -799 325 0 22 22 chr2 240494416 240494462 -10193392 + (CA)n Simple_repeat Simple_repeat 2 47 0 981 259 93 39 chr2 240494462 240495074 -10192780 + L2 LINE L2 2514 3215 -98 221 322 40 34 chr2 240495078 240495255 -10192599 + L2 LINE L2 2328 2505 -809 859 136 8 30 chr2 240495406 240495538 -10192316 + FLAM_C SINE Alu 1 129 -14 1986 124 13 13 chr2 240495698 240495997 -10191857 - AluJb SINE Alu -5 307 9 2192 92 10 3 chr2 240496363 240496658 -10191196 + AluSc SINE Alu 1 297 -12 627 102 10 10 chr2 240496951 240497049 -10190805 - AluSg/x SINE Alu -5 307 210 698 285 60 13 chr2 240497887 240498122 -10189732 - MIR SINE MIR -14 248 3 836 224 132 12 chr2 240498420 240498854 -10189000 - L1ME LINE L1 -584 5578 5076 886 55 31 0 chr2 240499980 240500107 -10187747 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 2240 108 0 0 chr2 240500110 240500398 -10187456 - AluSx SINE Alu -24 288 1 476 302 116 5 chr2 240501180 240501369 -10186485 - L2 LINE L2 0 3313 3104 2525 68 0 13 chr2 240501369 240501680 -10186174 + AluY SINE Alu 1 307 -4 386 347 59 13 chr2 240502064 240502303 -10185551 + L1ME1 LINE L1 5912 6161 -5 200 200 0 0 chr2 240502972 240503007 -10184847 + (CA)n Simple_repeat Simple_repeat 2 36 0 705 225 72 52 chr2 240503349 240503904 -10183950 + L1MC4a LINE L1 6441 7025 -1017 4744 155 93 3 chr2 240505205 240506214 -10181640 + L1 LINE L1 4125 5224 -922 330 159 8 159 chr2 240506228 240506360 -10181494 + L1 LINE L1 5191 5302 -844 3357 125 11 6 chr2 240506361 240506889 -10180965 + L1PA16 LINE L1 5622 6152 -14 2326 98 3 13 chr2 240507144 240507460 -10180394 + AluSp SINE Alu 1 313 0 705 263 76 0 chr2 240508487 240508685 -10179169 + MIR SINE MIR 1 213 -49 529 241 67 114 chr2 240508693 240508936 -10178918 + L1MC4 LINE L1 7555 7769 -273 1959 212 34 55 chr2 240508936 240509502 -10178352 - MLT2B3 LTR ERVL 0 554 1 529 241 67 114 chr2 240509502 240509706 -10178148 + L1MC4 LINE L1 7769 7981 -61 * 2854 161 119 30 chr2 240509704 240510367 -10177487 + L1MD2 LINE L1 5631 6352 -7 2025 131 3 35 chr2 240510367 240510594 -10177260 + AluSx SINE Alu 2 218 -94 2588 26 3 23 chr2 240510594 240510904 -10176950 + AluY SINE Alu 1 304 -7 2025 131 3 35 chr2 240510904 240510990 -10176864 + AluSx SINE Alu 218 305 -7 2235 106 7 0 chr2 240511374 240511677 -10176177 - AluY SINE Alu -6 305 1 1191 115 42 5 chr2 240511677 240511869 -10175985 - MER1B DNA MER1_type -61 236 38 1040 181 15 5 chr2 240511892 240512091 -10175763 + MLT1C LTR MaLR 267 467 0 2225 118 0 0 chr2 240512306 240512602 -10175252 + AluSx SINE Alu 1 296 -16 341 329 144 12 chr2 240512729 240513048 -10174806 + L1ME LINE L1 3365 3725 -2421 1977 153 10 0 chr2 240513060 240513361 -10174493 + AluSx SINE Alu 1 304 -8 238 272 10 29 chr2 240513370 240513473 -10174381 + L1ME LINE L1 3744 3844 -2302 415 321 42 24 chr2 240513669 240513881 -10173973 + L1ME LINE L1 5133 5348 -798 2268 111 3 0 chr2 240513919 240514217 -10173637 + AluSx SINE Alu 1 299 -13 253 301 35 0 chr2 240514217 240514312 -10173542 + L1ME LINE L1 5471 5571 -591 14688 127 83 30 chr2 240514525 240516188 -10171666 + L1M1 LINE L1 820 2692 -4873 2500 64 0 0 chr2 240516188 240516485 -10171369 + AluY SINE Alu 2 298 -13 14688 127 83 30 chr2 240516485 240517589 -10170265 + L1M1 LINE L1 2692 3736 -3829 1605 226 52 39 chr2 240517716 240518233 -10169621 - L1ME LINE L1 -389 5777 5254 6071 237 87 44 chr2 240518249 240518406 -10169448 - L1ME LINE L1 -953 5193 5044 1086 153 75 4 chr2 240518406 240518634 -10169220 - L1MB1 LINE L1 -5 6163 5920 6071 237 87 44 chr2 240518634 240521219 -10166635 - L1ME LINE L1 -1102 5044 2333 316 311 73 52 chr2 240521224 240521472 -10166382 - L2 LINE L2 -1612 1702 1450 1771 158 10 43 chr2 240521593 240521896 -10165958 + AluJb SINE Alu 1 293 -19 225 169 215 0 chr2 240523090 240523155 -10164699 - L1ME3A LINE L1 -5 6165 6087 21 57 0 0 chr2 240523979 240524014 -10163840 + AT_rich Low_complexity Low_complexity 1 35 0 859 173 135 22 chr2 240524072 240524257 -10163597 - MER46A DNA MER2_type 0 236 31 608 243 84 111 chr2 240525036 240525415 -10162439 - MER115 DNA AcHobo -7 686 318 300 236 14 14 chr2 240525512 240525584 -10162270 - MER115 DNA AcHobo -560 133 62 267 148 164 0 chr2 240526349 240526410 -10161444 + MIR3 SINE MIR 124 194 -14 959 270 28 28 chr2 240529855 240530103 -10157751 + MIR SINE MIR 5 252 -10 383 368 8 16 chr2 240530214 240530339 -10157515 - L2 LINE L2 -34 3238 3115 29002 109 16 66 chr2 240530397 240536885 -10150969 - L1PA7 LINE L1 0 6154 9 281 336 73 9 chr2 240538620 240538730 -10149124 - MIR3 SINE MIR -79 129 13 380 343 110 31 chr2 240538822 240539076 -10148778 - L2 LINE L2 -29 3243 2970 311 316 184 33 chr2 240539544 240539756 -10148098 - MIR SINE MIR 0 262 19 243 270 27 0 chr2 240541743 240541817 -10146037 + MIR SINE MIR 187 262 0 872 293 33 27 chr2 240542029 240542360 -10145494 - MLT1I LTR MaLR -75 334 2 697 306 126 44 chr2 240542948 240543740 -10144114 - L2 LINE L2 -446 2868 2012 578 105 0 0 chr2 240543744 240543820 -10144034 - Alu SINE Alu -231 78 3 305 213 25 0 chr2 240543823 240543903 -10143951 - MER105 DNA DNA -117 87 6 1305 182 75 67 chr2 240544271 240544563 -10143291 - MLT1A1 LTR MaLR -1 364 67 2382 82 7 3 chr2 240544563 240544866 -10142988 - AluSx SINE Alu -8 304 1 1305 182 75 67 chr2 240544866 240544931 -10142923 - MLT1A1 LTR MaLR -298 67 4 232 242 350 0 chr2 240545199 240545330 -10142524 + MER5A DNA MER1_type 4 189 0 23 0 0 0 chr2 240545700 240545723 -10142131 + AT_rich Low_complexity Low_complexity 1 23 0 749 158 17 0 chr2 240545723 240545843 -10142011 - FLAM_C SINE Alu -11 122 1 2890 161 25 21 chr2 240546446 240547012 -10140842 - L1MB7 LINE L1 -19 6165 5598 2417 65 3 0 chr2 240547342 240547635 -10140219 + AluY SINE Alu 1 294 -17 393 243 68 24 chr2 240547984 240548190 -10139664 - L1ME LINE L1 -299 5822 5608 940 192 163 18 chr2 240548222 240548498 -10139356 + MSTD LTR MaLR 1 316 -80 186 311 68 15 chr2 240548578 240548710 -10139144 - L3 LINE CR1 -753 824 686 2131 86 23 36 chr2 240549163 240549467 -10138387 - AluSx SINE Alu -12 300 1 369 333 59 78 chr2 240549590 240549947 -10137907 - L2 LINE L2 0 3272 2923 181 294 0 0 chr2 240550148 240550182 -10137672 + L2 LINE L2 3253 3286 -27 2841 10 0 0 chr2 240550422 240550731 -10137123 + AluYa5 SINE Alu 1 309 -2 2198 117 3 3 chr2 240550916 240551215 -10136639 - AluSx SINE Alu -13 299 1 2501 213 84 47 chr2 240552275 240553041 -10134813 - MER21B LTR ERV1 -57 806 13 283 255 163 10 chr2 240553100 240553198 -10134656 - L2 LINE L2 -4 3309 3197 1807 282 63 29 chr2 240553537 240555060 -10132794 + L1ME3A LINE L1 3513 5162 -1008 2079 118 21 0 chr2 240555060 240555378 -10132476 + AluSx SINE Alu 1 312 0 1807 282 63 29 chr2 240555378 240556112 -10131742 + L1ME3A LINE L1 5162 5869 -301 984 238 0 0 chr2 240556227 240556441 -10131413 + MLT1E1 LTR MaLR 3 216 -438 345 181 108 12 chr2 240556967 240557050 -10130804 + LTR67 LTR ERVL 460 550 -7 22 35 0 0 chr2 240557258 240557287 -10130567 + AT_rich Low_complexity Low_complexity 1 29 0 271 286 25 25 chr2 240557407 240557526 -10130328 - LTR67 LTR ERVL -4 553 435 318 50 0 0 chr2 240557785 240557825 -10130029 + (CA)n Simple_repeat Simple_repeat 2 41 0 426 305 66 36 chr2 240557902 240558204 -10129650 + ERVL LTR ERVL 3724 4034 -1730 498 346 52 9 chr2 240558314 240558658 -10129196 + ERVL LTR ERVL 4154 4512 -1142 2513 58 0 0 chr2 240560129 240560424 -10127430 - AluY SINE Alu -16 295 1 256 250 87 25 chr2 240560497 240560700 -10127154 + HAL1b LINE L1 190 608 -740 40785 32 22 1 chr2 240560903 240566931 -10120923 + L1HS LINE L1 1 6155 0 270 143 0 0 chr2 240567355 240567404 -10120450 + (A)n Simple_repeat Simple_repeat 1 49 0 2168 105 11 0 chr2 240567781 240568066 -10119788 + AluSc SINE Alu 1 288 -21 682 142 8 15 chr2 240568066 240568200 -10119654 + G-rich Low_complexity Low_complexity 4 136 0 28 61 0 0 chr2 240568338 240568387 -10119467 + AT_rich Low_complexity Low_complexity 1 49 0 641 148 142 25 chr2 240568582 240568744 -10119110 + L1MC3 LINE L1 7457 7637 -148 352 167 64 0 chr2 240568763 240568855 -10118999 + L1MC3 LINE L1 6239 7781 -4 813 153 0 0 chr2 240568857 240568975 -10118879 + FLAM_C SINE Alu 1 118 -15 34 24 0 0 chr2 240568975 240569016 -10118838 + AT_rich Low_complexity Low_complexity 1 41 0 30 27 0 0 chr2 240569273 240569310 -10118544 + AT_rich Low_complexity Low_complexity 1 37 0 354 266 197 20 chr2 240569557 240569760 -10118094 + MLT1L LTR MaLR 368 606 -9 600 285 5 0 chr2 240570611 240570818 -10117036 + L1MD3 LINE L1 4146 4353 -1793 2044 206 75 26 chr2 240570831 240571652 -10116202 + L1MD3 LINE L1 5160 7995 0 677 253 74 22 chr2 240571648 240571960 -10115894 + L1ME3A LINE L1 5317 5644 -520 * 365 247 81 166 chr2 240572040 240572377 -10115477 + L1ME3A LINE L1 5772 6079 -83 237 262 16 0 chr2 240572494 240572555 -10115299 + L1ME4a LINE L1 5985 6046 -75 216 310 166 27 chr2 240575300 240575487 -10112367 + L3 LINE CR1 1364 1576 -1 180 350 70 20 chr2 240575618 240575718 -10112136 + L2 LINE L2 2358 2462 -852 389 328 49 32 chr2 240576111 240576395 -10111459 + L2 LINE L2 2412 2700 -614 236 301 65 54 chr2 240577086 240577179 -10110675 + L2 LINE L2 3148 3241 -31 27 0 0 0 chr2 240577920 240577947 -10109907 + AT_rich Low_complexity Low_complexity 1 27 0 406 270 22 52 chr2 240581201 240581352 -10106502 - MIR SINE MIR -67 141 15 875 170 14 0 chr2 240582539 240582680 -10105174 + FRAM SINE Alu 1 143 -33 1349 188 34 20 chr2 240582701 240583040 -10104814 + LTR8 LTR ERV1 12 355 -372 729 191 0 0 chr2 240583052 240583183 -10104671 + FLAM_C SINE Alu 1 131 -12 1360 182 46 29 chr2 240583189 240583217 -10104637 + LTR8 LTR ERV1 380 406 -285 277 21 0 62 chr2 240583217 240583265 -10104589 + (CACCC)n Simple_repeat Simple_repeat 3 47 0 1360 182 46 29 chr2 240583265 240583543 -10104311 + LTR8 LTR ERV1 406 691 0 201 311 77 81 chr2 240584102 240584324 -10103530 + L2 LINE L2 2613 2833 -481 27 49 0 0 chr2 240584468 240584509 -10103345 + AT_rich Low_complexity Low_complexity 1 41 0 2000 123 0 4 chr2 240584671 240584948 -10102906 - AluSx SINE Alu -7 305 30 576 278 67 12 chr2 240585310 240585530 -10102324 - MIR SINE MIR -9 253 27 320 195 65 57 chr2 240585910 240585957 -10101897 + LTR67 LTR ERVL 434 557 0 375 197 26 0 chr2 240585957 240586033 -10101821 + MLT1K LTR MaLR 511 588 0 21 57 0 0 chr2 240586349 240586384 -10101470 + AT_rich Low_complexity Low_complexity 1 35 0 409 290 111 25 chr2 240586431 240586593 -10101261 + MIR SINE MIR 29 204 -58 1210 234 103 13 chr2 240587153 240587541 -10100313 + MARNA DNA Mariner 12 434 -152 475 314 118 47 chr2 240587550 240588145 -10099709 + L2 LINE L2 1645 2281 -1033 463 132 22 11 chr2 240588147 240588238 -10099616 + CT-rich Low_complexity Low_complexity 4 95 0 1868 156 0 23 chr2 240588452 240588759 -10099095 - AluJo SINE Alu -12 300 1 188 273 36 0 chr2 240588790 240588845 -10099009 + L2 LINE L2 2992 3048 -224 3620 199 86 50 chr2 240588892 240590415 -10097439 - L1MD2 LINE L1 -3 6356 4802 653 227 35 6 chr2 240590413 240590585 -10097269 - L1MB7 LINE L1 -17 6167 5991 * 1908 110 0 11 chr2 240590656 240590920 -10096934 - AluSx SINE Alu -22 290 30 2067 156 135 4 chr2 240591072 240591721 -10096133 - L1M4 LINE L1 -482 5696 4971 1447 221 68 77 chr2 240591720 240592386 -10095468 - L1M4 LINE L1 -2291 3855 3196 * 866 151 0 0 chr2 240592386 240592512 -10095342 + FLAM_C SINE Alu 1 126 -17 1795 212 25 21 chr2 240592532 240592650 -10095204 - L1M4 LINE L1 -2936 3210 3094 2059 124 0 51 chr2 240592650 240592965 -10094889 - AluSx SINE Alu -13 299 1 1795 212 25 21 chr2 240592965 240593361 -10094493 - L1M4 LINE L1 -3052 3094 2694 1934 149 7 13 chr2 240593843 240594152 -10093702 - AluJo SINE Alu -5 307 1 3635 235 9 52 chr2 240594283 240595233 -10092621 + L1MD3 LINE L1 8 908 -5634 1586 194 92 6 chr2 240595233 240595569 -10092285 - MLT1A1 LTR MaLR 0 365 1 3635 235 9 52 chr2 240595569 240595693 -10092161 + L1MD3 LINE L1 908 1036 -5506 186 167 0 0 chr2 240595712 240595748 -10092106 + (TG)n Simple_repeat Simple_repeat 1 36 0 2138 229 43 15 chr2 240595755 240596472 -10091382 + L1MD3 LINE L1 2797 3533 -3111 452 147 0 13 chr2 240596492 240596567 -10091287 + AluJb SINE Alu 71 144 -168 2000 109 30 20 chr2 240596568 240596689 -10091165 + AluSx SINE Alu 3 121 -191 207 0 0 0 chr2 240596689 240596712 -10091142 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2000 109 30 20 chr2 240596712 240596893 -10090961 + AluSx SINE Alu 121 308 -4 32289 24 0 0 chr2 240596905 240601710 -10086144 + L1HS LINE L1 1352 6155 0 270 143 0 0 chr2 240602134 240602183 -10085671 + (A)n Simple_repeat Simple_repeat 1 49 0 2168 105 11 0 chr2 240602560 240602845 -10085009 + AluSc SINE Alu 1 288 -21 682 142 8 15 chr2 240602845 240602979 -10084875 + G-rich Low_complexity Low_complexity 4 136 0 28 61 0 0 chr2 240603117 240603166 -10084688 + AT_rich Low_complexity Low_complexity 1 49 0 641 148 142 25 chr2 240603361 240603523 -10084331 + L1MC3 LINE L1 7457 7637 -148 352 167 64 0 chr2 240603542 240603634 -10084220 + L1MC3 LINE L1 6239 7781 -4 813 153 0 0 chr2 240603636 240603754 -10084100 + FLAM_C SINE Alu 1 118 -15 34 24 0 0 chr2 240603754 240603795 -10084059 + AT_rich Low_complexity Low_complexity 1 41 0 30 27 0 0 chr2 240604052 240604089 -10083765 + AT_rich Low_complexity Low_complexity 1 37 0 354 266 197 20 chr2 240604336 240604539 -10083315 + MLT1L LTR MaLR 368 606 -9 600 285 5 0 chr2 240605390 240605597 -10082257 + L1MD3 LINE L1 4644 4851 -1793 2044 206 75 26 chr2 240605610 240606431 -10081423 + L1MD3 LINE L1 5658 8493 0 677 253 74 22 chr2 240606427 240606739 -10081115 + L1ME3A LINE L1 5317 5644 -520 * 365 247 81 166 chr2 240606819 240607156 -10080698 + L1ME3A LINE L1 5772 6079 -83 237 262 16 0 chr2 240607273 240607334 -10080520 + L1ME4a LINE L1 5985 6046 -75 207 310 166 27 chr2 240610080 240610267 -10077587 + L3 LINE CR1 1364 1576 -1 382 328 49 32 chr2 240610891 240611175 -10076679 + L2 LINE L2 2412 2700 -614 227 301 65 54 chr2 240611866 240611959 -10075895 + L2 LINE L2 3148 3241 -31 27 0 0 0 chr2 240612700 240612727 -10075127 + AT_rich Low_complexity Low_complexity 1 27 0 1877 138 17 24 chr2 240616066 240616362 -10071492 - AluSx SINE Alu -16 296 3 4412 222 72 32 chr2 240616612 240616909 -10070945 - L1MDb LINE L1 -4992 1417 1133 2277 103 0 10 chr2 240616909 240617209 -10070645 - AluSx SINE Alu -15 297 1 4412 222 72 32 chr2 240617209 240618506 -10069348 - L1MDb LINE L1 -5276 1133 45 900 194 23 42 chr2 240618506 240618722 -10069132 - Cheshire DNA MER1_type -635 1785 1574 458 277 92 0 chr2 240618774 240618915 -10068939 - Charlie8 DNA MER1_type -2155 262 109 225 0 0 0 chr2 240618943 240618968 -10068886 + (T)n Simple_repeat Simple_repeat 1 25 0 2130 103 31 7 chr2 240619330 240619621 -10068233 + AluSg SINE Alu 1 298 -12 21 0 0 0 chr2 240619766 240619787 -10068067 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr2 240620756 240620787 -10067067 + AT_rich Low_complexity Low_complexity 1 31 0 1888 143 34 10 chr2 240622167 240622460 -10065394 + AluJb SINE Alu 11 310 -2 732 312 175 37 chr2 240622521 240622660 -10065194 - L2 LINE L2 0 3313 3195 1806 168 0 17 chr2 240622660 240622957 -10064897 + AluJb SINE Alu 5 296 -16 732 312 175 37 chr2 240622957 240623739 -10064115 - L2 LINE L2 -118 3195 2246 251 364 7 45 chr2 240623916 240624070 -10063784 - L2 LINE L2 -250 3022 2875 1224 251 96 42 chr2 240624145 240624595 -10063259 + MLT1J LTR MaLR 1 474 -37 210 262 82 57 chr2 240625282 240625404 -10062450 - MIR SINE MIR -30 232 108 288 308 103 56 chr2 240625594 240626007 -10061847 - L2 LINE L2 -91 3181 2703 617 263 56 51 chr2 240626085 240626543 -10061311 - L1MEd LINE L1 -4896 1235 822 280 333 12 0 chr2 240626885 240626966 -10060888 - L1MEd LINE L1 -5458 661 580 192 238 0 0 chr2 240627541 240627583 -10060271 - MIR SINE MIR -72 190 149 259 294 55 34 chr2 240627618 240627764 -10060090 - MIR SINE MIR -67 141 6 284 392 32 8 chr2 240627942 240628067 -10059787 + MIR SINE MIR 23 150 -112 183 42 0 0 chr2 240628138 240628162 -10059692 + (TTG)n Simple_repeat Simple_repeat 3 26 0 2380 95 0 3 chr2 240628171 240628477 -10059377 - AluSx SINE Alu -7 305 1 385 217 139 17 chr2 240628577 240628692 -10059162 + MIR SINE MIR 124 252 -10 264 380 47 0 chr2 240628825 240628975 -10058879 - L2 LINE L2 -556 2758 2602 593 277 6 0 chr2 240629131 240629290 -10058564 + MER5A DNA MER1_type 28 187 -2 488 308 146 56 chr2 240629375 240630238 -10057616 - L2 LINE L2 -1018 2296 1356 533 252 17 80 chr2 240630377 240630638 -10057216 - MIR SINE MIR -15 247 3 2101 207 150 11 chr2 240632550 240633071 -10054783 + MLT1E LTR MaLR 1 593 0 225 83 0 0 chr2 240634051 240634087 -10053767 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1744 159 0 25 chr2 240634689 240635024 -10052830 - AluSx SINE Alu 0 333 6 2013 126 105 9 chr2 240635029 240635371 -10052483 - THE1C LTR MaLR 0 375 1 3076 109 39 2 chr2 240635697 240636110 -10051744 + MSTC LTR MaLR 1 428 0 244 396 44 25 chr2 240636320 240636681 -10051173 + L2 LINE L2 2241 2608 -706 4089 99 19 19 chr2 240636701 240637288 -10050566 - LTR8 LTR ERV1 -104 587 1 2828 162 13 6 chr2 240637288 240637758 -10050096 - HUERS-P1 LTR ERV1 0 6263 5791 251 30 0 30 chr2 240638611 240638644 -10049210 - L1P4 LINE L1 -286 5882 5851 203 284 40 27 chr2 240638644 240638718 -10049136 - MIR SINE MIR -79 129 55 310 282 32 24 chr2 240638855 240638979 -10048875 - MLT1K LTR MaLR -16 572 448 599 323 73 52 chr2 240639938 240640378 -10047476 - L2 LINE L2 -4 3268 2820 2039 121 16 38 chr2 240640570 240640884 -10046970 + AluSx SINE Alu 1 307 -5 420 71 0 0 chr2 240641012 240641068 -10046786 + (GGGA)n Simple_repeat Simple_repeat 4 59 0 263 360 27 9 chr2 240645663 240645774 -10042080 + L2 LINE L2 3160 3272 0 1876 138 21 3 chr2 240646015 240646304 -10041550 + AluSx SINE Alu 1 294 -18 2097 120 7 3 chr2 240646316 240646617 -10041237 + AluSp SINE Alu 4 305 -8 291 210 74 12 chr2 240646978 240647059 -10040795 + L2 LINE L2 3186 3271 -1 618 256 70 6 chr2 240647118 240647274 -10040580 - MER96 DNA MER1_type? 0 175 10 223 258 0 15 chr2 240647645 240647711 -10040143 + GA-rich Low_complexity Low_complexity 1 65 0 460 237 63 50 chr2 240647718 240647949 -10039905 + L1M4 LINE L1 97 541 -6314 1785 223 93 96 chr2 240648079 240649064 -10038790 + L1M4 LINE L1 798 1779 -5076 725 273 77 52 chr2 240649092 240649495 -10038359 + LTR52 LTR ERVL 1 413 -8 810 222 174 39 chr2 240649501 240649638 -10038216 + L1 LINE L1 3289 3406 -2740 1434 201 0 67 chr2 240649638 240649951 -10037903 + AluJb SINE Alu 1 292 -20 810 222 174 39 chr2 240649951 240650174 -10037680 + L1 LINE L1 3406 3698 -2448 278 244 38 38 chr2 240650197 240650328 -10037526 - L1M4 LINE L1 -2688 3458 3328 1281 140 0 15 chr2 240650361 240650561 -10037293 + AluJb SINE Alu 35 231 -81 2390 101 3 0 chr2 240651752 240652060 -10035794 - AluSx SINE Alu -3 309 1 1472 274 56 130 chr2 240652249 240653153 -10034701 + L1ME LINE L1 60 1029 -5051 1893 170 0 3 chr2 240653153 240653459 -10034395 + AluJb SINE Alu 1 305 -7 1472 274 56 130 chr2 240653459 240653666 -10034188 + L1ME LINE L1 1029 1250 -4830 1971 142 0 3 chr2 240653666 240653961 -10033893 + AluSx SINE Alu 6 299 -13 1472 274 56 130 chr2 240653961 240654482 -10033372 + L1ME LINE L1 1250 1596 -4484 1164 275 32 6 chr2 240654541 240654857 -10032997 + HAL1 LINE L1 1553 1876 -631 1099 241 19 39 chr2 240655129 240655490 -10032364 + L1MC4a LINE L1 5903 6256 -1552 286 175 50 25 chr2 240655472 240655552 -10032302 + L1 LINE L1 4450 4531 -1615 * 797 204 99 6 chr2 240655875 240656047 -10031807 - MER3 DNA MER1_type -12 197 10 322 326 0 0 chr2 240656309 240656398 -10031456 + MIR3 SINE MIR 72 160 -48 12047 124 23 36 chr2 240656665 240658097 -10029757 - L1PA11 LINE L1 -1 6173 4724 2183 112 23 0 chr2 240658097 240658402 -10029452 - AluSx SINE Alu 0 312 1 12047 124 23 36 chr2 240658402 240659856 -10027998 - L1PA11 LINE L1 -1450 4724 3353 2142 109 3 14 chr2 240659856 240660150 -10027704 - AluSx SINE Alu -21 291 1 12047 124 23 36 chr2 240660150 240661215 -10026639 - L1PA11 LINE L1 -2821 3353 2276 2788 118 65 53 chr2 240662249 240662449 -10025405 + L1MB4 LINE L1 5588 5784 -396 1914 138 3 35 chr2 240662449 240662767 -10025087 + AluJb SINE Alu 1 308 -4 2788 118 65 53 chr2 240662767 240663152 -10024702 + L1MB4 LINE L1 5784 6180 0 236 279 27 45 chr2 240663345 240663456 -10024398 + L2 LINE L2 2225 2333 -981 514 288 140 28 chr2 240663898 240664370 -10023484 + L1M4 LINE L1 3680 4204 -1942 887 303 58 35 chr2 240665010 240665701 -10022153 - L1MC4 LINE L1 -140 7902 7196 232 254 34 17 chr2 240665845 240665904 -10021950 + MER5B DNA MER1_type 30 89 -89 297 184 41 102 chr2 240666015 240666113 -10021741 + MIR SINE MIR 167 258 -4 2027 96 53 4 chr2 240666332 240666613 -10021241 - AluSx SINE Alu -17 295 1 234 0 0 0 chr2 240666736 240666762 -10021092 + (CA)n Simple_repeat Simple_repeat 2 27 0 536 262 90 30 chr2 240666764 240667230 -10020624 + L1M4 LINE L1 2686 3201 -2945 1799 126 45 42 chr2 240667230 240667540 -10020314 + AluSx SINE Alu 1 311 -1 536 262 90 30 chr2 240667540 240667706 -10020148 + L1M4 LINE L1 3201 3356 -2790 3723 148 23 20 chr2 240667913 240668372 -10019482 + L1MA8 LINE L1 4540 4996 -1295 2209 111 7 3 chr2 240668372 240668679 -10019175 + AluSq SINE Alu 1 308 -5 3723 148 23 20 chr2 240668679 240669490 -10018364 + L1MA8 LINE L1 4996 5809 -482 201 39 0 0 chr2 240669493 240669519 -10018335 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 807 163 0 22 chr2 240669526 240669661 -10018193 + FLAM_C SINE Alu 2 133 0 460 146 0 21 chr2 240669684 240669780 -10018074 + (GGAAA)n Simple_repeat Simple_repeat 4 97 0 1582 133 17 23 chr2 240669780 240670081 -10017773 + L1MA8 LINE L1 5814 6112 -179 1024 194 15 0 chr2 240670192 240670393 -10017461 - MER2 DNA MER2_type -136 209 6 1118 103 5 11 chr2 240670396 240670581 -10017273 + L1MA8 LINE L1 6107 6290 -1 4112 208 158 36 chr2 240670607 240671165 -10016689 + L1MC4 LINE L1 6284 6773 -1269 1072 186 67 5 chr2 240671165 240671375 -10016479 + MER58A DNA MER1_type 2 224 0 4112 208 158 36 chr2 240671375 240671919 -10015935 + L1MC4 LINE L1 6773 7249 -793 1466 218 119 3 chr2 240671919 240672272 -10015582 + MSTD LTR MaLR 3 396 0 4112 208 158 36 chr2 240672272 240672733 -10015121 + L1MC4 LINE L1 7249 8039 -3 495 371 88 29 chr2 240673240 240673582 -10014272 - L2 LINE L2 -15 3257 2896 317 263 187 32 chr2 240673613 240673864 -10013990 + L1MC5 LINE L1 7637 7926 -35 469 270 72 7 chr2 240674199 240674351 -10013503 + L2 LINE L2 1857 2018 -1296 907 296 112 30 chr2 240674541 240675113 -10012741 + L1MEd LINE L1 416 1034 -5496 385 254 112 43 chr2 240675162 240675301 -10012553 + L1MEd LINE L1 1115 1278 -5252 1640 176 86 0 chr2 240675301 240675579 -10012275 + AluJb SINE Alu 5 306 -6 385 254 112 43 chr2 240675579 240675671 -10012183 + L1MEd LINE L1 1278 1362 -5168 518 219 186 6 chr2 240675716 240675899 -10011955 + L1MEd LINE L1 2101 2316 -4224 2025 204 42 35 chr2 240675903 240676496 -10011358 + L1M4 LINE L1 4546 5142 -1004 640 293 80 99 chr2 240676854 240676873 -10010981 - L2 LINE L2 -832 2482 2464 1967 109 62 0 chr2 240676873 240677149 -10010705 + AluSx SINE Alu 1 293 -19 640 293 80 99 chr2 240677149 240677867 -10009987 - L2 LINE L2 -850 2464 1759 458 278 37 0 chr2 240678435 240678543 -10009311 + L2 LINE L2 3156 3267 -5 1840 175 10 0 chr2 240678817 240679109 -10008745 + AluJo SINE Alu 1 295 -17 1415 131 0 5 chr2 240679193 240679399 -10008455 + AluJb SINE Alu 14 218 -94 1764 155 13 32 chr2 240680523 240680832 -10007022 - AluJb SINE Alu -9 303 1 335 278 95 8 chr2 240680871 240680997 -10006857 - L1MC5 LINE L1 -26 7935 7799 387 41 0 0 chr2 240680998 240681047 -10006807 + (CA)n Simple_repeat Simple_repeat 2 50 0 12383 168 44 11 chr2 240682193 240682403 -10005451 + L1MEd LINE L1 2736 2937 -3603 2117 141 0 3 chr2 240682403 240682716 -10005138 - AluSx SINE Alu 0 312 1 12383 168 44 11 chr2 240682716 240684915 -10002939 + L1MEd LINE L1 2937 5246 -1294 204 67 0 0 chr2 240684915 240684945 -10002909 + (CATA)n Simple_repeat Simple_repeat 2 31 0 12383 168 44 11 chr2 240684945 240685197 -10002657 + L1MEd LINE L1 5246 5488 -1052 4643 107 16 3 chr2 240685203 240685931 -10001923 + L1MA3 LINE L1 5356 6093 -212 1559 163 14 24 chr2 240686917 240687206 -10000648 + AluJo SINE Alu 1 286 -26 2290 55 3 52 chr2 240688574 240688884 -9998970 - AluY SINE Alu -16 295 1 1242 48 0 7 chr2 240688884 240689030 -9998824 - AluY SINE Alu -166 145 1 2193 78 0 20 chr2 240690168 240690461 -9997393 + AluY SINE Alu 1 287 -24 237 164 82 0 chr2 240690461 240690534 -9997320 - L1MC4 LINE L1 -1350 6692 6614 21 0 0 0 chr2 240690546 240690567 -9997287 + AT_rich Low_complexity Low_complexity 1 21 0 247 256 0 0 chr2 240690752 240690842 -9997012 - L1MC4 LINE L1 -1339 6703 6614 390 287 0 0 chr2 240690842 240690985 -9996869 + (TA)n Simple_repeat Simple_repeat 2 144 0 1421 191 59 22 chr2 240691052 240691353 -9996501 + AluJo SINE Alu 1 311 0 183 220 60 20 chr2 240691679 240691729 -9996125 - L2 LINE L2 -1 3312 3261 536 252 212 53 chr2 240691769 240692090 -9995764 - L2 LINE L2 0 3313 2942 1111 129 49 58 chr2 240692638 240692862 -9994992 + MER46A DNA MER2_type 1 222 -14 2328 117 0 0 chr2 240693354 240693661 -9994193 + AluSx SINE Alu 1 307 -5 2110 90 23 27 chr2 240695031 240695331 -9992523 + AluSc SINE Alu 1 299 -10 399 237 10 17 chr2 240695423 240695540 -9992314 + MIR SINE MIR 50 163 -61 289 291 56 50 chr2 240696146 240696325 -9991529 + L2 LINE L2 2952 3131 -182 384 260 133 29 chr2 240696620 240696793 -9991061 + L3 LINE CR1 1256 1446 -131 832 225 155 27 chr2 240696917 240697331 -9990523 + L1MC4a LINE L1 5836 6302 -1506 1242 257 107 117 chr2 240697473 240697575 -9990279 + L1MC4 LINE L1 6499 6601 -1441 485 127 13 0 chr2 240697575 240697654 -9990200 - MER116 DNA Mariner 0 80 1 1242 257 107 117 chr2 240697654 240698125 -9989729 + L1MC4 LINE L1 6601 7075 -967 2248 85 34 0 chr2 240698125 240698420 -9989434 - AluSx SINE Alu -7 305 1 1242 257 107 117 chr2 240698420 240699317 -9988537 + L1MC4 LINE L1 7075 8042 0 2412 81 0 0 chr2 240699468 240699766 -9988088 + AluSc SINE Alu 6 303 -6 213 39 0 0 chr2 240702554 240702580 -9985274 + (TA)n Simple_repeat Simple_repeat 1 26 0 706 189 0 0 chr2 240702592 240702714 -9985140 - AluSg/x SINE Alu -7 305 184 1232 144 6 0 chr2 240702761 240702942 -9984912 - AluJb SINE Alu -129 183 2 321 155 211 0 chr2 240703548 240703619 -9984235 - MER103 DNA DNA -74 92 7 829 214 108 18 chr2 240703680 240703990 -9983864 - MER58B DNA MER1_type 0 341 1 214 180 197 0 chr2 240704727 240704788 -9983066 - L2 LINE L2 0 3272 3200 202 106 43 21 chr2 240705599 240705646 -9982208 + CT-rich Low_complexity Low_complexity 1 48 0 1995 119 0 0 chr2 240705652 240705920 -9981934 - AluSx SINE Alu -12 300 33 582 239 0 0 chr2 240705927 240706069 -9981785 - L1MD2 LINE L1 -460 5899 5758 1267 223 0 0 chr2 240706087 240706320 -9981534 + AluJo SINE Alu 1 233 -79 471 109 0 0 chr2 240706617 240706681 -9981173 - AluJ/FRAM SINE Alu -31 281 218 255 152 0 0 chr2 240708450 240708496 -9979358 + C-rich Low_complexity Low_complexity 3 48 0 1844 165 0 4 chr2 240708507 240708786 -9979068 - AluJb SINE Alu -33 279 2 25 31 0 0 chr2 240709179 240709211 -9978643 + AT_rich Low_complexity Low_complexity 1 32 0 635 193 73 60 chr2 240709214 240709364 -9978490 - FRAM SINE Alu -24 152 1 361 308 54 18 chr2 240709563 240709769 -9978085 - L1MEc LINE L1 -6138 258 47 310 199 192 62 chr2 240710431 240710577 -9977277 + L1ME4a LINE L1 5955 6119 -2 482 265 88 0 chr2 240711123 240711259 -9976595 - MER117 DNA MER1_type -45 152 5 530 302 0 0 chr2 240711404 240711543 -9976311 + MIR SINE MIR 2 140 -122 6564 25 0 23 chr2 240711555 240711666 -9976188 + L1PA2 LINE L1 5380 5492 -663 2026 123 4 0 chr2 240711666 240711980 -9975874 + AluSc SINE Alu 1 315 0 6564 25 0 23 chr2 240711980 240712654 -9975200 + L1PA2 LINE L1 5492 6148 -7 252 77 0 0 chr2 240712663 240712702 -9975152 + (TTAA)n Simple_repeat Simple_repeat 2 40 0 1107 159 0 6 chr2 240712703 240712879 -9974975 + AluSg/x SINE Alu 129 303 -9 7351 200 55 39 chr2 240712883 240713273 -9974581 + L1MB7 LINE L1 3037 3419 -2765 2224 126 0 3 chr2 240713273 240713575 -9974279 + AluSq SINE Alu 1 301 -12 7351 200 55 39 chr2 240713575 240713728 -9974126 + L1MB7 LINE L1 3419 3568 -2616 897 148 18 41 chr2 240713728 240713897 -9973957 + L1PA15 LINE L1 6000 6164 -1 7351 200 55 39 chr2 240713897 240714336 -9973518 + L1MB7 LINE L1 3568 3998 -2186 1687 168 48 0 chr2 240714336 240714627 -9973227 + AluJo SINE Alu 1 305 -7 7351 200 55 39 chr2 240714627 240714854 -9973000 + L1MB7 LINE L1 3998 4220 -1964 2372 105 0 0 chr2 240714854 240715160 -9972694 - AluSx SINE Alu -6 306 1 7351 200 55 39 chr2 240715160 240715932 -9971922 + L1MB7 LINE L1 4220 4978 -1206 1870 138 34 7 chr2 240715932 240716230 -9971624 + AluSq SINE Alu 1 306 -7 7351 200 55 39 chr2 240716230 240717313 -9970541 + L1MB7 LINE L1 4978 6166 -18 188 328 62 0 chr2 240720039 240720103 -9967751 + L2 LINE L2 3169 3236 -36 204 189 14 54 chr2 240720103 240720177 -9967677 + (TA)n Simple_repeat Simple_repeat 2 72 0 338 244 130 38 chr2 240720423 240720554 -9967300 + L2 LINE L2 3171 3313 0 1018 252 100 45 chr2 240720687 240721136 -9966718 + Charlie7 DNA MER1_type 82 555 -2057 * 1968 225 92 35 chr2 240721116 240721393 -9966461 + Charlie7 DNA MER1_type 1671 1931 -681 2344 92 7 0 chr2 240721393 240721696 -9966158 - AluSx SINE Alu -7 305 1 1968 225 92 35 chr2 240721696 240722237 -9965617 + Charlie7 DNA MER1_type 1931 2535 -77 1910 143 35 0 chr2 240722438 240722725 -9965129 - AluSx SINE Alu -15 297 1 2107 94 35 3 chr2 240722733 240723021 -9964833 - AluSc SINE Alu -12 297 1 905 200 122 0 chr2 240723186 240723345 -9964509 - AluJo SINE Alu -11 301 116 414 0 0 0 chr2 240723345 240723391 -9964463 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 905 200 122 0 chr2 240723391 240723411 -9964443 - AluJo SINE Alu -196 116 100 1839 159 3 14 chr2 240723636 240723926 -9963928 + AluJo SINE Alu 1 287 -25 473 247 52 127 chr2 240724022 240724391 -9963463 - L1ME4a LINE L1 -110 6011 5671 232 275 99 11 chr2 240724543 240724634 -9963220 - MIR3 SINE MIR -29 179 81 1759 188 43 6 chr2 240725371 240725695 -9962159 - MER58B DNA MER1_type 0 341 6 329 235 39 0 chr2 240726446 240726548 -9961306 - L1ME4a LINE L1 -2 6119 6014 2638 213 55 105 chr2 240727293 240727393 -9960461 + L1M4 LINE L1 2814 2917 -3229 2202 113 7 0 chr2 240727393 240727684 -9960170 + AluSc SINE Alu 1 293 -16 2002 165 0 0 chr2 240727693 240727990 -9959864 + AluSx SINE Alu 1 297 -15 2638 213 55 105 chr2 240727990 240728248 -9959606 + L1M4 LINE L1 2925 3194 -2952 2185 93 0 4 chr2 240728248 240728555 -9959299 + AluSc SINE Alu 1 306 0 2638 213 55 105 chr2 240728555 240728603 -9959251 + L1M4 LINE L1 3194 3243 -2903 1709 139 79 4 chr2 240728603 240728870 -9958984 - AluJb SINE Alu -25 287 1 2638 213 55 105 chr2 240728870 240729658 -9958196 + L1M4 LINE L1 3243 3961 -2185 234 0 0 0 chr2 240729783 240729809 -9958045 + (T)n Simple_repeat Simple_repeat 1 26 0 548 315 28 24 chr2 240730426 240730639 -9957215 - L3 LINE CR1 -139 1438 1225 648 144 36 0 chr2 240731091 240731202 -9956652 + L1MB7 LINE L1 5998 6112 -72 184 254 48 16 chr2 240732223 240732286 -9955568 + L2 LINE L2 1771 1835 -1479 290 276 123 0 chr2 240732540 240732743 -9955111 + L2 LINE L2 2920 3147 -166 354 45 0 0 chr2 240732943 240732987 -9954867 + (TCCCC)n Simple_repeat Simple_repeat 4 47 0 2194 93 0 0 chr2 240732991 240733269 -9954585 - AluSg SINE Alu -32 278 1 3880 167 46 100 chr2 240733442 240734378 -9953476 - MER21A LTR ERV1 -26 905 21 648 117 0 11 chr2 240734595 240734689 -9953165 + AluJ/FLAM SINE Alu 2 94 -218 1327 215 54 0 chr2 240736126 240736241 -9951613 + AluJo SINE Alu 9 116 -196 378 0 0 0 chr2 240736241 240736283 -9951571 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1327 215 54 0 chr2 240736283 240736427 -9951427 + AluJo SINE Alu 116 282 -30 197 65 32 0 chr2 240736456 240736487 -9951367 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2164 116 3 3 chr2 240736547 240736850 -9951004 + AluSg SINE Alu 1 303 -7 2279 102 7 3 chr2 240736941 240737244 -9950610 + AluSx SINE Alu 1 304 -8 2299 101 10 0 chr2 240737644 240737942 -9949912 + AluSq SINE Alu 1 301 -12 2291 116 0 0 chr2 240738063 240738364 -9949490 - AluSx SINE Alu -11 301 1 2143 114 14 0 chr2 240738599 240738888 -9948966 - AluSx SINE Alu -19 293 1 513 283 33 11 chr2 240739397 240739581 -9948273 + MIR3 SINE MIR 18 205 -3 416 221 124 28 chr2 240739755 240739900 -9947954 + MIR SINE MIR 104 262 0 1787 150 4 15 chr2 240739932 240740206 -9947648 + AluJb SINE Alu 5 275 -37 2532 252 50 24 chr2 240740288 240740682 -9947172 + L1ME3A LINE L1 4810 5192 -978 1998 162 3 0 chr2 240740682 240740985 -9946869 + AluSx SINE Alu 5 308 -4 2532 252 50 24 chr2 240740985 240741856 -9945998 + L1ME3A LINE L1 5192 6165 -5 2102 167 41 14 chr2 240741883 240742325 -9945529 + L1MB8 LINE L1 5725 6178 0 763 250 23 0 chr2 240742420 240742596 -9945258 + MIR SINE MIR 7 186 -76 1964 141 9 31 chr2 240742811 240743130 -9944724 + AluJo SINE Alu 1 312 0 343 263 144 8 chr2 240743474 240743592 -9944262 + MIR SINE MIR 87 220 -42 2231 101 7 0 chr2 240744089 240744387 -9943467 - AluSp SINE Alu -13 300 1 284 304 51 25 chr2 240745305 240745463 -9942391 - L1MC5 LINE L1 -30 7931 7770 655 259 162 34 chr2 240746850 240747385 -9940469 + L2 LINE L2 2717 3311 -2 228 242 44 55 chr2 240747416 240747507 -9940347 + L3 LINE CR1 1176 1265 -312 309 388 8 39 chr2 240747574 240747829 -9940025 + L3 LINE CR1 1282 1528 -49 242 330 27 0 chr2 240748029 240748141 -9939713 - L2 LINE L2 -188 3084 2970 236 304 98 0 chr2 240748182 240748274 -9939580 + MER20B DNA MER1_type 73 173 -610 318 338 112 40 chr2 240748297 240749236 -9938618 - L2 LINE L2 -432 2882 1877 1860 186 12 24 chr2 240749283 240749621 -9938233 - MLT1A1 LTR MaLR 0 365 32 277 289 50 33 chr2 240750252 240750373 -9937481 + MIR SINE MIR 20 142 -120 2094 94 7 7 chr2 240750460 240750752 -9937102 - AluSx SINE Alu 0 313 22 275 347 85 28 chr2 240750969 240751145 -9936709 + L3 LINE CR1 1363 1548 -29 25 0 0 0 chr2 240751342 240751367 -9936487 + AT_rich Low_complexity Low_complexity 1 25 0 479 262 160 22 chr2 240752526 240752751 -9935103 - MLT1K LTR MaLR -64 524 269 2181 134 7 0 chr2 240752866 240753171 -9934683 - AluSx SINE Alu -5 307 1 195 186 0 0 chr2 240753247 240753290 -9934564 + (TATG)n Simple_repeat Simple_repeat 2 44 0 624 228 35 35 chr2 240753547 240753744 -9934110 - L2 LINE L2 0 3313 3117 453 207 181 0 chr2 240754999 240755115 -9932739 + MER58A DNA MER1_type 1 137 0 236 155 35 35 chr2 240755338 240755396 -9932458 + MIR3 SINE MIR 129 186 -22 230 300 18 64 chr2 240755435 240755545 -9932309 - L2 LINE L2 0 3272 3168 255 347 18 36 chr2 240760512 240760679 -9927175 - L2 LINE L2 -887 2427 2264 248 267 44 33 chr2 240760814 240760904 -9926950 - L2 LINE L2 -1890 1424 1334 26 50 0 0 chr2 240761747 240761787 -9926067 + AT_rich Low_complexity Low_complexity 1 40 0 322 389 41 14 chr2 240762318 240762539 -9925315 - L2 LINE L2 -173 3099 2873 215 397 52 15 chr2 240762663 240762799 -9925055 - MIR3 SINE MIR -64 144 4 970 225 51 4 chr2 240763003 240763239 -9924615 - L1MD3 LINE L1 -1 7994 7748 594 200 117 14 chr2 240763525 240763670 -9924184 - MLT1A2 LTR MaLR 0 374 215 297 305 45 19 chr2 240766172 240766326 -9921528 + L1ME4a LINE L1 5735 5892 -229 4743 230 98 80 chr2 240766342 240768103 -9919751 + HAL1 LINE L1 4 1796 -711 284 143 0 0 chr2 240768115 240768157 -9919697 - MER58 DNA MER1_type -3 2417 2376 2165 119 0 3 chr2 240768212 240768522 -9919332 + AluSq SINE Alu 2 310 -3 727 186 180 0 chr2 240768532 240768704 -9919150 - Charlie1 DNA MER1_type -307 2454 2252 1632 147 4 0 chr2 240768704 240768955 -9918899 + AluJb SINE Alu 1 252 -60 357 155 238 24 chr2 240768955 240769039 -9918815 + FLAM_C SINE Alu 32 133 0 1171 225 146 0 chr2 240769073 240769530 -9918324 - Charlie1 DNA MER1_type -916 1845 5 845 218 184 51 chr2 240769536 240770008 -9917846 + HAL1 LINE L1 1969 2503 -4 454 284 96 16 chr2 240770080 240770330 -9917524 - L1MC5 LINE L1 -181 7780 7511 332 266 46 9 chr2 240770477 240770586 -9917268 + L1ME4a LINE L1 5965 6077 -44 888 277 74 34 chr2 240771899 240772249 -9915605 + L2 LINE L2 2430 2793 -521 279 108 30 0 chr2 240772819 240772869 -9914985 + FRAM/FAM SINE Alu 33 67 -99 201 74 0 0 chr2 240772891 240772918 -9914936 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 1778 100 0 0 chr2 240772921 240773152 -9914702 + AluSq SINE Alu 1 231 -82 278 267 158 8 chr2 240774003 240774123 -9913731 + MIR SINE MIR 48 185 -77 2202 81 0 50 chr2 240774388 240774711 -9913143 + AluSg SINE Alu 1 307 -3 1643 174 0 40 chr2 240775696 240776017 -9911837 - AluSx SINE Alu -4 308 1 1044 227 41 0 chr2 240777869 240778089 -9909765 + MIR SINE MIR 14 242 -20 326 256 113 8 chr2 240778413 240778546 -9909308 - L1ME4a LINE L1 -3 6118 5972 1069 198 53 10 chr2 240778546 240778753 -9909101 + MER20 DNA MER1_type 1 216 -3 345 229 55 64 chr2 240779101 240779210 -9908644 + L2 LINE L2 3199 3306 -7 2110 141 24 12 chr2 240780062 240780395 -9907459 - MER1B DNA MER1_type 0 337 1 304 330 79 13 chr2 240781286 240781513 -9906341 + L2 LINE L2 2035 2276 -1038 259 361 19 9 chr2 240782335 240782443 -9905411 - MIR3 SINE MIR -7 201 93 1622 190 65 3 chr2 240784512 240784833 -9903021 - MER58B DNA MER1_type 0 341 1 186 283 33 0 chr2 240786000 240786060 -9901794 - L2 LINE L2 -700 2614 2553 1625 220 83 43 chr2 240786301 240786864 -9900990 - L1ME4a LINE L1 -11 6110 5525 772 45 0 18 chr2 240786935 240787046 -9900808 + (TC)n Simple_repeat Simple_repeat 1 109 0 21 71 0 0 chr2 240787696 240787738 -9900116 + AT_rich Low_complexity Low_complexity 1 42 0 305 333 41 8 chr2 240789320 240789443 -9898411 + L2 LINE L2 3100 3226 -46 244 214 0 18 chr2 240840653 240840709 -9847145 + G-rich Low_complexity Low_complexity 4 58 0 1378 77 0 6 chr2 240841650 240841831 -9846023 + AluSq SINE Alu 117 296 -17 213 380 70 31 chr2 240844365 240844594 -9843260 - L3b LINE CR1 -190 1393 1156 222 261 46 0 chr2 240844903 240844968 -9842886 + L2 LINE L2 3198 3265 -7 1986 125 0 0 chr2 240845061 240845342 -9842512 - AluSx SINE Alu -31 281 1 255 270 184 58 chr2 240845426 240845600 -9842254 - MIR SINE MIR -1 261 66 359 323 177 6 chr2 240846000 240846158 -9841696 - L2 LINE L2 -1 3271 3087 427 225 20 76 chr2 240849981 240850186 -9837668 - MLT1K LTR MaLR -343 245 84 322 300 244 0 chr2 240850601 240850761 -9837093 + MIR SINE MIR 58 256 -6 425 351 109 43 chr2 240850788 240851576 -9836278 + L2 LINE L2 961 1800 -1514 743 302 136 48 chr2 240854858 240855813 -9832041 + HAL1 LINE L1 31 1069 -1438 504 324 72 29 chr2 240856128 240856434 -9831420 + HAL1 LINE L1 1957 2275 -232 382 272 118 3 chr2 240856453 240856660 -9831194 + MLT1H LTR MaLR 96 333 -262 780 121 32 8 chr2 240856774 240856898 -9830956 - AluSq/x SINE Alu -186 127 1 947 177 0 0 chr2 240856898 240857062 -9830792 + LTR45B LTR ERV1 24 187 -302 23230 35 23 1 chr2 240857065 240861651 -9826203 + L1P LINE L1 1 4720 -1426 1418 177 72 35 chr2 240861862 240862264 -9825590 - pTR5 LTR ERV1 -1279 1159 743 1547 171 3 39 chr2 240863989 240864299 -9823555 + AluJo SINE Alu 2 300 -12 2257 131 120 5 chr2 240865869 240866251 -9821603 - MSTA LTR MaLR 0 428 3 2282 144 75 42 chr2 240866274 240866943 -9820911 - MER51A LTR ERV1 -9 625 1 401 250 0 33 chr2 240867015 240867135 -9820719 - LTR45B LTR ERV1 -100 389 274 4488 18 0 4 chr2 240867162 240867668 -9820186 - L1PA3 LINE L1 0 6155 5652 1252 137 0 0 chr2 240867787 240867977 -9819877 + AluSg/x SINE Alu 117 306 -6 1469 116 28 0 chr2 240868023 240868276 -9819578 - AluSx SINE Alu 0 320 62 310 345 26 0 chr2 240868618 240868734 -9819120 - MIR SINE MIR -37 225 107 345 274 0 0 chr2 240868752 240868869 -9818985 + (TG)n Simple_repeat Simple_repeat 2 118 0 1487 153 63 20 chr2 240868889 240869189 -9818665 - MER65A LTR ERV1 -132 313 1 765 292 43 79 chr2 240873992 240874351 -9813503 + L1ME3A LINE L1 5609 5979 -191 2107 116 13 10 chr2 240874351 240874662 -9813192 + AluSx SINE Alu 1 312 0 765 292 43 79 chr2 240874662 240874685 -9813169 + L1ME3A LINE L1 5979 6001 -169 945 134 0 8 chr2 240874685 240874819 -9813035 + FLAM_C SINE Alu 1 133 0 765 292 43 79 chr2 240874819 240875018 -9812836 + L1ME3A LINE L1 6001 6170 0 1084 260 116 15 chr2 240875130 240875227 -9812627 - MER113 DNA MER1_type? -6 515 429 1351 179 151 0 chr2 240875227 240875479 -9812375 - AluJo SINE Alu -12 290 1 1084 260 116 15 chr2 240875479 240875846 -9812008 - MER113 DNA MER1_type? -92 429 4 242 313 101 0 chr2 240875882 240875981 -9811873 + MIR SINE MIR 48 156 -106 271 222 78 65 chr2 240875983 240876136 -9811718 - MER65A LTR ERV1 0 445 291 282 29 0 0 chr2 240876152 240876187 -9811667 + (TGG)n Simple_repeat Simple_repeat 1 35 0 1006 110 58 0 chr2 240876187 240876335 -9811519 - AluSq SINE Alu -22 291 135 367 190 33 91 chr2 240876548 240876669 -9811185 - MER65B LTR ERV1 -417 114 1 22 0 0 0 chr2 240877738 240877760 -9810094 + AT_rich Low_complexity Low_complexity 1 22 0 303 290 145 25 chr2 240879727 240879927 -9807927 + L2 LINE L2 1808 2031 -1283 539 347 57 11 chr2 240880013 240880278 -9807576 + L2 LINE L2 2240 2516 -798 295 267 195 17 chr2 240880295 240880452 -9807402 + MIR SINE MIR 42 237 -25 2685 95 19 6 chr2 240880452 240880811 -9807043 + THE1B LTR MaLR 1 364 0 295 267 195 17 chr2 240880811 240880834 -9807020 + MIR SINE MIR 237 255 -7 193 333 72 22 chr2 240881108 240881246 -9806608 + L2 LINE L2 2557 2701 -613 634 285 150 29 chr2 240881605 240881713 -9806141 - L1ME4a LINE L1 -17 6104 6011 1959 125 24 3 chr2 240881713 240882010 -9805844 - AluSx SINE Alu -9 303 1 634 285 150 29 chr2 240882010 240882353 -9805501 - L1ME4a LINE L1 -110 6011 5598 22 0 0 0 chr2 240882696 240882718 -9805136 + AT_rich Low_complexity Low_complexity 1 22 0 718 279 181 55 chr2 240882976 240883848 -9804006 + L2 LINE L2 2320 3312 -1 1896 153 7 3 chr2 240884666 240884967 -9802887 - AluJo SINE Alu -10 302 1 568 277 54 27 chr2 240885081 240885265 -9802589 - MIR SINE MIR -17 245 57 849 163 0 15 chr2 240885857 240885992 -9801862 - FLAM_C SINE Alu 0 133 1 2066 45 0 0 chr2 240886167 240886413 -9801441 + L1PA5 LINE L1 5909 6154 0 2088 126 10 0 chr2 240886564 240886873 -9800981 - AluSq SINE Alu -1 312 1 25 31 0 0 chr2 240886922 240886954 -9800900 + AT_rich Low_complexity Low_complexity 1 32 0 193 297 121 11 chr2 240888338 240888429 -9799425 - L2 LINE L2 -8 3264 3164 353 362 24 0 chr2 240888726 240888853 -9799001 - L1MEd LINE L1 -4883 1501 1372 515 312 91 72 chr2 240888860 240889081 -9798773 - L1MEd LINE L1 -4925 1447 1232 2096 123 0 7 chr2 240889081 240889391 -9798463 - AluSx SINE Alu -4 308 1 515 312 91 72 chr2 240889391 240889686 -9798168 - L1MEd LINE L1 -5140 1232 944 2124 120 0 0 chr2 240889686 240889986 -9797868 + AluSx SINE Alu 1 300 -12 515 312 91 72 chr2 240889986 240890639 -9797215 - L1MEd LINE L1 -5428 944 254 298 339 65 8 chr2 240890656 240890780 -9797074 - L2 LINE L2 -2 3311 3181 294 280 88 8 chr2 240891148 240891273 -9796581 + L2 LINE L2 3159 3293 -20 425 207 54 0 chr2 240892931 240893042 -9794812 - LTR16B LTR ERVL 0 464 348 377 365 24 6 chr2 240893134 240893301 -9794553 - HERV16 LTR ERVL -4818 178 9 1051 263 89 80 chr2 240893308 240893525 -9794329 - LTR16B LTR ERVL 0 464 250 595 213 24 8 chr2 240893525 240893652 -9794202 - FLAM_A SINE Alu -1 132 4 1051 263 89 80 chr2 240893652 240893894 -9793960 - LTR16B LTR ERVL -214 250 1 191 267 83 0 chr2 240894641 240894701 -9793153 - MIR SINE MIR -57 151 87 370 235 130 9 chr2 240895345 240895460 -9792394 - L1ME3A LINE L1 -5 6165 6037 539 169 0 11 chr2 240895560 240895649 -9792205 + FLAM_C SINE Alu 18 105 -38 22 0 0 0 chr2 240895657 240895679 -9792175 + AT_rich Low_complexity Low_complexity 1 22 0 838 214 76 9 chr2 240895679 240895903 -9791951 - L1ME3A LINE L1 -114 6056 5818 449 200 110 35 chr2 240895905 240896050 -9791804 - L1ME3A LINE L1 -398 5772 5617 1980 263 101 45 chr2 240896078 240897288 -9790566 - L1ME3A LINE L1 -760 5386 4052 2431 113 19 25 chr2 240897790 240898154 -9789700 - THE1B LTR MaLR 0 364 3 180 143 0 0 chr2 240906535 240906563 -9781291 + L2 LINE L2 3254 3281 -32 293 355 74 26 chr2 240906923 240907112 -9780742 - MIR SINE MIR -19 243 46 380 184 0 9 chr2 240912179 240912293 -9775561 + CT-rich Low_complexity Low_complexity 1 113 0 200 227 45 15 chr2 240912641 240912707 -9775147 + (GTATG)n Simple_repeat Simple_repeat 5 72 0 348 171 0 0 chr2 240913000 240913082 -9774772 + CT-rich Low_complexity Low_complexity 1 82 0 1603 158 3 58 chr2 240919568 240919898 -9767956 - AluJb SINE Alu 0 312 1 2247 77 0 7 chr2 240919957 240920271 -9767583 - AluY SINE Alu 0 312 1 348 182 33 91 chr2 240921278 240921399 -9766455 + MER65A LTR ERV1 1 114 -331 21 0 0 0 chr2 240921444 240921465 -9766389 + AT_rich Low_complexity Low_complexity 1 21 0 974 119 107 0 chr2 240921620 240921779 -9766075 + AluY SINE Alu 134 309 -2 281 222 90 60 chr2 240921783 240921950 -9765904 + MER65A LTR ERV1 274 445 0 258 317 99 0 chr2 240921952 240922053 -9765801 - MIR SINE MIR -106 156 46 515 259 54 11 chr2 240922087 240922272 -9765582 + MER113 DNA MER1_type? 4 196 -325 564 230 33 7 chr2 240922558 240922710 -9765144 + L1MD2 LINE L1 6050 6205 -154 828 193 0 0 chr2 240922747 240922887 -9764967 - AluSg/x SINE Alu -7 305 166 1052 150 0 0 chr2 240922938 240923098 -9764756 - AluJb SINE Alu -145 167 8 2260 112 0 0 chr2 240923112 240923416 -9764438 - AluY SINE Alu -7 304 1 244 130 0 0 chr2 240923416 240923462 -9764392 + L1MD2 LINE L1 6292 6337 -22 2596 208 36 0 chr2 240923933 240924086 -9763768 - L1MB2 LINE L1 -1 6170 6024 231 114 0 0 chr2 240924086 240924121 -9763733 + (CCCTAA)n Simple_repeat Simple_repeat 5 39 0 2596 208 36 0 chr2 240924121 240924497 -9763357 - L1MB2 LINE L1 -147 6024 5622 245 197 16 0 chr2 240927447 240927508 -9760346 + CT-rich Low_complexity Low_complexity 3 64 0 1391 179 0 12 chr2 240927515 240927767 -9760087 - AluSx SINE Alu 0 312 64 28 0 0 0 chr2 240927776 240927804 -9760050 + AT_rich Low_complexity Low_complexity 1 28 0 533 115 13 0 chr2 240927804 240927882 -9759972 - AluSx SINE Alu -231 82 4 1581 207 19 74 chr2 240927885 240927981 -9759873 + LTR49-int LTR ERV1 2006 2106 -2765 2215 113 0 0 chr2 240927981 240928283 -9759571 - AluSx SINE Alu -10 302 1 1581 207 19 74 chr2 240928283 240928626 -9759228 + LTR49-int LTR ERV1 2106 2415 -2456 2118 117 7 0 chr2 240928626 240928925 -9758929 - AluSx SINE Alu -11 301 1 1581 207 19 74 chr2 240928925 240929000 -9758854 + LTR49-int LTR ERV1 2415 2493 -2378 2376 80 0 0 chr2 240929047 240929348 -9758506 - AluY SINE Alu 0 311 11 749 193 20 15 chr2 240929401 240929603 -9758251 + LTR49-int LTR ERV1 1541 1743 -6377 26 30 0 0 chr2 240929651 240929684 -9758170 + AT_rich Low_complexity Low_complexity 1 33 0 659 185 79 23 chr2 240929684 240929695 -9758159 + LTR49-int LTR ERV1 1781 1790 -3090 558 224 103 0 chr2 240929695 240929802 -9758052 - FLAM_C SINE Alu -15 118 1 659 185 79 23 chr2 240929802 240930070 -9757784 + LTR49-int LTR ERV1 1790 4313 -567 623 93 0 0 chr2 240930076 240930162 -9757692 + AluSg/x SINE Alu 219 304 -6 329 161 12 12 chr2 240930171 240930252 -9757602 - LTR57-int LTR ERVL -4271 1072 992 * 459 180 144 20 chr2 240930243 240930260 -9757594 - LOR1-int LTR ERV1 -3477 1646 1632 192 77 0 0 chr2 240930260 240930286 -9757568 + (TATATG)n Simple_repeat Simple_repeat 3 28 0 459 180 144 20 chr2 240930286 240930422 -9757432 - LOR1-int LTR ERV1 -3491 1632 1099 412 216 17 9 chr2 240930436 240930552 -9757302 + LTR49-int LTR ERV1 2368 2484 -2639 2126 112 10 0 chr2 240930677 240930980 -9756874 - AluSx SINE Alu -6 306 1 302 146 0 0 chr2 240931059 240931114 -9756740 - Alu SINE Alu -1 301 247 664 148 80 28 chr2 240931114 240931350 -9756504 + LTR49-int LTR ERV1 3637 3957 -979 271 62 146 0 chr2 240931376 240931424 -9756430 + LTR49-int LTR ERV1 5338 5392 -939 335 45 0 0 chr2 240931459 240931503 -9756351 - AluY SINE Alu -259 44 1 1978 76 0 8 chr2 240931533 240931796 -9756058 + AluSq SINE Alu 37 297 -16 489 279 14 44 chr2 240931948 240932151 -9755703 + MIR SINE MIR 45 243 -19 339 275 0 0 chr2 240932167 240932287 -9755567 + (CA)n Simple_repeat Simple_repeat 1 120 0 414 292 26 0 chr2 240932341 240932454 -9755400 + MIR SINE MIR 107 222 -40 221 268 49 49 chr2 240935052 240935175 -9752679 + MIR3 SINE MIR 3 125 -83 1980 117 4 0 chr2 240935900 240936174 -9751680 - AluSx SINE Alu -13 299 25 2255 100 0 7 chr2 240936466 240936775 -9751079 - AluSq SINE Alu -6 307 1 31 0 0 0 chr2 240936990 240937021 -9750833 + AT_rich Low_complexity Low_complexity 1 31 0 253 314 74 63 chr2 240938024 240938155 -9749699 - MIR SINE MIR -34 228 93 1662 152 23 30 chr2 240938155 240938458 -9749396 + AluJb SINE Alu 1 301 -11 253 314 74 63 chr2 240938458 240938501 -9749353 - MIR SINE MIR -169 93 52 180 111 0 0 chr2 240941272 240941299 -9746555 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 1603 158 3 58 chr2 240950978 240951308 -9736546 - AluJb SINE Alu 0 312 1 2228 81 0 7 chr2 240951367 240951686 -9736168 - AluY SINE Alu 0 317 1 348 182 33 91 chr2 240952693 240952814 -9735040 + MER65B LTR ERV1 1 114 -417 21 0 0 0 chr2 240952859 240952880 -9734974 + AT_rich Low_complexity Low_complexity 1 21 0 974 119 107 0 chr2 240953035 240953194 -9734660 + AluY SINE Alu 134 309 -2 281 222 90 60 chr2 240953198 240953365 -9734489 + MER65A LTR ERV1 274 445 0 258 317 99 0 chr2 240953367 240953468 -9734386 - MIR SINE MIR -106 156 46 515 259 54 11 chr2 240953502 240953687 -9734167 + MER113 DNA MER1_type? 4 196 -325 564 230 33 7 chr2 240953973 240954125 -9733729 + L1MD2 LINE L1 6050 6205 -154 828 193 0 0 chr2 240954162 240954302 -9733552 - AluSg/x SINE Alu -7 303 164 1052 150 0 0 chr2 240954353 240954513 -9733341 - AluJb SINE Alu -145 167 8 2097 131 0 3 chr2 240954527 240954832 -9733022 - AluY SINE Alu -7 304 1 244 130 0 0 chr2 240954832 240954878 -9732976 + L1MD2 LINE L1 6292 6337 -22 2584 209 36 0 chr2 240955349 240955502 -9732352 - L1MB2 LINE L1 -1 6170 6024 231 114 0 0 chr2 240955502 240955537 -9732317 + (CCCTAA)n Simple_repeat Simple_repeat 5 39 0 2584 209 36 0 chr2 240955537 240955913 -9731941 - L1MB2 LINE L1 -147 6024 5622 344 339 57 0 chr2 240958819 240958943 -9728911 + MIR SINE MIR 112 242 -20 194 287 193 54 chr2 240960283 240960656 -9727198 - L2 LINE L2 -54 3259 2835 277 305 68 38 chr2 240960928 240961164 -9726690 - Charlie7 DNA MER1_type -155 2457 2215 354 235 0 0 chr2 240961178 240961259 -9726595 + FAM SINE Alu 94 174 -1 588 236 55 48 chr2 240961300 240961609 -9726245 - Charlie7 DNA MER1_type -658 1954 1644 903 138 23 0 chr2 240961628 240961758 -9726096 + AluSq/x SINE Alu 3 135 -177 2144 113 7 0 chr2 240961758 240962049 -9725805 + AluSx SINE Alu 1 293 -19 612 245 43 0 chr2 240962049 240962212 -9725642 + L1PA16 LINE L1 5994 6163 -3 2334 100 0 0 chr2 240962305 240962605 -9725249 + AluY SINE Alu 1 300 -11 3540 252 62 42 chr2 240962645 240963862 -9723992 - Charlie7 DNA MER1_type -1018 1594 348 2124 105 34 7 chr2 240963862 240964157 -9723697 + AluSp SINE Alu 1 303 -10 3540 252 62 42 chr2 240964157 240964222 -9723632 - Charlie7 DNA MER1_type -2264 348 286 1388 184 109 4 chr2 240965771 240966094 -9721760 - AluJb SINE Alu 0 350 1 2755 140 22 19 chr2 240966101 240966267 -9721587 - L1MA6 LINE L1 0 6300 6136 2367 114 0 0 chr2 240966267 240966574 -9721280 + AluSp SINE Alu 1 307 -6 2755 140 22 19 chr2 240966574 240967005 -9720849 - L1MA6 LINE L1 -164 6136 5708 696 196 0 36 chr2 240967005 240967143 -9720711 - FLAM_C SINE Alu 0 133 1 2755 140 22 19 chr2 240967143 240967867 -9719987 - L1MA6 LINE L1 -592 5708 4881 1467 175 15 38 chr2 240967871 240968134 -9719720 + AluJo SINE Alu 1 257 -55 8494 214 44 27 chr2 240968134 240968572 -9719282 - L1M4 LINE L1 -1744 4988 4559 1936 78 16 4 chr2 240968572 240968849 -9719005 - AluY SINE Alu 0 314 35 8494 214 44 27 chr2 240968849 240969005 -9718849 - L1M4 LINE L1 -2173 4559 4407 2108 143 17 0 chr2 240969005 240969306 -9718548 - AluSx SINE Alu -6 306 1 8494 214 44 27 chr2 240969306 240970105 -9717749 - L1M4 LINE L1 -2325 4407 3623 1991 158 3 7 chr2 240970105 240970408 -9717446 + AluJo SINE Alu 1 302 -10 8494 214 44 27 chr2 240970408 240970636 -9717218 - L1M4 LINE L1 -3109 3623 3400 1571 164 112 4 chr2 240970636 240970904 -9716950 - AluJb SINE Alu -15 297 1 8494 214 44 27 chr2 240970904 240971211 -9716643 - L1M4 LINE L1 -3332 3400 3100 492 241 0 9 chr2 240971211 240971319 -9716535 - FLAM_C SINE Alu -19 124 18 8494 214 44 27 chr2 240971319 240971463 -9716391 - L1M4 LINE L1 -3632 3100 2960 2124 122 0 0 chr2 240971463 240971742 -9716112 + AluSx SINE Alu 1 279 -33 414 0 0 0 chr2 240971742 240971788 -9716066 + (CA)n Simple_repeat Simple_repeat 1 46 0 8494 214 44 27 chr2 240971788 240974838 -9713016 - L1M4 LINE L1 -3771 2961 2 184 324 90 9 chr2 240975290 240975401 -9712453 + L3 LINE CR1 1165 1284 -293 181 364 64 0 chr2 240975471 240975581 -9712273 + L3 LINE CR1 1386 1502 -75 2324 96 7 3 chr2 240975917 240976220 -9711634 + AluSq SINE Alu 1 304 -9 1821 169 7 3 chr2 240977643 240977951 -9709903 - AluJb SINE Alu -3 309 1 187 138 0 0 chr2 240983707 240983736 -9704118 + L2 LINE L2 3268 3296 -17 219 188 0 0 chr2 240986080 240986128 -9701726 + C-rich Low_complexity Low_complexity 4 51 0 21 57 0 0 chr2 240986478 240986513 -9701341 + GC_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr2 240986725 240986753 -9701101 + GC_rich Low_complexity Low_complexity 1 28 0 27 49 0 0 chr2 240986899 240986940 -9700914 + GC_rich Low_complexity Low_complexity 1 41 0 242 250 0 0 chr2 240988001 240988053 -9699801 + (CGG)n Simple_repeat Simple_repeat 3 54 0 39 84 0 0 chr2 240988188 240988283 -9699571 + GC_rich Low_complexity Low_complexity 1 95 0 219 188 0 0 chr2 240989178 240989226 -9698628 + C-rich Low_complexity Low_complexity 4 51 0 24 0 0 0 chr2 240989988 240990012 -9697842 + GC_rich Low_complexity Low_complexity 1 24 0 2134 95 32 3 chr2 240990656 240990941 -9696913 - AluSq SINE Alu -20 293 1 291 268 51 66 chr2 240993514 240993707 -9694147 - MIR SINE MIR -61 147 1 2248 92 0 20 chr2 240995114 240995440 -9692414 + AluY SINE Alu 2 311 0 2220 120 0 0 chr2 240995491 240995791 -9692063 - AluSg SINE Alu -10 300 1 2506 89 0 0 chr2 240995947 240996251 -9691603 - AluSx SINE Alu -8 304 1 2334 57 4 4 chr2 240996854 240997160 -9690694 + AluY SINE Alu 1 306 0 561 165 0 0 chr2 240998226 240998317 -9689537 - FRAM SINE Alu -65 111 21 2255 93 6 35 chr2 240998978 240999290 -9688564 - AluSq SINE Alu -10 303 1 1800 161 7 11 chr2 240999367 240999653 -9688201 - AluJb SINE Alu -27 285 1 197 164 151 55 chr2 240999718 240999791 -9688063 - MIR3 SINE MIR -3 205 126 780 168 0 0 chr2 241000305 241000430 -9687424 - FLAM_C SINE Alu -8 125 1 180 156 44 22 chr2 241000649 241000694 -9687160 - L2 LINE L2 -4 3309 3264 627 151 122 0 chr2 241000829 241000968 -9686886 - L1M4 LINE L1 -849 5297 5142 853 150 0 0 chr2 241000968 241001088 -9686766 - FLAM_C SINE Alu -23 120 1 1255 179 15 4 chr2 241001092 241001354 -9686500 - L1M4 LINE L1 -1014 5132 4868 699 146 140 73 chr2 241001354 241001518 -9686336 - MER21B LTR ERV1 -368 495 321 956 194 12 0 chr2 241001585 241001755 -9686099 - AluJ SINE Alu -24 288 117 907 130 22 29 chr2 241001775 241001913 -9685941 - AluJ SINE Alu -171 141 5 297 320 66 0 chr2 241001918 241002040 -9685814 + MIR SINE MIR 78 207 -55 34 0 0 0 chr2 241002115 241002149 -9685705 + AT_rich Low_complexity Low_complexity 1 34 0 1317 0 13 0 chr2 241002355 241002511 -9685343 - L1PA2 LINE L1 0 6155 5998 191 100 0 25 chr2 241002958 241002998 -9684856 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2249 118 3 10 chr2 241003003 241003317 -9684537 + AluSx SINE Alu 1 312 0 670 269 6 12 chr2 241004024 241004191 -9683663 + MIR SINE MIR 97 262 0 210 267 58 58 chr2 241004220 241004306 -9683548 + L2 LINE L2 3187 3272 0 2336 107 0 0 chr2 241004323 241004621 -9683233 - AluSc SINE Alu -11 298 1 273 232 88 112 chr2 241005913 241006038 -9681816 + L2 LINE L2 3133 3254 -18 289 282 0 78 chr2 241007334 241007437 -9680417 + L2 LINE L2 2999 3093 -179 292 329 48 68 chr2 241008353 241008605 -9679249 + L3 LINE CR1 914 1160 -417 265 231 77 63 chr2 241008959 241009064 -9678790 + MIR SINE MIR 81 190 -72 1833 136 14 7 chr2 241009064 241009350 -9678504 + AluJb SINE Alu 1 288 -24 265 231 77 63 chr2 241009350 241009387 -9678467 + MIR SINE MIR 190 225 -37 252 307 0 13 chr2 241009978 241010053 -9677801 - MIR SINE MIR -95 113 40 352 217 31 0 chr2 241010350 241010440 -9677414 - MIR SINE MIR -62 146 104 22 56 0 0 chr2 241010745 241010781 -9677073 + GC_rich Low_complexity Low_complexity 1 36 0 16706 72 12 2 chr2 241011290 241013662 -9674192 + Tigger1 DNA MER2_type 24 2417 -1 240 270 32 63 chr2 241013776 241013902 -9673952 - MIR3 SINE MIR -84 124 3 1834 137 3 55 chr2 241014114 241014443 -9673411 - AluJb SINE Alu 0 312 1 263 227 27 13 chr2 241014443 241014518 -9673336 - MIR SINE MIR -98 164 89 1627 190 37 3 chr2 241014931 241015226 -9672628 + AluJb SINE Alu 1 305 -7 180 0 0 0 chr2 241015239 241015259 -9672595 + (A)n Simple_repeat Simple_repeat 1 20 0 2125 99 0 66 chr2 241016219 241016553 -9671301 - AluSx SINE Alu 0 312 1 545 271 24 18 chr2 241017357 241017527 -9670327 - MER5A DNA MER1_type -4 185 15 509 263 117 6 chr2 241017512 241017683 -9670171 + MIR SINE MIR 16 205 -57 * 255 79 0 0 chr2 241020440 241020478 -9667376 + (TAA)n Simple_repeat Simple_repeat 1 38 0 190 395 67 0 chr2 241020485 241020604 -9667250 - MIR SINE MIR -13 249 123 189 89 67 0 chr2 241021914 241021959 -9665895 + (CAGCC)n Simple_repeat Simple_repeat 4 51 0 189 0 0 0 chr2 241022300 241022321 -9665533 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1166 113 52 117 chr2 241022324 241022555 -9665299 - AluSx SINE Alu -57 255 40 232 154 10 199 chr2 241022627 241022828 -9665026 + C-rich Low_complexity Low_complexity 4 166 0 2163 112 0 0 chr2 241023395 241023698 -9664156 - AluSq SINE Alu -10 303 1 433 300 53 22 chr2 241023775 241024002 -9663852 + MLT1L LTR MaLR 359 592 -23 247 280 28 47 chr2 241024760 241024867 -9662987 - MIR SINE MIR -73 189 85 1840 184 95 51 chr2 241024867 241025373 -9662481 - MLT1F LTR MaLR -14 528 1 424 130 152 0 chr2 241025456 241025548 -9662306 + MER53 DNA DNA 1 106 -83 204 297 188 23 chr2 241026778 241026906 -9660948 - MER91B DNA MER1_type 0 190 42 206 262 0 143 chr2 241027085 241027211 -9660643 - MER91B DNA MER1_type -82 108 1 2148 104 10 0 chr2 241027667 241027965 -9659889 - AluSc SINE Alu -8 301 1 2183 104 3 0 chr2 241028245 241028543 -9659311 + AluSx SINE Alu 1 299 -13 889 285 50 18 chr2 241028666 241029063 -9658791 - L1ME3 LINE L1 -23 6139 5730 2283 93 0 22 chr2 241029064 241029377 -9658477 - AluSq SINE Alu -5 308 3 965 185 12 0 chr2 241029390 241029552 -9658302 - FRAM SINE Alu -2 164 1 1949 139 13 7 chr2 241029588 241029898 -9657956 - AluJb SINE Alu 0 312 1 719 191 0 0 chr2 241030339 241030470 -9657384 + MIR SINE MIR 15 145 -117 220 324 135 0 chr2 241031065 241031176 -9656678 - L2 LINE L2 0 3272 3147 252 310 6 13 chr2 241032398 241032556 -9655298 + (TG)n Simple_repeat Simple_repeat 1 157 0 379 328 32 0 chr2 241033445 241033570 -9654284 + MER91B DNA MER1_type 1 129 -61 2333 82 0 0 chr2 241033808 241034102 -9653752 - AluY SINE Alu -17 294 1 216 0 0 0 chr2 241034230 241034254 -9653600 + (TC)n Simple_repeat Simple_repeat 2 25 0 1977 116 14 24 chr2 241034254 241034548 -9653306 - AluSx SINE Alu -21 291 1 242 249 15 38 chr2 241036930 241037041 -9650813 - MIR SINE MIR -58 150 43 212 255 0 0 chr2 241038232 241038283 -9649571 - MIR SINE MIR -113 149 99 21 36 0 0 chr2 241039506 241039534 -9648320 + GC_rich Low_complexity Low_complexity 1 28 0 282 239 56 0 chr2 241042035 241042106 -9645748 - MER63 DNA MER1_type -358 704 4 2107 135 3 3 chr2 241043034 241043346 -9644508 - AluJb SINE Alu 0 312 1 250 263 79 0 chr2 241043738 241043814 -9644040 + L2 LINE L2 3213 3294 -19 2260 95 10 0 chr2 241043831 241044136 -9643718 + AluSx SINE Alu 1 308 -4 1213 140 0 72 chr2 241045091 241045327 -9642527 + AluJb SINE Alu 87 305 -7 269 272 105 53 chr2 241045521 241045548 -9642306 + MIR SINE MIR 81 105 -157 1870 229 70 9 chr2 241045548 241045988 -9641866 + MLT1C LTR MaLR 1 467 0 269 272 105 53 chr2 241045988 241046074 -9641780 + MIR SINE MIR 105 200 -62 844 181 0 0 chr2 241046435 241046568 -9641286 - FLAM_C SINE Alu 0 133 1 329 364 40 17 chr2 241046829 241047002 -9640852 - L1M4 LINE L1 -2940 3206 3030 307 279 72 57 chr2 241047056 241047084 -9640770 + HAL1b LINE L1 954 980 -368 2028 109 3 33 chr2 241047084 241047386 -9640468 - AluSq SINE Alu -20 293 1 307 279 72 57 chr2 241047386 241047744 -9640110 + HAL1b LINE L1 980 1346 -2 526 330 32 11 chr2 241047889 241048074 -9639780 - MIR SINE MIR -61 201 13 264 200 0 0 chr2 241048719 241048779 -9639075 + (CA)n Simple_repeat Simple_repeat 1 60 0 477 348 0 0 chr2 241050210 241050371 -9637483 + MIR SINE MIR 73 233 -29 232 303 45 0 chr2 241050438 241050504 -9637350 - L2 LINE L2 -87 3185 3117 2058 77 95 3 chr2 241050513 241050798 -9637056 + AluY SINE Alu 1 311 0 419 277 80 137 chr2 241050944 241051073 -9636781 + L1MC4a LINE L1 5462 5597 -2211 1574 176 4 14 chr2 241051073 241051352 -9636502 - AluJo SINE Alu -2 310 35 419 277 80 137 chr2 241051352 241051558 -9636296 + L1MC4a LINE L1 5597 5778 -2030 1222 169 27 102 chr2 241051563 241051723 -9636131 + AluJo SINE Alu 1 131 -181 2135 127 0 0 chr2 241051723 241052030 -9635824 + AluSx SINE Alu 1 307 -5 1222 169 27 102 chr2 241052030 241052164 -9635690 + AluJo SINE Alu 131 273 -39 320 163 122 61 chr2 241052164 241052311 -9635543 + L1MC4a LINE L1 5793 5948 -1860 250 270 30 10 chr2 241053582 241053682 -9634172 - MER45A DNA AcHobo -51 127 26 211 324 69 39 chr2 241054030 241054132 -9633722 - MIR SINE MIR -70 192 88 292 380 18 45 chr2 241054276 241054500 -9633354 - MIR SINE MIR -14 248 31 235 272 0 98 chr2 241055044 241055228 -9632626 + CT-rich Low_complexity Low_complexity 6 171 0 2005 124 7 0 chr2 241055848 241056162 -9631692 + AluSx SINE Alu 1 316 0 618 176 96 8 chr2 241056199 241056324 -9631530 - MIR SINE MIR -55 207 72 338 238 148 0 chr2 241056324 241056425 -9631429 - MIR SINE MIR -29 233 118 514 192 13 96 chr2 241056901 241057057 -9630797 + MIR SINE MIR 9 151 -111 318 264 152 39 chr2 241057440 241057618 -9630236 - MIR SINE MIR -46 216 19 28 29 0 0 chr2 241058358 241058393 -9629461 + GC_rich Low_complexity Low_complexity 1 35 0 245 270 9 43 chr2 241058576 241058691 -9629163 + C-rich Low_complexity Low_complexity 3 113 0 218 308 22 11 chr2 241058721 241058812 -9629042 + (CACG)n Simple_repeat Simple_repeat 3 94 0 243 210 0 32 chr2 241059257 241059319 -9628535 + C-rich Low_complexity Low_complexity 1 60 0 799 268 55 4 chr2 241059801 241060036 -9627818 + MIR SINE MIR 15 261 -1 245 250 0 0 chr2 241060360 241060412 -9627442 + (TG)n Simple_repeat Simple_repeat 1 52 0 520 272 53 30 chr2 241060420 241060589 -9627265 - MIR SINE MIR -25 237 65 538 290 129 5 chr2 241060964 241061157 -9626697 - MIR SINE MIR -38 224 8 226 303 92 0 chr2 241061226 241061302 -9626552 - L2 LINE L2 0 3313 3231 1072 254 59 25 chr2 241061896 241062251 -9625603 + MLT1A2 LTR MaLR 1 367 -7 571 314 27 21 chr2 241062645 241062833 -9625021 + MIR SINE MIR 4 192 -70 264 100 0 0 chr2 241062899 241062939 -9624915 + (ATG)n Simple_repeat Simple_repeat 1 40 0 189 303 78 78 chr2 241063514 241063656 -9624198 + MIR SINE MIR 29 170 -92 2290 88 3 0 chr2 241065120 241065425 -9622429 + AluSq SINE Alu 1 306 -7 203 207 146 37 chr2 241065595 241065677 -9622177 - MIR SINE MIR -86 122 32 * 632 238 62 6 chr2 241065670 241065830 -9622024 + MIR SINE MIR 59 227 -35 1038 133 51 44 chr2 241065886 241066101 -9621753 + MLT1E3 LTR MaLR 1 203 -421 878 146 0 7 chr2 241066101 241066238 -9621616 + FLAM_C SINE Alu 2 137 -6 1206 204 142 11 chr2 241066273 241066625 -9621229 + MLT1E3 LTR MaLR 225 622 -2 423 338 38 33 chr2 241068106 241068319 -9619535 + MIR SINE MIR 29 242 -20 233 185 0 46 chr2 241068958 241069023 -9618831 + GA-rich Low_complexity Low_complexity 1 62 0 1440 199 30 3 chr2 241069214 241069516 -9618338 + AluJo SINE Alu 1 310 -2 424 289 48 16 chr2 241070103 241070360 -9617494 - L2 LINE L2 -234 3038 2784 25 65 0 0 chr2 241073667 241073713 -9614141 + GC_rich Low_complexity Low_complexity 1 46 0 1767 173 0 26 chr2 241074275 241074588 -9613266 - AluJb SINE Alu -7 305 1 800 177 0 0 chr2 241074598 241074722 -9613132 - FLAM_A SINE Alu -9 124 1 4348 210 73 101 chr2 241074722 241076020 -9611834 - MER65A-int LTR ERV1 -2957 1914 581 1695 147 0 99 chr2 241076020 241076354 -9611500 - AluJo SINE Alu -1 301 1 180 0 0 0 chr2 241076364 241076384 -9611470 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 4348 210 73 101 chr2 241076384 241076721 -9611133 - MER65A-int LTR ERV1 -4299 572 227 1766 141 11 0 chr2 241076721 241076997 -9610857 + AluSx SINE Alu 1 279 -33 4348 210 73 101 chr2 241076997 241077189 -9610665 - MER65A-int LTR ERV1 -4644 227 131 6958 90 15 19 chr2 241077189 241078162 -9609692 - LTR5 LTR ERVK 0 969 1 4348 210 73 101 chr2 241078162 241078280 -9609574 - MER65A-int LTR ERV1 -4740 131 11 1944 192 22 0 chr2 241078296 241078713 -9609141 - MER65A LTR ERV1 -11 434 9 2073 133 50 14 chr2 241078982 241079344 -9608510 - THE1C LTR MaLR 0 375 1 21 36 0 0 chr2 241081579 241081607 -9606247 + GC_rich Low_complexity Low_complexity 1 28 0 187 326 0 0 chr2 241084564 241084610 -9603244 - L2 LINE L2 0 3272 3227 3499 261 84 73 chr2 241086179 241086385 -9601469 + Charlie7 DNA MER1_type 133 335 -2277 2364 66 0 31 chr2 241086385 241086702 -9601152 - AluY SINE Alu -4 307 1 3499 261 84 73 chr2 241086702 241087052 -9600802 + Charlie7 DNA MER1_type 335 679 -1933 2109 115 3 3 chr2 241087052 241087348 -9600506 - AluSx SINE Alu -16 296 1 3499 261 84 73 chr2 241087348 241088911 -9598943 + Charlie7 DNA MER1_type 679 2282 -330 1414 177 7 35 chr2 241088911 241089104 -9598750 - AluJo SINE Alu 0 308 125 1867 156 7 0 chr2 241089104 241089399 -9598455 + AluSx SINE Alu 1 297 -15 1414 177 7 35 chr2 241089399 241089520 -9598334 - AluJo SINE Alu -183 125 2 3499 261 84 73 chr2 241089520 241089572 -9598282 + Charlie7 DNA MER1_type 2282 2332 -280 1281 164 0 9 chr2 241089598 241089811 -9598043 - AluJb SINE Alu -7 305 95 253 386 77 8 chr2 241090292 241090551 -9597303 + L2 LINE L2 2983 3259 -54 334 315 77 0 chr2 241091851 241091981 -9595873 - MIR SINE MIR -11 251 112 880 222 157 4 chr2 241095231 241095492 -9592362 - AluJo SINE Alu -1 311 11 248 293 113 83 chr2 241095564 241095725 -9592129 - L2 LINE L2 -69 3203 3031 2498 53 3 0 chr2 241095725 241096025 -9591829 + AluY SINE Alu 1 301 -10 248 293 113 83 chr2 241096025 241096092 -9591762 - L2 LINE L2 -241 3031 2968 306 217 50 50 chr2 241096174 241096294 -9591560 + MIR SINE MIR 2 121 -141 1799 148 11 0 chr2 241096496 241096779 -9591075 - AluSx SINE Alu -10 302 17 313 253 63 89 chr2 241097092 241097282 -9590572 - L1MC/D LINE L1 -2604 5438 5254 2043 122 0 35 chr2 241097296 241097608 -9590246 - AluSx SINE Alu -11 301 1 528 202 20 0 chr2 241097669 241097768 -9590086 + AluJ/FLAM SINE Alu 1 101 -211 420 230 57 40 chr2 241097797 241097966 -9589888 + L1MB3 LINE L1 5764 5938 -242 * 798 185 60 109 chr2 241097963 241098265 -9589589 + L1MB2 LINE L1 5883 6169 -2 1015 132 33 28 chr2 241098735 241098917 -9588937 - AluSg/x SINE Alu -1 311 129 2020 136 0 10 chr2 241098923 241099232 -9588622 - AluSx SINE Alu -6 306 1 2164 116 0 0 chr2 241099242 241099545 -9588309 - AluSg SINE Alu -7 303 1 1550 211 0 6 chr2 241099612 241099924 -9587930 + AluSx SINE Alu 1 310 -2 2059 133 10 3 chr2 241099942 241100250 -9587604 + AluSg SINE Alu 1 310 0 234 0 0 0 chr2 241100252 241100278 -9587576 + (GGAA)n Simple_repeat Simple_repeat 2 27 0 2570 235 64 7 chr2 241100310 241101029 -9586825 - L1MD2 LINE L1 -154 6205 5446 1420 205 50 0 chr2 241101101 241101384 -9586470 + AluJb SINE Alu 16 312 0 621 277 59 45 chr2 241101537 241101713 -9586141 + L1ME3A LINE L1 5595 5767 -403 2328 98 0 0 chr2 241101713 241102020 -9585834 + AluSg SINE Alu 2 308 -2 621 277 59 45 chr2 241102020 241102200 -9585654 + L1ME3A LINE L1 5767 5956 -214 1485 231 6 3 chr2 241102249 241102560 -9585294 + AluJo SINE Alu 1 312 0 1977 84 3 68 chr2 241102891 241103201 -9584653 - AluSx SINE Alu -11 301 12 1297 196 12 90 chr2 241103365 241103498 -9584356 + AluJo SINE Alu 1 143 -159 2279 77 3 10 chr2 241103498 241103811 -9584043 + AluY SINE Alu 1 311 0 1297 196 12 90 chr2 241103811 241103999 -9583855 + AluJo SINE Alu 143 297 -5 261 79 0 0 chr2 241104025 241104063 -9583791 - MER65A-int LTR ERV1 -3207 4913 4876 830 185 23 93 chr2 241104143 241104359 -9583495 + AluJb SINE Alu 105 305 -7 260 218 0 0 chr2 241104421 241104476 -9583378 - MER65A-int LTR ERV1 -3958 4162 4108 1910 149 3 0 chr2 241104485 241104787 -9583067 - AluSx SINE Alu -9 303 1 261 180 0 0 chr2 241104816 241104866 -9582988 + T-rich Low_complexity Low_complexity 1 50 0 1996 133 0 20 chr2 241104902 241105203 -9582651 - AluSx SINE Alu -17 295 1 850 214 33 34 chr2 241105203 241105639 -9582215 - MER65A-int LTR ERV1 -4428 2330 1720 660 195 8 8 chr2 241105639 241105757 -9582097 + FLAM_C SINE Alu 1 118 -15 850 214 33 34 chr2 241105757 241105798 -9582056 - MER65A-int LTR ERV1 -5038 1720 1680 1511 123 0 0 chr2 241105975 241106187 -9581667 - AluSq SINE Alu -11 302 91 1830 210 15 91 chr2 241106358 241106434 -9581420 - MER65A-int LTR ERV1 -2377 2494 2414 2089 116 10 0 chr2 241106434 241106728 -9581126 + AluSp SINE Alu 1 297 -16 1830 210 15 91 chr2 241106728 241106739 -9581115 - MER65A-int LTR ERV1 -2457 2414 2404 1432 186 95 0 chr2 241106739 241107024 -9580830 + AluSx SINE Alu 1 312 0 1830 210 15 91 chr2 241107024 241107889 -9579965 - MER65A-int LTR ERV1 -2467 2404 1896 1304 250 54 74 chr2 241107024 241107451 -9580403 - LTR57-int LTR ERVL -3817 1526 1115 * 1980 143 0 7 chr2 241107451 241107758 -9580096 + AluSx SINE Alu 7 311 -1 1304 250 54 74 chr2 241107758 241107979 -9579875 - LTR57-int LTR ERVL -4228 1115 891 180 89 44 22 chr2 241107996 241108030 -9579824 + (TA)n Simple_repeat Simple_repeat 1 38 -8 1667 166 7 24 chr2 241108030 241108320 -9579534 - AluJb SINE Alu -27 285 1 180 89 44 22 chr2 241108320 241108330 -9579524 + (TA)n Simple_repeat Simple_repeat 38 46 0 820 161 0 0 chr2 241108330 241108454 -9579400 - FLAM_A SINE Alu -9 124 1 1936 144 0 25 chr2 241108479 241108799 -9579055 - AluSx SINE Alu 0 312 1 3703 221 55 82 chr2 241108802 241109056 -9578798 - MER65A-int LTR ERV1 -2999 1872 1613 2067 124 0 0 chr2 241109056 241109355 -9578499 + AluSq SINE Alu 1 299 -14 3703 221 55 82 chr2 241109355 241109416 -9578438 - MER65A-int LTR ERV1 -3258 1613 1552 2124 119 7 0 chr2 241109416 241109718 -9578136 - AluSq SINE Alu -8 305 2 3703 221 55 82 chr2 241109718 241110699 -9577155 - MER65A-int LTR ERV1 -3319 1552 546 1526 188 14 0 chr2 241110699 241110976 -9576878 - AluJb SINE Alu -24 288 8 3703 221 55 82 chr2 241110976 241111343 -9576511 - MER65A-int LTR ERV1 -4325 546 266 618 14 0 0 chr2 241111343 241111414 -9576440 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 3703 221 55 82 chr2 241111414 241111659 -9576195 - MER65A-int LTR ERV1 -4605 266 16 1405 181 7 0 chr2 241111680 241111972 -9575882 - MER65A LTR ERV1 -11 434 141 2135 150 0 0 chr2 241113374 241113752 -9574102 - AluSq SINE Alu 0 378 1 614 246 77 77 chr2 241113756 241114094 -9573760 + Charlie7 DNA MER1_type 1945 2282 -330 553 146 0 11 chr2 241114097 241114186 -9573668 - AluJ SINE Alu -24 288 201 733 156 8 16 chr2 241114187 241114315 -9573539 - AluJ SINE Alu -182 130 4 1606 133 27 73 chr2 241114406 241114706 -9573148 - AluSx SINE Alu -15 297 12 1912 136 7 7 chr2 241114788 241115082 -9572772 + AluSx SINE Alu 1 294 -18 1541 101 132 19 chr2 241115653 241115910 -9571944 - AluSc SINE Alu 0 309 24 390 316 53 0 chr2 241117297 241117430 -9570424 - MIR SINE MIR -11 251 112 207 0 0 0 chr2 241119705 241119728 -9568126 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1271 201 73 7 chr2 241120956 241121229 -9566625 - AluJb SINE Alu -17 295 5 1309 166 109 14 chr2 241121232 241121515 -9566339 - AluJb SINE Alu -2 310 1 903 101 8 8 chr2 241121701 241121830 -9566024 + AluSp SINE Alu 35 163 -150 2020 88 0 58 chr2 241122337 241122558 -9565296 - AluSx SINE Alu 0 312 141 2004 130 16 0 chr2 241122558 241122865 -9564989 - AluSx SINE Alu 0 312 1 2020 88 0 58 chr2 241122865 241122985 -9564869 - AluSx SINE Alu -171 141 16 1894 110 7 0 chr2 241122985 241123267 -9564587 - LTR43 LTR ERV1 -318 284 1 322 318 66 76 chr2 241123390 241123588 -9564266 - L1ME3A LINE L1 0 6170 5975 1735 143 43 0 chr2 241123591 241123870 -9563984 - AluJb SINE Alu -20 292 2 1648 107 43 4 chr2 241123915 241124196 -9563658 + LTR43 LTR ERV1 311 602 0 1398 183 146 14 chr2 241124219 241124569 -9563285 + LTR47A LTR ERVL 1 396 -56 1618 173 48 3 chr2 241124571 241124860 -9562994 + AluJo SINE Alu 9 310 -2 252 352 8 0 chr2 241124916 241125044 -9562810 - LOR1-int LTR ERV1 -529 4425 4297 1959 116 3 14 chr2 241125045 241125368 -9562486 + AluSx SINE Alu 1 320 0 886 144 101 1 chr2 241125915 241126200 -9561654 - LOR1-int LTR ERV1 -341 7779 7434 1865 154 7 3 chr2 241126200 241126505 -9561349 - AluSx SINE Alu -6 306 1 1430 190 15 19 chr2 241126529 241126798 -9561056 + AluJb SINE Alu 1 268 -44 450 0 0 0 chr2 241126803 241126853 -9561001 + (TG)n Simple_repeat Simple_repeat 2 51 0 1921 103 3 53 chr2 241126853 241127153 -9560701 - AluSq SINE Alu -28 285 1 2055 136 0 3 chr2 241127494 241127795 -9560059 - AluSx SINE Alu -12 300 1 527 216 117 9 chr2 241129422 241129635 -9558219 + AluJo SINE Alu 7 242 -70 1302 203 24 17 chr2 241129820 241130110 -9557744 + AluJo SINE Alu 1 292 -20 30 77 0 0 chr2 241130110 241130175 -9557679 + AT_rich Low_complexity Low_complexity 1 65 0 3890 124 15 23 chr2 241131804 241132489 -9555365 - pTR5 LTR ERV1 -739 1699 1021 276 173 25 25 chr2 241133879 241133960 -9553894 + LTR57-int LTR ERVL 992 1072 -4271 623 93 0 0 chr2 241133969 241134055 -9553799 - AluSg/x SINE Alu -6 303 218 625 190 75 29 chr2 241134060 241134328 -9553526 - LOR1-int LTR ERV1 -566 4314 4060 558 224 103 0 chr2 241134328 241134435 -9553419 + FLAM_C SINE Alu 1 118 -15 625 190 75 29 chr2 241134435 241134446 -9553408 - LOR1-int LTR ERV1 -820 4060 1781 26 30 0 0 chr2 241134446 241134479 -9553375 + AT_rich Low_complexity Low_complexity 1 33 0 1903 194 33 35 chr2 241134527 241134782 -9553072 - LOR1-int LTR ERV1 -6377 1743 1489 2086 115 3 0 chr2 241134782 241135070 -9552784 + AluY SINE Alu 11 299 -12 1903 194 33 35 chr2 241135070 241135412 -9552442 - LOR1-int LTR ERV1 -6631 1489 1147 1057 94 0 0 chr2 241135413 241135551 -9552303 + AluSq/x SINE Alu 1 138 -175 1065 133 36 0 chr2 241135695 241135860 -9551994 - AluSx SINE Alu -137 175 5 1062 129 6 0 chr2 241135860 241136030 -9551824 + L1MA6 LINE L1 6130 6300 0 1328 184 109 4 chr2 241136037 241136375 -9551479 + AluJb SINE Alu 1 365 0 203 388 68 14 chr2 241136603 241136750 -9551104 - L3 LINE CR1 -584 993 839 350 56 0 19 chr2 241188934 241188988 -9498866 + (TC)n Simple_repeat Simple_repeat 1 53 0 1598 168 25 7 chr2 241188988 241189262 -9498592 - AluJb SINE Alu -31 281 3 275 288 0 0 chr2 241191082 241191148 -9496706 + MIR SINE MIR 106 171 -91 226 335 11 73 chr2 241191601 241191780 -9496074 + L3 LINE CR1 1386 1553 -24 629 248 104 5 chr2 241191783 241191985 -9495869 - MER58A DNA MER1_type 0 224 3 2401 95 13 0 chr2 241192371 241192677 -9495177 + AluSg SINE Alu 1 310 0 317 292 88 26 chr2 241193153 241193345 -9494509 - MLT1L LTR MaLR 0 615 412 2058 103 53 3 chr2 241193583 241193865 -9493989 - AluSx SINE Alu -16 296 1 2410 50 13 17 chr2 241193874 241194175 -9493679 - AluY SINE Alu -11 300 1 933 243 108 42 chr2 241194287 241194687 -9493167 + MLT1G LTR MaLR 127 552 -38 2165 159 31 38 chr2 241194690 241194945 -9492909 - L1MB2 LINE L1 -3 6168 5916 2493 93 0 0 chr2 241194945 241195246 -9492608 + AluSx SINE Alu 1 301 -11 2165 159 31 38 chr2 241195246 241195468 -9492386 - L1MB2 LINE L1 -255 5916 5694 2371 103 6 0 chr2 241195556 241195867 -9491987 + AluSp SINE Alu 1 313 0 296 249 111 71 chr2 241195958 241196183 -9491671 + HAL1b LINE L1 571 804 -544 360 0 0 0 chr2 241196189 241196229 -9491625 + (CA)n Simple_repeat Simple_repeat 2 41 0 784 181 32 7 chr2 241196232 241196387 -9491467 - Tigger2 DNA MER2_type -11 2707 2549 712 218 6 6 chr2 241196395 241196551 -9491303 + AluJb SINE Alu 144 299 -13 2190 122 0 0 chr2 241196554 241196848 -9491006 - AluJb SINE Alu -18 294 1 1539 169 21 3 chr2 241196973 241197257 -9490597 - Tigger2 DNA MER2_type -150 2568 2280 378 157 0 14 chr2 241197255 241197325 -9490529 - Tigger2 DNA MER2_type -2649 69 1 * 583 222 0 12 chr2 241197341 241197512 -9490342 + (TG)n Simple_repeat Simple_repeat 2 170 0 527 294 200 10 chr2 241197802 241198112 -9489742 - L3 LINE CR1 -3 1574 1206 2415 106 0 0 chr2 241198920 241199223 -9488631 - AluSx SINE Alu -9 303 1 2277 102 7 0 chr2 241199579 241199882 -9487972 - AluY SINE Alu -6 305 1 1836 160 0 3 chr2 241199906 241200188 -9487666 - AluJo SINE Alu -19 293 13 2522 195 53 14 chr2 241200205 241200770 -9487084 - L1MD3 LINE L1 -14 7981 7395 457 197 8 102 chr2 241200771 241200808 -9487046 - MLT1F1 LTR MaLR -451 116 77 2771 34 6 6 chr2 241200808 241201157 -9486697 - L1PA5 LINE L1 -1 6153 5805 457 197 8 102 chr2 241201157 241201246 -9486608 - MLT1F1 LTR MaLR -490 77 2 580 206 8 15 chr2 241201248 241201379 -9486475 - L1MD3 LINE L1 -718 7277 7148 2093 129 0 11 chr2 241201379 241201704 -9486150 + AluSx SINE Alu 1 322 0 1005 148 18 6 chr2 241201714 241201883 -9485971 + FAM SINE Alu 1 171 -4 2211 195 27 14 chr2 241201883 241202366 -9485488 - L1MC3 LINE L1 -179 7606 7118 1150 191 26 105 chr2 241202475 241202905 -9484949 + Charlie1 DNA MER1_type 2212 2607 -154 248 133 0 0 chr2 241202908 241202953 -9484901 - L1MB7 LINE L1 -13 6171 6127 511 177 0 0 chr2 241202972 241203068 -9484786 - L1MB7 LINE L1 -42 6142 6047 2190 121 0 0 chr2 241203138 241203449 -9484405 - AluSx SINE Alu 0 311 1 1213 261 120 21 chr2 241203852 241204319 -9483535 + MLT1G1 LTR MaLR 80 592 -3 441 280 77 92 chr2 241204502 241204554 -9483300 - L1ME4a LINE L1 -4 6117 6066 2462 82 0 0 chr2 241204554 241204857 -9482997 - AluSx SINE Alu -9 303 1 441 280 77 92 chr2 241204857 241205011 -9482843 - L1ME4a LINE L1 -55 6066 5914 1906 144 14 0 chr2 241205032 241205338 -9482516 - AluSx SINE Alu 0 310 1 827 118 0 22 chr2 241205752 241205888 -9481966 + FLAM_C SINE Alu 1 133 0 24 67 0 0 chr2 241205913 241205958 -9481896 + AT_rich Low_complexity Low_complexity 1 45 0 2314 106 0 28 chr2 241206032 241206354 -9481500 + AluSq SINE Alu 1 313 0 1168 181 25 16 chr2 241207057 241207300 -9480554 + L1MC2 LINE L1 5926 6170 -174 1469 194 98 42 chr2 241207304 241207443 -9480411 + MER21B LTR ERV1 369 499 -364 2412 73 20 10 chr2 241207443 241207613 -9480241 - AluSx SINE Alu -9 303 127 2275 113 10 0 chr2 241207613 241207922 -9479932 - AluSp SINE Alu -1 312 1 2412 73 20 10 chr2 241207922 241208051 -9479803 - AluSx SINE Alu -185 127 1 1469 194 98 42 chr2 241208051 241208247 -9479607 + MER21B LTR ERV1 499 723 -140 810 161 0 0 chr2 241208253 241208365 -9479489 + AluSq/x SINE Alu 9 120 -192 360 155 0 0 chr2 241208395 241208453 -9479401 + MER21B LTR ERV1 703 760 -103 1484 143 39 81 chr2 241208454 241208611 -9479243 - AluJo SINE Alu -15 297 158 2349 97 0 3 chr2 241208611 241208910 -9478944 - AluSg SINE Alu -8 302 5 1484 143 39 81 chr2 241208910 241209060 -9478794 - AluJo SINE Alu -154 158 3 868 134 0 15 chr2 241209162 241209296 -9478558 + FLAM_C SINE Alu 1 132 -1 596 176 6 39 chr2 241209301 241209483 -9478371 + GA-rich Low_complexity Low_complexity 2 177 0 285 252 126 0 chr2 241209787 241209898 -9477956 - L1M4 LINE L1 -2147 3999 3875 205 288 68 0 chr2 241210521 241210594 -9477260 - MIR SINE MIR -62 200 123 2244 98 7 10 chr2 241210788 241211084 -9476770 + AluSx SINE Alu 1 295 -17 1120 54 8 0 chr2 241211086 241211216 -9476638 + AluSg SINE Alu 1 131 -179 404 165 52 72 chr2 241212025 241212122 -9475732 + MER5A DNA MER1_type 11 105 -84 1474 175 0 12 chr2 241212623 241212874 -9474980 - AluJo SINE Alu -64 248 1 2462 82 0 0 chr2 241212895 241213188 -9474666 + AluSq SINE Alu 1 293 -20 2418 102 0 6 chr2 241214083 241214396 -9473458 + AluSx SINE Alu 1 311 -1 819 225 52 5 chr2 241214951 241215142 -9472712 + MIR SINE MIR 40 239 -23 1152 186 121 43 chr2 241215750 241216030 -9471824 + AluJb SINE Alu 1 302 0 2218 68 65 14 chr2 241216038 241216332 -9471522 + AluSg1 SINE Alu 1 309 0 2219 114 0 0 chr2 241216636 241216935 -9470919 + AluSx SINE Alu 1 299 -13 478 312 49 5 chr2 241217032 241217237 -9470617 - MLT1K LTR MaLR -41 547 334 754 289 13 18 chr2 241217351 241217576 -9470278 + MIR SINE MIR 17 240 -22 2367 92 3 0 chr2 241217643 241217937 -9469917 + AluSg SINE Alu 1 295 -15 861 257 18 42 chr2 241218144 241218428 -9469426 - MLT1C LTR MaLR -4 463 187 2353 100 3 0 chr2 241218443 241218742 -9469112 - AluSx SINE Alu -12 300 1 687 208 64 0 chr2 241220460 241220585 -9467269 - FLAM_C SINE Alu 0 133 1 1643 165 38 111 chr2 241221372 241221547 -9466307 - L1MC3 LINE L1 -790 6995 6809 2139 92 3 11 chr2 241221547 241221829 -9466025 - AluSx SINE Alu -32 280 1 1643 165 38 111 chr2 241221829 241221975 -9465879 - L1MC3 LINE L1 -976 6809 6726 1977 147 0 7 chr2 241221975 241222261 -9465593 + AluSx SINE Alu 1 284 -28 1643 165 38 111 chr2 241222261 241222471 -9465383 - L1MC3 LINE L1 -1059 6726 6502 821 254 163 3 chr2 241224242 241224561 -9463293 + L1MB5 LINE L1 5255 5624 -2184 2307 161 118 0 chr2 241224561 241224984 -9462870 - MLT2B2 LTR ERVL -42 473 1 251 198 147 51 chr2 241224987 241225112 -9462742 + L1MB5 LINE L1 5622 5766 -355 871 207 0 40 chr2 241225112 241225286 -9462568 + FAM SINE Alu 1 167 -8 251 198 147 51 chr2 241225286 241225317 -9462537 + L1MB5 LINE L1 5766 5793 -328 2233 109 6 13 chr2 241225340 241225651 -9462203 - AluSq SINE Alu -4 309 1 456 332 15 0 chr2 241225691 241225890 -9461964 + L1M4 LINE L1 4023 4224 -1922 1711 182 10 3 chr2 241225894 241226185 -9461669 + AluJb SINE Alu 1 293 -19 342 0 0 0 chr2 241226186 241226224 -9461630 + (CA)n Simple_repeat Simple_repeat 2 39 0 286 182 18 0 chr2 241226330 241226385 -9461469 - HERVL LTR ERVL -1076 4578 4523 453 258 62 34 chr2 241226388 241226597 -9461257 - MER34B LTR ERV1 -5 560 346 355 44 0 0 chr2 241226710 241226808 -9461046 + AluSp/q SINE Alu 243 340 0 834 191 4 53 chr2 241226808 241226895 -9460959 + L1MB5 LINE L1 5927 6017 -157 2348 115 3 0 chr2 241226895 241227207 -9460647 - AluSq SINE Alu 0 313 1 834 191 4 53 chr2 241227207 241227344 -9460510 + L1MB5 LINE L1 6017 6140 -34 895 153 0 53 chr2 241227347 241227517 -9460337 + FRAM SINE Alu 1 161 -5 1293 132 13 70 chr2 241227675 241227704 -9460150 - AluJo SINE Alu -16 296 267 2513 61 0 0 chr2 241227704 241228001 -9459853 + AluY SINE Alu 1 297 -14 1293 132 13 70 chr2 241228001 241228199 -9459655 - AluJo SINE Alu -45 267 82 430 282 27 69 chr2 241228978 241229039 -9458815 - MIR SINE MIR -48 214 152 2467 88 3 0 chr2 241229039 241229346 -9458508 - AluSx SINE Alu -1 311 4 430 282 27 69 chr2 241229346 241229483 -9458371 - MIR SINE MIR -110 152 24 2331 81 0 3 chr2 241229783 241230067 -9457787 + AluSq SINE Alu 1 283 -30 1203 189 14 42 chr2 241230342 241230628 -9457226 + MER33 DNA MER1_type 1 278 -46 2164 142 3 0 chr2 241230634 241230943 -9456911 - AluJb SINE Alu -2 310 1 2323 112 3 3 chr2 241230989 241231337 -9456517 + AluSx SINE Alu 1 348 0 586 297 62 46 chr2 241232410 241232716 -9455138 + L2 LINE L2 2930 3240 -73 1816 136 33 36 chr2 241232724 241233025 -9454829 - AluJo SINE Alu -12 300 1 254 219 62 47 chr2 241233132 241233260 -9454594 + L1MC/D LINE L1 5701 5830 -1978 2135 186 27 112 chr2 241233293 241233504 -9454350 + Charlie1a DNA MER1_type 72 299 -2462 1952 147 10 13 chr2 241233504 241233803 -9454051 + AluJb SINE Alu 1 298 -14 2135 186 27 112 chr2 241233803 241233859 -9453995 + Charlie1a DNA MER1_type 299 358 -2403 1995 128 0 7 chr2 241233859 241234132 -9453722 + AluSx SINE Alu 1 271 -41 2135 186 27 112 chr2 241234132 241234499 -9453355 + Charlie1a DNA MER1_type 358 653 -802 1857 153 49 33 chr2 241234499 241234610 -9453244 + AluJo SINE Alu 1 109 -203 207 0 0 0 chr2 241234610 241234633 -9453221 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 261 0 0 0 chr2 241234632 241234661 -9453193 + (TA)n Simple_repeat Simple_repeat 2 30 0 1857 153 49 33 chr2 241234633 241234856 -9452998 + AluJo SINE Alu 109 312 0 242 320 71 78 chr2 241236336 241236399 -9451455 + L3b LINE CR1 1263 1325 -258 2126 104 17 3 chr2 241236399 241236711 -9451143 - AluSx SINE Alu 0 312 1 242 320 71 78 chr2 241236711 241236916 -9450938 + L3b LINE CR1 1325 1529 -54 365 296 40 53 chr2 241238520 241238672 -9449182 + MIR3 SINE MIR 49 198 -10 727 176 8 8 chr2 241239530 241239649 -9448205 + FLAM_A SINE Alu 1 119 -14 200 174 0 43 chr2 241239649 241239695 -9448159 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 2521 65 0 0 chr2 241239974 241240265 -9447589 + AluSc SINE Alu 2 292 -17 261 119 0 0 chr2 241240265 241240307 -9447547 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 2455 89 0 0 chr2 241240436 241240738 -9447116 + AluSx SINE Alu 1 302 -10 236 360 0 0 chr2 241240947 241241022 -9446832 + MIR3 SINE MIR 127 201 -7 2210 52 14 24 chr2 241241406 241241728 -9446126 + AluY SINE Alu 1 319 0 1047 142 40 0 chr2 241241787 241241963 -9445891 - AluJb SINE Alu 0 312 130 1774 161 7 40 chr2 241241972 241242104 -9445750 + AluJo SINE Alu 13 148 -164 2047 102 7 26 chr2 241242104 241242407 -9445447 + AluSx SINE Alu 1 297 -15 1774 161 7 40 chr2 241242407 241242573 -9445281 + AluJo SINE Alu 148 301 -11 28 35 0 35 chr2 241242580 241242612 -9445242 + AT_rich Low_complexity Low_complexity 1 32 -23 773 138 17 0 chr2 241242612 241242728 -9445126 + FLAM_C SINE Alu 1 118 -15 28 35 0 35 chr2 241242728 241242752 -9445102 + AT_rich Low_complexity Low_complexity 32 55 0 926 102 82 68 chr2 241242806 241242886 -9444968 + MER2 DNA MER2_type 9 86 -259 2230 107 28 0 chr2 241242886 241243176 -9444678 + AluSx SINE Alu 1 298 -14 926 102 82 68 chr2 241243176 241243374 -9444480 + MER2 DNA MER2_type 86 323 -22 2177 114 3 3 chr2 241243447 241243755 -9444099 + AluSg SINE Alu 1 308 -2 2358 107 0 3 chr2 241243850 241244159 -9443695 - AluSx SINE Alu -4 308 1 217 289 53 13 chr2 241244265 241244341 -9443513 - L2 LINE L2 -1 3271 3193 1192 104 37 0 chr2 241245200 241245363 -9442491 + AluSg/x SINE Alu 110 278 -32 1689 170 10 3 chr2 241245391 241245679 -9442175 + AluJb SINE Alu 1 290 -22 1599 200 0 4 chr2 241245690 241245970 -9441884 + AluJo SINE Alu 1 279 -33 602 138 11 0 chr2 241245970 241246064 -9441790 - AluJ/FLAM SINE Alu -216 96 2 738 168 42 0 chr2 241246827 241246946 -9440908 - FLAM_A SINE Alu -9 124 1 1633 203 17 87 chr2 241247086 241247517 -9440337 + L1ME LINE L1 5171 5631 -535 2395 119 0 0 chr2 241247517 241247828 -9440026 - AluSx SINE Alu -1 311 1 1633 203 17 87 chr2 241247828 241247937 -9439917 + L1ME LINE L1 5631 5640 -526 2068 144 0 0 chr2 241247937 241248228 -9439626 + AluSx SINE Alu 1 291 -21 1633 203 17 87 chr2 241248228 241248397 -9439457 + L1ME LINE L1 5640 5819 -347 399 149 0 0 chr2 241248398 241248472 -9439382 + (CA)n Simple_repeat Simple_repeat 1 74 0 353 164 0 0 chr2 241248488 241248549 -9439305 + Tigger2 DNA MER2_type 1 61 -2657 353 193 57 0 chr2 241248726 241248814 -9439040 + HsTC2 DNA Tc2 1801 1893 -5 2377 73 28 0 chr2 241250824 241251110 -9436744 + AluSc SINE Alu 1 294 -15 396 0 0 0 chr2 241251597 241251641 -9436213 + (CA)n Simple_repeat Simple_repeat 2 45 0 617 161 11 0 chr2 241252166 241252259 -9435595 + FLAM_C SINE Alu 14 107 -36 458 33 17 0 chr2 241252547 241252607 -9435247 + (CA)n Simple_repeat Simple_repeat 1 61 0 237 33 0 0 chr2 241252721 241252751 -9435103 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 283 300 61 36 chr2 241252751 241253185 -9434669 - L1MC4a LINE L1 -1634 6174 5707 207 0 0 0 chr2 241255275 241255298 -9432556 + (TTG)n Simple_repeat Simple_repeat 2 24 0 234 0 0 0 chr2 241255904 241255930 -9431924 + (TG)n Simple_repeat Simple_repeat 2 27 0 295 208 101 10 chr2 241256620 241256752 -9431102 - LTR50 LTR ERVL -2 793 383 485 210 171 6 chr2 241256890 241257066 -9430788 - LTR50 LTR ERVL -590 205 1 2385 81 0 3 chr2 241257395 241257693 -9430161 + AluSg SINE Alu 1 297 -13 411 280 32 6 chr2 241257705 241257862 -9429992 - MERVL LTR ERVL -160 5325 5165 522 255 84 8 chr2 241257919 241258228 -9429626 - MERVL LTR ERVL -644 5120 4750 832 271 66 0 chr2 241258263 241258521 -9429333 - MERVL LTR ERVL -1083 4681 4407 405 204 344 5 chr2 241259258 241259444 -9428410 - MIR SINE MIR -12 250 2 189 0 0 0 chr2 241259824 241259845 -9428009 + (T)n Simple_repeat Simple_repeat 1 21 0 572 163 14 116 chr2 241259845 241259992 -9427862 - AluJb SINE Alu -179 133 2 272 293 49 0 chr2 241260009 241260114 -9427740 - AluSg/x SINE Alu -98 202 134 441 263 10 0 chr2 241261576 241261675 -9426179 + ERVL LTR ERVL 4468 4567 -1197 2035 125 24 0 chr2 241261760 241262047 -9425807 + AluSx SINE Alu 1 294 -18 26 50 0 0 chr2 241262047 241262087 -9425767 + AT_rich Low_complexity Low_complexity 1 40 0 286 248 110 18 chr2 241262093 241262202 -9425652 + MER34B LTR ERV1 38 156 -409 2264 45 0 4 chr2 241262383 241262649 -9425205 + AluY SINE Alu 3 267 -44 2241 104 6 22 chr2 241262765 241263082 -9424772 - AluSx SINE Alu 0 312 1 710 206 8 0 chr2 241263545 241263671 -9424183 - FLAM_A SINE Alu -4 129 3 232 261 118 42 chr2 241263957 241264076 -9423778 - L3 LINE CR1 -142 1435 1308 2550 66 0 0 chr2 241264157 241264460 -9423394 - AluY SINE Alu -8 303 1 1950 168 0 7 chr2 241264781 241265091 -9422763 - AluJb SINE Alu -4 308 1 2281 148 52 55 chr2 241265102 241265148 -9422706 - L1MB3 LINE L1 -1 6182 6137 1575 168 46 14 chr2 241265148 241265433 -9422421 - AluJo SINE Alu -17 295 2 2281 148 52 55 chr2 241265433 241265881 -9421973 - L1MB3 LINE L1 -46 6137 5689 949 121 7 7 chr2 241265882 241266023 -9421831 + AluSq/x SINE Alu 1 141 -172 362 151 0 3 chr2 241266023 241266091 -9421763 - Alu SINE Alu -248 52 1 212 270 262 40 chr2 241266091 241266217 -9421637 - L3 LINE CR1 -764 813 660 1225 170 59 9 chr2 241266331 241266799 -9421055 + L1MB7 LINE L1 5576 6184 0 197 196 250 36 chr2 241266840 241266896 -9420958 - L3 LINE CR1 -1232 345 278 2726 136 14 9 chr2 241267569 241267995 -9419859 - MSTA LTR MaLR 0 428 1 2317 76 0 21 chr2 241268037 241268372 -9419482 - AluY SINE Alu 0 329 1 677 176 0 34 chr2 241268372 241268491 -9419363 - FLAM_A SINE Alu -12 130 16 2293 113 3 0 chr2 241268568 241268870 -9418984 + AluSx SINE Alu 1 303 -9 311 133 0 0 chr2 241268870 241268915 -9418939 + AluSg/x SINE Alu 132 176 -124 1184 200 14 29 chr2 241269180 241269455 -9418399 - AluY SINE Alu -40 271 1 665 168 0 35 chr2 241269461 241269574 -9418280 - FLAM_A SINE Alu -18 124 16 2338 112 0 0 chr2 241269651 241269954 -9417900 + AluSx SINE Alu 1 303 -9 1190 146 0 0 chr2 241269954 241270132 -9417722 + AluSg/x SINE Alu 134 311 -1 1594 174 71 3 chr2 241270138 241270489 -9417365 - L1MB3 LINE L1 -39 6144 5770 2214 92 31 3 chr2 241270524 241270816 -9417038 - AluSx SINE Alu -12 300 1 340 216 0 0 chr2 241270818 241270892 -9416962 - L1MB3 LINE L1 -397 5786 5713 969 111 25 80 chr2 241272261 241272319 -9415535 - L1MA4 LINE L1 -1 6299 6239 1932 146 27 0 chr2 241272319 241272620 -9415234 - AluSx SINE Alu -3 309 1 969 111 25 80 chr2 241272620 241272760 -9415094 - L1MA4 LINE L1 -61 6239 6112 1559 160 7 30 chr2 241272775 241273044 -9414810 - AluJo SINE Alu -47 265 3 1468 158 112 29 chr2 241273062 241273369 -9414485 - AluJo SINE Alu 0 312 1 816 160 8 8 chr2 241273417 241273548 -9414306 - AluJo SINE Alu -177 135 5 207 0 0 0 chr2 241273561 241273584 -9414270 + (T)n Simple_repeat Simple_repeat 1 23 0 2715 46 0 0 chr2 241273699 241274004 -9413850 - AluY SINE Alu -6 305 1 939 202 6 6 chr2 241274006 241274174 -9413680 - AluJb SINE Alu -16 296 129 2157 139 0 0 chr2 241274519 241274813 -9413041 - AluSx SINE Alu -18 294 1 523 228 0 0 chr2 241274978 241275079 -9412775 - FRAM SINE Alu -77 99 1 723 231 0 0 chr2 241276127 241276287 -9411567 + MLT1B LTR MaLR 231 390 0 2234 93 3 26 chr2 241276607 241276948 -9410906 - AluSq SINE Alu 0 313 2 278 108 108 68 chr2 241276967 241277041 -9410813 + MLT1K LTR MaLR 511 587 -1 2305 122 0 0 chr2 241277713 241278025 -9409829 - AluSx SINE Alu 0 312 1 2415 88 0 0 chr2 241278694 241278989 -9408865 - AluSg SINE Alu -14 296 2 2015 116 62 0 chr2 241279265 241279541 -9408313 + AluSx SINE Alu 1 293 -19 504 338 40 33 chr2 241279618 241279893 -9407961 + L1MC4a LINE L1 4885 5161 -985 285 273 59 130 chr2 241280140 241280242 -9407612 - L1MB3 LINE L1 -2143 5665 5557 1681 156 45 17 chr2 241280242 241280531 -9407323 + AluJo SINE Alu 1 297 -15 2338 90 0 3 chr2 241280533 241280856 -9406998 + AluSp SINE Alu 1 322 0 285 273 59 130 chr2 241280856 241280879 -9406975 - L1MB3 LINE L1 -2252 5556 5533 2246 93 4 0 chr2 241280879 241281159 -9406695 + AluSx SINE Alu 17 297 -15 285 273 59 130 chr2 241281159 241281265 -9406589 - L1MB3 LINE L1 -2275 5533 5445 422 251 202 22 chr2 241281679 241281862 -9405992 + MIR SINE MIR 35 250 -12 233 302 145 12 chr2 241282548 241282720 -9405134 + L2 LINE L2 2866 3060 -212 589 118 0 0 chr2 241282820 241282905 -9404949 - Alu SINE Alu -8 303 219 2132 123 3 0 chr2 241282990 241283290 -9404564 - AluSg SINE Alu -5 305 5 356 303 67 5 chr2 241283291 241283486 -9404368 + L1MC4a LINE L1 5661 5867 -1941 244 170 21 21 chr2 241283747 241283794 -9404060 + L2 LINE L2 3261 3307 -6 1703 114 4 0 chr2 241284066 241284368 -9403486 + AluSg/x SINE Alu 83 385 0 2253 112 3 0 chr2 241284981 241285277 -9402577 + AluSx SINE Alu 1 297 -15 272 303 106 0 chr2 241285372 241285514 -9402340 - MLT1J LTR MaLR -280 231 75 739 214 42 18 chr2 241285939 241286130 -9401724 + FRAM SINE Alu 1 176 0 876 142 0 0 chr2 241286178 241286298 -9401556 + FLAM_C SINE Alu 1 120 -23 524 134 10 0 chr2 241286298 241286395 -9401459 + (CA)n Simple_repeat Simple_repeat 1 98 0 1953 157 0 10 chr2 241286525 241286818 -9401036 + AluJo SINE Alu 1 290 -22 343 273 175 98 chr2 241286952 241287088 -9400766 + L1MC/D LINE L1 3629 3753 -2393 1871 133 63 3 chr2 241287088 241287373 -9400481 + AluSx SINE Alu 1 302 -10 343 273 175 98 chr2 241287373 241287584 -9400270 + L1MC/D LINE L1 3753 4003 -2143 2175 109 7 0 chr2 241287590 241287903 -9399951 + AluSp SINE Alu 1 313 0 401 252 10 0 chr2 241288050 241288153 -9399701 + U13 snRNA snRNA 1 104 0 264 313 61 30 chr2 241288204 241288466 -9399388 + L1MC/D LINE L1 5008 5277 -869 1720 169 20 26 chr2 241288520 241288822 -9399032 + AluJo SINE Alu 1 300 -12 317 316 38 0 chr2 241288830 241288909 -9398945 + L1MC/D LINE L1 5284 5365 -2443 320 283 45 45 chr2 241288912 241289078 -9398776 + L1MC/D LINE L1 5437 5605 -2203 1969 160 3 7 chr2 241289078 241289372 -9398482 + AluSx SINE Alu 1 293 -19 25 0 0 0 chr2 241289631 241289656 -9398198 + AT_rich Low_complexity Low_complexity 1 25 0 1571 145 4 0 chr2 241289666 241289894 -9397960 - AluSx SINE Alu -83 229 1 317 298 50 19 chr2 241290085 241290246 -9397608 + L1MC2 LINE L1 5437 5602 -2206 1900 136 40 0 chr2 241290251 241290563 -9397291 + AluSx SINE Alu 1 323 0 1989 153 23 0 chr2 241292315 241292615 -9395239 + AluSx SINE Alu 1 307 -5 480 180 0 0 chr2 241292981 241293070 -9394784 + L1MC2 LINE L1 5607 5695 -649 917 216 0 0 chr2 241293072 241293243 -9394611 - AluJb SINE Alu -5 307 137 1989 122 5 277 chr2 241293243 241293469 -9394385 + L1MC2 LINE L1 5685 5971 -373 549 244 25 0 chr2 241293469 241293588 -9394266 + FLAM_A SINE Alu 5 126 -16 1989 122 5 277 chr2 241293588 241293836 -9394018 + L1MC2 LINE L1 5971 6092 -252 1622 189 0 35 chr2 241293836 241293981 -9393873 + AluJb SINE Alu 1 150 -162 2022 143 0 26 chr2 241293981 241294289 -9393565 + AluJb SINE Alu 1 300 -12 1622 189 0 35 chr2 241294289 241294455 -9393399 + AluJb SINE Alu 150 301 -11 1989 122 5 277 chr2 241294455 241294643 -9393211 + L1MC2 LINE L1 6092 6329 -15 2188 90 0 17 chr2 241294647 241294976 -9392878 + AluSx SINE Alu 5 328 0 21 0 0 0 chr2 241295138 241295159 -9392695 + AT_rich Low_complexity Low_complexity 1 21 0 2096 124 33 13 chr2 241295159 241295465 -9392389 + AluSx SINE Alu 1 312 0 709 307 100 65 chr2 241295636 241296274 -9391580 + L2 LINE L2 2553 3242 -30 2462 97 3 3 chr2 241296417 241296757 -9391097 + AluSp SINE Alu 1 340 0 363 197 28 0 chr2 241296918 241296989 -9390865 + MIR SINE MIR 92 164 -98 1584 173 0 15 chr2 241297428 241297688 -9390166 + AluJb SINE Alu 22 277 -35 2249 141 0 0 chr2 241297842 241298154 -9389700 - AluSx SINE Alu 0 312 1 1140 193 0 0 chr2 241298203 241298390 -9389464 - AluJo SINE Alu -5 307 121 2385 160 151 21 chr2 241298431 241298907 -9388947 - MLT1F LTR MaLR 0 542 5 486 225 29 14 chr2 241298912 241299050 -9388804 - LTR67 LTR ERVL -6 551 412 492 278 122 28 chr2 241299393 241299648 -9388206 + L1MC4a LINE L1 5635 5819 -302 189 0 0 0 chr2 241299652 241299673 -9388181 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1381 147 144 63 chr2 241299697 241300044 -9387810 - THE1C LTR MaLR 0 375 1 180 357 0 48 chr2 241300047 241300131 -9387723 + L2 LINE L2 3139 3218 -54 1995 99 72 31 chr2 241300161 241300454 -9387400 - AluSp SINE Alu -2 311 7 2203 91 35 0 chr2 241300461 241300746 -9387108 - AluSq SINE Alu -18 295 1 225 94 0 0 chr2 241300932 241300964 -9386890 + (CCA)n Simple_repeat Simple_repeat 3 34 0 2341 93 0 7 chr2 241300997 241301314 -9386540 + AluSx SINE Alu 1 312 0 1358 180 4 60 chr2 241301687 241301826 -9386028 - AluJo SINE Alu -50 262 144 1892 99 92 0 chr2 241301826 241302098 -9385756 - AluSg SINE Alu -13 297 1 1358 180 4 60 chr2 241302098 241302225 -9385629 - AluJo SINE Alu -168 144 11 1278 261 120 42 chr2 241302266 241302818 -9385036 - MLT1G1 LTR MaLR 0 595 1 1020 146 6 6 chr2 241302836 241302994 -9384860 - AluJb SINE Alu -20 292 135 2070 149 0 16 chr2 241303366 241303675 -9384179 - AluSx SINE Alu -8 304 1 279 250 12 0 chr2 241303678 241303762 -9384092 + L1ME1 LINE L1 6082 6166 0 205 189 22 133 chr2 241304078 241304168 -9383686 - L2 LINE L2 -266 3006 2927 1095 157 42 37 chr2 241304269 241304486 -9383368 - AluJo SINE Alu -8 304 87 299 225 0 42 chr2 241304506 241304577 -9383277 - MER5A DNA MER1_type -92 97 30 478 300 60 79 chr2 241304590 241304630 -9383224 - L2 LINE L2 -1259 2055 2016 2333 69 14 0 chr2 241304630 241304918 -9382936 + AluSp SINE Alu 1 292 -21 478 300 60 79 chr2 241304918 241305200 -9382654 - L2 LINE L2 -1298 2016 1730 2277 61 14 0 chr2 241305200 241305511 -9382343 - AluSp SINE Alu 0 315 1 478 300 60 79 chr2 241305511 241305523 -9382331 - L2 LINE L2 -1584 1730 1719 2208 79 0 33 chr2 241305523 241305826 -9382028 - AluSc SINE Alu -15 294 2 478 300 60 79 chr2 241305826 241305941 -9381913 - L2 LINE L2 -1595 1719 1611 548 124 113 0 chr2 241305954 241306051 -9381803 + MER53 DNA DNA 1 108 -81 29 28 0 0 chr2 241306797 241306833 -9381021 + GC_rich Low_complexity Low_complexity 1 36 0 879 278 129 37 chr2 241308283 241308718 -9379136 - L2 LINE L2 0 3313 2839 311 357 43 35 chr2 241309193 241309451 -9378403 - HAL1 LINE L1 -1298 1209 950 204 194 16 48 chr2 241310173 241310235 -9377619 + A-rich Low_complexity Low_complexity 1 60 0 419 222 0 0 chr2 241310627 241310708 -9377146 - AluSg/x SINE Alu -15 295 215 474 207 12 0 chr2 241310730 241310812 -9377042 + AluJb SINE Alu 205 287 -25 931 471 53 0 chr2 241310812 241311075 -9376779 - AluJo SINE Alu -31 281 5 1316 201 97 15 chr2 241311241 241311509 -9376345 + AluJo SINE Alu 1 290 -22 2300 117 0 0 chr2 241311511 241311810 -9376044 + AluSx SINE Alu 1 299 -13 1764 155 36 4 chr2 241312160 241312438 -9375416 - AluJb SINE Alu -24 288 2 242 265 121 45 chr2 241312522 241312654 -9375200 + MER5A DNA MER1_type 17 158 -31 26 0 0 0 chr2 241312748 241312774 -9375080 + AT_rich Low_complexity Low_complexity 1 26 0 1815 162 28 0 chr2 241313752 241314042 -9373812 - AluSx SINE Alu -6 306 9 2674 33 0 0 chr2 241314210 241314512 -9373342 - AluY SINE Alu -9 302 1 2104 115 16 0 chr2 241314753 241315057 -9372797 - AluSp SINE Alu -4 309 1 2294 103 0 3 chr2 241315057 241315357 -9372497 - AluSq SINE Alu -14 299 1 1402 188 57 40 chr2 241315712 241315852 -9372002 + AluJb SINE Alu 1 137 -175 2056 120 0 7 chr2 241315852 241316163 -9371691 + AluSx SINE Alu 5 313 0 1402 188 57 40 chr2 241316163 241316319 -9371535 + AluJb SINE Alu 137 303 -9 2327 103 0 0 chr2 241316990 241317290 -9370564 - AluSx SINE Alu -12 300 1 22 0 0 0 chr2 241317302 241317324 -9370530 + AT_rich Low_complexity Low_complexity 1 22 0 1788 161 11 3 chr2 241317324 241317610 -9370244 - AluJb SINE Alu -22 290 3 1205 196 94 25 chr2 241317906 241318181 -9369673 + AluJo SINE Alu 1 294 -18 1964 137 3 7 chr2 241318192 241318491 -9369363 + AluSx SINE Alu 1 298 -14 201 274 268 39 chr2 241318492 241318645 -9369209 + MIR SINE MIR 74 261 -1 1170 175 116 95 chr2 241318706 241318882 -9368972 - AluJo SINE Alu -9 293 107 2296 99 0 0 chr2 241318882 241319175 -9368679 + AluSg SINE Alu 1 293 -17 1170 175 116 95 chr2 241319175 241319283 -9368571 - AluJo SINE Alu -195 107 3 2310 82 0 0 chr2 241319305 241319612 -9368242 - AluY SINE Alu 0 307 1 741 172 9 9 chr2 241319622 241319738 -9368116 - FLAM_C SINE Alu -22 121 6 378 345 92 0 chr2 241319816 241319958 -9367896 - L2 LINE L2 -11 3261 3107 2350 97 0 6 chr2 241320043 241320354 -9367500 - AluSq SINE Alu -4 309 1 854 170 71 71 chr2 241320443 241320667 -9367187 - AluJb SINE Alu -2 310 87 3922 204 116 29 chr2 241320706 241321056 -9366798 - Charlie1 DNA MER1_type -12 2749 2431 204 40 0 0 chr2 241321056 241321081 -9366773 + (TA)n Simple_repeat Simple_repeat 1 25 0 3922 204 116 29 chr2 241321081 241321950 -9365904 - Charlie1 DNA MER1_type -330 2431 1424 232 260 234 0 chr2 241322031 241322108 -9365746 - Charlie1 DNA MER1_type -2666 95 1 589 202 0 47 chr2 241322286 241322415 -9365439 + MER3 DNA MER1_type 14 136 -73 1956 150 0 7 chr2 241322431 241322731 -9365123 - AluSx SINE Alu -14 298 1 2343 153 149 2 chr2 241322756 241323272 -9364582 - L1MC3 LINE L1 0 7785 7194 2506 71 0 6 chr2 241323293 241323604 -9364250 - AluY SINE Alu -2 309 1 341 191 56 45 chr2 241323604 241323693 -9364161 + MER3 DNA MER1_type 119 208 -1 1367 229 44 47 chr2 241323875 241324147 -9363707 - L1ME2 LINE L1 -11 6153 5881 2245 82 85 32 chr2 241324147 241324488 -9363366 - L1PA13 LINE L1 0 6163 5805 1367 229 44 47 chr2 241324488 241324665 -9363189 - L1ME2 LINE L1 -283 5881 5705 2090 122 3 16 chr2 241325724 241326036 -9361818 - AluSx SINE Alu -4 308 1 185 0 40 0 chr2 241326038 241326063 -9361791 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1906 140 0 27 chr2 241326167 241326467 -9361387 - AluJb SINE Alu -20 292 1 862 228 0 6 chr2 241326518 241326676 -9361178 + FRAM SINE Alu 1 156 -20 1518 243 58 74 chr2 241326682 241326903 -9360951 - L1ME3 LINE L1 -5 6157 5934 2553 157 48 2 chr2 241326903 241327316 -9360538 - MSTB1 LTR MaLR 0 432 1 1518 243 58 74 chr2 241327316 241327431 -9360423 - L1ME3 LINE L1 -228 5934 5819 1959 134 3 37 chr2 241327431 241327752 -9360102 - AluSx SINE Alu -2 310 1 1518 243 58 74 chr2 241327752 241328036 -9359818 - L1ME3 LINE L1 -343 5819 5546 1095 102 48 24 chr2 241328350 241328517 -9359337 - AluSg/x SINE Alu -16 296 126 4805 60 11 58 chr2 241329265 241329917 -9357937 - L1PA6 LINE L1 -3 6151 5531 180 0 0 0 chr2 241329917 241329937 -9357917 + (TA)n Simple_repeat Simple_repeat 2 21 0 204 102 102 41 chr2 241331799 241331848 -9356006 + CT-rich Low_complexity Low_complexity 1 52 0 1746 184 10 3 chr2 241331849 241332154 -9355700 - AluJb SINE Alu -5 307 1 2255 112 0 0 chr2 241333195 241333489 -9354365 + AluSx SINE Alu 1 294 -18 2893 7 0 0 chr2 241333489 241333798 -9354056 + AluYa5 SINE Alu 1 309 -2 1035 248 40 61 chr2 241334620 241335016 -9352838 - HsTC2 DNA Tc2 -3 1895 1332 453 245 165 25 chr2 241335152 241335480 -9352374 - HsTC2 DNA Tc2 -1423 475 30 1879 138 40 17 chr2 241335503 241335800 -9352054 - AluJb SINE Alu -7 305 2 2471 63 0 7 chr2 241335846 241336148 -9351706 + AluY SINE Alu 1 300 -11 202 265 142 44 chr2 241337756 241337960 -9349894 + L2 LINE L2 994 1217 -2097 2080 137 70 25 chr2 241337960 241338319 -9349535 - THE1C LTR MaLR 0 375 1 1085 176 112 0 chr2 241338343 241338593 -9349261 + L1MD3 LINE L1 7718 7995 0 647 179 36 0 chr2 241338779 241338891 -9348963 - FLAM_C SINE Alu -10 133 18 21 36 0 0 chr2 241339080 241339108 -9348746 + AT_rich Low_complexity Low_complexity 1 28 0 2360 88 7 3 chr2 241339210 241339518 -9348336 - AluSg SINE Alu -1 309 1 2290 78 13 16 chr2 241339518 241339824 -9348030 - AluSp SINE Alu -8 305 1 1952 117 3 55 chr2 241339838 241340147 -9347707 - AluSx SINE Alu -19 293 1 421 296 80 15 chr2 241340147 241340346 -9347508 + L2 LINE L2 1765 1976 -1338 1634 175 24 17 chr2 241340346 241340643 -9347211 - AluJo SINE Alu -13 299 1 240 268 85 0 chr2 241340704 241340786 -9347068 - L1ME4a LINE L1 -52 6069 5981 25 0 0 0 chr2 241340801 241340826 -9347028 + AT_rich Low_complexity Low_complexity 1 25 0 491 201 170 38 chr2 241341247 241341406 -9346448 + MIR SINE MIR 83 262 0 1972 132 3 32 chr2 241341868 241342179 -9345675 + AluSx SINE Alu 1 302 -10 766 176 15 22 chr2 241342256 241342392 -9345462 + FLAM_A SINE Alu 7 141 -1 22 0 0 0 chr2 241342464 241342486 -9345368 + AT_rich Low_complexity Low_complexity 1 22 0 1815 172 52 9 chr2 241342874 241343200 -9344654 + MER2 DNA MER2_type 1 340 -5 37 0 0 0 chr2 241343324 241343361 -9344493 + AT_rich Low_complexity Low_complexity 1 37 0 623 155 0 19 chr2 241343362 241343465 -9344389 - FLAM_C SINE Alu -5 138 38 1319 202 80 17 chr2 241343472 241343759 -9344095 - AluJo SINE Alu -5 307 3 514 134 0 72 chr2 241343804 241343901 -9343953 + FLAM_A SINE Alu 37 126 -16 193 274 57 57 chr2 241344062 241344168 -9343686 + L2 LINE L2 2739 2844 -470 619 256 112 26 chr2 241345594 241345941 -9341913 - L1ME4a LINE L1 -92 6029 5653 801 206 155 16 chr2 241346239 241346433 -9341421 + MER58A DNA MER1_type 4 224 0 2358 94 0 13 chr2 241347160 241347469 -9340385 - AluSx SINE Alu -7 305 1 815 198 97 88 chr2 241347625 241347933 -9339921 + L2 LINE L2 3003 3313 0 431 275 50 10 chr2 241347935 241348135 -9339719 - L1ME LINE L1 -365 5756 5549 2042 109 4 0 chr2 241348329 241348595 -9339259 + AluSq SINE Alu 1 267 -46 1504 194 26 20 chr2 241348644 241348948 -9338906 + AluJb SINE Alu 1 306 -6 1987 116 0 60 chr2 241349070 241349372 -9338482 + AluSx SINE Alu 1 284 -28 805 181 8 8 chr2 241349429 241349562 -9338292 + FLAM_A SINE Alu 1 133 0 822 320 94 37 chr2 241349919 241350241 -9337613 + L2 LINE L2 2305 2660 -654 2061 159 0 3 chr2 241350241 241350550 -9337304 - AluSx SINE Alu -4 308 1 822 320 94 37 chr2 241350550 241350664 -9337190 + L2 LINE L2 2660 2766 -548 241 268 12 24 chr2 241350753 241350835 -9337019 + CT-rich Low_complexity Low_complexity 4 84 0 2057 116 0 34 chr2 241351065 241351380 -9336474 + AluSx SINE Alu 1 305 0 278 356 77 34 chr2 241351408 241351706 -9336148 - L2 LINE L2 -672 2642 2332 229 305 42 21 chr2 241351800 241351895 -9335959 + Tigger8 DNA MER2_type 41 137 -529 1305 116 63 10 chr2 241352225 241352432 -9335422 - L1PA14 LINE L1 -2 6159 5942 1827 172 7 3 chr2 241352649 241352952 -9334902 - AluJb SINE Alu -8 304 1 399 290 90 15 chr2 241352999 241353199 -9334655 + L3 LINE CR1 1106 1320 -257 1786 167 30 7 chr2 241353334 241353639 -9334215 - AluJb SINE Alu 0 312 1 181 259 348 9 chr2 241353665 241353777 -9334077 + MIR SINE MIR 47 196 -66 2142 219 86 53 chr2 241354038 241354774 -9333080 + L1MC5 LINE L1 6670 7429 -532 932 172 0 0 chr2 241354782 241354927 -9332927 + AluJo SINE Alu 1 145 -167 27 0 0 0 chr2 241355398 241355425 -9332429 + AT_rich Low_complexity Low_complexity 1 27 0 584 311 5 0 chr2 241355933 241356115 -9331739 - L1MC/D LINE L1 -575 5587 5425 1972 138 0 7 chr2 241357100 241357389 -9330465 - AluSx SINE Alu -21 291 5 237 33 0 0 chr2 241358304 241358334 -9329520 + (TG)n Simple_repeat Simple_repeat 1 30 0 2078 109 11 0 chr2 241358712 241358988 -9328866 + AluSx SINE Alu 1 279 -33 392 235 111 39 chr2 241359424 241359577 -9328277 - L1MC/D LINE L1 -690 5431 5268 369 43 0 0 chr2 241359583 241359630 -9328224 + (TG)n Simple_repeat Simple_repeat 2 48 0 298 192 0 0 chr2 241359652 241359704 -9328150 - Alu SINE Alu -9 293 242 1674 186 11 0 chr2 241359704 241359978 -9327876 - AluJo SINE Alu -35 277 1 2018 147 0 6 chr2 241360054 241360368 -9327486 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 241360454 241360479 -9327375 + AT_rich Low_complexity Low_complexity 1 25 0 2501 61 0 0 chr2 241361398 241361691 -9326163 - AluY SINE Alu -18 293 1 397 0 0 0 chr2 241361949 241361993 -9325861 + (TTTA)n Simple_repeat Simple_repeat 3 156 0 2139 117 0 0 chr2 241361993 241362275 -9325579 - AluSx SINE Alu -1 325 1 895 144 0 0 chr2 241362277 241362409 -9325445 - AluSq/x SINE Alu -179 133 2 559 243 188 30 chr2 241362453 241362655 -9325199 - MIR SINE MIR -21 241 8 2317 105 0 0 chr2 241362735 241363041 -9324813 + AluY SINE Alu 1 306 -5 449 266 164 23 chr2 241363055 241363318 -9324536 - L1MC/D LINE L1 -1988 5820 5521 2263 100 3 0 chr2 241364020 241364319 -9323535 - AluSg SINE Alu -10 300 1 315 122 0 0 chr2 241365014 241365063 -9322791 + (T)n Simple_repeat Simple_repeat 1 49 0 213 287 0 19 chr2 241366269 241366339 -9321515 + MER5B DNA MER1_type 91 170 -19 285 193 255 55 chr2 241368534 241368679 -9319175 - L1ME LINE L1 -413 5708 5535 344 235 162 20 chr2 241369788 241369992 -9317862 + L1ME4a LINE L1 5672 5904 -217 21 0 0 0 chr2 241370001 241370022 -9317832 + AT_rich Low_complexity Low_complexity 1 21 0 29 78 0 0 chr2 241370812 241370876 -9316978 + AT_rich Low_complexity Low_complexity 1 64 0 2274 106 0 34 chr2 241371075 241371395 -9316459 - AluSg SINE Alu 0 310 2 1487 148 111 30 chr2 241371607 241371877 -9315977 + AluJb SINE Alu 1 292 -20 1750 130 60 39 chr2 241372168 241372388 -9315466 - MER44D DNA MER2_type -1883 608 394 2009 118 0 23 chr2 241372388 241372692 -9315162 + AluSx SINE Alu 1 297 -15 1750 130 60 39 chr2 241372692 241372802 -9315052 - MER44D DNA MER2_type -2097 394 1 190 213 85 21 chr2 241372823 241372870 -9314984 - L2 LINE L2 0 3313 3264 787 296 120 58 chr2 241372884 241373611 -9314243 + L3 LINE CR1 666 1437 -140 229 261 87 14 chr2 241375926 241375995 -9311859 - MIR3 SINE MIR -11 197 124 2003 104 90 0 chr2 241378094 241378373 -9309481 + AluSx SINE Alu 1 304 -8 772 225 197 34 chr2 241378520 241378956 -9308898 - Charlie4a DNA MER1_type -1 507 1 191 291 47 58 chr2 241378968 241379054 -9308800 - MIR SINE MIR -104 104 20 208 0 62 0 chr2 241379693 241379725 -9308129 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 1523 145 53 53 chr2 241381196 241381499 -9306355 + 7SLRNA srpRNA srpRNA 2 304 -16 2157 85 4 0 chr2 241381638 241381908 -9305946 - AluSq SINE Alu -10 303 33 2369 110 3 0 chr2 241381908 241382215 -9305639 - AluSq SINE Alu -4 309 1 1195 134 0 0 chr2 241383006 241383185 -9304669 + AluY SINE Alu 122 300 -11 304 213 194 9 chr2 241383829 241383937 -9303917 + MIR SINE MIR 116 243 -19 198 268 0 0 chr2 241383970 241384011 -9303843 + MIR SINE MIR 162 202 -60 2153 116 10 0 chr2 241384343 241384637 -9303217 - AluSq SINE Alu -16 297 1 2221 105 3 0 chr2 241384639 241384934 -9302920 - AluSx SINE Alu -16 296 1 2436 87 0 0 chr2 241385269 241385579 -9302275 + AluSx SINE Alu 1 310 -2 240 111 0 0 chr2 241385743 241385779 -9302075 + (T)n Simple_repeat Simple_repeat 1 36 0 562 96 0 0 chr2 241386156 241386229 -9301625 - AluJo SINE Alu -24 288 216 * 679 200 7 41 chr2 241386226 241386371 -9301483 - AluJo SINE Alu -170 142 3 345 243 81 22 chr2 241387438 241387574 -9300280 - MIR SINE MIR -38 224 81 201 329 27 0 chr2 241387831 241387904 -9299950 - MIR SINE MIR 0 262 188 814 103 0 26 chr2 241387977 241388093 -9299761 + FLAM_C SINE Alu 29 141 -2 280 279 139 8 chr2 241388115 241388161 -9299693 - MIR SINE MIR -101 161 122 807 183 0 0 chr2 241388161 241388292 -9299562 + FLAM_C SINE Alu 3 133 0 280 279 139 8 chr2 241388292 241388367 -9299487 - MIR SINE MIR -140 122 24 250 357 63 14 chr2 241389362 241389505 -9298349 + MIR3 SINE MIR 5 154 -54 21 0 0 0 chr2 241391789 241391810 -9296044 + AT_rich Low_complexity Low_complexity 1 21 0 1582 181 38 0 chr2 241392102 241392395 -9295459 - AluJo SINE Alu -8 304 1 391 198 114 78 chr2 241392717 241392884 -9294970 - LTR48 LTR ERV1 0 787 615 285 242 61 10 chr2 241392911 241393010 -9294844 - LTR48 LTR ERV1 -303 484 381 294 191 322 0 chr2 241393044 241393159 -9294695 - LTR48 LTR ERV1 -479 308 157 242 344 0 10 chr2 241393146 241393242 -9294612 - MER34 LTR ERV1 -447 95 1 * 23 0 0 0 chr2 241394420 241394443 -9293411 + AT_rich Low_complexity Low_complexity 1 23 0 189 111 56 28 chr2 241395044 241395080 -9292774 - L3 LINE CR1 -26 1551 1515 29 0 0 62 chr2 241395087 241395111 -9292743 + AT_rich Low_complexity Low_complexity 1 22 -23 2216 118 0 3 chr2 241395111 241395417 -9292437 - AluSx SINE Alu -6 306 2 29 0 0 62 chr2 241395417 241395440 -9292414 + AT_rich Low_complexity Low_complexity 22 45 0 369 0 0 0 chr2 241395447 241395488 -9292366 + (CA)n Simple_repeat Simple_repeat 2 42 0 275 283 98 59 chr2 241395981 241396171 -9291683 + MIR SINE MIR 19 212 -50 31 44 0 0 chr2 241396365 241396410 -9291444 + AT_rich Low_complexity Low_complexity 1 45 0 862 137 0 0 chr2 241396411 241396528 -9291326 - AluJb SINE Alu -195 117 1 685 231 67 152 chr2 241396530 241396830 -9291024 + L1ME3A LINE L1 5555 5849 -313 532 43 43 0 chr2 241396830 241396900 -9290954 + U6 snRNA snRNA 1 73 -34 685 231 67 152 chr2 241396900 241397161 -9290693 + L1ME3A LINE L1 5849 6131 -31 198 194 0 0 chr2 241397510 241397582 -9290272 + T-rich Low_complexity Low_complexity 1 72 0 187 91 61 0 chr2 241397620 241397653 -9290201 + MIR3 SINE MIR 120 154 -54 2296 74 7 10 chr2 241397850 241398149 -9289705 - AluSp SINE Alu -15 298 1 628 177 0 102 chr2 241398385 241398532 -9289322 + AluJo SINE Alu 43 174 -138 2460 75 10 0 chr2 241398544 241398849 -9289005 - AluY SINE Alu -3 308 1 1735 144 152 39 chr2 241398948 241399329 -9288525 + MSTB LTR MaLR 1 424 -2 1011 212 214 17 chr2 241399412 241399757 -9288097 - MLT1F1 LTR MaLR -41 526 114 2150 100 7 3 chr2 241400417 241400707 -9287147 - AluSg SINE Alu -19 291 1 24 53 0 0 chr2 241401090 241401128 -9286726 + AT_rich Low_complexity Low_complexity 1 38 0 229 324 138 35 chr2 241404185 241404330 -9283524 + MIR3 SINE MIR 45 204 -4 201 309 78 74 chr2 241406208 241406425 -9281429 + L2 LINE L2 2760 2977 -337 713 158 0 60 chr2 241406628 241406761 -9281093 + FLAM_A SINE Alu 2 126 -7 498 176 0 12 chr2 241406774 241406859 -9280995 - FLAM_A SINE Alu -27 115 32 419 317 159 44 chr2 241407523 241408245 -9279609 - L2 LINE L2 -780 2534 1730 662 201 0 30 chr2 241409786 241409920 -9277934 + FLAM_A SINE Alu 1 130 -3 386 318 61 7 chr2 241409949 241410097 -9277757 + MIR SINE MIR 28 183 -79 979 151 39 53 chr2 241410524 241410730 -9277124 - MER46A DNA MER2_type -32 204 2 454 178 99 59 chr2 241410598 241410750 -9277104 + MER46A DNA MER2_type 4 161 -75 * 2136 97 14 7 chr2 241410751 241411040 -9276814 + AluSx SINE Alu 1 291 -21 369 0 0 0 chr2 241411662 241411703 -9276151 + (TG)n Simple_repeat Simple_repeat 2 42 0 4672 153 21 35 chr2 241411713 241411876 -9275978 - L1MD1 LINE L1 -16 6620 6456 2005 159 3 0 chr2 241411876 241412172 -9275682 + AluSx SINE Alu 1 297 -15 4672 153 21 35 chr2 241412172 241412954 -9274900 - L1MD1 LINE L1 -180 6456 5688 1873 138 108 75 chr2 241412971 241413426 -9274428 - L1MB2 LINE L1 -2 6169 5700 1043 137 0 62 chr2 241413426 241413637 -9274217 + AluJo SINE Alu 1 198 -114 973 128 7 13 chr2 241413888 241414037 -9273817 + FRAM SINE Alu 1 146 -30 252 0 0 0 chr2 241414040 241414068 -9273786 + (TAA)n Simple_repeat Simple_repeat 2 29 0 2714 183 28 9 chr2 241414068 241415048 -9272806 - L1MB2 LINE L1 -476 5707 4708 929 197 75 0 chr2 241415048 241415236 -9272618 - AluJo SINE Alu -7 305 104 685 182 0 0 chr2 241415244 241415354 -9272500 + AluJo/FLAM SINE Alu 8 117 -195 1243 180 25 114 chr2 241415357 241415674 -9272180 - AluSx SINE Alu -23 289 1 23 33 0 0 chr2 241415674 241415704 -9272150 + AT_rich Low_complexity Low_complexity 1 30 0 1752 138 76 0 chr2 241415715 241415991 -9271863 + AluJb SINE Alu 1 297 -15 687 140 134 32 chr2 241416002 241416188 -9271666 - L1MA8 LINE L1 -29 6262 6058 4101 203 51 36 chr2 241416208 241417367 -9270487 - L1MB2 LINE L1 -1458 4688 3509 2127 109 31 0 chr2 241417367 241417660 -9270194 - AluSx SINE Alu -10 302 1 4101 203 51 36 chr2 241417660 241417687 -9270167 - L1MB2 LINE L1 -2637 3509 3484 1607 251 40 45 chr2 241417683 241418507 -9269347 - L1MD1 LINE L1 -879 5661 4842 * 2217 110 0 3 chr2 241418664 241418954 -9268900 - AluSx SINE Alu -23 289 1 1252 253 83 24 chr2 241418954 241419135 -9268719 - L1MD1 LINE L1 -3191 3349 3180 804 97 0 0 chr2 241419135 241419249 -9268605 - L1PB1 LINE L1 0 6151 6038 1252 253 83 24 chr2 241419249 241419776 -9268078 - L1MD1 LINE L1 -3360 3180 2599 1127 158 77 32 chr2 241419771 241420017 -9267837 - L1MD1 LINE L1 -6280 260 4 * 231 292 111 0 chr2 241420018 241420090 -9267764 + L2 LINE L2 3234 3313 0 332 349 42 30 chr2 241421057 241421223 -9266631 + L2 LINE L2 2738 2905 -409 1233 176 73 80 chr2 241421400 241421701 -9266153 + AluJo SINE Alu 1 299 -13 805 158 8 15 chr2 241421899 241422032 -9265822 - FLAM_C SINE Alu -1 132 1 235 321 62 0 chr2 241422077 241422158 -9265696 - L2 LINE L2 0 3272 3187 304 238 48 19 chr2 241422201 241422306 -9265548 + MER112 DNA MER1_type 153 260 0 255 125 0 0 chr2 241423077 241423117 -9264737 + (TA)n Simple_repeat Simple_repeat 1 40 0 2166 115 0 0 chr2 241423117 241423404 -9264450 - AluSg SINE Alu -23 287 1 1954 138 3 0 chr2 241424141 241424448 -9263406 - AluSx SINE Alu 0 308 1 733 262 23 28 chr2 241424705 241424919 -9262935 + MER58A DNA MER1_type 1 213 -11 21 36 0 0 chr2 241425645 241425673 -9262181 + AT_rich Low_complexity Low_complexity 1 28 0 289 265 81 62 chr2 241426042 241426218 -9261636 - MIR SINE MIR -62 146 18 1012 173 31 0 chr2 241427015 241427177 -9260677 + FRAM SINE Alu 1 166 -10 1993 124 9 62 chr2 241427345 241427668 -9260186 - AluSx SINE Alu -6 306 1 1253 154 60 118 chr2 241427949 241428043 -9259811 + MER46B DNA MER2_type 1 99 -2632 2154 122 10 0 chr2 241428043 241428347 -9259507 - AluSq SINE Alu -6 307 1 1253 154 60 118 chr2 241428347 241428442 -9259412 + MER46B DNA MER2_type 99 36 -2695 2256 77 0 7 chr2 241428442 241428727 -9259127 + AluSg SINE Alu 1 283 -27 1253 154 60 118 chr2 241428727 241428919 -9258935 + MER46B DNA MER2_type 35 236 0 584 93 93 10 chr2 241429277 241429374 -9258480 - L1MB5 LINE L1 -8 6166 6062 431 253 56 43 chr2 241429416 241429578 -9258276 + MIR SINE MIR 31 194 -68 578 86 35 60 chr2 241430803 241430919 -9256935 - L1MB3 LINE L1 -335 5848 5736 3527 175 53 36 chr2 241431540 241432362 -9255492 - L1MB3 LINE L1 -7 6176 5341 1009 153 10 25 chr2 241432589 241432792 -9255062 - L1MB3 LINE L1 -1150 4996 4797 351 96 0 0 chr2 241432793 241432845 -9255009 - Alu SINE Alu -2 298 247 339 280 64 41 chr2 241432866 241433084 -9254770 - L1ME4a LINE L1 -223 5898 5676 203 179 0 0 chr2 241433123 241433162 -9254692 + T-rich Low_complexity Low_complexity 1 39 0 238 267 40 0 chr2 241433356 241433431 -9254423 - MER103 DNA DNA -49 117 40 2398 90 3 0 chr2 241434474 241434775 -9253079 - AluY SINE Alu -9 302 1 777 181 79 0 chr2 241434802 241434979 -9252875 - L1 LINE L1 -1159 4987 4797 1813 143 10 14 chr2 241434980 241435274 -9252580 - AluSx SINE Alu -2 310 18 303 202 18 149 chr2 241435274 241435337 -9252517 - L1ME4a LINE L1 -944 5202 5159 1935 143 17 0 chr2 241435337 241435351 -9252503 - AluSx SINE Alu -14 298 286 195 100 0 0 chr2 241435351 241435381 -9252473 + (CTTA)n Simple_repeat Simple_repeat 2 31 0 1935 143 17 0 chr2 241435381 241435659 -9252195 - AluSx SINE Alu -26 286 1 303 202 18 149 chr2 241435659 241435709 -9252145 - L1ME4a LINE L1 -987 5159 5104 2208 236 121 76 chr2 241435733 241436562 -9251292 - L1ME LINE L1 -876 6081 5291 2097 94 11 0 chr2 241436562 241436839 -9251015 + AluSg SINE Alu 1 280 -30 2208 236 121 76 chr2 241436839 241437517 -9250337 - L1ME LINE L1 -1666 5291 4492 1483 190 50 10 chr2 241437517 241437817 -9250037 - AluJo SINE Alu 0 312 1 2208 236 121 76 chr2 241437817 241437947 -9249907 - L1ME LINE L1 -2465 4492 4369 12189 109 28 12 chr2 241437949 241439880 -9247974 + Tigger1 DNA MER2_type 2 1963 -455 6248 35 5 2 chr2 241439888 241440677 -9247177 - L1PA6 LINE L1 -21 6133 5343 1340 67 43 5 chr2 241440677 241440887 -9246967 + L1PA6 LINE L1 5119 5336 -810 1532 107 46 11 chr2 241440887 241441150 -9246704 + Tigger1 DNA MER2_type 1948 2219 -199 1441 84 10 0 chr2 241441143 241441345 -9246509 + Tigger1 DNA MER2_type 961 1164 -1254 * 901 185 28 6 chr2 241441355 241441533 -9246321 + Tigger1 DNA MER2_type 2237 2418 0 1261 254 160 15 chr2 241441533 241442143 -9245711 - L1ME LINE L1 -2588 4369 3627 1851 180 10 3 chr2 241442143 241442448 -9245406 - AluJb SINE Alu -5 307 1 1261 254 160 15 chr2 241442448 241442592 -9245262 - L1ME LINE L1 -3330 3627 3505 231 36 0 0 chr2 241442605 241442633 -9245221 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 955 207 0 17 chr2 241442639 241442813 -9245041 - AluJo SINE Alu -37 275 105 602 118 0 32 chr2 241442814 241442907 -9244947 + HY4 scRNA scRNA 1 90 -3 754 183 0 0 chr2 241442947 241443067 -9244787 - AluJo SINE Alu -192 120 1 785 220 43 112 chr2 241443070 241443515 -9244339 - L1ME LINE L1 -3446 3511 3098 324 251 78 98 chr2 241443521 241443856 -9243998 - L1ME LINE L1 -5401 1546 1219 1519 199 13 16 chr2 241444133 241444444 -9243410 - AluJo SINE Alu -2 310 1 1222 157 0 129 chr2 241444615 241444862 -9242992 - L1MC3 LINE L1 -17 7768 7573 725 181 8 0 chr2 241444862 241444989 -9242865 + FLAM_A SINE Alu 1 128 -5 1222 157 0 129 chr2 241444989 241445073 -9242781 - L1MC3 LINE L1 -212 7573 7480 1625 178 55 14 chr2 241445386 241445504 -9242350 + AluJb SINE Alu 1 113 -199 1041 82 0 0 chr2 241445504 241445662 -9242192 + (TA)n Simple_repeat Simple_repeat 1 158 0 1625 178 55 14 chr2 241445662 241445835 -9242019 + AluJb SINE Alu 113 304 -8 2599 258 82 21 chr2 241445837 241446705 -9241149 - L1ME LINE L1 -5831 1028 108 1811 124 14 18 chr2 241446705 241446988 -9240866 - AluSx SINE Alu -15 297 16 1171 145 43 99 chr2 241447114 241447418 -9240436 - L1MC3 LINE L1 -377 7408 7122 223 261 85 92 chr2 241447520 241447650 -9240204 - L2 LINE L2 -1 3271 3143 319 338 36 18 chr2 241447677 241447899 -9239955 - MLT1L LTR MaLR -8 607 382 24 32 0 0 chr2 241448947 241448978 -9238876 + AT_rich Low_complexity Low_complexity 1 31 0 192 77 0 0 chr2 241449187 241449213 -9238641 + (CAG)n Simple_repeat Simple_repeat 3 28 0 29 0 0 0 chr2 241449325 241449354 -9238500 + AT_rich Low_complexity Low_complexity 1 29 0 1202 161 0 32 chr2 241449354 241449572 -9238282 - AluJb SINE Alu -17 295 85 579 180 164 8 chr2 241450433 241450561 -9237293 + MER5A DNA MER1_type 42 189 0 221 304 0 18 chr2 241450561 241450617 -9237237 - L2 LINE L2 -206 3066 3012 1913 207 80 45 chr2 241450621 241450985 -9236869 - L1ME LINE L1 -4833 2022 1672 2144 162 35 8 chr2 241450985 241451387 -9236467 - L1PB4 LINE L1 -1 6155 5743 1913 207 80 45 chr2 241451387 241451988 -9235866 - L1ME LINE L1 -5183 1672 1039 387 143 14 0 chr2 241451993 241452063 -9235791 + MER75 DNA T2_type 1 71 -443 383 197 0 0 chr2 241452193 241452264 -9235590 - MER75 DNA T2_type -443 71 1 1830 162 48 0 chr2 241452278 241452394 -9235460 + AluJb SINE Alu 1 110 -202 540 120 0 0 chr2 241452394 241452494 -9235360 + (TA)n Simple_repeat Simple_repeat 1 100 0 1830 162 48 0 chr2 241452494 241452667 -9235187 + AluJb SINE Alu 110 304 -8 1106 277 19 7 chr2 241452669 241452976 -9234878 - L1ME LINE L1 -5831 1028 718 253 252 117 29 chr2 241453177 241453280 -9234574 - L1ME LINE L1 -6742 117 6 239 246 117 29 chr2 241453420 241453591 -9234263 + L3 LINE CR1 1097 1282 -295 347 195 24 0 chr2 241453669 241453751 -9234103 + (TATATG)n Simple_repeat Simple_repeat 3 86 0 264 233 185 28 chr2 241453967 241454116 -9233738 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr2 241454492 241454520 -9233334 + AT_rich Low_complexity Low_complexity 1 28 0 279 0 0 0 chr2 241455950 241455981 -9231873 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 459 265 125 68 chr2 241455981 241456302 -9231552 - L2 LINE L2 -13 3300 2962 2187 95 0 58 chr2 241456713 241457039 -9230815 - AluSx SINE Alu -5 307 1 405 262 47 9 chr2 241457242 241457349 -9230505 - HAL1 LINE L1 -1250 1257 1147 930 165 11 51 chr2 241457384 241457560 -9230294 - AluJo SINE Alu -139 173 5 889 191 0 7 chr2 241457633 241457780 -9230074 - FRAM SINE Alu -30 146 1 667 254 127 49 chr2 241457828 241458558 -9229296 - HAL1 LINE L1 -1451 1056 98 441 0 0 0 chr2 241458558 241458607 -9229247 + (TG)n Simple_repeat Simple_repeat 2 50 0 2396 79 0 16 chr2 241458702 241459006 -9228848 + AluSg SINE Alu 1 299 -11 511 138 0 6 chr2 241459016 241459270 -9228584 + AluSx SINE Alu 1 299 -11 201 74 0 0 chr2 241459506 241459533 -9228321 + (CAG)n Simple_repeat Simple_repeat 1 27 0 225 65 0 0 chr2 241459624 241459655 -9228199 + (CAG)n Simple_repeat Simple_repeat 2 32 0 208 286 0 0 chr2 241460206 241460255 -9227599 + MIR SINE MIR 206 254 -8 984 220 66 12 chr2 241460450 241460691 -9227163 + MIR SINE MIR 2 255 -7 468 237 125 20 chr2 241460759 241460911 -9226943 - MIR SINE MIR -14 248 81 313 292 240 21 chr2 241461301 241461589 -9226265 + L3 LINE CR1 691 1041 -536 340 324 184 40 chr2 241461644 241461971 -9225883 + L3 LINE CR1 1197 1570 -7 693 283 30 67 chr2 241462064 241462333 -9225521 - MIR SINE MIR 0 262 4 186 279 15 44 chr2 241462402 241462470 -9225384 + L2 LINE L2 3240 3305 -8 276 176 0 0 chr2 241462928 241462996 -9224858 + (CAG)n Simple_repeat Simple_repeat 2 69 0 3261 184 12 30 chr2 241463417 241463788 -9224066 + MER82 DNA MER2_type 5 362 -291 2146 115 11 0 chr2 241463788 241464075 -9223779 + AluSg SINE Alu 11 300 -10 3261 184 12 30 chr2 241464075 241464345 -9223509 + MER82 DNA MER2_type 362 635 -18 2199 110 0 3 chr2 241464597 241464888 -9222966 - AluSg SINE Alu -20 290 1 235 215 131 54 chr2 241466247 241466377 -9221477 - MIR SINE MIR -44 218 79 1278 171 103 4 chr2 241466480 241466714 -9221140 + AluJo SINE Alu 1 257 -55 2319 114 7 0 chr2 241466838 241467144 -9220710 - AluSx SINE Alu -4 308 1 252 291 197 17 chr2 241467249 241467538 -9220316 - L2 LINE L2 -669 2645 2305 2259 94 3 10 chr2 241467688 241467985 -9219869 + AluSx SINE Alu 1 295 -17 37 23 0 0 chr2 241467985 241468029 -9219825 + AT_rich Low_complexity Low_complexity 1 44 0 1595 84 14 5 chr2 241468782 241468997 -9218857 - AluSc SINE Alu -92 217 1 1864 171 0 0 chr2 241469635 241469922 -9217932 + AluJb SINE Alu 1 287 -25 183 80 0 0 chr2 241469922 241469947 -9217907 + (TA)n Simple_repeat Simple_repeat 1 25 0 1845 141 0 4 chr2 241470501 241470771 -9217083 - AluSx SINE Alu -2 310 42 2375 92 3 10 chr2 241471350 241471656 -9216198 - AluY SINE Alu -7 304 1 2066 125 3 10 chr2 241471832 241472129 -9215725 + AluSx SINE Alu 1 295 -17 212 260 0 0 chr2 241472631 241472681 -9215173 + T-rich Low_complexity Low_complexity 1 50 0 741 166 0 50 chr2 241474715 241474854 -9213000 - FLAM_A SINE Alu -1 132 1 1039 245 95 66 chr2 241474965 241475524 -9212330 - MLT1G1 LTR MaLR -19 536 5 768 182 0 0 chr2 241475588 241475720 -9212134 - FLAM_A SINE Alu -1 132 1 21 0 0 0 chr2 241475762 241475783 -9212071 + AT_rich Low_complexity Low_complexity 1 21 0 269 198 36 0 chr2 241475795 241475906 -9211948 + (TA)n Simple_repeat Simple_repeat 2 116 0 649 272 158 49 chr2 241476781 241477230 -9210624 - MLT1J LTR MaLR -13 498 1 2410 97 0 0 chr2 241477476 241477785 -9210069 - AluSx SINE Alu -1 311 3 268 217 0 0 chr2 241477993 241478053 -9209801 + MIR3 SINE MIR 106 165 -43 * 306 285 88 29 chr2 241478046 241478183 -9209671 - MER5B DNA MER1_type -31 147 3 198 0 0 0 chr2 241479002 241479024 -9208830 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 376 268 102 29 chr2 241479030 241479276 -9208578 - L1MC5 LINE L1 -40 7921 7658 387 280 134 38 chr2 241479331 241479570 -9208284 - L1MC5 LINE L1 -389 7572 7311 2653 195 140 24 chr2 241479825 241480153 -9207701 - L1MC4 LINE L1 -1 8041 7752 1872 167 7 7 chr2 241480153 241480447 -9207407 - AluJo SINE Alu -18 294 1 2653 195 140 24 chr2 241480447 241480954 -9206900 - L1MC4 LINE L1 -290 7752 7109 551 131 101 0 chr2 241480957 241481056 -9206798 - AluSx SINE Alu -11 299 191 853 129 9 0 chr2 241481056 241481172 -9206682 - AluSx SINE Alu -195 117 1 1393 225 199 7 chr2 241481237 241481690 -9206164 - L1MC4 LINE L1 -1040 7002 6463 1322 145 0 0 chr2 241482139 241482325 -9205529 - AluSg/x SINE Alu -15 295 110 270 87 0 0 chr2 241482345 241482390 -9205464 - AluSg/x SINE Alu -167 133 95 945 114 0 0 chr2 241482392 241482515 -9205339 - AluSx SINE Alu -190 123 1 457 183 67 8 chr2 241482668 241482788 -9205066 - L1MC4a LINE L1 -1327 6481 6355 678 167 128 26 chr2 241482970 241483126 -9204728 + MER45C DNA AcHobo 91 262 -691 641 335 32 14 chr2 241483150 241483431 -9204423 - HERVL LTR ERVL -3606 2048 1763 1614 143 0 0 chr2 241483594 241483818 -9204036 - AluSx SINE Alu -88 224 1 416 322 49 15 chr2 241483926 241484131 -9203723 - HERVL LTR ERVL -4304 1460 1249 262 289 50 25 chr2 241484408 241484529 -9203325 - HERVL LTR ERVL -4773 991 868 246 298 151 24 chr2 241484820 241485072 -9202782 - L2 LINE L2 -787 2527 2244 272 269 130 9 chr2 241485316 241485424 -9202430 + MER5A DNA MER1_type 65 185 -4 265 281 100 31 chr2 241486802 241486962 -9200892 + MIR SINE MIR 86 256 -6 1210 258 165 6 chr2 241489524 241490056 -9197798 - L1MC4 LINE L1 -1 8041 7425 237 311 0 0 chr2 241490295 241490356 -9197498 + MIR SINE MIR 117 177 -85 2088 104 7 14 chr2 241490466 241490755 -9197099 + AluSx SINE Alu 1 287 -25 1951 155 10 7 chr2 241491603 241491913 -9195941 - AluJo SINE Alu -1 311 1 1741 106 0 0 chr2 241492046 241492264 -9195590 + AluSx SINE Alu 1 218 -94 225 0 0 0 chr2 241493114 241493139 -9194715 + (TG)n Simple_repeat Simple_repeat 1 25 0 427 326 115 25 chr2 241493184 241493554 -9194300 - L1MC4a LINE L1 -1954 5854 5519 221 0 0 33 chr2 241493554 241493584 -9194270 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2030 101 30 4 chr2 241493589 241493857 -9193997 - AluSx SINE Alu -37 275 1 427 326 115 25 chr2 241493857 241493915 -9193939 - L1MC4a LINE L1 -2292 5516 5381 240 266 0 0 chr2 241495767 241495925 -9191929 + (TG)n Simple_repeat Simple_repeat 1 158 0 497 307 0 0 chr2 241495952 241496131 -9191723 + (TG)n Simple_repeat Simple_repeat 1 179 0 * 509 202 0 72 chr2 241496092 241496285 -9191569 + (TGAG)n Simple_repeat Simple_repeat 2 180 0 204 275 0 0 chr2 241496288 241496437 -9191417 + (TG)n Simple_repeat Simple_repeat 1 149 0 203 211 0 51 chr2 241496490 241496646 -9191208 + (TGAG)n Simple_repeat Simple_repeat 4 151 0 206 227 11 34 chr2 241496718 241496894 -9190960 + (TGAG)n Simple_repeat Simple_repeat 4 175 0 423 321 0 0 chr2 241496895 241497063 -9190791 + (TG)n Simple_repeat Simple_repeat 1 168 0 297 285 7 0 chr2 241497314 241497617 -9190237 + (CA)n Simple_repeat Simple_repeat 1 305 0 362 282 38 38 chr2 241497766 241497897 -9189957 + L2 LINE L2 3182 3312 -1 184 316 38 0 chr2 241499109 241499188 -9188666 + MIR SINE MIR 60 141 -67 24 0 0 0 chr2 241499471 241499495 -9188359 + GC_rich Low_complexity Low_complexity 1 24 0 270 333 7 7 chr2 241499511 241499655 -9188199 + (CG)n Simple_repeat Simple_repeat 1 144 0 203 367 0 0 chr2 241501792 241501871 -9185983 - L3 LINE CR1 -543 1034 956 1926 124 35 0 chr2 241504699 241504981 -9182873 - AluSx SINE Alu -20 292 1 242 157 59 20 chr2 241505875 241505926 -9181928 - AluSg/x SINE Alu -51 249 197 188 245 19 0 chr2 241506006 241506059 -9181795 - MIR SINE MIR -89 119 66 399 127 0 0 chr2 241506157 241506220 -9181634 + (CA)n Simple_repeat Simple_repeat 2 64 0 202 244 0 0 chr2 241506810 241506851 -9181003 - L2 LINE L2 -22 3250 3210 * 244 326 14 29 chr2 241506828 241506968 -9180886 - MIR3 SINE MIR -19 189 51 232 291 0 23 chr2 241507421 241507507 -9180347 + (TG)n Simple_repeat Simple_repeat 1 84 0 290 141 11 79 chr2 241509183 241509360 -9178494 + (TG)n Simple_repeat Simple_repeat 1 165 0 308 138 19 62 chr2 241509373 241509533 -9178321 + (TG)n Simple_repeat Simple_repeat 1 153 0 258 295 0 0 chr2 241511322 241511427 -9176427 + (CA)n Simple_repeat Simple_repeat 1 105 0 422 297 16 33 chr2 241511437 241511619 -9176235 + (CATG)n Simple_repeat Simple_repeat 1 179 0 261 243 0 0 chr2 241511625 241511695 -9176159 + (CA)n Simple_repeat Simple_repeat 1 70 0 218 299 116 18 chr2 241513599 241513763 -9174091 + L2 LINE L2 2297 2476 -838 299 263 145 79 chr2 241513957 241514364 -9173490 + L2 LINE L2 2830 3263 -9 311 351 71 0 chr2 241516303 241516457 -9171397 + L1MC5 LINE L1 7617 7781 -180 2517 73 0 3 chr2 241516591 241516893 -9170961 + AluSq SINE Alu 1 301 -12 2384 107 0 0 chr2 241518344 241518642 -9169212 + AluSx SINE Alu 1 298 -14 679 203 85 95 chr2 241519202 241519576 -9168278 + MLT1C LTR MaLR 6 370 -20 309 151 0 0 chr2 241519613 241519666 -9168188 + G-rich Low_complexity Low_complexity 3 55 0 3978 104 27 44 chr2 241520022 241520944 -9166910 + SVA Other Other 209 868 -520 6432 84 39 29 chr2 241520962 241521931 -9165923 + SVA Other Other 433 1411 0 286 289 118 60 chr2 241522451 241522554 -9165300 - L1ME4a LINE L1 -213 5908 5812 2190 131 0 3 chr2 241522554 241522866 -9164988 + AluSx SINE Alu 1 311 -1 286 289 118 60 chr2 241522866 241523281 -9164573 - L1ME4a LINE L1 -309 5812 5360 736 191 0 7 chr2 241523290 241523431 -9164423 - FLAM_C SINE Alu -2 141 2 207 196 0 0 chr2 241523442 241523488 -9164366 + T-rich Low_complexity Low_complexity 1 46 0 276 314 135 38 chr2 241523614 241524215 -9163639 - L1ME4a LINE L1 -1800 4346 3688 930 222 57 99 chr2 241524282 241524769 -9163085 - L1ME1 LINE L1 -4 6162 5724 619 206 63 0 chr2 241524769 241524895 -9162959 + MER20 DNA MER1_type 3 136 -83 1267 163 87 76 chr2 241524895 241525171 -9162683 - MER1B DNA MER1_type 0 339 61 385 240 78 23 chr2 241525175 241525304 -9162550 + MER20 DNA MER1_type 80 215 -4 9788 230 53 17 chr2 241525320 241528294 -9159560 - L1ME1 LINE L1 -765 5381 2549 2161 102 3 3 chr2 241528366 241528677 -9159177 + AluY SINE Alu 1 311 0 1100 186 62 0 chr2 241528771 241528981 -9158873 + MER58A DNA MER1_type 2 224 0 542 224 130 6 chr2 241528990 241529151 -9158703 - MER3 DNA MER1_type -1 208 28 1911 167 16 0 chr2 241529152 241529457 -9158397 + AluSx SINE Alu 2 311 -1 2444 96 0 0 chr2 241529464 241529766 -9158088 + AluSg SINE Alu 1 302 -8 418 252 28 42 chr2 241530127 241530270 -9157584 - MER33 DNA MER1_type -183 141 1 2244 114 10 0 chr2 241530419 241530718 -9157136 - AluSx SINE Alu -10 302 1 757 221 105 0 chr2 241530950 241531140 -9156714 - MIR SINE MIR -29 233 24 613 297 62 11 chr2 241531169 241531565 -9156289 + L1MC/D LINE L1 5217 5639 -748 1382 111 0 5 chr2 241532194 241532383 -9155471 - AluSg/x SINE Alu -10 302 115 2015 120 6 65 chr2 241532494 241532674 -9155180 - AluSx SINE Alu -6 306 117 186 43 0 0 chr2 241532674 241532697 -9155157 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2091 108 3 18 chr2 241532697 241532983 -9154871 - AluSx SINE Alu -30 282 1 2015 120 6 65 chr2 241532983 241533126 -9154728 - AluSx SINE Alu -193 119 1 2306 91 20 0 chr2 241533354 241533652 -9154202 - AluSg SINE Alu -6 304 1 243 88 0 0 chr2 241535158 241535192 -9152662 + (TCC)n Simple_repeat Simple_repeat 1 34 0 1529 159 3 96 chr2 241536170 241536503 -9151351 - AluJo SINE Alu -10 302 1 191 321 54 0 chr2 241537431 241537487 -9150367 + L2 LINE L2 3246 3304 -9 2454 94 0 0 chr2 241537512 241537839 -9150015 + AluSq SINE Alu 1 313 0 2005 121 7 0 chr2 241538178 241538450 -9149404 + AluSq SINE Alu 1 274 -39 498 273 85 18 chr2 241538451 241538518 -9149336 + MLT1L LTR MaLR 155 216 -295 1579 175 5 92 chr2 241538518 241538679 -9149175 + MLT1A1 LTR MaLR 1 175 -190 2275 100 0 0 chr2 241538679 241538959 -9148895 + AluSx SINE Alu 1 280 -32 189 0 0 0 chr2 241538963 241538984 -9148870 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1579 175 5 92 chr2 241538984 241539217 -9148637 + MLT1A1 LTR MaLR 178 365 0 498 273 85 18 chr2 241539217 241539401 -9148453 + MLT1L LTR MaLR 216 346 -165 439 207 63 9 chr2 241539410 241539521 -9148333 + MLT1L LTR MaLR 481 597 -18 180 0 0 0 chr2 241540591 241540611 -9147243 + (CCA)n Simple_repeat Simple_repeat 2 21 0 22 35 0 0 chr2 241542050 241542079 -9145775 + GC_rich Low_complexity Low_complexity 1 29 0 265 197 14 0 chr2 241542723 241542794 -9145060 + G-rich Low_complexity Low_complexity 3 74 0 35 78 0 0 chr2 241542936 241543013 -9144841 + GC_rich Low_complexity Low_complexity 1 77 0 26 0 0 0 chr2 241543498 241543524 -9144330 + GC_rich Low_complexity Low_complexity 1 26 0 265 197 14 0 chr2 241543650 241543721 -9144133 + G-rich Low_complexity Low_complexity 3 74 0 212 132 19 38 chr2 241543853 241543906 -9143948 + G-rich Low_complexity Low_complexity 2 53 0 1310 188 15 116 chr2 241545362 241545408 -9142446 - MLT1A1 LTR MaLR -2 363 314 2139 107 59 34 chr2 241545408 241545763 -9142091 + THE1B LTR MaLR 1 364 0 1310 188 15 116 chr2 241545763 241545957 -9141897 - MLT1A1 LTR MaLR -51 314 178 2132 96 0 73 chr2 241545957 241546271 -9141583 - AluSg SINE Alu -19 291 1 1310 188 15 116 chr2 241546271 241546433 -9141421 - MLT1A1 LTR MaLR -187 178 1 2067 182 2 71 chr2 241546438 241546900 -9140954 - MLT1A1-int LTR MaLR -6 1729 1300 1174 199 33 28 chr2 241547003 241547380 -9140474 + MLT1-int LTR MaLR 423 890 -481 275 239 15 0 chr2 241547436 241547503 -9140351 + MLT-int LTR MaLR 677 744 -991 * 1568 185 96 27 chr2 241547495 241547790 -9140064 - MLT1A1-int LTR MaLR -896 475 143 2367 105 0 7 chr2 241547790 241548095 -9139759 - AluSg SINE Alu -7 303 1 1568 185 96 27 chr2 241548095 241548205 -9139649 - MLT1A1-int LTR MaLR -1228 143 42 1103 195 58 72 chr2 241548218 241548452 -9139402 - MLT1A1 LTR MaLR -2 426 123 2255 100 0 17 chr2 241548452 241548782 -9139072 + AluSq SINE Alu 1 325 0 1103 195 58 72 chr2 241548782 241548904 -9138950 - MLT1A1 LTR MaLR -305 123 1 2392 103 0 3 chr2 241549592 241549902 -9137952 + AluSc SINE Alu 1 309 0 186 146 18 127 chr2 241550310 241550351 -9137503 + L2 LINE L2 3265 3300 -13 1904 172 0 16 chr2 241550351 241550665 -9137189 + AluJb SINE Alu 1 309 -3 186 146 18 127 chr2 241550665 241550678 -9137176 + L2 LINE L2 3300 3313 0 267 290 53 76 chr2 241550877 241550967 -9136887 - MIR3 SINE MIR -24 184 96 2264 127 0 0 chr2 241550967 241551267 -9136587 + AluSx SINE Alu 2 301 -11 267 290 53 76 chr2 241551267 241551307 -9136547 - MIR3 SINE MIR -112 96 57 2093 231 67 16 chr2 241551993 241552536 -9135318 + MER77 LTR ERV1 54 601 -4 2246 125 6 0 chr2 241552587 241552898 -9134956 - AluSq SINE Alu 0 313 1 187 320 107 8 chr2 241553145 241553267 -9134587 + L2 LINE L2 3088 3221 -51 785 118 7 83 chr2 241554242 241554386 -9133468 + FLAM_C SINE Alu 1 133 0 2340 90 20 0 chr2 241554529 241554830 -9133024 + AluSq SINE Alu 1 307 -6 2372 98 3 0 chr2 241555346 241555643 -9132211 + AluSx SINE Alu 1 298 -14 932 272 78 36 chr2 241555999 241556517 -9131337 + L1ME4a LINE L1 5512 6058 -63 5243 62 6 7 chr2 241556517 241557208 -9130646 - LTR8 LTR ERV1 -1 690 1 932 272 78 36 chr2 241557208 241557267 -9130587 + L1ME4a LINE L1 6058 6113 -8 1493 57 17 0 chr2 241558240 241558417 -9129437 + AluSg SINE Alu 16 195 -115 213 121 0 0 chr2 241558423 241558456 -9129398 + (A)n Simple_repeat Simple_repeat 1 33 0 195 42 0 0 chr2 241558531 241558555 -9129299 + (T)n Simple_repeat Simple_repeat 1 24 0 1561 125 0 0 chr2 241558988 241559230 -9128624 + AluSg/x SINE Alu 83 324 0 686 143 18 9 chr2 241559347 241559459 -9128395 + MER2 DNA MER2_type 2 114 -231 1234 97 0 0 chr2 241559498 241559652 -9128202 - AluSx SINE Alu -157 155 2 392 260 276 14 chr2 241559682 241559916 -9127938 - L1ME2 LINE L1 0 6164 5873 566 237 75 17 chr2 241559976 241560149 -9127705 - MER5A DNA MER1_type 0 189 7 223 277 31 15 chr2 241560662 241560727 -9127127 - L2 LINE L2 -211 3061 2996 2436 112 0 0 chr2 241560730 241561042 -9126812 + AluSx SINE Alu 1 312 0 486 224 35 91 chr2 241561139 241561282 -9126572 - MIR SINE MIR -103 159 25 587 175 17 0 chr2 241561307 241561427 -9126427 - Charlie5 DNA MER1_type 0 2621 2500 455 269 83 49 chr2 241561547 241561811 -9126043 - LTR37B LTR ERV1 -140 328 56 2315 100 0 13 chr2 241562094 241562394 -9125460 + AluSx SINE Alu 1 296 -16 526 193 118 0 chr2 241562651 241562770 -9125084 + MER3 DNA MER1_type 36 168 -41 1859 177 8 21 chr2 241562784 241563173 -9124681 + MER3 DNA MER1_type 2240 2623 0 509 266 0 56 chr2 241563196 241563339 -9124515 + MIR SINE MIR 25 159 -103 2222 144 0 0 chr2 241563436 241563748 -9124106 - AluSx SINE Alu 0 312 1 243 277 31 15 chr2 241563751 241563816 -9124038 + L2 LINE L2 2996 3061 -211 266 224 17 0 chr2 241564143 241564201 -9123653 + MLT1B LTR MaLR 332 390 0 425 248 0 11 chr2 241565909 241566193 -9121661 + (TG)n Simple_repeat Simple_repeat 1 280 0 204 302 0 0 chr2 241566273 241566399 -9121455 + (TG)n Simple_repeat Simple_repeat 2 127 0 566 221 0 6 chr2 241566420 241566751 -9121103 + (TG)n Simple_repeat Simple_repeat 1 329 0 1020 231 30 88 chr2 241566840 241567192 -9120662 - MLT1C LTR MaLR 0 467 145 2202 133 0 0 chr2 241567192 241567486 -9120368 - AluSx SINE Alu -18 294 1 1020 231 30 88 chr2 241567486 241567574 -9120280 - MLT1C LTR MaLR -322 145 53 2446 252 53 22 chr2 241567593 241568006 -9119848 + L1ME3 LINE L1 5344 5792 -370 2516 72 0 16 chr2 241568006 241568324 -9119530 + AluSq SINE Alu 1 313 0 2446 252 53 22 chr2 241568324 241568669 -9119185 + L1ME3 LINE L1 5792 6125 -37 904 91 0 0 chr2 241568673 241568783 -9119071 + AluSg SINE Alu 2 111 -199 1015 89 0 0 chr2 241568883 241569007 -9118847 - AluSq/x SINE Alu -188 124 1 550 300 40 24 chr2 241569091 241569388 -9118466 - L1MC4 LINE L1 -10 8032 7731 972 136 7 19 chr2 241569388 241569542 -9118312 + AluSg/x SINE Alu 137 288 -24 333 0 0 0 chr2 241569558 241569595 -9118259 + (CA)n Simple_repeat Simple_repeat 2 38 0 425 181 24 0 chr2 241569715 241569798 -9118056 + L1MA4A LINE L1 6196 6280 -23 369 274 56 16 chr2 241569796 241569998 -9117856 - L1MC4 LINE L1 -372 7670 7477 * 1850 139 47 78 chr2 241569998 241570385 -9117469 - THE1C LTR MaLR 0 375 1 369 274 56 16 chr2 241570385 241571208 -9116646 - L1MC4 LINE L1 -565 7477 6688 2591 99 3 11 chr2 241571302 241571674 -9116180 - L1PB1 LINE L1 -1 6150 5782 209 138 52 17 chr2 241571674 241571732 -9116122 + (TA)n Simple_repeat Simple_repeat 1 60 0 552 98 130 24 chr2 241571732 241571855 -9115999 - L1PB1 LINE L1 -360 5791 5656 * 603 271 147 56 chr2 241571850 241571974 -9115880 - L1MC4a LINE L1 -1304 6504 6393 1583 186 88 66 chr2 241571974 241572431 -9115423 - MLT1C LTR MaLR 0 467 1 603 271 147 56 chr2 241572431 241572692 -9115162 - L1MC4a LINE L1 -1415 6393 6157 2122 125 0 0 chr2 241572692 241572980 -9114874 + AluSx SINE Alu 1 288 -24 324 0 0 0 chr2 241572981 241573017 -9114837 + (TA)n Simple_repeat Simple_repeat 2 37 0 603 271 147 56 chr2 241573017 241573274 -9114580 - L1MC4a LINE L1 -1650 6158 5800 193 326 11 54 chr2 241574899 241574991 -9112863 - L3 LINE CR1 -520 1057 970 479 293 78 26 chr2 241575052 241575284 -9112570 - MIR SINE MIR -17 245 2 257 184 132 26 chr2 241576851 241576965 -9110889 + LTR16A LTR ERVL 238 363 -87 2223 92 37 0 chr2 241577668 241577962 -9109892 - AluSp SINE Alu -8 305 1 1935 168 0 0 chr2 241578264 241578567 -9109287 + AluJb SINE Alu 1 303 -9 279 173 0 0 chr2 241578569 241578621 -9109233 - L1MB7 LINE L1 -22 6162 6111 611 108 0 0 chr2 241578621 241578704 -9109150 + AluS SINE Alu 2 84 -228 698 148 8 16 chr2 241578704 241578826 -9109028 - L1MB7 LINE L1 -60 6124 6004 297 91 0 0 chr2 241578826 241578870 -9108984 - MER4E LTR ERV1 0 766 723 207 0 0 0 chr2 241578870 241578893 -9108961 + (CTATA)n Simple_repeat Simple_repeat 2 24 0 3394 225 92 23 chr2 241579012 241579198 -9108656 + L1ME3 LINE L1 4389 4561 -1601 531 112 75 28 chr2 241579198 241579305 -9108549 - L1MA8 LINE L1 -2 6289 6178 3394 225 92 23 chr2 241579305 241579869 -9107985 + L1ME3 LINE L1 4561 5085 -1077 2298 102 3 0 chr2 241579869 241580164 -9107690 + AluSx SINE Alu 1 296 -16 3394 225 92 23 chr2 241580164 241580748 -9107106 + L1ME3 LINE L1 5085 5851 -311 2138 131 20 3 chr2 241580748 241581054 -9106800 + AluSx SINE Alu 1 311 -1 3394 225 92 23 chr2 241581054 241581385 -9106469 + L1ME3 LINE L1 5851 6158 -4 2241 147 86 13 chr2 241583335 241583660 -9104194 + MSTA LTR MaLR 4 365 -63 1845 154 0 0 chr2 241583660 241583939 -9103915 - AluSx SINE Alu 0 312 34 2241 147 86 13 chr2 241583939 241584009 -9103845 + MSTA LTR MaLR 365 428 0 261 0 0 0 chr2 241584044 241584073 -9103781 + (TG)n Simple_repeat Simple_repeat 1 29 0 270 304 10 20 chr2 241584230 241584332 -9103522 + L1ME LINE L1 5635 5735 -386 709 227 110 102 chr2 241584343 241584431 -9103423 + MLT1J LTR MaLR 6 92 -419 2354 99 3 0 chr2 241584431 241584725 -9103129 - AluSp SINE Alu -18 295 1 2005 134 7 3 chr2 241584735 241585042 -9102812 - AluSx SINE Alu 0 308 1 709 227 110 102 chr2 241585042 241585443 -9102411 + MLT1J LTR MaLR 100 511 0 1962 151 3 13 chr2 241585601 241585900 -9101954 - AluJb SINE Alu -16 296 1 618 253 5 86 chr2 241585962 241586160 -9101694 + MIR SINE MIR 33 214 -48 1641 181 92 8 chr2 241586682 241586743 -9101111 - MLT1D LTR MaLR 0 505 451 2184 136 3 0 chr2 241586743 241587053 -9100801 + AluSx SINE Alu 1 311 -1 1641 181 92 8 chr2 241587053 241587361 -9100493 - MLT1D LTR MaLR -54 451 105 281 300 57 14 chr2 241587676 241587816 -9100038 + MER117 DNA MER1_type 1 146 -51 826 140 0 35 chr2 241587881 241588024 -9099830 - L1PB4 LINE L1 0 6156 6019 221 301 0 0 chr2 241588102 241588175 -9099679 + GA-rich Low_complexity Low_complexity 5 77 0 284 238 191 32 chr2 241589923 241590049 -9097805 - MER5A DNA MER1_type -26 163 18 1970 123 25 0 chr2 241590187 241590463 -9097391 - AluJo SINE Alu -29 283 1 2165 110 36 3 chr2 241590826 241591127 -9096727 - AluSx SINE Alu -1 311 1 280 125 21 0 chr2 241591127 241591175 -9096679 - AluSq/x SINE Alu -168 135 87 489 183 10 29 chr2 241591972 241592076 -9095778 + MLT1A2 LTR MaLR 1 102 -272 1943 87 0 12 chr2 241592076 241592330 -9095524 - AluY SINE Alu -7 304 54 228 285 32 81 chr2 241593272 241593395 -9094459 + MIR SINE MIR 36 152 -56 303 230 27 0 chr2 241593485 241593559 -9094295 + MER116 DNA Mariner 5 80 0 460 292 83 12 chr2 241593706 241593874 -9093980 - MIR3 SINE MIR -28 180 1 364 244 23 0 chr2 241594063 241594149 -9093705 + MIR SINE MIR 119 206 -56 2184 113 0 0 chr2 241594268 241594576 -9093278 - AluSx SINE Alu 0 308 1 427 267 8 17 chr2 241594984 241595104 -9092750 + L2 LINE L2 3193 3311 -2 2126 120 7 0 chr2 241595140 241595431 -9092423 + AluSq SINE Alu 1 293 -20 207 360 32 24 chr2 241595648 241595773 -9092081 + L2 LINE L2 2654 2779 -535 2138 184 0 24 chr2 241595778 241596203 -9091651 + L1MB7 LINE L1 5368 5782 -396 1296 112 0 0 chr2 241596205 241596374 -9091480 + AluSg/x SINE Alu 131 299 -11 852 198 45 0 chr2 241596375 241596532 -9091322 - MLT1A1 LTR MaLR 0 365 202 1613 160 257 20 chr2 241596545 241596988 -9090866 - LTR10A LTR ERV1 -61 548 1 577 232 173 12 chr2 241597022 241597190 -9090664 - MLT1A1 LTR MaLR -169 196 2 1110 192 13 4 chr2 241597190 241597419 -9090435 + L1MB7 LINE L1 5777 6007 -177 3432 126 55 47 chr2 241597419 241597615 -9090239 + MER4D LTR ERV1 1 194 -709 2100 96 60 4 chr2 241597615 241597896 -9089958 - AluSx SINE Alu -15 297 1 3432 126 55 47 chr2 241597896 241598243 -9089611 + MER4D LTR ERV1 194 552 -351 2440 59 3 0 chr2 241598243 241598533 -9089321 - AluY SINE Alu -20 291 1 3432 126 55 47 chr2 241598533 241598645 -9089209 + MER4D LTR ERV1 552 662 -241 226 319 92 71 chr2 241598862 241599157 -9088697 + L2 LINE L2 2564 2864 -450 348 24 0 0 chr2 241599168 241599209 -9088645 + (CA)n Simple_repeat Simple_repeat 1 41 0 394 226 28 47 chr2 241599727 241599833 -9088021 - MIR SINE MIR 0 262 159 2265 131 33 48 chr2 241600768 241601070 -9086784 - MLT1B LTR MaLR 0 390 93 2067 128 3 3 chr2 241601070 241601375 -9086479 + AluSx SINE Alu 1 305 0 2265 131 33 48 chr2 241601375 241601467 -9086387 - MLT1B LTR MaLR -297 93 1 579 294 36 5 chr2 241601485 241601679 -9086175 + MIR SINE MIR 48 247 -15 2271 98 0 7 chr2 241601764 241602051 -9085803 + AluSx SINE Alu 1 285 -27 781 61 0 35 chr2 241602097 241602212 -9085642 - L1P LINE L1 -2076 4070 3960 4047 36 0 0 chr2 241602212 241602662 -9085192 + L1PA5 LINE L1 5684 6154 0 362 292 138 12 chr2 241602669 241602991 -9084863 + L1MEd LINE L1 991 1344 -4785 2093 131 3 0 chr2 241603626 241603941 -9083913 - AluSx SINE Alu 0 319 4 416 306 8 24 chr2 241604702 241604826 -9083028 - L2 LINE L2 0 3313 3192 2298 97 0 3 chr2 241604832 241605131 -9082723 - AluSg SINE Alu -12 298 1 332 292 38 30 chr2 241605140 241605289 -9082565 - MIR SINE MIR -61 147 1 1865 160 20 0 chr2 241606750 241607050 -9080804 + AluSx SINE Alu 1 306 -6 359 273 73 37 chr2 241607559 241607720 -9080134 - L1MC4a LINE L1 -1902 5906 5752 1996 122 0 0 chr2 241607720 241607991 -9079863 - AluSx SINE Alu -5 307 37 359 273 73 37 chr2 241607991 241608129 -9079725 - L1MC4a LINE L1 -2056 5752 5538 207 0 0 0 chr2 241608913 241608936 -9078918 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1344 228 79 14 chr2 241609466 241609822 -9078032 - MLT1B LTR MaLR 0 390 12 189 245 41 0 chr2 241609834 241609883 -9077971 + L2 LINE L2 3262 3312 -1 * 626 267 101 10 chr2 241609880 241610097 -9077757 - MIR SINE MIR 0 262 34 1970 146 4 0 chr2 241610471 241610784 -9077070 + AluSx SINE Alu 1 314 0 2248 104 17 0 chr2 241612721 241613018 -9074836 - AluSx SINE Alu -10 302 1 233 204 0 0 chr2 241613018 241613067 -9074787 - L1MB3 LINE L1 -41 6142 6094 886 174 12 31 chr2 241613080 241613281 -9074573 - L1MA4 LINE L1 -205 5946 5812 636 114 105 18 chr2 241613288 241613402 -9074452 - FLAM_A SINE Alu -8 125 2 796 188 0 0 chr2 241613438 241613571 -9074283 + FLAM_C SINE Alu 1 133 0 1930 144 18 0 chr2 241613829 241614114 -9073740 - AluSq SINE Alu -23 290 1 732 208 39 0 chr2 241615532 241615662 -9072192 - FRAM SINE Alu -30 146 12 225 94 0 0 chr2 241615992 241616024 -9071830 + (GA)n Simple_repeat Simple_repeat 1 32 0 841 180 41 6 chr2 241616531 241616703 -9071151 + MER45A DNA AcHobo 1 178 0 21 0 0 0 chr2 241616950 241616971 -9070883 + AT_rich Low_complexity Low_complexity 1 21 0 197 392 25 0 chr2 241617517 241617596 -9070258 - L3 LINE CR1 -89 1488 1408 378 0 0 0 chr2 241617596 241617638 -9070216 + (TTA)n Simple_repeat Simple_repeat 2 43 0 678 309 55 0 chr2 241617643 241617863 -9069991 - MIR SINE MIR -2 260 29 1276 223 124 9 chr2 241617929 241618365 -9069489 - MLT1E LTR MaLR 0 593 108 292 228 12 8 chr2 241618465 241618557 -9069297 - L1M4 LINE L1 -1785 4361 4271 2050 124 0 40 chr2 241618557 241618856 -9068998 - AluSx SINE Alu -25 287 1 292 228 12 8 chr2 241618856 241618978 -9068876 - L1M4 LINE L1 -1875 4271 4074 2190 69 0 14 chr2 241619353 241619628 -9068226 + AluY SINE Alu 39 309 -2 2297 100 3 0 chr2 241620223 241620514 -9067340 - AluSq SINE Alu -21 292 1 197 314 12 23 chr2 241620532 241620618 -9067236 - MIR SINE MIR -104 104 20 2416 79 3 0 chr2 241621240 241621531 -9066323 + AluSp SINE Alu 9 300 -13 1518 211 107 42 chr2 241621785 241622353 -9065501 + L1MC5 LINE L1 7313 7917 -44 23 33 0 0 chr2 241622359 241622389 -9065465 + AT_rich Low_complexity Low_complexity 1 30 0 226 250 98 71 chr2 241622529 241622641 -9065213 + L2 LINE L2 3158 3272 0 221 203 0 78 chr2 241623464 241623488 -9064366 + (TAA)n Simple_repeat Simple_repeat 1 25 -34 2238 115 0 0 chr2 241623488 241623783 -9064071 + AluSx SINE Alu 1 295 -17 221 203 0 78 chr2 241623783 241623822 -9064032 + (TAA)n Simple_repeat Simple_repeat 25 59 0 2218 92 3 55 chr2 241624302 241624627 -9063227 - AluSx SINE Alu -4 308 1 208 299 0 45 chr2 241624947 241625014 -9062840 + MIR SINE MIR 85 148 -60 423 239 8 8 chr2 241625168 241625285 -9062569 + L1MC4 LINE L1 7464 7580 -462 2135 105 18 0 chr2 241625304 241625580 -9062274 + AluSx SINE Alu 11 291 -21 859 268 76 13 chr2 241625597 241625899 -9061955 + L1MC4 LINE L1 7578 7898 -144 460 294 44 0 chr2 241626022 241626158 -9061696 + MIR SINE MIR 86 227 -35 296 260 84 136 chr2 241626204 241626369 -9061485 + L2 LINE L2 2919 3060 -212 2533 70 0 0 chr2 241626369 241626669 -9061185 - AluY SINE Alu -11 300 1 296 260 84 136 chr2 241626669 241626826 -9061028 + L2 LINE L2 3060 3224 -48 291 232 81 30 chr2 241626917 241627016 -9060838 - MER91C DNA MER1_type -36 104 1 21 0 0 0 chr2 241627593 241627614 -9060240 + AT_rich Low_complexity Low_complexity 1 21 0 246 128 0 0 chr2 241627733 241627772 -9060082 + (TTTC)n Simple_repeat Simple_repeat 1 39 0 2293 123 0 0 chr2 241627782 241628092 -9059762 - AluSg SINE Alu 0 310 1 1992 119 6 16 chr2 241628116 241628428 -9059426 - AluSq SINE Alu -4 309 1 190 318 136 11 chr2 241628734 241628822 -9059032 + MIR SINE MIR 158 256 -6 399 281 146 37 chr2 241630850 241631002 -9056852 + L1ME LINE L1 5319 5453 -668 2323 106 0 0 chr2 241631002 241631303 -9056551 + AluSq SINE Alu 1 301 -12 399 281 146 37 chr2 241631303 241631336 -9056518 + L1ME LINE L1 5453 5481 -640 2302 87 7 7 chr2 241631336 241631635 -9056219 + AluSp SINE Alu 1 299 -14 399 281 146 37 chr2 241631635 241631776 -9056078 + L1ME LINE L1 5481 5682 -439 574 210 0 40 chr2 241631805 241631929 -9055925 - L2 LINE L2 -1 3312 3194 333 204 194 0 chr2 241633004 241633097 -9054757 + MER5B DNA MER1_type 66 176 -2 306 318 138 53 chr2 241633445 241634052 -9053802 + L2 LINE L2 2228 2886 -428 487 235 70 9 chr2 241634078 241634193 -9053661 - L2 LINE L2 0 3313 3192 902 228 60 34 chr2 241634272 241634510 -9053344 + MIR SINE MIR 9 248 -14 1835 195 7 0 chr2 241634512 241634815 -9053039 - AluJo SINE Alu -3 309 5 214 256 61 85 chr2 241634822 241634904 -9052950 + L2 LINE L2 3192 3271 -1 306 313 31 34 chr2 241635252 241635382 -9052472 + MIR3 SINE MIR 68 202 -6 432 287 135 8 chr2 241635614 241635858 -9051996 + L1ME4a LINE L1 5603 5877 -244 315 350 58 0 chr2 241636649 241636769 -9051085 + MIR3 SINE MIR 60 186 -22 235 219 12 12 chr2 241637275 241637357 -9050497 + (TG)n Simple_repeat Simple_repeat 1 82 0 631 106 11 21 chr2 241637721 241637815 -9050039 + AluSg/x SINE Alu 180 272 -38 283 275 56 78 chr2 241638487 241638629 -9049225 + MER5A DNA MER1_type 1 139 -50 * 607 152 16 64 chr2 241638505 241638630 -9049224 - MER5A DNA MER1_type -10 179 61 660 234 0 0 chr2 241638633 241638757 -9049097 + FLAM_A SINE Alu 3 126 -7 326 318 167 16 chr2 241638940 241639198 -9048656 + L2 LINE L2 3011 3307 -6 2241 100 0 31 chr2 241639745 241640064 -9047790 - AluSq SINE Alu -4 309 1 2065 183 65 37 chr2 241640675 241641166 -9046688 - MLT1D LTR MaLR 0 505 1 1518 136 0 23 chr2 241642048 241642306 -9045548 + L1MD3 LINE L1 7744 7995 0 1754 169 23 19 chr2 241642315 241642623 -9045231 + AluJb SINE Alu 1 309 -3 239 108 27 0 chr2 241642624 241642661 -9045193 + AluSx SINE Alu 1 38 -264 670 236 128 47 chr2 241642761 241643057 -9044797 + MLT1H LTR MaLR 230 549 0 187 281 0 18 chr2 241643288 241643345 -9044509 - L2 LINE L2 -1 3312 3257 265 228 0 0 chr2 241644770 241644827 -9043027 + MER94 DNA DNA 1 57 -77 2090 112 0 0 chr2 241645134 241645403 -9042451 + AluSx SINE Alu 21 289 -23 238 296 62 62 chr2 241645928 241646107 -9041747 + MIR3 SINE MIR 5 183 -25 261 286 129 14 chr2 241646511 241646658 -9041196 + L3 LINE CR1 1308 1471 -106 2088 111 23 7 chr2 241647433 241647739 -9040115 + AluSx SINE Alu 1 311 -1 396 223 36 22 chr2 241647763 241647902 -9039952 - L1ME1 LINE L1 -62 6104 5964 844 144 72 61 chr2 241647948 241648129 -9039725 - AluJb SINE Alu -45 267 85 355 235 154 56 chr2 241648256 241648418 -9039436 + MIR3 SINE MIR 23 200 -8 351 0 0 0 chr2 241648553 241648592 -9039262 + (CA)n Simple_repeat Simple_repeat 2 40 0 190 292 192 0 chr2 241648934 241649054 -9038800 + L2 LINE L2 3159 3301 -12 371 368 18 0 chr2 241649082 241649245 -9038609 - MIR SINE MIR -61 201 36 215 224 290 9 chr2 241649615 241649688 -9038166 - MER5A DNA MER1_type -27 162 111 2023 139 10 3 chr2 241649688 241649982 -9037872 - AluSx SINE Alu -4 308 13 215 224 290 9 chr2 241649982 241650015 -9037839 - MER5A DNA MER1_type -78 111 26 3429 156 23 75 chr2 241650347 241651076 -9036778 + LTR8 LTR ERV1 1 691 0 2331 97 0 0 chr2 241651718 241652008 -9035846 - AluSq SINE Alu -22 291 2 230 327 67 36 chr2 241652948 241653132 -9034722 - MIR3 SINE MIR -57 205 14 1679 176 3 27 chr2 241653292 241653587 -9034267 - AluJo SINE Alu -24 288 1 2260 105 3 37 chr2 241654530 241654666 -9033188 + AluSq SINE Alu 1 140 -173 2282 93 6 16 chr2 241654666 241654977 -9032877 + AluY SINE Alu 1 308 -3 2260 105 3 37 chr2 241654977 241655163 -9032691 + AluSq SINE Alu 140 312 -1 3639 161 38 19 chr2 241655270 241656093 -9031761 + L1MA9 LINE L1 5352 6290 -22 2242 123 0 3 chr2 241656213 241656513 -9031341 - AluSx SINE Alu -13 299 1 426 20 0 0 chr2 241657232 241657283 -9030571 + (TG)n Simple_repeat Simple_repeat 1 51 0 947 286 38 75 chr2 241657503 241658142 -9029712 + L1MC4a LINE L1 5319 5933 -1875 2333 95 3 0 chr2 241658361 241658671 -9029183 + AluSx SINE Alu 1 311 0 558 279 148 47 chr2 241659033 241659398 -9028456 + L1M4 LINE L1 3886 4287 -1859 684 293 119 46 chr2 241659423 241659948 -9027906 + L1M4 LINE L1 4333 4894 -1252 6565 198 37 24 chr2 241659953 241661468 -9026386 + L1M4 LINE L1 3664 5204 -942 1757 175 32 19 chr2 241661468 241661776 -9026078 + AluSx SINE Alu 1 312 0 6565 198 37 24 chr2 241661776 241661900 -9025954 + L1M4 LINE L1 5204 5325 -821 1939 158 0 0 chr2 241661900 241662184 -9025670 + AluJb SINE Alu 1 284 -28 216 228 0 0 chr2 241662185 241662242 -9025612 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 1160 292 19 19 chr2 241862254 241862720 -8825134 + L1M4 LINE L1 3150 3615 -2531 * 1871 63 8 12 chr2 241862710 241862962 -8824892 + L1P LINE L1 1 251 -5895 207 343 20 30 chr2 241864135 241864234 -8823620 - L2 LINE L2 -1 3271 3174 * 428 258 52 77 chr2 241864221 241864415 -8823439 - MIR SINE MIR -3 259 71 259 333 177 16 chr2 241864458 241864650 -8823204 - L2 LINE L2 -91 3181 2959 875 236 92 17 chr2 241865365 241865658 -8822196 - LTR33A LTR ERVL -1 522 208 499 149 138 149 chr2 241865870 241865985 -8821869 - MER5A DNA MER1_type 0 189 75 1924 145 7 3 chr2 241865985 241866295 -8821559 - AluJb SINE Alu 0 312 2 499 149 138 149 chr2 241866295 241866367 -8821487 - MER5A DNA MER1_type -114 75 4 2933 165 72 22 chr2 241866914 241867559 -8820295 - L1MB8 LINE L1 -9 6169 5442 293 343 58 17 chr2 241867591 241867763 -8820091 + MIR SINE MIR 18 196 -66 375 266 0 116 chr2 241867770 241867943 -8819911 + MIR SINE MIR 110 262 0 270 289 159 43 chr2 241868179 241868456 -8819398 - L2 LINE L2 -11 3302 2994 1505 154 48 24 chr2 241868724 241869017 -8818837 - AluJo SINE Alu -12 300 1 739 191 0 0 chr2 241869021 241869147 -8818707 - FLAM_A SINE Alu -7 126 1 670 242 106 66 chr2 241869182 241869455 -8818399 + MLT1C LTR MaLR 132 415 -52 304 271 14 0 chr2 241869759 241869829 -8818025 + L1MEd LINE L1 647 717 -5488 263 203 0 17 chr2 241870063 241870122 -8817732 + L1MEd LINE L1 942 999 -5206 758 155 17 0 chr2 241870135 241870251 -8817603 + AluSq/x SINE Alu 11 128 -185 2106 120 0 7 chr2 241870257 241870557 -8817297 - AluSq SINE Alu -15 298 1 420 215 98 77 chr2 241870561 241870828 -8817026 + L1MEd LINE L1 990 1267 -4938 2071 134 0 0 chr2 241870828 241871134 -8816720 + AluSq SINE Alu 1 306 -7 420 215 98 77 chr2 241871134 241871191 -8816663 + L1MEd LINE L1 1267 1321 -4884 7223 142 29 8 chr2 241871239 241872438 -8815416 + Tigger3b DNA MER2_type 7 1231 0 637 140 0 0 chr2 241872477 241872577 -8815277 + AluSg/x SINE Alu 209 308 -2 575 217 85 16 chr2 241872577 241872766 -8815088 + L1MEd LINE L1 1465 1666 -4549 2022 256 104 25 chr2 241872903 241873692 -8814162 + L1MEd LINE L1 1897 2784 -3431 1938 110 3 45 chr2 241873692 241874001 -8813853 - AluSq SINE Alu -14 299 4 2022 256 104 25 chr2 241874001 241874439 -8813415 + L1MEd LINE L1 2784 3186 -3029 194 313 191 21 chr2 241874470 241874988 -8812866 - L2 LINE L2 -337 2977 2372 431 225 129 44 chr2 241875348 241875681 -8812173 - L1MC5 LINE L1 -188 7854 7534 2261 90 0 0 chr2 241875689 241875988 -8811866 - AluSx SINE Alu -13 299 1 312 87 0 0 chr2 241875994 241876040 -8811814 + MADE1 DNA Mariner 35 80 0 323 235 25 12 chr2 241876047 241876128 -8811726 - L1MC5 LINE L1 -542 7419 7338 766 162 0 22 chr2 241876312 241876448 -8811406 - FLAM_C SINE Alu 0 133 1 294 269 99 60 chr2 241876471 241876672 -8811182 - L1MC4 LINE L1 -724 7318 7110 1970 106 10 13 chr2 241876683 241876984 -8810870 + AluSx SINE Alu 1 300 -12 278 176 104 48 chr2 241877161 241877286 -8810568 - L1MC4 LINE L1 -974 7068 6937 22 56 0 0 chr2 241877888 241877924 -8809930 + AT_rich Low_complexity Low_complexity 1 36 0 3203 183 78 31 chr2 241878457 241878668 -8809186 - L1MB5 LINE L1 -36 6138 5938 1804 141 0 10 chr2 241878668 241878973 -8808881 - AluSx SINE Alu -10 302 1 3203 183 78 31 chr2 241878973 241879202 -8808652 - L1MB5 LINE L1 -236 5938 5721 1792 157 13 10 chr2 241879202 241879508 -8808346 - AluJo SINE Alu -5 307 1 3203 183 78 31 chr2 241879508 241880244 -8807610 - L1MB5 LINE L1 -453 5721 4900 1695 152 11 3 chr2 241880470 241880778 -8807076 - AluJo SINE Alu 0 310 1 26 0 0 0 chr2 241881050 241881076 -8806778 + AT_rich Low_complexity Low_complexity 1 26 0 289 262 107 0 chr2 241881290 241881412 -8806442 + L1ME LINE L1 5618 5752 -369 226 208 169 0 chr2 241881794 241881871 -8805983 + HAL1b LINE L1 1253 1342 -6 2090 119 7 0 chr2 241882497 241882807 -8805047 - AluSx SINE Alu 0 312 1 1615 187 0 0 chr2 241882807 241883090 -8804764 - AluJo SINE Alu -28 284 2 1408 180 3 90 chr2 241883092 241883425 -8804429 - AluJo SINE Alu -8 304 1 2190 112 0 3 chr2 241883464 241883776 -8804078 + AluSx SINE Alu 1 311 -1 436 253 231 11 chr2 241884762 241884966 -8802888 + MIR SINE MIR 10 259 -3 25 31 0 0 chr2 241885036 241885068 -8802786 + AT_rich Low_complexity Low_complexity 1 32 0 1240 14 0 7 chr2 241885082 241885224 -8802630 + L1PA5 LINE L1 5832 5972 -182 240 227 30 0 chr2 241885224 241885290 -8802564 + MIR SINE MIR 176 243 -19 2265 92 0 3 chr2 241885535 241885840 -8802014 - AluSq SINE Alu -9 304 1 882 299 78 17 chr2 241885846 241886254 -8801600 - L1MC4a LINE L1 -1894 5914 5482 1328 165 68 54 chr2 241886260 241886563 -8801291 - AluJb SINE Alu 0 307 1 842 116 0 48 chr2 241886564 241886588 -8801266 - FLAM_C SINE Alu -172 140 116 2147 98 7 0 chr2 241886588 241886884 -8800970 + AluSx SINE Alu 1 298 -14 842 116 0 48 chr2 241886884 241887006 -8800848 - FLAM_C SINE Alu -196 116 1 635 219 76 0 chr2 241887014 241887237 -8800617 - L1MC4a LINE L1 -747 5399 5227 931 183 291 0 chr2 241887244 241887327 -8800527 + AluJo SINE Alu 1 59 -243 219 69 0 0 chr2 241887327 241887356 -8800498 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 931 183 291 0 chr2 241887356 241887502 -8800352 + AluJo SINE Alu 59 297 -5 350 351 50 53 chr2 241887519 241887818 -8800036 - L2 LINE L2 -75 3197 2900 275 259 96 30 chr2 241887960 241888095 -8799759 - MER5B DNA MER1_type -30 148 5 221 167 61 15 chr2 241888235 241888301 -8799553 + T-rich Low_complexity Low_complexity 2 70 0 652 165 0 0 chr2 241888302 241888411 -8799443 - HY1 scRNA scRNA -2 110 2 297 186 57 14 chr2 241888414 241888484 -8799370 - MER5A DNA MER1_type -116 73 1 473 265 96 0 chr2 241889887 241890023 -8797831 + MIR SINE MIR 43 191 -71 342 275 66 0 chr2 241890214 241890331 -8797523 + MIR SINE MIR 44 169 -65 2196 93 3 3 chr2 241890408 241890708 -8797146 + AluSx SINE Alu 1 300 -12 333 280 52 75 chr2 241891361 241891484 -8796370 - L1M4 LINE L1 -747 5399 5275 2169 125 0 0 chr2 241891484 241891797 -8796057 - AluSq SINE Alu 0 313 1 333 280 52 75 chr2 241891797 241892059 -8795795 - L1M4 LINE L1 -871 5275 5023 267 346 78 39 chr2 241892236 241892542 -8795312 + L1ME4a LINE L1 5616 5933 -188 204 158 0 0 chr2 241894440 241894478 -8793376 + (TG)n Simple_repeat Simple_repeat 1 38 0 22 0 0 0 chr2 241897155 241897177 -8790677 + AT_rich Low_complexity Low_complexity 1 22 0 2218 97 3 7 chr2 241897194 241897503 -8790351 - AluSx SINE Alu -4 308 1 855 119 0 0 chr2 241897503 241897621 -8790233 - AluSq/x SINE Alu -195 118 1 2188 79 3 3 chr2 241899193 241899483 -8788371 - AluSp SINE Alu -17 296 7 334 207 86 26 chr2 241899537 241899653 -8788201 - L1ME4a LINE L1 -35 6086 5964 21 36 0 0 chr2 241900103 241900131 -8787723 + AT_rich Low_complexity Low_complexity 1 28 0 1797 163 0 0 chr2 241900492 241900781 -8787073 - AluSx SINE Alu -23 289 1 372 317 127 59 chr2 241901008 241901465 -8786389 - L1M4 LINE L1 -2479 3667 3242 2027 116 0 35 chr2 241901465 241901784 -8786070 - AluSx SINE Alu -4 308 1 1864 153 0 3 chr2 241901786 241902094 -8785760 - AluSx SINE Alu -5 307 1 372 317 127 59 chr2 241902094 241902138 -8785716 - L1M4 LINE L1 -2904 3242 3129 1870 127 27 0 chr2 241902140 241902432 -8785422 - AluSx SINE Alu -12 300 1 387 315 24 108 chr2 241902582 241902699 -8785155 - L1M4 LINE L1 -3644 2502 2377 1690 165 0 4 chr2 241902699 241902978 -8784876 - AluJo SINE Alu -12 300 23 387 315 24 108 chr2 241902978 241903148 -8784706 - L1M4 LINE L1 -3769 2377 2252 1595 178 20 0 chr2 241903148 241903452 -8784402 - AluJo SINE Alu -2 310 1 387 315 24 108 chr2 241903452 241903544 -8784310 - L1M4 LINE L1 -3894 2252 2154 1601 201 3 0 chr2 241903607 241903920 -8783934 - AluJb SINE Alu 0 314 1 200 33 0 33 chr2 241904003 241904033 -8783821 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 276 100 0 0 chr2 241904034 241904074 -8783780 + (TCCCC)n Simple_repeat Simple_repeat 1 40 0 866 197 5 37 chr2 241904101 241904289 -8783565 - AluJb SINE Alu 0 312 131 241 324 60 100 chr2 241904839 241905120 -8782734 - L2 LINE L2 -2 3270 3001 237 155 0 0 chr2 241905159 241905217 -8782637 + (TG)n Simple_repeat Simple_repeat 2 59 0 2302 54 3 14 chr2 241906410 241906707 -8781147 - AluY SINE Alu -17 294 1 2073 106 10 0 chr2 241906892 241907184 -8780670 - AluSx SINE Alu -15 297 3 403 212 119 17 chr2 241907454 241907572 -8780282 + L2 LINE L2 3181 3310 -3 511 266 38 32 chr2 241909356 241909514 -8778340 + MIR SINE MIR 46 204 -58 2313 117 3 0 chr2 241909901 241910210 -8777644 + AluSx SINE Alu 1 310 -2 2386 102 0 3 chr2 241911540 241911845 -8776009 + AluSx SINE Alu 1 304 -8 2348 82 0 35 chr2 241911881 241912198 -8775656 - AluSg SINE Alu 0 310 5 324 291 59 92 chr2 241912331 241912602 -8775252 - L1MC4a LINE L1 -1849 5959 5698 1429 176 164 42 chr2 241913403 241913500 -8774354 + MSTD LTR MaLR 1 85 -311 2543 84 3 0 chr2 241913500 241913808 -8774046 + AluSp SINE Alu 2 310 -3 1429 176 164 42 chr2 241913808 241914063 -8773791 + MSTD LTR MaLR 85 396 0 1165 243 157 14 chr2 241914184 241914616 -8773238 - MLT1D LTR MaLR 0 505 12 657 208 21 7 chr2 241914884 241915028 -8772826 + Charlie4 DNA MER1_type 1816 1961 0 464 186 39 10 chr2 241915276 241915378 -8772476 + MIR SINE MIR 73 177 -85 2045 148 0 3 chr2 241915746 241916044 -8771810 + AluJo SINE Alu 1 297 -15 2080 102 35 0 chr2 241916307 241916592 -8771262 - AluSx SINE Alu -13 299 5 225 0 0 0 chr2 241918050 241918075 -8769779 + (T)n Simple_repeat Simple_repeat 1 25 0 681 139 73 36 chr2 241918240 241918377 -8769477 - FLAM_C SINE Alu 0 143 2 309 213 0 0 chr2 241918837 241918898 -8768956 - MER94 DNA DNA -72 62 2 4613 216 90 32 chr2 241918957 241921306 -8766548 - L1ME2 LINE L1 0 6164 3685 932 155 0 0 chr2 241921374 241921503 -8766351 + AluSq/x SINE Alu 1 129 -183 272 262 105 35 chr2 241921520 241921692 -8766162 - L1ME2 LINE L1 -2523 3623 3440 279 342 0 25 chr2 241921755 241921875 -8765979 + L2 LINE L2 3193 3309 -4 689 193 0 0 chr2 241923226 241923335 -8764519 - FLAM_A SINE Alu -20 122 14 1607 196 7 11 chr2 241923896 241924182 -8763672 - AluJb SINE Alu -27 285 1 267 178 41 14 chr2 241924208 241924281 -8763573 - L1ME4a LINE L1 -30 6091 6017 431 78 0 0 chr2 241924399 241924463 -8763391 - L1MB2 LINE L1 -4 6167 6104 2152 129 7 0 chr2 241925288 241925590 -8762264 - AluSx SINE Alu -8 304 1 605 193 46 110 chr2 241926032 241926250 -8761604 + MER20 DNA MER1_type 16 219 0 243 284 193 23 chr2 241926272 241926490 -8761364 - L1ME4a LINE L1 -149 5972 5718 22 0 0 0 chr2 241926787 241926809 -8761045 + AT_rich Low_complexity Low_complexity 1 22 0 239 290 93 9 chr2 241929136 241929243 -8758611 - L1ME4a LINE L1 -459 5711 5596 403 262 215 76 chr2 241929405 241929982 -8757872 + L2 LINE L2 2319 2975 -339 3617 189 51 1 chr2 241931024 241931806 -8756048 - L1MD1 LINE L1 -68 6174 5354 1227 229 44 36 chr2 241931915 241932300 -8755554 - L1MDa LINE L1 -6118 422 35 191 311 169 23 chr2 241932401 241932578 -8755276 - L3 LINE CR1 -749 828 626 2430 94 0 3 chr2 241933434 241933743 -8754111 - AluY SINE Alu -3 308 1 715 306 102 37 chr2 241933894 241934403 -8753451 - L1MC4a LINE L1 -1907 5901 5360 364 255 98 44 chr2 241934685 241934889 -8752965 - L1ME3A LINE L1 -121 6049 5835 768 216 260 22 chr2 241934915 241935281 -8752573 - L1ME3A LINE L1 -433 5737 5285 2373 112 0 3 chr2 241935594 241935898 -8751956 - AluSx SINE Alu -9 303 1 340 269 107 40 chr2 241936800 241936949 -8750905 - MIR SINE MIR -80 182 24 180 0 0 0 chr2 241937131 241937151 -8750703 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1405 266 76 11 chr2 241938298 241938772 -8749082 + L1MC4a LINE L1 5453 5957 -1851 403 330 48 11 chr2 241938950 241939222 -8748632 - L1ME4a LINE L1 -496 5625 5342 * 5438 144 26 60 chr2 241939216 241940367 -8747487 + L1MA3 LINE L1 4125 5236 -910 1429 139 10 0 chr2 241940367 241940575 -8747279 + AluY SINE Alu 2 211 -100 445 85 0 0 chr2 241940575 241940634 -8747220 + AluY SINE Alu 76 134 -177 2347 78 0 0 chr2 241940634 241940942 -8746912 + AluY SINE Alu 1 308 0 6153 105 45 14 chr2 241940943 241941988 -8745866 + L1MA3 LINE L1 5228 6305 0 325 162 152 50 chr2 241941997 241942096 -8745758 - L1ME4a LINE L1 -2445 5363 5255 1039 211 162 11 chr2 241943596 241943880 -8743974 + MER58B DNA MER1_type 13 339 -2 638 25 12 0 chr2 241946991 241947071 -8740783 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 1011 194 5 5 chr2 241947809 241948000 -8739854 - AluJ SINE Alu -4 308 118 540 180 40 10 chr2 241948027 241948127 -8739727 - AluJ SINE Alu -186 126 24 2417 98 0 0 chr2 241950851 241951158 -8736696 - AluSc SINE Alu -2 307 1 304 331 181 30 chr2 241951356 241951622 -8736232 - L1MC/D LINE L1 -2226 5582 5277 251 117 195 65 chr2 241955677 241955754 -8732100 + MER58 DNA MER1_type 5 91 -124 26 0 0 0 chr2 241955763 241955789 -8732065 + AT_rich Low_complexity Low_complexity 1 26 0 3550 155 24 14 chr2 241956705 241957324 -8730530 - MER51A LTR ERV1 -9 625 1 928 176 7 0 chr2 241959823 241959971 -8727883 - AluJb SINE Alu -15 297 149 1779 250 74 26 chr2 241962282 241962891 -8724963 + L1MB8 LINE L1 5536 6173 -5 314 310 114 55 chr2 241965681 241966042 -8721812 - L2 LINE L2 -50 3222 2841 463 324 109 0 chr2 241966176 241966386 -8721468 - MIR SINE MIR -3 259 27 2113 111 62 0 chr2 241966854 241967142 -8720712 - AluSx SINE Alu -6 306 1 212 262 10 97 chr2 241968222 241968325 -8719529 - L3 LINE CR1 -1302 275 182 2351 87 0 13 chr2 241968857 241969167 -8718687 + AluSc SINE Alu 1 306 -3 21 0 0 0 chr2 241969264 241969285 -8718569 + AT_rich Low_complexity Low_complexity 1 21 0 217 306 28 0 chr2 241971354 241971426 -8716428 - MIR3 SINE MIR -8 200 127 283 256 73 12 chr2 241971541 241971705 -8716149 + (CACCT)n Simple_repeat Simple_repeat 5 178 0 227 179 0 113 chr2 241971765 241971960 -8715894 + (CACTC)n Simple_repeat Simple_repeat 1 173 0 778 163 0 0 chr2 241973715 241973844 -8714010 + FLAM_C SINE Alu 1 129 -4 324 244 231 0 chr2 241974530 241974690 -8713164 - L1M4 LINE L1 -3609 2537 2341 304 114 0 0 chr2 241980993 241981037 -8706817 - MLT1L LTR MaLR -224 391 348 1171 221 4 4 chr2 241981089 241981333 -8706521 - AluJo SINE Alu -12 300 57 385 248 53 38 chr2 241981344 241981477 -8706377 - MLT1L LTR MaLR -326 289 155 493 286 67 10 chr2 241981499 241981702 -8706152 - MIR SINE MIR -27 235 20 2317 108 0 3 chr2 241983397 241983704 -8704150 - AluSx SINE Alu -6 306 1 610 331 103 15 chr2 241986366 241986774 -8701080 - L1ME LINE L1 -429 5733 5290 439 335 75 16 chr2 241986793 241986981 -8700873 + L1MC/D LINE L1 5607 5805 -2003 2428 85 0 0 chr2 241987523 241987817 -8700037 + AluSc SINE Alu 1 294 -15 288 0 0 0 chr2 241987869 241987901 -8699953 + (TG)n Simple_repeat Simple_repeat 2 33 0 945 115 0 0 chr2 241990497 241990619 -8697235 + AluSg/x SINE Alu 174 295 -15 309 311 79 32 chr2 241990628 241990818 -8697036 - L1M4 LINE L1 -439 5739 5541 920 161 4 2 chr2 241990823 241991072 -8696782 - AluJb SINE Alu -4 308 2 635 288 98 21 chr2 241991123 241991448 -8696406 - L1M4 LINE L1 -753 5427 5057 1834 186 0 3 chr2 241991448 241991749 -8696105 + AluSx SINE Alu 2 301 -11 635 288 98 21 chr2 241991749 241991874 -8695980 - L1M4 LINE L1 -1123 5057 4943 923 142 14 0 chr2 241991922 241992070 -8695784 + MER46A DNA MER2_type 87 236 0 305 286 113 6 chr2 241992110 241992278 -8695576 - L1M4 LINE L1 -1197 4949 4764 490 153 0 0 chr2 241992333 241992418 -8695436 + AluY SINE Alu 218 302 -9 270 302 42 0 chr2 241992488 241992584 -8695270 - L1M4 LINE L1 -1540 4606 4507 424 282 96 80 chr2 241992638 241992714 -8695140 - L1M4 LINE L1 -1829 4317 4244 2147 114 13 19 chr2 241992714 241993022 -8694832 - AluJb SINE Alu -6 306 1 424 282 96 80 chr2 241993022 241993671 -8694183 - L1M4 LINE L1 -1902 4244 3580 228 294 65 0 chr2 241995614 241995706 -8692148 + L1MC/D LINE L1 5552 5649 -472 386 244 156 49 chr2 241995948 241996153 -8691701 - L2 LINE L2 -5 3308 3082 1864 141 29 10 chr2 241996866 241997172 -8690682 + AluJo SINE Alu 1 312 0 311 190 25 13 chr2 241998246 241998325 -8689529 + MER116 DNA Mariner 1 80 0 2185 125 3 28 chr2 241998386 241998705 -8689149 - AluSx SINE Alu -1 311 1 324 64 0 0 chr2 241999837 241999884 -8687970 + (TG)n Simple_repeat Simple_repeat 1 47 0 283 250 0 0 chr2 241999946 242000006 -8687848 + L2 LINE L2 3242 3301 -12 1714 171 61 3 chr2 242000301 242000629 -8687225 + MER7A DNA MER2_type 2 346 0 572 336 57 19 chr2 242002444 242002813 -8685041 + L1MC/D LINE L1 5380 5762 -2046 1113 166 174 19 chr2 242002816 242003075 -8684779 + AluJo SINE Alu 1 299 -3 246 149 106 0 chr2 242003091 242003138 -8684716 + L1MC/D LINE L1 5623 5674 -2134 404 266 66 66 chr2 242003145 242003449 -8684405 + L1MC4a LINE L1 5638 5941 -1867 729 174 0 47 chr2 242003593 242003742 -8684112 - FLAM_C SINE Alu 0 143 2 250 262 25 74 chr2 242004030 242004152 -8683702 + L1MC/D LINE L1 5787 5902 -1906 184 216 118 0 chr2 242006430 242006481 -8681373 + L2 LINE L2 3004 3060 -212 1601 60 5 37 chr2 242007185 242007403 -8680451 - L1PA10 LINE L1 -10 6158 5948 33417 47 33 1 chr2 242007503 242012036 -8675818 - L1PA10 LINE L1 -1211 4935 259 585 214 0 0 chr2 242014543 242014655 -8673199 - FLAM_A SINE Alu -4 138 27 5110 148 14 2 chr2 242014973 242015878 -8671976 - HSMAR2 DNA Mariner -385 917 2 217 343 0 0 chr2 242016766 242016833 -8671021 + (TG)n Simple_repeat Simple_repeat 1 67 0 263 282 45 13 chr2 242017456 242017612 -8670242 - L1MC4 LINE L1 -189 7853 7693 * 801 224 55 0 chr2 242017611 242017812 -8670042 + L1M4 LINE L1 4791 5002 -1144 6651 115 95 3 chr2 242017918 242019008 -8668846 + THE1A-int LTR MaLR 390 1580 0 1482 153 18 7 chr2 242019008 242019290 -8668564 + THE1A LTR MaLR 1 285 -70 1059 120 11 2 chr2 242019291 242019550 -8668304 + THE1-int LTR MaLR 373 680 -900 382 117 39 65 chr2 242019554 242019631 -8668223 + THE1A LTR MaLR 301 375 0 590 253 174 0 chr2 242019657 242019910 -8667944 + MLT2F LTR ERVL 367 663 0 400 247 23 78 chr2 242019967 242020231 -8667623 - MER74B LTR ERVL -162 460 1 443 199 0 4 chr2 242020231 242020331 -8667523 - L1M4 LINE L1 -504 5662 5575 305 248 109 0 chr2 242020435 242020536 -8667318 - L1M4 LINE L1 -566 5600 5489 625 162 43 0 chr2 242020536 242020653 -8667201 - MSTB1 LTR MaLR 0 432 311 * 2361 139 58 0 chr2 242020646 242021079 -8666775 - Tigger2 DNA MER2_type -1410 1308 851 4453 176 15 6 chr2 242021508 242022387 -8665467 - Tigger2 DNA MER2_type -1831 887 1 2388 189 18 6 chr2 242022637 242023128 -8664726 - Ricksha DNA DNA -7 3244 2748 1215 141 5 0 chr2 242023128 242023312 -8664542 - AluSq SINE Alu -125 188 4 1555 144 40 7 chr2 242023315 242023613 -8664241 - Ricksha DNA DNA -500 2746 2439 614 158 6 89 chr2 242023643 242023801 -8664053 - Ricksha DNA DNA -1109 145 1 199 307 178 0 chr2 242024060 242024161 -8663693 - MER5C DNA MER1_type -205 119 1 1722 101 0 0 chr2 242024241 242024494 -8663360 + AluSx SINE Alu 64 312 0 391 278 19 0 chr2 242024643 242024751 -8663103 - MER81 DNA DNA 0 114 5 4725 157 22 24 chr2 242025265 242026185 -8661669 - MER49 LTR ERV1 -5 918 1 710 42 21 10 chr2 242026210 242026306 -8661548 + L1PA3 LINE L1 6059 6155 0 1916 129 44 41 chr2 242026806 242027169 -8660685 + THE1B LTR MaLR 1 364 0 2397 93 71 42 chr2 242027169 242027516 -8660338 + THE1B-int LTR MaLR 1 363 -1217 2347 98 3 0 chr2 242027516 242027813 -8660041 - AluSg SINE Alu -12 298 1 2397 93 71 42 chr2 242027813 242027873 -8659981 + THE1B-int LTR MaLR 363 420 -1160 2748 58 6 0 chr2 242027992 242028355 -8659499 - L1PA10 LINE L1 -288 5880 5516 2518 265 209 20 chr2 242029909 242030920 -8656934 - L2 LINE L2 -346 2968 1767 870 154 51 72 chr2 242031033 242031228 -8656626 - MER46A DNA MER2_type 0 236 46 1569 254 8 15 chr2 242031405 242031885 -8655969 + L1M2c LINE L1 1369 1845 -4944 * 6614 191 44 38 chr2 242031880 242034714 -8653140 + L1MA6 LINE L1 2384 5245 -2320 5293 154 15 31 chr2 242034709 242035321 -8652533 + L1MA6 LINE L1 6063 6683 -1036 * 1648 167 7 52 chr2 242035321 242035627 -8652227 + AluSx SINE Alu 1 292 -20 5293 154 15 31 chr2 242035627 242036674 -8651180 + L1MA6 LINE L1 6683 7695 -24 397 113 0 0 chr2 242036683 242036745 -8651109 - MER46A DNA MER2_type -171 65 4 909 241 82 36 chr2 242036754 242038048 -8649806 - L1MC5 LINE L1 -132 7829 6451 339 273 85 34 chr2 242038062 242038238 -8649616 + L1ME4a LINE L1 5936 6120 -1 2313 102 7 3 chr2 242038267 242038572 -8649282 + AluSx SINE Alu 1 306 -6 2428 92 0 3 chr2 242039098 242039412 -8648442 - AluSq SINE Alu 0 313 1 365 263 125 31 chr2 242039996 242040156 -8647698 - MER104 DNA Tc2 -5 175 1 1681 186 52 8 chr2 242041546 242041932 -8645922 - Tigger6 DNA MER2_type 0 1597 1195 417 193 0 0 chr2 242041928 242042011 -8645843 - Tigger6 DNA MER2_type -566 1031 949 * 1623 159 86 23 chr2 242042002 242042386 -8645468 - Tigger6 DNA MER2_type -674 409 2 505 328 108 41 chr2 242042808 242043415 -8644439 - L2 LINE L2 -5 3267 2630 2184 236 98 27 chr2 242043468 242044720 -8643134 - L1ME1 LINE L1 -5 6161 4815 550 209 127 0 chr2 242044730 242044864 -8642990 - MER58C DNA MER1_type -37 178 28 848 223 83 4 chr2 242044874 242045116 -8642738 - L1ME1 LINE L1 -1347 4799 4539 2275 82 31 0 chr2 242045124 242045417 -8642437 + AluY SINE Alu 1 302 -9 1091 116 12 23 chr2 242045417 242045589 -8642265 + AluSg/x SINE Alu 134 303 -9 680 222 62 27 chr2 242045589 242045846 -8642008 - L1ME1 LINE L1 -1603 4543 4278 4469 88 19 21 chr2 242045885 242046088 -8641766 + L1PB1 LINE L1 5496 5698 -453 2432 65 0 10 chr2 242046088 242046395 -8641459 - AluY SINE Alu -7 304 1 4469 88 19 21 chr2 242046395 242046490 -8641364 + L1PB1 LINE L1 5698 5792 -359 402 21 0 0 chr2 242046490 242046537 -8641317 + (TG)n Simple_repeat Simple_repeat 1 47 0 4469 88 19 21 chr2 242046537 242046887 -8640967 + L1PB1 LINE L1 5792 6143 -8 225 0 0 0 chr2 242046960 242046985 -8640869 + (A)n Simple_repeat Simple_repeat 1 25 0 2398 93 3 0 chr2 242046993 242047294 -8640560 + AluSx SINE Alu 1 302 -10 2654 202 39 30 chr2 242047294 242047977 -8639877 + L1MB7 LINE L1 5482 6173 -11 22 0 0 0 chr2 242049083 242049105 -8638749 + AT_rich Low_complexity Low_complexity 1 22 0 257 268 0 24 chr2 242050088 242050170 -8637684 - MER5B DNA MER1_type -16 162 83 229 239 55 110 chr2 242050176 242050285 -8637569 - MER91C DNA MER1_type 0 140 38 390 245 59 10 chr2 242050310 242050412 -8637442 + MER91B DNA MER1_type 83 189 -1 557 209 139 6 chr2 242050594 242050752 -8637102 - MIR SINE MIR -1 261 83 2172 124 0 0 chr2 242052844 242053135 -8634719 - AluSx SINE Alu -21 291 1 265 306 102 0 chr2 242053598 242053719 -8634135 + MIR SINE MIR 104 241 -21 248 353 86 7 chr2 242055383 242055574 -8632280 + MIR SINE MIR 6 208 -54 2146 116 0 10 chr2 242056687 242056989 -8630865 - AluSx SINE Alu -13 299 1 195 245 255 10 chr2 242057231 242057329 -8630525 - L3 LINE CR1 -670 907 786 352 271 129 29 chr2 242058216 242058356 -8629498 + MIR3 SINE MIR 9 162 -46 2195 109 26 0 chr2 242058452 242058756 -8629098 - AluSx SINE Alu 0 312 1 336 64 0 0 chr2 242058862 242058909 -8628945 + (CA)n Simple_repeat Simple_repeat 2 48 0 623 297 25 13 chr2 242058982 242059221 -8628633 - L1ME LINE L1 -307 5814 5573 280 287 114 20 chr2 242059830 242060032 -8627822 - L1ME LINE L1 -1300 4846 4626 2441 155 66 45 chr2 242060552 242061324 -8626530 + MER51A LTR ERV1 1 626 -8 1299 182 56 0 chr2 242061346 242061577 -8626277 + AluJo SINE Alu 31 274 -38 201 74 0 0 chr2 242061588 242061615 -8626239 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 281 220 23 45 chr2 242061635 242061767 -8626087 + A-rich Low_complexity Low_complexity 3 131 0 273 325 115 0 chr2 242063528 242063685 -8624169 + L1ME LINE L1 61 235 -5884 261 234 90 0 chr2 242063781 242063892 -8623962 + L1ME LINE L1 383 503 -5616 478 224 158 38 chr2 242063990 242064173 -8623681 - MER58C DNA MER1_type -9 206 2 238 229 0 0 chr2 242064322 242064383 -8623471 + L1ME LINE L1 604 664 -5455 1017 182 91 57 chr2 242064396 242064693 -8623161 + L1MA7 LINE L1 5985 6291 0 510 287 61 15 chr2 242064774 242065093 -8622761 + L1ME LINE L1 557 1053 -4889 1294 164 0 14 chr2 242065104 242065324 -8622530 + AluSg/x SINE Alu 82 298 -12 1100 214 91 67 chr2 242065376 242065540 -8622314 - MER2 DNA MER2_type 0 345 186 705 473 87 0 chr2 242065540 242065815 -8622039 - AluJo SINE Alu -1 301 3 1100 214 91 67 chr2 242065815 242065981 -8621873 - MER2 DNA MER2_type -159 186 7 2004 263 86 17 chr2 242065999 242066976 -8620878 + L1ME LINE L1 1175 2218 -4092 750 241 46 0 chr2 242066990 242067251 -8620603 + L1ME LINE L1 3140 3412 -2717 2418 206 55 97 chr2 242067289 242067374 -8620480 + L1M4 LINE L1 2317 2404 -3742 1635 172 0 40 chr2 242067374 242067671 -8620183 + AluJo SINE Alu 6 290 -22 2418 206 55 97 chr2 242067671 242068538 -8619316 + L1M4 LINE L1 2404 3216 -2930 1513 158 40 0 chr2 242068538 242068785 -8619069 + AluJb SINE Alu 53 309 -3 2418 206 55 97 chr2 242068785 242068969 -8618885 + L1M4 LINE L1 3216 3406 -2740 26 30 0 0 chr2 242069537 242069570 -8618284 + AT_rich Low_complexity Low_complexity 1 33 0 2187 160 0 58 chr2 242069830 242070243 -8617611 + MLT1B LTR MaLR 2 390 0 384 260 53 30 chr2 242070558 242070727 -8617127 + L1ME4a LINE L1 5945 6117 -4 304 165 0 25 chr2 242070818 242070897 -8616957 + (CATA)n Simple_repeat Simple_repeat 1 77 0 1284 130 149 23 chr2 242071063 242071324 -8616530 + AluJo SINE Alu 1 294 -8 310 227 223 2 chr2 242071368 242071474 -8616380 + MIR SINE MIR 26 148 -82 359 242 0 0 chr2 242071522 242071613 -8616241 - L1M4 LINE L1 -3143 3003 2913 374 258 88 71 chr2 242071899 242072094 -8615760 + L1ME LINE L1 19 222 -5897 1900 188 14 19 chr2 242072094 242072461 -8615393 + MLT1A1 LTR MaLR 1 365 0 374 258 88 71 chr2 242072461 242072560 -8615294 + L1ME LINE L1 222 318 -5801 1917 221 78 98 chr2 242072566 242073345 -8614509 - MER21B LTR ERV1 -99 764 1 878 314 82 48 chr2 242073355 242073855 -8613999 + L1ME LINE L1 324 840 -5279 267 247 67 0 chr2 242075683 242075772 -8612082 + L1ME LINE L1 4107 4201 -1928 22 35 0 0 chr2 242075811 242075840 -8612014 + AT_rich Low_complexity Low_complexity 1 29 0 436 266 41 32 chr2 242076492 242076710 -8611144 + L1ME LINE L1 4610 4829 -1300 1244 227 73 50 chr2 242077144 242077584 -8610270 + L1MC4 LINE L1 7593 8042 0 27 0 0 0 chr2 242078009 242078036 -8609818 + AT_rich Low_complexity Low_complexity 1 27 0 21 71 0 0 chr2 242078778 242078820 -8609034 + AT_rich Low_complexity Low_complexity 1 42 0 1105 157 8 81 chr2 242079688 242079923 -8607931 + MER20 DNA MER1_type 1 218 -1 1628 93 0 14 chr2 242083624 242083838 -8604016 + AluSg/x SINE Alu 81 291 -19 785 188 71 0 chr2 242085830 242085984 -8601870 + FRAM SINE Alu 2 166 0 2153 163 13 40 chr2 242086307 242086756 -8601098 + L1MB7 LINE L1 5743 6179 -5 216 176 20 0 chr2 242088405 242088456 -8599398 + MER5C DNA MER1_type 73 124 -200 450 191 0 48 chr2 242088465 242088570 -8599284 + MER5C DNA MER1_type 225 324 0 7609 19 9 0 chr2 242089183 242090720 -8597134 + L1PA3 LINE L1 4643 6186 0 583 233 41 104 chr2 242090735 242090896 -8596958 + L1ME LINE L1 3599 3769 -2377 2425 119 5 22 chr2 242090896 242091266 -8596588 + THE1B LTR MaLR 1 364 0 11120 102 16 1 chr2 242091266 242092823 -8595031 + THE1B-int LTR MaLR 1 1580 0 2311 122 8 27 chr2 242092825 242093194 -8594660 + THE1B LTR MaLR 3 364 0 583 233 41 104 chr2 242093194 242093298 -8594556 + L1ME LINE L1 3769 3851 -2295 2463 179 31 4 chr2 242093300 242093781 -8594073 + L1MB3 LINE L1 5685 6178 -5 1943 153 0 3 chr2 242093810 242094098 -8593756 + AluJb SINE Alu 1 287 -25 6272 20 7 4 chr2 242094245 242095006 -8592848 + L1PA3 LINE L1 5399 6161 0 901 237 96 39 chr2 242096895 242097207 -8590647 - MER46C DNA MER2_type -6 332 3 22 0 0 0 chr2 242097870 242097892 -8589962 + AT_rich Low_complexity Low_complexity 1 22 0 272 332 129 42 chr2 242097975 242098168 -8589686 + MIR SINE MIR 28 237 -25 570 186 0 37 chr2 242098956 242099234 -8588620 + (TTATA)n Simple_repeat Simple_repeat 1 267 0 378 246 0 37 chr2 242099291 242099478 -8588376 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 7955 132 9 43 chr2 242099903 242100814 -8587040 + Tigger2 DNA MER2_type 1338 2278 -440 2214 125 0 3 chr2 242100814 242101125 -8586729 - AluSg SINE Alu 0 310 1 7955 132 9 43 chr2 242101125 242101389 -8586465 + Tigger2 DNA MER2_type 2278 2459 -259 2432 77 10 3 chr2 242101389 242101699 -8586155 - AluSq SINE Alu 0 313 2 7955 132 9 43 chr2 242101699 242101951 -8585903 + Tigger2 DNA MER2_type 2459 2718 0 1674 186 118 10 chr2 242101955 242102472 -8585382 + L1ME LINE L1 4342 4914 -1232 2009 189 16 20 chr2 242102501 242102952 -8584902 + L1MC3 LINE L1 7325 7773 -12 1169 183 63 83 chr2 242102953 242103255 -8584599 + L1ME LINE L1 5193 5499 -667 2218 162 70 2 chr2 242103255 242103657 -8584197 + MSTB1 LTR MaLR 4 432 0 1169 183 63 83 chr2 242103657 242103763 -8584091 + L1ME LINE L1 5499 5594 -572 2461 83 0 3 chr2 242103763 242104065 -8583789 + AluSc SINE Alu 3 303 -6 1169 183 63 83 chr2 242104065 242104137 -8583717 + L1ME LINE L1 5594 5666 -500 262 323 0 31 chr2 242104142 242104269 -8583585 + MER74B LTR ERVL 56 178 -444 * 438 273 40 0 chr2 242104255 242104405 -8583449 + MER74B LTR ERVL 308 463 -159 1330 228 97 33 chr2 242104466 242104922 -8582932 - MLT2F LTR ERVL 0 663 179 1549 186 74 3 chr2 242104962 242105247 -8582607 + AluJb SINE Alu 1 305 -7 1837 233 27 77 chr2 242105379 242105514 -8582340 - L1M4 LINE L1 -2191 3955 3815 2304 186 25 12 chr2 242105514 242105707 -8582147 - L1MB3 LINE L1 -8 6175 5986 5133 82 9 3 chr2 242105707 242106394 -8581460 - LTR8 LTR ERV1 0 691 1 2304 186 25 12 chr2 242106394 242106685 -8581169 - L1MB3 LINE L1 -197 5986 5685 1837 233 27 77 chr2 242106685 242107407 -8580447 - L1M4 LINE L1 -2331 3815 3141 1825 98 66 16 chr2 242108266 242108571 -8579283 - THE1B LTR MaLR -44 320 1 1857 168 68 72 chr2 242109868 242110296 -8577558 - MSTB LTR MaLR 0 426 1 9655 155 27 6 chr2 242110297 242111914 -8575940 - MSTB-int LTR MaLR 0 1651 1 1761 171 79 8 chr2 242111963 242112342 -8575512 - MSTA LTR MaLR -22 406 1 377 310 61 61 chr2 242112485 242112911 -8574943 - L1MC4a LINE L1 -44 6077 5652 370 262 13 73 chr2 242113045 242113297 -8574557 - MER74B LTR ERVL -162 460 16 999 250 36 21 chr2 242113325 242113489 -8574365 - L1MC4a LINE L1 -511 5655 5495 1895 189 64 5 chr2 242113489 242113897 -8573957 - MSTB1 LTR MaLR 0 432 1 999 250 36 21 chr2 242113897 242114064 -8573790 - L1MC4a LINE L1 -671 5495 5319 1381 203 9 3 chr2 242114081 242114401 -8573453 - L1MC3 LINE L1 0 7785 7464 2201 61 48 7 chr2 242114402 242114696 -8573158 - AluY SINE Alu -5 306 1 839 197 16 6 chr2 242114705 242114888 -8572966 - Tigger2 DNA MER2_type -623 2095 1911 * 1948 175 75 0 chr2 242114856 242115245 -8572609 - Tigger2 DNA MER2_type -1063 1655 1238 2332 239 32 65 chr2 242115275 242115581 -8572273 - L1MC4a LINE L1 -2025 4121 3807 2322 154 68 17 chr2 242115581 242116049 -8571805 - L1MB3 LINE L1 -5 6178 5687 2332 239 32 65 chr2 242116049 242116718 -8571136 - L1MC4a LINE L1 -2339 3807 3178 1255 159 40 0 chr2 242117110 242117336 -8570518 - MSTB LTR MaLR 0 426 192 493 133 0 0 chr2 242117340 242117423 -8570431 - L1PA10 LINE L1 0 6168 6086 25004 87 14 3 chr2 242117454 242122008 -8565846 - L1PA7 LINE L1 -2 6152 1553 877 174 87 0 chr2 242122019 242122191 -8565663 - MSTB LTR MaLR -239 187 1 24 0 0 0 chr2 242124337 242124361 -8563493 + AT_rich Low_complexity Low_complexity 1 24 0 256 322 34 10 chr2 242124588 242124796 -8563058 - L1MC/D LINE L1 -1907 5901 5689 242 277 81 25 chr2 242124888 242125173 -8562681 - L1MC/D LINE L1 -1578 4568 4268 211 274 0 0 chr2 242126344 242126395 -8561459 + (TG)n Simple_repeat Simple_repeat 1 51 0 420 167 0 0 chr2 242126516 242126582 -8561272 - MSTB1 LTR MaLR -360 72 7 7345 72 7 0 chr2 242127129 242128891 -8558963 - L1PA6 LINE L1 -6 6148 4382 360 319 65 16 chr2 242128891 242129085 -8558769 - L1MC5 LINE L1 -157 7885 7609 524 178 0 85 chr2 242129086 242129215 -8558639 + L1M4 LINE L1 4792 4909 -1237 1772 202 18 23 chr2 242129384 242129825 -8558029 - L1MC3 LINE L1 -17 7768 7330 1266 205 191 4 chr2 242129834 242130341 -8557513 - L1 LINE L1 -1198 4948 4337 1018 201 35 0 chr2 242130341 242130570 -8557284 - Tigger2 DNA MER2_type -1 2717 2481 4526 115 29 12 chr2 242130570 242131333 -8556521 + L1PA16 LINE L1 5380 6155 -11 12496 163 35 12 chr2 242131340 242132998 -8554856 - Tigger2 DNA MER2_type -265 2453 720 693 66 0 0 chr2 242132998 242133089 -8554765 + (TTCC)n Simple_repeat Simple_repeat 3 93 0 12496 163 35 12 chr2 242133089 242133827 -8554027 - Tigger2 DNA MER2_type -1998 720 1 2771 249 28 58 chr2 242133827 242134340 -8553514 - L1 LINE L1 -1807 4339 3812 2319 166 69 7 chr2 242134340 242134805 -8553049 - L1MB3 LINE L1 -5 6178 5685 2771 249 28 58 chr2 242134805 242135489 -8552365 - L1 LINE L1 -2334 3812 3178 1311 151 39 0 chr2 242135882 242136114 -8551740 - MSTB LTR MaLR 0 426 186 508 119 0 0 chr2 242136114 242136198 -8551656 - L1PA10 LINE L1 0 6168 6085 6657 67 7 1 chr2 242136232 242137657 -8550197 - L1PA7 LINE L1 -3 6151 4725 19835 106 29 1 chr2 242137806 242141087 -8546767 - L1P LINE L1 -1222 4924 1553 866 213 82 0 chr2 242141135 242141318 -8546536 - MSTB LTR MaLR -228 198 1 230 346 24 0 chr2 242143509 242143717 -8544137 - L1MC/D LINE L1 -1907 5901 5689 386 272 121 18 chr2 242143809 242144140 -8543714 - L1MC/D LINE L1 -1578 4568 4204 211 274 0 0 chr2 242145269 242145320 -8542534 + (TG)n Simple_repeat Simple_repeat 1 51 0 354 103 241 0 chr2 242145441 242145499 -8542355 - MSTB LTR MaLR -354 72 1 544 272 77 72 chr2 242145871 242146261 -8541593 - L1MC5 LINE L1 -29 7932 7541 382 188 60 103 chr2 242146217 242146334 -8541520 + L1M4 LINE L1 4793 4904 -1242 * 1544 127 0 0 chr2 242146334 242146546 -8541308 + MER83-int LTR ERV1 4063 4274 -11 1823 133 40 3 chr2 242146547 242146849 -8541005 + MER83 LTR ERV1 1 313 -135 1059 112 84 17 chr2 242147031 242147209 -8540645 + MER83 LTR ERV1 259 448 0 19532 152 24 13 chr2 242147209 242148793 -8539061 - L1M1 LINE L1 -4190 3375 1810 357 43 0 0 chr2 242148793 242148840 -8539014 + (TC)n Simple_repeat Simple_repeat 2 48 0 19532 152 24 13 chr2 242148840 242150209 -8537645 - L1M1 LINE L1 -5755 1810 458 1977 136 25 0 chr2 242150209 242150489 -8537365 + AluSx SINE Alu 2 288 -24 234 0 0 0 chr2 242150493 242150519 -8537335 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 19532 152 24 13 chr2 242150519 242150812 -8537042 - L1M1 LINE L1 -7109 456 87 1848 154 60 0 chr2 242150816 242151115 -8536739 - Tigger2 DNA MER2_type -990 1728 1412 1142 86 20 0 chr2 242151110 242151261 -8536593 - THE1B LTR MaLR -208 156 3 * 11770 92 11 1 chr2 242151263 242152826 -8535028 - THE1B-int LTR MaLR 0 1580 1 2337 138 5 24 chr2 242152826 242153197 -8534657 - THE1B LTR MaLR 0 364 1 1790 268 34 15 chr2 242153197 242153812 -8534042 - L1MC/D LINE L1 -2378 3768 3142 2440 78 0 13 chr2 242154377 242154685 -8533169 - AluY SINE Alu -7 304 1 406 219 9 68 chr2 242155164 242155281 -8532573 - FLAM_A SINE Alu -18 115 26 5304 156 14 7 chr2 242155598 242155886 -8531968 - HSMAR2 DNA Mariner -385 917 633 2328 105 3 0 chr2 242155886 242156191 -8531663 - AluSp SINE Alu -7 306 1 5304 156 14 7 chr2 242156191 242156811 -8531043 - HSMAR2 DNA Mariner -669 633 2 212 317 0 0 chr2 242157690 242157750 -8530104 + (TG)n Simple_repeat Simple_repeat 2 61 0 348 301 32 73 chr2 242158201 242158541 -8529313 - L1MC5 LINE L1 -49 7912 7636 1241 245 56 25 chr2 242158543 242158951 -8528903 + L1M4 LINE L1 4791 5211 -935 4137 173 26 25 chr2 242159013 242159514 -8528340 - Ricksha DNA DNA -8 3238 2734 2089 145 0 0 chr2 242159514 242159818 -8528036 - AluSx SINE Alu -8 304 1 4137 173 26 25 chr2 242159818 242160130 -8527724 - Ricksha DNA DNA -512 2734 2424 673 161 6 95 chr2 242160142 242160310 -8527544 - Ricksha DNA DNA -1101 153 1 2068 141 10 0 chr2 242160731 242161036 -8526818 + AluSx SINE Alu 1 308 -4 401 260 19 0 chr2 242161223 242161327 -8526527 - MER81 DNA DNA -4 110 5 5134 155 19 29 chr2 242161841 242162768 -8525086 - MER49 LTR ERV1 -5 918 1 1903 206 53 15 chr2 242163175 242163587 -8524267 - MSTB1 LTR MaLR -4 428 1 845 172 70 18 chr2 242163587 242163814 -8524040 - L1MC/D LINE L1 -2546 5496 5258 2094 191 11 35 chr2 242163849 242163940 -8523914 - L1MC3 LINE L1 -11 7774 7682 2183 128 0 0 chr2 242163940 242164236 -8523618 - AluSx SINE Alu -12 300 5 2094 191 11 35 chr2 242164236 242164605 -8523249 - L1MC3 LINE L1 -103 7682 7325 1567 208 146 8 chr2 242164640 242165141 -8522713 - L1MC/D LINE L1 -1239 4907 4338 11380 143 14 20 chr2 242165141 242167013 -8520841 - Tigger2 DNA MER2_type 0 2718 859 4268 187 31 8 chr2 242167450 242167545 -8520309 - Tigger2 DNA MER2_type -1831 887 796 495 0 0 0 chr2 242167545 242167600 -8520254 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 4268 187 31 8 chr2 242167600 242168366 -8519488 - Tigger2 DNA MER2_type -1922 796 6 378 254 49 8 chr2 242168593 242168715 -8519139 - Tigger2 DNA MER2_type -2585 133 7 1295 278 47 22 chr2 242168722 242169212 -8518642 - L1MC/D LINE L1 -1809 4337 3836 1383 176 15 18 chr2 242169229 242169425 -8518429 - L1MB3 LINE L1 -5 6178 5982 5211 86 9 3 chr2 242169425 242170112 -8517742 - LTR8 LTR ERV1 0 691 1 1383 176 15 18 chr2 242170112 242170187 -8517667 - L1MB3 LINE L1 -201 5982 5908 2884 139 18 0 chr2 242170189 242170642 -8517212 - MSTA-int LTR MaLR -1190 461 1 2087 170 82 5 chr2 242170677 242171066 -8516788 - MSTA LTR MaLR -9 419 1 323 295 63 55 chr2 242171321 242171575 -8516279 - L1MC4a LINE L1 -1831 5977 5722 254 286 14 0 chr2 242171639 242171709 -8516145 + MLT2F LTR ERVL 593 663 0 470 220 37 102 chr2 242171766 242172021 -8515833 - MER74A LTR ERVL -156 402 70 1079 258 79 25 chr2 242172041 242172210 -8515644 - L1MC4a LINE L1 -505 5661 5503 2051 185 58 7 chr2 242172210 242172621 -8515233 - MSTB1 LTR MaLR 0 432 1 1079 258 79 25 chr2 242172621 242172910 -8514944 - L1MC4a LINE L1 -663 5503 5188 5249 39 0 0 chr2 242172913 242173531 -8514323 - L1PA4 LINE L1 0 6155 5538 4347 33 1 0 chr2 242173531 242174210 -8513644 + L1PA4 LINE L1 4876 5555 -600 2090 204 7 13 chr2 242174204 242174324 -8513530 - L1MC3 LINE L1 -10 7775 7656 * 5433 56 0 0 chr2 242174324 242174983 -8512871 - L1PA6 LINE L1 -4 6150 5492 2090 204 7 13 chr2 242174983 242175317 -8512537 - L1MC3 LINE L1 -129 7656 7324 1853 190 117 10 chr2 242175344 242175865 -8511989 - L1MC4a LINE L1 -1232 4914 4338 4492 146 34 31 chr2 242175865 242175944 -8511910 - Tigger2 DNA MER2_type 0 2718 2641 2090 135 0 3 chr2 242175944 242176248 -8511606 - AluSx SINE Alu -8 304 2 4492 146 34 31 chr2 242176248 242176974 -8510880 - Tigger2 DNA MER2_type -77 2641 1911 1971 141 23 3 chr2 242176972 242177278 -8510576 - Tigger2 DNA MER2_type -1095 1623 1312 * 340 334 35 57 chr2 242179449 242179792 -8508062 - L1MC4a LINE L1 -190 5931 5621 458 276 157 19 chr2 242179801 242180222 -8507632 - L1MC4a LINE L1 -1578 4568 4090 227 255 0 0 chr2 242181285 242181336 -8506518 + (TG)n Simple_repeat Simple_repeat 1 51 0 465 181 0 0 chr2 242181458 242181530 -8506324 - MSTB1 LTR MaLR -360 72 1 260 231 110 11 chr2 242181891 242181982 -8505872 - L1MC5 LINE L1 -29 7932 7833 646 234 31 26 chr2 242182798 242182990 -8504864 - L1MB8 LINE L1 -1 6177 5985 759 261 120 28 chr2 242182991 242183037 -8504817 + L1M4 LINE L1 3629 3669 -2477 1179 291 43 20 chr2 242183037 242183528 -8504326 + MLT1D LTR MaLR 4 505 0 759 261 120 28 chr2 242183528 242183807 -8504047 + L1M4 LINE L1 3669 3984 -2162 482 230 164 13 chr2 242184069 242184092 -8503762 + MIR SINE MIR 11 29 -233 2353 102 0 0 chr2 242184092 242184385 -8503469 + AluSx SINE Alu 1 293 -19 482 230 164 13 chr2 242184385 242184513 -8503341 + MIR SINE MIR 29 185 -77 21 0 0 0 chr2 242184561 242184582 -8503272 + AT_rich Low_complexity Low_complexity 1 21 0 231 94 38 19 chr2 242184615 242184668 -8503186 + (TA)n Simple_repeat Simple_repeat 2 55 0 977 171 0 0 chr2 242184677 242184829 -8503025 + FRAM SINE Alu 2 153 -23 201 39 0 0 chr2 242185338 242185364 -8502490 + (TAA)n Simple_repeat Simple_repeat 3 28 0 229 260 0 0 chr2 242185368 242185418 -8502436 - MIR SINE MIR -11 251 202 409 329 66 9 chr2 242188555 242188768 -8499086 + MIR SINE MIR 28 252 -10 230 184 0 0 chr2 242189879 242189917 -8497937 + MIR SINE MIR 12 49 -213 494 220 94 118 chr2 242190126 242190297 -8497557 + MIR SINE MIR 12 178 -84 2355 61 4 0 chr2 242190297 242190619 -8497235 - AluY SINE Alu 0 325 3 494 220 94 118 chr2 242190619 242190701 -8497153 + MIR SINE MIR 178 260 -2 437 228 138 0 chr2 242191187 242191332 -8496522 - MER20 DNA MER1_type 0 219 55 2242 107 3 3 chr2 242191534 242191844 -8496010 + AluSg SINE Alu 1 310 0 1232 190 114 64 chr2 242191917 242192339 -8495515 - LTR7 LTR ERV1 -7 443 1 620 163 30 37 chr2 242192637 242192772 -8495082 - LTR16C LTR ERVL -4 487 354 2049 119 11 0 chr2 242192794 242193079 -8494775 + AluSg SINE Alu 2 289 -21 518 164 142 37 chr2 242193095 242193229 -8494625 - LTR7 LTR ERV1 0 450 303 782 119 87 0 chr2 242193722 242193848 -8494006 - LTR7 LTR ERV1 -313 137 1 3658 108 22 0 chr2 242193848 242194393 -8493461 - HERVH LTR ERV1 0 7713 7157 1464 195 4 0 chr2 242194386 242194653 -8493201 - HERVH LTR ERV1 -1697 6016 5749 * 6462 114 20 11 chr2 242194650 242195989 -8491865 - HERVH LTR ERV1 -2287 4246 3634 738 127 0 18 chr2 242195995 242196105 -8491749 - LTR7 LTR ERV1 0 450 343 438 63 0 0 chr2 242196117 242196180 -8491674 + Alu SINE Alu 240 302 -9 2408 99 99 21 chr2 242196182 242196564 -8491290 - LTR9 LTR ERV1 -175 437 26 300 111 0 0 chr2 242196564 242196609 -8491245 + LTR7 LTR ERV1 1 45 -405 461 81 0 0 chr2 242196616 242196678 -8491176 - Alu SINE Alu -76 234 173 1007 112 17 62 chr2 242196682 242196860 -8490994 + LTR9 LTR ERV1 443 612 0 347 218 128 103 chr2 242196881 242196966 -8490888 - LTR16C LTR ERVL -159 332 251 1664 155 7 21 chr2 242196966 242197257 -8490597 + AluJo SINE Alu 3 289 -23 347 218 128 103 chr2 242197257 242197414 -8490440 - LTR16C LTR ERVL -240 251 84 293 256 128 17 chr2 242197575 242197692 -8490162 - L2 LINE L2 -272 3000 2871 1997 213 47 38 chr2 242197713 242197848 -8490006 - MER87 LTR ERV1 -11 530 398 2141 125 0 0 chr2 242197848 242198153 -8489701 + AluSx SINE Alu 1 305 -7 1997 213 47 38 chr2 242198153 242198497 -8489357 - MER87 LTR ERV1 -143 398 55 2494 139 73 39 chr2 242198718 242199157 -8488697 + LTR32 LTR ERVL 14 467 -4 673 147 74 18 chr2 242199489 242199652 -8488202 + MER53 DNA DNA 18 189 0 1908 219 73 66 chr2 242199713 242200262 -8487592 - MLT2B3 LTR ERVL 0 554 2 473 235 98 67 chr2 242200528 242200802 -8487052 + L1ME LINE L1 631 920 -5285 2218 60 43 0 chr2 242200802 242201084 -8486770 - AluY SINE Alu -17 294 1 473 235 98 67 chr2 242201084 242201167 -8486687 + L1ME LINE L1 920 999 -5206 * 966 272 75 45 chr2 242201149 242201534 -8486320 + L1ME LINE L1 1589 1992 -4404 2227 105 0 9 chr2 242201534 242201849 -8486005 - AluSx SINE Alu 0 312 1 966 272 75 45 chr2 242201849 242201933 -8485921 + L1ME LINE L1 1992 2072 -4324 518 156 0 107 chr2 242202163 242202200 -8485654 - AluJo/FRAM SINE Alu -4 308 269 1581 163 10 21 chr2 242202200 242202488 -8485366 + AluJb SINE Alu 1 285 -27 180 0 0 0 chr2 242202491 242202511 -8485343 + (TAA)n Simple_repeat Simple_repeat 2 21 0 518 156 0 107 chr2 242202511 242202591 -8485263 - AluJo/FRAM SINE Alu -45 267 200 244 131 82 82 chr2 242202694 242202755 -8485099 - AluSp SINE Alu -124 179 119 1835 154 3 7 chr2 242203327 242203625 -8484229 - AluJo SINE Alu -15 297 1 1419 246 125 29 chr2 242203782 242204115 -8483739 - MLT1G1 LTR MaLR 0 595 199 869 97 0 24 chr2 242204115 242204280 -8483574 + (GA)n Simple_repeat Simple_repeat 1 161 0 1419 246 125 29 chr2 242204280 242204434 -8483420 - MLT1G1 LTR MaLR -396 199 61 926 289 120 24 chr2 242204979 242205436 -8482418 - LTR33 LTR ERVL -20 501 1 2139 127 0 0 chr2 242205478 242205786 -8482068 - AluSq SINE Alu -5 308 1 667 267 27 21 chr2 242206249 242206436 -8481418 - MER5A DNA MER1_type -1 188 1 213 286 48 71 chr2 242206470 242206554 -8481300 + MIR3 SINE MIR 3 84 -124 234 0 0 0 chr2 242207542 242207568 -8480286 + (T)n Simple_repeat Simple_repeat 1 26 0 2154 97 0 0 chr2 242207600 242207890 -8479964 + AluSx SINE Alu 9 298 -14 234 0 0 0 chr2 242208743 242208769 -8479085 + (T)n Simple_repeat Simple_repeat 1 26 0 2154 97 0 0 chr2 242208801 242209091 -8478763 + AluSx SINE Alu 9 298 -14 209 279 0 49 chr2 242209228 242209289 -8478565 - MER5A DNA MER1_type -3 186 129 767 144 72 22 chr2 242209294 242209433 -8478421 + AluJo SINE Alu 2 147 -165 306 246 118 18 chr2 242209824 242209934 -8477920 - MIR SINE MIR -60 202 82 2001 122 30 0 chr2 242209945 242210273 -8477581 + AluSx SINE Alu 1 337 0 1422 223 8 58 chr2 242210719 242210958 -8476896 - MLT1A2 LTR MaLR 0 374 161 2341 90 0 3 chr2 242210958 242211269 -8476585 - AluSx SINE Alu 0 312 3 1422 223 8 58 chr2 242211269 242211423 -8476431 - MLT1A2 LTR MaLR -213 161 1 243 308 0 0 chr2 242211696 242211761 -8476093 + L2 LINE L2 2871 2935 -379 566 258 59 45 chr2 242211761 242212122 -8475732 - LTR16A1 LTR ERVL 0 457 3 524 252 27 84 chr2 242212127 242212227 -8475627 + L2 LINE L2 2931 3035 -278 2109 113 0 13 chr2 242212227 242212529 -8475325 - AluSx SINE Alu -14 298 1 524 252 27 84 chr2 242212529 242212690 -8475164 + L2 LINE L2 3035 3177 -136 2094 123 0 0 chr2 242212704 242213006 -8474848 - AluSc SINE Alu -7 302 1 185 0 40 0 chr2 242213010 242213035 -8474819 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 334 261 113 56 chr2 242213043 242213185 -8474669 + L2 LINE L2 3159 3308 -5 371 305 71 26 chr2 242213799 242214146 -8473708 + L1ME LINE L1 5316 5671 -450 2176 86 0 32 chr2 242214277 242214614 -8473240 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 242215044 242215065 -8472789 + AT_rich Low_complexity Low_complexity 1 21 0 2064 108 3 40 chr2 242215067 242215391 -8472463 + AluSx SINE Alu 1 312 0 193 255 0 0 chr2 242215972 242216019 -8471835 + MIR3 SINE MIR 157 203 -5 2278 104 3 0 chr2 242216099 242216407 -8471447 + AluSx SINE Alu 1 309 -3 1430 280 34 16 chr2 242216881 242217107 -8470747 - LTR16B LTR ERVL -9 455 235 2196 145 0 57 chr2 242217107 242217494 -8470360 - MLT1A1 LTR MaLR 0 365 1 1430 280 34 16 chr2 242217494 242217714 -8470140 - LTR16B LTR ERVL -229 235 1 403 258 80 31 chr2 242217746 242217909 -8469945 + MIR SINE MIR 9 179 -83 327 233 89 18 chr2 242217873 242218019 -8469835 - MIR SINE MIR 0 262 48 * 267 327 80 9 chr2 242218037 242218150 -8469704 + MIR SINE MIR 132 252 -10 2449 28 0 0 chr2 242218203 242218487 -8469367 - AluYb8 SINE Alu 0 318 35 277 286 0 13 chr2 242218709 242218786 -8469068 + MLT1L LTR MaLR 9 84 -531 645 167 133 33 chr2 242218789 242218969 -8468885 - MLT1F1 LTR MaLR -5 562 365 360 0 0 0 chr2 242219041 242219077 -8468777 + (TG)n Simple_repeat Simple_repeat 1 76 0 360 0 0 0 chr2 242219077 242219117 -8468737 + (TG)n Simple_repeat Simple_repeat 2 41 0 611 267 62 28 chr2 242219166 242219381 -8468473 - MLT1H1 LTR MaLR -289 266 76 804 251 193 13 chr2 242219469 242219852 -8468002 + MLT1L LTR MaLR 87 538 -77 350 260 17 13 chr2 242219879 242219991 -8467863 - L1MC4 LINE L1 -1339 6983 1995 363 261 0 33 chr2 242220037 242220129 -8467725 + L1MC4 LINE L1 6614 6702 -1340 537 161 35 0 chr2 242220137 242220224 -8467630 - FRAM SINE Alu -47 129 40 270 250 50 0 chr2 242220245 242220305 -8467549 - MER58 DNA MER1_type -2357 63 1 2283 101 3 0 chr2 242220806 242221112 -8466742 + AluSp SINE Alu 3 309 -4 1858 148 6 28 chr2 242221120 242221438 -8466416 + AluSx SINE Alu 1 311 -1 2212 99 3 0 chr2 242222419 242222722 -8465132 - AluSx SINE Alu -8 304 1 395 284 80 57 chr2 242223058 242223357 -8464497 - MLT1K LTR MaLR 0 588 283 2020 123 3 19 chr2 242223506 242223823 -8464031 + AluSx SINE Alu 1 312 0 218 259 0 12 chr2 242223823 242223908 -8463946 + GA-rich Low_complexity Low_complexity 2 85 0 233 295 70 47 chr2 242224288 242224417 -8463437 + MLT1K LTR MaLR 457 588 0 228 344 56 0 chr2 242224467 242224557 -8463297 + MIR SINE MIR 7 101 -161 620 226 89 42 chr2 242224557 242224596 -8463258 + MIR SINE MIR 64 100 -162 2083 112 3 7 chr2 242224596 242224891 -8462963 - AluSq SINE Alu -19 294 1 620 226 89 42 chr2 242224891 242225041 -8462813 + MIR SINE MIR 100 262 0 2154 115 0 3 chr2 242225323 242225635 -8462219 + AluSx SINE Alu 1 311 -1 1658 122 134 0 chr2 242225648 242225769 -8462085 + AluJb SINE Alu 2 105 -197 216 0 0 0 chr2 242225769 242225793 -8462061 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1658 122 134 0 chr2 242225793 242225933 -8461921 + AluJb SINE Alu 105 298 -4 2026 121 0 3 chr2 242226169 242226458 -8461396 + AluSx SINE Alu 1 288 -24 234 0 0 0 chr2 242226461 242226487 -8461367 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 905 284 36 16 chr2 242227657 242227907 -8459947 + MIR SINE MIR 8 262 0 2264 88 0 3 chr2 242227979 242228276 -8459578 - AluSx SINE Alu -16 296 1 576 296 59 92 chr2 242228416 242228872 -8458982 - L2 LINE L2 0 3272 2832 297 205 68 184 chr2 242229011 242229201 -8458653 - L1ME LINE L1 -331 5790 5623 1559 155 7 35 chr2 242229249 242229539 -8458315 - AluJb SINE Alu -30 282 1 2234 115 180 12 chr2 242230297 242230713 -8457141 - LTR19A LTR ERV1 0 486 1 578 298 19 0 chr2 242230755 242230916 -8456938 - MIR SINE MIR -24 238 75 1657 123 11 32 chr2 242231982 242232266 -8455588 - AluJo SINE Alu -34 278 1 499 215 41 8 chr2 242232536 242232657 -8455197 + MER5B DNA MER1_type 1 125 -53 231 262 33 0 chr2 242232700 242232761 -8455093 + MER5B DNA MER1_type 111 173 -5 * 459 230 79 84 chr2 242232757 242232911 -8454943 - MIR SINE MIR -40 222 68 2159 121 0 3 chr2 242232911 242233224 -8454630 - AluSx SINE Alu 0 312 1 459 230 79 84 chr2 242233224 242233247 -8454607 - MIR SINE MIR -194 68 46 223 186 57 71 chr2 242233558 242233628 -8454226 + MIR SINE MIR 100 168 -94 1741 124 36 0 chr2 242234527 242234833 -8453021 - AluSx SINE Alu 0 312 12 265 289 117 16 chr2 242234915 242235043 -8452811 + L2 LINE L2 2332 2472 -842 250 205 0 0 chr2 242236224 242236263 -8451591 + MER47A DNA MER2_type 1 39 -327 2053 119 6 22 chr2 242236263 242236574 -8451280 - AluSx SINE Alu 0 312 7 2113 75 0 0 chr2 242236588 242236907 -8450947 - AluY SINE Alu 0 319 1 1708 147 101 7 chr2 242236910 242237216 -8450638 + MER47A DNA MER2_type 30 364 -2 2198 89 7 0 chr2 242237304 242237596 -8450258 + AluSg1 SINE Alu 2 295 -14 197 77 51 0 chr2 242237596 242237635 -8450219 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 1693 149 3 14 chr2 242238287 242238576 -8449278 - AluJb SINE Alu -24 288 3 2333 211 28 12 chr2 242238611 242239104 -8448750 - LTR31 LTR ERV1 -15 604 104 269 304 61 26 chr2 242239489 242239604 -8448250 - L2 LINE L2 -18 3254 3136 845 215 52 0 chr2 242239842 242240014 -8447840 + MER5A DNA MER1_type 7 187 -2 298 304 59 30 chr2 242240036 242240171 -8447683 + MER5A DNA MER1_type 21 159 -30 2216 70 33 0 chr2 242240533 242240832 -8447022 - AluY SINE Alu -2 309 1 404 150 0 0 chr2 242240905 242240965 -8446889 + FLAM SINE Alu 62 121 -12 1820 277 134 14 chr2 242241442 242242322 -8445532 + L2 LINE L2 2165 3147 -166 2150 101 7 0 chr2 242245049 242245345 -8442509 - AluSx SINE Alu -14 298 1 1448 185 3 72 chr2 242245732 242246051 -8441803 + AluJo SINE Alu 2 298 -4 1891 173 25 23 chr2 242246216 242246615 -8441239 + L1MA4 LINE L1 5657 6056 -244 1960 140 3 0 chr2 242246645 242246945 -8440909 + AluSx SINE Alu 1 301 -11 339 207 211 24 chr2 242246945 242247153 -8440701 + L1ME4a LINE L1 5836 6082 -39 1865 134 0 11 chr2 242247751 242248035 -8439819 + AluSx SINE Alu 1 281 -31 563 276 44 11 chr2 242248744 242248925 -8438929 + MIR SINE MIR 74 260 -2 908 144 38 141 chr2 242248951 242249214 -8438640 + MER46A DNA MER2_type 1 236 0 541 70 0 23 chr2 242249707 242249793 -8438061 - AluJ/FRAM SINE Alu -1 311 228 266 242 0 15 chr2 242249963 242250029 -8437825 - L1ME LINE L1 -441 5680 5616 227 260 52 39 chr2 242250753 242250830 -8437024 - MIR SINE MIR -138 124 47 2207 82 3 0 chr2 242250844 242251155 -8436699 - AluSp SINE Alu 0 312 1 199 262 111 100 chr2 242255012 242255283 -8432571 + L3 LINE CR1 1303 1576 -1 1477 184 11 18 chr2 242256076 242256354 -8431500 - AluJb SINE Alu -36 276 1 187 250 150 0 chr2 242256529 242256589 -8431265 - MIR SINE MIR -119 143 75 263 363 30 65 chr2 242258040 242258241 -8429613 - MIR SINE MIR -50 212 19 1369 173 0 26 chr2 242258504 242258770 -8429084 + AluJo SINE Alu 35 293 -19 319 288 96 48 chr2 242261478 242261603 -8426251 + L2 LINE L2 3134 3264 -8 29 0 0 0 chr2 242263034 242263063 -8424791 + AT_rich Low_complexity Low_complexity 1 29 0 1952 105 77 0 chr2 242263128 242263413 -8424441 - AluSq SINE Alu -5 308 2 2143 93 10 13 chr2 242263421 242263721 -8424133 - AluSg SINE Alu -11 299 1 2059 92 26 20 chr2 242263725 242263892 -8423962 - AluSq SINE Alu -5 308 137 2067 114 0 19 chr2 242263892 242264209 -8423645 - AluY SINE Alu 0 311 1 2059 92 26 20 chr2 242264209 242264347 -8423507 - AluSq SINE Alu -176 137 1 2427 66 0 0 chr2 242266199 242266502 -8421352 - AluY SINE Alu -8 303 1 337 200 15 0 chr2 242266958 242267023 -8420831 + MER47A DNA MER2_type 301 366 0 2212 114 0 0 chr2 242267173 242267470 -8420384 + AluSq SINE Alu 1 297 -16 323 185 31 0 chr2 242267575 242267640 -8420214 - HsTC2 DNA Tc2 -601 1297 1231 1248 169 16 16 chr2 242267906 242268148 -8419706 - AluJo SINE Alu -59 253 12 288 0 0 0 chr2 242268955 242268987 -8418867 + (TG)n Simple_repeat Simple_repeat 1 32 0 1521 170 11 21 chr2 242268987 242269269 -8418585 - AluJb SINE Alu -33 279 1 207 434 33 0 chr2 242270103 242270225 -8417629 - L2 LINE L2 -10 3262 3137 339 368 8 0 chr2 242270900 242271017 -8416837 - MIR3 SINE MIR -13 195 78 848 146 56 0 chr2 242275749 242275893 -8411961 + FRAM SINE Alu 8 159 -17 507 134 0 0 chr2 242276186 242276268 -8411586 + (TG)n Simple_repeat Simple_repeat 2 83 0 1082 181 108 8 chr2 242276269 242276518 -8411336 - AluJb SINE Alu -27 285 12 1215 138 33 0 chr2 242276533 242276743 -8411111 - AluJb SINE Alu -5 307 91 1492 171 33 10 chr2 242276985 242277290 -8410564 - AluJb SINE Alu 0 312 1 2009 93 11 0 chr2 242277733 242278012 -8409842 + AluY SINE Alu 27 308 -3 352 206 152 0 chr2 242278659 242278751 -8409103 - MLT1H LTR MaLR -5 544 439 180 0 0 0 chr2 242278811 242278831 -8409023 + (CAAG)n Simple_repeat Simple_repeat 3 22 0 2334 65 0 3 chr2 242278871 242279163 -8408691 - AluY SINE Alu -19 292 2 2034 125 0 0 chr2 242279825 242280122 -8407732 + AluJb SINE Alu 1 297 -15 550 98 98 0 chr2 242280124 242280216 -8407638 - L1MB5 LINE L1 -15 6159 6059 208 181 19 57 chr2 242280970 242281075 -8406779 + (TAA)n Simple_repeat Simple_repeat 3 103 0 196 292 150 53 chr2 242281120 242281233 -8406621 + L3 LINE CR1 1426 1549 -28 349 295 105 14 chr2 242281859 242282069 -8405785 + L1MC4 LINE L1 7813 8041 -1 * 667 229 91 14 chr2 242282063 242282273 -8405581 + L1ME1 LINE L1 5922 6147 -19 1997 105 34 0 chr2 242282398 242282692 -8405162 - AluSq SINE Alu -9 304 1 1818 124 25 41 chr2 242283097 242283411 -8404443 - AluSx SINE Alu -3 309 1 1348 196 15 4 chr2 242283426 242283686 -8404168 - AluJb SINE Alu -49 263 1 900 134 6 58 chr2 242283693 242283901 -8403953 - AluJb SINE Alu 0 320 122 186 275 0 0 chr2 242284079 242284148 -8403706 + (TATG)n Simple_repeat Simple_repeat 2 70 0 2387 73 3 0 chr2 242284396 242284698 -8403156 - AluSg SINE Alu -7 303 1 658 232 157 17 chr2 242285003 242285182 -8402672 - L2 LINE L2 -231 3082 2929 1895 144 3 7 chr2 242285182 242285480 -8402374 + AluJo SINE Alu 1 297 -15 658 232 157 17 chr2 242285480 242285614 -8402240 - L2 LINE L2 -384 2929 2737 490 319 90 45 chr2 242285725 242285879 -8401975 - L2 LINE L2 -18 3254 3108 1773 127 80 0 chr2 242285879 242286155 -8401699 + AluSg SINE Alu 1 298 -12 490 319 90 45 chr2 242286155 242286357 -8401497 - L2 LINE L2 -164 3108 2882 1813 124 4 0 chr2 242286482 242286741 -8401113 + AluSq SINE Alu 1 260 -53 564 167 0 0 chr2 242286741 242286843 -8401011 + AluSg/x SINE Alu 211 312 0 1706 166 10 40 chr2 242287758 242288060 -8399794 + AluJo SINE Alu 4 296 -16 719 178 0 44 chr2 242288169 242288304 -8399550 - FLAM_C SINE Alu -4 129 1 2052 115 20 3 chr2 242288945 242289240 -8398614 + AluSx SINE Alu 1 300 -12 1130 160 146 4 chr2 242289799 242290067 -8397787 - MER33 DNA MER1_type -18 306 1 2430 90 10 0 chr2 242290084 242290384 -8397470 - AluSx SINE Alu -9 303 1 571 244 86 64 chr2 242290955 242291189 -8396665 - MLT1L LTR MaLR -356 259 21 2553 73 0 0 chr2 242291421 242291722 -8396132 + AluSp SINE Alu 1 301 -12 369 259 92 30 chr2 242291959 242292090 -8395764 + MIR SINE MIR 119 257 -5 208 345 78 26 chr2 242292776 242292967 -8394887 - L2 LINE L2 -250 3022 2822 1119 145 20 182 chr2 242293092 242293444 -8394410 - AluJb SINE Alu -7 295 1 2083 131 0 7 chr2 242293522 242293813 -8394041 + AluJb SINE Alu 9 297 -15 2464 109 0 0 chr2 242294858 242295169 -8392685 - AluSx SINE Alu -1 311 1 2391 82 16 13 chr2 242295270 242295574 -8392280 - AluSg SINE Alu -3 307 3 227 151 0 94 chr2 242295793 242295846 -8392008 + L1ME4a LINE L1 5396 5443 -678 2435 99 3 0 chr2 242295875 242296187 -8391667 - AluSq SINE Alu 0 313 1 1038 189 246 105 chr2 242296222 242296444 -8391410 + L1MB3 LINE L1 5254 5443 -799 312 23 0 23 chr2 242296444 242296488 -8391366 + MADE1 DNA Mariner 1 43 -37 1854 137 0 0 chr2 242296488 242296737 -8391117 - AluJb SINE Alu -62 250 2 1038 189 246 105 chr2 242296737 242296909 -8390945 + L1MB3 LINE L1 5442 5754 -488 677 211 20 0 chr2 242296918 242297070 -8390784 + L1MD2 LINE L1 6203 6357 -2 842 249 80 99 chr2 242297071 242297553 -8390301 + L1ME4a LINE L1 5506 5975 -146 1527 157 12 102 chr2 242297553 242297729 -8390125 - AluJb SINE Alu -17 295 160 1470 142 4 30 chr2 242297729 242297962 -8389892 - AluJb SINE Alu 0 312 86 1527 157 12 102 chr2 242297962 242298109 -8389745 - AluJb SINE Alu -152 160 1 842 249 80 99 chr2 242298109 242298249 -8389605 + L1ME4a LINE L1 5975 6116 -5 1781 191 10 5 chr2 242300971 242301364 -8386490 + L1MB3 LINE L1 5782 6176 -7 300 329 73 0 chr2 242301404 242301502 -8386352 + L1MC/D LINE L1 5517 5629 -492 1902 73 34 0 chr2 242301502 242301563 -8386291 + AluY SINE Alu 64 121 -190 459 0 0 0 chr2 242301563 242301614 -8386240 + (CA)n Simple_repeat Simple_repeat 2 52 0 1902 73 34 0 chr2 242301614 242301786 -8386068 + AluY SINE Alu 121 305 -6 300 329 73 0 chr2 242301786 242301824 -8386030 + L1MC/D LINE L1 5629 5663 -458 304 254 14 0 chr2 242301836 242301907 -8385947 + L1MC/D LINE L1 5695 5766 -2042 369 129 0 3 chr2 242302095 242302320 -8385534 + AluSx SINE Alu 1 291 -11 1938 165 0 0 chr2 242302638 242302929 -8384925 - AluSx SINE Alu -15 297 7 2315 96 3 0 chr2 242302946 242303239 -8384615 - AluSp SINE Alu -19 294 1 376 230 10 20 chr2 242303270 242303370 -8384484 - L1MC5 LINE L1 -48 7913 7815 540 268 180 42 chr2 242303370 242303691 -8384163 - L2 LINE L2 -77 3236 2961 1983 144 16 16 chr2 242303691 242303997 -8383857 + AluJb SINE Alu 1 306 -6 540 268 180 42 chr2 242303997 242304188 -8383666 - L2 LINE L2 -352 2961 2648 263 234 65 0 chr2 242304441 242304518 -8383336 - MER112 DNA MER1_type -31 229 148 2109 91 80 0 chr2 242304524 242304798 -8383056 + AluSx SINE Alu 5 300 -12 940 153 92 6 chr2 242304798 242304961 -8382893 + AluSc SINE Alu 132 308 -1 298 239 122 67 chr2 242305768 242305880 -8381974 + Charlie8 DNA MER1_type 42 169 -172 2353 103 0 3 chr2 242305880 242306180 -8381674 + AluSg SINE Alu 1 299 -11 298 239 122 67 chr2 242306180 242306247 -8381607 + Charlie8 DNA MER1_type 169 231 -110 733 201 14 79 chr2 242307029 242307111 -8380743 - L1MB4 LINE L1 0 6180 6094 2436 70 13 25 chr2 242307111 242307425 -8380429 - AluSx SINE Alu -2 310 1 733 201 14 79 chr2 242307425 242307586 -8380268 - L1MB4 LINE L1 -86 6094 5979 206 327 10 69 chr2 242309291 242309392 -8378462 - L3 LINE CR1 -10 1567 1473 244 223 213 0 chr2 242309861 242309955 -8377899 + MER81 DNA DNA 1 114 0 672 48 0 0 chr2 242310043 242310127 -8377727 + (TTCC)n Simple_repeat Simple_repeat 3 86 0 2029 106 4 7 chr2 242310131 242310405 -8377449 - AluSx SINE Alu -37 275 3 830 114 0 46 chr2 242310505 242310636 -8377218 + FLAM_C SINE Alu 1 125 -8 697 237 71 0 chr2 242310675 242310844 -8377010 - MIR SINE MIR -74 188 8 2200 103 3 7 chr2 242312076 242312232 -8375622 - AluSx SINE Alu -23 289 133 2459 85 0 3 chr2 242312232 242312538 -8375316 - AluSq SINE Alu -8 305 1 2200 103 3 7 chr2 242312538 242312671 -8375183 - AluSx SINE Alu -179 133 1 208 274 71 53 chr2 242313701 242313814 -8374040 + MIR SINE MIR 126 240 -22 629 321 101 8 chr2 242314849 242315086 -8372768 + MIR SINE MIR 4 262 0 228 67 0 0 chr2 242315151 242315181 -8372673 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 384 302 22 14 chr2 242315795 242315808 -8372046 - MIR SINE MIR -59 203 192 2337 107 3 19 chr2 242315808 242316125 -8371729 + AluSx SINE Alu 1 312 0 384 302 22 14 chr2 242316125 242316250 -8371604 - MIR SINE MIR -70 192 64 1961 169 0 0 chr2 242316389 242316685 -8371169 + AluJo SINE Alu 1 296 -16 2002 143 3 3 chr2 242316814 242317114 -8370740 - AluSx SINE Alu -12 300 1 212 266 0 47 chr2 242317471 242317535 -8370319 + L2 LINE L2 3251 3311 -2 229 261 77 0 chr2 242317602 242317667 -8370187 - L2 LINE L2 -2 3270 3201 2127 100 46 0 chr2 242319256 242319537 -8368317 - AluSq SINE Alu -19 294 1 2340 103 0 0 chr2 242319540 242319832 -8368022 - AluSx SINE Alu -20 292 1 201 39 0 0 chr2 242320327 242320353 -8367501 + (TG)n Simple_repeat Simple_repeat 1 26 0 2105 144 0 0 chr2 242320389 242320688 -8367166 - AluSx SINE Alu -12 300 2 1123 128 0 0 chr2 242320708 242320886 -8366968 - AluSg/x SINE Alu 0 311 134 2438 143 7 19 chr2 242320977 242321410 -8366444 + L1MB5 LINE L1 5708 6135 -39 2291 105 0 16 chr2 242321412 242321716 -8366138 + AluSx SINE Alu 1 299 -13 1874 159 14 7 chr2 242322338 242322633 -8365221 - AluJo SINE Alu -15 297 1 2349 87 16 13 chr2 242322647 242322958 -8364896 - AluSx SINE Alu 0 312 1 353 244 26 17 chr2 242323089 242323204 -8364650 + L1MB7 LINE L1 6069 6184 0 2405 92 0 0 chr2 242323752 242324046 -8363808 - AluSx SINE Alu -18 294 1 1976 112 0 0 chr2 242325054 242325314 -8362540 + AluSx SINE Alu 41 300 -12 2062 128 10 3 chr2 242325446 242325752 -8362102 + AluSx SINE Alu 1 308 -4 333 100 0 0 chr2 242326891 242326941 -8360913 + (TTCC)n Simple_repeat Simple_repeat 2 51 0 2169 87 0 4 chr2 242326941 242327217 -8360637 - AluSq SINE Alu -38 275 1 446 278 121 12 chr2 242329170 242329343 -8358511 - MIR SINE MIR -13 249 58 947 242 36 20 chr2 242329479 242329501 -8358353 - L1MD2 LINE L1 0 6359 6339 2303 106 0 3 chr2 242329501 242329803 -8358051 + AluSg SINE Alu 1 301 -9 947 242 36 20 chr2 242329803 242330032 -8357822 - L1MD2 LINE L1 -20 6339 6104 1398 123 35 105 chr2 242330708 242330876 -8356978 - L1MC3 LINE L1 0 7785 7652 971 111 0 47 chr2 242330876 242331048 -8356806 - L1PA15 LINE L1 -1 6164 6001 1398 123 35 105 chr2 242331048 242331221 -8356633 - L1MC3 LINE L1 -133 7652 7468 2441 60 0 0 chr2 242331364 242331677 -8356177 - AluY SINE Alu 0 313 1 2274 150 8 0 chr2 242332188 242332567 -8355287 - MLT1B LTR MaLR 0 390 9 802 211 54 22 chr2 242332573 242332758 -8355096 + MER3 DNA MER1_type 6 196 -13 297 312 78 19 chr2 242333429 242333634 -8354220 + L2 LINE L2 2837 3053 -219 354 236 11 0 chr2 242534034 242534123 -8153731 - L1M4 LINE L1 -866 5280 5191 391 257 64 53 chr2 242534250 242534437 -8153417 - L1MC/D LINE L1 -800 5559 5371 1752 181 4 0 chr2 242534511 242534788 -8153066 + AluJo SINE Alu 1 278 -34 389 227 35 35 chr2 242534902 242535043 -8152811 - MLT1K LTR MaLR -72 516 376 1688 234 74 31 chr2 242535208 242535665 -8152189 + MER21B LTR ERV1 313 789 -74 11961 60 7 16 chr2 242536782 242539138 -8148716 + L1PA6 LINE L1 3784 6120 -34 3229 229 35 33 chr2 242539239 242540306 -8147548 - L1ME1 LINE L1 -92 6074 5006 299 263 66 7 chr2 242540394 242540531 -8147323 + L2 LINE L2 2136 2280 -1034 2909 129 64 0 chr2 242541314 242541765 -8146089 - LTR39 LTR ERV1 -303 480 1 354 45 0 0 chr2 242542516 242542560 -8145294 + (CA)n Simple_repeat Simple_repeat 2 45 0 233 185 74 0 chr2 242543881 242543935 -8143919 + MST-int LTR MaLR 217 274 -1377 1951 157 16 47 chr2 242544055 242544438 -8143416 + THE1C LTR MaLR 5 375 0 9966 116 50 14 chr2 242544439 242545963 -8141891 + THE1C-int LTR MaLR 2 1580 0 2016 128 20 76 chr2 242545963 242546360 -8141494 + THE1C LTR MaLR 1 375 0 531 184 92 107 chr2 242546993 242547228 -8140626 + AluJo SINE Alu 90 321 0 247 280 67 0 chr2 242548323 242548398 -8139456 + MLT1D LTR MaLR 346 425 -80 1248 203 77 7 chr2 242551134 242551420 -8136434 - MER33 DNA MER1_type -6 318 13 1899 157 0 30 chr2 242551472 242551772 -8136082 - AluSx SINE Alu -16 296 6 434 169 13 0 chr2 242552011 242552088 -8135766 + FLAM_A SINE Alu 1 78 -54 222 118 0 0 chr2 242552105 242552139 -8135715 + (ATTG)n Simple_repeat Simple_repeat 2 35 0 839 231 28 19 chr2 242552329 242552545 -8135309 - MLT1D LTR MaLR -287 218 1 284 276 79 24 chr2 242552712 242552839 -8135015 - L1M4 LINE L1 -944 5202 5069 304 221 53 0 chr2 242552973 242553068 -8134786 + L2 LINE L2 2181 2280 -1034 1947 138 3 20 chr2 242556864 242557168 -8130686 - AluSx SINE Alu -11 301 3 193 294 44 15 chr2 242557505 242557573 -8130281 + MIR SINE MIR 31 100 -162 2503 123 0 0 chr2 242558316 242558665 -8129189 - Tigger2 DNA MER2_type -238 2480 2132 2216 122 7 0 chr2 242558670 242558966 -8128888 - AluSx SINE Alu -14 298 1 7076 64 13 42 chr2 242558980 242560691 -8127163 - SVA Other Other -683 1386 1 270 293 0 0 chr2 242560691 242560773 -8127081 + GA-rich Low_complexity Low_complexity 2 83 0 1442 193 16 14 chr2 242560864 242561199 -8126655 - MER33 DNA MER1_type 0 324 1 1690 189 0 0 chr2 242561350 242561635 -8126219 + AluJb SINE Alu 11 295 -17 440 195 46 0 chr2 242561693 242561780 -8126074 + AluJo SINE Alu 124 214 -98 912 232 24 10 chr2 242562009 242562216 -8125638 - MLT1D LTR MaLR -295 210 1 391 274 111 29 chr2 242562365 242562573 -8125281 - L1M4 LINE L1 -922 5224 5000 249 243 125 15 chr2 242562599 242562735 -8125119 + L2 LINE L2 2130 2280 -1034 22 35 0 0 chr2 242565497 242565526 -8122328 + AT_rich Low_complexity Low_complexity 1 29 0 1607 154 3 11 chr2 242566194 242566473 -8121381 - L1MA4 LINE L1 -3 6297 6019 2441 92 0 0 chr2 242566473 242566776 -8121078 - AluSc SINE Alu -6 303 1 1450 156 21 7 chr2 242566869 242567151 -8120703 - L1MA4 LINE L1 -236 6064 5779 1062 168 34 34 chr2 242567173 242567382 -8120472 - MER21B LTR ERV1 -6 857 649 1245 136 82 5 chr2 242567397 242567444 -8120410 + L1MB5 LINE L1 5545 5587 -713 180 0 0 0 chr2 242567444 242567464 -8120390 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1245 136 82 5 chr2 242567464 242567636 -8120218 + L1MB5 LINE L1 5587 5781 -519 315 200 0 0 chr2 242567639 242567694 -8120160 + MER21B LTR ERV1 1 55 -808 7017 174 53 10 chr2 242567694 242569172 -8118682 - L1M4 LINE L1 -1704 4442 2902 537 199 86 0 chr2 242569647 242569783 -8118071 + L1MB5 LINE L1 6035 6184 0 678 237 50 55 chr2 242571166 242571385 -8116469 + MER20 DNA MER1_type 2 219 0 5161 46 5 2 chr2 242572077 242572702 -8115152 - L1PA4 LINE L1 -3 6152 5526 5801 31 7 4 chr2 242572703 242573416 -8114438 + L1P LINE L1 2494 3208 -2938 929 186 28 13 chr2 242573413 242573642 -8114212 - L1MB8 LINE L1 -65 6349 6103 * 2797 231 45 26 chr2 242573643 242574440 -8113414 - L1MB8 LINE L1 -1824 4558 3747 2235 97 0 7 chr2 242574542 242574840 -8113014 + AluSq SINE Alu 1 296 -17 321 277 28 25 chr2 242574878 242575086 -8112768 - L1MB8 LINE L1 -4539 1843 1674 436 193 55 198 chr2 242575441 242575535 -8112319 - MER45A DNA AcHobo -1406 175 124 1576 158 0 27 chr2 242575535 242575794 -8112060 + AluSx SINE Alu 40 291 -21 436 193 55 198 chr2 242575794 242575901 -8111953 - MER45A DNA AcHobo -1457 124 3 808 294 44 4 chr2 242576609 242576837 -8111017 - MER70B LTR ERVL -143 435 199 1149 121 0 0 chr2 242576938 242577103 -8110751 - L1PA11 LINE L1 -1 6173 6009 1068 206 66 54 chr2 242577158 242577493 -8110361 - L1ME3A LINE L1 -208 5962 5624 943 59 0 8 chr2 242577596 242577714 -8110140 + L1PA4 LINE L1 6019 6135 -20 198 0 0 0 chr2 242577717 242577739 -8110115 + (TAA)n Simple_repeat Simple_repeat 3 24 0 23568 113 10 17 chr2 242577741 242581300 -8106554 - L1P LINE L1 -2596 3550 16 245 167 74 0 chr2 242581420 242581474 -8106380 + MST-int LTR MaLR 217 274 -1377 1754 150 83 44 chr2 242581586 242581947 -8105907 + THE1C LTR MaLR 1 375 0 9825 123 48 15 chr2 242581947 242583477 -8104377 + THE1C-int LTR MaLR 1 1580 0 2047 141 18 59 chr2 242583477 242583868 -8103986 + THE1C LTR MaLR 1 375 0 723 223 47 62 chr2 242584501 242584712 -8103142 + AluJo SINE Alu 92 299 -13 3014 130 47 12 chr2 242585717 242586211 -8101643 - MER9 LTR ERVK 0 511 1 377 255 75 0 chr2 242586297 242586403 -8101451 + MLT1D LTR MaLR 346 459 -46 1729 175 82 26 chr2 242588024 242588453 -8099401 - Charlie1b DNA MER1_type -69 454 2 779 190 39 19 chr2 242588463 242588668 -8099186 + MER2 DNA MER2_type 2 210 -135 249 378 85 21 chr2 242590149 242590337 -8097517 + L2 LINE L2 3073 3272 0 7029 66 7 0 chr2 242590630 242592125 -8095729 + L1PA10 LINE L1 4668 6168 0 203 222 67 0 chr2 242592296 242592341 -8095513 + L2 LINE L2 3224 3271 -1 232 338 0 0 chr2 242592545 242592616 -8095238 + (CA)n Simple_repeat Simple_repeat 1 71 0 346 300 33 0 chr2 242592774 242592894 -8094960 - MIR SINE MIR -30 232 109 961 216 95 36 chr2 242596051 242596357 -8091497 - MER33 DNA MER1_type 0 324 1 186 260 80 0 chr2 242596758 242596808 -8091046 - MIR SINE MIR -134 74 21 2264 80 66 0 chr2 242598061 242598347 -8089507 - AluSg SINE Alu -5 305 1 881 251 135 44 chr2 242599155 242599518 -8088336 - MSTD LTR MaLR 0 396 1 335 286 170 29 chr2 242599667 242599927 -8087927 + L1ME LINE L1 5356 5647 -515 1315 228 44 9 chr2 242600574 242600890 -8086964 + MLT1A2 LTR MaLR 38 364 -10 2299 75 7 0 chr2 242601387 242601701 -8086153 + AluSg SINE Alu 1 316 0 221 282 26 0 chr2 242602395 242602473 -8085381 + MIR SINE MIR 164 243 -19 382 277 84 6 chr2 242606889 242607055 -8080799 + L1MC4a LINE L1 6072 6250 -1558 871 256 145 88 chr2 242607291 242608364 -8079490 + L1MC4 LINE L1 6900 8034 -8 2290 122 0 0 chr2 242609538 242609833 -8078021 - AluSx SINE Alu -17 295 1 2222 130 3 0 chr2 242610552 242610859 -8076995 + AluSx SINE Alu 1 308 -4 750 249 40 5 chr2 242612125 242612326 -8075528 + MER3 DNA MER1_type 1 208 -1 210 286 76 48 chr2 242612719 242612824 -8075030 - L2 LINE L2 -492 2822 2715 910 205 6 0 chr2 242615715 242615886 -8071968 + MER58B DNA MER1_type 169 340 -1 34 0 0 0 chr2 242615953 242615987 -8071867 + AT_rich Low_complexity Low_complexity 1 34 0 344 314 73 55 chr2 242617799 242618019 -8069835 - MIR SINE MIR 0 262 39 1058 199 181 3 chr2 242619329 242619650 -8068204 - MER69 DNA AcHobo -47 2479 2102 587 309 92 4 chr2 242619871 242620120 -8067734 + LTR16A LTR ERVL 1 271 -179 722 172 79 187 chr2 242620444 242620787 -8067067 - MER51C LTR ERV1 0 634 329 2024 165 68 29 chr2 242621339 242621781 -8066073 - LTR2B LTR ERV1 0 490 32 23 33 0 0 chr2 242622704 242622734 -8065120 + AT_rich Low_complexity Low_complexity 1 30 0 1550 160 66 132 chr2 242622923 242623166 -8064688 - MSTD LTR MaLR 0 396 191 1922 117 71 4 chr2 242623166 242623447 -8064407 - AluSx SINE Alu -12 300 1 1550 160 66 132 chr2 242623447 242623627 -8064227 - MSTD LTR MaLR -205 191 1 315 0 0 0 chr2 242624116 242624151 -8063703 + (TG)n Simple_repeat Simple_repeat 2 36 0 1490 173 63 81 chr2 242625049 242625430 -8062424 - MLT1B LTR MaLR -16 374 1 21 0 0 0 chr2 242625612 242625633 -8062221 + AT_rich Low_complexity Low_complexity 1 21 0 653 236 55 6 chr2 242626545 242626585 -8061269 - MLT2B3 LTR ERVL -2 552 515 359 21 21 0 chr2 242626585 242626633 -8061221 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 653 236 55 6 chr2 242626633 242626757 -8061097 - MLT2B3 LTR ERVL -39 515 380 * 970 198 26 16 chr2 242626735 242626927 -8060927 - MLT2B1 LTR ERVL -230 290 97 2004 130 7 11 chr2 242627349 242627662 -8060192 + AluSx SINE Alu 1 312 0 2530 69 0 0 chr2 242627904 242628207 -8059647 + AluY SINE Alu 1 303 -8 1052 182 25 18 chr2 242628951 242629231 -8058623 - MER33 DNA MER1_type 0 324 43 222 37 0 0 chr2 242631845 242631872 -8055982 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2190 79 0 7 chr2 242631880 242632157 -8055697 - AluSq SINE Alu -36 277 3 2309 91 10 0 chr2 242632171 242632469 -8055385 - AluSg SINE Alu -9 301 1 388 288 39 46 chr2 242632843 242632996 -8054858 - L1M4 LINE L1 -2848 3298 3147 25 0 0 0 chr2 242633266 242633291 -8054563 + AT_rich Low_complexity Low_complexity 1 25 0 31 26 0 0 chr2 242633342 242633380 -8054474 + AT_rich Low_complexity Low_complexity 1 38 0 932 276 111 48 chr2 242633518 242634303 -8053551 - L1M4 LINE L1 -997 5149 4316 387 198 72 18 chr2 242634300 242634411 -8053443 - L1MD1 LINE L1 0 6242 6126 * 1652 226 66 5 chr2 242634416 242634840 -8053014 - L1M4 LINE L1 -3039 3107 2658 2786 121 67 0 chr2 242636511 242636916 -8050938 - MER57B LTR ERV1 0 434 3 232 331 138 26 chr2 242636926 242637195 -8050659 + L1ME4a LINE L1 5350 5648 -2160 368 281 132 35 chr2 242637256 242637597 -8050257 + L1ME4a LINE L1 5744 6117 -4 184 298 21 0 chr2 242637950 242637997 -8049857 - L3 LINE CR1 -1197 380 333 2219 151 59 28 chr2 242638785 242639256 -8048598 + MLT2A2 LTR ERVL 1 514 -40 276 149 0 0 chr2 242639256 242639303 -8048551 + (CA)n Simple_repeat Simple_repeat 2 48 0 366 39 78 0 chr2 242639315 242639366 -8048488 + MLT2A2 LTR ERVL 399 453 0 447 308 72 53 chr2 242639575 242639783 -8048071 - MIR SINE MIR -7 255 44 30 0 0 0 chr2 242639858 242639888 -8047966 + AT_rich Low_complexity Low_complexity 1 30 0 4055 30 13 4 chr2 242639888 242640349 -8047505 - L1PA8 LINE L1 -8 6164 5700 5523 124 15 15 chr2 242640349 242641164 -8046690 - L1MC1 LINE L1 -6 6327 5509 7206 182 36 45 chr2 242641895 242643240 -8044614 - L1MC3 LINE L1 -175 7643 6310 553 75 25 0 chr2 242643240 242643320 -8044534 + AluJ/FRAM SINE Alu 231 312 0 7206 182 36 45 chr2 242643320 242643688 -8044166 - L1MC3 LINE L1 -1508 6310 5940 33 0 0 0 chr2 242644259 242644292 -8043562 + AT_rich Low_complexity Low_complexity 1 33 0 556 251 47 63 chr2 242644352 242644463 -8043391 - L1ME1 LINE L1 -7 6159 6051 1884 121 45 51 chr2 242644463 242644598 -8043256 + AluSx SINE Alu 1 135 -177 2304 107 0 0 chr2 242644598 242644907 -8042947 + AluSc SINE Alu 1 309 0 1884 121 45 51 chr2 242644907 242645085 -8042769 + AluSx SINE Alu 135 312 0 556 251 47 63 chr2 242645085 242645164 -8042690 - L1ME1 LINE L1 -115 6051 5972 * 2508 264 94 26 chr2 242645161 242645518 -8042336 - L1MCc LINE L1 -3307 3634 3303 2238 108 7 0 chr2 242645518 242645813 -8042041 - AluSq SINE Alu -16 297 1 2508 264 94 26 chr2 242645813 242647606 -8040248 - L1MCc LINE L1 -3638 3303 988 408 20 0 0 chr2 242647606 242647655 -8040199 + (TG)n Simple_repeat Simple_repeat 2 50 0 2508 264 94 26 chr2 242647655 242647780 -8040074 - L1MCc LINE L1 -5953 988 873 23 0 0 0 chr2 242647858 242647881 -8039973 + AT_rich Low_complexity Low_complexity 1 23 0 1861 260 181 14 chr2 242648227 242648814 -8039040 + MER69 DNA AcHobo 1 700 -526 1856 131 33 7 chr2 242648814 242649115 -8038739 - AluSx SINE Alu 0 308 1 1861 260 181 14 chr2 242649115 242649152 -8038702 + MER69 DNA AcHobo 700 730 -496 332 198 62 12 chr2 242649279 242649360 -8038494 + MIR SINE MIR 101 185 -77 454 307 40 0 chr2 242649817 242649993 -8037861 + MIR SINE MIR 2 184 -78 237 122 61 20 chr2 242650041 242650090 -8037764 - L1ME1 LINE L1 -341 5825 5775 2403 62 3 7 chr2 242650092 242650398 -8037456 - AluY SINE Alu -4 307 3 570 260 96 29 chr2 242651291 242651499 -8036355 + MIR SINE MIR 35 256 -6 1015 267 91 15 chr2 242652745 242653086 -8034768 - LTR16A LTR ERVL -23 427 61 739 180 153 44 chr2 242653121 242653349 -8034505 - ORSL DNA AcHobo -22 253 1 274 326 96 13 chr2 242653432 242653662 -8034192 - L1M4 LINE L1 -2145 4001 3753 267 176 73 0 chr2 242654011 242654079 -8033775 + MER103 DNA DNA 24 96 -70 964 213 20 5 chr2 242654476 242654678 -8033176 - MER3 DNA MER1_type 0 209 5 277 339 45 18 chr2 242655038 242655150 -8032704 + L2 LINE L2 3137 3251 -21 232 315 21 63 chr2 242655322 242655419 -8032435 + L2 LINE L2 2771 2862 -452 1266 117 26 155 chr2 242655419 242655683 -8032171 - MER30 DNA MER1_type 0 230 1 232 315 21 63 chr2 242655683 242655728 -8032126 + L2 LINE L2 2862 2907 -407 366 338 15 7 chr2 242655838 242655974 -8031880 + MLT1K LTR MaLR 210 346 -242 941 264 107 56 chr2 242656092 242656195 -8031659 + L1ME2 LINE L1 5083 5179 -985 180 0 0 0 chr2 242656195 242656215 -8031639 + (CAA)n Simple_repeat Simple_repeat 2 21 0 941 264 107 56 chr2 242656215 242656723 -8031131 + L1ME2 LINE L1 5179 5741 -423 2391 103 81 32 chr2 242656723 242657093 -8030761 - MLT1B LTR MaLR -2 388 1 941 264 107 56 chr2 242657093 242657247 -8030607 + L1ME2 LINE L1 5741 5886 -278 1067 240 108 53 chr2 242657247 242657664 -8030190 + LTR16A LTR ERVL 1 440 -10 1766 208 63 29 chr2 242657706 242658153 -8029701 - MLT1C LTR MaLR 0 467 6 744 273 75 21 chr2 242658160 242658668 -8029186 + HERV16 LTR ERVL 33 607 -4389 328 319 144 35 chr2 242659096 242659553 -8028301 + L1ME LINE L1 4041 4547 -1599 2391 82 0 48 chr2 242660071 242660425 -8027429 + L1PB1 LINE L1 5446 5782 -369 237 91 0 18 chr2 242660426 242660481 -8027373 - LTR66 LTR ERVL -171 439 386 240 35 0 0 chr2 242660498 242660527 -8027327 + (TG)n Simple_repeat Simple_repeat 1 29 0 236 73 0 0 chr2 242660527 242660568 -8027286 - LTR66 LTR ERVL -172 438 398 1172 86 0 0 chr2 242660568 242660719 -8027135 + L1PB1 LINE L1 5783 5933 -218 2019 55 0 135 chr2 242660762 242661018 -8026836 + L1PB1 LINE L1 5869 6073 -78 1586 121 0 0 chr2 242661018 242661242 -8026612 + AluSg/x SINE Alu 87 310 0 2019 55 0 135 chr2 242661242 242661312 -8026542 + L1PB1 LINE L1 6073 6151 0 303 318 55 36 chr2 242661494 242661714 -8026140 + L1ME LINE L1 4942 5165 -981 1197 172 38 45 chr2 242661750 242662085 -8025769 - MER33 DNA MER1_type -1 323 1 662 292 88 41 chr2 242662175 242662554 -8025300 + L1ME LINE L1 5255 5657 -464 2960 168 9 2 chr2 242662554 242663018 -8024836 - MLT1C LTR MaLR 0 467 1 662 292 88 41 chr2 242663018 242663056 -8024798 + L1ME LINE L1 5657 5692 -429 253 194 48 0 chr2 242663058 242663120 -8024734 + L2 LINE L2 2549 2613 -701 635 293 29 19 chr2 242664575 242664783 -8023071 + MIR SINE MIR 19 228 -34 21 0 0 0 chr2 242665058 242665079 -8022775 + AT_rich Low_complexity Low_complexity 1 21 0 2228 121 0 3 chr2 242665079 242665384 -8022470 - AluSx SINE Alu -8 304 1 274 261 14 0 chr2 242665529 242665598 -8022256 + CT-rich Low_complexity Low_complexity 1 70 0 811 278 111 8 chr2 242665769 242666119 -8021735 + MLT1J2 LTR MaLR 4 387 -59 266 218 115 23 chr2 242666086 242666173 -8021681 + MLT1I LTR MaLR 315 409 0 * 852 197 61 0 chr2 242666316 242666463 -8021391 - FRAM SINE Alu -10 156 1 235 225 42 42 chr2 242666490 242666561 -8021293 - L2 LINE L2 -8 3264 3194 343 300 22 0 chr2 242666739 242666829 -8021025 - Charlie8 DNA MER1_type -2325 92 1 576 255 45 89 chr2 242666933 242667270 -8020584 + MLT1K LTR MaLR 244 565 -23 221 258 61 0 chr2 242667745 242667811 -8020043 - L2 LINE L2 0 3272 3203 243 173 0 0 chr2 242668356 242668408 -8019446 + GA-rich Low_complexity Low_complexity 4 55 0 464 281 51 13 chr2 242668620 242668781 -8019073 + MIR SINE MIR 46 212 -50 1916 186 34 96 chr2 242668825 242669303 -8018551 - MLT1D LTR MaLR -57 448 1 2136 89 0 36 chr2 242669304 242669606 -8018248 - AluY SINE Alu -20 291 1 200 377 29 70 chr2 242670173 242670417 -8017437 + L2 LINE L2 3039 3272 0 255 253 25 13 chr2 242670719 242670798 -8017056 - L2 LINE L2 -9 3263 3184 2437 81 0 3 chr2 242671004 242671312 -8016542 + AluSp SINE Alu 1 307 -6 305 217 0 0 chr2 242671325 242671385 -8016469 - MIR SINE MIR -20 242 183 755 294 32 18 chr2 242671622 242671840 -8016014 - MIR SINE MIR -38 224 4 870 283 77 57 chr2 242672566 242673058 -8014796 - L2 LINE L2 -514 2800 2299 904 250 49 25 chr2 242673265 242673509 -8014345 + MIR SINE MIR 8 257 -5 237 196 0 0 chr2 242675071 242675122 -8012732 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 906 294 98 28 chr2 242675395 242676092 -8011762 + L2 LINE L2 2494 3268 -45 447 257 164 20 chr2 242677374 242677526 -8010328 + MER5A DNA MER1_type 15 188 -1 355 176 54 0 chr2 242679374 242679448 -8008406 - L1MB3 LINE L1 -58 6125 6048 369 0 0 0 chr2 242680078 242680119 -8007735 + (TC)n Simple_repeat Simple_repeat 2 42 0 2183 118 0 0 chr2 242680119 242680407 -8007447 - AluSx SINE Alu -24 288 1 227 179 75 45 chr2 242680673 242680740 -8007114 + Charlie8 DNA MER1_type 1349 1417 -1000 219 255 28 0 chr2 242682609 242682715 -8005139 + (TAA)n Simple_repeat Simple_repeat 1 109 0 585 239 25 12 chr2 242683750 242683913 -8003941 + MIR SINE MIR 7 171 -91 474 213 88 0 chr2 242684309 242684445 -8003409 + MER5A DNA MER1_type 1 148 -41 1194 265 30 43 chr2 242684983 242685173 -8002681 - L1MD2 LINE L1 0 6359 6175 2336 95 0 13 chr2 242685173 242685478 -8002376 - AluSq SINE Alu -12 301 1 1194 265 30 43 chr2 242685478 242685660 -8002194 - L1MD2 LINE L1 -184 6175 5992 501 226 45 40 chr2 242685758 242685935 -8001919 - LTR24B LTR ERV1 -6 570 393 2258 101 19 7 chr2 242685940 242686290 -8001564 - AluSx SINE Alu 0 354 1 397 183 0 24 chr2 242686541 242686623 -8001231 - LTR24B LTR ERV1 -493 83 4 439 314 55 15 chr2 242686954 242687176 -8000678 - HAL1b LINE L1 -758 590 354 2266 90 7 10 chr2 242687176 242687486 -8000368 - AluY SINE Alu -2 309 1 439 314 55 15 chr2 242687486 242687534 -8000320 - HAL1b LINE L1 -994 354 309 191 36 36 0 chr2 242688104 242688132 -7999722 + (CAA)n Simple_repeat Simple_repeat 2 30 0 437 278 88 63 chr2 242689535 242689966 -7997888 - L2 LINE L2 -4 3268 2827 367 234 166 14 chr2 242691721 242691866 -7995988 - MER96 DNA MER1_type? -5 170 4 1212 71 0 22 chr2 242692020 242692044 -7995810 + (TTTC)n Simple_repeat Simple_repeat 1 203 0 1212 71 0 22 chr2 242692044 242692228 -7995626 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2507 78 0 0 chr2 242692278 242692586 -7995268 - AluY SINE Alu -3 308 1 246 268 96 73 chr2 242693242 242693503 -7994351 - L1ME3A LINE L1 -213 5957 5691 528 252 70 18 chr2 242694130 242694421 -7993433 - L1ME3A LINE L1 -677 5507 5207 244 326 96 0 chr2 242695832 242695967 -7991887 + MIR SINE MIR 31 178 -84 342 264 47 39 chr2 242696226 242696355 -7991499 - MIR3 SINE MIR -76 132 3 621 264 88 100 chr2 242696495 242696825 -7991029 - MLT1K LTR MaLR -116 472 147 1139 161 19 28 chr2 242697526 242697737 -7990117 + MER3 DNA MER1_type 1 209 0 206 188 42 21 chr2 242699456 242699504 -7988350 - L2 LINE L2 -1 3271 3223 342 252 205 0 chr2 242699614 242699741 -7988113 + MER91A DNA MER1_type 1 153 -43 2206 120 3 0 chr2 242701203 242701512 -7986342 - AluSx SINE Alu -2 310 1 1865 123 158 78 chr2 242702672 242703046 -7984808 - MER4A LTR ERV1 0 664 261 425 127 241 0 chr2 242703046 242703125 -7984729 - MER4A LTR ERV1 -566 98 1 1403 287 56 9 chr2 242703974 242704514 -7983340 - L1MC4 LINE L1 0 8042 7478 449 210 20 20 chr2 242704765 242704865 -7982989 - L2 LINE L2 0 3313 3214 2488 220 22 24 chr2 242705015 242705607 -7982247 - LTR31 LTR ERV1 -15 604 14 269 242 8 102 chr2 242706279 242706388 -7981466 - MER5A DNA MER1_type -15 174 77 2465 88 0 0 chr2 242706388 242706694 -7981160 - AluSg SINE Alu -4 306 1 269 242 8 102 chr2 242706694 242706712 -7981142 - MER5A DNA MER1_type -112 77 59 180 0 0 0 chr2 242707384 242707404 -7980450 + (T)n Simple_repeat Simple_repeat 1 20 0 1639 45 0 0 chr2 242707426 242707624 -7980230 - L1PA4 LINE L1 0 6155 5958 1919 23 0 0 chr2 242707624 242707841 -7980013 + L1PA4 LINE L1 5732 5948 -207 293 279 121 7 chr2 242708515 242708655 -7979199 + MER117 DNA MER1_type 1 156 -41 779 219 5 30 chr2 242709103 242709304 -7978550 - MIR SINE MIR 0 262 67 189 74 0 0 chr2 242709795 242709822 -7978032 + (CA)n Simple_repeat Simple_repeat 2 28 0 260 352 19 38 chr2 242709877 242710036 -7977818 + MIR3 SINE MIR 21 176 -32 823 126 37 0 chr2 242712120 242712255 -7975599 - L1PA15 LINE L1 0 6165 6026 238 154 0 0 chr2 242712534 242712573 -7975281 - L2 LINE L2 -1 3312 3274 919 48 89 0 chr2 242712671 242712795 -7975059 - MER85 DNA T2_type -3 136 2 2322 112 0 3 chr2 242713067 242713380 -7974474 + AluSx SINE Alu 1 312 0 21 36 0 0 chr2 242713733 242713761 -7974093 + AT_rich Low_complexity Low_complexity 1 28 0 1402 218 42 26 chr2 242715235 242715352 -7972502 + AluJo SINE Alu 1 115 -197 333 0 0 0 chr2 242715352 242715389 -7972465 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 1402 218 42 26 chr2 242715389 242715578 -7972276 + AluJo SINE Alu 115 312 0 361 307 103 52 chr2 242716453 242717086 -7970768 - L2 LINE L2 0 3272 2624 197 171 171 0 chr2 242717919 242717960 -7969894 - L2 LINE L2 -6 3266 3219 208 167 0 24 chr2 242717960 242718002 -7969852 + (CA)n Simple_repeat Simple_repeat 2 42 0 185 313 60 0 chr2 242719702 242719769 -7968085 + MIR SINE MIR 113 183 -79 3400 125 25 0 chr2 242720078 242720565 -7967289 + MER1A DNA MER1_type 31 529 0 353 152 359 0 chr2 242721318 242721410 -7966444 + MIR SINE MIR 9 133 -129 563 231 37 0 chr2 242721410 242721518 -7966336 - MER63B DNA MER1_type 0 436 325 1699 189 13 22 chr2 242721520 242721832 -7966022 + AluJb SINE Alu 1 309 -3 1422 224 6 42 chr2 242721852 242722205 -7965649 - MER63B DNA MER1_type -96 340 1 408 193 44 53 chr2 242722206 242722320 -7965534 + MIR SINE MIR 129 241 -21 214 313 88 0 chr2 242722580 242722660 -7965194 - MIR SINE MIR -119 143 57 516 227 108 45 chr2 242722705 242722881 -7964973 + MER5A DNA MER1_type 3 189 0 354 265 37 157 chr2 242723171 242723359 -7964495 - MER102b DNA MER1_type -1112 316 107 2301 88 0 0 chr2 242723359 242723642 -7964212 - AluSq SINE Alu -30 283 1 1932 106 84 28 chr2 242723642 242723926 -7963928 - AluSx SINE Alu -11 301 2 354 265 37 157 chr2 242723926 242724087 -7963767 - MER102b DNA MER1_type -1319 109 8 1784 123 15 19 chr2 242724109 242724369 -7963485 - AluSx SINE Alu -23 289 31 2166 127 0 0 chr2 242725621 242725920 -7961934 - AluSg SINE Alu -11 299 1 2377 103 3 0 chr2 242725934 242726245 -7961609 - AluSx SINE Alu 0 312 1 925 286 59 3 chr2 242726538 242726862 -7960992 + LTR16C LTR ERVL 66 491 0 2528 87 0 0 chr2 242728586 242728898 -7958956 + AluSx SINE Alu 1 312 0 481 207 78 52 chr2 242729404 242729597 -7958257 - LTR40b LTR ERVL -8 454 257 22 35 0 0 chr2 242729994 242730023 -7957831 + AT_rich Low_complexity Low_complexity 1 29 0 2369 95 0 3 chr2 242730162 242730466 -7957388 - AluSq SINE Alu -10 303 1 656 279 55 5 chr2 242731303 242731504 -7956350 + MIR SINE MIR 1 211 -51 326 337 55 12 chr2 242731767 242731930 -7955924 - MIR SINE MIR -72 190 21 723 280 67 4 chr2 242732550 242732818 -7955036 - LTR16C LTR ERVL -17 474 190 2123 94 3 29 chr2 242733513 242733822 -7954032 + AluSp SINE Alu 1 301 -12 184 330 57 11 chr2 242735254 242735342 -7952512 + L2 LINE L2 3181 3272 0 484 201 76 42 chr2 242735628 242735772 -7952082 + MER117 DNA MER1_type 15 163 -34 1620 94 5 5 chr2 242735861 242736085 -7951769 - pTR5 LTR ERV1 -2043 395 172 353 250 31 0 chr2 242736088 242736184 -7951670 - LTR30 LTR ERV1 -80 642 544 5927 123 47 61 chr2 242736184 242737349 -7950505 - pTR5 LTR ERV1 -413 2025 743 2032 234 28 11 chr2 242737535 242737993 -7949861 - MLT1C LTR MaLR -1 466 1 2196 99 0 10 chr2 242738536 242738848 -7949006 - AluSc SINE Alu 0 309 1 269 68 23 0 chr2 242739186 242739230 -7948624 + (GA)n Simple_repeat Simple_repeat 2 46 0 2178 97 0 3 chr2 242739915 242740245 -7947609 + AluSx SINE Alu 1 312 0 229 254 99 0 chr2 242740266 242740337 -7947517 + L3 LINE CR1 1273 1350 -227 427 179 160 9 chr2 242740373 242740479 -7947375 - L2 LINE L2 0 3313 3192 324 0 0 0 chr2 242742515 242742551 -7945303 + (TG)n Simple_repeat Simple_repeat 2 37 0 279 178 41 14 chr2 242742701 242742774 -7945080 + HsTC2 DNA Tc2 1 75 -1823 221 255 196 29 chr2 242743326 242743428 -7944426 + MIR SINE MIR 43 161 -101 272 365 36 29 chr2 242743615 242743752 -7944102 + L2 LINE L2 3134 3271 -1 731 276 0 35 chr2 242744010 242744184 -7943670 - MER91B DNA MER1_type -18 172 5 762 156 0 31 chr2 242744853 242744981 -7942873 - AluJb SINE Alu -185 127 4 851 128 0 38 chr2 242745246 242745379 -7942475 + FLAM_C SINE Alu 3 130 -13 195 358 0 0 chr2 242746785 242746852 -7941002 + L3 LINE CR1 1510 1576 -1 188 204 19 19 chr2 242748343 242748397 -7939457 - MIR SINE MIR -41 221 168 196 276 55 0 chr2 242748434 242748522 -7939332 + MIR SINE MIR 36 128 -80 543 263 112 48 chr2 242748792 242749104 -7938750 + L2 LINE L2 2442 2773 -541 2168 108 0 10 chr2 242749117 242749423 -7938431 + AluSx SINE Alu 1 303 -9 335 341 36 71 chr2 242749480 242749844 -7938010 + L2 LINE L2 2921 3271 -1 306 303 163 22 chr2 242751015 242751605 -7936249 + L1ME LINE L1 5209 5896 -225 230 302 121 73 chr2 242751892 242751982 -7935872 + L2 LINE L2 2632 2716 -556 2240 121 11 55 chr2 242751982 242752362 -7935492 + THE1B LTR MaLR 2 364 0 230 302 121 73 chr2 242752362 242752776 -7935078 + L2 LINE L2 2716 3200 -72 308 298 24 0 chr2 242754459 242754543 -7933311 - MIR SINE MIR 0 262 177 1332 237 38 17 chr2 242754563 242754936 -7932918 - LTR43 LTR ERV1 -52 480 176 213 229 0 0 chr2 242755141 242755189 -7932665 - MIR SINE MIR -113 149 102 197 65 32 0 chr2 242755227 242755258 -7932596 + (TATAA)n Simple_repeat Simple_repeat 4 35 0 442 336 67 57 chr2 242755973 242756393 -7931461 - L1M4 LINE L1 -1308 4838 4415 402 291 75 83 chr2 242756539 242756793 -7931061 - L1M4 LINE L1 -2142 4004 3753 450 238 12 0 chr2 242757850 242757934 -7929920 - MER58 DNA MER1_type -255 86 2 183 367 22 0 chr2 242758716 242758806 -7929048 + MIR SINE MIR 157 248 -14 606 311 20 60 chr2 242759387 242759635 -7928219 + MIR SINE MIR 4 241 -21 715 227 64 99 chr2 242759860 242760235 -7927619 - L1ME4a LINE L1 -192 5929 5568 2128 93 0 29 chr2 242761298 242761610 -7926244 + AluSx SINE Alu 1 303 -9 960 175 109 13 chr2 242762482 242762709 -7925145 - ORSL DNA AcHobo -2 273 25 430 187 13 0 chr2 242762709 242762784 -7925070 - MER81 DNA DNA 0 114 39 304 333 76 0 chr2 242763122 242763227 -7924627 - MER81 DNA DNA 0 114 2 326 235 94 0 chr2 242763369 242763454 -7924400 - MLT1H LTR MaLR 0 549 457 264 77 0 0 chr2 242763461 242763500 -7924354 + (CAGGG)n Simple_repeat Simple_repeat 3 41 0 525 254 52 12 chr2 242763628 242763801 -7924053 - MLT1H LTR MaLR -294 255 76 2135 88 0 3 chr2 242764402 242764725 -7923129 - AluSg SINE Alu 0 322 1 1308 241 46 82 chr2 242764837 242764997 -7922857 - MER39 LTR ERV1 -1 687 523 1844 145 3 0 chr2 242764997 242765293 -7922561 - AluSx SINE Alu -15 297 1 1308 241 46 82 chr2 242765293 242765693 -7922161 - MER39 LTR ERV1 -165 523 1 398 257 67 129 chr2 242766192 242766565 -7921289 - L2 LINE L2 -8 3264 2915 485 306 172 11 chr2 242767869 242768137 -7919717 + L3 LINE CR1 1159 1469 -108 621 294 55 64 chr2 242769179 242769717 -7918137 - L1ME4a LINE L1 -229 5892 5364 1849 120 0 57 chr2 242769944 242770243 -7917611 + AluSq SINE Alu 1 282 -31 369 0 0 0 chr2 242770243 242770284 -7917570 + (CA)n Simple_repeat Simple_repeat 2 42 0 317 242 116 32 chr2 242773051 242773146 -7914708 + L2 LINE L2 3211 3313 0 9919 173 23 28 chr2 242774129 242775952 -7911902 - L1MA9 LINE L1 -6 6306 4476 2330 63 10 0 chr2 242775952 242776251 -7911603 + AluY SINE Alu 1 302 -9 9919 173 23 28 chr2 242776251 242776470 -7911384 - L1MA9 LINE L1 -1836 4476 4257 2149 97 14 0 chr2 242776470 242776760 -7911094 - AluSg SINE Alu -15 295 2 9919 173 23 28 chr2 242776760 242776779 -7911075 - L1MA9 LINE L1 -2055 4257 4239 288 70 0 0 chr2 242776779 242776822 -7911032 + (TG)n Simple_repeat Simple_repeat 2 44 0 9919 173 23 28 chr2 242776822 242777907 -7909947 - L1MA9 LINE L1 -2073 4239 3179 229 271 17 0 chr2 242779753 242779812 -7908042 - L2 LINE L2 -5 3267 3208 397 266 164 21 chr2 242782301 242782722 -7905132 - L1ME4a LINE L1 0 6121 5641 37 39 0 0 chr2 242782722 242782773 -7905081 + AT_rich Low_complexity Low_complexity 1 51 0 25 0 0 0 chr2 242782856 242782881 -7904973 + AT_rich Low_complexity Low_complexity 1 25 0 1610 123 0 0 chr2 242782928 242783156 -7904698 + AluSx SINE Alu 51 278 -34 333 0 0 0 chr2 242783161 242783198 -7904656 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 282 353 51 51 chr2 242784303 242784459 -7903395 + L2 LINE L2 3117 3272 0 2866 156 13 4 chr2 242785354 242785816 -7902038 - MER101 LTR ERV1 0 474 9 185 242 226 0 chr2 242786036 242786098 -7901756 + L2 LINE L2 3238 3313 0 222 210 145 0 chr2 242788124 242788186 -7899668 - L2 LINE L2 -229 3084 3014 184 297 16 16 chr2 242788192 242788256 -7899598 - L2 LINE L2 0 3272 3209 255 289 71 66 chr2 242788338 242788535 -7899319 + L2 LINE L2 3097 3294 -19 217 241 0 37 chr2 242788537 242788591 -7899263 + L2 LINE L2 3262 3313 0 278 307 91 27 chr2 242789130 242789459 -7898395 - L1M4 LINE L1 -1906 4240 3891 391 333 79 5 chr2 242789486 242789702 -7898152 - L1M4 LINE L1 -3662 2484 2253 491 196 33 0 chr2 242791397 242791489 -7896365 - MER81 DNA DNA 0 114 20 3522 82 7 0 chr2 242791533 242791995 -7895859 + L1PA8A LINE L1 5603 6067 -64 302 0 0 26 chr2 242792008 242792047 -7895807 + (TAA)n Simple_repeat Simple_repeat 2 39 0 4545 131 12 62 chr2 242792133 242792959 -7894895 - LTR1 LTR ERV1 0 785 1 24 0 0 0 chr2 242793744 242793768 -7894086 + AT_rich Low_complexity Low_complexity 1 24 0 358 244 33 71 chr2 242793903 242794048 -7893806 - L1ME3A LINE L1 -27 6139 5989 2060 117 13 3 chr2 242794890 242795198 -7892656 - AluSx SINE Alu -1 311 1 24 53 0 0 chr2 242795261 242795299 -7892555 + AT_rich Low_complexity Low_complexity 1 38 0 213 289 0 0 chr2 242795704 242795801 -7892053 + (TG)n Simple_repeat Simple_repeat 2 98 0 1101 133 0 18 chr2 242796023 242796189 -7891665 + FRAM SINE Alu 1 163 -3 220 178 22 0 chr2 242796635 242796680 -7891174 + L2 LINE L2 3267 3312 -1 2007 130 0 23 chr2 242796686 242796993 -7890861 + AluSx SINE Alu 1 300 -12 2393 156 46 17 chr2 242797121 242797537 -7890317 - MSTA LTR MaLR 0 428 1 281 320 0 0 chr2 242797577 242797652 -7890202 + CT-rich Low_complexity Low_complexity 4 78 0 458 168 0 11 chr2 242798062 242798157 -7889697 + CT-rich Low_complexity Low_complexity 4 97 0 1147 196 9 0 chr2 242798232 242798457 -7889397 + AluJo SINE Alu 86 312 0 31 26 0 0 chr2 242799582 242799620 -7888234 + AT_rich Low_complexity Low_complexity 1 38 0 279 182 0 0 chr2 242799661 242799716 -7888138 - L1ME4a LINE L1 -4 6117 6063 232 220 0 0 chr2 242799763 242799822 -7888032 - L1ME4a LINE L1 -74 6047 5989 287 267 29 10 chr2 242799885 242799999 -7887855 - L1ME4a LINE L1 -280 5884 5763 21 36 0 0 chr2 242800020 242800048 -7887806 + AT_rich Low_complexity Low_complexity 1 28 0 1835 108 0 51 chr2 242800054 242800394 -7887460 + AluSx SINE Alu 1 325 0 744 259 166 14 chr2 242800481 242800771 -7887083 - LTR16C LTR ERVL 0 491 158 271 288 103 64 chr2 242800907 242801140 -7886714 - L1ME4a LINE L1 -2254 5554 5313 201 206 44 29 chr2 242801199 242801267 -7886587 + T-rich Low_complexity Low_complexity 2 70 0 2240 134 14 22 chr2 242802079 242802444 -7885410 + THE1B LTR MaLR 3 364 0 1447 81 0 33 chr2 242802669 242802880 -7884974 - AluSg/x SINE Alu -11 301 98 1062 246 26 11 chr2 242803024 242803288 -7884566 + MLT1H LTR MaLR 18 285 -264 414 211 54 7 chr2 242803388 242803499 -7884355 + MLT1H LTR MaLR 457 542 -7 461 289 46 62 chr2 242803792 242804052 -7883802 + L3 LINE CR1 1297 1552 -25 1407 227 158 42 chr2 242805101 242805625 -7882229 - MLT1E LTR MaLR -8 585 1 841 162 49 0 chr2 242806641 242806783 -7881071 - MER5A DNA MER1_type -40 149 1 12727 160 24 24 chr2 242806904 242809851 -7878003 - L1MA5 LINE L1 0 6300 3355 1982 104 21 3 chr2 242809851 242810139 -7877715 - AluSx SINE Alu -4 308 16 239 235 0 20 chr2 242810140 242810191 -7877663 - Alu SINE Alu -133 170 121 12727 160 24 24 chr2 242810191 242810809 -7877045 - L1MA5 LINE L1 -2944 3356 2689 1797 178 124 3 chr2 242810816 242811164 -7876690 + MSTB LTR MaLR 36 425 -1 412 176 0 77 chr2 242811168 242811182 -7876672 - MER74A LTR ERVL -2 556 543 2046 89 21 14 chr2 242811182 242811473 -7876381 + AluSg SINE Alu 1 293 -17 412 176 0 77 chr2 242811473 242811549 -7876305 - MER74A LTR ERVL -15 543 473 1220 164 29 29 chr2 242811570 242811808 -7876046 + AluJo SINE Alu 71 308 -4 1765 183 27 3 chr2 242811808 242812136 -7875718 - MER74A LTR ERVL -75 483 148 1372 199 13 96 chr2 242812143 242812244 -7875610 - MLT1A2 LTR MaLR -10 364 256 2250 138 14 30 chr2 242812244 242812613 -7875241 + THE1B LTR MaLR 2 364 0 1372 199 13 96 chr2 242812613 242812908 -7874946 - MLT1A2 LTR MaLR -118 256 1 780 222 6 12 chr2 242812908 242813061 -7874793 - MER74A LTR ERVL -406 152 1 388 186 12 0 chr2 242813118 242813204 -7874650 - LTR37A LTR ERV1 -51 375 289 249 162 14 246 chr2 242813213 242813355 -7874499 - LTR37A LTR ERV1 -241 185 77 250 277 0 0 chr2 242813524 242813589 -7874265 - LTR49-int LTR ERV1 -839 5492 5428 319 183 28 28 chr2 242813620 242813691 -7874163 + MER106B DNA MER1_type 3 73 -986 225 0 0 0 chr2 242813721 242813746 -7874108 + (CA)n Simple_repeat Simple_repeat 2 26 0 971 53 23 40 chr2 242813750 242814467 -7873387 + (TA)n Simple_repeat Simple_repeat 1 704 0 267 192 264 2 chr2 242814467 242814578 -7873276 + MER106A DNA MER1_type 112 225 -11 351 0 0 0 chr2 242814578 242814617 -7873237 + (TAA)n Simple_repeat Simple_repeat 1 39 0 267 192 264 2 chr2 242814617 242814633 -7873221 + MER106A DNA MER1_type 225 236 0 551 222 119 77 chr2 242814697 242814958 -7872896 - LTR49-int LTR ERV1 -847 4089 3818 2585 32 0 6 chr2 242814970 242815283 -7872571 + AluY SINE Alu 1 311 0 225 0 0 0 chr2 242816599 242816624 -7871230 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 608 177 13 19 chr2 242816659 242816817 -7871037 + CT-rich Low_complexity Low_complexity 3 159 0 613 129 14 41 chr2 242816848 242816995 -7870859 + C-rich Low_complexity Low_complexity 3 145 0 285 70 47 0 chr2 242816995 242817038 -7870816 + CT-rich Low_complexity Low_complexity 4 48 0 521 308 88 35 chr2 242817038 242817511 -7870343 - L2 LINE L2 -5 3267 2778 252 316 94 0 chr2 242817781 242817952 -7869902 - L2 LINE L2 -971 2343 2157 266 239 8 94 chr2 242818474 242818591 -7869263 + CT-rich Low_complexity Low_complexity 3 109 0 2341 55 0 3 chr2 242818630 242818923 -7868931 - AluY SINE Alu -15 296 5 183 247 19 104 chr2 242818997 242819151 -7868703 + L2 LINE L2 428 568 -2746 588 260 138 5 chr2 242820367 242820563 -7867291 - MIR SINE MIR -20 242 21 1400 195 145 31 chr2 242821075 242821490 -7866364 - MLT1C LTR MaLR 0 467 6 407 255 161 13 chr2 242821742 242821891 -7865963 - MER5A DNA MER1_type 0 189 19 497 311 120 6 chr2 242823046 242823213 -7864641 - MER91A DNA MER1_type -9 187 2 683 201 88 13 chr2 242823323 242823482 -7864372 - MER58A DNA MER1_type -15 209 39 443 295 67 5 chr2 242823595 242823788 -7864066 + L1MC/D LINE L1 5614 5818 -1990 1336 92 5 0 chr2 242824016 242824200 -7863654 - L1PA8 LINE L1 -134 6038 5854 462 36 0 0 chr2 242824199 242824255 -7863599 + L1P3 LINE L1 5759 5814 -358 * 189 289 0 0 chr2 242824535 242824580 -7863274 - L2 LINE L2 -12 3260 3216 * 732 252 0 13 chr2 242824579 242824738 -7863116 - MIR SINE MIR -89 173 17 378 42 0 0 chr2 242826933 242826981 -7860873 + (TG)n Simple_repeat Simple_repeat 2 49 0 543 329 32 19 chr2 242827310 242827525 -7860329 - MIR SINE MIR -22 240 19 1794 200 76 8 chr2 242827739 242828109 -7859745 - MLT2C1 LTR ERVL -2 395 1 199 71 48 24 chr2 242831575 242831617 -7856237 + T-rich Low_complexity Low_complexity 4 46 0 2554 222 45 36 chr2 242831690 242832504 -7855350 + L1M3 LINE L1 4457 5278 -868 253 231 123 0 chr2 242832659 242832724 -7855130 + MIR SINE MIR 123 195 -67 319 248 216 20 chr2 242832747 242833001 -7854853 + L1M3 LINE L1 5260 5563 -608 2701 95 29 100 chr2 242833118 242833636 -7854218 - L1PB1 LINE L1 -1 6150 5670 203 170 21 0 chr2 242833941 242833988 -7853866 + (TG)n Simple_repeat Simple_repeat 1 48 0 296 297 25 25 chr2 242834420 242834538 -7853316 + MER5A DNA MER1_type 9 126 -63 185 269 75 11 chr2 242835010 242835103 -7852751 + L2 LINE L2 3156 3254 -18 321 244 154 0 chr2 242835197 242835275 -7852579 + L2 LINE L2 3183 3272 0 1684 174 6 23 chr2 242836034 242836378 -7851476 - L1MB3 LINE L1 -1 6182 5845 2606 93 0 0 chr2 242836513 242836868 -7850986 - THE1A LTR MaLR 0 355 1 284 278 56 24 chr2 242837905 242838031 -7849823 - MIR SINE MIR -63 145 16 458 275 113 12 chr2 242839260 242839420 -7848434 - MER5B DNA MER1_type -2 176 1 661 235 26 0 chr2 242839471 242839586 -7848268 - MER5A DNA MER1_type -32 157 36 198 0 0 0 chr2 242839586 242839608 -7848246 + (CTG)n Simple_repeat Simple_repeat 1 22 0 661 235 26 0 chr2 242839608 242839645 -7848209 - MER5A DNA MER1_type -153 36 1 957 228 120 77 chr2 242840234 242840650 -7847204 - MLT1J1 LTR MaLR -9 437 4 1167 216 146 48 chr2 242841103 242841562 -7846292 - L1MC4 LINE L1 -1 8041 7538 * 2255 200 58 26 chr2 242841557 242842182 -7845672 - L1MB3 LINE L1 -825 5321 4677 2107 239 39 7 chr2 242842175 242842791 -7845063 - L1MB3 LINE L1 -3161 2985 2350 * 900 278 25 18 chr2 242843386 242843670 -7844184 - MER69 DNA AcHobo -4 2522 2237 306 292 39 23 chr2 242843886 242844016 -7843838 - MIR SINE MIR -81 181 50 1088 190 46 30 chr2 242847368 242847631 -7840223 - MLT1E3 LTR MaLR 0 624 358 199 291 47 23 chr2 242847733 242847819 -7840035 - L3 LINE CR1 -703 874 787 329 314 48 0 chr2 242847951 242848075 -7839779 + MIR SINE MIR 69 198 -64 254 213 49 0 chr2 242850421 242850482 -7837372 - MER58 DNA MER1_type 0 2420 2357 733 238 31 5 chr2 242850486 242850679 -7837175 - MER58 DNA MER1_type -95 246 49 429 308 95 18 chr2 242850879 242851100 -7836754 + MIR SINE MIR 24 261 -1 7108 116 9 3 chr2 242851123 242852229 -7835625 - L1P LINE L1 -1479 4667 3555 2581 84 0 0 chr2 242852229 242852537 -7835317 - AluSc SINE Alu -1 308 1 6658 68 7 0 chr2 242852563 242854058 -7833796 + L1PA10 LINE L1 4668 6168 0 189 222 67 0 chr2 242854228 242854273 -7833581 + L2 LINE L2 3224 3271 -1 232 338 0 0 chr2 242854477 242854548 -7833306 + (CA)n Simple_repeat Simple_repeat 1 71 0 324 280 51 0 chr2 242854708 242854826 -7833028 - MIR SINE MIR -30 232 109 1316 247 57 46 chr2 242905434 242905823 -7782031 - MLT1E LTR MaLR 0 593 201 1046 82 29 6 chr2 242905841 242906012 -7781842 + (TTTC)n Simple_repeat Simple_repeat 1 175 0 217 129 0 0 chr2 242906013 242906044 -7781810 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 537 191 0 0 chr2 242906044 242906154 -7781700 + CT-rich Low_complexity Low_complexity 2 111 0 724 287 65 26 chr2 242906156 242906463 -7781391 - L2 LINE L2 -864 2450 2132 184 324 42 0 chr2 242906482 242906553 -7781301 - L2 LINE L2 -1154 2160 2087 492 220 60 60 chr2 242906559 242906741 -7781113 - MLT1E LTR MaLR -409 184 3 827 206 32 92 chr2 242906967 242907249 -7780605 + LTR16A1 LTR ERVL 189 453 -4 410 264 230 11 chr2 242907331 242907509 -7780345 + MIR SINE MIR 46 262 0 748 327 59 12 chr2 242908048 242908387 -7779467 - L2 LINE L2 -501 2813 2459 708 146 18 9 chr2 242908388 242908498 -7779356 + FRAM SINE Alu 33 143 -33 180 206 0 0 chr2 242908589 242908623 -7779231 - L2 LINE L2 -999 2315 2282 275 356 38 8 chr2 242908671 242908803 -7779051 - L2 LINE L2 -2881 433 298 893 145 47 23 chr2 242908843 242909015 -7778839 - MLT1B LTR MaLR -191 199 24 488 220 57 43 chr2 242909016 242909157 -7778697 + MIR SINE MIR 96 238 -24 2559 203 69 17 chr2 242909373 242909953 -7777901 - L1ME1 LINE L1 -5 6161 5552 2424 166 61 4 chr2 242910405 242910864 -7776990 - MER31A LTR ERV1 0 485 1 200 292 97 39 chr2 242911475 242911629 -7776225 - MER5A DNA MER1_type -6 183 21 639 270 79 53 chr2 242911687 242912005 -7775849 + LTR52 LTR ERVL 3 328 -93 198 280 183 0 chr2 242912088 242912181 -7775673 - MER5B DNA MER1_type -39 139 30 198 317 267 33 chr2 242912512 242912692 -7775162 + L3 LINE CR1 1338 1559 -18 648 303 0 0 chr2 242913219 242913371 -7774483 - MIR SINE MIR -25 237 86 2762 114 85 67 chr2 242913393 242913983 -7773871 + MER4B LTR ERV1 10 779 0 2011 101 11 3 chr2 242914020 242914306 -7773548 - AluSx SINE Alu -24 288 1 248 286 0 0 chr2 242915064 242915113 -7772741 + L2 LINE L2 3009 3057 -256 423 91 0 0 chr2 242915495 242915550 -7772304 + Alu SINE Alu 1 55 -257 881 286 41 23 chr2 242915730 242916074 -7771780 + MLT1J1 LTR MaLR 1 357 -93 723 289 10 10 chr2 242916841 242917045 -7770809 - MER63A DNA MER1_type 0 210 7 1997 194 67 45 chr2 242918494 242918984 -7768870 - MLT1D LTR MaLR 0 505 5 1486 179 43 92 chr2 242919246 242919638 -7768216 + MLT1A2 LTR MaLR 2 374 0 187 296 115 73 chr2 242920172 242920554 -7767300 + L2 LINE L2 2568 2965 -349 731 169 22 7 chr2 242921132 242921268 -7766586 - ORSL DNA AcHobo 0 275 138 1259 185 18 64 chr2 242921311 242921592 -7766262 - MLT1B LTR MaLR -3 387 120 748 140 0 0 chr2 242921592 242921706 -7766148 - AluSp/q SINE Alu -12 301 188 827 143 0 0 chr2 242921706 242921832 -7766022 - MLT1B LTR MaLR -264 126 1 3648 150 42 52 chr2 242921901 242922635 -7765219 + LTR8A LTR ERV1 1 727 0 2063 110 3 0 chr2 242922887 242923212 -7764642 + AluSg SINE Alu 1 326 0 193 229 66 16 chr2 242923259 242923320 -7764534 - L2 LINE L2 0 3313 3250 2127 101 0 10 chr2 242923882 242924180 -7763674 + AluSg SINE Alu 1 295 -15 996 251 117 38 chr2 242926231 242926598 -7761256 + MSTD LTR MaLR 1 396 0 306 0 0 0 chr2 242926978 242927012 -7760842 + (CA)n Simple_repeat Simple_repeat 2 35 0 295 264 118 0 chr2 242927462 242927572 -7760282 - MLT1I LTR MaLR 0 409 287 255 308 0 11 chr2 242928289 242928380 -7759474 - L1MC4 LINE L1 -1339 6703 6614 1981 163 36 30 chr2 242928636 242928998 -7758856 - THE1B LTR MaLR 0 364 1 12137 81 11 1 chr2 242928998 242930562 -7757292 - THE1B-int LTR MaLR 0 1580 1 2118 148 30 33 chr2 242930562 242930927 -7756927 - THE1B LTR MaLR 0 364 1 1275 184 4 9 chr2 242931249 242931477 -7756377 - AluJo SINE Alu -2 310 84 200 195 232 37 chr2 242932379 242932461 -7755393 + L2 LINE L2 3166 3263 -9 393 173 0 27 chr2 242932473 242932548 -7755306 + MER116 DNA Mariner 2 74 -6 183 264 0 0 chr2 242933113 242933166 -7754688 + CT-rich Low_complexity Low_complexity 76 128 0 1330 177 126 48 chr2 242933378 242933791 -7754063 + LTR56 LTR ERV1 1 445 0 180 333 0 0 chr2 242933838 242933892 -7753962 - MIR SINE MIR -8 254 201 2024 22 0 4 chr2 242934257 242934483 -7753371 - AluY SINE Alu -12 299 75 24 32 0 0 chr2 242934564 242934595 -7753259 + AT_rich Low_complexity Low_complexity 1 31 0 459 250 0 0 chr2 242934970 242935078 -7752776 + MIR3 SINE MIR 87 194 -14 270 0 0 0 chr2 242935281 242935311 -7752543 + (GA)n Simple_repeat Simple_repeat 1 30 0 405 211 113 30 chr2 242935829 242935962 -7751892 + L2 LINE L2 3164 3307 -6 228 208 21 0 chr2 242936181 242936229 -7751625 - MLT1G1 LTR MaLR 0 595 547 2791 266 58 26 chr2 242936254 242936605 -7751249 - L2 LINE L2 -648 2666 2328 1940 168 111 13 chr2 242936605 242936830 -7751024 - MSTB LTR MaLR -1 425 223 2422 97 0 0 chr2 242936830 242937140 -7750714 - AluY SINE Alu -1 310 1 2226 107 0 0 chr2 242937142 242937432 -7750422 - AluSx SINE Alu -18 294 5 1940 168 111 13 chr2 242937432 242937590 -7750264 - MSTB LTR MaLR -203 223 1 2791 266 58 26 chr2 242937590 242938333 -7749521 - L2 LINE L2 -986 2328 1537 308 354 58 0 chr2 242938440 242938646 -7749208 - MIR SINE MIR 0 262 45 319 278 107 8 chr2 242939121 242939247 -7748607 - MIR SINE MIR -62 146 30 470 95 42 0 chr2 242940092 242940187 -7747667 + (TG)n Simple_repeat Simple_repeat 1 99 0 223 265 193 0 chr2 242941434 242941517 -7746337 + MIR SINE MIR 46 144 -118 1777 141 11 3 chr2 242941957 242942240 -7745614 - L1PA15 LINE L1 0 6165 5881 429 330 107 0 chr2 242943059 242943256 -7744598 + L3 LINE CR1 1254 1471 -106 957 249 101 54 chr2 242943260 242943726 -7744128 - MLT1G1 LTR MaLR 0 595 108 24 85 0 0 chr2 242944452 242944511 -7743343 + AT_rich Low_complexity Low_complexity 1 59 0 2168 127 0 0 chr2 242944519 242944810 -7743044 - AluSg SINE Alu -19 291 1 7825 81 2 2 chr2 242944972 242945941 -7741913 - LTR5 LTR ERVK 0 969 1 230 241 19 0 chr2 242945990 242946044 -7741810 - L2 LINE L2 -5 3267 3213 991 208 196 70 chr2 242946112 242946515 -7741339 - MLT1C LTR MaLR -3 464 11 322 335 119 10 chr2 242946515 242946709 -7741145 - MIR SINE MIR -46 216 2 2433 56 0 34 chr2 242947326 242947648 -7740206 - AluY SINE Alu 0 311 1 1089 45 8 8 chr2 242947648 242947782 -7740072 - AluY SINE Alu -177 134 1 198 0 0 0 chr2 242947782 242947804 -7740050 + (T)n Simple_repeat Simple_repeat 1 22 0 232 288 34 68 chr2 242949734 242949880 -7737974 - MER5A DNA MER1_type -28 161 21 25 51 0 0 chr2 242949923 242949962 -7737892 + AT_rich Low_complexity Low_complexity 1 39 0 2266 108 0 0 chr2 242950340 242950626 -7737228 + AluSx SINE Alu 3 288 -24 620 209 15 80 chr2 242950793 242950994 -7736860 - MER20 DNA MER1_type 0 219 32 195 42 0 0 chr2 242951280 242951304 -7736550 + (A)n Simple_repeat Simple_repeat 1 24 0 373 320 67 16 chr2 242951761 242951955 -7735899 + L1ME LINE L1 5602 5805 -316 21 0 0 0 chr2 242951957 242951978 -7735876 + AT_rich Low_complexity Low_complexity 1 21 0 903 139 0 0 chr2 242951978 242952100 -7735754 - AluSg/x SINE Alu -25 285 164 2591 145 26 9 chr2 242952131 242952552 -7735302 - MSTA LTR MaLR 0 428 1 505 252 58 0 chr2 242952661 242952800 -7735054 + MLT1I LTR MaLR 4 150 -259 218 197 0 45 chr2 242952889 242952955 -7734899 + CT-rich Low_complexity Low_complexity 2 64 0 21 36 0 0 chr2 242953260 242953288 -7734566 + AT_rich Low_complexity Low_complexity 1 28 0 2261 100 0 7 chr2 242953335 242953636 -7734218 - AluSc SINE Alu -10 299 1 2138 123 0 3 chr2 242953709 242954002 -7733852 + AluSx SINE Alu 1 292 -20 198 0 0 0 chr2 242954671 242954693 -7733161 + (T)n Simple_repeat Simple_repeat 1 22 0 1993 102 38 24 chr2 242954908 242955201 -7732653 + AluSc SINE Alu 1 297 -12 641 335 10 0 chr2 242955588 242955797 -7732057 + LTR33 LTR ERVL 28 238 -283 477 294 37 0 chr2 242955844 242955980 -7731874 + LTR33 LTR ERVL 362 502 -19 2190 171 113 19 chr2 242956013 242956475 -7731379 - MLT1D LTR MaLR 0 505 1 610 182 0 0 chr2 242956743 242956882 -7730972 + FLAM_A SINE Alu 32 170 0 1126 164 0 0 chr2 242956885 242957062 -7730792 + AluJo/FRAM SINE Alu 136 312 0 227 314 105 40 chr2 242957657 242957781 -7730073 - L2 LINE L2 -4 3268 3137 318 244 149 60 chr2 242958167 242958335 -7729519 - L2 LINE L2 -26 3246 3064 621 327 50 22 chr2 242958777 242958813 -7729041 - L1ME LINE L1 -345 5776 5742 741 291 0 0 chr2 242958813 242959019 -7728835 - MER3 DNA MER1_type -3 206 1 621 327 50 22 chr2 242959019 242959421 -7728433 - L1ME LINE L1 -379 5742 5385 204 189 0 0 chr2 242959768 242959805 -7728049 - MIR SINE MIR 0 262 226 554 97 0 0 chr2 242960084 242960202 -7727652 + AluSg/x SINE Alu 211 328 0 1945 150 0 0 chr2 242960377 242960657 -7727197 + AluSx SINE Alu 1 280 -32 1067 70 17 17 chr2 242960659 242960831 -7727023 + (GAAA)n Simple_repeat Simple_repeat 2 173 0 436 133 24 0 chr2 242960852 242960935 -7726919 + GA-rich Low_complexity Low_complexity 3 87 0 270 352 103 32 chr2 242960937 242961278 -7726576 - MLT1K LTR MaLR -27 561 197 1488 171 97 17 chr2 242961509 242961872 -7725982 + MLT1C LTR MaLR 20 459 -8 308 293 57 0 chr2 242963030 242963136 -7724718 + L2 LINE L2 3202 3313 0 199 345 0 0 chr2 242963284 242963339 -7724515 - L2 LINE L2 -84 3188 3134 215 219 41 0 chr2 242963601 242963674 -7724180 + (TATAA)n Simple_repeat Simple_repeat 2 77 0 2708 89 5 24 chr2 242963837 242964208 -7723646 + THE1B LTR MaLR 1 364 0 449 311 19 15 chr2 242964342 242964548 -7723306 + L2 LINE L2 3103 3309 -4 809 264 40 0 chr2 242964884 242965085 -7722769 + MER63A DNA MER1_type 2 210 0 334 217 140 21 chr2 242965789 242965932 -7721922 + L1ME4a LINE L1 5962 6121 0 1016 243 86 0 chr2 242966235 242966502 -7721352 - LTR55 LTR ERV -9 539 250 325 95 0 0 chr2 242966505 242966547 -7721307 + 5S rRNA rRNA 1 42 -79 1316 142 10 5 chr2 242966599 242966804 -7721050 - LTR55 LTR ERV -340 208 3 1463 308 62 45 chr2 242967120 242968814 -7719040 + L1ME LINE L1 2216 3937 -2209 1830 165 11 62 chr2 242968848 242969217 -7718637 + REP3 LTR ERV 29 378 -184 6777 26 0 0 chr2 242969222 242969992 -7717862 - L1PA3 LINE L1 0 6155 5386 6514 22 0 0 chr2 242969996 242970752 -7717102 + L1PA3 LINE L1 4613 5368 -778 703 201 32 32 chr2 242970753 242970907 -7716947 + REP3 LTR ERV 365 518 -44 318 275 55 51 chr2 242970915 242971277 -7716577 + L1ME LINE L1 5106 5469 -652 1719 232 68 27 chr2 242972705 242973149 -7714705 - MLT1C LTR MaLR 0 467 6 202 316 0 0 chr2 242973296 242973353 -7714501 - L2 LINE L2 0 3313 3257 2581 132 26 26 chr2 242973721 242973763 -7714091 - MSTA LTR MaLR 0 428 387 1885 138 28 3 chr2 242973763 242974052 -7713802 + AluSx SINE Alu 1 296 -16 2581 132 26 26 chr2 242974052 242974435 -7713419 - MSTA LTR MaLR -40 388 3 327 65 0 0 chr2 242974891 242974937 -7712917 + (CA)n Simple_repeat Simple_repeat 1 46 0 387 0 0 0 chr2 242975245 242975288 -7712566 + (CA)n Simple_repeat Simple_repeat 2 44 0 285 29 0 0 chr2 242975287 242975321 -7712533 + (GA)n Simple_repeat Simple_repeat 2 35 0 * 472 130 25 68 chr2 242975342 242975503 -7712351 + CT-rich Low_complexity Low_complexity 3 156 0 2385 66 27 7 chr2 242976248 242976549 -7711305 + AluY SINE Alu 5 311 0 279 254 35 35 chr2 242977991 242978105 -7709749 + MLT1H LTR MaLR 41 154 -395 209 388 53 0 chr2 242978907 242979059 -7708795 - MIR SINE MIR -54 208 49 1704 187 0 0 chr2 242979691 242980010 -7707844 - AluJo SINE Alu 0 323 5 1742 168 13 25 chr2 242980552 242980867 -7706987 + AluJb SINE Alu 1 311 -1 461 252 72 0 chr2 242980893 242981032 -7706822 - L1ME3A LINE L1 -2 6168 6020 354 263 54 54 chr2 242981038 242981243 -7706611 - L1ME3A LINE L1 -198 5972 5768 364 305 11 26 chr2 242981398 242981588 -7706266 - L1MC4 LINE L1 0 8042 7856 445 204 117 0 chr2 242981592 242981695 -7706159 - L1MC4 LINE L1 -815 7227 7113 1757 260 93 72 chr2 242981699 242982753 -7705101 - L1MC4 LINE L1 -98 7944 6869 547 303 201 17 chr2 242983152 242983561 -7704293 + L2 LINE L2 2814 3297 -16 1090 213 145 65 chr2 242983749 242984087 -7703767 - MLT1A1 LTR MaLR 0 365 1 252 233 41 68 chr2 242984541 242984614 -7703240 + L2 LINE L2 3243 3313 0 2302 107 3 0 chr2 242984626 242984936 -7702918 + AluSq SINE Alu 3 313 0 6576 96 11 1 chr2 242985497 242987151 -7700703 - L1PA13 LINE L1 0 6163 4514 2215 113 0 10 chr2 242987280 242987591 -7700263 - AluY SINE Alu -3 308 1 340 277 71 21 chr2 242987649 242987790 -7700064 - L1M4 LINE L1 -2910 3236 3089 279 173 0 0 chr2 242987816 242987868 -7699986 + (CA)n Simple_repeat Simple_repeat 1 52 0 22 0 0 0 chr2 242988932 242988954 -7698900 + AT_rich Low_complexity Low_complexity 1 22 0 227 236 180 0 chr2 242988954 242989043 -7698811 - MER103 DNA DNA 0 166 62 2361 50 36 13 chr2 242990588 242990890 -7696964 + AluY SINE Alu 3 311 0 2110 107 0 3 chr2 242991167 242991491 -7696363 + AluSx SINE Alu 1 323 0 436 335 25 31 chr2 242991953 242992114 -7695740 + MER5B DNA MER1_type 18 177 -1 2257 81 3 0 chr2 242992617 242992924 -7694930 - AluSx SINE Alu 0 308 1 321 301 0 23 chr2 242993327 242993460 -7694394 - L1ME3A LINE L1 -491 5630 5501 387 103 17 0 chr2 242993827 242993885 -7693969 + MADE1 DNA Mariner 1 59 -21 271 209 45 0 chr2 242994471 242994538 -7693316 + L1MC5 LINE L1 7815 7884 -77 2400 89 0 10 chr2 242994820 242995133 -7692721 + AluSg SINE Alu 1 310 0 211 233 0 0 chr2 242995563 242995606 -7692248 + (TG)n Simple_repeat Simple_repeat 1 43 0 229 279 125 29 chr2 242996051 242996187 -7691667 - MIR SINE MIR -64 198 50 436 224 45 45 chr2 242996188 242996344 -7691510 + L1MC5 LINE L1 7776 7931 -30 21 0 0 0 chr2 242997601 242997622 -7690232 + AT_rich Low_complexity Low_complexity 1 21 0 207 323 16 55 chr2 242999070 242999197 -7688657 + L2 LINE L2 2644 2765 -549 363 315 97 6 chr2 242999546 242999711 -7688143 + MIR SINE MIR 79 258 -4 280 276 52 69 chr2 242999731 242999905 -7687949 + L2 LINE L2 2944 3114 -158 312 350 67 0 chr2 243000054 243000174 -7687680 + L2 LINE L2 3118 3245 -27 2108 185 44 17 chr2 243000415 243000858 -7686996 - MLT2B2 LTR ERVL -48 472 1 9144 119 81 35 chr2 243001153 243002773 -7685081 - pTR5 LTR ERV1 0 2438 744 228 286 32 0 chr2 243002839 243002902 -7684952 + MIR SINE MIR 5 69 -193 180 0 0 0 chr2 243003237 243003257 -7684597 + (CA)n Simple_repeat Simple_repeat 1 20 0 278 321 12 0 chr2 243004560 243004644 -7683210 + MIR3 SINE MIR 109 193 -15 1613 316 116 34 chr2 243005070 243006062 -7681792 + L2 LINE L2 1285 2195 -1119 1486 142 0 21 chr2 243006062 243006301 -7681553 - AluSg/x SINE Alu -7 305 72 1613 316 116 34 chr2 243006301 243006714 -7681140 + L2 LINE L2 2195 2816 -498 2315 88 0 30 chr2 243006714 243007019 -7680835 + AluY SINE Alu 1 296 -15 1613 316 116 34 chr2 243007019 243007071 -7680783 + L2 LINE L2 2816 2862 -452 288 277 12 0 chr2 243007094 243007177 -7680677 + MER94 DNA DNA 33 116 -18 502 296 36 139 chr2 243007190 243007606 -7680248 + L2 LINE L2 2900 3272 0 1488 276 79 24 chr2 243007626 243008118 -7679736 + LTR40a LTR ERVL 1 519 0 264 300 118 18 chr2 243008546 243008656 -7679198 + MIR SINE MIR 16 136 -72 215 218 18 0 chr2 243008660 243008715 -7679139 + (TTCA)n Simple_repeat Simple_repeat 3 58 0 202 295 45 98 chr2 243008735 243008979 -7678875 - L2 LINE L2 -97 3175 2945 634 244 153 7 chr2 243010312 243010586 -7677268 - HAL1 LINE L1 -82 2425 2112 432 221 57 33 chr2 243010603 243010725 -7677129 + MLT1I LTR MaLR 1 125 -284 1141 329 80 42 chr2 243010818 243011456 -7676398 + L1MB1 LINE L1 1596 2257 -5229 2433 262 82 11 chr2 243011601 243012698 -7675156 + L1MB1 LINE L1 2078 3127 -4438 8991 189 51 35 chr2 243012833 243015917 -7671937 + L1M2b LINE L1 6 3538 -3670 194 62 31 0 chr2 243015917 243015949 -7671905 + (TA)n Simple_repeat Simple_repeat 1 33 0 8991 189 51 35 chr2 243015949 243016980 -7670874 + L1M2b LINE L1 3538 4552 -2656 5171 37 2 0 chr2 243017002 243017576 -7670278 + L1PA5 LINE L1 5580 6154 0 285 83 0 0 chr2 243017578 243017614 -7670240 + FRAM/FAM SINE Alu 54 89 -86 5375 140 8 12 chr2 243017614 243018477 -7669377 + L1MA4A LINE L1 5438 6297 -6 21 0 0 0 chr2 243018501 243018522 -7669332 + AT_rich Low_complexity Low_complexity 1 21 0 13025 203 33 23 chr2 243018529 243022794 -7665060 + L1MB1 LINE L1 3266 7587 0 441 308 0 0 chr2 243022850 243022970 -7664884 + MLT1I LTR MaLR 288 407 -2 478 231 172 42 chr2 243022974 243023212 -7664642 - HAL1 LINE L1 -428 2079 1811 576 269 14 0 chr2 243023302 243023443 -7664411 + MLT1J LTR MaLR 102 244 -267 1074 225 9 22 chr2 243023447 243023669 -7664185 - MER20 DNA MER1_type 0 219 1 676 286 62 0 chr2 243023677 243023855 -7663999 - MER5A DNA MER1_type 0 189 1 669 293 136 34 chr2 243024918 243025359 -7662495 - L2 LINE L2 0 3313 2828 1938 183 34 3 chr2 243026200 243026555 -7661299 + MLT2D LTR ERVL 1 366 -48 2738 82 0 0 chr2 243026555 243026922 -7660932 - L1PA7 LINE L1 -853 5293 4927 7265 58 1 0 chr2 243026922 243027781 -7660073 + L1PA7 LINE L1 5291 6151 -3 228 91 136 0 chr2 243027794 243027838 -7660016 + MLT2D LTR ERVL 501 550 -4 437 282 0 0 chr2 243027861 243027964 -7659890 - MIR SINE MIR -113 149 47 267 216 13 35 chr2 243030958 243031062 -7656792 + L1ME LINE L1 5338 5439 -682 473 290 65 12 chr2 243031366 243031535 -7656319 + MER5B DNA MER1_type 1 178 0 270 222 48 0 chr2 243031822 243031885 -7655969 + GA-rich Low_complexity Low_complexity 3 68 0 1216 230 37 21 chr2 243032341 243032667 -7655187 - MLT1A1 LTR MaLR -23 342 12 1948 192 43 41 chr2 243032990 243033460 -7654394 - MLT2D LTR ERVL -2 518 1 26 50 0 0 chr2 243033486 243033526 -7654328 + AT_rich Low_complexity Low_complexity 1 40 0 1300 47 0 0 chr2 243033829 243033979 -7653875 - L1PA4 LINE L1 -6 6149 6000 2215 36 1 6 chr2 243033979 243034313 -7653541 + L1ME LINE L1 5130 5461 -660 24 0 0 0 chr2 243034624 243034648 -7653206 + AT_rich Low_complexity Low_complexity 1 24 0 345 334 118 30 chr2 243035029 243035532 -7652322 + L2 LINE L2 2607 3203 -110 3377 220 12 8 chr2 243035832 243036482 -7651372 + MER82 DNA MER2_type 1 653 0 390 344 57 22 chr2 243036487 243036671 -7651183 + MIR3 SINE MIR 9 207 -1 262 239 30 0 chr2 243037075 243037142 -7650712 + MIR SINE MIR 81 149 -113 194 370 87 0 chr2 243037274 243037366 -7650488 + L2 LINE L2 3134 3233 -39 1114 149 128 3 chr2 243037366 243037461 -7650393 - LTR47A LTR ERVL 0 452 370 248 0 31 0 chr2 243037461 243037493 -7650361 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1114 149 128 3 chr2 243037493 243037725 -7650129 - LTR47A LTR ERVL -82 370 1 204 40 0 0 chr2 243038615 243038640 -7649214 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 522 114 0 0 chr2 243038639 243038718 -7649136 + (CA)n Simple_repeat Simple_repeat 1 79 0 261 331 61 61 chr2 243038856 243039037 -7648817 + MIR SINE MIR 70 250 -12 306 257 118 59 chr2 243039125 243039277 -7648577 + L2 LINE L2 3150 3310 -3 21 36 0 0 chr2 243039500 243039528 -7648326 + AT_rich Low_complexity Low_complexity 1 28 0 358 332 57 46 chr2 243040024 243040394 -7647460 - L2 LINE L2 -69 3203 2830 21 57 0 0 chr2 243040927 243040962 -7646892 + AT_rich Low_complexity Low_complexity 1 35 0 342 188 30 10 chr2 243042032 243042133 -7645721 + CT-rich Low_complexity Low_complexity 5 107 0 251 325 44 48 chr2 243042167 243042373 -7645481 - MLT1K LTR MaLR -158 430 226 36 40 0 0 chr2 243042390 243042440 -7645414 + AT_rich Low_complexity Low_complexity 1 50 0 3861 179 41 28 chr2 243042472 243043206 -7644648 - L1MB7 LINE L1 -2 6182 5263 1840 159 10 0 chr2 243043206 243043502 -7644352 - AluSx SINE Alu -13 299 1 3861 179 41 28 chr2 243043502 243043903 -7643951 - L1MB7 LINE L1 -921 5263 4869 2762 29 0 3 chr2 243045419 243045731 -7642123 + AluY SINE Alu 1 311 0 630 69 0 23 chr2 243045863 243045950 -7641904 - L1MA3 LINE L1 -2 6303 6219 313 340 21 0 chr2 243046143 243046284 -7641570 - MIR SINE MIR -43 219 76 658 279 39 39 chr2 243046521 243046749 -7641105 - MARNA DNA Mariner -93 493 266 2187 201 52 54 chr2 243046749 243047109 -7640745 - MLT1F LTR MaLR 0 542 182 249 33 0 0 chr2 243047109 243047139 -7640715 + (GA)n Simple_repeat Simple_repeat 1 30 0 2187 201 52 54 chr2 243047139 243047316 -7640538 - MLT1F LTR MaLR -360 182 6 267 350 100 12 chr2 243047328 243047488 -7640366 - MARNA DNA Mariner -322 264 91 2225 116 0 0 chr2 243048392 243048685 -7639169 - AluSq SINE Alu -20 293 1 203 308 176 39 chr2 243048723 243049110 -7638744 + L2 LINE L2 2140 2579 -735 340 292 149 61 chr2 243049583 243050028 -7637826 + L2 LINE L2 2764 3271 -1 2237 99 3 0 chr2 243050819 243051111 -7636743 - AluSq SINE Alu -20 293 1 209 258 101 34 chr2 243051330 243051419 -7636435 + L2 LINE L2 3180 3274 -39 212 236 18 18 chr2 243051812 243051867 -7635987 - L2 LINE L2 0 3313 3259 3554 193 14 33 chr2 243052537 243053202 -7634652 + MER82 DNA MER2_type 2 653 0 216 0 0 0 chr2 243055079 243055103 -7632751 + (TTG)n Simple_repeat Simple_repeat 2 25 0 2289 81 30 3 chr2 243055298 243055596 -7632258 - AluY SINE Alu -5 306 1 609 208 8 0 chr2 243055628 243055748 -7632106 + L1MC2 LINE L1 6015 6135 -209 673 185 0 75 chr2 243055751 243055897 -7631957 + L1MC2 LINE L1 6200 6334 -10 393 302 125 54 chr2 243056345 243057396 -7630458 - L1MB7 LINE L1 -1370 4776 3652 279 54 0 0 chr2 243057496 243057533 -7630321 + (TA)n Simple_repeat Simple_repeat 1 37 0 10489 39 0 1 chr2 243057533 243059473 -7628381 - L1PA5 LINE L1 -9 6145 4185 25 65 0 0 chr2 243059537 243059583 -7628271 + AT_rich Low_complexity Low_complexity 1 46 0 1798 179 18 59 chr2 243061276 243061666 -7626188 - MLT1A2 LTR MaLR 0 374 1 1241 198 27 12 chr2 243062639 243062897 -7624957 + L1MC1 LINE L1 168 429 -5997 7194 190 75 40 chr2 243062903 243064433 -7623421 + L1MC1 LINE L1 795 2270 -4156 549 67 0 111 chr2 243064433 243064472 -7623382 + MADE1 DNA Mariner 1 26 -54 2372 98 0 0 chr2 243064472 243064767 -7623087 - AluSc SINE Alu -14 295 1 549 67 0 111 chr2 243064767 243064817 -7623037 + MADE1 DNA Mariner 26 80 0 7194 190 75 40 chr2 243064817 243066458 -7621396 + L1MC1 LINE L1 2270 4064 -2362 233 304 81 14 chr2 243066457 243066605 -7621249 + L1MC1 LINE L1 4861 5018 -1408 * 5717 156 29 7 chr2 243066601 243067578 -7620276 + L1MC1 LINE L1 5610 6609 -4 2354 168 42 14 chr2 243067657 243068085 -7619769 - MLT1D LTR MaLR 0 505 66 2251 156 30 0 chr2 243068085 243068456 -7619398 + MLT1B LTR MaLR 1 382 -8 358 177 0 89 chr2 243068460 243068539 -7619315 - MLT1D LTR MaLR -433 72 1 504 285 89 6 chr2 243068599 243068757 -7619097 - MIR SINE MIR -57 205 35 2177 88 34 0 chr2 243068901 243069196 -7618658 - AluY SINE Alu -6 305 1 1399 249 54 62 chr2 243070922 243071388 -7616466 + MLT1C LTR MaLR 6 467 0 1290 224 98 38 chr2 243072021 243072441 -7615413 + MLT1C LTR MaLR 21 465 -2 299 305 112 15 chr2 243072457 243072654 -7615200 - L1ME LINE L1 -294 5827 5612 24 0 0 0 chr2 243073762 243073786 -7614068 + AT_rich Low_complexity Low_complexity 1 24 0 471 319 0 0 chr2 243073881 243074286 -7613568 + (CA)n Simple_repeat Simple_repeat 1 405 0 372 380 0 11 chr2 243074308 243074487 -7613367 + (CACG)n Simple_repeat Simple_repeat 3 179 0 270 259 53 23 chr2 243074925 243075056 -7612798 + MLT1L LTR MaLR 146 280 -335 262 295 67 60 chr2 243075257 243075406 -7612448 - MIR3 SINE MIR -45 163 14 1675 163 58 3 chr2 243075592 243075886 -7611968 - AluJo SINE Alu -2 310 1 300 53 0 0 chr2 243076271 243076309 -7611545 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1673 220 52 38 chr2 243077098 243077481 -7610373 + MLT1C LTR MaLR 40 431 -36 1994 186 3 17 chr2 243077481 243077826 -7610028 + MER2 DNA MER2_type 1 340 -4 1673 220 52 38 chr2 243077826 243077864 -7609990 + MLT1C LTR MaLR 431 467 0 917 216 77 10 chr2 243077906 243078100 -7609754 - MLT1E LTR MaLR 0 593 387 2182 119 0 3 chr2 243078262 243078564 -7609290 + AluSx SINE Alu 1 301 -11 309 284 25 0 chr2 243078920 243079001 -7608853 - L2 LINE L2 -7 3306 3224 303 233 0 0 chr2 243079260 243079363 -7608491 + GA-rich Low_complexity Low_complexity 1 103 0 423 0 0 0 chr2 243079367 243079414 -7608440 + (CA)n Simple_repeat Simple_repeat 2 48 0 385 312 89 0 chr2 243079668 243079825 -7608029 + MIR SINE MIR 86 256 -6 246 363 65 0 chr2 243080279 243080403 -7607451 + MIR3 SINE MIR 2 133 -75 441 0 0 0 chr2 243080863 243080912 -7606942 + (TC)n Simple_repeat Simple_repeat 2 50 0 1967 143 3 7 chr2 243081745 243082038 -7605816 + AluJo SINE Alu 1 292 -20 1178 159 52 52 chr2 243082399 243082707 -7605147 + L1MA8 LINE L1 5984 6291 0 666 296 81 42 chr2 243082726 243083158 -7604696 + HAL1b LINE L1 188 636 -712 183 128 0 26 chr2 243083907 243083946 -7603908 + MIR SINE MIR 99 136 -72 214 298 96 53 chr2 243084406 243084500 -7603354 - MER5A DNA MER1_type -83 106 9 5853 67 15 11 chr2 243084566 243085303 -7602551 + L1PA8 LINE L1 5420 6159 -13 1537 115 26 115 chr2 243085314 243085653 -7602201 - L1MA7 LINE L1 -2 6289 5981 2737 32 0 3 chr2 243086335 243086647 -7601207 - AluY SINE Alu 0 311 1 827 206 228 18 chr2 243087172 243087448 -7600406 + MLT2F LTR ERVL 6 339 -324 974 195 28 104 chr2 243087467 243087887 -7599967 + MLT2F LTR ERVL 222 663 0 257 205 34 0 chr2 243087916 243088033 -7599821 + (TA)n Simple_repeat Simple_repeat 1 121 0 391 216 90 36 chr2 243088294 243088405 -7599449 - L2 LINE L2 -6 3307 3191 565 229 34 50 chr2 243089635 243089820 -7598034 + MLT1F LTR MaLR 2 188 -379 945 235 35 25 chr2 243089820 243090139 -7597715 - L1MEc LINE L1 -3534 2681 2360 356 306 40 0 chr2 243090198 243090322 -7597532 - L1MEc LINE L1 -3848 2367 2239 1633 201 15 41 chr2 243090343 243090732 -7597122 - MLT2C1 LTR ERVL -18 379 1 352 231 40 81 chr2 243090749 243090922 -7596932 - L1MEc LINE L1 -4128 2268 2103 2545 273 110 43 chr2 243090941 243091080 -7596774 - L1MEc LINE L1 -4775 1621 1493 2181 103 0 0 chr2 243091080 243091395 -7596459 - AluSg SINE Alu 0 315 1 2545 273 110 43 chr2 243091395 243092157 -7595697 - L1MEc LINE L1 -4903 1493 784 2735 13 0 7 chr2 243092157 243092462 -7595392 - AluYa5 SINE Alu -8 303 1 2545 273 110 43 chr2 243092462 243093057 -7594797 - L1MEc LINE L1 -5612 784 22 1662 250 40 14 chr2 243093812 243094240 -7593614 - LTR47B LTR ERVL 0 443 5 1146 221 74 106 chr2 243094626 243095100 -7592754 + MLT1J LTR MaLR 3 461 -50 233 128 0 43 chr2 243095102 243095149 -7592705 + L1MC4 LINE L1 6659 6703 -1339 238 178 0 0 chr2 243095179 243095224 -7592630 + LTR66 LTR ERVL 394 438 -172 262 222 83 0 chr2 243095225 243095297 -7592557 - L1MC4 LINE L1 -1351 6691 6614 248 209 45 0 chr2 243095297 243095364 -7592490 + (CATATA)n Simple_repeat Simple_repeat 4 73 0 213 39 0 0 chr2 243095371 243095397 -7592457 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 243 0 0 0 chr2 243095396 243095423 -7592431 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 369 0 0 0 chr2 243095422 243095463 -7592391 + (GA)n Simple_repeat Simple_repeat 2 42 0 2078 118 0 7 chr2 243095464 243095744 -7592110 - AluSq SINE Alu -35 278 1 258 274 14 0 chr2 243095840 243095913 -7591941 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 2070 247 50 14 chr2 243096274 243096793 -7591061 + MLT1F LTR MaLR 1 538 -4 402 294 68 25 chr2 243098058 243098221 -7589633 + MIR SINE MIR 25 194 -68 183 373 16 0 chr2 243099251 243099377 -7588477 + MIR SINE MIR 18 145 -117 249 324 0 0 chr2 243099496 243099567 -7588287 + MIR SINE MIR 156 226 -36 2144 131 3 3 chr2 243100325 243100631 -7587223 - AluSx SINE Alu -6 306 1 1851 135 53 0 chr2 243101325 243101607 -7586247 - AluSx SINE Alu -15 297 1 2474 191 127 6 chr2 243101936 243102433 -7585421 - MER41D LTR ERV1 0 557 1 216 158 0 0 chr2 243103712 243103750 -7584104 + T-rich Low_complexity Low_complexity 1 38 0 278 208 208 0 chr2 243104002 243104074 -7583780 + MIR SINE MIR 5 91 -171 1949 191 3 3 chr2 243104106 243104452 -7583402 - MER57A LTR ERV1 -4 399 54 965 237 96 106 chr2 243105250 243105279 -7582575 + MER74A LTR ERVL 67 95 -463 2057 122 3 20 chr2 243105279 243105583 -7582271 - AluSg SINE Alu -11 299 1 965 237 96 106 chr2 243105583 243106034 -7581820 + MER74A LTR ERVL 95 542 -16 910 250 77 0 chr2 243106450 243106670 -7581184 - MLT1E LTR MaLR 0 593 357 1789 216 78 37 chr2 243158098 243158583 -7529271 + MLT1D LTR MaLR 1 505 0 279 247 39 13 chr2 243158594 243158671 -7529183 - LTR67 LTR ERVL -6 551 473 1583 95 13 17 chr2 243159869 243160101 -7527753 - AluSq SINE Alu -4 309 79 4279 179 33 7 chr2 243160374 243161229 -7526625 + L1MB7 LINE L1 5288 6164 -20 2318 103 0 0 chr2 243161248 243161560 -7526294 + AluSx SINE Alu 1 312 0 209 194 0 0 chr2 243161803 243161839 -7526015 + A-rich Low_complexity Low_complexity 1 36 0 1570 225 59 45 chr2 243162675 243163109 -7524745 - MLT1C LTR MaLR -4 463 6 418 143 39 0 chr2 243163857 243163934 -7523920 + Alu SINE Alu 226 305 -5 869 161 17 46 chr2 243163934 243164108 -7523746 + MLT2D LTR ERVL 198 366 -48 297 132 75 0 chr2 243164152 243164205 -7523649 + MLT2D LTR ERVL 464 520 0 1906 183 42 5 chr2 243164243 243164352 -7523502 + L1MC3 LINE L1 7359 7463 -322 1781 132 37 0 chr2 243164352 243164655 -7523199 + AluSx SINE Alu 1 313 0 1906 183 42 5 chr2 243164655 243164953 -7522901 + L1MC3 LINE L1 7463 7782 -3 2871 88 0 3 chr2 243165443 243165808 -7522046 - THE1B LTR MaLR 0 364 1 312 227 121 8 chr2 243165827 243165959 -7521895 - L1ME4a LINE L1 -7 6114 5968 1873 134 3 3 chr2 243166002 243166293 -7521561 + AluSq SINE Alu 3 293 -20 396 40 0 0 chr2 243167385 243167435 -7520419 + (TG)n Simple_repeat Simple_repeat 2 51 0 1020 304 153 30 chr2 243167682 243168780 -7519074 + L2 LINE L2 1942 3181 -132 226 312 55 18 chr2 243169678 243169787 -7518067 - MER5A DNA MER1_type -28 161 49 2141 105 0 0 chr2 243170349 243170644 -7517210 - AluSg SINE Alu -13 297 3 184 300 78 0 chr2 243171418 243171508 -7516346 - MIR SINE MIR -122 140 44 188 341 92 21 chr2 243171830 243172073 -7515781 + L2 LINE L2 2844 3094 -178 182 242 61 15 chr2 243173719 243173785 -7514069 - MER5A DNA MER1_type -99 90 22 2367 90 3 0 chr2 243174580 243174881 -7512973 - AluSx SINE Alu -10 302 1 373 242 154 27 chr2 243175962 243176111 -7511743 + MIR SINE MIR 88 255 -7 2244 119 3 0 chr2 243176332 243176634 -7511220 + AluSx SINE Alu 1 303 -9 473 111 56 0 chr2 243176858 243176930 -7510924 - MER39B LTR ERV1 0 653 578 636 188 0 0 chr2 243176931 243177032 -7510822 + AluS SINE Alu 2 102 -211 1957 96 121 4 chr2 243177420 243177700 -7510154 + AluSq SINE Alu 1 313 0 373 35 52 0 chr2 243177705 243177763 -7510091 + (GAAA)n Simple_repeat Simple_repeat 4 64 0 998 17 0 0 chr2 243177921 243178037 -7509817 - L1PA2 LINE L1 0 6155 6040 205 296 0 12 chr2 243178145 243178226 -7509628 + CT-rich Low_complexity Low_complexity 2 81 0 584 294 33 38 chr2 243178713 243178924 -7508930 + MIR SINE MIR 2 211 -51 263 213 188 12 chr2 243179099 243179179 -7508675 + MIR SINE MIR 99 192 -70 268 59 0 0 chr2 243179299 243179333 -7508521 + AluSp/q SINE Alu 238 271 -32 2371 94 13 0 chr2 243179494 243179792 -7508062 - AluSq SINE Alu -11 302 1 412 288 81 45 chr2 243180715 243180913 -7506941 + MIR SINE MIR 34 238 -24 327 336 19 0 chr2 243181184 243181291 -7506563 + L1 LINE L1 4841 4949 -1197 526 272 65 40 chr2 243181362 243181562 -7506292 + L1ME3A LINE L1 5603 5807 -355 343 259 63 7 chr2 243181567 243181710 -7506144 - L1M4 LINE L1 -1380 4766 4616 317 284 31 131 chr2 243181711 243182031 -7505823 + L1ME3A LINE L1 5872 6159 -11 402 306 42 7 chr2 243182049 243182193 -7505661 + L1 LINE L1 5149 5297 -849 5862 128 95 27 chr2 243182204 243182458 -7505396 + Tigger3b DNA MER2_type 28 263 -2765 189 0 0 0 chr2 243182458 243182479 -7505375 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 759 52 0 0 chr2 243182478 243182574 -7505280 + (TA)n Simple_repeat Simple_repeat 2 97 0 5862 128 95 27 chr2 243182479 243182998 -7504856 + Tigger3b DNA MER2_type 263 745 -2283 2239 112 0 43 chr2 243182998 243183321 -7504533 - AluSx SINE Alu -3 309 1 5862 128 95 27 chr2 243183321 243183492 -7504362 + Tigger3b DNA MER2_type 745 903 -2125 2265 101 24 0 chr2 243183492 243183788 -7504066 - AluSc SINE Alu -6 303 1 5862 128 95 27 chr2 243183788 243184063 -7503791 + Tigger3b DNA MER2_type 903 1231 0 385 291 0 18 chr2 243184065 243184175 -7503679 + (CATA)n Simple_repeat Simple_repeat 3 110 0 280 325 13 0 chr2 243184175 243184335 -7503519 + L1P5 LINE L1 5316 5479 -672 2039 137 3 3 chr2 243184447 243184731 -7503123 + AluSx SINE Alu 3 286 -26 218 175 0 48 chr2 243186052 243186141 -7501713 + (CGCGG)n Simple_repeat Simple_repeat 1 84 0 243 65 0 81 chr2 243186163 243186225 -7501629 + (CGGGG)n Simple_repeat Simple_repeat 2 58 0 40 73 0 0 chr2 243186597 243186679 -7501175 + GC_rich Low_complexity Low_complexity 1 82 0 333 47 0 0 chr2 243187366 243187409 -7500445 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 186 71 0 0 chr2 243188162 243188190 -7499664 + (A)n Simple_repeat Simple_repeat 1 28 0 1560 151 7 32 chr2 243189074 243189359 -7498495 - AluSx SINE Alu -34 278 1 314 315 0 22 chr2 243190537 243190626 -7497228 + MIR SINE MIR 18 104 -158 1453 146 41 0 chr2 243191308 243191527 -7496327 - AluJo SINE Alu -10 302 75 2344 85 0 16 chr2 243192222 243192527 -7495327 - AluSc SINE Alu -9 300 1 2581 67 3 6 chr2 243193223 243193537 -7494317 - AluSp SINE Alu 0 313 1 345 297 39 58 chr2 243194138 243194293 -7493561 + MER5A DNA MER1_type 38 189 0 2391 89 0 10 chr2 243195082 243195395 -7492459 + AluSx SINE Alu 3 312 0 1532 188 10 10 chr2 243195411 243195714 -7492140 + MLT1A1 LTR MaLR 1 303 -62 1791 171 13 7 chr2 243195714 243196012 -7491842 + AluJo SINE Alu 1 300 -12 586 105 19 9 chr2 243196013 243196118 -7491736 + (GGAA)n Simple_repeat Simple_repeat 4 109 0 1654 55 5 5 chr2 243196188 243196388 -7491466 - AluY SINE Alu -8 303 104 278 182 18 0 chr2 243196391 243196446 -7491408 - MER94 DNA DNA -77 57 2 345 314 69 19 chr2 243197346 243197505 -7490349 - L1M4 LINE L1 -804 5342 5176 207 0 0 0 chr2 243197513 243197536 -7490318 + (TA)n Simple_repeat Simple_repeat 2 24 0 2223 106 0 0 chr2 243197796 243198079 -7489775 - AluSq SINE Alu -30 283 1 472 284 85 20 chr2 243199949 243200150 -7487704 - L2 LINE L2 -14 3299 3086 2603 40 7 10 chr2 243201332 243201632 -7486222 - AluY SINE Alu -12 299 1 417 283 94 28 chr2 243201642 243201854 -7486000 - L2 LINE L2 -5 3308 3083 3665 121 43 0 chr2 243201983 243202512 -7485342 - MER41A LTR ERV1 -2 552 1 2534 67 3 0 chr2 243202591 243202890 -7484964 - AluSp SINE Alu -13 300 1 367 306 74 29 chr2 243203310 243203621 -7484233 - L1ME4a LINE L1 -202 5919 5595 690 268 49 27 chr2 243205548 243205772 -7482082 + MIR SINE MIR 34 262 0 425 257 106 0 chr2 243206051 243206164 -7481690 + L2 LINE L2 3148 3272 0 476 285 71 7 chr2 243207778 243207988 -7479866 - MIR SINE MIR -9 253 23 2174 129 0 3 chr2 243208056 243208359 -7479495 + AluSx SINE Alu 1 302 -10 238 319 0 80 chr2 243208689 243208827 -7479027 + MIR SINE MIR 84 210 -52 198 274 0 20 chr2 243209478 243209529 -7478325 - L2 LINE L2 -84 3229 3180 734 277 102 70 chr2 243210458 243210957 -7476897 + MLT1L LTR MaLR 7 521 -94 286 343 29 0 chr2 243211287 243211389 -7476465 - MIR SINE MIR -2 260 156 243 88 0 0 chr2 243211422 243211456 -7476398 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 537 329 27 31 chr2 243211474 243211696 -7476158 - MIR SINE MIR -18 244 24 356 213 12 0 chr2 243211907 243211987 -7475867 - MER5A DNA MER1_type -83 106 26 1019 196 48 0 chr2 243212098 243212307 -7475547 + MER20 DNA MER1_type 1 219 0 986 280 31 49 chr2 243212312 243212566 -7475288 + L2 LINE L2 2932 3178 -135 1851 185 62 90 chr2 243212566 243213086 -7474768 - MLT1D LTR MaLR 0 505 1 986 280 31 49 chr2 243213086 243213220 -7474634 + L2 LINE L2 3178 3313 0 2017 182 81 9 chr2 243213664 243214099 -7473755 - MLT1C LTR MaLR 0 467 2 5002 155 16 16 chr2 243214293 243215246 -7472608 - L1P LINE L1 -1325 4821 3869 1609 89 0 61 chr2 243215275 243215521 -7472333 + AluSq SINE Alu 53 283 -30 22 0 0 0 chr2 243215545 243215567 -7472287 + AT_rich Low_complexity Low_complexity 1 22 0 411 296 31 31 chr2 243215763 243215922 -7471932 + MIR SINE MIR 30 188 -74 202 205 0 0 chr2 243216448 243216487 -7471367 + T-rich Low_complexity Low_complexity 5 43 0 201 269 0 0 chr2 243216666 243216733 -7471121 + (TA)n Simple_repeat Simple_repeat 1 67 0 1792 172 0 41 chr2 243216898 243217212 -7470642 - AluJo SINE Alu -11 301 1 376 262 110 72 chr2 243217635 243217671 -7470183 + MIR SINE MIR 2 35 -227 2295 126 0 0 chr2 243217671 243217981 -7469873 + AluSx SINE Alu 1 310 -2 376 262 110 72 chr2 243217981 243218181 -7469673 + MIR SINE MIR 35 247 -15 3823 105 0 4 chr2 243219003 243219516 -7468338 + MER9 LTR ERVK 1 511 0 248 177 0 0 chr2 243220095 243220141 -7467713 - LTR16B LTR ERVL -2 462 417 1153 193 127 49 chr2 243220145 243220462 -7467392 - MLT1C LTR MaLR 0 467 119 2073 88 57 40 chr2 243220462 243220758 -7467096 - AluSq SINE Alu -12 301 1 1153 193 127 49 chr2 243220758 243220787 -7467067 - MLT1C LTR MaLR -348 119 94 2062 139 58 29 chr2 243220824 243221168 -7466686 - THE1B LTR MaLR -8 356 3 523 76 54 65 chr2 243221171 243221221 -7466633 - MLT1C LTR MaLR -376 91 41 1352 216 109 61 chr2 243221221 243221716 -7466138 - MLT2B1 LTR ERVL 0 520 2 523 76 54 65 chr2 243221716 243221757 -7466097 - MLT1C LTR MaLR -426 41 1 501 283 57 38 chr2 243221757 243222070 -7465784 - LTR16B LTR ERVL -47 417 99 661 266 24 68 chr2 243222284 243222374 -7465480 + MIR SINE MIR 20 112 -150 2176 108 0 0 chr2 243222374 243222671 -7465183 - AluSx SINE Alu -15 297 1 661 266 24 68 chr2 243222671 243222828 -7465026 + MIR SINE MIR 112 256 -6 1978 108 3 0 chr2 243223755 243224043 -7463811 + L1PA8 LINE L1 4767 5055 -1091 1337 116 65 20 chr2 243224287 243224501 -7463353 + L1PA8 LINE L1 5032 5264 -882 6880 52 28 1 chr2 243224501 243225386 -7462468 + L1PA8 LINE L1 5254 6162 -10 1337 116 65 20 chr2 243225386 243225427 -7462427 + L1PA8 LINE L1 5264 5302 -844 1721 181 138 6 chr2 243225719 243226068 -7461786 + MSTD LTR MaLR 1 395 -1 385 242 13 0 chr2 243226117 243226266 -7461588 + (TG)n Simple_repeat Simple_repeat 2 152 0 399 222 76 42 chr2 243226284 243226428 -7461426 + L1ME4a LINE L1 5966 6114 -7 446 299 104 50 chr2 243226547 243226971 -7460883 + L1ME4a LINE L1 5406 5852 -269 1773 198 92 58 chr2 243227245 243227310 -7460544 - MLT1D LTR MaLR 0 654 593 1390 194 48 7 chr2 243227310 243227431 -7460423 + AluJo SINE Alu 2 117 -185 2011 139 0 0 chr2 243227431 243227734 -7460120 + AluSx SINE Alu 1 303 -9 1390 194 48 7 chr2 243227734 243227885 -7459969 + AluJo SINE Alu 117 285 -17 1773 198 92 58 chr2 243227885 243228372 -7459482 - MLT1D LTR MaLR -61 593 1 1019 171 45 0 chr2 243228493 243228669 -7459185 - MSTD LTR MaLR 0 396 213 265 263 40 72 chr2 243228773 243228925 -7458929 + L1ME4a LINE L1 5975 6121 0 281 313 78 58 chr2 243229329 243229816 -7458038 + L2 LINE L2 2742 3231 -41 594 222 0 46 chr2 243229929 243230107 -7457747 - MIR SINE MIR 0 262 95 410 290 159 0 chr2 243230325 243230501 -7457353 + LTR16C LTR ERVL 288 491 0 1393 257 86 35 chr2 243230653 243231132 -7456722 + MLT1D LTR MaLR 3 505 0 593 86 0 0 chr2 243232076 243232157 -7455697 + AluSg1 SINE Alu 2 82 -227 1498 101 0 0 chr2 243232240 243232449 -7455405 + AluSg/x SINE Alu 103 311 -1 242 331 47 83 chr2 243232451 243232705 -7455149 - L2 LINE L2 -12 3260 3016 25 0 0 0 chr2 243233961 243233986 -7453868 + AT_rich Low_complexity Low_complexity 1 25 0 272 271 0 52 chr2 243234155 243234251 -7453603 - MIR SINE MIR -1 261 171 1790 160 0 22 chr2 243235276 243235594 -7452260 - AluJo SINE Alu -1 311 1 192 242 212 55 chr2 243235596 243235618 -7452236 - MIR SINE MIR -16 246 229 1930 157 24 101 chr2 243235618 243236084 -7451770 - MSTB1 LTR MaLR 0 432 3 192 242 212 55 chr2 243236084 243236226 -7451628 - MIR SINE MIR -33 229 56 314 319 151 28 chr2 243236435 243236720 -7451134 - L1MDa LINE L1 -4023 2106 1787 1671 178 63 148 chr2 243236765 243237335 -7450519 - MLT1F1 LTR MaLR 0 567 41 384 310 79 71 chr2 243237402 243237496 -7450358 - L1MDa LINE L1 -4602 1527 1435 2184 105 0 0 chr2 243237496 243237791 -7450063 - AluSx SINE Alu -17 295 1 384 310 79 71 chr2 243237791 243238090 -7449764 - L1MDa LINE L1 -4694 1435 1229 468 206 188 19 chr2 243238094 243238254 -7449600 - MER53 DNA DNA 0 189 3 261 256 26 51 chr2 243238258 243238375 -7449479 - L1MDa LINE L1 -4892 1227 1114 1453 202 87 67 chr2 243238375 243238551 -7449303 - MLT1C LTR MaLR 0 467 296 1204 197 93 113 chr2 243238551 243239154 -7448700 + LTR49 LTR ERV1 5 595 0 1453 202 87 67 chr2 243239154 243239428 -7448426 - MLT1C LTR MaLR -171 296 8 1959 55 0 24 chr2 243239447 243239701 -7448153 + L1PA8 LINE L1 5920 6167 -5 2103 119 3 0 chr2 243240155 243240458 -7447396 + AluSx SINE Alu 1 304 -8 446 317 219 24 chr2 243240829 243241286 -7446568 - L1MDa LINE L1 -5524 595 50 1949 147 0 7 chr2 243241632 243241939 -7445915 - AluSc SINE Alu -4 305 1 239 258 15 15 chr2 243242049 243242115 -7445739 + MIR3 SINE MIR 120 185 -23 238 303 159 30 chr2 243242628 243242713 -7445141 - L2 LINE L2 -1 3312 3239 1838 118 61 10 chr2 243242713 243243009 -7444845 + AluSx SINE Alu 1 311 -1 238 303 159 30 chr2 243243009 243243055 -7444799 - L2 LINE L2 -74 3239 3164 222 35 0 0 chr2 243243209 243243224 -7444630 + (CA)n Simple_repeat Simple_repeat 2 16 -14 189 0 0 0 chr2 243243224 243243245 -7444609 + (TC)n Simple_repeat Simple_repeat 1 21 0 222 35 0 0 chr2 243243245 243243258 -7444596 + (CA)n Simple_repeat Simple_repeat 15 30 0 2060 117 7 0 chr2 243245624 243245922 -7441932 + AluSx SINE Alu 1 300 -12 324 214 107 39 chr2 243246406 243246584 -7441270 - MER33 DNA MER1_type -134 190 1 203 189 0 0 chr2 243246785 243246822 -7441032 + A-rich Low_complexity Low_complexity 1 37 0 183 300 83 0 chr2 243246835 243246895 -7440959 - L2 LINE L2 -2057 1257 1193 218 316 119 54 chr2 243248497 243248567 -7439287 + MIR3 SINE MIR 5 69 -139 826 199 5 78 chr2 243248567 243248758 -7439096 - MER45A DNA AcHobo 0 178 2 218 316 119 54 chr2 243248758 243248855 -7438999 + MIR3 SINE MIR 69 183 -25 218 368 11 0 chr2 243249411 243249506 -7438348 + L2 LINE L2 2944 3039 -233 267 303 77 39 chr2 243251130 243251285 -7436569 - L2 LINE L2 -782 2532 2372 282 233 35 0 chr2 243251517 243251603 -7436251 + CT-rich Low_complexity Low_complexity 1 89 0 1858 141 28 0 chr2 243251900 243252184 -7435670 + AluSx SINE Alu 1 292 -20 192 152 0 0 chr2 243252364 243252397 -7435457 + (CA)n Simple_repeat Simple_repeat 2 34 0 337 45 0 0 chr2 243252466 243252510 -7435344 + AluY SINE Alu 254 297 -4 694 218 140 6 chr2 243254481 243254660 -7433194 - MER20 DNA MER1_type -16 203 1 1566 113 4 13 chr2 243254799 243255037 -7432817 - AluY SINE Alu -13 298 63 214 333 68 27 chr2 243255039 243255186 -7432668 + L2 LINE L2 2715 2867 -447 1941 133 3 38 chr2 243255341 243255658 -7432196 - AluSx SINE Alu -5 307 2 763 176 24 0 chr2 243255775 243255900 -7431954 + FLAM_A SINE Alu 1 128 -5 27 49 0 0 chr2 243256239 243256280 -7431574 + AT_rich Low_complexity Low_complexity 1 41 0 1695 152 31 0 chr2 243257022 243257312 -7430542 + AluSx SINE Alu 5 303 -9 2114 101 3 0 chr2 243257563 243257859 -7429995 - AluSg SINE Alu -13 297 1 207 0 0 0 chr2 243258666 243258689 -7429165 + (TG)n Simple_repeat Simple_repeat 1 23 0 850 212 0 0 chr2 243259457 243259603 -7428251 + FRAM SINE Alu 1 146 -30 194 0 39 0 chr2 243259603 243259629 -7428225 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 510 284 92 66 chr2 243259704 243260007 -7427847 - HAL1 LINE L1 -2187 320 10 1597 133 139 27 chr2 243260051 243260388 -7427466 - THE1C LTR MaLR 0 375 1 329 316 78 24 chr2 243260406 243260612 -7427242 + Charlie2 DNA MER1_type 6 222 -2640 622 125 0 0 chr2 243260614 243260702 -7427152 - MLT1B LTR MaLR -215 175 88 1962 219 86 61 chr2 243260759 243261592 -7426262 + Charlie2 DNA MER1_type 1859 2712 -150 414 218 35 0 chr2 243261593 243261680 -7426174 - Tigger2 DNA MER2_type -10 2708 2619 1952 258 36 13 chr2 243261690 243262307 -7425547 + L1M4 LINE L1 3693 4323 -1823 751 224 133 26 chr2 243262354 243262486 -7425368 + MLT1C LTR MaLR 176 293 -174 3394 123 54 0 chr2 243262486 243262982 -7424872 + MER1A DNA MER1_type 1 523 -4 751 224 133 26 chr2 243262982 243263113 -7424741 + MLT1C LTR MaLR 293 467 0 2214 111 0 0 chr2 243263180 243263486 -7424368 - AluSx SINE Alu -1 311 6 528 114 0 0 chr2 243264352 243264431 -7423423 - Tigger2 DNA MER2_type -76 2642 2564 * 1129 152 28 33 chr2 243264430 243264641 -7423213 - Tigger2 DNA MER2_type -2508 210 1 267 154 92 0 chr2 243264657 243264722 -7423132 + Charlie2 DNA MER1_type 2728 2798 -64 1580 187 57 64 chr2 243265252 243265722 -7422132 - MLT1C LTR MaLR 0 467 1 2134 101 0 3 chr2 243265751 243266047 -7421807 + AluSc SINE Alu 1 295 -14 567 29 0 0 chr2 243266052 243266121 -7421733 + (GGAA)n Simple_repeat Simple_repeat 4 72 0 247 259 223 9 chr2 243266165 243266348 -7421506 + MIR SINE MIR 32 258 -4 2207 72 20 3 chr2 243267467 243267759 -7420095 + AluSc SINE Alu 1 297 -12 947 230 0 0 chr2 243268011 243268189 -7419665 - MER45A DNA AcHobo 0 178 1 413 288 53 15 chr2 243268681 243268813 -7419041 + MER5A DNA MER1_type 53 189 0 244 320 28 53 chr2 243269282 243269464 -7418390 + MIR SINE MIR 16 192 -70 585 251 24 18 chr2 243269616 243269783 -7418071 - L1ME LINE L1 -476 5645 5478 561 131 0 0 chr2 243269928 243270012 -7417842 - AluS SINE Alu 0 312 229 2378 107 0 3 chr2 243269930 243270239 -7417615 - AluSg SINE Alu -2 308 1 896 215 0 0 chr2 243270471 243270634 -7417220 - FRAM SINE Alu -3 163 1 1851 159 0 44 chr2 243271194 243271514 -7416340 - AluJo SINE Alu -2 310 5 2410 93 0 7 chr2 243271808 243272118 -7415736 - AluSg SINE Alu -2 308 1 3930 173 41 60 chr2 243272573 243273545 -7414309 + LTR13 LTR ERVK 1 954 0 189 154 15 62 chr2 243273779 243273844 -7414010 + (CATA)n Simple_repeat Simple_repeat 1 62 0 253 240 154 51 chr2 243273948 243274123 -7413731 - L1M4 LINE L1 -1874 4272 4080 282 188 0 31 chr2 243275232 243275296 -7412558 - MER103 DNA DNA -90 76 15 1122 118 0 0 chr2 243275394 243275555 -7412299 + AluSq SINE Alu 151 311 -2 197 248 162 19 chr2 243276528 243276633 -7411221 + MER5A DNA MER1_type 63 182 -7 208 250 0 0 chr2 243276728 243276768 -7411086 + polypyrimidine Low_complexity Low_complexity 4 43 0 185 216 0 0 chr2 243277420 243277457 -7410397 - L2 LINE L2 -12 3301 3265 400 316 73 28 chr2 243277480 243277727 -7410127 - MIR SINE MIR -1 261 4 22 0 0 0 chr2 243278035 243278057 -7409797 + AT_rich Low_complexity Low_complexity 1 22 0 696 45 0 0 chr2 243278729 243278817 -7409037 + (TTCCC)n Simple_repeat Simple_repeat 2 89 0 10676 150 21 13 chr2 243278917 243280933 -7406921 - L1P4 LINE L1 -685 5476 3451 317 264 16 8 chr2 243281257 243281378 -7406476 + (TG)n Simple_repeat Simple_repeat 2 123 0 1553 139 54 67 chr2 243281730 243281919 -7405935 + MER4E LTR ERV1 1 191 -575 1675 97 113 19 chr2 243281919 243282176 -7405678 + AluSg SINE Alu 6 286 -24 246 95 0 0 chr2 243282179 243282221 -7405633 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1553 139 54 67 chr2 243282221 243282490 -7405364 + MER4E LTR ERV1 193 766 0 2412 95 0 0 chr2 243282543 243282847 -7405007 + AluSx SINE Alu 1 304 -8 2190 100 0 10 chr2 243284322 243284639 -7403215 + AluSx SINE Alu 1 314 0 4066 117 39 7 chr2 243284655 243285269 -7402585 + MER41B LTR ERV1 2 635 0 1829 158 20 35 chr2 243285495 243285842 -7402012 + MER2 DNA MER2_type 1 342 -2 426 282 54 52 chr2 243286077 243286331 -7401523 - L1ME LINE L1 -303 5818 5592 2057 157 0 0 chr2 243287530 243287835 -7400019 - AluJb SINE Alu -7 305 1 500 221 54 107 chr2 243287872 243288152 -7399702 - MLT1I LTR MaLR -40 369 105 333 237 9 130 chr2 243289540 243289755 -7398099 - L1ME4a LINE L1 -276 5845 5657 474 182 97 56 chr2 243289972 243290060 -7397794 - MER34 LTR ERV1 -8 577 494 1950 120 62 0 chr2 243290060 243290334 -7397520 + AluSx SINE Alu 1 291 -21 474 182 97 56 chr2 243290334 243290410 -7397444 - MER34 LTR ERV1 -91 494 370 352 253 159 34 chr2 243290519 243290754 -7397100 - MER34 LTR ERV1 -195 512 308 1984 127 0 23 chr2 243290754 243291053 -7396801 - AluJo SINE Alu -20 292 1 352 253 159 34 chr2 243291053 243291127 -7396727 - MER34 LTR ERV1 -399 308 1 180 0 0 0 chr2 243291463 243291483 -7396371 + (A)n Simple_repeat Simple_repeat 1 20 0 2179 132 0 7 chr2 243291543 243291853 -7396001 + AluSx SINE Alu 1 308 -4 1066 169 0 0 chr2 243292730 243292890 -7394964 - FRAM SINE Alu -16 160 1 537 122 102 31 chr2 243292919 243293017 -7394837 + MER53 DNA DNA 1 105 -84 744 191 153 24 chr2 243293257 243293564 -7394290 - LTR54B LTR ERV1 -53 445 75 476 255 35 0 chr2 243294068 243294213 -7393641 + MIR SINE MIR 43 192 -70 207 194 0 0 chr2 243294486 243294522 -7393332 + (CA)n Simple_repeat Simple_repeat 1 36 0 1659 211 31 6 chr2 243295991 243296347 -7391507 - MLT1A1 LTR MaLR 0 365 1 424 75 194 0 chr2 243296786 243296853 -7391001 - MADE1 DNA Mariner 0 80 1 2112 104 7 7 chr2 243296886 243297174 -7390680 - AluSx SINE Alu -24 288 1 655 198 24 8 chr2 243299073 243299199 -7388655 + FLAM_A SINE Alu 1 128 -5 27 49 0 0 chr2 243299538 243299579 -7388275 + AT_rich Low_complexity Low_complexity 1 41 0 307 314 81 58 chr2 243299920 243300535 -7387319 - L1MDa LINE L1 -3242 3298 2670 2030 127 10 13 chr2 243300551 243300851 -7387003 + AluSx SINE Alu 1 299 -13 189 147 0 0 chr2 243302156 243302190 -7385664 + (A)n Simple_repeat Simple_repeat 1 34 0 4630 153 67 13 chr2 243303410 243303608 -7384246 - L1MDa LINE L1 -3939 2601 2415 927 151 34 11 chr2 243303608 243303787 -7384067 - L1MA6 LINE L1 -2 6298 6116 4630 153 67 13 chr2 243303787 243304552 -7383302 - L1MDa LINE L1 -4125 2415 1588 227 343 98 34 chr2 243304820 243305041 -7382813 + L2 LINE L2 1853 2058 -1256 2520 84 0 0 chr2 243305041 243305350 -7382504 - AluSg SINE Alu -1 309 1 227 343 98 34 chr2 243305350 243305566 -7382288 + L2 LINE L2 2058 2318 -996 269 204 45 11 chr2 243306265 243306353 -7381501 - L1ME4a LINE L1 -11 6110 6020 224 262 0 24 chr2 243306531 243306615 -7381239 + (TTATA)n Simple_repeat Simple_repeat 3 84 0 2147 122 0 3 chr2 243306815 243307109 -7380745 - AluSq SINE Alu -20 293 1 641 293 84 13 chr2 243308391 243308630 -7379224 - MIR SINE MIR 0 262 7 2105 109 7 3 chr2 243309687 243309972 -7377882 + AluSg SINE Alu 1 286 -24 2332 33 4 0 chr2 243309972 243310247 -7377607 + L1PA4 LINE L1 5820 6095 -60 1525 201 54 41 chr2 243311005 243311374 -7376480 + MLT1A2 LTR MaLR 1 374 0 199 298 114 9 chr2 243313583 243313697 -7374157 - L3 LINE CR1 -3 1574 1449 2237 116 0 3 chr2 243314256 243314557 -7373297 - AluSq SINE Alu -13 300 1 677 259 5 49 chr2 243315521 243315641 -7372213 - MER45A DNA AcHobo -1404 177 66 1580 218 18 75 chr2 243315641 243315888 -7371966 - MLT1C LTR MaLR 0 467 260 1967 119 0 4 chr2 243315888 243316157 -7371697 - AluSq SINE Alu -45 268 1 1580 218 18 75 chr2 243316157 243316404 -7371450 - MLT1C LTR MaLR -207 260 1 677 259 5 49 chr2 243316404 243316468 -7371386 - MER45A DNA AcHobo -1515 66 1 734 188 0 8 chr2 243316951 243317084 -7370770 - MLT1D LTR MaLR -17 488 357 1546 198 108 19 chr2 243317508 243317548 -7370306 + MLT1D LTR MaLR 1 36 -469 2398 149 49 10 chr2 243317548 243317958 -7369896 - MSTB LTR MaLR 0 426 1 1546 198 108 19 chr2 243317958 243318367 -7369487 + MLT1D LTR MaLR 36 505 0 2426 61 0 7 chr2 243319602 243319895 -7367959 - AluY SINE Alu -20 291 1 2197 112 3 3 chr2 243320465 243320760 -7367094 + AluSx SINE Alu 1 295 -17 954 214 134 35 chr2 243320887 243321200 -7366654 - MER2 DNA MER2_type 0 344 1 1036 213 83 71 chr2 243321335 243321754 -7366100 + MLT1C LTR MaLR 18 451 -16 1364 216 10 30 chr2 243322000 243322305 -7365549 + AluJb SINE Alu 1 299 -3 297 330 54 25 chr2 243322488 243322655 -7365199 - MLT1J2 LTR MaLR -17 426 264 2413 105 0 6 chr2 243322657 243322971 -7364883 - AluSx SINE Alu 0 312 1 430 266 147 0 chr2 243323638 243323781 -7364073 + MER5A DNA MER1_type 23 186 -3 1569 106 0 0 chr2 243324366 243324574 -7363280 + AluSg/x SINE Alu 95 302 -10 2116 138 6 3 chr2 243325025 243325337 -7362517 - AluSq SINE Alu 0 313 1 2674 43 0 0 chr2 243325664 243325965 -7361889 - AluY SINE Alu -10 301 1 1558 108 0 52 chr2 243326092 243326323 -7361531 + AluSp SINE Alu 1 219 -94 481 133 27 0 chr2 243326452 243326527 -7361327 + AluS SINE Alu 223 299 -10 2444 97 3 0 chr2 243326532 243326841 -7361013 + AluSp SINE Alu 2 311 -2 2175 127 32 24 chr2 243327014 243327384 -7360470 + THE1C LTR MaLR 1 373 -2 782 214 60 11 chr2 243327913 243328095 -7359759 - MLT1D LTR MaLR -139 366 176 278 152 0 0 chr2 243328283 243328329 -7359525 - FLAM_A SINE Alu 0 133 88 1550 135 0 0 chr2 243328329 243328544 -7359310 - AluY SINE Alu -96 215 1 219 229 0 0 chr2 243328939 243328987 -7358867 + (CA)n Simple_repeat Simple_repeat 1 48 0 325 304 128 41 chr2 243329366 243329781 -7358073 - L1ME4a LINE L1 -185 5936 5486 671 301 102 8 chr2 243330786 243331042 -7356812 - LTR16B LTR ERVL 0 464 185 2164 129 0 0 chr2 243331088 243331390 -7356464 + AluSx SINE Alu 1 302 -10 273 143 0 0 chr2 243331570 243331619 -7356235 - AluSc SINE Alu 0 299 251 282 293 57 8 chr2 243332072 243332209 -7355645 - L1PA8A LINE L1 -307 5814 5672 2158 112 3 17 chr2 243332263 243332558 -7355296 - AluSg SINE Alu -19 291 1 683 110 10 0 chr2 243332558 243332658 -7355196 - MSTD LTR MaLR -295 101 1 297 273 83 62 chr2 243332884 243333066 -7354788 + L1M4 LINE L1 4357 4534 -1612 2169 107 21 3 chr2 243333066 243333356 -7354498 + AluSq SINE Alu 1 295 -18 297 273 83 62 chr2 243333356 243333473 -7354381 + L1M4 LINE L1 4534 4666 -1480 2353 109 3 0 chr2 243333473 243333785 -7354069 + AluSp SINE Alu 1 313 0 297 273 83 62 chr2 243333785 243333821 -7354033 + L1M4 LINE L1 4666 4700 -1446 1874 153 29 3 chr2 243333869 243334177 -7353677 - THE1B LTR MaLR -48 316 1 248 156 0 0 chr2 243334774 243334819 -7353035 + Alu SINE Alu 258 302 0 190 255 0 0 chr2 243335338 243335389 -7352465 - L2 LINE L2 0 3272 3222 2104 118 0 13 chr2 243335991 243336297 -7351557 + AluSg SINE Alu 1 302 -8 1598 105 0 10 chr2 243336669 243336878 -7350976 - AluSq SINE Alu -106 207 1 681 251 97 32 chr2 243338233 243338512 -7349342 + MLT1J1 LTR MaLR 12 308 -138 2109 125 0 16 chr2 243338722 243339026 -7348828 - AluSq SINE Alu -14 299 1 258 219 0 0 chr2 243341253 243341317 -7346537 + GA-rich Low_complexity Low_complexity 1 64 0 2036 109 0 4 chr2 243341349 243341625 -7346229 + AluSq SINE Alu 39 313 0 1873 177 0 0 chr2 243341917 243342217 -7345637 - AluSx SINE Alu -12 300 1 186 300 0 0 chr2 243342979 243343119 -7344735 + (TG)n Simple_repeat Simple_repeat 2 141 0 221 0 35 0 chr2 243343702 243343731 -7344123 + (TG)n Simple_repeat Simple_repeat 2 31 0 1459 198 23 45 chr2 243344189 243344404 -7343450 + MLT1E2 LTR MaLR 269 474 -152 2319 78 3 47 chr2 243344404 243344723 -7343131 - AluY SINE Alu -6 305 1 1459 198 23 45 chr2 243344723 243344860 -7342994 + MLT1E2 LTR MaLR 474 613 -13 282 305 76 0 chr2 243345002 243345107 -7342747 - L1ME LINE L1 -612 5509 5397 2035 116 7 14 chr2 243345259 243345544 -7342310 - AluSq SINE Alu -14 299 17 668 120 226 0 chr2 243345967 243346100 -7341754 + L1MD2 LINE L1 6194 6356 -3 314 303 67 22 chr2 243346935 243347113 -7340741 + L2 LINE L2 2588 2773 -541 3847 182 103 21 chr2 243347338 243348136 -7339718 + MER21B LTR ERV1 1 863 0 278 287 57 25 chr2 243348820 243348942 -7338912 - MIR3 SINE MIR -35 173 48 2380 108 0 0 chr2 243350421 243350728 -7337126 + AluSx SINE Alu 1 307 -5 501 348 90 0 chr2 243350955 243351265 -7336589 - L1ME4a LINE L1 -275 5846 5509 1981 140 0 23 chr2 243351308 243351608 -7336246 - AluSq SINE Alu -18 295 3 2098 131 3 19 chr2 243352506 243352643 -7335211 + AluSx SINE Alu 1 139 -173 2244 102 0 7 chr2 243352643 243352947 -7334907 + AluSg SINE Alu 3 304 -6 2098 131 3 19 chr2 243352947 243353123 -7334731 + AluSx SINE Alu 139 309 -3 342 232 166 33 chr2 243353630 243353781 -7334073 + MLT1K LTR MaLR 296 466 -122 313 245 14 3 chr2 243354067 243354158 -7333696 - MLT1F LTR MaLR -54 501 400 237 276 0 66 chr2 243354260 243354336 -7333518 - MLT1F LTR MaLR -304 286 216 664 111 0 0 chr2 243355227 243355317 -7332537 - AluSg SINE Alu -219 91 2 2023 207 39 13 chr2 243355317 243355781 -7332073 - L1MD1 LINE L1 -121 6121 5646 2516 136 46 5 chr2 243356242 243356653 -7331201 + MSTA LTR MaLR 1 428 0 28 79 0 0 chr2 243356711 243356774 -7331080 + AT_rich Low_complexity Low_complexity 1 63 0 1987 164 59 3 chr2 243358159 243358548 -7329306 - L1MC3 LINE L1 -21 7764 7354 439 335 119 34 chr2 243359501 243360198 -7327656 + L2 LINE L2 2485 3308 -5 2540 203 89 65 chr2 243360343 243361354 -7326500 + L1ME2 LINE L1 5125 6154 -10 1878 128 68 46 chr2 243361861 243362228 -7325626 + THE1C LTR MaLR 1 375 0 2053 153 13 0 chr2 243362335 243362643 -7325211 - AluSx SINE Alu 0 312 1 1723 194 67 60 chr2 243362778 243363242 -7324612 + MLT1C LTR MaLR 1 467 0 2330 92 0 0 chr2 243364256 243364548 -7323306 + AluSx SINE Alu 5 296 -16 276 234 39 0 chr2 243364608 243364685 -7323169 - MIR SINE MIR -90 118 39 1105 230 128 21 chr2 243365477 243365912 -7321942 + L1MA9 LINE L1 656 1043 -5338 342 45 0 0 chr2 243365912 243365956 -7321898 + (CA)n Simple_repeat Simple_repeat 1 44 0 1105 230 128 21 chr2 243365956 243366060 -7321794 + L1MA9 LINE L1 1043 6356 -25 31 26 0 0 chr2 243366060 243366098 -7321756 + AT_rich Low_complexity Low_complexity 1 38 0 731 306 89 8 chr2 243366153 243366732 -7321122 + L1MEd LINE L1 996 1667 -4729 22 0 0 0 chr2 243366882 243366904 -7320950 + AT_rich Low_complexity Low_complexity 1 22 0 2072 143 29 38 chr2 243367065 243367501 -7320353 + MER51B LTR ERV1 1 375 -2 877 293 122 16 chr2 243367567 243368285 -7319569 + L1MEd LINE L1 2143 2890 -3325 216 97 0 0 chr2 243368312 243368343 -7319511 + (CA)n Simple_repeat Simple_repeat 2 32 0 253 264 9 57 chr2 243368465 243368571 -7319283 + MER103 DNA DNA 61 161 -5 21 0 0 0 chr2 243368890 243368911 -7318943 + AT_rich Low_complexity Low_complexity 1 21 0 1620 187 156 67 chr2 243369436 243369576 -7318278 + MLT1F1 LTR MaLR 3 129 -438 2211 110 0 0 chr2 243369576 243369898 -7317956 - AluSx SINE Alu 0 312 1 1620 187 156 67 chr2 243369898 243370276 -7317578 + MLT1F1 LTR MaLR 129 567 0 4440 267 91 31 chr2 243370480 243370550 -7317304 + L1MC4a LINE L1 5763 5827 -1981 2025 106 0 38 chr2 243370550 243370686 -7317168 + AluSq SINE Alu 1 141 -172 2447 78 0 10 chr2 243370686 243370993 -7316861 + AluY SINE Alu 1 304 -7 2025 106 0 38 chr2 243370993 243371148 -7316706 + AluSq SINE Alu 141 281 -32 210 37 0 0 chr2 243371148 243371175 -7316679 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 4440 267 91 31 chr2 243371175 243372547 -7315307 + L1MC4a LINE L1 5826 7293 -515 438 53 53 79 chr2 243372601 243372677 -7315177 + L1MC4 LINE L1 7969 8042 0 2168 108 0 7 chr2 243373291 243373607 -7314247 + AluY SINE Alu 1 314 0 2627 135 33 19 chr2 243373807 243374229 -7313625 - MSTC LTR MaLR 0 428 1 248 284 61 76 chr2 243374421 243374618 -7313236 + HAL1b LINE L1 336 529 -819 462 256 31 8 chr2 243374760 243374889 -7312965 + L2 LINE L2 3182 3313 0 242 300 0 0 chr2 243374902 243374952 -7312902 - MIR SINE MIR -181 81 32 215 79 26 0 chr2 243375890 243375928 -7311926 + (TTTTG)n Simple_repeat Simple_repeat 5 43 0 2285 119 0 0 chr2 243376118 243376429 -7311425 + AluSx SINE Alu 1 311 -1 906 87 0 0 chr2 243376929 243377044 -7310810 + AluSq/x SINE Alu 28 142 -171 915 104 0 8 chr2 243377136 243377261 -7310593 - THE1B LTR MaLR 0 364 241 26 64 0 0 chr2 243377338 243377385 -7310469 + AT_rich Low_complexity Low_complexity 1 47 0 369 271 125 83 chr2 243377578 243377713 -7310141 + L1M4 LINE L1 3903 4031 -2115 2403 102 3 0 chr2 243377713 243378018 -7309836 + AluSp SINE Alu 1 306 -7 369 271 125 83 chr2 243378018 243378291 -7309563 + L1M4 LINE L1 4031 4328 -1818 245 298 21 21 chr2 243379005 243379099 -7308755 - MER112 DNA MER1_type -78 182 89 452 273 14 0 chr2 243379249 243379388 -7308466 + L2 LINE L2 2432 2572 -742 2135 109 59 45 chr2 243379409 243379766 -7308088 + THE1B LTR MaLR 3 364 0 1058 213 80 117 chr2 243381574 243382085 -7305769 - MLT1H LTR MaLR 0 549 58 789 184 0 0 chr2 243382185 243382310 -7305544 + FLAM_A SINE Alu 1 125 -8 748 175 117 12 chr2 243383220 243383391 -7304463 + MER5A DNA MER1_type 1 189 0 189 94 0 0 chr2 243384151 243384183 -7303671 + (T)n Simple_repeat Simple_repeat 1 32 0 1582 99 0 0 chr2 243384675 243384877 -7302977 + AluSq SINE Alu 100 301 -12 183 80 0 0 chr2 243384974 243384999 -7302855 + (CA)n Simple_repeat Simple_repeat 2 26 0 2429 74 7 0 chr2 243385208 243385504 -7302350 + AluY SINE Alu 1 298 -13 680 184 79 0 chr2 243385870 243386022 -7301832 - L1MD1 LINE L1 0 6242 6079 2631 148 18 98 chr2 243386652 243387212 -7300642 + LTR12 LTR ERV1 67 581 -133 1840 116 112 7 chr2 243387212 243387515 -7300339 + MSTA LTR MaLR 94 428 0 365 224 14 65 chr2 243387614 243387739 -7300115 + MLT1J LTR MaLR 287 487 -128 311 262 74 0 chr2 243390845 243390967 -7296887 + L2 LINE L2 3160 3290 -23 2262 109 0 0 chr2 243391780 243392083 -7295771 + AluSg SINE Alu 1 303 -7 533 261 7 26 chr2 243392099 243392252 -7295602 - MIR SINE MIR -111 151 2 816 159 31 0 chr2 243392318 243392481 -7295373 - MER53 DNA DNA -17 172 5 188 67 33 0 chr2 243392689 243392719 -7295135 + (CA)n Simple_repeat Simple_repeat 1 31 0 1523 167 3 60 chr2 243392876 243393193 -7294661 - AluJo SINE Alu -10 302 4 210 37 0 0 chr2 243394852 243394879 -7292975 + (TG)n Simple_repeat Simple_repeat 1 27 0 365 289 64 17 chr2 243395418 243395591 -7292263 + MIR SINE MIR 26 206 -56 352 233 121 52 chr2 243395723 243395839 -7292015 - L2 LINE L2 -6 3307 3184 2264 141 11 27 chr2 243395951 243396320 -7291534 + THE1B LTR MaLR 2 364 0 180 0 0 0 chr2 243396322 243396342 -7291512 + (CCCTAA)n Simple_repeat Simple_repeat 1 20 0 598 193 29 0 chr2 243397418 243397589 -7290265 + (CCCCAG)n Simple_repeat Simple_repeat 4 179 0 807 135 35 0 chr2 243397604 243397774 -7290080 + (CCCCAG)n Simple_repeat Simple_repeat 4 179 0 291 37 0 112 chr2 243397757 243397864 -7289990 + (CACCT)n Simple_repeat Simple_repeat 3 97 0 * 2331 108 0 0 chr2 243398667 243398964 -7288890 + AluSg SINE Alu 2 298 -12 334 267 53 53 chr2 243399788 243399919 -7287935 + MER94 DNA DNA 2 132 -2 2424 152 28 30 chr2 243400440 243400867 -7286987 + MSTB LTR MaLR 1 426 0 304 239 58 58 chr2 243401085 243401240 -7286614 + L1 LINE L1 3115 3269 -2877 876 89 0 0 chr2 243401365 243401488 -7286366 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 2058 113 3 14 chr2 243401498 243401782 -7286072 - AluSp SINE Alu -30 283 3 193 246 53 0 chr2 243401786 243401843 -7286011 + L2 LINE L2 3230 3289 -24 1667 141 90 34 chr2 243402490 243402845 -7285009 - THE1C LTR MaLR 0 375 1 3724 178 75 7 chr2 243402939 243403674 -7284180 + LTR48 LTR ERV1 1 785 -2 2467 84 0 0 chr2 243403913 243404221 -7283633 + AluY SINE Alu 1 308 -3 25 0 0 0 chr2 243404259 243404284 -7283570 + AT_rich Low_complexity Low_complexity 1 25 0 806 251 101 9 chr2 243404544 243404771 -7283083 + MER21B LTR ERV1 1 248 -615 1819 192 20 14 chr2 243404801 243405200 -7282654 + MER21B LTR ERV1 422 754 -109 2026 110 0 4 chr2 243405744 243406017 -7281837 + AluSc SINE Alu 1 272 -37 2562 66 0 0 chr2 243406471 243406775 -7281079 + AluY SINE Alu 1 304 -7 744 133 77 21 chr2 243407017 243407160 -7280694 + MLT1D LTR MaLR 355 505 0 258 373 127 0 chr2 243407437 243407563 -7280291 + L2 LINE L2 3127 3268 -4 2014 75 68 14 chr2 243408054 243408335 -7279519 - AluSq SINE Alu -13 300 5 1073 104 0 0 chr2 243409472 243409606 -7278248 - AluSg SINE Alu -176 134 1 195 229 0 0 chr2 243409700 243409735 -7278119 - MIR SINE MIR -147 115 81 329 286 137 6 chr2 243409754 243409808 -7278046 + L2 LINE L2 3118 3164 -149 189 0 0 0 chr2 243409808 243409829 -7278025 + (TC)n Simple_repeat Simple_repeat 2 22 0 329 286 137 6 chr2 243409829 243409935 -7277919 + L2 LINE L2 3164 3299 -14 309 293 47 24 chr2 243409985 243410197 -7277657 - L2 LINE L2 -220 3052 2836 1938 156 143 11 chr2 243410401 243410779 -7277075 + MSTA LTR MaLR 1 428 0 1372 270 43 54 chr2 243410791 243412034 -7275820 + L1ME3A LINE L1 4698 5888 -274 2174 143 87 50 chr2 243412043 243412631 -7275223 - MER4A LTR ERV1 0 465 1 608 226 91 53 chr2 243412631 243412896 -7274958 + L1ME3A LINE L1 5878 6152 -18 747 162 39 13 chr2 243412896 243413050 -7274804 + MER65A LTR ERV1 1 158 -287 195 129 0 0 chr2 243413108 243413139 -7274715 + (TA)n Simple_repeat Simple_repeat 1 31 0 354 246 76 68 chr2 243413164 243413428 -7274426 + MER65A LTR ERV1 180 445 0 632 200 15 7 chr2 243413459 243413594 -7274260 + L1MD2 LINE L1 6062 6197 -162 2664 154 60 36 chr2 243413594 243413684 -7274170 - MER34C LTR ERV1 -13 572 486 5122 90 13 10 chr2 243413684 243414373 -7273481 + LTR8 LTR ERV1 1 691 0 2664 154 60 36 chr2 243414373 243414802 -7273052 - MER34C LTR ERV1 -99 486 41 511 138 138 76 chr2 243414805 243414857 -7272997 + L1MD2 LINE L1 6194 6241 -118 2204 119 3 13 chr2 243414857 243415167 -7272687 + AluSx SINE Alu 2 308 -4 511 138 138 76 chr2 243415167 243415259 -7272595 + L1MD2 LINE L1 6241 6347 -12 378 56 0 0 chr2 243616014 243616068 -7071786 + AluSc SINE Alu 244 297 -2 685 191 0 7 chr2 243616700 243616847 -7071007 - LTR37A LTR ERV1 0 426 281 2032 134 13 0 chr2 243616889 243617187 -7070667 + AluSx SINE Alu 1 302 -10 359 220 28 28 chr2 243617344 243617453 -7070401 + AluSc SINE Alu 191 299 0 2278 114 0 0 chr2 243617809 243618108 -7069746 + AluY SINE Alu 1 299 -12 1873 169 3 7 chr2 243618133 243618423 -7069431 + AluJb SINE Alu 1 289 -23 374 262 120 44 chr2 243618595 243618778 -7069076 + L1M4 LINE L1 2151 2347 -3799 277 286 32 45 chr2 243618847 243619001 -7068853 + L2 LINE L2 2163 2314 -1000 378 243 27 9 chr2 243619016 243619127 -7068727 + MER81 DNA DNA 2 114 0 212 272 130 11 chr2 243619230 243619322 -7068532 + L2 LINE L2 3168 3270 -2 2331 98 7 0 chr2 243620266 243620563 -7067291 + AluSx SINE Alu 2 300 -12 496 234 48 36 chr2 243622468 243622635 -7065219 - MER5B DNA MER1_type -3 175 7 456 232 178 65 chr2 243622810 243622899 -7064955 - MER63A DNA MER1_type -1479 209 131 1963 128 27 14 chr2 243622899 243623195 -7064659 + AluSx SINE Alu 1 300 -12 456 232 178 65 chr2 243623195 243623290 -7064564 - MER63A DNA MER1_type -1557 131 4 1862 140 7 18 chr2 243623374 243623660 -7064194 + AluJo SINE Alu 16 298 -14 344 278 236 11 chr2 243624264 243624455 -7063399 + MIR SINE MIR 26 259 -3 1058 279 61 13 chr2 243627896 243628290 -7059564 + MLT1C LTR MaLR 53 465 -2 2623 58 0 7 chr2 243629808 243630118 -7057736 + AluY SINE Alu 1 308 -3 266 270 0 45 chr2 243631472 243631561 -7056293 - MER58A DNA MER1_type 0 113 29 1826 153 0 30 chr2 243631587 243631882 -7055972 + AluJo SINE Alu 3 288 -24 2601 141 107 14 chr2 243632728 243633212 -7054642 + MER72 LTR ERV1 194 722 0 424 72 29 0 chr2 243633452 243633521 -7054333 + (TTCA)n Simple_repeat Simple_repeat 4 74 0 1860 175 13 22 chr2 243633624 243633939 -7053915 - AluJo SINE Alu 0 312 1 204 257 136 36 chr2 243634004 243634144 -7053710 - L2 LINE L2 -260 3053 2900 2025 156 0 0 chr2 243640077 243640396 -7047458 - AluSx SINE Alu 0 312 1 237 65 0 0 chr2 243640835 243640866 -7046988 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 549 227 82 65 chr2 243641471 243641913 -7045941 + MER39 LTR ERV1 1 527 -38 599 26 13 0 chr2 243641932 243642009 -7045845 + (TA)n Simple_repeat Simple_repeat 2 79 0 335 224 30 59 chr2 243642124 243642255 -7045599 + L1MC4 LINE L1 1952 6983 -1339 183 80 0 0 chr2 243642256 243642281 -7045573 + (TG)n Simple_repeat Simple_repeat 2 26 0 472 222 111 0 chr2 243642304 243642421 -7045433 + L2 LINE L2 3182 3311 -2 2181 52 0 4 chr2 243643719 243643969 -7043885 - AluSg SINE Alu -61 249 1 632 264 46 14 chr2 243644746 243644962 -7042892 + MER58A DNA MER1_type 1 223 -1 1025 267 81 12 chr2 243646957 243647290 -7040564 + MLT1A2 LTR MaLR 1 356 -18 248 284 26 52 chr2 243649997 243650113 -7037741 - MIR SINE MIR -79 183 71 583 291 163 19 chr2 243651021 243651693 -7036161 + L2 LINE L2 2265 3030 -283 2075 124 0 0 chr2 243652883 243653321 -7034533 - AluSx SINE Alu 0 438 1 1864 214 133 95 chr2 243653719 243654364 -7033490 - MER21B LTR ERV1 -57 806 126 2245 124 0 0 chr2 243654364 243654662 -7033192 - AluSx SINE Alu -13 299 2 1864 214 133 95 chr2 243654662 243654793 -7033061 - MER21B LTR ERV1 -737 126 1 60 15 0 0 chr2 243654871 243654938 -7032916 + AT_rich Low_complexity Low_complexity 1 67 0 2178 107 3 0 chr2 243654957 243655246 -7032608 - AluSc SINE Alu -19 290 1 633 208 28 14 chr2 243656506 243656650 -7031204 + MER65B LTR ERV1 1 146 -385 302 286 65 55 chr2 243656806 243657005 -7030849 + MER65A LTR ERV1 245 445 0 460 283 80 40 chr2 243657681 243657907 -7029947 + MIR SINE MIR 17 251 -11 661 123 88 9 chr2 243658357 243658471 -7029383 - MLT1A1 LTR MaLR 0 365 243 1310 218 39 66 chr2 243659025 243659286 -7028568 - MLT1A1 LTR MaLR -13 352 102 2625 97 6 0 chr2 243659286 243659648 -7028206 + THE1B LTR MaLR 1 364 0 1310 218 39 66 chr2 243659648 243659748 -7028106 - MLT1A1 LTR MaLR -263 102 1 282 304 0 0 chr2 243659762 243659841 -7028013 + (TA)n Simple_repeat Simple_repeat 2 80 0 22 70 0 0 chr2 243659912 243659955 -7027899 + AT_rich Low_complexity Low_complexity 1 43 0 270 333 31 0 chr2 243660182 243660404 -7027450 - L1M4 LINE L1 -1300 4846 4618 245 118 66 40 chr2 243660404 243660480 -7027374 + (TTTA)n Simple_repeat Simple_repeat 2 79 0 7581 13 0 0 chr2 243660492 243661808 -7026046 - L1PA2 LINE L1 0 6155 4842 213 327 0 0 chr2 243661908 243661963 -7025891 + MIR SINE MIR 116 170 -92 2315 104 7 0 chr2 243663059 243663366 -7024488 - AluSx SINE Alu -3 309 1 1578 160 64 11 chr2 243663515 243663796 -7024058 + AluJo SINE Alu 1 296 -16 1526 136 16 8 chr2 243664710 243664967 -7022887 - AluJb SINE Alu -13 299 41 1949 105 3 7 chr2 243665045 243665330 -7022524 + AluSx SINE Alu 29 312 0 2347 82 3 0 chr2 243665335 243665641 -7022213 + AluSc SINE Alu 1 307 -2 3912 178 63 1 chr2 243665690 243666422 -7021432 + L1MB2 LINE L1 5388 6164 -7 405 287 84 21 chr2 243666993 243667136 -7020718 + MER5B DNA MER1_type 7 158 -20 485 193 0 11 chr2 243667310 243667491 -7020363 + (TG)n Simple_repeat Simple_repeat 1 179 0 192 200 0 0 chr2 243667502 243667557 -7020297 + (TG)n Simple_repeat Simple_repeat 1 55 0 201 143 0 48 chr2 243668457 243668499 -7019355 - L2 LINE L2 -1303 2011 1972 385 261 182 12 chr2 243670258 243670423 -7017431 + MIR SINE MIR 41 233 -29 315 282 154 0 chr2 243670880 243671036 -7016818 + MIR SINE MIR 75 254 -8 1968 100 36 0 chr2 243671072 243671351 -7016503 - AluSq SINE Alu -24 289 1 194 309 15 0 chr2 243672963 243673031 -7014823 + L2 LINE L2 3141 3209 -63 189 254 0 18 chr2 243673848 243673903 -7013951 - L3 LINE CR1 -584 993 940 244 194 0 32 chr2 243674184 243674246 -7013608 + L1ME4a LINE L1 5677 5736 -385 1440 130 57 83 chr2 243674399 243674700 -7013154 + AluSq SINE Alu 2 294 -19 262 196 0 0 chr2 243674707 243674753 -7013101 - L2 LINE L2 -4 3309 3264 317 239 145 34 chr2 243674813 243674930 -7012924 + L1ME4a LINE L1 5968 6097 -24 22 0 0 0 chr2 243674977 243674999 -7012855 + AT_rich Low_complexity Low_complexity 1 22 0 1912 135 0 3 chr2 243675010 243675307 -7012547 + AluSx SINE Alu 1 296 -16 210 118 0 0 chr2 243675539 243675573 -7012281 + (CCCCCA)n Simple_repeat Simple_repeat 5 38 0 2160 117 0 0 chr2 243675876 243676184 -7011670 + AluSx SINE Alu 1 308 -4 189 284 81 0 chr2 243676236 243676310 -7011544 - MIR SINE MIR -63 199 120 274 186 0 0 chr2 243677336 243677379 -7010475 + 5S rRNA rRNA 1 43 -78 209 310 14 0 chr2 243678165 243678236 -7009618 + CT-rich Low_complexity Low_complexity 3 74 0 202 229 66 0 chr2 243679645 243679706 -7008148 - MIR3 SINE MIR -27 181 117 433 256 188 34 chr2 243680483 243680749 -7007105 + L1ME4a LINE L1 5803 6109 -12 1865 131 3 3 chr2 243680788 243681070 -7006784 - AluSx SINE Alu -30 282 1 292 271 42 0 chr2 243681487 243681583 -7006271 - L1ME LINE L1 -393 5728 5629 1610 95 121 11 chr2 243681802 243682066 -7005788 - AluSg SINE Alu -17 293 1 1944 125 13 30 chr2 243682701 243683006 -7004848 - AluSx SINE Alu -12 300 1 755 261 31 10 chr2 243683199 243683394 -7004460 - MER58A DNA MER1_type 0 224 26 192 393 49 16 chr2 243683432 243683554 -7004300 + MIR SINE MIR 33 158 -104 1849 155 3 7 chr2 243683820 243684124 -7003730 - AluSx SINE Alu -9 303 1 207 0 0 0 chr2 243684442 243684465 -7003389 + (T)n Simple_repeat Simple_repeat 1 23 0 198 276 52 0 chr2 243684492 243684550 -7003304 + MIR3 SINE MIR 112 172 -36 2209 99 3 0 chr2 243684603 243684905 -7002949 + AluSq SINE Alu 1 303 -10 406 299 29 23 chr2 243685243 243685417 -7002437 + L2 LINE L2 2886 3060 -253 181 339 31 0 chr2 243685815 243685880 -7001974 - L2 LINE L2 0 3272 3206 354 311 79 75 chr2 243686798 243686871 -7000983 + L1ME4a LINE L1 5759 5830 -291 2011 93 4 0 chr2 243686871 243687141 -7000713 - AluSg1 SINE Alu -8 301 31 354 311 79 75 chr2 243687141 243687385 -7000469 + L1ME4a LINE L1 5830 6077 -44 231 189 0 0 chr2 243687473 243687526 -7000328 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 2026 100 0 11 chr2 243687540 243687820 -7000034 + AluSc SINE Alu 11 287 -22 326 246 0 0 chr2 243688197 243688266 -6999588 - MER20 DNA MER1_type -125 94 26 184 277 77 0 chr2 243688823 243688888 -6998966 + MIR SINE MIR 64 133 -129 1293 216 109 24 chr2 243689448 243689861 -6997993 + MLT1C LTR MaLR 18 465 -2 4465 149 9 1 chr2 243690452 243691149 -6996705 + Tigger2 DNA MER2_type 43 744 -1974 1618 130 4 15 chr2 243691215 243691476 -6996378 + Tigger2 DNA MER2_type 2451 2708 -10 303 208 115 0 chr2 243691499 243691595 -6996259 - LTR37A LTR ERV1 -233 193 87 2170 120 0 0 chr2 243691953 243692261 -6995593 - AluSg SINE Alu -2 308 1 404 126 12 2 chr2 243692989 243693245 -6994609 + AluSx SINE Alu 1 304 -5 33 0 0 0 chr2 243693457 243693490 -6994364 + AT_rich Low_complexity Low_complexity 1 33 0 239 53 0 26 chr2 243695179 243695217 -6992637 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1430 274 50 77 chr2 243695365 243695857 -6991997 + Zaphod DNA AcHobo 120 585 -3446 1838 143 7 0 chr2 243695857 243696151 -6991703 + AluSq SINE Alu 1 296 -17 1430 274 50 77 chr2 243696151 243696454 -6991400 + Zaphod DNA AcHobo 585 894 -3137 784 93 19 0 chr2 243696465 243696573 -6991281 - AluY SINE Alu -16 295 186 326 180 20 20 chr2 243696579 243696679 -6991175 + Zaphod DNA AcHobo 889 988 -3043 1035 218 76 39 chr2 243696686 243696764 -6991090 + Zaphod DNA AcHobo 3602 3676 -355 2093 108 0 7 chr2 243696764 243697060 -6990794 - AluSc SINE Alu -15 294 1 1035 218 76 39 chr2 243697060 243697362 -6990492 + Zaphod DNA AcHobo 3676 3996 -35 396 375 57 39 chr2 243697404 243697897 -6989957 - L1M4 LINE L1 -1017 5129 4628 204 226 32 11 chr2 243698574 243698667 -6989187 + CT-rich Low_complexity Low_complexity 4 98 0 737 129 28 28 chr2 243698679 243698857 -6988997 + CT-rich Low_complexity Low_complexity 1 178 0 1776 163 13 0 chr2 243698857 243699158 -6988696 - AluJo SINE Alu -7 305 1 249 288 50 0 chr2 243699565 243699645 -6988209 - MER45A DNA AcHobo -44 134 51 2333 89 0 0 chr2 243699914 243700216 -6987638 - AluSg SINE Alu -8 302 1 2569 26 0 7 chr2 243700425 243700727 -6987127 - AluY SINE Alu -11 300 1 2241 194 49 7 chr2 243700834 243701282 -6986572 - MLT1C LTR MaLR 0 467 1 1033 61 0 0 chr2 243701403 243701535 -6986319 + AluY SINE Alu 167 298 -13 189 121 0 0 chr2 243702025 243702058 -6985796 + (T)n Simple_repeat Simple_repeat 1 33 0 1591 135 11 21 chr2 243702240 243702358 -6985496 + AluSx SINE Alu 4 122 -184 207 0 0 0 chr2 243702358 243702381 -6985473 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1591 135 11 21 chr2 243702381 243702568 -6985286 + AluSx SINE Alu 122 306 0 210 71 0 0 chr2 243702578 243702606 -6985248 + (TG)n Simple_repeat Simple_repeat 1 28 0 258 95 0 0 chr2 243702792 243702834 -6985020 + (A)n Simple_repeat Simple_repeat 1 42 0 1941 131 0 10 chr2 243704567 243704872 -6982982 + AluSc SINE Alu 1 302 -7 377 248 95 0 chr2 243706108 243706213 -6981641 + LTR67 LTR ERVL 440 554 -3 305 192 240 55 chr2 243706218 243706364 -6981490 + MIR SINE MIR 1 173 -89 1867 155 51 61 chr2 243706406 243706580 -6981274 - MLT1B LTR MaLR 0 390 216 1639 155 7 24 chr2 243706580 243706876 -6980978 - AluJb SINE Alu -21 291 1 1867 155 51 61 chr2 243706876 243707095 -6980759 - MLT1B LTR MaLR -174 216 1 432 97 0 0 chr2 243708477 243708539 -6979315 + (TCTG)n Simple_repeat Simple_repeat 3 64 0 2082 123 3 13 chr2 243708638 243708954 -6978900 + AluSp SINE Alu 1 313 0 6594 130 19 4 chr2 243709060 243710943 -6976911 + L1PA14 LINE L1 4252 6161 0 31 26 0 0 chr2 243711066 243711104 -6976750 + AT_rich Low_complexity Low_complexity 1 38 0 2847 208 78 55 chr2 243711338 243711785 -6976069 - L1ME2 LINE L1 -19 6145 5710 2008 120 0 4 chr2 243711785 243712080 -6975774 + AluSx SINE Alu 11 304 0 2847 208 78 55 chr2 243712080 243712656 -6975198 - L1ME2 LINE L1 -454 5710 5102 2235 232 62 120 chr2 243712668 243713289 -6974565 - L1 LINE L1 -1170 4976 4321 1031 179 0 0 chr2 243713289 243713457 -6974397 + AluJb SINE Alu 135 302 -10 2235 232 62 120 chr2 243713457 243714250 -6973604 - L1 LINE L1 -1825 4321 3544 2084 161 30 25 chr2 243714250 243714611 -6973243 + THE1B LTR MaLR 1 363 -1 2235 232 62 120 chr2 243714611 243714634 -6973220 - L1 LINE L1 -2602 3544 3521 1323 156 24 0 chr2 243715324 243715535 -6972319 + AluJo SINE Alu 76 291 -21 180 176 0 0 chr2 243715568 243715602 -6972252 + (TG)n Simple_repeat Simple_repeat 1 34 0 2210 200 72 26 chr2 243715616 243716048 -6971806 - L1MA9 LINE L1 -54 6258 5847 1365 188 145 0 chr2 243716048 243716352 -6971502 - MER7A DNA MER2_type 0 346 1 2210 200 72 26 chr2 243716352 243716366 -6971488 - L1MA9 LINE L1 -465 5847 5835 1977 116 46 23 chr2 243716366 243716668 -6971186 + AluSg SINE Alu 1 309 -1 2210 200 72 26 chr2 243716668 243716830 -6971024 - L1MA9 LINE L1 -477 5835 5621 4994 82 20 16 chr2 243718115 243718821 -6969033 - L1PA11 LINE L1 -2 6172 5464 22 0 0 0 chr2 243719354 243719376 -6968478 + GC_rich Low_complexity Low_complexity 1 22 0 281 0 0 71 chr2 243719610 243719652 -6968202 + (CGGGGG)n Simple_repeat Simple_repeat 3 41 0 267 286 11 0 chr2 243720231 243720322 -6967532 + L2 LINE L2 3219 3310 -3 300 215 354 8 chr2 243721161 243721291 -6966563 + MIR SINE MIR 88 262 0 247 351 163 5 chr2 243722375 243722577 -6965277 + MIR SINE MIR 29 262 0 1987 171 139 0 chr2 243723348 243723722 -6964132 + MSTB LTR MaLR 1 426 0 451 283 117 45 chr2 243723781 243724208 -6963646 - L2 LINE L2 0 3272 2815 1985 130 3 23 chr2 243724465 243724766 -6963088 + AluSx SINE Alu 1 295 -17 365 214 0 0 chr2 243724922 243724992 -6962862 - L2 LINE L2 0 3313 3244 2442 80 3 0 chr2 243725208 243725508 -6962346 + AluSx SINE Alu 1 301 -11 243 0 0 0 chr2 243725954 243725981 -6961873 + (A)n Simple_repeat Simple_repeat 1 27 0 2022 112 0 4 chr2 243725989 243726266 -6961588 + AluSx SINE Alu 5 280 -32 282 29 0 0 chr2 243726268 243726303 -6961551 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 9466 157 21 28 chr2 243726378 243726573 -6961281 + L1MA7 LINE L1 3022 3217 -3074 2125 150 0 3 chr2 243726573 243726886 -6960968 + AluSx SINE Alu 1 312 0 9466 157 21 28 chr2 243726886 243729807 -6958047 + L1MA7 LINE L1 3217 6291 0 216 264 0 17 chr2 243729971 243730089 -6957765 + CT-rich Low_complexity Low_complexity 1 116 0 235 230 301 29 chr2 243730305 243730514 -6957340 + MLT1K LTR MaLR 19 284 -304 249 186 108 78 chr2 243731963 243732065 -6955789 - MIR SINE MIR -111 151 47 336 277 109 0 chr2 243732139 243732258 -6955596 + MIR3 SINE MIR 58 189 -19 247 270 40 0 chr2 243732273 243732347 -6955507 - L2 LINE L2 -5 3308 3232 455 272 39 95 chr2 243732963 243733168 -6954686 - HAL1 LINE L1 -1043 1464 1290 2323 109 0 3 chr2 243733168 243733471 -6954383 + AluSx SINE Alu 1 302 -10 455 272 39 95 chr2 243733471 243733655 -6954199 - HAL1 LINE L1 -1217 1290 1097 427 316 6 12 chr2 243733689 243733857 -6953997 - L1MC4a LINE L1 -1876 5932 5766 557 341 98 11 chr2 243734118 243734576 -6953278 - L2 LINE L2 -580 2734 2237 474 279 100 73 chr2 243734628 243735079 -6952775 + L2 LINE L2 2851 3313 0 1014 194 29 19 chr2 243735377 243735583 -6952271 + L1PB3 LINE L1 5946 6153 -1 2100 118 0 20 chr2 243736187 243736492 -6951362 + AluSc SINE Alu 1 299 -10 2394 103 0 0 chr2 243736868 243737180 -6950674 + AluSx SINE Alu 1 312 0 37648 33 30 2 chr2 243737350 243741865 -6945989 - L1P LINE L1 -1504 4642 1 2232 108 3 0 chr2 243743443 243743738 -6944116 + AluSq SINE Alu 1 296 -17 798 243 66 86 chr2 243745221 243745500 -6942354 - MLT1C LTR MaLR -12 455 187 2155 136 0 3 chr2 243745500 243745809 -6942045 + AluSq SINE Alu 1 308 -5 798 243 66 86 chr2 243745809 243745985 -6941869 - MLT1C LTR MaLR -280 187 9 2356 110 0 0 chr2 243746209 243746517 -6941337 - AluSx SINE Alu -3 309 2 2347 89 0 7 chr2 243746541 243746832 -6941022 - AluSq SINE Alu -16 297 9 469 278 0 0 chr2 243747088 243747195 -6940659 + MER45B DNA AcHobo 386 492 -548 558 126 21 11 chr2 243747195 243747290 -6940564 + MER4A LTR ERV1 3 98 -566 654 149 134 6 chr2 243747290 243747479 -6940375 + MER4A LTR ERV1 261 629 -137 859 144 0 15 chr2 243747669 243747801 -6940053 + MER4A LTR ERV1 533 662 -2 2643 179 26 30 chr2 243747811 243748342 -6939512 + MER45B DNA AcHobo 495 1023 -17 218 164 18 0 chr2 243749784 243749839 -6938015 + (TA)n Simple_repeat Simple_repeat 2 57 0 369 283 50 0 chr2 243749975 243750095 -6937759 + MIR SINE MIR 64 189 -73 980 136 138 185 chr2 243750778 243751186 -6936668 + MSTA LTR MaLR 1 389 -39 1751 113 0 0 chr2 243751186 243751444 -6936410 - AluSg SINE Alu 0 311 54 980 136 138 185 chr2 243751444 243751483 -6936371 + MSTA LTR MaLR 389 428 0 2076 146 3 0 chr2 243751914 243752209 -6935645 + AluSx SINE Alu 1 296 -16 378 260 42 62 chr2 243752295 243752487 -6935367 + L1MC4a LINE L1 5732 5919 -1889 1773 162 52 25 chr2 243752663 243753028 -6934826 + THE1C LTR MaLR 1 375 0 2447 103 14 35 chr2 243753274 243753644 -6934210 - THE1B LTR MaLR -2 362 1 243 219 61 24 chr2 243754298 243754380 -6933474 + HAL1b LINE L1 402 486 -862 1656 128 7 44 chr2 243754428 243754529 -6933325 + AluSx SINE Alu 41 144 -278 2450 71 3 7 chr2 243754529 243754839 -6933015 + AluY SINE Alu 1 309 -2 1656 128 7 44 chr2 243754839 243755129 -6932725 + AluSx SINE Alu 144 422 0 1002 268 48 0 chr2 243755992 243756261 -6931593 - AluJo SINE Alu -30 282 1 2260 124 48 20 chr2 243756742 243757096 -6930758 + THE1B LTR MaLR 1 364 0 539 205 133 0 chr2 243757658 243757809 -6930045 + MIR SINE MIR 35 205 -57 247 377 85 0 chr2 243760178 243760308 -6927546 + L2 LINE L2 3100 3240 -32 1135 209 60 32 chr2 243760663 243760978 -6926876 + MLT1C LTR MaLR 1 324 -143 521 258 65 0 chr2 243761462 243761617 -6926237 + MLT1C LTR MaLR 301 465 -2 725 313 0 5 chr2 243761624 243761819 -6926035 - MIR SINE MIR -9 253 60 769 193 31 72 chr2 243764621 243764844 -6923010 - MER20 DNA MER1_type -5 214 1 220 286 48 0 chr2 243766628 243766691 -6921163 - MER5A DNA MER1_type -38 151 86 216 0 0 0 chr2 243766960 243766984 -6920870 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 2159 166 47 30 chr2 243767358 243767829 -6920025 + L1MB5 LINE L1 5688 6166 -8 234 155 19 21 chr2 243768531 243768584 -6919270 - MIR SINE MIR -61 147 101 302 187 70 76 chr2 243769393 243769450 -6918404 + MIR SINE MIR 27 83 -145 1735 157 27 3 chr2 243769450 243769750 -6918104 - AluJb SINE Alu -5 307 1 302 187 70 76 chr2 243769750 243769834 -6918020 + MIR SINE MIR 83 166 -62 2190 110 0 3 chr2 243770039 243770349 -6917505 + AluSx SINE Alu 1 309 -3 186 307 140 66 chr2 243770693 243770921 -6916933 - L3 LINE CR1 -748 829 585 211 315 45 0 chr2 243771412 243771501 -6916353 + MIR3 SINE MIR 84 176 -32 184 308 0 0 chr2 243771907 243771959 -6915895 - MIR SINE MIR -72 136 85 204 188 0 0 chr2 243771976 243772008 -6915846 + polypurine Low_complexity Low_complexity 2 33 0 560 288 84 0 chr2 243773441 243773632 -6914222 + L1MB5 LINE L1 5959 6165 -9 2353 78 0 3 chr2 243774053 243774359 -6913495 - AluY SINE Alu -6 305 1 302 310 41 75 chr2 243777081 243777349 -6910505 + LTR16A LTR ERVL 71 329 -121 1686 188 105 26 chr2 243781065 243781495 -6906359 + MLT1C LTR MaLR 1 464 -3 1926 165 81 0 chr2 243781989 243782323 -6905531 - MER46B DNA MER2_type 0 236 1 1123 232 81 7 chr2 243782344 243782654 -6905200 + MER58B DNA MER1_type 9 341 0 2194 99 0 0 chr2 243783840 243784134 -6903720 + AluY SINE Alu 1 294 -17 268 253 111 10 chr2 243784674 243784773 -6903081 + MIR SINE MIR 37 145 -117 878 182 18 6 chr2 243784951 243785121 -6902733 - MER5A DNA MER1_type 0 189 18 1680 120 131 0 chr2 243785127 243785394 -6902460 + AluSp SINE Alu 1 302 -1 332 238 71 63 chr2 243785457 243785583 -6902271 - MIR SINE MIR -87 175 49 190 246 116 0 chr2 243785902 243785971 -6901883 + MIR SINE MIR 49 125 -137 427 296 62 58 chr2 243787178 243787438 -6900416 + LTR16C LTR ERVL 231 491 0 1636 184 7 23 chr2 243787693 243788002 -6899852 + AluJo SINE Alu 5 308 -4 1736 209 71 33 chr2 243788203 243788682 -6899172 - MLT1D LTR MaLR -8 497 1 318 234 227 21 chr2 243788746 243788887 -6898967 + L2 LINE L2 3144 3313 0 181 267 33 56 chr2 243789047 243789137 -6898717 + L2 LINE L2 3208 3295 -18 735 129 221 14 chr2 243791166 243791306 -6896548 + AluSg/x SINE Alu 130 298 -11 572 273 41 45 chr2 243791559 243791710 -6896144 + L1ME3A LINE L1 5627 5777 -393 1908 156 46 9 chr2 243791710 243792036 -6895818 + MER44D DNA MER2_type 1 608 -1 572 273 41 45 chr2 243792036 243792149 -6895705 + L1ME3A LINE L1 5777 5903 -267 1460 272 83 55 chr2 243792149 243792726 -6895128 - MLT1E LTR MaLR 0 593 1 572 273 41 45 chr2 243792726 243792790 -6895064 + L1ME3A LINE L1 5903 5966 -204 270 56 0 0 chr2 243793859 243793895 -6893959 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 2225 88 3 3 chr2 243793945 243794252 -6893602 + AluSq SINE Alu 7 313 0 204 254 0 0 chr2 243794359 243794418 -6893436 + (TG)n Simple_repeat Simple_repeat 2 60 0 1834 236 85 16 chr2 243795057 243795561 -6892293 - L1MC3 LINE L1 0 7785 7247 1632 216 0 0 chr2 243796295 243796601 -6891253 - AluJb SINE Alu -6 306 1 185 275 0 0 chr2 243796644 243796684 -6891170 + MIR SINE MIR 106 145 -117 22 0 0 0 chr2 243797144 243797166 -6890688 + AT_rich Low_complexity Low_complexity 1 22 0 2106 98 58 0 chr2 243797593 243797888 -6889966 - AluSx SINE Alu 0 312 1 451 215 47 0 chr2 243799416 243799523 -6888331 - MER94 DNA DNA -16 118 7 2320 81 10 13 chr2 243799837 243800147 -6887707 - AluSc SINE Alu 0 309 1 381 259 45 27 chr2 243800313 243800425 -6887429 + MLT1H1 LTR MaLR 225 338 -217 2086 239 23 5 chr2 243800431 243800871 -6886983 - MER82 DNA MER2_type -6 647 200 690 258 6 0 chr2 243801171 243801330 -6886524 - MER82 DNA MER2_type -449 204 45 892 230 44 19 chr2 243801335 243801575 -6886279 + MLT1H1 LTR MaLR 298 553 -2 2653 106 27 8 chr2 243802000 243802368 -6885486 + THE1C LTR MaLR 1 375 0 1183 194 38 35 chr2 243803122 243803580 -6884274 + MLT1D LTR MaLR 1 505 0 198 341 22 59 chr2 243803583 243803718 -6884136 - MIR SINE MIR -109 153 24 383 260 62 34 chr2 243804625 243804771 -6883083 - L2 LINE L2 0 3313 3164 1717 144 48 0 chr2 243806020 243806311 -6881543 - AluJb SINE Alu -3 309 5 506 281 178 0 chr2 243806576 243806818 -6881036 + MER102b DNA MER1_type 47 331 -10 373 263 25 17 chr2 243807514 243807632 -6880222 - L1MD1 LINE L1 -10 6232 6114 1714 143 24 50 chr2 243807641 243807991 -6879863 + MSTC LTR MaLR 31 428 0 1037 183 170 0 chr2 243807991 243808221 -6879633 - L1MD2 LINE L1 -128 6231 5963 1105 69 0 7 chr2 243808267 243808411 -6879443 + AluSq/x SINE Alu 1 143 -170 741 208 7 0 chr2 243808412 243808566 -6879288 - L1MD2 LINE L1 -346 5820 5666 459 250 100 6 chr2 243808985 243809042 -6878812 - MER5A DNA MER1_type -7 182 132 2113 112 0 0 chr2 243809042 243809336 -6878518 + AluSg SINE Alu 1 294 -16 459 250 100 6 chr2 243809336 243809438 -6878416 - MER5A DNA MER1_type -57 132 8 279 265 20 39 chr2 243809844 243809946 -6877908 - MARNA DNA Mariner -145 441 342 207 133 0 44 chr2 243810252 243810297 -6877557 + (GGGTG)n Simple_repeat Simple_repeat 4 46 0 2102 97 0 32 chr2 243810690 243810999 -6876855 - AluSg SINE Alu -11 299 1 649 259 84 53 chr2 243811052 243811459 -6876395 + MLT1J1 LTR MaLR 29 450 0 863 281 82 49 chr2 243811681 243811927 -6875927 - L1ME4a LINE L1 -8 6113 5877 2004 133 0 9 chr2 243811927 243812242 -6875612 - AluSx SINE Alu 0 312 1 863 281 82 49 chr2 243812242 243812568 -6875286 - L1ME4a LINE L1 -244 5877 5522 2198 188 37 105 chr2 243813262 243813863 -6873991 - MLT1F1 LTR MaLR -2 565 6 497 246 24 8 chr2 243813972 243814098 -6873756 - MER46C DNA MER2_type -3 335 208 845 228 10 15 chr2 243814437 243814634 -6873220 - MER46C DNA MER2_type -140 198 3 2000 195 13 1 chr2 243814704 243815066 -6872788 + MLT1A1 LTR MaLR 1 424 -4 25 31 0 0 chr2 243815087 243815119 -6872735 + AT_rich Low_complexity Low_complexity 1 32 0 2334 148 36 19 chr2 243816970 243817389 -6870465 - MSTB LTR MaLR 0 426 1 1174 264 127 42 chr2 243817678 243818174 -6869680 + MLT1H LTR MaLR 10 547 -2 2353 155 62 0 chr2 243818190 243818591 -6869263 + MSTB LTR MaLR 1 426 0 27 0 0 0 chr2 243818679 243818706 -6869148 + AT_rich Low_complexity Low_complexity 1 27 0 180 152 0 0 chr2 243819052 243819085 -6868769 + T-rich Low_complexity Low_complexity 1 33 0 312 307 69 55 chr2 243820270 243820488 -6867366 - MIR SINE MIR -17 245 25 447 63 0 0 chr2 243820586 243820649 -6867205 + (TG)n Simple_repeat Simple_repeat 2 64 0 187 194 0 0 chr2 243820891 243820922 -6866932 + MIR SINE MIR 116 146 -116 291 310 35 9 chr2 243821734 243821850 -6866004 + MIR SINE MIR 123 241 -21 2129 154 28 3 chr2 243822840 243823197 -6864657 + MER47A DNA MER2_type 1 366 0 262 197 30 76 chr2 243823390 243823456 -6864398 - L2 LINE L2 0 3272 3210 1734 149 11 0 chr2 243823804 243824107 -6863747 - AluSx SINE Alu 0 310 5 565 291 119 18 chr2 243824314 243824657 -6863197 - L1MC4a LINE L1 -1868 5940 5563 1761 126 33 0 chr2 243825533 243825804 -6862050 - AluSq SINE Alu -33 280 1 387 304 57 53 chr2 243826232 243826479 -6861375 + L3 LINE CR1 1143 1390 -187 * 574 291 122 0 chr2 243826472 243826668 -6861186 + MIR SINE MIR 19 238 -24 252 175 0 63 chr2 243827319 243827382 -6860472 + AluSp/q SINE Alu 242 300 -3 * 456 126 10 87 chr2 243827364 243827467 -6860387 + MER63 DNA MER1_type 655 749 -311 1525 50 0 0 chr2 243828396 243828576 -6859278 - MLT2A2 LTR ERVL 0 453 274 313 26 0 0 chr2 243828576 243828615 -6859239 - MLT2A2 LTR ERVL -408 45 7 990 177 68 5 chr2 243830848 243831040 -6856814 + MER2 DNA MER2_type 3 206 -139 239 235 0 0 chr2 243831066 243831117 -6856737 + MER2 DNA MER2_type 269 319 -26 438 247 86 43 chr2 243831176 243831338 -6856516 + MIR SINE MIR 17 185 -77 1650 40 5 0 chr2 243831447 243831646 -6856208 - AluY SINE Alu -13 298 99 1645 163 3 3 chr2 243831725 243832013 -6855841 + AluSp SINE Alu 5 292 -21 417 363 56 8 chr2 243833010 243833244 -6854610 + L1ME4a LINE L1 5678 5922 -199 707 240 122 10 chr2 243833603 243833799 -6854055 + MIR SINE MIR 44 261 -1 452 222 103 8 chr2 243835053 243835179 -6852675 + MER69 DNA AcHobo 1 138 -1088 1450 202 0 42 chr2 243835179 243835491 -6852363 + AluJo SINE Alu 1 299 -13 1859 223 47 32 chr2 243835636 243836232 -6851622 + MER69 DNA AcHobo 1911 2515 -11 182 314 48 79 chr2 243836592 243836882 -6850972 + L2 LINE L2 2626 2906 -408 1725 148 13 31 chr2 243837050 243837368 -6850486 - AluJb SINE Alu 0 312 1 1575 155 25 22 chr2 243837690 243837968 -6849886 + AluSx SINE Alu 1 279 -33 428 77 15 0 chr2 243837969 243838034 -6849820 + (GA)n Simple_repeat Simple_repeat 1 66 0 189 171 0 0 chr2 243838037 243838072 -6849782 + GA-rich Low_complexity Low_complexity 2 36 0 555 265 74 101 chr2 243838585 243838883 -6848971 - MLT1K LTR MaLR -2 586 297 2992 194 31 61 chr2 243839047 243839757 -6848097 + LTR8 LTR ERV1 2 690 -1 650 211 78 7 chr2 243840240 243840382 -6847472 + MER96 DNA MER1_type? 1 152 -23 436 254 109 0 chr2 243840380 243840490 -6847364 - MER96 DNA MER1_type? -48 127 6 * 410 183 0 0 chr2 243840914 243840985 -6846869 - AluJ/FRAM SINE Alu -13 289 219 965 181 42 9 chr2 243840985 243841200 -6846654 - L1MB8 LINE L1 -14 6164 5943 192 77 0 0 chr2 243841486 243841512 -6846342 + (A)n Simple_repeat Simple_repeat 1 26 0 243 0 0 0 chr2 243841708 243841735 -6846119 + (TG)n Simple_repeat Simple_repeat 1 27 0 258 346 0 0 chr2 243841752 243841856 -6845998 + (TG)n Simple_repeat Simple_repeat 2 105 0 300 360 41 7 chr2 243842127 243842274 -6845580 - L1ME LINE L1 -477 5644 5493 218 210 0 81 chr2 243842886 243842948 -6844906 + L2 LINE L2 3257 3313 0 1897 127 0 0 chr2 243843063 243843331 -6844523 + AluSx SINE Alu 1 268 -44 324 0 0 0 chr2 243843342 243843378 -6844476 + (TAA)n Simple_repeat Simple_repeat 2 37 0 287 157 14 0 chr2 243844609 243844679 -6843175 + (CACCAT)n Simple_repeat Simple_repeat 1 71 0 600 181 11 11 chr2 243844719 243844896 -6842958 + (CACCAT)n Simple_repeat Simple_repeat 3 179 0 515 213 30 5 chr2 243844952 243845362 -6842492 + (CACCAT)n Simple_repeat Simple_repeat 1 420 0 338 300 100 14 chr2 243845375 243845515 -6842339 - MIR SINE MIR -47 215 64 335 330 30 96 chr2 243846022 243846419 -6841435 - L2 LINE L2 -9 3263 2893 526 252 0 0 chr2 243846433 243846536 -6841318 - MER81 DNA DNA -9 105 3 239 362 43 22 chr2 243846536 243846674 -6841180 - L2 LINE L2 -459 2855 2715 24 32 0 0 chr2 243847446 243847477 -6840377 + AT_rich Low_complexity Low_complexity 1 31 0 217 349 30 0 chr2 243847477 243847543 -6840311 + L2 LINE L2 3137 3204 -68 576 216 11 127 chr2 243847571 243847689 -6840165 - MER5B DNA MER1_type 0 178 85 2100 112 0 0 chr2 243847689 243848016 -6839838 - AluSx SINE Alu 0 327 1 576 216 11 127 chr2 243848016 243848077 -6839777 - MER5B DNA MER1_type -93 85 19 345 313 61 8 chr2 243848083 243848214 -6839640 + MER5A DNA MER1_type 49 186 -3 337 290 28 19 chr2 243848368 243848475 -6839379 - MER5B DNA MER1_type -70 108 1 1812 174 39 13 chr2 243848653 243848964 -6838890 - MER7A DNA MER2_type 0 346 30 1637 184 51 60 chr2 243848966 243849401 -6838453 - MLT1C LTR MaLR -31 436 6 186 103 0 0 chr2 243849642 243849671 -6838183 + (CA)n Simple_repeat Simple_repeat 2 30 0 2216 157 113 9 chr2 243850673 243851105 -6836749 - L1MA7 LINE L1 -188 6103 5627 271 262 0 0 chr2 243851138 243851199 -6836655 + (TG)n Simple_repeat Simple_repeat 2 62 0 288 311 58 18 chr2 243852413 243852620 -6835234 + MIR SINE MIR 17 232 -30 2325 108 73 13 chr2 243852901 243853429 -6834425 - MER51A LTR ERV1 0 634 4 251 246 36 45 chr2 243853556 243853666 -6834188 + L1MC4a LINE L1 6070 6178 -1630 5618 23 0 0 chr2 243853903 243854928 -6832926 + L1PA4 LINE L1 4873 5897 -258 360 301 77 6 chr2 243854933 243855089 -6832765 - L2 LINE L2 -609 2705 2539 641 201 0 43 chr2 243855201 243855340 -6832514 - FLAM_A SINE Alu 0 133 1 1048 151 117 60 chr2 243855894 243856020 -6831834 + MER33 DNA MER1_type 1 118 -2467 1483 101 5 5 chr2 243856020 243856218 -6831636 + AluSg/x SINE Alu 94 291 -19 1048 151 117 60 chr2 243856218 243856389 -6831465 + MER33 DNA MER1_type 118 315 -9 285 326 69 17 chr2 243857331 243857564 -6830290 + L2 LINE L2 2731 2975 -339 248 32 0 0 chr2 243857718 243857749 -6830105 + AluY SINE Alu 1 31 -269 2528 74 0 0 chr2 243858036 243858347 -6829507 + AluY SINE Alu 1 311 0 5009 187 55 80 chr2 243858602 243859930 -6827924 + Charlie1a DNA MER1_type 1 1295 -160 12797 32 2 1 chr2 243860036 243861552 -6826302 - L1P LINE L1 -1298 4848 3331 1957 30 0 13 chr2 243861552 243861779 -6826075 + L1PA3 LINE L1 5924 6154 -1 35 0 0 0 chr2 243861781 243861816 -6826038 + AT_rich Low_complexity Low_complexity 1 35 0 1948 114 0 11 chr2 243861819 243862090 -6825764 + AluSc SINE Alu 1 268 -41 543 332 137 2 chr2 243862219 243862650 -6825204 + L2 LINE L2 2474 2962 -352 1337 194 17 106 chr2 243864308 243864715 -6823139 - MLT1D LTR MaLR -2 503 133 709 177 46 0 chr2 243864904 243865034 -6822820 + Charlie1a DNA MER1_type 1319 1454 -1 1223 272 69 9 chr2 243865038 243865600 -6822254 + L1M4 LINE L1 2703 3298 -2848 898 280 92 12 chr2 243865655 243866055 -6821799 + L1M4 LINE L1 3416 3847 -2299 1465 228 213 18 chr2 243866090 243866375 -6821479 + L1MCa LINE L1 16 244 -5663 4021 102 13 4 chr2 243866375 243866924 -6820930 - MER41A LTR ERV1 0 554 1 1465 228 213 18 chr2 243866924 243867349 -6820505 + L1MCa LINE L1 244 705 -5202 3629 68 4 19 chr2 243867349 243867822 -6820032 - MER4E LTR ERV1 0 766 301 404 130 13 13 chr2 243867922 243867999 -6819855 + L1MCa LINE L1 804 880 -5546 3238 187 24 60 chr2 243868043 243868743 -6819111 + LTR8 LTR ERV1 17 691 0 1696 196 5 42 chr2 243868743 243868808 -6819046 + L1MCa LINE L1 876 942 -5484 1652 154 3 74 chr2 243868808 243868958 -6818896 + AluJb SINE Alu 1 118 -194 1669 101 0 0 chr2 243868958 243869192 -6818662 + AluSg/x SINE Alu 78 311 0 1652 154 3 74 chr2 243869192 243869364 -6818490 + AluJb SINE Alu 118 301 -11 1696 196 5 42 chr2 243869364 243869681 -6818173 + L1MCa LINE L1 942 1244 -5182 790 277 82 10 chr2 243869696 243870108 -6817746 + L1M4 LINE L1 4374 4815 -1331 192 77 0 0 chr2 243870533 243870559 -6817295 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 2244 121 0 7 chr2 243870661 243870968 -6816886 + AluSx SINE Alu 1 305 -7 198 0 0 0 chr2 243872963 243872985 -6814869 + (A)n Simple_repeat Simple_repeat 1 22 0 299 246 112 65 chr2 243873331 243873546 -6814308 - MLT1L LTR MaLR -79 536 312 1660 207 38 23 chr2 243873583 243873979 -6813875 - L1MB5 LINE L1 -8 6166 5765 262 235 84 42 chr2 243873989 243874108 -6813746 - MLT1L LTR MaLR -325 290 167 2153 146 37 58 chr2 243874384 243874815 -6813039 - MSTB LTR MaLR -4 422 1 2396 211 33 15 chr2 243875188 243875734 -6812120 + MER74A LTR ERVL 1 556 -2 2183 119 3 0 chr2 243876018 243876312 -6811542 - AluSx SINE Alu -17 295 1 257 310 54 39 chr2 243876835 243876964 -6810890 + L2 LINE L2 3182 3312 -1 212 0 0 35 chr2 243877294 243877323 -6810531 + (TG)n Simple_repeat Simple_repeat 2 29 0 190 236 55 88 chr2 243877470 243877652 -6810202 - L2 LINE L2 -831 2483 2308 555 286 23 65 chr2 243878056 243878318 -6809536 - MIR SINE MIR -3 259 9 409 156 11 206 chr2 243878319 243878380 -6809474 + MER5A DNA MER1_type 16 87 -102 1772 191 3 0 chr2 243878380 243878683 -6809171 + AluJb SINE Alu 1 304 -8 409 156 11 206 chr2 243878683 243878801 -6809053 + MER5A DNA MER1_type 87 160 -29 236 320 135 17 chr2 243878814 243878992 -6808862 + L2 LINE L2 2860 3058 -214 1002 66 0 8 chr2 243879258 243879379 -6808475 + AluSq/x SINE Alu 18 137 -176 1042 151 0 0 chr2 243879632 243879791 -6808063 + AluSg/x SINE Alu 152 310 -2 186 43 0 0 chr2 243879799 243879822 -6808032 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1380 187 0 61 chr2 243879902 243880180 -6807674 - MSTD LTR MaLR 0 396 136 432 206 47 65 chr2 243880477 243880584 -6807270 - MSTD LTR MaLR -323 105 1 448 288 16 16 chr2 243880837 243880962 -6806892 - HsTC2 DNA Tc2 -1773 125 1 1921 158 42 25 chr2 243881259 243881619 -6806235 - MER47A DNA MER2_type 0 366 1 186 324 14 0 chr2 243881956 243882027 -6805827 + L2 LINE L2 3177 3248 -24 404 336 83 19 chr2 243882038 243882401 -6805453 - L2 LINE L2 0 3313 2928 325 306 37 37 chr2 243883185 243883319 -6804535 + L2 LINE L2 3180 3313 0 295 299 109 62 chr2 243884426 243884643 -6803211 + L3 LINE CR1 1105 1342 -235 1626 155 47 22 chr2 243884643 243884941 -6802913 + AluSx SINE Alu 1 305 0 295 299 109 62 chr2 243884941 243885026 -6802828 + L3 LINE CR1 1342 1422 -155 233 218 0 18 chr2 243887343 243887398 -6800456 + MER117 DNA MER1_type 6 59 -138 2430 219 93 38 chr2 243887400 243888207 -6799647 - L1MC4 LINE L1 -159 7883 7033 223 135 0 0 chr2 243888363 243888400 -6799454 - MIR SINE MIR -13 249 213 184 162 54 0 chr2 243888397 243888434 -6799420 + MIR SINE MIR 222 260 -2 * 1002 204 22 52 chr2 243888479 243888530 -6799324 - L1MC4 LINE L1 -989 7053 7002 2150 117 19 10 chr2 243888530 243888837 -6799017 - AluJb SINE Alu -2 310 1 1002 204 22 52 chr2 243888837 243889016 -6798838 - L1MC4 LINE L1 -1040 7002 6830 391 252 7 36 chr2 243889013 243889075 -6798779 - L1MEc LINE L1 -3563 2652 2590 * 1587 169 10 28 chr2 243889075 243889365 -6798489 - AluJo SINE Alu -7 305 21 391 252 7 36 chr2 243889365 243889441 -6798413 - L1MEc LINE L1 -3625 2590 2518 657 226 57 122 chr2 243889483 243889732 -6798122 + MLT1A2 LTR MaLR 31 250 -124 2256 106 7 0 chr2 243889732 243890033 -6797821 - AluSg SINE Alu -5 305 3 657 226 57 122 chr2 243890033 243890151 -6797703 + MLT1A2 LTR MaLR 250 374 0 369 225 71 24 chr2 243890154 243890323 -6797531 - L1MEc LINE L1 -3759 2456 2280 271 250 44 31 chr2 243890397 243890557 -6797297 - L1MEc LINE L1 -4142 2254 2093 246 329 0 0 chr2 243890759 243890829 -6797025 + L2 LINE L2 3153 3222 -50 2263 108 65 29 chr2 243891120 243891471 -6796383 + THE1B LTR MaLR 1 364 0 225 0 0 0 chr2 243891699 243891724 -6796130 + (A)n Simple_repeat Simple_repeat 1 25 0 183 238 0 0 chr2 243891738 243891780 -6796074 - MIR SINE MIR -9 253 212 3493 98 19 0 chr2 243892216 243892683 -6795171 - HSMAR1 DNA Mariner -236 1051 576 2224 121 0 0 chr2 243893636 243893933 -6793921 - AluSx SINE Alu -13 299 3 194 313 16 0 chr2 243895406 243895470 -6792384 - L2 LINE L2 -10 3303 3239 2454 252 66 90 chr2 243895713 243897118 -6790736 - HAL1 LINE L1 -4 2503 1131 2070 110 0 0 chr2 243897118 243897381 -6790473 - AluSx SINE Alu -28 284 22 2454 252 66 90 chr2 243897381 243897608 -6790246 - HAL1 LINE L1 -1376 1131 900 1129 125 12 0 chr2 243897609 243897777 -6790077 - MER4E LTR ERV1 0 766 597 4769 53 5 8 chr2 243897797 243898398 -6789456 - L1PA7 LINE L1 -1 6153 5555 2456 101 96 0 chr2 243898398 243898784 -6789070 + L1P LINE L1 4489 4911 -1235 3069 144 71 47 chr2 243898796 243899388 -6788466 - MER4D LTR ERV1 -297 606 1 612 323 113 36 chr2 243899989 243900432 -6787422 - L2 LINE L2 -1 3312 2836 318 305 178 0 chr2 243900547 243900760 -6787094 - L2 LINE L2 -762 2552 2302 198 191 0 0 chr2 243901469 243901511 -6786343 + (TG)n Simple_repeat Simple_repeat 1 42 0 1333 246 82 20 chr2 243902445 243902904 -6784950 - MLT1E LTR MaLR 0 593 103 257 317 138 8 chr2 243902895 243903018 -6784836 - MLT1E LTR MaLR -454 139 1 * 1065 181 8 68 chr2 243903019 243903084 -6784770 + MER58A DNA MER1_type 1 68 -2352 1592 173 23 3 chr2 243903084 243903418 -6784436 - AluJo SINE Alu 0 312 2 1065 181 8 68 chr2 243903418 243903589 -6784265 + MER58A DNA MER1_type 68 223 -1 520 227 62 34 chr2 243903594 243903770 -6784084 - L1MC4a LINE L1 -1910 5898 5718 1855 229 89 28 chr2 243903793 243904391 -6783463 + LTR48B LTR ERV1 1 634 -10 1641 145 25 4 chr2 243904506 243904782 -6783072 + AluJb SINE Alu 14 295 -17 22 0 0 0 chr2 243905648 243905670 -6782184 + AT_rich Low_complexity Low_complexity 1 22 0 2111 115 0 0 chr2 243905839 243906134 -6781720 + AluSq SINE Alu 1 295 -18 239 284 137 0 chr2 243906338 243906440 -6781414 + HAL1 LINE L1 1431 1546 -961 248 167 103 90 chr2 243906676 243906717 -6781137 - MER53 DNA DNA -89 100 61 1844 166 7 0 chr2 243906717 243907012 -6780842 + AluSx SINE Alu 1 297 -15 248 167 103 90 chr2 243907012 243907048 -6780806 - MER53 DNA DNA -128 61 22 227 261 0 58 chr2 243907214 243907283 -6780571 - MLT1J LTR MaLR -334 177 113 1206 240 142 8 chr2 243907475 243907884 -6779970 - MLT1H LTR MaLR -3 546 43 193 263 40 71 chr2 243907930 243908029 -6779825 - L2 LINE L2 -6 3307 3212 1729 147 32 0 chr2 243908119 243908404 -6779450 + AluSx SINE Alu 1 294 -18 253 196 0 0 chr2 243908491 243908542 -6779312 - L1ME3A LINE L1 -8 6162 6112 240 242 16 16 chr2 243909491 243909553 -6778301 + L2 LINE L2 3211 3272 0 1043 260 69 15 chr2 243909702 243910037 -6777817 + LTR16C LTR ERVL 129 481 -10 262 340 50 0 chr2 243910319 243910419 -6777435 + L2 LINE L2 3208 3312 -1 1644 164 25 11 chr2 243910728 243911003 -6776851 + MLT1F LTR MaLR 264 542 0 1892 139 14 7 chr2 243911122 243911551 -6776303 - AluSx SINE Alu 0 431 1 364 145 32 0 chr2 243912383 243912445 -6775409 + L2 LINE L2 3206 3269 -3 255 254 32 0 chr2 243912554 243912617 -6775237 - L2 LINE L2 -8 3305 3241 196 274 211 32 chr2 243912622 243912717 -6775137 + MIR SINE MIR 128 239 -23 793 261 11 0 chr2 243912921 243913097 -6774757 - MER45A DNA AcHobo 0 178 1 512 279 68 7 chr2 243913765 243913912 -6773942 - L2 LINE L2 0 3313 3158 448 273 97 18 chr2 243914786 243914951 -6772903 - MLT1J LTR MaLR -323 188 11 1177 288 47 59 chr2 243915256 243915486 -6772368 - MLT1J LTR MaLR 0 511 280 1602 186 24 0 chr2 243915486 243915781 -6772073 + AluJo SINE Alu 1 302 -10 1177 288 47 59 chr2 243915781 243916057 -6771797 - MLT1J LTR MaLR -231 280 11 512 194 69 69 chr2 243916458 243916664 -6771190 + MLT1C LTR MaLR 1 215 -175 16474 105 1 8 chr2 243916860 243919125 -6768729 - L1P LINE L1 -3872 2274 26 213 262 0 0 chr2 243919487 243919548 -6768306 + CT-rich Low_complexity Low_complexity 4 64 0 180 0 0 0 chr2 243919549 243919569 -6768285 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 2130 103 0 7 chr2 243919574 243919864 -6767990 - AluSx SINE Alu -24 288 1 329 214 136 0 chr2 243919925 243920028 -6767826 + MIR SINE MIR 110 226 -36 254 313 121 33 chr2 243920732 243920914 -6766940 + MIR SINE MIR 59 256 -6 1285 173 113 36 chr2 243921508 243921809 -6766045 - MER1B DNA MER1_type -12 327 4 739 327 113 44 chr2 243922008 243922403 -6765451 + L2 LINE L2 2230 2596 -717 2149 207 31 15 chr2 243922403 243922861 -6764993 - MLT1C LTR MaLR 0 467 3 739 327 113 44 chr2 243922861 243923479 -6764375 + L2 LINE L2 2596 3313 0 978 193 10 19 chr2 243923568 243923775 -6764079 - MER20 DNA MER1_type 0 219 15 231 341 22 11 chr2 243923950 243924041 -6763813 + MIR3 SINE MIR 15 106 -102 1652 172 7 3 chr2 243924880 243925177 -6762677 - AluJo SINE Alu -14 298 1 1236 227 47 104 chr2 243926178 243926649 -6761205 + MLT1C LTR MaLR 14 457 -10 256 84 102 4 chr2 243927894 243927940 -6759914 - MLT2C2 LTR ERVL 0 464 423 22 0 0 0 chr2 243928200 243928222 -6759632 + AT_rich Low_complexity Low_complexity 1 22 0 278 329 128 0 chr2 243928605 243928769 -6759085 - L2 LINE L2 -6 3307 3123 625 248 0 20 chr2 243928850 243929003 -6758851 - MIR SINE MIR -50 212 63 2225 75 0 60 chr2 243930151 243930470 -6757384 + AluSx SINE Alu 1 300 -12 1584 192 48 63 chr2 243930498 243930894 -6756960 + MLT1B LTR MaLR 1 390 0 308 262 57 25 chr2 243931198 243931320 -6756534 + MER5A DNA MER1_type 34 159 -30 1779 159 0 7 chr2 243931716 243932012 -6755842 - AluSx SINE Alu -18 294 1 289 325 175 0 chr2 243932461 243932615 -6755239 + MER5A DNA MER1_type 9 189 0 312 158 0 0 chr2 243932707 243932764 -6755090 + (TATAA)n Simple_repeat Simple_repeat 5 61 0 485 331 135 31 chr2 243933772 243934327 -6753527 + HAL1b LINE L1 121 733 -615 382 315 4 115 chr2 243934459 243934694 -6753160 + L1MC4a LINE L1 6407 6615 -1193 233 29 29 0 chr2 243934710 243934744 -6753110 + (CA)n Simple_repeat Simple_repeat 1 35 0 1750 144 17 27 chr2 243934883 243935181 -6752673 + AluJb SINE Alu 1 295 -17 1208 292 25 60 chr2 243935451 243936006 -6751848 - ERVL LTR ERVL -1407 4357 3822 373 274 9 0 chr2 243936123 243936229 -6751625 - MER103 DNA DNA -3 163 57 1680 153 17 10 chr2 243936386 243936686 -6751168 - AluJo SINE Alu -10 302 1 208 143 0 0 chr2 243937857 243937892 -6749962 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1980 130 7 0 chr2 243938270 243938569 -6749285 + AluJb SINE Alu 1 301 -11 330 299 196 21 chr2 243938707 243938901 -6748953 - MIR SINE MIR -4 258 31 1967 133 7 0 chr2 243940941 243941250 -6746604 - AluSx SINE Alu 0 312 2 392 203 78 70 chr2 243941501 243941629 -6746225 - MER69 DNA AcHobo -1090 136 8 225 229 48 12 chr2 243942964 243943047 -6744807 + CT-rich Low_complexity Low_complexity 5 90 0 346 214 11 56 chr2 243944460 243944549 -6743305 - Charlie8 DNA MER1_type -2205 212 128 1175 261 15 18 chr2 243944600 243944930 -6742924 - L1ME3A LINE L1 -11 6159 5831 423 231 132 94 chr2 243945242 243945454 -6742400 - MIR SINE MIR -3 259 40 2046 121 21 63 chr2 243945939 243946102 -6741752 + MLT1A1 LTR MaLR 1 169 -196 2095 141 3 3 chr2 243946102 243946414 -6741440 + AluSx SINE Alu 1 312 0 2046 121 21 63 chr2 243946414 243946631 -6741223 + MLT1A1 LTR MaLR 169 365 0 1217 219 67 72 chr2 243947670 243948100 -6739754 - MLT1C LTR MaLR -6 461 34 379 233 203 63 chr2 243948151 243948318 -6739536 + L2 LINE L2 1513 1655 -1659 2130 118 10 0 chr2 243948318 243948624 -6739230 - AluSx SINE Alu -3 309 1 379 233 203 63 chr2 243948624 243948791 -6739063 + L2 LINE L2 1655 1894 -1420 345 318 24 8 chr2 243948815 243948941 -6738913 - MER94 DNA DNA -6 128 1 329 273 29 29 chr2 243948945 243949084 -6738770 + L2 LINE L2 1901 2039 -1275 241 241 17 0 chr2 243949171 243949229 -6738625 - LTR67 LTR ERVL -4 553 495 182 358 0 0 chr2 243949325 243949392 -6738462 - L2 LINE L2 -1475 1839 1773 752 207 18 41 chr2 243949402 243949571 -6738283 + FRAM SINE Alu 1 164 -12 1493 194 43 19 chr2 243949699 243950116 -6737738 + L1M4 LINE L1 2788 3214 -2932 2195 198 58 12 chr2 243950327 243950806 -6737048 - MLT1D LTR MaLR 0 505 5 2062 135 10 6 chr2 243951282 243951594 -6736260 - AluSq SINE Alu 0 313 1 23027 46 2 7 chr2 243951737 243955374 -6732480 - L1PA5 LINE L1 -3 6151 2530 1871 149 0 4 chr2 243955474 243955743 -6732111 - AluJb SINE Alu -44 268 1 850 99 59 0 chr2 243955744 243955896 -6731958 + L1MA7 LINE L1 6128 6288 -3 1614 81 65 69 chr2 243956607 243956646 -6731208 - MSTA LTR MaLR 0 428 390 1836 74 0 4 chr2 243956646 243956876 -6730978 + AluY SINE Alu 79 307 -4 1614 81 65 69 chr2 243956876 243957096 -6730758 - MSTA LTR MaLR -38 390 170 2431 94 7 0 chr2 243958014 243958322 -6729532 + AluSg SINE Alu 1 310 0 213 341 61 23 chr2 243958474 243958606 -6729248 + MER5B DNA MER1_type 4 140 -38 206 222 0 48 chr2 243959212 243959275 -6728579 + C-rich Low_complexity Low_complexity 6 65 0 2185 130 39 30 chr2 243960047 243960408 -6727446 - THE1B LTR MaLR 0 364 1 262 214 143 50 chr2 243960716 243960856 -6726998 + LTR33A LTR ERVL 65 217 -306 279 66 16 33 chr2 243961112 243961173 -6726681 + (TTTG)n Simple_repeat Simple_repeat 2 61 0 2244 95 3 0 chr2 243961176 243961461 -6726393 - AluSx SINE Alu -26 286 1 1987 173 3 0 chr2 243961796 243962120 -6725734 + MLT1A1 LTR MaLR 41 365 0 555 289 138 0 chr2 243963004 243963308 -6724546 + L2 LINE L2 2807 3152 -161 1665 199 85 15 chr2 243963365 243963706 -6724148 - MLT1A1 LTR MaLR 0 365 1 450 284 45 0 chr2 243963790 243963945 -6723909 + L1MC5 LINE L1 5670 5831 -1977 2086 136 19 50 chr2 243964041 243964417 -6723437 + THE1B LTR MaLR 1 364 0 10447 113 53 3 chr2 243964417 243965921 -6721933 + THE1B-int LTR MaLR 1 1580 0 1672 125 134 41 chr2 243965921 243966264 -6721590 + THE1C LTR MaLR 1 375 0 223 137 39 0 chr2 243966669 243966720 -6721134 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 685 258 60 28 chr2 243966843 243967020 -6720834 + L1MC5 LINE L1 6448 6618 -1225 2267 114 0 3 chr2 243967020 243967317 -6720537 - AluSx SINE Alu -16 296 1 685 258 60 28 chr2 243967317 243967511 -6720343 + L1MC5 LINE L1 6618 6830 -1013 598 290 109 47 chr2 243967870 243968220 -6719634 + L2 LINE L2 2262 2652 -662 5404 108 17 5 chr2 243968220 243968990 -6718864 - MER4E LTR ERV1 0 779 1 598 290 109 47 chr2 243968990 243969125 -6718729 + L2 LINE L2 2652 2777 -537 1011 112 0 8 chr2 243969132 243969266 -6718588 + AluSg1 SINE Alu 1 133 -176 2146 121 0 0 chr2 243969267 243969582 -6718272 + AluY SINE Alu 1 311 0 394 101 159 0 chr2 243969930 243969999 -6717855 - MADE1 DNA Mariner 0 80 1 251 223 173 50 chr2 243970002 243970141 -6717713 + L2 LINE L2 3158 3313 0 1910 159 0 0 chr2 243970253 243970548 -6717306 - AluSx SINE Alu -17 295 1 277 350 83 0 chr2 243971686 243971806 -6716048 - MIR SINE MIR -64 198 69 2128 108 3 38 chr2 243972650 243972966 -6714888 + AluSq SINE Alu 1 305 -8 392 254 49 56 chr2 243973850 243973992 -6713862 - L2 LINE L2 -5 3267 3127 340 246 58 29 chr2 243974170 243974405 -6713449 + (ATGTG)n Simple_repeat Simple_repeat 1 241 0 331 200 35 87 chr2 243974851 243974966 -6712888 + L2 LINE L2 3205 3313 0 21 36 0 0 chr2 243975199 243975227 -6712627 + AT_rich Low_complexity Low_complexity 1 28 0 1914 198 45 59 chr2 243975776 243976156 -6711698 - MLT1D LTR MaLR -3 502 129 2346 144 40 9 chr2 243976156 243976578 -6711276 + LTR23 LTR ERV1 1 435 -2 1914 198 45 59 chr2 243976578 243976706 -6711148 - MLT1D LTR MaLR -376 129 1 544 222 55 94 chr2 243978257 243978532 -6709322 + MER4C LTR ERV1 1 264 -201 * 841 237 108 47 chr2 243978506 243978784 -6709070 + MER4C LTR ERV1 168 462 -3 566 201 17 11 chr2 243979333 243979507 -6708347 + (CCA)n Simple_repeat Simple_repeat 1 175 0 808 190 4 12 chr2 243979530 243979790 -6708064 + (CCA)n Simple_repeat Simple_repeat 1 258 0 343 263 111 0 chr2 243979802 243979901 -6707953 + MLT2E LTR ERVL 32 141 -487 339 244 58 90 chr2 243979878 243980034 -6707820 + MLT1H LTR MaLR 157 307 -242 * 1801 131 173 0 chr2 243981447 243981759 -6706095 + MER47A DNA MER2_type 1 366 0 281 176 0 59 chr2 243982870 243982929 -6704925 - MLT1E1 LTR MaLR -4 650 594 3253 211 17 9 chr2 243982929 243983577 -6704277 - MER82 DNA MER2_type 0 653 1 583 121 0 0 chr2 243983703 243983786 -6704068 - AluS SINE Alu -228 84 2 207 88 0 0 chr2 243983799 243983833 -6704021 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 6678 61 9 61 chr2 243983833 243985098 -6702756 - SVA Other Other -915 1363 205 367 248 75 37 chr2 243985666 243985880 -6701974 + L1MEd LINE L1 892 1113 -5006 375 330 76 31 chr2 243985924 243986212 -6701642 + HAL1 LINE L1 1304 1604 -903 192 111 0 0 chr2 243986274 243986310 -6701544 + (TAAAAA)n Simple_repeat Simple_repeat 5 40 0 68 84 0 0 chr2 243986311 243986477 -6701377 + AT_rich Low_complexity Low_complexity 1 166 0 451 194 75 0 chr2 243988027 243988120 -6699734 + MER63 DNA MER1_type 1 726 -110 1153 153 0 0 chr2 243988121 243988297 -6699557 + AluJb SINE Alu 137 312 0 21 0 0 0 chr2 243988462 243988483 -6699371 + AT_rich Low_complexity Low_complexity 1 21 0 30 27 0 0 chr2 243989104 243989141 -6698713 + AT_rich Low_complexity Low_complexity 1 37 0 186 216 0 0 chr2 243990098 243990135 -6697719 - L3b LINE CR1 -8 1575 1539 4481 153 75 8 chr2 243990424 243991196 -6696658 - LTR1B LTR ERV1 -2 824 1 318 50 0 0 chr2 243991374 243991414 -6696440 + (TA)n Simple_repeat Simple_repeat 1 40 0 2245 81 3 0 chr2 243992034 243992329 -6695525 + AluSx SINE Alu 1 296 -16 2251 189 16 36 chr2 243992436 243992881 -6694973 + MLT2B3 LTR ERVL 71 506 -48 2113 121 0 0 chr2 243992980 243993277 -6694577 + AluSx SINE Alu 1 297 -15 492 320 118 13 chr2 243993278 243993506 -6694348 + L2 LINE L2 2155 2406 -908 189 269 26 51 chr2 243993568 243993646 -6694208 - L2 LINE L2 -103 3210 3135 311 323 113 5 chr2 243993788 243993983 -6693871 - L2 LINE L2 -264 3049 2834 405 267 2 11 chr2 243994003 243994117 -6693737 - MLT1I LTR MaLR 0 409 317 513 302 37 5 chr2 243994117 243994306 -6693548 - MLT1I LTR MaLR -213 196 2 298 324 45 72 chr2 243994314 243994536 -6693318 - L2 LINE L2 -528 2786 2571 230 221 29 96 chr2 243995019 243995123 -6692731 + L2 LINE L2 2985 3081 -191 318 242 22 0 chr2 243995184 243995275 -6692579 + (TG)n Simple_repeat Simple_repeat 2 94 0 364 318 56 0 chr2 243995296 243995403 -6692451 + L2 LINE L2 3160 3272 0 920 149 13 7 chr2 243996276 243996430 -6691424 - MLT1A2 LTR MaLR -211 163 9 1754 120 34 0 chr2 243996529 243996796 -6691058 - AluSx SINE Alu 0 312 37 366 323 0 0 chr2 243996803 243996816 -6691038 - L1MA10 LINE L1 -1 6333 6321 2671 242 38 23 chr2 243996816 243997556 -6690298 - L1ME1 LINE L1 -5 6161 5411 2012 121 0 7 chr2 243997923 243998228 -6689626 + AluSg SINE Alu 1 303 -7 220 272 213 43 chr2 243998441 243998676 -6689178 - L2 LINE L2 -95 3177 2903 2147 93 43 0 chr2 243999083 243999384 -6688470 + LTR10C LTR ERV1 278 591 0 1245 150 21 8 chr2 243999384 243999618 -6688236 + L1PB3 LINE L1 5917 6153 -1 246 207 49 0 chr2 243999751 243999833 -6688021 + GA-rich Low_complexity Low_complexity 4 89 0 225 0 0 0 chr2 244002204 244002229 -6685625 + (CA)n Simple_repeat Simple_repeat 2 26 0 420 284 14 28 chr2 244002229 244002370 -6685484 - MER103 DNA DNA -3 163 25 951 212 33 0 chr2 244002944 244003128 -6684726 - MER58A DNA MER1_type -31 193 4 188 282 259 0 chr2 244003267 244003352 -6684502 - MIR SINE MIR -44 218 112 427 283 9 0 chr2 244003514 244003627 -6684227 - MIR SINE MIR -100 162 49 276 100 0 0 chr2 244004253 244004293 -6683561 + (GA)n Simple_repeat Simple_repeat 1 40 0 362 219 73 101 chr2 244004363 244004541 -6683313 - MLT1I LTR MaLR 0 409 237 251 235 0 0 chr2 244004594 244004645 -6683209 - MLT1I LTR MaLR -279 130 80 279 303 86 23 chr2 244004913 244005088 -6682766 + L2 LINE L2 2594 2779 -535 273 278 33 89 chr2 244005076 244005256 -6682598 - MIR SINE MIR 0 262 93 * 2422 189 50 33 chr2 244005295 244005813 -6682041 + MLT1F LTR MaLR 5 531 -11 630 190 109 162 chr2 244005922 244006206 -6681648 - MLT1E LTR MaLR -80 513 220 3410 120 33 6 chr2 244006217 244006701 -6681153 - MER1A DNA MER1_type -23 506 10 472 175 68 19 chr2 244006713 244006816 -6681038 - MLT1E LTR MaLR -429 164 57 256 288 14 27 chr2 244008178 244008251 -6679603 + MIR3 SINE MIR 123 194 -14 248 309 27 55 chr2 244008315 244008425 -6679429 - MER5A DNA MER1_type -38 151 45 * 409 309 32 16 chr2 244008331 244008454 -6679400 + MER5A DNA MER1_type 65 189 0 3299 114 14 43 chr2 244009421 244009930 -6677924 + MER41E LTR ERV1 18 511 -1 185 91 0 30 chr2 244010053 244010086 -6677768 + (TTTTG)n Simple_repeat Simple_repeat 5 36 0 216 0 0 0 chr2 244010200 244010224 -6677630 + (T)n Simple_repeat Simple_repeat 1 24 0 873 203 176 0 chr2 244011897 244012084 -6675770 - MER58A DNA MER1_type -4 220 1 678 267 11 17 chr2 244016100 244016280 -6671574 - L2 LINE L2 -432 2882 2704 506 354 108 0 chr2 244016332 244016527 -6671327 - MIR SINE MIR -8 254 39 2553 130 45 0 chr2 244016577 244016977 -6670877 + L1MA7 LINE L1 5376 5793 -498 256 256 0 0 chr2 244016970 244017060 -6670794 - L1MC4 LINE L1 -1339 6703 6614 * 237 223 0 43 chr2 244016976 244017070 -6670784 + L1MC4 LINE L1 6614 6703 -1339 * 417 161 92 31 chr2 244017095 244017225 -6670629 + L1MA7 LINE L1 5782 5919 -372 2130 86 0 0 chr2 244019005 244019284 -6668570 + AluSg SINE Alu 27 305 -5 403 279 82 0 chr2 244019416 244019563 -6668291 - LTR1B LTR ERV1 -667 159 1 225 0 0 0 chr2 244019757 244019782 -6668072 + (TA)n Simple_repeat Simple_repeat 2 26 0 22 56 0 0 chr2 244019879 244019915 -6667939 + AT_rich Low_complexity Low_complexity 1 36 0 638 257 80 69 chr2 244020459 244020603 -6667251 + L1MCc LINE L1 24 165 -6258 1559 155 16 40 chr2 244020603 244020849 -6667005 + L1MB5 LINE L1 5878 6117 -57 1982 126 13 10 chr2 244020849 244021159 -6666695 - AluSq SINE Alu -2 311 1 1559 155 16 40 chr2 244021159 244021215 -6666639 + L1MB5 LINE L1 6117 6173 -1 638 257 80 69 chr2 244021215 244021506 -6666348 + L1MCc LINE L1 165 464 -5959 1615 223 48 12 chr2 244021592 244022073 -6665781 + L1M4 LINE L1 2804 3301 -2845 370 269 36 83 chr2 244022145 244022338 -6665516 - MLT1K LTR MaLR -324 264 81 2622 98 19 3 chr2 244023975 244024344 -6663510 - THE1C LTR MaLR 0 375 1 411 367 68 23 chr2 244024773 244025228 -6662626 - HAL1b LINE L1 -857 1250 63 1860 136 40 10 chr2 244025473 244025774 -6662080 - MER51B LTR ERV1 0 377 68 416 167 76 16 chr2 244025782 244025855 -6661999 - MER51A LTR ERV1 -224 153 86 182 36 0 36 chr2 244025855 244025883 -6661971 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1809 116 67 0 chr2 244025885 244026153 -6661701 - AluSx SINE Alu -26 286 1 416 167 76 16 chr2 244026153 244026214 -6661640 - MER51A LTR ERV1 -291 86 1 224 301 36 12 chr2 244026711 244026794 -6661060 + L2 LINE L2 3210 3294 -19 249 333 108 0 chr2 244026991 244027102 -6660752 - MIR SINE MIR -39 223 101 299 333 147 0 chr2 244027115 244027244 -6660610 - L2 LINE L2 -1356 1958 1811 2237 113 0 0 chr2 244027253 244027563 -6660291 + AluSx SINE Alu 1 310 -2 252 253 63 44 chr2 244027582 244027740 -6660114 + L1M4 LINE L1 5182 5342 -804 494 320 0 7 chr2 244028029 244028176 -6659678 + MIR SINE MIR 63 208 -54 459 331 95 28 chr2 244028225 244028542 -6659312 - L1ME3A LINE L1 -268 5902 5565 2307 100 0 0 chr2 244028674 244028984 -6658870 - AluSg SINE Alu 0 310 1 227 303 26 0 chr2 244029710 244029786 -6658068 + MIR SINE MIR 60 137 -125 1727 59 5 0 chr2 244030317 244030539 -6657315 - LTR10C LTR ERV1 -368 223 1 2012 112 5 133 chr2 244030539 244030849 -6657005 - L1PB1 LINE L1 -231 5920 5679 657 114 49 16 chr2 244030849 244030972 -6656882 - L1PB3 LINE L1 -1 6153 6027 2012 112 5 133 chr2 244030972 244031091 -6656763 - L1PB1 LINE L1 -472 5679 5546 22 0 0 0 chr2 244031885 244031907 -6655947 + AT_rich Low_complexity Low_complexity 1 22 0 3478 101 9 74 chr2 244031920 244032571 -6655283 - MER4B LTR ERV1 0 779 2 319 272 25 0 chr2 244033527 244033608 -6654246 - MER91A DNA MER1_type -32 164 82 228 308 58 17 chr2 244033786 244033906 -6653948 + LTR67 LTR ERVL 432 556 -1 212 325 0 12 chr2 244034580 244034660 -6653194 + GA-rich Low_complexity Low_complexity 2 80 0 1328 207 8 0 chr2 244034828 244035094 -6652760 + AluJo SINE Alu 31 298 -14 590 342 75 23 chr2 244035137 244035594 -6652260 + L1M4 LINE L1 2110 2600 -3546 714 134 0 0 chr2 244035815 244035942 -6651912 + (TG)n Simple_repeat Simple_repeat 2 128 0 231 306 65 48 chr2 244036150 244036336 -6651518 + MER5A DNA MER1_type 1 189 0 2232 163 62 10 chr2 244036649 244037054 -6650800 + MSTB LTR MaLR 1 426 0 1714 160 11 3 chr2 244037863 244038169 -6649685 - AluSx SINE Alu 0 308 1 4364 222 36 25 chr2 244038657 244038909 -6648945 - L1MDb LINE L1 -4463 1943 1695 2325 77 3 3 chr2 244038909 244039220 -6648634 + AluY SINE Alu 1 311 0 4364 222 36 25 chr2 244039220 244040253 -6647601 - L1MDb LINE L1 -4711 1695 528 2250 86 123 0 chr2 244040253 244040577 -6647277 + THE1B LTR MaLR 1 364 0 4364 222 36 25 chr2 244040577 244041103 -6646751 - L1MDb LINE L1 -5878 528 9 378 272 52 0 chr2 244041365 244041501 -6646353 - MER110A LTR ERV1 0 468 326 200 280 224 0 chr2 244042238 244042345 -6645509 - MIR3 SINE MIR -15 193 63 657 305 49 30 chr2 244042820 244043125 -6644729 - L3 LINE CR1 -28 1549 1239 214 284 138 18 chr2 244043361 244043470 -6644384 + L2 LINE L2 3099 3220 -93 617 290 27 65 chr2 244043870 244044132 -6643722 + MLT1K LTR MaLR 97 348 -240 294 129 65 32 chr2 244044512 244044574 -6643280 + MER112 DNA MER1_type 8 71 -189 260 257 107 14 chr2 244044609 244044749 -6643105 - MER103 DNA DNA -2 164 12 298 297 69 0 chr2 244044774 244044875 -6642979 - L2 LINE L2 -12 3260 3153 281 257 68 0 chr2 244045045 244045119 -6642735 - MER91C DNA MER1_type -47 93 15 808 232 127 77 chr2 244045240 244045293 -6642561 - L1MC4 LINE L1 0 8042 7993 1784 110 4 4 chr2 244045293 244045556 -6642298 + AluSg SINE Alu 45 307 -3 808 232 127 77 chr2 244045556 244046037 -6641817 - L1MC4 LINE L1 -49 7993 7481 217 355 110 18 chr2 244046483 244046711 -6641143 - L2 LINE L2 -177 3095 2847 321 348 24 40 chr2 244046845 244047095 -6640759 - L2 LINE L2 -577 2737 2492 626 201 122 140 chr2 244047311 244047404 -6640450 + L1MD2 LINE L1 6035 6128 -231 270 0 0 0 chr2 244047404 244047434 -6640420 + (CA)n Simple_repeat Simple_repeat 1 30 0 626 201 122 140 chr2 244047434 244047669 -6640185 + L1MD2 LINE L1 6128 6357 -2 1895 106 50 17 chr2 244048215 244048517 -6639337 + AluJb SINE Alu 1 312 0 238 92 79 26 chr2 244049183 244049259 -6638595 + (TTATA)n Simple_repeat Simple_repeat 4 83 0 27 0 0 26 chr2 244049518 244049530 -6638324 + AT_rich Low_complexity Low_complexity 1 12 -25 2126 90 0 3 chr2 244049530 244049820 -6638034 + AluSq SINE Alu 1 289 -24 27 0 0 26 chr2 244049820 244049845 -6638009 + AT_rich Low_complexity Low_complexity 12 37 0 294 217 87 0 chr2 244050226 244050295 -6637559 + MIR SINE MIR 72 146 -116 2273 159 14 33 chr2 244051292 244051719 -6636135 + L1PA16 LINE L1 5729 6147 -19 332 275 33 22 chr2 244051807 244051898 -6635956 - L3 LINE CR1 -4 1573 1482 1409 140 13 0 chr2 244052704 244052932 -6634922 - L1PA14 LINE L1 -1 6160 5930 532 302 90 5 chr2 244053259 244053471 -6634383 + MIR SINE MIR 24 253 -9 357 258 52 142 chr2 244053673 244054153 -6633701 + L2 LINE L2 2835 3271 -1 198 254 109 0 chr2 244054174 244054229 -6633625 - L3 LINE CR1 -504 1073 1013 261 0 0 0 chr2 244054766 244054795 -6633059 + (CA)n Simple_repeat Simple_repeat 1 29 0 2045 101 4 0 chr2 244055175 244055451 -6632403 + AluSx SINE Alu 3 279 -33 1099 124 0 13 chr2 244056366 244056676 -6631178 + (TTCC)n Simple_repeat Simple_repeat 1 305 0 244 336 109 8 chr2 244057170 244057298 -6630556 + L2 LINE L2 3167 3307 -6 33 0 0 42 chr2 244059078 244059111 -6628743 + AT_rich Low_complexity Low_complexity 1 33 -13 317 73 73 0 chr2 244059111 244059166 -6628688 - L1MA8 LINE L1 -5 6286 6228 33 0 0 42 chr2 244059166 244059180 -6628674 + AT_rich Low_complexity Low_complexity 33 46 0 1473 179 28 52 chr2 244059203 244059313 -6628541 + AluJo SINE Alu 5 116 -186 1896 124 3 3 chr2 244059313 244059623 -6628231 + AluSx SINE Alu 1 310 0 1473 179 28 52 chr2 244059623 244059801 -6628053 + AluJo SINE Alu 116 287 -15 2105 157 22 21 chr2 244059826 244060283 -6627571 - L1MA7 LINE L1 -29 6262 5841 561 181 0 0 chr2 244060367 244060500 -6627354 + C-rich Low_complexity Low_complexity 1 133 0 366 209 0 0 chr2 244060524 244060658 -6627196 + C-rich Low_complexity Low_complexity 1 134 0 225 207 110 35 chr2 244060811 244060956 -6626898 - L1M4 LINE L1 -907 5239 5084 1465 325 56 44 chr2 244061057 244061256 -6626598 - HERV16 LTR ERVL -2025 2971 2776 1989 122 3 13 chr2 244061256 244061567 -6626287 - AluSq SINE Alu -5 308 1 1465 325 56 44 chr2 244061567 244062169 -6625685 - HERV16 LTR ERVL -2220 2776 2196 297 284 91 51 chr2 244062274 244062471 -6625383 - HERV16 LTR ERVL -3750 2014 1810 1772 313 59 8 chr2 244062563 244063275 -6624579 - HERV16 LTR ERVL -3420 1576 829 684 303 63 61 chr2 244063475 244064033 -6623821 - L1MEc LINE L1 -5816 580 22 296 200 0 15 chr2 244064041 244064106 -6623748 - L1M4 LINE L1 -1803 4343 4280 883 182 0 33 chr2 244064107 244064288 -6623566 - AluJb SINE Alu -14 298 124 920 293 86 47 chr2 244064288 244064454 -6623400 - L1M4 LINE L1 -1875 4271 4113 5259 60 11 49 chr2 244064454 244065172 -6622682 - LTR8 LTR ERV1 0 691 1 920 293 86 47 chr2 244065172 244065823 -6622031 - L1M4 LINE L1 -2033 4113 3422 208 161 16 65 chr2 244066231 244066293 -6621561 + T-rich Low_complexity Low_complexity 2 60 0 255 301 133 41 chr2 244066350 244067496 -6620358 - L1M4 LINE L1 -2752 3394 2144 237 65 0 0 chr2 244067850 244067881 -6619973 + (CA)n Simple_repeat Simple_repeat 2 32 0 428 283 60 16 chr2 244068090 244068274 -6619580 - LTR67 LTR ERVL -8 549 358 2219 176 16 69 chr2 244068361 244068866 -6618988 - L1MC3 LINE L1 -606 7179 6702 2347 121 19 38 chr2 244069053 244069424 -6618430 - THE1B LTR MaLR 0 364 1 323 294 20 20 chr2 244070788 244070890 -6616964 + MER5B DNA MER1_type 4 105 -73 557 240 40 8 chr2 244070900 244071025 -6616829 + MER91A DNA MER1_type 1 129 -67 2316 100 0 0 chr2 244071763 244072072 -6615782 - AluSx SINE Alu -3 309 1 210 120 27 53 chr2 244072372 244072447 -6615407 + GA-rich Low_complexity Low_complexity 1 73 0 2221 68 14 7 chr2 244072450 244072743 -6615111 - AluSg1 SINE Alu -14 295 1 2121 122 0 0 chr2 244073157 244073460 -6614394 - AluSx SINE Alu -9 303 1 278 317 30 20 chr2 244073674 244073775 -6614079 - L2 LINE L2 -23 3249 3148 453 229 37 0 chr2 244074491 244074600 -6613254 + MER81 DNA DNA 1 113 -1 266 353 69 18 chr2 244075381 244075599 -6612255 - L2 LINE L2 -1031 2283 2055 1393 165 0 39 chr2 244075662 244075922 -6611932 - AluJb SINE Alu -50 262 13 233 310 161 11 chr2 244076416 244076503 -6611351 - L2 LINE L2 -4 3268 3169 2364 75 0 3 chr2 244076868 244077174 -6610680 + AluY SINE Alu 1 305 -6 310 278 82 113 chr2 244078312 244078592 -6609262 + L1M2 LINE L1 1686 1825 -1384 1494 167 28 44 chr2 244078592 244078909 -6608945 + AluJo SINE Alu 1 312 0 310 278 82 113 chr2 244078909 244079084 -6608770 + L1M2 LINE L1 1825 2004 -1205 7032 120 15 22 chr2 244080073 244081152 -6606702 - MER11C LTR ERVK 0 1071 1 918 266 28 0 chr2 244081836 244082054 -6605800 + MER58A DNA MER1_type 1 224 0 521 296 114 29 chr2 244082087 244082395 -6605459 - LTR16C LTR ERVL -47 444 111 264 350 113 30 chr2 244082717 244082983 -6604871 + L2 LINE L2 3026 3313 0 1783 41 0 9 chr2 244083716 244083935 -6603919 - AluY SINE Alu -9 302 86 2022 139 7 0 chr2 244084209 244084518 -6603336 - AluSx SINE Alu -1 311 1 1318 191 62 19 chr2 244085042 244085418 -6602436 - L1MDa LINE L1 -3661 2879 2484 220 284 194 45 chr2 244085436 244085570 -6602284 - MIR SINE MIR -40 222 69 1828 143 190 14 chr2 244085570 244085934 -6601920 + MSTA LTR MaLR 1 428 0 463 274 117 51 chr2 244086202 244086614 -6601240 - LTR37B LTR ERV1 -24 444 6 1558 115 0 17 chr2 244087018 244087252 -6600602 + MER30 DNA MER1_type 1 230 0 2563 158 32 23 chr2 244087675 244088150 -6599704 - LTR8A LTR ERV1 0 727 249 587 177 0 0 chr2 244088148 244088244 -6599610 - LTR8A LTR ERV1 -383 344 249 * 1727 165 95 6 chr2 244088242 244088558 -6599296 - LTR8A LTR ERV1 -383 344 1 2055 122 3 0 chr2 244089929 244090225 -6597629 - AluJb SINE Alu -15 297 1 407 254 65 22 chr2 244090352 244090490 -6597364 - MLT1K LTR MaLR -342 246 103 2148 125 0 0 chr2 244090828 244091133 -6596721 + AluSx SINE Alu 1 305 -7 1851 107 0 4 chr2 244091605 244091858 -6595996 + AluSc SINE Alu 1 252 -57 200 59 29 0 chr2 244091872 244091906 -6595948 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3124 209 185 31 chr2 244091923 244092857 -6594997 + L1MDa LINE L1 22 1121 -5419 2365 84 3 0 chr2 244092857 244093166 -6594688 + AluSx SINE Alu 3 312 0 3124 209 185 31 chr2 244093166 244093229 -6594625 + L1MDa LINE L1 1121 1173 -5367 2347 184 28 78 chr2 244093227 244093698 -6594156 + L1MD1 LINE L1 5475 5968 -274 * 1827 147 19 7 chr2 244093698 244094005 -6593849 - AluJb SINE Alu -1 311 1 2347 184 28 78 chr2 244094005 244094038 -6593816 + L1MD1 LINE L1 5968 5950 -292 4504 138 31 30 chr2 244094038 244094816 -6593038 + MER4E LTR ERV1 1 779 0 2347 184 28 78 chr2 244094816 244094886 -6592968 + L1MD1 LINE L1 5949 6021 -221 242 294 0 40 chr2 244094903 244095080 -6592774 + GA-rich Low_complexity Low_complexity 4 173 0 * 255 296 17 40 chr2 244095076 244095252 -6592602 + (CAG)n Simple_repeat Simple_repeat 3 174 0 276 211 33 39 chr2 244095261 244095441 -6592413 + GA-rich Low_complexity Low_complexity 1 179 0 200 304 19 43 chr2 244095441 244095602 -6592252 + (CAG)n Simple_repeat Simple_repeat 3 159 0 220 217 23 51 chr2 244095726 244095901 -6591953 + GA-rich Low_complexity Low_complexity 4 173 0 * 238 294 19 38 chr2 244095808 244095968 -6591886 + (CAG)n Simple_repeat Simple_repeat 3 159 0 245 233 34 34 chr2 244096157 244096333 -6591521 + GA-rich Low_complexity Low_complexity 4 179 0 1147 202 21 4 chr2 244096397 244096640 -6591214 + L1MD1 LINE L1 5988 6234 -8 203 299 140 9 chr2 244096886 244096993 -6590861 + MIR SINE MIR 69 189 -73 392 325 63 37 chr2 244097130 244097389 -6590465 - L1M4c LINE L1 -4207 2356 2105 2008 133 0 0 chr2 244097389 244097675 -6590179 - AluSx SINE Alu -26 286 1 392 325 63 37 chr2 244097675 244097866 -6589988 - L1M4c LINE L1 -4458 2105 1921 738 195 0 0 chr2 244097866 244097994 -6589860 - FLAM_A SINE Alu -1 132 5 392 325 63 37 chr2 244097994 244098219 -6589635 - L1M4c LINE L1 -4642 1921 1516 255 61 0 0 chr2 244098285 244098318 -6589536 + (CA)n Simple_repeat Simple_repeat 2 34 0 1893 98 0 66 chr2 244099034 244099369 -6588485 - AluSx SINE Alu 0 315 1 2050 147 0 0 chr2 244099636 244099948 -6587906 - AluSx SINE Alu 0 312 1 250 305 55 49 chr2 244100211 244100385 -6587469 + MIR SINE MIR 17 202 -60 378 331 38 6 chr2 244100902 244101062 -6586792 + L2 LINE L2 1851 2015 -1299 1848 134 10 3 chr2 244101203 244101495 -6586359 + AluJo SINE Alu 2 295 -17 2084 132 0 0 chr2 244101697 244102000 -6585854 + AluSx SINE Alu 3 305 -7 340 383 155 4 chr2 244103019 244103283 -6584571 - L3 LINE CR1 -2 1575 1272 312 250 20 115 chr2 244103294 244103538 -6584316 - LTR41 LTR ERVL -22 751 531 2412 74 3 0 chr2 244103581 244103890 -6583964 + AluY SINE Alu 1 310 -1 2276 127 39 14 chr2 244104032 244104387 -6583467 - THE1B LTR MaLR 0 364 1 10602 107 50 6 chr2 244104387 244105901 -6581953 - THE1B-int LTR MaLR 0 1580 1 2211 134 40 3 chr2 244105902 244106252 -6581602 - THE1B LTR MaLR -1 363 1 452 244 0 39 chr2 244106310 244106437 -6581417 - LTR41 LTR ERVL -628 145 24 188 325 16 63 chr2 244106700 244106826 -6581028 + L2 LINE L2 2227 2346 -968 1536 132 0 0 chr2 244107266 244107486 -6580368 + AluSq SINE Alu 1 220 -93 225 297 62 62 chr2 244108231 244108376 -6579478 + MIR SINE MIR 48 192 -70 3844 99 6 88 chr2 244108534 244109171 -6578683 + MER4A LTR ERV1 1 585 -79 2730 176 86 2 chr2 244109456 244109980 -6577874 - L1MB5 LINE L1 -8 6166 5599 2395 74 0 3 chr2 244110966 244111277 -6576577 + AluY SINE Alu 1 310 -1 26 30 0 0 chr2 244111361 244111394 -6576460 + AT_rich Low_complexity Low_complexity 1 33 0 204 43 64 64 chr2 244111547 244111594 -6576260 + (TTATA)n Simple_repeat Simple_repeat 1 47 0 411 279 137 11 chr2 244111594 244111784 -6576070 - L1ME LINE L1 -395 5726 5513 399 304 84 59 chr2 244111993 244112434 -6575420 - L1ME LINE L1 -822 5324 4873 573 249 96 0 chr2 244112537 244112766 -6575088 + MER90 LTR ERV1 1 251 -324 3231 176 14 61 chr2 244114065 244114787 -6573067 + LTR8 LTR ERV1 1 688 -3 296 290 107 47 chr2 244114906 244115075 -6572779 + LTR16C LTR ERVL 313 491 0 2273 103 0 3 chr2 244116696 244117008 -6570846 + AluSq SINE Alu 1 311 -2 598 119 37 0 chr2 244117160 244117294 -6570560 + (TG)n Simple_repeat Simple_repeat 2 140 0 1966 120 0 4 chr2 244118669 244118945 -6568909 - AluSx SINE Alu -37 275 1 1463 246 135 8 chr2 244119574 244120091 -6567763 + MER90 LTR ERV1 31 613 -1 183 80 0 0 chr2 244120481 244120506 -6567348 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 718 169 39 23 chr2 244120621 244120751 -6567103 + FLAM_C SINE Alu 1 132 -1 2096 142 38 11 chr2 244120839 244121002 -6566852 + L1MA9 LINE L1 5932 6089 -223 2846 120 16 12 chr2 244121002 244121428 -6566426 + MSTA LTR MaLR 1 428 0 2096 142 38 11 chr2 244121428 244121630 -6566224 + L1MA9 LINE L1 6089 6307 -5 291 386 51 0 chr2 244123716 244123874 -6563980 + MIR SINE MIR 1 166 -96 1974 136 10 0 chr2 244123962 244124256 -6563598 + AluSx SINE Alu 1 297 -15 192 316 118 37 chr2 244124436 244124572 -6563282 - L2 LINE L2 -2 3311 3165 243 251 31 80 chr2 244124691 244124854 -6563000 - L1ME LINE L1 -343 5778 5624 234 240 10 42 chr2 244124942 244125038 -6562816 - L1ME LINE L1 -681 5440 5348 195 402 0 11 chr2 244125419 244125511 -6562343 - MER5B DNA MER1_type -85 93 3 322 314 108 15 chr2 244125514 244125718 -6562136 + L3 LINE CR1 790 1012 -565 472 353 6 12 chr2 244125766 244125936 -6561918 + L3 LINE CR1 1319 1487 -90 2305 97 0 3 chr2 244125996 244126306 -6561548 - AluSg SINE Alu -1 309 1 183 326 0 0 chr2 244126428 244126477 -6561377 - L3 LINE CR1 -1317 260 212 2249 89 7 0 chr2 244127171 244127475 -6560379 + AluSp SINE Alu 5 310 -3 1791 203 34 47 chr2 244127685 244128154 -6559700 + MLT1C LTR MaLR 5 467 0 492 321 72 28 chr2 244130467 244130856 -6556998 - MLT1I LTR MaLR -3 406 1 211 361 0 0 chr2 244130982 244131043 -6556811 - L2 LINE L2 -58 3214 3154 1060 159 0 0 chr2 244131140 244131310 -6556544 - AluSg/x SINE Alu -8 304 135 693 178 0 0 chr2 244131522 244131679 -6556175 + (TG)n Simple_repeat Simple_repeat 2 158 0 246 177 16 32 chr2 244331705 244331767 -6356087 + GA-rich Low_complexity Low_complexity 2 62 0 327 164 66 0 chr2 244332179 244332240 -6355614 + MLT1K LTR MaLR 511 575 -13 2261 90 0 0 chr2 244332966 244333265 -6354589 - AluY SINE Alu -12 299 1 197 194 0 0 chr2 244333356 244333392 -6354462 - L3 LINE CR1 -14 1563 1528 997 114 0 0 chr2 244333463 244333595 -6354259 + MER83 LTR ERV1 1 132 -316 201 211 92 55 chr2 244333698 244333807 -6354047 + MER5A DNA MER1_type 26 138 -51 271 253 38 0 chr2 244333713 244333792 -6354062 - MER5B DNA MER1_type -33 145 64 213 240 40 0 chr2 244333846 244333896 -6353958 + MER5B DNA MER1_type 127 178 0 660 217 64 6 chr2 244334000 244334157 -6353697 - MER5A DNA MER1_type -23 166 1 294 358 40 11 chr2 244334160 244334336 -6353518 + MIR SINE MIR 12 192 -70 2346 76 0 0 chr2 244334603 244334904 -6352950 - AluSc SINE Alu -8 301 1 904 217 42 0 chr2 244336181 244336370 -6351484 + MIR SINE MIR 40 236 -26 2024 87 7 18 chr2 244336479 244336765 -6351089 - L1P5 LINE L1 -473 5678 5396 735 143 134 78 chr2 244336765 244336982 -6350872 - MLT1C LTR MaLR -233 234 6 261 250 66 0 chr2 244338639 244338715 -6349139 + MER5B DNA MER1_type 2 82 -96 244 275 12 0 chr2 244339235 244339315 -6348539 - L1ME LINE L1 -201 5920 5840 865 169 68 34 chr2 244339320 244339497 -6348357 - AluJo SINE Alu -22 290 108 580 273 7 26 chr2 244339511 244339665 -6348189 + MIR SINE MIR 33 183 -79 253 280 110 0 chr2 244339730 244339848 -6348006 - L1ME LINE L1 -295 5826 5696 629 167 9 0 chr2 244339850 244339958 -6347896 - AluSg/x SINE Alu -12 298 190 2184 103 0 0 chr2 244340087 244340388 -6347466 - AluSc SINE Alu 0 309 9 542 233 17 9 chr2 244341322 244341438 -6346416 + MER58A DNA MER1_type 3 119 0 3345 108 54 39 chr2 244343060 244343579 -6344275 - MER1A DNA MER1_type 0 527 1 332 312 18 0 chr2 244343590 244343699 -6344155 + MIR SINE MIR 21 131 -131 23 0 0 0 chr2 244346276 244346299 -6341555 + AT_rich Low_complexity Low_complexity 1 23 0 279 173 0 0 chr2 244346351 244346403 -6341451 + (TG)n Simple_repeat Simple_repeat 1 52 0 434 249 140 21 chr2 244346692 244346885 -6340969 + MIR SINE MIR 45 260 -2 245 280 105 21 chr2 244346907 244347050 -6340804 + MIR3 SINE MIR 5 159 -49 4246 72 24 0 chr2 244348114 244348655 -6339199 - MER41A LTR ERV1 0 554 1 371 274 230 28 chr2 244349257 244349614 -6338240 + L2 LINE L2 2861 3289 -24 1589 184 7 7 chr2 244349646 244349945 -6337909 + AluJb SINE Alu 13 311 -1 558 158 234 6 chr2 244349952 244350110 -6337744 - MLT1D LTR MaLR -2 503 310 317 343 101 0 chr2 244350749 244350927 -6336927 + L2 LINE L2 3118 3313 0 2048 114 0 32 chr2 244351359 244351667 -6336187 - AluSq SINE Alu -15 298 1 1036 135 104 40 chr2 244351958 244352180 -6335674 - L1MA9 LINE L1 0 6312 6077 1045 139 0 6 chr2 244352180 244352338 -6335516 + THE1C LTR MaLR 1 157 -218 234 0 0 0 chr2 244352439 244352465 -6335389 + (CA)n Simple_repeat Simple_repeat 1 26 0 2867 64 3 0 chr2 244352466 244352823 -6335031 + L1PB1 LINE L1 5793 6150 -1 544 205 340 5 chr2 244352855 244353040 -6334814 + MLT1C LTR MaLR 221 467 0 191 183 0 155 chr2 244353979 244354009 -6333845 - MIR3 SINE MIR -15 193 179 2016 105 35 0 chr2 244354009 244354295 -6333559 + AluSc SINE Alu 1 296 -13 191 183 0 155 chr2 244354295 244354335 -6333519 - MIR3 SINE MIR -29 179 134 353 64 0 3 chr2 244354405 244354454 -6333400 - MLT2A2 LTR ERVL -4 449 408 * 3438 69 0 20 chr2 244354452 244354899 -6332955 - MLT2A1 LTR ERVL -6 438 1 551 218 160 75 chr2 244354971 244355233 -6332621 + MLT1H1 LTR MaLR 1 298 -257 2108 181 71 5 chr2 244355233 244355625 -6332229 + MER47B DNA MER2_type 1 418 0 551 218 160 75 chr2 244355625 244355693 -6332161 + MLT1H1 LTR MaLR 298 359 -196 254 154 0 0 chr2 244355719 244355758 -6332096 + MLT1H1 LTR MaLR 552 590 0 190 300 0 0 chr2 244355779 244355819 -6332035 - L3 LINE CR1 -6 1571 1532 499 310 118 0 chr2 244355822 244356009 -6331845 - L2 LINE L2 -5 3308 3100 438 193 0 0 chr2 244356037 244356120 -6331734 - AluJ/FRAM SINE Alu 0 312 230 24 0 0 0 chr2 244356120 244356144 -6331710 + AT_rich Low_complexity Low_complexity 1 24 0 1976 129 4 0 chr2 244356284 244356611 -6331243 - AluSg SINE Alu 0 328 1 967 293 147 46 chr2 244356739 244357479 -6330375 - L3 LINE CR1 -72 1505 691 2025 127 0 13 chr2 244357594 244357893 -6329961 + AluSx SINE Alu 1 295 -17 2498 138 5 0 chr2 244358211 244358595 -6329259 + MLT1B LTR MaLR 5 390 0 3064 127 172 2 chr2 244359034 244359562 -6328292 - LTR35 LTR ERV1 0 618 1 4571 49 2 0 chr2 244360076 244360628 -6327226 + L1PA5 LINE L1 5602 6154 0 443 143 24 0 chr2 244361160 244361244 -6326610 - L1MB8 LINE L1 0 6178 6093 234 268 28 14 chr2 244361730 244361801 -6326053 + GA-rich Low_complexity Low_complexity 5 76 0 1990 134 74 0 chr2 244361966 244362302 -6325552 + MER46B DNA MER2_type 1 236 0 2034 189 70 7 chr2 244362799 244363202 -6324652 - MSTA LTR MaLR 0 428 1 501 287 46 35 chr2 244363449 244363623 -6324231 - MER45A DNA AcHobo -2 176 1 224 149 21 0 chr2 244365234 244365281 -6322573 + GA-rich Low_complexity Low_complexity 2 49 0 9411 85 1 9 chr2 244365680 244366741 -6321113 - L1P LINE L1 -1198 4948 3898 2814 22 0 0 chr2 244366741 244367059 -6320795 - AluYb8 SINE Alu 0 318 1 9411 85 1 9 chr2 244367059 244367284 -6320570 - L1P LINE L1 -2248 3898 3673 1935 145 6 42 chr2 244367284 244367616 -6320238 + MER57B LTR ERV1 88 407 -27 367 287 64 32 chr2 244367635 244367792 -6320062 + MIR3 SINE MIR 47 208 0 279 350 62 44 chr2 244367809 244367969 -6319885 + L3b LINE CR1 1364 1526 -57 2006 196 48 17 chr2 244368408 244368827 -6319027 + MSTB1 LTR MaLR 1 432 0 233 70 0 70 chr2 244369212 244369269 -6318585 + (TCC)n Simple_repeat Simple_repeat 1 53 0 1121 45 0 0 chr2 244369606 244369740 -6318114 + AluY SINE Alu 1 134 -177 2246 64 14 0 chr2 244369740 244370037 -6317817 + AluY SINE Alu 1 301 -10 1890 125 4 4 chr2 244371783 244372088 -6315766 + AluSx SINE Alu 1 305 0 585 203 65 106 chr2 244372951 244373168 -6314686 - MER63A DNA MER1_type -2 208 1 2395 110 8 8 chr2 244373468 244373823 -6314031 - THE1A LTR MaLR 0 355 1 7581 37 1 1 chr2 244373846 244374998 -6312856 + L1PA5 LINE L1 5000 6151 -3 21 0 0 0 chr2 244375000 244375021 -6312833 + AT_rich Low_complexity Low_complexity 1 21 0 1088 240 41 29 chr2 244375229 244375619 -6312235 + LTR16C LTR ERVL 49 490 -1 705 226 42 52 chr2 244375884 244376172 -6311682 - L1MC5 LINE L1 -36 7925 7641 * 5932 191 20 32 chr2 244376114 244377285 -6310569 + L1MB8 LINE L1 3986 5170 -1008 1668 201 0 0 chr2 244377285 244377579 -6310275 - AluSx SINE Alu -18 294 1 5932 191 20 32 chr2 244377579 244378263 -6309591 + L1MB8 LINE L1 5170 5861 -317 1999 128 0 10 chr2 244378263 244378559 -6309295 + AluSg SINE Alu 1 293 -17 5932 191 20 32 chr2 244378559 244378864 -6308990 + L1MB8 LINE L1 5861 6118 -60 1441 94 85 0 chr2 244378864 244379076 -6308778 - MER30 DNA MER1_type 0 230 1 5932 191 20 32 chr2 244379076 244379135 -6308719 + L1MB8 LINE L1 6118 6176 -2 1273 188 59 0 chr2 244379149 244379405 -6308449 + AluJo SINE Alu 6 276 -36 486 295 7 7 chr2 244379513 244379662 -6308192 + FRAM SINE Alu 25 173 -3 1390 223 106 3 chr2 244379684 244380051 -6307803 + MLT1E2 LTR MaLR 222 626 0 1729 179 0 13 chr2 244380280 244380582 -6307272 + AluJo SINE Alu 1 298 -14 210 300 153 24 chr2 244380862 244381032 -6306822 - L2 LINE L2 -153 3119 2928 302 315 55 36 chr2 244381436 244381601 -6306253 - MIR SINE MIR -15 247 80 1999 87 7 43 chr2 244381957 244382279 -6305575 - AluSx SINE Alu 0 312 1 291 266 93 29 chr2 244382588 244382727 -6305127 - L1MC/D LINE L1 -1959 5849 5702 762 42 0 0 chr2 244382735 244382831 -6305023 + L1PA6 LINE L1 6059 6154 0 1905 147 3 39 chr2 244382891 244383198 -6304656 + AluJb SINE Alu 1 296 -16 585 324 91 37 chr2 244383231 244384068 -6303786 - L1M4 LINE L1 -2828 3318 2453 407 204 138 0 chr2 244384917 244385069 -6302785 - L1MC/D LINE L1 -2381 5427 5255 204 309 160 22 chr2 244386342 244386523 -6301331 + MIR SINE MIR 21 226 -36 27 0 0 0 chr2 244386763 244386790 -6301064 + AT_rich Low_complexity Low_complexity 1 27 0 320 366 86 18 chr2 244387105 244387384 -6300470 - L2 LINE L2 -9 3263 2966 3585 193 71 36 chr2 244387420 244388232 -6299622 - MER21B LTR ERV1 -4 859 19 1371 128 5 5 chr2 244388302 244388498 -6299356 - AluJb SINE Alu -32 280 85 1963 140 0 7 chr2 244389384 244389720 -6298134 + AluJb SINE Alu 1 334 0 2015 127 3 19 chr2 244390878 244391193 -6296661 - AluSx SINE Alu -2 310 1 257 235 0 12 chr2 244391773 244391854 -6296000 + CT-rich Low_complexity Low_complexity 3 82 0 531 256 90 13 chr2 244393206 244393362 -6294492 + MER63A DNA MER1_type 12 179 -31 546 304 117 19 chr2 244394518 244394886 -6292968 + L1ME4a LINE L1 5508 5911 -210 2065 94 30 0 chr2 244395400 244395665 -6292189 + AluSq SINE Alu 22 294 -19 231 36 0 0 chr2 244395676 244395704 -6292150 + (CAA)n Simple_repeat Simple_repeat 3 30 0 192 349 101 8 chr2 244395742 244395871 -6291983 + MIR SINE MIR 107 247 -15 32 26 0 0 chr2 244396341 244396380 -6291474 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr2 244396478 244396506 -6291348 + AT_rich Low_complexity Low_complexity 1 28 0 871 137 65 13 chr2 244396687 244396840 -6291014 + MER65B LTR ERV1 1 161 -370 33 18 0 36 chr2 244397645 244397662 -6290192 + AT_rich Low_complexity Low_complexity 1 17 -36 1716 172 21 7 chr2 244397662 244397953 -6289901 + AluJb SINE Alu 3 297 -15 33 18 0 36 chr2 244397953 244397990 -6289864 + AT_rich Low_complexity Low_complexity 17 53 0 368 288 132 58 chr2 244398281 244398760 -6289094 - LTR33 LTR ERVL 0 521 8 855 160 0 21 chr2 244398796 244398940 -6288914 + FLAM_C SINE Alu 3 143 0 745 235 90 10 chr2 244398960 244399160 -6288694 - MER20 DNA MER1_type -3 216 1 291 292 99 29 chr2 244399567 244399738 -6288116 + L1MEd LINE L1 376 558 -5561 365 151 32 167 chr2 244399797 244399877 -6287977 + L1MA9 LINE L1 5973 6032 -280 1951 103 74 4 chr2 244399877 244400148 -6287706 + AluSq SINE Alu 1 290 -23 365 151 32 167 chr2 244400148 244400193 -6287661 + L1MA9 LINE L1 6032 6081 -231 617 103 11 0 chr2 244400193 244400280 -6287574 - THE1C LTR MaLR 0 375 288 1075 116 29 77 chr2 244400384 244400504 -6287350 + MER83 LTR ERV1 252 359 -89 1811 121 0 12 chr2 244400504 244400760 -6287094 - AluSx SINE Alu -17 295 43 1075 116 29 77 chr2 244400760 244400846 -6287008 + MER83 LTR ERV1 359 448 0 23 0 0 0 chr2 244401426 244401449 -6286405 + AT_rich Low_complexity Low_complexity 1 23 0 189 74 0 0 chr2 244401505 244401532 -6286322 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 3115 104 14 0 chr2 244401948 244402370 -6285484 + MSTA LTR MaLR 1 428 0 314 300 132 47 chr2 244402827 244403084 -6284770 + LTR16A LTR ERVL 12 290 -160 342 257 40 0 chr2 244403113 244403214 -6284640 + HERV16 LTR ERVL 1220 1324 -3672 254 200 168 40 chr2 244403238 244403343 -6284511 + LTR37A LTR ERV1 8 128 -298 3047 93 114 38 chr2 244403343 244403906 -6283948 + MER4B LTR ERV1 2 766 0 408 176 37 81 chr2 244403919 244404055 -6283799 + MER57-int LTR ERV1 4604 4733 -203 2344 97 0 0 chr2 244404253 244404552 -6283302 - AluSg SINE Alu -11 299 1 264 269 45 0 chr2 244404692 244404759 -6283095 + MER57-int LTR ERV1 6898 6967 -570 536 301 88 36 chr2 244405077 244405383 -6282471 + MER93a LTR ERV1 64 385 -17 2341 112 0 6 chr2 244405834 244406148 -6281706 - AluSx SINE Alu 0 312 1 3274 219 151 88 chr2 244407328 244408963 -6278891 - L1MC4a LINE L1 -697 7111 5373 470 198 28 0 chr2 244408942 244409048 -6278806 - L1MC4a LINE L1 -1630 4516 4408 * 307 250 54 18 chr2 244409470 244409582 -6278272 - L1M4 LINE L1 -1555 4591 4476 567 116 63 0 chr2 244409724 244409819 -6278035 - L1MA10 LINE L1 0 6334 6234 2084 84 0 0 chr2 244409835 244410097 -6277757 - AluSg SINE Alu -14 296 35 690 292 69 31 chr2 244410097 244410966 -6276888 - L1MC/D LINE L1 -751 5395 4549 2476 54 0 3 chr2 244411078 244411374 -6276480 + AluY SINE Alu 1 295 -16 413 241 81 51 chr2 244411488 244411724 -6276130 + HAL1 LINE L1 2264 2506 -1 1776 226 139 25 chr2 244412591 244413153 -6274701 + MLT1E2 LTR MaLR 1 626 0 337 250 48 29 chr2 244413157 244413261 -6274593 + MER117 DNA MER1_type 88 193 -4 249 345 85 14 chr2 244414533 244414756 -6273098 + HAL1 LINE L1 1426 1664 -843 227 119 0 0 chr2 244415500 244415542 -6272312 + LTR66 LTR ERVL 398 439 -171 2368 93 3 3 chr2 244415659 244415960 -6271894 + AluSc SINE Alu 1 301 -8 740 225 51 81 chr2 244416407 244416481 -6271373 - MER45C DNA AcHobo -628 953 878 1798 166 3 7 chr2 244416481 244416764 -6271090 + AluJo SINE Alu 1 282 -30 740 225 51 81 chr2 244416764 244416925 -6270929 - MER45C DNA AcHobo -703 878 725 1100 228 13 13 chr2 244417037 244417269 -6270585 - MER45C DNA AcHobo -721 232 1 1789 148 66 38 chr2 244417648 244418013 -6269841 - THE1C LTR MaLR 0 375 1 466 211 11 0 chr2 244418213 244418303 -6269551 + L2 LINE L2 3220 3310 -3 2442 106 0 0 chr2 244418871 244419183 -6268671 - AluSx SINE Alu 0 312 1 265 301 96 14 chr2 244419395 244419541 -6268313 - MIR SINE MIR -85 177 20 186 167 0 0 chr2 244419946 244419982 -6267872 + (TG)n Simple_repeat Simple_repeat 1 36 0 229 347 52 73 chr2 244420946 244421370 -6266484 + L2 LINE L2 2857 3271 -1 2209 94 11 0 chr2 244421742 244422050 -6265804 + AluSg SINE Alu 1 311 0 604 234 138 11 chr2 244422215 244422403 -6265451 + MER58C DNA MER1_type 1 212 -3 427 331 65 7 chr2 244422483 244422637 -6265217 + MIR SINE MIR 8 170 -92 1137 253 162 49 chr2 244422637 244423046 -6264808 + LTR24B LTR ERV1 1 484 -151 183 42 0 0 chr2 244423046 244423070 -6264784 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1137 253 162 49 chr2 244423070 244423197 -6264657 + LTR24B LTR ERV1 484 595 -40 372 291 44 6 chr2 244424249 244424407 -6263447 - LTR16B LTR ERVL -87 377 214 291 323 8 15 chr2 244424427 244424557 -6263297 - LTR16B LTR ERVL -74 390 262 329 143 13 39 chr2 244424779 244424856 -6262998 - L1MA5 LINE L1 -5 6295 6221 733 167 46 23 chr2 244424856 244425030 -6262824 + L1MA4 LINE L1 5915 6092 -208 911 257 35 84 chr2 244425500 244425801 -6262053 - LTR16B LTR ERVL -2 462 193 2565 159 66 8 chr2 244425801 244426285 -6261569 + LTR64 LTR ERVK 2 513 0 911 257 35 84 chr2 244426285 244426469 -6261385 - LTR16B LTR ERVL -271 193 1 197 376 40 0 chr2 244426995 244427144 -6260710 - MIR SINE MIR -41 221 67 1132 266 59 18 chr2 244427415 244427806 -6260048 - MLT1C LTR MaLR 0 467 61 429 258 17 0 chr2 244430771 244430891 -6256963 - L1ME3A LINE L1 -9 6161 6040 661 146 9 0 chr2 244430907 244431017 -6256837 + L1M1 LINE L1 5638 5748 -555 2083 68 75 11 chr2 244433766 244434045 -6253809 + AluY SINE Alu 1 297 -14 3925 200 47 18 chr2 244434059 244434928 -6252926 - MER63C DNA MER1_type -34 896 3 2451 73 3 3 chr2 244435028 244435330 -6252524 + AluY SINE Alu 3 304 -7 189 0 0 0 chr2 244435507 244435528 -6252326 + (GGAGA)n Simple_repeat Simple_repeat 2 22 0 662 203 33 6 chr2 244435528 244435694 -6252160 - L1P5 LINE L1 -700 5454 5285 665 322 39 18 chr2 244436492 244436860 -6250994 - L1MC4a LINE L1 -298 5823 5473 290 132 19 0 chr2 244437426 244437479 -6250375 + CT-rich Low_complexity Low_complexity 4 57 0 334 280 36 36 chr2 244437485 244437653 -6250201 - L1MC5 LINE L1 -167 7794 7627 242 264 93 39 chr2 244438792 244438921 -6248933 + MIR SINE MIR 91 226 -36 306 262 90 8 chr2 244439387 244439509 -6248345 + MLT1I LTR MaLR 43 174 -235 641 251 30 6 chr2 244441166 244441333 -6246521 - LTR16B LTR ERVL -284 180 10 2277 209 93 38 chr2 244441468 244442027 -6245827 + MLT1E LTR MaLR 1 590 -3 2151 127 10 3 chr2 244442612 244442912 -6244942 + AluSx SINE Alu 1 302 -10 834 106 14 7 chr2 244443708 244443850 -6244004 + (TTCC)n Simple_repeat Simple_repeat 4 146 0 5692 167 22 1 chr2 244444015 244445010 -6242844 - L1MC2 LINE L1 -1 6343 5328 3779 277 76 25 chr2 244445001 244446875 -6240979 - L1MC2 LINE L1 -1194 4952 2982 * 236 237 0 53 chr2 244446868 244446944 -6240910 - L1MC/D LINE L1 -1923 5885 5814 * 4875 165 45 94 chr2 244446969 244447070 -6240784 - L1MC3 LINE L1 -1 7784 7680 1397 252 58 58 chr2 244447070 244447590 -6240264 - MLT2B1 LTR ERVL 0 520 1 4875 165 45 94 chr2 244447590 244447856 -6239998 - L1MC3 LINE L1 -105 7680 7403 2160 99 40 13 chr2 244447856 244448160 -6239694 - AluSx SINE Alu 0 312 1 4875 165 45 94 chr2 244448160 244448535 -6239319 - L1MC3 LINE L1 -382 7403 7120 2219 110 3 0 chr2 244448535 244448827 -6239027 - AluSp SINE Alu -16 297 5 4875 165 45 94 chr2 244448827 244449291 -6238563 - L1MC3 LINE L1 -665 7120 6635 1073 187 28 71 chr2 244449293 244449576 -6238278 - L1MC/D LINE L1 -1984 5824 5554 402 261 17 26 chr2 244449654 244449769 -6238085 + MLT2B1 LTR ERVL 1 114 -406 668 179 0 27 chr2 244449772 244449884 -6237970 - L1MC/D LINE L1 -2258 5550 5442 26 0 0 0 chr2 244450039 244450065 -6237789 + AT_rich Low_complexity Low_complexity 1 26 0 1827 172 0 0 chr2 244451692 244451971 -6235883 + AluSx SINE Alu 1 279 -33 180 77 0 0 chr2 244451978 244452004 -6235850 + (CAA)n Simple_repeat Simple_repeat 2 27 0 306 344 33 7 chr2 244452912 244453063 -6234791 - MIR SINE MIR -65 197 43 439 195 12 0 chr2 244453081 244453163 -6234691 + MLT1B LTR MaLR 1 83 -307 196 205 72 24 chr2 244453748 244453831 -6234023 - L2 LINE L2 -290 2982 2896 240 309 102 40 chr2 244453886 244454290 -6233564 - L2 LINE L2 -1549 1765 1337 223 226 86 43 chr2 244455264 244455357 -6232497 - MIR SINE MIR -65 143 47 314 300 81 0 chr2 244455706 244455866 -6231988 - LTR33 LTR ERVL -222 299 127 1719 108 15 35 chr2 244456186 244456446 -6231408 - MER1B DNA MER1_type -23 316 62 946 257 17 8 chr2 244456443 244456680 -6231174 - MER33 DNA MER1_type -85 239 1 * 560 281 81 14 chr2 244457050 244457260 -6230594 + MIR SINE MIR 31 254 -8 2003 151 20 0 chr2 244458002 244458307 -6229547 - AluJb SINE Alu -1 311 1 304 164 0 0 chr2 244458396 244458451 -6229403 - MLT1K LTR MaLR -163 425 371 2922 235 29 5 chr2 244458878 244459507 -6228347 - MER82 DNA MER2_type -6 647 4 26 50 0 0 chr2 244459983 244460023 -6227831 + AT_rich Low_complexity Low_complexity 1 40 0 2572 51 0 0 chr2 244460614 244460910 -6226944 - AluY SINE Alu -15 296 1 216 67 0 0 chr2 244461603 244461633 -6226221 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 185 217 217 0 chr2 244461643 244461703 -6226151 - MIR SINE MIR -70 192 120 3384 224 39 45 chr2 244462719 244463120 -6224734 - MER63C DNA MER1_type -130 930 528 1703 180 9 29 chr2 244463120 244463464 -6224390 + MER1B DNA MER1_type 1 337 0 3384 224 39 45 chr2 244463464 244463710 -6224144 - MER63C DNA MER1_type -532 528 282 1994 142 0 42 chr2 244463710 244464019 -6223835 - AluSx SINE Alu -16 296 1 3384 224 39 45 chr2 244464019 244464299 -6223555 - MER63C DNA MER1_type -778 282 8 3706 108 10 56 chr2 244464483 244464790 -6223064 + MER4A LTR ERV1 1 266 -334 1871 116 4 8 chr2 244464790 244465058 -6222796 + AluSc SINE Alu 35 301 -8 3706 108 10 56 chr2 244465058 244465377 -6222477 + MER4A LTR ERV1 266 598 -2 1850 93 101 0 chr2 244465811 244466079 -6221775 - AluSq SINE Alu -18 295 1 329 228 47 74 chr2 244466740 244466889 -6220965 - L1M LINE L1 -960 5399 5255 847 247 100 27 chr2 244466942 244467242 -6220612 - L1ME3A LINE L1 -46 6124 5803 4964 63 5 12 chr2 244467250 244467896 -6219958 + L1PA10 LINE L1 5304 5944 -224 360 104 0 0 chr2 244467896 244467944 -6219910 - Alu SINE Alu -253 48 1 2122 281 54 69 chr2 244467961 244468790 -6219064 - L1MEc LINE L1 -2325 3890 3093 1427 108 5 14 chr2 244468790 244469004 -6218850 - L1PB2 LINE L1 0 6151 5940 2122 281 54 69 chr2 244469004 244469696 -6218158 - L1MEc LINE L1 -3122 3093 2392 198 0 0 0 chr2 244469696 244469718 -6218136 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 294 139 0 0 chr2 244469721 244469764 -6218090 - AluJo SINE Alu -20 280 238 1217 168 0 21 chr2 244469765 244469956 -6217898 - AluJo SINE Alu -125 187 1 704 276 74 29 chr2 244469956 244470107 -6217747 - L1MEc LINE L1 -3960 2436 2293 1870 198 48 3 chr2 244470107 244470486 -6217368 - L1MC2 LINE L1 -5 6339 5944 704 276 74 29 chr2 244470486 244470731 -6217123 - L1MEc LINE L1 -4103 2293 2006 2965 9 0 0 chr2 244470731 244471046 -6216808 - AluYb8 SINE Alu -3 315 1 704 276 74 29 chr2 244471046 244471202 -6216652 - L1MEc LINE L1 -4390 2006 1858 241 143 175 0 chr2 244471403 244471466 -6216388 + HAL1 LINE L1 1524 1597 -910 451 234 21 7 chr2 244471476 244471617 -6216237 + L1MEd LINE L1 972 1114 -5005 1998 146 32 26 chr2 244472247 244472386 -6215468 + MER2 DNA MER2_type 1 138 -207 1315 100 61 61 chr2 244472386 244472492 -6215362 - MER30 DNA MER1_type 0 230 125 2395 88 3 0 chr2 244472492 244472787 -6215067 + AluSg SINE Alu 1 296 -14 1315 100 61 61 chr2 244472787 244472910 -6214944 - MER30 DNA MER1_type -104 126 1 1998 146 32 26 chr2 244472910 244473113 -6214741 + MER2 DNA MER2_type 138 345 0 378 171 0 0 chr2 244473264 244473334 -6214520 + (CA)n Simple_repeat Simple_repeat 2 71 0 359 352 116 21 chr2 244473360 244473741 -6214113 - L1M4 LINE L1 -461 5717 5301 1367 313 89 26 chr2 244473762 244475096 -6212758 - L1M4 LINE L1 -861 5285 3868 3418 139 11 15 chr2 244475270 244475796 -6212058 + MER1A DNA MER1_type 1 524 -3 935 171 18 70 chr2 244475820 244476048 -6211806 + AluJo SINE Alu 85 300 -12 213 39 0 0 chr2 244476535 244476561 -6211293 + (CAAAA)n Simple_repeat Simple_repeat 4 29 0 261 306 124 0 chr2 244477251 244477372 -6210482 + MIR3 SINE MIR 50 185 -23 2074 107 47 7 chr2 244477608 244477908 -6209946 - AluJb SINE Alu 0 312 1 229 290 153 0 chr2 244478975 244479099 -6208755 + MIR SINE MIR 9 151 -111 912 219 40 0 chr2 244479188 244479389 -6208465 + L1MB5 LINE L1 5966 6174 0 1256 220 45 61 chr2 244479505 244479901 -6207953 + MLT1B LTR MaLR 1 390 0 273 326 0 12 chr2 244479984 244480070 -6207784 + MLT1H1 LTR MaLR 48 132 -423 699 244 91 10 chr2 244480292 244480501 -6207353 + MLT1E LTR MaLR 364 589 -4 229 252 163 68 chr2 244481377 244481702 -6206152 - L2 LINE L2 -66 3206 2851 2339 101 0 13 chr2 244482168 244482475 -6205379 + AluSp SINE Alu 1 303 -10 11177 115 60 29 chr2 244532485 244534321 -6153533 - Tigger1 DNA MER2_type -245 2173 281 22 0 0 0 chr2 244535091 244535113 -6152741 + AT_rich Low_complexity Low_complexity 1 22 0 684 161 51 8 chr2 244535766 244535884 -6151970 + MER5A DNA MER1_type 6 128 -61 195 162 0 0 chr2 244536000 244536037 -6151817 + (CATA)n Simple_repeat Simple_repeat 4 40 0 287 186 8 115 chr2 244536090 244536232 -6151622 - L1 LINE L1 -2199 3947 3819 668 172 0 25 chr2 244536232 244536354 -6151500 - MLT1F LTR MaLR 0 542 424 1001 221 96 84 chr2 244536357 244536616 -6151238 + L1MC5 LINE L1 7201 7456 -505 1566 191 3 3 chr2 244536616 244536904 -6150950 + AluJo SINE Alu 1 288 -24 1001 221 96 84 chr2 244536904 244537165 -6150689 + L1MC5 LINE L1 7456 7727 -234 233 359 0 11 chr2 244537288 244537380 -6150474 + L2 LINE L2 2245 2335 -979 320 274 167 50 chr2 244537483 244537764 -6150090 + L2 LINE L2 2999 3312 -1 2087 68 39 0 chr2 244538489 244538770 -6149084 + AluSc SINE Alu 1 292 -17 476 196 11 0 chr2 244539332 244539424 -6148430 + L1MB7 LINE L1 5378 5470 -708 189 0 0 0 chr2 244539424 244539445 -6148409 + (TAA)n Simple_repeat Simple_repeat 1 21 0 978 104 0 21 chr2 244539451 244539577 -6148277 + AluSc SINE Alu 154 281 -28 342 0 0 0 chr2 244539577 244539615 -6148239 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3488 181 22 9 chr2 244539616 244540137 -6147717 + L1MB7 LINE L1 5489 6023 -161 3287 70 18 11 chr2 244540137 244540578 -6147276 + MLT2A1 LTR ERVL 1 444 0 3488 181 22 9 chr2 244540578 244540743 -6147111 + L1MB7 LINE L1 6023 6184 0 978 104 0 21 chr2 244540743 244540758 -6147096 + AluSc SINE Alu 280 294 -15 233 57 29 0 chr2 244540770 244540805 -6147049 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 1876 112 0 0 chr2 244541451 244541709 -6146145 + AluSq SINE Alu 1 258 -55 415 252 137 0 chr2 244543086 244543225 -6144629 + MIR3 SINE MIR 40 197 -11 279 0 0 0 chr2 244543426 244543457 -6144397 + (CA)n Simple_repeat Simple_repeat 2 32 0 865 270 72 53 chr2 244545095 244545232 -6142622 - L1MEc LINE L1 -4363 2033 1900 261 0 0 0 chr2 244545232 244545261 -6142593 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2082 103 0 0 chr2 244545262 244545543 -6142311 - AluSx SINE Alu -31 281 1 865 270 72 53 chr2 244545543 244545874 -6141980 - L1MEc LINE L1 -4495 1901 1554 454 283 115 5 chr2 244545989 244546180 -6141674 - L2 LINE L2 -890 2424 2213 1926 147 0 10 chr2 244546598 244546910 -6140944 + AluSx SINE Alu 1 309 -3 235 244 93 47 chr2 244547171 244547257 -6140597 - L2 LINE L2 -24 3248 3159 800 172 141 21 chr2 244547542 244547734 -6140120 + MER20 DNA MER1_type 2 216 -3 1416 17 0 29 chr2 244548020 244548195 -6139659 - L1PA4 LINE L1 0 6155 5986 352 23 0 0 chr2 244548197 244548241 -6139613 + L1PA4 LINE L1 5943 5986 -169 2030 113 3 39 chr2 244548411 244548720 -6139134 + AluSx SINE Alu 1 298 -14 1883 147 0 0 chr2 244549070 244549355 -6138499 - AluSx SINE Alu -23 289 5 748 103 0 125 chr2 244549359 244549495 -6138359 + Tigger1 DNA MER2_type 2300 2418 0 1446 210 45 25 chr2 244549500 244549860 -6137994 + L1ME2 LINE L1 5809 6333 -1 1440 201 23 13 chr2 244549986 244550295 -6137559 + AluJb SINE Alu 1 312 0 495 48 0 0 chr2 244550305 244550367 -6137487 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 399 268 52 80 chr2 244553001 244553073 -6134781 + L1ME LINE L1 5366 5438 -683 2077 131 0 0 chr2 244553073 244553370 -6134484 + AluSx SINE Alu 1 297 -15 399 268 52 80 chr2 244553370 244553584 -6134270 + L1ME LINE L1 5438 5644 -477 3162 146 4 4 chr2 244553685 244554171 -6133683 - MER66B LTR ERV1 0 486 1 495 243 53 53 chr2 244554270 244554439 -6133415 + MLT1K LTR MaLR 346 514 -74 260 353 22 7 chr2 244555125 244555261 -6132593 + MER5A DNA MER1_type 7 144 -45 923 79 79 0 chr2 244555301 244555428 -6132426 - MER85 DNA T2_type -2 137 1 773 117 0 0 chr2 244555711 244555822 -6132032 - AluSq SINE Alu 0 313 203 1077 97 0 0 chr2 244555822 244555967 -6131887 - AluSq SINE Alu -167 145 1 513 279 81 40 chr2 244556251 244556548 -6131306 - L1MC/D LINE L1 -2228 5580 5272 21 0 0 0 chr2 244556585 244556606 -6131248 + AT_rich Low_complexity Low_complexity 1 21 0 1701 185 43 6 chr2 244556613 244556964 -6130890 - L1MB8 LINE L1 -1 6177 5814 1354 152 74 0 chr2 244556964 244557208 -6130646 - AluJb SINE Alu -18 294 33 2766 163 30 4 chr2 244557208 244557717 -6130137 - L1MB8 LINE L1 -359 5825 5304 441 287 43 75 chr2 244557889 244558168 -6129686 - L1MB8 LINE L1 -1110 5036 4767 278 88 0 0 chr2 244558796 244558830 -6129024 + Alu SINE Alu 6 39 -263 518 237 62 135 chr2 244558974 244559113 -6128741 - L1ME LINE L1 -281 5840 5692 1895 151 0 6 chr2 244559113 244559425 -6128429 + AluJb SINE Alu 1 310 -2 518 237 62 135 chr2 244559425 244559609 -6128245 - L1ME LINE L1 -429 5692 5540 196 292 108 42 chr2 244559659 244559678 -6128176 - L2 LINE L2 0 3313 3297 219 114 0 0 chr2 244559678 244559713 -6128141 + (CCAA)n Simple_repeat Simple_repeat 1 35 0 196 292 108 42 chr2 244559713 244559813 -6128041 - L2 LINE L2 -16 3297 3186 22 35 0 0 chr2 244560204 244560233 -6127621 + AT_rich Low_complexity Low_complexity 1 29 0 1836 100 0 84 chr2 244560244 244560555 -6127299 + AluSx SINE Alu 12 296 -16 3056 158 42 14 chr2 244560557 244561126 -6126728 - L1MB3 LINE L1 -4 6179 5595 800 156 0 0 chr2 244561140 244561262 -6126592 - FRAM SINE Alu -30 146 25 998 190 0 0 chr2 244561286 244561460 -6126394 - FRAM SINE Alu -2 174 1 1186 106 0 12 chr2 244561470 244561640 -6126214 - AluSg/x SINE Alu -16 296 129 2220 93 0 34 chr2 244561645 244561968 -6125886 - AluSx SINE Alu 0 312 1 1092 119 26 21 chr2 244561978 244562171 -6125683 - L1MB3 LINE L1 -701 5482 5289 609 177 27 54 chr2 244562643 244562790 -6125064 + L1MB2 LINE L1 6029 6171 0 2244 107 0 0 chr2 244562797 244563106 -6124748 + AluSc SINE Alu 1 309 0 1258 225 28 48 chr2 244563183 244563417 -6124437 + Charlie4a DNA MER1_type 43 267 -1694 2272 71 13 7 chr2 244563417 244563725 -6124129 + AluY SINE Alu 1 310 -1 1258 225 28 48 chr2 244563725 244563890 -6123964 + Charlie4a DNA MER1_type 267 434 -74 1782 157 0 7 chr2 244563895 244564188 -6123666 + AluJb SINE Alu 1 291 -21 396 0 0 0 chr2 244564267 244564311 -6123543 + (TG)n Simple_repeat Simple_repeat 1 44 0 1985 174 75 85 chr2 244564434 244564927 -6122927 + MLT1D LTR MaLR 18 505 0 955 129 154 40 chr2 244565515 244565716 -6122138 + AluJb SINE Alu 1 224 -88 1628 140 6 76 chr2 244565869 244565959 -6121895 - AluJo SINE Alu -19 293 198 1597 89 36 13 chr2 244565959 244566184 -6121670 + MER30 DNA MER1_type 1 230 0 1628 140 6 76 chr2 244566184 244566408 -6121446 - AluJo SINE Alu -114 198 1 26 23 0 23 chr2 244566607 244566627 -6121227 + AT_rich Low_complexity Low_complexity 1 20 -23 1946 134 0 0 chr2 244566627 244566910 -6120944 + AluSx SINE Alu 3 285 -27 26 23 0 23 chr2 244566910 244566933 -6120921 + AT_rich Low_complexity Low_complexity 20 43 0 207 0 0 0 chr2 244567090 244567113 -6120741 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 249 129 387 0 chr2 244567145 244567207 -6120647 - MLT1I LTR MaLR 0 409 324 452 279 73 0 chr2 244567258 244567394 -6120460 - MLT1J2 LTR MaLR -234 216 71 1702 137 0 18 chr2 244567566 244567844 -6120010 + AluJb SINE Alu 1 273 -39 247 82 82 0 chr2 244567847 244567896 -6119958 + GA-rich Low_complexity Low_complexity 3 55 0 272 362 95 9 chr2 244567913 244568130 -6119724 - MIR SINE MIR -11 251 18 1985 163 132 0 chr2 244568177 244568526 -6119328 + MSTB LTR MaLR 30 424 -2 653 203 25 0 chr2 244569244 244569362 -6118492 + FLAM_A SINE Alu 1 121 -12 311 315 47 34 chr2 244570888 244571123 -6116731 + L1ME3A LINE L1 5644 5881 -289 350 317 24 6 chr2 244571449 244571613 -6116241 + L1ME4a LINE L1 5725 5891 -230 2114 93 20 17 chr2 244571615 244571916 -6115938 + AluSx SINE Alu 1 302 -10 314 333 107 50 chr2 244573589 244573632 -6114222 - L3 LINE CR1 -929 648 609 1779 180 7 0 chr2 244573632 244573937 -6113917 - AluJb SINE Alu -1 311 5 314 333 107 50 chr2 244573937 244574154 -6113700 - L3 LINE CR1 -968 609 373 338 328 25 25 chr2 244574419 244574541 -6113313 - L2 LINE L2 -1 3271 3150 935 212 22 0 chr2 244574629 244574808 -6113046 + MLT1E LTR MaLR 1 183 -410 406 261 88 62 chr2 244574898 244574983 -6112871 + L2 LINE L2 3021 3102 -211 2231 89 0 16 chr2 244574983 244575297 -6112557 - AluSp SINE Alu -4 309 1 406 261 88 62 chr2 244575297 244575437 -6112417 + L2 LINE L2 3102 3252 -61 209 200 0 0 chr2 244575625 244575660 -6112194 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 2011 110 4 4 chr2 244575863 244576174 -6111680 - AluSx SINE Alu 0 311 1 207 182 0 0 chr2 244576290 244576323 -6111531 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 873 202 56 20 chr2 244576381 244576633 -6111221 + L1M4 LINE L1 4598 4858 -1288 666 196 27 7 chr2 244576629 244576777 -6111077 - L1MA4 LINE L1 -34 6266 6116 * 1159 153 84 5 chr2 244576787 244576977 -6110877 - MER1B DNA MER1_type -92 205 1 558 187 32 0 chr2 244576979 244577102 -6110752 - L1MA4 LINE L1 -185 6115 5989 1596 166 14 4 chr2 244577419 244577696 -6110158 + AluJo SINE Alu 1 280 -32 210 71 0 0 chr2 244577702 244577730 -6110124 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 527 187 38 148 chr2 244578262 244578343 -6109511 - MER5A DNA MER1_type 0 189 101 2254 99 0 3 chr2 244578343 244578655 -6109199 + AluSx SINE Alu 2 312 0 527 187 38 148 chr2 244578655 244578782 -6109072 - MER5A DNA MER1_type -88 101 4 204 40 0 0 chr2 244579267 244579292 -6108562 + (CA)n Simple_repeat Simple_repeat 1 25 0 263 286 31 20 chr2 244580048 244580146 -6107708 - MARNA DNA Mariner -99 487 389 316 223 36 72 chr2 244580261 244580400 -6107454 - LTR67 LTR ERVL -11 546 413 351 0 0 0 chr2 244581160 244581199 -6106655 + (CTG)n Simple_repeat Simple_repeat 1 39 0 230 239 0 0 chr2 244581315 244581361 -6106493 + L2 LINE L2 3224 3269 -3 22 0 0 0 chr2 244581447 244581469 -6106385 + AT_rich Low_complexity Low_complexity 1 22 0 480 454 159 9 chr2 244582124 244582457 -6105397 - MLT1B LTR MaLR -4 386 4 2224 102 13 0 chr2 244582767 244583071 -6104783 + AluSx SINE Alu 1 308 -4 1609 158 21 21 chr2 244584194 244584485 -6103369 - AluJo SINE Alu -21 291 1 2086 99 10 7 chr2 244584901 244585194 -6102660 - AluSq SINE Alu -19 294 1 1111 222 16 4 chr2 244585318 244585570 -6102284 - L1MB5 LINE L1 -95 6079 5825 263 257 54 0 chr2 244585699 244585773 -6102081 + L2 LINE L2 2619 2696 -618 394 218 28 78 chr2 244585937 244586079 -6101775 + L1MC4 LINE L1 5695 5829 -1979 * 1210 229 45 126 chr2 244586074 244586764 -6101090 + L1MC4 LINE L1 7392 8025 -17 462 320 58 33 chr2 244587123 244587234 -6100620 + L1MC/D LINE L1 5373 5480 -2328 2148 114 7 13 chr2 244587234 244587542 -6100312 + AluSg SINE Alu 1 306 -4 462 320 58 33 chr2 244587542 244587824 -6100030 + L1MC/D LINE L1 5480 5776 -2032 27 0 0 0 chr2 244588156 244588183 -6099671 + AT_rich Low_complexity Low_complexity 1 27 0 1477 95 222 21 chr2 244588681 244588924 -6098930 + AluSg1 SINE Alu 2 293 -16 423 303 21 41 chr2 244589026 244589171 -6098683 - MER5A DNA MER1_type -5 184 43 * 442 244 8 53 chr2 244589042 244589173 -6098681 + MER5A DNA MER1_type 36 160 -29 472 175 0 14 chr2 244589338 244589481 -6098373 + (TTGG)n Simple_repeat Simple_repeat 1 141 0 1748 231 61 34 chr2 244589818 244590324 -6097530 + MLT2B1 LTR ERVL 1 520 0 261 317 69 35 chr2 244590341 244590486 -6097368 - MIR3 SINE MIR -57 151 2 232 281 67 112 chr2 244591479 244591592 -6096262 + MIR SINE MIR 66 171 -91 2211 55 44 0 chr2 244591592 244591905 -6095949 - AluY SINE Alu 0 325 1 232 281 67 112 chr2 244591905 244591968 -6095886 + MIR SINE MIR 171 235 -27 558 213 3 0 chr2 244592678 244592983 -6094871 + (CA)n Simple_repeat Simple_repeat 1 306 0 492 226 0 29 chr2 244593612 244593749 -6094105 - MER20 DNA MER1_type -59 160 28 188 240 60 0 chr2 244593814 244593864 -6093990 - MIR3 SINE MIR -48 160 108 1908 220 70 45 chr2 244594101 244594486 -6093368 + L1ME1 LINE L1 5514 5923 -243 3581 127 15 8 chr2 244594486 244595007 -6092847 - MER1A DNA MER1_type 0 527 3 1908 220 70 45 chr2 244595007 244595247 -6092607 + L1ME1 LINE L1 5923 6155 -11 2219 98 6 38 chr2 244595248 244595566 -6092288 + AluSx SINE Alu 1 308 -4 227 189 30 60 chr2 244595851 244595940 -6091914 + MIR SINE MIR 48 135 -73 2711 133 60 40 chr2 244596465 244596984 -6090870 + L1PA15 LINE L1 5633 6161 -4 310 319 11 11 chr2 244596995 244597113 -6090741 + MIR SINE MIR 31 147 -61 1042 160 0 0 chr2 244598248 244598404 -6089450 - AluJo/FRAM SINE Alu -16 296 141 350 82 0 0 chr2 244598405 244598454 -6089400 - AluJ/FLAM SINE Alu -211 91 43 442 310 52 2 chr2 244598554 244598710 -6089144 + MIR SINE MIR 37 198 -64 1612 169 46 60 chr2 244599777 244600143 -6087711 + MLT1A2 LTR MaLR 1 361 -13 1783 181 3 17 chr2 244600512 244600805 -6087049 + AluJo SINE Alu 1 289 -23 495 322 57 0 chr2 244601603 244601780 -6086074 - MIR3 SINE MIR -14 194 8 184 290 58 51 chr2 244602296 244602434 -6085420 - L2 LINE L2 -8 3305 3167 2281 121 0 0 chr2 244602658 244602965 -6084889 - AluSx SINE Alu -5 307 1 2401 153 55 18 chr2 244603544 244603981 -6083873 - LTR32 LTR ERVL 0 471 19 189 0 0 0 chr2 244605498 244605519 -6082335 + (T)n Simple_repeat Simple_repeat 1 21 0 1799 169 10 13 chr2 244606392 244606693 -6081161 - AluJb SINE Alu -12 300 1 1234 148 218 8 chr2 244606696 244606939 -6080915 - AluJo SINE Alu -8 294 1 251 198 187 11 chr2 244606951 244607042 -6080812 - L1ME3A LINE L1 -8 6162 6056 279 272 19 10 chr2 244607329 244607432 -6080422 - L1ME3A LINE L1 -417 5745 5642 2409 113 0 0 chr2 244608719 244609028 -6078826 - AluSx SINE Alu -3 309 1 1949 202 7 46 chr2 244609231 244609662 -6078192 - MLT2D LTR ERVL 0 414 1 208 379 68 0 chr2 244609676 244609779 -6078075 - MIR3 SINE MIR -18 190 81 2288 119 0 3 chr2 244610014 244610325 -6077529 - AluSx SINE Alu 0 312 3 273 303 118 8 chr2 244610467 244610586 -6077268 + MIR SINE MIR 52 183 -79 1997 126 39 0 chr2 244611292 244611578 -6076276 + AluSx SINE Alu 1 297 -15 1024 246 62 77 chr2 244611578 244612046 -6075808 + MLT1C LTR MaLR 3 463 -4 254 235 112 51 chr2 244612681 244612779 -6075075 + MIR SINE MIR 19 122 -140 2238 98 7 0 chr2 244612866 244613153 -6074701 - AluSg SINE Alu -21 289 1 1913 139 4 0 chr2 244614086 244614367 -6073487 + AluSq SINE Alu 1 282 -31 486 0 0 0 chr2 244614368 244614422 -6073432 + (TA)n Simple_repeat Simple_repeat 2 55 0 307 295 81 94 chr2 244614462 244614696 -6073158 - L1ME LINE L1 -336 5785 5555 1349 214 69 48 chr2 244614778 244615156 -6072698 - MLT1B LTR MaLR -4 386 1 185 200 180 50 chr2 244615406 244615506 -6072348 + MIR3 SINE MIR 12 124 -84 1754 168 0 35 chr2 244616400 244616715 -6071139 + AluJo SINE Alu 1 304 -8 266 274 8 113 chr2 244617003 244617127 -6070727 + L2 LINE L2 3160 3270 -2 433 286 27 27 chr2 244617324 244617471 -6070383 - MIR SINE MIR -68 194 48 220 234 93 65 chr2 244617516 244617623 -6070231 + MIR SINE MIR 31 141 -67 5086 207 25 21 chr2 244618251 244618413 -6069441 - L1 LINE L1 -870 5276 5116 2594 52 0 7 chr2 244618413 244618720 -6069134 - AluY SINE Alu -6 305 1 5086 207 25 21 chr2 244618720 244618794 -6069060 - L1 LINE L1 -1030 5116 5044 597 52 0 0 chr2 244618794 244618871 -6068983 + (TTCC)n Simple_repeat Simple_repeat 3 79 0 2393 72 0 0 chr2 244618876 244619155 -6068699 - AluSq SINE Alu -34 279 1 5086 207 25 21 chr2 244619155 244620092 -6067762 - L1 LINE L1 -1105 5041 4092 * 5577 117 11 3 chr2 244620090 244620976 -6066878 + L1PA16 LINE L1 5274 6166 0 267 307 50 0 chr2 244621144 244621245 -6066609 - MIR3 SINE MIR -43 165 60 1600 143 0 13 chr2 244621702 244621933 -6065921 - AluSq SINE Alu -85 228 1 1274 108 0 0 chr2 244622370 244622528 -6065326 - AluSq SINE Alu -31 282 125 308 178 85 85 chr2 244622775 244622871 -6064983 + MER5B DNA MER1_type 8 112 -77 339 180 0 16 chr2 244622873 244622934 -6064920 - Tigger5 DNA MER2_type 0 2323 2264 216 313 0 0 chr2 244623196 244623359 -6064495 + (TAGG)n Simple_repeat Simple_repeat 3 165 0 2363 94 7 0 chr2 244625470 244625767 -6062087 - AluSq SINE Alu -14 299 1 958 321 98 4 chr2 244626264 244626753 -6061101 - L2 LINE L2 -548 2766 2232 425 232 54 107 chr2 244626758 244626903 -6060951 - L2 LINE L2 -1384 1930 1800 2060 137 0 0 chr2 244626903 244627188 -6060666 - AluSx SINE Alu -15 297 13 425 232 54 107 chr2 244627188 244627266 -6060588 - L2 LINE L2 -1514 1800 1719 399 41 0 0 chr2 244629155 244629204 -6058650 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 2010 143 31 0 chr2 244630487 244630780 -6057074 + AluSx SINE Alu 1 302 -10 1607 175 48 31 chr2 244631129 244631421 -6056433 + AluJb SINE Alu 1 297 -15 245 158 22 122 chr2 244631426 244631565 -6056289 + Charlie5 DNA MER1_type 2475 2599 -13 770 82 0 0 chr2 244632581 244632679 -6055175 - AluS SINE Alu -213 99 2 1665 262 44 26 chr2 244632680 244633428 -6054426 - L1MCc LINE L1 -4887 1536 968 2595 98 0 5 chr2 244633431 244633800 -6054054 + MER41A LTR ERV1 1 367 -187 2780 133 23 62 chr2 244633817 244634381 -6053473 - LTR10A LTR ERV1 -65 544 3 1041 99 121 22 chr2 244634382 244634564 -6053290 + MER41B LTR ERV1 436 635 0 328 248 24 78 chr2 244634590 244634796 -6053058 - L1MCc LINE L1 -5486 937 743 351 330 23 6 chr2 244634991 244635167 -6052687 - L1MCc LINE L1 -5986 437 259 2320 94 0 0 chr2 244635491 244635800 -6052054 - AluSq SINE Alu 0 309 1 238 336 53 0 chr2 244636245 244636358 -6051496 - MIR SINE MIR -6 256 138 234 0 0 0 chr2 244636520 244636546 -6051308 + (TTC)n Simple_repeat Simple_repeat 2 27 0 2149 124 0 7 chr2 244636558 244636849 -6051005 - AluSx SINE Alu -23 289 1 303 305 14 45 chr2 244636944 244637167 -6050687 - L1MC4a LINE L1 -1907 5901 5686 * 705 237 23 6 chr2 244637155 244637328 -6050526 + MIR SINE MIR 76 251 -11 270 0 0 0 chr2 244637332 244637362 -6050492 + (TTA)n Simple_repeat Simple_repeat 3 32 0 340 279 44 25 chr2 244637466 244637624 -6050230 + L1MC/D LINE L1 5370 5530 -2278 2488 281 35 41 chr2 244638762 244638901 -6048953 + MER69 DNA AcHobo 1 139 -2387 1677 148 105 11 chr2 244638901 244639178 -6048676 - AluJo SINE Alu -9 303 1 2488 281 35 41 chr2 244639178 244640010 -6047844 + MER69 DNA AcHobo 139 967 -1559 2378 109 6 0 chr2 244640010 244640321 -6047533 - AluSq SINE Alu 0 313 1 2488 281 35 41 chr2 244640321 244640389 -6047465 + MER69 DNA AcHobo 967 1034 -1492 460 181 45 110 chr2 244640397 244640552 -6047302 + MER69 DNA AcHobo 2382 2526 0 1845 254 106 17 chr2 244640590 244641444 -6046410 - L1MC4a LINE L1 0 7904 7020 1354 129 0 0 chr2 244641449 244641643 -6046211 - AluSg/x SINE Alu -1 311 118 2317 108 0 10 chr2 244641648 244641953 -6045901 - AluSg SINE Alu -4 306 5 1627 237 93 2 chr2 244641956 244642407 -6045447 - L1MC4 LINE L1 -996 7046 6555 342 0 0 0 chr2 244644162 244644200 -6043654 + (TG)n Simple_repeat Simple_repeat 2 39 0 249 229 102 28 chr2 244644948 244645096 -6042758 - L1M2 LINE L1 -842 5449 5294 2291 86 4 0 chr2 244645365 244645686 -6042168 + AluSg SINE Alu 1 322 0 877 211 42 0 chr2 244645723 244645913 -6041941 + MER3 DNA MER1_type 1 198 -11 1910 142 23 16 chr2 244645951 244646261 -6041593 + AluSx SINE Alu 1 312 0 2098 124 3 0 chr2 244646273 244646595 -6041259 + AluSx SINE Alu 1 323 0 387 0 0 0 chr2 244647005 244647048 -6040806 + (CA)n Simple_repeat Simple_repeat 2 44 0 2242 111 7 0 chr2 244647437 244647734 -6040120 + AluSx SINE Alu 1 299 -13 2226 110 23 0 chr2 244648891 244649191 -6038663 - AluSq SINE Alu -4 309 3 1790 176 0 0 chr2 244649882 244650166 -6037688 + AluJo SINE Alu 28 311 -1 1805 194 59 29 chr2 244650475 244650919 -6036935 - MLT1C LTR MaLR -2 465 9 1832 182 0 22 chr2 244651790 244652109 -6035745 - AluJo SINE Alu 0 312 1 348 294 210 33 chr2 244652149 244652577 -6035277 - HAL1 LINE L1 -1909 598 95 339 260 40 40 chr2 244652598 244652771 -6035083 - L1ME LINE L1 -326 5795 5623 276 161 35 23 chr2 244652788 244652875 -6034979 + (TA)n Simple_repeat Simple_repeat 2 89 0 473 301 75 20 chr2 244652948 244653147 -6034707 + MIR SINE MIR 34 243 -19 1830 145 36 36 chr2 244653207 244653510 -6034344 - AluJo SINE Alu -6 306 4 318 182 0 0 chr2 244654651 244654706 -6033148 - MLT1C LTR MaLR 0 467 413 1171 157 91 5 chr2 244654713 244654911 -6032943 + AluJo SINE Alu 82 296 -16 1160 215 71 45 chr2 244654925 244655199 -6032655 - MLT1C LTR MaLR -52 415 129 2331 119 14 30 chr2 244655199 244655568 -6032286 - THE1B LTR MaLR 0 364 2 1160 215 71 45 chr2 244655568 244655647 -6032207 - MLT1C LTR MaLR -338 129 53 507 297 7 0 chr2 244655671 244655809 -6032045 + MER5B DNA MER1_type 34 172 -6 1819 164 7 4 chr2 244657254 244657535 -6030319 + AluJo SINE Alu 23 304 -8 1572 198 132 24 chr2 244657608 244658062 -6029792 + MLT1D LTR MaLR 1 503 -2 619 248 133 10 chr2 244658305 244658675 -6029179 - MLT1G LTR MaLR -9 581 96 298 256 12 24 chr2 244658730 244658812 -6029042 + MIR SINE MIR 35 115 -147 410 302 62 49 chr2 244659115 244659403 -6028451 + MLT1H LTR MaLR 60 351 -198 1964 170 0 0 chr2 244660071 244660371 -6027483 + AluJb SINE Alu 3 302 -10 313 20 61 0 chr2 244660607 244660656 -6027198 + (TTTC)n Simple_repeat Simple_repeat 4 55 0 2482 22 0 0 chr2 244660674 244660945 -6026909 - AluYa5 SINE Alu -6 305 35 2158 125 0 14 chr2 244660948 244661106 -6026748 - AluSx SINE Alu -21 291 137 2898 10 0 0 chr2 244661106 244661414 -6026440 - AluYa5 SINE Alu -3 308 1 2158 125 0 14 chr2 244661414 244661550 -6026304 - AluSx SINE Alu -175 137 1 481 252 67 0 chr2 244661628 244661747 -6026107 + L2 LINE L2 3187 3313 0 441 0 0 0 chr2 244661898 244661947 -6025907 + (CA)n Simple_repeat Simple_repeat 1 49 0 270 159 0 0 chr2 244662041 244662085 -6025769 - L2 LINE L2 -5 3308 3265 1144 281 72 43 chr2 244662230 244662439 -6025415 - L2 LINE L2 -5 3308 3107 2332 151 63 79 chr2 244662439 244662948 -6024906 - MLT1D LTR MaLR 0 505 5 1144 281 72 43 chr2 244662948 244663208 -6024646 - L2 LINE L2 -206 3107 2825 1655 178 64 32 chr2 244663208 244663544 -6024310 + MLT1B LTR MaLR 2 326 -64 2416 68 0 37 chr2 244663544 244663866 -6023988 - AluY SINE Alu -1 310 1 1768 144 58 0 chr2 244663866 244664143 -6023711 - AluJb SINE Alu -19 293 1 1655 178 64 32 chr2 244664143 244664182 -6023672 + MLT1B LTR MaLR 325 390 0 1742 234 32 36 chr2 244664191 244664661 -6023193 + LTR40a LTR ERVL 52 519 0 1376 272 204 10 chr2 244664687 244665375 -6022479 - L2 LINE L2 -554 2760 1940 23 0 0 0 chr2 244666269 244666292 -6021562 + GC_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr2 244666366 244666405 -6021449 + GC_rich Low_complexity Low_complexity 1 39 0 243 133 0 0 chr2 244666538 244666583 -6021271 + (CGGGGG)n Simple_repeat Simple_repeat 3 47 0 24 32 0 0 chr2 244666615 244666646 -6021208 + GC_rich Low_complexity Low_complexity 1 31 0 40 37 0 0 chr2 244666695 244666749 -6021105 + GC_rich Low_complexity Low_complexity 1 54 0 40 91 0 0 chr2 244666939 244667049 -6020805 + GC_rich Low_complexity Low_complexity 1 110 0 28 29 0 0 chr2 244667113 244667148 -6020706 + GC_rich Low_complexity Low_complexity 1 35 0 201 158 37 37 chr2 244667149 244667231 -6020623 + (CGCGG)n Simple_repeat Simple_repeat 3 84 0 247 314 16 58 chr2 244669636 244669757 -6018097 - MIR SINE MIR -56 206 91 2323 71 7 7 chr2 244670151 244670447 -6017407 - AluY SINE Alu -15 296 1 1601 195 0 13 chr2 244673002 244673309 -6014545 + AluJb SINE Alu 10 312 0 198 315 27 72 chr2 244673454 244673565 -6014289 - MIR SINE MIR -64 144 39 1115 208 68 57 chr2 244673579 244673949 -6013905 - MLT1A2 LTR MaLR 0 467 1 1495 207 131 11 chr2 244673950 244674384 -6013470 - MLT1D LTR MaLR -19 486 1 257 333 12 0 chr2 244674385 244674469 -6013385 + MIR3 SINE MIR 101 185 -23 218 259 35 0 chr2 244674769 244674827 -6013027 - L2 LINE L2 0 3272 3213 525 214 62 81 chr2 244675072 244675324 -6012530 - LTR33 LTR ERVL -273 250 31 380 264 10 124 chr2 244675336 244675537 -6012317 + MIR3 SINE MIR 25 202 -6 2150 112 3 7 chr2 244676632 244676951 -6010903 - AluSg SINE Alu 0 318 1 2122 135 0 0 chr2 244677420 244677716 -6010138 + AluY SINE Alu 2 297 -14 2058 156 112 0 chr2 244678044 244678239 -6009615 + MSTA LTR MaLR 1 173 -255 189 0 0 0 chr2 244678239 244678260 -6009594 + (TC)n Simple_repeat Simple_repeat 2 22 0 2058 156 112 0 chr2 244678260 244678449 -6009405 + MSTA LTR MaLR 173 428 0 2527 90 0 3 chr2 244679791 244680102 -6007752 - AluSg SINE Alu 0 310 1 1808 167 43 101 chr2 244681040 244681489 -6006365 + MLT1D LTR MaLR 3 418 -87 1753 195 6 25 chr2 244681489 244681807 -6006047 + AluJo SINE Alu 1 312 0 1808 167 43 101 chr2 244681807 244681891 -6005963 + MLT1D LTR MaLR 418 505 0 255 192 77 26 chr2 244681891 244681969 -6005885 + L1MA8 LINE L1 6205 6286 -5 1023 149 0 0 chr2 244682737 244682885 -6004969 - FRAM SINE Alu 0 40 1 2296 122 115 23 chr2 244682885 244683277 -6004577 + MSTA LTR MaLR 1 428 0 9128 150 31 23 chr2 244683279 244684844 -6003010 + MSTA-int LTR MaLR 3 1580 0 2209 132 91 5 chr2 244684864 244685250 -6002604 + MSTA LTR MaLR 10 428 0 987 179 0 52 chr2 244685250 244685423 -6002431 - AluJo SINE Alu -143 169 6 279 331 126 6 chr2 244686060 244686235 -6001619 + MIR SINE MIR 7 202 -60 304 274 41 0 chr2 244686617 244686690 -6001164 - L1ME4a LINE L1 -3 6118 6043 398 268 51 36 chr2 244687650 244687788 -6000066 + MIR SINE MIR 53 192 -70 1642 140 31 51 chr2 244687918 244688210 -5999644 + AluSg SINE Alu 1 286 -24 309 135 0 0 chr2 244688202 244688254 -5999600 + (GA)n Simple_repeat Simple_repeat 1 52 0 1758 136 91 0 chr2 244688544 244688808 -5999046 + AluSx SINE Alu 2 289 -23 32 0 0 0 chr2 244688808 244688840 -5999014 + AT_rich Low_complexity Low_complexity 1 32 0 1929 130 13 3 chr2 244689241 244689548 -5998306 + AluSx SINE Alu 1 310 -2 505 174 0 17 chr2 244689686 244689801 -5998053 + CT-rich Low_complexity Low_complexity 3 115 0 1407 121 9 93 chr2 244740399 244740722 -5947132 - AluSx SINE Alu -16 296 1 943 106 62 31 chr2 244741646 244741806 -5946048 + THE1B LTR MaLR 196 360 -4 450 200 11 11 chr2 244742638 244742733 -5945121 + FLAM_C SINE Alu 12 106 -37 480 180 8 55 chr2 244742998 244743126 -5944728 + FRAM SINE Alu 54 175 -1 2294 100 10 0 chr2 244743456 244743745 -5944109 - AluSx SINE Alu -20 292 1 253 304 256 15 chr2 244744980 244745246 -5942608 + L3 LINE CR1 1141 1470 -107 27 0 0 0 chr2 244746872 244746899 -5940955 + GC_rich Low_complexity Low_complexity 1 27 0 188 281 47 16 chr2 244748473 244748537 -5939317 + L2 LINE L2 3206 3271 -1 1007 142 12 0 chr2 244748919 244749081 -5938773 + AluSg SINE Alu 1 164 -146 2175 131 0 19 chr2 244749432 244749744 -5938110 - AluSq SINE Alu -7 306 1 1163 171 24 40 chr2 244750172 244750423 -5937431 + AluJo SINE Alu 12 258 -54 215 282 0 51 chr2 244751582 244751660 -5936194 - MIR SINE MIR -66 196 123 380 162 0 0 chr2 244751822 244751890 -5935964 + U4 snRNA snRNA 1 68 -77 33 103 0 0 chr2 244752266 244752383 -5935471 + GC_rich Low_complexity Low_complexity 1 117 0 2361 76 0 3 chr2 244752884 244753174 -5934680 + AluY SINE Alu 2 290 -21 191 309 49 12 chr2 244755669 244755750 -5932104 + L2 LINE L2 2974 3057 -215 224 346 71 8 chr2 244756043 244756170 -5931684 + L2 LINE L2 3137 3271 -1 2276 65 41 7 chr2 244756728 244757014 -5930840 + AluY SINE Alu 1 297 -9 243 0 0 0 chr2 244757014 244757041 -5930813 + (CCAA)n Simple_repeat Simple_repeat 2 28 0 217 176 20 0 chr2 244757172 244757223 -5930631 + A-rich Low_complexity Low_complexity 2 53 0 271 298 48 0 chr2 244757913 244757997 -5929857 - MIR SINE MIR -66 196 109 1219 203 39 27 chr2 244759145 244759475 -5928379 - MLT1B LTR MaLR 0 390 57 371 263 194 46 chr2 244760383 244760687 -5927167 - MLT1J LTR MaLR 0 511 163 227 168 58 36 chr2 244761307 244761444 -5926410 + (GTGTG)n Simple_repeat Simple_repeat 2 141 0 * 238 256 28 44 chr2 244761394 244761574 -5926280 + (GGGTG)n Simple_repeat Simple_repeat 4 180 0 270 284 32 32 chr2 244762719 244762814 -5925040 - MIR3 SINE MIR -15 193 99 2268 89 10 0 chr2 244762848 244763139 -5924715 + AluSq SINE Alu 1 294 -19 1913 143 176 57 chr2 244764019 244764509 -5923345 + LTR10A LTR ERV1 1 548 -61 2111 110 7 10 chr2 244765053 244765361 -5922493 - AluSq SINE Alu -6 307 1 498 176 19 19 chr2 244765398 244765506 -5922348 + MLT1D LTR MaLR 4 111 -279 550 102 10 41 chr2 244767666 244767764 -5920090 - AluY SINE Alu -9 302 208 2228 83 10 17 chr2 244768800 244769100 -5918754 - AluSq SINE Alu -15 298 1 483 309 9 24 chr2 244769468 244769678 -5918176 - MLT1J2 LTR MaLR -240 210 4 232 265 20 78 chr2 244770904 244771006 -5916848 - MIR SINE MIR -66 196 101 2070 128 3 0 chr2 244771010 244771300 -5916554 + AluSq SINE Alu 1 291 -22 1038 169 189 15 chr2 244771411 244771671 -5916183 + MLT1D LTR MaLR 195 499 -6 381 245 41 10 chr2 244771691 244771789 -5916065 - MIR SINE MIR -115 147 47 219 294 16 71 chr2 244771817 244772001 -5915853 + (CTGGGG)n Simple_repeat Simple_repeat 1 174 0 412 303 90 21 chr2 244772620 244772854 -5915000 + L2 LINE L2 2502 2751 -563 312 193 42 101 chr2 244773942 244774061 -5913793 - L1ME4a LINE L1 -4 6117 6006 729 132 0 16 chr2 244774081 244774098 -5913756 - AluSg/x SINE Alu -3 307 291 2338 70 6 25 chr2 244774098 244774412 -5913442 - AluY SINE Alu -3 308 1 729 132 0 16 chr2 244774412 244774515 -5913339 - AluSg/x SINE Alu -19 291 189 439 238 119 43 chr2 244774795 244774980 -5912874 + MLT1D LTR MaLR 1 199 -306 425 221 87 8 chr2 244775108 244775235 -5912619 + MLT1D LTR MaLR 365 501 -4 791 182 0 26 chr2 244777383 244777537 -5910317 + Charlie3 DNA MER1_type 1 150 -2560 248 234 16 49 chr2 244777677 244777861 -5909993 + (TTGTG)n Simple_repeat Simple_repeat 2 179 0 475 126 135 9 chr2 244777877 244777988 -5909866 + AluY SINE Alu 179 303 -8 1855 171 7 7 chr2 244778234 244778533 -5909321 - AluJo SINE Alu -13 299 1 2144 88 7 52 chr2 244779439 244779746 -5908108 + AluSc SINE Alu 1 293 -16 213 322 58 0 chr2 244781773 244781860 -5905994 - MER5A DNA MER1_type -72 117 26 791 249 117 0 chr2 244782126 244782399 -5905455 + MLT1A1 LTR MaLR 55 359 -6 382 193 174 0 chr2 244782938 244783047 -5904807 + MER6A DNA MER2_type 1 128 -477 388 308 8 24 chr2 244783608 244783861 -5903993 - AluY SINE Alu 0 301 53 1028 170 6 16 chr2 244783866 244784048 -5903806 - AluSx SINE Alu -132 180 1 641 153 34 0 chr2 244784414 244784532 -5903322 - FLAM_A SINE Alu -11 122 1 412 291 58 63 chr2 244784626 244785004 -5902850 + LTR16A LTR ERVL 60 435 -15 205 195 0 0 chr2 244785678 244785719 -5902135 + MIR SINE MIR 110 150 -58 2479 70 7 0 chr2 244786475 244786774 -5901080 - AluY SINE Alu -10 301 1 1950 136 18 0 chr2 244786782 244787068 -5900786 - AluSx SINE Alu -21 291 1 2318 88 40 0 chr2 244787698 244787995 -5899859 + AluSg SINE Alu 1 309 -1 771 118 15 15 chr2 244787995 244788130 -5899724 + L1PB1 LINE L1 5964 6098 -53 1932 77 40 15 chr2 244789581 244789855 -5897999 + AluY SINE Alu 1 281 -30 2500 129 102 8 chr2 244790535 244791006 -5896848 + MER6A DNA MER2_type 91 605 0 22 56 0 0 chr2 244791266 244791302 -5896552 + AT_rich Low_complexity Low_complexity 1 36 0 2169 185 93 42 chr2 244793310 244793551 -5894303 - MER39 LTR ERV1 -2 705 478 2057 112 14 3 chr2 244793551 244793838 -5894016 + AluSq SINE Alu 3 292 -21 2169 185 93 42 chr2 244793838 244794222 -5893632 - MER39 LTR ERV1 -229 478 1 297 271 36 57 chr2 244795364 244795504 -5892350 + MIR3 SINE MIR 9 145 -63 1839 51 26 13 chr2 244795980 244796214 -5891640 - AluYa5 SINE Alu -74 237 1 2077 120 14 0 chr2 244796218 244796509 -5891345 - AluSx SINE Alu -17 295 1 1051 153 11 6 chr2 244796779 244796962 -5890892 + MSTB LTR MaLR 1 184 -242 1312 152 25 47 chr2 244796996 244797272 -5890582 + MSTB LTR MaLR 157 426 0 216 300 71 43 chr2 244797417 244797557 -5890297 + L3 LINE CR1 1045 1188 -389 237 274 133 26 chr2 244802894 244803007 -5884847 - MIR SINE MIR -54 208 84 246 228 18 0 chr2 244803781 244803838 -5884016 - MER5A DNA MER1_type -131 58 1 1109 136 68 6 chr2 244804636 244804813 -5883041 - AluSg/x SINE Alu -11 301 114 2120 100 57 0 chr2 244805160 244805439 -5882415 + AluSq SINE Alu 1 295 -18 1257 149 25 34 chr2 244806045 244806280 -5881574 + MER4B LTR ERV1 378 610 0 2425 81 0 13 chr2 244807664 244807973 -5879881 + AluY SINE Alu 1 305 -6 2354 74 3 12 chr2 244807973 244808311 -5879543 + L1PA6 LINE L1 5820 6154 0 57 71 0 0 chr2 244808452 244808565 -5879289 + AT_rich Low_complexity Low_complexity 1 113 0 2146 118 10 10 chr2 244808680 244808985 -5878869 - AluSx SINE Alu -7 305 1 231 146 0 0 chr2 244809190 244809231 -5878623 + (CA)n Simple_repeat Simple_repeat 2 42 0 397 262 39 10 chr2 244809260 244809363 -5878491 - MIR SINE MIR -101 161 56 2110 118 10 0 chr2 244809366 244809654 -5878200 + AluSx SINE Alu 2 292 -20 300 304 128 27 chr2 244809790 244809938 -5877916 + L1ME4a LINE L1 5951 6113 -8 576 195 140 12 chr2 244810025 244810189 -5877665 - MER58A DNA MER1_type -17 207 23 781 273 9 22 chr2 244810631 244810862 -5876992 + MLT2B1 LTR ERVL 63 290 -230 562 216 131 13 chr2 244810855 244811008 -5876846 + MLT2B2 LTR ERVL 345 515 0 * 1781 157 3 49 chr2 244811123 244811428 -5876426 + AluJo SINE Alu 1 291 -21 223 241 103 0 chr2 244811466 244811524 -5876330 - MIR SINE MIR -82 180 117 2020 181 40 21 chr2 244811576 244811997 -5875857 - MLT1C LTR MaLR -1 466 38 2071 115 3 3 chr2 244812551 244812876 -5874978 - AluSq SINE Alu 0 325 1 2230 68 7 4 chr2 244813103 244813466 -5874388 - AluY SINE Alu 0 364 1 257 243 29 0 chr2 244813513 244813583 -5874271 - MIR SINE MIR -111 151 80 682 147 0 56 chr2 244813664 244813797 -5874057 - AluSg/x SINE Alu -18 292 166 1554 111 4 53 chr2 244813797 244814040 -5873814 - AluSq SINE Alu -82 231 1 2103 124 0 0 chr2 244815141 244815423 -5872431 + AluSx SINE Alu 1 282 -30 409 105 70 29 chr2 244815447 244815619 -5872235 + (TA)n Simple_repeat Simple_repeat 2 180 0 198 144 50 36 chr2 244815632 244815771 -5872083 + (TA)n Simple_repeat Simple_repeat 2 142 0 2289 113 3 0 chr2 244817516 244817818 -5870036 - AluSx SINE Alu -9 303 1 272 130 37 0 chr2 244818127 244818181 -5869673 + C-rich Low_complexity Low_complexity 1 56 0 1586 123 9 0 chr2 244818217 244818436 -5869418 - AluSx SINE Alu -40 272 52 288 128 0 0 chr2 244818436 244818475 -5869379 - AluS SINE Alu -211 91 53 543 110 22 22 chr2 244818475 244818566 -5869288 - AluS SINE Alu -221 92 2 2403 69 3 0 chr2 244818957 244819245 -5868609 + AluSc SINE Alu 1 289 -20 2503 93 0 0 chr2 244819557 244819869 -5867985 - AluSx SINE Alu 0 312 1 2230 68 29 35 chr2 244820798 244821109 -5866745 - AluY SINE Alu -2 309 1 380 175 22 22 chr2 244824503 244824640 -5863214 + (TATG)n Simple_repeat Simple_repeat 2 138 0 180 290 21 43 chr2 244825219 244825312 -5862542 + L2 LINE L2 3179 3269 -3 698 216 56 25 chr2 244825463 244825665 -5862189 - MIR SINE MIR -21 241 34 632 278 36 21 chr2 244825670 244825864 -5861990 + MER3 DNA MER1_type 3 199 -10 2088 116 20 0 chr2 244826601 244826903 -5860951 - AluSg SINE Alu -2 308 1 193 276 112 52 chr2 244828071 244828187 -5859667 - L2 LINE L2 -25 3247 3125 1353 192 122 0 chr2 244828288 244828575 -5859279 - MLT1A1 LTR MaLR 0 365 44 2443 96 0 6 chr2 244828586 244828899 -5858955 - AluSx SINE Alu -1 311 1 202 147 0 0 chr2 244828980 244829014 -5858840 - L2 LINE L2 -224 3048 3015 191 302 77 41 chr2 244829134 244829303 -5858551 - L2 LINE L2 -554 2760 2586 2261 110 3 0 chr2 244829372 244829680 -5858174 - AluY SINE Alu -2 309 1 250 264 28 0 chr2 244829729 244829801 -5858053 + CT-rich Low_complexity Low_complexity 3 76 0 2263 129 0 0 chr2 244835579 244835890 -5851964 - AluSx SINE Alu -1 311 1 243 0 0 0 chr2 244836060 244836087 -5851767 + (TG)n Simple_repeat Simple_repeat 2 28 0 634 190 78 0 chr2 244836123 244836265 -5851589 - MLT1C LTR MaLR -10 457 305 610 132 186 0 chr2 244836789 244836918 -5850936 - MLT1C LTR MaLR -10 457 305 1113 225 49 7 chr2 244837058 244837343 -5850511 - MLT1C LTR MaLR -170 297 1 1178 109 16 21 chr2 244837371 244837563 -5850291 + MER30 DNA MER1_type 1 191 -39 342 0 0 0 chr2 244838348 244838386 -5849468 + (TTGG)n Simple_repeat Simple_repeat 3 40 0 242 321 12 12 chr2 244841632 244841716 -5846138 - MLT1K LTR MaLR -304 284 201 1405 175 61 4 chr2 244842825 244843071 -5844783 + AluJo SINE Alu 37 296 -16 618 249 145 0 chr2 244844491 244844684 -5843170 - MIR SINE MIR -14 248 28 2474 93 0 0 chr2 244844763 244845073 -5842781 - AluSx SINE Alu -2 310 1 315 298 193 0 chr2 244845286 244845457 -5842397 - MIR SINE MIR -32 230 27 2535 78 7 0 chr2 244847905 244848268 -5839586 - AluY SINE Alu 0 365 1 435 253 80 12 chr2 244848505 244848667 -5839187 - MER104 DNA Tc2 0 180 8 2221 123 0 0 chr2 244849100 244849392 -5838462 + AluSx SINE Alu 1 292 -20 303 123 14 151 chr2 244851326 244851399 -5836455 + L1MC4 LINE L1 6656 6718 -1324 2143 119 10 3 chr2 244852061 244852354 -5835500 + AluSx SINE Alu 1 295 -17 1142 132 0 6 chr2 244852354 244852521 -5835333 + AluSg/x SINE Alu 135 300 -10 306 0 0 0 chr2 244852593 244852627 -5835227 + (T)n Simple_repeat Simple_repeat 1 34 0 2220 106 7 3 chr2 244855142 244855445 -5832409 + AluSx SINE Alu 1 304 -8 290 371 35 28 chr2 244856012 244856155 -5831699 + L2 LINE L2 3122 3265 -7 1935 151 7 7 chr2 244858395 244858694 -5829160 - AluSx SINE Alu -13 299 1 232 254 32 0 chr2 244858792 244858855 -5828999 + MER58A DNA MER1_type 160 224 0 587 267 135 23 chr2 244859042 244859345 -5828509 - MLT1A1 LTR MaLR -1 364 28 2180 118 0 3 chr2 244859638 244859935 -5827919 + AluSx SINE Alu 1 296 -16 256 237 0 17 chr2 244860249 244860308 -5827546 - MIR SINE MIR -70 138 81 22 0 0 0 chr2 244860636 244860658 -5827196 + AT_rich Low_complexity Low_complexity 1 22 0 244 320 53 60 chr2 244860924 244861074 -5826780 - L2 LINE L2 -1 3271 3123 1816 161 14 0 chr2 244861669 244861954 -5825900 - AluSx SINE Alu -23 289 1 1661 132 10 54 chr2 244862868 244863163 -5824691 + MER1B DNA MER1_type 58 339 0 231 167 0 0 chr2 244864339 244864381 -5823473 + (TG)n Simple_repeat Simple_repeat 2 43 0 1893 164 7 3 chr2 244865008 244865307 -5822547 - AluSx SINE Alu -12 300 1 2642 52 0 3 chr2 244865375 244865682 -5822172 - AluY SINE Alu -5 306 1 2253 108 7 0 chr2 244866312 244866619 -5821235 + AluSx SINE Alu 1 309 -3 1651 196 0 13 chr2 244866791 244867102 -5820752 - AluJo SINE Alu -4 308 2 2235 105 3 10 chr2 244868039 244868344 -5819510 + AluSq SINE Alu 1 303 -10 2118 134 0 16 chr2 244868799 244869104 -5818750 + AluSx SINE Alu 1 300 -12 186 43 0 0 chr2 244869249 244869272 -5818582 + (TG)n Simple_repeat Simple_repeat 1 23 0 880 157 120 37 chr2 244869354 244869570 -5818284 + MER46A DNA MER2_type 1 234 -2 436 345 75 31 chr2 244869644 244869963 -5817891 - L1ME LINE L1 -355 5766 5434 250 237 229 23 chr2 244872118 244872249 -5815605 - MIR3 SINE MIR -6 202 45 1181 125 6 0 chr2 244872949 244873117 -5814737 - AluSg/x SINE Alu -10 302 134 2197 115 13 3 chr2 244873117 244873421 -5814433 - AluSq SINE Alu -6 307 1 2185 131 0 6 chr2 244873982 244874296 -5813558 - AluSx SINE Alu 0 312 1 231 186 57 29 chr2 244876234 244876304 -5811550 - L1ME4a LINE L1 -44 6077 6006 2288 85 3 28 chr2 244876325 244876644 -5811210 - AluY SINE Alu 0 311 1 746 126 0 0 chr2 244876644 244876747 -5811107 - AluSx SINE Alu -19 291 189 433 235 115 55 chr2 244877026 244877226 -5810628 + MLT1D LTR MaLR 1 212 -293 414 221 87 8 chr2 244877338 244877465 -5810389 + MLT1D LTR MaLR 365 501 -4 234 139 0 0 chr2 244877998 244878034 -5809820 + LTR10A LTR ERV1 13 48 -561 1952 121 29 35 chr2 244878186 244878500 -5809354 - AluSx SINE Alu 0 312 1 249 33 0 0 chr2 244880127 244880157 -5807697 + (TG)n Simple_repeat Simple_repeat 1 30 0 339 222 254 0 chr2 244881655 244881781 -5806073 + MER58C DNA MER1_type 56 213 -2 189 0 0 0 chr2 244882302 244882323 -5805531 + (A)n Simple_repeat Simple_repeat 1 21 0 830 199 7 0 chr2 244882324 244882465 -5805389 - FRAM SINE Alu -30 146 5 22 35 0 0 chr2 244882482 244882511 -5805343 + AT_rich Low_complexity Low_complexity 1 29 0 243 293 107 0 chr2 244882866 244882941 -5804913 + L2 LINE L2 3200 3282 -31 189 305 17 0 chr2 244883567 244883626 -5804228 - MIR SINE MIR -123 139 80 314 279 78 41 chr2 244883883 244884102 -5803752 - HAL1b LINE L1 -1053 295 69 4117 112 28 40 chr2 244887808 244888450 -5799404 - MER51A LTR ERV1 0 634 1 1549 123 0 0 chr2 244891352 244891556 -5796298 - AluSx SINE Alu -108 204 1 236 267 83 58 chr2 244893022 244893142 -5794712 + MIR SINE MIR 21 143 -119 274 197 14 28 chr2 244894036 244894107 -5793747 - MLT1B LTR MaLR -320 70 1 677 281 51 0 chr2 244894324 244894520 -5793334 - MER58A DNA MER1_type -16 208 3 351 0 0 0 chr2 244894637 244894676 -5793178 + (TG)n Simple_repeat Simple_repeat 1 39 0 181 303 93 56 chr2 244896280 244896442 -5791412 + L2 LINE L2 3083 3250 -22 311 178 0 14 chr2 244897254 244897327 -5790527 + (CA)n Simple_repeat Simple_repeat 1 72 0 306 177 16 0 chr2 244898130 244898192 -5789662 - L1MC2 LINE L1 -5 6339 6277 5002 157 42 8 chr2 244898192 244899212 -5788642 - L1MC1 LINE L1 -94 6239 5185 189 216 39 0 chr2 244900560 244900611 -5787243 + L2 LINE L2 3261 3313 0 2275 92 3 0 chr2 244903154 244903438 -5784416 - AluSp SINE Alu -28 285 1 425 301 60 6 chr2 244903653 244903836 -5784018 + MIR SINE MIR 70 262 0 1942 133 0 45 chr2 244904054 244904362 -5783492 + AluSx SINE Alu 1 294 -18 222 220 34 34 chr2 244905554 244905613 -5782241 - MER5A DNA MER1_type -1 188 130 740 144 182 0 chr2 244905617 244905749 -5782105 + FRAM SINE Alu 1 156 -20 220 339 91 36 chr2 244906689 244906910 -5780944 - L2 LINE L2 -604 2710 2478 1730 143 82 4 chr2 244907447 244907726 -5780128 + AluJo SINE Alu 1 301 -11 1849 158 6 22 chr2 244907744 244908055 -5779799 + AluSx SINE Alu 1 306 -6 34 24 0 0 chr2 244908332 244908373 -5779481 + AT_rich Low_complexity Low_complexity 1 41 0 274 339 77 8 chr2 244909329 244909459 -5778395 - L2 LINE L2 -32 3240 3102 462 306 76 35 chr2 244909809 244910126 -5777728 + MER102b DNA MER1_type 1 330 -11 2068 123 3 0 chr2 244911348 244911659 -5776195 + AluSx SINE Alu 1 312 0 1296 248 86 12 chr2 244911764 244912183 -5775671 - Charlie4a DNA MER1_type -58 450 1 218 298 48 24 chr2 244912618 244912702 -5775152 + MIR SINE MIR 177 262 0 1749 159 7 14 chr2 244912729 244913025 -5774829 - AluJb SINE Alu -18 294 1 187 303 66 0 chr2 244919142 244919218 -5768636 - L2 LINE L2 -18 3254 3174 1415 84 0 0 chr2 244919920 244920099 -5767755 + AluSg/x SINE Alu 121 299 -13 332 238 12 12 chr2 244920102 244920182 -5767672 - MLT1H LTR MaLR -62 528 449 348 278 65 18 chr2 244920339 244920508 -5767346 - MLT1H LTR MaLR -244 305 129 233 283 89 102 chr2 244920596 244920848 -5767006 - MLT1H-int LTR MaLR -30 1341 1092 2064 120 4 0 chr2 244920848 244921122 -5766732 + AluSp SINE Alu 23 297 -16 233 283 89 102 chr2 244921122 244921183 -5766671 - MLT1H-int LTR MaLR -279 1092 1032 357 218 0 11 chr2 244922008 244922095 -5765759 - MLT1H-int LTR MaLR -1627 108 23 345 309 8 8 chr2 244922116 244922239 -5765615 - MLT1G LTR MaLR -8 582 460 296 240 67 0 chr2 244922435 244922510 -5765344 + MIR SINE MIR 68 147 -115 282 252 96 35 chr2 244922615 244922730 -5765124 + MIR SINE MIR 125 246 -16 242 377 46 0 chr2 244923559 244923689 -5764165 + L3 LINE CR1 1438 1573 -4 1962 164 0 3 chr2 244924211 244924510 -5763344 - AluJb SINE Alu -14 298 1 2018 129 26 3 chr2 244924528 244924830 -5763024 - AluSc SINE Alu 0 309 1 198 103 0 0 chr2 244925284 244925313 -5762541 + (TG)n Simple_repeat Simple_repeat 1 29 0 27 0 0 0 chr2 244926716 244926743 -5761111 + AT_rich Low_complexity Low_complexity 1 27 0 2381 87 10 0 chr2 244927325 244927623 -5760231 - AluSq SINE Alu -12 301 1 26 64 0 0 chr2 244927743 244927790 -5760064 + AT_rich Low_complexity Low_complexity 1 47 0 542 260 76 100 chr2 244929576 244930087 -5757767 - MLT1J LTR MaLR -8 503 5 1625 149 60 36 chr2 244930984 244931286 -5756568 + AluJo SINE Alu 1 309 -3 192 143 63 95 chr2 244931395 244931458 -5756396 - MIR3 SINE MIR -23 185 125 1799 168 26 7 chr2 244932485 244932789 -5755065 - AluJo SINE Alu -2 310 1 778 198 9 78 chr2 244933036 244933253 -5754601 + MER20 DNA MER1_type 1 202 -17 333 250 58 19 chr2 244933551 244933655 -5754199 + MIR3 SINE MIR 12 119 -89 579 196 0 0 chr2 244935014 244935157 -5752697 + (TGG)n Simple_repeat Simple_repeat 1 143 0 2325 80 28 0 chr2 244936079 244936367 -5751487 + AluY SINE Alu 2 297 -14 215 291 25 38 chr2 244937032 244937111 -5750743 + L2 LINE L2 2238 2315 -999 551 304 55 0 chr2 244937920 244938101 -5749753 - MIR SINE MIR -39 223 33 261 0 0 0 chr2 244942023 244942052 -5745802 + (TG)n Simple_repeat Simple_repeat 2 30 0 737 232 104 38 chr2 244942582 244942871 -5744983 + L1ME2 LINE L1 5847 6154 -10 282 116 0 0 chr2 244942964 244943007 -5744847 + (CGGA)n Simple_repeat Simple_repeat 2 44 0 1985 126 3 0 chr2 244943720 244944034 -5743820 - AluSg SINE Alu 0 315 1 2258 142 3 3 chr2 244944894 244945231 -5742623 + MER1B DNA MER1_type 1 337 0 281 256 13 0 chr2 244950263 244950341 -5737513 + MER117 DNA MER1_type 14 92 -105 228 272 87 39 chr2 244950766 244950869 -5736985 + MIR SINE MIR 4 111 -151 212 298 0 0 chr2 244950915 244950972 -5736882 - L2 LINE L2 -4 3268 3212 820 279 68 19 chr2 244951052 244951360 -5736494 - MER33 DNA MER1_type -1 323 1 215 159 0 23 chr2 244952556 244952600 -5735254 + T-rich Low_complexity Low_complexity 3 45 0 1233 191 14 0 chr2 244954436 244954656 -5733198 - MLT1B LTR MaLR 0 390 168 32 26 0 0 chr2 244956931 244956970 -5730884 + AT_rich Low_complexity Low_complexity 1 39 0 250 184 0 0 chr2 244957272 244957310 -5730544 + L2 LINE L2 3259 3296 -17 273 234 94 0 chr2 244960881 244960945 -5726909 + MIR3 SINE MIR 107 176 -32 251 255 230 20 chr2 244961254 244961454 -5726400 - MIR SINE MIR 0 262 21 204 40 0 0 chr2 244962231 244962256 -5725598 + (T)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr2 244963125 244963146 -5724708 + GC_rich Low_complexity Low_complexity 1 21 0 4046 157 19 28 chr2 244964876 244965653 -5722201 - LTR1 LTR ERV1 0 785 16 1061 229 143 18 chr2 244966585 244966921 -5720933 - MLT1B LTR MaLR -12 378 1 183 238 0 0 chr2 244966921 244966963 -5720891 - MIR SINE MIR -122 86 45 261 222 139 0 chr2 244970402 244970474 -5717380 + L2 LINE L2 3212 3293 -20 377 244 30 0 chr2 244971294 244971429 -5716425 + GA-rich Low_complexity Low_complexity 4 142 0 309 240 124 25 chr2 244973125 244973246 -5714608 + HAL1 LINE L1 1569 1701 -806 216 97 0 0 chr2 244974234 244974265 -5713589 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 338 167 10 104 chr2 244974279 244974375 -5713479 + MLT1G LTR MaLR 452 538 -52 2073 94 7 24 chr2 244974382 244974679 -5713175 - AluSx SINE Alu -20 292 1 207 284 16 110 chr2 244975351 244975478 -5712376 - L2 LINE L2 -655 2659 2545 201 305 116 56 chr2 244975511 244975977 -5711877 - L2 LINE L2 -884 2430 1937 181 273 23 0 chr2 244976384 244976428 -5711426 + MIR3 SINE MIR 118 162 -46 21 0 0 0 chr2 244977068 244977089 -5710765 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 244977295 244977317 -5710537 + AT_rich Low_complexity Low_complexity 1 22 0 2132 94 7 0 chr2 244977317 244977604 -5710250 - AluSx SINE Alu -23 289 1 299 296 80 34 chr2 244979104 244979280 -5708574 + Charlie8 DNA MER1_type 1 184 -2233 1546 163 3 45 chr2 244980545 244980858 -5706996 + AluJo SINE Alu 6 305 -7 690 187 16 8 chr2 244980858 244980981 -5706873 + AluJo/FRAM SINE Alu 134 257 -55 23 33 0 0 chr2 244980981 244981011 -5706843 + AT_rich Low_complexity Low_complexity 1 30 0 1952 77 0 33 chr2 244981387 244981661 -5706193 + AluSx SINE Alu 43 307 -5 206 132 19 0 chr2 244982949 244983002 -5704852 + T-rich Low_complexity Low_complexity 2 55 0 1626 90 4 51 chr2 244983415 244983671 -5704183 - AluSq SINE Alu -69 244 1 227 208 0 19 chr2 244983683 244983736 -5704118 + CT-rich Low_complexity Low_complexity 1 52 0 998 183 74 5 chr2 244983737 244983877 -5703977 - AluJo SINE Alu -40 272 112 183 42 0 0 chr2 244983877 244983901 -5703953 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 998 183 74 5 chr2 244983901 244983962 -5703892 - AluJo SINE Alu -200 112 57 1113 237 62 16 chr2 244985098 244985349 -5702505 + MER2 DNA MER2_type 4 275 -70 2147 96 3 10 chr2 244985349 244985650 -5702204 - AluSx SINE Alu -13 299 1 1113 237 62 16 chr2 244985650 244985719 -5702135 + MER2 DNA MER2_type 275 339 -6 216 0 0 0 chr2 244985757 244985781 -5702073 + (CAG)n Simple_repeat Simple_repeat 1 24 0 673 188 0 16 chr2 244985781 244985909 -5701945 - FLAM_C SINE Alu -16 127 2 735 289 98 32 chr2 244985988 244986511 -5701343 - L1ME4a LINE L1 -73 6048 5492 1370 124 5 9 chr2 244989399 244989617 -5698237 + AluJo SINE Alu 82 298 -14 2002 100 42 3 chr2 244991059 244991348 -5696506 - AluSx SINE Alu -12 300 1 238 281 42 42 chr2 244991615 244991711 -5696143 + L3 LINE CR1 1465 1560 -17 461 232 10 10 chr2 244991962 244992061 -5695793 + MER81 DNA DNA 1 99 -15 2103 108 10 3 chr2 244992768 244993063 -5694791 + AluSq SINE Alu 1 297 -16 2324 84 0 3 chr2 244993473 244993784 -5694070 + AluY SINE Alu 1 310 -1 1736 162 41 0 chr2 244993926 244994216 -5693638 + AluSx SINE Alu 1 302 -10 1995 123 0 0 chr2 244994926 244995219 -5692635 + AluSx SINE Alu 1 293 -19 403 245 84 28 chr2 244995533 244995676 -5692178 - MIR SINE MIR -70 192 42 1023 90 28 0 chr2 244995742 244995755 -5692099 - AluSq/x SINE Alu -164 149 138 1826 161 7 0 chr2 244995755 244996060 -5691794 - AluSx SINE Alu -5 307 1 1023 90 28 0 chr2 244996060 244996191 -5691663 - AluSq/x SINE Alu -175 138 1 1701 174 10 10 chr2 244996420 244996731 -5691123 - AluSx SINE Alu 0 312 2 367 186 71 0 chr2 244996733 244996803 -5691051 - MER5A DNA MER1_type -113 76 2 1942 115 14 0 chr2 244997208 244997495 -5690359 - AluSp SINE Alu 0 313 23 24 32 0 0 chr2 244997987 244998018 -5689836 + AT_rich Low_complexity Low_complexity 1 31 0 305 291 44 53 chr2 244998270 244998497 -5689357 + L1ME LINE L1 5548 5772 -349 1197 48 0 0 chr2 244998700 244998845 -5689009 - AluY SINE Alu -11 300 156 2083 248 34 28 chr2 244998849 244999478 -5688376 - L1MD1 LINE L1 -2 7804 6083 250 344 0 17 chr2 244999709 244999889 -5687965 + GA-rich Low_complexity Low_complexity 2 178 0 560 179 0 9 chr2 245000646 245000752 -5687102 - FLAM_A SINE Alu -37 105 1 284 200 17 17 chr2 245000833 245000893 -5686961 - MIR SINE MIR -61 147 88 370 273 115 48 chr2 245001186 245001351 -5686503 - MIR SINE MIR -70 192 17 1563 91 62 4 chr2 245003085 245003327 -5684527 + L1MA1 LINE L1 6047 6302 0 2021 78 36 14 chr2 245003774 245004055 -5683799 - AluSg SINE Alu -23 287 1 229 222 14 56 chr2 245004405 245004477 -5683377 - MLT1H LTR MaLR -421 128 60 265 220 230 20 chr2 245005573 245005673 -5682181 + L2 LINE L2 3188 3308 -5 433 248 51 8 chr2 245005678 245005795 -5682059 - MIR SINE MIR -75 187 66 265 203 0 31 chr2 245058055 245058119 -5629735 + (CAGAGA)n Simple_repeat Simple_repeat 2 63 0 278 326 52 35 chr2 245058720 245058892 -5628962 - MER5A DNA MER1_type -7 182 8 180 0 0 0 chr2 245059029 245059049 -5628805 + (CAGGC)n Simple_repeat Simple_repeat 5 24 0 930 10 0 0 chr2 245059175 245059278 -5628576 - L1PA5 LINE L1 -13 6141 6039 1509 210 93 17 chr2 245059716 245060135 -5627719 - MLT1C LTR MaLR 0 467 17 2161 103 17 0 chr2 245060137 245060438 -5627416 - AluSx SINE Alu -6 306 1 833 213 0 12 chr2 245061018 245061187 -5626667 - AluJo SINE Alu -59 253 87 358 297 67 48 chr2 245061292 245061457 -5626397 + MIR SINE MIR 2 169 -93 182 293 49 12 chr2 245062009 245062091 -5625763 - MIR SINE MIR -12 250 166 188 271 21 0 chr2 245062486 245062534 -5625320 - L2 LINE L2 -35 3237 3189 614 271 135 22 chr2 245062669 245062898 -5624956 + MIR SINE MIR 2 256 -6 2002 118 0 16 chr2 245063654 245063960 -5623894 + AluSq SINE Alu 1 301 -12 683 206 212 5 chr2 245064051 245064235 -5623619 - MIR SINE MIR -24 238 17 690 261 177 6 chr2 245065071 245065382 -5622472 + L2 LINE L2 2950 3313 0 1073 153 0 0 chr2 245065873 245066049 -5621805 - AluSg/x SINE Alu 0 312 137 452 231 160 76 chr2 245066051 245066276 -5621578 + Charlie8 DNA MER1_type 53 296 -2121 1231 252 51 27 chr2 245066963 245067450 -5620404 - MLT1G3 LTR MaLR -61 495 1 264 343 67 14 chr2 245067452 245067662 -5620192 - L2 LINE L2 -144 3169 2949 572 175 0 0 chr2 245068084 245068181 -5619673 + FLAM_A SINE Alu 37 133 -9 470 289 86 0 chr2 245068843 245069040 -5618814 + MIR SINE MIR 14 227 -35 246 273 50 20 chr2 245069956 245070055 -5617799 + L2 LINE L2 3179 3280 -33 2181 94 3 7 chr2 245071404 245071713 -5616141 + AluSg SINE Alu 1 308 -2 23 0 0 0 chr2 245071778 245071801 -5616053 + AT_rich Low_complexity Low_complexity 1 23 0 1964 149 3 0 chr2 245071851 245072159 -5615695 + AluSx SINE Alu 1 309 -3 2111 98 10 0 chr2 245073710 245074005 -5613849 - AluSp SINE Alu -15 298 1 231 301 65 49 chr2 245075097 245075220 -5612634 + MIR SINE MIR 119 243 -19 449 188 0 10 chr2 245075251 245075352 -5612502 + (TGG)n Simple_repeat Simple_repeat 1 100 0 331 259 11 14 chr2 245075372 245075663 -5612191 + (TGG)n Simple_repeat Simple_repeat 1 290 0 2190 107 0 13 chr2 245076445 245076753 -5611101 + AluSx SINE Alu 2 305 -7 2228 56 35 0 chr2 245077943 245078228 -5609626 + AluY SINE Alu 1 295 -16 1822 131 11 3 chr2 245078266 245078601 -5609253 - AluJb SINE Alu 0 337 1 324 288 162 11 chr2 245079059 245079250 -5608604 - LTR33 LTR ERVL -237 284 65 235 346 90 26 chr2 245079987 245080331 -5607523 + L3 LINE CR1 1106 1471 -106 325 302 54 40 chr2 245080628 245080770 -5607084 - MIR SINE MIR -47 161 10 196 321 54 96 chr2 245081321 245081561 -5606293 - L2 LINE L2 -1 3271 3042 22 0 0 0 chr2 245081782 245081804 -5606050 + AT_rich Low_complexity Low_complexity 1 22 0 1539 196 25 79 chr2 245084365 245084758 -5603096 - MLT1A2 LTR MaLR 0 374 3 180 77 0 0 chr2 245084807 245084833 -5603021 + (CCCA)n Simple_repeat Simple_repeat 1 26 0 295 265 59 66 chr2 245085000 245085139 -5602715 - MIR SINE MIR -67 195 58 571 263 0 8 chr2 245085661 245085794 -5602060 - FLAM_C SINE Alu 0 133 2 216 0 0 0 chr2 245087975 245087999 -5599855 + (CA)n Simple_repeat Simple_repeat 2 25 0 706 231 57 33 chr2 245088129 245088341 -5599513 - MIR SINE MIR 0 262 46 268 331 0 38 chr2 245089914 245090071 -5597783 + T-rich Low_complexity Low_complexity 3 153 0 1729 185 32 3 chr2 245090085 245090399 -5597455 + MER7A DNA MER2_type 1 321 -25 2564 185 59 35 chr2 245090422 245090999 -5596855 - L1MB4 LINE L1 -18 6162 5572 15261 113 24 31 chr2 245090999 245093633 -5594221 - L1PA8A LINE L1 0 6131 3521 297 0 0 0 chr2 245093633 245093666 -5594188 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 15261 113 24 31 chr2 245093666 245094334 -5593520 - L1PA8A LINE L1 -2610 3521 2849 2021 135 0 3 chr2 245094556 245094867 -5592987 - AluSx SINE Alu -2 310 1 277 240 8 41 chr2 245096660 245096781 -5591073 + (ATG)n Simple_repeat Simple_repeat 3 119 0 687 190 6 11 chr2 245096793 245096972 -5590882 + (TGG)n Simple_repeat Simple_repeat 1 178 0 613 153 0 15 chr2 245096993 245097124 -5590730 + (TGG)n Simple_repeat Simple_repeat 1 129 0 1017 185 24 28 chr2 245097607 245097818 -5590036 - MER6B DNA MER2_type 0 210 1 515 193 28 0 chr2 245098381 245098490 -5589364 + MLT1C LTR MaLR 1 112 -355 195 331 102 8 chr2 245098908 245099035 -5588819 - L2 LINE L2 -706 2608 2470 359 327 117 31 chr2 245099121 245099344 -5588510 - L1ME4a LINE L1 -202 5919 5678 259 211 197 0 chr2 245099585 245099661 -5588193 - L2 LINE L2 -2 3270 3180 21 0 0 0 chr2 245100202 245100223 -5587631 + AT_rich Low_complexity Low_complexity 1 21 0 1992 135 0 7 chr2 245100476 245100757 -5587097 - AluSx SINE Alu -33 279 1 4454 205 52 47 chr2 245102426 245102552 -5585302 - L1MC3 LINE L1 -9 7776 7652 1924 145 24 3 chr2 245102552 245102849 -5585005 - AluSx SINE Alu -5 307 5 4454 205 52 47 chr2 245102849 245103945 -5583909 - L1MC3 LINE L1 -133 7652 6548 21 57 0 0 chr2 245107562 245107597 -5580257 + AT_rich Low_complexity Low_complexity 1 35 0 1367 95 0 16 chr2 245108291 245108480 -5579374 + AluY SINE Alu 116 301 -10 23 33 0 0 chr2 245109132 245109162 -5578692 + AT_rich Low_complexity Low_complexity 1 30 0 243 0 0 0 chr2 245110177 245110204 -5577650 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1684 101 135 0 chr2 245110207 245110444 -5577410 - AluSx SINE Alu -28 284 16 203 172 0 35 chr2 245112130 245112188 -5575666 + T-rich Low_complexity Low_complexity 1 56 0 2335 93 0 13 chr2 245114420 245114722 -5573132 + AluSx SINE Alu 1 298 -14 26 0 0 0 chr2 245114732 245114758 -5573096 + AT_rich Low_complexity Low_complexity 1 26 0 330 315 113 0 chr2 245115196 245115341 -5572513 - MIR SINE MIR -64 144 38 199 270 62 102 chr2 245116633 245116859 -5570995 - L2 LINE L2 -31 3241 3025 182 350 0 0 chr2 245116938 245116998 -5570856 - MIR SINE MIR -59 149 90 500 325 52 0 chr2 245117450 245117641 -5570213 + MIR SINE MIR 23 223 -39 537 316 33 14 chr2 245117891 245118106 -5569748 + MIR SINE MIR 15 233 -29 2317 120 0 0 chr2 245118297 245118598 -5569256 + AluSx SINE Alu 1 301 -11 2176 123 13 0 chr2 245119190 245119492 -5568362 + AluJb SINE Alu 1 306 -6 1773 172 0 10 chr2 245119949 245120251 -5567603 - AluSx SINE Alu -13 299 1 286 323 10 0 chr2 245120536 245120632 -5567222 + MER117 DNA MER1_type 1 97 -100 259 319 54 31 chr2 245120705 245120836 -5567018 - MIR3 SINE MIR -53 155 22 197 351 175 13 chr2 245121223 245121377 -5566477 + MIR3 SINE MIR 17 195 -13 2277 111 6 19 chr2 245121435 245121750 -5566104 - AluSx SINE Alu -1 311 1 1128 96 0 0 chr2 245123169 245123315 -5564539 + AluSg/x SINE Alu 135 280 -30 363 44 0 0 chr2 245123315 245123360 -5564494 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 2320 108 0 0 chr2 245123861 245124166 -5563688 + AluSx SINE Alu 2 306 -6 324 316 71 46 chr2 245125942 245126334 -5561520 - L1M4 LINE L1 -1800 4346 3945 2194 107 3 35 chr2 245126691 245127001 -5560853 - AluSx SINE Alu -12 300 1 1562 201 19 7 chr2 245127087 245127450 -5560404 - AluJb SINE Alu 0 367 1 910 92 0 17 chr2 245127607 245127727 -5560127 - AluSq/x SINE Alu -195 118 1 258 352 128 33 chr2 245128269 245128752 -5559102 - L2 LINE L2 -746 2568 2040 231 289 58 10 chr2 245128791 245128895 -5558959 - MER117 DNA MER1_type -38 159 51 181 143 0 0 chr2 245128956 245128984 -5558870 - L3 LINE CR1 -8 1569 1542 446 301 13 39 chr2 245129553 245129706 -5558148 - L3 LINE CR1 -848 729 581 2229 115 3 3 chr2 245130376 245130672 -5557182 + AluSx SINE Alu 1 296 -16 1463 199 47 7 chr2 245132765 245133041 -5554813 + AluJb SINE Alu 1 287 -25 216 375 45 23 chr2 245133157 245133333 -5554521 - MIR SINE MIR -13 249 70 379 136 17 0 chr2 245134664 245134723 -5553131 + U7 snRNA snRNA 3 62 -1 1420 164 43 72 chr2 245134815 245135120 -5552734 - AluJo SINE Alu -16 296 1 183 156 22 67 chr2 245135717 245135762 -5552092 - L2 LINE L2 -77 3195 3153 285 29 0 0 chr2 245136228 245136262 -5551592 + (TG)n Simple_repeat Simple_repeat 1 34 0 1651 148 32 14 chr2 245136575 245136852 -5551002 + AluJo SINE Alu 1 282 -30 1066 274 69 13 chr2 245136878 245137356 -5550498 + L1ME4a LINE L1 5607 6111 -10 1021 164 6 6 chr2 245137376 245137553 -5550301 + FRAM SINE Alu 1 176 0 503 157 12 0 chr2 245138559 245138642 -5549212 + AluJo SINE Alu 68 151 -161 21 57 0 0 chr2 245138678 245138713 -5549141 + AT_rich Low_complexity Low_complexity 1 35 0 413 312 70 7 chr2 245140261 245140481 -5547373 - MIR SINE MIR -12 250 14 349 347 61 10 chr2 245140504 245140801 -5547053 + L1ME LINE L1 5457 5768 -353 2299 97 21 0 chr2 245140859 245141149 -5546705 + AluSx SINE Alu 3 298 -14 198 0 0 0 chr2 245142180 245142202 -5545652 + (CA)n Simple_repeat Simple_repeat 1 22 0 265 122 0 0 chr2 245142300 245142341 -5545513 - AluJo SINE Alu -18 284 244 1452 191 0 4 chr2 245142376 245142628 -5545226 - AluJo SINE Alu -61 251 1 271 158 20 89 chr2 245142632 245142733 -5545121 + L2 LINE L2 3159 3252 -61 357 315 103 5 chr2 245142778 245142962 -5544892 - MIR SINE MIR 0 262 61 228 310 169 14 chr2 245143684 245143968 -5543886 - L2 LINE L2 -573 2741 2414 1635 143 94 4 chr2 245144261 245144526 -5543328 + AluJo SINE Alu 1 289 -23 2228 103 10 16 chr2 245145005 245145315 -5542539 - AluSx SINE Alu -4 308 1 180 152 0 0 chr2 245150666 245150699 -5537155 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 192 245 0 0 chr2 245151891 245151944 -5535910 + A-rich Low_complexity Low_complexity 1 53 0 2099 133 7 0 chr2 245154532 245154818 -5533036 - AluSx SINE Alu -24 288 1 604 188 145 7 chr2 245155439 245155577 -5532277 + MER5A DNA MER1_type 32 188 -1 2021 213 63 11 chr2 245155769 245156290 -5531564 + L1MB7 LINE L1 3775 4322 -1824 961 183 0 12 chr2 245156290 245156454 -5531400 + FRAM SINE Alu 1 159 -17 792 199 0 0 chr2 245156454 245156585 -5531269 + FLAM_C SINE Alu 1 131 -2 3598 208 61 52 chr2 245156586 245157237 -5530617 + L1MB7 LINE L1 4321 4965 -1219 2094 105 4 0 chr2 245157237 245157504 -5530350 + AluSx SINE Alu 19 286 -26 3598 208 61 52 chr2 245157504 245157820 -5530034 + L1MB7 LINE L1 4965 5277 -907 2001 142 0 29 chr2 245157820 245158136 -5529718 + AluJb SINE Alu 5 311 -1 3598 208 61 52 chr2 245158136 245158189 -5529665 + L1MB7 LINE L1 5277 5328 -856 1759 197 0 3 chr2 245158189 245158499 -5529355 + AluJo SINE Alu 1 309 -3 3598 208 61 52 chr2 245158499 245159284 -5528570 + L1MB7 LINE L1 5328 6160 -24 234 0 0 0 chr2 245159846 245159872 -5527982 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1517 185 26 16 chr2 245159874 245160052 -5527802 - AluJo SINE Alu -1 311 136 287 0 53 0 chr2 245160052 245160090 -5527764 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 2170 108 0 4 chr2 245160090 245160369 -5527485 - AluSg1 SINE Alu -31 278 1 1517 185 26 16 chr2 245160369 245160497 -5527357 - AluJo SINE Alu -175 137 1 2026 113 18 3 chr2 245160508 245160790 -5527064 - AluSq SINE Alu -17 296 11 206 326 23 0 chr2 245160814 245160900 -5526954 - L2 LINE L2 -817 2497 2410 203 298 36 24 chr2 245161498 245161582 -5526272 - MIR SINE MIR -68 140 56 2046 130 0 20 chr2 245161725 245162026 -5525828 + AluSx SINE Alu 9 303 -9 2100 146 7 0 chr2 245163627 245163935 -5523919 - AluSx SINE Alu -2 310 1 788 264 101 14 chr2 245164084 245164360 -5523494 - L1ME2 LINE L1 -9 6155 5856 634 259 40 30 chr2 245164514 245164715 -5523139 + MIR SINE MIR 16 218 -44 2264 119 3 0 chr2 245165399 245165694 -5522160 + AluSx SINE Alu 1 296 -16 518 223 25 0 chr2 245165807 245165928 -5521926 + L1ME1 LINE L1 5530 5653 -468 2776 16 7 0 chr2 245165928 245166231 -5521623 + AluY SINE Alu 1 305 -6 2295 120 0 0 chr2 245166256 245166557 -5521297 + AluSg SINE Alu 1 301 -9 2267 109 0 0 chr2 245166837 245167131 -5520723 - AluSx SINE Alu -16 296 3 2348 207 39 39 chr2 245167789 245168383 -5519471 + L1MB8 LINE L1 5585 6178 0 207 0 0 0 chr2 245169535 245169558 -5518296 + (T)n Simple_repeat Simple_repeat 1 23 0 2283 85 0 17 chr2 245169571 245169866 -5517988 + AluSc SINE Alu 3 292 -17 1485 178 3 73 chr2 245169866 245170169 -5517685 - AluJo SINE Alu -30 282 1 946 227 53 14 chr2 245170228 245170402 -5517452 - MER33 DNA MER1_type -2265 320 129 2264 96 10 3 chr2 245170402 245170704 -5517150 - AluSg SINE Alu -6 304 1 946 227 53 14 chr2 245170704 245170811 -5517043 - MER33 DNA MER1_type -2456 129 28 344 179 24 12 chr2 245171387 245171471 -5516383 + MER20 DNA MER1_type 5 89 -130 701 273 57 25 chr2 245172165 245172182 -5515672 + L1ME1 LINE L1 5869 5884 -282 1815 178 7 0 chr2 245172182 245172474 -5515380 + AluJb SINE Alu 1 294 -18 701 273 57 25 chr2 245172474 245172738 -5515116 + L1ME1 LINE L1 5884 6159 -7 2141 117 17 0 chr2 245173577 245173867 -5513987 + AluSx SINE Alu 1 295 -17 1932 147 3 29 chr2 245174239 245174553 -5513301 + AluJb SINE Alu 7 312 0 435 275 70 63 chr2 245174677 245174733 -5513121 - L1ME2 LINE L1 -236 5885 5831 2400 85 7 0 chr2 245174733 245175028 -5512826 - AluSx SINE Alu -15 297 1 435 275 70 63 chr2 245175028 245175302 -5512552 - L1ME2 LINE L1 -290 5831 5553 1161 220 45 72 chr2 245175411 245175447 -5512407 - MLT2C1 LTR ERVL 0 397 362 333 0 0 0 chr2 245175447 245175484 -5512370 + (TG)n Simple_repeat Simple_repeat 2 38 0 1161 220 45 72 chr2 245175484 245175565 -5512289 - MLT2C1 LTR ERVL -35 362 280 279 79 0 0 chr2 245175565 245175603 -5512251 + (TG)n Simple_repeat Simple_repeat 2 39 0 1161 220 45 72 chr2 245175603 245175888 -5511966 - MLT2C1 LTR ERVL -117 280 5 224 125 472 0 chr2 245176540 245176612 -5511242 - L2 LINE L2 -30 3242 3137 309 277 11 32 chr2 245176631 245176647 -5511207 - L1MCa LINE L1 -4343 2083 2068 1881 128 20 53 chr2 245176647 245176951 -5510903 + AluJo SINE Alu 1 294 -18 309 277 11 32 chr2 245176951 245177028 -5510826 - L1MCa LINE L1 -4358 2068 1992 1398 246 64 14 chr2 245177274 245177709 -5510145 - LTR40b LTR ERVL -5 457 1 1851 160 176 23 chr2 245178017 245178454 -5509400 - MLT1D LTR MaLR -1 504 1 2135 113 0 3 chr2 245180001 245180283 -5507571 + AluSq SINE Alu 1 281 -32 2370 90 10 0 chr2 245180283 245180583 -5507271 + AluSp SINE Alu 1 303 -10 222 191 0 0 chr2 245181299 245181346 -5506508 + (CA)n Simple_repeat Simple_repeat 1 47 0 2157 129 3 3 chr2 245182031 245182333 -5505521 + AluSq SINE Alu 2 303 -10 2559 68 0 10 chr2 245182342 245182650 -5505204 + AluSg SINE Alu 1 305 -5 2120 99 7 0 chr2 245188131 245188445 -5499409 - AluSq SINE Alu 0 316 1 2998 190 72 43 chr2 245188792 245188896 -5498958 + L1MD2 LINE L1 5566 5666 -693 1908 143 13 7 chr2 245188896 245189197 -5498657 + AluJo SINE Alu 1 303 -9 2998 190 72 43 chr2 245189197 245189788 -5498066 + L1MD2 LINE L1 5666 6287 -72 2386 84 3 3 chr2 245189788 245190099 -5497755 - AluY SINE Alu 0 311 1 2998 190 72 43 chr2 245190099 245190164 -5497690 + L1MD2 LINE L1 6287 6349 -10 949 245 106 98 chr2 245190189 245191049 -5496805 + L1MC4 LINE L1 6799 7665 -377 1932 142 73 73 chr2 245191132 245191582 -5496272 - Ricksha DNA DNA -9 3237 2788 674 203 0 16 chr2 245191591 245191714 -5496140 + FLAM_A SINE Alu 11 131 -11 480 113 160 66 chr2 245191723 245191767 -5496087 - Ricksha DNA DNA -453 2401 2363 1840 156 21 0 chr2 245191767 245192056 -5495798 - AluJb SINE Alu -15 297 3 480 113 160 66 chr2 245192056 245192117 -5495737 - Ricksha DNA DNA -491 2363 2286 551 146 0 0 chr2 245192119 245192208 -5495646 + Ricksha DNA DNA 2084 2172 -1074 1602 164 7 50 chr2 245192211 245192510 -5495344 + AluJb SINE Alu 3 288 -24 1934 149 0 0 chr2 245192522 245192803 -5495051 + AluJb SINE Alu 1 281 -31 890 143 0 0 chr2 245192804 245192937 -5494917 + FLAM_C SINE Alu 1 133 0 4240 147 55 37 chr2 245193038 245193626 -5494228 - Ricksha DNA DNA -607 2644 2068 2198 112 3 3 chr2 245193626 245193920 -5493934 + AluSx SINE Alu 1 294 -18 4240 147 55 37 chr2 245193920 245193973 -5493881 - Ricksha DNA DNA -1183 2068 2017 2190 115 13 16 chr2 245193973 245194287 -5493567 - AluSq SINE Alu 0 313 1 4240 147 55 37 chr2 245194287 245194555 -5493299 - Ricksha DNA DNA -1234 2017 1633 448 83 0 0 chr2 245194545 245194605 -5493249 - Ricksha DNA DNA -1986 60 1 * 226 200 0 0 chr2 245194738 245194788 -5493066 - L1MB3 LINE L1 -1 6182 6133 1800 87 4 4 chr2 245194789 245195020 -5492834 - AluSc SINE Alu 0 309 79 514 141 0 0 chr2 245195020 245195098 -5492756 + AluS SINE Alu 1 78 -233 2364 176 55 53 chr2 245195098 245195667 -5492187 - L1MB3 LINE L1 -45 6138 5569 1671 163 28 0 chr2 245195702 245195985 -5491869 + AluSx SINE Alu 1 291 -21 1584 145 30 24 chr2 245196018 245196314 -5491540 - AluJo SINE Alu -1 311 14 1809 160 23 10 chr2 245196465 245196772 -5491082 - AluJo SINE Alu -1 311 1 2285 76 10 10 chr2 245197024 245197325 -5490529 + AluY SINE Alu 1 301 -10 443 224 82 45 chr2 245197568 245197608 -5490246 - MER45A DNA AcHobo -1442 139 102 2234 126 0 0 chr2 245197608 245197909 -5489945 + AluSx SINE Alu 1 301 -11 443 224 82 45 chr2 245197909 245198002 -5489852 - MER45A DNA AcHobo -1479 102 1 1995 134 0 16 chr2 245198393 245198700 -5489154 + AluSx SINE Alu 1 302 -10 2119 120 0 16 chr2 245199841 245199977 -5487877 + AluSx SINE Alu 1 138 -174 2430 53 0 3 chr2 245199977 245200279 -5487575 + AluY SINE Alu 1 301 -10 2119 120 0 16 chr2 245200279 245200459 -5487395 + AluSx SINE Alu 138 312 0 312 68 68 0 chr2 245201330 245201389 -5486465 + T-rich Low_complexity Low_complexity 3 65 0 1941 125 10 22 chr2 245201391 245201704 -5486150 - AluSg SINE Alu -1 309 1 198 319 159 0 chr2 245201768 245201881 -5485973 - MIR SINE MIR -12 250 120 2041 92 0 36 chr2 245202447 245202752 -5485102 + AluSg SINE Alu 1 294 -16 1147 228 78 33 chr2 245203213 245203387 -5484467 - MLT1A1 LTR MaLR -18 449 284 2031 61 6 121 chr2 245203387 245203733 -5484121 - AluY SINE Alu -5 306 1 1147 228 78 33 chr2 245203733 245203879 -5483975 - MLT1A1 LTR MaLR -183 284 15 34 0 0 0 chr2 245207246 245207280 -5480574 + AT_rich Low_complexity Low_complexity 1 34 0 358 350 86 0 chr2 245207525 245207688 -5480166 + MER3 DNA MER1_type 32 208 -1 414 222 89 78 chr2 245207921 245208049 -5479805 + MIR SINE MIR 77 209 -53 1685 102 0 185 chr2 245208049 245208411 -5479443 + AluJo SINE Alu 1 295 -7 414 222 89 78 chr2 245208411 245208462 -5479392 + MIR SINE MIR 209 258 -4 1844 201 3 8 chr2 245208630 245208988 -5478866 - MLT1A1 LTR MaLR 0 365 10 1143 214 143 11 chr2 245209085 245209351 -5478503 + AluJo SINE Alu 2 302 0 1689 154 44 7 chr2 245209354 245209647 -5478207 + AluJb SINE Alu 1 304 -8 2187 123 0 0 chr2 245209969 245210279 -5477575 + AluSx SINE Alu 1 310 -2 2223 84 3 3 chr2 245210976 245211274 -5476580 - AluSg SINE Alu -12 298 1 1400 227 55 42 chr2 245212284 245212668 -5475186 - MLT1B LTR MaLR -1 389 1 217 244 64 26 chr2 245213125 245213203 -5474651 - MIR SINE MIR -77 185 105 2058 128 0 3 chr2 245213635 245213941 -5473913 - AluSx SINE Alu -7 305 1 823 139 0 23 chr2 245213947 245214076 -5473778 - AluSp/q SINE Alu -12 301 176 4633 129 6 19 chr2 245214141 245214190 -5473664 - L1PB1 LINE L1 -3 6148 6100 2014 116 10 0 chr2 245214190 245214482 -5473372 - AluSx SINE Alu -17 295 1 4633 129 6 19 chr2 245214482 245215163 -5472691 - L1PB1 LINE L1 -51 6100 5428 2431 80 3 0 chr2 245216211 245216522 -5471332 - AluSx SINE Alu 0 312 1 450 218 245 0 chr2 245217720 245217867 -5469987 - MER5A DNA MER1_type 0 189 7 2352 80 0 0 chr2 245219130 245219431 -5468423 - AluSg SINE Alu -9 301 1 1538 175 54 67 chr2 245219564 245219794 -5468060 - MLT1B LTR MaLR -5 385 160 1288 228 10 7 chr2 245219794 245220083 -5467771 - AluJo SINE Alu -22 290 1 1538 175 54 67 chr2 245220083 245220223 -5467631 - MLT1B LTR MaLR -230 160 20 2246 89 0 7 chr2 245220513 245220815 -5467039 - AluSg SINE Alu -10 300 1 1250 162 4 35 chr2 245220924 245221153 -5466701 - AluJb SINE Alu -30 282 61 381 216 88 34 chr2 245221276 245221424 -5466430 + L1ME4a LINE L1 5939 6094 -27 291 331 24 48 chr2 245225443 245225609 -5462245 - L3 LINE CR1 -803 774 613 196 237 59 35 chr2 245225597 245225702 -5462152 + MIR SINE MIR 37 141 -67 * 186 71 0 0 chr2 245229647 245229675 -5458179 + (T)n Simple_repeat Simple_repeat 1 28 0 2064 130 0 0 chr2 245230127 245230420 -5457434 + AluSx SINE Alu 1 293 -19 1936 133 3 3 chr2 245230808 245231101 -5456753 + AluSx SINE Alu 1 293 -19 493 313 67 38 chr2 245231142 245231487 -5456367 - MLT1J LTR MaLR -49 462 108 376 251 236 18 chr2 245232081 245232467 -5455387 + L1ME4a LINE L1 5628 6097 -24 1982 154 87 0 chr2 245232467 245232799 -5455055 + MER46B DNA MER2_type 1 236 0 1732 151 6 38 chr2 245232971 245233097 -5454757 + AluJo SINE Alu 3 131 -181 2357 94 0 0 chr2 245233097 245233406 -5454448 - AluY SINE Alu -2 309 1 1732 151 6 38 chr2 245233406 245233596 -5454258 + AluJo SINE Alu 131 309 -3 369 0 0 0 chr2 245234872 245234913 -5452941 + (CA)n Simple_repeat Simple_repeat 1 41 0 910 173 51 0 chr2 245235187 245235343 -5452511 - AluJb SINE Alu -142 170 7 288 0 0 0 chr2 245237073 245237105 -5450749 + (TG)n Simple_repeat Simple_repeat 2 33 0 236 287 0 0 chr2 245237616 245237703 -5450151 + (CA)n Simple_repeat Simple_repeat 1 87 0 33 25 0 0 chr2 245239706 245239746 -5448108 + AT_rich Low_complexity Low_complexity 1 40 0 378 0 0 0 chr2 245241544 245241586 -5446268 + (CA)n Simple_repeat Simple_repeat 2 43 0 794 175 7 22 chr2 245243179 245243316 -5444538 + AluJo SINE Alu 2 136 -176 2009 132 3 0 chr2 245243323 245243618 -5444236 - AluSx SINE Alu -15 297 2 401 323 86 23 chr2 245243633 245243853 -5444001 + L1MC5 LINE L1 7507 7740 -221 303 326 12 0 chr2 245243874 245243960 -5443894 + L1MC4 LINE L1 7941 8027 -15 2154 114 10 3 chr2 245244134 245244442 -5443412 - AluSx SINE Alu 0 312 3 417 232 62 6 chr2 245244716 245244893 -5442961 - Charlie2 DNA MER1_type -3 2859 2673 29 0 0 0 chr2 245244899 245244928 -5442926 + AT_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chr2 245245010 245245030 -5442824 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2061 104 0 17 chr2 245245033 245245332 -5442522 - AluSx SINE Alu -18 294 1 1681 142 26 36 chr2 245245370 245245672 -5442182 - AluJo SINE Alu -13 299 1 2018 124 7 10 chr2 245245704 245246011 -5441843 - AluSx SINE Alu -5 307 2 180 0 0 0 chr2 245247156 245247176 -5440678 + (GGCTG)n Simple_repeat Simple_repeat 3 22 0 1359 156 41 0 chr2 245249778 245249996 -5437858 - AluSx SINE Alu -85 227 1 1661 167 51 11 chr2 245250021 245250297 -5437557 - AluJo SINE Alu -21 291 5 2241 98 7 33 chr2 245250520 245250827 -5437027 - AluSx SINE Alu -13 299 1 373 316 48 5 chr2 245250880 245251067 -5436787 - L1MC4 LINE L1 -218 7824 7630 427 285 161 0 chr2 245251164 245251350 -5436504 - L1MC/D LINE L1 -2280 5528 5313 979 141 7 0 chr2 245251355 245251504 -5436350 - FRAM SINE Alu 0 40 1 329 277 96 92 chr2 245251544 245251711 -5436143 - L1MC/D LINE L1 -884 5262 5092 2119 121 0 34 chr2 245251711 245252034 -5435820 + AluSq SINE Alu 1 312 -1 329 277 96 92 chr2 245252034 245252148 -5435706 - L1MC/D LINE L1 -1054 5092 4980 350 295 7 29 chr2 245252219 245252334 -5435520 + L1MC4a LINE L1 5769 5882 -1926 2055 137 7 3 chr2 245252334 245252634 -5435220 + AluJb SINE Alu 1 301 -11 350 295 7 29 chr2 245252634 245252657 -5435197 + L1MC4a LINE L1 5882 5904 -1904 598 283 88 0 chr2 245252737 245252942 -5434912 + L2 LINE L2 2067 2289 -1025 536 284 116 59 chr2 245252964 245253352 -5434502 - MLT1L LTR MaLR -6 609 200 290 236 0 0 chr2 245253323 245253378 -5434476 - MLT1J2 LTR MaLR -324 126 72 * 688 298 142 43 chr2 245253468 245253809 -5434045 + L2 LINE L2 2305 2611 -702 2269 103 7 7 chr2 245253809 245254109 -5433745 + AluSx SINE Alu 1 300 -12 688 298 142 43 chr2 245254109 245254352 -5433502 + L2 LINE L2 2611 2829 -484 189 74 0 0 chr2 245254352 245254379 -5433475 + (CCCCCG)n Simple_repeat Simple_repeat 3 29 0 688 298 142 43 chr2 245254379 245254703 -5433151 + L2 LINE L2 2829 3309 -4 1610 109 52 20 chr2 245255391 245255639 -5432215 + AluSx SINE Alu 41 296 -16 947 177 33 74 chr2 245255939 245256154 -5431700 - MER63A DNA MER1_type 0 210 5 299 277 17 50 chr2 245256561 245256680 -5431174 - MIR SINE MIR -98 164 50 293 278 63 24 chr2 245256811 245256937 -5430917 + L1M4 LINE L1 4068 4198 -1948 320 269 93 47 chr2 245257148 245257405 -5430449 + L1M4 LINE L1 4534 4802 -1344 1926 95 7 72 chr2 245257405 245257539 -5430315 + AluSx SINE Alu 1 142 -165 2367 103 0 0 chr2 245257539 245257849 -5430005 + AluSg SINE Alu 1 310 0 1926 95 7 72 chr2 245257849 245258041 -5429813 + AluSx SINE Alu 142 307 0 218 328 0 0 chr2 245259814 245259878 -5427976 - L3b LINE CR1 -220 1363 1300 27 0 0 0 chr2 245261995 245262022 -5425832 + AT_rich Low_complexity Low_complexity 1 27 0 343 237 21 10 chr2 245262480 245262577 -5425277 + L1M4 LINE L1 4549 4646 -1500 230 234 203 0 chr2 245262684 245262748 -5425106 - MIR SINE MIR -33 229 153 227 222 16 16 chr2 245262750 245262813 -5425041 + MER116 DNA Mariner 6 68 -12 503 273 79 0 chr2 245262813 245262952 -5424902 - MIR SINE MIR -108 154 5 470 320 173 29 chr2 245262957 245263413 -5424441 + L1M4 LINE L1 4807 5328 -818 646 298 68 49 chr2 245263488 245263726 -5424128 - L2 LINE L2 -85 3228 2996 2288 128 0 3 chr2 245263726 245264038 -5423816 + AluSx SINE Alu 1 311 -1 646 298 68 49 chr2 245264038 245264319 -5423535 - L2 LINE L2 -317 2996 2700 636 193 0 86 chr2 245264515 245264655 -5423199 - FLAM_C SINE Alu -1 132 5 696 110 0 0 chr2 245264812 245264912 -5422942 + HY3 scRNA scRNA 1 100 -1 271 282 10 10 chr2 245264932 245265035 -5422819 + L1ME LINE L1 4095 4197 -1949 240 307 101 32 chr2 245265110 245265281 -5422573 + L1P LINE L1 4480 4638 -1508 2126 106 38 3 chr2 245265281 245265574 -5422280 + AluSq SINE Alu 1 303 -10 240 307 101 32 chr2 245265574 245265651 -5422203 + L1P LINE L1 4638 4708 -1438 2571 53 0 3 chr2 245265651 245265950 -5421904 + AluY SINE Alu 1 298 -13 240 307 101 32 chr2 245265950 245266093 -5421761 + L1P LINE L1 4708 4840 -1306 2319 109 3 0 chr2 245266093 245266395 -5421459 - AluSx SINE Alu -9 303 1 240 307 101 32 chr2 245266395 245266529 -5421325 + L1P LINE L1 4840 5051 -1095 1766 171 10 7 chr2 245266545 245266837 -5421017 - AluJb SINE Alu -14 298 6 314 224 59 12 chr2 245266854 245266939 -5420915 + L1ME LINE L1 5145 5233 -913 976 228 24 93 chr2 245266958 245267379 -5420475 + L1ME LINE L1 5270 5661 -501 234 234 285 15 chr2 245267394 245267531 -5420323 + Charlie2 DNA MER1_type 38 211 -2651 381 239 51 0 chr2 245267630 245267748 -5420106 + Charlie2 DNA MER1_type 1854 1981 -881 2183 107 7 7 chr2 245267748 245268046 -5419808 - AluSx SINE Alu -14 298 1 381 239 51 0 chr2 245268046 245268065 -5419789 + Charlie2 DNA MER1_type 1981 1998 -864 22 0 0 0 chr2 245268088 245268110 -5419744 + AT_rich Low_complexity Low_complexity 1 22 0 819 98 23 23 chr2 245268200 245268333 -5419521 + AluSq/x SINE Alu 1 133 -179 2321 91 0 0 chr2 245268465 245268752 -5419102 - AluSx SINE Alu -25 287 1 216 0 0 0 chr2 245269530 245269554 -5418300 + (T)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr2 245271880 245271901 -5415953 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 245271958 245271987 -5415867 + AT_rich Low_complexity Low_complexity 1 29 0 1702 183 35 3 chr2 245273046 245273331 -5414523 - AluSx SINE Alu -18 294 1 1915 171 20 0 chr2 245273414 245273712 -5414142 - AluJb SINE Alu -8 304 1 186 71 0 0 chr2 245273950 245273978 -5413876 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 233 255 0 0 chr2 245274070 245274121 -5413733 + CT-rich Low_complexity Low_complexity 4 54 0 246 193 0 0 chr2 245274138 245274195 -5413659 + CT-rich Low_complexity Low_complexity 6 62 0 1989 169 0 3 chr2 245274200 245274513 -5413341 - AluJb SINE Alu 0 312 1 2821 143 17 2 chr2 245274530 245274950 -5412904 + MSTB LTR MaLR 1 426 0 9538 158 36 19 chr2 245274950 245275331 -5412523 + MSTB-int LTR MaLR 1 374 -1277 2250 139 0 0 chr2 245275331 245275641 -5412213 - AluSx SINE Alu -2 310 1 9538 158 36 19 chr2 245275641 245276883 -5410971 + MSTB-int LTR MaLR 374 1651 0 2666 130 31 26 chr2 245276883 245277078 -5410776 + MSTB LTR MaLR 1 194 -232 2475 81 3 0 chr2 245277078 245277374 -5410480 + AluSx SINE Alu 2 298 -14 2666 130 31 26 chr2 245277374 245277602 -5410252 + MSTB LTR MaLR 194 426 0 323 288 15 45 chr2 245278337 245278469 -5409385 + L2 LINE L2 3143 3270 -2 3291 148 53 53 chr2 245278495 245278833 -5409021 + L1MB2 LINE L1 5476 5813 -358 2367 94 7 0 chr2 245278833 245279142 -5408712 - AluY SINE Alu 0 311 1 3291 148 53 53 chr2 245279142 245279164 -5408690 + L1MB2 LINE L1 5813 5834 -337 1677 177 0 33 chr2 245279164 245279464 -5408390 + AluJb SINE Alu 1 290 -22 3291 148 53 53 chr2 245279464 245279748 -5408106 + L1MB2 LINE L1 5834 6124 -47 2169 98 3 42 chr2 245279748 245280055 -5407799 - AluSg1 SINE Alu -14 295 1 3291 148 53 53 chr2 245280055 245280104 -5407750 + L1MB2 LINE L1 6123 6171 0 22 0 0 0 chr2 245280104 245280126 -5407728 + AT_rich Low_complexity Low_complexity 1 22 0 2044 148 0 7 chr2 245280399 245280703 -5407151 - AluSx SINE Alu -10 302 1 1757 105 0 4 chr2 245280712 245280941 -5406913 - AluSg/x SINE Alu -6 304 77 1863 163 37 0 chr2 245281184 245281478 -5406376 + AluJo SINE Alu 1 305 -7 1960 196 85 2 chr2 245282622 245283021 -5404833 + MSTB1 LTR MaLR 1 432 0 1427 204 145 57 chr2 245283126 245283622 -5404232 - MER74A LTR ERVL 0 558 19 1471 172 26 7 chr2 245283622 245283895 -5403959 + AluJo SINE Alu 1 278 -34 4301 180 57 12 chr2 245284529 245284600 -5403254 + MER6 DNA MER2_type 1 67 -798 1913 91 4 0 chr2 245284600 245284842 -5403012 + AluSp SINE Alu 1 243 -70 263 49 24 0 chr2 245284848 245284889 -5402965 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 4301 180 57 12 chr2 245284889 245285154 -5402700 + MER6 DNA MER2_type 71 323 -542 234 0 0 0 chr2 245285154 245285180 -5402674 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 4301 180 57 12 chr2 245285180 245285663 -5402191 + MER6 DNA MER2_type 323 865 0 183 311 57 57 chr2 245285728 245285850 -5402004 - MIR SINE MIR -71 191 70 2141 139 0 0 chr2 245286606 245286901 -5400953 - AluSx SINE Alu -17 295 1 190 302 0 0 chr2 245287618 245287661 -5400193 + MIR SINE MIR 165 207 -55 784 238 129 44 chr2 245288187 245288637 -5399217 - L1MC5 LINE L1 -160 7801 7314 2170 85 50 0 chr2 245288639 245288921 -5398933 + AluSp SINE Alu 2 297 -16 317 288 102 0 chr2 245289247 245289365 -5398489 - L1ME4a LINE L1 -58 6063 5934 2290 102 7 0 chr2 245289455 245289750 -5398104 - AluSg SINE Alu -13 297 1 443 267 59 41 chr2 245289752 245289945 -5397909 - L1ME4a LINE L1 -745 5401 5208 448 332 5 10 chr2 245289951 245290156 -5397698 - L1ME4a LINE L1 -1990 4156 3953 2399 112 0 0 chr2 245290214 245290519 -5397335 + AluSx SINE Alu 1 305 -7 32 43 0 0 chr2 245290579 245290625 -5397229 + AT_rich Low_complexity Low_complexity 1 46 0 315 354 103 31 chr2 245290788 245291107 -5396747 - L1ME4a LINE L1 -2440 3706 3365 2264 106 0 7 chr2 245291149 245291442 -5396412 + AluSx SINE Alu 1 291 -21 241 270 88 34 chr2 245291443 245291591 -5396263 - LTR33 LTR ERVL -28 493 338 283 319 37 7 chr2 245291653 245291788 -5396066 - LTR33 LTR ERVL -305 216 78 287 267 48 58 chr2 245291838 245292149 -5395705 - L1ME4a LINE L1 -2846 3300 2993 351 65 0 0 chr2 245292190 245292236 -5395618 + (TTCC)n Simple_repeat Simple_repeat 1 46 0 1899 162 10 17 chr2 245292236 245292538 -5395316 - AluJo SINE Alu -12 300 1 2116 126 3 7 chr2 245293034 245293335 -5394519 - AluSx SINE Alu -12 300 1 1629 105 165 4 chr2 245293631 245293879 -5393975 + AluSg1 SINE Alu 9 296 -13 189 0 0 0 chr2 245293879 245293900 -5393954 + (TA)n Simple_repeat Simple_repeat 1 21 0 180 346 144 10 chr2 245294179 245294283 -5393571 - L2 LINE L2 -3 3269 3152 334 289 135 64 chr2 245294324 245294668 -5393186 - L2 LINE L2 -213 3059 2741 1957 167 0 3 chr2 245294668 245294956 -5392898 + AluJb SINE Alu 1 287 -25 334 289 135 64 chr2 245294956 245294969 -5392885 - L2 LINE L2 -531 2741 2730 273 29 0 0 chr2 245294969 245295003 -5392851 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 334 289 135 64 chr2 245295003 245295184 -5392670 - L2 LINE L2 -542 2730 2497 1799 250 79 122 chr2 245295232 245296763 -5391091 + L2 LINE L2 1834 3311 -2 236 305 94 31 chr2 245296777 245297000 -5390854 - HAL1 LINE L1 -814 1693 1457 329 221 0 0 chr2 245297362 245297430 -5390424 + MLT1L LTR MaLR 142 209 -406 814 229 26 26 chr2 245297508 245297735 -5390119 + MLT1L LTR MaLR 363 589 -26 1217 234 55 110 chr2 245297753 245298297 -5389557 - LTR33A LTR ERVL -8 515 2 203 256 0 0 chr2 245299028 245299067 -5388787 + polypyrimidine Low_complexity Low_complexity 1 39 0 1734 183 31 0 chr2 245300357 245300647 -5387207 - AluJb SINE Alu -13 299 1 356 317 156 45 chr2 245300648 245301314 -5386540 + L2 LINE L2 2541 3272 0 870 186 0 64 chr2 245301457 245301629 -5386225 - U1 snRNA snRNA -1 164 4 228 284 108 0 chr2 245303056 245303130 -5384724 - L2 LINE L2 -1 3271 3190 2068 149 0 16 chr2 245303697 245304013 -5383841 - AluJo SINE Alu -1 311 1 424 263 140 21 chr2 245304962 245305148 -5382706 - MARNA DNA Mariner -290 296 89 361 243 223 0 chr2 245305213 245305361 -5382493 + MER5A DNA MER1_type 4 184 -5 203 210 0 48 chr2 245306246 245306308 -5381546 + (CCGCG)n Simple_repeat Simple_repeat 5 63 0 2165 105 3 20 chr2 245308599 245308905 -5378949 + AluSx SINE Alu 1 301 -11 272 356 39 0 chr2 245308918 245309022 -5378832 + L2 LINE L2 3201 3308 -5 338 312 92 0 chr2 245309834 245309975 -5377879 + L1ME4a LINE L1 5806 5959 -162 2472 100 0 0 chr2 245309992 245310302 -5377552 + AluY SINE Alu 1 310 -1 35 41 0 0 chr2 245310306 245310355 -5377499 + AT_rich Low_complexity Low_complexity 1 49 0 1906 149 0 20 chr2 245310355 245310651 -5377203 - AluJo SINE Alu -22 290 1 188 254 155 0 chr2 245312094 245312165 -5375689 - MIR SINE MIR -123 139 58 202 244 0 0 chr2 245312231 245312276 -5375578 - L2 LINE L2 -18 3295 3251 216 0 0 0 chr2 245312699 245312723 -5375131 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1839 129 108 18 chr2 245312832 245313164 -5374690 + THE1B LTR MaLR 3 364 0 2221 164 40 35 chr2 245314015 245314213 -5373641 + MSTA LTR MaLR 1 197 -231 2242 110 0 0 chr2 245314213 245314503 -5373351 + AluSx SINE Alu 1 290 -22 2221 164 40 35 chr2 245314503 245314730 -5373124 + MSTA LTR MaLR 197 428 0 3118 202 59 39 chr2 245315034 245315836 -5372018 - L1ME2 LINE L1 -23 6141 5324 218 319 0 33 chr2 245316090 245316181 -5371673 + MIR SINE MIR 49 136 -126 1956 153 31 0 chr2 245316590 245316884 -5370970 - AluJo SINE Alu -5 307 5 190 77 0 51 chr2 245317906 245317945 -5369909 + (GAA)n Simple_repeat Simple_repeat 2 38 0 1417 159 4 0 chr2 245318297 245318561 -5369293 - L1MD3 LINE L1 0 7995 7731 829 258 32 0 chr2 245318883 245319069 -5368785 - MIR SINE MIR -25 237 46 202 267 0 0 chr2 245319363 245319408 -5368446 + L2 LINE L2 3183 3227 -86 715 266 72 9 chr2 245319797 245320019 -5367835 + L1MEc LINE L1 255 490 -5906 967 242 23 8 chr2 245320138 245320394 -5367460 + L1MEc LINE L1 517 776 -5620 835 179 0 0 chr2 245320436 245320570 -5367284 + AluJo SINE Alu 1 134 -178 1007 291 103 14 chr2 245320570 245321036 -5366818 + L1MEc LINE L1 883 1411 -4985 2079 153 3 0 chr2 245321036 245321343 -5366511 + AluSx SINE Alu 2 309 -3 1007 291 103 14 chr2 245321343 245321449 -5366405 + L1MEc LINE L1 1411 1506 -4890 298 193 0 0 chr2 245321449 245321506 -5366348 + FLAM SINE Alu 71 127 -6 443 220 0 0 chr2 245321513 245321604 -5366250 + L1MEc LINE L1 883 973 -5423 3019 212 32 33 chr2 245321608 245322493 -5365361 + L1M2 LINE L1 1538 2394 -4002 623 276 87 38 chr2 245322494 245322756 -5365098 + MLT1E LTR MaLR 1 275 -318 1264 148 55 118 chr2 245322756 245323086 -5364768 + MLT1A1 LTR MaLR 1 309 -56 766 123 0 0 chr2 245323106 245323212 -5364642 - FLAM_C SINE Alu -36 107 2 7222 231 53 39 chr2 245323248 245325551 -5362303 + L1M2 LINE L1 2470 4741 -1494 2156 247 93 2 chr2 245325551 245326066 -5361788 + REP3 LTR ERV 1 562 0 7222 231 53 39 chr2 245326066 245326635 -5361219 + L1M2 LINE L1 4741 5427 -808 1827 139 108 6 chr2 245326635 245326951 -5360903 + MER7A DNA MER2_type 1 346 0 7222 231 53 39 chr2 245326951 245327018 -5360836 + L1M2 LINE L1 5427 5492 -743 189 293 121 26 chr2 245327410 245327526 -5360328 + L2 LINE L2 1337 1463 -1851 252 341 85 23 chr2 245327545 245327721 -5360133 + L2 LINE L2 1805 1991 -1323 439 363 29 18 chr2 245328037 245328315 -5359539 + L2 LINE L2 2479 2759 -555 905 255 152 35 chr2 245328448 245328784 -5359070 + L1ME4a LINE L1 5549 5967 -154 2141 134 0 3 chr2 245328784 245329091 -5358763 + AluSx SINE Alu 1 306 -6 905 255 152 35 chr2 245329091 245329267 -5358587 + L1ME4a LINE L1 5967 6121 0 288 302 19 14 chr2 245330720 245330838 -5357016 - MIR SINE MIR -101 107 1 404 221 21 0 chr2 245331025 245331120 -5356734 + MER58 DNA MER1_type 40 136 -205 1530 129 0 46 chr2 245331120 245331360 -5356494 - AluSx SINE Alu -83 229 1 1633 166 21 21 chr2 245331360 245331643 -5356211 + AluJo SINE Alu 27 309 -3 2448 70 0 0 chr2 245331644 245331931 -5355923 + AluY SINE Alu 1 287 -24 285 266 38 0 chr2 245333412 245333491 -5354363 + L3 LINE CR1 1282 1363 -214 247 279 15 0 chr2 245333496 245333564 -5354290 + L3 LINE CR1 1289 1357 -220 180 0 0 0 chr2 245334370 245334390 -5353464 + (CA)n Simple_repeat Simple_repeat 2 21 0 237 216 11 57 chr2 245334830 245334918 -5352936 + (TCTCTG)n Simple_repeat Simple_repeat 3 86 0 183 162 0 0 chr2 245335376 245335413 -5352441 + C-rich Low_complexity Low_complexity 3 39 0 494 89 0 36 chr2 245335542 245335654 -5352200 + (CCCCCG)n Simple_repeat Simple_repeat 6 113 0 376 252 10 19 chr2 245336428 245336442 -5351412 - L1MA10 LINE L1 -2 6332 6319 1352 249 81 60 chr2 245336442 245336994 -5350860 - L1ME1 LINE L1 -5 6161 5593 1601 162 49 14 chr2 245336994 245337278 -5350576 + AluJo SINE Alu 1 294 -18 1352 249 81 60 chr2 245337278 245337344 -5350510 - L1ME1 LINE L1 -573 5593 5530 2103 125 3 0 chr2 245337937 245338226 -5349628 - AluSx SINE Alu -22 290 1 204 250 83 14 chr2 245339408 245339480 -5348374 - MIR SINE MIR -98 164 88 221 378 122 20 chr2 245339617 245339911 -5347943 + L2 LINE L2 2926 3249 -23 2239 111 29 10 chr2 245340170 245340476 -5347378 + AluSx SINE Alu 1 312 0 207 0 0 0 chr2 245341404 245341427 -5346427 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 403 339 172 47 chr2 245341842 245342269 -5345585 + L3 LINE CR1 81 614 -963 724 181 21 75 chr2 245342269 245342410 -5345444 - MER5B DNA MER1_type 0 178 48 2376 117 0 0 chr2 245342410 245342717 -5345137 + AluSx SINE Alu 1 307 -5 724 181 21 75 chr2 245342717 245342763 -5345091 - MER5B DNA MER1_type -130 48 1 403 339 172 47 chr2 245342763 245342969 -5344885 + L3 LINE CR1 614 793 -784 23 0 0 0 chr2 245344840 245344863 -5342991 + AT_rich Low_complexity Low_complexity 1 23 0 2103 122 0 0 chr2 245346086 245346365 -5341489 + AluSx SINE Alu 1 279 -33 378 0 0 0 chr2 245346365 245346407 -5341447 + (CA)n Simple_repeat Simple_repeat 1 42 0 353 216 141 116 chr2 245347381 245347474 -5340380 - MER5C DNA MER1_type 0 324 235 1582 177 62 3 chr2 245347474 245347638 -5340216 - AluJo SINE Alu -7 305 115 261 0 0 0 chr2 245347638 245347667 -5340187 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1582 177 62 3 chr2 245347667 245347790 -5340064 - AluJo SINE Alu -197 115 1 353 216 141 116 chr2 245347790 245347937 -5339917 - MER5C DNA MER1_type -89 235 78 1002 205 54 0 chr2 245348117 245348322 -5339532 - MER58A DNA MER1_type 0 224 9 437 242 75 72 chr2 245348553 245348846 -5339008 - L1MDa LINE L1 -4893 1647 1354 2072 158 97 5 chr2 245348883 245349235 -5338619 + MSTA LTR MaLR 1 394 -34 2371 109 0 0 chr2 245349235 245349547 -5338307 - AluSx SINE Alu 0 312 1 2072 158 97 5 chr2 245349547 245349586 -5338268 + MSTA LTR MaLR 394 428 0 35 0 0 0 chr2 245350097 245350132 -5337722 + AT_rich Low_complexity Low_complexity 1 35 0 208 275 300 25 chr2 245350132 245350144 -5337710 - L2 LINE L2 -1 3271 3264 1770 161 28 3 chr2 245350144 245350430 -5337424 - AluJb SINE Alu -19 293 1 208 275 300 25 chr2 245350430 245350497 -5337357 - L2 LINE L2 -8 3264 3170 228 296 0 0 chr2 245351622 245351676 -5336178 + (TG)n Simple_repeat Simple_repeat 1 54 0 247 299 83 35 chr2 245351751 245351895 -5335959 + MIR3 SINE MIR 7 157 -51 208 280 30 100 chr2 245351937 245352037 -5335817 + MIR3 SINE MIR 74 166 -42 565 294 41 12 chr2 245352406 245352576 -5335278 - MIR3 SINE MIR -25 183 9 225 319 66 22 chr2 245355040 245355131 -5332723 - MIR3 SINE MIR -48 160 66 578 247 55 0 chr2 245355246 245355392 -5332462 - MIR3 SINE MIR -38 170 17 220 265 27 95 chr2 245355428 245355575 -5332279 + L2 LINE L2 2597 2733 -581 2403 113 11 32 chr2 245355777 245356149 -5331705 - THE1B LTR MaLR 0 364 1 419 233 146 46 chr2 245356519 245356738 -5331116 - LTR33 LTR ERVL -241 280 40 380 242 87 78 chr2 245357560 245357791 -5330063 + L1ME LINE L1 5496 5728 -393 1869 203 17 27 chr2 245359352 245359765 -5328089 + MLT2D LTR ERVL 6 414 0 354 355 107 15 chr2 245360082 245360279 -5327575 + MLT1L LTR MaLR 312 526 -89 1814 145 7 13 chr2 245362297 245362601 -5325253 - AluJb SINE Alu -6 306 5 2385 67 0 25 chr2 245362887 245363203 -5324651 - AluY SINE Alu -3 308 1 237 313 15 0 chr2 245363348 245363415 -5324439 - L2 LINE L2 -6 3266 3199 385 281 174 0 chr2 245363437 245363604 -5324250 - MIR SINE MIR -30 232 37 5991 143 10 14 chr2 245363704 245364639 -5323215 + THE1-int LTR MaLR 650 1580 0 1984 136 172 5 chr2 245364639 245365006 -5322848 + MSTA LTR MaLR 1 428 0 560 72 60 12 chr2 245365305 245365388 -5322466 + MER4A LTR ERV1 1 87 -577 1742 124 7 32 chr2 245365428 245365710 -5322144 + MER4A LTR ERV1 372 646 -18 819 78 24 2 chr2 245366638 245366773 -5321081 + MSTA-int LTR MaLR 1446 1635 0 2168 137 132 5 chr2 245366773 245367153 -5320701 + MSTA LTR MaLR 1 428 0 885 227 138 79 chr2 245367166 245367651 -5320203 + MLT1F1 LTR MaLR 42 567 0 946 209 45 100 chr2 245368168 245368261 -5319593 + MLT1B LTR MaLR 1 98 -292 2871 92 51 17 chr2 245368261 245368675 -5319179 - MSTA LTR MaLR 0 428 1 946 209 45 100 chr2 245368675 245368911 -5318943 + MLT1B LTR MaLR 98 312 -78 370 330 107 24 chr2 245369066 245369402 -5318452 + HAL1b LINE L1 303 666 -682 1938 147 0 3 chr2 245369405 245369717 -5318137 + AluSx SINE Alu 1 311 -1 1225 222 32 74 chr2 245369755 245370133 -5317721 + MLT1A1 LTR MaLR 4 365 0 2691 103 54 7 chr2 245370331 245370740 -5317114 + MSTA LTR MaLR 1 428 0 333 292 26 0 chr2 245371275 245371388 -5316466 + L1ME3A LINE L1 4733 4848 -1298 2358 235 85 57 chr2 245371537 245372421 -5315433 + L1ME3A LINE L1 5060 5985 -185 1587 170 13 50 chr2 245372421 245372739 -5315115 + AluJb SINE Alu 1 306 -6 2358 235 85 57 chr2 245372739 245372929 -5314925 + L1ME3A LINE L1 5985 6168 -2 21 36 0 0 chr2 245373480 245373508 -5314346 + AT_rich Low_complexity Low_complexity 1 28 0 327 248 91 77 chr2 245373541 245373745 -5314109 + L1ME4a LINE L1 2678 2878 -3268 1927 130 0 3 chr2 245373745 245374052 -5313802 + AluSx SINE Alu 1 306 0 327 248 91 77 chr2 245374052 245374430 -5313424 + L1ME4a LINE L1 2878 3269 -2877 36 0 0 0 chr2 245374477 245374513 -5313341 + AT_rich Low_complexity Low_complexity 1 36 0 1069 58 0 0 chr2 245374581 245374718 -5313136 + AluY SINE Alu 175 311 0 8644 162 22 59 chr2 245374726 245377519 -5310335 + L1PB2 LINE L1 3174 5844 -307 1993 109 14 3 chr2 245377519 245377803 -5310051 - AluSx SINE Alu -25 287 1 8644 162 22 59 chr2 245377803 245378100 -5309754 + L1PB2 LINE L1 5844 6151 0 423 296 66 56 chr2 245378090 245378482 -5309372 + L1ME4a LINE L1 3714 4109 -2037 * 294 332 0 32 chr2 245378896 245379086 -5308768 + L1ME4a LINE L1 4109 4292 -1854 312 303 66 96 chr2 245379116 245379387 -5308467 + L1ME4a LINE L1 4608 4869 -1277 1246 154 64 111 chr2 245379387 245379764 -5308090 + MLT1A1 LTR MaLR 5 363 -2 312 303 66 96 chr2 245379764 245379825 -5308029 + L1ME4a LINE L1 4869 4930 -1216 363 305 150 9 chr2 245380152 245380365 -5307489 + L1ME4a LINE L1 5310 5552 -2256 644 239 107 13 chr2 245380846 245381080 -5306774 + L1ME4a LINE L1 5727 5982 -139 372 295 132 49 chr2 245381702 245382051 -5305803 - L2 LINE L2 -924 2390 2013 2855 93 0 5 chr2 245382621 245382998 -5304856 - THE1C LTR MaLR 0 375 1 2288 249 108 21 chr2 245385140 245386180 -5301674 - L2 LINE L2 -49 3264 2125 356 85 0 0 chr2 245386541 245386588 -5301266 + Alu SINE Alu 1 47 -255 1163 111 6 0 chr2 245386590 245386762 -5301092 + AluSg/x SINE Alu 129 301 -9 584 223 31 0 chr2 245386770 245386900 -5300954 - L1ME1 LINE L1 -5 6161 6028 272 276 174 0 chr2 245387918 245388016 -5299838 + MIR SINE MIR 31 145 -117 1905 144 0 16 chr2 245388281 245388587 -5299267 + AluJb SINE Alu 1 301 -11 1616 112 119 11 chr2 245388974 245389251 -5298603 - AluSg1 SINE Alu -1 308 2 1896 158 6 3 chr2 245389262 245389573 -5298281 - AluJb SINE Alu 0 312 1 2271 152 60 9 chr2 245389574 245390009 -5297845 - L1MB3 LINE L1 -41 6142 5686 5316 180 25 16 chr2 245390646 245391677 -5296177 + L1MD2 LINE L1 5318 6357 -2 736 122 0 28 chr2 245391796 245391903 -5295951 + FRAM SINE Alu 52 155 -21 622 244 105 0 chr2 245391974 245392146 -5295708 + MIR SINE MIR 36 225 -37 1034 260 76 42 chr2 245392528 245392965 -5294889 + MLT1C LTR MaLR 1 460 -7 2212 97 0 10 chr2 245393443 245393751 -5294103 + AluSc SINE Alu 1 305 -4 339 302 24 16 chr2 245393751 245393877 -5293977 - Charlie7 DNA MER1_type -2485 127 1 2547 134 24 7 chr2 245393930 245394340 -5293514 + MSTA LTR MaLR 1 417 -11 390 204 24 96 chr2 245394437 245394561 -5293293 - MER113 DNA MER1_type? -197 324 193 558 41 0 0 chr2 245394561 245394634 -5293220 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 1850 129 4 0 chr2 245394637 245394909 -5292945 - AluSx SINE Alu -39 273 1 390 204 24 96 chr2 245394909 245394947 -5292907 - MER113 DNA MER1_type? -330 191 170 1921 134 10 0 chr2 245394948 245395246 -5292608 - AluSx SINE Alu -11 301 1 962 186 6 0 chr2 245395381 245395564 -5292290 + AluJo SINE Alu 1 184 -128 588 195 50 31 chr2 245395565 245395724 -5292130 - L1MB3 LINE L1 -797 5349 5188 207 333 71 16 chr2 245395824 245395950 -5291904 - MIR3 SINE MIR -15 193 61 668 171 18 0 chr2 245396117 245396228 -5291626 - FRAM SINE Alu -10 166 54 261 83 0 0 chr2 245396383 245396419 -5291435 + (TG)n Simple_repeat Simple_repeat 2 37 0 350 366 150 25 chr2 245397567 245397966 -5289888 + L1M4 LINE L1 4856 5304 -842 2258 89 3 0 chr2 245398372 245398663 -5289191 - AluSp SINE Alu -21 292 1 1456 142 130 53 chr2 245398910 245399248 -5288606 - MLT1A1 LTR MaLR -1 364 1 320 228 238 0 chr2 245399431 245399532 -5288322 - MER5A DNA MER1_type -6 183 59 406 235 24 0 chr2 245399544 245399629 -5288225 + MER5A DNA MER1_type 26 112 -77 1281 193 37 0 chr2 245402539 245402783 -5285071 - L1MA5 LINE L1 -367 5933 5681 327 179 15 0 chr2 245402783 245402843 -5285011 + L1MA6 LINE L1 6233 6300 0 375 23 0 0 chr2 245405648 245405692 -5282162 + (TG)n Simple_repeat Simple_repeat 2 45 0 1643 264 85 18 chr2 245406524 245407338 -5280516 + L1MD2 LINE L1 3001 3868 -2278 * 3569 199 62 26 chr2 245407320 245408140 -5279714 + L1MD2 LINE L1 5444 6293 -66 2389 272 83 48 chr2 245408155 245409303 -5278551 + L1ME3A LINE L1 3829 4935 -1235 4942 68 26 5 chr2 245409303 245409961 -5277893 + L1PA10 LINE L1 5486 6157 -11 2389 272 83 48 chr2 245409961 245410094 -5277760 + L1ME3A LINE L1 4935 5062 -1108 279 0 0 0 chr2 245410100 245410131 -5277723 + (TC)n Simple_repeat Simple_repeat 2 32 0 2092 105 0 0 chr2 245410131 245410409 -5277445 - AluSx SINE Alu -23 289 9 2389 272 83 48 chr2 245410409 245410968 -5276886 + L1ME3A LINE L1 5062 5764 -406 2073 100 3 10 chr2 245410968 245411267 -5276587 + AluSc SINE Alu 1 297 -12 2389 272 83 48 chr2 245411267 245411555 -5276299 + L1ME3A LINE L1 5764 6040 -130 265 132 0 0 chr2 245411728 245411766 -5276088 + MSTC LTR MaLR 1 38 -390 199 264 11 28 chr2 245412436 245412618 -5275236 + (TG)n Simple_repeat Simple_repeat 2 180 0 260 270 34 11 chr2 245412634 245412723 -5275131 + (TATG)n Simple_repeat Simple_repeat 1 91 0 329 250 0 13 chr2 245413942 245414018 -5273836 + L2 LINE L2 3192 3266 -6 692 305 18 65 chr2 245415011 245415398 -5272456 + L1MC4a LINE L1 5560 5928 -1880 3438 137 68 6 chr2 245415659 245416178 -5271676 + LTR19B LTR ERV1 1 557 -23 2398 59 0 37 chr2 245416178 245416501 -5271353 - AluY SINE Alu 0 311 1 3438 137 68 6 chr2 245416501 245416527 -5271327 + LTR19B LTR ERV1 557 580 0 847 194 24 62 chr2 245416711 245416922 -5270932 - MER3 DNA MER1_type -5 204 2 252 320 63 57 chr2 245417658 245417833 -5270021 - L3b LINE CR1 -193 1390 1215 230 338 0 13 chr2 245418011 245418088 -5269766 + MIR3 SINE MIR 114 189 -19 230 258 0 16 chr2 245418615 245418677 -5269177 + T-rich Low_complexity Low_complexity 5 65 0 489 343 17 4 chr2 245419279 245419518 -5268336 - L1ME LINE L1 -358 5806 5565 353 290 74 37 chr2 245419530 245419554 -5268300 - L1MEc LINE L1 -860 1630 1608 2168 109 0 0 chr2 245419554 245419858 -5267996 - AluSx SINE Alu -8 304 1 353 290 74 37 chr2 245419858 245420254 -5267600 - L1MEc LINE L1 -882 1608 1168 441 0 0 0 chr2 245420748 245420797 -5267057 + (TG)n Simple_repeat Simple_repeat 2 50 0 1161 125 0 0 chr2 245420815 245420975 -5266879 - AluSx SINE Alu -152 160 1 1047 272 59 68 chr2 245421185 245421210 -5266644 - L1MEc LINE L1 -5011 1108 1084 1852 141 41 0 chr2 245421210 245421500 -5266354 - AluSx SINE Alu -10 302 1 1047 272 59 68 chr2 245421500 245421639 -5266215 - L1MEc LINE L1 -5035 1084 945 1888 80 12 0 chr2 245421639 245421890 -5265964 - AluSp SINE Alu -12 301 48 1047 272 59 68 chr2 245421890 245422405 -5265449 - L1MEc LINE L1 -5174 945 434 236 214 0 0 chr2 245422653 245422695 -5265159 + tRNA-Ser-AGC tRNA tRNA 4 45 -40 338 258 345 10 chr2 245422702 245422784 -5265070 + MIR SINE MIR 4 57 -205 1491 237 43 49 chr2 245422784 245423290 -5264564 - MLT1D LTR MaLR 0 505 3 338 258 345 10 chr2 245423290 245423401 -5264453 + MIR SINE MIR 57 262 0 209 260 40 0 chr2 245423640 245423690 -5264164 - L2 LINE L2 -12 3301 3250 1138 233 5 0 chr2 245424170 245424393 -5263461 + MER58A DNA MER1_type 1 224 0 183 323 15 31 chr2 245424758 245424823 -5263031 + MIR3 SINE MIR 134 197 -11 226 297 59 68 chr2 245426991 245427109 -5260745 + MIR SINE MIR 128 244 -18 396 316 27 32 chr2 245429879 245430066 -5257788 + MLT1J2 LTR MaLR 102 287 -163 405 156 0 0 chr2 245430369 245430446 -5257408 + (CCA)n Simple_repeat Simple_repeat 3 79 0 419 246 83 100 chr2 245430750 245431169 -5256685 + MLT1H1 LTR MaLR 20 431 -111 414 271 66 20 chr2 245431430 245431603 -5256251 - MIR3 SINE MIR -61 147 3 3924 197 34 16 chr2 245433099 245434073 -5253781 - L1M LINE L1 -743 5403 4425 1839 142 24 0 chr2 245434090 245434379 -5253475 - AluSx SINE Alu -16 296 1 332 282 30 30 chr2 245437320 245437451 -5250403 - MIR3 SINE MIR -15 193 63 417 237 45 77 chr2 245440306 245440462 -5247392 - MIR SINE MIR -89 173 23 2864 141 10 23 chr2 245440573 245441057 -5246797 + MER50 LTR ERV1 1 478 -256 353 76 0 0 chr2 245441054 245441103 -5246751 - AluSp/q SINE Alu -43 260 217 * 3732 112 58 31 chr2 245441205 245441821 -5246033 + L1PB1 LINE L1 5519 6151 0 537 265 48 0 chr2 245442568 245442715 -5245139 - MER5B DNA MER1_type -18 160 7 207 285 49 69 chr2 245442763 245442907 -5244947 + L2 LINE L2 2124 2264 -1050 2571 142 0 12 chr2 245443441 245443850 -5244004 + L1PA13 LINE L1 5760 6163 0 205 283 25 58 chr2 245444501 245444621 -5243233 - MIR SINE MIR -59 149 34 381 307 15 45 chr2 245444854 245445056 -5242798 + L3 LINE CR1 1130 1325 -252 419 267 52 15 chr2 245445067 245445202 -5242652 - L2 LINE L2 0 3272 3133 400 297 136 52 chr2 245446743 245447073 -5240781 - L1ME LINE L1 -350 5771 5414 180 0 0 0 chr2 245447595 245447615 -5240239 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 422 242 6 0 chr2 245448148 245448309 -5239545 + (TG)n Simple_repeat Simple_repeat 1 162 0 579 238 36 26 chr2 245449167 245449360 -5238494 + L1MC1 LINE L1 6139 6333 0 261 0 0 0 chr2 245449677 245449706 -5238148 + (TC)n Simple_repeat Simple_repeat 2 30 0 391 217 29 12 chr2 245450530 245450651 -5237203 + MIR SINE MIR 105 227 -35 308 200 42 95 chr2 245450846 245450941 -5236913 - L1MC4 LINE L1 -1340 6702 6613 338 260 82 55 chr2 245450942 245451088 -5236766 - L1MC4 LINE L1 -1339 6703 6554 351 114 30 38 chr2 245451088 245451219 -5236635 + (TA)n Simple_repeat Simple_repeat 2 131 0 360 280 57 6 chr2 245451222 245451365 -5236489 - L1MC4 LINE L1 -1337 6705 6589 186 111 19 37 chr2 245451373 245451427 -5236427 + (TA)n Simple_repeat Simple_repeat 2 54 0 306 227 57 45 chr2 245451427 245451515 -5236339 - L1MC4 LINE L1 -1339 6703 6615 596 142 42 11 chr2 245451531 245452057 -5235797 + (TA)n Simple_repeat Simple_repeat 1 542 0 332 230 10 80 chr2 245451969 245452069 -5235785 + L1MC4 LINE L1 6613 6705 -1337 * 305 224 22 127 chr2 245452073 245452207 -5235647 + L1MC4 LINE L1 6583 6702 -1340 * 454 134 39 39 chr2 245452103 245452282 -5235572 + (TA)n Simple_repeat Simple_repeat 1 179 0 374 222 22 44 chr2 245452282 245452372 -5235482 + L1MC4 LINE L1 6616 6703 -1339 38 51 0 0 chr2 245452375 245452434 -5235420 + AT_rich Low_complexity Low_complexity 1 59 0 320 208 50 20 chr2 245452602 245452703 -5235151 - MIR SINE MIR -35 227 124 590 244 119 5 chr2 245453496 245453689 -5234165 + MIR SINE MIR 29 243 -19 233 297 0 16 chr2 245453837 245453901 -5233953 + MIR SINE MIR 5 67 -195 594 258 70 44 chr2 245454121 245454523 -5233331 + L1MEc LINE L1 656 1031 -5174 * 851 277 88 7 chr2 245454518 245454937 -5232917 + L1MEc LINE L1 1639 2091 -4305 1452 254 44 9 chr2 245454940 245455473 -5232381 + L1MEc LINE L1 2151 2660 -3555 2716 141 14 30 chr2 245455529 245455970 -5231884 + Tigger2a DNA MER2_type 1 434 0 198 306 28 0 chr2 245456485 245456557 -5231297 - MIR3 SINE MIR -54 154 81 269 151 19 0 chr2 245460037 245460090 -5227764 + CT-rich Low_complexity Low_complexity 3 56 0 1646 137 87 40 chr2 245460090 245460389 -5227465 - AluSq SINE Alu 0 313 1 22 35 0 0 chr2 245460517 245460546 -5227308 + AT_rich Low_complexity Low_complexity 1 29 0 186 87 65 0 chr2 245460553 245460599 -5227255 + (TA)n Simple_repeat Simple_repeat 1 49 0 1388 185 35 25 chr2 245463232 245463518 -5224336 + MLT1C LTR MaLR 8 296 -171 280 323 11 0 chr2 245463562 245463655 -5224199 - MIR SINE MIR -69 193 100 704 267 111 65 chr2 245464882 245465328 -5222526 - HAL1b LINE L1 -617 731 307 3593 120 0 4 chr2 245465328 245465843 -5222011 + MER75 DNA T2_type 1 513 -1 704 267 111 65 chr2 245465843 245465894 -5221960 - HAL1b LINE L1 -1041 307 260 1731 174 3 11 chr2 245465894 245466181 -5221673 - AluJo SINE Alu -27 285 1 704 267 111 65 chr2 245466181 245466329 -5221525 - HAL1b LINE L1 -1088 260 55 1918 140 20 0 chr2 245466528 245466820 -5221034 - AluSx SINE Alu -14 298 1 2522 134 16 60 chr2 245467696 245467950 -5219904 - MSTA LTR MaLR 0 428 201 2276 100 0 31 chr2 245467950 245468270 -5219584 - AluSp SINE Alu -3 310 1 2522 134 16 60 chr2 245468270 245468463 -5219391 - MSTA LTR MaLR -227 201 1 222 267 0 0 chr2 245468587 245468647 -5219207 - L2 LINE L2 -6 3307 3248 2260 242 80 31 chr2 245468953 245469764 -5218090 + L1MC4 LINE L1 6963 7813 -229 2081 123 3 7 chr2 245471661 245471962 -5215892 + AluSx SINE Alu 1 300 -12 181 157 0 39 chr2 245473727 245473778 -5214076 + CT-rich Low_complexity Low_complexity 2 50 0 1471 216 67 42 chr2 245474134 245474490 -5213364 + MLT1A1 LTR MaLR 1 365 0 523 189 11 0 chr2 245474503 245474598 -5213256 + MLT1C LTR MaLR 270 365 0 526 189 11 0 chr2 245474612 245474707 -5213147 + MLT1A1 LTR MaLR 270 365 0 3559 232 60 41 chr2 245474848 245476022 -5211832 - L1M4 LINE L1 -758 6348 5153 920 181 62 18 chr2 245476007 245476233 -5211621 - L1MC3 LINE L1 -7 7778 7543 * 2000 212 43 11 chr2 245476236 245476789 -5211065 - L1M4 LINE L1 -2643 4463 3893 43909 32 23 1 chr2 245476804 245482828 -5205026 - L1PA2 LINE L1 -3 6152 1 2717 255 48 12 chr2 245482835 245483742 -5204112 - L1M4 LINE L1 -3207 3899 2956 1040 203 47 66 chr2 245483950 245484270 -5203584 - L1M4 LINE L1 -6667 363 50 224 279 107 21 chr2 245486993 245487133 -5200721 + MIR SINE MIR 56 207 -55 45 0 0 0 chr2 245487140 245487185 -5200669 + AT_rich Low_complexity Low_complexity 1 45 0 2123 99 53 0 chr2 245487489 245487773 -5200081 + AluSg SINE Alu 1 299 -11 325 279 31 0 chr2 245490287 245490416 -5197438 - HAL1 LINE L1 -131 2376 2244 188 268 99 0 chr2 245491030 245491101 -5196753 + L2 LINE L2 3191 3268 -4 251 256 122 0 chr2 245491223 245491313 -5196541 + MIR SINE MIR 156 256 -6 2235 98 3 3 chr2 245492131 245492428 -5195426 - AluSx SINE Alu -15 297 1 195 42 0 0 chr2 245492917 245492941 -5194913 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 1364 159 0 5 chr2 245492947 245493155 -5194699 - AluJo SINE Alu -105 207 1 1055 203 49 36 chr2 245494661 245494966 -5192888 + L1MB5 LINE L1 5748 6056 -118 324 217 42 50 chr2 245496106 245496226 -5191628 - L1MC4 LINE L1 -974 7068 6950 189 107 0 0 chr2 245496258 245496286 -5191568 + (AGGGGG)n Simple_repeat Simple_repeat 1 28 0 239 203 14 0 chr2 245496451 245496525 -5191329 + GA-rich Low_complexity Low_complexity 1 75 0 21 0 0 0 chr2 245496760 245496781 -5191073 + AT_rich Low_complexity Low_complexity 1 21 0 393 117 0 0 chr2 245497300 245497360 -5190494 + (A)n Simple_repeat Simple_repeat 1 60 0 220 320 50 0 chr2 245497566 245497666 -5190188 - L3 LINE CR1 -356 1221 1117 1872 188 16 22 chr2 245497908 245498275 -5189579 - MLT1A1 LTR MaLR 0 365 1 551 192 10 0 chr2 245498823 245498927 -5188927 - Tigger7 DNA MER2_type -1 2490 2386 1149 193 73 9 chr2 245498929 245499147 -5188707 - Tigger7 DNA MER2_type -318 232 1 2524 71 0 0 chr2 245499888 245500183 -5187671 - AluY SINE Alu -16 295 1 746 239 75 11 chr2 245500510 245500698 -5187156 + MLT2B1 LTR ERVL 278 477 -43 263 151 75 0 chr2 245500748 245500801 -5187053 + MLT2B1 LTR ERVL 454 510 -5 1097 156 12 0 chr2 245502247 245502414 -5185440 - AluJ SINE Alu -14 298 130 9037 27 0 0 chr2 245502430 245503509 -5184345 - L1PA3 LINE L1 -1677 4469 3391 8352 16 1 0 chr2 245503509 245505198 -5182656 + L1PA3 LINE L1 4466 6155 0 817 144 8 8 chr2 245505207 245505332 -5182522 - AluJ SINE Alu -186 126 2 348 291 25 19 chr2 245505993 245506151 -5181703 - L2 LINE L2 -617 2697 2539 1288 239 29 6 chr2 245507235 245507582 -5180272 - L1M4 LINE L1 -860 5286 4932 812 138 0 23 chr2 245507628 245507758 -5180096 - AluJ SINE Alu -179 133 7 793 274 99 18 chr2 245509190 245509609 -5178245 - LTR16A LTR ERVL -2 455 2 516 77 0 0 chr2 245509832 245509910 -5177944 + (TA)n Simple_repeat Simple_repeat 1 78 0 1904 131 4 0 chr2 245509911 245510179 -5177675 - AluSx SINE Alu -26 286 18 1135 47 0 0 chr2 245510179 245510306 -5177548 - AluSq/x SINE Alu -185 127 1 6753 45 5 4 chr2 245510697 245511512 -5176342 - L1PA8 LINE L1 0 6172 5357 215 152 22 0 chr2 245512337 245512383 -5175471 + CT-rich Low_complexity Low_complexity 2 48 0 191 250 25 108 chr2 245513012 245513132 -5174722 - L2 LINE L2 -4 3268 3159 * 294 267 30 20 chr2 245513108 245513209 -5174645 + MIR SINE MIR 44 145 -117 491 304 28 0 chr2 245513226 245513407 -5174447 - MIR SINE MIR -21 241 56 1325 155 0 18 chr2 245513744 245513963 -5173891 + AluJb SINE Alu 85 299 -13 1534 78 2 3 chr2 245514062 245514252 -5173602 - L1PA4 LINE L1 -3095 3051 2862 20517 31 6 0 chr2 245514252 245517344 -5170510 + L1PA4 LINE L1 3045 6152 -3 1534 78 2 3 chr2 245517344 245517365 -5170489 - L1P LINE L1 -3284 2862 2842 15911 164 32 17 chr2 245517654 245519725 -5168129 - L1MA9 LINE L1 -10 6190 4150 868 119 0 0 chr2 245519725 245519843 -5168011 - FLAM_C SINE Alu -15 118 1 15911 164 32 17 chr2 245519843 245521902 -5165952 - L1MA9 LINE L1 -2050 4150 2004 1315 208 32 9 chr2 245521907 245522229 -5165625 - L1MA9 LINE L1 -4856 1099 775 243 0 0 0 chr2 245523335 245523362 -5164492 + (CA)n Simple_repeat Simple_repeat 2 28 0 1188 286 114 9 chr2 245523556 245523996 -5163858 - L1MC4a LINE L1 -1880 5928 5443 249 238 12 83 chr2 245524122 245524206 -5163648 + MER58A DNA MER1_type 19 96 -11 3873 197 19 27 chr2 245524207 245524349 -5163505 - L1MB8 LINE L1 -55 6123 5981 2629 139 3 0 chr2 245524349 245524723 -5163131 - THE1C LTR MaLR 0 375 1 3873 197 19 27 chr2 245524723 245525585 -5162269 - L1MB8 LINE L1 -197 5981 5128 1183 276 68 76 chr2 245525590 245527406 -5160448 - L1MC4a LINE L1 -745 5401 3634 22 35 0 0 chr2 245527414 245527443 -5160411 + AT_rich Low_complexity Low_complexity 1 29 0 536 288 52 52 chr2 245527554 245527809 -5160045 - MIR SINE MIR -13 249 5 1033 195 17 48 chr2 245528447 245528574 -5159280 + MER58A DNA MER1_type 1 119 -2301 1828 149 128 15 chr2 245528574 245528910 -5158944 - THE1C LTR MaLR -1 374 1 1033 195 17 48 chr2 245528910 245529013 -5158841 + MER58A DNA MER1_type 119 224 0 407 302 81 37 chr2 245529035 245529333 -5158521 - L1ME LINE L1 -458 5663 5353 234 231 145 8 chr2 245529591 245529708 -5158146 - L1P LINE L1 -1113 5033 4901 334 300 33 11 chr2 245529797 245529967 -5157887 + MIR SINE MIR 22 262 0 8876 21 0 5 chr2 245530081 245531829 -5156025 - L1PA3 LINE L1 -4 6151 4409 5383 25 2 0 chr2 245531829 245532471 -5155383 + L1P LINE L1 2613 3255 -2891 363 252 46 69 chr2 245532537 245532755 -5155099 - L1ME LINE L1 -1525 4621 4409 24 0 0 0 chr2 245532978 245533002 -5154852 + AT_rich Low_complexity Low_complexity 1 24 0 194 375 154 0 chr2 245533055 245533159 -5154695 - L2 LINE L2 -15 3298 3179 237 262 70 87 chr2 245533518 245533690 -5154164 - L1ME LINE L1 -2085 4061 3893 557 198 16 8 chr2 245534970 245535091 -5152763 - Charlie1a DNA MER1_type -4 1451 1330 833 233 0 0 chr2 245535091 245535250 -5152604 + FRAM SINE Alu 1 159 -17 4710 221 62 35 chr2 245535251 245536326 -5151528 - Charlie1a DNA MER1_type -1421 1340 222 5685 91 8 11 chr2 245536326 245537435 -5150419 - L1PA10 LINE L1 -15 6153 5047 4710 221 62 35 chr2 245537435 245537660 -5150194 - Charlie1a DNA MER1_type -2539 222 5 352 236 284 0 chr2 245537705 245537853 -5150001 - L3 LINE CR1 -110 1467 1278 214 347 41 33 chr2 245537917 245538038 -5149816 - L2 LINE L2 0 3313 3192 31 0 0 0 chr2 245538455 245538486 -5149368 + AT_rich Low_complexity Low_complexity 1 31 0 1922 138 0 24 chr2 245538486 245538776 -5149078 - AluSx SINE Alu -27 285 3 520 259 168 50 chr2 245540327 245540547 -5147307 + MLT1C LTR MaLR 18 263 -127 235 81 54 0 chr2 245540544 245540581 -5147273 + Charlie3 DNA MER1_type 2668 2706 -4 * 221 118 0 0 chr2 245540621 245540655 -5147199 - L2 LINE L2 -592 2722 2689 310 299 0 13 chr2 245541433 245541510 -5146344 - L2 LINE L2 -261 3052 2977 318 119 0 68 chr2 245541514 245541573 -5146281 - AluJb SINE Alu -4 297 243 1530 106 0 0 chr2 245541575 245541774 -5146080 - AluJb SINE Alu -113 199 1 279 274 22 44 chr2 245541928 245541993 -5145861 + MER94 DNA DNA 3 68 -66 2461 83 0 0 chr2 245541993 245542294 -5145560 - AluSx SINE Alu -7 305 5 279 274 22 44 chr2 245542294 245542363 -5145491 + MER94 DNA DNA 68 134 0 321 242 101 0 chr2 245542363 245542462 -5145392 - L2 LINE L2 -523 2791 2683 2403 88 0 3 chr2 245543448 245543756 -5144098 - AluSc SINE Alu -2 307 1 334 315 73 0 chr2 245544030 245544195 -5143659 - L1M4 LINE L1 -1494 4652 4476 189 74 0 0 chr2 245544498 245544525 -5143329 + (TA)n Simple_repeat Simple_repeat 2 28 0 295 264 118 9 chr2 245544563 245544673 -5143181 - L2 LINE L2 0 3313 3192 22 0 0 0 chr2 245544696 245544718 -5143136 + AT_rich Low_complexity Low_complexity 1 22 0 224 293 10 91 chr2 245544941 245545040 -5142814 + MIR3 SINE MIR 68 158 -50 24 0 0 0 chr2 245545981 245546005 -5141849 + AT_rich Low_complexity Low_complexity 1 24 0 2325 84 0 7 chr2 245546783 245547080 -5140774 - AluSx SINE Alu -17 295 1 311 310 40 20 chr2 245547969 245548069 -5139785 + MIR SINE MIR 47 148 -60 217 211 58 0 chr2 245548101 245548153 -5139701 + CT-rich Low_complexity Low_complexity 3 57 0 226 372 21 0 chr2 245548387 245548481 -5139373 + MIR SINE MIR 34 129 -79 267 237 16 0 chr2 245548837 245548905 -5138949 + L1ME1 LINE L1 6095 6163 -1 1061 207 35 30 chr2 245549305 245549537 -5138317 - MIR SINE MIR -10 252 20 908 216 9 28 chr2 245550326 245550539 -5137315 - MER3 DNA MER1_type 0 209 1 1383 202 169 38 chr2 245550639 245551084 -5136770 + MLT1D LTR MaLR 1 503 -2 193 180 56 124 chr2 245551086 245551175 -5136679 + MIR SINE MIR 180 262 0 2166 119 3 0 chr2 245551902 245552197 -5135657 + AluSx SINE Alu 1 296 -16 279 237 0 21 chr2 245552364 245552461 -5135393 + L1ME4a LINE L1 5383 5477 -2331 270 320 21 0 chr2 245552612 245552709 -5135145 - L1MC4 LINE L1 -1330 6712 6614 201 147 0 0 chr2 245552710 245552744 -5135110 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 293 256 0 0 chr2 245552748 245552834 -5135020 - L1MC4 LINE L1 -1342 6700 6615 * 500 231 98 17 chr2 245552824 245552997 -5134857 + L1ME4a LINE L1 5935 6121 0 2100 135 0 3 chr2 245553888 245554192 -5133662 - AluSx SINE Alu -7 305 3 590 232 152 0 chr2 245554831 245554982 -5132872 - MIR SINE MIR -87 175 2 2135 113 3 0 chr2 245555529 245555834 -5132020 + AluSx SINE Alu 2 307 0 22 0 0 0 chr2 245556081 245556103 -5131751 + AT_rich Low_complexity Low_complexity 1 22 0 456 228 0 9 chr2 245556292 245556406 -5131448 - L1MA10 LINE L1 -8 6326 6214 1360 250 82 27 chr2 245556836 245557366 -5130488 - MLT1E LTR MaLR 0 593 1 2306 134 77 55 chr2 245557785 245558202 -5129652 + MSTB LTR MaLR 1 426 0 328 288 177 31 chr2 245559532 245559557 -5128297 - HAL1 LINE L1 -728 1779 1759 2769 149 24 5 chr2 245559557 245559973 -5127881 - MSTB LTR MaLR 0 426 3 328 288 177 31 chr2 245559973 245560405 -5127449 - HAL1 LINE L1 -748 1759 1255 1570 194 21 3 chr2 245561241 245561530 -5126324 - AluJb SINE Alu -18 294 1 2348 95 3 13 chr2 245562328 245562643 -5125211 - AluSx SINE Alu 0 312 1 209 287 46 23 chr2 245562643 245562730 -5125124 + MIR SINE MIR 63 151 -111 301 229 16 0 chr2 245563591 245563652 -5124202 + MIR SINE MIR 156 217 -45 922 159 55 14 chr2 245564616 245564761 -5123093 + FRAM SINE Alu 1 151 -15 457 245 165 5 chr2 245565252 245565440 -5122414 - MIR SINE MIR -15 247 30 224 191 32 0 chr2 245569666 245569729 -5118125 + (CA)n Simple_repeat Simple_repeat 2 66 0 * 264 213 28 35 chr2 245569695 245569836 -5118018 + C-rich Low_complexity Low_complexity 1 140 0 2183 117 3 0 chr2 245570062 245570362 -5117492 - AluSx SINE Alu -11 301 1 1643 241 81 57 chr2 245570695 245570970 -5116884 - L1ME3A LINE L1 -6 6164 5897 2762 155 0 29 chr2 245570970 245571416 -5116438 - Tigger2a DNA MER2_type 0 434 2 1643 241 81 57 chr2 245571416 245571722 -5116132 - L1ME3A LINE L1 -273 5897 5569 564 291 130 21 chr2 245572228 245572562 -5115292 - MLT1I LTR MaLR -19 390 15 295 305 182 5 chr2 245573261 245573448 -5114406 + MIR SINE MIR 32 251 -11 185 111 56 0 chr2 245573621 245573657 -5114197 - L2 LINE L2 -1 3271 3234 318 144 0 184 chr2 245574145 245574231 -5113623 + L1MC4a LINE L1 6553 6611 -1197 393 22 0 0 chr2 245574231 245574277 -5113577 + (TG)n Simple_repeat Simple_repeat 2 47 0 318 144 0 184 chr2 245574277 245574315 -5113539 + L1MC4a LINE L1 6611 6654 -1154 189 333 13 0 chr2 245574790 245574865 -5112989 - L2 LINE L2 -904 2410 2335 426 328 113 28 chr2 245575144 245575321 -5112533 - L2 LINE L2 -1 3271 3080 1971 153 66 45 chr2 245576040 245576420 -5111434 + MLT1B LTR MaLR 3 390 0 201 371 98 23 chr2 245576475 245576607 -5111247 - L2 LINE L2 -182 3090 2949 237 178 0 0 chr2 245578200 245578245 -5109609 + (TGG)n Simple_repeat Simple_repeat 1 45 0 207 69 0 0 chr2 245578247 245578276 -5109578 + (GA)n Simple_repeat Simple_repeat 1 29 0 185 290 16 16 chr2 245578447 245578509 -5109345 - L2 LINE L2 -2936 378 317 2728 102 19 8 chr2 245578899 245579270 -5108584 - THE1C LTR MaLR 0 375 1 8179 103 4 9 chr2 245579568 245580786 -5107068 + L1P LINE L1 1986 3197 -2949 639 193 15 0 chr2 245580920 245581055 -5106799 + L1MB1 LINE L1 5814 5950 -218 * 3029 180 21 3 chr2 245581047 245581918 -5105936 - L1P4 LINE L1 -563 5603 4721 1385 161 0 29 chr2 245581916 245582158 -5105696 + L1P4 LINE L1 5581 5815 -351 * 1394 107 5 10 chr2 245582277 245582483 -5105371 - L1P3 LINE L1 -6254 207 3 1537 187 0 26 chr2 245582609 245582919 -5104935 + AluJo SINE Alu 1 302 -10 450 0 0 0 chr2 245585162 245585212 -5102642 + (TA)n Simple_repeat Simple_repeat 1 50 0 197 297 59 50 chr2 245585730 245585831 -5102023 - L2 LINE L2 -96 3176 3075 22 0 0 0 chr2 245586566 245586588 -5101266 + AT_rich Low_complexity Low_complexity 1 22 0 288 342 40 13 chr2 245586610 245586759 -5101095 - MIR SINE MIR -76 186 34 784 210 26 51 chr2 245587000 245587271 -5100583 - THE1B LTR MaLR 0 364 104 233 162 10 101 chr2 245587626 245587725 -5100129 + MER53 DNA DNA 93 182 -7 * 358 171 14 0 chr2 245587671 245587741 -5100113 - MER53 DNA DNA -118 71 1 189 296 257 20 chr2 245587751 245587903 -5099951 - MIR SINE MIR -58 204 17 1319 93 56 51 chr2 245588124 245588340 -5099514 + MER20 DNA MER1_type 1 217 -2 213 39 0 0 chr2 245588478 245588504 -5099350 + (TA)n Simple_repeat Simple_repeat 2 27 0 1427 224 28 3 chr2 245589127 245589413 -5098441 + AluJb SINE Alu 2 294 -8 2432 70 0 10 chr2 245591121 245591419 -5096435 - AluY SINE Alu -16 295 1 887 186 10 57 chr2 245591421 245591614 -5096240 - Tigger1 DNA MER2_type -2234 184 1 22 35 0 0 chr2 245591995 245592024 -5095830 + AT_rich Low_complexity Low_complexity 1 29 0 894 274 28 12 chr2 245592131 245592379 -5095475 - MIR SINE MIR -10 252 1 332 305 40 28 chr2 245592473 245592661 -5095193 - L1ME LINE L1 -535 5586 5386 878 287 0 39 chr2 245592691 245592945 -5094909 - MIR SINE MIR -2 260 17 598 191 53 34 chr2 245593628 245593826 -5094028 + MLT1E1 LTR MaLR 5 260 -394 1250 232 16 0 chr2 245593871 245594117 -5093737 + MLT1E1 LTR MaLR 405 654 0 846 241 20 0 chr2 245594200 245594395 -5093459 - MLT1B LTR MaLR 0 390 192 5139 57 1 0 chr2 245594469 245595122 -5092732 + L1P LINE L1 4197 4850 -1296 2563 231 63 33 chr2 245595226 245596196 -5091658 + L1MEc LINE L1 2179 3157 -3058 407 284 34 54 chr2 245596206 245596410 -5091444 + L1MEc LINE L1 3292 3491 -2724 1529 228 139 11 chr2 245596585 245596824 -5091030 - L1MC4 LINE L1 -1099 6943 6736 240 35 0 0 chr2 245596824 245596853 -5091001 + (CA)n Simple_repeat Simple_repeat 1 29 0 1529 228 139 11 chr2 245596853 245597051 -5090803 - L1MC4 LINE L1 -1306 6736 6450 2018 174 141 20 chr2 245597055 245597119 -5090735 - MLT1D LTR MaLR -2 503 448 2119 126 3 0 chr2 245597119 245597421 -5090433 + AluSx SINE Alu 1 303 -9 2018 174 141 20 chr2 245597421 245597803 -5090051 - MLT1D LTR MaLR -57 448 3 734 150 0 0 chr2 245599346 245599466 -5088388 + L1MB3 LINE L1 5795 5914 -269 1318 288 145 15 chr2 245599590 245600184 -5087670 + L2 LINE L2 1710 2380 -934 525 200 242 39 chr2 245600231 245600445 -5087409 + MIR SINE MIR 23 262 0 183 246 0 0 chr2 245600856 245600913 -5086941 + GA-rich Low_complexity Low_complexity 5 61 0 459 303 53 0 chr2 245601509 245601697 -5086157 - L1MCc LINE L1 -4891 1532 1335 713 271 85 25 chr2 245601714 245601950 -5085904 - L1MCc LINE L1 -5200 1223 974 1198 311 71 19 chr2 245602048 245602637 -5085217 - L1MCc LINE L1 -5753 670 51 289 136 107 48 chr2 245602663 245602766 -5085088 - Charlie7 DNA MER1_type -61 2551 2443 21 36 0 0 chr2 245603626 245603654 -5084200 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr2 245603674 245603713 -5084141 + AT_rich Low_complexity Low_complexity 1 39 0 840 218 59 64 chr2 245604433 245604653 -5083201 - MER20 DNA MER1_type 0 219 1 349 263 91 22 chr2 245605249 245605413 -5082441 + MIR SINE MIR 22 153 -55 369 86 0 0 chr2 245605437 245605495 -5082359 + (CA)n Simple_repeat Simple_repeat 2 59 0 218 401 4 38 chr2 245606913 245607177 -5080677 + L2 LINE L2 2490 2744 -570 1085 284 57 0 chr2 245607881 245608212 -5079642 + MLT1E1 LTR MaLR 305 654 0 294 346 56 0 chr2 245609757 245609864 -5077990 + L2 LINE L2 3157 3269 -3 2608 149 21 2 chr2 245610159 245610581 -5077273 + L1PA16 LINE L1 5726 6155 -11 6934 56 11 20 chr2 245610720 245611598 -5076256 + L1PA7 LINE L1 5284 6153 -1 21 0 0 0 chr2 245611908 245611929 -5075925 + AT_rich Low_complexity Low_complexity 1 21 0 358 327 200 0 chr2 245612053 245612203 -5075651 + MER5A DNA MER1_type 9 188 -1 181 211 308 0 chr2 245612311 245612363 -5075491 + MIR SINE MIR 48 115 -147 255 276 0 23 chr2 245612515 245612602 -5075252 + MLT1I LTR MaLR 310 394 -15 221 292 0 0 chr2 245613842 245613890 -5073964 + polypyrimidine Low_complexity Low_complexity 4 51 0 232 186 0 97 chr2 245614868 245614981 -5072873 + C-rich Low_complexity Low_complexity 5 106 0 381 308 82 11 chr2 245615166 245615348 -5072506 - L3 LINE CR1 -1158 419 225 662 264 7 11 chr2 245616811 245617042 -5070812 + L1MB5 LINE L1 5758 5989 -195 2546 35 10 10 chr2 245617302 245617612 -5070242 - AluYa5 SINE Alu -1 310 1 2197 170 11 11 chr2 245619137 245619508 -5068346 + MLT1C LTR MaLR 97 467 0 386 323 37 43 chr2 245619664 245619825 -5068029 + L2 LINE L2 3111 3270 -2 305 367 57 19 chr2 245619936 245620094 -5067760 - L2 LINE L2 -28 3244 3081 2223 175 18 5 chr2 245620699 245621082 -5066772 - MLT1B LTR MaLR 0 390 3 759 226 12 6 chr2 245621518 245621686 -5066168 - LTR41 LTR ERVL -596 177 9 235 304 47 54 chr2 245621702 245621850 -5066004 - L3 LINE CR1 -7 1570 1424 566 270 161 47 chr2 245622201 245622542 -5065312 + MLT1K LTR MaLR 191 570 -18 542 254 129 47 chr2 245623125 245623357 -5064497 + MLT1L LTR MaLR 341 591 -24 462 221 142 16 chr2 245623402 245623529 -5064325 - HAL1b LINE L1 -808 540 398 529 245 35 7 chr2 245623535 245623678 -5064176 - HAL1b LINE L1 -1001 347 201 2079 105 10 3 chr2 245624023 245624319 -5063535 + AluSx SINE Alu 4 301 -11 210 182 0 23 chr2 245625546 245625590 -5062264 - MIR SINE MIR -106 156 114 351 216 14 34 chr2 245626036 245626184 -5061670 + C-rich Low_complexity Low_complexity 3 147 0 23 68 0 0 chr2 245626757 245626801 -5061053 + AT_rich Low_complexity Low_complexity 1 44 0 372 308 23 8 chr2 245627048 245627181 -5060673 + L2 LINE L2 1680 1814 -1500 273 289 186 6 chr2 245627781 245627937 -5059917 - MIR SINE MIR -56 206 23 442 61 45 0 chr2 245628006 245628072 -5059782 + AluSc SINE Alu 229 297 -12 920 298 47 43 chr2 245628194 245628920 -5058934 - L1MEd LINE L1 -4864 1255 403 458 216 14 34 chr2 245630035 245630183 -5057671 + L1ME2 LINE L1 4405 4549 -1597 2656 184 64 0 chr2 245630217 245630716 -5057138 - L1MB1 LINE L1 -1 6167 5637 1700 172 25 54 chr2 245630717 245631302 -5056552 + L1M3 LINE L1 5021 5597 -737 532 278 53 0 chr2 245631694 245631881 -5055973 + MER69 DNA AcHobo 51 247 -2279 250 273 45 0 chr2 245631876 245631964 -5055890 + MER69 DNA AcHobo 2435 2526 0 * 254 199 287 7 chr2 245632034 245632170 -5055684 - LTR33 LTR ERVL -336 185 12 659 225 35 23 chr2 245633016 245633189 -5054665 + L1M3 LINE L1 5491 5665 -669 * 1170 268 55 11 chr2 245633178 245633558 -5054296 + L1ME2 LINE L1 4526 4922 -1224 750 228 121 5 chr2 245633527 245633733 -5054121 + L1ME2 LINE L1 5935 6164 0 * 502 273 20 8 chr2 245634574 245634819 -5053035 - L1MC4 LINE L1 0 8042 7715 1007 217 38 33 chr2 245634871 245635229 -5052625 + MER66A LTR ERV1 169 438 -40 1223 261 73 5 chr2 245635275 245635670 -5052184 - L1MC4 LINE L1 -383 7659 7238 340 198 16 70 chr2 245635760 245635947 -5051907 + A-rich Low_complexity Low_complexity 2 178 0 238 180 0 16 chr2 245637160 245637221 -5050633 + L1ME4a LINE L1 6058 6117 -4 879 135 29 120 chr2 245637583 245637791 -5050063 - MER53 DNA DNA 0 189 1 356 331 84 49 chr2 245638267 245638530 -5049324 - L2 LINE L2 -445 2869 2598 2077 122 7 3 chr2 245639288 245639584 -5048270 + AluSx SINE Alu 3 299 -13 2748 108 31 0 chr2 245641443 245641795 -5046059 + THE1B LTR MaLR 2 364 0 285 318 56 0 chr2 245642169 245642276 -5045578 + MER94 DNA DNA 22 134 0 912 177 24 0 chr2 245642565 245642729 -5045125 - MSTD LTR MaLR 0 396 229 328 306 66 66 chr2 245643005 245643306 -5044548 - MARNA DNA Mariner -224 362 62 21 0 0 0 chr2 245643934 245643955 -5043899 + AT_rich Low_complexity Low_complexity 1 21 0 188 304 0 76 chr2 245644378 245644457 -5043397 + L2 LINE L2 3199 3271 -1 318 274 57 40 chr2 245645031 245645155 -5042699 + L1ME3A LINE L1 4144 4269 -1877 966 287 92 53 chr2 245645283 245645609 -5042245 + L1ME3A LINE L1 4326 4638 -1532 945 189 6 6 chr2 245645609 245645768 -5042086 - FRAM SINE Alu -6 160 2 966 287 92 53 chr2 245645768 245646290 -5041564 + L1ME3A LINE L1 4638 5138 -1032 2526 40 0 10 chr2 245646290 245646587 -5041267 + AluY SINE Alu 1 294 -17 966 287 92 53 chr2 245646587 245647246 -5040608 + L1ME3A LINE L1 5138 5873 -297 399 168 32 0 chr2 245647271 245647366 -5040488 + (TA)n Simple_repeat Simple_repeat 1 98 0 243 0 0 0 chr2 245647368 245647395 -5040459 + (TG)n Simple_repeat Simple_repeat 2 28 0 352 272 100 67 chr2 245647499 245647679 -5040175 + L1ME3A LINE L1 5954 6139 -23 251 274 16 0 chr2 245647718 245647780 -5040074 + GA-rich Low_complexity Low_complexity 3 65 0 231 125 0 0 chr2 245648198 245648238 -5039616 + (TCTCCC)n Simple_repeat Simple_repeat 4 43 0 830 265 99 18 chr2 245651256 245651560 -5036294 - LTR16C LTR ERVL -2 489 148 236 254 98 40 chr2 245651723 245651896 -5035958 + L1ME LINE L1 5407 5589 -532 852 159 0 125 chr2 245653773 245653981 -5033873 - MER53 DNA DNA -1 188 7 1098 176 33 60 chr2 245654030 245654329 -5033525 - L1ME2 LINE L1 -206 5960 5676 189 0 0 0 chr2 245654329 245654350 -5033504 + (TC)n Simple_repeat Simple_repeat 2 22 0 1098 176 33 60 chr2 245654350 245654376 -5033478 - L1ME2 LINE L1 -490 5676 5651 2216 123 3 0 chr2 245654376 245654686 -5033168 - AluSx SINE Alu -1 311 1 315 162 0 0 chr2 245654686 245654745 -5033109 - Alu SINE Alu -256 44 1 1164 213 8 35 chr2 245654745 245654786 -5033068 - L1ME2 LINE L1 -515 5651 5610 2459 135 25 0 chr2 245654786 245655141 -5032713 - THE1B LTR MaLR 0 364 1 1164 213 8 35 chr2 245655141 245655353 -5032501 - L1ME2 LINE L1 -556 5610 5405 400 193 16 64 chr2 245655552 245655739 -5032115 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 6577 183 33 9 chr2 245655986 245657915 -5029939 + L1M3f LINE L1 14 1979 -4066 233 317 158 0 chr2 245659204 245659305 -5028549 + MIR3 SINE MIR 14 130 -78 224 299 86 17 chr2 245659406 245659523 -5028331 - MER5B DNA MER1_type -51 127 3 424 231 34 43 chr2 245660573 245660690 -5027164 + MLT1C LTR MaLR 1 116 -389 257 143 0 0 chr2 245660702 245660744 -5027110 + MSTD LTR MaLR 1 42 -354 988 142 19 0 chr2 245660744 245660906 -5026948 + MSTD LTR MaLR 232 396 0 794 240 222 24 chr2 245660906 245661187 -5026667 + MLT1C LTR MaLR 168 467 0 237 83 0 0 chr2 245661200 245661236 -5026618 + (CA)n Simple_repeat Simple_repeat 1 36 0 2247 108 24 0 chr2 245661846 245662142 -5025712 - AluSq SINE Alu -10 303 1 201 380 96 0 chr2 245664231 245664397 -5023457 + MER5A DNA MER1_type 7 188 -1 987 172 103 10 chr2 245664402 245664605 -5023249 - MER58A DNA MER1_type -1 223 2 247 376 68 0 chr2 245664605 245664722 -5023132 + L2 LINE L2 3148 3272 0 919 259 71 48 chr2 245665955 245666340 -5021514 + MLT1C LTR MaLR 6 404 -63 2451 63 0 19 chr2 245666340 245666655 -5021199 - AluY SINE Alu -2 309 1 919 259 71 48 chr2 245666655 245666705 -5021149 + MLT1C LTR MaLR 404 451 -16 181 240 168 64 chr2 245667296 245667421 -5020433 - MER5B DNA MER1_type -1 177 40 184 169 17 17 chr2 245667992 245668051 -5019803 + (TG)n Simple_repeat Simple_repeat 1 59 0 1515 191 14 14 chr2 245669322 245669599 -5018255 + AluJo SINE Alu 1 277 -35 892 78 78 0 chr2 245670369 245670498 -5017356 - MER85 DNA T2_type 0 139 1 580 177 204 0 chr2 245670503 245670650 -5017204 - L1MB7 LINE L1 -19 6165 5989 269 226 0 0 chr2 245670844 245670897 -5016957 + MIR SINE MIR 188 240 -22 329 261 56 31 chr2 245671414 245671575 -5016279 - AluSg/x SINE Alu 0 302 138 620 316 127 14 chr2 245671953 245672307 -5015547 - L2 LINE L2 -1 3312 2919 941 249 98 46 chr2 245672664 245673168 -5014686 + MER51C LTR ERV1 1 640 0 442 293 94 16 chr2 245673168 245673359 -5014495 + LTR16A1 LTR ERVL 235 440 -17 493 338 40 5 chr2 245673449 245673650 -5014204 + MIR SINE MIR 12 219 -43 1676 200 154 5 chr2 245673985 245674434 -5013420 + MER34 LTR ERV1 27 542 0 406 234 64 8 chr2 245675143 245675381 -5012473 + MER34 LTR ERV1 27 390 -152 499 28 0 28 chr2 245675382 245675453 -5012401 + (TTCC)n Simple_repeat Simple_repeat 3 71 0 386 179 30 8 chr2 245675471 245675605 -5012249 + CT-rich Low_complexity Low_complexity 1 137 0 243 114 0 0 chr2 245675620 245675664 -5012190 + (TTCC)n Simple_repeat Simple_repeat 3 46 0 2269 96 26 7 chr2 245675682 245675984 -5011870 - AluSg SINE Alu -2 308 1 711 170 121 0 chr2 245675984 245676125 -5011729 + MER34 LTR ERV1 385 542 0 368 254 7 21 chr2 245676546 245676688 -5011166 + G-rich Low_complexity Low_complexity 4 143 0 496 319 46 25 chr2 245678826 245679067 -5008787 + MIR SINE MIR 15 260 -2 1826 78 4 4 chr2 245681818 245682074 -5005780 - L1PA10 LINE L1 -6 6162 5907 583 186 192 12 chr2 245685498 245685670 -5002184 - MER3 DNA MER1_type -6 203 1 1538 239 48 21 chr2 245686127 245686563 -5001291 - MLT1C LTR MaLR -18 449 2 303 301 131 42 chr2 245686576 245687004 -5000850 + LTR33 LTR ERVL 47 512 -9 1099 219 7 49 chr2 245687476 245687763 -5000091 - MLT1B LTR MaLR 0 390 116 719 197 42 16 chr2 245687800 245688087 -4999767 - MLT1B LTR MaLR 0 390 2 181 250 62 16 chr2 245688772 245688836 -4999018 + L2 LINE L2 3205 3271 -1 1356 221 63 29 chr2 245689496 245689680 -4998174 - MLT1B LTR MaLR -11 379 203 234 0 0 0 chr2 245689680 245689706 -4998148 + (TG)n Simple_repeat Simple_repeat 1 26 0 1356 221 63 29 chr2 245689706 245689869 -4997985 - MLT1B LTR MaLR -187 203 20 264 324 65 0 chr2 245691257 245691365 -4996489 + MLT1G1 LTR MaLR 1 115 -480 2449 89 0 10 chr2 245691645 245691959 -4995895 - AluY SINE Alu 0 311 1 208 196 43 0 chr2 245696654 245696700 -4991154 + MIR SINE MIR 102 149 -113 708 228 74 14 chr2 245696817 245697032 -4990822 + MER45C DNA AcHobo 1 228 -725 565 253 253 0 chr2 245697075 245697269 -4990585 + MER45C DNA AcHobo 711 953 0 973 278 51 41 chr2 245697397 245697811 -4990043 - MLT1C LTR MaLR -8 459 42 309 236 28 0 chr2 245698154 245698226 -4989628 - L2 LINE L2 -5 3308 3235 376 391 36 8 chr2 245698505 245698758 -4989096 + L1MC4a LINE L1 5696 5955 -1853 247 200 40 53 chr2 245698799 245698874 -4988980 + L1ME4a LINE L1 5952 6025 -96 372 241 0 0 chr2 245700004 245700083 -4987771 + L3 LINE CR1 1386 1464 -113 216 306 74 0 chr2 245700098 245700206 -4987648 + L2 LINE L2 3157 3272 0 1690 219 53 49 chr2 245700314 245700806 -4987048 - MLT1D LTR MaLR -6 499 6 309 283 0 22 chr2 245700993 245701085 -4986769 + L2 LINE L2 3181 3270 -2 195 200 111 0 chr2 245702104 245702149 -4985705 - L2 LINE L2 0 3313 3264 310 314 48 33 chr2 245704812 245705022 -4982832 + L3 LINE CR1 603 815 -762 1973 164 0 3 chr2 245705547 245705857 -4981997 - AluJo SINE Alu -3 309 1 251 315 11 0 chr2 245706322 245706414 -4981440 + L3 LINE CR1 1427 1519 -58 353 349 36 26 chr2 245708913 245709105 -4978749 + L2 LINE L2 3120 3313 0 293 319 65 30 chr2 245709527 245709696 -4978158 + MIR SINE MIR 56 230 -32 1046 235 187 23 chr2 245711418 245711852 -4976002 - MLT1D LTR MaLR 0 505 1 216 0 0 0 chr2 245712799 245712823 -4975031 + (T)n Simple_repeat Simple_repeat 1 24 0 306 311 33 0 chr2 245713316 245713406 -4974448 - MIR SINE MIR -16 246 154 372 264 65 13 chr2 245714234 245714389 -4973465 - L1MD3 LINE L1 -304 7691 7529 204 40 0 0 chr2 245716405 245716430 -4971424 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 216 0 0 0 chr2 245717179 245717203 -4970651 + (A)n Simple_repeat Simple_repeat 1 24 0 288 91 0 0 chr2 245718721 245718765 -4969089 + (CA)n Simple_repeat Simple_repeat 2 45 0 459 155 0 33 chr2 245720971 245721152 -4966702 + (TG)n Simple_repeat Simple_repeat 2 176 0 180 176 0 33 chr2 245721166 245721257 -4966597 + (TG)n Simple_repeat Simple_repeat 1 88 0 277 312 91 15 chr2 245721257 245721456 -4966398 - L1MC4a LINE L1 -1914 5894 5681 227 328 222 6 chr2 245724500 245724680 -4963174 - MIR SINE MIR -14 248 30 234 81 0 0 chr2 245727682 245727719 -4960135 + (TA)n Simple_repeat Simple_repeat 1 37 0 344 345 23 29 chr2 245731619 245731790 -4956064 + MIR SINE MIR 74 243 -19 807 214 18 0 chr2 245731936 245732104 -4955750 + MER20 DNA MER1_type 7 177 -42 1336 152 99 78 chr2 245732105 245732525 -4955329 + THE1B LTR MaLR 1 364 0 251 318 112 45 chr2 245732962 245733141 -4954713 + MIR SINE MIR 16 206 -56 1260 227 27 57 chr2 245735997 245736367 -4951487 - MLT1A2 LTR MaLR 0 374 16 1127 224 112 40 chr2 245736692 245737121 -4950733 - MLT1C LTR MaLR -2 465 6 732 317 90 22 chr2 245737463 245737962 -4949892 - HAL1 LINE L1 -1590 917 385 390 123 71 18 chr2 245738859 245739029 -4948825 + (TG)n Simple_repeat Simple_repeat 2 180 0 384 164 53 18 chr2 245739059 245739230 -4948624 + (TG)n Simple_repeat Simple_repeat 1 177 0 462 96 60 30 chr2 245739277 245739444 -4948410 + (TG)n Simple_repeat Simple_repeat 1 172 0 583 113 61 31 chr2 245739494 245739825 -4948029 + (TG)n Simple_repeat Simple_repeat 1 341 0 2080 81 0 22 chr2 245739961 245740234 -4947620 - AluSx SINE Alu -45 267 1 188 299 143 0 chr2 245740872 245740949 -4946905 - L3 LINE CR1 -431 1146 1059 207 349 12 12 chr2 245740990 245741076 -4946778 + MIR SINE MIR 29 114 -148 547 258 44 15 chr2 245741933 245742135 -4945719 - L1MD3 LINE L1 -304 7691 7393 271 367 94 37 chr2 245742159 245742456 -4945398 - L2 LINE L2 -10 3262 2949 1030 236 4 9 chr2 245744764 245744989 -4942865 - MER58A DNA MER1_type 0 224 1 2271 112 20 0 chr2 245745042 245745345 -4942509 - AluSx SINE Alu -3 309 1 678 151 134 35 chr2 245745425 245745597 -4942257 - MER53 DNA DNA 0 189 1 4433 241 103 18 chr2 245746510 245746870 -4940984 - L1ME1 LINE L1 -197 5969 5641 1985 108 57 46 chr2 245746870 245747241 -4940613 - THE1C LTR MaLR 0 375 1 4433 241 103 18 chr2 245747241 245749346 -4938508 - L1ME1 LINE L1 -525 5641 3298 1859 139 4 4 chr2 245749348 245749622 -4938232 - AluSx SINE Alu -12 300 27 207 356 0 10 chr2 245749641 245749745 -4938109 + CT-rich Low_complexity Low_complexity 1 103 0 609 221 106 62 chr2 245750513 245750739 -4937115 + MIR SINE MIR 27 262 0 2032 114 60 0 chr2 245750891 245751172 -4936682 - AluSq SINE Alu -15 298 1 302 387 24 0 chr2 245752209 245752333 -4935521 + HAL1b LINE L1 67 193 -1155 391 290 30 61 chr2 245752598 245752860 -4934994 + L1M4 LINE L1 2687 2940 -3206 343 356 144 5 chr2 245752861 245753083 -4934771 + L1ME4a LINE L1 5672 5924 -197 714 216 32 22 chr2 245754641 245754826 -4933028 + MER53 DNA DNA 3 189 0 290 143 0 0 chr2 245754867 245754916 -4932938 + MADE1 DNA Mariner 2 50 -30 695 148 111 9 chr2 245755048 245755265 -4932589 - AluSx SINE Alu -51 261 23 411 172 14 154 chr2 245755375 245755596 -4932258 - L1MCc LINE L1 -2988 3953 3764 837 121 17 0 chr2 245755612 245755728 -4932126 - AluJb SINE Alu -194 118 1 2097 251 62 21 chr2 245755728 245756529 -4931325 - L1MCc LINE L1 -3172 3769 2936 4611 213 25 6 chr2 245756538 245757547 -4930307 - Tigger6a DNA MER2_type -1 1082 55 635 268 22 55 chr2 245757547 245757806 -4930048 - L1MCc LINE L1 -5252 1170 797 896 298 72 62 chr2 245757881 245758448 -4929406 - L1MCc LINE L1 -5471 951 379 213 309 62 0 chr2 245760143 245760240 -4927614 - MIR3 SINE MIR -6 202 100 194 342 0 38 chr2 245760317 245760396 -4927458 - MIR SINE MIR -65 143 68 1078 208 9 0 chr2 245762478 245762699 -4925155 + MER58A DNA MER1_type 2 224 0 201 275 100 33 chr2 245763061 245763181 -4924673 + MIR SINE MIR 120 247 -15 478 244 12 0 chr2 245763216 245763388 -4924466 + (TGGG)n Simple_repeat Simple_repeat 3 176 0 189 195 0 0 chr2 245765698 245765739 -4922115 + (TTA)n Simple_repeat Simple_repeat 2 42 0 401 345 24 18 chr2 245766183 245766351 -4921503 - MIR SINE MIR -31 231 63 1972 151 3 7 chr2 245766356 245766674 -4921180 - AluSx SINE Alu 0 317 1 588 279 132 15 chr2 245766860 245767064 -4920790 - MIR SINE MIR -10 252 25 205 192 58 19 chr2 245769699 245769751 -4918103 + CT-rich Low_complexity Low_complexity 2 55 0 2552 88 0 79 chr2 245770128 245770535 -4917319 - MER51B LTR ERV1 -2 375 1 233 306 54 27 chr2 245771047 245771158 -4916696 - MIR SINE MIR -117 145 32 295 264 54 47 chr2 245771471 245771600 -4916254 + MIR SINE MIR 132 261 -1 215 302 146 0 chr2 245772643 245772739 -4915115 + L2 LINE L2 2388 2497 -817 182 362 76 36 chr2 245772770 245773099 -4914755 + L2 LINE L2 2636 2977 -337 336 189 0 0 chr2 245773539 245773613 -4914241 + (TG)n Simple_repeat Simple_repeat 1 74 0 398 130 0 26 chr2 245775798 245775830 -4912024 + (TCCC)n Simple_repeat Simple_repeat 4 35 -43 1587 195 0 30 chr2 245775830 245776127 -4911727 - AluJb SINE Alu -7 305 18 398 130 0 26 chr2 245776127 245776171 -4911683 + (TCCC)n Simple_repeat Simple_repeat 35 78 0 287 236 109 9 chr2 245776248 245776358 -4911496 - L1ME4a LINE L1 0 6121 6001 214 331 110 13 chr2 245776751 245776905 -4910949 + L3 LINE CR1 1059 1227 -350 1428 239 61 47 chr2 245777339 245777437 -4910417 + MLT1D LTR MaLR 27 122 -383 2111 94 4 4 chr2 245777437 245777712 -4910142 - AluSc SINE Alu -6 303 29 1428 239 61 47 chr2 245777712 245778085 -4909769 + MLT1D LTR MaLR 122 505 0 207 0 0 0 chr2 245778556 245778579 -4909275 + (A)n Simple_repeat Simple_repeat 1 23 0 2132 100 10 26 chr2 245778870 245779180 -4908674 + AluSq SINE Alu 1 305 -8 191 111 0 28 chr2 245782089 245782125 -4905729 + (CA)n Simple_repeat Simple_repeat 2 36 0 327 192 0 82 chr2 245782418 245782491 -4905363 - MER96 DNA MER1_type? -1 174 108 334 279 16 25 chr2 245783830 245783952 -4903902 + MIR SINE MIR 72 192 -70 813 212 0 0 chr2 245784464 245784643 -4903211 + (CA)n Simple_repeat Simple_repeat 2 180 0 295 226 11 11 chr2 245784633 245784726 -4903128 + (CATA)n Simple_repeat Simple_repeat 1 93 0 * 272 125 0 0 chr2 245784727 245784775 -4903079 - MER4-int LTR ERV1 -5439 1159 1112 372 189 0 0 chr2 245784775 245784849 -4903005 + (CA)n Simple_repeat Simple_repeat 1 74 0 286 135 0 0 chr2 245784852 245784904 -4902950 - MER4-int LTR ERV1 -5436 1162 1111 240 111 0 0 chr2 245784906 245784942 -4902912 + (CATA)n Simple_repeat Simple_repeat 4 39 0 2098 128 7 0 chr2 245785091 245785416 -4902438 - AluSx SINE Alu 0 312 1 339 328 52 57 chr2 245785436 245785628 -4902226 - L1ME LINE L1 -332 5789 5599 831 233 62 0 chr2 245785632 245785825 -4902029 - MER58A DNA MER1_type -15 209 5 208 371 31 10 chr2 245785874 245785971 -4901883 + L2 LINE L2 2971 3069 -203 322 310 44 0 chr2 245786206 245786319 -4901535 - MIR SINE MIR -75 187 70 471 155 0 0 chr2 245786669 245786753 -4901101 + (CA)n Simple_repeat Simple_repeat 1 84 0 776 256 67 0 chr2 245786945 245787140 -4900714 + MER58A DNA MER1_type 5 212 -12 2309 147 36 5 chr2 245787244 245787658 -4900196 + MSTA LTR MaLR 2 428 0 2075 114 0 31 chr2 245787722 245788039 -4899815 - AluSx SINE Alu -5 307 1 22 0 0 0 chr2 245788041 245788063 -4899791 + AT_rich Low_complexity Low_complexity 1 22 0 2099 134 3 13 chr2 245788415 245788722 -4899132 - AluSx SINE Alu -8 304 1 1512 219 131 24 chr2 245789128 245789561 -4898293 + MLT2B1 LTR ERVL 1 487 -33 320 0 25 0 chr2 245789561 245789601 -4898253 + (CA)n Simple_repeat Simple_repeat 2 42 0 1512 219 131 24 chr2 245789601 245789624 -4898230 + MLT2B1 LTR ERVL 487 506 -14 1820 227 33 37 chr2 245789672 245790161 -4897693 - MLT2B2 LTR ERVL -26 489 3 2399 101 0 0 chr2 245790256 245790553 -4897301 - AluSx SINE Alu -15 297 1 296 248 66 33 chr2 245790635 245790756 -4897098 + MER113 DNA MER1_type? 217 341 -180 238 320 68 54 chr2 245790943 245791090 -4896764 - MER5A DNA MER1_type -1 188 40 694 221 117 36 chr2 245791749 245791971 -4895883 + MLT1C LTR MaLR 228 467 0 222 37 0 0 chr2 245792111 245792138 -4895716 + (CA)n Simple_repeat Simple_repeat 2 28 0 802 279 45 7 chr2 245792373 245792681 -4895173 - MER33 DNA MER1_type 0 324 5 437 318 131 33 chr2 245795771 245796252 -4891602 - L2 LINE L2 -501 2813 2286 518 135 0 10 chr2 245796260 245796356 -4891498 + (TTCC)n Simple_repeat Simple_repeat 2 96 0 1189 112 103 21 chr2 245796374 245796752 -4891102 - MER4B-int LTR ERV1 -645 1149 736 925 67 6 144 chr2 245796752 245796932 -4890922 - L1PA7 LINE L1 -2 6152 5998 486 273 39 32 chr2 245799076 245799230 -4888624 - MER63A DNA MER1_type -3 207 53 1097 188 28 0 chr2 245800550 245800763 -4887091 + MER20 DNA MER1_type 1 219 0 241 340 21 0 chr2 245801007 245801104 -4886750 + L3 LINE CR1 1282 1380 -197 221 252 26 78 chr2 245801143 245801258 -4886596 - L3 LINE CR1 -628 949 841 315 0 0 0 chr2 245802322 245802357 -4885497 + (TTA)n Simple_repeat Simple_repeat 2 36 0 2021 110 4 0 chr2 245802407 245802671 -4885183 + AluSq SINE Alu 1 265 -48 459 13 13 64 chr2 245802671 245802749 -4885105 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 207 255 0 0 chr2 245803080 245803127 -4884727 - MIR SINE MIR -147 115 69 2281 102 0 29 chr2 245803304 245803618 -4884236 + AluSg SINE Alu 5 309 -1 211 347 71 0 chr2 245803859 245803957 -4883897 - MIR SINE MIR -79 183 79 269 376 56 16 chr2 245804037 245804162 -4883692 + L2 LINE L2 3143 3272 0 1869 205 31 43 chr2 245804324 245804832 -4883022 + MLT1D LTR MaLR 1 502 -3 1853 146 0 4 chr2 245804918 245805186 -4882668 - AluJb SINE Alu -23 289 23 211 270 32 0 chr2 245805551 245805614 -4882240 - L2 LINE L2 -2 3270 3206 323 277 101 86 chr2 245805653 245805989 -4881865 - MER102b DNA MER1_type 0 341 1 448 297 160 10 chr2 245806846 245807159 -4880695 + MLT1I LTR MaLR 43 402 -7 2293 93 3 0 chr2 245807277 245807568 -4880286 - AluSc SINE Alu -17 292 1 1126 201 68 70 chr2 245809406 245809789 -4878065 + MLT1B LTR MaLR 1 382 -8 214 329 0 0 chr2 245811037 245811110 -4876744 + (TG)n Simple_repeat Simple_repeat 1 73 0 192 216 0 0 chr2 245811206 245811257 -4876597 + (TG)n Simple_repeat Simple_repeat 1 51 0 570 225 0 0 chr2 245811281 245811459 -4876395 + (TG)n Simple_repeat Simple_repeat 1 178 0 207 188 0 0 chr2 245811474 245811522 -4876332 + (TG)n Simple_repeat Simple_repeat 1 48 0 220 270 112 11 chr2 245812088 245812177 -4875677 - MIR SINE MIR 0 262 165 1805 158 65 19 chr2 245812196 245812518 -4875336 - MER1B DNA MER1_type 0 337 1 457 244 63 31 chr2 245813619 245813746 -4874108 - MIR SINE MIR -61 147 17 275 330 43 16 chr2 245815897 245816082 -4871772 + LTR16C LTR ERVL 287 476 -15 756 286 9 44 chr2 245816148 245816375 -4871479 - MIR SINE MIR 0 262 44 264 236 56 14 chr2 245817295 245817367 -4870487 + MER5B DNA MER1_type 91 165 -13 236 237 7 125 chr2 245818409 245818561 -4869293 + L2 LINE L2 2911 3044 -228 190 360 67 0 chr2 245818639 245818728 -4869126 + L2 LINE L2 3178 3272 0 273 221 0 0 chr2 245819003 245819071 -4868783 + GA-rich Low_complexity Low_complexity 1 68 0 217 219 0 0 chr2 245819072 245819113 -4868741 + (TGGA)n Simple_repeat Simple_repeat 2 42 0 2030 186 65 95 chr2 245820363 245820830 -4867024 - L1MC4a LINE L1 -1 7807 7328 2258 122 3 0 chr2 245820830 245821141 -4866713 + AluSx SINE Alu 1 312 0 2030 186 65 95 chr2 245821141 245821315 -4866539 - L1MC4a LINE L1 -480 7328 7150 2180 93 0 38 chr2 245821315 245821644 -4866210 - AluY SINE Alu 0 318 1 2030 186 65 95 chr2 245821644 245822047 -4865807 - L1MC4a LINE L1 -658 7150 6821 2592 71 0 0 chr2 245822190 245822501 -4865353 - AluY SINE Alu 0 311 1 1719 173 0 50 chr2 245822522 245822840 -4865014 - AluJb SINE Alu -9 303 2 21 36 0 0 chr2 245822840 245822868 -4864986 + AT_rich Low_complexity Low_complexity 1 28 0 215 305 0 0 chr2 245822955 245823014 -4864840 + L2 LINE L2 3197 3255 -17 420 266 16 31 chr2 245823124 245823252 -4864602 - MER5A DNA MER1_type -53 136 11 * 510 291 128 20 chr2 245823234 245823437 -4864417 + MIR SINE MIR 17 241 -21 222 295 22 86 chr2 245824173 245824312 -4863542 - MIR SINE MIR -119 143 14 231 299 234 33 chr2 245824888 245825132 -4862722 - L2 LINE L2 -55 3258 2966 469 281 96 27 chr2 245825309 245825518 -4862336 + MIR SINE MIR 30 251 -11 2128 131 6 10 chr2 245826348 245826661 -4861193 - AluSx SINE Alu 0 312 1 1726 176 3 0 chr2 245826759 245827049 -4860805 + AluJo SINE Alu 1 291 -21 411 211 184 0 chr2 245827061 245827175 -4860679 + FLAM_A SINE Alu 1 135 -7 200 161 0 0 chr2 245827224 245827255 -4860599 - L2 LINE L2 -16 3297 3267 224 340 146 35 chr2 245828997 245829141 -4858713 + MIR SINE MIR 38 197 -65 457 359 136 26 chr2 245829789 245830327 -4857527 - L3 LINE CR1 -245 1332 736 1708 194 36 64 chr2 245830332 245830504 -4857350 + MLT1C LTR MaLR 11 186 -281 2365 89 0 7 chr2 245830504 245830808 -4857046 + AluSg1 SINE Alu 1 302 -7 1708 194 36 64 chr2 245830808 245831105 -4856749 + MLT1C LTR MaLR 186 467 0 190 333 0 0 chr2 245831105 245831159 -4856695 - L3 LINE CR1 -837 740 687 381 254 8 39 chr2 245831825 245831955 -4855899 - MER103 DNA DNA -7 159 34 3307 177 34 13 chr2 245833001 245833673 -4854181 + L1MB8 LINE L1 5484 6169 -9 225 65 0 0 chr2 245834800 245834831 -4853023 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 900 199 8 13 chr2 245835064 245835598 -4852256 + (TGGA)n Simple_repeat Simple_repeat 1 531 0 478 317 88 10 chr2 245835681 245835886 -4851968 + MIR SINE MIR 24 244 -18 836 208 251 44 chr2 245836161 245836392 -4851462 - L2 LINE L2 -1 3312 3130 273 29 0 0 chr2 245836392 245836426 -4851428 + (TG)n Simple_repeat Simple_repeat 2 35 0 836 208 251 44 chr2 245836426 245836702 -4851152 - L2 LINE L2 -183 3130 2704 368 345 161 3 chr2 245837438 245837742 -4850112 - L1M4 LINE L1 -3584 2562 2211 2182 86 24 14 chr2 245838074 245838365 -4849489 - AluY SINE Alu -17 294 1 511 75 15 0 chr2 245889241 245889308 -4798546 + MER51A LTR ERV1 567 634 0 536 303 35 0 chr2 245889421 245889566 -4798288 - MER91A DNA MER1_type -46 150 1 1383 211 85 3 chr2 245889891 245890209 -4797645 + MER2 DNA MER2_type 1 344 0 1069 208 10 0 chr2 245890216 245890413 -4797441 + MER82 DNA MER2_type 6 204 -449 22 35 0 0 chr2 245890415 245890444 -4797410 + AT_rich Low_complexity Low_complexity 1 29 0 903 281 107 35 chr2 245890672 245891103 -4796751 + MER82 DNA MER2_type 171 632 -21 202 320 13 26 chr2 245892622 245892700 -4795154 + MIR SINE MIR 73 149 -113 2602 14 0 0 chr2 245894579 245894875 -4792979 + AluY SINE Alu 1 296 -15 908 59 8 0 chr2 245895110 245895229 -4792625 - THE1A-int LTR MaLR -1460 120 1 1546 119 55 11 chr2 245895229 245895526 -4792328 - THE1A LTR MaLR 0 355 1 629 180 0 16 chr2 245895526 245895641 -4792213 + MLT2B2 LTR ERVL 403 515 0 373 341 32 0 chr2 245896078 245896204 -4791650 - MIR SINE MIR -8 254 125 500 307 104 22 chr2 245896215 245896446 -4791408 - MIR SINE MIR -10 252 3 1011 109 17 6 chr2 245898034 245898208 -4789646 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 432 158 0 0 chr2 245898209 245898285 -4789569 + CT-rich Low_complexity Low_complexity 3 78 0 297 151 0 0 chr2 245898446 245898499 -4789355 + (TG)n Simple_repeat Simple_repeat 2 54 0 370 277 51 22 chr2 245901975 245902112 -4785742 - MIR SINE MIR -26 236 96 520 290 61 22 chr2 245902155 245902386 -4785468 - Charlie8 DNA MER1_type -2138 279 40 526 235 74 27 chr2 245902438 245902587 -4785267 + L1MA9 LINE L1 6117 6272 -40 256 280 36 66 chr2 245905055 245905176 -4782678 + MIR SINE MIR 36 151 -65 382 128 0 115 chr2 245905176 245905254 -4782600 + Tigger2 DNA MER2_type 1 69 -2649 * 2398 151 64 2 chr2 245905238 245905661 -4782193 + Tigger2 DNA MER2_type 2267 2715 -3 187 333 56 14 chr2 245905667 245905739 -4782115 + MIR SINE MIR 156 230 -32 244 265 57 56 chr2 245907056 245907243 -4780611 + L1MDa LINE L1 1056 1271 -5111 2293 88 0 0 chr2 245907247 245907541 -4780313 - AluSg SINE Alu -14 296 3 1606 206 14 57 chr2 245907553 245907990 -4779864 - L1ME2 LINE L1 0 6164 5747 432 258 25 0 chr2 245908561 245908681 -4779173 - MER103 DNA DNA -1 165 43 207 0 0 0 chr2 245908714 245908737 -4779117 + (CA)n Simple_repeat Simple_repeat 1 23 0 905 265 27 18 chr2 245908770 245909106 -4778748 - L1ME4a LINE L1 -208 5913 5575 260 184 0 0 chr2 245909138 245909187 -4778667 - L1MC4 LINE L1 -2 8040 7992 2890 244 158 19 chr2 245909194 245909804 -4778050 - L1MC4 LINE L1 -142 7900 7376 1566 172 3 14 chr2 245909804 245910101 -4777753 - AluJo SINE Alu -16 296 3 2890 244 158 19 chr2 245910101 245910633 -4777221 - L1MC4 LINE L1 -666 7376 6499 1035 124 0 0 chr2 245910887 245911037 -4776817 + (GGAA)n Simple_repeat Simple_repeat 1 327 0 1035 124 0 0 chr2 245911037 245911214 -4776640 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 534 316 60 0 chr2 245911719 245911988 -4775866 - L1MEc LINE L1 -5354 1042 758 839 154 0 7 chr2 245912005 245912154 -4775700 + AluSg/x SINE Alu 156 303 -9 1650 174 10 10 chr2 245912165 245912463 -4775391 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr2 245912463 245912487 -4775367 + (TA)n Simple_repeat Simple_repeat 2 25 0 727 316 67 50 chr2 245912575 245913161 -4774693 - L1MEc LINE L1 -5758 638 43 396 214 60 8 chr2 245913486 245913603 -4774251 - MER103 DNA DNA -5 161 39 194 191 48 0 chr2 245914933 245914975 -4772879 + L2 LINE L2 3266 3309 -4 462 39 77 51 chr2 245915853 245915931 -4771923 + MADE1 DNA Mariner 1 80 0 447 282 48 0 chr2 245916259 245916383 -4771471 - L1ME4a LINE L1 -14 6107 5978 494 320 10 5 chr2 245916390 245916593 -4771261 - L1ME4a LINE L1 -257 5864 5661 314 321 37 0 chr2 245917085 245917194 -4770660 - L2 LINE L2 -35 3278 3166 247 200 146 27 chr2 245917427 245917537 -4770317 - L2 LINE L2 -460 2854 2732 21 36 0 0 chr2 245918934 245918962 -4768892 + AT_rich Low_complexity Low_complexity 1 28 0 281 310 17 60 chr2 245920892 245921008 -4766846 + MIR3 SINE MIR 67 177 -31 184 315 0 19 chr2 245922347 245922401 -4765453 - L3 LINE CR1 -2 1575 1523 388 310 113 49 chr2 245922945 245923271 -4764583 - L2 LINE L2 -2 3270 2924 231 366 19 33 chr2 245923546 245924030 -4763824 - TAR1 Satellite telomeric -572 1539 1063 1043 218 9 23 chr2 245924412 245924628 -4763226 - MLT1A1 LTR MaLR -1 364 152 34 24 0 0 chr2 245924811 245924852 -4763002 + AT_rich Low_complexity Low_complexity 1 41 0 288 375 18 4 chr2 245924854 245925083 -4762771 + L1M4 LINE L1 3802 4033 -2113 1966 227 15 7 chr2 245925232 245925686 -4762168 - L1ME1 LINE L1 -142 6024 5567 253 261 143 75 chr2 245925782 245925943 -4761911 - MER5B DNA MER1_type -5 173 2 849 127 57 19 chr2 245930402 245930559 -4757295 - L1MB3 LINE L1 -2 6181 6019 1787 191 49 20 chr2 245930763 245931358 -4756496 - L1MB3 LINE L1 -392 5782 5151 3204 196 49 21 chr2 245934533 245935248 -4752606 + L1MA9 LINE L1 5575 6309 -3 2034 125 10 7 chr2 245935266 245935570 -4752284 - AluSx SINE Alu -3 309 5 649 242 124 11 chr2 245936659 245936932 -4750922 - MLT1C LTR MaLR 0 467 164 1662 79 0 13 chr2 245937411 245937639 -4750215 - AluSp SINE Alu -3 310 86 330 264 88 14 chr2 245938675 245938823 -4749031 - L1ME4a LINE L1 -4 6117 5959 438 271 116 30 chr2 245938975 245939174 -4748680 + MIR SINE MIR 34 249 -13 421 229 78 36 chr2 245939221 245939413 -4748441 - L1ME4a LINE L1 -213 5908 5709 189 0 0 0 chr2 245939558 245939579 -4748275 + (T)n Simple_repeat Simple_repeat 1 21 0 210 37 0 0 chr2 245940884 245940911 -4746943 + (T)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr2 245942174 245942195 -4745659 + AT_rich Low_complexity Low_complexity 1 21 0 3896 160 35 36 chr2 245942196 245942593 -4745261 - L1MB3 LINE L1 -4 6179 5783 186 43 0 0 chr2 245942593 245942616 -4745238 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2172 61 11 0 chr2 245942616 245942896 -4744958 - AluY SINE Alu -28 283 1 3896 160 35 36 chr2 245942896 245943280 -4744574 - L1MB3 LINE L1 -398 5785 5398 2191 161 34 46 chr2 245943280 245943852 -4744002 - MLT2A2 LTR ERVL 0 554 1 1279 171 76 8 chr2 245943852 245944116 -4743738 - L1MB3 LINE L1 -744 5402 5121 1367 89 51 76 chr2 245944614 245944674 -4743180 + MER30 DNA MER1_type 1 61 -169 1919 141 0 13 chr2 245944674 245944978 -4742876 + AluSx SINE Alu 1 300 -12 1367 89 51 76 chr2 245944978 245945153 -4742701 + MER30 DNA MER1_type 61 230 0 346 293 239 28 chr2 245947609 245948002 -4739852 + L2 LINE L2 2828 3303 -10 376 174 0 14 chr2 245948003 245948072 -4739782 - MLT1D LTR MaLR 0 626 559 2195 75 0 0 chr2 245948072 245948394 -4739460 + AluY SINE Alu 1 322 0 1433 178 97 52 chr2 245948433 245948782 -4739072 - MLT1D LTR MaLR -140 365 1 2402 197 81 17 chr2 245948803 245949336 -4738518 + MLT1F1 LTR MaLR 1 567 0 1065 217 68 80 chr2 245949936 245950350 -4737504 - MLT1I LTR MaLR 0 409 1 262 192 14 41 chr2 245950408 245950481 -4737373 - LTR67 LTR ERVL -3 554 484 * 1046 275 105 52 chr2 245950420 245950961 -4736893 - MLT1K LTR MaLR -15 573 4 2162 127 9 6 chr2 245951248 245951579 -4736275 + THE1A LTR MaLR 1 332 -23 549 333 118 30 chr2 245951878 245952284 -4735570 + L3 LINE CR1 220 661 -916 359 261 64 51 chr2 245952372 245952529 -4735325 - MIR SINE MIR -8 254 96 252 0 0 0 chr2 245952783 245952811 -4735043 + (TG)n Simple_repeat Simple_repeat 1 28 0 184 322 67 54 chr2 245953607 245953676 -4734178 - MIR SINE MIR -33 229 162 1870 160 95 47 chr2 245953676 245954119 -4733735 + MLT1C LTR MaLR 2 465 -2 184 322 67 54 chr2 245954119 245954198 -4733656 - MIR SINE MIR -100 162 79 2227 96 0 7 chr2 245955862 245956165 -4731689 + AluSq SINE Alu 1 301 -12 2015 169 29 3 chr2 245956471 245956821 -4731033 - MLT1A1 LTR MaLR -1 364 6 187 335 89 51 chr2 245960028 245960264 -4727590 - L3 LINE CR1 -1074 503 259 978 91 23 11 chr2 245960438 245960614 -4727240 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 220 169 62 0 chr2 245960608 245960673 -4727181 + CT-rich Low_complexity Low_complexity 3 71 0 182 305 188 8 chr2 245961021 245961149 -4726705 - MIR3 SINE MIR -3 205 55 515 271 118 31 chr2 245962327 245962648 -4725206 - LTR16A LTR ERVL -7 443 95 217 240 0 20 chr2 245964316 245964366 -4723488 + (TG)n Simple_repeat Simple_repeat 2 50 0 1519 186 63 88 chr2 245964441 245964553 -4723301 - MLT1C LTR MaLR 0 467 354 2115 94 4 0 chr2 245964553 245964819 -4723035 + AluSq SINE Alu 1 267 -46 1519 186 63 88 chr2 245964819 245965185 -4722669 - MLT1C LTR MaLR -113 354 1 821 145 97 0 chr2 245965983 245966128 -4721726 - MLT1B LTR MaLR 0 390 232 2210 123 0 3 chr2 245966171 245966480 -4721374 - AluSx SINE Alu -4 308 1 598 170 0 9 chr2 245966483 245966589 -4721265 - MLT1B LTR MaLR -285 105 1 484 235 93 83 chr2 245966660 245966962 -4720892 - MLT1I LTR MaLR -8 401 97 188 395 70 12 chr2 245967212 245967298 -4720556 - L2 LINE L2 -44 3228 3138 307 138 0 0 chr2 245968009 245968067 -4719787 - Alu SINE Alu 0 301 244 393 296 16 8 chr2 245968180 245968305 -4719549 - L1ME LINE L1 -448 5673 5548 311 326 11 0 chr2 245968327 245968416 -4719438 - L1ME LINE L1 -727 5451 5362 336 24 0 0 chr2 245968483 245968524 -4719330 + (GA)n Simple_repeat Simple_repeat 2 42 0 2204 94 4 0 chr2 245968525 245968801 -4719053 - AluSx SINE Alu -35 277 1 21 36 0 0 chr2 245968903 245968931 -4718923 + AT_rich Low_complexity Low_complexity 1 28 0 2158 108 25 0 chr2 245969812 245970098 -4717756 + AluSc SINE Alu 1 293 -16 2364 167 44 33 chr2 245972064 245972519 -4715335 + LOR1b LTR ERV1 2 461 0 2292 112 3 0 chr2 245972694 245972997 -4714857 + AluSx SINE Alu 6 309 -3 23 0 0 0 chr2 245973137 245973160 -4714694 + AT_rich Low_complexity Low_complexity 1 23 0 1033 156 53 74 chr2 245973333 245973576 -4714278 + MER51A LTR ERV1 1 238 -396 393 299 27 27 chr2 245975458 245975605 -4712249 + L2 LINE L2 3167 3313 0 251 224 30 30 chr2 245977211 245977278 -4710576 + CT-rich Low_complexity Low_complexity 1 67 0 2151 113 7 0 chr2 245977396 245977687 -4710167 + AluSg SINE Alu 1 293 -17 1943 71 0 17 chr2 245979864 245980104 -4707750 + AluY SINE Alu 1 236 -75 269 284 55 9 chr2 245980997 245981106 -4706748 - MIR SINE MIR -56 152 39 284 366 104 13 chr2 245981139 245981532 -4706322 - L2 LINE L2 -1141 2173 1745 2006 210 57 28 chr2 245981673 245982178 -4705676 + MLT1F LTR MaLR 8 527 -15 264 281 12 108 chr2 245982181 245982348 -4705506 - L2 LINE L2 -1841 1473 1323 2366 113 0 0 chr2 245982689 245982998 -4704856 - AluSg SINE Alu -1 309 1 190 306 134 30 chr2 245983189 245983323 -4704531 - L2 LINE L2 -2 3270 3123 182 356 22 22 chr2 245985148 245985238 -4702616 + L2 LINE L2 1934 2023 -1291 1940 251 70 32 chr2 245986379 245987025 -4700829 - MER21B LTR ERV1 -51 812 143 670 187 16 8 chr2 245987112 245987235 -4700619 - FLAM_A SINE Alu -9 124 1 330 228 11 43 chr2 245987262 245987354 -4700500 - MER21B LTR ERV1 -774 89 1 279 191 71 0 chr2 245987397 245987481 -4700373 + MER112 DNA MER1_type 71 160 -100 406 239 0 69 chr2 245988051 245988181 -4699673 + MER21B LTR ERV1 1 121 -742 582 253 62 78 chr2 245988195 245988452 -4699402 + MER21B LTR ERV1 100 352 -511 955 228 60 59 chr2 245988560 245988902 -4698952 + MER21B LTR ERV1 390 711 -4 360 248 50 0 chr2 245988977 245989078 -4698776 + MER21B LTR ERV1 650 755 -108 248 285 160 21 chr2 245989080 245989224 -4698630 + MER5A DNA MER1_type 26 189 0 353 345 97 36 chr2 245989348 245989404 -4698450 - L1ME4a LINE L1 -207 5914 5863 2377 84 0 7 chr2 245989404 245989701 -4698153 - AluSg1 SINE Alu -14 295 1 353 345 97 36 chr2 245989701 245989922 -4697932 - L1ME4a LINE L1 -258 5863 5620 403 333 81 15 chr2 245989958 245990156 -4697698 - L1ME4a LINE L1 -2265 5543 5333 186 304 76 11 chr2 245992038 245992130 -4695724 - L2 LINE L2 -1 3271 3174 398 253 71 0 chr2 245992734 245992833 -4695021 + MIR3 SINE MIR 84 189 -19 205 239 0 30 chr2 245992864 245992931 -4694923 + (TTA)n Simple_repeat Simple_repeat 3 67 0 314 321 36 9 chr2 245993240 245993352 -4694502 + MIR3 SINE MIR 83 197 -11 185 220 0 119 chr2 245994385 245994444 -4693410 - L2 LINE L2 0 3272 3221 215 343 27 0 chr2 245994504 245994577 -4693277 + L2 LINE L2 3238 3312 -1 9613 127 9 34 chr2 245994882 245996487 -4691367 - THE1C-int LTR MaLR -11 1569 4 1638 187 52 35 chr2 245996490 245996859 -4690995 - THE1C LTR MaLR 0 375 1 377 234 47 9 chr2 245997332 245997439 -4690415 - MLT1J1 LTR MaLR -335 111 1 346 211 56 11 chr2 245997656 245997746 -4690108 + MIR SINE MIR 73 166 -96 2093 111 72 28 chr2 245997941 245998300 -4689554 + THE1C LTR MaLR 1 375 0 204 436 32 13 chr2 245998310 245998466 -4689388 + L3 LINE CR1 222 380 -1197 2179 115 18 0 chr2 245998639 245998798 -4689056 - AluSx SINE Alu -21 291 123 459 0 0 0 chr2 245998798 245998849 -4689005 + (TG)n Simple_repeat Simple_repeat 2 52 0 2179 115 18 0 chr2 245998849 245998975 -4688879 - AluSx SINE Alu -189 123 1 369 298 13 7 chr2 245999167 245999318 -4688536 - L1ME LINE L1 -464 5657 5506 711 300 144 39 chr2 245999610 246000254 -4687600 - L1ME4a LINE L1 -29 6092 5319 352 267 38 19 chr2 246000707 246000812 -4687042 + L3 LINE CR1 1233 1339 -238 220 225 34 90 chr2 246000935 246001024 -4686830 + L3 LINE CR1 1494 1577 0 443 166 14 3 chr2 246003055 246003197 -4684657 - MER53 DNA DNA -2 187 2 2077 137 55 94 chr2 246005012 246005525 -4682329 - MER52C LTR ERV1 0 1278 786 1871 169 15 18 chr2 246005518 246005978 -4681876 - MER52C LTR ERV1 -736 542 1 * 2004 133 45 3 chr2 246005978 246006330 -4681524 - MLT1B LTR MaLR -23 367 1 2248 104 3 0 chr2 246006458 246006745 -4681109 + AluSq SINE Alu 1 288 -25 190 319 42 0 chr2 246006770 246006842 -4681012 + MIR SINE MIR 169 243 -19 206 364 59 0 chr2 246007099 246007217 -4680637 + L2 LINE L2 2937 3061 -252 901 217 42 72 chr2 246007275 246007607 -4680247 - MER74B LTR ERVL -7 615 294 504 150 0 0 chr2 246007667 246007747 -4680107 - MLT1B LTR MaLR -192 198 119 * 966 190 8 54 chr2 246007741 246007983 -4679871 - MER74B LTR ERVL -334 288 58 203 190 22 44 chr2 246008056 246008193 -4679661 + GA-rich Low_complexity Low_complexity 3 136 0 194 108 0 95 chr2 246008736 246008810 -4679044 + (AGGGGG)n Simple_repeat Simple_repeat 5 71 0 258 229 57 67 chr2 246009003 246009108 -4678746 + LTR33 LTR ERVL 416 519 -2 2359 104 3 0 chr2 246009935 246010243 -4677611 + AluSx SINE Alu 1 309 -3 247 277 98 55 chr2 246011084 246011358 -4676496 + LTR16C LTR ERVL 190 475 -16 315 337 136 12 chr2 246011614 246011783 -4676071 - L2 LINE L2 0 3272 3083 189 204 19 56 chr2 246011808 246011862 -4675992 + L2 LINE L2 3006 3057 -215 2321 132 13 21 chr2 246011960 246012338 -4675516 - THE1C LTR MaLR 0 375 1 281 294 123 32 chr2 246012937 246013124 -4674730 + L2 LINE L2 3020 3223 -49 647 273 51 6 chr2 246014823 246014999 -4672855 - MIR SINE MIR -56 206 23 1515 165 6 108 chr2 246015331 246015665 -4672189 - AluJo SINE Alu -2 300 1 2550 170 17 46 chr2 246016098 246016617 -4671237 - MLT1D LTR MaLR -1 504 1 216 86 0 0 chr2 246017513 246017548 -4670306 + (A)n Simple_repeat Simple_repeat 1 35 0 343 144 58 52 chr2 246017732 246017905 -4669949 + CT-rich Low_complexity Low_complexity 1 174 0 743 218 65 0 chr2 246018355 246018525 -4669329 - MER58A DNA MER1_type -37 187 7 217 291 55 18 chr2 246018979 246019089 -4668765 + L2 LINE L2 2641 2754 -560 2199 228 59 9 chr2 246019297 246019837 -4668017 - MLT1F1 LTR MaLR 0 567 1 233 263 75 25 chr2 246019873 246019953 -4667901 + MIR SINE MIR 87 170 -92 2061 115 7 0 chr2 246020260 246020555 -4667299 - AluSx SINE Alu -14 298 2 1443 102 49 36 chr2 246021037 246021262 -4666592 - MER30 DNA MER1_type 0 230 3 230 346 0 0 chr2 246022570 246022651 -4665203 + MER117 DNA MER1_type 106 186 -11 1716 192 104 0 chr2 246024728 246025082 -4662772 + MLT2B2 LTR ERVL 1 391 -124 2302 115 29 9 chr2 246025090 246025438 -4662416 - THE1A LTR MaLR 0 355 1 11035 98 3 0 chr2 246025438 246026862 -4660992 - THE1A-int LTR MaLR 0 1580 152 4356 235 67 48 chr2 246027342 246027753 -4660101 - L1MEc LINE L1 -1398 4817 4415 1427 149 36 32 chr2 246027753 246028034 -4659820 + AluJb SINE Alu 1 282 -30 4356 235 67 48 chr2 246028034 246029470 -4658384 - L1MEc LINE L1 -1800 4415 2934 1783 106 0 15 chr2 246029705 246029998 -4657856 - AluSq SINE Alu 0 313 33 690 13 0 0 chr2 246030020 246030099 -4657755 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 1396 241 74 53 chr2 246030099 246030510 -4657344 - L1MEc LINE L1 -3269 2946 2512 512 40 0 192 chr2 246030510 246030569 -4657285 - MADE1 DNA Mariner 0 80 46 1614 81 178 0 chr2 246030569 246030827 -4657027 + AluSx SINE Alu 1 304 -8 512 40 0 192 chr2 246030827 246030866 -4656988 - MADE1 DNA Mariner -34 46 1 1396 241 74 53 chr2 246030866 246031155 -4656699 - L1MEc LINE L1 -3703 2512 2231 956 226 14 10 chr2 246031158 246031366 -4656488 + MER3 DNA MER1_type 1 209 0 2182 284 106 19 chr2 246031366 246032763 -4655091 - L1MEc LINE L1 -4121 2275 758 839 154 0 7 chr2 246032780 246032929 -4654925 + AluSg/x SINE Alu 156 303 -9 1848 164 0 0 chr2 246032940 246033233 -4654621 + AluSx SINE Alu 1 293 -19 414 0 0 0 chr2 246033233 246033279 -4654575 + (TA)n Simple_repeat Simple_repeat 2 47 0 728 320 82 45 chr2 246033285 246033953 -4653901 - L1MEc LINE L1 -5661 735 43 396 214 60 8 chr2 246034278 246034395 -4653459 - MER103 DNA DNA -5 161 39 194 191 48 0 chr2 246035730 246035772 -4652082 + L2 LINE L2 3266 3309 -4 462 39 77 51 chr2 246036649 246036727 -4651127 + MADE1 DNA Mariner 1 80 0 462 274 48 0 chr2 246037054 246037178 -4650676 - L1ME4a LINE L1 -14 6107 5978 722 300 7 34 chr2 246037185 246037482 -4650372 - L1ME4a LINE L1 -257 5864 5576 314 321 37 0 chr2 246038709 246038818 -4649036 - L2 LINE L2 -35 3278 3166 264 211 147 18 chr2 246039051 246039160 -4648694 - L2 LINE L2 -460 2854 2732 21 0 0 0 chr2 246040168 246040189 -4647665 + AT_rich Low_complexity Low_complexity 1 21 0 219 69 0 0 chr2 246040927 246040956 -4646898 + (TG)n Simple_repeat Simple_repeat 2 30 0 2835 87 14 0 chr2 246041234 246041604 -4646250 + THE1C LTR MaLR 1 375 0 216 67 0 0 chr2 246041729 246041759 -4646095 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 327 349 0 0 chr2 246042252 246042378 -4645476 + L1 LINE L1 4031 4156 -1990 405 347 47 52 chr2 246042381 246042764 -4645090 + L1 LINE L1 4207 4587 -1559 927 310 121 46 chr2 246043298 246044015 -4643839 - HAL1b LINE L1 -186 1162 392 390 21 0 0 chr2 246044090 246044137 -4643717 + (CA)n Simple_repeat Simple_repeat 2 48 0 290 233 45 60 chr2 246044191 246044324 -4643530 - HAL1b LINE L1 -997 351 221 26 0 0 0 chr2 246044846 246044872 -4642982 + AT_rich Low_complexity Low_complexity 1 26 0 619 213 103 0 chr2 246044958 246045094 -4642760 + MER20 DNA MER1_type 70 219 0 227 279 13 13 chr2 246045409 246045488 -4642366 - MER116 DNA Mariner 0 80 2 193 336 123 27 chr2 246045488 246045708 -4642146 - MIR SINE MIR -15 247 7 667 294 129 34 chr2 246045726 246046348 -4641506 + HAL1b LINE L1 60 740 -608 302 299 81 47 chr2 246046755 246047076 -4640778 + L1ME3A LINE L1 3830 4161 -1985 636 303 100 77 chr2 246047085 246047649 -4640205 + L1ME3A LINE L1 4274 4851 -1295 247 270 0 16 chr2 246047676 246047739 -4640115 + L1M1 LINE L1 5477 5538 -764 263 296 146 17 chr2 246047764 246048004 -4639850 + L1ME3A LINE L1 5543 5813 -351 22 0 0 0 chr2 246048417 246048439 -4639415 + AT_rich Low_complexity Low_complexity 1 22 0 2583 39 0 0 chr2 246048448 246048759 -4639095 + AluY SINE Alu 1 311 0 649 316 76 19 chr2 246048761 246049299 -4638555 + L1ME4a LINE L1 5384 5952 -169 219 88 0 0 chr2 246049308 246049342 -4638512 + (GA)n Simple_repeat Simple_repeat 1 34 0 361 48 0 32 chr2 246049742 246049804 -4638050 + (TA)n Simple_repeat Simple_repeat 2 61 0 234 324 74 9 chr2 246050882 246050990 -4636864 + MLT1I LTR MaLR 3 117 -292 413 276 37 8 chr2 246051003 246051137 -4636717 + MLT1I LTR MaLR 236 373 -36 870 245 33 95 chr2 246051753 246052120 -4635734 + L1ME3A LINE L1 5788 6131 -39 190 361 33 33 chr2 246052427 246052549 -4635305 + MIR SINE MIR 19 140 -68 23 0 0 0 chr2 246053269 246053292 -4634562 + AT_rich Low_complexity Low_complexity 1 23 0 2952 163 54 9 chr2 246053432 246053925 -4633929 + L1MC1 LINE L1 5725 6246 -87 405 0 0 0 chr2 246053925 246053970 -4633884 + (TG)n Simple_repeat Simple_repeat 2 46 0 2952 163 54 9 chr2 246053970 246054017 -4633837 + L1MC1 LINE L1 6246 6289 -44 225 349 0 0 chr2 246054463 246054546 -4633308 + C-rich Low_complexity Low_complexity 4 86 0 257 336 62 8 chr2 246055342 246055470 -4632384 + MIR SINE MIR 12 146 -116 190 225 0 25 chr2 246055667 246055707 -4632147 + L2 LINE L2 3267 3305 -8 2122 123 0 3 chr2 246055892 246056202 -4631652 + AluSc SINE Alu 1 309 0 358 217 89 34 chr2 246056203 246056351 -4631503 + L1M4 LINE L1 1032 3200 -1302 2013 127 0 0 chr2 246057043 246057355 -4630499 + AluSx SINE Alu 3 314 0 2189 99 0 0 chr2 246057987 246058281 -4629573 + AluSx SINE Alu 1 294 -18 204 135 0 0 chr2 246058567 246058604 -4629250 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 612 73 0 0 chr2 246060986 246061068 -4626786 + (TA)n Simple_repeat Simple_repeat 1 82 0 213 367 0 0 chr2 246061525 246061623 -4626231 + G-rich Low_complexity Low_complexity 1 98 0 447 210 3 32 chr2 246062630 246062755 -4625099 - L1MCa LINE L1 -1339 6983 1995 330 344 0 0 chr2 246062757 246062847 -4625007 + L1MC4 LINE L1 6614 6703 -1339 * 434 267 0 0 chr2 246062833 246062923 -4624931 - L1MC4 LINE L1 -1339 6703 6614 1983 148 0 16 chr2 246063623 246063940 -4623914 + AluSx SINE Alu 1 312 0 387 0 0 0 chr2 246064371 246064414 -4623440 + (TG)n Simple_repeat Simple_repeat 1 43 0 517 220 72 80 chr2 246065179 246065573 -4622281 + MER113 DNA MER1_type? 63 476 -45 386 258 38 45 chr2 246065654 246065786 -4622068 - MIR SINE MIR -63 199 69 614 282 131 43 chr2 246065788 246066231 -4621623 - LTR33A LTR ERVL -6 517 36 759 154 0 8 chr2 246067820 246067943 -4619911 + MLT1B LTR MaLR 268 389 -1 21 57 0 0 chr2 246068561 246068596 -4619258 + AT_rich Low_complexity Low_complexity 1 35 0 5407 179 3 14 chr2 246069017 246070041 -4617813 + L1P LINE L1 3922 4934 -1212 1490 105 39 18 chr2 246070168 246070454 -4617400 + MER61-int LTR ERV1 2224 5099 -118 * 2311 153 80 45 chr2 246070453 246071238 -4616616 + pTR5 LTR ERV1 742 1604 -834 327 359 50 17 chr2 246072920 246073101 -4614753 - L1MC4 LINE L1 -547 7495 7309 395 283 58 39 chr2 246073113 246073318 -4614536 - L1MC5 LINE L1 -736 7225 7017 876 88 27 14 chr2 246074341 246074489 -4613365 + (GAAA)n Simple_repeat Simple_repeat 4 153 0 22 0 0 0 chr2 246075140 246075162 -4612692 + AT_rich Low_complexity Low_complexity 1 22 0 354 281 56 51 chr2 246075964 246076160 -4611694 + MLT1K LTR MaLR 326 522 -66 275 132 0 41 chr2 246076348 246076402 -4611452 - MLT1H LTR MaLR 0 549 504 241 267 109 30 chr2 246076482 246076583 -4611271 - MLT1H LTR MaLR -399 150 42 1911 265 85 72 chr2 246076749 246078283 -4609571 - L2 LINE L2 0 3313 1764 343 266 109 31 chr2 246079697 246079825 -4608029 - MIR SINE MIR -48 214 77 1976 144 0 0 chr2 246080628 246080926 -4606928 - AluSx SINE Alu -14 298 1 211 288 116 88 chr2 246081091 246081306 -4606548 + L2 LINE L2 3033 3253 -19 1018 172 31 48 chr2 246081645 246081872 -4605982 + L1MA10 LINE L1 6105 6327 -7 673 300 59 13 chr2 246083498 246083735 -4604119 - MIR SINE MIR -12 250 3 420 258 227 7 chr2 246084033 246084388 -4603466 + L2 LINE L2 2683 3110 -203 296 211 46 92 chr2 246084810 246084919 -4602935 + L2 LINE L2 3148 3251 -62 203 156 0 0 chr2 246086557 246086589 -4601265 + (TG)n Simple_repeat Simple_repeat 2 33 0 198 0 0 0 chr2 246087046 246087068 -4600786 + (T)n Simple_repeat Simple_repeat 1 22 0 245 133 0 22 chr2 246087345 246087390 -4600464 - MSTC LTR MaLR -384 44 1 1926 141 0 0 chr2 246087505 246087796 -4600058 + AluSx SINE Alu 1 291 -21 214 346 0 0 chr2 246088548 246088675 -4599179 + T-rich Low_complexity Low_complexity 1 127 0 2141 114 0 0 chr2 246088977 246089287 -4598567 + AluSx SINE Alu 1 310 0 300 311 242 8 chr2 246089445 246089577 -4598277 - MIR SINE MIR -72 190 28 626 274 57 74 chr2 246091341 246091647 -4596207 + LTR37B LTR ERV1 1 298 -170 3435 151 23 81 chr2 246091647 246092380 -4595474 - LTR8 LTR ERV1 0 691 1 626 274 57 74 chr2 246092380 246092547 -4595307 + LTR37B LTR ERV1 298 466 -2 4365 142 46 16 chr2 246093768 246094529 -4593325 - LTR1 LTR ERV1 0 785 2 2042 97 11 0 chr2 246094529 246094880 -4592974 - AluSx SINE Alu 0 354 1 291 71 0 0 chr2 246095085 246095127 -4592727 + (TC)n Simple_repeat Simple_repeat 1 42 0 430 310 75 6 chr2 246095137 246095311 -4592543 + MIR SINE MIR 5 190 -72 227 227 0 0 chr2 246095552 246095596 -4592258 + L2 LINE L2 3217 3260 -12 1816 144 0 0 chr2 246096150 246096456 -4591398 + AluSx SINE Alu 1 306 0 183 80 0 0 chr2 246097388 246097413 -4590441 + (TCCC)n Simple_repeat Simple_repeat 2 26 0 426 284 54 130 chr2 246098468 246098585 -4589269 - MIR SINE MIR 0 262 138 925 95 7 7 chr2 246098585 246098733 -4589121 + (TTTC)n Simple_repeat Simple_repeat 4 151 0 1764 104 40 0 chr2 246098735 246098986 -4588868 - AluSq SINE Alu -50 263 3 426 284 54 130 chr2 246098986 246099126 -4588728 - MIR SINE MIR -125 137 22 1829 138 14 3 chr2 246099126 246099416 -4588438 - AluJo SINE Alu -11 301 9 251 269 269 6 chr2 246100430 246100586 -4587268 - MIR SINE MIR 0 262 66 282 306 81 38 chr2 246100655 246100815 -4587039 - MIR SINE MIR -76 186 20 1135 277 35 62 chr2 246101254 246102354 -4585500 - L1MCc LINE L1 -4598 2524 1293 451 240 38 118 chr2 246102986 246103225 -4584629 + MER41B LTR ERV1 57 430 -205 22 0 0 0 chr2 246103483 246103505 -4584349 + AT_rich Low_complexity Low_complexity 1 22 0 383 273 11 0 chr2 246103570 246103658 -4584196 - MER117 DNA MER1_type -107 90 2 1866 142 0 43 chr2 246103860 246104184 -4583670 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr2 246104210 246104238 -4583616 + AT_rich Low_complexity Low_complexity 1 28 0 439 295 104 31 chr2 246104283 246104476 -4583378 + MIR SINE MIR 56 262 0 6157 58 7 0 chr2 246104611 246105365 -4582489 + L1PA7 LINE L1 5393 6151 -3 266 226 137 24 chr2 246105550 246105674 -4582180 - L1ME LINE L1 -338 5783 5646 189 107 0 0 chr2 246108439 246108467 -4579387 + (A)n Simple_repeat Simple_repeat 1 28 0 308 355 50 21 chr2 246109389 246109530 -4578324 - L2 LINE L2 -3 3269 3125 294 350 35 0 chr2 246109550 246109693 -4578161 - L2 LINE L2 -842 2472 2325 182 284 155 34 chr2 246109702 246109850 -4578004 - L2 LINE L2 -19 3253 3088 2066 125 0 3 chr2 246112115 246112410 -4575444 - AluSx SINE Alu -18 294 1 392 241 0 13 chr2 246112434 246112513 -4575341 - L2 LINE L2 0 3272 3195 206 136 23 0 chr2 246112639 246112683 -4575171 + (TG)n Simple_repeat Simple_repeat 1 45 0 892 195 14 36 chr2 246112972 246113193 -4574661 - L1MC3 LINE L1 0 7785 7570 * 3262 201 52 3 chr2 246113163 246113840 -4574014 - L1MC3 LINE L1 -924 6861 6152 253 303 217 0 chr2 246113865 246114017 -4573837 - L2 LINE L2 -623 2691 2507 246 313 90 8 chr2 246115394 246115528 -4572326 + L2 LINE L2 2952 3096 -176 188 268 14 0 chr2 246115925 246115996 -4571858 + (TATG)n Simple_repeat Simple_repeat 2 73 0 1619 122 0 8 chr2 246116596 246116834 -4571020 + AluSx SINE Alu 39 274 -38 334 310 5 0 chr2 246117492 246117683 -4570171 + (TG)n Simple_repeat Simple_repeat 1 192 0 299 264 181 21 chr2 246117713 246117857 -4569997 - MIR SINE MIR -26 236 70 312 252 30 53 chr2 246120871 246121002 -4566852 - LTR67 LTR ERVL -4 553 426 356 294 106 12 chr2 246121129 246121289 -4566565 - MLT1K LTR MaLR -411 177 3 319 300 55 0 chr2 246121734 246121844 -4566010 + MIR SINE MIR 31 146 -62 1990 170 9 42 chr2 246122633 246122779 -4565075 + L1MB3 LINE L1 5688 5837 -346 2073 113 0 0 chr2 246122779 246123062 -4564792 + AluSx SINE Alu 1 283 -29 1990 170 9 42 chr2 246123062 246123429 -4564425 + L1MB3 LINE L1 5837 6147 -36 538 286 118 49 chr2 246124587 246124992 -4562862 + L1ME LINE L1 5267 5699 -422 937 152 0 0 chr2 246125005 246125156 -4562698 - AluSp/q SINE Alu 0 313 163 235 222 170 15 chr2 246125171 246125306 -4562548 + L1ME LINE L1 5726 5881 -240 390 318 189 15 chr2 246125410 246125743 -4562111 + L1ME2 LINE L1 4910 5300 -846 482 228 4 63 chr2 246125744 246125834 -4562020 + L1ME2 LINE L1 5340 5434 -744 2223 105 60 26 chr2 246125834 246126186 -4561668 + THE1B LTR MaLR 1 364 0 482 228 4 63 chr2 246126186 246126310 -4561544 + L1ME2 LINE L1 5434 5610 -568 1154 125 16 42 chr2 246126349 246126541 -4561313 + THE1B LTR MaLR 116 302 -62 2749 128 11 11 chr2 246126617 246127076 -4560778 + MER1A DNA MER1_type 31 529 0 293 295 115 66 chr2 246127149 246127393 -4560461 + L1ME2 LINE L1 5909 6164 0 1185 175 5 0 chr2 246127881 246128092 -4559762 + AluJb SINE Alu 85 296 -16 194 340 113 31 chr2 246128922 246129019 -4558835 - L2 LINE L2 -9 3263 3159 4532 127 21 8 chr2 246129302 246130004 -4557850 + MER50 LTR ERV1 1 711 -23 509 290 117 26 chr2 246132090 246132321 -4555533 - L1M4 LINE L1 -3059 3087 2836 227 254 0 0 chr2 246132360 246132415 -4555439 + (CCCTAA)n Simple_repeat Simple_repeat 3 57 0 21 0 0 0 chr2 246133250 246133271 -4554583 + AT_rich Low_complexity Low_complexity 1 21 0 627 142 213 85 chr2 246133370 246133520 -4554334 - MER33 DNA MER1_type -2273 312 183 1684 163 17 7 chr2 246133520 246133814 -4554040 - AluJb SINE Alu -15 297 1 627 142 213 85 chr2 246133814 246133944 -4553910 - MER33 DNA MER1_type -2402 183 1 1507 179 105 14 chr2 246134702 246135054 -4552800 + MLT1B LTR MaLR 1 384 -6 632 195 47 58 chr2 246135289 246135479 -4552375 - MER53 DNA DNA 0 189 2 444 296 104 16 chr2 246135613 246135863 -4551991 + L1M4 LINE L1 5107 5378 -768 2147 101 7 0 chr2 246136607 246136904 -4550950 - AluSg SINE Alu -11 299 1 2404 140 18 5 chr2 246137327 246137712 -4550142 - MLT1B LTR MaLR 0 390 1 27 0 0 0 chr2 246137766 246137793 -4550061 + AT_rich Low_complexity Low_complexity 1 27 0 817 191 0 0 chr2 246139575 246139727 -4548127 + L1MD2 LINE L1 6208 6359 0 306 0 0 0 chr2 246140267 246140301 -4547553 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 4204 80 7 4 chr2 246141310 246141861 -4545993 - MER41A LTR ERV1 0 554 2 755 153 85 40 chr2 246142203 246142380 -4545474 + MER5A DNA MER1_type 3 187 -2 685 195 59 35 chr2 246144870 246145039 -4542815 - MER5A DNA MER1_type -16 173 1 566 231 163 6 chr2 246145048 246145208 -4542646 + MER5A DNA MER1_type 4 188 -1 220 260 123 0 chr2 246145208 246145279 -4542575 + L2 LINE L2 3185 3264 -49 1641 112 4 0 chr2 246147977 246148209 -4539645 + MER72 LTR ERV1 489 721 -1 3286 133 66 101 chr2 246148299 246148992 -4538862 + LTR8A LTR ERV1 1 667 -60 4280 119 25 6 chr2 246148992 246149624 -4538230 + LTR9B LTR ERV1 1 644 0 3286 133 66 101 chr2 246149624 246149683 -4538171 + LTR8A LTR ERV1 667 727 0 867 154 30 18 chr2 246150426 246150595 -4537259 - L1MA2 LINE L1 0 6304 6134 386 288 24 16 chr2 246151249 246151374 -4536480 + MIR SINE MIR 19 144 -64 508 298 56 0 chr2 246152361 246152522 -4535332 + MLT1H1 LTR MaLR 2 171 -424 528 239 72 72 chr2 246152544 246152721 -4535133 + MLT1H1 LTR MaLR 339 518 -37 2050 99 13 7 chr2 246152721 246153024 -4534830 - AluSp SINE Alu -8 305 1 528 239 72 72 chr2 246153024 246153055 -4534799 + MLT1H1 LTR MaLR 517 547 -8 281 98 0 0 chr2 246153076 246153117 -4534737 + MER57A LTR ERV1 1 41 -362 368 62 0 0 chr2 246153124 246153172 -4534682 - MADE1 DNA Mariner -2 78 31 2177 142 8 45 chr2 246153179 246153518 -4534336 + MER57A LTR ERV1 37 363 -40 1668 151 3 3 chr2 246153518 246153825 -4534029 + AluSq SINE Alu 1 307 0 2177 142 8 45 chr2 246153825 246153865 -4533989 + MER57A LTR ERV1 363 403 0 335 290 29 115 chr2 246154346 246154625 -4533229 - MLT1J LTR MaLR -143 368 114 229 179 45 0 chr2 246154869 246154936 -4532918 + (CA)n Simple_repeat Simple_repeat 1 70 0 186 349 16 16 chr2 246155941 246156004 -4531850 - L2 LINE L2 -73 3199 3137 227 271 0 83 chr2 246157109 246157205 -4530649 + MIR SINE MIR 109 196 -66 489 238 71 64 chr2 246157548 246157767 -4530087 - MLT1G1 LTR MaLR -282 260 42 2048 130 31 31 chr2 246157868 246158192 -4529662 + THE1B LTR MaLR 41 364 0 2442 261 75 14 chr2 246158193 246158966 -4528888 - L1ME3A LINE L1 -92 6078 5259 180 302 0 0 chr2 246159095 246159138 -4528716 + L2 LINE L2 2589 2631 -683 553 306 86 5 chr2 246159319 246159530 -4528324 + MIR SINE MIR 36 261 -1 369 318 116 6 chr2 246159890 246160062 -4527792 - MIR SINE MIR -57 151 11 21 0 0 0 chr2 246160848 246160869 -4526985 + AT_rich Low_complexity Low_complexity 1 21 0 294 270 183 0 chr2 246162322 246162459 -4525395 + MIR3 SINE MIR 41 202 -6 188 314 105 19 chr2 246163815 246163920 -4523934 + L2 LINE L2 415 528 -2786 2157 77 0 8 chr2 246164180 246164463 -4523391 + AluSx SINE Alu 1 281 -31 217 0 0 0 chr2 246164463 246164487 -4523367 + (CAA)n Simple_repeat Simple_repeat 1 180 0 206 337 154 37 chr2 246164511 246164861 -4522993 + L3 LINE CR1 1185 1575 -2 231 256 26 13 chr2 246165573 246165651 -4522203 + L2 LINE L2 2512 2590 -724 2515 111 16 5 chr2 246165745 246166114 -4521740 + THE1C LTR MaLR 1 373 -2 836 277 130 15 chr2 246166251 246166898 -4520956 + L2 LINE L2 2612 3313 0 736 182 18 0 chr2 246166898 246167068 -4520786 + (TGGA)n Simple_repeat Simple_repeat 2 174 0 284 250 43 8 chr2 246167132 246167242 -4520612 - MER5A DNA MER1_type -57 132 9 735 152 64 0 chr2 246167971 246168096 -4519758 + AluJb SINE Alu 2 134 -178 512 296 6 0 chr2 246168446 246168608 -4519246 + LTR16C LTR ERVL 329 491 0 186 43 0 0 chr2 246169802 246169825 -4518029 + (TA)n Simple_repeat Simple_repeat 1 23 0 1823 103 0 4 chr2 246170077 246170319 -4517535 - AluSx SINE Alu -24 288 48 315 0 0 0 chr2 246170630 246170665 -4517189 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 456 315 65 13 chr2 246173101 246173486 -4514368 + LTR33 LTR ERVL 103 521 0 2539 137 67 2 chr2 246173526 246173927 -4513927 + MSTA LTR MaLR 1 427 -1 790 141 31 43 chr2 246174052 246174215 -4513639 + MER20 DNA MER1_type 2 162 -57 2066 139 3 3 chr2 246175664 246175959 -4511895 + AluSx SINE Alu 5 299 -13 2126 191 5 0 chr2 246176154 246176542 -4511312 + MLT1B LTR MaLR 1 390 0 211 264 19 0 chr2 246177012 246177065 -4510789 + GA-rich Low_complexity Low_complexity 2 55 0 474 313 88 34 chr2 246178206 246178307 -4509547 - L2 LINE L2 -4 3309 3215 1777 166 152 8 chr2 246178307 246178681 -4509173 + MSTA LTR MaLR 1 428 0 474 313 88 34 chr2 246178681 246179045 -4508809 - L2 LINE L2 -98 3215 2819 2018 168 33 18 chr2 246179103 246179501 -4508353 + L1MB2 LINE L1 5766 6169 -2 2314 112 0 3 chr2 246179837 246180142 -4507712 + AluSg SINE Alu 1 304 -6 475 244 64 32 chr2 246180362 246180518 -4507336 + MER69A DNA AcHobo 2 162 -15 231 98 49 33 chr2 246181199 246181260 -4506594 + A-rich Low_complexity Low_complexity 4 65 0 310 319 62 59 chr2 246181392 246181538 -4506316 + L1ME LINE L1 5527 5676 -445 2200 114 3 3 chr2 246181538 246181837 -4506017 + AluSx SINE Alu 1 299 -13 310 319 62 59 chr2 246181837 246181963 -4505891 + L1ME LINE L1 5676 5800 -321 2362 84 0 10 chr2 246182818 246183128 -4504726 - AluSc SINE Alu -2 307 1 222 162 0 0 chr2 246183388 246183425 -4504429 + MIR SINE MIR 205 241 -21 243 88 0 0 chr2 246183450 246183484 -4504370 + (TTA)n Simple_repeat Simple_repeat 3 36 0 208 310 20 20 chr2 246184145 246184245 -4503609 - L2 LINE L2 0 3313 3214 270 143 0 0 chr2 246184404 246184453 -4503401 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 2642 187 19 37 chr2 246184456 246184801 -4503053 - MLT2B3 LTR ERVL -24 530 197 423 0 0 0 chr2 246184801 246184848 -4503006 + (TG)n Simple_repeat Simple_repeat 2 48 0 2642 187 19 37 chr2 246184848 246185042 -4502812 - MLT2B3 LTR ERVL -357 197 1 194 214 321 0 chr2 246185378 246185434 -4502420 + L2 LINE L2 3238 3311 -2 337 349 15 8 chr2 246185438 246185570 -4502284 - MIR SINE MIR -111 151 19 2174 126 3 7 chr2 246188428 246188730 -4499124 + AluSx SINE Alu 1 301 -11 2420 181 29 4 chr2 246188807 246189170 -4498684 - L1PB4 LINE L1 0 6156 5778 2148 108 26 10 chr2 246189170 246189477 -4498377 - AluSx SINE Alu 0 312 1 2420 181 29 4 chr2 246189477 246189565 -4498289 - L1PB4 LINE L1 -378 5778 5694 630 153 10 0 chr2 246189565 246189663 -4498191 - U6 snRNA snRNA -1 106 8 219 310 28 0 chr2 246189702 246189773 -4498081 + MIR3 SINE MIR 105 177 -31 234 254 18 0 chr2 246193535 246193590 -4494264 + (CAA)n Simple_repeat Simple_repeat 2 57 0 1864 146 20 3 chr2 246193651 246193945 -4493909 - AluSx SINE Alu -13 299 1 895 152 8 0 chr2 246193946 246194078 -4493776 - AluSq/x SINE Alu -178 134 2 246 233 67 56 chr2 246194106 246194196 -4493658 - MIR SINE MIR -118 144 54 192 158 0 0 chr2 246194490 246194528 -4493326 + A-rich Low_complexity Low_complexity 1 38 0 2369 89 20 3 chr2 246194984 246195288 -4492566 - AluSg1 SINE Alu 0 309 1 2296 118 3 0 chr2 246196360 246196665 -4491189 + AluSx SINE Alu 1 306 -6 363 268 29 58 chr2 246296665 246296803 -4391051 + HAL1 LINE L1 924 1057 -1450 804 141 25 0 chr2 246296807 246296928 -4390926 - AluSq/x SINE Alu -180 133 10 1075 130 0 0 chr2 246296929 246297091 -4390763 + AluSg/x SINE Alu 137 298 -14 1774 246 82 50 chr2 246297092 246297919 -4389935 + HAL1 LINE L1 1062 1915 -592 210 216 0 0 chr2 246298754 246298791 -4389063 + polypyrimidine Low_complexity Low_complexity 2 38 0 1923 160 0 6 chr2 246299035 246299348 -4388506 - AluJo SINE Alu -1 311 1 207 342 79 18 chr2 246299935 246300049 -4387805 + MIR3 SINE MIR 15 135 -73 2025 117 16 19 chr2 246300049 246300435 -4387419 - AluSg SINE Alu 0 385 1 214 121 17 52 chr2 246301163 246301221 -4386633 + GA-rich Low_complexity Low_complexity 2 57 0 212 298 182 25 chr2 246302165 246302330 -4385524 - MIR SINE MIR -23 185 5 327 274 119 30 chr2 246302491 246302659 -4385195 + MIR SINE MIR 73 255 -7 589 202 37 0 chr2 246302831 246302940 -4384914 - MER45A DNA AcHobo -28 150 38 347 187 15 15 chr2 246304017 246304219 -4383635 + CT-rich Low_complexity Low_complexity 1 202 0 3492 194 38 30 chr2 246304635 246305029 -4382825 + L1MB7 LINE L1 4615 5004 -1180 1613 178 27 7 chr2 246305029 246305327 -4382527 + AluJb SINE Alu 1 304 -8 3492 194 38 30 chr2 246305327 246306319 -4381535 + L1MB7 LINE L1 5004 6010 -174 198 167 0 0 chr2 246306323 246306359 -4381495 + (AAATG)n Simple_repeat Simple_repeat 2 37 0 202 320 0 0 chr2 246306631 246306681 -4381173 + L2 LINE L2 2941 2990 -282 1543 112 37 0 chr2 246306803 246307064 -4380790 + AluSq SINE Alu 60 328 0 14537 35 4 4 chr2 246309455 246311970 -4375884 - L1PA5 LINE L1 -16 6138 3627 674 317 31 31 chr2 246312065 246312384 -4375470 + MER102b DNA MER1_type 20 338 -3 675 35 83 0 chr2 246312571 246312715 -4375139 + (CA)n Simple_repeat Simple_repeat 2 157 0 641 273 21 16 chr2 246312715 246312902 -4374952 - LTR33A LTR ERVL -333 190 3 224 351 48 6 chr2 246313799 246313967 -4373887 + G-rich Low_complexity Low_complexity 6 180 0 241 232 27 60 chr2 246314002 246314187 -4373667 + (TGG)n Simple_repeat Simple_repeat 2 180 0 649 206 0 6 chr2 246316352 246316716 -4371138 + (CA)n Simple_repeat Simple_repeat 1 361 0 705 255 4 0 chr2 246316742 246317007 -4370847 + (CA)n Simple_repeat Simple_repeat 1 266 0 1470 209 76 8 chr2 246318204 246318573 -4369281 - L1MC1 LINE L1 0 6333 5940 569 256 58 6 chr2 246319240 246319396 -4368458 + L1ME4a LINE L1 5589 5752 -422 1334 94 0 0 chr2 246319524 246319704 -4368150 + AluSg/x SINE Alu 129 308 -2 180 0 0 0 chr2 246320307 246320327 -4367527 + (CA)n Simple_repeat Simple_repeat 2 21 0 999 171 120 32 chr2 246320458 246320674 -4367180 - MER46A DNA MER2_type 0 236 2 485 275 22 14 chr2 246320707 246320845 -4367009 - MER5B DNA MER1_type -37 141 3 326 306 123 88 chr2 246321178 246321389 -4366465 + L1ME4a LINE L1 5768 5997 -124 2230 101 0 7 chr2 246321389 246321697 -4366157 - AluSg SINE Alu -4 306 1 326 306 123 88 chr2 246321697 246321825 -4366029 + L1ME4a LINE L1 5997 6119 -2 554 44 0 0 chr2 246321916 246321984 -4365870 + U6 snRNA snRNA 1 68 -39 352 367 11 48 chr2 246322440 246322628 -4365226 - L1 LINE L1 -2233 3913 3733 666 209 22 22 chr2 246322639 246322773 -4365081 + AluJo SINE Alu 2 135 -177 827 286 23 0 chr2 246323515 246323732 -4364122 - MER58A DNA MER1_type -2 222 1 1822 156 0 0 chr2 246324308 246324618 -4363236 + AluSx SINE Alu 1 310 0 1726 182 58 17 chr2 246324859 246325272 -4362582 + MLT1C LTR MaLR 38 467 0 295 121 0 136 chr2 246325817 246325883 -4361971 - MLT2D LTR ERVL 0 414 358 696 115 20 20 chr2 246325888 246326036 -4361818 + GA-rich Low_complexity Low_complexity 1 148 0 820 170 32 75 chr2 246326146 246326277 -4361577 - MSTB1 LTR MaLR -252 180 58 2119 125 0 3 chr2 246326277 246326588 -4361266 - AluSx SINE Alu -2 310 1 820 170 32 75 chr2 246326588 246326644 -4361210 - MSTB1 LTR MaLR -374 58 1 244 221 177 89 chr2 246328179 246328236 -4359618 - MER5B DNA MER1_type -2 176 125 1832 157 0 13 chr2 246328236 246328541 -4359313 + AluJb SINE Alu 1 301 -11 244 221 177 89 chr2 246328541 246328641 -4359213 - MER5B DNA MER1_type -53 125 5 * 378 325 0 8 chr2 246328630 246328750 -4359104 + L2 LINE L2 3153 3271 -1 1989 129 36 0 chr2 246329234 246329536 -4358318 - AluSq SINE Alu 0 313 1 24 0 0 0 chr2 246329621 246329645 -4358209 + AT_rich Low_complexity Low_complexity 1 24 0 274 167 0 0 chr2 246329654 246329696 -4358158 + L1MC4 LINE L1 6961 7002 -1040 243 363 106 21 chr2 246329711 246330042 -4357812 + L1MC4 LINE L1 7086 7444 -598 370 366 108 26 chr2 246330064 246330452 -4357402 + L1MC5 LINE L1 7312 7731 -230 1496 210 34 22 chr2 246330456 246330813 -4357041 - L1MB5 LINE L1 -65 6109 5749 1070 166 26 57 chr2 246330814 246331043 -4356811 + MLT1A1 LTR MaLR 1 222 -143 263 28 28 0 chr2 246331969 246332005 -4355849 + (TG)n Simple_repeat Simple_repeat 2 38 0 194 0 39 0 chr2 246332006 246332032 -4355822 + (GA)n Simple_repeat Simple_repeat 2 28 0 183 156 0 0 chr2 246332273 246332305 -4355549 + (CTCA)n Simple_repeat Simple_repeat 4 35 0 22 35 0 0 chr2 246332839 246332868 -4354986 + AT_rich Low_complexity Low_complexity 1 29 0 239 290 73 32 chr2 246332888 246333012 -4354842 + L2 LINE L2 3183 3311 -2 371 277 20 0 chr2 246333409 246333510 -4354344 + MER103 DNA DNA 20 122 -44 889 133 8 0 chr2 246334299 246334427 -4353427 + FLAM_C SINE Alu 1 129 -4 265 309 39 55 chr2 246334438 246334619 -4353235 - MIR SINE MIR -38 224 47 2297 61 249 8 chr2 246334904 246335265 -4352589 - LTR7 LTR ERV1 -2 448 1 2317 83 62 13 chr2 246335265 246335639 -4352215 - HERVH LTR ERV1 0 7713 7322 1353 134 18 5 chr2 246335637 246335854 -4352000 - HERVH LTR ERV1 -1894 5819 5600 * 4404 126 3 1 chr2 246335855 246336516 -4351338 - HERVH LTR ERV1 -2564 5149 4488 3433 95 4 6 chr2 246336518 246337021 -4350833 - HERVH LTR ERV1 -3720 3993 3492 885 154 13 0 chr2 246337011 246337160 -4350694 - HERVH LTR ERV1 -4423 3290 3140 * 16035 97 14 36 chr2 246337156 246340311 -4347543 - HERVH LTR ERV1 -4728 2985 1 2854 66 90 28 chr2 246340313 246340735 -4347119 - LTR7 LTR ERV1 -2 448 1 276 253 24 0 chr2 246340757 246340840 -4347014 + MER45 DNA AcHobo 1 85 -93 2188 201 119 16 chr2 246341208 246341786 -4346068 - MLT1E1 LTR MaLR -5 649 12 203 346 58 19 chr2 246342083 246342187 -4345667 + MIR3 SINE MIR 90 197 -11 211 399 22 29 chr2 246342594 246342732 -4345122 - L3 LINE CR1 -2 1575 1439 1973 124 13 3 chr2 246343741 246344039 -4343815 + AluSx SINE Alu 6 306 -6 2095 125 3 10 chr2 246344044 246344357 -4343497 + AluJb SINE Alu 1 311 -1 418 198 0 0 chr2 246344366 246344447 -4343407 - MIR SINE MIR -14 248 168 596 313 139 11 chr2 246344449 246345011 -4342843 + MER115 DNA AcHobo 25 689 -4 571 314 168 16 chr2 246345452 246346216 -4341638 + L2 LINE L2 1785 2664 -650 1656 153 44 20 chr2 246346982 246347277 -4340577 - AluSx SINE Alu -4 308 7 204 172 0 0 chr2 246348825 246348883 -4338971 + (TG)n Simple_repeat Simple_repeat 1 58 0 331 343 75 0 chr2 246349661 246349795 -4338059 + L1ME LINE L1 5674 5817 -345 2027 118 10 0 chr2 246350017 246350306 -4337548 - AluSx SINE Alu -20 292 1 1019 110 35 23 chr2 246350528 246350701 -4337153 - L1PB1 LINE L1 -1 6150 5976 1390 231 129 0 chr2 246350815 246351165 -4336689 - MSTD LTR MaLR 0 396 2 202 182 0 0 chr2 246351268 246351301 -4336553 - MIR SINE MIR -21 241 209 287 208 0 0 chr2 246351323 246351371 -4336483 - MER5B DNA MER1_type 0 178 131 264 122 0 0 chr2 246351373 246351414 -4336440 + (T)n Simple_repeat Simple_repeat 1 41 0 905 231 91 54 chr2 246351930 246352302 -4335552 + L1MC5 LINE L1 7101 7486 -475 333 265 95 16 chr2 246352313 246352502 -4335352 + L1MC5 LINE L1 7724 7927 -34 1275 147 0 10 chr2 246353006 246353203 -4334651 + AluSg/x SINE Alu 101 295 -17 315 71 0 0 chr2 246353774 246353816 -4334038 + (A)n Simple_repeat Simple_repeat 1 42 0 359 309 69 17 chr2 246353936 246354111 -4333743 + MIR3 SINE MIR 21 204 -4 569 323 20 0 chr2 246354560 246354755 -4333099 + MIR SINE MIR 36 234 -28 1977 109 3 11 chr2 246355731 246356161 -4331693 - AluSq SINE Alu 0 428 1 391 292 63 45 chr2 246356417 246356708 -4331146 - MLT1I LTR MaLR -2 547 98 2126 104 3 28 chr2 246356740 246357058 -4330796 + AluSq SINE Alu 1 310 -3 193 398 11 0 chr2 246359485 246359573 -4328281 - L2 LINE L2 0 3313 3225 412 226 0 32 chr2 246360208 246360301 -4327553 + MER58B DNA MER1_type 234 323 -18 1062 163 60 0 chr2 246361362 246361546 -4326308 - AluJb SINE Alu -23 289 95 1785 117 23 0 chr2 246361573 246361837 -4326017 - AluSx SINE Alu -8 304 35 872 136 0 0 chr2 246363141 246363273 -4324581 + AluSq/x SINE Alu 1 132 -180 23 0 0 0 chr2 246363273 246363296 -4324558 + AT_rich Low_complexity Low_complexity 1 23 0 1633 177 53 0 chr2 246363306 246363589 -4324265 - AluJb SINE Alu -14 298 1 1507 215 80 15 chr2 246364022 246364422 -4323432 + MLT1C LTR MaLR 42 467 0 315 0 0 0 chr2 246364766 246364801 -4323053 + (TG)n Simple_repeat Simple_repeat 2 36 0 281 271 7 0 chr2 246366530 246366685 -4321169 + (CA)n Simple_repeat Simple_repeat 1 156 0 814 132 7 7 chr2 246369601 246369737 -4318117 - MSTB1 LTR MaLR 0 432 297 2122 121 0 0 chr2 246369942 246370240 -4317614 - AluSg SINE Alu -12 298 1 1694 174 0 20 chr2 246370242 246370546 -4317308 - AluJb SINE Alu -14 298 1 1820 196 127 14 chr2 246370622 246371040 -4316814 + MLT1C LTR MaLR 3 467 0 2293 86 7 0 chr2 246371069 246371370 -4316484 - AluSx SINE Alu -9 303 1 1307 161 70 66 chr2 246371668 246371954 -4315900 - AluJo SINE Alu -15 287 1 495 229 93 0 chr2 246372788 246372906 -4314948 + MIR SINE MIR 49 177 -85 2868 175 47 13 chr2 246372914 246373446 -4314408 - MER21A LTR ERV1 -6 925 376 1230 175 20 16 chr2 246373451 246373702 -4314152 - MER21A LTR ERV1 -667 264 13 274 351 61 6 chr2 246374629 246374794 -4313060 - MIR SINE MIR -74 188 15 531 359 73 0 chr2 246375027 246375286 -4312568 - L2 LINE L2 -737 2577 2300 544 267 94 113 chr2 246375943 246376288 -4311566 + L1ME LINE L1 38 371 -5699 894 144 0 0 chr2 246376288 246376420 -4311434 - FLAM_C SINE Alu -1 132 1 544 267 94 113 chr2 246376420 246376576 -4311278 + L1ME LINE L1 371 529 -5541 1148 244 126 43 chr2 246376903 246377317 -4310537 + MLT1C LTR MaLR 13 460 -7 423 331 107 13 chr2 246377368 246377743 -4310111 - L2 LINE L2 -352 2962 2553 424 236 0 101 chr2 246377766 246377965 -4309889 + G-rich Low_complexity Low_complexity 1 179 0 21 36 0 0 chr2 246379749 246379777 -4308077 + AT_rich Low_complexity Low_complexity 1 28 0 1900 141 16 19 chr2 246379823 246380136 -4307718 + AluJb SINE Alu 1 312 0 246 32 0 0 chr2 246380867 246380898 -4306956 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1037 52 0 15 chr2 246380997 246381132 -4306722 + L1PA4 LINE L1 6023 6155 0 229 223 126 58 chr2 246381252 246381355 -4306499 - MIR3 SINE MIR -36 172 63 306 227 0 0 chr2 246382914 246382989 -4304865 + CT-rich Low_complexity Low_complexity 1 75 0 2046 113 10 0 chr2 246382990 246383281 -4304573 - AluSq SINE Alu -17 296 3 437 268 72 144 chr2 246383341 246383564 -4304290 - HAL1 LINE L1 -1663 844 607 1711 200 91 55 chr2 246383564 246384015 -4303839 + MLT1C LTR MaLR 1 467 0 437 268 72 144 chr2 246384015 246384404 -4303450 - HAL1 LINE L1 -1900 607 276 216 326 22 22 chr2 246384575 246384664 -4303190 + L2 LINE L2 3224 3312 -1 2320 62 0 20 chr2 246384992 246385298 -4302556 - AluSg SINE Alu -10 300 1 1819 113 0 8 chr2 246385653 246385918 -4301936 - AluSq SINE Alu -12 301 39 237 310 0 0 chr2 246386098 246386156 -4301698 - MLT1K LTR MaLR 0 588 531 340 312 71 35 chr2 246386827 246386997 -4300857 - MIR3 SINE MIR -26 182 7 743 239 77 11 chr2 246387647 246387907 -4299947 - LTR16A1 LTR ERVL -23 434 158 1254 243 110 72 chr2 246387919 246388258 -4299596 - MLT1E LTR MaLR 0 593 214 1803 208 25 14 chr2 246388258 246388619 -4299235 - MLT1A1 LTR MaLR 0 365 1 1254 243 110 72 chr2 246388619 246388842 -4299012 - MLT1E LTR MaLR -379 214 1 1372 208 55 0 chr2 246389733 246390022 -4297832 - MLT2D LTR ERVL -109 305 1 21 57 0 0 chr2 246390456 246390491 -4297363 + AT_rich Low_complexity Low_complexity 1 35 0 1620 188 3 28 chr2 246391230 246391550 -4296304 - AluJo SINE Alu 0 312 1 301 281 12 0 chr2 246392979 246393062 -4294792 + (CA)n Simple_repeat Simple_repeat 1 84 0 1743 149 30 30 chr2 246393129 246393592 -4294262 + MER51A LTR ERV1 1 548 -86 258 302 0 12 chr2 246393625 246393711 -4294143 + (CA)n Simple_repeat Simple_repeat 2 86 0 286 274 34 17 chr2 246393777 246393894 -4293960 + MIR SINE MIR 100 218 -44 2142 115 6 6 chr2 246394529 246394841 -4293013 - AluSx SINE Alu 0 312 1 668 266 13 0 chr2 246395040 246395198 -4292656 - MER63A DNA MER1_type -10 200 41 2150 109 3 0 chr2 246395688 246395992 -4291862 + AluSx SINE Alu 1 305 -7 326 228 54 107 chr2 246397545 246397644 -4290210 + MIR SINE MIR 7 95 -167 2250 69 0 36 chr2 246397644 246397950 -4289904 - AluY SINE Alu -16 295 1 326 228 54 107 chr2 246397950 246398050 -4289804 + MIR SINE MIR 95 199 -63 196 293 49 41 chr2 246398322 246398445 -4289409 + MIR SINE MIR 23 146 -62 658 282 106 37 chr2 246399254 246399687 -4288167 + LTR16C LTR ERVL 20 482 -9 278 185 0 0 chr2 246400103 246400157 -4287697 + MER53 DNA DNA 6 59 -130 599 141 0 10 chr2 246400157 246400256 -4287598 + MER4A LTR ERV1 1 98 -566 2595 106 28 13 chr2 246400258 246400654 -4287200 + MER4A LTR ERV1 263 664 0 510 159 80 0 chr2 246400654 246400767 -4287087 + MER53 DNA DNA 56 177 -12 249 212 21 74 chr2 246401824 246402013 -4285841 + (CCA)n Simple_repeat Simple_repeat 2 180 0 407 331 157 23 chr2 246402600 246403041 -4284813 + L2 LINE L2 2814 3313 0 467 298 70 23 chr2 246404845 246405016 -4282838 + MIR SINE MIR 37 215 -47 478 308 173 28 chr2 246405250 246405650 -4282204 + L2 LINE L2 2410 2867 -447 266 316 119 0 chr2 246405703 246405896 -4281958 + L2 LINE L2 2959 3174 -139 564 234 73 118 chr2 246405896 246406268 -4281586 + LTR49 LTR ERV1 1 355 -240 401 238 71 16 chr2 246406311 246406437 -4281417 + LTR48 LTR ERV1 613 745 -42 283 345 0 17 chr2 246406479 246406595 -4281259 + L2 LINE L2 3168 3281 -32 248 137 20 0 chr2 246407386 246407437 -4280417 + (CA)n Simple_repeat Simple_repeat 1 52 0 267 164 16 33 chr2 246407508 246407569 -4280285 - MER81 DNA DNA -1 113 54 310 225 45 34 chr2 246408227 246408316 -4279538 + MIR SINE MIR 113 202 -60 2493 169 22 5 chr2 246408618 246409067 -4278787 + LTR24 LTR ERV1 1 457 -10 183 80 0 0 chr2 246409176 246409201 -4278653 + (CA)n Simple_repeat Simple_repeat 1 25 0 2319 165 26 13 chr2 246409258 246409646 -4278208 + MSTD LTR MaLR 1 393 -3 1721 112 8 4 chr2 246411043 246411302 -4276552 + AluSx SINE Alu 53 312 0 1931 248 63 23 chr2 246411342 246411910 -4275944 + MER67C LTR ERV1 120 710 0 648 140 93 27 chr2 246412679 246413012 -4274842 + LTR24 LTR ERV1 1 467 0 782 261 101 4 chr2 246413441 246413679 -4274175 + MER70B LTR ERVL 63 323 -255 1997 128 3 0 chr2 246415340 246415638 -4272216 + AluSq SINE Alu 1 299 -14 1642 193 40 21 chr2 246415713 246416039 -4271815 + L1MB5 LINE L1 5794 6129 -45 2143 110 0 0 chr2 246416039 246416338 -4271516 + AluSx SINE Alu 8 306 -6 1642 193 40 21 chr2 246416338 246416385 -4271469 + L1MB5 LINE L1 6129 6174 0 3089 170 55 3 chr2 246416392 246416969 -4270885 - L1MB3 LINE L1 0 6183 5577 245 179 30 75 chr2 246417618 246417685 -4270169 + MLT1E1 LTR MaLR 579 642 -12 394 257 46 9 chr2 246417695 246417804 -4270050 - MIR SINE MIR -70 192 80 3028 87 37 16 chr2 246419984 246420419 -4267435 + MLT2A1 LTR ERVL 1 444 0 325 309 56 0 chr2 246423770 246423896 -4263958 - MER94 DNA DNA 0 134 2 197 33 33 0 chr2 246425233 246425263 -4262591 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 443 264 6 0 chr2 246425857 246426035 -4261819 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 610 211 11 0 chr2 246426060 246426235 -4261619 + (TCCA)n Simple_repeat Simple_repeat 3 179 0 420 242 6 22 chr2 246426293 246426475 -4261379 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 183 246 0 0 chr2 246426499 246426556 -4261298 + (TCCA)n Simple_repeat Simple_repeat 2 58 0 641 181 7 0 chr2 246426668 246426806 -4261048 + (TCCA)n Simple_repeat Simple_repeat 2 140 0 708 195 0 0 chr2 246426839 246426998 -4260856 + (TCCA)n Simple_repeat Simple_repeat 1 159 0 1143 94 0 0 chr2 246427038 246427218 -4260636 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 356 252 204 7 chr2 246428002 246428149 -4259705 + LTR50 LTR ERVL 30 205 -590 496 258 106 32 chr2 246428186 246428403 -4259451 + LTR50 LTR ERVL 444 676 -119 1789 92 23 0 chr2 246429335 246429596 -4258258 + MER39B LTR ERV1 1 267 -386 840 149 0 34 chr2 246429596 246429744 -4258110 + FLAM_C SINE Alu 1 143 0 1830 167 60 0 chr2 246429744 246430091 -4257763 + MER39B LTR ERV1 262 629 -24 194 315 91 36 chr2 246432280 246432445 -4255409 - MER5A DNA MER1_type -7 182 9 861 150 0 7 chr2 246432588 246432728 -4255126 + FLAM_C SINE Alu 5 143 0 285 182 0 0 chr2 246432767 246432822 -4255032 + (CA)n Simple_repeat Simple_repeat 1 55 0 225 0 0 0 chr2 246433070 246433095 -4254759 + (CA)n Simple_repeat Simple_repeat 1 25 0 273 128 0 0 chr2 246433489 246433536 -4254318 + (CA)n Simple_repeat Simple_repeat 2 48 0 4318 220 31 65 chr2 246435334 246435584 -4252270 + Charlie1a DNA MER1_type 2 259 -2502 2176 125 0 0 chr2 246435584 246435896 -4251958 + AluSx SINE Alu 1 312 0 4318 220 31 65 chr2 246435896 246436629 -4251225 + Charlie1a DNA MER1_type 259 939 -1822 2194 125 0 3 chr2 246436629 246436942 -4250912 + AluSx SINE Alu 1 312 0 4318 220 31 65 chr2 246436942 246437165 -4250689 + Charlie1a DNA MER1_type 939 1168 -287 2027 177 60 42 chr2 246437182 246437633 -4250221 + LTR2B LTR ERV1 32 490 0 1270 165 46 18 chr2 246437633 246437918 -4249936 + Charlie1a DNA MER1_type 1163 1455 0 866 247 25 54 chr2 246439418 246439477 -4248377 - MLT1D LTR MaLR -10 495 436 2140 106 0 10 chr2 246439477 246439802 -4248052 + AluSq SINE Alu 1 313 0 866 247 25 54 chr2 246439802 246440187 -4247667 - MLT1D LTR MaLR -69 436 2 2024 138 3 0 chr2 246440846 246441158 -4246696 - AluSq SINE Alu 0 313 1 617 255 17 34 chr2 246441858 246442093 -4245761 + L1MC5 LINE L1 7330 7560 -401 33 0 0 0 chr2 246442142 246442175 -4245679 + AT_rich Low_complexity Low_complexity 1 33 0 1700 95 4 81 chr2 246442177 246442450 -4245404 - AluSq SINE Alu -61 252 1 295 253 35 0 chr2 246442628 246442715 -4245139 + MIR SINE MIR 119 208 -54 653 317 117 23 chr2 246442772 246443467 -4244387 - L2 LINE L2 -46 3267 2214 923 216 11 5 chr2 246443493 246443683 -4244171 - MER3 DNA MER1_type -18 191 1 345 352 14 0 chr2 246443694 246443839 -4244015 - L2 LINE L2 -1103 2211 2065 421 307 56 43 chr2 246443914 246443949 -4243905 - L1ME4a LINE L1 -174 5947 5914 1966 162 0 3 chr2 246443949 246444258 -4243596 + AluJb SINE Alu 1 308 -4 421 307 56 43 chr2 246444258 246444453 -4243401 - L1ME4a LINE L1 -207 5914 5714 633 210 0 49 chr2 246444566 246444728 -4243126 + MER3 DNA MER1_type 56 209 0 1641 148 36 92 chr2 246446691 246447048 -4240806 + MER1B DNA MER1_type 1 337 0 1350 203 63 124 chr2 246448596 246449134 -4238720 + MLT1D LTR MaLR 1 505 0 549 247 160 19 chr2 246449193 246449456 -4238398 + L2 LINE L2 2260 2559 -755 278 291 71 101 chr2 246449469 246449737 -4238117 + L2 LINE L2 2701 2960 -354 239 262 155 12 chr2 246451412 246451496 -4236358 - MER5B DNA MER1_type 0 178 83 708 126 0 18 chr2 246451504 246451615 -4236239 - FLAM_C SINE Alu -1 142 34 535 212 212 0 chr2 246451856 246451993 -4235861 + MER5A DNA MER1_type 4 169 -20 574 181 0 9 chr2 246453645 246453750 -4234104 - FRAM SINE Alu -10 166 63 384 313 57 17 chr2 246454819 246454995 -4232859 + MIR3 SINE MIR 24 206 -2 273 263 62 89 chr2 246457096 246457272 -4230582 - MIR SINE MIR -68 140 1 406 329 91 22 chr2 246458395 246458626 -4229228 + MIR SINE MIR 16 262 0 392 222 86 0 chr2 246458632 246458777 -4229077 - L1MC4a LINE L1 -297 5824 5678 2170 89 24 0 chr2 246458921 246459213 -4228641 - AluSc SINE Alu -10 299 1 1409 273 88 6 chr2 246459335 246459845 -4228009 - L1MC4 LINE L1 -208 7834 7283 2271 90 10 6 chr2 246459871 246460182 -4227672 + AluSx SINE Alu 1 312 0 324 231 13 26 chr2 246460336 246460414 -4227440 - MIR SINE MIR -64 144 68 397 272 63 106 chr2 246461391 246461722 -4226132 + L2 LINE L2 2952 3268 -4 196 218 244 0 chr2 246462685 246462763 -4225091 - MIR SINE MIR -67 141 45 310 308 42 17 chr2 246463991 246464111 -4223743 + HERVL LTR ERVL 362 484 -4512 773 142 7 26 chr2 246464119 246464274 -4223580 + MER53 DNA DNA 24 175 -14 372 356 92 37 chr2 246464323 246464618 -4223236 + HERVL LTR ERVL 504 814 -4182 1429 341 41 36 chr2 246464851 246465654 -4222200 + HERVL LTR ERVL 1221 2027 -3737 890 341 53 16 chr2 246465659 246466192 -4221662 + HERVL LTR ERVL 2558 3124 -1900 340 332 127 9 chr2 246466190 246466556 -4221298 + HERVL LTR ERVL 3905 4334 -1430 * 842 240 19 17 chr2 246466629 246466868 -4220986 + L1MDb LINE L1 34 302 -6241 679 244 32 9 chr2 246466925 246467146 -4220708 + L1MDb LINE L1 1056 1281 -5262 264 267 155 17 chr2 246467180 246467296 -4220558 + MIR3 SINE MIR 32 163 -45 545 310 77 53 chr2 246467308 246467802 -4220052 + MLT1J LTR MaLR 3 508 -3 371 267 17 17 chr2 246467848 246467964 -4219890 - MIR SINE MIR -34 228 113 203 196 36 0 chr2 246468607 246468663 -4219191 + (CCCCG)n Simple_repeat Simple_repeat 3 60 0 180 77 0 0 chr2 246469420 246469446 -4218408 + (CCCCAA)n Simple_repeat Simple_repeat 1 26 0 548 288 165 2 chr2 246470180 246470610 -4217244 - LTR33 LTR ERVL -5 516 17 311 297 14 69 chr2 246471227 246471372 -4216482 - MIR SINE MIR -80 182 46 350 329 138 4 chr2 246473055 246473280 -4214574 - Tigger8 DNA MER2_type -94 572 318 197 178 22 0 chr2 246473301 246473346 -4214508 + CT-rich Low_complexity Low_complexity 3 48 0 2630 91 10 44 chr2 246474180 246474566 -4213288 + THE1C LTR MaLR 1 373 -2 3322 216 14 21 chr2 246474641 246475198 -4212656 + L1MD2 LINE L1 4740 5299 -1060 1893 45 0 13 chr2 246475198 246475422 -4212432 + AluY SINE Alu 83 303 -8 3322 216 14 21 chr2 246475422 246476030 -4211824 + L1MD2 LINE L1 5299 5902 -457 275 322 94 27 chr2 246476475 246476624 -4211230 + MIR SINE MIR 25 183 -79 192 152 0 0 chr2 246477120 246477153 -4210701 + CT-rich Low_complexity Low_complexity 5 37 0 1831 187 0 16 chr2 246479803 246480182 -4207672 - L1MB2 LINE L1 -3 6168 5796 1750 139 0 0 chr2 246480285 246480530 -4207324 + AluJb SINE Alu 50 294 -18 185 233 0 67 chr2 246480596 246480656 -4207198 - L2 LINE L2 -8 3305 3250 266 235 0 0 chr2 246480780 246480848 -4207006 + L1 LINE L1 4420 4487 -1659 1048 152 10 5 chr2 246480848 246481045 -4206809 - L1MB2 LINE L1 -559 5775 5578 726 246 54 9 chr2 246481019 246481243 -4206611 - L1MB2 LINE L1 -1216 4930 4697 * 1825 196 75 30 chr2 246481248 246481742 -4206112 - L1MB2 LINE L1 -2266 3880 3365 387 228 0 0 chr2 246482086 246482178 -4205676 + CT-rich Low_complexity Low_complexity 1 92 0 754 129 0 39 chr2 246482212 246482390 -4205464 + (TTCC)n Simple_repeat Simple_repeat 1 171 0 345 157 24 12 chr2 246482399 246482482 -4205372 + CT-rich Low_complexity Low_complexity 3 86 0 439 45 30 0 chr2 246482527 246482593 -4205261 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 752 143 0 0 chr2 246487805 246487917 -4199937 + AluSp SINE Alu 14 125 -188 379 353 8 0 chr2 246491928 246492047 -4195807 + MIR3 SINE MIR 43 162 -46 714 309 122 27 chr2 246492192 246492603 -4195251 - L2 LINE L2 -8 3305 2856 240 304 116 49 chr2 246492705 246493093 -4194761 - L2 LINE L2 -1838 1476 1063 187 282 14 56 chr2 246493420 246493491 -4194363 - MIR SINE MIR -5 257 190 304 222 43 77 chr2 246493870 246493987 -4193867 + L1MC4 LINE L1 6602 6714 -1328 2009 147 38 0 chr2 246494407 246494527 -4193327 + AluSx SINE Alu 1 115 -197 207 0 0 0 chr2 246494527 246494550 -4193304 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2009 147 38 0 chr2 246494550 246494722 -4193132 + AluSx SINE Alu 115 304 -8 229 228 0 18 chr2 246494734 246494791 -4193063 - L3 LINE CR1 -177 1400 1345 188 291 163 23 chr2 246494797 246494883 -4192971 - L3 LINE CR1 -78 1499 1402 2144 133 0 0 chr2 246495159 246495459 -4192395 - AluSx SINE Alu -12 300 1 22 0 0 0 chr2 246497539 246497561 -4190293 + AT_rich Low_complexity Low_complexity 1 22 0 1821 168 48 123 chr2 246500719 246500782 -4187072 - MLT1D LTR MaLR 0 505 439 2296 85 0 0 chr2 246500782 246501063 -4186791 + AluSq SINE Alu 1 281 -32 1821 168 48 123 chr2 246501063 246501542 -4186312 - MLT1D LTR MaLR -66 439 4 225 220 0 17 chr2 246503193 246503252 -4184602 + MER103 DNA DNA 4 61 -105 492 266 261 43 chr2 246503448 246504165 -4183689 + L2 LINE L2 1280 2152 -1162 23 0 0 0 chr2 246504970 246504993 -4182861 + AT_rich Low_complexity Low_complexity 1 23 0 281 73 0 0 chr2 246505017 246505058 -4182796 - Alu SINE Alu -10 292 252 1406 141 0 5 chr2 246505159 246505372 -4182482 - AluJb SINE Alu -99 213 2 2062 233 55 4 chr2 246505388 246505929 -4181925 - MER90 LTR ERV1 -6 569 1 2451 84 0 0 chr2 246506151 246506447 -4181407 + AluSg SINE Alu 1 296 -14 24 32 0 0 chr2 246506456 246506487 -4181367 + AT_rich Low_complexity Low_complexity 1 31 0 1667 147 15 87 chr2 246506526 246506860 -4180994 + AluJb SINE Alu 1 310 -2 221 321 52 52 chr2 246507053 246507187 -4180667 + MIR3 SINE MIR 74 207 -1 205 318 0 0 chr2 246508371 246508434 -4179420 - MIR3 SINE MIR -1 207 145 215 255 0 20 chr2 246511291 246511342 -4176512 + (TATG)n Simple_repeat Simple_repeat 1 50 0 2106 141 29 5 chr2 246511364 246511739 -4176115 - MLT1B LTR MaLR -6 384 1 647 211 5 0 chr2 246511743 246511964 -4175890 + (CA)n Simple_repeat Simple_repeat 1 222 0 328 279 9 36 chr2 246512107 246512218 -4175636 + MIR3 SINE MIR 85 192 -16 297 307 196 0 chr2 246517747 246517910 -4169944 + L2 LINE L2 3028 3222 -50 667 82 0 0 chr2 246518589 246518674 -4169180 - AluY SINE Alu -15 296 212 223 294 98 69 chr2 246518674 246518776 -4169078 + L2 LINE L2 3168 3272 0 2153 142 3 0 chr2 246520007 246520318 -4167536 + AluJo SINE Alu 1 312 0 309 125 14 28 chr2 246520627 246520699 -4167155 + (CCAA)n Simple_repeat Simple_repeat 1 71 0 241 270 81 27 chr2 246520897 246521008 -4166846 + HAL1 LINE L1 795 911 -1596 355 314 136 23 chr2 246521035 246521344 -4166510 + LTR16B LTR ERVL 1 344 -120 262 362 37 45 chr2 246521646 246521889 -4165965 + MERVL LTR ERVL 2116 2356 -3129 * 562 288 40 36 chr2 246521873 246522147 -4165707 + MERVL LTR ERVL 3441 3715 -2049 403 281 55 7 chr2 246522447 246522593 -4165261 + HAL1 LINE L1 1095 1247 -1260 642 294 45 48 chr2 246523255 246523544 -4164310 + HAL1 LINE L1 1464 1751 -756 24 0 0 0 chr2 246523948 246523972 -4163882 + AT_rich Low_complexity Low_complexity 1 24 0 971 210 0 0 chr2 246524133 246524309 -4163545 - AluJb SINE Alu 0 312 137 348 205 12 0 chr2 246524311 246524394 -4163460 - HAL1 LINE L1 -1164 1343 1260 238 261 90 87 chr2 246524407 246524508 -4163346 - HAL1 LINE L1 -1296 1211 1112 2248 113 0 7 chr2 246524508 246524817 -4163037 - AluSx SINE Alu -5 307 1 238 261 90 87 chr2 246524817 246525049 -4162805 - HAL1 LINE L1 -1395 1112 877 463 311 95 33 chr2 246525114 246525420 -4162434 - HAL1 LINE L1 -1744 763 439 1194 218 113 60 chr2 246526385 246526711 -4161143 - MLT1C LTR MaLR -4 463 107 2217 108 3 3 chr2 246526711 246527007 -4160847 - AluSx SINE Alu -16 296 1 1194 218 113 60 chr2 246527007 246527115 -4160739 - MLT1C LTR MaLR -360 107 6 308 299 46 91 chr2 246528754 246528995 -4158859 + L2 LINE L2 2842 3071 -201 414 343 66 14 chr2 246529357 246529570 -4158284 - MIR SINE MIR -2 260 37 474 255 128 56 chr2 246529576 246529952 -4157902 - LTR16A1 LTR ERVL 0 457 55 242 250 34 23 chr2 246530304 246530392 -4157462 + L2 LINE L2 3184 3272 0 1576 226 48 40 chr2 246531252 246531638 -4156216 + L1ME2 LINE L1 5680 6227 -107 2455 100 0 0 chr2 246531638 246531948 -4155906 - AluSg SINE Alu 0 310 1 1576 226 48 40 chr2 246531948 246532021 -4155833 + L1ME2 LINE L1 6227 6298 -36 279 239 22 11 chr2 246532000 246532092 -4155762 + L1ME1 LINE L1 6074 6166 0 * 1899 172 63 41 chr2 246532544 246532985 -4154869 - LTR8A LTR ERV1 0 727 277 * 2425 148 28 9 chr2 246532978 246533405 -4154449 + MER44D DNA MER2_type 115 604 -1 552 290 51 31 chr2 246533406 246533661 -4154193 - LTR33A LTR ERVL -44 479 220 619 88 59 0 chr2 246533724 246533933 -4153921 + (CA)n Simple_repeat Simple_repeat 1 221 0 500 332 79 12 chr2 246534869 246535110 -4152744 - MIR SINE MIR 0 262 6 269 210 15 17 chr2 246535587 246535658 -4152196 - L1M3 LINE L1 -588 5580 5505 439 269 34 47 chr2 246535733 246535882 -4151972 + MLT1I LTR MaLR 71 217 -192 888 286 107 88 chr2 246535964 246536496 -4151358 + MLT1H1 LTR MaLR 1 549 0 510 70 0 0 chr2 246537362 246537433 -4150421 + (TCCA)n Simple_repeat Simple_repeat 1 71 0 253 360 0 26 chr2 246537601 246537715 -4150139 - MIR SINE MIR -1 261 151 918 277 141 6 chr2 246539205 246539552 -4148302 - LTR16C LTR ERVL 0 491 98 215 317 115 0 chr2 246539637 246539741 -4148113 + MIR3 SINE MIR 2 117 -91 1609 141 8 8 chr2 246539786 246540027 -4147827 - LTR39 LTR ERV1 0 783 543 2684 70 5 24 chr2 246540027 246540398 -4147456 + THE1B LTR MaLR 1 364 0 * 2779 146 85 14 chr2 246540398 246540912 -4146942 - LTR39 LTR ERV1 -232 551 1 546 298 81 12 chr2 246541033 246541281 -4146573 + MLT1K LTR MaLR 122 386 -202 420 123 0 0 chr2 246541310 246541383 -4146471 + (GA)n Simple_repeat Simple_repeat 2 74 0 305 258 31 31 chr2 246542888 246542985 -4144869 + L3b LINE CR1 1281 1377 -206 1130 265 85 5 chr2 246543514 246543914 -4143940 + L1M4 LINE L1 4850 5281 -865 273 254 42 0 chr2 246543979 246544050 -4143804 + MER3 DNA MER1_type 14 87 -122 277 309 117 38 chr2 246544847 246545138 -4142716 + L2 LINE L2 2998 3311 -2 204 214 18 36 chr2 246546787 246546843 -4141011 + L2 LINE L2 3210 3264 -49 1739 190 38 6 chr2 246547820 246548162 -4139692 + MLT1A1 LTR MaLR 1 353 -12 259 235 222 0 chr2 246548413 246548494 -4139360 + LTR16B LTR ERVL 193 291 -173 27 0 0 0 chr2 246550956 246550983 -4136871 + AT_rich Low_complexity Low_complexity 1 27 0 2660 113 128 60 chr2 246552635 246553062 -4134792 - MER4A LTR ERV1 -77 587 113 2268 88 10 26 chr2 246553062 246553367 -4134487 + AluSp SINE Alu 1 300 -13 2660 113 128 60 chr2 246553367 246553487 -4134367 - MER4A LTR ERV1 -551 113 3 2163 202 39 2 chr2 246554098 246554583 -4133271 - L1MB5 LINE L1 -8 6166 5664 310 323 73 30 chr2 246559088 246559252 -4128602 + MIR SINE MIR 25 195 -67 725 201 7 0 chr2 246560113 246560252 -4127602 - AluSg/x SINE Alu -38 274 135 300 344 19 13 chr2 246561312 246561466 -4126388 + L3b LINE CR1 1115 1269 -314 450 0 0 0 chr2 246563692 246563742 -4124112 + (T)n Simple_repeat Simple_repeat 1 50 0 21 0 0 0 chr2 246563742 246563763 -4124091 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 246563867 246563889 -4123965 + GC_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr2 246563899 246563923 -4123931 + (T)n Simple_repeat Simple_repeat 1 24 0 2314 82 0 70 chr2 246564190 246564521 -4123333 - AluSg SINE Alu 0 310 3 401 287 42 24 chr2 246564617 246564784 -4123070 + MIR3 SINE MIR 33 202 -6 209 114 29 0 chr2 246565024 246565059 -4122795 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 302 307 47 8 chr2 246565223 246565350 -4122504 - MIR SINE MIR -17 245 114 637 76 0 0 chr2 246566166 246566258 -4121596 - AluSp/q SINE Alu -3 310 219 356 299 25 25 chr2 246616834 246616991 -4070863 - L1ME LINE L1 -5639 431 275 349 335 32 7 chr2 246617066 246617221 -4070633 - L1ME LINE L1 -5901 169 11 207 0 0 0 chr2 246618071 246618094 -4069760 + (A)n Simple_repeat Simple_repeat 1 23 0 848 185 6 0 chr2 246618115 246618272 -4069582 - AluSg/x SINE Alu -7 303 146 649 268 107 35 chr2 246618728 246619045 -4068809 - L2 LINE L2 -882 2432 2093 297 305 24 0 chr2 246619055 246619137 -4068717 - L2 LINE L2 -1402 1912 1829 643 208 28 14 chr2 246619137 246619281 -4068573 + L1M3 LINE L1 5582 5727 -444 294 93 74 0 chr2 246619257 246619311 -4068543 + L1 LINE L1 4323 4380 -1766 * 877 194 17 46 chr2 246619314 246619455 -4068399 + FRAM SINE Alu 1 138 -174 2266 131 144 5 chr2 246619455 246619829 -4068025 + MSTA LTR MaLR 3 428 0 877 194 17 46 chr2 246619829 246619862 -4067992 + FRAM SINE Alu 138 170 -6 5711 154 10 22 chr2 246619862 246621164 -4066690 + L1MA8 LINE L1 4379 5696 -595 2325 85 3 0 chr2 246621164 246621459 -4066395 - AluSx SINE Alu -16 296 1 5711 154 10 22 chr2 246621459 246621709 -4066145 + L1MA8 LINE L1 5696 5917 -374 2258 116 3 0 chr2 246621709 246622019 -4065835 - AluSx SINE Alu -1 311 1 5711 154 10 22 chr2 246622019 246622063 -4065791 + L1MA8 LINE L1 5917 5960 -331 410 263 73 53 chr2 246623969 246624156 -4063698 + HAL1b LINE L1 191 390 -958 180 0 0 0 chr2 246624156 246624176 -4063678 + (CAA)n Simple_repeat Simple_repeat 2 21 0 410 263 73 53 chr2 246624176 246624330 -4063524 + HAL1b LINE L1 390 539 -809 362 263 68 38 chr2 246624494 246624627 -4063227 + MER5B DNA MER1_type 28 164 -14 468 309 55 47 chr2 246624697 246625171 -4062683 + L1M4 LINE L1 4234 4716 -1430 2328 121 13 46 chr2 246625171 246625559 -4062295 - THE1C LTR MaLR 0 375 1 468 309 55 47 chr2 246625559 246625740 -4062114 + L1M4 LINE L1 4716 4894 -1252 21 0 0 0 chr2 246625744 246625765 -4062089 + AT_rich Low_complexity Low_complexity 1 21 0 1879 157 0 7 chr2 246625766 246626059 -4061795 - AluJo SINE Alu -20 292 2 321 219 0 41 chr2 246626241 246626314 -4061540 + L1MC4a LINE L1 1995 2064 -4362 1762 153 14 0 chr2 246626320 246626595 -4061259 - AluJo SINE Alu -25 287 9 287 256 99 88 chr2 246626798 246627071 -4060783 + L1MC4a LINE L1 5548 5823 -2265 429 303 101 46 chr2 246627114 246627530 -4060324 + L1MC4a LINE L1 5782 6220 -1868 1675 201 61 19 chr2 246628620 246629049 -4058805 - MLT1C LTR MaLR -1 466 20 2122 188 84 11 chr2 246629400 246629853 -4058001 + MER66B LTR ERV1 1 486 0 1772 165 34 39 chr2 246629936 246630294 -4057560 + MLT1A1 LTR MaLR 1 356 -9 270 244 137 46 chr2 246631396 246631527 -4056327 - L1ME LINE L1 -388 5733 5591 477 325 150 0 chr2 246632676 246632876 -4054978 + MIR SINE MIR 15 244 -18 326 109 31 0 chr2 246633383 246633447 -4054407 + CT-rich Low_complexity Low_complexity 4 69 0 756 130 5 43 chr2 246633448 246633633 -4054221 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 244 105 0 0 chr2 246633641 246633679 -4054175 - ALR/Alpha Satellite centromeric -59 113 76 4799 74 0 42 chr2 246633679 246634352 -4053502 - L1PA8 LINE L1 -4 6168 5524 269 233 12 35 chr2 246634982 246635068 -4052786 + MER31A LTR ERV1 364 447 -38 283 185 92 0 chr2 246635274 246635339 -4052515 + L2 LINE L2 3002 3072 -200 631 300 125 20 chr2 246635472 246636016 -4051838 - L1ME4a LINE L1 -15 6106 5506 331 333 93 0 chr2 246637163 246637313 -4050541 + MIR SINE MIR 79 242 -20 225 370 57 10 chr2 246637360 246637552 -4050302 + MIR SINE MIR 39 239 -23 222 261 0 0 chr2 246638236 246638297 -4049557 + (CGTG)n Simple_repeat Simple_repeat 1 61 0 411 188 30 90 chr2 246640337 246640470 -4047384 - MIR SINE MIR -38 224 100 373 304 105 11 chr2 246640502 246640683 -4047171 - L2 LINE L2 -913 2401 2204 481 245 42 7 chr2 246641126 246641269 -4046585 + Charlie4 DNA MER1_type 105 252 -1709 388 164 0 0 chr2 246641432 246641505 -4046349 + LTR50 LTR ERVL 211 283 -512 264 222 16 0 chr2 246641719 246641782 -4046072 + LTR50 LTR ERVL 732 795 0 573 222 30 0 chr2 246641802 246641937 -4045917 + Charlie4 DNA MER1_type 1808 1946 -15 335 344 57 40 chr2 246642086 246642333 -4045521 - L1ME4a LINE L1 -1 6120 5870 1027 142 43 98 chr2 246642395 246642649 -4045205 - L1MB3 LINE L1 -4 6179 5940 2111 127 10 16 chr2 246642920 246643234 -4044620 - AluSx SINE Alu 0 312 1 2387 171 22 0 chr2 246643452 246643896 -4043958 - L1MB3 LINE L1 -2 6181 5728 755 185 0 30 chr2 246643941 246644076 -4043778 + FLAM_C SINE Alu 1 131 -2 1368 209 90 3 chr2 246644871 246645206 -4042648 + MLT1A1 LTR MaLR 2 365 0 252 260 52 31 chr2 246646102 246646198 -4041656 - L2 LINE L2 -4 3268 3171 230 163 0 0 chr2 246646408 246646451 -4041403 + L1ME4a LINE L1 5975 6017 -104 269 196 34 81 chr2 246647305 246647453 -4040401 + C-rich Low_complexity Low_complexity 6 146 0 36 40 0 0 chr2 246647464 246647514 -4040340 + GC_rich Low_complexity Low_complexity 1 50 0 32 0 0 0 chr2 246647677 246647709 -4040145 + GC_rich Low_complexity Low_complexity 1 32 0 181 309 36 0 chr2 246648586 246648641 -4039213 + L2 LINE L2 2911 2967 -305 310 272 211 35 chr2 246648890 246649118 -4038736 + L2 LINE L2 3005 3272 0 2401 103 7 0 chr2 246649378 246649688 -4038166 - AluSx SINE Alu 0 312 1 357 232 97 65 chr2 246649792 246649977 -4037877 + MIR SINE MIR 17 207 -55 205 278 56 14 chr2 246650463 246650535 -4037319 - L2 LINE L2 -193 3079 3005 354 264 70 30 chr2 246652163 246652364 -4035490 + LTR16A1 LTR ERVL 160 368 -89 212 342 155 6 chr2 246653556 246653717 -4034137 - MIR SINE MIR -32 230 46 630 269 60 0 chr2 246653954 246654121 -4033733 + L2 LINE L2 2642 2818 -496 922 257 28 16 chr2 246654321 246654570 -4033284 + MIR SINE MIR 10 261 -1 1460 244 48 67 chr2 246654584 246655165 -4032689 - HAL1 LINE L1 -374 2133 1564 286 286 45 0 chr2 246655165 246655277 -4032577 + L1MC4a LINE L1 5815 5931 -1877 1170 223 124 25 chr2 246655457 246655731 -4032123 + AluJo SINE Alu 2 302 0 1938 162 7 13 chr2 246655737 246656045 -4031809 + AluSx SINE Alu 5 310 -2 1105 246 151 31 chr2 246656046 246656622 -4031232 - HAL1 LINE L1 -1054 1453 809 198 261 29 43 chr2 246656732 246656801 -4031053 - MIR SINE MIR -188 74 7 2228 142 0 0 chr2 246657102 246657411 -4030443 + AluSx SINE Alu 1 309 -3 3976 107 0 8 chr2 246657901 246658432 -4029422 - MER1A DNA MER1_type 0 527 1 523 316 6 0 chr2 246658506 246658677 -4029177 + MER3 DNA MER1_type 38 209 0 1065 202 18 18 chr2 246659677 246659895 -4027959 - MER20 DNA MER1_type -1 218 1 502 162 30 0 chr2 246660229 246660328 -4027526 - MLT1A2 LTR MaLR -21 353 252 762 120 0 0 chr2 246661038 246661146 -4026708 + FLAM_C SINE Alu 29 136 -7 2072 126 52 0 chr2 246661146 246661432 -4026422 + AluSx SINE Alu 1 301 -11 21 36 0 0 chr2 246661650 246661678 -4026176 + AT_rich Low_complexity Low_complexity 1 28 0 187 353 143 0 chr2 246661993 246662112 -4025742 + MIR SINE MIR 89 224 -38 306 249 58 136 chr2 246662216 246662747 -4025107 + L1M3e LINE L1 1147 1636 -5394 470 238 40 8 chr2 246663174 246663300 -4024554 + MER5A DNA MER1_type 42 171 -18 330 138 0 0 chr2 246663625 246663683 -4024171 + (TGAA)n Simple_repeat Simple_repeat 1 58 0 1554 217 79 0 chr2 246664584 246664962 -4022892 - L1MD3 LINE L1 -192 7803 7396 446 211 9 9 chr2 246664962 246665071 -4022783 - MLT1F1 LTR MaLR -457 110 2 287 192 41 27 chr2 246665072 246665145 -4022709 - L1MD3 LINE L1 -717 7278 7205 420 194 41 0 chr2 246666019 246666117 -4021737 + Charlie7 DNA MER1_type 1981 2082 -530 22 0 0 0 chr2 246666132 246666154 -4021700 + AT_rich Low_complexity Low_complexity 1 22 0 1440 83 16 0 chr2 246666162 246666414 -4021440 - L1PA11 LINE L1 -2 6172 5864 1373 191 46 55 chr2 246666442 246666809 -4021045 + MLT1A2 LTR MaLR 11 374 0 263 159 0 0 chr2 246667255 246667299 -4020555 - MLT1I LTR MaLR -221 188 145 840 148 0 15 chr2 246668361 246668496 -4019358 + FLAM_C SINE Alu 1 133 0 2170 112 7 7 chr2 246669164 246669459 -4018395 + AluSq SINE Alu 1 295 -18 591 266 53 144 chr2 246669860 246670747 -4017107 - L2 LINE L2 0 3313 2446 650 279 111 52 chr2 246671020 246671580 -4016274 - L1MC5 LINE L1 -37 7924 7332 906 185 57 9 chr2 246671582 246671809 -4016045 - Charlie5 DNA MER1_type 0 2624 2387 2191 126 0 7 chr2 246672223 246672524 -4015330 - AluSx SINE Alu -13 299 1 577 155 19 19 chr2 246672622 246672725 -4015129 - MIR SINE MIR -68 194 92 2344 89 3 0 chr2 246673333 246673624 -4014230 - AluSq SINE Alu -21 292 1 479 225 0 0 chr2 246673830 246673919 -4013935 - MER2 DNA MER2_type 0 345 257 773 179 0 8 chr2 246673927 246674061 -4013793 + AluJo SINE Alu 2 134 -178 1623 117 14 32 chr2 246674065 246674347 -4013507 - MER2 DNA MER2_type -68 277 1 1935 152 3 13 chr2 246674422 246674731 -4013123 + AluJb SINE Alu 7 312 0 2232 123 0 0 chr2 246675083 246675383 -4012471 - AluSx SINE Alu -12 300 1 2529 11 0 0 chr2 246675392 246675663 -4012191 - AluYa5 SINE Alu -8 303 33 227 337 116 0 chr2 246676068 246676154 -4011700 - MIR SINE MIR -116 146 51 240 276 179 7 chr2 246676298 246676443 -4011411 + L2 LINE L2 727 896 -2418 749 197 21 9 chr2 246676659 246676836 -4011018 + MER20 DNA MER1_type 21 194 -25 2083 128 7 14 chr2 246677906 246678202 -4009652 + AluSx SINE Alu 1 294 -18 1518 179 0 47 chr2 246678521 246678817 -4009037 + AluJb SINE Alu 1 282 -30 207 342 118 40 chr2 246679677 246679999 -4007855 + L2 LINE L2 1990 2336 -978 192 152 0 0 chr2 246680197 246680230 -4007624 + (TCCA)n Simple_repeat Simple_repeat 3 35 0 255 259 62 25 chr2 246680843 246680924 -4006930 + MIR SINE MIR 42 125 -83 2415 96 3 0 chr2 246681039 246681341 -4006513 + AluSx SINE Alu 1 303 -9 2235 133 0 9 chr2 246682160 246682475 -4005379 - AluSx SINE Alu 0 312 1 446 128 26 0 chr2 246682854 246682932 -4004922 + MADE1 DNA Mariner 1 80 0 433 316 87 19 chr2 246683589 246683795 -4004059 - MIR SINE MIR -42 220 1 2442 90 0 0 chr2 246684171 246684482 -4003372 + AluSx SINE Alu 1 311 -1 412 247 14 41 chr2 246685543 246685838 -4002016 + (CGGGG)n Simple_repeat Simple_repeat 1 287 0 22 70 0 0 chr2 246686083 246686126 -4001728 + GC_rich Low_complexity Low_complexity 1 43 0 1001 222 66 54 chr2 246687707 246688041 -3999813 + MER46C DNA MER2_type 1 338 0 508 286 79 56 chr2 246690211 246690463 -3997391 - MIR SINE MIR -3 259 2 210 233 0 0 chr2 246690501 246690544 -3997310 + (CTG)n Simple_repeat Simple_repeat 1 43 0 2071 130 13 7 chr2 246690737 246691038 -3996816 - AluSq SINE Alu -10 303 1 352 297 73 48 chr2 246691950 246692115 -3995739 - MIR3 SINE MIR -4 204 36 1237 269 126 28 chr2 246692553 246693057 -3994797 - MER20B DNA MER1_type -2 781 191 2593 77 3 0 chr2 246693057 246693367 -3994487 - AluSx SINE Alu -1 311 1 1237 269 126 28 chr2 246693367 246693546 -3994308 - MER20B DNA MER1_type -592 191 31 238 291 64 71 chr2 246697036 246697177 -3990677 + L2 LINE L2 2613 2752 -562 2380 102 0 3 chr2 246697864 246698169 -3989685 - AluSx SINE Alu -8 304 1 1967 186 108 51 chr2 246698996 246699095 -3988759 - MLT1E1 LTR MaLR -7 647 555 1984 144 0 7 chr2 246699095 246699393 -3988461 + AluJb SINE Alu 1 296 -16 1967 186 108 51 chr2 246699393 246699905 -3987949 - MLT1E1 LTR MaLR -99 555 1 253 224 119 0 chr2 246699909 246699976 -3987878 - MLT1E1 LTR MaLR -579 75 1 225 307 0 40 chr2 246700023 246700124 -3987730 + CT-rich Low_complexity Low_complexity 1 97 0 2002 149 0 3 chr2 246700349 246700644 -3987210 - AluJb SINE Alu -18 294 1 1021 180 0 32 chr2 246701002 246701191 -3986663 + FAM SINE Alu 1 47 -2 239 355 48 8 chr2 246701536 246701660 -3986194 + L3 LINE CR1 1341 1469 -108 315 317 42 21 chr2 246701700 246701842 -3986012 + MIR3 SINE MIR 49 193 -15 909 240 0 29 chr2 246701882 246702090 -3985764 + MIR SINE MIR 60 261 -1 247 246 0 0 chr2 246703237 246703294 -3984560 + Charlie8 DNA MER1_type 85 141 -2276 2195 118 0 26 chr2 246703571 246703876 -3983978 - AluSx SINE Alu -15 297 1 2160 119 3 10 chr2 246703999 246704301 -3983553 - AluSx SINE Alu -12 300 1 924 215 0 11 chr2 246704630 246704807 -3983047 + FAM SINE Alu 1 175 0 227 358 67 22 chr2 246705863 246705997 -3981857 - MIR3 SINE MIR -66 142 3 240 163 0 0 chr2 246706342 246706385 -3981469 + (TG)n Simple_repeat Simple_repeat 1 43 0 234 0 0 0 chr2 246707341 246707367 -3980487 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 1369 87 116 5 chr2 246710631 246710838 -3977016 - MER30 DNA MER1_type 0 230 1 307 361 71 12 chr2 246712034 246712203 -3975651 + L2 LINE L2 235 413 -2901 530 150 56 45 chr2 246712689 246712832 -3975022 - MER104 DNA Tc2 -35 145 1 2257 124 3 0 chr2 246713656 246713962 -3973892 - AluSx SINE Alu -5 307 1 2026 134 7 7 chr2 246713972 246714263 -3973591 - AluSx SINE Alu -21 291 1 364 276 208 21 chr2 246715766 246715958 -3971896 - L2 LINE L2 -1272 2042 1815 265 243 48 48 chr2 246716397 246716500 -3971354 - MIR3 SINE MIR -21 187 85 293 286 71 0 chr2 246717555 246717639 -3970215 - L2 LINE L2 -25 3247 3158 431 276 24 40 chr2 246720218 246720399 -3967455 - MIR SINE MIR -39 223 48 2587 66 0 0 chr2 246720791 246721093 -3966761 + AluSg SINE Alu 1 302 -8 2108 120 0 13 chr2 246722643 246722942 -3964912 - AluSx SINE Alu -17 295 1 2094 121 0 4 chr2 246724351 246724632 -3963222 + AluY SINE Alu 1 321 0 279 49 0 24 chr2 246724632 246724673 -3963181 + (CAAA)n Simple_repeat Simple_repeat 1 156 0 25 0 0 0 chr2 246725683 246725708 -3962146 + AT_rich Low_complexity Low_complexity 1 25 0 30 59 0 0 chr2 246725756 246725807 -3962047 + AT_rich Low_complexity Low_complexity 1 51 0 2153 114 3 0 chr2 246727989 246728295 -3959559 - AluSx SINE Alu -5 307 1 23 78 0 0 chr2 246728536 246728587 -3959267 + AT_rich Low_complexity Low_complexity 1 51 0 181 189 27 0 chr2 246729527 246729564 -3958290 + L2 LINE L2 3273 3310 -3 207 351 27 14 chr2 246731050 246731124 -3956730 - MIR SINE MIR -153 109 35 201 200 182 0 chr2 246731714 246731769 -3956085 - L2 LINE L2 0 3313 3249 1661 165 6 32 chr2 246733839 246734154 -3953700 + AluJo SINE Alu 1 307 -5 2265 107 0 0 chr2 246735262 246735572 -3952282 + AluSx SINE Alu 2 311 -1 257 255 147 10 chr2 246737313 246737415 -3950439 - L2 LINE L2 -1 3312 3197 1984 131 0 0 chr2 246739754 246740074 -3947780 - AluSx SINE Alu 0 320 1 451 224 19 0 chr2 246740887 246740994 -3946860 - L1MEc LINE L1 -4230 2166 2058 183 42 0 0 chr2 246741629 246741653 -3946201 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 180 0 0 0 chr2 246741981 246742001 -3945853 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 2132 157 22 8 chr2 246742519 246742889 -3944965 - THE1C LTR MaLR 0 375 1 271 237 0 0 chr2 246743543 246743602 -3944252 + L2 LINE L2 3223 3281 -32 333 297 212 19 chr2 246743673 246743942 -3943912 + L3 LINE CR1 1255 1575 -2 2293 86 3 3 chr2 246744001 246744351 -3943503 - AluSq SINE Alu 0 350 1 189 292 62 15 chr2 246744430 246744495 -3943359 - L2 LINE L2 -1 3271 3204 2232 88 3 0 chr2 246745840 246746134 -3941720 + AluSx SINE Alu 1 295 -17 1748 159 20 3 chr2 246747229 246747525 -3940329 + AluJb SINE Alu 1 301 -11 346 137 14 14 chr2 246747538 246747611 -3940243 + (TATG)n Simple_repeat Simple_repeat 2 74 0 2095 129 0 0 chr2 246749367 246749676 -3938178 + AluSx SINE Alu 1 309 -3 1529 194 67 30 chr2 246749968 246750329 -3937525 - MLT1A2 LTR MaLR 0 374 1 1909 184 152 7 chr2 246750458 246750899 -3936955 + MLT1D LTR MaLR 1 505 0 24 0 0 0 chr2 246751394 246751418 -3936436 + AT_rich Low_complexity Low_complexity 1 24 0 198 0 0 0 chr2 246751939 246751961 -3935893 + (TG)n Simple_repeat Simple_repeat 2 23 0 635 202 8 0 chr2 246754959 246755078 -3932776 + FLAM_C SINE Alu 1 120 -13 372 199 70 51 chr2 246755262 246755418 -3932436 - Charlie7 DNA MER1_type -1 2611 2453 226 181 325 12 chr2 246755411 246755494 -3932360 - Charlie7 DNA MER1_type -2503 109 1 * 204 163 0 0 chr2 246757125 246757168 -3930686 + GA-rich Low_complexity Low_complexity 3 45 0 2212 97 0 3 chr2 246758695 246758995 -3928859 + AluSq SINE Alu 1 299 -14 905 136 13 7 chr2 246759021 246759176 -3928678 + FRAM SINE Alu 17 172 -4 33 66 0 0 chr2 246759404 246759465 -3928389 + AT_rich Low_complexity Low_complexity 1 61 0 415 273 93 0 chr2 246759732 246759904 -3927950 + MER105 DNA DNA 13 200 -4 1675 140 32 48 chr2 246760604 246760919 -3926935 + AluJb SINE Alu 1 310 -2 338 311 50 19 chr2 246762722 246762883 -3924971 + MIR SINE MIR 87 252 -10 25 51 0 0 chr2 246763984 246764023 -3923831 + AT_rich Low_complexity Low_complexity 1 39 0 2239 85 3 0 chr2 246764227 246764521 -3923333 + AluSx SINE Alu 1 295 -17 1022 182 65 88 chr2 246764952 246765304 -3922550 - MER2 DNA MER2_type 0 344 1 2243 94 10 0 chr2 246766971 246767278 -3920576 + AluSq SINE Alu 1 310 -3 638 302 98 25 chr2 246768717 246769265 -3918589 - L2 LINE L2 -2 3270 2675 1743 153 0 23 chr2 246769265 246769573 -3918281 + AluJb SINE Alu 1 301 -11 638 302 98 25 chr2 246769573 246769635 -3918219 - L2 LINE L2 -597 2675 2619 1926 101 29 0 chr2 246769644 246769975 -3917879 - AluSq SINE Alu 0 339 1 669 292 118 26 chr2 246769984 246770599 -3917255 - L1MEd LINE L1 -3329 2800 2138 23 33 0 0 chr2 246770736 246770766 -3917088 + AT_rich Low_complexity Low_complexity 1 30 0 210 328 0 0 chr2 246770853 246770911 -3916943 + (CATATA)n Simple_repeat Simple_repeat 1 58 0 646 269 173 57 chr2 246771053 246771967 -3915887 - L1MEd LINE L1 -4647 1663 597 2075 123 7 3 chr2 246772353 246772655 -3915199 + AluSx SINE Alu 3 305 -7 2051 93 31 0 chr2 246772657 246772947 -3914907 + AluY SINE Alu 1 299 -12 442 303 49 25 chr2 246775009 246775171 -3912683 - MIR SINE MIR -56 206 41 22 56 0 0 chr2 246775313 246775349 -3912505 + AT_rich Low_complexity Low_complexity 1 36 0 787 210 13 61 chr2 246775401 246775630 -3912224 - MER20 DNA MER1_type -1 218 1 2272 83 3 13 chr2 246776740 246777041 -3910813 + AluY SINE Alu 1 298 -13 1487 118 0 30 chr2 246777085 246777221 -3910633 - THE1B LTR MaLR 0 364 225 7582 25 0 2 chr2 246777221 246778401 -3909453 - L1PA4 LINE L1 -2 6153 4973 1487 118 0 30 chr2 246778401 246778583 -3909271 - THE1B LTR MaLR -139 225 1 252 0 0 0 chr2 246778664 246778692 -3909162 + (CCA)n Simple_repeat Simple_repeat 3 30 0 22 0 0 0 chr2 246779440 246779462 -3908392 + AT_rich Low_complexity Low_complexity 1 22 0 238 257 57 143 chr2 246779620 246779865 -3907989 - L2 LINE L2 -117 3196 2973 1052 181 72 7 chr2 246779865 246780157 -3907697 - Charlie5 DNA MER1_type 0 2624 2314 762 94 0 0 chr2 246780199 246780305 -3907549 - AluSc SINE Alu -2 307 202 3551 87 9 106 chr2 246780307 246780959 -3906895 + LTR14B LTR ERVK 20 608 0 1598 101 5 0 chr2 246780959 246781166 -3906688 - AluSc SINE Alu -101 208 1 6242 165 57 33 chr2 246781166 246781793 -3906061 - Charlie5 DNA MER1_type -397 2227 1616 1905 145 0 24 chr2 246781793 246782090 -3905764 - AluJo SINE Alu -22 290 1 6242 165 57 33 chr2 246782090 246782810 -3905044 - Charlie5 DNA MER1_type -1008 1616 841 1694 172 10 7 chr2 246782810 246783101 -3904753 + AluJb SINE Alu 2 293 -19 6242 165 57 33 chr2 246783101 246783203 -3904651 - Charlie5 DNA MER1_type -1783 841 743 1045 199 155 27 chr2 246783205 246783541 -3904313 - MLT1F1 LTR MaLR -10 557 179 242 259 0 0 chr2 246783541 246783599 -3904255 + GA-rich Low_complexity Low_complexity 1 58 0 338 226 12 12 chr2 246783660 246783744 -3904110 - MLT1F1 LTR MaLR -483 84 1 2295 187 40 26 chr2 246783745 246784323 -3903531 - Charlie5 DNA MER1_type -1868 744 159 257 307 11 11 chr2 246784325 246784413 -3903441 - L2 LINE L2 -940 2374 2287 1033 170 0 0 chr2 246784478 246784637 -3903217 + AluSg/x SINE Alu 139 297 -13 372 301 92 22 chr2 246784776 246785005 -3902849 - L2 LINE L2 -1034 2280 2036 222 295 16 0 chr2 246785422 246785483 -3902371 - MIR SINE MIR -74 188 127 811 128 182 0 chr2 246785483 246785631 -3902223 + AluJo SINE Alu 122 296 -16 274 280 97 0 chr2 246785714 246785807 -3902047 + L2 LINE L2 3147 3248 -24 2205 82 64 0 chr2 246787167 246787447 -3900407 + AluY SINE Alu 1 298 -13 2304 66 3 14 chr2 246787638 246787949 -3899905 - AluY SINE Alu 0 308 1 715 169 39 79 chr2 246788016 246788194 -3899660 - FRAM SINE Alu -8 168 1 181 296 0 0 chr2 246788571 246788615 -3899239 + L2 LINE L2 3224 3267 -5 2043 123 33 7 chr2 246788903 246789203 -3898651 + AluSx SINE Alu 1 308 -4 2559 43 0 3 chr2 246789292 246789594 -3898260 - AluY SINE Alu -10 301 1 2047 96 11 4 chr2 246789816 246790123 -3897731 + AluSx SINE Alu 1 309 0 219 278 44 67 chr2 246790464 246790554 -3897300 + L3 LINE CR1 1232 1319 -258 243 0 0 0 chr2 246791123 246791150 -3896704 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 1050 150 204 54 chr2 246791402 246791486 -3896368 - MER96B DNA MER1_type? -55 362 292 189 0 0 0 chr2 246791486 246791507 -3896347 + (TTTAA)n Simple_repeat Simple_repeat 2 22 0 2093 101 0 24 chr2 246791507 246791804 -3896050 - AluSx SINE Alu -22 290 1 1050 150 204 54 chr2 246791804 246792031 -3895823 - MER96B DNA MER1_type? -124 293 3 936 67 0 93 chr2 246793171 246793321 -3894533 - AluY SINE Alu -175 136 1 278 303 59 53 chr2 246793380 246793532 -3894322 - L2 LINE L2 -484 2830 2678 1785 152 63 8 chr2 246793702 246794115 -3893739 - L1M4 LINE L1 -522 5652 5220 426 173 127 77 chr2 246794257 246794443 -3893411 + Charlie1 DNA MER1_type 2500 2700 -61 2193 103 28 0 chr2 246794443 246794734 -3893120 - AluSq SINE Alu -14 299 1 426 173 127 77 chr2 246794734 246794767 -3893087 + Charlie1 DNA MER1_type 2700 2730 -31 1280 198 54 29 chr2 246794769 246795047 -3892807 + AluJb SINE Alu 1 285 -27 1507 151 0 8 chr2 246795104 246795342 -3892512 - AluJb SINE Alu -76 236 1 191 280 11 97 chr2 246795411 246795504 -3892350 + L2 LINE L2 2926 3010 -262 287 298 53 21 chr2 246795809 246795903 -3891951 + L2 LINE L2 2977 3073 -199 1489 121 0 44 chr2 246795986 246796234 -3891620 + MER1B DNA MER1_type 103 339 0 194 232 36 36 chr2 246796273 246796329 -3891525 + MER5A DNA MER1_type 128 183 -6 674 233 52 0 chr2 246796528 246796700 -3891154 - L1ME LINE L1 -521 5641 5461 2044 117 0 0 chr2 246796700 246796974 -3890880 + AluSx SINE Alu 1 274 -38 249 187 0 0 chr2 246797018 246797093 -3890761 + (CA)n Simple_repeat Simple_repeat 2 76 0 535 108 24 9 chr2 246797093 246797200 -3890654 - L1ME LINE L1 -695 5475 5366 715 265 83 18 chr2 246797208 246797587 -3890267 - L1ME LINE L1 -860 5286 4903 2058 105 63 0 chr2 246797600 246797885 -3889969 - AluSx SINE Alu -9 303 1 3240 124 34 14 chr2 246797887 246798589 -3889265 - L1P4 LINE L1 -383 5783 5072 2913 201 16 1 chr2 246798583 246799250 -3888604 + L1 LINE L1 4012 4688 -1458 * 700 187 0 108 chr2 246799250 246799398 -3888456 + L1P LINE L1 4886 5006 -1140 1861 144 0 52 chr2 246799398 246799725 -3888129 + AluJo SINE Alu 1 310 -2 700 187 0 108 chr2 246799725 246799790 -3888064 + L1P LINE L1 5006 5076 -1070 502 255 96 30 chr2 246799794 246800159 -3887695 - L1ME LINE L1 -2697 3449 3061 658 297 26 23 chr2 246800183 246800449 -3887405 + L1MEc LINE L1 153 419 -5977 2110 119 3 3 chr2 246800879 246801164 -3886690 - AluSx SINE Alu -27 285 1 375 299 75 51 chr2 246801548 246801886 -3885968 + L1MEc LINE L1 647 1006 -5199 1919 133 12 49 chr2 246801886 246802210 -3885644 + AluJb SINE Alu 1 312 0 375 299 75 51 chr2 246802210 246802442 -3885412 + L1MEc LINE L1 1006 1231 -4974 245 278 165 43 chr2 246802459 246802861 -3884993 - L1ME LINE L1 -250 5871 5412 348 291 165 0 chr2 246803070 246803197 -3884657 + L2 LINE L2 1706 1853 -1461 839 255 23 14 chr2 246803221 246803437 -3884417 + L2 LINE L2 2035 2252 -1062 350 197 0 0 chr2 246803442 246803508 -3884346 - MER33 DNA MER1_type 0 324 259 987 149 6 19 chr2 246803509 246803670 -3884184 + FRAM SINE Alu 9 167 -9 920 148 133 0 chr2 246803739 246803949 -3883905 - MER33 DNA MER1_type -65 259 22 226 200 0 0 chr2 246803986 246804031 -3883823 + L2 LINE L2 2298 2342 -972 357 313 23 23 chr2 246804031 246804159 -3883695 + L2 LINE L2 2473 2600 -714 190 360 40 0 chr2 246804167 246804242 -3883612 + L2 LINE L2 2975 3052 -261 3119 161 70 12 chr2 246804242 246804827 -3883027 - LTR31 LTR ERV1 0 619 1 1702 182 14 3 chr2 246804988 246805285 -3882569 - AluJb SINE Alu -12 300 1 493 270 98 53 chr2 246805516 246805584 -3882270 - L1M4 LINE L1 -2842 3304 3241 1907 143 17 3 chr2 246805584 246805871 -3881983 - AluSx SINE Alu -21 291 1 493 270 98 53 chr2 246805871 246806158 -3881696 - L1M4 LINE L1 -2905 3241 2933 222 222 93 19 chr2 246806165 246806219 -3881635 - MIR SINE MIR -164 98 41 473 137 105 0 chr2 246806586 246806681 -3881173 + L1MA4 LINE L1 6190 6294 -6 921 255 58 21 chr2 246806730 246807056 -3880798 - L1MB8 LINE L1 -62 6116 5779 300 303 169 6 chr2 246807883 246808061 -3879793 + L1MEc LINE L1 2274 2480 -3735 440 324 94 62 chr2 246808184 246808782 -3879072 + L1M4 LINE L1 4591 5207 -939 403 169 108 24 chr2 246808783 246808866 -3878988 + FLAM_A SINE Alu 32 121 -21 307 231 0 83 chr2 246808875 246808983 -3878871 + L1M4 LINE L1 5191 5289 -857 215 207 18 183 chr2 246808989 246809153 -3878701 + L2 LINE L2 2271 2407 -907 525 220 99 72 chr2 246809242 246809465 -3878389 - MER112 DNA MER1_type -31 229 1 192 371 29 19 chr2 246809622 246809727 -3878127 + L2 LINE L2 2701 2806 -508 252 330 98 40 chr2 246809934 246810107 -3877747 + L2 LINE L2 3086 3268 -4 371 308 47 76 chr2 246810108 246810209 -3877645 + L3 LINE CR1 1367 1460 -117 1463 206 59 8 chr2 246810209 246810564 -3877290 - MLT1A2 LTR MaLR 0 374 2 371 308 47 76 chr2 246810564 246810673 -3877181 + L3 LINE CR1 1460 1571 -6 21 36 0 0 chr2 246812447 246812475 -3875379 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 246812583 246812613 -3875241 + AT_rich Low_complexity Low_complexity 1 30 0 186 213 43 21 chr2 246812759 246812806 -3875048 - MIR3 SINE MIR -13 195 148 1211 172 18 32 chr2 246814481 246814702 -3873152 + AluJo SINE Alu 1 218 -94 1335 120 39 0 chr2 246815209 246815442 -3872412 - L1MA4A LINE L1 -5 6298 6057 401 204 56 0 chr2 246815745 246815853 -3872001 + MER94 DNA DNA 1 114 -20 229 301 148 0 chr2 246816595 246816778 -3871076 + MER113 DNA MER1_type? 2 211 -310 209 132 26 0 chr2 246816815 246816853 -3871001 + (TA)n Simple_repeat Simple_repeat 2 40 0 263 318 180 43 chr2 246816917 246817128 -3870726 + MIR SINE MIR 23 262 0 26 0 0 0 chr2 246818761 246818787 -3869067 + AT_rich Low_complexity Low_complexity 1 26 0 1887 126 61 3 chr2 246818928 246819221 -3868633 - AluSx SINE Alu -2 310 1 433 287 67 38 chr2 246819244 246819453 -3868401 + L2 LINE L2 3098 3312 -1 615 266 128 5 chr2 246819663 246819851 -3868003 + MIR SINE MIR 44 254 -8 35 24 0 0 chr2 246819858 246819900 -3867954 + AT_rich Low_complexity Low_complexity 1 42 0 200 214 71 0 chr2 246819959 246820001 -3867853 - L2 LINE L2 -4 3309 3265 1188 127 118 5 chr2 246820410 246820631 -3867223 - MER2 DNA MER2_type -41 304 59 210 239 134 30 chr2 246820718 246820785 -3867069 - MIR3 SINE MIR -24 184 111 229 350 73 24 chr2 246821233 246821356 -3866498 - L2 LINE L2 -5 3267 3139 912 288 25 8 chr2 246821500 246821743 -3866111 + MIR SINE MIR 3 249 -13 329 331 78 7 chr2 246822478 246822632 -3865222 - L1M4 LINE L1 -1072 5074 4910 194 363 16 57 chr2 246823571 246823695 -3864159 + L2 LINE L2 3119 3237 -35 554 258 47 0 chr2 246823721 246823999 -3863855 - L1ME1 LINE L1 -21 6145 5809 785 198 55 51 chr2 246824003 246824693 -3863161 - L1ME1 LINE L1 -818 5328 4571 1931 146 0 7 chr2 246824972 246825298 -3862556 - AluSx SINE Alu 0 324 1 204 286 161 23 chr2 246825309 246825526 -3862328 + L2 LINE L2 1764 2010 -1304 2117 125 7 3 chr2 246825872 246826169 -3861685 - AluJo SINE Alu -14 298 1 683 293 42 9 chr2 246826509 246826724 -3861130 + MIR SINE MIR 41 262 0 563 267 45 11 chr2 246826806 246826982 -3860872 - L2 LINE L2 -1 3312 3131 1022 146 57 10 chr2 246827274 246827466 -3860388 + MER105 DNA DNA 2 202 -2 32 26 0 0 chr2 246827600 246827639 -3860215 + AT_rich Low_complexity Low_complexity 1 39 0 33 66 0 0 chr2 246828213 246828274 -3859580 + AT_rich Low_complexity Low_complexity 1 61 0 1583 233 85 0 chr2 246828287 246828664 -3859190 - MLT1F LTR MaLR -3 539 131 * 4259 136 39 46 chr2 246828659 246829483 -3858371 + Tigger1 DNA MER2_type 41 858 -1560 745 86 8 55 chr2 246829493 246829621 -3858233 - L1PB1 LINE L1 -70 6081 5960 2512 127 25 0 chr2 246829621 246830014 -3857840 + Tigger1 DNA MER2_type 847 1249 -1169 1634 151 9 91 chr2 246830017 246830215 -3857639 - AluJo SINE Alu -8 304 142 2630 57 0 0 chr2 246830215 246830514 -3857340 + AluSc SINE Alu 1 299 -10 1634 151 9 91 chr2 246830514 246830646 -3857208 - AluJo SINE Alu -170 142 1 708 200 47 53 chr2 246830651 246830821 -3857033 - AluJo SINE Alu -78 234 66 4341 85 9 182 chr2 246830824 246831383 -3856471 + Tigger1 DNA MER2_type 1275 1747 -671 878 163 7 0 chr2 246831383 246831524 -3856330 - FLAM_C SINE Alu -1 142 1 4341 85 9 182 chr2 246831524 246831835 -3856019 + Tigger1 DNA MER2_type 1747 2110 -308 249 314 48 33 chr2 246831982 246832192 -3855662 + L1MEc LINE L1 1594 1806 -4590 3051 167 44 11 chr2 246832347 246832891 -3854963 - MER68 LTR ERV1 0 562 1 2302 84 17 3 chr2 246832988 246833284 -3854570 - AluSc SINE Alu -9 300 1 1184 233 41 0 chr2 246833308 246833626 -3854228 + L1M4 LINE L1 4938 5268 -878 1807 167 24 0 chr2 246833638 246833926 -3853928 + AluJb SINE Alu 11 305 -7 5956 112 18 11 chr2 246833937 246835306 -3852548 + L1PA15 LINE L1 4793 6162 -3 444 309 55 12 chr2 246835353 246835518 -3852336 + L1M4 LINE L1 4272 4443 -1703 40 37 0 0 chr2 246835738 246835792 -3852062 + AT_rich Low_complexity Low_complexity 1 54 0 3494 113 41 2 chr2 246836610 246837177 -3850677 - L1MA5A LINE L1 -2 6295 5707 39478 66 9 2 chr2 246837185 246843285 -3844569 - L1PA5 LINE L1 -5 6149 4 333 0 0 0 chr2 246843510 246843547 -3844307 + (TAA)n Simple_repeat Simple_repeat 1 37 0 23 68 0 0 chr2 246843616 246843660 -3844194 + AT_rich Low_complexity Low_complexity 1 44 0 2264 82 0 4 chr2 246843913 246844193 -3843661 + AluSg SINE Alu 3 281 -29 1280 190 107 63 chr2 246844227 246844658 -3843196 - LTR7 LTR ERV1 0 450 1 1148 228 81 53 chr2 246845362 246845757 -3842097 + MLT1D LTR MaLR 5 410 -95 2078 109 0 64 chr2 246845757 246845916 -3841938 - AluSx SINE Alu -20 292 161 2207 110 17 0 chr2 246845916 246846208 -3841646 - AluSx SINE Alu 0 312 16 2078 109 0 64 chr2 246846208 246846360 -3841494 - AluSx SINE Alu -151 161 1 4452 229 78 46 chr2 246847420 246848942 -3838912 - L1MC4a LINE L1 -7 7801 6231 342 277 56 43 chr2 246849699 246849802 -3838052 - L1MEc LINE L1 -4663 1586 1486 1520 148 141 7 chr2 246849802 246850099 -3837755 - MER1B DNA MER1_type 0 337 1 342 277 56 43 chr2 246850099 246850220 -3837634 - L1MEc LINE L1 -4763 1486 1319 599 268 58 22 chr2 246850386 246850610 -3837244 - L1MEc LINE L1 -5671 725 494 1028 216 202 9 chr2 246850633 246850980 -3836874 - L1MEc LINE L1 -5973 423 10 195 196 130 0 chr2 246851946 246851992 -3835862 + L2 LINE L2 3220 3271 -1 213 125 0 25 chr2 246853263 246853303 -3834551 + (CCCCCG)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr2 246853314 246853336 -3834518 + GC_rich Low_complexity Low_complexity 1 22 0 203 196 0 20 chr2 246853501 246853552 -3834302 + G-rich Low_complexity Low_complexity 5 54 0 2340 103 0 10 chr2 246855281 246855581 -3832273 + AluSq SINE Alu 1 297 -16 236 256 51 0 chr2 246858386 246858464 -3829390 + MER20 DNA MER1_type 138 219 0 677 139 0 15 chr2 246858956 246859093 -3828761 + (GGGGA)n Simple_repeat Simple_repeat 2 136 0 466 241 167 0 chr2 246859115 246859277 -3828577 - MER53 DNA DNA 0 189 1 1234 137 26 40 chr2 246860265 246860439 -3827415 - Tigger2a DNA MER2_type -2278 440 268 2137 134 3 0 chr2 246860439 246860744 -3827110 - AluSq SINE Alu -7 306 1 1234 137 26 40 chr2 246860744 246860796 -3827058 - Tigger2a DNA MER2_type -2450 268 217 851 224 0 6 chr2 246860796 246860957 -3826897 + AluSg/x SINE Alu 128 287 -23 754 127 99 55 chr2 246860962 246861143 -3826711 - Tigger2a DNA MER2_type -243 191 3 2253 121 3 0 chr2 246861753 246862059 -3825795 - AluSx SINE Alu -5 307 1 201 39 0 0 chr2 246862293 246862319 -3825535 + (A)n Simple_repeat Simple_repeat 1 26 0 3186 161 66 14 chr2 246862981 246863604 -3824250 - L1MB3 LINE L1 -3 6180 5526 296 185 62 0 chr2 246863710 246863775 -3824079 - L1MB3 LINE L1 -667 5516 5448 561 194 0 0 chr2 246865493 246865596 -3822258 + AluJb SINE Alu 200 302 -10 484 175 10 0 chr2 246865607 246865704 -3822150 + L1MB8 LINE L1 6070 6167 -11 338 313 0 0 chr2 246866314 246866410 -3821444 + MIR SINE MIR 26 121 -141 1841 155 24 10 chr2 246866459 246866755 -3821099 + AluJb SINE Alu 1 300 -12 320 289 16 0 chr2 246868130 246868251 -3819603 + LTR67 LTR ERVL 431 553 -4 257 278 43 35 chr2 246869691 246869806 -3818048 + MIR SINE MIR 68 183 -79 24 0 0 0 chr2 246873195 246873219 -3814635 + AT_rich Low_complexity Low_complexity 1 24 0 602 39 26 0 chr2 246873236 246873314 -3814540 + L1PA5 LINE L1 6075 6154 0 2464 89 0 0 chr2 246873318 246873622 -3814232 + AluSx SINE Alu 1 304 -8 355 225 83 71 chr2 246873716 246873885 -3813969 + MLT1D LTR MaLR 8 178 -327 1263 154 9 13 chr2 246873890 246874117 -3813737 - L1MC4a LINE L1 -907 6901 6676 1158 178 80 15 chr2 246874273 246874537 -3813317 - MLT2C1 LTR ERVL -116 281 1 2166 258 63 34 chr2 246874538 246875391 -3812463 - L1MC4a LINE L1 -1668 6140 5263 338 330 79 49 chr2 246875396 246875663 -3812191 - L1MC4a LINE L1 -889 5257 4983 235 299 47 16 chr2 246875665 246875792 -3812062 - L1MC4a LINE L1 -1156 4990 4860 1910 182 0 3 chr2 246877144 246877457 -3810397 + AluJb SINE Alu 1 312 0 216 0 0 0 chr2 246877523 246877547 -3810307 + (T)n Simple_repeat Simple_repeat 1 24 0 1439 167 91 0 chr2 246881268 246881532 -3806322 + AluJb SINE Alu 2 289 -13 2269 94 14 3 chr2 246881673 246881961 -3805893 - AluSx SINE Alu -21 291 1 381 309 77 15 chr2 246881964 246882198 -3805656 - L1MC/D LINE L1 -523 5598 5352 612 25 38 0 chr2 246882265 246882345 -3805509 - L1MC1 LINE L1 0 6333 6251 2257 97 27 3 chr2 246882376 246882675 -3805179 - AluSx SINE Alu -6 306 1 1419 137 10 0 chr2 246883310 246883514 -3804340 - AluJo SINE Alu -84 228 23 2303 108 0 0 chr2 246883815 246884112 -3803742 - AluJb SINE Alu -15 297 1 1057 324 126 53 chr2 246884113 246884746 -3803108 - L1MC/D LINE L1 -2548 3598 3013 2577 60 0 10 chr2 246884746 246885060 -3802794 - AluY SINE Alu 0 311 1 1057 324 126 53 chr2 246885060 246885727 -3802127 - L1MC/D LINE L1 -3133 3013 2203 1952 134 69 3 chr2 246885879 246886170 -3801684 - AluJo SINE Alu -2 310 1 230 116 23 0 chr2 246886346 246886389 -3801465 + CT-rich Low_complexity Low_complexity 1 44 0 357 340 36 50 chr2 246886625 246886928 -3800926 - HAL1b LINE L1 -703 645 347 1495 121 5 0 chr2 246887267 246887466 -3800388 + AluSx SINE Alu 1 200 -112 4406 176 51 14 chr2 246889059 246890668 -3797186 - L1MB8 LINE L1 -177 6001 4328 2445 129 20 56 chr2 246890668 246891028 -3796826 + Tigger2a DNA MER2_type 2 344 -2364 2080 131 7 10 chr2 246891028 246891325 -3796529 + AluSx SINE Alu 1 296 -16 2445 129 20 56 chr2 246891325 246891413 -3796441 + Tigger2a DNA MER2_type 344 434 0 4406 176 51 14 chr2 246891413 246891426 -3796428 - L1MB8 LINE L1 -1850 4328 4317 35 0 0 0 chr2 246891529 246891564 -3796290 + AT_rich Low_complexity Low_complexity 1 35 0 2257 109 3 0 chr2 246891678 246891982 -3795872 - AluSx SINE Alu -7 305 1 1017 121 0 14 chr2 246892495 246892636 -3795218 - AluSq/x SINE Alu -174 139 1 1142 164 40 4 chr2 246892649 246892875 -3794979 + L1M4 LINE L1 4962 5195 -951 376 341 35 28 chr2 246892919 246893203 -3794651 + AluSc SINE Alu 1 286 -13 243 0 0 0 chr2 246893220 246893247 -3794607 + (TA)n Simple_repeat Simple_repeat 2 28 0 1860 159 14 6 chr2 246893248 246893601 -3794253 + L1MC3 LINE L1 7429 7784 -1 2612 153 32 36 chr2 246894415 246894869 -3792985 - LOR1a LTR ERV1 0 497 43 180 77 0 0 chr2 246894869 246894895 -3792959 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 1729 123 60 37 chr2 246894899 246895168 -3792686 - AluSx SINE Alu -37 275 1 2612 153 32 36 chr2 246895168 246895206 -3792648 - LOR1a LTR ERV1 -457 40 2 1878 145 0 74 chr2 246895606 246895790 -3792064 - AluSx SINE Alu -11 301 150 2514 65 3 10 chr2 246895790 246896097 -3791757 - AluY SINE Alu -6 305 1 1878 145 0 74 chr2 246896097 246896237 -3791617 - AluSx SINE Alu -162 150 1 247 258 21 43 chr2 246896606 246896699 -3791155 - MLT1E LTR MaLR -87 537 447 2519 149 130 9 chr2 246896707 246897241 -3790613 + LTR28 LTR ERV1 10 1251 -444 945 244 57 35 chr2 246897319 246897602 -3790252 - MLT1E LTR MaLR -262 331 43 252 180 82 0 chr2 246897828 246897889 -3789965 - MER91B DNA MER1_type -122 68 3 2283 98 3 0 chr2 246898405 246898717 -3789137 + AluSx SINE Alu 1 313 0 889 201 45 96 chr2 246898757 246898798 -3789056 + L1M4 LINE L1 2697 2739 -3407 1434 94 40 13 chr2 246898798 246898897 -3788957 - MER30 DNA MER1_type 0 230 135 1897 124 4 0 chr2 246898897 246899169 -3788685 + AluSx SINE Alu 35 307 0 1434 94 40 13 chr2 246899169 246899292 -3788562 - MER30 DNA MER1_type -95 135 1 889 201 45 96 chr2 246899292 246899518 -3788336 + L1M4 LINE L1 2739 2946 -3200 2363 103 0 3 chr2 246899518 246899820 -3788034 + AluSg SINE Alu 1 301 -9 889 201 45 96 chr2 246899820 246899885 -3787969 + L1M4 LINE L1 2946 3013 -3133 295 253 95 11 chr2 246900263 246900358 -3787496 - MIR SINE MIR -70 192 90 656 193 0 7 chr2 246901379 246901524 -3786330 + (TG)n Simple_repeat Simple_repeat 2 145 0 2164 86 0 18 chr2 246902056 246902335 -3785519 + AluSx SINE Alu 1 274 -38 204 40 0 0 chr2 246902337 246902362 -3785492 + (GGGGA)n Simple_repeat Simple_repeat 5 29 0 254 332 78 5 chr2 246902597 246902814 -3785040 - LTR16B LTR ERVL -190 274 42 556 239 173 31 chr2 246902826 246903081 -3784773 + MLT1C LTR MaLR 64 354 -113 270 0 0 0 chr2 246903594 246903624 -3784230 + (TG)n Simple_repeat Simple_repeat 2 31 0 2385 95 3 13 chr2 246903653 246903968 -3783886 - AluSx SINE Alu 0 312 1 747 246 65 4 chr2 246904446 246904469 -3783385 + L1ME LINE L1 5532 5552 -569 1916 111 7 38 chr2 246904469 246904758 -3783096 + AluSx SINE Alu 1 280 -32 657 47 0 0 chr2 246904758 246904843 -3783011 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 747 246 65 4 chr2 246904843 246905057 -3782797 + L1ME LINE L1 5551 5778 -343 2156 109 0 35 chr2 246905193 246905505 -3782349 - AluSx SINE Alu -11 301 1 2305 109 10 0 chr2 246905784 246906087 -3781767 - AluSx SINE Alu -5 307 2 200 313 16 0 chr2 246906088 246906152 -3781702 + MIR SINE MIR 51 115 -147 1812 171 3 7 chr2 246906879 246907171 -3780683 + AluJb SINE Alu 1 291 -21 23 68 0 0 chr2 246907197 246907241 -3780613 + AT_rich Low_complexity Low_complexity 1 44 0 253 291 8 77 chr2 246907259 246907321 -3780533 + MIR SINE MIR 34 86 -176 1958 129 35 29 chr2 246907321 246907631 -3780223 + AluJb SINE Alu 1 312 0 253 291 8 77 chr2 246907631 246907685 -3780169 + MIR SINE MIR 86 142 -120 1716 161 45 32 chr2 246907987 246908180 -3779674 - MLT1B LTR MaLR -1 364 183 2272 125 0 0 chr2 246908180 246908477 -3779377 - AluSx SINE Alu -15 297 1 1716 161 45 32 chr2 246908477 246908656 -3779198 - MLT1B LTR MaLR -182 183 8 691 157 0 0 chr2 246909161 246909269 -3778585 + AluSq/x SINE Alu 18 125 -188 358 294 25 0 chr2 246909424 246909543 -3778311 - MIR SINE MIR -113 149 28 895 92 7 7 chr2 246910856 246910997 -3776857 + (TTTTC)n Simple_repeat Simple_repeat 2 142 0 2077 100 16 29 chr2 246911229 246911539 -3776315 + AluSg SINE Alu 1 306 -4 1391 141 5 0 chr2 246911677 246911869 -3775985 + AluSx SINE Alu 2 194 -118 2035 104 24 3 chr2 246912123 246912410 -3775444 - AluSq SINE Alu -20 293 1 1335 270 106 50 chr2 246912429 246913257 -3774597 + L2 LINE L2 2381 3257 -15 1747 167 7 14 chr2 246913257 246913544 -3774310 + AluJb SINE Alu 8 292 -20 1335 270 106 50 chr2 246913544 246913561 -3774293 + L2 LINE L2 3257 3272 0 1908 158 0 29 chr2 246913670 246913986 -3773868 + AluJo SINE Alu 1 307 -5 2350 166 29 23 chr2 246914300 246914782 -3773072 + MER31A LTR ERV1 1 485 0 2152 129 3 3 chr2 246914904 246915214 -3772640 + AluSx SINE Alu 3 312 0 2285 100 21 0 chr2 246915407 246915698 -3772156 + AluSx SINE Alu 1 297 -15 2362 90 3 7 chr2 246915699 246915998 -3771856 + AluY SINE Alu 1 298 -13 1933 241 29 25 chr2 246916002 246916595 -3771259 + L1M4 LINE L1 3741 4335 -1811 314 147 0 73 chr2 246916603 246916671 -3771183 + L1MC3 LINE L1 6156 6218 -1567 2324 80 17 13 chr2 246916700 246916999 -3770855 + AluY SINE Alu 5 304 -7 606 262 67 0 chr2 246917004 246917168 -3770686 + FAM SINE Alu 1 175 0 1934 120 29 6 chr2 246917168 246917185 -3770669 - MER4D LTR ERV1 -579 324 309 2134 127 0 0 chr2 246917185 246917469 -3770385 + AluSx SINE Alu 1 284 -28 237 83 0 0 chr2 246917469 246917505 -3770349 + (TA)n Simple_repeat Simple_repeat 2 37 0 1934 120 29 6 chr2 246917505 246917802 -3770052 - MER4D LTR ERV1 -593 310 2 1889 160 45 70 chr2 246917808 246918252 -3769602 + L1MC3 LINE L1 6213 6645 -1140 1348 167 29 46 chr2 246918252 246918279 -3769575 - Tigger3(Golem) DNA MER2_type 0 3038 3012 3874 98 25 0 chr2 246918279 246918680 -3769174 - MER61E LTR ERV1 -4 565 145 2094 84 4 0 chr2 246918680 246918943 -3768911 - AluSp SINE Alu 0 313 50 3874 98 25 0 chr2 246918943 246919092 -3768762 - MER61E LTR ERV1 -424 145 1 1348 167 29 46 chr2 246919092 246919345 -3768509 - Tigger3(Golem) DNA MER2_type -26 3012 2763 1377 181 145 21 chr2 246919362 246919749 -3768105 - LTR47A LTR ERVL -17 435 1 397 228 0 0 chr2 246919749 246919825 -3768029 - Tigger3(Golem) DNA MER2_type -2952 77 2 411 233 8 75 chr2 246919826 246919876 -3767978 + L1MC3 LINE L1 6644 6696 -1089 584 217 9 9 chr2 246919876 246919991 -3767863 + FLAM_A SINE Alu 1 115 -18 603 117 0 0 chr2 246919993 246920087 -3767767 + (CA)n Simple_repeat Simple_repeat 2 95 0 411 233 8 75 chr2 246920087 246920153 -3767701 + L1MC3 LINE L1 6697 6755 -1030 2190 122 7 3 chr2 246920331 246920635 -3767219 - AluSx SINE Alu -7 305 1 1891 175 0 10 chr2 246923007 246923310 -3764544 - AluJo SINE Alu -12 300 1 2241 108 0 34 chr2 246924111 246924148 -3763706 - AluSx SINE Alu 0 312 275 194 0 39 0 chr2 246924148 246924174 -3763680 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2241 108 0 34 chr2 246924174 246924459 -3763395 - AluSx SINE Alu -37 275 1 2274 97 3 3 chr2 246925433 246925731 -3762123 - AluSx SINE Alu -14 298 1 427 300 139 52 chr2 246925743 246926010 -3761844 - L1MCc LINE L1 -2145 4796 4507 932 72 0 86 chr2 246926155 246926294 -3761560 + FLAM_C SINE Alu 9 135 -8 1975 154 0 3 chr2 246926486 246926821 -3761033 - AluSx SINE Alu 0 312 1 636 333 60 27 chr2 246926871 246927237 -3760617 - L1MCc LINE L1 -3042 3899 3522 455 242 73 0 chr2 246927799 246927923 -3759931 - L2 LINE L2 -220 3052 2920 257 198 13 38 chr2 246928653 246928810 -3759044 + GA-rich Low_complexity Low_complexity 1 153 0 808 98 0 0 chr2 246929402 246929504 -3758350 - FLAM_C SINE Alu -26 117 16 676 260 41 29 chr2 246929629 246929875 -3757979 - L1ME LINE L1 -381 5740 5492 1773 147 10 36 chr2 246929880 246930053 -3757801 - AluJo SINE Alu -13 299 136 1645 99 0 0 chr2 246930053 246930266 -3757588 - AluY SINE Alu -10 301 89 1773 147 10 36 chr2 246930266 246930399 -3757455 - AluJo SINE Alu -176 136 1 2365 88 0 19 chr2 246930492 246930809 -3757045 + AluY SINE Alu 1 311 0 1102 162 0 0 chr2 246930815 246930982 -3756872 + AluSg/x SINE Alu 128 294 -16 264 305 74 0 chr2 246931133 246931228 -3756626 - MIR SINE MIR -62 146 45 2592 263 116 41 chr2 246932575 246932766 -3755088 - L1MCc LINE L1 -4475 2466 2291 2446 98 7 0 chr2 246932766 246933071 -3754783 - AluSx SINE Alu -5 307 1 2592 263 116 41 chr2 246933071 246934459 -3753395 - L1MCc LINE L1 -4650 2291 1008 261 0 0 0 chr2 246934459 246934488 -3753366 + (TGG)n Simple_repeat Simple_repeat 1 29 0 2140 94 0 40 chr2 246934488 246934785 -3753069 - AluSg SINE Alu -25 285 1 2592 263 116 41 chr2 246934785 246935021 -3752833 - L1MCc LINE L1 -5932 1009 484 444 235 0 37 chr2 246936259 246936446 -3751408 + (CA)n Simple_repeat Simple_repeat 1 180 0 327 291 0 11 chr2 246936524 246936706 -3751148 + (CA)n Simple_repeat Simple_repeat 1 180 0 320 290 0 17 chr2 246936895 246937071 -3750783 + (CA)n Simple_repeat Simple_repeat 2 174 0 272 203 304 0 chr2 246937225 246937304 -3750550 - L1M4 LINE L1 -6163 379 277 2271 178 36 28 chr2 246937328 246937857 -3749997 - MER89 LTR ERV1 -25 534 2 2099 112 29 0 chr2 246937859 246938137 -3749717 - AluSx SINE Alu -21 291 6 752 264 26 53 chr2 246938146 246938411 -3749443 - L1M4 LINE L1 -6283 259 2 820 123 0 43 chr2 246938425 246938563 -3749291 - FLAM_C SINE Alu 0 133 2 518 125 0 23 chr2 246938720 246938808 -3749046 - LTR23 LTR ERV1 -32 405 320 7292 173 118 51 chr2 246939047 246940692 -3747162 + MER52A LTR ERV1 1 1755 0 1686 201 13 0 chr2 246941638 246941946 -3745908 + AluJb SINE Alu 1 312 0 670 158 12 38 chr2 246941947 246942208 -3745646 + GA-rich Low_complexity Low_complexity 1 254 0 1245 125 129 3 chr2 246942236 246942473 -3745381 - MLT1D LTR MaLR 0 505 252 303 93 0 0 chr2 246942479 246942522 -3745332 + (TCCC)n Simple_repeat Simple_repeat 1 43 0 1231 182 72 41 chr2 246942524 246942815 -3745039 - AluJo SINE Alu -2 300 1 294 267 12 0 chr2 246942861 246942947 -3744907 + MER34 LTR ERV1 13 99 -443 609 253 34 59 chr2 246943111 246943226 -3744628 + MER34B LTR ERV1 271 378 -187 2437 104 0 0 chr2 246943226 246943533 -3744321 - AluSx SINE Alu -5 307 1 609 253 34 59 chr2 246943533 246943654 -3744200 + MER34B LTR ERV1 378 501 -64 2501 75 3 0 chr2 246943731 246944037 -3743817 - AluY SINE Alu -4 307 1 1178 126 11 5 chr2 246944037 246944227 -3743627 - MLT1D LTR MaLR -314 191 1 2115 124 31 0 chr2 246944385 246944675 -3743179 + AluSx SINE Alu 1 299 -13 1953 130 71 11 chr2 246944731 246945085 -3742769 + THE1C LTR MaLR 1 375 0 1948 124 36 4 chr2 246945245 246945554 -3742300 - AluSx SINE Alu 0 318 1 1726 164 0 8 chr2 246945730 246945998 -3741856 + AluJb SINE Alu 1 266 -46 480 133 0 0 chr2 246945998 246946073 -3741781 + MSTA LTR MaLR 352 426 -2 1888 188 0 3 chr2 246946092 246946400 -3741454 + AluJb SINE Alu 5 311 -1 1794 164 47 3 chr2 246946405 246946704 -3741150 + AluJb SINE Alu 1 312 0 1460 177 63 0 chr2 246946713 246946967 -3740887 + AluJb SINE Alu 40 309 -3 725 126 7 20 chr2 246946993 246947144 -3740710 + (GAAA)n Simple_repeat Simple_repeat 4 152 0 2152 102 0 0 chr2 246947172 246947436 -3740418 + AluSx SINE Alu 12 275 -37 233 0 62 0 chr2 246947440 246947472 -3740382 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 873 280 57 11 chr2 246947525 246947926 -3739928 + L1ME LINE L1 5237 5659 -503 467 167 44 0 chr2 246947938 246948028 -3739826 - MER84 LTR ERVI 0 507 414 2213 133 3 0 chr2 246948029 246948330 -3739524 + AluSx SINE Alu 1 302 -10 450 0 0 0 chr2 246948330 246948380 -3739474 + (GGAA)n Simple_repeat Simple_repeat 1 50 0 2262 118 19 13 chr2 246948380 246948754 -3739100 - MER84 LTR ERVI -90 417 42 32 26 0 0 chr2 246948860 246948899 -3738955 + AT_rich Low_complexity Low_complexity 1 39 0 249 196 0 0 chr2 246948899 246948950 -3738904 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 2278 103 3 3 chr2 246948951 246949242 -3738612 - AluSx SINE Alu -21 291 1 1905 181 3 13 chr2 246949245 246949560 -3738294 - AluJb SINE Alu 0 312 1 1509 167 112 11 chr2 246949617 246949729 -3738125 + AluJo SINE Alu 1 100 -212 2336 88 7 10 chr2 246949729 246950037 -3737817 + AluSp SINE Alu 1 307 -6 1509 167 112 11 chr2 246950037 246950200 -3737654 + AluJo SINE Alu 100 304 -8 647 227 236 0 chr2 246950289 246950514 -3737340 - L1ME LINE L1 -487 5683 5406 373 168 38 0 chr2 246950514 246950616 -3737238 - FRAM SINE Alu -69 97 18 724 291 75 16 chr2 246950617 246951005 -3736849 - L1ME LINE L1 -759 5387 4977 1020 191 121 75 chr2 246952356 246952728 -3735126 + MLT1B LTR MaLR 2 390 0 1741 171 13 29 chr2 246952798 246953248 -3734606 - AluJo SINE Alu 0 445 1 248 266 51 0 chr2 246954126 246954205 -3733649 - MLT1D LTR MaLR -35 432 350 1591 219 37 28 chr2 246954205 246954663 -3733191 - MLT1B LTR MaLR 0 390 1 * 1595 173 99 9 chr2 246954663 246955003 -3732851 - MLT1D LTR MaLR -134 371 1 2059 149 0 3 chr2 246955113 246955415 -3732439 + AluSx SINE Alu 1 301 -11 1089 178 75 93 chr2 246957082 246957458 -3730396 + MLT1B LTR MaLR 18 386 -4 264 276 35 0 chr2 246958014 246958072 -3729782 + MIR SINE MIR 15 74 -188 1251 214 67 38 chr2 246958087 246958466 -3729388 - LTR10C LTR ERV1 -43 590 186 5189 118 39 26 chr2 246958581 246958894 -3728960 + MER4D LTR ERV1 1 308 -595 2131 92 58 10 chr2 246958894 246959186 -3728668 - AluSg SINE Alu -4 306 1 5189 118 39 26 chr2 246959186 246959609 -3728245 + MER4D LTR ERV1 308 754 -149 3558 137 60 2 chr2 246959609 246960209 -3727645 - MER41B LTR ERV1 0 635 1 5189 118 39 26 chr2 246960209 246960362 -3727492 + MER4D LTR ERV1 754 903 0 443 125 114 0 chr2 246960365 246960453 -3727401 + MIR SINE MIR 101 198 -64 2190 98 41 0 chr2 246961020 246961315 -3726539 - AluSx SINE Alu -5 307 1 1831 125 20 24 chr2 246961377 246961672 -3726182 - AluJb SINE Alu -15 297 4 22 80 0 0 chr2 246962703 246962753 -3725101 + GC_rich Low_complexity Low_complexity 1 50 0 23 78 0 0 chr2 246962822 246962873 -3724981 + GC_rich Low_complexity Low_complexity 1 51 0 26 30 0 0 chr2 246962895 246962928 -3724926 + GC_rich Low_complexity Low_complexity 1 33 0 1401 198 11 11 chr2 246963425 246963698 -3724156 + AluSx SINE Alu 10 282 -30 23 33 0 0 chr2 246963717 246963747 -3724107 + GC_rich Low_complexity Low_complexity 1 30 0 306 240 96 10 chr2 246964114 246964218 -3723636 + MIR SINE MIR 41 153 -55 180 310 67 71 chr2 246964264 246964503 -3723351 - L2 LINE L2 -208 3064 2827 299 200 227 0 chr2 246966288 246966398 -3721456 - L1MA10 LINE L1 0 6334 6200 1774 166 3 33 chr2 246966399 246966706 -3721148 + AluJb SINE Alu 2 299 -13 209 221 142 71 chr2 246966752 246966879 -3720975 + MIR3 SINE MIR 70 205 -3 2044 115 24 17 chr2 246967033 246967328 -3720526 - AluSq SINE Alu -16 297 1 231 36 0 0 chr2 246967632 246967660 -3720194 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 2032 120 0 4 chr2 246967663 246967937 -3719917 - AluSc SINE Alu -36 273 1 1093 133 20 10 chr2 246968081 246968276 -3719578 + L1MC1 LINE L1 6128 6324 -9 2191 135 0 10 chr2 246968856 246969168 -3718686 - AluJb SINE Alu -3 309 1 256 319 118 24 chr2 246969789 246969958 -3717896 + MIR3 SINE MIR 1 185 -23 919 177 12 0 chr2 246970309 246970473 -3717381 - AluJo/FRAM SINE Alu 0 302 137 1502 132 151 0 chr2 246970476 246970586 -3717268 - AluSq SINE Alu -6 297 205 1552 142 5 5 chr2 246970586 246970805 -3717049 - AluSp SINE Alu -94 219 1 1502 132 151 0 chr2 246970805 246970817 -3717037 - AluSq SINE Alu -98 205 196 2525 83 0 3 chr2 246970817 246971130 -3716724 - AluSx SINE Alu 0 312 1 1502 132 151 0 chr2 246971130 246971264 -3716590 - AluSq SINE Alu -107 196 1 705 178 0 0 chr2 246971269 246971387 -3716467 - FLAM_C SINE Alu -15 118 1 1944 146 3 30 chr2 246971421 246971723 -3716131 - AluJb SINE Alu -15 297 4 1898 124 4 0 chr2 246972003 246972253 -3715601 - AluSx SINE Alu -61 251 1 1136 174 122 70 chr2 246972754 246973099 -3714755 - MLT1A1 LTR MaLR -2 363 1 660 329 56 8 chr2 246974211 246974567 -3713287 - LTR16A LTR ERVL -6 444 72 1097 182 117 75 chr2 246976579 246976937 -3710917 - MLT1A2 LTR MaLR 0 374 2 2055 154 0 0 chr2 246977928 246978226 -3709628 - AluJb SINE Alu 0 312 15 350 265 39 10 chr2 246978233 246978335 -3709519 - MER5B DNA MER1_type -39 139 35 318 306 9 0 chr2 246978339 246978450 -3709404 + L1MB8 LINE L1 6064 6175 -3 810 183 0 0 chr2 246979317 246979448 -3708406 - FLAM_C SINE Alu -2 131 1 257 143 12 48 chr2 246980328 246980412 -3707442 + CT-rich Low_complexity Low_complexity 2 82 0 1050 196 0 0 chr2 246981088 246981267 -3706587 - AluJo SINE Alu -7 305 127 764 128 0 8 chr2 246981328 246981445 -3706409 - AluJo SINE Alu -194 118 3 4947 161 52 15 chr2 246981447 246982446 -3705408 - L1MA9 LINE L1 -59 6253 5159 1504 200 6 47 chr2 246982446 246982766 -3705088 - AluJb SINE Alu -4 308 2 4947 161 52 15 chr2 246982766 246983554 -3704300 - L1MA9 LINE L1 -1153 5159 4402 850 172 7 0 chr2 246983586 246983737 -3704117 - L1MA9 LINE L1 -1897 4249 4098 2243 122 0 0 chr2 246984479 246984775 -3703079 + AluSx SINE Alu 1 296 -16 1184 142 0 0 chr2 246984779 246984948 -3702906 + AluSg/x SINE Alu 133 301 -11 2040 136 0 0 chr2 246985679 246985966 -3701888 - AluSx SINE Alu -25 287 1 266 227 10 62 chr2 246985976 246986073 -3701781 - MER112 DNA MER1_type -168 92 1 288 98 359 11 chr2 246986311 246986403 -3701451 + L1MC5 LINE L1 7806 7929 -32 964 174 0 51 chr2 246986483 246986661 -3701193 - AluJ SINE Alu -15 297 129 1378 94 0 0 chr2 246986681 246986861 -3700993 + AluY SINE Alu 123 302 -9 850 145 8 0 chr2 246986871 246986995 -3700859 - AluJ SINE Alu -187 125 1 21 0 0 0 chr2 246987636 246987657 -3700197 + AT_rich Low_complexity Low_complexity 1 21 0 1513 118 9 0 chr2 246987672 246987883 -3699971 - AluSg/x SINE Alu 0 310 98 2113 124 3 3 chr2 246987945 246988244 -3699610 - AluSx SINE Alu -13 299 1 347 241 56 19 chr2 246988772 246988880 -3698974 + MIR3 SINE MIR 67 178 -30 2244 103 0 0 chr2 246989073 246989364 -3698490 - AluSg SINE Alu -19 291 1 1830 180 0 0 chr2 246989509 246989798 -3698056 + AluJb SINE Alu 1 289 -23 1339 113 0 0 chr2 246990176 246990353 -3697501 - AluSp SINE Alu 0 313 137 637 225 78 23 chr2 246991145 246991363 -3696491 + MIR SINE MIR 9 238 -24 2403 94 0 3 chr2 246992555 246992854 -3695000 - AluSx SINE Alu -14 298 1 2120 108 23 16 chr2 246993018 246993325 -3694529 + AluSx SINE Alu 1 309 -3 33 0 0 0 chr2 246994192 246994225 -3693629 + AT_rich Low_complexity Low_complexity 1 33 0 2380 203 130 52 chr2 246994232 246995149 -3692705 - L1ME2 LINE L1 -9 6155 5160 1435 162 79 35 chr2 246995150 246995440 -3692414 - AluSx SINE Alu -1 311 9 1359 252 52 14 chr2 246995445 246995869 -3691985 - L1ME2 LINE L1 -977 5169 4730 2415 92 3 0 chr2 246995896 246996200 -3691654 - AluSg SINE Alu -5 305 1 619 212 178 4 chr2 246996200 246996459 -3691395 - L1ME2 LINE L1 -2791 3355 3052 2323 201 43 64 chr2 246996519 246997112 -3690742 - L1ME1 LINE L1 -285 5881 5302 2482 74 7 0 chr2 246997112 246997411 -3690443 - AluSp SINE Alu -12 301 1 2323 201 43 64 chr2 246997411 246997477 -3690377 - L1ME1 LINE L1 -864 5302 5236 1704 101 35 11 chr2 246997614 246997901 -3689953 + AluY SINE Alu 1 294 -17 1321 111 0 6 chr2 246998156 246998336 -3689518 - AluSx SINE Alu -12 300 122 1168 22 0 0 chr2 246998363 246998497 -3689357 - L1PA2 LINE L1 -2 6153 6020 1023 106 0 0 chr2 246998497 246998629 -3689225 - AluSx SINE Alu -181 132 1 2284 90 0 62 chr2 246998702 246999024 -3688830 - AluSx SINE Alu -10 302 1 1655 210 133 76 chr2 246999852 247000685 -3687169 - L1ME1 LINE L1 -5 6230 5446 1872 196 24 79 chr2 247000685 247001217 -3686637 + MLT1D LTR MaLR 1 503 -2 1655 210 133 76 chr2 247001217 247001272 -3686582 - L1ME1 LINE L1 -789 5446 5396 1985 149 3 16 chr2 247001272 247001588 -3686266 - AluJb SINE Alu 0 312 1 1655 210 133 76 chr2 247001588 247002102 -3685752 - L1ME1 LINE L1 -839 5396 4913 2186 142 80 18 chr2 247002102 247002503 -3685351 - MSTB LTR MaLR 0 426 1 1655 210 133 76 chr2 247002503 247002839 -3685015 - L1ME1 LINE L1 -1322 4913 4597 2421 94 13 0 chr2 247002839 247003148 -3684706 - AluSp SINE Alu 0 313 1 1655 210 133 76 chr2 247003148 247003215 -3684639 - L1ME1 LINE L1 -1638 4597 4535 2098 141 0 0 chr2 247003215 247003514 -3684340 - AluSx SINE Alu -13 299 1 1655 210 133 76 chr2 247003514 247004056 -3683798 - L1ME1 LINE L1 -1700 4535 4025 1644 125 61 78 chr2 247004056 247004351 -3683503 - AluJb SINE Alu -22 290 1 1655 210 133 76 chr2 247004351 247004830 -3683024 - L1ME1 LINE L1 -2210 4025 3126 1153 264 176 22 chr2 247004833 247005712 -3682142 - L1ME1 LINE L1 -4419 1977 968 869 226 30 115 chr2 247005887 247006261 -3681593 - Charlie2a DNA MER1_type -103 2759 2431 2210 119 3 0 chr2 247006261 247006563 -3681291 - AluSg SINE Alu -7 303 1 869 226 30 115 chr2 247006563 247006656 -3681198 - Charlie2a DNA MER1_type -431 2431 2332 847 262 262 17 chr2 247006658 247007671 -3680183 + L2 LINE L2 2048 3311 -2 1939 204 95 79 chr2 247007681 247007975 -3679879 - Charlie2a DNA MER1_type -560 2302 2014 1862 162 3 20 chr2 247007975 247008272 -3679582 - AluJo SINE Alu -17 295 4 1939 204 95 79 chr2 247008272 247008784 -3679070 - Charlie2a DNA MER1_type -848 2014 1483 602 284 59 109 chr2 247008912 247009085 -3678769 - Charlie2a DNA MER1_type -2284 578 398 1731 152 64 14 chr2 247009085 247009382 -3678472 + AluJo SINE Alu 1 312 0 602 284 59 109 chr2 247009382 247009786 -3678068 - Charlie2a DNA MER1_type -2464 398 30 268 292 105 19 chr2 247011172 247011334 -3676520 + L1MC/D LINE L1 5008 5183 -963 300 286 66 50 chr2 247011415 247011597 -3676257 + L1MC/D LINE L1 5286 5470 -2338 318 253 46 0 chr2 247012148 247012235 -3675619 + L2 LINE L2 3212 3302 -11 221 116 116 0 chr2 247012909 247012952 -3674902 - L2 LINE L2 -1 3312 3265 709 130 0 0 chr2 247014651 247014782 -3673072 - AluSg/x SINE Alu 0 303 173 1771 116 90 0 chr2 247015478 247015745 -3672109 - AluSp SINE Alu -22 291 1 2241 109 3 7 chr2 247015745 247016049 -3671805 - AluSq SINE Alu -10 303 1 181 232 122 0 chr2 247016253 247016335 -3671519 + L2 LINE L2 3141 3232 -40 204 269 72 106 chr2 247016881 247017089 -3670765 - L2 LINE L2 -17 3255 3055 599 278 23 0 chr2 247017226 247017399 -3670455 - MLT1I LTR MaLR -232 177 1 251 266 76 0 chr2 247017452 247017531 -3670323 - L1ME4a LINE L1 -34 6087 6003 705 230 140 0 chr2 247017764 247017942 -3669912 - MER58C DNA MER1_type -9 206 4 356 307 51 47 chr2 247017991 247018248 -3669606 - L1ME4a LINE L1 -454 5667 5410 712 157 0 0 chr2 247018248 247018363 -3669491 - AluSg/x SINE Alu 0 309 195 206 212 30 30 chr2 247018929 247018995 -3668859 + L3 LINE CR1 1053 1118 -459 206 361 9 0 chr2 247019090 247019198 -3668656 + L3 LINE CR1 1464 1572 -5 230 29 59 0 chr2 247020372 247020406 -3667448 + (GTTTG)n Simple_repeat Simple_repeat 5 40 0 1544 182 8 0 chr2 247020406 247020659 -3667195 - AluJo SINE Alu -31 281 27 183 227 0 0 chr2 247022224 247022268 -3665586 + MIR SINE MIR 79 122 -140 2356 74 3 3 chr2 247022477 247022773 -3665081 - AluY SINE Alu -15 296 1 384 322 72 49 chr2 247023307 247023695 -3664159 + L1ME LINE L1 5267 5663 -458 30 27 0 0 chr2 247024997 247025034 -3662820 + AT_rich Low_complexity Low_complexity 1 37 0 424 105 0 0 chr2 247025047 247025104 -3662750 - U6 snRNA snRNA -50 57 1 22 0 0 0 chr2 247025316 247025338 -3662516 + AT_rich Low_complexity Low_complexity 1 22 0 2415 52 0 26 chr2 247025347 247025653 -3662201 + AluY SINE Alu 1 298 -13 405 289 86 27 chr2 247025738 247025925 -3661929 + MIR SINE MIR 44 241 -21 1748 151 60 17 chr2 247025974 247026273 -3661581 - AluJo SINE Alu 0 312 1 1423 147 155 8 chr2 247028405 247028656 -3659198 + AluJb SINE Alu 1 288 -24 887 136 8 0 chr2 247028689 247028821 -3659033 + FLAM_C SINE Alu 1 133 0 2132 114 0 10 chr2 247030182 247030479 -3657375 + AluSq SINE Alu 1 294 -19 2253 92 3 0 chr2 247030926 247031231 -3656623 - AluSx SINE Alu -6 306 1 180 97 0 0 chr2 247032191 247032222 -3655632 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 1680 159 0 24 chr2 247032224 247032519 -3655335 - AluJo SINE Alu -24 288 1 1413 171 70 0 chr2 247032599 247032857 -3654997 + AluJb SINE Alu 6 281 -31 32 0 0 0 chr2 247033042 247033074 -3654780 + AT_rich Low_complexity Low_complexity 1 32 0 1543 149 24 12 chr2 247033659 247033914 -3653940 - AluSx SINE Alu -20 292 35 2183 97 0 0 chr2 247034992 247035282 -3652572 + AluSq SINE Alu 1 290 -23 26 30 0 0 chr2 247035282 247035315 -3652539 + AT_rich Low_complexity Low_complexity 1 33 0 318 273 55 55 chr2 247035335 247035500 -3652354 - L2 LINE L2 -307 3006 2842 * 523 319 38 9 chr2 247035491 247035704 -3652150 - MIR SINE MIR -27 235 17 333 231 125 10 chr2 247037001 247037105 -3650749 + MIR3 SINE MIR 81 196 -12 1747 152 10 24 chr2 247040884 247041181 -3646673 - AluSx SINE Alu -19 293 1 228 67 0 0 chr2 247041688 247041718 -3646136 + (T)n Simple_repeat Simple_repeat 1 30 0 416 189 110 55 chr2 247043598 247043725 -3644129 + L1MD2 LINE L1 361 494 -6227 * 2628 222 115 35 chr2 247043722 247044356 -3643498 + L1MD2 LINE L1 1007 1589 -4951 1578 112 123 11 chr2 247044356 247044624 -3643230 + AluSg1 SINE Alu 1 298 -11 2628 222 115 35 chr2 247044624 247045056 -3642798 + L1MD2 LINE L1 1589 1985 -4555 1559 164 10 32 chr2 247045056 247045193 -3642661 + AluJo SINE Alu 1 140 -172 2292 70 3 3 chr2 247045193 247045491 -3642363 + AluY SINE Alu 1 298 -13 1559 164 10 32 chr2 247045491 247045663 -3642191 + AluJo SINE Alu 140 303 -9 2628 222 115 35 chr2 247045663 247045805 -3642049 + L1MD2 LINE L1 1985 2401 -4139 1125 215 52 115 chr2 247045807 247045836 -3642018 + L1M4 LINE L1 3 32 -6510 2105 119 0 0 chr2 247045836 247046130 -3641724 - AluSx SINE Alu -18 294 1 1125 215 52 115 chr2 247046130 247046314 -3641540 + L1M4 LINE L1 32 226 -6316 2089 117 7 3 chr2 247046314 247046621 -3641233 - AluSp SINE Alu -4 309 2 1125 215 52 115 chr2 247046621 247046773 -3641081 + L1M4 LINE L1 226 337 -6205 1950 91 4 0 chr2 247046773 247047037 -3640817 - AluSq SINE Alu -48 265 1 1125 215 52 115 chr2 247047037 247047130 -3640724 + L1M4 LINE L1 337 434 -6108 1473 211 141 17 chr2 247047176 247047392 -3640462 + L1M4 LINE L1 4837 5025 -1619 2327 105 54 20 chr2 247047392 247047744 -3640110 + THE1B LTR MaLR 1 364 0 1473 211 141 17 chr2 247047744 247047987 -3639867 + L1M4 LINE L1 5025 5353 -1291 548 191 0 9 chr2 247047988 247048093 -3639761 - FLAM_A SINE Alu -14 128 25 1908 133 0 13 chr2 247048113 247048414 -3639440 - AluJb SINE Alu -15 297 1 240 210 32 16 chr2 247048414 247048476 -3639378 + L1M4 LINE L1 5341 5403 -1241 1502 112 9 0 chr2 247048540 247048754 -3639100 + AluSg/x SINE Alu 87 302 -10 849 161 43 6 chr2 247048769 247048931 -3638923 + L1MB7 LINE L1 5998 6165 -19 828 247 150 3 chr2 247048936 247049421 -3638433 + L1MD2 LINE L1 2385 2942 -3598 2812 200 70 47 chr2 247049439 247050024 -3637830 + L1MD2 LINE L1 5994 6564 -189 843 64 0 0 chr2 247050024 247050134 -3637720 + (TA)n Simple_repeat Simple_repeat 2 111 0 2812 200 70 47 chr2 247050134 247050151 -3637703 + L1MD2 LINE L1 6564 6579 -174 1993 108 7 0 chr2 247050151 247050429 -3637425 - AluSg SINE Alu -30 280 1 2812 200 70 47 chr2 247050429 247050494 -3637360 + L1MD2 LINE L1 6579 6641 -112 1507 132 24 114 chr2 247050494 247050835 -3637019 - AluYb8 SINE Alu -8 310 1 2812 200 70 47 chr2 247050835 247050905 -3636949 + L1MD2 LINE L1 6641 6750 -3 1626 129 32 22 chr2 247050915 247051193 -3636661 + AluJb SINE Alu 1 281 -31 252 0 0 0 chr2 247051196 247051224 -3636630 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 2182 95 0 0 chr2 247051278 247051573 -3636281 + AluSx SINE Alu 1 295 -17 313 261 54 0 chr2 247051576 247051668 -3636186 + L1M4 LINE L1 1490 1586 -5239 358 309 134 26 chr2 247051727 247051921 -3635933 + L1M4 LINE L1 1521 1735 -4911 786 148 15 7 chr2 247051924 247052059 -3635795 - BC200 scRNA scRNA -64 136 1 531 265 99 20 chr2 247052059 247052361 -3635493 + L1M4 LINE L1 1872 2197 -4628 609 247 142 0 chr2 247052362 247052552 -3635302 - MER20 DNA MER1_type 0 219 3 378 214 107 9 chr2 247052573 247052685 -3635169 - L1MEd LINE L1 -5045 1074 952 1574 154 102 9 chr2 247052701 247053025 -3634829 - L1MC1 LINE L1 -6 6327 5974 22 0 0 0 chr2 247053101 247053123 -3634731 + AT_rich Low_complexity Low_complexity 1 22 0 2517 83 8 17 chr2 247053188 247053548 -3634306 - pTR5 LTR ERV1 -2016 422 66 364 227 21 0 chr2 247053548 247053645 -3634209 - LTR30 LTR ERV1 -80 642 544 3329 148 33 37 chr2 247053645 247054456 -3633398 - pTR5 LTR ERV1 -413 2025 743 2046 124 0 10 chr2 247055004 247055310 -3632544 - AluSx SINE Alu -9 303 1 558 247 144 21 chr2 247055812 247056006 -3631848 + MIR SINE MIR 45 262 0 221 289 276 13 chr2 247056131 247056432 -3631422 + L2 LINE L2 2301 2680 -634 286 311 63 37 chr2 247057559 247057946 -3629908 - L2 LINE L2 -265 3048 2558 2162 108 0 7 chr2 247058632 247058937 -3628917 - AluSx SINE Alu -9 303 1 209 291 110 116 chr2 247059238 247059467 -3628387 - L2 LINE L2 -23 3290 3062 1852 110 107 0 chr2 247059467 247059748 -3628106 - AluSx SINE Alu -1 311 1 209 291 110 116 chr2 247059748 247059899 -3627955 - L2 LINE L2 -251 3062 2912 886 173 6 12 chr2 247060135 247060297 -3627557 - FAM SINE Alu -10 165 5 2106 86 7 0 chr2 247061881 247062198 -3625656 - AluSg SINE Alu 0 319 1 234 224 59 35 chr2 247062223 247062308 -3625546 + L1ME LINE L1 5641 5727 -394 956 244 44 7 chr2 247062345 247062620 -3625234 - Charlie1b DNA MER1_type -199 324 40 464 284 194 25 chr2 247062715 247062970 -3624884 - L2 LINE L2 -602 2712 2405 2730 94 6 3 chr2 247062970 247063333 -3624521 - THE1B LTR MaLR 0 364 1 464 284 194 25 chr2 247063333 247063355 -3624499 - L2 LINE L2 -909 2405 2388 228 235 0 71 chr2 247063550 247063635 -3624219 + Charlie7 DNA MER1_type 2534 2612 0 1783 168 0 0 chr2 247064492 247064783 -3623071 + AluJo SINE Alu 1 291 -21 607 266 84 33 chr2 247064970 247065184 -3622670 - L1MC/D LINE L1 -2054 6252 6028 22 35 0 0 chr2 247065214 247065243 -3622611 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr2 247065278 247065310 -3622544 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr2 247066524 247066552 -3621302 + AT_rich Low_complexity Low_complexity 1 28 0 1865 131 21 3 chr2 247066619 247066910 -3620944 + AluSx SINE Alu 1 296 -16 210 37 0 0 chr2 247067171 247067198 -3620656 + (TTTAG)n Simple_repeat Simple_repeat 3 29 0 1978 105 11 3 chr2 247067198 247067483 -3620371 - AluSq SINE Alu -26 287 1 4519 219 57 26 chr2 247067483 247068579 -3619275 - L1MC/D LINE L1 -1867 4777 3716 971 54 78 0 chr2 247068579 247068708 -3619146 + MER85 DNA T2_type 1 139 0 4519 219 57 26 chr2 247068708 247068800 -3619054 - L1MC/D LINE L1 -2928 3716 3628 1813 166 17 0 chr2 247068800 247069089 -3618765 - AluSx SINE Alu -16 296 3 4519 219 57 26 chr2 247069089 247069271 -3618583 - L1MC/D LINE L1 -3016 3628 3364 1287 30 0 37 chr2 247069271 247069435 -3618419 + SVA Other Other 1229 1386 0 1937 223 34 54 chr2 247069439 247070088 -3617766 - L1MC/D LINE L1 -3270 3374 2739 3339 136 87 4 chr2 247070088 247070631 -3617223 + LTR69 LTR ERVL 1 588 0 2153 105 0 7 chr2 247070648 247070953 -3616901 - AluSx SINE Alu -9 303 1 542 287 47 30 chr2 247070958 247071362 -3616492 - L1MC/D LINE L1 -3940 2706 2296 2061 134 0 0 chr2 247071393 247071692 -3616162 - AluSx SINE Alu -13 299 1 1674 177 23 0 chr2 247071722 247072067 -3615787 - AluJb SINE Alu 0 352 1 1446 255 20 23 chr2 247072384 247072919 -3614935 - L1MC/D LINE L1 -4833 1709 1217 244 167 0 0 chr2 247073668 247073710 -3614144 - Alu SINE Alu -12 290 249 526 157 167 0 chr2 247073710 247073812 -3614042 - AluJo/FLAM SINE Alu -192 120 2 198 301 82 14 chr2 247075856 247075929 -3611925 + L2 LINE L2 3193 3270 -2 4131 209 65 33 chr2 247076532 247077009 -3610845 + L1MDa LINE L1 173 634 -5906 2134 119 10 0 chr2 247077009 247077311 -3610543 + AluSx SINE Alu 1 305 -7 2238 92 0 3 chr2 247077311 247077613 -3610241 + AluSg SINE Alu 1 302 -8 4131 209 65 33 chr2 247077613 247078134 -3609720 + L1MDa LINE L1 634 1137 -5403 2009 90 17 30 chr2 247078134 247078435 -3609419 + AluY SINE Alu 1 297 -14 4131 209 65 33 chr2 247078435 247079125 -3608729 + L1MDa LINE L1 1137 2305 -4235 1736 149 17 10 chr2 247079131 247079426 -3608428 + AluJo SINE Alu 6 302 -10 2228 84 3 0 chr2 247079435 247079731 -3608123 + AluSp SINE Alu 1 297 -16 1165 181 0 19 chr2 247079740 247079955 -3607899 + AluJb SINE Alu 1 211 -101 1651 247 42 25 chr2 247079956 247080479 -3607375 + L1MDa LINE L1 3626 4157 -2383 390 289 83 15 chr2 247280561 247280718 -3407136 + L1MDa LINE L1 2417 2583 -3959 1901 123 0 4 chr2 247281022 247281299 -3406555 + AluSg SINE Alu 22 297 -13 519 300 90 40 chr2 247282198 247283056 -3404798 + L1MDa LINE L1 2629 3560 -2980 1469 195 11 17 chr2 247283056 247283343 -3404511 - AluJo SINE Alu -26 286 2 519 300 90 40 chr2 247283343 247283624 -3404230 + L1MDa LINE L1 3559 3825 -2715 494 289 97 10 chr2 247283642 247283940 -3403914 + L1MDa LINE L1 3989 4312 -2228 887 231 140 58 chr2 247284061 247284547 -3403307 + L1MC4 LINE L1 7512 8037 -5 365 259 81 63 chr2 247284573 247284747 -3403107 + L1MDa LINE L1 4470 4646 -1894 817 58 0 0 chr2 247284761 247284864 -3402990 + L1PA5 LINE L1 6052 6154 0 651 275 97 63 chr2 247284865 247285662 -3402192 + L1MDa LINE L1 4686 5509 -1031 3621 122 5 20 chr2 247285773 247286329 -3401525 - LTR14 LTR ERVK 0 548 1 238 326 71 65 chr2 247288975 247289159 -3398695 - L2 LINE L2 -1 3271 3087 189 267 62 5 chr2 247289886 247290005 -3397849 + MIR SINE MIR 80 206 -2 812 203 99 108 chr2 247291797 247292241 -3395613 - MLT1D LTR MaLR 0 505 66 526 239 15 0 chr2 247292777 247292907 -3394947 + MER94 DNA DNA 3 134 0 235 261 65 43 chr2 247293297 247293435 -3394419 + LTR33 LTR ERVL 327 467 -54 2161 184 35 16 chr2 247293453 247293877 -3393977 + MSTB1 LTR MaLR 1 432 0 450 288 44 12 chr2 247294265 247294425 -3393429 + MER97a DNA MER1_type? 15 179 -715 277 228 173 12 chr2 247295127 247295289 -3392565 + LTR33 LTR ERVL 329 516 -5 1561 279 100 24 chr2 247295612 247296360 -3391494 + HAL1 LINE L1 1569 2373 -134 448 115 0 0 chr2 247296376 247296437 -3391417 - AluS SINE Alu -248 62 2 2151 115 0 3 chr2 247296791 247297095 -3390759 - AluSx SINE Alu -9 303 1 400 302 106 74 chr2 247297154 247297531 -3390323 + HAL1b LINE L1 392 780 -568 340 325 59 72 chr2 247297644 247298019 -3389835 + L1ME4a LINE L1 5737 6106 -15 891 222 30 0 chr2 247299322 247299525 -3388329 + L1MB5 LINE L1 5958 6166 -8 368 317 104 0 chr2 247299754 247299793 -3388061 - L1ME4a LINE L1 -3 6118 6084 3399 122 9 61 chr2 247299793 247300349 -3387505 - MER1A DNA MER1_type 0 527 1 368 317 104 0 chr2 247300349 247300473 -3387381 - L1ME4a LINE L1 -37 6084 5938 207 0 0 0 chr2 247301714 247301737 -3386117 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 2217 199 112 2 chr2 247301804 247302267 -3385587 + MER44D DNA MER2_type 1 569 -36 2102 108 3 0 chr2 247302818 247303113 -3384741 - AluSx SINE Alu -16 296 1 245 315 97 12 chr2 247303245 247303410 -3384444 + LTR41 LTR ERVL 584 762 -11 24 0 0 0 chr2 247303460 247303484 -3384370 + AT_rich Low_complexity Low_complexity 1 24 0 223 293 226 0 chr2 247303789 247303895 -3383959 - MIR SINE MIR -85 177 48 2237 87 0 13 chr2 247305214 247305525 -3382329 + AluSq SINE Alu 1 307 -6 2362 52 7 13 chr2 247307192 247307500 -3380354 - AluY SINE Alu -5 306 1 545 245 84 32 chr2 247307640 247307998 -3379856 - MLT1E LTR MaLR -15 578 1 234 375 35 0 chr2 247308089 247308233 -3379621 - MIR3 SINE MIR -2 206 58 1411 82 0 0 chr2 247309750 247309934 -3377920 + L1PA14 LINE L1 5977 6160 -1 294 123 37 55 chr2 247312003 247312166 -3375688 + (CA)n Simple_repeat Simple_repeat 1 160 0 236 379 98 11 chr2 247313392 247313566 -3374288 - MIR SINE MIR -72 190 2 1654 179 0 13 chr2 247313977 247314301 -3373553 + AluSx SINE Alu 1 312 0 373 210 101 29 chr2 247314681 247314819 -3373035 + MER103 DNA DNA 12 159 -7 1967 130 3 7 chr2 247315256 247315556 -3372298 - AluSq SINE Alu -12 301 3 194 277 72 0 chr2 247315972 247316055 -3371799 - MIR SINE MIR -17 245 157 254 301 85 23 chr2 247316680 247316856 -3370998 - MIR3 SINE MIR 0 208 22 1006 173 27 32 chr2 247317255 247317311 -3370543 - MER58A DNA MER1_type -2207 213 158 1930 174 107 57 chr2 247317311 247317353 -3370501 - MLT2B1 LTR ERVL 0 520 482 549 80 0 0 chr2 247317353 247317428 -3370426 + (CA)n Simple_repeat Simple_repeat 2 76 0 1930 174 107 57 chr2 247317428 247317880 -3369974 - MLT2B1 LTR ERVL -38 482 1 1006 173 27 32 chr2 247317880 247318008 -3369846 - MER58A DNA MER1_type -2262 158 30 673 120 0 0 chr2 247318572 247318664 -3369190 + AluS SINE Alu 3 94 -219 252 286 87 16 chr2 247318837 247319022 -3368832 + HAL1b LINE L1 392 589 -759 1974 126 0 0 chr2 247319195 247319489 -3368365 + AluJb SINE Alu 1 294 -18 1973 130 3 3 chr2 247319834 247320133 -3367721 + AluSx SINE Alu 1 299 -13 5249 109 31 15 chr2 247320178 247320986 -3366868 - L1PA16 LINE L1 -9 6157 5337 259 148 0 74 chr2 247320986 247321040 -3366814 + U2 snRNA snRNA 1 50 -138 11240 210 26 13 chr2 247321041 247321098 -3366756 - L1 LINE L1 -816 5330 5275 1780 146 118 43 chr2 247321098 247321495 -3366359 + MSTA LTR MaLR 2 428 0 11240 210 26 13 chr2 247321495 247324110 -3363744 - L1 LINE L1 -871 5275 2623 24 32 0 0 chr2 247324409 247324440 -3363414 + AT_rich Low_complexity Low_complexity 1 31 0 708 312 74 75 chr2 247324487 247324672 -3363182 + L1M4 LINE L1 2368 2552 -3594 2107 113 0 0 chr2 247324672 247324964 -3362890 + AluSx SINE Alu 20 311 -1 708 312 74 75 chr2 247324964 247325429 -3362425 + L1M4 LINE L1 2552 3017 -3129 294 365 0 0 chr2 247325460 247325564 -3362290 - MIR SINE MIR -2 260 157 334 228 59 0 chr2 247325721 247325822 -3362032 + L1P LINE L1 3181 3287 -2859 2078 119 0 13 chr2 247325979 247326282 -3361572 + AluSg SINE Alu 2 300 -10 2361 107 48 22 chr2 247326685 247327040 -3360814 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr2 247327275 247327303 -3360551 + AT_rich Low_complexity Low_complexity 1 28 0 413 301 71 13 chr2 247327356 247327582 -3360272 + L1M4 LINE L1 3709 3947 -2199 840 108 85 57 chr2 247327850 247327971 -3359883 + MER53 DNA DNA 1 130 -59 2215 89 0 0 chr2 247327971 247328262 -3359592 + AluSg SINE Alu 3 293 -17 840 108 85 57 chr2 247328262 247328316 -3359538 + MER53 DNA DNA 130 181 -8 314 326 46 14 chr2 247328907 247329125 -3358729 + L1M4 LINE L1 4023 4247 -1899 263 256 128 47 chr2 247330293 247330379 -3357475 - L2 LINE L2 0 3272 3180 590 232 35 0 chr2 247330387 247330832 -3357022 + (TGGA)n Simple_repeat Simple_repeat 1 460 0 498 201 28 22 chr2 247330850 247331029 -3356825 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 286 310 26 45 chr2 247331217 247331372 -3356482 - L2 LINE L2 -243 3070 2919 347 333 31 0 chr2 247331699 247331795 -3356059 + L1MC4 LINE L1 6603 6701 -1341 2293 98 10 7 chr2 247331796 247332103 -3355751 - AluSc SINE Alu -1 308 1 26 30 0 0 chr2 247332175 247332208 -3355646 + AT_rich Low_complexity Low_complexity 1 33 0 240 219 167 44 chr2 247332233 247332347 -3355507 + L1ME4a LINE L1 5994 6121 0 535 311 95 32 chr2 247332791 247333475 -3354379 - L1MEd LINE L1 -2346 3783 3057 2588 87 19 11 chr2 247333479 247333845 -3354009 - L1PB1 LINE L1 -1 6150 5782 321 356 0 0 chr2 247333850 247333940 -3353914 + L1MC4 LINE L1 6614 6703 -1339 * 334 344 0 0 chr2 247333860 247333950 -3353904 - L1MC4 LINE L1 -1339 6703 6614 5690 169 14 2 chr2 247333979 247335615 -3352239 - L1P5 LINE L1 -360 5791 4134 13639 158 109 8 chr2 247335671 247339450 -3348404 - L1PBa LINE L1 -2687 4175 11 699 301 67 14 chr2 247339469 247339887 -3347967 - L1MEd LINE L1 -3085 3044 2605 425 319 43 24 chr2 247339917 247340337 -3347517 - L1MEd LINE L1 -3609 2520 2093 1002 237 0 9 chr2 247340393 247340612 -3347242 + MER58A DNA MER1_type 1 217 -7 2052 272 85 63 chr2 247341117 247342595 -3345259 - L1MEd LINE L1 -4754 1556 4 270 0 0 0 chr2 247344515 247344545 -3343309 + (A)n Simple_repeat Simple_repeat 1 30 0 334 326 63 21 chr2 247346938 247347128 -3340726 - MIR SINE MIR -22 240 43 207 100 0 0 chr2 247347745 247347775 -3340079 + (A)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr2 247348806 247348828 -3339026 + AT_rich Low_complexity Low_complexity 1 22 0 218 299 28 20 chr2 247349226 247349373 -3338481 + MIR3 SINE MIR 10 153 -63 390 311 109 46 chr2 247350138 247350504 -3337350 - MLT1J2 LTR MaLR -61 389 1 906 211 58 29 chr2 247350511 247350786 -3337068 - MER66A LTR ERV1 -10 468 186 1823 26 0 18 chr2 247350786 247351015 -3336839 - L1P3 LINE L1 -403 5769 5545 201 305 21 70 chr2 247351113 247351300 -3336554 - L2 LINE L2 -241 3031 2854 749 268 16 16 chr2 247351479 247351673 -3336181 + MIR SINE MIR 17 210 -52 2153 126 0 14 chr2 247351986 247352280 -3335574 + AluSx SINE Alu 1 290 -22 1234 208 13 8 chr2 247352301 247352537 -3335317 - AluJb SINE Alu -5 307 71 27 0 0 0 chr2 247352599 247352626 -3335228 + AT_rich Low_complexity Low_complexity 1 27 0 2271 74 3 80 chr2 247352686 247353025 -3334829 + AluSp SINE Alu 1 313 0 22 0 0 0 chr2 247353240 247353262 -3334592 + AT_rich Low_complexity Low_complexity 1 22 0 251 203 16 62 chr2 247353496 247353560 -3334294 - MIR SINE MIR -109 153 93 837 220 78 91 chr2 247355645 247356155 -3331699 + MLT1D LTR MaLR 1 372 -2 305 326 167 16 chr2 247356537 247356782 -3331072 + L2 LINE L2 3006 3287 -26 374 205 24 0 chr2 247356862 247356945 -3330909 + LTR16C LTR ERVL 96 180 -311 4404 162 44 56 chr2 247358717 247358903 -3328951 + L1MCa LINE L1 1 188 -6238 1388 37 0 0 chr2 247358903 247359066 -3328788 + L1PA7 LINE L1 5988 6150 -4 4404 162 44 56 chr2 247359066 247359866 -3327988 + L1MCa LINE L1 188 975 -5451 1975 241 9 76 chr2 247359843 247360487 -3327367 + L1M4 LINE L1 3533 4133 -2293 * 2366 143 15 23 chr2 247360491 247360865 -3326989 + L1MC/D LINE L1 5191 5562 -782 2192 115 40 37 chr2 247360865 247361239 -3326615 + THE1C LTR MaLR 1 375 0 2366 143 15 23 chr2 247361239 247361339 -3326515 + L1MC/D LINE L1 5562 5661 -683 567 221 92 72 chr2 247361339 247361741 -3326113 + MLT1D LTR MaLR 27 467 0 1474 262 120 11 chr2 247361941 247362574 -3325280 - L1ME2 LINE L1 -10 6154 5453 217 334 38 110 chr2 247362760 247363077 -3324777 - L2 LINE L2 -85 3187 2894 379 331 103 36 chr2 247364199 247364501 -3323353 + L2 LINE L2 2890 3211 -102 341 311 12 36 chr2 247364709 247364813 -3323041 - L1ME LINE L1 -379 5742 5642 2267 108 3 0 chr2 247364813 247365120 -3322734 + AluSg1 SINE Alu 1 308 -1 341 311 12 36 chr2 247365120 247365182 -3322672 - L1ME LINE L1 -479 5642 5580 182 213 82 33 chr2 247365192 247365253 -3322601 + MIR SINE MIR 32 95 -113 377 330 32 32 chr2 247365679 247365867 -3321987 - L2 LINE L2 -630 2684 2497 785 242 223 31 chr2 247365868 247365923 -3321931 + MLT1H1 LTR MaLR 1 44 -511 2407 166 31 10 chr2 247365923 247366340 -3321514 + MSTB LTR MaLR 1 426 0 785 242 223 31 chr2 247366340 247366705 -3321149 + MLT1H1 LTR MaLR 44 502 -53 238 226 0 0 chr2 247366908 247366961 -3320893 + MLT1F LTR MaLR 1 53 -502 646 188 138 69 chr2 247366964 247367240 -3320614 + MLT1F LTR MaLR 239 533 -9 1607 276 88 20 chr2 247367252 247367965 -3319889 - L2 LINE L2 -826 2488 1727 287 301 208 27 chr2 247368225 247368588 -3319266 - L2 LINE L2 -1547 1767 1321 2059 129 20 0 chr2 247368588 247368882 -3318972 + AluSx SINE Alu 1 300 -12 287 301 208 27 chr2 247368882 247368927 -3318927 - L2 LINE L2 -1993 1321 1285 305 194 15 15 chr2 247370917 247370984 -3316870 + MLT1I LTR MaLR 343 409 0 849 241 17 42 chr2 247371132 247371369 -3316485 - MIR SINE MIR -31 231 1 426 220 10 0 chr2 247371744 247371844 -3316010 + LTR43 LTR ERV1 187 287 -315 2141 129 7 3 chr2 247372667 247372970 -3314884 - AluJb SINE Alu -8 304 1 257 299 75 0 chr2 247373062 247373169 -3314685 - MIR SINE MIR -78 130 16 738 253 193 26 chr2 247373497 247373885 -3313969 - MLT1C LTR MaLR -52 453 1 367 352 60 6 chr2 247375145 247375327 -3312527 - MIR SINE MIR -70 192 1 4255 134 30 65 chr2 247376046 247376860 -3310994 - LTR1 LTR ERV1 0 785 1 341 242 0 34 chr2 247378318 247378409 -3309445 - L1ME3A LINE L1 -12 6158 6071 435 294 89 0 chr2 247378640 247378786 -3309068 + MER5B DNA MER1_type 17 175 -3 1997 170 45 24 chr2 247378934 247379316 -3308538 - MLT1B LTR MaLR 0 390 1 239 314 51 51 chr2 247381145 247381381 -3306473 + L1MC/D LINE L1 4861 5096 -1050 698 241 75 18 chr2 247381390 247381713 -3306141 - MSTC LTR MaLR 0 428 14 236 194 42 14 chr2 247382017 247382089 -3305765 + L1ME4a LINE L1 6046 6119 -2 * 450 298 118 13 chr2 247382084 247382322 -3305532 + L1ME3A LINE L1 5895 6157 -13 325 333 0 0 chr2 247382352 247382442 -3305412 + L1MC4 LINE L1 6614 6703 -1339 498 17 0 0 chr2 247382444 247382503 -3305351 + (GA)n Simple_repeat Simple_repeat 2 60 0 871 81 0 0 chr2 247382503 247382614 -3305240 - AluSc SINE Alu -34 275 165 407 304 91 44 chr2 247382652 247382991 -3304863 + L1MC/D LINE L1 5255 5609 -750 187 333 43 8 chr2 247383204 247383321 -3304533 + L2 LINE L2 2605 2725 -589 544 306 6 17 chr2 247384069 247384249 -3303605 + MER45A DNA AcHobo 1 178 0 1474 180 69 0 chr2 247386182 247386532 -3301322 - LTR1 LTR ERV1 -6 779 406 806 183 0 0 chr2 247387019 247387150 -3300704 + FLAM_C SINE Alu 2 132 -1 4040 89 14 5 chr2 247387170 247388265 -3299589 + L1PA4 LINE L1 4844 5946 -209 235 349 53 5 chr2 247388840 247389029 -3298825 - MIR3 SINE MIR -7 201 4 363 221 8 118 chr2 247389328 247389455 -3298399 + MER81 DNA DNA 2 114 0 258 233 56 33 chr2 247390194 247390284 -3297570 - LTR33 LTR ERVL -126 395 304 355 237 64 51 chr2 247390539 247390695 -3297159 - LTR16A LTR ERVL -292 158 1 382 227 158 30 chr2 247390768 247390971 -3296883 - LTR33 LTR ERVL -291 230 2 447 236 12 16 chr2 247391178 247391423 -3296431 + (CA)n Simple_repeat Simple_repeat 1 244 0 672 306 82 74 chr2 247391442 247392117 -3295737 - L1M4 LINE L1 -2644 3502 2748 603 247 67 21 chr2 247392496 247392801 -3295053 + MLT1A1 LTR MaLR 5 365 0 2202 83 17 0 chr2 247393360 247393649 -3294205 - AluSg1 SINE Alu -15 294 1 465 346 104 13 chr2 247393668 247393977 -3293877 - L1M4 LINE L1 -3678 2468 2132 1529 161 0 11 chr2 247394219 247394479 -3293375 - AluJo SINE Alu -55 257 1 226 324 27 101 chr2 247394682 247394830 -3293024 - L2 LINE L2 -3 3269 3133 1889 179 22 25 chr2 247394856 247395214 -3292640 - MLT1A1 LTR MaLR 0 365 9 357 280 42 42 chr2 247395326 247395494 -3292360 - HAL1b LINE L1 -572 776 609 814 109 20 30 chr2 247414434 247414478 -3273376 - THE1C LTR MaLR -265 110 67 2457 139 16 3 chr2 247414478 247414846 -3273008 + THE1C LTR MaLR 1 373 -2 814 109 20 30 chr2 247414846 247414957 -3272897 - THE1C LTR MaLR -308 67 1 10320 118 27 33 chr2 247414957 247416546 -3271308 - MSTA-int LTR MaLR 0 1580 1 2003 139 177 14 chr2 247416546 247416914 -3270940 - MSTA LTR MaLR 0 428 1 197 281 98 0 chr2 247417010 247417092 -3270762 + MIR3 SINE MIR 112 201 -7 210 245 0 20 chr2 247417420 247417469 -3270385 + GA-rich Low_complexity Low_complexity 4 51 0 1550 178 7 21 chr2 247418561 247418848 -3269006 - AluJb SINE Alu -20 292 10 192 40 0 0 chr2 247418984 247419009 -3268845 + (TC)n Simple_repeat Simple_repeat 2 26 0 521 297 95 14 chr2 247419618 247419840 -3268014 + MLT1I LTR MaLR 102 341 -68 351 331 21 14 chr2 247419889 247420034 -3267820 - L1M4 LINE L1 -1033 5113 4968 2028 128 0 25 chr2 247420645 247420964 -3266890 + AluY SINE Alu 1 311 0 831 150 0 50 chr2 247421351 247421491 -3266363 - FLAM_C SINE Alu 0 133 1 210 328 26 4 chr2 247422752 247422849 -3265005 + MIR SINE MIR 20 119 -109 203 204 0 23 chr2 247424216 247424260 -3263594 + MIR SINE MIR 18 60 -148 240 338 69 15 chr2 247424603 247424807 -3263047 - L2 LINE L2 -218 3054 2840 875 105 29 17 chr2 247425873 247426045 -3261809 + (CACCAT)n Simple_repeat Simple_repeat 6 179 0 256 306 0 0 chr2 247426072 247426134 -3261720 - L3 LINE CR1 -125 1452 1391 207 0 0 0 chr2 247426153 247426176 -3261678 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 363 176 74 65 chr2 247426203 247426311 -3261543 - MSTB2 LTR MaLR -5 452 344 269 334 13 3 chr2 247426430 247426540 -3261314 + MIR SINE MIR 23 132 -76 223 177 0 25 chr2 247428790 247428869 -3258985 + (TA)n Simple_repeat Simple_repeat 2 78 0 221 277 158 0 chr2 247428871 247428972 -3258882 - MIR SINE MIR -50 212 96 609 207 53 13 chr2 247429009 247429159 -3258695 - MLT1H1 LTR MaLR 0 590 435 354 23 0 0 chr2 247429608 247429651 -3258203 + (TC)n Simple_repeat Simple_repeat 1 43 0 903 251 24 65 chr2 247429651 247429951 -3257903 - MLT1H1 LTR MaLR -297 293 3 4483 211 18 35 chr2 247430025 247431254 -3256600 + L1MB8 LINE L1 2859 4066 -2080 1083 170 16 9 chr2 247431260 247431576 -3256278 + L1MB8 LINE L1 5147 5465 -709 1424 190 8 0 chr2 247431583 247431841 -3256013 + L1MB8 LINE L1 5738 5997 -187 5615 70 29 3 chr2 247431882 247432635 -3255219 - LTR17 LTR ERV1 -7 773 1 327 155 13 187 chr2 247432643 247432733 -3255121 + L1MB8 LINE L1 6046 6100 -78 1802 170 82 18 chr2 247432733 247433074 -3254780 - MLT1A1 LTR MaLR -2 363 1 327 155 13 187 chr2 247433074 247433138 -3254716 + L1MB8 LINE L1 6100 6173 -5 360 236 8 15 chr2 247433147 247433247 -3254607 - MLT1H1 LTR MaLR -471 84 1 2302 116 0 0 chr2 247433325 247433635 -3254219 + AluSq SINE Alu 2 311 -2 943 180 120 5 chr2 247433658 247433858 -3253996 + MER58A DNA MER1_type 2 224 0 272 246 126 37 chr2 247434320 247434538 -3253316 - MLT1D LTR MaLR -163 304 64 189 206 22 109 chr2 247436467 247436559 -3251295 + MIR SINE MIR 63 146 -116 304 322 133 3 chr2 247436693 247437010 -3250844 + HAL1 LINE L1 11 368 -2139 797 142 124 18 chr2 247437291 247437460 -3250394 - MER53 DNA DNA 0 189 3 273 29 0 0 chr2 247437468 247437502 -3250352 + (CA)n Simple_repeat Simple_repeat 1 34 0 250 262 24 56 chr2 247437515 247437641 -3250213 + HAL1 LINE L1 807 928 -1579 1098 276 149 22 chr2 247437702 247437857 -3249997 + HAL1 LINE L1 1379 1513 -994 2107 118 0 33 chr2 247437857 247438162 -3249692 + AluSg SINE Alu 1 295 -15 1098 276 149 22 chr2 247438162 247438744 -3249110 + HAL1 LINE L1 1513 2210 -297 273 98 0 0 chr2 247438744 247438785 -3249069 + (TG)n Simple_repeat Simple_repeat 2 42 0 217 177 0 32 chr2 247438786 247438805 -3249049 + GA-rich Low_complexity Low_complexity 2 20 -41 2291 102 0 13 chr2 247438805 247439109 -3248745 + AluSq SINE Alu 1 300 -13 217 177 0 32 chr2 247439109 247439151 -3248703 + GA-rich Low_complexity Low_complexity 20 61 0 360 299 22 0 chr2 247439199 247439333 -3248521 + HAL1 LINE L1 2271 2407 -100 786 219 73 0 chr2 247439723 247439915 -3247939 - MLT1D LTR MaLR -6 499 294 314 146 0 0 chr2 247439913 247439968 -3247886 - MLT1D LTR MaLR -367 138 84 * 1710 217 8 19 chr2 247439968 247440337 -3247517 + MLT1A1 LTR MaLR 1 365 0 1520 116 116 44 chr2 247440337 247440630 -3247224 + MER1B DNA MER1_type 3 316 -23 289 217 60 24 chr2 247440653 247440736 -3247118 - MLT1D LTR MaLR -419 86 1 371 244 92 10 chr2 247440747 247440975 -3246879 + MLT1D LTR MaLR 212 498 -7 699 193 37 6 chr2 247442749 247442910 -3244944 + MER45 DNA AcHobo 1 166 -787 2149 125 10 3 chr2 247443386 247443682 -3244172 - AluSx SINE Alu -14 298 1 392 239 12 0 chr2 247443727 247443819 -3244035 + MIR SINE MIR 63 156 -52 419 221 8 0 chr2 247443936 247444058 -3243796 + (CA)n Simple_repeat Simple_repeat 1 123 0 771 217 4 0 chr2 247444077 247444360 -3243494 + (CA)n Simple_repeat Simple_repeat 1 284 0 233 208 21 0 chr2 247445121 247445169 -3242685 - MIR SINE MIR -59 149 101 2919 10 0 0 chr2 247445404 247445715 -3242139 - AluYa5 SINE Alu 0 311 1 2469 65 10 0 chr2 247446739 247447032 -3240822 + AluSg SINE Alu 1 296 -14 240 234 16 0 chr2 247447747 247447811 -3240043 + Charlie5 DNA MER1_type 2501 2565 -47 213 285 134 21 chr2 247448276 247448462 -3239392 + L2 LINE L2 3035 3241 -72 2188 167 53 34 chr2 247449722 247449868 -3237986 + MER65A LTR ERV1 2 144 -301 2271 110 7 3 chr2 247449868 247450169 -3237685 + AluSx SINE Alu 1 302 -10 2188 167 53 34 chr2 247450169 247450458 -3237396 + MER65A LTR ERV1 144 445 0 320 355 9 0 chr2 247451008 247451118 -3236736 - MIR3 SINE MIR -53 155 45 4789 198 65 47 chr2 247452595 247452699 -3235155 + L1MDa LINE L1 25 126 -6414 1814 163 10 13 chr2 247452699 247453006 -3234848 + AluJo SINE Alu 5 310 -2 4789 198 65 47 chr2 247453006 247454726 -3233128 + L1MDa LINE L1 126 2281 -4259 1816 161 10 30 chr2 247455596 247455900 -3231954 + AluJo SINE Alu 1 298 -14 1089 185 13 40 chr2 247456060 247456301 -3231553 + MER77 LTR ERV1 396 680 -6 189 74 0 0 chr2 247457560 247457587 -3230267 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 664 234 79 25 chr2 247458637 247459054 -3228800 - MLT1C LTR MaLR 0 467 7 519 42 52 74 chr2 247459403 247459723 -3228131 + (TG)n Simple_repeat Simple_repeat 1 312 0 414 76 59 61 chr2 247459764 247460263 -3227591 + (TG)n Simple_repeat Simple_repeat 1 498 0 304 71 49 77 chr2 247460329 247460512 -3227342 + (TG)n Simple_repeat Simple_repeat 2 179 0 340 61 50 77 chr2 247460578 247460759 -3227095 + (TG)n Simple_repeat Simple_repeat 2 177 0 473 79 67 52 chr2 247460855 247461468 -3226386 + (TG)n Simple_repeat Simple_repeat 1 622 0 1150 219 42 72 chr2 247461630 247462032 -3225822 - MLT1B LTR MaLR 0 390 1 1140 94 0 24 chr2 247462098 247462268 -3225586 + MER30B DNA MER1_type 4 169 -21 23 33 0 0 chr2 247462380 247462410 -3225444 + AT_rich Low_complexity Low_complexity 1 30 0 195 83 42 21 chr2 247462586 247462634 -3225220 + (CA)n Simple_repeat Simple_repeat 1 49 0 378 357 41 15 chr2 247463065 247463407 -3224447 - Charlie8 DNA MER1_type -855 1562 1212 462 241 17 26 chr2 247464635 247464751 -3223103 + MIR SINE MIR 66 180 -82 2548 69 0 7 chr2 247464916 247465222 -3222632 + AluY SINE Alu 1 304 -7 258 265 60 8 chr2 247465723 247465840 -3222014 + L1ME LINE L1 573 695 -5424 915 276 64 0 chr2 247465887 247466217 -3221637 + L1ME3 LINE L1 5731 6081 -81 475 261 28 78 chr2 247466323 247466503 -3221351 + L1ME LINE L1 917 1087 -5032 1108 246 41 43 chr2 247466535 247466776 -3221078 + L1ME LINE L1 2114 2354 -3775 1523 127 13 9 chr2 247466776 247467004 -3220850 + AluSg/x SINE Alu 81 309 -1 1108 246 41 43 chr2 247467004 247467253 -3220601 + L1ME LINE L1 2354 2603 -3526 725 208 112 69 chr2 247467258 247467633 -3220221 + L1ME LINE L1 2728 3118 -3011 426 287 8 8 chr2 247467713 247467842 -3220012 + MLT1-int LTR MaLR 756 884 -487 623 229 4 114 chr2 247467988 247468224 -3219630 + MLT1-int LTR MaLR 991 1200 -171 2241 139 58 3 chr2 247468318 247468664 -3219190 - MLT1A1 LTR MaLR 0 365 1 2298 124 0 0 chr2 247468788 247469094 -3218760 + AluSx SINE Alu 1 306 -6 540 312 173 34 chr2 247469141 247469381 -3218473 + L2 LINE L2 2253 2458 -814 2468 54 40 3 chr2 247469381 247469677 -3218177 - AluY SINE Alu -4 307 1 540 312 173 34 chr2 247469677 247470136 -3217718 + L2 LINE L2 2458 3050 -222 270 161 81 32 chr2 247470215 247470277 -3217577 + L2 LINE L2 3208 3272 0 182 342 66 0 chr2 247470277 247470353 -3217501 - MIR SINE MIR -70 192 112 351 349 32 28 chr2 247471551 247471800 -3216054 + L1M2a LINE L1 405 654 -6912 * 4426 229 33 18 chr2 247471798 247473168 -3214686 + L1M2a LINE L1 2097 3395 -4171 584 165 0 0 chr2 247473174 247473259 -3214595 + AluJ/FLAM SINE Alu 6 90 -222 * 731 161 42 0 chr2 247473258 247473376 -3214478 + FLAM_A SINE Alu 7 129 -13 2932 204 33 28 chr2 247473387 247474397 -3213457 + L1M2a LINE L1 3344 4354 -3211 1363 162 85 8 chr2 247474398 247474633 -3213221 + AluJo SINE Alu 47 299 -13 4567 191 28 37 chr2 247474640 247475729 -3212125 + L1M2a LINE L1 4335 5349 -2216 215 79 26 0 chr2 247475729 247475767 -3212087 + (TA)n Simple_repeat Simple_repeat 2 40 0 4567 191 28 37 chr2 247475767 247476010 -3211844 + L1M2a LINE L1 5349 5593 -1972 4127 197 82 57 chr2 247476130 247476570 -3211284 + L1MDa LINE L1 482 910 -5630 252 70 0 23 chr2 247476570 247476613 -3211241 + (TTTA)n Simple_repeat Simple_repeat 3 148 0 1962 117 0 41 chr2 247476613 247476904 -3210950 - AluSc SINE Alu -1 321 1 711 144 68 0 chr2 247476911 247477057 -3210797 - L1MA5A LINE L1 0 6297 6142 4127 197 82 57 chr2 247477057 247477628 -3210226 + L1MDa LINE L1 915 1470 -5070 2407 78 30 0 chr2 247477628 247477923 -3209931 + AluSp SINE Alu 1 304 -9 4127 197 82 57 chr2 247477923 247478268 -3209586 + L1MDa LINE L1 1470 2106 -4434 342 105 444 8 chr2 247478563 247478687 -3209167 + MER53 DNA DNA 3 180 -9 1250 172 73 97 chr2 247478761 247478905 -3208949 + MLT1A1 LTR MaLR 3 149 -216 1523 170 16 56 chr2 247478905 247479211 -3208643 + AluJb SINE Alu 1 294 -18 1250 172 73 97 chr2 247479211 247479438 -3208416 + MLT1A1 LTR MaLR 149 365 0 231 246 14 14 chr2 247481533 247481602 -3206252 + MER104 DNA Tc2 33 101 -79 342 361 41 9 chr2 247481652 247481871 -3205983 - MIR SINE MIR -32 230 5 4381 194 16 17 chr2 247482048 247482540 -3205314 + L1MB7 LINE L1 4353 4844 -1340 2313 117 7 0 chr2 247482540 247482847 -3205007 - AluSx SINE Alu -3 309 1 4381 194 16 17 chr2 247482847 247484178 -3203676 + L1MB7 LINE L1 4844 6169 -15 1961 161 0 23 chr2 247484234 247484544 -3203310 + AluJo SINE Alu 3 305 -7 244 409 27 0 chr2 247484752 247484862 -3202992 + L2 LINE L2 2646 2758 -556 469 267 48 67 chr2 247484879 247484962 -3202892 - MER5B DNA MER1_type -16 162 82 1691 210 54 36 chr2 247484962 247485458 -3202396 + MLT1D LTR MaLR 1 505 0 469 267 48 67 chr2 247485458 247485539 -3202315 - MER5B DNA MER1_type -96 82 1 2163 124 24 0 chr2 247486176 247486467 -3201387 + AluSx SINE Alu 1 298 -14 1099 347 63 29 chr2 247486579 247487265 -3200589 + ERVL LTR ERVL 1164 1872 -3892 391 200 10 40 chr2 247487341 247487441 -3200413 + LTR41 LTR ERVL 91 187 -586 6275 166 70 9 chr2 247489388 247490620 -3197234 - L1M1 LINE L1 -4065 1263 240 1788 120 91 26 chr2 247490620 247490971 -3196883 + THE1C LTR MaLR 1 374 -1 6275 166 70 9 chr2 247490971 247491225 -3196629 - L1M1 LINE L1 -5088 240 3 1121 264 196 63 chr2 247491926 247492465 -3195389 - HAL1 LINE L1 -205 2302 1836 1801 163 44 0 chr2 247492465 247492759 -3195095 + AluJb SINE Alu 1 307 -5 1121 264 196 63 chr2 247492759 247493108 -3194746 - HAL1 LINE L1 -671 1836 1296 325 167 13 64 chr2 247493455 247493533 -3194321 - HAL1 LINE L1 -1804 703 630 829 287 152 14 chr2 247493581 247493943 -3193911 - HAL1 LINE L1 -2059 448 37 597 248 22 0 chr2 247493945 247494082 -3193772 - MLT1J LTR MaLR -371 140 1 180 0 0 0 chr2 247496798 247496818 -3191036 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1787 162 11 0 chr2 247501189 247501460 -3186394 + AluJb SINE Alu 9 282 -30 1741 302 96 42 chr2 247502383 247504047 -3183807 + L1MC4 LINE L1 3589 4863 -1283 2262 86 35 0 chr2 247504047 247504337 -3183517 + AluSx SINE Alu 1 300 -12 1741 302 96 42 chr2 247504337 247504909 -3182945 + L1MC4 LINE L1 4863 5403 -743 2214 131 6 10 chr2 247505024 247505337 -3182517 + AluSx SINE Alu 1 312 0 1876 242 110 2 chr2 247505992 247506530 -3181324 + L1MC4 LINE L1 6494 7089 -953 813 257 50 4 chr2 247506530 247506791 -3181063 + L1MC4a LINE L1 7158 7430 -378 2502 63 0 3 chr2 247507959 247508259 -3179595 + AluY SINE Alu 1 299 -12 2276 103 0 3 chr2 247508929 247509230 -3178624 + AluSc SINE Alu 1 300 -9 1016 181 16 0 chr2 247509782 247509970 -3177884 + AluJo SINE Alu 120 310 -2 491 301 57 53 chr2 247510147 247510409 -3177445 + L1M4 LINE L1 3029 3291 -2855 266 274 53 18 chr2 247512485 247512598 -3175256 - MIR SINE MIR -75 133 17 756 141 39 0 chr2 247513038 247513166 -3174688 + FLAM_A SINE Alu 1 133 0 2351 87 3 10 chr2 247513412 247513722 -3174132 + AluSc SINE Alu 1 308 -1 13117 128 67 11 chr2 247514367 247516505 -3171349 + Tigger1 DNA MER2_type 3 2278 -140 2442 66 0 23 chr2 247516505 247516808 -3171046 - AluY SINE Alu -15 296 1 13117 128 67 11 chr2 247516808 247516958 -3170896 + Tigger1 DNA MER2_type 2278 2418 0 214 188 116 43 chr2 247517136 247517205 -3170649 + MIR SINE MIR 17 90 -172 2056 101 7 27 chr2 247517861 247518159 -3169695 + AluSq SINE Alu 1 292 -21 263 259 93 46 chr2 247518342 247518450 -3169404 + L2 LINE L2 3200 3312 -1 22 80 0 0 chr2 247519777 247519827 -3168027 + GC_rich Low_complexity Low_complexity 1 50 0 422 198 0 11 chr2 247520613 247520704 -3167150 + L1M3 LINE L1 5733 5822 -349 * 1749 182 50 18 chr2 247520697 247521081 -3166773 + L1MB2 LINE L1 5769 6164 -7 271 258 54 0 chr2 247521101 247521194 -3166660 - MER5B DNA MER1_type -78 100 3 201 375 75 0 chr2 247521518 247521638 -3166216 - MIR SINE MIR -108 154 26 333 289 82 0 chr2 247521973 247522132 -3165722 + L1ME LINE L1 5557 5728 -393 201 292 115 0 chr2 247522669 247522765 -3165089 + MIR SINE MIR 77 183 -79 813 249 134 35 chr2 247524240 247524582 -3163272 + MLT1D LTR MaLR 12 387 -118 278 244 35 0 chr2 247526218 247526304 -3161550 + L1MEd LINE L1 107 195 -6010 727 226 0 0 chr2 247526583 247526716 -3161138 + FLAM_C SINE Alu 2 134 -9 4482 160 25 13 chr2 247526716 247527555 -3160299 + L1MB2 LINE L1 5323 6171 0 517 305 51 0 chr2 247527693 247527870 -3159984 + L1MEd LINE L1 596 781 -5424 227 295 21 32 chr2 247527989 247528084 -3159770 - L2 LINE L2 -40 3273 3180 604 286 91 54 chr2 247528897 247529045 -3158809 + L1MEd LINE L1 1011 1152 -5244 1710 172 0 46 chr2 247529045 247529370 -3158484 + AluJo SINE Alu 1 310 -2 604 286 91 54 chr2 247529370 247529834 -3158020 + L1MEd LINE L1 1152 1646 -4750 3376 210 78 58 chr2 247529965 247531059 -3156795 + LTR28 LTR ERV1 1 1750 -5 305 102 0 0 chr2 247531553 247531602 -3156252 + L1MA1 LINE L1 6254 6302 0 1662 141 3 102 chr2 247532024 247532229 -3155625 - AluJo SINE Alu -11 301 140 374 0 22 0 chr2 247532229 247532275 -3155579 + (TG)n Simple_repeat Simple_repeat 2 48 0 1662 141 3 102 chr2 247532275 247532403 -3155451 - AluJo SINE Alu -172 140 1 425 304 86 26 chr2 247532413 247532697 -3155157 + L1MEd LINE L1 2297 2779 -3436 3844 166 13 15 chr2 247532697 247533348 -3154506 + L1MB2 LINE L1 5485 6136 -35 2309 97 0 7 chr2 247533348 247533638 -3154216 + AluSx SINE Alu 3 290 -22 3844 166 13 15 chr2 247533638 247533673 -3154181 + L1MB2 LINE L1 6136 6170 -1 535 122 12 0 chr2 247533707 247533789 -3154065 - U6 snRNA snRNA -4 103 21 241 318 101 5 chr2 247533867 247534056 -3153798 + L1MEd LINE L1 2791 2997 -3218 201 39 0 0 chr2 247534276 247534302 -3153552 + (CA)n Simple_repeat Simple_repeat 2 27 0 2313 82 21 7 chr2 247535312 247535603 -3152251 - AluSx SINE Alu -17 295 1 800 195 157 15 chr2 247535656 247535917 -3151937 + MER63 DNA MER1_type 633 930 -130 1115 162 145 4 chr2 247536780 247537021 -3150833 + ORSL DNA AcHobo 1 275 0 472 297 94 38 chr2 247538159 247538425 -3149429 - L3 LINE CR1 -99 1478 1198 183 80 0 0 chr2 247539312 247539337 -3148517 + (TCC)n Simple_repeat Simple_repeat 2 26 0 2535 87 0 0 chr2 247540709 247541018 -3146836 - AluSx SINE Alu -3 309 1 257 299 75 0 chr2 247541110 247541217 -3146637 - MIR SINE MIR -78 130 16 738 253 193 26 chr2 247541545 247541933 -3145921 - MLT1C LTR MaLR -52 453 1 893 224 122 32 chr2 247543335 247543804 -3144050 + L1MC4 LINE L1 7530 8040 -2 1862 161 0 0 chr2 247543830 247544116 -3143738 - AluJb SINE Alu -12 300 15 21 0 0 0 chr2 247544384 247544405 -3143449 + AT_rich Low_complexity Low_complexity 1 21 0 713 224 0 7 chr2 247544808 247544955 -3142899 - L1PB4 LINE L1 0 6156 6011 350 268 32 32 chr2 247544962 247545085 -3142769 + Charlie8 DNA MER1_type 140 262 -2155 433 315 101 33 chr2 247545087 247545363 -3142491 - HAL1 LINE L1 -1454 1053 759 2044 62 12 0 chr2 247545899 247546142 -3141712 - AluSq SINE Alu -67 246 1 512 159 189 15 chr2 247546302 247546434 -3141420 + MIR SINE MIR 108 262 0 2272 116 0 0 chr2 247547258 247547551 -3140303 - AluSx SINE Alu -19 293 1 1112 149 23 0 chr2 247547642 247547816 -3140038 - AluSg/x SINE Alu -1 311 134 1738 115 8 0 chr2 247547816 247548051 -3139803 - AluSg/x SINE Alu -10 302 66 1112 200 3 42 chr2 247548513 247548823 -3139031 - AluSx SINE Alu -9 303 6 746 284 89 34 chr2 247549996 247550592 -3137262 + L1MC4a LINE L1 5298 5926 -1882 441 0 0 0 chr2 247551318 247551367 -3136487 + (TTA)n Simple_repeat Simple_repeat 2 50 0 1611 166 26 15 chr2 247551374 247551645 -3136209 - AluJb SINE Alu -36 276 3 2184 113 7 7 chr2 247551663 247551972 -3135882 - AluSq SINE Alu -4 309 1 2502 87 0 0 chr2 247553874 247554183 -3133671 + AluSg SINE Alu 1 309 -1 207 223 0 74 chr2 247556075 247556196 -3131658 + C-rich Low_complexity Low_complexity 3 114 0 7754 25 9 0 chr2 247557589 247558896 -3128958 - L1PA4 LINE L1 0 6155 4844 801 183 0 0 chr2 247558916 247559047 -3128807 - FLAM_C SINE Alu -1 132 2 222 204 37 0 chr2 247559380 247559434 -3128420 + MIR SINE MIR 195 250 -12 4379 209 56 36 chr2 247559452 247559926 -3127928 + L1MD1 LINE L1 4257 4720 -1522 2147 107 11 0 chr2 247559926 247560206 -3127648 - AluSx SINE Alu -22 290 8 4379 209 56 36 chr2 247560206 247561253 -3126601 + L1MD1 LINE L1 4720 5745 -497 2280 90 3 13 chr2 247561253 247561553 -3126301 + AluSp SINE Alu 1 297 -16 4379 209 56 36 chr2 247561553 247561918 -3125936 + L1MD1 LINE L1 5745 6182 -60 756 156 33 8 chr2 247561918 247562040 -3125814 - FLAM_A SINE Alu -7 126 2 4379 209 56 36 chr2 247562040 247562098 -3125756 + L1MD1 LINE L1 6182 6237 -5 1919 168 0 16 chr2 247562873 247563188 -3124666 + AluSx SINE Alu 1 310 -2 571 229 140 11 chr2 247563297 247563476 -3124378 + MIR SINE MIR 60 261 -1 2218 124 0 0 chr2 247564342 247564664 -3123190 - AluSx SINE Alu 0 322 1 30 27 0 0 chr2 247564669 247564706 -3123148 + AT_rich Low_complexity Low_complexity 1 37 0 606 168 126 26 chr2 247564706 247564897 -3122957 + L1PB4 LINE L1 5957 6166 0 1652 137 27 131 chr2 247565197 247565534 -3122320 + AluJb SINE Alu 1 302 0 2277 110 0 3 chr2 247565737 247566038 -3121816 - AluSx SINE Alu -12 300 1 1745 175 14 24 chr2 247566040 247566331 -3121523 - AluJo SINE Alu -24 288 1 664 274 73 29 chr2 247566331 247566645 -3121209 - L1ME3A LINE L1 -295 5875 5548 422 285 172 18 chr2 247566911 247567132 -3120722 + MIR SINE MIR 6 260 -2 2451 156 17 36 chr2 247567410 247567517 -3120337 + MER65C LTR ERV1 3 111 -350 2415 93 0 0 chr2 247567517 247567818 -3120036 + AluSx SINE Alu 1 301 -11 2451 156 17 36 chr2 247567818 247568178 -3119676 + MER65C LTR ERV1 111 461 0 1160 203 17 0 chr2 247568209 247568446 -3119408 + MER34 LTR ERV1 1 241 -301 415 154 0 0 chr2 247568448 247568513 -3119341 + Charlie3 DNA MER1_type 2642 2706 -4 356 301 52 39 chr2 247568548 247568701 -3119153 - L1ME3A LINE L1 -2064 4082 3928 2592 58 0 3 chr2 247568814 247569126 -3118728 + AluY SINE Alu 1 311 0 1837 115 11 52 chr2 247569447 247569733 -3118121 + AluSg SINE Alu 1 274 -36 468 51 0 0 chr2 247569733 247569792 -3118062 + (CATA)n Simple_repeat Simple_repeat 1 59 0 346 327 44 24 chr2 247569836 247570041 -3117813 + L1MEc LINE L1 92 300 -6096 339 276 17 23 chr2 247570089 247570266 -3117588 + L1MEc LINE L1 2100 2236 -3981 240 330 43 0 chr2 247570483 247570598 -3117256 + L1MC/D LINE L1 5617 5736 -2072 209 161 0 0 chr2 247570774 247570805 -3117049 - L2 LINE L2 -16 3256 3226 358 310 71 13 chr2 247571605 247571831 -3116023 - HAL1b LINE L1 -807 541 303 189 139 0 0 chr2 247572975 247573018 -3114836 + (A)n Simple_repeat Simple_repeat 1 43 0 354 252 89 44 chr2 247573889 247574024 -3113830 - MER5B DNA MER1_type -18 160 20 235 294 63 14 chr2 247574788 247574931 -3112923 - L2 LINE L2 -167 3146 2997 339 409 23 0 chr2 247575517 247575693 -3112161 + L1M4 LINE L1 3693 3872 -2274 289 169 68 0 chr2 247575737 247575796 -3112058 + L2 LINE L2 3210 3272 0 413 228 113 67 chr2 247575816 247576058 -3111796 + L1MEc LINE L1 3071 3329 -2886 266 0 29 0 chr2 247576082 247576116 -3111738 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 189 0 0 0 chr2 247576115 247576136 -3111718 + (CTAAA)n Simple_repeat Simple_repeat 3 23 0 * 607 266 95 28 chr2 247576213 247576712 -3111142 + L1MEc LINE L1 3494 4030 -2185 1003 135 45 6 chr2 247576726 247576904 -3110950 + AluJb SINE Alu 126 310 -2 274 301 35 21 chr2 247576911 247577054 -3110800 + L1MEc LINE L1 4144 4288 -1927 495 286 160 0 chr2 247577075 247577288 -3110566 + MIR SINE MIR 16 262 0 321 347 31 16 chr2 247577357 247577757 -3110097 + L1MEc LINE L1 4387 4849 -1366 1575 215 34 21 chr2 247577777 247578103 -3109751 + MER58B DNA MER1_type 12 341 0 514 283 122 31 chr2 247578107 247578461 -3109393 + L1MEc LINE L1 4884 5269 -946 21473 60 0 1 chr2 247578461 247581998 -3105856 + L1PA6 LINE L1 2612 6153 -1 1219 197 62 13 chr2 247582216 247582525 -3105329 - MER33 DNA MER1_type 0 324 1 386 330 30 20 chr2 247582579 247582782 -3105072 - HAL1b LINE L1 -769 579 375 328 270 5 5 chr2 247583656 247583880 -3103974 + (CA)n Simple_repeat Simple_repeat 1 224 0 1049 215 177 24 chr2 247583881 247584313 -3103541 + L1MC4a LINE L1 6614 6999 -809 401 313 83 27 chr2 247584343 247584724 -3103130 + L1MD3 LINE L1 7275 7772 -223 2240 85 0 7 chr2 247585157 247585451 -3102403 + AluSq SINE Alu 1 292 -21 291 283 108 8 chr2 247586308 247586428 -3101426 + MIR SINE MIR 14 145 -117 2328 87 0 6 chr2 247586935 247587247 -3100607 - AluSg SINE Alu 0 310 1 2100 67 46 14 chr2 247587880 247588165 -3099689 - AluY SINE Alu -17 294 1 1640 164 20 3 chr2 247588444 247588749 -3099105 - AluJo SINE Alu -2 310 1 307 160 46 153 chr2 247589339 247589470 -3098384 + L1 LINE L1 3071 3187 -2959 2131 124 3 0 chr2 247590141 247590448 -3097406 - AluSg SINE Alu -2 308 1 622 318 119 35 chr2 247590616 247591179 -3096675 + L1ME1 LINE L1 2806 3415 -2731 834 245 150 21 chr2 247591467 247591794 -3096060 + MLT1J LTR MaLR 143 511 0 695 328 74 45 chr2 247591820 247592305 -3095549 - L2 LINE L2 -1107 2207 1709 312 315 36 27 chr2 247592305 247592416 -3095438 + L1ME1 LINE L1 4584 4695 -1451 1646 130 11 8 chr2 247592817 247593078 -3094776 + AluJb SINE Alu 35 296 -16 837 200 123 0 chr2 247593164 247593241 -3094613 + L1ME1 LINE L1 5364 5430 -725 2032 91 11 7 chr2 247593241 247593526 -3094328 - AluSc SINE Alu -23 286 1 837 200 123 0 chr2 247593526 247593650 -3094204 + L1ME1 LINE L1 5430 5588 -567 800 152 8 0 chr2 247593651 247593783 -3094071 - FLAM_C SINE Alu -10 133 1 1951 193 12 57 chr2 247593788 247593855 -3093999 + L1ME1 LINE L1 5575 5643 -523 2774 155 52 26 chr2 247593855 247594391 -3093463 + MER44D DNA MER2_type 1 605 0 1951 193 12 57 chr2 247594391 247594856 -3092998 + L1ME1 LINE L1 5643 6001 -165 320 279 70 36 chr2 247594854 247595005 -3092849 + L1MC4 LINE L1 5495 5656 -514 * 758 205 89 32 chr2 247595011 247595201 -3092653 + MER58A DNA MER1_type 7 207 -17 266 157 39 0 chr2 247595269 247595320 -3092534 + L1MC4 LINE L1 5704 5756 -2052 1688 178 11 0 chr2 247595586 247595873 -3091981 - AluSx SINE Alu -22 290 1 25 0 0 0 chr2 247595875 247595900 -3091954 + AT_rich Low_complexity Low_complexity 1 25 0 908 45 0 0 chr2 247595903 247596014 -3091840 + AluY SINE Alu 186 296 -15 2363 70 0 0 chr2 247597050 247597350 -3090504 + AluY SINE Alu 1 300 -11 1353 160 0 0 chr2 247597616 247597829 -3090025 - AluJb SINE Alu -15 297 85 532 285 127 65 chr2 247598684 247599290 -3088564 + L1MC4 LINE L1 5737 6304 -1504 2079 90 3 3 chr2 247599290 247599579 -3088275 + AluSg SINE Alu 1 289 -21 240 59 0 0 chr2 247599584 247599618 -3088236 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 532 285 127 65 chr2 247599618 247600162 -3087692 + L1MC4 LINE L1 6307 6911 -897 1951 140 0 0 chr2 247600165 247600457 -3087397 + AluSx SINE Alu 1 292 -20 246 315 93 0 chr2 247600520 247600628 -3087226 + L1MC5 LINE L1 6976 7093 -868 199 185 0 111 chr2 247600680 247600734 -3087120 - L3b LINE CR1 -5 1578 1531 498 188 0 0 chr2 247602301 247602402 -3085452 + (CA)n Simple_repeat Simple_repeat 1 101 0 1308 272 156 7 chr2 247602722 247603440 -3084414 + L2 LINE L2 361 1185 -2129 404 251 169 16 chr2 247603520 247603703 -3084151 - MER20 DNA MER1_type -8 211 1 473 259 189 19 chr2 247603857 247604116 -3083738 + L2 LINE L2 1547 1849 -1465 2080 115 7 3 chr2 247604153 247604449 -3083405 - AluSx SINE Alu -15 297 1 415 264 178 25 chr2 247605925 247606088 -3081766 + L1ME4a LINE L1 5932 6119 -2 2276 74 3 0 chr2 247606310 247606616 -3081238 + AluSp SINE Alu 1 307 0 2036 102 0 0 chr2 247609928 247610202 -3077652 - AluSx SINE Alu 0 312 39 2245 107 0 0 chr2 247610657 247610967 -3076887 + AluSg SINE Alu 1 310 0 452 240 27 41 chr2 247611059 247611205 -3076649 + L1M4 LINE L1 3999 4142 -2004 1559 136 15 33 chr2 247611513 247611785 -3076069 - AluJo SINE Alu -17 295 29 272 242 0 30 chr2 247612235 247612301 -3075553 + L2 LINE L2 3209 3272 0 226 115 39 19 chr2 247614375 247614427 -3073427 + (TGAA)n Simple_repeat Simple_repeat 4 56 0 267 190 43 35 chr2 247614954 247615070 -3072784 + (CGCGG)n Simple_repeat Simple_repeat 5 121 0 288 211 11 44 chr2 247615934 247616024 -3071830 - MIR3 SINE MIR -8 200 114 191 326 56 22 chr2 247616598 247616687 -3071167 + MIR3 SINE MIR 113 204 -4 475 277 48 2 chr2 247617851 247618049 -3069805 + L1ME3A LINE L1 5899 6109 -53 2105 124 7 0 chr2 247619212 247619519 -3068335 - AluSx SINE Alu -3 309 1 733 264 66 5 chr2 247619566 247619763 -3068091 - MIR SINE MIR -46 216 8 460 275 276 2 chr2 247619916 247620237 -3067617 + L2 LINE L2 2602 3016 -297 362 242 92 17 chr2 247620890 247621010 -3066844 + L2 LINE L2 3149 3277 -36 311 193 57 34 chr2 247621221 247621309 -3066545 - L2 LINE L2 -51 3262 3173 221 264 256 16 chr2 247621412 247621728 -3066126 - L2 LINE L2 -333 2980 2590 334 290 85 23 chr2 247621824 247622109 -3065745 - L1MC/D LINE L1 -745 5425 5323 2512 71 0 0 chr2 247622379 247622674 -3065180 + AluSc SINE Alu 1 295 -14 439 206 16 56 chr2 247622681 247622807 -3065047 - HAL1b LINE L1 -893 455 335 289 145 12 5 chr2 247624925 247625173 -3062681 + AluJo SINE Alu 21 301 -1 218 81 27 0 chr2 247625173 247625210 -3062644 + (GA)n Simple_repeat Simple_repeat 1 38 0 484 262 43 21 chr2 247626918 247627059 -3060795 + MER20 DNA MER1_type 1 144 -75 1706 136 4 0 chr2 247627634 247627869 -3059985 - AluJo SINE Alu -76 236 1 521 318 89 25 chr2 247628162 247628486 -3059368 - Charlie7 DNA MER1_type -1915 697 353 2487 73 0 7 chr2 247629310 247629613 -3058241 + AluSc SINE Alu 1 301 -8 1317 110 0 0 chr2 247629613 247629777 -3058077 + AluSq SINE Alu 134 297 -16 2547 128 56 2 chr2 247631137 247631598 -3056256 - LTR19A LTR ERV1 0 486 1 1199 181 45 13 chr2 247633093 247633482 -3054372 - LTR47A LTR ERVL 0 452 1 2106 114 6 38 chr2 247636204 247636520 -3051334 - AluSx SINE Alu -6 306 1 352 203 0 0 chr2 247636858 247636927 -3050927 + AluJ/FLAM SINE Alu 3 71 -231 2195 98 3 7 chr2 247637045 247637342 -3050512 + AluSc SINE Alu 1 296 -13 1759 163 6 53 chr2 247638307 247638626 -3049228 + AluJo SINE Alu 1 304 -8 301 206 16 24 chr2 247639195 247639321 -3048533 + CT-rich Low_complexity Low_complexity 3 127 0 2330 91 3 0 chr2 247642691 247642987 -3044867 + AluSx SINE Alu 1 297 -15 2495 89 0 0 chr2 247645473 247645776 -3042078 + AluSx SINE Alu 1 303 -9 212 311 0 40 chr2 247648477 247648551 -3039303 - MER91A DNA MER1_type -125 71 1 294 158 158 0 chr2 247653165 247653285 -3034569 - THE1C LTR MaLR 0 375 237 1655 173 13 32 chr2 247654644 247654956 -3032898 + AluJo SINE Alu 1 306 -6 1418 172 137 0 chr2 247654956 247655212 -3032642 + AluJo SINE Alu 1 291 -21 2332 89 3 0 chr2 247655219 247655510 -3032344 + AluSc SINE Alu 1 292 -17 2177 137 3 0 chr2 247656314 247656621 -3031233 + AluSx SINE Alu 1 308 -4 212 348 25 25 chr2 247656708 247656826 -3031028 + MIR SINE MIR 14 131 -131 24 0 0 0 chr2 247657046 247657070 -3030784 + AT_rich Low_complexity Low_complexity 1 24 0 441 333 66 14 chr2 247657076 247657282 -3030572 + L1MC4 LINE L1 7695 7914 -128 1860 164 3 7 chr2 247657282 247657569 -3030285 + AluJo SINE Alu 2 287 -25 1021 130 0 0 chr2 247657580 247657718 -3030136 + AluSg/x SINE Alu 136 273 -39 218 28 0 56 chr2 247657718 247657754 -3030100 + (TCTCTG)n Simple_repeat Simple_repeat 2 35 0 204 40 0 0 chr2 247657768 247657793 -3030061 + (CA)n Simple_repeat Simple_repeat 2 26 0 303 214 136 0 chr2 247657802 247657905 -3029949 + L1MC4 LINE L1 7926 8042 0 230 273 106 30 chr2 247658900 247659032 -3028822 - MIR SINE MIR -90 172 31 758 303 132 48 chr2 247660332 247661148 -3026706 + L2 LINE L2 1889 2773 -541 1936 126 36 4 chr2 247662511 247662789 -3025065 + AluSx SINE Alu 1 287 -25 190 263 0 0 chr2 247666737 247666775 -3021079 - MIR SINE MIR -136 72 35 2328 77 0 59 chr2 247667101 247667424 -3020430 - AluSc SINE Alu -5 304 1 372 320 16 31 chr2 247668837 247668965 -3018889 - L2 LINE L2 0 3272 3147 387 317 0 19 chr2 247669317 247669672 -3018182 + CT-rich Low_complexity Low_complexity 1 348 0 3804 164 19 10 chr2 247670301 247671033 -3016821 + L1MB3 LINE L1 5444 6182 -1 265 232 134 0 chr2 247671053 247671165 -3016689 - L3 LINE CR1 -44 1533 1407 199 309 11 53 chr2 247671154 247671248 -3016606 - L2 LINE L2 -3 3269 3180 * 2190 112 3 0 chr2 247673700 247674004 -3013850 + AluSc SINE Alu 1 305 -4 2106 136 0 0 chr2 247674234 247674543 -3013311 + AluSx SINE Alu 1 309 -3 2007 141 0 0 chr2 247675223 247675520 -3012334 + AluSx SINE Alu 1 297 -15 2040 135 6 3 chr2 247675884 247676195 -3011659 - AluJb SINE Alu 0 312 1 180 200 0 100 chr2 247676296 247676356 -3011498 - L2 LINE L2 -86 3186 3133 268 301 6 25 chr2 247677539 247677702 -3010152 + C-rich Low_complexity Low_complexity 3 162 0 * 359 168 12 98 chr2 247677630 247677803 -3010051 + (CCCGG)n Simple_repeat Simple_repeat 3 160 0 32 0 0 0 chr2 247678004 247678036 -3009818 + GC_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr2 247678153 247678181 -3009673 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 247678253 247678275 -3009579 + GC_rich Low_complexity Low_complexity 1 22 0 1939 124 0 0 chr2 247678813 247679104 -3008750 - AluSx SINE Alu -17 295 5 603 241 7 0 chr2 247679107 247679252 -3008602 - L1MDa LINE L1 -4573 2034 1889 1646 106 0 4 chr2 247679418 247679653 -3008201 + AluSg/x SINE Alu 67 300 -12 2089 134 0 0 chr2 247679659 247679965 -3007889 + AluSx SINE Alu 5 310 -2 486 281 93 5 chr2 247679965 247680185 -3007669 - L1MDa LINE L1 -4649 1777 1420 2611 210 67 40 chr2 247680190 247680621 -3007233 - L1ME1 LINE L1 -15 6155 5737 2027 145 0 0 chr2 247680621 247680917 -3006937 + AluSx SINE Alu 1 296 -16 2611 210 67 40 chr2 247680917 247681149 -3006705 - L1ME1 LINE L1 -433 5737 5513 2258 102 3 10 chr2 247681149 247681463 -3006391 - AluSq SINE Alu -1 312 1 2611 210 67 40 chr2 247681463 247681500 -3006354 - L1ME1 LINE L1 -657 5513 5478 2073 89 4 4 chr2 247681500 247681780 -3006074 - AluY SINE Alu -31 280 1 2611 210 67 40 chr2 247681780 247681997 -3005857 - L1ME1 LINE L1 -692 5478 5276 4915 162 24 41 chr2 247685312 247685734 -3002120 - L1MA9 LINE L1 -6 6306 5878 2364 96 0 0 chr2 247685734 247686046 -3001808 - AluSx SINE Alu 0 312 1 4915 162 24 41 chr2 247686046 247686330 -3001524 - L1MA9 LINE L1 -434 5878 5591 2039 133 7 0 chr2 247686330 247686639 -3001215 + AluSx SINE Alu 1 311 -1 4915 162 24 41 chr2 247686639 247687384 -3000470 - L1MA9 LINE L1 -721 5591 4876 1487 191 3 52 chr2 247687384 247687549 -3000305 - AluJo SINE Alu -18 294 149 2109 118 0 10 chr2 247687549 247687854 -3000000 - AluSx SINE Alu -10 302 1 1487 191 3 52 chr2 247687854 247687997 -2999857 - AluJo SINE Alu -163 149 1 4915 162 24 41 chr2 247687997 247688029 -2999825 - L1MA9 LINE L1 -1436 4876 4845 2267 75 0 0 chr2 247688328 247688620 -2999234 + AluY SINE Alu 1 292 -19 252 0 0 0 chr2 247688979 247689007 -2998847 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1585 270 56 73 chr2 247689009 247689691 -2998163 + HERVL LTR ERVL 597 1266 -3730 4012 312 94 43 chr2 247689765 247690721 -2997133 + HERVL LTR ERVL 1573 2479 -3175 2050 108 16 29 chr2 247690721 247691036 -2996818 + AluSx SINE Alu 1 311 -1 4012 312 94 43 chr2 247691036 247692164 -2995690 + HERVL LTR ERVL 2479 3548 -2106 2444 187 50 40 chr2 247692164 247692479 -2995375 - MLT1D LTR MaLR 0 505 182 2288 85 3 10 chr2 247692479 247692786 -2995068 - AluSq SINE Alu -8 305 1 2444 187 50 40 chr2 247692786 247692968 -2994886 - MLT1D LTR MaLR -323 182 3 4012 312 94 43 chr2 247692968 247694057 -2993797 + HERVL LTR ERVL 3548 4898 -756 308 304 78 0 chr2 247694314 247694429 -2993425 + HERVL LTR ERVL 5229 5352 -412 333 0 0 0 chr2 247694730 247694767 -2993087 + (CA)n Simple_repeat Simple_repeat 1 37 0 183 74 0 0 chr2 247695839 247695847 -2992007 + (TTG)n Simple_repeat Simple_repeat 2 9 -19 2168 94 28 0 chr2 247695847 247696135 -2991719 + AluSc SINE Alu 1 296 -13 183 74 0 0 chr2 247696135 247696153 -2991701 + (TTG)n Simple_repeat Simple_repeat 8 28 0 368 260 73 11 chr2 247696982 247697143 -2990711 - L1ME4a LINE L1 0 6097 1182 2121 106 0 3 chr2 247697200 247697493 -2990361 - AluSq SINE Alu -21 292 1 547 222 7 44 chr2 247698302 247698437 -2989417 - MER63 DNA MER1_type -80 756 1 2272 99 0 6 chr2 247699020 247699332 -2988522 - AluSx SINE Alu -2 310 1 1714 86 0 41 chr2 247699356 247699601 -2988253 - AluSx SINE Alu -77 235 1 525 198 0 0 chr2 247699913 247700009 -2987845 - MER58C DNA MER1_type 0 215 120 2363 65 0 7 chr2 247700256 247700566 -2987288 + AluY SINE Alu 1 308 -3 531 233 0 0 chr2 247702939 247703042 -2984812 + FRAM SINE Alu 17 119 -57 945 121 0 17 chr2 247703058 247703231 -2984623 + (GAA)n Simple_repeat Simple_repeat 2 171 0 865 162 73 34 chr2 247703944 247704148 -2983706 - THE1C LTR MaLR -163 212 1 312 86 0 136 chr2 247704763 247704822 -2983032 + L1MD3 LINE L1 7919 7966 -29 2414 54 0 0 chr2 247704822 247705120 -2982734 + AluY SINE Alu 1 298 -13 312 86 0 136 chr2 247705120 247705141 -2982713 + L1MD3 LINE L1 7966 7988 -7 220 289 252 3 chr2 247705411 247705705 -2982149 + L2 LINE L2 1806 2172 -1142 529 293 88 8 chr2 247705907 247706171 -2981683 + L2 LINE L2 2732 3016 -297 1870 228 139 4 chr2 247706187 247706682 -2981172 - MLT1F1 LTR MaLR 0 567 6 193 146 36 73 chr2 247706769 247706824 -2981030 + L2 LINE L2 3172 3224 -89 2260 82 0 0 chr2 247706889 247707182 -2980672 - AluY SINE Alu -18 293 1 22 0 0 0 chr2 247707603 247707625 -2980229 + AT_rich Low_complexity Low_complexity 1 22 0 2361 69 13 3 chr2 247708703 247709009 -2978845 - AluSq SINE Alu 0 313 5 25 0 0 0 chr2 247709791 247709816 -2978038 + AT_rich Low_complexity Low_complexity 1 25 0 317 240 84 39 chr2 247711321 247711500 -2976354 - HAL1 LINE L1 -301 2206 2020 273 357 0 0 chr2 247712912 247713038 -2974816 + G-rich Low_complexity Low_complexity 1 126 0 186 103 0 0 chr2 247713364 247713393 -2974461 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 219 69 0 0 chr2 247713395 247713424 -2974430 + (CGGA)n Simple_repeat Simple_repeat 2 30 0 23 54 0 0 chr2 247713501 247713538 -2974316 + GC_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr2 247713650 247713674 -2974180 + GC_rich Low_complexity Low_complexity 1 24 0 39 50 0 0 chr2 247714265 247714325 -2973529 + GC_rich Low_complexity Low_complexity 1 60 0 1578 192 126 39 chr2 247717216 247717653 -2970201 - MLT1D LTR MaLR 0 505 31 865 317 155 41 chr2 247717671 247718604 -2969250 + L2 LINE L2 1461 2540 -774 2236 71 0 3 chr2 247718604 247718938 -2968916 - AluY SINE Alu 0 311 2 865 317 155 41 chr2 247718938 247719105 -2968749 + L2 LINE L2 2540 2687 -627 182 62 31 0 chr2 247721958 247721990 -2965864 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr2 247722335 247722365 -2965489 + GC_rich Low_complexity Low_complexity 1 30 0 201 232 61 73 chr2 247722501 247722583 -2965271 - L2 LINE L2 -20 3252 3172 434 327 114 51 chr2 247723093 247723382 -2964472 + L2 LINE L2 1716 1985 -1329 1780 175 0 7 chr2 247723382 247723668 -2964186 + AluJo SINE Alu 5 288 -24 434 327 114 51 chr2 247723668 247723756 -2964098 + L2 LINE L2 1985 2066 -1248 1670 147 65 27 chr2 247723756 247724049 -2963805 - AluJb SINE Alu -7 305 2 434 327 114 51 chr2 247724049 247724362 -2963492 + L2 LINE L2 2066 2451 -863 243 309 0 0 chr2 247724924 247724992 -2962862 - L2 LINE L2 -2 3270 3203 2524 81 3 3 chr2 247725054 247725364 -2962490 - AluSq SINE Alu -3 310 1 286 273 118 9 chr2 247725439 247725549 -2962305 + MIR SINE MIR 103 224 -38 249 211 19 10 chr2 247725648 247725752 -2962102 + CT-rich Low_complexity Low_complexity 1 105 0 320 204 75 43 chr2 247726873 247726966 -2960888 - L2 LINE L2 -221 3051 2956 610 271 70 55 chr2 247727425 247727753 -2960101 - MLT1E LTR MaLR -6 587 285 233 282 118 9 chr2 247727810 247727920 -2959934 - MLT1E LTR MaLR -420 122 1 231 114 0 0 chr2 247728334 247728369 -2959485 + REP3 LTR ERV 26 60 -502 454 249 206 5 chr2 247728513 247728702 -2959152 + REP3 LTR ERV 336 562 0 331 324 58 0 chr2 247729275 247729414 -2958440 - L1ME2 LINE L1 -29 6135 5989 2312 105 3 16 chr2 247729489 247729804 -2958050 - AluSq SINE Alu -2 311 1 2456 71 0 0 chr2 247730111 247730407 -2957447 + AluY SINE Alu 1 296 -15 414 171 0 9 chr2 247730443 247730653 -2957201 + AluJo SINE Alu 2 300 -12 545 170 0 32 chr2 247730857 247730951 -2956903 + FRAM SINE Alu 65 155 -21 857 219 96 56 chr2 247731252 247731522 -2956332 + AluJo SINE Alu 1 281 -31 1507 189 71 0 chr2 247731637 247731917 -2955937 - AluJo SINE Alu -10 302 3 293 193 0 0 chr2 247732166 247732223 -2955631 + AluJ/FLAM SINE Alu 2 58 -244 3688 161 106 43 chr2 247732257 247733223 -2954631 + MER52C LTR ERV1 95 1270 -8 684 138 8 77 chr2 247733223 247733353 -2954501 + FRAM SINE Alu 46 166 -10 4316 177 52 28 chr2 247733846 247735594 -2952260 - L1MB8 LINE L1 -42 6136 4351 2453 86 0 3 chr2 247735911 247736212 -2951642 - AluSx SINE Alu -12 300 1 32 26 0 0 chr2 247736473 247736512 -2951342 + AT_rich Low_complexity Low_complexity 1 39 0 635 182 0 0 chr2 247736521 247736620 -2951234 - AluJ/FLAM SINE Alu -212 100 2 1282 160 17 39 chr2 247736637 247736868 -2950986 - AluJb SINE Alu -86 226 1 27 100 0 0 chr2 247736902 247736992 -2950862 + AT_rich Low_complexity Low_complexity 1 90 0 885 109 0 0 chr2 247737077 247737205 -2950649 + L1M3 LINE L1 5537 5664 -516 1860 109 0 0 chr2 247737208 247737447 -2950407 + AluSq SINE Alu 1 239 -74 5394 40 4 1 chr2 247737554 247738627 -2949227 + L1P1 LINE L1 4698 5773 -382 2239 86 7 0 chr2 247739070 247739396 -2948458 - AluSg SINE Alu 0 328 1 327 227 64 55 chr2 247739413 247739523 -2948331 + L1ME LINE L1 5635 5745 -376 892 247 44 7 chr2 247739543 247739818 -2948036 - Charlie1b DNA MER1_type -199 324 40 484 288 194 25 chr2 247739913 247740168 -2947686 - L2 LINE L2 -602 2712 2405 2738 96 6 3 chr2 247740168 247740531 -2947323 - THE1B LTR MaLR 0 364 1 484 288 194 25 chr2 247740531 247740553 -2947301 - L2 LINE L2 -909 2405 2388 645 76 0 0 chr2 247740837 247740916 -2946938 - AluSg SINE Alu -230 80 2 235 258 0 16 chr2 247740990 247741064 -2946790 - THE1-int LTR MaLR -1478 102 40 1637 207 10 3 chr2 247741068 247741372 -2946482 - AluJo SINE Alu -6 306 1 346 181 126 172 chr2 247741416 247741631 -2946223 - MLT1F1 LTR MaLR -2 553 349 18884 116 29 15 chr2 247741631 247744637 -2943217 + L1M1 LINE L1 35 3080 -4485 1719 188 11 3 chr2 247744637 247744924 -2942930 + AluJo SINE Alu 1 289 -23 4113 182 22 52 chr2 247744932 247745408 -2942446 + L1M1 LINE L1 3464 3952 -3613 2343 112 3 0 chr2 247745408 247745720 -2942134 + AluSq SINE Alu 1 313 0 4113 182 22 52 chr2 247745720 247746238 -2941616 + L1M1 LINE L1 3952 4484 -3081 1916 156 0 0 chr2 247746238 247746541 -2941313 + AluSx SINE Alu 1 303 0 4113 182 22 52 chr2 247746541 247746566 -2941288 + L1M1 LINE L1 4484 4508 -3057 2241 67 53 0 chr2 247746566 247746849 -2941005 + AluY SINE Alu 14 311 0 4113 182 22 52 chr2 247746849 247747035 -2940819 + L1M1 LINE L1 4508 4631 -2934 1371 122 5 11 chr2 247747035 247747223 -2940631 + AluSq SINE Alu 1 187 -126 21187 89 24 4 chr2 247747338 247750420 -2937434 + HERVFH19I LTR ERV1 1676 4819 -2900 503 269 145 16 chr2 247750710 247750903 -2936951 + MIR SINE MIR 45 262 0 236 289 276 13 chr2 247751025 247751326 -2936528 + L2 LINE L2 2301 2680 -634 319 314 61 36 chr2 247752247 247752644 -2935210 - L2 LINE L2 -255 3058 2558 2307 106 0 7 chr2 247753330 247753633 -2934221 - AluSx SINE Alu -11 301 1 239 299 106 111 chr2 247753911 247754163 -2933691 - L2 LINE L2 0 3313 3062 1995 110 107 0 chr2 247754163 247754444 -2933410 - AluSx SINE Alu -1 311 1 239 299 106 111 chr2 247754444 247754595 -2933259 - L2 LINE L2 -251 3062 2912 919 179 6 0 chr2 247754831 247754993 -2932861 - FAM SINE Alu -8 167 5 1929 168 0 0 chr2 247757351 247757642 -2930212 + AluJo SINE Alu 1 291 -21 566 290 70 19 chr2 247757829 247758043 -2929811 - L1MC/D LINE L1 -2054 5754 5530 22 35 0 0 chr2 247758073 247758102 -2929752 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr2 247758137 247758169 -2929685 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr2 247759385 247759413 -2928441 + AT_rich Low_complexity Low_complexity 1 28 0 2008 131 21 3 chr2 247759480 247759771 -2928083 + AluSx SINE Alu 1 296 -16 2243 123 0 3 chr2 247759916 247760216 -2927638 - AluSx SINE Alu -13 299 1 1465 94 10 30 chr2 247760412 247760615 -2927239 + AluSq SINE Alu 5 203 -110 20791 79 2 9 chr2 247760715 247763370 -2924484 + HERVFH19I LTR ERV1 4895 7530 -189 2463 57 0 38 chr2 247763370 247763686 -2924168 - AluY SINE Alu -7 304 1 20791 79 2 9 chr2 247763686 247763875 -2923979 + HERVFH19I LTR ERV1 7530 7719 0 1994 144 178 10 chr2 247763875 247764291 -2923563 + LTR19A LTR ERV1 1 486 0 2525 191 87 4 chr2 247764403 247764964 -2922890 - MER90 LTR ERV1 -2 612 5 29 84 0 0 chr2 247765423 247765494 -2922360 + GC_rich Low_complexity Low_complexity 1 71 0 25 75 0 0 chr2 247765531 247765584 -2922270 + GC_rich Low_complexity Low_complexity 1 53 0 25 75 0 0 chr2 247765767 247765820 -2922034 + GC_rich Low_complexity Low_complexity 1 53 0 25 31 0 0 chr2 247766033 247766065 -2921789 + GC_rich Low_complexity Low_complexity 1 32 0 226 304 119 54 chr2 247766560 247766728 -2921126 - MER5A DNA MER1_type -10 179 1 2195 104 24 0 chr2 247766962 247767259 -2920595 - AluSq SINE Alu -9 304 1 443 256 91 55 chr2 247767748 247767947 -2919907 + L3 LINE CR1 607 812 -765 250 286 264 22 chr2 247768186 247768364 -2919490 + MIR SINE MIR 34 254 -8 1764 163 7 10 chr2 247768370 247768664 -2919190 - AluJb SINE Alu -19 293 1 305 200 0 94 chr2 247769263 247769348 -2918506 + AluSp SINE Alu 120 196 -107 347 276 118 13 chr2 247769270 247769287 -2918567 + L1MC4a LINE L1 5026 5040 -1106 688 171 0 50 chr2 247769287 247769427 -2918427 + FLAM_C SINE Alu 1 133 0 347 276 118 13 chr2 247769427 247769723 -2918131 + L1MC4a LINE L1 5040 5252 -894 574 330 204 22 chr2 247769731 247770143 -2917711 + L1MC4a LINE L1 5434 5920 -1888 1846 153 0 13 chr2 247770663 247770964 -2916890 + AluJo SINE Alu 1 297 -15 250 217 33 109 chr2 247771112 247771204 -2916650 + MIR SINE MIR 164 248 -14 * 706 185 191 21 chr2 247771185 247771374 -2916480 + MIR SINE MIR 8 228 -34 222 297 51 72 chr2 247771519 247771657 -2916197 + L3 LINE CR1 1095 1229 -348 1717 159 28 0 chr2 247771990 247772279 -2915575 - AluSx SINE Alu -15 297 1 180 97 0 0 chr2 247772805 247772836 -2915018 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 1746 159 0 24 chr2 247772838 247773133 -2914721 - AluJo SINE Alu -24 288 1 1499 186 65 0 chr2 247773213 247773492 -2914362 + AluJb SINE Alu 6 302 -10 32 0 0 0 chr2 247773656 247773688 -2914166 + AT_rich Low_complexity Low_complexity 1 32 0 1547 161 24 12 chr2 247774273 247774528 -2913326 - AluSx SINE Alu -20 292 35 309 308 62 41 chr2 247775459 247775605 -2912249 - L2 LINE L2 -1 3271 3123 2271 106 0 0 chr2 247775606 247775917 -2911937 + AluSq SINE Alu 1 311 -2 339 311 30 0 chr2 247775982 247776114 -2911740 - L2 LINE L2 -336 2977 2842 * 587 324 38 9 chr2 247776105 247776318 -2911536 - MIR SINE MIR -27 235 17 342 231 125 10 chr2 247777615 247777719 -2910135 + MIR3 SINE MIR 81 196 -12 1833 160 10 23 chr2 247781490 247781797 -2906057 - AluSx SINE Alu -9 303 1 228 67 0 0 chr2 247782304 247782334 -2905520 + (T)n Simple_repeat Simple_repeat 1 30 0 325 338 57 77 chr2 247783847 247784199 -2903655 + L1ME LINE L1 672 1016 -5054 372 268 55 0 chr2 247784214 247784341 -2903513 + L1MD2 LINE L1 361 494 -6227 * 2227 227 117 32 chr2 247784338 247784969 -2902885 + L1MD2 LINE L1 1007 1583 -4957 1631 112 123 11 chr2 247784969 247785237 -2902617 + AluSg1 SINE Alu 1 298 -11 2227 227 117 32 chr2 247785237 247785666 -2902188 + L1MD2 LINE L1 1583 1974 -4566 1653 174 10 19 chr2 247785666 247785803 -2902051 + AluJo SINE Alu 1 138 -174 2342 70 3 3 chr2 247785803 247786102 -2901752 + AluY SINE Alu 1 299 -12 1653 174 10 19 chr2 247786102 247786275 -2901579 + AluJo SINE Alu 138 308 -4 2227 227 117 32 chr2 247786275 247786417 -2901437 + L1MD2 LINE L1 1974 2401 -4139 1019 248 42 78 chr2 247786419 247786445 -2901409 + L1M4 LINE L1 3 28 -6514 2175 118 0 0 chr2 247786445 247786742 -2901112 - AluSx SINE Alu -15 297 1 1019 248 42 78 chr2 247786742 247786924 -2900930 + L1M4 LINE L1 28 215 -6327 2131 120 7 3 chr2 247786924 247787233 -2900621 - AluSp SINE Alu -2 311 2 1019 248 42 78 chr2 247787233 247787377 -2900477 + L1M4 LINE L1 215 339 -6203 1981 107 4 0 chr2 247787377 247787649 -2900205 - AluSx SINE Alu -39 273 1 1019 248 42 78 chr2 247787649 247787742 -2900112 + L1M4 LINE L1 339 434 -6108 1272 211 141 17 chr2 247787788 247788004 -2899850 + L1M4 LINE L1 4837 5025 -1619 2382 105 54 20 chr2 247788004 247788356 -2899498 + THE1B LTR MaLR 1 364 0 1272 211 141 17 chr2 247788356 247788599 -2899255 + L1M4 LINE L1 5025 5353 -1291 564 191 0 9 chr2 247788600 247788705 -2899149 - FLAM_A SINE Alu -14 128 25 1974 133 0 13 chr2 247788725 247789026 -2898828 - AluJb SINE Alu -15 297 1 1537 112 9 0 chr2 247789152 247789366 -2898488 + AluSg/x SINE Alu 87 302 -10 872 161 43 6 chr2 247789382 247789543 -2898311 + L1MB7 LINE L1 5999 6165 -19 766 245 150 3 chr2 247789548 247790033 -2897821 + L1MD2 LINE L1 2385 2942 -3598 2178 222 71 7 chr2 247790051 247790640 -2897214 + L1MD2 LINE L1 5994 6620 -133 2003 108 11 0 chr2 247790669 247790946 -2896908 - AluSg SINE Alu -30 280 1 281 177 16 16 chr2 247790946 247791008 -2896846 + L1MD1 LINE L1 6099 6160 -82 1587 86 0 5 chr2 247791009 247791219 -2896635 - AluSp SINE Alu -2 311 103 755 101 70 39 chr2 247791226 247791355 -2896499 - AluSp SINE Alu -180 133 1 337 159 72 0 chr2 247791356 247791425 -2896429 + L1MD2 LINE L1 6677 6750 -3 1760 123 32 18 chr2 247791435 247791712 -2896142 + AluJb SINE Alu 1 281 -31 252 0 0 0 chr2 247791715 247791743 -2896111 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 606 301 155 45 chr2 247791760 247791797 -2896057 + L1MEc LINE L1 1042 1074 -5322 2259 105 0 0 chr2 247791797 247792103 -2895751 + AluSx SINE Alu 1 306 -6 606 301 155 45 chr2 247792103 247792440 -2895414 + L1MEc LINE L1 1074 1457 -4939 812 163 15 0 chr2 247792443 247792578 -2895276 - BC200 scRNA scRNA -63 137 1 440 265 99 20 chr2 247792578 247792880 -2894974 + L1MEc LINE L1 1443 1768 -4628 673 247 142 0 chr2 247792881 247793071 -2894783 - MER20 DNA MER1_type 0 219 3 328 233 103 9 chr2 247793088 247793204 -2894650 - L1MEd LINE L1 -5041 1078 952 1343 154 102 9 chr2 247793220 247793544 -2894310 - L1MC1 LINE L1 -6 6327 5974 23 0 0 0 chr2 247793620 247793643 -2894211 + AT_rich Low_complexity Low_complexity 1 23 0 2113 93 8 30 chr2 247793708 247794074 -2893780 - pTR5 LTR ERV1 -2016 422 65 288 250 10 20 chr2 247794074 247794174 -2893680 - LTR30 LTR ERV1 -80 642 544 3092 149 33 37 chr2 247794174 247794985 -2892869 - pTR5 LTR ERV1 -413 2025 743 2114 124 0 10 chr2 247795531 247795837 -2892017 - AluSx SINE Alu -7 305 3 338 290 76 0 chr2 247797114 247797245 -2890609 + MER3 DNA MER1_type 63 203 -6 456 238 246 6 chr2 247797324 247797672 -2890182 + L2 LINE L2 2674 3104 -209 417 189 8 12 chr2 247799740 247799990 -2887864 + (CA)n Simple_repeat Simple_repeat 1 249 0 392 214 6 0 chr2 247800033 247800211 -2887643 + (CA)n Simple_repeat Simple_repeat 2 180 0 428 204 6 0 chr2 247800224 247800400 -2887454 + (CA)n Simple_repeat Simple_repeat 2 178 0 433 225 10 0 chr2 247800465 247800980 -2886874 + (CA)n Simple_repeat Simple_repeat 1 520 0 420 20 0 0 chr2 247801127 247801176 -2886678 + (CACTC)n Simple_repeat Simple_repeat 4 52 0 506 353 0 0 chr2 247802051 247802409 -2885445 + (CA)n Simple_repeat Simple_repeat 1 358 0 387 248 56 32 chr2 247803505 247803630 -2884224 - MIR SINE MIR -61 147 20 467 262 82 12 chr2 247803693 247804053 -2883801 + LTR40a LTR ERVL 57 503 -1 258 254 15 0 chr2 247805076 247805143 -2882711 + MIR SINE MIR 97 164 -98 1902 117 18 0 chr2 247805244 247805518 -2882336 + AluJb SINE Alu 1 279 -33 191 300 43 0 chr2 247805518 247805588 -2882266 - MIR SINE MIR -129 133 61 396 153 62 45 chr2 247807341 247807518 -2880336 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 265 107 114 0 chr2 247807538 247807687 -2880167 + (TCCA)n Simple_repeat Simple_repeat 3 168 0 400 155 75 40 chr2 247807723 247807897 -2879957 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 248 132 74 16 chr2 247807916 247808037 -2879817 + (TCCA)n Simple_repeat Simple_repeat 1 128 0 377 127 92 6 chr2 247808070 247808391 -2879463 + (TCCA)n Simple_repeat Simple_repeat 1 348 0 240 263 16 70 chr2 247808405 247808591 -2879263 + CT-rich Low_complexity Low_complexity 3 178 0 251 247 236 0 chr2 247808634 247808723 -2879131 - L2 LINE L2 0 3313 3204 430 302 11 11 chr2 247808975 247809154 -2878700 + (CCCCAG)n Simple_repeat Simple_repeat 2 180 0 2068 111 3 0 chr2 247810399 247810687 -2877167 + AluSq SINE Alu 1 289 -24 748 238 121 4 chr2 247811450 247811690 -2876164 - MER58B DNA MER1_type -30 311 44 241 360 47 0 chr2 247812994 247813230 -2874624 + L1M4 LINE L1 2113 2359 -3787 574 283 95 15 chr2 247813241 247813577 -2874277 + L1M4 LINE L1 2473 2835 -3311 943 179 124 0 chr2 247813757 247813958 -2873896 + AluJb SINE Alu 86 311 -1 316 298 8 61 chr2 247814376 247814507 -2873347 + MIR SINE MIR 23 146 -116 208 323 81 6 chr2 247815655 247815785 -2872069 - MIR SINE MIR -61 147 12 2418 78 0 3 chr2 247819140 247819433 -2868421 - AluSq SINE Alu -4 309 18 27 0 0 0 chr2 247819679 247819706 -2868148 + AT_rich Low_complexity Low_complexity 1 27 0 528 264 82 16 chr2 247819974 247820388 -2867466 - LTR33 LTR ERVL -46 475 1 1856 153 104 21 chr2 247820966 247821352 -2866502 + MSTB LTR MaLR 1 418 -8 371 188 50 0 chr2 247822067 247822147 -2865707 + MIR SINE MIR 71 154 -108 2463 72 0 0 chr2 247823872 247824162 -2863692 - AluSx SINE Alu -22 290 1 258 193 0 48 chr2 247825559 247825642 -2862212 + C-rich Low_complexity Low_complexity 3 81 0 22 0 0 0 chr2 247825666 247825688 -2862166 + GC_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 247825784 247825815 -2862039 + GC_rich Low_complexity Low_complexity 1 31 0 24 53 0 0 chr2 247825928 247825966 -2861888 + GC_rich Low_complexity Low_complexity 1 38 0 30 27 0 0 chr2 247830643 247830680 -2857174 + GC_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 247831054 247831075 -2856779 + GC_rich Low_complexity Low_complexity 1 21 0 2537 56 13 0 chr2 247831336 247831638 -2856216 + AluY SINE Alu 1 306 -5 1962 153 0 3 chr2 247831662 247831963 -2855891 - AluJb SINE Alu -11 301 2 2323 112 0 0 chr2 247834204 247834500 -2853354 + AluSx SINE Alu 1 296 -16 2348 102 0 0 chr2 247834699 247834992 -2852862 - AluSg SINE Alu -17 293 1 2304 95 0 3 chr2 247835001 247835307 -2852547 - AluY SINE Alu -6 305 1 408 248 109 22 chr2 247835312 247835449 -2852405 + L1M4 LINE L1 2681 2829 -3317 2246 102 23 3 chr2 247835491 247835794 -2852060 - AluSc SINE Alu 0 309 1 2122 128 13 3 chr2 247835794 247836099 -2851755 - AluSx SINE Alu -4 308 1 204 261 174 0 chr2 247836288 247836357 -2851497 + L2 LINE L2 3195 3275 -38 1342 109 86 38 chr2 247836361 247836571 -2851283 + AluSg/x SINE Alu 75 294 -16 981 228 0 10 chr2 247836571 247836773 -2851081 + AluJo SINE Alu 104 303 -9 2308 78 30 0 chr2 247837203 247837498 -2850356 - AluY SINE Alu -7 304 1 1142 157 32 19 chr2 247838521 247838737 -2849117 + MER20 DNA MER1_type 1 219 0 1751 183 0 3 chr2 247839279 247839564 -2848290 - AluJo SINE Alu -28 284 1 390 206 14 0 chr2 247839985 247840058 -2847796 + Tigger3(Golem) DNA MER2_type 1 74 -2955 811 117 0 39 chr2 247840059 247840187 -2847667 - FLAM_C SINE Alu -20 123 1 1361 137 102 16 chr2 247840187 247840443 -2847411 + Tigger3(Golem) DNA MER2_type 2761 3038 0 2445 83 0 3 chr2 247840711 247841012 -2846842 - AluY SINE Alu -11 300 1 1575 188 36 23 chr2 247841681 247841985 -2845869 + AluJo SINE Alu 1 308 -4 2336 98 7 0 chr2 247842047 247842354 -2845500 + AluSg SINE Alu 1 309 -1 186 196 39 20 chr2 247843273 247843324 -2844530 - L2 LINE L2 -74 3239 3188 307 268 188 0 chr2 247843399 247843511 -2844343 + MIR SINE MIR 20 152 -110 226 372 64 6 chr2 247843646 247843802 -2844052 - MIR3 SINE MIR -26 182 18 1464 42 0 0 chr2 247844382 247844549 -2843305 + AluY SINE Alu 142 308 -3 380 360 128 32 chr2 247845597 247845965 -2841889 - L1MC4a LINE L1 -1 8041 7710 1546 162 71 20 chr2 247845965 247846262 -2841592 - AluJb SINE Alu 0 312 1 380 360 128 32 chr2 247846262 247846771 -2841083 - L1MC4a LINE L1 -332 7710 7029 346 297 31 0 chr2 247846956 247847084 -2840770 - L1MC4 LINE L1 -1003 7039 6908 1532 193 16 51 chr2 247847093 247847404 -2840450 + AluJb SINE Alu 1 300 -12 405 318 84 17 chr2 247847435 247847674 -2840180 - L1MC4a LINE L1 -1102 6706 6452 1665 170 7 31 chr2 247847720 247848008 -2839846 + AluJo SINE Alu 14 294 -18 302 289 47 108 chr2 247848109 247848232 -2839622 - L1MC4a LINE L1 -1543 6265 6161 3345 149 40 21 chr2 247848232 247848890 -2838964 + L1MB3 LINE L1 5512 6181 -2 302 289 47 108 chr2 247848890 247848998 -2838856 - L1MC4a LINE L1 -1647 6161 6048 2335 98 3 0 chr2 247849765 247850060 -2837794 + AluSg SINE Alu 1 296 -14 1038 158 25 0 chr2 247850257 247850415 -2837439 + FAM SINE Alu 10 171 -14 1286 145 134 42 chr2 247850818 247851080 -2836774 + AluJo SINE Alu 17 302 -10 294 257 53 53 chr2 247852132 247852245 -2835609 + MER5B DNA MER1_type 7 119 -59 231 336 71 9 chr2 247852760 247852873 -2834981 - L2 LINE L2 -46 3226 3107 2266 102 3 40 chr2 247853844 247854169 -2833685 + AluSq SINE Alu 1 313 0 2480 96 0 3 chr2 247854735 247855049 -2832805 + AluSq SINE Alu 1 313 0 21 0 0 0 chr2 247855107 247855128 -2832726 + AT_rich Low_complexity Low_complexity 1 21 0 250 167 0 0 chr2 247859503 247859545 -2828309 + MER103 DNA DNA 42 83 -83 296 222 44 59 chr2 247859661 247859796 -2828058 + MER5A DNA MER1_type 14 146 -43 249 145 194 0 chr2 247859840 247859902 -2827952 + MIR SINE MIR 23 96 -166 4183 213 54 117 chr2 247861450 247862425 -2825429 - L1M4 LINE L1 -1983 4399 3364 904 62 78 0 chr2 247862425 247862554 -2825300 + MER85 DNA T2_type 1 139 0 4183 213 54 117 chr2 247862554 247862638 -2825216 - L1M4 LINE L1 -3018 3364 3276 1956 170 17 0 chr2 247862638 247862932 -2824922 - AluSx SINE Alu -11 301 3 4183 213 54 117 chr2 247862932 247863113 -2824741 - L1M4 LINE L1 -3106 3276 3085 1389 31 0 12 chr2 247863113 247863273 -2824581 + SVA Other Other 1229 1386 0 4183 213 54 117 chr2 247863273 247863923 -2823931 - L1M4 LINE L1 -3297 3085 2477 3087 142 89 4 chr2 247863923 247864465 -2823389 + LTR69 LTR ERVL 1 588 0 2288 108 0 7 chr2 247864482 247864787 -2823067 - AluSx SINE Alu -9 303 1 537 302 41 24 chr2 247864792 247865206 -2822648 - L1M4 LINE L1 -3940 2444 2024 2241 130 0 0 chr2 247865227 247865526 -2822328 - AluSx SINE Alu -13 299 1 1804 176 30 0 chr2 247865556 247865898 -2821956 - AluJb SINE Alu 0 351 1 1371 272 19 13 chr2 247866215 247866740 -2821114 - L1M4 LINE L1 -4897 1487 960 553 177 16 73 chr2 247867498 247867622 -2820232 - FRAM SINE Alu -22 154 38 190 288 82 14 chr2 247869678 247869751 -2818103 + L2 LINE L2 3193 3270 -2 3625 217 65 32 chr2 247870354 247870831 -2817023 + L1MDa LINE L1 173 633 -5907 2168 110 10 0 chr2 247870831 247871129 -2816725 + AluSx SINE Alu 1 301 -11 2250 93 0 3 chr2 247871129 247871430 -2816424 + AluSg SINE Alu 1 300 -10 3625 217 65 32 chr2 247871130 247871952 -2815902 + L1MDa LINE L1 633 1427 -5113 2049 90 17 30 chr2 247871952 247872253 -2815601 + AluY SINE Alu 1 297 -14 3625 217 65 32 chr2 247872253 247872943 -2814911 + L1MDa LINE L1 1427 2305 -4235 1819 152 17 10 chr2 247872949 247873251 -2814603 + AluJo SINE Alu 6 309 -3 1956 135 7 10 chr2 247873255 247873552 -2814302 + AluSx SINE Alu 1 296 -16 512 193 0 0 chr2 247873552 247873640 -2814214 + Tigger2 DNA MER2_type 2631 2718 0 356 239 46 55 chr2 247873640 247873704 -2814150 - L1M4 LINE L1 -1817 4329 4266 210 37 0 0 chr2 247873704 247873731 -2814123 + (TTTAG)n Simple_repeat Simple_repeat 3 29 0 2049 102 11 3 chr2 247873731 247874016 -2813838 - AluSq SINE Alu -26 287 1 356 239 46 55 chr2 247874016 247874049 -2813805 - L1M4 LINE L1 -1879 4267 4230 1866 161 7 0 chr2 247874049 247874353 -2813501 + AluJb SINE Alu 1 306 -6 593 121 0 171 chr2 247874383 247874523 -2813331 - FLAM_C SINE Alu -27 116 1 630 105 0 0 chr2 247876270 247876384 -2811470 + (TTCC)n Simple_repeat Simple_repeat 1 114 0 277 249 159 3 chr2 247876403 247876536 -2811318 + MIR SINE MIR 1 149 -62 349 213 20 0 chr2 247877262 247877352 -2810502 - MIR SINE MIR -63 145 87 566 344 75 10 chr2 247878728 247879036 -2808818 + L2 LINE L2 2909 3236 -36 344 368 88 0 chr2 247880175 247880357 -2807497 - MIR SINE MIR -19 243 46 745 271 32 32 chr2 247880510 247880728 -2807126 - MIR SINE MIR -29 233 16 235 118 0 39 chr2 247883265 247883316 -2804538 + (CAGCC)n Simple_repeat Simple_repeat 1 49 0 486 152 0 63 chr2 247883341 247883532 -2804322 + (CAGCC)n Simple_repeat Simple_repeat 2 180 0 1232 111 0 17 chr2 247884191 247884363 -2803491 + AluSx SINE Alu 2 170 -142 348 324 33 29 chr2 247884365 247884575 -2803279 + MLT1F1 LTR MaLR 357 567 0 2023 101 22 7 chr2 247884958 247885264 -2802590 - AluSx SINE Alu 0 310 1 2137 93 14 3 chr2 247885448 247885738 -2802116 - AluSc SINE Alu -16 293 1 277 260 19 67 chr2 247886173 247886277 -2801577 + MER5B DNA MER1_type 17 104 -74 288 213 102 31 chr2 247886451 247886578 -2801276 - MIR3 SINE MIR -72 136 1 978 158 0 13 chr2 247886913 247887071 -2800783 + AluJo SINE Alu 19 174 -138 385 136 12 12 chr2 247887087 247887168 -2800686 + GA-rich Low_complexity Low_complexity 2 82 0 200 319 125 28 chr2 247887265 247887409 -2800445 - MIR SINE MIR -80 182 25 759 275 39 0 chr2 247889990 247890223 -2797631 + AluSp SINE Alu 58 299 -14 1085 199 0 23 chr2 247890227 247890443 -2797411 + AluJb SINE Alu 1 211 -101 4141 238 45 32 chr2 247890444 247890993 -2796861 + L1MC/D LINE L1 3232 3772 -2374 1838 140 13 30 chr2 247890993 247891293 -2796561 + AluJb SINE Alu 2 296 -16 4141 238 45 32 chr2 247891293 247891364 -2796490 + L1MC/D LINE L1 3772 3841 -2305 1899 167 3 0 chr2 247891364 247891669 -2796185 + AluSx SINE Alu 1 306 -6 710 174 15 15 chr2 247891678 247891810 -2796044 + FLAM_C SINE Alu 1 132 -1 4141 238 45 32 chr2 247891810 247892537 -2795317 + L1MC/D LINE L1 3848 4608 -1538 1522 197 42 28 chr2 247892542 247892719 -2795135 + L1MC/D LINE L1 4796 4969 -1292 1478 86 72 32 chr2 247892719 247892940 -2794914 - MER30 DNA MER1_type 0 230 1 1522 197 42 28 chr2 247892940 247893475 -2794379 + L1MC/D LINE L1 4969 5518 -743 1947 113 46 0 chr2 247893553 247893836 -2794018 + AluSg SINE Alu 1 296 -14 198 171 0 0 chr2 247893959 247894000 -2793854 + (CA)n Simple_repeat Simple_repeat 1 41 0 258 335 163 16 chr2 247894917 247895174 -2792680 + L2 LINE L2 2989 3283 -30 2104 112 7 0 chr2 247895281 247895568 -2792286 - AluSx SINE Alu -23 289 1 277 309 115 14 chr2 247895626 247895765 -2792089 + MIR SINE MIR 12 164 -98 247 369 119 4 chr2 247896296 247896540 -2791314 + L2 LINE L2 2382 2653 -661 1853 138 23 20 chr2 247898205 247898510 -2789344 + AluSg SINE Alu 1 306 -4 1817 133 3 51 chr2 247899021 247899193 -2788661 - AluJo SINE Alu -11 301 149 2212 110 0 0 chr2 247899193 247899492 -2788362 - AluSq SINE Alu -14 299 1 1817 133 3 51 chr2 247899492 247899635 -2788219 - AluJo SINE Alu -163 149 1 262 231 65 56 chr2 247900265 247900373 -2787481 - L2 LINE L2 -192 3080 2972 210 136 0 0 chr2 247900432 247900476 -2787378 + (GGGTG)n Simple_repeat Simple_repeat 3 46 0 1869 155 0 20 chr2 247906423 247906727 -2781127 + AluJo SINE Alu 1 298 -14 210 71 0 0 chr2 247906750 247906778 -2781076 + (CA)n Simple_repeat Simple_repeat 1 28 0 1123 88 0 0 chr2 247908669 247908817 -2779037 + AluSg/x SINE Alu 157 304 -8 293 314 41 0 chr2 247908987 247909108 -2778746 - L2 LINE L2 -518 2796 2671 200 311 14 0 chr2 247909183 247909279 -2778575 + L2 LINE L2 2894 2991 -322 235 271 0 0 chr2 247910710 247910758 -2777096 + C-rich Low_complexity Low_complexity 4 51 0 348 241 188 0 chr2 247911280 247911413 -2776441 - MIR SINE MIR -19 243 86 1451 130 0 26 chr2 247912707 247912937 -2774917 - AluJo SINE Alu -88 224 1 826 209 0 0 chr2 247912938 247913101 -2774753 - L1MC3 LINE L1 -94 7691 7529 284 167 0 0 chr2 247913103 247913151 -2774703 - L1MC3 LINE L1 -209 7576 7529 296 146 0 0 chr2 247913153 247913201 -2774653 - L1MC3 LINE L1 -209 7576 7529 290 163 0 0 chr2 247913265 247913314 -2774540 - L1MC3 LINE L1 -209 7576 7528 285 215 31 0 chr2 247913298 247913363 -2774491 - L1MC3 LINE L1 -190 7595 7529 * 258 204 0 0 chr2 247913365 247913414 -2774440 - L1MC3 LINE L1 -209 7576 7528 * 301 250 26 0 chr2 247913398 247913474 -2774380 - L1MC3 LINE L1 -190 7595 7518 270 188 0 0 chr2 247913466 247913514 -2774340 - L1MC3 LINE L1 -210 7575 7528 * 236 289 26 0 chr2 247913498 247913574 -2774280 - L1MC3 LINE L1 -190 7595 7518 * 508 231 17 0 chr2 247913548 247913665 -2774189 - L1MC3 LINE L1 -190 7595 7477 2147 67 92 0 chr2 247913773 247914056 -2773798 - AluSx SINE Alu -3 309 1 2933 185 18 9 chr2 247914101 247914647 -2773207 - L1MB2 LINE L1 -1 6170 5620 1438 89 0 5 chr2 248115535 248115725 -2572129 + AluSg SINE Alu 1 189 -121 7074 71 9 0 chr2 248115839 248116843 -2571011 + L1PA8 LINE L1 5161 6172 0 1939 178 8 17 chr2 248116850 248117204 -2570650 + L1MB5 LINE L1 5812 6162 -12 2102 174 3 0 chr2 248117304 248117689 -2570165 - L1MB3 LINE L1 -166 6017 5632 194 299 0 56 chr2 248119018 248119125 -2568729 - MIR SINE MIR -3 259 159 265 244 44 11 chr2 248119225 248119315 -2568539 - L1 LINE L1 -2597 3549 3457 306 296 36 77 chr2 248119337 248119533 -2568321 - L1ME4a LINE L1 -1 6120 5933 2186 115 0 0 chr2 248119539 248119834 -2568020 + AluSx SINE Alu 1 295 -17 366 323 65 48 chr2 248120229 248120458 -2567396 + MIR SINE MIR 28 260 -2 315 320 131 38 chr2 248120720 248121163 -2566691 + L2 LINE L2 2013 2496 -818 185 91 0 30 chr2 248122770 248122803 -2565051 + (CCCTG)n Simple_repeat Simple_repeat 3 34 0 572 236 137 102 chr2 248123542 248124054 -2563800 + MER74A LTR ERVL 14 543 -15 4371 84 3 3 chr2 248124135 248124716 -2563138 - SVA Other Other 0 1386 806 294 263 66 24 chr2 248125646 248125814 -2562040 - L2 LINE L2 -222 3050 2873 298 288 27 0 chr2 248126371 248126482 -2561372 - LTR16A LTR ERVL -66 384 271 229 364 67 12 chr2 248127546 248127711 -2560143 - L1ME4a LINE L1 -355 5766 5593 1888 139 20 17 chr2 248127862 248128164 -2559690 - AluJb SINE Alu -9 303 1 2407 156 44 10 chr2 248129242 248129653 -2558201 + MSTA LTR MaLR 3 427 -1 487 312 80 0 chr2 248130452 248130651 -2557203 + MLT1J LTR MaLR 1 215 -296 415 277 58 7 chr2 248130792 248130947 -2556907 + MER115 DNA AcHobo 517 679 -14 2126 100 7 0 chr2 248131697 248132000 -2555854 + AluSx SINE Alu 1 305 0 256 102 17 17 chr2 248132427 248132486 -2555368 + (CAAAA)n Simple_repeat Simple_repeat 3 61 0 534 288 63 27 chr2 248132502 248132801 -2555053 + L1MC5 LINE L1 7603 7912 -49 751 265 131 9 chr2 248133220 248133548 -2554306 + MLT1F LTR MaLR 175 542 0 306 0 0 0 chr2 248134786 248134820 -2553034 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 207 0 0 0 chr2 248135234 248135257 -2552597 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 204 143 0 0 chr2 248135682 248135724 -2552130 + (TA)n Simple_repeat Simple_repeat 2 43 0 24 77 0 0 chr2 248138069 248138121 -2549733 + AT_rich Low_complexity Low_complexity 1 52 0 26 30 0 0 chr2 248138169 248138202 -2549652 + AT_rich Low_complexity Low_complexity 1 33 0 193 276 15 112 chr2 248140625 248140759 -2547095 + MIR3 SINE MIR 37 157 -51 2229 110 0 0 chr2 248141660 248141959 -2545895 + AluSx SINE Alu 1 299 -13 1496 252 106 30 chr2 248142508 248143474 -2544380 + L1MD3 LINE L1 6725 7989 -6 547 294 43 43 chr2 248143672 248143954 -2543900 + L1ME LINE L1 1398 1679 -4717 367 351 81 39 chr2 248144402 248144661 -2543193 + L1ME LINE L1 2025 2294 -4102 724 338 89 18 chr2 248144702 248145484 -2542370 + L1ME LINE L1 2293 3130 -3085 345 309 31 19 chr2 248145755 248145917 -2541937 + L1ME LINE L1 3435 3598 -2617 1697 219 119 19 chr2 248146147 248146576 -2541278 + MER70A LTR ERVL 1 472 0 319 369 78 19 chr2 248146630 248146836 -2541018 + L1ME LINE L1 5359 5576 -663 377 305 29 0 chr2 248147361 248147535 -2540319 + (TG)n Simple_repeat Simple_repeat 1 179 0 249 241 35 0 chr2 248147597 248147767 -2540087 + (TG)n Simple_repeat Simple_repeat 1 176 0 2430 46 0 13 chr2 248149424 248149729 -2538125 - AluY SINE Alu -10 301 1 7400 145 43 35 chr2 248156978 248157362 -2530492 - HSMAR2 DNA Mariner -2 1300 921 2089 122 10 0 chr2 248157362 248157657 -2530197 + AluSq SINE Alu 2 299 -14 7400 145 43 35 chr2 248157657 248158559 -2529295 - HSMAR2 DNA Mariner -381 921 3 446 291 64 45 chr2 248159585 248159805 -2528049 - MER58A DNA MER1_type 0 224 1 2540 51 0 3 chr2 248161167 248161478 -2526376 + AluY SINE Alu 1 310 -1 192 246 155 42 chr2 248163494 248163636 -2524218 + L2 LINE L2 2945 3102 -170 367 378 0 0 chr2 248165905 248166077 -2521777 + (CA)n Simple_repeat Simple_repeat 1 172 0 363 307 3 3 chr2 248166116 248166424 -2521430 + (CA)n Simple_repeat Simple_repeat 1 308 0 266 205 13 0 chr2 248170626 248170704 -2517150 + (CA)n Simple_repeat Simple_repeat 2 80 0 399 153 40 0 chr2 248170765 248170915 -2516939 + (CA)n Simple_repeat Simple_repeat 2 157 0 197 171 60 0 chr2 248170930 248171047 -2516807 + (CA)n Simple_repeat Simple_repeat 2 125 0 426 215 11 6 chr2 248171111 248171288 -2516566 + (CA)n Simple_repeat Simple_repeat 2 179 0 270 292 146 0 chr2 248174683 248174813 -2513041 + Charlie1a DNA MER1_type 14 162 -1293 377 269 42 0 chr2 248174856 248174975 -2512879 + Charlie1a DNA MER1_type 260 383 -1072 * 1725 203 192 55 chr2 248174966 248175527 -2512327 + Charlie1a DNA MER1_type 615 1303 -1458 2125 112 6 13 chr2 248175527 248175841 -2512013 - AluSx SINE Alu 0 312 1 1725 203 192 55 chr2 248175841 248176019 -2511835 + Charlie1a DNA MER1_type 1303 1455 0 183 80 0 0 chr2 248176641 248176666 -2511188 + (T)n Simple_repeat Simple_repeat 1 25 0 273 180 0 0 chr2 248176694 248176744 -2511110 + MER46A DNA MER2_type 1 50 -186 265 173 19 0 chr2 248176698 248176750 -2511104 - MER46A DNA MER2_type -96 140 88 * 817 161 0 0 chr2 248176753 248176877 -2510977 + AluJb SINE Alu 179 302 -10 1167 126 0 0 chr2 248176880 248177063 -2510791 + MER46A DNA MER2_type 54 236 0 2355 55 0 35 chr2 248177993 248178304 -2509550 + AluY SINE Alu 1 300 -11 1032 188 0 0 chr2 248178304 248178480 -2509374 + AluJb SINE Alu 134 309 -3 212 253 13 0 chr2 248179060 248179135 -2508719 + CT-rich Low_complexity Low_complexity 1 76 0 252 291 19 19 chr2 248182427 248182530 -2505324 - L2 LINE L2 -335 2978 2876 22 0 0 0 chr2 248182698 248182720 -2505134 + GC_rich Low_complexity Low_complexity 1 22 0 352 373 18 0 chr2 248186084 248186253 -2501601 - HAL1 LINE L1 -781 1726 1555 449 312 160 31 chr2 248186429 248187103 -2500751 - HAL1 LINE L1 -1248 1259 499 201 250 0 0 chr2 248187573 248187617 -2500237 + (TGAG)n Simple_repeat Simple_repeat 4 47 0 22 35 0 0 chr2 248189284 248189313 -2498541 + AT_rich Low_complexity Low_complexity 1 29 0 2123 112 7 3 chr2 248190445 248190749 -2497105 - AluSq SINE Alu -8 305 1 266 343 48 0 chr2 248196107 248196212 -2491642 - MIR SINE MIR -92 170 61 361 331 109 36 chr2 248196258 248196507 -2491347 + HAL1b LINE L1 1178 1346 -2 214 281 75 55 chr2 248198217 248198363 -2489491 - L2 LINE L2 -159 3113 2965 1880 114 40 0 chr2 248199162 248199280 -2488574 + AluSx SINE Alu 1 113 -199 251 27 0 27 chr2 248199280 248199317 -2488537 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1880 114 40 0 chr2 248199317 248199470 -2488384 + AluSx SINE Alu 113 283 -29 181 362 168 13 chr2 248202960 248203258 -2484596 + L2 LINE L2 2854 3197 -75 198 0 0 0 chr2 248203785 248203807 -2484047 + (A)n Simple_repeat Simple_repeat 1 22 0 376 331 45 0 chr2 248204818 248204972 -2482882 + L1MA9 LINE L1 6147 6307 -5 315 270 0 0 chr2 248206559 248206733 -2481121 + (CA)n Simple_repeat Simple_repeat 1 174 0 322 318 0 0 chr2 248206783 248206871 -2480983 + G-rich Low_complexity Low_complexity 5 92 0 1550 131 162 4 chr2 248207215 248207474 -2480380 - AluJb SINE Alu -1 301 2 1199 245 68 8 chr2 248210353 248210720 -2477134 - L1MB7 LINE L1 -9 6175 5787 259 333 29 58 chr2 248211259 248211328 -2476526 - L1MB7 LINE L1 -417 5761 5692 2300 186 36 2 chr2 248211328 248211742 -2476112 + MSTA LTR MaLR 1 428 0 259 333 29 58 chr2 248211742 248211879 -2475975 - L1MB7 LINE L1 -486 5692 5561 236 238 0 0 chr2 248212683 248212746 -2475108 + (CTG)n Simple_repeat Simple_repeat 1 63 0 312 295 171 43 chr2 248213439 248213649 -2474205 - L1ME LINE L1 -501 5620 5384 1839 116 70 0 chr2 248214482 248214766 -2473088 + AluSx SINE Alu 1 304 -8 231 264 0 0 chr2 248215523 248215576 -2472278 + Charlie2 DNA MER1_type 1972 2024 -838 207 216 175 0 chr2 248216837 248216934 -2470920 + L2 LINE L2 2938 3051 -221 250 297 139 0 chr2 248218002 248218103 -2469751 + MER3 DNA MER1_type 93 207 -2 295 281 30 37 chr2 248218397 248218532 -2469322 - MIR SINE MIR -68 194 61 2183 102 0 0 chr2 248219689 248219984 -2467870 - AluSx SINE Alu -17 295 1 1225 115 26 10 chr2 248221284 248221476 -2466378 + L1MA2 LINE L1 6110 6304 0 418 270 80 45 chr2 248221694 248221894 -2465960 + L1ME LINE L1 5456 5662 -459 192 237 0 0 chr2 248222291 248222329 -2465525 + L2 LINE L2 3273 3310 -3 1530 155 4 0 chr2 248222443 248222701 -2465153 - L1MA4 LINE L1 -329 5971 5713 1069 239 27 7 chr2 248222712 248223005 -2464849 + L1 LINE L1 5097 5395 -751 399 338 35 0 chr2 248227207 248227352 -2460502 - MIR SINE MIR -34 228 79 282 125 0 0 chr2 248232904 248232952 -2454902 + (TCCCC)n Simple_repeat Simple_repeat 2 49 0 418 287 30 42 chr2 248234427 248234594 -2453260 + HAL1 LINE L1 1051 1215 -1292 314 323 143 21 chr2 248234726 248235005 -2452849 + HAL1 LINE L1 1473 1785 -722 300 317 145 7 chr2 248235088 248235233 -2452621 + HAL1 LINE L1 1982 2146 -361 1623 114 114 0 chr2 248235337 248235625 -2452229 + AluSx SINE Alu 1 317 0 23 0 0 0 chr2 248236329 248236352 -2451502 + AT_rich Low_complexity Low_complexity 1 23 0 471 221 3 0 chr2 248236422 248236726 -2451128 + (CA)n Simple_repeat Simple_repeat 1 305 0 507 319 33 0 chr2 248239099 248239281 -2448573 - MIR SINE MIR -39 223 36 194 332 4 7 chr2 248240594 248240691 -2447163 - MIR SINE MIR -63 145 49 29 47 0 0 chr2 248244593 248244636 -2443218 + AT_rich Low_complexity Low_complexity 1 43 0 239 256 28 33 chr2 248245167 248245347 -2442507 + (CA)n Simple_repeat Simple_repeat 1 179 0 275 256 19 38 chr2 248245467 248245627 -2442227 + C-rich Low_complexity Low_complexity 2 158 0 * 313 217 43 37 chr2 248245611 248245772 -2442082 + (CCCA)n Simple_repeat Simple_repeat 4 165 0 * 367 273 6 33 chr2 248245674 248245857 -2441997 + C-rich Low_complexity Low_complexity 2 179 0 997 255 60 20 chr2 248246316 248246618 -2441236 - MER33 DNA MER1_type -8 316 3 1436 285 68 31 chr2 248246727 248247742 -2440112 - L1ME2 LINE L1 -188 5976 4915 1731 179 0 7 chr2 248251158 248251465 -2436389 + AluJb SINE Alu 1 305 -7 217 243 14 29 chr2 248254133 248254203 -2433651 + (CGGGG)n Simple_repeat Simple_repeat 3 71 0 311 321 49 111 chr2 248256273 248256678 -2431176 + L1MEc LINE L1 2010 2389 -4007 701 296 153 21 chr2 248257489 248258511 -2429343 + L1MEc LINE L1 971 2174 -4222 234 0 0 0 chr2 248258511 248258537 -2429317 + (TA)n Simple_repeat Simple_repeat 2 27 0 701 296 153 21 chr2 248258537 248258705 -2429149 + L1MEc LINE L1 2174 2318 -4078 * 2067 308 58 37 chr2 248258690 248260282 -2427572 + L1MEc LINE L1 3022 4682 -1533 1811 280 74 20 chr2 248260301 248261202 -2426652 + L1MEc LINE L1 5102 6065 -174 380 267 17 12 chr2 248262380 248262601 -2425253 + CT-rich Low_complexity Low_complexity 1 222 0 289 258 0 23 chr2 248262657 248262785 -2425069 + (CTG)n Simple_repeat Simple_repeat 3 127 0 935 264 49 16 chr2 248263097 248263404 -2424450 + L1ME2 LINE L1 5539 5855 -309 233 286 0 0 chr2 248263566 248263622 -2424232 + MER2 DNA MER2_type 289 344 -1 374 296 100 35 chr2 248263624 248263854 -2424000 + L1ME2 LINE L1 5919 6163 -1 1327 184 92 7 chr2 248264492 248264763 -2423091 - AluJo SINE Alu -16 296 3 725 211 0 8 chr2 248264768 248264901 -2422953 - FLAM_C SINE Alu -1 132 1 1817 172 9 40 chr2 248265493 248265841 -2422013 + MER1B DNA MER1_type 1 337 0 253 312 129 35 chr2 248267861 248268063 -2419791 + MIR SINE MIR 6 226 -36 243 0 0 0 chr2 248270287 248270314 -2417540 + (A)n Simple_repeat Simple_repeat 1 27 0 1726 154 7 20 chr2 248271966 248272272 -2415582 + AluSx SINE Alu 1 302 -10 22 35 0 0 chr2 248272449 248272478 -2415376 + AT_rich Low_complexity Low_complexity 1 29 0 378 240 153 0 chr2 248274789 248274912 -2412942 + MER33 DNA MER1_type 1 128 -86 * 1146 207 196 46 chr2 248274904 248275296 -2412558 + MLT1F1 LTR MaLR 111 561 -6 248 200 0 100 chr2 248275315 248275405 -2412449 + MER33 DNA MER1_type 283 363 0 305 229 152 19 chr2 248275614 248275719 -2412135 - L1ME4a LINE L1 -1 6120 6002 204 151 38 57 chr2 248279609 248279662 -2408192 - L2 LINE L2 -2 3270 3219 1540 323 58 32 chr2 248283229 248284050 -2403804 - HAL1 LINE L1 -698 1809 967 324 0 0 0 chr2 248284065 248284101 -2403753 + (TG)n Simple_repeat Simple_repeat 1 36 0 1431 149 39 8 chr2 248284106 248284361 -2403493 - AluSx SINE Alu -47 265 3 273 362 53 30 chr2 248284364 248284668 -2403186 - HAL1 LINE L1 -1586 921 611 278 303 46 13 chr2 248284832 248284984 -2402870 - HAL1 LINE L1 -2259 248 92 462 291 156 21 chr2 248285150 248285483 -2402371 - L1MC5 LINE L1 -279 7682 7305 469 285 150 57 chr2 248285547 248285950 -2401904 - L1MC5 LINE L1 -746 7215 6754 2342 62 0 16 chr2 248285950 248286255 -2401599 - AluY SINE Alu -11 300 1 469 285 150 57 chr2 248286255 248286357 -2401497 - L1MC5 LINE L1 -1207 6754 6663 321 235 78 20 chr2 248287307 248287409 -2400445 - MIR SINE MIR -117 145 38 223 311 11 44 chr2 248291307 248291397 -2396457 - MIR SINE MIR -175 87 1 395 223 16 26 chr2 248291406 248291538 -2396316 + L1ME3A LINE L1 1300 1495 -4877 262 138 35 0 chr2 248291879 248291937 -2395917 + GA-rich Low_complexity Low_complexity 3 62 0 1738 161 3 0 chr2 248292273 248292558 -2395296 + AluJb SINE Alu 10 295 -17 243 146 0 0 chr2 248292595 248292636 -2395218 + (CA)n Simple_repeat Simple_repeat 2 42 0 1140 244 33 72 chr2 248292649 248293194 -2394660 + L1MC5 LINE L1 7248 7771 -190 425 319 142 29 chr2 248293356 248294258 -2393596 + L1ME3A LINE L1 3101 3900 -2482 2428 54 0 16 chr2 248294258 248294574 -2393280 + AluY SINE Alu 1 311 0 425 319 142 29 chr2 248294574 248295103 -2392751 + L1ME3A LINE L1 3900 4723 -1659 1682 161 20 27 chr2 248295103 248295402 -2392452 - AluJb SINE Alu -15 297 1 425 319 142 29 chr2 248295402 248295521 -2392333 + L1ME3A LINE L1 4723 4827 -1555 566 288 87 41 chr2 248295618 248296011 -2391843 + L1ME3A LINE L1 5112 5522 -860 430 288 124 31 chr2 248296287 248296544 -2391310 + L1ME3A LINE L1 5855 6135 -271 369 170 50 60 chr2 248299085 248299185 -2388669 + HAL1 LINE L1 803 901 -1606 294 217 60 12 chr2 248300128 248300211 -2387643 - MIR SINE MIR -116 146 60 1891 247 36 16 chr2 248300245 248300739 -2387115 - MLT1D LTR MaLR -1 504 1 236 344 57 13 chr2 248300739 248300896 -2386958 - L2 LINE L2 -623 2691 2528 796 289 165 23 chr2 248301011 248301581 -2386273 - L2 LINE L2 -771 2543 1893 304 235 0 29 chr2 248302088 248302156 -2385698 + L1ME LINE L1 5553 5618 -503 261 333 0 0 chr2 248302390 248302471 -2385383 + (CATA)n Simple_repeat Simple_repeat 4 84 0 1687 190 0 10 chr2 248304025 248304335 -2383519 + AluJb SINE Alu 1 307 -5 7194 22 1 0 chr2 248304469 248305876 -2381978 + L1PA3 LINE L1 4774 6181 0 522 278 96 54 chr2 248306357 248306686 -2381168 + L1M4 LINE L1 2794 3150 -2996 371 240 78 26 chr2 248307022 248307176 -2380678 - L1MD2 LINE L1 -1 6358 6197 349 325 154 0 chr2 248307244 248307432 -2380422 - L1MDa LINE L1 -4219 2321 2105 387 0 0 0 chr2 248307828 248307871 -2379983 + (CA)n Simple_repeat Simple_repeat 2 44 0 180 0 0 0 chr2 248308753 248308773 -2379081 + (A)n Simple_repeat Simple_repeat 1 20 0 206 302 81 0 chr2 248309689 248309775 -2378079 - MER5A DNA MER1_type -3 186 94 693 281 139 17 chr2 248310178 248310647 -2377207 + L2 LINE L2 2244 2769 -545 223 259 19 76 chr2 248310690 248310848 -2377006 + L2 LINE L2 2990 3138 -175 195 42 0 0 chr2 248310968 248310992 -2376862 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 275 289 89 87 chr2 248311095 248311680 -2376174 + L1M4 LINE L1 2620 3205 -2941 408 338 81 3 chr2 248313107 248313403 -2374451 + HAL1 LINE L1 2 320 -2187 247 295 83 92 chr2 248314924 248315078 -2372776 - MARNA DNA Mariner -202 384 231 2130 100 0 31 chr2 248315078 248315397 -2372457 + AluSx SINE Alu 1 309 -3 247 295 83 92 chr2 248315397 248315459 -2372395 - MARNA DNA Mariner -355 231 170 4762 137 105 17 chr2 248315682 248316512 -2371342 - MER4D LTR ERV1 0 903 1 198 0 0 0 chr2 248316587 248316609 -2371245 + (A)n Simple_repeat Simple_repeat 1 22 0 227 128 0 0 chr2 248318386 248318425 -2369429 + L1ME4a LINE L1 6078 6116 -5 344 273 55 36 chr2 248318548 248318713 -2369141 + L2 LINE L2 1301 1468 -1846 22 35 0 0 chr2 248319381 248319410 -2368444 + AT_rich Low_complexity Low_complexity 1 29 0 1107 151 30 43 chr2 248319518 248319750 -2368104 + MER46A DNA MER2_type 8 236 0 311 314 66 0 chr2 248320803 248320924 -2366930 - MIR SINE MIR -74 188 60 2174 95 3 3 chr2 248321975 248322269 -2365585 + AluSx SINE Alu 1 294 -18 38 39 0 0 chr2 248324422 248324474 -2363380 + AT_rich Low_complexity Low_complexity 1 52 0 201 121 0 0 chr2 248324514 248324547 -2363307 + (TATG)n Simple_repeat Simple_repeat 2 34 0 990 234 111 14 chr2 248325268 248325625 -2362229 - MER21B LTR ERV1 -90 841 433 313 274 88 0 chr2 248325619 248325732 -2362122 - MER21B LTR ERV1 -643 220 98 * 264 274 16 0 chr2 248325786 248325848 -2362006 - MER21B LTR ERV1 -781 82 20 468 318 145 13 chr2 248327546 248328039 -2359815 - L1M4 LINE L1 -719 5459 4881 304 347 61 5 chr2 248328069 248328265 -2359589 - L1M4 LINE L1 -1327 4819 4613 709 132 40 7 chr2 248328269 248328421 -2359433 + GA-rich Low_complexity Low_complexity 2 158 0 185 258 15 0 chr2 248328405 248328471 -2359383 + G-rich Low_complexity Low_complexity 2 68 0 * 968 310 107 14 chr2 248328486 248329191 -2358663 - L1M4 LINE L1 -1551 4595 3792 2266 76 0 3 chr2 248329364 248329665 -2358189 - AluY SINE Alu -11 300 1 950 237 95 55 chr2 248329885 248330265 -2357589 - L1MC3 LINE L1 -1 7784 7390 235 318 148 50 chr2 248331580 248331938 -2355916 + L1MC5 LINE L1 7521 7913 -48 2222 78 3 3 chr2 248334397 248334692 -2353162 - AluY SINE Alu -16 295 1 211 271 56 97 chr2 248334828 248334972 -2352882 - MIR SINE MIR -5 257 120 408 293 79 0 chr2 248335265 248335429 -2352425 - L2 LINE L2 -233 3080 2904 1474 161 94 7 chr2 248337522 248337808 -2350046 + AluJo SINE Alu 1 311 -1 575 316 105 49 chr2 248340079 248341287 -2346567 + L1MEd LINE L1 270 1634 -856 279 0 0 0 chr2 248341506 248341537 -2346317 + (TG)n Simple_repeat Simple_repeat 2 32 0 448 369 38 51 chr2 248343868 248344339 -2343515 + L1MEd LINE L1 962 1426 -5104 356 311 68 47 chr2 248344314 248344549 -2343305 + L1MEd LINE L1 1315 1554 -4976 * 259 290 12 93 chr2 248344634 248344796 -2343058 + L1MEd LINE L1 1763 1911 -4629 549 282 8 54 chr2 248345028 248345269 -2342585 + L1MEd LINE L1 2534 2763 -3777 1773 149 19 7 chr2 248345376 248345684 -2342170 + AluJb SINE Alu 1 312 0 247 250 48 12 chr2 248345728 248345812 -2342042 + L1MEd LINE L1 3335 3421 -3119 445 333 36 6 chr2 248345835 248346000 -2341854 + L1MEd LINE L1 3490 3659 -2881 614 274 87 14 chr2 248346457 248346665 -2341189 + MIR SINE MIR 3 225 -37 291 193 0 18 chr2 248347283 248347340 -2340514 - FLAM SINE Alu -1 132 77 205 196 0 20 chr2 248355324 248355375 -2332479 + (CATA)n Simple_repeat Simple_repeat 1 50 0 666 189 0 0 chr2 248355378 248355558 -2332296 + (CA)n Simple_repeat Simple_repeat 1 180 0 231 256 108 23 chr2 248356496 248356625 -2331229 + Tigger8 DNA MER2_type 350 489 -177 1727 167 0 42 chr2 248357322 248357633 -2330221 - AluJb SINE Alu -14 298 1 186 243 0 0 chr2 248357816 248357853 -2330001 - MIR SINE MIR -94 168 132 1163 196 45 12 chr2 248358472 248358863 -2328991 + L1M4 LINE L1 5087 5484 -690 449 232 72 14 chr2 248359204 248359342 -2328512 + MLT1D LTR MaLR 4 149 -356 639 257 120 95 chr2 248359342 248359793 -2328061 + L1MC5 LINE L1 6773 7234 -727 423 332 104 45 chr2 248359822 248360198 -2327656 + L1MC5 LINE L1 7290 7687 -274 194 289 56 56 chr2 248363305 248363395 -2324459 + L2 LINE L2 3163 3252 -20 228 233 6 72 chr2 248364092 248364272 -2323582 + (CCCCAG)n Simple_repeat Simple_repeat 6 173 0 1635 162 22 0 chr2 248364614 248364892 -2322962 + AluSx SINE Alu 14 297 -15 508 203 106 24 chr2 248365075 248365198 -2322656 + FLAM_A SINE Alu 1 133 0 391 320 102 0 chr2 248365576 248365723 -2322131 - MIR SINE MIR -80 182 21 247 244 64 18 chr2 248366960 248367198 -2320656 + (CACTA)n Simple_repeat Simple_repeat 1 248 0 262 241 72 0 chr2 248367419 248367585 -2320269 + (CACTA)n Simple_repeat Simple_repeat 1 178 0 349 252 67 0 chr2 248367635 248367970 -2319884 + (CACTA)n Simple_repeat Simple_repeat 1 357 0 366 236 62 0 chr2 248367998 248368283 -2319571 + (CACTA)n Simple_repeat Simple_repeat 1 302 0 216 272 63 0 chr2 248368403 248368561 -2319293 + (CACTA)n Simple_repeat Simple_repeat 5 172 0 262 243 59 18 chr2 248368598 248368767 -2319087 + (CACTA)n Simple_repeat Simple_repeat 3 178 0 202 308 95 53 chr2 248369097 248369266 -2318588 - L2 LINE L2 -262 3051 2876 503 262 89 0 chr2 248369388 248369556 -2318298 + MER63 DNA MER1_type 809 991 -69 361 272 68 43 chr2 248370846 248371008 -2316846 - MER115 DNA AcHobo -29 664 499 393 338 126 52 chr2 248371996 248372742 -2315112 + L1M4c LINE L1 907 1638 -4744 1302 243 69 8 chr2 248372955 248373330 -2314524 - L1MC3 LINE L1 -115 7670 7273 535 343 102 20 chr2 248373338 248373911 -2313943 + L1M4c LINE L1 3173 3834 -2548 714 287 159 35 chr2 248373920 248374755 -2313099 + L1M4c LINE L1 3899 4837 -1545 458 250 0 17 chr2 248376434 248376614 -2311240 + (CA)n Simple_repeat Simple_repeat 1 177 0 195 129 0 0 chr2 248377876 248377907 -2309947 + (CAGCC)n Simple_repeat Simple_repeat 3 33 0 180 322 111 0 chr2 248380165 248380255 -2307599 - L2 LINE L2 -559 2755 2656 242 284 69 0 chr2 248380609 248380711 -2307143 + MIR SINE MIR 111 219 -43 2679 26 0 0 chr2 248380878 248381188 -2306666 + AluYa5 SINE Alu 1 310 -1 390 303 77 14 chr2 248381822 248382030 -2305824 - MIR SINE MIR -34 228 8 253 250 0 0 chr2 248382060 248382108 -2305746 + (CACG)n Simple_repeat Simple_repeat 3 50 0 236 211 53 13 chr2 248382821 248382897 -2304957 + Charlie7 DNA MER1_type 44 122 -2490 2412 53 17 0 chr2 248384716 248385017 -2302837 - AluY SINE Alu -5 306 1 439 232 169 73 chr2 248386157 248386201 -2301653 - MER3 DNA MER1_type -1 208 170 180 0 0 0 chr2 248386201 248386221 -2301633 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 439 232 169 73 chr2 248386221 248386353 -2301501 - MER3 DNA MER1_type -39 170 15 1723 167 7 13 chr2 248387322 248387627 -2300227 - AluJo SINE Alu 0 312 10 334 294 56 0 chr2 248389886 248390012 -2297842 + MIR SINE MIR 23 155 -107 23 33 0 0 chr2 248391427 248391457 -2296397 + AT_rich Low_complexity Low_complexity 1 30 0 239 191 0 0 chr2 248393978 248394025 -2293829 + MIR SINE MIR 101 147 -61 182 339 83 9 chr2 248397713 248397822 -2290032 + MIR3 SINE MIR 88 204 -4 226 326 131 17 chr2 248399875 248400050 -2287804 + L1ME3A LINE L1 450 644 -5475 319 298 40 40 chr2 248400199 248400323 -2287531 + MIR SINE MIR 32 155 -107 508 252 36 69 chr2 248400422 248400644 -2287210 + L1ME3A LINE L1 902 1115 -5004 3964 115 37 5 chr2 248400644 248401235 -2286619 + MER4B LTR ERV1 1 610 0 508 252 36 69 chr2 248401235 248401286 -2286568 + L1ME3A LINE L1 1115 1166 -4953 360 322 70 37 chr2 248401471 248401927 -2285927 + L1ME3A LINE L1 4844 5314 -815 357 335 97 10 chr2 248401948 248402154 -2285700 + L1ME3A LINE L1 5416 5639 -2152 1470 152 0 35 chr2 248402166 248402422 -2285432 + AluJo SINE Alu 4 250 -62 1386 263 205 35 chr2 248402620 248403566 -2284288 + L1MC4 LINE L1 6043 7132 -910 618 178 115 63 chr2 248403570 248403761 -2284093 + MER6B DNA MER2_type 6 206 -4 232 111 111 19 chr2 248403798 248403852 -2284002 + MER6B DNA MER2_type 148 206 -4 1281 272 203 19 chr2 248403859 248404627 -2283227 + L1MC4 LINE L1 7134 8042 0 282 270 73 11 chr2 248405524 248405702 -2282152 + L1ME3A LINE L1 5746 5934 -219 26 0 0 0 chr2 248405886 248405912 -2281942 + AT_rich Low_complexity Low_complexity 1 26 0 2201 78 3 0 chr2 248405966 248406250 -2281604 + AluSq SINE Alu 20 304 -9 356 370 59 40 chr2 248406754 248407027 -2280827 - L1M4 LINE L1 -2241 3905 3628 2480 58 0 0 chr2 248407030 248407338 -2280516 + AluY SINE Alu 1 308 -3 1443 164 164 10 chr2 248407737 248408049 -2279805 - MER51A LTR ERV1 -17 617 258 481 245 14 56 chr2 248408199 248408342 -2279512 + MIR SINE MIR 89 225 -37 332 291 37 15 chr2 248408409 248408543 -2279311 + L2 LINE L2 3136 3272 0 248 259 80 93 chr2 248408862 248409024 -2278830 + L1ME LINE L1 5614 5773 -348 220 189 0 0 chr2 248409099 248409136 -2278718 + GA-rich Low_complexity Low_complexity 1 37 0 4144 194 35 16 chr2 248410834 248411529 -2276325 + L1MB4 LINE L1 4887 5625 -555 2066 122 24 3 chr2 248411529 248411824 -2276030 + AluSx SINE Alu 1 301 -11 4144 194 35 16 chr2 248411824 248412391 -2275463 + L1MB4 LINE L1 5625 6180 0 191 231 0 0 chr2 248413951 248413990 -2273864 + L2 LINE L2 3275 3313 0 280 275 12 12 chr2 248415655 248415735 -2272119 - MIR SINE MIR -70 192 113 1348 282 81 42 chr2 248417814 248419006 -2268848 + L1ME3A LINE L1 2367 3605 -2541 712 259 33 33 chr2 248419010 248419222 -2268632 + MER58C DNA MER1_type 1 212 -3 1828 270 125 40 chr2 248419226 248419520 -2268334 + L1ME3A LINE L1 3603 3871 -2299 343 210 0 12 chr2 248419520 248419601 -2268253 - MER116 DNA Mariner 0 80 1 1828 270 125 40 chr2 248419601 248420080 -2267774 + L1ME3A LINE L1 3871 4308 -1862 2180 131 0 3 chr2 248420080 248420385 -2267469 + AluSx SINE Alu 1 304 -8 1828 270 125 40 chr2 248420385 248420583 -2267271 + L1ME3A LINE L1 4308 4488 -1682 2414 72 0 10 chr2 248420583 248420887 -2266967 + AluY SINE Alu 1 301 -10 1828 270 125 40 chr2 248420887 248422230 -2265624 + L1ME3A LINE L1 4488 6165 -5 328 271 83 87 chr2 248422249 248422478 -2265376 + L1MC4a LINE L1 5696 5923 -1885 1532 203 16 64 chr2 248422505 248422958 -2264896 - L1MC3 LINE L1 -46 7739 7309 1879 212 22 3 chr2 248427638 248427996 -2259858 + MLT1A1 LTR MaLR 1 365 0 30 0 0 0 chr2 248428048 248428078 -2259776 + AT_rich Low_complexity Low_complexity 1 30 0 1408 152 46 53 chr2 248431106 248431389 -2256465 + AluJb SINE Alu 1 281 -31 293 141 14 0 chr2 248431390 248431461 -2256393 + (CA)n Simple_repeat Simple_repeat 2 73 0 229 216 7 22 chr2 248431513 248431652 -2256202 + (CA)n Simple_repeat Simple_repeat 2 138 0 189 178 0 0 chr2 248431677 248431722 -2256132 + (CA)n Simple_repeat Simple_repeat 1 45 0 339 218 23 15 chr2 248431861 248431994 -2255860 + (CA)n Simple_repeat Simple_repeat 2 135 0 426 278 12 0 chr2 248432005 248432174 -2255680 + (CA)n Simple_repeat Simple_repeat 2 172 0 287 188 23 8 chr2 248432318 248432446 -2255408 + (CA)n Simple_repeat Simple_repeat 2 131 0 368 174 5 114 chr2 248432504 248432705 -2255149 + (CA)n Simple_repeat Simple_repeat 2 180 0 430 223 0 72 chr2 248432736 248432929 -2254925 + (CA)n Simple_repeat Simple_repeat 2 180 0 2205 108 3 3 chr2 248433332 248433628 -2254226 - AluSx SINE Alu -16 296 1 381 303 118 53 chr2 248435849 248436173 -2251681 + L1M4 LINE L1 2202 2543 -3603 26 0 0 0 chr2 248436294 248436320 -2251534 + AT_rich Low_complexity Low_complexity 1 26 0 2219 111 3 0 chr2 248436328 248436616 -2251238 - AluSc SINE Alu -20 289 1 335 311 98 34 chr2 248436749 248437098 -2250756 + L1MC/D LINE L1 5384 5750 -429 248 277 148 20 chr2 248437917 248438018 -2249836 + MIR3 SINE MIR 71 184 -24 2120 104 0 37 chr2 248438825 248439124 -2248730 - AluSx SINE Alu -20 292 5 835 245 24 19 chr2 248439254 248439466 -2248388 - MER20 DNA MER1_type 0 219 7 305 333 25 0 chr2 248439971 248440091 -2247763 - L1ME4a LINE L1 -218 5903 5781 252 0 0 0 chr2 248440376 248440404 -2247450 + (T)n Simple_repeat Simple_repeat 1 28 0 410 328 81 79 chr2 248440636 248441103 -2246751 - HAL1 LINE L1 -815 1692 1225 22 0 0 0 chr2 248441968 248441990 -2245864 + AT_rich Low_complexity Low_complexity 1 22 0 387 222 67 0 chr2 248442110 248442200 -2245654 + L1ME3A LINE L1 2230 2325 -4071 2214 209 103 120 chr2 248442308 248443415 -2244439 + L1ME3A LINE L1 2280 3364 -2851 2225 127 0 16 chr2 248443415 248443731 -2244123 + AluJb SINE Alu 1 311 -1 2214 209 103 120 chr2 248443731 248443870 -2243984 + L1ME3A LINE L1 3364 3504 -2711 1772 271 103 58 chr2 248443929 248444862 -2242992 - L1MC4a LINE L1 -685 7123 6149 183 271 21 0 chr2 248445265 248445313 -2242541 - L2 LINE L2 -536 2778 2730 239 329 21 57 chr2 248446528 248446668 -2241186 + MIR3 SINE MIR 20 154 -54 2180 305 93 19 chr2 248448535 248450468 -2237386 + L1ME3A LINE L1 4118 6231 -8 21 79 0 34 chr2 248450787 248450876 -2236978 + AT_rich Low_complexity Low_complexity 1 86 0 1060 248 153 13 chr2 248452893 248453265 -2234589 + Charlie1b DNA MER1_type 1 450 -2311 1817 159 48 23 chr2 248453265 248453488 -2234366 + MER46B DNA MER2_type 1 114 -2617 1881 111 63 15 chr2 248453488 248453786 -2234068 + AluSx SINE Alu 1 311 0 1817 159 48 23 chr2 248453786 248453913 -2233941 + MER46B DNA MER2_type 114 236 0 1060 248 153 13 chr2 248453913 248453996 -2233858 + Charlie1b DNA MER1_type 450 520 -3 499 290 0 0 chr2 248457019 248457295 -2230559 + (CA)n Simple_repeat Simple_repeat 1 276 0 183 255 0 0 chr2 248457352 248457458 -2230396 + (CA)n Simple_repeat Simple_repeat 2 107 0 218 250 14 0 chr2 248458570 248458642 -2229212 + (CA)n Simple_repeat Simple_repeat 1 73 0 307 409 78 14 chr2 248458731 248459232 -2228622 - L1MC4a LINE L1 -2012 5796 5264 1903 121 19 0 chr2 248459235 248459499 -2228355 - AluSx SINE Alu 0 312 44 902 150 12 36 chr2 248465608 248465775 -2222079 + L1MB2 LINE L1 6007 6169 -2 750 194 112 0 chr2 248466734 248466904 -2220950 - MER20 DNA MER1_type -1 218 30 2003 116 0 17 chr2 248467781 248468083 -2219771 - AluSq SINE Alu -8 305 9 1592 183 0 19 chr2 248469393 248469710 -2218144 + AluJo SINE Alu 1 311 -1 234 238 32 0 chr2 248470095 248470158 -2217696 - HAL1 LINE L1 -54 2453 2389 232 321 8 30 chr2 248472065 248472199 -2215655 + (CGTG)n Simple_repeat Simple_repeat 1 131 0 197 388 49 27 chr2 248472674 248472857 -2214997 - MIR SINE MIR -68 194 8 1424 73 227 0 chr2 248474074 248474294 -2213560 + LTR12 LTR ERV1 1 270 -444 374 234 42 0 chr2 248474294 248474400 -2213454 + LTR30 LTR ERV1 544 643 -79 1493 133 36 0 chr2 248474400 248474625 -2213229 + LTR12 LTR ERV1 480 712 -2 315 317 74 40 chr2 248474883 248475085 -2212769 + MLT1K LTR MaLR 137 345 -243 1416 184 3 74 chr2 248475309 248475619 -2212235 + AluJb SINE Alu 1 288 -24 219 69 0 0 chr2 248479848 248479877 -2207977 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 282 386 70 8 chr2 248480113 248480436 -2207418 - L2 LINE L2 -274 2998 2655 251 308 60 15 chr2 248480840 248480973 -2206881 - L1ME LINE L1 -399 5722 5584 1640 170 7 4 chr2 248481054 248481331 -2206523 - AluJb SINE Alu -34 278 1 22 0 0 0 chr2 248481332 248481354 -2206500 + AT_rich Low_complexity Low_complexity 1 22 0 351 288 34 0 chr2 248481387 248481505 -2206349 - MIR SINE MIR 0 262 141 338 316 87 52 chr2 248481588 248481819 -2206035 - L1ME LINE L1 -786 5360 5122 37 81 0 0 chr2 248485356 248485442 -2202412 + GC_rich Low_complexity Low_complexity 1 86 0 270 256 0 41 chr2 248485530 248485702 -2202152 + CT-rich Low_complexity Low_complexity 2 166 0 22 35 0 0 chr2 248486163 248486192 -2201662 + GC_rich Low_complexity Low_complexity 1 29 0 814 238 156 35 chr2 248489026 248489366 -2198488 + L1ME2 LINE L1 5751 6131 -33 26 0 0 0 chr2 248490134 248490160 -2197694 + AT_rich Low_complexity Low_complexity 1 26 0 1743 86 22 0 chr2 248490327 248490559 -2197295 - L1PA5 LINE L1 0 6154 5918 1469 56 5 0 chr2 248490563 248490758 -2197096 + L1PA5 LINE L1 5707 5902 -252 250 252 61 61 chr2 248491280 248491411 -2196443 - LTR16C LTR ERVL -3 488 358 913 203 6 0 chr2 248491946 248492123 -2195731 - Tigger5 DNA MER2_type -60 2263 2086 611 313 92 14 chr2 248492292 248492769 -2195085 - MER115 DNA AcHobo 0 693 164 190 244 44 0 chr2 248493099 248493144 -2194710 - MIR SINE MIR 0 262 216 2331 69 0 0 chr2 248493204 248493493 -2194361 + AluY SINE Alu 1 289 -22 323 305 50 35 chr2 248493889 248494030 -2193824 + L1ME1 LINE L1 423 565 -5965 1134 235 84 118 chr2 248494084 248494841 -2193013 + L1ME1 LINE L1 745 1476 -5054 570 234 85 139 chr2 248494902 248495313 -2192541 + LTR16A1 LTR ERVL 69 457 0 340 388 69 4 chr2 248495322 248495567 -2192287 + L1ME1 LINE L1 1588 1848 -4873 986 204 0 15 chr2 248495582 248495778 -2192076 - AluJo SINE Alu -2 310 118 384 370 35 0 chr2 248496320 248496520 -2191334 + HERV16 LTR ERVL 990 1196 -3800 316 336 61 32 chr2 248496678 248496990 -2190864 + HERV16 LTR ERVL 1456 1776 -3878 306 302 43 0 chr2 248497037 248497153 -2190701 + HERV16 LTR ERVL 1892 2012 -3752 1781 191 121 79 chr2 248497223 248497718 -2190136 - MLT1E1 LTR MaLR 0 654 132 1772 249 99 4 chr2 248497718 248498211 -2189643 + MER34 LTR ERV1 1 540 -2 1781 191 121 79 chr2 248498211 248498261 -2189593 - MLT1E1 LTR MaLR -522 132 86 1995 122 0 3 chr2 248498511 248498819 -2189035 - AluSx SINE Alu 0 307 1 276 279 86 93 chr2 248498853 248498993 -2188861 + HERV16 LTR ERVL 2125 2263 -2733 570 313 68 40 chr2 248499328 248500107 -2187747 + L1ME1 LINE L1 2457 3254 -3286 * 778 332 98 26 chr2 248500080 248500338 -2187516 + L1ME1 LINE L1 4637 4875 -1665 725 186 16 77 chr2 248500338 248500521 -2187333 + MER104 DNA MER2_type 5 176 -4 778 332 98 26 chr2 248500521 248501108 -2186746 + L1ME1 LINE L1 4875 5543 -997 760 240 12 72 chr2 248501109 248501359 -2186495 + L1ME1 LINE L1 5783 6017 -543 2049 102 33 51 chr2 248501359 248501522 -2186332 + THE1B LTR MaLR 1 156 -208 2075 93 19 47 chr2 248501522 248501843 -2186011 - AluSp SINE Alu -1 312 1 2049 102 33 51 chr2 248501843 248502014 -2185840 + THE1B LTR MaLR 156 329 -35 980 223 27 13 chr2 248502024 248502248 -2185606 + L1ME1 LINE L1 6012 6238 -322 1950 98 91 0 chr2 248502588 248502874 -2184980 - AluSx SINE Alu 0 312 1 297 337 0 31 chr2 248503417 248503515 -2184339 + L2 LINE L2 3215 3309 -4 25 0 0 0 chr2 248503994 248504019 -2183835 + AT_rich Low_complexity Low_complexity 1 25 0 246 62 0 0 chr2 248504529 248504561 -2183293 + (CA)n Simple_repeat Simple_repeat 2 33 0 813 286 65 31 chr2 248504941 248505660 -2182194 + L1MEc LINE L1 1038 1781 -4615 1931 121 0 3 chr2 248505737 248506019 -2181835 + AluSg SINE Alu 1 281 -29 191 217 0 22 chr2 248506162 248506208 -2181646 + L2 LINE L2 3223 3267 -5 288 345 75 23 chr2 248507932 248508106 -2179748 - MIR SINE MIR -20 242 60 2267 84 7 0 chr2 248508305 248508604 -2179250 + AluY SINE Alu 1 301 -10 189 0 0 0 chr2 248508646 248508667 -2179187 + (T)n Simple_repeat Simple_repeat 1 21 0 2098 145 10 48 chr2 248510268 248510661 -2177193 + MSTC LTR MaLR 51 428 0 1225 201 37 69 chr2 248510661 248511032 -2176822 + MLT1C LTR MaLR 69 427 -40 428 220 187 27 chr2 248511216 248511366 -2176488 - MER5A DNA MER1_type -1 188 15 457 155 12 0 chr2 248511432 248511516 -2176338 + MER5A DNA MER1_type 9 93 -96 188 227 133 55 chr2 248511457 248511585 -2176269 - MER5A DNA MER1_type -23 166 29 * 212 0 0 35 chr2 248511885 248511914 -2175940 + (GAAA)n Simple_repeat Simple_repeat 4 31 0 1886 191 17 0 chr2 248512114 248512464 -2175390 - MLT1A1 LTR MaLR 0 365 10 1182 244 106 82 chr2 248512749 248512866 -2174988 + L1MEc LINE L1 39 152 -6244 2482 70 0 0 chr2 248512866 248513164 -2174690 - AluY SINE Alu -12 299 2 1182 244 106 82 chr2 248513164 248513623 -2174231 + L1MEc LINE L1 152 629 -5767 195 155 17 35 chr2 248513757 248513815 -2174039 + (CA)n Simple_repeat Simple_repeat 1 57 0 213 184 26 13 chr2 248513907 248513983 -2173871 + (CA)n Simple_repeat Simple_repeat 2 78 0 189 293 13 27 chr2 248515342 248515417 -2172437 + MER5A DNA MER1_type 17 90 -99 203 324 157 0 chr2 248515500 248515608 -2172246 + MIR SINE MIR 119 243 -19 1450 208 89 3 chr2 248516617 248516953 -2170901 - MLT1A1 LTR MaLR 0 365 1 198 0 0 0 chr2 248517342 248517364 -2170490 + (A)n Simple_repeat Simple_repeat 1 22 0 871 273 7 3 chr2 248517406 248517706 -2170148 - AluYa5 SINE Alu 0 301 1 232 198 102 21 chr2 248518654 248518841 -2169013 - Zaphod DNA AcHobo -3096 935 734 * 590 246 113 0 chr2 248518839 248519034 -2168820 - Zaphod DNA AcHobo -3570 461 245 445 327 24 6 chr2 248520905 248521073 -2166781 - HERV16 LTR ERVL -2019 2977 2807 1685 154 52 39 chr2 248521094 248521424 -2166430 - MER1B DNA MER1_type -1 336 3 264 185 46 15 chr2 248521618 248521683 -2166171 - LTR16A1 LTR ERVL -330 127 61 537 237 153 109 chr2 248521791 248522158 -2165696 + MLT1A1 LTR MaLR 1 383 -13 1744 167 33 16 chr2 248523945 248524251 -2163603 + AluJb SINE Alu 1 311 -1 1404 80 0 35 chr2 248524258 248524273 -2163581 + AluSg/x SINE Alu 121 135 -177 2037 110 3 33 chr2 248524273 248524592 -2163262 + AluSx SINE Alu 1 312 0 1404 80 0 35 chr2 248524592 248524775 -2163079 + AluSg/x SINE Alu 135 312 0 289 241 36 62 chr2 248525150 248525262 -2162592 + MER5A DNA MER1_type 81 189 0 392 109 0 0 chr2 248525692 248525747 -2162107 - MSTC LTR MaLR -373 55 1 336 241 50 116 chr2 248526758 248526807 -2161047 + MARNA DNA Mariner 273 324 -262 1891 175 10 37 chr2 248526807 248527208 -2160646 + MLT1B LTR MaLR 1 390 0 336 241 50 116 chr2 248527208 248527264 -2160590 + MARNA DNA Mariner 324 382 -204 2080 114 14 3 chr2 248527264 248527553 -2160301 - AluSg SINE Alu -14 296 5 336 241 50 116 chr2 248527553 248527687 -2160167 + MARNA DNA Mariner 382 497 -89 259 316 44 29 chr2 248532403 248532539 -2155315 + MIR SINE MIR 94 231 -31 547 296 49 15 chr2 248532739 248532942 -2154912 + MER63A DNA MER1_type 1 210 0 343 255 189 33 chr2 248533181 248533393 -2154461 - L3 LINE CR1 0 1577 1333 222 343 14 0 chr2 248534552 248534622 -2153232 + MIR SINE MIR 17 87 -175 667 270 120 43 chr2 248535834 248536293 -2151561 - MLT1D LTR MaLR -7 619 1 573 376 65 12 chr2 248536536 248536907 -2150947 - L1 LINE L1 -1457 4689 4290 2377 143 46 12 chr2 248536907 248537321 -2150533 - MSTA LTR MaLR 0 428 1 573 376 65 12 chr2 248537321 248537379 -2150475 - L1 LINE L1 -1856 4290 4237 961 210 23 5 chr2 248538302 248538516 -2149338 - L1MC2 LINE L1 -189 6155 5938 285 323 10 0 chr2 248542234 248542330 -2145524 - MIR SINE MIR -76 132 36 261 299 86 0 chr2 248543862 248543979 -2143875 - MIR SINE MIR -90 172 46 712 168 23 0 chr2 248544942 248545073 -2142781 - FRAM SINE Alu -25 151 18 527 284 77 60 chr2 248546484 248546914 -2140940 + L1MEd LINE L1 564 1000 -5119 557 342 43 36 chr2 248547102 248547383 -2140471 + L1MEd LINE L1 547 829 -5290 1362 111 6 0 chr2 248547484 248547664 -2140190 + AluSc SINE Alu 115 295 -14 716 308 76 47 chr2 248547917 248549105 -2138749 + L1MEd LINE L1 447 1696 -4614 2149 256 110 50 chr2 248549197 248549416 -2138438 + L1MEd LINE L1 2426 2630 -3499 216 0 0 0 chr2 248549416 248549440 -2138414 + (TC)n Simple_repeat Simple_repeat 2 25 0 2149 256 110 50 chr2 248549440 248549833 -2138021 + L1MEd LINE L1 2630 2998 -3131 1992 109 8 8 chr2 248549833 248550100 -2137754 + AluSx SINE Alu 30 296 -16 2149 256 110 50 chr2 248550100 248550116 -2137738 + L1MEd LINE L1 2998 3012 -3117 11020 34 11 82 chr2 248550116 248551599 -2136255 + SVA Other Other 6 1383 -3 2149 256 110 50 chr2 248551599 248552067 -2135787 + L1MEd LINE L1 3012 3451 -2678 198 0 0 0 chr2 248552067 248552089 -2135765 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 2149 256 110 50 chr2 248552089 248552901 -2134953 + L1MEd LINE L1 3451 4516 -1613 210 240 0 0 chr2 248553718 248553768 -2134086 + MIR SINE MIR 168 217 -45 652 289 39 102 chr2 248554148 248554414 -2133440 + MLT1L LTR MaLR 34 315 -300 2130 109 11 11 chr2 248554414 248554697 -2133157 + AluSx SINE Alu 1 283 -29 652 289 39 102 chr2 248554697 248555049 -2132805 + MLT1L LTR MaLR 315 613 -2 261 148 0 37 chr2 248555400 248555454 -2132400 + MADE1 DNA Mariner 29 80 0 366 258 144 12 chr2 248556188 248556355 -2131499 + L2 LINE L2 3121 3309 -4 2160 164 31 35 chr2 248557794 248558277 -2129577 + L1MB3 LINE L1 5692 6172 -11 426 329 37 40 chr2 248558840 248559220 -2128634 - L1M4 LINE L1 -1447 4699 4321 1986 173 61 3 chr2 248559242 248559584 -2128270 - MLT1A1 LTR MaLR -1 364 3 1218 91 10 46 chr2 248559620 248559817 -2128037 - AluSc SINE Alu 0 309 120 770 110 0 0 chr2 248559918 248560018 -2127836 - AluY SINE Alu -217 101 2 564 266 74 58 chr2 248560152 248560614 -2127240 - L1M4 LINE L1 -1894 4252 3784 261 232 52 158 chr2 248560613 248560941 -2126913 - L1ME3A LINE L1 0 6170 5878 * 819 234 112 0 chr2 248561297 248561485 -2126369 - MER63A DNA MER1_type -1 209 1 1684 217 9 101 chr2 248561682 248562170 -2125684 - L1ME3A LINE L1 -743 5403 5329 1914 119 0 31 chr2 248562170 248562487 -2125367 + AluSx SINE Alu 1 308 0 1684 217 9 101 chr2 248562487 248562618 -2125236 - L1ME3A LINE L1 -817 5329 5188 23 0 0 0 chr2 248562976 248562999 -2124855 + AT_rich Low_complexity Low_complexity 1 23 0 465 267 78 51 chr2 248563702 248563919 -2123935 - MLT1J LTR MaLR -63 448 226 22 35 0 0 chr2 248564293 248564322 -2123532 + AT_rich Low_complexity Low_complexity 1 29 0 314 200 227 9 chr2 248564334 248564444 -2123410 + Charlie8 DNA MER1_type 88 221 -2196 28 29 0 0 chr2 248565360 248565395 -2122459 + AT_rich Low_complexity Low_complexity 1 35 0 241 86 0 0 chr2 248566244 248566279 -2121575 - MLT2B1 LTR ERVL 0 515 481 1718 198 27 2 chr2 248566327 248566740 -2121114 - MLT2B1 LTR ERVL -40 480 8 200 238 0 0 chr2 248567073 248567115 -2120739 + T-rich Low_complexity Low_complexity 1 42 0 202 121 30 0 chr2 248567748 248567781 -2120073 + GA-rich Low_complexity Low_complexity 2 35 0 260 341 22 22 chr2 248567900 248568035 -2119819 - L2 LINE L2 -186 3086 2952 476 325 23 33 chr2 248568883 248569188 -2118666 + L2 LINE L2 2034 2335 -979 464 352 41 69 chr2 248569243 248569739 -2118115 + L2 LINE L2 2795 3268 -4 241 176 39 0 chr2 248569794 248569845 -2118009 - L2 LINE L2 0 3313 3261 2005 217 50 84 chr2 248572762 248573015 -2114839 + L1MB5 LINE L1 5557 5817 -357 256 81 0 0 chr2 248573015 248573052 -2114802 + AluYa5 SINE Alu 98 134 -167 2233 84 0 16 chr2 248573052 248573363 -2114491 + AluY SINE Alu 1 306 -5 2005 217 50 84 chr2 248573363 248573592 -2114262 + L1MB5 LINE L1 5816 6052 -122 1820 153 0 20 chr2 248573592 248573887 -2113967 + AluJo SINE Alu 1 289 -23 2005 217 50 84 chr2 248573887 248574006 -2113848 + L1MB5 LINE L1 6052 6174 0 2239 73 0 3 chr2 248574015 248574323 -2113531 + AluY SINE Alu 1 311 0 239 189 14 54 chr2 248575034 248575108 -2112746 + MER5A DNA MER1_type 45 115 -74 23 0 0 0 chr2 248575779 248575802 -2112052 + AT_rich Low_complexity Low_complexity 1 23 0 1702 83 0 13 chr2 248575802 248576032 -2111822 - AluSx SINE Alu -36 276 50 2671 224 29 0 chr2 248576049 248576639 -2111215 - L1MB3 LINE L1 -11 6172 5566 693 150 18 0 chr2 248578877 248578990 -2108864 + L1PA13 LINE L1 6036 6150 -13 2228 130 42 33 chr2 248580287 248580648 -2107206 - THE1B LTR MaLR 0 364 1 249 355 24 16 chr2 248583306 248583430 -2104424 - MIR SINE MIR -10 252 128 198 424 73 6 chr2 248583988 248584165 -2103689 - L2 LINE L2 -4 3268 3080 1088 118 0 6 chr2 248585202 248585380 -2102474 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 730 233 37 0 chr2 248586064 248586227 -2101627 - MLT1E LTR MaLR 0 593 425 1957 128 0 3 chr2 248586330 248586612 -2101242 - AluSq SINE Alu -32 281 1 235 152 22 0 chr2 248586752 248586798 -2101056 + L2 LINE L2 3267 3313 0 2297 119 63 63 chr2 248586827 248587254 -2100600 + MSTA LTR MaLR 2 428 0 283 405 41 0 chr2 248588100 248588295 -2099559 - MIR SINE MIR -41 221 19 250 260 197 31 chr2 248589542 248589669 -2098185 + L2 LINE L2 3165 3312 -1 730 274 98 0 chr2 248590194 248590490 -2097364 - LTR16A LTR ERVL -18 432 108 1280 249 26 3 chr2 248590935 248591244 -2096610 - MLT2C1 LTR ERVL -79 318 3 264 30 0 0 chr2 248591312 248591345 -2096509 + (GA)n Simple_repeat Simple_repeat 1 33 0 200 167 0 0 chr2 248594766 248594796 -2093058 + (CCCG)n Simple_repeat Simple_repeat 2 31 0 1908 138 9 31 chr2 248598139 248598457 -2089397 - AluJo SINE Alu 0 312 2 891 275 46 55 chr2 248598461 248598732 -2089122 - L1ME3 LINE L1 -1 6161 5893 2021 104 24 0 chr2 248598732 248599030 -2088824 - AluSx SINE Alu -7 305 1 891 275 46 55 chr2 248599030 248599222 -2088632 - L1ME3 LINE L1 -269 5893 5701 268 274 51 20 chr2 248600793 248600908 -2086946 + MIR SINE MIR 34 151 -62 1048 204 123 43 chr2 248601739 248602102 -2085752 + MLT1C LTR MaLR 74 505 0 568 305 38 22 chr2 248602450 248602677 -2085177 + MIR SINE MIR 33 262 0 261 336 33 38 chr2 248604191 248604402 -2083452 + L2 LINE L2 2853 3062 -210 474 291 119 23 chr2 248604672 248604901 -2082953 + MIR SINE MIR 15 262 0 779 258 90 20 chr2 248604994 248605351 -2082503 + MLT1F1 LTR MaLR 1 382 -185 212 221 0 130 chr2 248605829 248605906 -2081948 + L2 LINE L2 3206 3272 0 223 309 44 39 chr2 248606312 248606516 -2081338 + L2 LINE L2 2830 3034 -238 344 293 66 0 chr2 248606572 248606678 -2081176 - L2 LINE L2 0 3313 3201 213 0 36 0 chr2 248607834 248607862 -2079992 + (TTTTA)n Simple_repeat Simple_repeat 2 180 0 2112 116 0 0 chr2 248607862 248608147 -2079707 - AluSx SINE Alu -27 285 1 684 319 44 16 chr2 248608306 248608554 -2079300 - MIR SINE MIR -1 261 7 908 259 234 18 chr2 248609500 248609898 -2077956 + MLT1D LTR MaLR 22 505 0 1273 254 76 15 chr2 248609976 248610386 -2077468 - L1MD2 LINE L1 -16 6343 5909 861 134 0 0 chr2 248610396 248610523 -2077331 - AluSq/x SINE Alu -185 127 1 350 164 0 0 chr2 248610523 248610584 -2077270 - L1MD2 LINE L1 -874 5485 5425 271 177 16 0 chr2 248610933 248610995 -2076859 - MIR SINE MIR -99 163 101 445 317 76 41 chr2 248611318 248611899 -2075955 - L1MEc LINE L1 -3176 3039 2439 682 325 113 53 chr2 248612031 248612673 -2075181 - L1MEc LINE L1 -3905 2312 1660 530 302 95 37 chr2 248614250 248614492 -2073362 - L1ME3A LINE L1 -83 6087 5832 626 305 99 0 chr2 248617200 248617462 -2070392 + LTR16A1 LTR ERVL 170 457 0 474 212 10 0 chr2 248617758 248617857 -2069997 - MER58A DNA MER1_type 0 136 37 1268 185 67 75 chr2 248617937 248618283 -2069571 - MER2 DNA MER2_type -1 343 1 1769 195 17 39 chr2 248619338 248619749 -2068105 - MLT1D LTR MaLR -99 406 5 1334 181 33 11 chr2 248619996 248620272 -2067582 - MLT1A1 LTR MaLR -83 282 1 1619 197 48 0 chr2 248620639 248620974 -2066880 + MLT1A1 LTR MaLR 2 352 -13 1632 164 3 17 chr2 248621263 248621555 -2066299 + AluSx SINE Alu 23 310 -2 302 219 137 0 chr2 248621557 248621630 -2066224 - MSTB LTR MaLR -65 361 279 2142 182 26 26 chr2 248622098 248622454 -2065400 + MSTA LTR MaLR 1 359 -69 1736 175 3 16 chr2 248622454 248622768 -2065086 - AluSx SINE Alu -2 310 1 2142 182 26 26 chr2 248622768 248622839 -2065015 + MSTA LTR MaLR 358 428 0 230 327 0 29 chr2 248623992 248624096 -2063758 + L1P LINE L1 4879 4979 -1167 497 311 27 5 chr2 248624263 248624482 -2063372 - LTR16A LTR ERVL -4 446 223 1006 157 60 32 chr2 248624490 248624707 -2063147 - AluJo SINE Alu -2 310 88 859 182 6 55 chr2 248628288 248628469 -2059385 - L1MB5 LINE L1 -9 6165 5994 216 176 0 0 chr2 248628704 248628738 -2059116 + MIR SINE MIR 78 111 -151 205 196 71 0 chr2 248629042 248629098 -2058756 + G-rich Low_complexity Low_complexity 1 60 0 861 266 25 0 chr2 248632180 248632383 -2055471 + MER63A DNA MER1_type 1 208 -2 183 42 0 0 chr2 248632501 248632525 -2055329 + (TG)n Simple_repeat Simple_repeat 1 24 0 306 87 0 0 chr2 248632525 248632571 -2055283 + (GA)n Simple_repeat Simple_repeat 2 47 0 891 154 6 6 chr2 248633707 248633863 -2053991 - L1PA14 LINE L1 -2 6159 6004 273 302 95 0 chr2 248634205 248634321 -2053533 + MIR SINE MIR 70 196 -66 230 325 8 24 chr2 248636674 248636767 -2051087 + (CGTG)n Simple_repeat Simple_repeat 1 93 -31 1877 156 126 28 chr2 248636767 248637157 -2050697 - MSTA LTR MaLR 0 428 1 230 325 8 24 chr2 248637157 248637189 -2050665 + (CGTG)n Simple_repeat Simple_repeat 93 124 0 225 273 0 30 chr2 248637245 248637377 -2050477 + (TATATG)n Simple_repeat Simple_repeat 1 128 0 429 350 0 27 chr2 248637385 248637568 -2050286 + (TG)n Simple_repeat Simple_repeat 1 178 0 1596 200 48 0 chr2 248638499 248638834 -2049020 - MLT1A1 LTR MaLR -13 352 2 1882 219 17 6 chr2 248639201 248639562 -2048292 + MLT1A1 LTR MaLR 1 365 0 258 32 0 0 chr2 248639620 248639651 -2048203 + (TG)n Simple_repeat Simple_repeat 1 31 0 1326 211 33 44 chr2 248640779 248641168 -2046686 + MLT1D LTR MaLR 5 389 -116 262 377 19 19 chr2 248642049 248642188 -2045666 + L2 LINE L2 2914 3055 -217 1732 152 17 7 chr2 248642188 248642484 -2045370 - AluSx SINE Alu -2 310 12 262 377 19 19 chr2 248642484 248642498 -2045356 + L2 LINE L2 3054 3067 -205 27 0 0 0 chr2 248642728 248642755 -2045099 + AT_rich Low_complexity Low_complexity 1 27 0 1342 283 24 5 chr2 248643042 248643572 -2044282 - L1P4 LINE L1 -706 5460 4924 1513 212 28 64 chr2 248643580 248643795 -2044059 - L1 LINE L1 -2358 3788 3567 1479 193 20 23 chr2 248643795 248644115 -2043739 + AluJb SINE Alu 1 312 0 1513 212 28 64 chr2 248644115 248644400 -2043454 - L1 LINE L1 -2579 3567 3306 327 316 93 7 chr2 248647573 248647712 -2040142 - L1M4 LINE L1 -907 5239 5089 2724 195 32 44 chr2 248650061 248650116 -2037738 - L1MB3 LINE L1 -10 6173 6119 2481 65 0 0 chr2 248650116 248650425 -2037429 - AluY SINE Alu -2 309 1 2724 195 32 44 chr2 248650425 248650985 -2036869 - L1MB3 LINE L1 -64 6119 5565 295 206 93 62 chr2 248651555 248651652 -2036202 + L1MA10 LINE L1 6227 6326 -8 419 111 44 50 chr2 248651863 248652043 -2035811 + (CA)n Simple_repeat Simple_repeat 1 179 0 287 167 54 6 chr2 248652079 248652247 -2035607 + (CA)n Simple_repeat Simple_repeat 1 176 0 233 229 119 0 chr2 248653582 248653691 -2034163 + L2 LINE L2 2939 3060 -212 528 263 63 15 chr2 248654400 248654605 -2033249 + LTR16A1 LTR ERVL 178 392 -65 807 281 134 16 chr2 248656517 248656890 -2030964 - MLT1G1 LTR MaLR -11 584 168 903 251 159 20 chr2 248658038 248658384 -2029470 - MLT2B2 LTR ERVL -1 514 121 2395 138 22 0 chr2 248659237 248659593 -2028261 - THE1B LTR MaLR 0 364 1 788 128 32 0 chr2 248660186 248660311 -2027543 + AluY SINE Alu 4 132 -179 207 339 127 23 chr2 248661041 248661301 -2026553 + L2 LINE L2 1334 1620 -1694 531 284 116 0 chr2 248662138 248662370 -2025484 + LTR16A1 LTR ERVL 189 447 -10 440 212 10 0 chr2 248662675 248662774 -2025080 - MER58A DNA MER1_type 0 136 37 1100 212 58 64 chr2 248662854 248663199 -2024655 - MER2 DNA MER2_type -1 343 1 202 337 37 80 chr2 248663789 248663976 -2023878 - L3 LINE CR1 -130 1447 1269 306 281 267 14 chr2 248666014 248666366 -2021488 + MLT1H LTR MaLR 109 549 0 1934 193 32 3 chr2 248667436 248667814 -2020040 - MLT1B LTR MaLR -1 389 1 1944 138 13 7 chr2 248667926 248668231 -2019623 - AluSx SINE Alu -5 307 1 835 246 30 111 chr2 248668231 248668726 -2019128 + LTR37B LTR ERV1 7 461 -7 23 0 0 0 chr2 248669052 248669075 -2018779 + AT_rich Low_complexity Low_complexity 1 23 0 478 271 62 24 chr2 248670021 248670231 -2017623 - MLT1G1 LTR MaLR -287 218 1 268 303 106 8 chr2 248670425 248670557 -2017297 - L2 LINE L2 -520 2794 2650 185 348 33 57 chr2 248671990 248672289 -2015565 - L2 LINE L2 -706 2608 2317 259 296 71 41 chr2 248674713 248674882 -2012972 - L2 LINE L2 -209 3104 2931 2151 131 3 0 chr2 248675513 248675819 -2012035 + AluSx SINE Alu 1 307 -5 262 406 59 15 chr2 248679324 248679526 -2008328 - MIR SINE MIR -50 212 2 522 225 0 0 chr2 248679907 248680049 -2007805 + (CA)n Simple_repeat Simple_repeat 1 142 0 292 206 10 10 chr2 248680062 248680159 -2007695 + (CA)n Simple_repeat Simple_repeat 2 98 0 398 227 6 23 chr2 248680182 248680354 -2007500 + (CATATA)n Simple_repeat Simple_repeat 3 171 0 224 279 0 0 chr2 248680355 248680416 -2007438 + (CA)n Simple_repeat Simple_repeat 2 62 0 201 333 0 16 chr2 248680782 248680845 -2007009 - L2 LINE L2 0 3272 3211 642 277 246 8 chr2 248681024 248681507 -2006347 - L2 LINE L2 -337 2977 2380 316 267 22 0 chr2 248682976 248683066 -2004788 - L2 LINE L2 -1048 2266 2175 213 336 39 19 chr2 248683887 248683991 -2003863 - L2 LINE L2 -643 2671 2566 1472 191 111 52 chr2 248684853 248685069 -2002785 + MLT1D LTR MaLR 1 203 -302 2332 206 54 2 chr2 248685069 248685531 -2002323 - MER66B LTR ERV1 0 486 1 1472 191 111 52 chr2 248685531 248685791 -2002063 + MLT1D LTR MaLR 203 505 0 394 309 22 0 chr2 248686141 248686280 -2001574 + LTR53 LTR ERVL 367 508 -11 2284 163 64 10 chr2 248686376 248686780 -2001074 + MSTB LTR MaLR 1 426 0 1319 213 131 72 chr2 248686787 248687275 -2000579 - MLT2B1 LTR ERVL -2 518 2 209 337 29 64 chr2 248688321 248688493 -1999361 + L2 LINE L2 2917 3082 -190 255 122 0 0 chr2 248688593 248688642 -1999212 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 904 225 25 4 chr2 248690650 248690926 -1996928 - L1 LINE L1 -2912 3234 2953 1427 193 26 7 chr2 248690937 248691243 -1996611 + MLT1B LTR MaLR 78 389 -1 245 235 24 0 chr2 248691666 248691759 -1996095 + MIR SINE MIR 48 144 -64 214 171 0 0 chr2 248691934 248691969 -1995885 + (TG)n Simple_repeat Simple_repeat 2 36 0 896 279 37 5 chr2 248692149 248692364 -1995490 - MER58A DNA MER1_type -2 222 1 267 286 48 9 chr2 248692609 248692714 -1995140 - MIR SINE MIR -49 213 105 228 343 113 77 chr2 248693767 248693900 -1993954 + L2 LINE L2 2921 3048 -265 2327 98 7 0 chr2 248693900 248694206 -1993648 - AluSx SINE Alu -2 310 3 228 343 113 77 chr2 248694206 248694451 -1993403 + L2 LINE L2 3048 3313 0 2230 77 0 3 chr2 248694548 248694877 -1992977 - AluSq SINE Alu 0 328 1 234 330 22 22 chr2 248695272 248695363 -1992491 - L2 LINE L2 0 3313 3223 224 321 118 27 chr2 248695552 248695739 -1992115 + MIR SINE MIR 59 262 0 258 32 0 0 chr2 248696378 248696409 -1991445 + (T)n Simple_repeat Simple_repeat 1 31 0 253 321 24 42 chr2 248697158 248697323 -1990531 + LTR67 LTR ERVL 393 554 -3 1731 225 29 3 chr2 248700115 248700466 -1987388 - MLT1A1 LTR MaLR -3 362 3 262 253 27 13 chr2 248700815 248700890 -1986964 - LTR16C LTR ERVL -245 246 171 1047 253 19 8 chr2 248701592 248701853 -1986001 + MLT1F1 LTR MaLR 304 567 0 805 163 141 0 chr2 248702328 248702512 -1985342 + MLT1E LTR MaLR 384 593 0 321 357 70 22 chr2 248702696 248702881 -1984973 + MIR SINE MIR 64 257 -5 297 344 78 8 chr2 248703885 248704013 -1983841 + MIR3 SINE MIR 20 156 -52 4544 175 48 28 chr2 248704479 248704668 -1983186 + MER49 LTR ERV1 5 189 -734 2224 125 0 0 chr2 248704668 248704972 -1982882 + AluSx SINE Alu 1 304 -8 4544 175 48 28 chr2 248704972 248705683 -1982171 + MER49 LTR ERV1 189 923 0 573 291 52 15 chr2 248705894 248706162 -1981692 - LTR16A1 LTR ERVL -2 455 178 251 255 113 0 chr2 248706866 248706997 -1980857 - L2 LINE L2 -207 3065 2922 511 141 40 26 chr2 248708332 248708759 -1979095 + (TG)n Simple_repeat Simple_repeat 1 433 0 491 62 31 98 chr2 248709717 248709910 -1977944 + (TG)n Simple_repeat Simple_repeat 1 180 0 336 166 40 11 chr2 248709924 248710099 -1977755 + (TG)n Simple_repeat Simple_repeat 1 180 0 433 143 46 19 chr2 248710113 248710594 -1977260 + (TG)n Simple_repeat Simple_repeat 1 494 0 291 196 93 62 chr2 248710768 248710865 -1976989 - L1MA10 LINE L1 -8 6326 6227 2178 103 3 3 chr2 248711749 248712061 -1975793 - AluSx SINE Alu 0 312 1 430 327 60 18 chr2 248712071 248712352 -1975502 - L1ME1 LINE L1 -153 6013 5721 952 239 142 27 chr2 248712368 248712819 -1975035 - L1MEc LINE L1 -5597 799 297 611 284 28 9 chr2 248712822 248713033 -1974821 - L1MEc LINE L1 -6147 249 35 277 260 120 50 chr2 248713245 248713487 -1974367 - L1ME1 LINE L1 -1487 4659 4401 1773 156 86 9 chr2 248713526 248713865 -1973989 - MLT1A1 LTR MaLR 0 365 1 316 249 50 126 chr2 248714002 248714263 -1973591 - L1ME1 LINE L1 -1990 4156 3916 553 254 160 52 chr2 248714280 248714662 -1973192 + L1MD1 LINE L1 17 439 -6101 306 295 40 60 chr2 248715145 248715294 -1972560 + L1MD1 LINE L1 582 727 -5813 2907 247 47 19 chr2 248715442 248716158 -1971696 + L1MD1 LINE L1 1001 1696 -4844 1978 141 0 0 chr2 248716158 248716456 -1971398 + AluSq SINE Alu 1 298 -15 2907 247 47 19 chr2 248716456 248717376 -1970478 + L1MD1 LINE L1 1696 3685 -2855 270 308 23 0 chr2 248717383 248717513 -1970341 + L1MD1 LINE L1 3767 3899 -2641 4402 208 46 39 chr2 248717516 248718724 -1969130 + L1MD1 LINE L1 5243 6440 -196 2218 53 7 20 chr2 248718724 248719025 -1968829 + AluY SINE Alu 1 297 -14 4402 208 46 39 chr2 248719025 248719064 -1968790 + L1MD1 LINE L1 6440 6477 -159 1746 137 10 33 chr2 248719064 248719371 -1968483 - AluJb SINE Alu -11 301 2 4402 208 46 39 chr2 248719371 248719557 -1968297 + L1MD1 LINE L1 6477 6636 0 21 0 0 0 chr2 248720171 248720192 -1967662 + AT_rich Low_complexity Low_complexity 1 21 0 16626 143 19 12 chr2 248720465 248722344 -1965510 - Tigger4(Zombi) DNA MER2_type 0 2731 826 2157 97 20 0 chr2 248722344 248722644 -1965210 + AluSq SINE Alu 1 306 -7 16626 143 19 12 chr2 248722644 248723475 -1964379 - Tigger4(Zombi) DNA MER2_type -1905 826 2 342 273 61 38 chr2 248723531 248723663 -1964191 - HAL1b LINE L1 -503 845 711 411 250 83 7 chr2 248723675 248723819 -1964035 - HAL1b LINE L1 -679 669 515 803 305 112 88 chr2 248723890 248724394 -1963460 - HAL1b LINE L1 -964 1462 1 481 141 15 37 chr2 248725050 248725185 -1962669 + C-rich Low_complexity Low_complexity 5 136 0 475 164 11 50 chr2 248725239 248725521 -1962333 + C-rich Low_complexity Low_complexity 1 270 0 524 141 6 59 chr2 248725541 248725711 -1962143 + C-rich Low_complexity Low_complexity 2 162 0 426 252 40 0 chr2 248725732 248725883 -1961971 + CT-rich Low_complexity Low_complexity 3 159 0 207 100 0 0 chr2 248726022 248726052 -1961802 + (TCCC)n Simple_repeat Simple_repeat 2 31 0 2226 76 23 0 chr2 248726052 248726353 -1961501 - AluSq SINE Alu -5 308 1 303 300 33 0 chr2 248729266 248729356 -1958498 - MIR SINE MIR -109 153 61 342 243 14 0 chr2 248730241 248730311 -1957543 - LTR16C LTR ERVL 0 491 421 633 289 42 5 chr2 248731236 248731426 -1956428 + MIR SINE MIR 66 262 0 410 177 44 35 chr2 248731514 248731627 -1956227 - LTR33A LTR ERVL -5 518 405 1876 157 6 6 chr2 248731839 248732151 -1955703 + AluSx SINE Alu 1 312 0 286 204 265 0 chr2 248733608 248733706 -1954148 - MER5C DNA MER1_type -74 250 127 542 292 88 31 chr2 248733880 248734185 -1953669 + MLT1E LTR MaLR 1 383 -212 1092 225 63 22 chr2 248734385 248734656 -1953198 + MLT1E LTR MaLR 312 593 0 4455 166 49 1 chr2 248736732 248737535 -1950319 + L1MB3 LINE L1 5334 6174 -9 370 273 23 23 chr2 248738396 248738524 -1949330 + CT-rich Low_complexity Low_complexity 1 128 0 28 0 0 0 chr2 248738838 248738866 -1948988 + AT_rich Low_complexity Low_complexity 1 28 0 473 177 0 0 chr2 248739335 248739414 -1948440 - MADE1 DNA Mariner 0 80 2 898 271 68 43 chr2 248742541 248742984 -1944870 + LTR16B LTR ERVL 1 454 -10 1578 265 113 14 chr2 248743079 248743585 -1944269 - L1ME3A LINE L1 0 6104 5650 234 0 0 0 chr2 248743585 248743611 -1944243 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2035 121 0 0 chr2 248743610 248743916 -1943938 - AluSx SINE Alu 0 306 1 1578 265 113 14 chr2 248743916 248744025 -1943829 - L1ME3A LINE L1 -759 5345 5429 185 240 13 0 chr2 248744033 248744108 -1943746 + (TA)n Simple_repeat Simple_repeat 2 77 0 583 254 103 21 chr2 248744127 248744471 -1943383 - L1ME3A LINE L1 -693 5407 5040 374 227 68 53 chr2 248744474 248744606 -1943248 + L2 LINE L2 3168 3301 -12 433 249 91 77 chr2 248744611 248744626 -1943228 - L1ME3A LINE L1 -1015 5065 5052 922 123 78 0 chr2 248744626 248744780 -1943074 - L1MA5 LINE L1 -2 6298 6133 433 249 91 77 chr2 248744780 248744934 -1942920 - L1ME3A LINE L1 -1028 5052 4902 1281 203 77 0 chr2 248744934 248745215 -1942639 + AluJb SINE Alu 1 301 0 433 249 91 77 chr2 248745215 248745460 -1942394 - L1ME3A LINE L1 -1178 4902 4643 620 269 196 37 chr2 248745507 248745916 -1941938 + MLT1H1 LTR MaLR 78 551 -4 683 249 119 40 chr2 248745917 248746271 -1941583 - L1ME3A LINE L1 -1430 4650 4269 28 29 0 0 chr2 248746271 248746306 -1941548 + AT_rich Low_complexity Low_complexity 1 35 0 1259 257 90 43 chr2 248746320 248746544 -1941310 - L1MEc LINE L1 -3382 2698 2486 2044 140 0 0 chr2 248746544 248746844 -1941010 + AluSx SINE Alu 5 304 -8 1259 257 90 43 chr2 248746844 248747260 -1940594 - L1MEc LINE L1 -3594 2486 2042 1998 121 24 0 chr2 248747260 248747550 -1940304 - AluSx SINE Alu -15 297 1 1259 257 90 43 chr2 248747550 248747886 -1939968 - L1MEc LINE L1 -4038 2042 1723 674 288 96 47 chr2 248747938 248748857 -1938997 - L1MEc LINE L1 -4641 1620 657 409 159 11 11 chr2 248748896 248748984 -1938870 + (TA)n Simple_repeat Simple_repeat 2 89 0 437 306 84 81 chr2 248749117 248749639 -1938215 - L1MEc LINE L1 -5542 528 5 221 286 160 17 chr2 248750000 248750119 -1937735 + MIR3 SINE MIR 68 203 -5 198 338 59 0 chr2 248750516 248750584 -1937270 + L2 LINE L2 2703 2774 -540 253 369 86 4 chr2 248750636 248750904 -1936950 + L2 LINE L2 2881 3170 -143 687 308 4 15 chr2 248751172 248751432 -1936422 - L1ME2 LINE L1 -205 5959 5703 402 228 22 59 chr2 248751514 248751650 -1936204 + L2 LINE L2 3142 3272 0 436 195 24 0 chr2 248752337 248752419 -1935435 + MLT1B LTR MaLR 3 86 -381 669 210 25 25 chr2 248752445 248752602 -1935252 - L1PB4 LINE L1 0 6156 6000 5135 160 49 15 chr2 248752677 248753146 -1934708 - L1PA16 LINE L1 -9 6157 5705 2181 109 0 0 chr2 248753146 248753457 -1934397 - AluSx SINE Alu -1 311 1 5135 160 49 15 chr2 248753457 248754181 -1933673 - L1PA16 LINE L1 -461 5705 4924 2948 193 26 67 chr2 248754189 248754404 -1933450 - L1 LINE L1 -2358 3788 3566 1468 192 22 0 chr2 248754404 248754680 -1933174 + AluJb SINE Alu 1 282 -30 189 0 0 0 chr2 248754683 248754704 -1933150 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 2948 193 26 67 chr2 248754704 248755355 -1932499 - L1 LINE L1 -2582 3564 2953 1575 193 26 7 chr2 248755366 248755672 -1932182 + MLT1B LTR MaLR 78 389 -1 245 235 24 0 chr2 248756098 248756191 -1931663 + MIR SINE MIR 48 144 -64 214 171 0 0 chr2 248756366 248756401 -1931453 + (TG)n Simple_repeat Simple_repeat 2 36 0 965 266 37 0 chr2 248756585 248756799 -1931055 - MER58A DNA MER1_type -2 222 1 964 281 152 11 chr2 248757774 248758240 -1929614 + L1MD1 LINE L1 5532 6063 -179 2402 138 95 5 chr2 248758319 248758710 -1929144 - MSTA LTR MaLR -2 426 1 1141 229 16 26 chr2 248760315 248760620 -1927234 - MLT1D LTR MaLR -2 503 202 226 291 0 0 chr2 248760745 248760800 -1927054 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 300 275 18 0 chr2 248760811 248760982 -1926872 + (TCCA)n Simple_repeat Simple_repeat 1 174 0 395 256 23 0 chr2 248761010 248761186 -1926668 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 472 253 12 0 chr2 248761218 248761384 -1926470 + (TCCA)n Simple_repeat Simple_repeat 1 168 0 780 167 6 11 chr2 248761404 248761584 -1926270 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 607 212 0 27 chr2 248761628 248761812 -1926042 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 502 139 10 10 chr2 248761832 248761933 -1925921 + (TCCA)n Simple_repeat Simple_repeat 3 103 0 214 364 73 0 chr2 248761938 248762089 -1925765 - L2 LINE L2 0 3313 3152 229 380 41 0 chr2 248762477 248762598 -1925256 + MIR SINE MIR 104 229 -33 350 344 68 12 chr2 248767750 248767913 -1919941 + MIR SINE MIR 60 231 -31 243 271 42 42 chr2 248769501 248769597 -1918257 - L2 LINE L2 -20 3252 3157 1056 290 57 61 chr2 248770146 248770816 -1917038 - L1MC5 LINE L1 -389 7572 6906 300 282 82 18 chr2 248771974 248772084 -1915770 + L1MC4 LINE L1 6588 6704 -1338 441 116 21 53 chr2 248772598 248772693 -1915161 + MER4A LTR ERV1 1 92 -572 * 1744 115 143 25 chr2 248772690 248773055 -1914799 + MER4A LTR ERV1 257 664 0 271 275 119 9 chr2 248773102 248773211 -1914643 + L1ME1 LINE L1 5636 5756 -410 587 304 50 7 chr2 248773271 248773551 -1914303 + L1ME1 LINE L1 5871 6162 -4 364 247 0 11 chr2 248774428 248774517 -1913337 - MER81 DNA DNA -24 90 3 255 314 154 23 chr2 248775603 248775778 -1912076 + L2 LINE L2 3109 3306 -7 557 296 104 4 chr2 248776171 248776441 -1911413 - L1M4 LINE L1 -2885 3261 2965 1354 292 14 7 chr2 248776446 248776877 -1910977 - L1ME2 LINE L1 -59 6105 5672 311 325 111 39 chr2 248777059 248777293 -1910561 - L2 LINE L2 0 3272 3022 241 225 9 9 chr2 248777538 248777649 -1910205 + (TG)n Simple_repeat Simple_repeat 1 111 0 363 286 0 0 chr2 248777711 248778159 -1909695 + (TG)n Simple_repeat Simple_repeat 1 448 0 744 87 72 18 chr2 248778243 248778578 -1909276 + (CTGGGG)n Simple_repeat Simple_repeat 1 353 0 766 64 71 4 chr2 248778744 248779036 -1908818 + (CTGGGG)n Simple_repeat Simple_repeat 1 311 0 192 107 0 0 chr2 248781482 248781510 -1906344 + MIR SINE MIR 117 144 -118 2661 96 27 8 chr2 248781894 248782259 -1905595 + THE1C LTR MaLR 4 375 0 245 346 19 10 chr2 248782297 248782401 -1905453 - MIR SINE MIR -71 137 33 290 298 6 42 chr2 248784122 248784290 -1903564 + GA-rich Low_complexity Low_complexity 1 162 0 208 144 0 87 chr2 248784300 248784404 -1903450 + (AGGGGG)n Simple_repeat Simple_repeat 6 100 0 209 313 222 7 chr2 248785433 248785577 -1902277 - MIR SINE MIR -1 261 87 203 186 0 68 chr2 248785657 248785716 -1902138 - MIR SINE MIR -145 117 63 204 156 49 75 chr2 248785847 248785946 -1901908 - MIR SINE MIR -89 119 20 209 244 0 12 chr2 248792120 248792202 -1895652 + (CA)n Simple_repeat Simple_repeat 1 81 0 374 290 7 0 chr2 248792213 248792504 -1895350 + (CA)n Simple_repeat Simple_repeat 1 293 0 199 293 86 35 chr2 248792619 248792735 -1895119 + MIR3 SINE MIR 3 124 -84 279 273 101 10 chr2 248794250 248794349 -1893505 + MIR3 SINE MIR 86 193 -15 254 374 0 0 chr2 248796328 248796499 -1891355 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 277 328 0 38 chr2 248796664 248796850 -1891004 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 293 363 0 0 chr2 248797239 248797410 -1890444 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 207 218 109 50 chr2 248798105 248798206 -1889648 + MIR SINE MIR 31 137 -125 264 227 164 18 chr2 248798775 248798885 -1888969 - MIR SINE MIR -63 145 20 635 191 0 16 chr2 248800029 248800212 -1887642 + (CA)n Simple_repeat Simple_repeat 1 180 0 219 170 0 0 chr2 248800225 248800272 -1887582 + (CA)n Simple_repeat Simple_repeat 2 48 0 1959 94 4 0 chr2 248801218 248801474 -1886380 - AluSx SINE Alu -55 257 1 280 292 124 9 chr2 248802160 248802273 -1885581 + MER5C DNA MER1_type 195 320 -4 819 342 89 54 chr2 248802562 248803121 -1884733 + L1ME4a LINE L1 5290 5868 -253 615 148 19 0 chr2 248803439 248803547 -1884307 + L1MC3 LINE L1 6649 6758 -1027 663 273 55 41 chr2 248803547 248803818 -1884036 + MLT1D LTR MaLR 223 497 -8 368 337 115 24 chr2 248804744 248805330 -1882524 - L2 LINE L2 -583 2731 2070 21 0 0 0 chr2 248805625 248805646 -1882208 + AT_rich Low_complexity Low_complexity 1 21 0 1084 196 55 65 chr2 248805848 248806189 -1881665 + L1MB8 LINE L1 4214 4552 -1594 1208 245 40 45 chr2 248806189 248806585 -1881269 + MLT2C1 LTR ERVL 4 397 0 1084 196 55 65 chr2 248806585 248806642 -1881212 + L1MB8 LINE L1 4552 4608 -1538 2417 221 77 9 chr2 248806655 248807630 -1880224 + L1MB8 LINE L1 5111 6172 -8 225 141 34 47 chr2 248807633 248807782 -1880072 + (TA)n Simple_repeat Simple_repeat 1 147 0 37 52 0 0 chr2 248807795 248807853 -1880001 + AT_rich Low_complexity Low_complexity 1 58 0 354 291 102 40 chr2 248807853 248808144 -1879710 + L1MCa LINE L1 1931 6244 -157 219 212 61 0 chr2 248808144 248808243 -1879611 + (TA)n Simple_repeat Simple_repeat 2 106 0 389 181 24 0 chr2 248808253 248808336 -1879518 + L1MB7 LINE L1 6092 6176 -8 1311 72 0 0 chr2 248808537 248808717 -1879137 + (CAGGG)n Simple_repeat Simple_repeat 1 180 0 1265 124 0 3 chr2 248808728 248809070 -1878784 + (CAGGG)n Simple_repeat Simple_repeat 1 340 0 429 276 0 4 chr2 248809103 248809358 -1878496 + (CAGGG)n Simple_repeat Simple_repeat 1 253 0 312 136 0 0 chr2 248809852 248809896 -1877958 + Alu SINE Alu 1 44 -258 2088 125 4 0 chr2 248809896 248810204 -1877650 + AluSx SINE Alu 1 309 0 1330 218 73 24 chr2 248810627 248811053 -1876801 + MER69 DNA AcHobo 1954 2400 -126 943 275 165 20 chr2 248811436 248811884 -1875970 - MLT1G1 LTR MaLR -7 588 76 1302 286 63 60 chr2 248812871 248813456 -1874398 + MLT1E LTR MaLR 1 587 -6 231 281 49 0 chr2 248813676 248813758 -1874096 - MLT1J LTR MaLR 0 511 426 265 256 44 11 chr2 248813926 248814016 -1873838 - MLT1L LTR MaLR -327 288 196 214 237 11 0 chr2 248815657 248815723 -1872131 - MIR SINE MIR -67 141 98 313 250 48 0 chr2 248816192 248816276 -1871578 + MLT1G1 LTR MaLR 498 585 -10 658 243 40 27 chr2 248818752 248818974 -1868880 - L1MB8 LINE L1 -1 6177 5953 632 295 93 60 chr2 248819029 248819544 -1868310 + MER45C DNA AcHobo 4 535 -418 288 263 53 21 chr2 248819601 248819696 -1868158 + MER45C DNA AcHobo 703 800 -153 303 200 47 24 chr2 248821577 248821662 -1866192 + Charlie8 DNA MER1_type 115 201 -2216 409 246 79 8 chr2 248822566 248822692 -1865162 - L1ME3A LINE L1 -5 6165 6031 391 317 42 12 chr2 248823052 248823219 -1864635 - L1ME3A LINE L1 -234 5936 5765 368 347 73 53 chr2 248823675 248823920 -1863934 - L1MDa LINE L1 -4164 2557 2308 547 273 69 62 chr2 248824147 248824249 -1863605 - L1MDa LINE L1 -4474 2066 1966 2281 108 0 0 chr2 248824249 248824544 -1863310 + AluSx SINE Alu 1 295 -17 231 36 0 0 chr2 248824554 248824582 -1863272 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 547 273 69 62 chr2 248824582 248824814 -1863040 - L1MDa LINE L1 -4582 1958 1746 3167 231 59 18 chr2 248824935 248826745 -1861109 - L1MDa LINE L1 -3010 3530 1648 1335 250 75 36 chr2 248826851 248827041 -1860813 - L1MDa LINE L1 -5046 1494 1313 2144 147 3 3 chr2 248827041 248827353 -1860501 - AluJb SINE Alu 0 312 1 1335 250 75 36 chr2 248827353 248827745 -1860109 - L1MDa LINE L1 -5227 1313 889 344 293 62 43 chr2 248827798 248828006 -1859848 - MLT1L LTR MaLR -2 613 298 2126 167 41 35 chr2 248831437 248831544 -1856310 + MLT1C LTR MaLR 2 107 -360 1575 121 84 153 chr2 248831544 248831832 -1856022 - MER65A LTR ERV1 0 445 201 2527 66 0 0 chr2 248831832 248832134 -1855720 - AluY SINE Alu -9 302 1 1575 121 84 153 chr2 248832134 248832323 -1855531 - MER65A LTR ERV1 -244 201 1 2126 167 41 35 chr2 248832323 248832675 -1855179 + MLT1C LTR MaLR 107 464 -3 345 276 8 8 chr2 248834473 248834596 -1853258 + L1M4 LINE L1 4487 4609 -1537 1313 317 60 29 chr2 248834627 248835239 -1852615 + L1M2c LINE L1 8 638 -6151 3771 217 38 25 chr2 248835671 248836673 -1851181 + L1M2c LINE L1 1320 2334 -4455 472 347 0 0 chr2 248839439 248839609 -1848245 + (CA)n Simple_repeat Simple_repeat 1 170 0 243 289 0 0 chr2 248839637 248839765 -1848089 + (CA)n Simple_repeat Simple_repeat 1 128 0 457 231 100 65 chr2 248841082 248841311 -1846543 + LTR33A LTR ERVL 13 249 -274 531 239 52 0 chr2 248841380 248841514 -1846340 + LTR33A LTR ERVL 383 523 0 4004 232 68 51 chr2 248842732 248843108 -1844746 + Charlie1a DNA MER1_type 48 416 -2345 1834 184 0 0 chr2 248843108 248843407 -1844447 - AluJo SINE Alu -13 299 1 4004 232 68 51 chr2 248843407 248844414 -1843440 + Charlie1a DNA MER1_type 416 1455 0 457 331 6 17 chr2 248850166 248850347 -1837507 - MIR SINE MIR -26 236 58 568 280 163 46 chr2 248851098 248851657 -1836197 - L1MDa LINE L1 -3531 3009 2369 262 333 54 40 chr2 248851973 248852477 -1835377 - HAL1 LINE L1 -823 1684 1174 308 83 21 0 chr2 248852594 248852642 -1835212 + (CA)n Simple_repeat Simple_repeat 1 49 0 216 135 0 0 chr2 248852650 248852687 -1835167 + (TG)n Simple_repeat Simple_repeat 2 38 0 304 310 55 65 chr2 248852692 248852892 -1834962 - HAL1 LINE L1 -1456 1051 854 559 264 111 60 chr2 248853296 248853811 -1834043 - L1MDa LINE L1 -5025 1696 1156 231 234 0 39 chr2 248854838 248854915 -1832939 + MIR SINE MIR 54 127 -135 1860 146 17 17 chr2 248855541 248855835 -1832019 + AluJb SINE Alu 1 294 -18 220 351 113 58 chr2 248856454 248856782 -1831072 - L2 LINE L2 0 3272 2927 359 267 0 9 chr2 248857042 248857158 -1830696 - L1MC4 LINE L1 0 8042 7928 209 83 28 0 chr2 248857165 248857201 -1830653 + (TAGA)n Simple_repeat Simple_repeat 1 37 0 2047 144 18 12 chr2 248857257 248857597 -1830257 + MER2 DNA MER2_type 2 343 -1 264 30 0 0 chr2 248857607 248857640 -1830214 + (CA)n Simple_repeat Simple_repeat 2 34 0 1129 257 180 49 chr2 248857642 248857829 -1830025 - L1MC4 LINE L1 -132 7910 7749 2257 131 0 0 chr2 248857829 248858134 -1829720 - AluSx SINE Alu -7 305 1 1129 257 180 49 chr2 248858134 248858790 -1829064 - L1MC4 LINE L1 -293 7749 6906 281 305 42 36 chr2 248859204 248859371 -1828483 + L1ME LINE L1 5567 5734 -387 1656 163 7 36 chr2 248860338 248860644 -1827210 + AluJo SINE Alu 4 300 -12 319 313 96 53 chr2 248860791 248860999 -1826855 + L1MEd LINE L1 437 653 -5466 3121 227 17 33 chr2 248863497 248864335 -1823519 - L1MB8 LINE L1 0 6178 5355 200 289 64 70 chr2 248865219 248865375 -1822479 - MIR3 SINE MIR -23 185 31 2124 252 113 12 chr2 248866526 248867344 -1820510 - L1MD2 LINE L1 -15 6344 5445 313 291 196 48 chr2 248867614 248867930 -1819924 + L2 LINE L2 2951 3313 0 3232 131 35 15 chr2 248867969 248868488 -1819366 - MER1A DNA MER1_type 0 529 1 1229 233 68 34 chr2 248869114 248869557 -1818297 - Charlie1a DNA MER1_type -17 1438 981 3158 182 55 12 chr2 248869582 248870111 -1817743 - L1MB1 LINE L1 -1 6167 5605 2112 135 23 0 chr2 248870111 248870414 -1817440 - AluSx SINE Alu -2 310 1 3158 182 55 12 chr2 248870414 248870526 -1817328 - L1MB1 LINE L1 -563 5605 5499 1589 202 46 4 chr2 248870526 248871074 -1816780 - L1M3 LINE L1 -575 5593 5018 503 200 146 0 chr2 248871076 248871206 -1816648 + L1 LINE L1 4817 4965 -1181 3458 216 63 16 chr2 248871211 248872140 -1815714 - Charlie1a DNA MER1_type -476 979 7 1440 175 73 32 chr2 248872413 248872467 -1815387 + MER46B DNA MER2_type 5 55 -2676 2489 74 0 0 chr2 248872467 248872765 -1815089 - AluY SINE Alu -13 298 1 1440 175 73 32 chr2 248872765 248873052 -1814802 + MER46B DNA MER2_type 55 235 -1 441 321 57 25 chr2 248873260 248873699 -1814155 - L1ME LINE L1 -459 5780 5328 412 330 77 37 chr2 248873760 248874060 -1813794 - L1ME LINE L1 -953 5262 4951 1119 272 82 34 chr2 248874114 248874534 -1813320 - L1ME LINE L1 -3450 2765 2312 764 138 46 23 chr2 248874534 248874664 -1813190 - FLAM_C SINE Alu 0 133 1 1119 272 82 34 chr2 248874664 248874780 -1813074 - L1ME LINE L1 -3903 2312 2203 492 240 29 6 chr2 248874787 248874958 -1812896 - L1ME LINE L1 -4480 1916 1742 266 320 183 6 chr2 248874966 248875141 -1812713 - MIR SINE MIR -46 216 11 197 284 45 23 chr2 248875842 248875930 -1811924 + MIR SINE MIR 43 132 -76 2218 110 3 7 chr2 248876185 248876494 -1811360 - AluSp SINE Alu -1 312 5 251 272 10 0 chr2 248876997 248877100 -1810754 + CT-rich Low_complexity Low_complexity 2 105 0 267 149 0 46 chr2 248877501 248877588 -1810266 + (TTCCC)n Simple_repeat Simple_repeat 4 86 0 1368 69 0 0 chr2 248877594 248877886 -1809968 + (CCCTG)n Simple_repeat Simple_repeat 1 292 0 5350 107 28 19 chr2 248878113 248878408 -1809446 - L1PB1 LINE L1 0 6867 6576 2119 152 3 0 chr2 248878408 248878704 -1809150 + AluSq SINE Alu 1 297 -16 5350 107 28 19 chr2 248878704 248879291 -1808563 - L1PB1 LINE L1 -291 6576 5977 * 10825 119 152 12 chr2 248879288 248880486 -1807368 - L1PB1 LINE L1 -3975 2888 1858 2281 110 7 0 chr2 248880486 248880787 -1807067 - AluY SINE Alu -8 303 1 10825 119 152 12 chr2 248880787 248881593 -1806261 - L1PB1 LINE L1 -5005 1858 605 1715 196 6 0 chr2 248881667 248881988 -1805866 - L1PB1 LINE L1 -6540 323 1 12477 179 27 69 chr2 248882050 248883623 -1804231 + L1MA6 LINE L1 2029 3666 -2870 1361 133 9 29 chr2 248883623 248883833 -1804021 - AluJo SINE Alu -22 290 85 12477 179 27 69 chr2 248883833 248886731 -1801123 + L1MA6 LINE L1 3666 6530 -6 435 288 99 54 chr2 248886737 248886959 -1800895 + L1ME LINE L1 4602 4833 -1313 272 278 65 0 chr2 248887005 248887113 -1800741 + L1P LINE L1 4882 4996 -1150 2403 67 0 0 chr2 248887334 248887658 -1800196 + AluY SINE Alu 1 324 0 445 256 119 70 chr2 248887704 248888075 -1799779 + L1ME LINE L1 5259 5647 -515 313 332 65 13 chr2 248888173 248888405 -1799449 + L1ME LINE L1 5551 5794 -376 2507 170 101 34 chr2 248888771 248889276 -1798578 - MER52A LTR ERV1 0 1755 1217 3992 37 33 12 chr2 248889291 248889780 -1798074 - L1PA5 LINE L1 -6 6148 5650 298 194 41 61 chr2 248890036 248890134 -1797720 - Charlie8 DNA MER1_type -2216 201 106 489 300 152 5 chr2 248890627 248890837 -1797017 + MIR SINE MIR 21 261 -1 694 223 124 93 chr2 248891367 248891721 -1796133 + MLT1J1 LTR MaLR 66 430 -16 543 297 168 10 chr2 248891815 248892017 -1795837 + MIR SINE MIR 8 241 -21 1236 222 97 36 chr2 248893068 248893460 -1794394 - MLT1C LTR MaLR -1 466 51 227 295 47 65 chr2 248895336 248895658 -1792196 - HAL1 LINE L1 -1334 1173 858 202 313 52 0 chr2 248896399 248896495 -1791359 + MIR SINE MIR 46 146 -62 310 205 24 48 chr2 248899276 248899359 -1788495 - L2 LINE L2 -5 3308 3228 1993 179 14 0 chr2 248899581 248899939 -1787915 - MLT1A1 LTR MaLR -2 363 1 1740 202 62 33 chr2 248900409 248900860 -1786994 + MLT1C LTR MaLR 4 467 0 1151 183 93 26 chr2 248901770 248902092 -1785762 - MSTD LTR MaLR 0 396 1 198 0 0 0 chr2 248902242 248902264 -1785590 + (TG)n Simple_repeat Simple_repeat 1 22 0 344 200 24 94 chr2 248902347 248902432 -1785422 - MER2 DNA MER2_type -262 83 5 210 118 0 0 chr2 248902435 248902469 -1785385 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1396 200 144 45 chr2 248902469 248902500 -1785354 - MLT2B2 LTR ERVL -8 507 480 381 43 0 0 chr2 248902500 248902547 -1785307 + (TAGA)n Simple_repeat Simple_repeat 1 47 0 462 36 0 0 chr2 248902549 248902605 -1785249 + (TG)n Simple_repeat Simple_repeat 2 57 0 1396 200 144 45 chr2 248902605 248903015 -1784839 - MLT2B2 LTR ERVL -35 480 19 324 0 0 0 chr2 248903020 248903056 -1784798 + (CA)n Simple_repeat Simple_repeat 2 37 0 482 314 63 27 chr2 248903571 248903937 -1783917 + L1ME LINE L1 816 1194 -5011 * 585 300 31 28 chr2 248903936 248904226 -1783628 + L1ME LINE L1 1533 1823 -4573 2799 94 6 3 chr2 248904278 248904641 -1783213 + THE1B LTR MaLR 1 364 0 671 257 35 30 chr2 248904704 248904906 -1782948 - LTR16B LTR ERVL -2 462 260 1932 216 49 4 chr2 248905402 248905888 -1781966 - MER114 LTR ERV -125 523 16 237 318 56 8 chr2 248907369 248907495 -1780359 - MER41E LTR ERV1 -59 453 322 296 286 0 0 chr2 248908436 248908506 -1779348 + MIR3 SINE MIR 112 181 -27 312 252 66 80 chr2 248909708 248909859 -1777995 + MIR3 SINE MIR 11 159 -49 1682 185 39 14 chr2 248910164 248910526 -1777328 - L1MB3 LINE L1 -3 6180 5810 5983 55 3 17 chr2 248910597 248911360 -1776494 + SVA Other Other 635 1386 0 1858 202 5 3 chr2 248911368 248911754 -1776100 - L1MB3 LINE L1 -340 5831 5445 505 303 82 42 chr2 248911763 248912411 -1775443 - L1MEc LINE L1 -4937 1459 786 200 317 0 0 chr2 248913242 248913302 -1774552 + L2 LINE L2 3202 3261 -11 626 256 60 58 chr2 248913655 248914002 -1773852 + L1MC5 LINE L1 7448 7795 -166 1385 115 10 5 chr2 248914010 248914234 -1773620 - AluSq SINE Alu 0 310 86 236 288 0 14 chr2 248914279 248914352 -1773502 + L1MC5 LINE L1 7842 7913 -48 232 327 56 9 chr2 248914858 248914965 -1772889 + MIR SINE MIR 36 147 -61 2445 122 98 38 chr2 248915249 248915700 -1772154 + LTR12 LTR ERV1 1 478 -236 2130 92 3 46 chr2 248917482 248917808 -1770046 + AluSq SINE Alu 1 312 -1 219 329 71 32 chr2 248918056 248918211 -1769643 + L2 LINE L2 2928 3088 -184 1707 228 18 40 chr2 248920088 248920457 -1767397 - MER4C LTR ERV1 0 465 106 2084 89 41 7 chr2 248920457 248920748 -1767106 + AluSg1 SINE Alu 1 301 -8 1707 228 18 40 chr2 248920748 248920834 -1767020 - MER4C LTR ERV1 -359 106 20 576 341 99 45 chr2 248922636 248923594 -1764260 - L1ME3 LINE L1 -233 5929 4891 226 164 0 36 chr2 248924098 248924153 -1763701 + (TCTCTG)n Simple_repeat Simple_repeat 4 56 0 1809 151 0 17 chr2 248924678 248924977 -1762877 - AluJo SINE Alu -18 294 1 495 196 0 0 chr2 248925061 248925153 -1762701 - MER5A DNA MER1_type -83 106 15 2242 88 0 0 chr2 248927427 248927724 -1760130 - AluY SINE Alu -14 297 1 224 204 0 0 chr2 248927848 248927892 -1759962 - MIR SINE MIR -116 146 103 2155 104 3 0 chr2 248928358 248928657 -1759197 - AluSg SINE Alu -10 300 1 226 311 0 0 chr2 248930005 248930066 -1757788 + MIR SINE MIR 89 149 -59 638 257 55 25 chr2 248930352 248930554 -1757300 - MER58A DNA MER1_type -16 208 1 227 208 0 0 chr2 248937006 248937054 -1750800 - L2 LINE L2 -1901 1413 1366 2377 117 135 0 chr2 248937281 248937658 -1750196 + MSTA LTR MaLR 1 428 0 2624 152 27 0 chr2 248939176 248939590 -1748264 + MSTB LTR MaLR 1 425 -1 204 234 21 0 chr2 248939607 248939654 -1748200 + GA-rich Low_complexity Low_complexity 1 48 0 1770 241 61 0 chr2 248940194 248940634 -1747220 + MLT1C LTR MaLR 1 467 0 877 250 32 72 chr2 248940635 248940857 -1746997 + L1ME2 LINE L1 5616 5821 -343 2349 91 0 0 chr2 248940857 248941165 -1746689 + AluSq SINE Alu 1 308 -5 877 250 32 72 chr2 248941165 248941290 -1746564 + L1ME2 LINE L1 5821 5949 -215 253 356 141 11 chr2 248941654 248941924 -1745930 - L2 LINE L2 -1 3312 3008 241 340 82 12 chr2 248943592 248943848 -1744006 - MLT1J1 LTR MaLR -113 333 60 200 337 99 0 chr2 248944049 248944150 -1743704 + L3 LINE CR1 1154 1264 -313 1618 99 51 126 chr2 248946721 248947054 -1740800 + THE1B LTR MaLR 1 308 -56 534 150 0 0 chr2 248947055 248947135 -1740719 + AluS SINE Alu 1 80 -232 25 0 0 0 chr2 248947197 248947222 -1740632 + AT_rich Low_complexity Low_complexity 1 25 0 2133 50 64 0 chr2 248949308 248949588 -1738266 + AluY SINE Alu 1 298 -13 212 79 79 0 chr2 248949834 248949872 -1737982 + T-rich Low_complexity Low_complexity 4 44 0 1361 161 32 4 chr2 248950154 248950402 -1737452 + AluSx SINE Alu 50 304 -8 4713 206 92 57 chr2 248950762 248951953 -1735901 + MER52A LTR ERV1 2 1233 -522 3647 20 4 0 chr2 248951953 248952407 -1735447 - L1P LINE L1 -1437 4709 4254 1557 66 9 0 chr2 248952403 248952616 -1735238 + L1P LINE L1 4684 4898 -1248 * 1894 151 24 3 chr2 249152726 249153018 -1534836 + AluSx SINE Alu 1 298 -14 207 0 0 0 chr2 249153197 249153220 -1534634 + (TTGG)n Simple_repeat Simple_repeat 1 23 0 2367 77 3 10 chr2 249153220 249153518 -1534336 - AluSq SINE Alu -17 296 1 1661 163 0 39 chr2 249154065 249154371 -1533483 + AluJo SINE Alu 1 294 -18 225 94 0 0 chr2 249154371 249154403 -1533451 + (TA)n Simple_repeat Simple_repeat 2 33 0 2375 77 0 0 chr2 249154528 249154815 -1533039 + AluSg SINE Alu 1 287 -23 21 57 0 0 chr2 249155405 249155440 -1532414 + AT_rich Low_complexity Low_complexity 1 35 0 333 177 23 76 chr2 249160433 249160966 -1526888 + (CAGCC)n Simple_repeat Simple_repeat 1 505 0 23 78 0 0 chr2 249161221 249161272 -1526582 + GC_rich Low_complexity Low_complexity 1 51 0 180 0 0 0 chr2 249162452 249162472 -1525382 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 215 286 0 0 chr2 249162561 249162624 -1525230 - MIR SINE MIR -62 146 84 2102 120 27 0 chr2 249162902 249163203 -1524651 + AluSx SINE Alu 1 309 -3 192 268 0 0 chr2 249163210 249163251 -1524603 + L2 LINE L2 3216 3256 -16 * 259 163 0 0 chr2 249163218 249163261 -1524593 + MIR SINE MIR 220 262 0 241 284 229 0 chr2 249164779 249164888 -1522966 + MIR SINE MIR 79 212 -50 300 230 143 51 chr2 249165000 249165217 -1522637 + L2 LINE L2 3077 3313 0 3020 228 99 80 chr2 249165233 249165426 -1522428 - MER69B DNA AcHobo -1300 1226 1038 1845 107 0 8 chr2 249165426 249165678 -1522176 + AluY SINE Alu 49 298 -13 3020 228 99 80 chr2 249165678 249166684 -1521170 - MER69B DNA AcHobo -1488 1038 4 2328 112 0 6 chr2 249166871 249167184 -1520670 - AluSx SINE Alu -1 311 1 33 0 0 23 chr2 249167291 249167309 -1520545 + AT_rich Low_complexity Low_complexity 1 18 -25 2287 88 3 0 chr2 249167309 249167594 -1520260 + AluY SINE Alu 1 286 -25 33 0 0 23 chr2 249167594 249167619 -1520235 + AT_rich Low_complexity Low_complexity 18 43 0 315 248 32 40 chr2 249167776 249167901 -1519953 - L1ME4a LINE L1 -7 6114 5991 664 244 46 74 chr2 249168672 249168955 -1518899 + L1MDb LINE L1 786 1060 -5349 1920 225 106 29 chr2 249168958 249169535 -1518319 + MLT1E2 LTR MaLR 1 622 -4 396 148 136 3 chr2 249169543 249169689 -1518165 + L1MDb LINE L1 1065 1230 -5179 424 151 27 0 chr2 249169814 249169887 -1517967 - U3 snRNA snRNA -142 75 1 276 305 99 8 chr2 249169926 249170057 -1517797 + MIR3 SINE MIR 30 172 -36 800 248 110 44 chr2 249170138 249170521 -1517333 - L1MC5 LINE L1 -23 7938 7531 242 229 83 10 chr2 249170896 249170992 -1516862 - L1MC4a LINE L1 -1752 6056 5954 559 202 0 0 chr2 249170994 249171093 -1516761 + FLAM_C SINE Alu 35 133 -10 225 109 43 0 chr2 249171100 249171146 -1516708 - L1MC4 LINE L1 -1339 6703 6656 352 335 119 16 chr2 249171734 249171919 -1515935 - MIR3 SINE MIR -2 206 3 186 346 39 13 chr2 249172783 249172861 -1514993 + MIR SINE MIR 20 99 -163 1076 159 44 0 chr2 249172868 249173050 -1514804 - L1MC1 LINE L1 0 6333 6144 265 0 0 29 chr2 249173527 249173561 -1514293 - AluSg/x SINE Alu -114 186 154 757 188 0 23 chr2 249173625 249173758 -1514096 - FLAM_A SINE Alu -3 130 1 258 208 153 82 chr2 249174258 249174441 -1513413 - L1ME3A LINE L1 0 6170 5975 1687 161 99 0 chr2 249174946 249175268 -1512586 + L1MA4 LINE L1 5894 6247 -53 1081 142 71 110 chr2 249175261 249175543 -1512311 + L1MA8 LINE L1 6020 6290 -1 * 1889 135 7 3 chr2 249176195 249176477 -1511377 + AluSx SINE Alu 6 288 -24 23 54 0 0 chr2 249176753 249176790 -1511064 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr2 249176818 249176850 -1511004 + AT_rich Low_complexity Low_complexity 1 32 0 283 200 46 0 chr2 249177926 249177991 -1509863 - L1MC4 LINE L1 -2 8040 7973 238 306 0 31 chr2 249178629 249178727 -1509127 + MIR SINE MIR 93 187 -75 2000 146 3 3 chr2 249178996 249179298 -1508556 - AluJb SINE Alu -10 302 1 2290 84 0 17 chr2 249179940 249180238 -1507616 - AluY SINE Alu -18 293 1 818 161 0 0 chr2 249180751 249180875 -1506979 - FLAM_A SINE Alu -5 128 5 251 164 55 0 chr2 249180992 249181047 -1506807 - MLT1H LTR MaLR 0 549 492 534 283 45 50 chr2 249181052 249181398 -1506456 - MLT1H LTR MaLR -165 384 4 253 284 172 17 chr2 249181849 249181965 -1505889 + L2 LINE L2 3138 3271 -1 2748 35 0 6 chr2 249182317 249182630 -1505224 - AluYb8 SINE Alu -7 311 1 557 99 0 0 chr2 249182635 249182716 -1505138 + MER2 DNA MER2_type 127 207 -138 1312 162 5 0 chr2 249182852 249183068 -1504786 - L1M4 LINE L1 -539 5645 5429 2134 123 0 40 chr2 249183077 249183402 -1504452 - AluSx SINE Alu 0 312 1 1758 178 10 3 chr2 249183404 249183697 -1504157 - AluJb SINE Alu -17 295 1 1248 164 38 0 chr2 249185456 249185669 -1502185 - MER46A DNA MER2_type 0 236 16 186 118 0 0 chr2 249185674 249185708 -1502146 + (TTATA)n Simple_repeat Simple_repeat 5 38 0 326 236 220 21 chr2 249187065 249187256 -1500598 - L1ME4a LINE L1 -100 6021 5793 1911 145 41 0 chr2 249187280 249187570 -1500284 - AluJb SINE Alu -10 302 1 680 294 17 25 chr2 249187576 249187811 -1500043 - L1ME4a LINE L1 -437 5684 5452 257 295 45 0 chr2 249188397 249188509 -1499345 - L2 LINE L2 -339 2975 2859 312 281 214 0 chr2 249188592 249188873 -1498981 - L2 LINE L2 -668 2646 2306 32 26 0 0 chr2 249190353 249190392 -1497462 + AT_rich Low_complexity Low_complexity 1 39 0 2011 148 7 0 chr2 249190431 249190728 -1497126 + AluJb SINE Alu 5 303 -9 570 185 7 82 chr2 249191029 249191090 -1496764 - LTR45 LTR ERV1 -1 524 460 1078 190 64 85 chr2 249191090 249191385 -1496469 - AluJo SINE Alu -12 290 2 570 185 7 82 chr2 249191385 249191469 -1496385 - LTR45 LTR ERV1 -65 460 390 3572 200 108 43 chr2 249192258 249192499 -1495355 + L1M4 LINE L1 4151 4375 -1771 2543 63 7 0 chr2 249192499 249192802 -1495052 + AluY SINE Alu 1 305 -6 3572 200 108 43 chr2 249192802 249193624 -1494230 + L1M4 LINE L1 4375 5283 -863 1298 152 30 0 chr2 249193625 249193822 -1494032 + AluJo SINE Alu 87 289 -23 1176 177 58 151 chr2 249193831 249193986 -1493868 + MLT1A2 LTR MaLR 1 169 -205 1961 140 7 0 chr2 249193986 249194265 -1493589 + AluSx SINE Alu 1 309 0 187 71 0 0 chr2 249194265 249194293 -1493561 + (CAAA)n Simple_repeat Simple_repeat 1 92 0 1176 177 58 151 chr2 249194293 249194548 -1493306 + MLT1A2 LTR MaLR 169 374 0 24 20 0 60 chr2 249195653 249195703 -1492151 + AT_rich Low_complexity Low_complexity 1 47 0 638 173 19 43 chr2 249196845 249197007 -1490847 - LTR41 LTR ERVL -11 762 605 485 269 94 12 chr2 249197231 249197391 -1490463 - LTR41 LTR ERVL -595 178 6 2030 156 0 10 chr2 249197647 249197948 -1489906 + AluSx SINE Alu 3 300 -12 2213 131 0 0 chr2 249198001 249198307 -1489547 - AluSx SINE Alu -6 306 1 2525 67 0 0 chr2 249199224 249199522 -1488332 + AluY SINE Alu 1 298 -13 205 26 26 51 chr2 249200768 249200807 -1487047 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 21 36 0 0 chr2 249200983 249201011 -1486843 + AT_rich Low_complexity Low_complexity 1 28 0 7727 33 1 0 chr2 249201023 249202333 -1485521 + L1PA3 LINE L1 4843 6153 -2 288 289 24 0 chr2 249202508 249202591 -1485263 + L3 LINE CR1 1064 1148 -429 209 380 93 5 chr2 249202605 249202810 -1485044 + L3 LINE CR1 1333 1555 -22 2549 59 7 7 chr2 249202811 249203118 -1484736 - AluY SINE Alu -4 307 1 251 274 42 21 chr2 249203127 249203138 -1484716 - L1MA10 LINE L1 -3 6331 6321 2471 243 104 30 chr2 249203138 249203557 -1484297 - L1ME3 LINE L1 -2 6160 5774 2395 97 3 0 chr2 249203557 249203856 -1483998 - AluSx SINE Alu -12 300 1 2471 243 104 30 chr2 249203856 249204294 -1483560 - L1ME3 LINE L1 -388 5774 5370 1944 148 3 16 chr2 249204294 249204597 -1483257 - AluSx SINE Alu -13 299 1 2471 243 104 30 chr2 249204597 249204907 -1482947 - L1ME3 LINE L1 -792 5370 4892 544 192 117 0 chr2 249206520 249206640 -1481214 - AluJo SINE Alu -176 136 3 521 275 223 15 chr2 249206702 249206775 -1481079 - L1MC4a LINE L1 -1972 5836 5779 2268 93 3 23 chr2 249206775 249207077 -1480777 - AluSx SINE Alu -16 296 1 521 275 223 15 chr2 249207077 249207403 -1480451 - L1MC4a LINE L1 -2029 5779 5354 1679 167 0 65 chr2 249207652 249207824 -1480030 - AluJb SINE Alu -10 302 159 405 0 0 0 chr2 249207824 249207869 -1479985 + (TA)n Simple_repeat Simple_repeat 1 45 0 1679 167 0 65 chr2 249207869 249208019 -1479835 - AluJb SINE Alu -153 159 1 1711 161 21 11 chr2 249208211 249208497 -1479357 - AluJo SINE Alu -21 291 3 673 161 0 18 chr2 249210231 249210343 -1477511 - AluJb SINE Alu -25 287 178 2157 120 3 0 chr2 249210640 249210932 -1476922 + AluSx SINE Alu 1 293 -19 2338 77 10 26 chr2 249211009 249211319 -1476535 + AluY SINE Alu 1 305 -6 231 204 0 0 chr2 249211355 249211409 -1476445 + (TA)n Simple_repeat Simple_repeat 1 54 0 1569 159 0 59 chr2 249211461 249211751 -1476103 - AluJb SINE Alu -39 273 1 2351 60 0 3 chr2 249211787 249212095 -1475759 - AluY SINE Alu 0 307 1 880 220 0 0 chr2 249212209 249212377 -1475477 - FRAM SINE Alu -7 169 2 2417 85 0 10 chr2 249213075 249213381 -1474473 + AluY SINE Alu 1 303 -8 1172 119 12 0 chr2 249213381 249213549 -1474305 + AluSq SINE Alu 134 303 -10 239 214 90 34 chr2 249213813 249213902 -1473952 - MIR3 SINE MIR -4 204 111 500 0 17 0 chr2 249214006 249214066 -1473788 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 1997 149 3 0 chr2 249214255 249214556 -1473298 + AluJb SINE Alu 1 302 -10 387 267 120 5 chr2 249214797 249214988 -1472866 - L1MC/D LINE L1 -2022 5786 5574 408 295 33 8 chr2 249214999 249215121 -1472733 + L2 LINE L2 3148 3272 0 242 266 160 0 chr2 249215127 249215221 -1472633 - L1MC/D LINE L1 -531 5590 5482 2107 125 7 0 chr2 249215413 249215717 -1472137 - AluSq SINE Alu -7 306 1 349 185 206 0 chr2 249216960 249217052 -1470802 + L1MC4 LINE L1 7625 7735 -307 247 121 0 0 chr2 249217128 249217161 -1470693 - THE1B LTR MaLR 0 355 323 1340 148 14 5 chr2 249217163 249217372 -1470482 - THE1B LTR MaLR -153 211 1 352 200 106 0 chr2 249217372 249217457 -1470397 + L1MC4 LINE L1 7809 7902 -140 255 211 0 0 chr2 249217462 249217514 -1470340 + L1MC4 LINE L1 7990 8041 -1 1892 172 0 3 chr2 249217734 249218019 -1469835 + AluJb SINE Alu 3 286 -26 2132 108 14 3 chr2 249218648 249218943 -1468911 + AluSq SINE Alu 1 298 -15 180 362 11 11 chr2 249219496 249219590 -1468264 - L2 LINE L2 -25 3288 3195 484 188 14 0 chr2 249220977 249221115 -1466739 + (TG)n Simple_repeat Simple_repeat 1 140 0 1638 160 67 0 chr2 249221632 249221900 -1465954 + AluJb SINE Alu 1 286 -26 288 77 0 0 chr2 249221901 249221940 -1465914 + (TGAG)n Simple_repeat Simple_repeat 2 40 0 2197 105 20 3 chr2 249222006 249222310 -1465544 + AluSx SINE Alu 1 309 -3 538 111 0 0 chr2 249222385 249222457 -1465397 - AluSg/x SINE Alu -24 285 214 1226 85 0 0 chr2 249222457 249222610 -1465244 - AluSq SINE Alu -160 153 1 365 259 54 0 chr2 249223528 249223640 -1464214 - MER112 DNA MER1_type -60 200 83 638 236 49 80 chr2 249224432 249224720 -1463134 + HAL1 LINE L1 2 280 -2227 448 263 36 84 chr2 249224798 249224855 -1462999 + L1MC4a LINE L1 5703 5761 -2047 1814 167 0 7 chr2 249224855 249225143 -1462711 + AluJb SINE Alu 1 286 -26 448 263 36 84 chr2 249225143 249225336 -1462518 + L1MC4a LINE L1 5761 5941 -1867 3370 261 73 25 chr2 249225871 249226845 -1461009 + L1PA12 LINE L1 9 1029 -6552 2130 117 7 3 chr2 249226849 249227140 -1460714 + AluSx SINE Alu 1 292 -20 1379 138 104 56 chr2 249227140 249227408 -1460446 + AluSx SINE Alu 20 300 -12 11828 192 19 10 chr2 249227425 249229892 -1457962 + L1PA12 LINE L1 2395 4882 -2702 1837 167 13 7 chr2 249229914 249230214 -1457640 + AluSx SINE Alu 1 302 -10 1353 139 9 5 chr2 249230214 249230437 -1457417 + L1P LINE L1 5036 5259 -887 236 304 118 0 chr2 249230440 249230542 -1457312 + HAL1 LINE L1 1430 1543 -964 682 146 23 140 chr2 249230548 249230719 -1457135 + L1P LINE L1 3433 3583 -2563 464 111 0 0 chr2 249230719 249230791 -1457063 - AluSp/q SINE Alu 0 313 242 325 213 75 0 chr2 249230864 249230944 -1456910 - LTR8 LTR ERV1 -109 582 497 348 220 122 70 chr2 249231248 249231462 -1456392 + HAL1 LINE L1 1994 2218 -289 2354 87 0 0 chr2 249231940 249232227 -1455627 + AluSq SINE Alu 1 287 -26 377 122 98 49 chr2 249232282 249232364 -1455490 - MER2 DNA MER2_type -137 208 123 620 195 51 0 chr2 249232364 249232482 -1455372 + FLAM_C SINE Alu 1 124 -19 642 221 8 16 chr2 249232499 249232626 -1455228 - MER2 DNA MER2_type -219 126 1 2388 77 0 3 chr2 249232754 249233053 -1454801 - AluY SINE Alu -13 298 1 203 100 0 25 chr2 249233121 249233161 -1454693 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1615 127 146 0 chr2 249233216 249233483 -1454371 - AluSx SINE Alu -6 306 1 1455 174 67 45 chr2 249233624 249233980 -1453874 - L1MB7 LINE L1 -16 6168 5805 321 243 66 1 chr2 249234124 249234217 -1453637 - L1MC4 LINE L1 0 8041 7907 1013 251 60 21 chr2 249234257 249234591 -1453263 - L1MC4 LINE L1 -372 7670 7324 716 123 57 0 chr2 249234606 249234712 -1453142 + AluJo SINE Alu 12 123 -189 554 190 10 0 chr2 249234774 249234874 -1452980 + AluJo SINE Alu 121 221 -91 2129 213 173 5 chr2 249234894 249235546 -1452308 - L1MC4 LINE L1 -713 7329 6568 2185 121 17 0 chr2 249235710 249236007 -1451847 + AluSx SINE Alu 1 302 -10 324 234 72 0 chr2 249236135 249236246 -1451608 - L1M4 LINE L1 -3792 2354 2236 1334 146 0 40 chr2 249236246 249236472 -1451382 + AluJo SINE Alu 75 291 -21 2290 64 7 4 chr2 249236780 249237087 -1450767 - AluSp SINE Alu 0 313 21 326 114 0 5 chr2 249237087 249237147 -1450707 - AluSp SINE Alu -258 44 1 355 278 10 0 chr2 249237308 249237405 -1450449 - MER5A DNA MER1_type -54 135 38 438 220 28 9 chr2 249238287 249238396 -1449458 + L1ME LINE L1 5548 5658 -463 1803 160 3 33 chr2 249238731 249239031 -1448823 + AluJb SINE Alu 1 291 -21 2073 101 58 0 chr2 249239557 249239834 -1448020 + AluSx SINE Alu 1 293 -19 29 0 0 0 chr2 249240052 249240081 -1447773 + AT_rich Low_complexity Low_complexity 1 29 0 1781 157 0 41 chr2 249240099 249240393 -1447461 - AluJo SINE Alu -30 282 1 2585 60 0 0 chr2 249240498 249240798 -1447056 - AluY SINE Alu -11 300 1 2538 73 10 0 chr2 249240896 249241196 -1446658 - AluY SINE Alu -8 303 1 239 347 32 62 chr2 249241571 249241698 -1446156 + L1ME4a LINE L1 5559 5688 -433 1787 189 0 3 chr2 249241698 249241989 -1445865 + AluJb SINE Alu 9 298 -14 239 347 32 62 chr2 249241989 249242325 -1445529 + L1ME4a LINE L1 5688 6008 -113 1855 138 0 72 chr2 249242455 249242628 -1445226 - AluSx SINE Alu -16 296 112 237 98 0 0 chr2 249242628 249242669 -1445185 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2374 67 0 3 chr2 249242669 249242952 -1444902 - AluY SINE Alu -29 282 1 1855 138 0 72 chr2 249242952 249243096 -1444758 - AluSx SINE Alu -198 114 1 1415 214 17 17 chr2 249243262 249243552 -1444302 + AluJo SINE Alu 3 292 -20 2543 62 3 3 chr2 249243609 249243916 -1443938 - AluY SINE Alu -4 307 1 1904 154 41 10 chr2 249244012 249244305 -1443549 - AluJb SINE Alu -10 302 1 2311 104 0 0 chr2 249244317 249244616 -1443238 - AluY SINE Alu -12 299 1 1841 142 18 4 chr2 249244666 249244970 -1442884 + AluSq SINE Alu 1 308 0 738 203 72 0 chr2 249245854 249246007 -1441847 + FRAM SINE Alu 1 161 -15 1669 189 0 10 chr2 249249915 249250206 -1437648 - AluJo SINE Alu -11 301 14 298 87 0 0 chr2 249250206 249250252 -1437602 + Alu SINE Alu 257 302 0 815 96 0 15 chr2 249254165 249254300 -1433554 + FLAM_C SINE Alu 1 133 0 2276 97 0 32 chr2 249254704 249255013 -1432841 + AluSg SINE Alu 1 299 -11 1511 159 20 57 chr2 249255077 249255373 -1432481 + AluJo SINE Alu 21 305 -7 2329 79 0 20 chr2 249255373 249255665 -1432189 + AluSg SINE Alu 1 286 -24 1798 151 42 7 chr2 249255665 249255949 -1431905 + AluSx SINE Alu 1 294 -18 1585 138 0 76 chr2 249255985 249256261 -1431593 - AluJb SINE Alu -57 255 1 2165 119 0 0 chr2 249256743 249257029 -1430825 - AluSx SINE Alu -13 299 14 21 0 0 0 chr2 249257381 249257402 -1430452 + AT_rich Low_complexity Low_complexity 1 21 0 563 240 24 0 chr2 249257513 249257638 -1430216 + FLAM_A SINE Alu 5 132 -1 2300 103 0 7 chr2 249257648 249257948 -1429906 + AluSx SINE Alu 3 300 -12 2160 102 18 0 chr2 249258036 249258319 -1429535 + AluSx SINE Alu 1 288 -24 2585 58 0 0 chr2 249258328 249258622 -1429232 + AluY SINE Alu 1 294 -17 2394 103 0 6 chr2 249258759 249259071 -1428783 - AluSg SINE Alu 0 310 1 2241 114 0 3 chr2 249260372 249260669 -1427185 - AluSq SINE Alu -17 296 1 1879 68 0 0 chr2 249260718 249260940 -1426914 - AluY SINE Alu -3 308 87 217 197 28 0 chr2 249262225 249262296 -1425558 + CT-rich Low_complexity Low_complexity 1 73 0 22 35 0 0 chr2 249264803 249264832 -1423022 + GC_rich Low_complexity Low_complexity 1 29 0 1643 187 14 0 chr2 249265276 249265565 -1422289 - AluJo SINE Alu -19 293 1 204 243 175 28 chr2 249266100 249266277 -1421577 + L2 LINE L2 2375 2577 -737 2331 104 7 13 chr2 249267671 249267979 -1419875 - AluSx SINE Alu -6 306 1 227 226 0 85 chr2 249271603 249271709 -1416145 + C-rich Low_complexity Low_complexity 2 98 0 2154 134 0 3 chr2 249271960 249272259 -1415595 + AluJo SINE Alu 1 298 -14 1832 153 27 14 chr2 249272351 249272646 -1415208 + AluJb SINE Alu 1 299 -13 2284 93 6 26 chr2 249274053 249274364 -1413490 - AluSq SINE Alu 0 313 9 2668 48 0 6 chr2 249276471 249276782 -1411072 - AluY SINE Alu -2 309 1 2751 25 0 37 chr2 249279012 249279335 -1408519 + AluY SINE Alu 1 311 0 2062 135 0 10 chr2 249279496 249279836 -1408018 + AluSx SINE Alu 1 312 0 1893 128 0 122 chr2 249280324 249280708 -1407146 + MER1B DNA MER1_type 1 337 0 298 124 0 0 chr2 249281017 249281076 -1406778 - L1MB7 LINE L1 -1 6165 6107 1724 153 7 51 chr2 249281078 249281373 -1406481 + AluJb SINE Alu 1 282 -30 2296 88 0 3 chr2 249281393 249281707 -1406147 + AluSp SINE Alu 1 313 0 282 56 0 0 chr2 249281709 249281745 -1406109 + (CATA)n Simple_repeat Simple_repeat 3 38 0 3067 145 65 124 chr2 249281746 249282111 -1405743 - L1MB7 LINE L1 -58 6126 5741 2488 92 0 0 chr2 249282111 249282415 -1405439 - AluSc SINE Alu -5 304 1 3067 145 65 124 chr2 249282415 249283140 -1404714 - L1MB7 LINE L1 -443 5741 5080 1089 160 0 0 chr2 249283140 249283296 -1404558 + FRAM SINE Alu 1 155 -21 21 36 0 0 chr2 249285520 249285548 -1402306 + AT_rich Low_complexity Low_complexity 1 28 0 1010 201 93 31 chr2 249285700 249285924 -1401930 - L1MB7 LINE L1 -1053 5093 4846 1703 156 30 40 chr2 249285924 249286226 -1401628 + AluJb SINE Alu 1 299 -13 1010 201 93 31 chr2 249286226 249286290 -1401564 - L1MB7 LINE L1 -1300 4846 4787 449 202 83 141 chr2 249287026 249287361 -1400493 - LTR50 LTR ERVL -2 771 471 198 182 0 23 chr2 249288203 249288247 -1399607 + L2 LINE L2 3226 3268 -4 411 264 0 84 chr2 249290125 249290484 -1397370 + CT-rich Low_complexity Low_complexity 1 328 0 285 197 0 164 chr2 249290541 249290754 -1397100 + CT-rich Low_complexity Low_complexity 1 178 0 917 204 9 80 chr2 249291151 249291377 -1396477 + AluJo SINE Alu 1 210 -102 417 199 20 0 chr2 249291477 249291623 -1396231 + (CA)n Simple_repeat Simple_repeat 2 150 0 316 148 46 0 chr2 249291663 249291771 -1396083 + (CA)n Simple_repeat Simple_repeat 2 114 0 1134 275 36 12 chr2 249291903 249292314 -1395540 + MLT1C LTR MaLR 12 432 -35 203 245 0 19 chr2 249292329 249292382 -1395472 + GA-rich Low_complexity Low_complexity 1 52 0 1320 173 14 0 chr2 249292630 249292838 -1395016 + AluSg/x SINE Alu 92 302 -10 1280 139 9 5 chr2 249292838 249293061 -1394793 + L1P LINE L1 5036 5259 -887 243 304 118 0 chr2 249293064 249293166 -1394688 + HAL1 LINE L1 1430 1543 -964 491 186 23 139 chr2 249293172 249293344 -1394510 + L1P LINE L1 3433 3584 -2562 260 177 0 0 chr2 249293353 249293415 -1394439 - AluSp/q SINE Alu 0 303 242 946 131 71 6 chr2 249293757 249293940 -1393914 + L1MB2 LINE L1 5973 6167 -4 1999 133 44 0 chr2 249293947 249294240 -1393614 + AluSx SINE Alu 1 306 -6 1038 151 0 6 chr2 249294240 249294399 -1393455 + AluSg/x SINE Alu 135 292 -18 197 65 32 0 chr2 249294407 249294438 -1393416 + (TATAA)n Simple_repeat Simple_repeat 1 32 0 1480 166 69 0 chr2 249294442 249294732 -1393122 + L1MB4 LINE L1 5828 6137 -43 443 98 0 3 chr2 249294790 249294995 -1392859 + AluSg SINE Alu 17 288 -22 254 128 0 0 chr2 249294995 249295042 -1392812 + L1MB4 LINE L1 6131 6177 -3 1044 104 0 7 chr2 249295121 249295256 -1392598 + AluSq/x SINE Alu 3 136 -176 2320 68 55 3 chr2 249295364 249295656 -1392198 + AluY SINE Alu 3 309 -2 306 165 353 0 chr2 249296574 249296659 -1391195 - FLAM_A SINE Alu -7 126 12 610 257 213 7 chr2 249297401 249297697 -1390157 - L1M4 LINE L1 -913 5233 4877 216 0 0 0 chr2 249297735 249297759 -1390095 + (TG)n Simple_repeat Simple_repeat 2 25 0 1141 245 102 3 chr2 249297814 249298185 -1389669 + L1M4 LINE L1 2610 3017 -3129 387 163 228 0 chr2 249299940 249300032 -1387822 + L1M4 LINE L1 4922 5034 -1112 996 174 16 25 chr2 249300036 249300278 -1387576 + L1M4 LINE L1 5089 5328 -818 1730 191 10 3 chr2 249300279 249300582 -1387272 + AluJb SINE Alu 1 305 -7 265 194 104 0 chr2 249300597 249300664 -1387190 + MER53 DNA DNA 111 184 -5 1371 224 59 39 chr2 249300672 249300901 -1386953 + L1MEc LINE L1 621 844 -5552 2343 85 0 0 chr2 249300901 249301184 -1386670 + AluSc SINE Alu 1 283 -26 1371 224 59 39 chr2 249301184 249301444 -1386410 + L1MEc LINE L1 844 1120 -5276 719 154 0 0 chr2 249301446 249301563 -1386291 + FLAM_C SINE Alu 12 128 -15 2376 87 0 0 chr2 249301986 249302273 -1385581 + AluSq SINE Alu 1 287 -26 346 122 98 49 chr2 249302328 249302410 -1385444 - MER2 DNA MER2_type -137 208 123 598 195 51 0 chr2 249302410 249302528 -1385326 + FLAM_C SINE Alu 1 124 -19 458 280 16 16 chr2 249302545 249302670 -1385184 - MER2 DNA MER2_type -219 126 2 2338 51 0 7 chr2 249302945 249303220 -1384634 + AluY SINE Alu 35 307 -4 471 248 127 0 chr2 249303226 249303383 -1384471 + HAL1 LINE L1 1474 1650 -857 868 253 194 80 chr2 249303415 249303718 -1384136 - MLT1G1 LTR MaLR 0 595 328 1379 211 58 31 chr2 249303718 249304078 -1383776 - MLT1A2 LTR MaLR -4 370 1 868 253 194 80 chr2 249304078 249304300 -1383554 - MLT1G1 LTR MaLR -267 328 10 2074 138 7 3 chr2 249304714 249305012 -1382842 + AluSx SINE Alu 1 299 -13 1191 138 0 0 chr2 249305012 249305179 -1382675 + AluSg/x SINE Alu 134 300 -12 1690 123 0 0 chr2 249305312 249305532 -1382322 - AluSx SINE Alu -91 221 2 484 125 0 0 chr2 249306613 249306685 -1381169 + FRAM/FAM SINE Alu 1 71 -105 186 191 131 0 chr2 249307472 249307556 -1380298 + MIR3 SINE MIR 62 156 -52 313 234 0 58 chr2 249308348 249308485 -1379369 + (CGGGG)n Simple_repeat Simple_repeat 1 129 0 1747 175 46 1 chr2 249308590 249309131 -1378723 - L1M3 LINE L1 -600 5583 5021 1367 247 77 15 chr2 249309136 249309614 -1378240 - L1M4 LINE L1 -1016 5130 4623 2264 107 33 38 chr2 249309698 249310064 -1377790 - THE1B LTR MaLR 0 364 1 279 318 23 16 chr2 249310078 249310207 -1377647 - L1ME LINE L1 -5935 135 6 2453 45 0 7 chr2 249310271 249310588 -1377266 - AluY SINE Alu 0 315 1 963 81 0 8 chr2 249310783 249310907 -1376947 + AluSc SINE Alu 128 250 -59 1998 110 0 4 chr2 249310907 249311171 -1376683 + AluSc SINE Alu 45 307 -2 389 167 0 14 chr2 249311181 249311253 -1376601 - L1M3 LINE L1 -484 5687 5617 1750 187 17 31 chr2 249311257 249311616 -1376238 + MSTD LTR MaLR 2 355 -41 4566 52 18 6 chr2 249311616 249312486 -1375368 - MER11A LTR ERVK 0 1266 245 2362 101 0 3 chr2 249312832 249313129 -1374725 - AluSx SINE Alu -15 297 2 276 333 42 0 chr2 249313321 249313441 -1374413 - MIR SINE MIR -64 144 20 364 274 82 14 chr2 249313693 249313756 -1374098 - MIR SINE MIR 0 262 205 2363 86 3 3 chr2 249313756 249314059 -1373795 + AluSc SINE Alu 1 303 -6 364 274 82 14 chr2 249314059 249314141 -1373713 - MIR SINE MIR -57 205 107 1917 235 87 5 chr2 249314141 249314749 -1373105 - L1M4 LINE L1 -2444 3702 3045 1147 131 0 6 chr2 249314750 249314918 -1372936 - AluSg/x SINE Alu 0 310 144 348 327 65 25 chr2 249315077 249315276 -1372578 - HAL1 LINE L1 -1554 953 747 314 207 69 23 chr2 249315899 249315986 -1371868 + MIR SINE MIR 23 113 -95 322 298 83 72 chr2 249316218 249316271 -1371583 + HAL1 LINE L1 1032 1083 -1424 1649 188 29 26 chr2 249316271 249316579 -1371275 + AluJb SINE Alu 1 309 -3 322 298 83 72 chr2 249316579 249316617 -1371237 + HAL1 LINE L1 1083 1119 -1388 2332 92 0 29 chr2 249316617 249316932 -1370922 + AluSg SINE Alu 1 306 -4 322 298 83 72 chr2 249316932 249317020 -1370834 + HAL1 LINE L1 1119 1214 -1293 2111 146 0 0 chr2 249317132 249317433 -1370421 - AluSx SINE Alu -11 301 1 301 158 35 0 chr2 249317545 249317602 -1370252 - L2 LINE L2 -3 3269 3211 1093 184 15 10 chr2 249318166 249318372 -1369482 + AluJo SINE Alu 2 208 -104 1626 214 3 3 chr2 249318393 249318701 -1369153 + AluJo SINE Alu 1 308 -4 676 241 116 14 chr2 249318823 249318967 -1368887 - L1MA9 LINE L1 0 6312 6184 264 59 0 0 chr2 249318967 249319001 -1368853 + (TG)n Simple_repeat Simple_repeat 1 34 0 676 241 116 14 chr2 249319001 249319331 -1368523 - L1MA9 LINE L1 -128 6184 5777 1032 207 24 5 chr2 249319331 249319539 -1368315 - AluJo SINE Alu -7 305 94 235 175 0 0 chr2 249319665 249319705 -1368149 - Alu SINE Alu -261 40 1 385 170 71 9 chr2 249319705 249319817 -1368037 - L1 LINE L1 -1478 4668 4550 2397 72 0 3 chr2 249319894 249320201 -1367653 + AluY SINE Alu 1 306 -5 392 259 151 6 chr2 249320708 249320874 -1366980 - MIR SINE MIR -45 217 28 2051 129 10 0 chr2 249320984 249321287 -1366567 + AluSx SINE Alu 1 306 -6 22 0 0 0 chr2 249324288 249324310 -1363544 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 249324480 249324501 -1363353 + GC_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr2 249324572 249324605 -1363249 + GC_rich Low_complexity Low_complexity 1 33 0 301 278 82 0 chr2 249325148 249325245 -1362609 - MLT1K LTR MaLR -30 558 454 1342 174 168 9 chr2 249326229 249326563 -1361291 + MSTB LTR MaLR 1 387 -39 2255 96 0 3 chr2 249326563 249326866 -1360988 + AluSq SINE Alu 1 302 -11 2436 66 0 0 chr2 249329764 249330069 -1357785 - AluY SINE Alu -6 305 1 277 236 7 57 chr2 249330647 249330787 -1357067 + G-rich Low_complexity Low_complexity 4 136 0 22 35 0 0 chr2 249330808 249330837 -1357017 + GC_rich Low_complexity Low_complexity 1 29 0 2188 120 3 0 chr2 249332282 249332591 -1355263 - AluSq SINE Alu -3 310 1 1521 117 4 47 chr2 249333907 249334200 -1353654 + AluSx SINE Alu 56 312 0 2042 125 0 122 chr2 249334688 249335072 -1352782 + MER1B DNA MER1_type 1 337 0 306 115 0 0 chr2 249335388 249335440 -1352414 - L1MB7 LINE L1 -19 6165 6114 1646 153 7 51 chr2 249335442 249335737 -1352117 + AluJb SINE Alu 1 282 -30 1315 87 0 6 chr2 249335757 249335930 -1351924 + AluSp SINE Alu 1 172 -141 601 14 14 0 chr2 249336033 249336104 -1351750 - AluY SINE Alu -226 84 13 1366 116 9 0 chr2 249336104 249336320 -1351534 - MER47A DNA MER2_type -114 252 35 2167 63 53 13 chr2 249336469 249336768 -1351086 - AluY SINE Alu 0 311 1 568 306 98 44 chr2 249336815 249337181 -1350673 - L1M4 LINE L1 -1230 4916 4531 409 344 42 21 chr2 249337315 249337699 -1350155 - L1M4 LINE L1 -2095 4051 3660 2192 112 0 7 chr2 249339799 249340102 -1347752 - AluSx SINE Alu -11 301 1 1411 107 5 0 chr2 249341371 249341558 -1346296 + AluSg/x SINE Alu 86 273 -39 1885 147 0 13 chr2 249341882 249342194 -1345660 - AluSp SINE Alu -5 308 1 323 286 121 6 chr2 249342198 249342380 -1345474 - L1MC2 LINE L1 -17 6327 6125 2093 110 14 0 chr2 249342447 249342764 -1345090 - AluSq SINE Alu 0 313 1 1285 186 57 4 chr2 249349286 249349630 -1338224 - MLT2B2 LTR ERVL -108 407 3 481 254 18 0 chr2 249349636 249349746 -1338108 - MER81 DNA DNA -1 113 2 664 327 121 8 chr2 249349747 249350135 -1337719 + L1MD2 LINE L1 5501 5932 -427 751 174 0 0 chr2 249350147 249350268 -1337586 - FLAM_A SINE Alu -12 121 1 392 327 81 65 chr2 249350268 249350503 -1337351 + L1ME1 LINE L1 5907 6148 -18 2003 139 13 0 chr2 249350503 249350805 -1337049 - AluSx SINE Alu -6 306 1 392 327 81 65 chr2 249350805 249350817 -1337037 + L1ME1 LINE L1 6148 6158 -8 245 186 0 17 chr2 249350840 249350899 -1336955 - L1MC5 LINE L1 -306 7655 7598 2100 83 19 35 chr2 249352357 249352670 -1335184 - AluY SINE Alu -3 308 1 749 130 28 107 chr2 249354120 249354275 -1333579 - MER63 DNA MER1_type -4 1056 921 1501 185 16 30 chr2 249354275 249354578 -1333276 + AluJb SINE Alu 5 303 -9 749 130 28 107 chr2 249354578 249354638 -1333216 - MER63 DNA MER1_type -139 921 858 2247 195 79 9 chr2 249354640 249355184 -1332670 + MER54A LTR ERVL 1 582 -319 2075 145 23 33 chr2 249355185 249355506 -1332348 + MER75 DNA T2_type 1 319 -195 2258 98 0 0 chr2 249355506 249355801 -1332053 - AluSx SINE Alu -17 295 1 2075 145 23 33 chr2 249355801 249355871 -1331983 + MER75 DNA T2_type 319 388 -126 1011 181 0 0 chr2 249355871 249356037 -1331817 - AluJb SINE Alu -10 302 137 824 95 7 0 chr2 249356037 249356174 -1331680 + MER75 DNA T2_type 377 514 0 1790 194 71 0 chr2 249356257 249356638 -1331216 + MER47B DNA MER2_type 11 418 0 1119 105 58 0 chr2 249356656 249356846 -1331008 + L1MA5A LINE L1 6097 6297 0 2102 127 3 0 chr2 249356855 249357155 -1330699 + AluSx SINE Alu 2 302 -10 227 160 0 20 chr2 249357155 249357205 -1330649 + MER54B LTR ERVL 744 792 -1 7423 117 72 38 chr2 249558225 249559556 -1128298 + THE1C-int LTR MaLR 205 1580 0 2268 120 46 25 chr2 249559556 249559923 -1127931 + THE1C LTR MaLR 1 375 0 256 263 38 0 chr2 249562513 249562593 -1125261 + MER117 DNA MER1_type 34 116 -81 268 400 52 9 chr2 249563232 249563462 -1124392 + L3 LINE CR1 968 1207 -370 440 294 131 70 chr2 249563636 249564043 -1123811 - HAL1 LINE L1 -1018 1489 1045 2049 140 0 0 chr2 249564043 249564351 -1123503 - AluSq SINE Alu -3 310 3 440 294 131 70 chr2 249564351 249564440 -1123414 - HAL1 LINE L1 -1462 1045 963 1128 91 0 33 chr2 249565058 249565896 -1121958 + (TTCC)n Simple_repeat Simple_repeat 1 988 0 233 157 98 0 chr2 249568610 249568661 -1119193 + MIR SINE MIR 88 143 -119 195 231 66 22 chr2 249568951 249569042 -1118812 + L2 LINE L2 2996 3090 -182 343 160 27 0 chr2 249569488 249569563 -1118291 + CT-rich Low_complexity Low_complexity 4 80 0 381 330 55 31 chr2 249570803 249571130 -1116724 - MER90 LTR ERV1 -6 569 235 395 242 40 8 chr2 249573393 249573517 -1114337 - LTR45 LTR ERV1 -8 517 390 1180 217 36 148 chr2 249575811 249576419 -1111435 + MER77 LTR ERV1 53 592 -13 1214 268 3 13 chr2 249576521 249576835 -1111019 + MER77-int LTR ERV1 13 323 -3868 925 114 24 0 chr2 249577050 249577216 -1110638 - Tigger2 DNA MER2_type -88 2630 2461 820 63 78 14 chr2 249577284 249577426 -1110428 - Tigger2 DNA MER2_type -1974 744 594 952 149 6 12 chr2 249577772 249577940 -1109914 + AluJo SINE Alu 1 167 -145 1642 134 0 0 chr2 249577940 249578186 -1109668 + AluSq SINE Alu 68 313 0 980 275 57 18 chr2 249578213 249578544 -1109310 + MER77-int LTR ERV1 1294 1637 -2554 678 128 8 0 chr2 249578574 249578691 -1109163 - LTR47A LTR ERVL 0 452 335 227 176 73 0 chr2 249579007 249579075 -1108779 - MER115 DNA AcHobo -146 547 475 710 222 23 0 chr2 249580523 249580699 -1107155 - MER41E LTR ERV1 -6 506 327 795 230 29 4 chr2 249580739 249580978 -1106876 - MER41E LTR ERV1 -259 253 9 1640 296 101 17 chr2 249581487 249582369 -1105485 + MER45R DNA AcHobo 346 1301 -280 225 333 8 17 chr2 249583932 249584052 -1103802 + (CCA)n Simple_repeat Simple_repeat 2 120 0 367 333 93 10 chr2 249586048 249586339 -1101515 - L1MC/D LINE L1 -747 5991 5677 * 3561 266 37 46 chr2 249586309 249586993 -1100861 - L1M4 LINE L1 -774 5766 5077 2551 229 99 19 chr2 249586993 249587318 -1100536 - MER72 LTR ERV1 0 722 424 2348 91 3 0 chr2 249587318 249587627 -1100227 + AluSq SINE Alu 1 310 -3 2551 229 99 19 chr2 249587627 249587970 -1099884 - MER72 LTR ERV1 -298 424 1 3561 266 37 46 chr2 249587970 249588707 -1099147 - L1M4 LINE L1 -1463 5077 4358 1152 302 37 9 chr2 249588734 249589165 -1098689 - L1MCb LINE L1 -5596 449 7 987 262 59 108 chr2 249589223 249589821 -1098033 - L1MC5 LINE L1 -437 7524 6988 2398 114 19 27 chr2 249589821 249590188 -1097666 - THE1B LTR MaLR 0 364 1 987 262 59 108 chr2 249590188 249590602 -1097252 - L1MC5 LINE L1 -973 6988 6555 311 304 34 6 chr2 249590610 249590798 -1097056 - L1MC/D LINE L1 -1882 4658 4469 289 275 67 8 chr2 249590802 249590922 -1096932 - L1MC/D LINE L1 -2229 4311 4185 1627 276 75 32 chr2 249591016 249591553 -1096301 - MER68 LTR ERV1 0 562 3 2317 106 0 0 chr2 249591789 249592101 -1095753 + AluSx SINE Alu 1 312 0 201 39 0 0 chr2 249592101 249592127 -1095727 + (TA)n Simple_repeat Simple_repeat 2 27 0 234 0 0 0 chr2 249592127 249592153 -1095701 + (T)n Simple_repeat Simple_repeat 1 26 0 2174 111 0 0 chr2 249592459 249592747 -1095107 - AluSx SINE Alu -13 299 12 3913 255 89 79 chr2 249593089 249593237 -1094617 + MER21-int LTR ERV1 1648 1793 -2398 2367 117 39 25 chr2 249593237 249593596 -1094258 - THE1B LTR MaLR 0 364 1 3913 255 89 79 chr2 249593596 249594285 -1093569 + MER21-int LTR ERV1 1793 2473 -1718 1788 135 0 8 chr2 249594285 249594584 -1093270 - AluJo SINE Alu 0 313 17 3913 255 89 79 chr2 249594584 249595511 -1092343 + MER21-int LTR ERV1 2473 3432 -759 659 231 42 5 chr2 249595542 249595837 -1092017 - L1MDa LINE L1 -3759 2781 2479 2829 129 19 71 chr2 249595862 249596426 -1091428 - L1MC1 LINE L1 -1 6332 5798 3542 97 8 16 chr2 249596435 249596949 -1090905 - L1PB1 LINE L1 -1 6150 5641 1463 68 5 0 chr2 249596949 249597155 -1090699 + L1PB1 LINE L1 5447 5653 -498 3816 197 11 15 chr2 249597209 249598325 -1089529 - L1MC1 LINE L1 -561 5772 4653 1724 114 80 4 chr2 249598325 249598628 -1089226 - AluSx SINE Alu 0 323 1 3816 197 11 15 chr2 249598628 249598966 -1088888 - L1MC1 LINE L1 -1680 4653 4322 2209 85 34 3 chr2 249598966 249599261 -1088593 - AluY SINE Alu -7 304 1 3816 197 11 15 chr2 249599261 249599299 -1088555 - L1MC1 LINE L1 -2011 4322 4285 1945 118 32 100 chr2 249599308 249599749 -1088105 - MSTA LTR MaLR 0 428 18 1539 221 32 39 chr2 249599758 249600318 -1087536 - L1MC1 LINE L1 -1871 4275 3720 242 119 0 34 chr2 249600289 249600348 -1087506 - L1MC3 LINE L1 -18 7767 7711 * 372 157 57 0 chr2 249600348 249600418 -1087436 - MER54B LTR ERVL -524 269 196 1098 149 30 96 chr2 249600428 249600729 -1087125 - L1MC3 LINE L1 -77 7708 7428 265 152 0 0 chr2 249600778 249600824 -1087030 - MER54B LTR ERVL -116 677 632 1962 186 57 24 chr2 249600865 249601311 -1086543 - MER54B LTR ERVL -142 651 102 2197 114 3 0 chr2 249601311 249601610 -1086244 + AluSp SINE Alu 1 300 -13 1962 186 57 24 chr2 249601610 249601716 -1086138 - MER54B LTR ERVL -691 102 1 8904 192 44 36 chr2 249601716 249602430 -1085424 - L1MC3 LINE L1 -352 7433 6726 2029 147 0 3 chr2 249602430 249602730 -1085124 + AluSx SINE Alu 1 299 -13 8904 192 44 36 chr2 249602730 249604538 -1083316 - L1MC3 LINE L1 -1059 6726 4892 3894 254 50 22 chr2 249604550 249606118 -1081736 - L1MC3 LINE L1 -1946 4200 2589 818 243 11 34 chr2 249606144 249606669 -1081185 + L1MEc LINE L1 2130 2622 -3804 2975 230 22 52 chr2 249606671 249607463 -1080391 + L1MEc LINE L1 2946 3693 -2733 2109 73 0 7 chr2 249607463 249607735 -1080119 - AluY SINE Alu -16 295 26 2975 230 22 52 chr2 249607735 249608113 -1079741 + L1MEc LINE L1 3693 4081 -2345 1103 199 73 23 chr2 249608114 249608416 -1079438 + MLT1C LTR MaLR 6 322 -145 * 3723 121 6 36 chr2 249608410 249609054 -1078800 + MER4D LTR ERV1 248 872 0 802 200 67 19 chr2 249609090 249609417 -1078437 - LTR34 LTR ERV1 -5 694 213 2719 197 15 57 chr2 249609601 249610251 -1077603 + LTR5 LTR ERVK 1 623 -346 1618 289 97 29 chr2 249611590 249611727 -1076127 - MER45R DNA AcHobo -280 1301 1175 2180 82 6 35 chr2 249611727 249612046 -1075808 - AluSq SINE Alu -2 311 2 1618 289 97 29 chr2 249612046 249612803 -1075051 - MER45R DNA AcHobo -406 1175 346 718 227 38 8 chr2 249613556 249613794 -1074060 + MER41E LTR ERV1 9 253 -259 710 222 23 0 chr2 249613834 249614010 -1073844 + MER41E LTR ERV1 327 506 -6 258 289 113 6 chr2 249615457 249615616 -1072238 + MER115 DNA AcHobo 475 650 -43 389 314 106 18 chr2 249616118 249616344 -1071510 + HAL1 LINE L1 223 468 -2039 594 301 79 19 chr2 249616520 249616886 -1070968 + MLT1C LTR MaLR 53 440 -27 442 298 41 12 chr2 249616924 249617166 -1070688 + HAL1 LINE L1 1547 1795 -712 874 115 6 24 chr2 249619045 249619368 -1068486 + (GA)n Simple_repeat Simple_repeat 1 318 0 510 274 46 2 chr2 249623766 249623988 -1063866 - L1ME2 LINE L1 -296 5866 5636 879 156 21 11 chr2 249624004 249624190 -1063664 - MER49 LTR ERV1 0 923 736 856 248 160 4 chr2 249625766 249626133 -1061721 - MLT2B1 LTR ERVL 0 520 100 919 273 92 16 chr2 249626196 249626638 -1061216 + L1ME2 LINE L1 5128 5644 -520 3795 214 34 21 chr2 249626638 249627545 -1060309 + MER49 LTR ERV1 5 923 0 919 273 92 16 chr2 249627545 249627744 -1060110 + L1ME2 LINE L1 5644 5826 -338 665 144 23 0 chr2 249632187 249632361 -1055493 + CT-rich Low_complexity Low_complexity 1 178 0 265 281 52 0 chr2 249635115 249635211 -1052643 - MIR SINE MIR -21 241 141 274 206 0 98 chr2 249635328 249635420 -1052434 - L1MD2 LINE L1 -14 6345 6263 271 296 49 49 chr2 249637100 249637262 -1050592 - MIR3 SINE MIR -42 166 5 191 350 38 0 chr2 249641890 249641970 -1045884 + MIR3 SINE MIR 112 194 -14 306 267 25 81 chr2 249644688 249644849 -1043005 + L3 LINE CR1 1424 1575 -2 25 0 0 0 chr2 249647425 249647450 -1040404 + GC_rich Low_complexity Low_complexity 1 25 0 270 320 0 10 chr2 249648696 249648796 -1039058 + MLT1J LTR MaLR 239 337 -174 2189 93 17 0 chr2 249648829 249649119 -1038735 + AluSq SINE Alu 5 299 -14 474 304 0 18 chr2 249649710 249649881 -1037973 + GA-rich Low_complexity Low_complexity 2 169 0 518 227 67 13 chr2 249651319 249651469 -1036385 + MIR SINE MIR 69 226 -36 271 176 0 27 chr2 249654379 249654453 -1033401 + G-rich Low_complexity Low_complexity 4 75 0 431 217 11 29 chr2 249654483 249654658 -1033196 + GA-rich Low_complexity Low_complexity 3 174 0 214 278 0 28 chr2 249654750 249654894 -1032960 + GA-rich Low_complexity Low_complexity 3 142 0 302 225 0 45 chr2 249654909 249654998 -1032856 + G-rich Low_complexity Low_complexity 5 89 0 376 253 5 68 chr2 249655078 249655268 -1032586 + GA-rich Low_complexity Low_complexity 3 180 0 302 374 12 6 chr2 249655194 249655365 -1032489 + G-rich Low_complexity Low_complexity 4 175 0 * 210 220 28 23 chr2 249655366 249655543 -1032311 + GA-rich Low_complexity Low_complexity 3 180 0 329 159 0 14 chr2 249660046 249660115 -1027739 + GA-rich Low_complexity Low_complexity 4 71 0 1834 198 69 33 chr2 249661889 249662339 -1025515 + MLT1C LTR MaLR 2 467 0 461 250 33 33 chr2 249662365 249662517 -1025337 - MIR3 SINE MIR -46 162 11 231 328 124 0 chr2 249663117 249663294 -1024560 + L2 LINE L2 2600 2798 -516 289 364 155 8 chr2 249663397 249663661 -1024193 + L2 LINE L2 3009 3311 -2 1847 219 8 28 chr2 249666902 249667295 -1020559 + MLT1B LTR MaLR 2 386 -4 2120 90 10 22 chr2 249671332 249671644 -1016210 + AluSx SINE Alu 1 308 -4 207 69 0 0 chr2 249671939 249671968 -1015886 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 254 277 62 36 chr2 249672124 249672236 -1015618 - MIR SINE MIR -36 226 112 191 271 82 12 chr2 249676740 249676825 -1011029 - MIR SINE MIR -95 167 77 405 39 0 0 chr2 249680362 249680413 -1007441 + (TCC)n Simple_repeat Simple_repeat 1 51 0 270 143 0 0 chr2 249682097 249682146 -1005708 + (TG)n Simple_repeat Simple_repeat 1 49 0 1428 218 59 24 chr2 249682151 249682606 -1005248 + MER74B LTR ERVL 59 529 -93 1679 179 3 32 chr2 249682677 249682989 -1004865 + AluJo SINE Alu 1 303 -9 253 226 167 48 chr2 249683328 249683496 -1004358 + ORSL DNA AcHobo 14 201 -74 246 333 0 0 chr2 249685385 249685457 -1002397 + (TG)n Simple_repeat Simple_repeat 1 72 0 840 188 36 133 chr2 249687601 249687985 -999869 + MLT2C1 LTR ERVL 5 351 -46 196 273 81 10 chr2 249688925 249689024 -998830 - MIR SINE MIR -62 146 41 285 89 0 0 chr2 249689656 249689701 -998153 + (TC)n Simple_repeat Simple_repeat 2 46 0 333 0 0 0 chr2 249689701 249689738 -998116 + (CA)n Simple_repeat Simple_repeat 1 37 0 279 125 21 0 chr2 249697283 249697331 -990523 - MIR SINE MIR -59 149 101 213 200 114 29 chr2 249698240 249698310 -989544 + MIR3 SINE MIR 97 172 -36 215 215 46 15 chr2 249698459 249698524 -989330 - MIR SINE MIR -116 146 80 2422 71 0 6 chr2 249699984 249700295 -987559 - AluSc SINE Alu 0 309 1 297 0 0 0 chr2 249701463 249701496 -986358 + (CA)n Simple_repeat Simple_repeat 2 34 0 280 261 0 34 chr2 249701976 249702095 -985759 + (CTCA)n Simple_repeat Simple_repeat 4 118 0 480 259 8 25 chr2 249702112 249702475 -985379 + (CTCA)n Simple_repeat Simple_repeat 1 356 0 421 251 0 44 chr2 249702502 249702685 -985169 + (CTCA)n Simple_repeat Simple_repeat 4 178 0 432 136 0 0 chr2 249703722 249703810 -984044 + (CA)n Simple_repeat Simple_repeat 1 88 0 190 161 0 0 chr2 249705119 249705150 -982704 - MIR SINE MIR -114 148 118 345 236 73 8 chr2 249710674 249710797 -977057 - L2 LINE L2 -222 3050 2920 1846 202 123 5 chr2 249712823 249713239 -974615 + MLT1C LTR MaLR 2 466 -1 217 293 52 40 chr2 249713667 249713841 -974013 + (CACCC)n Simple_repeat Simple_repeat 5 180 0 785 267 69 21 chr2 249714959 249715380 -972474 + MLT1A2 LTR MaLR 1 458 -9 308 265 29 48 chr2 249715584 249715737 -972117 - MIR3 SINE MIR -33 175 24 473 212 113 0 chr2 249718715 249718866 -968988 + LTR16C LTR ERVL 324 491 0 833 235 68 24 chr2 249719514 249719808 -968046 + MLT1C LTR MaLR 160 466 -1 324 301 11 0 chr2 249720240 249720333 -967521 + HAL1 LINE L1 125 218 -2289 210 186 23 0 chr2 249720831 249720874 -966980 + MIR SINE MIR 107 150 -58 199 341 71 0 chr2 249721141 249721226 -966628 + L3 LINE CR1 1375 1465 -112 382 345 185 18 chr2 249721934 249722376 -965478 + L1ME3A LINE L1 4479 5700 -421 378 0 0 0 chr2 249722394 249722436 -965418 + (CA)n Simple_repeat Simple_repeat 2 43 0 198 0 0 0 chr2 249723286 249723308 -964546 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 394 287 65 82 chr2 249723351 249723846 -964008 + L1MEc LINE L1 780 1270 -5126 1675 191 56 31 chr2 249723846 249724202 -963652 + MLT1A1 LTR MaLR 1 365 0 394 287 65 82 chr2 249724202 249724479 -963375 + L1MEc LINE L1 1270 1550 -4846 500 339 50 35 chr2 249724483 249724743 -963111 + L1MEc LINE L1 1975 2238 -4158 277 236 98 8 chr2 249724748 249724871 -962983 + L1MEc LINE L1 2225 2358 -3857 1608 202 17 0 chr2 249724923 249725220 -962634 - AluJb SINE Alu -10 302 1 935 242 14 61 chr2 249725222 249725581 -962273 + L1MEc LINE L1 2748 3089 -3126 369 295 55 33 chr2 249725702 249725885 -961969 - HAL1 LINE L1 -2286 221 35 241 289 10 0 chr2 249725882 249725979 -961875 + L1ME3A LINE L1 5847 5944 -226 * 414 292 184 6 chr2 249725980 249726148 -961706 + HAL1 LINE L1 2308 2505 -2 2124 131 0 0 chr2 249726276 249726581 -961273 + AluSg SINE Alu 1 305 -5 1014 292 145 20 chr2 249726617 249727281 -960573 + L1MEd LINE L1 91 837 -5368 666 96 0 75 chr2 249727283 249727471 -960383 + (GGGGA)n Simple_repeat Simple_repeat 5 178 0 592 286 73 18 chr2 249727488 249728236 -959618 + L1MEd LINE L1 845 3039 -3176 * 1274 323 58 19 chr2 249728214 249729053 -958801 + L1MEd LINE L1 11 882 -5514 266 302 10 42 chr2 249729036 249729228 -958626 + L1MEd LINE L1 3506 3691 -2524 * 1454 114 34 86 chr2 249729241 249729369 -958485 + MER2 DNA MER2_type 2 135 -210 477 0 0 0 chr2 249729369 249729422 -958432 + (TG)n Simple_repeat Simple_repeat 2 54 0 198 0 0 0 chr2 249729421 249729443 -958411 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 1454 114 34 86 chr2 249729422 249729453 -958401 + MER2 DNA MER2_type 135 166 -179 1953 118 11 0 chr2 249729453 249729733 -958121 - AluSp SINE Alu -30 283 1 1454 114 34 86 chr2 249729733 249729918 -957936 + MER2 DNA MER2_type 166 309 -36 1284 127 0 0 chr2 249929920 249930101 -757753 + AluSg/x SINE Alu 122 302 -10 22 88 0 0 chr2 249930101 249930158 -757696 + AT_rich Low_complexity Low_complexity 1 57 0 2238 112 7 3 chr2 249930196 249930500 -757354 - AluSq SINE Alu -8 305 1 2135 94 11 4 chr2 249930616 249930921 -756933 - AluY SINE Alu 0 310 4 193 28 0 56 chr2 249931030 249931066 -756788 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 1684 122 0 119 chr2 249931124 249931290 -756564 - AluSx SINE Alu 0 302 196 1739 111 4 0 chr2 249931290 249931524 -756330 - AluY SINE Alu -5 306 72 1684 122 0 119 chr2 249931524 249931700 -756154 - AluSx SINE Alu -106 196 1 1595 179 19 38 chr2 249932242 249932555 -755299 + AluJo SINE Alu 1 307 -5 1417 241 52 37 chr2 249933084 249933486 -754368 + LTR2 LTR ERV1 42 449 0 233 281 62 0 chr2 249933640 249933736 -754118 - L1P LINE L1 -4325 1821 1720 427 317 97 58 chr2 249933746 249934159 -753695 - L1MCa LINE L1 -4961 1465 1037 247 299 35 62 chr2 249934411 249934555 -753299 - L1MCa LINE L1 -5732 684 545 535 307 96 8 chr2 249935265 249935516 -752338 + L2 LINE L2 2369 2641 -673 33 43 0 0 chr2 249936469 249936516 -751338 + GC_rich Low_complexity Low_complexity 1 47 0 22 0 0 0 chr2 249936557 249936579 -751275 + GC_rich Low_complexity Low_complexity 1 22 0 242 104 0 21 chr2 249936682 249936730 -751124 + (CGGG)n Simple_repeat Simple_repeat 2 48 0 30 83 0 0 chr2 249936749 249936821 -751033 + GC_rich Low_complexity Low_complexity 1 72 0 22 70 0 0 chr2 249937064 249937107 -750747 + GC_rich Low_complexity Low_complexity 1 43 0 681 93 298 13 chr2 249942107 249942168 -745686 - MER30 DNA MER1_type -36 194 152 203 79 26 0 chr2 249942168 249942206 -745648 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 681 93 298 13 chr2 249942206 249942295 -745559 - MER30 DNA MER1_type -78 152 1 1063 206 106 46 chr2 249943034 249943403 -744451 - Charlie5 DNA MER1_type 0 2624 2234 266 154 0 31 chr2 249943407 249943472 -744382 - Charlie5 DNA MER1_type -2507 105 43 241 312 82 35 chr2 249943728 249943898 -743956 - L2 LINE L2 -3 3310 3133 2444 65 7 3 chr2 249943985 249944276 -743578 - AluSp SINE Alu -21 292 1 2594 48 3 10 chr2 249945020 249945331 -742523 - AluY SINE Alu -2 309 1 25 0 0 0 chr2 249945333 249945358 -742496 + AT_rich Low_complexity Low_complexity 1 25 0 243 278 96 9 chr2 249945902 249946017 -741837 + L2 LINE L2 2629 2753 -561 823 204 43 0 chr2 249946946 249947108 -740746 - FAM SINE Alu -6 169 1 1848 171 3 16 chr2 249948200 249948504 -739350 - AluJb SINE Alu -12 300 1 586 284 69 72 chr2 249948774 249949107 -738747 - L1MC4a LINE L1 -813 7229 6825 2259 107 0 7 chr2 249949107 249949418 -738436 + AluSq SINE Alu 1 309 0 586 284 69 72 chr2 249949418 249949624 -738230 - L1MC4a LINE L1 -1217 6825 6620 1271 189 65 16 chr2 249949644 249949892 -737962 + AluJb SINE Alu 9 268 -44 1330 284 190 7 chr2 249950095 249950841 -737013 - L1MC4a LINE L1 -337 5825 5297 352 274 47 9 chr2 249950861 249950967 -736887 - L1MC4a LINE L1 -1125 5021 4912 902 218 0 0 chr2 249950967 249951132 -736722 - AluJb SINE Alu -14 298 134 1568 37 32 0 chr2 249951132 249951320 -736534 - AluY SINE Alu -2 309 116 984 192 0 57 chr2 249951326 249951519 -736335 - AluJo SINE Alu -113 199 18 429 328 103 56 chr2 249951520 249951977 -735877 - L1MC4a LINE L1 -1230 4916 4425 2277 103 0 0 chr2 249951977 249952269 -735585 + AluSc SINE Alu 1 292 -17 429 328 103 56 chr2 249952269 249952385 -735469 - L1MC4a LINE L1 -1721 4425 4316 215 317 41 57 chr2 249952506 249952629 -735225 - L2 LINE L2 -199 3073 2953 2099 72 4 4 chr2 249954759 249955021 -732833 + AluY SINE Alu 36 297 -14 1535 191 76 3 chr2 249955217 249955505 -732349 - AluJo SINE Alu -3 309 1 2124 136 0 0 chr2 249957000 249957287 -730567 - AluSx SINE Alu -24 288 2 2267 114 3 7 chr2 249957508 249957815 -730039 - AluSx SINE Alu -6 306 1 1825 119 54 22 chr2 249958249 249958526 -729328 + AluJb SINE Alu 1 286 -26 361 273 67 18 chr2 249959150 249959315 -728539 + MER5B DNA MER1_type 2 174 -4 302 242 222 10 chr2 249959938 249960037 -727817 - MER5B DNA MER1_type -58 120 1 406 263 134 22 chr2 249963045 249963224 -724630 - L1ME1 LINE L1 0 6166 5968 1697 181 24 21 chr2 249963392 249963680 -724174 - AluJb SINE Alu -23 289 1 1717 150 29 11 chr2 249963745 249964018 -723836 + AluJb SINE Alu 26 303 -9 747 168 62 0 chr2 249964137 249964298 -723556 - L1MB4 LINE L1 -6 6174 6004 1463 281 162 18 chr2 249964364 249965505 -722349 - L1MEc LINE L1 -4505 1891 586 268 207 17 0 chr2 249966059 249966117 -721737 - L1MEc LINE L1 -6304 92 34 286 239 146 0 chr2 249966976 249967106 -720748 - L1ME1 LINE L1 -1 6165 6017 644 246 190 52 chr2 249967172 249967602 -720252 - L1M4 LINE L1 -1394 4752 4232 2692 55 0 0 chr2 249967602 249967913 -719941 - AluY SINE Alu 0 311 1 644 246 190 52 chr2 249967913 249968019 -719835 - L1M4 LINE L1 -1914 4232 4142 315 280 37 37 chr2 249968021 249968128 -719726 - L1M4 LINE L1 -2289 3857 3751 224 138 62 0 chr2 249969821 249969886 -717968 + GA-rich Low_complexity Low_complexity 2 70 0 435 232 141 6 chr2 249971463 249971640 -716214 - L1MC4 LINE L1 -134 7908 7708 372 271 48 18 chr2 249971785 249971962 -715892 - L1MC4 LINE L1 -875 7008 6756 240 327 28 9 chr2 249972065 249972172 -715682 - MIR SINE MIR -43 219 111 188 386 29 0 chr2 249974112 249974182 -713672 + MER5B DNA MER1_type 4 75 -103 941 163 0 12 chr2 249976369 249976529 -711325 - AluSq SINE Alu -19 294 137 363 83 0 0 chr2 249976628 249976676 -711178 + Alu SINE Alu 8 55 -247 2483 66 7 0 chr2 249976858 249977163 -710691 - AluSp SINE Alu -6 307 1 2519 48 0 0 chr2 249981542 249981836 -706018 + AluY SINE Alu 1 294 -17 2018 138 0 3 chr2 249982717 249983022 -704832 - AluSg SINE Alu -6 304 1 398 305 24 49 chr2 249985664 249985828 -702026 + L1MEd LINE L1 892 1051 -5068 2341 74 3 3 chr2 249986654 249986964 -700890 + AluSx SINE Alu 2 311 -1 373 206 20 82 chr2 249989484 249989555 -698299 + MLT1K LTR MaLR 446 505 -83 1710 110 0 0 chr2 249989555 249989782 -698072 - AluSg SINE Alu -83 227 1 373 206 20 82 chr2 249989782 249989856 -697998 + MLT1K LTR MaLR 505 582 -6 225 200 0 20 chr2 249990270 249990320 -697534 + LTR16A1 LTR ERVL 398 446 -11 834 149 0 8 chr2 249990802 249990936 -696918 - FLAM_C SINE Alu -10 133 1 206 338 70 21 chr2 249992236 249992378 -695476 + L2 LINE L2 3119 3267 -46 228 163 82 0 chr2 249992745 249992794 -695060 + tRNA-Arg-AGG tRNA tRNA 24 76 0 1737 141 47 13 chr2 249992819 249993117 -694737 + AluJb SINE Alu 3 310 -2 1128 189 52 90 chr2 249994528 249994625 -693229 + MLT1C-int LTR MaLR 1039 1138 -233 2431 60 0 0 chr2 249994625 249994924 -692930 - AluY SINE Alu -12 299 1 1128 189 52 90 chr2 249994924 249995169 -692685 + MLT1C-int LTR MaLR 1138 1368 -3 906 233 157 13 chr2 249995172 249995554 -692300 + MLT1C LTR MaLR 1 437 -30 212 274 119 0 chr2 249999769 249999853 -688001 - L2 LINE L2 -208 3105 3012 244 241 117 21 chr2 250002412 250002557 -685297 + MLT1J1 LTR MaLR 264 422 -24 182 320 170 0 chr2 250004283 250004383 -683471 + MER5B DNA MER1_type 1 117 -61 2134 130 0 0 chr2 250005027 250005326 -682528 + AluSx SINE Alu 1 299 -13 1439 152 34 4 chr2 250005337 250005574 -682280 + AluJb SINE Alu 39 282 -30 2171 95 0 0 chr2 250005578 250005890 -681964 + AluSx SINE Alu 1 312 0 300 311 76 8 chr2 250005890 250006022 -681832 + L1ME LINE L1 5430 5570 -596 414 0 0 0 chr2 250006093 250006139 -681715 + (CA)n Simple_repeat Simple_repeat 2 47 0 950 114 29 132 chr2 250008088 250008360 -679494 - Tigger7 DNA MER2_type -9 2482 2239 2238 87 0 37 chr2 250008360 250008681 -679173 + AluY SINE Alu 1 309 -2 238 214 38 69 chr2 250008731 250008803 -679051 + L1M4 LINE L1 4414 4482 -1664 2231 107 10 0 chr2 250008803 250009113 -678741 + AluSq SINE Alu 1 313 0 238 214 38 69 chr2 250009113 250009171 -678683 + L1M4 LINE L1 4482 4540 -1606 363 298 25 63 chr2 250009224 250009382 -678472 + L1M4 LINE L1 2304 2455 -3691 2126 114 16 0 chr2 250009608 250009915 -677939 + AluSx SINE Alu 1 312 0 2699 192 88 14 chr2 250009927 250010319 -677535 - L1MB3 LINE L1 -27 6156 5692 1377 187 118 44 chr2 250010319 250010638 -677216 + MLT1B LTR MaLR 1 352 -38 2149 81 42 0 chr2 250010638 250010923 -676931 - AluSp SINE Alu -16 297 1 1377 187 118 44 chr2 250010923 250010966 -676888 + MLT1B LTR MaLR 352 390 0 2699 192 88 14 chr2 250010966 250011241 -676613 - L1MB3 LINE L1 -491 5692 5439 180 308 131 19 chr2 250014786 250014893 -672961 + MIR SINE MIR 30 148 -60 490 219 0 12 chr2 250014925 250015089 -672765 + CT-rich Low_complexity Low_complexity 3 164 0 541 189 6 24 chr2 250015134 250015298 -672556 + CT-rich Low_complexity Low_complexity 3 163 0 267 240 0 0 chr2 250015300 250015350 -672504 + C-rich Low_complexity Low_complexity 3 52 0 2463 38 0 0 chr2 250016324 250016616 -671238 - AluY SINE Alu -19 292 1 405 361 124 59 chr2 250016934 250017161 -670693 - L1MB3 LINE L1 -797 5349 5138 2240 86 0 7 chr2 250017161 250017453 -670401 - AluSg SINE Alu -20 290 1 405 361 124 59 chr2 250017453 250017499 -670355 - L1MB3 LINE L1 -1008 5138 5096 1835 148 0 32 chr2 250017499 250017810 -670044 - AluSx SINE Alu -11 301 1 405 361 124 59 chr2 250017810 250018178 -669676 - L1MB3 LINE L1 -1050 5096 4753 782 188 0 8 chr2 250018178 250018311 -669543 + AluJo/FLAM SINE Alu 2 133 -169 2271 94 0 0 chr2 250018313 250018612 -669242 + AluSc SINE Alu 1 299 -10 405 361 124 59 chr2 250018612 250018653 -669201 - L1MB3 LINE L1 -1393 4753 4716 2047 116 14 0 chr2 250018653 250018945 -668909 + AluSx SINE Alu 1 296 -16 405 361 124 59 chr2 250018945 250018981 -668873 - L1MB3 LINE L1 -1430 4716 4578 477 101 58 0 chr2 250019078 250019147 -668707 - AluJb SINE Alu -28 284 212 311 284 32 11 chr2 250019196 250019291 -668563 - MIR3 SINE MIR -6 202 106 518 107 0 0 chr2 250020951 250021026 -666828 - Alu SINE Alu -6 306 232 238 284 67 8 chr2 250021489 250021623 -666231 - L1MEc LINE L1 -6143 253 112 2270 85 3 0 chr2 250021767 250022061 -665793 - AluSx SINE Alu -17 295 1 1358 118 38 68 chr2 250022450 250022687 -665167 - MER30 DNA MER1_type 0 230 1 310 292 79 79 chr2 250023372 250023803 -664051 - L1MC4 LINE L1 -263 7545 7115 668 60 0 0 chr2 250024222 250024305 -663549 + AluSg/x SINE Alu 166 248 -62 1383 126 5 0 chr2 250024305 250024519 -663335 + AluY SINE Alu 83 297 -14 1691 92 4 4 chr2 250025549 250025776 -662078 - AluSc SINE Alu -17 292 66 1816 128 0 0 chr2 250025780 250026029 -661825 - AluSx SINE Alu -63 249 1 2296 102 0 10 chr2 250026217 250026531 -661323 + AluSq SINE Alu 1 311 -2 302 229 42 139 chr2 250026741 250026765 -661089 - L2 LINE L2 -6 3307 3282 1851 153 7 52 chr2 250026765 250026902 -660952 + AluJo SINE Alu 1 143 -169 2233 118 20 0 chr2 250026902 250027207 -660647 + AluSq SINE Alu 3 313 0 1851 153 7 52 chr2 250027207 250027376 -660478 + AluJo SINE Alu 143 293 -19 302 229 42 139 chr2 250027376 250027415 -660439 - L2 LINE L2 -31 3282 3241 2003 164 35 5 chr2 250027415 250027818 -660036 + L1MB3 LINE L1 5768 6182 -1 302 229 42 139 chr2 250027818 250027919 -659935 - L2 LINE L2 -72 3241 3158 1154 313 64 39 chr2 250027919 250028003 -659851 + L1MEc LINE L1 34 114 -6282 2406 88 0 3 chr2 250028003 250028309 -659545 + AluY SINE Alu 1 305 -6 1154 313 64 39 chr2 250028309 250029569 -658285 + L1MEc LINE L1 114 1544 -4852 725 150 0 0 chr2 250029570 250029683 -658171 + AluJo/FLAM SINE Alu 2 114 -198 2011 116 78 0 chr2 250029684 250029968 -657886 - AluSx SINE Alu -6 306 1 46 0 0 0 chr2 250029975 250030021 -657833 + AT_rich Low_complexity Low_complexity 1 46 0 398 276 128 36 chr2 250030023 250030301 -657553 + L1MEc LINE L1 1527 1837 -4559 2209 131 3 10 chr2 250030301 250030615 -657239 - AluSx SINE Alu 0 312 1 398 276 128 36 chr2 250030615 250030640 -657214 + L1MEc LINE L1 1837 1858 -4538 1479 244 25 45 chr2 250030741 250031392 -656462 + L1MEc LINE L1 2063 2667 -3548 222 266 62 0 chr2 250031536 250031600 -656254 + MIR SINE MIR 125 192 -70 373 252 176 0 chr2 250032781 250032940 -654914 - MER5A DNA MER1_type 0 189 3 274 214 61 31 chr2 250033636 250033734 -654120 - MIR SINE MIR -116 146 46 2473 69 0 0 chr2 250036776 250037066 -650788 + AluY SINE Alu 1 290 -21 2374 59 0 14 chr2 250037081 250037395 -650459 + AluY SINE Alu 1 310 0 2238 112 7 3 chr2 250037511 250037815 -650039 + AluSq SINE Alu 1 305 -8 22 88 0 0 chr2 250037853 250037910 -649944 + AT_rich Low_complexity Low_complexity 1 57 0 2279 119 0 0 chr2 250037910 250038212 -649642 - AluSx SINE Alu -10 302 1 823 153 0 0 chr2 250038230 250038361 -649493 - FLAM_C SINE Alu -2 131 1 1736 151 0 15 chr2 250038798 250039063 -648791 + AluJo SINE Alu 38 298 -14 1613 187 0 43 chr2 250039063 250039389 -648465 + AluJo SINE Alu 1 312 0 2157 85 11 4 chr2 250040024 250040294 -647560 + AluY SINE Alu 27 298 -13 713 197 8 0 chr2 250043102 250043229 -644625 - FLAM_C SINE Alu -5 128 1 235 250 8 8 chr2 250045986 250046114 -641740 + (CA)n Simple_repeat Simple_repeat 2 129 0 634 241 34 54 chr2 250046122 250046293 -641561 - L1MC5 LINE L1 -291 7670 7506 1831 169 7 17 chr2 250046293 250046589 -641265 - AluJo SINE Alu -19 293 1 634 241 34 54 chr2 250046589 250046711 -641143 - L1MC5 LINE L1 -455 7506 7383 289 261 122 0 chr2 250047175 250047290 -640564 + MER94 DNA DNA 2 130 -4 21 57 0 0 chr2 250047403 250047438 -640416 + AT_rich Low_complexity Low_complexity 1 35 0 207 194 177 0 chr2 250047626 250047688 -640166 + MIR SINE MIR 66 138 -124 2203 94 7 55 chr2 250048264 250048572 -639282 - AluSx SINE Alu -19 293 1 2368 110 0 0 chr2 250048768 250049078 -638776 - AluSg SINE Alu 0 310 1 191 301 79 42 chr2 250050428 250050644 -637210 + L2 LINE L2 2505 2728 -586 355 332 88 21 chr2 250050664 250050857 -636997 + MIR SINE MIR 44 249 -13 239 349 27 34 chr2 250051109 250051258 -636596 - L2 LINE L2 -701 2613 2466 209 278 11 33 chr2 250051756 250051846 -636008 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 22 35 0 0 chr2 250052225 250052254 -635600 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 250052308 250052329 -635525 + GC_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 250053983 250054021 -633833 + GC_rich Low_complexity Low_complexity 1 38 0 301 295 195 7 chr2 250054180 250054329 -633525 + L2 LINE L2 2553 2729 -585 396 297 71 26 chr2 250055177 250055332 -632522 - HAL1b LINE L1 -438 910 749 1663 147 18 11 chr2 250055336 250055608 -632246 - AluJb SINE Alu -9 303 30 245 282 148 20 chr2 250056341 250056490 -631364 - L1ME LINE L1 -271 5899 5732 182 125 0 25 chr2 250056496 250056536 -631318 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 398 271 9 48 chr2 250056797 250057007 -630847 - L1ME LINE L1 -777 5369 5168 643 87 0 39 chr2 250057017 250057120 -630734 - AluSc SINE Alu -10 299 201 1889 114 0 0 chr2 250057121 250057367 -630487 - AluSc SINE Alu -47 262 17 258 287 82 0 chr2 250057370 250057492 -630362 - L1ME LINE L1 -983 5163 5032 507 203 31 8 chr2 250057497 250057625 -630229 - FLAM_A SINE Alu -1 141 11 2469 70 0 0 chr2 250057765 250058066 -629788 + AluY SINE Alu 1 301 -10 374 190 26 69 chr2 250058066 250058182 -629672 + MLT1C LTR MaLR 203 313 -154 660 291 154 7 chr2 250058228 250058534 -629320 - MER115 DNA AcHobo -251 442 92 344 223 0 78 chr2 250058726 250058829 -629025 + L1MD2 LINE L1 6059 6153 -206 198 143 0 0 chr2 250058845 250058880 -628974 + (CA)n Simple_repeat Simple_repeat 1 35 0 514 226 116 14 chr2 250058882 250059028 -628826 + L1MD2 LINE L1 6137 6297 -62 217 310 14 0 chr2 250059300 250059371 -628483 + CT-rich Low_complexity Low_complexity 1 72 0 2430 73 0 29 chr2 250059403 250059717 -628137 - AluY SINE Alu -6 305 1 216 204 11 114 chr2 250061318 250061406 -626448 - L2 LINE L2 -1051 2263 2185 1763 161 7 25 chr2 250061680 250061960 -625894 - AluJo SINE Alu -17 295 21 1567 97 50 93 chr2 250062559 250062818 -625036 + AluJo SINE Alu 34 281 -31 513 277 59 9 chr2 250064414 250064629 -623225 + MIR SINE MIR 14 243 -19 948 209 58 4 chr2 250067476 250067701 -620153 - MER8 DNA MER2_type -2 237 1 357 210 81 89 chr2 250068782 250068906 -618948 - L1ME LINE L1 -448 5673 5551 2232 113 3 0 chr2 250068977 250069277 -618577 - AluSp SINE Alu -12 301 1 415 241 184 0 chr2 250069631 250069859 -617995 - L2 LINE L2 -519 2795 2526 2038 72 28 45 chr2 250070419 250070710 -617144 - AluY SINE Alu 0 311 26 2190 127 3 0 chr2 250070905 250071204 -616650 - AluSg SINE Alu -10 300 1 2557 61 0 0 chr2 250071530 250071827 -616027 + AluY SINE Alu 1 297 -14 220 250 19 0 chr2 250072727 250072779 -615075 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 241 288 83 38 chr2 250073233 250073333 -614521 - MLT1J LTR MaLR -350 161 52 391 333 104 16 chr2 250073333 250073642 -614212 + MER46C DNA MER2_type 1 336 -2 241 288 83 38 chr2 250073642 250073673 -614181 - MLT1J LTR MaLR -459 52 24 311 204 41 10 chr2 250073889 250073987 -613867 + GA-rich Low_complexity Low_complexity 1 101 0 1749 120 86 0 chr2 250074105 250074372 -613482 - AluJo SINE Alu -19 293 4 2023 129 7 10 chr2 250074677 250074980 -612874 - AluSx SINE Alu -10 302 1 2586 71 0 0 chr2 250077348 250077659 -610195 - AluY SINE Alu 0 311 1 2201 111 0 10 chr2 250077661 250077959 -609895 - AluSg SINE Alu -15 295 1 1222 45 0 0 chr2 250077959 250078093 -609761 - AluY SINE Alu -177 134 1 311 197 137 51 chr2 250078199 250078316 -609538 - L1ME4a LINE L1 -11 6110 5984 2209 110 3 3 chr2 250079142 250079442 -608412 - AluSp SINE Alu -13 300 1 2571 59 0 10 chr2 250079500 250079806 -608048 + AluY SINE Alu 1 303 -8 919 230 104 11 chr2 250080631 250081075 -606779 - L1MEc LINE L1 -2925 3290 2806 1141 233 80 30 chr2 250081077 250081594 -606260 - L1MEc LINE L1 -3597 2618 2103 4471 161 31 41 chr2 250081624 250082470 -605384 - L1MB7 LINE L1 -18 6166 5323 2404 101 0 0 chr2 250082470 250082767 -605087 - AluSx SINE Alu -15 297 1 4471 161 31 41 chr2 250082767 250082982 -604872 - L1MB7 LINE L1 -861 5323 5107 2638 46 0 7 chr2 250083208 250083512 -604342 + AluY SINE Alu 1 302 -9 2969 201 14 54 chr2 250084255 250085066 -602788 - L1M4 LINE L1 -971 5175 4398 405 297 157 38 chr2 250085070 250085306 -602548 - HAL1b LINE L1 -700 648 385 400 185 17 42 chr2 250089262 250089381 -598473 + LTR41 LTR ERVL 652 767 -6 399 222 0 31 chr2 250089386 250089548 -598306 + (TATG)n Simple_repeat Simple_repeat 2 158 0 235 221 47 0 chr2 250089563 250089649 -598205 + L1MC4 LINE L1 6615 6704 -1338 239 158 18 18 chr2 250090034 250090091 -597763 + MIR SINE MIR 60 116 -92 1352 177 54 32 chr2 250092666 250092982 -594872 - L1MB2 LINE L1 -165 6006 5684 917 217 43 0 chr2 250092983 250093167 -594687 + MER58A DNA MER1_type 33 224 0 257 89 22 0 chr2 250093410 250093455 -594399 + (TCCCC)n Simple_repeat Simple_repeat 3 48 0 322 305 123 0 chr2 250093655 250093809 -594045 + MIR SINE MIR 82 254 -8 2201 97 11 4 chr2 250097930 250098234 -589620 - AluSg SINE Alu 0 306 1 2356 113 0 10 chr2 250098439 250098741 -589113 - AluSx SINE Alu -13 299 1 2395 94 0 0 chr2 250098809 250099108 -588746 - AluSq SINE Alu -12 301 3 2058 151 3 3 chr2 250099330 250099635 -588219 - AluJo SINE Alu -7 305 1 2444 68 3 0 chr2 250100914 250101207 -586647 - AluSx SINE Alu -18 294 1 271 161 65 16 chr2 250101237 250101299 -586555 - Tigger2a DNA MER2_type -232 212 148 2977 127 62 2 chr2 250101483 250101980 -585874 + MER1A DNA MER1_type 1 527 0 1335 109 44 18 chr2 250102087 250102316 -585538 - Tigger2a DNA MER2_type -4 440 206 1331 131 15 10 chr2 250102316 250102514 -585340 + AluJb SINE Alu 101 299 -13 966 126 109 6 chr2 250102518 250102693 -585161 - Tigger2a DNA MER2_type -240 194 2 2238 99 14 0 chr2 250103603 250103896 -583958 + AluSx SINE Alu 1 297 -15 345 259 0 12 chr2 250104100 250104185 -583669 + L2 LINE L2 3166 3249 -23 321 219 135 0 chr2 250104907 250105003 -582851 - MER94 DNA DNA -24 110 2 348 227 0 0 chr2 250106851 250106970 -580884 + (ATG)n Simple_repeat Simple_repeat 3 121 0 605 156 46 0 chr2 250108215 250108324 -579530 + MER20 DNA MER1_type 104 217 -2 504 225 50 0 chr2 250110501 250110621 -577233 + MER58A DNA MER1_type 1 126 0 279 237 17 0 chr2 250110635 250110694 -577160 + MER58A DNA MER1_type 157 216 -8 3231 127 143 5 chr2 250112009 250112083 -575771 + Tigger3b DNA MER2_type 31 93 -2935 2001 138 0 7 chr2 250112083 250112366 -575488 - AluSx SINE Alu -4 308 28 3231 127 143 5 chr2 250112366 250112935 -574919 + Tigger3b DNA MER2_type 93 763 -468 1528 192 68 3 chr2 250112950 250113273 -574581 + Tigger3b DNA MER2_type 888 1231 0 245 234 0 39 chr2 250113930 250114007 -573847 + MER103 DNA DNA 10 83 -83 226 345 25 6 chr2 250116020 250116152 -571702 + MIR SINE MIR 41 175 -82 4138 261 81 62 chr2 250116301 250116811 -571043 + L1MEc LINE L1 34 533 -5863 2449 84 3 3 chr2 250116811 250117121 -570733 + AluSx SINE Alu 1 310 -2 4138 261 81 62 chr2 250117121 250118524 -569330 + L1MEc LINE L1 533 1999 -4397 2261 94 0 53 chr2 250118524 250118843 -569011 + AluSq SINE Alu 1 302 -11 4138 261 81 62 chr2 250118843 250119250 -568604 + L1MEc LINE L1 1999 2397 -3999 530 273 204 23 chr2 250119482 250120051 -567803 + L2 LINE L2 2643 3312 -1 286 173 0 19 chr2 250120051 250120103 -567751 + L2 LINE L2 3221 3271 -1 222 293 203 24 chr2 250120114 250120237 -567617 - MIR3 SINE MIR -5 203 59 282 261 109 29 chr2 250120360 250120498 -567356 + MIR3 SINE MIR 30 178 -30 188 135 27 0 chr2 250121565 250121602 -566252 + GA-rich Low_complexity Low_complexity 3 40 0 666 286 120 46 chr2 250122076 250122677 -565177 - L1MC5 LINE L1 -826 6982 6413 2260 111 3 0 chr2 250122677 250122975 -564879 - AluSx SINE Alu -13 299 1 666 286 120 46 chr2 250122975 250123549 -564305 - L1MC5 LINE L1 -1395 6413 5883 2465 60 0 0 chr2 250123549 250123847 -564007 - AluY SINE Alu -13 298 1 2336 97 0 0 chr2 250123847 250124146 -563708 - AluSx SINE Alu -13 299 1 3817 179 61 21 chr2 250124157 250124566 -563288 - L1MB7 LINE L1 0 6184 5793 2388 74 0 0 chr2 250124566 250124875 -562979 - AluSg SINE Alu -1 309 1 3817 179 61 21 chr2 250124875 250125375 -562479 - L1MB7 LINE L1 -391 5793 5239 1581 229 44 18 chr2 250125377 250125879 -561975 - L1M4 LINE L1 -816 5330 4816 2352 38 42 0 chr2 250125881 250126168 -561686 - AluY SINE Alu -12 299 1 251 190 0 0 chr2 250126222 250126280 -561574 - L1M4 LINE L1 -1321 4825 4768 707 91 0 40 chr2 250126285 250126384 -561470 - AluSq/x SINE Alu -204 109 15 1258 297 124 29 chr2 250126414 250127794 -560060 + L1ME LINE L1 4201 5718 -452 229 338 111 15 chr2 250128967 250129165 -558689 + L3 LINE CR1 1345 1561 -16 212 179 86 0 chr2 250138721 250138838 -549016 + (CGGG)n Simple_repeat Simple_repeat 3 129 0 207 300 0 14 chr2 250139010 250139080 -548774 + GA-rich Low_complexity Low_complexity 3 71 0 26 30 0 0 chr2 250140619 250140652 -547202 + AT_rich Low_complexity Low_complexity 1 33 0 2124 262 75 73 chr2 250140935 250141101 -546753 - L1ME2 LINE L1 -284 6675 6511 1790 97 131 11 chr2 250141101 250141369 -546485 - AluSg SINE Alu 0 300 1 2124 262 75 73 chr2 250141369 250142024 -545830 - L1ME2 LINE L1 -448 6511 5859 1590 166 55 7 chr2 250142024 250142314 -545540 - AluJo SINE Alu -8 304 1 2124 262 75 73 chr2 250142314 250142494 -545360 - L1ME2 LINE L1 -1100 5859 5681 2207 92 14 0 chr2 250142494 250142788 -545066 + AluSq SINE Alu 1 298 -15 2124 262 75 73 chr2 250142788 250144013 -543841 - L1ME2 LINE L1 -1278 5681 4035 2352 71 0 0 chr2 250144013 250144307 -543547 - AluY SINE Alu -17 294 1 2124 262 75 73 chr2 250144307 250144406 -543448 - L1ME2 LINE L1 -2924 4035 3938 253 313 66 4 chr2 250144460 250144687 -543167 - L1ME2 LINE L1 -2924 4017 3777 * 426 262 123 15 chr2 250144664 250144988 -542866 - L1ME2 LINE L1 -3640 3301 2943 1663 163 45 3 chr2 250145268 250145557 -542297 - AluJo SINE Alu -4 308 8 288 0 0 0 chr2 250145563 250145595 -542259 + (TA)n Simple_repeat Simple_repeat 2 33 0 2178 99 7 0 chr2 250145595 250145879 -541975 - AluSq SINE Alu -27 286 1 478 257 68 68 chr2 250145882 250146095 -541759 - L1ME2 LINE L1 -4862 2069 1857 2425 53 0 3 chr2 250146095 250146395 -541459 + AluY SINE Alu 1 299 -12 478 257 68 68 chr2 250146395 250146561 -541293 - L1ME2 LINE L1 -5074 1857 1692 832 177 0 0 chr2 250146561 250146691 -541163 + FLAM_C SINE Alu 2 131 -2 478 257 68 68 chr2 250146691 250147074 -540780 - L1ME2 LINE L1 -5239 1692 1173 373 293 114 28 chr2 250147496 250147840 -540014 - HAL1 LINE L1 -943 1564 1170 2304 100 0 0 chr2 250147840 250148141 -539713 - AluSx SINE Alu -11 301 1 373 293 114 28 chr2 250148141 250148253 -539601 - HAL1 LINE L1 -1337 1170 1069 1378 159 4 4 chr2 250148392 250148619 -539235 - AluJb SINE Alu -14 298 72 385 311 73 30 chr2 250151905 250152233 -535621 - MER115 DNA AcHobo -324 369 28 21 36 0 0 chr2 250152733 250152761 -535093 + AT_rich Low_complexity Low_complexity 1 28 0 249 291 47 0 chr2 250154891 250155063 -532791 + (CAGGA)n Simple_repeat Simple_repeat 1 180 0 231 240 0 0 chr2 250155278 250155328 -532526 - Charlie7 DNA MER1_type 0 2612 2563 1368 268 145 7 chr2 250155328 250155801 -532053 - L1M4 LINE L1 -3298 2848 2281 2191 85 7 23 chr2 250155801 250156108 -531746 - AluSc SINE Alu -2 307 6 1368 268 145 7 chr2 250156108 250156208 -531646 - L1M4 LINE L1 -3865 2281 2196 3509 233 31 17 chr2 250156211 250157932 -529922 - L1MD2 LINE L1 -230 6198 4444 367 369 19 40 chr2 250158306 250158631 -529223 - L1ME2 LINE L1 -6217 724 407 * 1172 224 57 5 chr2 250158622 250159041 -528813 - L1MD2 LINE L1 -4002 2394 1954 1124 178 14 19 chr2 250159055 250159269 -528585 + MER58A DNA MER1_type 3 215 -9 1095 265 132 36 chr2 250159278 250159947 -527907 - L1MD2 LINE L1 -4453 1943 1211 957 296 109 13 chr2 250160053 250160684 -527170 - L1MD2 LINE L1 -5124 1272 581 919 280 121 7 chr2 250160686 250161132 -526722 - L1MD2 LINE L1 -5865 531 35 381 334 115 23 chr2 250161138 250161257 -526597 - Charlie7 DNA MER1_type -2015 597 490 2200 120 0 13 chr2 250161257 250161573 -526281 - AluSx SINE Alu 0 312 1 381 334 115 23 chr2 250161573 250161923 -525931 - Charlie7 DNA MER1_type -2122 490 85 313 273 45 30 chr2 250162208 250162340 -525514 - MIR3 SINE MIR -7 201 68 496 309 75 19 chr2 250164457 250164764 -523090 - Charlie2 DNA MER1_type -249 2613 2290 212 254 62 77 chr2 250164966 250165096 -522758 - L2 LINE L2 -2741 573 446 341 189 5 100 chr2 250166867 250167057 -520797 + C-rich Low_complexity Low_complexity 3 174 0 256 225 23 64 chr2 250167072 250167245 -520609 + C-rich Low_complexity Low_complexity 3 168 0 478 311 94 14 chr2 250170083 250170295 -517559 + L1MC/D LINE L1 5259 5487 -2321 1726 56 0 5 chr2 250170328 250170544 -517310 - L1PA5 LINE L1 0 6154 5940 2147 117 0 0 chr2 250170610 250170908 -516946 - AluSx SINE Alu -14 298 1 9591 147 17 0 chr2 250372426 250373968 -313886 - L1M1 LINE L1 -4857 2708 1141 1563 320 106 17 chr2 250374165 250375602 -312252 - L1MC4a LINE L1 -748 5398 4673 242 321 213 17 chr2 250375788 250376084 -311770 + L2 LINE L2 2912 3265 -48 809 178 9 0 chr2 250376104 250376321 -311533 + (TGGA)n Simple_repeat Simple_repeat 1 219 0 2695 183 26 24 chr2 250376421 250377410 -310444 - L1MB8 LINE L1 -286 5892 4902 388 259 176 55 chr2 250377441 250377804 -310050 - L1ME4a LINE L1 0 6121 5715 233 100 40 20 chr2 250377872 250377922 -309932 - MLT2A1 LTR ERVL 0 444 394 200 111 28 0 chr2 250377927 250377963 -309891 + (TA)n Simple_repeat Simple_repeat 2 38 0 335 198 66 55 chr2 250377966 250378057 -309797 - L1MC4 LINE L1 -1339 6703 6612 313 141 59 0 chr2 250378057 250378142 -309712 + (TA)n Simple_repeat Simple_repeat 1 90 0 2598 94 41 13 chr2 250378150 250378543 -309311 - MLT2A1 LTR ERVL -40 404 1 23 0 0 0 chr2 250378555 250378578 -309276 + AT_rich Low_complexity Low_complexity 1 23 0 278 258 65 58 chr2 250378580 250378735 -309119 - L1ME4a LINE L1 -2 6119 5964 2091 117 7 3 chr2 250378753 250379061 -308793 - AluSx SINE Alu -3 309 1 1363 136 95 8 chr2 250379204 250379447 -308407 + MSTA LTR MaLR 150 413 -15 327 175 0 0 chr2 250379444 250379501 -308353 + MSTA LTR MaLR 357 413 -15 * 449 167 0 0 chr2 250379498 250379570 -308284 + MSTA LTR MaLR 357 428 0 * 1131 195 52 12 chr2 250379570 250379818 -308036 + MLT1C LTR MaLR 88 345 -122 1456 223 92 66 chr2 250380045 250380102 -307752 - MLT1F1 LTR MaLR 0 567 513 1784 171 0 0 chr2 250380102 250380394 -307460 - AluJb SINE Alu -20 292 1 1456 223 92 66 chr2 250380394 250380883 -306971 - MLT1F1 LTR MaLR -54 513 7 22 0 0 0 chr2 250382418 250382440 -305414 + AT_rich Low_complexity Low_complexity 1 22 0 6890 252 48 13 chr2 250382441 250383523 -304331 + L1M4 LINE L1 2563 3607 -2539 1686 184 0 7 chr2 250383523 250383827 -304027 + AluJb SINE Alu 10 311 -1 6890 252 48 13 chr2 250383827 250384990 -302864 + L1M4 LINE L1 3607 4885 -1261 456 271 31 0 chr2 250385128 250385257 -302597 + L1MA10 LINE L1 6173 6305 -29 798 282 70 64 chr2 250385280 250385661 -302193 + L2 LINE L2 2810 3196 -117 366 80 0 0 chr2 250385661 250385711 -302143 + (CA)n Simple_repeat Simple_repeat 2 51 0 798 282 70 64 chr2 250385711 250385829 -302025 + L2 LINE L2 3196 3312 -1 703 228 35 12 chr2 250386548 250386719 -301135 - MLT1D LTR MaLR -301 204 30 1579 151 65 73 chr2 250386834 250387204 -300650 + MLT1B LTR MaLR 8 374 -16 255 318 55 0 chr2 250387744 250387854 -300000 - L2 LINE L2 -32 3240 3125 1104 188 10 0 chr2 250388386 250388583 -299271 - LTR31 LTR ERV1 -376 243 45 219 36 0 0 chr2 250388584 250388612 -299242 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 2014 127 6 13 chr2 250388635 250388949 -298905 + AluSx SINE Alu 1 312 0 685 241 43 0 chr2 250391066 250391228 -296626 + L1MB3 LINE L1 5628 5796 -387 1631 195 30 52 chr2 250391229 250391634 -296220 - MSTB1 LTR MaLR 0 432 37 227 180 0 0 chr2 250391680 250391730 -296124 - MSTB2 LTR MaLR -364 93 44 * 494 135 45 0 chr2 250391728 250391817 -296037 - MSTB2 LTR MaLR -364 93 1 1592 159 86 38 chr2 250391817 250392138 -295716 + L1MB3 LINE L1 5793 6136 -47 1870 85 63 0 chr2 250392138 250392409 -295445 + AluSc SINE Alu 1 288 -21 1592 159 86 38 chr2 250392409 250392458 -295396 + L1MB3 LINE L1 6136 6181 -2 450 346 78 22 chr2 250392455 250392915 -294939 + L1ME3A LINE L1 5414 5914 -256 * 2136 99 0 0 chr2 250392918 250393200 -294654 - AluSg SINE Alu -13 297 16 2264 156 70 7 chr2 250393791 250394194 -293660 - MSTA LTR MaLR 0 428 1 1839 98 6 22 chr2 250395586 250396114 -291740 - MER4A LTR ERV1 -19 645 1 378 321 144 53 chr2 250396597 250397180 -290674 - L1M4 LINE L1 -749 5397 4762 1076 210 84 56 chr2 250397618 250397940 -289914 + MLT1A1 LTR MaLR 16 365 0 191 230 153 59 chr2 250399307 250399601 -288253 + L2 LINE L2 2351 2757 -557 2426 107 81 8 chr2 250399829 250400223 -287631 + MSTA LTR MaLR 1 423 -5 299 232 155 7 chr2 250401832 250401974 -285880 - MIR SINE MIR -48 214 52 455 241 75 0 chr2 250402002 250402135 -285719 - MLT1E1 LTR MaLR 0 654 512 2058 215 41 10 chr2 250402244 250402736 -285118 + L1MB3 LINE L1 5628 6134 -49 330 232 11 42 chr2 250404970 250405065 -282789 + GA-rich Low_complexity Low_complexity 1 92 0 285 200 0 0 chr2 250405542 250405597 -282257 + L2 LINE L2 3198 3252 -61 346 289 187 22 chr2 250408436 250408709 -279145 + HAL1 LINE L1 1991 2308 -199 503 172 30 0 chr2 250409176 250409275 -278579 - MLT1C LTR MaLR 0 542 441 412 239 43 43 chr2 250409355 250409493 -278361 - MLT1F1 LTR MaLR -428 139 2 445 261 176 0 chr2 250410529 250410682 -277172 - MER20 DNA MER1_type 0 219 40 232 265 0 85 chr2 250410854 250411043 -276811 + (TGG)n Simple_repeat Simple_repeat 2 174 0 215 242 0 91 chr2 250411104 250411302 -276552 + (TGG)n Simple_repeat Simple_repeat 1 180 0 * 293 149 119 71 chr2 250411274 250411442 -276412 + (ATGGTG)n Simple_repeat Simple_repeat 3 178 0 270 228 0 96 chr2 250411385 250411582 -276272 + (TGG)n Simple_repeat Simple_repeat 3 180 0 * 201 189 126 31 chr2 250411555 250411682 -276172 + (ATGGTG)n Simple_repeat Simple_repeat 3 141 0 * 320 155 162 14 chr2 250411694 250411842 -276012 + (ATGGTG)n Simple_repeat Simple_repeat 3 172 0 313 168 108 60 chr2 250411884 250412051 -275803 + (ATGGTG)n Simple_repeat Simple_repeat 4 178 0 1177 216 81 33 chr2 250412838 250413172 -274682 - MLT1C LTR MaLR -65 402 53 265 157 113 43 chr2 250413746 250413892 -273962 + L1M4 LINE L1 5189 5358 -788 526 294 55 38 chr2 250413957 250414301 -273553 + LTR16A1 LTR ERVL 1 350 -107 234 324 69 0 chr2 250415988 250416133 -271721 + MER45A DNA AcHobo 2 156 -22 585 237 93 52 chr2 250416998 250417312 -270542 - MLT1C LTR MaLR -154 351 3 195 288 0 15 chr2 250417323 250417389 -270465 + MIR SINE MIR 81 145 -63 226 310 35 11 chr2 250418483 250418570 -269284 + MER69 DNA AcHobo 4 92 -2434 282 262 58 29 chr2 250419419 250419522 -268332 - MIR SINE MIR -81 127 22 543 264 264 9 chr2 250420012 250420353 -267501 + MLT1K LTR MaLR 4 431 -157 228 234 31 0 chr2 250421253 250421317 -266537 + (CTGGGG)n Simple_repeat Simple_repeat 3 68 0 348 293 0 19 chr2 250421507 250421613 -266241 + MER5B DNA MER1_type 75 178 0 1525 295 66 59 chr2 250423006 250424008 -263846 - L1ME3A LINE L1 -8 6162 5155 257 315 27 9 chr2 250424351 250424462 -263392 + MIR3 SINE MIR 76 188 -20 260 339 33 0 chr2 250424529 250424650 -263204 + MIR SINE MIR 45 169 -93 339 402 22 0 chr2 250424800 250424979 -262875 - L1ME3A LINE L1 -2631 3515 3333 12785 148 58 22 chr2 250424984 250429883 -257971 - L1MA3 LINE L1 -5 7719 2643 2968 157 88 7 chr2 250429983 250430539 -257315 - L1MA3 LINE L1 -6951 614 14 217 118 0 0 chr2 250430652 250430686 -257168 + (TC)n Simple_repeat Simple_repeat 1 34 0 252 86 0 0 chr2 250430686 250430721 -257133 + (TTCC)n Simple_repeat Simple_repeat 1 35 0 291 179 0 0 chr2 250430721 250430790 -257064 - Alu SINE Alu 0 302 251 387 303 24 50 chr2 250430963 250431096 -256758 - L1ME3A LINE L1 -3095 3051 2916 1990 122 49 83 chr2 250431096 250431482 -256372 - THE1C LTR MaLR 0 375 3 387 303 24 50 chr2 250431482 250431688 -256166 - L1ME3A LINE L1 -3230 2916 2721 222 342 88 26 chr2 250432014 250432128 -255726 + MIR SINE MIR 121 241 -21 306 364 77 43 chr2 250432893 250433217 -254637 - HAL1b LINE L1 -680 668 334 211 389 19 6 chr2 250434506 250434663 -253191 + MIR SINE MIR 6 164 -98 1054 289 83 34 chr2 250436614 250437082 -250772 + MLT1F1 LTR MaLR 68 558 -9 237 287 32 32 chr2 250439145 250439239 -248615 + L1P LINE L1 4879 4972 -1174 2580 109 28 8 chr2 250440063 250440420 -247434 + THE1B LTR MaLR 1 364 0 343 293 126 53 chr2 250440761 250441348 -246506 - L1ME4a LINE L1 -6 6115 5486 637 215 22 0 chr2 250443124 250443259 -244595 + Charlie4 DNA MER1_type 1824 1961 0 386 345 17 6 chr2 250444440 250444617 -243237 + MIR SINE MIR 63 241 -21 217 263 11 84 chr2 250445238 250445428 -242426 + G-rich Low_complexity Low_complexity 1 176 0 328 293 30 6 chr2 250445455 250445622 -242232 + G-rich Low_complexity Low_complexity 6 176 0 187 267 35 69 chr2 250447037 250447153 -240701 + L2 LINE L2 3158 3269 -3 2332 91 0 0 chr2 250447545 250447852 -240002 - AluY SINE Alu -4 307 1 747 285 64 36 chr2 250449169 250449441 -238413 - L1MEd LINE L1 -1094 1396 1016 2304 132 66 0 chr2 250449441 250449805 -238049 - MLT1B LTR MaLR 0 390 3 747 285 64 36 chr2 250449805 250449945 -237909 - L1MEd LINE L1 -1474 1016 881 1613 170 30 7 chr2 250449946 250450217 -237637 + AluJb SINE Alu 2 278 -34 387 0 0 0 chr2 250450217 250450260 -237594 + (CA)n Simple_repeat Simple_repeat 2 44 0 333 266 71 104 chr2 250450619 250450817 -237037 + L1MC4a LINE L1 5612 5794 -2014 279 0 0 0 chr2 250450817 250450848 -237006 + (TG)n Simple_repeat Simple_repeat 1 31 0 333 266 71 104 chr2 250450848 250451003 -236851 + L1MC4a LINE L1 5794 5953 -1855 226 222 111 37 chr2 250451582 250451690 -236164 - L2 LINE L2 -206 3066 2951 191 347 42 11 chr2 250451726 250451821 -236033 - L2 LINE L2 -16 3256 3159 272 211 14 0 chr2 250453814 250453885 -233969 + GA-rich Low_complexity Low_complexity 1 72 0 546 316 102 24 chr2 250454525 250454899 -232955 + L1MC4a LINE L1 2335 2737 -3409 343 264 149 17 chr2 250455153 250455388 -232466 + L1MC4a LINE L1 3634 3899 -2247 306 303 28 31 chr2 250455376 250455510 -232344 + L1MC4a LINE L1 5691 5733 -430 * 2708 10 0 3 chr2 250455510 250455818 -232036 + AluY SINE Alu 1 307 -4 306 303 28 31 chr2 250455818 250455909 -231945 + L1MC4a LINE L1 5733 5823 -340 1740 155 38 31 chr2 250460808 250461125 -226729 + THE1B LTR MaLR 46 364 0 478 229 121 19 chr2 250462155 250462312 -225542 + MLT1E LTR MaLR 58 230 -363 888 229 53 0 chr2 250462321 250462565 -225289 + MLT1E LTR MaLR 333 589 -4 2093 128 3 12 chr2 250465223 250465559 -222295 + MER1B DNA MER1_type 1 333 -4 1748 125 52 78 chr2 250467749 250468133 -219721 - THE1C LTR MaLR -1 374 1 336 244 0 0 chr2 250469428 250469518 -218336 + (TG)n Simple_repeat Simple_repeat 1 90 0 262 158 0 35 chr2 250469518 250469575 -218279 + MER4-int LTR ERV1 1112 1166 -5432 738 252 0 0 chr2 250469575 250469931 -217923 + (TG)n Simple_repeat Simple_repeat 1 356 0 249 210 0 0 chr2 250469993 250470055 -217799 + (TG)n Simple_repeat Simple_repeat 1 62 0 256 289 24 0 chr2 250470072 250470155 -217699 + (TATG)n Simple_repeat Simple_repeat 3 87 0 200 225 0 96 chr2 250473537 250473715 -214139 + (CTA)n Simple_repeat Simple_repeat 2 162 0 274 294 248 11 chr2 250475980 250476262 -211592 - L2 LINE L2 0 3272 2924 470 210 43 58 chr2 250476431 250476569 -211285 + HAL1 LINE L1 5 140 -2367 702 302 94 3 chr2 250476637 250476935 -210919 + HAL1 LINE L1 1283 1607 -900 616 200 15 5 chr2 250477213 250477412 -210442 + L1M4 LINE L1 2838 3083 -3063 490 218 164 0 chr2 250477413 250477523 -210331 + FRAM SINE Alu 1 128 -48 393 170 50 0 chr2 250477539 250477639 -210215 + GA-rich Low_complexity Low_complexity 3 107 0 1143 278 77 33 chr2 250477639 250478178 -209676 + L1M4 LINE L1 3073 3649 -2497 315 0 0 0 chr2 250478178 250478213 -209641 + (CCCTAA)n Simple_repeat Simple_repeat 3 37 0 1143 278 77 33 chr2 250478213 250478346 -209508 + L1M4 LINE L1 3649 3775 -2371 220 175 35 0 chr2 250478346 250478403 -209451 + (TA)n Simple_repeat Simple_repeat 2 60 0 1499 256 44 44 chr2 250478403 250479182 -208672 + L1M4 LINE L1 3696 4474 -1672 1316 254 177 29 chr2 250479395 250479893 -207961 + HAL1 LINE L1 1632 2055 -452 270 116 0 0 chr2 250479893 250479936 -207918 + (TG)n Simple_repeat Simple_repeat 1 43 0 222 37 0 0 chr2 250479935 250479962 -207892 + (GA)n Simple_repeat Simple_repeat 1 27 0 * 1316 254 177 29 chr2 250479936 250480226 -207628 + HAL1 LINE L1 2055 2507 0 202 223 43 43 chr2 250480297 250480391 -207463 - L2 LINE L2 -661 2653 2560 690 208 60 108 chr2 250480525 250480794 -207060 + MLT1A1 LTR MaLR 1 256 -109 248 189 34 91 chr2 250482321 250482496 -205358 + (TGGG)n Simple_repeat Simple_repeat 2 166 0 * 291 288 24 29 chr2 250482397 250482567 -205287 + G-rich Low_complexity Low_complexity 4 172 0 1457 249 72 5 chr2 250484830 250485247 -202607 + LTR56 LTR ERV1 1 445 0 1233 299 67 35 chr2 250488058 250488990 -198864 + L1ME2 LINE L1 656 1616 -4780 3129 244 101 13 chr2 250489005 250490120 -197734 + L1ME2 LINE L1 3470 4683 -1532 1721 303 66 12 chr2 250490129 250490716 -197138 + L1PA16 LINE L1 1 619 -6168 4877 251 30 17 chr2 250491204 250492697 -195157 + L1PA16 LINE L1 1343 2937 -3860 2152 119 41 0 chr2 250492697 250492992 -194862 + AluY SINE Alu 1 307 -4 4877 251 30 17 chr2 250492992 250493639 -194215 + L1PA16 LINE L1 2937 3574 -3223 5299 179 20 11 chr2 250493647 250495504 -192350 + L1PA16 LINE L1 4941 6814 -3 1158 274 40 14 chr2 250495502 250495733 -192121 + L1ME2 LINE L1 4669 4892 -1323 * 459 167 22 0 chr2 250495733 250495823 -192031 - L1MB5 LINE L1 -6 6168 6077 1158 274 40 14 chr2 250495823 250496037 -191817 + L1ME2 LINE L1 4892 5126 -1089 1824 211 56 15 chr2 250496269 250496733 -191121 + L1ME2 LINE L1 5469 5951 -282 2015 148 119 8 chr2 250496747 250497132 -190722 - MSTA LTR MaLR 0 428 1 9412 136 6 33 chr2 250497132 250498754 -189100 - MSTA-int LTR MaLR 0 1580 3 1610 174 171 8 chr2 250498756 250499124 -188730 - MSTA LTR MaLR 0 428 1 2759 179 2 2 chr2 250499125 250499601 -188253 - MER66B LTR ERV1 -10 476 1 755 253 18 48 chr2 250499601 250499874 -187980 + L1ME2 LINE L1 5948 6212 -21 198 250 0 0 chr2 250503095 250503151 -184703 + (TG)n Simple_repeat Simple_repeat 1 56 0 501 266 68 6 chr2 250503799 250503976 -183878 + MER20 DNA MER1_type 32 219 0 640 215 147 41 chr2 250504002 250504406 -183448 - LTR54B LTR ERV1 -2 496 22 24 32 0 0 chr2 250504649 250504680 -183174 + AT_rich Low_complexity Low_complexity 1 31 0 1869 154 18 84 chr2 250505841 250505948 -181906 + MLT2D LTR ERVL 3 115 -299 2176 116 0 0 chr2 250505948 250506242 -181612 + AluSg SINE Alu 3 296 -14 1869 154 18 84 chr2 250506242 250506575 -181279 + MLT2D LTR ERVL 115 414 0 946 231 129 72 chr2 250506591 250507094 -180760 + MLT1F LTR MaLR 11 542 0 1241 284 98 61 chr2 250507144 250508322 -179532 - HAL1 LINE L1 -291 2216 996 230 278 56 0 chr2 250508490 250508562 -179292 - MIR SINE MIR -107 155 80 539 143 0 0 chr2 250509071 250509162 -178692 - MIR SINE MIR -113 149 59 542 138 25 31 chr2 250512155 250512314 -175540 + (CA)n Simple_repeat Simple_repeat 1 158 0 416 220 21 23 chr2 250512335 250512680 -175174 + (CA)n Simple_repeat Simple_repeat 1 344 0 579 189 28 44 chr2 250513506 250513686 -174168 + MER53 DNA DNA 1 177 -12 554 274 80 5 chr2 250515281 250515493 -172361 + MSTD LTR MaLR 142 369 -27 391 285 102 7 chr2 250515938 250516075 -171779 + MER5B DNA MER1_type 29 178 0 472 190 78 42 chr2 250516084 250516226 -171628 + MER5A DNA MER1_type 17 163 -26 190 247 59 106 chr2 250516101 250516271 -171583 - MER5A DNA MER1_type -27 162 1 * 347 261 275 0 chr2 250516285 250516427 -171427 + MER5A DNA MER1_type 9 189 0 225 262 123 16 chr2 250517088 250517210 -170644 + MLT2E LTR ERVL 188 322 -306 462 270 115 0 chr2 250517716 250517942 -169912 + MER68 LTR ERV1 131 382 -180 249 139 38 165 chr2 250517937 250518016 -169838 + MER68 LTR ERV1 494 562 0 * 580 324 10 5 chr2 250518018 250518225 -169629 + ERVL LTR ERVL 428 635 -5129 423 263 51 46 chr2 250520836 250521011 -166843 - MIR SINE MIR -54 208 33 186 291 25 13 chr2 250521280 250521359 -166495 + L3 LINE CR1 1399 1478 -99 1469 210 82 2 chr2 250521715 250522115 -165739 - MER31A LTR ERV1 -53 432 1 326 278 11 22 chr2 250522138 250522228 -165626 + CT-rich Low_complexity Low_complexity 5 93 0 1833 263 52 17 chr2 250522278 250522936 -164918 - L1MB3 LINE L1 -29 6154 5474 1290 251 166 8 chr2 250523719 250524202 -163652 - MER90 LTR ERV1 -16 559 1 229 222 24 119 chr2 250526738 250526864 -160990 - L2 LINE L2 -233 3039 2926 1748 169 14 10 chr2 250530207 250530497 -157357 + AluJo SINE Alu 1 291 -21 860 180 16 38 chr2 250531996 250532179 -155675 - MLT1A1 LTR MaLR -186 179 1 926 212 80 0 chr2 250533264 250533476 -154378 - MER7A DNA MER2_type -1 335 107 1496 209 181 4 chr2 250533476 250533941 -153913 + LTR64 LTR ERVK 1 547 -11 523 252 0 8 chr2 250533949 250534072 -153782 - MER7A DNA MER2_type -226 120 1 308 333 60 0 chr2 250534140 250534257 -153597 + L1 LINE L1 2525 2648 -3498 4385 60 2 3 chr2 250535817 250536418 -151436 - L1PA5 LINE L1 -796 5350 4751 6355 47 7 1 chr2 250536418 250537228 -150626 + L1PA5 LINE L1 5328 6143 -11 186 43 0 0 chr2 250537231 250537254 -150600 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 350 263 55 9 chr2 250537872 250537994 -149860 + MIR SINE MIR 41 166 -62 847 245 41 124 chr2 250537995 250538574 -149280 + L1ME LINE L1 5152 5678 -492 363 23 0 0 chr2 250538574 250538618 -149236 + (CA)n Simple_repeat Simple_repeat 1 44 0 847 245 41 124 chr2 250538618 250538674 -149180 + L1ME LINE L1 5678 5737 -433 2039 238 56 21 chr2 250538675 250539721 -148133 + L1ME2 LINE L1 4805 5894 -270 1492 256 40 15 chr2 250539719 250540122 -147732 + MLT1B-int LTR MaLR 1320 1732 -3 * 1488 161 114 44 chr2 250540125 250540247 -147607 + MLT1B LTR MaLR 1 113 -277 2288 107 3 3 chr2 250540247 250540555 -147299 + AluSq SINE Alu 5 312 -1 1488 161 114 44 chr2 250540555 250540793 -147061 + MLT1B LTR MaLR 113 386 -4 1470 219 76 29 chr2 250540809 250541328 -146526 - L1ME LINE L1 -425 5724 5185 540 262 11 80 chr2 250541335 250541522 -146332 + MLT1E LTR MaLR 5 178 -364 812 246 12 127 chr2 250541533 250541936 -145918 + MLT1F1-int LTR MaLR 991 1347 -24 521 249 220 13 chr2 250541943 250542021 -145833 + MLT1F1 LTR MaLR 105 166 -401 186 43 0 0 chr2 250542021 250542044 -145810 + (TC)n Simple_repeat Simple_repeat 2 24 0 521 249 220 13 chr2 250542044 250542335 -145519 + MLT1F1 LTR MaLR 166 565 -2 1267 238 45 11 chr2 250542338 250542783 -145071 - L1ME LINE L1 -1468 4661 4202 419 276 80 30 chr2 250542795 250542994 -144860 + L1ME LINE L1 5579 5787 -375 4049 264 57 19 chr2 250543095 250544004 -143850 + L1MEc LINE L1 2112 2985 -3230 1187 210 18 85 chr2 250544004 250544404 -143450 + MLT1A2 LTR MaLR 1 373 -1 4049 264 57 19 chr2 250544404 250545367 -142487 + L1MEc LINE L1 2985 4026 -2189 1218 281 20 32 chr2 250545484 250545886 -141968 - L1ME LINE L1 -2052 4077 3681 633 249 49 20 chr2 250546037 250546061 -141793 + L1MDa LINE L1 2272 2294 -4246 4101 51 16 2 chr2 250546061 250546611 -141243 + LTR6B LTR ERV1 1 558 0 633 249 49 20 chr2 250546611 250546831 -141023 + L1MDa LINE L1 2294 2523 -4017 202 276 69 11 chr2 250546831 250546918 -140936 + MER5A DNA MER1_type 53 144 -45 2645 43 3 0 chr2 250547197 250547502 -140352 + AluY SINE Alu 6 311 0 1671 117 7 62 chr2 250548094 250548302 -139552 - AluSx SINE Alu -53 259 68 3686 106 60 2 chr2 250548302 250548849 -139005 + LTR19B LTR ERV1 2 580 0 1671 117 7 62 chr2 250548849 250548914 -138940 - AluSx SINE Alu -244 68 1 389 310 71 45 chr2 250548916 250549184 -138670 - L1ME LINE L1 -4729 1581 1307 572 299 57 15 chr2 250549199 250549534 -138320 - L1ME LINE L1 -4869 1250 902 298 334 70 39 chr2 250549949 250550467 -137387 - L1ME2 LINE L1 -213 5951 5418 378 296 33 45 chr2 250550536 250550779 -137075 - L1ME2 LINE L1 -1498 4648 4409 253 204 0 0 chr2 250550776 250550825 -137029 - L1M4 LINE L1 -605 5973 5925 * 1010 72 0 0 chr2 250550825 250550950 -136904 + AluY SINE Alu 173 297 -14 3088 218 76 15 chr2 250550950 250551581 -136273 - L1M4 LINE L1 -654 5902 5311 2168 113 3 0 chr2 250551581 250551889 -135965 + AluSp SINE Alu 1 309 0 3088 218 76 15 chr2 250551889 250552513 -135341 - L1M4 LINE L1 -1245 5311 4561 321 223 58 0 chr2 250552567 250552664 -135190 - L1M4 LINE L1 -1947 4593 4492 197 330 75 0 chr2 250553132 250553226 -134628 - L2 LINE L2 -26 3246 3146 401 293 27 14 chr2 250554357 250554504 -133350 - L1MC4a LINE L1 -1945 5863 5715 275 344 53 40 chr2 250557542 250557769 -130085 - L2 LINE L2 -213 3059 2830 189 107 0 0 chr2 250560588 250560616 -127238 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 474 250 34 57 chr2 250560617 250560793 -127061 - L2 LINE L2 -25 3288 3117 838 215 20 20 chr2 250560806 250561001 -126853 + MLT1D LTR MaLR 3 197 -308 7404 177 9 26 chr2 250561003 250563133 -124721 + L1MA4 LINE L1 6 2102 -4065 949 250 110 17 chr2 250563782 250564255 -123599 - L1MEc LINE L1 -3589 2951 2482 1960 217 139 65 chr2 250564698 250564765 -123089 - L1MC4 LINE L1 -144 7898 7837 391 239 132 42 chr2 250564765 250564932 -122922 + MER5A DNA MER1_type 4 185 -4 1960 217 139 65 chr2 250564932 250565669 -122185 - L1MC4 LINE L1 -205 7837 7034 428 304 87 0 chr2 250565675 250565836 -122018 - L1MC4 LINE L1 -1396 6646 6472 266 307 18 0 chr2 250565978 250566092 -121762 - L1MEc LINE L1 -4620 1920 1805 2105 96 0 7 chr2 250566299 250566571 -121283 - AluSx SINE Alu -8 304 35 545 261 101 93 chr2 250566629 250567176 -120678 - L1MEc LINE L1 -4937 1593 1043 665 179 40 13 chr2 250567811 250567962 -119892 - L1MC3 LINE L1 -1 7784 7630 207 0 0 0 chr2 250567973 250567996 -119858 + (T)n Simple_repeat Simple_repeat 1 23 0 16354 175 28 13 chr2 250568496 250571977 -115877 + L1MA4 LINE L1 2187 5738 -743 1128 139 0 6 chr2 250571977 250572150 -115704 - L1 LINE L1 -1887 4259 4088 4230 151 22 13 chr2 250572150 250572888 -114966 + L1MA4 LINE L1 5721 6482 0 196 301 132 42 chr2 250573124 250573317 -114537 - L2 LINE L2 -302 3011 2802 1081 187 39 9 chr2 250574475 250574705 -113149 + L1MD3 LINE L1 7758 7994 -1 209 315 150 5 chr2 250575359 250575559 -112295 + L2 LINE L2 2236 2464 -850 21 36 0 0 chr2 250577227 250577255 -110599 + AT_rich Low_complexity Low_complexity 1 28 0 746 300 100 12 chr2 250577273 250577603 -110251 - L1ME3A LINE L1 -15 6950 6592 518 195 18 44 chr2 250577791 250577904 -109950 - MER7A DNA MER2_type -238 108 1 758 250 4 42 chr2 250577906 250578142 -109712 - L1ME3A LINE L1 -1291 5650 5424 2395 70 0 23 chr2 250578244 250578545 -109309 - AluY SINE Alu -17 294 1 416 239 239 13 chr2 250578554 250578792 -109062 - L1ME3A LINE L1 -4237 2885 2594 201 255 20 0 chr2 250578843 250578894 -108960 + MIR SINE MIR 205 256 -6 4427 60 4 15 chr2 250579308 250579855 -107999 + L1PA7 LINE L1 5613 6153 -1 33 0 0 0 chr2 250579858 250579891 -107963 + AT_rich Low_complexity Low_complexity 1 33 0 858 262 107 60 chr2 250579902 250580349 -107505 - L1MCc LINE L1 -1911 5030 4563 258 32 0 0 chr2 250580369 250580400 -107454 + (CA)n Simple_repeat Simple_repeat 2 32 0 1388 179 29 29 chr2 250580422 250580695 -107159 - AluJb SINE Alu -3 309 37 889 327 80 9 chr2 250580708 250581359 -106495 - L1MCc LINE L1 -2386 4555 3859 648 257 67 45 chr2 250581507 250581949 -105905 - L1MCc LINE L1 -4910 2021 1297 25 51 0 0 chr2 250582316 250582355 -105499 + AT_rich Low_complexity Low_complexity 1 39 0 319 307 45 16 chr2 250582419 250582637 -105217 - L1MEc LINE L1 -3856 2359 2182 497 300 131 63 chr2 250584694 250585096 -102758 + MLT1J LTR MaLR 1 439 -72 2067 87 40 4 chr2 250585096 250585373 -102481 + AluSc SINE Alu 1 287 -22 497 300 131 63 chr2 250585373 250585427 -102427 + MLT1J LTR MaLR 439 488 -23 621 263 113 24 chr2 250585486 250585733 -102121 + MLT1L LTR MaLR 339 607 -8 328 309 171 13 chr2 250585885 250586189 -101665 + L1M4 LINE L1 4951 5302 -844 913 80 0 0 chr2 250586210 250586323 -101531 + AluYb8 SINE Alu 1 113 -205 180 0 0 0 chr2 250586359 250586379 -101475 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1964 163 0 0 chr2 250586872 250587172 -100682 + AluJb SINE Alu 1 300 -12 2282 94 7 0 chr2 250587721 250588018 -99836 - AluSx SINE Alu -13 299 1 242 285 13 72 chr2 250588243 250588446 -99408 - L1MC/D LINE L1 -808 5483 5332 3930 272 67 84 chr2 250588623 250588663 -99191 + L1M4 LINE L1 14 53 -6772 2055 115 23 13 chr2 250588663 250588968 -98886 + AluSx SINE Alu 1 308 -4 3930 272 67 84 chr2 250588968 250590254 -97600 + L1M4 LINE L1 53 1359 -5466 317 93 19 0 chr2 250590254 250590308 -97546 + (TA)n Simple_repeat Simple_repeat 1 55 0 3930 272 67 84 chr2 250590308 250591404 -96450 + L1M4 LINE L1 1359 2515 -4310 1756 223 179 5 chr2 250591404 250591834 -96020 - MLT1D LTR MaLR 0 505 1 3930 272 67 84 chr2 250591834 250592025 -95829 + L1M4 LINE L1 2515 2708 -4117 2295 95 0 0 chr2 250592321 250592615 -95239 - AluSq SINE Alu -19 294 1 351 0 0 0 chr2 250592758 250592797 -95057 + (TG)n Simple_repeat Simple_repeat 1 39 0 1240 157 117 9 chr2 250593181 250593411 -94443 + AluJo SINE Alu 39 293 -19 949 229 90 70 chr2 250593429 250593547 -94307 + MLT2C2 LTR ERVL 1 115 -349 2231 43 0 11 chr2 250593547 250593824 -94030 + AluY SINE Alu 1 274 -37 249 83 0 0 chr2 250593829 250593865 -93989 + (CAA)n Simple_repeat Simple_repeat 1 36 0 949 229 90 70 chr2 250593865 250594142 -93712 + MLT2C2 LTR ERVL 118 410 -54 287 246 0 0 chr2 250594788 250594853 -93001 - Charlie8 DNA MER1_type -1937 480 416 489 251 187 18 chr2 250594959 250595130 -92724 - Charlie8 DNA MER1_type -2151 266 67 10906 186 18 15 chr2 250595131 250596867 -90987 - L1PB3 LINE L1 -2 6868 5139 225 65 0 0 chr2 250596867 250596898 -90956 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 10906 186 18 15 chr2 250596898 250598548 -89306 - L1PB3 LINE L1 -1731 5139 3470 1834 175 10 0 chr2 250598548 250598840 -89014 + AluJb SINE Alu 1 295 -17 10906 186 18 15 chr2 250598840 250599414 -88440 - L1PB3 LINE L1 -3400 3470 2899 692 107 98 9 chr2 250599415 250599527 -88327 - AluSg/x SINE Alu -15 297 176 6978 214 148 16 chr2 250599527 250599605 -88249 - L1PB3 LINE L1 -3985 2878 2812 240 35 0 0 chr2 250599605 250599634 -88220 + (TG)n Simple_repeat Simple_repeat 2 30 0 6978 214 148 16 chr2 250599634 250601564 -86290 - L1PB3 LINE L1 -4051 2812 604 703 298 58 19 chr2 250602123 250602552 -85302 - L1PB3 LINE L1 -6415 448 3 705 201 113 32 chr2 250603274 250603558 -84296 - L1MC5 LINE L1 -50 7911 7605 210 171 0 0 chr2 250603665 250603706 -84148 + CT-rich Low_complexity Low_complexity 2 42 0 6248 116 18 47 chr2 250603810 250605307 -82547 + L1PA10 LINE L1 4271 6164 -4 483 232 99 73 chr2 250605321 250605469 -82385 - L1MC5 LINE L1 -504 7457 7314 2141 130 0 0 chr2 250605469 250605791 -82063 - AluSx SINE Alu 0 322 1 483 232 99 73 chr2 250605791 250605943 -81911 - L1MC5 LINE L1 -647 7314 7148 1485 130 17 0 chr2 250605951 250606189 -81665 - L1PA16 LINE L1 -8 6158 5917 476 152 33 0 chr2 250606304 250606396 -81458 - L1PA16 LINE L1 -623 5538 5444 * 546 215 91 83 chr2 250606395 250606660 -81194 - L1MC5 LINE L1 -789 7172 6906 2218 99 0 0 chr2 250606667 250606950 -80904 - AluSc SINE Alu -26 283 1 251 216 39 0 chr2 250607016 250607067 -80787 - L1MC4 LINE L1 -1064 6978 6926 872 318 137 37 chr2 250607195 250608037 -79817 + L2 LINE L2 2050 2975 -339 266 274 41 83 chr2 250608679 250608945 -78909 - L1MC4 LINE L1 -1880 5928 5674 212 242 0 0 chr2 250609500 250609562 -78292 + (TGGG)n Simple_repeat Simple_repeat 1 62 0 4204 189 62 37 chr2 250609909 250610957 -76897 - L1MC3 LINE L1 -753 5393 5271 400 195 37 81 chr2 250611034 250611225 -76629 - L1ME LINE L1 -303 5818 5639 23 0 0 0 chr2 250611418 250611441 -76413 + AT_rich Low_complexity Low_complexity 1 23 0 261 289 13 50 chr2 250611831 250611990 -75864 - L2 LINE L2 -920 2394 2242 222 136 0 0 chr2 250612055 250612099 -75755 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 359 220 21 71 chr2 250612138 250612279 -75575 - L2 LINE L2 -43 3270 3137 37 0 0 0 chr2 250612629 250612666 -75188 + AT_rich Low_complexity Low_complexity 1 37 0 2924 3 0 3 chr2 250614878 250615190 -72664 - AluYa5 SINE Alu 0 311 1 259 81 27 0 chr2 250615310 250615347 -72507 - MER75 DNA T2_type -4 510 473 225 329 14 0 chr2 250615386 250615456 -72398 - L2 LINE L2 -8 3305 3235 212 322 22 22 chr2 250617072 250617162 -70692 - L2 LINE L2 -11 3302 3213 44 0 0 0 chr2 250618650 250618694 -69160 + AT_rich Low_complexity Low_complexity 1 44 0 935 133 0 14 chr2 250618711 250618854 -69000 - AluJb SINE Alu -171 141 1 187 317 0 0 chr2 250619546 250619606 -68248 + MIR SINE MIR 81 140 -68 1761 44 0 5 chr2 250620622 250620826 -67028 - AluY SINE Alu -11 300 98 188 241 76 51 chr2 250621885 250621964 -65890 - L2 LINE L2 -22 3250 3170 540 226 0 22 chr2 250622133 250622270 -65584 - L1MB8 LINE L1 -1 6177 6044 477 311 62 5 chr2 250622328 250622521 -65333 - L2 LINE L2 -15 3298 3095 1953 141 0 27 chr2 250628685 250628983 -58871 + AluJb SINE Alu 1 290 -22 286 335 204 3 chr2 250629319 250629701 -58153 - L2 LINE L2 -2 3311 2853 213 333 30 0 chr2 250629715 250629847 -58007 + (CAGGG)n Simple_repeat Simple_repeat 3 138 0 303 219 14 0 chr2 250629874 250629947 -57907 - L2 LINE L2 -536 2778 2705 210 299 13 13 chr2 250630568 250630645 -57209 + L2 LINE L2 3194 3270 -2 1662 180 28 3 chr2 250631195 250631479 -56375 + AluJb SINE Alu 1 291 -21 257 250 179 9 chr2 250631674 250631786 -56068 + MIR3 SINE MIR 29 159 -49 2309 97 7 3 chr2 250631985 250632293 -55561 - AluSq SINE Alu -4 309 1 574 274 22 6 chr2 250632773 250632952 -54902 + MIR SINE MIR 63 244 -18 4078 152 117 12 chr2 250633363 250634468 -53386 - Tigger3(Golem) DNA MER2_type -1 3028 1 518 241 41 0 chr2 250634618 250634763 -53091 - LTR33 LTR ERVL -7 514 364 291 254 73 18 chr2 250634914 250635024 -52830 - LTR33 LTR ERVL -399 122 7 1017 253 81 52 chr2 250635423 250635869 -51985 - MER68 LTR ERV1 -86 476 18 234 254 146 42 chr2 250635975 250636140 -51714 - L2 LINE L2 -2169 1145 964 521 242 219 17 chr2 250636432 250636610 -51244 + MER58C DNA MER1_type 1 214 -1 313 247 113 27 chr2 250636963 250637113 -50741 - L1MCa LINE L1 -2867 3559 3397 845 174 74 157 chr2 250637415 250637647 -50207 - MER2 DNA MER2_type -1 344 149 1510 81 85 0 chr2 250637647 250637858 -49996 + MER30 DNA MER1_type 1 229 -1 845 174 74 157 chr2 250637858 250637975 -49879 - MER2 DNA MER2_type -196 149 24 1936 211 67 104 chr2 250638009 250639278 -48576 - L1MCa LINE L1 -3135 3291 2066 1583 193 17 14 chr2 250639278 250639573 -48281 - AluSx SINE Alu -16 296 1 3443 118 25 19 chr2 250639866 250640390 -47464 - MER1A DNA MER1_type 0 527 1 478 332 10 5 chr2 250645601 250645797 -42057 + L1ME3 LINE L1 5931 6127 -35 260 266 81 77 chr2 250646193 250646247 -41607 - L1M4 LINE L1 -1489 4657 4605 2370 95 0 3 chr2 250646247 250646541 -41313 + AluSq SINE Alu 1 293 -20 260 266 81 77 chr2 250646541 250646734 -41120 - L1M4 LINE L1 -1541 4605 4409 879 285 85 57 chr2 250646787 250648046 -39808 + L1ME3 LINE L1 4779 6068 -94 255 114 0 0 chr2 250648103 250648147 -39707 + (TA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr2 250648403 250648424 -39430 + AT_rich Low_complexity Low_complexity 1 21 0 576 305 67 9 chr2 250648739 250648949 -38905 + MIR SINE MIR 25 246 -16 2058 130 0 3 chr2 250649847 250650132 -37722 + AluY SINE Alu 1 284 -27 273 57 0 0 chr2 250650133 250650168 -37686 + (CA)n Simple_repeat Simple_repeat 2 36 0 240 35 0 0 chr2 250650221 250650250 -37604 + (GA)n Simple_repeat Simple_repeat 2 30 0 558 107 45 40 chr2 250651246 250651423 -36431 + GA-rich Low_complexity Low_complexity 2 179 0 180 292 0 0 chr2 250654163 250654211 -33643 - L2 LINE L2 0 3313 3266 219 190 0 0 chr2 250654851 250654909 -32945 + L3 LINE CR1 1413 1470 -107 198 0 0 0 chr2 250655563 250655585 -32269 + (A)n Simple_repeat Simple_repeat 1 22 0 194 235 88 0 chr2 250655705 250655773 -32081 + MER5A DNA MER1_type 9 82 -107 185 300 29 0 chr2 250656794 250656864 -30990 + MIR SINE MIR 34 105 -103 2130 149 0 0 chr2 250656983 250657291 -30563 - AluSx SINE Alu -4 308 1 1501 199 128 13 chr2 250657292 250657683 -30171 - L1MC3 LINE L1 -164 7621 7186 21 36 0 0 chr2 250659401 250659429 -28425 + AT_rich Low_complexity Low_complexity 1 28 0 259 271 146 43 chr2 250659735 250660015 -27839 - L1MEd LINE L1 -5190 929 621 342 169 91 0 chr2 250660018 250660095 -27759 - MER53 DNA DNA -1 188 105 290 331 42 6 chr2 250660144 250660310 -27544 - L1MEd LINE L1 -5491 628 457 328 246 240 11 chr2 250660446 250660621 -27233 - L1MEd LINE L1 -5900 219 5 343 282 55 9 chr2 250661015 250661125 -26729 - L2 LINE L2 -39 3274 3160 226 322 89 43 chr2 250661287 250661635 -26219 - L2 LINE L2 -385 2929 2566 215 330 99 21 chr2 250662731 250662964 -24890 - L2 LINE L2 -1211 2103 1853 202 306 65 19 chr2 250662992 250663100 -24754 - L2 LINE L2 -1606 1708 1596 180 293 172 9 chr2 250665672 250665788 -22066 - MIR SINE MIR -105 157 23 1254 152 70 8 chr2 250665857 250666100 -21754 - MSTA LTR MaLR 0 428 171 1112 152 17 0 chr2 250666561 250666739 -21115 - MSTA LTR MaLR -227 199 19 2071 134 7 7 chr2 250667017 250667323 -20531 + AluSx SINE Alu 5 310 -2 263 215 15 0 chr2 250669006 250669071 -18783 + (TA)n Simple_repeat Simple_repeat 2 67 0 297 0 0 0 chr2 250669071 250669104 -18750 + (CA)n Simple_repeat Simple_repeat 2 34 0 952 123 36 0 chr2 250670884 250671022 -16832 - FRAM SINE Alu -30 146 4 2141 252 110 33 chr2 250671027 250672097 -15757 + L1M4 LINE L1 3373 4525 -1621 690 282 89 23 chr2 250672258 250672772 -15082 + L1ME1 LINE L1 1941 2482 -3733 820 278 79 16 chr2 250672820 250673072 -14782 + LTR40a LTR ERVL 252 519 0 2346 224 96 14 chr2 250673073 250673810 -14044 + L1ME1 LINE L1 5428 6225 -10 197 108 27 0 chr2 250673892 250673929 -13925 + (CA)n Simple_repeat Simple_repeat 1 38 0 1344 242 22 48 chr2 250673954 250674450 -13404 - L1M4 LINE L1 -1213 4933 4451 322 311 75 27 chr2 250674838 250675131 -12723 + ERVL LTR ERVL 2416 2722 -3042 195 289 0 0 chr2 250675481 250675533 -12321 - L2 LINE L2 -229 3043 2992 3468 249 23 81 chr2 250675609 250676837 -11017 + MER21-int LTR ERV1 1946 3102 -1089 3059 171 9 23 chr2 250676859 250677259 -10595 + MER41D LTR ERV1 9 400 -157 2217 128 0 0 chr2 250677259 250677556 -10298 - AluSx SINE Alu -15 297 1 3059 171 9 23 chr2 250677556 250677710 -10144 + MER41D LTR ERV1 400 555 -2 302 350 49 0 chr2 250677720 250677843 -10011 + L1ME LINE L1 5318 5446 -724 894 277 145 0 chr2 250677866 250678340 -9514 - L1MC4 LINE L1 -651 5591 5293 1320 151 27 0 chr2 250678348 250678567 -9287 - AluJb SINE Alu -1 311 87 191 264 111 42 chr2 250678704 250678776 -9078 + L2 LINE L2 3032 3108 -164 216 206 0 44 chr2 250680109 250680177 -7677 + CT-rich Low_complexity Low_complexity 1 65 0 532 299 112 36 chr2 250681622 250682043 -5811 + L2 LINE L2 2841 3293 -20 219 312 13 0 chr2 250682115 250682192 -5662 + L2 LINE L2 2295 2372 -942 299 266 0 25 chr2 250683457 250683536 -4318 - Charlie8 DNA MER1_type -2249 168 92 2066 93 43 11 chr2 250683714 250683993 -3861 + AluSx SINE Alu 9 296 -16 35 0 0 0 chr2 250684377 250684412 -3442 + AT_rich Low_complexity Low_complexity 1 35 0 441 320 166 37 chr2 250684458 250685278 -2576 - L1MC4 LINE L1 -1438 4708 3624 2229 114 3 16 chr2 250686060 250686376 -1478 - AluSx SINE Alu 0 312 1 246 28 0 28 chr2 250686595 250686631 -1223 + MADE1 DNA Mariner 46 80 0 497 318 81 70 chr2 250687081 250687625 -229 - HAL1b LINE L1 -511 837 288